Mercurial > repos > pdeford > dotplot
changeset 0:a8fcdd1c2cce draft
Uploaded
| author | pdeford |
|---|---|
| date | Tue, 01 Nov 2016 15:19:49 -0400 |
| parents | |
| children | 9642674cbe9b |
| files | dotplot/._dotplot_chr4.png dotplot/dotplot.py dotplot/dotplot.xml dotplot/dotplot_chr4.png dotplot/test-data/._dotplot_chr4.pdf dotplot/test-data/._human_vs_chicken_chr4.tabular dotplot/test-data/dotplot_chr4.pdf dotplot/test-data/human_vs_chicken_chr4.tabular |
| diffstat | 8 files changed, 44671 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/dotplot/dotplot.py Tue Nov 01 15:19:49 2016 -0400 @@ -0,0 +1,55 @@ +#!/usr/bin/env python + +import matplotlib +matplotlib.use('Agg') +import matplotlib.pyplot as plt +import sys + +def main(): + input_file = open(sys.argv[1]) + filter = int(sys.argv[2]) + png_path = sys.argv[3] + + sizes = {} + alignments = {} + + for line in input_file: + fields = line.split() + r_start = int(fields[5]) + r_end = int(fields[6]) + q_start = int(fields[16]) + q_end = int(fields[17]) + contig_name = fields[9] + contig_size = int(fields[11]) + reference_size = int(fields[3]) + + if contig_name not in sizes: + sizes[contig_name] = contig_size + alignments[contig_name] = [] + + if abs(r_start - r_end) > filter: + alignments[contig_name].append([(r_start, r_end), (q_start, q_end)]) + + cumulative = 0 + + plt.figure() + yticks = [[], []] + for key in sorted(sizes.keys(), key=lambda x:sizes[x], reverse=True): + for reference, query in alignments[key]: + plt.plot(reference, [x + cumulative for x in query], 'k-', zorder=10) + yticks[0].append(cumulative + sizes[key]/2) + yticks[1].append("{} bp".format(sizes[key])) + cumulative += sizes[key] + plt.axhline(cumulative, zorder=1, color='lightgray', ) + + plt.xlim([0,reference_size]) + plt.ylim([0,cumulative]) + plt.yticks(*yticks) + plt.tick_params(axis='y', which='both',length=0) + plt.xlabel("Position in Reference (bp)") + plt.ylabel("Contigs by size") + plt.tight_layout() + plt.savefig(png_path, dpi=200, format='pdf') + +if __name__ == '__main__': + main() \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/dotplot/dotplot.xml Tue Nov 01 15:19:49 2016 -0400 @@ -0,0 +1,42 @@ +<tool id="lastz_dotplot_matplotlib" name="Dot Plot" version="1.0.0"> + <description>of LASTZ tabular output</description> + <requirements> + <requirement type="package">numpy</requirement> + <requirement type="package">matplotlib</requirement> + </requirements> + <command interpreter="python">dotplot.py $input $filter $outfile1</command> + <inputs> + <param name="input" type="data" format="tabular" label="LASTZ tabular output" help="Dataset missing? See TIP below"/> + <param name="filter" type="text" value="0" label="Filter out alignments shorter than (bp)"/> + </inputs> + <outputs> + <data format="pdf" name="out_file1"/> + </outputs> + <tests> + <test> + <param name="input" value="human_vs_chicken_chr4.tabular" ftype="tabular"/> + <param name="filter" value="100"/> + <output name="out_file1" file="dotplot_chr4.pdf" compare="sim_size" /> + </test> + </tests> + <help> + +**Syntax** + +This tool creates a dot plot of the contents of a LASTZ tabular file resulting from the alignment of one or more sequences to a single reference sequence. + +If multiple query sequences are present, they will be sorted by size, offset from one another in the dot plot, and separated by a gray line. + +- **filter** all alignments shorter than the filter will be excluded from the analysis. + +----- + +**Example** + +Chicken chromosome 4 was aligned against human chromosome 4 using LASTZ, specifying tabular output, no transitions, and performing gap free extension. + +Using a 100 bp filter above we get the following dotplot. + +.. image:: dotplot_chr4.png +</help> +</tool> \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/dotplot/test-data/human_vs_chicken_chr4.tabular Tue Nov 01 15:19:49 2016 -0400 @@ -0,0 +1,44574 @@ +3510 chr4 + 190214555 47505 47504 47601 97 AACAAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAAGAACAAGAA---CAAGAAGAACAAGAACAAGAAGAAGAAGAAGAAAGAAAAGAAGAAG chr4 + 94230402 10269793 10269792 10269892 10269793 10269792 10269892 100 AACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAG ....:.:..:x..x::..........::.xx.....xx.:...:x......---..x.........:::x....:x.xx::.....:....x.:.x.... 51M3I46M 66/97 68.0% 100/94230402 0.0% 3/97 3.1% -10222288 -84008114 +3078 chr4 + 190214555 50454 50453 50512 59 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGTCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........x.::........:.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -75982752 -18247650 +3124 chr4 + 190214555 82350 82349 82397 48 AAGTCCATTTTTTTGGTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 14492251 14492250 14492298 14492251 14492250 14492298 48 AAATGCATGTTTTCTGTTTGTGGTTTTTTTTTTTTTTTTTGTATTTTT ..:.x...x....:x.........................x.x..... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -14409901 -79820501 +3251 chr4 + 190214555 82354 82353 82406 53 CCATTTTTTTGGTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 + 94230402 81894504 81894503 81894556 81894504 81894503 81894556 53 CCACTACTGTATTTTGTGGTTTTTTTTTTCTTTTTTCTTTTGTTTTTGAGCTG ...:.x:.x.:x.................:......:....x........x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -81812150 -12418252 +3941 chr4 + 190214555 86070 86069 86208 139 AACATACAGGAATTCATGCTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCCTTTAATAGGTCCACATCACTTAGTAAA-CATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAA chr4 + 94230402 81517404 81517403 81517542 81517404 81517403 81517542 139 AGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATG-CAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAA .:....x.:::.:....:.x.x...x...x:x.x..xx.....x:.......x..:x.x..:..:.x.-.x..:xx.x........-..:.::.xx.xx........:....:...x....xx...xx..x......:.. 68M1D17M1I53M 92/138 66.7% 139/94230402 0.0% 2/138 1.4% -81431334 -12799068 +4798 chr4 + 190214555 86081 86080 86401 321 ATTCATGCTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGC----------------CTTTAATAGGTCCACATCACTTAGTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGT--TCTGAACGAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACAAGGTCCACAACACTGAATGAA-CACAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCCTTTAGATGGTCCACAAGCCTG chr4 + 94230402 81517246 81517245 81517563 81517246 81517245 81517563 318 ATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAGGTAGGTAAGAACCAAAGCTTTTGCCTCTTAAGGTCTTTGGATTGAAATGTGAGAAGTCATTTTAAACTG---TCTCATATTTTTCTAGGATTCAGTAA--------------CTTCAGTAATTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATG-CAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATTT----ACTGTGCATAGGCTTG ......x.......:..:..::.:xx:.....x.xx.......:..x----------------....x::xxx.:x.x:..x:.x::.x:.x..:x.....x....x:.::.xx.---:.::.:.:x.x.xx..:..x::.:..--------------.:x....--.:....x..:.....:..:.:......x.x...x...x:x.x..xx.....x........x..:x.x..:.xx.x.-.x..:.x.x.x.:.:..-....::.xx.xx........:....:...x....:x...xx..x......:..::::.----.:x..x..:.:..:.. 47M16I52M3D26M14D7M2I76M1D17M1I58M4D16M 186/299 62.2% 318/94230402 0.0% 41/299 13.7% -81431165 -12799237 +5064 chr4 + 190214555 86500 86499 86801 302 TATTCATACTGGCGAAAAACCCTACACATGTGAAAAATGTGGCA-----------------AAGCTTTTAACCAATCCTCAAGTCTTATTAT--ACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGTGGCAAAGCCTTTACTTGGTCCTCATCCCTTAATAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTTTTTATAGGTCCTCACACCTTGCTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACGTGCGAAGAATGTGGCAAAGCTT chr4 + 94230402 81517245 81517244 81517547 81517245 81517244 81517547 303 TATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAGGTAGGTAAGAACCAAAGCTTTTGCC---TCTTAAGGTCTTTGGATTGAAATGTGAGAAGTCATTTTAAACTG---TCTCATATTTTTCTAGGATTCAGTAACTTCAGTAATTTG------------AAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATTT .......x....x.....:..::.:x::.....x.xx.......-----------------........:x.---..:.x.:.....xxx..--.x.::x...x.x.....:.:...x:---::.:.:.xx.x.xx..:..x::.:..xx:.xx..x..x.------------..x:.:.....:.::.:......x.x...x...x:x.x...x.....x........x..:x.x..:x.:.x.:xx:x.x.x:.x.:x..:..:.::.xx.xx........:....:...x....xx..:xx..x......:..:::.. 44M17I11M3D17M2I25M3D39M12D148M 177/284 62.3% 303/94230402 0.0% 37/284 13.0% -81430745 -12799657 +3078 chr4 + 190214555 86598 86597 86700 103 AAAAACTTTACAAATGTGAAGAATGTGGCAAAGCCTTTACTTGGTCCTCATCCCTTAATAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGA chr4 + 94230402 55848437 55848436 55848539 55848437 55848436 55848539 103 AAAAGCCATACCAATGTTCTGAGTGTAACAAGGCTTTCAGTCAAAAACGAGGCCTCGATGAGCACATGAGAACCCACACCGGAGAGAAGCCGTTTCAGTGTGA ....:.:x...x.....xxx..:...::...:..:..:.x.:::xxx:x.xx...::..:.:..:.x.....::..:..:........:..x.x:xx:..... 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% -55761839 -38468563 +3408 chr4 + 190214555 87014 87013 87295 282 GGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAACCAATCCTCAGGCCTTATTATACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGTGGCAAAGCCTTTACTCGGTCCACAGCCCTGAATGAACATAAGAAAATTCATTCTGGAGAG-----AAACCCTAC--AAATGCAAAGAATGTGGCAAAGCCTATAACTTATCCTCAACCCTTACTAAACATAAGAGAATTCATACTGGAG---AGAAACCCTTCACATGTGAAGAATGT chr4 + 94230402 72727095 72727094 72727382 72727095 72727094 72727382 288 GGACAGAGTACTTATGAGTGCAGTGTGTGCAAGAGATGTTTCAGCCGCAGCTCAAGCCTCTTCAATCATCTGTGTACCCAGACTGTAAAAACGCTTCACAAATGCACGCAGTGTGAGAGGGTTTTCAACTTCAACTCAGCTCTGATTAAGCACCAAAAGATGCAT----GAGAGGCATAAAATATCACTAGAGTGTTCAGAGTGCGGTGACCATTTTACTTGCAGATCTAGCCTCACTATCCATCAAAAGACTCACAAAAGGGAGAAGAAGCCTTATATGTGTTTACAATGT ...x...:xx.:..::.:..:.:x.x:..:::x.:.xx...:.:..:xxx....:....:x.:.xx..:xx.x.:.::..xx...x.x...x:...:.......::x:x.:....:x.::.::..:.x::xxxx.x....:....x.:.:..:x.:..:..x...----.....-----...:x::..--:.:..:xx...:..:..::.xxx:.x..x:.xxxxx..x.x...:....xx...x.:.::.:...:.xx:.:.---....:..:.x:.::...xx.x..... 165M4D5M5I9M2I73M3I26M 153/278 55.0% 288/94230402 0.0% 14/278 5.0% -72640081 -21590321 +3225 chr4 + 190214555 89912 89911 89974 63 TTCTTTTCTCTTTCTCTTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 51591920 51591919 51591982 51591920 51591919 51591982 63 TTATTTTCAGCCTCTCCACCTTCTCTTTCTGATTGTTTTTTTTTTTTTTTTTCCTTTCTGAAA ..x.....xx::....:x.:....:.....xx..x.................::...:...:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -51502008 -42728394 +3048 chr4 + 190214555 113745 113744 113825 81 TTTTTCTTTCTTCTTTCTTTTTTTCTTTCTTTCCTTTCATTCTTTCCTCTCTTTCTTTCTTTCCTTCTTTCTTCTTTTTTT chr4 + 94230402 86491058 86491057 86491138 86491058 86491057 86491138 81 TTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTT ...:xx...:..:...:........xxxx..:..:.:.xx:x...:....:.:.:...:.....::.:::.:...x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -86377313 -7853089 +3225 chr4 + 190214555 133046 133045 133119 74 GCGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGACCCCAGGAGGTGGAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:.:...........::........x:xx.x...x::.....x.....:..x.xx:.x:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -75900158 -18330244 +3067 chr4 + 190214555 133160 133159 133219 60 ACAGCAAGACTCCATCTTAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 88547303 88547302 88547362 88547303 88547302 88547362 60 ACAACCAGAAAACTCCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ...:.x...xxx.x:..:................xx........:...:.:.:.:..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -88414143 -5816259 +3054 chr4 + 190214555 133178 133177 133235 58 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATGGTAAC chr4 + 94230402 1495007 1495006 1495064 1495007 1495006 1495064 58 AAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTAC ........x.:......x........:.:..:...:.....x....::.x:x...x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -1361829 -92868573 +3094 chr4 + 190214555 133179 133178 133227 49 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT chr4 + 94230402 1495004 1495003 1495052 1495004 1495003 1495052 49 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT .:.........x.:....x..........:.:..:...:.....x.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -1361825 -92868577 +3277 chr4 + 190214555 133179 133178 133228 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:...............:.:..:...:.....x....::. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -1361827 -92868575 +3562 chr4 + 190214555 147733 147732 147805 73 GTGCGCCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.x.....::...........::........x.xx.x...x::.........:.:..x.xx:..:..:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -75885471 -18344931 +3194 chr4 + 190214555 156940 156939 157126 187 AGTTTATGTTTGTGCTGGATTTAATCTTATCCATCTAGCTGTTCCG------CTTATACTCATACTAAATTGTTTCAATTTTTAGCTTTGTATGTGTTTTGAAATCAGGAGCTGTGATGCCTCCAACATTGTTGTTTTTCTTTTTTTCTTTTTGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 50052538 50052537 50052707 50052538 50052537 50052707 170 AGCTTATGTTTTTGCTA-CTTTAATATCACTCAT-TATTTGCAGTGAAAGCCTTTATAAT-ACATTAAACTATTTC--------------------TTTAGATATCAAGCATTTGTACCTTTCAAACAGTGCTGTTGATCATCATCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTT ..:........x....:-x......x.:.::...-..x:..:xx:.------:.....x.-.:.:....:.:....--------------------...x..x....:.x::.xxx.:x::..x....x..:....xx..x.:x.::..:.::x::....x.x..:..x::.:....:............... 17M1D16M1D11M6I8M1D15M20D97M 107/164 65.2% 170/94230402 0.0% 29/164 17.7% -49895598 -44334804 +3004 chr4 + 190214555 157053 157052 157140 88 CCTCCAACATTGTTGTTTTTCTTTTTTTCTTTTTGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGACAGTT chr4 + 94230402 68895484 68895483 68895571 68895484 68895483 68895571 88 CCTTCAGCACTGTTTTTTTTTTTTTTTTTAATCTATTTCTGCTGTTTGATGCCCTGTTGTTTGTGTTTTTTTTTCTTCTGCTGCAGTT ...:..:..:....x.....:.......:xx.:.:.....x::x..:xx.x:::.x..x...x.x.........:..:.xxx:..... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% -68738431 -25491971 +4292 chr4 + 190214555 161668 161667 161806 139 AACATAAGAGAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGAAAATCCTTTAATAGGT--CCACAACTCTTACGACACATAAGAGAATCCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGAAA chr4 + 94230402 81517404 81517403 81517542 81517404 81517403 81517542 139 AGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACAGAATTAGA--CATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAA .:.....:.::.:......:.x...x...x:x.x..xx.....x........:..:..x..:..:.x.:--.x.x..:.xx..x::....x..xx::.--........:....:...x....xx...xx..x......x.. 69M2I27M2D41M 93/137 67.9% 139/94230402 0.0% 4/137 2.9% -81355736 -12874666 +3069 chr4 + 190214555 165670 165669 165741 72 GTGCCTGTAATCTAAGCTACTTGGGAGGCTGAGGCTGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.::x.........::........x.:x.x...x::.........:.:..x.xx:..:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -75867536 -18362866 +3958 chr4 + 190214555 172913 172912 172987 75 GGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGTAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x......:.........::::........x.xx.x...x.:........::.:..x.x.:..:..:.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% -75860290 -18370112 +3472 chr4 + 190214555 187185 187184 187268 84 TTGGTTTTTTTGTTTTTTTGTTTTTTGGGGTTTTTTTTGTTTTTGTTTTTGTTTTTTGTTGAGACGGAGTCTCGCTCTGTAGCC chr4 + 94230402 69930299 69930298 69930375 69930299 69930298 69930375 77 TTGGTTTTTTTGTTTGTTTGTTTTTTGGGGGTTT-----TTTTTGCCCCTGCTGATTGCAGAG--GGGATCTGGCCTCGTGGCC ...............x..............x...-----......::::..:.xx...:x...--..::...x..:::..:... 34M5D24M2D19M 59/77 76.6% 77/94230402 0.0% 7/77 9.1% -69743114 -24487288 +3213 chr4 + 190214555 187185 187184 187266 82 TTGGTTTTTTTGTTTTTTTGTTTTTTGGGGTTTTTTTTGTTTTTGTTTTTGTTTTTTGTTGAGACGGAGTCTCGCTCTGTAG chr4 + 94230402 34676476 34676475 34676553 34676476 34676475 34676553 78 TTGGTGGGTTTGTTTGTTTGTTTTGTGGGGTTTTTTTTTTGCTTGCTTTAGGTTTTTTTC----CTAAGTGTCTTTCTTTAG .....xxx.......x........x.............x.x:...:...x.x.....x.:----.x:...x..x:...x... 60M4D18M 59/78 75.6% 78/94230402 0.0% 4/78 5.1% -34489291 -59741111 +3095 chr4 + 190214555 190915 190914 190981 67 TGTAATCCTAGCTACTTGGGAGGCTGAGGAAGGAGAATCACTTGGACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.........::........xxxx.x...x......:......:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -75842296 -18388106 +4087 chr4 + 190214555 195925 195924 196061 137 CTTCTGTCTTTCTCTTTTTTTCTCTCTTTGACTCCCTCTTTGTCTCTCTGCCTCTTTCCTTTCTCTCTCTGCTTCTCTTTCCTCTCTCTCTCTC-CCCTCTCT---------CTCTCCCTCTCTCTCCCT-------CTCTTTTTCCTCTCTCT chr4 + 94230402 40565584 40565583 40565736 40565584 40565583 40565736 153 CTTCTGTGCTTCT-TCAAGGTCTCTCTGTAACACACTGTTTTTTCCTCTGTCTTTGGTCTTTCTCCTTCGGCCTTTCTTTTGTTTTACTCTCTTGCTTTCTCTTACAACAAACACTCCCTCTCTCTTGCTCCAGCTGCTCTTTGTGCTCTATCT .......x:....-.:xxxx.......x.:..x.x..x...x.::.....:..:.xx:.......::..x..:.:.....:x.:.:x......:-.::.....---------.x............:x..-------......x.x....x... 13M1D80M1I8M9I18M7I17M 97/136 71.3% 153/94230402 0.0% 18/136 13.2% -40369659 -53860743 +3417 chr4 + 190214555 221296 221295 221356 61 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTAAACCCAGAGGC chr4 + 94230402 76033205 76033204 76033265 76033205 76033204 76033265 61 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .....x....:.:.........::::........x.xx.x...x.:...:........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -75811909 -18418493 +4196 chr4 + 190214555 225287 225286 225360 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGCCACAAGAATCACTTGAACCCAGGAGGCGAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::..........x::x...x.............:..x:xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -75807917 -18422485 +3000 chr4 + 190214555 237607 237606 237655 49 AATGTGAAGAATCTCTTTTCTCTTGCTTTTTTTTTTTTTTTTTTACTTT chr4 + 94230402 36201717 36201716 36201765 36201717 36201716 36201765 49 AATGAGATGGTCCTCTTGCCTATTGCTTTTTTTTTTTTTTTTTTACCTT ....x..x.:x:.....x:..x........................:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -35964110 -58266292 +3724 chr4 + 190214555 240362 240361 240431 70 CGTAGTGACGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::....::...:.--....:.:...........::........x.xx.x...x.............:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -75792835 -18437567 +4494 chr4 + 190214555 254140 254139 254291 152 TCTGAATGAACATAAGAAAATTCATACTGGAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGACAGTCCAGAAGCCTGAATGAACATAAGAATATGCATACTGGAGAGAAACCCTACACGTGTGAAGAATGTGTCAAGCTTT chr4 + 94230402 81517396 81517395 81517547 81517396 81517395 81517547 152 TTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATTT .:....x..:.....:..:.:......x.x.:.x...x:x.x..xx.....x........x..:x.x..:.:xxx.:xxx...:x:.::xx:.:..:.::.x..x:........:....:...x....xx...xx..x.....x:...x... 152M 96/152 63.2% 152/94230402 0.0% 0/152 0.0% -81263256 -12967146 +3849 chr4 + 190214555 254242 254241 254535 294 TATGCATACTGGAGAGAAACCCTACACGTGTGAAGAATGTGTCA------------------AGCTTTTAACCAATCCTCAAGCCTTATTAT--ACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGCAGCAAAGCCTTTACTCAATCCTCATCCCTTAATAAACA--AGAGAATTCATACTGGTGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTTATAGGTCCTCACACCTTACTGAACATAAGAATATTCATACTGGAGAGAAATCCTACAAATGTGAAGAATGTGGCAA chr4 + 94230402 81517245 81517244 81517542 81517245 81517244 81517542 298 TATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAGGTAGGTAAGAACCAAAGCTTTTGCC---TCTTAAGGTCTTTGGATTGAAATGTGAGAAGTCATTTTAAACTG---TCTCATATTTTTCTAGGATTCAGTAA---CTTCAGTAATT---------TGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAA ...x...x.......:..:..::.:x:......x:xx....x..------------------.......:x.---..:.x.:.:...xxx..--.x.::x...x.x.....:.:...x:---::.:.:.xx.x.xx..:..x...:..---...:.x.x.x.---------.x..x:.:..--.:.::.:......x.xx..x...x:x.x...x.....x........x..:x.x..:x.:.x.:xx:x.x.x:.x::x:.:..:.::.x..xx........:....:.:.x....:x...xx..x......:.. 44M18I10M3D17M2I25M3D26M3D11M9D10M2I133M 171/276 62.0% 298/94230402 0.0% 40/276 14.5% -81263003 -12967399 +3229 chr4 + 190214555 266142 266141 266202 61 GTGCACCTGTAGTCCCACCTACTTGGGAGGCTGGGGCAGGAGAATCGCTTCAACCCAAGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...x.......::......:.x.xx.x...x.:...x......::.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -75767062 -18463340 +3017 chr4 + 190214555 293045 293044 293092 48 GCAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAC chr4 + 94230402 88382708 88382707 88382755 88382708 88382707 88382755 48 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGC ....x:.........xx.x.........::.:..............:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -88089663 -6140739 +3032 chr4 + 190214555 293256 293255 293326 71 ACACATATATATGTATATATGTATGTGTATATATATATATATATGTGTGTGTGTGTATATATATATACACA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .....:....x:::..::.x::.::..:...:.x.x....:...:.x.............::..::..::. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -22306942 -71923460 +3129 chr4 + 190214555 293283 293282 293337 55 TATATATATATATATATGTGTGTGTGTGTATATATATATACACACACACACAGTA chr4 + 94230402 44815600 44815599 44815654 44815600 44815599 44815654 55 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACAATA ...:.:.:.::...:..:..x:...........x.:.x......:.......:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -44522317 -49708085 +3048 chr4 + 190214555 293286 293285 293328 43 ATATATATATATATGTGTGTGTGTGTATATATATATACACACA chr4 + 94230402 29797141 29797140 29797183 29797141 29797140 29797183 43 ATACATACGTATGCGTGTGTATGTGTAGATATATATACACACA ...:...::...::......:......x............... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -29503855 -64726547 +3048 chr4 + 190214555 293297 293296 293339 43 TATGTGTGTGTGTGTATATATATATACACACACACACAGTAGA chr4 + 94230402 83331413 83331412 83331455 83331413 83331412 83331455 43 TATGTGTGTATATGTGTATATATATATACACACATAAAATAGA .........:.:...:..........:.......:.x.:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -83038116 -11192286 +3445 chr4 + 190214555 297128 297127 297210 83 CATAGTGGCGTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAAAGTCACTTGAATCCGGGAGCTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--...:.x....:.:.........::::........x.xx:x:.:x........:..:.:....xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -75736069 -18494333 +3243 chr4 + 190214555 299344 299343 299429 86 TATATATACACATATATACACATATGTGTATATATATATACACATATGTACACATATGTGTATATATATATACACATATATACACA chr4 + 94230402 21109222 21109221 21109301 21109222 21109221 21109301 80 TATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCAT------GCTTCTGTGTATATGTGTATGAATATGCATGCACA .....:...x..:......x.:.:.::x....::...:...x...------:.x.x.........:.:...:x.:..::..:.... 45M6D35M 56/80 70.0% 80/94230402 0.0% 6/80 7.5% -20809878 -73420524 +3573 chr4 + 190214555 299358 299357 299429 72 TATACACATATGTGTATATATATATACACATATGTAC--ACATATGTGTATATATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..-.....:.:x...:..........::..--.:....x...::..:........x:...:...... 9M1D27M2I35M 56/71 78.9% 73/94230402 0.0% 3/71 4.2% -56567933 -37662469 +4218 chr4 + 190214555 299380 299379 299487 108 TATACACATATGTACACATATGTGTATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATACACATATATACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......::.:...x:x::.:x.:....x.....:...x..:......x.:.:.::x....::...:..:x:.::.x.x.........:.:...:x.:..::..:.... 108M 69/108 63.9% 108/94230402 0.0% 0/108 0.0% -20809814 -73420588 +3156 chr4 + 190214555 299400 299399 299483 84 TGTGTATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATACACATATATA chr4 + 94230402 58675362 58675361 58675445 58675362 58675361 58675445 84 TGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ...x.:...x.:x.:x::x..x.x.......x.x.....::.........:..x........:.:.:.:.:x:.x.:....x.. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -58375962 -35854440 +3173 chr4 + 190214555 299405 299404 299471 67 ATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.:....::.:...:x:..:....x:..:...:.x........:.....xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -45763894 -48466508 +3301 chr4 + 190214555 299414 299413 299479 66 TACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATACACATA chr4 + 94230402 55049666 55049665 55049730 55049666 55049665 55049730 65 TAGGCATGTATA-ACGTATGTGTGTTCACATATATATACACCCATGTGTATACATGGTCACACATA ..x:...:....-..:.......:.x:.:............x:.........:..:xx:....... 12M1D53M 50/65 76.9% 65/94230402 0.0% 1/65 1.5% -54750252 -39480150 +3874 chr4 + 190214555 299431 299430 299569 139 ATGTGTATATATATATATATACACATATGTGTATATATATATACACATATATACACATATGTGTGTATATATACACACATA--TACGTATATATGTGTATATATACATATATACACA----TATA---TATGTATATATATAGTTTTA chr4 + 94230402 21109187 21109186 21109334 21109187 21109186 21109334 148 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACAGTTTCA ..x..:x....:..:.:.:.x:x::.:x.:....x.....:...x..:......x.:.:.::x.:..::...::..x...:--.x:..:...........:x...:::..::....:----..:.---.x...:x:.:..:.....:. 81M2I34M4I4M3I20M 88/139 63.3% 148/94230402 0.0% 9/139 6.5% -20809756 -73420646 +3038 chr4 + 190214555 299444 299443 299502 59 TATATATACACATATGTGTATATATATATACACATATATACACATATGTGTGTATATAT chr4 + 94230402 76709592 76709591 76709650 76709592 76709591 76709650 59 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATAT ........::...:...x....:.x::..x.....:...::::..x.....x....... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -76410148 -17820254 +3421 chr4 + 190214555 299448 299447 299521 74 TATACACATATGTGTATATATATATACACATATATACACATATGTGTGTATATATACACACATATACGTATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..-.....:.:x...:...........:..xx....:.x...::..:..:.:...x:..:...:.:. 9M1D64M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% -56567843 -37662559 +3004 chr4 + 190214555 310175 310174 310219 45 CTTCTTCACTTTTTTTTCTTTTTTTTTTTTTCAGACAGAGTCTTG chr4 + 94230402 84198262 84198261 84198306 84198262 84198261 84198306 45 CTTCGTTGCTCTTCTTCCTTTTTTTTTTTTCCAGACAGAATCCTG ....x.::..:..:..:.............:........:..:.. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% -83888087 -10342315 +3370 chr4 + 190214555 319930 319929 320001 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGATTCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x..xx..........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -75713276 -18517126 +3339 chr4 + 190214555 324739 324738 324795 57 CTCTGTCAAAAAAAAAAAA--AAACAAAAAAACAGACAAAATAATCACACATAAAGAAC chr4 + 94230402 75561888 75561887 75561946 75561888 75561887 75561946 59 CTCTGTTAAAAAAAAGAAAGAAAACAAACAAACAAACAAAATACCCACACACAAGATAC ......:........:...--.......x.....:........x:......:..::x.. 19M2I38M 47/57 82.5% 59/94230402 0.0% 2/57 3.5% -75237149 -18993253 +3726 chr4 + 190214555 329369 329368 329451 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGAGAGGCTGACGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:............:.......xx.xx.x...x.:........::.:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -75703828 -18526574 +3635 chr4 + 190214555 333883 333882 333956 74 GTGTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAAGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:............:........x.xx.x...x..........::.:..x:xx::....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -75699321 -18531081 +3661 chr4 + 190214555 344654 344653 344736 83 CATGGTGGTGCGCACCTGGAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x..x...:.........:.::.......:x.xx.x...x.............:..x:xx:..:..:.. 11M2D70M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -75688543 -18541859 +3077 chr4 + 190214555 346821 346820 346895 75 TGTCCTGTGTATGTGTGTGTATATATATATGTATATACATGTATGTATATATATGTATACACACACACACACACC chr4 + 94230402 47135168 47135167 47135242 47135168 47135167 47135242 75 TGTCTTTGCTGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACTCC ....:.xxx.:...:.:..:...:.:..:x:.xx:.x:.....::.:...:.:....:........:.....x.. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -46788347 -47442055 +3875 chr4 + 190214555 352247 352246 352329 83 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:.........:::.........x.xx.x...x...........:.:..x:xx:.....:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -75680950 -18549452 +3091 chr4 + 190214555 369589 369588 369669 81 CTGGATTATTTTATCTCTGTCCCTTATTTTCTTTTTCTGTCTTCCTGTTTGTCTTTTAGATTTTTGTGTTGATAGGACTTT chr4 + 94230402 55676582 55676581 55676662 55676582 55676581 55676662 81 CTAGTTTTCTTTCTCTATGTTCCTTGTTTTCCTCCTGTAGTTTTCTTCTTGATTTACAGGCGTTTGTGCTGACAAGGCTTT ..:.x..x:...x...x...:....:.....:.::.x.:x:..:..x:...x:..x:..::x......:...:.:.:.... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -55306993 -38923409 +3017 chr4 + 190214555 369744 369743 369782 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -24422882 -69807520 +4176 chr4 + 190214555 373011 373010 373311 301 ATTCATGCTGGAGAGAAACCCTACACTTGTGAAGAATGTGGCAAAG-----------------------CCTTTAAATGGTCTTTAATATTTAATGAACATAAGAGAATTCATACTGGAGAGAAACCTTTTACTTGTGAAGAATGTGGCAGCATCTTTACCACATCCTCACACTTTGCTAAGCATAAAATAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTTCACAACCCTTACTAAA-CATAAGAGAATTCATGCTGGAGAGAAACCCATCACATGTGAAGAATGTAGGAAAATCT chr4 + 94230402 81517246 81517245 81517547 81517246 81517245 81517547 302 ATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAGGTAGGTAAGAACCAAAGCTTTTGCCTCTTAA-GGTCTTTGG------ATTGAAATGTGAGAAGTCATTTTAAACTG---TCTCATATTTTTCTAGGATTCAGTAACTTCAGTA------------ATTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATG-CAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATTT ......x.......:..:..::.:x:x.....x:xx.......:..-----------------------...:.x..-.......::------..x:.x..:x.....x....x:.::.xx.---:..:x..:..x.xx..:..x::.:.:.x..xx..------------.:..x:xx:.........x:.:......x.x...x...x:x.x:.xx.....x........x..:x.x..:..:.x.-:x..:.xxx...x....-..:.::.xx.xx...:....:....:...xxx..xx...xx..x....:.x..:..:. 46M23I8M1D9M6D29M3D34M12D77M1D17M1I58M 176/278 63.3% 302/94230402 0.0% 47/278 16.9% -81144235 -13086167 +4456 chr4 + 190214555 373170 373169 373479 310 CATAAAATAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGT-----TCACAACCCTTAC-----------------TAAACATAAGAGAATTCATGCTGGAGAGAAACCCATCACATGTGA----AGAATGTAGGAAAATCTTTACCTCATCCTCA--AACTTTGCCAAACATAAGCGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTCCACAACCCTTACTAAA-CATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTT chr4 + 94230402 81517237 81517236 81517547 81517237 81517236 81517547 311 CACATTATTATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAG------GTAGGTAAGAACCAAAGCTTTTGCCTCTTAAGGTCTTTGGATTGAAATGTGAGAAGTCATTTT-------AAACTGTCTCATATTTTTCTAGGATTCAGTAA--------------CTTCAGTAATTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATG-CAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATTT ..:.xx..x......x..........:..::..xx:.....x:xx.......:..------:.....-----:..x.:.::..:.-----------------.x:.x..:x.....x....x:.-------..x.::..x...:.xx----..:..x:..x..--------------.:...--..:..x:xx:.:.....:x::.:......x.x...x...x:x.x..xx.....x........x..:x.x..:..:.x.-.x..:.xxx...x....-..:.::.xx.xx........:....:...x....xx...xx..x......:..:::.. 55M6D6M5I13M17I22M7D16M4I12M14D5M2I78M1D17M1I58M 185/282 65.6% 311/94230402 0.0% 57/282 20.2% -81144067 -13086335 +4273 chr4 + 190214555 373227 373226 373390 164 TTTAATAGGTTCACAACCCTTACTAAACATAAGAGAATTCATGCTGGAGAGAAACCCATCACATGTGAAGAATGTAGGAAAATCTTTACCTCATCCTCAAACTTTGCCAAACATAAGCGAATT---CATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAA chr4 + 94230402 81517379 81517378 81517542 81517379 81517378 81517542 164 TTCAGTAACTTCAGTAATTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACA---GAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAA ..:.:..:x....xx.x::.x.xx:.:.....:.::.:....:.x.x...x...x:xx....x.....x......:....:x:x..:.x.x:::xx:x...x..x.:x..:..:.---.....---........:....:...x....:x...xx..x......:.. 115M3D5M3I41M 103/161 64.0% 164/94230402 0.0% 6/161 3.7% -81144152 -13086250 +3341 chr4 + 190214555 373348 373347 373462 115 TTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTCCACAAC----CCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGA chr4 + 94230402 55848427 55848426 55848539 55848427 55848426 55848539 113 TTCATACAGGAAA--AGCCATACCAATGTTCTGAGTGTAACAAGGCTTTCA----GTCAAAAACGAGGCCTCGATGAGCACATGAGAACCCACACCGGAGAGAAGCCGTTTCAGTGTGA .......x...:.--.:..x...x.....xxx..:...::...:..:..:.----...x.x...----...::x.:.:..:.x.....::..:..:........:..x.x:xx:..... 13M2D36M4D9M4I51M 75/109 68.8% 113/94230402 0.0% 10/109 9.2% -55475079 -38755323 +3477 chr4 + 190214555 394870 394869 394940 71 ACATGGTGGCATGCACCTGTAATCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....--.....x....:.:.:.......:.::........x.xx.x...x.:.........:.:.. 9M2D60M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -75638326 -18592076 +3593 chr4 + 190214555 399232 399231 399292 61 TCCAAAAAAAAAAAAAAAAAAAGAAAAAAAAACCCACA-----AGTATTTTTATGTTGATTATGTA chr4 + 94230402 29560298 29560297 29560363 29560298 29560297 29560363 66 TCCAGGAAAAAAAAGAAAAGAAGAAAAAAAAACCCACAAGTGGAGTATTTTCCACTTGATTATACA ....::........:....:..................-----........:xxx........::. 38M5I23M 51/61 83.6% 66/94230402 0.0% 5/61 8.2% -29161066 -65069336 +3648 chr4 + 190214555 410300 410299 410372 73 TGTACCTATAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACATGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..x.:..:.:...........::........x.x..x...x...x.........:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -75622905 -18607497 +4846 chr4 + 190214555 441717 441716 442381 665 CCAGTATGAATTTTCTTATGTGCATAAAGAT-TTGCAGACTGTCTAAAG------------GTTTTGCCACAGTCTCCACACGTG------TAGGGTTTCTCTCCAGTATGAATTTTCTTATGCGCATAAAGATTTGCAGACTGTCTAAAGGTTTTGCCACATTCTCCACATGTGTAGGGTTTCTCTCCAGTATGAATT------------CTCCTATGTACATAAAGGATTGCTGACTGTCTAAAGGCTTTGCCACATTCTTCACATGTGTAGGGTTTCTCTCCAGTATGAATTCTCCTATGTTTAGTAAGGGTTGTGGAACTAGTAAACGCTTTACCACATTCTAAACATTTAAAGGGTTTCTCACCTGTATGAA------------------------------------TCCTCTTATGTTTAGCAAAGCTTGAGGA-TGACG----TAATGACTTTGCCACA-TTCCTTACATTTGTAGGGTTTCTTTCCAGTATGAATTTTCTCATGTCTATTCAGGTGTGAGGACTGTTTAAACACTT---TCCCACATTCTTTACATTTGTAGAGTTTATCTCCAGTATGAATTTTCTTATATTCGTTCAGGTTTGTGGACCATCCAAAGGATCTGC---CACGATCTTCACATTTGTAGGGTTTCTCCCTAGTGTGAACTCTCCTATGTGTAGTAAGGTTTCTTGACCTACTAAAGGCTTTGCCACACTCTTCACATTTGTAAGG chr4 + 94230402 8745085 8745084 8745777 8745085 8745084 8745777 693 CCTATGTGGATAGTCTTTTGTGTGTATTGATATTACGTGTCGTTTAAAGCCTGACGCATCCGTAGTGCTATATTCGCAATACTGGCATTGATAAACTTTTCTTCCACTGTGGGTCTTCATGTGCTTCTTAAGTTCAGTTTGCTGCCTAAATCCTCTTTTACATCTTTTGCATTTAAAAGGCAGGTCCTTGGTGTGAACCGAGAGGATGTGCCCGCTCAGTATA-AAAGGAT--CTGACGTTTTAAAG------TCACAGTGTCTACACTGATGTATCTTTTTACCTTTATGGGTTTCACTATGCTTTTTGAGCTCTGATGGACGATGGAAGCCTTTTTCACATACCTCGCATTTGTGGGGAAAATCCTTTGTATGAACTGAAATAATGTGTCGCTTCAGGTCACTGGAGTTGGTGCTCTTATGGT---CACAGTGTGGACACTGATGAGTCTTATGCCCTTGAAACAATTCCGTGTGCTGCTGCAGCTCCTTTTCA-----------------TCTGTAAAAGCCTGGGGACAGTGCTCACATTTAAATGGCAAGTCATTCCCGT-------GTTTGGTTTTGATATGAGTTTTCAGAT---------------TGGACTGATCAGCACACCTGAAGACACAGTGCTGACACTGGTATGGCTTTTCCCCAGTGTGGGTCCTCATATGCTTTTTCAGCTCTGACGGATGACGGAATCCTTTCCCACACTCCACACATACGTGAGG ..x:.:..:..xx....x....::..xx...-..:.:x:::..:.....------------..xx...:.:.x..x.x.:..xx.------..::x...:::....x.:..::.:...x.:...x:x.x...x.:x.:xx:...:.....xx:.:.x::....::.:::...x.:x.:..:xxx..::::..:....::------------.:x..xx...:.-.......--.....xx.:.....------:....x.x.::...:xx:.:x:x:..:.:x..xx....::..::x.....:..xx.:..xx:..xx.:..x.xx:..xx....x:.....x.:xx:.....:x:...xxxx..x::........------------------------------------.x........x.---..x..:x..::x.-...:.----.x...x.:...xx...-....x.::::.xx.:x:.:.:....:..-----------------...:.xx.:.:x..:....x..x:xx...:..---.xx..x:.:x..:x.:.-------....:x:.::::.....:.....xx..---------------.....::x:..:x:x.:...x---...::.x:.x...:.x...x..:..:....:......::::...x....:x.xx.x..x.:.xx:.:x:x..x:..xx....x........:x.....x:..:... 31M1I17M12I24M6I108M12I12M1D7M2D14M6D124M36I12M3D13M1I5M4I16M1I28M17D32M3I17M7D27M15D21M3I106M 360/614 58.6% 693/94230402 0.0% 130/614 21.2% -8303368 -85927034 +3063 chr4 + 190214555 450938 450937 450987 50 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:......x........:.:..:...:.....x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -1044068 -93186334 +3123 chr4 + 190214555 450940 450939 450991 52 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:....x..........:.:..:...:.....x....::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -1044064 -93186338 +3405 chr4 + 190214555 450943 450942 450997 55 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATC chr4 + 94230402 85548420 85548419 85548474 85548420 85548419 85548474 55 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATC .............:.xx.....:...:.:.:.::...:..........x...... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -85097477 -9132925 +3405 chr4 + 190214555 455426 455425 455509 84 ACATGGTAGTGCACACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAATCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..:......:--...:..:...........::........x.xx.x...x.::.....:.::.:..x:xx:..:..:.. 15M2D67M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% -75577770 -18652632 +3021 chr4 + 190214555 468301 468300 468372 72 GCGCCTGTACTCCCAGCTAGTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....x.:.......x...::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -75564905 -18665497 +3532 chr4 + 190214555 483412 483411 483494 83 CATGGTGGTGAGTGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--....:.:...........::........x.xx.x...x.x...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -75549785 -18680617 +3366 chr4 + 190214555 485840 485839 485917 78 TGGTGCGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCGAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::.--.:....:...........::........x.xx.x...x::........x..:..x.xx:..:..:.. 9M2D67M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% -75547362 -18683040 +3081 chr4 + 190214555 492170 492169 492220 51 AAAAAACAAACAAACAAACAAAAAAAAAACCTTAAATTTCAGTTTTTTCCT chr4 + 94230402 72445056 72445055 72445106 72445056 72445055 72445106 51 AAAAAACAAACAAACAAACAAAAAAAACGCTATATAATGTATTTTTTTCCT ...........................x:.:x..x.x.x:.x......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -71952886 -22277516 +3407 chr4 + 190214555 493534 493533 493636 103 TGGGGCATGGTGGTGCACACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTTCTTAAACTCAGGAGGTGGAGGTTGCAG----TGA-GCCAAGCTCATG chr4 + 94230402 76033192 76033191 76033297 76033192 76033191 76033297 106 TGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG ..:x:..::.........:--.:....:.........::::........x.xx.x...x:x...:...:...:..x.xx:..:..:..----...-.......xx... 19M2D67M4I3M1I12M 71/101 70.3% 106/94230402 0.0% 7/101 6.9% -75539658 -18690744 +3429 chr4 + 190214555 505494 505493 505575 82 GTGGTGCCACACACCTGTAGTTCCAGCTACTTGGGAGGCCAAGGTGGGAGGATCGCTTGGGCCCAGGAGTTCAAAGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----..x..................::....::..x:xx.x.:.x.:....::.....:..:.:x::....:.. 7M5D70M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% -75527707 -18702695 +3587 chr4 + 190214555 511157 511156 511235 79 GTGGCGCATGCCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:::...........::........x.xx.x...x.......:.....:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -75522044 -18708358 +3311 chr4 + 190214555 566781 566780 566865 85 ACCCCTGCATCCCACCCCTGCATCCCACCACCTGCCTCCCACCTCCTGTATCCCACCCCTGCATCCCATCCCCTGCATCTCAGCC chr4 + 94230402 721874 721873 721958 721874 721873 721958 85 ATTCTTCCCCCTCCCCCCTGTACCCCAAGGACTGCCCTCGGTGTCCCTCAGCCCAGCCCTGCTTCCCATCCCCCTCATCTCACCC .::.:.x.x:.:.x......:.:....xx:x.....::.x::x...:x:.x....x......x..........:x.......x.. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% -155093 -94075309 +3179 chr4 + 190214555 571414 571413 571481 68 CAACAACAACAACAAAGAAAAAAAAAGAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGA chr4 + 94230402 59181895 59181894 59181956 59181895 59181894 59181956 62 CAACAACAACAACTAAGAAAGAAAAAAGGAAAAAATGGA------AAATAGAGAAACTAAGAAATGGA .............x......:.....::....:..x.:.------...x.:.....xx......x... 39M6D23M 50/62 80.6% 62/94230402 0.0% 6/62 9.7% -58610481 -35619921 +3191 chr4 + 190214555 571714 571713 571798 85 GCAATTTGAGTTTAGAGGTATGTGGGATTCTATT-----------TCCTCTGGTAAACTTAAAAAAAACAAACAAACAAACAAAAAAAAAACCACC chr4 + 94230402 38615084 38615083 38615177 38615084 38615083 38615177 94 GCAATTTGAGCTAGGA--TTTTTGGCTGTTTATTATAGATGGCTCTTTTCTCATCATTTTAAAAAATAAAAACAAACAAACAAAAAAAAAATCACC ..........:.x:..--.x.x...xxx.:....-----------.::...x:.x.x:........x.x......................:.... 16M2D16M11I51M 64/83 77.1% 94/94230402 0.0% 13/83 15.7% -38043370 -56187032 +3061 chr4 + 190214555 571751 571750 571800 50 TCTGGTAAACTTAAAAAAAACAAACAAACAAACAAAAAAAAAACCACCTT chr4 + 94230402 15869701 15869700 15869750 15869701 15869700 15869750 50 TCCAGCAAGTTTTAAAAAAAACAACAAACAAACAAAAAAAAAACAACCCT ..::.:..::..x.......xx......................x...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -15297950 -78932452 +3081 chr4 + 190214555 571764 571763 571801 38 AAAAAAACAAACAAACAAACAAAAAAAAAACCACCTTG chr4 + 94230402 78584244 78584243 78584281 78584244 78584243 78584281 38 AAAAAAACAAACAAGCAAAAAAAAAAAAAACCACCCTG ..............:....x...............:.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -78012480 -16217922 +3085 chr4 + 190214555 571766 571765 571829 64 AAAAACAAACAAACAAACAAAAAAAAAACCACCTTGATATTCCACATTAGTACATGAACACCTA chr4 + 94230402 52767001 52767000 52767061 52767001 52767000 52767061 61 AAAAACAAACAAACAAACAAAAAAAAGACCACCATGGGAGC---TACTGGAAACTGAGCACCTA ..........................:......x..:x.x:---:.:.:.x.xx...:...... 41M3D20M 48/61 78.7% 61/94230402 0.0% 3/61 4.9% -52195235 -42035167 +4864 chr4 + 190214555 575724 575723 576555 832 CCCCGGGGCCCCGGCCGCGGCCCCCGACTCGCCCGGCGTGGCCTCGGGAGCGCCTGCCGGC-----GCCGCGGGGACCCCCAAACCCGGGCCCGGTTCCGACCCCGCGAGGGGCGCGTCCCGGGGTCCGCAGCAGAGCAGGGCGGCGCCGAGCAGTGAGAGGCCGGCGGCCAGCAGCAGCCCGGAGTAGAAGGCGCCGGCGGCGGCCCCCAGGCGGAACGGCTCCCCGCGCAGCTCCGAGCCCAACGAGAAGCACTTGAGGCCGACGGCGGCGGCGCTGAGCGCGCAGGCGAGCAGGAGGCAGGAGGAGAGCG-CGGCGCAGGCCCCGCGG-ACG--CTCCACTTCATCC------TCCGCGCCCGAGCCGGCCCGCACCCCGCGCGCCCGCCGCCGCCCGCCGCCGCCCCCGCCGCCTGCGCCTCCTCCCGGCGCCGCGCGGCCGGACCGCCGGCCTCCTCC---------TCATCCTCCCGCGTCCTCCCGGGCCCGCGCCGCC--GCCGCCGGAGCCCGCATCCTCCGCCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGACCCCGCGCCGGGAACCGATGCGGCGCAGAGACCGCAGGGCG--CGCGCCCCCTCCCCAGCCCGCGGGGCCCCTCCCAGGAGGCTCGTTCCCCCCCAACCCCCC--------------ACCCCGCCCGCGGCCCCGCGCGCCTCGCCCTGGCGCCGCCCTTCCCCGCC---------------CCCGGCAGCCCCCGCCACCCCCGGGACGCCCCT----CCGCTTCCTCCTCCCGGAGCGGGGGCCCCTGGCCGCGTCTCTCCGCCTTCCCTCCCTATCCGCGCCCCTATCCGGCGCGGGCCGCTGCGGAAACG----CAGCTCTCCAC chr4 + 94230402 55417564 55417563 55418409 55417564 55417563 55418409 846 ccCCTGAGCCGAggc---ggccgccg----ggcgggggcggtcccga-------tgccggcaggtgggagcggcggcccct---cctcggcggggtgcccgcggcggcaggcggccgccccgc--TCCGCTCCGCCGCGATGCTGCCCT----AGCGAG-GGATAATGACAAGGAGAGGCGAGGGGCAGA-GCCGCCGCCGGGAGCCCC-----------GTCTCTCGCTCTCCTCCCCGCTCGCCGGCGCTCCCCGGCTCCCGCTGTCGG-GCCGCCTCGCTGACAGGCG-GCGGGCGGAGAGGGTAGAGGGGCGGCGGGGGGATCGCGGTGCGGCCGCCGTTCCCTCCGGGCGCTCCGTGCCCG-GCCGGGCAGCGCTGCCCGCCTCCTCCTCCTCCCGCCTCCCTCTCCGCCGCGCGCGCTGCCCGACGAGGCCGGCCGGGAGCAGCAGCGGCCGCCGCCGGCGGAGGAGACCCCGACCATGTCCAGCAAGAGCCGGAAGAGCAAGGAACAGGGGAGAGTGACCTT--CCCCCCgcagcagcagcagcagcagcagcagcagcagcaggaggaggaggaggaggaggaggcagaggaagaagagCGGCAGCGCCGGCGCCGCGGCTGGAGAGGCGTC-AACGGTGGGCTGGAGCCCCCGCCGCCGCCCCTGCGCGCCGTGAAGACCCTCCGGGAGCCCTACG-GCTACTACCCGCCGCTGCCCTTCGCCAGCACCATGTAAGTCGGGACCGGGGGCCGCCAACTTccccggggcggccgcggggccggccTCGGTACCCGGCCTCTGGACGCCGGGCCG----TCTCCG----CCCCGTCGAGCCGAGCTCAGGTGCGGGGCAGGGCTCGGAGGGGCCGGGCACAGCGCGCCGC ....x.:...xx...---....x...----.x.x..x.:..:.:..:-------.......-----.xx....x.:....:---..:x...xx...x..x:.xx..xx...x.xx..:....x--.....xx.:xx..::x..x..x.:----..:...-..x::::.:.x..x..x:..xx..:.:...-.x.....x...x:.....-----------.:::.:...x.xx....xx..:.:x..:x:xx.x.:x.xxx...x:.x...-.x...:xx..xx:......-..:..x..x::.:.x....x.-.....x:..xx:.....-:..--.x..::.:.x...------....:.....-.....x.x..:.:x.x...x:..x..x..x......x..x:.:.......x:....:x..:xx..:x....xx...xx.x.x.:x.....x..x..---------xxx:..xx..::....xx.x:.:x...x:xx:x.--.xx:.x..:.xxx.::x...:--..:.....x..x..x..x..x..x..x..x..x..::.xxx:x.xx.:.:.xx::x:x.:x......:xx.x..:...--x.....xx.x..x.:..:x.x.:...x:.-xx.:.x:....x.xx.....x.x:..x...--------------:x...x..x.x:....::..-..:x.xx..:.x...:.......x..:x.---------------x....x:...x..:x.x:.......:..x..x:----...x:::.xx:x.....xx:xx..:.x..x.....----......----...:x:.x.x...x..:.xx:.x...x..:..x.x.x.x..::x..----....x.x..:. 15M3D8M4D17M7D7M5I15M3D39M2D24M4D6M1D30M1D18M11D51M1D19M1D21M1I17M1I3M2I13M6I10M1D96M9I34M2I21M2D78M2I29M1D30M14I20M1D29M15I33M4I35M4D6M4D46M4I11M 471/781 60.3% 846/94230402 0.0% 116/781 14.9% -54841840 -39388562 +3039 chr4 + 190214555 576593 576592 576645 53 TCAGCGCTCCCCACCGCTCGGCGCCCCTGCGTCTGCGCTCCCCTCTCTCCCCT chr4 + 94230402 5160730 5160729 5160782 5160730 5160729 5160782 53 TCGGCGCTCCGCAGCGCCCCGCGCCCCTCCCGCAGCGCTCCTCTCTCTCCGCT ..:.......x..x...:.x........x.xx.x.......:........x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -4584137 -89646265 +3210 chr4 + 190214555 576883 576882 576942 60 GGGGGAGGGGCCGGGAGCTGGGGGGGGTGGGAAGGAGCCCGGGGAGGGAGGGGGAGGGGC chr4 + 94230402 625887 625886 625946 625887 625886 625946 60 GGGGACAGGGCAGGGAGCTGGGGTGGGCAGGAGGGAGCTCATGGACAGAAGGATGGGGGC ....:x:....x...........x...::...:.....:.:x...x:..:..:x:..... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -49004 -94181398 +3116 chr4 + 190214555 583543 583542 583621 79 CCTCTTTTTTTTCTTTCTTTTTTTCTGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTATAGAGACAAGGTCCCACTAT chr4 + 94230402 23978948 23978947 23979014 23978948 23978947 23979014 67 CTTATTTTTTTTCTTCCTCTATTCATGGCTTTTTTGTTTGTTTG------------TTATAAAGAGATGATGACACTAT .:.x...........:..:.x..:x...:...............------------.....:...x.x.:.xx...... 44M12D23M 53/67 79.1% 67/94230402 0.0% 12/67 17.9% -23395405 -70834997 +3134 chr4 + 190214555 583565 583564 583600 36 TTCTGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTT chr4 + 94230402 12568754 12568753 12568789 12568754 12568753 12568789 36 TTCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTT .....x.............................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -11985189 -82245213 +3068 chr4 + 190214555 583571 583570 583612 42 TTTTTTTGTTTGTTTGTTTGTTTTGTTTTTATAGAGACAAGG chr4 + 94230402 89314598 89314597 89314639 89314598 89314597 89314639 42 TTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGGGAAGG ..............................:.:::.:x.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -88731027 -5499375 +3005 chr4 + 190214555 585036 585035 585108 73 TGCCCCTGTAATCCCAGCTACTTAGGAGGCTGAGACAGAAGAATCGCTTGAATCCGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x....:.:..........:::........x.xx:x...x.:......:..:.:..x.xx:.x:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -75448169 -18782233 +3664 chr4 + 190214555 591585 591584 591658 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCCGGGGCCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x.xx.x...x::.........x.::..:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -75441619 -18788783 +3361 chr4 + 190214555 593305 593304 593395 91 TCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTTTCTTTCCTTCCTTCCTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 57538430 57538429 57538510 57538430 57538429 57538510 81 TCTCTTCTGATTTGTTACTT----------TTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ...:.:..xx...x..x...----------......:...x:...:........:..x.:x.::.::.......:x....:...:....:. 20M10D61M 58/81 71.6% 81/94230402 0.0% 10/81 12.3% -56945125 -37285277 +3083 chr4 + 190214555 595246 595245 595304 59 TGGGTTCTTTTTTGGTTCCATGTGAACTTTAAAATAGTTTTTTTTTTTTTTCTAATTTT chr4 + 94230402 66374445 66374444 66374503 66374445 66374444 66374503 59 TGAATTTTTTTTTCACTTTAAAAAAACTTTAAAAAAGCTTTTTTTTTTTTTCCAACTTT ..::..:......x::.::.x:x:..........x..:..............:..:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -65779199 -28451203 +3676 chr4 + 190214555 642336 642335 642436 101 CATGGTGGTGCATGCCTATAATTCCAGCTACTTGGGAGGCTGAGACAGGAAAATCGCTTGAACCTGGGAGGCAGAGGTTGTGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::........:.--.:..:.............::........x.xx.x:..x.:........::.:..x:xx:..:...:.------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% -75390861 -18839541 +3839 chr4 + 190214555 659389 659388 659472 84 GTGCCTAGGTGCCTGCA---ACTCCCAGTGTGTGTGCATCCGCATGTGTGCACGCACATGGGTGTCTGTGTGCATGTGTGTGCACAT chr4 + 94230402 5214236 5214235 5214321 5214236 5214235 5214321 86 GTGCGCAAGTGTCTGCACACACATCTA-CGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....x:.:...:.....---..x:.:.-:....:.....::.........::....x.:.x....x..::....x:........... 17M3I7M1D59M 62/83 74.7% 86/94230402 0.0% 4/83 4.8% -4554847 -89675555 +3750 chr4 + 190214555 659593 659592 659750 158 GTATGTGTGTGCGTGTGTGCATTGTATGAATGTGCACATGTGTACACATGTGTGTGCACATGTGTGCCCACGAGTATGTGTGTGCATGTGTGTGCACATGGGCGTTTGTGTGTGTGTGCCCGTGTGTGCACCCATGTGTGTGTGCTCACATGTGCACA chr4 + 94230402 5214175 5214174 5214318 5214175 5214174 5214318 144 GTGGGGGTGTGGATATGGGCACAGCAGCAGTG----CAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATG--CATTTGCATGTGTGTGC--------GCAAACGTGTGTGTGCATGCAGATGTGTGCA ..:x.x.....x:.:..x...:x.:.xx.:..----..x....:.x....x.:::...:x:.....:x.:.:...:.x..::::..::.x.::.:::...--.:....::.........--------...xx.:........:::x..x.....::.. 32M4D64M2D17M8D31M 90/144 62.5% 144/94230402 0.0% 14/144 9.7% -4554582 -89675820 +3058 chr4 + 190214555 691882 691881 691940 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -75341324 -18889078 +3298 chr4 + 190214555 701850 701849 701916 67 TGTAATCCCAGCTACTTGAGAGGCTGAGGCACGAGAATTGCTTGAACGTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:............:........x.x:.x...x::.......x::.:..x.xx:.....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -75331361 -18899041 +3408 chr4 + 190214555 711821 711820 711889 69 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::......--...x....:.:...........::........x.xx.x...x::.........:.:. 10M2D57M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -75321376 -18909026 +3453 chr4 + 190214555 771245 771244 771316 72 GCACCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::..:.....x.xx.x...x...........:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -75261961 -18968441 +3982 chr4 + 190214555 798144 798143 798217 74 GTGTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGTCAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:............:........:.xx.x...x............::..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -75235060 -18995342 +3124 chr4 + 190214555 800510 800509 800581 72 ACAGACACATATATGTGTATATACATACACACACATGTATGTATATATAAATATATGTGTGTGTGTGTGTAT chr4 + 94230402 55694437 55694436 55694508 55694437 55694436 55694508 72 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .....::.x:x.:.x:x.:...:......:........:.....:.:..xx:x:....::......:.:... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -54893927 -39336475 +3062 chr4 + 190214555 800549 800548 800604 56 TGTATATATAAATATATGTGTGTGTGTGTGTATATATATGTATATATATATATATT chr4 + 94230402 55694454 55694453 55694509 55694454 55694453 55694509 56 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATATT .....::...x...:.::.......:.......x:x:.....::.:.:........ 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -54893905 -39336497 +3520 chr4 + 190214555 800876 800875 800959 84 ACATGGTGACGGGCACCCGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTATTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::...--.x....x:...:.:............:........x.xx.x...x:.:........x.:..x.xx:..:..:.. 8M2D74M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -75232320 -18998082 +3196 chr4 + 190214555 813141 813140 813207 67 TGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATTGCTTGAACCTGGGAGCCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::...x....x.xx.x...x::........::.:...:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -75220070 -19010332 +3210 chr4 + 190214555 822314 822313 822402 89 TCTCTCCCTCTGCTCCCATCTCTCCCTGTCTCTGTTTCTCCCTGTCTCTGTCTCCCTCTGTCTCTGTGTCTCCCTCTATCTCTGTCTCC chr4 + 94230402 1174660 1174659 1174748 1174660 1174659 1174748 89 TCTCCCCCACGGCACCTACCTCATCCAGCCTCCACTTCTGCCTGTCCCTGTCTCCCCACCTTCCTGCTCCCCTCTGCTCTCCTGGCTTC ....:...x.x..x..:.:...x:..x.:...:::....x......:.........:x:x.::...:x:.:.:..x:x:::...x..:. 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% -352346 -93878056 +3817 chr4 + 190214555 833433 833432 833531 99 GAAGACAGAGGAAGGAGGAAGGTGGAAGGAGGAAGGGG--GAAGAAGGAAGGAGGGAGGGGGAAAGGAGGAAGGAGGGAGGGGGAAAGAGGAAGGGGGAAG chr4 + 94230402 890673 890672 890770 890673 890672 890770 98 GGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAG---AGTGGATGGGGGGAG .::.:.........::...:...:......:....x..--.:....:::..::x.x....:....xx..:::x..x.....:.---..x...x.....:.. 38M2I43M3D15M 67/96 69.8% 98/94230402 0.0% 5/96 5.2% -57240 -94173162 +3235 chr4 + 190214555 833469 833468 833546 78 GGGAAGAAGGAAGGAGGGAGGGGGAAAGGAGGAAGGAGGGAGGGGGAAAGAGGAAGGGGGAAGAGGGAAGGGAGAATG chr4 + 94230402 10675421 10675420 10675495 10675421 10675420 10675495 75 GGGAAGAAGAGAGAAAGGAAAG---AAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGAGTATGAGTCAAGGTAGGCTG .........::..:.:...::.---.......::.....x......:.::..:..x.:.x.x...xx....x..:x.. 22M3D53M 53/75 70.7% 75/94230402 0.0% 3/75 4.0% -9841952 -84388450 +3372 chr4 + 190214555 841370 841369 841436 67 TGCGTACATATTTGGGAACATTATATTTTCTTTTCTCTTTTTTATTTATTTATTTATTTTTTTTGAG chr4 + 94230402 24989010 24989009 24989075 24989010 24989009 24989075 66 TGCCCAGATGCTTGTGAAT-TTAGGTTTTCTTTTCTTTTATTTATTTGTTTGTTTGTTTTTTTTGGG ...x:.x..::...x...:-...x:...........:..x.......:...:...:.........:. 19M1D47M 51/66 77.3% 66/94230402 0.0% 1/66 1.5% -24147640 -70082762 +3096 chr4 + 190214555 847238 847237 847307 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -75185959 -19044443 +3414 chr4 + 190214555 908648 908647 908730 83 CATGGTGGTGCACACCTGAAGTCCCAGCTACTCCAGAGGCTAAGGCGGGAGGACTGCTTGAGCCCAGGAGTTTGAAGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--..x...:.........:x.:.....:..x.xx.x.:.x::.....:.....:..:..x::...::.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -75124549 -19105853 +3257 chr4 + 190214555 920179 920178 920250 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGTCAGGAGAATGGCATGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........:.xx.x...xx:.x.......:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -75113027 -19117375 +3254 chr4 + 190214555 923535 923534 923617 83 CGTGGTGGTGCGTGCCTGTGGTCCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCGCTTGAGTCCGGGAGTTCAAGACTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......::.--...:..:........:..::........x:xx.x.:.x.:.....::..:.:..:.:x:.:....:. 14M2D67M 53/81 65.4% 81/94230402 0.0% 2/81 2.5% -75109662 -19120740 +3296 chr4 + 190214555 937423 937422 937505 83 CATGGTGGTAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCACTGGGACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--.::.x....:.:...........::........xxxx.x...x....x.:......:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -75095774 -19134628 +3658 chr4 + 190214555 940318 940317 940390 73 TGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGCTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........::::........x.xx.x...x..........::.:....xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -75092887 -19137515 +3043 chr4 + 190214555 941377 941376 941445 69 AAAAAAAAAAAAAAAAAAAAGAAACAAAACAAAAAAAACTCTGTACTTTCTGCTCTATTTTTCTTTTTT chr4 + 94230402 68938765 68938764 68938833 68938765 68938764 68938833 69 AAAAAGAAACAGAAAAAAAAGAAACCGAAAAACAGAAACAATGAATTTCCTCTTCTCCCTTCCTTTGTT .....:...x.:.............x:..x..x.:....xx..x.:..:..x:...x::..:....x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -67997388 -26233014 +3734 chr4 + 190214555 962846 962845 962958 113 AGCACCCAGCCCACAGTGCCATCGCCACCACACACCAGCACCCGGAAGCAGGGCACCTGGGAGAACAGGTGGAGCCTAG--CGGGAGACAGGAAGTGTCCTCTACCAGCTGCGGG chr4 + 94230402 1818310 1818309 1818413 1818310 1818309 1818413 104 AGCACCCACCCCACGCTGCCATCGCCGCCGCACACCAGGATGCGGAAAGTGGAGAACTTCTGGAAGAGGCGCAGCCTGGAAAAGGGGGCAGAGAG-----------GGCTGCGGG ........x.....:x..........:..:........x.:x.....:xx..:x.x..xxx:...x...:.x.....:.--x:..:.:...::..-----------:........ 79M2I14M11D9M 73/102 71.6% 104/94230402 0.0% 13/102 12.7% -855464 -93374938 +5825 chr4 + 190214555 963059 963058 963265 207 GGCCGAGACAGCTGTGGCAGCCTCCTGGGGCCCTTCCCGCCCCTGCTGCTG----CCCTGGACCAGGGGTCCTGCTGGACTCACCCGGGAAGAGGACCTCCGTTGGTCAGGTCGAAGACCTGATGAGGGTTCAGTAGCTTCCGGAAGCTGCAGAGCAGGTCTCGGCCCTTGAGGCCTCCACTCTTGGGGTTCACGAACACAAGGAGGGGAC chr4 + 94230402 1818396 1818395 1818585 1818396 1818395 1818585 190 GGCAGAGAGGGCTGCGGGGTCCCGCTGGG----------CTCCTGCAGGTGACACCCCCGTGCCAGC-----------ACTCACCCCAGGTGTGGGCCTCCATTCATGAGGTCGAAGACCTGGGCAGGGTTGAGGAACTGCTTGAACTTGCGCAGGAACTTGACGCCCTGGTTGTCCCCACTCTTGGAGTTGACGAAGGCCAGGAGGGGGC ...x....x:....:..x:x..:x.....----------.:.....x.x..----...:.x:....x-----------........x:.:x.x..:.....:..x:.x..............:xx......x..x.:..x.:x...x:...:x..x.:x.:xxx.....x.xx.:.:..........:...x.....x:.x........:. 29M10D12M4I12M11D133M 129/186 69.4% 190/94230402 0.0% 25/186 13.4% -855337 -93375065 +4346 chr4 + 190214555 968330 968329 968655 326 GCCGCACGTCTTCCTGCAGACCTCGCAGCGCGCTCCCGAGGGCAGGTTCCCCTCCCGCCAGTGGTGGTGATGGGTGTCCTGCAGAGCGGGGGCAGTCAGCA--GCTGGGCCCGC----------CCCACCCCCCAGGGCT----------------------------CCCTGGGGCCGGTACACTCACGTGATCCTGGTGCCC----ATCCTGGTGGCACTGG-----------------CGGCAGTCACTGCAGGCGAAGGGCACACAGTCTGGGTGGAGGTGCAGCTCACACAC-TGGGGGGCAGGCAG-----GGTTAGAGGTGTCTGCCGCCCCCGGAGGACCCCTGCCTCTGCCGGTGCTTGGGTCTGCCCCATCCCCACCACCTAG chr4 + 94230402 1820571 1820570 1820941 1820571 1820570 1820941 371 GCCGCAGGTCCGGTCGCAGACGGCACAGCGTGCGCTCACGGGCAGGTTCCCCTCCAGCCACTGGTGGGGCATGGCCACCTAC-GGGCAGGGACAACCGTCACCCCTGGGCCACCACTCCATGCACCCAGCAGCCACGGGTGAGGACGGGGGACGCCAGGTGACGGTGGCCCCGCAGCGGGGACGCTCACCCCATCCTCATCCTCGATGATCTCGCTGCCAATGGATGCCAGCGTGGTCCACTTGCAGTTGTTGGTGGCTCTGACGGCGCAGCGCTTGTGCGCTTTGAACTTGCACACTTGTGGGGCGGGGAGGAGCAGGTGAGGGGTGAGCACGGCCCCT----GACCCCACCTTCT-----------------CCCCACCCCCACGGCCCAG ......x...:xx::......xx.:.....:..x.:.:x................x....x......x.xxx..:xx...:.-.:..:...:..::.:x..--x.......xx.----------....x.xx...x..x.----------------------------...:.x:..x..x..:.....x:x.....x:.x.:.----...::.x..x..x...-----------------:x.....:::..xx...xxx.:xx:.:...:x:xx...x:xx.xx.:..::.....-..x.....:..x..-----...x..:....xx::.x.....:----......xx.:...-----------------.....:......x:..:.. 82M1D18M2I11M10I16M28I36M4I16M17I56M1I14M5I23M4D13M17D19M 200/304 65.8% 371/94230402 0.0% 89/304 29.3% -852241 -93378161 +3491 chr4 + 190214555 978093 978092 978175 83 CATGGTGGCAAGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -75055104 -19175298 +3655 chr4 + 190214555 978455 978454 978528 74 GTGTGCCTGTAATTCCAGCTGCTCGGGAGGCTGAGACAGAAGAAACACTTGAACCCAGAAGGCGGAGGATGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:........:..:.::........x.xx:x...:................x:xx:..x..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -75054749 -19175653 +3370 chr4 + 190214555 978751 978750 978828 78 CGGTGG-GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....-..:.x....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 6M1I72M 55/78 70.5% 79/94230402 0.0% 1/78 1.3% -75054448 -19175954 +3855 chr4 + 190214555 980457 980456 980528 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...x.:.........:.:..x.xx:.....:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -75052749 -19177653 +3492 chr4 + 190214555 1034895 1034894 1034977 83 CATGGTGGCATGCGCCTGTAATTCCAGCTACTCGGGAAGCTGAGGTAAGAGAATCGCTTGAACCCAGAAGGTGGACGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:...........:.::.:......x:xx.x...x.:..............x.xx:x.:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -74998302 -19232100 +3282 chr4 + 190214555 1067728 1067727 1067810 83 GTGCTGCACGCCTGTAATTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTT----CCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......--....:..----...........::........x.x::x...x::...........:..x.xx:..:..:.. 10M2D7M4D60M 58/77 75.3% 77/94230402 0.0% 6/77 7.8% -74965473 -19264929 +3179 chr4 + 190214555 1077378 1077377 1077426 49 TTAGCCTGCCAGTCTTTTCTTTCTTTTTTCTTTTTTTTAGAGACAGGGT chr4 + 94230402 77695231 77695230 77695279 77695231 77695230 77695279 49 TTAGCTTGCCAGTTTTTTCTTTTTTTTCTCTTTTTTTGGGGGGGGGGGT .....:.......:........:....:.........x:.:.:x:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -76617853 -17612549 +3371 chr4 + 190214555 1082126 1082125 1082208 83 AAAAGGAAAAGGAAGGGGAAAGGGAAAGGAAAGAAAAGAGAAAAGAAAGAAAAACAGGCCAGCAAGAGAAATATGGACAAGTT chr4 + 94230402 94029714 94029713 94029796 94029714 94029713 94029796 83 AGGAGTGAAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAAGAGGGATGAGCT .::..x:...:..:....:::......x:..::.:...:.....:..:........::..:xxx.:x....x.x...::..:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -92947588 -1282814 +3049 chr4 + 190214555 1097476 1097475 1097534 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -74935730 -19294672 +3331 chr4 + 190214555 1097936 1097935 1098007 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx:x...x.:.........:.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -74935270 -19295132 +5257 chr4 + 190214555 1100713 1100712 1100849 137 TTTCCATATTGAAGTTCCAACTTTTGACTAACAAATGGTCTCT-ATCATCATAT-TTGACCACTATGGCTGAATTTTACGTCAGAAATT----AGATGATTTCAGACAAAAATGACCCATTACTGGAATCATCAGGTTCTTCA chr4 + 94230402 82518748 82518747 82518890 82518748 82518747 82518890 143 TTTCCATGTTCAGATCCCAAACCTTGACAGTGAGGTAATCTCTTGTTAGCATGTATCTACCGCTGTGACTGAATTTGACATCTGACACTGAAGAGATAATTTCTGAAAAAAATGATCTGTTACTGGGGTCTTCTGGTTCTTCA .......:..x.::.:....x::.....x:xx.::.::.....-:.:.x...:.-.:x...:..:..:........x..:..x..x.:.----....:.....x..x........:.::.......::..x..x......... 43M1I10M1I34M4I50M 97/137 70.8% 143/94230402 0.0% 6/137 4.4% -81418035 -12812367 +6663 chr4 + 190214555 1100856 1100855 1101011 156 ATGCCTATCACAGAGGGCAGACGCTCTCATGTCACATGAGCAAATAGTTCCTTTACTGCTGCTAGATACAGATGTGTTATAGCTGTTCAGATGGAATTCTGCGGCTGAAATCAC--CTGTTAGCTCTTCCATATTGTCAGGCTTGATATCCACAATAT chr4 + 94230402 82531893 82531892 82532050 82531893 82531892 82532050 158 ATGTTTGTCACAGAGGGCTGATGCTCTCATGTCACAGAGTCTCAGGGAGCCTTTGCTGCTGCTGTAGACAAAGAGATTGCAGTGATGGGGATGAAACTCAGAGGCTGTAATTACTTCTGTCAGGTCCTCCATATTGGCTGGCTTTATATCTACAATGT ...::.:...........x..:..............x::x.xx.x:.xx.....:........:x.x...:.x:x:..::..:x:.xx:....:..:..x.x.....x...:..--....:..x..:.........x.x.....x.....:.....:. 114M2I42M 110/156 70.5% 158/94230402 0.0% 2/156 1.3% -81431037 -12799365 +4979 chr4 + 190214555 1101195 1101194 1101318 124 ACTCACAGTGCAGTAGCCGTGGTGGCATCTCTACACACCCCATCTTCCTCTTC-AAGTTATATCCTTCTGGTCTTTTGTCCCTTTCACTGATTTTCCATAATTGTATTGTTTTATTATTGGTAGA chr4 + 94230402 82550872 82550871 82550996 82550872 82550871 82550996 125 ACCTGTAGTGATGTTACTGTAGAAAGATCTTTAAGCTTTCCTTCTTCATCTTTTAAGTTGTACCCCTCTGGCCTCTTATCTCTTTCAGTAATTTTCCATAACTTGATTGTTTTATCTTTAAAAGA ..::::....xx..x:.:..:.x::x....:..x:.x::..x.....x....:-.....:..:..:.....:..:..:..:......x.:...........:.xx..........:x..::x... 53M1I71M 84/124 67.7% 125/94230402 0.0% 1/124 0.8% -81449677 -12780725 +6132 chr4 + 190214555 1101301 1101300 1101446 146 TGTTTTATTATTGGTAGACAA----TACTGAGCAGAATTTTTCTCAGGGAAACCACCTAGCTTTGTTGAACTTTTCTTCTCTTTCTAAACTTTTCAAGTGGTCAAACTCTGGCTCATCGTTCTGAAAGGTCCTGTAAACATGGTATTCCC chr4 + 94230402 82555320 82555319 82555468 82555320 82555319 82555468 149 TATCTTACCATTTGTTGATAAAAGTGAGTGAGCTGCATTTTGCT-GCGGTAACCACTTGATCTTGTTTATTTTTTCTTCTATCTCCAAGCTCTTCAAATAATCAAATTCAGGTTCATGGCTCTGGAAAGTGCTGTAAACATTGTACTCCC .:.:...::...x..x..:..----x.x.....x.x.....x..-:x..x......:.::::.....x.x:.........x.:..:..:..:.....:.::.....:..x..:....x.:....:..:..x..........x...:.... 21M4I19M1D105M 104/145 71.7% 149/94230402 0.0% 5/145 3.4% -81454019 -12776383 +3115 chr4 + 190214555 1136510 1136509 1136571 62 TCATCTCTCTATCTCTCTTGAACTTACTTTCTTTTTCTTGTTTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 29054624 29054623 29054683 29054624 29054623 29054683 60 TCATCTCCCC--CTTTCTTAAGCTAAACTGGTTTTTGGTGTTTTTTGTTTGTTTGTTTGTTT .......:.:--..:....:.:..x.x:.xx.....xx........................ 10M2D50M 48/60 80.0% 60/94230402 0.0% 2/60 3.3% -27918114 -66312288 +3239 chr4 + 190214555 1138299 1138298 1138396 98 TTTTAGTTTTA--GTGTTTTTTTGGTTTGGTTTTGTTTTTGTTTGTTTGTTTGTTTTTTGAGACGGAGTCTAGCTCTGTCGCCCAGGCTGGAGGGCAGTG chr4 + 94230402 22701633 22701632 22701715 22701633 22701632 22701715 83 TTTTATTTTCACAATGGATTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAGGTAAGA-----------------AAGGGGGAGGGCAGTG .....x...:.--:..xx...:..x.x.......x........................::.xx:..-----------------.:.xx........... 11M2I54M17D16M 64/81 79.0% 83/94230402 0.0% 19/81 23.5% -21563334 -72667068 +3199 chr4 + 190214555 1138318 1138317 1138364 47 TTGGTTTGGTTTTGTTTTTGTTTGTTTGTTTGTTTTTTGAGACGGAG chr4 + 94230402 29671947 29671946 29671992 29671947 29671946 29671992 46 TTGTTTTGGTTTT-TTTTTGTTTGTTTGTTTGTTTTTTGGGGGGGAG ...x.........-.........................:.:x.... 13M1D33M 42/46 91.3% 46/94230402 0.0% 1/46 2.2% -28533629 -65696773 +3127 chr4 + 190214555 1174482 1174481 1174536 55 ATCTCAAAAAAAAAAAAAAAACAAAAAAACAAAAAACAAAAACAAAAAAAACTAA chr4 + 94230402 45589522 45589521 45589576 45589522 45589521 45589576 55 ACCACAGGAAAAAAAAAAAAACCAAAAACCAAAAAACAAAAACCACCAAATCTGA .:.x..::..............x.....x..............x.xx...x..:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -44415040 -49815362 +3442 chr4 + 190214555 1184800 1184799 1184879 80 CATAGTG-TGTGCCAGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:....-..::.xx...:.:...........::........x.xx.x...x.............:.:x:xx:..:..:.. 7M1I73M 57/80 71.2% 81/94230402 0.0% 1/80 1.2% -74848397 -19382005 +3669 chr4 + 190214555 1256799 1256798 1256904 106 TTTGTGTGTTTTTTTGTTTGCTTGTTTGTTTTATTAATATAGTAACCAACCTAATGGTGTTAGGTGGTATATCATTGCAGTTTTGTTTGGTTTTTGTTTTGTTTTT chr4 + 94230402 42146230 42146229 42146334 42146230 42146229 42146334 105 TTTATGTCTTTTTTTGTTTGTTTGTTTGTTTTACTAATAACATGA-TGACATAATGTTCTTAGCTGCAAGGCAAGAGAAGtttcctttttattttcctttcttttt ...:...x............:............:.....xx:.:.-::..x.....x.x....x..xx.x::x.xx.x.....:x...xxx....x:...x..... 45M1D60M 74/105 70.5% 105/94230402 0.0% 1/105 1.0% -40889431 -53340971 +3459 chr4 + 190214555 1293261 1293260 1293333 73 GTGCGCCTGTAGTCCCAGCTAATTGGGAGGCTGAGGCGAGAGGATCACTTGAG-CCAGGAGATCCAGGCTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.......x...::........x.xx.x.:.x.......:-....:..x.:::......:. 53M1I20M 54/73 74.0% 74/94230402 0.0% 1/73 1.4% -74739943 -19490459 +3454 chr4 + 190214555 1303271 1303270 1303331 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTAAACCGGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........x.xx.x.:.x.....:....x:.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -74729933 -19500469 +3023 chr4 + 190214555 1306386 1306385 1306457 72 GCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGACAATCACTTGATCCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.:.......::::........x.xx.xx..x.......x...:.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -74726820 -19503582 +3638 chr4 + 190214555 1313895 1313894 1313976 82 GTGGTGACACACACCTGTAGTCTCAGCTAATTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCCAGGAGGTCGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......::......x...::........x.xx.x...x.:.....:.....:..x.:x:..:..... 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -74719306 -19511096 +3016 chr4 + 190214555 1381658 1381657 1381708 51 GCTCTCTCTTCTTTTTACTTTGATTTGGCTTTTTTTTTTTTTTTTTTTGAA chr4 + 94230402 71217973 71217972 71218023 71217973 71217972 71218023 51 GCTCTCTCTACTCTGTACTATGTTTTGGTTTTATTTTGTTTTTTTTTTTAA .........x..:.x....x..x.....:...x....x..........x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -69836315 -24394087 +3061 chr4 + 190214555 1384286 1384285 1384374 89 CCCAGGTCAGTGCCTGCGTATTTCTGCAGCGGTGACTTCAGGGAGGGCGATGACTGCAAAGGCGGGCAGAACGGGGGTCCACGCGTCAG chr4 + 94230402 14373614 14373613 14373702 14373614 14373613 14373702 89 CTCGGGTAAGGGGCTGGTGACTTTTTCAGTGCTGACTACAGGGAAGGTGAAGGCTGCCGAGGTGGGGCTCATGGGGATGTAGCCGTCAG .:.:...x..x.x...xxx.:..:.x...:.x.....x......:..:..x.:....x:...:...xxxx.:....:.x:.xx...... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -12989328 -81241074 +3430 chr4 + 190214555 1393424 1393423 1393497 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::....x...x.xx.x...x::.........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -74639780 -19590622 +7943 chr4 + 190214555 1402998 1402997 1403417 420 CACCGCCGGGCTCGACAGGAACGGCAGCTGCGCGGCGCACACCAGGCCTCCGGGGCCGTGCGCCGGGTACCCGGCCGGGCCGTGCATGCCGAGCGGGGCG--------CCCATGGGCGGCGAGGGGCTGAGCGGGCTGAGGCCGCCGGGCAGCCCCGTGCCAGGCCCGGCCCCCGGTCCCGGTCCGCCCCCGCCGCCG--GTCGGAGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTTCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGACAGCGCCAGGTTGAGGCGCTCGCACACC---GACAGGTAGCGCGTGGCCTTGAACTTGTTCTCCAGCGCCACGAGCTGCTCGTAGGTGAAGGCGGTGCGCGCTCGCCGCGGCTTCCCGGACT---TGGAGTCGGACCC chr4 + 94230402 67334110 67334109 67334517 67334110 67334109 67334517 408 CACCGCTGAGC---ACACCGACGGCCTCTGCCCG--------CGGGCTCCGACGGCGTCGCCCGAGGTGTCC-------CCGCCGATTCAGAGCGGGGAGATCTCCTTCTCCTCGGTGGCCGAGGATGG---GGACAGGGACTCCTCGTC--CTCCGACCTGGGGAAGTGGCCCTGGCCCGTGCCGCACTTGCAGCCGCCGTGAGAGCTCCGCGG--GGCGCCTTTGCCCTCCTTCTTGTGCTTGACGCGGCGGTTCTGGAACCAGATCTTCACCTGCTTCTCGGAGAGGTTCAGGTACGTGGCTATCTCGATGCG---GCGCAGCCGGGACAGGTACATGTTGGACGAGAACTCCCGCTCCAGCTCCAGGAGCTGCGTGCTGGTGAACGCCGTCCGCATCCTCTTCCCATTCTGGATCTGACTGGAATCGGACCC ......:.:..---...xx:.....xx....x..--------.:...::.x:x...xx:..x.x:...::..-------...:xx..x.x........x.--------.:.x.x..:...x::..::x.---..:.x.:.:.:x.:x.x.--.:...xx.::..xxx.xxx...x.x....xx....x.::..x....--..x:....x.:.xx.--......:xx.::..x......x::....::x..............................x......x....:.x..xx..:xx..:.xx.:..x...---..:..x.---........xxxxx...x.xx.....:x:x.......x...x.......x:.:x......x..x..x...:::.x.:x.xxx...:x.:x..---....:........ 11M3D20M8D30M7D21M8I21M3D18M2D46M2I15M2D99M3D7M3I91M3I13M 257/392 65.6% 408/94230402 0.0% 44/392 11.2% -65931112 -28299290 +7398 chr4 + 190214555 1403104 1403103 1403640 537 GGCGGCGAGGGGCTGAGCGGGCTGAGGCCGCCGGGCAGCCCCGTGCCAGGCCCGGCCCCCGGTCCCGGTCCGCCCCCGCCGCCGGTCGGAGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTTCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGACAGC-GCCAGGTTGAGGCGCTCGCACACCGA-CAGGTAGCGCGTGGCCTTGAACTTGTTCTCCAGCGCCACGAGCTGCTCGTAGGTGAAGGCGGTGCGCGCTCGCCGC-GGCTTCCCGGACTTGGAGTCGGACCCCGTGCGCTTCCGCTTGGGCTTCGCCGCCGTCGCC-GTGCCCTGCGGGGTGGTCCCCGCGCCCCCCGGCG-CCGCTGCACCTCCCGGTGGGCCCTGGGCAACGGGCGAGTTC--TCGCGGGGTCCGGGGGCCGCTGCCTCGTCGACGGTGGCTCCGGGGGACGCGTCGGTCTCAGCCGCGCCCTGGCAACCCGACCCG-CGGGCCCCGAGGCCGCCGCCGCCTCCCCGC chr4 + 94230402 84411214 84411213 84411675 84411214 84411213 84411675 462 GGCGGCGGGAGGCGGAGGGGGCT-----CCCCTGGGGGTTCCG--CTTGGCTCGGACCC---------TCGGGTTCAGCCGACAG----------------------------CTGTCTCTTGAGCTTGTTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGTGCAGCG-CAGCGGCCAGACCGGCCCGCTCG-GCGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTCTTGGAGAAGATGGTCCGCGTCTTCTTCTTGCCTCCC------GCCGCTGAACACCTGCCGCTCTCTCT--------ACCGCAGCCCCCGGTATCCCGCAG--------CGACGGCTGTCGGCATCCGCGGAACCTCTCCGTGGAGAGCGGTGAAACCGCGCCTTCGGCCTCGGCATCCGCGCGGCGCGGCCCTTCCGCCAGCAGCCTC--------------TCGCTGCC-TGCAATGGCAAAACACAGCGTCAGCCCCCCACCCTGCCGCCGCCGCCCCGC .......:.:...x...x.....-----.x..x..x:.::...--.:x...:...x...---------..x.x::.x....x.:.----------------------------...::....xx:....x.x..........................................:xx....-....-.....:::.:xx......-:.:.:.x-..........x.x:.x.:...xx..xx.......xxx.x..x...x::x.x..x....::...x....:::x.:x.-x..:....------.xx.::.:..x..xxx....::.x..--------:....x.:.x..-..::..:..:.--------.x:..x.:x:....:-....x.x.....:.x....:xxx:..xx..xxx...xx...--:.x...x:....x.x.x...x...::x:..x.:.::..::.--------------..x.x...-:..xx......xx.:xxx..-.:.x....x.xx.:.........x...... 23M5D15M2D14M9D17M28D68M1D4M1I18M1D7M1I76M1I8M6D26M8D12M1I11M8D15M1I41M2I41M14D8M1D20M1I30M 303/454 66.7% 462/94230402 0.0% 91/454 20.0% -83008110 -11222292 +8150 chr4 + 190214555 1403202 1403201 1403541 340 GTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTTCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGACAGCGCCAGGTTGAGGCGCTCGCACACCGACAGGTAGCGCGTGGCCTTGAACTTGTTCTCCAGCGCCACGAGCTGCTCGTAGGTGAAGGCGGTGCGCG----CTCGCCGCGGCTTCCCGGACTTGGAGTCGGACCCCGTGCGCTTCCGCTTGGGCTTCGCCGCCGTCGCCGTGCCCTGCGGGGT-----------------GGTCCCCGCG-------CCCCCCGGCGCCGCTGCACCTCCCGGTGGGCCCTGGGCAACG--GGCGAGTTC---TCGCGGGGTCCGGGG chr4 + 94230402 84420716 84420715 84421082 84420716 84420715 84421082 367 GTCGGCGGCGAG---CTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAAATCTTCACCTGCGTCTCGGTGAGGTGCAGCGAGGCGGCCAGGCCGGCCCTCTCGGAGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTGCGGCTGAACACCGTGCGCGTCTTCTTCTTGCGGCCGGC--GGCTCGCTGCTCCGCTTCGCCCGCTTCCTCGCCGCGTTCCTCCTCTTCCTCGCGGCCTCCGGAGCTCTGCCTcccgcccgcggggccccgcgccgccgcccgcccgccgccgcccgcccgcTCCGT-GTCCTCGGGCAGCTCCGGCGAGTCCCGGTCGCTGGCTGCGGAG .......x.x:.---....:x..........x.x.................:........................:xx.....x:xx......::.:xx.x....x.xx:xxx..........x.x:.x.:...xx..xx.......xxx.x..x...x::.::.x....x:.x.......----..:x::.....:xx.--.:..:.xx.::xx:.::..:x.......x.x:x.xx...x:.x:.x..x:..:.x...x...:.:-----------------..x.......-------..x....x......:xxx..x.:.x..-.x..::.....:.x--.......:.---....x..x.x...:. 12M3D167M4I15M2D65M17I10M7I27M1D14M2I9M3I15M 225/334 67.4% 367/94230402 0.0% 39/334 11.7% -83017514 -11212888 +3225 chr4 + 190214555 1417384 1417383 1417475 92 TAAAATTACAAAATTATCGAGGCATGGTGGTGGTTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGACAGGATAATCACTTGAACCCGGGAG chr4 + 94230402 76033176 76033175 76033264 76033176 76033175 76033264 89 TAATGTCATGAAAGGAT-GATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x:.:.::...xx..-..x:..::......--::.x....:.::..........::........x.xx.xx..x...........:.:.. 17M1D14M2D58M 62/89 69.7% 89/94230402 0.0% 3/89 3.4% -74615792 -19614610 +7321 chr4 + 190214555 1467687 1467686 1468115 429 TGGTGATGGTGATAATGGTGTTGATTGTGATGATGGTGGTGATGATGGTGATTATGGTGATGGTGATGATGATGGTGGTAGTGATGA---TGGTGGTGATGGTGATGATGATAGTGATGATGATGGTGGTGATGGTGGTGATGATAGTGATGATGGTGGTGATGGTGATGGTGGTGGTGGTGATGATAGTGATGATGGTGGTGATGGTGGTGATGATGGTGATGATGGTGGTGATGGTGGTGATTATGGTGATGATGATGGTGGTAGTGATGATGGTGAAGATGATGGTGATGGTAATGATGGTGGTGATGGTGATGATGATGGTGGTGAT---GGTGGTGATTATGATGATGGTGATGGTGGTGACCATGGTGATGACGATGATGGTAGGGATGATGGTGATAGTAATGGTGATGCTGCTGCTGATGGTGATGG chr4 + 94230402 92132510 92132509 92132935 92132510 92132509 92132935 426 TGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGG------ATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGA---TACTGGGGACGCCCCCACAGATACTGGGGG ...x..:.xx.:x:...x..xx..:xx..:x:...x...x..x.....::..xx...x....x...x..::x...x.:.:x..:x..---x.:::..:x...x..:xx..:x::..x...x....x...x..x.x...::..:x.:.x..::x...x:::::...x....x...x.:..x..:x..:.x..:x...:x.x.x..x.x.:.:::..x...x..:xx:..x.:::x.x:x.------...x...x..x..........x..:x....x..::....x...x....x.:::....x...x:.:.x..:x..::x...x..x.x.---:.x....x.x:x..::x...x....x...x..xxx...:::.xx:.xx..::x.:....::x...x..---..x...x..:..:x.::.x...:x..:x.. 87M3I149M6D86M3I68M3D30M 244/420 58.1% 426/94230402 0.0% 15/420 3.6% -90664823 -3565579 +3279 chr4 + 190214555 1481404 1481403 1481486 83 CATGGTGGCATGTGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGCAGAATCACTTGAACCAGGGAGTCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x.xxxx...x..........x:.:..::xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -74551793 -19678609 +8940 chr4 + 190214555 1514572 1514571 1515018 447 TGGTGACACTGAGG-TGATGGTGGTGGTAGTGGTCATGATGGTGGTGGTGATGGTGGTGATGATGGTAATGGTAGTCATGGTGATGGTGATGGTGATGGTGGTGATGATAAAGGTAGTGGTGATGGTGGTGGTGATGACAATGATGGTGATGGTGATGATAGTGGTGATGGTGGTAATAGTGATGACGATGGTGGTGGTGATGATGGTAACAATGGTGATGGTGGAGATGGTGA------TGGTGGTGATGGGGATGATAGTGGTAGTGACGATGGTGGTGGTGATGATGATGGTGATGATGATAGTGACAGTGATGATGGTGATGGTATTGGTGATGGTGATGATGGTGATAGTGATGGTGGTGATAGTGATG------GTGGTGGTGGAGATATGATGGTGATGGTGATGGCGGTGATGTTATTGATGGTGATGGTGACAAAGATGACACTGGTGATG chr4 + 94230402 92132465 92132464 92132916 92132465 92132464 92132916 452 TGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTG------GGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACAT--TGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG ...x.......:..-..x...:::..x.:.x..::x.::x.x..x...x..:.xx..x....x..:x:.::x.:.xx...x..:x.:x.....::...x...x....x.:.:.::.x...x....x...x.:x:xx....:.:x...x..:xx..:x...:x..:x....x..------.x..x.x:.::::.:x...x..::x...x....:...x....x...:....x..:------...x.:.:x.x....x.x...::..:x..:x..:xx:..x.:::x.x.x....x...x..x...:...::.x..:x....x..:x.:.:....x....x..::....x..:x.::.x...x.:::x.:.x.:x.------.x....x...:..:..--...x....x..:x.:x.x..:::x.x...xx.:::x...x....xx.:x..:.....x..:. 14M1I158M6D55M6I134M6I16M2D62M 262/439 59.7% 452/94230402 0.0% 21/439 4.8% -90617893 -3612509 +6444 chr4 + 190214555 1515058 1515057 1515459 402 GATATTGATGGTAGTGACGATCATGGTGG---TGGAGATGATGGTGATGGCGGTGATGATGGTGATGGATGGTGGTGGTGGTGATGGTGATGATGGTGATGGTGGAGATGATGGTGATGGTGATGGTAATAATGACAGTGGTGATGGTGG------TGACAATGGTGGTGATTGTGATGGTGGTGGTGGTGGTGGAGATGATGG---TGCTGGTGATAATAATGACAGTGGTGATGGTGGTGATGATGGTGA---------------------TGACTGTGATGGTGATGATGGTGATGATTGTGATGGTGATGATGATGATGATTGTGATGGTGGTGATGGTGATGATTGTGATGGTGATGGTGATGATGGTGATGACTGTGATAGTGATGG-----TGATGATTGTGATGGTGATGGTTGTGATGGTGGTGATGATGG chr4 + 94230402 92132469 92132468 92132875 92132469 92132468 92132875 407 GACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATG-------TTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTG------------------AGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATG------GTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGG--GTGTTGGGGACATTGGAGATGTTGGGGAAGCTGG ..:.:..:x.:.:x..:.:..xx...x..---.:.:.x..x...x..:.xx..x....-------.x..x.:::x...x::..x...x..x.....::...x........x..------------------.x....x...x....x...------x....:.:x...x..:.x..:x.:..x..:x.:..x...:..x.x...---.::...x..:.x.::x:.......x....x...x....x...x..---------------------.::.x...x...x..:xx:..x..::x..:x....x...x..x....------...:.:x...x....x..:x...xx..:x.:..x...:....x...x:.:.x:x.x..:.x..:x..-----...x.:--...x...x..::x.x.x....x...x..x.x... 29M3I26M7D48M18D19M6I48M3I45M21I47M6D67M5I6M2D34M 239/369 64.8% 407/94230402 0.0% 71/369 19.2% -90617411 -3612991 +5811 chr4 + 190214555 1515084 1515083 1515494 411 TGGTGGAGATGATGGTGATGGCGGTGATGATGGTGATGGATGGTGGTGGTGGTGATGGTGATGATGGTGATGGTGGAGATGATGGTGATGGT---------GATGGTAATAATGACAGTGGTGATGGTGGTGACAATGGTGGTGATTGTGATGGTGG------TGGTGGTGGTGGAGATGATGG---TGCTGGTGATAATAATGACAGTGGTGATGGTGGTGATGATGGTGATGACTGTGATGGTGATGATGGTGATGATTGTGATGGTGATGATGATGATGATTGTGATGGTGGTGATGGTGATGATTGTGATGGTGATGGTGATGATGGTGATGACT------GTGATAGTGA---TGGTGATGATTGTGATGGTGATGGTTGT---GATGGTGGTGATGATGGTGATGGTGATGATGGTCATGATGATTATGGTGGTT chr4 + 94230402 92132507 92132506 92132937 92132507 92132506 92132937 431 TGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGT-------TGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGA---AGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACGCCCCCACAGATACTGGGGGCT ..x...:..:.xx..x....x:.:x..::x...x:...x-------...x.:x.....::...x...x....x..::..::x...x....x.---------..::...x.::x...xx...x....x..:x..::x...x.:x.x.x.::..:x...------...x::::.........x...---..:...x..:.x.::x..:.x.x.x..x.x.:.:::..x...x..:xx.x.x..::x.x.x....x...x..---x.......:.:x..:x....x.x.x....x...x....x..::...xx..:x:::.x...x..::x...x.:x.x:.------...x.:.x..---...x....x.x.x..x.x..:::..:x.---..::x...x..::x...x...:x..:x..:.x:.x::xx...xx...x..:. 39M7D46M9I56M6I21M3I72M3D77M6I10M3I28M3I52M 240/401 59.9% 431/94230402 0.0% 40/401 10.0% -90617423 -3612979 +3128 chr4 + 190214555 1558534 1558533 1558595 62 ACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAGAAAAAAGGAAA---GCAAAGG chr4 + 94230402 16379599 16379598 16379663 16379599 16379598 16379663 65 ACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAGG ...:....:.x......x:.....x....x.........:..::..x..:....:---:...... 55M3I7M 48/62 77.4% 65/94230402 0.0% 3/62 4.8% -14821065 -79409337 +3211 chr4 + 190214555 1578740 1578739 1578847 108 GGGAGGGGAGGGCAGGGCAGGGAAGGGGCG---GAGGAGGGGAGAGAAGAGGGGGAGAGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338924 70338923 70339031 70338924 70338923 70339031 108 GGGAGCCGGTGGCCAGACA---AAGGGGCTCTTTGGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG .....xx.:x...x:.:..---.......x---x:...:...::.:..:..:::..:.x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 19M3D8M3I78M 66/105 62.9% 108/94230402 0.0% 6/105 5.7% -68760184 -25470218 +3004 chr4 + 190214555 1578789 1578788 1578865 77 GGGAGAGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338955 70338954 70339031 70338955 70338954 70339031 77 GGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ....::..::.:..:..:::..::x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 77M 46/77 59.7% 77/94230402 0.0% 0/77 0.0% -68760166 -25470236 +3135 chr4 + 190214555 1578807 1578806 1578883 77 GGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338955 70338954 70339031 70338955 70338954 70339031 77 GGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ....:...::.:..:..:::..::x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% -68760148 -25470254 +3135 chr4 + 190214555 1578825 1578824 1578901 77 GGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338955 70338954 70339031 70338955 70338954 70339031 77 GGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ....:...::.:..:..:::..::x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% -68760130 -25470272 +3135 chr4 + 190214555 1578843 1578842 1578919 77 GGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338955 70338954 70339031 70338955 70338954 70339031 77 GGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ....:...::.:..:..:::..::x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% -68760112 -25470290 +3135 chr4 + 190214555 1578861 1578860 1578937 77 GGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAGGGGAGAGAAGAGGGGGAG chr4 + 94230402 70338955 70338954 70339031 70338955 70338954 70339031 77 GGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ....:...::.:..:..:::..::x.....:...::.:.:....:x:.::.:..x..x....x.:.:....x.::.. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% -68760094 -25470308 +3243 chr4 + 190214555 1585219 1585218 1585291 73 AATAACTGAAATTT-----TGTACCTTTTGACTAATAATGTCTCTACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 21794556 21794555 21794631 21794556 21794555 21794631 76 AATAACTTGAACTTGAAATTGAATATTCT--CCAATATTGACACTGTTCTCTCTCTCTCTCTCTTTTTTTTTTTTATT .......x:..:..-----..x.:x..:.--.:....x..x.x..::............................x.. 14M5I10M2D47M 57/71 80.3% 76/94230402 0.0% 7/71 9.9% -20209337 -74021065 +3104 chr4 + 190214555 1585258 1585257 1585293 36 TACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 6554021 6554020 6554056 6554021 6554020 6554056 36 TATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..:.................:............... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -4968763 -89261639 +3338 chr4 + 190214555 1594703 1594702 1594785 83 GTGGTGGCTCCACACATGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGGATCACTTGAGTGTAGGAGTTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG------CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......------...:......:.........::::........x.xx.x.:.x.......::x:..:..:.xx:.....:.. 6M6D71M 55/77 71.4% 77/94230402 0.0% 6/77 7.8% -74438498 -19791904 +14901 chr4 + 190214555 1602194 1602193 1602643 450 GGCATAATTGGATAATTCCATTTTA-------------------AGAGATCTGGGGCAAGAAGCCCTGCCGGGGGAGCTGGGCCCCCACCTCCCAAATTGCCTCCAAATGAAAGTCTGTTTAGGT-----GGCTGCAGGGGCAGGGGAGGGGCAGTGGGTGCAACACACAGGCAGAGGTGCCGGTCTTGCCGTCAATTCCCT--------GGCCAGGAAGGTGGCGACA--GGCT-----------GGGGTCTCTGGCCCACACAAAGGCT---GCGGCAAATGAAATGGTGTCTGCCTGCTTATGTGAAGAGTGATGAAACTTTAAATGAATCGCTGACCTTTCTGGAATGACAGGTGACCCGAGAGATATCTGAGGTGGGTATCGGCAGCGG-CCTCGAAAATTGCTG-CTGCTGCCCGAAAATAAACAATAAGAGAGCAAATGTGGTTTG--AAAAATTGACTCGCTTCAAAGCTGGGGGGAGAGAAAGTGAATTATTT chr4 + 94230402 87221906 87221905 87222387 87221906 87221905 87222387 482 GGTATAATTGTGTAATGCTATTTCAGTTTTTACGAATGATGAGAAAAAAATCAGAGCAAGAAAC---------AGAGATCTACAAAAGTCCTTCGAATTGACTCTAAACGAAATTCTGTTTAGGTCCACATACTTC----------TACTGGTAGTGCATACGAGACGTATGATAAGATAATGATAATAATGTCAATTCTCTCTTTCTTAGGCAGGGAATAAGATTACATAGACTTTGTTACTACAGAGGCCTATCACTGCTGCAAAAGCCTGCACTGTGAATGAAATGGTATTTGCCTGTTTATGTGAAGAATGATGAAACTTTAAATGAATCATTGACCTTTCTTGAATGACATGTGACCTGTAAGATATCTGAGCTGTATATCAAGAGCAGTTCTTGAAAATTGCTGTCTGCTGACCGAAAATAAACAATAAGATATCAAATATGGTTTGAAAAAAATTGACTTGGTTTAACACTGGGGGGA-AAAAAATGAATTATTT ..:.......x:....x.:....:.-------------------.:.:.x:::.:.......:.---------:...x.xx:.xxxx::.:::.:.....x...:...:....x...........-----x:..x.----------x.xx..:....x:.:.:.x..::.x.xx:..:.:x:.:.xx.:x:........:..--------...x:....x:x.::x...--.:..-----------.:..:..x.x:.:xx::....:..:---:.x.::...........:.:......:...........:.....................::..........x........x......:.x:...........x..x:....::x...:.-:..:...........-......x...................x.x.....:.......--...........:.x..:..x:.........-.:...:.......... 25M19I20M9D52M5I6M10D56M8I19M2I4M11I25M3I120M1I15M1I42M2I30M1D16M 312/430 72.6% 482/94230402 0.0% 72/430 16.7% -85619712 -8610690 +3377 chr4 + 190214555 1620668 1620667 1620735 68 ACAAAAAAAAAGAAAAAGAAAGAAAGAAAAAACACCACCACCACCACCACCACCAAAAACAAAAACAA chr4 + 94230402 42575001 42575000 42575067 42575001 42575000 42575067 67 ACTAATGACATGAAAATGCAAAACAAAAAAAA-ACCACCACCACCACCACCAACAACAACAACAACAA ..x..x:.x.x.....x.x..:.x.:......-...................x...x.....x..... 32M1D35M 54/67 80.6% 67/94230402 0.0% 1/67 1.5% -40954333 -53276069 +3211 chr4 + 190214555 1620669 1620668 1620735 67 CAAAAAAAAAGAAAAAGAAAGAAAGAAAAAACACCACCACCACCACCACCACCAAAAACAAAAACAA chr4 + 94230402 45244340 45244339 45244398 45244340 45244339 45244398 59 CAAAGGAAAAGATAAATAAAACAAAACAAAAC--------CACCACCACCACCAAAAGCAACAACAA ....::......x...x...:x..:.x.....--------.................:...x..... 32M8D27M 49/59 83.1% 59/94230402 0.0% 8/59 13.6% -43623671 -50606731 +3383 chr4 + 190214555 1620684 1620683 1620851 168 AGAAAGAAAGAAAAAACA--CCACCACCACCACCACCACCAAAAACAAAAACAATGATGAAAACATCAACAGAAATAACATCACTGCCAACAA------CAA--CAACATAAGCAACAGCA--------------ACACCAAAAC-ACAACACTGCCATCAACACGGTAGCAGCAACCACAGCAAAAGTCAAC chr4 + 94230402 10318608 10318607 10318799 10318608 10318607 10318799 192 AGAAATAAAATAAAAACATACAACCACTACCACCACCACCAACAACAACAACAAaaaaaaaagaagaagaagaagaagaaaaaCTACTGAAAAACATTCCAACTCAACTAAACCAAGAGTATTTCACAATGGAATAAACTAAGACTGCAACAC-ATCATTGAAGAAGTTGAGTCAGCCTAAGCAAAATTTAAC .....x...:x.......--.x.....:..............x.....x.....x:.x:...:x.xx.:x....:x.:x.xx...:.::.x..------...--....xx..x...x..:.--------------.x..:..:..-:......-::...::.x:x:..x.x:x..:..xx.......x.:... 18M2I73M6I3M2I17M14I10M1I7M1D39M 114/167 68.3% 192/94230402 0.0% 26/167 15.6% -8697924 -85532478 +3191 chr4 + 190214555 1620684 1620683 1620745 62 AGAAAGAAAGAAAAAACACCACCACCACCACCACCACCAAAAACAAAAACAATGATGAAAAC chr4 + 94230402 42575013 42575012 42575074 42575013 42575012 42575074 62 AAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGC .:..x.x..:.x....x.xx....................x.....x.....::.x:...:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -40954329 -53276073 +3108 chr4 + 190214555 1620686 1620685 1620735 50 AAAGAAAGAAAAAACACCACCACCACCACCACCACCAAAAACAAAAACAA chr4 + 94230402 42575021 42575020 42575070 42575021 42575020 42575070 50 AAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAA ...x...:.....x.................x..x...x.....x..x.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -40954335 -53276067 +3375 chr4 + 190214555 1620694 1620693 1620768 75 AAAAAACACCACCACCACCACCACCACCAAAAACAAAAACAATGATGAAAACATCAACAGAAATAACATCACTGC chr4 + 94230402 42911778 42911777 42911848 42911778 42911777 42911848 71 AAAAAA----ACCACCACCACCACCACCAACAACAACAACAAAAAACAAAAAACAAACCAAAACACTACCACTAC ......----....................x.....x.....x:.xx....x.:x...x:...:.x:.:....:. 6M4D65M 55/71 77.5% 71/94230402 0.0% 4/71 5.6% -41291084 -52939318 +3020 chr4 + 190214555 1637584 1637583 1637657 74 CCTGCAGTGGGGAAGGCCCCAGGAGAGGGGGAGGGCTGGGGGCAGCCCGGCAGGGGTGGGCAGGGGTGGGCAGG chr4 + 94230402 11910594 11910593 11910667 11910594 11910593 11910667 74 CCTCCTGTGGAAAGCCCCCCAGGAGCTTAGCAGGGGTGGCAGCCACCCAGCTGGAGTGGGGAGGACTGGGCAGG ...x.x....::.:xx.........xxx:.x....x...x:..x:...:..x..:.....x...:x........ 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -10273010 -83957392 +3278 chr4 + 190214555 1648078 1648077 1648151 74 GTGCACCTGTGGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGGATCACCTGGGTCCAGGAGATGGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:..........:::........x:xx.x.:.x...:..:::....:..x.xx:.:...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -74385126 -19845276 +3616 chr4 + 190214555 1649085 1649084 1649210 126 CGTGGGCAACAAG---AGCAAA-----ACAGAAAGGGAAAGGGAAGAGG---AAGGGGAAGGGGAAGGGGAAAGGG-AAGGGGAAAGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGA chr4 + 94230402 6766747 6766746 6766884 6766747 6766746 6766884 138 CATAGGCAAGAAGTGGAGCAAGCAATTACAGGAAGCTACTGGAAAAAAATTAAAGGAAATGAGAAAAAGGAAGGGGCAATGTGAAATGGAAGGGGAAAGGGAACAGCAGGAGTAAGAATCTGGGGAAGAAAAATGGGA .:.:.....x...---.....:-----....:...xx.xx..:..:.::---....::.x.:.:..::....:...-..x.x....x................x:.x.:.:.x...::xxx......::::..x.... 13M3I6M5I22M3I24M1I61M 86/126 68.3% 138/94230402 0.0% 12/126 9.5% -5117662 -89112740 +3616 chr4 + 190214555 1649122 1649121 1649282 161 GAGGAAGGGGAAGGGGAAGGGGAAAGGGAAGGGGAAAGGGAAGGGG-------AAAGGGAAAGGGAAGGGGAA---GGGGAAGGGGAAAG-------------GGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAAAGAGAAAGAAAGAAGGAAACAA--GGGAACAAAGAAA chr4 + 94230402 32265470 32265469 32265655 32265470 32265469 32265655 186 GAGGGTGGTGCTGGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAA ....:x..x.xx..:x......::.x.x.:..:.x.x..::...:.-------:.:.:.x:x.:.::.....:---........:...x.-------------:.:...::...:.::::.:.:.....::....:...:.....x:.x.......x.::xx..x.:x::.--x.:....:..... 46M7I20M3I14M13I68M2I13M 100/161 62.1% 186/94230402 0.0% 25/161 15.5% -30616348 -63614054 +3930 chr4 + 190214555 1649156 1649155 1649242 87 AAAGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAA chr4 + 94230402 73744705 73744704 73744788 73744705 73744704 73744788 84 AAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGG---GGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAA ....x:x.:.xx.....:...:.:.....:........:.:....:..---..:..:...::....x:.:.x.....x......x.. 48M3D36M 61/84 72.6% 84/94230402 0.0% 3/84 3.6% -72095549 -22134853 +3593 chr4 + 190214555 1649169 1649168 1649247 79 AAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAA chr4 + 94230402 73744712 73744711 73744788 73744712 73744711 73744788 77 AAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGG--GGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAA ...xx.....:..::.:.....:..........:....:..--..::......::.:.x:...x...::x.:....x.. 41M2D36M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -72095543 -22134859 +3274 chr4 + 190214555 1649193 1649192 1649262 70 AGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAAAGAGAAAGAAAGAAG chr4 + 94230402 39594986 39594985 39595054 39594986 39594985 39595054 69 AGGCAAAAGGAGAAAAGAAATTCAAGGGGA-GAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAG ...x:.....::..::...:xxx.......-....:.:..:..x:......::.....:.......:... 30M1D39M 50/69 72.5% 69/94230402 0.0% 1/69 1.4% -37945793 -56284609 +3288 chr4 + 190214555 1660147 1660146 1660225 79 GTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCGTGAACCCGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--....:.:...........::........x.xx.x...x.:.x.......:.:..x:xx:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -74373054 -19857348 +3221 chr4 + 190214555 1663069 1663068 1663128 60 TGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGTGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x......:...........::........x.x..x...xx:.x......::.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -74370136 -19860266 +3249 chr4 + 190214555 1666997 1666996 1667070 74 GTGCACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCGGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.:.......::::........x.xx.x...x::........::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -74366207 -19864195 +3097 chr4 + 190214555 1673602 1673601 1673656 55 GCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACC chr4 + 94230402 76033204 76033203 76033258 76033204 76033203 76033258 55 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC .::...x......:.........::::........x.xx.x...x.......... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -74359602 -19870800 +3350 chr4 + 190214555 1674530 1674529 1674611 82 GTGGTGGCACGTGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----.:..:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 6M1D6M4D65M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -74358671 -19871731 +3601 chr4 + 190214555 1687392 1687391 1687475 84 ACGCAGTGGCGGGCGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......:.x:..--....:.:.........:x.:........x.xx.x...x.:...........:..x:xx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -74345804 -19884598 +3378 chr4 + 190214555 1692504 1692503 1692585 82 GTGGTGGCACATACCTGTAATTTCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGACAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----:..x....:..:..........::........x.xx:x...x.:.........:.:..x:xx:..:..... 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% -74340697 -19889705 +3602 chr4 + 190214555 1697704 1697703 1697773 70 CATGGTGGCGCATGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:...:.--....:.............::........x.xx.x...x.:........::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -74335493 -19894909 +3180 chr4 + 190214555 1707227 1707226 1707307 81 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTCAAGA chr4 + 94230402 74452362 74452361 74452442 74452362 74452361 74452442 81 AAAAAAAAAAAAAAAAGCAAACAAACATAAACCAAACAGAATAACAGGGCCACAGTAGGAAAAAAAAAATAAAGTTCATGA ................:x...x...x.x...xx...x.:..x..x.:::xx.x.:x.::..........x.:......x.. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% -72745135 -21485267 +3343 chr4 + 190214555 1710911 1710910 1710993 83 CGCGGTGGCATGCGCCTGTAATCCTAGCTGCTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGGGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:....--...:.x....:.:.:....:..x.::........x.xx.x...x...........:.:..xxxx:.....:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -74322286 -19908116 +3042 chr4 + 190214555 1724352 1724351 1724408 57 CAGATACTTGGATAACTTCATACTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTCTG chr4 + 94230402 50673954 50673953 50674010 50673954 50673953 50674010 57 CAGATACCCGGAGGTCTGGATGTGTCATCTTTTTCTGTTTTTTTTTTTTTTTTTCTG .......::...x:x..xx..::x...::.....:.x.................... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -48949602 -45280800 +3621 chr4 + 190214555 1726990 1726989 1727073 84 ACATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCAGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....:.--...x....:.:...........::........x.xx.x...x.:.........x::..x.xx:..:..:.. 11M2D71M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -74306206 -19924196 +3336 chr4 + 190214555 1733843 1733842 1733920 78 TGGCACATGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCGGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..:.--....:.:.:.........::........x.xx.x...x.:...........:..x:xx:..:..:.. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% -74299359 -19931043 +3530 chr4 + 190214555 1743413 1743412 1743495 83 CATGGTGGCACGCACCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........x:........x.xx.x...x.:......:..:.:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -74289784 -19940618 +4327 chr4 + 190214555 1749152 1749151 1749390 239 TCCCCACCTGTTCC---------------CTCCCCCTGCCCCCTCCCCACCACGAACCCTCCCCACCTGTCCCCTCCTCACCTGTCCCCTCCCCACCTCCCCCCTCCCCACTGCGCCCCCTCCCCAATGCACCCCCTCCCCAACACGCCCC---------CTCCCCACTGCCCCCC-------CTCCCCAAGGCACCCCCTCC--------CCAACACGCCCC-------CTCCCCACTGTGCCCCCTCCCCACC-----ATGCCCCCTCCCCATCTGCCCCCTCCTCAC chr4 + 94230402 44820384 44820383 44820668 44820384 44820383 44820668 285 tccccattttttcctctttgtttttccttcttttctttttttctttcttCCACGG---CCCCCCATCCATCCCCTCCTCCTCTGCCCCCCCCCCACCCCTTTTTTCCCAG--GCGCCGTTAGCCCAGAGCTCCCCCCTCCCACTGCTCCTCCAGACGACGCCGCTCGCCGCATCCCAGGGCTGTCCCCGCGGGCAGCCCCTGCGGCGGGGGCAGCCGTGCCCCGCGGGAGCTCCTGACCCCGTACCTGCGCTACAGCGCGACGCCCCCCCCCCAACCCCCCACCCCCCAC ......::.x....---------------..:::.:.x::::..::.:x.....:---.:.....:.::..........x:...:....:.......:.:::::....x:--.....x::xx....:x..x.....::....x::.x..:.---------.:x.:.:.:..x:...-------::...xx:....x.....x.--------.x:x.::.....-------....:x..:x:.:x..:x.x.:..x-----.:......:.....x.:x...x.:..:... 14M15I26M3D52M2D39M9I16M7I20M8I12M7I25M5I30M 147/234 62.8% 285/94230402 0.0% 56/234 23.9% -43071232 -51159170 +5605 chr4 + 190214555 1806030 1806029 1806347 318 TGCCTCCCACCCCTTCCCCA--GTGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGATGAAGATCGCAGACTTCGGGCTGGCCCGGGACGTGCACA---ACCTCGACTAC-TACAAGAAGACGACCAACGTGAGCCCGGCCCTGGGGTGCGGGGGTGGGG--GTCATGCCAGTAGGAC----GCCTGGCGCCAACACCGCCT----------------TCCCACACCCTCCCAGGGCCGGCTGCCCGTGAAGTGGATGGCGCCTGAGGCCTTGTTTGACCGAGTCTACACTCACCAGAGTGACGTGTACGTGTCCTGCAGAGCTC chr4 + 94230402 12115090 12115089 12115431 12115090 12115089 12115431 342 TGCCTCTCTTCATTCCCTCACAGTGCATCCATCGGGATTTGGCAGCAAGGAACATCCTTCTTTCTGAGAACAACGTGGTGAAGATCTGTGACTTTGGGCTAGCCAGGGACATTTACAAAGACCCCGACTATGTACGGAAAGGAGATGTAAGTG-GAAAAAACCTAAAATGCTAATCTCAGGCCTTTATTCTTCTAGGACTTGAGCAGATTGTTAACAACAGTTCTGGCAATGTGTTATGTCTTCTGCGTTCTTAGGCAAGACTTCCACTCAAATGGATGGCTCCAGAAGCAATTTTTGATAAGATCTACACAACACAGAGTGATGTCTG---GTCTTTTGGAGTTC ......:.x:.x:.:..:..--.........:x....::....x..xx.x..::.x..xx.xx.:...:........:........xxx.....:.....:...x.....:.x:...---...:......:-...:::...:x..:xx.x...-.xxx::x...::::...x::xx.x:..--x.:..x.:xx......----..xx:x:.::....x.:x:.----------------..::x::.x:..::...xxx.:..x..xx.x..:........x..x..:..xx.x.....:x:::.......xxxx........:..x.:---...:.x::...:.. 20M2I95M3I11M1I21M1D27M2I16M4I20M16I90M3D14M 194/314 61.8% 342/94230402 0.0% 32/314 10.2% -10309060 -83921342 +5430 chr4 + 190214555 1806048 1806047 1806347 300 CAGTGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGATGAAGATCGCAGACTTCGGGCTGGCCCGGGACGTGCACA---ACCTCGACTACTACAAGAAGACGACCAACGTGAG--CCCGGCCCT----------GGG-----GTGCGGGGGTGGGGGTCATGCCAGTA---GGACGCCTGGCGCCAACACCGCCTTCCCAC------------------------------------ACCCTCCCAGGGCCGGCTGCCCGTGAAGTGGATGGCGCCTGAGGCCTTGTTTGACCGAGTCTACACTCACCAGAGTGACGTGTACGTGTCCTGCAGAGCTC chr4 + 94230402 67076890 67076889 67077238 67076890 67076889 67077238 349 CAGTGCATCCACAGGGACCTGGCTGCTCGTAATATCCTCTTGTCAGACAATAACGTGGTCAAAATCTGTGATTTTGGCTTGGCTCGAGACATCTACAAAGACCCAGATTACGTCAGGAAAGGA---GATGTAAGTTTCAGACTCTCTATTTGAAAGAGAGTTAATGTGAAGTCAGAACTCAAACCCTTAAATGGGTGTTTGG----AAAATCAGTCTTTTACTGAGCTGTGATGtatatatatatatatttaaattaaatGTTTTCAGGCTAGGCTACCGCTAAAATGGATGGCACCAGAAACCATTTTTGATAGAGTATATACCATTCAGAGTGATGTGTG---GTCATTTGGAGTTC ..........................:..:...:.x..xx..x.x..x:.:......:.x..:...xxx..:..:..x:....:..:...:.x:...---...:x..:...xx..:...::x:---:.:..:..--:.x.:.:..----------.:.-----:..:.::.x::.::x...x:..xx..---..::.::...----..x.:.:x::.:::..------------------------------------.:x:.::....x:x....:..xx.:..:........:..x..::..x.x.....:x....x..:..:xx:........:....:---...x.x::...:.. 97M3I23M3D8M2I9M10I3M5I26M3I10M4D16M36I84M3D14M 185/290 63.8% 349/94230402 0.0% 69/290 23.8% -65270842 -28959560 +3502 chr4 + 190214555 1806827 1806826 1806905 79 AGGTACATGATCATGCGGGAGTGCTGGCATGCCGCGCCCTCCCAGAGGCCCACCTTCAAGCAGCTGGTGGAGGACCTGG chr4 + 94230402 12120871 12120870 12120949 12120871 12120870 12120949 79 AGATACCAGACAATGCTGGACTGCTGGCATGGAGTGCCCACAGAGAGGCCCACCTTCACTGAGCTTGTAGAGCGCTTAG ..:...xx..:x....x...x..........xx.:....x.xx...............xxx....x..:...x:.:.:. 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -10314044 -83916358 +3109 chr4 + 190214555 1807384 1807383 1807455 72 TGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCACATCCGCGTGTGCCTGTGTGCGTGCGCATCTTGC chr4 + 94230402 3414931 3414930 3415002 3414931 3414930 3415002 72 TGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGAGCTCGCCTGGC ..x.....:x.:....:.::.....x...:..........x.:.......:x::.:::x.x..x.::..x.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -1607547 -92622855 +3239 chr4 + 190214555 1824190 1824189 1824261 72 GTGCACCTGTAGTCCCAGCTACTTGGGTGGCTGAGGCACAAGAATTGCTTGAACCAGGGAGGCGGAGGTTGT chr4 + 94230402 76033204 76033203 76033275 76033204 76033203 76033275 72 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ......x......:...........::x.......x.x::x...x::........x:.:..x:xx:..:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -74209014 -20021388 +3727 chr4 + 190214555 1835308 1835307 1835381 74 GCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCGCTTGAACCCAGGAGGTGGAGGCTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...x....:.:...........::........x.x::x...x.:...........:..x.xx:....::.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -74197896 -20032506 +3343 chr4 + 190214555 1844592 1844591 1844673 82 GTGGTGGCACACACCTGTAATCTCAGTTACTTGGAGGGCTGAGGCGTGAGAACTGCTTGAAGCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.::...:......:.:.......x.x..x...x::......x..:.:..x.xx:.....:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% -74188609 -20041793 +3058 chr4 + 190214555 1848419 1848418 1848477 59 GCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGGATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x..................::........x.xx.x.:.xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -74184787 -20045615 +3391 chr4 + 190214555 1854349 1854348 1854422 74 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........::::........x.xx.x...x.:........::....x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -74178855 -20051547 +3079 chr4 + 190214555 1854769 1854768 1854829 61 AGCAACAGA----TTGAGACTCTGTCT---TTAAAAACAAACAAACAAACAAACAAAAAAAAACAAGA chr4 + 94230402 24270294 24270293 24270361 24270294 24270293 24270361 68 AGCAATAGAAATACAAAGACTCTAGTTCATTAAAAAACAAACAAACAAACAAAAAGAAAAAAACAAGA .....:...----:x:.......:x:.---.x.....................x.:............ 9M4I14M3I38M 51/61 83.6% 68/94230402 0.0% 7/61 11.5% -22415525 -71814877 +3196 chr4 + 190214555 1859998 1859997 1860080 83 CGTGGTGGCACATGCCGGTAATCCCAGCTGCTTGACAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGATGGACGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.:--...:.:......:.....x........x.xx.x...x...........x.:..x.xx:x.:..:.. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -74173199 -20057203 +3233 chr4 + 190214555 1860576 1860575 1860683 108 TCAATGGAACC-------CACTATATATATGTGTATGTGTGTATATATATGTGTGTGTATATATATATGTATATATATGTATATGTATATATATGTGTGTATATATATATATATA chr4 + 94230402 40388166 40388165 40388280 40388166 40388165 40388280 115 TCAATTGAACTTGTTGGTCACCATGTAGCGCTGGATTTCTCTCTTTAGTTTTGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA .....x....:-------...:..:..xxxx..x..x.x.x.x.x..xx.x.........:.:.x...x..:..:....:......::...:.x:......xx.:.:..xx.... 11M7I97M 73/108 67.6% 115/94230402 0.0% 7/108 6.5% -38527590 -55702812 +3001 chr4 + 190214555 1860588 1860587 1860648 61 ACTATATATATGTGTATGTGTGTATATATATGTGTGTGTATATATATATGTATATATATGT chr4 + 94230402 21429693 21429692 21429753 21429693 21429692 21429753 61 ATCATATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACAAGT .::.....x.:..x.x.x.xx..x.........................:.:..x.:.x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -19569105 -74661297 +3736 chr4 + 190214555 1860590 1860589 1860693 104 TATATATATGTGTATGTGT----GTATATATATGTGTGTGTATATATATATGTATATATATGTATATGTATATATATGTGTGTATATATATATATATATATATATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:.....x.x...----....x.......::x:::.....:x::....:x....:....:.::x:..::x.x.........:.:...:x....::..::.:. 19M4I85M 68/104 65.4% 108/94230402 0.0% 4/104 3.8% -19248604 -74981798 +3221 chr4 + 190214555 1860591 1860590 1860661 71 ATATATATGTGTATGTGTGTATATATATGTGTGTGTATATATATATGTATATATATGTATATGTATATATA chr4 + 94230402 85834538 85834537 85834608 85834538 85834537 85834608 71 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..x.:.:.x...:.......:.:.:...xx:...:x::...:.......x...:....x....:.:.:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -83973947 -10256455 +3144 chr4 + 190214555 1860601 1860600 1860650 50 GTATGTGTGTATATATATGTGTGTGTATATATATATGTATATATATGTAT chr4 + 94230402 86633941 86633940 86633990 86633941 86633940 86633990 50 GTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ....:...x.:....:...:...........:..x.....::..x..... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -84773340 -9457062 +3673 chr4 + 190214555 1860604 1860603 1860707 104 TGTGTGTATATATATGTGTGTGTATATATATATGTATATATATGTATATGTATATATATGTGTGTATATATATATATATATATATATATATATATTTTTTTTTT chr4 + 94230402 79265520 79265519 79265620 79265520 79265519 79265620 101 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---ACACCTCTATATAAATGCACTTTGCCTTTTT .......:.:.::.........xx.:......::..:.::.:..:.:.:.:.x.:....x.....x:.:.---.:.:x.x......x..::.:x..x::..... 70M3D31M 66/101 65.3% 101/94230402 0.0% 3/101 3.0% -77404916 -16825486 +3021 chr4 + 190214555 1860661 1860660 1860710 50 ATGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTAGA chr4 + 94230402 82013246 82013245 82013295 82013246 82013245 82013295 50 ATTTGTATATGTATGCATATATGCATGTATACATATATCTCCTTTTTAGA ..x...:...:...::......::..:....:......:.::........ 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -80152585 -14077817 +3017 chr4 + 190214555 1878231 1878230 1878269 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -22914395 -71316007 +3039 chr4 + 190214555 1890282 1890281 1890314 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT chr4 + 94230402 72938557 72938556 72938589 72938557 72938556 72938589 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -71048275 -23182127 +3178 chr4 + 190214555 1893512 1893511 1893593 82 AAGATGTATTTTGCCTCTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTGTTTTGTTTTGAGACAAGGTCTTGCTCTGTACCC chr4 + 94230402 64908788 64908787 64908856 64908788 64908787 64908856 69 AAGATGTATCTCA---------GTGTTTTTTGTTTTTTTTTTTTGTTTGTTTTGTTTTAAATTA----TTTGCTCTTTCTCC .........:.::---------x.....................x.............:.:x:.----:.......x.x:.. 13M9D42M4D14M 56/69 81.2% 69/94230402 0.0% 13/69 18.8% -63015276 -31215126 +3213 chr4 + 190214555 1893529 1893528 1893578 50 TTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTGTTTTGTTTTGAGACAAGG chr4 + 94230402 33814298 33814297 33814347 33814298 33814297 33814347 50 TTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGGAACAGGG .......x....xx.........x...x..............::...:.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -31920769 -62309633 +3241 chr4 + 190214555 1896735 1896734 1896872 138 TCTCTCTTTCTCTTTCTTTCTTTCCTTCTTTCTTCTCTTTTTTTTCTTTTCTTTTCTTTCTTTCTCTCTCATTCTTTCTTTCTTTCTTTTCCTTTCTTCTCTTCTCTTTTCTTTTCTTTCTCCTTGCCTTCCCCAACA chr4 + 94230402 68974683 68974682 68974816 68974683 68974682 68974816 134 TCTACTCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCATCTGTTCTAATTTTTGCAGCTTCT-TTTGC---CCCCAACA ...x:::..:...x.::...xx...:.:...:..:.:........x.x:::.::...x.::xx:.:...:..x:x....x::..:.:.x..:.::.x...x....xx...:.x:xx:....-:....---........ 121M1D5M3D8M 81/134 60.4% 134/94230402 0.0% 4/134 3.0% -67077948 -27152454 +3032 chr4 + 190214555 1896736 1896735 1896847 112 CTCTCTTTCTCTTTCTTTCTTTCCTTCTTTCTTCTCTTTTTTTTCTTTTCTTTTCTTTCTTTCTCTCTCATTCTTTCTTTCTTTCTTTTCCTTTCTTCTCTTCTCTTTTCTT chr4 + 94230402 65413482 65413481 65413593 65413482 65413481 65413593 112 CTCTGCTTTGATTTCTTTCTTTCATGGCTTCATAACAGCTCCATGTGTTCTTTTCTTTCTTTTTATCTCTGTCAGCTTTTCATTCTTTTTTTCCTACCATTTATCTAGCCTT ....x:..:xx............x.xx:...x.xx.xx:.::x.x.x...............:.x....xx..xx::....x.......::.:::x:.x:..x...xx:... 112M 70/112 62.5% 112/94230402 0.0% 0/112 0.0% -63516746 -30713656 +3181 chr4 + 190214555 1897353 1897352 1897414 62 GGTGCACCTATAGTCCCAGCTACTCGGGAGGCTGAGATGGGAGGATTGCTTGAGCCCTGAAG chr4 + 94230402 76033203 76033202 76033264 76033203 76033202 76033264 62 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......x.:....:.........:.::........x:xx.x.:.x::.....:...x.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -74135850 -20094552 +3191 chr4 + 190214555 1906626 1906625 1906672 47 ACTGCCATTTTTACTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 17384398 17384397 17384444 17384398 17384397 17384444 47 ACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ....x.....x.xxx...............:................ 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% -15477772 -78752630 +3017 chr4 + 190214555 1906632 1906631 1906673 42 ATTTTTACTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 6554015 6554014 6554056 6554015 6554014 6554056 42 ATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ....x.xx................:.:............... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -4647383 -89583019 +3044 chr4 + 190214555 1906635 1906634 1906687 53 TTTACTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACACAG chr4 + 94230402 17384405 17384404 17384457 17384405 17384404 17384457 53 TTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAGAAGAAACGG ....:.xx.............:.:................x.xx:...x..:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -15477770 -78752632 +3094 chr4 + 190214555 1915065 1915064 1915145 81 ATTTCTTATCTTCCAAGCTTTCTTGTTGAATTTTTTCTTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 + 94230402 72471344 72471343 72471424 72471344 72471343 72471424 81 ATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCT ....:..x....x..:::......x.x.:x..:..x:..x.:...::::.....:....:........:xx.:.x.x:... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -70556279 -23674123 +3474 chr4 + 190214555 1920310 1920309 1920475 166 CATGGTGGTGTGCGCTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCGGGAGGCCACAGTGAGCTG-AAATCATGCCGCTGCACTCCAGCCTGGGTAATCCTTAGGGCTTTTCTCAG------GAATGCAAGGGTGATTTGATGTTAGAAAGCTAT chr4 + 94230402 76033197 76033196 76033356 76033197 76033196 76033356 160 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT---TTGGGCTGTAGAACATGATGC------CAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAG--AGCTTGGGGTCACAAGGCTGT ..::......::..--....:.:.........::::........x.xx.x...x..........x:..:..:---x..:....-.:.x....x:..------.x...xx:x..:xx..:..:.x..x:..:...------..x....::.--:::...:x..:.x..:...:. 14M2D56M3D8M1I12M6D32M6I10M2D21M 102/153 66.7% 160/94230402 0.0% 20/153 13.1% -74112887 -20117515 +3325 chr4 + 190214555 1925743 1925742 1925822 80 TGTACTTCTTTTTATATATCTATATATAT----------------ATTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTGAG chr4 + 94230402 68489629 68489628 68489724 68489629 68489628 68489724 96 tatatatttttttatatttttaCCTCTATTAAATACTTGTTTTGACTTTTTTTTTTTTTGGTTCTTTGTTTGTTTGGCTTTGCTTTTGGTTTTTAG .:..:x.:.........x.:..:x.x...----------------x.........x....x..x............x:....:.....x....x.. 29M16I51M 62/80 77.5% 96/94230402 0.0% 16/80 20.0% -66563886 -27666516 +3213 chr4 + 190214555 1925773 1925772 1925826 54 TTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTGAGACAG chr4 + 94230402 25576013 25576012 25576066 25576013 25576012 25576066 54 TTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAAACAG ....xx..............x...x....xx..........x.....x.:.... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% -23650240 -70580162 +3089 chr4 + 190214555 1927688 1927687 1927755 68 CAGCCTGGGCCACAATGAGACTCTTATCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCGTG chr4 + 94230402 74179727 74179726 74179794 74179727 74179726 74179794 68 CAGGATGGTCCACAATTGTACTCCTTTTACAGGAAGAAAAAAAAAAAAAACAGAAGCAGAAAATCATG ...xx...x.......x:x....:.x.:x...:..:..............x.:..:x.:...::.:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -72252039 -21978363 +3227 chr4 + 190214555 1932606 1932605 1932675 70 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....::..:.--....:.:...........::........x.xx.x...x.:........::.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -74100591 -20129811 +3084 chr4 + 190214555 1934834 1934833 1934908 75 CGAGACTCCATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT chr4 + 94230402 47557082 47557081 47557156 47557082 47557081 47557156 75 CAAAGCTTTATTTTTAAACAAAAAAGAAAAAAAAAGAAAAAGAAAGTATGTCCATCTTTATGAGTGTTTTCACAT .:.::..::..:..x...x......:.........:.....:...:...:.x:..x.x...:x:.:.x.x:.:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -45622248 -48608154 +3126 chr4 + 190214555 1934846 1934845 1934907 62 TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.:::...x.:.........x.:......x.x......:.:..:...:.....x....::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 439852 NA +3121 chr4 + 190214555 1934854 1934853 1934907 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -88095222 -6135180 +3433 chr4 + 190214555 1934854 1934853 1934912 59 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAAA chr4 + 94230402 1495000 1494999 1495058 1495000 1494999 1495058 59 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGA ...x.:.........x.:......x........:.:..:...:.....x....::..:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 439854 NA +3564 chr4 + 190214555 1934856 1934855 1934914 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAAAAA chr4 + 94230402 1495000 1494999 1495058 1495000 1494999 1495058 59 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGA ...x.:.........x.:...............:.:..:...:.....x....:x..:. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 439856 NA +3202 chr4 + 190214555 1934858 1934857 1934919 62 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAAAAACAGAT chr4 + 94230402 1495000 1494999 1495061 1495000 1494999 1495061 62 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGT ...x.:.........x.:....x..........:.:..:...:.....x...x:x..x..:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 439858 NA +3178 chr4 + 190214555 1935730 1935729 1935818 89 GTGCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGACAGGCAGAGGTTGCTGTGAGCTG-AGATCATG chr4 + 94230402 76033204 76033203 76033283 76033204 76033203 76033283 80 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC-------CAGAA---GCTTTGGGCTGTAGAACATG ......x....:.:.........::.:........x.xx.x...x::........-------....:---...x..:....-...x.... 55M7D5M3D11M1I8M 62/79 78.5% 80/94230402 0.0% 11/79 13.9% -74097474 -20132928 +3194 chr4 + 190214555 1938337 1938336 1938426 90 GAGATTTTTTTTCCTTTCTTTTCCTTTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTT chr4 + 94230402 14829154 14829153 14829243 14829154 14829153 14829243 90 GAAGTATTCTTTCTTCTCTGTCTGTGTGGTACTTTTTTTTTTTTTTTTTCCTTTTTACTCCTTCCAGTTCCTCTTCTACTTTATTTATTT ..::.x..:....:.:...x.::x.x.x..xx..:.....:........:.:....x:..:..:.xx..::.:....x::..x...x... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -12890817 -81339585 +3005 chr4 + 190214555 1938340 1938339 1938422 83 ATTTTTTTTCCTTTCTTTTCCTTTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTT chr4 + 94230402 26457979 26457978 26458061 26457979 26457978 26458061 83 ATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATTCTCCTGCCCTGTTTCTCATTTCCTCTTTCATTCACCCTTTTCT ...:.....:.:...xx........x:.x:::x:...x..:.::.x:...x...:..x....:.:...:x...x::.....:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -24519639 -69710763 +3172 chr4 + 190214555 1938344 1938343 1938427 84 TTTTTCCTTTCTTTTCCTTTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTT chr4 + 94230402 14829160 14829159 14829243 14829160 14829159 14829243 84 TTCTTTCTTCTCTGTCTGTGTGGTACTTTTTTTTTTTTTTTTTCCTTTTTACTCCTTCCAGTTCCTCTTCTACTTTATTTATTT ..:..:...:::.x..:x.x..x.::.:.....:................x::::...:xx..::.:.::.x....x...x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -12890816 -81339586 +3029 chr4 + 190214555 1938351 1938350 1938446 96 TTTCTTTTCCTTTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTT--TTTTTTTTTTTTTTTTTTAAATA chr4 + 94230402 72471342 72471341 72471439 72471342 72471341 72471439 98 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATA ..x:....:..:..::x.x.:..:....xxx...:.:x...x.:.:::.:......:........:....:..--:.x:x.:.....x.:x...x... 73M2I23M 62/96 64.6% 98/94230402 0.0% 2/96 2.1% -70532991 -23697411 +3095 chr4 + 190214555 1938370 1938369 1938448 79 TCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAATAAT chr4 + 94230402 58577649 58577648 58577727 58577649 58577648 58577727 79 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTTACAAAAGAT .......:...::::x..x.x....:x...x...::x.x:..:...:.::..........x...x.....x:...x:.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -56639279 -37591123 +3132 chr4 + 190214555 1938374 1938373 1938486 113 TTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAATAATAGAGAGACACAATCACTGACA--AAACGGCCAGAACAAGC chr4 + 94230402 51335326 51335325 51335433 51335326 51335325 51335433 108 TTTCCTGGTTTCTCACAGTTCTCATT-CTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAAAAAAAAAAAAG------TCCTTGAAAATAAACTGGTAGGACAAAC ....:.xx...:..x:xx..:..x..-..:.:...x..:.............::..:...::.:...:...x..x.:.:..------..x:...x.--....x.x:..:....:. 26M1D54M6D9M2I17M 73/106 68.9% 108/94230402 0.0% 9/106 8.5% -49396952 -44833450 +3012 chr4 + 190214555 1938380 1938379 1938437 58 TTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 86518997 86518996 86519054 86518997 86518996 86519054 58 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ...:..:...:::.:....x.:.:xx..........:.......:.....:.x:.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -84580617 -9649785 +3383 chr4 + 190214555 1977646 1977645 1977718 73 TGCACCTGTAATCCCAGCTATTCGGGAGGCTGAGGCAGGAGAAATGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.......:.:.::........x.xx.x...:::.........:.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -74055559 -20174843 +3395 chr4 + 190214555 1993439 1993438 1993508 70 CGTGGTAGCGCATTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::..:.:...--.x....:.:...........::........x.xx.x...x.:...........:.. 12M2D56M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -74039758 -20190644 +3270 chr4 + 190214555 1994715 1994714 1994824 110 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAG----TGA-GCCGAG--ATTGCGTGCCCC-AGCCTG chr4 + 94230402 76033197 76033196 76033312 76033197 76033196 76033312 116 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG .:::......--...x......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:..----...-...:..--:x..:......:-...... 10M2D71M4I3M1I6M2I12M1I6M 79/108 73.1% 116/94230402 0.0% 10/108 9.3% -74038482 -20191920 +3039 chr4 + 190214555 1998053 1998052 1998130 78 GACTACGGCAAGGAAAACAAACGAGCAGAAAACGACAACAGCATCAACAACAACAACAACAACCACAACAAAAGCCCC chr4 + 94230402 42575000 42574999 42575077 42575000 42574999 42575077 78 GACTAATGACATGAAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCC .....xx.xx.x.....::x.x:.xx.:....x:x..x..x..:..x..x.............x....x......... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -40576947 -53653455 +3008 chr4 + 190214555 2011372 2011371 2011413 42 AAAAAAAAAAAAAAAAAAGCAATTCGTAGGAGAAACCCAAAT chr4 + 94230402 76584300 76584299 76584341 76584300 76584299 76584341 42 AAAAAAAAAAAAAAAAAAGCAATTCTTAATAGAAACATAAAT .........................x..:x......x:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -74572928 -19657474 +3504 chr4 + 190214555 2012375 2012374 2012440 66 GTGGTGCGCCTGTAGTCCCAGCTACTTAGGAGGTTGAGGTGGGAGGATCACTTGAGCTCAGGAGTT chr4 + 94230402 76033201 76033200 76033266 76033201 76033200 76033266 66 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .......:.x......:..........:::...:....x:xx.x.:.x.......:.:...:..:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -74020826 -20209576 +3340 chr4 + 190214555 2013205 2013204 2013276 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCGGGAGGCGAAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -74020001 -20210401 +3783 chr4 + 190214555 2020197 2020196 2020293 97 CTTCCTTCCTTCCTTCCTCCTTCCCTCTCTCCCTCCCTCCCTACCTCCCTCCCTTCCTTCCTTCCTACCCTCTTCTTTTTCTTTTTCTTTCTCCTTC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCC---CCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ...:x:.::....:::......:.....:...........x:...:x::...---....x....::xx...:....:x.....x.:x.::..:..:. 52M3D42M 63/94 67.0% 94/94230402 0.0% 3/94 3.2% -51744338 -42486064 +3756 chr4 + 190214555 2020263 2020262 2020379 117 ACCCTCTTCTTTTTCTTTT---TCTTTCTCCTTCCTTTCTTCTTTCTTTTTCTTTCTTTCTTTTCTTTCTTCTTTCCTTCCTTCCTCCCTCCCTCTCCCTTTCTTCCTTTCTTCCCTCTT chr4 + 94230402 63697116 63697115 63697235 63697116 63697115 63697235 120 ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..::.x...:.:.:....:---.x...:::...::....:..x.....:.x:..:xx.::..x....xxx:....x...::.:x.xx:..::.......:.::..:.........:.:.. 19M3I98M 73/117 62.4% 120/94230402 0.0% 3/117 2.6% -61676853 -32553549 +3029 chr4 + 190214555 2020274 2020273 2020327 54 TTTCTTTTTCTTTCTCCTTCCTTTCTTCTTTCTTTTTCTTTCTTTCTTTTCTTT chr4 + 94230402 59557954 59557953 59558007 59557954 59557953 59558007 54 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT .....:x..:::..:...:.....:..:........:.x..:........:x.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -57537680 -36692722 +3570 chr4 + 190214555 2020279 2020278 2020403 125 TTTTCTTTCTCCTTCCTTTCTTCTTTCTTTTTCTTTCTTTCTTTTCTTTCTTCTTTCCTTCCTTCCTCC--------CTCCCTCTCCCTTTCTTCCTTTCTTCCCTCTTTCTCTT-TATATCTTTCTTTCTCCT chr4 + 94230402 82976642 82976641 82976775 82976642 82976641 82976775 134 TTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCATATTAAATCACCTTCTCACCCCT ....x........x.:....:x::.x......x.x.xx:...:x...:..:...:.....:.:.::.:.--------::....:.x::x.........:x..:.:....:x.x..-x..xx.:....:x.:... 69M8I38M1I18M 81/125 64.8% 134/94230402 0.0% 9/125 7.2% -80956363 -13274039 +3166 chr4 + 190214555 2020299 2020298 2020352 54 TTCTTTCTTTTTCTTTCTTTCTTTTCTTTCTTCTTTCCTTCCTTCCTCCCTCCC chr4 + 94230402 38772185 38772184 38772238 38772185 38772184 38772238 54 TTCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCCC ......:...:...x.....:....::::..:..:.::.:..x........... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -36751886 -57478516 +3095 chr4 + 190214555 2020739 2020738 2020878 140 TTCTTTCTTTCCCTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTTCTTTTTCTTTCC chr4 + 94230402 52146249 52146248 52146387 52146249 52146248 52146387 139 TTCTCTCTT-CCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTCTTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTCTTCTCCACTTCTACTCCC ....:....-.....:..:....:.....:xx:x.:.xx....:x::x.....::x.:xx...:.x.x:....:.:..:x:x.x::x.x.x.x.....::.xxx:.:......::....:....:.::x:..:.x:.:.. 9M1D130M 80/139 57.6% 139/94230402 0.0% 1/139 0.7% -50125510 -44104892 +3918 chr4 + 190214555 2020745 2020744 2020900 156 CTTTCCCTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTTCTTTTTCTTTCCATA-ATTTCTCTTTCTCCTTCCT chr4 + 94230402 19215407 19215406 19215564 19215407 19215406 19215564 158 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCT .:::.....:::.::::.....:....:...xx....xx.xx......x..::...x......xxx....x.x..-..:xx...::...:x..::..:.x:.x.:....xxxx:....:..xx......::.x..x..-....:...x..::..x:.. 75M1I62M1I19M 97/156 62.2% 158/94230402 0.0% 2/156 1.3% -17194662 -77035740 +3070 chr4 + 190214555 2020749 2020748 2020908 160 CCCTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTTCTTTTTCTTTCCATAATTTCTCTTTCTCCTTCCTTCCTTCCT chr4 + 94230402 19215407 19215406 19215566 19215407 19215406 19215566 160 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...:.::..::::.:::::....:...:...xx...:xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x..:.:.xxxx:..:....xx::...::x.:x:..x.x...:..:x....::x.::.. 160M 86/160 53.8% 160/94230402 0.0% 0/160 0.0% -17194658 -77035744 +3552 chr4 + 190214555 2020751 2020750 2020834 84 CTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...........x..::.x:::..:....::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -55351275 -38879127 +3475 chr4 + 190214555 2020757 2020756 2020859 103 CTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--------TTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTCTTT chr4 + 94230402 37898160 37898159 37898271 37898160 37898159 37898271 112 CTTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTT ..........::...x.....x......x...x.:..:.x:...xx....x.::..x.--------..x.......xx.x.......-..x:.x.:.....:.x.:..x... 58M8I21M1I24M 75/103 72.8% 112/94230402 0.0% 9/103 8.7% -35877403 -58352999 +3046 chr4 + 190214555 2020767 2020766 2020850 84 CTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .....::..:.:.:x.:...x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -55351259 -38879143 +3652 chr4 + 190214555 2020772 2020771 2020880 109 CTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-------TCTTTCTTCTTTCTTTTTTCTTTTTCTTTCCAT chr4 + 94230402 63697117 63697116 63697237 63697117 63697116 63697237 121 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTAT ....x..:..:.......:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-------.:.:...:.::......:.:.:..:....::.. 65M5I11M7I33M 73/109 67.0% 121/94230402 0.0% 12/109 11.0% -61676345 -32554057 +3078 chr4 + 190214555 2020786 2020785 2021034 249 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTTCTTTTTCTTTCCATAATTTCTCTTTCTCCTTCCTTCCT-TCCTTCCTTTATTTATTTTTCTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGT--GGCATGATCTCAGCTCATTACATCCTCCGCCTCCCAGGTTCAAGCGATTCTCTGTC------TCAGCCTCCCT chr4 + 94230402 67728277 67728276 67728515 67728277 67728276 67728515 239 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCAT-----------CCTCTCCATCACCCACGT--GGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCC------TAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTT .....x:..x....:....xx:.::..:x.......x.x...x:x::::..:...:.::.:.x.x::.....:x:x...:..::.x:.:x..::.x.:.x...:.x..x...:.::.x.-.:..x..::x:..:x..::..x.-----------:.x...::.......x.:--.::.x....--xx.x.x:x...xx:.:x..x.....x..x.....------:..:.x:...::..x.------.....:...:. 119M1I23M11D18M2D9M2I34M6D16M6I11M 135/230 58.7% 239/94230402 0.0% 28/230 12.2% -65707491 -28522911 +3103 chr4 + 190214555 2020842 2020841 2020906 65 TTTCTTTCTTTCTTCTTTCTTTTTTCTTTTTCTTTCCATAATTTCTCTTTCTCCTTCCTTCCTTC chr4 + 94230402 78634654 78634653 78634718 78634654 78634653 78634718 65 TCTCTTCCTTTCTTCTTTGCTTTTTGTTTTTCTTCACATAACTTTTGCAGTTTCTTACTTCTGTC .:....:...........x:.....x........:x.....:..:.x:xx:.:...x....:x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -76613812 -17616590 +3304 chr4 + 190214555 2030821 2030820 2030881 61 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGTCCGGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....x......:.........:.::........x.xx.x...x::.....::..:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -74002383 -20228019 +3282 chr4 + 190214555 2030950 2030949 2031001 52 TCAAAAACAAAAAACAAACAAACAAAAAAAACACACAAAAAAACAAAAAACT chr4 + 94230402 66953671 66953670 66953722 66953671 66953670 66953722 52 TTAAGAGCAAAAAACAAACAAACAAAAAAAAAAAGCAAAAAAACCCCAAACT .:..:.:........................x.x:.........xxx..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -64922721 -29307681 +3262 chr4 + 190214555 2030954 2030953 2031002 49 AAACAAAAAACAAACAAACAAAAAAAACACACAAAAAAACAAAAAACTG chr4 + 94230402 22790719 22790718 22790767 22790719 22790718 22790767 49 AAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAGCCTG ...x...x..x.................x.......:.......:x... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% -20759765 -73470637 +3288 chr4 + 190214555 2038221 2038220 2038302 82 ATTAAGTGA------TCAGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAAATTAAAATTTTTTTT chr4 + 94230402 65285559 65285558 65285646 65285559 65285558 65285646 88 ATTAGGTGAAATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCT ....:....------...:...xx.xx...x..:.......:....x.........x.:.:.:.x....x..x:...xx.......:. 9M6I73M 61/82 74.4% 88/94230402 0.0% 6/82 7.3% -63247338 -30983064 +3200 chr4 + 190214555 2038232 2038231 2038307 76 AGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAAATTAAAAT--TTTTTTTCTGGA chr4 + 94230402 82338442 82338441 82338519 82338442 82338441 82338519 78 AGTGTGTATATATGCACACATATCTAGATAGACATGTATATTTAATCACATACGAAATCAAATTGACTCTCTTTTGGA .............::.:.:....x..x...x.:..:.....x..xx:.:...::....:...x.--:.:.:..:.... 64M2I12M 54/76 71.1% 78/94230402 0.0% 2/76 2.6% -80300210 -13930192 +3051 chr4 + 190214555 2038244 2038243 2038304 61 TATATATATATATATATATATATATATATATATATATATATAAAATTAAAATTTTTTTTCT chr4 + 94230402 65285586 65285585 65285646 65285586 65285585 65285646 61 TATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCT ...x..:.......:....x.........x.:.:.:.x........xxx.x.x........ 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -63247342 -30983060 +3706 chr4 + 190214555 2039285 2039284 2039356 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -73993921 -20236481 +3652 chr4 + 190214555 2039711 2039710 2039782 72 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGGTGGAGGTCGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.xx.x...x...........:.:..x.xx:..::.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -73993495 -20236907 +3302 chr4 + 190214555 2098282 2098281 2098361 80 GATGATA--------TGCCCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGACTGCTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--------...x.x...:..:...........::........x:xx.x.:.x::.....:..::.:..x..x:.....:.. 7M8I73M 57/80 71.2% 88/94230402 0.0% 8/80 10.0% -73934908 -20295494 +3698 chr4 + 190214555 2113718 2113717 2113800 83 CGTGGTGGTACATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:..:.--....:.:............:........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -73919479 -20310923 +3360 chr4 + 190214555 2148527 2148526 2148609 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::........x.xx.x...x::...........:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -73884670 -20345732 +3011 chr4 + 190214555 2149286 2149285 2149340 55 CCCTATCTCAAAAACAAACAAACAAACAAACAAACAAACAACAAAAACCCAAAAC chr4 + 94230402 26431512 26431511 26431566 26431512 26431511 26431566 55 CTCCTTTCCAAAAAAAAACCAGAAAACAAACAAACAAACAGAAAAACTCCAAAAC .:.:x.::......x....x.:x.................:x....x:....... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -24282226 -69948176 +3645 chr4 + 190214555 2177614 2177613 2177687 74 GACCCTGGGCAAGGCACATGTACGTTAACCTTTCTATACCTCAGTTTTCTCATCTGTAAACTGGGACTGATAAT chr4 + 94230402 83501141 83501140 83501207 83501141 83501140 83501207 67 GACTCTGGGCAAATTAC-------TTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGT ...:........:x:..-------.......x.x.:.:...........:..:.......x...::......:. 17M7D50M 53/67 79.1% 67/94230402 0.0% 7/67 10.4% -81323527 -12906875 +3408 chr4 + 190214555 2185606 2185605 2185688 83 CATGGTGGCACGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGTCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--....:.:.........::.:........:.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -73847591 -20382811 +3242 chr4 + 190214555 2189499 2189498 2189626 128 CATGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG---------GCAGAGCTTGCAGTAAGCCAAGATTGTGCC-----ACTGCACTCCAGCCTG--GGCGACAGAGAG chr4 + 94230402 76033197 76033196 76033337 76033197 76033196 76033337 141 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAG ..::....:.x:..--......:...........::........x.xx.x...xx:.x.........:..---------.:...:.x..xx.:x.:x..::xx......-----x....x.-.....x..--.:.x:....... 14M2D54M9I30M5I7M1D8M2I12M 89/125 71.2% 141/94230402 0.0% 19/125 15.2% -73843698 -20386704 +3210 chr4 + 190214555 2202594 2202593 2202666 73 TGCTCCTATAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x.:....:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -73830611 -20399791 +3023 chr4 + 190214555 2204096 2204095 2204161 66 CAAAACTCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAGATAAATGAAACAAAAGGCTGGTTCT chr4 + 94230402 47547210 47547209 47547275 47547210 47547209 47547275 66 CAATGCTCTTCAGTACAAAAAGAAAAAAAAAAAAAACCAAAACAAAACAAACGACAGGCTGTTTCT ...x:....x:x::.x.....:..............xx..:.:...xx....:.x......x.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -45343114 -48887288 +3280 chr4 + 190214555 2205754 2205753 2205817 64 AGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033214 76033213 76033277 76033214 76033213 76033277 64 AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...........::........x.xx:x...x.............:..x:xx:..:..:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -73827460 -20402942 +3147 chr4 + 190214555 2211646 2211645 2211705 60 GTGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGTTGGGAGGATCACTTGAGTCCAGGA chr4 + 94230402 76033204 76033203 76033263 76033204 76033203 76033263 60 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...::.x......::..........::........::xx.x.:.x.......::....:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -73821558 -20408844 +3067 chr4 + 190214555 2214873 2214872 2214934 62 ACACACATATACACATACATATACATATATATGTATATACATATACATATATATGTATATAC chr4 + 94230402 22600198 22600197 22600259 22600198 22600197 22600259 62 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGC ..........x.....:..x.:....::...::x.x...::....:x.:.:.:.......:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -20385325 -73845077 +3491 chr4 + 190214555 2218305 2218304 2218387 83 CATGGTGGCGCATCCCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGAAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...--.x...::.:...........::........x.xx.x...x.:........::....x:xx:..:...:. 12M2D69M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -73814892 -20415510 +3054 chr4 + 190214555 2222673 2222672 2222731 59 TTAATTGC------TTATCACCCACGGCCTTTTTTTTTTTTTTTTTATTTTTCCACAGGATCTAT chr4 + 94230402 25903000 25902999 25903064 25903000 25902999 25903064 65 TTAATTGTAACATGTCATTTACTATGGCCTTTTTTTTTTTTTTTTTACTTTTCCATAGCACATAT .......:------.:..:xx.:.:......................:.......:..x.:x... 8M6I51M 47/59 79.7% 65/94230402 0.0% 6/59 10.2% -23680327 -70550075 +3043 chr4 + 190214555 2228232 2228231 2228293 62 CTTTGCTAGTAGCAAAAAAAAAAAAAAAACACCAACAAAAAACAAAACAAAAAAACACCAAA chr4 + 94230402 26428820 26428819 26428881 26428820 26428819 26428881 62 CTTAGTTGTTGGAAAAAAAAAAAAAAAAAAACCAGCAGCAACAACAACAAAACAACAGCAAA ...x.:.:x.:.x................x....:..:x..xx.x.......x....x.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -24200588 -70029814 +3906 chr4 + 190214555 2231468 2231467 2231541 74 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -73801736 -20428666 +3042 chr4 + 190214555 2237480 2237479 2237526 47 GAGAGAGAAAGGGAGAGGAAGGAAGGGAAAGGAAGGAAAGGAAGGAG chr4 + 94230402 77174153 77174152 77174199 77174153 77174152 77174199 47 GAAAGACGTAGAGAAAGGGAGGAAGGGAAAGGAAGAGAGGGAAGGAG ..:...x:x..:..:...:................::.:........ 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -74936673 -19293729 +3157 chr4 + 190214555 2280377 2280376 2280450 74 GTGCACCTGTAGTACCAGCTACTCTGGAAGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCAAGGGTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......x.........:x::.:......x:xx.x.:.x.:.....:.....:..:.:x:..x.::.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -73752827 -20477575 +3218 chr4 + 190214555 2293613 2293612 2293682 70 CGTAGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:--....x......:.........:.::........x.xx.x...xx:.x.........:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -73739584 -20490818 +3463 chr4 + 190214555 2299592 2299591 2299676 85 GGGAGACCCTGTGGTTAAAAAGAGAA---------AAGAGAAGGAAGGGAAGGGAAGGGAGGGGAGGGAGGGAGGAAGGAAAGAAAAGGAAGAA chr4 + 94230402 32265536 32265535 32265625 32265536 32265535 32265625 90 GGGGGAGCCCGGGG----AAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA ...:..x..:.x..----..:.....---------.:x:........::...:..:.:....:..........:........:x..x:..::.. 14M4D8M9I59M 60/81 74.1% 90/94230402 0.0% 13/81 16.0% -29965944 -64264458 +3079 chr4 + 190214555 2299635 2299634 2299681 47 GGAAGGGAGGGGAGGGAGGGAGGAAGGAAAGAAAAGGAAGAAAGAAA chr4 + 94230402 44840877 44840876 44840923 44840877 44840876 44840923 47 GAAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAAAAAAA .:..:..:....:...:..:.....::...:........:...:... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% -42541242 -51689160 +4420 chr4 + 190214555 2308493 2308492 2308785 293 AGGAAGGAAGGAAGG--------GAGGGAGGGAGGGAGGGGAGGGGAGGGGGAGGAGAGAATGCAGAAAGAA---AGAGAAAGG-AAAGAAGGAAAGCAAGAAAGGAAGGAAGGAGAGACAGAGAGAGAGAAAGAAAGAAAGAAGACA----------------GAAAGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAAAGAAA------------------GAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAA----------GGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAAGGA chr4 + 94230402 24794254 24794253 24794604 24794254 24794253 24794604 351 AGAAAAGAAGTAAGACCCATTACGAAAGAGTGGAGAAAGAAAAAACAGAGTGAGGAAA-AGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGAAAATGATAGTAGAAAAAGGCACTAAACAATTAGGGTTAAAAAGAAACAAGAAAGAATAAGAGGAGCTTGAAGGGTAGGCAGGCCAACATTATTAAGTGGGAAGAAGCAAAAACTAATATGGGTACAGAAGGGAGGCTAGATATACTAAGACTGTGGAAGGGTAAAACATGCTTAGTGGGGAAGAAGTTTAAAAAAAAAAAAAAAAAGGGATGAATGTAAATGGGA ..:..:....x...:--------..::...x.::.:.:.::.:::x..:.x.....:.-.:x.:.:.....:---.........-...x:......:..x..:......x.x....::....xx:..:.:x:.x.:x::..:...:..----------------:...::..:x.........x:.:..:.:---...:.:x..:x.------------------.:.....:x.:...xx..x.x::.x.x....::..::xx...x.x:xx....xx.x::..:.:x..:.x.----------.....:.:xxx..:....:.:.:...:.....x.:.x.x.::x:... 15M8I35M1D13M3I9M1I63M16I28M3I12M18I70M10I47M 178/292 61.0% 351/94230402 0.0% 60/292 20.5% -22485761 -71744641 +5273 chr4 + 190214555 2308584 2308583 2308808 225 AGGAAGGAAGGAGAGACAGAGAGAGAGA-----AAGAAAGAAAGAAGACAGAAAG-----AAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAAGGAAGCTAGCTAGCTTCTGGGATTTT chr4 + 94230402 34805246 34805245 34805479 34805246 34805245 34805479 234 AAGCAGGAGGGAGAAGCTGGCTGTGACAGCTTTAATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAA-AGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAG--AGGAAAACAGTTTGTTGCAAGGTTTTT .:.x....:.....::.x.:xx.x..x.-----..x:...:.::.:.:.x.::..-----.....--.:...:.:..:...:..x.x:.:...x:::.x.x...x..x....x.x...........x.x..::.x.:..x..-.::..:...x....x:x:::....xx:.:.x:xx............:..x......:.:...x..--.....:x:..:.x.:.x.x:..x.... 28M5I22M5I5M2I75M1D65M2D27M 142/222 64.0% 234/94230402 0.0% 15/222 6.8% -32496662 -61733740 +3618 chr4 + 190214555 2308586 2308585 2308687 102 GAAGGAAGGAGAGACAGAGAGAGAGAAAGAAAGAAAGAAGACAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAG chr4 + 94230402 51148380 51148379 51148478 51148380 51148379 51148478 99 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAA-----ACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ...:....:..xx.............:........-----......:xxx....--::..x.:..x.x:..::.x:...:.:...:..:....::..::..x.. 35M5D14M2I48M 68/97 70.1% 99/94230402 0.0% 7/97 7.2% -48839794 -45390608 +3088 chr4 + 190214555 2308627 2308626 2308705 79 CAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112177 41112176 41112259 41112177 41112176 41112259 83 CAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ...:..:::......x..x...x...x....x.:..:..----.:.x.........::..x.x...:..x...:..::.x... 39M4I40M 56/79 70.9% 83/94230402 0.0% 4/79 5.1% -38803550 -55426852 +3715 chr4 + 190214555 2308627 2308626 2308787 161 CAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAA-AGAAAGAAAAAAGAAAAGAAAGGA---AGGAAGGAAAGAAAAGAGAG--AAAGAGGGAGGGA----GGA---AGGAAGGAAG chr4 + 94230402 1317353 1317352 1317530 1317353 1317352 1317530 178 CAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAG ....:..x.:::.:.x.x:x...xx.:::.x::.......----..:.x..x.::.x..::xx...::.::..:......:...:..........-..xx.:..x:.::.:x:....x..---....:...::...:......--x...x....:.:.----...---..:....... 40M4I51M1I24M3I20M2I13M4I3M3I10M 106/161 65.8% 178/94230402 0.0% 17/161 10.6% 991274 NA +3010 chr4 + 190214555 2308630 2308629 2308694 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x:... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -26706043 -67524359 +3177 chr4 + 190214555 2308638 2308637 2308735 98 AAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAG chr4 + 94230402 15855381 15855380 15855479 15855381 15855380 15855479 99 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGG .....:...:.::x:..-........xxx::.x..:xx...:......xxx.:.:::.:...:......:.:......:.x..:..::..x:.:...:. 17M1I81M 62/98 63.3% 99/94230402 0.0% 1/98 1.0% -13546743 -80683659 +3397 chr4 + 190214555 2308644 2308643 2308730 87 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAA-AAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:..:x.:...xx.x...x.........:..:...........:..-.:..xx...:...:x....x.x...::.x..x:... 51M1I36M 62/87 71.3% 88/94230402 0.0% 1/87 1.1% -72932863 -21297539 +3043 chr4 + 190214555 2308662 2308661 2308782 121 AAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAA chr4 + 94230402 34805279 34805278 34805399 34805279 34805278 34805399 121 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAA ..x...:..:.::::xx.::..x::.:.....x:..:..:.:.....:...x.x:..:..x.:::x.x...x::x..:.x.x...:::..:.:x.x..:..x..::x:.:........x.. 121M 68/121 56.2% 121/94230402 0.0% 0/121 0.0% -32496617 -61733785 +3014 chr4 + 190214555 2308678 2308677 2308735 58 AGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAG chr4 + 94230402 83690188 83690187 83690245 83690188 83690187 83690245 58 AGAAAAAGATATAAGAGAAGGAAACTCCAAAGAAAAGAAAAAAAGGAAAAAAAAATAG .....:.:.x.x....:...:...xxxx.............:..:.......:..x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -81381510 -12848892 +3186 chr4 + 190214555 2308697 2308696 2308787 91 GAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAAGGAAG chr4 + 94230402 58935721 58935720 58935811 58935721 58935720 58935811 91 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGG .:..x..:..:.:..x..x:.xx..:......x...:..:......::x.:.....x....::....::.:x:.x.x.:.::::..:..:. 91M 56/91 61.5% 91/94230402 0.0% 0/91 0.0% -56627024 -37603378 +3164 chr4 + 190214555 2308705 2308704 2308792 88 AAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAAGGAAGCTAGC chr4 + 94230402 84536568 84536567 84536654 84536568 84536567 84536654 87 AAGGGAAAGGGAAAGAAAAAAATAACAAAA-ATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGC ..::....:.:.......:...x..x....-.x......x:.:....:..::..:..::.....:..:::xx.x.x.:x:..::.... 30M1D57M 57/87 65.5% 87/94230402 0.0% 1/87 1.1% -82227863 -12002539 +3070 chr4 + 190214555 2308725 2308724 2308777 53 AAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGA chr4 + 94230402 59601148 59601147 59601200 59601148 59601147 59601200 53 AGAAAGAAAAGTAAATCAGGGAGAAATGACAAGAGAGAGAGAGGAAGGGAAGA .:.........x..:xx...:..:..x..x........:.....:.....:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -57292423 -36937979 +3602 chr4 + 190214555 2319773 2319772 2319880 108 CTCCAACAGAAGCAAGCGCTTTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGG---------TGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132453 92132452 92132569 92132453 92132452 92132569 117 ctacaGCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGA ..x..:...x:x:::.x:.x:......:.x...x:.:.x.....::xx.:...x..x........x---------..:....:x....:...x......x:....x....x...:.. 66M9I42M 72/108 66.7% 117/94230402 0.0% 9/108 8.3% -89812680 -4417722 +4131 chr4 + 190214555 2319781 2319780 2319882 102 GAAGCAAGCGCT-TTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGACA chr4 + 94230402 92132640 92132639 92132742 92132640 92132639 92132742 103 GAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACA .....x:..:x.-........:x....:..:....:....x........x.......:x...:..::x.x....x.x.:.x::::x....:.:xx:....... 12M1I90M 70/102 68.6% 103/94230402 0.0% 1/102 1.0% -89812859 -4417543 +4145 chr4 + 190214555 2319787 2319786 2319880 94 AGCGCTTTGGGGACGGTGGGGA--CGG-------TGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132575 92132574 92132677 92132575 92132574 92132677 103 AGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGA ..x:.x.......:.x......--...-------......:xx........x..:...:.x......x.x...x:..:x........x......::....:.. 22M2I3M7I69M 72/94 76.6% 103/94230402 0.0% 9/94 9.6% -89812788 -4417614 +3408 chr4 + 190214555 2319790 2319789 2319880 91 GCTTTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132452 92132451 92132542 92132452 92132451 92132542 91 gctacaGCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAA ...x::.x::..x.......:x........x...x:...x.....:.xx.:...x:.x......:.xx.....::x..:.:.::x....:. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% -89812662 -4417740 +4198 chr4 + 190214555 2319790 2319789 2319880 91 GCTTTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132497 92132496 92132587 92132497 92132496 92132587 91 GCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGA .....:...x:.x........xx.......x..:...::x....:.:.x......x.:...x:...x...:..::x..:.:.::x...... 91M 63/91 69.2% 91/94230402 0.0% 0/91 0.0% -89812707 -4417695 +4665 chr4 + 190214555 2319790 2319789 2319880 91 GCTTTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132461 92132460 92132551 92132461 92132460 92132551 91 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGA ..x:.......:x......:.x...x:...x.....::xx.:...x:.x........xx.......x..:.....x........x...... 91M 68/91 74.7% 91/94230402 0.0% 0/91 0.0% -89812671 -4417731 +3777 chr4 + 190214555 2319793 2319792 2319886 94 TTGGGGACGGTGGGGACGGTGGGGA---------TGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGACAGCAG chr4 + 94230402 92132572 92132571 92132674 92132572 92132571 92132674 103 TTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGG ...:....:x......:.x......---------.:x......:xx......:.x..:...:.x......x.x...x:.:.x....:.::x....:....::. 25M9I69M 66/94 70.2% 103/94230402 0.0% 9/94 9.6% -89812779 -4417623 +4758 chr4 + 190214555 2319793 2319792 2319880 88 TTGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132509 92132508 92132596 92132509 92132508 92132596 88 TTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGA .........xx.....:.x..:...::x....:...x......x.:...x:.:.x...:....x..:.....x....:...x...... 88M 66/88 75.0% 88/94230402 0.0% 0/88 0.0% -89812716 -4417686 +4253 chr4 + 190214555 2319794 2319793 2319895 102 TGGGGACGGTGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGACAGC-AGGACACTTAG chr4 + 94230402 92132645 92132644 92132747 92132645 92132644 92132747 103 TGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAG ...x:.::x.......:x....:.::....:....x......:.x.......:x...:...:x.x....x:x.:.x.:..x.......xx.-:.....:.... 91M1I11M 71/102 69.6% 103/94230402 0.0% 1/102 1.0% -89812851 -4417551 +4097 chr4 + 190214555 2319803 2319802 2319880 78 TGGGGACGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGA chr4 + 94230402 92132609 92132608 92132686 92132609 92132608 92132686 78 TGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGA .......xx........x..:.....x......x.x...x:.::x......::x....:...:...::...x...... 78M 58/78 74.4% 78/94230402 0.0% 0/78 0.0% -89812806 -4417596 +3562 chr4 + 190214555 2319809 2319808 2319888 80 CGGTGGGGATGGTGGGGATGGTGGGGACGGTGGGGACGGTGGGGATGGTGGGGACAATGGGAATGGTGGGGACAGCAGGA chr4 + 94230402 92132462 92132461 92132541 92132462 92132461 92132541 80 CGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGA ..x......::x........x...x:.:.x.....:.xx.:...x..x.......:xx...:...x..:.....x::... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% -89812653 -4417749 +3383 chr4 + 190214555 2345063 2345062 2345129 67 ATAGCCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033198 76033197 76033264 76033198 76033197 76033264 67 ACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..:x.x....x......:...........::........x.xx.x...xx:.x.........:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -73688135 -20542267 +3207 chr4 + 190214555 2355218 2355217 2355302 85 ATATATATATATATATATATATATATATATATATATATATATATATATATATATAATGATTCTTCTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 37508612 37508611 37508693 37508612 37508611 37508693 82 ACATATATATGTTAGTATACATATTTACATA-GTATTTA-ATACATATATGTATTAC-ATGCTTTTTTTTCTTTTTTTTTCCAAG .:........:.xx:....:....x..:...-:...x..-...:......:...x.:-..x...:.....:.........:::.. 31M1D7M1D17M1D27M 62/82 75.6% 82/94230402 0.0% 3/82 3.7% -35153394 -59077008 +3486 chr4 + 190214555 2355235 2355234 2355299 65 TATATATATATATATATATATATATATATATATATATAATGATTCTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823328 7823264 7823263 7823328 65 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.x..x.x.x.......:x..:............. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -5468029 -88762373 +3014 chr4 + 190214555 2369833 2369832 2369882 50 ATTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTC chr4 + 94230402 22344084 22344083 22344133 22344084 22344083 22344133 50 ATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCTGACATAGAAACTC ....:x....x:.............:.........:...x.:...:x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -19974251 -74256151 +3848 chr4 + 190214555 2406236 2406235 2406301 66 GTGGTGCACACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .........:--....:.:.........:..:........x.xx.x...x.............:.. 10M2D54M 53/64 82.8% 64/94230402 0.0% 2/64 3.1% -73626965 -20603437 +3203 chr4 + 190214555 2472594 2472593 2472641 48 AGTCTCTTAAAAAAAAAAAAAAAAAAGGGCGGCAGGGGGAAAGAAAGA chr4 + 94230402 72642756 72642755 72642803 72642756 72642755 72642803 48 AGTCCCTTGAAAAAAAAAAAAAAAAAGAGTTGCAAGGAGAGATAAAGA ....:...:..................:.:x...:..:..:.x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -70170162 -24060240 +3408 chr4 + 190214555 2473244 2473243 2473326 83 CATGGTGGCACGCTCCTGTAGTCCCAGCTACTTGAGGAGCTGAGGTAGGTTAATCGCTTGGGCCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..x.x......:............:::......x:xx..x..x.:....::.....:..x.xx:.....:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -73559953 -20670449 +3937 chr4 + 190214555 2477444 2477443 2477514 71 ACATGGTGGTACATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.....:..:.--..................::........x.xx.x...x::...........:.. 15M2D54M 55/69 79.7% 69/94230402 0.0% 2/69 2.9% -73555752 -20674650 +3117 chr4 + 190214555 2483664 2483663 2483746 83 CATGGTGGTGGGTTCCTGTAATCCCAGCTAGTTGGGAGGCTGAGGCACAAGAATTGCTTGAACCTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--:x.x....:.:.......x...::........x.x::x...x::........::.:..x.xx:.....:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -73549533 -20680869 +3456 chr4 + 190214555 2490956 2490955 2491026 71 GGCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAGATTCCTTGAGCCCAAGAGTTCAAGGCT chr4 + 94230402 76033203 76033202 76033273 76033203 76033202 76033273 71 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ..:....x......:...........::........x.xx.x::.x:x.....:....::..:.:x:.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -73542247 -20688155 +3337 chr4 + 190214555 2499264 2499263 2499312 49 AAACTTCATTTAGTGTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGAGA chr4 + 94230402 45039843 45039842 45039888 45039843 45039842 45039888 46 AAATTTCA---AGAGTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTAAGA ...:....---..x...............................:... 8M3D38M 43/46 93.5% 46/94230402 0.0% 3/46 6.5% -42540579 -51689823 +3129 chr4 + 190214555 2499273 2499272 2499310 38 TTAGTGTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGA chr4 + 94230402 14281229 14281228 14281266 14281229 14281228 14281266 38 TTAGGTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGA ....xx................................ 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -11781956 -82448446 +3077 chr4 + 190214555 2508552 2508551 2508602 51 GTTGGTTTTGTTTTTTTGTTTGTTTGGTTTTTGTTTTGTTTTGTTT-TGTTT chr4 + 94230402 73657895 73657894 73657946 73657895 73657894 73657946 52 GTTGCTATTGTTTATTTGTTTACTTGTTTTTTGTTTTGCTTTGTTTCTGTTT ....x.x......x.......::...x...........:.......-..... 46M1I5M 44/51 86.3% 52/94230402 0.0% 1/51 2.0% -71149343 -23081059 +3398 chr4 + 190214555 2508557 2508556 2508611 55 TTTTGTTTTTTTGTTTGTTTGGTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTT chr4 + 94230402 25576006 25576005 25576060 25576006 25576005 25576060 55 TTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTT ..:..x.....x.........x..x...x..x................:x..... 55M 46/55 83.6% 55/94230402 0.0% 0/55 0.0% -23067449 -71162953 +3117 chr4 + 190214555 2508572 2508571 2508614 43 TGTTTGGTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTGTT chr4 + 94230402 72938547 72938546 72938589 72938547 72938546 72938589 43 TGCTCGGTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT ..:.:....x..x...........................x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -70429975 -23800427 +3038 chr4 + 190214555 2508578 2508577 2508627 50 GTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGTTTTGTTTTT chr4 + 94230402 25315984 25315983 25316033 25315984 25315983 25316033 50 GTTTTGGTTTTGATGTTTTTTGTATGTTGTTTTTGTTTTGTTTCGTTATT .....x......x.x.x......x.x.................:...x.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -22807406 -71422996 +3000 chr4 + 190214555 2508591 2508590 2508631 41 TTTGTTTTGTTTTTTGTTTTTGTTTTGTTTTGTTTTTGAGA chr4 + 94230402 60657974 60657973 60658014 60657974 60657973 60658014 41 TTTTTTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTTCAAAA ...x...x............................::.:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -58149383 -36081019 +3313 chr4 + 190214555 2520751 2520750 2520820 70 AAGAGCAAAACCCCATCTCAAAAAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATAATAGAGTA chr4 + 94230402 74710666 74710665 74710735 74710666 74710665 74710735 70 AAAATTAAAATGATTTCTGAACAAAAGAAAAATAAAGAGAAATAATAATAATACTACTAATAATAAAGTA ..:.x:....:xx:x...x..x....:.....x...:.:x.............x..x........:.... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -72189915 -22040487 +3114 chr4 + 190214555 2520769 2520768 2520813 45 CAAAAAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATAA chr4 + 94230402 74710687 74710686 74710731 74710687 74710686 74710731 45 CAAAAGAAAAATAAAGAGAAATAATAATAATACTACTAATAATAA .....:.....x...:.:..............x..x......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -72189918 -22040484 +3032 chr4 + 190214555 2524209 2524208 2524280 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGACTCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::...x....x.xx.x..xx.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -73508997 -20721405 +3124 chr4 + 190214555 2526437 2526436 2526506 70 CGTGGTGGTGGGTGCCTATAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x::.--.:..:.:.........:..:........x.xx.x...x.:.......:...:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -73506760 -20723642 +3295 chr4 + 190214555 2527417 2527416 2527499 83 CATGGTGGCGGGCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x....:.:........:..::........x.xx.x...x::..x......:.:..x:xx:.....:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -73505780 -20724622 +3317 chr4 + 190214555 2529075 2529074 2529148 74 GTGCACCTGTAATCCCAGCTGCTAGGGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:......:..x.::........x.xx.x...x.:......:..:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -73504129 -20726273 +3453 chr4 + 190214555 2529378 2529377 2529449 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -73503828 -20726574 +3773 chr4 + 190214555 2536787 2536786 2536919 133 ACCCCGCGCAGCGCCCCCCGGCTGGCCGGAGCG--CCCGCCGCCGCGGCCGCCTCAGCCTCCCCGCCTTCCCCGCCCTCCGCCGCCGCCCGCGGCCCCCGCGCCCGCTCTGCGCCCCTCTCCCCGCCCGCCATGA chr4 + 94230402 82217740 82217739 82217860 82217740 82217739 82217860 121 ACCCAGCGCAGAGCTGC--GGAAGGAGGGGGTGGCCCCGCTGCCGGCACCCCCCGAGCT------------CCGCTCCCCACCGCCCCCCGCGGACTCTGCGCGGCCGCTGAGCGCCGTTCCCCGCCCGCTATAA ....x......x..:x.--..xx..xx..:.:.--.....:....xx:..x..:x...:------------....:.:..:.....x.......x.:.:....xxx.x...x..x..x:...........:..:. 17M2D14M2I24M12D64M 84/119 70.6% 121/94230402 0.0% 16/119 13.4% -79680953 -14549449 +3518 chr4 + 190214555 2539988 2539987 2540060 73 TGCACTTGTAATCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTGCTTGAACCTGGGAGATGTAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:.::..:.....x.xx.x...x::........::.:..x.x.:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -73493217 -20737185 +3126 chr4 + 190214555 2553350 2553349 2553399 50 AATTAAGTAAAGTTCTAATTTCCCTTCTTTTTGTTTTTTTTTTTTTTTTT chr4 + 94230402 84628494 84628493 84628543 84628494 84628493 84628543 50 AGTTAAGGAGAATTCCAACATCTCTTCTTTCTGTGTTTTTTTTTTTTTTT .:.....x.:.:...:..:x..:.......:...x............... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -82075144 -12155258 +3003 chr4 + 190214555 2568943 2568942 2568986 44 ATTCAGATTTCTTTTGTTGTTGTTGTTTTGCTTTTTTTTTTTTT chr4 + 94230402 36956638 36956637 36956681 36956638 36956637 36956681 44 ACTCAGTTTTCTGTTGTTGTTGTTGGTTTGTTGTTTTTTTTTTT .:....x.....x............x....:.x........... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -34387695 -59842707 +3228 chr4 + 190214555 2568950 2568949 2569003 54 TTTCTTTTGTTGTTGTTGTTTTGCTTTTTTTTTTTTTTTTTTTTTGATCTTGCT chr4 + 94230402 7230430 7230429 7230483 7230430 7230429 7230483 54 TTTTTTTTGTTGTTGTTGTTTTACATCTCTATATTTTTTCTTTTTAACCTTATT ...:..................:.x.:.:.x.x......:.....:.:...::. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -4661480 -89568922 +3002 chr4 + 190214555 2568953 2568952 2568989 37 CTTTTGTTGTTGTTGTTTTGCTTTTTTTTTTTTTTTT chr4 + 94230402 69642675 69642674 69642711 69642675 69642674 69642711 37 CTTTTTTTGTTGTTGTTTTGCTTTTTTTTTTTATTTT .....x..........................x.... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -67073722 -27156680 +3172 chr4 + 190214555 2581000 2580999 2581071 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -73452206 -20778196 +3346 chr4 + 190214555 2590341 2590340 2590445 105 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCATTTGAACTCGGGAGGCAGAGGTTGCAGTGAGCCAAGATGGCGCCA--------------------CTGCATTCCAGCCTGGTGAC chr4 + 94230402 76033211 76033210 76033328 76033211 76033210 76033328 118 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGC-TCCCAGCATGGTGAC ......:...........::........x.xx.x.:.x..:......:.:.:..x:xx:..:..:..------..x...::....--------------------....-.:.....x....... 67M6D12M20I4M1D15M 73/98 74.5% 118/94230402 0.0% 27/98 27.6% -73442870 -20787532 +3160 chr4 + 190214555 2590472 2590471 2590539 68 AAAACAAAAAAAAACAAAAAAAAACAAAAAAAAAC--AAAAAAAAAACAAAACAAAATTAAAAAACAGAA chr4 + 94230402 51142799 51142798 51142868 51142799 51142798 51142868 70 AAAACACAAAAAAGTATAAAAATCTAAAAAAAGACCCAAAAAAAAAACCAAACAAAAAAAGTAGCCAGAA ......x......::.x.....xx:.......:..--...........x........xx.:x.:x..... 35M2I33M 53/68 77.9% 70/94230402 0.0% 2/68 2.9% -48552327 -45678075 +3524 chr4 + 190214555 2590887 2590886 2590968 82 CGTGGTGGCGCGCGCCTGTAATCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:::....:..:..--....:.:...........:x........x.xx.x...x..........::.:..x.xx:..:..:. 14M2D66M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% -73442310 -20788092 +3059 chr4 + 190214555 2594790 2594789 2594845 56 ACTCAGTTTCTTTCTTTTTCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507629 80507628 80507683 80507629 80507628 80507683 55 ATTTAATTTCTA-CTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT .:.:.:.....x-...::.....x..x..................x.:........ 12M1D43M 45/55 81.8% 55/94230402 0.0% 1/55 1.8% -77912839 -16317563 +3348 chr4 + 190214555 2600984 2600983 2601060 77 GTGGCACATGCCTGTAGTTGCGGCTACACAGGAGGCTGAGGCAGGAGGGTCGCTTGAGCCCAGGAGTTCTGGGCTGT chr4 + 94230402 76033201 76033200 76033275 76033201 76033200 76033275 75 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ....::..:.--.......x.:.....x::::........x.xx.x.::x.:.....:.....:..:.:........ 10M2D65M 53/75 70.7% 75/94230402 0.0% 2/75 2.7% -73432217 -20798185 +3050 chr4 + 190214555 2601208 2601207 2601269 62 CTTTTTATTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTCCTGAGATGGAGTTTCTCTCTG chr4 + 94230402 44980315 44980314 44980376 44980315 44980314 44980376 62 CCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAGATGTTTGCTG .:....x:......:x.:............:.........xx.::....:..x.x:.:x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -42379107 -51851295 +3897 chr4 + 190214555 2612368 2612367 2612441 74 GTGCACCTGTAATCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.:.......:.::........x.xx.x...x.............:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -73420836 -20809566 +3303 chr4 + 190214555 2617224 2617223 2617280 57 CAGAAGTATGTTTTTATTATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792608 24792607 24792664 24792608 24792607 24792664 57 CAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .....x..:x.x.x..xx...................x:........x......... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% -22175384 -72055018 +3027 chr4 + 190214555 2617232 2617231 2617282 51 TGTTTTTATTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 24792614 24792613 24792664 24792614 24792613 24792664 51 TACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .::..x.:.x.x...................xx........x......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -22175382 -72055020 +3201 chr4 + 190214555 2633753 2633752 2633835 83 CGTGGTGGCACGCGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::.:..--.:..:.:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -73399444 -20830958 +3691 chr4 + 190214555 2644989 2644988 2645058 70 TGAGCATATTTCCATTTCAAAATATATATGTGTATATATACATGAATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857590 6857589 6857656 6857590 6857589 6857656 67 TGGGCATAATTCC---TCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ..:.....x....---....:.x......::...:...:::..::..........x...........x.. 13M3D54M 53/67 79.1% 67/94230402 0.0% 3/67 4.5% -4212601 -90017801 +3869 chr4 + 190214555 2649541 2649540 2649614 74 GTGCACTTGTGGTTTCAGCTACTCGGGAGGCTGAGATGGGAGGATCACTTGAGCCTAGGAGGTTGAGGCTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:...:........:.::........x:xx.x.:.x.......:..:..:..x..x:......:. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -73383663 -20846739 +3186 chr4 + 190214555 2664529 2664528 2664573 45 GTACACCTTTCTCTCTCTCTATTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 13065000 13064999 13065044 13065000 13064999 13065044 45 GTAAACCTTTCTCTTTCTCTCTCTTCTATCCTTTTTTTTTTTTTT ...x..........:.....x.:....x..:.............. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -10400471 -83829931 +3025 chr4 + 190214555 2668775 2668774 2668845 71 TTTTCCTTTTCCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTTTTCCTTTTCCTTTTCTTTTCCTTTT chr4 + 94230402 87898158 87898157 87898228 87898158 87898157 87898228 71 TTTTAATTTTCATTTCTGTCTCATGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTT ....xx.....x.:...x....x.x..x:x.:::.x::x....x....:......:..........:.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -85229383 -9001019 +3019 chr4 + 190214555 2678342 2678341 2678381 40 TTTGTTTTGGTTTTGGTGGTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 56136692 56136691 56136731 56136692 56136691 56136731 40 TTTGTTTGGGTTTTGGTGGTTTTTTTTTTTTTTTCCCCTG .......x..........................::::.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -53458350 -40772052 +3359 chr4 + 190214555 2687394 2687393 2687458 65 TTACAGATGAGAAAACTAAAGCACAAAAAGATTGAGTGATTTGCCTGAGGTCACACAGCTAGCAA chr4 + 94230402 82283131 82283130 82283195 82283131 82283130 82283195 65 TCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGA .:.:.x...:.:.....::::....::x.....:.....:.x:...:...........:...::. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -79595737 -14634665 +4357 chr4 + 190214555 2703832 2703831 2703923 92 CATGGTGGTGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAGCCCAGGAGTTTGAGGCTGCGGTGTGTCATG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::..........--......:...........::........x.xx.x...x.:..x..:.....:..:..x:.....::.x:::.x... 14M2D76M 66/90 73.3% 90/94230402 0.0% 2/90 2.2% -73329365 -20901037 +3266 chr4 + 190214555 2711310 2711309 2711357 48 ATAGATAATTTTTCCTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTT chr4 + 94230402 23572643 23572642 23572690 23572643 23572642 23572690 48 ATATATAATTTAACCTTCTGTTTTTGTTTGTTTGTTTGTTTTGTTTTT ...x.......xx....:.x.x.......................... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -20861333 -73369069 +3006 chr4 + 190214555 2711326 2711325 2711364 39 TTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTTGAGATGG chr4 + 94230402 89314596 89314595 89314634 89314596 89314595 89314634 39 TTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGG .....x...........................x..x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -86603270 -7627132 +3475 chr4 + 190214555 2712969 2712968 2713047 79 GTGGTGCATACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x......:.:.........::........x.xx.x...x::........::.:..x.xx:..:..:.. 8M2D69M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -73320232 -20910170 +3784 chr4 + 190214555 2713275 2713274 2713348 74 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.::........x.xx.x...x::...........:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -73319929 -20910473 +3997 chr4 + 190214555 2717618 2717617 2717696 79 CAGGCATGCACTTGTAGTCCAAGCTACTCAGGAGGCTGAGGCCAGAGGATCACTTGAACCTAGGAGTTTGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...xx:.....x......:.x.......::::........x..x.x.:.x..........:..:..:..x:..:..:.. 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -73315581 -20914821 +3380 chr4 + 190214555 2723783 2723782 2723824 42 TGGGGTTTCTGGGTTTTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 27280219 27280218 27280260 27280219 27280218 27280260 42 TGGAGTTTCTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTT ...:......xx.............................. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% -24556436 -69673966 +3086 chr4 + 190214555 2724245 2724244 2724301 57 CCATTCACTTCCTTTTCCCAACTTTCTATATTCATTTATTTTCTTTTCCATCTGTTT chr4 + 94230402 48431897 48431896 48431953 48431897 48431896 48431953 57 CTGTTCATTTCCCTTTTCCGACTTTTTATACTTCTTTATTTTCTTTTAGAGTTATTT .::....:....:...:..:.....:....:.:x.............xx.x:.:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -45707652 -48522750 +3279 chr4 + 190214555 2725179 2725178 2725242 64 CTGTCTCTATTTTTTAATTAAATTAAAAACTATATATATATGTATGTATATACACACACATATA chr4 + 94230402 32801984 32801983 32802047 32801984 32801983 32802047 64 CTTTTTCTATCCATTGATACATTAAAAAATTATGTGTGTATATATGTATATACGCACACATACA ..x.:.....::x..:..xx.x.x.....:...:.:.:...:...........:........:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -30076805 -64153597 +3171 chr4 + 190214555 2731055 2731054 2731138 84 ACGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTCAACGTGGGAGGCGGAGGCTTCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::......--...x....:.:...........::........x.xx.x...x.....x...x::.:..x:xx:....x:.. 11M2D71M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% -73302141 -20928261 +3096 chr4 + 190214555 2735022 2735021 2735081 60 TATATATATACACACACATATATATACACACACACATATATATACACACACACAGAGAGA chr4 + 94230402 23247723 23247722 23247782 23247723 23247722 23247782 60 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAA .:.:.:...:.........x...:x...:.:::...:.:...:.........x:..:.:. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -20512701 -73717701 +3271 chr4 + 190214555 2737159 2737158 2737232 74 GCGCACCTGTAGTCCCAGCTACTTCGGAGGCTGAGGCAGGATAATCACTTGAGCCCCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:..........x::........x.xx.xx..x.......:...x.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -73296045 -20934357 +3154 chr4 + 190214555 2756376 2756375 2756564 189 CCCGGTGCGCCCCGCCCACCCACAACAGCCCGGCCCCGCCCTCCCCCACGCAGCCCCGCCCCCCGCGCAGCCCC------GCCCTTCCC-----------------------CGCGCAGCCCC--GCCCGACG----GCAGCCCGCCCAGCCCCTTCTCGCCCGGCCCCACCCCTCCCACCGCCTACAGCCCGGCCCCGCCCCTGCCGTCCGCACCCGTCCGGG chr4 + 94230402 68952416 68952415 68952637 68952416 68952415 68952637 222 CTCCGTGCCTACCGCACACCGAGAGGAGCGCGGCCCCGTCCTCCCCCGGGGGCTCTCTCCTCCCGCAAGGCCCCCCCAGAGCACTGCCCGTCTGTTTTGGGGAGGGGTGCTGCGTGAAGCCCCCGGCACGGTGACTTGCATCTTCCCCGGGGGCAGCGCCCACAGCTCCGCGCCTCCACTCACCCCCTccgcgcccgcgcagccaccg--cgcgcgcgcacggg .:.x....x:x....x....x.x.:x...x........:........:x.x:x:.:.x..:.....:x:.....------..x..x...-----------------------..:.x......--..x..::.----...x.::x...:.xxx.xx.x.x.x.:..:..:.x.....xx:.:..:x.xx.x..x..x...xx.::...--...:.x..:x.... 74M6I9M23I11M2I8M4I71M2D14M 120/187 64.2% 222/94230402 0.0% 37/187 19.8% -66196040 -28034362 +3406 chr4 + 190214555 2771633 2771632 2771715 83 CGTGGTGGTACACACCTGTAGTCCCAGCCACTTGAGAGGCTGAGGTGGGAGGATCGCTTAAGCCCAGGAATTTGAGGTGGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:...:--......:.....:......:........x:xx.x.:.x.:...:.:.....:.::..x:..:x.:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -73261564 -20968838 +3121 chr4 + 190214555 2774192 2774191 2774260 69 GTGGTGGCGGACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:...........::........x.xx.x...xx:.x...:.....:.. 6M5D58M 50/64 78.1% 64/94230402 0.0% 5/64 7.8% -73259009 -20971393 +3518 chr4 + 190214555 2777663 2777662 2777739 77 AATAAGTCCTACTAAAAACAGTATGAAGCCGATTAAATTTGTTTTT-----------------CTTTTTAGTTTTTCTTTTTTTTTTTTTTGAG chr4 + 94230402 34648139 34648138 34648225 34648139 34648138 34648225 87 AATGAGTCCTATTAAAAA-------AAATCAACTAAAATTATATTTTCACTTTATATGTTGATCTTTTTAATTTTTCTTTTTTTTTTTTTTGAG ...:.......:......-------..::.:.:....x..:.x...-----------------.......:....................... 18M7D21M17I31M 60/70 85.7% 87/94230402 0.0% 24/70 34.3% -31870476 -62359926 +3106 chr4 + 190214555 2780330 2780329 2780388 59 GCACCTGTAGTCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATGACGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:........x..::........x.xx.x...xx..x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -73252876 -20977526 +3005 chr4 + 190214555 2802390 2802389 2802452 63 TCTCAAAAAAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATA chr4 + 94230402 6857600 6857599 6857662 6857600 6857599 6857662 63 TCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ..::x..:........::..:::.::..:.:x:.........x...........x..x.x... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -4055210 -90175192 +3804 chr4 + 190214555 2802400 2802399 2802504 105 ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA----TGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATG chr4 + 94230402 21109195 21109194 21109303 21109195 21109194 21109303 109 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...:........x.x....x.:..:.x.:.:...::x::::.:..----....:x...::..:....:x:...:x.x.........:.:.:..x.....:..::.:.:. 45M4I60M 68/105 64.8% 109/94230402 0.0% 4/105 3.8% -18306795 -75923607 +3055 chr4 + 190214555 2802401 2802400 2802483 83 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x.................:.xx:...:x.:..::....:.:x:.:::.:.x....:::.::.::.:.:.. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% -83032132 -11198270 +3286 chr4 + 190214555 2802403 2802402 2802486 84 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x::.x.....x.................:.xx:...:x:::..:......:x:.::..:.x.:..:.::::..:.:.:... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -83032130 -11198272 +3397 chr4 + 190214555 2802405 2802404 2802513 109 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTAT--ATATATGTGTATATGTATATATATGTTTGTATAT chr4 + 94230402 5214211 5214210 5214321 5214211 5214210 5214321 111 TGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....:x::..x.:::.::.x:.......:.::x....x.::::.:.:..x.::......::..x..:......:.--::.x.:....:.:..:..::.x....x..:.:.. 75M2I34M 65/109 59.6% 111/94230402 0.0% 2/109 1.8% -2411806 -91818596 +3343 chr4 + 190214555 2802413 2802412 2802488 76 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.................:.xx:....x.:...:..:...:x:..:..:.x.:.::::::...:.:.::.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -83032128 -11198274 +4222 chr4 + 190214555 2802414 2802413 2802576 163 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATG---TTTGTATATATGTGTATATATATATGTATGTGTGTGTGTGTATATATATGTGTATATATGTATATATGTGTA chr4 + 94230402 79265519 79265518 79265678 79265519 79265518 79265678 160 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA---GCACTTGTATTTATACATTTATGAGTA .............::........xx...:...::...:.:.....:::.:::.x:::...x...:.x:.:.---::.:x.x......x...---....:x.x.x..x..:..:.x..:::.x.x...:x...:x:.---::.:x.....x...::..x....x... 71M3D17M3I42M3D27M 100/157 63.7% 160/94230402 0.0% 9/157 5.7% -76463105 -17767297 +3276 chr4 + 190214555 2802415 2802414 2802484 70 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .....x.................:.xx:.:.:x::...::.:...:x...:....x....:::.:...:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -83032126 -11198276 +3494 chr4 + 190214555 2802416 2802415 2802590 175 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATGTTTGTATATATGTGTATATATATATGTATGTGTGTGTGTGTATATATATGTGTATATATGTATA-TATGTGTATATGTATATATATG chr4 + 94230402 79265519 79265518 79265674 79265519 79265518 79265674 156 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCA--------CACGCAAACATATTTGTGTCCACA-----ACACCTCTATATAAATGCAC-------TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATG .............::........xx.....:..:...:::.....:.--------:.:.::x.:....x.....x:.::-----.:.:x.:.:....x...:::-------.x..:x.x.x..x....::.x..::..x.x.:..x:..:x:.-:.:x.....x.:..:..x.... 47M8D24M5D20M7D42M1I22M 99/155 63.9% 156/94230402 0.0% 21/155 13.5% -76463103 -17767299 +3487 chr4 + 190214555 2802417 2802416 2802491 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.................:.xx.....x::..:::.:....x...::...x.:..:.:.:...:::::.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -83032124 -11198278 +3572 chr4 + 190214555 2802419 2802418 2802486 68 TGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...:...:..:x..:.:...x......:...:...........::.x.:.:..:..x.:.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -83831505 -10398897 +3147 chr4 + 190214555 2802421 2802420 2802486 66 TGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:..:..xx...:.::::x..x.:x..x............:...:.....:.::...:....... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -24523071 -69707331 +3234 chr4 + 190214555 2802421 2802420 2802495 75 TGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...................xx..:..x.::.:::...:..x:.::....x...::.:.::.::.:.::. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -83032120 -11198282 +3526 chr4 + 190214555 2802424 2802423 2802563 140 GTGTGTGTGTGTGTGTGTGTAT-------GTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATGTTTGTATATATGTGTATATATATATGTATGTGTGTGTGTGTATATATATGTGTATATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.x.....x:.:..x.:.:-------..::.x:....:x::.:x::.:.::.x:....:.::::.x....x.::::.:.:..x.::x.....::..x..:..:.:.:.::.:.x::.........:..::.x......::.:.. 22M7I118M 78/140 55.7% 147/94230402 0.0% 7/140 5.0% -2411751 -91818651 +3293 chr4 + 190214555 2802425 2802424 2802504 80 TGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAA----TACATGTTTATGCACACATACACACATG .....x.............:.....xx....:x.::..:......:x.----..:..:.x.:..:.:.::..:.:.:... 48M4D28M 54/76 71.1% 76/94230402 0.0% 4/76 5.3% -83032116 -11198286 +3881 chr4 + 190214555 2802433 2802432 2802540 108 TGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTATGTGTATATATATGTGTATATGTATATATATGTTTGTATATATGTGTATATATATATGTATGTGTGTG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x.:.:::.:...:.x.x....x.:....x...:....:x:::.....:x:.....:x.:..::...:.::.::.::x.x.........:.:....x..:..::.. 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% -18306757 -75923645 +3380 chr4 + 190214555 2802486 2802485 2802547 62 GTGTATATGTATATATATGTTTGTATATATGTGTATATATATATGTATGTGTGTGTGTGTAT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...::.::...x:..............:...:..:.:......::.x...:..::.x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -83831443 -10398959 +3185 chr4 + 190214555 2802496 2802495 2802561 66 ATATATATGTTTGTATATATGTGTATATATATATGTATGTGTGTGTGTGTATATATATGTGTATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:::....x.......:.:x..x.:x..x......:.......:.....:.:..::.:::..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -24522995 -69707407 +3909 chr4 + 190214555 2802514 2802513 2802624 111 ATGTGTATATATATATGTATGTGTGTGTGTGTATATATATGT------GTATATATGTATATATGTGTATATGTATATATATGTTTGTATATATGTGTATATATGTGTATATATGTG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x..:x....:..:...:.x.x....x.:....x.......------:....:x:..:..:x.:.:::......:x:..::x.:...:...........:x..:..:..::.:::. 42M6I69M 72/111 64.9% 117/94230402 0.0% 6/111 5.4% -18306673 -75923729 +3408 chr4 + 190214555 2802515 2802514 2802588 74 TGTGTATATATATATGTATGTGTGTGTGTGTAT--ATATATGTGTATATATGTATATATGTGTATATGTATATATA chr4 + 94230402 85834533 85834532 85834608 85834533 85834532 85834608 76 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA .:.x:..x.:.:.x...:...............--..:..x.::..:.......x...::...x....:.:.:... 33M2I41M 54/74 73.0% 76/94230402 0.0% 2/74 2.7% -83032018 -11198384 +3242 chr4 + 190214555 2802521 2802520 2802600 80 TATATATATGTATGTGTGTGTGTGTATATATATGTGTATATATGTATATATGTGTATATGTATATATATGTTTGTATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-------TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ....:....-------........x...:...::::....:.:xx......x...::.........:.x..x....:.:. 9M7D64M 54/73 74.0% 73/94230402 0.0% 7/73 9.6% -54064770 -40165632 +4143 chr4 + 190214555 2802523 2802522 2802636 114 TATATATGTATGTGTGTGTGTGTATATATATGTGTATATATGTATATATGTGTATATGTATATATATGTTTGTATATATGTGTATATATGTGTATATATGTGTATGTATGTGGT chr4 + 94230402 21109194 21109193 21109307 21109194 21109193 21109307 114 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGAT ....:....:...x.x....x.::...x...:....:x:.::....:x:.....:x.:..::...:.::.::.::x.x.........:...:.:x.....::.::::.:.x.:. 114M 70/114 61.4% 114/94230402 0.0% 0/114 0.0% -18306671 -75923731 +4508 chr4 + 190214555 2802619 2802618 2802738 120 TATGTGTATGTATGTGGTGTGTGTAT---ATATATATGTATATGTGTGTGTGTGTGTGTATATATATATGTATATATGTATGTATGTATATCTATATACACACACACACGTAACGTTAGGGAA chr4 + 94230402 85834505 85834504 85834626 85834505 85834504 85834626 122 TATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC-CTGGGGAA ...x..:xx.x....:..x..x..x.---..x:..x...:.x...................xx..:..x.:...:..:.:.:x..::..:.:...::.....:......:.::.-:.:..... 26M3I85M1D8M 83/119 69.7% 122/94230402 0.0% 4/119 3.4% -83031886 -11198516 +3703 chr4 + 190214555 2802626 2802625 2802725 100 ATGTA-TGTGGTGTGTGTATATATATATGTATATGTGTGTGTGTGTGTGTATATATATATGTATATATGTATGTATGTATATCTATATACACACACACACG chr4 + 94230402 85834516 85834515 85834616 85834516 85834515 85834616 101 ATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....-.x...xx.x.x...x:..x.:...x.:...............:.xx..:..x:::..:.......x:..::.:.x.x.::.:...:.......:. 5M1I95M 68/100 68.0% 101/94230402 0.0% 1/100 1.0% -83031890 -11198512 +3088 chr4 + 190214555 2802655 2802654 2802717 63 ATATGTGTGTGTGTGTGTGTATATATATATGTATATATGTATGTATGTATATCTATATACACA chr4 + 94230402 70094147 70094146 70094209 70094147 70094146 70094209 63 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA ..........x...x...x.:...:............x::.xx.x::..x..x.....:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -67291492 -26938910 +3092 chr4 + 190214555 2802674 2802673 2802724 51 TATATATATATGTATATATGTATGTATGTATATCTATATACACACACACAC chr4 + 94230402 44815600 44815599 44815650 44815600 44815599 44815650 51 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACAC ...:.:.:.:::..:.....x....:.........:.x......:...... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -42012926 -52217476 +3019 chr4 + 190214555 2840225 2840224 2840269 45 AAAAAAAACCAAAAAAAAAAAAAAAAAAAAGAAAACCACTGAAAT chr4 + 94230402 3494574 3494573 3494618 3494574 3494573 3494618 45 AAAAGAATCCAGAAAAAAAAAAAAAAAAAAGAAATTTCCTGAAAT ....:..x...:......................x::x....... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -654349 -93576053 +3420 chr4 + 190214555 2842270 2842269 2842345 76 GCACGTGCTGGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCCCTTGAGCCTAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......----....:...........::........x.xx.x.:.x.x.....:..:..:..x.:x:.....:.. 7M4D65M 54/72 75.0% 72/94230402 0.0% 4/72 5.6% -73190936 -21039466 +3233 chr4 + 190214555 2846790 2846789 2846841 52 CACTTCACTGCACTACTCTGTCTCTTTAAAAAAAAAAAAAAAAAAAAGCCGA chr4 + 94230402 5956329 5956328 5956380 5956329 5956328 5956380 52 CACTCCACTGCACTACTCTCTCTCTCTTTCAAAAAAAAAAAAACACAGCCAA ....:..............x.....:.xxx.............x.x....:. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -3109539 -91120863 +3555 chr4 + 190214555 2852121 2852120 2852238 118 CCACAGCACCCGGCCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTTCT-------TTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTT chr4 + 94230402 63697110 63697109 63697238 63697110 63697109 63697238 129 CCACAG-ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ......-..::x::::..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x....:.-------..:..:...::.....:.......:.:...:x.. 6M1D66M5I11M7I34M 78/117 66.7% 129/94230402 0.0% 13/117 11.1% -60844989 -33385413 +3276 chr4 + 190214555 2852136 2852135 2852257 122 TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCT-------TTC-----------TTTCCTTTCTTTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTC chr4 + 94230402 25762720 25762719 25762861 25762720 25762719 25762861 142 TCTCATCTTTGTCACTTTTTGTCTTTCACAATCACTTCCTTCCAATTCATTGCCCTCTATATGATTTCCAAAATACAAATATCTGGTCTTTCTTTTATTTATTTTGATCTCTTTCTTCTCTTTCTTCCTCTCACTTTTTTTC ...:x.....x.:x....:.x......x:xx.:x...:...:.--..:x..x.::...-------...-----------.x..:xx......:...x:..x:...xx.:......:.:........:..:..x....:.... 43M2I13M7I3M11I63M 84/122 68.9% 142/94230402 0.0% 20/122 16.4% -22910584 -71319818 +3237 chr4 + 190214555 2852150 2852149 2852259 110 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 36195258 36195257 36195367 36195258 36195257 36195367 110 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTT .....:...x.x:...::x....:.xx.xx:x:..........x:...:....:........x:..x:...xxx..:x:..x...x:...::.:x::.:..:.:..x:.. 110M 67/110 60.9% 110/94230402 0.0% 0/110 0.0% -33343108 -60887294 +3459 chr4 + 190214555 2852201 2852200 2852323 123 TTCTTTCCTTTCCTTTCTTTCCTTTCTTT----CCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTT chr4 + 94230402 48874866 48874865 48874992 48874866 48874865 48874992 127 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ....:..:.:.:.x:x:x.::....:.x.----.:..x:....:..:.x....:.x...x::..:...:x.::x..x.........:..x........x::..::xx.x:..x.x.:.....:.:.. 29M4I94M 76/123 61.8% 127/94230402 0.0% 4/123 3.3% -46022665 -48207737 +3849 chr4 + 190214555 2852205 2852204 2852320 116 TTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTC chr4 + 94230402 21704059 21704058 21704174 21704059 21704058 21704174 116 TCTCTCTTCTTTTTTGCAGCTAGTTCCTCTTCTTTTTTCTTTCTGATTCTTTCAGACTGTTTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTTC .::..:.:....:..x.xx:.xx.....:.::..:.........xx.......xxx.:x.::.....x:..x....x:.:...:xxx.x....x..:......:...::x:..... 116M 74/116 63.8% 116/94230402 0.0% 0/116 0.0% -18851854 -75378548 +3120 chr4 + 190214555 2852245 2852244 2852323 79 TTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTT chr4 + 94230402 23976501 23976500 23976579 23976501 23976500 23976579 79 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTT ....:...:x..:x:..x..:.x..:x.x:..:...:.x:..x.::x........::............:..xx..... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -21124256 -73106146 +3003 chr4 + 190214555 2852262 2852261 2852337 76 CTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTCTTTTTTTT chr4 + 94230402 26415982 26415981 26416057 26415982 26415981 26416057 76 CTGCTTTTTTTTCTTCCTCCACTTACTTGCCTGACTTTTGTTTTCTTTTTCTACCTTTCTTTGGCCTCCTTCTATT ..x.:..::..:......:.x:..x:..x.:.xx.....x..........:.x.:.......xx::..:..:.x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -23563720 -70666682 +3156 chr4 + 190214555 2852283 2852282 2852345 63 TTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTG chr4 + 94230402 69163347 69163346 69163409 69163347 69163346 69163409 63 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTG ...........x..........::.....:::...:.x:.::.x:...:.x..x...:..:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -66311064 -27919338 +3162 chr4 + 190214555 2881053 2881052 2881099 47 GAACATTTTGATGTATTTACTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 4454183 4454182 4454229 4454183 4454182 4454229 47 GAATATTTTAATGTATTTACTGATCTTTTTTTTTTTTTTTTTCAGGA ...:.....:...........xx.:.................:::.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -1573130 -92657272 +3255 chr4 + 190214555 2893473 2893472 2893542 70 CACAGTATTGTGCGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCATTTGAGCCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:--....:.x......:...........::........x:xx.x.:.x..:....:..::.:.. 7M2D61M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -73139724 -21090678 +3761 chr4 + 190214555 2970518 2970517 2970600 83 CATGGTGGCATGCACCTGTAGTCCGAGCTACTCGGGAGGCTGAGGCGGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.x.......:.::........x.xx.x...x...........:.:..x.xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -73062679 -21167723 +3653 chr4 + 190214555 2975172 2975171 2975245 74 GCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...........::........x.xx.x...x.:........::.:..x.xx:.::..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -73058032 -21172370 +3178 chr4 + 190214555 2979385 2979384 2979442 58 CAGAGGGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAGTGGCCAGGCACGG chr4 + 94230402 4339985 4339984 4340042 4339985 4339984 4340042 58 CAGAAGGATACTTTCCACCAAAAAAAAAAAAAAAGAACAAAAGAATGTCAAAGCATGG ....:...x...:.x:x:................:..x......:..x.x.:...:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -1360600 -92869802 +3515 chr4 + 190214555 2989042 2989041 2989112 71 CGTGGTGGCGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCAGGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:::....:..::.--......:...........::........x.xx.x...x..........x:..:.. 14M2D55M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -73044155 -21186247 +3175 chr4 + 190214555 2990208 2990207 2990256 49 ACTGTTGCTAGAATAAGGTGATTCTTCTTCTTCTTCTTCTTTTTTTTTT chr4 + 94230402 80468462 80468461 80468510 80468462 80468461 80468510 49 ACTGTAGATAAAACAGAATGTTTCTTCTTCTTCTTCTTTTTTTTTTTTT .....x.x..:..:.:::..x.................:.......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -77478254 -16752148 +3026 chr4 + 190214555 2994181 2994180 2994232 52 TTTCATTTATCTAGTTCTAATTTTTATTTTTATTTTTTTCCCTTTTTTGAGA chr4 + 94230402 29974190 29974189 29974241 29974190 29974189 29974241 52 TTCCATATATCTACATCTGATCTTTATTTCTATTTTTTTTTTTTTTCTGAAA ..:...x......xx...:..:.......:.........:::....:...:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -26980009 -67250393 +4272 chr4 + 190214555 3001065 3001064 3001183 119 AAATGAGACTATATATATATATATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATA--TGTGTATGTGTATATATATGTATATATGTGTATG chr4 + 94230402 21109177 21109176 21109297 21109177 21109176 21109297 121 AAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ....:..:xx..x.::x....:..:.....x.x....x.:....x........:x:.::.:..:x:..:..:x....x....:..--::..:x.x...:.....:.....:x..:..:... 85M2I34M 79/119 66.4% 121/94230402 0.0% 2/119 1.7% -18108112 -76122290 +3025 chr4 + 190214555 3001080 3001079 3001148 69 TATATATATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:..x....:.....x...x...x.....:............x:::xx.x::..x.......x.:.:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -67093062 -27137340 +3065 chr4 + 190214555 3001082 3001081 3001159 78 TATATATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTG chr4 + 94230402 39937175 39937174 39937252 39937175 39937174 39937252 78 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCATTTG ...............::...x....:..:xxx.x..:...:xxx:..::::...:.....x::...x.....:..x.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -36936093 -57294309 +3533 chr4 + 190214555 3001084 3001083 3001205 122 TATATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTA------------TATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.::...x..------------.....::x:.:.....xx::.:..:x.:..:..:.:..:x:...:x.x.:...:.........:x.....:..::.:::. 30M12D80M 71/110 64.5% 110/94230402 0.0% 12/110 10.9% -18108110 -76122292 +3849 chr4 + 190214555 3001086 3001085 3001223 138 TATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATAT---GTGTATGTGTATATATATGTA chr4 + 94230402 89812949 89812948 89813086 89812949 89812948 89813086 138 TATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA .......xx....x....---::.....x:..x..........:.x..x..::x.x::..:..:..::x.:x:x:..:::.....x:x.:.....:...........:.x..x..x.---..x.x.:..x.:.x::..... 18M3D96M3I21M 88/135 65.2% 138/94230402 0.0% 6/135 4.4% -86811863 -7418539 +3666 chr4 + 190214555 3001102 3001101 3001209 108 TGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x....:..:...:.x.x....x::..:.x.....:..xx:.:....::x::...::x....::.:.:..:x::..:x.x...:.....:.....:x..:..:... 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% -18108088 -76122314 +3200 chr4 + 190214555 3001106 3001105 3001171 66 TATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTGTATATATATGTA chr4 + 94230402 84187973 84187972 84188038 84187973 84187972 84188038 66 TAAATGTCTGTGTATCTGTGGATGTATGTATTCACGAGTATACATGAGTATGAGTATGTATCTGTA ..x..:.x...:...x....x....:.:...x:.:::.....:...x.....x....:...x.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -81186867 -13043535 +3844 chr4 + 190214555 3001115 3001114 3001257 143 GTATATATGTGTATGTGTATA-TATATAGGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATACATATATGTA chr4 + 94230402 89812946 89812945 89813086 89812946 89812945 89813086 141 GTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAA---GTTTTTATGAACAGGCATGTA ..x.......xx:...x.:.:-:......:..x..........:.x..x..::x.xx...:.....:.x::x:x:..:::.:.:.x:x.....:.....:.........x..x..x.xx.---..x.x...:x...x::..... 21M1I98M3D21M 91/140 65.0% 141/94230402 0.0% 4/140 2.9% -86811831 -7418571 +3639 chr4 + 190214555 3001142 3001141 3001206 65 GGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGT chr4 + 94230402 76709590 76709589 76709654 76709590 76709589 76709654 65 GGTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT .........:..:......x....:.x.:..x:.::...........x.:.:.x.......x... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -73708448 -20521954 +3335 chr4 + 190214555 3001143 3001142 3001254 112 GTATATATGTGTATGTGTAT---ATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATACATATAT chr4 + 94230402 89812946 89812945 89813060 89812946 89812945 89813060 115 GTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..x.......xx:...x.:.---.....x:..x..........:.x..x..::x.xx...:.....:.x::x:x:..:::.:.:.x:x.....:.....:.......::x..x.. 20M3I92M 72/112 64.3% 115/94230402 0.0% 3/112 2.7% -86811803 -7418599 +3834 chr4 + 190214555 3001156 3001155 3001287 132 TGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATAT----ATGTGTATGTGTATATATATACATATATGTATATATATGTGTGTA---TGTATGTATGTATACA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:x....:..:...:.x.x....x::..:.x.....:.::x:.:..:.::x:.....:x....:....:.----...:x.x.........:.:..::x.....:..::.:.:.x.xx..---.x.x...:x..:.... 71M4I45M3I16M 84/132 63.6% 139/94230402 0.0% 7/132 5.3% -18108034 -76122368 +3305 chr4 + 190214555 3001157 3001156 3001301 145 GTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTG----TATGTGTATATATATGTATATATGTGTATGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATA---CACATACATATATATG chr4 + 94230402 91734574 91734573 91734722 91734574 91734573 91734722 149 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT---TTTATACTTCAAATACTCATTTATG .::....x......x.x:x.:..xxx.::....x......x.x:x.:..----...:.x...::........xx..:x:x.x..x..:.x.x.......:.x:x.:.....::..x....:...---.x....---..x....x:..x.... 49M4I71M3D6M3I16M 94/142 66.2% 149/94230402 0.0% 10/142 7.0% -88733417 -5496985 +3185 chr4 + 190214555 3001167 3001166 3001266 100 ATGTA--TATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATACATATATGTATATATATGT chr4 + 94230402 40164254 40164253 40164355 40164254 40164253 40164355 102 ATGTAGTTGTAAGAGTATGATTACATATCCATTTAAAAGTGTTTGTCTACCTGTAATAAGAACTGTGTATGTGTGTGCATATACATATATCCTCTTATATGT .....--.:..x.x.....xx..:....x::.x..x.x....x...x..:x.:..xxx.x.xx...........:.::............x:x:x....... 5M2I95M 69/100 69.0% 102/94230402 0.0% 2/100 2.0% -37163087 -57067315 +3764 chr4 + 190214555 3001181 3001180 3001293 113 ATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATACATATATGTATATA--TATGTGTGTATGTATGTATGTATACACATACA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x....:....:.:.x.x...:x.:....x........:x:.::.:..:x:..:..:x.....:...:.::x:..:--.x.....:.....:.:.:x:...:..:::... 81M2I32M 71/113 62.8% 115/94230402 0.0% 2/113 1.8% -18108006 -76122396 +3638 chr4 + 190214555 3001208 3001207 3001315 108 TGTGTATATATATGTATATATGTGTATGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x....:..:...:.x.x....x::..:.x.....:...x:.:..:..:x::.:.::x.:..:.......:x:..:.x:x.:::.....:.....:x..:..::.. 108M 65/108 60.2% 108/94230402 0.0% 0/108 0.0% -18107982 -76122420 +3090 chr4 + 190214555 3001272 3001271 3001334 63 TGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC ...:.:....:........:x..xx:.x.:.:..:....:......x::...:.:..:..... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -44133905 -50096497 +3758 chr4 + 190214555 3005673 3005672 3005745 73 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCACTTGAACCTGGGAGGTGGAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.x....:.:.........::::........x.x..x...x..........::.:..x.xx:.....:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -73027531 -21202871 +3063 chr4 + 190214555 3009419 3009418 3009467 49 CTCAAAAAAAAAAAAAAAAAAAAAGATGAATTAATTGCTCTTAGAGCAA chr4 + 94230402 57631229 57631228 57631277 57631229 57631228 57631277 49 CTAGAAAAAAAAAAAAAAAAAAATGATGAGTAAATTCCCTTTAGGGCAA ..x:...................x.....:.x....x.::....:.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -54621810 -39608592 +3417 chr4 + 190214555 3014273 3014272 3014334 62 GGATACCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGACACAGGGTTTCGCTCTGT chr4 + 94230402 45847276 45847275 45847335 45847276 45847275 45847335 60 GGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT--CCCATGGATGTGTTCTGT ..x.:....:.x..............................--.x..x..x.x:.:..... 42M2D18M 50/60 83.3% 60/94230402 0.0% 2/60 3.3% -42833003 -51397399 +3425 chr4 + 190214555 3018019 3018018 3018095 77 AGAAGAAAAAAGGTTAAAAA-----AAAGCC----CTCATCATTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTAGATAGA chr4 + 94230402 64144286 64144285 64144371 64144286 64144285 64144371 86 AGAAGAAAGAAATCTCAAAACCCTAAGAGCTTCCACTCATCACTGCTATTTTCTCTCTCTCTCTCTTTTTTGTTTTTTCAGATAGA ........:..:x:.x....-----.:...:----.......:.x::x......:.:...:.:........x......:....... 20M5I6M4I51M 59/77 76.6% 86/94230402 0.0% 9/77 11.7% -61126267 -33104135 +3046 chr4 + 190214555 3018403 3018402 3018466 64 GTGCACCTGTAGTCCCAGCTTCTTGGGTGACTGAGATGGGAGGATCAGTTGAGCCCAGGAGTTT chr4 + 94230402 76033204 76033203 76033267 76033204 76033203 76033267 64 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ......x......:......x....::x.:.....x:xx.x.:.x..x....:.....:..:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -73014801 -21215601 +3009 chr4 + 190214555 3024832 3024831 3024977 146 TGGGCGACAGAGTGAGACTCCGTCTCAAAAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAAATATTTCTTTGCAGTTCTTTTAGTCATTAGCAAAAGTTCTTTGG--TTCTAGGGTTGTTCACTCAAATTAATTTAA chr4 + 94230402 91541686 91541685 91541819 91541686 91541685 91541819 134 TGAGTGGTAGGAAGAAAAAACATTTAAAACAAAAAACAACAAACAAACAACAACAACAACAAAATCAGTAG--------TCTGGGCTTCTCTTAA-----AGCTGGTATTATTGGGGATTTTTGTGTAATTCACTC-CATTACTTTGA ..:.:.::..::x..:.xxx.:.:.x...x..x......xx..xx...................:.....:--------.:..x:x....:...:-----...x::x:..x..x..--..:.x.x..x:.......-x....x...:. 71M8D16M5D16M2I18M1D11M 89/132 67.4% 134/94230402 0.0% 16/132 12.1% -88516854 -5713548 +3297 chr4 + 190214555 3024836 3024835 3024949 114 CGACAGAGTGAGACTCCGTCTCAAAAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAA---ATATTTCTTTGCAGTTCTTTTAGTCATTAGCAAAAGTTCTTTGGTT chr4 + 94230402 78095307 78095306 78095415 78095307 78095306 78095415 109 CAACAGATAGATATTGTGAATGGTAAAACAAACAAACAAACAACAACAACAACAAAGCCACGAGAAAAAGCATATTAC-------CTCTTTCAGTGA-TAGCTAAAGACTTGTGATT .:.....xx..x.:.x:.xx.x:x...............................x:xx..x..x...---.....x.-------:.....:...x.-....x....x::.x..:.. 68M3I7M7D12M1D19M 78/106 73.6% 109/94230402 0.0% 11/106 10.4% -75070471 -19159931 +3417 chr4 + 190214555 3024848 3024847 3024904 57 ACTCCGTCTCAAAAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAAA chr4 + 94230402 29430291 29430290 29430345 29430291 29430290 29430345 55 ACTATGTTTCAGGAAACAAACAAACAAACAACAACAACAACA--AAATCCACTGAAA ...x:..:...::.............................--...x...x.:... 42M2D13M 47/55 85.5% 55/94230402 0.0% 2/55 3.6% -26405443 -67824959 +3186 chr4 + 190214555 3024854 3024853 3024906 53 TCTCAAAAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAAATA chr4 + 94230402 76741959 76741958 76742011 76741959 76741958 76742011 53 TCTTACCAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACA ...:.xx...............x..:................xx..:x...:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -73717105 -20513297 +3258 chr4 + 190214555 3024859 3024858 3024917 59 AAAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAAATATTTCTTTGCAG chr4 + 94230402 45240844 45240843 45240900 45240844 45240843 45240900 57 AAAAACAAACAAACAAACAACAACAACAACCAGAAACCC--TAAAAGATTTTATGTCAG ..............................x.x...x..--.....x....:x.xx... 39M2D18M 49/57 86.0% 57/94230402 0.0% 2/57 3.5% -42215985 -52014417 +3196 chr4 + 190214555 3025147 3025146 3025213 67 TGTAGTCCCAGCTACTTGAGGGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:............::.......x.xx:x...x.:........::.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -73008064 -21222338 +3200 chr4 + 190214555 3037018 3037017 3037092 75 AAGGAGAAGGGCATGGCCTCAGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATGTGTGTGT chr4 + 94230402 3414907 3414906 3414981 3414907 3414906 3414981 75 AGGAGGGATGAGATGGGCTGAAAATGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGT .:.::.:.x.:x....x..x.::.x.......:x.:......::.....x..........::::xx..:...... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -377889 -93852513 +3532 chr4 + 190214555 3039080 3039079 3039158 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCGTGAACCCAGGAGGTGGAGGGTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:...........::........x.xx.x...x.:.x.........:..x.xx:..x..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -72994121 -21236281 +3249 chr4 + 190214555 3047180 3047179 3047240 61 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.........:.::........x.xx.x...xx:.x.......:.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -72986024 -21244378 +3296 chr4 + 190214555 3052866 3052865 3052956 91 TGCGCCTATAGTCCCAGCTATTTGGGAGGCTGAGGCAGAAGAATCGCTTTAACCCAGGAGGCGGAGGTTGCAGTGAACTGAGATGGTGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:.x.:....:.......:...::........x.xx:x...x.:...x.......:..x:xx:..:..:..------:.x...:..... 73M6D12M 59/85 69.4% 85/94230402 0.0% 6/85 7.1% -72980339 -21250063 +3007 chr4 + 190214555 3070277 3070276 3070327 51 CTTATTTCTCTCTCGCTCTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTG chr4 + 94230402 38525378 38525377 38525428 38525378 38525377 38525428 51 CTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTG ...x...:......x....:.:...........::....x:.:...:.:.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -35455101 -58775301 +3502 chr4 + 190214555 3084559 3084558 3084632 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAACTGCTTGAACCCGAGGGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x...x::.........::::.x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -72948645 -21281757 +3905 chr4 + 190214555 3090976 3090975 3091054 79 GTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTACAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--......:...........::........x.xx.x...x::...........:..x.x::..:..::. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -72942225 -21288177 +3097 chr4 + 190214555 3093896 3093895 3093934 39 TTTAAGTTGGTTTTTTTTTTTTTTTTTTTTTTTTAGTAT chr4 + 94230402 2231907 2231906 2231945 2231907 2231906 2231945 39 TTTAGGTTGGTTTTCTTTTTTTTTCTTTTTTTTTGGTAT ....:.........:.........:.........:.... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 861989 NA +3269 chr4 + 190214555 3097501 3097500 3097574 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -72935703 -21294699 +3111 chr4 + 190214555 3109207 3109206 3109285 79 CTTTCATGTTTCTTTCTTTCTTTCTTTTTTTTTCTTTGA-----GATGGAGTTTTGCTCTTGTTG--CCAAGGCTGGAGTGCAATG chr4 + 94230402 82923138 82923137 82923221 82923138 82923137 82923221 84 CCTCCATTTTTCTTTCTTTCTTTCTTATTTTTTCTTTGAGGCTTGATGAA--TTAGTTCCTGTGGGCCCATTTCTGCAGTGCTGTG .:.:...x..................x............-----....:.--..x.:..:...x.--...xxx...x.....x:.. 39M5I6M2D13M2I19M 62/77 80.5% 84/94230402 0.0% 9/77 11.7% -79813931 -14416471 +3696 chr4 + 190214555 3151030 3151029 3151116 87 CTCTGTCTCAAAAACAAAACAAAACAAAAAAAAAAAAAACCAGGCTGCACAGGAAG-AAGTGAGCAAGCATTACCATCTG----AGCTCTAT chr4 + 94230402 6760476 6760475 6760567 6760476 6760475 6760567 92 CTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAAGCAAGCAAAAAAACATCACCAGTTAAAACAGCTCTAT ....x.......................x.......xxx...::x::.:x..:...-...::.:x..:...:....x:.:----........ 56M1I23M4I8M 65/87 74.7% 92/94230402 0.0% 5/87 5.7% -3609446 -90620956 +3152 chr4 + 190214555 3176001 3176000 3176049 49 TTGTTTTTTTTGTTGTTGTTGTTTGTTTTTTTTTGTTTTTTTTTTGAGA chr4 + 94230402 90203142 90203141 90203190 90203142 90203141 90203190 49 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATTAAGA ..x.....x................x........x.....x.x..:... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% -87027141 -7203261 +3096 chr4 + 190214555 3176004 3176003 3176048 45 TTTTTTTTGTTGTTGTTGTTTGTTTTTTTTTGTTTTTTTTTTGAG chr4 + 94230402 77610507 77610506 77610550 77610507 77610506 77610550 44 TTTTTTTTGTTGTTGTTGTTTGTTTTTTGTT-TTTTTCATTTGAG ............................x..-.....:x...... 31M1D13M 41/44 93.2% 44/94230402 0.0% 1/44 2.3% -74434503 -19795899 +3115 chr4 + 190214555 3178749 3178748 3178794 46 CTTCACTTGATCTTAGCCAAAAGGCCAAGAAGCGATGCAACACTAA chr4 + 94230402 37937487 37937486 37937532 37937487 37937486 37937532 46 CTACACTTGATCTTAGCCAAAAGGACGAGAAGCAATGGAATAATAA ..x.....................x.:......:...x..:.x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -34758738 -59471664 +3401 chr4 + 190214555 3190223 3190222 3190289 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGCTCAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x:xx.x.:.x.x.....:.:...:..:.:x:.....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -72842988 -21387414 +3252 chr4 + 190214555 3198169 3198168 3198255 87 TCTGTTTTT--------ACCTGTTTTAGGACCCTTTCACTTTGGGGATGTGTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTT-----GAGATAGAGTCT chr4 + 94230402 56311830 56311829 56311924 56311830 56311829 56311924 95 TTTGTTTTTCCTTGCTGATCTATTTTGAAGTCC-----CTTTGGACATATGCTGATTTCTTCTGTTCTTTTTTTTTTTTTTTTCTGAGGAAATGTAGTCT .:.......--------.:..:....:::::..-----......:x..:..:......:..:.x..:................-----..:..:x..... 9M8I16M5D45M5I12M 63/82 76.8% 95/94230402 0.0% 18/82 22.0% -53113661 -41116741 +3266 chr4 + 190214555 3211772 3211771 3211989 218 AGAGTAGAATTTTCTT-----AAAAATATTTTTGATGGTATACCAATTTGTATTTTCTCAGAAACATTTGCCTTATTCTTTTTTCTGTTGTGTTTTTCTTACCTGATTGAAAGCTCATAATCTGTTGTTATTGTTTGTTAACCTTTAATGCTCTGATTTCAGGAGTTCAACCTAAGCCTGCTA-GCTCCATGCTTAAGCCTAGGGATGAGTGAAATTTCTGGTG chr4 + 94230402 35434625 35434624 35434820 35434625 35434624 35434820 196 AAAGTAGTATTTTTTTCATGTAGAAATCTGCTTTAT-----------TTGTGTTTTTCTTAAGTTATCTGTTCTACAATTTCTTTGGTTATGTTTTCATAATTTAAACAAAAGTCTGAGTTCTGTGGTTTCTCTTTGTTAACAGTTTTTTCTGTGATGCCAGAA---------AAATCTGCCACAGGCCATGTTTGTGCC-----ATGAGCT---TTCCTGGTG .:.....x.....:..-----.:....x.x:..x..-----------....:....:::x:.:x:..:..:::..:xx...:..:x...:......:x.x.::.:.x::....::::x:x.....x...x:.x.........xx..xx.x..x....x:...:.---------..::....:.-:xx.....:..:x...-----.....:x---..:...... 16M5I15M11D117M9D10M1I16M5D7M3D9M 121/190 63.7% 196/94230402 0.0% 34/190 17.9% -32222853 -62007549 +3096 chr4 + 190214555 3216885 3216884 3216954 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -72816312 -21414090 +3716 chr4 + 190214555 3258904 3258903 3258986 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -72774293 -21456109 +3416 chr4 + 190214555 3259916 3259915 3259987 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::..........xx.x...xx:.x.........:..x.xx:.x:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -72773290 -21457112 +3148 chr4 + 190214555 3277817 3277816 3277903 87 TCAAAAATCAAATAAAAACAATTTTAGATTTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGT chr4 + 94230402 66166415 66166414 66166501 66166415 66166414 66166501 87 TCAGAAACAGAAGCCAAATAGTACTTAATTTAGGCTGTTTATGCTTTTTTTTTTTTTTTTTTTCCCCCTTCTAAAGCAGAATATTGT ...:...:x:..xxx...:.:.x:.x:.....xx:x....x.x:...................:::::..:.:.::....:.x.... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% -62888598 -31341804 +3105 chr4 + 190214555 3277827 3277826 3277886 60 AATAAAAACAATTTTAGATTTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34387704 34387703 34387763 34387704 34387703 34387763 60 AATAAAAATAGGTTATAATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTT ........:.:x..xx:.......:x.:.x:...x:.......:....:........... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -31109877 -63120525 +3255 chr4 + 190214555 3284384 3284383 3284453 70 CATGGTGGCAGGTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--.::.x......:.......:...::........x.xx.x...x..........::.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -72748813 -21481589 +3117 chr4 + 190214555 3336984 3336983 3337048 65 AAACTGTGAAGTAGAAAAAAAAATGAAGAAAAAGAAAAATTAAAAAATGAGCAAAGGACTTGAAT chr4 + 94230402 41136185 41136184 41136249 41136185 41136184 41136249 65 AAACTAACAACCAGGAAAAAAAAAAGAAAAAAAGAAACTTGGAAACAAAAGCAAAGGACTTGAAT .....:xx..x:..:........x::.:.........xx.x:...x.x:................ 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -37799201 -56431201 +3173 chr4 + 190214555 3350545 3350544 3350624 80 GATGGTACACA--------CCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGAAGGATCACTGGAGCCCAGGAGGTTGAAGCCACAG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:......--------.x......:.........::.:........x:xx:x.:.x....x..:.....:..x..x::..:::.. 11M8I69M 56/80 70.0% 88/94230402 0.0% 8/80 10.0% -72682645 -21547757 +3052 chr4 + 190214555 3355778 3355777 3355838 61 AAGTGAGACCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAGAAGAAAAAGAAAT chr4 + 94230402 54130150 54130149 54130210 54130150 54130149 54130210 61 AACTGAGATTTAGTCTAGAAAAAGAAAAGAAAAAAAAAATGGGTGGAGAAGATACAGAAAT ..x.....::.x....x:.....:....:..........x.::x::......x.x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -50774372 -43456030 +3085 chr4 + 190214555 3358920 3358919 3358977 58 TCCCCCCCTCCTCCTCCCCTTCCTCCCCCTCCCCTTCTTCCTCCTCCTCCCCTCCTCC chr4 + 94230402 86523032 86523031 86523089 86523032 86523031 86523089 58 TTCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCC .:...:::..::....:..x...:.:.......:..::......:.xx....:.:... 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% -83164112 -11066290 +3025 chr4 + 190214555 3359008 3359007 3359093 86 TTCCTCCTCCTCCCCTCCCCCTCTTCCTCCTCCTCCCCTCCTCCCTCCTCCCCTCCCCCTCCCCCTCTTCCTCCACCTCCCCTCCT chr4 + 94230402 11126206 11126205 11126291 11126206 11126205 11126291 86 TTCCTCCTACTCTTCTCCCCTTCGTCCCCATCCTCCTCCGGCTGCCCCTGCTCTGCAGTGCTCCCCTTGCCCCCTGCCTTCCTCCT ........x...::......:..x...:.x......:.:xx::x.:...x.:..x.xx:x.:...::.x..:..xx.:::...... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% -7767198 -86463204 +6012 chr4 + 190214555 3359022 3359021 3359434 413 CTCCCCCTCTTCCTCCTCC--TCCCCTCCTCCCTCCTCCCCTCCCCCTCCCCCTCTTCCTCC-----------ACCTCCCCTCCTCCCTCTCCTCCTCACCTCCCCCTCTTCCTCC-TCCTCCCCTCCTCCCT------CCCCTCCCCTCCCCCTCCCATCCCCCCTCCTCCTCCCTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCCTTCTCCCCCTCCTCCTCC--------CCTTCTCCCCCTCTTCCTCCTCCCCTTCCCC------TCCACCTCCTCCTCTCCCTC-ACCCTCCTCCCTCTCCTCTCCCTCCTCCCCTTCTCTTCCCCCTCCCCCTCCTCCCCCTTCTTTCC--TCCTCCCCGTTCC-----CCACCTCCTCCTTCTCCCCCTCCCCTTCCTCCTCCCCCTCCCCCTCCTCCCCCTTCTCCTCCCCCTTCTCTTCCTCCT chr4 + 94230402 2378523 2378522 2378976 2378523 2378522 2378976 454 CCCACCCTGGTTCTCCGCCAGTGCTTGTCTCCATGCCACCATCCCCAGCCCATTCCATCTGCGTGTTTGGAGCACCATCCCTGGCCATCTCCGTGGCCACATCCTTATGTCCCACTGTCCCCATCTCCTGCCTGTGGCCCCCATCCTCTGACAGCCCCATCCCCACAGTCCCCATCCCCTGCCACCCTGTGCCCATATCCCCGTGACCCGCTGCCCCCATTCCCATGGCCAGGTCCTCATGCCCCTTGTCCCCATTCCCTGCCATCCGATGCCCACATCCTTGTGCCCCACTGCCCCCATCCCCTTCCACACTCACGCCCCATTCTCTGCCACCTCCATGCCCACATCCTCCCGTCCCATTGTCCCTGTTCCCAGCGCCACAACCCCGTGCCTCCTCCCCACTACTGCGTCTCGCTAACCC-CATCCTCATGCCCCTCACCCCACTCTGTCCCCT .:.x....xx.:....x..--.x.::x:....x.x.:x..x.....xx...x:..:x:..x.-----------...x:....xx:.x::::.x.xx:...x...::x.x.:..x.:-...:.x:.....x...------...x...:..xx.xx:.........x.xx::..:x:.:...x..x.:.:x:x...x:x...:.x.xx..:x..x....:x:...:x:--------...:x.x.....:x...:.x.:....x..x:------:....x....:x.x:...x.-:...:.x....::...x.x.:.x.x:...x......x..x.....x:x:..x.x:...:.:x...--.:x....:.....-----....xx..:.x.x.::..:.:..x..x.:x.x..:.x..xx...-.x...:.x.x.:....x...:x....x:.:... 19M2I41M11I43M1I16M6I87M8I31M6I20M1I65M2I13M5I44M1D33M 249/412 60.4% 454/94230402 0.0% 43/412 10.4% 980499 NA +3205 chr4 + 190214555 3359140 3359139 3359229 90 TCCCCTCCCCTCCCCCTCCCATCCCCCCTCCTCCTCCCTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCCTTCTCCCCCTCCTCCTCCCC chr4 + 94230402 93138994 93138993 93139083 93138994 93138993 93139083 90 TTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC .::.:.x..x.::....x.:x.:.....x.....:....x:.:..xxx.:x:::.::..x..:.:xxx..:.....:............. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% -89779854 -4450548 +3001 chr4 + 190214555 3359168 3359167 3359218 51 TCCTCCTCCCTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCCTTCTCCCCC chr4 + 94230402 7218325 7218324 7218375 7218325 7218324 7218375 51 TTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCC .::..:.::x....::...:........:........:...x.....::.. 51M 37/51 72.5% 51/94230402 0.0% 0/51 0.0% -3859157 -90371245 +3020 chr4 + 190214555 3379008 3379007 3379057 50 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGAGAGAGA chr4 + 94230402 87420509 87420508 87420558 87420509 87420508 87420558 50 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGA .:...........:.:........:.x:x.x.....:.:.x......... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -84041501 -10188901 +3240 chr4 + 190214555 3379020 3379019 3379124 105 TGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGAGAGAGAATGAGAATAGCATATTCTGCCTTAAAGGAACTCCTGCCATTTGCA----ACAACATGGATGAAGC-CAAACA chr4 + 94230402 32478347 32478346 32478453 32478347 32478346 32478453 107 TGTATGTGCGTGTGTGTGTGTGTATTTTTAGGGACAGAGCGTAAACATCAAGTGTGATCTTAAAGAA---CTTGTAAGTTGTATTAGAAGACTTACATGAAACTCAAACA ...:....:..............:.x.....:..x...::.x:..:.x..x:.x:x::.......:.---.:..:x.x...:.----.x:..x.:x.....:.-...... 67M3D13M4I16M1I6M 71/102 69.6% 107/94230402 0.0% 8/102 7.8% -29099327 -65131075 +3091 chr4 + 190214555 3386692 3386691 3386774 83 GTCTGAGGAGTGCACCCACCCGCCTGCCTGTGTCTGACAAGTTAAAACGTGTTTTTGCTCTTCCCTTGTTGTATAACCAGCTT chr4 + 94230402 11069202 11069201 11069282 11069202 11069201 11069282 81 GTCTGATCATTGCATTCCCCAGCCTGCCTGGGCCTGCTAGGTTAAATCACTTTTTCTCTTTTTTCTTTTTTTTTAA--AGCTT ......xx.x....::.x..x.........x.:...x:.:......x.::x....:x..:..::...x..x.x...--..... 76M2D5M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -7682510 -86547892 +3150 chr4 + 190214555 3427600 3427599 3427678 79 GTGGCACATGCCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGATGCGGGGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:........x..::........x.xx.x...x::...........:.xx:xx...:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -72605601 -21624801 +3485 chr4 + 190214555 3442005 3442004 3442090 86 GGGCGCTGGGCCTGG-------GTCCCCAGCCCCTGGCCCCCACCGG--GGCTGGGCC--CCTTCCTCCTCCTCCTCCTGCTGCTGCTGCTGCTGCC chr4 + 94230402 45974617 45974616 45974713 45974617 45974616 45974713 97 ggGGGCCGCGCATGGCGAAAGCGCCCTCTGCCTGCGGCTCCGAGCGGCGGGAGGGGCCGCCCTTCCTCCTCCTCCTCCCTCTCCTGCTGCTGCCGCC ...x..:.x..x...-------.:..:.x...:x:...:..x.x...--..xx.....--..................:x..x..........:... 15M7I25M2I9M2I37M 67/86 77.9% 97/94230402 0.0% 11/86 12.8% -42532612 -51697790 +5109 chr4 + 190214555 3449235 3449234 3449381 147 AGGGGGACTCAGGGGGGCCCCTGGCCTGC---GAGAAGAACGGCGTGGCTTACCTCTACGGCATCATCAGCTGGGGTGACGGCTGCGGGCGGCTCCACAAGCCGGGGGTCTACACCCGCGTGGCCAACTATGTGGACTGGATCAACGACC chr4 + 94230402 59706353 59706352 59706502 59706353 59706352 59706502 150 AAGGTGATTCAGGAGGTCCCCTGGTTTGCTTTGATGCAGAAAATGTGGCTTATGTCTGGGGTGTTGTGAGTTGGGGTGAAAACTGTGGGGAGGCCGGTCACCCCGGCGTCTACACACAAGTAGCCAGCTATTACGACTGGATTAGCCACC .:..x..:.....:..x.......::...---..x:x::.x:::........:x...:x..::.::.x..:........x::...:...x:.x:.x::x.x..x..x........x.:x..:....:....xxx........:.:.x... 29M3I118M 95/147 64.6% 150/94230402 0.0% 3/147 2.0% -56257118 -37973284 +3084 chr4 + 190214555 3450820 3450819 3450901 82 TCTTTCCTTCCTTTTCTTCCTTCCTTTCTTCTTCTTTCTCTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTCTTCTTTCTT chr4 + 94230402 76521921 76521920 76522002 76521921 76521920 76522002 82 TCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTT ..:..:...:..:::....:.x....x...x.....xx..........::.x:..:.x..:.x:..x.:x:...:::.x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -73071101 -21159301 +3036 chr4 + 190214555 3450850 3450849 3450892 43 CTTCTTTCTCTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTC chr4 + 94230402 52530885 52530884 52530927 52530885 52530884 52530927 43 CTTCTTTCCTCCTCCCCCCTTCTCTCTTTTTTTTTTTTTCTTC ........:::...:.:::.............:.......... 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% -49080035 -45150367 +4278 chr4 + 190214555 3468356 3468355 3468501 146 GTGTGCGTGTGTCTGTGTGTGCAAGTGT-GTGCCGGTGTCTGCATGGGCATGCAGCAGTGTGTGTGCCTGTG--TGAATGTACATGTACGAGTGTG----TGCCTGTGTGTGCATGTATGTGTGCCTCTGTGTACATGTATGAGTGTGCATGT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTG------TGTGTGCATGCAGATGTGTGCACAT ...x.x.....xx.:..x.::..:xx.:-....x.....x:x........:...x.x.......:..xx...--..x.:::....x....x..:..----...x.........:::x.:...------.....:....:.x:x.......::. 28M1I43M2I22M4I22M6D25M 98/140 70.0% 147/94230402 0.0% 13/140 9.3% -1745819 -92484583 +3049 chr4 + 190214555 3480479 3480478 3480550 72 GTGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGTGGGAAAATCACTTGAACCTGGGAGTTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........:x.:........x:xx.x:..x..........::.:..:.xx:..:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -72552727 -21677675 +3284 chr4 + 190214555 3504607 3504606 3504692 86 CACTGTGGTGGTAGGGGCCTGTAATCCCAGCTACTTGCGAGGCTGAGGCAGGAGAATTTCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......x-----:.x....:.:...........x:........x.xx.x...x:x...........:..x.xx:..:..:.. 11M5D70M 59/81 72.8% 81/94230402 0.0% 5/81 6.2% -72528590 -21701812 +3004 chr4 + 190214555 3518812 3518811 3518857 46 GGGGTGGGGGGCAGGAGGGGGTGGGGCAGAGGGCAGGAGGGGGTGG chr4 + 94230402 23981646 23981645 23981691 23981646 23981645 23981691 46 GGGGGGGGGGGGAGGAGGGGCAGGGATAGGGGGCAGAAGGGAGTGG ....x......x........xx...::..:......:....:.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -20462834 -73767568 +3059 chr4 + 190214555 3537710 3537709 3537745 36 AAAACAAAAAACAAATTTAAAAAAAAAAAAAAAGAA chr4 + 94230402 76296640 76296639 76296675 76296640 76296639 76296675 36 AAAACAAGAAACAAACTTAAAAAAAAAAAAAAAGAA .......:.......:.................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -72758930 -21471472 +3143 chr4 + 190214555 3539731 3539730 3539792 62 AGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGGAGAGGGAGAGGA chr4 + 94230402 41164195 41164194 41164256 41164195 41164194 41164256 62 AGACTTTGTGAAGAGAGGAAGGGTGAAGGGGAGGAGGGAAGGGTAGTGGGGGAAGAAGAAAA ....:x..x.:....:.::....x..:..:.........::..x..x...:..:.:...::. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -37624464 -56605938 +3123 chr4 + 190214555 3574262 3574261 3574339 78 TGACAGAGCAAGACTCCATCTCAGAAAAAAAAACAAAACAAAAAACAAAAAACAAA--AAAAAAAAACAAAAAAAAACCA chr4 + 94230402 49333021 49333020 49333098 49333021 49333020 49333098 78 TGTCTGAGAAGGACTTGATATCAGAAAGATAAACAAAAC--AAAACAAAGAACAGATCAGAGGCAAATAAAATAAAAACA ..x.x...x.:....:x..x.......:.x.........--........:....:.--.:.::x...:....x....x.. 39M2D15M2I22M 58/76 76.3% 78/94230402 0.0% 4/76 5.3% -45758759 -48471643 +3156 chr4 + 190214555 3584893 3584892 3584964 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAAACTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.x......x.::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -72448313 -21782089 +3055 chr4 + 190214555 3591795 3591794 3591861 67 ATATGTGTATATATATATATGTGTATATATATATATATATATATATATATATATATATATACATACA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...::...:..:..:.:....x.:.:..:.x:..:...:.x......:......:xxx...:..... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -42471504 -51758898 +3395 chr4 + 190214555 3593908 3593907 3594021 114 GGTGTGTGTGTCTGTG--TGTGGTGTGTGTCTCTGTGTGTGTGTCTCTGTGTGTGTGTATGTGTGTGTGTGTTCATG-TGTTTGTCTATGTGTGGTGTGTGTTTGTGTGTGTGTTTG chr4 + 94230402 11846431 11846430 11846546 11846431 11846430 11846546 116 GATGGGTGTATCTTTGACTGAAGTATGTGCAGTTACTGGTACGATTCAGTGTGTTTTTAAGTGGTCTTGTGTTTAGGAGGTCTGTCT-TGTGTTGTGTGTGTGTGTGTGTGTACTTG .:..x....:...x..--..x:..:....:xx:.::xx..::.x:..x......x.x..x...xx:x......:.x.-x..:.....-.....x........x.........::... 16M2I59M1I9M1D29M 78/113 69.0% 116/94230402 0.0% 4/113 3.5% -8252523 -85977879 +3116 chr4 + 190214555 3599605 3599604 3599675 71 GTGTGTAAGCAGGTGTGCATATGTCTGTGAGCAGGTGTGCATGTGTGTGGGGGCAGGTGTGCACATGTGTA chr4 + 94230402 39131747 39131746 39131817 39131747 39131746 39131817 71 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x....x...:.....:x.:.x......x.:.:............x.:.:x...xx.:.x..:..:.::. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -35532142 -58698260 +3132 chr4 + 190214555 3617220 3617219 3617267 48 CCCTCCCTCTCTTCTTTTCTTCCTCCCTCCCTTCCCCTCCCCTCCCTC chr4 + 94230402 49829861 49829860 49829908 49829861 49829860 49829908 48 CCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC ..x.::..:....:........:.:...:.::.....:.......... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% -46212641 -48017761 +3166 chr4 + 190214555 3617629 3617628 3617688 60 TCCCCTCCCTCCTTTCTTCCCTCCCATCCCTCCCTTCTCCTCCCTTCCCTCCCTTCTCCC chr4 + 94230402 1610702 1610701 1610761 1610702 1610701 1610761 60 TCCCCTCCCTCCTCCCATCCCTCCTCTCGTTCCCTCCGTCCCCATCCCGTCCCTATTCCC .............::.x.......:x..x:.....:.x:.:..x.:..x.....x:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 2006927 NA +3097 chr4 + 190214555 3621399 3621398 3621471 73 TGCACCTGTCGTCCCAGCTGCTCAGGAGGCTGAGATGGGAGGATCTCTTGAGCCCAGGAGTCCAAGGCTGAAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...x..:......:..::::........x:xx.x.:.x.x.....:.....:..:::x:.....x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -72411806 -21818596 +3058 chr4 + 190214555 3641548 3641547 3641587 40 TCACACACACACACACAAAAAAAAAAAAAAAAAAAAAGAG chr4 + 94230402 39686917 39686916 39686956 39686917 39686916 39686956 40 TCACACACACACACACAAAAAAGAAAAAAAATAGAATGAG ......................:........x.:..x... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -36045369 -58185033 +3205 chr4 + 190214555 3641548 3641547 3641592 45 TCACACACACACACACAAAAAAAAAAA----AAAAAAAAAAGAGCGAGA chr4 + 94230402 55927861 55927860 55927909 55927861 55927860 55927909 49 TCACACACACACACACAAAAAAAAAAAACACAAAAAAAAAAGACCAAAA ...........................----............x.:.:. 27M4I18M 42/45 93.3% 49/94230402 0.0% 4/45 8.9% -52286313 -41944089 +3013 chr4 + 190214555 3641549 3641548 3641583 35 CACACACACACACACAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 77830098 77830097 77830132 77830098 77830097 77830132 35 CACACACACACACACAAAAAAAAAAGGAAAAAAAA .........................::........ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -74188549 -20041853 +3013 chr4 + 190214555 3641549 3641548 3641583 35 CACACACACACACACAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 70425778 70425777 70425812 70425778 70425777 70425812 35 CACACACGCACACACAAAAAAAAAGAAAAAAAAAA .......:................:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -66784229 -27446173 +3013 chr4 + 190214555 3641549 3641548 3641583 35 CACACACACACACACAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 39719039 39719038 39719073 39719039 39719038 39719073 35 CACACACGCACACACAAAAAAAAAAAAAGAAAAAA .......:....................:...... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -36077490 -58152912 +3089 chr4 + 190214555 3641562 3641561 3641600 39 ACAAAAAAAAAAAAAAAAAAAAAGAGCGAGAGAGAGAAA chr4 + 94230402 75300453 75300452 75300491 75300453 75300452 75300491 39 ACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..x..................:....x............ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -71658891 -22571511 +3099 chr4 + 190214555 3641571 3641570 3641608 38 AAAAAAAAAAAAAAGAGCGAGAGAGAGAAAAGAAAGTC chr4 + 94230402 7875213 7875212 7875250 7875213 7875212 7875250 38 AAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAGGTC .................x...........:....:... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -4233642 -89996760 +3028 chr4 + 190214555 3652769 3652768 3652834 66 GTGCGTGTGTGTGCATGTGTGTGCTTGTACGCGTGTGCGTGTGTGCATGTGTGTGCTTATGTGCAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ...:...................x:....::::::.:.::.......:::.::x:.x...x..::. 66M 43/66 65.2% 66/94230402 0.0% 0/66 0.0% -75612750 -18617652 +3570 chr4 + 190214555 3675017 3675016 3675110 94 CTCCCCTCCTCCCTTTCTCCTTCCCTCTCTCCCTCCCTCCCTTCCTCCCTCCCTTCTTTCTCCCTCCCTCCCTCCCTCCTTTTCTCCCTCCTTC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..::x..::.:..::.......:.....:...........x:x..:x::....:.:x:.:::.:x..:.::...x:..:.x.:x.....:..:. 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% -50089518 -44140884 +3089 chr4 + 190214555 3682201 3682200 3682247 47 CAAAAAAACAAACAACAACAAAAAAAACCACACACACACACAAAAAA chr4 + 94230402 57620658 57620657 57620704 57620658 57620657 57620704 47 CAAAAAAAAAAAAAGCAATACAAAAAAACCCACACACACACAAAAAA ........x...x.:...:.x......x.x................. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -53938457 -40291945 +3109 chr4 + 190214555 3685962 3685961 3686022 61 CACACGTGTGCACACATATGCACACACACACATGCACACACACTCATGCACACACATACAC chr4 + 94230402 54963201 54963200 54963261 54963201 54963200 54963261 61 CATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ..:..:x:.......x...::...........xx...:::.:.:...:......:x..:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -51277239 -42953163 +3370 chr4 + 190214555 3726049 3726048 3726133 85 GGGAGGGAGGGAGGGAGAGAGACAGGGTGGGAGATGAGAGAGGGAGGGAGGGAGGGAGAGAGACAGGGTGGGAGATGAGAGAGGG chr4 + 94230402 644758 644757 644842 644758 644757 644842 85 GGAGGTGACAGGGAGGGAAAGTCATGATGGAGGCAGAAATGGGGGGAGAGGTAGAGAAAAGAGCAGAGAAGGAGATGGGAGAGGG ..::.x..x:.:.:.:..:..x..x.:...::.xx..:.x:...:.:....x..:..:.::::...:.x:.......:....... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 3081291 NA +3373 chr4 + 190214555 3726365 3726364 3726475 111 GAAGGGAGGGAAGGAGAGAGAGAGAGGGAGAGGAGAGAGGAAGGGAGGGAGGGAGAGGGAGAGGAGAGAGAGAGGAAGGGAGGG------AGAGAGAGAGGGAGAGGAGAGAGAGGA chr4 + 94230402 11213971 11213970 11214087 11213971 11213970 11214087 117 GAAAGAAAGGGAGCAGAAAGCTAAGTGGGAAGAGGTGGATGAGAGGGCAAAGAAGAGGAAGAGTAGAAAGAGAGGAGAGATGAGTACTGCAGAGAGTGAAGCAGAGCCCAAGGAAGA ...:.:.:..:..x...:..xx.::x..::..::.x.::x:..:.:.x:.:.:.....:....x...:........::.:x.:.------......x..:.x....xxx.::..:.. 84M6I27M 68/111 61.3% 117/94230402 0.0% 6/111 5.4% -7487606 -86742796 +3819 chr4 + 190214555 3766397 3766396 3767806 1410 GGCAGCTGCGGGGAGCCCGGCA--GCCACGCTCTCCGGCGCGCCGCCCGCGGAGCCACCACGGCCGAGGGCCGGCTGCTGGGCGCCGCGGTCCCCGGCGGGCGCGCCCGAGCAGCAGGCGGCGA-----------------TGCGGGCGCCGACCCCGGCTGGGGGG----------CGCCCGAGCTGCCGCGGCTGCGCCCCGGCTCCAG------GAGGGACGGCGTAGCTCG---CGGGAGGAC----------CATGGCGTCCCCGGCGCTGGCGGCGGCGCTGG-----------CGGTGGC-------------GGCAGCGGCGGGCCCCAATGCGAGCGGCGCGGGCGAGAGGGGCAGCGGCGGGGTTGCCAAT--GCCTCGGGGGCT---------------TCCTGGGGGC-----CGCCGCGCGGCCAGTACTCGGCGGGCGCGGTGGCAGGGCTGGCTGCCGTGGT------GGGCTTCCTCATCGTCTTCACCGTGGTGGGCAACGTGCTGGTGGTGATCGCCGTGCTGACCAGCCGGGCGCTGCGCGC-GCCACAGAACCTCTTCCTGGTGTCGCTGGCCTCGGCCGACATCCTGGTGGCCACGCTGGTCATGCCCTTCTCGTTGGCCAACGAGCTCATGGCCTACTGGTACTTCGGGCAGGTGTGGTGCGGCGTGTACCTGGCGCTCGATGTGCTGTTTTGCACCTCGTCGATCGTGCATCTGTGTGCCATCAGCCTGGACCGCTACTGGTCGGTGACGCAGGCCGTCGAGTACAACCTGAAGCG-CACACCACGCCGC-----------GTCAAGGCCACCATCGTGGCCGTGTGGCTCATCTCGGCCGTCATCTCCTTC---CCGCCGCTGGTCTCGCT----CTACCGCCAGCCCGACGGCGCCGCCTACCCGCAGTGCGGCCTCAACGACGAGACCTGGTACATCCTGTCCTCCTGCATCGGCTCCTTCTTCGCGCCCTGCCTCATCATGGGCCTGGTCTACGCGCGCATCTACCGAGTGGCCAAGCTGCGCACGCGCACGCTCAGCGAGAAGCGCGCCCCCGTGGGCCCCGACGGTGCGTCCCCGACTACCGAAAACGGGCTGGGCGCGGCGGCAGGCGCAGGCGAGAACGGGCACTGCGCGCCCCCGCCCGCCGACGTGGAGCCGGACGAGAGCAGCGCAGCGGCCGAGAGGCGGCGGCGCCGGGGCGCGTTGCGGCGGGGCGGGCGGCGGCGAGCGGGCGCGGAGGGGGGCGCGGGCGGTGCGGACGGGCAGGGGGCGGGGCCGGGGGCGGCTGAGTCGGGGGCGCTGACCGCCTCCAGGTCCCCGGGGCCCGGTGGCCGCCTGTCGCGCGCCAGCTCGCGCTCCGTCGAGTTCTTCCTGTCGCGCCGGCGCCGGGCGCGCAGCAGCGTGTGCCGCCGCAAGGTGGCCCAGGCGCGCGAGAAGCGCTTCACCTTTGTGCTGGCTGTGGTCATGGGCGTGTTCGTGCTCTGCTGGTTCCCCTTCTTCTTC chr4 + 94230402 91676985 91676984 91678217 91676985 91676984 91678217 1233 GGCAGCGG-GGGGGCCCCGTCCTCGCTGCCCCCCCCGGTGGGACGGCGGCGGGGCCGTCGCGG--GGAGGC--------GGGCACCGCAATCC------GGCGTGA------AGAGGGCTGGGAGATCACTCCATCCCTACTCCGTCCCTCCATCCCGGCTCGGGGGAGGCAGACCTTGCCCCAGTTTTTGGGGGTGAGGTGCTGAGCGAGTCGTGGAGGGGGCTGCGAGGATCATGCCGGGGGGGCTGCGCCTCGGCATCGCTTTCTCGTCGCCCTCCATGGAGCCTGGACTTTTTTTACGATGACTTTCCCTGAGCTGAGCAATGGCAG-CTTGAGTGAGAACAGGACGGGACAG---GGCAGCCAGAGCGGTGCCAACCGGTCCTGGGGGTTGCAAGGCGAGGAGTCCCCCGAAGGCAACGGCACCACGCTGCCATT-CGCCTTGGACGTGCAGGCGG---TGGGCGTCGGGGTCTTCTTGGCTGTCTTCATCCTCTCGGCCATCGTGGGCAACATCCTCGTCATCCTGTCGGTGGCTTGCAACCGGCACCTGCAGACAGTCACC-AACTACTTCATCGTCAACCTGGCCATCGCCGACCTGCTGCTCAGCACCACCGTGCTGCCCTTCTCGGCCACCTTGGAGGTGTTGGGTTTTTGGGTTTTTGGCCGCATCTTCTGCAACATCTGGGCAGCGGTGGATGTGCTGTGCTGCTCCGCCTCCATCATGAGCTTGTGCATCATCTCCGTGGACAGGTAT--ATCGG----------CGTCAAGTATTCCCTCAAGTATCCCACCATCATGACAGAGAGGAAGGCTGGGGTCATCCTGGTGGTGGTCTGGCTCTCCTCCATGGTCATCTCCATTGGGCCGCTGCTGGGGTGGAAGGAACCACCGCCA-CCAGATGAGAGCATCT---------GTAGCATCACTGAGGAGCCAGGCTATGCCCTGTTCTCTTCCCTTTTCTCCTTTTACCTGCCCCTCATGGTCATCCTGGTGATGTACTTCAGGATCTACGTGGTGGCCAGG-------------------------AG--------------------------------GACAACC---------CGGAGCTTGGAGGCGGGGGTCAAGAAGGAGAGGAATAA---------ATCCATGGAGGTGGTGCTG-----------CGCATC--------------------------CACTGCCGCAG--------------------------------------------------------------------------TGTGCTGGAGGAGC---CTCTCTCCAGCACCCAGAG------------------------CAAAGGGCACAACTTCAGGAGCTCCCTCTC------------------------CGTGCGGCTCCTCAAGTTCTCCC--GTGAGAAAAAAGCA----GCCAAGACTCTTGCCATCGTTGTGGGCGTCTTCATCCTCTGTTGGTTCCCCTTCTTCTTC ......x.-....:x....x.x--..::.x.:.:....:.x.x..x.x....:...::.:...--.::...--------....:....::...------....:.x------..x:...x.x..-----------------.x..xx.x:.x.:.......x.....----------:....x..:.x::.x..x..x.x:x.x.xx.x..------::...:.x...x:.x..:---....:..:.----------...x..x.:.:..x...:xx.x::..x..:x.-----------..:..:.-------------:...::...:.-.::x.:..x..:.:.x:....xx..---......x:x:.x.x......:--.:.::.....:.---------------:..:.::...-----.:..:...x....x.-.x.xx:..:..:.xx...:.---...x:.:..x...------..x:x..:.....x...:x:..:.x.........:.x..x..x:.xx.xx.x...x:xxx..:....xxx....:x:.-.:...x-...:x....x.x..xxxx......x:x......x.x...x.x:x...xx:x..xx...........x:x:..xxx...x.xx...x:.x:...xx:..:..x.:x:.x.xx...::.:.x.:xx::...x.x..........x:...x..x.x..x...:..x:::....:::....xx.x.....x.x..:--:....----------....:....:xx...x...::-.x.....:xx:.x-----------.::::..:..:.x.x....:x..x......x:...x::x.........x.:---....:.....xx.x.xx----.:.......-..x..:.:x:x.::..---------.::..x...x:..x...x.xx.x..:::.....:...:.x.x.:xx......:.x.x:....:x.x.x:....xxxxx..:.x...x:xx.x......xx:.......:.-------------------------..--------------------------------...x...---------.x.:..x:..x...:..x.:x::x:..:.x:..x.:x:---------::..::x..x....x..:.-----------....x.--------------------------.::...x..:.--------------------------------------------------------------------------..x.::..:..x..---.:x:......xx...x.:.------------------------..:xxx..:.xx.x..::.xx..:...x..------------------------....:.x.x..x....x.xx...--.:.x.x:.:....:----:..xxx::x..x..::.x..::.......x...:.x.....:.................. 8M1D13M2I39M2D6M8D14M6D7M6D12M17I26M10I34M6I18M3I9M10I32M11I7M13I11M1D25M3D21M2I12M15I10M5I15M1D20M3D13M6I78M1I6M1D192M2D5M10D21M1I13M11I51M3I17M4I9M1D16M9D110M25D2M32D7M9D38M9D19M11D6M26D11M74D14M3D19M24D30M24D23M2D14M4D60M 690/1113 62.0% 1233/94230402 0.0% 417/1113 37.5% -87910588 -6319814 +3528 chr4 + 190214555 3766955 3766954 3767068 114 TGGTACTTCGGGCAGGTGTGGTGCGGCGTGTACCTGGCGCTCGATGTGCTGTTTTGCACCTCGTCGATCGTGCATCTGTGTGCCATCAGCCTGGACCGCTACTGGTCGGTGACG chr4 + 94230402 89301236 89301235 89301349 89301236 89301235 89301349 114 TGGTTGTTTGGGAAGCTGTTCTGCAAGGTCTGGATCTCCTTTGATGTCATGTTCTGCACCGCTTCCATTGTCACTCTGTGCTTTATCAGCTTGGACAGATACTGCTCTGTGGTG ....xx..:...x..x...xx...::x..x.:xx.xx.x:.:.....xx....:......x.x..x..:..xxx......:x::......:.....x.x.....x..x...::. 114M 74/114 64.9% 114/94230402 0.0% 0/114 0.0% -85534281 -8696121 +3134 chr4 + 190214555 3917123 3917122 3917195 73 AGGAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAAGGAGAGAGGGACGGAGGGAGGGAAATAAAGAGAGAGA chr4 + 94230402 42772549 42772548 42772615 42772549 42772548 42772615 67 AGGGAAAAAGAAAGGAAGAGATGGAGTGTGGTAGGGGGAGAAAGAGATGGATGG------ATACAGAAAGAGA ...:.:........:......x:...x.x.:x..::.....:..:..:...x..------...x...:..... 54M6D13M 50/67 74.6% 67/94230402 0.0% 6/67 9.0% -38855426 -55374976 +3411 chr4 + 190214555 3917123 3917122 3917238 116 AGGAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAAGGAGA----------------GAGGGACGGAGGGAGGGAAATAAAGAGAGAGAAGGAGAAAAAG------AAAAAAGAAAGAAAGAGAAAGAGGGAGAGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ..:.....::.:xx.x...............:....:x...----------------.:::x........x.:..:.x...:.::..:......::.x..------:..:x.x:...:...:..:x.x.xx:.:.... 41M16I43M6I32M 77/116 66.4% 138/94230402 0.0% 22/116 19.0% -47231256 -46999146 +3169 chr4 + 190214555 3917337 3917336 3917394 58 GAGAGAGAGAGAAAGGGAGGGAGGGGGGAGAAAGGGAGGGAGGGAGGGGGGGAGGAAG chr4 + 94230402 26216017 26216016 26216074 26216017 26216016 26216074 58 GAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ..:...:...:....::..x.:..:...::...:.:...x:........:.:...x.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -22298680 -71931722 +3513 chr4 + 190214555 3919094 3919093 3919226 133 ATCTCAAAAATATACATATATATATGTGTATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATA--TATACACACATATATATACACACATATATATACATATATATACACAC chr4 + 94230402 21109170 21109169 21109302 21109170 21109169 21109302 133 ATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATA--TGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....x.......x:x.x..x.::x.:.::..:.:.:.x.x....x.:....x....--....:x:.:......x.::::..x:...--...::..x...::x.x.::::.:..:.:...:x....::..:..... 56M2D28M2I47M 81/131 61.8% 133/94230402 0.0% 4/131 3.1% -17190076 -77040326 +3603 chr4 + 190214555 3919095 3919094 3919207 113 TCTCAAAAATATACATATATATATGTGTATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATATATACACACATATATATACACACATATA chr4 + 94230402 46140795 46140794 46140906 46140795 46140794 46140906 112 TTTTACAGATATGTGTGCATTCAAATGTATTGCAATAAATGTTACACTATTATTTTGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .:.:.x.:....:::.::..x:.x:.....xxxx...x....xxxxx...xxx.x......-................x.x..:...:......:.:........x..x..:. 61M1D51M 76/112 67.9% 112/94230402 0.0% 1/112 0.9% -42221700 -52008702 +3170 chr4 + 190214555 3919151 3919150 3919222 72 GTGTATATATATATACACACACACACATATATACACACATATATATACACACATATATATACATATATATAC chr4 + 94230402 54963190 54963189 54963261 54963190 54963189 54963261 72 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ..x.:.....x:.....x.::.....x............:.:.xx:..:::.::x:...:...:..x..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -51044039 -43186363 +3027 chr4 + 190214555 3919161 3919160 3919216 56 ATATACACACACACACATATATACACACATATATATACACACATATATATACATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:..............:x.:.:.....x........::.:....:...x:.x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -70606913 -23623489 +3629 chr4 + 190214555 3919214 3919213 3919367 154 TATATATACACACACACAGTGGTTATATATAAATATATATATATATACCAGTGTGTGTGTATATATAT----ATATATATCACAGTGTGTGTGTGATATATATATATATACACACACACACACACACACACACACACACACACACACACAGTGGTTAA chr4 + 94230402 46140768 46140767 46140914 46140768 46140767 46140914 147 TGTATCTAGTCTCTCACAGTGGT-----ACAGTTTTACAGATAT------GTGTGCATTCAAATGTATTGCAATAAATGTTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAA .:...x..xx.x.x.........-----.:.:x.x..:.x....------.....::.x:.x..:...----...x..:.:...x.:.xxx.x..xxxx.........:......x.x....:........::::.:.:...x..x:....x:..:.. 23M5D16M6D18M4I86M 96/143 67.1% 147/94230402 0.0% 15/143 10.5% -42221554 -52008848 +3002 chr4 + 190214555 3919215 3919214 3919279 65 ATATATACACACACACAGTGGTTATATATAAATATATATATATATACCAGTGTGTGTGTATATAT chr4 + 94230402 33416725 33416724 33416789 33416725 33416724 33416789 65 ATGGATACACACAGACACTGGATATACATATATATATATCTGTATACACATGTCTGCACGTATGT ..:x.........x...x...x....:...x........x.:.....xx:...x..::::...:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -29497510 -64732892 +3851 chr4 + 190214555 3919241 3919240 3919361 121 TATAAATATATATATATATACCAGTGTGTGTGTATATATATATATATATC-----ACAGTGTGTGTGTGATATATATATATATACACACACACACACACACACACACACACACACACACACACAGT chr4 + 94230402 27702297 27702296 27702418 27702297 27702296 27702418 122 TAGGAATATACATATATTCCCAAGTGTGTGTGTATATATATATATATTCCTAGAAATTGATCTTAAGTAatatatatatatatata-atatatactgatata---atatatatatacagatataat ..x:......:......x:x.x.........................x:.-----.:x.xx:x.:x..:...............:.-.:.:.:..xx.:.:.---.:.:.:.:.:...x.:.:.:. 50M5I31M1D15M3D21M 82/117 70.1% 122/94230402 0.0% 9/117 7.7% -23783056 -70447346 +3157 chr4 + 190214555 3919302 3919301 3919361 60 GTGATATATATATATATACACACACACACACACACACACACACACACACACACACACAGT chr4 + 94230402 66743625 66743624 66743684 66743625 66743624 66743684 60 GTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCAGT ...x.x....x...x.....:x:....x...x..x:..................xx.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -62824323 -31406079 +3166 chr4 + 190214555 3943995 3943994 3944039 45 AAAAAAAAAACACCA--AAAAAAACAAAACAAAACAAACAAACAAAA chr4 + 94230402 69716321 69716320 69716367 69716321 69716320 69716367 47 AAAAAAAAAACACCCTCAAAAAAAAAAAGCAAAACAAACAAACAAAA ..............x--.......x...:.................. 15M2I30M 42/45 93.3% 47/94230402 0.0% 2/45 4.4% -65772326 -28458076 +3036 chr4 + 190214555 3943997 3943996 3944048 52 AAAAAAAACACCAAAAAAAACAAAACAAAACAAACAAACAAAAACACACACA chr4 + 94230402 66833167 66833166 66833218 66833167 66833166 66833218 52 AAGAAAGCCAGTAACAAAAACAAAGCAAAACAAGCAAATAACAACAAACACA ..:...:x..x:..x.........:........:....:..x....x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -62889170 -31341232 +3116 chr4 + 190214555 3968069 3968068 3968155 87 ACACATGTACATGTATATATATATGCATATATATACATACATATATACATATACATGTATATATGTGTATATATACACATACATATA chr4 + 94230402 22600182 22600181 22600268 22600182 22600181 22600268 87 ACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...x.x:.x..x.x.x.:.:.:..::x:.:..::.x.:....::.....x.x.:........x.....:.:....::...:..::.. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% -18632113 -75598289 +3027 chr4 + 190214555 3987562 3987561 3987629 68 GTTTTTGTGTGTGTGTTTGTGTGTGCCCTTTTTTTTTTT-TTTTGGTTTAGTTTTGTCTTTGTGTTTTT chr4 + 94230402 41434322 41434321 41434389 41434322 41434321 41434389 68 GTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCTTTT-CCTTTATATTTTT ..x.............x.......x::..:.:.......-..x.x....xx....-:....:.:..... 39M1I15M1D13M 53/67 79.1% 68/94230402 0.0% 2/67 3.0% -37446760 -56783642 +3030 chr4 + 190214555 3997906 3997905 3997954 49 GATTTCCCATTCAACATCAATCTTATTTCCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79275860 79275859 79275908 79275860 79275859 79275908 49 GATTTCACACTAAGCATAAAAATGATTTCCTTTTTTTTTTTTTTTTTTT ......x..:.x.:...x..xx.x......................... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -75277954 -18952448 +3323 chr4 + 190214555 4021809 4021808 4021891 83 CGTGGTGGTATATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....::.:..--...:.:...........::........x.xx.x...x::.........:.:..x:xx:..:...:. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -72011388 -22219014 +4139 chr4 + 190214555 4022327 4022326 4022400 74 GTGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGTGGGAGGATCACTTGTGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:............:........x:xx.x.:.x......x:.....:..x..x:.....:.. 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% -72010877 -22219525 +3179 chr4 + 190214555 4068567 4068566 4068637 71 TCTCAAAAAGAAAAAAAATATGTATATATATGTGTATATATGTATACATATACGTATAT-----ATGTATATACGT chr4 + 94230402 85548415 85548414 85548490 85548415 85548414 85548490 76 TCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ...:x....:........x.xx.....:.......:.::..::...:.....:x.....-----...x....x.:. 59M5I12M 53/71 74.6% 76/94230402 0.0% 5/71 7.0% -81479848 -12750554 +3007 chr4 + 190214555 4068658 4068657 4068713 56 ATATATATGTATATATGTATATATACACCTATATATGTATATATGTATATATACAC chr4 + 94230402 61270779 61270778 61270834 61270779 61270778 61270834 56 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACAC ......x................::...x..:.:.x::.:x:.......x:..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -57202121 -37028281 +3387 chr4 + 190214555 4068662 4068661 4068790 129 ATATGTATATATGTATATATACACCTATATATGTATATATGTATATATACACGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACG chr4 + 94230402 21109179 21109178 21109303 21109179 21109178 21109303 125 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGT----GTATGAATATGCATGCACACG ...x.x.x..x..:x....:.:::x.:.x.x...:x:::.:.x.....::..x:.:......x...:..:x..:......:..:x:..::x.x:::......:.----....:x..:.::..::..... 104M4D21M 75/125 60.0% 125/94230402 0.0% 4/125 3.2% -17040517 -77189885 +3075 chr4 + 190214555 4068687 4068686 4068734 48 TATATATGTATATATGTATATATACACGTATATATACACGTATATATA chr4 + 94230402 61270780 61270779 61270827 61270780 61270779 61270827 48 TATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA .....x................::......:.:.x....x:..:.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -57202093 -37028309 +3293 chr4 + 190214555 4068691 4068690 4068796 106 TATGTATATATGTATATATACACGTAT--ATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...::..:.:...x.x.:.:x:.....--....::..x:.:......x...:..:x.:..::...::..x:..::x.x:::......:.....:x...::.:.::.:. 27M2I79M 64/106 60.4% 108/94230402 0.0% 2/106 1.9% -17040503 -77189899 +3281 chr4 + 190214555 4068719 4068718 4068828 110 TATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTC--ACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x.x:::.x:::...x.....:...x.--.:......x...:..:x.:..::...::..x:..::x.x:::......:.....:x...::.:.::.:. 39M2D69M 65/108 60.2% 108/94230402 0.0% 2/108 1.9% -17040475 -77189927 +3281 chr4 + 190214555 4068751 4068750 4068860 110 TATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTC--ACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x.x:::.x:::...x.....:...x.--.:......x...:..:x.:..::...::..x:..::x.x:::......:.....:x...::.:.::.:. 39M2D69M 65/108 60.2% 108/94230402 0.0% 2/108 1.9% -17040443 -77189959 +3281 chr4 + 190214555 4068783 4068782 4068892 110 TATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTC--ACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x.x:::.x:::...x.....:...x.--.:......x...:..:x.:..::...::..x:..::x.x:::......:.....:x...::.:.::.:. 39M2D69M 65/108 60.2% 108/94230402 0.0% 2/108 1.9% -17040411 -77189991 +3412 chr4 + 190214555 4068815 4068814 4068924 110 TATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTC--ACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x.x:::.x:::...x.....:...x.--.:......x...:..:x.:..::...::..x:..::x.x:::......:.....:x...::.:..:.:. 39M2D69M 66/108 61.1% 108/94230402 0.0% 2/108 1.9% -17040379 -77190023 +3290 chr4 + 190214555 4068847 4068846 4068956 110 TATACACGTATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTGTATATACACGTATATATGTATATATACACGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTC--ACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x.x:::.x:::...x.....:...x.--.:......x...:..:x.:..::...::..x::.::x.x:::......:.....:x...::.:..:.:. 39M2D69M 65/108 60.2% 108/94230402 0.0% 2/108 1.9% -17040347 -77190055 +3025 chr4 + 190214555 4071346 4071345 4071380 35 TTGTTTTTTTGTTTTGTTTTGGTTTTTGTTTTTTT chr4 + 94230402 72938554 72938553 72938588 72938554 72938553 72938588 35 TTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT .....................x............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -68867208 -25363194 +3040 chr4 + 190214555 4078717 4078716 4078772 56 GAGCAAAACTTTGTCTCAAAAAAACAAACAAACAAACAACAAACAAAAACAGAAAA chr4 + 94230402 48363371 48363370 48363426 48363371 48363370 48363426 56 GAACAAAATGCTGTAACAAAAAAAAAACCACACAAACAAAAAACAACAACAAAAAA ..:.....:x:...xx........x..x..x........x......x....:.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -44284654 -49945748 +3856 chr4 + 190214555 4089893 4089892 4089966 74 GTGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCACCTGAGCCCAGAAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..:...:.........:.::........x:xx.x.:.x...:...:........x.:x:.....:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -71943311 -22287091 +3172 chr4 + 190214555 4101808 4101807 4101877 70 CATGGTGGCATGCACCTGCATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x..:.x.:...........::........x.xx.x...x::........::.:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -71931389 -22299013 +3038 chr4 + 190214555 4125035 4125034 4125111 77 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTGAGGCATGAAATATGTGTAATTCTGTGCCTGGCTT chr4 + 94230402 22790718 22790717 22790794 22790718 22790717 22790794 77 CAAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAGCCTGAAATAGATAAGAAAATGTACCTGGATT ........x......x...x........xxx.x.......xx:.:..x.......x:.:x:.xxx...:.....x.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -18665683 -75564719 +3209 chr4 + 190214555 4138764 4138763 4138846 83 CGTGGTGGTAGGCGCCTGTAATCTCAGCTACTTGGAAGCCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGTGCAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....--..:.x....:.::..........:...x.....x:xx.x...x.:........::.:..x.x::..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -71894433 -22335969 +3012 chr4 + 190214555 4154318 4154317 4154372 55 ATCTCAAAACAAACAAACAAAAAAAAAAAACAAAACAAAAAACCAGCATGATTTC chr4 + 94230402 39457977 39457976 39458031 39457977 39457976 39458031 55 ATTTAAAAACAAAGAAACAAAAAAAAAAACCCAAACCAAAACCCAACAAAACCTC ..:.x........x...............x.x....x....x...:..x:.::.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -35303659 -58926743 +3066 chr4 + 190214555 4176093 4176092 4176165 73 TGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATGGCTTGAACCTGGGAGGCAGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::........x.xx.x...xx:........::.:..x:xx:....::.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -71857112 -22373290 +3027 chr4 + 190214555 4178961 4178960 4179034 74 TGCAGCCTGTGTCAGAAGTGCCTGTCTGGTTTT----TCGGGGGTTTTTTTGTTTGTTTGTTTGTTTGATTTTGTTTT chr4 + 94230402 81099498 81099497 81099572 81099498 81099497 81099572 75 TGCAAACTATGGCTGCAG---ATGTCAAGTTTTGGTTTTGGGGGGTTTTTTGTTTGTTTTTCTGTTTTGTTTTGTTTT ....:x..:..x.x.x..---x....x:.....----.:.....x..............x.:.....x:......... 18M3D12M4I41M 56/71 78.9% 75/94230402 0.0% 7/71 9.9% -76920537 -17309865 +12607 chr4 + 190214555 4188803 4188802 4188995 193 CTATATCTTACAATAGACCTCAAAGAGGGAGGCAGCTGCGTGCATTCGATAGAAAATAGAAAAAGGCATGGCCAGGTTGACCACAATTATCCAGGGTTCAAAGCCAAAGACAATCTCCTCCAATCCATTGTCATACTCAGGTCGACAGCCAAAGGCGGGAGGTATCCAAAGCTGCAAGAGAAGAGAAAATGGC chr4 + 94230402 81464882 81464881 81465074 81464882 81464881 81465074 193 CTATGTTTTGCAATTGACTTCAAAGAGTGAGGCAGCTGAATGCATCCGATAGAAAATAGAAAAAGGCATCGCAAGGTTCACAACAATTATCCAAGGTTCAAAGCCAAAAACGATTTCTTCCAGCCCATTGTCGTATTCTGGGCGGCACCCAAATGCCGGTGGTATCCAAAGCTGCAAGGGAAGAAGGCAAGGC ....:.:..:....x...:........x..........x:.....:.......................x..x.....x..x...........:..............:..:..:..:....::........:..:..x..x..:..x.....x..x..x..................:.....:::x.x... 193M 158/193 81.9% 193/94230402 0.0% 0/193 0.0% -77276079 -16954323 +35184 chr4 + 190214555 4197162 4197161 4198121 960 TTACCGAAATATTGCAGAGGAACAAGAAGGCTGCAATATTCCTCAGGACTTTTCTCTTGGCGTTG----------CCCTGTAAGAAACGGGGAA------GGCGGACTG--GGCTTGGGCTCCCTCCCCAGCTGCTCTCCTC-CTGCTTCTCCTCCTCCTTGTCATGGCTTTCTCTCATGCACACATTTCCATTGGCTGCTGGTGGCATGTCCT---TGCCCTGGGGAGCCACATCTCTGGCCAC-----ACCTCCACTCTTGGGGCAGGAAGAAGCAAGGGGCATGGTGTTGCCATTGCAGACTGTGACCACCCGAAGGGTTTGGATGTCCTCAGAGAGTTTTTCAGGCTCTCGGTGAATGGATTCAAAGATGAAGAGGTTCTGGATGTACTTCTCCACGATCGCCAGGATGGAGTAGGGCAGGTTGTACCAGGTGTAGCGGGGGTGGCCCTCAGCACAGAGGATGGCCAAGATTGAGCCCCAGGAGATAAGCCAGGAGCCCGAGGCAGTGCCCACCAAGAGGTCCGAGTCCAGTTTGCGGGCCGGATTTTTGGACTCATCCAGTGACTTCTCGTCTATCCTGTAAATCCGGATTCCAGCCAGCCCCGCAGCCCCCATAAGCATCAGCAGGGTGATGGCATACAGGTAGAACATGATGAGTGCCGACTCGCTCTTGGTCTTGGAGCGCCCAATATGAATCAGGTATACCACCACCACAGCAATGGTGGCGGCCAGCACGGTCAGGCCCAGGACTGCGCCCACCATGACCCCATCAGACTTGAACTGCATCTTCTGGTGCTGATGGCTGTCAACTTTGCGCCCGATGTTCTTCCACAGGACGTAGAGCATTGTGGAGGCCAGGATCTGATACTCTATGTTGAAGGGGTAGAGGTAGTAGATCCCGTGGGAGATGGCAGTGCACAGAGTTGGGGGCGTGCAGTTACACTGCGGTGTGTGGTCATCTAAAACTAGGGGAGACAGGTAGA chr4 + 94230402 81465425 81465424 81466393 81465425 81465424 81466393 969 TTACCGAAAGATTGCAGAGGAATAAAAACGCAGCAATGTTCTTGAGAATTCTCCTCTTGTTGTCAGCCACCGAGCTCCTGCTGCAGAGGGAGAACTCAGAGGCAAAATGCATGTCTGAACCATTTCCCTGACGTGTCAATTCACTGTCACCACTGCTC----TCATCGCGTTCTCTGGCACAGATGCTGCCATGGAACAGGCATGGCAACTCCCCAGTGTCCTGGGCAGCA-------TGGCCATTGTAAATCTCCTT-------GTACGAGGGTGTAAGTGTCAGAGTGCTCCCTCGAGACACTGTCACTATTCGAAGGGTTTTAACATCATCATTCATCTTTTCCTGCTCACGATGTATGGATTCAATGATAAAGAGGTTCTGAATGTATTTCTCAATTATGACCAGGATGGAATAGGGCAGGTTATACCAGGTGTATTTGGGGTGAGCCTGAGCACAGATAATTGCTAGGATGGAGCCCCAGGAGAGGAGCCAGGACCCGGCAGCTGTGCCGACCAGCAGCTCTGCATCCAGTTTTCGAGCAGGATTTTTGGAGTTGTCCAGTGACCTATCCTCCAGTCTGTAAATCAGTAGGGCGATTACTCCAGCTGTGCACATGAGAGCCAGCACGAAGATTGCATGGAGGTAAAACATTGTCAGTGCTAACTCGCTTTTGATTTTCGAACGTCCAATCTGAATTAAATATACCACAACGATTGCTATTGTGCTAGTTAACACAGTTAGTCCAAAAATCATCCCAACGGTGATGCCATGGAATTTGAATGGAGTTTTGTGTTGCTGATGGTGTTCTACTTTGCGGCCAATGTTCTTCCACAGGACATAGAGCATTGTGGATGCTAGAATGTGGTATTCTATATTAAAGGGGTACAGGTAATATATTCCTTGAGAAAATATTGAACAGAGAGTTGTTGTTGTACAATTGCATTGAGGGGCATGGTCATCTAAAACTAAAGGAAAGGGAGAGA .........x............:..:..x..x.....:...:.x..:.:.:.:......x:..::----------:....:x:x.:.x..:...------...::.x..--x.::..::.:x::....:::.xxx..xx:..-...::x.:x..x...----....x..x......x:::..x.:::.x....x.:x::xxx:.....xx...:---..:......x...x-------......:-----.:....x:-------.:.x..:.:x.:...x.x..x:...:.x..x:x:x.x.....x..:.::..........x:.::..x...xxx.x:.....xx....x..:..x..........x...:...........:.....:.....x.:x..x:..........:...........:...........x:x......:x...x........x:..x..:.:...x.............x:........x..x.x:..x.....x....:x..x..:.x:........x..:..x...........x.::.........:.x..x..:.x:.........x.x.xxx.::::.x:..x..x.:x.x...:..x::.....x.:x...x....:x.....:.....x:.x.....::.......:...:.:..x..:..:.....x.....:.::........x..x.:x..x..x...x::.::.:...:..:..x..x.::.::::x..x..x:...:x....x::.:.....:x.x:.:..x..x.........:xx..x........x..:.................:..............x..:..:..x..:..:.....:..:........x.....:..x..:..x..:..:.xx::x.x:..x.......xx.x:..:..:..:..:..x..x.::................::...:.x:.:x... 65M10I19M6I9M2I31M1I15M4D52M3I14M7D7M5I8M7D722M 645/942 68.5% 969/94230402 0.0% 45/942 4.8% -77268263 -16962139 +3139 chr4 + 190214555 4199192 4199191 4199255 64 ATATAATTTAAAAAAAACTCAGGTAAAATTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA chr4 + 94230402 42888273 42888272 42888336 42888273 42888272 42888336 64 ACAGATTTTGAAATAGGATATGGTGAGTTTGATTGTGTGTGTGAGAGAGAGAGAGAGACAGAGA .:.x.x...:...x.::x.xx...:.:x...xx.........................x..... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -38689081 -55541321 +3444 chr4 + 190214555 4201298 4201297 4201369 72 GCACCTGTAGTCCCAGCTACTCAAGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::.:.:......x.xx.x...x..........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -71831908 -22398494 +3138 chr4 + 190214555 4201431 4201430 4201488 58 AAAATAAATAAAATAGAATAAATAAATAAATATATATATATACACACACACACACACA chr4 + 94230402 54005667 54005666 54005724 54005667 54005666 54005724 58 AGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACA .:...x..:...x..x.x.:..:.x...x:...x..........:............. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -49804236 -44426166 +8642 chr4 + 190214555 4202443 4202442 4202588 146 CTCACCTGTTGTTATGTTCCCAAAACCCAGAGTGATGAGCCGTTCCTTGTGCTCATTGAGTTGGTGCTTTGACTCATTGAGGACGCCATTGGCCCACAGAAGCAGGTTGGTGAACACCGAGTGGATCACTCCAAACCTGAAAAACA chr4 + 94230402 81467603 81467602 81467748 81467603 81467602 81467748 146 CTTACCTATTGTTATGTTCCCAAAACCAAGTGTGATTAGTCTTTCCTTATGTTCATTCAGTTGATGCTTTGACTCTGTTAACACTCCATTTGTCCACAAGAGTAAATTTGTGAACACAGAATGGATAACCCCAAACCTACAAAACA ..:....:...................x..x.....x..:.x......:..:.....x.....:...........xx.x.:x..x.....x.:.....::..:.::..x........x..:.....x..:........:x...... 146M 115/146 78.8% 146/94230402 0.0% 0/146 0.0% -77265160 -16965242 +6114 chr4 + 190214555 4206067 4206066 4206151 85 TTTACCTTTCCAGTGTTTTGAAAGACTGGATAATATCCTTTGCATGCCCCCAAAGAAAATATACCTAGATG---GAAATAAAGAAAGA chr4 + 94230402 81469504 81469503 81469591 81469504 81469503 81469591 88 TTTACCTTTCAAGTGTTTTGAAAGACTGGATAATATCCTTTGCATGACACCAGAGAAAGTATACCTAAGTGAATGAAATAAAGAGAAA ..........x...................................x.x...:.....:........::..---..........:.:. 71M3I14M 76/85 89.4% 88/94230402 0.0% 3/85 3.5% -77263437 -16966965 +3154 chr4 + 190214555 4218263 4218262 4218334 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx::x.......:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -71814943 -22415459 +3429 chr4 + 190214555 4218800 4218799 4218889 90 GCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGATTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:..........:::........x.xx.x...x.:........::.:..x:xx:.::..:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% -71814406 -22415996 +3182 chr4 + 190214555 4219778 4219777 4219860 83 TATGCACATATATATGTATAAATATATATACGTGTATATATGTATACATATGTGTATACATATATATACACATATACATGTAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x..:x.:.:.x...:.:x:.:.:.:.:::.xx..:..x.:..........:x......:.x...:....:.....:::.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -81614755 -12615647 +3089 chr4 + 190214555 4219905 4219904 4219990 86 ATATGTGTGTATATACGTATACATGTATACATATATACACATATATACGTATACATGTATACATATATACACATATATACGTATAT chr4 + 94230402 59886579 59886578 59886664 59886579 59886578 59886664 86 ATGTGTGTGTATTTAGGCATACTTGCCTTGGTATGCACGTGTGTACACTGAGACATGCATATTTGTTCACATAAGCGTACGTATAT ..:.........x..x.:....x..:x.xx:...::..:::.:..:..xx.x.....:...:x.:.x:...:.x:::......... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -55666674 -38563728 +3258 chr4 + 190214555 4219948 4219947 4220019 72 TATACGTATACATGTATACATATATACACATATATACGTATATAGGTGTATATACATATATATGTATATACA chr4 + 94230402 56867291 56867290 56867361 56867291 56867290 56867361 71 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACA .....:...-::...:.:x...:...........:..xx.....xx...::..::.....:.x....:.... 9M1D62M 52/71 73.2% 71/94230402 0.0% 1/71 1.4% -52647343 -41583059 +3775 chr4 + 190214555 4223772 4223771 4223845 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGTGGAGGTCGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.xx.x...x.............:.:x.xx:..::.:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -71809432 -22420970 +3331 chr4 + 190214555 4224218 4224217 4224289 72 GCGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x.:..:.:...........::........x.xx.x...x.::........:.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -71808988 -22421414 +4587 chr4 + 190214555 4224361 4224360 4224497 137 AAGAAGGAAAGGCAGAGAGGAGGGAAGGCGAGGGAATAGGGAGGGA-GGGAGGAGGAAGAAAGGAAAGG-AGAAGGAGGGAAGGAAGAAGGGAGAAAAAAGGATGGAGGAGAGAAAGAAGGAACAAAAAAGGGGCTTTG chr4 + 94230402 2055455 2055454 2055593 2055455 2055454 2055593 139 AAGGAGGGGAGGGAGAGCAGCGGGGATGCGAAGGCAGACACACGCACAGGAGGAGGAGGAGACAAAATACACATGGAGAGAAGGAGGGGGGGAGAAAAAAGGGAGGGGGCTGGAAGGCAAGCGCACAAAAGGCACCCTG ...:...::...x....x:.x...:.x....:..x.x.x:x.x.x.-:.........:..:.x:...x:-.x.x....:......:.::.............:x..:..xx:...:.x.:.x:..x......x:.::.. 46M1I22M1I69M 91/137 66.4% 139/94230402 0.0% 2/137 1.5% 2168906 NA +12350 chr4 + 190214555 4226443 4226442 4226918 476 GCCCGGCGCC------------TGGACTCACCGCGCAGCCAGCCGGCACCCGCGTGCGTGTCCTTGAGGCGGAAGAGGCGGCGGTGCGCGGAGCTGCGGCCCACGTACCACAGCATCCACAGCAGCTGCAGCAGCATGAGCGCCGTCAGGAAGCACAGCAGGTCGCTCTTGCTCACGCCCGCGGCGTGCACGGCCCAGGCCAGCAGCAGCAGCAGCCCCGCCACGAACACGATCAGCCCATACTGGCTGCTCAGCATCTCGGCCAGTTTCTGTGGGACGCTGGCGCGCACACCGCCCCGCCGGGGG------GCCGGGGATTCCGGGGACCTCGGGGCCGAGGACGAGGGAGGCGAGCAGGCCGCTGGCCCCGACGACCCT---GCGACCG-AGGC---GCTTGCAGCTGCCC--GGGGCGAGGCGGGCGACCCCAGGCCCTCGAGCATCTTCGAGACACCCGCGCCAAGTCTGGTCCCG----GGGGTGGCTGCCGTCGGGCCCCG chr4 + 94230402 81476460 81476459 81476940 81476460 81476459 81476940 481 GCCCGGTGCCACCTGTGTGCCACGTACTTACACTTCAGCCAGCGGGCTCCAGCATGCGTGTCCTTGTCCCGGATCAGCCTCCTCTGCGTGCAGCTCCTGCACAGGTACCACAGCATCCACAGCAGCTGAACGAGCATCAGCGTGATGAGGTAGGAGAGCAGGTGGCTCTTGCTGATACCCACGGCGTGTACAGCCCAGGCGAAGGTGAGCAGCAGCCCGGCCAAGAACAGGTTGATGCCGTACTGGCTGCTGAGGATCTCGGCGTTTTTCTGCGGGTAGCTG----------CCTCCCGCGGAGGACCAACCGCCGGCTTTCTCCATCTCCCAGCTGCTCGCTGCG-GGCAGCCGACC---CCGCTTCCCCGGGCAGCCCTGAGGCGGCCGCAGGCCCGGCCCACAGCGGCACCGGGGGCGGAGCGG---------GGCCGTCGTCGCTCGCCGTGCCTCCCGCGGC---TGCGGGGCCGCTGAGGGGCGGCGGGCACCATGCCCCG ......:...------------:.x...:..xx:x........x...x..x..:............xxx....xx..x.xx.xx....:.x....x.x..x..x........................x.xx.....x....:x:.x...x..x.x.......x.........x.::...:.......:..:........x.:x:xx...........x....x.....x.x.x.xx..:...........x..x........xxx......:...xx....----------.x:.....x.:..:------.....xxx.::.x:xxx..:x.xx..:x:xx:..-..x..x...x.---.....xx...x.:.::....---...:...-....---..:::....x..x.--......::....---------....x...xxxx..x:..x.x.x......x.---.x:..xx...----....:...x.x.::.:x...... 10M12I260M10D14M6I34M1D11M3D20M3I7M1I4M3I14M2I12M9D31M3D10M4I23M 318/450 70.7% 481/94230402 0.0% 57/450 12.7% -77250017 -16980385 +3343 chr4 + 190214555 4229470 4229469 4229507 38 TTTTTTGTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTT chr4 + 94230402 31166935 31166934 31166972 31166935 31166934 31166972 38 TTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTT ......x............................... 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% -26937465 -67292937 +3709 chr4 + 190214555 4230009 4230008 4230069 61 GCGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....x....:.:............:........x.xx.x...x.x...........:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% -71803195 -22427207 +3237 chr4 + 190214555 4232384 4232383 4232430 47 CAAAACCTCAACTCTACAAAAAAAAAAAAAAAAAAAAAAATGCTGAG chr4 + 94230402 13485170 13485169 13485216 13485170 13485169 13485216 47 CAAAACCCAAAATCTTTAAAAAAAAAGAAAAAAAAAAAGATGCTGAG .......:x..x...x:.........:...........:........ 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -9252786 -84977616 +3452 chr4 + 190214555 4232722 4232721 4232796 75 GGCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCATTTGAGCCTGGGAGGTCCAGGTTTCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:....x......:...........::........x:xx.x.:.x..:....:..::.:..x.:::..:.x:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -71800481 -22429921 +6106 chr4 + 190214555 4237823 4237822 4237972 150 TTACCTTCGGAAATCATCCAAGGAGTGTGATAAACATGACAACCCCCATAAACTGGGTAAACAACAACAATGGAGTGAAAAACGACCACACATGCCATAAAGCAATGTTGAAGCTGAAAAGAACAAGACATAAACAGTTGACAACTCCAA chr4 + 94230402 81481929 81481928 81482077 81481929 81481928 81482077 149 TTACCTGTAAGTCTCATCCTAGGAGTGACACAAGCATCACAACACCCATGAACTGAATGAACAACACCACAGGTGTGATAAATGACCAGACTGGCCATAAGGCAACGTTAAAACTGAGAATAA-AAGAAGAAAGCTTTAGAGAAGTTCAA ......x::::xx......x.......xx.:..:...x.....x.....:.....::.:.......x..xx..x....x...:.....x..xx.......:....:...:..:....:..x..-....x:x..:.xx.x..x..x.:... 123M1D26M 106/149 71.1% 149/94230402 0.0% 1/149 0.7% -77244106 -16986296 +9294 chr4 + 190214555 4240312 4240311 4240496 185 TTAACTTACCAAATTCCTGCTGCAATAAAGGAGGCAGTGGTAATGGGTATCAAGGCTGGATACTTGACATCATATTCTCCAATTCCACAATACCATTCCAGGTAGACTATGCAGTAAAATGCAATTGATAAACTGACAAGCAACAAGGCACTGCCACAGAGAA---ACCAGCTGT----GGAGATAAAAACA chr4 + 94230402 81483080 81483079 81483271 81483080 81483079 81483271 192 TCAACTTACCAAACTGCTGCTGCAATAAAAGTGACAGTTGTGATAGGTATCAGTACAGGATACTGCACATCGTAGTCCTCAATTCCACGATACCACTCAAGATATATTATGCAGTAAAAGGCAACAGATAAACATGCAGCCAACAAACAACTGCCAGAGGCAAACCACCAACTGTAGTAGAAGGGAAAAACA .:...........:.x.............:.x.:....x..:..:.......:x:.x.......xx.....:..x..::.........:......:..x..:..x.:............x....:x.......xx:..:x......:xx.......x..:x..---....:....----.:..:x....... 163M3I9M4I13M 142/185 76.8% 192/94230402 0.0% 7/185 3.8% -77242768 -16987634 +3460 chr4 + 190214555 4244337 4244336 4244427 91 CATGGTGGTGTGCGCCTATAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAAGTCAAGGCAGCAAGCCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGAT ..::......::..--.:....:.:.........::........x:xx.x.:.x.......:..::.:.:x.:x:...x.:.::x...... 14M2D75M 59/89 66.3% 89/94230402 0.0% 2/89 2.2% -71788860 -22441542 +3087 chr4 + 190214555 4245756 4245755 4245809 54 ATATATACACACACACATGAATATATAC--ATATATACATATATATGAATATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:.:...............:...:..--........:........x..x..x.. 28M2I26M 45/54 83.3% 56/94230402 0.0% 2/54 3.7% -70280318 -23950084 +8181 chr4 + 190214555 4246196 4246195 4246350 155 TCTTACCTGCTAGTGTGGAAGTTTTCTTTAAGGGTTTTAAAGAAGTCAACATAATAGGTCACAACAATGGATGCCAAAATCCAGAATCCAGAATGGATATTAAGTCTTGGAAGAGGTTTCTCCTTTTTCTCAACAGCTGTGGAGGTTTCTGCAAA chr4 + 94230402 81484254 81484253 81484408 81484254 81484253 81484408 155 TCTTACCTATCTGCTTGAATTGTTTCTTTAATAGATTTAAAAAAATCAAAGTAATATGTCACAGCAATGGAAGCCAAAATCCAGAACGCAGAATGAACATTCAGTCTGGGAGAGGGCTTCTTTTTCTTCTCTGCAGCTGTAGACTCTTCTGTAAA ........:::x.:x..:.xxx.........x:.x......:..:....x:.....x......:.......x..............:x.......:.:...x.....x...:::..:....::..:.....x:.......:..xx:.....:... 155M 115/155 74.2% 155/94230402 0.0% 0/155 0.0% -77238058 -16992344 +3019 chr4 + 190214555 4253839 4253838 4253891 53 ATAAACTCTCCTTTATTTGTATATATGTGTGTGTGTATATATATATATATATA chr4 + 94230402 21429698 21429697 21429750 21429698 21429697 21429750 53 ATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACA ......x:.:....xxx.x...............:...........:..x.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -17175859 -77054543 +3142 chr4 + 190214555 4256594 4256593 4256671 78 TGGTGCACACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:--......:.........:x::........x.xx.x...x.:........::.:.:x:xx:..:..:.. 9M2D67M 53/76 69.7% 76/94230402 0.0% 2/76 2.6% -71776608 -22453794 +3391 chr4 + 190214555 4258987 4258986 4259093 107 GTGCCCTTGTAGTCCCAGCTACTCGGGAGTCTGAGTTACAAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGATATCATGCCACTGTACTCC---AGCCTG chr4 + 94230402 76033204 76033203 76033312 76033204 76033203 76033312 109 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ....x.x......:.........:.::..x.....::x::x...x..........::.:..x:xx:..:..:..-:.xx....::..x..x:x...::x..---...... 74M1D26M3I6M 70/106 66.0% 109/94230402 0.0% 4/106 3.8% -71774217 -22456185 +9129 chr4 + 190214555 4267869 4267868 4268636 768 ATTTTTAAATACACAAATGTTCATTTCACAAGCTTGACTTTGTCCTTTAATAACTTAAAGGTAGGGTTCTTGCTGATTTTCTTGTTAAAGATGACCAGGAGTTCCTCTTCGGATCTGTGATGCTCATCTGTCACTGTGTAGTACTGAGCTAAAACCTTCACAAAGAAAAACATCAAATGAGTGTATTTGACCTGG--AAAATTATCTTAAAATGTTCTGTCTTTAACCCAGAAATAGAACAACAGGAAAAAATAAAAGAAACCCAGGAGCAAGCGACACCGGCGTGCTCT--CCTTGGAAAACCCAGGCGGCAGCCACGTGCAGGGGTTTGGCCATGTGTGAGTCATCCTGAGAAACAAAGTGAAATAAAGGAGAAGAAACCACTGCTCTGGGATAGGCAAAAGAGAGCAAATATCTAGAAAATAATTTCCAAACAATAAAAATTAAATAAATGGAGCCTCTCTTCAAAGTCTTATAAACAAGCCCAAAATCTAGGCACCACCCTGGCTGAGGCTGTGTGGGGCTTTGGAGCAGCTTGAAAATCACTGAGACACACACACAGATT--------TTCAGTGTTTTAGGTGAAAAAA----GAAAAAAACAAACAATTGTACATTTAGAAATAAGTTCTCCCCAGCTGTTAGACACGTGGGTTTGTTCATATGCCATACCTTTTTCCTTAGCTTTTTGATGGTTATTTCATTGTCTGGGGCCTGTTTCAGAATTGCTTTAATAGTTCCCTTCCAGTTGAATTTACCTACAATATAAATAATAATAT chr4 + 94230402 81497257 81497256 81497824 81497257 81497256 81497824 568 ATTATGGAAAGTATGAAAACTTATTTCAGAAGTTTCACTTTGTCCTTTAAAACCTTGAATTTGGGATTGTTGTTCACTTTCTTATTAAATATGACTAGAATATCCTCTTCTGATTTGTGATGTTCACCAGCTACTGCATAGTACTGAGCTATAACCTGCACAAAGAA-------AGAGGAACAGCTTTGAGTTAGTAAAGATCCAGTTAAAG--------CAGTAATGCATTCATGTTACTGT-------ACTAAAAGTAGCACAGAATCTA---------TTATGCTATGCCTTTGCAGAAC-------------------------TTGCCTCTGTATT---------------------------------------CTACTG---------------------------------------AGTTCTAAAGAAC-----------------------------AAGTCT--------------AGTTCTAGTCATTCTGTCAATTGATGTTCTGCTAAGTAATG-------TCAAACATTTTTGACAGGAACA---GGATTTTACAAGCTTCAGCACTACAGGAAAAAAAAAATTGAAGACAAAAGAAGACTTAAAACCTAAAAAAAAA-----------------------------GATGGTATACTGTACCTTTTTTCTTAGTTTTTTAATTGAAATTTCATTGTCTGGAGCCTGTTTCAGAACAGCTTTGATGGTTCCTTTCCAGTTGAATTTACCTAGAAAATAATTAAGCATGT ...x.x:..x::.::..x::.:......x...:..x..............x.x...:..xx.:..:..x...:.x.:......:.....x.....:..:.xx........x...:.......:...:.x.::....::.............x.....x.........-------.:.x..:::xx.....x:.:.--..:..:xxx.....:--------.xx...:x..xxx..:xx..x::-------.x......x.:.x...:.x.x.---------x::....x.--.:...x.:...-------------------------...x.:x...:.x---------------------------------------.:....---------------------------------------.x...:...x..:-----------------------------......--------------.:x.....x..::x:x:::::...x.:.x..:x::.:xx..-------.::..x..:x:...x.x:x...---:....--------.....:::.x:...x:......----...:.x..x.:.x:.:.xx.x.::..:...x..:-----------------------------.x.x:...:.::.........:.....:.....:..x.xx..............:.............:x.....:..:.....:...................x..x....x...xx..:. 167M7D21M2I15M8D23M7D22M9D9M2I11M25D13M39D6M39D13M29D6M14D41M7D22M3D5M8I22M4I34M29D122M 376/552 68.1% 568/94230402 0.0% 232/552 42.0% -77229388 -17001014 +3483 chr4 + 190214555 4274214 4274213 4274300 87 GCAACAGAGCAAGACTCCGTCTCAAAAAAAACAAAAAAAAAAAAAACCACACACACACG-----CACACAAAACGCTAGGTCTAACAGGCTT chr4 + 94230402 88382708 88382707 88382799 88382708 88382707 88382799 92 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACAGCTCCCAGGGGCTGACAGACCT ....x:.........xx.x.........::.x..............x..:.x.x:...:-----......:xx.x.x:..x..:....:.:. 59M5I28M 63/87 72.4% 92/94230402 0.0% 5/87 5.7% -84108494 -10121908 +3298 chr4 + 190214555 4279204 4279203 4279263 60 GTGCCTACAGTCCCAGCTACTTGGGAGGCTGAGACACGAGAATTGCTTGAACCCAGAGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .::.x.::...:...........::........x.x:.x...x::............:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -71754002 -22476400 +5685 chr4 + 190214555 4279359 4279358 4279549 191 GCCTTGACTTCCAAAAATAAGAAATTCCCATTTCATTATTACTAATTATTTTTGCCACAATGCAAATCTAAAATCAGATCTGACTTACGCTGTTGGAAGCTTCAGAAAAGATATTCCACACCTGGTCCAGAATGGATTCATTATGAACTTTTAAACTGTTCTTCATCCAATTCTGT--AAGAAAGAAAAAGAA chr4 + 94230402 81499845 81499844 81500023 81499845 81499844 81500023 179 GCTTTGATTTCTGCAGATAAA-------CATTTCTTGACTGCATTTCTGTTGTACAGTGTTGTACCTCTAA-------TTTAACTTACATCTCCAGTTGCTTCAGAAAAAATATCCCACACCTGATTCTGCAAAGTGCTGTCAGTAACTCTCAAACTGTTCTTCATCCAGTTCTGTGCAGGAAAGAAAAAGAA ..:....:...::x.:....:-------......x.x.:.:.xxx.:xx..x.:.x:::x..:.xx.....-------.:.:......:::x:::.xx...........:....:.........:.:.x.x.x:.xx:::.:.xx....:.:.................:......--.:............. 21M7D43M7D98M2I15M 119/177 67.2% 179/94230402 0.0% 16/177 9.0% -77220486 -17009916 +6481 chr4 + 190214555 4279637 4279636 4279799 163 CATACCTGAAATTTTGCCTTTTTCCTGGGAACGTTGTCAAAAGCACTAATTTGCTCTAAAAGTTCTCTCACTTTGGGGCTGACATTGGGTCTCTTTATTAATTCACTAATTTTCTACAAAAAGGGAAGAAAAAAGAAAAACTATTAATAAACAACCAACATGA chr4 + 94230402 81501237 81501236 81501394 81501237 81501236 81501394 158 CATACCTGAAATTTGACTTTTTTTCTTGGAATATTACCAAAGGAACGCATTTGCTCCAGAATGTTCCGCACTTTAGGGTTTATATTGGGTTTCTTCATCACTTCATGAATTTTCTGCATGAACAAAACCAGGATGAA-----ATCAGTGAAGAAGCGGAATGA ..............x:.:.....:..x....::..::....:.x..xx........:.:..xx.::.x......:...:.x.:.......:....:..:.x....:x........:..x:..x::..xx.::.x...-----..:.:.:..x..x.::x.... 137M5D21M 109/158 69.0% 158/94230402 0.0% 5/158 3.2% -77221600 -17008802 +7555 chr4 + 190214555 4281774 4281773 4281899 126 AGACGTTACCTGAATCCACGCCTGCTGTTTGATGTCGCCTTTGTGGGTTTTACCTTCATAGCCTTTGCCACCATACTTCTGATCTTCACTTATGCATTTCACGTGGTTTTTATAGTCATCGCCCCT chr4 + 94230402 81501871 81501870 81501996 81501871 81501870 81501996 126 AAACCTTACCTGAAGCCACTCCTGTTGTTTCGCATCTCCTTTACTAGTTTTGGCTTCAAAATCTTTTCCACCATACTTCTCATCTTCAGTTACGCACTTCACGTGGTCCTTATAGTCATCACCCCT .:..x.........x....x....:.....x:::..x.....::x:.....:x.....x.::....x.............x.......x...:...:..........::...........:..... 126M 99/126 78.6% 126/94230402 0.0% 0/126 0.0% -77220097 -17010305 +7576 chr4 + 190214555 4283616 4283615 4283742 127 CTTACCAGAAATCTTTACCGCAGTCAATGCAAGAAAGGCATTCACAGTTTCTGCAAACAGACACATGCTTTTCCACTTGTATTTTCTTCACTGATTCACCACATGCATTGCATGTAAAAAATACCAT chr4 + 94230402 81503235 81503234 81503361 81503235 81503234 81503361 127 CCTACCAGAAATCCTTCCCACAGTCCATGCAGGAGAGGCACTCACAGTGTCTGCAGATGTTCACGTGCTTTTCAACCTGTGCTTTCTTCACGGATTCCCCGCACGCGTTGCACGTGAAGACGACCAT .:...........:..x..:.....x.....:..:.....:.......x......:.::xx...:........x..:...::.........x.....x..:..:..:.....:..:..:.xx..... 127M 98/127 77.2% 127/94230402 0.0% 0/127 0.0% -77219619 -17010783 +10839 chr4 + 190214555 4299909 4299908 4300103 195 TGTGATTTTTTGCTGTAGGTCACCTGAATGGTTGAGCATGGACCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGACTGTATGTTGGTGGTAAAAGGAGTCTGCTTTAAAGCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTTAGGTGGGT chr4 + 94230402 81505125 81505124 81505318 81505125 81505124 81505318 194 TGTTTTATTTTGTTGTAGGTAATGTGACTTTCT-AGCATGGACACTGTTGCTAGCCATAGTTGTCATCTACTCCAGCAGCTACACGAGCAACGCATTCAGGGTCTTCTCTGTGACTGTATGTTGGTGGTGAAAGGTGTCTGCTTCAAAGCACACAAAAATGTGTTAGCTGCTTTTAGTCAATACTTCAGGTATGT ...xx.x.....:.......x.:x...x.xx:.-.........x.........x...:..:..:.....:........:..:..:.....:..x..:..:..:..x..:....................:.....x........:.....:..:..:.....x:.:..x..x..:..:..:..:..:....:x.. 33M1D161M 149/194 76.8% 194/94230402 0.0% 1/194 0.5% -77205216 -17025186 +49799 chr4 + 190214555 4301913 4301912 4303094 1182 ATATATGAATGTTATTTATAAGAAAAAGATGGTGTGAATTTTTGGCACTGTAAACAGATATTCTTTCTTTTACCAGGAGCCTCTTTCAGAATTCTTCAAGCCAGAAGAATGATGTTTTTCACTTGGATGTTAAAAATGTCAGTGGCATAGGGCAGATCCTGGACTTCATGTACACTTCTCATCTAGATCTTAACCAGGACAATATACAAGTAATGCTGGACACAGCACAGTGTTTGCAAGTTCAAAATGTTCTGAGTCTGTGTCACACATTTTTAAAATC------AGCCACTGTAGTACAGCCACCTGGCATGCCTTGTAATAGTACATTGTCTCTACAAAGCACCCTGACCCCAGATGCCACTTGTGTTATCAGTGAAAACTACCCCCCTCATTTACTGCAGGAATGTTCAGCAGATGCACAGCAGAACAAAACGTTGGATGAATCGCATCCGCATGCTTCACCATCAGTTAATCGTCATCACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGATACTTCAGATGGCAGCTGCACAGAACTGCCTTTCAAACAGCCAAATTACTATTACAAACTCAGAAACTTTTACAGTAAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTGTTGAGCAGCCTTTTGCTTTCAGCACCTCTACAGACCTTACCACGGTAGAGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGCCTGTGAATGACTCTGCCCCACACCCTGAGTCAGACGCCACATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTG---GAATCTGCTAGTAAAAATACCCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAAAGAAAGTGAAGAAGTCGTCAGTTGTGAGAATTTTAATTGCATTAGTGAGACGGAGAGGCCTGAAGACCCGGCTGCCCTGGAAGACCAGTCCCAGACACTTCAGTCCCAGAGACAATACGCGTGTGAATTATGCGGGAAACCTTTTAAACACCCAAGCAACTTGGAGCTTCACAAACGGTCTCATACAGGTA chr4 + 94230402 81507268 81507267 81508451 81507268 81507267 81508451 1184 ATATGTAATTTTTCTTTTTCCTACAAAAGTGTTGTGAATTATTTGTG-TGTTTCAACATTTGCTTTATTTTACCAGGACCCTTTTTCAGAATTCTTCAGGCCAGAAGAATGATGTCTTTCATTTGGACATAAAAAATGTAGGTGGGATAGGCCAGATCTTGGACTTCATGTATACCTCCCATCTGGATCTTAGTCAGGATAATGTACAAGCTATGTTGGATATTGCACAGTGTCTTCAAGTGCAAAATGTGCTGAATATTTGCCACACCTTTTTAAAATCTTCTTCAGCCA---TAGAGCAAACAACCAATATGCCTTGTAATAGTGTATTTTCCCTGCAGAATAGTTTGACTGCAGATACTAGTTGT---ACCAATGACAGTTATGGAACAAACTTATTACAAGAGTGTCCATCCGACACACAAGCTAACAAAGTCTTGGCTGACCACCATTCTCATGCATCACAGTCTGTTAATCTTCACACACCCTCAGGTGATTTACAGAAGCAGTCACACAACTCCTTAGATGGCAACTGCACAGAACTTCCATTCAAACAACCAAATTACTATTATAAATTGCGCAACTTTTACAGCAAACAGTTCTATAAGCAAAATGCTTGCTCTAATAATGAGAGGGTAGCAGAACAGTCCTTTTCTTACAACACGTCTACAGAAATAAACACAGTACAGAGTAATTCTTGTCCTGTCAGTCACCCTGAATGTATTCTGGAAACCTCTGAACATTTACCATCAAACTTTCTGGCTCAGCCTTTGAATGAAGCCGCTCCAGATCAAGATGCAGAAAGCATGCTGTTGCAGCCCACCAAACAGATGAGGCTGAAAAAGGCAGTACACCTCAAAAAGTTGAATTTTCTAAGATCTCAGAAATCTGCAGAGCAGCCCCCGGAGCCTAAAGGAGATGACAGTAGGATAACACGAGTAAACGAATCTGCAAATGAAAGTACCATGGGTGTGACGAATGTCAGAGTTGCTGAAGAAAAAGAAGCTGATGACTCAGTGAATTCTGAGAATTTTGAACAAACTGTTGAAATTGAAAGATCTCAAGGTCCTTTGGAACAAGAAGGACAGTCACAGACTCTTCAGTCACAGAGGCAATATACTTGTGAATTATGTGGGAAGGCTTTCAAACATCCAAGCAATCTGGAGCTGCATAAAAGGTCCCATACAGGTA ....:.:.x.x..x...x.xxx.x...::..x........x..x.::-...xxxx.x..x.x....x...........x...:...............:................:.....:.....::.x........x:....x.....x......:.............:..:..:.....:.......::.....:...:......:x...:....:.:x.........:.x.....x........x....:.x.x..:.....x...........------.....---...x:..:x..x.::::...............::...x..:..:..:.::.x::....:x.....:.:.x....---.:..:...x.::..:xxxx.xx.:...:.:..:..:...:..x.x..::....:xxx......::x....x...x:xx...:.x.....x....x:..x.......x...:xxx:..x.......xx.x:x:..:..:x.x.x::.:x.:.:........:............x..x........:..............:...:.xx.x...........:..:....x.:....:..x:xx...x.::.:.:.x.x.....:..x.:x..:...:.:...x...x..:...x........xx.x.x...:...x....:x.x:.....x.:........::.......:..:.....:x.::.:..:..:.....x..x.....:.....:......x.......xx.:..:...x.:.xx..xx....x:x..:::xx:x:..:..:::...:...........x........x:.x..:..x..:...:.x.....:..:.::..x.......x:........:x:x:.x..:..:..:xx......::..xx..:..x:x.:x.:---........x.:.:...:....x.:.:x:x::.x.:::x.x:.:x................:x...x..xx:x..x.:..x..........:.x::x.:.:x...:.:x..:..::..x...::..xx:x.xx.x:....:x.....x.....x........x.....:.....::.x...........:.....:x....:.....:........::.......x..:...x....:.......... 47M1D232M6I5M3D74M3D570M3I247M 821/1175 69.9% 1184/94230402 0.0% 16/1175 1.4% -77205355 -17025047 +6268 chr4 + 190214555 4306109 4306108 4306271 163 TTACAAGTTGT-TGTTTTGTTT--TGTTTTAGGTGAGAAACCTTTTGAATGTAACATTTGTGGGAAACATTTCTCTCAGGTGGGAATACTCTTATTTATTGT--TAATAATTGGAAACCTGCAACA-CAGTGTTTTTTTATTGGAAATAAGACATACTTTTGTACTTGT chr4 + 94230402 81512764 81512763 81512931 81512764 81512763 81512931 168 TTAGAAGTTCTATGTTCTGTTTCTTCTTTTAGGTGAAAAACCTTTTGAATGTAACATTTGTGGGAAACACTTCTCACAGGTGGGAATATTTTATATTATAGTACTTACACTTGAAAATTAAATGCATCCGTGTTCTGAGTCTAAAAATAA-ACTTGGTTTTGTGTCTGT ...x.....x.-....:.....--.x..........:................................:.....x............:.:.xxx....x..--.x.:.x...:...::x:xx:..-.x.....:.xxxx:.::......-..x.:x......:::... 11M1I10M2I78M2I22M1I23M1D18M 123/162 75.9% 168/94230402 0.0% 7/162 4.3% -77206655 -17023747 +6206 chr4 + 190214555 4313026 4313025 4313120 95 TTCCTCTTTTTGCAGGCAGGTAACTTGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCTGTGGAAAGAGGTCAGT chr4 + 94230402 81516385 81516384 81516479 81516385 81516384 81516479 95 TTCCTGTCCCTTCAGGCAGGTAATCTCCAGACTCATTTACGTCGACATTCTGGTGAAAAGCCTTACATTTGTGAGATCTGTGGGAAAAGGTGAGT .....x.:::.x...........::.x........:.....x..:..............:..x.....:..:...........:..:....x... 95M 77/95 81.1% 95/94230402 0.0% 0/95 0.0% -77203359 -17027043 +17776 chr4 + 190214555 4315615 4315614 4315978 364 AATTTTCAAATTACATTCTAGGTTTGCAGCCTCTGGCGACGTCCAGCGTCACATTATTATTCACTCAGGAGAAAAACCACACTTGTGTGACATCTGTGGTCGAGGTACAGCTGAGTGTTTTCCTATTCTTCTTGAAGATTTCTGATTAAAATGTTCTCTGTCCTTCAGCTTAACACCTGTTATGGTCTCTCTAGGGTTTAGTAACTTCAGTAATTTGAAGGAGCACAAAAAGACACACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTGGAAAGTCTTTTAATATGCAAAGGAAGTTAGTAAAGCACAGAATTCGGCACACGGGGGAGCGGCCTTACAGCTGCTCTGCCTGCGGTGAGTTT chr4 + 94230402 81517188 81517187 81517546 81517188 81517187 81517546 359 AATTTATGTGTTCTGTTACAGATTTGCTGCTTCTGGTGATGTTCAGCGTCACATTATTATTCATTCTGGAGAAAAGCCTCATCTGTGTGATATCTGTGGCAGAGGTAGGTAAGAACCAAAGCTTTTGCCTCTTAAGGTCTTTGGATTGAAATGTGAGAAGTCATT----TTAAACTGTCTCATA-TTTTTCTAGGATTCAGTAACTTCAGTAATTTGAAGGAGCATAAAAAGACTCATACGGCAGATAAAGTGTTCACCTGTGATGAATGTGGGAAGTCATTCAACATGCAACGAAAATTAGTAAAGCACAGAATTAGACATACTGGGGAGAGACCATACAGCTGTTCAGCATGTGGTAAGATT .....x::x:..x::..x:..:.....x..:.....:..:..:....................:..x........:..x..::.......:........:x......x:xxx..::xxxxx.:.x.x.:....:.:.x:..:x....:......xxxxx...x..----....xx:x.x.:..:-.:.:......:..:..........................:........x..:.....x........x..............:.....:.....x..:..:......x.:..:..................x.:..:..x......x.:..x........:..x..x..:...:..x.. 165M4D15M1D179M 268/359 74.7% 359/94230402 0.0% 5/359 1.4% -77201573 -17028829 +29954 chr4 + 190214555 4320627 4320626 4321316 690 TTTCTTTTTCCAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTCACACTGGGGAGAAGCCGTACACATGTGAGATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTCATGGAGTTAGT-GACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGA chr4 + 94230402 81519471 81519470 81520154 81519471 81519470 81520154 684 TTCTGTCTTGTAGGGAAATGTTTTGCAGGCTCTGGTGACCTGCGCAGACATGTGCGGACGCATACAGGAGAAAAGCCCTATACCTGTGAAACTTGTAACAAGTGCTTCACTCGTTCTGCTGTTTTACGGCGGCACAAGAAAATGCATTGCAAAGCCACTGATGAAGGTCCAAACACACTAGATGAATTTACTCAAGGGATTGAAACTTCTGATCTTGACAAATCTCAGAGCTCTGACTCTTTTGGCCAAGAAATGTCTGTTACGTTGTTACCAGTGTCAGTTAAATTTCCCGTTCGTTCAACTGCGAATTC---AACTGAATTTGGCAG---TTCTACAGATTCTTACTGTAAGCTGCGATCAATGATTCAACACCAT-GACTCAGCAAACCAACAGAAATTGAATGTGGATTCAGCTAAACTCCCGAAAGCTCAGACACAGCAAGCTCCACCACCACCATATGCTTATGCAGATGTAGATGGATCTTCTGCAGAAGAAACATTAGAGTCTGATAATATTTCCATGATTCGTTCCTCTATGGTTAGTCTGGATGGTCACTGTAATGATCCACTAGGCAATCGAACATCATCTGTTGCATACAAGAATACTGAAGGACCATTCTTCTCCAGCATGACCCTCTGGGGTTTAGCTATGAAGACTTTGCAGAATGAAAGTGAACTGGAACAGTGA ..::x.:..x:..............x:..x..x........x.....:.....x..x..x..:..x..:..:.....x..:..x.....:.::..............:..:..:.....x..x:.x..............:.....:........::x...:..::.:...:.::::..:..x..::.:.x:....xx..:..:..:..:..:..:..x..............x........:xx......x.:......x...:..x.:........:......:.:..:..:.:::..::x.x:.....---::.x.......::..---:...:xx.::..:..:......:.:..:..x.....:....x:...-..x.:..:-:....:x....::...:.x.....:.x.x......:x.x..:x.:....::.....::.x.x:..x.x:x.x........:x.:.....:..::xx:.xx.:.xx.:x...x..:.:x..x.:...:::..xx.......:.........x...:.:x.:....::::...x.:::...:..x..:....:....:....x..:::::.x..:.:...:x.x..:..x.x:..:..............:........x:....x........x:............::..::.:..x...... 311M3D15M3D46M1D8M1I303M 472/683 69.1% 684/94230402 0.0% 8/683 1.2% -77198844 -17031558 +3297 chr4 + 190214555 4333872 4333871 4333945 74 GTGCACCAGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGGTTGCATGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......xx.....:...........::........x:xx.x.::x::.x...:.....:..x.:x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -71699332 -22531070 +3065 chr4 + 190214555 4362588 4362587 4362654 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -71670623 -22559779 +3142 chr4 + 190214555 4371392 4371391 4371465 74 TTTCTTTTCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTT chr4 + 94230402 3394726 3394725 3394799 3394726 3394725 3394799 74 TTTCATTCATTTCTATTCTTTCTCTTTCATTGTTTTGATTCTTCTTTACTTTTTTGGTGCTTTTTCCTCTTTCT ....x..:x.....x......:......x..x...:xx.::......x:..:...xx.x......::.:...:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 976666 NA +3015 chr4 + 190214555 4371395 4371394 4371464 70 CTTTTCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTT chr4 + 94230402 45354069 45354068 45354138 45354069 45354068 45354138 70 CTTCTGTTTCTTTCCTTTTTCTTTCTTTTTTTTTAACCCATTCTCTTTCTATAATTTTTATTGTGTTATT ...:.x.......:..............:...:.xx.::x:.:.......x.xx..:..x..x.x..x.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -40982674 -53247728 +3463 chr4 + 190214555 4374040 4374039 4374121 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x::.......:...:..x.xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% -71659161 -22571241 +3100 chr4 + 190214555 4375459 4375458 4375529 71 TTTTAAGTGTTTCCAGTAAAGGCAATTTCCTTCCCTCCCTTCCTCCCTCCTTCCCTTCC---CTTCCTTTCTTT chr4 + 94230402 34354552 34354551 34354625 34354552 34354551 34354625 74 TTCCAAGTATTAACAGAGGAGTAAGCTTCCTTTCCCCCCCTCCCCCCTCCTTTCTTTCCATGTTTCCCTTCATT ..::....:..xx...x::..xx.::......:..:...:...:........:.:....---:....:...x.. 59M3I12M 50/71 70.4% 74/94230402 0.0% 3/71 4.2% -29979093 -64251309 +3355 chr4 + 190214555 4375509 4375508 4375578 70 TTCCCTTCCCTTCCTTTCTTTCTTT------CCTCCCTCCCTTCCTCCCTTTCCTTCCTTCTTTTTTTTTTTTTTC chr4 + 94230402 53757784 53757783 53757859 53757784 53757783 53757859 76 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCC ...:.....x.:::....x::::..------..:...:...::.....:...::......:....:........:. 25M6I45M 50/70 71.4% 76/94230402 0.0% 6/70 8.6% -49382275 -44848127 +3215 chr4 + 190214555 4381999 4381998 4382056 58 TCTCTTCCCTCCCTCCCTCCCTTCCTTCCTTTCTTTCTTTTTCTTTTTTTTTTTTTTT chr4 + 94230402 86518997 86518996 86519054 86518997 86518996 86519054 58 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT .:.............:..:x:...xx.::.......:.....:.:.....:.x:.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -82136998 -12093404 +3354 chr4 + 190214555 4382004 4382003 4382064 61 TCCCTCCCTCCCTCCCTTCCTTCCTTTCTTTCTTTTTCTTTTTTTTTTTTTTTTATGGGGG chr4 + 94230402 59557954 59557953 59558014 59557954 59557953 59558014 61 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTTACAGGAG .::...x:.:......:...:.::...:........:.x......:.....x...::..:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -55175950 -39054452 +10720 chr4 + 190214555 4387620 4387619 4387896 277 TCCCGGAACGATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACCATTCCCCTGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCCCCCGGATAAGGTAAGCCCCCCCACGCCCCTCCACGTTGCCGGGTGTGCACCCCCAAATCTCGCACGGCGGGCGCAACAAAAGAAACGCGCCGCGTGCGCTGGGTACGCGAAGTGGGGGCGGGCTCGGGAGGCCGGAGGGAGCGCGGCG chr4 + 94230402 81539818 81539817 81540066 81539818 81539817 81540066 249 TCCTGGAAGAATGGTGAAACTGGGGAATAATTTCAGCGAGAAGAGCACAAAGCAGCCCCTTCTGGAGGATGGCTTCGACACCATCCCCCTGATCACACCCCTGGACGTCAATCAACTCCAGTTCCCGCCTCCTGACAAGGTAGGGTGCCTTCGG--CTTCCAC---CCCGGAGAATCACACCCAAATCT-------CGGGCAAACAACAAAGAATGGGTTACGTGTGATGAGT----------------GGTTCGGAACACCGGGCAGTACGCTGTG ...:....x:........::.......:......:xx......:....x........x..x.......................:........x..:.....x..:........:..x...........:..x..:......:.x:x..::xx.--.:.....---x....:x:xx...x.........-------.....:x.xx.x..::..:.x.:::....:.x..:..----------------..:....:.x:....:x:.x:...x.:. 154M2D7M3D23M7D37M16D28M 184/249 73.9% 249/94230402 0.0% 28/249 11.2% -77152198 -17078204 +7089 chr4 + 190214555 4391472 4391471 4391596 125 AAGGTGGTCGTGAAAACTAAGACCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACCGTCAGCATCACGGAGGGTGTCACCGAGAGGTTTAAGGTGAG chr4 + 94230402 81543403 81543402 81543527 81543403 81543402 81543527 125 AAGGTTGTGGTCAAAACGAAAACAGAGTATGAACCTGATCGCAAGAAAGGAAAATTCCGTACTCCAAAAATAGCTGAATTCACAATCAGCATCACCGAAGGGGTTTCAGAAAGATTTAAGGTAAG .....x..x..x.....x..:..x..............:...........:...x:x...x....xx....x.....:.....x:..........x..:..x..:x.x..:..:........:.. 125M 98/125 78.4% 125/94230402 0.0% 0/125 0.0% -77151931 -17078471 +6967 chr4 + 190214555 4409569 4409568 4409688 120 ACAGGTCTCCGTGTTGGTCCTCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCCTGGTTGTCTACAAGGTGTACAAGTATGACCGCGCCTGCCCCGATGGGTTCGTCCTCAAGGTAAA chr4 + 94230402 81553961 81553960 81554080 81553961 81553960 81554080 120 ACAGGTAACTGTGCTGGTCCTTTTCGCCCTTGCGTTCTTAACATGTGTTGTATTTCTGGTAGTCTACAAGGTTTACAAGTACGATCATACCTGTCCAGAAGGATTTGTTTTCAAGGTAAA ......xx.:...:.......:........x..x...:.x..x..:..:..x..:.....x...........x........:..:.:::....:..x..x..:..:..::.......... 120M 92/120 76.7% 120/94230402 0.0% 0/120 0.0% -77144392 -17086010 +3360 chr4 + 190214555 4411604 4411603 4411686 83 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.--....:.:.........::::........x.xx.x...x.:..............x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -71621593 -22608809 +30826 chr4 + 190214555 4417224 4417223 4418072 849 TTGTCTTTCAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAATTTTACACAGTCATAAACCACTACAACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGCCCTGGATGTCAGTTCTGTCAGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCATTAAATATAATTACTGATACTTTAGAGGTTACTCA--TTTACGGTGCAATTGCTTCTGTTTGCTAATGCTGCTTTG------CAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAGCTCTGACACCACTTTTCATGTT-------AAGATCTTCATTTAGCTCCTTTACTGGGATTTATTGGATGCTGTAAAAAAATAAATTTA--CACTGGATATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTGT----GGAATTGAT------TTTCTGAACCGACCCTGCTG-----TCTGCAAACCT-TCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGC-AAGCCTACTTCGCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA-AGTAAGTGGCATAGAGAACGAGGAAAAAG------------ACCCCCCCACCCCTCCCTGTGCTG------ACTCCTGAGTCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGTGT-------------------GGATTGACTACTCCCTCCCCTCTGACTCTGGCATCTTGGTAAGGA chr4 + 94230402 81559280 81559279 81560174 81559280 81559279 81560174 895 TTTCTTTTCAGAATAATCAATGCATTCCAGCTGGGTTGGAAAACTACTACTCTGAACAAGACTCCAATGCTCGAGGGAAATTTTACACAGTCATAAACCACTACAATCTGGCCAAGCAAACCATCACGCGCTCAGTGTCCCCGTGGATGACAGTACTGTCAGAAGAGAAACTGTCTGAGCAGGAGACTGAAGCCGCTGAGAAATCAGCTTAGTGTGATAAGCTAATTATTAACACTATGTCATTTGAAGGTAACTAAGGGACTTTAAGAAACTTTTCATTAAATATAATTATGGATAATTTAGAGGTTACTCATGTTTATGGTGCAATTGCTTCTGTTTGCTGATACTGCTTTGCAAAAACAAAAAAAACATGCTGCAGAACATTCATGGGCATAAAACAAGATGCGTATCAGCATTGCTT-TAGAGCTTTGACACCATTTTCAATGTTTAAAGAAAAAAACAACAGATATGTTCT----TGCAGTTTATTGGATACTG-------ACAGATTTCTTCTCTGGATTTTC--AGGGCTTAGACCTTA---AAGCGTGTTCTGTTGTCTGAACTGatattttatttattaatttttattGTTAGTCATTTTGCAAACCGAAACACCACAGCCATAACTAGAGTGATCTCTTGTTTAGCTGAGAGCTGTGTTTAGTATTTAATTTTGGCTCGAGCAAAAATGATAATCAGCACTGA----TGTCAAGGG----CGTAACATAATGACTTGTATGGAGAGCGGAAAAAAAAGTGTCAGGTAGCATTTTTCTTACATTTTCTTTACTGTTATTTATTTGTAAGTGATAATGAAGT-TCTCTGCAAGAAGGCATGCTCAATGTTTTATTATTGCTGTCAACAGGATTTAACTGCATTTCCACTGTGGCTTTAGCATCTTGGTAAGGA ..x::........:.x:..:.....:....xx..x.....:.:.......x.x..:..........:...:..:.:..............................:...........:.x............x..:..x..x......x....x..............:.....:.................x........:.........:.x...::..x.:..x:.x...x.:.....:...x.::....x..........:..::..x..................:x....x...............--....:......................:..:........------....x.....x......x..x..::..:..........:x.::...:.x..........:.-x......:........:...:x.....-------..:.x.xx..xx..xx.:..----..x::..........:...-------.:.:....x--.x......x.x.--....:..:..:..:.---..::.::..:...----x...:....------...x.x..::xx:x:..:.:-----.:........x-xx.x...:.......x..............:.:.xx...:.....-:x.::..x.x:x:.x..:.xx....:x..xx.::.:xx.x...::....----..:.....x----:...::.-.:.:.x.x.:..:....:..:::.....:------------.:::::.:xx.x:.::..x.:...------.:.:x.:...x:x::..::::-x.:......x:x....x....::...-------------------.....x.x:xx:x::...x..x..:..:.:............... 313M2I39M6I61M1D27M7I20M4D19M7D9M2I12M2D15M3D13M4I9M6I20M5I11M1I45M1I49M4D9M4D7M1I29M12I24M6I21M1D26M19I45M 602/823 73.1% 895/94230402 0.0% 98/823 11.9% -77142056 -17088346 +6529 chr4 + 190214555 4420035 4420034 4420143 109 TAGCTGTCGTACCAGTCGAGGAAGAGCAAGGAGAAGGAGCACATCACGAGGAAGAAGAGGATCCACACGCGGAAGCCAGCGTTGTTTTTAATGGCCTGGGCAGGGACGG chr4 + 94230402 81562268 81562267 81562376 81562268 81562267 81562376 109 TAATTGTCATACCAGTCCAGGAAAAGCAAGGAGAATGAACACATCACCAGGAAAAAAAGGATCCAAACTCTAAATCCAGCATTGTTTTTGATTGCCTGTGAAGAAAAGG ..::....:........x.....:...........x..:........x.....:..:........x..x.x:..x.....:........:..x.....x.x..::.x.. 109M 86/109 78.9% 109/94230402 0.0% 0/109 0.0% -77142233 -17088169 +6937 chr4 + 190214555 4420862 4420861 4420965 104 ACCTCTCTTATGTCTTCGTTGCCTTCCTTGATATTTTCAGTTGCCCCCACAACTAACTGGTGAATGCTGTCAATCTCAGCTTCCTGTGGAAGAAAAGATAAATA chr4 + 94230402 81564051 81564050 81564154 81564051 81564050 81564154 104 ACCTCTCTTATGTCTTCATTGCCTTCCTTGATATTCTCTGTCGCACCCACAACTAATTGATGGATGTTGTCAATATCAGTCTCCTGTTAAAAATAACAAAAATA .................:.................:..x..:..x...........:..:..:...:.......x....::......x:..:.x..x.x..... 104M 86/104 82.7% 104/94230402 0.0% 0/104 0.0% -77143189 -17087213 +5857 chr4 + 190214555 4423509 4423508 4423606 98 TTTTTTTACCTGTTGCAAAACCTTTTCCGTGAATATCTCTTGGAGTCTGGAAATCTCAACCACTCTCCCTTCGATTTGCCTTCATAAAAAGAACAGAT chr4 + 94230402 81564704 81564703 81564801 81564704 81564703 81564801 98 TTTACTAACCTGTTGCAAGACTTTCTCAGTGAATATCTCTTGTAATCTGGAAATTTCTACCACTTTGCCTTCAATTTGCCTTGGCAAAGAAAAGAAAT ...x:.x...........:..:..:..x..............x.:.........:..x......:.x.....:.........x::...:.:..x.:.. 98M 77/98 78.6% 98/94230402 0.0% 0/98 0.0% -77141195 -17089207 +5676 chr4 + 190214555 4425124 4425123 4425245 122 TAAAGCAGGCTATCAGCTCACAGAGGAGCTACAAACATACCTCACTTCATCAAACAAGCTGTTCATTTCACCAATTAGTCGCTGATTTTCCTGTTCAAACTGT----GAGGAAACAGACACACTCA chr4 + 94230402 81565175 81565174 81565297 81565175 81565174 81565297 123 TACAGCAG-CAATCTGTCCAAAGAACAG--AAAATCATACCTGACTTCATCAAACAAGTTATTCATTTCACCAACCAGCCTCTGGTTCTCCTGTTCAAACTGGAAGAAAGGAAACAGTCAGTCTCA ..x.....-.x...x.::..x...:x..--.x..x.......x...............:.:.............::..:.x...:..:..............x----:.........x..xx.... 8M1D19M2D73M4I19M 95/119 79.8% 123/94230402 0.0% 7/119 5.9% -77140051 -17090351 +5994 chr4 + 190214555 4434738 4434737 4434878 141 AAAATAAATAATTAGGCAGAGAATAGCATTACCATTTGTATTTCTTCTGGGGATAACTCATCTTCGCCTTTGCCATCTCCCCACGTTCCCAATTCAGGTTGTGTTTCAGCCAAAATTTTTTCTGTTAAAAAAAAAATTGAA chr4 + 94230402 81571206 81571205 81571346 81571206 81571205 81571346 141 AAAATGGACAATGAGACTAAGTGCATACTTGCCATTTGTATTTCTTCAGGCGACAGCTCATCTTCACCTTTACCATCTCCCCATAACCCCAGGTTAGACTGGGCATCGGGCAGATTCCTGTCTGTAACAGAAAAACCAGAA .....::.:...x..:.x:..x::.xxx..:................x..x..:.:.........:.....:...........::x:....:x.:..::..x.:x..:.x..:.x.::.x.....x.x.:.....x:x... 141M 96/141 68.1% 141/94230402 0.0% 0/141 0.0% -77136468 -17093934 +7961 chr4 + 190214555 4450841 4450840 4451151 311 GGCTTCACTGACTTTTAAAATAAAGGACTCCTTTAATGTCTGTCATCCTTTGTGTCCAGAGGATGCTAATGTAC-AAGTTTCCAATTTAAAAGGAATTAAA-GACTACAGTGCAGCAGACTTAGACAAAGTTGAGTGCCTTTCTTTTCTTAAGTGATAAAAACAGATTCTAACTATATACAGAATGTCTACTAAAGTCCCCAGGGAAATTACAAATTAACTAGTTGAAGCCAATTTGGGGGAAAGAAAGCAATTTTTAA-AAAGCCATCAGAAAGATCAGTTTATGCCCCATGATTTATTTAAACTGATTTCTC chr4 + 94230402 81577588 81577587 81577869 81577588 81577587 81577869 282 GGATTAATTTCCTTCTAAATAAATGTATTCCCTTGTTATTTGTTGTCCTTGCTTTCCACTGTATAATAATCTACGAAGTTTTCAATTAAAAATGAACAAAATGTCTGGAAAGCACTA--CTTAAA--GAGTTGA-----------------AGTGATGGGA---GATATTATC---ACATAAAATGCCTGCTGAAATCCTAGGGGAAATTACAAATCGACTTGTTGAAATCACAT-----GAAAAAAAGGATTTTTTCTTCAAGTTATCATAAAGATTGGTTTATTCCCTGTGATTTATTTAAATTGAATTTTC ..x..x.:.xx...:....xx..x.x.:...:..:x.:.:...::.....xx.x....xx.x..:x....x...-......:.....x....x...:x...-.x..:x.:x...x:.--....:.--:......-----------------......:::.---...x:..x.---.:.:.:....:..:..:..:...:x:..............::...x......::..xx.-----....:....x.x.....xx-x...::....x......::......x...::.............:...x..:.. 74M1I26M1I15M2D6M2D7M17D10M3D9M3D59M5D19M1I54M 198/279 71.0% 282/94230402 0.0% 35/279 12.5% -77126747 -17103655 +3089 chr4 + 190214555 4455012 4455011 4455078 67 TTTTCCCATTTTATAGGTAAGGAAACAAAAGCCCAGAAAAGTTAAGCAACCTGCTCAAAGTCACACA chr4 + 94230402 51253953 51253952 51254019 51253953 51253952 51254019 67 TTATCCCATTTTCCAGAAAAGGAAACAAAGGCCTCAAGAGGTGAAGTGACTTACACAGGATCACCCA ..x.........x:..:x...........:...:x:.:.:..x...::..:.:.x..:::....x.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -46798941 -47431461 +9192 chr4 + 190214555 4457172 4457171 4457520 349 CAATGAAAGC--AATACTTACAATCTTTTCTTATCCACCACTCTTTTAACTCGGATGGCTCTCTGTTCTGAGTAAAGTTTACATACTCCTGTT-------GCAGAAGAAAATACCAG---AAGAGAGACTGCTTAAAACAGCTTCTCAGGCAAAGCCA-TCATTAAATATAATGAGATACTACAGTCTTCAGCTAGCAAAGCTAAATTCTGCATCACATCTATTGTGAAATGTTACATTTGACCTTTAAAAGAAAATGAAATACTTTTCAAGTAATCTTCAATGAAATCCAAAACAGCGGTCCTGTGCTCCTTCACTTGCTGGGAATGTATCTCCTTGTGAGCTGTAACAGAAAAAGACAAT chr4 + 94230402 81579316 81579315 81579611 81579316 81579315 81579611 296 CAATGAGAGCTCATTACTCACAGTCTCTTCTTATCTATCACTCGCTTGACTCGGATGGCTCTTTGTTCTGAATACAGCTTACACACTCCTATTTGAGAGATCAGTAAAAAAGTTCAGGTTAGGAGAGCATGATT------TCTTCCTTGGAAAATACACTCATTCATTTTAACCACTCACTA-----------TTGCAGAA-------------------------GAAATACCAC------------------------ACACTTTTTAAGTAATCTTCAATGAAGTCTAAGACAGCTGTTCTGTGCTCCTTCACCTGAGCAGATTGGACATCCTTGTGTGCTGAAATGCAAAAGAAAGAT ......:...--.x....:...:...:........:.:.....x:..:..............:........:..x..:.....:......:..-------x...x.:....xx:...---.:.....xx..x..------x....::x..x...xx..-.....x.x.x...:x.xx:....-----------.x...:.:-------------------------.....:::..------------------------.:......:.................:..:..:.....x..:..............:..xxx:..x..x.:x........x....x..::x....::.x:.. 10M2I81M7I17M3I14M6D18M1I23M11D8M25D10M24D102M 211/283 74.6% 296/94230402 0.0% 79/283 27.9% -77122144 -17108258 +8968 chr4 + 190214555 4459364 4459363 4459500 137 CACTTTACCTTCTGTTCGTAGTTGCTGAATTGCTTCTGAACAGGTCCTCATGAATATCTGGGCATCCTGGTCTATCTGGTCTCGTTCTGTGTCTGTCATCCTCCCATATTCAGACATGGTATGGCTAAAAA--AAGACA chr4 + 94230402 81580983 81580982 81581121 81580983 81580982 81581121 139 CAGTTTACCTTCTGTTCTCAGCTGATGAATGGCATCTGCACACGTCCTCATAAATATCTGAGCATCTTGATCTATCTGATCACGCTCGGTATCTGTCATCCTCCCATATTCAGACATAATATGGCTGAGAAACAAGACA ..x..............x:..:..x.....x..x....x...x........:........:.....:..:........:..x..:..x..:..........................::.......:.:..--...... 131M2I6M 115/137 83.9% 139/94230402 0.0% 2/137 1.5% -77121619 -17108783 +6187 chr4 + 190214555 4471591 4471590 4471724 134 AGAAAAGAACACAGTCACCAAAGTCCTGGTAAAAAAATATGTACTTACCTATAAGCATTAATATAATCTTTCCTGTGTTCCAGAAGAAAATCTCTCAGTTTGCCAATGTGAGAAATCT----AAAATTAAAAAAGAAA chr4 + 94230402 81590378 81590377 81590515 81590378 81590377 81590515 138 AAAAAAAAAAAAAAACACAGAACCATTTAAAAAACAATATACGCTTACCTGTATGCATTAATGTAATCCTTTCTGTGTTGAAGAAGAAAATCCTTCAGCTTCCCAATATTGGAAATCttaaaaaaaataaaaaataaa .:....:..x.x.:x...x:..x:x:.x:x....x.....:::.......:..x........:.....:..:.......xx...........::....:..x.....:.x:.......----....x.......x... 118M4I16M 99/134 73.9% 138/94230402 0.0% 4/134 3.0% -77118787 -17111615 +5985 chr4 + 190214555 4480984 4480983 4481472 489 GCAGATTCCACACAAAGGGA-GCTCTGGGAGCATGGCTGCCAGCTGCCATCCCAGGCGGCAGGCCCAGCTTTGTTTTTATGTGTCACCCACAGAACAGCCTTGCTAGCTGTTCCTTCG---TGGGTGTTTTGTGAATTACCCAAAGCACGATATA---CTGTACAACAAAAACCCTGGTACAAAATGATGGGATTCTTCTCAAAGAGCGACCGCATTCTGACTGTGGGGAGAGTTC-----AAAGCAGTCGGCAAGTGTCCTTTGCTGATCACAGCAGTGGTTTGACTTGCAAACCCCCTCACCCTTCCCAGGATGATAGAAATTCTGTTCTGCTGGCACTCACAACACTTCCAACAAAGACCTGATTGATTATGGAACACTAAGTACTGATTTGCATAATTTG---CCTCTGCAAGAAAC--AAGCATTGTTCAAGATTAAAGAGACTCCAGTAGGTCCCTCTGGCATATTGTAAAAAGGTCCCTGTAACACAAAATCATTATTT chr4 + 94230402 81595868 81595867 81596302 81595868 81595867 81596302 435 GTAGGTTCAGCACAAAAAGAAGCT----GAGAATGGCTGCCATCTGCTACCACAGGTGGCATGCACAGCTCTATTTGTACACGAGGCCTTCAT--TAGAAATGGTGGATGCTCTTCTGGTTCGAGATTTTTCTTATTATTTTAGAGCAGGTTACATTTCTAAATAAGATAAAC--------------AGGACAGTATTCCCTAAAACACAGCACCTTTGAAAGATGCGTATACTTTGAACAAAGACTCTGGGTATGTTTCCT------------GCAGTATCTTAGC-----AATACGTACACCATTTC------------------------TTGCCACTCA---------CAACAAAGAATTGATCACTCATGAAACAGTAGGTTCCAATTTGCATACGTTTAACCCACTGCAAGAAGCTGCAGCATTGTTTACGATTAAAATGATTGGAGTAGGTTCCCGTGACATATTGT-AGAGGAAGCCGACAGCGCTGAATAGTCATTT .:..:...x:......::..-...----...x..........x....:.:.x....:....x..x.....:.:...x..:::.xx:..:x..x--:..xxx..x.:.x..:..:.::.---:.:.xx....x.x.x.xx:::.:....x.x..:.---..:x.:..x.x....--------------.x.:x.x.x...:.x..:.xxx.x.:.x..:x:.xx:..x.x.x.x..:-----..::.xx.x..:.x..x....------------.....:x:..::.-----..:x.x:x....x..:.------------------------:..x......---------.........x:....::x.:...:....x..:..x.::.........xx..x---..x.........:.--x.........:.x.......:x..:.xx.......:..:x..:........-.:.:.:xx..x::.:.:.x:...x:.:.... 20M1I3M4D65M2D23M3I34M3I15M14D49M5I21M12D13M5D17M24D10M9D52M3I14M2I51M1D31M 269/418 64.4% 435/94230402 0.0% 88/418 21.1% -77114884 -17115518 +14126 chr4 + 190214555 4488574 4488573 4488900 327 CCACTAGGTGGTGCTCTCCACCACACTGTTCCTCAGTGAGCAGTACAGTA-----------CATCAAAAT-GACAACAGCCTAGTTTTAAGATGATTTGTCTCTTGAGGATATACATTTGGTTTAAGTTTCTACTGCAAA-GTTAAAGTTCTTAAGATAGGTCATGCAGACCAATTGCTCCTGTAATCTGAAACTCAAAAGAGCAAGTAATATCTAAACAAGGGGAGGGGGTGGCCCTGAGCTTATAAGGGTCTCTAAGAGCCAGGAGACAGTCAGCCTGGCTACCTCTAATCTCACCATCAAAACTGTTACCTTGTTCATTTTCTGCTTCACATCAGCA chr4 + 94230402 81597355 81597354 81597671 81597355 81597354 81597671 317 CCATTAGGTGGTGCTGTCC----CACCGGC-----ATGCACAGCACAGGATCCTGCACTGCCCCCAAAATCGCCAAC------GTTTTCTGAAGATTTGTCTCTGGAGGGTATACATTTGGTTTAGGTTTCCACTGCCAACGTTATAGTTTCTAAACTAGGTCACGCAGATCAATTGCTCCTGTAACCTGAAACCCAAAAGAGCAACTAATATCTAAACAACATAA--GGGTGGCCATACGCTGCAATGGGGC---AGGGGAAAGGAGACAGTCAGCCTGGCTACCTCTAATCT---CATGGAAATTGGGCCCTGGTTCAGTTCCTGCTTTCCATCAGCA ...:...........x...----...:.x:-----:..x:...:....x.-----------.x:......-.x....------.....xx..x...........x....:...............:.....:.....x..-....x....::...:x.......:.....:...............:.......:...........x..............x:x:.--........x.:x...xxx.x...x.---.:.:.xx...............................---...x:...:..xxx...x.....x..:......:x........ 19M4D7M5D15M11I9M1I6M6D57M1I85M2D25M3D38M3D43M 246/304 80.9% 317/94230402 0.0% 36/304 11.8% -77108781 -17121621 +11216 chr4 + 190214555 4490724 4490723 4491243 520 AAGAATTCACATTTAACCTTT--ATTTTAAATTACAGCCAAAGTCTTTGTTTCA--AATCCACATAAATCACTGTTCTTCTCTCTG------CAAATACATTTTAGAGAAAACATTATTTAATGTTACATCTGACTTTAATAGAGTTTCCCATTTGCTTTTGCATGTTTATTATCAAACTCTAATCATGACATTTCCAAACTTATTTATACTTTCACACAAACTTCCGAAGTTTTCCCAACTTAAATA-AAAACCCACAAAAACTGTGGGAAATGTTTTGCTTGAAAGATAAAAGCAACGTGGTCCAAATGTACATTTGTAATAATCAGTGTTTACTTTTGTTGTTCAAA-CATTCGGCTTATAGCACTTTCAATATACGCATTCAACTTAATTTTCTTGTCTCTTAAAAAAAAAAAAAGAAGGAAAGTGTTTTCTT-TCCCTGTTTTGCTCTCAAAATATAAACTCATTTAATGCAAAGCATTCCCGGATCAGGCATGTTTTA--AACTACGAGCACGTCTAGCCTCAACAGCA chr4 + 94230402 81599119 81599118 81599605 81599119 81599118 81599605 487 AAAAATTAACAGTAGACTTTAGAATGTACAGTTATGCTAGATGTTTTTATTTAACTAGTCTTCAT---------TTACTCTCTCTGAGGCAATAAATACCTTCAATAAAAAAAA-------AAGGAACATCTGATTTTACTTAAACTAT---TTCCCTCTTTCTTGTTTATAGTCCAACTCTAATCATAACTTTCTTGAACATTTATATTTTTTTACACAATCATCCAAAACCTCATTGACTAAAATATAAATTCCACAACAATTGTGGGGAATGTTTTGGTTGAGAGATAAAAGTAAATTGGTCAAAATACATATTTGCAATAATTGGCCTTTACCATCGCTGTTCAAAGCACTCCACTTACAGCAC-CGCAGTGACTGCACTCAGCT--------TTGTGTCT--------------GCATGAGAGATTTTTCTCATCCCTGT-----TCTCACAGGCTAAACTCATGCAGCGTTATGTATTCTTGT-TTAAATATATTTCACGATGTAAGAAGATTTCCAGTCTCTAATGCA ..:....x...x.x:..:..x--..x.xx.:...::x:x:.x..:...:...x.--.:..:x...---------..x:........------:......x..:x.x.:....x.-------.x.xx........:....x.x:.::.x:---..:x..:..x.x.......x:..x............:..x..::::...x.x.x...x:...:......x.x...:..:::.:x:::...x.....-...x:......x..:......:.........x....:.........:..xx.....x....::.:.....:......::.:x.....:x.:.:........-..:..x:....:.....-:x..:.:xx:...:...:..--------....x...--------------.x.x..:..xx......:-.......-----.....x.:xx.........x:.::.:x.x.:....::.x-.:.:::..:...:.--.xx..x..:x.:x..:..:...x.xx... 21M2I31M2I9M9D12M6I22M7D28M3D96M1I101M1I17M1D20M8D8M14D18M1I7M5D39M1D14M2I29M 320/472 67.8% 487/94230402 0.0% 63/472 13.3% -77108395 -17122007 +13770 chr4 + 190214555 4491867 4491866 4492249 383 TTTTTTTAGCCATTAAAAAACTAAAAGTATCCTGACAAGAGATTCTGGTTTTGAAGTAT-GTCACA----CTCCGGTTACCCAGCCATGAATCTCAGTTCATTTTTTAAAATGAGGTCTATTTCCTGTAATTTTAGATATTTTAGAGTACAATTATTT-TACATTTTTATGATGCCTTTGGGG-TATCATTACAAATATTTTTATGTG--TTTAAACTTAGGAAAGAAAAATTAAGTAATAGCTTCTCTTATAGGGAG-CTGTCAACTCTCTCCTGGACAAAAATCTTTGTTTTAAAGCAATCTAGAGATTTATATCCCTAGTAACCATAGAAATTAATCTTAAGCTTTAGAAAAAAATTGCATAAAATGCTCTTTATTTAATTAAAATCAGA chr4 + 94230402 81600908 81600907 81601287 81600908 81600907 81601287 380 TTTTTTTAATCGCTTAAAAGTGGGAA--CTCCTGACACGA-ATTTTAGTTGTGAAGCAAAGACACCTTTTCTCCCCCCTCTCAGCTATGAATCTTAAG--ATTTCTTAAA----TGTCCATTTCCTGTAATTTTAATAATTTCAGACTATAATTATTTATATATGTTTATGATACCTTTGGGGGTATCATTACAATTATTTTTTTAAGAATTTATACTCAGGAAAATAAAATTAAGTAATAGCTTCTCTTAAGGAGAGACTGTCAGCCCTGCTCTGAATAAACAATCCCCCTTACAAGTAAGCTCGTGATTTATACCCCCTGTAACCACAGAAATTTAGCTTGAGTTT--ATACCAAATAGAGTAAAACAACC--TATTTAATGAAAATCAGA ........::.::.x....::x::..--x........x..-...:.:...x.....:.x-.x...x----....xx::x.:....:........:.:x--....:.....----x...:................:xx....:...x..:........-..:..x........:.........-...........x.......x.:x.--....x...:......:x........................x:.:...-......:.:..x::...:.:...x.x::::x:..xx...:..x..x.x........:...:x.......:.......x.x...:..:..--:x.xx....x.x:.....::x:.--........x......... 26M2D12M1D18M1I6M4I28M2D10M4D44M1I24M1I24M2I48M1I89M2D23M2D18M 277/370 74.9% 380/94230402 0.0% 23/370 6.2% -77109041 -17121361 +3688 chr4 + 190214555 4495125 4495124 4495212 88 AACTTACTTAACCTGTCTTTGCCTCAGTTTCCTCACTTGTAAAATAGGAAAGATAT--AGTACATGCCTCA---GAGTGTGTGTGAGGATGAA chr4 + 94230402 83501151 83501150 83501242 83501151 83501150 83501242 92 AAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTAT-TGTGAGGCTAAA ..x.............x.x...........:.:...:........:.::xx....x--.x...x.:.....---.:..:.-.......x.:.. 56M2I13M3I6M1D12M 68/87 78.2% 92/94230402 0.0% 6/87 6.9% -79006026 -15224376 +34326 chr4 + 190214555 4515992 4515991 4516445 454 ACCAAGTAGCAAAAATGAATCCTTTAAGAACTATCAAACCAAACAAAAAATAAAATTAGATATAAATTCAACTTTTAGACTGTGGTCAATTGAGGTCTAGACAAAACCCTATGTTTGTTCATTGCCTAGTCTCCAGTCTGCTCCAAGTTTGAAAAGGTAATTGAACACAGTCTATAATTACTGGATTAGACACAGATGGGCTCTGTACATTTCAGGGGGAAAAAAGCACTGTTTTGATTCATTTTATGATTGCCTGTAAGGTCAGACTTTTCAAAATGTACTTTCATCTGTTAAATGGTTTCTCAAATTCCCTGGGGTATATCTTCAATAACTGTGATGTTTTAAGCAATTTGGGCCTATCAGATCCAGTCTTTGAATATAACTAGCTGCCTATTTTCTAGTATTATAAATGTGCATGTAGGTTAATTGCTACATCTCGTACATATTTTCTGAA chr4 + 94230402 81605057 81605056 81605506 81605057 81605056 81605506 450 ACTAGACAGCAAAA-TAAATCTTTTAAAAACTATCAAGCGAAGCTAGAAATAAAATGAGATATAAATTCAAGTTTTAGACTGTGGTCAATTGAGGTCTAGACAAAACCCTATGTTTGTTCACTGCCGAGTCTCCAGTCTGCTCCAAGTTTGAAAAGGTAATTGAACTCAGTCTGTAATTACTGGATTAGATACAGATGGGCTCTGTACATTTCA-GGGGAGGAAAGAACTGTTTTGATTCATTTTATGATTGCCTGTAAGGTCAAACTTTTCAAAATGTACTTTCATCTGCTAAATGGTTTCTCAAAGTCCCAGGGGGACATCTTCAATAAC--TGATGTTTTAAGCAATTTGGGTCTATCAGATCCAGTCTTTGAATGTAATACGCCGTCCATTTTCTAGAATTATAAATGTGCATGTAGGTTAATTGCTACAACTCTTACATATCTCCAGAA ..:.:::.......-.:....:.....:.........:.x..:.x.:.........x..............x.................................................:....x.......................................x......:................:.......................-.....::....x.....................................:.........................:................x....x....x.:............--.....................:......................:...:xx..:.:.:.........x................................x...x.......:.:.x... 14M1D199M1D117M2D120M 408/450 90.7% 450/94230402 0.0% 4/450 0.9% -77089065 -17141337 +3007 chr4 + 190214555 4520707 4520706 4520772 66 AGCTTCCCAAATGGAATCTGCAGAGAAAAAAAAACACTGATTCCAAAAAGAAGACTGTGCAAACAA chr4 + 94230402 3780779 3780778 3780844 3780779 3780778 3780844 66 AACTCCCTATATGGAATCTACAGGCAAAAAAAAATACACCTTCTGAAAATAATATCCTGCACACAA .:..:..:.x.........:...:x.........:..xxx...::....x..x.::x....x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 739928 NA +37916 chr4 + 190214555 4521611 4521610 4522289 679 AGATGATTGTAGAAAGGGTATTTAAAATTATTAACTGATCAAATATTTGTAGTTGTCATTAAAAAAAAAATACAACTTAGCAATTCAGTTCAGAAAGAAGAATATCCCCAGGAACATACACATCTGTTTAATATTACAAGCCAACTGTCAACATCCTAAGTGAAGTTTTAATTTAATATTTTTTCTTTCTTGATGTTTTACCTTTAATCAATGCCTCATGAGAGTATCAACTTTCTATAAGAAACTGTTAAATATAAAGAAATGTTATTGTAGCATGTTTATAAAATCATAGTTCGAGAACTTTTTATTTTTCCAAAGCCTGACCACAACTTAATTATCTGCAGGACATTCCAGGCTCACAATTGCAAGCTCCAGTTCCCAAGCAATTTTAAACAATATCTACTGTACAGGACAGAGGGTACACAAAAGACCGCAACATGGTTATATTTCCAAAAGTCAGCATTAGGCCCTTTAGACATGGTTTTTATTTTCATTAAACAATATTTGTTTCCTCACTAATCATTAAATGGTTTTCATCACTATTGCCTGCTTTCCTTTCACATGTCAG-TTGTTAGCATCAGTGTTTGTGTTCATAATAAATATAAAAGTAATCCACCCCATCATTTAAAAATGAACACACACGACGTCTGGTTCA-ATGAGTGTTAAGAGACTTAGCAAT chr4 + 94230402 81608418 81608417 81609067 81608418 81608417 81609067 650 AGACAATTGAAGAAAGGG------GAATTTTAAATTAATCAAAAATTTGTAGCTGTCACTTGAAAATGGGTATGA---AACAA---AGTTCTAAATGAAGAATATCCC-AAGAACATGCACATCTGTTTAATATTACAAGCCAACTGTCAACATCCTAAGTGAAGTTTTAATTCAATATTTTTTCTTTCTTGATGTTTTACCTTTAGTGAATGCCTCATGAGAGTATCAGCTTTCTATAAGAAACTGTTAAATATAAAGAAATGTTATTGTAGCATGTTTGTAAAATCATAGTTCGAGAACTTTTTATTTTTCTAAAGCCTGACCACAACTTAATTATCTGCAGGACATTCCAAGCTCACAATTGAAAGCTCCAGTTCCCAAGCAATTTTAAACAAAATCTACTGTACAGGACACACAGTATTGCTAATACTGCTACATGGTAATGTTTTCAAAAGTCAGCACTAGAGGCTTTAGACATGG-TTTTATTTTC---AAGAAATATTTGTTTCTCCACTTATCATTAAATGGTTTTCATCGCCGTTA--TGTTTGTCTTTCACGTGTCTGTTTGCTACCATCA---TTTATTTTTAATACGAGTGAACTAGTTATGAAGAC---------AGATCTCACGTACAGGATGCCTTATGTATAGAAGTGTTCTAAGACTAAGCAAT ...::....x........------:....x.x..:.:......x........:.....:.x:....x:::..::.---.:...---.....x:..x............-.:......:.......................................................:................................:.x....................:..................................................:................................:.......................................:...........x..............................x.................x.x:...:xxxx..x..:..x.......x..:...:............:...:xx............-..........---..:x............::....x....................:.::..:--..:..x:.......:....x.-...:..x.....---...:.x..:.xx.::.:.:x.xx...x..xx.xx.---------.:.x:xx..::...x..:.:..x:.x:.-.x:......xx:.....x...... 18M6D51M3D5M3D22M1D372M1D10M3D50M2D21M1I12M3D35M9D28M1I24M 543/648 83.8% 650/94230402 0.0% 33/648 5.1% -77086807 -17143595 +3104 chr4 + 190214555 4527814 4527813 4527873 60 ATATATAATTTTATATATATATGTCTTTATATATATATACACACACACACACACATATAT chr4 + 94230402 54005674 54005673 54005733 54005674 54005673 54005733 60 ACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGT .:.x..x..x..:x.:.:......x..........:...............x.x..x.:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -49477860 -44752542 +3106 chr4 + 190214555 4527825 4527824 4527871 47 TATATATATATGTCTTTATATATATATACACACACACACACACATAT chr4 + 94230402 53944239 53944238 53944285 53944239 53944238 53944285 47 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACAT ......:x.....:.:..x..x.....:................:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -49416414 -44813988 +9917 chr4 + 190214555 4541736 4541735 4542086 351 GGGGTCCCTGTCGCAGG--ACTGCCCCCTCCTCAACCCG-----CCGTTTCCATAGCAACCAGCTCACCACTTCGCGGGCCCGGCTGGAGAAGTCGCCCTTGGGCCGGGG---GCTCCGGCGGAACAGCTCGTCCCGGCTGCCATCGACCCCGCCGCCCACCGCCACTCCCAGCGCCTTGTTCCGCGTCTTCACGGTCTTGACGCTGGCCCGGAATAGCAGCGTGATGTCCACCGCCATAGCGACCCGCACCCTCAGCCCCACACTAGGCCCGCCCACGTAAGCAGCCGGCGACCGCGGCGCGAACCCGGCCGCTGAAGGAC-TGGTCCTGCCCCACACGCCTCCCCCCGGCAACGGCGACG chr4 + 94230402 81617021 81617020 81617340 81617021 81617020 81617340 320 GGGCTgcccgccgccggccgccgccacccccctgccccggccgcccgcTGCC-------CGCACTCACCACCTCCCGTGCCCGCCCGGTGAAGTCGCTCCTGGAGCGGGCAGCGCTACGCTTGAGCAGCTCATCCCGGGCGCT---------GTCGCCGGCCGCCACTCCCAGCGCCTTGTTGCGGGTCTTCACCGTCTTCACGCTGGCTTTGAACAGCAGGGTGATGTCCACCGCCATGGCGGCC---------------------GGCCCGGCCCCGT---CCACCGGTG-CCTCCGCGCAGTGCCTTCC-CCGAGCAACGCGGCCCCGCGCAGCGCGTTCCGCTCGGCCGGCGGCAGCG ...x.x..:.:...x..--:.:...x..:..:::x....-----...:.x..-------.xx:........:..x..x.....x.:..x........:.:...:x....x---...x..x:x..:......:......x:..:---------.:....x:......................x..x........x.....x........::x...:.....x.................:...:..---------------------......x..x...---.x:....:.-..x.x....::xx..xx..-.:..:x:..-:..:..:..x.x:.:..:::.x.:.x.x.::....::.. 17M2I20M5I8M7D51M3I30M9D94M21D13M3D9M1D19M1D9M1I39M 222/309 71.8% 320/94230402 0.0% 53/309 17.2% -77075285 -17155117 +3484 chr4 + 190214555 4558182 4558181 4558264 83 CATGGTGGCAGGCACCTGTAATCTCAGCTACTTGGGAGGTTGAGGCAGGAGAATTACTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.::..........::...:....x.xx.x...x:..........:.:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -71475015 -22755387 +3132 chr4 + 190214555 4560669 4560668 4560737 69 AATGCTTTGATGAAGGGAGGCAAAAAAACAAAAACAAAAACAACAACAACAAA-AACCCCACAACGATGT chr4 + 94230402 26397799 26397798 26397868 26397799 26397798 26397868 70 AGTGCTCAAATGGAGGGGGGAAAAAAAAGGAAAACAACAACAACAAAAACGAACAACCAAAGAATGAAGT .:....:x:...:....:..x.......x:.......x........x...:..-....xx.x..:..x.. 53M1I16M 52/69 75.4% 70/94230402 0.0% 1/69 1.4% -21837130 -72393272 +3201 chr4 + 190214555 4569535 4569534 4569598 64 CCACCTTTCACAAGTGTTTTGCGCTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTCA chr4 + 94230402 37981906 37981905 37981969 37981906 37981905 37981969 64 CTATCTTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTGCTTTCA .:.:....xx::...x...xx:.:...x.....:.................x.:...x:..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -33412371 -60818031 +3002 chr4 + 190214555 4578943 4578942 4578997 55 ACAAAGAGAGTGACAAAAACAAAAAACAAACAAACAACAACAACAACAAAAACCC chr4 + 94230402 12866360 12866359 12866414 12866360 12866359 12866414 55 ATAATAAAAACAAAACAATCAAAAACCAACCAAGCAACAACAACAACAAAAACCC .:..x:.:.:::.x.x..x......x...x...:..................... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -8287417 -85942985 +3049 chr4 + 190214555 4578955 4578954 4578994 40 ACAAAAACAAAAAACAAACAAACAACAACAACAACAAAAA chr4 + 94230402 66076812 66076811 66076851 66076812 66076811 66076851 40 ACATGAACAGAAAAAAAACAAACAACAACAACAACAAAAA ...x:....:....x......................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -61497857 -32732545 +3325 chr4 + 190214555 4578958 4578957 4578995 38 AAAACAAAAAACAAACAAACAACAACAACAACAAAAAC chr4 + 94230402 79648968 79648967 79649005 79648968 79648967 79649005 38 AAAACAAAAAACAAACAAACAACAACAACAAAAAAAAC ...............................x...... 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% -75070010 -19160392 +3038 chr4 + 190214555 4578964 4578963 4579000 37 AAAAACAAACAAACAACAACAACAACAAAAACCCAGT chr4 + 94230402 22215899 22215898 22215935 22215899 22215898 22215935 37 AAAAACAAACAAACAACAACAACAACAAAAAAACAGT ...............................xx.... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -17636935 -76593467 +3185 chr4 + 190214555 4600692 4600691 4600832 141 GTGACACAACCACACTGTAGCCTGTCTCAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAGAAATTCTAAACATAAATACTATCCCTCCCTTGTT chr4 + 94230402 71601004 71601003 71601138 71601004 71601003 71601138 135 GTGACAAAACAAT-CTGTA---CTTCAGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGGTTAGCTGGTTCTAA--GTAAGCAGTCATTCTCCCATGTT ......x...x.:-.....---:x..xx:....:..:...:...x......x:..x..:x:.:...:.:x:..x.x...x.x........::..::.....:xx::xx::......--:...::.x.xx::.....x.... 13M1D5M3D94M2D23M 86/135 63.7% 135/94230402 0.0% 6/135 4.4% -67000312 -27230090 +3411 chr4 + 190214555 4612915 4612914 4612988 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAGCCTGGGAGTGGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.......:..::.:..:xxx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -71420289 -22810113 +3058 chr4 + 190214555 4614418 4614417 4614465 48 CAGTTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTGTTTTTTG chr4 + 94230402 50433359 50433358 50433406 50433359 50433358 50433406 48 CAGTTCTTTTTATTGTTGTTGCTGGTTTTTGTTTTGTTTTGTTTGTTG .....:..x..:.........:.xxx..................x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -45818941 -48411461 +3056 chr4 + 190214555 4614421 4614420 4614462 42 TTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 90203145 90203144 90203186 90203145 90203144 90203186 42 TTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATT .....................x.....x....x......x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -85588724 -8641678 +3147 chr4 + 190214555 4616782 4616781 4616822 41 AAAAACAACAACAACAACAAAAAACCCAAAAATTAGTCAGG chr4 + 94230402 28248737 28248736 28248777 28248737 28248736 28248777 41 AAAAACAACAACAACAACAAAAAACCCAAACATTAATGAAG ..............................x....:.x.:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -23631955 -70598447 +3989 chr4 + 190214555 4616823 4616822 4616905 83 CATGGTGGCATGCATGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGACGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--....:.......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -71416374 -22814028 +7115 chr4 + 190214555 4627540 4627539 4627800 261 TGTTTTGCGGGTTGGTATTTGTTTAGCTGGCAGATGTGCTCTGCATGAACAAGTCAAGG---GTGTTTC-CATCCCTGATTGGCTCATCAGGAGGGGGATATAGAATCTGGGGGCAGTGGGATCT-TGACCTTGGAGGAGCAGGAGCTT-GAATGAGATAATTCTGCAGGTGCCTTGTGCGTGTATCTTATCTGAATTTTACTTCCTGCCTTGACATTTGGAAGTGCTGAGCAGTCCAGAGATGGCTCCCTGCATTAGAGTCCCTTG chr4 + 94230402 81636323 81636322 81636588 81636323 81636322 81636588 266 TATTATGGTGATTGATATTTGTTTGGGAGTCAAATTTGTTCTGCATGAAAAAGCCAGGGAAAGGGTTCCTCTTCTCTGATTCACTGAACAGAAGGTAATTGAAAGATCTCTTTATGGCAGGATTTACGACCCCTGAGCCTCAGTCGTTTTGAGCTAAATAATAATGCATTTGCATCGTAAGTGTATCTAATTTGAATTTCACTTCCTGCCTAAACACTTTGAAAAGATGCAT-GCCTTGAGGTGTCTGCCTGAATAAAATTCCTGTG .:..x..xx.:...:.........:.xx.x..:..x..:..........x...:..:..---.x...:.-.x..:......x:..x.x...:...x::x.:x.::....xxxx:::.::....:.-:....::x...xxx...xx.:..-..::x.:.....xx....xx...x.:..:x........x..:.......:...........x:...:..x...:x.x..x::-.:.:x...:..x..x....x..x.:.x...:x.. 59M3I7M1I55M1I23M1I82M1D34M 170/260 65.4% 266/94230402 0.0% 7/260 2.7% -77008783 -17221619 +3085 chr4 + 190214555 4635087 4635086 4635146 60 CTTTAAGCTATGAGATTTTTTTCTTTTTCTTTCTTTCTTTCTGTCTTTCTTTCTCTTTCT chr4 + 94230402 7886816 7886815 7886875 7886816 7886815 7886875 60 CTTTAAGCTTAGAGATTTTTTTTTTTTCAATTTTTTTTTACAACTTTTCTTTCACTTCCT .........xx...........:....:xx..:...:..x.x:::........x...:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -3251729 -90978673 +10516 chr4 + 190214555 4641892 4641891 4642391 500 TCACCTTTAACCAG---TTTCTTTCAGGCGCGCAGATGGTATTTCAACTTCAGAGGGAGCGACAGAGTTGGGGGGCCTTTATGGATCTGTGACCCCCGGCTC-TTTGAGTTGCACAAACTAGCTCTCCCCCACCCCGGTCCAGCGGCTGCCAGCCCCAGCCCCCTTCAAAGGCCGGCTGGGTGC---CACGCAGCAATTTCCGCTGCCG-AATCTGACAGTGACAGTTCA---CTGGGACCTTC------TCTCGCTCTCTCTCTCTGTTCTCCGTGCTGGGGCCTTCTCAACTTTAAGTCTGATAGGGTCTTGTCACAAAGTCTGGCTGGAATGGGCTGAAGGGAGACAGAAACTGATAAATTTTCTTTTGATCTCAGATCTGCAAAGCCGCTCAGAAAAAATAAATCGCAA---CAGTGGGCCCACGGTGGTTGGTCAGAGCCAGAGAAGCCAGAAAAGGTTCCTTCTCCAGCTCAGGGTTCCCTGATTCCCCCTGGTACATTACATATCAAAAGGAG chr4 + 94230402 81644377 81644376 81644861 81644377 81644376 81644861 485 TCACCTTTATCCACAACTGCCTGTAACACAAGAGGATGCTGTTTTAACTTCAGAG------------CTCAAGGGTCTTCAGGGGCTTGGGACCCTGGAGTCATTTGAGCTGGACAAACCAACAATC----AAGGGAGGCCA-CAGCCTCTGGCACC--CTACCTTCAAAG--CATCTGGGGGTGCTCACACTGTGATTTCCTTCTCCATAATCTGGCAGTGACTGTGTAGCCATGGGACTTTTCTGTTTTCCTCTTTTCTTTCCCTGTTCTTGATGC-----CTCTTTCAGCTTTAAGGCTGCTACACAGTTGTCA-GAAGTCTGGCTTCAGTGGTCTGAAGGGAGACAGATACTGATAAATTTCCTTTTGATCTCTGCTCTGCAAAACCACTCGGTCAGAAAAAATAGAAGGGTCTGTGTGCGTA--GGGGTTGG--AGGATGTGAAAGGC---AAAAAGCACCCTCTCATGCCAGAGCGAGTCTAACTCCCACT-TCACATTAGATCTGAAAGAGGG .........x...x---.x:..x.x.x:.:x.x:....x.:...:..........------------:.x::...:...:.x..:::..x.....:x.:x..-......:..x......:.:.xx..----.xxxx:.x...-.:..:x.::..x..--.:x.........--.:x.....x.:---...:.x.::......x::x..:-......:.......x..x:.---x......:..:------..::x:.:...:..:.......:x:...-----.::.:...:.......x...x..x:xxx......-:..........xx.:...x...............x............:...........x.x........:..:...:.xx.:..x....x.x.:---.x...x..x:.--.x......--..:::xx..:.:..---....:.:x..:....xx..:x::.xxxx:..:.:....x..-x:......x..x.x...::.:. 14M3I38M12D35M1I24M4D11M1D14M2D12M2D11M3I22M1I20M3I11M6I28M5D34M1D95M3I11M2D8M2D14M3D41M1D22M 317/465 68.2% 485/94230402 0.0% 55/465 11.8% -77002485 -17227917 +3576 chr4 + 190214555 4644977 4644976 4645059 83 CATGGTGGTGTATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCACTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:.:.--...:..:...........::........x:xx.x.:.x.......:.....:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -71388220 -22842182 +3863 chr4 + 190214555 4648006 4648005 4648089 84 ACATGGTGGTGCGTGCCTGTAGTTCCAGCTATTTGAGAGGCTGAAGTAGGAGGATTGCTTGAGCCCAGGAGGTTGAGGCTACAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.......::.--..............:....:.......:x:xx.x.:.x::.....:.....:..x..x:....::.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -71385190 -22845212 +3059 chr4 + 190214555 4648087 4648086 4648125 39 CAGTGATAGACAGAAGTTTTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 49483907 49483906 49483945 49483907 49483906 49483945 39 CAGTGATAGGCAAAGTTTTTTTTGTTTGTTTGTTTGTTT .........:..:.:x....................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -44835820 -49394582 +15638 chr4 + 190214555 4666273 4666272 4667369 1097 CTGTTTGCATTTCTTGACAAAGGAAATTTGTTGGGCTTAAGTTGCCAAGGGTTT-GCATCTGGATCCTATGATGTTTGGCTTTGGGAGGGCTGTGCGCAGAACTGGCTCTGGGGCCTCCA--CCGGCCTCCATGTAATTAACTTAAGTGCTTCGAAGATGAAAGCTTATTTGCCTGATCCTGGATTATGGCATGTGCCGTGAAGGTAGGCAGAGCAGACCTCGCCAGTTATCTCTCGCTATTGAAGTTTC-----CAAAGAAACCAGTGGTGGACAGTGGAAGTCAGGAAGTTTGGGCATGTTGGAATTTATTAAATTTGCAGTTAAAAAAAA--AAAAAAGTT--CTGGTTGCCAGCACAAAGAGGTTAAGTGGAA--ACAACTTTACATAATGAAGTGGTTAATCATATTTTGCTTTAGAAACACTAATATCATAAATTGGCCTCATACTTTTGTGCTTCCAGTTTCAACAA-TAGAGC-------------------------------------AAAGACATTAATTTCCTGGTT-----------------------TGGTA---------TAACTTCTGGGATTTTCCTTCTGGGCCTCCTC----CTCCTTCTCCTCCCTTCTCTCCCCCCT--------------------------------CAGCTG--------------GAGTGA---------GGAAGATAGCTTTGATCCTAGATGCTCTGGAGGCCTGGGGGAGGTGAAAGG-----------------GGGGATGGTG--------------------------------------------------AGGATTC---------CTACAGGTGATTTTTAG--GCCTGAATTCCATTG--TGACAG---------------------------CAATGAT----------TTATTTTAACT----------------------ACTAACCCAGGAAAGCAGGCGCCACCAG---GATGAATACCTCCATCAGCTTCTAGCAGACTAATTTTACTGTTTATGAATCACTAATATGTTTAAGAAAAAAAAAGGGAGTACTATTTTAGATAACTAAAAGTAAGACTTCGAGAAAAGACCTCATGGTGCTCAAACAGTTCCACATGGGAAAGATGACTTTGGATTACAAG--ATAGAGAACACA---TGGGGTCCAGAGAGCTGCCCCCAACCTCCGCAGCAGGCAGAGGCTACTGGCAGATGAAACACTTTCATCTCTCCCAGGGAGATAAACAGGCCGGTCTGGATGGGCCTCTTTATTTACAAAAGAAAATTAAATCCGTTTTAACACTTGCACCATTCATAGGAAACACATGTTGGCTGGTAATTGTTTTGAACTCATTTT chr4 + 94230402 81651500 81651499 81652813 81651500 81651499 81652813 1314 CTGTTCATGTTTCACGCCAAGGCAAATTTGTTAGACT-AAGTTGCCATGTTTTTTGCATCTGGATTTTATGATGTTTGGCTTTGTAATGGTTGTATATAGAACCAATTCCAGCACTTGAGATTCTGGCTAAATATAATTAGTTTAAGTGCCTAGAAGATTAAGGTTTATTTGCTTTATACTGGATTAAAGTATAAGTAGCAAAGGTAGTATGAGCAGACCATGTGAGTTTCCTCCAGCTATTCAAGTTCCAATGACTTATACACCAACACAGGACAGTGGTGGCCAGGAAGTGCAGGGATTTTTGAATTTATTAAATTTGCTGTAAGAAAACATCAAATAGGTTAAATGGTC-------TAAAATAGTTAAGTGAAACTGCAAC-TTGCATATTGATTTTTCTAATCATATTT---CTTAGAAA---TTTTATCACATATGCATATCATATGTTGGTGGTTGGAACTTGAACAGCCAAAGCATGCTGCGAGGTTTTTCTCACCTTCTGTACTGAAGAAAATAATACTAATCTCACTGTTGTAAGAGTTAAAGGTTAAGAAGATGGAAGTGTGCAGGTGATTATTGGGATTATTTAACACTGTCTCATTAATGATTTGTTTAGACCATtggccttccaatacttgaagggagcatataaacagaaaggggtacagctgtttacaagggtggatagtgataggacaagggggaatggttttaaactgagacg----ggaagtttaggttagatattaggaggaagtttttcacacagagggtggtgacacactggaacaggttgcccaagaaggttgtagatgccccattgctggaagcattcaaggccaggctggatgtggctctgagcagcctga--tctagtggttggcaaacctgcacatagcaggagattgaaactaaatgatcattgtggtcttttttcaactcaggccattctatgattctatgattAGTGCAGGAGAGCAAATACTGCAAAACTGATAATTAAGTTC--CAGACTCTAGCAACCTACTTTTACTTTTTATTAACT----ATATGCTAA--------------AGTGCAATTGTAGTTAACTAAAACTAAGAT----AAAAATAAAATCAGAATGA-CAAGGAGTTCCATGTGTGAAAAATAACTGTTGATTACTAGGTGTGGAGAACACACAGTGAAATTCAGACTTTTT------------------GGCAGAGTCTACTGGCAGATGAAACACTT-------TTCAAATGAGATAAATGTACATGCTTGGATGCTATTCTTTATTTCCAAGATCAAATTAAATCAGTTTTAATAATTCCA-TATTCAT-GTGAACATGTAAAATCTCACAATCACTTTGAATTCTCTTT .....::::....x:.x...:.x.........:.:..-.........x.xx...-..........::.................x:.x..:...::::.....::::..::.x:.:.xx:--:.x.x..xx..:......::........:.x......x..:.:........:.x..x........x:.:..:x.:x.::.......xxx.........x:.:x....x:...:x......x.....:.-----.xx.x.x....:::xx.........x:.:........x::..x..x..x.................x..x.:....x.--...x.:...--x....:-------:...:x:........:..--:....-..:....x...xx.xx:...........---:.......---.xx.....:.x..xx::x.....:x..x...x..xx.::..x....:-:.:...-------------------------------------..x:.:.:....:..x:x...-----------------------...x.---------.:.:.x:.......x.::xx.xxx.:...x.:----x.::x.:.xxx..x..xx.:::..xx.--------------------------------......--------------x.....---------..:::..:.:...:.x.:x...:.----...:.::.:..xx..:.:xx...-----------------.:..:.....--------------------------------------------------..x....---------..:x.x...::.:.x..--......--..:.x..--..:..:---------------------------x......----------..x...:....----------------------.:..::x.....:....::::.::.x.:---...:.x..xx.:.--...x:.......:x...x.......x.....x..::----.....:.x.--------------...:.x...x...x.........x.....:----.:...x:.xx...x::..x-...:x.......::..x....:..:...x.x......x..--:.:.........---..:::.:....xxx:.x------------------.......x.....................-------.:.x.:x........::x:.xx.::......xxx:.........x...:.xx..........x.......:.x..x..-:......-.x:....::.:xx:x..x::...:::......:..x:... 37M1D16M1I65M2I128M5I78M2I9M2I6M7D18M2I5M1D28M3D8M3D47M1I6M37I21M23I5M9I32M4I27M32I6M14I6M9I24M4D23M17I10M50I7M9I17M2I6M2D7M2I6M27I7M10I11M22I28M3I13M2D36M4D9M14D30M4D19M1D40M2I12M3I17M18D29M7D78M1D7M1D40M 702/1024 68.6% 1314/94230402 0.0% 363/1024 35.4% -76985227 -17245175 +6899 chr4 + 190214555 4675706 4675705 4676131 426 AAATAAAGATCAAATTTCTCTGCCTCC--TCCCACCTCCTAGTTTGCACCATGTTAT------ACTTTCAATTGTTACTGTGGAGTTACAGTTTCACCAAGGAGCCTCCCCT------------GCTTTTGTTCTTTCCTAA--GCAGGTGGGTTGGTGAGGTGGCTGCCTGTGATTCTAGTGGCTTTTATGGGGGCCTTTG--GCAGAGGAGGAGTTTCTGAGCTCTGAAATATCTCCTTTTGT---AGATAGCATCTTGGGCCTGGAGCTAAGAGAATTAAGAGGTATTTACAATGATTTACAGCAAATGTTATACTATGTTACAGTCTCACTTTGTCCTGAAATT-TGTAAGGCAAGATCTGGTGTGCGTGTGTGTGTTTTAATGTAAGCATA--------ATGATAGGCATATTATATG---GGGGTATTTCTATAAAAAGTAGAAAACAAC-TATAATATT chr4 + 94230402 81661516 81661515 81661957 81661516 81661515 81661957 442 AAATACAGATTAAATCTCTTCGTCAAAGATTAAAACCCCT-GTTTGCACTGACTTATGAAAATACATTTAACTGTTATTAACAGACTTTAATTGCACCAATATGCTTTTCACTTCTTTAAAAAGGCCTTTGTTCTTCACAAATAGCAA------TACAAAGGTAACAG--TAATACTTTAGTGGCTTTTACTG----CTTGGATGCAAAATAGGAGTCCTTAAGCTTTAAAA-ATCTTTTTCTCTCAGAGATACCATCTTTTGCCTGGAGCTAAAGGAATTAGGGGATATTTAC-ATGATTTAAGGCTAATTTTACAGCATATTATGTTCCCTCTCTGCTATGGAATCACATACTAAAGGATTTGAT---------TTTTTTAAAATGTAAATAAAGGTAAAATGTAATAAAACTATTGTTTGTATGGGAAATTTCCATGTTAATCTGGAAACAATATTCAATATT .....x....:....:...::.:.xxx--.:xx.x.:...-........::xx....------..x..:..:.....:.:xx::::.x:.:..x......x:x..:.::.x:------------..:.........:x.x..--...:------.:xx:....::.x.--.:xx.:.:............:x.----...x.--...:.:x......:::.:....:.:...-....::..:.x.---.....x......xx............::......:.:.:.......-........x:..x...x...:.x:..:...::x..:.x..:..::x..:...:-::..xx:x.:...:..:.---------.x.x..xx.......::.x.--------:.:...::xx....:.x..---...:x.....:..:xx..x:x.:......:-.x:...... 27M2I11M1D16M6I49M12I18M2I4M6D14M2D23M4D5M2I28M1D12M3I46M1D53M1I18M9D20M8I19M3I30M1I9M 264/402 65.7% 442/94230402 0.0% 64/402 15.9% -76985810 -17244592 +3040 chr4 + 190214555 4677506 4677505 4677557 52 TTTCCCAGTGCCTTGCCTTCCTCCCCACCAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 57999177 57999176 57999228 57999177 57999176 57999228 52 TCTGCCAACTCCTCCCCTCCCCCCCCCCCAAAAAAAAGAAAAAAAGAAAAAA .:.x...::x...:x...:..:....x..........:.......:...... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -53321671 -40908731 +3090 chr4 + 190214555 4686540 4686539 4686598 59 TTTACAGTTGAGGAAATGGAGGCACAGAGAGGTTAAGCAACTTGTTCAAGGTCACACAG chr4 + 94230402 33545654 33545653 33545712 33545654 33545653 33545712 59 TTTACAGAGGAGGAAATGGGGGCACAGAGAGGTGATATCACTTGCCTCAGACTGCACAG .......xx..........:.............x.x::x.....:::x..::::..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -28859114 -65371288 +3838 chr4 + 190214555 4690557 4690556 4690639 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:.........:.::........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -71342640 -22887762 +3032 chr4 + 190214555 4691316 4691315 4691365 50 TTTTCTGGGTTTTGTTTCTCTTTCTTTTTCTTTTCTTTTCTTTCTTTCTT chr4 + 94230402 37944949 37944948 37944998 37944949 37944948 37944998 50 TTTTTAAGGTTATCTTTCTCATCCTTTTTTTTTTCTTTTCTTTTTTTCCT ....:x:....x.x......x.:......:.............:....:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -33253633 -60976769 +7062 chr4 + 190214555 4696631 4696630 4696855 225 GCTGTGGGAGGCAGGCACGG-GAGCCACAATTAATTTCTTTTACCACCAAGCAGCAGGCATCAAGCCTCATTACCCTGATGAGTCCAT---GAGCCGGGGGATTTGTGTAATCTTGTTTTCCCTCCAGCCGGCCTCCCGGAACGCCATTGTGCTGGCACTGAAGCCTCAGTGACCCCACCGAATTGCCCGTGCCCGACGGA-AGCCTTGCCTCACTAAGCACTGTCTGCT chr4 + 94230402 81667619 81667618 81667848 81667619 81667618 81667848 230 GCTATGACAGAATGGTATTGTGAACCACAATTAATTTCCTTTACAATAGTGTGGATAACTTCATGGCTCATTAGACTGATGATTTCATTCTGAATTGTTGGACTTGTGTAATCTTGTTTTCTCTTCAGCTAGCTTCCCAGGGTCTCATTGTCATTGCTGTGAAGCCTCAGTAATTCGATAAAATTCTCCTCATCAATCTGATGGCCATGAATTAGTAAGACCTGCCTACT ...:..:x..:xx..:.:x.-..:..............:.....x.:x:x.::.xx::.x...x.x.......xx.......x.:...---..:::.xx...:..................:..:....::..:....:.:::x:......xx.x..xx............:.::.x.:x:....x:..x:::.x:x.x..-:...x..xx.:.x....xx...:..:.. 20M1I67M3I110M1I28M 147/225 65.3% 230/94230402 0.0% 5/225 2.2% -76970988 -17259414 +3688 chr4 + 190214555 4700964 4700963 4701121 158 TACTCTGTCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACA--------CACACACACACACATATGACATTTTCTTTGTCCACTTGTTCGTCGATGGGCACTTAGGTTGGTTC--------CATATTTTTGCAATTGCGAAT chr4 + 94230402 79265506 79265505 79265677 79265506 79265505 79265677 172 TATTCAGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAA-ATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGT ..:..x....xxx:............::........xx........:...:..:::::.....:..x...:.--------....-....x:x:....:.-..x:x.....:.:x:...xx:..xx.x:x...:..xx..x:..x.--------::.....x.:..x..::..:. 72M8I4M1D14M1D45M8I21M 102/156 65.4% 172/94230402 0.0% 18/156 11.5% -74564542 -19665860 +3425 chr4 + 190214555 4700967 4700966 4701051 85 TCTGTCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATA chr4 + 94230402 85834528 85834527 85834612 85834528 85834527 85834612 85 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .:.x.:..x:..x.....x.................:.xx..:..x::.:...:.:::.x.:...:::x:.::......:...:. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -81133561 -13096841 +3293 chr4 + 190214555 4700970 4700969 4701051 82 GTCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATA chr4 + 94230402 85834527 85834526 85834608 85834527 85834526 85834608 82 GTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..:x.x...x::.x.....x...............:...xx..:..x:..:...:.:::.x.:...:::x:.::........ 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -81133557 -13096845 +3642 chr4 + 190214555 4700971 4700970 4701050 80 TCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACAT chr4 + 94230402 85834536 85834535 85834615 85834536 85834535 85834615 80 TCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ....x.:...x.................:.xx:.:..x::...:.:.:::.x.:...:::x:.::......:........ 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -81133565 -13096837 +3359 chr4 + 190214555 4700974 4700973 4701051 78 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATA chr4 + 94230402 85834533 85834532 85834610 85834533 85834532 85834610 78 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x::.x.....x...................xx..:..x:..:...:.:::.x.:...:::x:.::......:.:. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -81133559 -13096843 +4000 chr4 + 190214555 4700975 4700974 4701063 89 ATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATATGAC-------ATTTTCTT chr4 + 94230402 85834538 85834537 85834633 85834538 85834537 85834633 96 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTT ..x.....x.................:.xx..:..x::.....:.:::.x.:...:::x:.::......:.....:...:.-------........ 81M7I8M 64/89 71.9% 96/94230402 0.0% 7/89 7.9% -81133563 -13096839 +3079 chr4 + 190214555 4700976 4700975 4701033 58 TATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACA chr4 + 94230402 79265520 79265519 79265577 79265520 79265519 79265577 58 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .:..........::........xx...:....:...:.::::::.....:..x...:. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -74564544 -19665858 +3136 chr4 + 190214555 4700976 4700975 4701027 52 TATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA ..........::.:::.:..x:...........x.:.x......:....... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -40114624 -54115778 +3563 chr4 + 190214555 4700979 4700978 4701037 59 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx.:......:......:::::.....:..x...:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -74564540 -19665862 +3452 chr4 + 190214555 4700981 4700980 4701039 59 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx.:......:.:....:::::.....:..x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -74564538 -19665864 +3413 chr4 + 190214555 4700987 4700986 4701035 49 GTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACA chr4 + 94230402 68837095 68837094 68837143 68837095 68837094 68837143 49 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:.............:.:.:.x.....:...:.....::...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -64136108 -30094294 +3305 chr4 + 190214555 4721469 4721468 4721541 73 AGCCAAACTGGTTTTTTGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAAGTAACAGGCTATATGTTTTAGAGCA chr4 + 94230402 42184846 42184845 42184918 42184846 42184845 42184918 73 AGACAGCCTGGACTTCTGTGTTTTTTTTTTTGTTTGTTTGTTTTTAATTTTAAAGGTTGTATCTTTTTCAGCA ..x..:x....x:..:...x...x...x.................:.xx.x.x...:.:...x....xx.... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -37463377 -56767025 +19406 chr4 + 190214555 4735129 4735128 4735461 333 TCCTGCCTTTTAAAGAGACTTCTCTTCTTCTCTCCACCCCCTTCTTCTTTAGTAAGTAGAACCATTAGTTTTTATTGACGGGACTAATGCTTTTCATTTAGGGCCAATTACAATAGGAAGGGAGACGCTTAAGGGTAACTGGGTGATGAAAGGCCCCCATTAGGGAACAAGCTCAGGAGCTGCTGTTTCCCATTTGTAATGCTGGTTCCACATGCGAGTCATATTTAAGCCATAAACGGTGGCGCCCAGGGAG--CACTCGTGGATTGCCTTGAGAAACCCGATACTTTTATCAAATCTCCAGATGGCTGTGTATTTGAGAAACCATTTATTTAA chr4 + 94230402 81680605 81680604 81680917 81680605 81680604 81680917 313 TCCTTTATTTTAAATATACCTCTCTTTTTCT----------------------AAGTAGAACCATTAGTTTTTATTGATGGGACTAATGCTTTGCATTTAGCCCAAATTACAATAGGAAAGGAGATGCTTAAGGGTAACTGGGTGATGAAAGGACTACATTAGTGTACAAGTCCAAAGGCTGCTGTTTCCTATTTGTAATGCTGAATCCACATGCAAGTCATATTTAAGCTATAAACGGTGGCGCCTAGGGAGTATATACTCAGATTGCCTTGAGAAACTAAATACTTTTATCAAATCACCAGATGGATTTCTGTTCAAAAAAACACTTTCTTGA ....x:x.......x.x..:......:....----------------------.........................:..............x.......xx.x..............:.....:...........................x.:x......x.x.....::..:::............:.............:x.........:..............:...............:......--:.:x.x::................:x:................x........x.x.x.:..::.:...x..:..x:..:. 31M22D200M2I80M 259/311 83.3% 313/94230402 0.0% 24/311 7.7% -76945476 -17284926 +6272 chr4 + 190214555 4743861 4743860 4744050 190 TCCCCTGGGACACTTACCTTTTGTGGTACATCAGGGTCTTGAATGACTACAGCGTGAAAATGGCAAAGCAGACATTTTTCCCAAGCTCCGTCCTCAAGGCACAGAGGAATTTTAAATGGCTCTGGGTTGGGGTACTTGGCATAATTTGCAGCACTAAATCCAAAACAGATTTGAGCAGCCACAGCCACAG chr4 + 94230402 81684163 81684162 81684346 81684163 81684162 81684346 184 TTTCCTTATACAATGACTTCTAGTGATTCACC---TTTTTTAATGAGAACAGAAGGGAAACAGCAAAGAAAACATTTCTCTAAAATGTTTTCAGAAAGACCCACTGGAATTTGAAATGGGTCTTATTTGGTGTACTTTGCATAATTTGTTACACTAAATATGAAACAGATTT---CAGCTGCAGCTGTAG .::...x:x...x.x..:.:.x...:.x..:.---x.:..x.....xx....x:x.:...::......x.:......:..:x..::x::x..xxx...:.x..xx.......x......x...x:x....x......x..........:x:........x::..........---....::....:::.. 32M3D137M3D15M 124/184 67.4% 184/94230402 0.0% 6/184 3.3% -76940302 -17290100 +3476 chr4 + 190214555 4748710 4748709 4748803 94 CATGGTGGCATCCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCTAGGAACTCAAGGCTTCAGTAAACTGTGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT---GTAGAACATGAT ..::....--.x...x......:...........::........x.xx.x.:.x::.....:..:..:.:..:x:....---...:.x::.... 8M2D69M3D12M 63/89 70.8% 89/94230402 0.0% 5/89 5.6% -71284487 -22945915 +15240 chr4 + 190214555 4753155 4753154 4753477 323 CAAGTCTGTGGCCCAGGCAGGCAAGGAGTAATATATTAGCTCCGTTGGTTTAACTGGACAGCAGCATGAGCTTGTAATAAGGATGTGGTAATACACCACGAG-AATCTGTAGGCTCATAAAACTTGACCTTATAAATCTCCAAGTGTATCAATTCCATACAGCAGCCACTCCCTGCAGTGGAAGCCACAGACTTATAAAGTGGCCGTTGATAACAGAACAGTTTACCCCCAACCCACCTCCCTTCTTTAAAACTCCCCAAGACAGACTAATCAGGGCACATTCATAAT-TCCTCCTGAAACAGGAATGCCACATCAAAACACACA chr4 + 94230402 81689276 81689275 81689583 81689276 81689275 81689583 308 CAACCCTGAAGAACAGAGCAGCAAGT-GTAATATATTACCTCTGGTGGCTTAGCTGGACAGCAGCAGGGGCTTGTAATAAGGATGTGGTAATACACCACAAGGAATCTGTAGACTCATAAAACTTGACCTTATAAATCTCTGCGTTTATCAATTCCATACAGCAGCCACTCCCTGTGGTGGAAGTCTCAGACCAATAAACCTGCAGTTGATAACCATACAATTTATCCTCAATTTTC--CCCTTC--------------AGGCCACCTAATCATGCTACATTAATAATGTCTGTAAAAAATTGGAATGTCCCTTAAAAACAAATA ...x:...x:.xx...:xx:.....x-...........x...:.x...:...:.............x.:..............................:..-.........:...........................::x..x.............................::.......:.x.....:x.....x:x..x.........x:x...:....:..:...:::x.--......--------------..:.x:x.......x.x:.....x.....-..:x:xx:...:x......:.x.x.x......x.:. 26M1D75M1I134M2D6M14D29M1I36M 240/306 78.4% 308/94230402 0.0% 19/306 6.2% -76936121 -17294281 +3168 chr4 + 190214555 4755080 4755079 4755131 52 GGGGAGGAGGGGAAGTCTGGATCTGGGGTGGGGGTTGGCCGGAGGTGGGGGT chr4 + 94230402 1824500 1824499 1824551 1824500 1824499 1824551 52 GGGGAGGAAATAAAGCGAAGATTTGGGGTGGGGGCTGACAGGAGGTGGGGGT ........::x:...:xx:...:...........:..:.x............ 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 2930580 NA +17483 chr4 + 190214555 4759083 4759082 4759545 463 TCATGCTGGAAAACCTTTTTCTTCTGTCAAATTTCAAGCACTAAATTTCCTCAACATACTTTCGAAGGCTCGTGTTTTATCCGTTTTTAATTAACTCATTTTGAAGCTTTCATACTTGTCCCCAAAATATTTTCTTGGCATTTCATGGTCATTGTTTTCCTTGGGAAGGCCGCCGGTGCTGCGGAGGAGG-------------GTCACCGAGCAACATGGCTTGGCATTTGGACACGCTTTTGTTC-CCTTCTCCCCGCCAGGCCTCTCTGGGGCTC----TTGCATTTACTGTTAAAATATTACAGAGGCCCACACCCGAACGTCCATAATCCCCGGTGCTAGACTGTCTCTAATTGATTTAATTATTCATAATTGCTCAGCT-GGGCTTATGCATACTTGTGCGTGATT-ATAGTGAACAGATGGGTCTGTGGCGGATGATGTGTCCCTTCCTGATTAGCGGGTGGATCTGGAGTTTCTGG chr4 + 94230402 81695440 81695439 81695910 81695440 81695439 81695910 471 TCACGAAGGAAAACATTTATATGGGGT-GAATGTAAAGTTCTAA-TTAACTCAGCATATTTCTTGGGCCTTGCATTTTATCCTTTTTTAATTAACTCATTTCTAAGGTTTAAACCTTGTACA-GAAATATTTTATTGGAATTTCATTACCATTGTTTTCCTTGGGAAGGCAGTTTATAATCTTCATGATATTATTGTAAATCCATCACTAAGCAACATGCTTTGGCATTTGTATAAGCCTTTGTCCACCTCCTTCCCTCCA-----CCCAAATGCACACATTTGCATTTACTGTTAAAATATTATGGATGCTGACACCAGTTTAGCCACAAGACCTGGTGTTAGACTGTCTCTAATTGATTTAATTATTCATAATTGCTCAGCTGGGGCTTATGTGTACTTCAGCATGATTAAGGGAGAACATACAAGTCTGCAGCTAATGATGTGTTCCATCATAATTTACAACCG----TGAAGTTGCTGG ...:.xx.......x...x.x.xxx..-:...x.x...:x....-..xx....:....:..::x::.x..:.::........x..................:x...x...x.xx.....x.x-:.........x....x.......x::.....................x.::x:.:x.x:xx.x..x:-------------:....::.........x:..........x.:.x..:.....:.-...:..:...x...-----.:.x::x..x.----.......................::..x..:x.....x.xx::x...:..xx..:....:...........................................-.........::.....xx..:.....-.x:.x.....x.:::.....::..x:.........:..x..x.:...x:.::x:.----..:....x.... 27M1D16M1D77M1D67M13I43M1I14M5D11M4I103M1I26M1I55M4D12M 332/451 73.6% 471/94230402 0.0% 32/451 7.1% -76936357 -17294045 +3564 chr4 + 190214555 4759965 4759964 4760098 134 AGAAGCAAATTCCATCCCAACAAGATG---AGATATCATCAGCCTGAGGGTCCCCTAATTGTCCCCATACGAGTCTTCTTAATTAATTCAAGACAAGTAAATGATACGAGGCCTCATAGGCTTCGCGGGGCAGCTTC chr4 + 94230402 81696243 81696242 81696377 81696243 81696242 81696377 135 AGAAGCAACTTC--TCTCAATATGATACATGAAAATGATCGCACAGTGGTTTACTTAATTGTCACCAAACATGTTTTCATAATTAGTTCAAGACAAACTGTTCTGACAATGCCATGTACATTTTATGAGGCAACATC ........x...--..:...:.x...:---::.x..x...:xx.x.x..x.:x.:........x...x..:x..:...x......:..........::x:x.xxx..:.x...x::..x::..:::.:....:.x.. 12M2D13M3I107M 85/132 64.4% 135/94230402 0.0% 5/132 3.8% -76936278 -17294124 +30962 chr4 + 190214555 4761042 4761041 4761777 736 TGAACCTTGAGAGAGACGGGAAGGCAGCCGCAACCTCTGCGAACTGAAATGTATTGTCAGAAGGATGTAATTACAAGTATTTATGTACACTGATTCTGAACCAGAGAATCCCGGGATGGCTCTGGGGCCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAAAGAGGGAGAGAGAAAAAAAAGGCTT-AAAAACTCCTGACAATGAGCAATTCTTCATGGAACAAAACTATTACAATAGCCAGCCTTTGATCTTGCCCGTCTCCTGTTGCCAATTGTATTTTGTCACCATTGGACTGTCACCCGCGAGGGAGCACTTTTGAATTAAGCAGTCTACAGCAATTTAGTCTGCACTGGCTTTGAAGTGCCAACATCAGTCAGGCCAGGACTAACTTTTTTCATTAAAAATTTTTCAGCTTCTCTAAGGGAGCTTTTTGCCTTTTTTTTTTTTTTTTTTAAGCCTGCCGGGACATTTAGATAAGTTGAGCCTCCAACCCGTGGCCCCAAGACATCAAAAGGCGCGGGGTCCAGT--AATGCTGGAGGCAGCCATCACTAAGCCCTAATGGAGTGCTTCATTAAGATCGCTTCAAAGGCCCCCGTTTACAGACTCGGAGATTGACTAATTTACACATTGTGGGAAAATTGCTACCAGCTCTGCCCACACC------------CCAGCAGGGGGAGAGACGCCCTCTTTCTTTGAAAGGCAAGAACTGCAAAAGGCCCCTCTAATTGCAGACTGGCCTTT chr4 + 94230402 81696946 81696945 81697617 81696946 81696945 81697617 672 TGGACCTTTGGACAGAC---AAAACA--CGTAGCATTTA-GAACTGCAATGTATTATCAGAAGGATGTAATTACAATTATTTATTTAAGCTGGTTCTGAACCAGGGAATCCTGATATGAAGCTGGAGCCAGTAAAA--------------------------------------------GCTTGAAAAACTACTGACAATAAGCAATTCTTCATGGAACAAAACTATTACAATAGAGGGCCTTTGATCTTGCCTGTCTCCTGTTGCCAATTGAACTTTGTCACCAT-GCACTGTCATCCACAAGGGAGCACTTTTGAATTAAGCAGTCTACAGCAATTTAGTCTGTTCCAGCTTTGAAGTGCCAACATCAGTCAGGCCAGTACTAACTTTTTTCATTAAATTTTTTTTGAGTTCTCTTAGGAG---TTTAGCAGTCCT------------------------GGCATTTAGATAACTATAGTCAAAAAACCAAGGCACTAAGACATCAAAAGCAAGAGGGGCCCCTAAAATACAAATGTGAACAATCATTAGGCTCTAATGGTGCACTTCATTAATGTCCACTTCAAAGCAAAAGTTTACTGACTTTGGGATTGACTAATTTACACATTGTGGG-AAATTGCTGCCAGCCATGCATGTAACCACTAAATGTTTCTGGAATAAATAGAAACGCCCTCTTCCTTCAGAAATCAGGAACTGCAAACTGAGCCTTTAATTGCAAGATGGCTTTT ..:.....x:..x....---..::..--..:.:.x.:.:-......x........:....................x.......x..x:...:...........:......:.:x...:xx....:....:x....--------------------------------------------....-.......x........:..................................xx:...............:..................x.:...........-.x.......:..:.:...........................................:x.::..............................x...................xx.....:::x......x...::---...x..xx.::.------------------------.:...........x.xx..:.xxx..x..:x...x.:.............xx:x:...x..xx.--...:.x::x.xx.:.x....:..:..:.......x.::.........x:..xx:.:x..:..xxxx......x....:x.:.........................-........:.....:x...x:::.x.------------.::.x.x:::x...:..........:...:::..:x..:..........xx.xx...:........::x....:... 17M3D6M2D11M1D96M44D4M1I102M1D136M3D12M24D64M2I106M1D26M12I77M 513/657 78.1% 672/94230402 0.0% 94/657 14.3% -76935904 -17294498 +3014 chr4 + 190214555 4761166 4761165 4761207 42 GGGCCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAAAGAGGGA chr4 + 94230402 75300450 75300449 75300491 75300450 75300449 75300491 42 GGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...x.x..................:.........:....::. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -70539284 -23691118 +3328 chr4 + 190214555 4761178 4761177 4761235 58 AAAAAAAAAAAAAAGAGAGAGAAAGAGGGAGAGAGAAAAAAAAGGCTTAAAAACTCCT chr4 + 94230402 30221943 30221942 30222000 30221943 30221942 30222000 58 AGACAAAAAGATAGGGGAAAGAAATAGAAGGAAAGAAAAAAAGGGCTTTAAAACTCCT .:.x.....:.x.:.:..:.....x..:::..:.........:.....x......... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -25460765 -68769637 +16447 chr4 + 190214555 4763459 4763458 4763828 370 AAACCACTTAGCAAACCGCAAATTTCAGAGGCCTCGTCACATCTGCATTTTATCAGCTTTTTCCGGATAGTATTACCCCGAGCAATTGTCTGCAGATCGGCCGACAGCTGAGACGTTCAAGCTCTGAATTACGGAGAAAGGGCCGGAGATAAAGCCGAGCACATGTATCCCATCAAAGTAATGAAAGCCGCCTGCCGCCAGGACGCCCTGCTGCCTCCTTCCTAGCCGCCCTGCCGCCCCGCAGGAAGGCT---GATTAACCCTTGCGAGG-----CAGGGGAAGAAGAGCAGCGGTCATCCAATACTCAGGCTAATCAGGG-----------TCCCAAGAATG-GGAGGGAGGCAGAGGGGGTGGGCCGGAAAGAACAGCCATCGCAGA chr4 + 94230402 81698857 81698856 81699243 81698857 81698856 81699243 387 aaaaCACTTAGCAAACCACAAATTTCAGAGACCTAGTCACATCTGTGTTTTATCAGCTTTTTCCGGATAGTGTTACACCAAACAATTGTCTGCAGATCGGTAGACAGCTGAGACTTTAAAGTGCTGAATTACTGAGAAAATGCTAGAGATAAAAACCAGCACATGTATCCTATCAATGTAATGAAACCAACCTGCTGCTAG--CGCCATAGTGCCTTAGTTCTAAGTACCCTGTAGAGGAAC-GGAAGGCTTTCATTTAACTCTTAAGAGGAAAGCAAGGGAAAGAAGAGTAAAGGTCATCTAATACCAGCCTTAATCACTGAACTGAAATACTCTCAGATATATGAAGGGAGGAATGCTTGGTGTTCAAAATAAAACACCAACTGCAGA ...x.............:............:...x..........::........................:....x..:.:..................:x............x..x...:x.........x......:x..::........:x.x.............:.....x.........x.x:.....:..:..--....x.:x.....:xx.:...:x::.....:x.xxxx:.-........---:x.....:...:x....-----x....:........:.:x.......:.....:x:xx:......xx.-----------..:..::x..:-.:.......x.x:xxx....xx.x::.x.:....x.x.::..... 201M2D39M1D8M3I17M5I46M11I11M1I45M 276/367 75.2% 387/94230402 0.0% 23/367 6.3% -76935398 -17295004 +3533 chr4 + 190214555 4781368 4781367 4781424 57 TGGAGATTTTTGTTTGTTTGTGGGTTTTTGTTTTTGTTTGTTTTTTATTTTGGTAGC chr4 + 94230402 8115026 8115025 8115082 8115026 8115025 8115082 57 TGGGGATTTTTGTTGGGTTGTGGGTTGTTTTTTTTTTTTGTTTTTTTTTGAGGTAGC ...:..........x.x.........x..x.....x..........x..xx...... 57M 48/57 84.2% 57/94230402 0.0% 0/57 0.0% -3333658 -90896744 +3078 chr4 + 190214555 4783657 4783656 4783716 60 TGTATATATACACATACATATAAATACATATACACATATATATACACATGCAAAGAGAGA chr4 + 94230402 23247723 23247722 23247782 23247723 23247722 23247782 60 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAA ...:.:...:....:....x..x:x......::...:.:...:.....::...:..:.:. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -18464066 -75766336 +6543 chr4 + 190214555 4784545 4784544 4784741 197 TTCCCTGGCCCTCTCGGGCAGACCTGA--CAATCCC-------CACTGCTGCGGGGAGGCTCTGCCATCCTTGTGCTAATCCCATTACCCACAAATGAAGATGTAATCACAGCCCTTTCAAAGGGCTCCCAAAGCAGATCCCTCTTTGGAAAGAGAAAAGCAAGTGCAATTGTCCGAGCCACTGACTTCTGAAGCTCCTGCTGGGA chr4 + 94230402 81725974 81725973 81726177 81725974 81725973 81726177 204 TTTCCCGACCCTCTTGGGGTAATTTACACCAATCCTAAACTTGTATGTTTGTCTGAAGTCTCTTTTATCAGCGTGGTAATCCCATTACTGACAAATGAAGATGTAATCACAGTTTATTCAAAACG-TTAGAAAGCTTTATCCCCTTTTGAGAGAAAGGAGAAAGTACAATTGGCTGCA-AACTGACTTCTTAAACTCCTACTGGGA ..:..:.:......:...xx:.::.:x--......:-------:.:xx:..:xx.:..x....x::...xx:...x............:x......................:::x......:x.-.:xx.....xxxx:..:....x..:...:.::..x....:......x.:.x:-x..........x..:.....:...... 27M2I7M7I82M1D52M1D27M 134/195 68.7% 204/94230402 0.0% 11/195 5.6% -76941429 -17288973 +6669 chr4 + 190214555 4793526 4793525 4793892 367 TAGTGATGGTGGTGATGGTGGTAATGATGGGGGTGATGGTGGTGATGGTGGTGACGG---TGCTGATGGTGGTAGGAATGATGGTGGTGATAG---TGACGGAGATGATAGTGA---TGGAGGTGGTGGTGA------------------TTGTAGTGATGTTGATGATGGTAGTGAAGGCTGTGGTAGTGATGGTGGTGGGGGTGGGGGTGATGGTGGTGGTGATGGTGATGGTGGTGGTAATGGTGA------CGGTGATGATGGTGATGGTGGTGGTGATGATGGTGAGGGTGATGTTGG---TGGTGATGGTGGTGGTGGTGGTGATAATGGTGAT------AATGTTTGAGGTGATGGTGGTG------GTAGTAATGATGATGATGATGATGATGGAGGTGGTGGTGGT chr4 + 94230402 92132465 92132464 92132879 92132465 92132464 92132879 415 TGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGT .:.x..::x...x....x...:....x......:xx.:.x.x..x...x.::.xx..---..:...x.:::x.:......x...x.:x...:.---..x:.......x.::x..---...:.:..x...x..------------------:.x.:.x........x....x.:.x....x:x.:::..x..:x.:::x....::::.x..x....x...x.:..x...x..::x...x.:..x.x.x..------.:...x..:x.::xx:..x.:::x.x.x....x.....:x....x...---...x....x...x.:..x...x...:x...:...------..:.:.x...:::x...x..x.------.x:..:x..:x..::x..:x....x...:.:x.x...::.. 57M3I33M3I18M3I15M18I99M6I48M3I34M6I22M6I41M 228/367 62.1% 415/94230402 0.0% 48/367 13.1% -87338939 -6891463 +44233 chr4 + 190214555 4818008 4818007 4818714 707 CCATCAGCAATGAAGAATCAGGCCTTTACCAGCTGCGGGGGCCGCATAACAGTAAAG--CAGCATAATTATATCTTAATAATTATTTTGCAGCATAGGATTTATAATTACTAAATGTGTGATAACTGCTCCTTAAATGCCCATGCTCTTTAAAAAACCTAATTTATAATTTAAAAAGCTGACACTTCTTGGAGCGCTTTATTTTATCTTGTCGGGAGTAATGGAAGAGTAAGTTATTGAAAACCTTTATTTTTCATTAGCCTTAAATTCAATGACAATTAATGTGCCCAATTTGATTATAAACTGCACAAATTAAACAATAAAGAGCTGTCTAATGAGAAATTAATTATGAGGAAGGGAAGGGGAGCGGGGCGGGATAAAAGCAATCACTTATGGCCCGTGGCAGCATGTGTCAGGTTTTAAAGGAGATGAAGGGCCCTCTCCTCAATGTGTGTCTTTGCTGATAGGACCCATCACAGATCAGTTGATCCAGAAACCATAACAGCCTAGTAATTGAAACTGCCAAAATCAATAGTGCTGACAGCCTTAATTAAATTAAATATGGCTGTGATGGGCTCCCAGAGCCCGGCGTCTGCGGGCCACTTGACCCTCCGGCTGAG-CGTGCCTGATGGAGTGCAGC-CACCGCGTGATGGATCTCACCCCAGGGGACAGTTGGGGACCAG-GCTCCTGCAGACAGAGGCTCCAAAAGG chr4 + 94230402 81746349 81746348 81747057 81746349 81746348 81747057 709 CCACCAACAATTAGATGTTATGCAGTTAACTAACAATGAGGTGGAAAAAAACTAAGGGGAATTGTAAATATATCCTAATAATTGTATTGCAGCATAGGATTTATAATTACTAAATGTGTGATAACTGCTTCCTAAATGCCCATGCTCTTTAAACAACCCAATTTATAATTTAAAAAGCTGACAACTCTTAAAGTGTTTTATTTTATCTTGTCTGAAATAATTGAAGAGTAAGTTATTGAAAACCTTTATTTTTCATTAGCCTTAAATTCAACTACAATTAATGTGCCCAATTTGATTATAAACTGCACAAATTAAACAATAAAGAGCTGTCTAATGAGAAATTAATTATGAGGAACAGAAGAGGAGCTGGGCTGGATAAAAGCAATAAGTTATGGCCTATGGCAGGATGTGTCAGGTTTTAAAGGAGACAAAGGGCTTTTTCCTCAATGTGTGCCAGTGCTGATAGGGCTCATCACAGATCAGTAGATCCAGAAGCCATAACAGCACGGTAATTGAAACTGCCAAAATCAATAGTGCTGACAACCTTAATTAAATTAAATATGTCTCTGATGAGCTCAAACAGCATGGCA---GCGGACCACTTGACCCTTTCTCGGAGCCCCGCTTGATGGAGTGCAGCATGCAGCGTGATGGATGTCACCCCCAGGGCCGCCCGAGCCCTCGCGCTGCTGCGGGAAATTGCTCCGGGAGG ...:..:....x.::x:.:.x..xx...x.x:x::xx.:..:x.x.x..x.x...:.--x.x::...x......:........:.x...........................................:.:.....................x....:........................x:....::..:.:................x.:.:....x.................................................:x..................................................................................x:....:.....x....x.............x.x........::......x......................::......::.:.............:.xx..........:.:..............x.........:..........x::..................................:....................x..x.....:....xx.x...x:...:---....:............::xx.x...-.x:..:..............-::.x...........x.......x:...x.:x::.:.xx.:x.-...x....:.:x.:xx.....:::... 57M2I531M3D26M1I20M1I43M1I27M 583/704 82.8% 709/94230402 0.0% 8/704 1.1% -76928341 -17302061 +10654 chr4 + 190214555 4820253 4820252 4820512 260 TTGGTTTTCACCATAGGAAGCTCAACAAATAAATATCTTCACAGTTTGCTCGGCTGTCGGCAGGCTTGAGCTGACTTCTTAAATGACATGAAATAG--GCGGCTCGAG--TTCCCCAATGTTTATGTCAGCACTAACAAACTGTCCCTTCATTACAGGCCTGCCGGAGATCAGAGGCCCAGATTATTGAAGGAGACGCCTATGAGATGCCCAAGCGGTTGCTGTGACAACTCTGCTGGAGGGCGGGAGGCGGCGAGGGCGGGCA chr4 + 94230402 81747287 81747286 81747548 81747287 81747286 81747548 262 TTGTTTTTCTCGCTAGGAAATTGCACGAGTAAATATTTTTGCAGGATGCAGTTCTCTTGGCCATGCCGCGCTGACTTCCTAAACAACGTGAAACAATTGCACCTCTAGGTTTTCAAAATGTTTATGTCAGCATTAACAAACTGTTCCTTCATTATAAGCCTGTCAAAGATCAGAGGCTGAGATTATTGCAGTAGATTCCTTTCAAATACTGAAGTTGTTGCTGTGACAA--CTGCAGGAGAGAAGAGATTGTCAGAGGTGGACA ...x.....x.xx......::.xx..:.:.......:..::...xx...xxxx..x.:...x:xx::.x.........:....::..:.....:.:--..:x...x..--..:.xx................:...........:.........:.:.....:.::...........:x.........x..x...:x...x.x.:..:.:x...:x.............--....x....:.x:.:::x:.x.:::..:..:.. 96M2I10M2I119M2D33M 182/258 70.5% 262/94230402 0.0% 6/258 2.3% -76927034 -17303368 +5527 chr4 + 190214555 4838045 4838044 4838317 273 CTTTTCCTCTAGTTCCTTAATCAAGCCTTTTAACCCATGTAAGCTTATCCCCTATCTTGCAAATCGTAATCCTGACTCATTAAACCTCAGAACTGAATAGGGAATGGAAGTAGAAGGCATTTCTCTTTGAAAGGACTGAAGTGATAGCAGGTCTGTCTCAGGGGAGGGGCAAGGATGGAGAAAGAGACAAGTCCCAGCTGATGAAAGAGGCCAGGCGTAGCCACCCTCCCCCTCACAACT-GTGTCTCCAGGGAGCTCCTGGAGCAGGAATTAG chr4 + 94230402 81754900 81754899 81755151 81754900 81754899 81755151 252 CTTTCTCCGTCTTTCCTTAAAAGAGCATTTTGAA----AGGGGCTTATCCTATATCTAGCAAATTCTAATCCCTATGAGCTAAACTCTGGAAGCGGGGGAGGAATGTAGGTAGAAAGCTTTTCTCTTTCAAAGTCGGAGGGTAATAGCACGTCCTTTCTATTCCAAAGTC----ATAGTGA---AGACAAGTTCCTCTTGATGAAAGCGCACAGTTA--------ATCCATCTCAGGATTGGTGTCTCCATGCAGCACCCTG---GGGAACTAG ....::.:x.xx........xx:...x....:.x----:x::........:x.....x......:x......:x.:xx::.....::::...x:.::x::......x.:......:..x.........x....xxxx:::..:......x...:x.:::.xxxx.::.x.----..:.x..---........:..xx:.........x.xx...x::--------x...x:....x:.:.-.........x.x...x..:x.---:....:... 34M4D132M4D7M3D33M8D15M1I21M3D9M 161/251 64.1% 252/94230402 0.0% 23/251 9.2% -76916855 -17313547 +3764 chr4 + 190214555 4849375 4849374 4849463 89 GGATCTATTTTCACTTAATTGGACTGTGGCCAAGGGTCCAGCATTTGATCAGATAGGGGGTCTCCCCAGGGATGGAATCTTCCATCAGA chr4 + 94230402 81767514 81767513 81767596 81767514 81767513 81767596 83 GGATATATTTTCACATAATTGGGCTGTGTCAAGGTACTGGCCATTTGATCAGATAGGGGCTTTCT------ACGTAGTCTCACATCAGA ....x.........x.......:.....x.x.:.x:::x:x..................x.:..:------.:.x.:...:x....... 65M6D18M 62/83 74.7% 83/94230402 0.0% 6/83 7.2% -76918139 -17312263 +13873 chr4 + 190214555 4854791 4854790 4855009 219 GAGCCTCGGGGTCTGCCTGACATCTCCGGGCTTAAATAACCGTGCGCCTTTGTTATTCGTCAGCAGCAAAGTGGTTCGTTACGCCTGATTGGTCTAATTGCTTTGAAATGGGATATATTATCTATAATTATAGAGCTCTAGGA-GAGCCGGCCGGCCTCTCCTTTCATC-TTCCCAAGTGCACCCTCACGTCGCGATCACATTAATTTGGGCCATTTGAAA chr4 + 94230402 81771554 81771553 81771774 81771554 81771553 81771774 221 GAGTCTCGAAGTCTGCTTGACATCTTGAAGCTTAAATAACCGTAAGGCATTGTTACTCCCTGGCAGCAAAGTGCCTCGTTACGCCTGATTGAGCTAATTGCTTTGAAATAGGATATATTATCTATAATTATAGAGATCTTGGAGGAGACGGGTAGCCTTTTCTTTCATCTTTTTCAAGTGCATCATAATGTCGCGATCAAATTAATTTGGGCCACTTGAAA ...:....::......:........:x::..............:x.x.x......:..x:::...........x:................:x................:.........................x...x...-...x...x::....:.:........-..::........:.x.x.:..........x..............:...... 143M1I25M1I51M 181/219 82.6% 221/94230402 0.0% 2/219 0.9% -76916763 -17313639 +10638 chr4 + 190214555 4856851 4856850 4857099 249 GCCGGTGCTGCGGGGCC-AGGCGATTTGCTCCCCGGAGGCAGGGGCGCGACTTCAAGGGCCCGTGCGCCGGGTGCAGCCTTTGATCCGGCCGCCGCTGGCGCCTTAAAACAACATC-CTAGTCTGCCTATTAGGCGCGCTGAGGAATCGTGACACATTGTTTATCCCCGCAATTAGCGATGCGGCC-CTTTTCAG---GCCGCCCGCCCCCGGGCCCCCCGCCCCCCCCCCCCCCCCCGCGGCGGAGTCCAGGCC chr4 + 94230402 81773459 81773458 81773707 81773459 81773458 81773707 249 GCCGCTGTCCCAGGGCCGAGGCGCCTCGCTCCCCCGATGCGGGTTAACGTCCTCAATGGTCCC--CTCCGGGCCGCTCCTTTGATCCGGCCGCTGCTGGCGCCTAAAAACAACATCGCTTGTCTGCCTATTAGAGGCACTGACTAATCGTGACAGATTGTTTATTCTTGCAATTAGCGATGCAGCCGCTCCTCCGAGAGCTGcccccccc----cccccccccctcctccactcccgccctgccccgccccGGCC ....x..::x.:.....-.....x:.:.......x..x..:..xxx:..x.:....x..:..x--.x.....:xxxx................:..........x...........-..x.............:x..:....xx..........x.........:.::..............:...-..::..x.---..:....x....----......x...:..:..x.:...x.x.x..xxx.:..x.... 17M1I45M2D51M1I69M1I8M3I12M4D41M 186/243 76.5% 249/94230402 0.0% 12/243 4.9% -76916608 -17313794 +19579 chr4 + 190214555 4859497 4859496 4860419 923 CCTCCGCCGCCTGGGCCCTGCCCTG---CGTGCCCCCAGGCCCAGCGCGCCTCCGGGCGAGTCCCCAGGAGCGCGGCCCAATGGATCGCTCCGGGCCCGCCCCCTCGCGCGCTGATTGGCCGCCGCCCCGCTGGCCTCGCCTTATTAGCAAGTTCTCTGG---------GGAGCCGCGGTAGGGCCCGGAGCCGGCGAGTGCTCCCGGGAACTCTGCCTGCGCGGCGGCAGCGACCGGAGGCCAGGCCCAGCACGCCGGAGCTGGCCTGCTGGGGAGGGGCGGGAGGCGCGC-------GCGGGAGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCCGGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGGCTGGCCAGTGCTGCGGCA------GAAGGGGGGGCCCGGCTCTGCATGGCCCCGGCTGCTGACATGACTTCTTTGCCACTCGGTGTCAAAGTGGAGGA---------CTCCGCCTTCGGCAAGCC-GGCGGGGGGAGGCGCGGGCCAGGCCCCCAGCGCCGCCGCGGCCACGGCAGCCGCCATGGGCGCGGACGAGGAGGGGGCCAAGCCCAAAGTGTCCCCTTCGCTCCTGCCCTTCAGCGTGGAGGCGCTCATGGCCGACCACAGGAAGCCGG-GGGCCAAGGAGAGCGCCCTGGCGCCCTCCGAGGGCGTGCAGGCGGCGGGTGGCTCGGCGCAGCCACTGGGCGTCCCGCCGGGGTCG--CTGGGAGCCC------CGGACGCGCCCTCTTCGCCGCGGCCGCTCGGC---CATTTCTCG---GTGGGGGGACTCCTCAAGCTGCCAGAAGATGCGCTCGTCAAAGCCGAGAGCCCCGAGAAGCCCGAGAGGACCCCGTGGATGCAGAGCCCCCGCTTCTCCCCGCCGCCGGCCAGTGAGTAGCCAGAACCCAGGCGCAGAGGGAGGGGGCCGGGTGGGGGCCGGG chr4 + 94230402 81774511 81774510 81775362 81774511 81774510 81775362 852 CTCCCGACGTCTGAGCCCCACCCGGTGCCGTgtccccagccc------gtccccagcct-gtccccagcccgtccGCCCGGGCCTTCCCTCCGAGCGCAGCGCACCCCCCGCTCCCCA--CACCGCCCCGACGGCCGCGCCGCGCCACGCCGCTCCCCCTCCCTCTCCCGGGGCCGCCGTCGGGCC----GCCGTCG----CTCC-------TCAGCCAATGGGG----AGCGCCCG---------CCCCGCCCTCCTGCGC--GCTGATTGGGCGGCACCGCCTCCCGCGCCGCTTTATCAACCGTcgccgcccgccgcggggccggaccgc--gccgacggctcccgcgcctccgccgcgccc-----TCATGAGCCGCGGCCG-CCGCTCCCGCGGAGCACGGCGACAGCGGGGCC--GCCCTGCATGGCCCCGGCTGCGGACATGACCACCGCGCCCACCGGCGTCCGCAGCGACGAGCCGCCCGCCTCCGCCTTCAGCAAGCCCGGCGG---------------CGGCCTCC----CCGTCGCGGCGGCG---------ATGGGCGGCGAGGAGGAGAGCGACAAACCCAAGGTGTCCCCTTCCCCGCTGCCCTTCAGCGTGGAAGCGCTCATGGCCGACCGCAGGAAGCCGCCGGGCGGCAGAGACGGTCC----------CGAGGGT------------------TCCGGGCCCCCTCTGGGC--TCCGCCCGAGCCAACCTCGGCGCTCTGACGACGGAGGCACCGACGTCGCCGCTGCCTCTCGGCGGCCACTTCCCGTCCGTCGGGGCGCTGGGCAAGCTGCCCGAGGACGCGCTGCTCAAAGCAGAGAGCCCCGAGAAGCCGGAGCGGAGCCCCTGGATGCAGAGCCCCCGCTTCTCGCCGCCCCCGCCCAGTAAGTAG---------AGGT-----GGGAGGGGGAGAAGCGGAGCCCGGG .::...x..:...:....::...x.---....:......x..------.:.:..:.x.x-........xxxxx.x....::xxxx..x.....:..x.:x.x.x:.x.x....xx:::--.:........x:....x....x::::.xxxx.:..:.:xx---------..:.....x..x.....----....x..----....-------..x...x::.x..----....x...---------...x..x.x..x.x..--..:x::....x:.x:x..xxxxx.....-------x.::xx.xxx.......x.xx...x..x.:x...--..x..x.x.xx......::..:x.x.....-----:....xx.x.....:.-..:x.x.:....x:------..x:.x......--..:..................x........:x.:x:...xx:...:...x:x:xx..x..---------..........:.......-.....---------------x....:..----...:......x:..---------.......xx..x......:.x.x...:.....:...........x.:x.................:................:..........x-....x:x:....xx.:..----------......:------------------..x.x..xx..x......--:.....x.:.:.:--..x..x..:.------....x..:..xx.x.......x...x......---..:...:..---..x....x:..xxx.........x..:..:.....xx.......x.................x...x...x...x.......................x.....x...x.....:.....---------...:-----.........xx::.:..:.x..... 25M3I14M6D11M1D58M2D40M9I17M4D7M4D4M7D13M4D8M9D16M2D28M7I34M2D30M5D16M1D14M6I12M2D60M9I18M1I5M15D8M4D14M9D94M1I18M10D7M18D18M2D13M2I10M6I32M3I9M3I120M9D4M5D25M 578/802 72.1% 852/94230402 0.0% 171/802 21.3% -76915014 -17315388 +31349 chr4 + 190214555 4862632 4862631 4863160 529 CTTCTTGGGCTGATCATGCTCCAATGCTTCTCTCTTAACCCCTTGCTTTTTTTTTCTTT-------CGGCCCTCAGGGCGGCTGAGCCCCCCAGCCTGCACCCTCCGCAAACACAAGACGAACCGTAAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCGGAGTTCTCCAGCTCGCTCAGCCTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAGCCCATGCTGCCACCGGCTGCCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCGGCGGGTGCCTCGCTCTACGGTGCCTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTGGCGCCCGTGGGACTCTACACGGCCCATGTGGGCTACAGCATGTACCACCTGACATAGAGGGTCCCAGGTCGCCC chr4 + 94230402 81776440 81776439 81776947 81776440 81776439 81776947 508 CTCCTAGGGCGTACCAGGCT----------GCTGCTAACCCGTGTCTCTTCCTCTCCTCACTGCTGCGGT--TCAGGGCGGCTGAGCCCCCCCGCCTGCACCCTGCGCAAGCACAAGACCAACAGGAAGCCCCGGACGCCCTTCACCACGGCCCAGCTGCTGGCCCTGGAGAGGAAATTCCGCCAGAAGCAGTACCTGTCCATCGCTGAGCGTGCCGAGTTCTCCAGCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCGCCAAGGCCAAGCGGCTGCAGGAGGCCGAGCTGGAGAAGCTGAAGATGGCAGCCAAGCCCATGCTCCCGCCTGCTGCATTCGGCATCTCCTTCCCGTTGGGCGGCCCAGCA------------GTGGCCGGCGCATCCCTGTACGGAGCCTCCAGCCCCTTCCAGCGAGCGGGGCTGCCCGTGGCCCCTGTGGGACTGTACACGGCGCACGTGGGATATAGTATGTACCACCTTACATAGGG----CCGAGCCGCCC ..:..x....xx.:..x...----------x..x:......x.xx..:..::.:..:.:-------...:--....................x...........x.....:........x...x.x.....x.................x..x...........x......x.x..:.............................:.....:..x..........................:.................x..........................x...x.:..:..:.....x.......................x..............x..:..x.....x......x..........x:.x........x...------------.:...x..:..x..x..x.....x.....::.............x..x.x......:.....x..:........x........x..:.....x..:..:...........x......:.----..::.:..... 20M10D29M7I4M2D318M12D119M4D11M 422/501 84.2% 508/94230402 0.0% 35/501 7.0% -76913808 -17316594 +8708 chr4 + 190214555 4862747 4862746 4863259 513 CCGTAAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCGGAGTTCTCCAGCTCGCTCAGCCTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAGCCCA-TGCTGCCACCGGCTGCCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCGGCGGGTGCCTCGCTCTACGGTGCCTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTGGCGCCCGTGGGACTCTACACGGCCCATGTG-------GGCTACAGCATGTACCACCTGACATAGAGGGT-----------CCCAGGTCGCCCACCTG--TGGGCCAGCCGATTCCTCCAGCCCTG-GTGCTGTACCC-CCGAC-----GTGCTCCCCTGCTCGGCACCGCCAGC-----------CGCCTTCCCTTTAACCCTCACACTGC chr4 + 94230402 87441658 87441657 87442152 87441658 87441657 87442152 495 CCGGCGGGCGCGGACAGCTTTCACCTACGAGCAGCTGGTGGCGCTGGAGAACAAGTTCAAGTCCACGCGGTACCTGTCGGTGTGCGAGCGCCTCAACCTGGCGCTCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCACCA------------------------AGTGGAAGAAGCAGAACCCGGGCGCCGACACCAGCGCGCCCACCggcgg----------------------cggcggggcgggcggcggggcgggcg----gggcgctgggcggaggggcgctgccgggcggCCTCAGCCCGCTCAGCCACTCGC--CGCCCATGGG-CAACCCGCTGTCCATGCACGGGCCCGGCAGCTACGCGGGTCACCCGGCCGGGGGGTTGGTGTGCGCCGCCCAGCTGCCCTTCCTGCCCAGCCCAGCCG--TCCTCTCGCCCTTCGTGCTGGGCTCGCAGACTTACGGCGCTCCGGCTTTCTACACCCCTCACCTATAAGCGCGCGCCTCCTCTTT--CCCTCAGCCCGC ...xx:.x.......:x.:......xx..x.......x...........x:.......x:x:xx.x..:.........x:.xxx.......x:x:.x:.xx.xxx...............:.................x..................:...------------------------..:x.:......x...xx:..x....:.xx...-:..xx........x.----------------------......xx.x.xx.x:.x:....x..----...:..:xx..xxx:x..:..:x.:..x.xx:::....x...:xx..::.::.:--.....:....-.xx:x.:.x.:.....::-------...x:.x:.::.x::....:.:.xx:.:..x.-----------.....x.xx..:x....--::.x.......--.....:x.....x-......x:.:.-.x...-----.:.....xx:x:..x:....x.:x:.-----------.....:.:....--......xx.:.. 161M24D33M1I15M22D26M4D54M2D10M1D18M7I32M11I17M2I11M2D13M1I11M1I5M5I26M11I12M2D12M 305/456 66.9% 495/94230402 0.0% 96/456 21.1% -82578911 -11651491 +5384 chr4 + 190214555 4865835 4865834 4865953 119 AGTTTGGCAATTTAGGGTAGAGGCAAATTTAGA-GCAACATAATTGCGGTAATGAGCAACGGCTCACCCTCTGCAGACGCGTCGCGGCTCCAGCGAGGCGGTAGCTGCAGGCGAGGCGGG chr4 + 94230402 81778403 81778402 81778519 81778403 81778402 81778519 117 AATTTAAAACGTTAAGGTTGAGGCAAAGTTAGAAGGAAAATAATTGCTGTAATGAG-GCTGGGCAATCTTCTGCAGGCAC--CGCGGCTCCAGCGAGACTGTAGCTGGGGGCGAGGCGGG .:...::x.xx...:...x........x.....-.x..x........x........-:x:..x:x.:.:.......:.:.--...............:.x.......x:........... 33M1I22M1D23M2D38M 90/116 77.6% 117/94230402 0.0% 4/116 3.4% -76912568 -17317834 +3422 chr4 + 190214555 4876850 4876849 4876925 76 TCATTTTGTAGATGGGGAAACAGAGGCTCAGAAAGCTTAGAGAACTTTTCTGAGGTCACACAGCTATTGAATATAA chr4 + 94230402 82283126 82283125 82283201 82283126 82283125 82283201 76 TCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAGGACAA ......::..x..........x.:.:.x...:x..x...::x:...xx:..:...........:..x...:x.:.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -77406276 -16824126 +3399 chr4 + 190214555 4883603 4883602 4883718 116 GAAAAAAACAAAAACAAACAAACAAACAAAAAAAAAAAGGAAAGAAAATAAAAGAAAATTAAAGACAGCATTAAATTCTTAAAGATTTGTGGTGATAAAACATTTGC-----TGATCAAGA chr4 + 94230402 25733602 25733601 25733709 25733602 25733601 25733709 108 GAGGGGAACAAAAACAAACAAACAAACAAAACAAAAAAAGGAAAAAGATCTCTGGATAAGGAAG-------------CCGAGACACTTGTACTGATATCAGATTTGCCCTTTTAATCAAGA ..::::.........................x......:.:..:..:..xxxx.:.x.xx:...-------------.:x.:.x.:....:x.....xx.x......-----.:....... 64M13D30M5I9M 74/103 71.8% 108/94230402 0.0% 18/103 17.5% -20849999 -73380403 +15249 chr4 + 190214555 4920843 4920842 4921064 222 GAGCTTGTTTGGAGGCCCTAGCAGGGGTGCAAAGCTACTCATATACCCTTGGCTGAAGACCAGT-CCTCCTCTATCGGGGATTGTCGT-------------GAGTGCAGCTTTGGGAAGGACGCATATGGAGTGGTGAGGGAGGAAGGGGACACCTGCCTAGCCAGCCAGATCAGCCGAATCAACTTTGGCGATCAATGGGGTGACAGATGTCACAGCCAGATCACCCTCACATCC chr4 + 94230402 24950307 24950306 24950541 24950307 24950306 24950541 235 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCC ...............::..........x..:x......-.:..........:....x..x.:..-..x:............xx.....-------------.x.........:....:.......:......:......:........:......::....................:.......::...:......................:..........:........... 38M1D25M1I23M13I135M 192/221 86.9% 235/94230402 0.0% 15/221 6.8% -20029464 -74200938 +3119 chr4 + 190214555 4934996 4934995 4935044 49 TTTTTATCCCAACCCTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 5672112 5672111 5672160 5672112 5672111 5672160 49 TTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAG ..:...:...xx...:.x:...................x.:........ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -737116 -93493286 +3193 chr4 + 190214555 4942061 4942060 4942112 52 TTTTTTTTGTTTTTTTTTTGTTTTGTTTTTGTTTTTTTTAAGAGATAAAACT chr4 + 94230402 26123066 26123065 26123117 26123066 26123065 26123117 52 TTTTTTTTGTTTTTTTTTTGAGAGGATTTTTTTTTTTTTAAGAGAGAAAATT ....................xxxx.x....x..............x....:. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% -21181005 -73049397 +3350 chr4 + 190214555 4943728 4943727 4943772 45 AAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248044 75248043 75248088 75248044 75248043 75248088 45 AAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:.:..::...................x.x.............. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -70304316 -23926086 +3353 chr4 + 190214555 4943735 4943734 4943774 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -70304314 -23926088 +3567 chr4 + 190214555 4943737 4943736 4943776 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -70304312 -23926090 +3102 chr4 + 190214555 4943739 4943738 4943774 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -7657565 -86572837 +3353 chr4 + 190214555 4943739 4943738 4943778 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -70304310 -23926092 +3139 chr4 + 190214555 4943741 4943740 4943780 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -70304308 -23926094 +3316 chr4 + 190214555 4943741 4943740 4943776 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -7657563 -86572839 +3102 chr4 + 190214555 4943743 4943742 4943778 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -7657561 -86572841 +3274 chr4 + 190214555 4978792 4978791 4978877 86 CACTTGGAATTCCAGCTACCTGGGAGGCTGAGGCAGGAGAATTGCTTAAACTCAGGAGGTGGAGGTTGCAGTGACCAAGATCCCAA chr4 + 94230402 76033207 76033206 76033290 76033207 76033206 76033290 84 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA--GAACATGATGCCAA ...x..x.:..........:..::........x.xx.x...x::...:...:...:..x.xx:..:..:.--..x..x...x.... 70M2D14M 59/84 70.2% 84/94230402 0.0% 2/84 2.4% -71054415 -23175987 +13575 chr4 + 190214555 4990096 4990095 4990506 411 TTTGCTCTTGATGAACCAATAACCTTGAACATCTGAAAATAAAACGTCTATGGCCCCCACAGCCTACTGAGGTTGT-GTGGCTCTGCAGACATTATAAAACATCAAATTAGATGGAAAATTGCCCGGGGTCCCTGTAAATGAAAATTACTCTTTTTTATAGGGGGAAAAAATGACCCTTATAATCGCAACAAACAATTCTGGGCTCTTCCTTTTATTAGCCGG-CTCACATGGCAAGCAGTATTTTCTCATTCCACCGCTTTGGCCCCAACCCATGTTTTTACCACATTTTACTTTGCACATTTTCACAGCATTGTAACATGAAAATGAGGTTCTGCCCTTGTCTTGAGTTCCTGTTGGAAGGGGATGTTTTGCCTCCGCAAAGTTTTAGCCTCCTGGTGAGTGCTGGCTGGA chr4 + 94230402 81821757 81821756 81822143 81821757 81821756 81822143 387 TTTGGTCAAGATAAACCAATGGCCTTGAA-ATTTGGAAACAATATATAT-TCGACCACACAAACTAATAAGGCACCAGTGTTTTAGTAGACATTATAAAACATAAAATTAGATGGAAAATTGCCTTAAGCCCCTGTAAATTAAAATTGCTC-TTTTTATA----GCAAAAATGAGCCTTAT-ATAGCAACAAACAATTTTGTGATCTTCATTTAACTAGCCAATTTCATATGGCAAACAGTATTTATTCATCCTGCTCTAGTGACCT--AACCAGCAATTTACAATGTGATGCCTTGCATATTTTCACAGTGTTGTAA---AAAAGTGAGGTTCTGTAGATTTATTTGATCCCTGTTGAAAAATTATTTTTTTACCT-------------CCTCCTAACCAGTGTAAACTGGA ....x..xx...:.......::.......-..:..:...:..x.::.x.-.x.x..x....:x...x.:...:xx:-...x:.:x.:................x....................:x::.:..........x......:...-........----.x........x......-..x.............:..x.x.....x...x.:.....::-:...:.......:........x:....:.::.:x:xx..:..:--.x...xxxx.....x.::.xx.:.:.....:..........::......---:...:..........:xxx.x.x..x::.:.......:..::xx..x....xx.::-------------......:::x....:x::..... 29M1D19M1D26M1I74M1D8M4D17M1D41M1I43M2D49M3D56M13D23M 277/385 71.9% 387/94230402 0.0% 28/385 7.3% -76831661 -17398741 +6747 chr4 + 190214555 5016824 5016823 5016967 144 GCATCC--ACTTACTCTCCTGCAGAACGAGTTCATGATGGTGTACAGCTTCCGTGCTTTGTCCTTCAAGGAATCTACCTGGGCCACTTTCCAACACGGGGGCGAGGCCACAAAGTCCCGCAGCTTGTCCAGCACACAGTAATTCTG chr4 + 94230402 81849001 81849000 81849146 81849001 81849000 81849146 146 GCATCCTGACTCACCCTTCTGCAGTAGGAGATCATAATGGTGTACAGGCTCCGGGCTTTTTCCTTCAGCTCACTCACTTCCAGCACTCTCTCACATCTGGGGTAGGCCACAAAGTCACGGAGTTTTGTCAGCACACAGTAATTCTG ......--...:..:..:......x.x...x....:...........x:....x.....x.......:xxx.:::..:.xx:x....:..:x...:xx...xx.............x..x..:..xx:.................. 6M2I138M 107/144 74.3% 146/94230402 0.0% 2/144 1.4% -76832177 -17398225 +3916 chr4 + 190214555 5017130 5017129 5017192 63 CTTACGTGTATGTCCAGGTACAGCCTGGGCAGGTATCTCACACATGGCTCCTGTGGAAAGGGA chr4 + 94230402 81850434 81850433 81850496 81850434 81850433 81850496 63 CTTACATGGATGTCCAAGTACAGCCTGGGCAGGGTCTCCACGCATGGGTCCTGCAGAAAAGAA .....:..x.......:................xx:::...:.....x.....::....:.:. 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% -76833304 -17397098 +3261 chr4 + 190214555 5018930 5018929 5019012 83 TCCTCCGTCCTCCTTAACTCTGATGGGGAGCTGTTTTTCTCCCCATCCTCCCACTCCTTTTTTTTTCTTTTTTCTTTTTTTTT chr4 + 94230402 53757787 53757786 53757857 53757787 53757786 53757857 71 TCTTCCATCTTTTTCACCTCTTAAA------------TCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ..:...:..:.::.:.x....x.x:------------..:....x:..:...x............:.......::........ 25M12D46M 53/71 74.6% 71/94230402 0.0% 12/71 16.9% -48738857 -45491545 +3112 chr4 + 190214555 5018961 5018960 5019070 110 TGTTTTTCTCCCCATCCTCCCACTCCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTT-------TTTTT---------TTACATTTTACAACAGATCCTTTGATATTTGCTAGTAAGTCACAA chr4 + 94230402 5672108 5672107 5672226 5672108 5672107 5672226 119 TGTTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGATTTCCTAGAGGAATTTTTAATAATGGATGCCATTTTCCACAAGA-------GTTTTTGTCAATAAGTCACGA ......::.x...x:..:.....:.:.........:......x.:.....xxxx...::.-------.....---------.xx......x..xx...-------:.x....::.:........:. 60M7I5M9I17M7D21M 75/103 72.8% 119/94230402 0.0% 23/103 22.3% -653147 -93577255 +4716 chr4 + 190214555 5051817 5051816 5051991 175 CGGCATCCCAGCGGCCGGGCATGTAGCAGCGGCAGCAACGGCGGAATATGGGCGGGAACCACTCCCACAAGCCCCCCGTGTTTGACGAGAATGAGGAAGGTAAGAGAGCGAGAGGTGCGAATT-CCCGCTTCG-CGGGGCATCCCCTTCCTCCACCACCCTCGGCCGAGCCCTGCGG chr4 + 94230402 81876899 81876898 81877069 81876899 81876898 81877069 171 CGGAATGCTGGCGGCGGGGGATGCGGAGCCGGCTGT---GGACTAACATGGGGGGCAGCCACTCCCACAGGGCGCCCGTGTTCGACGAGAACGAGGACGGTGAGTGTG-GAGCTGTCCAAGGTAcccgccgcgcccgcgcgccccgTAGTTC--CCATCGCTGGCTCAGCCCCGGGG ...x..x.::.....x...x...::.x:x....x.:---..xxx..:.....x..x.:...........:.x.x........:........:.....x...:..x.x.-...xx..x.:.:x.-.....:x..-.x.x..::...x.xx:..--...:.x::...:x.....:.x.. 36M3D69M1D14M1I9M1I18M2D23M 116/169 68.6% 171/94230402 0.0% 8/169 4.7% -76825082 -17405320 +3041 chr4 + 190214555 5092396 5092395 5092461 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCCGGAGAATGGTGTGAACTCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.::........x..x.x...xx::x.....:.:.:.. 6M2D58M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% -70940805 -23289597 +3567 chr4 + 190214555 5095475 5095474 5095557 83 CGTGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGAAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--......:...........::........x.xx.x...x::........::....x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -70937722 -23292680 +3485 chr4 + 190214555 5100348 5100347 5100454 107 CCTTCCTCCCCCCAGCTGCCTTTCTTGCCTTCTTCTTCCTTCCTTCCTTCTTTCCTTCCTCCCTCCCTCCTTGCCTTCCTTCCCTCCTTCCTCCTTTCTTCCTTCCT chr4 + 94230402 11873147 11873146 11873253 11873147 11873146 11873253 107 CCTCACTGCCACTAGCAGTGGTTTTGGCTTTCCTTTTCTTTCCCTCTTTTTTTCCTTCCTGTTTCCATTGCAGACAATTTTACCTTCATGTTTTTTTTTTTTTTCCT ...:x..x..x.:...x.:xx..:.x..:...:.:...:....:..:..:..........x::...x.:x:x.x.xx::..x...:.x.x:.::...:..::..... 107M 66/107 61.7% 107/94230402 0.0% 0/107 0.0% -6772799 -87457603 +3172 chr4 + 190214555 5100494 5100493 5100575 82 CTCTTTTTCTTTTTCTTCTCTCCTTCTTCTCTCTTTCCTTCCTTCCTTTCCTCCTTTCCTCCTTCCTTCCTTCCTCCTCCCT chr4 + 94230402 57538431 57538430 57538511 57538431 57538430 57538511 81 CTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCC-TCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT .....:.xx...x.:x::.:.:.......x...::.......-....x.:x.::.:..:.....:x....:...::.::... 42M1D39M 54/81 66.7% 81/94230402 0.0% 1/81 1.2% -52437937 -41792465 +3022 chr4 + 190214555 5100739 5100738 5100789 51 CTTCCTCCCTCCTCCCTCCCTCCTCCCTCCCTCCTTCCCTTCTTCCTTCCT chr4 + 94230402 62612356 62612355 62612406 62612356 62612355 62612406 51 CTCCCCTCCTCCTCCCTCCCCCCACCCTCCCCCCTTTTATTTTCCTTACCT ..:..::.............:..x.......:....::x..:.:.:.x... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% -57511617 -36718785 +3369 chr4 + 190214555 5102870 5102869 5102974 105 CCTCCCTCCCTTCTTTCCTTCCTTCCTTCCTTCCTCCCTCCCCTCCCCTCCCTTC------TCCTCCCCTCC--------CCCCTCCCCCTCCTCTCCTTTTTGCCCCTTTCCTTTCCT chr4 + 94230402 92917621 92917620 92917738 92917621 92917620 92917738 118 CCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGT-CCACTTTCCCTCCCT ..x:..:..:....x:.:..:::::..:x.........:...........:::..------..:..:.....--------:.x:.:.:..x:..x.:..:.x.-..x......:.:... 55M6I11M8I23M1D15M 70/104 67.3% 118/94230402 0.0% 15/104 14.4% -87814751 -6415651 +3231 chr4 + 190214555 5135242 5135241 5135332 91 CTATGAGGTAGGTGTTGTATTTTACCCATTATATAGGTGTGGAGGCTGATGCACAGAGAGCCTGAGTGACTTCCCCAACATCACCCAGCCA chr4 + 94230402 82283101 82283100 82283191 82283101 82283100 82283191 91 CTTCAAGGTTAGCATTGTATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTA ..x::....x:.::.......x..x:....x:...x:..x...::...:x:.....:x..x:.:.......xx..:..x:....x...::. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% -77147859 -17082543 +6540 chr4 + 190214555 5139863 5139862 5139968 106 TTAGCAAATCTGACTTGTTTCCTTTTTTGTTTTCTTTTGCAGTCAACTTTGACCATTTTCAGATTCTGCGGGCCATTGGTAAAGGGAGTTTTGGAAAGGTAAGAAT chr4 + 94230402 81902179 81902178 81902284 81902179 81902178 81902284 106 TTTGCAAACTGTATTCTTTTTCTTCTCTCCTTTATTTTCCAGTTAACTTTGACCATTTTCAAATATTGCGGGCTATTGGGAAAGGGAGTTTTGGAAAGGTAAGAAT ..x.....::xx.:.:x...:...:.:.x:...x....x....:.................:..x:.......:.....x.......................... 106M 85/106 80.2% 106/94230402 0.0% 0/106 0.0% -76762316 -17468086 +3141 chr4 + 190214555 5156105 5156104 5156177 73 ACACTCAATGTATATGTATACACATATACATATACACACTCATATGTATATGTGTATACATATACACATATGC chr4 + 94230402 42936197 42936196 42936269 42936197 42936196 42936269 73 ACACTTTATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGC .....:x..x.x.:x:.::.:::.........:x:...:x......:.x:....:.:...x....:....... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -37780092 -56450310 +3251 chr4 + 190214555 5159564 5159563 5159626 63 TGAATATATATGAATATATATATGAATATATATGAATATATATATGAATAT---ATATGAATATAT chr4 + 94230402 55824553 55824552 55824618 55824553 55824552 55824618 66 TGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATATTCAGTGTGAATTCAT ...x..................::x.....::..:x...x...........---:.:.....x:.. 51M3I12M 50/63 79.4% 66/94230402 0.0% 3/63 4.8% -50664989 -43565413 +3067 chr4 + 190214555 5159616 5159615 5159680 65 TATGAATATATATGAATATATATATGAATGTATATGAATATATATATGAATGT---ATATGAATATAT chr4 + 94230402 55824551 55824550 55824618 55824551 55824550 55824618 68 TGTGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATATTCAGTGTGAATTCAT .:...x..................::x..:..::..:x...x.........:.---:.:.....x:.. 53M3I12M 49/65 75.4% 68/94230402 0.0% 3/65 4.6% -50664935 -43565467 +3067 chr4 + 190214555 5159638 5159637 5159702 65 TATGAATGTATATGAATATATATATGAATGTATATGAATATATATATGAATAT---ATATGAATATAT chr4 + 94230402 55824551 55824550 55824618 55824551 55824550 55824618 68 TGTGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATATTCAGTGTGAATTCAT .:...x.:................::x..:..::..:x...x...........---:.:.....x:.. 53M3I12M 49/65 75.4% 68/94230402 0.0% 3/65 4.6% -50664913 -43565489 +3158 chr4 + 190214555 5159692 5159691 5159744 53 TATGAATATATATGAATATATATATGAATGTATATGAATATATATATGAATAT chr4 + 94230402 55824551 55824550 55824603 55824551 55824550 55824603 53 TGTGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATAT .:...x..................::x..:..::..:x...x........... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -50664859 -43565543 +12884 chr4 + 190214555 5168277 5168276 5168455 179 CTCTCCTTTGGCTGTCGCTCAGGTATGCATCGTGCAGAAGCGAGACACTAAGAAAATGTATGCAATGAAGTACATGAACAAGCAGAAGTGCATCGAGAGGGATGAGGTTCGGAATGTTTTCCGGGAGCTGCAGATCATGCAAGGGCTGGAGCACCCCTTCCTGGTCAATCTGTGGTGAG chr4 + 94230402 81909754 81909753 81909932 81909754 81909753 81909932 179 CTTTTACTTTGCTGTCAATTAGGTGTGCATTGTACAGAAGAGAGACACCAAGAAAATGTATGCCATGAAATACATGAATAAACAGAAGTGTATTGAGAGAGATGAAGTTCGGAATGTTTTTCGGGAGCTACAGATAATGCAAGGCCTGGAGCATCCCTTCCTAGTCAATCTGTGGTAAG ..:.:x:..x......:x.:....:.....:..:......x.......:..............x.....:........:..:........:..:.....:.....:..............:........:.....x........x........:........:.............:.. 179M 151/179 84.4% 179/94230402 0.0% 0/179 0.0% -76741477 -17488925 +3576 chr4 + 190214555 5184548 5184547 5184630 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -70848649 -23381753 +3315 chr4 + 190214555 5196290 5196289 5196354 65 TTCTTTCCTTTTCCCTCTCTTTCCTCTCCTCTCTTCTTTCTTCAGTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 69568209 69568208 69568273 69568209 69568208 69568273 65 TTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ..x......::.::x.....:::..x..:::.:.:..:x.....:.:.................. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -64371919 -29858483 +3179 chr4 + 190214555 5196309 5196308 5196358 50 TTTCCTCTCCTCTCTTCTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 86518997 86518996 86519046 86518997 86518996 86519046 50 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTT ....:..:.::.:::....x:...........:...........:..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -81322688 -12907714 +3081 chr4 + 190214555 5204388 5204387 5204463 76 TGTCCTGGGGTTTTTTGTTTGTTTGTTTTTGTTTTTTAGGTTTTTTTTGTTTGTTTTTGTTTTTT-----AGGTTTTTTTG chr4 + 94230402 76149163 76149162 76149243 76149163 76149162 76149243 81 TGTGCTCAGGTTTTTGTTTGATTTTTTTTTTTCTTTAGGGCTTTTTCTGTGTGTTTTTTTTTCTTTTAAGGGGGCTTTTTG ...x..x:.......xx..x:...x.....x.:...x:..:.....:...x.......x...:..-----:..x:...... 65M5I11M 56/76 73.7% 81/94230402 0.0% 5/76 6.6% -70944775 -23285627 +3293 chr4 + 190214555 5204404 5204403 5204482 79 GTTTGTTTGTTTTTGTTTTTTAGGTTTTTTTTGTTTGTTTTTGTTTTTTAGGTTTTTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 34784031 34784030 34784109 34784031 34784030 34784109 79 GTTTGCGTTTCTTTGTTTCCTCTTCTGTTTTTGTTGGTGGTTTTTGGTAGGATCTTTTAGCTTTGTTTTGTTTTGTTTT .....:x.x.:.......::.xxx:.x........x..xx..x..xx.x:.:.:....x.:.................. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% -29579627 -64650775 +3033 chr4 + 190214555 5204412 5204411 5204455 44 GTTTTTGTTTTTTAGGTTTTTTTTGTTTGTTTTTGTTTTTTAGG chr4 + 94230402 33814297 33814296 33814340 33814297 33814296 33814340 44 GTTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGG ......x.........................x.x..x...x.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -28609885 -65620517 +3570 chr4 + 190214555 5302970 5302969 5303048 79 ATGTGTGTGTGTCTGTGTGTGTGTGTGTTTGTGTGTGTATATATATGTATATGTGGGTGTGTGTGTATATATATGTATG chr4 + 94230402 85834538 85834537 85834616 85834538 85834537 85834616 79 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x.....x...x.............:..x:...:x.:...:.......x..:::x..x.:..:::.:...:.:::... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -80531568 -13698834 +3072 chr4 + 190214555 5302984 5302983 5303049 66 GTGTGTGTGTGTGTTTGTGTGTGTATATATATGTATATGTGGGTGTGTGTGTATATATATGTATGT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............:x........xx.:.....::...:::.x...:::::.:.x.:....x.:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -73962535 -20267867 +3606 chr4 + 190214555 5316507 5316506 5316655 149 ATATAATATAT-ATTACATATATAATATATAATATATATTACATATATAATATATAAT--------ATATATTACATATATAATATATAATATATATTACATATATAATATATATTATA--TATTATATATATAATA-TATAAT----ATATTATATATATAATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTA---TATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:..:.:.:.-....xxx.x...x.x.x.x....:....xx.xxxx.:....x....--------..x...:x..:..:..---....x..:......:.....:x.....:.x....--......:...x.....-....x.----:....:.....:..... 11M1I46M8I16M3D34M2I16M1I6M4I17M 107/146 73.3% 162/94230402 0.0% 19/146 13.0% -21003676 -73226726 +3903 chr4 + 190214555 5316532 5316531 5316684 153 ATATAATATAT-ATTACATATATAATATATAATATATATTACATATATAATATATAAT--------ATATATTACATATATAATATATATTATATATTATATATATAATATATAATA----TATTATATAT---ATAATATATAATATATATTATATATATAATATAAT chr4 + 94230402 26320183 26320182 26320348 26320183 26320182 26320348 166 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTA---TATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ..:..:.:.:.-....xxx.x...x.x.x.x....:....xx.xxxx.:....x....--------..x...:x..:..:..---....:..:............:x.....:....----......:...---...:.....xx.xx:....:.....:.....x.:. 11M1I46M8I16M3D32M4I10M3I35M 108/150 72.0% 166/94230402 0.0% 19/150 12.7% -21003651 -73226751 +3633 chr4 + 190214555 5316774 5316773 5316875 102 TTATATATTATACATATATATTATATATTATATATATTATATATTA--TATCATATATATTATATATTATATATAAT-----ATATTATATATATTATATATTATATAT chr4 + 94230402 71903451 71903450 71903558 71903451 71903450 71903558 108 TTTTACATTAT-CGAATGTATTATATATGAAATGTTAGGTATTTTAATCATCATATGTATTATGATTTATATAAGATTAAACATGTTACATATATAATGCATTATATAT ..x..:.....-.:x..:..........x.x..:.xxx:...x...--:.......:......:xx.......x:..-----..:...:......x..::......... 11M1D34M2I29M5I27M 76/101 75.2% 108/94230402 0.0% 8/101 7.9% -66586677 -27643725 +4511 chr4 + 190214555 5316867 5316866 5317038 172 ATTATATATAATATATTATATATATTATATATAATATATAATATATATGATATAATATATATAATATATATAATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAA----TATATAT-GATATAATA chr4 + 94230402 46018777 46018776 46018938 46018777 46018776 46018938 162 ATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCA----ATGATTCATAGATCGTATATGGTATATGCTGTG-----------ATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATA ...x.x..x:.:..x....:.xx..:x.xx...x.::...x:..x:.----..:..x:...x.x::.....::.....:x.:..-----------......:...x....:::............x:.x........:.:..:...x.......x.----...:...-.....:... 47M4D33M11D61M4I7M1I9M 110/157 70.1% 162/94230402 0.0% 20/157 12.7% -40701910 -53528492 +4310 chr4 + 190214555 5316899 5316898 5317057 159 AATATATAATATATATGATAT---AATATATATAATATATATAATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAATATATATGATATAATATATTATATATATAATATAT chr4 + 94230402 46018760 46018759 46018915 46018760 46018759 46018915 156 AATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCAATG------ATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATAT ......x..x..xx:....x.---..x.:..x.x..:.xx..xx.xx...x.:::...x..x:...:------..x:...x.x::....xx:......x.:.:......:...x....:::............x:.x........:x:..:...x....... 21M3I43M6D89M 103/153 67.3% 156/94230402 0.0% 9/153 5.9% -40701861 -53528541 +4141 chr4 + 190214555 5316960 5316959 5317160 201 ATATATATAATATATATAATATATAATATATATGATAT-----AATATATAATATATATAATATATAATATATATGATATAATATATTATATAT---ATAATATATATGATATAATATATTATATATTATATATATAATATATATGATATAATATATAATATATATAATACATTATAATATATAATATATATGTATAATATACATATTA chr4 + 94230402 46018746 46018745 46018945 46018746 46018745 46018945 200 ATCTATGTAGTAGG---AATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA------GTCGTATGTATAGATATGATAAAGGTTA ..x...:..:..x:---......x..x..xx:....x.-----:.:..x.x..:.xx..xx.xx...x.::....x..x:...:xx.:...x..---...xx:......x.:.:......x...x..xxx::............x:.x........:.:..:...x....:....------:.x:...:...:x...xx...x.x:... 14M3D21M5I51M3I78M6D28M 127/192 66.1% 200/94230402 0.0% 17/192 8.9% -40701786 -53528616 +3603 chr4 + 190214555 5316972 5316971 5317077 106 TATATAATATATAATATATATGATA---TAATATATAATATATATAATATATAATATATATGATATAATATATTATATATATAATATATATGATATAATATATTATATA chr4 + 94230402 74777128 74777127 74777234 74777128 74777127 74777234 107 TATAAAATAAA-AATGTATACAGTAAATTAATAAATG-TATATATTTTGTACAATATGTAAAGTACAATGTTATTTATACATTATATATATGATATGAAGTATTACTTA ....x....x.-...:....:::..---.....x..:-.......xx.:..:.....:..x::..:...:.xx.x....:..x.............:.x:.....:x.. 11M1D13M3I9M1D71M 76/104 73.1% 107/94230402 0.0% 5/104 4.8% -69460156 -24770246 +3243 chr4 + 190214555 5321120 5321119 5321221 102 GACTCTAGGCAAGTTACTCAGCTTCTCTGAACATCAGTTCTGTCACCTCTAAAATAGCCATAATAATGCCTA-------CACCAAAGTGTTGGAAGATTAAGTGAGATC chr4 + 94230402 83501141 83501140 83501249 83501141 83501140 83501249 109 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTC ......:.....:.....:.:.:.x.x..x:.x......:.x:.....x......:.xxx.:...:.:x:..-------...x:::..:...x:..::...:.x.:x.. 72M7I30M 66/102 64.7% 109/94230402 0.0% 7/102 6.9% -78180021 -16050381 +11860 chr4 + 190214555 5331161 5331160 5331397 237 TCTTGAGG-GTGCTGAAGGTGCCTCC---ACCCCTAATCTTCTCTGTCCTTCTGTGCTCCTAGGTACTCCTTCCAGGATGAGGAGGACATGTTCATGGTGGTGGACCTGCTCCTGGGAGGCGACCTGCGCTACCATCTGCAGCAGAATGTGCATTTCACAGAGGGGACTGTGAAACTCTACATCTGTGAGCTGGCACTGGCCCTGGAGTATCTTCAGAGGTACCACATCATCCACAGGTAA chr4 + 94230402 81958244 81958243 81958483 81958244 81958243 81958483 240 TCTTAGGGCATGCTGCAACTGATTCTCTGACCTGAAATCTCAGCTATATTTCCTT-CTTCCAGGTATTCCTTTCAAGATGAAGAAGACATGTTCATGGTGGTTGATCTCTTGCTTGGAGGAGACCTGAGGTACCATTTGCAGCAGAACGTCCACTTTAATGAAGGAACTGTCAAATTGTACATCTGTGAGCTGGCACTTTCCCTGGATTATTTGCAGAGATACCACATCATTCACAGGTGA ....::..-:.....x.:x..x:..:---...:xx.....:xx..:.x:...:x.-..:.:.....:.....:..:.....:..:.................x..:..x:.x..x.....x......x.x......:..........:..x..:..:.xx..:..:.....x...:.x....................xx.......x...:.x.....:...........:.......:. 8M1I17M3I26M1D185M 180/236 76.3% 240/94230402 0.0% 5/236 2.1% -76627083 -17603319 +3929 chr4 + 190214555 5356857 5356856 5356940 84 ACGTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCACTTGAACCCAGGAGGTAGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....::...:--......:.........::::........x.xx.x...x.............:..x.xx:.....:.. 15M2D67M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% -70676339 -23554063 +3005 chr4 + 190214555 5357004 5357003 5357044 41 TGTGTATATATATATATATACACACACACACACACACATAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ...::.......................x.x.......:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 947922 NA +3056 chr4 + 190214555 5357006 5357005 5357047 42 TGTATATATATATATATACACACACACACACACACATATATA chr4 + 94230402 74671076 74671075 74671117 74671076 74671075 74671117 42 TGTATATATATATATATACACACACACACACAAAAAAAAATA ................................x.x.x.x... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -69314070 -24916332 +3218 chr4 + 190214555 5357016 5357015 5357085 70 TATATATACACACACACACACACACATATATACACACACACATATATACACACATATACACACACACACG chr4 + 94230402 54963193 54963192 54963262 54963193 54963192 54963262 70 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACG .:.....x..:...x.::.....x:.....:.........xx:.::.:.:.x....:.....:x:.:... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -49606177 -44624225 +3063 chr4 + 190214555 5357018 5357017 5357079 62 TATATACACACACACACACACACATATATACACACACACATATATACACACATATACACACA chr4 + 94230402 54963193 54963192 54963254 54963193 54963192 54963254 62 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACA .:....:x..:...x.::.....x................xx:.::::.:.x:......... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -49606175 -44624227 +3689 chr4 + 190214555 5370927 5370926 5371077 151 CATGCCACTGCACTCCAGCCTAGGTGACGAAGCAAGACACTATCTAAATATATATATATGTGTGTGTGTGTATATATATATATATGTATATAT---------ATGTGTATATATATGTATATATATGTGTGTGTGTGTGTATATATTCTAACACTTGTTA chr4 + 94230402 90325470 90325469 90325619 90325470 90325469 90325619 150 CATGCCATTATACTAAAGT---AGTTATAAAACAAAAC-TTATCTATGTTGTTACttattttt---tatgtaaataaatat---tttatacattataaGGTAATTTTTGAATATATGTATATATCTTTACATGTGTATGCATATATTTTAACACTAGGTA .......:.::...xx..:---:..x.::..:...:..-:......x:.xxx..:x...x.x.---.:....x...x....---.x....:..---------..x.x.:x..............x.x.:::.....:..:.......:.......x.x.. 19M3D16M1D24M3D15M3D9M9I58M 100/141 70.9% 150/94230402 0.0% 19/141 13.5% -84954543 -9275859 +3181 chr4 + 190214555 5370931 5370930 5371031 101 CCACTGCACTCCAGCCTAGGTGACGAA-GCAAGACACTATCTAAATATATATATATGTGTGTGTGTGTATATATATATATATGTATATATATGTGTATATAT chr4 + 94230402 37579472 37579471 37579573 37579472 37579471 37579573 102 CCTCCGTGCTTCCTCCTAAGCAGCTAGTATATGGCTTTACCTTGGGCCATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ..x.:.::..:.xx....:.:::.x.:-::.x.:.x:..:..x::xx:................:........x..::.:.:.:.....xx....:.x..:. 27M1I74M 63/101 62.4% 102/94230402 0.0% 1/101 1.0% -32208541 -62021861 +3258 chr4 + 190214555 5370970 5370969 5371068 99 CTAAATATATATATATGTGTGTGTGTGTATATATATATATATGTATATAT----ATGTGTATATATATGT----------ATATATATGT----GTGTGTGTGTGTATATAT-TCTAA chr4 + 94230402 89812942 89812941 89813058 89812942 89812941 89813058 117 CTCAGTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAA ..x.:.x.....:.xx....x....-.:.....x...x......:.....----...:x.xx...:....----------..:::.....----..................-..... 25M1D24M4I16M10I10M4I18M1I5M 79/98 80.6% 117/94230402 0.0% 20/98 20.4% -84441972 -9788430 +3789 chr4 + 190214555 5392290 5392289 5392386 97 GTGGTGCACGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCATGAGAATCACTGGAATTCAGGAGGCGGAGGTTGTAATGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..........--....:.:...........::.:......x.x..x...x....x...::...:..x:xx:..:....:------..x..x...... 10M2D67M6D12M 67/89 75.3% 89/94230402 0.0% 8/89 9.0% -70640911 -23589491 +7935 chr4 + 190214555 5416830 5416829 5416955 126 TTTCTGTATTTGCAGGACATGTTCACATTACAGACTTCAACATAGCGACGGTAGTGAAAGGAGCAGAAAGGGCTTCCTCCATGGCTGGCACCAAGCCCTACATGGGTGAGTGTTCCAGGCCCCTTC chr4 + 94230402 81989084 81989083 81989209 81989084 81989083 81989209 126 TTTGTGTAATTGCAGGACATGTTCATATCACTGACTTTAACATTGCAACCATAGTGAAAGGCTCAGAAAAGGCTTCATCTATGGCTGGCACAAAGCCCTACATGGGTAAGTTTTCAAGACAGTTTC ...x....x................:..:..x.....:.....x..:..x:..........xx......:......x..:...........x...............:...x...x..:.xx:... 126M 103/126 81.7% 126/94230402 0.0% 0/126 0.0% -76572254 -17658148 +3077 chr4 + 190214555 5428400 5428399 5428435 36 TCTGTCTAAAAAAAACAAAACAAACAAACAAAAAAA chr4 + 94230402 22392447 22392446 22392482 22392447 22392446 22392482 36 TCTATTTAAAAAAAACAAAACAAACAAACAAAAAAA ...:.:.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -16964047 -77266355 +7924 chr4 + 190214555 5446671 5446670 5446783 113 AGCTCCAGAAGTATTCCAGGTGTACATGGACAGAGGCCCCGGATACTCGTACCCTGTCGACTGGTGGTCCCTGGGCATCACAGCCTATGAGCTGCTGCGGGGCTGGGTAAGAC chr4 + 94230402 82002459 82002458 82002571 82002459 82002458 82002571 113 AGCTCCAGAAGTGTTCCAGGCCTTTATGGACGGAGGCCCAGGGTACTCATACCCTGTTGACTGGTGGTCTCTAGGAATTACAGCATATGAATTGCTGAGGGGTTGGGTAAGAC ............:.......:x.x:......:.......x..:.....:........:...........:..:..x..:.....x.....::.....x....:.......... 113M 94/113 83.2% 113/94230402 0.0% 0/113 0.0% -76555788 -17674614 +3705 chr4 + 190214555 5447497 5447496 5447593 97 GTGGTGGCACTCGCTTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATGGCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA ......-----.:.x......::..........::........x.xx.x...x.......:..::.:..x.:x:.....:..---:x.......x.. 6M5D71M3D12M 66/89 74.2% 89/94230402 0.0% 8/89 9.0% -70585704 -23644698 +3290 chr4 + 190214555 5448597 5448596 5448664 68 TCCTTGCTGATTCACAAATAAACTATTTTATTTTATTTTTTAATTCTTCTGAGTTTTCTGCTGAAAGA chr4 + 94230402 81640183 81640182 81640250 81640183 81640182 81640250 68 TCCTTGTTGACTCATAACTAATTTATTTACTTTTACTTTTTAACTTTAATGATATTTTTGCTTGAAGA ......:...:...:..x...x:.....xx.....:.......:.:.xx...xx...:....x:.... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -76191586 -18038816 +8382 chr4 + 190214555 5456796 5456795 5456945 150 TTTGATTGCAGAGGCCGTACGAAATCCACTCGGTCACGCCCATCGATGAAATCCTCAACATGTTCAAGGTGGAGCGTGTCCACTACTCCTCCACGTGGTGCAAGGGGATGGTGGCCCTGCTGAGGAAGGTAAGGGGG---CAGCTTCCAGCCT chr4 + 94230402 82004877 82004876 82005029 82004877 82004876 82005029 153 TTTAATTCCAGAGGCCATATGAAATTCATTCAGCCACCCCCATTGATGAGATACTCAACATGTTCAAGATAGAAAGAGTCCACTACTCATCTACATGGTGCAAGGGCATGATAGCATTACTAAAAAAGGTAAGAAAGTGCCGTCCTCCATCCT ...:...x........:..:.....:..:..:.:...x.....:.....:..x...............:.:..:x.x...........x..:..:...........x...:.:..x:.:..:.::........:::.---.:x.:....x... 137M3I13M 114/150 76.0% 153/94230402 0.0% 3/150 2.0% -76548081 -17682321 +15663 chr4 + 190214555 5458640 5458639 5458881 242 TTCTTGAGAGCTTGTTTGGAGGCTCTAGCAGGGCAGCACAGCTACTCATATACCCTTGACCGAAGACCGAT-CCTCCTCTATTGGGGATGGTCATCCTCTTTGACTGGGTGCACAGCTTTCGGAGGGATGCACATGGAGTCGTGAGAGAGCAAGGGGACACCTGCCTAGCCAGCCAGATTAGCCGAAGCAACCCTGGCAATCAATGGCATGACAGGTGTCGCAGCCAGATCACTCTCGCATCC chr4 + 94230402 24950302 24950301 24950541 24950302 24950301 24950541 240 TTCTTGAG--CTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCC ........--............:..........x...:.......-.:............:..x..x..:.-..x:......:.....x....:.......:...:::.:.::......:x.......:..........:x.........x....:......::...............:....:..x.........::........x:......:...............:.:...:..... 8M2D35M1D25M1I171M 199/239 83.3% 240/94230402 0.0% 4/239 1.7% -19491662 -74738740 +5964 chr4 + 190214555 5460094 5460093 5460244 151 TAACTGCAGCTCCTGACCAAGGATCCTGAGAGCCGCGTGTCCAGCCTTCATGACATACAGAGCGTGCCCTACTTGGCCGACATGAACTGGGACGCGGTGTTCAAGAAGGCACTGATGCCCGGCTTTGTGCCCAATGTGAGTGGAAGTCCCA chr4 + 94230402 82006020 82006019 82006170 82006020 82006019 82006170 151 TGATCACAGCTCCTCACCAAGGACCCAGACTGCCGTCTTTCAAGTCTTGCAGACATCCAAAGCTCTCCATACTTAGTTGATGTCAACTGGGATGCTGTTCTGGAGAAAGCTGTGACCCCAGGCTTTGTTCCGAATGTAAGTCGACATGCCA .:.:::........x........:..x..xx....:x.x..x..:...xxx.....x..:...x:x..x.....:.::..::.x........:..x..x:.x:....:..xx...:x..x........x..x.....:...x..x:.x... 151M 103/151 68.2% 151/94230402 0.0% 0/151 0.0% -76545926 -17684476 +9805 chr4 + 190214555 5466564 5466563 5466840 277 AACAAAGGTAACCCGTGTATCCAACAAGAGTAAGTTCATCATTACTTGTTGAA-TGAATG--------AATGGTTGAATTAATGAAAAGAAAATTCAGTGATGGGTGGAACGCAGACAGACCATGTTTTCTTTTCTACTCCCCTTTAGAAAGGGAGGTTGAACTGCGATCCCACATTTGAGCTTGAAGAGATGATTCTAGAATCCAAGCCACTTCACAAAAAGAAGAAGCGATTGGCAAAGAACAGATCCAGGGATGGCACAAAGGACAGCTGCCCGCTGGTGAGT chr4 + 94230402 82007714 82007713 82007985 82007714 82007713 82007985 272 AACAAAGGAAGCAAGCG-ATC--ATATGAAGTAATTTACTTTCATTTATTAAACTTAATGCTATTACCAGTGAACAGATAAACTTAAAAAAAATGCAATGATACTT----CAAAGAGTAACTTTGAATCCTTTTACACC-------AGAAAGGAAGACTGAACTGCGATCCAACATTTGAACTTGAAGAAATGATCTTGGAGTCCAAGCCCCTCCACAAAAAGAAAAAGCGACTTGCCAAAAACAAATCCAAGGATGGAACTAAAGAAAGCTGCCCCCTGGTAAGT ........x.:.xx.:.-...--.:.x..:xx.:..:.::x.:.:..:..:..-.x....--------.:..:x:::..x..:xx...:.....x..:....:xx.----.:x...xx:..:x..xx.:.....x:..:-------.......:..::.............x........:........:.....::.:..:........x..:...........:......:.x..x..:....:.....:......x..x..:..x........x.....:... 17M1D3M2D30M1I6M8I38M4D29M7D140M 189/263 71.9% 272/94230402 0.0% 23/263 8.7% -76541150 -17689252 +5835 chr4 + 190214555 5467970 5467969 5468094 125 TTTGTCATTT--AGTCACCCC-TCTGTGCT--CTTTGACAGAATGGACACCTGCAGCACTGTTTGGAGACTGTCCGGGAGGAATTCATCATATTCAACAGAGAGAAGTAAGTCC--TTCATACTGTCCCCCT chr4 + 94230402 82008691 82008690 82008822 82008691 82008690 82008822 132 TCTGTCATTTTTAATCAACCTATTCATGCTGTTTTTTAAAGAACGTACACCTGCAGCAGTGCTTGGAAACCGTTAGGAAAGAATTCATCATATTCAACAGAGAGAAGTAAGTGCATTTCTTAATGCCTCTTT .:........--.:...x..:-.:::....--:...x.x....:.x............x..:.....:..:..:x..:.:................................x.--...x..x..:.:.::. 10M2I9M1I8M2I82M2I16M 98/125 78.4% 132/94230402 0.0% 7/125 5.6% -76540721 -17689681 +3110 chr4 + 190214555 5479064 5479063 5479135 72 TTTTTTCTTTTTCTTTGTTCTTGTTTTTTGTTGGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTT chr4 + 94230402 84599379 84599378 84599450 84599379 84599378 84599450 72 TTTTATCTTTTCTTTTATCTGATCTTTTTATTGGTTATCACTACATTGCTTTTGTCTTTGTTTATTTTTTCT ....x......::...:.::xxx:.....:......x.:::.xxx...:......:.......x......:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -79120315 -15110087 +3002 chr4 + 190214555 5479065 5479064 5479145 81 TTTTTCTTTTTCTTTGTTCTTGTTTTTTGTTGGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTTAGATGGA chr4 + 94230402 14574217 14574216 14574290 14574217 14574216 14574290 74 TTTTCCTTTTTGCTTGGCCAGGACTCGGGTTGTTTTTT-------TATTTTTGTTGTTGTTGTTTTTTGTTTTTAGAGGGA ....:......x:...x:.xx.x:.:xx....x.....-------.:........x.....x......x........x... 38M7D36M 56/74 75.7% 74/94230402 0.0% 7/74 9.5% -9095152 -85135250 +3011 chr4 + 190214555 5479085 5479084 5479136 52 TGTTTTTTGTTGGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTTT chr4 + 94230402 21380790 21380789 21380841 21380790 21380789 21380841 52 TGTTTTCTGTTTTTTTTTATTTGTTTGCTTTTGTTTTTTTCCTCTAGTTTTT ......:....xx.....:........:..........x.::.:.xx..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -15901705 -78328697 +5294 chr4 + 190214555 5498938 5498937 5499081 144 TTTGCAGGCTCAGGAGGCAGCAGGGACAGGGCAGCCAGCTCTTGGACACCGACAGCCGAGGGGGAGGCCAGGCCCAAAGCAAGCTCCAGGACGGGTGCAACAACAACCTCCTCACCCACACCTGCACCCGTGGCTGCAGCAGCT chr4 + 94230402 82023877 82023876 82024020 82023877 82023876 82024020 144 TTGGCAGACTAAGAAGGCAGCAGGATCAAAGCGGGCAGACTTCCAGCACGGACAGCAGAGCATCCTTGCAGAGCCATGGGAAGCTTCAAGATGGACGTAACAACAACTTGCTTGGACATGGCTGCACAAGAGGCTGCAGCAGCT ..x....:..x..:..........:x..::..:.x...x::.:x::...x......x...x:xxxxxx...:x...x:.x.....:..:..:..::.:.........:.x..::xx..::x......xx.x............. 144M 94/144 65.3% 144/94230402 0.0% 0/144 0.0% -76524939 -17705463 +4460 chr4 + 190214555 5499195 5499194 5499341 147 GAAAAAGCCCTGGACTTGGAGCTGGGAAGCCTGGGTTCTGGTCCCATCTCCATGACTGATTCACGTGTGACCTCAGACAAGTCACGC--CCTCTCT-GTGCCTCCGTTTTCTGCATCTGCCAAAGGGGTTAAACACTTCTGCCCCACTTC chr4 + 94230402 13242410 13242409 13242556 13242410 13242409 13242556 147 GACAGAGCACAGGAC--AAGACAGCAAGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCC-CATCTGTAAAATAGGGATACTACTACTTACCTACCTC ..x.:...x.x....--::::.x.x:.::.:..:.x....x.....x...:::x.....:....x........::.:.........:--.......-:......x....:.:-......:x...x:..xxx.x:...x..xx..:..:.. 15M2D70M2I7M1I15M1D37M 98/144 68.1% 147/94230402 0.0% 6/144 4.2% -7743215 -86487187 +3126 chr4 + 190214555 5538054 5538053 5538146 93 AAAGAAATAGAAAAAAAAAAAAAGGAAAGAAAAGAAGGAAGGGAAGCAGGGAGGGAGGGAGGAGGACGCAGATTATCAATATCAGGAATGAAA chr4 + 94230402 84536569 84536568 84536661 84536569 84536568 84536661 93 AGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAA .::....x:....:.......x.:x...:.x.:....x:.:.:..:x.....::.:.:.....:..x.:x:xx..x...x..:..x.:.x:.. 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% -78998515 -15231887 +5293 chr4 + 190214555 5562800 5562799 5563140 341 AAATCATCCCTTCTCTCTTCAGATGCTCCCGCA------GGTCTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTT---TTTCCTGGGAGGAACGTGCAGTGAGATCTCTGGCTCCTTTGGATTTCTGAATATAAAGAGCTTCTCTCCTGTGTTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGGCTCCAGTGACAGGTGT---GGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCTTTAATATGCTAAAGAAAT--AGCAAAAGATCAAAT chr4 + 94230402 82054897 82054896 82055243 82054897 82054896 82055243 347 AAATAACTTCCTCT-TCCCCAGTTGATTCTTCAACTGGAGGTCTCCCTCATTAGTTGATATTTGCACGAG-------CAGCCTTTTTGGAATTAAGAAAGTTCTTCTTCTTTTTTCTCGGATAGTTATGAAGAGAAAGTGTTGGATCACTCCGGTCACGAAACAAAAATATCTTTTCCCCTGTGTCTAATACCTCGATGGCTTCAGCTGTCACACTGTTAAAAGAAGCATGTGGACTGGACCGTTCCACAGGAGGACGTGTAGGCAAACTTTCAAGGTGAACGAATGATGGTCTTTCCAGAAGGGCAAGTTGCTTCTTCTTTATCAAGCTACATTAATGAAATAAAGAAATAAAT ....x.:::.:...-..::...x..x.:.:x..------.....::.:.x.x:.:.::.x:x...x.:..-------::..........x...x.:............---...:..x...x::x::..x..x..:.x:x:...x..x:.:x.:.:x.x:..:.x...x.x...:..:.......:.....xx..:....:...x..:x::...x..xxx.x..::..xx..xx:.:::xxx.:....xx.:x:.::..---...x.....:.xxxx:x.:x....:x::x:..:..:xx:..:.x:..x:::x.........x:.x....x.xx...--.::...::.x:.... 14M1D18M6I31M7D31M3I148M3I76M2I15M 194/333 58.3% 347/94230402 0.0% 22/333 6.6% -76492097 -17738305 +3132 chr4 + 190214555 5612793 5612792 5612881 89 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG---------GCAGAGCTTGCAGTGAGCCAGGATTGTGCC chr4 + 94230402 76033206 76033205 76033303 76033206 76033205 76033303 98 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCC ..:.x......:...........::........x.xx.x...xx:.x.......:.:..---------.:...:.x..xx.:x.:x...:xx...... 59M9I30M 62/89 69.7% 98/94230402 0.0% 9/89 10.1% -70420413 -23809989 +7328 chr4 + 190214555 5618502 5618501 5618702 201 CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACCTCCTGCCTCATCCTGAGCAGCTCCTCTTCAGACAGGGAGAAGACTGAGGAGCAGAGCTTCCTG--GGAGGAAGAACAGAGAC chr4 + 94230402 82072824 82072823 82073026 82072824 82072823 82073026 203 CTGACTGACTTTCAGCAGCTGCGCATCCCTCCACTCCAGCTCAAAAGCCTGAAGTAAAGCTCTTGCTCTTATCTTGGGCAGAGCCAAACTGCTGTCCAGCTGTGAAAAGCAGCAGTGGAACTCTTGCCTCATTTTGAGCAATTCCTCTTCAGACAGTGAAAGGGGCAAAGTTAGAAGCTGCCTGTTGGGGTAAAAAAAAAAGC ...:::x.x:....xx.:..x:..x..:.x....x.x:x..x...xxx...x..:.:.:...xx..:.xx........x..:.....:..x.......x...x.x........x:....x...:........::......::..............x..:.:.:x::.:.xxx::....x....--..:.x..:..x.:.::. 184M2I17M 134/201 66.7% 203/94230402 0.0% 2/201 1.0% -76454322 -17776080 +13516 chr4 + 190214555 5631726 5631725 5632046 321 AGAGGAGACATTTACTGAAACAATTCAGAAAAATTACTTT----------TCCATCA-CAGC-----------GAGGCTGATGTATTACCTGTATTTTAGAATAATTTTGCAGCAGCATTTTAGCTGCCTCTGGTTTCAATTCCCCTTTGAAAATAGCACTTTTTATCTGGGTAAAAAAGATACTGTGCAGTTCATTTCTCTGGAAAACAGCCAGCTGTCTGTGAGCTTTGGCAAAGTCTTCTTCTTGTTGCAAAGCGAGAGACTTCCTCAAGTGCTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTTGCTGCACTCTACAGCAGACTGGAGAGAGGAAA chr4 + 94230402 82083884 82083883 82084226 82083884 82083883 82084226 343 AGTGCATATGCTTCCTGAAACGTTTTACAAAAGTTACTATGGGTTTGTACTCTGTCATCAGCTTAAGAAGGGAACAGTTGCCCTATTACCTGTATTTTAGAGTAATCTTCCACTAATGATTTTGCTATTTCCAGTTTCAGTTCTCCCTTGAAAGTAGCATTTGTTATCTGTGTAAAGAAGATGTTATGGAGCTCCTTTCTCCGGGAAACAGCCAGTTGTCTGTAAGCCTTTGCAAAATACTCCTCTTGCTTTACCAGAAGGAACCTCTTCAGATGGTCCTGCTCCAGACTGTGAAGTCTATCCAAAAGACTTTTGTATTCTACAGCAGGCTGCAGAGAAGAGA ..x.x.x.:::..x.......:x..:.x....:.....x.----------..::...-....-----------:x:.:..x:x..................:....:..x..x:.:::x...x...:::..::......:...:..:......:.....:..x.......x.....:.....::.:..x..:..x......:..:..........:.......:...:..x.....:.x:..:.....:.x:.xx:x:..::..:..:...::..x.....:.....:.::..:..xx.x:x..:...::.x:..:.:..........:...x.....:..:. 40M10I7M1I4M11I270M 224/321 69.8% 343/94230402 0.0% 22/321 6.9% -76452158 -17778244 +14091 chr4 + 190214555 5640492 5640491 5640841 350 CTTCCTTTCAGACCTGTCTTACCCTCTCACCAGCACGTTTCAGCAACTCTTCTGCTTCCTCCATTGCCATCATCTCTCTCTGGTACTGGTTTTCCATCTTCTTTCTTGTTTCCAGGTCACATTCAGCTGTCAATGCCACCATCTTCCGATCGTACTCCTCTTGTATTTCATTTTCCAGCAATAGAAACTGCTTTTTGAAAACAGCACTCATTTTTCTCTCTACTTGGGGTGAGAGGTGGCCACTGCTGGTGAGATTTTTCAGCAGAAGGGCAATGATATCCTTGCTGATTTGTGTTCGACAAGCCTCCAGATCTGCATCTGCCCGATTCAGGGTTGCAATCTCCAACCTA chr4 + 94230402 82086695 82086694 82087044 82086695 82086694 82087044 350 CTCCATTCTGTACAAGACTCACCATTTCATTCACTTTCCTTATTAACTCTTCAGCCTCTTCATTTGCAGCTCTCTCTTTCTGGCGTTGAGCCTCCATCTTCTTCCTTGTTTCCAGATTACATTCAGCTGTTAAAGCCACAACCTTCCTTTCGTACTCTTCCTGAAACTCTCTCTCCATTGTAAGAAACTGCTTTTTGAAAATTGAACTCATCCTCTTCTCCACATGCGGAATGAGGCTGTGACTTAAAACCATGTTCTTCATCATTATCGCAATCACTTCTTTACAGATCTGCATTCGATATGCCTCCAAATCAGCATCTGCCCGAGTCAGACTGGCAACCTCCAAGCTA ..:.x..:::x..xx.x..:...x.:...::x:.x:x::.:.x:........x..:..:..xx....x:::x.....:.....:::..:x::...........:...........:.:............:..x.....x.:.....xx........:..:..x.x:..x:.:....x::xx...................:x.x......::.::....:..x..x..x:x....:x.:x...xxx:::x.x:..:....x..xx.xx.....x.:x..:..:.x...:..::.....:.x.......:...x............x....:x.x....:......x... 350M 235/350 67.1% 350/94230402 0.0% 0/350 0.0% -76446203 -17784199 +5744 chr4 + 190214555 5663097 5663096 5663229 133 GAATTCTTACTCTTCTAAGGCTTGAAGCATGCTCCCAGGGTCCTCGGAAGACAGAATGTCTATCATTTGGTCGTTAAGGGAAAGGTCCTCATTCACGCCATCAGCTGAGGTGAACGGCAAGGGTTCCAGCTTG chr4 + 94230402 82095636 82095635 82095768 82095636 82095635 82095768 133 GAATTCTTACTCTTCTAAAGCCTGAAGCATATTCCCCGACTCTTCAAAGGTCAGTATATCAATGATTTGGTCATTCATAATAACATCTTCACTGAAGAGGTCACCTGAACTGAACTGAGAATGCTCCAGTTTG ..................:..:........::....x.:x..:..::.:.x...x..:..x..x........:..x.x::x..x:..:...:.x.x.xx:...x....:x.....x.x:.:x.:.....:... 133M 92/133 69.2% 133/94230402 0.0% 0/133 0.0% -76432539 -17797863 +3091 chr4 + 190214555 5678895 5678894 5678973 79 GTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--....:.:...........::........x.xx.x...x.:......:.::.:..x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -70354306 -23876096 +3838 chr4 + 190214555 5680562 5680561 5680717 156 GAACCCGGGGGTGGGTGTTGGGGACCC--------TGACATTCTAGCCATGGGATACTGGGCAAATCACTTGACTTTAATGTGCCTCGGTTTCCCCATCTG--AAATGGCAGAGATTTTAAAATAGAATCTGTCTCACAAGACTGTGGTAAAGATGACATAATTCC chr4 + 94230402 83501092 83501091 83501250 83501092 83501091 83501250 159 GAAACAGAAGATGGGTGTCACACACCCACATACCTGGATTCTGTACCCA---GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTA----ATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCC ...x.x.::.:.......::x:x....--------x..:x:.x..x...---..:x..........:....:..:.xx.........:....:....:...--......x:xx...xx..----.xx.:..::......:.:x.:.x..:.:.x.:.xx:...... 27M8I14M3D49M2I17M4D42M 100/149 67.1% 159/94230402 0.0% 17/149 11.4% -77820530 -16409872 +3401 chr4 + 190214555 5687117 5687116 5687199 83 CATGGTGGCACACGCCTGTAGACCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTAAATTCGGCAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--.....x:...........::........x.xx.x...x.....:..::.:.x..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -70346080 -23884322 +5994 chr4 + 190214555 5694312 5694311 5694473 162 AAAGCATTGAAC----TTAATACTTACCAGGCGGTGTGTTATAGGAGACTCTCTTTTAAATAAGTTCTTCTTAGGCCAGGAGGGTATAAAAGCAAATAAGGAATGAGCCCATGGCCCACTAGAGGCTGCAGAAGTTGAGAGTGGGATGAAGACTTCCATTTTCTTG chr4 + 94230402 82108295 82108294 82108459 82108295 82108294 82108459 165 AAATCAGTGAACCATCTTTTTACTGACCAGCTGGTGGTTAACAGAAGACTCTCGTTTGAACAAAATCTTCCTTGTCCATGAGGGTATCAGAGCAAATATTGAATGGCTCCACTGATCTTCCGAGGCTGCAGAAGTCAAGA-TCAGATCAGGGACTTCACTTGCTTG ...x..x.....----..xx....x.....x:....xx.x.:..:........x...:..:..:x.....:.x.x...x........x.:........xx.....:x:...:x.x:.x::x..............::...-.x:...x.:.:x:.:..:..x.... 12M4I124M1D25M 113/161 70.2% 165/94230402 0.0% 5/161 3.1% -76413983 -17816419 +3193 chr4 + 190214555 5695217 5695216 5695290 74 GTGCGCCTGTAGTCCCAGCTATTCGGGAGGGTGAGGCAGGGGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.......:.:.::...x....x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -70337987 -23892415 +3095 chr4 + 190214555 5721100 5721099 5721175 76 TCTCTGTGTCTCTCTTCCCCTCCTCTCTCTCTACTGCTGTGCCCCCTCCCACCCT--CTCACACTACTAGAATCTGCT chr4 + 94230402 92978645 92978644 92978722 92978645 92978644 92978722 78 TCTTCATGCCACTCTTGTCATCCTCTCCCTCTACTGCTGTCTTCCTTCCCTTCCTTCTTCACCCTGGTAGTGTTTTCT ...:::..:.x.....x:.x.......:............x::..:....x:...--:....x..:x...x:.:.x.. 55M2I21M 53/76 69.7% 78/94230402 0.0% 2/76 2.6% -87257545 -6972857 +6305 chr4 + 190214555 5729287 5729286 5729392 106 TTTGTGTCTTTCCCTCCCAGGAATGTGAGCCGCCTTCCAACAGCAATATCACAGCATTCGCCCTGAAGGCCAAAGTCATCTACCCCATCAATCAGAAGTTCCGGGT chr4 + 94230402 82125130 82125129 82125235 82125130 82125129 82125235 106 TTTTCTTCTTTTCCACACAGGAAAATGAGTCTCCTCTGAACAGTAATGTTACAGCATTTGCACTGAAGGCAAAAGTCATCTATCCCATCAATCAGAAATTTAGGGT ...x:x.....:..x.x......x:....:.x...::x.....:...:.:........:..x........x...........:..............:..:x.... 106M 83/106 78.3% 106/94230402 0.0% 0/106 0.0% -76395843 -17834559 +11638 chr4 + 190214555 5731402 5731401 5731665 264 TGTGACTCCTACTGCCACCCCAGCCTCTGGCCGATGGCTCCTCCAACCCGTCTCTGCATGAAAACTTAAAGCAGGCTGTTTTGCCACACCAGCCGGTAGAGGCCTCTCCTTCCAGCAGTCTGGGGAGCCTGAGCCAGGGTGAGAAGGACGACTGCAGCTCCTCATCCAGCGTCCACTCGGCCACCAGCGATGACAGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCCTGAAGTGCTGGCCTGCGAGAGGTAAGGAG chr4 + 94230402 82125742 82125741 82126005 82125742 82125741 82126005 264 TGTAATTTTTTTTTTTACTGTAGCCTTTGGCAGATGGCTCATCCAATCCATCTTTGCATGAGAATCCAAAGCAGGCAGTTCTGCCTAATCAGGTAACAGAGGCATCTACATCAGGCAGCCTAGAATCCCTTAGCCAGGGAGACAAGGAGGACTGTAGTTCCTCCACAACAATACATTCAACAACGAGTGATGACAGATTTCAGGATCGAGCCTTCTTCAAGGTAACCTGCTTCCCTGAAGTGCTCACATGTGAGAGGTAAGCAG ...:.:.::.x:.x::..:x:.....:....x........x.....:..:...:.......:..:::.........x...:....xx.:...x::::......x...x.x..x:....:..:.::xx...x........x..x.....x.....:..:.....xx.x.xx:.x..:..::.x..x..:........:....xx:::..x:.....:..x:...:.x.xx...............x:.x..:..........x.. 264M 182/264 68.9% 264/94230402 0.0% 0/264 0.0% -76394340 -17836062 +8002 chr4 + 190214555 5748139 5748138 5748347 209 ATTTCACAGATGGAAGCTTTCTGGAAACAGATGGCAAATATCCAGCACTTTCTTGTGGACCAGTTTAAGTGTTCCAGCTCCAAAGCCCGACAGCTGATGATGACTCTGACGGAAAGAATGATTGCAGCCGAAGGGCTATTGTGCGATTCTCAGGAGCTGCAGGCTCTGGTAA--TGCTGGAGGGGGCGGGAGGGAACATAAAGATATTCAG chr4 + 94230402 82132750 82132749 82132956 82132750 82132749 82132956 207 ATTCAACAGATGGAAGCTTTCTGGAAGCAGATTGACAAAGCCCAGCAGGTTTTTTGGGACCAATCAAAATGCTCAAGTGCCGAAGCAGCAAAGATAACGATGGACCTGACTGAGAGGATGATTGCAGTGGAAGGCTTATTAAATGAATCTCAGGATTTGCAGGCAATGGTAAAGTACAAAAAGAAGTAAAAGTCA----AAAGATATTTAG ...:x.....................:.....x.xx..x::......xx..:..xx......:.:x..:..:..x..:x..:....xxx.x..x.:.:....:x:.....x..:..:..........:x.....x:....:x::..x........x:.......xx......--.:.x::.:.::.::::..xx.----.........:.. 172M2I21M4D12M 142/205 69.3% 207/94230402 0.0% 6/205 2.9% -76384611 -17845791 +3010 chr4 + 190214555 5790966 5790965 5791024 59 GTGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x....:.:.........:x.:........x.xx.x...x.:.........:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -70242240 -23988162 +4858 chr4 + 190214555 5793544 5793543 5793724 181 TAGCAAGCAGGATTGTTGAAGTGAGTA-ACCACATGCCTGCTCTGTCCCTCTGTCCCGAGTTCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACACCTGCGGGAGGACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTGAGTA chr4 + 94230402 82156775 82156774 82156951 82156775 82156774 82156951 177 TGGTGATCAAAGTGATGGAAATGAGAGTATCTTAAGTCTGATTTTTTCCCCTGCT-----TTTAGCTATGGATAAATGAATGTGCTCTCTCTTCTGTGATGCAAAAGCACCTGTCTGAGAAACAAGAAAAGATAATGCAAAGCGTAATGAGCAGACTGGGCTGCCTCAGTGATGAGTAAGTA .:.::.x..:::.x:.x...:....x:-.:.x:.x.:...x.:.x.:..:...::-----..:..x.:.....::.x..:.....x..x..:xx:...x....:.x:......:xx...:.x..x..:::x.:x..x.:x:....xx..:..x........x......x...x....:.... 27M1I27M5D122M 110/176 62.5% 177/94230402 0.0% 6/176 3.4% -76363231 -17867171 +6036 chr4 + 190214555 5798582 5798581 5798797 216 CCAGGAGGCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGGCTCCTGGCCGAGGCCCAGGAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGCGCTGCTGGTGCATGC---ACGGAATGCAGCCACCAAGAG-CCGGGCCAAGGACAGGGATGACTTCAAGGTATG chr4 + 94230402 82160930 82160929 82161145 82160930 82160929 82161145 216 CCAGGAGTCTCACATTCTGGAAGAGGAAGAGAAACTTGAGGAAGAAACACAGCAAACTCATTTAGAATTTCACCAGCAGTTAGTAACAGAAATCCAAGAATCTCTTCAGTTTCTTCAGCAACACATGGAGAAAGTGATTGGACGGACGTTGCTGCAGCATGCCAGACAGGAAGCTGCAAAAGAGAATTCAGATGATGAACAG----GAGTTCAAGGTATG .......x.x.:::.x.....:....xx::xx::..x.....:...:.......:..x.:x:.:x.::.:..x....:.:.xx.::.x..:::...:..:x:xxxx...:....x.....:.........x:x.:x.....:.:.:..:.....xx......---..:.:.x..x..x.xx:...:-:.:.::x.x.:....----..x........... 162M3I21M1I15M4D14M 134/212 63.2% 216/94230402 0.0% 8/212 3.8% -76362348 -17868054 +4675 chr4 + 190214555 5808188 5808187 5808330 143 TTCCTCCCCCCAGGATGCTGTCCCAGCAGAAGAGGTTCCTGGCCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGCAGCAG--GCAGGAGTCATGGACCTTCTGGAAGCCCAGCTGGAGACCCAGCTACAGGTA chr4 + 94230402 82167428 82167427 82167570 82167428 82167427 82167570 143 TTCCCTCTACCAGGATGGTGCTGCAGCAAAAGAAGGTTCTGACTCAGTTTGAACTGCACCAACAAATTCGTCTGGAGTTTCTGAAACAGAAGCTGCTGGGAT--TGCATCACCTAGAAAGTGAGATGGAGAATCAGCTGAAGGTA ....::.:x........x..::x.....:....:.x.:...:.:.....:xx.x.......:..:..x......x.xx::.x.x.:...x..--..x..::.--..x.:.x:..:...:x:x..x......x:.....:x..... 92M2I8M2D41M 94/141 66.7% 143/94230402 0.0% 4/141 2.8% -76359240 -17871162 +3066 chr4 + 190214555 5816646 5816645 5816727 82 CCCTTCCCTCCCTCCTTCCCCTCTCTCCCTTCCCTCCCTCCCTTCCCTTCTCCCCTCTCTCCCCTCCCTCT------CTCCCTCCATC chr4 + 94230402 92917626 92917625 92917713 92917626 92917625 92917713 88 CCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATC ...:.::..x...::....:...x..:...:...:.......:..:::...xxx.x:::..:.....:x..------x.::....... 71M6I11M 54/82 65.9% 88/94230402 0.0% 6/82 7.3% -87100980 -7129422 +3269 chr4 + 190214555 5816657 5816656 5816712 56 CTCCTTCCCCTCTCTCCCTTCCCTCCCTCCCTTCCCTTCTCCCCTCTCTCCCCTCC chr4 + 94230402 86523034 86523033 86523089 86523034 86523033 86523089 56 CCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCC .:.:..:.:.:......x.:.............::..:......xx:.:...:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -80706377 -13524025 +26275 chr4 + 190214555 5820791 5820790 5821857 1067 CAGTTCATTTTCTTTATTTTTTCACAAGCTTTGAATTCAGAAATAAGAGCCACAACAAGTTGGTTGT------------TAAGTAAAAATGGGAGTGATTACAAAGGAAAA-CTTTGTACAAAA-CTTTAAAAATCTGACTGCCCCGTCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCCCCATCGTCAGCCCCGAATGGGGATGGGGAGACCTCTTTCTGAGTGTGAA---CCTGGCTCGGCCTGAAGCCTAGAGCTGGCTTGAA-GAACACA-------CACAGACCAGAAG---ACAGCACGGTGAGTTACAAGTGCCACGGAGACCAGGGTTTCTGACACAGGATGTGGAGGATGCTTCTCTGCAACCTAGTGCAAGGCTTCCCCTGCCATTCCGAGAATTCACGGATCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACT-GTAAGGGTTTTGGG-ACTGCCCCTCAGGGCTTGA----GGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTC---AGACGCACTCACAGA------CTTGCATACGTAATTTAGTAACATGCATCAACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGGACAGAACAAGACAATGCTAAAACCTGTGGTTCACTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAA--CACAACTGTGGGGCAAGGAATTTCCAAGCAAACACACCA----CACTAGTACCACTTCTTCCTAAACAGA-------------------AAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCTCCATCAGCACCAACTAAAACTGTGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTAGCTCCTCCGCGCATCCACGTT---CAACCGAGGCTGGTGATGTTGGAGCGGCCACCAGGGGGCGCCACGATGCGGTGGCCGGTGCGCCTGGGATTGTTGTCATCTATCTGGGCACCTGAAA chr4 + 94230402 82175816 82175815 82176856 82175816 82175815 82176856 1041 CAATTAATTTCCTTTATTT---CACAAGCTTTGAATTCAGAAATA-GAACCACAACTAGTAGATCTTGATACGGTAGAGTAAGTAAAAATGCATGTGATTACAAAGGAAAAACTTTGTACAAAAACTTTAAAAATCCGACGGCAACTTGAATTATCT-GTAAGTACCAAAA---AACTCATGCAGAAGGAGAGCACTACTGCCCA------------------GGTGGAGAAATCCCTGCAGGGGTGGCAATGGCATTGGTTTGTATAAAGTATGGCGCTGTCTAAAATGGAAACAATGAAGACACAGACTTGGAACGTACTGAGTGGCTACAGACAGGTGCTACGGAGACCA-----TTTGTCATTATTTGTC-CTGATGATTTTCTGTGTCCGAGAGAAGTGCTTCT--TGGGTTTATAATAAATTAAAGATAAAACAG----AAGCTGCCTATACTACTCTACTGCATACTTTCAAGATGG----------CCATTTTCTTCCTTCATAAGTGTTTTTAGTAGTGGTTATCAAATACAGACATTAATCTTGGCATTGCGTCT-AGTCAATTGTTGGCAACGTGTTCTATAGGGACTCACTCACAGAATGCAACTTGCATAAATAACTCAGTAACATGCATTAACTATTCTAATACAGCAAAAGGGTGCAAAGGAACCATCATTCAG---------------------TTA------------------CGAGACAAAGCTAAAACCTGTGGT-CACTA--AAGGGGCAATGGAAGCACCATGCTTTAAGGTGACTATGGCATGAAAGCACAATTGTGAGGCAAGTAGTT-CCAAGCAAACACACCAACCACACTATTATCACCTCTTTCTATACAAATTaaaaaaaaacaaaaaagaaaaaaaaaaaGGACATTTTGTTTTT----TATTTCCATTAGTACCAAGTAAAACTGTGGGTT-CAGTAACACAGATATTGATGGGAATGTACATTATTCCCATGATCCTTCCTCCTCGTGTTTCTGTCCATCATCATTTTTCAGCCAAGACTGGTAATATTAGAACGACCACCAGGAGGTGCCACGATGCGATGTCCAGTGCGGCGGGGGTTGTTGTCATCTATCTGAGCTCCTGCAA ..:..x....:........---.......................-..:.......x...x.:.:x.------------............x:x.................-............-...........:...x..xx.x.x..:.::..-:x.:.x....::.---.:x:..:....::.x..xxxx.x:.:x....------------------.:...:..:.:.:..x:xx.:...xx..---.x.x.x.:x.:x.:...:x.:.x....x..x:..-.:.x...-------.......:x.:.:---..x.x::..:x.xxx...:....:..........-----.:..x..:x:xx...x-xx....x..:....::x..x..x.x.:x.....:--..xxx..x::.x..x.:.x:...xxx....----.:.:x.xx::x:..x..:.x:x.::.:xx::x:..:...----------:x.x:x.....x:.-:....x.....x:.-.x..x::x...::xx:x..----::...:.....:.:....-.....:.:x.....:.:..x::..x---:...x..........------........x:...:.:............:......:...:x...x.x.x.................:..:....---------------------...------------------.:......x...............-.....--......x....:..:.........:::.....:x.x::.......--.....:....:......x.:..-................----.....x..:...:....:...x...:.-------------------...:::...:..x.:x:..:.x:..:----.x::.....:..:.....x..............-..:x.....x..:.xx:.x:..:...x....x.......x:.......xxx..x.:x::..:.:x....xx.:..---..:..:..:.....:..:..:..:..:........:..:...........:..x..:.....x.x...:.................:..x....x.. 19M3D23M1D21M12I32M1I12M1I32M1D13M3D31M18D28M3I34M1I7M7I13M3I34M5D16M1D34M2D30M4D39M10D14M1I14M1I19M4I18M1D25M3I15M6I74M21D3M18D24M1D5M2D45M2I22M1D16M4I27M19I26M4D33M1D75M3I97M 686/970 70.7% 1041/94230402 0.0% 168/970 17.3% -76355025 -17875377 +11307 chr4 + 190214555 5825489 5825488 5825664 176 CCTACCTGATAAGCTGAAGTTGGACTGGTGGAGGTTTCTGATGGGTGGGGGCTGGTGTTTAGAAGGCGAAGATTTGGCTGAAGGAGCGGGAGTTGCATATTTGGGTGTAGCTGGTACCTCGTACACAGGACCGTCATACATGCCCCTGGAAACCCCTTGCAATCCAAAAACCTAAA chr4 + 94230402 82178514 82178513 82178689 82178514 82178513 82178689 176 CTTACCTGATAAGCTAAAATTAGACTGATGGAGGTTTCTGATTGGCGGGGGCTGGTTTTTGGCAGGGGAGGATTTAGTTGAGGGTGCAGGAGTTGCATATTTTGGCGTAGCAGGGATTTCATACACAGGCCCATCATACATTCCTCTGGAAACTCCTTGCAGTCCTCCCACCTAAA .:.............:..:..:.....:..............x..:..........x...:.x...x..:.....:.:...:..x..:..............x..:.....x..x.::..:........x..:........x..:........:.......:...xxxx....... 176M 142/176 80.7% 176/94230402 0.0% 0/176 0.0% -76353025 -17877377 +11487 chr4 + 190214555 5828485 5828484 5828671 187 TCACCTTATTCCTGATTTTGACGCGCTGGTACAGGTGCTCCGGGAACGCCTTCCGCGGAATGAAGCGGCCCATGCCCTTGTTGACGTTGATGTTTCCGTCTTCAAAGACGATCTTGCCCTGGCTGATGACCACTAGTGGGGAGCCGTGGCACTCCATACCCTCGAAGATGTTGTACTCCACCGCCTG chr4 + 94230402 82180615 82180614 82180801 82180615 82180614 82180801 187 TTACCTTATTCCTGATTTTGATGCGCTGGTAAAGATATTCAGGGAAGGGTTTGCGAGGGATGAAACGGCCCATTCCTTTATTTACGTGCAGGTTCCCATCTTCATACACAATCTTCCCTTGGCTGATGACCACCAGCGGGGCACCATGGCACTCCATTCCTTCAAAGATGTTGTACTCAACAGCCTG .:...................:.........x..:.::..x.....x.x:..x..x..:.....:........x..:..:..x....xx.x...:..:......x.x..:.....x..:..............:..:....x:..:...........x..:..:..............x..x..... 187M 149/187 79.7% 187/94230402 0.0% 0/187 0.0% -76352130 -17878272 +3067 chr4 + 190214555 5833917 5833916 5833975 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -70199289 -24031113 +12733 chr4 + 190214555 5835910 5835909 5836095 186 CTTACCGACTTGTGACTTTTGGCTGTTATGGTCTTCAACTTGTCGGGGTCCCAGATGACCACGTCGGCATCCGAGCCCACGGCAATCCGCCCTTTCCTTGGGTACAGGTTAAAGATCTTGGCTGCATTGGTGCTGGTGACAGCGACAAACTGGTTCTCATCCATTTTGCCAGTAGCCTACAGGCAA chr4 + 94230402 82182035 82182034 82182220 82182035 82182034 82182220 186 CTTACCGATTTATGGCTTTTAGCTGTTATAGTCTTCACCTTATCAGGGTCCCAAATAACAACATCAGCATCTGAACCAACAGCAATCCGGCCTTTTCTTGGATACAGGTTGAAGATTTTGGCAGCATTGGTGCTGGTGACAGCTACAAATTGGCTTTCATCCATCTTACCTGTGGCCTAAAAACAA ........:..:..:.....:........:.......x...:..:........:..:..x..:..:.....:..:..x..:........x.....:.....:........:.....:.....x....................x.....:...:.:........:..:..x..:.....x.::... 186M 152/186 81.7% 186/94230402 0.0% 0/186 0.0% -76346125 -17884277 +9573 chr4 + 190214555 5836760 5836759 5836909 150 CTTACCACCGCCTTGTCCCAGACGACCGTCATCCGCTCCTCTATCCCGTTGACACCCTCGGGGATCAGGGTAAAGTTGTCCTTGCCCACCGCCTTCTGGGCAGTGCTGTAGGGACAGTGGCCGCTGCCTGTGACCTGCAAGTCCCCACTG chr4 + 94230402 82183686 82183685 82183835 82183686 82183685 82183835 150 CTTACTACAGCCTTGTCCCAGACAACAGTCATTCTCTCCTCAATTCCATTGACCCCTTCAGGAATCATAGTGAAGTTGTCCTTTCCGATGGCTTTCTGGGCAGTGCTGTAAGGGCAATGTCCACTTCCCGTCACCTGCAGGTCCCCACTG .....:..x..............:..x.....:.x......x..:..:.....x..:..:..:....x:..:...........x..x.:x..:.................:..:..:..x..:..x..:..x.......:.......... 150M 120/150 80.0% 150/94230402 0.0% 0/150 0.0% -76346926 -17883476 +3086 chr4 + 190214555 5838951 5838950 5839002 52 GCCCTGCTATTGCTAAGTGCTCTTCCCTCCTGGTGGCTAACAGAAGGGAAGG chr4 + 94230402 15501765 15501764 15501816 15501765 15501764 15501816 52 GCTCTGCCACTGCCAAGTTCTCTGCCCTCCTGGTGGGCAACCCAAGTGAAGG ..:....:.:...:....x....x............x:...xx...x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -9662814 -84567588 +11251 chr4 + 190214555 5839513 5839512 5839724 212 AGGTCTCACCAGGCCAGTAGGGAGGTCAAGTAGTCGGGCGTGGTAGGGTCCGGGCTCAGGGGAGGGGAAGTCACGAACGCCGCAGCCTTGGCCCAGTTCTTGCTCCAGTAATGGGTGCCATCGGTCCCCAGGCTGGCGGCAATGGGCTCTCCAAAAACTAGGGGCCCTTAGGAGGGGAAAACATAAGC-----CTGGTTAAAAGCAAATACTCTCTT chr4 + 94230402 82187436 82187435 82187649 82187436 82187435 82187649 214 AGGTCTTACCATGCTAAAAGCGAATTTAAGTGATCTGGAGTGGTAGGATCAGGGCTCAGAGGTGGTGAGGTCACAAAAGCTGCAGCCTTGGCCCAGTTTTTGCTCCAGTAATGCGTCCCATCTGTCCCCAAGCTGGCAGTGATCGGCTCTCCAAAAACAAGGGGACCTTTGGAAAAGCAAGGATATACAGGAACTGATTACAATC---CACTCTCTT ......:....x..:.:x..x..:x.:....::..x..x........:..x........:..x..x..:.....:..x..:.................:..............x..x.....x.......:......:.::..x..............x.....x....x...:::.x..:x...x:.-----...:...x..x.---:........ 188M5I12M3D9M 163/209 78.0% 214/94230402 0.0% 8/209 3.8% -76347923 -17882479 +8567 chr4 + 190214555 5841305 5841304 5841433 129 TACCTTTCTTCCTGGCCAGAGCGATGATGTCGGCTGCACTCTTGCTCATGACCTTGGTGATGTACACAGGGCAGTTGATCCGGCCCGCAATGGTGATGGCCCGGAACACCGCCTCGGCCTCCAGCTGAA chr4 + 94230402 82189123 82189122 82189251 82189123 82189122 82189251 129 TACCTCTCTTTCTGGCCAGTGCAATGATATCAGCTGCACTCTTACTCATCACCTTGGTGATGTACACTGGGCAATTTATTCTACTGGCAATGGTGATGGCACGGAAAACTGCTTCTGCTTCAAGCTGAA .....:....:........x..:.....:..:...........:.....x.................x.....:..x..:.x:.:x..............x.....x..:..:..x..:..x....... 129M 106/129 82.2% 129/94230402 0.0% 0/129 0.0% -76347818 -17882584 +3011 chr4 + 190214555 5842306 5842305 5842371 66 GTGCTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACCCAGGAAGCGGAGGCTGCAG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x.:.:.........::........x.xx.x..:x.............:.:x:xx:.....:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -70190906 -24039496 +6341 chr4 + 190214555 5843074 5843073 5843200 127 CAAGTTGAGGAG---TCCTTACCTCTTCAGGTCTGCTCAGGGCATGGCCCTCGGGACCCGTGATGCCCATCTCCAGGATCCGCTTTTGTTCCTACAAGACAAGA-ACAAGTGAGTTAACGATTAGAGGGTG chr4 + 94230402 82191032 82191031 82191162 82191032 82191031 82191162 131 CAAGATGAGCAAAACCTCTTACCTCCTCAGGCCTGCTCAGGGCATGTCCCTCTGGTCCCGTGATTCCCATCTCCAGGATGCGCTTTTGTTCCTGGAACATAACAGAGAAACGTGACAACCATTTCAGGATG ....x....x.:---::........:.....:..............x.....x..x........x..............x.............:x..x.:..x.-.x..::.x.x:...x...xx...:.. 12M3I89M1I26M 100/127 78.7% 131/94230402 0.0% 4/127 3.1% -76347958 -17882444 +6686 chr4 + 190214555 5849385 5849384 5849492 108 CACTCACCTGAGCTATCAAATCTCCATTTTCTGCATGGACCAAGATCACAGCTCCCAGGCCCTTAAGGAAGGTAAAGGCTTCATAGAGCTATGGAGAG-ATAAACAGGG chr4 + 94230402 82194028 82194027 82194136 82194028 82194027 82194136 109 CACTCACCTGAGCTATCAAGTCTCCATTTTCAGCATGCACCAGGATGACAGCCCCAAGGCTTTTTAGAAAGGTAAAGGCTTCATAAAGCTGCAGGTAGTACAAAGAAGG ...................:...........x.....x....:...x.....:..x....::..x..:.................:....:::.:x..-.:...x.:.. 98M1I10M 88/108 81.5% 109/94230402 0.0% 1/108 0.9% -76344643 -17885759 +6076 chr4 + 190214555 5851405 5851404 5851492 88 TACCTGGCTGTCGGACATTTGGTAGACATCCTTATAGGCCATGTAGACTTGGAAGGAATTGACGCCTGTTTCAAGATAGAAAGGATAG chr4 + 94230402 82195789 82195788 82195876 82195789 82195788 82195876 88 TACCTGGCTGTCAGACATTTGGTAGAGATCTTTGTAGGCCATGTAGACTTGAAAAGAGTTAACACCTGTTCCAAGACAAAATGCAAAG ............:.............x...:..:.................:..:..:..:..:......:.....:.:..x.x.x.. 88M 73/88 83.0% 88/94230402 0.0% 0/88 0.0% -76344384 -17886018 +3071 chr4 + 190214555 5851949 5851948 5852021 73 GGGAGAAGAAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGAAAGAGGACGAGGAGGAGGAGGA chr4 + 94230402 82649571 82649570 82649643 82649571 82649570 82649643 73 GGGAGTTGAAGGAGAAAGAAGAAGGGGAAGAGAAAAACAGACTCGATAAGAATGTAGATGAGGATGTAGAGGA .....xx.......:....:....:...:...:..:.x::.xxx..x:....x.x:..:.....x.x:..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -76797622 -17432780 +13241 chr4 + 190214555 5856137 5856136 5856320 184 ACTGACCTTTGTCCTGCACCAGCACCTCCAGCTCCTCCCGAACGCCATCGTACCAGCTTGTGATGTCCACGTGGAGGGAGTAATCACAGCAGGATTTGGTGTCAGCTGCTTCGTGCCACTTCTCGAAAGAGGTCAGTAGGCTGGACCCAGGTTCAGGAACAACATGGTCAACTGGGACAGAGAA chr4 + 94230402 82200220 82200219 82200403 82200220 82200219 82200403 184 ACTAACCTTTGTCTTGCACCAGTACTTCCAGCTCCTCTCGAATCCCATCATACCAGCTAGTGATGTCCACGTGGAGAGAGTAATCGCAACAAGATTTGGTGTCAGCTGCCTCGTGCCACTTCTCAAAGGATGTCAGTAAACTTGATCCAGGTTCTGGAAGCACATGGTCAACTGAAAAACAGAA ...:.........:........:..:...........:....:x.....:........x.................:........:..:..:.................:..............:..:..x.......::..x..:........x....xx.............::.x.x.... 184M 156/184 84.8% 184/94230402 0.0% 0/184 0.0% -76344083 -17886319 +12171 chr4 + 190214555 5861020 5861019 5861247 228 ACTCACTGATCATCGTGGTCCCGCCCACCAGTGCCGCCCTGGTCCCTTGGAAGAAGTCATCAGCCGCAGTCATCCCCTGGGAGGGCTTCTGCAGGTACGTGTTGACATCAATACCTCCGGGAATAACCATCCGCCCGTTGGCTTCAATGGTCTTCACTCCACCAGGAACGATTAAGTTCTCTCCTATTTGTCTGGAGGCAAACAACAGAGACAGCCTTGGTT--CTTAAA chr4 + 94230402 82201832 82201831 82202059 82201832 82201831 82202059 228 ACTCACTGATCATGGTGGTGCCCCCTGCTACTGCTGCTTTTGTGCCTTGATAGAAGTCATCAACAGTAGTCATTCCTTGGTAGGGCTTTTGTAGGTAAGTGTTGACATCTATTCCCCCAGGGATAACCATGCGCCCATTAGCCTCTATGGTCTTGACTCCTCCAGGAACAATCAGATTCTCTCCTATTTGCCT--AGGCAGCAAGGAAAGGCAATATTACTTTACTTAAA .............x.....x..x..::.:.x...:..::.x..x.....:x...........:.x.:......:..:...x.......:..:.....x...........x..x..:..:..:........x.....:..:..:..x........x.....x........:..:.::..............:..--.....:xx.:x.:..:..::x..:x..--...... 193M2D27M2I6M 174/226 77.0% 228/94230402 0.0% 4/226 1.8% -76340812 -17889590 +7257 chr4 + 190214555 5866643 5866642 5866774 132 AAAAGGTCCGT-TTTGATCAACCCACTTGATAAGTCCATCCTCCAGGTAGACGTCAGCATAAAGGGATTGGTCATCGTTGATGATCCGTCCACCTTTGATGAGGAGTCGGTCACTCTGCAAAGCAAGGCAAAG chr4 + 94230402 82206816 82206815 82206948 82206816 82206815 82206948 133 AAAAGTTCAATATTTAAAAAACCAACTTTATAAGTCCATCTTCCAGGTATAGGTCCGCATAGAAGGAGTGGTCATCATTGATAATTCTTCCACCTTTAATGAGTAGTCGGTCACTCTGGGAGGGAAGAAAAGG .....x..x:.-...:.xx....x....x...........:........x.x...x.....:.:...x........:.....:..:.x.........:.....x..............x:.:.x...:x..:. 11M1I121M 104/132 78.8% 133/94230402 0.0% 1/132 0.8% -76340173 -17890229 +7451 chr4 + 190214555 5888061 5888060 5888705 645 GCTGGGGGAGGGGGCTGAAATCCCGAGACCGGCCCCGCCCCACCCGCGGCGACGCAGGAGGCCTCGGGGGGCGCCCCTGCCGGCGCCCCGTGGA-TCTGGACC-CTGCCGGGCGCCCACTCCCAGCCCACAAAGGCCAGCGCGGGGCGGCGGGGGCGGGGGCCGCTTACCGTGATGTGCGGGATGCTCTTCTTGCCCTGGTACGACATGGCCCCCTCTGGCGCCCTCGGCCCGGCCGCTGACCTGCGGGGC------------------TGTCTGACTGGAACCGGCGCTCTCGGCCCCGCTCCCAGCGGGCGCGCTGACAAAGGCCCGGGAGGGATA-GAGACACGGACGGAGGCTCGGCGCCCG--TGGATGCCCACGCGCGGCTGCCCCGGCTGCTCGGCCCGCCCGCCGCCGCTCCGGCTGCCAGCACCGCCCGGATCG------GCGAGGAGGGCGGGAGAAGGAGGAGGGAGAGGCGAGGGCGGGAGGAGGGGGCTGCAGACAGCTCCTCCCGGCGGCGCGGAGCGAAGCCGGATTCGCCCCTCTCGGCTCGAACCAGGAAGCGCTTC---CCTTCCGATCTCCCACCCCG---CCCCCCGCCC---------------------CCCACCCGCCCAGC----CCCGCCGACCCCCGCCCTGCGCACACGCCCTTGGCGGGCCCTGGCCTCGCTCTCGC chr4 + 94230402 82217752 82217751 82218380 82217752 82217751 82218380 629 GCTGCGGAAGGAGGGGGTGGCCCCGCTGCCGGCACC-------------------------CCCCGAGCTCCGCTCCCCACCGCCCCCCGCGGACTCTGCGCGGCCGCTGAGCGCC-GTTCCCCGCCCGCTATAACAAAGGCGCGGGGACACCGCCAGGCTGCGCTTACCGTGATGTGGGGGATGCTCTTCTTGCCCTGGTACGACATGTC-------GGCTCCC---GCCCGGAACGCGCCCCGAAGAGCGAAAGAAAAATAACGGTGGGGATAACGGGAATAAGGG----TAATTCGGATGCTGGGGAGGGGCGGGGGGAAGACCCTGCGGAGCTGTGTAATGGAGGCAAAGTTTCCTCGCCCGGAGGAAGGGGAGCGCCAGGCGGAGCCGGCACCTT-------------TTTTTCCAGCTG-CAATAAAACTTGGGACGCGGCTcccggggggggggggggtcggcgggcgcTGCCTCTCCGGCGGCAGCAGCG-------------CCCTCCCGGC--TGCAGGTCGGAGCGGGATTCG-----CTCGGCTCAACCCAGGAAGCGGTTCCTTCCCTCCTGTcccccacccctaccccccccgcccccgtcgccccccctttccctgcccatcaacccagccactccctcccacaccggcgctg-gcaaacgccgcccac-ggccccggccccgccgccgc ....x..:...:..xx.x:::....xx:.....x..-------------------------..:..:.xxx...:..:xx.x..x.....:...-....x:.x-.:..:.:.....-::....x....:.x.x::.x.:x...x..x.:.:xx.x.:..xxx................x..............................x.-------...x...---......xxxx:.x..:.x:.:..------------------x.xx.:..x....:x:.x.----:::::.x.x.x.::.x.:.x.xxxx.:x:...:...x.x:.:.x.:-.x:.::x:.:.::..x:..xx......--x.:.x.xxx:...xx...x.xx.....xx..:-------------::x:...:....-..::.xx:.::..:x..------x..:..:...x...:.xx..x..:x.xx.xxx.xxx.....x..x..x.-------------:.........--:..:.:x..:...x.......-----........:.x..........x...---..:...x:..:........x---..........---------------------....:.x:......----...x..x..x..x..x...-...x.....x::x:.-.....:....:...:x:... 36M25D33M1I8M1I12M1D94M7D7M3D23M18I19M4D46M1I27M2I32M13D12M1D17M6I49M13D10M2D21M5D25M3I20M3I10M21I14M4I19M1D15M1D20M 370/569 65.0% 629/94230402 0.0% 136/569 23.9% -76329691 -17900711 +16294 chr4 + 190214555 5892468 5892467 5893162 695 TCCCCAGCCTGGCGG-------CCGCTGC--CCCAACACCGGGGCC--CGGGCATGGCCCTCGGGCGCCCCATGCCCTGGGTCC-TCCCGGGGCCCGCCCCCCTCGTCTGGCCCG---CGCGCGCCCCGAGGGTACCTGGCCATTGTCCCGGCCGAGGGGCAGGTCGCGGGGCGCGGGGCGGCGGATGCGCAGCGTCGGCGGCCGCTCGTCGCGCTCTCCGGGAGAGCTGACCGCGGAGCCCGAGGGCTCGCTCACGTCGCTGGCCGTGTCCTCGCTG-------CCTCCCGGCCCTGGCAGCCCGACCGCGTCGGGCCGGCCAGCGCTGCGCGGCGTGCGCGCCGAGCCGCGGCGGCCCACACTGTAGGCGTCGAAGTCGATGGTCTTGTTCTCGTAGGCGCCCTCCACCGCGGCGAACATGCCGCCGTACTTCTGGCGCGGGGTCTGCGCCGCGCTGCCCGGCCGCGCCAGGTACACGGGCAGGTCGTCCTCGGTGTTCCACGCGCGCCGCCGGTCCGCCATACCCGTCCAAGGCCGGCCACCCACCGCGCTCCCGCCTGCCCGCCCGCGGCCCTGGGCACCGCCGTGCGCCGCGCTCCGCGCCTCGGTGCGGGCCTGCGGCGGCCCGGGCGCGACTGCGGCCCAGGGAGGGGAGGGGCGGGGCGTGGCGCGCGCCGGGGCGG-GGCCGGGGCGGGGCCTCTGGGCGGCTGCGGGC chr4 + 94230402 82218773 82218772 82219430 82218773 82218772 82219430 658 TCCCGGGCCGGGCGGGCCCCTCCCGCTGCATCCCCGTGCCAGGACGGGAGGGCAGCGCCTCC-----CCCCACCTCCCAAATACATTCCATATCCCGTCCCCCGAGGCAGTCCCAACCCCCGTGTCCC-CGCTCACCTGCCCATTGTCGGGGCCCTGCAGCAGCTCCTTCCCCAGCGGGAAGCGGATCTCCACGCCCGGAGTCTTGTCCTCCCGTTCCCCCGGGGAGCTGATGACGGAGCCCGACACCTCGCTGATGTCGCTGGCGGT---CTCGCTGTAGTTGTCCCCCCCGTCCAG----------CATATCGTGCCGGCTGCCGCTCCGCGGGGTGCGCG---ATCCCTTCTTCCCCACGCTGTAGGCGTCGAAGTCGATGGTTTTGTTCTCGTAGGCCCCCTCCACCGAGGCGAACATCCCCCCGTATTTCTGCCGCGGTGTCTGCGCCGTGGTCCCCGGCCGGGCCAGATACACGGGCAGGTCGTCTTCTTTATTCCAGTTCCTCTTTCTCTCGGCCATTCTCGCC--GCGCGGGTCTCTC-CCTCGTTCGCTCTCTGCCTCCCACTTCTCTG-----CACCTTCTGCTAC-----------CGGGATAGGCTGCCGGTGA------------------CCATAAAAATGAATGGACGGCTGCGGCG-GCGCGGGGTTGGCTGCCGGGATGCTGCCCTTAGGGAGATGCAGGC ....x:...x.....-------.......--...x:::..:..:.x--x.....xx...::.-----.....:x:..::::.x.-.:..:x:x....:.....xx.x.x.x...:---.x..:.:...-x.xx:.....x........xx....xx.x:....x..x:xxxx.:xx...x:......x:x..xxx:...x.x.:xx..x..x..:..:..x..:.......:x:..........x:x......x.:.........x..---.......-------..:...x.:..x.----------.:::...x......::x....x.....x.......---.x..x:xx:xx.....:.......................:..............x..........x.........x..x.....:.....x.....x..........:.x.x........x.....:.................:..xx.:.....xx:x.x.:x:.xx..x.....x.:..:.--:x..x..:.x.:.-..x..:..x.x.::xx..x...:.xx.:...-----.:..x.x:..::.-----------...x:::...:xx...:.:------------------...x::.::x..:x..xx..x:.:....-....x...x:..-x......::.xx...::.:..x:.x...:... 15M7I7M2I15M2I14M5D17M1I30M3I10M1D139M3D7M7I13M10D35M3D185M2D13M1D31M5D13M11D19M18D28M1D12M1I32M 432/635 68.0% 658/94230402 0.0% 83/635 13.1% -76326305 -17904097 +7528 chr4 + 190214555 5897601 5897600 5897742 142 AAACCCTTTAATTGTGAAAAAGCATACATTTTAATGTACAAAATTACACAAATTATACATTTAACTCACATAGAAAAATACATCTCAGTAACAAGAGAAAATGCCGGCCTATTTTACACAAATGGAGCGATCATTACAAATC chr4 + 94230402 82225057 82225056 82225195 82225057 82225056 82225195 139 aaagtttttaatttaaaatatGCATACATTT-AATATACAAAATTGTACAAATTATACATTTAACTAACATAGAAAAATACATCTTGTTAACAAGATAAAATGTCAACATATCTTACATAATTTGTGAGA--GTTACAAATC ...x::.......xx:..x.x..........-...:.........::...................x..................::x........x......:.::.x...:.....:..x.x.x.x..--:......... 31M1D98M2D10M 112/139 80.6% 139/94230402 0.0% 3/139 2.2% -76327456 -17902946 +3046 chr4 + 190214555 5911704 5911703 5911772 69 TAGCAAATGTTTAACAACTGGCTCTCAAAACAAAAACAAAAACAAAAACAAAACAAACAAAACACTAGG chr4 + 94230402 65216808 65216807 65216876 65216808 65216807 65216876 69 TAGCAGTTGTATAGCAGCATTTTTATAAAACAAAAACAAAAACCAACACCAAACAAACAAGAAAAGAGG .....:x...x..:..:.xxx:.:x:.................x..x..x..........:.x.xx... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -59305104 -34925298 +3552 chr4 + 190214555 5911907 5911906 5911988 82 ATGGTGGTGCATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCGGGAAAATCGCTTTAACCCCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::........:.--..................::........x.xx.x:..x.:...x.....x.:..x:xx:..:..:.. 13M2D67M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% -70121291 -24109111 +4464 chr4 + 190214555 5913142 5913141 5913228 87 GGGCAAGTTACTTAACCTCTTTCTTCCTCAGTTTTCCCATCTGTAAAATGAGGATGACAA----CGCCTACCTTATGGGGCTGGTGTAAAG chr4 + 94230402 83501147 83501146 83501237 83501147 83501146 83501237 91 GGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGG ......:...........x.x.x.x..............:..........::.x...:.:----::.......:.::...x.:x...:.:. 60M4I27M 66/87 75.9% 91/94230402 0.0% 4/87 4.6% -77588005 -16642397 +3024 chr4 + 190214555 5939111 5939110 5939185 75 GGCACCTATGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x::....:.:.........:x.:........x.xx.x...x.:........::.:..x:xx:..:..:.. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -70094092 -24136310 +3449 chr4 + 190214555 5975004 5975003 5975082 79 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -70058197 -24172205 +3408 chr4 + 190214555 5975145 5975144 5975206 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACATCACAGTGTTTGCACACAATTAA chr4 + 94230402 25021110 25021109 25021171 25021110 25021109 25021171 62 AAAAAAAAAAAAAAAGAATAGAAAAAAATACAGAATCCATCACAGTTTTTACAGATACTTAA ...............:..x.:.......x.x.:.x.x.........x...:..x.:.x.... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% -19045965 -75184437 +3149 chr4 + 190214555 5984851 5984850 5984908 58 AAAAAAAAAAACCAAACAAAAAAATTAAAACAAGCAGGACAAAAACAAATAAAACCAT chr4 + 94230402 72335452 72335451 72335505 72335452 72335451 72335505 54 AAAGAAAACAAACAAACAAAAAAATTGAAACAAAAAAGACAA----AAATCAAACCAT ...:....x..x..............:......:x.:.....----....x....... 42M4D12M 46/54 85.2% 54/94230402 0.0% 4/54 7.4% -66350601 -27879801 +3036 chr4 + 190214555 5987281 5987280 5987353 73 TGTGCCTGTGGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCTGGGAGGTGGAGGTTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x...:.::...........::........x.xx.x...x::........::.:..x.xx:..:.::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -70045924 -24184478 +3019 chr4 + 190214555 5987545 5987544 5987597 53 TGGGGAGGAAAGAGAGAAAGGAAAGAAGGAAGAGAGAGACAAAGAGAGAAAGA chr4 + 94230402 10675420 10675419 10675470 10675420 10675419 10675470 51 TGGGAAG--AAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGA ....:..--.....................:.:.:...:..::.:.:::.... 7M2D44M 40/51 78.4% 51/94230402 0.0% 2/51 3.9% -4687875 -89542527 +4252 chr4 + 190214555 5987549 5987548 5987733 185 GAGGAAAGAGAGAAAGGAAAGAAGGAAGAGAGAGACAAAGAGAGAAAGAGGGAAAGGAAGGCAGGAGGGGGAGAGCAAGAGACAGAAAGATGGAGAAGGAGACACAGAGACAGGAAAGGAGGGAGAGAGGGTGGAGCGAGATGGGAGAGAGAAATAGAGAT----------AGAAAATGGAATGAATGAATGCCA chr4 + 94230402 1317417 1317416 1317603 1317417 1317416 1317603 187 GAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGA---AGTGGAAATGAGTCAGGAGGGAGGG---AAGAGAGAGCACAAGTGGGAAGAAA--TCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAATGCCA ......::..::..........:::....:.x..x....:x....---..x.:..:x:..x........:.:.---......x..x.x:.xx.:....:.:--x.x.::x:x:.......:..:x..xx:x:...::.::.x:......xx..:x....x:----------.:.x.....::x...x:....... 45M3D25M3D25M2D58M10I24M 113/177 63.8% 187/94230402 0.0% 18/177 10.2% 4670132 NA +3085 chr4 + 190214555 5987583 5987582 5987652 70 ACAAA--GAGAGAAAGAGGGAAAGGAAGGCAGGAGGGGGAGAGCAAGAGACAGAAAGATGGAGAAGGAGACA chr4 + 94230402 10675414 10675413 10675485 10675414 10675413 10675485 72 ACAAATTGGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGAGTATGAGTCA .....--.:..::.....:........:.x.........:::...:.:.:x....::.xx...x.x...x.. 5M2I65M 50/70 71.4% 72/94230402 0.0% 2/70 2.9% -4687831 -89542571 +3757 chr4 + 190214555 5993677 5993676 5993759 83 CATGGTGGTGGGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATAGCTTGAACCCGGGAGCTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:x.--....:.:...........::........x.xx.x...xx:.........:.:.....x:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -70039520 -24190882 +7617 chr4 + 190214555 6003952 6003951 6004428 477 GTGATGGTGATGATGTGATGGCGATGATAGTGATGATGGTGATGATGGTGATGGTGATGATGTGATGGTGATAATGTGATAGTGATGATGGTGATGGTGATGATGGTGATGATGGTGATGGTGATGATGTGATAGTGATGATGGTGATGATGGTGA---TGGTGATGATGGTGA---------TAGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATAGTGATGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGATG-ATGTGATGGTGATGATGATGGTGATGATGGTGATGGTGATGGTGGTGATGGTGATGGTGATGTTGGTGATGATGGTGATGGTGGTGATGATG----TGATCGTAATGGTGATGATGGTGATGGTGATGATGACGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGGTGATGGTGATGGAGATGTTGGTGATGATGGTGATG chr4 + 94230402 92132438 92132437 92132916 92132438 92132437 92132916 479 gtgacagcatttctgctacaGCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGT-------TGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATG--------GCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG ....::.::x.xx..:x.::..:::.x.:.x..::x...x....x...::...x..:x.::x.x.x...-------..x.:.x..:.xx..x....x...x..::x..:x:...x..:x.:x....--------.::...x...x....x..:x..---...x....x...x..---------..x..:x..:xx..:x.:..x...x.:..x...x..x.x.:.::..:x...x..::x...x:.::...:x....x..:x.:..x..:x.:::x...x...:-x..x..x.x.:::::..x...x..:xx:..x..::x.x.x.:..x...x.:x.......:.:....x....x...x....x...x....x..----..x.x.x..:.x..:x..::x..:x..x.x.xxx::x....x...x..::x...x....x..:x..x.x..:::..xx..xx.:::x...:..:::...x...:x...x..:. 69M7D50M8D22M3I15M9I101M1I92M4I113M 271/462 58.7% 479/94230402 0.0% 32/462 6.9% -86128486 -8101916 +8458 chr4 + 190214555 6004042 6004041 6004473 432 GTGATGGTGATGATGGTGATGATGGTGATGGTGATGATGTGATAGTGATGATGGTGATGATGGTGATGGTGATGATGGTGATAGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATAGTGATGATGGTGA------TGATGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATGTGATGGTGATGATGATGGTGATGATGGTGATGGTGATGGTGGTGATGGTGATGGTGATGTTGGTGATGATGGTGATGGTGGTGATGATGTGATCGT----AATGGTGATGATGGTGATGGTGATGATGACGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGGTGAT------------------GGTGATGGAGATGTTGGTGATGATGGTGATGGTGGTGATGATGTGATGGTAATGGTGATGATGGTGATGGTGATGA chr4 + 94230402 92132461 92132460 92132914 92132461 92132460 92132914 454 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTT--TAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTG--GCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTG--GACATTGGGGACACTGGGGATACTGGGGA .:.x...x..::x...x....x...::...x..:x.::x.--...x.x..x...x..:.xx..x....x...x..::x..:x.:..x..:x.:x.....::...x...x....x...x..:.x..:x....x..:------x..::..:x...x..:xx...x....x...x....x..:x.:x.x..--.::..:x..:x..::x...x:.:::...x....x..:x.:..x..:x.:::x...x...:..x.x..x.x.:.:::..x...x..:xx:.x.:x.:.----:...x...x..x.:..:....:x..:x..:.x..:x.:..x..:x.:..x...:....x...x:.:.x...x..:------------------....x...:..::....x....x...x..x.x...:::.xx....--.::.x...x..::x...x...:x..:x.. 40M2D93M6I47M2D97M4I75M18I45M2D29M 259/426 60.8% 454/94230402 0.0% 34/426 8.0% -86128419 -8101983 +7010 chr4 + 190214555 6004340 6004339 6004796 457 TGGTGATGATGACGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGGTGATGGTGATGGAGATGTTGGTGATGATGGTGATGGTGGTGATGATGTGATGGTAATGGTGATGATGGTGATGGTGATGAGATGAGCACAAGCCCAGGAAGAGATGAGGAGGAGGGTGGCAATGGTGATGGTGATAGTGATGAGGGTGGTAATGGTGATGATGGTGATGGTGGTCATGGTGATGGTGATGTTGGTGATGATGGTGATGGTGATGATG-TGGTGGTGATGGTGA---TGGTGACTGTGATGGTGATGGTGATTATGGTGATGATG----TGATGGTGATGTTGATGGTGGTGGTGATGGTGATAATGGTGA------TGGTGGTGAT----GATGTGATGGTGATGATAGTGATGATGGTGATGATGGTGATGGTGATGACAGTGATGACGGCGATGGTGATGGTGGTGATG chr4 + 94230402 92132474 92132473 92132916 92132474 92132473 92132916 443 TGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAG-----------GACATTGGGGATGTTGGGGAAACGGACA---------------GTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGG---AGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGA---CACTGGGGATACTGGGGACG ...x....x..:.::..x...x.::xx.:.x.x..x..:x..:.xx.:x.:..x...x.:::x...::.......x..x.....::...x...x....x..x.-----------..::x...x....x..:x..:.:.::..---------------:.:xx.:...xxx...x:...x...x.:..x.:.x..x.xx..:::..x...x..::x...x:.::....---x.:..x...x........x..::x...x...:x.x:x..x.-.:.::...x...x..---:..x...xx.x.x.:..x..:x..xx......:.:x..----..x...x.......:x.:..x...:....x..:x..:.x..:------...x..x.x.----.:x...x...x..::x.:.x....x...x..x.x...:::.xx..xx....x..:x..---.:x...x...:x...x..:. 103M11D28M15D70M3D41M1I15M3I38M4I42M6I10M4I58M3D20M 263/425 61.9% 443/94230402 0.0% 50/425 11.8% -86128134 -8102268 +12191 chr4 + 190214555 6026190 6026189 6026384 195 AAAGGATACCAACCCGAGTTCTTGGCTCACTGAAGTCATCAAGGCCACAGAATGAATGCTAGTGAGAAAAACAAAAAAAGGAACAAAAACTATAAAATAATACCAAAAGAAAATGAGGAAAAGAGAAGAAAAAGAAAAGAAAACAGATGTAAGATATGTAGTATGGAACT-CAATGACAGCATTTTACAAGAACTA chr4 + 94230402 82303676 82303675 82303862 82303676 82303675 82303862 187 AAAGAATACCAACCACATGTCTTGGCTCAGTTGTGTCATCAAGGCCACAGAATGAATGCTAGTGaaaaaaacaaaaaaaggaacaaaaactataaaataagatcaaaagaaaatgagga---------gaaaagaaaagaaagaagaTGTAAGATATGTAATATGAAAATCCAATGACATAGTTTTACAGCAGCta ....:.........xx.xx..........x.x:x...............................:..................................x.:................---------:.............:x................:....:..x.-........xx:.......:x.:... 119M9D42M1I25M 162/186 87.1% 187/94230402 0.0% 10/186 5.4% -76277486 -17952916 +4504 chr4 + 190214555 6029676 6029675 6029789 114 GGAAAGAAACCTGGGGACAGTCTGAGCTGCAGTCACCTACCTTTTCCTCCAGTTCTTTCAGGTGCCGCTTCTGAAACTCCAGTTTGTCCTCCAGTTCTCGGATTCTCTGAAATA chr4 + 94230402 82305268 82305267 82305377 82305268 82305267 82305377 110 GGGAAAATCACTGTTAACAACCTG----GTGTTTATTTACCTTTTCCTCAATTTCTTTGAGTTGCCTTTTCTGAAGTTCTATTTTATCTTCTAGTTCACGAATCCTCTGGAACA ..:..:.xxx...xx:...::...----.::x.:.::............x.x......x..x....x:.......::..:.x...:..:..:.....x..:..:.....:..:. 24M4D86M 76/110 69.1% 110/94230402 0.0% 4/110 3.6% -76275592 -17954810 +15667 chr4 + 190214555 6035898 6035897 6036249 352 GCCTACCTGCTGGGCCTGCTGCAGCAGCTCCATGCGCTCCCGCAGGATCTGGCTGTCGAACTCGCGGCTCTGCCTGAGGATCTGCCTGCGCACCTTTTCCACAGCAGCCTGCAGGTCCTCCCGCTGGCCCTCGCTCAGCGCCTCACCGGCCCTCCGCCCCGGCTCCTGCTGCAGCGCTGTGTACAGTGTGGCCTCCAGGTCTTGGATTTTCTGAGG-ACCCCAGATCAC--ACAGACAGA--------GGAAGGTCACAAGGAGGTGGACAGGAACCACCAGAAGGCTGCTGCCAGTGGAGGCAGAGCCAGGGAGGGGGGTTTCGGGCAGGGAGGGGCA-----ACTGGCAGGGGCCAAGCACAGGGC chr4 + 94230402 82319731 82319730 82320083 82319731 82319730 82320083 353 GTTTACCTGCTGGGCCTGCTGTAGAAGCTCCATTCGCTCGTGCAAGATCTGGCTGTCAAACTCACGGCTCTGCCTCAGGATCTGCCGCCGCACCTTCTCCACAGCAGCCCGCAAGTCCTCCCTCTGGGCTTCGGTCAGCGACTCACTCGCCCGCCTTCCCGAGTCCTGCTGCAGGGCATTATACAGCGTGGCTTCCAGCTCCTGGATTTTCTAAGGCAACCCAAATCACATACAGACAGGCTGCCGTTTGAACCCAGCAA------GCACACAACCCAC-------CCGCAGCTCGAGGAG--AAGGCCAGCGAGCACAGCCGTGGGCAGGAGGGAGGAAGGACACAGACACGGGACAGGAACAGGAC .::..................:..x........x.....x:...:............:.....:...........x..........xx........:............:...:........x....x.:...x......x.....:x....x..x:....:x...........x..xx.:.....:.....:.....x..:..........:...-.x....:.....--........:--------x...xx:x:...------.x...x:.x....-------.:..x..:x.x....--.::.....x...x:x:.::x:.......::..:.x.-----..x.:..x...x..:.x.....:. 216M1I12M2I9M8I12M6D13M7D15M2D36M5I24M 260/337 77.2% 353/94230402 0.0% 31/337 9.2% -76283833 -17946569 +6005 chr4 + 190214555 6040627 6040626 6040721 95 TTCTGGTCCTACCAGGTAAGCCTGGTCAAGGGCTTGCTTCCGGTAGTCGAGCTCCTCTTCCAGGTAGCCCTTCTGCCTGCTGAACAGGTCCTGAG chr4 + 94230402 82321494 82321493 82321588 82321494 82321493 82321588 95 TTCTTTTCCTACCATGTATGCCTGGTCCAGTGCTTGTTTCCTGAAGTCGAGTTCTTCCTCTAAATAACCCTTCTGTTTACTGAACAGGTCCTGAG ....xx........x...x........x..x.....:....x.x.......:..:..:..:.::..:........::.:................ 95M 76/95 80.0% 95/94230402 0.0% 0/95 0.0% -76280867 -17949535 +5517 chr4 + 190214555 6042155 6042154 6042240 86 TTACCTTCTCCTTCTCCAGGTCCAGCATCTTCTGGGTCAGGGCGGCCTCGGTCCCCTCTATTTGCTTCAGCCACTA---GAAAACAGCA chr4 + 94230402 82323651 82323650 82323739 82323651 82323650 82323739 89 TTACCTTCTCATTCTCCAGGTCTAACATCTTCTGTGTCAACGCAGCTTCTGTCCCCTCTATCTGTTTTAACCACTACACGAACACAGCA ..........x...........:.:.........x....:x..:..:..x...........:..:..:.:......---...x...... 76M3I10M 72/86 83.7% 89/94230402 0.0% 3/86 3.5% -76281496 -17948906 +7646 chr4 + 190214555 6048834 6048833 6048971 138 ACAGAAAT-GCCGCTGGCTTCTACCTTTTCACACAGGGCAAGCACAGTTCCAGCTTGGATTATTGCAACCTGTTCTTCATTTCTCAAATTCTAAAACACAAAAATGGGCAAGGGCATTTGACACTGGATCCCAAATCCA chr4 + 94230402 82327338 82327337 82327469 82327338 82327337 82327469 132 ACAGAAATCTTTACTGAGTTGTACCTTTTCACAGAGAGAAAGTACAGTCCCAGCTTGGATTATTGCAACCTGTTCTTCATTTCTCAAATTCTAAAATACAAAA------AAATGCATTTAA-ATTGGATTGGAAATCCA ........-x:::...:x..x............x..:.x...:.....:...............................................:......------..:x......:.-.:.....:xx....... 8M1I94M6D12M1D17M 111/131 84.7% 132/94230402 0.0% 8/131 6.1% -76278504 -17951898 +5694 chr4 + 190214555 6049811 6049810 6049913 103 ATAGTTACCCCGTTATCGCCAAGGATATCTAATTTCTTCATAAGTTCAGAAACATTCACATCCTGGAAGAGATTTCCAACGTTCATTTTTGT-------GTGAGCTACAG chr4 + 94230402 82328391 82328390 82328500 82328391 82328390 82328500 110 ATCATTACCCCATTATCTCCAAGAATATCTAGCTTCTTCATGAGTTCTGATATATTCACATCCTGAAAAAGATGTTCAATACTTATTTTTATAAAGAAGGTGAGGAACAG ..x:.......:.....x.....:.......::........:.....x..x.:............:..:....x.:...:::.:......:.-------.....xx.... 92M7I11M 81/103 78.6% 110/94230402 0.0% 7/103 6.8% -76278580 -17951822 +8396 chr4 + 190214555 6050575 6050574 6050760 186 TACCTTAACTCCTTCCTGGTGACAGAACAGCTGGAGAGCGCTGCTGTGGTTCTCGGGGAAGGTGGTGATTTGGAGGTTAAATGCTGGCGACCTCCTCTCTCTCTCCTGGGGAAAAGATTCGGTTTAAAAACAGAATGTGACCGGATTATTTACCACTTGCCATTTTCCCACGTTACTCAGCAAAAA chr4 + 94230402 82330852 82330851 82331026 82330852 82330851 82331026 175 TACCTTTATTCCTTCATGTTGACAGAACAGTTGCAGTGCGCTTCCATTGTTTTCAGGGAAGGTGGTTATATGAAGATTAAATGCTGGTGACCTTCGTTCTCTCTCCTGAGG-AAAGATTTTTTTTAAAAACAAGATGTG-------TGATTAACACAT---ATTTCCCATCTTTACCAAAGAAAAA ......x.:......x..x...........:..x..x.....x.::.x...:..:...........x..x..:..:...........:.....:.x:...........:..-.......:xx..........::.....-------.:x...x...x.---....:..xx.x....:x.:x..... 111M1D27M7D12M3D25M 136/175 77.7% 175/94230402 0.0% 11/175 6.3% -76280277 -17950125 +3065 chr4 + 190214555 6051197 6051196 6051240 44 AGGCTGACTTTCTTTCTTTTTCTTTCCTTTTTTTTTTTTTTTTG chr4 + 94230402 18234752 18234751 18234795 18234752 18234751 18234795 44 AGGCTGAATTTCCTTCTTTTTCTTTCTCTTTTTTTTTCTTGCTG .......x....:.............::.........:..x:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -12183555 -82046847 +3036 chr4 + 190214555 6052184 6052183 6052229 46 TATTTCCCTTATTAGCCAAAATTTAAAAAAATAAAATAAAAAAAAA chr4 + 94230402 66779566 66779565 66779611 66779566 66779565 66779611 46 TATCTCCATTACTCGCCAAAATTTAAAAAAGAAAAAGAAAAAAAAA ...:...x...:.x................:x....x......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -60727382 -33503020 +26233 chr4 + 190214555 6053612 6053611 6054163 552 TTTACTGCATGCAAGATCACTTAAAAAGGTGTGTTATTAATTGCAACAGTGCTTCCGTCTGGGTGTGCAGAATGCGTACCCGGTGACTACGCATGCAGGAAAGAAGTAGTTATGGAAATGAAACACAAATAAAAAAGGCAAAATATTGCAAAAACAAATTATTTTATTAAGTGCAAAACAAGCCATAGGCAATAAATATATTAGCTCTGGTACATGTCCATAGACTTGGGTGAGCACGCTCTCCAGAACACATTAAGGCAGTGAAATTATTCTGAACATACAGATTTAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAACTATAACATGTCCCCTTTACACATGCTTGAAAACATCTGAGAGCTTTACATGAATTTCAGTTTGGGTTCAAAGAGAATGTCTGCTCCGTTTGAGAGTTTACAACAGATAGAGTCTCTTACTTCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTGATCCTTGGCGTCTTGCATTTCATTCTTCAGCTGGTTCTCTTCCATTTCCAGTCTGTAAATCTAGAGCAAAGATAC chr4 + 94230402 82333447 82333446 82333973 82333447 82333446 82333973 527 TTTACCGCATGCAAGAT---GTGAGAAGGTGTGTTA---ATTGAAGCAATGC---CAACCAAGGCTGTAATATACATACCAAGTGATTTCACATGCAGGAAAGGAGTAGTTATGGAAATGATACAAATA-AAAAAAGGCAAAATATTGCAAAA-CAAAATATTTTATTAGATGTAAAACAAACTATATGCAATA--TATATTAGCTATATTACATCTTCATAAACATTAGTGAGTACTCTCTCCAAAACATATTAAGGCAGTGGTATCAATCTCATTATCCCAAGATACAACATTTAAAAAATATATACCTAAGTGA-----------TTTCCCTTAAACATGCAC-CAGACATCAGTAATCTTTACAGGAATTTCAGCTTGGGTTCAAACATAATTTCTGCTCCATTTGAGAGTTTGCAACAGAGAGAATCTCTTACTTCAAGCTCTAGCACTCTGAATTCTAACAGCTCATTCTGGTCTTTTGCATCTTGCATCTCATTCTTCAGCTGATGCTCTTCTTGTTCCATTCTGTAAATCTACAAGAAAAACAC .....:...........---x.:.:...........---....x.:..:...---.:x.:::.xx..:.:x..:.:....x:....:.x.:............:.................x...x.x.-.......................-....x..........::..:.......:.:...x......--..........x.:x.....x.:....:..x.x:.....:..x.......:....:............:x..:.x...x.x:..x.x:.xx..x..x.xxx..:...x.x.x.xxx..:x:.-----------.::..:...x......x:-x.:.....x.x:.x.......x.........:...........x.x...x........:...........:.......x...:...........:..:..........................:.....:..:..x..:........:..............:.x......:xx.....x............x.:x...:.:.. 17M3D16M3D13M3D74M1D23M1D40M2D121M11D18M1D205M 412/527 78.2% 527/94230402 0.0% 25/527 4.7% -76279835 -17950567 +5095 chr4 + 190214555 6056690 6056689 6056806 117 CACGCACCTTTTCCAGCAAGTCTTGGTTTGTTCTGATGAGCAGCTGCTTCTCTTCAACCCACTTGGAATCCTA-----AGGAAAAGTACTAAATATGGTCACA-----TTCATGGAAGCAAACAGAT chr4 + 94230402 82335188 82335187 82335313 82335188 82335187 82335313 126 CATATACCTTCTCTAGTAACTCCTGATTTGTTCTGATTAGCAACTGCTTCTCTTCTACCCATTTTGAATCCTATGAGGAAGAAAAGAATTTAA-AAGATTGCATATATTTTGTTGAAGAAGACAAAT ..:::.....:..:..:..x..:..:...........x....:............x.....:..x........-----.:......x.:.x..-.x.:.::..-----..::.x....x.:...:.. 73M5I15M1D9M5I19M 88/116 75.9% 126/94230402 0.0% 11/116 9.5% -76278498 -17951904 +3055 chr4 + 190214555 6058993 6058992 6059078 86 GTATTATTATTAGCCCCATTTTAAAGATGAGGAAACGGAGGCACAAAGAGATTATGTTACTTGCCCAAGGTTATGCAACAAGGAAG chr4 + 94230402 82283117 82283116 82283196 82283117 82283116 82283196 80 GTATTATAAT------CATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG .......x..------.....:.x.x...:......x.:.:....::x......x..x...x:..:.....:.::..::x..x:.. 10M6D70M 56/80 70.0% 80/94230402 0.0% 6/80 7.5% -76224124 -18006278 +5442 chr4 + 190214555 6060420 6060419 6060522 103 TCACCTGTCCCTTCTCAACCAGTAACTTCTCCAAATCTTCGATTTTGGCCTGACACCTCAGCAGATCAGCTTGTAGCTGCTCCCGAGTCTGGAAGGGAAAAGA chr4 + 94230402 82338326 82338325 82338427 82338326 82338325 82338427 102 TTACCTGGCCTTTCTCAATTAGAGCTTTCTCCAGGTCCTCAATTTTTGCCTGACATCGGAGAAGATCGGCTTGTAGTTGTTCACGAGTCT-GAGGAGAGAAGA .:.....x..:.......::..x:x:.......::..:..:.....x........:.xx..x.....:........:..:..x.......-..:.:..:.... 90M1D12M 77/102 75.5% 102/94230402 0.0% 1/102 1.0% -76277906 -17952496 +9377 chr4 + 190214555 6064873 6064872 6065015 143 TGCTTACATCGTCCAAGTCTTCTTCGGGCGTGGCTGGGGTCCTGTCTGTCCTGTCTGTGTTGTAGGATGTTTCGGACAACGTTTCTGAGTCCACAGACTCCTCATCAAATCCAAAAAATGTCTCCACAACATGCTTCTGTAAA chr4 + 94230402 82340832 82340831 82340974 82340832 82340831 82340974 143 TACTTACATCTTCCAAATCTTCCTCTGGTGTTGCTGGTGTCCTGTCTGTTTTATCTGTGTTATATGAAGTTACAGATGATGTTTCTGAATCTAAGGATTCTTCATCAAATCCAAAAAATGTCTCCACAACATGCCTCTGAAAA .:........x.....:.....:..x..:..x.....x...........::.:........:..x..x...x.:..::.:........:..:.x:..:..:.................................:....x... 143M 116/143 81.1% 143/94230402 0.0% 0/143 0.0% -76275959 -17954443 +3303 chr4 + 190214555 6069625 6069624 6069695 71 CGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGAAAGATTACTTGAGCCTGGGAGGTTGGGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.x......:...........::........x:xx:x::.x:......:..::.:..x..x......:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -69963582 -24266820 +6640 chr4 + 190214555 6070047 6070046 6070162 116 AGCTGCCTACCTTCATGCTTATAGGTCATCTCCTGGCAGCCAGAGAAGTACAGGCACACCAGGGCACAGAGACACAGGAAGAAAGAGAAGTACAGCACAAAGAGGACATATTCCAT chr4 + 94230402 82342210 82342209 82342325 82342210 82342209 82342325 116 AACTTCTTACCTTCATGCTTATATGTCATTTCTTGGCAGCCAGAAAAATACAGGCACACCAAAGCACAGAGACAGATAAAAAAAGAAAAATATAAAGCAAGAAATATGAACGCCAT .:..x.:................x.....:..:...........:..:.............::...........x.x:..:.....:..:..:.:x:...::.:x.::x.:x.... 116M 87/116 75.0% 116/94230402 0.0% 0/116 0.0% -76272163 -17958239 +3114 chr4 + 190214555 6079795 6079794 6079833 39 AAAAACCAACCAACCAACCAACCAAACAAACAAAAAGCC chr4 + 94230402 57454529 57454528 57454567 57454529 57454528 57454567 39 AAAAATCAACCAACCAACCAAACAAACAAACAAAAACCC .....:...............x..............x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -51374734 -42855668 +9161 chr4 + 190214555 6081604 6081603 6081785 182 CTCACCATTTCCACGTTTTCCCGCGTGAGGTTCTTGATTTTCTCCTCCATCCTCTGGATACTCTGCAACAGATCCTCATTCTTCTTGTTCATCCGCTTGTTCTTCTCCACCAGGGGCTTCAGCTGAACCTCGGTCTCTCGTGAGCGTTTCAGCTGTGGTTGGAAACAGACACAGAGGCTCAG chr4 + 94230402 82350272 82350271 82350450 82350272 82350271 82350450 179 CTTACCAATTCTACATTTTCCCTTGATAGATTTTTTATTTTTTCTTCCATTCTCTGGATGCACTGCATCATATCATCATTTTTTTTGCTCATCCTCTTATTTTTTTCAACCAAAGGCTTTAGCTGACTTTCTGTCTCCCGAGAACGTTTCAGCTGCAAATGGCAAAGGA---AGAAGCTAAG ..:....x...:..:.......x:.xx..:..:..x.....:..:.....:........:.x.....x..x...x.....:..:...:......x...:..:..:..x....::.....:......x::..x.....:..x..:...........:::x...x..x:..---...:...x.. 169M3D10M 133/179 74.3% 179/94230402 0.0% 3/179 1.7% -76268668 -17961734 +3322 chr4 + 190214555 6083274 6083273 6083345 72 GTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.:.........::........x.xx.x...x...........:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -69949932 -24280470 +9213 chr4 + 190214555 6084840 6084839 6085011 172 ACTTACCAGTTCATTCCTCTCATCTGCCAACAGCGTATTTCTGTCTTCCAGCTTCCGTATCACTGAATTCAGTTCAGCAATTTTTAGTTGAAATCGCCTCACATCTCGCTCGTCCATATGTTGATCCT-------AAAAAAAAAAAAAAAAAAAAAA--------AAAAAGTCAAGACGTAAATGTA chr4 + 94230402 82352458 82352457 82352644 82352458 82352457 82352644 187 ATTTACCAGTTCATTTCTTTCATCTGCTAAGAGAGTATTTCTGTCTTCCAGCTTCCTTATCATAGCATTCAGTTCAGCGATTTTCAACTGAAATCTCCTCACATCTCGTTCATCCAAATGCTGCTCCTTTGCATCAAAGACATATAGATATATAAAATTATCTTTAAAAATACAATCCATAAATGTA .:.............:..:........:..x..x......................x.....:x.x............:.....:.::.......x............:..:....x...:..x....-------...:.x.x.x.:.x.x.x....--------.....xx...xx.:........ 128M7I22M8I22M 139/172 80.8% 187/94230402 0.0% 15/172 8.7% -76267618 -17962784 +13046 chr4 + 190214555 6085415 6085414 6085643 229 CTCACCTGGACGCCCATGAGCTCCACCATGTCCCCGATCCCGGGCGGGAGCTCTCTCTTTGGACTACTGTGGTGCCGCTCGGCCTCCTTGACCTGAACCAGCTGCTCATCCAAAGCCTCTTTCTGCAGAAGCAGCTTCTGGGTCTGCCCAGCCTGCACGCCAAGTTCCTTCTCCAAGGCCAGAATCACACGGTCTTTCCCTTTGATCTCATCCATCTGAAAAGGAGAAA chr4 + 94230402 82353291 82353290 82353519 82353291 82353290 82353519 229 CTTACCGGGCTTCCCATCAACTCAGTGATGTCCCCCACTCCCGCAGGAAGTTCTCTCTTGGGGCTGCTGTGGTACCGCTCTGCCTCCTTCACTTGGACGAGCTGCTCATCCAAAGCTTCTTTCTGAAGGAGGAGTTTCTGTGTATGTCCTGCCTGGATGCCAAGGTCTTTCTCCAGAGCCAGAATCACTCTATCTTTGCCTTTTATCTCATCCATCTGGAAAGAAATAA ..:...x..x:x.....x.:...x::x........x.::..x.xx..:..:........x..:..:.......:......x........x..:..:..x.................:........x..:..x..:.....x..x..:..x.....x.:......x..:.......::...........x.x:.....x.....x..............:....:.:x.. 229M 177/229 77.3% 229/94230402 0.0% 0/229 0.0% -76267876 -17962526 +3163 chr4 + 190214555 6095111 6095110 6095171 61 AAGGGAAAGAAAAGAAAGAGGGAAATGAAAGAAAAAGAAAGGAGCAAAGGAAGGAAGAAGG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ..::.:..:....:.::.:...:.....:.....:...:..:.:......::x.::...:. 61M 41/61 67.2% 61/94230402 0.0% 0/61 0.0% -56380603 -37849799 +4367 chr4 + 190214555 6095182 6095181 6095378 197 AAGAAGAAAGGAAGGGAGG--AGGGAAATAGAAGAAAGAAGGAAAGAAAAGAAAG-GAAAGGAGCGAAGGAAAAAGGGAAGGAAAGGAAGAAAGGAAGGAAGGGAGGGAGGGAGGGAGAGAGGGAAGAAAGGAAGGGGAAAGAGAGAGACAGCGAAAGAAAGAAAGGAAGGGAGGAAGAAAGGAAAGAAAGAAGAAAGGA chr4 + 94230402 2498459 2498458 2498653 2498459 2498458 2498653 195 AAGCAGTGAGTGAGGGGGGTGAGGCGGGTGCGGGGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGAT-----AAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGA ...x..x:..x:....:..--...x:::.:x::.:.x.:.x.x.xx..:...x:.-...:...:.:.x..::.:x..x:.x.:x..x...x:x:.:..:x:.....x:.x::.x.xx....x-----..:...:.:.:..x.::.....:xx.x....::............:.:.:.....x....x.::......x.. 19M2I34M1I66M5D73M 116/192 60.4% 195/94230402 0.0% 8/192 4.2% 3596723 NA +7238 chr4 + 190214555 6098493 6098492 6098793 301 AAAGAAAAGAAAGGAAAGGAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAAAGAAAAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGA--AAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG---AAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAAGAAAGAAAGAAAGAAAGATTGAT chr4 + 94230402 31955211 31955210 31955508 31955211 31955210 31955508 298 AAGGAAGAGAAAGGGAAACAATCAGGCATGCAGGACAGaaagcaa---actgaataggacagaaagataaagaaaaaagactgaaagatacagagagaaaatcagaga---gaagaaatggaacaccaaaagaagatggaggaaaaccagtattaaaaaaacagctgagcattaaatggaaaaagaaggaaaaggaaagaaaGACGTAAGGAAAGACATCCTAGCTATAGATAGCAAAA---AGAGTGAGACACAAGACAATAAGAAAGAAAAGACAAAGAGGAGAGAGAAAACAAGGGAGATTAAT ..:...:.......:..:x..xx.:.x.x.x.:..x...:..x:.---.xx...x.:..x.......-..::..:.....xx......x.x.::..:.::.xx.:...---.......x.:..x.--.......:.x.:.:....:xx.:x.xx:...::.x..xx:..x.xx...x:..:.:.:.:::.:..:..........x:x..:......x.x---.:xx.x...x..x....---...:x....x:x...:x.:x...:..::.....x.....::...:.....:x...::.....:.. 45M3D19M1I40M3D14M2I92M3I17M3D65M 189/292 64.7% 298/94230402 0.0% 15/292 5.1% -25856718 -68373684 +3242 chr4 + 190214555 6098521 6098520 6098641 121 AGAAAGAGAGAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGA---AAAAGAAAGAAAGAAAAGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .......:::..xx.x.....:...:.:.........x.:.::xxx.:.:xx::..x.:..x.x...::.x:...:.:...::.:......:.:.:.x.:x.---x:...x.x...:...::.. 102M3I19M 73/121 60.3% 124/94230402 0.0% 3/121 2.5% -45049858 -49180544 +3448 chr4 + 190214555 6098529 6098528 6098772 244 AGAGAG-AGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---------AGAAAGAAAGAA-AGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGG-------AAGGAAAGAAAGAGAAAGAAAAGA chr4 + 94230402 1317354 1317353 1317598 1317354 1317353 1317598 245 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGA-----GAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAG---------AAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAG---GGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAA ......-......:x.x.x..:xx...:.x.:.-----......xxxx..:.x..x..:.x.:..xx.:..:...---------..:.....:....:.....::..:x.:xx...:x:..:.:x.....x..:xx.:...:...---.:....:...:x:x...x::...::..---------......:...::-..xx.xx::..x::.:..:....:xx.....::.-------x..x...:x..x:.::....:.:. 6M1I26M5D37M9D61M3D27M9I12M1I34M7I24M 141/227 62.1% 245/94230402 0.0% 35/227 15.4% 4781175 NA +3972 chr4 + 190214555 6098541 6098540 6098706 166 AAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAA--AGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 49044652 49044651 49044820 49044652 49044651 49044820 169 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAA-GAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA ...::.xx.:.:.....::..x..:::.xx.::.:x:.xx....:..x.:.x..x:....--.xx...x:.::..:.:..:..xx..........-....:.x:.:...x.....:....:.....x..::x.....:--:.::xx..:....::....:x:..x..x.. 60M2I33M1D42M2I30M 102/165 61.8% 169/94230402 0.0% 5/165 3.0% -42946111 -51284291 +3433 chr4 + 190214555 6098561 6098560 6098658 98 AGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAA----------GAAAGAAAAGAAAGAAAGGAAAGGAAAG chr4 + 94230402 24042744 24042743 24042851 24042744 24042743 24042851 108 AGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAAG ..x.:..:x......:x:....x..x...:...:....:x..:..:x..:....:.:.:.x...x.....----------:x.x::...x...x.........x.... 70M10I28M 68/98 69.4% 108/94230402 0.0% 10/98 10.2% -17944183 -76286219 +3598 chr4 + 190214555 6098568 6098567 6098652 85 AAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAG-AAAAGAAAGAAAGGAAA chr4 + 94230402 58935729 58935728 58935814 58935729 58935728 58935814 86 AAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ......:x.:x:.xx.......::x::.:..:......:.x.......x...:...:......x..x.-..::....:.:...... 68M1I17M 60/85 70.6% 86/94230402 0.0% 1/85 1.2% -52837161 -41393241 +3364 chr4 + 190214555 6098589 6098588 6098659 71 AGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAA-------AAGAAAGAAAGGAAAGGAAAGG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAA--TAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG .......:..:.......x......--x...x...x..:.:....x...-------.x........:.....:..... 25M2D22M7I22M 57/69 82.6% 76/94230402 0.0% 9/69 13.0% -65502437 -28727965 +3199 chr4 + 190214555 6098612 6098611 6098667 56 AAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGA chr4 + 94230402 40414740 40414739 40414795 40414740 40414739 40414795 56 AAATTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAAAA ...xx...:......:....:::.::::...........::...:.........:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -34316128 -59914274 +3127 chr4 + 190214555 6098671 6098670 6098747 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x.......:.::..x.x......x:.....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -35013507 -59216895 +3053 chr4 + 190214555 6098677 6098676 6098732 56 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 83419839 83419838 83419894 83419839 83419838 83419894 56 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAA ........x...:.:x..x::....:x....x...x..:.............:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -77321162 -16909240 +3114 chr4 + 190214555 6098691 6098690 6098777 87 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...x..:..:x.:...xx.x...x............:........:..::.x:.:.xx.::.....x..:.x.x.::::.x..x... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% -69142816 -25087586 +3151 chr4 + 190214555 6098692 6098691 6098772 81 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAAGA chr4 + 94230402 65503041 65503040 65503121 65503041 65503040 65503121 81 GGAGGAGAAAAAGGAAGAAAAAGATAAAGTGGATGGGGGAAGAACAAGCATGGGAAAAAGGCAAGAAGGGGCAAGGGGAGA .:.:..:.:....:......:.:.x....x::.x.:::...::.x...x.x..:.::....x.....:.:.x...:::... 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% -59404349 -34826053 +22039 chr4 + 190214555 6105467 6105466 6105974 508 ACGTACCAGCCTGCGGATGTCGCGCTCGCACTCGCGCTTGATGCGGTGCACCTCGTCTTGGTGCGCCTGGTAGGCGGCACGCAGGTCGGCTGCCTTGGTCTTGTCAGCCTGCATGCAGTTACTGAGCGCCTCCTCTGCCTGCTTGCGCGCTGCCTTGAGCTCCAGGATCTCCTGCTGCAGCCGCAGGCGCTCTCCATCGAAGGCCCTGCGCGCCTCCTCGCGCGCCTCGGTCAGCAGCGCCGTCTTGACCTTGTCGGCCGCGCCGTCGCGCAGCACGTTCAGCGTGGCCTGCAGCCGCTGCAGCTCGCCCTCCTTGATCTTGGCGGTGCGCGCCGCCTCCTGCTCGTGCTGCCGGATGAGCCCCTCGCGCAGCGCCTGCAGCTCCTTGGTCTTCTCCTCATGCAGCTTGGCCTTGAGCTCCGAAATGTAGGCCGTGTGCCGTCGCTGCTCCTGCTCGCGCTCCAGCTTCGCCTCCTGCAGCCGCTCGCGCAGTTTGCCCACCTGCAGC chr4 + 94230402 82365286 82365285 82365793 82365286 82365285 82365793 508 ACTTACCAGCCTGCGGATATCCCTCTCACATTCACGCTTTATTCTATTAATCTCATCCTGATGGGATTGGTAAGCCATGCGCAGGTCAGCAGCCTTCATTTTATCCGCCTGCATGATGTTGTTCAAAGCTTCTTCAAGCTGCTTTTTACCAGATTTTAGCTCCAAGATCTCCTGTTGCAACTTCATTCGTTCGCTGTCAAACGCTTTGCGAGCCTCCTCCTTCGCCTCACTCACCAGCGTGGTCTTCACCTTGTCGGCTGCCCCGTCCCGCAGCACATTGACTGTTGACTGCAAACGCTGGATTTCACTGTCTTTAATTTTCACCATTCTTGCTACTTCCTGCTCATGCTGTCGGATCAGCAGCTCTCTGACACTCTGAAGCTCCTTCATTTTCTCCTCGTGGAGCTTAGCTTTCAGTTCTGAAACATAGGCCGTGTGCTTGTGCTGCTCTTGCTCCCTTTCTTGCTTAACCTCTTGGATTTTCTCTCTCAATTTACCCACCTGGAAC ..x...............:..x.x...:..:..:.....x..x.x:.xx.:...:..:..:..x.x:.....:..x:::........:..x.....x:.:..:..x.........xx...::.x.:x..:..:..x:x......x:xxx.x.x:..x.......:.........:....:.:x..xx..:..x.::..:..x..::....x........x:x......:x...x.....:x.....x...........:..x.....x........:..x.x:..x.x.....:x.....x.x:..:.:x..:..:..:..x:.x:.x.x:..::.:........:.....:.....x...xx...x.xx.xxx:...x........x:.:........:..x.....:..:..x..:..:....::............:xx:.......:.....x.x:..:x....x:....:..x.x::x...x.x..:...:........x.:. 508M 351/508 69.1% 508/94230402 0.0% 0/508 0.0% -76259819 -17970583 +7781 chr4 + 190214555 6112708 6112707 6112861 154 ACGCCAACCCCCACCTTGCTTTTTTCCTGCTGGAACTCGATCTGAATGCTGGTCAGCTTGGCCCGCAGCTCCTCGTTGGCCATCTGCACCGCGTCCGTCTCCATCTCGGGCTTCTCGCCCTTGCTCCGGCCTTTCTTCGACATGCTTCCCCTTG chr4 + 94230402 82373057 82373056 82373210 82373057 82373056 82373210 154 ATGCAAATGCATACCTTGCTTTTTTCTTGCTGAAATTCTATCTGAATATTGGTTAGTTTAGTTCGTAGCTCCTCATTAGCAGCTTGCAGAGCTTCAATATCCATGTCGGGCTTATCTCCCTTGGTACGACCTTTCTTTGACATAATTATTTTTG .:..x..:x.x:..............:.....:..:..x........::....:..:..:.::..:........:..:..x:::....xx..x..x:.x.....x........x..x......x.x..:........:.....:x..x:::... 154M 111/154 72.1% 154/94230402 0.0% 0/154 0.0% -76260349 -17970053 +3605 chr4 + 190214555 6119404 6119403 6119486 83 CGTGGTTGCGCATGGCTGTAATCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..x.:...:.--....:.:...........::..........xx.x...x.:.........:.:..x.xx:..:..::. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -69913793 -24316609 +3398 chr4 + 190214555 6119539 6119538 6119583 45 CGTCTCAAAAACAAACAAACAACAACAACAACAAAAAAAAACCAC chr4 + 94230402 24125109 24125108 24125153 24125109 24125108 24125153 45 CATTTGGAAAACAAACAAACAACAACAACAACAAAAAAAAAACAC .:.:.x:..................................x... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -18005570 -76224832 +3280 chr4 + 190214555 6119543 6119542 6119585 43 TCAAAAACAAACAAACAACAACAACAACAAAAAAA-------AACCACTC chr4 + 94230402 22215897 22215896 22215946 22215897 22215896 22215946 50 TTAAAAACAAACAAACAACAACAACAACAAAAAAACAGTAAGAACCACTC .:.................................-------........ 35M7I8M 42/43 97.7% 50/94230402 0.0% 7/43 16.3% -16096354 -78134048 +3135 chr4 + 190214555 6119544 6119543 6119578 35 CAAAAACAAACAAACAACAACAACAACAAAAAAAA chr4 + 94230402 39912623 39912622 39912657 39912623 39912622 39912657 35 CAAAAACAAACAAACAACAACAACAACAAAAAAGA .................................:. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -33793079 -60437323 +3656 chr4 + 190214555 6139627 6139626 6139708 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCCTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::........x.xx.x...x.:.:.........:..x:xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -69893574 -24336828 +3251 chr4 + 190214555 6141305 6141304 6141365 61 GCGCATCTGTAATCCCAGCTACTTGACAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:...:x....:.:............x........x.xx.x...x::.........:.x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -69891899 -24338503 +3070 chr4 + 190214555 6152067 6152066 6152143 77 AGGAAGGGAGGGAAGAAGAAAGAGACAGGGGAAGGAAGAAGGGAGAGAGGAAGGAAGAGAGGGAGGGTGGGAAAAGA chr4 + 94230402 86438911 86438910 86438985 86438911 86438910 86438985 75 AGGGTGGGAGAGAG--AGAAAGTAATGGGAAAAGATGGAACGAAACGAGACAGGAGGGGAGAGATGGTGGGGAAAGA ...:x.....:..:--......x:.::..::...:x:...x.:.:x...:x....:.:...:..x......:..... 14M2D61M 51/75 68.0% 75/94230402 0.0% 2/75 2.7% -80286844 -13943558 +3104 chr4 + 190214555 6173945 6173944 6174011 67 TGTGATCCCAGCTACTTGGGAGGCTGAGACAGGACAATCGCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.:...........::........x.xx.xx..x.:........::....x.xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -69859266 -24371136 +3779 chr4 + 190214555 6182273 6182272 6182357 85 GTGGTGCATATTTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCGGGAGCTCAAAGCTGCAATGAACA chr4 + 94230402 76033201 76033200 76033281 76033201 76033200 76033281 81 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA--GAACA ........::.--.....:...........::........x:xx.x.:.x.......:...:.:....:x::....:.--..... 11M2D65M2D5M 61/81 75.3% 81/94230402 0.0% 4/81 4.9% -69850928 -24379474 +3081 chr4 + 190214555 6182392 6182391 6182462 71 GAGCGAGACCCTGTCTCAGAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAAAAGG chr4 + 94230402 16379592 16379591 16379662 16379592 16379591 16379662 71 GAGAAGAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAG ...x:::...:....:.x:.....x:.....x...:x.:.......:..:.:.x...::.....x.x..:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -10197200 -84033202 +3070 chr4 + 190214555 6182408 6182407 6182449 42 CAGAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGA chr4 + 94230402 21345708 21345707 21345749 21345708 21345707 21345749 42 CAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGACAAGA ............:......:........:....::..x.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -15163300 -79067102 +3003 chr4 + 190214555 6211687 6211686 6211739 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -17036035 -77194367 +3148 chr4 + 190214555 6211697 6211696 6211753 57 ATATATATATATATATATATATATACACACACACACACACACACACATTATGTATAT chr4 + 94230402 50629533 50629532 50629589 50629533 50629532 50629589 57 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACATGGTGTTTAT .......:x......x....:..........:::.x.:.....x....x:...x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -44417836 -49812566 +3064 chr4 + 190214555 6211702 6211701 6211745 44 TATATATATATATATATATACACACACACACACACACACACATT chr4 + 94230402 4409082 4409081 4409125 4409082 4409081 4409125 44 TGTACATATATATATATATACACACACAGAGACACACACATTTT .:..:.......................x.x.........:x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 1802620 NA +3096 chr4 + 190214555 6211704 6211703 6211745 42 TATATATATATATATATACACACACACACACACACACACATT chr4 + 94230402 4409082 4409081 4409123 4409082 4409081 4409123 42 TGTACATATATATATATATACACACACAGAGACACACACATT .:..:.............:.........x.x........... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 1802622 NA +3908 chr4 + 190214555 6214296 6214295 6214373 78 GTGGTGCATGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCTGGAGGATCACTTGTGCCCAGGAGTTCAAGGCTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ........:.--......:........:..::........x.:x.x.:.x......x:.....:..:.:x:.....:. 10M2D66M 57/76 75.0% 76/94230402 0.0% 2/76 2.6% -69818905 -24411497 +3718 chr4 + 190214555 6223290 6223289 6223363 74 GTGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGAGAGGATCGCTTGAACCTGGAAGATTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:.:.........::........x:xx.x.:.x.:........::....x..x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -69809914 -24420488 +4389 chr4 + 190214555 6287087 6287086 6287179 93 TTAAAGGGCCTACAAAGGGAGACATGGAAATCCCCTTTGAAGAAGTCCTGGAGAGGGCCAAGGCCGGGGACCCCAAGGCACAGACTGAGGTGA chr4 + 94230402 82476682 82476681 82476774 82476682 82476681 82476774 93 TTGTAGAGACCATGAAGGAGGAACCTGAAGTGCTCTTTGAGGAACTGCTGGAGAGGGCCAAAGCTGGAGAACCAAAAGCACAAACAGAGGTAA ..:x..:.x.:.::....::..xx:x...:.x.:......:...x.x..............:..:..:..x..x..:.....:..x.....:. 93M 65/93 69.9% 93/94230402 0.0% 0/93 0.0% -76189595 -18040807 +4044 chr4 + 190214555 6288076 6288075 6288159 84 ACATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAAAATCACTTGAACCCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::........:.--....:.:...........::........x.xx.x:..x.............:.:x.xx:..:..:.. 15M2D67M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% -69745120 -24485282 +8876 chr4 + 190214555 6291184 6291183 6291369 186 TCCTATCCCTCAGGCATCACGTCCGAGAACGAACGGGAGGTGAGGCAGCTCTCCTCCGAGACCGACCTGGAGAGGGCCGTGCGCAAGGCAGCCCTGGTCATGTACTGGAAGCTCAACCCCAAGAAGAAGAAGCAGGTGGCCGTGGCGGAGCTGCTGGAGAATGTCGGCCAGGTCAACGAGCACGGT chr4 + 94230402 82482159 82482158 82482344 82482159 82482158 82482344 186 TTCTTTTCTTGAGGCATCACTTCTGAGAATGAGCAAGAAGTTAAAAAACTATCATCTGAGACTGACTTGGAGAGAGCTGTGAGAAAAGCTGCCTTAGTCATGTATTGGAAATTAAACCCAAAAAAGAAGAAGCAATTAGCAGTTTCTGAACTACTGGAAAATGTTGGGCAAGTTGATAATGAAGGT .:..x.:.:.x.........x..:.....:..:.::..:..x.::x.:..x..x..:.....:...:.......:..:...x.x..:..x...:.:........:.....::.x.....x..:...........:x.:..x..xx.x..:..:.....:.....:..x..:..::.::.xx.x... 186M 130/186 69.9% 186/94230402 0.0% 0/186 0.0% -76190975 -18039427 +5251 chr4 + 190214555 6291914 6291913 6292021 108 CAGATGGAGGGGCGCAGCCAGGCCCCGTGCCCAAGTCCCTGCAGAAGCAGAGGCGCATGCTGGAGCGCCTGGTCAGCAGCGAGTGTGAGTGCAGCCCCTGCCCCGTCT chr4 + 94230402 82482674 82482673 82482779 82482674 82482673 82482779 106 CAGATGGTGAGAAGCAACCTGGTCCAGTCCCAAAGTCAGTGCAGAAGCAGAGGAGAATGCTGGAGCGCTTAGTGAGCTGTGAATGTGAGTAC--CTACTGCTTCTTCT .......x.:.:x...:..x..:..x..x..x.....xx..............x.x............:.:..x...x.:..:.......:.--.:x....::.x... 92M2D14M 80/106 75.5% 106/94230402 0.0% 2/106 1.9% -76190760 -18039642 +8232 chr4 + 190214555 6295017 6295016 6295194 178 ATGCTGTTTTCTC-----TCATGCTTCAGCCAAGAACTACATCGCGCTGGATGACTTTGTGGAGATCACTAAGAAGTACGCCAAGGGCGTCATCCCCAGCAGCCTGTTCCTGCAGGACGACGAAGATGATGACGAGCTGGCGGGGAAGAGCCCTGAGGACCTGCCACTGCGTCTGAAGGTGAG chr4 + 94230402 82486075 82486074 82486254 82486075 82486074 82486254 180 ATGCTATTTACTCATAATCTATCTTACAGCTAAAAAATTTATTGCTTTGGATGACTTCGTGGAGATTACCAAGAAGTATGCAAAGGGAATCATCCCATCTAACCTGATTATGCAGGAAGAGGAAGATGAT---GAATTGGCAGGGAAGACTCCTGAAGAGTTGCCCATGAGACTGAAGGTGAG .....:...x...-----::..x:.x....:..:..x.x:..:..x:..........:........:..:........:..x.....x:.......xxx:.:....x.:x.......x..x.........---..::....:.......x:.....:..x:....xx..x.x........... 13M5I112M3D50M 131/175 74.9% 180/94230402 0.0% 8/175 4.6% -76191058 -18039344 +89930 chr4 + 190214555 6300645 6300644 6302471 1827 TCTTTCCC---CCAGGTGGTCAAGTACCCCCTGCACGCCATCATGGAGATCAAGGAGTACCTGATTGACATGGCCTCCAGGGCAGGCATGCACTGGCTGTCCACCATCATCCCCACGCACCACATCAACGCGCTCATCTTCTTCTTCATCGTCAGCAACCTCACCATCGACTTCTTCGCCTTCTTCATCCCGCTGGTCATCTTCTACCTGTCCTTCATCTCCATGGTGATCTGCACCCTCAAGGTGTTCCAGGACAGCAAGGCCTGGGAGAACTTCCGCACCCTCACCGACCTGCTGCTGCGCTTCGAGCCCAACCTGGATGTGGAGCAGGCCGAGGTCAACTTCGGCTGGAACCACCTGGAGCCCTATGCCCATTTCCTGCTCTCTGTCTTCTTCGTCATCTTCTCCTTCCCCATCGCCAGCAAGGACTGCATCCCCTGCTCGGAGCTGGCTGTCATCACCGGCTTCTTTACCGTGACCAGCTACCTGAGCCTGAGCACCCATGCAGAGCCCTACACGCGCAGGGCCCTGGCCACCGAGGTCACCGCCGGCCTGCTATCGCTGCTGCCCTCCATGCCCTTGAATTGGCCCTACCTGAAGGTCCTTGGCCAGACCTTCATCACCGTGCCTGTCGGCCACCTGGTCGTCCTCAACGTCAGCGTCCCGTGCCTGCTCTATGTCTACCTGCTCTATCTCTTCTTCCGCATGGCACAGCTGAGGAATTTCAAGGGCACCTACTGCTACCTTGTGCCCTACCTGGTGTGCTTCATGTGGTGTGAGCTCTCCGTGGTCATCCTGCTGGAGTCCACCGGCCTGGGGCTGCTCCGCGCCTCCATCGGCTACTTCCTCTTCCTCTTTGCCCTCCCCATCCTGGTGGCCGGCCTGGCCCTGGTGGGCGTGCTGCAGTTCGCCCGGTGGTTCACGTCTCTGGAGCTCACCAAGATCGCAGTCACCGTGGCGGTCTGTAGTGTGCCCCTGCTGTTGCGCTGGTGGACCAAGGCCAGCTTCTCTGTGGTGGGGATGGTGAAGTCCCTGACGCGGAGCTCCATGGTCAAGCTCATCCTGGTGTGGCTCACGGCCATCGTGCTGTTCTGCTGGTTCTATGTGTACCGCTCAGAGGGCATGAAGGTCTACAACTCCACACTGACCTGGCAGCAGTATGGTGCGCTGTGCGGGCCACGCGCCTGGAAGGAGACCAACATGGCGCGCACCCAGATCCTCTGCAGCCACCTGGAGGGCCACAGGGTCACGTGGACCGGCCGCTTCAAGTACGTCCGCGTGACTGACATCGACAACAGCGCCGAGTCTGCCATCAACATGCTCCCGTTCTTCATCGGCGACTGGATGCGCTGCCTCTACGGCGAGGCCTACCCTGCCTGCAGCCCTGGCAACACCTCCACGGCCGAGGAGGAGCTCTGTCGCCTTAAGCTGCTGGCCAAGCACCCCTGCCACATCAAGAAGTTCGACCGCTACAAGTTTGAGATTACCGTGGGCATGCCATTCAGCAGCGGCGCTGACGGCTCGCGCAGCCGCGAGGAGGACGACGTCACCAAGGACATCGTGCTGCGGGCCAGCAGCGAGTTCAAGAGCGTGCTGCTCAGCCTGCGCCAGGGCAGCCTCATCGAGTTCAGCACCATCCTGGAGGGCCGCCTGGGCAGCAAGTGGCCTGTCTTCGAGCTCAAGGCCATCAGCTGCCTCAACTGCATGGCCCAGCTCTCACCCACCAGGCGGCACGTGAAGATCGAGCACGACTGGCGCAGCACCGTGCATGGCGCCGTGAAGTTCGCCTTCGACTTCTTTTTCTTCCCATTCCTGTCGGCGGCCTGAGGA chr4 + 94230402 82487796 82487795 82489622 82487796 82487795 82489622 1827 TTTTTCTCTTTCCAGGTTATAAAATATCCACTTCATGCCATAATGGAAATTAAAGAATATCTTATAGATATTGCATCAAAGGCAGGAATGCATTGGCTGTCTACCATTATTCCAACACATCACATCAATGCTCTCATCTTCTTCTTCATCATCAGTAATCTGACAATTGATTTTTTTGCCTTCATTATTCCGTTAGTTATATTCTATTTGTCCTTCATTTCTATGGTGATTTGTACACTGAAAGTTTTTCAGGACAGTAAGGCCTGGGAAAACTTCCGCACTTTGACTGACTTACTCCTTCGTTTTGAACCAAACCTAGATGTTGAGCAAGCTGAGGTGAACTTTGGGTGGAATCACTTAGAGCCATACATTTATTTTTTACTCTCAGTGTTCTTTGTAATTTTTTCCTTCCCTATAGCAAGCAAGGACTGTATACCATGCTCAGAGTTAGCTGTTGTCTCAGTTTTCTTCACAGTGACAAGCTACATGAGTTTAAGCACATGTGCAGAACCGTACACGCGAAGAGCATTAATGACTGAGATAGCAGCAGGTTGCTTATCCCTGTTGCAGATATTACCTGGGAATTTTGGCTTCTTGAAATTCTTAGGTAAAACCTACTTTACTATTCCTGTAGGCCATCTTTTGGTGATCAATGTAAGCATCCCGTGCCTTTTGTTTTTGTATTTGTTCTATCTTTTCTTCAGAATGGCACAACTGCGAAATTTTAAAGGCACCTACTGTTACCTGGTCCCATATCTGGTCTGCTTTATGTGGTGTGAACTCTCTGTGGTCATTCTGCGGGAGTCCTCTGGCATTGGGCTCGTCCGTGCATCAATTGGTTACTTTCTCTTTCTCTTTGCACTCCCAGTGCTGGGTGTAGGCATTGCACTGATGTGTCTGGTCCATTTCATTAAGTGGTTCGTGTCTCTGGAGCTCGTGAAAATTGTAGTGACTCTAGTTTTGTGTGCTGTTCCTTTGCTCTTCCGATGGTGGACAAAAGTCAACTTCTCTGTAGTAGAAATGGTTAAATCCCTCACTCGAAGCTCAATTGTGAAACTCATTTTGGTGTGGATTACAGCTGTAGTGTTGTTCTGTTGGTTCTATGTGTATCGATCAGAGGGAATGAAAGTTTACAACTCCACCTTGACATGGAATCAGTATGCCTTCCTCTGTGGACCCCGATCGTGGAAGGAGACCAATATGGCACGTACTCAGATTTTATGTAGTCACCTGGAAGGACACAGAGTGACGTGGACTGGGCGGTTCAAATACGTGCGTGTTACAGAAATTGACAATAGTGCAGAATCTGCAATAAATATGCTTCCACTTTTTATTGGTGATTGGATGAGGTGCTTGTATGGTGAAACCTACCCTCTTTGTGACCCCAAAAATGTCACTATGGAGGAGGAAGAATTGTGTCGTCTCAAGTATCTGACAAAGCATAACTGCCACATGAAAATGTTCGATCGGTACAAATTTGAAATAACTGTGGGTATGCCTTTCAGTAGCAAAAATG--GAACCAAGTTGGTG-GAGGAAGATGACATAACCAAAGATATTGTGCTGAAGGCAAGCAATGAGTTTAAGAAAGTGTTGTTGAACTTGAGGCAAGGAAGTATAATTGAATTCAGCACAATTCTGGAAGGTCGTCTTGGCAGTAAATGGCCTGTCTTTGAACTGAAAGCAATCACTTGCTTGAATTGCATGTCTAAACTCCTACCTGCAGGGAGGCATGTGAAAATAGAGCATGACTGGAGGAGCACAGTGCATAAAGCCATTAAATTTGTTTTTGATTTTTTCTTCTTCCCATTCCTGTCAGCTGCATAATGA .:....:.---......x:.x..:..:..x..x..:.....x.....:..:..:..:..:..x..x..:..x..x..x.:......x.....:........:.....:..:..x..:..:........:..x..................:....:..:..x..x..:..:..:..:......x.:..:...:.:..:..x.....::..........:..:........:..:..x..x..:..x..:........:...........:...........::.x..:...:.:..x..x..:..:..:..x.....:.....x.....:..:.....x.....:..x.....:...:.:.....x..:::::....::.:.....x..x.....:..x..:..:........:..x..x...........:..x..x.....:...:.:.....::..x.x.x:.....:..x.....x......x....::.:.....x::......:..x........x..:..x:.:::x..:...:.x:.x..x..::xx:....x...:...xxx:xx.:..:xx.....xxxx..x.:....:x..:.x..:x.:....x.x.:..::.x.....x.....:..xx.x..xx....:..x...:..........x:.x.x.x.x..::..:.......:......x.x........:...x.:.....:..:...........:.....x..x..x..:.....x.....:...........:.....:........:....x.......x.:...x.x.....xx....:..x..x..:..:.....:.....:........x.....x:.x....xx.:x...x.x..x...:..x.:x..x.x..x...:::x:.......::.............::x..:..:.:...x..:x.:.:xx.x...:x...x..::....x..x..x........x..:.:..:.........:..:.::.....x..:.....x..x..:.....x..x..x..:.....::........x.:..:..::.x...:.......:..............:..x........x.....:..:...........x:....x...x.x.......x:x:x..x..:..:..x..xx.x..............:.....:..:..:.....::.x..:..:........:..x.....:..x........:..x..x.....:.....x..:..x..x..x..:.....:..:..x..:.....x..x..:.....:..::.:..:..:..:..:......x.x...:.x..:..:..::........x::..:::...:::x..:::.x.:.:..xx.....:..::.x.....:..:...:xx...:.x.....:xx.........x..:.x......:..x.....:.....:..x..:.....:.....x.....:...::x:x..--.:x:.:x.:x.x:.-.....:..:...:.x.....:..:..:......x:...x....::.....:....:x...:..:.x.:.:..x.x..:..x..:x.x..:..:........x..:.....:..:..:..x.....:..:...........:..:..x..:..x....x:...:.x..:......x.:x.:...::...::.x:..x....:.....:..x.....:......x.x.....x......::x...:.x..:..:.::..:..:..:..:.................:..x..x.:.x.. 8M3I1505M2D14M1D297M 1314/1824 72.0% 1827/94230402 0.0% 6/1824 0.3% -76187151 -18043251 +3545 chr4 + 190214555 6314931 6314930 6315002 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x....::........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -69718275 -24512127 +21315 chr4 + 190214555 6320600 6320599 6321651 1052 TATTTTATTGGAAAAAGCTGGTATTAACATATTTATAGTTTTATTCAACAA---TTGGGTAATTTGTGAGACACCAAAGAAAAAAAGAATGCACCTATGAGTTACAGAGTCCAAACTGATCAGGGCTGACAACTTGACCACCATGTATCCCACACCACCACCCCCACCACCACCACCACCAACAGCTTCGTCCTCAGAGAAGAGCTAAATTAAAAACAAAACCAAAAAAACCCCAACAACTTCACAATGACTATGTGAACGC-CCGTACATTCGAGAGTACCAGGAAA----TGTA--AGCAGAGCCAG-GATGCAAGTCTGTGACTATTACACTGGTCCTTCCACCGTTTCTGGTTTTGTCCCTCCCCTCGACACCTTTTCTTAACACACATTTGATCTTCACAATTTGCTTTGG-ACATCATTA-TTTTCCAGGGATCCAGAGACATACTTTTCTTCAAAGAAGATCTTTTCCTTTCTTTTTTCTTCTTTTTGGTTTGGTACCCAAAGTTT--------------------------------AAAACAGAAGTAAGGAACTAGGAACTGTATTAAGACCTCCTTTTGAAGGA--CATGTAAGATTTGTACTTTGAAGATGGTAAATGTTAAATCTATGATGTGACAGTAACCTCTAGCTGCAAATACAAGTTTCTTCTCTTAACA-------TTTGACTCACAAAGGGAGATGGATCGTAGCAAATATCCAAGTAA-TGGGTAAGGCCCTCAGAGCTGGGTTTTGGCTTTAACACGCTATCTATACAATTGACCACATTCTCGAACCTCTTTACAAGGGGGAAAAAAGTAATCCAATCCTTTGATTGTTAAATTTAATTAGAATAGATATGTACATATAATACTGTCCAGGTCAACTGGATTTTATAGTGATATATAAACAAACATTCTTCATTCACGTTGATTAAAAAAAAATCAATGATCCATTTCCCTGTGTAAATGTT--ATATGGCCAGAAGTGAGTACACATGCACTTTGTGCTTTTACACACACAAAAGTATACTGTAATCCACTGAGAATAACCTCAGCTGGGTCTGTTTCCTGGGTTATGTT---ATATCTTGTAAAAAA chr4 + 94230402 82501892 82501891 82502874 82501892 82501891 82502874 983 TATTTTATTG-AAAAAGCTGGTATTAACATATTTATATTTTTATTCAACAACAGTTAGCTAATTTGTGCAACAC---------AAAGAATGCAGCCATGAACAACAGCTTTCAAAACAATCAGATTTACCAACTTTACCATCATTTACTCTACACCACT---------------------------------------GAAAGCTCAAACTAAAAAGAGAA----AGAAAGTTGGAAACGTTCACAATGACGATGTTAACTTTCCATACATTCAAGAAGACCAGGAAACAACTGTAGTAGCAAAGTCAAAGATGGGAAT----GA-----ATACTGGTCTTTGAGAGATTTCTA--CTTACTTCCTCTGTAATCACTTTGTGTTAT--------------------TTTGGTTGGGTATTTCATTAGTTTTATAAAGCTCCAAAGATATATTTCT----------------TTCTTTAATTTTAACACCATCTT--TTTGGTACCCAGAGCTATGACAGAGTAAGGTACTTCAAATTGAaaagaaaaaaaaaaagaaagaaa--aaaagTTGTATTAAGAGCTGCTTTATAATAAGTTATCTATAGTCTCTTACTTGAGCATGGTAAAGGCTAAATATATG-TCTTACAGTA-CTTCTACCTGTAAATGCCAATATGAGCTCAGAGCAATTTTTTTTTGAGCTGCGAAGGTTAATGAGGAG-GCCAGAAGTCAAAGGAACTGAATGACGCCCTTGAAGCAGCAGTTTGGCATTAGCAACTTTCCTATACAACTTACCACATCCTTAAACCTCTTTACAAGGAGAAAAAAAAAAA--AAAGCAATT--TTGTTAAATCTCGTTAGAATAAATATGTACAC---ATACTGTCCATGCCTGCTACAGCATACAGTATTTTATAAACAAACATTCCTCATTCCCTTT------AAATGAACCTACG---CGTTTCATACCGGATGTGTTTAGTATGGCTGGAAACCGATGCGCGTGCG-TTTGTGCTTCTACACAC---AAAATATACAGCA--CTGATGTAGAAAACTTCAGACAGACGGATTTGGCGTGTTGTGTTAAGATGTCTTATAAAAGA ..........-..........................x.............---..:.x.........x:....---------..........x.:....::x....xx.:....x::.....:x:.:x......x....:...x..::.:.......:---------------------------------------...::x::...:......x.:..----.:...x::x:.x.xx...........x....x...x:-..:.......:...:x.........----....--....:..:..:-....x:.:.----..-----.:.......:..xx:xx:.....:--:..::::.::.:x.x:x...:..x.x...x--------------------....x..x..-.:x......-....x:.::.x....:...:...:..:.----------------...:..xx....xx.x:.x.:..--...........:..:.x--------------------------------....x.:...x...:..--.::.::..........x..x....xx..x:.--:..x..x::.:.x.xx:....:x........x.:.....x....-.x.x......-.:....x...:....:.x.:.x.xxx...xx.:..-------.....x:::.:....xx:...::xx.-:x..:.x:..x...x..-..::.:.x.....:::...x.x:x......x...:..xx:.x:........:.x.......:..::...............:.:......:x..--x..x.xx..--.........:.x:........:.........:---..........x.:.x:..:x.x:x..:...:x.x...............:......x.x..------...x:..:.x.:.---.:....x:xx:.x.x:....--:......::...::x::.:.:.:...:-.........:.......---...:.....x.:.--.::x..x::.x...:....x::.::xx:...xx:.x...:....---..:....:.....:. 10M1D40M3I20M9D76M39D23M4D37M1I25M4I4M2I11M1I9M4D2M5D24M2D30M20D10M1I9M1I28M16D23M2D17M32I17M2D31M2I44M1D10M1D35M7I26M1D17M1I94M2D9M2D32M3D61M6D13M3D20M2I27M1D17M3D13M2D44M3I15M 645/923 69.9% 983/94230402 0.0% 189/923 20.5% -76181292 -18049110 +20746 chr4 + 190214555 6323236 6323235 6323635 400 TCGTGAAGGTCATGTC-GGGGATGACTTGCATGAGGCTGGGTGGCAGGGGCCGGGAACTGC--ACATACCTAGTGCATGTCAGAGTTTACCTTGTCCTGGAAGATGTACAGGTTGTTGGTGGCGGCGATGGCAATGATGTTCTCAGCCGGGTGCCAGGCCGTGTGCAGGATCTTCTTGGTGAAGTCCAAGCTGTCCACACTGATGTCATCACGCCGGCGCTTGCCCCCCACGCACACGCGCCGTGGCTTGAGCACAGCCCGGGGCTTGCTGCTTTCCCTCGAGGCCTCCAGGGTCACGTCCCGCTTGGTGTTCCGATCGAACATGCGGAAGAAGTTGTTGTAGGCCCCGGTCATGATGACGCTGGTGGGAGAAGGAGAGGCATCAGGTGAGGAGGAGCACAAG chr4 + 94230402 82504376 82504375 82504776 82504376 82504375 82504776 401 TTGTGAAGATCACATCCTTTTACAACTCTCAAGAGGCTGGTTTGTAGATACAGAGGGATATTGATAAACCTAGTGCATTTCTGAGTTCACTTTATCCTGAAATATGTAGAGATTGTTTGTCGCTGCTATAGCAATGATGTTCTCGGTCGGGTGCCACGCTGTGTGCAAGATCTTCTTAGTAAAGTCCAAACTGTCGACACTGATGTCATCTTTCCTCCGTTTGCCACCCACACAGACTCTCCGAGGCTTGAGAATAGCGCGGGGTTTGCTGCTCTCCCGGGATGCCTCCAAGGTAACATCCCGCTTGGTGTTTCGGTCAAACATTCGAAAGAAGTTGTTATATGCACCTGTCATGATGACACTGGGGAGAGAAAGAGAGG--GTGGGGGGGGAAAAAAACAAG .:......:...::..-xxxx.::...:x..x........x.x.:..:x:.x.:.::x.::--.:.x...........x..x.....:..:..:.....:..x.....x..:.....x..x..x..x..:..............:.:.........x..:.......:.........:..:........:.....x..............x:x..xx..:.....x.....:..x..x.x...x........x.:...x.....:........:....xx..x.......:...x..:..............:..:..:.....x..:...........:..x..x..x...........:....x.:.....:......--x::..x.:...::.:x..... 16M1I44M2I317M2D21M 302/398 75.9% 401/94230402 0.0% 5/398 1.3% -76181140 -18049262 +6645 chr4 + 190214555 6329258 6329257 6329356 99 TTACCTGTCGCTCCCGTTCCAGGCACATTCAAACTTGTCGAAAATGCAGTCGTTCTCGTACAGGGAACAGAGCTTGCTCCGAAGGTAGTCATGGACCTG chr4 + 94230402 82512296 82512295 82512394 82512296 82512295 82512394 99 TTACCTGTCTGATCCATTCCATGCACATTCAAACTTGTCAAAGATGCAGTCGTTTTCATAGAGGGAACACAACTTGCTCCTAAGGTAATCGTGAACCTG .........xxx:..:.....x.................:..:...........:..:..x........x.:........x......:..:..:..... 99M 82/99 82.8% 99/94230402 0.0% 0/99 0.0% -76183038 -18047364 +11599 chr4 + 190214555 6333553 6333552 6333754 202 GGTGCCCACCTGGTAGGTCTCTATGGGTCTTGCCTCCATGTTCAGGTCCCAGACCTTGACTGTAAGGTAGTCCCGGGTGAGCATGTAGCGGCCGCTGTGGCTGAACTTCACGTCGGACACGGAGGAGATGATTTCCGAGAAGAATGAGCGGTTACTGGGGTCCTCAGGCTCTTCAAAGACTG--TGGAGACAGAGAAGCAATGG chr4 + 94230402 82518716 82518715 82518919 82518716 82518715 82518919 204 GATACCTACCTGGTACGTTTCTACAGGCTTTGTTTCCATGTTCAGATCCCAAACCTTGACAGTGAGGTAATCTCTTGTTAGCATGTATCTACCGCTGTGACTGAATTTGACATCTGACACTGAAGAGATAATTTCTGAAAAAAATGATCTGTTACTGGGGTCTTCTGGTTCTTCATAAACTGTTTAAAGAAAAAGAAGCAAGGG .:.:..:........x..:....::..::...::...........:.....:........x..:.....:..:.xx..x........x.x:........:.....:..x..:..x.....x..:.....:.....:..:..:.....x.x............:..x..:......x.:....--.::...x.:........x.. 182M2I20M 156/202 77.2% 204/94230402 0.0% 2/202 1.0% -76185163 -18045239 +3494 chr4 + 190214555 6337087 6337086 6337160 74 CATCTTTGTTTCTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834537 85834536 85834610 85834537 85834536 85834610 74 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...:.x...:.x...:.............xx..:..x::...:....:..x...:..:.x...::.:.:...:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -79497450 -14732952 +3590 chr4 + 190214555 6337091 6337090 6337160 70 TTTGTTTCTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834539 85834538 85834608 85834539 85834538 85834608 70 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA .....x.....:...........:...xx..:..x::...:....:..x...:..:.x...::.:.:... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -79497448 -14732954 +3045 chr4 + 190214555 6342113 6342112 6342173 61 CACACACACACACACATACATATATATACATACATATATATATAAGAAAAGAAAAAGTTAG chr4 + 94230402 6083186 6083185 6083246 6083186 6083185 6083246 61 CGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAAAAGGTTTAG .:..:.....x...:...:........x.x.....:..x.x.x..:....:...::x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 258927 NA +3558 chr4 + 190214555 6343580 6343579 6343688 109 CATGGTGGCACACACCTGTAATCCCAGCTACTCCAGAGGCTGAGGTGAGAGAATCCCTTGAACCCAGGAGGTGGAGGCTGCAGTGAGCCAAGATCGTGTCAGGGTGATG chr4 + 94230402 76033197 76033196 76033297 76033197 76033196 76033297 101 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATG ..::....::...:--....:.:.........:x.:........x:xx.x...x.x...........:..x.xx:.....:..------..x..x:..:..:.xx.... 14M2D67M6D20M 71/101 70.3% 101/94230402 0.0% 8/101 7.9% -69689617 -24540785 +12654 chr4 + 190214555 6347840 6347839 6348033 194 ACTTACGCTTGGAATGCTTGTCACACAGGGCAGCTGCCCGCATGTCGCAGAGCCGCAGGGAGCCCTTGCTGCTGCTGTAGACGAAGAGGTTGCAGTGGTGCGGATGGAACTCAGATGCTGTGATCACCTCCGTAAGGTCCTCCATGTTGGCCGGCTTGATGTCCACGATGTCTGGG-GGCAGTGCGGTCAAGGAA chr4 + 94230402 82531880 82531879 82532074 82531880 82531879 82532074 195 ACTTACGCTTGGAATGTTTGTCACAGAGGGCTGATGCTCTCATGTCACAGAGTCTCAGGGAGCCTTTGCTGCTGCTGTAGACAAAGAGATTGCAGTGATGGGGATGAAACTCAGAGGCTGTAATTACTTCTGTCAGGTCCTCCATATTGGCTGGCTTTATATCTACAATGTCTGAATGGAAGTTTCATTAAGGAA ................:........x.....x.x...:.x......:.....:.x.........:.................:.....:........:..x.....:........x.....:..:..:..:..x...........:.....:.....x..:..:..:.......::-..x...x:x:.:...... 176M1I18M 159/194 82.0% 195/94230402 0.0% 1/194 0.5% -76184040 -18046362 +5580 chr4 + 190214555 6352407 6352406 6352565 159 TGCTTCACAAGGTTCATTTCAGGACTGGCCTCCCTTGGGAACAAGCATAATTAGGCTCATTTAAGAGTCCCCTTTCCCCTGGCAAAGCTGCTTGAATTATTCATCTTCTGTTTTCCCATCTAATTCCA-CTCCAACTGTCTGGTGGGATTTGTTTCCCTT chr4 + 94230402 82540201 82540200 82540360 82540201 82540200 82540360 160 TGTTTTGCAAGGTTAATTTCAAGTCGAAACTCGCAAGGGAATGAGAATAATTAGGCCCATTTAAAAGAATTCTCCCCTCTGGCAGAGTCAATTGAATTATTTATACATTATCTTTTCATATAATTGTACCTAGGACTGCGTAAATGGTTTTTTTTTTTTT ..:..::.......x......:.x.x::x...x.xx.....::..x..........:.......:..xx::..::..:......:..:::x..........:..x:x:.:.:..::...x.....x:.-..xx:....:x.::xx..x...x...:::.. 128M1I31M 103/159 64.8% 160/94230402 0.0% 1/159 0.6% -76187794 -18042608 +3561 chr4 + 190214555 6371613 6371612 6371745 133 AGGGCCTGGGTTTCAGGCCCAGCTTTGACACTTGCTGGC-TGTGAGCTTTGAGCAAGTTAACTTGAGTGCTCTGTGACTCAGTTTCCTCATCTGTAAA----GGAGACTTAGAATAGTACCTACCTCATAGGGTTGTT chr4 + 94230402 13242433 13242432 13242567 13242433 13242432 13242567 135 AAGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGA-CCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACT--TACCTACCTCGCAGGGGGGTT .:.:.:..:.x.:::xx.......:..x....x:..x:.-.....-.:...:......:.xx.x.xx.x:::x:..x..........:..........----...x...xxx.x.--..........::....xx... 39M1I5M1D52M4I13M2D21M 89/130 68.5% 135/94230402 0.0% 8/130 6.2% -6870820 -87359582 +13223 chr4 + 190214555 6372496 6372495 6372704 209 CACTGGCCAGG---CCACAGTGAAGGATACTGAAGCTCCTGTCGGTGATGGCCAGGTGCCAGAGGTTGATGCGCAGGTCATCCGCCGACATGTAGGTCTCGCAGTCACTGTTGACGGAGATGGAGTTGATGTGGTAGGTGTGGCCATTGGCAAAGATCCTCCGAGGGCTCACCTCCACCATCAGATCCATGGGCTTCAGCACTGGCACCTGC chr4 + 94230402 82549144 82549143 82549355 82549144 82549143 82549355 212 CACTGAGCAAGGAACCACAATAAAGGATACTGAAGCTTCTATCTGTGATTGCTAAATGCCAGAGATTAATCCTGAGATCATCCGCTGACATGTATGTCTCACAGTCACTGTTGACAGATATTGAGTTGACATGATAGGTGTGACCATTAGCAAAGATTCTCCGGGGAGTGACTTCTACCATCAAATCCATAGGTTTCAGTACAGGCACCTGC .....:x..:.---.....:.:...............:..:..x.....x..:.::........:..:..x.xx..:........:........x.....:..............:..x..x.......::..:........:.....:........:.....:..:x.x..:..:.......:......:..:.....:..x......... 11M3I198M 168/209 80.4% 212/94230402 0.0% 3/209 1.4% -76176648 -18053754 +4382 chr4 + 190214555 6373781 6373780 6373936 156 CCAGGGCACCCAG----CCTGTGTGTGTGGGAGTGTGCAT---GGCTGAGAGTTCATGTATGAGTGTGTGCATATGAGTGTGCATGTGAGTGTGCATGCATGACTGAGTATACGTGTATGTGCATGCATGTGTGTGTGTGTGTGT--GTGTGTGTGTGCACGCAG chr4 + 94230402 5214149 5214148 5214309 5214149 5214148 5214309 161 CCAGGGCTCGCCGGGCTCCTGGGGCAGTGGGGGTGTGGATATGGGCACAG----CAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAG .......x.x.x.----....x.xxx.....:.....x..---...xx..----..xxx:..x:x......x:...:.:::....x:.x......:::x:..x...x::.:..:.x..:...:......x..::........:.:--::...........:.... 13M4I23M3I7M4D91M2I18M 103/152 67.8% 161/94230402 0.0% 13/152 8.6% 1159632 NA +8844 chr4 + 190214555 6375807 6375806 6375952 146 ACCGGAGCTCACCTGCAGTGACGTCACCGTGGACAGGTCCTTAAGTTTCCCCTCTTCATCCTTCAGGTTGTATCCTTCGGGCCTTTTATCTCGTTCGGTAATCTTCCATAATTTGATAGTTTTATCTTTAAAAACAGAACAAAATA chr4 + 94230402 82550862 82550861 82551007 82550862 82550861 82551007 146 ACAGCATCTTACCTGTAGTGATGTTACTGTAGAAAGATCTTTAAGCTTTCCTTCTTCATCTTTTAAGTTGTACCCCTCTGGCCTCTTATCTCTTTCAGTAATTTTCCATAACTTGATTGTTTTATCTTTAAAAGAAGAGAGAAACA ..x.x.x..:.....:.....:..:..:..:..x..:..:.....:..:..:........:..:.:......:..:..x.....:.......x...:.....:........:.....x...............:x...:x:...:. 146M 113/146 77.4% 146/94230402 0.0% 0/146 0.0% -76175055 -18055347 +11730 chr4 + 190214555 6378402 6378401 6378581 180 CTCACCGTTGGTGGACAGGAGTGAGTGGGCGGCGTTCTGCTGTGGGAGCCACTTGATCTTGTTGATCTTCTCCTCTATCTCCAGGCTCTTGAGATAGTCAAACTCCGGCTCGTGGCTCTGGAAAGTGCTGTACACGTCGTATTCGCCCTGGCTGTGGGGCGCATTTTTACTCTGCAGGGA chr4 + 94230402 82555323 82555322 82555502 82555323 82555322 82555502 180 CTTACCATTTGTTGATAAAAGTGAGTGAGCTGCATTTTGCTGCGGTAACCACTTGATCTTGTTTATTTTTTCTTCTATCTCCAAGCTCTTCAAATAATCAAATTCAGGTTCATGGCTCTGGAAAGTGCTGTAAACATTGTACTCCCCCTGACTGTAAGGCTCATTTTTACTCTGCAGAGA ..:...:..x..x..:.::........:..x..:..:.....:..x.:...............x..:..:..:..........:......x.:...:.....:..x..:..:....................x..:.:...:..x.....:....::...x................:.. 180M 144/180 80.0% 180/94230402 0.0% 0/180 0.0% -76176921 -18053481 +3166 chr4 + 190214555 6379985 6379984 6380034 50 CTTCTCCTCCTCCCCTCCCCTCCCCTGCCTCTCCTGCTCCATCCCCTCCT chr4 + 94230402 10982909 10982908 10982958 10982909 10982908 10982958 50 CTTCTCCACCTCCACTCCCCTTACCTTCCTCCGCTCCTCCATCTCCTCCT .......x.....x.......:x...x....:x..x.......:...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -4602924 -89627478 +7665 chr4 + 190214555 6380992 6380991 6381114 123 CGCACCTCTGGTTCCCGCTGGAAGATGACGACCCGGCCGCCCTTGTCACCTGTGGCCAGCAGCTCTCCCGTGTGGTTGAACTCAACGGTAGAGATGATGTCAGCT-GGGAGGGGAACAGCAAGA chr4 + 94230402 82556081 82556080 82556204 82556081 82556080 82556204 124 CATACCTCAGGTTCCCTTTGGAATATAACAACCCGACCCCCCTTGTCACCAGTAGCCAGCAGTTCTCCAGTGTGGTTGAACTCAACTGTAGAAATAATATCAGCTAGAGGGGAGAAGAGAAAGA .::.....x.......x:.....x..:..:.....:..x...........x..:........:.....x.................x.....:..:..:......-.:.:..:...x..x.... 105M1I18M 100/123 81.3% 124/94230402 0.0% 1/123 0.8% -76175089 -18055313 +3139 chr4 + 190214555 6382650 6382649 6382689 40 CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -68865399 -25365003 +3353 chr4 + 190214555 6382652 6382651 6382691 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -68865397 -25365005 +3567 chr4 + 190214555 6382654 6382653 6382693 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -68865395 -25365007 +3102 chr4 + 190214555 6382656 6382655 6382691 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -6218648 -88011754 +3353 chr4 + 190214555 6382656 6382655 6382695 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -68865393 -25365009 +3139 chr4 + 190214555 6382658 6382657 6382697 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -68865391 -25365011 +3316 chr4 + 190214555 6382658 6382657 6382693 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -6218646 -88011756 +3102 chr4 + 190214555 6382660 6382659 6382695 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -6218644 -88011758 +13316 chr4 + 190214555 6405497 6405496 6405828 332 AGGATTCCGAATTTAATTATGAGGAAGGGACCCCAAGGGCAACCCCGTGCAGAGCAGTCACACAGC-ACTTTCATTACTCTTTATGGCTTCCTGGGCCCATTAGCA-AATCCCCCAGGTTCCTGGGGAGTGATTAGATGGAGGGAGGGGCTGGGCCTGCTCCCAGGCCACAGGGGAGGGTCAGGGTCTGGGAAGCAGCCCCTCTTGAATCCAGATGCTGACATGACAACATCACGAAAACCTCATTTGCAAACCCAAATTAGTGCCATCTTGATGATCATATAAAAGAAGGATGGGCCTATAAAGCCAGCCACGGACAAGCGTGGCCATGGGGA chr4 + 94230402 82572852 82572851 82573179 82572852 82572851 82573179 328 AAAATTCTGATTTTAATTATATGAATGGTATTCTATATACATTTAATTGCAAAGCAGTAACACAACCACTTTCATTACTCTTTATAGCTTCAGATACCCATTAGCACAATCCCCAAGGTTCCTTGTGAATAATTAGATTAGGAAAGGGG--GACTCTGATAATATGCAATAGGATGTGGT----ACTTATGAAACAGCACAACCTGAATCCAGATGCTGACATGACAACATCATGAAGGGCTAATTTGCACATCCAAATTAATACCGTCATGATGATAATATAAAAGAAAGATATGCATATAAAATGAGCTACAGAAAATAATGTCAAAAGGAA .::....:..x.........:x.:.x..x.::.:.x:x:..x::xxx....:......x.....:.-..................:.....xx:x:..........-.......x........x.x..:.:.......x::.::.....--.:x:...x.xx:.x..x.:...:x:x...----:::.:x...:....x.xx.:.............................:...::x..x.......x.:........:.:..:..x.......x...........:...:x..x......::x...:..:..x..xx:..x.x.x:..:. 66M1I39M1I42M2D29M4D150M 231/326 70.9% 328/94230402 0.0% 8/326 2.5% -76167355 -18063047 +6279 chr4 + 190214555 6410175 6410174 6410352 178 CGAGCTGATGAAGCAGAGTGTGAGCTGTGATTATACCAGGCTCGA-----GTCTGCTGGAGTAGTGGGAGCAGGCTGGGCGCACTTGTTCACACAGAGCCTAATGAAGCGTCCCATGTTCTACAAACCTCAGCGTGTGATTTAATTAGCCCTCTGTTCCGGGTATGCCCTCGTCACCCATCAT chr4 + 94230402 82576928 82576927 82577109 82576928 82576927 82577109 182 CAAACTAATGAAAATGTGTGTAAGCTGTAATTACACT-GTCTCAGTGAATGGCACTTGGGGTATTGTGAACAGATTGTACAAGTTAATTCACACAGGGCTTAATGAAGCATTCCCTGTTCTACAAACTTCACCACTTGATTTAATTAACCTTCATACCTATACACGCACTACCTACCAATCAT .:.:..:.....:xx.x....:......:....:..:-.x...::-----.x.xx:...:...x..x..:...::..x:.:x::.x:.........:..:.........:.:..x............:...x.::x...........:..:..xxx:.::x::.:..x..xx::...x..... 37M1D7M5I133M 117/177 66.1% 182/94230402 0.0% 6/177 3.4% -76166753 -18063649 +7997 chr4 + 190214555 6439221 6439220 6439418 198 GTATCAGCAGAAATGACTAATTACTCTAGTCTGAAGCCCAAAAAGATAAAGCATTAGATTTATCATAAATGCAAGGCTGCACACTCTTGTAGAAATGACTCCTTCTGCAGTTTGTGACGTGCACTGATTTATGACACTACAT-------TCATACGGGGGTGCTTTTCCAGTTTCTAATGCTCTAAATGAGACACGGATTAAAAG chr4 + 94230402 82600939 82600938 82601131 82600939 82600938 82601131 193 GTATCAACATAAATGACTAATTACTTTAATCAGGAAGCTCAAAAGATAAAGAATTTGATTTATTATAAATACAGGG--GCTTGCTCTCATAAAAATGAGTTGCTCTGCAGTTCAGGACACGCATTGATTTATGGCACTACTTGTAATTCTCTTAT-----TATTTTTACATTTAATAA-----TAGGTGAAAAATGGATTAAAAG ......:..x...............:..:..x.:.:x.:x...........x...x.......:......:..:..--..x::....::..:......x.:x:.........::x...::...:.........:......x.-------..x..:-----.::....x..x..xx...-----..::...:.x.:.......... 76M2D64M7I6M5D18M5D22M 140/186 75.3% 193/94230402 0.0% 19/186 10.2% -76161718 -18068684 +9566 chr4 + 190214555 6472143 6472142 6472356 214 GACAACACGTACGTTACCTTCAGTCACATAGCTGTGGTCCCGCAGGAAGCTGTGGTTAATTTTCCGCGTGTCCGTGTCCTCGCCCATTGAAGGCCGTGCCCGGTGCTCTGGGCATGCCCCGCCGCCACACACCGATGCAATCCGCAGAGGTCGCGCCGGGCGCGCGGGCCATGCCGCCGCAGCCTAGCAGGGGCGCGGG--CCGCCGGGGCCCCGA chr4 + 94230402 82628055 82628054 82628264 82628055 82628054 82628264 210 GACAGTATTTCTGTTACCTTCAGTCACATAGTTGTGGTCTCGAAGAAAGCTGTGGTTAATTTTTCGTGTGTCCGTGTCCTCGCCCATTTACAG------CAGGATTACTCAGCATGCCTATCCGCAGTGGACTGATAGCATCAGCAGAGGTCGTCACAAGAGCACCATCCATGCTGCCACTGCCTAGCAGAGGCGGGGAGCACACCGGGCTACCGA ....::.:x.x:...................:.......:..x..:.................:..:.....................x.x:.------.x..xx:x..x:.......:xx....x:::x..:...:xx...x..........:xx.::.x..:.x:x......:...:.x.........:....x..:--x.:.....x:x.... 93M6D100M2I15M 152/208 73.1% 210/94230402 0.0% 8/208 3.8% -76155912 -18074490 +4158 chr4 + 190214555 6496725 6496724 6496803 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAGCCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.x..x...x.......:...:....x.xx:..:..:.. 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% -69536476 -24693926 +3115 chr4 + 190214555 6510978 6510977 6511058 81 AACAAAAAAAAACAAACAAACAAAAAAAAAAACAGAAAATGTTTGTTGAATGAATGAATAAGAGGAACTTTATTTGATTTC chr4 + 94230402 25733608 25733607 25733687 25733608 25733607 25733687 80 AACAAAAACAAACAAACAAACAAAACAAAAAAAGGAAAAAGATCTCTGGAT-AAGGAAGCCGAGACACTTGTACTGATATC ........x................x......x:.....x.x.:x:..:..-..x...xxx...:x....xxx:....x.. 51M1D29M 59/80 73.8% 80/94230402 0.0% 1/80 1.2% -19222630 -75007772 +7461 chr4 + 190214555 6511297 6511296 6511755 459 GTGGTGGTGATGGTATTGATGGTGGTGATGATAGTGAC---AGTATTGATAACTACAGTGATGGTAATGGTGGTGGTGGCGGTGATGGTGGTGATGGTGATGGTGGTGATGGTGGTGGTGACAGTGATGGTGGTGATGGTGGTGGTGACGGTGGTGGTGGTGATGATGACGGTGGTGGTGGTGATGGCGGTGTTGGTGGTGATGGCGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGATGGCGGTGGTGGTGGTGGTGGTGATGGGGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGTTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGAT---GGTGGTGGAGGTGATGGTGGTGATGGTGGTGGAGGTGATGGTGGTGATGGTGGTGGAGGTGATGGTGGTGATGGCAATG chr4 + 94230402 92132461 92132460 92132916 92132461 92132460 92132916 456 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGG---------GACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .:.x...x..::x.:xx....x...::...x.:.x.:.---..x:...x.::xx..:xx.:x.:.:x..:x.:::x...x::..x...x.:x.....::...x...x....x..:x.:::x::.x....x...x..x:xx.:::..:x:..x.::xx...x....x...x.:..x...x.:x.x....::.:....x---------.:::x...x::::....x.:..x..:x.:..x...x.:::x...x...:x.x.x.:x.x.:.::...x...x..:xx...x.:::x.x:x.:..x...x.::.:.......:x...x....x...x.:..x...x.:..:..::.:..x...x:.:.x...x.:::x...x..x.x.---:.x....xx..x..::x...x....x...x.:..x..:::..xx..xx.:::x...:.:::x...x.:.:x...x:.:. 38M3I156M9D177M3I79M 249/450 55.3% 456/94230402 0.0% 15/450 3.3% -85621164 -8609238 +8435 chr4 + 190214555 6511819 6511818 6512289 471 ATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTTGTGGTGGCGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGAT---GGTGGTGTTGGTGG---TGGTGATGGTGGGGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATG chr4 + 94230402 92132455 92132454 92132916 92132455 92132454 92132916 462 acaGCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGAC---------------ATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .::.::.:.x...x.:::x...x.:..x...:::..x...x..:xx.:.x.x..x...x.::.xx..x.:..x...x.:::x...x::..x...x..x.:...:::..x...x.:.....:x.x::x...x.:..x...x.:x:xx..::..:x...x.::xx...x....x..:x.:..x...x..x.x...:::.xx...x.:.---------------.x...x:::::...x....x...x....x...x..::x..xx...:x.x.x.:x.x.:.::...x...x.::xx:..x.:x:x.x:x.:..x..:x..xx.........x...x....x..:x.:..x..:x.:.....::.:..x...x:::.x...x..::x...x..x.x.---:.x........x.:---...x....x.....:x.x...::..xx..xx.:::x...x..::x.....:.:x...x..:. 206M15D174M3I14M3I62M 262/456 57.5% 462/94230402 0.0% 21/456 4.6% -85620636 -8609766 +7711 chr4 + 190214555 6511939 6511938 6512400 462 GTGTTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTTGTGGTGGCGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGTTGGTGGTGGTGATGGTGGGGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGG---CGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTG chr4 + 94230402 92132461 92132460 92132916 92132461 92132460 92132916 456 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAA---CGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTG---GAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGA---AGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .:.:...x.:::x...x.:..x...::...x...x..:xx.:.x.x..x...x.::.xx..x.:..x..:x.:::x.x.x::..x:..x..xx....:::.:x...x.:..x..:x..::x...x....x...x..x:---.x..::..:x...x.::xx...x.:..x..:x....x.....:x.x...:::.:x..:xx.::x...x.:::...---.x....x...x....x..xx..::x...x.:.:x.x.x.:x.x.:.::...x..:x.::xx:.xx.:::x.x:x....x..:..:x.:.......:x...x.:..x...x....x.....:..x...:....x...---..x...x.:::x...x..x.x..xx:.x...:x...x.:::x...x....x...x..---x....:::..xx..xx.:::x...x.:::x...x...:x...x.::. 138M3D75M3D136M3I57M3D47M 257/453 56.7% 456/94230402 0.0% 12/453 2.6% -85620522 -8609880 +8608 chr4 + 190214555 6511954 6511953 6512406 453 GTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTTGTGGTGGCGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGTTGGTGG---TGGTGATGGTGGGGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGT---GGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATG chr4 + 94230402 92132458 92132457 92132916 92132458 92132457 92132916 459 GCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .::.:.x...x..::x...x.:..x...:::..x...x..:xx.:.x.x..x...x.::.xxx.x.:..x:.:x..:xx...x::.:x...x.:x.....::...x...x....x..:x..::x..xx....x...x.:x:xx.:::..:x...x.::xx...x.:x.x..:x.:..x...x..xxx...:::..x...x..::x..:x::::...:x.:.....:x.:..x...x.:::x...x...:x.x.x.:x.x.:.::.......x.:---:..x..::x.x:..:..x..:x.:x.........:x...x....x.....:..x...x....x.....:..x...x:::.x...x..:xx...x..x:x.---:.x....x...x..::x...x....x..xx..x.x...::..xx..xx.:::x...x.:::x...x.:.:x...x..:. 274M3I100M3I79M 257/453 56.7% 459/94230402 0.0% 6/453 1.3% -85620504 -8609898 +8127 chr4 + 190214555 6512068 6512067 6512520 453 GTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGATGGTGATGGTGGTGATGG---TGCTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGTTGGTGGTGGTGA---TGGTGGGGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGTTGGTGGTG chr4 + 94230402 92132461 92132460 92132916 92132461 92132460 92132916 456 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGG---AAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .:.x..:x.:::...:x.:..x...:::..x...x..:xx.:.x.x..x.....::.xx..x.:..x...xx.::x...x.:..x..:x.:x.....:::..x...---..:...x.:::x...x.:..x...x..x:xx.:::..:x...x.::x:...x.:..x...---..x.....:x.x...:::.:x...x.:::x...x:.::....:.:..x...x....x...x.:::x...x.:.:x.x.x.---.x.x.:.:....x...x..:xx:.:x.:::x.x.x.:..:...x.:x.:.......:x...x.:..x...x....x...x.:..x..::.:..x...x:::.x...x.:x:x...x..x.x.xxx:.x....x...x.:::x...x...xx...x.:x:x...::..xx..xx..::x...x.:::x...x...::...x.::. 106M3I60M3I80M3D204M 253/450 56.2% 456/94230402 0.0% 9/450 2.0% -85620393 -8610009 +9112 chr4 + 190214555 6512242 6512241 6512691 450 GTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGG---TGGTGGTGATGGTGGTGGTGGTGATGGTGGGGGTGGTGGTGATGGTGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGTTGGTGGTGGT---GGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGATGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGATACTGGTGGTG chr4 + 94230402 92132461 92132460 92132916 92132461 92132460 92132916 456 GCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTGGGGACG .:.x...x.:::x...x.:..x...::...x......:xx.:.x.x..x...x.::.xx..x.:..x..:x..:xx...x::.:x...x.:x.....::...x...x....x..xx..::x...x.:..x...x.:x:xx.:::..:x...x.:---...x.:..x..:x.:..x...x..x.x...x::.:x...x..::x...x::::....x.:..x...x...xx...x.::.x...x.:.:x.x.x..x.x.:.::...x...x..:x.:..x.:::x.---.:..x...x.:x.........:x...x.:..x...x.:..x...x.:..x...:....x...x:.:.x..:x.:::x...x..x.x..xx:.x...:x...x.:::x...x....x...x..x.x..x:::.xx..xx.:::x...x.:::x...x........x.::. 154M3I127M3I169M 260/450 57.8% 456/94230402 0.0% 6/450 1.3% -85620219 -8610183 +5848 chr4 + 190214555 6512441 6512440 6512747 307 TGGCGGTGGTGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGTTGGTGGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGGTGG------TGATGGTGATGGTGGTGATGGTGATGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGA---TGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGATACTGGTGGTGGTGATGATGGTGAGAGTGTTGATAATTACAATGATGCCAATGGTGGCAGTGAGGAT chr4 + 94230402 92132465 92132464 92132777 92132465 92132464 92132777 313 TGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGAT---GTTGAGGAAGATGGTGGTATtggggat ...x.:::x...x.:..x...::..xx...x..:xx.:.x.x..x...x..:.xx..x.:..x..:x..::....x::..x...x.:x.....::...x...x....x..:x..::x...x.:..x...------x..::..:x...x.::xx...x....x..:x.:..x..:xx.x.x...:.:.:x...x..---...x:.::....x....x..xx....x...x.:::x...x.:.:x.x.x..x:..:.::...x..:x..:xx:.:.::::..x.x:..---:x...x.xx:.......:.x..:.... 129M6I60M3I88M3D27M 178/304 58.6% 313/94230402 0.0% 12/304 3.9% -85620024 -8610378 +5366 chr4 + 190214555 6512479 6512478 6512712 234 GTGGTGATGGTGATGGTGGTGGTGGTGGTGATGTTGGTGGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGG---TGGTGGTGGTGATGGTGATGGTGGTGATGGTGATGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTGATACTGGTGGTGGTGATGATGGTGAGAGTGTTG chr4 + 94230402 92132458 92132457 92132691 92132458 92132457 92132691 234 GCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATG---TTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTG .::.:.x...x..::x...x.:..x...::...:...x..:xx.:.x.x..x...x..:.xx..x....x..:x..::x...---..x...x.:x.....::...x...x....x...x.:::x...x.:..---x...x.:x.xx.:::..:x...x..:xx...x....x..xx....x...x.:x.x...:::.:x...x..:.:...x::::...:x....x..:.::..... 82M3I47M3D102M 139/231 60.2% 234/94230402 0.0% 6/231 2.6% -85619979 -8610423 +4230 chr4 + 190214555 6512524 6512523 6512747 224 GTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGGTGG---TGGTGGTGATGGTGATGGTGGTGATGGTGATGGTGGTGGTGGTGATTATGGTGGTAGTGGTGGTGATGGTGATGGTGGTGATGGTGCTGATGGTGGTGGTGGTGGTG---------GTGGTGGTGATACTGGTGGTGGTGATGATGGTGAGAGTGTTGATAATTACAATGATGCCAATGGTGGCAGTGAGGAT chr4 + 94230402 92132458 92132457 92132678 92132458 92132457 92132678 221 GCAGCGCTGGGGACACTGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATG------------TTGGGGAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAAT---ATTGGGGACATTGGGAACAGTGGAGAT .::.:.x...x..::x...x....x...::...x...x..---.:.x.x..x...x..:.xx..x....x...x.:::x...x::..------------x...x.:x.....::...x...x....x..xx..::x...x.:..x...x.---------..:x...x..:x....x.:..x...x....x..:.::x.:..::...---.x..:x.x..x...x::.....::... 40M3I44M12D51M9I47M3D27M 132/209 63.2% 221/94230402 0.0% 27/209 12.9% -85619934 -8610468 +3761 chr4 + 190214555 6537063 6537062 6537132 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:.........:.::........x.xx.x...x.............:.. 10M2D58M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% -69496134 -24734268 +3160 chr4 + 190214555 6554911 6554910 6554982 72 GAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAG chr4 + 94230402 86089084 86089083 86089155 86089084 86089083 86089155 72 GGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAG .:..:.:....::.:x.x...:..:...:...:.....x..:::...x...x:.:.:...:...x..x.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -79534173 -14696229 +3720 chr4 + 190214555 6562378 6562377 6562445 68 CTGTGTGGCCTCGGGCAAGTTACTTAACTTCTCTGCACCTCAGTTTCCTTATCCTATAATGGGGATAA chr4 + 94230402 33474158 33474157 33474222 33474158 33474157 33474222 65 CTGTATGGCCTCAGGGAAGTCATTTAGCTTCTCTGTACCTCAGTTCTTCTG---TAAAATGGAGATAA ....:.......:..x....:.:...:........:.........::::.:---..x.....:..... 51M3D14M 51/65 78.5% 65/94230402 0.0% 3/65 4.6% -26911780 -67318622 +6028 chr4 + 190214555 6563541 6563540 6564161 621 CCCTGCAGCCCGCGCTTACCTTCGGAAACTTCGAGGTCGGCGGCCCCATTGAGCTGGCACAGGCACCAGGAGCCCTGGTCGGCGGCGGGCGCGGCGGGCGCGGCGGGGGCGCGGTCAGCTGGCAAAACAGCAAGGGC-GCGTGAG-CGCGGGC--CCGGGGCGGGGGGCGGGGGGCGGGGGCGCGCGGCGAGGCTAACCCG--GCTGCTGG-------GCCATGGGCGGCTCCGCAGGCTGCGACCGCGACGGGCGTCCTCCGGGCGGCTGCGGGGGGCCGGGCGCGGCGGCCGCTCCTCC---TCCGCCTCCTCCGGGCTCGGCTCCCTGCGCGGGCGGGCGGGCGGGGAGGCGCGCCCAGAA--------GGCTCCGCCCGGAGCGCGGGTGCGGGGCGCGGGGTGCGGCTGCGGGCGCCGAG-GGTGGGCGCGGGGCGACGATCGCGAGGCGCGGATCGCAGGGCGCGGATCGCGGGGCGCGGGGCCGGGC-ACCGGGTAAGAGGCGCGGGGTGCGGGCGCGGGGCGGGGTGTGGGTGCGGGCGCTGGGGCTGTCGCCACGGACCGAAGCGTCCCTTTCTGCCCCACCC---ACCGGTCCA-GCGGCAGCCGCCTCCGCCAGCCGTCACCGCGCGAGG--GCCGCCTGCC chr4 + 94230402 82677895 82677894 82678492 82677895 82677894 82678492 598 CTCAGCGCCCCGTACTCACCTTCGGAGACCTCGAACTCGGCCGCTCCATTGAGCTGGTAGAGGCACCA---------GTCAACCGCGCTTTCGCCTGG------GGGGGCGC---CAACTGGAAGAGGAGGAAAGGCAGCGTCAGTCGGGGGCAGCCGGGAGAGGAGACGGGGAGCGGTG--GAGGAGAGAGGATGAACCGCAGCAGTGGGGAGGAGTGCGAGGAGAAACGAAGGGGACAGAGAAGGGAGCGGACGGACACGAGGGGACTACAGAGAGCCGGGAGAAAGGAGAGCGTTTCCAAATACCCTGCTTTTGGGACATG-----TGTGCAGCCCTGCGAAAGGTGCCCAGTGCTCTGAACTGTGATTTGCTCCGCTCCCAGCGCCGCC----AGCTCGGGCCGCCTCCTCCTTCTCCCAGCGGAGCGAGCGGCGCAGCAGCCGCGCTGC------CTCGGGGCGCTGA----GGGAGCCGGGGGAGGGCGGACGGGAAGGAGGGGCGGCTC---CACCCGGAGC----------TCTCGGCGGAGGCGGCGCTGCCACGGCCGGACGAgcccggccccgccgcggccgcAACAGGTGCGCGCGGGAG-CGTAGCGGCC--CTGGCGCCACGCGGTGTTACCGCCTGCC .:.x..:x....::..:.........:..:....:x.....x..:............:.x........---------...::.x...xx:x..x.x..------........---..:....x.:.:x..x..:...-....x..-..x....--.....:x:..:.:.....:....x.--.x.x:.x....x.:.x...--..x.:x..-------..x.x.:.x::.xxx.x:.:.x.x..xx.x::...:..xx.x.x:..x.:..:.:.:.:......x.x::x.:xx..x::...---.x.x.:x.:.::...x:xx.-----..:..:.x.xx...::x..x.xxxx.:..:.x...--------x.......:.xx.....x.x:----:..x....x:..xx.:x.xxx.x..x..-..x.x.x....x..::.:::....xx..------.x.:......x..----...:xx.....xx....-:x....x.:....x....xx:---x:.x...:..----------.x:x....xx..x.x:.::.......x.x..x.x.:..xx::.:...x.:x..---..x...x.:-....x..-..:xx.x...--.:.x.:..:....:x.--:......... 68M9D21M6D8M3D22M1I7M1I7M2I25M2D19M2I8M7I83M3I20M5D35M8I21M4D28M1I28M6D13M4D17M1I21M3D10M10D53M3I9M1I7M1D10M2D16M2I10M 358/566 63.3% 598/94230402 0.0% 87/566 15.4% -76114354 -18116048 +7039 chr4 + 190214555 6569641 6569640 6569822 182 AAAAAAAAGAAAGAAGAAAGAG-AGAAAGAGAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAA--------------AGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGA chr4 + 94230402 39943800 39943799 39943996 39943800 39943799 39943996 197 agagagaagagaaaacaaagagtaggaagagcgaaaagacagaagagggaattgaggaaaaaaaagaaaggagaataagcaaagagggaagggagagaagaaagaggagaagaaagaataagagaagaTAGCAAGCAGGGAGAAAGAAGAGCATAAAGAGAGAAAATGAGAGTAGAGAAGAATGAAAGAGGAAAAGA .:.:.:....:.:..x......-..:.....x.:.....x....::::::.xx...::.:.:.:...:..::::.x..:x.....::...:.:.:::........:::.....:...:x:......--------------........:::x.x.:.........:x:...:x...:.....x...:..:.:..... 22M1I103M14I57M 121/182 66.5% 197/94230402 0.0% 15/182 8.2% -33374159 -60856243 +3193 chr4 + 190214555 6569652 6569651 6569731 80 AGAAGAAAGAGAGAAAGAGAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAG chr4 + 94230402 86089083 86089082 86089162 86089083 86089082 86089162 80 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAG ..:....:.::.:..:x:x...:..:...:...:.....x..:.:..:x..:x:...:.......x..x..:::x.:... 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% -79519431 -14710971 +3506 chr4 + 190214555 6569662 6569661 6569830 169 GAGAAAGAGAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAA------------AGAAGGAAGGAAGGAAAGAAGGAAGGA chr4 + 94230402 17246056 17246055 17246230 17246056 17246055 17246230 175 GAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGG--------TAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGA .....x..::x:.x..x.::.:..........x......x:xx::....x.:.:x.x..:--..::x.:...xx:..::...:...:....:..xx.xx.:.:.:.......:x....x.:--------x..:....:...x..------------..x::....:...:x..:.x.::.:.. 60M2I59M8D15M12I27M 100/161 62.1% 175/94230402 0.0% 22/161 13.7% -10676394 -83554008 +3925 chr4 + 190214555 6569675 6569674 6569847 173 AAGAAAGAAAGAAAGAAAGAGAGAGAGAG-AGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGA-AGGAAGAAAGAAAAAGA chr4 + 94230402 49044652 49044651 49044813 49044652 49044651 49044813 162 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGA-------AGAGTTAAAGAAAGAAGAAAGGTGAAA--------AATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ..:.:.xx..::.::.....:x:.....x-..:.:x:.xx.......x.::x..x:....:x.--...x:.......:.-------....xx..........::..:.x..:.--------..x:...........:...x....x.:.:..xx:..:x-.......::.....x.. 29M1I33M2I14M7D27M8D38M1I17M 107/158 67.7% 162/94230402 0.0% 19/158 12.0% -42474977 -51755425 +3786 chr4 + 190214555 6569684 6569683 6569819 136 AGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGA------AATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAG------GGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..xx.x...............:.:.:.x....:xxx....xx:.------..x....x.x:...:.x....:.:...:..:....::...------:..x..x.xxxx:...x.x.........:. 54M6D40M6D30M 85/124 68.5% 124/94230402 0.0% 12/124 9.7% -44578695 -49651707 +3075 chr4 + 190214555 6569690 6569689 6569836 147 AAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAA------ACAGAAGTTCAGAATCGA--------------AATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTG--AAGCATGAAGGAAGGGAG .:.:...:::..xx.x...........:........------.x....:xxx....xx..--------------..x.:..x.x:..::.x......:...:..:......:.::..x:.x.xxxx.--...x.x.........:.. 36M6D18M14D53M2D18M 85/125 68.0% 125/94230402 0.0% 22/125 17.6% -44578689 -49651713 +4015 chr4 + 190214555 6569706 6569705 6569861 156 AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGGAG chr4 + 94230402 49044660 49044659 49044814 49044660 49044659 49044814 155 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGA-AGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .:.....:.::..x..:::.xx.::.:x:.xx.......x.:.x..x....-..x:xx..:x:.::..:.:.....xx.:........::..::x:...:.x.:...:..:.......x....x.:::..xx:...xx.:...::.:.::.:x... 51M1D104M 91/155 58.7% 155/94230402 0.0% 1/155 0.6% -42474954 -51755448 +4025 chr4 + 190214555 6569714 6569713 6569865 152 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGA--AAGAAAGAAAGAGA-GAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGGAGGGAG chr4 + 94230402 49044660 49044659 49044814 49044660 49044659 49044814 155 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .:.:.....::..x..:::.xx.::.:x:.xx..:....x.::x..x.....:x.--...x:......:..-...xx..........:.:.::x...::.x.:...:......:...x....x.::...xx:.:.xx.:.:..:.:.::.:x... 55M2I14M1I83M 93/152 61.2% 155/94230402 0.0% 3/152 2.0% -42474946 -51755456 +3102 chr4 + 190214555 6569722 6569721 6569803 82 AGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x:...x::.....xx.x.:.x..........::.x.x......x:..:..::.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -34542456 -59687946 +3486 chr4 + 190214555 6569734 6569733 6569840 107 AGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAA-----------GAAAGAGAG---AGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAG------AAGGAAGGAAGGAAGAAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........::.:xx:x.....................x.:.-----------....x:..:---:...::x..:......:...:...--.....:...x..------:.:.x.x........::.. 41M11I9M3I24M2D12M6I19M 78/105 74.3% 125/94230402 0.0% 22/105 21.0% -44578645 -49651757 +3922 chr4 + 190214555 6569758 6569757 6569878 121 AGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGG------AGGGAGGGAAGGAAGGAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAAT--CGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ...:....::.:xx.x...:.................x.:...xxx....x--x.:..x.:..x.x...:..x::..::...:...:::..........x:.------:::.x:x.........:.. 51M2D49M6I19M 80/119 67.2% 125/94230402 0.0% 8/119 6.7% -44578621 -49651781 +3394 chr4 + 190214555 6569905 6569904 6570013 109 AGAAAGGAAGGAGAAAGATAGAAAGAAAGAAAGCGAAAGAAAGGAAGGAAGGAGATGGAGGAAGGAAGGGAGGAAGAAAAGAGAGAGAGGAA----------GGAAGGAGAAAGAGAGA chr4 + 94230402 985428 985427 985539 985428 985427 985539 112 AGGGAGGAAGTGGAACAACAGATA-------AGGGAAAGGCTGGAGAGCAGGGGATGGGGGAAGGAAGAGACAAAGGGAAGAACGGGAAAAACACAACCCAGGTAATGAAGAAAAGAGA ..::......x:...x:.:...x.-------..x.....:xx...::.x...:.....:.........:..x:...::....:x.:..::..----------.x..x..::..:..... 24M7D61M10I17M 70/102 68.6% 112/94230402 0.0% 17/102 16.7% 5584477 NA +3624 chr4 + 190214555 6569914 6569913 6570134 221 GGAGAAAGATAGAAAGAAAGAAAGCGAAAGAAAGGAAGGAA--GGAGATGGAGG-----------AAGGAAGGGA--GGAAGAAAAGAGAGAGAGGAAGGAAGGAGAAAGAGAGACGAAAGAAAGGGAGGGAGGGAAGGGAAGGGAAGGAAGGAAGGAATGAGATGGAAGGAAGGAAAGAGAGAAAGGAAGGAAGGAGAAAGGAGAGAAAGAAAGAAAA------------AGAAGGAAAGAAAGAAA chr4 + 94230402 78372803 78372802 78373050 78372803 78372802 78373050 248 GGAGAGCACTGAGAGGGGATAGAGCACAGGGGTGGGAAGAATTGAAAATAGAGGCTCTGGCATCAAGTAAAGGGAATGAAAACAAAGAGGGAAGGAAAGGAATTAGAGAAGCAGAGAAATCAAAGGGAGGTTTAAGAGCAAAGCCAGCTTCGGTAGAGATCACAAGGAAAGAATAAAACCAAGAAGGAAAGGAGAATAAGAGCAACTGAGGGAGGGATATTGGTGGTTATGGGGAGGAAATAAAGGGA .....:x:x.:::.:.::.x.:...:x.:.::x..:.:...--.:.:..:....-----------.:x:......--.:..:x......:..::.:......xx...:.::x...x:..xx.........xxx:::..x:...xx.:xxxx..x..::..x.x.x....:...x:...xx:....:.:.....:::x:.:..x.:xx:.:.:.:.:.x.------------:.:......x....::. 41M2I11M11I10M2I142M12I17M 128/221 57.9% 248/94230402 0.0% 27/221 12.2% -71802889 -22427513 +4135 chr4 + 190214555 6569957 6569956 6570160 204 AGATGGAGGAAGGAAGGGAGGAAGAAAAGAGAGAGAGGAAGGAAGGAGAAAGAGAGACG-----AAAGAAAGGGAGGGAG------GGAAGGGAAGGGAAGGAAGGAAGG-------AATGAGATGGAAGGAAGGAAAGAGAGAAAGGAAGGAAGGAGAAAGGAGAGAAAGAAAGAAAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 61281964 61281963 61282185 61281964 61281963 61282185 222 AAATAAAAGTGGGAAGAGAAAGGGCAAAAGAACAGATGAAACCTGAAGGAAACAAAACACTGATAATGAAAATGAGAAAGTTACCAAGACAAGAATAGAAGGAACAAAAATCCCTTAAAGGAAATATGTGGAGGGAGAGAAATACTAGAAGCAAAGGAAAGACAGGGTAAGGAATAAATAAATGGAACGACAGAGAACAGAAATGGCAGAAGGAAATTAGGA .:..::.:.x:.....:..::::.x...:::.x...x...:xxx.:..:..:x:.:..:-----..x....:x...::..------:..x::...x:.......x:..::-------..x..:..:x:x...:...:...:.x.xx:....x..:.::..::x..:.x...:..x...x.:.x....x..x...:.:x.::..x.:x....:....xx.:.. 59M5I16M6I24M7I105M 120/204 58.8% 222/94230402 0.0% 18/204 8.8% -54712007 -39518395 +3824 chr4 + 190214555 6569980 6569979 6570144 165 GAAAAGAGAGAGAGGAAGGAAGGAGAAAGAGAGAC----GAAAGAAAGGGAGGGAGGGAAGGGAAGGGAAGGAAGGAAGGAATGAGATGGAAGGAAGGAAAGAGAGAAAGGAAGGAAGGAGAAAGGAGAGAAAGAAAGAAAAAGAAGGAAAGAAA-------GAAAGAAAGAAAGA chr4 + 94230402 32265482 32265481 32265657 32265482 32265481 32265657 176 GGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAA .:.x.::.:.:..x.x...:..x.x::....:::.----.x:..:.:x.x::..:...:..xxx:........:::x:x:x:..x::..........:........:.::.:..:::.::.:...:..::...x..x::.:..:x...xx..x.:-------....x.:.....:. 35M4I116M7I14M 95/165 57.6% 176/94230402 0.0% 11/165 6.7% -25695502 -68534900 +3053 chr4 + 190214555 6570124 6570123 6570179 56 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 83419839 83419838 83419894 83419839 83419838 83419894 56 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAA ........x...:.:x..x::....:x....x...x..:.............:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -76849715 -17380687 +3276 chr4 + 190214555 6574516 6574515 6574589 74 GTGCCCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGGGCCCGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x...:..:.........::::........x:xx.x.:.x......::...:.:..x.:x:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -69458688 -24771714 +5726 chr4 + 190214555 6575092 6575091 6575353 262 CGGCAACCAATGGGCCCCGCCCCCGCCCGCAGCCAATGGGCCGCGTCCCCGCCCGCGCGGCCG-CCCCGCCCCTCGCGGACCCGGAAGTGG--GCCTGGCACCTTCCCGGCCTGCCGCAGGGATGGGGCAGCTGTGCTG-GCTGCCGCTGCTGGCACCGCTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCGCCGGCC-CCATCCG------------GGCCTTCGTGGTGCCCCACAGCCACATGGACGTGGGCTGGGTCTACACTGTGCAGGTAGG chr4 + 94230402 82681020 82681019 82681284 82681020 82681019 82681284 265 CGGCGAGCA---GGCCCAGCAACCGCTCGC--CCAACATGGAGCCGCCCAAGCCGGGAGGCGGGACCCGACCGCAGCGGGGCGGGACGCGGAAGCTCGGC-CGGCCCCGGGTTGCTGCCGGCCGGGCCGGGCTGGGCCGCGGAGCTGCTA-TGGGTCCTCTGCTGCTGCT-CATCTGCC------TCGCCCTGCCGGCCACCAGCCGCGGGGAGCTGCGGGCCTTCGTGGTCGCCCACAGCCATATGGACGTCGGCTGGGTGTACACCGTGCAGGTGGG ....:.x..---.....x..xx....:...--....::x.xx..xx...x:x...x.x...x.-x....x..x:x....:x.x...x.:..--..::...-.xx:.....x:...:..x..xxx..xxx:....x..:.-.xx..:...:-...xx..x..x...:....-.:x.:...------:.:x:.:.......-...x...------------............xx..........:........x........x.....:........:.. 9M3D18M2D31M1I27M2I7M1D38M1I10M1D19M1D8M6D14M1I7M12I60M 176/248 71.0% 265/94230402 0.0% 31/248 12.5% -76105928 -18124474 +6526 chr4 + 190214555 6578385 6578384 6578503 119 ATGTCA-AGGTCCGCCAGCTCCTGGAGGAAGGACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGAGGCTGTGACGCACCTTGATGACCAGATCCTGCAGCTCACAGGTTTG chr4 + 94230402 82688152 82688151 82688271 82688152 82688151 82688271 120 ATATCATAGGTCCATCAGTTACTTCAGGAAGGACGATTGGAATTTGTCATTGGAGGGCAAGTGATGCATGATGAAGCTGTGACACTAATTGATGATCAGATTTTACAGTTGACGGGTATG ..:...-......::...:.x..xx..........x:.............:.....x..:..x........:..:........:.xxx.......:.....::.:...:.x..:...x.. 6M1I113M 92/119 77.3% 120/94230402 0.0% 1/119 0.8% -76109767 -18120635 +10874 chr4 + 190214555 6586988 6586987 6587172 185 CTTTGCAGAAGGACACGGGTTTCTCTATGAAACATTTGGGATCCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGGCGCCTCTGCCACGACGCCCACCCTATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGATCGACTACGACCTGAAGGCAGCCATGCAGGAGGCCCGGGTGA chr4 + 94230402 82690325 82690324 82690509 82690325 82690324 82690509 185 CTTTGCAGAGGGCCACGGGTTTTTATATGAAACTTTTGGGATCAGACCTCAGTTTTCTTGGCACGTTGATCCTTTTGGAGCCTCAGCTACAACACCAACTCTTTTTGCTCTTGCTGGCTTTAATGCTCATCTTATCTCTCGAATTGACTATGACCTGAAGGCTGACATGCAGAAAAACAAGGTAA .........:..x.........:.x........x.........x.:..x.....:..:...........:..x.....x.....x..:..:..:..x..:..x.....x..x..x.....:.....:..:..::x...:..:..:.....:...........x.x.......:.::x.x:...:. 185M 143/185 77.3% 185/94230402 0.0% 0/185 0.0% -76103337 -18127065 +3520 chr4 + 190214555 6587696 6587695 6587764 69 TTTCTTTTCTTTTGTT--TTTTGTTTTTTGGGTTTTTTGGGGTCTTTTGGGTTGTTGTTTTTTTTTTTTTT chr4 + 94230402 7541527 7541526 7541592 7541527 7541526 7541592 66 TTTGTTGTTTTTTGCTGCTTTTTTTGTTTGGGTTTTTGGGGGTTTTTTGGG-----GTTTTTTTTTTTTTT ...x..x.:.....:.--....x..x...........x.....:.......-----............... 16M2I33M5D15M 56/64 87.5% 66/94230402 0.0% 7/64 10.9% -953831 -93276571 +3254 chr4 + 190214555 6587707 6587706 6587772 66 TTGTTTTTTGTTTTTTGGGTTTTTTGGGGTCTTTTGGGTTGTTGTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 8321206 8321205 8321271 8321206 8321205 8321271 66 TTAATTTATCCTCTTTTAATTTATCAGGGCTTTCTAGGTTGTTGTTTTTTTGTTTTTTTGTTTTTT ..:x...x.x:.:...x::...x.::...::..:.:...............x.......x...... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -1733499 -92496903 +3206 chr4 + 190214555 6587710 6587709 6587772 63 TTTTTTGTTTTTTGGGTTTTTTGGGGTCTTTTGGGTTGTTGTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44445679 44445678 44445741 44445679 44445678 44445741 63 TTTTTAGTTACTGTGACTTTATGATGTCCTCTGAGTTACTGTTTTTTTTTTCTTTTTTTCTTT .....x...x:.xx.::...x..:x...:.:..:...::............:.......:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -37857969 -56372433 +6847 chr4 + 190214555 6589034 6589033 6589162 129 TCGGTTTGCAGGGGCTGCAGTTCGTGTGGCGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCACATCATGGACCAGTACAGCTACTGCACCCCGTCCCACATCCCTTTCTCCAACAGGT chr4 + 94230402 82691456 82691455 82691584 82691456 82691455 82691584 129 TTGTTTTCCAGAAGCTTCAGTTTGTATGGCAGGGTTCTCCTTCCTTATCTGAAAGTCAGGAGATCTTCACCCATACTATGGATCAGTACAGCTACTGTACCCCATCGCAACTGCCTTTTTCAAACAGGT .:.x...x...::...x.....:..:....::..x..:..x...:.x..x..:x.x.....:........x..:.::.....:..............:.....:..x..xx.x.....:..x....... 129M 96/129 74.4% 129/94230402 0.0% 0/129 0.0% -76102422 -18127980 +3226 chr4 + 190214555 6591024 6591023 6591090 67 TGTAATCTCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCCACAAGATGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.::.......:..::........x.xx.x...x.......:....x...x.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -69442187 -24788215 +8205 chr4 + 190214555 6593171 6593170 6593355 185 AGGTCAGGATTTTACTGGAATGGCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATGGGGTGTACCCCAACATGAGTGAGCCTGTCACCCCAGCCAACATCAACCTCTATGCCGAGGCCCTGGTGGCCAACGTGAAGCAGAGGGCCGCCTGGTTCCGGACACCGCACGTCCTCTGGCCCTGGGTAAG chr4 + 94230402 82692621 82692620 82692805 82692621 82692620 82692805 185 AGATCAGGATTTTATTGGAATGGATTTGCAGTTTTCCCAGATCCACCAAAAGATGGTGTTTATCCAAACATGAGTCTCCCTGTTACAGATACCAACATCCATATGTACGCACAGGCCATGGTGGCAAACATTAAGGAGAGAGCAGTCTGGTTCCGAACAAATGATGTTTTGTGGCCATGGGTAAG ..:...........:........xx.x..x..:.....x:.x..x..xx.......x..x..:..x.........xxx.....:..xxxx:........x.:x.x..:..xx.....x.......x...:.x...x....:..x.:.........:...xxxx.:..::.x.....x........ 185M 134/185 72.4% 185/94230402 0.0% 0/185 0.0% -76099450 -18130952 +7945 chr4 + 190214555 6594531 6594530 6594735 205 CAGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGGCGACTACTTCCGTGCCCTGCACGCTCTCAATGTCACCTGGCGTGTCCGCGACCACCACGACTTCCTGCCCTATTCCACAGGTA chr4 + 94230402 82694279 82694278 82694483 82694279 82694278 82694483 205 CAGGGCTGTGACAAGCAGTTCTTTAATGCATCTGTTCAGTACTCCAACATGGACCTATTGTTGGACTACATTAACAAGCATTCTGATGAGTTTGGAGTGACTGTCCAGTATGCAACTGTTGGTGATTACTTCCAAGCAGTTTATAGCAGAAATCTTACGTGGGAAATAAGGACTTCTCAAGACTTCCTTCCATATTCAACAGGTA .....x.................:.....x..x..x....x:x............:::..:.....:....:....:x...x...x:...:.:..x..xx.x..x........x..xx.x..:..:.......:x..xx.x:.::x:xxx...x.:..x...x:x:.xx.x:x::x:..x........x..x.....x....... 205M 140/205 68.3% 205/94230402 0.0% 0/205 0.0% -76099748 -18130654 +6453 chr4 + 190214555 6597110 6597109 6597307 198 CAGAACCATTCCAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTGTATGCCGGGGAGTCCATGTTCACACGCTACCTGTGGCCGGCCCCCCGTGGG---CATCTGGACCCCACCTGGGCCCTGCAGCAGCTCCAGCAGCTTCGCTGGGCCGTCTCCGAGGTAA chr4 + 94230402 82697977 82697976 82698174 82697977 82697976 82698174 198 CAGAGCCATTTCAAGCCTGGACTGGATTTTATACTTCTCGGAGCATGTTAAAAGGAGTTGCAAGGAGAGCAAGTTCACTGCTTTATGCTGGAGAGTCCTTTTTCACACAGTATGTCCGGAC-ACACCCAGCAGGTTCTATCTGCAAAC--ACGGAGCCCTAAAGCAGCTTCAGAGCCTTAGATGGGCGGTTTCAGAGGTAA ....:.....:..:........x..x..:..:..x..:..x...x:::.:..:..:x.x..xx..x....x..:x.x:..:.x.....:..:......x.x.......:x..:x.x:..x.-:.x...x.::..---:.....x.xx.--x.x.:.....:x.......:...x:x...x.x.....x..:..x....... 121M1D12M3I11M2D51M 132/195 67.7% 198/94230402 0.0% 6/195 3.1% -76100867 -18129535 +5106 chr4 + 190214555 6598196 6598195 6598317 122 AGGTCCAGCACCATGATGCCATCACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCATCGTCCTAGAT chr4 + 94230402 82698996 82698995 82699117 82698996 82698995 82699117 122 AGGTCCAGCACCATGATGGCATAACAGGCACAGAGTCCCCTAAAGTGACAAACATGTACATGGATAACTTGATGTATGGAATGTTCAACGTCAAGAAGTTAATGGCTTCCATAATCTTTGAT ..................x...x..x..x..x........:..:....x.:........::::xxx..:..::x.xx..:...:.x::.:.xx:x...:.:.....:.....x:..:.x... 122M 83/122 68.0% 122/94230402 0.0% 0/122 0.0% -76100800 -18129602 +3544 chr4 + 190214555 6600640 6600639 6600760 121 CATTTTGCCTCGGTCTACAACCCGCTGGCCTGGACGGTCACCACCATCGTCACCCTGACTGTTGGTTTCCCTGGAGTCCGCGTCACAGATGAGGCGGGCCACCCAGTGCCCTCGCAGGTAT chr4 + 94230402 82700085 82700084 82700205 82700085 82700084 82700205 121 CATTATGTCATTGTCTATAATCCCCTGGCCTGGAACATCACTACAATTGTCACAGTCCCTGTCAACATCTCATCAATGAGTGTTTATGATGAACTGGGACATTCTGTACCAGCACAGGTAT ....x..:.x:x.....:..:..x..........xx:....:..x..:.....xx.xx....::::x..:.xxx.:.xx.:..:xxx.....:x:...x..::.x..:..xx.:....... 121M 75/121 62.0% 121/94230402 0.0% 0/121 0.0% -76099445 -18130957 +3209 chr4 + 190214555 6605004 6605003 6605084 81 AGAAAGTGTGAGAGCTGACAGTTAA-------------CAAGTCTCATCCTGCTGGCCTTGCAGATCCAGAACTCAACAGAGACCCCATCTGCG chr4 + 94230402 66776955 66776954 66777048 66776955 66776954 66777048 94 AGAGACTGTGGGTAATTGCAATTAATTGCTGAGAAATGCAAAGCTGGTGCTGCTGTCCCTGCAGATTCAGAATTCAACACAAGCTCCATCTGTG ...:.x....:.x:x.x:..:....-------------...:x..x:.x......x..:.......:.....:......x.::.:.......:. 25M13I56M 58/81 71.6% 94/94230402 0.0% 13/81 16.0% -60171951 -34058451 +10936 chr4 + 190214555 6609084 6609083 6610056 973 TCTTCTCTCTCCTGCCTCTGCAGACAGAGTAACCGAACGGTGCGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAAACAGGGCCCCATTTCCGATAACTACCTGTTCACACCGGGCAAGGCCGCGGTGCCTGCGTGGGAAGCTGTGGAAATGGAGATTGTGGCGGGACAGCTTGTGACTGAGATCCGGCAGTACTTCTACAGGTGCTTCCCCTGGGGTGACCCCCACAGCCCGGCACACAGTCAGCGCACGCGTGCAGGCAGCTCAGTGAATGAGGGTCTGTCTTTGCTCTGAACCCCAGCTTCCGGGCCGTGGTTGACACGTGGTCTGATGAAGAAATGAATTGCTCTGGTGTCTGCATGCTGGCTGCGTTTGCGTGTGCTGTGTCACGTTGGTTGGGAGCTAAGTTCAGAGCTGGGAGAGAGACCCACAGACCCTGGGGCCCACAGAGCACCTGTTCTTCCATGATCAGAGCAGACGTAAGGCAGGCCCGGCATGGCAGCCCTGCGGTGTCGGGGAACCAGGCTGCTCCCAGCCGCTCGGGGTCCTGGGTGGTGCTATTGTCCACATGGCCCAAGAAGGCTCCCTGCCTTTCGGCGTACCCTGCCCTGCCCACCCTGCCCACATGAAGGAAGGGAAGCAAAAAGGAAGCATCTAGAAGGTTCCTGGAGCTTCACTTACTGATGCTCCCTTCTCCTCCAGGAACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGAGCTGAACCGTGAGGCTGTCCTGAGGACCAGCACCAACCTAAACAGCCAGCAGGTCATCTACTCAGACAACAACGGCTACCAGATGCAGCGGAGGCCCTACGTTTCCTATGTGAACAACAGCATCGCCCGGGTATGT chr4 + 94230402 82703723 82703722 82704477 82703723 82703722 82704477 755 TTTTCCCTCTCCGG--TTCACAGGGAGACTAACCAGACTGTCCAGGTGACCCAGGAGTTCCTCGAGTACCACGTGAACGGAGATGTTACAAAAGGACCCATTTCAGACAACTACTTATTTGCCCCTAATTCTTCTGCTGTTCCAGTATCACAAGCGGTTGGACTGGAAGTGGTGTCTGGAAACTTAGTGACAGAGATACGGCAATACTTCTTCAGGTGCAGCT----------CCATTACAGCTTTAC------TTCACTTGAATGTGTAGTC--CTCTGTTGATGTATGTGAGTCGTT-CTGTGCAGCTCCTCTTCCACACAGTGGAGTTCTTGTACTCTGAAG-------------------------------------GTTT--------------------------------------------------------CAGAC---GAGAACTAACGAGCATCTGCT----------------AAGCATAATGC--------TAAGGAAGCACTTCCTTTTAGA-----TAAGTCGC-----ATCACTCAGGGAGGGAGGTGAAG--ATTGTTCAGAGTTACCATA--------------------GTAGTCTGCttt-------------------------------ataatgtaattatatataa--------------taattaataatCCTTCATGTTTTTACAGCAATGTTACTGCTCAGTATTACACACATGCAGTATTTACAAGGATGTATTCAGTACCAGAAGGCTATGATGCGAAGTTGCTTTGTCATAGGATAGAGCAAGAATACAGTATTGGACCTTTGGAAGTAAATCGTGAGGCAGTTCTAAGAACAAGCACAAATTTGAACACTGGGCAGCTGCTCTACACTGATGACAATGGATTTCAGATTCAGAAGAGACCATTCAAGGCATATGTGAATAATACAGCAGCGCGGGTAGGT .:...:......x.--.:::...:x...x.....::..x..x.:x...........:.....x...........x.....:.....x.x.x.:..x........x..:......:.:..::.x..x:::xxxx.:..x..x..x.::.x:x....x..x.:.x....::.x...x.x...x.x:.x.....x.....x.....:.......x.......xx.:----------..x::.....::x:.------.:x:.x::x::...:..x.--...x..x:...x:x..xx...x..-..x..x.x.:.xx.....:x:.x....xxxx.x:..:x.....x.-------------------------------------....--------------------------------------------------------.....---.:.:x.:.xx.....:...:.----------------.::.:...x..--------:.x..x...x..x.xx.x.x.:-----:.:.::..-----::.:...:...xxxx:....:x.--.....:..x.xxxx...x:--------------------...x:....::.-------------------------------.x..x.x..x:..x..x..--------------:.x...x.:..x..:.x.x:.::.x...x..::.x..x..x...x.......::.....:.x:x:x.xx..x.xxx::xx..:..:x.:...:....:.x.:..:....:..:..:x..........:..:...x:x:::..x..::....:x.:..:........x..:..:..:..x.....x..::.:....x:x:....x.xx.....x.x..::....:..x.x:.....x...x:...:..x.x.:xxx.x........:..:.xx::x..x......x.. 14M2D207M10D15M6D19M2D24M1D45M37D4M56D5M3D21M16D11M8D22M5D8M5D23M2D19M20D12M31D19M14D287M 476/755 63.0% 755/94230402 0.0% 218/755 28.9% -76094639 -18135763 +12380 chr4 + 190214555 6610871 6610870 6611282 412 TGTCTGCAGAATTACTACCCCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTTGCTGTCGGAGCGGGCACATGGCATCTCCAGCCAAGGGAATGGGCAGGTGGAGGTAGGAGGCAC---------GGTCTGTCCT-------ACAGCAGCCCCTCGCGGCCCCCTACAGGCATGCCCAGGTGCAAGCCGGGCCTCTCGGACAATGC--CTTCCCGCAGGTCATGCTCCACCGGCGGCTGTGGAACAACTTCGACTGGGACCTGGGCTACAACCTCACGCTGAACGACACCTCAGTCGTCCACCCAGTGCTCTGGCTTCTGCTGGGATCCTGGTCCCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGAGACCTCGCTGGTAA chr4 + 94230402 82704568 82704567 82704972 82704568 82704567 82704972 405 TGTTTTCAGAACTATTATCCTATGGTCCAGACTGCCTACATTGAAGATGATACCACAAGGCTGGTGCTGCTTGCAGAAAGAGCTCATGGTGTCTCAAGTCAAGGGAACGGACAAGTGGAGGTAACAAATGCAGTTGTGTGGGTTTTTCTTTATTAGGAGAGGATAGCTTTGTGGCTGGTTA-------------------------CTTTTGTGACACTTCTTCTTGACACAGGTGATGCTTCACAGGAGACTATGGAACAATCTTCAGTGGGACCTAAATTACAATCTTACTTTGAATGACTCTTCAGTGGTTCGTCCTGTGTTTTGGCTTATTTTAGGAACAAAGTCTGCCACCAGTGTTTTGTATCGGACAAGTGGCCTAGCATTACAGCACAGGCCAGTTGTAATGTTTGGAACGTTTTCAGGTAA ...:.x.....:..:..:..:.....:...x.x....x...x..:....::.xx.xx.....x...:....xx.:..:x.:..x.....::....x..:........:..:..:.........:x.::::.---------...:.x..:.-------.x..x.xxx.:.:.:...:xx:..-------------------------.:.:.xx....x.x.--...xx.:.....x.....:...x..x.:..:........::.:x.x........::::.....:..:..x:....:...x.:.....x..:.::..x...:.:......x.x:.:...x.xx:...:x:.....x..:::..:::.:..x:..:.xx..:..::.:...........x..x..:x....:...:xx:.:x.x..... 131M9I10M7I24M25D15M2I207M 254/387 65.6% 405/94230402 0.0% 43/387 11.1% -76093697 -18136705 +3486 chr4 + 190214555 6613723 6613722 6613825 103 GGAAGGGAACGGAAGGGAGGGGACGGGAGGGAAAAGAAAAGAAGAGAGGGAGGGAAGGAAGGAAAGAAGGAAGAA-----AGGAAGAGGGAGGAGGAAGGAAGGAAGG chr4 + 94230402 1225213 1225212 1225320 1225213 1225212 1225320 108 GAAAGAGGACTGAGAGCAAAGGTGGGAAGGCAGAAAAAAAGAAGTGGTTGTGGGAAGGAACAAAAGAAGGAAATGAGCCCAGGCAGCTGCACGGGGAGGGGAGGATGG .:...:.:..x..::.x.::..xx..:...x.:..:........x.:xx.x.........x:..........:x:-----...x..xx.x.x.:...:..:....x.. 75M5I28M 69/103 67.0% 108/94230402 0.0% 5/103 4.9% 5388510 NA +6021 chr4 + 190214555 6617367 6617366 6617497 131 TCTGTCCCCAAAGGCCATCGAGGGGAAGCCCAGGCTGACCTCCGCCGTGTCCTGCTGCGGCTCTACCACCTATATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTGGAGGTGAA chr4 + 94230402 82706116 82706115 82706246 82706116 82706115 82706246 131 TTTTTTCCTAAAGGTAAACAGAAGCAAGGTGATGCAGACTTCAGTCGTGTCCTGCTGAGAATTAGACATCTGTATGAAGTTGGAGAGGATCCTGTGCTGTCTCAGCCTGTGATGGTGAATCTGAAGGTAAA .:.x.:..:.....:x.x.::::.x...x:x.x..x...:..x.:............x.:x.:x:x..:..:........x..x.....:..x..x...........x....::.........:....:.. 131M 92/131 70.2% 131/94230402 0.0% 0/131 0.0% -76088749 -18141653 +5215 chr4 + 190214555 6619910 6619909 6620029 120 TGCTCCTCTCCCTGCAGGCTGTGCTGCAGGCGCTGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCGCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAGGACGGGGC chr4 + 94230402 82706770 82706769 82706889 82706770 82706769 82706889 120 TGACTCTTTACTCGCAGAGTTTGCTGAAAGAACTGGGATCAGTGAAGTTAGTGGAAGAGCGATCACTCACAGGCACCTGGGATGTGAACACTTTGAAGCGGTGGAAGTGGAAGACTGTGC ..x::..:.x.::....:x.x.....x.:.x:.....:..x...:x.x:......:.....x..:........x.........x...:..:x:..x.x..x....:x....:...x.x.. 120M 83/120 69.2% 120/94230402 0.0% 0/120 0.0% -76086860 -18143542 +3031 chr4 + 190214555 6624206 6624205 6624269 64 GCTCAAGCCACTGTGAATGGCCTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 50427831 50427830 50427894 50427831 50427830 50427894 64 GCTTAAACTTCAGTGAAAGGAATGTCACTTGGTTTTTTTGTTTGTTTTTTTGGTTTTTTTTTTT ...:..:.:x.x.....x..xx...:x:...x.x..x..............xx........... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -43803625 -50426777 +3571 chr4 + 190214555 6624210 6624209 6624273 64 AAGCCACTGTGA-------ATGGCCTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 22617860 22617859 22617930 22617860 22617859 22617930 71 AAAATACTGTGACAAAGGTGTGCTCTGTTTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTTTTT ..:x:.......-------:..x:.............:.:.....x:.......::............... 12M7I52M 52/64 81.2% 71/94230402 0.0% 7/64 10.9% -15993650 -78236752 +3080 chr4 + 190214555 6624216 6624215 6624272 57 CTGTGAATGGCCTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42595709 42595708 42595765 42595709 42595708 42595765 57 CTGTCAATACTCTGGATTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT ....x...:x:...xx....x...........xx.x::................... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -35971493 -58258909 +3168 chr4 + 190214555 6624224 6624223 6624268 45 GGCCTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 77610503 77610502 77610547 77610503 77610502 77610547 45 GGTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCATTT ..::.x..........................x.......:x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -70986279 -23244123 +3212 chr4 + 190214555 6624227 6624226 6624269 43 CTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 78106178 78106177 78106220 78106178 78106177 78106220 43 CTGTTTTTTGTTGTTGTTGTTTGTTTTTATTTTACTTTATTTT ............................x....x:...x.... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -71481951 -22748451 +3005 chr4 + 190214555 6624228 6624227 6624274 47 TGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7580992 7580991 7581038 7580992 7580991 7581038 47 TGTTTTTTGTTGTTGTTGTTTGTTTGAGTTTTATTTTTTCCCTTTCT .........................xxx....x......:::...:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -956764 -93273638 +3035 chr4 + 190214555 6624230 6624229 6624287 58 TTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAACCACC chr4 + 94230402 32184181 32184180 32184235 32184181 32184180 32184235 55 TTCTTTGTTGTTGTTGTTTGCTTTTGTTTGTTTGTTTCTTCTTTCT---AAAATCACC ..:.................:....x...x...x...:..:...:.---x...:.... 46M3D9M 45/55 81.8% 55/94230402 0.0% 3/55 5.5% -25559951 -68670451 +3011 chr4 + 190214555 6624230 6624229 6624269 40 TTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42595726 42595725 42595765 42595726 42595725 42595765 40 TTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT ................:.xx:................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -35971496 -58258906 +3196 chr4 + 190214555 6624230 6624229 6624281 52 TTTTTTGTTGTTGTTGTTTGT-TTTTTTTTTTTTTTTTTTTTTTTTTTTACAA chr4 + 94230402 6181193 6181192 6181245 6181193 6181192 6181245 53 TTTGTTGTTGTTGTTGTCTATATTTTCTTGCTTTTTTTTTTTTTCTTTTATAA ...x.............:.:.-....:..x:.............:.....:.. 21M1I31M 44/52 84.6% 53/94230402 0.0% 1/52 1.9% 443037 NA +3547 chr4 + 190214555 6624654 6624653 6624723 70 CATGGTGGTGGGCACCTGTAATCCCAGCTACCCGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x....:.:........::.::........x.xx.x...x.x.............. 10M2D58M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -69408543 -24821859 +3367 chr4 + 190214555 6630222 6630221 6630345 124 TCTTATATATAGCACATACCTTGATTTTAGGTTCTTTTTGTTTGTTTTTTTCGT---GTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGTCCAGGCTGG-----AGTGCAGTGGCACCA chr4 + 94230402 69600807 69600806 69600927 69600807 69600806 69600927 121 TCTGCCATGTTGCAAAACCTCTGATTTTGTGTTTTTTTTGTTTGTTTGTTCCGTTTGGTTTTTTTTTTCCCTGCATTTGTTATATTGA-----------TTTTCCACGCTAGGTGGCAGTGCATTAGCACTA ...xx:..:.x...x.xx.::.......:x...:.............x..:...---...........:::.x:x...x.x.x.:x..-----------..x....x...:.-----......x.:....:. 54M3I31M11D13M5I15M 81/113 71.7% 121/94230402 0.0% 19/113 16.8% -62970585 -31259817 +3047 chr4 + 190214555 6630260 6630259 6630303 44 TGTTTGTTTTTTTCGTGTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 + 94230402 48401957 48401956 48402000 48401957 48401956 48402000 44 TGTTTGCTTTGTTCATGTTTCTTTTTTTTTTTTTTCTGTGGGAC ......:...x...:.....:..............:.x..:... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -41771697 -52458705 +3620 chr4 + 190214555 6652199 6652198 6652268 70 CATGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:.--......:...........::........x.xx.x...x.:.........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -69380998 -24849404 +3491 chr4 + 190214555 6652325 6652324 6652370 46 AAAAAAAAAAAAAAAAAAAAACCACCACCAACAACAAAAACAGTCA chr4 + 94230402 33030046 33030045 33030091 33030046 33030045 33030091 46 AAAAAAGAAAAAAAAAGAAAACCACCACCACCAACAAAAACTATCA ......:.........:.............x..........x:... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% -26377721 -67852681 +3388 chr4 + 190214555 6652326 6652325 6652368 43 AAAAAAAAAAAAAAAAAAAACCACCACCAACAACAAAAACAGT chr4 + 94230402 71345089 71345088 71345131 71345089 71345088 71345131 43 AAAACAAACAAACAAAAAAACCACCACCAACAACAAAAACAGT ....x...x...x.............................. 43M 40/43 93.0% 43/94230402 0.0% 0/43 0.0% -64692763 -29537639 +3452 chr4 + 190214555 6660616 6660615 6660698 83 GAGGCAGAGGAGGAGGAGGAGAAGGAGGAGGCGGAGGAGGAGTAGGCAGAGGAGGAGGAGGAGAAAGAAGAAGAAGGAGGAGA chr4 + 94230402 87436489 87436488 87436567 87436489 87436488 87436567 79 GAGCTAGAGGGGTGGGGGG----GGAGGAGGGAGAGCACGGGCAGGCCGGTGAGGATGATGAGAAGGAAGAAGGAGCAGCAGA ...x:.....:.x:..:..----........x:...x.x.:.:....x.:x.....x..x.....:.......:..x..x... 19M4D60M 58/79 73.4% 79/94230402 0.0% 4/79 5.1% -80775873 -13454529 +3097 chr4 + 190214555 6678026 6678025 6678073 48 AACTGTCGTGATGGGGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTTG chr4 + 94230402 81391623 81391622 81391670 81391623 81391622 81391670 48 AACTATCTTGATGGGTTTTTTTTTGGTTTTTTTGTTGTTTTTTTTTTG ....:..x.......x.........x..x.......x.x......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -74713597 -19516805 +3025 chr4 + 190214555 6682465 6682464 6682525 61 ACCTGGGCAACAGAGTGAGACTCTGTCAAAAAAAAAAAAAAGAAAAAAAAAAAAGGAAATT chr4 + 94230402 44082650 44082649 44082710 44082650 44082649 44082710 61 ACCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAACT ...x.x...:x..:...:.x:..............x...x.:.x....x.....::...:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -37400185 -56830217 +3561 chr4 + 190214555 6691347 6691346 6691420 74 GCGCCCCTGTAGTCCCAGCTACTGGAGAGGCTGAGGTGAGAGGATCACTTAAGCCCAGGAGTTGGAGGCTATAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..x.x......:.........x..:........x:xx.x.:.x.....:.:.....:..:.xx:....:... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -69341857 -24888545 +3210 chr4 + 190214555 6692039 6692038 6692118 80 ATATGTGTGTGTATATCTATATATATATGTGTGTGTATATACATATGTGTGTGTGTATATATGTGTGTGTGTATATATGT chr4 + 94230402 89812975 89812974 89813054 89812975 89812974 89813054 80 ATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGT ...x:.:............x..::x.xx:.:::...::.x..x:x::..:..:...x:x.:................... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -83120936 -11109466 +3071 chr4 + 190214555 6692058 6692057 6692120 63 TATATATATGTGTGTGTATATACATATGTGTGTGTGTATATATGTGTGTGTGTATATATGTGT chr4 + 94230402 76709592 76709591 76709654 76709592 76709591 76709654 63 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..........::.....x......x:::.x::::.....:.:.:.x.....x.......x... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -70017534 -24212868 +3026 chr4 + 190214555 6692065 6692064 6692133 69 ATGTGTGTGTATATACATATGTGTGTGTGTATATATGTGTGTGTGTATATATGTGTGTATACATATATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.:...::.::::.x:.:.:...x......:...:......:....:..x...:.::.:x.:.... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% -79941858 -14288544 +3007 chr4 + 190214555 6692068 6692067 6692133 66 TGTGTGTATATACATATGTGTGTGTGTATATATGTGTGTGTGTATATATGTGTGTATACATATATG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:..:.:xx.::...:::x..x::x..x................:.:.....:::.......... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -20633424 -73596978 +3412 chr4 + 190214555 6692081 6692080 6692148 68 ATATGTGTGTGTGTATATATGTGTGTGTGTATATATGTGTGTATACATATATGTGTATATATGTGTAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:x.:...:...::..x:.:.:...x......:...:....:..:...:..x.....::..x..... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -79941842 -14288560 +3037 chr4 + 190214555 6692082 6692081 6692132 51 TATGTGTGTGTGTATATATGTGTGTGTGTATATATGTGTGTATACATATAT chr4 + 94230402 65759986 65759985 65760036 65759986 65759985 65760036 51 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x:.x....x....:..........::..:..:.x.............:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -59067904 -35162498 +3204 chr4 + 190214555 6692085 6692084 6692146 62 GTGTGTGTGTATATATGTGTGTGTGTATATATGTGTGTATACATATATGTGTATATATGTGT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:...:...x:...:...x...:..:..::.........:.:..x...:.::..x...:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -79941844 -14288558 +3069 chr4 + 190214555 6692093 6692092 6692158 66 GTATATATGTGTGTGTGTATATATGTGTGTATACATATATGTGTATATATGTGTATATATATGTGT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ..:.:.:......::...:.:.:xx...:........:.:....::.:.:.::x.:....x..... 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -72573426 -21656976 +3139 chr4 + 190214555 6692096 6692095 6692147 52 TATATGTGTGTGTGTATATATGTGTGTATACATATATGTGTATATATGTGTA chr4 + 94230402 65759986 65759985 65760037 65759986 65759985 65760037 52 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ..x..x....x..:.:...:......:......:.x........:..:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -59067890 -35162512 +3095 chr4 + 190214555 6699941 6699940 6699984 44 TAGGGTTTGTTGTTGTTGTTGTTTTTTGTTTTTTGTTTTTTTGA chr4 + 94230402 18999248 18999247 18999291 18999248 18999247 18999291 44 TAGGGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTTCTCTGA ........x..............:...x......x...:.:... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -12299307 -81931095 +3158 chr4 + 190214555 6721823 6721822 6721891 69 GTGGTGGCCCACACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTCGAACCTAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......::..........::........x.xx.x...x::..:.....:..:.. 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% -69311378 -24919024 +3557 chr4 + 190214555 6727551 6727550 6727795 245 GCCGGGCCTTTGCACGAGCTGTTCCTCTGATCTTCC-TGGGGTGGCCTCCTCCTCGTTCCCCCACTCCCCTCCTCCCCTTCCCCCTCCTCCTCCCCCTCCTTCTCCTCCCCTCCCCCTCCTCCCCCTCTCCTGTCCTCCTCCCCTTCCTTCCCCCACCCATCCTCCCCCTCCCCTCCCCTTCCTCCCCGTCCACCTCCCCTGCCCCTCCTCCCCATCTCCTGTCCCTCCTCCCCCTCCTGTCCCCT chr4 + 94230402 2378750 2378749 2378976 2378750 2378749 2378976 227 GCCAGGTCCTCATGCCCCTTGTCCCCATTCCCTGCCATCCGATGCCCACATCCTTGTGCCCC-ACTGCCCCCATCCCCTTCCACACTCACGCCCCATTCTCTGCCACCTCCATGCCCACATCCTCCCGTCCCATTGTC--CCTGTTCCCAGCGCCA-CAACCCCGTGCCTCCTCCCCACTAC-------TGCGTCTCGCTAACCCCATC-------CTCATGCCCCTCACCCCACT-CTGTCCCCT ...:..:.:.::::.xxx:...:..:x.xx:..x..-.xx.:..x..x.x....:..x....-...x...:.x.........x.x::.x.x:...x:..::.x:.x:.:..x:x...x.x...:..:x...::.:x..--..:x....:xx.x...-.x.:..:x:x.....:.:..x..x.-------.x.::...x.:x:....x:.-------...x..:.....x:...x..-......... 36M1I25M1D75M2D16M1D25M7D20M7D20M1D9M 139/226 61.5% 227/94230402 0.0% 20/226 8.8% 4348801 NA +3035 chr4 + 190214555 6727632 6727631 6727699 68 CCCTCCTCCTCCCCCTCCTTCTCCTCCCCTCCCCCTCCTCCCCCTCTCCTGTCCTCCTCCCCTTCCTT chr4 + 94230402 58593441 58593440 58593508 58593441 58593440 58593508 68 CTTTTCTTTTCCCACACTTTCTCATCCCATTCCCCTCATCTCCCTTTTTTTTTTTCCCCCATTCCCTT .::.:..::....x.x.:.....x....x.:......x..:....:.::.x.::...:..x:.:.... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -51865809 -42364593 +3591 chr4 + 190214555 6730130 6730129 6730199 70 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGGTGAGGCATGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.........:--......:.........:.::...x....x.x..x...x.:........::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -69303067 -24927335 +3013 chr4 + 190214555 6732093 6732092 6732154 62 GTGGGATCTCTTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTCTTTTTTTTTAGATGGAGT chr4 + 94230402 51227407 51227406 51227468 51227407 51227406 51227468 62 GTGGAGGTCCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTTTAGAAGAAAT ....::x::..:..:.::::..::......:....:....:..:...:........x.:.:. 62M 41/62 66.1% 62/94230402 0.0% 0/62 0.0% -44495314 -49735088 +3058 chr4 + 190214555 6736313 6736312 6736371 59 GCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........:.........x.xx.x...xx::x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -69296893 -24933509 +3066 chr4 + 190214555 6743486 6743485 6743550 65 TCCTTCTCCTCTTCC------------TCCTCTCCTCCTCCCCCTCCCCCTTCTTCTTTTTCTTCCTCCTCCTCCTC chr4 + 94230402 68929821 68929820 68929897 68929821 68929820 68929897 77 TTCATCCCTTCTTCCACGGGGTTATTTCCCATTTACCCCCTCCCTCCCCCCCCTTTTTTTTCTTCTTCCTCTTCCTC .:.x..:.:......------------:..x:.:x:..:.:.........::...:.........:.....:..... 15M12I50M 48/65 73.8% 77/94230402 0.0% 12/65 18.5% -62186335 -32044067 +3325 chr4 + 190214555 6743489 6743488 6743537 49 TTCTCCTCTTCCTCCTCTCCTCCTCCCCCTCCCCCTTCTTCTTTTTCTT chr4 + 94230402 34367001 34367000 34367049 34367001 34367000 34367049 49 TTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCTT ..:.x:....:.....::.....:...........::...:........ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -27623512 -66606890 +3137 chr4 + 190214555 6743497 6743496 6743542 46 TTCCTCCTCTCCTCCTCCCCCTCCCCCTTCTTCTTTTTCTTCCTCC chr4 + 94230402 21144945 21144944 21144990 21144945 21144944 21144990 46 TTTCTTTTCTCCTCTTCCCCCTCCCCCTTTTTTTTCCCCTTCCTTC ..:..::.......:..............:..:..:::......:. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% -14401448 -79828954 +3503 chr4 + 190214555 6743524 6743523 6743602 79 TTCTTCTTTTTCTTCCTCCTCCTCCTCCTCCTCTTTCTTCTTCTTTGTCCTCCTCCTCCTCCTCTTCTCCTTCTCTTTC chr4 + 94230402 18131251 18131250 18131329 18131251 18131250 18131329 79 TTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTATC .......:..:..x.......xxx....:...:.:.::.::x..::x...:.xx..::.x.........:......x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -11387727 -82842675 +3114 chr4 + 190214555 6745889 6745888 6745937 49 TTAAAAAAGAAACAAAAAATAAAACAACAACAACAACAAAAACCCGAAA chr4 + 94230402 81964192 81964191 81964237 81964192 81964191 81964237 46 TTAAAAAAAAATCAAA---CAAAACAACAACAACAACAAAAACCCTAAA ........:..x....---:.........................x... 16M3D30M 42/46 91.3% 46/94230402 0.0% 3/46 6.5% -75218303 -19012099 +3022 chr4 + 190214555 6745899 6745898 6745944 46 AACAAAAAATAAAACAACAACAACAACAAAAACCCGAAAAGCAAAA chr4 + 94230402 58310153 58310152 58310198 58310153 58310152 58310198 46 AACGGGAGAAAAAACAACAACAACAACAAAAAACTGAAAAGGAAAA ...:::.:.x......................x.:......x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -51564254 -42666148 +3681 chr4 + 190214555 6759425 6759424 6759488 64 AATATGATTCATATATATATATATATATATATATATTTTTTTTTTTTTTTTT---TTTTTTTTTTTG chr4 + 94230402 21332732 21332731 21332798 21332732 21332731 21332798 67 AATATGAGATTTATATATATATACACACATATATATTATTTTCTTATTTTTTAtgtttttttttttg .......xx:x............:.:.:.........x....:..x......---............ 52M3I12M 54/64 84.4% 67/94230402 0.0% 3/64 4.7% -14573307 -79657095 +3017 chr4 + 190214555 6759439 6759438 6759477 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -18033187 -76197215 +3049 chr4 + 190214555 6764093 6764092 6764150 58 AAACAAACAAACACAACAACAACAACAACAACCCAGAAACGGCCGAAAACAAATCTAT chr4 + 94230402 14795272 14795271 14795329 14795272 14795271 14795329 58 AAACAAACAACTACAACAACAACAACAAAAACCCCATACAAGTTAGGAATAAATCTAT ..........x:................x.....x:x.xx:.:::::..:........ 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -8031179 -86199223 +4208 chr4 + 190214555 6772256 6772255 6772361 106 GCGAGAGCTGGGTTCAAATCCTGCCTCTGCTGCTTACTTGATCTGTGACCTTGGGCAACTCACCGGTCTCTTTCAGAGCCTCAGTTTCCTCATCTGACAAAGGGGG chr4 + 94230402 13242431 13242430 13242535 13242431 13242430 13242535 105 GCAAGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTC-ACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGG ..:...x:..:.x..x:x...::x......::..x...:-.:................x....xx:x.:::.::.:x............:......xx...x:... 39M1D66M 72/105 68.6% 105/94230402 0.0% 1/105 1.0% -6470175 -87760227 +3030 chr4 + 190214555 6777300 6777299 6777362 63 GTGGCACACTTATAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAAGATTACTCGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....::...x.:....:.........:x::........x.xx.x::.x:...:........:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -69255901 -24974501 +3571 chr4 + 190214555 6787041 6787040 6787123 83 CATGGTGGAGCACGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCTCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....x.....--.:....:...........::........x.xxxx...x.x.........:.:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -69246156 -24984246 +3051 chr4 + 190214555 6788934 6788933 6788994 61 TGTGTGTGT-AAAGAAAAAAATCTCATTTTCTTTCTTTTTTTTTTATTTTTATTTTGAGACA chr4 + 94230402 62045308 62045307 62045369 62045308 62045307 62045369 62 TGTGTACGCCAAAGGAAAAAATGTTTTTATCTTTCTTTTTTTTTTTTTTTCATTTGAACACA .....::.:-....:.......x.:x..x................x....:....x:.x... 9M1I52M 48/61 78.7% 62/94230402 0.0% 1/61 1.6% -55256374 -38974028 +3375 chr4 + 190214555 6799981 6799980 6800104 124 CTCCGCCTTGCTGGCTTTTGTTTTGCATATACTCTGTTTTCTTTTTCTTTCT---TTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCCCGGT chr4 + 94230402 81090975 81090974 81091097 81090975 81090974 81091097 123 CTCCTTGTTGCTGAATTACTTTCTGCAAATGCTCTGGTTTCTTTGTTTGTTTATGTTTTCTCTTTGTGTATTTCTTCGTTTTGCTTTGTTTTTCCCTTA----GGGATTCTACTTTTTCATATCAGT ....x:x......:x..x:x..:....x..:.....x.......x.:.x.:.---..:.:.....x.x.x...:..:x....x:...x.....:::..:----..::.:::...:.x..::x:.:.. 52M3I44M4D24M 77/120 64.2% 123/94230402 0.0% 7/120 5.8% -74290994 -19939408 +3164 chr4 + 190214555 6800551 6800550 6800623 73 TGCACCTGTAATCCCAGCTACGCAGGAGGCTGATGCAGGAGAATCACTTTAACCCAGGAGGTGGAGGTTGTGG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:........x::::.......xx.xx.x...x.....x.......:..x.xx:..:...:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -69232654 -24997748 +3260 chr4 + 190214555 6807937 6807936 6807997 61 GTGCACCTGTAGTCCCAGCTACTCGGGTGGCTGAGGCAGGAGAATCCCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.........:.::x.......x.xx.x...x.x........::.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -69225267 -25005135 +3447 chr4 + 190214555 6821624 6821623 6821726 103 ATATATACGTGTATATAGATACGTGTATATACGTGTATGTGTATACATATATACATGTATATATGTGTGTGTGTGTGTGTGTATATATATATATGTATATACA chr4 + 94230402 32744950 32744949 32745042 32744950 32744949 32745042 93 ATGTACACCTATCTATCTATACATCTACAGA---------ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT-TCTGTAGATGCA ..:..:..x.:.x...xx....:.x..:.x.---------:....x...:......::.:.:.x.....::.......:.....:.....-.x....x..:.. 31M9D50M1D12M 67/93 72.0% 93/94230402 0.0% 10/93 10.8% -25923326 -68307076 +3342 chr4 + 190214555 6821652 6821651 6821725 74 ATACGTGTATGTGTATACATATATACATGTATATATGTGTGTGTGTGTGTGTGTATATATATATATGTATATAC chr4 + 94230402 43288468 43288467 43288540 43288468 43288467 43288540 73 ATACGTATGTATTCA-AAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGAC ......:.:.:.x:.-.x...............x...::.:.:.....x....:.......x.x..x..x.x.. 15M1D58M 55/73 75.3% 73/94230402 0.0% 1/73 1.4% -36466816 -57763586 +3245 chr4 + 190214555 6821654 6821653 6821726 73 ACGTGTATGTGTATACATATATACATGTATATATGTGTGTGTGTGTGTGTGTATATATATATATGTATATACA chr4 + 94230402 27325491 27325490 27325563 27325491 27325490 27325563 73 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .:.:.....xx.:..:.:.:x.:x.:x..x..............:.......:..::..:....:.:x.x... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -20503837 -73726565 +3032 chr4 + 190214555 6821657 6821656 6821724 68 TGTATGTGTATACATATATACATGTATATATGTGTGTGTGTGTGTGTGTATATATATATATGTATATA chr4 + 94230402 21429683 21429682 21429750 21429683 21429682 21429750 68 TGGATGCTTAATCATATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACA ..x...:x..xx......x..:.x.x.x.xx..x.:.:.:........................x.:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -14608026 -79622376 +40269 chr4 + 190214555 6824162 6824161 6824729 568 TTTTTCCTCTCTCATTTTTGTAGGTTCTGCCGGAGACTTCCATTTGGCCTCAATGTGAAATTAAAGTAGAAAATCACATCTACATGCATGTT-GCTATCAGGAT---GTTGATTCATTAGTCATGCCTGAAGAGGGAAAGTCTGTTTTAGGTGGCTGACTACCAGCAAAAATAAATGCTTATCCTACATGTCAAGCATCTCTACTTTTTACTGGAGTGAAAATCCCCTCCAGATACCAACAGAATATCAACTGCAGAAAATGCTTCACATTTTAAGGATGTCGGCAACCTAAATTCATGTACCCTATCTGTACAGTTGTTGTGGATGGTTTGCCATCTGAAAGCTCCTCAAGTTCTTATCCAGGCCCTGTGTCTGTTTCTGAAATGTCTCTGCTTCATGCTTTGGGTCCAGTGCAGACCTGGCTGGGACAAGAGCTCGAGAAATGTGGCATTGATGCCATGATTTACACTCGGTATGTCCTCAGTCTTCTGCTGCATGACAGCTATGACTACGACCTGCAGGAACAGGTATTTACATATTTTAAGTGTTTTCTG--AAAACTGA---TTGTATCTGT chr4 + 94230402 82779327 82779326 82779903 82779327 82779326 82779903 577 TTATCCTTTTTTCCTCTTTATAGGTCCTGCTGGGGACTTGCATCTGGCCTCAATGTGAAATTAAGGTAGAAAAACACATCTACATATGTGTTTGCTATTAGGATTTAGTTTATTCACTGGTCATGCCTGAAGAGTGATGTTCGTCTCTAGACGGCTAACTGCCAGGAAATATAAATGATTGTCCTAGAAGTCAAGCCTCTCTCCTATTTACTGGAGTGAAAATCACCTCCAGATATCGACGGGATATCAACTACAGAAAATGCTTCACGTTATAAGGATGCCAACCACCTAGATTCATGCGCCCTATCTGTACAGTTGTTGTGGATGGTTTGCCATCAGAAAGCTCCTCAAGCTCTTATCCAGGCCCTGTATCTGTTTCTGAAATGTCTCTGCTACATGCTTTGGGTCCAGTGCAGACCTGGCTGGGACAAGAGCTAGAGAAGTGTGGCATTGATGCCATGATTTATACTCGGTATGTCCTCAGTCTTCTGCTGCATGATAGCTATGACTACGACCTGCAGGAACAGGTATTTACATATTTTAGATGTTGTCCAGTGAAAGTGAGTTTTGTATCAGT ..x.:.:.:.:..x.:...:.....:....:..:.....x...:....................:........x...........:::....-.....:.....---...x.....:.:...............x..x:x..xx:.:...::....:...:....x...x.......x..:.....x.x.......x.....x..x..................x..........:.:..:.:.........:...............:..x........:.::.x.....:.......::....................................x..............:.................:.......................x.........................................x.....:.......................:................................:...........................................::....x..::--:...x...---.......x.. 92M1I11M3I447M2I8M3I10M 494/568 87.0% 577/94230402 0.0% 9/568 1.6% -75955165 -18275237 +3130 chr4 + 190214555 6828232 6828231 6828316 85 GATGCAGTGGGGTTTACCTGTAGTCCCAGCAACTTGGGAAGCTGAGGTAGGAGGATCGCTTGAGCCTGGGGGGTGGAGGCTGCAG chr4 + 94230402 76033193 76033192 76033277 76033193 76033192 76033277 85 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..xx.x...x:..x......:.....x.....::.:......x:xx.x.:.x.:.....:..::.::.x.xx:.....:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -69204961 -25025441 +3155 chr4 + 190214555 6836454 6836453 6836577 124 TCACTTTTTCCTGATTTCTTTGTTTCTCACTCTATTGTGCTTAATAATTGTATTAAGGGTTGTTTGTCCTTTTTCTTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTAGTATTTATTGATCATT chr4 + 94230402 72471324 72471323 72471434 72471324 72471323 72471434 111 TTACTTTTCACTGAAACGTTATTTTTTC----------TCTTACAGATTTTCTTCTGGGTTTCTTGT---TTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATT .:......:x....xx:x..xx...:..----------x....xx:...x.x..xx.....x:....---..x....::.::...................:..xx:x.:..:.x..x...... 28M10D29M3D54M 77/111 69.4% 111/94230402 0.0% 13/111 11.7% -65634870 -28595532 +3153 chr4 + 190214555 6836535 6836534 6836596 62 TTTTTTCTTTTCTTTTTTTTTTTTTTAGTATTTATTGATCATTCTTGGGTGTTTCTCGGAGA chr4 + 94230402 24176793 24176792 24176854 24176793 24176792 24176854 62 TTTTTCAACTTCATTTTTTTTTTTTTACTATTCATTTATTATTCTTAGTTCTTTCTCAATGA .....:xx:...x..............x....:...x..:......:.x.x......::x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -17340258 -76890144 +3063 chr4 + 190214555 6838160 6838159 6838212 53 ACTAGTAAGTATGAGGGTAACAAAGATAGCTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 7819000 7818999 7819052 7819000 7818999 7819052 53 ACTAATAACTTGGGGGGGAAAAAAAAAAGCTTTTTTTTTTTTTTTTTGACACA ....:...x.xx.:...x..x...:.x......................x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -980840 -93249562 +13359 chr4 + 190214555 6842056 6842055 6842236 181 TTTCATTGCAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTATAAGAAATGGGGAAAGAGTAAGAAAAAATGTTCAGATCTAACTCTAGAAGAAATGAAAAAACAGGCTGCTGTCCAGTGTCTTCGATCTGCTTCTGATGAAGTAAGTTTACATTTTGTTTCTAACACTTAAGA chr4 + 94230402 82795613 82795612 82795793 82795613 82795612 82795793 181 TTTGATTTTAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTACAAAAAATGGGGAAAGAGTAAGAAAAAGTGTTCTGATCTAACACTAGAGGAAATGAAAAAACAGGCTGCTGTCCAGTGTCTTCGCTCTGCTTCTGATGAAGTAAGTTCAGATTATTTAATAGATTCTTAAGA ...x...x:........................................:..:.......................:.....x........x.....:...................................x......................:.x...x.x.xx:x:.:x....... 181M 160/181 88.4% 181/94230402 0.0% 0/181 0.0% -75953557 -18276845 +3017 chr4 + 190214555 6844404 6844403 6844452 49 GATTTTTTAACTTCTTAATTTCTTTTTCTTTTTCTTTTCTTTTTTCTTT chr4 + 94230402 52884634 52884633 52884682 52884634 52884633 52884682 49 GAACTTTCTACTTCATAGTTTTTTTTTCTTTTTCTTTTTTCCTTTCTTT ..x:...:x.....x..:...:................:.::....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -46040230 -48190172 +3366 chr4 + 190214555 6849475 6849474 6849545 71 ACGTGGTGGCGCCCACCCATAATCCCAGCTACCTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::....:..--..x::..:.:........:..::........x.xx.x...x.............:.. 12M2D57M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% -69183721 -25046681 +6072 chr4 + 190214555 6855708 6855707 6855916 209 AAGACGTTTAATAAGTGATCCCTAGAGGTTCAGTGTTCTGCATTGCGAGACTAGCCCTAGGTTTAG----------AAACCTAGTG------ACATAGGCTTGCTGTACAGAACAGTATGCAGTGTGTCAGCTGACACTGGTGTTGGTTTCACGAT-CCGAAGGAAATGGAATA--TAATTGCCGTCCTTGTCACACCTTGAGCATTATGGTAAGCAGGTGCTTTCTG chr4 + 94230402 82805356 82805355 82805578 82805356 82805355 82805578 223 AAGAGGTTGAGTAAGTGGTCTCTGGGGAGTTGGCATTCTGCACAGC-----CGTTCGTGGGTTTTTTTTTTCCTTTAAACCTAGCAGTAGCTACATGGGAGTGCTATGCAGGACAGCATGCAGCGTGTCAGCTGACATGAGTATTAGTTTCATGGTACAGGAGGAAATGAAGTGTTTGATTCCAAAAGTTTTCCCTTCTTCGGCGCAATGGTGAGCAGTTTGTTGCTG ....x...x.:......:..:..:.:.:x.::.::.......:x..-----::x:.x.:.....xx----------........::------....:..xx....:.:...:....:......:.............:x:..:..:......:.:.-.x.:........:.:.:--.:...x.x:xxx..x..x.x:...x:..::x.....:.....x.xx..x... 46M5D15M10I10M6I64M1I17M2I52M 138/204 67.6% 223/94230402 0.0% 24/204 11.8% -75949648 -18280754 +6920 chr4 + 190214555 6857141 6857140 6857235 95 TGTGTCTTTTTGTTGTCATGCAGAGCTCTGGTATCGAGACTTTAGTGGAGGAGCTCTGCTCCAGACTGAAAGACCTTCAGAGTAAGCAAGGTGAG chr4 + 94230402 82807552 82807551 82807646 82807552 82807551 82807646 95 TGTTTTTCTGTTTTATTGTGCAGAGCTCTGGGATTGAAACTTTAGTGGAGGAGCTTTGCTCCAAACTGAAAGACCTTCAGAGTAAGCAAGGTAAG ...x.:.:.x.x..:.::.............x..:..:.................:.......:............................:.. 95M 81/95 85.3% 95/94230402 0.0% 0/95 0.0% -75950411 -18279991 +6840 chr4 + 190214555 6858409 6858408 6858513 105 TTTTGTTTCATAACAGAAGAGAAGATTCACAAAAAGTTAGAGGGGTCTCCCTCTCCAGAGGCAGAATTATCCCCTCCAGCAAAGGATCAAGTGGAAATGTATGTA chr4 + 94230402 82808909 82808908 82809013 82808909 82808908 82809013 105 TTTTCTTCCAAAACAGAGGAGAAGATTCACAAAAAGTTAGAAGGCTCATTGTCTCCTGAGGCTGATTTATCTCCCACAGCAAAGGATCAAGTAGAAATGTATGCa ....x..:..x......:.......................:..x..x::x.....x.....x..x.....:..:x................:..........:. 105M 87/105 82.9% 105/94230402 0.0% 0/105 0.0% -75950500 -18279902 +3020 chr4 + 190214555 6859088 6859087 6859161 74 ACTCTGTCTTATTAAAAAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAATGATTATCCATGTTCACAAGCA chr4 + 94230402 76904537 76904536 76904610 76904537 76904536 76904610 74 ACTCTCTCCTATCAATGACAAAAAAAAAAAAAACAACAAACAGACAAAAAAACCATTAATTTTATCCAAATGCA .....x..:...:..x:.x..............x.....:x.::x...:...:x....x::x.:.:..x.x... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -70045449 -24184953 +3124 chr4 + 190214555 6859099 6859098 6859161 63 TTAAAAAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAATGATTATCCATGTTCACAAGCA chr4 + 94230402 58395829 58395828 58395891 58395829 58395828 58395891 63 TTAAAAAAAAGTAGATAAATAAAAGCAGGAGAGAAAAGAAATCAGAAATCATATTCACATACA ..........:x.:.x...x....:..:..:...........x.xx.x:...:......x:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -51536730 -42693672 +3660 chr4 + 190214555 6860234 6860233 6860336 103 TCACAA---CCCTGAGAGGTAAATATT--ACTAGCTCTATTTTGTAGGTGAGGAAACTGAGCTATGGAGAGGTTAAGTAACATGCCTAAGGTCACACAGCTAGTAAAG chr4 + 94230402 82283090 82283089 82283197 82283090 82283089 82283197 108 TCACAAAGTTCCTTCAAGGTTAGCATTGTATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAGG ......---:...xx:....x.::...--.:..xxx::....::..x:..:........:.x:.::.:x..:......:..xx:...............:....:.:. 6M3I18M2I79M 70/103 68.0% 108/94230402 0.0% 5/103 4.9% -75422856 -18807546 +228542 chr4 + 190214555 6860895 6860894 6864197 3303 TTTCAGGTACTATGAAGCATTTCCACCACTTTCTGAGAAACCAGTTTGCCTGCAAGAAATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTCTTACTCTAGCTCTTCTTCATCATCCACAGCCCCACCAGCTAGCACAGATACTTCCTCTCCTAAGGACTGCAACAGTGAAAGTGAAGTCACCAAGGAAAGAAGCAGTGAAGTACCCACCACTGTGCATGAGAAAACCCAG---AGCAAAAGCAAAAACGAGAAGGAAAACAAATTTAGTAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAAGGAAAGATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGCATCCATGAAGTATGTTAAAGTAAGACACAAGGCACGAGAGATTCGAAACAAAAAAGGGCGGAATGGGCAAAGCAGGCTTTCTTTGAAGCACGGTGAAAAGGCTGAAAGGAACATTCATACTGGAAGTAGTAGCAGTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACCTTTAAAAGAAATAGGGAGAAAAGATCCTGGGAGCACTGAAGGAAAAGACCTGTACATGGAGAATAGAAAGGACACAGAGTATAAAGAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGTAAACTAGAGACCACATACCGAAACAGACAGGATACAAGTGATCTGACATCAGAGGCAGTGGAAGAATTGTCTGAATCAGTGCATGGTCTTTGTATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTGTAGAAATGCCTGCAGTTATAAATGAGGATATTGACCTCACTGGGACCTCATTATGTTCTCTACCAGAGGACAATAAATACCTGGATGATATTCATCTATCAGAATTAACGCACTTCTATGAAGTGGATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATGATTCGACAGAAAAGCAAAGAGAACACAGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTATGGAGTTGCAAGGGGAACGTGCAATATGGACAGATTCTACCAGCTCCGTAGGTGCTGAGGGCTTATTCCTGCAGGACCTTGGCAATCTGGCTCAGTTTTGGGAGTGCTGTTCATCC---AGCTCCGGTGATGCTGATGGGGAGAGTTTTGGAGGAGACTCTCCAGTTAGACTCTCTCCCATCTTAGACAGCACAGTGCTCAATTCACACCTGCTTGCTGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCTTGTTTTTCAGTGTTTGAAGTGCAATGCAGTAATTCTGTTTTACCATTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATACAGATTCTAGT------GCTAATATGCTTGGGAAAACACAGTCTAGATTGCTAATATGGACCAAAAATAGTGCCTTTGAAGAAAATGAACACTGTTCTAATCTTTCAACAAGAACTTGTAGTCCATGGTCCCATTCAGAAGAAACACGTTCAGACAATGAAACATTAAATATTCAGTTTGAAGAATCCACACAGTTTAATGCCGAAGATATTAATTATGTAGTTCCTAGAGTCTCGTCAAATTATGTAGATGAAGAACTTCTAGATTTTTTGCAAGATGAAACTTGCCAGCAAAACAGTAGAACTTTAGGTGAGATTCCTACATTAGTTTTCAAAAAAACATCTAAACTAGAATCCGTCTGTGGTATTCAGCTAGAACAAAAAACAGAAAACAAAAATTTTGAAACTACACAAGTATGTAATGAAAG---TCCACATGGAGATGGCTACAGCTCAGGGGTTATTAAAGACATTTGGACAAAGATGGCAGACACAAATTCTGTGGCTACAGTAGAAATAGAAAGAACTGATGCTGAGTTGTTTTCGGCAGATGTAAATAACTACTGCTGCTGTCTAGATGCTGAAGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGCTGTGCGGAGGTCAGAGTACCATCTGTGGGAGGGACAGAAAGAGAGCCTGGAGAAAAGAGCATTTGCTTCTAGTGAGCTATCAAACGTGGATGGTGGTGATTATACAACACCCTCTAAACCCTGGGATGTAGCCCAAGATAAAGAAAACACATTCATTCTTGGAGGAGTTTATGGAGAACTCAAAACCTTCAATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAAGGAAGTCTGTTACAGTGTGCAGCTTCTGATGTTGTGACGATAGCTGGTACAGATGTCTTTATGACCCCAGGAAACAGTTTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTTCGTGTCATTTGAACAGAATGATCAGCCGAAGAGTGGGGAAAATGGGTTAAATAAGGGATTTTCTTTTATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGGACTTGAATACTCATTTTCTTCCTTTGACTTAAGCAATCCATTTTCACAAGTTCTTCATGTAGAATGCTCATTTGAACCTGAAGGGATTGCATCTTTCAGCCCCAGTTTTAAACCGAAATCAATCCTCTGTTCTGATTCAGACAGTGAAGTGTTTCACCCCAGGATATGTGGTGTTGACAGAACACAATACAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGGAGGAGGAAGCGAGTCAGAATTTGAATCTGAGAAAGATGAAGCAAATATTCCCATTCCTTCTCAAGTTGATATATTTGAAGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAGATGCAGAGAAAGAAGGCCATTACTATGGAAAATCAGAGCTTGAGTCTGGAAAATTCCTTCCCAGGTTAAAAAAATCTGGGATGGAAAAGAGTGCTCAGACATCACTGGATTCCCAGGAGGAATCAACTGGGATTCTTTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTAGCATGAATGAATCCCTGGA---AATAGATTTAGAAAGCTCAGAAGCAAATTGTAAAATAATGGCACAATGCGAGGAAGAAATTAATAATTTTTGTGGTTGCAAAGCAGGTTGTCAGTTTCCTGCTTATGAAGATAATCCAGTTTCTTCGGGACAGCTGGAAGAGGTATGTGTCTGCGT chr4 + 94230402 82810362 82810361 82813679 82810362 82810361 82813679 3318 TTTCAGGTACTATGAAGCATTTCCTCCTCTATCTGAAAAGCCAGTTTGCCTGCAGGAAATTATGACTGTATGGAATAAATCCAAAGTATGCTCTTACTCTAGCTCCTCATCTTCATCCACTGCTCCACCAACTAGCACAGATACATCTTCTCCAAAGGACTGCAATAGTGAAAGTGAAGTAACTAAAGACAGAAGTAATAAAGTACCTGCCGCTGTACACGAAAGAACGCAGCAGAAGAAAAGTAAAAATGAGAAAGAAAACAAGTTTAGTAACAATGCTGTTGAAGATAAGCCTGTTTTGTATAAAAAACAAGTCCGACATAAGTCTGAGGGAAAGATGCGTCCTCGCTCCTGGTCATCTGGATCCAGTGAGGCTGGCTCAAGTTCTAGTGGTAATCAAGGTGAATACAAGGCGTCGATGAAATGCATTAAAGTAAGACACAAAACAAGAGAGGTTCGAAATAAAAAAGGGCGTAATGGGCAAAGCAGGCTTGCAGTGAAATCTGGTGAAAAGGCCGATAGAAAAGTCCACAGCGGAAGCAGTAGCAGCAGTAGCAGCGGGTCCGTCAAACAGCTGTGCAAAAGAGGTAAAAGGCCATTAAAAGAAATTGGAAGAAAAGAAGCTGGCGGTAATGATGGAAAAGATTTGTACATAGACAGCAGAAATGAAAAGGAATATAAAGAAGAACCCTTGTGGTATACTGAGCCGATTACAGAGTACTTTGTTCCTCTTAGCAGAAAAAGCAAGCTGGAGACTACATACCGCAACAGAGAAGATATATGTGGCATAACATCAGAGGCTGTAGAAGAGTTGTCTGAATCAGTGCATGGTCTTTGTATTAGCAACAATAATGTTCATAAAACATACCTCGCAGCAGGTACTTTCATCGATGGTCACTTTGTAGAAATGCCTGCAGTTCTAAATGAGGATATTGACCTCGCTGGGACCTCAGTTTGTTCTCAACCAGAGGACGACAAATATTTAGATGATGTTCATCTGTCAGAACTAACACACTTCTATGAAGTGGATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGATATGATGCAAGGGGAGAGTCGGATTTTAAATATGATTCGACAGAAGAGTAAAGAAAAAAATGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGAATGGAGTTGCAAGGGGAAAGTGCAATATGGACAGATTCAACCAGCTCTGTTGGTGCTGAAGGGTGGTTCTTGCAAGACCTTAGTAATTTAGCTCAATTTTGGGAGTGCTGTTCATCTTCTAGTTCTGGCGATGCAGATGGAGAAAGTTTTGGAGGAGATTCTCCTATCAGATTCTCCCCCATCTTAGACAGCACAATGCTTAATTCACATATGCTTGCTGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGGTCTGGTATAAACTCTTGTTTTTCAGTGTTTGAAGTGCAATGCAGTAACTCTGTTTTACCGTTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATGCAGATTCTAGTAGCACTGCTAATATTCTTGGGAAAACACAGTCTAGGTTGCTAATATGGACCAAAAATAGTGCCTTCGATGAAAATGAACACTGTTCCAATCTTTCAACAAGAACTTGTAGTCCATGGTCACACTCAGAAGAAACACGTTCAGACAATGAGACTTTAAATATTCCGTATGAAGAATCCACGCAATTTAATGCAGAAGATATTAATTATGTAGTTCCTAGAGTGTCTTCAGGTTATGTAGATGAAGAAATTCTAGACTTTTTGCCAGAAGAAACCTGCCAGCAACAAGCTAGAACTTTAGGAGAAATGCCCGCTTTGATTTTCAAGAAAAAATCTAAGCTAGAATCTGTCTGTGGTATTCAGCTAGAACAAAAAGCAGAAAGTAAAGACTTTGAAACTACACAGGGGTGTAGTGCAAGCAGTCCACATGGAGATGGCTACAGCTCAGGGGTTATTAAAGATATTTGGACAAATATGCCAGACAGAAATTCTGCAGCAATGTTAGAAATAGAAGGAATAGAAGATGAATTGTTTTCAACTGATGTAAATAACTATTGCTGCTGTTTGGATACAGAAGCAAAAGTTGAAACCCTCCAGGAGCCCAATAAAGCAGTGCAGAGATCAGAGTATCACCTTTGGGAAGGTCAAAAAGAGAATTTAGAGAAGAGAGCGTTTGTCTCAAATGATTTATCAAAAGTAGATGGTGGTGACTATACTACACCGTCGAAACCTTGGGATGTTAACCAAGATAAAGAAAACTCATTTATACTTGGTGGTGTGTATGGGGAGCTGAAAACATTTAATAGTGATGGAGAATGGGCAGTGGTGCCACCTAGTCACTCAAAAGGGAGCTTATTGCAATGTGCAGCTTCTGATGTAGTGACAATTGCTGGTACAGATGTTTTTATGACTCCAGGTAATAGCTTTGCCCCTGGTCATAGGCAATTATGGAGGCCATTTGTATCATTTGAACAGAGCGATCAATCAAAGAGTGGAGATAATGGATTAAATAAGGGTTTTTCTTTTATCTTCCATGAAGACTTACTGGGAGCTTGTGGTAACTTTCAAGTTGAAGAACCAGGGCTTGAATACTCATTCTCTTCCTTTGACCTGAACAATCCATTTTCTCAAGTTCTTCATGTAGAGTGTTCATTTGAGCCAGAAGGAATTGCATCTTTCAGCCCTAGTTTTAAACCTAAGTCAATTCTGTGCTCTGATTCAGACAGTGAGGTTTTACACCCCAGGATATGTGGTGTTGATCGAACGCAATACAGGGCTATAAGGATTTCTCCAAGGACTCACTTTCGCCCAATTTCTGCATCTGAACTTTCTCCAGGTGGTGGAAGTGAGTCAGAATTTGAATCAGAAAAGGATGAGGGAAGTATTGCTGTCCCTTCTCAAGTAGATGTGTTTGAGGATCCACAAGCAGATCTCAAACCTCTGGAAGAAGATGCAGAAAAAGAAGGGCATTATTATGGAAAATCAGAGCTCGAATCTGGAAAATTTCTTCCCAGATTAAAAAAGTCTGGAATGGAGAAGAGTGCACAAACATCATTGGATTCCCAAGAAGAGTCCACTGGGATGTTACCAGTAGGAAACCAAGATCCGTGTTTAGAATGCAGTATGAAAGAATCCCTAGATGGGAGGGTGATGGAGAGCTCTAAAGTAAACTGCAGAATAGTGGAGC--CGCGA-GAGGAGACTAGCAGGTTTTGCAGTTGTAAAGCAGGATGCCATTTCCCCAGTTATGAAGATAATCCTGTTTCTTCAGGAGAGCTTGAAGAGGTACGTGGATGTGT ........................x..x..x.....:..:..............:.....:........:.....:..:..:.....x..:..............:..x..x........x..:......:.............x..:.....x...........:..............x..:..:..x.....:.:.:.......::..:....:..:..:.:...x...---.:x.....:.....:.....:........:........:::::.x:.......x.......:......:.....:...:..........::....:........x..:........x.....x.....x........:..x...........:.....x.....:..x....xx..:..:..x.....:.:::................::..x.....:.......:...........x..................x.xx....::x:...........:..x..:..x:.:..:.x:.....:........:..:.....:..x..:.................:x.:.....:..:..x...........x..:........xx....x:.:.x...x........::.......:..x.::.....x..x.x:..:........:..:...........:..:.....:...:.x..:..:...........x...........:..:..:.....:........x......x.:....:.x...::x.:...........x..:.....:.............................:............x..................................:........:.....................x....................:...........x.x.......x..........:.:.....::.:......:.......:......:....:.....................................................x.::........:..:...........:.................:..:.....:..x.xx...................................x..................x...................x........:..x........:..x.x:...:....:......:.:...:.:.....:....................:---..:..:..:.....x.....:..:..............:.....x:.:...:....:..................:....:........:x...........................................:...............................................:...........:....................................:...........------........x....................:.............................:..x.................:................................x..:..........................:..x..........x..x............:..:........x.............................x..x...::................x.......:.......x...x.....:.........x.x:x............x..:..x..::.x..::.......:....x......:........:...........................:......::...:.:..............:.x:....:..x...---.......................................:...........x...x......x........::..x.::x...........:...:x..x.x...:........::.x..............:.........:.:...:.x.....x:..x.x..:.....:........::....:..x....:...:........:..:..x.....:..x..:.......:::.:.....:.....:....::..x.:...x:.......x..:...........:.....x.....x..x.....:........x:x................x....:..x.....x..x..x.....:..:..x.....x..:...........:..:........x..:............x.......:..::.:..:..:.................x.....:..x..............:........:.....x..:..:.....:.....x..:.....:.......::..x..:..:.............::.....::.:........:..x.....:...........x.............................:...........:...........:.....x..x..:..............:............:.:.:............x.................:..:........:..x.....:.................:...........x..:.....:..x..:.................:..x..x.......................:x....:..............xx....:.....xx............................:.....x..:.....x..x.....:.................x..:..:.....:.x..:....x.::.:...........x...:.:.....:.....:..:...............:................:........x.....:.................:..:...........:........:........:.....:.....:........x..:......:..........:..:..:..x........x:.x:..........x...:...x......:.....:..:.....x........:..---:.x:.xxx.:..:.....x:...:...:..:.:....:...x:.--:....-..:..:.:..::.:x.....::....:........x..:..x..:..::x...............x........:...x....x.........:...xx..:.. 232M3I1044M3I243M6I410M3I1218M3I44M2D5M1D104M 2785/3300 84.4% 3318/94230402 0.0% 21/3300 0.6% -75949467 -18280935 +3446 chr4 + 190214555 6871293 6871292 6871376 84 ACATGGTGGTTCCCGCCTGTAGTCCCAGCTACTTGCAAGGCTGAGGTGGAAGGATCACTTGAGCCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.....x.x..--......:...........x.........x:xx:x.:.x.......:...x.:..x.xx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -69161903 -25068499 +8304 chr4 + 190214555 6871565 6871564 6871689 125 TCTAAACAGTTCCCTGTATTGAACACTGATATACAAGGAATGAATAGAAGTCAAGAAAAACAGACCTGGTGGGAAAAAGCCTTGTACTCTCCTCTTTTTCCTGCATCAGAGTGTGAAGGTAAGGA chr4 + 94230402 82823033 82823032 82823157 82823033 82823032 82823157 125 TCTAAACAGTTTCCTGTATTGAATACTGATCTGCAGAGAATGAGTGGCAGCCAGGAAAAGCAGTGCTGGTGGGAAAAGGCGCTCTATTCTCCCCTTTTTCCTGCGTCACAGTGTGAAGGTAAGAA ...........:...........:......x.:..::......:.:.x..:..:.....:...xx............:..x:.x..:.....:...........:...x..............:. 125M 102/125 81.6% 125/94230402 0.0% 0/125 0.0% -75951468 -18278934 +7027 chr4 + 190214555 6876616 6876615 6876763 148 TTCCCCCTTTCCCTCTTTTCCCTTCT--CCATTCCAAATGA---TTAAGAATGTTACACAAATGCCAAGGGAGAGAGTGGTTTAGAAGAATATCCAGATGCTAAAGAGACACCCAGTAATGAAGAGCGCCTGTTAGATTTTAATAGGGTAAGT chr4 + 94230402 82825087 82825086 82825239 82825087 82825086 82825239 153 TTTTTTTTTTCCTTCCTTTTTCCTCTGACCACTCCCCGCCCACCCTAAGAGTGTTATACAAATGCCAAGGGAGAGAATGGTGTGGGAGAATTTGCAGATGTAAAGGAAATACCCAATGATGATGAACATCTTTTAGATTTTAACATGGTAAGT ..:::::.....:..:...::.:...--...:...xx::xx---:.....:.....:...................:....x.:.:.....x.x......:x..:..:.:.....:.:....x..:.::..x...........:.x....... 26M2I13M3I109M 108/148 73.0% 153/94230402 0.0% 5/148 3.4% -75948471 -18281931 +82910 chr4 + 190214555 6880774 6880773 6883377 2604 GTTTTAATCT-TAGGTGTCTTCTGTTTATGAAGCAAGATGTACAGGAGAGAGAGATTCTGGAGCAAAGTCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAGGCTCAGAAGGCGGAGGCGAGTGGGTGGGCCCTAGTGAAGAGGAGCTCTTTTCTCGAACTCATCTCT-AAACCTGCAAAATAGTACAAATTATTGTTTAAAAATGATATGTGATGGAAAATTACTCTTCAGTGAGACCTGTTAATCTAAAACAACAACTTAGGTTTCCTCTTCAATTAACTGATTCAGATTGGTAATAATTATCTTTCTCTTCTTGCTTATTTTAGAGTTGAGG--ACAGCTATCCTGTTAAAGATTTTTTT----TCCCAGCTGTTAAATTCTTGGCTATTTGAAATAGACTAGATTGTGTTGTCAAATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGC-TTTTTGCATCTTAACTGCAGTTAATTTTCCTTCCGACTGCGGTTATATCACTATGAC---CTTACTAGCATTGCAGTGTCAACAACCACTTCTGCTCTTCAGAGACTTCAGCTTTGGAGCATTTAGGCTTTGTTCTCCAAGAACTGGGATATCCATTCTT-ACCCTACAGTGGCTTGATGCCTTTCTGAAGGCGAGAGGGAAGCCTGGGTGACTCAGCGGTGGTCTCCATTCAGCAAAATCTCATGTACATTTCCAGTAGGAACCGCAGAGGTGTGCTTTTCAAGACTCACCAAATACTGTGTTTTCTCTCTTAGGATTTCTTTTCCCC---------TAAAGTATCACGGAAGATACTATGGTTCGTGACTTTCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACACAGTGGGGTAAGGGTGCATACCCCACCCCTT---------------------ACCTGCTCTCATACTGCAGTT------ACATTTACACCA--------AAACCCC-------ATGCAGGGTTCTTTGTGGTGAGTGTTCCATACGTGCTAAGGACCTTA----GTTACAGATTGTTACTTTCTGGTGACCT-------------ATGTTGAATTGAAACCC------CCAAAACTTGAA-----ATTGTG---AACATTTGACATGCAGTAAAGGCCACCTCATCACCC-AGAGAAATCTT-TGGCTGCTGCAGCTAGCCGCT-TCTTGGCTGTGATGTAGTATAGCTTCGATCTCATTTTGTGTT--TGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGTGGGTTGGGGCGGGTAGAGTCATGAGTTTTCCACATCCCTGTGTGGTGGTTTTGCTGACTGTCGCTCCGTGGGACTGGC-TCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACATTTTACATTTTTTACATTGTTTTTCTTTTTTAACCAACTCATTGTTTAAAAAACAAAAACAAAAAAAACCTAATCTGTGAAATCAGCGTAGCATGCCTGGAGCATCAGGAATGGCAGAAAAGTCTGATGC-GCTCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTAAACACACATATAATTTATTAGCT---------GGGAGCTGAACTGGCTGTGAAATCTATGATTTGC-----------TTTGAACATTTGGGTTTTGTTGCCTTTTTCTTAATTGATAACACAGAAA---------------AGAAAGTACCATCAAAGACTGTGGAGTCATTGAGGGTCTGTGTGTCCTCACCGAGAGGGACCTGGTGTGCCCG----CCGGGTCGATCTTC----------------CCACGTGTTAGGGTTTATTTTTATACAACACATTTTTTGACACTTTAAGGTGGGTGGGTGTGTGTGTGTGTGTGTGTGTGCGCGCGTGCGCGCGCGCATGTGTAAGGTTTTATGTTGCTGTTATTTATTTACGAACTTCAGATACGTTTTTATGTATTTTTCATTCTTCTGGAGCTTCC-TAAAAATTGATAAGCATCTGCACTGAAATATAA-----TTTAACAGCAAAAGTAAAAAAGGATTGAAAGTTGTAAATTCCTCATATCACTACAGTGACGATTATTCTAGAAATCGTTGCTTGTGTAGCAAA-GACCAAATAAATAGATTTCAGACACAACCTTGAGCACAGTTGATTTTGGAC--AGCTGCTG-TTTATTAGGAAAGGGCTC-CAGGTGGCAAAGGTG-----CACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAA--GTGAGCAAAGGGATTCACAAATTATGTATTTATTTGTTTTCATAGTTAAGTAGCTGAAGCTCAGAGGCTTTCAGCAACAGAGATGAAAGTGTGGCTTTTTAGTTTTGTGAATGGATGATCACA-------------AAGAAAAAGCATTTTTAAAAAGTTGGCAAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAGTACCAG-TTTCCATTCCTGGGCTGAGA-TTGTTT-----------TTCCCGTGGTTGTATTGTTCTGATTTCACGTACACCAGAGTAACTGATTTTTTTTTGTTTGTTTTCTTGTGGAG----TTAACACCAAATAAAAATTGTAAAAAACAGTTTGTTG chr4 + 94230402 82826159 82826158 82828809 82826159 82826158 82828809 2651 GTTTAAATCCGTAGGTTTCTTCTGTTTATGAAGCAAGGTGTGCAGATGATATAAATGCTGAGGCAAAACCAAACGGCTTCAGGAAGAAGATCTACTCCAGTGACAGCTCCAGCTCTGAAGACACAGCTTCAGAAGGTGGCAGTGAATGGGCTGATCCGTGTGAGGAGGAGCTTTTTTCTCGAACTCAACTATAAAAACTGCAGAGTAGGACGGATGA---TTTAAAAGTAACGTGAGGTGGAAAACTATCCTTCTTGAGGGTCTGTAGCTCTAAAACAACAACTTGAGTTTCCTCTTCAGTTAATGGATTCAGATGTG---TATTTATCTTTCTCTTCTTGCTTATTTTATAGATGAGGACACAGCTGTCCTGTTGAAGATTTTTTTCACCCCCAAACTGTTAAATTCTTGGCTATTTGAACTAGACTAGATTGTGTTGTTAAATCAAGAATGGATGTGCATGTGCTTGTCTTAGTAGTACCACTGCTTTTTTGCATCTTAATTGCAGTTATTTTCATTCGTAACTGTAGCCCTACCACTACTGCTATCTTCTGAGCATCGCAGTGTCTACAAGTACTTCTGCTATTCAGAGACTTTAGCTTTTGGCACATTAGGCTTTGTTCTTTAAGAACCGGGAGATAAATACTTAACACTGTAATCTATCAGTGCCTTTCTGAATGCAGGAGAAAAGCATGAATGACTTGTC--CGGTCTTCATTCAGT-AAATCTCA--TAACTTTGAAGTAGGAACAACAGGGTTGTGC-TTTAGAGACTTACAGAA-ACTGTGTTTTCTATCCTATGATTCCCTTTCTCCCCCCTCCCGCAAACCAACGCTGAGGTTACCATGGTTTGTA---TTTTTGCTAACTGGAGTAGCCAAGGATTT--TTTGTAG----GTATG-GAGGCAATGTGGttt-----ttcttttttctttttttttttttttgtcctttttAGCAACTTGCCGACATAGGGCAGTTTAAAAAGAAGTAACACCAAAAATAATAAACCACTGTGGTGATGTGTGGATCGTTTTG--AAGTTTGTAACAAGTAATGAGAATGTTGTCTCGTTGCAAATGATGGCATTCTTGTAACCTGCAAAAGCATTCAAGACTGAATTTGAGCCTGAATGACTGAAACTAAAATGCTCAGTGTGTTCAGTGTTTTAAATGCA--AAGGGTCAGTGCTTCACTTGAGAGAAATCCTGTGGCTGCTGCAGTTAGCTGCTGTTGTGGCTGTAATTTAGTAAATCTCGTAGTTCATTTTGTGTTTCTGAGAGAATGTGTGGGGCAAGTTACGTGTGTGGTGGGTGGGGGTAGGGAAAGTGATGA-TTTACAACATACATGTGTGATTGCAGTAGTGACTGTTGCTTTATGTGACTTGCTTTTCAATTTTATTTTGTTAACTTAGAAAGTCAATACATTGT-CAAGTTGCATCTGTACAAAAGTATCAACTCCTTGTGCTTTTAACACATTATGCAAAATGTATAAGCCAGGAGGAGCAATATTTGCAAAACTAAACGTTCTTA---------------------GTTTTCACCAACTCGTAG-TTAAAAACCAACAACAAAGAA---CTAAT-TATACAGT---AGCAGCATGTCTATAACATCAGAAAGTGCAG-AAAGTCCAATACTGACTTGAAAAGCTTAACCATTAATTTTGACAGGCAATAAACAT-CATGAGAACTA-TAGCTGTTCGAAACGTGAGCTGAACTGGCTTTGAAATATGTTCTGTGCTAGAAAGGTTTTGTGAGTAACTGGGTTTTGTTGCCTTTAT-TAAATTGATAACATATGAATTGAAACGCGCGGTTAGAAAACCACGCCGTACTTTGTGCAACATTTTAG---TTGAGTTCCTTACCTGAAATTGGCTCAGTTTGTCCTTACCCTGGGACTTTCTTTTGGTCCTCCTATTGAGCTATGTTTTGGGGTTTGTATTCATACAACAAATCTTTTGACACTTTACAG----------------------------------------------------------TTTCTTTTCTTA--ATTTATTTGCAGACTTTGGAGAGATTTTTATATATTTTACTTTCTTCTGGAGCTTCCTTGAGAGCTTTTTAGCACCTGCACTGAGAAGTAGGTAACTGTAACA-TGAAAGTAAACAAGAACTTTACA-CGTATATTCCTCAAATCACTACAGTGAAGAATGGAATAGAACTTCATTCAAGAACAAGAAATGACCAAATGGACATATTTCAAACACAAACTTCAGCTCAGTTAATTTTGGCTGGAGCTGCTTCTTTGGTAAGAAAGGGCTCAAAAATCACAAAGGTGTTGCTTATAGTTACGTTGTGGTATGTAATAAT-TCCAGCACCTT-------TGGAGAAAATAAAATCGTATTTTGAGCTTGGGCAATAACAAAT--TGTCTGTACTCGTTTTCATAGTTTACCGGCTAAAGCTCTAAAGCTTTCAGTG--AGAAGTG-AAGTGTGGTTTTTAGTTTTTCTGTATGGATAGAAACACAAACAAAACAACAACAAAAAGCATT----AAAGGTTGGCATACGCTGAACCGCACTGTGGTATGAAGCGCATTGCATATCCATAGCACTGAAGTATCAGTTTTCCATTCCTGGGCTGAAATTTGTTTCTACTTTTTGCTTCAAGTGGTTGTATTGTTCTGATTTCACGTACACCAGAGTAACTGAT---------TTTGTTTTCTTGTGGAGTTACTTAACACCAAATAAAAATATAAAAGGACAATTGGATG ....x....:-.....x....................:...:...:x..x.x.:..x...::.....::..:.:......x.x:::.....x.:......:.x........x...x.....x....x:........:..x:.:..:....:x.::..xx....:........:..............x..x.-...x.....:.:...x..::..x.---.......:.:.::..x.:.......:..::....xxx::.::....x:x................::............:....:x.........xx.---..x..........................x..x.....--......:.......:...........----:..x.:........................x..................:.............:....................x....:......-..............:........x...:x:.:x::....::.::x..:.....:x:.---...x:x.....:........x....x:.........x...........:......x.:xxxx..............::......:....x..xx..x...-..x..::.:.xxx.:::............x..::...::....x..::.....::x.--:.....:.......:-........--..xx...xx.........x:...:.x.....-...x:.....:..x:..-............x..:..x....:.:....:..---------:...x:.x.:.x..:.x...:......:..:---..:..........:..x............--xx...:.----.....-...:..xx....xx.-----.x.x.x:::.x::::..---------------------..:...:xx....xx......------:x.x.x......--------.....x.-------...::x..x..x..x..--:...x.x:x.:.x..:x.:..:.:x..:----...:..:..x:.x:.x....x..:....-------------.x::......x:.:..:------.::.....x:..-----.x....---.:::...x.x.....--..:..:..x:x.x....::-.........:.-............:....:...-.:x.......:..x.....x.x..:xx.x:............--...........x:x.........x:.............x....::..x.:...x....-...x.x....x.x......:.x.:xx.:x.......:...:::..x....x..-.::.:x..:.x:..x..x.:.:::.::..:.::::...:x.-::...:..:.....:..x::xx...x:.....:xx...:.:.xx:....:...x.x.x.:.x.:.............:...x....x.:.::..xxx.:...---------------------x....x........:.x.-.......x...x......:..---.....-.:.:x.:.---x.:......:..:x.:......:..xx....-......::..:.-.x::.::.x.....x....:.x....x.:......:......:-...:x:.x:..-.....---------.x..............x......x.:.xx.x...-----------.x...::.x:.................x.-.x...........:.x:..---------------.....::xx.::.:x.xx:....x.::xx..x..---:..x..x:.:.xx.:..:.xx.:.:::..x..:..x----.:...x.xx....:----------------.:.:..x..:......:.x..:........x..:.............x:.----------------------------------------------------------...x.x..x:.:--........:.::....::..x.x:.......:......x.x................-.:.:.::.xx.x....:.........:.x:..:-----.x.....-::........x...:.:.xx.x:-:...x........x.............x..x.:xxx.....x.:xx.x.xx.x::.:x...-........::.:.x......:......x...x...x.....:.......x:--.......x-...:x..:..........-x.::.x:........-----:.:.x..x.x:x.xx::.x..:.x..x-.x.........-------..:.x:::.:::.x...x.--x.....xx:..x.x.x......--...x.x..:.:............x.x::...:......x:.:........::--...::..-........:....x:x....x..x......::xx...-------------..x..........----...:.......x........x...........................x.................:...-..................:.-......-----------...xx...........................................---------.................----..................xxx...::...:..x.x.. 10M1I181M1I24M3D98M3D38M2I26M4I96M1I57M3I100M1I57M2D15M1D8M2D31M1D17M1D33M9I31M3D29M2D7M4D5M1D15M5D17M21I21M6I12M8I7M7I17M2D28M4I28M13I17M6I12M5I6M3I15M2D19M1I11M1I21M1I42M2I58M1D53M1I41M1D102M21D18M1D21M3D5M1D8M3D31M1D12M1I43M1D11M1D5M9I34M11I29M1D19M15I34M3D36M4I14M16I50M58D12M2D57M1I33M5I7M1D23M1D61M1I51M2I8M1I18M1I15M5I27M1D11M7D19M2I22M2D52M2D7M1D37M13I13M4D70M1I20M1I6M11I48M9D17M4I37M 1808/2446 73.9% 2651/94230402 0.0% 363/2446 14.8% -75945385 -18285017 +3995 chr4 + 190214555 6893213 6893212 6893295 83 CACGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTACGAGGATCACCTGAGCCCAGAAAGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....::..:.--......:...........::........x:x:.x.:.x...:...:.......:x.:x:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -69139984 -25090418 +3258 chr4 + 190214555 6900214 6900213 6900295 82 CATGGTGGCATGCACCTGTGGTCCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCACTTGAGCTTGGAGG-TTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x...:..:........:..::........x:xx.x.:.x.......:.:::..:.-..x:.....:.. 8M2D60M1I12M 57/80 71.2% 81/94230402 0.0% 3/80 3.8% -69132983 -25097419 +3174 chr4 + 190214555 6923077 6923076 6923130 54 TGTAATCCCAGCTACCTGGGAGGCTGAGGCACAAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:........:..::........x.x::x...x.:...........:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -69110134 -25120268 +30490 chr4 + 190214555 6923354 6923353 6924115 762 ATGTTTGTGTTTTTTCTA----GTTTCTCCTTGGACCAAGATGACTGATGGAAAACTCTCCACCTCTACAAATGGCGTAGCCTTCATGGGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCTCTCCGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGG-GCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGATTCCTACCCTGGAGATCGGGAACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTCCCAGGACAGGCTATGACTCGGTAAAGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCGTCTGCAGCGTGTCCAGTCTTGGGACAGAGCTGTCCACCACGCTGTCCGTCAGCAATGAGGACATCTTGGACCTTGTGGTCACGAGCAGCTCCAGTGCCATTGTGACCCTGGAGAATGACGATGACCCACAGTTTACCAACGTCACCTTGAGCTCTATCAAGGAAACCCGTGGCTTACACCAGCAGGACTGTGTTCATGAAGCTGAGGAGGGGAGTAAATTGAAAATATTGGGGCCATTTAGTAACTTCTTTGCAAGGTAA chr4 + 94230402 82840263 82840262 82841019 82840263 82840262 82841019 757 ATCTTTTCTTTCTTTTTAAGCAGTTACCACGTGGCCCAATACACCTGATGGAAATTTATCCAACTCCTTGAATGGTTTGAGCTTGATGGGTGTTCTAAACACAAGAGCCGGCGGCAGCATCCAGGGTCTTCAG------AACTTGAAGTCCCCGAGGTCTCTCTCATTGTCTGAGTACGGGCC-GGGTCAGCACTCAGGTGCTTTAGAAGATTGTCATAGCCTTAAATCAGTGGATTCTGGTATTCCAACCCTAGAAGTAGGAAATCCAGAGCCCGTTCACTGCAATGTGCTAACTGCGAAGAGGAAGCAGTCAGAACCTGAAATTGTGCCTGACAGAACTTTTCAGAGCGCGTGTACACTGCCGTCCTATGTGCCTCCACGGCCTCTGACTTCTGAACACGATCACGCCGTGCGAAAATCCTCTACTTTTCCAAGGACTGGGTATGACACTGTCAAGCTTTACAGTCCGACTTCAAAAACACTGAATCGAAGTGATGATATCTCTGTCTGTAGTGTTTCTAGTCTTAGCACAGAACTGTCAACAACTTTATCAGTCAGCAACGAGGACATTTTGGACTTTGTGGTCACAAGCAGTTCGAGCGCAATTGTGACTCTGGAGACTGATGAAG---CACACTTCTCAGATGTCACCCTGAGTTCCACTAAGGAGACCAATGAACAAAGTCAGCAGGACTGTTGTCAAGAGACAGAAGTGGACAGTAGACAGAAAATATTGGGACCTTTCACCAACTTCCTTGCCAGGTAA ..x...x:x..:...:..----...x.:x.x...x....x.::x..........x:.x....x...:x::.....:x.::x...x......:....::.::xxx..x.x..x::.xx.x.:...:::..x..:------..::.x...x.x..xx.::::.....xx:.:.............-::.::::x.......-...........::.x..:.....:x.:..x.....:..x..x.....x.....:..::.x..:..:..:.....:..x.x.....::.:.x.xxx:.:..:............x..x:.:..xx.::.x..:..xx.::.:..:........x..::.:.....:....:..:...x...xxx...xxx.x:x.:..:.:x..x..x:x......x........:..x.....x.....x..x......x.x..x.....:..:..:.....:..x...:.x....x:..x..:......:....:.....:..:..x..:......:.x.....:.....x..x..x:.:..x........:........:......:..........:.....:..x..:..x........:.......x...:..x.---....x..:x.x:.:......:....:..:.::.....:...x:..:x:x.x::............xx...x..::.x..:.x..:x....:.:x............:..x..:.x:......:....x...... 18M4I111M6D44M1D15M1I430M3D134M 518/752 68.9% 757/94230402 0.0% 15/752 2.0% -75916909 -18313493 +3119 chr4 + 190214555 6932230 6932229 6932283 54 TGCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACC chr4 + 94230402 76033205 76033204 76033258 76033205 76033204 76033258 54 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC .....x....:.:.........:..:........x.xx.x...x::........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -69100975 -25129427 +3049 chr4 + 190214555 6933275 6933274 6933326 52 TCCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCTTTTCTAGAGG chr4 + 94230402 51227414 51227413 51227464 51227414 51227413 51227464 51 TCCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTT-TAGAAG ...:.:..:.....:.....:........:....::..::.....-....:. 45M1D6M 40/51 78.4% 51/94230402 0.0% 1/51 2.0% -44294139 -49936263 +3146 chr4 + 190214555 6935264 6935263 6935318 55 GGGTTTTGTTTGTTTGTTTGTTTGTTTTTAATTTGAAAACAACCTA---GTAAGAGAA chr4 + 94230402 29820422 29820421 29820479 29820422 29820421 29820479 58 GGTTTTTTTTTGTTTGTTTGTTTGTTTTTAATTCAAAAAGAATCCATCTATAATAGAA ..x....x.........................::....x..:.:.---:...x.... 46M3I9M 46/55 83.6% 58/94230402 0.0% 3/55 5.5% -22885158 -71345244 +3172 chr4 + 190214555 6945719 6945718 6945811 93 AGCCTGGGCAACTAGAGCAAAACTGCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAAAGAAAGCATTAAAGAAATGAGA chr4 + 94230402 57343686 57343685 57343778 57343686 57343685 57343778 93 AGCACAGACTAATAGTGTGAAACTACATCTCTAAAGTAAAGAGAACTTGCAAGGAAACAAAGAAATATGAAAAACATCATCAAAGATGTTAGA ...x::.:.x.x...x.::.....:.:....x...:x...:.:..xxx:x..::...x...:...x......:.x.x...:.....x:.x... 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% -50397967 -43832435 +3010 chr4 + 190214555 6945750 6945749 6945848 99 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAAAGAAAGCATTAAAGAAATGAGATAGCATGGGAGGGGAAAGACTTATTAAGGAGCGAAGT chr4 + 94230402 75150105 75150104 75150203 75150105 75150104 75150203 99 AAACAAACAAGAAAAAAAAAAAACCTTAAATGAAGGTGAGAAGAAGCAAAAATGAAATCAACGAGCAATGAGAGACCTGAACTTATTATGGAGATAAAT ...x...x..:............xxxx...x:...:...:.::.....xx..x.....x.:xx....xx.:::.:xxx::........x....xx..:. 99M 64/99 64.6% 99/94230402 0.0% 0/99 0.0% -68204355 -26026047 +3148 chr4 + 190214555 6949034 6949033 6949116 83 CGTGGTGGCGCACACCTGTAATCCAAGCTATTTGGGAGGCTGAGGCAGGAAAATCACTTGAACCTGGGAGGTGGTGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:....:--....:.:.x.....:...::........x.xx.x:..x..........::.:..x.xxx..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -69084163 -25146239 +3269 chr4 + 190214555 6951288 6951287 6951354 67 TCTCAAAAAAAATAAACAACAACAACAACAACAACATAAAAAACCCTCATAGA------ACTGTATTCAAAAA chr4 + 94230402 62856653 62856652 62856725 62856653 62856652 62856725 73 TCTTAAAAGAAACAAACAATGACAACAACAACAAGAAAAAAAACAGTAATAAATATTTTACTGAACTCTAAAA ...:....:...:......::.............x.x.......xx.x...:.------....x.:..x.... 53M6I14M 53/67 79.1% 73/94230402 0.0% 6/67 9.0% -55905365 -38325037 +3057 chr4 + 190214555 6952833 6952832 6952865 33 TTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTT chr4 + 94230402 42515173 42515172 42515205 42515173 42515172 42515205 33 TTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -35562340 -58668062 +3032 chr4 + 190214555 6957779 6957778 6957845 67 TGTAGTCCCAGCTGCTTCAGAGGCTGAGGTGGGAGGACTGCTTGAGCCCGAGAGGTTGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:......:...x.:........x:xx.x.:.x::.....:...:::..x..x:.....:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -69075432 -25154970 +3219 chr4 + 190214555 6970288 6970287 6970361 74 GTTGTGTGACTTTGGGCAAGTTATTTAACCTTTCTGAGCCTCATTTTCCTCATCTCTACAGTATGGAGAACAGT chr4 + 94230402 79037111 79037110 79037184 79037111 79037110 79037184 74 GCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAAT .:...:....:..:..x.........x.::.x......::...x..:.::..xx.x..x.:.:....:..:.:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -72066823 -22163579 +3439 chr4 + 190214555 6974873 6974872 6974928 56 TTTTTTTGTGTGTCTGTTTTGTTTGTTTGTTTGTTTTTGTTTTGTTTTGTT-TTGTT chr4 + 94230402 83374202 83374201 83374258 83374202 83374201 83374258 57 TTCTTTGATTTATCTGTGGTATTTGTTTGTTTGTTTTTGTTTTGTTTTGTTATTGTT ..:...x:.x.:.....xx.:..............................-..... 51M1I5M 48/56 85.7% 57/94230402 0.0% 1/56 1.8% -76399329 -17831073 +3076 chr4 + 190214555 6974885 6974884 6974948 64 TCTGTTTTGTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTGAGATGGAGTCTTGCTCTG chr4 + 94230402 73984896 73984895 73984959 73984896 73984895 73984959 64 TTTGGTCTGTGGTTTTGTTTGTTTTTGTTTGGTTGTTGTTTATTTTAGATGGAGGCTTACCATG .:..x.:...xxx.................x...x.xx...:...x........x...:.:x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -67010011 -27220391 +3820 chr4 + 190214555 6975964 6975963 6976035 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAGCCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.............:...:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -69057242 -25173160 +3183 chr4 + 190214555 6977029 6977028 6977087 59 TCCCTCCTCTCCCTCTCCCTCCTCTCCCTCTCCCTCCTCTCCCTC--TCCCTCTCCCTCTC chr4 + 94230402 86523033 86523032 86523093 86523033 86523032 86523093 61 TCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCCACTC .....::...........x...:.......:.::.:...::..:.--:...:..:..x... 45M2I14M 44/59 74.6% 61/94230402 0.0% 2/59 3.4% -79546004 -14684398 +3473 chr4 + 190214555 6990320 6990319 6990391 72 GCGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -69042886 -25187516 +3121 chr4 + 190214555 6993870 6993869 6993952 83 CGTGGTGGTGAGTGCCTCTATTTCCAGCTACTTGAGAGGCTTAGGCAGGAGAATCGCTTGAACCGAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x::.--.x..x..............:.....x..x.xx.x...x.:........x..:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -69039327 -25191075 +9552 chr4 + 190214555 6994170 6994169 6994318 149 TTTCTTTGTCCTAGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCGTGAGTTTAAGAAGAC chr4 + 94230402 82873394 82873393 82873542 82873394 82873393 82873542 149 TTTTTCTTCTCTAGGAATATGAAGAAAAAACTGGACGAGCTCACAGACCACTCTCTCCTAAGCAGAATGTGAGGAAGAACCTTGATTTTGAGCCACTCTCCACTACTGCACTTATTTTAGAGGACAGACCAGCGTAAGTTTTGGGAAAC ...:.:.x::...............x..::.....x..x..x:..::....:......x....................:.....:.....:.....:.....:..:.....:..::.x................:.....x:.:.:.. 149M 118/149 79.2% 149/94230402 0.0% 0/149 0.0% -75879224 -18351178 +7793 chr4 + 190214555 6996301 6996300 6996418 118 AAAACTCATTTCTTTCCTG--TCAAGAAATCTCCCAGCAAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCAGTATGAAGAAATGGTGGTTCAGGCCAAAAAGCGAGGTAATGGGGTT chr4 + 94230402 82876070 82876069 82876189 82876070 82876069 82876189 120 AATACTGCTTTTTTTTTTAATTTAAGGAACCTCCCAGCAAAACCAGCAGAAGAAGCTCAGAAACACAGACAGCAGTACGAAGAAATGGTGGTTCAAGCAAAAAAAAGAGGTGATGGAGTT ..x...xx...:...::.:--.:...:..:.................x..............:..............:.................:..x.....:x.....:....:... 19M2I99M 99/118 83.9% 120/94230402 0.0% 2/118 1.7% -75879769 -18350633 +3831 chr4 + 190214555 6997490 6997489 6997568 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:...........::........x.xx.x...x.:...........:..x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -69035711 -25194691 +7457 chr4 + 190214555 6999083 6999082 6999208 126 AGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGCTCACCTGGAATAATGAGATCTTACCTAACTGGGAAACAATGTAAGA chr4 + 94230402 82877766 82877765 82877891 82877766 82877765 82877891 126 AGAGCTTAAAGAAGCCCAGAAGAGAAAGAAGCAACTGGAGGAACGTTGTAAGCTGGAAGATAGCATTGGCAATGCTGTTTTAACTTGGAACAATGAAATCTTGCCCAATTGGGAAACTATGTAAGA ......x............x::..:........:.....:...x.x..:.::x.x..:..x........x..:.....x:.x..:.....:.....:.....:..:..:........x........ 126M 98/126 77.8% 126/94230402 0.0% 0/126 0.0% -75878683 -18351719 +8652 chr4 + 190214555 7001129 7001128 7001256 128 TTCTGTTTTTGTCCAGGTGGTGCTCTAGAAAAGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAG chr4 + 94230402 82879287 82879286 82879413 82879287 82879286 82879413 127 TTCTGTTTC-GAACAGGTGTTGTTCCCGTAAAGTTCGAGAGTTATGGTGGCAGGGCATTCCACCGAGCGTGAGAGGCAAAGTCTGGAGCTTGGCAATTGGCAACGAGTTAAACATCACCCATGGTGAG ........:-.xx......x..:..:x.x...........x..............x..:..x..:..:.......................:..x.................:........:...... 9M1D118M 109/127 85.8% 127/94230402 0.0% 1/127 0.8% -75878158 -18352244 +7468 chr4 + 190214555 7006603 7006602 7006741 139 ATGTAAT--------TATTTTTGGCATCTTTTGACAGATGCTGGTTTTTCAGCAGCAGACAGAGAAGCCAGTCTGGAGCTTATTAAACTGGACATTTCTAGAACATTTCCTAATCTCTGCATTTTCCAGCAAGTAAGTGGTGGTGAC chr4 + 94230402 82881595 82881594 82881737 82881595 82881594 82881737 143 ATGTAATAAGAGCAGTAACTTTGGC----TTTTGTAGATGCTGGATTTTCTACAGCTGACAGAGAAGCAAGTTTGGAGTTAATAAAACTGGATATCTCAAGAACGTTTCCTAATCTCTGTATATTCCAACAAGTAAGCAGTGTTAAC .......--------..x:......----...x::.........x.....x:....x...........x...:.....:.x..x........:..:..x.....:..............:..x.....:........::...x.:.. 7M8I10M4D118M 110/135 81.5% 143/94230402 0.0% 12/135 8.9% -75874992 -18355410 +6794 chr4 + 190214555 7009845 7009844 7009965 121 ATGTGTTGTTTTTGCTGTGTTGATCCTTTTAGGGTGGTCCATATCATGACATGTTGCACAGTATTTTGGGCGCTTATACTTGTTACCGGCCAGATGTGGGTTATGTAAGTGAAGTTTCTCA chr4 + 94230402 82882760 82882759 82882878 82882760 82882759 82882878 119 ATGTGTTGTCTTGCTTTTGTTGA--ATTATAGGGCGGTCCTTACCATGACACATTGCACAGTATTTTAGGAGCCTATACTTGTTACAGACCTGATGTAGGATATGTAAGTAAACTTCTTCA .........:..xx:.x......--x..x.....:.....x..:.......::..............:..x..:............x.:..x.....:..x.........:..x..::... 23M2D96M 95/119 79.8% 119/94230402 0.0% 2/119 1.7% -75872915 -18357487 +11095 chr4 + 190214555 7010640 7010639 7010789 150 TCTCCTCTCT-CAGGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAACTTAGATACTGCAGATGCCTTTATTGCCTTTTCTAACCTTCTGAATAAACCCTGTCAAATGGCGTTTTTTAGAGTGGACCATGGCCTTGTGAGTAT chr4 + 94230402 82884535 82884534 82884685 82884535 82884534 82884685 151 TCTCCTTTCTTCAGGTACAAGGCATGTCTTTCATTGCAGCAGTACTGATTTTGAACTTGGATACTGCAGATGCCTTCATTGCATTTTCTAACCTTTTAAATAAGCCCTGTCAAATGGCGTTTTTCCGTGTGGACCATGGCCTTGTAAGTAT ......:...-.....x..:........:.....x........::....:........:.................:.....x............:.:.....:....................:x.x.................:..... 10M1I140M 132/150 88.0% 151/94230402 0.0% 1/150 0.7% -75873895 -18356507 +10024 chr4 + 190214555 7014430 7014429 7014564 135 TTCATATTATCTCCCTAGATGTTGACTTATTTTGCTGCATTTGAAGTATTCTTTGAAGAAAATTTGCCGAAATTATTTGCGCATTTCAAGAAGAACAACCTAACTCCAGATATCTACCTAATTGATTGGTAAGAC chr4 + 94230402 82887576 82887575 82887710 82887576 82887575 82887710 135 TCCCTATTGTTTTCCCAGATGTTGACTTATTTTGCTGCATTTGAGGTATTCTTTGAAGAAAATCTGCCAAAGCTATTTGCTCACTTCAAAAAAAATAACTTAACTCCAGATATCTATCTTATTGATTGGTAAGAC .:.x....:.:.:..:............................:..................:....:..::.......x..:.....:..:..:...:................:..x............... 135M 116/135 85.9% 135/94230402 0.0% 0/135 0.0% -75873146 -18357256 +15462 chr4 + 190214555 7024988 7024987 7025264 277 AACTTTTACCCCCT-----AGGATCTTTACCTTATATAGTAAATCTCTGCCCCTCGACCTGGCCTGTCGTATCTGGGACGTGTTCTGTCGCGATGGGGAAGAGTTCCTGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCCGGCTGCCCGAGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAACAAGAAGTGGGCTCAGGT chr4 + 94230402 82894581 82894580 82894862 82894581 82894580 82894862 282 AAATTTTACTCTGTTTTTCAGGATATTCACATTGTACAGCAAATCTTTGCCACTAGACTTGGCGTGTCGTGTCTGGGATGTGTTCTGCCGTGATGGAGAAGAGTTCTTATTTCGTACAGCCCTGGGAATATTAAAACTTTTTGAAGATATTTTGACCAAAATGGATTTCATTCATATAGCCCAGTTTTTAACGAAGCTACCAGAAGACCTACCTTCAGAAGAATTCTTTACATCTATTGCTGCCATTCAGATGCAAAGTAGAAACAAAAAGTGGGCTCAGGT ..x......:.:x.-----.....x..:..x..:..:..:......:....x..x...:....x......:.......:........:..:.....:.........:.:..:..:..:........x..x:.:..:..x..:..:..:..::.......:.....:........:..:........::.:..xx:...:..x..:.....:..:x.x..:..::.x...:.x..:..:..::.x..:........:..:x.......:.............. 14M5I263M 208/277 75.1% 282/94230402 0.0% 5/277 1.8% -75869593 -18360809 +4632 chr4 + 190214555 7030308 7030307 7030398 91 TCTTCCCTGTGACTTCT----------AGGTACTGACTGCATTGCAGAAAGACAGCCGGGAAATGGAGAAGGGAAGTCCGTCCCTCCGACACTGA----GGCTGC chr4 + 94230402 82897703 82897702 82897807 82897703 82897702 82897807 105 TCTTCTCTGTCATTTCTTGAAATATCCAGATACTGGCTGCTCTGCAGAAGGATAACCGGGAAATGGAGAAAGGAAGTCCTTCACTTAAGCATTAACTTTGGCTGC .....:....x.:....----------..:.....:....x:.......:..:.:...............:........x..x..:x::..:.:.----...... 17M10I68M4I6M 72/91 79.1% 105/94230402 0.0% 14/91 15.4% -75867395 -18363007 +8158 chr4 + 190214555 7032827 7032826 7033110 284 GGCCGGGACCTTTGTCCAGCCTGCACAGTAGAGTGAGGCTGCCTCTC--CCGCC----------AGGCATTG--GGATCCCATTTAGAAA--CGGCATTCACTTCAGAAGGTACTTTTTAACTGCTCAGTTTTTGACTATTTTAAATAGTT----TGCTGAAAACTCCTGATAACACTTGCTACATATCATGTTTTAATTGCTTGTAC--AGTTAACCTTTAATTTTATTTAGTAAAGTGTATCAAAGTAGGACTTTTTTGAATTGTAAATAGGTGGTTTTATTAAATAAAAGTCAATGTAAAATT chr4 + 94230402 82901386 82901385 82901686 82901386 82901385 82901686 301 GGTTTGGAATTTTGTACAACCCGCACTTTATTGTAAAGCCGTTTTGCAACCGCCGTCAGCAATCAGTCATTAATGTGTTTCATTCAGCAATTCAGT-TTCATTTGGAAAGGTACCTTCTAACAGCTCAGTTTTGAAC-GTTTTACAGACTAGACACGTAGAGAACCGTTGATA-CATCCTCTGTACATCATGTTTAAATTGTTTTTATGTAGTTATCTGTTGGTTTTGTTTAGATATGAGTATCGAACTGGAACTTTTTTCAACTGTAAATATATGGTTTTATTAAAT-AAAGTC-ATGTAAAGTT ..::x...x:.....x..:..:....xx..xx..:.:..:.::.:x.--.....----------..x....:--.x:.::....:..x..--.:.:-....:..x::.......:..:....x..........x:..-:.....x.x.x.x----:.:x..:...:x:.....-..:::x..::.:.........x.....:..x..:--.....x.:x..::....:.....xx.x.x.....:..x.:.:........x..:........x:..............-......-.......:.. 47M2I5M10I8M2I16M2I4M1D40M1D13M4I18M1D34M2I78M1D6M1D10M 199/279 71.3% 301/94230402 0.0% 27/279 9.7% -75868559 -18361843 +3268 chr4 + 190214555 7036151 7036150 7036233 83 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTTAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--....:.:...........::........x.xx.x...x.:...x.....:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -68997046 -25233356 +3075 chr4 + 190214555 7036862 7036861 7036935 74 GTGCTCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCCGGAGAATCGTGTGAACCTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:.:.........::::........x..x.x...x.::x......::.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -68996342 -25234060 +12008 chr4 + 190214555 7041276 7041275 7042377 1102 AAGGGAGAAAGGCTTTGGCCTCCCTGATCTTCTGCCTCACGCCTCTGCAGGACAAAGTGAGGCTAGCGTGGTGGCGCTTCAGGGATTCCAGGCGCCGGTGAAGCAGTTCGGTCTTGTCCACCTTTTCTTCCAAGTCCCGAAGAAGTGAGTCCTTGCCTAGAAGGCCGCACTTCTGATTCAGTCTGATGTTGTCCGTCCGCAGCCCCTCTCGGGCTTGCTTCGTCTTGGTCAGGATGTCTCTTCCTAGGGCGGCCTGGGCCTC--GATTTCTGCCAGCTGTGTCTTTTTGCACGCGTTCTCCATGTCCATGAAGTGCAGCTTTTCCTTCACGTGGGTTATTACTTGCACACTGTTGGTCACCTTGCTGCGAAGTTTTAAAAGTTCCTCATTTCGTTCCTCAATTTTCTCA--------TTGAAGGTTTGGTTCTCAATCTTCAGCT----GTTC---------------AAAGTCAATAAGAAGCAGACCCTGGGTCAGGTCCTCCTGGGTCCTCATCCTGGTTTCAAAATGCACC-----AGGCT---CTGCTTCAGCTGAATGTTCTCCAGCC-------------------------GCACGGCGCTCATCTCCT---------TCTCCTTTTTATCCTCCAACGCCTGGATCTGCTCCACCTCTCGCAGAGCAGCCTGGCGCCCGCCCCTCATCCGACAGCTGCCC-ATGGCCTGCATCACCACCTGCTTCTTGAGTGCCTGGAAGCGTCGCCACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCG--CTTCAACTGGCCCAGCTCCTGGTGGTACCACTGCAGGTCGTCTGCCTGCTGCT------------TCTTCAGCTCCTCCAGCATGCCCAGATGGCGCAGGTACGCTTGCTCTTTCTCGGGG----GCCTCGGCCTCTGCGCCCCGGTCAGCCACCTCAGCGGCCTCCAGGCCCTTCTTTCTG----CGCAGCGCCTCGAAGATCTTGTGCTGCAGGTATAGGTTGTAGCGCTGGGAGCGGTTCCGCTCCACCAGCAGGGAACGGTACTGGTCCAGGAGGTCGCTGCGCAGCTGCTGCTCCTGCAGCTTCTGGACCTCCTCGGACCACTCGAGGTCCTCAAACTC---GTCCCTTCCATAGAGG----------------CGCTTCCCCTCTTCCTGGCTTTTGGCCGGGCGTCCTTC chr4 + 94230402 82903183 82903182 82904315 82903183 82903182 82904315 1133 AAGGTAGAAATGAATCAGCTTTGCTGATTTTTTTCTGCATTTCCCTCTGTTTGAGGATCAGACCGGCGTGGCGATGTTTCAGTGCTTCCAGCTGCTGCTGTAACAACTCCATGGTGTTCACCTTTTCCTCCAAGTCCCACAGCAGTGTCTCCTCTCCAAGCAATCCGCGTTGCTGCTGCAGCTTCACCTTGTGTGCCCGCAGCCTGTCCCTGGCCTGCTTGGCCTTGGTCAGCGCATCTCT--CTTCTGCAGCAGGGTGCTCGTGATGGCCCTCAGCTCAGCCTGCCGGCCTCTGTTCTCAGCTTCCACAAGCTGCAGTTTCTCCCTGACGTGGCTGAGGATCCGTTCAGCGTTAGCGACCTTCGTTTTGAGCTTCAGCACCTCGCCGTTGAGGCCGTCGAGCTTTNNNNNNNNNNCTCGAGGTTTCGGACCTCAAGCTTCACCTTCACGTTTTCCAGCCGGGCCTGGAGGGGCGGAAGCACGCGAGGGACGGTTCCGCGCCTCC--GATCTGCACGGCAGGGAAGGAGCGCGGCACGGAAGGCTCACCCGTGCGAACGGGAAAACCTCCGCCCTGCGGGAGAGCGCGCGGAGCCGGGGGCGCTGCACTCACCTCCCGCACGGAGGTCTCCTTGTCCCGCTCCCGGGCCTGGATGTCGCCCACCGTCCTGAGGGCCGCCTCCCTGCCGCCCC-------GCCGCCGCCCGAGGGTCTGCACGGCCACGGCCTTCTTCCGCGCCTGGAAG-GCGGC----------------------------CCAGGCGGCGCCGGCCCTCGCCTCGCT---CTCCGCGCGGTCCCTCCGCCGCGCGTCCACccgctgctgccaggttgcggcctcgcgctcccgccgccgccacagctcccgcag---ctcccgcagccgctcggcgaacagctgctgcccgcccgcctcgtccgcccgcc--------------gctctccccgctgcgaccgcagcgcctctcccagcagcagctgcagacggccgtcggcctggtgcagccgctgccgcTCGGCCTCCAGCGCCCGGTACTCGGCCAGCAG--CGCCTCGC-------GCTCC------------GCCTCCTCGGCTTCAccgcgggctgcgggctccgggtccccgccggcgggggcggcctcctccgcgccgctccgctcctccccggcgcccggcgcggT-TCCTTC ....x.....x.xx.::..:.:x.....:..:.x.:x..:x:.:..x::xxxx.:::.x..:.::......:.::.:.....x.x......x:..:.x..x.:..::..x:.xx...:.........:..........:x..x....xx....:x..x..x.:x....::.x...x.x...::.x.:x....x:.:........:x..:.x...:.....x.:.........x:::.....--..xxx..:..xx..xx...--...xx.:x:.....xx.:..x::x..x:x:......x::x....::.:x.....:..:...:.x......x.x.xx.:::.:x..x:...:.:x.....xx.x:x:..:..:.:x.x:..x:.:..xx.x:.x..:.x:..:XXX--------.:..:.x..:..x:.....x.....x..----...:---------------.::.x.::x.:x.x..:::xxx:..x..x.xx.....--.:..:x..:xx::.xxxx::.::..:x.-----.....---.:.:x:x.:.x.:.x:x:....:x..-------------------------..:.x..:....:....:---------.......x.:x:x....x:x........x.xx:.....x::.xx..:..x....xx.xx.......-------:.x..:....-.x..:.....:x:....xxx......xx.:.........-.:x..----------------------------..x...:x:....--.:..:x..x..:---....xx.:...x..x.:..x.xx....::..:......------------:..:xx.....:x.x..xxx.x...x.xx.....---.x.::..xx::x.....x.----..:x.x...:x:x....:..x:.:x..:..--------------..:..:.::x...----...........xxxx.x.xxxx.......:::xxx..:.xxx:.x..x::x..x.x......x:..xx...x.xx.......x.x....x..--...:x...-------.....------------:.........x::xx:..x..x.:x.:::...---.....:x..:xx.:..----------------....:.x.::..:..:...x:::...xx..:-...... 241M2D19M2I145M8I28M4I4M15I37M2D28M5I5M3I26M25I18M9I66M7D10M1I39M1D5M28D13M2I12M3D38M12I34M3D19M4I30M14D13M4I92M2D8M7D5M12D32M3I16M16I31M1D6M 617/1017 60.7% 1133/94230402 0.0% 195/1020 19.1% -75861907 -18368495 +24302 chr4 + 190214555 7043528 7043527 7043871 344 CGGGGGCGCGGCGGCTGCGGCGGGCCGGGCGGCGGGCGGCGAGCGGGGGAAGATGGCGGAGCTGGGGAAGAAGTACTGCGTGTACTGCCTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCGGCGCCGAGATCGGCCACCACCGCCGCTACCACGGCTACCAGCTGGTGGACGGCGGGCGCTTCACGCTCTGGGGGCCCGAGGCCGAGGGCGGCTGGACCAGTCGCGAGGAGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGAAACTGGGT--GAGCGGCGCGACG-GGGGCCG chr4 + 94230402 82905771 82905770 82906113 82905771 82905770 82906113 343 cgggggcggggccgcgcgtgcgtgcggggcggcgg----cgggcggggTAAGATGGCGGAACTGGGGAAGAAGTACTGCGTGTACTGCCTGGCCGAGGTGAGCTCCCTGCGCTTCCGCTGCACCGAGTGCGCCGACATCGAGCTCTGCCCCGACTGCTTCTCGGCCGGCGCCGAGATCGGCCCGCACCGCCGATGGCACGGCTACCAGCTGGTGGACGGCGGCCGCTTCACGCTGTGGGGCGCCGAGGCGGAGGGCGGCTGGAGCAGCCGGGAGGAGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGCAATTGGGTAAgggccgcccgccgcggggccg ........x...x..xxxx...x..x.........----..:......x...........:..........................................:.x........................xxx...........x........x............................xx........x.:x..........................x...........x.....xx.......x.............x...:..x............................................x..:.....--.:..x..x..x..-....... 35M4D285M2I13M1I7M 303/340 89.1% 343/94230402 0.0% 7/340 2.1% -75862243 -18368159 +68581 chr4 + 190214555 7054025 7054024 7055057 1033 TGATGGTGGAACTAACTT-CTGCCCTTTGTCATCGT------AGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTGGGGAAGGCCTGCATCCCCGACACCATCCCCAACCGCGTGACAGACCACACCTGTCCCAGCGGAGGCCCCCTCTCACCCAGCCTCACCACCCCGCTGCCCCCGCTGGACATCTCTGTGGCTGAGCAGCAGCAGCTGGGCTACATGCCGCTGCGGGATGATTACGAGATCGAGTATGACCAGGATGCCGAGACGCTCATCAGCGGGCTCTCTGTCAACTATGATGACGACGACGTGGAGATCGAGCTGAAGCGCGCCCACGTGGACATGTACGTGCGGAAGCTGAAAGAGAGACAGCGGCGGAAGAACATCGCCCGTGACTACAATCTGGTGCCAGCCTTCCTGGGGAAGGACAAGAAGGAGAAGGAAAAGGCGCTGAAGCGCAAGATCACCAAGGAGGAGAAGGAGCTGCGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACATGCACAAAGAAAAAATGCTCCGGGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTGTCAGATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGAGTCCAGCCCGCTACGTGACTGTGAAGACTATTATAATTAAAGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAGCTACCTGGACAAAGTCCTAAAGAAAAGGATTTTGAATTTCCTCACAGAAAGCGGCTGGATCTCCAGGGACGCGTCTTGAAGC chr4 + 94230402 82906788 82906787 82907825 82906788 82906787 82907825 1038 TGATGG--GAGCCATCTTATTGCCCCTCCTTATTTTCCATTTAGGAAGATATGGCCGCTCACGTGGGAGCATCCCGGACGCCCCAGGAGGTGATGGAGCACTACGTGAGCATGTACATCCACGGCAACCTGGGGAAGGCCTGCATCCCCGACACCATTCCCAACAGGGTAACGGACCACACGTGTCCCAGCGGCGGCCCTCTCTCTCCCAGCCTGACCACTCCGCTCCCGCCCTTGGACATATCGGTGGCTGAGCAGCAGCAGCTGGGCTACATGCCGCTCCGGGACGACTACGAGATTGAATACGATCAGGATGCTGAGACTCTGATCAGCGGCCTGTCGGTGAACTACGACGATGACGACGTGGAGATAGAACTGAAAAGAGCTCACGTAGACATGTATGTAAGAAAACTCAAGGAGAGGCAACGGCGGAAGAACATTGCGCGAGACTATAACTTGGTGCCGGCCTTCCTGGGGAAGGATAAGAAGGACAAGGAGAAAACCCCCAAACGAAAGATCACGAAGGAAGAGAAGGAGTTGAGGCTGAAGCTGAGGCCTCTGTACCAGTTCATGTCCTGTAAGGAGTTCGAAGACTTCTTTGAGAACATGCACAAGGAGAGAGTCCTTCGAGCGAAGATCCGGGAACTGCAGCGGTACCGTCGGAATGGAATCACCAAAATGGAAGAGTCGGCGGAATACGAGGCAGCCAGACATAAACGGGAGAAGAGGAAGGAGAACAAAAGCATAGCCAGCTCCAAGAGGGGGAAGGAGGACGGCAAAGAAGGGGAATTTGCTGCCATTGAAAACCTGCCTGGTTTTGAACTCTTATCGGACAGGGAAAAAGTGCTCTGCAGCTCTCTGAATTTGAGTCCTGCGCGTTACGTGACTGTAAAAACCATCATCATTAAAGACCATCTTCAGAAAAGACAAGGGATCCCTTCCAAGAGCCGCCTTCCCAGTTACTTGGATAAGGTACTGAAGAAAAGGATTTTAAACTTTCTAACAGAGAGCGGTTGGATATCCAGAGATGCATCATGAAAC ......--..:.:.x...-:.....:.:x.:..:x.------.............:..:.....x..x..x........x.....:..............:.......................x................................:......x.x..:..:........x...........x.....:.....x........x.....:.....x..x..x:.......x..x...................................x.....:..:........:..:..:..:........:.....x..x........x..x..x..x.....:..:..:..............x..:.....:x.x..:.....:........:..:x.:..:..x..:.....:..:..............:..x..x.....:..::.......:.................:........x.....:..::.x.:x..:..x........x.....:.........:..x.x..............x.................x..:........:..x...:.:.....:...........:..:.:.:.x..:..:..x........:.................x..:..:..:........:..............:..:...........xx.:...............................:.x.....:.......:x....:.................x:.x..:..:..:........:.....x..x..:..:..:...:.:..:..:x.x..:..:...............:.:..:........x..x..:...........:..:..:..:..x...........:..:.....:x.:.....:.....:.....:...........:..:...:....:..:..x..:..............:..:..:..x.....:.....:.....x.....:..:..:..x....:. 6M2D10M1I17M6I998M 849/1031 82.3% 1038/94230402 0.0% 9/1031 0.9% -75852763 -18377639 +22509 chr4 + 190214555 7060856 7060855 7061227 372 CAGCAGCTAAGCTTCCTTCACCACCCCCACCAGGGCGGGTCTCAGAGTGCGCCCATGCAGCTTGTACCCCACTTTGCTAACTAGGGCCACTGTGCCTGGCTCCTTCCCCTCAACCGGTGTGTGGAACAAGGCCTCATGTTCATAAGGGTCGAACTTGGCTCCGACAGGGTTCAACTTGAGCAAGCCATGCTTTGTGAACACCTTCTGGATCTGGACTTCAGTCATGACCAGCCCCTCATAGAGGTTCTTCAGGTGAGGGTTATCGTCTTTAATTTCTTCTTTTGGAACACACTGTGTTGCCTTCTCCAGAACGTCTGCCACCTCCAACAAGTCCTTGCAGAAGGCTTGAATGCCTGGATGAAGTTAAAGAAG chr4 + 94230402 82913789 82913788 82914160 82913789 82913788 82914160 372 CAGCAGCTAAGCGTCCTTCACAACACCCACGAGGGCGGGCCGCAGCGTACGCCCGTGCAGCTTATATCCAATCTTGGATACTAATGCAATAGTGCCAGGCTCCTTCCCTTCCATGGGAGCGTGGAACAATGCTTCGTGTTCGTAGGGGTCGAACTTGGCTCCGACAGGGTTCAGTCTGAGCAGCCCGTGTTTTTTGAACACTTTCTGGATCTGTACTTCTGTCATAACAAGACCTTCATATAGGCTCTTCAGGTGAGGATTTTCATCTTTGATTTCTTCTTTTGGAACGCTTTCTGTTGCTTTCTCCAAAATGTCTGCGACTTCTAGCAAGTCCTTACAGAAGCTCTGAATACCTAAAAAAAGAAAGGAAAG ............x........x..x.....x........:.x...x..:.....:........:..:..x.::...xxx....:x..x.:x.....x...........:..x.:x..x.:.........x..:..:.....:..:............................:::......:x..:..:...x.......:...........x.....x.....:..x..x..:.....x...:.............:..x..:.....:.................:.x:.x......:.......:..:......x..:..:.:.........:......x::.....:...::.x:...xx.:::... 372M 292/372 78.5% 372/94230402 0.0% 0/372 0.0% -75852933 -18377469 +7568 chr4 + 190214555 7064056 7064055 7064244 189 CTCACCACAGTCTCCTTCAGCTGTTCCTCCAACTTGACCTTCTCTTCCAGGAGGGTCTTCTCTGTAGCAGGAGGATCTGCCTTCTGTTCA------CTCTGACCCATGTCCTCTTCCAGGTTCTGGCCACTGTTCTTTTGTTTCGTGGCTGTGCACAACAACCGGGGAGATGGCCTACAGGGAAGTCCACACGTG chr4 + 94230402 82918343 82918342 82918535 82918343 82918342 82918535 193 CTTACAGTAACTTCCTTGAGCTGCTCTTCCAGTTTGGCCTTTTCCTCAGTTAGCATTCTTTCAGCAGCAGTGGGTTCAGCCTTCTGCTCATTGTGGCTCTGACCCTGGTCTTCTTCCAAGTTCTGGCCAGTGCTCTTCTGCTGTGTTGCCACACAAAGCAGTCGTGGAGAGGTCCTATGGCAAAA--AACACGTG ..:..x::.:::.....x.....:..:....::...:....:..:..x:xx..x:.::.:..x.:.....x:..x..x........:...------.........xx...:.......:..........x..:....:..:.x:..x..::::..x.:..::..x.....x.x....::.x:..:--x....... 90M6I89M2D8M 128/187 68.4% 193/94230402 0.0% 8/187 4.3% -75854287 -18376115 +3330 chr4 + 190214555 7093449 7093448 7093554 106 GGACGTCTTTGTATCCTTGGAGCAAATAAAGATTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 69163311 69163310 69163418 69163311 69163310 69163418 108 GAACTTCCTCATTCCACTGATGCTGTGAATAGTTGATTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT .:..x..:.::.x:.x:..:x..x:xx..x::..xx...........x..............:..:.::.::.x..::--..:...x.:x..::....x...x..... 78M2I28M 68/106 64.2% 108/94230402 0.0% 2/106 1.9% -62069862 -32160540 +3166 chr4 + 190214555 7093478 7093477 7093570 93 AGATTTCTTTCT------TTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTT chr4 + 94230402 64726486 64726485 64726584 64726486 64726485 64726584 99 AGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ....x:......------.x..x...x.x...:x.:.:....:....:x.xxxx.:...:....:..::.:x:........:.:..:...:...::... 12M6I81M 62/93 66.7% 99/94230402 0.0% 6/93 6.5% -57633008 -36597394 +3390 chr4 + 190214555 7093478 7093477 7093584 107 AGATTTCTTTCTTTTCTTTTC---TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-------TCTTTCTTTCCTTCTTTCCTTCTTTCCTTCT chr4 + 94230402 63697114 63697113 63697235 63697114 63697113 63697235 122 AGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...:..:x...:.:..:....---.x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-------.:.:...::...::....:.....:.:..:. 21M3I44M5I11M7I31M 73/107 68.2% 122/94230402 0.0% 15/107 14.0% -56603636 -37626766 +3356 chr4 + 190214555 7093484 7093483 7093620 137 CTTTCTTTTCTTTTCTTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTCTTTCTTTTCTTT chr4 + 94230402 19215419 19215418 19215560 19215419 19215418 19215560 142 CCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCT .:::.:...:....:....xx....-----......x..::...x......xxx....x.x..::::xx:......:.x.:.:.::.x.:x.....:xxxx.....:.:xx::...:::.x....x.x.:.....x.:..:. 25M5I112M 83/137 60.6% 142/94230402 0.0% 5/137 3.6% -12121935 -82108467 +3498 chr4 + 190214555 7093487 7093486 7093603 117 TCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTT chr4 + 94230402 63697118 63697117 63697238 63697118 63697117 63697238 121 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATT .:.x...:.:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:------..x....:.:x.xx......--...::...::....:.....:.:...:x.. 65M6I20M2D30M 75/115 65.2% 121/94230402 0.0% 8/115 7.0% -56603631 -37626771 +3263 chr4 + 190214555 7093489 7093488 7093637 149 TTTTCTTTTCTTTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTCTTTCTTTTCTTTTCTTTTTTTGGGATGGA chr4 + 94230402 33980782 33980781 33980934 33980782 33980781 33980934 153 TTCTACTTTCTCACCTCAAATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTTATTATGGA ..:.x:.....:x:..----....:.xx.:x...:x...:.x.xxx.x.::...:x....x..:..xx....x..:...x...:..:.....x.x....::::.:::..:.:x.:..:x:.:xxx...x:...x::..x......:xx..... 16M4I133M 88/149 59.1% 153/94230402 0.0% 4/149 2.7% -26887293 -67343109 +3905 chr4 + 190214555 7093499 7093498 7093628 130 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCCTTCTTTCCTTCTTTCCTTCTT-----------TCCTTCTTTCCTTTCCTTCTTTCTTTCTTTTCTTTTCTTTTTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:x..x:::.:.......:....-------.x:.:..x.x..x..::..::x......x.-...x..:..x:........:.....-----------...::x...:...x:..:...::.......::::.:.x..:.. 32M7I30M1I25M11I43M 88/130 67.7% 149/94230402 0.0% 19/130 14.6% -43082767 -51147635 +16073 chr4 + 190214555 7112160 7112159 7112405 246 CATTTGGACCTTGA-------GAGCTTGTTTGGAGGTTCTAGCAGGGGAGTGCAGCTACTCATATACCCTTGACCGAAGACCGGT-CCTCCTCTGTTGGGGATGGTCA---------ATGGAGCATGCAGCTTTGGGAGGGACGCATGTGGAGCAGTGAGGGAGGAAGGGGACACCCGTCTAGCCAGCAAGATCAACCGAATCAACCCTGGCAATCAATGGCGTGACAGATGTCGCAGCCAGATCGCCCTCACATCCCCCCAG chr4 + 94230402 24950286 24950285 24950547 24950286 24950285 24950547 262 CATTTGGATGTTTAATTTCTTGAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCCttgcag ........:x..x.-------.............................:........-.:............:..x..x....-..x:....:.:.....x....:---------.:x:...:........:............::......:.....:........:.......::.........x......:..:............::........x...................................::x... 14M7I38M1D25M1I22M9I146M 210/245 85.7% 262/94230402 0.0% 18/245 7.3% -17838126 -76392276 +3303 chr4 + 190214555 7115317 7115316 7115399 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTAAAGCAGGAGAACTGCTTGAATCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:.........::::.....:.:x.xx.x...x::......:....:..x:xx:.....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -68917880 -25312522 +3257 chr4 + 190214555 7121646 7121645 7121709 64 TCTGAAAAAACAAAAACAAAACAAAAACAAACAAACAAAC-----AAACCCCAAA------GCCACGTTGTGAAT chr4 + 94230402 57188493 57188492 57188567 57188493 57188492 57188567 75 TTTAAAAAAGCAACAGCAAAACAAAAACAAACAAACAAACTCCAGAAAACCCAAAAAGCAGGACATCCTGTGAAT .:.:.....:...x.:........................-----...x......------.x..:x:....... 40M5I10M6I14M 54/64 84.4% 75/94230402 0.0% 11/64 17.2% -50066847 -44163555 +4608 chr4 + 190214555 7137444 7137443 7137617 174 TTGATTGATGGGCTCTGGGAGTCAGTCCACAGTCAATCTGTATCAGCGCAGGGCCCGATTTGAAATTCAAATTCCAACTAACCAGAAAATGAATATGAATTTCATATTTTGTTATTTTCACCGACCGGGCTGCGTCTCTGCCAGTGGCGCGGGGGTGCGGCAGGCTCCACTGCA chr4 + 94230402 82944402 82944401 82944568 82944402 82944401 82944568 167 TTGATTGGTGGTTTC-AGATGACAGATGCTTCTAAATCTGAACAAACATAA---CTAATATGAAATTCAAATTCTGATCAAACAAAAAATTAATATGAATTTCATATTTTGTTGCTTTTAATAAGCACA-GATGTCT-TGCCAGTGGCTC-AGGCTCTGTCAAGCATCGCTGCA .......:...x:..-:.:x.x...x:xx:xx.x......x.:x.:.::.:---.::..x..............::.::..x..:.....x......................::...:.x::.x.:x:-x::....-..........x.-:..x.x:.x..:..x:.:..... 15M1D35M3D75M1D7M1D12M1D23M 112/167 67.1% 167/94230402 0.0% 7/167 4.2% -75806958 -18423444 +3320 chr4 + 190214555 7138289 7138288 7138374 86 GGCCTTGGACAAGTTTCTTAGCCTCTTTGTGCCTCAGTTTCCTCATCTGTACGG-GGGGATAAGAG----CACCCCCCTCACAGGTGAGTT chr4 + 94230402 83501141 83501140 83501231 83501141 83501140 83501231 91 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATT .:.::...:...:..x....:...x.x.............:.:..:.....x::-..:.x.:.x..----:...:x.........x.x:.. 54M1I11M4I21M 61/86 70.9% 91/94230402 0.0% 5/86 5.8% -76362852 -17867550 +3449 chr4 + 190214555 7180604 7180603 7180671 68 GTCTCTCTCCCTCTCTCTCTCTCTCTCTTTTTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 57829386 57829385 57829453 57829386 57829385 57829453 68 GCTTTTCCCTCTATCCTCCCCTCTCTCTTTTTAAAAATATATGCATGCATATATATAtgtgtgtgtgt .::.:..:.:..x..:::.:.............x.x......::..::..........:.:.:.:.:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -50648782 -43581620 +3125 chr4 + 190214555 7180611 7180610 7180743 133 TCCCTCTCTCTCTCTCTCTCTTTTTATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACATACACATATATACACATATATATACACACATATATGTATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTAT--------------------------------ACACACACGCACACTTCTAAATACATTTATATG-------GTCTGTGCGCATGTGTGTATAT ..:x.....x...........:.x.:.......:.:...--------------------------------........:....:x.x..x.....:x.....:-------:.x.:::.:...:.:....... 39M32D33M7D22M 70/94 74.5% 94/94230402 0.0% 39/94 41.5% -53650919 -40579483 +3181 chr4 + 190214555 7180627 7180626 7180733 107 TCTCTTTTTATATAT--------ATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACATACACATATATAC--ACATATATATACACACAT chr4 + 94230402 7596563 7596562 7596679 7596563 7596562 7596679 117 TCTTTTATGATACATGAGAAATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACAT ...:..x.x...:..--------..:.:x.xx....xx.x.:.x....:x....x.........::....x.:x............x...:.x.x..--x..x:..:...:x..... 15M8I74M2I18M 75/107 70.1% 117/94230402 0.0% 10/107 9.3% -415936 -93814466 +3286 chr4 + 190214555 7180638 7180637 7180711 74 ATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------CACATATATACATACACATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------:....:x...x...:.:.... 53M11I21M 54/74 73.0% 85/94230402 0.0% 11/74 14.9% -16067084 -78163318 +3469 chr4 + 190214555 7180648 7180647 7180708 61 ATATATATATATATATATATATATACACACACACACACACACACACATATATACATACACA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x......x.:.......:....:..:...::.....x....x...:....x:...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -54090127 -40140275 +3159 chr4 + 190214555 7180652 7180651 7180726 75 ATATATATATATATATATATACACACACACACACACACACACATATATACATACACATATATACACATATATATA chr4 + 94230402 54005688 54005687 54005762 54005688 54005687 54005762 75 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATA .:.:....:...x..........:.............x.x.:x.:.x:xxx.:....x.x.xx:......:.... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -46825036 -47405366 +3036 chr4 + 190214555 7180653 7180652 7180692 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 2771571 NA +3191 chr4 + 190214555 7180659 7180658 7180728 70 TATATATATATATACACACACACACACACACACACATATATACATACACATATATACACATATATATACA chr4 + 94230402 74526053 74526052 74526122 74526053 74526052 74526122 70 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA .:..x..xx.x.x....xx.x.:x............:..:x.........x.....:..:.......::. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -67345394 -26885008 +3028 chr4 + 190214555 7180662 7180661 7180712 51 ATATATATATACACACACACACACACACACACATATATACATACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:......x.x....:........:.:....:.:.x..x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -38960194 -55270208 +3028 chr4 + 190214555 7180664 7180663 7180714 51 ATATATATACACACACACACACACACACACATATATACATACACATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:.......::.:..:.....x.:x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -38960192 -55270210 +3530 chr4 + 190214555 7180737 7180736 7180834 98 TGTATATACACACTATATATACACACATATATACACACACACATATATACACAGACACACACACATATATATATACGTATTTATATATTTATATATAT chr4 + 94230402 54963193 54963192 54963283 54963193 54963192 54963283 91 TGTATATTCATAC---AGATGCACACCTATATACACACACAC----AGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .......x..:..---.x..:.....x...............----.xx...:x:.:.x..:...:.:..x......x.x..x.x.x....:...:.. 13M3D26M4D52M 68/91 74.7% 91/94230402 0.0% 7/91 7.7% -47782456 -46447946 +3353 chr4 + 190214555 7180753 7180752 7180847 95 ATATACACACATATATACACACACACATATATACACAGACACACACACATATATATATACGTATTTATATATTTATATATATATTTTTTAAAGCC chr4 + 94230402 29286192 29286191 29286286 29286192 29286191 29286286 95 ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTTAAGATC .......:...:::.x.x:..:.:...x...x.x.x.x...xx.x....x.......:.::.x.x...x........::...x.x.x....:::. 95M 63/95 66.3% 95/94230402 0.0% 0/95 0.0% -22105439 -72124963 +3645 chr4 + 190214555 7190240 7190239 7190370 131 TCCTTCCTTCCTTCCCTTCTCTCTCTCTTTCTTCCTTTC------TCGCTTTCTCTTTCTCTCTCTTTCTTTCTGTCTCTTTTCTCTCTTTCTCCCCTTCCTTTCTCCCTCCCTTCCTTTCCTTCTCCCTTCTTTCC chr4 + 94230402 93283207 93283206 93283341 93283207 93283206 93283341 135 TCCATCCATCGTCCCTTTTTCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTCTCCA--TCCATCCTCTCCCCCTCCACTTGCATTGCCCTTTCTCCC ...x...x..x.:..:..:..::....::.....::::.------..:::.....::.xxx..x:..::.:..::..:x.:x....:.:......x--...x.:...:.:....:.x:..x.x.:x.....::.:.. 39M6I51M2D39M 79/129 61.2% 135/94230402 0.0% 8/129 6.2% -86092967 -8137435 +7429 chr4 + 190214555 7244240 7244239 7244675 436 GCGAAGGCTTCTCCACTTGGAACAAGCTTGGGGGGTGAGTTTCT---CCAGCTCATGCACTCCCCCCGAGTGGTTATTTATCCCCAAAGTCATTCCGAAGATTCATGGGTAAGGGCTTTCAGCGGCCTCCTATTCCCCGCAGATGCCAGCCTGCCTGGTGGAACGCGGCGCTGCTCCTGCAGGAGTGGACGGCGTTCCATCTTCGCC---ACCACACCCGCTGCTCCGTCCCTGCCCCTCGGTCGCTGTTGCATATTAAGTGC-AGGGTGCCCGGC-AGGCCTGCCAAGGCCTTTTCAGGGCCCATGTGTTCTCAGGGGAGATGAAAAGCGTGAAGCAGGC--GTGGTGTGGGTTGGCCTTGGCACTGCACCC--CTGGTTCCAAGCACTGAGGGCCC--CCTG-GAATCCCCCTGGGAAGACTGAAGGCCCAGCAGACCCCACTCTGTGC chr4 + 94230402 82993421 82993420 82993857 82993421 82993420 82993857 437 GTGCAGGCATTTCAACCCAGAGCGAGTTTGTGGCTTGTATTCATAGTCAAATTTTGGCA--------------TCATCTATCTATGAAATTATTCATCAGATTCATGTGTGAATGTTTTTAATGGTTTAATGTGTTCAGCTGATAACAGACTGCATGCTCAAATGTAATGTTGCTCTTTTTAGACTTGATTAGACTCTATCCTTGATTGTGATTTAATGGCTGTTCACAAGCTTGTTCGCTCTTGCTGTTGCATATTAAGTACCAAAGTATCCAGCCAGGTCTGCCAAAGTCTTTCAAGGGACCATGGTTTCTCAAGGGAGATGAAAAGCCCTAAGTAGGCTAGCGTTTTGATTCAGGGCTTGGATTGTGTTTGATTGTTCTCGATCATCAAAGATTTTGTCTGTAAATCCCTCTGGAAATGTTTAAGTGCTCAAAGACCTGTCTCAGTGC .:.x....x.:..x..:::..:.:..:...x..xx..x:..:x.---.x.::.:xx...--------------.:..:....:x::..:.:....xxx.........x..:.:x.:...:.::..::.xx.:.x::.x..x...:x...x....x..x.x:..:.::::.:.....:.x:x:..x.x..:x:x::..:...:.:.x:---:x:x:.x:x....:..xxxxx..xx::.x.xx.:.................:.-.::..::..:..-...:.......:.:....:x....x.....xx......:..............x:x...:....--.:.x.x..:x.::.xx:.x.x.:..:::::--:..x.::.:.x..:::.:.::::--:...-:......:....:..x::.x...xx.:x:x.....:xx...x.... 44M3I12M14D134M3I53M1I12M1I64M2I30M2I23M2I4M1I46M 247/422 58.5% 437/94230402 0.0% 29/422 6.9% -75749181 -18481221 +3125 chr4 + 190214555 7250112 7250111 7250184 73 TGCACCTGTTGTCCCAGCTTCTCAGGAGGCTGAGGCAGGAAAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...x..:......x..::::........x.xx.x:..x...........:.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -68783093 -25447309 +10314 chr4 + 190214555 7261436 7261435 7262034 599 TGAGATTATATTTACTGAATGCA---AATCATGCCATGGACATTTATTTCTCTGCCTTGCTGTTTACTC-CTTCCTTTCTCTCCAGCCCAGATTTATGAAACATATGGATCCTCTCTTTAAACAATCCCTCAAAAGCCCTGGCTTGCAAATTAGTTCCTTGAATGATCAGCTGTACATATCCTGCATTTAATAAATTCAGTTATTAAGGAAGC-TGCAATTGATTATTCAATTACAGCAGATCGGGAATCAGGCTGCTCGGCAAGCTGCCTGAGGCACTGGATTGAGTACTAATAAAAGGAAAAAACACCTCGGGACCGGCCTTTCCACCAACATTCCCTGCTGGTGAGAGAGCTCAGAGGCTGTGCCCTGGGCTTTGCCTGGGGAAGGGGC---CCTGTGGGCATGGTCCCTGATGCCTTCTGACTGTAAAGAAATTAGTGAGCCAGATGACCGAGGATCCTTTCCATGTGATTTGTGTCGACT-GGGAAATTTGCATTATGTATGAAATTTGCCATTTGCATTTCATTCTAAGGAAAACCCTGAACAATATTGATAAATACAT-TTTATGTGTATACAAAATAGATTTGAGCAAGATATGGGGGTTC chr4 + 94230402 83009021 83009020 83009541 83009021 83009020 83009541 521 TAAAACTATGTTATCTAAATTCATACAATTATGTTTAAAA----TATTTTATTACTTCGTTGGCTACTCTCTGTATTACTATATTGTCTAGGCTTTTGAAACACAGAGATCAGCTACTTAAAGAATCCCATCGTGGTCTTAGATTGCAAATTAGCTCCTTGAAATATCAGCTGTACATATTTTGCatttaataaattaatttattaaGGAAGCAAGAAATTGATTATTCAATTACA--------GGCACCAGACACTCTAGTGTGTTAGATGAAGCATGAAGCTG---ATCAATAAAAATATA--------------------TTTCATCAGCATCTCCTAGGAGTGAACTAGCT-----------------GGTTAGAAAGGAACAAAAGCACACCCTTGCAAACCACTCTCTGTGTTTTC------------ACATGATGAGATTGAAACACAAATGTCCTGTGCAATAAATTTGTGTATACTCAGGGAATTTGTATTATGTATGAAA--TGCAATTTGCATTTCACTCTGGAAAAAA--------------AGTTAATACATGTTTGCTTGTGT--------GGGTTGAATAAGATATATGAATCC .:.:.:...:..xx..:...x..---...:...::xx::.----.....:x:.:.:.:.:..x:.....-..x:x..x..x.x:x.:.:..::..x.......:.x:....xx..x:.....x......x:x:x:.:.:.:.x...........:........xx...............::...............x.x.............-x.x...................--------..x.:...:.xx::::.::x.:.:xx...:...:x::::..---.::.......:x.x.--------------------..:..:..:...::...:xx:....:xx....-----------------.x..x.xxx..::x.:::..---..:x..x:x.:x:::.::x:..::...------------.xx.::....x:x..x:xx.:.:x:....x.x..xxx:........xx...-:..:......:.............--...x............:...::::....--------------::.x.......-...::x...:.--------.:x....::.......:x.::.:. 23M3I14M4D25M1I143M1I22M8D41M3D15M20D32M17D20M3I27M12D51M1I24M2D28M14D11M1I11M8D24M 332/511 65.0% 521/94230402 0.0% 98/511 19.2% -75747585 -18482817 +3089 chr4 + 190214555 7293164 7293163 7293246 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........:.::.....:..x.xx.x...xx:.x.........:..x.xx:.x:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -68740033 -25490369 +3370 chr4 + 190214555 7294593 7294592 7294789 197 CTCTGGGCCCAGCCAGTACTTGCCGTGGGCAAATCCTCCTAGTTCACCTTTCCTCCCCCTCTCCCTCTTCCTCTCCCTCCTCCTCCTCCTCCTCCCCCTCATCCTCTCCCTCCCCTCCTCCTCTCCCTCCTCCTCCTCCTCCCCCTCATCCTCTCTCTTCTCCCCAGCTCCCTCCTCCCCCTCCCCCTCCCCTCCCT chr4 + 94230402 92917559 92917558 92917738 92917559 92917558 92917738 180 CCCTGGGCACGAACAGC-----CTGAGGACTAATCCTGAAAGA-CACGTCTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACT--TCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGG-----GTTCATTTCTCCA----TCTGTTCTCTGTCCACTTTCCCTCCCT .:......x.::x...:-----.:.x..:.x......xxx..x-...x.:.:..:.:.:x:x.:xx.x:.x..:....::::x:.:.::.....:.x..--.....:...:..:.:....:....:xxx.x:..:.......:x..x:-----x:..x.:..:...----:..x:..:.:x...x.:.:........ 17M5D21M1D55M2D47M5D13M4D27M 109/180 60.6% 180/94230402 0.0% 17/180 9.4% -85622966 -8607436 +5890 chr4 + 190214555 7294645 7294644 7295078 434 CTCCCCCTCTCCCTCTTCCTCTCCCTCCTCCTC-CTCCTCCTC-CCCCTCATCCTCTCCCTCCCCTCCTCCTCTCCCTCCTCCTCCTCCTCCCCCTCATCCTCTCTCTTCTCCCCAGCTCCCTCCTCCCCCTCCCCCTCCCCTCCCTCCTCCCCTCCTCCTCTCCCTCCTCTCCCTC-------CTCCCCCTCCCCCTCCTCTCCCTCCTCCCCCTCCTC---CTCCTCTCCCTTCT------CCCCAGCTCATTCCTCTC-CCTCCTCCTCTCCCTCCTCC------TCCTCCTCCCCCTCA----TCCTCTCCCTTCTCCCC-----AGCTCC----------------CCCCTCCCCCTCCCCTCCTCTTCCTCCTCCCCTCCTCCTCTCC--CTCCTCTCCCTCCTCTCCCTCC--------TCCC--------------------CCTTCTCCTCTCCCTCCTCCCC-----CCTCCTCTCCCTCCTCCCCTCCTCCTCTCCCTCCTCCCCCTC chr4 + 94230402 30519605 30519604 30520116 30519605 30519604 30520116 512 CTTCCTTTTcttctcttctcttcgcttcgcttcgcttctcttcgcttcgcttcgcttcgcttcgcttcgcttcgcttcccttcccttcccttcccttTCCTTTTCTTTTCT-------TTTCTTCTTCCTGTATACCATGAATGCTTTTTCCCCTCCTCGGTTCTGTCATCTTCCTAATGCTTACTCATGTTTGCCAGCCTAGCCAGCCCTCACCACCGCAATCCCAGCTGCCTTTTTGCAGCCTTTGACTCACTCCTCAAGCCTTGCCTTCTGCCTTCACTGAAGAGTCACATCTCTGCTCAGGGCTGTGCTGACTTCTCCCATGAGAAACTCCACACTACAAGATATGATCTCCCTCGCTCCCCTCTGCTTGCTCTTCCTTGCCTCCTGCCCAGCTCTCCTCCCAACTGTGACCCCACTGCTTGTCCCAGTGACCTCACTGTGTCCTGTTTTCTCATCTCCCTTAGCCCCATCTGCCTCCTCTTCCTTCAGGTCTCTCCCTCTGCCTCCTTCCCCTC ..:..::.::::......:::..x..:.x.:..-..:...:..-.::.x.x..x::..x..:.x..:.x.:..x.:::...:.:.:...:::....:x:.:.:...:....-------.::..:..:..:x.x:x..x:xxx.x.:.::..........xx:..:x..x...:...x-------...x:x:.:x..xx...xx..xx..::.x..x..x.---.:.xx..x....:.------.:::::....:.....xx-...:x:.:...x...:.x.:------..x:x:::.:x....----.x:x..xx........x-----.:....----------------:.:.:.:.x........:x...x...:...::x......x:..--...::.....xx..x.xx.:..--------....--------------------::.....x.......:xx....-----........:...:.xxx:...::.....x......:...... 33M1I9M1I67M7D59M7I36M3I14M6I18M1I20M6I15M4I17M5I6M16I43M2I22M8I4M20I22M5I42M 265/427 62.1% 512/94230402 0.0% 92/427 21.5% -23224960 -71005442 +3552 chr4 + 190214555 7294931 7294930 7295066 136 CTTCTCCCCAGCTC---CCCCCTCCCCCTCCCCTCCTCTTCCTCCTCCCCTCCTCCTCTCCCTCCTCTCCCTCCTCTC------CCTCCTCCCCCTTCTCCTCTCCCTCCTCCCCCCTCCTCTCCCTCCTCCCCTCCTCCTCTCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTC----CCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCT-CCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .....:.:.x.:x.---.x..x.......::.:x...:..:.::...x.:......:.:.....----.....:....------:..:....:...x..xxx:..x:.:..-..x:..x:....:x...x.::::.....::x.. 14M3I47M4D10M6I27M1D33M 86/131 65.6% 140/94230402 0.0% 14/131 10.7% -85622671 -8607731 +3798 chr4 + 190214555 7294965 7294964 7295093 129 CTTCCTCCTCCCCTCCTCCTCTCCCTCCTCTCCCTCCTCTCCCTCCTCCCCCTTCTCCTCTCCCTCCTCCCCCCTCCTCTCCCTCCTCCCCTCCT---CCTCTCCCTCCTCCC--CCTCCTCCCCCTCTCCCTT chr4 + 94230402 85827542 85827541 85827675 85827542 85827541 85827675 134 CCTCTTCCCTTCCACCTCCTCTCACCCCTCCACCCCTAGGGCCTCCTGCCCTTTCTCCTCTTCATTTCCAGCATGTCCCTCCCCACGCAGCCCACTGACCTCACTCTCCTCCTTGCTTCCACCCCCTGCACCTT .:..:...:::..x.........x.:....:x..:.:xxxx......x...:.........:.x.:::.xx.x:x:.:.....:x.x.xx.:.x:---....x.:.......:--.:...x......x:x.... 95M3I15M2I19M 83/129 64.3% 134/94230402 0.0% 5/129 3.9% -78532577 -15697825 +3603 chr4 + 190214555 7294988 7294987 7295127 140 CCTCCTCTCCCTCCTCTCCCTCCTCCCCCTTCTCCTCTCCCTCCTCCCCCCTCCTCTCCCTCCTCCCCTCCTCCTCTCCCTCCTCCCCCTCCTCCCCCTCTCCCTTCTCC-CCAGCTCCTTCCTCTCCCTCCTCCTCTTCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGC-CTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .:..:....:x.x..xx.x.:x::....:....x.-..:::.....:.x.:.....:...:.........:..:::xxx.x:..:.:......x.:xxx:..x:......-:.x.:..::.x::.x.::...::.:..x.. 35M1D74M1I30M 83/139 59.7% 140/94230402 0.0% 2/139 1.4% -85622614 -8607788 +3045 chr4 + 190214555 7295038 7295037 7295109 72 CTCCTCTCCCTCCTCCCCTCCTCCTCTCCCTCCTCCCCCTCCTCCCCCTCTCCCTTCTCCCCAGCTCCTTCC chr4 + 94230402 7218317 7218316 7218388 7218317 7218316 7218388 72 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCTAAGGTTTTTCC ..::.:.:::.:..:::x....:::.:......:..............:x.:.::.::..:x..x.::.... 72M 44/72 61.1% 72/94230402 0.0% 0/72 0.0% 76721 NA +3058 chr4 + 190214555 7305363 7305362 7305412 50 TTTTTTTTTTTTTTTTCTTGGAACACTATTTCTATGGAATACAATCCTGA chr4 + 94230402 36753543 36753542 36753592 36753543 36753542 36753592 50 TTTTTTTTTTTTTTTTCTAGAGAGCTTATTTCTATGGAGTACAATGGTGA ..................x.::.xx:............:......xx... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -29448180 -64782222 +3061 chr4 + 190214555 7314796 7314795 7314852 57 TTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGTTGTTGTTGTTTTTGTTGT chr4 + 94230402 82090602 82090601 82090658 82090602 82090601 82090658 57 TTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTTGT ..:.x::..:.....::..:.x.....::.:...x.........:....x....... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -74775806 -19454596 +3124 chr4 + 190214555 7314796 7314795 7314849 54 TTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGTTGTTGTTGTTTTTGT chr4 + 94230402 82090605 82090604 82090658 82090605 82090604 82090658 54 TTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTTGT ...:x.:.....::..:.x.....::.:......:......:.......x.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -74775809 -19454593 +3166 chr4 + 190214555 7369180 7369179 7369253 74 GTGCACCTGTAATCCCAGCTAGTCGGGAAGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......x.:.::.:......x.xx.x...x::........::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -68664024 -25566378 +3066 chr4 + 190214555 7374114 7374113 7374196 83 TCTTTCTTTCTTTCCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x:.:..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -49997913 -44232489 +7793 chr4 + 190214555 7377441 7377440 7377614 174 AGGCGCTCAACAGACATTCATCACTTCAGCTTCCCCTCTGAAAGCCGAG-ACCACATCCTGATGCATGTTTAAATAGTTCTGCCAAATTTGTTCCATCATTAACTTTCAATCACTGTTAATTTTAGACAGGGCTCTTAATTCAAGTTTTTTGTCTTTGTCAAGTTGATGGAGATG chr4 + 94230402 83117431 83117430 83117604 83117431 83117430 83117604 174 AGGTCTCTAGCAACCATTTATCACTTAAATTTCACATCTTATAGCTGAGGACCAAATTGTGTTACATGTTAGAATAGTTCTGCCAAATTTGATCTATCATTAACTTTCATTTGTTGATAATTTGA-ACATGAATTTTTATTTAACTTATGCATCTTTGTCAACTTGATGGAAATG ...:x:::.:..:x....:.......x.::...x.x...x.x...:...-....x..:x..x.:......x:...................x..:..............x.:::..x......x.-...x.:x.:..x...:..x..x.x::..........x........:... 49M1I75M1D49M 128/173 74.0% 174/94230402 0.0% 2/173 1.2% -75739990 -18490412 +4812 chr4 + 190214555 7396270 7396269 7396359 90 TTTCTGTTAACACCACAGGTGATCTTGATCCTGACGAAGTACTACCACGCAGACATGGGGAAGGTTCTGGAAAGTTCTCTGTGGCGGTAA chr4 + 94230402 83145271 83145270 83145360 83145271 83145270 83145360 90 TTTTCGTTGTCTTTTTAGGTGATCCTGATTCTTACCAAGTACTATCATACTGACATGGGAAAAGTGCTGGAGAGCTCTTTGTGGAGGTAA ...::...:x.x::x:........:....:..x..x........:..::.x........:..:..x.....:..:...:.....x..... 90M 66/90 73.3% 90/94230402 0.0% 0/90 0.0% -75749001 -18481401 +3035 chr4 + 190214555 7410935 7410934 7410978 44 CTCTTCTCTCCATCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 5672118 5672117 5672161 5672118 5672117 5672161 44 CCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGA .:.::.:.:...:...................x.:......... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 1738817 NA +3213 chr4 + 190214555 7430363 7430362 7430435 73 AAAACAAACAAACAAACAAACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTC chr4 + 94230402 33725402 33725401 33725467 33725402 33725401 33725467 66 AAAATAAACAACTAAGCAAACAAACAAAAACAATGCAACAACAACAAA-------AACCACCACGATGTCTTC ....:......x:..:.............xx..x:.............-------:.......x.x:x.:... 48M7D18M 52/66 78.8% 66/94230402 0.0% 7/66 10.6% -26295039 -67935363 +3011 chr4 + 190214555 7438623 7438622 7438689 67 TCCCTTTCTCCTCTCTCCCTCCCTGCCTCTCTTTTTCCTTCCTTCCTCTTTCCTTTTTTCTTTTTTA chr4 + 94230402 6792851 6792850 6792917 6792851 6792850 6792917 67 TCCCTTCCTCCTCTATCCCCCTTTCACTCCCCTTTCTCTTCAGTTTTCTGTCGTCTTCTCATCTTTA ......:.......x....:.::.xx...:.:...::....xx.::...x..x.:..:..x.:.... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 645772 NA +4039 chr4 + 190214555 7448765 7448764 7448900 136 CTTTCTCTCCCCTCCATCCCGCCCTCCCTCCCTTCCTCTTTTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTTC----CCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCT--CCCTCCCTCCCTCCCTCCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTG--CTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC ...::....:x:x.:.x.x.xx:.:....::..x...:...:.:...x..:......:...:.:.:.....:..----.x...::......:x--..xxx.:.x..:....x...x...::--:..x.::.........x.. 74M4I15M2D26M2I19M 88/134 65.7% 140/94230402 0.0% 8/134 6.0% -85468837 -8761565 +3923 chr4 + 190214555 7448796 7448795 7448916 121 CTTCCTCTTTTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTC------CTCCCTCTCTTCCTCCC---TCCCTCCCTCCCTC----------CCTCCCTCCCTCCCTGCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC ....:...:.x:x..xx.x..x....:.::.:.x:..:...:.:...x.........:...::..:.:....------.x:.:....:....x.:---.:.x.::....x..----------..x.::............ 72M6I17M3I14M10I18M 83/121 68.6% 140/94230402 0.0% 19/121 15.7% -85468806 -8761596 +3061 chr4 + 190214555 7448833 7448832 7448896 64 CTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCC chr4 + 94230402 77152075 77152074 77152138 77152075 77152074 77152138 64 CTTTTGCATCTCTGCCCTCTCTCCTCCCTGAGTAACTCTCTCTCTCTCTCTCCCCCTCCCCCCC .....x.x.....x..::.:::.......xxx.xx...:......::...:.:.......:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -69703242 -24527160 +4071 chr4 + 190214555 7448957 7448956 7449089 133 CTCCCTTCCTGTCTTTTCCCTCTCTCCCTCCCTTCCTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTC------CTCCCTCTCTTCCTCCC---TCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTC--TCTGTCCACTTTCCCTCCCTGCC ..:.:.::....x:.xx.x.:x..:....::..x...:...:.:...x.........:...::..:.:....------.x:.:....:....x.:---.:.x.::....x..:x.:.--:.:x...x.::.........x.. 72M6I17M3I19M2D23M 86/131 65.6% 140/94230402 0.0% 11/131 8.4% -85468645 -8761757 +3061 chr4 + 190214555 7448994 7448993 7449057 64 CTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCC chr4 + 94230402 77152075 77152074 77152138 77152075 77152074 77152138 64 CTTTTGCATCTCTGCCCTCTCTCCTCCCTGAGTAACTCTCTCTCTCTCTCTCCCCCTCCCCCCC .....x.x.....x..::.:::.......xxx.xx...:......::...:.:.......:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -69703081 -24527321 +4662 chr4 + 190214555 7449113 7449112 7449347 235 CTTCCTCCCTCCCTCCCTCCC----TCCCTTCCTCTTTTCCCTCTCTCCCTCCCTTC-CTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCC--------TTCCTCCCCTTTCTTCCCTTCTCTCTTCCTTCC--CTTCTCCCTTCCTTCTTCC chr4 + 94230402 36929154 36929153 36929403 36929154 36929153 36929403 250 CCTTTTCCCTCCATTTCCCCTAGAATCCCAACTTTTTCCACGTTTTTCTCTTCATTCTCACATTTTCCACCCTTTTCCCCAACATTCCCAATTTTTTTCCACCATTTCCCCTGCTTTCCCACCTTTTCCCACATTATCCCCTACATTCTTACATTTTCCCTACCTTTTCTCCTACGTTCCCACGTTTTCTCGTAAATTCCAAACATTTCTTCCTTTTTCCCTACATTCCCACTTGTCCCACCTTTCCCCC .:.::.......x.::.:..:----....xx.:.:..::x.x.:.:..:..:.x...-.x.x...:..x.:...:::...xx.x.:..:xx:.:::....x..x.:..::.:x.::....x..:.::.:.x.x::x....::x.x::..:x.x:::.....x....::::...x.x....:x.x.:::--------....xxx.x........:..:..:..x.x....--...x....x:.:...::.. 21M4I32M1I130M8I33M2I19M 136/235 57.9% 250/94230402 0.0% 15/235 6.4% -29480041 -64750361 +4780 chr4 + 190214555 7449130 7449129 7449382 253 TCCCTCCCTTCCTCTT----TTCCCTCTCTCCCTCCCTTCCTCTTTTCCCTCTCTT-CCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCCTTTCTTCCCTTCTCTCTTCCTTCCCTTCTCCCTTCCTTCTTCCCTCCTTTCCTTCCT-TCCTTTCTCTCCCCTCCCTCC chr4 + 94230402 36929159 36929158 36929409 36929159 36929158 36929409 251 TCCCTCCATTTCCCCTAGAATCCCAACTTTTTCCACGTTTTTCTCTTCATTCTCACATTTTCCACCCTTTTCCCCAACATTCCCAATTTTTTTCCACCATTTCCCCTGCTTTCCCACCTTTTCCCACATTATCCCCTACATTCTTACATTTTCCCTACCTTTTCTCCTACGTTCCCACGTTTTCTCGTAAATTCCAAACATTTC--------TTCCTTTTTCCCTACATTCCCACTTGTCCCACCTTTCCCCCGCCTCC .......x..:.:.:.----.:..xx..:.::.:x.x..::...:...x:....x:-::.:..x....::::...xx.x....:xx:.:.:....x..x.::.:..:x.::....x..:.::.:.x.x::x....::x.x::..:x.x.::.....x....::::...x.x....:x.x:.....:x:xxx:..:xxx.x..:.--------......:......x.x....:x.:.-...:x:..:.....:x..... 16M4I36M1I147M8D25M1I21M 142/245 58.0% 251/94230402 0.0% 14/245 5.7% -29480029 -64750373 +4355 chr4 + 190214555 7461090 7461089 7461275 186 ATCAGAGGACATTAGAGA-----GGAGGCC-----ATGTCAGGACTGAGGATGCGGTGATTCGATCAGTGATGAGCTC--TCTCCCCAAATTAAATTATTCATCATTTCCTGGTCCTTAATAAAATAATTACTGCCTTCGCTCTTTCCCTCTGCCGTCACAGGACTTGCTTCCATCTCTGAACGTGAAAGATGCTGTG chr4 + 94230402 83201505 83201504 83201697 83201505 83201504 83201697 193 ATTGAGAGATATTAAAGACAACTGGAGTTCTAATGACGTCAGGCCTGAAAAAATGATTATTCTATCAGTAGAACATTTAATTTCCAAAAATTAAATTATGCCTTATTTCTAGATTTGTAATAAAATAATTAATGTCT--GGACTTTCTCATTATCGAC---TACTTTGCTCCAATTTCTTTGTATGAAAGGGGCTTTG ..:::::..:....:...-----....x:.-----.:......x....::.x::.:.x....x......::x:x::.:--.:...xx............x.x.:.....:x.:.::x..............x..:..--.xx.....:.x:.::..x.---x:x:.....:.x..:...xx:::......:x...x.. 18M5I7M5I43M2I57M2D19M3D37M 117/181 64.6% 193/94230402 0.0% 17/181 9.4% -75740415 -18489987 +3061 chr4 + 190214555 7508328 7508327 7508370 43 CTGAGGATGCTGAGATCTCAGGCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53275387 53275386 53275429 53275387 53275386 53275429 43 CTGGTGATGCTGAGATCTAAGGCTTTTGTTTTTTATTTTTTTT ...:x.............x........x......x........ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -45767059 -48463343 +3250 chr4 + 190214555 7522591 7522590 7522683 93 CCTACTCCTCTCCTGCCTCTTCCCCTTCCCCTTTTCCCTCCCTCCTCCTCCCTCCTTTTCTCCCTCCTTCTTTCCTCCTCCCTTTCTTCCCTC chr4 + 94230402 60843965 60843964 60844056 60843965 60843964 60844056 92 CCTACTTGTTAAATGCCATATCCCTTTCTCTTGTTCCTTTCCTCTTGCTCCCTCGCTTTTTTCCATTTTC-TCCCTCCTGTCCCTTTGCTCTC ......:x.:xxx....x:x....:...:.:.x....:.:....:.x.......x:...:.:..x::...-.:......x:.::.:.x.:... 70M1D22M 60/92 65.2% 92/94230402 0.0% 1/92 1.1% -53321374 -40909028 +3345 chr4 + 190214555 7522743 7522742 7522870 128 CTTTCCTCTCCCTCCTTTTCCTCTTCCTTCCCTCCTTTATCCTCCCTCCCTTCCTCCTCCCTTTTCTCTCCCTGTCTCCCTTCTCCCTCCCTCCTCCCCCCACTTCTTCCTCCCTTTTCCCTCCCTTT chr4 + 94230402 85827543 85827542 85827668 85827543 85827542 85827668 126 CTCTTCCCTTCCACCTCCTCTCACCCCTCCACCCCTAGGGCCTCCTGCCCTTTCTCCTCTTCATTTCCAGCATGTCCCTCCCCACGCAGCCCACTGACCTCACT--CTCCTCCTTGCTTCCACCCCCT ..:.:.:..:..x...::..::x::...:.x.:...xx:x.....:x.....:......:::x..::.xx.x....:.:.::.x.x.xx..:x..xx..:....--:......:.x:.:..x...::. 104M2D22M 74/126 58.7% 126/94230402 0.0% 2/126 1.6% -78304800 -15925602 +3132 chr4 + 190214555 7523038 7523037 7523101 64 CCTCCTCCCTCCTTCCTCCCCTTCTCTCCCCTTTCCTTCCTCTTC----CCATTTCCCTCCTCCCTCT chr4 + 94230402 83645378 83645377 83645445 83645378 83645377 83645445 68 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACT ...x........:....:.x:..:..:...:..:.:.....:.:.----..:x......:....:x.. 45M4I19M 47/64 73.4% 68/94230402 0.0% 4/64 6.2% -76122340 -18108062 +3139 chr4 + 190214555 7528381 7528380 7528444 64 CTAGGCACTGGCAGCTGCTACGTTTTTTTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTGTTTTT chr4 + 94230402 41855225 41855224 41855288 41855225 41855224 41855288 64 CCAAACGCTGTCTGCTGATATCTGTTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTT .:.::.:...x.x....x..:x.x....x.....xx.:.x.....................x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -34326844 -59903558 +3245 chr4 + 190214555 7528403 7528402 7528450 48 TTTTTTTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTGTTTTTAGACGG chr4 + 94230402 61024693 61024692 61024740 61024693 61024692 61024740 48 TTTTTTTTTTTGGTATTGGTTTTTTTTTGTTTGTTTGTTTTTAAGAGG ............x.:...x.....x..................::x.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -53496290 -40734112 +3134 chr4 + 190214555 7528408 7528407 7528443 36 TTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 72610688 72610687 72610723 72610688 72610687 72610723 36 TTTTTTGTTGTTGGTTTTTGTTTGTTTGTTTGTTTT .............x...................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -65082280 -29148122 +6992 chr4 + 190214555 7531520 7531519 7531636 117 TTTCCCCCAGGTCATCAGATTTCGGGACGTCCTACACCAAGCTCACCCTCCAGCCTGGTGTCACCACCGTCATCGACAATTTCTACATCTGCCCGACCAACAAGAGGAAGGTAGGTG chr4 + 94230402 83276954 83276953 83277070 83276954 83276953 83277070 117 TTTCTTACAGGTCCTCAGATTTTGGGACGTTATACACAAAGTTGAATCTACAGCCTGGGATTGCCACTGTTATCGACAATTTCTACATTTGTCCCACCAACAAAAAAAAGGTATGTG ....::x......x........:.......:x.....x...:.x.x:..x........x:.::....:..:.................:..:..x........:.::......x... 117M 91/117 77.8% 117/94230402 0.0% 0/117 0.0% -75745434 -18484968 +3271 chr4 + 190214555 7550086 7550085 7550190 105 GGGAGCTGGTGTTTTTTTTTTTCCGTGTGTGTGTGTGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCAAGCAGCTG-AGGCTGCAAATGTTT chr4 + 94230402 37981893 37981892 37981993 37981893 37981892 37981993 101 GAGAATTGGTATTCTATCTTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTGC-----TTTCAAACAGTGACAATCTAAAAGTGTTT .:..::....:..:.x.:...x::.x..x.x...xxx.:.x.....................x...x.x..:-----......:...:x:-.:x..:x..:..... 72M5D13M1I15M 69/100 69.0% 101/94230402 0.0% 6/100 6.0% -30431807 -63798595 +3910 chr4 + 190214555 7580350 7580349 7580419 70 CATGGTGGTGCACGTTTGTAATCCCAGCTACTCAGGAGGCTGAGCCATGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::...........--...:.:.........::::..........x..x...x.:........::.:.. 15M2D53M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -68452847 -25777555 +3139 chr4 + 190214555 7591139 7591138 7591203 65 ACTCTTCCTGCTTCTTTCTGTGTCCTTCTTCCACTTCCTCTTCCTCCTCCCACCTTCTCCTTCTT chr4 + 94230402 29058909 29058908 29058973 29058909 29058908 29058973 65 ACTTTTCCAGTCTACTTTTATTTTTTTCTCTTCTGTCCTCTTCCTTCTCCCTCCCTCTCCTTCTT ...:....x.::.x:..:.:.x.::....:::x:x..........:.....x..:.......... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -21467770 -72762632 +3212 chr4 + 190214555 7599800 7599799 7599845 46 CTGTGGGGTGGGTTTTCTTTTTTCTTTTTTTTTTTTTTTATTGAGA chr4 + 94230402 33908496 33908495 33908541 33908496 33908495 33908541 46 CTGTGGGGGGTGTTTTTTCTTTTCTTTTTGTTTTTTTTTAATGAGA ........x.x.....:.:..........x..........x..... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -26308696 -67921706 +3078 chr4 + 190214555 7601612 7601611 7601665 54 CTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTTTAACATAGCTTTGTTTTTTGTT chr4 + 94230402 64930454 64930453 64930507 64930454 64930453 64930507 54 CTTTCACAAAAAAAAAAAAAAAAAGAAAAGCTGAAGCTTGCTCTGTTCTCTGCT ..:...x.................:.....:.x..xx.x...:....:.:..:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -57328842 -36901560 +3394 chr4 + 190214555 7609171 7609170 7609311 141 TCTGAACTTGGTTTTGTTGTTGTTGTTGTTTTTCATTTGTTTGTTTTTCCTTTTCAAGGTGAGTAACAATCCT-TGCCTTGCAGAACTTTGAAAGGAATACATTGGTTAAAATCTTTCAGTGCCTTACATACAGTAAATTCT chr4 + 94230402 7230420 7230419 7230556 7230420 7230419 7230556 137 TCTGTGTTTTTTTTTTTTGTTGTTGTTGTTTTACATCTCTATATTTTTTCTTTTTAACCTTATTGACAAAACTGTGTCTTTCTGTATGAAGTACTGAACATATT--TTAAA---TTTTAACACCGTATAAGGAGTGACCTCT ....x::..xx....x................x...:.x.x.:.....:.....:..xx.x.x.:....xx..-..:...x.x.x.:xxx.x.xx...:.:...--.....---...:.:::..x..:.x:x...:.x:... 73M1I30M2D5M3D28M 91/136 66.9% 137/94230402 0.0% 6/136 4.4% 378751 NA +3150 chr4 + 190214555 7609174 7609173 7609236 63 GAACTTGGTTTTGTTGTTGTTGTTGTTTTTCATTTGTTTGTTTTTCCTTTTCAAGGTGAGTAA chr4 + 94230402 35905414 35905413 35905476 35905414 35905413 35905476 63 GAATTTTATGCTTTTGTTGTTGTTGTTTCTCATTTGTTTTTTTTTTTTTCTTTAGACTAGGAA ...:..x:.x:.x...............:..........x.....::..:.:x..::x..x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -28296240 -65934162 +11192 chr4 + 190214555 7638317 7638316 7638501 185 TTGTGTTTCAGGTCATCCTTGTCAGCTCCTCACTCAGTGACCGGGACCAGAGCCTATTCCTCAGCGCAGACGAAGGCGCCACCTTTCAGAAGCAGCCCATTCCCTTCTTCGTGGAAACTCTGATTTTCCACCCTAAGGAGGAGGACAAGGTCCTCGCCTACACAAAGGAGAGCAAGGTAAGATAT chr4 + 94230402 83398224 83398223 83398408 83398224 83398223 83398408 185 TTGTCTTTTAGATCATTCTTGTAAGTTCTTCCCATAATGACCGTGACCAAAGCCTTTTCATAAGCACAGATGAAGGAGCTACATTCCAGAAACAGCCCATTACTTTCTTTGTGGAAACTCTTCTCTTCCACCCAAAAGAAGAAGACAAAGTACTCGCTTACACAAAGGAAGGCAAGGTAAGCTGT ....x...:..:....:.....x..:..:..x.x:.:......x.....:.....x...x.x...:....:.....x..:..x..:.....:.........x.:.....:...........xx.:........x..:..:..:.....:..x.....:...........::..........x.:. 185M 145/185 78.4% 185/94230402 0.0% 0/185 0.0% -75759907 -18470495 +3435 chr4 + 190214555 7650690 7650689 7650758 69 CCCCGCCTCCCTCTCC-AGCC-CTCTCTCCCCGCCCCGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCC chr4 + 94230402 1610902 1610901 1610972 1610902 1610901 1610972 71 CCCCCCCTCCCGTGCTGAGCCGCCCTCTCCCCGCAGCGCACGGCCCAGCCCAGCCCGGCCCAGGCGGGCCC ....x......x:x.:-....-.:..........xx...x.:..............:......x.x:.... 16M1I4M1I49M 55/69 79.7% 71/94230402 0.0% 2/69 2.9% 6039788 NA +4615 chr4 + 190214555 7654113 7654112 7654218 106 TTTCTTTTTTCTGCCCTAAAGCTCTACGTGTCATCTGACTTGGGGAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTGGTGAGAGCACT chr4 + 94230402 83402427 83402426 83402532 83402427 83402426 83402532 106 TTTTCTTGTTTTGTTTTGTAGGTTTATGTATCCATTGACTTGGGGAAAAAGTGGGTCCTTCTTCAGGAACGTGTTTCAAAAGATCATATTTTTTGGTAAGAAAACT ...::..x..:..:::.:x..x.:..:..:..xx:...................::x.....x..:..:..x..xx.x.....:..::.x..:....:...:x... 106M 72/106 67.9% 106/94230402 0.0% 0/106 0.0% -75748314 -18482088 +6365 chr4 + 190214555 7664345 7664344 7664489 145 TCCTGTAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTGCAGGACGATTACATCTTCTTTAAGGTAAGGTTGC-TTCTGGGG chr4 + 94230402 83414083 83414082 83414228 83414083 83414082 83414228 146 TCCCTCAGGTTATCGTTACATCACTTGCCAGATTCAAAATTGTTCTGATAAGACAATGACAGTCCAGTTTGCTGGTGGCACTGATCGGGATTCCCTGACTGTGCAGGATGACTACATATTCCTTCAGGTAATGCCACATTCTGGGG ...:x:..:..x...x...:....:...xx:..:..x.....:..:..x....::x......:..x:..:..x..:xx..:...:.:x.:x..:.....:........:..:.....x...:..x......x.:::.-........ 137M1I8M 101/145 69.7% 146/94230402 0.0% 1/145 0.7% -75749738 -18480664 +6658 chr4 + 190214555 7667086 7667085 7667218 133 ATCAAGCCTCTCAAAAATGTGTTTCTTCCCCCGGTTAGGCAACATCAGCAAACCAGACAAAATACTACGTCTCTTATCGTCGAAATGAATTTGTCCTGATGAAGCTGCCGAAGTATGCATTGCCAAAGGTAAG chr4 + 94230402 83418348 83418347 83418479 83418348 83418347 83418479 132 ATCAACTACCACACAATTCTGTTT-TTCCTTTGTATAGACAACATCAGCAAATCGGACCAAGTATTATGTATCCTACCGTCGAAATGGCTTTGTGCAGATGAAATTGCCAAAATATGCCTTGCCAAAAGTAAG .....x:x:.x..x..x.x.....-....:::.xx...:.............:.:...x..:..:..:..x..:..:..........:x.....x.x......::....:..:.....x........:..... 24M1D108M 99/132 75.0% 132/94230402 0.0% 1/132 0.8% -75751262 -18479140 +10479 chr4 + 190214555 7676041 7676040 7676234 194 TCCCCACAGGATCTGCAGATCATCAGCACGGACGAGAGTCAGGTGTTCGTGGCGGTGCAGGAGTGGTACCAGATGGACACCTACAACCTGTACCAGTCGGACCCACGGGGCGTGCGCTACGCGCTGGTGCTGCAGGACGTGCGCAGCTCACGGCAGGCGGAGGAGAGCGTGCTCATCGACATCCTGGAGGTGGG chr4 + 94230402 83429285 83429284 83429478 83429285 83429284 83429478 194 TTCCTACAGGATTTACAGATAATCAGTACAGATGAAAACCAGGTATTTGTGGCTGTTCAGGAATGGTACCAGACAGACACATACAATCTGTACCAGTCTGACCCACAAGGCATTTACTACTCCATCCTGCTGGAGAACGTCCGGAGCACAAAGCAGCCAGAAGAGAATGTCCTGATAGATATTCTGGAGGTAGG .:..:.......:.:.....x.....:..:..:..:.::.....:..:.....x..x.....:..........::.....x.....:...........x.......::...:.x::....x.xx.xx.....x..:....x..x...x..x:....x.:..:....::..x..x..x..:..:........:.. 194M 144/194 74.2% 194/94230402 0.0% 0/194 0.0% -75753244 -18477158 +11235 chr4 + 190214555 7682721 7682720 7682915 195 CCTTCTTTTATTTTTGTCCCAGGTCAGAGGGGTGAAAGGAGTCTTCCTGGCAAACCAAAAAATTGATGGGAAAGTGATGACGCTTATAACCTACAACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTGTAAGTA-------CCTCTGCTCACATCACACA chr4 + 94230402 83435306 83435305 83435507 83435306 83435305 83435507 202 CTTTTTCTCATTTATGCTTCAGGTCAGAGGTGTAAAAGGAGTCTTTCTGGCCAACCAGAAGATTGATGGGAAAGTTGCAACTCTAATAACCTACAACAAAGGCCGTGACTGGGATTTTCTAAACCCTCCAGACATTGATATGAATGGAAAACCTACCAACTGCAAACCTGTAAGTGGTCCCATCCTCTGTCTGAATTGCATA .:..:.:.:....x..:::...........x..:...........:.....x.....:..:..............x:::..x..x..............:.....:..........x:..:.:x..x..x::...x..:..............x...........:.........:-------......::::x..::..:. 176M7I19M 151/195 77.4% 202/94230402 0.0% 7/195 3.6% -75752585 -18477817 +6922 chr4 + 190214555 7689472 7689471 7689591 120 TCTCTTCCTTGC--------AGCCAGACTGCCACCTGCACCTGCACCTGCGCTGGGCAGACAACCCCTACGTATCAGGCACCGTGCACACCAAGGACACCGCCCCAGGCCTCATCATGGGTGCAGGTA chr4 + 94230402 83436730 83436729 83436857 83436730 83436729 83436857 128 TCTCTTCCTTTTCCCCCACAAGCCTGATTGCTACCTTCACCTCCATCTCCGCTGGGCAGATAATCCATATGTGTCAGGAACCGTCCATACAAAGGATACTGCACCAGGACTCATCATGGGAGCAGGTA ..........x:--------....x..:...:....x.....x..:..x...........:..:..x..:..:.....x.....x..:..x.....:..:..x.....x...........x....... 12M8I108M 97/120 80.8% 128/94230402 0.0% 8/120 6.7% -75747258 -18483144 +5965 chr4 + 190214555 7697107 7697106 7697279 173 CGTTGCTTGAGGTTTTTCCATGCTCAGACTTGTTAAAGGGGTAAAGCTGGACGATCCTAAGGGTAGTACTGCCCCTTTTCTT---------TTGGACCAGGTAACCTGGGCTCACAGCTGGTGGAATATAAAGAAGAAATGTACATCACGTCAGACTGTGGTCACACCTGGCGGCAGGTAAG chr4 + 94230402 83444047 83444046 83444227 83444047 83444046 83444227 181 CATCATCTGAGGCTTGTTCTCACTCTGACTGGTGTCAGGACTATTTCCAGTCTCTCTTGTTAATTGGG-TGCCCCCTTCTTTCCTTATGTATTGTGACAGGTAACCTGGGATCCCAGTTGGTTGAGTATAAAGAAGAAATGTACATCACATCTGACTGTGGGAAGACATGGCGCCAGGTAGG .:.::::.....:..x.:.x::...x....x..xxx...:x..xxx.::.x.xx..:.:xx::.x.x:-......:..::..---------...x:x.............x..x...:....x..:.......................:..x........xx.x..x.....x......:. 68M1D13M9I91M 118/172 68.6% 181/94230402 0.0% 10/172 5.8% -75746940 -18483462 +7480 chr4 + 190214555 7703268 7703267 7703376 109 TCTCCTCTGCAGGTGTTTGAGGAAGAGCATCACATCCTGTACCTGGACCACGGCGGCGTGATCGTGGCCATCAAAGACACCTCCATCCCTTTGAAGATCCTCAAGTAAT chr4 + 94230402 83450778 83450777 83450886 83450778 83450777 83450886 109 TCTGATTTGTAGGTCTTTGAAGAAGAGCATCACATCTTGTACCTGGACCATGGTGGAGTTATTGTGGCCATCAAAGATACCTCTATCCCACTGAAAATACTCAAGTAAT ...xx.:..:....x.....:...............:.............:..:..x..x..:..............:.....:.....x:....:..x.......... 109M 91/109 83.5% 109/94230402 0.0% 0/109 0.0% -75747510 -18482892 +7107 chr4 + 190214555 7704166 7704165 7704292 127 TCTCCTGGCAGGTTCAGTGTGGACGAGGGCCTCACCTGGAGCACGCACAACTTCACCAGCACCTCGGTGTTTGTGGACGGGCTGCTGAGTGAGCCAGGGGACGAGACGCTGGTCATGACGTGAGTGC chr4 + 94230402 83452425 83452424 83452551 83452425 83452424 83452551 127 TTTTTTTACAGGTTCAGCATAGATGAAGGCCAGACTTGGAGTACACATAATTTTACAAGCACCTCAGTCTTCGTAGATGGATTACTTAGCGAACCTGGAGATGAGACACTGGTCATGACGTAAGTGC .:.::.x:.........::.:..:..:....xx..:.....:..:..:..:..:..x........:..x..:..:..:..::.:..x..:..:..x..:..:.....:.............:..... 127M 92/127 72.4% 127/94230402 0.0% 0/127 0.0% -75748259 -18482143 +7666 chr4 + 190214555 7712730 7712729 7712855 126 CAGGGTCTTTGGCCACATCAGCTTCCGCTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGCGGCGAGGAGGACTACAGCTCCTGGGAGCTCTCCAACCTGCAGGT chr4 + 94230402 83464357 83464356 83464482 83464357 83464356 83464482 126 CAGAGTTTTTGGACACATCAGTTACCGCTCGGACTGGGAACTGGTGAAAGTGGACTTCAGGCCATCCTTCTCCAGGGAGTGCACCGAGGATGACTATGAATCTTGGGAGCTCACAAATCTACAGGT ...:..:.....x........:.x......x..:.....:.....x..:.........x....x..x.........x.....:x......x.....:::x..:.........x.x..:..:..... 126M 100/126 79.4% 126/94230402 0.0% 0/126 0.0% -75751627 -18478775 +7493 chr4 + 190214555 7714218 7714217 7714378 161 TACCCTGATGTTCCTGCTGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAAAAGAAAGTCCACGTCCTGGTGCATCAAGGGGAGGAGCTTCACGTCGGCGCTCACGTCCCGCGTGTGCGAGTGCCGGGACTCGGACTTCCTGTGGTGAG chr4 + 94230402 83466513 83466512 83466666 83466513 83466512 83466666 154 TGCTTTGATGTTT-------AGGGTGATCGTTGCATCATGGGTCAACAGAGGAGCTTTCGGAAAAGGAAGATTTCATCATGGTGCATTAAAGGGAGAAGTTTCACTTCAGCTCTAACATCCAAAGTCTGTGAATGTGCAAACTCTGATTTCTTATGGTGAG .:.::.......:-------....:..:..:..:........:..:.....:..:..:........:...x::x.:..x........:..:.....:..:.....x..:..x..x..:...x:x..x..:..:..:xx::....x..:...:.:....... 13M7D141M 110/154 71.4% 154/94230402 0.0% 7/154 4.5% -75752295 -18478107 +7373 chr4 + 190214555 7718009 7718008 7718185 177 CAGGTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTGGGGTGGACATGCAGCAGAGTCAGGTGCAGCTGCAGTGCCCCCTCACGCCGCCCCGGGGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGCCGTGCGGCCTGGAGAGGACGTCCTGTTTGTGGTGCGGCAGGAGCAGGT chr4 + 94230402 83468923 83468922 83469099 83468923 83468922 83469099 177 CAGGTACAGGAAAGTTGTATCTAATGTGTGTGAAGGTGGTGTAGACCTGCAGCAGAACTTAGCACAGCATTTGTGTCCATTGATTGCTCCCAAGGGACTTCAGATCAGCATCAGAGGAGAAAGCCTGGCTGTTAAGCCTGGGGAGGACATCACCTTCGTTGTCAGACAAGAGCAGGT .......x.......x..:..:..:........:.....x..:...x.........:::x:.::....xx:x...:..x:.x.:xx.x...x:...x..x...:.......:x:...x..::xxx....:..xx:......:......:..x:x..:..x..xx.:..:........ 177M 120/177 67.8% 177/94230402 0.0% 0/177 0.0% -75750914 -18479488 +3698 chr4 + 190214555 7721330 7721329 7721408 79 GTGATGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTCAAGAATCACTTGAACCTGGGAGTCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--....:.:...........::........x.:::x...x..........::.:..::xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -68311871 -25918531 +3111 chr4 + 190214555 7722917 7722916 7722986 70 CTCGTGCCCCTGGTGCCGGCGAGGGAGGAAGAGGGAAGGGGAGGAGAGGAGGAAGGGAGGGAGGGAGAAT chr4 + 94230402 949297 949296 949366 949297 949296 949366 70 CTGGAGCATCGGATGCAGACAAGACAGGCTGGGGGAAAGGGAGGGGAGGAGGGAGGCGGGGAGGAAACAT ..x.x..x:.x.:...x.:.:..:x...xx.:.....:......:.......:...x:......:.:x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 6773620 NA +11542 chr4 + 190214555 7723686 7723685 7723889 204 TTTCTCTGCAGGGTGATGTCCTGACTACCAAGTACCAGGTAGACCTTGGGGACGGCTTCAAGGCCATGTACGTGAACCTTACACTGACCGGGGAGCCCATCCGGCACCGCTACGAGAGCCCCGGCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTTGTCCAGGTCAACTGTAAGT chr4 + 94230402 83472518 83472517 83472721 83472518 83472517 83472721 204 TCTCCTTTTAGGGTGATATATTGAATACCAAGTACCAGGTGGATCTTGGCGATGGATTTAAGGCAATATATGTGAACCTTACAATGACTGGGGAACCCATCCGTCACCGTTATGAGAATCCTGGGATTTACCGTGTCTCGGTGAAGGCTGAAAACGTTGCTGGACATGATGAGTCTGTAGTGTTCGTCCAAGTCAACTGTAAGT .:..::.x:........:.x:...x...............:..:.....x..:..x..:.....x..:..:............x....:.....:........x.....:..:....::..:..x..:.....:..x..x..x.:...x..:...::x..x..x..:......x.x..:x.x..:.....:............. 204M 155/204 76.0% 204/94230402 0.0% 0/204 0.0% -75748832 -18481570 +6707 chr4 + 190214555 7728332 7728331 7728475 144 TTCTCTGCGTCTTTCCAGATCAATTTCAAGTCATGCCTCTGCAGTTTTCCAAGGAGCTGGATGCCTACAACCCCAACACCCCTGAGTGGAGGGAAGACGTGGGCCTGGTGGTCACCCGGCTGCTCTCCAAGGTGTCCACCCAGA chr4 + 94230402 83480475 83480474 83480618 83480475 83480474 83480618 144 TTCTTTCTGTCTTTCTAGATCATTTTCATGTTCTTCCTCTGAAGTTTACCAAACACCTGGACATGTACAACCCCGACATACCAGAGTGGAGGGAAGATATAGGGCGCGTAGTAACACGACTTCTTGCAAAGGTGCTCTTTCAGA ....:.x:.......:......x.....x..:x.x......x.....x....:x.x.....:::x.........:...:x..x..............::.:..x.xx..:..x..x..:..x..:x.x......::.x::.... 144M 103/144 71.5% 144/94230402 0.0% 0/144 0.0% -75752143 -18478259 +5844 chr4 + 190214555 7734261 7734260 7734379 119 TTTGCTTGCAGGTGCTGAGCAGCTGGGCGGCGGTGGCGGCTACTGGGCGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATCCTCTACAAGTTCAAAAGGCAAG chr4 + 94230402 83487295 83487294 83487413 83487295 83487294 83487413 119 TTTTATTTCAGACTCTCAAAGAATTGGAGGAGGCAGTGGCTACTGGGCTATTGTGGTTCTCTTTGTTATCTGTCTAGTCGCAGTTGGAGCTTTCATCCTCTACAAGTTCAAAAGGCAAG ...xx..x...::x..x.:x::x.x..x..x..::.:...........x:.x.....x..x.....:...x.x..xx......:x.....:............................ 119M 88/119 73.9% 119/94230402 0.0% 0/119 0.0% -75753034 -18477368 +10396 chr4 + 190214555 7737067 7737066 7737220 154 AGGAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCTGTGAGTCACAGTGAGGACGTCCAGGGCGCTGTCCAGGGTGAGGAGTTTATAGATGATGATCTCGACTCGCAGACTCTAGGTAACG chr4 + 94230402 83495566 83495565 83495719 83495566 83495565 83495719 154 AGGAAACTACCAGGCAGGAATGTCTATGCCCAGATGCACAATGAAAAAGAGCAAGAGATGACAAGCCCTGTTAATCATAGTGAGGACACCCAGAACATCATCCAGGGTGAGGAGTTTATTGATGATGATCTGGACTCTCAAACGCTAGGTAACG .......x:..........x:..x..:.....:........:..:..:.....:........x........x.:...:.........::....::.::::...................x...........x.....x..:..x.......... 154M 126/154 81.8% 154/94230402 0.0% 0/154 0.0% -75758499 -18471903 +5979 chr4 + 190214555 7740184 7740183 7740265 82 CTCTTCTGTTTCC-TAGGCAACCACTCAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCACAGCTACCTGGTGAGCTGAT chr4 + 94230402 83498317 83498316 83498399 83498317 83498316 83498399 83 CCCCTCTATTTTCATAGGCAATCACTCAGGCGTGGTTTTGAGCATCAACTCCAGAGAGATGCACAGTTACCTGGTTAGCTGAT .:.:...:...:.-.......:..............::..............x.............:........x....... 13M1I69M 72/82 87.8% 83/94230402 0.0% 1/82 1.2% -75758133 -18472269 +13449 chr4 + 190214555 7758756 7758755 7759260 505 GGCGCCAGTCTAGGGTTACACCACGTGAAACAGTA-GAAAATTCAACCAGGAAAGCAGGAAATTCAGTGAAGCTACTA-----CAAAGTGG--GGCGAGTGGACTGAAAACTAGGATTTTCCTTGCAAGTTTCTTTTCATAAAATTTTTACTTTATGA----ATTAAATACATTGAGAAA--CAGTGAAAA---TATATTTACAGTCATTTGAAGTGGGCACTACTAACATATTTAATT------------TAAAAAAATCTTTGCTGTTTCTTTGCCTGTTTCTTTCAAAGAGAATTTTAAATATGACTTTAGCTTTTAAAAAATACAATAAGGAAATAATTACATTCTTAATATGAAAACATT---TTACAACGTATCACCATGGTCAATTAATTCTGAATATCACTTAAAAGTTGATGTTAAAATG-----TAAAGTGAATATTTCCTTTCTTGTTAGAAAATCAAA-----AAGATTATCTCATT--AAAAACACCTTTGGT--CCTAAGACTTATGATCTGAAGATGTCCTTTTGAAAGTATCTTC chr4 + 94230402 83514799 83514798 83515320 83514799 83514798 83515320 522 GGTGCCTGTCTTTTTTCACACTCTGCAAGACTTCCTGAAGAATAAACTAGAAAGGCATAAAGTTAGTTGAAGCTACTAAGACACACATTTGTAGGTGGGTCTGTT-----TTGGACTTTTTTACAGAAGTTTCTAT-----GAATGTGTGCCAAAAGACAAAATTAAATACATTGAGAAATACAGTAGAAAGACTATATTTACAGTCAATTATAATGGGCACTGCCAACATATCCAATAACAAAAATAAAACAAAAACTTTTTTCATGTTTCTTT-CATGCTTTTTTCACAGAGATTTTTAAATATGATTTT-GTTTTTAAAAAATACAATAAGGAAATAATTACATTCTTAATATGAGAACATTATCTTACAACACACAGCCTGGGCCAATTAGTT-TGAAAGTATCTTAAA---TGAAAAAAAAAAAGATACTAAATTAAGTACTCTCCATC----TGAAAAGTCAAATTGCCACAATCATCTCATTAAAAAAACACATTTGATCCCCCAAGATT---------ATGATGTTTTCTTTAAAAAATCATC ..:...x....xxxx.:....:x:.::.:..xx:x-...:.x.x...:..:..:...x:..:..x:x...........-----..x.x.x.--..:.:..xx::.-----:.:.:x....::x::x........x.-----:...x.x.:.:xx.x..----..................--....::...---..............x..:x.:........:.:.......::...x------------:.....xx.:...xx.........-.x..:..:.....x.....x............:...-.:...........................................:......---.......::.:x:..xx..:......:..-....x:.xx......---...x:xx....x:-----....x.:.:..:.::.:x..----.::...:.....-----.x:..:........--........x....:.--..:....:.---------.x.....::.:..x...:x...x.. 35M1I42M5I8M2I12M5D26M5D17M4I18M2I9M3I45M12I24M1D36M1D52M3I29M1D15M3D13M5I20M4D12M5I14M2I15M2I9M9D25M 349/476 73.3% 522/94230402 0.0% 75/476 15.8% -75756043 -18474359 +3818 chr4 + 190214555 7767936 7767935 7768018 83 CATAATGGTGTACACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACCTGAGCCCAGGAGATCAAGGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:.....--...x..:...:...........::........x:xx.x.:.x...:...:.....:..x.:x:......:. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -68265261 -25965141 +8837 chr4 + 190214555 7768839 7768838 7769031 193 CTTACCTTGGCCTTCCGCAGCACATGCCCTCGGCAGGGGGAGCTGCCCG----GGGCAGCCTGGCTCTTCTTCAAGACGGCCGCGCTGTTCACCGGCACGGGGCCCTCGGTGTCACTGGTGTCACAGCTGGAGATGGGCGAGTTTTCCAGGGTCCGGTGCCGGAACACTGGAGACTTAACGGAGAGAGAGAACCCCA chr4 + 94230402 83523132 83523131 83523320 83523132 83523131 83523320 189 CTCACCTTTGCTTTTCGAAGTACATGCCCCCGACATGGAGAATTATTTGATGAGGGAGGTCG-------CTTCAGAGCTGCTGCACTGTTCACAGGTATTGAGCACTCAGTGTCACTGGTATCACAACTGGAGATTGGAGAGTTTTCCAAAGTTCGGTGCTTGAAAATTGGAGAC-TAATAGAGAGTGAAAACCCTA ..:.....x..:..:..x..:........:..:..x..:..::.::::.----...x:.:.x-------.....:::.x..:..:........x..:.:x.:..x...:...........:.....:........x..x..........::..:......:x...x.:.......-...::.....x..:.....:. 49M4I9M7D106M1D21M 136/185 73.5% 189/94230402 0.0% 12/185 6.5% -75754293 -18476109 +13106 chr4 + 190214555 7772815 7772814 7773048 234 CACACCTGTGGACTCGATGTCCCTGACTTGGGCTCGATGGCCAGCCCCAGGGTGACTCCGCCCGCCAGCGCTTTCTTCAGGCTCTCCTTGACCTCCGTCAGCTCCAGCTCCAGGCTGACACGCTCCGCCTCCTTCTGCCGGCACTCCTCCTCCAGCTGCTTCAGCTTCTCCTCCAGGATCGCCTGCGGCTTCCTGCCTGGAATTCCCAGAAACGCCGTTACTCCCGCGGCAGGC chr4 + 94230402 83523967 83523966 83524200 83523967 83523966 83524200 234 CGTACCTGTGGGCTTGATGTTCCTGACTTGGGCTCAATAGCCAAGCCCAGTGTGATGCCACCAGCGAGGGCTTTCTTAAGGCTCTCCTTCACCTCAGTCAGTTCTAGCTCCAGGTTTACACGCTCAGCCTCCTTCGTCTTACATTCCTCTTCCAGCTTCTTTAACTTGTCTTCAAGAATCACTTGGGTCTTCCTGCCTGTCATCCACAGCAATGTTGTTATTTCAACAGGAAGC .::........:..:.....:..............:..:....:x.....x....:x..:..x..x..x........x...........x.....x.....:..:.........:.x........x.........xx.:x:..:.....:.......x...:.:...x..:..x..:...:.:..x.x...........xx..:.x...x..:.::....:.:.x:.:.x.:.. 234M 177/234 75.6% 234/94230402 0.0% 0/234 0.0% -75751152 -18479250 +11399 chr4 + 190214555 7774726 7774725 7774905 180 ACACCCTTCATACCGGCGTTCACTTCAATAGCCGCTCGAAGGTCTTTTCTTTCCTTGCGGAGCTGGGCCAGCCTATTCCGCAGGGCCTCTTTCCTCTTCAGCAGCTCCTCCTCTTTGGTCTGTAGCCGCTTGGCATCTGCTTCTACCCGGTTCTTGCCATACTTGTACTGGGCAGCATCT chr4 + 94230402 83524686 83524685 83524865 83524686 83524685 83524865 180 ATGCACCTCATACCAGCATTGACTTCAATGGCAGCACGTAGATCTTTCCTTTCTTTTCGGAGCTGGGCAAGCCTATTCCGCAGTGCTTCTTTCCTCTTTAGCAGTTCCTCTTCCTTGCTCTGTAACCTCTTTGCATCAGCCTCCACACGATTCTTGCCATATTTGTACTGTTCTGCATCT .::.x.:.......:..:..x........:..x..x..x..:.....:.....:..x...........x..............x..:...........:.....:.....:..:...x......:..x...x.....x..:..:..x..:...........:........xx.x...... 180M 145/180 80.6% 180/94230402 0.0% 0/180 0.0% -75749960 -18480442 +5795 chr4 + 190214555 7778751 7778750 7778896 146 GGTATACTTACTCGAACCCGTCCTTTTCACAACAGCCGCGGGATCCGCTTTCTTTGGCTGACTGCTCAGAGTCTTCCCTTTTCCTGTGACCCCATTAGACGCCACGGGGGGCTTTTTACCCTTGAGCTGTT--GAAATAAACATATAA chr4 + 94230402 83526648 83526647 83526795 83526648 83526647 83526795 148 GATATACTTACTGGATGCTGTGCGCTTCACACATGACACTGATTCAGGTTTTTTTGGTTGGCTATTTAATGTTCTCACTTTTCCAGTGATCCCATTAGCAGTTGCAGGAGGTTTCTTGCCTTTGAACTGTTTAAAAACAAAAGTATAA .:..........x..xx.:..x.x:......xxx.x.:.x.:x..x.x...:.....:..:..::.:.:x..::..x.......x....:........xx.:::.:..:..:..:..:..:....:.....--:...:...x:..... 131M2I15M 99/146 67.8% 148/94230402 0.0% 2/146 1.4% -75747897 -18482505 +17707 chr4 + 190214555 7781368 7781367 7781657 290 TGCCGTACCTGCGAGTTGAGCCCGAGAGACGCCCTCCCCACAGAAGAGGTATTAGTGACAGACTGAGCGGAGG---------------CAGGGTATTTGTAATGGTTAGAGGACAGCTTGTCAGCAGACAGCCTAGAGGCCTTTCTGTCAGCAGGAGAGTAGCGGGCAAAGATGTGCGGAGGCGGCAAGTTATCGTACAGGCCTGCGTTATCATAAAGCACCTCTTCTCCCAAGCCTCTGCTGCAGGAAGCAGGAAAGCCGTCTTCCGGTTCCCACTGCAACACACATAGCTTTGTGGTTAGTGA chr4 + 94230402 83528047 83528046 83528342 83528047 83528046 83528342 296 TACAGTACCTGTGAG---------ACAGATCCCCTCCCCACAGCAGAGGTATTAGTGACAGACTGAGCAGAAGACAGATTGGATGAGACAGGGTGTTTGTAATGGTTAGAGGAGAGTTTGTCAGTAGATAACCTATTGGTTTTCCTGTCAGCTGGCGGATAGCGCGCAAAGATTTTTGGAGACGGCAAGTTATCGTACAGGCCTGCGTTATCATAAAGCATTTCTTCTCCCATGTTCCTGCTACGAGAAGAAGGAAAGCCATCTTCTGGTTCCCACTGCAATACACACACTTTGGCAGTTAGTAA .:.x.......:...---------.x...:x............x........................:..:.---------------......:..................x..:.......:...:.:....xx..::..:........x..x.::.....x........x.x:....:......................................::..........x.:::.....:.::....x.........:.....:..............:.....:.x:..x.::......:. 15M9D49M15I217M 232/281 82.6% 296/94230402 0.0% 24/281 8.5% -75746679 -18483723 +8561 chr4 + 190214555 7785959 7785958 7786327 369 TGACATTAAATGACAAACTGTCTACTAGCCTCAAACTATCCACTTGTTCAAATGCAGATTCAGATAAACAGCATGTCAGAAACCAGGAGAAC---AGAGATGAGATGGAGTCTCCTTGCCTCAGAGCATTAAAAAGCTGACCTTATTCAGAC-CTGAAACCAGGGGAACT----GAAGCACAGAATTTTCACA-GCCTCGGCCTCTAACAAA-ACCAACCATTACTCCAAAAAAAGGGCA---CTCACCGAGCCGTTGATGCACGGGACATCGTCATAATGAAGTGCCGTCCCGCTGGGGTGGGCATAGCCGTTGGAGGTGCCCCCTAGATATGGGTTAGCAGATATAACACGCCTGTTCATGAAACTGAAAGAAAGGAAAT chr4 + 94230402 83529532 83529531 83529910 83529532 83529531 83529910 379 TGGCAACAAATTGTCAACAGGCAACTGCTTTCTTAATGCATCTTGGCTCATGTGCAGGTTAATGTAAGCAATATGTCCCACACCCCTAATACCCTATAGGTGTGAGGGAAGTTTGCAGTCCCC-AGTCTGAAAAATAGGACTTCATTTGGAAACTGC--CCAGTGGGCCTTTTTAGATAATATAATTTTCAGATGTCCATGCATTCAACACATGCAAACCATTTGTTCTGTGTAAATTCAATTCTTACCGATCCATTTATGCAGGGAACATCATCGTAATGAAGTGCCATTCCACTCGGACATGCATAGCCATTGGCAGTGCTTCCCCGGTATGGATTTGTGGATATAACTCGCCTGTTCATAAAACTGaataaaacaaaat ..:..x:....x::x...x.x.x...:x::..xx.x.::x:x:.x.:...x:.....:..x.x:...:..::.....xx.x...xxx.:x..---.x..:..x..x...:x:.:x:x.:.:.x-..:x.x.....xxx...:.:...::..x-...x--....x..:x..----::.xx.:.x........x.-.:.:xx..x.::....x.-:.x.......xx.:.x:x:x..:xx..---..:.....x..:..x.....x..:.....:..:............:.:..:..x..:::x........:....x:....::..:x.:.....:..x.::........x...........:........x:...x:.... 92M3I28M1D28M1I4M2D11M4I19M1I18M1I27M3I139M 233/366 63.7% 379/94230402 0.0% 16/366 4.4% -75743573 -18486829 +3132 chr4 + 190214555 7791837 7791836 7791884 48 TTAATCAAAAAAAAACAAAAACAAAAAACAACAACAACAAAACCCTAA chr4 + 94230402 18476688 18476687 18476735 18476688 18476687 18476735 48 TTAATCAGGAAAAAAAAAAAAAAAAAACCAACAACAACCAGACCCTGA .......::......x.....x.....x..........x.:.....:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -10684851 -83545551 +11198 chr4 + 190214555 7793669 7793668 7793830 162 AGTGGGTCTTACCAGAAGGTCTGTTTGGCTGTCTGAATGACACTTGCAGACATCTCCACATCAATGTAGTCATAGTGCAGAGCCTCCGGGTCTGTGGACGATCCCGTCTCTGCGAGTAAAATCCCAATCCACCTGCCCATGTCTTCAGAAGAAGATGCCTGT chr4 + 94230402 83533384 83533383 83533545 83533384 83533383 83533545 162 AATGCCTCTCACCAGAAGGTCTGTTTTGCAGCCTGGATGACGCTTGCTGTCATTTCCACATCGATATAGTCATAGTGCAGAGCTCCGGGGTCTGTCGAAGATCCCGTTTCTGCAAGTAACATCCCTATCCATCTGCCCATGTCTTCAGAGGAGGATGCCTGT .:..xx...:................x..x.:...:.....:.....x.x...:........:..:.................::.x........x..x........:.....:.....x.....x.....:.................:..:......... 162M 136/162 84.0% 162/94230402 0.0% 0/162 0.0% -75739715 -18490687 +14811 chr4 + 190214555 7800408 7800407 7800667 260 CTCTGTGGAGTACAGCCCCTGGGAAATATCCTACCTCCAATACTGCAACCTCCTGGCCGTTGCGCAGCAGCCGGAACGTCAGAGGATGTTTAGAATCCAAACCCGGGATCACCTCGCAGCCACGGAGCGGAATAGACACAATATGGGTCTTCAGGTCGGTCCTGTCCTTGTGGAAAATGAGCTTGTTATCTTTCACTCGGCACCAGCGCTCTCGCCAGCGGCTGTTGGAGAGCACGTTCAGATAGCCTGCGGAGACACAA chr4 + 94230402 83535109 83535108 83535367 83535109 83535108 83535367 259 CTCTGTAAGTCAGAGCCTTTAG-AGCCACAGCACCTCAAGCACAGCAACCTCCTGCCCATTTCGAAGCAGCCGGAAGGTCAGAGGATGCTTTGAATCCAGTCCTGGGATGACTTCACATCCACGGAGAGGGATAGAAACAATGTGCGTCTTCAGATCTGTCCTGTCCTTGTGGAAAATGAGTTTATTGTCTTTCACTCGGCACCAGCGCTCACGCCAACGGTTATTTGAGAGCACATTGAGATATCCTGCAATGAAATGA ......:::x:.x....::.:.-.:x:.:xx:.....x.::..x...........x..:..x..x...........x...........:..x.......:x..:.....x..:..:..x........x..:.....x.....:..x........:..x.......................:..:..:.......................x.....:...:.:..x........:..x.....x.....::x..x.::. 22M1D237M 201/259 77.6% 259/94230402 0.0% 1/259 0.4% -75734701 -18495701 +11861 chr4 + 190214555 7809610 7809609 7809838 229 TTACCGCAGGTGGGAACATCTTCCTCAGCTGAGGAGGTCTGCTCGTCTGTGGACGGCTTTTTCTTTCCCAGACTGATGATCTTGGTGATTTTTTTCCCAGTGACTTTCGACACAGTGCCCTTGGCCTCTGATTTGGAACTTTTCTTCCTCTTCACTGTCAAGAGTAACAACAGCAAAAA----------AGCATGTTTTAATTGTAGATATTAATTGAAAAAAAAAACATACATCAAAA chr4 + 94230402 83538792 83538791 83539018 83538792 83538791 83539018 227 TTACCACATGTTGGAACATCTTCTTCAGCTGACGAGGTCTGTTCATCTGTTGATGGCTTTTTCTTTCCTAAACCAATGATCTTCGTTATTTTTTTCCCTGTTACTTTAGTCACAGTGCCCTTGGCTTCTGTTTTTGAACTTTTTTTCCTCTTCACTATTAAGAA-------AGCAAAAGTTTGCATTTTAGTGTGTTTAAATTATG-----TAGTCAACAGAGAAAACCTGAATAAAAA .....:..x..x...........:........x........:..:.....x..:..............:.:..::........x..x...........x..x.....x.x...............:....x...x........:............:.:....:-------.......:----------..::.....x....:.:-----..:.::.x.:.:.....x.:x..x.... 164M7D8M10I17M5D28M 175/217 80.6% 227/94230402 0.0% 22/217 10.1% -75729182 -18501220 +7004 chr4 + 190214555 7815961 7815960 7816181 221 TTTTGTTTTTGTTTTTTTTTTTAGTGTATATATGTTTTTGGCACAAGCA------------GAACTCACCTTGCTCCTTTCCATTACA---TGTGGTAATTCCATTTTCCACAACACCCTCCCCATCTGAGCTGGGTCTCTCTGAAGACAGTTTCTGTAAGGAGAAAAAGATTAAGTTATTCTTACA------GTGGTCACTTGGACCCAGTGATGTGTGATGGATCAACCAAAAGTTATCT chr4 + 94230402 83541352 83541351 83541591 83541352 83541351 83541591 240 TTTTACTCCCTCTCTCTTCATATTTGCACATAT-TCTTTGCAGCAAGCATCTCTGTATTTGAGACATACCTTGTTCTTTTCCGTTGCACACTGTGGTGATGCCATTTTCCACAGCACCCTCCCCATCTGAGCTCGGTCTCTCAGATGACAACTTCTGCAGGAACAAAGAGATC-AGTTGCCCTGCCATATCATGTTGTCACCTTTACCGTATTAAGTCTCATCAGTCAATTTAAATTAAGCT ....::.:::x:.:.:..:x.xxx..:.:....-.:....xx:......------------::..x:......:..:.....:..:..---......:..x............:...................x........x..x....::.....:.:.:.x...:....:-....:::..xx..------..x.....:.xx...xx:.x.x..x.x..x::....::x...x.x.x.. 33M1D15M12I27M3I82M1D13M6I49M 152/219 69.4% 240/94230402 0.0% 23/219 10.5% -75725391 -18505011 +3151 chr4 + 190214555 7822536 7822535 7822619 84 CAAATGTTTTTATTCAAAAAAAACGGTTGTCTTCTTTCTTTTTCTTTTTTC------TTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTC chr4 + 94230402 77863771 77863770 77863860 77863771 77863770 77863860 90 CAAATATTTAAATTCAAAAAAATTTGTTGTTTTTTTTTCCTCCATTTTCCCGTGATTTTTTTTTTTTTTCCATAGGATAGTTTCCTGTTC .....:...xx...........x:x.....:..:...:::.::x....::.------............::x.::..:..xx..::.:.. 51M6I33M 57/84 67.9% 90/94230402 0.0% 6/84 7.1% -70041235 -24189167 +8923 chr4 + 190214555 7824316 7824315 7824572 257 CAATCTCTGCACATTTTTTAAGGAAATCTGACCACTCCGTTTCTGGGAATATTGGCTCTTGTCTTCTGTTTGACCCCTACACAAAGGCTCATGTTTTCAGCATTTGTGTACACACACACACACACACAGAGACAGTCAGTTAATTCTGTCAAGAACCACTAGTAATGGAAATTGGAGACAGAG-AGCAGAAACAAATTTGGCAGTAATTCTTGCACGAGTATGTGCAAAGTCAAGCACT-GGTTAAACACAGTTCTCAT chr4 + 94230402 83545893 83545892 83546128 83545893 83545892 83546128 236 CAATTACTGGTCTTCAGTTAGAGAAA-------ACACAGTTTCTGGGAACATTCATTTCTGTCTTCTGCATGACCCTGATTCAATGGCTCATGTTTTCAGCATCTGCTCACAC-CAC--------------ACAGTTAGTTAATTCTGGCAAAAGCAGATAGTAATGGGAGTTACAGACAGAACAGAGGGAAATGATTTGGCAGTGCTAACTGAAT-AGTATGTGCAAAGTCATGCACTCAAGTAAATACGGTTCTTAT ....:x...xx.x.:xx...::....-------..x.x...........:...x::.::.........:x......:x.:x...x..................:..:x:....-...--------------.....:...........x...:.:.x:x.........:.:..:x.......:-..x:.:..xx:..........:x.xx:..x.:-................x.....-::x....:..:.....:.. 26M7D80M1D3M14D52M1I32M1D22M1I19M 173/234 73.9% 236/94230402 0.0% 25/234 10.7% -75721577 -18508825 +3587 chr4 + 190214555 7827435 7827434 7827513 79 GTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..::. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -68205766 -26024636 +12198 chr4 + 190214555 7838470 7838469 7838708 239 TCTCAGAAAGGCATGTGGAACTGAAATGGCTGTGAAACACAGCAGACAACCTACCTTCAGCCACTGCTCGGCCTGTTCCTTGCTCTGGACGGCGAGAACAAGCGGGTCCGTGCCCTGCTGAGTAATCTTCAGCTCGTGCTTCTTCTTTTTGCTGTCTTTCGGGATGTACGTAATGTTACAGCCTTGGAGTGGCAGTTCCATCTGAGGCTGCTGGTCCTTGGAACTTTTATAGCACTGCA chr4 + 94230402 83553159 83553158 83553380 83553159 83553158 83553380 222 TCTCAGACTGGT---TGGGATTTAAGTGGTT--------------ACCCCATACCTTTAGCCACTGCTCCGCCTGCTCTTTGCTCTGAACTGCCAGAACTAGTGCATCCGCTCCTTGGTGAGAGATTTTCAGCTCATGTTTCTTCTTTTTGCTGTCTTTGGGGATGTAGGTGATGCTACAGTCATTCAGGAGCAGCTCCATCTGTGGCTGCTGGTCCTTGGAACTTTTGTAACACTGTA .......xx..:---...:.:.x..:...:.--------------..xx.x......:...........x.....:..:........:..x..x.....x..:.x:....:x..:..x....x:..:........:..:....................x........x..:...:.....:.x.xx..x:....:........x.......................:..:.....:. 12M3D16M14D194M 176/222 79.3% 222/94230402 0.0% 17/222 7.7% -75714689 -18515713 +3346 chr4 + 190214555 7839272 7839271 7839384 113 GCTGCAGTGAGCCATAATACCACCACTGCACACCATCCTGGGTGACAGAGACTCTGTCTCCAACTAACAAAGAAAAACAAAACAAAACAAAAAAACCCAACACACACAAATAT chr4 + 94230402 88654938 88654937 88655033 88654938 88654937 88655033 96 GCTGCAGTGAGAAA----------ACAGCATTTCATTTGTAGTGACATTG-------CAGCAACTGAGCAAAAAAAACCAAAAAAAACAAAAAAACCCCAAACACACAAATGT ...........xx.----------..x...:x:...::xx:......xx.-------.xx.....:.xx..:......x...x...............x.x..........:. 14M10D26M7D56M 72/96 75.0% 96/94230402 0.0% 17/96 17.7% -80815666 -13414736 +15117 chr4 + 190214555 7843109 7843108 7843360 252 AAAAAATGCAAGCGATTCCAAAT--GTCTTACCAGCAGTTTGGTGTCTTTGATGACGCAGAGCAACTTGGTCCACTGGCCGAACCGCTTCTTCCGCAGCAGGAAGGCGCAGATTTTGGCGTCCTTGACCAGGTCCATGGAGGCCTCCTCGGAGGGCCACTGGTGCCGGGTTTTCTTCCCCTTCCCATCCTCCTCCTCTTCATCATACGACTCATAAGAGCTGCTCATCGCATCGGAATCATAATCTGTAAAAAA chr4 + 94230402 83556275 83556274 83556528 83556275 83556274 83556528 254 AGAAAATACAGCCAGATAGAAATAGGAATTACCAGTAGTTTGTTTTCTTTGATAACACACAGTAGTTTGGTCCATTGCCCAAATCGTTTCTTTCTAAGTAGGAAGGCACAAATTTTGGCATCCTTCACCAGATCCATAGAGGCCTCCTCAGAAGGCCACTGATGTCTCATTTTCTTCCCCTTTCCATCCTCTTCCTCTTCATCATAGGATTCGTAAGAGCTGCTCATAGCATCTGAGTCATAATCTTCAAGAAA .:.....:..:x.::x.xx....--.xx.......:......x.x........:..:..x..:.::........:..x..:..:..:.....:.xx..:........:..:........:.....x.....:.....:...........:..:........:..:.xx:.............:........:..............x..:..:..............x.....x..:.........x:..:... 23M2I229M 199/252 79.0% 254/94230402 0.0% 2/252 0.8% -75713166 -18517236 +3688 chr4 + 190214555 7845282 7845281 7845364 83 CATGGTAGGGCACGCCTGTGGTCCCAACTACTCAAGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTCCGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:.x.....--...:..:...:.....::.:........x.xx.x.:.x.......:.....:..:::x:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -68187915 -26042487 +6820 chr4 + 190214555 7868616 7868615 7868761 146 ACTCACCAGCCAGGGCTGAGGGATCTCCGGCAGGGGCATCTGAGGAGGGGCTGGCAGGCTGTTAGCGGTCTCCTGCTTCTGAGCATGGTCCTTCACATCAAAACCTGTAAGAATTAACCAGA-ACCACAGAAC-------TGGATGAGGATGGG chr4 + 94230402 83571888 83571887 83572041 83571888 83571887 83572041 154 ACTCACCAGCCACTGCTGAGGTATTTCTGGCAGAGGCATTTGAGGAGGTGCTGGCAGGCTGTTGGCAACTTCTGGTTTCTGCACATGTTCTTTTATTTCAAAACCTGCAGAAGAGAAACACATATCGCTTAACACTTTGGTGGATGTAAATGGG ............xx.......x..:..:.....:.....:........x..............:..::::..:x.:.....x:....x..:..:.:x..........:.::.:xx..x..x.-.:.:.xx...-------......x::..... 122M1I10M7I14M 108/146 74.0% 154/94230402 0.0% 8/146 5.5% -75703272 -18527130 +3908 chr4 + 190214555 7868887 7868886 7869041 155 CAGGTGAAGAACCGACAGCTTAAATAAAGTGA-AAGAAAAGAAAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAG--AAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAA chr4 + 94230402 8397431 8397430 8397586 8397431 8397430 8397586 156 CAGGAGAAGCAC--ATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGA ....x....x..--.:xx:...:...:..:x.-...:..:x:.:......:..x....x.:.:::.:.x.::x:...x.....--.:.:.......x...:x.x......x:x.:.:x...:.:.:.xx.:.::......:.:x.:..::.x..:.:. 12M2D18M1I50M2I73M 95/153 62.1% 156/94230402 0.0% 5/153 3.3% -528544 -93701858 +4263 chr4 + 190214555 7868911 7868910 7869129 219 TAAAGTGAAAGAAAAGAAAAGAGAA--AGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAA---------AGAAA------------AGAGAA-----------AGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGA---------AAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGA chr4 + 94230402 8397325 8397324 8397586 8397325 8397324 8397586 262 TAATGGCAACGAGAATAAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGA ...x.xx..x..:..x..:...:..--..x:.x.x..x...x.x...........:.x.:..:.:...x:.:x.:x.:....---------.....------------:.....-----------...x.:..xx.:.:....:x.::.:::..::.x....x::....:::x...x....---------:...:...:.x...:x.x......x:x.:.:x.....:.::xx.:.::......:.:::...:.:x..:... 25M2I55M9I5M12I6M11I56M9I72M 138/219 63.0% 262/94230402 0.0% 43/219 19.6% -528414 -93701988 +10566 chr4 + 190214555 7868919 7868918 7869130 212 AAGAAAAGAAAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAA chr4 + 94230402 73474949 73474948 73475151 73474949 73474948 73475151 203 AAGAAAGGGAAAAGGAAAGAGAAAGGGATCTGGAAAAGGGAAGAGAAAGGAATCaggaaaagaaaagagaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaa---------aaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaataagaggaaatgaaagagtaaaaggagaaggaaaaaaagggggaaggagaa ......:.:...::...........:..xxx.....:..:....:..::...xx:::.........:.......:...::....::....:.....:.....:....---------..:......:...::....::....:.....::......:.....x..:..::..x....:..x:.....::....:...x:::::.:..:..... 107M9D96M 147/203 72.4% 203/94230402 0.0% 9/203 4.4% -65606030 -28624372 +3330 chr4 + 190214555 7868923 7868922 7869056 134 AAAGAAAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGA-AAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAG chr4 + 94230402 8397454 8397453 8397587 8397454 8397453 8397587 134 AGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAG-GGGAGTAGAAGGGTAAAAGAG .:..xx.::..:...x..:......:.:x....x.:.::.::.x::.x:...x..:..x..:.:.....:.-....x:x..:...x:x..::x:.:..:::.xx..:......-::..:x....::.x:...... 71M1I41M1D21M 79/133 59.4% 134/94230402 0.0% 2/133 1.5% -528531 -93701871 +3577 chr4 + 190214555 7868924 7868923 7869053 130 AAGAAAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAA----AGAAAAAAGAAA----AGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAA chr4 + 94230402 65771204 65771203 65771337 65771204 65771203 65771337 134 AAAAAAAGAGAATAAAAGAGAGAAAAGCAC----AAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA ..:.........x:.:.:.......:.x.x----...:.xx....:......:..----..x:....x.:.----..:.:::..::......x::.x....::x.x:.....x..x..x....xx.:x....:.:... 30M4D21M4I12M4I63M 85/126 67.5% 134/94230402 0.0% 12/126 9.5% -57902280 -36328122 +3046 chr4 + 190214555 7868928 7868927 7868992 65 AAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAG chr4 + 94230402 10788496 10788495 10788560 10788496 10788495 10788560 65 AAAGAGCAGAAGAAATAGAAAGGAACAGAAAAGGGAGGGAGGGAAGATCAGAGAAGAAAAAGAGG ......x.::.....x.......:.x..::..:.:.::...::....xx.:....:...:.:.:. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -2919568 -91310834 +3864 chr4 + 190214555 7868935 7868934 7869086 152 AAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGA chr4 + 94230402 65771192 65771191 65771340 65771192 65771191 65771340 149 AGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATA---ATAAAGTCAGTAAAAAAAAAATGA .::...xx...:..:::..::.:.x.:..:.........x.x...:.xx.:..:......:.:xx.:..x....:x::.x.xx.:::....:.:.:.:.:x...x..:..:x.x......x:.x.---.x.:..xx.:x......:...x.. 125M3D24M 90/149 60.4% 149/94230402 0.0% 3/149 2.0% -57902257 -36328145 +4330 chr4 + 190214555 7868936 7868935 7869145 210 AGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGA-------------------------AAGGGAA-----------AGGGAAAG--GGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGA---AAGGGAAAGGGAAACGGAAAGAAAAGAGAA-AAAAGAATAAAAGAG chr4 + 94230402 8397336 8397335 8397587 8397336 8397335 8397587 252 AGAATAAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAG ...:x........:.x.:x::x.x..x..:x:x..::....:....x.........:x:..x..x.:..:.-------------------------.:.:...-----------..:x.:..--:...:...:x:...:....:::x....x.:.::..:.x.::x:...x..:..x..:.:.....:.x....x.x..:...---::..x.:.::...:.x:::.:...:.:..:-.:...::........ 71M25I7M11I8M2I79M3I30M1I15M 131/210 62.4% 252/94230402 0.0% 42/210 20.0% -528400 -93702002 +3163 chr4 + 190214555 7868944 7868943 7869030 87 AGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...x...:..x:....xx.x.::x::.........:...:........:..x..::xx........x:...x:x..:..:x..x:.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% -67372563 -26857839 +4136 chr4 + 190214555 7868947 7868946 7869114 168 AAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGG--AAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAA chr4 + 94230402 84536568 84536567 84536718 84536568 84536567 84536718 151 AAGGGAAAGGGAAAGA-------------------AAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAA ................-------------------.....:x..x:....x..:...x...::::.............:..:..:...xx.x:x.:x....xx::x..xx:...x:--x........::x...x....::..xx::..::......xx::...:.x:... 16M19D81M2I52M 98/149 65.8% 151/94230402 0.0% 21/149 14.1% -76667621 -17562781 +3704 chr4 + 190214555 7868962 7868961 7869141 180 AAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAG----AGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAA----GAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAATAAA chr4 + 94230402 49044652 49044651 49044827 49044652 49044651 49044827 176 AAAAGATTAAAGAGAAAAGAA----TAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGA--------AAATGAGCAATAAGCATAAA ......xx.....:.......----x..:...xx..:.:x:.xx.:.::..x.:.x.:x.:...:x.xx..:x:.::..::...:..----.......::..:..x:.:.:.x:.:.:........::.x:...x.:..----....xx:....::..:.--------...x...x..x...x..... 21M4D62M4I48M4I17M8D20M 107/168 63.7% 176/94230402 0.0% 20/168 11.9% -41175690 -53054712 +3333 chr4 + 190214555 7868971 7868970 7869094 124 AAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAA chr4 + 94230402 65363837 65363836 65363958 65363837 65363836 65363958 122 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGAC--GAAAAAATGATAGGAAGCAGCCAACAGAACAGAA ......x:.:...x.xx..::x:........:..x.xx::::..:::x....:.....::...x.x.....:...xx...:......x--.:...:.x:.x..:..:x..xx..x....x::.. 88M2D34M 76/122 62.3% 122/94230402 0.0% 2/122 1.6% -57494866 -36735536 +3290 chr4 + 190214555 7868972 7868971 7869041 70 AGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAA chr4 + 94230402 54037031 54037030 54037100 54037031 54037030 54037100 70 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAA ..:............:....:.....x...:.xx:.:.:.x..::..x..:..:......:.x:..:x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -46168059 -48062343 +4025 chr4 + 190214555 7868974 7868973 7869132 159 AAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAACGGA----AAGAAAAGAGAAAA chr4 + 94230402 49044652 49044651 49044810 49044652 49044651 49044810 159 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAG----AAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA ....:.xx...:.........x.::::.xx..:::x..xx..::.:.x:::x..x:.:...x.xx..:x..:..::.:.....xx.::.....----......::x.....:x.........::.::..x.:.:x:.:....x..----.:...:..:..... 93M4D48M4I14M 95/155 61.3% 159/94230402 0.0% 8/155 5.2% -41175678 -53054724 +4149 chr4 + 190214555 7868976 7868975 7869146 171 AAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAA--------GAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAATAAAAGAGA chr4 + 94230402 49044652 49044651 49044813 49044652 49044651 49044813 162 AAAAGATTAAAGA---GAAAAGAATAAGAGATTAGGGGTGGTTA--------------GAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ......xx.....---.......:x......xx:..::x..xx.--------------......x...x.:x.....:--------...........:::xx.......:......:.x....:.x:..:::....::.:.:x...:.:....:xx:...xx.::....:x:...:x.. 13M3D28M14D20M8I93M 103/154 66.9% 162/94230402 0.0% 25/154 16.2% -41175676 -53054726 +11126 chr4 + 190214555 7868985 7868984 7869190 206 AAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGA---AAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAATAAAAGAGAAAGGGAAAGGGAAAGGGAAAAGAAAAGAAAAGAGAAAAGAAAAG chr4 + 94230402 73474949 73474948 73475152 73474949 73474948 73475152 204 AAGAAAGGGAAAAGGAAAGAGAAAGGGATCTGGAAAAGGGAAGAGAAAGGAATCaggaaaagaaaagagaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaa----aataagag-gaaatgaaagagtaaaaggagaaggaaaaaaagggggaaggagaag ......:.:...::..............xxx.....:..:....:...:..---.:................::....:.....::......:....:......::....:.....::.....:.....:...x.:....:...::....----.....:..-....x.:..::.x...:...:...:...:...:.:.:..:..:... 51M3I96M4D8M1D46M 155/201 77.1% 204/94230402 0.0% 8/201 4.0% -65605964 -28624438 +3942 chr4 + 190214555 7869001 7869000 7869115 115 AAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAA--GAGAAAGGGAAAGGGAAAC chr4 + 94230402 15855375 15855374 15855490 15855375 15855374 15855490 116 AAGAGTAAAG-AGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGGTTGGTGAAAC .....x..:.-.:..:...:x...x.::...:.xxx:..x...xx...:......xxx..:..:.....:......:.:......::x.:....:.--..:......xx:.x..... 10M1D85M2I19M 78/114 68.4% 116/94230402 0.0% 3/114 2.6% -7986374 -86244028 +3021 chr4 + 190214555 7869003 7869002 7869050 48 GAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAG chr4 + 94230402 73633586 73633585 73633633 73633586 73633585 73633633 48 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAG .:.:::....::......:....:.:.....:...:....:....... 48M 36/48 75.0% 48/94230402 0.0% 0/48 0.0% -65764583 -28465819 +3282 chr4 + 190214555 7869032 7869031 7869082 51 AAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAA chr4 + 94230402 57629739 57629738 57629788 57629739 57629738 57629788 50 AAAAAAGAAATGAAAAG-GAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ..:.......x......-...::...............:.:........:. 17M1D33M 43/50 86.0% 50/94230402 0.0% 1/50 2.0% -49760707 -44469695 +9923 chr4 + 190214555 7869036 7869035 7869238 203 AAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGA-----GAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAATAAAAGAGAAAGGGAAAGGGAAAGGGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGAAGGAAGGAAGGGAGGGATGGATGGAGGGAAGGAGGAAGGGGAAG chr4 + 94230402 73474949 73474948 73475152 73474949 73474948 73475152 204 AAGAAAGGGAAAAGGAAAGAGAAAGGGATCTGGAAAAGGGAAGAGAAAGGAATCaggaaaagaaaagagaaaaggaaaaggaaaaggaaaaggaaaaggaaaagg---aaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaataagaggaaatgaaagagtaaaagga-gaaggaaaaaaagggggaaggagaag ......:.:...::..............xxx:......::..:.....:..-----....::..........:.....:.....x.....:::..:..:....:.---.....::.....:.....:.....:...:......:...::.....:x..:::.:..x...:..:x::.:...-.:.x.:.:::....:......:.... 51M5I49M3D73M1D26M 146/199 73.4% 204/94230402 0.0% 9/199 4.5% -65605913 -28624489 +3336 chr4 + 190214555 7869095 7869094 7869194 100 AAGAGAAAGGGAAAGGGAAACGGAAAGAAA-------------AGAGAAAAAAG-AATAAAAGAGAAAGGGAAAGGGAAAGGGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGA chr4 + 94230402 57629675 57629674 57629788 57629675 57629674 57629788 114 AAGAATAGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ....:x.:x...x:..x::..:...:....-------------.....:x...x-....xxx:x:...::....x.:.....:.:......:.:.......:.:.....:.... 30M13I11M1I59M 69/100 69.0% 114/94230402 0.0% 14/100 14.0% -49760580 -44469822 +3504 chr4 + 190214555 7869146 7869145 7869226 81 AAAGGGAAAGGGAAAGGGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGAAGGAAGGAAGGGAGGGATGGATGGAGGGAAGG chr4 + 94230402 73744705 73744704 73744785 73744705 73744704 73744785 81 AAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAG ....x:x...xx.....:........:.:....:.:.....:..:...::::....::...:.x.:x.x.x..:x....:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -65875559 -28354843 +10746 chr4 + 190214555 7871911 7871910 7872108 198 ACACTGTAAGAAGGAAAAGCAGGCGTCAGAATGAGACTCACCTTTGGATGACTGTATTCTTAGCAGAATGTTGGTTATCACTGCCTTTTTCTCCCTGACAGTTGAGGTTAGATATTCATGGTCCAGGAGTTCAAGAAAGAGACGAAGTTCAACTATTAACTCTTCCATTGCTGACAACAAAAGAGGAAGAGTATTATT chr4 + 94230402 83576168 83576167 83576359 83576168 83576167 83576359 192 ACTCTGCAAGCGAGAAAA-CACACCCC----TGACACTGACCTTTTGATGACTGTATCCTCAGGAGAATGTTAGTTATTACTGCCTTCTTCTCCCTGACAGTGGAAGTCAGATATTCATGGTCCAGAAGTTCAAGAAACAGTCGCAGCTCAACTATTAACTCTTCCATGGCTGA-AAGACAATAAGAAAATTACTTTT ..x...:...x::.....-..x:.x:.----...x...x......x...........:..:..x........:.....:........:..............x..:..:.................:...........x..x..x..:....................x.....-..x.x..x.:...:.x..:.x.. 18M1D8M4D143M1D23M 157/192 81.8% 192/94230402 0.0% 6/192 3.1% -75704257 -18526145 +3023 chr4 + 190214555 7872920 7872919 7872965 46 TTTTTCCTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAACTACT chr4 + 94230402 37886826 37886825 37886871 37886826 37886825 37886871 46 TTTTCCTCTTTTTTTTTTTTGAAGAGGAAAAAAAAAAAACACTATT ....:.::............:..:.::............x....:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -30013906 -64216496 +3061 chr4 + 190214555 7874309 7874308 7874398 90 GAAAAACTTCCCAACTACCTATCTGTGGGAGGTCAGATTGCCTTTTTCTTTTTTTTTTTTTTTTTT-------TTTTTTTGAG----ACAGAGTCTTCCTT chr4 + 94230402 31877375 31877374 31877475 31877375 31877374 31877475 101 GAAACACAGCACAACAGCCTAGCTGTAAGAAATTACTTGGTTTCTTTCTTTCTTTTTTTTTTTTTTGATTTGATCTCTTTGAAGTCCACAGAGATTTGTTT ....x..xx.x....x:....x....::..::.:.xx.x.::.:.......:..............-------.:.:.....:----......x:..x:.. 66M7I10M4I14M 64/90 71.1% 101/94230402 0.0% 11/90 12.2% -24003066 -70227336 +3075 chr4 + 190214555 7897509 7897508 7897560 52 GTTTTTTTTGTTTGTTTGTTTTTGTGGTTTTTTTGACATGGAGTCTCACTCT chr4 + 94230402 88153964 88153963 88154015 88153964 88153963 88154015 52 GTTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTTTAAGAAGGTTTCAGTCT .........................x........xxx.x:::..:...x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -80256455 -13973947 +3268 chr4 + 190214555 7913250 7913249 7913332 83 CATGGTGTTGCACACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGCCTATGAGGCTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x.....:--...:..:...........::........x:xx.x.:.x.x.....:..:.x:..x:.x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -68119947 -26110455 +3346 chr4 + 190214555 7937236 7937235 7937290 55 AAAAGGAAAAAAAGGGGAAGAAGAAAAGAAACTTCCACTTTAGAATCCACATTTT chr4 + 94230402 33765651 33765650 33765705 33765651 33765650 33765705 55 AAAAAAAAAAAAAAACCAAGAAGAACAGTAACTACCACTGTAGAATCCACATTTT ....::.......::xx........x..x....x.....x............... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -25828415 -68401987 +3504 chr4 + 190214555 7955020 7955019 7955093 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAAGAAAATTACTTGAACCCAGGAGGTGGAGGTTGCGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x:..x:............:..x.xx:..:..::. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -68078184 -26152218 +3115 chr4 + 190214555 7956024 7956023 7956090 67 TGTAATCCCAGCTACTCTAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.........:x.:........x.xx.x...x::...........:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -68077187 -26153215 +8289 chr4 + 190214555 7966992 7966991 7967122 131 AGAACAAAAGGGCTTTCTTCTTAAGGTCATTCCTCTTCCAGAGGGCCAGGCGGTCAAACTCCTCGATGCTCATCCCAAACACTTCCTGGAACTCCTCGGGCGACAAGTGTCTCTTC-AAACAAAAAGGCAAA chr4 + 94230402 83637962 83637961 83638093 83637962 83637961 83638093 132 AGAAAAGCAGGGCCTTTTTCTTCAGGTCATTCCGCTTCCAAAGTGCCAGGCGATCAAACTCTTCAATGCTCATTTTGAAGACTTCCTGGAACTCCTCAGGGGACAAATGTCTCTTCAAAATGAAAACACAAA ....x.:x.....:..:.....x..........x......:..x........:........:..:........::::..x.................:..x.....:.........-...::....x:.... 116M1I15M 107/131 81.7% 132/94230402 0.0% 1/131 0.8% -75670970 -18559432 +3829 chr4 + 190214555 7968992 7968991 7969074 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:.........:..:........x.xx.x...x.:...........:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -68064205 -26166197 +3111 chr4 + 190214555 7969709 7969708 7969747 39 TCTCTCTTTCTCTCTCTCTCTGACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::....:.............x................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -67278341 -26952061 +7116 chr4 + 190214555 7983259 7983258 7983626 368 CTTACCTCCAGTCTCGTCCGGTCCACGTCTTTGGGCAGTTTCACGCGAATTCGGTTTGTGACGATGAGGGAGTCATACGGATAGATCTGTT-GGGGGAGGAAACCACAGGGTCACCTCACGAAGCAAGT----GTATGCTGGCACCAAAGAACTGAGCAGAAGGTCA--CCGAGAATACATACTTGCGTCTGCACCTGACACACACATTTCATAGG----------------TAAAGCAC----------------------------AACAGAAAGGACTTTTAACCTGGGCAGGTGTGGCGCGGCACGGAGGT--------------------CAGTGTGGGAGCGGCCCCGCTTACCTTGTATTCTGTAAGAGAGAGAGAGCGGAGACCACGAAATGGTTTAGAAAGTGCAAGATGTCGTCCAAGGTGAGTGCAAT chr4 + 94230402 83653452 83653451 83653881 83653452 83653451 83653881 430 CCTACCTCCAGTCTGGTCCTGTCCACATCCTTGGGCAATTTCACACGAACTCGGTTTGTTACAATAAGTGTCTCATAAGGATAAATCTGTTAAAAAGACAAAAGCATATGAACTCCAGCCAAATCTGATTCTGATATGTGGAAATGACAGCATGGGGGACTTACTAATTTCAATGGTACATACTTGCATCCTCACTTG--ACAAATATTTCACTGGGTCAAAATTGACaaaataaagtaaaaaaaaagaaaaagaaaaaaaaagaaagaaaagaaaagaaaagaaaaagGAACACATGTAACCTTGCTAGGAAGTGCTGAATCTGATTGTTCTTCCAGTGTTGGAAAAGCCCTTCTTACCTTGTATTCTGCAAGAGAACAAGAATAGGTTC------ACAGTTTAGAATTTAT-AGGCATCTTTTAGAGTGACCATAAT .:............x....x......:..:.......:......:....:.........x..:..:..x.xx.....x.....:.......-::::..x:...x..:.x.:x.x..xxx.:..x.x::.----:....:x.:x.:x.x..x.:x.:.x.xxx:x.x.--:.:.x::...........:..:x...:..--...x.:......:x..----------------.....:.x----------------------------..x.....:..xxxxx..xxx.::..x:...::.x:x..xx...:..--------------------......x...:x:....:x................:......:x:...:::.:xx.------.::........xx.::-..:::..x.::.::....x:::... 91M1I37M4I34M2I29M2D16M16I8M28I47M20I56M6D16M1D25M 233/359 64.9% 430/94230402 0.0% 80/359 22.3% -75670193 -18560209 +3441 chr4 + 190214555 7984834 7984833 7984911 78 TGTACCTCGCATGCCCCAGCTGGCATCCGGGTCTGCTCCACAGGGGGCCAGATTGGCATTCTGGAAGAGAAAGAGAGG chr4 + 94230402 83655252 83655251 83655329 83655252 83655251 83655329 78 TGTACCTTTCATCCCCCAGCTCGCCTCCTGGTCTGTTTCATATTGGCTCATGTTTTCAGGCTAGAAGAGAAGAAAAGG .......:x...x........x..x...x......:.:..:.xx..x:..x:..xx..xx..:........::.:... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -75670418 -18559984 +4286 chr4 + 190214555 7992860 7992859 7992961 102 ACCTACCCGCTGGTCCAAGCCATTCTTTCCATGTCCTGGGAGAGGGTCAGATTTGGAATAGGGGAATCCTGAAACAGACACAGC--ACAGCTTTGTCACGCGCG chr4 + 94230402 83657918 83657917 83658018 83657918 83657917 83658018 101 ACCTACCTGATG---CAAGCCATTCCTTCCATACCCAGGTAGAGAAGTAGATTTAGAATACGGAAATCCTATAAAAGACATGATAGACAGCTACATCATTCGTG .......:.x..---..........:......::..x..x....::x:......:.....x..:......:x..x.....::::--......x::...:x..:. 12M3D69M2I18M 72/99 72.7% 101/94230402 0.0% 5/99 5.1% -75665058 -18565344 +3801 chr4 + 190214555 7993541 7993540 7993619 79 GTGGTGCACGCCTGTGGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGGATCCCTTGAGCCCAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--...:..:.......:...::........x:xx.x.:.x.x.....:.....:..:.:x:.....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -68039660 -26190742 +3175 chr4 + 190214555 7997841 7997840 7997926 86 CTGATTCTTCTCAGTGTTAGTATCTGCTGTCTTTTTTTTCTTTTTTTCTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAG chr4 + 94230402 22796697 22796696 22796778 22796697 22796696 22796778 82 CTGTCTGCTGTCAGTAATTGTACCTGCTGTCTTTTTTTTCCTTTTTTTTTTTCCGCACAAGGTGG----CAACACTTTCTGCTCAG ...x:.x:.x.....:x.x...:.................:......:....::x:x::..:...----:x..x...x:...:... 65M4D17M 57/82 69.5% 82/94230402 0.0% 4/82 4.9% -14798856 -79431546 +4480 chr4 + 190214555 8009036 8009035 8009211 176 CTCCCTGGC-ATTACCTTCCTGTTATCCTGGTCCAAGCTTCCATCCTCCCCATCCGATCGCCTGGCAGCTGGAAGGGAAAAATCCATTTGTAAAGGCCACAC--ACCATTGCTTGTGGGTTTCTGCCTCA--TGGTTTCCCATGTTACAGTTATGCTCAAAA--ATGAAAAATCAATCAAAGA chr4 + 94230402 83664451 83664450 83664627 83664451 83664450 83664627 177 CTTTCTGGTTATTACCTTCTTGTTGTCCTGATCCAGACTTCCATCCTCCCCTTCTGATCTTCTTAGTGCTGAAAGattaaa----ttttttaaaattaaaaCTGATCGATCATTTTTGTTTTCTGTTTTGACTGTCTTCACCTTCTACA--TATTTTCAAAAGGAGAAAAAAGCAATAAAAAA ..::....:-.........:....:.....:....::..............x..:....x:..x:xx....:...:xx...----x...x....:x:x.x..--.:.:x.xx..x.x.x......::.::--..x:...x.x.x:....--...x:......--.x:.....x....x...:. 9M1I71M4D17M2I26M2I17M2D11M2I19M 118/170 69.4% 177/94230402 0.0% 13/170 7.6% -75655415 -18574987 +8475 chr4 + 190214555 8019573 8019572 8019735 163 AGGCATGCGGGGCAAACCACAGCAGCGGGAGGAATCCAACCGTACCATGCTGTCTGTAGATAGGGGGTTTCCTATAGATGTTATCTTTTACGCCAGTGTCTGGGGAAGAAGAAAGAAAAAAAAGGAGAGAACAGGAGGGTAAGC-AGCAAGTTGTGATGGTTTC chr4 + 94230402 83668562 83668561 83668718 83668562 83668561 83668718 157 AGATATGTAGAG-AAACTGCAACAGAGAAAAG---CAGACTGTACCATGCTGTTTGTAGATAGGAGGTTTCCTATAGATGTTATCTTTTACGCCAGTGTCTGAGGAAGAGGAAAG---AGAAAGGAAAAAATAAAAGAGTAAGCAAGCAGACTATGCTGTTCTC ..::...::.:.-....::..:...x.::.:.---.x:..:............:..........:.....................................:......:.....---.:......:.:..:.::..:......-....:::.:..x..x.:.. 12M1D19M3D80M3D26M1I19M 123/156 78.8% 157/94230402 0.0% 8/156 5.1% -75648989 -18581413 +10906 chr4 + 190214555 8020196 8020195 8020393 198 GCCTACCTGGGACGTGGAAGTGGCGAGGTGCCTGCTGGTAGGTGGAGGGGGGCGGCTTGCTGTCAGAGAGCACGGAGAGGCTGGGGGTGCTCCGGCCACTTTCACTGCCTCCAGACGGAAGGGCAAAGGCAGCAGATAGAAGGGGAAACG-GGAAAGCAAAGTAGAATATTTCAAGCATGAAAAGCTTATTTGCAGCGA chr4 + 94230402 83669865 83669864 83670062 83669865 83669864 83670062 198 GCCTACCTGGAATATGGAAATGCCTAGGAGCCTGCTGATAGACAGAAGGTGAAGATTTGCTGTCTGAGTACATGGATAAGCTTGGAGTGCTCCGACCACTTTCACTGCCTCCAAGGGGAAGAGCAAAGAAAGCAGATACAAGAAAAAAAATGGAAAGCAAAGTAGAGTATTTCAAGCAT-AAAGGCTTGTTCAGAATGA ..........:.::.....:..x.x...x........:...:::..:..x.:x.::........x...x:..:...x.:...x..:........:..................::x.....:......:x........x...:::...x:-...............:............-...:....:..::x.::.. 150M1I28M1D19M 151/197 76.6% 198/94230402 0.0% 2/197 1.0% -75649669 -18580733 +3003 chr4 + 190214555 8021251 8021250 8021306 56 TTTTGCGAACAAGGTTGGATTATCAAGTCACGCATCCAGAGGGCCGAGGTGACCTG chr4 + 94230402 83670519 83670518 83670574 83670519 83670518 83670574 56 TTATGCAAACAAAGTTGGATTATCAAGTCATGGATCTATAATGCCATAGTCACTTG ..x...:.....:.................:.x...:.x.:x...:x:..x..:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -75649268 -18581134 +3220 chr4 + 190214555 8022926 8022925 8023004 79 TCCTCTTCCTCCTCCTCCTCCTCTTCTTTTTCCTCTTCCTCCTCTGCCTCCTCTTCCTCTTTTTCCTTTCTCCTCCTCC chr4 + 94230402 53757784 53757783 53757862 53757784 53757783 53757862 79 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCC .:.......x:..::.:.x......xxx.::..:.::..:..:.:x...::.:..:.::.....:....:.::...:.. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% -45734858 -48495544 +9387 chr4 + 190214555 8027753 8027752 8027981 229 CCTTACCTCGGAAGTAGGGGATGTAATGATGTCTGAACACGGATGTAGGGCTTGGGTGTTGGGACAGGGAGAGGCAGCTACTGGTACCCACACTCACAGTACCAGCTACGGGGTAACAGAGAGCAAGTCAGAGTCAAC--CTGGGCTGGCTGGTGCAACGCCACACA-TATTCCTCATCCCCACTCTGCTACGAACACTGTTGCTTCCTCT-----CTTGAGGAATGCACAACTTTT chr4 + 94230402 83675427 83675426 83675657 83675427 83675426 83675657 231 CCTTACCTTTGAAGAAAGGGATGTAATGATGTCTGAATGTAGATGTAGGGCTTGGGTGTTGGGGCAGGGAGATGCAGCTACTGGTACCAAGACTCTGAGTACCAGCTG-GGGGCAACAGAGAGTAAGTGAAAATAAACTATTTAGTTCACTTACTGAAAGCCACAAATTACAACGCCATCCTTCTTTTTCAGGAACATT-----TTCCTCCTGATGCTTAGAAAACGTACAGTTTTT ........:x....x.:....................::::......................:........x...............x.x....xx..........:-....:.........:....x.:.:.x...--:.x:.:.x:..x::xx..x......x.-..:xx.x.xx:..:x..:.x::.x.....:.-----......:-----...::::..:.:...::.... 108M1D29M2I27M1I31M5D7M5I21M 165/223 74.0% 231/94230402 0.0% 14/223 6.3% -75647674 -18582728 +4314 chr4 + 190214555 8032580 8032579 8032713 134 GTGGTTATGTTTATAACCCAGGCAGCAGCGCCACGGCAAGCGGGGACAGGCGAGAGGGTGGTGGTTACCTCGGTCGGCGTTGGCGAGAGCAACTGAGGGGACTGTGGACA-CAACACACAAAGTGGCCATTAGTG chr4 + 94230402 83680043 83680042 83680167 83680043 83680042 83680167 125 GTGACCAGGTTTATGCATCACAAAATGG-GTCAGAACAAGCGAAGAAAGGCAC-----TGGGGATTACCTCAGTAGGTGTTGGAGAGAGCAACTGAGGTGACTGCAAACAGCAACACACAA----GAAATTAGTG ...:::.x......:xx:..x:x.:::.-.:..x::......::..x....:x-----...x.:.......:..x..:.....x..............x.....:::...-..........----.xx....... 28M1D24M5D52M1I10M4D10M 89/124 71.8% 125/94230402 0.0% 11/124 8.9% -75647463 -18582939 +10729 chr4 + 190214555 8036142 8036141 8036312 171 TCCATACCTCGCCGTAGCTCTGCCTGTCCCCTGCAGAGTGGCTGATGTAGGGTGAGTAGGAGATCATGTCGGGGCGGTCGATGTCATAGATGGCCTTACTTTTAGGAAGGGCTGCCAAGTCCCTGTAGTCCAGGATCTCACCACCAAGCTTGGCCTGAGAGGGGAAAGAGA chr4 + 94230402 83682850 83682849 83683020 83682850 83682849 83683020 171 TCAGTACCTCCCCGTAACTATGCCTGTCATCTGAAGAGTAACTGATATATGGAGAATAGGAGATCATATCTGGGCGGTCAATGTTATAGATGGCTTTATTTTTAGGAAGAGCAGCCAAATCCCTGTAGTCAAGAATTTCATCTCCAAGCTTTGCCTAAGAAAAGGAGGAAA ..x:......x.....:..x........x:...x.....::.....:..x..x..:...........:..x........:....:.........:...:..........:..x.....:...........x..:..:...:.x........x....:...:::.:.:..:. 171M 135/171 78.9% 171/94230402 0.0% 0/171 0.0% -75646708 -18583694 +3438 chr4 + 190214555 8042703 8042702 8042781 79 GTGGCACATGTCTATAATCCTAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGGGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:..--:..:.:.:..........:........x.xx.x...x.:...........::.x.xx:..:..:.. 11M2D66M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -67990498 -26239904 +6428 chr4 + 190214555 8045158 8045157 8045259 102 ACTTACATAAATCACACGGCTCGGAGACCCTGAGGTGCTGGAAGCAGGGACAGAAATGATGCTCTCTGAGGAAGTTCTGGTTTCCTGAGAAAGGAGAGAGGA chr4 + 94230402 83687402 83687401 83687503 83687402 83687401 83687503 102 ACTTACATAGATCACACGGCTTGGGGAACCTGATGTACTTGAAGCAGGTACAGAAATTATACTCTCAGAGGAAGTCCTTGTTTCCTATGGCAGGAGAAGAGA .........:...........:..:..x.....x..:..x........x........x..:.....x........:..x.......:x.:x......:::.. 102M 82/102 80.4% 102/94230402 0.0% 0/102 0.0% -75642244 -18588158 +3956 chr4 + 190214555 8054186 8054185 8054249 64 ACCTTGTTTCTGTCTTCAGTTCTGGCTGCTTGTCGACACGCCGGATGCCAGATGGAGGAACCTG chr4 + 94230402 83691635 83691634 83691698 83691635 83691634 83691698 64 ACCTTGTTTTTTTCTTCAGTCTTAGCAGCCTGTCTACAAACTGGATGCCAGATGGATGTACCTG .........:.x........::.:..x..:....x...x:.:..............x.x..... 64M 51/64 79.7% 64/94230402 0.0% 0/64 0.0% -75637449 -18592953 +3973 chr4 + 190214555 8059767 8059766 8059848 82 ATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::........:.--....:.:...........:.........x.xx.x...x::...........:..x.xx:..:..:.. 13M2D67M 60/80 75.0% 80/94230402 0.0% 2/80 2.5% -67973431 -26256971 +3172 chr4 + 190214555 8065112 8065111 8065194 83 CATGGTGGCTTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATACTTTGAGCTCAGGAGCTCTAAGTTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x:xx.x.:.xxx:....:.:...:....:.::.:.::.. 8M2D73M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -67968085 -26262317 +3387 chr4 + 190214555 8066288 8066287 8066368 81 AGAGAGAGACTATGTCTCAAAAAAAAAAAAAAAAGAAAAAAGAAAGGAGGGAGGGAGAGAGGGAG-GGAGGGAGGGAAGGAA chr4 + 94230402 85790944 85790943 85791024 85790944 85790943 85791024 81 AGAGA-AGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAA .....-......x:.:xx..:..:...................::......:..x.:..:.:..:-:..:x:x...:..:.. 5M1D59M1I16M 58/80 72.5% 81/94230402 0.0% 2/80 2.5% -77724656 -16505746 +3144 chr4 + 190214555 8066292 8066291 8066365 74 AGAGACTATGTCT----CAAAAAAAAAAAAAAAAGAAAAAAGAAAGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAAG chr4 + 94230402 77211978 77211977 77212055 77211978 77211977 77212055 78 AGAAATCATGTGTGAGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAG ...:.::....x.----....x.::...:::........x:..:..::.....:........:.x:..:x.:.:.... 13M4I61M 51/74 68.9% 78/94230402 0.0% 4/74 5.4% -69145686 -25084716 +3799 chr4 + 190214555 8078688 8078687 8078757 70 GACCCTGGGCAACTCACTTAACCTCTCTGAGCCTCAGCTTCCCCAACTGCATAATGGGGGAAATAATAGT chr4 + 94230402 83501141 83501140 83501210 83501141 83501140 83501210 70 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAAT ...:........x.:.........x.x..x.......:..:....x...:.x.....:.xx:...:..:. 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% -75422453 -18807949 +10131 chr4 + 190214555 8080661 8080660 8080817 157 CCTCCCCCCACTTACTTGCTGATGTACTCGGCATTCAGGAGCTTCCCACAGCTCTTGCACTTAAAACAGCCCAAGTGCCAGTGCTTGTCCAAGGCTACCAGGGCCTGGCCATTCTTGATTTCTGTGCCGCAGCCCCCACAACCTGGAAGAAAGAGAA chr4 + 94230402 83710173 83710172 83710329 83710173 83710172 83710329 157 CCCCACTCAACTTACTTGCTGATGTACTCTGCGTTCAGTAGCTTGCCACATGTATTGCACTTAAAACAGCCCAAATGCCAGTGTTTGTCCAAGGCAACCAATGACTGCCCATTTTTTATTTCTGAACCACAGCCTCCACAATCTGCAAGAGAGAAAA ..:.x.:.x....................x..:.....x.....x.....xx.x....................:........:...........x....:x.x...x.....:..x.......x:..:.....:......:...x....:...:.. 157M 129/157 82.2% 157/94230402 0.0% 0/157 0.0% -75629512 -18600890 +6633 chr4 + 190214555 8088140 8088139 8088297 158 CAACATGCCCCCACTCAGCGCCCACTTACTTCGGAGGCCCTG----GGACAGGTGC--GCGCTGCTGCCCACCGATACGGGCAGGGAACACTTCTGGCACATGCATTCCTTCCCGTTGAAGGTCACTCGGTCCCCGGGGGGGAAGGGCAGCCTGAAACAAGAGA chr4 + 94230402 83714517 83714516 83714674 83714517 83714516 83714674 158 CAACAGAACACAGCACAACTCCCACTTACTTCGCAGGTTCTGTACAGGGAAAGAGCCAGTGCTGCTG------GAAGGGGGCAGGGAGCACTTCTGGCAGATGCACTCTTTGCCATTAAAAGTTACCCGGTCACCTGCAGGGAAAGGCAGCCTACAACAGAAGA .....x:x.x.x:.x..:.x.............x...::...----..:x.:.x..--.:.......------..x:x.........:...........x.....:..:..x..:..:..:..:..:.....x..x.x:.....:........:x....::... 42M4I10M2I9M6D91M 113/152 74.3% 158/94230402 0.0% 12/152 7.9% -75626377 -18604025 +3117 chr4 + 190214555 8089592 8089591 8089664 73 ATGCATGGTGGTGTGCACTTGTAATCCCAGCTACTTGAGAGGGTGAGGCAGGACAATCGCTTGAACTGGGAGG chr4 + 94230402 76033194 76033193 76033264 76033194 76033193 76033264 71 ATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:..::......--...x....:.:............:...x....x.xx.xx..x.:.......:x:..:. 13M2D58M 52/71 73.2% 71/94230402 0.0% 2/71 2.8% -67943602 -26286800 +3436 chr4 + 190214555 8091645 8091644 8091797 153 ATATATTATATAATTATATATTATATAAAATTATATATAATTATATATTATATAATATACATAATATAATTATATAATATATATTATATTAATATGTATTATATATTAATATTATATATTTATTATGC----ATTTATATATTAATAATTATAGAAT chr4 + 94230402 63893113 63893112 63893267 63893113 63893112 63893267 155 ATATACTATTTAGATATATTAGGTATAATATTAGATATAATTAGATAATAGAAGATATAAAATTTATGAATAGGTGATATACAGTTCAATTATTTAAATTATTCAT--AAACTATAATTTTCTGGTTCGACTAATAATATCCTAATAAACATCAAAT .....:...x..:x.....xxx:.....x....x.........x...x..x.x:.....x.xxx...:.x..x:.:.....:.x.x:.x.x..x.:x.....x:..--.x.:....xx...x.x:.x.----.x.x....x:......x:..x:... 106M2D20M4I25M 100/151 66.2% 155/94230402 0.0% 6/151 4.0% -55801468 -38428934 +3601 chr4 + 190214555 8094965 8094964 8095080 116 TCCTTCCCTCCCTTTCTTTCTCTTTCTTTTCCTTTTTCTTTCTTTCTCTCTCTC-TCTCCCCCCACTTCTTTCCTTCCTTCCTTCT-----TTCTTTCTTTCTCTTTCTTTCTTTCTCTCTC chr4 + 94230402 82976631 82976630 82976751 82976631 82976630 82976751 121 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTT-TTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTC .:..x:.:x:.:...x......:.x.......x.:.x....:.x.x.xx.....-....:..:.x..:........-:...:x...-----::....x..x:....:...:x.....:::.. 54M1I21M1D9M5I31M 79/115 68.7% 121/94230402 0.0% 7/115 6.1% -74881666 -19348736 +3340 chr4 + 190214555 8094967 8094966 8095097 131 CTTCCCTCCCTTTCTTTCTCTTTCTTTTCCTTTTTCTTTCTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTTCCTTCCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTT chr4 + 94230402 63972024 63972023 63972142 63972024 63972023 63972142 119 CTTTTACCCTTTTCCTTCTCATTGTTTTCCTCTTCTTTATTTACCCTGT------------ATTTAATTCTTCACATTCAGTTCTCAATGTTTCTCTTTCTCTCTTTTGTTCATTCAATTTTTGTCTCTTT ...::x:..:....:.....x..x.......:..::..x:..x.:..x.------------.:..xx...:.:x.x.:.xx:.:..xx.x...........:.....:x:..x:..xx.:...x.:..... 49M12D70M 77/119 64.7% 119/94230402 0.0% 12/119 10.1% -55877057 -38353345 +3075 chr4 + 190214555 8094976 8094975 8095076 101 CTTTCTTTCTCTT---TCTTTTCCTTTTTCTTTCTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTTCCTTCCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTC chr4 + 94230402 89201214 89201213 89201317 89201214 89201213 89201317 104 CTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTC ..:..x.x..:..---.x....:.....:....:....::.:xxx..x.x.::::x:.x:.xx...::..:....:...:....x.x.:...:...:..x.... 13M3I88M 64/101 63.4% 104/94230402 0.0% 3/101 3.0% -81106238 -13124164 +3121 chr4 + 190214555 8094987 8094986 8095039 53 TTTCTTTTCCTTTTTCTTTCTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTT chr4 + 94230402 53459265 53459264 53459317 53459265 53459264 53459317 53 TCTCTTTCCCTTTGCCCTCCTTTCTGCCTCTCCCTCCCCCCTTTTTTTTTCTT .:.....:.....x:.:.:......x:.....:........x:..:...:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -45364278 -48866124 +3327 chr4 + 190214555 8095006 8095005 8095124 119 CTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTTCCTTCCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTCTTTCCTTTTCTTTCTTTTCTTTCT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTT-TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ....x.::.....::.:..xx:::..-.:..:..::.....:x..::.:.x....xx.:.:.x....xxx.::.:x..:.:.:x.xx.........::...:..:.:.:.:...:..:. 26M1D92M 70/118 59.3% 118/94230402 0.0% 1/118 0.8% -55602111 -38628291 +12408 chr4 + 190214555 8097093 8097092 8097293 201 ACTCACCGGCAGACGGCACACACGAAGCAGTCGGGGTGGTAGGTCTTGCCCAGCGCCGACACCACCTCACCCTCAATGAACTGGTCGCAGCTGAAGCAGCGGGTGCCGTAGAGCCTCTGGTAGTCCAGCGTGCAGATGTACTCGCCCTGCCGCACGAAGAAGCCGCCCTCGGCCAGGTCGCAGCCACATGCTGGGGGAGGA chr4 + 94230402 83722491 83722490 83722691 83722491 83722490 83722691 201 ACATACCTGCAGACAGCACACACAAAACAGTCTGGGTGATAGGTTTTGCCCAGTGCTGAGACCACTTCTCCCTCAATGAATTCATCACAACTGAAGCACCGTGTGCCATAGAGTCTCTGGTAGTCCAAAGTACAGATGTAGTCTCCCTGTCTCACGAAAAATCCTCCTTGAGCCAGGTCACATCCACAAGCTGCAGGAAGA ..x:...x......:........:..:.....x.....:.....:........:..:..x.....:..x...........:.x:..:..:........x..x.....:.....:.............:x..:........x..x.....:.x......:..x..x..:.x:........:..x.....x....x:...:.. 201M 159/201 79.1% 201/94230402 0.0% 0/201 0.0% -75625398 -18605004 +8620 chr4 + 190214555 8106486 8106485 8106671 186 ACACTCACCTTTACAGACGAAGCACTTGATGTGGAAGTACTTGTCCTGCACCCGCAGCACCTCGCCCTTGCACACATTCCCACACGTGTTGCACAGGATCGCCGTGCTGGGCGACTTCTCCAGCGGGCTGGGAGCAGCCTGGGGCTGCGACACTGTTGGGAAAGAGAGAAG-AGCAGCGTTCAAGGG chr4 + 94230402 83737594 83737593 83737780 83737594 83737593 83737780 187 ACACTTACCTTTGCAAACAAAGCACTTAATATGGAAATATTTGTTCTGAACTCTCAAAACTTCTCCTTTGCATGGTTTTCCACAGGTATTGCAGAGAATTGCAGTACTTGATGGCTTCTCCAGTTGGCTGTGTACAGCCTGCGGTTGTGAAACTGCAGGAAAAACAAAAGGTAGAAGGTTTTAAAGG .....:......:..:..:........:..:.....:..:....:...x..:.x..:x..:..x..:.....::xx..:.....x..:.....x..:..:..x..:..x.::.:.........:x.....x.x:.......x..:..:..x....:x..:...:x:.:.:.-..x..xx..:..:.. 171M1I15M 131/186 70.4% 187/94230402 0.0% 1/186 0.5% -75631108 -18599294 +3165 chr4 + 190214555 8111790 8111789 8111856 67 GTGGTACACACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTG-AACCCAGAAG .....:...:--....:.:.........:..:........x.xx.x...x......-.....:.:.. 10M2D44M1D10M 51/64 79.7% 64/94230402 0.0% 3/64 4.7% -67921411 -26308991 +3197 chr4 + 190214555 8180607 8180606 8180684 78 CTGTGTGTGTGAGAGTGTATATATGTGTACATATGTGAGTGCACCTGTGTATATGTGCATGTGTGTATGTATGTGCAC chr4 + 94230402 60622290 60622289 60622367 60622290 60622289 60622367 78 CTGAGTTTGTGAGTGTGCGTGTACATGTGCATGTACAACTGTATGGATGCTCATAGGCATGTTTGCATGTACGTGCAC ...x..x......x...::.:..::...:...:.:::.x..:.:xx:..:x:..:x......x..:.....:...... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -52441683 -41788719 +4127 chr4 + 190214555 8180639 8180638 8180807 169 ATGTGAGTGCACCTGTGTATATGTGCATGTGTGTATGTATGTGCACACATGTGTATGTGCATATGTGTATATATGTGTATCTGTGTGCATGTATGTGTATGCATGTGTGCATGTGTGTGTATATATGTGAATGCACCCGCATGTATGTGTATGTGTGTAGGTATGTGCA chr4 + 94230402 21109139 21109138 21109295 21109139 21109138 21109295 157 ATGTCAAAGCATCGGTGTATGGGC-------TGAGCGTATCTGAAAA-----ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCA ....x.:x...:.x......:x.:-------..x::....x..x.x.-----:..x.x:x..x..:x....:......:...x....x::....x.:....:.:x:::::..::x:.....:x...::.x...:..:.::::x.x.......:......x.x..:.... 24M7D16M5D117M 98/157 62.4% 157/94230402 0.0% 12/157 7.6% -12928500 -81301902 +4175 chr4 + 190214555 8180702 8180701 8180852 151 TGTGTATATATGTGTATCTGT-GTGCATGTATGTGTATGCATGTGTGCATGTGTGTGTATATATGTGAATGCACCCGCATGTATGTGTATGTGTGTAGGTATGTGCACATGTGTGTATGTGTATATGTGTGTGCATGCATGTATGTGTATGT chr4 + 94230402 5214182 5214181 5214321 5214182 5214181 5214321 140 TGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATG--GGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTT----------GCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....x....:x.:::.x.x.:-.....x..:..:x:...--x.:::....x:......::::.x...xx.....x.:...x..:.......::.x.----------:.........::.::x.::..............x:.:....:.::. 21M1I17M2D55M10D46M 91/139 65.5% 140/94230402 0.0% 13/139 9.4% 2966520 NA +3507 chr4 + 190214555 8180703 8180702 8180849 147 GTGTATATATGTGTATCTGTGTGCATGTATGTGTATGCATGTGTGCATGTGTGTGTATATATGTG---AATGCACCCGCATGTATGTGTA-TGTGTGTAGGTATGTGCACATGTGTGTATGTGTATATG---------TGTGTGCATGCATGTATGTGTA chr4 + 94230402 79265519 79265518 79265678 79265519 79265518 79265678 160 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA ....:.:.:....:..x......xx.....:.::..:..:.......:::.::x::....x....---.xx:....:x:..:..x:..:.-.x..:x.xxx.:x...:...x:..::.x.x....x:..---------...:.x:..:...x....x... 65M3I22M1I38M9I22M 93/147 63.3% 160/94230402 0.0% 13/147 8.8% -71084816 -23145586 +3679 chr4 + 190214555 8180811 8180810 8180948 138 GTGTGTATGTGTATATGTGTGTGCATGCATGTATGTGTATGTATATGTGCACATGTATCTGTGTGTCCA-------TGTGTCTGTGTGCAC---------ATGTGTATGTGTATATATGTGTGTGAGT-----GCACTTGTGTTTATGTGTATGTGTGT chr4 + 94230402 79265519 79265518 79265677 79265519 79265518 79265677 159 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGT ......:.....::.........xx..:..:..::.::.:..:.:::::.:..x::..x.x........-------.x.:.x.:x:.....---------x..x..:.:::x..::..x.x...:...-----........:.....:::.x.:..x.. 69M7I15M9I28M5I26M 89/138 64.5% 159/94230402 0.0% 21/138 15.2% -71084708 -23145694 +3121 chr4 + 190214555 8180814 8180813 8180860 47 TGTATGTGTATATGTGTGTGCATGCATGTATGTGTATGTATATGTGC chr4 + 94230402 65759992 65759991 65760038 65759992 65759991 65760038 47 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTAC ...:x..:.:.............:.....x.......::......:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -57579178 -36651224 +3081 chr4 + 190214555 8181035 8181034 8181111 77 CTGTGTGTATGTGTATATGGGTATATGTATGTGCACACGTGTGTGTATGTGTGCATATGTGTGTGCGTGCATGTATG chr4 + 94230402 27325481 27325480 27325557 27325481 27325480 27325557 77 CTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...x.x.x.x:..::....:x.:...::.:x..x..x::x:.:...:......:..:.......:...:...:.... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% -19144446 -75085956 +3307 chr4 + 190214555 8181046 8181045 8181121 76 TGTATATGGGTATATGTATGTGCACACGTGTGTGTATGTGTGCATATGTGTGTGCGTGCATGTATGTGTATGCATG chr4 + 94230402 3414925 3414924 3415000 3414925 3414924 3415000 76 TGAAAATGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGAGCTCGCCTG ..x.x......:.::x......::..:....x............:.xx..:...:..:...::.x.x.:x:..x.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 4766121 NA +3698 chr4 + 190214555 8198814 8198813 8198961 148 TGTGCATACGTGTGCCTGTCCATGTGTGCACACACTTGTGCTTGTGAGTCTCTGTGTGCCCATGCATATGTATGTGTGTCTGCATGCACATGCGTGTGTGTGTGCATGCATGTATGTGTGCAGGCATGCGTGTGTGTGTGTGTGCAGT chr4 + 94230402 21109190 21109189 21109330 21109190 21109189 21109330 141 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-------GTTTCTGTGGGTGTACAGT ..:x:....:....:x.x..::..x.:.:.:x:.:x...:..::::x:.x:::....:..:..:.:......:x::..::.x::..:.:...:..:..x:.:........::::x.xx.:..-------..x.x....x....:.... 122M7D19M 81/141 57.4% 141/94230402 0.0% 7/141 5.0% -12910376 -81320026 +3364 chr4 + 190214555 8210628 8210627 8210692 65 TGGCGCATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033202 76033201 76033264 76033202 76033201 76033264 63 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:...:.--....:.:.......:...::........x.xx:x...x.............:.. 9M2D54M 49/63 77.8% 63/94230402 0.0% 2/63 3.2% -67822574 -26407828 +3095 chr4 + 190214555 8211118 8211117 8211220 103 TCCCCCTCCTGGTTTCTCCCCTCTACCTCCCTCTCCCCCCACCTGTTTTCTC------CCTTCTCCCTC---------CCTCCTTCCTCCCCTTTTCTCCCCACTCCCTCCCTCTCCC chr4 + 94230402 92917624 92917623 92917741 92917624 92917623 92917741 118 TCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .......:::x.::.:.::.....xx..:....:......x..:x.:.....------:.......::.---------.x.:::...x:.:x..:...x:.....::.:.:.:..x.. 52M6I11M9I40M 66/103 64.1% 118/94230402 0.0% 15/103 14.6% -84706506 -9523896 +6884 chr4 + 190214555 8214464 8214463 8214586 123 TTTCTCTTAAGGAATTATCAGCCAGGCTGCTGTCCATCCACAGTGACCAGGACCGGATCGTGGTGACGTTTAAGACTTTTGAAGAAATCTGGAAGTTTTCCACCTACCATGCTCTCGGTAAAG chr4 + 94230402 83797423 83797422 83797545 83797423 83797422 83797545 123 TTTTTGTTTAGGAACTCTCTGCTAGATTGCTCTCTATTCACAGTGATCAAGACCTAATCGTGGTGACATTTAAAACTTTCGAGGAAATATGGAAGTTTCTAACTTACCACTCATTGGGTAAAG ...:.x..x.....:.x..x..:..::....x..:..:........:..:....x:...........:.....:.....:..:.....x.........::x..:.....:x.x:.x....... 123M 93/123 75.6% 123/94230402 0.0% 0/123 0.0% -75582959 -18647443 +31070 chr4 + 190214555 8227132 8227131 8228659 1528 CCCGAGGAGCCCTCCTTCTGCTTGGAAGCCGAGGACGACTGGGAGGACCCAGAGGCCCTGAGCTCACTGCTGCTGTTCCTGAACGCCCCTGGGTACAAGGCCAGCTTCCGTGGCCTGTACGATGTGGCGCTGCCGTGGCTGAGCAGCGTGTTCCGCAGCTTCAGCGACGAGGAGGAGCTGACTGGGCGCCTGGCACAGGCCCGGGGGGCGGCCAAGAAAGCTGGCCTCCTCATGGCCCTGGCCAGGCTCTGCTTCCTCCTGGGGCGGCTGTGCAGCAGGAGGCTCAAGCTGTCCCAGGCCCGGGTGTACTTTGAGGAAGCGCTGGGGGCCCTGGAGGGCAGCTTCGGGGACCTGTTCCTAGTGGTGGCTGTGTACGCCAACCTGGCCAGCATTTACCGGAAGCAGAAGAACCGGGAGAAGTGTGCACAGGTGGTGCCCAAAGCCATGGCCCTGCTCCTGGGGACGCCTGACCACATCTGCAGCACCGAGGCGGAGGGGGAGCTCCTGCAGCTGGCGCTGCGGCGGGCGGTGGGTGGCCAGAGCCTGCAGGCCGAGGCCCGGGCCTGCTTCCTGCTGGCCAGGCACCACG-TGCACCTCAAGCAGCCCGAGGAGGCCCTGCCCTTCCTAGAGCGGCTGCTGCTTTTGCACAGGGACTCGGGAGCCCCAGAGGCCGCGTGGCTCTCAGACTGCTACCTACTCCTGGCTGACATCTACAGCCGCAAGTGCCTGCCCCACCTGGTGCTGAGCTGTGTCAAGGTGGCCTCATTGCGGACACGGGGCTCGCTGGCCGGCTCGCTGAGGAGTGTGAACCTGGTGCTCCAGAACGCCCCCCAGCCCCACAGC---------------------CTCCCTGCCCAAACTTCCCACTACCTCAGGCAAGCGCTGGCCTCCCTGACCCCGGGCACAGGCCAGGCGCTGCGCGGCCCCCTCTACACCAGCTTGGCCCAGCTGTACAGCCACCATGGCTGCCACGGCCCGGCCATCACCTTCATGACGCAGGCAGTGGAAGCCAGTGCTATTGCCGGAGTCCGTGCCATCGTGGACCACCTGGTGGCCCTGGCCTGGCTGCACGTGCTTCATGGGCAGAGCCCGGTGGCCCTGGACATCCTGCAGTCTGTCCGGGATGCAGTGGTGGCCAGCGAGGACCAGGAGGGCGTGATTGCCAACATGGTGGCCGTGGCTCTGAAGAGGACGGGCCGGACGAGGCAGGCAGCTGAGAGCTACTACCGCGCCCTGCGGGTGGCTCGGGACCTGGGCCAGCAAA----GGAACCAGGCAGTGGGGCTGGCCAACTTCGGGGCCCTGTGCCTGCATGCGGGTGCCAGCAGGCTGGCCCAGCACTACCTCCTGGAGGCCGTGCGGCTGTTCTCGAGGCTGCCCCTTGGGGAGTGTGGCCGGGACTTCACCCACGTGCTCCTGCAGCTGGGCCATCTCTGCACCCGCCAGGGCCCGGCCCAGCAGGGCAAGGGCTACTACGAGTGGGCCCTTCTGGTCGCCGTGGAGATGGGCCACGTGGAGAGTGAGTGCCCCAGTT chr4 + 94230402 83805706 83805705 83807248 83805706 83805705 83807248 1543 CCTGAAGGACCTTGCTTCTACATATA---TCAAGATGATGGTCAAGAATCAGATGTCTTTGAGTCATTGTTACTCTTCTTAAATAACAAAGAGTATGAGAGTGATTTCAAAAACCTGTATGATTTCTCTTATACATTCATTAATAGCATGTTTTATGGCTTTTCAGAGGAAGACGAACTGCTCAGTTTTTTTAGTGTAGCAAGGGAATTAGCAAAGAAAGCAGGTATGTCGTGGGCACTAGCAAGGCTCTGCTTTCTTTTAGGCAGGCTGAGTGTTAAAAAAGTGAAGTTTTCTCAAGCTCGGGTTTATTTTGAGGAAGCACTGGGAGCAGTAACTGGAGGATTTACTGATTTGTACTTTGTAATTGCTCTTTACACAAATCTAACAGTCATCTACTTGACACAGAAGAACAAAGAAAAATGTTCTCATGTTTTTGACAAGGCTACATCTCTTCTCATGGGAATTCCCAACCACATTTGCAGTGCTGACCTGGAGTCAGATATTCTAAAGCATGCTCTGAAGAGGACGATTTTGAGCCAGAACAAACATGCAGAGGCTAGGGCATGTTTTTTACTGGCAAAACACTACACTGCA-CGCAAACAACATGAAGAGGCACTTCCCTTCCTAGAAAGGCTGCAACTGTTGTTTAACGACTTGGG---TTTACAGAACAACTTATCTAAAAACTGTTATTTCAATCTAGCAGAGTCCTACAATGAGAAGTGTTTGCCACACATTGTGTTAAGCTGCATAAAAGTCTCCTCTTCCCAGAACTCAAGTACTCTAATGGATTCTCTGAAAAGGATCGATTTAGTCATCAAAAATGCTCCCAAACTCTATGGCTTGAGAAAACTCAGGCAAATACTTCCATCCCAAATTGCACCTTATCTCACACAAGCACTTTCCTCTGCATTTACAAATGAACAGCAAGGACTATGCAGCACCATCTATCTTAGTTTAGCAAAACTGTACAGCCACCACAAACAGTATGGAAAAGCCATCATTTACATGATGAAAGCCCTGGACTCTGATACTTCTGCTAAGCCAGAGGAAACTATTAACTACTTGGTTTCACTTGCTTGGTTATACATTCTTTACAGGCAGTATGATGTGGCGGCAACCATTTTAAATGCCGTTGTGGACTCCTCGGGGAGCAATCCTCAACAGCTAGGTGTTGCTTATAACATGCTTGCTATTGCTTTGAAAAGAACAAACAATACCAAGAAAGCTGTTGAAAGCTGCTACAAAGCTCTGCGTCTTTCTGAAGA----AGCCAATATGACTCATAACCAAGCTATATCCCTGGCTAATTTTGGGATGCTCTGTCTGCATGCAGCAGCTGGTAAGCTGGCAGAGCATTATTATATCAAAGCAGTGAAGCTATTTGCCAAACTTCCAAGTATGGACTGTGGTCAAGAGTTTATCCAAACCCTCCTTCAGCTGGGACGTTACTATGTTAATAGAACTCAAAGAGAAAAAGGAAGGTTTTATTATGAATGGGCATTTTTAGTTGCAATGGAGATAAGTCATCTGGAAAGTAAGTGCTGGAGTT ..:..:.::..:.x.....:.x.:x.---:x.:..:..:x.xx.:..x:....x.:.:.x::x...:..:.:..x...:.:..::x.xxx.:...::..:x::::...x:x::......:...x.xx.x:xxx.:.xxx.x.::...:....:::::....:xxx..x..:..x..:...x:::.x:x::.x:xxxx:..xx...::x::..x........x..:x.x::xxx...x..:..x...........:..::.:..xx.....x.::x:.::.::x.x...:.x..:..:..:.....x..:...........:.....:..xx.::xx..x:.x..::xx..::...x.:.x..::.x...x.x...:.x..:..::.x:x...:...:x..x:.........x::..:..:...x.x..x..xx.xxx...:..:.::x.:..x...x....:.:x..::.......:.....::.:..xx:....xx:..xx.:..:x...xx..x...x:.x..:..:.xxxx:......:.xx:..x..x.....:x....x..:..::.:.....x.::...:..:-....-.x...:..:.x:..:.....x..x...........:x......x:..x...:x:.:x....:...---:::.x..:x.:xx.x::::xx.:....:..::.xxx:..:..x..xx:.....::x:x.....::....x...x.x...:.:.....::.x..:..xx....x.:x.:..xx:x::.:x.x..:::x.::..x....::..x:.x:.::.:..xx..x.:..:..:...x.:.:.:.::..---------------------..:..xx......:.x.x.x:..:....x:.....:..xx....:x::x::x.:::::x.x:x..:.x:..::..:..x..x....:x::..:..:..xx.:..............:::x::x:.:..xxx:.......::.x.....:.x.:..xx....xx.:::.:..x:...::::x:xx:x.xx.:::.x:..:..:....xx.x..x..:...:.::..:.x...:.::.....x::xxx.....xx:::x...::.:x.xx.:..:xx...:x.xx:..x.:x..::xxxx.x...xx:..:..x::.xx:......x.x..::.x...:....:..:..:::.x:x..x.:.x.:..x.:...:....:....x:x..:.....xx.xx..x::..----:....::.x:----:x.....:..x:.:xxx.....:..:..:...::x..x..:........:.xx..::.:.:......xx....:..::x:x.x:.:..x...x:...:..:x.x.::..x..xxx.:x...x.....:.::..x..:.:...x::x.....x........x.:.:x..:::::x::x:::x:.x::xxx.:x.:..x.:.xx:..:..:..:.....x:..:.:..:..x:.......::.:..:x....:...:.....:xx.... 26M3D560M1I4M1D65M3D181M21I404M4D10M4I267M 848/1517 55.9% 1543/94230402 0.0% 37/1517 2.4% -75578574 -18651828 +9450 chr4 + 190214555 8231960 8231959 8232161 202 TTTGTCTTCTGCCCAGGCCAGCTGCGGGCCGTCCAGCGGCTGTGCCACTTCTACAGCGCCGTCATGCCCAGCGAGGCCCAGTGTGTCATCTACCATGAGCTCCAGCTCTCCCTGGCCTGCAAGGTGGCCGACAAGGTGCTGGAGGGGCAGCTCCTGGAGACCATCAGCCAGCTCTACCTGTCCCTGGGCACCGAGCGGTGAG chr4 + 94230402 83807880 83807879 83808079 83807880 83807879 83808079 200 TCTGTTTCC--CCTAGGTCAACTTCAAGCAATTAAACTGCTGTGTCAGTTCTACAGTACAGTCGTTCCCAATGAGGCTCAGTGTGTCATCTACAATGAATATCAACTATCTTTAGCTAGAAAGATGTCCAATAAGGTTCTGGAGGGACAAATTTTGGAAACCATTAGTCAGCTCTATTTGTCTTTAGGAACAGAAAGGTAAG .:...:.:.--..:...:..:..x.::..x:.:x.:.x......:..x........::.x...:.x....::.....:...............x....::x:..:..x..::.:..:x.x...:..x..:.:.....x........:..:x.::....:.....:..:........::....::.:..x..x..:x...:.. 9M2D191M 139/200 69.5% 200/94230402 0.0% 2/200 1.0% -75575920 -18654482 +6321 chr4 + 190214555 8235427 8235426 8235557 131 TTTCAGGTGGCACAGAACGTGGCCCTGTACACAGGCGACCCCAACCTGGGGCTGGAGCTGTTTGAGGCGGCTGGAGACATCTTCTTCGACGGGGCCTGGGAGCGGGAGAAAGCTGTGTCCTTCTACCGGGT chr4 + 94230402 83811486 83811485 83811616 83811486 83811485 83811616 131 TTTCAGGTTGCTCAAGATGCTGCTTTATGCACAGGAGATCCAAACTTAGCAATGGAATTGTTTGAAGCTGCTGGAGACATATTTTTTAATGGTAAATGGGAAAAGGAGAAAGCAGTGCCTTTCTACAGGGT ........x..x..::.:.:x..::.:.:......x..:..x...:.:.x:x....::.......:..x...........x..:..::.:..x:xx.....:x:.........x...:.:......x.... 131M 92/131 70.2% 131/94230402 0.0% 0/131 0.0% -75576059 -18654343 +3091 chr4 + 190214555 8249290 8249289 8249384 95 ATATATATATATATATATATATATATATATATATACACACACACACACACACATACACACACACACACACACAGACACACAGGTAAATATGTACA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA-----------AGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------.x:x.x.x..x:...::::.......:..:. 53M11D31M 57/84 67.9% 84/94230402 0.0% 11/84 13.1% -14998432 -79231970 +3045 chr4 + 190214555 8249297 8249296 8249350 54 TATATATATATATATATATATATATATACACACACACACACACACATACACACA chr4 + 94230402 53944239 53944238 53944292 53944239 53944238 53944292 54 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACA ......:x...:.x.x..x..x.....:...................xx:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -45694942 -48535460 +3136 chr4 + 190214555 8249320 8249319 8249371 52 ATATACACACACACACACACACATACACACACACACACACACAGACACACAG chr4 + 94230402 46140856 46140855 46140907 46140856 46140855 46140907 52 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAG .....:.:........x.x.............::::.:.:......x:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -37891536 -56338866 +3034 chr4 + 190214555 8253097 8253096 8253160 64 CTTCCTCTCTCCTTCCTTCTTTCTGCCTCTCCTTCCCTCCTTCTTTCCCCTTTCCCTGCCTCTC chr4 + 94230402 53459266 53459265 53459329 53459266 53459265 53459329 64 CTCTTTCCCTTTGCCCTCCTTTCTGCCTCTCCCTCCCCCCTTTTTTTTTCTTGCAGAACCTTTC ..:::..:..::x:...:..............:....:....:...:::...x.xxx:...:.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -45206169 -49024233 +6860 chr4 + 190214555 8269877 8269876 8270368 492 GGCGCCCGGCGCCCGGCCCCGCAGCG--GCCTCGTTGTCCCCGC-------CGGCCCCCGCCCGG-------TCTCCCGCGCTGCCAC----------------CCGCCGCCGGCCCTGCCGCCATGCAGGCGCGAGCGCTGCTCCTGGCCGCGTTGGCCGCGCTGGCGCTGGCCCGGGAGCCCCCTGCGGCGCCGTG---TCCCGCGCGCTGCGACGTGTCGCGGTGTCC----CAGCCCCCGC-----TGCCCCGGCGGCTACGTGCCCGACCTCTGCAACTGCTGCCTGGTGTGCGCCGCCAGCGAGGGCGAGCC------CTGTGGCGGCCCTCTGGACTCGCCTTGCGGCGAGAGCCTGGAGTGCGTG--------------------------------CGCGGCCTATGCCGCTGCCGCTGGTCGC-------------------------------------ACGCCGTGTGTGGCACCGACGGGCACACCTATGCCAACGTGTGCGCGCTGCAGGCGGCCAGCCGCCGCGCGCTGCAGCTCTCCGGGACGCCCGTGCGCCAGCTGCAG-AAGGGCGCCTGCCCGTTGGGTAAGCGCTCGGGGG chr4 + 94230402 50637720 50637719 50638321 50637720 50637719 50638321 602 GGCTCCCGGCG---GGCACGGCGGGGCCGCCGCGTGGGCGGTGCGGAAGATCGGCCGCCTCCCGGGGCGGGGTTTTCCGCGCCGTGGCTTAAGTCGGCGCGGGACGGCCGGTCGCCGCGTCGCCATGCCCTCCTCGGTGCTG----TGGTTG--TTGGCGCTGCTGGCGCCCGCCGTGGTGGCGGTGACGGAGCTGGGGGGTTGCGGGCCGTGCGATgcggcgcggtgcccggcgctgccgccgcggggctgcccgctgggccgggTGCGGGACGCCTGCGGGTGCTGCTGGCAGTGCGGGCGCGGCGAAGCCGAGCCGCCTgcccccgccggcgctggcggcgggcgctgcgccgccgggcTGGAATGCGTGAAGAGCCGCAAGCGCCGCAAGGCGAAgggcggcccgggccccgccgccgcctccggccccgccgccccggTCGGCGTGTGCGTGTGCAAGAGCCGCTACCCGGTGTGCGGCAGCGACGGGCTCACCTACGGCAGCGGCTGCCAGCTCCGCGCCGCCAGCCTGCGCGCACAGAGCCGCGGCGAGCCCGCCATCAGCCAGC-GCAGCAAGGGAGCCTGCGAGCAAGGTGCGAGGTAGGGGG ...x.......---...x.x..:.x.--...x...x.x.xx:..-------.....x..x.....-------.:.:......:.:x:.----------------.x....x:x...x:.:........xxx.x:x:.:....----...::.--.....xx:........:x...xx..x.x.xx:x:...x..:.x.---.:x..x..xx.....:.:.x.......:..----.x...x....-----.....xxxx...::x....xx...x:....::x......:x.xx.....xxxx.:....:.x......------.:x:.x....x..xxx.:.xx..x:....x..xx:.x.....:......--------------------------------.x...x.:x:.....:...x.:..:.x.-------------------------------------..x.x.....:....x........x......:.x..:..xx...xx...x.:x..x.......xx.....:.x.x:x.x.xx..:.x.xx..:.xx......-....-.....x......xx.:x:...:x.x.x.x..... 11M3D12M2I16M7I14M7I16M16I38M4D6M2D44M3I30M4I10M5I68M6I49M32I28M37I102M1D4M1I34M 320/482 66.4% 602/94230402 0.0% 130/482 27.0% -42367843 -51862559 +13487 chr4 + 190214555 8269892 8269891 8270385 494 GCCCCGCAGCGGCCTCGTTGTCCCCGCCGGCCCCCGCCCGGTCTCCCGCGCTGCCACCCGCCGCCGGCCCTGCCGCCAT-GCAGGCGCGAGCGCTGCTCCT----------GGCCGCGTTGGCCGCGCTGGCGCTGGCCCGGGAGCCCCCTGCGGCGCC--GTGTCCCGCGCGCTGCGACGTGTCGCGGTGTCCCAGCCCCCGCTGCCCCGGCGGCTACGTGCCCGACCTCTGCAACTGCTGCCTGGTGTGCGCCGCCAGCGAGGGCGAGCCCTGTGGCGGCCCTCTGGACTCGCCTTGCGGCGAGAGCCTGGAGTGC-----------GTGCGCGGCCTATGCCG-------CTGCCGCTGGTCGCACGCC------GTGTGTGGCACCGACGGGCACACCTATGCCAACGTGTGCGCGCTGCAGGCGGCCAGCCGCCGCGCGCTGCAGCTCTCCGGGACGCCCGTGCGCCAGCTGCAGAAGGGCGCCTGCCCGTTGGGTAAGCGCTCG--GGGGCCAGGGAGGAAGTGAAG chr4 + 94230402 83843823 83843822 83844346 83843823 83843822 83844346 524 GCACCGCGACTGCACTTTTCCCCTTCCTTCCTCGCGCCC---CTCCCGCCGCTCTCCCCGCCGCCGAGGATGCGGCTGTCGCTGCTCAGCCCGCTGCTCCTCCTCTGTCTCAGCCGCAGCCGCGGCTCCGCCGAGCTCCCGGCAGCCC------GAGCCAAGTGCCCGACCCGCTGCGATGTCTCCAAGTGCCCCAGCCCCAGCTGCCCCAGCGGCTACGTCCCCGACCGCTGCAACTGCTGCCTCATCTGCGCCGCGGGAGAGGGGGACTCGTGCGGCCGCAAGGAAGACCCTCCCTGCGGGGACAGCCTCGACTGCCGCTACCCCATGGGCAAGCGCTTCGCCAAGGGGGTCTGCCAGTGCAAGCTCAGCGTCCAGGTGTGCGGCAGCGACGGCCGCACCTACGACAACATCTGCCAGCTGAAGGCTGTGAGCCGCAAGGCGCTGCAGCACGGTCTGCCCGCCGTGGCTCAGGTGCAGAAAGGAGCCTGCGAATCGGGTAGGAGCATGGTGGGGCCTGGGCGTGAGCAAGG ..x....::.x..x::x..x:..::x.:xx.:.x.....---.......xx:x.:x..........:xxx...x..::.-..x.x:xx.xx..........----------:.....:x:x..x..x.:.x..xxxx.....x.....------.x...--...:..x:.x........:..x..xx:...:.........x........:..........x.......x...............x:.x........x:.x.....x..x:.x..:...x..xxxxx:...:.x..:.....x..x.....x..x...-----------.x..:x.xx..x:...:-------.....:x..xxx..x.:x.------.....:....x......x.:......:.x....:.x...xx....x....x.:x......x:x..........x.xx:xx.x.xx.....xx:...x.......:..x......xx:.:.....:.x..x:.--......x...x.x:..::.:. 39M3D37M1I21M10I37M6D5M2I157M11I17M7I19M6I132M2I21M 330/485 68.0% 524/94230402 0.0% 48/485 9.9% -75573931 -18656471 +6757 chr4 + 190214555 8282401 8282400 8282538 138 TCTCACTGATGCACCTGGCCCTTCCCGCCAGCGCAGGTCTCCACCAGCTGAGCAGCCCGCGCTACAAGTTCAACTTCATTGCTGACGTGGTGGAGAAGATCGCACCAGCCGTGGTCCACATAGAGCTCTTCCTGAGGT chr4 + 94230402 83852393 83852392 83852530 83852393 83852392 83852530 138 TCTTACTAACATATCCAATTCTTTCTGCTAGTATAGGTCACCTACAGTCCAGCAGTCCAAGATACAAATTCAACTTCATAGCAGATGTGGTGGAAAAGATTGCACCTGCAGTTGTGCACATTGAACTTTTCCTCAGGT ...:...:.:::.:.:::::...:.:..:..:::.....x..xx...::x.....:..:x.x.....:...........x..x..:........:.....:.....x..x..x..x.....x..:..:.....x.... 138M 97/138 70.3% 138/94230402 0.0% 0/138 0.0% -75569992 -18660410 +13004 chr4 + 190214555 8286559 8286558 8286791 233 AGACACCCGCTGTTTGGCCGCAACGTGCCCCTGTCCAGCGGTTCTGGCTTCATCATGTCAGAGGCCGGCCTGATCATCACCAATGCCCACGTGGTGTCCAGCAACAGTGCTGCCCCGGGCAGGCAGCAGCTCAAGGTGCAGCTACAGAATGGGGACTCCTATGAGGCCACCATCAAAGACATCGACAAGAAGTCGGACATTGCCACCATCAAGATCCATCCCAAGGTGGGTGG chr4 + 94230402 83854826 83854825 83855058 83854826 83854825 83855058 233 AGGCACCCTCTGTTTGGTCGAAATGTCCCACTTTCCAGTGGATCTGGGTTTATTATGTCTGATTCTGGTTTAATTGTGACCAATGCACACGTGGTGTCAAGTACCAATGCTATATCAGGGAGACAACAGTTGAAAGTCCAGCTACAGAATGGAGATACATATGAAGCAACCATCAGAGACATTGACAAGAAATCTGACATTGCAACAATAAAGATCCACCCTAAGGTGAGTGG ..:.....x........:..x..:..x..x..x.....:..x.....x..:..:.....x..xx.:..::.:..::.x........x...........x..:.x..:....::x:.:..x..:..:...:.x..:..x..............:..:x.x.....:..x.......:......:........:..x........x..x..x........:..:......:.... 233M 177/233 76.0% 233/94230402 0.0% 0/233 0.0% -75568267 -18662135 +3051 chr4 + 190214555 8288903 8288902 8288977 75 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCCCTCTCTCTCTCTTTTTTTTTTTTTCAGGGT chr4 + 94230402 56436012 56436011 56436081 56436012 56436011 56436081 70 TTTTTTCCCCCCCCCCTTTTTT--TTTCTCCCCCCCACCCACCCCCCCCCTTT---TTTTTTTTTTTTCCTGGGT ..::....::..::....::..--..:..:..:...x:..x.....:.:..:.---............:.x.... 22M2D29M3D19M 51/70 72.9% 70/94230402 0.0% 5/70 7.1% -48147109 -46083293 +13401 chr4 + 190214555 8291344 8291343 8291584 241 CTGTGTCTTCTCCTTCTCTCTCCTAGAAAAAGCTCCCTGTGTTGTTGCTGGGTCACTCGGCCGACCTGCGGCCTGGGGAGTTTGTGGTGGCCATCGGCAGTCCCTTCGCCCTACAGAACACAGTGACAACGGGCATCGTCAGCACTGCCCAGCGGGAGGGCAGGGAGCTGGGCCTCCGGGACTCCGACATGGACTACATCCAGACGGATGCCATCATCAACGTGAGTCCCAGGGACAGGAG chr4 + 94230402 83856069 83856068 83856309 83856069 83856068 83856309 241 CTTTTTTTTCTTCTGTTTTATTTAAGAAAAAATTACCCGTATTGTTACTGGGGCACTCTGCTGATCTAAGACCAGGAGAATTTGTAGTGGCAATTGGAAGCCCATTTGCCCTACAGAACACTGTGACAACAGGTATTGTCAGCACTGCTCAGCGAGATGGCAAAGAACTTGGCTTGCGGGACTCGGATATGGATTACATTCAGACAGATGCTATTATCAATGTAAGTACTAGGTATGCGAG ..x.x.:....:..x:.:.x.::x.......::.x..:..:.....:.....x.....x..:..:..:x.:..x..:..:.....:.....x..:..x..:..x..:..............x........:..:..:...........:.....:..x....::..:..x...:.x........x..:.....:.....:.....:.....:..:.....:..:...x.:...x.::x... 241M 179/241 74.3% 241/94230402 0.0% 0/241 0.0% -75564725 -18665677 +7400 chr4 + 190214555 8294084 8294083 8294207 124 CAGGATGGCGAGGTCATTGGCATCAACACGCTCAAGGTCACGGCTGGCATCTCCTTTGCCATCCCCTCAGACCGCATCACACGGTTCCTCACAGAGTTCCAAGACAAGCAGATCAAAGGTAAAG chr4 + 94230402 83859615 83859614 83859738 83859615 83859614 83859738 124 CAGGATGGTGAAGTGATTGGAATTAACACCTTGAAGGTTACAGCTGGAATTTCCTTTGCTATTCCGTCGGACCGCATTACTCAGTTCCTCACAGAGTCGCTTGACAAACAAAATAAAGGTAAAG ........:..:..x.....x..:.....x:.x.....:..:.....x..:........:..:..x..:........:..x.:..............:x.xx.....:..:.x:.......... 124M 97/124 78.2% 124/94230402 0.0% 0/124 0.0% -75565531 -18664871 +5632 chr4 + 190214555 8304174 8304173 8304281 108 CTCTTTCCAGCCTGGTGGATGAGCTGAAGGCCAGCAACCCGGACTTCCCAGAGGTCAGCAGTGGAATTTATGTGCAAGAGGTTGCGCCGAATTCACCTTCTCAGAGGT chr4 + 94230402 83865040 83865039 83865147 83865040 83865039 83865147 108 CTTCTTTTAGCTTGGTGGAAGAATTGAAACACAATAATGCTGATTTTCCTGATGTCAGGAGTGGAATTTACGTACATGAAGTTGTTCCAAATTCACCTTCTCATAGGT ..::..::...:.......x..::....:xx..::..:x.x..:..:..x..x.....x...........:..:..x..:....:x..:..............x.... 108M 79/108 73.1% 108/94230402 0.0% 0/108 0.0% -75560866 -18669536 +9559 chr4 + 190214555 8305955 8305954 8306136 182 TCTCTCCTGTTGGCAGAGGCGGCATCCAAGATGGTGACATCATCGTCAAGGTCAACGGGCGTCCTCTAGTGGACTCGAGTGAGCTGCAGGAGGCCGTGCTGACCGAGTCTCCTCTCCTACTGGAGGTGCGGCGGGGGAACGACGACCTCCTCTTCAGCATCGCACCTGAGGTGGTCATGTGA chr4 + 94230402 83865589 83865588 83865770 83865589 83865588 83865770 182 TCTTCTTTCTTTGCAGAGGAGGTATCCAAGATGGAGATATCATCGTTAAAGTCAATGGGCGTCCTTTGATGACTTCCAGTGACCTTCAAGAGGCTGTGATGAACGAATCACCTCTACTACTTGAAGTTCGGAGAGGAAATGATGACTTACTATTTAACATTGAGCCTGAAATTGTCATGTAA ...::::.x..x.......x..:...........x..:........:..:.....:.........:.::..:x:..x.....x..x..:.....:...x...x...:..x.....x.....x..:..x...x.:..:..:..:...:.x..x..:.:...:.x:.....::.x.......:. 182M 133/182 73.1% 182/94230402 0.0% 0/182 0.0% -75559634 -18670768 +3209 chr4 + 190214555 8327470 8327469 8327539 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:...........::........x.xx.x...xx:.x.......:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -67705727 -26524675 +3099 chr4 + 190214555 8336269 8336268 8336344 76 ATTAGGCATGCACACGCACACACACACACACACACACACAAAAACAAAAAAAAAAACAAAAAACAATATCT-TTATG chr4 + 94230402 12801933 12801932 12802009 12801933 12801932 12802009 77 ATTGTACGTATACATGACCATACACACACACACACACAAAAAACTAAAATAAAATAATAACAGGAATATCCATTATG ...:x:.:.::...:.xx..:.................x....x:....x....x.xx..x.:x......:-..... 71M1I5M 55/76 72.4% 77/94230402 0.0% 1/76 1.3% -4465664 -89764738 +3034 chr4 + 190214555 8336277 8336276 8336330 54 TGCACACGCACACACACACACACACACACACAAAAACAAAAAAAAAAACAAAAA chr4 + 94230402 70425768 70425767 70425818 70425768 70425767 70425818 51 TGCACATGCACACACACGCACACACA---AAAAAAAAGAAAAAAAAAATTAGAA ......:..........:........---.x.....x:..........:x.:.. 26M3D25M 43/51 84.3% 51/94230402 0.0% 3/51 5.9% -62089491 -32140911 +3214 chr4 + 190214555 8336284 8336283 8336327 44 GCACACACACACACACACACACACAAAAACAAAAAAAAAAACAA chr4 + 94230402 70425769 70425768 70425812 70425769 70425768 70425812 44 GCACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAA .....::.........:............x...:.......x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -62089485 -32140917 +3343 chr4 + 190214555 8349632 8349631 8349725 94 AAATAGCGAGGCGTGGTGGCACACACCTATAGTTCCAGCTACTCGGGAGGCTGAGGTAGGAGAATCCCTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:::..x:.:::....::...:--.:..............:.::........x:xx.x...x.x........:..:..x:xx:..:..:.. 25M2D67M 60/92 65.2% 92/94230402 0.0% 2/92 2.2% -67683554 -26546848 +4848 chr4 + 190214555 8366962 8366961 8367128 167 TAGAGCTTCGATTTCAGACTTCCTATGACAGGTTTGTTCACAGAAAACTCTGGCCACCAGGATGCCCGCTCCAACACCTTGCTTTCCTGCAGGACAGCGCCCCAGAGGTTTTTGTAGAGCTGCAAACAACACGTACACAGCAAGTGAAGACAAAGAAATAAGAAGGA chr4 + 94230402 83918565 83918564 83918715 83918565 83918564 83918715 151 TACAGTCTTGAACTCAGCCTTCCTTTAACAGGTTTATTAATACAAAATTCTGCCCACCATGAAGGTCTGTTGAGAACTTTGTTGCCTTGAAGGATCTCAGCCCACAAATTTTTATATAACTGGaaaaaa----------------aaaaaaaaagaaaaaaaaaaGA ..x..::.:..x:....x......x.:........:..x.:.x....:....x......x..x.x:.xx.:x.:x..:...:.x:.:..x....:xx.:x....x.::.....:..x.:...x...x..----------------:..:.x.......x..:..:.. 129M16D22M 101/151 66.9% 151/94230402 0.0% 16/151 10.6% -75551603 -18678799 +3172 chr4 + 190214555 8367484 8367483 8367522 39 AAAACAAACAAACAACAACAACAATAACAAAAAAGCACA chr4 + 94230402 24125116 24125115 24125154 24125116 24125115 24125154 39 AAAACAAACAAACAACAACAACAACAAAAAAAAAACACA ........................:..x......:.... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -15757632 -78472770 +4054 chr4 + 190214555 8367857 8367856 8367934 78 AGGAGTTCACCTGTAGTTCTAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:..x...x........:.........::........x:xx.x.:.x.......:.....:..x..x:.....:.. 78M 58/78 74.4% 78/94230402 0.0% 0/78 0.0% -67665343 -26565059 +7289 chr4 + 190214555 8370902 8370901 8371093 192 CTTTACCTCGCCGTCGGCTCTGCCAATCGGTGAGTCCAGAACAAAGTCAGGAGGAGCGATCACGTCTACCAGGGCAACTGCATCGTCTTTCAGCTGTTGG---AAAACAAAGCCCAGACACTTGGCACCTCCCGGGAATTTCCATGGTGACCAAAGCATAACAGCCCCGTGTGTG----GTTGCCAGGACCCACTAGCA chr4 + 94230402 83906340 83906339 83906526 83906340 83906339 83906526 187 CTTTACCTCTCCATCAGGTCTGCCAGTGAGTGAGTTCACAATTAAGTCAGGAGGGGCAAAGACATC----------ACTGCATCATCTTCCAGCTCTTCGAAAAAAACAAAGAGCACATACTTGGCAGCACTT--TAATTTCTATGGTTACTGATGAATAACAGCACAGCTGGGGAACTGTTGCTACAACCCACTAGCA .........x..:..:.x.......:.x:......:..x..:x...........:..:.xx..:..----------........:....:.....x..x.---.........xx..x.:........x.x.::--x......:.....x..::.x.x........x.x.:xx.x.----.....:.x:........... 66M10D24M3I30M2D40M4I20M 136/180 75.6% 187/94230402 0.0% 19/180 10.6% -75535438 -18694964 +7234 chr4 + 190214555 8370904 8370903 8371056 153 TTACCTCGCCGTCGGCTCTGCCAATCGGTGAGTCCAGAACAAAGTCAGGAGGAGCGATCACGTCTACCAGGGCAACTGCATCGTCTTTCAGCTGTTGGAAAACAAAGCCCAGACACTTGGCACCTCCCGGGAATTTCCATGGTGACCAAAGCA chr4 + 94230402 83923223 83923222 83923375 83923223 83923222 83923375 153 TTACCTCCCCGCTAGCTTTACCAATGGGAGAGTTGAGAATGAAGTCAGGAGGAGCAAAGACATCAACAAGGGCAACTGCGTCATCTTTCAACTGTTTAAAAAGAAAAGACATACATTTGGCAACTTCTATGATTACCTGTGAAGTACAGAGCA .......x...:::...:.:.....x..x....:x....::..............:.xx..:..x..x...........:..:.......:.....x:....x...:xx..x...:......x..:.::x..x.x:.::..:x.xx..:.... 153M 109/153 71.2% 153/94230402 0.0% 0/153 0.0% -75552319 -18678083 +6690 chr4 + 190214555 8381447 8381446 8381630 184 TAAGAGCAAATAATACAAAAGGGAATTTTGAAAACAAATACTTACCTGGCATTTGTTCCTTGCTTCAAAGTCACTGCTTCCTGATCTTTTCTCTTGGTTTAATTTTTGATAAGTCTCTCGGAGCAGGTAGCAAACCAGCCACTTGTATGCTGCCAGGGCGACTTCGGAATGACAAACAGAAGGA chr4 + 94230402 83926700 83926699 83926875 83926700 83926699 83926875 176 TGAAAATAAGCAATTAAAATAGGAAAGCTGAA--TAAGCACT-ACCTGACAGTTGTTTTTTGCCTCAAAATCACTGTGCCCAGACTGCTTCTCCTTTCTCAGCTTTAGGTCACTTTCTCGGAGCAAGTAGCAAACCAGCCATTTATATGCTGCTAAAGGAACT-----GTGCAAAAGAGAAGAA .:.:.::..::...xx...x:....xx:....--:..::...-.....:..x.....::....:.....:......:x:..x..::x:.....:.xx:.:.::...x.:.x.x.:..........:...............:..:........:.::.x:...-----:..xx...x.....:. 32M2D8M1D120M5D16M 121/176 68.8% 176/94230402 0.0% 8/176 4.5% -75545253 -18685149 +5640 chr4 + 190214555 8389635 8389634 8389744 110 CCCAGCAAATAGTTGCTTGTCTGCTGCAGCAGGATGTTGTTGTCACCTTCGTATGTGCAGTTGGGATCGTTGTCATCTCTAAGGACACCCAACCGGTTCACTGCAACAAA chr4 + 94230402 83928252 83928251 83928361 83928252 83928251 83928361 110 CTCATTAAGTAGCTGCTGGTTTGCTGAAGCAGGACATTGTTATCTCCCTCATATGTGCAGTTTGGATCATTATCATTCCGGATTTCACCCAGGCGATTCACTTTAAAAAA .:..x:..:...:....x..:.....x.......::.....:..x..:..:...........x.....:..:....::.x:.xxx......:x..:......x:..x... 110M 80/110 72.7% 110/94230402 0.0% 0/110 0.0% -75538617 -18691785 +3030 chr4 + 190214555 8390997 8390996 8391075 79 GCATATGTATATGTATGTGTATATGTATATGTATGTGTATATGTATATGTATATGTATATGTATATGTATATGTATATG chr4 + 94230402 21109215 21109214 21109293 21109215 21109214 21109293 79 GCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATG ..:...x........:x:::....::x::....:x.:..::.:.:..:x:..::x.x.:.........:....x..... 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% -12718218 -81512184 +7392 chr4 + 190214555 8392311 8392310 8392458 148 CATGCGCTTCTCCAAAACCTACTGGCCAGATAGCCGTGTCCTCCACACGCCTCCCGGCATTCCTGAATTCCTTGCTGGGTGGTCCACGAGGCCAGGGGCTTGCTGGCCGATGCCAGGGCGTGGATCTCACGTCCAAGCTCTGCCTTTG chr4 + 94230402 83929062 83929061 83929209 83929062 83929061 83929209 148 CATGCAGTAGTCTGTGACTTACTGGCAAGGTAACCATGTCCTCCACAAGCTTCTCGACACTCCTGGGCTGCCTGCTGAGCAGTCCAAGAAGACAGGGGTTTACTGGCAGCAGATAAGGCATGAATCTCACGTCCCAAATCAGCCTTTG .....:x.xx..::x:..:.......x..:..:..:...........x..:..:..:..:.....:::.x.:.....:.::.....x..:.x......:..:.....x.xx.x:.:...:..:...........x.:x..x....... 148M 105/148 70.9% 148/94230402 0.0% 0/148 0.0% -75536751 -18693651 +5071 chr4 + 190214555 8394613 8394612 8394750 138 ACCTCACCTGTCTGGCGCTGCGGTCTCCCGATGCAAGTCCTCGCTGGAGCTCCACCAGGTCCAGGAAGAGCGACTTGGAGAAATGGTCTAAGGCGTAGACAGCTGCCAGATATGGAAGCAAGCGCCATTGCTAGAACA chr4 + 94230402 83931069 83931068 83931206 83931069 83931068 83931206 138 ATCTCACCTGTCTCTGACTCCTTTGCTTTGTCAATAAGCCTGCATAAAATTCCACGAAGTTCTCAAACAGTGATTTGGAGAAATAATCTAAGGCATATGCAGCAGCTAGATACGGAAGAAGACGCCATTGCTGGAATA .:...........xxx:..x.xx.x::::.x::xx.:x...xxx.::.::.....x.:..:.xx:..x..:..:..........::........:..x:....x..:.....:.....x.::..........:...:. 138M 89/138 64.5% 138/94230402 0.0% 0/138 0.0% -75536456 -18693946 +7250 chr4 + 190214555 8396934 8396933 8397122 189 TACCTGCATTGGATACTCAAGCACTGGTATTTCCTCCTCCTCTGTGGGTCCAAACTGACGCCGAGTGGCTGAGAAGCGAAGAGCGATGGCCACGGCCAGCTTTAGGTTAAGGATGGCCAGGCTCACGATGGAGACCCGGCCCGAGGACAGGCTCCCCAGGGACGCTCCAAAGCGCTGCCTGACGTCCTA chr4 + 94230402 83932537 83932536 83932725 83932537 83932536 83932725 189 TACCTGTGTTTGATATTCAATAACAGGTATTTCTTCTTCATCAGTCGGTCCAAACTGATGGCGAGTTGCTGAGAAGCGAATGGCTATCGATAAGGCAAGCTTTAAATTGGTCGCAGAAACTGCTGTGATCAGAATTCTGCCAGAGGACAAGGATCCAAGAGCTGCACTAAAACGCTCCTTAACATCCTA ......::..x....:....xx..x........:..:..x..x..x............:.x.....x.............x:..x..x.x:.x...x.......::..::xx:::.xx.xxx::::...x:::.::.x...x.......:.xx:..x..:.x:..x.:...:....x.:.:..:..... 189M 125/189 66.1% 189/94230402 0.0% 0/189 0.0% -75535603 -18694799 +3737 chr4 + 190214555 8399553 8399552 8399655 103 TACCTTAAAGGGGCTGACATAGGTGCCCTCGGGGGTGACGTCTCCCATCCGGTTCAGAAGGCTCTGGCGAGGAACTCTGACCTTGTGGAACATGGCGAAACTG chr4 + 94230402 83933110 83933109 83933212 83933110 83933109 83933212 103 TACCTTGAAAGAACTTGAGTATTTTCCTTCAGGTGAGACATCTCCAGTTATATTCAGTATGTTTTCTTTAGGTATCCTGACATTGTGGAACATGGCAAACCTG ......:..:.::..x:x:..xx.x..:..:..x.x...:.....x:.:xx:.....x.x.:.:.xx:x...x.::.....x..............:..x... 103M 67/103 65.0% 103/94230402 0.0% 0/103 0.0% -75533557 -18696845 +6401 chr4 + 190214555 8405949 8405948 8406052 104 ACTCACCCATTATCCAGACCGTTCTGCCCGAGTTTTTTTCCTATGTCGCCAACCATCACTCCAGGCATGGGAAGAAGGGTCTTCGGGTCCCGGATCTATACAAA chr4 + 94230402 83940926 83940925 83941029 83940926 83940925 83941029 104 ACTTACCCATTATCCAACCCATTCTGCCCAATTTTCTTTCCTATGTCACCAACCATCACACCTGGCATTGGTAGGAGAGTTTTCGTATCTCGAATCTGCATAGA ...:............:x..:........:.x...:...........:...........x..x.....x..x..:..:..:....x:..:..:....::.:.:. 104M 81/104 77.9% 104/94230402 0.0% 0/104 0.0% -75534977 -18695425 +8209 chr4 + 190214555 8410181 8410180 8410360 180 GCCCCCACTGAGGG------CCACCCCAGCGTCCTACCTGCACGATAAAGGGATGCAGCCCATGGCACTGGTCCCCTGGCACACACAGCTTAGCAAACACCACCGCGTGAGTGGCTGTCTTGCCCATGTTGCCAACCCAAAACTTGGCAGCTTCGAAATCAGGGGAATGTATGATGAATTCCTGCA chr4 + 94230402 83941673 83941672 83941858 83941673 83941672 83941858 186 GCCCCCACAGAAAGACAAAACCATATTTCTATCCTACCTGTACAATAAAGGAATGTAATCCTTGGCACTGCCCATCAGGAGTGTAGAGTTGGGCATACACAACTGCATGTGTGGCATGTTTCCCCATATTACCAACCCAGAACTTTGCAGCTTCGAAGTCAGGAGAATTGATGATAAATTCCTGTA ........x..::.------...:x::xx::.........:..:.......:...:.::..x........x:.x:.x..x::::.x..:.x:...x....x..:..:..x.....xxx:..x.....:..:........:.....x...........:.....:....xx.....:........:. 14M6I166M 128/180 71.1% 186/94230402 0.0% 6/180 3.3% -75531492 -18698910 +5363 chr4 + 190214555 8414286 8414285 8414422 137 ACCTACCTCAGTGGCAGGATCGTAGTGGGCAGTTGTGCGAATGGCCTTGGTATTACTGCCGTGGCTTAATTCGGTCAGAGCAAAACATCCAAAAATCTAAATGTCAAAGCACAAAATGATGGAAAGCAAGAAAAGTT chr4 + 94230402 83942474 83942473 83942607 83942474 83942473 83942607 134 ACTAACCTGAGTGTTACGATCAAACGTGGCAGTGGTCCGTATGCCTTTGGTATTAGTTCCATGGCTGAGTTCAGTAAGAGCAAAACATCCAAAAATCTAAATAAAGAGATATAA---GACATAATTCAAGACTAGTT ..:x....x....x:.x....:x.xxx......x..x..x...x.:.........x.x..:.....x.:...:..x..........................:xx:.:::.:..---..::x..xx.....xx.... 114M3D20M 96/134 71.6% 134/94230402 0.0% 3/134 2.2% -75528188 -18702214 +3008 chr4 + 190214555 8418833 8418832 8418900 68 TGGGCAACAAGAATGAAACTCGGTCTCAAAGAAAACAAAACAAACAAACAACAACAACAACAAAAACA chr4 + 94230402 91541686 91541685 91541752 91541686 91541685 91541752 67 TGAGTGGTAGGAAGAAAAAACA-TTTAAAACAAAAAACAACAAACAAACAACAACAACAACAAAATCA ..:.::::.:...x:...xx.:-.:.x...x....x.x...........................x.. 22M1D45M 50/67 74.6% 67/94230402 0.0% 1/67 1.5% -83122853 -11107549 +3945 chr4 + 190214555 8418841 8418840 8418926 86 AAGAATGAAACTCGGTCTCAAAGAAAACAAAACAAACAAACAACAACAACAACAAAAACACAGAAAAATATG-GTCAA-CATCATTAG chr4 + 94230402 43491319 43491318 43491399 43491319 43491318 43491399 81 AAGAACAAAATTT-------AAACAAACAAAACCAACAAACAACAACAACAACAAACAAATAGAAAAATATGTGCCAAGCACCACTAG .....::...:.:-------..:x.........x......................x.x.:...........-.:...-..:..:... 13M7D52M1I5M1I9M 66/79 83.5% 81/94230402 0.0% 9/79 11.4% -35072478 -59157924 +3021 chr4 + 190214555 8418863 8418862 8418898 36 GAAAACAAAACAAACAAACAACAACAACAACAAAAA chr4 + 94230402 23069459 23069458 23069494 23069459 23069458 23069494 36 GAAAACAAAACAAACAAACAACAGCAACAAAAAAAA .......................:......x..... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -14650596 -79579806 +3180 chr4 + 190214555 8418869 8418868 8418908 40 AAAACAAACAAACAACAACAACAACAAAAACACAGAAAAA chr4 + 94230402 22215900 22215899 22215939 22215900 22215899 22215939 40 AAAACAAACAAACAACAACAACAACAAAAAAACAGTAAGA ..............................x....x..:. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -13797031 -80433371 +3379 chr4 + 190214555 8430716 8430715 8430798 83 CATGGTGGCGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCCTGAACGCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x:..--....:.:...........::........x.xx.x...x.:.:.....x...:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -67602481 -26627921 +6107 chr4 + 190214555 8440859 8440858 8441067 209 GGCGCGCTTCTCCCACAGGGCTTCTGGGCTGCGGTCGAAGTGTGGCTGGAGAGGCCGCAGGTGGCAAACAAACGGCTTTGCGGCGCCCGCCTGGAGGCCCGCTGGAGCGCCGCCCTGCCCTGCGCGGA---------GGCCCGCGGCCCCGGGACTAGCGCAGGCTCGGAGCAGAAGGAGCGGGGTCCGGGACCCGGCCAGGGTTCCCCCGGAGGGGG chr4 + 94230402 83953313 83953312 83953513 83953313 83953312 83953513 201 GGCGAGGTGCTGCCCCGCGGCTTCTGGGCGGCGGTGCGCGTGTGGCTGGAGAAGCCGCAGGTGGCCAACAGGCGGCTGTGCGGCGCCGCCATCGAGGC---GGAGGGCACGGTGCTGCCCGGGGAGGACGGAGATGCGTCTCCCCACCTCGGGAGCGGC---------GAGGAGTCGGCGGGGGCTGCGGAGCTGGGCCGG-----CTCTGGAGGGAG ....x.x.x..x..x.:x...........x.....xx:x.............:............x....::.....x.........xx.x.x.....---xx:.:..:.x.:x......x.x.x...---------.x.:.x.x:..:.....x::..---------...x..xx..x.x...x.x...::.:x....:.-----.:.:......:. 98M3D27M9I22M9D33M5D12M 136/192 70.8% 201/94230402 0.0% 26/192 13.5% -75512454 -18717948 +13242 chr4 + 190214555 8449651 8449650 8449995 345 TTTCTCTTATTTTTAAAGGTTCATATCTGTTTTAATTTTCTGTCCAGAAAGATGGCATTCAGATGGAATCGTGTATCCCAAACCCACGTGGCTTGGAGAAGAGTTGCTGGCCAAGTTGGCCAAGTGGTCTGTAGAGAACAAGAAGAGTGACTTTAAAAGCACCCTTTCCCTCATCTCCATTATGAAGTATAGCAAGGCTTACCAGGAACTTAAAGAGAAGTATAAGGAAATGGTTAAGGTAATTCTGGTGGAGAATAT-CTGATTTTTCCCCCTTCATGATTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGCGACAGTCTTGTTCTGTCAC chr4 + 94230402 83955866 83955865 83956194 83955866 83955865 83956194 329 TTTATTTTATTTTTTAAGGTCTGTGTCTATTATAGCTCCATCTTCAGAAGATTGGTTTTCAGATGGAATAACATACCCCAAACTGTCATGGCTTGGAGATGTACTTTTGTCCAAACTGGCTAAGTGGTCTGTGGAGCAAAAGTGCAGTGAGTTCAGAAGTACGCTGTCACTCATTCCTGTAGCAAAATACAGCAAGATTTATCAAGACCTTAAAGAAAAATACAAGGAAATGGTAAAGGTAAGTTAGGTGACAAATGTGGTGA-----CCTCATTC----------TTTCTCATCATTACTTTTTATTCTTGTTTTTTTTGTCTTATGAAA--CTGTTTCTGTCAC ...x.:........x.....:::.:...:..x..::.::x.x.:.....::x...:x............x:::..:.......:xx.:...........x.x::.x:..x....::....:...........:...x.x...x:x.....x..:.:...:..x..x..x.....::.::.x:::..:..:......::...:..:..x........:..:..:...........x.......x.:x....:x:...:.-x...-----..:.x...----------.....:x..x..x......x..:..x........x.:..::..x.--..xx......... 258M1I4M5D8M10D45M2D13M 232/328 70.7% 329/94230402 0.0% 18/328 5.5% -75506215 -18724187 +5321 chr4 + 190214555 8451932 8451931 8452034 103 TTTATGTTTGCTCTTGAAACTGTTTTAGGTGTGGCCTGAAGTCACTGATCCTGAGAAGTTCGTGTATGAAGATGTGGCTATCGCAGCATACCTGCTGGTAAGG chr4 + 94230402 83957114 83957113 83957206 83957114 83957113 83957206 93 TTTATTTTTCCTCTGAA----------GGTATGGCCTGAAGTGACAGATCCTGAGAAGTTTGTTTATGAAGATGTTGCCATTGCCACTTACTTGCTGGTAAGG .....x...x....x:.----------...:...........x..x..............:..x...........x..:..:..x:.x...:........... 17M10D76M 77/93 82.8% 93/94230402 0.0% 10/93 10.8% -75505182 -18725220 +6811 chr4 + 190214555 8452861 8452860 8452993 133 TTTGTTTTTCTCTTCACTTAGATTCTATGGGAAGAAGAAAGGGCTGAGAGGAGACTAACTGCCAGGCAGTCCTTTGTGGACCTGGGATGTGGAAATGGCCTCCTGGTCCACATCCTGAGCAGTGAGGGGGTAA chr4 + 94230402 83958770 83958769 83958902 83958770 83958769 83958902 133 TCTTTTATTTTCTCATCTTAGGTTCTCTGGGAAGAAGAGAGAAAGGAAAAAGGATTGGCCAACAAACAGTCGTTTGTAGATCTTGGATGTGGAAATGGCCTACTGGTTCATATTCTTAGCAACGAAGGGGTAA .:.x..x..:...:xx.....:....x...........:..::xx..:.:::..:.::.::x..::.....x.....:..:..x.................x.....:..:..:..x....::..:....... 133M 95/133 71.4% 133/94230402 0.0% 0/133 0.0% -75505909 -18724493 +5508 chr4 + 190214555 8454736 8454735 8454816 81 TTTCAGCATCCAGGCAGAGGGATTGATGTCCGAAGAAGAAAAATCTGGGACATGTATGGACCACAAACTCAGTTAGAGGTA chr4 + 94230402 83959895 83959894 83959975 83959895 83959894 83959975 81 TTTCAGCACTTAGGTCGAGGAATTGACGTGAGGAGAAGAAAAATATGGGACATGTATGGACCAGAAACTCATTTAGAGGTA ........:::...:x....:.....:..xx.:...........x..................x.......x......... 81M 68/81 84.0% 81/94230402 0.0% 0/81 0.0% -75505159 -18725243 +3120 chr4 + 190214555 8458427 8458426 8458486 60 AGTAAATTTTCTCTTTCTTATGATTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGAC chr4 + 94230402 69288034 69288033 69288093 69288034 69288033 69288093 60 AATAAATTTTCTTTTCACAATGATTTTTGTCCCTTATCTTTTTTTTTTTTTTCCTAGTAC .:..........:..:x:x........:x.::...x................::.::x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -60829607 -33400795 +3168 chr4 + 190214555 8459061 8459060 8459144 84 ACATGGTGGCATGCACCTGTAGTCCCAGCTACGCGGGAGGCTGAGGTTGGGGGATCACCTGAGTTTGGGAGGTTGAGACTGCGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--.....x......:........x:.::........x::x.x.:.x...:...:::::.:..x..x:.:...::. 9M2D73M 54/82 65.9% 82/94230402 0.0% 2/82 2.4% -67574135 -26656267 +3064 chr4 + 190214555 8462699 8462698 8462751 53 GTCTCAAAAACAACAACAACAAAACAAAACAAAACAAAAAAACTTCATAAAAC chr4 + 94230402 57188490 57188489 57188542 57188490 57188489 57188542 53 GCCTTTAAAAAAGCAACAGCAAAACAAAAACAAACAAACAAACTCCAGAAAAC .:..:x....x.:.....:..........xx.......x.....:..x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -48725791 -45504611 +5616 chr4 + 190214555 8463968 8463967 8464093 126 TTTTGTTATTCCTTTAGGAAGATGCAATCACACCCAATGATAAGACCCTTTTCCCTGATGTTGATTGGTTAATCGGTAACCATTCTGATGAACTCACACCATGGATACCTGTCATTGCAGCCAGGT chr4 + 94230402 83962323 83962322 83962448 83962323 83962322 83962448 126 TTTTTTTTTTTTTAAAGGAATCTTCTATCGTGCCAGGTGACAGCCATCTCTTTCCAGATACTGACTGGCTGATAGGAAACCATTCAGATGAATTAACACCATGGATACCTGTAATTGCTGCCAGGT ....x..x..::.xx.....xx.x.x...:::..x::...:.:xxx:..:..:..x...::...:...:.:..x..x........x......:.x.................x.....x....... 126M 89/126 70.6% 126/94230402 0.0% 0/126 0.0% -75498355 -18732047 +10770 chr4 + 190214555 8465365 8465364 8465573 209 GTTCTTTTTGAAGGTCTTCCTACAATTGCCGCTTCTTTGTCCTCCCCTGCTGCTTCTTTGACTTCATTGGAAGATACTCCCGGAGGCAGAGTAAGAAGACTCAGTACCGGGAATACCTTGACTTCATTAAAGAAGTGGGCTTCACCTGTGGGTTTCACGTGGACGAAGACTGCCTCAGGATTCCTTCAACCAAAAGAGT-ATGTCTGATT chr4 + 94230402 83962991 83962990 83963200 83962991 83962990 83963200 210 GTCCTTCTTGTAGGTCTTCCTATTCATGTAGGTACTTTGTGCTGCCATGTTGCTTCTTTGATTTCCATGGAAAATACAGCCGAAGACAAAGCAAGAAGACTCAGTACAGAGAATATCTTGATTTTGTTGCTGAAGTGGGATGTGTATGTGGTTTTAATGTGGAAGAAGACTGCCTTAGAATTCCATCAACAAAAAGGGTAATGTTTGACT ..:...:...x...........:xxx..:x.x.x......x..x..x..:...........:...xx.....:....xx...:..:..:..:...............x.:.....:.....:..::..:xx........x.x:::x.....x...x.:.....x...........:..:.....x.....x.....:..-....:...:. 199M1I10M 158/209 75.6% 210/94230402 0.0% 1/209 0.5% -75497626 -18732776 +7030 chr4 + 190214555 8467899 8467898 8468354 456 TTTCTTCAAACGCAGGTCTGTCTCGTTGGAAAATCCAGAACATACCCTTCCTCCAGAGAAGCTTCCGTGGATGAAAAGAGGACTCAGTACATTAAGAGCAGGCGGGGCTGCCCTGTAAGCCCACCTGGCTGGGAGCTTTCCCCTTCTCCACGCTGGGTT-GCTGCTGGCAGT---GCTGGTCACTGTGACGGTCAGCAAGCTCTGGACGCCAGGGTCGGGTGTGTAACCAGGGCCTGGGCCGCTGAGCATGGAGCAGGGCCCCAGGCTGAAGGACCCTGGCTACCTGGATTTCATCCCAGAGAAAAGGCTGAGCGTGTGAGGAACTGTGCCGCCCTGCCACGAGATTTTATTGACCAAGTGGTTTTGCAAGTAGCGAATTTACTGTTAGGTGGAAAGCAATTAAACACAAG---AAGTTCTCGAAATGGGAGTTTGAAGACCTGGAATGGGGGAGGTAAGCTG chr4 + 94230402 83963662 83963661 83964072 83963662 83963661 83964072 411 TTTCTGCTAAGATAGGTGTGCCTTATTGGAAAAAACAGGACCTATCCACCTATGGAACGTTCTTTGATTGATGAGCAGATAACACAGTTTATTCATAATCGCCAGACCTGTGCTGTGGTTGCACGTGACAGAGAA----------------GATGGATTTAATCATAACAGTCACTCTGATTTGTGCAAAGG--AGTAAGCTCAGAACTTC-------------------------------CTGAAAATATGATGGAGAT---GGCTAGTGGAATTTGGATGCCTGGATTTCAACCCAGAGAAAAAGTAGAACAAACAAGAAATTGTGCTGCCCTCCCTCGGGATTTTGTAGATGGTGTCGTTCTGAATGTGGCAAACTTGCTGTTAAATGCAGTCCCTGCAAAATCATGTTCTAATAGTCATGGTGGAAATGAGGATACCTGGAATCCAGGAGGTGAGATG .....x.x..x::....x..:..::........xx...:..x..:..x:.:x:x::.x:xx...:x:.x.....:x...x:..x....x:...x.x.::x.x.:.:x...:x....::x:x...x..:.x.:..:----------------.x...:..-:x.xx.::....---x...:.:xx..::.x..--..:......x.:..x:.-------------------------------....:x..:x::::.:.x:---....::x...x::...x.:...........x...........:.:x..:.:x:::..:..:.....:.....x..x..:......:.x..:x:x..x...:..x.x..:..:..:..:......::..x.:xx.xxx:...xx..x.---x.:.xx..:x::...:.:.xx.:.x.........xx:......:..x.. 135M16D8M1I12M3I17M2D17M31D19M3D147M3I49M 244/404 60.4% 411/94230402 0.0% 59/404 14.6% -75495763 -18734639 +9850 chr4 + 190214555 8475750 8475749 8475991 242 TCTTCTCTGTTCCAAACCACAGTTGTGAATGGGAGAGTTCACATCCGCGACTGGCGAGAGGAGACACTGTGGAAGACAAAGCAACCGGAAGCGAAACAGAGACTGCTCTCTGAAGCCTGCAAAACCCGCCTCTGCTGGTTCTTCATGCATCACCCTGATGGCTGCGCTCTGTCCACGGACTGCTGCCCGTTTGCCCATGGGCCTGCGGAGCTGCGGCCACCCCGGACCACCCCGAGGAAGAA chr4 + 94230402 83965782 83965781 83966023 83965782 83965781 83966023 242 TTTTGTTTGTTTTTAATCTTAGTTCTGGATGGGAGAGTTCATATTCGTGACTGGAGAAAAGAGAAACCATCAAGGAAAACGAAGCCTGAAGTAAAAAGATGCCTTTCAGCTGAAGCGTTTAAAACACGTCTCTGTTGGTTCTTCATTCATCATCCTGACGGTTGTTCTTTGCCTTCTGAGTCTTGTCCATATGCTCATGGGCCTGAGGAGCTAAGACAGTCTGAGACTATTAAAAAGAAAAA .:..x.:....::x..:.x:....x..:.............:..:..:......x..:.:....x..::.x:.:..x..x.x.:..x....::...x::x.x..x::xx.......x.x:.....x..:.....:...........x.....:.....:..:..:x..:..:.:x.x..x.x:..:..:.x...:..........x......:x.:.x::.:x:...:.::xx:.:...:.. 242M 160/242 66.1% 242/94230402 0.0% 0/242 0.0% -75490032 -18740370 +3268 chr4 + 190214555 8512001 8512000 8512069 69 CATATGTTGAATTTTCTTTTTAGTTTTTAGTTTTCTTTTGTTGTTGTTGTTGTTTTCCCATTTTTTAAA chr4 + 94230402 81178882 81178881 81178950 81178882 81178881 81178950 69 CACATTTTGTGTTTTCACTCAGGTTTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAA ..:..x...x:.....x:.:x:.....xx...x.:....................x::::......x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -72666881 -21563521 +3188 chr4 + 190214555 8521559 8521558 8521632 74 GTGCACCTGTGATCCCAGCTACTCAGGAGGCTGAGACAGGATAATCGCTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...::.:.........::::........x.xx.xx..x.:......:....:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -67511645 -26718757 +3126 chr4 + 190214555 8531166 8531165 8531235 70 CATGGTGGTGTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGATGGGAGAATTGCTTGAACCTGGTAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......::..--....:.:...........::........x:xx.x...x::........::.x.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -67502031 -26728371 +3471 chr4 + 190214555 8555516 8555515 8555598 83 CGTGGTGGTGCACACCAGTACTCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCACTTGAACCTGGGAGGCTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........::--...x.:...........::........xxxx.x...x..........::.:..x:.x:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -67477681 -26752721 +3286 chr4 + 190214555 8555653 8555652 8555717 65 CTCAAAACAAAAACAAAAACAAACAACAACAACAACAAAAAAAAAACCACAGACACACACAAAGT chr4 + 94230402 23689327 23689326 23689390 23689327 23689326 23689390 64 CTCTAGATAAGAA-AAAAAGAAACAACAACAACAACAAAAAACAACCAACAAACAGATTCAAAAT ...x.:.:..:..-.....x......................x..x.x...:...x.:x....:. 13M1D51M 51/64 79.7% 64/94230402 0.0% 1/64 1.6% -15133674 -79096728 +3093 chr4 + 190214555 8555657 8555656 8555702 46 AAACAAAAACAAAAACAAACAACAACAACAACAAAAAAAAAACCAC chr4 + 94230402 4563811 4563810 4563856 4563811 4563810 4563856 46 AAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAAC ...x.....x...x.......:...................x.x.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 3991846 NA +20812 chr4 + 190214555 8580748 8580747 8581653 906 CTCCAGGGCGGCCCCGGGCTGCTCCTGCTCCGC-AGAGCTACGCCCTCCCCCCGGGTGCCCCGGACCCTGC------ACTTGCCGCCGCTTTCCTCGCGCTGCTCTGGACCTTGCTA-------------GCCGGCTCTGCACCTCCCAGAAGCCGTGGGCGCGCCGCT--------CAGCTGCTCCATCGCCTCA--------CTTTCCCAGGCTCGCGCCCGAAGCAGAGCCATGAGAACCCCAGGGTGCCTGGCGAGCCGCTAGCGCCATGGGCCCCGGCGAGGCGCTGCTGGCGGGTCTCCTGGTGATGGTACTGGCCGTGGCGCTGCTATCCAACGCACTGGTGCTGCTTTGTTGCGCCTACAGCGCTGAGCTCCGCACTCGAGCCTCAGGCGTCCTCCTGGTGAATCTGTCTCTGGGCCACCTGCTGCTGGCGGCGCTGGACATGCCCTTCACGCTGCTCGGTGTGATGCGCGGGCGGACACCGTCGGCGCCCGGCGCATGCCAAGTCATTGGCTTCCTGGACACCTTCCTGGCGTCCAACGCGGCGCTGAGCGTGGCGGCGCTGAGCGCAGACCAGTGGCTGGCAGTGGGCTTCCCACTGCGCTACGCCGGACGCCTGCGACCGCGCTATGCCGGCCTGCTGCTGGGCTGTGCCTGGGGACAGTCGCTGGCCTTCTCAGGCGCTGCACTTG-GCTGCTCGTGGCTTGGCTACAGCAGCGCCTTCGCGTCCTGTTCGCTGCGCCTGCCGCCCGAGCCTGAGCGTCCGCGCTTCGCAGCCTTCACCGCCACGCTCCATGCCGTGGGCTTCGTGCTGCCGCTGGCGGTGCTCTGCCTCACCTCGCTCCAGGTGCACCGGGTGGCACGCAGACACTGCCAGCGCATGGACACCGTCACCATGAAGGCGCTCGCGCTGCTCGCCGACCTGCACCCCAGGTA chr4 + 94230402 84128987 84128986 84129900 84128987 84128986 84129900 914 CTCCTTGGCAGCTCTTCCCCGCTCTTCCTCGGCCAGATCTCAGCCCGCACCCCTGGctcctctctccccactcgtctcctcgccgaccctctcctcgcaccccgctgcccccggctcctctctccgctcctccggctcctctccccCGGCAA--CATGCGCGGGCGGCTGCGGGCGGTGGCTGCGGTGCCGGCTCGGATGTCCCCTTCCTCCTGCCTTCGCCC-----------------ACTCCAGG--------CGACCCGCTAA-GAGATGGACTTGGCAGGCGTGTTGCTGGCGTTGCTCCTCGTGTTGGTGCTGGTCGTCTCTCTGCTCTCCAACCTCCTGGTGCTGCTATGCTTCGTCTACAGTACGGAGATCCGCAAGCAGGTCGCCGGGGTTTTCCTGGTGAACTTATCCTTCTGCAACCTGCTCCTTACCATCCTGAACATGCCTTTCACCCTGCTGGGAATCCTGAGGAACCAGCAACCCCTCGGGGGCTGCATCTGCAAGGCAGTGGGTTTCCTGGAAACTTTCCTGACTTCCAACACGATGCTGAGCATGGCAGCACTCAGCATCGACAAGTGGATTGCTGTGGTGTTCCCCTTGAGCTACACCAGCAAGATGAGGTATAAGGACGCTGTGATACTGATGGGCTACTCGTGGCTCCACTCCCTCACCTT-TCCCTTGGTGTCCTTGTTTTACTCGTGGGTAGATTACAACAGCGTTTATGCCTCTTGCACCTTGCACCTGAAGGAAGAGACAGAGCGAAGAAGGTTTACAGTGTTCACAATCGTCTTTCACTCCACCAGTTTCATGCTGTCTCTGGTGATCTTGTGTTTCACCTATTTAAAGGTGTTGAAAGTTGCCCGGTTCCACTGCAAGCGGATAGACATTATAACCATGCAGACTCTGGTTTTGCTGGTGGATATCCACCCCAGGTA ....xx...:..:.:xxx.:....:.x...x..-...x..xx....x.x....x..:x..:.xxx...::.------x..:....x.x..:.......:.:x.x...xx..:x...x-------------x.......:x.x..:..x:x..--.:..x...x..x...--------::.....xx:::..x...:--------...:.:.xx..::x.....-----------------..:.....--------...x......:-.xx....:.::x.xx.:x.:.:........xxx.....x...x....:....:...xx.x.....x......x:x...........x..:.x..:......::.x...x......xx.::.:.x.x..x..::..........::.:..::.xx..x.......x..x:.x::x...:.......:.....x.....x..x:.xx..x.x::x.:.xx...x::x.x.xx.x..::x...x.:.:x:.x..:........x..:......:.x......:..::.......:....:..:..x...::x...x.....x.x..x....xx.....x:..x.....:..:.xx:xx..x.::xxx:xx.:..:.xxx.:...x......::x.x...xxx..x..x..x:....-..xxx:.x..:x....-x:.:.......x.x.::....:.....::.x:..x..:..:x.x:...:....xx.xxx...x.x.....xxx:x.x..::...:x.....x::.::x:.:..:x..::x:.:...:.....:.x....:.:.x:.x..::......xx:.xx.....:xxx::..x..x..xxxx......x....x..:....:::.x......x..:.x..x.:x:....x.:x..:x.x........... 33M1I37M6I40M13I22M2D15M8I19M8I19M17D8M8D11M1D413M1D16M1I244M 551/877 62.8% 914/94230402 0.0% 66/877 7.5% -75548239 -18682163 +7477 chr4 + 190214555 8587049 8587048 8587254 206 AACAGGCTGGCGGAGCTCGTGCCCTTCGTCACCGTGAACGCCCAGTGGGGCATCCTCAGCAAGTGCCTGACCTACAGCAAGGCGGTGGCCGACCCGTTCACGTACTCTCTGCTCCGCCGGCCGTTCCGCCAAGTCCTGGCCGGCATGGTGCACCGGCTGCTGAAGAGAACCCCGCGCCCAGCATCCACCCATGACAGCTCTCTGGA chr4 + 94230402 84134078 84134077 84134283 84134078 84134077 84134283 206 AACAGGTTGATAGAGCTCCTTCCTTTTGTTACCATAAACTACTACTGGGGAATTATAAGCAAGTGCCTCACCTACAGTAAGGCTGCGTCAGATCCATTTGTTTACTCACTTTTACGTCAACAGTACAAAAAAGTTCTGATCAACATCGTAAATAGGATACTTAAAAGGGATCTGTATCCATCATCAGGGTACAACAGCTCTCTTGA ......:..:::......x.x..:..:..:...:.:...xx.:.x.....x..:x.x...........x........:.....x.:.x.x..:..:..:::x.....x..x:.x..:.::.x..x.x:xx....:...::.::...x..:x.:x..x.:..x..:..::x:.:.:::...x....x:xx:.::..........x.. 206M 131/206 63.6% 206/94230402 0.0% 0/206 0.0% -75547029 -18683373 +3781 chr4 + 190214555 8587257 8587256 8587443 187 TGGCCGGCATGGTGCACCAGCTGCTGAAGAGAACCCCGCGCCCAGCGTCCACCCACAACGGCTCTGTGGACACAGAGAATGATTCCTGCCTGCAGCAGACACACTGAGGGCCTGGCAGGGCTCATCGCCCCCACCTTCTAAGAAGCCCTGTGGAAAGGGCACTGGCCCTGCCACAGAGATGCCACTG chr4 + 94230402 84134214 84134213 84134384 84134214 84134213 84134384 171 TGATCAACATCGTAAATAGGATACTTAAAAGGGATCTGTATCCATCATCAGGGTACAACAGCTCTCTTGACACCGAAAATGATTACTGCTTGCACAGAACAAACTAACAACATGACAA--------GCACTCCCCTTCAAGCGAGACAGGTG--------ATTGCCACTGCTGGAAAGCTGCCTTTG ..::.::...x..:x.:x:.x.:..x..:..::x:.:.:::...x.:..x:xx:.....:.....x.x.....x..:.......x....:....xx::...x...:.x::.x..:..:--------..x.:.x.....x.:x:..x.xx...--------.:..x.x....::x.:..x....x:.. 118M8D26M8D27M 103/171 60.2% 171/94230402 0.0% 16/171 9.4% -75546957 -18683445 +13850 chr4 + 190214555 8601109 8601108 8601506 398 CCCTGCCTCCCCAGCCACCTGCGTGGACCTGCAGCTCAGGACCTGCAGCGATGCCGCCTACAACCACACCACCTTCCCCAACCTGCTTCAGCACCGGTCGTGGGAGGTGGTGGAGGCCAGCTCCGAGTACATCCTGCTGAGCGTTCTACACCAGCTCCTGGAAGGCCAGTGCAACCCGGACCTGCGGCTGCTGGGCTGTGCTGTGCTGGCCCCCCGGTGTGAGGGCGGCTGGGTGCGCAGACCCTGCCGGCACATCTGCGAGGGCCTGCGGGAGGTCTGCCAGCCCGCCTTCGACGCCATTGACATGGCCTGGCCCTACTTCCTTGACTGCCACCGCTACTTCACGAGAGAGGACGAGGGCTGCTATGACCCGCTGGAGAAGCTTCGGGGTAAGGGAA chr4 + 94230402 84163346 84163345 84163743 84163346 84163345 84163743 398 CCTTTTTTTCATAGCAAAATGCGTGGACATCTCCTTAAGCTCTTGTACAGATGTTACCTATACTCAAACGATGTATCCTAATTTCCTGGATCAGAAGTCTCGAGAAGTGATTGAGTACAGCTCTGAGTATATTCTCATAAGCGTGCTGCACAACTTGCTGCAAGGAGAATGCAATCCAGATCTGAGGCTCCTGGGGTGCTCAGTGCTGGCCCCACAGTGTGAAAAGGACAAAGTTATAAAGCCTTGCAGGCATGTATGTGAAAACCTGAAAAAAAATTGCCTCTCTGCTTTTGATGCAATAGACATGGCCTGGCCCTACTTCTTAGACTGTGATCGGTTTTTTGCTGGGGAAGAAGAAGGGTGTTTTGACCCACTGGCAAAGCTGCGAGGTAAGGAAA ..:.x::.:.x:...x.xx.........x.x:xx:.x..xx.:..:.xx....:::....:.x:..x..x.:x.x:..:..::.x..xx.x..xx:...x:.:..:...:.x...xx......:.....:..:..xx.:.....x..:...x.x:.x...x....xx.:.....:..:..:...x....x.....x..:x.x...........x.:......:::x.:.x::..xxxx.::..:...x....::.x..:..:::....x:::.::x:....xx:.:..:..:..:..x..x.....................:.x.....:x.:..x.x:..::.x:.:..:..x..:..x..:.x......:....x:.....x..:.......:.. 398M 253/398 63.6% 398/94230402 0.0% 0/398 0.0% -75562237 -18668165 +6508 chr4 + 190214555 8604025 8604024 8604342 318 CATCCGCTTCAGCCACCACTCCTACGCCCAGATGGTGCGTGTGCTGAGGCGGACGGCCTCCCGCTGCGCCCA--CGTGGCCAGGACCTACAGCATCGGGCGCAGCTTCGACGGCAGGGAGCTGCTGGTCATCGAGTTCTCCAGCCGCCCCGGCCAGCACGAGCTGAGTGAGTGCCCTTGGGAGAGCCTGGCCTGGCCCCGTTTCGGGA----------AAGGGCTTGGGCCGCTCCACCTTCGGGTGCACAAGTTGGTGGGGTGTTTGGGGTCCTGGGCAGAGCTGGGGGCCTCAGGGA-----GCTGCTTGGTGCAGGCCACGTCCCGCTGGGC chr4 + 94230402 24981113 24981112 24981432 24981113 24981112 24981432 320 CATCTCCTTCGAGTACCACCGCTACGCCGAGCTGCGGGAGGCGCTG--GTGGCCGTGTGGCTGCAGTGCCCGGCCATCAGCAGGATCTACACGGTGGGGCGCAGCTCCGAGGGCCGCGAGCTGCTGGTCATCGAGGTGTCCGACCGGCCCGGCGAGCACGAGCCCGGTAAGGG-ACGCGGAGGACTCTGCGGTGG--GCGCTGCGGCAgcgcggggcgaggggcgggcggtgcccccgctcccggcggaggggctgcggg------cggggggctgcgcggcgct----gcccccgggAACGGCGCTGCATCCCGGGGACTGCGCTGCGCTGCGC ....:x....::x:.....:x.......x..x..xx.x:x.:....--.:..x..xx:xx.:..x.:....:--.:.x:x.....:.....xx:.x..........:...x...x.x..................x.x...::...x......x.........:x:..:..x.-x.x:..::..x:...xxx...--x..:.x...x.----------.:....xx.x.x:..:..xx..:.x..:.x.x::.:..xx..------:....xx...x..:.x...----...:.x....-----.....x.xx:.x:.:.::..::x.....x.. 46M2D24M2I99M1D21M2D11M10I42M6D19M4D10M5I31M 198/303 65.3% 320/94230402 0.0% 32/303 10.6% -16377088 -77853314 +8619 chr4 + 190214555 8606731 8606730 8606904 174 TTTCAGGGTGCCGGCTACAACGGGTGGACGAGCGGGAGGCAGAACGCGCAGAACCTGGATCTGAACCGAAATTTCCCGGACCTGACGTCCGAGTACTACCGGCTGGCGGAGACCCGCGGCGCACGCAGCGACCACATCCCCATCCCCCAGCACTACTGGTGGGGTAAGGTAGGA chr4 + 94230402 84167315 84167314 84167488 84167315 84167314 84167488 174 TCTTAGGGTGCTGGTTACAATGGATGGGTGATTGGCCGGCAGACAGCTCAGAACTTGGACCTGAACAGAAATTTCCCTGATCTGACTTCAGAAGCTTACAGAAGAGCTGGGATTCGTGGGGCCCGCTTGGACCATATCCCCATTCCACAATCCTACTGGTGGGGTAAGGTATGA .:.:.......:..:.....:..:...::..x:..xx......xx..x......:....:......x..........x..:.....x..x..:xx:...x.:xx:..x.:..::..:..x..x...xxx.....:........:..x..::x...................x.. 174M 126/174 72.4% 174/94230402 0.0% 0/174 0.0% -75560584 -18669818 +9043 chr4 + 190214555 8607243 8607242 8607429 187 GGCGGCCTCGTCTGTCCTGGG---CAGGTGGCCCCGGAGACAAAGGCAATCATGAAGTGGATGCAGACCATACCCTTTGTGCTCTCAGCCAGCCTTCATGGGGGCGACCTGGTGGTGTCCTACCCCTTCGACTTCTCCAAGCACCCCCAGGAGGAGAAGATGTTTTCTCCCACGCCCGACGAGAAGGTGA chr4 + 94230402 84175068 84175067 84175255 84175068 84175067 84175255 188 GGCTACTTCTTCT--CCTGGTTTTCAGGTGGCACCTGAGACTAAAGCAGTGATGAAGTGGATGAGGTCCATCCCGTTTGTGCTCTCTGCCAGCCTCCATGGGGGTGAACTGGTTGTGACTTATCCTTATGACTATTCAAGGCATCCTATGGAAGAAAAAGAGTTCTCCCCTACACCTGATGAGAAGGTAA ...x:.:..x...--.....x---........x..x.....x..:...:.x............x:.x....x..x...........x........:........:..x.....x...x.:..:..:.x:....x:..x.:...:..:xx...:..:..::x...:..:..:..:..:..:........:. 13M2D6M3I166M 138/185 74.6% 188/94230402 0.0% 5/185 2.7% -75567825 -18662577 +9165 chr4 + 190214555 8607243 8607242 8607429 187 GGCGGCCTCGTCTGTCCTGGG---CAGGTGGCCCCGGAGACAAAGGCAATCATGAAGTGGATGCAGACCATACCCTTTGTGCTCTCAGCCAGCCTTCATGGGGGCGACCTGGTGGTGTCCTACCCCTTCGACTTCTCCAAGCACCCCCAGGAGGAGAAGATGTTTTCTCCCACGCCCGACGAGAAGGTGA chr4 + 94230402 84173385 84173384 84173572 84173385 84173384 84173572 188 GGCTACTTCTTCT--CCTGGTTTTCAGGTGGCACCTGAGACTAAAGCAGTGATGAAGTGGATGAGGTCCATCCCGTTTGTGCTCTCTGCCAGCCTCCATGGGGGTGAACTGGTTGTGACTTATCCTTATGACTATTCAAGGCATCCTATGGAAGAAAAAGAGTTCTCTCCTACACCTGATGAGAAGGTAA ...x:.:..x...--.....x---........x..x.....x..:...:.x............x:.x....x..x...........x........:........:..x.....x...x.:..:..:.x:....x:..x.:...:..:xx...:..:..::x...:.....:..:..:..:........:. 13M2D6M3I166M 139/185 75.1% 188/94230402 0.0% 5/185 2.7% -75566142 -18664260 +3971 chr4 + 190214555 8607265 8607264 8607370 106 AGGTGGCCCCGGAGACAAAGGCAATCATGAAGTGGATGCAGACCATACCCTTTGTGCTCTCAGCCAGCCTTCATGGGGGCGACCTGGTGGTGTCCTACCCCTTCGA chr4 + 94230402 25015520 25015519 25015625 25015520 25015519 25015625 106 AGCTTGCTCCTGAAACGAAAGGTGTCATTCACTGGATTATGGATATTCCCTTTGTGCTCTCTGCCAATCTTCATGGAGGAGACCTTGTTGCAAATTACCCTTATGA ..x.x..:..x..:..:..:.xx:....xx.x.....xxx.:x:..x..............x....::........:..x.....x..x.::xx:.....:.x:.. 106M 71/106 67.0% 106/94230402 0.0% 0/106 0.0% -16408255 -77822147 +6642 chr4 + 190214555 8612017 8612016 8612164 148 TCTTTTCCAGATGTTCAAGCTGCTGTCCAGAGCCTACGCTGACGTCCACCCCATGATGATGGACAGGTCGGAGAATAGGTGTGGAGGCAATTTCCTGAAGAGGGGGAGCATCATCAACGGGGCGGACTGGTACAGCTTCACGGGAGGT chr4 + 94230402 84178505 84178504 84178652 84178505 84178504 84178652 148 TTTTTTTCAGATGTTTAAAATGCTGGCAAAAGCCTATGCTGATGCACATCCAGTCATCTCAGACCGATCGGAACATCGCTGTGGTGGAAATTTTGTAAAACGTGGAGGTATTATAAATGGTGCTGAGTGGTACAGCTTCACTGGAGGT .:....:........:..:x.....x.x.:......:.....:.:x..:..x:.x..xx::...x.:.....:x..x.x.....x..x.....:x.:..:x.x..::.:..:..x..:..x..x..x..............x...... 148M 104/148 70.3% 148/94230402 0.0% 0/148 0.0% -75566488 -18663914 +6567 chr4 + 190214555 8614353 8614352 8614522 170 CCACAGGCATGTCCGATTTCAACTACCTGCACACCAACTGCTTTGAGATCACGGTAGAGCTGGGCTGTGTGAAGTTCCCCCCCGAGGAGGCCCTGTACATACTCTGGCAGCACAACAAGGAGTCACTCCTGAATTTCGTGGAGACGGTGAGTTCTGACGGTCTCAGGGCT chr4 + 94230402 84179719 84179718 84179888 84179719 84179718 84179888 170 CTGTAGGTATGGCAGATTTTAATTACCTGCATACAAATTGCTTTGAAGTTACTGTGGAGGTAGGATGTGAAAAATTTCCTCTGGAAGAAGAACTGTTTACAATCTGGCATGAAAACAGAGATGCCCTTCTGAACTACATGGAGATGGTATGACTCTACTTTTTCAGACCT .:::...:...x.x.....:..:........:..x..:........::.:..x..:...x.:..x....x:..:..:..:.:x..:..:.xx....x:.:.x.......xx.x....::..xx.x..:.....:.x.:......:...:x.x:::x..xx.:....:x.. 170M 111/170 65.3% 170/94230402 0.0% 0/170 0.0% -75565366 -18665036 +6348 chr4 + 190214555 8618410 8618409 8618557 148 CTCCCCTTGGTCTC----TTCAGGTGCACCGGGGCATCAAAGGTGTGGTGACAGATAAATTCGGCAAGCCAGTCAAAAACGCCCGGATCTCAGTCAAAGGCATTCGCCACGACATCACCACAGGTGA---GCACGTCCCTGGCTGTCCCCTGGGG chr4 + 94230402 84186154 84186153 84186308 84186154 84186153 84186308 155 CTCTCTTTGCTTTTCATTTCCAGGTTCATCGGGGAATAAAAGGAATTGTGTCTGATAAATTTGGCAACCCAATTAAAAATGCTAGAATTTCAGTCAGAGGCATCCAGCATGATATCACCACAGGTAATGTTTTTATTTCAGACTTTTTCCTGGGG ...:.:...x.:.:----.:.....x..:.....x..x.....x:.x...x.x........:.....x...:.:.....:..:x.:..:.......:......:.:x..:..:............:.---x:x::.::.x.:..x.::....... 14M4I109M3I25M 105/148 70.9% 155/94230402 0.0% 7/148 4.7% -75567744 -18662658 +6386 chr4 + 190214555 8618410 8618409 8618532 123 CTCCCCTTGGTCTCTTCAGGTGCACCGGGGCATCAAAGGTGTGGTGACAGATAAATTCGGCAAGCCAGTCAAAAACGCCCGGATCTCAGTCAAAGGCATTCGCCACGACATCACCACAGGTGA chr4 + 94230402 84182989 84182988 84183111 84182989 84182988 84183111 123 CTTTGCTTTGCGTTTCCAGGTTCATCGGGGAATAAAAGGAATTGTGTCTGATAAATTTGGCAACCCAATTAAAAATGCTAGAATTTCAGTCAGAGGCATCCAGCATGATATCACCACAGGTAA ..::x...x.:x.:.:.....x..:.....x..x.....x:.x...x.x........:.....x...:.:.....:..:x.:..:.......:......:.:x..:..:............:. 123M 90/123 73.2% 123/94230402 0.0% 0/123 0.0% -75564579 -18665823 +11192 chr4 + 190214555 8619247 8619246 8619613 367 TCTATTTGTCCACAGCCCCAGATGGTGACTACTGGAGACTGCTGCCCCCAGGTATCCACATTGTCATTGCCCAAGCCCCTGGCTACGCCAAAGTCATCAAGAAAGTCATCATCCCCGCCCGGATGAAGAGGGCTGGCCGTGTGGACTTCATTCTGCAACCTCTGGGGATGGGACCCAAGAACTTTATTCA-TGGGCTGCGGAGGAC-----TGGGCCCCACGACCCACTGGGAGGTGCCAGCTCTTTGGGGGAGGCCACGGAGCCCGACCCGCTCCGGGCGCGCAGGC-------AGCCCTCGGCCGA-CGGGAGTAAGCCCTGGTGGTGGTCCTACTTCACATCGCTGAGCACCCACAGGCCACGCTGGCTGCTCAAGTA chr4 + 94230402 84188077 84188076 84188434 84188077 84188076 84188434 358 TTTGCCTTTCCAAAGCTGCTGATGGAGACTACTGGCGACTCCTGCCTCCAGGGACATATATAGTCACTGCCCAAGCCATGGGCTATACCAAGGTGATGAAAAGAGTCACCCTTCCCATCAAGATGAAACGGGCTGGACGAGTTGATTTTGTCCTGAGACCTATTGAGATTTGGCCTAACAAGCTTCTTCGCCGGCCCATGGAGGACATGTATGACCAATATGACCCACTGG--------AACTGTTTGA---------------CCCTCACGCTCAACATGCACAGGCTCGGGGAGGGTCACAACAGGTCAGGGAGAAGCCCTGGTGGTGGTCCTACTTCAGCTCTCTAGACCTGCATAAACCCCTCTGGCTGCTTAAGCA .:.:::.x....x...:x.x.....x.........x....x.....:.....x.:x:.:..x....:..........x:x.....::....:..x..x..:.:.....:.x.:...::.x:......:x.......x..x..x..:..::.:...x:....x.x.:...xx.:..:..x..x:..x...:-:..x.:::.......-----..:x.xx:.:..........--------.:..x....:---------------..xx.x.....x:x::..:.....-------:.x:.x.::.x.:-.:..::x.........................xx..x..:::.x:x..:.::..x.x.........:...:. 190M1I15M5I20M8D10M15D24M7I13M1I72M 233/344 67.7% 358/94230402 0.0% 37/344 10.8% -75568830 -18661572 +3346 chr4 + 190214555 8619252 8619251 8619362 111 TTGTCCACAGCCCCAGATGGTGACTACTGGAGACTGCTGCCCCCAGGTATCCACATTGTCATTGCCCAAGCCCCTGGCTACGCCAAAGTCATCAAGAAAGTCATCATCCCC chr4 + 94230402 25025700 25025699 25025810 25025700 25025699 25025810 111 TTCTCTGCAGCCAAGGATGGTGATTACTGGAGACTGCTTGTGCCTGGAAACTACAAACTCACAGCCTCAGCACCAGGTTATCTAGCAATAACTAAAAAAGTAGCTGTGCCC ..x..::.....xx:........:..............xx:x..x..x.x.:...xxx...:x...:x...x..x..:..:x:x:x.:.x.::..:.....x::::.x... 111M 69/111 62.2% 111/94230402 0.0% 0/111 0.0% -16406448 -77823954 +3058 chr4 + 190214555 8624453 8624452 8624511 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACAGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -67408753 -26821649 +3058 chr4 + 190214555 8630094 8630093 8630152 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACAGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -67403112 -26827290 +3058 chr4 + 190214555 8635736 8635735 8635794 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACAGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -67397470 -26832932 +6761 chr4 + 190214555 8646701 8646700 8646878 178 GAGAATTGGAGGAAAAAAAATCCCTTCCGACGCTCTAAGCCCGGG----CCAGAGTGCCTGGAGCTCAATGGAGCGGGCATAATTTGTTTGCTTTGCAATTCTCTCCCCTCAGTGGAGACAAATTGATTTCTACGTGGAAATGGGCCGTGGCTGGGAGGCGGCGGGCTTGTGAGAGGGCAAG chr4 + 94230402 84206349 84206348 84206526 84206349 84206348 84206526 178 GAGACTGGCAGGGGGAAA----TCTTCTCAAGCTGTAAGCTCAGCGTCCCTGGAGTGAATAGGGTTCAATGTAGCATGGATAATTTGTTTGCTTTGCAATTATTTTCCGTCAGTGGAGACAAATTGATTTGTACAATAAAATTGACGGTCACTGCAAGGCAGTTGGCTTTCTAAACTGTAAG ....x.x.x...:::...----:....:x.x...x.....:.:.x----.::.....xx.:.:.:......x...:x.x......................x.:.:..x.....................x...:xx:....x.:.x..x:...x:....:.:x.....x:x.:.xx.:... 18M4D23M4I133M 123/174 70.7% 178/94230402 0.0% 8/174 4.6% -75559648 -18670754 +6761 chr4 + 190214555 8646701 8646700 8646878 178 GAGAATTGGAGGAAAAAAAATCCCTTCCGACGCTCTAAGCCCGGG----CCAGAGTGCCTGGAGCTCAATGGAGCGGGCATAATTTGTTTGCTTTGCAATTCTCTCCCCTCAGTGGAGACAAATTGATTTCTACGTGGAAATGGGCCGTGGCTGGGAGGCGGCGGGCTTGTGAGAGGGCAAG chr4 + 94230402 84203797 84203796 84203974 84203797 84203796 84203974 178 GAGACTGGCAGGGGGAAA----TCTTCTCAAGCTGTAAGCTCAGCGTCCCTGGAGTGAATAGGGTTCAATGTAGCATGGATAATTTGTTTGCTTTGCAATTATTTTCCGTCAGTGGAGACAAATTGATTTGTACAATAAAATTGACGGTCACTGCAAGGCAGTTGGCTTTCTAAACTGTAAG ....x.x.x...:::...----:....:x.x...x.....:.:.x----.::.....xx.:.:.:......x...:x.x......................x.:.:..x.....................x...:xx:....x.:.x..x:...x:....:.:x.....x:x.:.xx.:... 18M4D23M4I133M 123/174 70.7% 178/94230402 0.0% 8/174 4.6% -75557096 -18673306 +7909 chr4 + 190214555 8649444 8649443 8649750 307 CGGGCCAAGCCCATGATGCCAGAATTAATATGTAAGATAAACAGACCCCTGGAGGCGCTGATCGCATTCTCCAGGCCCAGG--TCAGAGGTCTGCTCTTTAGGTGTGAGAAAAGGTTTAGGGAGTACCAGGGTCAAATATTTGCAG-CCCAGACAGGCTGACAATGGGCTGGGTACTGGCCTCCCCCAGGCCAGCGGGGCTCCCTGGCTGTGCTTGGGGGAAGGGGAGCGGTCAGAGTGGACTCATTACTCGGAAAGCCCGAGAAAGTTGTCTGCAGCTGCTCTCGGCTGCCAGAGCACATCAGCATCAG chr4 + 94230402 84207601 84207600 84207901 84207601 84207600 84207901 301 CAGTTCAAGCACGTTTGGCCGGGCTTAGCACACAAGGTAAACAAAGCACTCTGAGCACTGATCAAAGTG--CAGGTTTGGGGGCCAGTGGCATGATCTTTAGGTGTGAGAAAGAAAATTTGGAGGAAGAAGGTCACATGTTTGAAGGTCCAGACAATCAGGCTTCAGCTTGACCTCTCTGCTTAACTGGG--AGCAGCTCTCCCCAGCTACTCATGTGAGCAGGGT-----TCAGAGGTCACCAATTACTTAGGGAGGCTGAGAAAGTTGTATGGAGCTGCTCTCAGCTGCCATTTCACATTAACATCAG .:.x:.....x.:.xxx...:.:x...::.:::...:......:.x.x..xx::..:......:x.x.x--....::::..--:...x..:x..x.................:::xx.xx....x.xx.:.....x..:....x..-:.......:x.x.:.xx::.x:..:x:x..xxx..:xx.::..--...:.xx.....::...::x.x..x.:.x....x-----......xxx..:x......::.::..x.:...........x..x..........:.......xxx.....:.:...... 69M2D10M2I63M1I43M2D34M5D79M 191/298 64.1% 301/94230402 0.0% 12/298 4.0% -75558157 -18672245 +3009 chr4 + 190214555 8661658 8661657 8661716 59 GAAAGAGAGTATAGTAGAGGAGAAAGAAAGAAGAAATATAAAAAAAGAAACTGCTATGA chr4 + 94230402 58603625 58603624 58603683 58603625 58603624 58603683 59 GGGAAAGGGTTAAGGAGAAGAGGAAGTAGGAAGAAATGCAAAAATAGAAACTTCTGTGA .::.:..:..xx..x...:...:...x.:........::.....x.......x..:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -49941967 -44288435 +16977 chr4 + 190214555 8664925 8664924 8665295 371 TTCCCAGAGATATACGGCTGCTGCCAATGACAGCAAAACCAATGCTGCCTC----CTCCATTATCATTCTGGGCCAAATCAATATCAAAACAACCGAAGTCTAGACGCATAAATGTCAAACTATTTAACAAGAAGCAGTTAGTGCAG-AAAAAACACTTAAATAGCAATTGAGGGGGTCTGATGAGCCTTAAAGTAACTTAGGAGGATTTATGGAAGATAAAAACCGTTTAACTAAGCCTG--GAGCCGAGCCC-----CTGGTGGCCTAGCA------TGGGAGGCCAT------GCTGTATCCTCTCTGCTAGGCTGCCGAAC-CGGCTGCTTGGTCAGAGAAAAGGGGCC--CTTGTTCTTCTGGTCATTTCTGCCCCAG-TCTGTGCTTCAGGTT chr4 + 94230402 84231070 84231069 84231465 84231070 84231069 84231465 396 TTCAAAGAGATATATTGCTGCTAGATATGACAGCAAAAGTAATATTGCCACTATGCTCCATTATCATTCTGTACAAAATCAATATCAAAACAACCTAAGTCTAGACACATAAATGTCAAACTATTTAACAAGAAGCAGTTAGTGCAGAAAAAAACACTTAAATGGCAATTGAGGTAGTCTGATGGGTCTTAAAGTAGCTTACCAGGATTTATGTAAGATAAAAACAGTTTAACTAAGCATGTAGAGCAAAGCCTGAGGGCTTATGGCTAAGAACAATATCAGAAGAACATCTAAGCTCTTTATCGTACCTGTCAGGTCCTAGTACTTGGCTGTTCTGTCAAAGGTAGAAGGCCTTCTAAATTTCCTA---ATTTCCTCCTTGGTTTTGTGTTTTAGGTT ...xx.........:x......:xxx............x:...::....x.----................x:.x....................x..........:........................................-...............:..........x:........:.:.........:....xx..........x...........x............x..--....x:....:-----..x:....:x..x.------::.:..:x...------x..x....x.x:...::...::x:x.x..-:.....:.:x....:..:x.:::....--..x:x.:.:..:---.....:x..:::.-.:....:..:..... 51M4I92M1I93M2I11M5I14M6I11M6I29M1I27M2I12M3D13M1I15M 289/368 78.5% 396/94230402 0.0% 31/368 8.4% -75566145 -18664257 +3277 chr4 + 190214555 8673460 8673459 8673542 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x.xx.x...x::........x:.:..x.xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -67359737 -26870665 +3149 chr4 + 190214555 8673571 8673570 8673651 81 GACTGGGAAACAGAGCGAGACTCCATCTCAACAACAACTACAACAACAACAAAAAAAAAAAAAAAAAAAGAGGGAGCAGAA chr4 + 94230402 83870593 83870592 83870673 83870593 83870592 83870673 81 GACAGGCGAGCAGAGCTTCAGGCTATGACAATAACAACAACAACAACAAACTGAACAAAAAAAAAAAAAAGGAGAAAAGGA ...x..x:.:......xxx.xx.:..xx...:......x..........xxx:..x.............::.:..:x..:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -75197022 -19033380 +3812 chr4 + 190214555 8687694 8687693 8687768 75 GGGGCACCTGTAGTTCCAGCTACTCGGGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x................:.::........x.xx.x...x::...........:..x:xx:..:..:.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% -67345509 -26884893 +3284 chr4 + 190214555 8697749 8697748 8697795 47 TCCATCTCAAAAAAAGAAAAAAGAAAGAGAAAAGGAAAAGAAAGCAG chr4 + 94230402 26475366 26475365 26475411 26475366 26475365 26475411 46 TCCATCT-AAAAAAAGAATAAGGAAAGAGAAAGGAAAAAGAAAGCAG .......-..........x..:..........:.:............ 7M1D39M 42/46 91.3% 46/94230402 0.0% 1/46 2.2% -17777617 -76452785 +8883 chr4 + 190214555 8700223 8700222 8700727 505 GCACTTTGCAATTATCCTTTGAAATTAGAATATTCA-GCAGATGTTTCTATTTTCACCCAGTCCTGCTCTCTTTCCAACCCAGCGAAATTAGTTCCAAAGTCATTATT-----CACCTAATCACAGTAATAGTTTAACATCCGATCTGCCCTCTGTCCAGCCGGGGAGGAGAAGCGGCCAAAGCTCTATTT-TGGCACTTCCTTCCCACTGATCCCTTAATTAACTGGCATCTGTTCTAATACAAGTTAAATATTGCAGTTGACTTTATTTTCTCTCTCCCGGTCCTCCAGGTCCCGGGACAGG-------GTAGATAAAGTGAA-ACACATTTGCTTCCCCGGGCGGGAGGAAGGGACATGGAGCTGCCTCTCT-GGAAATGCGGC-CCATCAATCATAAACTGATTACAAATTCGTCACCTTGAATCAATTTCTGTTCACAAGTTCAAAAGGCACCCTGAGCTCGGGGCTATCTGGAA-----CATTCTACATGTGGAGAGGATTAACATTTGGTCGAATGCCTC chr4 + 94230402 84267169 84267168 84267671 84267169 84267168 84267671 503 GTACTTTGCAAATATGTTCAGAAAT------ATCCACGCAGATGTTTCTGTTT-AATCTTATTACACTTGCTTTTCCAGCTTGGAAATTTAATTCCAGGATCataattaataatacataat-----taataattt--CATTTAGTCCGAGTGATTACAAGGACTGTTGTGGTAGC--CAAAAGCAATATTTGTGTCATTTGCCTTTCATTGAACTTCTAAGGTAGTGACACTTGTTTTAATAAAAGATAAATATTACAGTTGAGTCTGTTTATTTTTTCCATTACATCTGGATTCTCTTTCTGGCTTTCCTTTAGGTAAATTTTTTACAAATCTTTTTC-------AAATATTAATGATATACCATTATCTTTTTCTAAAAGGCAGCTCCATCCATCATAA-TAGATTACAAATTTGTCACCTTGAATCAATTTTTGTTCACAAGTTCAAAAGGAAATATAAGTGCTTGAGGGCCCAGAAATATTTATTGTACATGTGGATATTATTAAAGTTTATTGAAATCCTTC .:.........x...x:.:x.....------..:..-............:...-x.:.:x:.:x::..:x....:.x.x.:x.x:..x...:.....:::....x...-----:..x....-----.....:...--...::::..:.xx:xx.xx.x..xxxx.xx.x:.x...--.x.....xx.....-..x..:..x.:.::..:...x.:::...xxx.x..:..::....:.....x...x........:.......x.:.:...x:.:.:...xxxx.x..::.:.:.:xxxx.x..-------x...:....x.xxx-...x..:.x:...-------:::x:xx.:x..:..:xx::.::..:.:.-x:...x..:..-.....x.......-:x...........:..................:...................x.x:x.:..:x.xx.:xx::.::...-----:...x..........x.xx.....x:...:x.x:...x.:.. 25M6D5M1I16M1D54M5I8M5D9M2D38M2D14M1I112M7I14M1I13M7D29M1I11M1I13M1D78M5I42M 310/481 64.4% 503/94230402 0.0% 46/481 9.6% -75566946 -18663456 +6635 chr4 + 190214555 8707216 8707215 8707356 141 TCTCCATGAGACTCTGCTTAGTAAATATTAATTTACCCTCAATTACTGATGACAGGTCGAGGAAGGCCTT------------GCCCGAGCCGCAGGATGAGGCTGTGTCCTTCAAAG----CCGGCACCAAGCAATTAGGGCTAATGGTGTCTGCAG chr4 + 94230402 84273228 84273227 84273384 84273228 84273227 84273384 157 TCTCTGTGAAACTCTGCTTAGTAAATATTAATTTACCCTCAATTACTAATGACAAGTGAAAGAAACCCTTGCATTCATCAGGGCCACAGCCCTAGGACATAAGTTTGTCCTTCAAAGCGATCAGCCATTCAACAATTAGAACTAATAGTCACTCCAG ....::...:.....................................:......:..x:.:...:x....------------...xx....x:....::x::x.x............----.x.x..::x.:.......::.....:..xx..x... 70M12I35M4I36M 108/141 76.6% 157/94230402 0.0% 16/141 11.3% -75566012 -18664390 +3058 chr4 + 190214555 8711814 8711813 8711872 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x:xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -67321392 -26909010 +4736 chr4 + 190214555 8717530 8717529 8717722 193 TGAAAGAGAGAAGAGAAAGAAAGAAGAGAGAGACAGAAAGA--AGGAAGGGAAGGGAAGAGAGA-------------AAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGA---AAAGAAAAGAAAGA----AAGAGAAAGAAAGAAAGAAA--AAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGA chr4 + 94230402 65771125 65771124 65771340 65771125 65771124 65771340 216 TGAAAAAG-GCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA .....:..-.x....:..x.::.x.:.x.:...:.....x.--...x....xx:.x....:.x.-------------.:....:.....:..x......:.....::x.x:...:xx....:..::....---.:..x:..:.x...----.:...:...::...:.:x..--...:.:x.x......x.:x..x:...xx..x...:...:..x.. 8M1D32M2I21M13I53M3I14M4I20M2I44M 130/192 67.7% 216/94230402 0.0% 25/192 13.0% -57053595 -37176807 +3157 chr4 + 190214555 8717592 8717591 8717700 109 AAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAG chr4 + 94230402 65363837 65363836 65363944 65363837 65363836 65363944 108 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAG-AGACGAAAAAATGATAGGAAGCAG ......x:..:..x.xx..:.x:.:.:....:::x.xx.....:...x..:.......::.:.x.x.:.:..:..xx:..:...-.:.x....:..x..x..:.:.x.. 84M1D24M 68/108 63.0% 108/94230402 0.0% 1/108 0.9% -56646245 -37584157 +3616 chr4 + 190214555 8717593 8717592 8717722 130 AGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAG---AAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGA--GAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .....:...:.x...:....x......:..:::...x.xxxx....x.x.:x......::.x:.:..x.xx....---...:...xxx.x..x.x.:.--:..:...x...::.x........:...:...:. 75M3I20M2D33M 85/128 66.4% 131/94230402 0.0% 5/128 3.9% -45294000 -48936402 +3016 chr4 + 190214555 8717595 8717594 8717660 66 AAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAA chr4 + 94230402 74519003 74519002 74519068 74519003 74519002 74519068 66 AGAGTAGGAAAAAGGAAGAAAGAAAGATAAAAAATAAAGTAACAGTAAACAACAAAAAGAACTAAA .:..x.:......::............x..:...x....x:.x..x..:x..x:.......xx... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -65801408 -28428994 +3160 chr4 + 190214555 8717611 8717610 8717687 77 AGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 89501678 89501677 89501754 89501678 89501677 89501754 77 AAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAA .:..x....:x...:.::............:.:.x....:.:.:x..:.:.:..xx.:..x....x:...:..x:.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -80784067 -13446335 +3240 chr4 + 190214555 8717638 8717637 8717769 132 AGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAGGAAGGGAAAGAAAGAAAGAAGAGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAA------TCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........:.::xx.x.:...:.....:.........x.:..:xxx....------xx.:..x.:.:x.x...::.x:...:.:...:......--..:..::..x..x.xxxx:...x.x...:....:.. 50M6D38M2D36M 80/124 64.5% 124/94230402 0.0% 8/124 6.5% -42430741 -51799661 +3170 chr4 + 190214555 8717641 8717640 8717765 125 AAGAAAAGAAAAGAAAGAAAGAGAAAGA-----AAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAGGAAGGGAAAGAAAGAAAGAA chr4 + 94230402 10269758 10269757 10269887 10269758 10269757 10269887 130 AGGCAAAGAAATATCAGAAATGTAAAGGTATTTCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAA .:.x.......x:xx.....x:x....:-----x.:.x.......x.:x.......::.::...x:...:..x:....:xx:.:.:..:x.x.:.:.:x..:::.:....x.xx..:....:....x:.. 28M5I97M 76/125 60.8% 130/94230402 0.0% 5/125 4.0% -1552117 -92678285 +3115 chr4 + 190214555 8717651 8717650 8717806 156 AAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAGGAAGGGAAAGAAAGAAAGAAGAGACAAAGAAAGAAGAAAGAAACAAGAAAGAAAGAAAGAA chr4 + 94230402 56107291 56107290 56107446 56107291 56107290 56107446 156 AGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAA .:.:.....x.x::x:....:..:..:x.:.........x.x:x:.:..:x.x:.x..:.:..x.x.:.:..:.:x..x:.:..:.:..x.:..:x.::.x.::xx:.x:..xx.x:::::x....:x.::...:...x..:x.:.....:.::.. 156M 83/156 53.2% 156/94230402 0.0% 0/156 0.0% -47389640 -46840762 +3019 chr4 + 190214555 8717745 8717744 8717794 50 GGAAGGGAAAGAAAGAAAGAAGAGACAAAGAAAGAAGAAAGAAACAAGAA chr4 + 94230402 60819213 60819212 60819262 60819213 60819212 60819262 50 GGAGGGGAAAAAAAAAAAGAGGAGACAGAGAGAGAGGAGAAATATAATAA ...:......:...:.....:......:...:...:..:.:.x.:..x.. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -52101468 -42128934 +3130 chr4 + 190214555 8717923 8717922 8717974 52 GTTACAGAAAGTTTCTTGTTTGTTTTTTTTGTTTGTTTTGTTTTTGGTTGAA chr4 + 94230402 81099529 81099528 81099580 81099529 81099528 81099580 52 GTTTTGGGGGGTTTTTTGTTTGTTTTTCTGTTTTGTTTTGTTTTTGGATGAA ...x::.:::....:............:.xx................x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -72381606 -21848796 +8105 chr4 + 190214555 8722481 8722480 8722737 257 TGCCTGATTAAATCTTGTCTGAATTATCAGGTACATAATAAGGCAAGTGTTAGCTTTGCAGCAGAGCTGAGCCGTCACTCTGTGTGGCTCGCCTTCATCTAAAAGAGACCAGATACTTCTCGGTGGCAACTAAGAACCAACATTTTTCTTATTTAAGATGATTGGAATGACGGATGCATAAATCATAACATATGAAATTCCCCCCGTCACTTAGACCCCTTTAATACTAAACATTTGTTCCAATTTCTTGACCACCG chr4 + 94230402 84281999 84281998 84282248 84281999 84281998 84282248 250 TGTTTAATTAAATCTTGTTTGAAATTGTACAAATAAAAGAAGATCTGTCTT-GCTCTGAGGT---GCT-AGCTGTCAATGGTTATTGTTAATCATAATCTAACAAATACCAGATACAGCTATTTGGCAATTGAGAAGTAACATTTTTCTTATTTAAGGTGATAGGAATGAAGGAAACGTTAATCATAACTTACTCATTTTCCCATAT--CTGAAAGTGCCTTAATACTTAACATTTGTCCACATTTCAAGACAACCG ..::.:............:....x.xx:.x:x.:.x..x...::xx..x..-...:..x:.:---...-...:....x.xxx.:.x.:.x::.x.x......x.:.x.........xx..xxx......:.:....x:...................:....x.......x...x:.:.x.........x..:xx.x..:...x::.--..x.:.x:x.:........x.........:.xx.....xx...x.... 51M1D10M3D3M1D138M2D48M 173/250 69.2% 250/94230402 0.0% 7/250 2.8% -75559518 -18670884 +4304 chr4 + 190214555 8745043 8745042 8745449 407 GAGGCAATTAATCCCATTAACAAGCAATAGTTCACAGCCTTCAACCGGGAGGCCGCC------------TTCATTA-CAGACTGTTAACC----------AAG--ATCTTCCTTAATCCCATGCAAGGCGTGCAGGCTGCTGCTGGGACACCCAGACACCAGCGGCCT--TGGGATTAACTGCTGCCCCCATCCCACCACAGCACCCCACGTCCGCACACAGCCCTTCCAGCATCCC-TGGGCACCGACGCCAGGGCTGGGCACATGGCAGCTGTACGGGGGTCCCCTCAAC--ATTCAGCGGATGTCAACAGCCCACTCCTGATTGGGAGTGATTGTTTTCAGCAT------GGAGTC-------AGCCCGGACTGGATT-------TATCAAACT--------GTTAACTGTGCTTATCGCAAATCACTTTAATGATGTGTTAACATTTAATTAGATCGCTAC chr4 + 94230402 84321627 84321626 84322079 84321627 84321626 84322079 453 GAAGCAATTAATCCCATTAATAAGCAATAATTCATATAATTCAGATCATGGGCTGTCACTATGAATGACTTCATTAGCTGGCTTTTTACCCTAGGCTAAAAAGTCAGCTTCATTAATTCCGTAGAAGGCTTATTTTCTTCTCTTGAAA-----AAACACAGTCGAACTCATTTAAAGAAATACTCCTCTTAACCAAAGATACCATCCGA-----GAAAAAAAAATATTCAGCAGCAAATTGCCATAAATGTTAAAAATATTAAAAGATCAA--ACACTTAGATCATATTTATGTATCTAATGCATGTTACCAGATAAGTACTGCTTATGAATAATGATTTTTATCATTATGAAGGATCCCAGTTAGAGTCCAGATTTGATAATGAGCATACCATGCTCACAAGGAGTTTAATATACTTATTACAAATCATTTTAATGATGTATTAACTTTTAATTAGATCTGTAC ..:.................:........:....:.xxx....:x:x:x:...:.:.------------.......-.x.:..x..x...----------...--.x....x.....:..:.:x.....x.::xxx..x..x:..::.-----.:....x:x..:x..--.xx:.xx..x.:..x.:.::.x..x.xx.:.x..:..x.-----.x.x.x.:xx:x.:.....x.xx-.x.x..:x:.:.::.:::x.:xxx.x.x:x..:--::..xx:.:..x:x.:x.:--..::.::.x....:.x...x:x.x.x...x..:x..:.:..x:....:.x...------...x:.-------..:..:..:.x...x-------..:..x:..--------...x.x.:.:.....::.......:...........:.....x............xx... 57M12I7M1I13M10I3M2I43M5D15M2I39M5D23M1I33M2D19M2I53M6I6M7I15M7I9M8I60M 246/395 62.3% 453/94230402 0.0% 70/395 17.7% -75576584 -18653818 +4904 chr4 + 190214555 8747541 8747540 8747679 139 GCAGCAGCTGTGCTGCAAACACCACCCTGGCTGTGC-------TCAGAGGCGGCCGGCCGCCCCGAGAAACCCTCCATGATGTGACGCGACCAGACAGGCGCAAGGAACAGGCCCCGCAGTCATGTAAAATGCAGGAGCGCTCCCA chr4 + 94230402 84322944 84322943 84323089 84322944 84322943 84323089 146 GTAGCAGCTGTGATGCAAACACCACGCTGGATGAGCAGCAAATCTTGCAGTGTAGAATTGTTCCAGTAAACGTTAAGTGATTTGAAAAGACCTGACAGGCGAGAACAGCAAGCCCTGGAGTCATGTAAAATGCAAGAGAAATACCA .:..........x............x....x..x..-------::x.x:.:.xxx::::.::..::x....x:.xx:....x...x:x....x........x:.:x.:..:....:.x................:...x:x.x... 36M7I103M 93/139 66.9% 146/94230402 0.0% 7/139 5.0% -75575403 -18654999 +3122 chr4 + 190214555 8758128 8758127 8758202 75 TGGCATATATATATATATAGATACACACACACACACACACACACA--CACACACACACACACACACA-----ATGGAATACT chr4 + 94230402 54963188 54963187 54963269 54963188 54963187 54963269 82 TAGTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCT .:.:x.:.....x:...:....:.....x:.:.:...........--...:::.:.x..:.......-----.:.....x.. 45M2I20M5I10M 55/75 73.3% 82/94230402 0.0% 7/75 9.3% -46205060 -48025342 +3196 chr4 + 190214555 8758961 8758960 8759049 89 ATATTTATATATTTATATATATTTATATATTTATATATATTTATATATTTTTATATTTATATTTTTATATTTTTGTATATATTTATATA chr4 + 94230402 23063162 23063161 23063250 23063162 23063161 23063250 89 ATACTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTTACAGCCATGACTTTATGGCTTTTTACCAATTTATACA ...:..:..xx.x.........x...:.:.x.:.:.:.....x.x.x......:.x::..:x:.....:x:...x..:xx.......:. 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% -14304201 -79926201 +3076 chr4 + 190214555 8759168 8759167 8759224 57 ATATGTATATTTATATATTTATATATTTATATATTTATATATATTTACATATTTATA chr4 + 94230402 66408428 66408427 66408484 66408428 66408427 66408484 57 ATATATAGACCTATATATTTTTGTATGCTTTTATTTTTATGTATTCACATATTTATA ....:..x.::.........x.:...x:x.x.....x...:....:........... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -57649260 -36581142 +3190 chr4 + 190214555 8759317 8759316 8759372 56 TATATATACTTATATATTTATATATATTTATATATTTATATTTTTATATATTTATA chr4 + 94230402 66408429 66408428 66408484 66408429 66408428 66408484 56 TATATAGACCTATATATTTTTGTATGCTTTTATTTTTATGTATTCACATATTTATA ......x..:.........x.:...::..x...x.....:.x..:.:......... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -57649112 -36581290 +3089 chr4 + 190214555 8759383 8759382 8759469 87 TATTTATATTTTTATATATTTATATATATTTATATATTTATATATTTATATATATTTATACATATATTTATACATATATTTATACAT chr4 + 94230402 81427530 81427529 81427616 81427530 81427529 81427616 87 TATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATAT ...x...:.x...::..:.x:.x.xx.x...xx...:x......:...x.......:..:..:........::..xx..xx:..:.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% -72668147 -21562255 +3276 chr4 + 190214555 8759390 8759389 8759494 105 ATTTTTATATATTTATATATATTTATATATTTATATATTTATATATATTTATACATATATTTATACATATATTTATA-----CATTTATATATTTATTTATATATATTTA chr4 + 94230402 22303518 22303517 22303627 22303518 22303517 22303627 110 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGCTATTTATAAAATTAATTTTCAATAGCTA ..x...x..x.x....:..::......:...x..x..........:.xx:..x::...:.x:::...x....x....-----:.......x.x...x..x.xx...x:.. 77M5I28M 72/105 68.6% 110/94230402 0.0% 5/105 4.8% -13544128 -80686274 +3033 chr4 + 190214555 8759500 8759499 8759575 76 ATATTTATTTATTTATATATATTTATACATATATTTATATATATTTATATATTTATTTATATATATTTATATATAT chr4 + 94230402 22303518 22303517 22303593 22303518 22303517 22303593 76 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATAT ......x.xx.x....:..::.........xx......x.....x:.x.:....:.x.:..:::.:xx........ 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -13544018 -80686384 +7912 chr4 + 190214555 8779798 8779797 8779943 146 CCGGGGACAATAATTAAGAATCAGGTTTCCCTCAAAAGGCTGTATTGCTGGGAGGGGTTATAAATCAA--GATGACATTTTTATCACAGAGCAAAAATTAATTATTTAACATGGGACATGTTTGTGCTCTCTTAACTGCCAGCAGGGT chr4 + 94230402 84360695 84360694 84360842 84360695 84360694 84360842 148 CCTGTGACAATAATTAAGAATCAGGTTTCCACCAAAAGGCTTTATAGCCAGAAGGGGTTGTAAATCGATGGGCAACATTTTTATCTCAGAATGAAAATTAATTATTCAGTGTCGAACATGCTTTCTCACACTTAACTGCCCGTAATGT ..x.x.........................x:.........x...x..::.:.......:......:.--.:::...........x....:::.............:.:::.x.:.....:..x:x.x.x..........x.:.:x.. 68M2I78M 112/146 76.7% 148/94230402 0.0% 2/146 1.4% -75580897 -18649505 +3442 chr4 + 190214555 8787931 8787930 8788014 84 ATATGGTGGTGGGTGCCTGTAATCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAAGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::......x::.--....:.:.....:.....::........x.xx.x...x::...........:..x.xx::....:.. 15M2D67M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% -67245265 -26985137 +10319 chr4 + 190214555 8795213 8795212 8795574 362 TTTAGTCTGCAAATACCCTGACAAGACAGGTCATCAATGTGAAATTATCACCATCAGCAGGGCC------AGGCGGC-CTGGCCTCCCATTATGACCAAATGAATAACTCCGTTTAGAGAAGTCGTTTAGGGCGCTGCCCCAGACAATGACTCCTGTCAAAAGATTTACCGAAGCTCA-GGGGCAATGTGGCGGGGAGGCCCCGTGGGCCTGGCCTCACAGT--TTATCAGCTCATGCAGAAAACAAAGATTGCAGCGTGGACCATTTCGCCGCTGAAATTCATGCCTTTTGACCCCAAATGAAGAGATAATCCCGGGGCTTGTTTCCACTTGAGCTTGGAGATATTGTAAACAGCTGGCTCTGAAGCAGAA chr4 + 94230402 84378621 84378620 84378982 84378621 84378620 84378982 362 TTCAGCTGGCACGTAAATTGACAAGAAATGTCATCAATGT-AAATTAACATTTTC----GGTCCCTTAGAAAACAGCACCAGCTTCATGTTACAACTAAAAGAATGGCTCCATTTTGGAAAGTCATTCCCTATCATGCTATAGACAATGACCCCTGTCAAAAGATTTAACAAAGTTCACAGGTCAATGCAGTGGGAGGATCTCTGCTGTCCTGATTCTTAGTAATAATTTAATCATGCAGAA---AAAGTTTTAAGTGTTGATAATTTAGTGAATGAAATTCATGCCTTTTGACCCTGAATGAAAAGACAAG--AGAGACTCGTCTTCAGTTAAGTTTAAAGCTATTTTTAAATACCTTTCCTGAACCAAGA ..:..::x...x:..xx:........x.x...........-......x..::x..----..x..------.::.:..-.::..:..x::...::..:...x....::....:...x.::.....:..:xxx::xx...:x:..........:................x.:...:...-:..x.....::.:...::.::.:.xxxx.:.:x.x:..x:...--.x..:x:x..........---....x..xx..:..x..:x....x.:x:x......................::......:...:..x--x.:.:..:..:.:..x..:..:..::..x....x.x..xx:.:xx::.....x..::. 40M1D14M4D5M6I7M1I100M1I43M2I18M3D67M2D58M 233/352 66.2% 362/94230402 0.0% 20/352 5.7% -75583408 -18646994 +27136 chr4 + 190214555 8837527 8837526 8838148 622 TTAAGAAGTTGCCTTAGGAAGGCCTGGCTTTGTTTGGGAAATTTCCCCCAGCTGAGAAGGAGAGGCCAGACAAGGAAAGAATGACCAATTATACGCTGTGTTGTCTTCAGATGAAAGGGCCTTTTTGTGGCCCTCCTCCATCTCCTGTTTGGGCTGTCAACAGCAATTTGACGAGGAATGTTGCTCGGCCTGACCTGTTTTTTCAAGATGGTAACCTATATTGTGTATCATCTCAGCCCTGGAGATCACCAGCCGGCACCCTCCTCAGCACAGTCCCC-CCAGTTGAACTTCACCTTTAAAAC-CAGGAAAATTGATTGGAAAAAAATTCAGGGAAATCTCCCACTAATGATATTTTGAGTTCAGGAACAAGGGGGGGAATTAAAGTGGCTTTAATCTGATTCT----------CAACA-TGGATTTCA---------------------------GTGGTGAATGGTCAATTGTTACTAAATTCTAATTGGTTCTGGGTCACTCCCTTTGAAATAGTGGCTGTGTTCTGTTCATTTTTTCAATTAAATCTTAACAATTCACATCTGACAAAACTCAAAAATCTTGTCAAAAATTGTTCAGATTTGTATAGTAAGAATGTGCAAGAAGCAACATGGAGCTTGGACTGGGGGAAACTTTCATA chr4 + 94230402 84397994 84397993 84398623 84397994 84397993 84398623 630 TCAAGAAACTGCATTAGGAA-------TTTTATTT------TTTCT----GCTGAGAAGGAGAGGATGAAGGAGGAAAGAATGACCAATTATAAACTCTGTTGTCTTTAGATGAAAGAACCTTTTTGTGGTATTCTTCAATCTCTTGTTTGGGCTGTCAACAGCAATTTGATAAAGAATGTTCCTATGTCTGACCTGTTTTTTCAAGATAGTAACCTATATTGTGTATCATCTAAAGACAGGGGATAATCATCCATTATACTCGGTACTGCTGTTCCTGCAAGCTGAGCATAGCCTTTAAAACTCAGATAAGTTGATT-GATAGTTGTGTTGAGAAAGCTGCTACTAATGATATTTT-AGTTAAAG----GGGAAAAAAATTAAAGTTTCTTTAATCTGATTCTCCCCCACCCCCAACACCACACTTCAGAGGCCAAAGCTCATGATAACTGTTTTGTGGTGAATGGTCAATTGTTACAAAATTCTAATTGGTTCTGGGTCAGTCCCTTTGAAATAGCTGCTGTGCTCTAGTAATTTTTTCAATTAATTCTTAACAA-------CTGACAAAACTT-TGGATCTTGTCAAAAATCATTCAGATTTTTATAGTAGGTAAGAACATGGAACAAGAT-TAGCCTGGATTAAGAAAGATTCCTACA .:.....::...x.......-------:...:...------....:----...............x:::.x:.....................x:..x.........:.........::...........:x:..:..x.....:..........................::.:.......x..xx.:....................:.......................x.:xx.x..:...x.:..x..:x:.:x...xx:.x::.x..:..:-.x..:...:.x.x:..........-...:x..:......-..x.:xx:.x:x.:....x..x.:..............-....x.:.----:..:::::.........xx...............----------.....-::x.:....---------------------------......................x.......................x..............:x......:...:x.x..............x.........-------...........:-x::..............::.........x.......:.x.x.x:..x.:.:...x..-x...:....:.::.::.:.:.:::.:. 20M7D8M6D5M4D228M1I24M1I14M1D38M1D8M4D34M10I5M1I9M27I101M7D12M1D57M1D27M 461/590 78.1% 630/94230402 0.0% 72/590 12.2% -75560467 -18669935 +5839 chr4 + 190214555 8841737 8841736 8842065 329 GATGATTGTGATGGTGGTGATGGTGATGATGGAGGTGGTGATGATGA---------------------TGGAAATGATGATGATGATGATGAAGATGGTGATGACAGTGGTGACGGTGATGACAGTGATGATGGTGATGGTGATGGTAGTGTTGATGATAATGGTGATGGTGGTGATGATGATGGC---------------GATGGTGGTGATGATGATGATGTTAGTGGTGGTGATGCTGATTATGCTGATGGTGATTATGGTGATGATAGTGATACTGTGGTGGTGAT----GGTGATGGTGATGTGGTGGTGCTGATGGTGGTGATGGTGGTAGTGATGTTGATGGTGGTGATGGTAGTGATGTTG chr4 + 94230402 92132550 92132549 92132910 92132550 92132549 92132910 361 GAAGATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAAT---ATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACAT-----TGGAGATGTTGGGGAAGCTGGCAGTCTTGTGGACATTGGGGACACTGGGGATACTG ..x...x.::...x...x....x...x..::xx..x.:..x..:x..---------------------...::...x...x....x..:x....x...::..---.x...x...:x..:x:......:x....x..:x.:..x...x::::...:x....x.x.x..x.x.:.:::..x..:x.:.---------------....x..:x..x....:..:.:..:.x.:..x..:x.x..x.x:x.x..x...:...xx...x:.:.x.:.x..:.:..x..x..:xx.----....x...x..::.-----..xx....x...x..x.x...:...xx...x..::x...x..::x.:.x...::.. 47M21I34M3D81M15I89M4I14M5D56M 199/321 62.0% 361/94230402 0.0% 48/321 15.0% -83290813 -10939589 +3010 chr4 + 190214555 8844653 8844652 8844719 67 TGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGACAATCGCTTGAACCAGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.............::........x.xx.xx..x.:........x:.:..x.xx:..:..::. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -67188558 -27041844 +26204 chr4 + 190214555 8867669 8867668 8868361 693 GGGAGAGGGCCCGG----------------CAGGCGGG-GCTCACACCAGGCCAGGCATCTGCGCCCGCAGAAAGGGCACGGAGGCGGCGGCCGGGAAGGCGGCCAGCGGGTAGGCGAGGGCCCCGGAGAAGCCGAGCAGCGGTGGGGGCGGCGCGGGCGCGGCGGGCGCCAGCGGGAAGGGCAGGGTGGCCGGGGGCCCAGCGGCGGCTGCGGCCGGGGGGCTTTCGTGGTAGAGCACCGGCACGCGGACCAGGCGCTGCGCTCCCGGCGGG-GACAGGCTGGCCGCCTCCAGCTCGGCTGCCAGCTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAGATCTTAACCTGCGTCTCGGTGAGCTGCAGGGAGGCGGCCAGGCCGGCGCGCTCGGCGCTGCTCAGGTAGCGCTTCAGGTCGAAGGTGGATTCCAGCTGGAAGACCTGGCTGCGGGAGAAGACTGTGCGCGTCTTCTTCTTTCGGCCGCCGCCCACGCCAACGCCGCCGCGTGTCTCCCCAGCCGCCGCAGGGACCTCGGCCAGCTCCGACGCCTCCTCCGTGCCGGCCGCCGGGCCACGCGCCGCCAGCTCCGCTGCCTCCCGCTGCACCGCTCCCGGCCCGGGGCCTCGCG---------GCCAGGCGCCCTCCGCACGGCCCATCTCCTCGCCCGTCTCCGGTGAGTCCCGGTCGCTGGCTGCAGGGGAGAGAGG chr4 + 94230402 84420462 84420461 84421087 84420462 84420461 84421087 626 GGGAGGGGGCTCGGGGCCGCGGTCCCGACACAGGTGGGCGCTCAAACGAGTCCCGTCATCTGCGAGCAAAGGAAGGGAAGGGAGGCGGCGG---GGAAGGTGCCCAGGGGGTAACTGACGCCGCCGGAGAAGCCCACCAAGGGGGGGGACAT-----------------------------GTGGGGCAGGCCGAAGCCCAA----GGCGCTGGCCGGCGAGTTCTCGTGGTACAAAATGGGGACCCGCACAATCCTTTGGGC----GGCGTGTGAGAGGTTGGCCGCCTCCAGGTCGGCGGCGAGCTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAAATCTTCACCTGCGTCTCGGTGAGGTGCAGCGAGGCGGCCAGGCCGGCCCTCTCGGAGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTGCGGCTGAACACCGTGCGCGTCTTCTTCTTGCGGCCGGCGGCT-------CGCTGCTCCGCTTCGCCC-----------GCTTCCTCGCCGCGTTCCTCCTCTTCCTC----GCGGCCTCCGG-------------AGCT---CTGCCTcccgcc-------------cgcggggccccgcgccgccgcccgcccgccgccgcccgcccgcTCCGTGTCCTCGGGCAGCTCCGGCGAGTCCCGGTCGCTGGCTGC---GGAGAGAGG .....:....:...----------------....:...-.....x..x..x..x.x........xx.:x..:.....x.x...........---......:.x....x.....:x:..x.x.x...........x.x..:x..x....:.:x-----------------------------.::...::.x.x.::.....:----...xx:......x.:.:.:........x.:x.:x..x..x..x..x.xx.x:..x..----....x.-..x...:.............x.....x..x......................................:.....x.................x.....x.................x.x.....x....................x............:........................xx...x..:.................x......x..x.:-------...:..:x..:x..x...-----------.xxx.....x.xx.:...xx.x.:.....----x.....x....-------------....---...........:-------------.x.......:....---------...x.x....x:....x..x:..:.x......xx.:x......:....................---......... 14M16I8M1I52M3D58M29D21M4D57M4D6M1I222M7D18M11D29M4D11M13D4M3D12M13D14M9I64M3D9M 478/599 79.8% 626/94230402 0.0% 121/599 20.2% -75552793 -18677609 +16273 chr4 + 190214555 8867775 8867774 8868285 511 CCGGAGAAGCCGAGCAGCGGTGGGGG-CGGCGCGGGCGCGGCGGGCGCCAGCGGGAAGGGCAGGGTGGCCGGGGGCCCAGCGGCGGCTGCGGCCGGGGGGCTTTCGTGGTAGAGCACCGGCACGCGGACCAGGCGCTGCG---------------CTCCCGGCGGGGACAGGCTGGCCG----CCTCCAGCTCGGCTGCCAGCTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAGATCTTAACCTGCGTCTCGGTGAGCTGCAGGGAGGCGGCCAGGCCGGCGCGCTCGGCGCTGCTCAGGTAGCGCTTCAGGTCGAAGGTGGATTCCAGCTGGAAGACCTGGCTGCGGGAGAAGACTGTGCGCGTCTTCTTCTTTCGGCC---------------GCCGCCCACGCCAACGCCGCCGCGTGTCTCCCCAGCCGCCGCAGGGACCTCGGCCAGCTCCGACG--CCTCCTCCGTGCCGGCCGCCGGGCCACGCGCCGCCAGCTCCGCTGCCTCC-CGCTGCACCGCTC-CCGGCCCGGGGCCTCGCG chr4 + 94230402 84411093 84411092 84411619 84411093 84411092 84411619 527 CCGGACCGGGAAGGCAGAGGTAGGGGATGGCGCTGCCCGGGTAGAA--CAGAGGGAAGGG--GAGTGGCAG-----CAGGCAGCGGCTGAG--CAGGGCGCTGTCCTTGTATAGGGCCGGGAAGGAGAA-AGAGGCGGCGGGAGGCGGAGGGGGCTCCCCTGGGGGTTCCGCTTGGCTCGGACCCTCGGGTTCAGCCGACAGCTGTCTCTTGAGCTTGTTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGTGCAGCGCAGCGGCCAGACCGGCCCGCTCGGCGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTCTTGGAGAAGATGGTCCGCGTCTTCTTCTTGCCTCCCGCCGCTGAACACCTGCCGCTCTCTCTACCGCAGCCCCCGGTATC--------CCGCAGCGACGGCTGTCGGCATCCGCGGAACCTCTCCGTGGAGAGCGGTGAAAC-CGCGCCTTCGGCCTCG--GCATCCGCGCGGCGCGGCCCTTCCGCCAGCAGCCTCTCG .....xx:.xx::....x...:....-:.....x.x.xx..::.:x--...x........--.:.....x.-----.x:..:.......x.--.:...x...x..x.x...x..x:....x.x.x:..x-..:x..x...---------------::...x.x...xx.x.x:....:x----....x:.:..:..:.x......:.x...xx:..............................x.................x.....x.x:........:.....x............................x............:....................x:x........:x..x..............x.xx..---------------.....:.x.x.:.x...x...x.xx..x..--------......x...xx.x.:.:..x:.x:..--x.::.......xx.:x..x:.::x.-......x:.:..::..--..x...-...x..:.x..:.-:.x...x.x:.....x.. 26M1I19M2D12M2D9M5D15M2D36M1D10M15I24M4I202M15I30M8D27M2I25M1D16M2D6M1I13M1I18M 359/488 73.6% 527/94230402 0.0% 62/488 12.7% -75543318 -18687084 +5654 chr4 + 190214555 8867957 8867956 8868131 175 CTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAGATCTTAACCTGCGTCTCGGTGAGCTGCAGGGAGGCGGCCAGGCCGGCGCGCTCGGCGCTGCT----CAGGTAGCGCTTCAGGTCGAAGGTGGA------TTCCAGCTGGAAGACCTGGCTGCGGGAGAAGACTGTGCGCGTCTTCTTC chr4 + 94230402 67334314 67334313 67334488 67334314 67334313 67334488 175 CTCCTTCTTGTGCTTGACGCGGCGGTTCTGGAACCAGATCTTCACCTGCTTCTCGGAGAGGTTCAGGTACGTGGCTATCTCGATG----CGGCGCAGCCGGGACAGGTA------CATGTTGGACGAGAACTCCCGCTCCAGCTCCAGGAGCTGCGTGCTGGTGAACGCCGTCCGCATCCTCTTC ..x.:x...x::....x:........................x......x......x...x.x....x.x.:...:.xx:..::.----......x..:----......------..x..:.:.x.x.:.------:.......xx.:..x...xx...x..x...x:.:..x...:..:..... 85M4D10M4I6M6D15M6I49M 120/165 72.7% 175/94230402 0.0% 20/165 12.1% -58466357 -35764045 +3158 chr4 + 190214555 8877370 8877369 8877449 80 GGGGGTGGAAGGGAAGAAGGA-----GTGGGAGGAGAAATGGAGGGGGAAGGAGAGAGGAGGAAGAAGAAGGAGAAAAGAGGAGG chr4 + 94230402 644758 644757 644842 644758 644757 644842 85 GGAGGTGACAGGGAGGGAAAGTCATGATGGAGGCAGAAATGGGGGGAGAGGTAGAGAAAAGAGCAGAGAAGGAGATGGGAGAGGG ..:....:x.....:.:.:::-----:...::.x........:...:..:.x.....::..::x::.........x::...::.. 21M5I59M 52/80 65.0% 85/94230402 0.0% 5/80 6.2% 8232612 NA +3837 chr4 + 190214555 8890936 8890935 8891009 74 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTTGGAGGATCGCTTGAGCCCAGGAGGTCGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.::........x::x.x.:.x.:.....:.....:..x.:x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -67142268 -27088134 +3602 chr4 + 190214555 8918812 8918811 8918982 171 TTCTTTCTTTCTTTCCTT---CCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTCCT--TCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTC--CTTCCGTCCCTTCCTT--TCTCATTCTTCTTTTTCTTTCTTTCTCT chr4 + 94230402 33237582 33237581 33237764 33237582 33237581 33237764 183 TTTTATCCGTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTTGGTCT ..:.x..:x...:.....---..x:...x...x:..:xx..:..--....x:..::..--..::..x:.x:..x.x.x..xxx...::.:....x.:.:.x-...x.::....x:...x:...:...x:.:....--:.:..x......:.:.--...:.....x....x...:....xx... 18M3I23M2I12M2I41M1I33M2I16M2I28M 112/171 65.5% 183/94230402 0.0% 12/171 7.0% -24318770 -69911632 +3011 chr4 + 190214555 8918840 8918839 8918920 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -48453189 -45777213 +4137 chr4 + 190214555 8918840 8918839 8918991 152 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTAT-CCGCCCACTTTTGCATTGTTCTTTCTGTTCTTT--GTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCT-TTTCTTTCTCCTCCATTCTT ..:..x:..:x..x.::.....:.......:x.-..x:..x:.:..x.x..x..::..::x......--x.x..:x...:.x...............:xxxx..xx..:::..x..:..x.x::..:..:.-..........:.:.x..... 33M1D33M2D62M1D20M 97/148 65.5% 148/94230402 0.0% 4/148 2.7% -41257427 -52972975 +3022 chr4 + 190214555 8918844 8918843 8918924 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -48453185 -45777217 +3079 chr4 + 190214555 8918854 8918853 8918950 97 CCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTT chr4 + 94230402 48601703 48601702 48601799 48601703 48601702 48601799 97 CTTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTTTT .:..:....x.:.:..xx...:.:.xx....:.:....::.:.x.:.xxxx.x........:...:..:..x:...:.....:x:.::..x.:::.. 97M 59/97 60.8% 97/94230402 0.0% 0/97 0.0% -39682849 -54547553 +3246 chr4 + 190214555 8918880 8918879 8918974 95 TTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTTT chr4 + 94230402 49829835 49829834 49829928 49829835 49829834 49829928 94 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCC--CCCTCCCTCACACACACACTTTGTTTTTT ..:.x..:.:.x.xx...x:...:x::.-...........:...........:....:...::..--....:...:x.x..:x.x::..x..:... 28M1I36M2D29M 64/93 68.8% 94/94230402 0.0% 3/93 3.2% -40910955 -53319447 +3766 chr4 + 190214555 8918880 8918879 8919066 187 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTTCTTTCTTCTTTCTTTCCCTC-----------------CCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCT chr4 + 94230402 67728277 67728276 67728480 67728277 67728276 67728480 204 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCT .....x:..x....:....xx:.::..:x.......x.x...x:x:..:.:...:..:..:.x.::..:.::.x.x:.:x.:.:.x:::x...x.:x:.x::::.x:.x.....::xx.:x::...::xxx.......:..x.:..:...x..-----------------........xx:......:.:..:x.:.x.:.:.. 153M17I34M 106/187 56.7% 204/94230402 0.0% 17/187 9.1% -58809397 -35421005 +3589 chr4 + 190214555 8918884 8918883 8919128 245 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTTCTTTCTTCTTTCTTTCCCTCCCTCCCT--------TCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTTTCT---TTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTT chr4 + 94230402 67728277 67728276 67728532 67728277 67728276 67728532 256 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCT .....x:..x....:....xx:.::..:x.......x.x...x.x:..:.:...::.:..x.x.x::.:.:..x:...::..::.x:.:x...x.:x..x::::.x:.x...x.::xx.:x::...:::xx.....:::..x.:.:....x..x.:--------...xx:.:.:.::.xx..:..:...:..:x.::x::..:.:..---:.x..:...xx:..::.x.:xx:......x.x:..:.x.x::..:. 156M8I43M3I46M 130/245 53.1% 256/94230402 0.0% 11/245 4.5% -58809393 -35421009 +3075 chr4 + 190214555 8918898 8918897 8918990 93 TCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTTTCTTTCTCTTTCTTTCT chr4 + 94230402 4550085 4550084 4550177 4550085 4550084 4550177 93 TCTTCCCTCTGTGCTTTCCCTCTTTCTTCTTTCCTCCTCAGCTAATGTTGGGATTTTTTTTGTTGGCTTTTTTTTTTTTTGGCCTTTCTTTCT ....:.:.::x.x.....::.............:.:..:xx..xx:..:xxxx::...:.::..xx::.....:...:..xx:.......... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 4368813 NA +3888 chr4 + 190214555 8918922 8918921 8919173 252 TCTTCTTTCTTTCTTTCCTTCCGTCCCTTCCTTTCTCATTCTTCTTTTTCTT-----TCTTTCTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTTCTTTCTTCTTTCTTTCCCTCCCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTC----CTTCTTT---CTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215305 19215304 19215566 19215305 19215304 19215566 262 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCC--CCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .::...x:...:..:..:x.:x..xxx..::.x.:.:...:.::.x..xx..-----.x..:.x.....x.::...xx:.:x.x..:x..x..x::.x:xx::.:::.:.:...:...--....::..::...:.xx....xx:xx......x..::...x......xxx....x.x....::xx:.::..::.x:..::...x:.x.:...:----.....:.---....:....x:...x:x..:..::x.:..:.x.:... 52M5I61M2D93M4I7M3I37M 142/250 56.8% 262/94230402 0.0% 14/250 5.6% -10296383 -83934019 +3754 chr4 + 190214555 8918940 8918939 8919189 250 TTCCGTCCCTTCCTTTCT-------CATTCTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTTCTTTCTTCTTT----------CTTTCCCTCCCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215305 19215304 19215566 19215305 19215304 19215566 262 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAG---CTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTC--TCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...:x.x.......:...-------x...:..x....x:......x:.xx..x.xxx.x.::::...x.x.x:..xxx:x:x....:.:.x----------.:::...::..:...::....::...:.:...xx.:::xx:xx......x..::...x......xxx....x:x....::xx---.......:.x.......:x:.x.:....xxxx....--....xx:..:.....x:...x:x..:..::x.:..:.x.:... 18M7I66M10I82M3D36M2D43M 145/245 59.2% 262/94230402 0.0% 22/245 9.0% -10296365 -83934037 +3389 chr4 + 190214555 8919038 8919037 8919154 117 CTTCCTTCCTTTCTCTTTC------TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCT---TTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTT---TCTTTCTTCCTTTTTATTT ...:x.....:..::..:.------........:....:.:x..::.:.x....xx.....x.::.---:::..x....:::x.xx.....:...::.:..:..---.........:..:..x:.. 19M6I41M3I35M3D19M 76/114 66.7% 123/94230402 0.0% 12/114 10.5% -54778079 -39452323 +3429 chr4 + 190214555 8919078 8919077 8919169 92 TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCT---TTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x..:x::x::.:.x.......xx..::........:......x.:.xx..---.....x.x.:.....x.....::..::.:...... 57M3I35M 63/92 68.5% 95/94230402 0.0% 3/92 3.3% -74407856 -19822546 +3154 chr4 + 190214555 8919080 8919079 8919161 82 TCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 38895910 38895909 38895991 38895910 38895909 38895991 82 TCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCT ...:.:..:.:.:x.x.:::x...:...::.:......x.x....:........:..x.x.x..x:....::..::::.... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% -29976830 -64253572 +3029 chr4 + 190214555 8919082 8919081 8919190 109 TTTCTTTCT--TTCTTCT---------TTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 49829809 49829808 49829928 49829809 49829808 49829928 120 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT .....:...--..:....---------.:.x..:.:.x:xx...x:....x.::x:...:......:...........:....:..:::.:::..::..:x.x:x.x:x....x...:.. 9M2I7M9I93M 70/109 64.2% 120/94230402 0.0% 11/109 10.1% -40910727 -53319675 +3011 chr4 + 190214555 8919098 8919097 8919144 47 TTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTC chr4 + 94230402 11806873 11806872 11806919 11806873 11806872 11806919 47 TTTTGTCATTCCTTCTTTTTTTTTTTTCCCTCCTTCTTTATTTCTCC ..:.x..x..........:.....:..:.:.........x.....:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -2887775 -91342627 +3443 chr4 + 190214555 8919120 8919119 8919241 122 TTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTTTCTTTCTCTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x...:..::::..:.xx.x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.::.....:.::::....x.....:....:.x.:. 122M 71/122 58.2% 122/94230402 0.0% 0/122 0.0% -54777998 -39452404 +3639 chr4 + 190214555 8919122 8919121 8919245 124 CTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTTTCTTTCTCTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCT-CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.....-..:::..:.xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx:..:......:.:.::x.........:..:.:.x... 10M1D113M 76/123 61.8% 123/94230402 0.0% 1/123 0.8% -54777995 -39452407 +3013 chr4 + 190214555 8919130 8919129 8919214 85 CTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ...:..::......x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x::.... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% -48452896 -45777506 +3831 chr4 + 190214555 8919132 8919131 8919249 118 TCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTTTCTTTCTCTCTCTTTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.x.:::...:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:....x.xx...:.....::.x.::.........::..:...x... 64M4I54M 75/118 63.6% 122/94230402 0.0% 4/118 3.4% -54777986 -39452416 +3098 chr4 + 190214555 8919139 8919138 8919230 92 TTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTT chr4 + 94230402 57372027 57372026 57372118 57372027 57372026 57372118 92 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTT ..:......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x:.xx..x.:...:x:...x.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% -48452888 -45777514 +3182 chr4 + 190214555 8931456 8931455 8931527 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTTTGAACCCGGCAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx::........:.x..x.xx:.x:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -67101750 -27128652 +3107 chr4 + 190214555 8937529 8937528 8937586 58 AGATGTAGAAAAAATTAAGTTGCAAAAAAAAAAAAAAAAAAGAGAGAGAGACAGAAAA chr4 + 94230402 37997892 37997891 37997949 37997892 37997891 37997949 58 AAATGCACAAAAATTTTGATTACATTAAAAAAAAAAAAAAAGAGAGAGAGAGAAATAA .:...:.x.....x..x::..:..xx.........................x.:.x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -29060363 -65170039 +4062 chr4 + 190214555 8941204 8941203 8941321 118 CCCGTCTTCCCATCACCCATCTCTTTCCTCT-TCCTGTCCTCTTCTCACCTCTTCTTGCCTCCCCTCCCCCTTTCCCCCCTTCTTCCCCTCTCCTCCCTCAATTTCTCCTTCCTTCCTC chr4 + 94230402 93982388 93982387 93982506 93982388 93982387 93982506 119 CTTGTCTTCCCCACATCAACCACTATCCTTTCTGTTGTCTATAGCTCACTTTTACTGCTTTCACATTTCCCCCCCCCCCCCTTTTTTTTCCTCTTCCCTTAACTTCTCCTTCCCTTTTC .::........xx..:.x.:.x..x....:.-.x:....:x:xx.....:.:.x..xx::..x.x.::...:::......:.:..:::::...:.....:..:..........:.::.. 31M1I87M 74/118 62.7% 119/94230402 0.0% 1/118 0.8% -85041184 -9189218 +3050 chr4 + 190214555 8954380 8954379 8954437 58 AAAACAAAACAAAGTCAAACGAACAAACAAAACCAAAAAACAAACAAACAAAAAAACA chr4 + 94230402 4923536 4923535 4923593 4923536 4923535 4923593 58 AAAACAAACAAAAGTCAAACAAACAAAAAGAACCAGGAGAGCCACAAACAGTAAAATA ........xx..........:......x.:.....::.:.xxx.......:x....:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 4030844 NA +3157 chr4 + 190214555 8997822 8997821 8997863 42 CTTGCTTTTTTGTTTGTTTGTTTGTTTGTTTTGGTTTGTTTT chr4 + 94230402 55690041 55690040 55690082 55690041 55690040 55690082 42 CTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT ....x......x........:............x........ 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -46692219 -47538183 +3008 chr4 + 190214555 9007094 9007093 9007164 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACGTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x.::......x::.:..x:xx:..:..:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -67026113 -27204289 +3551 chr4 + 190214555 9010686 9010685 9010764 79 GTGGTGCGTGCCTGTAATCCTAGTTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGAGCAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--....:.:.:..:..:...::........x.xx.x...x................xxx::..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -67022515 -27207887 +3083 chr4 + 190214555 9017472 9017471 9017523 52 TGAAAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAAGTTAACACTTC chr4 + 94230402 11100259 11100258 11100310 11100259 11100258 11100310 52 TGAAAGCAGACAAAAAAAAAAAAAGAAGAATTAAGGACAAAATTAAGACTTC .....:....x.............:..:..xx..:::....:....x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -2082787 -92147615 +3597 chr4 + 190214555 9028066 9028065 9028148 83 CATGGTGGCATGCATATGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATTGCTTGAACCCAAAAGGCAGGTGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--....::......:...........::.:......x.xx.x...x::..........:...x:xx.x.:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -67005131 -27225271 +18759 chr4 + 190214555 9030451 9030450 9030847 397 AAATTGCATCTGATGGTCTCAAGAGTCTTGTGTTTGAAGTGAGTCTGGCTGATTTGCAAAATGATAAAGTTGCATTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAGGGCAAAAACTGCCTGACTAACTTCTATGGCATGGGTCTTACCTGTGACAAAATATGTTCCATGGTTGAAAAATG-----------------------------------TTC----------------------------------------------------------------------------------------------------------------------------AACAATGATTGAAGCTCATGTTGATGTCAAGACTACCGATGGTTACTTCTTTCATCTGTTTTGTGTTGGTTTTACCAAAAAACACAACAATCAGATACAGAAGACCTCTTATGCTCAGCACAAACA-GTCCCCCAAATCCAGAAGAAGATGATGGAAATCATGACCTGAGAGGTGCAGACAAATGACTTGAAAGAAGTGGTCAATAAATTG chr4 + 94230402 34370189 34370188 34370745 34370189 34370188 34370745 557 AAATTGCCTCTGATGGCTTGAAGGGTCGTGTATTTGAAGTGAGTCTGGCTGATCTGCAGAACGATGAGGTTGCCTTCCGTAAATTTAAGCTGATAACTGAGGACGTTCAGGGGAAAAATTGTCTGACCAACTTCCATGGAATGGACCTCACCCGCGACAAAATGTGTTCCATGGTGAAGAAGTGGCAGGTGTGTAAAGAACAAGGTCTGCGTTACTGCTTTCCTCTTTAGGAAAGGAAGTGGCTACTGGTGTGCCCTAAAGCTGTTTCTGATGGTATTGGCGGATATTAATGAATGTCAGGTGCACGTCTGGGAGGCCTGTCATGGGCATAACTGTTTCTTTTCCAGACGATGATTGAAGCCCACGTGGATGTCAAAACTACGGATGGTTACCTACTGCGCCTCTTCTGTGTGGGTTTCACAAAGAAGCGTAATAACCAAATCCGCAAGACCTCGTATGCCCAGCATCAGCAGGTTCGGCAGATTCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTCCAGACCAATGACCTGAAAGAAGTTGTCAATAAGCTG .......x........::.x...:...x...:.....................:....:..:...:.:.....x..:x.x.....:........x.....:..:........x.....:..:.....:......:....x....::..:...:.:........:...........x:.:..:..-----------------------------------...----------------------------------------------------------------------------------------------------------------------------:..:...........:..:..x........:.....x.........:.x:.x.::..x..:.....x.....:..x..:..:.::..:..:..:..x.:x........x.....:.....:x.:..-..:.xx..:..:.:x........................:.......x.....x......:..........x........::.. 184M35I3M124I126M1I84M 314/397 79.1% 557/94230402 0.0% 160/397 40.3% -25339738 -68890664 +6562 chr4 + 190214555 9030956 9030955 9031119 164 ATGGAGCTTCGTGGTGACGGTAGTAGTTCTGGAAAACCCACTAGGGACGAGAGACATGCTAAAGTTGAATGAGCTGATGGATATGAACCACCAGTCCAAGAATCTGTTTAAAGTTCAGACTTAGTAGCAAATAAGAAGTCCTATTTGTGAAAAACAAACAAGAA chr4 + 94230402 34371982 34371981 34372136 34371982 34371981 34372136 155 ATGGAACTGCACGGTGAAGGTGGCGGTGCTGGAAAACCTTCTGGGGATGAGGCAGGTGCGAAAGTAGAGCGAGCTGATGGATACGAGCCGCCTGTGCAAGAGTCTGTCTGAAACTAAATATTGACCAAAAATAA-AAGTTTTATT--------ACACACGAGAA .....:..x.::.....x...:.::..x..........:x..:....:...:x.x:...x.....x..::.............:..:..:..x..x.....:.....:.:..::.x.:xx..:::x:x......-....::....--------...x..:.... 134M1D10M8D11M 110/155 71.0% 155/94230402 0.0% 9/155 5.8% -25341026 -68889376 +3021 chr4 + 190214555 9040781 9040780 9040863 83 TACACGTGTATATACGTATATATACGTGCATATATACGTATATATACGTGTATATATACATATATATACATATATACATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:x.:.x.:.:.x:..:.:.:.::...::...xx.:...x::....:.:.:..x......:.x...:..:.:.....:.:.. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% -76793752 -17436650 +3230 chr4 + 190214555 9041022 9041021 9041137 116 ATATATACATATATACGTATACATATATACGTGTATATATACATATATACGTGTATATATACATATATACGTATATATATACGTGTATATATACATATATACGTATATATATACGT chr4 + 94230402 76376858 76376857 76376972 76376858 76376857 76376972 115 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA-GAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ..::....x.x.x...:...:..x.x....:.....::.....x.xx...x...:....:.:..:.::.::..x.:.x...-.x.x.x..:.:.x.x.x.::..::x.:.x...:. 81M1D34M 72/115 62.6% 115/94230402 0.0% 1/115 0.9% -67335836 -26894566 +3093 chr4 + 190214555 9041049 9041048 9041178 130 TACGTGTATATATACATATATACGTGTATATATACATATATACGTATATATATACGTGTATATATACATATATACGTATATATATACGTGTATATATACATACATACGTATATATATACGTGTATATATA chr4 + 94230402 91734567 91734566 91734696 91734567 91734566 91734696 130 TATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATA ..:.x.x::.....x....:.x:x:x...:xxx:......x.::.:.x.x:x..:.x:xx.....x:..::...:....xx...x.x:x..x..:.x.x........:x.x.:......:..x:...... 130M 78/130 60.0% 130/94230402 0.0% 0/130 0.0% -82693518 -11536884 +3024 chr4 + 190214555 9041071 9041070 9041133 63 CGTGTATATATACATATATACGTATATATATACGTGTATATATACATATATACGTATATATAT chr4 + 94230402 86633928 86633927 86633990 86633928 86633927 86633990 63 CGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ....::.:::..x:.....::x.:....:..:.....:.........x.:..:.:..x.:... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -77592857 -16637545 +3345 chr4 + 190214555 9041183 9041182 9041292 110 TATACATATATACGTATATGTATACATATATATACACATATATATACATATATACGTATATGTATACATATATATACACATATATACATATATACGTATATGTATACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTAT--GTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .......:.:.::x.x.:..x::::..x.....::..x:.:......x::.:...x....:....--:..:x:..:.x:x.:.:..:..:.:..:.x.....:..:..:. 65M2D43M 66/108 61.1% 108/94230402 0.0% 2/108 1.9% -12068011 -82162391 +3392 chr4 + 190214555 9041198 9041197 9041320 123 ATATGTATACATATATATACACATATATATACATATATACGTATATGTATACATATATATACACATATATACATATATACGTATATGTATACATATATATACACATATATATACATATATATG chr4 + 94230402 25906335 25906334 25906457 25906335 25906334 25906457 123 ATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACG ....x:.x....:x....x.x....xx:.x.x...:x.x:.xx.x.x.x.......x.:.x::....:..::.x.::.:.::.:x.x...x........x......::x........xx..:. 123M 77/123 62.6% 123/94230402 0.0% 0/123 0.0% -16865137 -77365265 +3236 chr4 + 190214555 9043398 9043397 9043454 57 TTTCATTTCTGATTGTATTTATTTGGGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 46198796 46198795 46198852 46198796 46198795 46198852 57 TTGTGTTTATAATTGCATTTGTCCGGGCTTCTTTTTTTTTCTTTTCTCTTTTTTCTT ..x::...x.:....:....:.::...::...........:....:.:......:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -37155398 -57075004 +3145 chr4 + 190214555 9056857 9056856 9056913 57 GATTCCATCTCAAAAAAAAAACAAAAAAACAAAAAACACACACACACACACACACAA chr4 + 94230402 32782394 32782393 32782450 32782394 32782393 32782450 57 GATCTTATATTAAAAAACAAACAAACAAACAAAAAACTCGCATGCATGCACAAACAA ...:::..x.:......x.......x...........x.:..::..::....x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -23725537 -70504865 +3182 chr4 + 190214555 9056868 9056867 9056922 55 AAAAAAAAAACAAAAAAACAAAAAACACACACACACACACACACAAACCAAAACT chr4 + 94230402 45036940 45036939 45036994 45036940 45036939 45036994 55 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAACT ..........xx.....x.........:.x.x.:...........x.xx...... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -35980072 -58250330 +3619 chr4 + 190214555 9060591 9060590 9060649 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.............:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -66972615 -27257787 +3820 chr4 + 190214555 9087857 9087856 9087939 83 CATGATGGTGCACGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::.........--....:.:...........::.:......x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -66945340 -27285062 +3192 chr4 + 190214555 9089914 9089913 9089996 83 CATGGTGGTAGCCGCCTACAGTCCCAGCTACTCAAGAGGCTGAAGCAGGAGGGTCGCTTGAGTCCAGAAGATCAAGGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:--.:.x.::...:.........::.:.......:x.xx.x.::x.:.....::.......x.:x:......:. 10M2D71M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -66943283 -27287119 +3993 chr4 + 190214555 9102163 9102162 9102376 214 AAGAATGTCAACATTTACACTGACTCTCAATATGCCTTTTTAACCCTTCTAGTGCATGGAACATTATATAAAGAAAAGGGCCTACTGAACCCTGGGGGAAAAGACATAAAATATCAACAAGAAATCTTGCGATTATTAAAAGCCGTATGGAGACCCCACAAGGTGGCAGTTATGCATTGCAGGGGACATCAGCAAGCTTCCACCTTGGTGGGTT chr4 + 94230402 48647192 48647191 48647405 48647192 48647191 48647405 214 AAAAGAGTCAATATATGGAATGATTCAAAATTTGCATTTGGAGTTGTACATTGCCATGGAGTAACATGGAAGGAAAGAGGACTGCTATCCTACCAGGGATCACAAATAAAATATGGACCCATTATTATAGAGTTACTGGAAAGTGTACAGCCTCCTCAGAAAGTAGCCATGATGCATCGCAAGGCACATCAGTTCAGTAACACTCCAGTGAATT ..:.:x.....:..x.:x.x...:..xx...x...x...xx.:::x.x.xxxxx......::.x:..:x..:....::..x..:..:xx.:x:x:....xx.x.x.........x:..xx:xx..:x.:x::...:.::..:x:...::.xxx..:..x..:..:..x:.x......:...:..x.......:xx:x.xx...::::...::.. 214M 119/214 55.6% 214/94230402 0.0% 0/214 0.0% -39545029 -54685373 +3650 chr4 + 190214555 9117291 9117290 9117351 61 GTGCACCTGTAATCCCAGCTACTTCGGAGGCTGAGGCTGAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:..........x::........x.:x:x...x.............:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -66915913 -27314489 +3735 chr4 + 190214555 9117977 9117976 9118072 96 GTTGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCAGTTGAACCCTGGAGGCAGAGGTTGCAGTGAGCCAAGATTGTGCCAA chr4 + 94230402 76033201 76033200 76033290 76033201 76033200 76033290 90 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ..x......x....:.:...........::........x.xx.x...x..x........x.:..x:xx:..:..:..------..x..x:...... 77M6D13M 66/90 73.3% 90/94230402 0.0% 6/90 6.7% -66915224 -27315178 +3237 chr4 + 190214555 9120786 9120785 9120871 86 CACCTGTAATCCCAGCACTTTGGAAGGCTGAGGCAGGTGGATCACTTGAGCCCAGGAGTTCAAGACCAGGCCTGGCCAACATGGTG chr4 + 94230402 76033207 76033206 76033286 76033207 76033206 76033286 80 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT------TTGGGCTGTAGAACATGATG ...x....:.:.....xx:...:.........x.xx...:.x.......:.....:..:.------:x..x...xxx......:.. 60M6D20M 58/80 72.5% 80/94230402 0.0% 6/80 7.5% -66912421 -27317981 +4163 chr4 + 190214555 9140447 9140446 9140586 140 TATACATATATATGTATATATGTATGTGTATATATACACATATATACATGTATGTGTATATATACACATATATACATGTATGTGTATATATGTATACATATGCACATATATATACATGTACATGTGTATGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATAC----TCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA .......:.:.:.x.x.:.:x.::.:.x.....:...x..:......----x:.....:x.....::..:..:x....:x.x...:.......:..::x..:::...::.:.::x:xx....-..x.x....x.....:. 47M4D71M1D17M 87/135 64.4% 135/94230402 0.0% 5/135 3.7% -11968747 -82261655 +3258 chr4 + 190214555 9140471 9140470 9140590 120 TGTGTATATATACACATATATACATGTATGTGTATATATACACATATATACATGTATGTGTATATATGTATACATATGCACATATATATACATGTACATGTGTATGTGTGTGTATATATA chr4 + 94230402 21109190 21109189 21109301 21109190 21109189 21109301 112 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCG--------TGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:x....:..:::::.x.x.:::x.::.:.x.....:...x..:......x:.--------.:..:x.....:....:..x:..::x.x::....:.........x:.:..:..::.:. 54M8D58M 68/112 60.7% 112/94230402 0.0% 8/112 7.1% -11968719 -82261683 +3513 chr4 + 190214555 9140491 9140490 9140673 183 TACATGTATGTGTATAT---ATACACATATATACATGTATGTGTATATATGT--ATACATATGCACATATATATACATGTACATGTGTATGTGTGTGTATATATATATATGTGTATATATATAAAAAACACACATGCACAA-------------ATTCACCACCAACAACT----CAGAAATTACCGTCTCCTTCTATTCTAAGG chr4 + 94230402 89812949 89812948 89813153 89812949 89812948 89813153 205 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTAAGAAAAATGAATCAGTATTTTTCGTCAAAAAGTTTTCCAGACATCACAGTTTACTACAGTCCTGAGG ..:....xx....x.:.---...:.x...x...::.....:.x..x..::x.--......:....x.:x:x:..:.:.:.::x:x...:...............:.x..x:.x.xx.xx.x.x.x:....x:....:.x:.-------------...:x:.::...x..x.----....x..:..x..:.x..x.x:.:..:... 17M3I32M2I87M13I17M4I30M 116/183 63.4% 205/94230402 0.0% 22/183 12.0% -80672458 -13557944 +3131 chr4 + 190214555 9140526 9140525 9140591 66 ATGTGTATATATGTATACATATGCACATATATATACATGTACATGTGTATGTGTGTGTATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:....:xx........:x..x..x..x....:::...:::.:...:.....::...:...... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -18184965 -76045437 +3016 chr4 + 190214555 9150319 9150318 9150379 61 GTGTGCCTGTAGTCCCAGCTACTCGAGATGCTGAGGCAGGAGAATCGCTGGAGCCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:.........:..:.x......x.xx.x...x.:..x..:...:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -66882885 -27347517 +3064 chr4 + 190214555 9171045 9171044 9171102 58 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA chr4 + 94230402 76033201 76033200 76033256 76033201 76033200 76033256 56 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAA ......--...x......:.........:.::........x.x..x...x::...... 6M2D50M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% -66862156 -27368246 +3054 chr4 + 190214555 9171167 9171166 9171223 57 ACTTTGTCTCAACAAAAAAAAAAAAAAAAAAAAAAAAAATAGACACCAATGACGAAA chr4 + 94230402 36350023 36350022 36350079 36350023 36350022 36350079 57 ACTTTCTATCAACATAAAAGGAAAAGAAAAAAAAAAAAACAAACACAACTTACTGAA .....x.x......x....::....:.............:.:....x.x.x..x:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -27178856 -67051546 +3082 chr4 + 190214555 9193668 9193667 9193796 129 AAGAAAAGAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA chr4 + 94230402 54011595 54011594 54011723 54011595 54011594 54011723 129 AAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ..:....:.x........x....x.:..:....:x.xxxx.:..x:x.:x......:.:x::...x.xx.:.:xxx..:...:xxx:x.:x.x:..:.:....x....:.x:...:..:...:....:. 129M 76/129 58.9% 129/94230402 0.0% 0/129 0.0% -44817927 -49412475 +3450 chr4 + 190214555 9193704 9193703 9193831 128 AGAAGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGCATTAAAGCATTAGTGAG chr4 + 94230402 89498607 89498606 89498734 89498607 89498606 89498734 128 AGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGATTAATTAGAGTCTTACAGAG ..:.::.:.:.x....:.:..x...:.x:x:::..:.xx..::.:..x..:..:x...x.::..::..:x::.x...x........:.:....x..:x...::.:.:.xxx....:..:x...xx... 128M 74/128 57.8% 128/94230402 0.0% 0/128 0.0% -80304903 -13925499 +3180 chr4 + 190214555 9193707 9193706 9193812 106 AGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAA chr4 + 94230402 81202744 81202743 81202849 81202744 81202743 81202849 106 AGGGGACAAGGAAAGGAAGAGTAAAAGCAAGTCAAGCTGGGGGTCAAGATAAAAATCATTTAATAAACAAAGGAGAAGCAGAAGAGAGGAAAAAAAAAAAAAAAAA ...::.x........:....:x:...:x..:xx...xx:.:::xx....x.:...xx.xxx..x...x....:.::.:x::....:.:....:...:....:.... 106M 65/106 61.3% 106/94230402 0.0% 0/106 0.0% -72009037 -22221365 +3147 chr4 + 190214555 9197476 9197475 9197516 41 GAAGCCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAA chr4 + 94230402 75300451 75300450 75300491 75300451 75300450 75300491 41 GGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .:.x.x.................:................. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -66102975 -28127427 +3038 chr4 + 190214555 9197480 9197479 9197550 71 CCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGTGAAAGAAAAAAAAAATAGCCATATAG chr4 + 94230402 44890389 44890388 44890459 44890389 44890388 44890459 71 CCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGCTAAACCAAATAG ...x..::.........................:::...:.x.xxxx..:..:...x:xxx.:...x.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -35692909 -58537493 +3138 chr4 + 190214555 9197486 9197485 9197556 71 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGTGAAAGAAAAA-AAAAATAGCCATAT-----AGAAAAAA chr4 + 94230402 46677676 46677675 46677752 46677676 46677675 46677752 77 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAAAGAA ...............:.............:x:.x.xx...:.......x-.:.:....xx..:.-----.....:.. 49M1I14M5I8M 56/71 78.9% 77/94230402 0.0% 6/71 8.5% -37480190 -56750212 +3017 chr4 + 190214555 9376725 9376724 9376783 59 TCATTCTCAGTCTTCTCCTGCCCATCCAAAGTGAAACTCACCAATACAGGCATACCCTG chr4 + 94230402 62492130 62492129 62492188 62492130 62492129 62492188 59 TCATTCCTTGTTTTCTCCTGCCCACCTAAAGTGGAAGTTTACAAGACATGAATACACTG ......::x..:............:.:......:..x.:xx...x...x.x....x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -53115405 -41114997 +3561 chr4 + 190214555 9403570 9403569 9403655 86 TCTTGTTTTCTGGAGGTTTTATGTTTTCTTTTTTCTCTCTCCCTCTCCCTGTCTCCCTGTCTCCCTTTCCCTCTCTCCATTTTTCT chr4 + 94230402 14674425 14674424 14674499 14674425 14674424 14674499 75 TCTTACATTCTAAAGCACTTTTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCCCCCCAT-----------TCCCTCAATTTTTCT ....::x....::..xx:..x.x....:.:.....................:.:...::.-----------..:...x........ 60M11D15M 57/75 76.0% 75/94230402 0.0% 11/75 14.7% -5270855 -88959547 +3067 chr4 + 190214555 9464003 9464002 9464091 89 AAACTCCATGGAAACACAAAACAAAACAAAGTCAAACGAACAAACAAAAAACAAAAAAACAAAAAAAAAAACAGAGAGGCACTTCTGAC chr4 + 94230402 58504529 58504528 58504617 58504529 58504528 58504617 89 AAACACTACTGGTACATCTCATAATAAAAAATCCTTTGGGGAAAAAAAAAACAAAAAAACAAAAACAAAACCACAAAGGCAGCCTTGAC ....x.:.:x.:x...:xxx.:..x.x...:..xxx:.::x...x....................x....x..x.:.....x:::.... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% -49040526 -45189876 +3391 chr4 + 190214555 9497125 9497124 9497198 74 GCGTGCGTGTAGTTCCAGCTGCTTGGGAGACTGAGGTGGGAGGATGGCTTGAGCCTGGAAGATTGAGGCTGAAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::...............:....::..:.....x:xx.x.:.xx:.....:..::....x..x:.....x.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -66536079 -27694323 +3374 chr4 + 190214555 9517669 9517668 9517720 52 AAGTCAAACGAACAAACAAACAAAAAACAAACCAAAAAAAAAAAAAAAACAG chr4 + 94230402 71156596 71156595 71156647 71156596 71156595 71156647 52 AGGTTAAAAAAACAAACAAACAAAACACAAAACAAAACAGAAAAAAGAACAG .:..:...x:...............x.....x.....x.:......:..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -61638927 -32591475 +3512 chr4 + 190214555 9541383 9541382 9541458 76 TGGTGACACCTATAATCCCAGCTACTTGGGAAGCTGAGCCACGAGAATTGCTTGAACACAGAAGGTGGAGGTTGCA chr4 + 94230402 76033202 76033201 76033276 76033202 76033201 76033276 75 TGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....-...x.:..:.:...........::.:........x:.x...x::.......x......x.xx:..:..:. 5M1D70M 55/75 73.3% 75/94230402 0.0% 1/75 1.3% -66491819 -27738583 +3252 chr4 + 190214555 9541504 9541503 9541570 67 AACATTCCAACTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGTCAGAACAAGAGGAGGAG chr4 + 94230402 29330384 29330383 29330450 29330384 29330383 29330450 67 AATATTACAACTCAGAACTGGATGAAAAAAAAAATAGAGAAAGAAGAGTTTAAAATAAGTGGAAGAG ..:...x.......:..xx::.x:..........x...:......:.:x.:.:..:...x...:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -19788880 -74441522 +3045 chr4 + 190214555 9549207 9549206 9549255 49 AAACAAGAAACAAACAAACAAAAAAAAACTCAAAAAAGCAGCCCTGACC chr4 + 94230402 58504570 58504569 58504618 58504570 58504569 58504618 49 AAAAAAAAAACAAAAAAACAAAAACAAAACCACAAAGGCAGCCTTGACC ...x..:.......x.........x...x:..x...:......:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -48955363 -45275039 +3112 chr4 + 190214555 9559531 9559530 9559575 45 TGTGTTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTTG chr4 + 94230402 56244314 56244313 56244358 56244314 56244313 56244358 45 TGTTTTTTGTTGTTGCTGTTGTTTTGTTTGTTTGCTTGTTTTTTG ...x....x......:....xx............:.......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -46684783 -47545619 +3572 chr4 + 190214555 9560954 9560953 9561013 60 TGCACATGTAGTCCCAGCTACTTGTGAAGCTGAGGCAGGAGAATCGCTTAAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:......:...........x:.:......x.xx.x...x.:...:.......:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -66472251 -27758151 +17837 chr4 + 190214555 9563336 9563335 9563731 396 AAATTGCATCTGATGGTCTCAAGGGTCTTGCGTTTGAAGTGAGTCTTGCTGATTCGCAGAATGATGAAGTTGCATTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAGGGCAAAAACTGCCTGACTAACTTCTATGGCATGGGTCTTACCTGTGACAAAATATGTTCCATGGTTGAAAAATG-----------------------------------TTC----------------------------------------------------------------------------------------------------------------------------AACAATGACTGAAGCTCATGTTGATGTCAAGACTACCGATGGTTATTTCTTTCATCTGTTTTGTGTTGGTTTTACTAAAAAACACAACAATCAGATACTGAAGACCTCTTATGCTCAGCACCAACA-GTCCCCCAAATCCAGAAGAAGATGATGGAAATCATGACCTGAGAGGTGC-GGCAAATGACTTGAAAGAAGTGGTCAATAAAATG chr4 + 94230402 34370189 34370188 34370745 34370189 34370188 34370745 557 AAATTGCCTCTGATGGCTTGAAGGGTCGTGTATTTGAAGTGAGTCTGGCTGATCTGCAGAACGATGAGGTTGCCTTCCGTAAATTTAAGCTGATAACTGAGGACGTTCAGGGGAAAAATTGTCTGACCAACTTCCATGGAATGGACCTCACCCGCGACAAAATGTGTTCCATGGTGAAGAAGTGGCAGGTGTGTAAAGAACAAGGTCTGCGTTACTGCTTTCCTCTTTAGGAAAGGAAGTGGCTACTGGTGTGCCCTAAAGCTGTTTCTGATGGTATTGGCGGATATTAATGAATGTCAGGTGCACGTCTGGGAGGCCTGTCATGGGCATAACTGTTTCTTTTCCAGACGATGATTGAAGCCCACGTGGATGTCAAAACTACGGATGGTTACCTACTGCGCCTCTTCTGTGTGGGTTTCACAAAGAAGCGTAATAACCAAATCCGCAAGACCTCGTATGCCCAGCATCAGCAGGTTCGGCAGATTCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTCCAGACCAATGACCTGAAAGAAGTTGTCAATAAGCTG .......x........::.x.......x..::..............x......::......:.....:.....x..:x.x.....:........x.....:..:........x.....:..:.....:......:....x....::..:...:.:........:...........x:.:..:..-----------------------------------...----------------------------------------------------------------------------------------------------------------------------:..:....:......:..:..x........:.....x........::.x:.x.::..x..:.....x.....:..x..:..:.::..:..:..:..x.xx........x.....:.....:..:..-..:.xx..:..:.:x........................:.......x.-.:.x......:..........x........:x.. 184M35I3M124I126M1I49M1I34M 311/396 78.5% 557/94230402 0.0% 161/396 40.7% -24806853 -69423549 +6904 chr4 + 190214555 9563840 9563839 9564008 169 ATGGAGCTTCGTGGTGACGGTAGTAGTTCTGGAAAACCCCCTAGGGACGAGATACATGCTAAAGTTGAATGAGCTGATGGATATGAACCACCTGTCCAAGAATCTGTTTAAAGTTCAGACTTAAAACAGTGGCAAATA--AAAAGTCCTATTTGTGAAAAACAAACAAGAA chr4 + 94230402 34371982 34371981 34372136 34371982 34371981 34372136 155 ATGGAACTGCACGGTGAAGGTGGCGGTGCTGGAAAACCTTCTGGGGATGAGGCAGGTGCGAAAGTAGAGCGAGCTGATGGATACGAGCCGCCTGTGCAAGAGTCTGTCTGAAACT--------AAATATTGACCAAAAATAAAAGTTTTATT--------ACACACGAGAA .....:..x.::.....x...:.::..x..........::..:....:...::.x:...x.....x..::.............:..:..:.....x.....:.....:.:..::.--------...:.x..:.x..x.--......::....--------...x..:.... 115M8D15M2I12M8D11M 114/153 74.5% 155/94230402 0.0% 18/153 11.8% -24808142 -69422260 +3017 chr4 + 190214555 9573464 9573463 9573502 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -15219162 -79011240 +3114 chr4 + 190214555 9575508 9575507 9575564 57 TTTCATTTCTGATTGTATTTATTTGGGTCTCCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 46198796 46198795 46198852 46198796 46198795 46198852 57 TTGTGTTTATAATTGCATTTGTCCGGGCTTCTTTTTTTTTCTTTTCTCTTTTTTCTT ..x::...x.:....:....:.::...::..:........:....:.:......:.. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -36623288 -57607114 +3575 chr4 + 190214555 9592716 9592715 9592787 72 GCACCTGTAGTCCCAGCTACTCAGGAGACTGAAGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::..:....:x.xx.x...x.............:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -66440490 -27789912 +3464 chr4 + 190214555 9598836 9598835 9598907 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -66434370 -27796032 +3056 chr4 + 190214555 9623192 9623191 9623248 57 AAATTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAACCCC chr4 + 94230402 7735336 7735335 7735392 7735336 7735335 7735392 57 AAATCTGCTAATAAAAGCAAACAACAAAGACAAAAAGAAAAGAAAACAAACAAACCC ....:.:.x..x....:x...x..x...:.x.....:....:...........x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 1887856 NA +3142 chr4 + 190214555 9623192 9623191 9623242 51 AAATTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAC chr4 + 94230402 31785856 31785855 31785906 31785856 31785855 31785906 51 AGATTTACAAGGAGAAAAAAAAAAAGAAAGAAAAAGGAAGATAAAACTAAC .:........::.:...........:...:.....::..:.x.....x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -22162664 -72067738 +3466 chr4 + 190214555 9623195 9623194 9623271 77 TTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAACCCCATCAACAAGTGGGCAAAGGATAT chr4 + 94230402 34176490 34176489 34176566 34176490 34176489 34176566 77 TTTACAAGAAAAAAAAAAAAAAAACCCAAAACCAAAAAAGAAACACATAAAACCACCACCTTTTGGGGAGGGGAAAT .......:................xxx....xx......:.....x.:..xx...:..x.xxx....x.::...x.. 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% -24553295 -69677107 +3321 chr4 + 190214555 9625693 9625692 9625765 73 TACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGATTTACTTGAACCCAGGAAGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x....:.:...........::........x.xx.x..xx:............:.:x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -66407512 -27822890 +3591 chr4 + 190214555 9632352 9632351 9632457 106 TAAAAATACAATACTTAGCAGGGCATGATGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033184 76033183 76033277 76033184 76033183 76033277 94 TGAAAGGATGATACACAGTGGTGCACG------------TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...:x.::....x:..::.x...:.------------....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 27M12D67M 65/94 69.1% 94/94230402 0.0% 12/94 12.8% -66400832 -27829570 +3042 chr4 + 190214555 9633787 9633786 9633890 104 CTCTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTATTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCAAT chr4 + 94230402 32310639 32310638 32310742 32310639 32310638 32310742 104 CTTTGATTCTATTTTTTTTTCCCTCCATTTTTCTTTTTCTTTTGGAGACATTTTTTTTTTCTCTTCTCCCTGTACCAATTGTTTTATTGTGTTCTCAGCTAAAT ..:..x....x.:...:....::..:x.....:.....:....x.....:xxx...:x:.x.:x.:x...x.xx:x:.x..:xx.:x:...x........x... 104M 65/104 62.5% 104/94230402 0.0% 0/104 0.0% -22676852 -71553550 +3590 chr4 + 190214555 9653578 9653577 9653648 71 ACATGGTGGCATGCACCTGTAATCCCAGCTACTTTGGAGGCCGAGGCTGAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....--.....x....:.:..........x::....:...x.:x:x...x.............:.. 9M2D60M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% -66379618 -27850784 +3006 chr4 + 190214555 9656163 9656162 9656208 46 AAAAAAAAAAGTAAACAAAAAAAAAAAACCATTAAAAATTAGCCAG chr4 + 94230402 33047953 33047952 33047998 33047953 33047952 33047998 46 AAAACAAAAAACAAACAAACAAAAAAAACCATCAGAAATTATTCAG ....x.....::.......x............:.:......x:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -23391790 -70838612 +3065 chr4 + 190214555 9657205 9657204 9657254 50 AAAAAAACACAAAGACAAAACTAAACCAAAAAAAAACCAAAAAAAAAAAC chr4 + 94230402 1580654 1580653 1580703 1580654 1580653 1580703 50 AACACAACACAAAGGAAAAACGAACCAAAAAAAAACCCAAAAAAAAAAAC ..x.x.........:x.....x..x.x........x.............. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 8076551 NA +3595 chr4 + 190214555 9657215 9657214 9657299 85 AAAGACAAAACTAAACCAAAAAAAAACCAAAAAAAAAAACAAAAAAGCTCACACACACACACACACACACACACACACACACACA chr4 + 94230402 78347550 78347549 78347630 78347550 78347549 78347630 81 AAAGAAAAAACCATG----AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x.....:.x:----.....x.x.....x...x..x......:.:x.....xx:...:.:.:.:..............x.. 15M4D66M 61/81 75.3% 81/94230402 0.0% 4/81 4.9% -68690335 -25540067 +3241 chr4 + 190214555 9657232 9657231 9657307 76 AAAAAAAAACCAAAAAAAAAAACAAAAAAGCTCACACACACACACACACACACACACACACACACACACACACACA chr4 + 94230402 78347551 78347550 78347626 78347551 78347550 78347626 76 AAGAAAAAACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACA ..:.........x:.....x.......x.:x:x.x.x.x.x..xx.....xx:...:.:.:.:............. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -68690319 -25540083 +3123 chr4 + 190214555 9657240 9657239 9657286 47 ACCAAAAAAAAAAACAAAAAAGCTCA-CACACACACACACACACACAC chr4 + 94230402 26446825 26446824 26446872 26446825 26446824 26446872 48 ACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACAC ....x..........x.....:.:..-..x.................. 26M1I21M 42/47 89.4% 48/94230402 0.0% 1/47 2.1% -16789585 -77440817 +3899 chr4 + 190214555 9668868 9668867 9668968 101 CATGGTGGCAGGCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCATGAGAATCTCTTGAACCTGGGAGTCAGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:--....x....:.............::........x.x..x...x.x........::.:..::xx:..:..:..------:.x...:..... 9M2D72M6D12M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% -66364329 -27866073 +3066 chr4 + 190214555 9676793 9676792 9676882 90 CACATATATACATGTATATGTATATATGTATATAGACACACATATATACATGTACATGTATATATGTATATGTATATATGTATGTGTGTA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTG--TGTGTGTATATGCATGCACGTA ....x.x..x..x.x.x.:::.:....x:.:..:x.x......::.....x:x.:........x..--.:...:......:...:::... 66M2D22M 59/88 67.0% 88/94230402 0.0% 2/88 2.3% -12923388 -81307014 +3167 chr4 + 190214555 9676793 9676792 9676873 81 CACATATATACATGTATATGTATATATGTATATAGA--------CACACATATATACATGTACATGTATATATGTATATGTATATATGT chr4 + 94230402 29286191 29286190 29286279 29286191 29286190 29286279 89 CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT ..:...:.....:.:.x.x.:.....::x...x.:.--------.x....x.....:.::..:x.....x...x....:....x..... 36M8I45M 58/81 71.6% 89/94230402 0.0% 8/81 9.9% -19609398 -74621004 +3687 chr4 + 190214555 9676826 9676825 9676894 69 AGACACACATATATACATGTA----CATGTATATATGTATATGTATATATGTATGTGTGTATATATACATGTA chr4 + 94230402 22600196 22600195 22600268 22600196 22600195 22600268 73 AGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ............x:.....:.----....:...:.x:x..........x...:.....:...::..:..:... 21M4I48M 54/69 78.3% 73/94230402 0.0% 4/69 5.8% -12923370 -81307032 +3026 chr4 + 190214555 9676850 9676849 9676908 59 GTATATATGTATATGTATATATGTATGTGTGTATATATACATGTATACGTGTATATATG chr4 + 94230402 86633933 86633932 86633991 86633933 86633932 86633991 59 GTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:::..x........x.:...::...:....:.........x.:..:.::.x.:.... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -76957083 -17273319 +3529 chr4 + 190214555 9676868 9676867 9676955 88 ATATGTATGTGTGTA---TATATACATGTATACGTGTATATATGTGTGTGTATATATATATGTATATATATAAAAAACACACATGCACAAA chr4 + 94230402 43288468 43288467 43288553 43288468 43288467 43288553 86 ATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGAT-----TTAAAGACTAACATGCTTAAA ...:......:.x:.---..............x:..:..........x...::.......x:x..-----.x...:..xx......x:... 15M3I47M5D21M 64/83 77.1% 86/94230402 0.0% 8/83 9.6% -33611600 -60618802 +3184 chr4 + 190214555 9700510 9700509 9700583 74 GCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGGATGGCTTGAGCCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...x......:.........::::........x:xx.x.:.xx:.....:.....:..x.xx:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -66332694 -27897708 +3233 chr4 + 190214555 9700618 9700617 9700680 63 GCAACAGAGCAAGACCCTGTCTCAAAAAGGCAAAAAAAAAAAAACAACAAAAAAAAACAAAAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ....x:.........xx:x...........x:............x.:..x.:..:x....x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -78682090 -15548312 +3478 chr4 + 190214555 9700637 9700636 9700697 61 TCTCAAAAAGGCAAAAAAAAAAAAACAACAAAAAAAAACAAAAAAAAAAACAGGAAGTCTT chr4 + 94230402 73441368 73441367 73441428 73441368 73441367 73441428 61 TTTCAGAAGGGGGGGGAAAAAAAAGCAAAACAAACAAACAAAAAAAAAAACAGGAACTTTT .:...:..:..x::::........:...x.x...x.....................x.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -63740731 -30489671 +3112 chr4 + 190214555 9724060 9724059 9724099 40 TACTCTTGATCTTAGCCAAAAGGCTGAGAAGCAATGGGAT chr4 + 94230402 37937488 37937487 37937527 37937488 37937487 37937527 40 TACACTTGATCTTAGCCAAAAGGACGAGAAGCAATGGAAT ...x...................x:............:.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -28213428 -66016974 +3121 chr4 + 190214555 9728319 9728318 9728425 107 GTATTCCAGCCTGGGTGACAAAGA---AAGAAAA---AAAGAAAGGAGAAAGAAAGAGAGAGAGAGAGAGAAACAAAGGAGGGAGGGAGGGA---GGGAGGGAGGGAAGGAAGGAA chr4 + 94230402 89501639 89501638 89501754 89501639 89501638 89501754 116 GCATTTCAAGATGTAGGTCAAAGCTTCAAGAAAGCTTATAAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAA .:...:..:xx..x:x.x.....x---......:---.x.:..x.:.:.x.:....:..:.....:..........::.....x:......:---..:.x::..x...::..x:.. 24M3I7M3I55M3I21M 72/107 67.3% 116/94230402 0.0% 9/107 8.4% -79773320 -14457082 +3008 chr4 + 190214555 9728342 9728341 9728391 50 AAAGAAAAAAAGAAAGGAGAAAGAAAGAGAGAGAGAGAGAGAAACAAAGG chr4 + 94230402 66158980 66158979 66159029 66158980 66158979 66159029 50 AAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAGG ..:............:....:...:....::.:x...:x.....:.:... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -56430638 -37799764 +3717 chr4 + 190214555 9728342 9728341 9728402 61 AAAGAAAAAAAGAAAGGAGAAAGAAAGAGAGAGAGAGAGAGAAACAAAGGAGGGAGGGAGG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ...:::.....:.....:.:::...x......:.................:.x.:..:.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -52747372 -41483030 +4069 chr4 + 190214555 9728373 9728372 9728530 158 AGAGAGAGAGAAACAAAGGAGGGAGGGAGGGAGGGAGGGAGGGAAGG-----AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGGAAAAGGAAAGAAACAGAAAAGAAAAGAAAGAAAA chr4 + 94230402 40338142 40338141 40338304 40338142 40338141 40338304 163 AGAGAGAGAGGTGTGATTCAGGGAGGACAAGCAGGTGTGATTAAGGGCTTCCAGGGAAAGCAGGGAGGAAAAACAATGGAAAGGCAGGGAAGATGGGAAGCATCAACAATCAAAGGCCAGAGTGAAAACAAAGGGATTGAAATAGGAAGTAAAGGAAAAAAGA ..........:x:::.xxx.......:x::.x:..x.x..xx:.:..-----.:....:.x...:.....::.x::x:.:....x...:....x..:.:.x.xx..x:.xx:....xx:..:x...::x...:...xx....:..:..:x...:....:..:. 47M5I111M 95/158 60.1% 163/94230402 0.0% 5/158 3.2% -30609769 -63620633 +5070 chr4 + 190214555 9728413 9728412 9728543 131 GGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAAGAAGGAAGGAAGGAAAGAA-------------GGAAGGAAGGAAGGAAGGGAAAAGGAAAGAAACAGAAAAGAAAAGAAAGAAAAACGGAGCAGAAAG chr4 + 94230402 1500701 1500700 1500844 1500701 1500700 1500844 144 GGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaag ......::.:...:.:x..::.....:.:x..:..:.:........:..:x.:.:..:.:.::..-------------.:::....x:........:...x.....:...x.::........x::.:.x.:.x.::.x.:.... 65M13I66M 86/131 65.6% 144/94230402 0.0% 13/131 9.9% 8227712 NA +3028 chr4 + 190214555 9728468 9728467 9728513 46 AAGGAAAGAAGGAAGGAAGGAAGGAAGGGAAAAGGAAAGAAACAGA chr4 + 94230402 92115722 92115721 92115767 92115722 92115721 92115767 46 AAAAACAGAAAGAAAGGAGGAAGAAAGGCAAAAGGAAAGAAGCAGA ..::.x....:...:.:......:....x............:.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -82387254 -11843148 +3031 chr4 + 190214555 9738358 9738357 9738409 52 ATATATATATATATATATATATATATATATATGTATATATATTTTTTTTTTT chr4 + 94230402 23063162 23063161 23063213 23063162 23063161 23063213 52 ATACTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTT ...:x.:..xx...............:.:.:...:.:...x........... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -13324804 -80905598 +3217 chr4 + 190214555 9740251 9740250 9740339 89 CTTTTCTTCCTTCCTTCCTTCTTCTCCTTCTGCTT--------TCTTTCTTTCTCTCTCTCTGTCTCTCTCTTTCTTTCTTTTTCTCTTTCTCTCTC chr4 + 94230402 18131233 18131232 18131329 18131233 18131232 18131329 97 CTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTATC ..:..x:..x..::...x........:.:....:.--------..:::......:::..x..x:...:.:xx::..:x.:.:............x.. 35M8I54M 59/89 66.3% 97/94230402 0.0% 8/89 9.0% -8390982 -85839420 +3476 chr4 + 190214555 9745694 9745693 9745751 58 TGGAAAAGGAGTGGTGTGTGTGTATGTGTGCGTGTGTGCATGTGTGTGCATGTGTGCA chr4 + 94230402 320568 320567 320625 320568 320567 320625 58 TGAAAATGGGGGTGTGTCTGTGTATGTATACGTGTGTTCATATGTGTACAAGTGTGCA ..:...x..:.xx....x.........:.:.......x...:.....:..x....... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 9425126 NA +4318 chr4 + 190214555 9745701 9745700 9745841 141 GGAGTGGTGTGTGTGTATGTGTGCGTGT-------GTGCATGTGTGTGCATGTGTGCAT----GTGTGTGTGCATGTGTGTGCACGTGCATGTCTGCATACGTGTGTGCATGTGTGTTCACGTGTGTGCATGTGCATGTGCGCAAGTGTGCG chr4 + 94230402 5214169 5214168 5214316 5214169 5214168 5214316 148 GGGGCAGTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCAT----GCAGATGTGTG ..:.::...x.x....:x:.:..x.:::-------.....x.....:x....x.::.::----.......:...x....x.....:::...x.x:.::..:.::.x...........x.:.:x::...::.......----...::....:. 28M7I24M4I74M4D11M 90/137 65.7% 148/94230402 0.0% 15/137 10.9% 4531532 NA +3235 chr4 + 190214555 9745723 9745722 9745812 90 GCGTGTGTGCATGTGTGTGCATGTGTGCATGTGTGTGTGCATGTGTGTGCACGTGCATGTCTGCATACGTGTGTGCATGTGTGTTCACGT chr4 + 94230402 5214232 5214231 5214321 5214232 5214231 5214321 90 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .:.....:...x....x....:::::::x.::....:.....x..::..:::....:::xx:.::.::...::....x:.....x...:. 90M 53/90 58.9% 90/94230402 0.0% 0/90 0.0% 4531491 NA +4436 chr4 + 190214555 9745737 9745736 9745865 129 GTGTGCATGTGTGCA---------TGTGTGTGTGCATGTGTGTGCACGTGCATGTCTGCATACGTGTGTGCATGTGTGTTCACGTGTGTGCATGTGCA----TGTGCGCAAGTGTGCGTGTGCGTCTGTAAGCATGTGCATA chr4 + 94230402 5214181 5214180 5214320 5214181 5214180 5214320 140 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCA--TGCAGATGTGTGCACA .....x..:..x...---------..::x......x::..x.::.:.:.x.:...x...::.x....x....::::::.::......:.....x....----.........::...:......:--..:.::::......:. 15M9I74M4I22M2D16M 86/127 67.7% 140/94230402 0.0% 15/127 11.8% 4531556 NA +5520 chr4 + 190214555 9745759 9745758 9745930 172 GTGCATGTGTGTGCACGTGCATGTCTGCATACGTGTGTGCATGTGTGTTCACGTGTGTGCATGTGCATGTGCGCAAGTGTGCGTGTGCGTCTGTAAGCATGTGCATACGTGTGTGCATGTGCATGTGCATGCCTATGTGTGAGCGTGTGTGTGCATGTGGATGTGTGCATGT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCA-------GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGT----------CTGCACACACAT--CTACGTGTATGCATTTGCATGTGTGTGC------GCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x:x.....x::.:.x...::x.x...-------.....x.....::..:.x.:::....x:.::.............----------...:.x:..::.--x.......:.....x........::...------.::.:..............::..........::. 29M7D44M10D12M2D28M6D34M 106/147 72.1% 147/94230402 0.0% 25/147 17.0% 4531584 NA +4223 chr4 + 190214555 9746099 9746098 9746210 112 GTGCATGCATATCTCTGGGTGTGCATGTGTGTGTGCATGTATGTGTGTGCATA--------TGTGTGCATGTGCATGTGTGTTTGCATGTGTGTGCATGCATGTGTAGCTCTGTGCATAT chr4 + 94230402 5214204 5214203 5214321 5214204 5214203 5214321 118 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCA--TGCAGATGTGTGCACAT .....x.::.::.:x....:::....x:........:::x:...x..::..:.--------...:.....x...........x:...x::.....::....--..:..x.x......:.. 53M8I40M2D17M 76/110 69.1% 118/94230402 0.0% 10/110 9.1% 4531895 NA +3748 chr4 + 190214555 9746116 9746115 9746214 99 GGTGTGCATGTGTGTGTGCATGTATGTGTGTGCATATGTGTGCA--------TGTGCATGTGTGTTTGCATGTGTGTGCATGCATGTGTAGCTCTGTGCATATGTGT chr4 + 94230402 5214209 5214208 5214315 5214209 5214208 5214315 107 GGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGT .......x::..x.:::....x::......:...x:...x....--------.::.::.:..::...............:::x.:....:xx.x::....x...... 44M8I55M 66/99 66.7% 107/94230402 0.0% 8/99 8.1% 4531907 NA +3990 chr4 + 190214555 9746223 9746222 9746353 131 GTGCATGTGTATCTGTGTGTGTGCATGTGTGTGCCTGTATGTATATCTGTATTTTTGTGCGTGTGTGTATCTGTATGTGTGCTTCCATGTGTGTGTGGGGGTACATGTGTGTATGCATGCATATGTGTGCA chr4 + 94230402 5214204 5214203 5214318 5214204 5214203 5214318 115 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGT----------------GCGCAAACGTGTGTGTGCATGCAGATGTGTGCA .....x....::.::..x.:::....x:.....:x:.:.x..:.x.x:::.:x:x.x.:.....:..:..:..:.......:----------------.x.:.x.:......:........x......... 82M16D33M 76/115 66.1% 115/94230402 0.0% 16/115 13.9% 4532019 NA +4113 chr4 + 190214555 9749416 9749415 9749512 97 CTCTTTCTCTCTCTCTCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATA-TATATATATATATATATATATATATATT chr4 + 94230402 4618339 4618338 4618434 4618339 4618338 4618434 96 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT-TATATGTT ..x...:...:...:x::.x.xx.......::..............x:..x.x.......x.x......-....x......-.......-.....:.. 69M1I11M1D7M1D8M 75/95 78.9% 96/94230402 0.0% 3/95 3.2% 5131077 NA +3660 chr4 + 190214555 9749418 9749417 9749507 90 CTTTCTCTCTCTCTCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 4618339 4618338 4618426 4618339 4618338 4618426 88 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATAT ..x.:.:...:...:::::x:.x.......::..............x:..x:::......x.x......-:....x......-....... 69M1D12M1D7M 64/88 72.7% 88/94230402 0.0% 2/88 2.3% 5131079 NA +3951 chr4 + 190214555 9749422 9749421 9749512 91 CTCTCTCTCTCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATATT chr4 + 94230402 4618339 4618338 4618427 4618339 4618338 4618427 89 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATATT ..x.:.:...:x.x..:x.::.x.......::..............x.x...::......x.x......-:....x......-........ 69M1D12M1D8M 68/89 76.4% 89/94230402 0.0% 2/89 2.2% 5131083 NA +3032 chr4 + 190214555 9749427 9749426 9749513 87 TCTCTCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATATTC chr4 + 94230402 60831519 60831518 60831604 60831519 60831518 60831604 86 tcccatacaTA-TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC ..:.x:....:-...x.....x.............x.x.x.x:..:.:....:.:.:.:::.:.:x.x..x...:..x.....:x.. 11M1D75M 58/86 67.4% 86/94230402 0.0% 1/86 1.2% -51082092 -43148310 +3173 chr4 + 190214555 9749441 9749440 9749511 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.x:....:.:....:.:.:.:::.:.:x.x..x...:..x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -51082089 -43148313 +3071 chr4 + 190214555 9749443 9749442 9749491 49 TCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATAT chr4 + 94230402 81889436 81889435 81889484 81889436 81889435 81889484 49 TCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACAT ..:......:.:x......:.............x.x...:...:..:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -72139993 -22090409 +3196 chr4 + 190214555 9749443 9749442 9749511 69 TCTCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x.............x.x:......:.:....:.:.:.:::.:.:x.x..x...:..x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -51082087 -43148315 +3140 chr4 + 190214555 9749445 9749444 9749509 65 TCTCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831594 60831530 60831529 60831594 65 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT ...x.....x.............x::.......:.:....:.:.:.:::.:.:x.x..x...:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -51082085 -43148317 +3445 chr4 + 190214555 9749447 9749446 9749516 70 TCTCTCTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATATTCACA chr4 + 94230402 60831530 60831529 60831599 60831530 60831529 60831599 70 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATA ...x.....x............::.:.......:.:....:.:.:.:::.:.:x.x..x...:...:.:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -51082083 -43148319 +3494 chr4 + 190214555 9763693 9763692 9763777 85 TCATCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAA chr4 + 94230402 75248047 75248046 75248131 75248047 75248046 75248131 85 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaa ..x.::...................x.x..............x.x.x.x.x.x.x.x.x.x.x.x.x.x.x.:...:...:.... 85M 62/85 72.9% 85/94230402 0.0% 0/85 0.0% -65484354 -28746048 +4002 chr4 + 190214555 9763699 9763698 9763777 79 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAA chr4 + 94230402 75248049 75248048 75248127 75248049 75248048 75248127 79 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaa ..::....................................x.x.x.x.x.x.x.x.x.x.x.x.x.:...:...:.... 79M 61/79 77.2% 79/94230402 0.0% 0/79 0.0% -65484350 -28746052 +3489 chr4 + 190214555 9763703 9763702 9763777 75 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAA chr4 + 94230402 75248049 75248048 75248123 75248049 75248048 75248123 75 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaa ..::...............x.x..................x.x.x.x.x.x.x.x.x.x.x.:.:.:...:.... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% -65484346 -28746056 +3316 chr4 + 190214555 9763703 9763702 9763738 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -2837601 -91392801 +3015 chr4 + 190214555 9774690 9774689 9774780 91 ATCATTTTCTCTCTCTCTCTCCTCTTCCTCTCCTCCTTCTCATTTTCCTTCTCTTTTTCTTTCCTCTCCTTCCCTCCGTTCTTCTTTTTCC chr4 + 94230402 37521437 37521436 37521527 37521437 37521436 37521527 91 ATTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCTTGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTTCC ..:x...::.x..::.:.x.x..:::.......::.:.x.xxx..x::....:xx....:..::.:...::...:..x..:..:....... 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% -27746747 -66483655 +3950 chr4 + 190214555 9774716 9774715 9774848 133 CCTCTCCTCCTTCTCATTTTCCTTCTCTTTTTCTTTCCTCTCCTTCCCTCCGTTCTTCTTTTTCCTTCTTTTTCTCT---ATCTTCCTCTCTCCCTACTTCTTTCTCTTTCTCTCCCTTTAA-TTTGCTCTATTCTC chr4 + 94230402 4266728 4266727 4266863 4266728 4266727 4266863 136 CCTTTTCCTCTTCGATTTTTTGTTTTCTCTTTTCTTCCACAGCTGCCCTCCGTTGTTCGTCTTTCTGCTTTTGTTCTTTCAGCTTTCTCT-GCCTTTCTTCTAACTGTTTCTCATACTGGAGTTTTGCTTTTCTCTC ...:.:.::....xxx....:x..:...:...::....x.xx..x.........x...x.:..:..x.....x:...---.x...:....-x..:.x.....xx..x......x:x..xx.:-......:.x:.... 77M3I10M1D31M1I14M 91/132 68.9% 136/94230402 0.0% 5/132 3.8% 5507988 NA +3036 chr4 + 190214555 9778024 9778023 9778128 105 TTTCTACTTCT-------ATTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCTCCCCGCCTCCC chr4 + 94230402 33980781 33980780 33980892 33980781 33980780 33980892 112 TTTCTACTTTCTCACCTCAAATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCC .........::-------.xx....:.xx.:x...:x.....x.xxx.x.:::..:x...:x.....xx...:x......x......:.....x.x....:..:.x.:.:.. 11M7I94M 69/105 65.7% 112/94230402 0.0% 7/105 6.7% -24202757 -70027645 +3013 chr4 + 190214555 9778800 9778799 9778882 83 CAGTTTCTTTTTTTTTCTTTCTTTCTTTTCTTCTTTTTGTAATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGC chr4 + 94230402 29047980 29047979 29048062 29047980 29047979 29048062 83 CAGTTTCTTTTTTTTTTTTTCCTCCTTCTTTTCTCCCTGTTAGTGTGACACACCTGGCCCCAACAGCTAGCAGGGAGTGATGC ................:....:.:...:.:....:::...x.xx.x.x.x...::x.:.x.xxx:...:.x:x.x....:... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -19269180 -74961222 +4814 chr4 + 190214555 9782332 9782331 9782448 117 CGAGGTGGCCGGTTACTGGCCCTTTGGAG---CGTTCTGCGACGTCTGGGTGGCCTTCGACATCATGTGCTCCACTGCCTCCATCCTGAACCTGTGCGTCATCAGCGTGGACCGCTACTG chr4 + 94230402 89301220 89301219 89301339 89301220 89301219 89301339 120 CGAGGTGACGGGGATGTGGTTGTTTGGGAAGCTGTTCTGCAAGGTCTGGATCTCCTTTGATGTCATGTTCTGCACCGCTTCCATTGTCACTCTGTGCTTTATCAGCTTGGACAGATACTG .......:.x..xxxx...::x.....::---:.......:.x......:.xx....:..::......x..x...:..:.....:x.x.x:......x.:......x.....x.x..... 29M3I88M 83/117 70.9% 120/94230402 0.0% 3/117 2.6% -79518888 -14711514 +3122 chr4 + 190214555 9813833 9813832 9813892 60 CACCTGTAATCCCAGCACTTTGAAAGGCTGAGGCAGGTGGATCACTTGAAGCCAGGAATT chr4 + 94230402 76033207 76033206 76033266 76033207 76033206 76033266 60 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ...x....:.:.....xx:.............x.xx...:.x........x....:.::. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -66219374 -28011028 +3034 chr4 + 190214555 9823728 9823727 9823794 67 TGGAGTAAATATCAGAGTATAAACAAAAGGGTTTGGAATTGAGATGATGCATTTGATTTAATACAAA chr4 + 94230402 78163487 78163486 78163553 78163487 78163486 78163553 67 TAGAGTGAATATCAGACTAGAAACCAAAGAGCTTAAGATTGAATACATGTATTTGGTTTTATCTAGA .:....:.........x..x....x....:.:..:::.....:xxx...:.....:...x..x:.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -68339759 -25890643 +3417 chr4 + 190214555 9853045 9853044 9853105 61 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........::::........x.xx.x...x..........::.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -66180159 -28050243 +4138 chr4 + 190214555 9892458 9892457 9892624 167 GCCCAGTGGAACAGAGCACAGGTGACATCCAGGGGCACAAAAGCCTGAAGATGGGCCATCTGAGCTGAATTCCTGGCTTTGCCACTTAGCCTTCTTTGCACCCAGGACAGGTTATTCAGCTTTTCCAA-GTCTCAGTTTCCCCACCTGGAAAATGAGAATGATAATAC chr4 + 94230402 13242403 13242402 13242545 13242403 13242402 13242545 143 GCACAGTG--ACAGAGCACAGG--ACA-----AGACAGCAAGACTTGAGG--------TCTG-------TTCCCAGCTCTGCCACTGACTCACCTGTG-ACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTAC ..x.....--............--...-----:.:..xx..::.:...:.--------....-------....::...:.......x.x:.x:..x..-...:x..:..:..:.:x:...:.:..:..-.:.............:...x.....::.:..:x..x... 8M2D12M2D3M5D18M8D4M7D29M1D29M1I39M 104/142 73.2% 143/94230402 0.0% 26/142 18.3% -3349945 -90880457 +3225 chr4 + 190214555 9892557 9892556 9892647 91 ACCCAGGACAGGTTATTCAGCTTTTCCAAGTCTCAGTTTCCCCACCTGGAAAATGAGAATGATAA----TACCATTTTTGCAGGGTAGCTGTGAG chr4 + 94230402 83501142 83501141 83501236 83501142 83501141 83501236 95 ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAG ..:.x..:..::...:.:.:.:.x.x::x.:........:........x......:::x.....:----....xx::.::.....xx::...... 65M4I26M 59/91 64.8% 95/94230402 0.0% 4/91 4.4% -73608585 -20621817 +3211 chr4 + 190214555 9920747 9920746 9920808 62 ACAGAGGCCCAGAGAGATGCCATGATTTGCTCAACATCACCCAGCTGGCT-GGGAGAAAAGCT chr4 + 94230402 52564012 52564011 52564074 52564012 52564011 52564074 63 ACAGCGTCTCAGAGAGGTGACATGACTTGACCAAGATCACCTTGCTGACTAAGGGGAAAAGCT ....x.x.:.......:..x.....:...x:...x......:x....:..-:..:........ 50M1I12M 48/62 77.4% 63/94230402 0.0% 1/62 1.6% -42643265 -51587137 +3806 chr4 + 190214555 9931898 9931897 9931997 100 CCTGAAATGAGAATGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA-TATATATATATATATATAT chr4 + 94230402 4618327 4618326 4618426 4618327 4618326 4618426 100 CCTATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT ...:x.x..x.:x..x:.:...:...:x:x.::.x.......::..............x:..x.x:......x.x......-....x......-....... 81M1I11M1D7M 72/99 72.7% 100/94230402 0.0% 2/99 2.0% 5313571 NA +4135 chr4 + 190214555 9931911 9931910 9931999 89 TGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATA-TATATAT chr4 + 94230402 4618336 4618335 4618426 4618336 4618335 4618426 91 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT ..:..x.:.:...:...:x:x.::.x.......::..............x:....::......x.x......-....x.....-....... 72M1I10M1I7M 68/89 76.4% 91/94230402 0.0% 2/89 2.2% 5313575 NA +3497 chr4 + 190214555 9931915 9931914 9931990 76 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA-TATATATATA chr4 + 94230402 4618342 4618341 4618418 4618342 4618341 4618418 77 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA .:.:...:...:x:x.::.x.......::..............x:..x.::......x.x......-....x..... 66M1I10M 56/76 73.7% 77/94230402 0.0% 1/76 1.3% 5313573 NA +3645 chr4 + 190214555 9931916 9931915 9931995 80 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:...:x:x.::.x.......::..............x:x...::......x.x......-....x...... 69M1I11M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 5313577 NA +3739 chr4 + 190214555 9931918 9931917 9931997 80 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:...:x:x.::.x.......::..............::x...::......x.x......-....x...... 69M1I11M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 5313579 NA +3525 chr4 + 190214555 9931920 9931919 9931999 80 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:...:x:x.::.x.......::............x.::x...::......x.x......-....x...... 69M1I11M 58/80 72.5% 81/94230402 0.0% 1/80 1.2% 5313581 NA +3340 chr4 + 190214555 9931939 9931938 9932032 94 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA----------TATATATATATATATGCCTTGCCTGACTTGGAAAATCTCTCTCATGAG chr4 + 94230402 60831530 60831529 60831633 60831530 60831529 60831633 104 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCTCATAAG ...x.....x.............x.:.......:.:....:.:.:.----------..x...:..x......x::..:x:.xx.xx.x:x..x.:......:.. 46M10I48M 66/94 70.2% 104/94230402 0.0% 10/94 10.6% -50899591 -43330811 +3055 chr4 + 190214555 9931941 9931940 9931998 58 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATA chr4 + 94230402 60831530 60831529 60831587 60831530 60831529 60831587 58 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTA ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x.x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -50899589 -43330813 +6772 chr4 + 190214555 9980974 9980973 9981368 395 TGGAGGTGATGGTATTGATGGTGATAATGACGGTGATGGTGATAACGGTGGTCGTGATGGTAGTGATGGTGGTGGTGATAGTGATGGTCATGATGGTGATGATGATGGTAGTAGTGATGGTAGTAATGGTGATGGTGGTAGTGGTAGTGATGGTAATGATGGCGATGGTGACGGTGATGATGGTGGTGGTAATGGTAGTGATGGTGGTGGTGGTAGTGATGGTCATGATGGTGATGAT---GATGATGGTGGTGGTGATGACTGTGATGATGGTTGTGGCAATGATGATGATGGTGATAGTGGTGGTGGTAGTAGTAATGGTTATGATAGTGATGGTGGCGATGGTGGTGATAGTGATGGTGT-------GGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGG chr4 + 94230402 92132474 92132473 92132875 92132474 92132473 92132875 402 TGGGGATGTTGGCAATGCTGGGGGCTTTAGGGTTGTTGGGGACGCGGGGGATGTTGAGGACATTGGGAATGTTGGGGAA---GATGGCAATGTTGGAGATGTTGAGGACATTGGGGATGTTGGGGAAACGGACAGTACTGGGGACTCTGGGGATGTTGAGGATGCTGGGGAAGCTGGCAATATTGGGGACATTGGGAACAGTGGAGATGCTGGGGATGTTGGGGACATTGGAGATATTTGGGAAGCTAGCAGTGTTGGGGACTTCGGGGACATTTAGGATGTTGAGGAAGATGGTGGTATtggggatgctggggatgttggggatgctggcgatgttgggAACGCTGGAGACATTGGGGGGGCTTTGAGGGGTGTTGGGGACATTGGAGATGTTGGGGAAGCTGG ...:.:..x...:.x..x...x.::xx.::x.x..x...x..::xx..x.:.xx...x.::.x..:x::..x...x..x---.....:x...x...x....x...x.::.x.:.x....x.:.x:.x:xx..::..:x.:.x.::xx..:x.:.:x...x.::.x...x..x.x..:::..:x...x.::.x...x.::::...x.:..x...x::..x...xx.::x...x...:x.---..x.x.:.::...x..:x....x:.:x..::x..:x.:::x...x..x.......:..x...x.:..x.:.x::.:x...xx...x.:.:....x...x:.:.x...x..:.x..:x..x.:-------....x...x.:::x...x....x...x..x.x... 79M3D156M3I122M7I35M 224/392 57.1% 402/94230402 0.0% 13/392 3.3% -82151500 -12078902 +3409 chr4 + 190214555 9984465 9984464 9984537 73 TTCAGCCTTATTATAGCCTTTTGAAGTAGGTATTATTACCACCATTTTACAAATGGGAAAACCAAGGCTCAGA chr4 + 94230402 91240182 91240181 91240254 91240182 91240181 91240254 73 TTAAGCCCCACAGTCTTCTTGTGGAGTAGGAATTATTGCCATCATTCTGCAGATGGGGAAGCTGAGGTACAGA ..x....::.:x:.xx:...x..:......x......:...:....:.:..:.....:..:.::...:x.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -81255717 -12974685 +3555 chr4 + 190214555 9997570 9997569 9997642 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCTCTTGGACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.x..x...x.x....:......:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -66035635 -28194767 +3189 chr4 + 190214555 10058734 10058733 10058812 79 GTGGTGCGCATCTGTAGTCCCAGCTAATTGGGAGGCTGAGGCAGGAGATTTGCTTGAACCTGGGAGGTGGAGGCTGAAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.:.--.....:.......x...::........x.xx.x..xx::........::.:..x.xx:.....x.. 11M2D66M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -65974467 -28255935 +3377 chr4 + 190214555 10060222 10060221 10060291 70 CATGGTGGCGGGCGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCCGGAGAATCACTTGTATCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x:..--....:.:...........:.........x..x.x...x......x.:.::.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -65972975 -28257427 +3803 chr4 + 190214555 10066097 10066096 10066191 95 ATATGGTGGTGCGTGCCTGTAGTCCCAACTACTCGACAGGCTGAGATGTGATGATCCCTTGAGCCCAGGAGTTTGAAGCTGCAGAGAGCCATGAT chr4 + 94230402 76033196 76033195 76033285 76033196 76033195 76033285 90 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGAT .:.::.......::.--......:...:.....:..x........x:x..xx:.x.x.....:.....:..:..x::....:...:---...... 15M2D69M3D6M 65/90 72.2% 90/94230402 0.0% 5/90 5.6% -65967099 -28263303 +3100 chr4 + 190214555 10069025 10069024 10069095 71 CACCTGTAGTTCCAGCTACTCAGGAAGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x................::::.:......x.xx.x...x::........::.:..x:xx:..:..:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -65964182 -28266220 +4233 chr4 + 190214555 10170724 10170723 10170963 240 TTCTACAATGGCTTGTCCTT---ATGAATTATGGGATGCCAGTAATGTGTTTAATATTCCATATAGAGAAAAATGTAGCTAGAGCTTGGCTAGTATAGCCTGGGGCATTATCTGTTTTAACTGAAGTTGGAATGCCTATGATTGTGTGAAGCCTTGTAAAAGATGCCACTTAATACAGGCAGAAGATTCTC-CTGTTTTGACAGGTAGCT----TAAAGTGAGAAAATGTGTCTACATATACATGCAC chr4 + 94230402 19065358 19065357 19065600 19065358 19065357 19065600 243 TTCTACTATCGTCTGGCCTGTGGGCGAGTT-CAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAAC--CGCAAAGCAACAACTGAGATGC--CTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ......x..x.::..x...x---::..:..-::....:..x...x.......x.:x::....:.xx:x.:...:x:xx.x..xx:x:.:.....:...x.....x....:........x.:.x:x:x...x..:..:..:.:--:.::....xx::xxx:......--...xx....x...x.:xx..:..-.::xx....xx...:..:----....:...xx.x....:....:.x.:..:..:.. 20M3I7M1D111M2D22M2D23M1I18M4I34M 145/235 61.7% 243/94230402 0.0% 13/235 5.5% -8894634 -85335768 +7640 chr4 + 190214555 10232285 10232284 10232562 278 TACATGTCCATAGATG-----GAGCCTACTCCCCAGAACACGTTAATACAGTGA---------CATTGTTCCAA------ACGT-----AGATTTAAAACTAGAACATGTCCCTTTTACACATGCTTAAAAACATCAG--AGCTTTACATGAATTTCAGTTTGGGTTCAGTGAAAACATCTGCCCCATTTGAGCCTTTACAACTGCTAG------TCTCTTTGAGTTCTGGCACTGTGAATTGTAATGGCT-----TGTCATTTTTTGTCTTGGATTTTATTCTTCAG----TACTTTTCCATTTACAGTCTACAAACTT chr4 + 94230402 82333644 82333643 82333960 82333644 82333643 82333960 317 TACATCTTCATAAACATTAGTGAGTACTCTCTCCAAAACATATTAAGGCAGTGGTATCAATCTCATTATCCCAAGATACAACATTTAAAAAATATATACCTAAGTGATTTCCCTTAAACATGCACC---AGACATCAGTAATCTTTACAGGAATTTCAGCTTGGGTTCAAACATAATTTCTGCTCCATTTGAGAGTTTGCAACAGAGAGAATCTCTTACTTCAAGCTCTAGCACTCTGAATTCTAACAGCTCATTCTGGTCTTTTGCATCTTGCATCTCATTCTTCAGCTGATGCTCTTCTTGTTCCATTCTGTAAATCT .....x.:....:.::-----...:x:x...:...:....::....x:.....:---------....:.:....------..:.-----.:..x..x.x...::xx..x......xx...::::.:---.:.......--.x.......x.........:.........:xx.x..:x.....:.........xx...:....x.xx..------.:x...::..:...:.....x......x...::...-----..x:x....x::.....x..:.:.........----.:..:...:xx..x..x...::...::. 16M5I33M9I11M6I4M5I37M3D9M2I69M6I36M5I32M4I28M 193/275 70.2% 317/94230402 0.0% 45/275 16.4% -72101359 -22129043 +3112 chr4 + 190214555 10379340 10379339 10379453 114 CTCATCTTGAATTGTAATAATCCCCATATATATATATATATGTATATGTATGTATGTATGTATATATGTGTATATGT--GTGTATATATATGTGTGTGTATGTGTATGTGTGTGTA chr4 + 94230402 89812942 89812941 89813057 89812942 89812941 89813057 116 CTCAGTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA ....x:..:x..xx..:.:x.:x:x::.....x...x......:...:.x.:x...:x.xx...:.....:.x.:x:--:..::...:.x:x.......:.......:.:...x.. 77M2I37M 71/114 62.3% 116/94230402 0.0% 2/114 1.8% -79433602 -14796800 +3684 chr4 + 190214555 10379376 10379375 10379505 130 TATATGTATATGTATGT---ATGTATGTATATATGTGTATATGTG--TGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATAT---GTATATATGTATGTGTATATA chr4 + 94230402 89812949 89812948 89813086 89812949 89812948 89813086 138 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA .......xx:...x...---..:..x:..x............x.:--..:x.xx...::....::x.:x:x:...:..:...x:x...:.................x..x..x.---..x.x....x.::x.:..:.. 17M3I25M2I67M3I21M 89/130 68.5% 138/94230402 0.0% 8/130 6.2% -79433573 -14796829 +3401 chr4 + 190214555 10379383 10379382 10379482 100 ATATGTATGTATGTATGTATATATGTGTATATGTGTGTATATATATGTGTGTGTATGTGTATGTGTGTGT----ATGTGTATGTGTGTGTATATATGTGTATAT chr4 + 94230402 5214218 5214217 5214321 5214218 5214217 5214321 104 ATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:x.:.:.:..x::...:.:::::x..:.x..:::::.:..x..:....:..:..x..:.........:----.:....:....::..:.x..:....:.:.. 70M4I30M 61/100 61.0% 104/94230402 0.0% 4/100 4.0% 5165165 NA +3369 chr4 + 190214555 10379386 10379385 10379502 117 TGTATGTATGTATGTATATATGTGTATATGTGTGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATATATGTATGTGTAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.x..:..:x::.:x::.:.::.x::......:::.x:.:.x..:::::.::.x..:....:..:..x..:.........:::.x.:....:.:.:::.::.x....:..:::.. 117M 63/117 53.8% 117/94230402 0.0% 0/117 0.0% 5165181 NA +3051 chr4 + 190214555 10379387 10379386 10379449 63 GTATGTATGTATGTATATATGTGTATATGTGTGTATATATATGTGTGTGTATGTGTATGTGTG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..::..::...x......:.x......::..:..:.:.....:::.x......::.x...:.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -76254542 -17975860 +3137 chr4 + 190214555 10379393 10379392 10379461 69 ATGTATGTATATATGTGTATATGTGTGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x::..:::.::..:x:...:...x.:....:...:........:.::..x...:..:..x...... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -76254530 -17975872 +3438 chr4 + 190214555 10379400 10379399 10379533 134 TATATATGTGTATATGTGT----GTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATATATGTATGTGTATATATGTGTATATATGTGTATATATGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA---GTTTCTGTGGGTGTACA ....:......:.x.x...----....x.......::x:::..:.::x:....::x...::......::x::.::x.x.........:.....:x..:.:::..:.:.::x.xx..:.---..x.x.:.:x.....:. 19M4I95M3D17M 80/131 61.1% 135/94230402 0.0% 7/131 5.3% -10729794 -83500608 +3189 chr4 + 190214555 10379415 10379414 10379478 64 GTGTGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..:.:.....::......x.:..::x.:..x::::...........x.....x.......x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -66330176 -27900226 +3092 chr4 + 190214555 10379416 10379415 10379489 74 TGTGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATA chr4 + 94230402 89748651 89748650 89748724 89748651 89748650 89748724 74 TGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ......:........xx.x.......x......:...x....:.::.::::::.:x...:..x.x.:.::..:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -79369235 -14861167 +3523 chr4 + 190214555 10379424 10379423 10379507 84 TATATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATATATGTATGTGTATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x::.x.....x.....:.........:.:.xx....:x.::..:......:x...:....x...::::.::.::.:.:... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -75455109 -18775293 +3259 chr4 + 190214555 10379426 10379425 10379509 84 TATGTGTGTGTATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATATATGTATGTGTATATATGTG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x::.x...:.x...:.........:...:.xx:...:x.:...:..:....x...::.:.x....:.::::..:.:.::.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -75455107 -18775295 +3663 chr4 + 190214555 10379437 10379436 10379576 140 ATGTGTATGTGTGTGTATGTGTATGTGTGTGTATATATGTGTATATATGTATATATGTATGTGTATATATGTGTATATATG----TGTATATATGTGTATATATGTATATCCTGAGATGATTCTGAAATATTTCCTGTCGGCAT chr4 + 94230402 21109187 21109186 21109325 21109187 21109186 21109325 139 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATT-----ACAGTTTCTGTGGGTGT ..x..:x.:.:::...:...x.x....x.:....x...:....:x:.::....:x:..:.::x....::.:....:x:...----...:...........:x..:.::..x.xx.x:x....-----.:.x..:....x..::. 81M4I37M5D17M 85/135 63.0% 139/94230402 0.0% 9/135 6.7% -10729750 -83500652 +3158 chr4 + 190214555 10379601 10379600 10379671 71 GCCTAGAGGCAAGCAGCCCAAGGCTCTGCATATATATATATATATATATATATATATACACACACACCCCC chr4 + 94230402 4409058 4409057 4409128 4409058 4409057 4409128 71 GTCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACATTTTCCC .:...:..x:..:x..x:::.....x.:................:.:.:.:.x.x.:.......:x::... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 5970543 NA +3258 chr4 + 190214555 10379819 10379818 10379887 69 TACATACACATACACATACACACATATACACACACACATGCACACACATACACATACACACACATACAC chr4 + 94230402 54963193 54963192 54963261 54963193 54963192 54963261 69 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .::...:x......x..:.....x....:.........::xx...:::::.x..........:x..:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -44583374 -49647028 +3320 chr4 + 190214555 10379843 10379842 10379909 67 TATACACACACACATGCACACACATACACATACACACACATACACACATACACACACACATATATAC chr4 + 94230402 54963195 54963194 54963261 54963195 54963194 54963261 67 TATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ....:x..:...x........x:...:...:.......xx:..:::.::x..:........x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -44583352 -49647050 +3133 chr4 + 190214555 10380031 10380030 10380097 67 ATATACACATACACATATATACACATATACACATATACACACACATACACACATATACACACACATA chr4 + 94230402 57351733 57351732 57351798 57351733 57351732 57351798 66 ATACGTGCAT-CACAGATATATACGTTTACAAATATGCACATACTTTTACACATAGACACACAAATA ...::::...-....x.....:..:.x....x....:....:..x.x:.......x.......x... 10M1D56M 50/66 75.8% 66/94230402 0.0% 1/66 1.5% -46971702 -47258700 +3134 chr4 + 190214555 10380144 10380143 10380209 66 TATACATATATATGTATATACATATATACATATACACATACACATATATACGTGTACACACATACA chr4 + 94230402 87366139 87366138 87366204 87366139 87366138 87366204 66 TATACAAATAGATATAAATACATATATACTTAGAGAAAGAGACCTATACACGTGTACATGTGTGCA ......x...x..:..x............x..x.x.x.x.x..x....:.........::::.:.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -76985995 -17244407 +4073 chr4 + 190214555 10380182 10380181 10380293 112 TACACATATATACGTGTACACACATACATGTATACATACAAGTGTATATATACACAT--ACATGTATATATATGCATGTGTGTGT----ATATGTATGTGTATGTATATATATACACA chr4 + 94230402 5214205 5214204 5214320 5214205 5214204 5214320 116 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCG--CAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA .:..x:.:.::x.:..x:...:...x.:...:.:.:--.......x.::.:......--..:.....::..x............:----.::...:....:...:.x..:.:.:.... 36M2D19M2I26M4I29M 76/110 69.1% 116/94230402 0.0% 8/110 7.3% 5165977 NA +3154 chr4 + 190214555 10380221 10380220 10380295 75 AAGTGTATATATACACATACATGTATATATATGCATGTGTGTGTATATGTATGTGTATGTATATATATACACACA chr4 + 94230402 27325489 27325488 27325563 27325489 27325488 27325563 75 AAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ..:..::...:xx:::.....:x.:x.:x..x::..........:.....:......:...:......:x.x... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -16945268 -77285134 +3008 chr4 + 190214555 10380254 10380253 10380307 54 CATGTGTGTGTATATGTATGTGTATGTATATATATACACACACACACACATATA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .........:.::.:::.::.x....x.:....:........:.......:.:. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% -12867467 -81362935 +3274 chr4 + 190214555 10380257 10380256 10380319 63 GTGTGTGTATATGTATGTGTATGTATATATATACACACACACACACATATATATATATATTTG chr4 + 94230402 79265519 79265518 79265581 79265519 79265518 79265581 63 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTG ........:.:..:......:..xx.:........:....:::::..:.:::.x.:....... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -68885262 -25345140 +3040 chr4 + 190214555 10392770 10392769 10392830 61 TTTCCTCCATATTTTGATTTCTTTTTTTTTTTTCTTTTTCTGTTTTTTTTTTTTTTTTGAG chr4 + 94230402 13063272 13063271 13063332 13063272 13063271 13063332 61 TCTGCTCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTTTAGGAG .:.x....x.:..::xx.....................:.....::.:.::.:...xx... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -2670502 -91559900 +3416 chr4 + 190214555 10399194 10399193 10399273 80 AGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....::..:.--....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 11M2D67M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% -65634006 -28596396 +3045 chr4 + 190214555 10400135 10400134 10400188 54 GTTGTTGTTTTTTGTTTTTTTTTTGTTTTTTTTGTTTTTCTGTTTTTTGTTTTT chr4 + 94230402 89891428 89891427 89891481 89891428 89891427 89891481 54 GTGGTTTTTTTTTGTTTGTTTTGTTTTCTGTTTGTTTTTCCAGTTTTTGCTTTT ..x...x..........x....x.x..:.x..........::x......:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -79491293 -14739109 +3760 chr4 + 190214555 10406248 10406247 10406329 82 AACAGAGTAAGACTCCATCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGATGCTCAGGTAAGTCTGA chr4 + 94230402 18047932 18047931 18048013 18047932 18047931 18048013 82 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCTAAGGTATGACTGA ......::..xx..::x...:x...........x........xx:..:.x:.x........:.x.....x.....x.x.... 82M 60/82 73.2% 82/94230402 0.0% 0/82 0.0% -7641684 -86588718 +3008 chr4 + 190214555 10406266 10406265 10406374 109 CTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGATGCTCAGGTAAGTCTGAACTTCAGATAAAGAATGGAGTTTTCCTTTGATAGACCATGTCCCA chr4 + 94230402 42662403 42662402 42662511 42662403 42662402 42662511 109 CTTCAAAAAAAAAAAAAACAAAAACAAGTAAAACATAATAATTTAGTTGTTAATGATGAACTTAGCTACAAGGATAAAGTAATATTTTCTTTCATTATAACTTGCCCTA ..:...............x.....x..:x....x.x..x..xx...x..:.x.x.xx::x..x.:..x..::x.x.:.:.::x:.....:..::x..x.x.x..:..:. 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% -32256137 -61974265 +56299 chr4 + 190214555 10443100 10443099 10446348 3249 TTACTTATTTGCCCTTGGAGG--AAAGAACATCCCAATCTCTAGTTGCTTCTATCAAATGCCGTTGGCCATGACTCATCCACTCTTCCTGGTCTTCATACAGTCGCCCACAAAACCAGCACTTAAATACACACTGTGAAGAATCATCAGGCAAGGAATCCACTACCTGGTAGTTGTTTTTATGAACTTTTTTGAGTTTCATTTTCAACATCATTTGCCTTTTAATTTGACTGGCTTCTTCCGCATTCTGGTAGGTCAGGCGTACATGATGCCGTCTGATGCCTAGCTGACACCTAGTCCTCTCTGATAAAACAACTTTGAGGACATTGCCTTTGTATTTATTTATTACCTTCATCACATTGGTCACTTCTGGCGAGTCCACATCAGGGTGGTTTAACACAATGACTGGCTGGTTCCGACGGGGACACTTAATCAACTGATCTGGCTTAGCTGCTATCAGTCTTAGTTGCCTTGCAACCTGAAAAATTGAAGGATCCTTGAGACAGCGGCTAGGTTCAGCTTGAATT-TTGTTTTTCTTCCTGGATA--------AGTGTACTTGTTTGGTTTTATTTCTACTTATAGAAAGACTTCTGGAAAGCAGTCTCCCTTGCTTATTTAATTCACTGCTTCCTTGCTGTCCATACAAGAGGCCAGTTTTTCTATGGATGGTGCTACAGACAGCACTCTCTTTTCTCAGTTTAGGCCGCAGAGGTGTCTCGATATTTGGGGACATATCTATTGGCCCCCTTTCACTTCTTAAAGGCTGTAAGT-----CTGAGTCCGCCTGTCTCACAGG-GCAAAATGGAACTGGTTTTATTAACTGTCTTTCACTGCAAGGTATGCTGA-----CAGGTGCTTCACATGTAGCCTCTATGATGTGGGCATTCT------CAGAGGAATTAAGAACCCTCAACACAGCCCCTTTGGGGATTAACACTGGCGTGGCAACATGAGCCTTCCTGGCCACTCTGCTTTTGGTTTTCCTATTACTGCCATCTGCAAAGTGTGGATATATTTGTTGATGAGTAAGCTGTCTATTACCAGTAATACCACCATCATTCGGAGGTTTCTGAAGAGTACCTGTGGAATGGCCAAGACCAGTG-------AGTGACACGTTGATTTCTTGAATACCTTCAGAG----GTAGCTTTTGAAGTTCCCTTTGATGCCTGCCCTACAGAGCGACGATGTGCACTATTTGAAGCCAAAGATGACGGCTTCCCACAGGACTCA---------ATTAACTGAGCTATCTTTCTGCGCAACAGTTCAATTGACTTTATTTTAGACGTTGAGCTATTCCACTTAATGCCCTCGGGGACATTTTCAGATCCAGAGCTCAGAGAAAATACTGATGAGATGACTGGGCCATCATTAGTGTTGTTAGTCCTTTCAGAATTCTTTAATTCCAAAGGCTTATCCCCAG---------GCTGTTGAGATCTATCTTCTCCAGTTATGTTTA-TATGTAAATACTCACTCTTATGT-----TGAGAGGAAATCTGGCCTACAGTTGAAACTGCCTTGTGTTCC------TCTGTCTGGTTATCT-TCCTGCTTCCTATTAGAGGAAACCACTTTTACAGGAATATTGACTTT---ACTTGTAGATTCCAAGTCATTTTCACTTACAGGCAATAAGCCCTTTTCTCCAGAGAAGGAACAGGTTGCAGGTGATGCAGCAAATGGG-AGTAACTGCTG------TGAG------CTACTGTGTAAATTT-----CTTCCACTTTCAGCAAAACAAACAGCAGCTTTATATGGAAAAGGGTTTGATGCAGCTCC-----AAGACTAC----------GTAAAACACTGTTTTTAAATAC---------AGATGCTAGAGAATGACCTTT-------------TAAGGCAACGGAA---GGAAAAGCAGTTCTATG-----TGGATACAAATTATTTTTTTTC------TGAA---------------AATCCTCAATTGTTTCCGAATTAATGAAGGATTTTCCATTGTTGTGCACACTAGAATTTGGCATAATAAA-ATCATAAGACCTTACCCATTTCACATTTTTAAGCTGTTTCTGAACTGAAGGTTGAAAACTATCAATGCCTACGAGTTTTCCAACATTCCCGTCAACTGTCAGTGACTTTGTTTTTTCTGCAGAAAGTACTTTTTCTTGTTCATTTGAACCCTTCTCTTTCACCATACGTTCAGAATTACCTCCATTATC---CCTCCCAGCTTCAAGGCAATTATTTTCTTCCAGCGGAAACAGTTTCAGAACAAGCTGCTGTGTACCATTGACAACCTTCACATCTATCAACTGGGCTAAACAGTTTGCAGGGACAACTAGTTCTGCTGGTGCAACAACTGTCAATGGCATACCTGGCTGAACAGGTTCTTTTGCAGGGGATAACACTTCTACTTCAACATTTTTGTTCTCAAATAGGTTGACTTCATTTGGCTCAGACAGGGTCATTTTATTTGGAATACAAACTACATCTTTTTGGTATTCCTTTGGTTCAGGTAACAACATGATATTGTGCATTTTGTCTTTATTTGCATGGAGAGAGAAACCTGACAGTTGGTCTGACCACTTATTTTGAAATGTAGTCCGTGGAT-TGGAAGCTTTTAGAAGCTCTGGGTTTTGTTTTGAAGTTCCGGTTCTTTTTGGCTCCAGCTTGGCAACAGCTTTGACTGGCCGTTTCGCACCTGCCCTTTCATGTACTCTCTTCGTGTGTTTGACAATATAATCATTTCTAATAGCACCATAGTCACAATACTCACACTGATAAGGAAATATGCCTGTGTGTTTCACCAAATGCCTCTGAAACTCTCCTTTCGTATACGAAATGTAGCTGCAGTGAGAACAAATGAATTTAATCTCCTCGTGTTGAAGGGTGTGCTTTTTGTACTGCAGCGGGTCCTTTGTAGAGAATCGACATTTATCACAATAGTATTTGCCTGGCTTAAAGTTCCTTACCTTAAA-----TTTGCTATTGACAGAACTTGAGAAGTTTTCAGTTTTATTTCCAACATGAGTCGCACTGGAATTATTGCTCACAAAATGAAAATTGGGAGGAGCTGCACCGAGGCTGCACTGGAAGCAGACATACATACCGTCC--------------TTCCCTGTACCCTTCTGCAAATCTTGAAGAGAGATCTTGTGAACACTTTTGCACTTTGCACA-TGTAGCAATGGTCATCATGGCAGCCTCTGCCTCTGAGCCTTGATACAAAAGGGTTTGTGCTTCTTGTCTATTTGGCCGAGGTGCTCCATTAGCATCAGGCTGTTTGGGTGACATGGTCAAGGAATTATGTCCGCCGTTCAAGTGTGTAGTGTATAGCTGCTGTCCAATATCCTTCATCTT----ATCTGCATTTCTAAAAA chr4 + 94230402 81209868 81209867 81213116 81209868 81209867 81213116 3249 TTAATGCTTTGTTACTGGAAGCGAAAGAACATCCCAACCCTTGGTTGCTTCTATCAAGTGCCTCTGTCCATGACTTATCCATTCTTCTTGGTCCGCATATACTCTTCCACAAAACCAGCACTTAAACATACACTGAAGTGGTTCAGCTGGTGAGGCTTCCACCACCTGGTAGTTGTTTTTATGGGTCTTTTTCAGTTTCATTTTTAGCATACTTTGCTTTTTTGCTTGGCTTCCTGTCTCAGCATTCTGAAGAGTAAGACGCTTTCGGTAACGTTTGACACCAAGACAACTACTTGTCCTTTCTGACAGAACTACTTTCAGGACATGACCTTTATACTTGTTGATAGTCTTCATTACATTAATTATCTCTGGCGTGTCAACATCAGGATGGTTGAGTACCACAACTGGCTGGTTACGACGAGGGCATTTAATCAACTGATTCATTCTCAGAGGGACAAGCCGAAGACGTCTTGCTGTCAATAGATACGACATGTC---AGAACCTGAACTGGTTTCCGACTGTGTTCTTGTTTTTCTCTTTGGAAGCTCCCTGTAACCCACTTGTTTTACCTTATTTTTGGGTCCTTGTTGACTTTTTGAATAGTGTTTGCTTTGCTTGCTTACATCACCATTTTTCTGATAT-GGTACAA-----CAGTTCGCTTGCTACTAGTTTTA---GCATTCATCTCTCGCTTTGGTCTTTGCCTGAGTGAT------ATATTTCGGGATTGAGTATGTGGATCACTCTGATTAGGCAAACATGGCAAATTACTGCTAAGTT------TCTCAGAAACACTGACGGGAACTGGACGAGGCAGAAGCATCTCGTTGCAA--TATGAAGAAGGAGCTGATGCTTCACTCATCTTTTCTATTCCTCTGGAGTTTTGACTGCTAGCAGCATTGAGCACTCTCAGCACTGTCCCTTTGGGGATAAACACTGGAGAAGCAACATTGGAATTTTTAGTCACCCTGCTTTTAGATGTTCT------------TGCAAA---TGTAAGTAGCTGCTCATTACTGTGTTCATTACTACCAATTACATTACTTCCATC--------------GTGCACTTGAGGGAAAGACATAGCTTGTTCCAACCCAGTGGCACA--GCTTGCTGAATTTTCCTGAGGGAAGTGCATCTTTTTA-------CTAGAAGCTTGGCAT---------------------CTCAAAGGCATAGAT------TTCATGTTAGATTCAGCAGCAGACATGAGCTGAGCAATTTTTCTACACAGCAACGTTGTTGACTTCTTATTGCGTGTCGTATCATCCCATCTGATGCTCTCTGGAACATTTGCAGCCCCAGAGCTAAGAGAAAATACAGATGAAATAACAGGTCCCTCAAAAGGATTGTTTTTATTCTCCATTTTCTGTAGTTCTAGTGATT-----CCAGAAGAAGATTATTTTTTTGACTTACAGTCT-CAGCTTTCTTTACTTTGCTAAAACTAAAAGTCATGTCCTCCCAAGGTGAAGTTTTAGTAACA-TGAAAGTTTTTTTCTGCTTCAGAACATATAACAGGTTTTCTATCAAAACCCTTAGCAGCTAAAGGTGTTTCTGCAGA---GTTGACTATCGGACTCCTACATTCTTTGTCATCCCTCTTTAGTGGAAAAACATCTTTTTGTTTAAGGA---------------------CAGCAGAAGAGTAGAAATTTTTGCTCCCCTGAGTAGTCTTTACTGAATTGTTCTTGGAACTTTTATCTTCAG------AAACAGCGGCAGTCTTTGGACGAGATGTATTCACACCTTCTTCATAACAATACAAATCATAATGTAAGTTATTTTTTCCATCCGCTTCCCACTTGGGTGATTTAAGATCACATTTTTTTTCAGTACTATTAGTCACCAAAGACTGAGAACAAAGTTCTATAACACCTGAACGCACATCAATACCTTTCACCAAATGAAGGCGTAATTTTGATGAATCCTC-----TTTCTGAATTGATACAGAGTT----ACAGTC-TGAGTACTGGGAATCAGATGAATAAAGATAGTCAGA----ATTCTTGTCATACTT----ACTGTCT---AAATTAAGCTGG----TTACTAATACTGGATAACTTGTCTACATTCACTTCCATGGTTAGTAACTCATTTGAAGATACAGATGGTTTTTTTCCTTCTGCAGTTCGCTCTGTACCTTGATTCTCAAGTCCCAACGCAGCACAGTTCACAGGCCTGCAAGCTGC------------TTCTTTCATAGGAATTAGTTTAAGAACCAGCTGTTGAGCTCCGTTCACTATTTTAATTTCTACTATCTGAGCTAAACAGTTAGAAGGAACTACAAGTTCAGATGGCGCAATTACGGTTAAAGGCATTCCAGGTTGTAAAGGCTCCATTTTGGGGGAATAAACCTCAACTTCTACACTCTGATTCTCACACATGCTTATTTCAGATGGCTC---CAATATTGTTTTATTCTGGATTGAAGCTGCACTGATGCTACATTCTATATCATGAGATGAAGAGACTATTTTAGTCGCTTTATCTGGAATCTCAC---AAGTGATATTTGAAGACGAATTTGAAAGTTCATTCTGAAAAGTAATTTCTTCATATTTCTGCTTTTC-AAATAAAGTGCTCTGACTTGGTAGACAAGACTTCTTTTGCTGACGTTTTATGCCAGTATTTGACAGCCGTTTT---TTGGGCGCTTCATGCACTCTTCTTGTATGTTTCACTATATAGTCATGCCTAACAGCACCATAATCACAGTATTCACACTGATACGGAAAAGTTCCAGTGTGCTTCACCAAATGTCTCTGGAACTCACCTTTGGTGTAAGATATATAATTACAATAGGAACAAATAAATTTAATTTCTTCATGTTGACTTACATGCTTTTTATACTGCAAAGGATCCTTCGTTGAAAATCTACATTTATCACAGTAGTATTTACCGGGCAAAAAGTTTTTAACTTTAAATGCTTTCTGTTTTTTTC----TCTGATAAGTTTTCTCATGT-TTTTCAAAGTCTATGGCATTGGCACCTTCAGGGACAAAATGGAAA---GCAGGCGATGTAATATGACTGCACATCTTGCAGATGAAGTTTTTGTCTTCAGCCCACCCAAGTTTCTTATGCTTTTCT--AAATCTTGCTTCGAAATTTTCTGGATATTTCTGCATTTCATGCAGCTTATCAATGA-CAGCTTATTATTCTCAGCCTCAGTGCCTTGGTAACAGTAGTTCTGATCATCATCACCATTTGACGGATTTGATTTATCTTCAAATGATTGCTTTGGAGATGTAGTTAAGGAATTATTTTTATCATTAACTTGGCCAGGGTACAATCTTGGTAGAATTTCCCTCATTTTTTTCAACTGCATTTCAGAAGA ...x.xx....::x:....:.--..............:.::.:..............:....x:..x........:.....:.....:.....:x....:.x..x:....................:.:......x::x.:x...x.x..::...xx.....:....................::::.....x...........:.:...xx.....:....x::...:..xx..x::..x........:x::..x..:..:x:x:.:.:x...:...::..x..x::..xx..x.....:.....:.:...x.....x.......x:.....:..:..:..x..x::......:.....::.:.::.......x...x........:.....x.::..x.::...........x.....:..:..:.............:::x::.x:xx.xx.:x..:.xx..x:.:.....x::.x:x.:.xx:..x:x:..---:::..xxx::..:.x...x.x:..x:..-..........:::....x:--------.::x:........x:::......:.:xx.x:xx:xx.....:.x...x:xx..:.x.:......::...xx....:::..:::..x.:.-x:.....-----.....:x::.::x:x.:..x:..---:..x:xx.....:x::.::..:.xx...xx..x.:.------......x....:xx.x:xxx...x:.x..:.x.:.xxx:...x::x.:..:.-----..:...:------.....x.::-:.x:.xx........x:xx:x:.:xx.:x.:..::.....--....xx..-----.x.:........x::.xx::.....xx:x:x..x:..:.------:..x:.x...:..x..:....:...x.:............x........x.x:.......x:.xx..::.:.:...:........:.x.x.:..------------......---..x.x:..x:..:.x..x.x.:x.:.xx:..:.....:.x.:.::..:x:...:--------------.x.:..:..x..:.x:.x..x::.:x..x-------....:...:--.x..x..x:.x.x:.:.x..:.----.:.x.....x.-------:.x..x..:..x.x.---------------------:.::...x..x....------...x:::x:..:...---------..x.:......x..:.....:.:..:..::x:x:.......:x.x..:x::..:.x:::..:...::.:....:...x..:......x...x:........x...........x.....:..:..x..x..x...xx..x:.....xx.x:.:..x:xx....x..:...:.:x.::.-----....---------::.x..xx..::..:xx...-...:.x.x....-.x..:x..x...x.xxx.:....-----::..:x...:.:.x:x:x...-.x:..::.x::..x..:.:.------.x.:x.x....x...-..xx:x::.:..x:..xx:..:x:::..:.:...:---:......x.---...:x..x....:xx.....::::x:...xx..x..x.x::.:....x.::.::..---------------------.....:.x.:.-..x..:.x:..------....------:.....x:.x:x.:.-----...::.::.....------.......:..xx.x.x....x:..:xx.xxx::..x..:.-----..x.x...----------....:x:.:.x...::.xx::.---------:.:..x.xx.::..x..x...-------------.x..x..x.::.:---.::..x:x........:-----..:.::..x..:.x.x::....------....---------------.......-----....:.....:..:x..::..----.:x..:-..x::...:.:.x.::.xxx......-..x:.x...----.::.x.x...:.:..----:....:.---..x.x...x.x.----:..::...:.:x:xx.::..x:.x......x.x..x.:x..:...:...:xx..xxxxx.:....x:..x:....:...x.x..x..x:x:.:x.x:...xxx:.x:.x..:.x:.xx:.x.x.x:..xx.---...x.x....x.------------.....:..xx....x:.....x.....x.....:..x.:x..:..x..x.::..x.:x....::.x...:...........x.x...:..x..x.....x.x...:....:x..x..:..x.....x..x..:..x.x...:..:x..x::.....xx.x..:..x.....x...:.:.x:......x.:.x.:.x.:....xx......---..:x:.::.......:x.:..xx..:..:..::xx.x:x::....:x.xxxx.x..:.:.x:.x.:x..x..:xx.::...:...xx.x.:x..:---:..x..x.::...x:::x::.:...xx::.:...:.....x...:.::x.xx..-.xxxx......x-..::xxx.x.:.:..x:...:x:xx.x:.x::.:...x...xxx.:..x:::x...:x..x:x::.......:---::x.x.x:......:.....::.:..:.....x..x.....:....x:....:.........:.....:..:...........x.....x:.x..x.....:...........:.....:.....x.....x..:..x..x..:..::.:..:.::........:........:..:..:......xxx:::........:.......:x..:.....:..x..:....x............:........:..x...xx......::.x..:.....-----.:..:.x..xx.----::...x........xxx.x.-...:...x:.xx:.x...:...x.::x.::xxx........:...---.x...x.x..:.x::x.:......xxxxx.....::x.xx.x::...:--------------..:.:.:.:.::....--........xxxx..:..:..x..:.:.:..:....:..::::..-:x..x.....:-..x.x.:x:.x:...x.....x.x......:..xx.:x:.x.:..xx.x..x.xx.:.....:.x..xx..x.::..:xx..xxx.::..:..x..x..::.:..:..........x.::::.:..x.xx..xx:..x...:.:::x:x..xx...x...:....:..----.x.........x:..:. 21M2I472M3D28M1I19M8I89M1D7M5D23M3D36M6D52M5I7M6D9M1I40M2D8M5I39M6I94M12D6M3D54M14D29M7I9M2D22M4I11M7D15M21D15M6D15M9I178M5D4M9I20M1D12M1I23M5I21M1D20M6I15M1I35M3D9M3I56M21D11M1I11M6I4M6I15M5I13M6D40M5I8M10I22M9I21M13I13M3I17M5I22M6I4M15I7M5D21M4D6M1D26M1I9M4D15M4D7M3D12M4D131M3I12M12D210M3D95M3D54M1I12M1D73M3D278M5I12M4D20M1D45M3D48M14I16M2D44M1I11M1D168M4I17M 1908/3063 62.3% 3249/94230402 0.0% 372/3063 12.1% -70766768 -23463634 +3300 chr4 + 190214555 10468544 10468543 10468616 73 TGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAAGCAGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........:.::........x.xx.x...x::........::.:.:x:xx...:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -65564661 -28665741 +3207 chr4 + 190214555 10477882 10477881 10477959 78 TGGTACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:..:.--.:..:.:...........::........x.xx.x...x.::.......::.:..x.xx:..:..:.. 9M2D67M 53/76 69.7% 76/94230402 0.0% 2/76 2.6% -65555320 -28675082 +3163 chr4 + 190214555 10479819 10479818 10479885 67 AAGACTCTGTCTCATTAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548410 85548409 85548473 85548410 85548409 85548473 64 AAAGCTCT---TCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..::....---...xx..........:.:x.....:...:.:.:.::...:..........x..... 8M3D56M 49/64 76.6% 64/94230402 0.0% 3/64 4.7% -75068591 -19161811 +3214 chr4 + 190214555 10479835 10479834 10479887 53 AAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548421 85548420 85548473 85548421 85548420 85548473 53 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ............:.xx.....:...:.:.:.::...:..........x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -75068586 -19161816 +3440 chr4 + 190214555 10480557 10480556 10480623 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -65552654 -28677748 +3360 chr4 + 190214555 10493178 10493177 10493260 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -65540019 -28690383 +3177 chr4 + 190214555 10508976 10508975 10509109 134 GTGTGCCTATAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGCGGTTGCAG----------TGAGCCGAGATCGTGCC-----ACTGCACTCCAGCCTGGTGACAGAGTGAGACTCGGTCTCAAAA chr4 + 94230402 76033204 76033203 76033350 76033204 76033203 76033350 147 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGT-GTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAA ...::.x.:....:.:.........::........x.xx.x...x.:........::.:..x:xxx..:..:..----------::...x..x:.-.....-----x....x.-.....x.......x.x:x::::..:..xx...x.. 74M10I11M1D5M5I7M1D35M 88/132 66.7% 147/94230402 0.0% 17/132 12.9% -65524228 -28706174 +3039 chr4 + 190214555 10513191 10513190 10513242 52 TCTGTATTTTTTGGATTAATTTTTAAAAAAACACTTTAGAATCTGGAAACAT chr4 + 94230402 24807828 24807827 24807879 24807828 24807827 24807879 52 TCTGTTTTTTTATCATTTGTTTTTAAAAGAACACTTTAGAAACTGAAAGCAT .....x.....xxx...x:.........:............x...:..:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -14294637 -79935765 +3429 chr4 + 190214555 10522450 10522449 10522516 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTAAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...x::...:.......:..x.xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -65510761 -28719641 +3163 chr4 + 190214555 10524029 10524028 10524096 68 AGAAAGGAAGAAAGGAAGGAAGGAAGAAAAAACAAAAGAAAGAAAGAAAGA--AAAGAGAAGAGGAGGAG chr4 + 94230402 94050835 94050834 94050904 94050835 94050834 94050904 70 AGGAAGAGGGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAAG ..:...:::....:......:...:.....:......::x:..x:x....:--.:........:..::.. 51M2I17M 48/68 70.6% 70/94230402 0.0% 2/68 2.9% -83526806 -10703596 +3157 chr4 + 190214555 10524031 10524030 10524099 69 AAAGGAAGAAAGGAAGGAAGGAAGAAAAAACAAAAGAAAGAAAGAAAGAAAAGAGAAGAGGAGGAGGAG chr4 + 94230402 31093035 31093034 31093103 31093035 31093034 31093103 69 AAAGGAAGAGTTAAGCAGAGGAAAAGAAGACAGAAGAAGTAAAGAAAGGCAAGAGGAGTAGTGGAGCAG .........:xx:.:x::.....:.:..:...:.....:x........:x.....:..x:.x....x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -20569004 -73661398 +3249 chr4 + 190214555 10529934 10529933 10530010 77 TAGTCAAGTTAAATAGTAGTATCTCTTTTATTACCTCTCTCCCTCTTTCTCCTTCCTTTTTTCTTTTCCTTTTTCCT chr4 + 94230402 87791813 87791812 87791889 87791813 87791812 87791889 77 TGGGTAAATTAGCAAACAGCATCACTGGTGTCATCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTT .:.x:..:...:xx.::..:...x..xx.:.:.:...:x..:.:..:::....:.:......:............:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% -77261879 -16968523 +3023 chr4 + 190214555 10529975 10529974 10530018 44 CCTCTTTCTCCTTCCTTTTTTCTTTTCCTTTTTCCTCCCTCCTT chr4 + 94230402 52972980 52972979 52973023 52972980 52972979 52973023 44 CCTCTTTTTCCTCCTTTTTTTTTTTTCCTCTCCCCTTTCTCCTT .......:....:.:......:.......:.::...::...... 44M 35/44 79.5% 44/94230402 0.0% 0/44 0.0% -42443005 -51787397 +3152 chr4 + 190214555 10530000 10529999 10530069 70 TCCTTTTTCCTCCCTCCTTCCCTTTTCCTTCCTCCCTTTCTTTCACCTTCTCTGCCCCCTCCTTTCATTC chr4 + 94230402 60843985 60843984 60844054 60843985 60843984 60844054 70 TCCCTTTCTCTTGTTCCTTTCCTCTTGCTCCCTCGCTTTTTTCCATTTTCTCCCTCCTGTCCCTTTGCTC ...:...::..:x:.....:...:..x..:....x....:..:..::.....:x:..:x...:..:::.. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% -50313985 -43916417 +3116 chr4 + 190214555 10535210 10535209 10535287 78 AAAGAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGGAAAGCCATAGTTAGG chr4 + 94230402 29014673 29014672 29014750 29014673 29014672 29014750 78 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGA--GAAAGAAAAAATGGAACCCTTTGATTAAG ....x...:..:--.x....:....::.:.::::.....:...:.....--................xx.:x.::...:. 12M2I35M2D29M 55/76 72.4% 78/94230402 0.0% 4/76 5.3% -18479463 -75750939 +3047 chr4 + 190214555 10537570 10537569 10537663 94 TTCCTTCCTCTCTTCATCCCTCCCTCCCTGTCTTTCTCCCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895609 32895608 32895702 32895609 32895608 32895702 94 TTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ..:......x.:..:x:.:x..x:..:....x...:::x..xx:...x..xx:x...::::x:........x:.x......x.....:...... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -22358039 -71872363 +3388 chr4 + 190214555 10537609 10537608 10537728 120 CTTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGT-TTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.::.....:..:::xx.x.-.........:....:.:x..::.:.x....xx.....x.:.:------..x...::.:x.xx:...:..--..:..:..:..........:....:.x.:. 24M1D42M6I21M2D30M 78/117 66.7% 123/94230402 0.0% 9/117 7.7% -53159508 -41070894 +3570 chr4 + 190214555 10537621 10537620 10537748 128 CTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTT-TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..::.xx.x...-.:.....:....:.:x..::.:.x....xx....--.x:...xxx:.:..x...::.:x.xx.......:..:--.:.::...............:.x... 26M1D34M2D37M2D26M 82/123 66.7% 123/94230402 0.0% 5/123 4.1% -53159496 -41070906 +3152 chr4 + 190214555 10537640 10537639 10537834 195 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----------------TTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCT---------TCCTTCCTTCTCTTGTTTGTTCTTTCTTTTCTTTTCTTCTTCTTTTCCTGTGCTGT chr4 + 94230402 67728277 67728276 67728490 67728277 67728276 67728490 214 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGG------CTCCTTTTTTTTCATCCACCTCCTCCTAAACTGT .....x:..x....:....xx:.::..:x.......----------------...:.:..:.x.x:.....::x:x..:..:...x:.:x...x.:x:.x:.:..x::x:.:.:..:x....:.x.:::xx.......:::x..:::...x..x:---------...xx:.:..:....x------:.:.....:...:x.:.x:..::....:x:.... 36M16I103M9I16M6D34M 109/189 57.7% 214/94230402 0.0% 31/189 16.4% -57190637 -37039765 +3543 chr4 + 190214555 10537644 10537643 10537826 183 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTT---CCTTCCTTCCTTCCT-----TCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCTTCCTTCCTTCTCTTGTTTG--TTCTTTCTTTTCTTTTCTTCTTCTTTTCC chr4 + 94230402 67728277 67728276 67728469 67728277 67728276 67728469 193 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTC .....x:..x....:....xx:.::..:x.......x.x...---...:::..::....:-----:.....::x.x.....::..x:.:x...x.:x:.x:....x::x:....:::x.:.::.x.:.:xx:....:.:..x.:.::...x..x.::::x..--.:.xx..:.::...xx..:...:....:. 42M3I15M5I97M2I29M 105/183 57.4% 193/94230402 0.0% 10/183 5.5% -57190633 -37039769 +3062 chr4 + 190214555 10537658 10537657 10537740 83 TCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:......:::.:..xx:.x..x::..:......:...::...x.....x..xx:.x..:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -46834369 -47396033 +3062 chr4 + 190214555 10537662 10537661 10537744 83 TCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x:.:......:::.:..xx:.x..x::.........:...::...x.....x..xx::x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -46834365 -47396037 +3284 chr4 + 190214555 10537666 10537665 10537749 84 TCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.......::..x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x.:xx:.x...:.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -46834361 -47396041 +3184 chr4 + 190214555 10537674 10537673 10537757 84 TCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCTTTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:......:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx..x.:.:.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -46834353 -47396049 +3846 chr4 + 190214555 10537679 10537678 10537785 107 CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTT-----TCTTTCTTTCTTTCTTTCTTTCTTCCTT--------TCTTTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCTTCCTTCC chr4 + 94230402 2692248 2692247 2692365 2692248 2692247 2692365 118 CCTCCTTCCT--CTTCCTCCATTAATTGCTTTCTGATTAGTCCCCATTTCTTTCTATATTTTCTGCTTACAGTGCATTTTTTTCTTTGTTTCTTTCTCCATCGTTTCCTTCTTGCTCTCC .:........--......:.x..xx..x......x-----..:::x.........x.x...::.x...--------.:.........x..........:x..x:.......:.x.::... 10M2D23M5I28M8I44M 79/105 75.2% 118/94230402 0.0% 15/105 14.3% 7845431 NA +3434 chr4 + 190214555 10537697 10537696 10537835 139 TCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCTTCCTTCCTTCTCTTGTTTGTTCTTTCTTTTCT----TTTCTTCTTCTTTTCCTGTGCTGTG chr4 + 94230402 48874869 48874868 48874999 48874869 48874868 48874999 131 TCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTT--TCCTTTTATCTCCTACTTATCTTTCTTTATCT--------ATTGCTTCCTTCTCTTGTT--TTCTTTATCTTCTAATATTTATATCTCTTTCCCTTAACAGTG ..::.:....x:x.x.:.....:.x.xxx.....x...--......:x.:.:..x::.x.......:.x...--------x..x...............--......x.:....----...x.x::.....:...xx:.x... 38M2D32M8D19M2D13M4I25M 90/127 70.9% 131/94230402 0.0% 16/127 12.6% -38337172 -55893230 +3118 chr4 + 190214555 10537723 10537722 10537821 99 CTTTCTTTCTTTCTTCCTTTCT-TTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCTTCCTTCCTTCTCTTGTTTGTTCTTTCTTTTCTT-----TTCTTCTTCT chr4 + 94230402 73066126 73066125 73066230 73066126 73066125 73066230 105 CCTCCTGTCCTCTGTCCTTGTTGTTCCCCTTGTTTCTTACTCCTTCTGTTCCATTTTCCCCTTTCTGTCTGGTGTGTTTTATCTTTTTTTAAAAGTACTTTTTCT .:.:..x..:.::x.....x:.-..::.:..x......x...::...x....x.::.:..:.:::.x...x..x....:.x......:..-----.x...:.... 22M1I67M5I10M 66/99 66.7% 105/94230402 0.0% 6/99 6.1% -62528403 -31701999 +3080 chr4 + 190214555 10541074 10541073 10541143 70 CATGGTGGCATGCACCTGTAATCCCAGCTACTCACAAAGCTGAGGCAGAAGCATCACTTGAGCCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x....:.:.........::x..:......x.xx:x.x.x.......:.....:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -65492123 -28738279 +3003 chr4 + 190214555 10542623 10542622 10542689 67 AATGTGCATGTGTATATGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325490 27325489 27325556 27325490 27325489 27325556 67 AATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ....:.:...xx.:...::::x..x::x.:x:.............:.........::..::...... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -16782867 -77447535 +3169 chr4 + 190214555 10544682 10544681 10544771 90 GGGCAAAAGTCCTCAGGTGGTGTCAGTTCATTTTTCTGTTGCTTAAAACAGAATACTTGAAATTAGGTGATTTTCTAG-------------AAATTAAGTAAG chr4 + 94230402 67426904 67426903 67427006 67426904 67426903 67427006 103 GAGCAATGGCTCTGAGGTGACGCTATTTCATTTTTCTTTTGTTTAAAGCTGAAGCCAAGAAATGCTGTGTTTCTCCAGCATATTGGCCTACAAATCAAGCAAG .:....x:.::..x.....::.::.x...........x...:.....:.x...xx.xx.....xxx...x..:..:..-------------....:...:... 78M13I12M 63/90 70.0% 103/94230402 0.0% 13/90 14.4% -56882222 -37348180 +3502 chr4 + 190214555 10563776 10563775 10563849 74 GTGCACCTGTAATCCCAGCTATTCAGAAGGCCGAAGCAGGAGAACCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......:.:::.....:..:x.xx.x...x...........:.:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -65469428 -28760974 +3241 chr4 + 190214555 10571302 10571301 10571362 61 TTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTT----TTTTTTTTTTTTTTTGAGACAGAGTT chr4 + 94230402 81934681 81934680 81934745 81934681 81934680 81934745 65 TTTTTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTTTCCCCAGAAAAAGTT .....x............:.....xx........x----............:::x...x.:.... 35M4I26M 50/61 82.0% 65/94230402 0.0% 4/61 6.6% -71363379 -22867023 +3009 chr4 + 190214555 10571303 10571302 10571343 41 TTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTT chr4 + 94230402 42595725 42595724 42595765 42595725 42595724 42595765 41 TTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT ....x...............::x:................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -32024422 -62205980 +3107 chr4 + 190214555 10571308 10571307 10571353 46 TTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 42595727 42595726 42595772 42595727 42595726 42595772 46 TTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTTCCCTGGA ..x.........:..:...:...................:::.x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -32024419 -62205983 +3119 chr4 + 190214555 10571314 10571313 10571405 92 TTGTTGCTGTTGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTTG-CCGCCCAGGCTGAAGT-GCAAGGGTGCTATCTCGG chr4 + 94230402 4853197 4853196 4853290 4853197 4853196 4853290 94 TTGTTGTTGTTACTTTTTTTTCTTTTTTTCTTTTTTTCCAAAAAGAAAATGGATGGAGTCCTCCTATGCAGAAGTAACAAGAAAACTGTTTTGG ......:....:.........:.......:.......:x.:.x...:xx.x.x.xxx.-..x..:.x..x.....-:....::x:..:.:.:.. 58M1I16M1I18M 64/92 69.6% 94/94230402 0.0% 2/92 2.2% 5718117 NA +3029 chr4 + 190214555 10580598 10580597 10580676 79 CATTTGTGTCTTAGTTTTTGGCAAAAACATTTAAAAAGTAAAAAAAAATAAAATAAAAATTAAAAAATTAAAAATAGAA chr4 + 94230402 82629016 82629015 82629094 82629016 82629015 82629094 79 CATTTGTCTTGCAATTTTTGCCAGTCTCATTAAAAAAAGAAAAAAAAAAAAGGCAAAATTTGAAGTATGGAAAAGAAAA .......x.:x:.:......x..:xxx....x.....:x.........x..:::....x..:..:x..x:....x.:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -72048418 -22181984 +3604 chr4 + 190214555 10605688 10605687 10605770 83 CGTGGTGGTGCACACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......::..........::........x.xx.x...x.:......x....:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -65427509 -28802893 +3101 chr4 + 190214555 10610016 10610015 10610065 50 CTTTTAAATGAATGCTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 71484237 71484236 71484286 71484237 71484236 71484286 50 CTTCTAAATGAAGTCTGGTTGTTTTTGTTGTTCTTTTTTTTTTTTTTTTT ...:........xx..x...x.....x..x..:................. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -60874221 -33356181 +3508 chr4 + 190214555 10616752 10616751 10616924 173 TTTATAATAAAGTTGTGTGTGTATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATATACACGCAT---TTTTTTTTCTAGAGAATTG--TTCAACATTTACTAAAATTTGCCAGAACACCACTGGCTAACCCACCTTAAA---GCATTGCCATTTATAATGTCTGT chr4 + 94230402 85834528 85834527 85834707 85834528 85834527 85834707 180 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTAC-AAATTCCACTTGAATTCTAAAGGTTGTATGAACTTTAACTCTCAGTGCCAATTAAAACATCTGT ...x.x..xx.x......x...:.:.:.........:.xx..:..x::...:....:..x...:..:.x...:...:...---:x:x.xx:..:.:.....x--...x::..x...-...x.:::.:x...:x.:.xx..:.:xx:x.x...x..---x..x.....x...x..::..... 80M3I19M2I12M1D38M3I23M 109/172 63.4% 180/94230402 0.0% 9/172 5.2% -75217776 -19012626 +3017 chr4 + 190214555 10676043 10676042 10676106 64 AAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATGTGTGTGTGTGTTTGCACACACAT chr4 + 94230402 79265515 79265514 79265578 79265515 79265514 79265578 64 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT ..x..............::........xx...:.:.x:..::::.....:::x:...x...:.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -68589472 -25640930 +3048 chr4 + 190214555 10687440 10687439 10687498 59 ATGGAGAAAAAAGAGGAGGGAAGAGGAGAGAAGGAAGGAAGGAAGAAACAAAAGAAGGC chr4 + 94230402 3574031 3574030 3574089 3574031 3574030 3574089 59 ATGCAAAGAGGGGGGGTGGGGAAAGAAAAGGAAAAAGGAATGAAAAAATAAAAGAAGGC ...x.:.:.:::.:..x...:.:..:.:..:.::......x...:...:.......... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 7113409 NA +3053 chr4 + 190214555 10778124 10778123 10778192 69 GGAGAGTGTATGTGTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT ....::.x.:.:..:...:...:......x.......:....x.x::..:.x:...:.xx.x....:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -67068640 -27161762 +3017 chr4 + 190214555 10786561 10786560 10786615 55 GTTTTTTTTTTTTTTTTTTTGCTTTGTTCTGTTTTTTTTTTTCTTTTTTTTATTA chr4 + 94230402 28926597 28926596 28926651 28926597 28926596 28926651 55 GCCTTTATTTCTTTGTTATGGCTTTTTACTGTGTTTTTTTTTCTTTTTTTTTTTA .::...x...:...x..x.x.....x.x....x..................x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -18140036 -76090366 +3149 chr4 + 190214555 10787222 10787221 10787442 221 TGACAACGTATGATAGCGCTACATTGTCAGCCAAGTCCTG------TCATTACT-----TCTAGAGCACAGATGCTTTGCTTTCTTTCTG-----TTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTT chr4 + 94230402 69568052 69568051 69568273 69568052 69568051 69568273 222 TGCCAACATATGACTATTTTAGGTT-TAAACAAAGTCTTGCTTTTTTCACTAATAATATTTTAGATTTTAGAT-TTCTGCTATTTTCCCGGATAATTTTGTTTGCCTCTTATCATCCTAATGTCTGTTCCGTTACTACAGTACTTTCCTTGCTGCTC-----AGTTATTTCCTCCTTTGTCTCTCCTCTGTCTC--------TTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ..x....:.....:x::x:..x:..-.x.:.x.....:..------...:..x.-----.:....x:x:....-:.:....x.:..:.:.-----....x...x::....x..x.:..xx:x.::x...:x.:x..x:xx.x.....:..x:.x..:-----xx..x....:.:....x.:...:..:.x.:..--------....:..:x:...xx.......:...:...:.... 25M1D14M6I8M5I14M1D16M5I62M5D32M8D35M 131/206 63.6% 222/94230402 0.0% 31/206 15.0% -58780830 -35449572 +3834 chr4 + 190214555 10787272 10787271 10787458 187 TAGAGCACAGATGCTTT-GCTTTC-TTTCTGTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCT-TTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCC chr4 + 94230402 27978779 27978778 27978961 27978779 27978778 27978961 183 TATGGCCTAGTTGCTTTTGTTTTCATGTCTAATTTGTTGGTTTTTTTTTTCTCTTGCTACTTTTGTTGCACTGA-------TATGTTTTTAGTTATTTTTCTGTGCCTTAGCTCTCTTGACTTTCCTTTCCTTCCGTCTATGTGTTTTTTCTCTATATATGCCTTTTTTCCCCTACTTTCTCCTGTTCCC ..x:..x:..x......-.:....-.x...:x...x..xx...:....:.:....x..x::...x..x.x..xx-------.x.x.:...xx..x...:.:.x.x:...xx:.:::..xx::..:.........:x...x.x.x..........x.-.x.x.:..:....:::.x....:.:..x..:.. 17M1I6M1I49M7D75M1I33M 116/180 64.4% 183/94230402 0.0% 10/180 5.6% -17191507 -77038895 +3778 chr4 + 190214555 10787328 10787327 10787496 169 TTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTC---TTTCTGTTTTTCTTTCTTTCTTTTTCT chr4 + 94230402 3415300 3415299 3415469 3415300 3415299 3415469 170 TTCTTTCTGGAGCTGTCTTTCCTT--TCCTATTCTTTTTTCATTCCTAGTCCTATTCCTTTCACATTCCTATTCAATTCCTATTCCTTCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTTTGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCTCCCCACCCTTTGCT ........xxxx..x......:..--.:..x.::..:....x...:.xx.:::x...:..::x.x...:.x:::xx..:..x..:...:..xxxxxx..::.........x.:.:......x...:.:......xx:.:x..---::...x.:.:...::.:x:.:...x.. 24M2D116M3I27M 101/167 60.5% 170/94230402 0.0% 5/167 3.0% 7372028 NA +3730 chr4 + 190214555 10787330 10787329 10787447 118 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTT------TCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx....:x.------:....x...:..:x:xx.::..:.:..:.:::...........:......x... 13M1D50M6I54M 77/117 65.8% 123/94230402 0.0% 7/117 6.0% -52909787 -41320615 +3548 chr4 + 190214555 10787332 10787331 10787503 172 TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTT chr4 + 94230402 72471345 72471344 72471512 72471345 72471344 72471512 168 TTTTTTCTCTTACAGATTTTCTT-CTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCC---CTTGCTCCCTCCCTTTCTGACTCCTTT ..:........x.xxx:......-..xxx......x:..x::...:.:....:.:.:......:...:...xx:.x:x.:.:...x.:x.:x.x.x..:..x:x:.:x...x.x.x:..x.:x..xxx..:.:..:....:.---:..x..::..::....:.xx...:... 23M1D118M3D27M 101/168 60.1% 168/94230402 0.0% 4/168 2.4% -61684013 -32546389 +3625 chr4 + 190214555 10787341 10787340 10787574 234 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTC-------TTTTTTCTTTCTTTCTCTTTCTCTCTTTTTTCCTTTCCTTTCTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTT chr4 + 94230402 67728277 67728276 67728515 67728277 67728276 67728515 239 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCC--TACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTT .....x:..x....:....xx:.::..:x.......x.x...x:x::::.:...:..:..:.x:x:.:..:..x.x......:..x:::x.:.x..x..x:.:.--.x:.x:...:.....::...x:.::xx.x:...:..:x:::...::x..x.:.-------.::xx..:.:.:..xx..:::.:.:...:x...x:::.:.:..xxx.:x......xx..::.:x.:xx:...... 104M2D53M7I75M 125/232 53.9% 239/94230402 0.0% 9/232 3.9% -56940936 -37289466 +3155 chr4 + 190214555 10787369 10787368 10787480 112 TTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTT----CTCTCTTTTTCTTTCTTTCT---TTTTCTTTTTTCTTTTT----CCCATTCTCTTTCTTTCTGTTTTT chr4 + 94230402 83326934 83326933 83327056 83326934 83326933 83327056 123 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCTGAAACTCAGTCCTCACCTCTGCGTTTTT ..:....x..:x::x::..:x.......xx..::........:.....:x.----....x..:..x:x.:.....---........:.:....:.----.:..x..:::x:..:.x:...... 51M4I20M3I17M4I24M 75/112 67.0% 123/94230402 0.0% 11/112 9.8% -72539565 -21690837 +3478 chr4 + 190214555 10787409 10787408 10787558 150 TTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTT--------TTCTCTC--------------TTTTTTC------------------TTTCT------------------TTCTCTTT--------CTCTCTTTTTTCCTTTCCTTTCTTTTCCTTTCCTTTCCT chr4 + 94230402 14546079 14546078 14546294 14546079 14546078 14546294 216 TTTTCTTGCCCAGCTCTCATCTTTTCTTTCATCTGTCTCTTCTTTTTTTCCTTTCATCTGGTTTTTGCTTCTCTTGCTTTCATTCAGTGGTGTTCTCTCAAAAAGCCCTGCTATGTTTTCTACCAATAAAAATCAGTATTTCTGTGGTTGGAGTAATTATATTTTCTTTATGTATAGCtttttttttttttttttttttttttttttttctttctt .......x:::xx....:x.::........x.:.x::.:..::.....:..x...x::.xx...:..:..:....x.....x..--------.......--------------.x.....------------------.....------------------..:.....--------..:.:......::...::...:....::...:.....:. 84M8I7M14I7M18I5M18I8M8I39M 107/150 71.3% 216/94230402 0.0% 66/150 44.0% -3758670 -90471732 +3634 chr4 + 190214555 10787422 10787421 10787643 222 CTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTT--CTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTTCT---CTCTTTTTTCCTTTCCTTTCTTTTCCTTTCCTTTC--CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTTCTCTTCTTTCCTTTCCTTTCT chr4 + 94230402 38131854 38131853 38132079 38131854 38131853 38132079 226 CTCATTAATTTCCTTTTGAATTCTCTTGACTTTTTTCCCCCCTCTTGCTTTTCCTTTTTTTTCTTCCTGCTTTTTGACTCTCTATTCCTTCTGTTTGGATCCCAGCTCTTCCGACTTTTTCCCAGCTCTCAGAGCCTTTCTTCTTTGCCCACCTCACCTCTCTGTATGCAGTCACACATCTCCTTTGTTATC---TCCATCCCTTCTCACTGTCTTGCTGCTTATCTCT ...x..xx:..:....:xxx....:..xx......:..x::.....x....--..x.....::...:.x......xx....:.x...:....x.:.xxx..:---.....::xx.:...:.::xx:.:..xxxx......--....x.::x...:x...:..:x.x:x:xx:.x:x.x.:......x:.x..---...x.:....:.:x::x....x.:x:.:x.:... 51M2I49M3I35M2I50M3D34M 131/219 59.8% 226/94230402 0.0% 10/219 4.6% -27344432 -66885970 +3202 chr4 + 190214555 10787426 10787425 10787528 103 TTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTTCTCTCTTTT chr4 + 94230402 40367307 40367306 40367407 40367307 40367306 40367407 101 TTTTTTTTTTCTCCTGGATGTTTTTCTGGGACCTGCCTGCTTTCT--CTGTTTAGCATCTGTTTCTGCCTATTCTCTTTTCTTTCTTTCCCTTTCTCCCTTTT ....:...:.:..:.xxx:x.......xxxx..:::::x......--......xx.x.::x..::.x:::x:...:.............:.......:..... 45M2D56M 65/101 64.4% 101/94230402 0.0% 2/101 2.0% -29579881 -64650521 +3699 chr4 + 190214555 10787439 10787438 10787519 81 TTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTT chr4 + 94230402 86491064 86491063 86491144 86491064 86491063 86491144 81 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT .....:......:......xx.x.::.::..:.x.xx...:.........:......:.:.:::::...x.:....:..:. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -75703625 -18526777 +3254 chr4 + 190214555 10787447 10787446 10787536 90 TTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCT---CTTTTTTCTTTC-TTTCTCTTTCTCTCTTTTTTCCTTTC chr4 + 94230402 83326934 83326933 83327027 83326934 83326933 83327027 94 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTC ..:::..x...x.xx...:.x.......:x::::..........:....x:.---..:.x.....x.-...:...x...:.::...:....... 52M3I12M1I26M 63/90 70.0% 94/94230402 0.0% 4/90 4.4% -72539487 -21690915 +3040 chr4 + 190214555 10787470 10787469 10787534 65 TTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTTCTCTCTTTTTTCCTT chr4 + 94230402 51335327 51335326 51335391 51335327 51335326 51335391 65 TTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTT ..:...x...:::x:xx....:x..........x..:.......:.:....::.....::..:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -40547857 -53682545 +3016 chr4 + 190214555 10815528 10815527 10815591 64 AATTTTAAAAAATTCGGCATTCCCTAAAAACAAAAAAACAAAACAACAACAACAACAACAAAAA chr4 + 94230402 61993771 61993770 61993834 61993771 61993770 61993834 64 AATTCCAACAGGATCGTAACTTTCAGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAA ....::..x.::x...xx.:.::.x:...:x.......x.x:...................... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -51178243 -43052159 +3061 chr4 + 190214555 10815561 10815560 10815595 35 AAAAACAAAACAACAACAACAACAACAAAAACCCA chr4 + 94230402 55857704 55857703 55857738 55857704 55857703 55857738 35 AAAAACAAAACAAAAACAACAACAACAAAAACCCA .............x..................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -45042143 -49188259 +3698 chr4 + 190214555 10822894 10822893 10822976 83 CATGGTGATGCATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:....:..--...:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:...:. 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -65210303 -29020099 +3142 chr4 + 190214555 10844191 10844190 10844250 60 AAAAACAAAACAAAACAAAAAACAAACAAACAAAAAACCCAAAAAAAAAACCCAAAAAAC chr4 + 94230402 1580653 1580652 1580712 1580653 1580652 1580712 60 AAACACAACACAAAGGAAAAACGAACCAAAAAAAAACCCAAAAAAAAAAACCCCAAACAC ...x....x.....:x.....xx..x....x.....x..x.............x...x.. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 9263538 NA +3269 chr4 + 190214555 10864195 10864194 10864244 50 TTGCTCTTTCAATGAACAAATGAATAAGAAAAATATTATTATTATTATTA chr4 + 94230402 66346213 66346212 66346262 66346213 66346212 66346262 50 TTGTTCTTTCTATTAATAAATGAACAAAAAAAATATTAGTATTATGATTA ...:......x..x..:.......:..:..........x......x.... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -55482018 -38748384 +3491 chr4 + 190214555 10890942 10890941 10891034 93 TCTTTCATTAATACTAAAATGTTTCAAATTTATAGAGTGGTTTTGTTTTTGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTT chr4 + 94230402 23298656 23298655 23298744 23298656 23298655 23298744 89 TTTTTCAGTGAC-CTGAAGTGCCTCAAGTTC---TAATGGCTTTTTTTACTTTTTTAGTTTTTGTTGTTGTTGTTTTGTTTTGTTCTCTTTTT .:.....x.:.:-..:..:..::....:..:---x.:...:...x...x:x....xxx.................x.x.......:.:..... 12M1D18M3D59M 65/89 73.0% 89/94230402 0.0% 4/89 4.5% -12407714 -81822688 +3047 chr4 + 190214555 10890968 10890967 10891027 60 AATTTATAGAGTGGTTTTGTTTTTGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTT chr4 + 94230402 13960312 13960311 13960371 13960312 13960311 13960371 60 AGTTTTTAGAGTAATCTTGGTTGGTTTTGGTCTTCTTGTTGCTGTTGTTGTTGCTTTTTT .:...x......::.:...x..xxx...x.....:......:..........x:..x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -3069344 -91161058 +3037 chr4 + 190214555 10890991 10890990 10891047 57 TGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTGACAGAGTCTA chr4 + 94230402 61549806 61549805 61549862 61549806 61549805 61549862 57 TGTTTTGTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTTGGCTTTTTGTTAGTCTCTA ........:..x...............xx....x....xx:......x:..xx.... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -50658815 -43571587 +3089 chr4 + 190214555 10890997 10890996 10891072 76 GTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTGACAGAGTCTAGCTCTGTCACTCAGGCTGGAATGCA chr4 + 94230402 14999529 14999528 14999594 14999529 14999528 14999594 66 GTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTTGA-AGATTGAAACACT---------GCTGGAATACA ..:.................:..x.......x...x......-...x.xx.:.x..---------........:.. 42M1D13M9D11M 55/66 83.3% 66/94230402 0.0% 10/66 15.2% -4108532 -90121870 +3089 chr4 + 190214555 10913023 10913022 10913071 49 TTTTTTTTTTTTTTTTTTTTTCTTCAGTATTGTTTGTTGATTTCTATTT chr4 + 94230402 39881718 39881717 39881766 39881718 39881717 39881766 49 TTCTCTTTTTTTTTCCTTTTTTTTCAGTACTCTTTGTTAATTTTTCTTT ..:.:.........::.....:.......:.x......:....:.x... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -28968695 -65261707 +3179 chr4 + 190214555 10930767 10930766 10930825 59 TCTTGGTTTTGAGTTCATATAGTAAGCATTACATATATATATATATACACACACACACA chr4 + 94230402 30834181 30834180 30834236 30834181 30834180 30834236 56 TCCTGGTCATGG---TATACAATATGTATTATATATATATATATACACACACACACACA ..:....:x..:---:...:.:..x.:....:.............:............. 12M3D44M 45/56 80.4% 56/94230402 0.0% 3/56 5.4% -19903414 -74326988 +3916 chr4 + 190214555 10930837 10930836 10930910 74 ATATATATGTGTATATATGTATATGTAATGCTTACTATATGAACATATGTATACATATATACATATATGTGTAT chr4 + 94230402 39937176 39937175 39937249 39937176 39937175 39937249 74 ATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ............:..::..x:.:....x..:..xx:...:x.x....:::...............x.....:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -29006339 -65224063 +3109 chr4 + 190214555 10931044 10931043 10931085 42 TGTATGTATGTATACATATATATGTGTGTGTATGTATATATG chr4 + 94230402 48958675 48958674 48958716 48958675 48958674 48958716 42 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATG ...:...x.....................:...:..x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -38027631 -56202771 +4144 chr4 + 190214555 10953115 10953114 10953247 133 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----------CTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTT----CTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTTCCT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .....x...:x..x:::.:.......:....----------:...x:x.:x........-......x.x.::x.:...x.:.............:----.::x...:..:x::...:.::....:.....::..::.:..:.x...:. 31M10I18M1I35M4I49M 89/133 66.9% 148/94230402 0.0% 15/133 11.3% -39223152 -55007250 +3307 chr4 + 190214555 10953118 10953117 10953239 122 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTT---TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:..---..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:..xxx:....x:..:..:x.xx:...:..::.:x.:::::........:....:. 16M3D103M 72/119 60.5% 119/94230402 0.0% 3/119 2.5% -52743999 -41486403 +3458 chr4 + 190214555 10953122 10953121 10953243 122 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x::..xxx:....x:..::.:x.xx:...:..x:.:..:::..........:...::. 13M3D106M 73/119 61.3% 119/94230402 0.0% 3/119 2.5% -52743995 -41486407 +3529 chr4 + 190214555 10953134 10953133 10953247 114 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTT-----CTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:..:::xx.x.:..:::..:...:::..x.....::x....xx.....x.:.-----....x...::.:x.xx:..x:...:.:.:.::..............::. 65M5I49M 71/114 62.3% 119/94230402 0.0% 5/114 4.4% -52743983 -41486419 +3118 chr4 + 190214555 10953161 10953160 10953244 84 TCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTT chr4 + 94230402 5308273 5308272 5308356 5308273 5308272 5308356 84 TTTTTCTTTCTGTGCTTTTTCCTTTTCTGCCTCTCTGCCCATCCAGGCTCGCTTCTTTCCACCCTCCTTCCACTTCTCTTTGTT .:.........x.x:..:..:.......x:..:...x:.:x...xxx..:x....:.x..x.....:...:x::.:....:x.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 5644888 NA +3124 chr4 + 190214555 10953272 10953271 10953343 72 TTCTTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ..::.......x..:.........:.:..:.::.:.:x:..::x..:...x.:x..::....x...x..... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -58210075 -36020327 +3248 chr4 + 190214555 10953274 10953273 10953347 74 CTTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 57372026 57372025 57372099 57372026 57372025 57372099 74 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ............:.x..::.x..::::.::.:..:..xx:.x..x.:.........:...::...x.....x.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -46418752 -47811650 +3186 chr4 + 190214555 10953275 10953274 10953356 82 TTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTT---------TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTT chr4 + 94230402 89201232 89201231 89201322 89201232 89201231 89201322 91 TTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTT ...............:....::.:xxx..x.x.:......---------...::....:...:..:x.x:.:...:...:.x::.:..... 40M9I42M 57/82 69.5% 91/94230402 0.0% 9/82 11.0% -78247957 -15982445 +3038 chr4 + 190214555 10953276 10953275 10953314 39 TTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTT chr4 + 94230402 37318513 37318512 37318551 37318513 37318512 37318551 39 TTTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTT .....::....:.......::.................. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -26365237 -67865165 +3279 chr4 + 190214555 10953281 10953280 10953365 85 TTTTCCTTTCTTTCTCTCTTTCTTTCCCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTTTCTTTCCTT chr4 + 94230402 76521918 76521917 76522002 76521918 76521917 76522002 85 TTGTCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTT-GTTCTGCTTATCACTCTCTCTGCTT ..x.............:.:.....x..:.-:.:x.....xx.:...:....:..x:....-x....x::.x.....:...:.x... 29M1I30M1D25M 61/84 72.6% 85/94230402 0.0% 2/84 2.4% -65568637 -28661765 +3374 chr4 + 190214555 10961558 10961557 10961659 102 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTCATGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCGGAGTTTGCAGTGAGCCAAGATCATGCCAA chr4 + 94230402 76033197 76033196 76033290 76033197 76033196 76033290 94 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ..::......--...x......:.........::x:........x.xx.x...x::......:....:..x:xx:.x:..:..------..x..x....... 10M2D71M6D13M 67/94 71.3% 94/94230402 0.0% 8/94 8.5% -65071639 -29158763 +3692 chr4 + 190214555 11013388 11013387 11013533 146 TGTGTGTGTGTGCATGTGTGTGAGTGTGCATGTATATGCATGTGTGAGTGCGTGTGTATGCATGTG-------------TATGTGCATGCATGTGTATGCATGTGTGAGTG----AGTGTATGTGTGTATGTGTGCATTGTGTGTGTGCACGTGTGTGTGAGT chr4 + 94230402 79265520 79265519 79265677 79265520 79265519 79265677 158 TGTGTGTGTGTGCATGTGTGTGGCTGT--ATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTT---TGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGT ......................:x...--..:..:..:..:.....x:::..::x::..::x....-------------...:.:x.....:x.---...x.x.x......----.:..:..x.x....x...:x..x:::x...:.x:.::::.x.:..... 27M2D37M13I15M3D14M4I48M 94/141 66.7% 158/94230402 0.0% 22/141 15.6% -68252132 -25978270 +3164 chr4 + 190214555 11030963 11030962 11031010 48 GTGTGTGTGTGTGTGTATATTATATATATATGTGTGTGTATATATATA chr4 + 94230402 51658583 51658582 51658630 51658583 51658582 51658630 48 GTGTGTGTGTGTGTGTATACCATGTATACATGTGTGTATGTCTGCACA ...................::..:....:........:.:.x.::.:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -40627620 -53602782 +3339 chr4 + 190214555 11030980 11030979 11031086 107 TATTATATATATATGTGTGTGTATATATATATGTGTGCATATATATATACACATATATATATACACACACACAATGGAGTACTATTCAGCCTTAAACAACAAGGAAA chr4 + 94230402 46063295 46063294 46063401 46063295 46063294 46063401 107 TACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCTCAACAGAACTAGCAAA ..::...:..:.:.:::.......:x::.:....x::::...:.x....:........:xxx.:.:.:...x::..x.:......::x..::x.x.x...x..x... 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% -35032315 -59198087 +3526 chr4 + 190214555 11056149 11056148 11056221 73 TCTGTCTCTGTCTCTCTGTCTCTCTCTATATGTATATGTATACACATACATATATATATATATCTGTGTATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTC--TCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...:............--.......x.:...:...:..........:..::.:.:x.x..x..x::.x..... 16M2D55M 54/71 76.1% 71/94230402 0.0% 2/71 2.8% -49775381 -44455021 +4021 chr4 + 190214555 11068100 11068099 11068278 179 GAAGGAAAGAAAAAGGAAGGGAAAGAA--GGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAA chr4 + 94230402 59372565 59372564 59372736 59372565 59372564 59372736 172 GAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAAT--AATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAG-------GGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAA ..:..:...x..x.......:...:x.--.:...x..x...x:.x::..:....:.x.:x..x..x--..x:.:.:::.x:..:::.:......:...x...:....-------....::x..x..x.:..:.:x.:::.:x.:..:....:x..x.:x.:.......x..x:..:.:x.. 27M2I37M2D39M7D67M 105/170 61.8% 172/94230402 0.0% 11/170 6.5% -48304465 -45925937 +3545 chr4 + 190214555 11068102 11068101 11068209 108 AGGAAAGAAAAAGGAAGGGAAAGAAGGAAGGAAGGAAGG--AAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGA chr4 + 94230402 89498607 89498606 89498714 89498607 89498606 89498714 108 AGGAAAAGAAATGGAAGGGAATAAA--AATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGA ......::...x.........x:..--..x.x....:.:--...:.:..x..:..:x...x.::..::..:x::.x...x........:.:.::.x.::.::.:...... 25M2D12M2I69M 70/106 66.0% 108/94230402 0.0% 4/106 3.8% -78430505 -15799897 +3090 chr4 + 190214555 11068115 11068114 11068202 88 GAAGGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAA chr4 + 94230402 11181416 11181415 11181503 11181416 11181415 11181503 88 GAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAA ....x.xx::.:..:.x.:..::...:.x.x.x.:.x::.:.x::....x:x.....:.:.:..::.....x.............:.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% -113301 -94117101 +3554 chr4 + 190214555 11068141 11068140 11068257 117 AAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAAGAA chr4 + 94230402 65363837 65363836 65363953 65363837 65363836 65363953 117 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAGCCAACAGAA ...:..x....:.x.xx...:x::..:::...:.x:xx.:.:.:...x..:.....:.x....x.x.........xx:.....:...x::...:.:::x..:...x.:xx..x.... 117M 72/117 61.5% 117/94230402 0.0% 0/117 0.0% -54295696 -39934706 +3613 chr4 + 190214555 11068149 11068148 11068286 138 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAG---------AAAGAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAA--CTAGTTCC chr4 + 94230402 54011593 54011592 54011732 54011593 54011592 54011732 140 AGAAAAAAAAACAAAGAAAGCAAGAAA---------AAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAACTTAATTCC .:.:...:...x........x......---------....:..:.x.xxx.....x.x.:x..:.....:x.:...x.---------...:...xx..x.:x.x:..:.:...:x:.:...x...:....:...:....--:..:.... 27M9D42M9I52M2I8M 89/129 69.0% 140/94230402 0.0% 20/129 15.5% -42943444 -51286958 +3280 chr4 + 190214555 11068170 11068169 11068239 70 AAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGA chr4 + 94230402 48632621 48632620 48632690 48632621 48632620 48632690 70 AATACAGAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA ..x.x......x.::..:......x..::x:.....::...x.........x::.....x....:.x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -37564451 -56665951 +3117 chr4 + 190214555 11068172 11068171 11068250 79 GAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGA chr4 + 94230402 65426282 65426281 65426360 65426282 65426281 65426360 79 GAGAGAAAAAGAGCGAAAAGAGAAAACTGACAAAAACAGAGAAAGAATAATTCAGAAAAATAGATAGGAGAAAGAATGA ..:.....:.:..x:.:..:::....x...x.:...x.:..:...:.x::xxx.....:.x...:..:........x.. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% -54358110 -39872292 +3172 chr4 + 190214555 11084016 11084015 11084065 50 AACCTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCACTTTTTTGCCC chr4 + 94230402 64964473 64964472 64964522 64964473 64964472 64964522 50 AATCTTTTTTTTTTTTTTTCCTATTGAGACAGAAATTCCTTTTTTTCCCC ..:................::.x..........:x...x:......x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -53880457 -40349945 +3486 chr4 + 190214555 11101304 11101303 11101382 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.xx..x.:.........:.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -64931897 -29298505 +3362 chr4 + 190214555 11122465 11122464 11122547 83 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTCCGAATAATCATTTGAACCCGGGAGGCGGTGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--....:.:...........::........:..x:xx..x..:........:.:..x:xxx..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -64910732 -29319670 +3596 chr4 + 190214555 11127054 11127053 11127155 102 ATAAAAAAATTAGCTGTGCATGGTAGCCCATGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCATGATAACCACTTGAACCCGGGAGGCAGAGGTTATAGA chr4 + 94230402 76033183 76033182 76033278 76033183 76033182 76033278 96 ATGAAAGGATGA----TACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..:...::..x.----.:..::..:.:x..:.--......:...........::.:......x.x..xx..x...........:.:..x:xx:..:.:.... 12M4D16M2D68M 67/96 69.8% 96/94230402 0.0% 6/96 6.2% -64906129 -29324273 +3511 chr4 + 190214555 11135300 11135299 11135407 108 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:.....x.x....x.:..:.x.:.:...::x::::.:.::x:....::x.:.::....:..:x::..:x.x.:.....:.......:x.....::.::.:. 108M 63/108 58.3% 108/94230402 0.0% 0/108 0.0% -9973894 -84256508 +3355 chr4 + 190214555 11135302 11135301 11135413 112 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATATACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTA----CCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:........x.x....x.:..:.x.:.:...::x::::.:.::x:.....----:x....::.....::x:..::x.x.....:...:.:....x:...::..:..:. 54M4D54M 66/108 61.1% 108/94230402 0.0% 4/108 3.7% -9973892 -84256510 +3448 chr4 + 190214555 11135305 11135304 11135408 104 ATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATAT chr4 + 94230402 5214218 5214217 5214321 5214218 5214217 5214321 104 ATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:x.:::.::.x:.......:.::x....x..::::::::.x.::.......::.x.::..:.:....:::.x.:..:......:..::.x......::.:.. 104M 59/104 56.7% 104/94230402 0.0% 0/104 0.0% 5921087 NA +3173 chr4 + 190214555 11135306 11135305 11135389 84 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x::.x.....x.................:.xx:...:x.::.:::.....:x:..:..:.x.:..:.:.:..::.::::.. 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% -74699227 -19531175 +3250 chr4 + 190214555 11135309 11135308 11135428 120 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTG-----------TATATATGTATG---TGTGTATATATATGTGTATATATACATATATATATATTTTTAG chr4 + 94230402 79265519 79265518 79265652 79265519 79265518 79265652 134 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAG .............::........xx...:.:.:::.::::.....:.:::.::x.:....x....-----------.x.....:x...---.x..:x.x.x.:x.....:.x..:...x.x.:..x:.x:.:.. 65M11I12M3I43M 77/120 64.2% 134/94230402 0.0% 14/120 11.7% -68130210 -26100192 +3275 chr4 + 190214555 11135311 11135310 11135420 110 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTAT--ATATGTATGTGTGTATATATATGTGTATATATACATATATATAT chr4 + 94230402 5214204 5214203 5214315 5214204 5214203 5214315 112 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGT ...::x.....:x::..x.:::.::.x:.......:.::x....x..:::::.:..x..:......--..x..:........::::.x.:....:.:.::.:::.x..:.:. 66M2I44M 64/110 58.2% 112/94230402 0.0% 2/110 1.8% 5921107 NA +3051 chr4 + 190214555 11135313 11135312 11135383 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTA chr4 + 94230402 39131745 39131744 39131815 39131745 39131744 39131815 71 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATA .:..x...::.::x......x...x.x.......:x.....:......x..x..::..x.:.x:....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -27996432 -66233970 +3256 chr4 + 190214555 11135318 11135317 11135384 67 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x.................:.xx:...:x.::..::.:....x...:....x...::.:::.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -74699223 -19531179 +3081 chr4 + 190214555 11135324 11135323 11135399 76 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.................:.xx:....x.::.::....:..x:.::..:.x.:.:::::::..:.:.:... 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% -74699217 -19531185 +3212 chr4 + 190214555 11135326 11135325 11135401 76 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.................:.xx:.:.:x.::..:....:.:x:..:..:.x....:::::...:.:.::.. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% -74699215 -19531187 +3773 chr4 + 190214555 11135328 11135327 11135397 70 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .....x.................:.xx....:x.:...:......:x...:....x.:..:::.:...:. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -74699213 -19531189 +3356 chr4 + 190214555 11135330 11135329 11135404 75 TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.................:.xx:...:x::...:..:....x...::.:.x.:..:.:.:...:::::.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -74699211 -19531191 +3391 chr4 + 190214555 11135331 11135330 11135450 120 GTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATATACATATATATATATTTTTAGTTAAATGTAGTTTA---TTCTGAGT chr4 + 94230402 79265519 79265518 79265624 79265519 79265518 79265624 106 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCA------AACATATTTGTGTCCACA-----------ACACCTCTATATAAATGCACTTTGCCTTTTTGAGT .............::........xx...:.:..:...:.:....::.:.:.:.------x.:....x.....x:.:.-----------.:.::.:..xx......:.x...:---..:..... 53M6D18M11D24M3I8M 73/103 70.9% 106/94230402 0.0% 20/103 19.4% -68130188 -26100214 +3356 chr4 + 190214555 11135332 11135331 11135406 75 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...................xx:....x::...::.:.:..x..::....x.:.::.:.:..::::.:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -74699209 -19531193 +3508 chr4 + 190214555 11135340 11135339 11135420 81 TGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATATACATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACA------TATGTAAATACATGTTTATGCACACATACACACAT .....x.........:.........xx..:.:x.:...:.------.:....x...:....x...::.:.....:.:.:.. 40M6D35M 56/75 74.7% 75/94230402 0.0% 6/75 8.0% -74699201 -19531201 +3026 chr4 + 190214555 11140437 11140436 11140494 58 TCCTTCTCCTTCTCCTTCTTCTCCTTCTCCTTCCCCTTCTCCTTCTCCTTCCCCTTCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCT---TCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC .....:.::..:.....:....---..:...:.......:.:x....:..:..:.... 22M3D33M 42/55 76.4% 55/94230402 0.0% 3/55 5.5% -63290244 -30940158 +3074 chr4 + 190214555 11140639 11140638 11140714 76 TTTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTT chr4 + 94230402 12044421 12044420 12044496 12044421 12044420 12044496 76 TTTTCTTATTCTTCTATTCTTATTATCTCTTATGTTCTTACTCTTTCTTATATTCTTATTCTTCAATTTATTCCTT .......x.......x.....x..x.:::.:x.x.....x:....::.:x.x.....x......xx:..x...:.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -903782 -93326620 +4181 chr4 + 190214555 11191564 11191563 11191811 248 TAGTATCGCTCATTATAGTTACTATGCTATACATTAGCTCTCCGGAACATATTCAGCTTGCATAACTGAAGGTTTGTACCTGTTGAGCAACATCTCCCCATTTCCCCATCTTA---GCCCCCGTAACCACCATTCTGCTTCTGTAAGTTCC-----------------ATTTTCTTTTCTTCTTTCTTTCTTTCTGTCTGTCTTTCTTTCTTTCTTTTCTTCCTTTCCTTCCCTTTATCTTTCTTTTTCT-TTCTTTCTTTCTTTGTTT chr4 + 94230402 33237514 33237513 33237764 33237514 33237513 33237764 251 TAGTATCAACCATTAAAGTAACTGT----TAAATTAATGTCTACTAAAAAGTGCTGCTTCCATTAGTGAGGGTTT-TATCCGT----------CTCTCC-TTTCCCCACCCTGCCTGTCTCAGTTTCTA--ATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTTGGTCT .......:x:.....x...x...:.----..x....::x:::xxx..x.x:.x.x....x...x.x...:.....-..:.:..----------...:..-........:.:.:---.:.:.x..xx.:.--..:...::...x.x.x:..:-----------------:......::.:.x::..:xx...x.::x....:...x:..:...:x:...:.:x...:..........x::x.....x....-:.:.x...:....x..:. 25M4D46M1D7M10D6M1D13M3I13M2D20M17I82M1I18M 149/230 64.8% 251/94230402 0.0% 39/230 17.0% -22045950 -72184452 +3362 chr4 + 190214555 11191712 11191711 11191859 148 ATTTTCTTTTCTTCTTTCTTTCTTTCTGTCTGTCTTTCTTTCTTTCTTTTCTTCCTTTCCTTCCCTTTATCTTTCTTTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTG chr4 + 94230402 69568144 69568143 69568274 69568144 69568143 69568274 131 ATTTTGTTTGCCTCTTATCATCCTAATGTCTGT----------TCCGTTACTACAGTACTTTCC-------TTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTG .....x...x.:....x::x..:.xx.......----------.:.x..x..x.xx.x.:....-------..x..x:.:xx..x....:.:......:...::::.x::.::....:.:x:...xx........:...:...:.... 33M10D21M7D77M 85/131 64.9% 131/94230402 0.0% 17/131 13.0% -58376432 -35853970 +3779 chr4 + 190214555 11191789 11191788 11191937 149 TTTCTTTCTTTCTTTC---TTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCT------------------CTCTCTTTCTTTCTTT-CTTCCTTTCTTTCTTTCTTCTTT chr4 + 94230402 72471342 72471341 72471512 72471342 72471341 72471512 171 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTCCCTTTCTGACTCCTTT ..x:...:.:....x.---...x:....xxx......x:..x::...:.:....:.:........:...::...x:.x:x.....:.x..x..::x.x...:.x.x:..x.:.------------------::.:..:....:.:..-..:...::......xx..:.... 16M3I94M18I16M1I23M 97/149 65.1% 171/94230402 0.0% 22/149 14.8% -61279553 -32950849 +3488 chr4 + 190214555 11191812 11191811 11191936 125 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT--TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..--.:.xx.x...::.:...:....:.:x..:x.:.x....xx.....x.:.xxxx.:..:x:.:....x.xx...:.:...::.:.::..:.......:....:.x:.. 16M2D107M 76/123 61.8% 123/94230402 0.0% 2/123 1.6% -52505305 -41725097 +4215 chr4 + 190214555 11191816 11191815 11191940 125 CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT--TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..--.:.xx.x....:.....:....:.::..::.:.x....xx.......:.:xxx.:..:x:.:.:..x.xx.:.:.:...::.:..:..........:...:..x:.. 16M2D107M 79/123 64.2% 123/94230402 0.0% 2/123 1.6% -52505301 -41725101 +3230 chr4 + 190214555 11191828 11191827 11191947 120 CTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTTTCTTTTCTTTC chr4 + 94230402 63697117 63697116 63697230 63697117 63697116 63697230 114 CTTTATTCCTCTCCTTTCCGGTGTTTTCT------CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCC ....x..:..:..:...::xx.x:.....------....:....:.:x..:x.:.x....xx.....x...:xxx.:..:x:.:....x:xx.:.:.:...::.:.....::......:. 29M6D85M 71/114 62.3% 114/94230402 0.0% 6/114 5.3% -52505289 -41725113 +3172 chr4 + 190214555 11191841 11191840 11191947 107 TTTTTTCTTTCTTTCTTTGT-TTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTTTCTTTTCTTTC chr4 + 94230402 63697119 63697118 63697226 63697119 63697118 63697226 108 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTC ..x..:..:..:..:::x..-..:.:.....:....:.::..::.:.x....xx...:.x...:xxx.:..:x:.:..:.x:xx.:.:.:...:.::........... 20M1I87M 65/107 60.7% 108/94230402 0.0% 1/107 0.9% -52505278 -41725124 +3259 chr4 + 190214555 11191846 11191845 11191924 79 TCTTTCTTTCTTTGTTTCT---TTCTTTCTTTCTTTG-TTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::....::..---:..:....::.....-:.x..x.:..............:...x.....x..xx::x..... 19M3I15M1I45M 58/79 73.4% 83/94230402 0.0% 4/79 5.1% -46180181 -48050221 +5970 chr4 + 190214555 11192869 11192868 11193001 133 AGCATGAAAATGGAAAGAAGGAAAGAGAGAAGGAAGGAAGGAAGGAAAGAAGGAAGG--------------------------AAGGAAGGAAGGGGAAATGGGAGGGGAGGAG--AGGGGAATGAAAGGAAGAAAAGGGAGGAAAGAAGGAAGAAAGGGA chr4 + 94230402 71501746 71501745 71501906 71501746 71501745 71501906 161 agtagggagaaggaaagaagaaaggagtgagggagggagagaaggaagagaggaaagcagagagaggatgaagggaaagcaaagagggagaaaggagaaaaaggaagaaagaaagAACAGGAAAAACAGGAAGAAAAGGGAGGGAAGAAGGGAGAAAGAGA ..:.x.:.:.x.........:..:...x..:...:...::.......:::.....:.--------------------------:...:..:....:....x:...:.::..:.:--.x:....x:.x................:.......:......:.. 57M26I31M2I45M 98/133 73.7% 161/94230402 0.0% 28/133 21.1% -60308877 -33921525 +3796 chr4 + 190214555 11199972 11199971 11200050 79 GTGGTGCGCGCCTGTAGTCCCAGCTACATGGAAGGCTGAGGCAGGAGAATCGCTTGACCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:..--......:........x..:.........x.xx.x...x.:.....x.....:..x.xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -64833229 -29397173 +3344 chr4 + 190214555 11230702 11230701 11230777 76 GAGTCTGACTTCAAAATATATAT--ATATATAAAAATATGTGTATGTATATGTATATATACATATACACACAGAGTTT chr4 + 94230402 63972314 63972313 63972391 63972314 63972313 63972391 78 GAGTCTAACTACATTTTATATATGGATGTATGAAAATGTGTGCATGTTTACTTATATTTATCTATACAAGCAAATTTT ......:...x..xxx.......--..:...:.....:....:....x..:x.....x..:x......x:..:.x... 23M2I53M 57/76 75.0% 78/94230402 0.0% 2/76 2.6% -52741612 -41488790 +3025 chr4 + 190214555 11230704 11230703 11230764 61 GTCTGACTTCAAAATATATATATATATAAAAATATGTGTATGTATATGTATATATACATAT chr4 + 94230402 43288472 43288471 43288532 43288472 43288471 43288532 61 GTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGAT ..x..xx.............:..:......x::..:.:.:...x.:..:.......x.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -32057768 -62172634 +3144 chr4 + 190214555 11249973 11249972 11250035 63 GCACTCCAGCCTGGCAACAGAGTGAGACTGTCTCAGAAAAAAAAAAAAAAAAAAAAAGTAAAA chr4 + 94230402 33327133 33327132 33327195 33327133 33327132 33327195 63 GCACTCCTGATCTTCAACAGACTAAAACTGTGCTGGAAAAAAAAAAAAAAAAAAAGGCTGAAA .......x.x::xx.......x.:.:.....x:::....................::x.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -22077160 -72153242 +3110 chr4 + 190214555 11296353 11296352 11296468 116 TGTCTCTCTCTCTTTCCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCTTCCTTCCTTTTCCTTCCTTCCTTCTTTTCTTCCT chr4 + 94230402 63697120 63697119 63697235 63697120 63697119 63697235 116 TATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .:.::.....::..:.xx.x.:..::x...:....:.:x..::.:.x....xx.....x....xxx::::.x.:..:::x.xx:...:..:.:..:..:..:...::..:...::. 116M 65/116 56.0% 116/94230402 0.0% 0/116 0.0% -52400767 -41829635 +3274 chr4 + 190214555 11296353 11296352 11296423 71 TGTCTCTCTCTCTTTCCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCT chr4 + 94230402 6626814 6626813 6626884 6626814 6626813 6626884 71 TGTTTCTTCATCTTTCCCTGTCTTTCATACCTCTCTTTCTTTCCTCTGCCTCTTTTTTTCCCATATCCCCT ...:...::x.........x........x:..:..........:.::x::::..:....:.:x.x.::... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 4669539 NA +3072 chr4 + 190214555 11296468 11296467 11296549 82 TTCCTTCCTTCTTTCCTTTCTTCCTCCCTCCTTTCCTTTTTCTTTTTCTTTCTTTCTTTCTTCCTTTTTCTCGCTCTCCTTC chr4 + 94230402 57372029 57372028 57372110 57372029 57372028 57372110 82 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..:...:::.:x.:...x..:....:.::.....xx:.x:.x...........:...::...x....:x:.x...x.:::.. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% -46075561 -48154841 +3117 chr4 + 190214555 11308540 11308539 11308611 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.x........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -64724666 -29505736 +3141 chr4 + 190214555 11334346 11334345 11334425 80 TATTATCACCCATATTATAAATGGGGAACCTCGGGCACCTAGCAGTCAAGTAACTTATTTAAAGTCACACAGCCAGTGGG chr4 + 94230402 82283118 82283117 82283196 82283118 82283117 82283196 79 TATTATAATC-ATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG ......x.:.-..x.:...x........x..x..:...xx:xx::.:....:...x.::...:.........::....:. 10M1D69M 55/79 69.6% 79/94230402 0.0% 1/79 1.3% -70948772 -23281630 +3130 chr4 + 190214555 11337059 11337058 11337129 71 GAAGGGGTGGGAGCAAGAACTAGACTAGAGCAAGCAAAGAGTGATGATGAAGTG-AAGAAGTCGAATAGCAA chr4 + 94230402 30791937 30791936 30792008 30791937 30791936 30792008 72 GAGGAGGTGATGGTAAGATACAGATTAAAGCAAACAAGAAGTGATGATGAACTGAAAGTGGTTCAATAGGAA ..:.:....:x:.:....xx:...:..:.....:...::............x..-...x:..:x.....x.. 54M1I17M 51/71 71.8% 72/94230402 0.0% 1/71 1.4% -19454878 -74775524 +3334 chr4 + 190214555 11354987 11354986 11355037 51 TTTTTTTTGTTGTTTTTTTTGTTTTGTTTTTTTGTTTTTTTTTTTGAGACA chr4 + 94230402 90203142 90203141 90203192 90203142 90203141 90203192 51 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATTAAGACA ..............x..x......x........x......x.x..:..... 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% -78848155 -15382247 +3181 chr4 + 190214555 11354988 11354987 11355031 44 TTTTTTTGTTGTTTTTTTTGTTTTGTTTTTTTGTTTTTTTTTTT chr4 + 94230402 8555676 8555675 8555719 8555676 8555675 8555719 44 TTTTTTTGTTGTTTTGTTCGTTTTGTTTGTTTGTTTTTACTTTT ...............x..:.........x.........x:.... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 2799312 NA +3216 chr4 + 190214555 11361159 11361158 11361222 64 GATGAGGAAGAAGATGGAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAA chr4 + 94230402 39912592 39912591 39912655 39912592 39912591 39912655 64 GAAAAGTATGATGAATGAAAAGAATATAGGGCAAAAACAAACAAACAACAACAACAACAAAAAA ..x:..x.x..x..xx.....:..:.x.:x:x.x.............................. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -28551433 -65678969 +3340 chr4 + 190214555 11361176 11361175 11361283 108 AAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAAACA-----------GTGCCAGAAA-ACAAATTGACATTAGATAATCTGGAAGAAGAGTTTTGGT-TATTCAAGA chr4 + 94230402 45240833 45240832 45240953 45240833 45240832 45240953 121 AAAAGACCAGGAAAAACAAACAAACAAACAACAACAACAACCAGAAACCCTAAAAGATTTTATGTCAGAACTGCAAATTTCTGTCACCTAACCTGCAATGGGAATACTGCTGTATTAGAGA ....:.x..::.x............................x.:...x.x-----------:..:.....x-:......xx::.:.xx...:...x..x::..:.x:..x.-....x:... 50M11I10M1I39M1I9M 77/108 71.3% 121/94230402 0.0% 13/108 12.0% -33879657 -60350745 +3000 chr4 + 190214555 11361189 11361188 11361243 55 AAACAAACAAACAAACAACAACAACAACAAAAAAACAGTGCCAGAAAACAAATTG chr4 + 94230402 83102724 83102723 83102778 83102724 83102723 83102778 55 AGAGAAAAAAACAAACAACAACAACAACAAAAAACCTGCACACAGAAGCAAACTG .:.x...x..........................x.x.::.xx::..:....:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -71741535 -22488867 +3075 chr4 + 190214555 11361189 11361188 11361221 33 AAACAAACAAACAAACAACAACAACAACAAAAA chr4 + 94230402 89758364 89758363 89758396 89758364 89758363 89758396 33 AAACAAACAAACAAACAACAACAACAACAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -78397175 -15833227 +3266 chr4 + 190214555 11361193 11361192 11361227 35 AAACAAACAAACAACAACAACAACAAAAAAACAGT chr4 + 94230402 22215901 22215900 22215935 22215901 22215900 22215935 35 AAACAAACAAACAACAACAACAACAAAAAAACAGT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% -10854708 -83375694 +3070 chr4 + 190214555 11368093 11368092 11368160 68 ACTCCATTTCCATCGAACTGTGTGTCCTTGAGGAAGTTGTTTAATGTCTCTGATTTTCACTTTCCACA chr4 + 94230402 79037095 79037094 79037162 79037095 79037094 79037162 68 ATTTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCA .:.::.....::x.:.:....:..x....::.......:...x..x.x.....x.....x..:.:x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -67669002 -26561400 +3012 chr4 + 190214555 11442147 11442146 11442192 46 AGAAAGAGGAAGACAACGACAATAACAACAACAACAAAGCAAAGTA chr4 + 94230402 61993795 61993794 61993840 61993795 61993794 61993840 46 AGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAGCA .......::..:.x:.......:...............:x....:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -50551648 -43678754 +4491 chr4 + 190214555 11454915 11454914 11455098 184 GGAGGAGAAGGA--GAAAGAAGGAGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA----AGAAGAAGAAGAAGGGAAGAAGAAGAAGAAGAAGGAGAAGAAGAGGAAGAAGAAGAAGAAGAGAAGAAGAAGAAAAGGAGGAGGACACTTTATTGCA chr4 + 94230402 34805282 34805281 34805471 34805282 34805281 34805471 190 GAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAACAGTTTGTTGCA .:.........:--.::..x:..::....x.::.....::..:..:..x:x...:..x::.:x:x::.x..x:...x.x:.:.....:.----..:::x..:.x..:...:....x.:..x.x.::.:.:xx....x.xx.:.::..::....:.x:..:::.::.::x:.....::...x...:..... 12M2I75M4I97M 106/184 57.6% 190/94230402 0.0% 6/184 3.3% -23350367 -70880035 +3081 chr4 + 190214555 11455005 11455004 11455062 58 AGAAGAAGAAGGGAAGAAGAAGAAGAAGAAGGAGAAGAAGAGGAAGAAGAAGAAGAAG chr4 + 94230402 46695009 46695008 46695066 46695009 46695008 46695066 58 AAAAGAAGGGGGGTGGGAGTGGAATAGAAGGGAAAAAAAGAGAAAGAAGAAAAAGGAG .:......::...x:.:..x:...x.::.:...:..:.....:........:...:.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -35240004 -58990398 +3050 chr4 + 190214555 11467161 11467160 11467231 71 ACATATATATGCATATATACACACATATATACACATATATACACATATATACATATATATACACACACACA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...:.:....x..:..::.x......::.....x.x....::.:..x.:.:::.:.....:..::...::. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -11133037 -83097365 +3009 chr4 + 190214555 11468413 11468412 11468471 59 AGAACAATGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATAT chr4 + 94230402 47271086 47271085 47271144 47271086 47271085 47271144 59 AGAACAATATTTTCTCCTTCTCTCTCTCTCTCTCTTGTTTTTTTAATATATTTGTAGAT ........::......::.................:x:.:.:.:xx.x...x.:..x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -35802673 -58427729 +4144 chr4 + 190214555 11468417 11468416 11468525 109 CAATGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATATATA---TATACGTATATATATATAT chr4 + 94230402 60831512 60831511 60831623 60831512 60831511 60831623 112 caacagttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...::x..:.:x.x:x.x...x.....x.............x.x.......:.:....:.:.:...:.:.:x.x..x..::..x.....:---.:.:..:..:.:.:..... 90M3I19M 74/109 67.9% 112/94230402 0.0% 3/109 2.8% -49363095 -44867307 +6769 chr4 + 190214555 11468423 11468422 11468630 208 TTTCTCTCTCTC--------TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATA-TATGTATATATATAT----------ATACGTATATATATATATATATATATATA---CGTA------TATATATATGTATATATATATATATACGTATATATATATATATGTATATATGTATATATATCTTTATATAGAGAGAGGTAGATACTTATT chr4 + 94230402 4618342 4618341 4618573 4618342 4618341 4618573 232 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATATTATATAT-TATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatataca-atacatatatacatatatatatatgtatgtatataAAAGAATGTA-ATATTTGCT ...:...:...:--------.......::..............x:....::......x.x......-.....x.....-...:...-.....:.----------.....x.x...x...x:x..x...x...:---....------.........:.....:.:.xx:xx...:....:.-...:....:..:....:.......:.x.x......:.:::.x...-...:..::. 12M8I46M1D11M1I7M1D7M10I29M3I4M6I34M1D45M1D9M 156/204 76.5% 232/94230402 0.0% 32/204 15.7% 6850081 NA +3349 chr4 + 190214555 11468431 11468430 11468521 91 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATA---TATATATACGTATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.x.x.x...:.:....:.:.:.:::..::x.x..x...:..x.....:---.:.::::.:..:.:..... 72M3I19M 61/91 67.0% 94/94230402 0.0% 3/91 3.3% -49363099 -44867303 +3423 chr4 + 190214555 11468433 11468432 11468523 91 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATATA---TATATACGTATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.x.x.....:.:....:.:.:.::.::.:x.x..x...::.x.....:---.:.:::.:.:.:.:..... 72M3I19M 61/91 67.0% 94/94230402 0.0% 3/91 3.3% -49363097 -44867305 +3759 chr4 + 190214555 11468437 11468436 11468529 93 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATATATAT-ATACGTATATATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.:.......:.:....:.:..::::.:.:x.x..x:..:..x.....-:.x:..::::..:.:.:..... 71M1I22M 63/93 67.7% 94/94230402 0.0% 1/93 1.1% -49363093 -44867309 +3944 chr4 + 190214555 11468439 11468438 11468533 95 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATATATATATACGTATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-GTCTGTGCGCATGTGTGTATAT ...x.....x.............:.:.......:.:....:..::.:::.:.:x.x.:x...:..x.....:-..x.:.::::..:.:.:..... 72M1D22M 64/94 68.1% 94/94230402 0.0% 1/94 1.1% -49363091 -44867311 +3505 chr4 + 190214555 11468441 11468440 11468535 95 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACGTATATATATATATGTATATATATATATACGTATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT-GGTCTGTGCGCATGTGTGTATAT ...x.....x...........x.:.:.......:.:.....::.:.:::.:.:x.x..x...:..x....:-x:.x.:.::::..:.:.:..... 71M1D23M 62/94 66.0% 94/94230402 0.0% 1/94 1.1% -49363089 -44867313 +3074 chr4 + 190214555 11468531 11468530 11468601 71 TATATACGTATATATATATGTATATATATATATATACGTATATATATATATATGTATATATGTATATATAT chr4 + 94230402 41749096 41749095 41749166 41749096 41749095 41749166 71 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGT ......x::.:.:.....x..x.....xx:...:.:.....:....:...:.....:::x.:...x:..:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -30280565 -63949837 +3071 chr4 + 190214555 11468543 11468542 11468603 61 TATATATGTATATATATATATATACGTATATATATATATATGTATATATGTATATATATCT chr4 + 94230402 76709592 76709591 76709652 76709592 76709591 76709652 61 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCT .......:.::..:.:.x....:.x.:..x:.:..:...:.....x.:...x......... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -65241049 -28989353 +3130 chr4 + 190214555 11471500 11471499 11471570 71 CACCTATAGTCCCAGCTATGTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGAAGGTGGAAGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:....:.......:x..::........x.xx.x...x::......:.......x.xx::.:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -64561707 -29668695 +3056 chr4 + 190214555 11493213 11493212 11493279 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -64539998 -29690404 +3532 chr4 + 190214555 11504210 11504209 11504292 83 CATGGTGGTGCCCACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGTGGAGGTTGGAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x......:...........::........x.xx:x...x::........::.:..x.xx:..:..x.. 11M2D70M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -64528987 -29701415 +3084 chr4 + 190214555 11532486 11532485 11532531 46 TTTATATATATATATATATTTTGTTGTTGTTGTTGTTGTTGTTGTT chr4 + 94230402 77305224 77305223 77305269 77305224 77305223 77305269 46 TTTTGATATATATATATATTTTTTTGTTGTTGTTGTTGTTAGGGTT ...xx.................x.................:xx... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -65772738 -28457664 +3586 chr4 + 190214555 11540801 11540800 11540860 60 GCATTCAAAGCTGTACTGGGCTGCATGCAGCCTGTGGGCTGCAGGTTGGACAAGCTTGAT chr4 + 94230402 83270674 83270673 83270733 83270674 83270673 83270733 60 GCACTGTGAGCTGTGCCAGGTTGCATGCAGCCTGTGGACTGTGAGTTAGACATGCTTGGT ...:.xx:......:.::..:................:...:::...:....x.....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -71729873 -22500529 +3739 chr4 + 190214555 11565749 11565748 11565838 90 ATATATATAGTATATATATAGTATATACTATATATAGTATATATAGTATATATACTATATATATACTA-TATAT-----ATACTATATATATACTA chr4 + 94230402 26320249 26320248 26320344 26320249 26320248 26320344 96 ATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..x...x.x::..:......x..:...:........x......:.:.....x..:...:...x..x..-.....-----:..:.:.....:..x.. 68M1I5M5I17M 68/90 75.6% 96/94230402 0.0% 6/90 6.7% -14754500 -79475902 +3304 chr4 + 190214555 11599769 11599768 11599855 87 ACACCATATGTCTGTGTATGTGTGTGTATATATATATACATATATATATACACACGTATATATATATGTATATA-------TATATATATACAC chr4 + 94230402 79265516 79265515 79265609 79265516 79265515 79265609 94 ACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC ...x::.:...x....:.........xx.:......:.:.:.::.:.::....:.:x.:....x.:...x:.:.-------......x..:... 74M7I13M 59/87 67.8% 94/94230402 0.0% 7/87 8.0% -67665747 -26564655 +3595 chr4 + 190214555 11599775 11599774 11599868 94 TATGTCTGTGTATGTGTGTGTATATATATATACATATATATATACACACGTATATATATATGTATATATATATATATACACACACACACACACG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTA------------------GGCATACATATGTAAATACATGTTTATGCACACATACACACATG .:.........:.........:...xx..:..------------------x::...:.......x...:..:.x...:......:.......:. 32M18D44M 59/76 77.6% 76/94230402 0.0% 18/76 23.7% -74234766 -19995636 +3410 chr4 + 190214555 11599809 11599808 11599867 59 TATATATATACACACGTATATATATATGTATATATATATATATACACACACACACACAC chr4 + 94230402 47135181 47135180 47135239 47135181 47135180 47135239 59 TATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC .....::.......:.x..xx:.x......:..:...:.:.:...........:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -35535372 -58695030 +3228 chr4 + 190214555 11599819 11599818 11599875 57 CACACGTATATATATA-------TGTATATATATATATATACACACACACACACACGAGAGAGT chr4 + 94230402 74671053 74671052 74671116 74671053 74671052 74671116 64 cacaAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAAT ....x.x.....:.x.-------................................x:.:.:.:. 16M7I41M 48/57 84.2% 64/94230402 0.0% 7/57 12.3% -63071234 -31159168 +3328 chr4 + 190214555 11599828 11599827 11599889 62 ATATATATGTATATATATATATATACACACACACACACACGAGAGAGTGTGTGTGTGTTTCC chr4 + 94230402 30834199 30834198 30834259 30834199 30834198 30834259 61 ATATGTAT-TATATATATATATATACACACACACACACAGGAGGTAATGCAGTTCTGTCTTC ....:...-..............................x...:x.:..::xx.x...:.:. 8M1D53M 49/61 80.3% 61/94230402 0.0% 1/61 1.6% -19234371 -74996031 +3302 chr4 + 190214555 11604502 11604501 11604560 59 AATTTTACTA---------TCAACAGCAACAAAAAAAAAAAAAAAGGAAAAGAAAACTTCAATAAAAG chr4 + 94230402 63622198 63622197 63622265 63622198 63622197 63622265 68 AGTTTTACTGAGCCAACACTCAGCTTTAACAAAAAAAAAAAAAAAGGCAAAAAAAACCCCAATAAAAG .:.......:---------...:.xx:....................x...:.....::......... 10M9I49M 49/59 83.1% 68/94230402 0.0% 9/59 15.3% -52017696 -42212706 +3643 chr4 + 190214555 11620110 11620109 11620198 89 GCATTCAAAGGCATCCTGGGCTGCATGTGACCCATGGACTGTGGGTTGGACACGCTTGATCTAGACTGTCTACCTTAGAGATCCTATCC chr4 + 94230402 83270674 83270673 83270762 83270674 83270673 83270762 89 GCACTGTGAGCTGTGCCAGGTTGCATGCAGCCTGTGGACTGTGAGTTAGACATGCTTGGTCTGGTGTATCTGTTTTAGAAGCTCCACTC ...:.xx:..x::.x.::..:......:::..::.........:...:....:.....:...:.xx.:...:::.....::::.:.::. 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% -71650564 -22579838 +3121 chr4 + 190214555 11633357 11633356 11633424 68 GTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCACGGAGGCAGAGGTTGCAG chr4 + 94230402 76033210 76033209 76033277 76033210 76033209 76033277 68 GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:....:...........::........x.xx.x...x.:........xx.:..x:xx:..:..:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -64399853 -29830549 +3240 chr4 + 190214555 11662928 11662927 11663037 110 TAAAAAAAACATAAAGGCGGGGGGTGGGGGTGGTGGGGGAATAATGATGAAGTTTTCAATTAGAACAGAAATGTTAATGTACATGATTTTAAATTTTGATTTTTTTAAAA chr4 + 94230402 87677806 87677805 87677915 87677806 87677805 87677915 110 TAACAAGAAAACTTGGGTGGAGGGGATGAGGAGAGGGGAATTTTAGAGGAAATTTTTTAATTTTACTGAATCAATAATGTCACTGATCTTAAATTTTGATGTTTTTAAAA ...x..:..x.:xx:..:..:...x:x.:.x:.x....:.x.xxx..x...:....:x.x.xxx..x...x::x......xxx....:............x......... 110M 71/110 64.5% 110/94230402 0.0% 0/110 0.0% -76014878 -18215524 +3257 chr4 + 190214555 11666964 11666963 11667029 66 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTAAGCCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x....:.:...........::........x.xx.x...x::...:.:.....:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% -64366237 -29864165 +3158 chr4 + 190214555 11668184 11668183 11668273 90 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGTGGAGCTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.x......:...........::........x.xx.x...xx:.x.........:..x.xx:.x:..:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% -64365022 -29865380 +3136 chr4 + 190214555 11669828 11669827 11669887 60 TCTTTTCTTTTATCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTGGTTTCTTTGTCT chr4 + 94230402 14546098 14546097 14546157 14546098 14546097 14546157 60 TCTTTTCTTTCATCTGTCTCTTCTTTTTTTCCTTTCATCTGGTTTTTGCTTCTCTTGCTT ..........:....x.:....:........:...:x.:.xx......x..:::...::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -2876270 -91354132 +3109 chr4 + 190214555 11717478 11717477 11717541 64 TGTGTGTATATATATATATACATATACATATATATATGTATATGTATATATATATATACATATA chr4 + 94230402 56867300 56867299 56867363 56867300 56867299 56867363 64 TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .......:x...:...:.:.:...:..xx......x...::.........:.x:...::.:.:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -45149822 -49080580 +3126 chr4 + 190214555 11739769 11739768 11739819 51 ATGGCTATTTCTGGTTTTGTTTTTGTTTGTTTGTTTTTGTTTTGTTTTTAT chr4 + 94230402 47076074 47076073 47076124 47076074 47076073 47076124 51 ATGGATTTTTCTGGGTTTTTGTTTGTCTGTTTGTCTTTGTTTTGTTTGCAT ....x.x.......x...x.x.....:.......:............x:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -35336305 -58894097 +3669 chr4 + 190214555 11758168 11758167 11758237 70 CATGGTGGTGCGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.......--..x....:.:...........::........x.xxxx...x.............:.. 11M2D57M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% -64275029 -29955373 +3045 chr4 + 190214555 11819785 11819784 11819838 54 GTGTGAGAATAAAGATGAAGCTTGGATGAGAGAAAAGGGAGAGCCCTAATCCCA chr4 + 94230402 2482588 2482587 2482641 2482588 2482587 2482641 54 GTGTAAGGATAGAGATGAAGCCTTGCTGTGAGGAAGGAGGGAGCCCCTGTCCCA ....:..:...:.........:.x.x..x...:..:.:.:......:x:..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 9337197 NA +3156 chr4 + 190214555 11845565 11845564 11845647 83 CACGGTGCTATGCTCCTGTAGTCCCAGCTAATCAAGAGGCTGAGGTGGGAGGATCACCTGAATCTGGAAGGTAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...--:...x.x......:.......x.::.:........x:xx.x.:.x...:....:.::....x.xx:.....:.. 7M2D74M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -64187632 -30042770 +21804 chr4 + 190214555 11869143 11869142 11869484 342 TTTTATTTACCTCACTTTCATTTGCCAATTTAGTAACTGGAGATAAACCAAATTGATGGGTTAAGATGACTTT--GTTCTGATTAATTTTATGGTAATTCTGAGGGCTTCCATTTTAAATTAATTGTTTGAATACTAAATTATGCAGCTTTATGATCCAGGAGATAAGCAGCAGCTCTAAAGATGCCTCTGAGACTTAAAAGAGACAGCATTAGAAGCTCATTATTGCCGGCACATTTAACATGGTTAAAGCAGGGGAAAATAGTCATTAAGTTAATGTAATAGTTAAACTGCATTAATTTGAAAAACTGCCCT-GTGAAGCACTTACAGCAGAGGATGCAATTT chr4 + 94230402 80843785 80843784 80844123 80843785 80843784 80844123 339 TTTTATTTATCTTAC----ACTTTCAAATTTGATAAATACAGGAAAACGGAAAGAACATGTTAAGATTTCTTTTTATTCTGATTAATTTTAAGGTAATTCACAGTGTTTCAGTTTTAAATGAATTGTTTGAATACTAAATTATGCAGCTTTATGATCCAAGAGATAAGCAG-AGCTCTAAAGATGCCTTTGAGACTTGAAAGAGACAGCATTAGAAACTCATTATTGCCGGCACATTTAACATGGTTAAAGTAGGGGAAAATAGACATTAAGTTAATGTAATAGTTAAACTGCATTAATTTGAAAAACTGCCCCAGCAAAATGCTTACAGT-GAGGATGCATCTT .........:..:..----.:..x.x.....::...x.:x..:x....x:..xx:.::x........xx....--:...............x........xx..x.:...x:........x......................................:...........-................:........:..................:..................................:............x................................................:-.::..:::.......:-.........x:.. 15M4D54M2I96M1D142M1I16M1D13M 290/336 86.3% 339/94230402 0.0% 9/336 2.7% -68974642 -25255760 +3175 chr4 + 190214555 11880581 11880580 11880703 123 ATCTGGAGGCAGAAAGAAACTATATATACATATATATGCACATATGTGTGTATATATGTATGTATATAAAAACATATGCATGAATATGTGTACATATATGAATGTGTATATGTACATGTATAT chr4 + 94230402 21109170 21109169 21109292 21109170 21109169 21109292 123 ATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATAT .....:.::xx:.:::..x:.::x.......:.:.:.x:x::.:x.:..:.x........:x:.:...x.xx.:.:.:.x.:x.::.:.....x:..::xxx...........::...x.... 123M 70/123 56.9% 123/94230402 0.0% 0/123 0.0% -9228589 -85001813 +3051 chr4 + 190214555 11880756 11880755 11880797 42 TATGTGTAGATATATGTATGGTGTGTGTGTATGTGTGTGTGT chr4 + 94230402 86234575 86234574 86234616 86234575 86234574 86234616 42 TATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTGT ...x.....x..x......::..................... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -74353819 -19876583 +3124 chr4 + 190214555 11891949 11891948 11892062 114 TTAGAAGATAACTTTCTCATCATAAAGGCCATTTATATATAT-----ATATATATATATATATATATATATATATATACACACACACACAGTTATCATCATACCATCTGCTGAAAGACT chr4 + 94230402 53944191 53944190 53944309 53944191 53944190 53944309 119 TCAGATGATAACTGTGCAATCAACTTAGACAGCTTTATAGCTTGCCAGTATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACAATGGCTGCTGACAAACT .:...x.......x.x:x....xxxx:.x..x:.x....xx.-----:......:x...:.x.x..x..x.....::.............xx:..:.x..:.x::x.......x.:... 42M5I72M 75/114 65.8% 119/94230402 0.0% 5/114 4.4% -42052242 -52178160 +3111 chr4 + 190214555 11920995 11920994 11921092 98 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCAATTGCATACATTTTAAAAGACTCTTTAGCCAAAGCTAATCACACGGCT chr4 + 94230402 59174268 59174267 59174353 59174268 59174267 59174353 86 TCTCAGAAAAAAAAAATGAAACAAAACAAAGAAACAAACAAACAAATCCCACTGGATAATCTATGCAAGAT------------ACTGATCACATGTCT .....:..........x:...x....x...:...x...x...x....:.x.:..x...xx:.x.:x....:------------:..:......:.x.. 71M12D15M 62/86 72.1% 86/94230402 0.0% 12/86 14.0% -47253273 -46977129 +3037 chr4 + 190214555 11925058 11925057 11925180 123 CCTGCACATTCTGCACATGTGT------CCCAGAACTTAAAGTACTAAAAAAAAAAAAAAAAAAAAAAAAACCCCAAGTTAAATGTCAACATGTCTAAGAAAGCTGTTTCTTTCCCTTCCTTACCACCA chr4 + 94230402 86302669 86302668 86302796 86302669 86302668 86302796 128 CCTGCAC-TTCTACCAGTATGTAATCCTCCTTTCACCCGACATATTAAAACAAAAAAACAAACAAAAAAAAACCAAATGCAAGCATAAATACATTCAAGAAGTGTGGCGAATTCCCTCCTCCACCCCCA .......-....:.xx:.:...------..:xxx..:::.x:..:.....x.......x...x........x..x..xx:..:::.x..:.::.::.....:xx..x:xxx......:.:::...x... 7M1D14M6I101M 77/122 63.1% 128/94230402 0.0% 7/122 5.7% -74377611 -19852791 +3146 chr4 + 190214555 11933968 11933967 11934023 56 ATTCCTCTCTCTCCTTCTCTCTCTTTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 81856250 81856249 81856304 81856250 81856249 81856304 55 ATTCCTATTT-TCCTTCTCTCTCCTGCTCTCTCTCTCTCCTTTACACATGCAAATA ......x.:.-............:.x.............::.:.....::..x.:. 10M1D45M 44/55 80.0% 55/94230402 0.0% 1/55 1.8% -69922282 -24308120 +3222 chr4 + 190214555 11933986 11933985 11934025 40 CTCTCTTTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..:................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -63314063 -30916339 +3436 chr4 + 190214555 11933988 11933987 11934027 40 CTCTTTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:::................................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -63314061 -30916341 +3475 chr4 + 190214555 11933990 11933989 11934029 40 CTTTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................x.................. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -63314059 -30916343 +3216 chr4 + 190214555 11933993 11933992 11934027 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ........................:.......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -667312 -93563090 +3102 chr4 + 190214555 11933994 11933993 11934029 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -667310 -93563092 +3046 chr4 + 190214555 11986082 11986081 11986136 55 TATATATATATAGACATTTATATGTGTGTGTGTGTGTGTGTGTGTGTGCATGTAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....:.:x.::..x.xx..............:.........::..:...:... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -15339420 -78890982 +4131 chr4 + 190214555 12065470 12065469 12065566 97 CTGTGTATATTTATACATGCACACTTGTGTATTTTTATATGTATATGTACATACACACACACACACACACACACACATATATGTA---TATACTTAAAAT chr4 + 94230402 58675361 58675360 58675460 58675361 58675360 58675460 100 CTGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAAT ....x.:.....:x..x..x.:x::.::::..:...:....:....:..:.:..x..:.::::.........x..x......x..---............ 85M3I12M 68/97 70.1% 100/94230402 0.0% 3/97 3.1% -46609891 -47620511 +3487 chr4 + 190214555 12065499 12065498 12065576 78 TATTTTTATATGTATATGTACATACACACACACACACACACACACACATATATGTATATACTT--AAAATACAAGTTGCT chr4 + 94230402 46140842 46140841 46140920 46140842 46140841 46140920 79 TATTATTTTGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAAGGTGCT ....x..x.:....-..:..:..........x.x....:........:.:...:..:.x....--.:..xx....x.... 14M1D48M2I15M 60/77 77.9% 79/94230402 0.0% 3/77 3.9% -34075343 -60155059 +3099 chr4 + 190214555 12079919 12079918 12079994 76 AATGCTTTAAATAAATATATATATATACACACACACACACACATGCACACACACACACACATATATACACATATAT chr4 + 94230402 74526048 74526047 74526123 74526048 74526047 74526123 76 AATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ...::.x..:..x:.x.x.:.:xx.x.:x................x...:.....x.:.:...::..:.:..:... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -62446129 -31784273 +3235 chr4 + 190214555 12080638 12080637 12080706 69 GGAGAAAAAATAAAACAAAAGGAAGCACTAGAAGAAAACTAGACACAACAAGTAGACATGAAGAAAGAA chr4 + 94230402 41925061 41925060 41925129 41925061 41925060 41925129 69 GGAGGAAAAAAAAAACAAAAAAAAACACAGGGAGACAATCAGGTACATCACGTGAAAGTGAAGGAATAA ....:.....x.........::..:...x:.:...x..::..::...x..x..::.x:.....:..x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -29844423 -64385979 +3164 chr4 + 190214555 12106174 12106173 12106226 53 CAGTGAAAACCTTCATTTCTTTTTTCTTTCTTTCTTTTTTTTCTTGTTTTAAG chr4 + 94230402 28794616 28794615 28794668 28794616 28794615 28794668 53 CAGTAAAAATCTTCATTTTTTTTTTCTACTGTTCCTCTTTTTTTTTTCTTAAG ....:....:........:........x::x...:.:.....:..x.:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -16688442 -77541960 +3129 chr4 + 190214555 12154117 12154116 12154181 65 GTTTTGTGGTTCTCTTCCTTCTTTCTTTTTCTTCCTGTCTTCTTCTATTGAAGGTGTTCTTTTTT chr4 + 94230402 851972 851971 852036 851972 851971 852036 65 GCTTTGTCCTTTCCTTTCTTCTTTCTTTTTGTTCCTCTCCTCTCGTTTTGTGGGTTTTTATTTTT .:.....xx..::...:.............x.....x..:...:x.x...x:...x..:x..... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 11302145 NA +3010 chr4 + 190214555 12181928 12181927 12181983 56 CTGTAAAAAAAAAAAAATATATATATATATATATATATATATATATACACACACAC chr4 + 94230402 60163456 60163455 60163511 60163456 60163455 60163511 56 CTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACAC ..:.xx.::....x..............:.:........x..:.:x.x........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -47981528 -46248874 +3072 chr4 + 190214555 12181941 12181940 12182032 92 AAAATATATATATATATATATATATATATATATACACACACAC-----------ACATTTATATATATGTGCATATATATATATATATATATATATCCTATTT chr4 + 94230402 82013191 82013190 82013292 82013191 82013190 82013292 102 AAAGTGTCCATCTTCATATAGA-GTCTGCATAAGAACACAAACTTTGCACAGTAAAATTTGTATATGTATGCATATATGCATGTATACATATATCTCCTTTTT ...:.:.x:..x.x:.....x.-:.x.::...x:x.....x..-----------.x....:.....:.:.........::..:....:......x....x... 22M1D20M11I49M 65/91 71.4% 102/94230402 0.0% 12/91 13.2% -69831250 -24399152 +3337 chr4 + 190214555 12181951 12181950 12182024 74 TATATATATATATATATATATATACACACACACACATTTATATATATGTGCATATATATATATATATATATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ....:....-.:.:.:.:x...:.:.....:.:...::x......x.......:......:.x:...:..:.:. 9M1D64M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% -44685340 -49545062 +3579 chr4 + 190214555 12183631 12183630 12183730 100 GAGAGAAAAGAAAGAAACAAAAAGAAAGAAAAGAA--------AGGAAAAGAAAAGAAAGAAAAAGGAAAGAAAGGAAGGAAAAGAAAGAAAAAGAAAAGAAAGAAGG chr4 + 94230402 75527798 75527797 75527905 75527798 75527797 75527905 108 GAGTGTATATGAAAACTCAGAAGGAAAAATATTAACCACGTACAGGAAGAGATGAGAAAGAAAAGGGGAACAAAGCAAAGTACAGACTGAAAAAAAAATGAAGGAAGG ...x.x.x.x:..:.xx..:..:....:.x.xx..--------.....:...x:..........:..:..x....x..:.x.x...xx......:...x...:..... 35M8I65M 71/100 71.0% 108/94230402 0.0% 8/100 8.0% -63344167 -30886235 +3310 chr4 + 190214555 12183634 12183633 12183729 96 AGAAAAGAAAGAAA-CAAAAAGAAAGAAAAG------AAAGGAAAAGAAAAGAAAGAAAAAGGAAAGAAAGGA----AGGAAAAGAAAGAAAAAGAAAAGAAAGAAG chr4 + 94230402 65363838 65363837 65363944 65363838 65363837 65363944 107 AGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAG .....x....:.x.-...::x......:...------....:....x..:::.....::..:x.x........----.....:...x::.....x:.x..:...x.. 14M1I16M6I36M4I30M 70/96 72.9% 107/94230402 0.0% 11/96 11.5% -53180204 -41050198 +3120 chr4 + 190214555 12198766 12198765 12198826 61 AGAAGAAGAGGAAGAGAAAGAAAGAGAGAGAGAGAGGAGGGAGAGAGGAGGAGGGAGGGAG chr4 + 94230402 77211992 77211991 77212052 77211992 77211991 77212052 61 AGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAG ...x:..x.....::.:..::..:.x:.......:....:.........:x..::x..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -65013226 -29217176 +3093 chr4 + 190214555 12230809 12230808 12230869 61 TTTCATCCTAAAATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATGGAGTCTG chr4 + 94230402 38615407 38615406 38615467 38615407 38615406 38615467 61 TCTCATACTGAAGTACTCTTTTTTTGTTTTTGTTTTTTTTTTCACTTTTTTATGTAGTCTG .:....x..:..:.:x.:.......x.....x..........:x:....xx...x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -26384598 -67845804 +3114 chr4 + 190214555 12237438 12237437 12237489 52 ACTATATACCTCCCAACTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248037 75248036 75248088 75248037 75248036 75248088 52 ACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x.x...xx...:xx...................x.x.............. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -63010599 -31219803 +3298 chr4 + 190214555 12237440 12237439 12237491 52 TATATACCTCCCAACTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601288 12601287 12601339 12601288 12601287 12601339 52 TAAATACTGTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..x....:x:xx...x...................x.....:.......... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -363848 -93866554 +3473 chr4 + 190214555 12237452 12237451 12237495 44 AACTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248045 75248044 75248088 75248045 75248044 75248088 44 AATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..::.................x.................. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -63010593 -31219809 +3567 chr4 + 190214555 12237454 12237453 12237493 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -63010595 -31219807 +3224 chr4 + 190214555 12237456 12237455 12237491 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa ...................x................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -63010597 -31219805 +3139 chr4 + 190214555 12237458 12237457 12237497 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -63010591 -31219811 +3316 chr4 + 190214555 12237458 12237457 12237493 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -363846 -93866556 +3102 chr4 + 190214555 12237460 12237459 12237495 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -363844 -93866558 +3692 chr4 + 190214555 12237973 12237972 12238045 73 TGGAGATCATGTCTCCACAAATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857590 6857589 6857662 6857590 6857589 6857662 73 TGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ...:x..x..x:...x.x.........::..:...::....x..:.......x...........x..x.x... 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 5380383 NA +3212 chr4 + 190214555 12237980 12237979 12238047 68 CATGTCTCCACAA-ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATA chr4 + 94230402 6857594 6857593 6857662 6857594 6857593 6857662 69 CATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ...:x:...x...-.x.......::..:...::....x..........x...........x.:x.x... 13M1I55M 52/68 76.5% 69/94230402 0.0% 1/68 1.5% 5380386 NA +3019 chr4 + 190214555 12237994 12237993 12238048 55 TATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....:.:x.:x.:x..x....:.........:.........::...:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -15087508 -79142894 +3019 chr4 + 190214555 12237996 12237995 12238050 55 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....:.:x.:x.:x..x..............:.........:::..:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -15087506 -79142896 +3145 chr4 + 190214555 12238005 12238004 12238071 67 ATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.:..:......:..x.::::...x::.....:.x......:......::xx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -33825294 -60405108 +3447 chr4 + 190214555 12238008 12238007 12238081 74 TATATATATATGTGTGTGTGTGTGTGTGTG------TGTATATATATATATATATATAAATATATATATATACACACACA chr4 + 94230402 85834533 85834532 85834612 85834533 85834532 85834612 80 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...x:..x.:...x................------....x::...:....:..x...x..:.x...::.:...:..... 30M6I44M 56/74 75.7% 80/94230402 0.0% 6/74 8.1% -73596525 -20633877 +4031 chr4 + 190214555 12238010 12238009 12238092 83 TATATATATGTGTGTGTGTGTGTGTGTGTGTATATATAT----ATATATATATAAATATATATATATACACACACAGAGACACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT----ACACACAT ...x:..x.....x...................xx..:.----...:....:......:..:.x...:......:----........ 39M4I32M4D8M 65/79 82.3% 83/94230402 0.0% 8/79 10.1% -73596523 -20633879 +3242 chr4 + 190214555 12238014 12238013 12238081 68 TATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATATATATACACACACA chr4 + 94230402 70094142 70094141 70094209 70094142 70094141 70094209 68 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA .:..x:.:.......x...x...x.....:.....:......x.:.:x.x:...x.....:.::.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -57856128 -36374274 +3141 chr4 + 190214555 12238054 12238053 12238093 40 TATATAAATATATATATATACACACACAGAGACACACATA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.x...............................:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 7828972 NA +3029 chr4 + 190214555 12246228 12246227 12246296 69 CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCTTTCTTTTTCTTTCTTTTCTTTATTTCTTTCTTTC chr4 + 94230402 19215399 19215398 19215467 19215399 19215398 19215467 69 CCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTC ...x.xx:...:.......:...:..:.::...:...:.xx....xx.xx.........::...x.... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -6969171 -87261231 +3114 chr4 + 190214555 12246281 12246280 12246347 67 TTTATTTCTTTCTTTCCATCTACCTATTTGTCTATCTATCTATCTATCTGTCTATCTATCTATCTAT chr4 + 94230402 37955232 37955231 37955298 37955232 37955231 37955298 67 TTTGTTTGCTTCTTTGTACACGTCCACCTGTCTACCCATCTCTTTCTCTGTCTACCTACATATCTAT ...:...x:......x:.:x:::.:.::......:.:....x.:.x........:...:x....... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -25708951 -68521451 +3213 chr4 + 190214555 12250785 12250784 12250841 57 CACACACACACACACACACAAACAGAGAGAGAGAGAAGA---AAAGAAAAGAAAAGAAAG chr4 + 94230402 34021849 34021848 34021908 34021849 34021848 34021908 60 CACACACACAGACACACACACGCAGCGAGAGAGAAAAGATTCAAAATGAAGACAGGAAAG ..........x.........x:...x........:....---...:x:....x.:..... 39M3I18M 47/57 82.5% 60/94230402 0.0% 3/57 5.3% -21771064 -72459338 +3237 chr4 + 190214555 12352931 12352930 12353002 72 GTGCCTGTAATCCCAGCTACTTGGGAGGGTGAGGCAGGAGGATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::...x....x.xx.x.:.x.:...........:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -63680275 -30550127 +3086 chr4 + 190214555 12381644 12381643 12381695 52 AATGAAAAAAAAAAAACACAAACAAACACAAAAACAAAACAAACAAACAAAA chr4 + 94230402 55041092 55041091 55041143 55041092 55041091 55041143 52 AATGGAGAAAAAAAAACACACCCAAAAACAAACCCAGAAAAAGCAAACAAAA ....:.:.............xx....x.....xx..:..x..:......... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -42659448 -51570954 +3003 chr4 + 190214555 12405926 12405925 12405984 59 GCAACTGTAATCCCACCTACTCAGGAGGCTGAGTCAGGAGAATCATTTGGACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...xx....:.:...x.....::::........:.xx.x...x..:...:......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -63627280 -30603122 +3156 chr4 + 190214555 12416350 12416349 12416426 77 CACAATACTATACTGCCTGAAAAAAAAAAAAAAAAAAAAAAACAGATAAAGGAAACAAACAAAAAGAAAAGAAGGAA chr4 + 94230402 38128954 38128953 38129030 38128954 38128953 38129030 77 CACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAA .......xx..xx..::.x:x..xx.:....::x..x.........x.:.::...:...x..........x...... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -25712604 -68517798 +3071 chr4 + 190214555 12416375 12416374 12416439 65 AAAAAAAAAAAAAAAAACAGATAAAGGAAACAAACAAAAAGAAAAGAAGGAAGAAAGAAAAAAAA chr4 + 94230402 7076627 7076626 7076691 7076627 7076626 7076691 65 AGAAAAAGAAAACAAAACAAACCAATGAAACAAACAACAACAAAAAAAGCACCACAGAAACCAAA .:.....:....x......:.:x..x...........x..x....:...x.xx.x.....xx... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 5339748 NA +3129 chr4 + 190214555 12430102 12430101 12430188 87 CTCTTTCTCTCTTTGACTCCCTGTCTTTCTGTCTCTTTCTCTCTCTGCTTCTCTCTTTCTCTCTCTCTCTTTGACTCTCTGTCTTTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTG--TCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..:.....:.::...--........:.:..x:::.:..:xx::x...:..:...:.:......:..:x....x.:.xx....:.:.. 15M2D70M 55/85 64.7% 85/94230402 0.0% 2/85 2.4% -44941924 -49288478 +3298 chr4 + 190214555 12533245 12533244 12533311 67 TGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAACCATTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::...:....x.xx.x...x..:........:.:..x.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -63499966 -30730436 +3261 chr4 + 190214555 12604547 12604546 12604606 60 ATATTCATTGCTGTTATTGTCTTTATTATTATTGTTTTTTTTTTTTTTTGCTTTAGTTCA chr4 + 94230402 8689530 8689529 8689587 8689530 8689529 8689587 58 ATATTGGTTGCTGTTATTGATTTTTTTGTTGTTGTTTTTTTTCCTTTT--CTTTGATTCA .....x:............x:...x..:..:...........::....--....::.... 48M2D10M 47/58 81.0% 58/94230402 0.0% 2/58 3.4% 3915017 NA +3272 chr4 + 190214555 12614176 12614175 12614360 185 ATGTGTTTTAGTTTTTATCACTATCCAGCATTAAATTCTG-TGGGTCTTCTCTCTCTTTCTTT-CTTTCTTTCCTTCTTTCTTTCTTTCT-------TTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 53543203 53543202 53543391 53543203 53543202 53543391 189 ATGATTTGTAGTTCTT-----CATCCAGACTAAAACCCAGATTGATTTCCCCAAGCTCCCTGTGCTTATTTACATTCTTGCTTTTTCTCTACTCTGATTTTCTCCATTGGTCCTGTGTGTTTCCTTTTATTCTGTGGGTTGTTTTTTTTAATTTCCATTCAGTCTATTTTCAGTCTATTTTTCTTCCTTGCTTT ...xx..x.....:..-----:......xx.x...::.x.-.x.:.:.:.:.xxx..::..x.-...x:..x.x.....x....:.:...-------......::x.:xx....x.x.x:..:....:x..:.x.xxx.:x..:.:...xx:....x..:xx.:.x.....xx...x.:......:...x.... 16M5D19M1I22M1I26M7I97M 114/180 63.3% 189/94230402 0.0% 14/180 7.8% -40929027 -53301375 +3012 chr4 + 190214555 12614220 12614219 12614288 69 TCTTCTCTCTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTT chr4 + 94230402 86518999 86518998 86519067 86518999 86518998 86519067 69 TCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTT .....:...:..:....x:..:xx..::......:...:...........x::.:.xx..:..xx.:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -73904779 -20325623 +4100 chr4 + 190214555 12614222 12614221 12614460 239 TTCTCTCTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTT------------TCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTT-----------CTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCCTTCTTTTCTTTCT chr4 + 94230402 19215305 19215304 19215564 19215305 19215304 19215564 260 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTT--TTTTCTGCCTTATATTTTTCTATCCTCTGTCT ......x:...:..:...x.:xx.xxx.:...x...:x..:.:..------------.x..:.x.....x...:..xx:x:x....:::.-----------.:::.:.:.:.:.:::.....::....:....xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......::x.:.:.:..x..x......xxxx.:.::...xx...--...:..x....x:x...:::.x.::...x... 45M12I33M11I127M2D32M 139/237 58.6% 260/94230402 0.0% 25/237 10.5% -6601083 -87629319 +3629 chr4 + 190214555 12614228 12614227 12614358 131 CTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTT--TCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTC--TTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 33237630 33237629 33237764 33237630 33237629 33237764 135 CTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTTGGTCT ..x.:...:..x.:::.:x..x:..x.x.x..x--.:..:.:....x.....xx...x.....::x:::.x....:...x....:..--..:..:.:.....:..x.....x.::.x....x.:...:.:xx... 33M2I52M2I46M 84/131 64.1% 135/94230402 0.0% 4/131 3.1% -20623402 -73607000 +3531 chr4 + 190214555 12614229 12614228 12614320 92 TCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTC---TTTCTCTTTCTCTTTCCCTT chr4 + 94230402 48874898 48874897 48874992 48874898 48874897 48874992 95 TCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .....x...:::.:..x:..:..x::.x.........x...x.:x...:.:......x...::..:x.:...---.x.:.x.x............ 72M3I20M 64/92 69.6% 95/94230402 0.0% 3/92 3.3% -36260669 -57969733 +3464 chr4 + 190214555 12614232 12614231 12614331 100 TTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:......:x..::.:.x....xx.:.:.x...:xxx...:.x:.:....x:xx.:.....:..:.:.::.:.:.::.........:x... 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% -51082908 -43147494 +3857 chr4 + 190214555 12614241 12614240 12614367 127 TCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874866 48874865 48874992 48874866 48874865 48874992 127 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .::.::......:x:x.x.:.......x.xxx.....x:.:..:.:..x::.:..x:..x.:.:.....x...x.:x.......:....x.:..:.:.x....::xx.x...x.x...:.:.::... 127M 78/127 61.4% 127/94230402 0.0% 0/127 0.0% -36260625 -57969777 +3059 chr4 + 190214555 12614275 12614274 12614352 78 TTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTT chr4 + 94230402 39929912 39929911 39929989 39929912 39929911 39929989 78 TTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTTGGCTTCCTTTCCTCTCCATGTCTTTCTCCCTCCCTTT ....:...x..:.x.:..xxx..xx:...:.:...:.:...xx........:..:.:.x.x.......::..::.... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -27315637 -66914765 +3499 chr4 + 190214555 12614284 12614283 12614378 95 TTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.....x.......xx::.....:....:::....x..:xx:...x.::..x:x.:.....x.....::..::.:...... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% -70712650 -23517752 +3219 chr4 + 190214555 12614287 12614286 12614381 95 TTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531216 30531215 30531310 30531216 30531215 30531310 95 TTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC .....:.....:....x:xx......x.:..x..::...x.:x.xxx...:x:.x:.x:.x.:x.:.::...x.....:..:...:......... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% -17916929 -76313473 +3104 chr4 + 190214555 12614288 12614287 12614382 95 TTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x..:x.:x...:.x...:.:.xx.::.....::..:.....:x..:xx:...x.::..x:x.:.....x.....::..::.:...... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% -70712646 -23517756 +3233 chr4 + 190214555 12614294 12614293 12614378 85 CTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCC-TCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..........:::.x..:..x...-.:.:.:.:.:...xx:.x..x.:.........:...::...x.....x..xx:.x..... 24M1D60M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% -44757732 -49472670 +4019 chr4 + 190214555 12614300 12614299 12614422 123 CTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT------TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x.:::....:..:..xx:x......:..:.....:.:x..::.:.x....xx....------.x....xxx:::..x....:.:x.xx.......:...:::....:...:........ 60M6D57M 77/117 65.8% 117/94230402 0.0% 6/117 5.1% -51082817 -43147585 +3245 chr4 + 190214555 12614300 12614299 12614382 83 CTTTCTCTTTCTCTTTCCCT-TCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:.....:::.x.....-....::.::.::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 20M1I63M 57/83 68.7% 84/94230402 0.0% 1/83 1.2% -44757726 -49472676 +3359 chr4 + 190214555 12614301 12614300 12614391 91 TTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT chr4 + 94230402 26457973 26457972 26458061 26457973 26457972 26458061 89 TTTCCCATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATTCTCCTGCCCTGTTTC--TCATTTCCTCTTTCATTCACCCTTTTCT ....:.x....:...:.....xx..:......:..:..x::..x:.:..:.x.::.x....--..x..:::......x...x::....:.. 61M2D28M 60/89 67.4% 89/94230402 0.0% 2/89 2.2% -13843672 -80386730 +3100 chr4 + 190214555 12614301 12614300 12614409 109 TTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTT-----CTTTCCTTCTT--TCTTTCCTTCCTTT chr4 + 94230402 33934176 33934175 33934296 33934176 33934175 33934296 121 TTTATCCTTCTATTTACTTGCTTTTTTTTCTCATGTAGTGTTATCTTTTTTTTTTCCCTTCTTTCTTTCGTGCATGTTCAGAGCTGTTTAATAACTTTTCTCCTTAATGTCTTTTTCCTTT ...x..:....x...x.:.x.:....:..:..x.x.xx.x:.x.....:...:..:.:...........x.x.x.x:.-----:.x...-----....:..:...--.x.:.::....... 78M5I6M5I11M2I14M 76/109 69.7% 121/94230402 0.0% 12/109 11.0% -21319875 -72910527 +4061 chr4 + 190214555 12614319 12614318 12614457 139 TTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTT-------TCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCCTTCTTTTCTT chr4 + 94230402 50176268 50176267 50176414 50176268 50176267 50176414 147 TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...:x.:..x:.x..:.:.......:....x.:-------.:..x.x..x..::..::x......x.-...x..:..x:............:.:xxxx:..x:.:::..x..:::..x.:......:....:..::.:..:x..... 33M7I27M1I79M 89/139 64.0% 147/94230402 0.0% 8/139 5.8% -37561949 -56668453 +3685 chr4 + 190214555 12614325 12614324 12614445 121 TTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTC---ACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:.:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx....:x:.:....---x.xx..:...::...::..:........:.:.:...:x... 77M3D41M 74/118 62.7% 118/94230402 0.0% 3/118 2.5% -51082797 -43147605 +3336 chr4 + 190214555 12614325 12614324 12614440 116 TTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCCTTCCTTT chr4 + 94230402 63697118 63697117 63697233 63697118 63697117 63697233 116 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ..:x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.::...x:xx:...:..::.::::....::..:........ 116M 67/116 57.8% 116/94230402 0.0% 0/116 0.0% -51082793 -43147609 +3544 chr4 + 190214555 12614337 12614336 12614449 113 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTC--------CTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCCTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.....x...:--------...:..:...::.....:...:...:.:...:x.. 13M1I65M8I35M 75/113 66.4% 122/94230402 0.0% 9/113 8.0% -51082780 -43147622 +3243 chr4 + 190214555 12648756 12648755 12648839 84 ATACATGTGTGTATATATAATATACATATATGTGTGTATATAATATATACATATGTGTGCATACATAATATATATATGTGTGTA chr4 + 94230402 72800215 72800214 72800297 72800215 72800214 72800297 83 ATAGAGTTGTTTATATATAATATACATATGTTCATGTGTCAAATATATATATATGCACGCTATTAAAATATG-ATCTGTGTCTA ...x.xx...x..................:.x::...:.xx........:.....:::..xxx:.x.....:-..x.....x.. 72M1D11M 60/83 72.3% 83/94230402 0.0% 1/83 1.2% -60151459 -34078943 +3024 chr4 + 190214555 12660467 12660466 12660540 74 AAAGGAGAGAAAGAGAGGGATAAAGAAAAATAGAAAAAAAGGAAGAAAGAAAAGAGAAAGGAAGGGAAGGAGAG chr4 + 94230402 94029721 94029720 94029794 94029721 94029720 94029794 74 AAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAAGAGGGATGAG ...:...:.:::.:.:.::........:..x:............:..x:..xx.x.x..x...:.:::.:x... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -81369254 -12861148 +3009 chr4 + 190214555 12660489 12660488 12660535 47 AAGAAAAATAGAAAAAAAGGAAGAAAGAAAAGAGAAAGGAAGGGAAG chr4 + 94230402 33387622 33387621 33387668 33387622 33387621 33387668 47 AAGAGAAATGGAAAACCACGAAGAAAGAAAGGAAAAAGAAAAGGAAG ....:....:.....xx.x...........:..:....:..:..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -20727133 -73503269 +3937 chr4 + 190214555 12665771 12665770 12666023 253 ATAATATATATTTTTATATATTATATATTTTATATATTATATCATATATATAATATATTTTATATATATTTTATATACAATATATAATGTATTTTATATATATTTTATATACAATATATAATATATTTTCTATATATTTTATATATAATATATAATATATTTTCTATATATTTTATATATAATATAT------AATATTTTTATATATATTTTATATATAAAATATATTATATATAATATATTTTATATATAAAATATA chr4 + 94230402 26320199 26320198 26320414 26320199 26320198 26320414 216 ATAAAATATTTTCTTATATGTA------TTCAAATGTTG------ATATTTAAT-CAGCTTAAATTTATCTCACAT------------GTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCT-----------AATAGTATATTTTT--AGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTA-GTATGAAAAATTAAGTGTG----ATTTTATTCCTAAAATGTA ....x....x..:......:.x------..:.x..:..:------....x....-:.x:...x..x...:.:.:..------------....x.xx..:.....x.......x.....:.........x:...:...:.-----------x...:........:--x:....x.....:.....x.x------:x:..:x...:.x..x:...x..-:..x:.x.x....x:.:.:----.......x:x......:.. 22M6D11M6D9M1D21M12D51M11D14M2D21M6I23M1D19M4D19M 149/210 71.0% 216/94230402 0.0% 49/210 23.3% -13654428 -80575974 +4296 chr4 + 190214555 12665802 12665801 12665985 184 ATATATTATATCATATATATAATATATT-TTATATATATTTTATATACAATATATAATGTATTTTATATATATTTTATATACAATATATAATATATTTTCTATATATTTTATATATAATATATAATATATTTTCTATATATTTTATATATAATATATAATATTTTTATATATATTTTATATATAA chr4 + 94230402 26320183 26320182 26320342 26320183 26320182 26320342 160 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAAT-CAGCTTAAATTTATCTCACATG---TATATA---------CTACATATTATATATACTATATACAATATATTTATTATGTATCT---------AATAGTATATTTTTA---GTATTGTATATGTAA ..:..x.:.:....xx...x.....x..-......:....:x.xxxx::....x....-:.x:...x..x...:.:.:..:---......---------...:.....x......:x.....:.........x:...:...:.---------x...xx.........---:....x.....:... 28M1I29M1D22M3D6M9D44M9D15M3D15M 117/159 73.6% 160/94230402 0.0% 26/159 16.4% -13654381 -80576021 +3853 chr4 + 190214555 12665898 12665897 12666045 148 TTCTATATATTTTATATATAATATATAATATATTTTCT---ATATATTTTATATATAATATATAAT--------ATTTTT-----ATATATATTTTATATATAAAATATATTATATATAATATATTTTATATATAAAATATATTATATATAAAATATTTTATAT chr4 + 94230402 26320176 26320175 26320338 26320176 26320175 26320338 163 TTCTGTA-ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATAT ....:..-..x.x:.:.:.x..xx....x.........---..:....:x.xxxx.:....x....--------....x.-----..:.....x:..:....x.x.....:......:.........xx...:..xxxx...x.....x.xx.:....x..... 7M1D30M3I25M8I6M5I79M 106/147 72.1% 163/94230402 0.0% 17/147 11.6% -13654278 -80576124 +3512 chr4 + 190214555 12665972 12665971 12666129 158 TATTTTATATATAAAATATATTATATATAATATATTTT---ATATATA---AAATATATTATATATAA--------AAT--ATTTTATATAATATATATTAAATATAATATATATAATATATAAAATATATATATTATATATAATATAATATATAAAATATATATATTATATAT chr4 + 94230402 26320174 26320173 26320338 26320174 26320173 26320338 165 TGTTCTGTA-ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGT-TGATATTTAATCAGCTTAAATTTATCTCACATG-TATATACTACATAT--TATATATACTATATACAATATATTTATTATGTATCTAATAGTATAT----TTTTAGTATTGTATAT .:..:.:..-..:x.:.:.:.:..xx....x.......---....:..---....:.-.x....x...--------...--..:.:.:..:-......:..x....--........x......x.......x......:...xxx...:.....----.x.xx:....:..... 9M1D28M3I7M3I6M1D10M8I3M2I10M1D14M2D46M4D16M 114/149 76.5% 165/94230402 0.0% 25/149 16.8% -13654202 -80576200 +3385 chr4 + 190214555 12666139 12666138 12666237 99 TATAAAATATAAATATATAATATATTATATAAAATATATATATTATATATAATATATTATATAAAATA-----TATATAATATATAATATATTATATAAAATAT chr4 + 94230402 74777128 74777127 74777228 74777128 74777127 74777228 101 TATAAAATAAAAATGTATACAGTAAATTAATAAATGTATATATTTTGTACAATATGTAAAGTACAATGTTATTTATACATTAT---ATATATGATATGAAGTAT .........x....:....xx:..xxx..xx....:........x.:..:.....:.x.x:..x...:-----....:.x...---......x....:..:... 68M5I10M3D18M 71/96 74.0% 101/94230402 0.0% 8/96 8.3% -62110989 -32119413 +4204 chr4 + 190214555 12666192 12666191 12666390 199 ATATTATATAAAATATATATAATATATAATATATTATATAAAATATATATATTATATATAATATATTATATAAAATATATATATTATATAAAATATATAATA-------TATAATATATATATTTTAT-ATATAATGTAATATATATTATATATAAAATATTTTATA----TATATTATATATTATGTATAATATATATTTTATATATATT chr4 + 94230402 73633764 73633763 73633959 73633764 73633763 73633959 196 ATATCACATTGTAGAGATATAAGACA---------ACATCAAATATTAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaattattaaatattattt------CACGTTATAATGTTATGATATACATGGTAATTAACATTTGACTTAGAAATATT ....:.:..x:x.x.x......x.:.---------.:..x......xx.xx..x..x..x:..:x........x..x..:........:..x......x...-------.....x:...x.:......-...:..xx..x..x.......x.------:.:x.....----...:x....:..x:.:xx...:..x.:x:...x.x..... 26M9D67M7I19M1I23M6D9M4I40M 129/184 70.1% 196/94230402 0.0% 27/184 14.7% -60967572 -33262830 +6039 chr4 + 190214555 12666463 12666462 12666729 267 TATATATTATATATTATATATTTTATATAATATGTATTATAC-ATTATATATTATATATTTTATATAATATGTAT---TATATATTTTATATA------TATATATTATATATTTTATATATATATTATATATTTTATATAATATATATTATATATTTTATATATTTTATATAT-TATATATTTTA--TATATTTTATATATTATATATATTTTATATATTT----TATATTATATATTATATATTTTATATTATATATTATATATTATATATTTTATATTATA chr4 + 94230402 63976825 63976824 63977089 63976825 63976824 63977089 265 TAAATATTAAATGACTTCTATTTT---TAA-ATG-ATGATACTATTACATACTTTATCCTTTATAGCAAATGCAGATGTATAAACATAAGATAAAGACATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACA------ATATACATGTAAATTTTAACTATAGACTATATACTACA---GTTTTATATGACTAACataaattatttgatatttattttaaatta-----tatatattttagacattatattata ..x......x..:x:x.x......---...-...-..x....-....:...:.x...x:......xx.x...:.x---....x.:x.x.x...------..:....xxx....x::..::.......:...:x.x.x...........:..:........:.------.....:-.:..x......--....xx:......:..:.---:........:x:.----..x.....x.:x...x.......x....-----........x..x.:x.......... 24M3D3M1D3M1D7M1I32M3I15M6I63M6D6M1I11M2I18M3D13M4I28M5D25M 186/248 75.0% 265/94230402 0.0% 36/248 14.5% -51310362 -42920040 +4048 chr4 + 190214555 12666487 12666486 12666655 169 ATATAATATGTATTATACATTATATATTATATATTTTATATAATATGTATTATATATTTTATATATATATATTATATATTT------TATATATATATTATATATTTTATATAATATATATTATATATT--TTATATATTTTATATATTATATATTTTATATATTTTATATATTATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGT------CATTA---ATAAAATATTTTCTT--ATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----GTATATTTTTAGTATTGTATATGTAATA ..:..:.:...------.....---..x.x.......x.x--.........xx.xxx..x....x..xx:.x:x..x....------:..:......:..:.....x......x......:x.......--....:...:.x...----:........xx:....x.....:.x... 11M6D5M3D15M2D39M6I42M2I14M4D28M 115/154 74.7% 162/94230402 0.0% 23/154 14.9% -13653696 -80576706 +3562 chr4 + 190214555 12666603 12666602 12666697 95 ATATATTTTATATATTTTATATATTATATATTTTATATATTTTATATATTATATATATTTTATATATTTTATATTATATATTATATATTTTATAT chr4 + 94230402 26320249 26320248 26320338 26320249 26320248 26320338 90 ATTTATCTCACATGT---ATATACTACATATTATATATACT--ATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATAT ..x...:.:.:..:.---.....:..:.....x......:.--.....:x......x.x....:...:.x...x.....x..xx:....x..... 15M3D23M2D52M 68/90 75.6% 90/94230402 0.0% 5/90 5.6% -13653646 -80576756 +3677 chr4 + 190214555 12666612 12666611 12666704 93 ATATATTTTATATATTATATATTTTATATATTTTATATATTATATATATTTTATATATTTTATATTATATATTATATATTTTATATTATATAT chr4 + 94230402 26320249 26320248 26320338 26320249 26320248 26320338 90 ATTTATCTCACATGT---ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATAT ..x...:.:.:..:.---....x:..:.....x......:......:.x.x...x....x.:...:xx...x.....x...x:....:..... 15M3D75M 66/90 73.3% 90/94230402 0.0% 3/90 3.3% -13653637 -80576765 +3812 chr4 + 190214555 12666829 12666828 12666914 86 TTTATATAATATATATATTTTATATATAATATATATTTTATATAATATATATTTTATAT-----ATAATATATTTTATATATAATATATAT chr4 + 94230402 26320250 26320249 26320340 26320250 26320249 26320340 91 TTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGT .....x.x.:..:.....x:..:....x.......:.x....:.......x.x....:.-----...:........xx:...x:.....:. 59M5I27M 65/86 75.6% 91/94230402 0.0% 5/86 5.8% -13653421 -80576981 +4175 chr4 + 190214555 12666886 12666885 12667076 191 ATATAATATATTTTATATATAATATATATTTTATATAATATATATTTTATATAATATATATTTTATATATAATATATATTTTATATAATATATATTATA-------TATAATATATATTTTATATAATATATATATTTTATATAATATAT-ATGTTATA----TATAATATATATATTATATAATAT-----------ATATATTTTATATATT chr4 + 94230402 73633764 73633763 73633970 73633764 73633763 73633970 207 ATATCACATTGTAGAGATATAAGACA-ACATCAAATATTAAAC-TTTTAAAT----TGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaat-tattaaatattatttCACGTTATAATGTTATGATATACATGGTAATTAACATTTGACTTAGAAATATTTTTTCTCTATT ....x.:..xx.xx.x......x.:.-.:x.:.x...x..x.:-.....x..----.:..:........xx..x..:..x.....:.............-------.....x:...x.x..x.......:.x..-.x...x...x...x.-.:......----...:.....:..:x..xx...:..-----------....x....x.x.... 26M1D16M1D8M4D43M7I28M1D15M1I8M4I24M11I16M 137/184 74.5% 207/94230402 0.0% 30/184 16.3% -60966878 -33263524 +4069 chr4 + 190214555 12666932 12666931 12667084 153 TTATATAATATA-TATTTTATATATAATATATATTTTATATAATATATATT---------ATATATAATA---TATATTTTATATAATATATATATTTTATATAATATATATGTTATATATAATATATATATTATA----TAATATATATATTTTATATATTACATATAT chr4 + 94230402 26320176 26320175 26320340 26320176 26320175 26320340 165 TTCTGTAATGTAGTGTGTCATTAATAAAATATTTTCTT----ATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA-GTATATTTTTAGTATTGTATATGT ..x.:....:..-.:.x.:..xx....x....x..:.x----....:....---------....x....x---.xx.x.....x.x.:..:.....x:..:...x.......::......:.......x......:----.....-:........xx:....::....:. 12M1I25M4D9M9I10M3I63M4I5M1D24M 110/148 74.3% 165/94230402 0.0% 22/148 14.9% -13653244 -80577158 +4218 chr4 + 190214555 12666984 12666983 12667151 168 ATATAATATATATTTTATATAATATATATATTTTATATA-ATATATATGTT-ATATATAATATATATA---TTATATAATATATATATTTTATATATTACATATATTTTATATAATATATATTATATATATTTTATATAATATATATATTTTTATAATATATATTATATATAT chr4 + 94230402 26320183 26320182 26320340 26320183 26320182 26320340 158 ATGTAGTGTGTCATTAATAAAATATTT---TCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA------GTATATTTTTA------GTATTGTATATGT ..:..:.:.:.xx..x...x.....x.---.:......:-..x:.x.....-....x....xx::x..---....x.x.:..:.....x:..:......:.....:.x....:.......x.xx...:...:.x...------:..........------:....:.....:. 27M3D9M1I11M1I16M3I66M6D11M6D13M 112/153 73.2% 158/94230402 0.0% 20/153 13.1% -13653199 -80577203 +4579 chr4 + 190214555 12667062 12667061 12667221 160 TATATTTTATATATTACATATATTTTATATAATATATATTATATATATTTTATATAATATATATATTTTTATAATATATATTA-TATATATTTT------GTATAATATATATTATATATATTTTACATAAAATATATATATTTTACATA-ATATATATTTTATATAT chr4 + 94230402 73633814 73633813 73633969 73633814 73633813 73633969 156 TGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTG---ttttataatacaaattattaaatattatttCACGTTATAATGT-TATGATATACATGGTAATTA--------ACATTTGACTTAGAAATATTTTTTCTCTAT .:..:........x:.:x..:..x.....:................:..:....x.:...x.:---..........:.x....-..x.....x.------x......:.-...x.....:..xx..xx..--------.:....x..x..-.x....x....x.x... 63M3D17M1I10M6I9M1D20M8D12M1I17M 114/148 77.0% 156/94230402 0.0% 20/148 13.5% -60966752 -33263650 +3547 chr4 + 190214555 12667065 12667064 12667164 100 ATTTTATATATTACATATATTTTATATAATATATATTATATATATTTTATATAATATATATATTTTTATAATATATA------------TTATATATATTTTGTATAATATA chr4 + 94230402 45374162 45374161 45374273 45374162 45374161 45374273 112 ATCTGATATTATACAGCTGTTATGTGTTGCATATGTTATGTATATTCTATATAACATATAGGTTTATGTAGTGTATAGAGTGATTTTCTTTATATAAATCTCTCTTCATATA ..:.x....xx....xx.:..x.:.:.x::....:....:......:.......:.....x:...x.:..:.:....------------.......x..:.:x:x.x..... 77M12I23M 70/100 70.0% 112/94230402 0.0% 12/100 12.0% -32707097 -61523305 +3206 chr4 + 190214555 12687130 12687129 12687189 60 GTGTGCCTGTGATTCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCGGGA chr4 + 94230402 76033204 76033203 76033263 76033204 76033203 76033263 60 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...::.x...::.............::........x.xx.x...x::.........:.:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -63346074 -30884328 +3355 chr4 + 190214555 12698506 12698505 12698574 69 CAGGAAAGTTCTCTTTACTTATATCTTAATTGTTATTCTCACCCTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 6553988 6553987 6554056 6553988 6553987 6554056 69 CAGGAAAATGCCATTGTATCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT .......:.x.:x..xxx.:.x.x.xx.x...........x.:....:...:................. 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 6144518 NA +3071 chr4 + 190214555 12698549 12698548 12698590 42 CTCTTTCTTTCTTTTTTTTTTTTTTTTTAATTTTTTTTGAGA chr4 + 94230402 46054502 46054501 46054543 46054502 46054501 46054543 42 CTCTTTCTTTCCTTTTTTTTTTTTTCTTAATTTTTTCACAGA ...........:.............:..........:xx... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -33355953 -60874449 +3073 chr4 + 190214555 12712497 12712496 12712562 66 GTGGCACAAGCCTGTAGTCTCAGCTAGTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..x.--......::......x...::........x.xx.x...x.x...........:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% -63320704 -30909698 +3816 chr4 + 190214555 12714017 12714016 12714195 179 ATATGATATCATATATTTACATAATA-TATATGATATTATA----TATATTATATAATATATATGATATATATATTATATAATATATATGATATATATATTATATAATATATATGATATATATATTATATAATATATATGATATATAATAAATAT--ATTCATATTATATATAATATAATAAATAT chr4 + 94230402 73633764 73633763 73633931 73633764 73633763 73633931 168 ATATCACATTGTAGAGATATAAGACAACATCAAATATTAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATAT--TATATATGTTCTATAAAGTATCTG---------ttttataatacaaattat------taaatattatttCACGTTATA-ATGTTATGATATACAT ....x.:..::..x.xx..:.x:.:.-:..xx:......x.----..x...:..:xx......xx..x..:........:.........--.......:..x.....x:...x..---------..x.......:.x..x..------.......--x....::.....-..:x...:...x.:.. 26M1I14M4I44M2D24M9D18M6D7M2I12M1D16M 118/161 73.3% 168/94230402 0.0% 25/161 15.5% -60919747 -33310655 +3084 chr4 + 190214555 12737105 12737104 12737171 67 TGCCCCTGTAGTTCTAGCTACTTGGGAGGCTGAGGTGAAAGGATCACTTGAGCCCAGGGAAGTTGAG chr4 + 94230402 76033205 76033204 76033271 76033205 76033204 76033271 67 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG ...x.x........:.........::........x:xx:x.:.x.......:.....:::xx...:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -63296100 -30934302 +3105 chr4 + 190214555 12754710 12754709 12754767 58 TTTTCTTTTCCTTTGTTTTTTTTGTTTGTTTGTTTTGTTTTTGAGATGGAGAATGGAG chr4 + 94230402 33814298 33814297 33814355 33814298 33814297 33814355 58 TTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGGAACAGGGAGGTAGGG ....:....::.xx...........................x..:xx..::::.:.:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -21059588 -73170814 +3652 chr4 + 190214555 12757482 12757481 12757568 87 TGTGTGTGTGTGTGTGTGTGTGTATTTATTTATATAAGCATCTATATAACCCTGTGGGTATACATATATGCACACACACATACACAG chr4 + 94230402 85834541 85834540 85834617 85834541 85834540 85834617 77 TGTGTCTGTGTGTGTGTGTGTG----TATTAATGTAGGCATACATA------TGTAAATACATGTTTATGCACACATACACACATGG .....x................----....x..:..:....x:...------...:::..:.::.x..........:...:...::. 22M4D20M6D35M 60/77 77.9% 77/94230402 0.0% 10/77 13.0% -73077059 -21153343 +3245 chr4 + 190214555 12757505 12757504 12757608 104 ATTTATTTATATAAGCATCTATATAACCCTGTGGGTATACATATATGCACACACACATACACAGATATATATACACATATAAATATATATATGTAGGCATGTGT chr4 + 94230402 21109187 21109186 21109284 21109187 21109186 21109284 98 ATTTGCTTATACA------TGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGT ....::.....:.------.:.:.:x.:.......::..:x......:..x....:....x.:x:..:x.....::..:..xx:..::x.x...:x::...... 13M6D85M 63/98 64.3% 98/94230402 0.0% 6/98 6.1% -8351682 -85878720 +3088 chr4 + 190214555 12783520 12783519 12783568 49 TTCTGGTCCCACCTCTTTCCCAAACGTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42075886 42075885 42075934 42075886 42075885 42075934 49 TTCTGGTCCTATCTATTCCCCAAAGTTGCCTTTTTTTTTTTTTTTTTTT .........:.:..x..:......xx.x::................... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -29292366 -64938036 +3166 chr4 + 190214555 12817050 12817049 12817132 83 CATGGTGGCTGGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAAGAGAATTGCTTGGACCTGGGAGATGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........x.::........x.xx.x...x::....:...::.:..x.xx:..:..::. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -63216147 -31014255 +3302 chr4 + 190214555 12834539 12834538 12834631 93 CCACTTTCACT--TAATAAATAGCAGATATGCTTTCTCTTTCTCATGATTTTCTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTT chr4 + 94230402 63648296 63648295 63648388 63648296 63648295 63648388 93 CCACTACCACCACCAAAAAATAGCC--TGTGCTTCCTTTTTCTTACAGCTGTATTGTTTTTTTTTTGTTTGTTTTTTTGGTTTTTTTTTATGCTT .....x:...:--:..x.......x--.:.....:..:.....:.::::.x.x..x...:.x....x...x.......xx.........x.x... 11M2I12M2D68M 66/91 72.5% 93/94230402 0.0% 4/91 4.4% -50813757 -43416645 +3026 chr4 + 190214555 12834576 12834575 12834632 57 TTCTCATGATTTTCTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTG chr4 + 94230402 2383789 2383788 2383845 2383789 2383788 2383845 57 TTTACTTGACTGTCTTGTTCCTTCTTCTTTTGTTTTTTTTTTTTTTCCTTTCCCTTG ..:x.x...:.x....x..:..x:..:....x..............::...:..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 10450787 NA +3272 chr4 + 190214555 12834584 12834583 12834641 58 ATTTTCTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTGAGACAGAAT chr4 + 94230402 80507640 80507639 80507697 80507640 80507639 80507697 58 ACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTTCCCCCAAACTGAAT .:..:..:...x..:..::..............x.:..........::x.:..x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -67673056 -26557346 +3039 chr4 + 190214555 12857727 12857726 12857796 70 CGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x::.--......:...........::........x.:x.x...xx:.x.......:.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -63175470 -31054932 +3016 chr4 + 190214555 12867600 12867599 12867681 82 CATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATATACACGTATACATACATACATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ...::....x:x.x......:::.x.x...:..::.:.:.....x.xx...x.:.:......::.:.:....:.x...x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -63509257 -30721145 +3016 chr4 + 190214555 12873211 12873210 12873271 61 ACAACCCAAAGTACTCAAATATATGTGTGTGTGTGTGTGTGTATATATACACACACACACA chr4 + 94230402 83331388 83331387 83331448 83331388 83331387 83331448 61 ACAACCAGAAGCACTCTTTAATCATTATGTGTGTATATGTGTATATATATATACACACATA ......x:...:....xxxx..xxx.:.......:.:............:.:.......:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -70458177 -23772225 +3453 chr4 + 190214555 12873222 12873221 12873300 79 TACTCAAATATATGTGTGTGTGTGTGTGTGT----ATATATACACACACACACACATATATGTGTATATATATATATACATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:...xx.:.:.x.................----..:..x:..:...:.:::.x...:....x...::.:.:...:...:.. 31M4I48M 56/79 70.9% 83/94230402 0.0% 4/79 5.1% -72961311 -21269091 +3274 chr4 + 190214555 12873229 12873228 12873303 75 ATATATGTGTGTGTGTGTGTGTGTAT----ATATACACACACACACACATATATGTGTATATATATATATACATATATG chr4 + 94230402 85834538 85834537 85834616 85834538 85834537 85834616 79 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x.:...x...............:.----..:..x:..:...:.:::.x...::...x...::.:.:.....:.:... 26M4I49M 53/75 70.7% 79/94230402 0.0% 4/75 5.3% -72961309 -21269093 +4130 chr4 + 190214555 12873229 12873228 12873322 94 ATATATGTGTGTGTGTGTGTGTGTATATATACACACACACACACATATATGTGTATATATATATATACATATATGTGTGTGTATATATATATGA chr4 + 94230402 21109195 21109194 21109288 21109195 21109194 21109288 94 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGA ...:........x.x....x.:....x....:::..x....:.:.:x::...::x....::...:...x:..::x.x.........:.:..... 94M 64/94 68.1% 94/94230402 0.0% 0/94 0.0% -8235966 -85994436 +3242 chr4 + 190214555 12873231 12873230 12873309 79 ATATGTGTGTGTGTGTGTGTGTATATATACACACACACACACATATATGTGTATATATATATATACATATATGTGTGTG chr4 + 94230402 85834538 85834537 85834616 85834538 85834537 85834616 79 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x.....x.............:.:...xx.:::.x:..:......:.:x:..:..:.x...::...:...::::::.. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -72961307 -21269095 +3161 chr4 + 190214555 12899628 12899627 12899730 103 TATGTGTGTGTGTATGTGTGTGTGTGTGTGTATATATGTGTGTATGTGCGTGTGTGTATAGGTATATATATGTGTATATGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATG--------------------TAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x...................xx...--------------------....:...:......:x...::...x.:..::::::..:.:.:.. 38M20D45M 59/83 71.1% 83/94230402 0.0% 20/83 24.1% -72934905 -21295497 +3291 chr4 + 190214555 12939004 12939003 12939090 87 TTTTATGTAAATTATACATACATATATATACATACACACACACATATGTATATACAAAATTTTTCTTATTTTTATACTACTAGTTCT chr4 + 94230402 67195524 67195523 67195610 67195524 67195523 67195610 87 TTTTGTAGAAGGAAAAGAAAGGTATATACACACACACACACACATATATATATAATAAATTCTCAGGACGTTTATACTTTAATTTCT ....:.:x..:xx.x.x.x.x:......:...:..............:......xx.....:.:xxx.:x........x:x.x.... 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% -54256520 -39973882 +3780 chr4 + 190214555 12944785 12944784 12944868 84 ATATGGTGGCATGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAGTTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::....--.....x....:.:.........::::........x.xx.x...x.........:...:..:.xx:..:..:.. 9M2D73M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -63088411 -31141991 +10949 chr4 + 190214555 12964050 12964049 12964480 431 TTTAAGTTCCAAAGGGCTCAACAGAAGTCAATATTTGTAAATATTAACCTTGTGAGCAAGCAAGGTTTGAATCTCTTGCTGCACCATTTTTGAGTAGTCCAATCTGATAAGAAGAATTCAAATTGGATTGTGATCTGT-TTAAATGAAACTCTCCA------------TTTATATCAAATGTGCTCTTTAGTCAGAATAGGAGAGAGGGTAATAAAAAAAGAGTACAGTTCCGCTGAAAGAGGCCTTGACTCTTTATCATCCATCAGGCAAGGTGAAAAGCTCACTGAAAACTCCAGTG-AGATTACATTTAACATAAACTTCCTGAGCTGAATTCCATTATTGCTAAAATAACTAGAAGGGAATCATTTAAATATTTTCCTG-ATGCCAGTATGGGGTCTTATTCAG-CTTCTGACTAACAGCATTTTGAGAACAGTTCATCCTCC chr4 + 94230402 80603311 80603310 80603722 80603311 80603310 80603722 412 TTTAAGTTCCAAGAGCCTGAACCAAAGTCAGTATTAGTAAATAAAAGCTCTGTA------------------TTTTTTCAGC--------TGAAAAATGTGACCTGATAACATAGGATCCAACTGAACTGGGATCAGTGTTAGATGAAACCACGCAATATGTAGGAATTTTATATGAAATAAGCT-----GTCTGAGTATAGCTTGCGGATATACACACAAGGCTCAATTCATCTGTG-GAGGACTTTATTCTT-ATCATCCATCAGCCAAAATGAAGTTCTCACT-ACAACTCCACTGCAGATTGCACTTAACATAAACTTCCTGAGCTGAATACCATTATTTCTAAAATAACTTGAA-AAAATCATTTGCATATTTCCCAGAATGTCACTTTGGGCCACTGGTCAGACTTCTAACAAGTATAAACTGGACAGCTATTTCTGCTCC ............::.x..x...x:......:....x.......xx.:.::...:------------------:.:..x.x..--------...:x.:.x::.:.......x.x:::x..x..:..:.:..x....x..-...:.......:x:x..------------.......x....:x...-----...x..:..x::xxx:x..xx...x.x.x.::.:x..:...xx...x:-....x...x.:....-............x...::....:xx......-.x.......x..-.....:..:.........................x........x...........x...-::........:x......:..x.-...:..x.x....x:x:.:x....-.....:..x.::.xx.x:.x..x.:.x:..:x.x.... 54M18D10M8D48M1I17M12I17M5D48M1D15M1D31M1D12M1I59M1D23M1I24M1I38M 280/396 70.7% 412/94230402 0.0% 51/396 12.9% -67639261 -26591141 +3234 chr4 + 190214555 12971901 12971900 12972012 112 AATACTATGTCTTCTAAGGTTTCACC--ACTGAACTTAATTTGCCTCTGAGATTTGAATTATTTTTTTCTTCTTTTCTTTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 68431665 68431664 68431771 68431665 68431664 68431771 107 AACACCATGTCGTC----ATTTCCTCTGAGTGAGCTCAGTCATTCTTTAA---TCAACTTCATGCTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTTTCCAA ..:..:.....x..----:....x:.--.x...:..:.:.:xx:..:.:.---.::.x..xx.x:.....:..::.:...x..x....:..:..................::.. 14M4D8M2I22M3D61M 72/105 68.6% 107/94230402 0.0% 9/105 8.6% -55459764 -38770638 +3179 chr4 + 190214555 12971951 12971950 12972013 63 TTTGAATTATTTTTTTCTTCTTTTCTTTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTAAT chr4 + 94230402 17524790 17524789 17524852 17524790 17524789 17524852 63 TTTAAAATATTTCATTTTTCTTTTCTCTCTCCTCCCTTGTTTTTGTTTTGTTTGCTTTTTAAT ...:..x.....:x..:.........:.:.:..:.:.:x.:...x....x...x:........ 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -4552839 -89677563 +3751 chr4 + 190214555 12980523 12980522 12980605 83 CATGTGTGTATATATATATATATATATATATATATATACACACACACACACATA---TATATAGATATATATACACATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ...........::.:.:.:..x...:x.:....:..:.....:.........:.---x.x.x..x..:..:x.:.x.......... 54M3I29M 61/83 73.5% 86/94230402 0.0% 3/83 3.6% -10267198 -83963204 +3175 chr4 + 190214555 12980549 12980548 12980597 49 TATATATATATACACACACACACACATATATATAGATATATATACACAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x.................:.:x....:x.........::.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -76843383 -17387019 +3248 chr4 + 190214555 12989415 12989414 12989489 75 TGTTTTTTGGTGTTTTTTTGTTTTTTTTTTTTTTTGAGACAGGGTTTCGCTCTTGTCACCTA-GGCTGGAGTGCAA chr4 + 94230402 34616549 34616548 34616624 34616549 34616548 34616624 76 TGTTTTTTGGGGTTTTTTTGGTTTTTTTTTTTTTAGAAAAAGTTGTTCAGTCCTGTGGCCAACAACTGCAGTATAA ..........x.........x.............x..:.x..xxx...:x..:...x:..x.-::...x...::.. 62M1I13M 56/75 74.7% 76/94230402 0.0% 1/75 1.3% -21627134 -72603268 +3574 chr4 + 190214555 12991805 12991804 12991887 83 CATGGTGGCGGGCGCCTGTAGTCCCAGCTACCTGAGAGGCTGAGGCACAAGAATTGCTTGAACCTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x:..--......:........:...:........x.x::x...x::........::.:..x.xx:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -63041392 -31189010 +3128 chr4 + 190214555 13062125 13062124 13062209 85 ATACATACATACTTGTGTATACATACACACCCGTATGTATACATACATACTTGTGTATACATACACACCCGTATGTATACATACA chr4 + 94230402 76376858 76376857 76376934 76376858 76376857 76376934 77 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATA--------TGTGCATATAAACA ..:.....x.x:..:::...:..x.x.:..x:.....:.....x.xx................--------.:..:...:.x... 63M8D14M 56/77 72.7% 77/94230402 0.0% 8/77 10.4% -63314733 -30915669 +3056 chr4 + 190214555 13062163 13062162 13062225 63 ATACATACATACTTGTGTATACATACACACCCGTATGTATACATACATACTTGTGTATACATA chr4 + 94230402 76376858 76376857 76376920 76376858 76376857 76376920 63 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATA ..:.....x.x:..:::...:..x.x.:..x:.....:.....x.xx................ 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -63314695 -30915707 +3298 chr4 + 190214555 13073236 13073235 13073318 83 CATGGCGGCACGTGTCTGTACTGCCAGCTATTCTAAAGGCCGAGGCAGGAGAATCACTTGAACCCAGAAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:..::.::..--...x.x.......:.:x......:...x.xx.x...x................x.xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -62959961 -31270441 +3117 chr4 + 190214555 13106271 13106270 13106328 58 CCAACTCAAACAAACAAACAA----ACAACAGCAGCAAAAAAAAAAAAAAAAAATGAGCCCA chr4 + 94230402 5941506 5941505 5941567 5941506 5941505 5941567 62 CCAAGTTAAAACAACACAGAATACAACAACAGCAACAAAAAAAAAAAAAAAAAACATGCCCA ....x.:...xx....x.x..----.........:...................::x..... 21M4I37M 48/58 82.8% 62/94230402 0.0% 4/58 6.9% 7164765 NA +3045 chr4 + 190214555 13156863 13156862 13156910 48 TATACACATATACATATACATATATGTACATATACATATACATATATA chr4 + 94230402 30233012 30233011 30233059 30233012 30233011 30233059 48 TATGCACATATACATATACATGTGTGCGCATGTACACAGACATGTTTA ...:.................:.:..::...:....:.x....:.x.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -17076149 -77154253 +3301 chr4 + 190214555 13156905 13156904 13156976 72 TATATACATATACATATATACATATACGTATGTGTGCATATACATATATACATATACGTATATGTGCATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x.:.:.......x::x....:xx:.:.....:...::...:......:....:x...:.x...:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -28592191 -65638211 +3039 chr4 + 190214555 13165508 13165507 13165575 68 CTAGGGGAAAAAGAAAGGAGAGGAGGAAAGGAGGAAGGGCGGGAAGAAGTGAAGGAGGGAGGGGAGGA chr4 + 94230402 73744715 73744714 73744782 73744715 73744714 73744782 68 CTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGA ...::.............::.:.:......::::.....x:::.:.::.x.::x.:..x.....x... 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% -60579207 -33651195 +3114 chr4 + 190214555 13183997 13183996 13184074 78 ATAAATTTCTTTATATGTATACACACACACATACAC--ATGCACACACACACACACACACACACACACACACACACACTC chr4 + 94230402 7596596 7596595 7596675 7596596 7596595 7596675 80 ATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTC ....x...x......:x....x..........:...--..x..:.:.:...:.x.....x.x..x:x..x::...:.:.. 36M2I42M 56/78 71.8% 80/94230402 0.0% 2/78 2.6% 5587401 NA +3180 chr4 + 190214555 13199644 13199643 13199702 59 GCATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:x......:...........::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -62833562 -31396840 +3093 chr4 + 190214555 13227294 13227293 13227394 101 TGCAGACAGCCTATTGTGGGAACTTATGATCGTCTAAGTTAATTACA----------TATATATATATATATATATATACACACACACACACACACATATATATATATATA chr4 + 94230402 61270728 61270727 61270835 61270728 61270727 61270835 108 TGCAGCCAGAGAAATGTGGG---TTGCAAGAGCTTAAGGCGATAACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .....x...xxx.x......---..:::.xx.::....x::..x...----------...x.:.......:......::...::.....x....x...:....x:..:.:. 20M3D24M10I54M 68/98 69.4% 108/94230402 0.0% 13/98 13.3% -48043434 -46186968 +3083 chr4 + 190214555 13227349 13227348 13227397 49 TATATATATATATACACACACACACACACACATATATATATATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x...:................x:...xx........::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -76596583 -17633819 +3167 chr4 + 190214555 13227350 13227349 13227418 69 ATATATATATATACACACACACACACACACATATATATATATATATATATATATATATATCTCCTATTG chr4 + 94230402 91043344 91043343 91043412 91043344 91043343 91043412 69 ATGCATGTAGTGACACACACACACACACACATATATATTTAAGCTTAATTAAATATGGATTTTCCATTG ..::..:..xxx..........................x..x::x..xx..x....:x..:.:.:.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -77815994 -16414408 +3407 chr4 + 190214555 13227351 13227350 13227427 77 TATATATATATACACACACACACACACACATATATATATATATATATATATATATATATCTCCTATTGGTTCAGTCC chr4 + 94230402 89823932 89823931 89824008 89823932 89823931 89824008 77 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCC .......:x....................x....xx........::...x:xx.xx...x.x..x:.:x:...:... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% -76596581 -17633821 +4753 chr4 + 190214555 13232842 13232841 13233054 213 GAGAAAGGTAGGGAGGGAGGG--AAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGA chr4 + 94230402 65771126 65771125 65771340 65771126 65771125 65771340 215 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ..:.....:..:.:::x....--..x.....x.....x.xx.:.x.:..xx:.x.:...:x.xxxx..:.::xx::.:.::..:.:....x:.....:.....::x.x...:.xx::.:.......::.xx::.:x:..:.x...x:xx.::.......:..::.:x...x.....:x.x......x..x..x:..:xx.:x..::...:..x.. 21M2I192M 123/213 57.7% 215/94230402 0.0% 2/213 0.9% -52538284 -41692118 +3047 chr4 + 190214555 13232843 13232842 13232891 49 AGAAAGGTAGGGAGGGAGGGAAGAAAGAAAGAAAAAGGAAGGAAGGAAG chr4 + 94230402 44840876 44840875 44840924 44840876 44840875 44840924 49 AGAAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAAAAAAAG .....:.x:...:...:......:..:...:.........::..::... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% -31608033 -62622369 +3746 chr4 + 190214555 13232898 13232897 13233044 147 AGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGAAGAA---------AGAAAGAAAGAAAGAAAGAAAGAAG chr4 + 94230402 49044664 49044663 49044821 49044664 49044663 49044821 158 AGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG ..:..:...x:.::..xx:::..x:.xx.......x.::x..x:....:x.--...x:......::.::.:xx..::..::.......:x::....x.:...:..:...:...x....x.::..---------..:....::....:x:..x..x... 51M2I71M9I25M 90/147 61.2% 158/94230402 0.0% 11/147 7.5% -35811766 -58418636 +3047 chr4 + 190214555 13232906 13232905 13232980 75 AGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA .....:.:..:...x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -27879272 -66351130 +3115 chr4 + 190214555 13232910 13232909 13232991 82 AGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .....:.:..:...x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:::x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -27879268 -66351134 +3209 chr4 + 190214555 13232914 13232913 13232991 78 AGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA .....:.:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -27879264 -66351138 +3209 chr4 + 190214555 13232918 13232917 13232995 78 AGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA .....:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..::.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -27879260 -66351142 +3209 chr4 + 190214555 13232922 13232921 13232999 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x..:.:.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -27879256 -66351146 +3170 chr4 + 190214555 13232924 13232923 13233025 102 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAG chr4 + 94230402 10269792 10269791 10269892 10269792 10269791 10269892 101 AAACAGAAAAACAGTGAAAGAA-GAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAG ...x.:.:...x.:x.......-...:::..x.......x...:::xx..::....x.x...::.x.......:..:x:xx..:.:..::...x...x:... 22M1D79M 65/101 64.4% 101/94230402 0.0% 1/101 1.0% 2963132 NA +3096 chr4 + 190214555 13247217 13247216 13247286 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -62785980 -31444422 +4060 chr4 + 190214555 13247552 13247551 13247730 179 TTTTTCTCTCTCCTCCCCTTTCCTCTCCTCTACTCCCCTTTTTCTGCTGACACTTCTCATCCTTTTTCCTTTCTTTCTTTTTCTTTCTTTCTTCTTTTCCTTCTTCTCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTTTCTT chr4 + 94230402 50176269 50176268 50176426 50176269 50176268 50176426 158 TCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTG---------------------TTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .:.x....x..x...:......:..:::.x.x.x...x:....x:::..---------------------........x..::..x:x...x.:...x:......::::..:..xx.x::.x:..::::x....:.:x...:........::....::.::x......x:x.x.::... 49M21D109M 96/158 60.8% 158/94230402 0.0% 21/158 13.3% -36928717 -57301685 +3511 chr4 + 190214555 13247555 13247554 13247695 141 TTCTCTCTCCTCCCCTTTCCTCTCCTCTACTCCCCTTTTTCTGCTGACACTTCTCATCCTTTTTCCTTTCTTTCTTTTTCTTTCTTTCTTCTTTTCCTTCTTCTCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCT chr4 + 94230402 38895885 38895884 38896013 38895885 38895884 38896013 129 TTGTGTCTCAACCCTTTGCATCACCTCTCTTTTCCCT----------CATGCCCCATTTTTTTT--TTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTTCT ..x.x....xx...:..x.x..x.....x:.::..:.----------..:x:.:...::.....--..:......x.x....:...:....:..x:x.x:.x..:....::.:x:....xx..x:..:..x.:.x...... 37M10D17M2D75M 84/129 65.1% 129/94230402 0.0% 12/129 9.3% -25648330 -68582072 +4234 chr4 + 190214555 13247622 13247621 13247788 167 TTCTTTCTTTTTCTTTCTTTCTTCT---TTTCCTTCTTCTCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTCTTCTTCTT----CTCCCTCTTCTCCATCTTCTTTCTCCTTCTACTTCTCATTCTTCT chr4 + 94230402 72471345 72471344 72471512 72471345 72471344 72471512 168 TTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATT-TACATACTTATCATTAAAATCCCCTCTCTTCC-----CTTGCTCCCTCCCTTTCTGACTCCTTT ..:.....:..x.xxx:........---....:.x:..x..:.......x......:.:...:....:.:xx..x.x.......x.:x..x:x.x..:..x.x...x..-.x.x.x...x.:x..----::......::...-----...x....:..:x:....x.:..:.:. 25M3I81M1D15M4I13M5D27M 109/161 67.7% 168/94230402 0.0% 13/161 8.1% -59223723 -35006679 +4365 chr4 + 190214555 13247630 13247629 13247761 132 TTTTCTTTCTTTCTTCTTTTCCTTCTTC-----TCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTT-----------CTTCTTTTTCTTCTTTCTTCTTCTTCTCCCTCTTCTCCATCTT chr4 + 94230402 50176266 50176265 50176413 50176266 50176265 50176413 148 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCT ......x...:x..x..:.:.:......-----...x..:x..x..x.x.:x..:.:.:.x.....:x.x...x....:x....:......::.-----------..:.::x..:.::.x...:......:..::...:......::. 28M5I61M11I43M 89/132 67.4% 148/94230402 0.0% 16/132 12.1% -36928636 -57301766 +3275 chr4 + 190214555 13247636 13247635 13247742 107 TTCTTTCTTCTTTTCCTTCTTCTCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTCTTCTTCT chr4 + 94230402 48874866 48874865 48874970 48874866 48874865 48874970 105 TTCTCTCTTCTTCACATA--TCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCT ....:.......:x.x.x--....:.::.x:x:x.::..x....:.....x...:..x...x.:......:x.:.x.:x::.:.....:..x:..::..:x...... 18M2D87M 67/105 63.8% 105/94230402 0.0% 2/105 1.9% -35627230 -58603172 +3006 chr4 + 190214555 13247668 13247667 13247726 59 GTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTT chr4 + 94230402 86518996 86518995 86519054 86518996 86518995 86519054 59 GTTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ........::.::..:.:..x..::xx..:...:.:..:.........:....x..... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -73271328 -20959074 +3649 chr4 + 190214555 13247679 13247678 13247823 145 TTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTCTTCTTCTTCTCCC---------TCTTCTCCATC--TTCTTTCTCCTTCTACTTCTCATTCTTCTTCTTCTTCTCCTCCTCCTCCTCCCTCTCCTCCTCC chr4 + 94230402 93283194 93283193 93283344 93283194 93283193 93283344 151 TTTTCATCACATCTCCATCCATCGTCCCTTTTTCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTCT-----CCATCCATCCTCTCCCCCTCCACTTGCATTGCCCTTTCTCCCACC ..:.:x.:x.x...:.x..:x.:x:::......:.....:.:....:.:.::xxxx.x..x.........---------...........--.:x.:..:......-----:...:.x..:...:.::....x.:.x.x::x....:..::..x.. 70M9I11M2I14M5D45M 90/140 64.3% 151/94230402 0.0% 16/140 11.4% -80035515 -14194887 +3085 chr4 + 190214555 13247718 13247717 13247776 59 TCTTCTTTTTCTTCTTTCTTCTTCTTCTCCCTCTTCTCCATCTTCTTTCTCCTTCTACT chr4 + 94230402 74430681 74430680 74430739 74430681 74430680 74430739 59 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCCAATT ..:.:.....:...:..:......::.....:....:.::...::....:::.:.x.:. 59M 40/59 67.8% 59/94230402 0.0% 0/59 0.0% -61182963 -33047439 +3137 chr4 + 190214555 13307110 13307109 13307174 65 AAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAAAATCAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:.:..xx.x:.......:::...::...:.:...:...:.:.............x:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -15707563 -78522839 +3052 chr4 + 190214555 13307114 13307113 13307193 80 AAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAAAATCAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 32089555 32089554 32089634 32089555 32089554 32089634 80 AAAGCTGGGGTGGGAAGGGGGGGTGAAGAGAGAGAAAAAAAGAAGGGAAAAAAAGATTTAAAAAAATACCAAGAAAACAA ....xx:..:x..:.:.::..::x....:..:.....:......:.:..:....:..:x..:...:x.xx..::...x.. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% -18782441 -75447961 +3239 chr4 + 190214555 13307135 13307134 13307198 64 AAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAAAATCAAAGAAAGAAAGAA-AGAAAGAAAGAAA chr4 + 94230402 21814711 21814710 21814775 21814711 21814710 21814775 65 AAGGGAGGGAAAGAAAGAAAAACATAAAAGAATAGCCAGAGAAATATAGAGCAAAAAGAGAGAAA ....:...............:.x.x...::..x.::..:.....x.x...:-.:.....:..... 51M1I13M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% -8507576 -85722826 +3216 chr4 + 190214555 13307150 13307149 13307250 101 AGAAAGAAAGAAAGAAAAAATCAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA------TGAGCGAAAGACAGAAAGA chr4 + 94230402 41112178 41112177 41112284 41112178 41112177 41112284 107 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATATTCCTGACCCAAAGGCACACAGA ..:..:::......x..x..x....x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:::x...------...x.x....:..x.x... 82M6I19M 68/101 67.3% 107/94230402 0.0% 6/101 5.9% -27805028 -66425374 +4066 chr4 + 190214555 13307195 13307194 13307396 202 GAAAGAAAGAAA---GAAAGAAAGAAAGAAAGAAAGAAAATGAGCGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAAGAAGGAAAGAAGGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 59372550 59372549 59372754 59372550 59372549 59372754 205 GGGAGAAAGTAATGCGAGGGGAAGTAATAG-GAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA .::......x..---..::.:...x..x.:-...:.....xx.x......xx.x:..x..x:....:..:..x:.x::x.:x..x..:..::.x:...::.....:..::..x:.x::....:.::.x:.x..x...::::x:.:x:.x.:.......:x..x..-..:......x..x:..:.:x.:.xxx..x:.:..:..:.. 12M3I15M1D134M1I40M 118/201 58.7% 205/94230402 0.0% 5/201 2.5% -46065355 -48165047 +4896 chr4 + 190214555 13307268 13307267 13307397 130 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAAGAAGGAAA---GAAGGAAAGAAAGAAAGAAA---GAAAGAAAGAAAGAAAGAAA---GAAAGAAAGAAAGAAA chr4 + 94230402 1500702 1500701 1500840 1500702 1500701 1500840 139 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaa .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:.::..x..::..x:.---..:..:..x....:...:..---.:..:...:...........---....x.:.::.:.... 74M3I20M3I20M3I16M 88/130 67.7% 139/94230402 0.0% 9/130 6.9% 11806566 NA +3274 chr4 + 190214555 13325355 13325354 13325480 126 TGTCTGTGCTCACTTTCTTCATCTGTAAAATAGAGATGATAATAATATTTTTCCAGTTG-------CCTTGTTATAAGCATTAAAGTTATTCATATATATATATATAAATATATATATATATATATATATATA chr4 + 94230402 63788458 63788457 63788589 63788458 63788457 63788589 132 TGACTATGTTTGTTTCCTTGAAGTTTGCGGTTGCAGTGaaatttatattttaataatttatattatCCCTCATATATAC-TTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATA ..x..:..:.:::..:...x.xx.x.:x::.x.x::...x.x.x.......xx:.:..x-------..:.xx....x:.-...:.:...x.....:.......:.....:.x.....:x.:.:.:........ 59M7I13M1D53M 81/125 64.8% 132/94230402 0.0% 8/125 6.4% -50463103 -43767299 +3000 chr4 + 190214555 13373929 13373928 13373992 64 GTGTGTGTATATATATGTATGTATGTATGTATGTGTGTGTGTGTATATATGTGTGTGTGTATAT chr4 + 94230402 86633927 86633926 86633990 86633927 86633926 86633990 64 GCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .:...:..:::..x:.:.....x.....::...:......:.:..:..x...:..::.x.:... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -73259998 -20970404 +3307 chr4 + 190214555 13404242 13404241 13404320 79 GTGGCGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--.:..:.:...........::........x.xx.x...x.........:::.:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -62628959 -31601443 +3126 chr4 + 190214555 13428917 13428916 13428983 67 GGCAAAAATTCTAATACTCTAATTTCACTTTTTTTTTTTTTTTTTTGAGAC---AGAGTCTTGCTCTGTT chr4 + 94230402 43650402 43650401 43650471 43650402 43650401 43650471 70 GGCAAAATTTCTAATAGTTTCTGACTGCTTTTTTTTTTTTTTTTTTGAGACAATAACATCTTACTTTATT .......x........x.:.xxxx:::........................---.:x:....:..:.:.. 51M3I16M 51/67 76.1% 70/94230402 0.0% 3/67 4.5% -30221485 -64008917 +3172 chr4 + 190214555 13489590 13489589 13489655 66 TCAAAAAAAAAAAAAAAATATATATATATATACACATAAATATATGTATATATACACATAAATATA chr4 + 94230402 22373484 22373483 22373549 22373484 22373483 22373549 66 TCACAAAAAAAAGAAAAATGTATTTTCATACATATATAAACATGCAAATGTATACATGTCATTATA ...x........:......:...x.x:...:.:.:.....:..:::x..:......::.x.x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -8883894 -85346508 +3201 chr4 + 190214555 13489592 13489591 13489658 67 AAAAAAAAAAAAAAAATATATATATATATACACATAAATATATGTATATATAC---ACATAAATATATAT chr4 + 94230402 85548421 85548420 85548490 85548421 85548420 85548490 70 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ............:.:x.....:...:.:.:::....x......:...x....:---....::....x:.. 53M3I14M 50/67 74.6% 70/94230402 0.0% 3/67 4.5% -72058829 -22171573 +3544 chr4 + 190214555 13491795 13491794 13491850 56 GCACACGTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCC chr4 + 94230402 76033204 76033203 76033259 76033204 76033203 76033259 56 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC .::........:.:...........::........x.xx.x...x........... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -62541409 -31688993 +4094 chr4 + 190214555 13497853 13497852 13497962 110 GACGTTGGACAAGTAATCTAAATTTTGTGAGTTTCAGTTTTCTCACCTATAAAATAGAGATTATAGTAATAG--TACTTAACAGGATTATTAAAAAGCT-TATCAATACATAT chr4 + 94230402 83501141 83501140 83501253 83501141 83501140 83501253 113 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGT ...x:...:...:.x.::...x:.x.:..x.::.........:.....:......:...x.x........x:--...:.x.....:x....:x:.:...-x......x.x.:. 72M2I25M1I13M 77/110 70.0% 113/94230402 0.0% 3/110 2.7% -70003288 -24227114 +3560 chr4 + 190214555 13502960 13502959 13503042 83 CATGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCATTTGAACCCAAGAGTTAGAGATTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......:...........::........x.xx.x.:.x..:.........::..:.xx:.::..x.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -62530237 -31700165 +3224 chr4 + 190214555 13504324 13504323 13504379 56 TAAAAAAAAAA------AATAAAAAAAGGAAACACACACACACACACACACACACACACAAC chr4 + 94230402 79014272 79014271 79014333 79014272 79014271 79014333 62 TAGAAAATAAAGCTACCAATGAAAAAAAGAAAAACACACACACACACACACAAAAAAACAAC ..:....x...------...:......:....x...................x.x.x..... 11M6I45M 48/56 85.7% 62/94230402 0.0% 6/56 10.7% -65509948 -28720454 +3628 chr4 + 190214555 13505303 13505302 13505425 123 GAAAGTGGTTTAAAGTCATAGCTGGG-----CACAGTGGTGGGCACCTGTAGTCCCAGCTATTTAGAAGGCTGAGGTGGGAGGACGACTTGAGCCCAGGAGTTCCAGAGCAGCCTGGGCAACATAGTG chr4 + 94230402 76033167 76033166 76033286 76033167 76033166 76033286 120 GAAAGTA-TGTAATGTCATGAAAGGATGATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG-----CTGTAGAACATGATG ......:-.x...x.....::xx..:-----..........--...x......:.......:..::.........x:xx.x.:.xx......:.....:..:.:::.:-----...x:x.....::.. 7M1D18M5I10M2D65M5D15M 82/115 71.3% 120/94230402 0.0% 13/115 11.3% -62527864 -31702538 +3465 chr4 + 190214555 13538352 13538351 13538461 110 TCTGTCTCTCTCTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCTCTTTCTCTCT chr4 + 94230402 63697118 63697117 63697231 63697118 63697117 63697231 114 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCT .:.:.::.....::..::xx.x..:.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:....x:xx.......:..:.:.::.:.......::.. 64M4I46M 68/110 61.8% 114/94230402 0.0% 4/110 3.6% -50158766 -44071636 +3262 chr4 + 190214555 13538356 13538355 13538465 110 TCTCTCTCTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTC-------------TTTCTCTTTCTCTCTTTCTCTCTCACA chr4 + 94230402 82976632 82976631 82976754 82976632 82976631 82976754 123 TCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCATA ...x...x......x...:..:.x....:::x::.x....:.x.x.xx..:..x.:::.:..:...:::..:........x..-------------..x:....:..::x.....:::...:. 83M13I27M 70/110 63.6% 123/94230402 0.0% 13/110 11.8% -69438276 -24792126 +3461 chr4 + 190214555 13538360 13538359 13538470 111 TCTCTCTTTTCTTTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCTCTTTCTCTCTCACACACAC chr4 + 94230402 49829809 49829808 49829918 49829809 49829808 49829918 110 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTT-------CTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACAC .:.....:.xx.......xx:-----..:.x..:.:.x.xx...x:...:x::.-...........:......-------.....:......::.:.:.::..:...x......... 21M5I28M1I18M7D37M 74/104 71.2% 110/94230402 0.0% 13/104 12.5% -36291449 -57938953 +3279 chr4 + 190214555 13538366 13538365 13538451 86 TTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTT-----TCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ......:...:....:.:x..::.:.x....xx.....---------....x:..:..-----.......:..:::::...........:..:...x.:. 38M9I11M5I37M 62/86 72.1% 100/94230402 0.0% 14/86 16.3% -50158774 -44071628 +10820 chr4 + 190214555 13542156 13542155 13542542 387 ACCTTCTTGGCGGCGGGCGCCGAG------GCCAGCAGGTCGGCTGCCATCTGCCGGCGCTTTGTCTTGTAGCGACGGTTCTGGAACCAGATTTTCACCTGCGTCTCGGTGAGCTTCAGCGACGCGGCCAGGTCTGCGCGCTCGGGCCCGGACAGGTAGCGCTGGTGGTTAAAGCGGCGCTCCAGCTCGAAGACCTGCGCGTGGGAGAAAGCGGCCCGCGAGCGCTTCTTGC-----GTGGCTTG------GGCGCCGCCGGCTCC----------TCCTCCTCCTCCGCGACGCCTGCCGGCCCGCTGCCGCC--CCCGCCGCCGGCCCCGCTGCACAGCGCGGACACGTGTGCACCTCTGGGGCCAACACCGTCGTCCTCGGTCCTTGGGCTGCGGTCGCCTGCGGACCCCGGT chr4 + 94230402 84420678 84420677 84421068 84420678 84420677 84421068 391 ATCCTTTGGGCGGCGTGTGAGAGGTTGGCCGCCTCCAGGTCGGCGGCGAGCTGCCG---CTTCCACTTGTTGCGGCGGTTCTGGAACCAAATCTTCACCTGCGTCTCGGTGAGGTGCAGCGAGGCGGCCAGGCCGGCCCTCTCGGAGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTGCGGCTGAACACCGTGCGCGTCTTCTTCTTGCGGCCGGCGGCTCGCTGCTCCGCTTCGCCCGCTTCCTCGCCGCGTTCCTCCTCTTCCTCGCGGCCT-CCGGAGCTCTGCCTcccgcccgcgg--ggccccgcgccgccgcccgcccgccgccgccc-------gcccgcTCCGT--------GTCCTCGGGCAG----CTCCGGCGAGTCCCGGT .:.:.:.x.......x.:.xx::.------...xx.........x..x.x......---...:xx.....x...:..............:..:....................x.x......x.........:.x..x.x.....:x.:.xx...........xxxx..::...xx.x:........x.........xx:.:..xx...x:.x.:x....xx:x........-----.:....:.------x..x:....x...:.----------........:...x..xx....-....xx.x.....x..--.....x.--........xx.:.x..x..xx.:.xxx:..x.-------...x:.x....--------.....:....x.----.x..x...:::...... 24M6I26M3D173M5I8M6I15M10I21M1D16M2I7M2D32M7D11M8D12M4D17M 263/362 72.7% 391/94230402 0.0% 54/362 14.9% -70878522 -23351880 +9347 chr4 + 190214555 13542195 13542194 13542471 277 GCCATCTGCCGGCGCTTTGTCTTGTAGCGACGGTTCTGGAACCAGATTTTCACCTGCGTCTCGGTGAGCTTCAGCGACGCGGCCAGGTCTGCGCGCTCGGGCCCGGACAGGTAGCGCTGGTGGTTAAAGCGGCGCTCCAGCTCGAAGACCTGCGCGTGGGAGAAAGCGGCCCGCGAGCGCTTCTTGCGTGGC----TTGGGCGCCGCCGGCTCCTCCTCC---------------TCCTCCGCGACGCCTGCCGGC--CCGCTG--CCGCCCC-------------------CGCCGCCGGCCCCG----CTGCACAGCGCGG chr4 + 94230402 84411275 84411274 84411597 84411275 84411274 84411597 323 GCCGACAGCTGTCTCTTGAGCTTGTTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGTGCAGCGCAGCGGCCAGACCGGCCCGCTCGGCGCTGCTCAGGTAGCGCTTCACGTCGAAGGTGGACTCCAGCTGGAAGACCTGGCTCTTGGAGAAGATGGTCCGCGTCTTCTTCTTGCCTCCCGCCGCTGAACACCTGCCGCTCTCTCTACCGCAGCCCCCGGTATCCCGCAGCGACGGCTGTCGGCATCCGCGGAACCTCTCCGTGGAGAGCGGTGAAACCGCGCCTTCGGCCTCGGCATCCGCGCGGCGCGG ...:x.x..:.x.x...x:x.....x...:.................:....................x.x.....xx........::.x..x.......xx.:.xx...........xxxx..::...xx.x:........x.........xx:x.x......:::..:.....xx:x........x.xx.----:..::.:..xx.x....:::..x.---------------:..x.x......x...:....--....x.--..x.:..-------------------....x:.....:..----.:..:.:...... 192M4I24M15I21M2I6M2I7M19I14M4I13M 200/277 72.2% 323/94230402 0.0% 46/277 16.6% -70869080 -23361322 +6267 chr4 + 190214555 13542215 13542214 13542377 163 CTTGTAGCGACGGTTCTGGAACCAGATTTTCACCTGCGTCTCGGTGAGCTTCAGCGACGCGGCCAGGTCTGCGCGCTCGGGCCCGGACAGGTA-GCGCTGGTGGTTAAAGCGGCGCTCCAGCTCGAAGACCTGCGCGTGGGAGAAAGCGGCCCGCGAGCGCTTC chr4 + 94230402 67334326 67334325 67334488 67334326 67334325 67334488 163 CTTGACGCGGCGGTTCTGGAACCAGATCTTCACCTGCTTCTCGGAGAGGTTCAGGTACGTGGCTATCTCGATGCGGCGCAGCCGGGACAGGTACATGTTGGACGAGAACTC-CCGCTCCAGCTCCAGGAGCTGCGTGCTGGTGAACGCCGTCCGCATCCTCTTC ....xx...:.................:.........x......x...x.....xx...:...:.xx..x::...x:xx:...x.........-::.:...xx.xx..xx.-x...........x.:..x.....:.:x..x...x..x.:....:xx.x.... 93M1I17M1D52M 116/162 71.6% 163/94230402 0.0% 2/162 1.2% -53792111 -40438291 +3017 chr4 + 190214555 13554194 13554193 13554257 64 TCATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCAGAAAT chr4 + 94230402 79265513 79265512 79265576 79265513 79265512 79265576 64 TCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACAT ...x.x.............::........xx...:.:.:::.::::.....:.:..x..:.x.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -65711319 -28519083 +3028 chr4 + 190214555 13567994 13567993 13568043 50 TCACTTAGAATAATGGCCTGCAGCTGCATCAGTGTTGCTGTAAAGGACGT chr4 + 94230402 42355658 42355657 42355707 42355658 42355657 42355707 50 TTACTTAGAATAAAGGCCTGCAGCTAAATCTGTGTTGGCCTAGAGGATGT .:...........x...........:x...x......x:x..:....:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -28787664 -65442738 +3005 chr4 + 190214555 13589689 13589688 13589762 74 CATAACTGTTAACATTTTTTAAAAGGTATGTGAAGCAAATATACTAAATTGTAAGATAGGGCAAAACTAGGTTG chr4 + 94230402 28920014 28920013 28920087 28920014 28920013 28920087 74 CAAAAATATAAGAATTCTCTATAATGCATGTGTAGGAAATATGATAAATTGTAAGACAAGACTAATCAATGTTG ..x..x.:.x.:x...:.:..x..x.:.....x..x......:x............:.:.:.x..x.x.x.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -15330325 -78900077 +3371 chr4 + 190214555 13626192 13626191 13626263 72 GCGCTTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAGTCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x..:x.:.........:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -62407014 -31823388 +3123 chr4 + 190214555 13647597 13647596 13647647 51 CTACTTTCTTTTTTCTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 17835958 17835957 17836008 17835958 17835957 17836008 51 CCACTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTAAGCTGGTGAGTGT .:.....:......:.x....................:x.:xx...x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -4188361 -90042041 +3317 chr4 + 190214555 13703674 13703673 13703725 52 AGCTGTTTTTTTGTTGTTGTTGTCTTTT-TTTTTTTTTCTTTTTCTCTTATCT chr4 + 94230402 38625017 38625016 38625069 38625017 38625016 38625069 53 AGCTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCTCTTCTCT ...................x...:....-....x....x....:.....x... 28M1I24M 46/52 88.5% 53/94230402 0.0% 1/52 1.9% -24921343 -69309059 +3192 chr4 + 190214555 13703679 13703678 13703720 42 TTTTTTTGTTGTTGTTGTCTTTTTTTTTTTTTCTTTTTCTCT chr4 + 94230402 42595728 42595727 42595769 42595728 42595727 42595769 42 TTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTTCCCT ....x.........:..:..............:......:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -28892049 -65338353 +3747 chr4 + 190214555 13704330 13704329 13704439 110 CTCCTTTTTTATT--TTTAGTTTTGTT---AACTTGTTCTTTCCCCCTCCTTTCTCTTTTCCTTACCTCCTTCCCTCCTTTCATTTTTTTCTTCCCTTTCTTCTCTCTCTCTCTT chr4 + 94230402 53764503 53764502 53764607 53764503 53764502 53764607 105 CTCTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTC----------TCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCT ...:....x....--........x...---.....xx::...:......----------.....x....:........:.:..:x:::x.:.:.....x.......x:..:.::. 13M2I12M3I19M10D56M 74/100 74.0% 105/94230402 0.0% 15/100 15.0% -40060173 -54170229 +3061 chr4 + 190214555 13704402 13704401 13704453 52 CTTTCATTTTTTTCTTCCCTTTCTTCTCTCTCTCTCTTTTCCCAGCTTTCCT chr4 + 94230402 33204884 33204883 33204935 33204884 33204883 33204935 52 CTTCCATTTTTTTCTTCCCTTTTTCTTCTCACTCTGTTTTTGCTGTTTGCCT ...:..................:.::....x....x....:x.x.:..x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -19500482 -74729920 +3058 chr4 + 190214555 13707554 13707553 13707612 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -62325652 -31904750 +3307 chr4 + 190214555 13711032 13711031 13711103 72 GCACATGTAGTCCCAGCTACTCGCGAGGCTGAGGCAGGAGAATCATTTGCACCCTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:......:.........:.x:........x.xx.x...x..:...x....x.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -62322174 -31908228 +3022 chr4 + 190214555 13760625 13760624 13760682 58 ACAAACTGGAGTTAAAATAAGTGCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 43989478 43989477 43989535 43989478 43989477 43989535 58 ATAAATTAAACTTCAAAAAAATAATGATTGTTTTTTTCTTTTTTTTTTTTTCCTTCTT .:...:.::.x..x...x..:.:x.....x.......:.............::..:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -30228853 -64001549 +3006 chr4 + 190214555 13822216 13822215 13822293 78 CTTGAGGAAGGAGTTCAGACTCTTGAAAGTAACCACTCTTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTAAAGTGCCA chr4 + 94230402 39644780 39644779 39644857 39644780 39644779 39644857 78 CTTTTAGAGGAAATTAACATTTTAAGAAGCATGTACTTTTTTTTTTCTTCTTCTTTTTTTCTTTTCAGGAAAATGCTA ...xx:..:.:.:..x.x.:.:.x::...:.xx:...:.....:...........:....:....:xxx...:...:. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -25822564 -68407838 +3148 chr4 + 190214555 13822256 13822255 13822289 34 TTTCTTCTTCTTCTTCTTTTTTTTTTTTTAAAGT chr4 + 94230402 80468482 80468481 80468515 80468482 80468481 80468515 34 TTTCTTCTTCTTCTTCTTTTTTTTTTTTTAAAGT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -66646226 -27584176 +3001 chr4 + 190214555 13827038 13827037 13827084 47 AACTAAAATTTCTTTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 86769275 86769274 86769321 86769275 86769274 86769321 47 AATTAAAGCTTCTTTCCTTTTTTTTTTTTTTTTTCTCTTCCTTAAAG ..:....::........:................:.:..::..x:.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -72942237 -21288165 +3109 chr4 + 190214555 13846525 13846524 13846580 56 CATTATTAATCTCATTTTACAGAGGGAGAAATTGAGGCCCAGAGAGATTCAGTGTT chr4 + 94230402 28016197 28016196 28016252 28016197 28016196 28016252 56 CAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGTCTT ..x.....x..:...........x........:.x.::x.......::.:...x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -14169672 -80060730 +3088 chr4 + 190214555 13869940 13869939 13869991 52 TGTGTGTGTGTGTGTGTGTTTACCTGCAGGTGCACTTGCATATATAAGAAAA chr4 + 94230402 63364618 63364617 63364669 63364618 63364617 63364669 52 TATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTATACATAAGAAAA .:....::.....:......:..x..::x..::.....:...:......... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -49494678 -44735724 +3349 chr4 + 190214555 13931927 13931926 13931980 54 CCCAGAACTTTAGTATGTGCCTTTTTTTTTTTTTTTTTTTTTTGTAAATACCTT chr4 + 94230402 42674943 42674942 42674996 42674943 42674942 42674996 54 CCCAGGTCTTTAGTACCTGTTTTTTTGTTTTTGTTTTGTTTTTGTAAGTACCTT .....:x........:x..::.....x.....x....x.........:...... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -28743016 -65487386 +3994 chr4 + 190214555 13951162 13951161 13951310 149 GCCGGAAAGGAGTAGAGATATTTATTGATTGACTTGACTCTGTATGTGTGTGTGTGTGTATACATATACATATATGTGTGTATACATATACATATATGTATGCATACATACATACATATACATGTGTGTATACATATATGTATACACAT chr4 + 94230402 85834510 85834509 85834647 85834510 85834509 85834647 138 GCCAGAATGTAGTTTGGGTTTTT---TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATAC--------ATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT ...:...x.x...xx:.:.x...---x...x.:...xx.....:.............:.xx.::..x:....:..:...:x....--------..:.x......:.......:....:xx.xx.x.x:.x.x.x.x.:.:.:....x.. 23M3D59M8D56M 93/138 67.4% 138/94230402 0.0% 11/138 8.0% -71883348 -22347054 +3089 chr4 + 190214555 13951222 13951221 13951324 103 TACATATACATATATGTGTGTATACATATACATATATGTATGCATACATACATACATATACATGTGTGTATACATATATGTATACACATAAACATATACGTAT chr4 + 94230402 66286764 66286763 66286866 66286764 66286763 66286866 103 TACTTTCACCAACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTTAT ...x.x:..xx.:.:.....x..::..:.:x.:..x..x..::..:x::........:.:...:.x..:.:..x.:.:::.:.::...:x.:::...:.x... 103M 60/103 58.3% 103/94230402 0.0% 0/103 0.0% -52335542 -41894860 +3274 chr4 + 190214555 13951255 13951254 13951315 61 ATATGTATGCATACATACATACATATACATGTGTGTATACATATATGTATACACATAAACA chr4 + 94230402 42936216 42936215 42936276 42936216 42936215 42936276 61 ATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGCTGAAATA ..:.:...:.....x...........:..x.....:.:...x...:.:...::.xx...:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -28984961 -65245441 +3637 chr4 + 190214555 13951329 13951328 13951401 73 ATATATGTATACACATATAAACACATACACATAAACATATATACATATATGTGTGTATATATGCATATATGCA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGT--ATATTTGTGTGTGTATATGCATGCACGTA .:.:.::...x.....::........:..:.:...x....:.--....x.......:.........::.:.:. 42M2D29M 53/71 74.6% 71/94230402 0.0% 2/71 2.8% -8648869 -85581533 +3148 chr4 + 190214555 13951421 13951420 13951577 157 ATATGTACATGTGTATATATACACATGTACACACACACATATATACATATATTCACATATATACATATAGACACACACATATATTCACATATATTCTCACATATATATGTATGTGTGTATGTGAGAGAGAGAGA-TACATTTT-----GGAAGACAGTTTTAG chr4 + 94230402 21109179 21109178 21109335 21109179 21109178 21109335 157 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTC------ATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACAGTTTCAG ...x.x.x..x..:x....:.::::...x:x::::x:.:...x..:..:..:.........:x.:.:..xx:.:..::..:..:..------..x..:x::.:.......:.:..x:....::x.x:x:x....-....x...-----..x:x.......:.. 86M6D42M1I8M5I15M 91/151 60.3% 157/94230402 0.0% 12/151 7.9% -7157758 -87072644 +3180 chr4 + 190214555 13997458 13997457 13997539 82 GCTGGGATTACAGGT---GCGAGCCATTGCTCCTGGTAATTTTTTTGTTTATTTGTTTTGTTTTGTTTTGTTTTAAATAGTCCAA chr4 + 94230402 69745560 69745559 69745644 69745560 69745559 69745644 85 GTTGGGGTTTTTGGTTGGGTGGGTGGATTTTTTTGTTAATTTCTTTGATTGTTTATTTTGCTTTGGTTTGTTTTTAATATCCCAA .:....:..x:x...---.:.:.:x:x.x:.::..x......:....x..:...:.....:....x........x....x:.... 15M3I67M 57/82 69.5% 85/94230402 0.0% 3/82 3.7% -55748102 -38482300 +3150 chr4 + 190214555 14023812 14023811 14023870 59 GAGTGCTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTTCTCTTTCTCTCTCT chr4 + 94230402 72001423 72001422 72001481 72001423 72001422 72001481 59 GACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCT ..x...:...:..:::x...:..x.:.:...:.........:...:.:......::... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -57977611 -36252791 +3186 chr4 + 190214555 14032889 14032888 14032983 95 TTCTTTTCCTGG-----GGGGATTATTTGATTGATCTTGTTTGAGTTACTTAGCCTCTCTGTGTCTCAATATTCTGATCTCTAAAACTGGGATAATAATG chr4 + 94230402 21140858 21140857 21140956 21140858 21140857 21140956 99 TTCTTTTCATGACTGCAGAGGACTTGCTGGGTGG-CTTCTGAGTGTTATTTTACCTCACTGTGCCTCATTTTCCTGATCTACAAAACAGGGACATTAATG ........x..:-----.:...:.xx:..:x..:-...x.xx.x....:..x:....x.....:....x.x.:.......x:.....x....:.x..... 12M5I17M1D65M 67/94 71.3% 99/94230402 0.0% 6/94 6.4% -7107969 -87122433 +3194 chr4 + 190214555 14081794 14081793 14081895 102 GGGCAGTGAGCAGTTTGGGGCAAAAACTCATCTCATCACCTACTTTCTCAGACCTCTCCTGGTCTAACTAGTGTAAGATGGGTTCTTTGAGAAGCAAGCACT chr4 + 94230402 52972634 52972633 52972729 52972634 52972633 52972729 96 GAGAAGTGAGCAGTTCAGAACAAATCTTGGTCCCATTTCCTGCTTTCTCAGGCCCCACCTGGGTCTTTTAGTACAGGGCAGAC------AGGAGGAAGCCCT .:.x...........::.::....xx:.x:..:...:x...:.........:..:.x.....x::xx:....::.:.:::.::------..:..x....x.. 83M6D13M 61/96 63.5% 96/94230402 0.0% 6/96 6.2% -38890840 -55339562 +3114 chr4 + 190214555 14192342 14192341 14192399 58 CAATTTTTGTGTATATATATATATATATATATATATATTTTTTTTTTCTTGTTGAGAT chr4 + 94230402 34623067 34623066 34623124 34623067 34623066 34623124 58 CAGATTTTCTATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGAT ..:x....x.:.......xx......:......:.:....:......::...:::... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -20430725 -73799677 +3503 chr4 + 190214555 14204629 14204628 14204799 171 TTTTTCTTTTTCCTTAAATACAAAC-TTCTATGGGCTCGATTTCTTTCTTGTAAAGTTAGCATATCTCCCATGTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697082 63697081 63697239 63697082 63697081 63697239 158 TTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCT---------------TTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:.:x..x.x:......:::.::-:..:.::.:..:x...:..:..:.---------------:...x:...:..-.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:.x.:. 25M1I24M15D12M1I95M 94/156 60.3% 158/94230402 0.0% 17/156 10.9% -49492453 -44737949 +3858 chr4 + 190214555 14204643 14204642 14204815 173 TAAATACAAACTTCTATGGGCTCGATTTCTTTCTTGTAAAGTTAGCATAT-----CTCCCATGTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 63697054 63697053 63697239 63697054 63697053 63697239 186 TGAGTATGAATTTCAGTAATTTCCATG-CTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.:..::..:...x:.::x:..x..x-.......:.x.x:..x:x..:.-----....xxx.x....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.:.::..........:....:.x... 27M1D22M5I27M5I59M4I37M 107/172 62.2% 186/94230402 0.0% 15/172 8.7% -49492411 -44737991 +3333 chr4 + 190214555 14204689 14204688 14204807 119 ATATCTCCCATGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697121 63697120 63697239 63697121 63697120 63697239 119 ATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x:...:.x.x..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:.x.:. 119M 70/119 58.8% 119/94230402 0.0% 0/119 0.0% -49492432 -44737970 +3057 chr4 + 190214555 14204701 14204700 14204783 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167326 -51063076 +3364 chr4 + 190214555 14204702 14204701 14204811 110 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697130 63697129 63697239 63697130 63697129 63697239 110 CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:.x.:. 110M 66/110 60.0% 110/94230402 0.0% 0/110 0.0% -49492428 -44737974 +3057 chr4 + 190214555 14204705 14204704 14204787 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167322 -51063080 +3571 chr4 + 190214555 14204706 14204705 14204815 110 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.:.::..........:...... 18M5I59M4I33M 72/110 65.5% 119/94230402 0.0% 9/110 8.2% -49492411 -44737991 +3057 chr4 + 190214555 14204709 14204708 14204791 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167318 -51063084 +3258 chr4 + 190214555 14204710 14204709 14204817 108 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTTTTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.:.::..........::... 18M5I59M4I31M 69/108 63.9% 117/94230402 0.0% 9/108 8.3% -49492407 -44737995 +3057 chr4 + 190214555 14204713 14204712 14204795 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167314 -51063088 +3057 chr4 + 190214555 14204717 14204716 14204799 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167310 -51063092 +3057 chr4 + 190214555 14204721 14204720 14204803 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -43167306 -51063096 +3067 chr4 + 190214555 14204725 14204724 14204819 95 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTGA chr4 + 94230402 57372027 57372026 57372121 57372027 57372026 57372121 95 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGA .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x:x..x..x.. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -43167302 -51063100 +3160 chr4 + 190214555 14204729 14204728 14204831 103 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTGAGTTAGA-GTTTCA chr4 + 94230402 57372027 57372026 57372128 57372027 57372026 57372128 102 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATT--GTTAGATATTTCA .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x.x..--......-:..... 89M2D6M1I6M 67/101 66.3% 102/94230402 0.0% 3/101 3.0% -43167298 -51063104 +3038 chr4 + 190214555 14217728 14217727 14217764 37 ATCTCTGTTTCCCCCTCTTTTTTTTTTTTTTTCCTTT chr4 + 94230402 3670423 3670422 3670459 3670423 3670422 3670459 37 ATCAATGTTTCCCCCTCTTTTTTTTTTTTTTTCCTTT ...xx................................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 10547305 NA +3228 chr4 + 190214555 14227997 14227996 14228105 109 AGCTTTGTTGAACTTCTGTGTTAGTTGTTTTCCTCTCTTTTCCCTGGAATATAGTATTTTAGAAAAAAAAAAAAAAAGCAAACATTCATTCATTTTAATGTAATGCTTC chr4 + 94230402 28464095 28464094 28464203 28464095 28464094 28464203 109 AACTCTATTTCACTTATTTGCTGTTCATGGTTACATCTTACACTCAAAATAGAGTCTCTTAAAAAAAAAAAAAAAAAGCACAAATTTTCCCTTTTTTTTTTCATGTTTC .:..:.:..xx....x.x..:.:x.::.xx.:x:x....x:x.::::....x...x.:...:..................x.x...:x::.x....xx.x.x...:... 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% -14236098 -79994304 +3224 chr4 + 190214555 14297677 14297676 14297736 60 AAAAAAAAAAAAAAAAAAAAAAGAGAAGAAAAAGAAAAAGAAAAAAGAAAAAGAAAAAAT chr4 + 94230402 54037034 54037033 54037093 54037034 54037033 54037093 60 AAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGAT .....:.................x....:xx:..:.:x.:..:.x...:.:......:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -39739357 -54491045 +3056 chr4 + 190214555 14297692 14297691 14297748 57 AAAAAAAGAGAAGAAAAAGAAAAAGAAAAAAGAAAAAGAAAAAATTTATGGAATAAA chr4 + 94230402 71489672 71489671 71489728 71489672 71489671 71489728 57 AAAAAAAGAGAAGGAAAAGAACTAGCAAAAGAAAAAAGAAAATAGTTGCATAAGAAA .............:.......xx..x....::..........x.x..:::x..x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -57191980 -37038422 +3735 chr4 + 190214555 14299008 14299007 14299090 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:...........::........x.xx:x...x.:.........:.:..x.xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -61734189 -32496213 +3186 chr4 + 190214555 14299121 14299120 14299184 64 CTGGGTGGCA---GAGCAAGACAGTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382701 88382700 88382767 88382701 88382700 88382767 67 CTGAGCAGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAA ...:.::...---...........:x.........::.:..............:x.x.:..:x.x.. 10M3I54M 49/64 76.6% 67/94230402 0.0% 3/64 4.7% -74083580 -20146822 +3245 chr4 + 190214555 14306017 14306016 14306107 91 ATTAAAAAAAAAAAAAAAAAAAAAGGAAGAAGAGGACAAAGAGGCA---GCAAAACAGGCCATGGAAAAGAGAGGAGAAAAAGGCCTGTGTGGT chr4 + 94230402 85790956 85790955 85791046 85790956 85790955 85791046 91 ATTAAAAGAAGAAAAAA---AAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAACCCAGAAGATGGCTGTTGTGGT .......:..:......---.....:..:......:x.::.:....---.x.:.....:x.....::.::.:xxx....:.x...:xx...... 17M3D26M3I45M 62/88 70.5% 91/94230402 0.0% 6/88 6.8% -71484939 -22745463 +3500 chr4 + 190214555 14316397 14316396 14316486 90 ACAGCCACACTGTTTATGTATATATTATTTCAGAGTGTTCTGTTTATTTTTCCCTTTGATTTTCTTTTTTCTCTGTGTTTTATTTTGGAT chr4 + 94230402 87141057 87141056 87141145 87141057 87141056 87141145 89 ATAGTTTCATTGTTTTCACAT-TAATATTTCAAGGTATTCTGTTTATCTTCCCTTTTGACTCTCACTTTTACCCACATTTGATTTGAAAT .:..::x..:.....x:::..-..x.......::..:..........:..:..:.....:.:..x:....x:.::::...x....x::.. 21M1D68M 59/89 66.3% 89/94230402 0.0% 1/89 1.1% -72824660 -21405742 +3048 chr4 + 190214555 14335901 14335900 14335969 69 TCACAAAATAGGCTGTGAAGTAGTTAATTTTATTATCTCTATTTTACAAATAAGGAAACTGACATATAG chr4 + 94230402 57026337 57026336 57026405 57026337 57026336 57026405 69 TCTCAAAACATTTTACAAAGTAAATGGCTTTATTATCTCTACTTTATAAATAGAGTAAGTGGCATGAAG ..x.....:.xx:.:::.....:x.:::.............:....:.....::.x..x..:...:x.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -42690436 -51539966 +3294 chr4 + 190214555 14341996 14341995 14342054 59 GTAAGTAGAGTTATCCTCATTTTACAGATGAGGAAACTGAGGTGCAGGGAGACTAAGTC chr4 + 94230402 28016192 28016191 28016250 28016192 28016191 28016250 59 GTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGTC .....:.:x:....:.:.............::....::.x.:.:...:...:..x.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -13674196 -80556206 +3407 chr4 + 190214555 14380017 14380016 14380112 96 AACTCATTTTACATAGGTCGCTGAACAGCCAGCAGACAGTAATGACCCT------CTATTGACCTCATCAGGGAGGATTTGAACTGATAAAGTATGGGTGAA chr4 + 94230402 61065919 61065918 61066016 61065919 61065918 61066016 98 AACTCATTTTACATAGGCCACTGATCAACCATTAGATAGTAATGAATTTTAGTCACTAGCAACCTGA----GACAGATATGAACCAGTGACCTGCAGGTGAA .................:.:....x..:...x:...:........x::.------...x::....x.----.:x:...x.....:::.:.xx.:::...... 49M6I12M4D31M 65/92 70.7% 98/94230402 0.0% 10/92 10.9% -46685902 -47544500 +3036 chr4 + 190214555 14381019 14381018 14381098 80 AGGGGTGGACACCTGCAATCCCAGCGACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....--...x..:.:.:.....x.....::........x.xx.x...x..........::.:.:x:xx:..:..:.. 7M2D71M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% -61652181 -32578221 +4045 chr4 + 190214555 14389397 14389396 14389512 116 AATATATACATATATGTGTGTGTGTGTGTATATATATATATGTATATATACATGCGTGTGTATATATATATGTATATATATGTGTGTGTATATATATGTGTGTGTGTAGATATATA chr4 + 94230402 21109186 21109185 21109301 21109186 21109185 21109301 116 AATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.::x:...:........x.x....x:::...x........:x:.:.:..:.x:.....:x....::.:.:..:x:...:x.x...:.....:...:..x:.:.:x..::.:. 116M 72/116 62.1% 116/94230402 0.0% 0/116 0.0% -6719789 -87510613 +3485 chr4 + 190214555 14389401 14389400 14389484 84 TATACATATATGTGTGTGTGTGTGTATATATATATATGTATATATACATGCGTGTGTATATATATATGTATATATATGTGTGTG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x...x.:...x...........:.:.:...xx.....x::......::..:x:..:..:.x....:.:.:...::::::.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -71445132 -22785270 +3920 chr4 + 190214555 14389415 14389414 14389482 68 TGTGTGTGTGTATATATATATATGTATATATACATGCGTGTGTATATATATATGTATATATATGTGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...:..:::..x:.......x.:....................:..x.....::..x...:.. 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% -72244509 -21985893 +3790 chr4 + 190214555 14389459 14389458 14389541 83 TATATATATGTATATATATGTGTGTGTATATATATGTGTGTGTGTAGATATATATATACATATATATACATATATACACATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x...:.x.:.:.........:.:...xx:...:x.::..x....:..x......:.x...:..:.:.......:.. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% -71445074 -22785328 +3042 chr4 + 190214555 14389475 14389474 14389532 58 TATGTGTGTGTATATATATGTGTGTGTGTAGATATATATATACATATATATACATATA chr4 + 94230402 44815600 44815599 44815656 44815600 44815599 44815656 57 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA-ATATA ..........:...:.....x:........x..x.:.x..:.....:.:.:.-..... 52M1D5M 45/57 78.9% 57/94230402 0.0% 1/57 1.8% -30426125 -63804277 +3182 chr4 + 190214555 14389517 14389516 14389654 138 CATATATATACATATATACACATATATATACATATATATACACATATATATACATATATATATATGTATATATACACATATATATATATGTATATATATACATATATATATACATATATATACACATATATATACGTA chr4 + 94230402 25906314 25906313 25906451 25906314 25906313 25906451 138 CATATACTCACAATCTTGAAAATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATA ......:x:...xx:x.:x.x....x:.x....:x....x.x....xx:.x.x...:x.x.:xx.x.x.x..:.:.:x.:.x.::...::.:..x.::.:..:.:x.x...x........x......::x.....:.. 138M 82/138 59.4% 138/94230402 0.0% 0/138 0.0% -11516797 -82713605 +3312 chr4 + 190214555 14389523 14389522 14389630 108 TATACATATATACACATATATATACATATATATACACATATATATACATATATATATATGTATATATACACATATATATATATGTATATATATACATATATATATACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .......:.:.::x:x.:.:x::::..x.....::..x:.:......x::.:..:x...:::...:...x...::x.x.:.:.:...:.:...:x....::..::... 108M 62/108 57.4% 108/94230402 0.0% 0/108 0.0% -6719671 -87510731 +3131 chr4 + 190214555 14389532 14389531 14389587 56 ATACACATATATATACATATATATACACATATATATACATATATATATATGTATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x....:.:.:.:....:x.:.......x........:.......:...x..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -60136542 -34093860 +3370 chr4 + 190214555 14389578 14389577 14389700 123 ATATGTATATATACACATATATATATATGTATATATATACATATATATATACATATATATACACATATATATACGTATATATATACATATATATATACACATATATACGTATATATATACATA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.x.x..x.:.x:...:..:.:.:.x.x.:.:x::::..x.....:...x:.:......x.:.:..:x..::::...:..:x...::x.x.:.::.:..:.:..:.x....::..:..:. 123M 70/123 56.9% 123/94230402 0.0% 0/123 0.0% -6719601 -87510801 +3358 chr4 + 190214555 14389603 14389602 14389712 110 TATGTATATATATACATATATATATACATATATATACACATATATATACGTATATATATACATATATATATACACATATATACGTATATATATACATATATATATACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT--GTATATGTGTATGAATATGCATGCACA ...::..:.:.:.x:x.:.:x:::..:x.....:...x..:.....:x...:..:x.....:...:..:x:.::.x.x.:.--......:.:..::x....::..:.... 81M2D27M 66/108 61.1% 108/94230402 0.0% 2/108 1.9% -6719591 -87510811 +3000 chr4 + 190214555 14389614 14389613 14389669 56 ATACATATATATATACATATATATACACATATATATACGTATATATATACATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x..:.:.:.:.:....:x.:.......x................:..:x..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -60136460 -34093942 +3057 chr4 + 190214555 14412770 14412769 14412833 64 AAAAAAAAAAAAAGGAAAAGAAAATGGAAAAAAGAACAAAATAAGATCTATAGCTCACTATCAT chr4 + 94230402 78526120 78526119 78526183 78526120 78526119 78526183 64 AAAAAGAAAAAAAGAAAAAGAAAATGGAGTACCTTTTAAAGTAAAGGCTCTAACTCACTCTCAT .....:........:.............:x.xxxxx:...:...::x..x..:......x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -64113350 -30117052 +3354 chr4 + 190214555 14412770 14412769 14412833 64 AAAAAAAAAAAAAGGAAAAGAAAATGGAAAAAAGAACAAAATAAGATCTATAGCTCACTATCAT chr4 + 94230402 78521288 78521287 78521351 78521288 78521287 78521351 64 AAAAAGAAAAAAAGAAAAAGAAAATGGAGTACATTGTAAAGTAAAGGCTCTAACTCACTCTCAT .....:........:.............:x.x.xx::...:...::x..x..:......x.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -64108518 -30121884 +3024 chr4 + 190214555 14438060 14438059 14438104 45 AAGTGACTGTTCTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGG chr4 + 94230402 82956929 82956928 82956973 82956929 82956928 82956973 45 AAGTAATTGTTGTGGGTTTTTTTTCCTGTTTTTTTTTTTTTTTGG ....:.:....x...x........::.x................. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -68518869 -25711533 +3082 chr4 + 190214555 14467518 14467517 14467576 59 TTTTATATCAGTTTTCTAGAACTATATATGCATATTCCAAGATGAGAGTAATATATCCA chr4 + 94230402 85507254 85507253 85507312 85507254 85507253 85507312 59 TTCTACATCACTTCACTAGAAGTATATATGCATATTCTAAAAGGAAAATGCTATCTTCA ..:..:....x..:x......x...............:..:.x..:.:.:x...x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -71039736 -23190666 +3267 chr4 + 190214555 14470871 14470870 14470944 74 TTGATCGTAGCAAGCATATTTATTAGAAGTCTTTCTTCATTCCTCTCTCTTCTTTCAAATCCTCTTTCTTCTTC chr4 + 94230402 3411356 3411355 3411429 3411356 3411355 3411429 74 TTAACCATATTAAGCATATTTAGCTTAAATCTTTCTTCATTGGCACTGTTGCCTTCAAGTCTTCTCTCTTCTTC ..:.:.:..x:...........x:xx..:............xx:x::x:.x.:.....:..:...:........ 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 11059515 NA +3101 chr4 + 190214555 14560873 14560872 14560932 60 GGAGGGGGGCAAAGAGAAAAGAAGGGAGGGAGGGAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 32265570 32265569 32265629 32265570 32265569 32265629 60 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ...:..::.x.......::...:.:..................::x.:x.::...:x.:. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -17704697 -76525705 +3137 chr4 + 190214555 14575121 14575120 14575203 83 CATGGTGGCACTCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.x..--....:.:...........::........x.xx.x...x.:......x.::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -61458076 -32772326 +3146 chr4 + 190214555 14586216 14586215 14586282 67 CTCAAAAATAAAAATACAACATAAATAAGTGAATAAAACTTAAAAAAAAAAAAAAAAGCAAGCAAAG chr4 + 94230402 11487979 11487978 11488039 11487979 11487978 11488039 61 CTCAAAGGCCCAAATA------AAATAAATAAAGGAAACTTAAAAAAAAAAAAAAAAGCATGTCAAG ......:::xx.....------......:.:..x:.........................x.:x... 16M6D45M 49/61 80.3% 61/94230402 0.0% 6/61 9.8% 3098237 NA +3281 chr4 + 190214555 14614457 14614456 14614515 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCCGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x..x.x...xx:.x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -61418749 -32811653 +3738 chr4 + 190214555 14639543 14639542 14639690 148 CTCTCTTCTCCTCTCCTCTCCTCCCCTCCCCTCCTTTCCCTTTCCCTTTCCCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTCTT------TCCCTTCCTTCCTTCTTTCCTTCCTCTTTTCT chr4 + 94230402 3415316 3415315 3415469 3415316 3415315 3415469 154 CTTTCCTTTCCTATTCTTTTTTCATTCCTAGTCCTATTCCTTTCACATTCCTATTCAATTCCTATTCCTTCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTTTGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCTCCCCACCCTTTGCT ..:..:.:....x.:..:.::..x:::.:xx....x.:......x.x....:x:.:xx..:..x.:.:.:...xxxxxx.....:.:.:.:.x...:.::...x.:...:..:.x.------....x:.::..::...:...::x.:....x.. 116M6I32M 87/148 58.8% 154/94230402 0.0% 6/148 4.1% 11224227 NA +3502 chr4 + 190214555 14639556 14639555 14639693 138 TCCTCTCCTCCCCTCCCCTCCTTTCCCTTTCCCTTTCCCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTTTCT------------TTCTCTTTCCCTTCCTTCCTTCTTTCCTTCCTCTTTTCTTTT chr4 + 94230402 50176266 50176265 50176413 50176266 50176265 50176413 148 TTTTCTGTCTCACTGCTCTCCTTTC--TTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCT .::...x:::.x..x.:........--..:.::.x...x:.:x::...x:x.:x...:...:x.:...:x.x.::x.:...x.:............------------.:.:.x..::...x::.........:...:...:.::x..:. 25M2D69M12I42M 84/136 61.8% 148/94230402 0.0% 14/136 10.3% -35536710 -58693692 +3089 chr4 + 190214555 14639577 14639576 14639675 99 TTTCCCTTTCCCTTTCCCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCTT chr4 + 94230402 76521904 76521903 76522002 76521904 76521903 76522002 99 TTTCCCATGCTGGGTTGTCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTT ......x.x.:xxx.:x::..........::.....:.x....x...x:.:.:xx...:...:...:.x.:..:x....x:..x:.x::..::..x... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% -61882327 -32348075 +3022 chr4 + 190214555 14639596 14639595 14639681 86 CTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCTTTCCTTC chr4 + 94230402 42777153 42777152 42777238 42777153 42777152 42777238 86 CTCTCTGGGTTCCCAACCATACTGTCTTACCTACTCTCCATGTTTTCCATCATTTTCTCTCCTCCCCTCCCTTCCTCCCTCCTCTC ..:...xxx..:..xx..x.x..x:...x.:.x..:..:x.x.....:x..x..:.:....:.:....:.......:.:.:.::.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -28137557 -66092845 +3261 chr4 + 190214555 14641662 14641661 14641815 154 ATATTGAGACATTTCAGCCTCCACAATCA-TGGGAGCCCATTCCTTACAG-CAAATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTA--TAGACATA---GTCTACATAT chr4 + 94230402 26578211 26578210 26578371 26578211 26578210 26578371 161 ATGTTCAGACTCCTCACCTTCAAAGCTCAGTAGGGCTTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCTTGGTGCAGTAAGTAAACATACTGGTCTTCATAT ..:..x....x::...x.:..x.x:x...-.:..:x:::::..:.x:..:-.x...:...................:.:.:.x.x.xx:...:...:.x.:..:.....x:xx.x:x.x..:x.x.x.xx...:.x..--..:.....---....x..... 29M1I20M1I87M2I8M3I10M 98/154 63.6% 161/94230402 0.0% 7/154 4.5% -11936549 -82293853 +4296 chr4 + 190214555 14641701 14641700 14641902 202 TTCCTTACAGCAAATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATGTGTGTG-TGTGTG-TGTGTGTGTGTGTGTGTATTATAGACATAG-------TCTACATATA---TGTATACATACATACATATATACATGTGTGTATATATATATATAGTACGTGTGTGTGTGTGTGTGTGGAGAGAGGTGTATACAGAA chr4 + 94230402 4618348 4618347 4618557 4618348 4618347 4618557 210 TTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGT-TGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatat----atgtatgtatataAAA ..:...:::x.xx........::..............x:....::......x.x......-...:x:.:.:-.:.:.:-.:.:...-...::xx:..x..::..x....-------.:..:x...:---:....x.xxx:...:.......:......xx:xx..:.....:.:...:.:.:.:::.:.:.:.:.----.x:x:......:.:.. 60M1I10M1I6M1I7M1D22M7I10M3I66M4D16M 127/197 64.5% 210/94230402 0.0% 18/197 9.1% 10023353 NA +3041 chr4 + 190214555 14641704 14641703 14641763 60 CTTACAGCAA--ATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAT chr4 + 94230402 81889423 81889422 81889484 81889423 81889422 81889484 62 CTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACAT ....:.x:..--...:......:.:x......:......:......x.x...:...:..:.. 10M2I50M 46/60 76.7% 62/94230402 0.0% 2/60 3.3% -67247719 -26982683 +3040 chr4 + 190214555 14641741 14641740 14641786 46 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857611 6857610 6857656 6857611 6857610 6857656 46 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ......::..:...::....x..........x...........x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 7784130 NA +3009 chr4 + 190214555 14641742 14641741 14641788 47 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x:.........x...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 7784132 NA +3232 chr4 + 190214555 14641762 14641761 14641831 70 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATAGACATAGTCTACATATATGTATACATACATAC chr4 + 94230402 64918398 64918397 64918467 64918398 64918397 64918467 70 ATGTCTTTGTTCATACGTGTTTGTATGTGTACACTTTATATACATTATGCATATATGTACACATACATGC ....x.x...x::.::....x...:.....::.:.x..x.:.:.x.x.:..........:........:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -50276636 -43953766 +3096 chr4 + 190214555 14641810 14641809 14641859 50 ACATATATGTATACATACATACATATATACATGTGTGTATATATATATAT chr4 + 94230402 32744981 32744980 32745030 32744981 32744980 32745030 50 ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT .:...x..::.........:...x:.:.:...........:...:..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -18103171 -76127231 +3128 chr4 + 190214555 14652803 14652802 14652908 106 CTGGAAAGTAGGTGTGGGAGAGAGGGATAGAAAGAGGGAGAGGGAGAGGGAAAGGGAGAGGGGGAGAGAGAGGAGGGGAGAGAGAGAGAGAGGGAGAGAGAGAGAG chr4 + 94230402 73744686 73744685 73744789 73744686 73744685 73744789 104 CTGGAA--TAAATATGAAATTAAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ......--..::.:..::.xx:.:.x...::xx:.:...:.::..:..........::.:.:.:.:..:.:::.:...:.:.:.x.:.:x....:x:..:..x:.. 6M2D98M 60/104 57.7% 104/94230402 0.0% 2/104 1.9% -59091883 -35138519 +3090 chr4 + 190214555 14687840 14687839 14687882 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -12318156 -81912246 +3631 chr4 + 190214555 14724766 14724765 14724882 117 GCAGCAAACCAACATGGCACATGTA-----TACCTATGTAACAAACCTGCACATTCTGCACATGTATCCCAGAACTTAAAGTATTAAAAAAAAAAAAAAAAAAAAAAAAAAGATGTT--CAGCT chr4 + 94230402 13642906 13642905 13643029 13642906 13642905 13643029 124 GCAGCCAGCCAACAGGGAAGCCGTAAGTGTGACCTATGATTTAAAGACACATTTTCTACCCATGCATGCCAGTACATTGGGGGAAAATAGAAAAAAGAAAAAAGAAAAAAGGATGTTAACAGCT .....x.:......x..x.xx:...-----x.......xxx:...xx::..:x....:.x....:..x....x..x.x::.x:xx..x.:......:......:......:......--..... 25M5I87M2I5M 81/117 69.2% 124/94230402 0.0% 7/117 6.0% 1081860 NA +3647 chr4 + 190214555 14731437 14731436 14731509 73 TGTGCCCATAGTCCCAGCTACTTGGAAGGCTGAGGCCGGAGGATCACTGGAGCCTGGGAGATTAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x::....:...........:.........x..x.x.:.x....x..:..::.:..x..x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -61301768 -32928634 +3187 chr4 + 190214555 14731547 14731546 14731657 111 ACAGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAGAGAGAGGGAGAATAATACTGGTTTTGACATTGCCTTCAAGAAGCA------TACATTTTTG chr4 + 94230402 14310248 14310247 14310364 14310248 14310247 14310364 117 ACAGAAGTGCTACCCTGGGATTAAGAAAAAAGAATCAAAAGAAACAAGCAGGAGAGAAAAAAGAAAAGCGAAACTTGCTCTGCCCTTCCTCCCAAGCAGCAGTGACTTACACCTTTG .....:::x..::.:::::.xx..:......:..xx........x:.:x.::.....:.:.:.:.:.:::.x...x.:.:..x.x..x.:::....x....------....::.... 101M6I10M 67/111 60.4% 117/94230402 0.0% 6/111 5.4% 421299 NA +3486 chr4 + 190214555 14740833 14740832 14740911 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x.:........x:.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -61292368 -32938034 +3407 chr4 + 190214555 14750190 14750189 14750285 96 GACCTTAGGCAAGTTACCTAACATCACTGAGCTTCTGTTTTCCCATTTGTAAAATGAGGATAATTATACCTATTCA------GAGGTTGTTGTGAAGATTAA chr4 + 94230402 83501141 83501140 83501242 83501141 83501140 83501242 102 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAA ...::.:.....:....:....x.xxx..x..:..x.........::.........::.x.:..x:..x:..:::.------::..x.:......:.x.x.. 76M6I20M 64/96 66.7% 102/94230402 0.0% 6/96 6.2% -68750951 -25479451 +3163 chr4 + 190214555 14767959 14767958 14768046 88 GGAAATTATATTTTCTCTTCCAAAATGTTATTATTACGGATTTATTTGGCTTTGATTAAAGAAAAAATAGGGGGAAAACTGCTATCAG chr4 + 94230402 10613272 10613271 10613359 10613272 10613271 10613359 88 GGAAAGTATTTTTTTTCTTCCAGAATGATTTTTTTCCAGCTGAATTGAGCTCTAGCTAAGACCAGAGCAAGAGGAAAACGGTTGTAAG .....x...x....:.......:....x.x..x..x.:.x.xx...x:...:.:::...::xx.:.::.:.:.......x.:.:.x.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 4154687 NA +3109 chr4 + 190214555 14795757 14795756 14795808 52 TAGAGAAATAAGAATAAAACAAACCCAAACCCAGCAGCAGAAGAAAAATAAC chr4 + 94230402 21541631 21541630 21541682 21541631 21541630 21541682 52 TGGGGAAATAATAATAAAACAAACCAAAATCAAACAACAAAAGAGGAACAAC .:.:.......x.............x...:.x.:..:..:....::..:... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -6745874 -87484528 +3094 chr4 + 190214555 14799660 14799659 14799726 67 TGTCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATTTCTTCCACCGGATACCCTA chr4 + 94230402 59174264 59174263 59174330 59174264 59174263 59174330 67 TATTTCTCAGAAAAAAAAAATGAAACAAAACAAAGAAACAAACAAACAAATCCCACTGGATAATCTA .:.:..x..:..........x:...x....x.......x...x...:xxx.:....:.....x:... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -44374604 -49855798 +3077 chr4 + 190214555 14832624 14832623 14832696 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.xx.x...x::........::.:..xxxx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -61200581 -33029821 +3548 chr4 + 190214555 14834084 14834083 14834158 75 GGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.::.x......:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -61199119 -33031283 +4706 chr4 + 190214555 14836411 14836410 14836571 161 TATATATACATAATATACATATTATATATTATGTATATATATTATGTATATATAATATATTATGTATATTATATAACATATATTATGTGTATA-TTATATATAACGTATATTACGTATTTATAATA-TATAACGTATATTACGTATAT-----------ATAATATATTATGTA chr4 + 94230402 31515513 31515512 31515683 31515513 31515512 31515683 171 TATACACACACCATATACATAGTATATGCTATAGATCTATACTATACATAGATCTTCTAGTAGGTATATTATAGTACATGTAATTAATGAATATTTATACATAA---ATTTTATATAGATATAACACTACGAAAGTTTTTGCGTATATTGTTTGTTAAAATAATACAGTATTTA ....:.:...:x.........x.....::...:x..x....:...::...x..xx.x..x..x..........xx....:..x.xx:..x...-.....:....---..x...::..xx.....:.-..::.x:xx.x..:.......-----------......:.x...x.. 93M1I10M3D19M1I21M11I15M 113/158 71.5% 171/94230402 0.0% 16/158 10.1% -16679102 -77551300 +3439 chr4 + 190214555 14836897 14836896 14836997 101 GTATATATTATATAATGTATAATGTAGATATTATATATTGTATAATGTAGATATTATATATTG------TATAATGTA--GATATCATATAATGTATATATAATATATT chr4 + 94230402 41401133 41401132 41401240 41401133 41401132 41401240 108 GTATACAGTACATAATATATATGTGTGTTACTATATAATGTATAATATAAATAATATGTATTGGTCAGTTATAAGTTAGTGATATCAT-TTTTTTATATTTAACACATT .....:.x..:.....:....xxxxx.x..:......x........:..:...x...:.....------.....xx..--........-.xx.x.....x...:.:... 63M6I9M2I8M1D20M 76/100 76.0% 108/94230402 0.0% 9/100 9.0% -26564236 -67666166 +3710 chr4 + 190214555 14837353 14837352 14837446 94 TATATAATGTATATATAATATATAATGTATATATAATATATAATGTATATATAATATATATAATGCATATATAATATATAATGTATATATAATA chr4 + 94230402 26320252 26320251 26320344 26320252 26320251 26320344 93 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA-GTATATTTTTAGTATTGTATATGTAATA ...x.x.::.:......x..:...x.:......:x.....:...:...x...x..:...x....:-:.....xx.xx:..x.......:..... 65M1D28M 67/93 72.0% 93/94230402 0.0% 1/93 1.1% -11482899 -82747503 +10114 chr4 + 190214555 14867926 14867925 14868179 254 GCAGTTGGT-------CCCATTATC--------CCTTCACCCCAGCTAATTATAGTCACTGATTACCTAACGGCAAGCCCTACTATCACCTGCTTTGGCCTGACA-GATTATGCCATCTGGGCCACGTGGCTAGGGTCTGAGAGCC--ATGAGAGGTCACAGAGAGGGGCAAACGGCTCTGAATGGGAAG---AAATGTGTTTACAGCCCTGACAGCTGACTGGGCAATTAAAGGGGCTTTAGCTGTGTGTTCCCAGCTGAAACCCCTCTCCAGG chr4 + 94230402 79862250 79862249 79862518 79862250 79862249 79862518 269 GCAGCTGGTTGCCTGCCCCATTATCTGAGTGTGCGTCCAGTCTGGCTAATTACAGTCACTGATTACTAAACACTGAGGAGCACTGTCACCTGCCTTAGCCTGACAGGATTATACCATCTGTGCCACATGGCCAGGGTATGGAAAGCTGGTGAAAGGTCACAAAAAGGGGCAAATAGCCCTTAATGGGAGGTACATGTCTGTTTACAGATGTGACAGCTGACT--GTCATTAGGGTAAATATA----TGCATTCACAGCTGAAAATACTTCCCAAG ....:....-------.........--------.x.:..x:.::........:.............:x...:x::..xxx:...:........:..:........-......:.......x.....:....:.....x..::.:x.--:...:........:.:.........::..:..x.......:.---.x:.x.........x:x............--.:x....::.x::x.x..----..::...x.........x:x..::...:. 9M7I9M8I72M1I40M2I42M3I29M2D18M4D29M 185/248 74.6% 269/94230402 0.0% 27/248 10.9% -64994324 -29236078 +4443 chr4 + 190214555 14898952 14898951 14899094 143 GAAAAGAAAGAAAGGAAGGAAGGAAGAAAAGAAGGGAGGGAGGAAAAGAG-AGGGAAGGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAGGAGAGGGAGGGAGGGATGGGAGAAGAGAGGAGAAGGAGAGGAAACTAGGAAAGAG chr4 + 94230402 1500701 1500700 1500844 1500701 1500700 1500844 144 GGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaag .::....:.::..:.:x..::.......:x..:....:.........:.:-...:..:.:..:..x:::..:x..x:x.....:::x.:::..:...:::x..:.x:::.:....:..:.:.x...:.x::..xx:.:...:.. 50M1I93M 83/143 58.0% 144/94230402 0.0% 1/143 0.7% 13398251 NA +3270 chr4 + 190214555 14903777 14903776 14903816 40 CTGTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x:...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -60344272 -33886130 +3467 chr4 + 190214555 14903780 14903779 14903818 39 TCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% -60344270 -33886132 +3102 chr4 + 190214555 14903781 14903780 14903816 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 2302477 NA +3353 chr4 + 190214555 14903781 14903780 14903820 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -60344268 -33886134 +3139 chr4 + 190214555 14903783 14903782 14903822 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -60344266 -33886136 +3316 chr4 + 190214555 14903783 14903782 14903818 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 2302479 NA +3102 chr4 + 190214555 14903785 14903784 14903820 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 2302481 NA +3048 chr4 + 190214555 14909530 14909529 14909597 68 CAACATGCTTTGAGTATATATACACACAAACACATACATACCTATATTTATACACACACACACACACA chr4 + 94230402 23247707 23247706 23247774 23247707 23247706 23247774 68 CAAGATGACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...x...x:....x:..:.:.::.::..x......x:..:xx:....x..:.....:........... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -8338177 -85892225 +3794 chr4 + 190214555 14914496 14914495 14914722 227 GAGCTATATATATAGCTATATATATACTATATATTGAGAGCTATATATACGCTATATAGCTATATA-TATAGCATACATATAGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATAGTATATATACATATATAGCATATATAGTATATATACACGCTATATATAG chr4 + 94230402 71030660 71030659 71030870 71030660 71030659 71030870 211 GAGCTATATCTACAACTATATGTTT------TATTTGGCATT-TATCTTCTGAATGAGGTCATTTACTTTAAAGTAAATACAGAAAATCAGCAT-TAAAAAAGTGCGTGCTGT-----TAAATGATGTTATATGGACATAGGCATATGTTCTTTATAATTTCATGTATTTATA----TAGTATGTATACATATATAAAATATTTACTATCCATCATCACTATATATAG .........x..:.:......:.x.------....x:.x::.-...x.x.xxx..:x:.::..x..-.x..:x:..x...:..x.x..xx:...-..x.x:x:.:::.:..:.-----..x...xxxx....::x.:...x.:....:.x..x...:xx.x:......x....----......:............:x....x..x...x:..xxx.:.......... 25M6D11M1D23M1I27M1D18M5D55M4D51M 137/210 65.2% 211/94230402 0.0% 18/210 8.6% -56116164 -38114238 +5544 chr4 + 190214555 14914566 14914565 14914899 334 GCATACATATAGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATAGTATATATACATATATAGCATAT--ATAGTATATATACACGCTATATATAGCGTATATAGTATATATATACGCTATATATATAGCATATATAGTATATATACATGCTATATATAT------AGCATATATAGTATATATA-----ATATATAGCATATATATTATATATATGCTATATATACCTATATATGATATATAAGCTGTATATATAGATATTATATATATGCTGTGTATATATT chr4 + 94230402 87719208 87719207 87719530 87719208 87719207 87719530 323 GCACGTGGATAGGAGATATGCGGGTAGCTGCGTGTAAATAACATGTGTAAATCTGTATGTACATAGATATGTATATAAACAATATGTAC---TTTCAACATTAATCTAGTTGCAGCTCAGTAAGGACTTTTCAAAAGGAGAAATA-ACCCTGTGTACGTTTTAT----CCTATTTTAATTTCATATCAGTGGCTTTTACaatatatataaataattttcatattttatGTGCatatatattatacatacaagtatatgtaatacatataatatacata---tatatttatctatctataA-AAACAAGCTATGTATGT------------CATGCTGTATGTAAATT ...::::x....x.x....:.:x:..xx..::.:..x.:x.:....:..x..x.:...:......x...........x..x.......:---.x.xx.:..xx..x....xxxx::x..xxx.x::.x.x.--.x..x.x.x...-..x..:.:..::x:x...----:x...x.xx.:x::....xx:.:..x.x..:.:........x..:x.x.x:....------x.........x....:...-----....:..::.:.....x....:...---.....x..:....x...:.-.x.:.....:.:...:.------------:.......:.:..x... 89M3D39M2I12M1D18M4D55M6I19M5I25M3D19M1D17M12D17M 202/310 65.2% 323/94230402 0.0% 37/310 11.9% -72804642 -21425760 +3829 chr4 + 190214555 14922264 14922263 14922425 162 ATATAATATATAATATAAATAATATATATTCTATATAATATATT-ATATATT-ATATATAATATAAATAATATATATTCTATATA-ATATATTATATATTATATATAATATAAATAATATATATTCTATATAATATATAATATATTAT--ATATGATATAAATAATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGT--CATTAATAAAATATTTTCT-TATA-TGTATTCAAATGTTGATATTTAAT-CAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:..:.:.:.--:..x.....x....x....-....-.:....-.x..:..-....x....-:.:x.x.x..x...:::.:..:-.....:..:............x....x.:.......x.x:...:..x:xx...:......x.--:...x:....x:..... 11M2D19M1D4M1D6M1I7M1I9M1D22M1I62M2I17M 114/157 72.6% 162/94230402 0.0% 10/157 6.4% -11397919 -82832483 +3526 chr4 + 190214555 14922350 14922349 14922519 170 TATTATATATTATA-TATAATATAAATAATATATATTCTATATA-ATATATAATATATTATATATGATATAAATAATATATATTCTATATA-ATATATTATATATTATATATAATATATAAAATATATCTTATATAAAATATATAATATAAATATAATGTATAATATATAATA chr4 + 94230402 26320174 26320173 26320344 26320174 26320173 26320344 171 TGTTCTGTAATGTAGTGTGTCATTAATAAAATATTTTCT-TATATGTATTCAAATGTTGATATTTAAT-CAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:..x.:..x.:..-.:.:x:..x.....x....x....-....-:...x:..xxxx.x....x.:..-:.:x.x.x..x...:::.:..:-.....:..:............x......x.......:.xx...:x.x:xx...:....xx.x..:.:.xxx....:..... 14M1I24M1D4M1I23M1D22M1I81M 112/168 66.7% 171/94230402 0.0% 5/168 3.0% -11397824 -82832578 +3176 chr4 + 190214555 14922562 14922561 14922637 76 TATTATATATTAT---ATACTTATATAATATAATATATATTTATATAATATAATATATATTTATATATTATATATTTAT chr4 + 94230402 74182960 74182959 74183038 74182960 74182959 74183038 79 TATAAAATATTGTCCTGTATATACATCACATATTATATAATCATATTATATTGCATATATTTACATGTTCTGTATTTAT ...x.x.....:.---:..:x..:..x.:...x......x.:....x....x::.........:..:..x.:....... 13M3I63M 56/76 73.7% 79/94230402 0.0% 3/76 3.9% -59260398 -34970004 +3872 chr4 + 190214555 14923441 14923440 14923664 224 ATATATAATTATATATCATATAATTATATATATAATTATATATCATATAATTATATATATATAATTAT----ATATCATATAATTATAT----ATCATATAATTATATATAAATATATATAATTATATATCATATAATTATACATATTTATATATAATTATATATCATATAATTATATATAAATATATATAG----TTATATATCATATAATTATATATAAATATATATAGTTATA chr4 + 94230402 53639098 53639097 53639329 53639098 53639097 53639329 232 ATCTATGATAGTTTATGTAGTGCTGATACAGATTAATATAAGTTCTGCAACATGATTTACCTATTAATGATGATGGTGTCCAATTGTATGACTAACATAGATTTCTA---AAATTTATATAATGACTGATCATGTATGTCTACACAGTTGTAGATATGCACACTCTGTATAAATATATATAAATATGCATGGGGTTTTGTGTATCATAC-CTGTCATTTAAATATACAAAGACATA ..x...:..x:.x...xxx:.:x.x...:.x..x.x....x:.:x.::..:xxx..x..:x..x.x..----..:x::.x:....:...----.x....x.x..x..---....x........x.:xx.....:..xx.x....:.x..:..x...xx:.:.:x:::.....x.............::..:.----..:.:.......:-x.xx:..x........:.x..x:... 68M4I17M4I14M3D82M4I13M1D26M 140/220 63.6% 232/94230402 0.0% 16/220 7.3% -38715657 -55514745 +4118 chr4 + 190214555 14923717 14923716 14923825 109 TATAATTATATATAAATATATATATGTATATATAGTTATATATCATATAATTATATATAAATATATAATATATCATATATTATA---TATAAATATATAATA---TATCATATAT chr4 + 94230402 78074627 78074626 78074740 78074627 78074626 78074740 114 TGCAATTGTATACATCCATATGTA-ATTTATATAATTGTATATTGTATGATAGTATATAGATGTATATTATATACTTTACTGTATATTATAAATTTACAATACTGTATAATATAT .::....:....:.xx:....:..-:.x......:..:.....::...:..x:......:..:....x.....xx.x..:.:..---.......x..:....---...x...... 24M1D59M3I15M3I10M 80/108 74.1% 114/94230402 0.0% 7/108 6.5% -63150910 -31079492 +3395 chr4 + 190214555 14932106 14932105 14932149 44 TATATAATATATATATTATATATATATATACACACACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....:.....:...xx............................ 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% -15902087 -78328315 +3273 chr4 + 190214555 14932108 14932107 14932151 44 TATAATATATATATTATATATATATATACACACACACACACATA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....xx....:.................:.............:. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -15902085 -78328317 +4509 chr4 + 190214555 14933612 14933611 14933710 99 TTATAAAAGTGCCAGGTACAGTGGCACACATCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAAGAGGGTCACTTGAGCCCAGAAGTTTGAGGCTATAG chr4 + 94230402 76033181 76033180 76033277 76033181 76033180 76033277 97 TCATGAAAGGATGATACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:....x::x.x::.......::...:.--.....:...........x:........x.xx.x.::x.......:........:..x:....:... 31M2D66M 70/97 72.2% 97/94230402 0.0% 2/97 2.1% -61099569 -33130833 +3251 chr4 + 190214555 14960190 14960189 14960265 76 TGCGTTAAAACTTTAAATATAAAATGTATAAATATATATTTTATATATATACGTATATATACATATACGTATATAT chr4 + 94230402 35359664 35359663 35359739 35359664 35359663 35359739 76 TGCATTATAACACAGAATACAGTCTCTGTAATTTGATATTTTATATATAAACATATGTACACATATATACATACAT ...:...x...x:x:....:.:xx.x.:...x.xx..............x..:...:..:.......:::...:.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -20399474 -73830928 +3390 chr4 + 190214555 14960301 14960300 14960380 80 TTTATATGTGTATATATACATATAAATACATATATAAAATGTATAAAAATATAAAATATAAAATAAATATTTAATTTTTA chr4 + 94230402 91205957 91205956 91206036 91205957 91205956 91206036 80 TTTTTTTGTGTTTATATACGTATACATAGATATGTAATAGATTTGATGATAAAAAATATAAACTATATATATAGTATATA ...x.x.....x.......:....x...x....:...x.x:.x.:.x:...x..........x..x....x..:.x.x.. 80M 59/80 73.8% 80/94230402 0.0% 0/80 0.0% -76245656 -17984746 +3172 chr4 + 190214555 14973360 14973359 14973460 101 TCTCTTTTTCTATTTTTAATTTTGTTAATTTCTACTCTTATCTTTATTATTTCCTTTCTTTTGCCTGCTTTATTTTATTTATTCTT--CTTTTAGTTTCTTGA chr4 + 94230402 37200506 37200505 37200607 37200506 37200505 37200607 102 TCTCTTTGT-TGTTTTTTATTTTTTTAATTTCTACATGTTGATTTTTTGTTGGTTTTGGGTTTCTTGTTTTGTTTTGTTTGTTATTCCCTTTTACATTTCTGA .......x.-.:.....x.....x...........x:x.xxx...x..:..xx:...xxx..x.:..:...:....:...:..x..--......xx..::... 9M1D76M2I15M 71/100 71.0% 102/94230402 0.0% 3/100 3.0% -22227146 -72003256 +3174 chr4 + 190214555 14981160 14981159 14981261 102 AATGTTAAAAATTAGCCAGGCATGGTGGAGTGCACCTAAAGTCCCAGCTACTTGGGAGACTGAAGTAGGAGGATTGCTTGAGCCCAGGAGATCGAGGCTGCA chr4 + 94230402 76033177 76033176 76033276 76033177 76033176 76033276 100 AATGTCATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....:.x:..xx:::x.x:..::....--.....x.:x...:...........::..:....:x:xx.x.:.x::.....:.....:..x.:x:.....:. 28M2D72M 63/100 63.0% 100/94230402 0.0% 2/100 2.0% -61052017 -33178385 +3304 chr4 + 190214555 15002955 15002954 15003148 194 GGATGAGCTGCTTCTGGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAAA---CTCCCCGACCACCACCCCG-GCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCACCCCTCCTCCTCCTCCGCCTCCTCCTGCTGCTGCTGCC chr4 + 94230402 45974580 45974579 45974713 45974580 45974579 45974713 134 ggctgcgcggcgcctggggctg-cgcggcggcgggcgcgg----------GGGCCGCG--CATGGCGAAAGCGCCCTCTGCCTGCGGCTCCGAGCGGCGGGAGGG---------------------------------------------------GCCGCCCTTCCTCCTCCTCCTCCCTCTCCTGCTGCTGCCGCC ..x..x..x..x:.........-.:.:..:..x.......----------....x...--..:..x....---.:.:.:.x.::.x:.:...-.......x.x.:---------------------------------------------------:..:...:............x..::.............:... 22M1D17M10D8M2D10M3I19M1I12M51D42M 99/130 76.2% 134/94230402 0.0% 68/130 52.3% -30971625 -63258777 +4684 chr4 + 190214555 15003364 15003363 15004026 663 CAGCCGCCGCAGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCAGGACTTCGCCCCGCGGCAGCGTCCGGCAGACCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCCCGCGGCGCCGCCACGGAGGCGCGGG----CAGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCCCCCAATGCGGGCTTGGC------CTCCTCGACGC------------------CGGTGAACCCCGCGCCGGGCTCCATGGA-GTCCCCCAACCACCCTCTGCTCAACAGTCCCAGTAACCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGGACCTTCCACACCCGGGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCCGCGTCGCCGCCGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCAGCAGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGCCCGGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGC-CGCCCAGCCCCGACTCAGAGAACGGCTTCTACCCC chr4 + 94230402 52762559 52762558 52763171 52762559 52762558 52763171 613 CAGCCCGCGCACCTGTGCAACTCCCCG-----GCTGCAC--------GCACACCTGTGCAAGCCGCCCGCGCCCGGCAGAAC-GCGTTCGCTCGC----TTTCCCCGCTCGCCCCCCGTAA---------AACGTTACGAAAGCGAATAAAACCAGCCCGACGCAGAGCTCTGCCACCGGCCGCCCCGTCCCCGCTCACCCTCGCTGCCCGGGCTGGCCAGCAGGCTCCGGAGCGCGGCGCACAGCAGCAGGCACGTCCAGCCGGGAGCCGGCCTCCCGGCACGGCCGCCACCGCCCCGCAGCCCCA---TCCCGCGGCCCCTCAGCGCATGGGTCCGGACGGGGCGGGCA-----GGCAGCGCGCCGCGGCT--CCGCTCCGCTCCCGTCCAGCCGC-----CGGCGCGACTGGGGAGCCGGGAGGCGGGGACGGGGGAGGCGGCCCCGTGCCGCCGCCGAGG-----------AGACGCCCCC--GACGGGGCGGACC-CGCCGCTGCCGCCCCGT--------GCGGGAACGGAGCTCTCCGCGACGGGGGGCG------CCTCGGCAGCTGGCCCG---AAAATGGCGGTCCCGCGGGGTGGCTGCGGGT-CCCTGAGGGGCGGCCCCGCGTTTCCCCTCAGCCTCGCGCCCCGCGCGCGCCCCCAGCC------ACGGTTTCGCCCTC .....xx....x.x..x..:.::..:.-----..x....--------...x:x..x:..xxxx..x.x...:........x.-..x::.....x.----:.:..:.x......x..:.:.:---------:x..::...:.:...x:x:----......xxxxx...x.:.x...:.x...x:xxx.:x.x....:x.x:.:.x.x::x......x.x.------....xx::...------------------..x:x.:..xx.x.....x....xx.x.-.x..x...x.xx...x.x..:.x.---....:xx:x..::.x..x.:x:...x..xx:..x......:-----:.....x:..x.x.x.:--x.x:...:.x....xx.:..x..-----.....x.:x:....:...xxx...x..x.:x............:...:.:........xx.-----------x.:.:.....--.x...x..:....-..:...:...:....:x--------..x.xx:.x..x.:xx....::.:.x:.x..------..:.:.....:.x...:---:x.::x..:.:.x.x...xx:.x....x:x:-...:.:.x......xx..xxxx::.x......x:.::...x.-...x.:x....::.:------....:...xx..:. 27M5D7M8D35M1D12M4D22M9D19M4I66M6I11M18I28M1I24M3D41M5D17M2D23M5D61M11D10M2D13M1D17M8D31M6D17M3D31M1D42M1I15M6D14M 358/583 61.4% 613/94230402 0.0% 110/583 18.9% -37759195 -56471207 +4019 chr4 + 190214555 15003860 15003859 15003953 94 AGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCC--GCAGCCGCCCGGCTCGTCTGCCACCACCCC chr4 + 94230402 12250735 12250734 12250830 12250735 12250734 12250830 96 AGCCCCAGCCCCCTCAGCAGCCCCAGCAGCCAGCGCAGCCGCAGCAGCCTCCCCAGCAGCAGCCCTTTGCTCCCCCAGCCGGTCCACCACCACCCC ....x.x...xx.:....x..xx........:x...x:..x........x.......x......--x::x:.x...:..:x...::.......... 64M2I30M 68/94 72.3% 96/94230402 0.0% 2/94 2.1% 2753125 NA +3784 chr4 + 190214555 15018901 15018900 15019004 104 AAGGAAATGGAAGCATTATAAGGCTAAGGGGAATTTTATATATATATATATATATATATATATATATATACACACGCACACACACACGCATATATAGATATATA chr4 + 94230402 61270735 61270734 61270835 61270735 61270734 61270835 101 AGAGAAATGTGGGTTGCAAGAGCTTAAGGCGA---TAACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .::......x::.:xx:.x:..x:.....x..---.x.:.xx:..:x......x.:.......:.......:....:.....x....x...:.....:..:.:. 32M3D69M 69/101 68.3% 101/94230402 0.0% 3/101 3.0% -46251834 -47978568 +3784 chr4 + 190214555 15083895 15083894 15083968 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATCATTTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.xx.x...x..:....:.....:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -60949309 -33281093 +16848 chr4 + 190214555 15093860 15093859 15094093 234 GAGCTTGTTTGGAGGTTCTAG-AGGGAAGCGCAGCTAACTAGTACACCCTTGACCGAAGATTAGTCCC-CCTCTATCGGGGATGGTTGTCCTCTTCAACCAAGTGTGCAGCTTTGGGAGGAAAGCACACGGAGCGGTGAGGGAGGACGGGGACACCCGCCTAGCCAGCCAGATCAGCCAAATCAACCCTGGCAACCAATGGGGCAACAGATGTCACAGCCAGATCGCCCTCACATC chr4 + 94230402 24950307 24950306 24950540 24950307 24950306 24950540 234 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACC--GTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATC .....................-....:..........x.--...:.........:..x..x::..x..-:............x...:.........:......:.........:......:.x.....:...........:.....x..:.......:.................................::.:........::.........:..................... 21M1I17M2D27M1I167M 204/232 87.9% 234/94230402 0.0% 4/232 1.7% -9856447 -84373955 +3942 chr4 + 190214555 15107905 15107904 15107987 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........:.........x.xx.x...x..:..........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -60925292 -33305110 +3187 chr4 + 190214555 15118207 15118206 15118263 57 GAGTGGGAGAAGGACAAAGGGAGAAGGAGAAAGGGAGGAGGAAAAGAGAGAGAGAGA chr4 + 94230402 2605159 2605158 2605215 2605159 2605158 2605215 57 GATTGGAGAAAGGAAAAAGTGAGATGGAGAGAGGGGGGAGGGAAAAAAAAAGAAAAA ..x...:::.....x....x....x.....:....:.....:...:.:.:...:.:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 12513048 NA +3008 chr4 + 190214555 15126678 15126677 15126729 52 AAAAAAAAAGAAAGAGAGAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAGAAA chr4 + 94230402 44890393 44890392 44890444 44890393 44890392 44890444 52 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAA ..::.....:...:.:..............::.....x.x.xx..:...... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -29763715 -64466687 +3051 chr4 + 190214555 15133112 15133111 15133177 66 CTATTATCATTTTCTTTTTTTCTCTTTTCTTTTTTTTTCTTTCTTTTTTTTTTTTTTTCTTTTTGA chr4 + 94230402 84739515 84739514 84739580 84739515 84739514 84739580 66 CTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTTGA ..x......xx..:.:...:....::.x...x::x::...:........x.x......:....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -69606403 -24623999 +3069 chr4 + 190214555 15142104 15142103 15142175 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:..x:xx:.x:..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -60891102 -33339300 +3083 chr4 + 190214555 15160371 15160370 15160438 68 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAGGCTTTTCAAGTCTGACTAGGTCTTTCTGTAGCTACATG chr4 + 94230402 71687603 71687602 71687670 71687603 71687602 71687670 68 AAAAAAAAGAGGAAGAAAAAAAAAAGGAATTATTTTTTTTCCTGACTAATAGTTTCTGTAGTGACATG ........:.::..:...........:..xxx....:xxx:.......:xxx.........:x..... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -56527232 -37703170 +4303 chr4 + 190214555 15162575 15162574 15162778 204 GAAAGAAGGAAAAGATGA--CAGAAGGAAGGAGAAGGAAGGAAGGAAGGAAGGAGAAAGGGAAAGGGAAGGAAAGGAAAAGAAAGGAAAGGAAAGGGAGAAAGAAAGAAGAAAGAAAGGAAAGAAGGAAAGAAAG-----AGAGAGAAAGAAAGAAAGAGAGAAGA--AAGAGAAAGAAAGAAAGAAAGAAA-----AAGAAAGAAAGAAAGCTGCAA chr4 + 94230402 59372544 59372543 59372761 59372544 59372543 59372761 218 GAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAGCCGCAA ....xx:...:..::.:.--.::::.....x.:x.........::.x:xx:::..x..x.:.x.:x:..:.:..::.x..x..x::x..x..::...:x:.:.:::.......:...x:.x.:....:..:.x..-----.:..:.x...x..x...::..:..x.--..x..:......x..x:..:.:x.-----..x..::::.:.....:.... 18M2I115M5I26M2I24M5I21M 122/204 59.8% 218/94230402 0.0% 14/204 6.9% -44209969 -50020433 +3678 chr4 + 190214555 15162677 15162676 15162764 88 AAGAAGAAAGAAAGGAAAGAAGGAAAGAAAGA------------GAGAGAAAGA----AAGAAAGAGAGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAG chr4 + 94230402 15855375 15855374 15855478 15855375 15855374 15855478 104 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAG ....:x.....:..::...x:.:x........------------:..:......----:...:...............:..:.:::x.:.......x:.:.... 32M12I10M4I46M 65/88 73.9% 104/94230402 0.0% 16/88 18.2% -692698 -93537704 +3456 chr4 + 190214555 15171964 15171963 15172066 103 ATGCCAATATAATTTATTCTCTCTTATAGGGAACTTTCTTTTTCCTTGTCTGAAAAGTTTGGGATTTCCTCCTTTTTTTTTTAAGTGGTTTAAAAATTTTTAA chr4 + 94230402 86964364 86964363 86964461 86964364 86964363 86964461 98 ATGCTTATTTAAATTGCT-----TTATAAAGACATTTTTTTTTCCTTATACAAAGAATAAAGGATTTTTTTTTTTTTTTTCCAAAGGGTTTGAGATTTCTGAA ....:x..x...x..::.-----.....::..xx...:.........:.x::..:.:.xx:......::.::........::..:x.....:.:.x..:.x.. 18M5D80M 65/98 66.3% 98/94230402 0.0% 5/98 5.1% -71792400 -22438002 +3216 chr4 + 190214555 15191960 15191959 15192042 83 AGTGGTGGCAGGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAATCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----::.x....:.............::........x.xx.x...x::......:.:..:..x:xx:..:..:.. 7M5D71M 55/78 70.5% 78/94230402 0.0% 5/78 6.4% -60841240 -33389162 +3021 chr4 + 190214555 15208012 15208011 15208134 123 ATGCTTAATACTCACTCTATGCCATGTGACCAGTGTTGTTTTCTCTACACATTGTGCTCATGTGTTTCCTTTTTCATAGAATGTGCTTTCTCTCTATCTTTGTTAATGTCCCACAAATTCCTA chr4 + 94230402 34585583 34585582 34585705 34585583 34585582 34585705 123 ACGATTATTAGTCACTGTCTTTCTCTCCAGCACTGTTTCTTTCTTTGCACGTTTTCCTCATCTTCTTTCCTTTAAATAGAAAGCATTTTCTCCCAGGCACTGCAGCCAAGCCATACATTCCTA .:.x...x..x.....x.x.x:.x:x:x.x..x....x:.....:.:...:..x.x.....x.x:..:.:...xx......x.:::......:.x:x.x:..:x:x::xx...:.x....... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% -19377571 -74852831 +3164 chr4 + 190214555 15215707 15215706 15215765 59 AATAAGATATATATGTATATATATATACACACACACACACACACATATAGATAGATAGA chr4 + 94230402 74671069 74671068 74671127 74671069 74671068 74671127 59 AATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAA ...x..x.:.....:..........:.............x.x.x.x....x..:.x.:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -59455362 -34775040 +3129 chr4 + 190214555 15222230 15222229 15222320 91 CTGACTCTTGCCGGAAACAATGGAAGCCAAAAATTCAGAGTGTGATATCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 72072624 72072623 72072714 72072624 72072623 72072714 91 CTGAGTCCTAATGGAAACAATAGAACCCCAATGAAAAGAGGTTGAAGCCTTTCATTACACACCCAATTCTTTTTTTTTTTTTTTTTTGAAA ....x..:.:x:.........:...x..x..x:xxx....xx...x::....:x..x.x:x:::xx..:....................:. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% -56850394 -37380008 +3672 chr4 + 190214555 15236803 15236802 15236876 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGGTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::...x....x.xx.x...x.............:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -60796401 -33434001 +3165 chr4 + 190214555 15244067 15244066 15244138 72 GCACCTGTAATCCTAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGGAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.:......x..::........x.xx.x...x..........::.:..x:xx:..:..x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -60789139 -33441263 +3553 chr4 + 190214555 15252492 15252491 15252536 45 AATAGAT--TTTCTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 75248041 75248040 75248087 75248041 75248040 75248087 47 AATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ....:..--..:................................... 7M2I38M 43/45 95.6% 47/94230402 0.0% 2/45 4.4% -59995549 -34234853 +3153 chr4 + 190214555 15252498 15252497 15252535 38 TTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248051 75248050 75248088 75248051 75248050 75248088 38 TCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::..................x................ 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -59995553 -34234849 +3002 chr4 + 190214555 15252501 15252500 15252535 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 2651196 NA +3048 chr4 + 190214555 15252501 15252500 15252539 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACCCA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x...............x.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -59995549 -34234853 +3225 chr4 + 190214555 15252502 15252501 15252536 35 CTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 12601304 12601303 12601338 12601304 12601303 12601338 35 CTCTCTCTCTCTCTCTCTCACACACGCACACACAC .........................:......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 2651198 NA +3088 chr4 + 190214555 15292008 15292007 15292068 61 GGGAGGAGGCAAGGGGAGGGGAGGGGAGGGAGGGAGGGAAGAAAGGGAAGGAAGAAGAGAT chr4 + 94230402 32265570 32265569 32265630 32265570 32265569 32265630 61 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGT ..:....:.x..:.:....:....:..........:.:.:....:x:.x:..::..x..:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -16973562 -77256840 +3356 chr4 + 190214555 15315713 15315712 15315840 128 TCTATTTGGGTTGAATTTCATCAGCTTTGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTACTTCTAAAGATGTTTCCTCCAGAAGGAGGAGGCTTGGTGTGAATACAGGAATTTAGTGAA chr4 + 94230402 14848005 14848004 14848116 14848005 14848004 14848116 112 TCTGACTGGGCTGGATAAAAGAGGCTCTAAATTTTTTCTGCTTTTTTTTTTTTTTTTTTCCTCAGCTACTT-----GATA--TCCACCAG--------GGCTAGGTATAAA-GTAGGATTTAGGTGAA ...:x:....:..:..xxx.xx:...:.:..:.....:.x:..................::.:x:......-----...:--...x....--------....x...:.:..-::....x..x:..... 71M5D4M2D8M8D13M1D16M 80/112 71.4% 112/94230402 0.0% 16/112 14.3% 467708 NA +3821 chr4 + 190214555 15321866 15321865 15321947 82 TGTTGTCCCCCTTTTGCAGATGAGGAAACCGGGGCACAGTGATATTAAATAACTTGCCCAAGGTCACACAACTAGTAAGCAC chr4 + 94230402 82283118 82283117 82283199 82283118 82283117 82283199 82 TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAGGAC .:..:.xx:.x...:::.x...:......:...:.....xx.x.....:.:...x:..:...........::....:..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% -66961252 -27269150 +9091 chr4 + 190214555 15350017 15350016 15350285 269 GGAAGGGAGGAAGGGAGGGAGGAAGGAAGGAAAGAAGGGAGGAAGGGAAGAAGGAAGGGAGAGAGGAAGGG-----AGGGAGGGAGAGAGGAAGGGAGGCAGGCAGGCAAGCAGGAAAGAAGGGAGGGAGGGAAGGAGGAAAGAAGGGAGGGAGGGAGCGAAGGAGGGAGGCAGGAAGGAAGGAAGGGAAGAAGGAAGGAAGGGAGGGAAGGAAGGAGGAAAGAAGGGAGGGAGGGAGGGAAGGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAG chr4 + 94230402 1500702 1500701 1500971 1500702 1500701 1500971 270 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatgg--aaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaa--gaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG .....:..:...:..x...:.....:.:x..::.:.:.......:::..x.:.:..:.....:.x:::...-----x.:.:..:.x.:.......:.::::.--.::x..:x.:.......::x:.::.x:....::.:...:.:...:...::....x.:.:.:..:.::x..:..:x:::...:.:.:.::.:......--....:.:....:::::......::xx....::..:..:.::.:.x...::..:.x...:.::.:..:.... 71M5I26M2D97M2D71M 160/265 60.4% 270/94230402 0.0% 9/265 3.4% 13849315 NA +3298 chr4 + 190214555 15350193 15350192 15350354 162 GGAAGGGAAG---AAGGAAGGAAGGGAGGGAAGGAAGGAGGAAAGAAGGGAGGGAGGGAGGGAAGGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGGAAGAAGGAAG--GAAAGGAGGGAAGGGAGGGAAGGAAGGAGGAAAGAAAGGAGGGA--GGGAGGGAGGGAG chr4 + 94230402 890617 890616 890785 890617 890616 890785 169 GAATGGGAAGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG .:.x......---.:x:....:.x.xx...:...::.xx..::x:.xxx.x:.:::..:..x.::.::..........x:...:....:.:x.:.x...::..:..::--.x.:....::.xx:....x:.x.:.....::x:..x:..:..::--...xx.x...... 10M3I95M2I44M2I13M 94/162 58.0% 169/94230402 0.0% 7/162 4.3% 14459576 NA +4416 chr4 + 190214555 15350243 15350242 15350372 130 GAGGGAGGGAAGGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGGAAGAAGGAAGGAAAGGAGG---------------GAAGGGAGGGAAGGAAGGA----GGAAAGAA-------------------------AGGAGGGAGGGAGGGAGGGAGGGAGGAA--GGAAAAAAGAA chr4 + 94230402 1500700 1500699 1500875 1500700 1500699 1500875 176 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaa .:..:..:....:.::.x...:..:..:.:x..:..:.:.:...:..:..:x.:.:.......:---------------..:....:x:.........----.....:..-------------------------....:::.:..:...:..::.:......--........... 64M15I19M4I8M25I28M2I11M 93/130 71.5% 176/94230402 0.0% 46/130 35.4% 13849543 NA +3792 chr4 + 190214555 15350257 15350256 15350367 111 GAGAGGGAGGGAGGAAAGAAGGAAGGAAGGGAA-------GAAGGAAGGAAAGGAGGGAAGGGAGGGAAGGAA--------------GGAGGAAAGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAAA chr4 + 94230402 32265483 32265482 32265614 32265483 32265482 32265614 132 GATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAA ..x.:..:....x.x.:.:..x.x...::...:-------..:.::x.x:.:..:....:xxx:........:--------------...:.:......:...:.::.::.:..........:......... 33M7I33M14I45M 75/111 67.6% 132/94230402 0.0% 21/111 18.9% -16915226 -77315176 +3179 chr4 + 190214555 15350272 15350271 15350366 95 AAGAAGGAAGGAAGGGAAGAAGGAAGGAAAGGAGGGAAGGGAGGGAAGGAAGGAGGAAAGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAA chr4 + 94230402 45854171 45854170 45854265 45854171 45854170 45854265 95 AGGAGAGAATGAAGGGAAAAGAGAAGGAGAAAGCCAACTGGGGGGAGGGTAGAGAATATGAAAGTCCATAGAGCGGGAGAGAAGGGAGAATGAAA .:..::...x........:.::......:.:::xx:.xx..:....:..x..::::x.x.....xxx:x..:.x.....:..:..::...x.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% -30503899 -63726503 +3076 chr4 + 190214555 15356052 15356051 15356109 58 GGTAATGGTTTTTTGTTTGTTTGTTTGTTTGTTTATTTGTTTTTCAGTTTCTTTTTTT chr4 + 94230402 28440294 28440293 28440351 28440294 28440293 28440351 58 GGTGATGGGATTTTATACCTTTGTTTGCTTGTTCATCTATTTTTTATTTTCCCTTTTT ...:....xx....:.x:x........:.....:..:.:.....:.x....::..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -13084242 -81146160 +3044 chr4 + 190214555 15356057 15356056 15356111 55 TGGTTTTTTGTTTGTTTGTTTGTTTGTTTATTTGTTTTTCAGTTTCTTTTTTTTA chr4 + 94230402 25576009 25576008 25576061 25576009 25576008 25576061 53 TGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTT--GTTTTTCTTTTTTA ........x...............x...x:...xx....--....:.:....... 39M2D14M 45/53 84.9% 53/94230402 0.0% 2/53 3.8% -10219952 -84010450 +3126 chr4 + 190214555 15356070 15356069 15356155 86 GTTTGTTTGTTTGTTTATTTGTTTTTCAGTTTCTTTTTTTTATTATTATATTTTAAGTTCTAGGATACATGT-----------------ACAGAACATGCAGG chr4 + 94230402 90070613 90070612 90070715 90070613 90070612 90070715 103 GTTTTTTTGTTTGTTTATTTTTGTTTTGGTTTTTTGTTTTTCCTGTAGAACTTTGAGCCATGGAATAAATTCCTTTCTATTACTCTCAAGCAAAACATGCAGG ....x...............x.x...::....:..x.....x:.:.x:x.:...:..::x.:.:...x..x:-----------------:..:.......... 72M17I14M 61/86 70.9% 103/94230402 0.0% 17/86 19.8% -74714543 -19515859 +3029 chr4 + 190214555 15450498 15450497 15450566 69 CCTTCTTCCT----CTCTTAAAAAAAAAAAAA----AAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 54830705 54830704 54830781 54830705 54830704 54830781 77 CCTTCTTGCTGGGCCTATTAGAAACAAACAAACAAAAAAAAAAAAAACCCACACACTTAAAAAAAGAAAGAAAGAAA .......x..----..x...:...x...x...----.........x..........xx....:..:.:.:..::... 10M4I18M4I41M 55/69 79.7% 77/94230402 0.0% 8/69 11.6% -39380207 -54850195 +3157 chr4 + 190214555 15450501 15450500 15450606 106 TCTTCCTCTCTTAAAAAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 29136816 29136815 29136919 29136816 29136815 29136919 104 TCTGCCTTCCTTAATAAAAACAAAAAAAAAGTGTTCCTGAAAAACAAAACAGATCAGTATGCAAATTAAA--AAAAAAAAAGAAAAAAGATGACAAGTAACGCAAA ...x...::.....x.....x.........:x:x:x.:x.x.x...:..x...xx..x.x:x...xx...--....:.........:.:.x..x...x..x.x... 70M2D34M 71/104 68.3% 104/94230402 0.0% 2/104 1.9% -13686315 -80544087 +3374 chr4 + 190214555 15450513 15450512 15450595 83 AAAAAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 37755113 37755112 37755194 37755113 37755112 37755194 82 AAGGAAAACAAAACAAAACACACACACACACACA-AAATGAAAAAAAAAGCAGAGGAATGAGAACAGAGTAGGAAAAAATGAA ..::....x....x....x.x....x........-...x.....:.....x.:..:..x..:..x.:.:x.::.:....x:.. 34M1D48M 59/82 72.0% 82/94230402 0.0% 1/82 1.2% -22304600 -71925802 +3003 chr4 + 190214555 15450514 15450513 15450576 63 AAAAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 87234402 87234401 87234464 87234402 87234401 87234464 63 AAATACAAAAGAAAAAAAAAACACACACACACAAAAAAGCCCACAACAACAACAAAAAGGAGA ...x.x....:.............x........:.....xxx.x..x.:x..x:.....:.:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -71783888 -22446514 +3204 chr4 + 190214555 15450516 15450515 15450687 172 AAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGTAGCATTTGTATGGACGTTGGGATGGAAGCTTCCCAAGTTCTGGGATGCCGCTTCAGCATCAGAATGGAGA chr4 + 94230402 31232615 31232614 31232776 31232615 31232614 31232776 162 AAAGAATAAATAAATAAATCACTTACAGGTGGGAGTGCTGCAGAAAAAGAAGCAGGCAGTACAGCAAAGACCAAAGGGGAAAAAAAAAAAAAAAAAGCAGGAAGCTTATGGAAGAAAACTGGAATGG----------AGATGTGGGATGAGATATGATTATCTGAGTGGGGA ...:..x...x...x...x...::...x:::.:.:x.xx:x::...:.:...x.::x.:x.x.:x.:.:.xx...:.::..:....:....:...::x.:.x...x.x..x.x.:.x::...:....----------..x.x.......xx::x.x.x:...x..:...:.. 127M10D35M 94/162 58.0% 162/94230402 0.0% 10/162 6.2% -15782099 -78448303 +3061 chr4 + 190214555 15450517 15450516 15450569 53 AAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 5860139 5860138 5860191 5860139 5860138 5860191 53 AAAAAAAGATAGAGAAATCACACACACACACAAAAAAAAGGAAAAAAAAAAGA .......:.x.:.:...x...x........x....:...:.....:....::. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 9590378 NA +3154 chr4 + 190214555 15470650 15470649 15470730 81 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 4618342 4618341 4618419 4618342 4618341 4618419 78 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATAT---AGTATAGATATAT .:.:...:...:x:x.::.x.......::............x.::x...::......x.x.....---x:....x...... 65M3D13M 55/78 70.5% 78/94230402 0.0% 3/78 3.8% 10852308 NA +3368 chr4 + 190214555 15470650 15470649 15470721 72 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATA chr4 + 94230402 4618346 4618345 4618418 4618346 4618345 4618418 73 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ...:...:x:x.::.x.......::..............x:x...::......x.x......-....x..... 62M1I10M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% 10852304 NA +3714 chr4 + 190214555 15470650 15470649 15470734 85 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATATATATATATATATAT chr4 + 94230402 4618348 4618347 4618431 4618348 4618347 4618431 84 TTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT-TATAT .:...:x:x.::.x.......::..............x:....::......x.x......-....x......-.......-..... 60M1I11M1D7M1D5M 66/83 79.5% 84/94230402 0.0% 3/83 3.6% 10852302 NA +3826 chr4 + 190214555 15470650 15470649 15470738 89 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATATCCTA chr4 + 94230402 4618344 4618343 4618430 4618344 4618343 4618430 87 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATATTATA .:...:...:x:x.::.x.......::..............::x...::......x.x......-:....x......-.......:x.. 64M1D12M1D11M 65/87 74.7% 87/94230402 0.0% 2/87 2.3% 10852306 NA +3090 chr4 + 190214555 15470660 15470659 15470730 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.x.x...:.:....:.:.:.:::.:.:x.x..x...:..x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -45360870 -48869532 +3310 chr4 + 190214555 15470662 15470661 15470737 76 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATATCCT chr4 + 94230402 60831530 60831529 60831605 60831530 60831529 60831605 76 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCT ...x.....x.............x.x.x.....:.:....:.:.:.:::.:.:x.x..x...:..x.....:x:.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -45360868 -48869534 +3500 chr4 + 190214555 15470664 15470663 15470734 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x...:..x..... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -45360866 -48869536 +3412 chr4 + 190214555 15470666 15470665 15470734 69 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x..x...:..x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -45360864 -48869538 +3356 chr4 + 190214555 15470668 15470667 15470732 65 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831594 60831530 60831529 60831594 65 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x.x..x...:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -45360862 -48869540 +3142 chr4 + 190214555 15470670 15470669 15470734 65 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831594 60831530 60831529 60831594 65 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT ...x.....x...........x.:.:.......:.:....:.:.:.:::.:.:x.x..x...:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -45360860 -48869542 +3071 chr4 + 190214555 15500075 15500074 15500134 60 TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGT chr4 + 94230402 85834540 85834539 85834599 85834540 85834539 85834599 60 TTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ......x.................:.xx:...:x::...:....:..x...:..:.x.:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -70334465 -23895937 +3076 chr4 + 190214555 15500075 15500074 15500140 66 TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTTTT chr4 + 94230402 85834532 85834531 85834597 85834532 85834531 85834597 66 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ..:.x::.x.....x.................:.xx..:..x::...:....:..x..::..x... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -70334457 -23895945 +3080 chr4 + 190214555 15500075 15500074 15500134 60 TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGT chr4 + 94230402 85834536 85834535 85834595 85834536 85834535 85834595 60 TCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .::.x.....x.................:.xx:.:..x::...:....:..x...:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -70334461 -23895941 +3202 chr4 + 190214555 15500076 15500075 15500135 60 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTA chr4 + 94230402 85834543 85834542 85834602 85834543 85834542 85834602 60 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...x.................:.xx:...:x.:...:....:..x...:..:.x....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -70334467 -23895935 +3041 chr4 + 190214555 15500077 15500076 15500138 62 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTT chr4 + 94230402 79265519 79265518 79265580 79265519 79265518 79265580 62 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .............::........xx...:.:..:...:.::.:.::.:.:::.x.::..... 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% -63765442 -30464960 +3233 chr4 + 190214555 15500078 15500077 15500136 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....x.................:.xx:....x::...:....:..x...:..:.x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -70334463 -23895939 +3125 chr4 + 190214555 15500082 15500081 15500138 57 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTT chr4 + 94230402 85834541 85834540 85834597 85834541 85834540 85834597 57 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT .....x.................:.xx..:..x::...:....:..x...::.:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -70334459 -23895943 +3209 chr4 + 190214555 15510455 15510454 15510538 84 ACATGGTGGCACACACCTGTGGTCCAAGCTACCTGGGAGGCTGAGATGGGAGGATCACTTGAGCCCATGAGGTCGAAGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....::...:--...:..:.x......:..::........x:xx.x.:.x.......:....x:..x.:x::....:.. 15M2D67M 55/82 67.1% 82/94230402 0.0% 2/82 2.4% -60522741 -33707661 +3213 chr4 + 190214555 15590391 15590390 15590444 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x::...........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -60442820 -33787582 +3944 chr4 + 190214555 15635617 15635616 15635695 79 GTGGTGCACGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--....:.:...........:.........x.xx.x...x..........::.:..x:xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -60397584 -33832818 +4039 chr4 + 190214555 15647092 15647091 15647165 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx.x...x.............:..x:xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -60386112 -33844290 +3442 chr4 + 190214555 15647219 15647218 15647287 69 TCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAATGTTGAAAAAAATAAAAATAAACAACAACAACAAA chr4 + 94230402 43175952 43175951 43176020 43175952 43175951 43176020 69 TCTTAAACAAACAAAAAAAAAATTGGAAAGTAAGTCTTTAAAAAAAAAAAAAACAACTAAAACAACAAA ...:...x...x..........xx:.....x..:.x..x.......x.....xx...x.x......... 69M 54/69 78.3% 69/94230402 0.0% 0/69 0.0% -27528733 -66701669 +3000 chr4 + 190214555 15649580 15649579 15649620 41 AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAATAAACAG chr4 + 94230402 44112716 44112715 44112756 44112716 44112715 44112756 41 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAG ....................:...:...:..x....x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -28463136 -65767266 +3442 chr4 + 190214555 15660937 15660936 15661019 83 CATGGTGGCACACGCCTGTAGTACCAGCTACTGGAAAGGCTGAGGCAGGAGAATCACTTAAACCTGAGAGAAGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--......x.........x...........x.xx.x...x.....:....::::..xxxx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -60372260 -33858142 +3451 chr4 + 190214555 15673312 15673311 15673383 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACCAGAGCCCAGAAGGTCGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x:xx.x.:.x...:x..:........x.:x:.....:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -60359894 -33870508 +8172 chr4 + 190214555 15678114 15678113 15678380 267 AACTACTGTGAATTTAAAAATC-----AAACAAAAAACTATGAAGTTGCACATACTTTTAACTTATGGGACAAGTCATTATTCATAGG--TGTTAAGTCTCAAAACAGGCAGGATTGCCTGGATTTTCTCATTTGCAATTTTATCTTTCAATCTAACAAGAATGGCTTCATTAATTTT-TTACACAAAACATTATTAATCTAGGCATTTTCTGGCTTATTTCCCAATAACTTACTCAGAATTTGGCACATCAAAAACTT-----CATTGCTGTTTACCTC chr4 + 94230402 78790108 78790107 78790384 78790108 78790107 78790384 277 AACTAACGTAAGTCAACGAACCTTTTTAAACAAAAGAAAAT-AAGTACTACTTACTGTTAACA-ACAGGACA-GTTTTCATCCTTAGGATCTTGAAGCCTTGACAGGGCCAAAACAGCTTGAATTCTCACATTTGAAAACTTATCTTTAAGTCTAATCAGCATAGCTTCATTAATTTTATCAAATAATTCATCATCAATCTGAGCATTCTCTGGCATGTTCCCCAAAATCTTATTAACAAGCTGGCATGTTCGAAACCTAACCGCATGGCTGTTTGCATC .....x:..:.:.:x.x:..:.-----........:.xx..-....xx:..x....x.....x-.::.....-..:x.:..:.x....--:x.x...:..::.x.x:.x..::.:x..:..:...:..x......x..x:........x.:.....:x..x..:..............-.:.x.:..xx...:..:.....::.....:......x.:..:.....x.x....:.x.x..x:.....::.:x:....:.-----...x.......:.x.. 22M5I14M1D21M1D8M1D15M2I88M1I80M5I16M 183/264 69.3% 277/94230402 0.0% 16/264 6.1% -63111994 -31118408 +3062 chr4 + 190214555 15697855 15697854 15697933 79 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCATGAATCCAGGAGGCAGGGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--......:...........::........x.xx.x...xx:.x....:....:..x:xx..x:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -60335346 -33895056 +3116 chr4 + 190214555 15707835 15707834 15707898 64 CTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATAT chr4 + 94230402 60831537 60831536 60831600 60831537 60831536 60831600 64 CTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ..x.............x.x.x.....:.:....:.:.:.::....:x.x..x.:....x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -45123702 -49106700 +3338 chr4 + 190214555 15707835 15707834 15707916 82 CTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATATA-----------CATATCTATACATATCT chr4 + 94230402 60831535 60831534 60831627 60831535 60831534 60831627 93 CTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT ....x.............x.x.......:.:....:.:.:..:..:.:x.x..x.:.:..x....-----------...:.x.:..:..x... 65M11I17M 60/82 73.2% 93/94230402 0.0% 11/82 13.4% -45123700 -49106702 +3688 chr4 + 190214555 15707835 15707834 15707924 90 CTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATATACATA---TCTATACATATCTATATCTAT chr4 + 94230402 60831531 60831530 60831623 60831531 60831530 60831623 93 CTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ..x.....x.............:.:.......:.:....:.....:::.:.:x:x:.x...:..x:...---...:.:.::..x.:.:.x... 69M3I21M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% -45123696 -49106706 +3441 chr4 + 190214555 15707836 15707835 15707904 69 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATATACATAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x...........x.:.:.......:.:........:.:::.:..x:x..x...:.:x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -45123694 -49106708 +3453 chr4 + 190214555 15707836 15707835 15707902 67 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATATACAT chr4 + 94230402 60831534 60831533 60831600 60831534 60831533 60831600 67 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT .....x.............x.:.......:.:....:.:....::.:.:x.x:.x...:..x..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -45123698 -49106704 +3457 chr4 + 190214555 15707838 15707837 15707908 71 TCTCTCTCTCTCTCTCTCTATATATATATATATATATACACATATATATACACATATATATACATATCTAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.........x.x.:.:.......:.:..:...:.:.:::....x.x..x......x.x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -45123692 -49106710 +3032 chr4 + 190214555 15713184 15713183 15713227 44 TCATTATTTTAAATATTTTCATCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72504684 72504683 72504727 72504684 72504683 72504727 44 TCACTGTATTAAATATTTTCCTCTATTTTTTTTTTCTTTTTTTT ...:.:.x............x...x..........:........ 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -56791500 -37438902 +3201 chr4 + 190214555 15718239 15718238 15718292 54 AGAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATACACACACACACAG chr4 + 94230402 15641916 15641915 15641969 15641916 15641915 15641969 54 AGAAAAATGCGTGTATGTGTGTGTGTCTATGTCTGTGTCCACAGGCATATATAG ...:..:..:....:...........x.:.........x:...x:..:.:.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 76323 NA +3091 chr4 + 190214555 15718247 15718246 15718286 40 GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATACACACAC chr4 + 94230402 79265519 79265518 79265558 79265519 79265518 79265558 40 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACAC .............::........x....:......:.... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -63547272 -30683130 +3514 chr4 + 190214555 15720653 15720652 15720794 142 CAGTGGCATGCACCTGTAGTTCCAGCTATTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTCAAGG-----GAACAGTGAGCTATGATGGTGCCACTGCACTCT-AGCCTG----------GGTGACAGAGCAGGACCTGGTCTCAAAA chr4 + 94230402 76033199 76033198 76033350 76033199 76033198 76033350 152 CAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG----TGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAA ......--.....x..............:...::........x:xx.x.:.x::.....:.....:..:.:x:..-----.....xx:x..:.x.xx.:..----..::.:..-......----------......x.x:x..::.:...xx...x.. 6M2D67M5I21M4D8M1I6M10I28M 95/136 69.9% 152/94230402 0.0% 22/136 16.2% -60312546 -33917856 +3204 chr4 + 190214555 15720824 15720823 15720860 37 CCCTCAAAAACAAACAAACAAACAACAACAACAAAAA chr4 + 94230402 81996040 81996039 81996076 81996040 81996039 81996076 37 CTCTTAAAAACAAACAAACAAACAACAACAACAAAAA .:..:................................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -66275216 -27955186 +3041 chr4 + 190214555 15720829 15720828 15720863 35 AAAAACAAACAAACAAACAACAACAACAAAAAGCT chr4 + 94230402 17225739 17225738 17225773 17225739 17225738 17225773 35 AAAAACAAACAAACAAACAACAACAACAAAAACCT ................................x.. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -1504910 -92725492 +3608 chr4 + 190214555 15724550 15724549 15724628 79 GTGGTGCGTGCCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGTAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--....:::...........::........x.xx.x...x.............x..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -60308651 -33921751 +3057 chr4 + 190214555 15773795 15773794 15773846 52 TCAAACAAAACAAAACAAAACAAAAACAAACAAACAAAAACCAAAAACAAAA chr4 + 94230402 37643084 37643083 37643135 37643084 37643083 37643135 52 TCCAGAAAAGCAAAACAAAGTAAAAACAAACAAACAAAAAACAAACTGAAAA ..x.:x...:.........::...................x....xxx.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -21869289 -72361113 +3014 chr4 + 190214555 15780530 15780529 15780581 52 ACACACACACACACACACACACACACACACACACACACATACAGTCTTACAG chr4 + 94230402 46140856 46140855 46140907 46140856 46140855 46140907 52 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAG .:.:.:.:........x.x....:........::::.:......x....... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -30360326 -63870076 +3088 chr4 + 190214555 15802491 15802490 15802575 85 GTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTCACTTCATTTCATTTTATTTT chr4 + 94230402 38221225 38221224 38221309 38221225 38221224 38221309 85 GCTTTATTTTATTTTACTCTATTTTACGGTGGTTGGTTTATTTGTTTCCTCTCTCCTTTCGTTTCGTTCCCTCTCGTTGTGTTTT .:..............:.:.......:xx.:x..x:...xx..x.x.::.x.:.:x...::....::.:.x.:..:..x.:.... 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -22418734 -71811668 +3190 chr4 + 190214555 15814767 15814766 15814822 56 TTCTGAGGTCTCTGTTCTGTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTT chr4 + 94230402 16364274 16364273 16364329 16364274 16364273 16364329 56 TTTTGTTGTCTCTGGGGTGTTTGTGTTTTTTGTTGTTTTTTGTTTGTTTTTTTTTT ..:..xx.......xxx.....x...........x...x..x.............. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% -549507 -93680895 +3073 chr4 + 190214555 15850165 15850164 15850241 77 GTTGTGCACCTGTAGTCCCAGCTACTCTGGAGACTGAGGTGGGAGGATTGTTTGAGCTTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......x......:.........:x::..:.....x:xx.x.:.x:::....:.:::.:..x..x:.....:.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% -60183036 -34047366 +3324 chr4 + 190214555 15854183 15854182 15854265 83 CATGGTGGCATGTTCCTGTAGTCCCAACTACTTGAGAGGCTGAGGTGAGAGGATTGCTTGAGCCCAGGAGATCAAGGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..:x.x......:...:........:........x:xx.x.:.x::.....:.....:..x.:x:....::.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -60179014 -34051388 +3091 chr4 + 190214555 15858846 15858845 15858924 79 GCAGTGCAGGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTCAAACCTGAGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....x.--......:...........::........x.xx.x...x....::....::::..x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -60174355 -34056047 +3464 chr4 + 190214555 15862770 15862769 15862854 85 AGCTTTTTTGTGCTTCACTTTTCTCATCTGTAAAATGGGAATTACAGCAGTAACTTCCTTTGCTGGGTTGCTGTGAGGGCTGAAT chr4 + 94230402 83501160 83501159 83501243 83501160 83501159 83501243 84 AACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA-GGCTAAAT .:.:.x.x.....:...x.....:..:...........::x.x.:..:.:.x..:.x.:.::.x...x.::.....-....:... 76M1D8M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% -67638390 -26592012 +3045 chr4 + 190214555 15887862 15887861 15887953 92 TCTTCATCAAACTCTTCCCCAAACTGAGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTG chr4 + 94230402 91505147 91505146 91505238 91505147 91505146 91505238 92 TCTTACTCAAGCTTAATCTGAAACTGCATTTTACAGGATCTCATCTTCTTTTGTTTTTTAGAGTTTTGGGTTTTTTTGTTTTTTTTTTTTTG ....xx....:..:xx:.:x......x:....::xxx:.:.::.:..x.........x.xxx......xx..x.........x....x.... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% -75617285 -18613117 +3443 chr4 + 190214555 15889723 15889722 15889792 70 CGTGGTGGCACATGCTTGTAATCCCAGCTACTCGAGAGGCTGAGTCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....::..:.--....:.:.........:..:........:.xx.x...x::...........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -60143474 -34086928 +3135 chr4 + 190214555 15892298 15892297 15892358 61 AAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACATATATATACATA chr4 + 94230402 74671057 74671056 74671117 74671057 74671056 74671117 61 AGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA .:..x.x.x.....x..xx.:............................:.x.x.x.x... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -58778759 -35451643 +3703 chr4 + 190214555 15892300 15892299 15892434 135 AAAAAAAAAAAAATATATATATATATATATATATACACACACACACATATATATACATATATATACACACATATATATATATATATA--TATG----TGTGTATATATATATGAATATCTGTCCAGACTCTTTTAAAGCTT chr4 + 94230402 21109175 21109174 21109315 21109175 21109174 21109315 141 AAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTT .....x..::....x.::x....:..:.:.:.x.x::::x:.::.:x.....:...x:.:......x.:::..:x....::...:..--:...----.........:.:.........x::.x..x..xxxx...x..:.. 87M2I4M4I44M 85/135 63.0% 141/94230402 0.0% 6/135 4.4% -5216875 -89013527 +3081 chr4 + 190214555 15892307 15892306 15892425 119 AAAAAATATATATATATATATATATATACACACACACACATATATATACATATATATACACACATATATATATATA-----------TATATATGTGTGTATATATATATGAATATCTGTCCAGACTCTT chr4 + 94230402 54005687 54005686 54005816 54005687 54005686 54005816 130 AACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTAATTCTGACAAAGCTGTT ..x.x....:...x........:...:...........x.x..x.:.x.xxx.::.:.x.x.xx..:....:....-----------....:.....:xx:.x.:.:.:.xx.xx....x.x.::..x.. 76M11I43M 78/119 65.5% 130/94230402 0.0% 11/119 9.2% -38113380 -56117022 +3253 chr4 + 190214555 15892309 15892308 15892415 107 AAAATATATATATATATATATATATACACACACACACATATATATACATATATATACACACATATATATATATATATATATGTG-TGTATATATATATGAATATCTGT chr4 + 94230402 54005687 54005686 54005794 54005687 54005686 54005794 108 AACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGT ..x.:....:...x........:...............x.x..x.::x:xxx.::...x.x.xx..:....:....x:...xx.-.x....:..:.::x.:.x.x... 84M1I23M 71/107 66.4% 108/94230402 0.0% 1/107 0.9% -38113378 -56117024 +3074 chr4 + 190214555 15892311 15892310 15892406 96 AATATATATATATATATATATATACACACACACACATATATATACATATATATACACACATATATATATATATATATATGTGTG-TATATATATATG chr4 + 94230402 54005687 54005686 54005783 54005687 54005686 54005783 97 AACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTG ..:.:....:...x........:.:...........:.x.x..x::.x:xxx.:....x.x.xx..:....:....x:.:.xx.-.x....:..:.. 84M1I12M 64/96 66.7% 97/94230402 0.0% 1/96 1.0% -38113376 -56117026 +3010 chr4 + 190214555 15892324 15892323 15892374 51 ATATATATATACACACACACACATATATATACATATATATACACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:......x.x......:.:.:..:.:........x..x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -30248532 -63981870 +3104 chr4 + 190214555 15896185 15896184 15896341 157 AAGAAAACTATTTCCTTTAAT-----TTTT-----TTTCTCCTTTTATTA-------TGTCTCCTTTTCTC-CCCCATGCCCTTCATTTTTC-------------------TTTTCTTTTCTCTTTTTTCTTTTCTTCCTTCTTTTTTTCTTCGTTGCCCCTCTCCCTTCCTCTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 33237556 33237555 33237745 33237556 33237555 33237745 190 AAAAGTGCTGCTTCCATTAGTGAGGGTTTTATCCGTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCA----CTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCT ..:.:x:..::....x...:.-----....-----.:........:x::.-------......xx.....x-:..::.x:.::....:.:..-------------------..:..:...x.....xx...x......:x:...x...:....:----.::.:..x.....::..:.....:.x:.:.:x.... 21M5I4M5I15M7I14M1I20M19I43M4D36M 103/153 67.3% 190/94230402 0.0% 41/153 26.8% -17341371 -76889031 +3138 chr4 + 190214555 15896200 15896199 15896299 100 TTTAATTTTTTTTCTCCTTTTATTATGTCTCCTTTTCTCCCCCATGCCCTTCATTTTTCTTTTCTTTTCTCTTTTTTCTTTTCTTCCTTCTTTTTTTCTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...xx.:......::.::x..x..x.:.:..xx.:.:.x:.:::x...:..xx......x:xx::.......::::.........:....:.....x:.. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% -47800940 -46429462 +4459 chr4 + 190214555 15896204 15896203 15896344 141 ATTTTTTTTCTC-CTTTTATTATGTCTCCTTTTCTCCCCCATGCCCTTCATTTTTCTTTTCTTTTCTCTTTTTTCTTTTCTTCCTTCTTTTTTTCTTCGTTGCCCCTCTCCC----TTCCTCTCTCTTTCTTTCTTTCTTTCTTCA chr4 + 94230402 50176265 50176264 50176409 50176265 50176264 50176409 145 ATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTT-CTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCA .....:.x....-..x:.x.:x.x...:.:...x...x..xxx:::.x....x......-..x....:.x.x...x...:.x:.......:.......:xx:...x:.....----...:.x....:......::..::.:..:.. 12M1I46M1D52M4I30M 96/140 68.6% 145/94230402 0.0% 6/140 4.3% -34280061 -59950341 +3177 chr4 + 190214555 15900541 15900540 15900611 71 CTGGTTGCTTCCTTCTTTTTTCTCTTTTTCTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTAGACAGGATT chr4 + 94230402 72001421 72001420 72001491 72001421 72001420 72001491 71 CTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACT ...::...:.:.:::.:.x:..:..x...:.:.....:.:.............:.::..:..x.x..x.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -56100880 -38129522 +3036 chr4 + 190214555 15900546 15900545 15900593 48 TGCTTCCTTCTTTTTTCTCTTTTTCTCTTTCTTTTTCTTTTTTTTTTT chr4 + 94230402 68431720 68431719 68431767 68431720 68431719 68431767 48 TGCTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTTT .....:..:..::...:.x..x.....:.:......:........... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -52531174 -41699228 +3068 chr4 + 190214555 15900567 15900566 15900623 57 TTTCTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTAGACAGGATTTTCTTCTGTGGC chr4 + 94230402 43275302 43275301 43275358 43275302 43275301 43275358 57 TTCTTCTTTTTTTTTCTTTTTTTCTTTTTCTGTCAGGATAATATTCTCTTCTCTAGC ..::.....:.............:.....:.x.:x:..:.:x...:......x.:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -27374735 -66855667 +3345 chr4 + 190214555 15920135 15920134 15920193 59 AAAAGAAAAAAAGAAAAGAAAGAAAGAAAAGAAAAGAGACAAAATGGCAGAGTCTGACC chr4 + 94230402 66158979 66158978 66159035 66158979 66158978 66159035 57 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAA--ATAGAGGCTGACC ...:...............:...:...:.:....x...:..:..--::....x...... 44M2D13M 46/57 80.7% 57/94230402 0.0% 2/57 3.5% -50238844 -43991558 +3467 chr4 + 190214555 15923335 15923334 15923402 68 GGCTAATTTCTGTGTGTGTGTGTGTGTGTGTGTATATATATTTTGTTTGTTTGTTTGT-TTGTTTGTTT chr4 + 94230402 33250993 33250992 33251061 33250993 33250992 33251061 69 GGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..:.xx...:.............:.:.:............xxx.x...........x.-..:...x... 58M1I10M 54/68 79.4% 69/94230402 0.0% 1/68 1.5% -17327658 -76902744 +3351 chr4 + 190214555 15949730 15949729 15949807 78 GTGGTGGGCACCTGTATTCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGACAGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......--...x....x.:........x..::........x.xx.x...x.:...........:..x:xx:..:..:. 6M2D70M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% -60083471 -34146931 +3580 chr4 + 190214555 15974048 15974047 15974114 67 AGAGCTAGAAAGAGTAAGTTTACACACACACATACAGACACACACACACAGACACACACACTCTCTC chr4 + 94230402 4409062 4409061 4409128 4409062 4409061 4409128 67 AAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACATTTTCCC .:.....:.:...x.:..x:.::...:.:.:...:.x.:.........x...........:.:..:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 11564986 NA +3461 chr4 + 190214555 15980540 15980539 15980654 115 AGGAAAAAAAAATCAGAAGAATTAAATGTTTGAAGATAAGAAATGGGAAAAACA-----GTTGTTTGGGGGATTTTTTTTTTTTTTTTTTTTTTTTGGAATTTTTAAAAATGAGTTGTCA chr4 + 94230402 33768168 33768167 33768287 33768168 33768167 33768287 120 AGAAGGGAAGTACCTGATTTATTAGATACATGTGCATAAAGAATGCACACAATATATCTATTGGTTGGGGTTTTTTTTGTTTTTGTTTTTTTTTTCCAAATTTTGAGAAAAAGGTTATCA ..:.:::..:x.:.x..xxx....:..::x..x:x....::....x:x.x..:.-----:...x......xx......x.....x..........:x:......x.:...x::...:... 54M5I61M 75/115 65.2% 120/94230402 0.0% 5/115 4.3% -17787628 -76442774 +3540 chr4 + 190214555 15995253 15995252 15995488 236 CTTGGAGGTTTGGAGGATGGAATGGGAACAAGGAGACCAGTTGGAAGGAGAGAGAGAGAGAGAAAAAGAAGA-AGAAGACGAAGAAGACGAAGAAGAAGAAGGAGGAGGAGGAGGAAAAGAAGAAGAAAAAGAAGAAAAAGGAGGAGGAGGAGGAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGATTTAAGAAAGATTTAGAAGACAAAGCCTACGAGTAACATTTATAAGT chr4 + 94230402 91771658 91771657 91771885 91771658 91771657 91771885 228 CTCTGGGGTTTTAGGAGTAATATGAATTTCAGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATG-------CACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATA--TAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGT ..:x.:.....x::.::.::x...::xx:x.....:.x.:x......:.x.:x..:::x.:...::x.xx..-....:.:.-------.:x..:.:x..x....:x.....:::.x.:xxx:x:..x...x.:..:...:::x:..x.....x:..x.:.::.x......:...xx.........:.x:--.x::.:..:.xxx:...:.:.x.x::..x......x.xxx..:... 72M1I8M7D101M2D46M 127/227 55.9% 228/94230402 0.0% 10/227 4.4% -75776405 -18453997 +4278 chr4 + 190214555 15995282 15995281 15995459 178 AAGGAGACCAGTTGGAAGGAGAGAGAGAGAGAGAAAAAGAAGAAGAAGACGAAGAAGACGAAGAAGAAGAAGGAGGAGGAGGAGGAAAAGAAGAAGAAAAAGAAGAAAAAGG----AGGAGGAGGAGGAGAAGAAGAGG--AGGAGGAAGAGG--AAGAAGAAGAAGATTTAAGAAAGATTTAGAA chr4 + 94230402 84536554 84536553 84536732 84536554 84536553 84536732 179 AATGAGGCC--TTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATT-----AAAATTTACAA ..x...:..--...xx.:.:..:..:..:...:.....x..x..:..x.x....x::.x:..:...:::....::.....:..:.xx.x.x..x.:..xx..x..xx:...x----.:...:.:..x:.:x.....:.:--:..........:--......:x:..:...-----..:.....x.. 9M2D101M4I23M2I12M2I15M5D11M 113/171 66.1% 179/94230402 0.0% 15/171 8.8% -68541272 -25689130 +4662 chr4 + 190214555 15995323 15995322 15995465 143 GAAGAAGACGAAGAAGACGAAGAAGAAGAAGGAGGAGGAGGAGGAAAAGAAGAAGAAAAAGAAGAAAAAGGAGGAGGAGGAGGAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGATTTAAGAAAGATTTAGAAGACAAA chr4 + 94230402 1500700 1500699 1500839 1500700 1500699 1500839 140 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaag---aaaatggaaatagaagaggaa .::.....x:.::...::.::.:::.::.:x....:.:..........:..x.:.....:..::..x.:..:.x::x.x....:...x..::.:....::.x.:::..:..:.....::---..:.x:..xx.......x:.. 119M3D21M 85/140 60.7% 140/94230402 0.0% 3/140 2.1% 14494623 NA +3267 chr4 + 190214555 16004840 16004839 16004900 61 CCTTCCTTCCTTCCTTCCTTCCTCTCTCTCTCCCTCTCTCTCTCTCTCCCTCCCCCTCTCT chr4 + 94230402 12085018 12085017 12085078 12085018 12085017 12085078 61 CCCCACTTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACT ..::x........:x.:x..:.x..::.....:...:....:........:..:....x.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 3919822 NA +3401 chr4 + 190214555 16004892 16004891 16004998 107 CCCCTCTCTCT---CTCCCTTCCTTCCTTCCTTCCTTCCTTCCTCTTTCTTTTTTTCTTTATTTCTCGCTCTCTCTTTTTTTTTTTTTTTTTTGACAGAGTCTCACTCTG chr4 + 94230402 61949700 61949699 61949806 61949700 61949699 61949806 107 CCCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCT---TTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTG ...:.:...:.---...:x:.x..x:x:.....:.x.x..:.x..:..x..:...:.xx..:....---.:...:.:...:............::::..x.:.:...:.. 11M3I52M3D41M 69/104 66.3% 107/94230402 0.0% 6/104 5.8% -45944808 -48285594 +3164 chr4 + 190214555 16011963 16011962 16012022 60 ATAGCTT-CAGAGATTTCTTT-------TCTTTTCTGTTCTTTTTTGTTTGTTTGTTTTTGTTTTTTT chr4 + 94230402 21380762 21380761 21380829 21380762 21380761 21380829 68 ATAGCTTACTGATATTTTTTAAGCATTATGTTTTCTGTTTTTTTTTATTTGTTTGCTTTTGTTTTTTT .......-.x..x....:..x-------.x.........:......:........:............ 7M1I13M7I40M 52/60 86.7% 68/94230402 0.0% 8/60 13.3% -5368799 -88861603 +3304 chr4 + 190214555 16020652 16020651 16020707 56 AAGAACCACCACCACCACCACCAACAACAACAGAGAATGACAGGTGATAAAATAAA chr4 + 94230402 42911780 42911779 42911835 42911780 42911779 42911835 56 AAAAACCACCACCACCACCACCAACAACAACAACAAAAAACAAAAAACAAACCAAA ..:.............................:x:..x:...::x:.:...x:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -26891128 -67339274 +3585 chr4 + 190214555 16039598 16039597 16039680 83 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGATGGGAGGATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:...........::........x:xx.x.:.x...........:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -59993599 -34236803 +3538 chr4 + 190214555 16054569 16054568 16054634 66 GCAAATTATTTAAATTCCCTGGGCCTCAATTTTCTCATCTGTAAAATGAAGGTAATAATACTCATC chr4 + 94230402 83501149 83501148 83501214 83501149 83501148 83501214 66 GCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACC ........:....x:.x:x..x......:.....:..:..........:..x.:...:..x.:.:. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -67446580 -26783822 +3847 chr4 + 190214555 16080386 16080385 16080497 112 GTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGACCTGAGATCATGCCACTGCACTCC---AGCCTG chr4 + 94230402 76033201 76033200 76033312 76033201 76033200 76033312 112 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG .........:--......:.........:.::........x.xx.x...x...........:.:..x:xx:..:..:..-:..x...x::..x..x:x..:::x..---...... 10M2D67M1D26M3I6M 77/109 70.6% 112/94230402 0.0% 6/109 5.5% -59952815 -34277587 +3264 chr4 + 190214555 16110314 16110313 16110409 96 AAGGAGGAAGGAGGGAGGGAGGGAGGGAGGAAGGAAGAAAGGAAGGGAAAGGAAAGGAGGGAAATAAAAGTGAGACATACATTAACACACAAAGAA chr4 + 94230402 31357956 31357955 31358040 31357956 31357955 31358040 85 AGGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAG---AAGGGAAACATGAGAGTG---CATATATG-----ACAAAGAA .:..:....:.x.:....:.........:..:.x.....::.xx.......---.:.:.::.x..:.:....---....:..x-----........ 51M3D18M3D8M5D8M 63/85 74.1% 85/94230402 0.0% 11/85 12.9% -15247642 -78982760 +3702 chr4 + 190214555 16112584 16112583 16112751 168 AGCAGGAAAATGGGGAAGAAGGAAG--------GAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGGGAGGG--TGGAGGGGAGGGTGGAGGAGAGGGGAGGAGGGAGGGGAGGAGGGAGGGGAGGGGAGGGAGGGAAGAAGGGAGGGGAGGGAGGGAAGAAGGGAGGG chr4 + 94230402 82677993 82677992 82678168 82677993 82677992 82678168 176 AACTGGAAGAGGAGGAA--AGGCAGCGTCAGTCGGGGGCAGCCGGGAGAGGAGACGGGGAGCGGTGGAGGAGAGAGGATGAACCGCAGCAGTGGGGAGGAGTGCGAGGAGAAACGAAGGGGACAGAGAAGGGAGCGGACGGACACGAGGGGACTACAGAGAGCCGGGAGAAAGGAGAG .:.x....:.x.:....--...x..--------.::..x..xx:..:::....:x:.....x.:x.....:...:...x.:--:.x..x:.x...x:.::.x.x.:....:.:x..:...::x..:..:.....x...x...x:x:..::.:xx:x:...:.xx..:....:....:. 17M2D6M8I48M2I95M 100/166 60.2% 176/94230402 0.0% 12/166 7.2% -66565409 -27664993 +4310 chr4 + 190214555 16112604 16112603 16112772 169 GGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGGGAGGGTGGAGGGGAGGGTGGAGGAGAGGGGAGGAG-------GGAGGGGAGGAGGGAGGGGAGGGGAGGGAGGGA---AGAAGGGAGGGGAGGGAGGGAAGAAGGGAGGGGAGGGAGGGAAGAAGGGAGGG chr4 + 94230402 82677997 82677996 82678168 82677997 82677996 82678168 172 GGAAG--AGGAGGAAAGGCAGCGTCAGTCGGGGGCAGCCGGGAGAGGAGACGG-----GGAGCGGTGGAGGAGAGAGGATGAACCGCAGCAGTGGGGAGGAGTGCGAGGAGAAACGAAGGGGACAGAGAAGGGAGCGGACGGACACGAGGGGACTACAGAGAGCCGGGAGAAAGGAGAG .....--....:.:....x..x.xx:.xx..:..x..xx:..:....:..x..-----..::x............:...x..:-------:.x.........x.x.:....:::x.:::....---.........x...x...x:x:..::.:xx:x:...:.xx..:....:....:. 5M2D46M5D25M7I33M3I53M 107/162 66.0% 172/94230402 0.0% 17/162 10.5% -66565393 -27665009 +4214 chr4 + 190214555 16112663 16112662 16112802 140 GGAGGGTGGAG---GAGAGGGGAGGAGGGAGGGGAGGAGGGAGGGGAG------GGGAGGGAGGGAAGAAGGGAGGGGAGGGAGGGAAGAAGGGAGGGGAG-GGAGGGAAGAAGGGAGGGGAGGG---AGGGAGGGAGGGAGGAAAGGAACAG chr4 + 94230402 32265469 32265468 32265620 32265469 32265468 32265620 152 GGAGGGTGGTGCTGGATAAGGGGGGATGCAGGG-AGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAG .........x.---..x.:...:...x.x....-..x.x....:....------x.::.:.x.x..:.::.....xxx:....:...::.x.x:x.x.x..-...:.......::...:....:.---.........:.:......:x..:.. 11M3I19M1D14M6I47M1I23M3I25M 98/139 70.5% 152/94230402 0.0% 14/139 10.1% -16152806 -78077596 +3087 chr4 + 190214555 16146648 16146647 16146717 70 CATGGTGGCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--.::.x......:...........::........x.xx.x...xx:.x.........:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -59886549 -34343853 +3013 chr4 + 190214555 16155150 16155149 16155222 73 TGTGCCTGTAGTCCCAGCTACTTGATAGGCTGAGGAAGGAGAATTGCTTGAACGCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:............x........xxxx.x...x::.......x.:.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -59878055 -34352347 +3088 chr4 + 190214555 16179766 16179765 16179833 68 AAATGTCTATAAATATACAACTTTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325489 27325488 27325556 27325489 27325488 27325556 68 AAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .....:x...:.x.:..:.xx::.:x.:x..x....:.........:.........::..::...... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -11145723 -83084679 +3335 chr4 + 190214555 16196669 16196668 16196729 61 CCTGTGCCACCACATTCCATTCTATAAAGGAAGTGAAAGTGCTCCTCCCTTCGGTCTGATT chr4 + 94230402 79390271 79390270 79390331 79390271 79390270 79390331 61 CCTGCCACATCATATTCCATTCTGTGTAGTAAATAAAAGTGCTCCTCCCTTCATCTTGACT ....:xx..:..:..........:.:x..x..:.:.................:x::...:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -63193602 -31036800 +3156 chr4 + 190214555 16218276 16218275 16218347 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAACCCAGAGGCAGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x........x..x::..x:xx:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -59814930 -34415472 +3149 chr4 + 190214555 16262088 16262087 16262165 78 ATGACATATATAT---ATGTGTATATATATATATGTGTGTGTTTGTATATATATATGTGTGTGTATATATATATGTATATA chr4 + 94230402 21429670 21429669 21429750 21429670 21429669 21429750 81 ATAGCATCTGCATTGGATGCTTAATCATATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACA ..::...x.::..---...:x..xx:.....x.:..x.x.x..x..x.......:.......:..............x.:. 13M3I65M 57/78 73.1% 81/94230402 0.0% 3/78 3.8% -5167582 -89062820 +3162 chr4 + 190214555 16262103 16262102 16262217 115 GTGTATATATATATATGTGTGTGTTTGTATATATATATGTGTGTGTATATATATATGTATATATATATAC-ACACACACACAC-AATACTCTTCATTGCTATGTTTGGACTAGTGCA chr4 + 94230402 79265519 79265518 79265635 79265519 79265518 79265635 117 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCA ....:.:.:.:.::.........x:........:...:::.....:.:.:::.x.::...x.:.:.x:..-....x:x:.:.:-...:.x...::::x:.x..xx..x..x.:.... 70M1I12M1I33M 70/115 60.9% 117/94230402 0.0% 2/115 1.7% -63003416 -31226986 +3223 chr4 + 190214555 16262120 16262119 16262160 41 TGTGTGTTTGTATATATATATGTGTGTGTATATATATATGT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT ..............:......:..............x..:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -32696555 -61533847 +3058 chr4 + 190214555 16287053 16287052 16287135 83 CTCCGTCTCAAAAACAAAACAAAACAAAAACAAAAACCAATAATTTAGAAATTAATGCAGTTTATAAACATCAGCATTTTAAA chr4 + 94230402 6760476 6760475 6760558 6760476 6760475 6760558 83 CTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAAGCAAGCAAAAAAACATCACCAGTTAAAA ...:x.......................x.x.......xx:..xx:.x:..xx..xxx..:xx.x........x..x..x... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 9526577 NA +3709 chr4 + 190214555 16296406 16296405 16296488 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGAAGACGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x::..............x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -59736791 -34493611 +3470 chr4 + 190214555 16299130 16299129 16299196 67 TGTAATCTCAGCTACTTGGTAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.::..........:x........x.xx.x...x.............:..x.xx:..:..:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -59734081 -34496321 +3057 chr4 + 190214555 16304585 16304584 16304639 55 TCTCTGTCAATGTCTGTGTGTATCTGTGTATGTGTCTTTGTATGTCTGCATGTAT chr4 + 94230402 23449071 23449070 23449125 23449071 23449070 23449125 55 TCTTTGGCAATGTCTGTGTGTATTTGTGTCTGTCTATATGCATGACTGTAAATAT ...:..x................:.....x...x.x.x..:...x...:.x:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -7144486 -87085916 +7160 chr4 + 190214555 16334858 16334857 16335002 145 TCACTTGAAACTAAACTTCCGCCATCTGTTCTACCCTTTAACTGCAAATGCAAAAAGAACACCATTCCCAGTGGCATCATAAAAA-GTTAGATATAAGTGATTTAAATGCATGTTTTGGTTTTGTATTCATTGCAATATACATCTG chr4 + 94230402 9302644 9302643 9302788 9302644 9302643 9302788 145 TCACTTTAAACCAAGCCTTTACCATCTGTTTCAACCTCTAATTACAAATGCAAAA-TAACACAATTCACAATTGCATCATAAAAAAGTAAAATATAAGTGATTTAAATGCATGTGTGTGTTCCTTATGCAAGGCAGCCTTCATCTG ......x....:..:.:.:::.........::.x...:...:.:...........-x.....x....x..:.x............-..x.:.......................x.xx...::x...x..xx...::x.x...... 55M1D29M1I60M 111/144 77.1% 145/94230402 0.0% 2/144 1.4% 7032214 NA +3444 chr4 + 190214555 16336412 16336411 16336496 85 AGCAAGAGCAAAAGAAACTCCAT---CTCAAAAAAAAAAAAAAAACAAAAAACACAAAAACAAACAAACAAAAAATGAC--CAAAAAAAC chr4 + 94230402 49206589 49206588 49206678 49206589 49206588 49206678 90 AGAAGAATTAAATGAAATGTTATAAACTTTAGGAAGAAAAAAAAAAAAAACACACAAAAGCAAACAACCAAACAACGACAACAAAAGAAC ..x.::.x:...x....:x::..---..:x.::..:.........x....x........:.......x....x..:...--.....:... 23M3I53M2I9M 63/85 74.1% 90/94230402 0.0% 5/85 5.9% -32870177 -61360225 +3226 chr4 + 190214555 16336429 16336428 16336483 55 CTCCATCTCAAAAAAAAAAAAAAAACAAAAAACACAAAAACAAACAAACAAAAAA chr4 + 94230402 68134250 68134249 68134304 68134250 68134249 68134304 55 CTCCCTGTAGGAAAAGGAAAAAAAACAACAACAACAAAAACAAACAAACAAGAAA ....x.x.x::....::...........x..xx..................:... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -51797821 -42432581 +3023 chr4 + 190214555 16336440 16336439 16336486 47 AAAAAAAAAAAAAACAAAAAACACAAAAACAAACAAACAAAAAATGA chr4 + 94230402 26397819 26397818 26397865 26397819 26397818 26397865 47 AAAAAAAAGGAAAACAACAACAACAAAAACGAACAACCAAAGAATGA ........::.......x..xx........:.....x....:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -10061379 -84169023 +3331 chr4 + 190214555 16336456 16336455 16336558 103 AAAAACACAAAAACAAACAAACAAAAAATGACCAAAAAAACCATATTACGTAC---ATTACTATATATAATATAAATAA---AAAAGAATGAGATAATACAAACAATAT chr4 + 94230402 9875537 9875536 9875645 9875537 9875536 9875645 109 AAAAAAACAAAAACAAACAAACAAAAAAAACCCCAAAAAACCCTTTTAAAAATAAAATCAAGATATACACTCTATATTAAGGAGAGGAAGCAGAAAATTGACACAATGT .....x......................x:x..x........x.x...x:x.:---..:.xx.....:.x.x..x..x.---.:.:...xx...x...xx.x.....:. 53M3I23M3I27M 75/103 72.8% 109/94230402 0.0% 6/103 5.8% 6460919 NA +3076 chr4 + 190214555 16337782 16337781 16337843 62 CATGTATATATATGTATATATATACACATATATATACATATATATACATGTATATACACACA chr4 + 94230402 61270774 61270773 61270835 61270774 61270773 61270835 62 CATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ....x......x.........:..:.:.:::.::....:.x.:.:x........x::..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -44932992 -49297410 +3066 chr4 + 190214555 16337789 16337788 16337851 63 ATATATGTATATATATACACATATATATACATATATATACATGTATATACACACACATTTTAA chr4 + 94230402 64054809 64054808 64054871 64054809 64054808 64054871 63 ATACTTGTATGTGTTTACACGCATACACACATTTATATACATGTATATTTACCTGTCTTTCAA ...:x.....:.:.x.....::...:.:....x...............x:..x:::x...:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -47717020 -46513382 +4231 chr4 + 190214555 16339442 16339441 16339624 183 TGTTTTACTCAATAGGTTTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACACACATATATACTTTTTATTTTTATTTATTTTATTTATTATATATAGAGGTATATATAAATATATAT---TTTTATA----GTTATATATATTTATAGTTATAAGTTTTTATGCTACAGTA chr4 + 94230402 4618340 4618339 4618522 4618340 4618339 4618522 183 TGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATATTATATA---TTATATGTTGTACTAAT--AATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacata-tacaata ......x..:xx.x.xx:::.........::..............x:....::......x.x..:.:.-::.:.x.....:.x.x..---....x.:..x..:.x..--x...::...:..x...x::..x...x.---:..::..----:..........x....xx.:.x..x..x:..:-....:.. 68M1D18M3D17M2D27M3I7M4I32M1D7M 120/176 68.2% 183/94230402 0.0% 14/176 8.0% 11721102 NA +3819 chr4 + 190214555 16339448 16339447 16339526 79 ACTCAATAGGTTTC-----TATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACACACA----TATATACTTTT chr4 + 94230402 60831509 60831508 60831596 60831509 60831508 60831596 88 attcaacagttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT .:....:..x.::.-----.....x.....x.............x.x.......:.:....:......:....----..x....x... 14M5I54M4I11M 64/79 81.0% 88/94230402 0.0% 9/79 11.4% -44492061 -49738341 +3311 chr4 + 190214555 16339453 16339452 16339552 100 ATAGGTTTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACAC--------ACATATATACTTTTTATTTTTATTTATTT-TATTTATTATA chr4 + 94230402 60831523 60831522 60831631 60831523 60831522 60831631 109 atacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCTCATA ...x:.x.........x.............x.x.x.x...:.:....:.:.:..:.....--------....x....:xx.:.:.x:x:..x.:.x.-.....x.:... 60M8I29M1I11M 71/100 71.0% 109/94230402 0.0% 9/100 9.0% -44492070 -49738332 +3057 chr4 + 190214555 16339455 16339454 16339505 51 AGGTTTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA chr4 + 94230402 26955835 26955834 26955885 26955835 26955834 26955885 51 AGTTTCCTACACATTTCTCTCTCTCTCCTTCTCTCTATATATACATATTTA ..x..:...:x:x.:............::..............:....x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -10616380 -83614022 +3702 chr4 + 190214555 16339463 16339462 16339548 86 ATCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACACACATATATACTTTTTATTTTTATTTATTTTATTTAT chr4 + 94230402 60831527 60831526 60831607 60831527 60831526 60831607 81 aTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA-----CTTCTAAATACATTTATATGGTCTGT ..x...x.....x.............x.:.......:.:...........:..:.-----:..:..xx.x:......x.x:.:.:. 55M5D26M 61/81 75.3% 81/94230402 0.0% 5/81 6.2% -44492064 -49738338 +3113 chr4 + 190214555 16339466 16339465 16339514 49 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACACAC chr4 + 94230402 60831534 60831533 60831582 60831534 60831533 60831582 49 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC .....x.............x.x.x.....:.:....:.:....:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -44492068 -49738334 +3392 chr4 + 190214555 16339468 16339467 16339517 50 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACACACACATA chr4 + 94230402 60831530 60831529 60831579 60831530 60831529 60831579 50 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCA ...x.....x.............:.:.......:.:..:........::. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -44492062 -49738340 +3133 chr4 + 190214555 16367205 16367204 16367306 102 TTTTTATTTACTTTTCCCTGATCATTAGTATCTTTTTAAAATTATTT--ATTTATTTATTTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTATT chr4 + 94230402 8984555 8984554 8984658 8984555 8984554 8984658 104 TTGTTTTGTATTTTTTTCTGTAAGAAAACATCTCCTGCCATTTGTTTTCATTTATTTTATTATTCTCTGTGTGTGTGCGTGTGTGTGGTTTTGTGTTTTGTCTT ..x..x.x..:....::...xxx:xx.::....::.xxx.x..:...--........xx.....x.x..........:.........xx.x.....x..x.x.. 47M2I55M 70/102 68.6% 104/94230402 0.0% 2/102 2.0% 7382650 NA +3006 chr4 + 190214555 16382797 16382796 16382842 46 TCCTTCCTTCCTTCCTTCTCCTTCCCTCCCTCCCTCCCTGCCTCTT chr4 + 94230402 74430681 74430680 74430726 74430681 74430680 74430726 46 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTT .....::..::......:.:......::..:..:......:..... 46M 35/46 76.1% 46/94230402 0.0% 0/46 0.0% -58047884 -36182518 +3360 chr4 + 190214555 16397167 16397166 16397234 68 TGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834547 85834546 85834614 85834547 85834546 85834614 68 TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....:.............xx..:..x::...:....:..x...:..:.x...::.:.:...:.:.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -69437380 -24793022 +3133 chr4 + 190214555 16407080 16407079 16407158 79 TTTGTTCATTTCTTTTTATTCTTTTTTTCTCTAAACTTCCCTTCTGACTTCATTTCATTCATTTTGTCTTCCATCACTG chr4 + 94230402 40668927 40668926 40669005 40668927 40668926 40669005 79 TTTTTTCCCCCCTTCTCATCTTCTGGTCCAGCAAACCTCCTTTGTGACTTCATTTCTCTTATTTTGTTTTCTTTCTTTG ...x...x:::...:.:..::.:.xx.:.xx:....:...:..x............x:.:.......:...:x..x:.. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% -24261847 -69968555 +3905 chr4 + 190214555 16411097 16411096 16411179 83 CGCAGTGGCGCATGTCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGGAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:......:...:..--.....:.........:x.:........x.xx.x...x.............:..xxxx:..:..:.. 15M2D66M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -59622100 -34608302 +3136 chr4 + 190214555 16425254 16425253 16425383 130 TGCCCATTTTCTAATTAGATTGTTTAGGTTTTTTTTTTTTAACTTCAGAGTTTGGAGAAATATCTACATATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063252 46063251 46063365 46063252 46063251 46063365 114 TACTCGTTTTCCAATTAG--TTTTCAGTATTTTTCCTGGCACATTTA--------------CCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .:.:.:.....:......--.x..:..xx.....::.xx:.xx..:.--------------x:x.....:.:..:........:x::.:..:.x:..:...:.x......:......:xxx.......:. 18M2D27M14D69M 75/114 65.8% 114/94230402 0.0% 16/114 14.0% -29637998 -64592404 +3201 chr4 + 190214555 16425262 16425261 16425371 110 TTCTAATTAGATTGTTTAGGTTTTTTTTTTTTAACTTCAGAGTTTGGAGAAATATCTACATATATATATGTGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 65285521 65285520 65285627 65285521 65285520 65285627 107 TCCTAAAAAGACTGCT---ACTTTCATGCTTCAGTTTTATAATTAGGTGAAATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATA .:....xx...:..:.---::...:x.x:..:.::..:.x.:..x..x.......x.xx..:.xx.xx.:.x..:.......:....x.........x.:.:.:.x.... 16M3D91M 70/107 65.4% 107/94230402 0.0% 3/107 2.8% -48860259 -45370143 +3482 chr4 + 190214555 16441867 16441866 16441968 102 TATATATATACACATATATGTGTGTATATATGTATACATACATATACTTATATACATACATATATGTACATATATACACACACACGTGTGTGTGTGTGTGTG chr4 + 94230402 21109194 21109193 21109287 21109194 21109193 21109287 94 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTA--------TACGTATGTACTCATGCTTCTGTGTATATGTGTATG ....:..:.::::x.x.:..x.:....x...:.:...x:.........::.:...x..--------...:...:...x..::.x:x.....:.:.....:.. 58M8D36M 63/94 67.0% 94/94230402 0.0% 8/94 8.5% -4667327 -89563075 +3244 chr4 + 190214555 16472610 16472609 16472694 85 GCATTAAAAGCCATCCTGGGCTGCATGTGGCCCATGGGCTGTGGGTTGAACAAGCTTGGTTTAGGGAAATCAGTGCCTGGAGCTC chr4 + 94230402 83270674 83270673 83270757 83270674 83270673 83270757 84 GCACTGTGAGCTGTGCCAGGTTGCATGCAGCCTGTGGACTGTGAGTTAGACATGCTTGGTCT-GGTGTATCTGTTTTAGAAGCTC ...:.:x:...::.x.::..:......::...::...:.....:...::...x.......:.-..x:x...x..x::x.:..... 62M1D22M 55/84 65.5% 84/94230402 0.0% 1/84 1.2% -66798064 -27432338 +4302 chr4 + 190214555 16519683 16519682 16519783 101 CCAAGTCAGCCATTATCTAGCTATGTGTTCTTGGCCAAGAATTTTAGCCTCTCTGA-ATCTCAGTTTCCTCATCTAGAAAATGGGGATAATACTACTTATCT chr4 + 94230402 13242451 13242450 13242551 13242451 13242450 13242551 101 CCAGCTCTGCCACTGACTCACC-TGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTACCT ...:x..x....:.:x..x:.:-....x:.....x....xxx:x..........:.-::..........:.....:x.....:......x.........:.. 22M1D33M1I45M 74/100 74.0% 101/94230402 0.0% 2/100 2.0% 3277232 NA +3009 chr4 + 190214555 16553511 16553510 16553567 57 GGCATGGAGAGGTTTTTTTTGTTGTTGTTGTTTGTTGTTTGTTTGTTTGTTTTCTGT chr4 + 94230402 31432917 31432916 31432973 31432917 31432916 31432973 57 GGTTTGGAGGAGTTTTTTTTTTTGTTGTTGATGATTTTTTGTTTATTTTATTTCAGT ..:x.....::.........x.........x.x:..x.......:...xx....x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -14879406 -79350996 +3162 chr4 + 190214555 16553514 16553513 16553570 57 ATGGAGAGGTTTTTTTTGTTGTTGTTGTTTGTTGTTTGTTTGTTTGTTTTCTGTTTT chr4 + 94230402 90203133 90203132 90203186 90203133 90203132 90203186 54 ATTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTG---GTTTTTTTTTTTTTTGTATT ..x..........................xx...---....x...x....:...x.. 34M3D20M 47/54 87.0% 54/94230402 0.0% 3/54 5.6% -73649619 -20580783 +3157 chr4 + 190214555 16553529 16553528 16553570 42 TTGTTGTTGTTGTTTGTTGTTTGTTTGTTTGTTTTCTGTTTT chr4 + 94230402 59675250 59675249 59675291 59675250 59675249 59675291 42 TTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTACCGTTTT ...............x..............x...x.:..... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -43121721 -51108681 +3253 chr4 + 190214555 16565939 16565938 16566012 74 CATATGACCACACACACACATGTATCTATACATACACACATATACACACACACAAGAAACTCTCAAAATGTTAC chr4 + 94230402 23247721 23247720 23247788 23247721 23247720 23247788 68 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA------AAAAAGTTAC ...:..xx:.::.........x...xx.:.:..::.....:...............:.------....x..... 58M6D10M 52/68 76.5% 68/94230402 0.0% 6/68 8.8% -6681782 -87548620 +3055 chr4 + 190214555 16567370 16567369 16567422 53 GTGTGTGTGTGTGTGCGCGTGTGTGCATGCGTGTGTGTGCATGCGTGTGTGTG chr4 + 94230402 5214264 5214263 5214316 5214264 5214263 5214316 53 GTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ....:..::.x..:::.:.....:...x:...............:x:...... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 11353106 NA +3052 chr4 + 190214555 16570443 16570442 16570527 85 ACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAGTTTACATCTCAGTGATAGCCAC chr4 + 94230402 18047933 18047932 18048020 18047933 18047932 18048020 88 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCTAAGGTATGACTGACAGCTGC .....:...xx..:.x...:............x........---..:.x:.x.......:x.x.x.:.x.x:.x.x.x...:...::. 41M3I44M 60/85 70.6% 88/94230402 0.0% 3/85 3.5% -1477490 -92752912 +5105 chr4 + 190214555 16581913 16581912 16582064 152 GAAGGAAAGAAGAAAGAAAGAAAGAAAGGAAGGGAGGGAGGGAAATAAAAGAAAGAAGGAAGGAAGGAAGGGAAGGAAGGGAAGGAAGGGAAGGAA---GGAAGGAAGGAAGGAAG---------------------GAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGTAAGT chr4 + 94230402 1500703 1500702 1500878 1500703 1500702 1500878 176 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaat ....::.....:::x.:::.:.....:x..:....:.....:...x..x..:..:.:.::.::x...::.x..x:x:....:.:x..:........---....::..::...:...---------------------:..:.::..::...:.::.......::..:....x..:. 96M3I17M21I39M 97/152 63.8% 176/94230402 0.0% 24/152 15.8% 15081210 NA +3092 chr4 + 190214555 16592472 16592471 16592530 59 ATATATATATATATATATATATATATATATATATACACACACACACACACAAACACACA chr4 + 94230402 74671060 74671059 74671117 74671060 74671059 74671117 58 ATATACAAAAAT-TAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA .....:.x.x..-..xx.:..............................x...x.x.:. 12M1D46M 48/58 82.8% 58/94230402 0.0% 1/58 1.7% -58078588 -36151814 +3080 chr4 + 190214555 16592484 16592483 16592530 47 ATATATATATATATATATATATACACACACACACACACAAACACACA chr4 + 94230402 85078510 85078509 85078556 85078510 85078509 85078556 47 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCA .......:.x....x.......................x..x.x:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -68486026 -25744376 +3001 chr4 + 190214555 16611498 16611497 16611622 125 AAAATGAAGGGAGGGAGGAAACTTTACCAAGCAAATGGAAAGAAAAAAAAAAAGCAGGGATTGCAATCCTAGTCTCTCACAAAACACTTTAAACCAACAAAGGTCAAAAAAGACAAAGAAGGGCA chr4 + 94230402 25997033 25997032 25997156 25997033 25997032 25997156 124 AAAATAGATGACAGTAAGTATCATT-CAAAGCAAATGGGAAAAAAAAAAACAAGCTACAATGTTTACATGAGTCATCTGCACAACATTTTGAAGCAGTGAGCAACAGAAAGGAGAAAAAGGTACA .....::.x.:x:.x.:.x.x.x..-.x..........:..:........x....x:x:..xx:x.:x:x....x::::..x....:...:..x..:::.:x:x..:...:..x...:.:.x:.. 25M1D99M 74/124 59.7% 124/94230402 0.0% 1/124 0.8% -9385535 -84844867 +3098 chr4 + 190214555 16614930 16614929 16615012 83 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -59418267 -34812135 +3058 chr4 + 190214555 16615047 16615046 16615103 57 GCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGTCAAGAAACA chr4 + 94230402 88382708 88382707 88382764 88382708 88382707 88382764 57 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCA ..:.x:....:....xx.x.........::.:...............:xx....:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -71767661 -22462741 +3067 chr4 + 190214555 16618509 16618508 16618567 59 GTGTATGTGTGTATATACACATATGTGTACATACATACACATATCCACACGCACATATA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA ....:.......::..:::::.:xx....:..........:.:.x........x.:... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -62647010 -31583392 +3130 chr4 + 190214555 16623734 16623733 16623799 66 TGAAAGCTGCTTA-AAGTGCTTGAAATATACATACACACACACACACACACACACGTTTTATTTATA chr4 + 94230402 84895779 84895778 84895845 84895779 84895778 84895845 67 TGGAAGCTTTTGAGAAATACTCAAGATATACAGGCATACACACACACACACACACAGTTCCTATATA ..:.....x:.x.-..:.:..::.:.......x:..:..................:x..:x.x.... 13M1I53M 49/66 74.2% 67/94230402 0.0% 1/66 1.5% -68272045 -25958357 +3289 chr4 + 190214555 16672833 16672832 16672921 89 TTCCTTCCT-TCCTTCCTTCCTTTCCTCCCTCCCTCTCTTTCTTCCTTCCTTCCTTTTTTTTCCTTCCCCCTCTCCTTATCTTTTTTCTC chr4 + 94230402 37521438 37521437 37521527 37521438 37521437 37521527 90 TTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCTTGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTTCC ...:...:.-.....::x.x...:..::.::..::..x.x.x..x:..:...xx...::...::.......:.:....x.:......::. 9M1I80M 58/89 65.2% 90/94230402 0.0% 1/89 1.1% -20848605 -73381797 +3056 chr4 + 190214555 16672951 16672950 16673026 76 CTTTTTCCTTTCTCCCTCCCTCCATCCTTTCCTTC-------TTTCCCTTCCTTTCTTTCTTCTTTCTC-----TCTCGTTCCTTCTC chr4 + 94230402 53764540 53764539 53764627 53764540 53764539 53764627 88 CTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTC ........::.....:.:....:x...:.:...:.-------......:.:x:....:.x:::......-----.x..:.:....... 35M7I27M5I14M 55/76 72.4% 88/94230402 0.0% 12/76 15.8% -37091589 -57138813 +3013 chr4 + 190214555 16739572 16739571 16739618 47 GGAAAAAAAAAAAAAAAAATATATATATATATATATATGTATATATA chr4 + 94230402 1495005 1495004 1495051 1495005 1495004 1495051 47 GAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA .:........x.:...............:.:..:...::....x... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 15244567 NA +3946 chr4 + 190214555 16739572 16739571 16739654 83 GGAAAAAAAAAAAAAAAAATATATATATATATATATATGTATATATACATGTGTGTGTATATATGTATATATACATATGTGTG chr4 + 94230402 86633909 86633908 86633991 86633909 86633908 86633991 83 GGAAAAGACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ......:.x...:..x:.:::.:::.:::..x:.......x.:........:...........::.x.:...:...x...:.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -69894337 -24336065 +3231 chr4 + 190214555 16739580 16739579 16739640 61 AAAAAAAAAAATATATATATATATATATATGTATATATACATGTGTGTGTATATATGTATA chr4 + 94230402 58988593 58988592 58988653 58988593 58988592 58988653 61 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATA ......:...x............:.:.:.........x......x.xx:..x::..x.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -42249013 -51981389 +3171 chr4 + 190214555 16739594 16739593 16739685 92 ATATATATATATATATGTATATATACATGTGTGTGTATATATGTATATATACATATGTGTGTATATATGTATATATACATATGTGTGTATAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....x...x....:.......x..x...:x.xx:..:..:..:.x.:x:x...::..:...x:x.:...:.:.:.::....:...x..x.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% -73073375 -21157027 +3441 chr4 + 190214555 16739684 16739683 16739771 88 ATATGTATATATACATATATGTGTATATATGTATATATACATATATGTGTATATACATACATATACATATATATATAACTATTCTTAA chr4 + 94230402 43288468 43288467 43288552 43288468 43288467 43288552 85 ATACGTATGTATTCAAA---ATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGACTAACATGCTTAA ...:....:...x..x.---:.:....:.......x..:...........x.:.:....:...x.x..x..x.x.:x.x:..x..... 17M3D68M 62/85 72.9% 85/94230402 0.0% 3/85 3.5% -26548784 -67681618 +3113 chr4 + 190214555 16739697 16739696 16739758 62 CATATATGTGTATATATGTAT------ATATACATATATGTGTATATACATACATATACATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:.......:..:.....------..:.x...:.....x..........:..:xxx.......:. 21M6I41M 49/62 79.0% 68/94230402 0.0% 6/62 9.7% -29323601 -64906801 +3003 chr4 + 190214555 16742060 16742059 16742116 57 TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTGAGAGTGTCTCACTCTGTTGCCAG chr4 + 94230402 51122853 51122852 51122909 51122853 51122852 51122909 57 TTTCGTTTGCTTTTTTTTTTTTTTTTCTGTTTTAAAAGCTTCCTGCTCTGTTTTCAG ...:x...x.....:...........:.x....:.:..:x..:::.......x:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -34380793 -59849609 +3516 chr4 + 190214555 16766349 16766348 16766524 176 GTGTTTGAAGACCTATCCAATTTATATATACACATATATATGTGTG----CATTTATATATATACACATATATGTCTATATATAAATGTATGTATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGTGTGTGT-GTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTTTG chr4 + 94230402 21109168 21109167 21109348 21109168 21109167 21109348 181 GTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACAGTTTCAGTTCTACTTTCCTG ..:.:....:.x:x.xxx.....::x......::.:.:.x.x....----:........:..:x........:x:x.:..:x..x.:.......:x::..:x.x.:.:....:::::.::x.....::..:::::.x.xx.::-..x.x....x....:::xx.x:.x..:.x:...::.. 46M4I93M1I37M 100/176 56.8% 181/94230402 0.0% 5/176 2.8% -4342819 -89887583 +3508 chr4 + 190214555 16766385 16766384 16766516 132 TATATGTGTGCATTTATA-TATATACACATATATGTCTATATATAAATGTATGTATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTT chr4 + 94230402 89812949 89812948 89813071 89812949 89812948 89813071 123 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCT-TA---------ATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTT .......xx.::...:.:-:.....x.:.x......x.....x......:x.-..---------...:..:.:..x..x.x:..::..:...x:x.............:.:.:...x.:x:.x.xx.x..... 18M1I33M1D2M9D69M 84/122 68.9% 123/94230402 0.0% 11/122 9.0% -73046564 -21183838 +3031 chr4 + 190214555 16766413 16766412 16766481 69 TATATGTCTATATAT------AAATGTATGTATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGT chr4 + 94230402 37579499 37579498 37579573 37579499 37579498 37579573 75 TATATGGCTTTACCTTGGGCCATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ......x..x..:x.------.x..:.....:.....:........x..:.....:......xx....::x:... 15M6I54M 52/69 75.4% 75/94230402 0.0% 6/69 8.7% -20813086 -73417316 +3479 chr4 + 190214555 16766423 16766422 16766511 89 TATATAAATGTATGTATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 21109194 21109193 21109282 21109194 21109193 21109282 89 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGT ....:.x:...:.x.x....x.:....x.....::..x........:x:....::x.:.::..:...::x::..:x.x.........:. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -4342771 -89887631 +3023 chr4 + 190214555 16766434 16766433 16766500 67 ATGTATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...::.:..xx......:.:x.:x..x:.x....:.........:.........::..:::.:.:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -10559057 -83671345 +3145 chr4 + 190214555 16766438 16766437 16766504 67 ATGTGTGTGTATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx.:....:..x::x..x..x..:...........:.........::..:::.:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -10559053 -83671349 +3058 chr4 + 190214555 16766447 16766446 16766492 46 TATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857611 6857610 6857656 6857611 6857610 6857656 46 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ......::....:..::...x..........x...........x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 9908836 NA +3027 chr4 + 190214555 16766448 16766447 16766494 47 ATATATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......:::...:..:....x:.........x...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 9908838 NA +3186 chr4 + 190214555 16766452 16766451 16766523 72 ATATACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTTT chr4 + 94230402 6857610 6857609 6857675 6857610 6857609 6857675 66 ATATATACGTACATAC------GTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTT .....:..::.....:------..:.:x:.........x...........x..x.x...x.......:.:.. 16M6D50M 51/66 77.3% 66/94230402 0.0% 6/66 9.1% 9908842 NA +3777 chr4 + 190214555 16787484 16787483 16787556 73 TGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGGAGGCTACGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........:.::........x.xx.x...x.............:..x:.xx..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -59245721 -34984681 +3575 chr4 + 190214555 16789802 16789801 16789873 72 TACGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:.:.x......:.........:..:........x.xx.x...x..........::.:..x.xx:..:..:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -59243403 -34986999 +3582 chr4 + 190214555 16797907 16797906 16797995 89 CACCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGAAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...x.....::...........::........x.xx.x...x::......:.......x:xx:..:..:..------..x..x...... 71M6D12M 61/83 73.5% 83/94230402 0.0% 6/83 7.2% -59235300 -34995102 +3456 chr4 + 190214555 16798052 16798051 16798128 77 AAGCTGTATAATCTTAGGCAAATTATTTTATTTAATTGTGCTTTGGTTTCCTTAGCTGAAAAATGGGATTAATGATG chr4 + 94230402 79037109 79037108 79037185 79037109 79037108 79037185 77 AAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATG .........:.:......x..:............x:..x.:..:::..:.:::.:x.:x......x.:xx...:... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -62239057 -31991345 +3064 chr4 + 190214555 16805060 16805059 16805119 60 GAGAGAGAGGAAGAGAAAGGAGAGAGAGGGAGATGGAGAGAGAGAGAAGGGTAGAGAGAC chr4 + 94230402 44836221 44836220 44836280 44836221 44836220 44836280 60 GGGAGACAGGATGAGAAGGGAGAGAGAGAGAGGGGGAAACAAAGCGGGGAGAGGAGAAAC .:....x....x.....:..........:...:x...:.x.:..x.::.:.x:....:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -28031161 -66199241 +3149 chr4 + 190214555 16816072 16816071 16816150 79 GTGGTGGGCACCTGTAATCCTAGCTACTTGAGAGGCTGAGGCAGCAGAATTACTTGAACCCTGGAAGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:.:..........:........x.xxxx...x:..........x.:.:x:xx:..:..:.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -59217129 -35013273 +3759 chr4 + 190214555 16851454 16851453 16851546 93 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGAGAGAATCACTTGAAACCAGGAGGTGGAGGTTGCAG----TGA-GCCAAGC chr4 + 94230402 76033197 76033196 76033292 76033197 76033196 76033292 96 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGC ..::......--...x....:.:...........::........x:xx.x...x........x....:..x.xx:..:..:..----...-....... 10M2D71M4I3M1I7M 70/91 76.9% 96/94230402 0.0% 7/91 7.7% -59181743 -35048659 +3100 chr4 + 190214555 16862497 16862496 16862575 79 ATAGTGG-ATACCTGTAATCCTAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCCGGAAGTGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....-::..x....:.:.:.........::........x.xx.x...x::.........x.:.:x.xx:..:..:.. 7M1I72M 54/79 68.4% 80/94230402 0.0% 1/79 1.3% -59170701 -35059701 +3584 chr4 + 190214555 16864796 16864795 16864867 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGGGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.............::.x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -59168410 -35061992 +3097 chr4 + 190214555 16886904 16886903 16886962 59 GCACCTGTAGTCCCAGCTACTCGTGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.x:........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -59146302 -35084100 +3093 chr4 + 190214555 16889064 16889063 16889099 36 CTCTCTCTCTCTCTCTCTCACACACATAAACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa ..........................:.x....... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -58358989 -35871413 +3171 chr4 + 190214555 16897881 16897880 16897932 52 TTTGTAAAAAAGAAAATATATATATATATATATATATATATATATATATATA chr4 + 94230402 25262926 25262925 25262977 25262926 25262925 25262977 52 TTTGGAAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATA ....x.......x........:.....x..:.:.....:x..:.:....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -8365045 -85865357 +3036 chr4 + 190214555 16897886 16897885 16897951 66 AAAAAAGAAAATATATATATATATATATATATATATATATATATATATATATACACATATGTATAT chr4 + 94230402 58988593 58988592 58988658 58988593 58988592 58988658 66 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTAT ..........x............:.:.:..:......x.:..:.x.xx...x:..:x...:xx... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -42090707 -52139695 +3707 chr4 + 190214555 16899480 16899479 16899587 108 GTCTTTTTTCCCAGGAAGGAAAAACAAACAAACAAACAAACAAAAAACCCA--AACAGACCTCCCAATAAGACAGGAAAAGCAAAGA----AGGAGAAAACTGC----CACAAAAATG chr4 + 94230402 31527591 31527590 31527708 31527591 31527590 31527708 118 GTCTTACTCCTCAACAAGAAAAAGAAAACAAACAAACAAACAAAAAACCCAACAACCCACTTCTCTGTCATTGCCAAATAACAAACACCTTAGGACAAAACTGCAGTACACCAAGATG .....x:.:.:..:x...:....:x..........................--...xx..:..:.x:.x.xxxxx:..x.:....x.----....x........----...x..:... 51M2I34M4I13M4I10M 80/108 74.1% 118/94230402 0.0% 10/108 9.3% -14628111 -79602291 +3015 chr4 + 190214555 16899495 16899494 16899533 39 AAGGAAAAACAAACAAACAAACAAACAAAAAACCCAAAC chr4 + 94230402 14643426 14643425 14643464 14643426 14643425 14643464 39 AAGGAAAAACAAACAAACAAAAAAAAAAACAACCCAAAC .....................x...x...x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 2256069 NA +3215 chr4 + 190214555 16926774 16926773 16926878 105 TCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTCCCTCTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x...::........::.x...:..:..x..x......x.x.:..::x:.xx....x..xx:x.:..:.:x::.:.:...x:.x....:.x.::...:..:.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% -15968824 -78261578 +3065 chr4 + 190214555 16926784 16926783 16926864 81 CTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCT-TCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ....:.:...::..x.::..x..:.:..-....:....-----..x.:.........:...::...x.....x..xx:.x...... 28M1D9M5I43M 58/80 72.5% 85/94230402 0.0% 6/80 7.5% -40445242 -53785160 +3304 chr4 + 190214555 16926784 16926783 16926901 118 CTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x..::...:-.....:xx:x..:.....:.:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.:..x.xx..::........::.:.::..:...::..:. 13M1D104M 70/117 59.8% 117/94230402 0.0% 1/117 0.9% -46770333 -47460069 +3085 chr4 + 190214555 16926788 16926787 16926872 85 CTTTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTC-----CTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..........::..x.::..x..-----...:....::....-----..x.:.........:...::...x.....x..xx..x.::... 23M5D14M5I43M 59/80 73.8% 85/94230402 0.0% 10/80 12.5% -40445238 -53785164 +3238 chr4 + 190214555 16926790 16926789 16926941 152 TTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTCCCTCTC---TCCCTCCCTCCCTCTCTCTCTCT-CCCTCCCTCCCTTCCTCCTTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 67728276 67728275 67728416 67728276 67728275 67728416 141 TTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCT---------------TATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCT ......x:..x....:....xx..:::.:x.......x.x..---------------.x.x::.....:...::.:..x.x:..:....---.::......x..:x...x.:x..-.:.::x..x.:....:.x.:.:..x..::xx...:..... 42M15D32M3I23M1I40M 88/137 64.2% 141/94230402 0.0% 19/137 13.9% -50801486 -43428916 +3475 chr4 + 190214555 16926794 16926793 16926905 112 CTTTCTTTCTTTCTTTCTC-----TCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCCCT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x..:..:..:..::.-----.:.......:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x..:.::.x.xx...:..:.....::.:.:...:...::.::. 19M5I93M 69/112 61.6% 117/94230402 0.0% 5/112 4.5% -46770323 -47460079 +3793 chr4 + 190214555 16926797 16926796 16926902 106 TCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT----TCTTTCTTTCTTTCTCTCTCCCTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTC chr4 + 94230402 18131220 18131219 18131329 18131220 18131219 18131329 110 TCTGTGTTTGGTACTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTATC ...x.x...xx.x....:x...x..:....x.....:::...:.x.:.:..:----..:::.......::..x.........:xx.:.:.x..::::....:.....x.. 52M4I54M 70/106 66.0% 110/94230402 0.0% 4/106 3.8% -1204423 -93025979 +3148 chr4 + 190214555 16933342 16933341 16933467 126 GCCACTGCACTCCAGCCTGGGTGAAAG---AGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGGGATAGTTAGAAAGAGAAGATGAGAAGCTATGTTAAGAAAAAT chr4 + 94230402 84536528 84536527 84536650 84536528 84536527 84536650 123 GCCACTGA----CAGTATGAGTGCCAGCTGAATGAGGCCTTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGT--AGCAAAAT .......x----...:x..:...xx..---.::...:.:::...xx:::...:::...:.......x..x.....x.:....x:.:.:.x.:xx:.....:..:::x:.....::....--..x..... 8M4D15M3I89M2D8M 77/120 64.2% 123/94230402 0.0% 9/120 7.5% -67603186 -26627216 +3598 chr4 + 190214555 16934649 16934648 16934797 149 AAAATACGAAAAATTAGCCAAGTATGGTG----GTGG-GCCCCTGTAATTCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG----------TGAGCCGAGATCGTGCCACTACAC-----CCCAGCCTGGTGA---CAGAGAG chr4 + 94230402 76033168 76033167 76033337 76033168 76033167 76033337 170 AAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGT-GTGCC-CTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAG ...:..:.x..x:.:.xxx...x...:.:----....-..x.x....:...........:..:........x.xx.x...x.:........::.:..x:xx:..:..:..----------::...x..x:.-.....-...x:.-----......x......---....... 29M4I4M1I72M10I11M1D5M1D6M5I13M3I7M 106/147 72.1% 170/94230402 0.0% 25/147 17.0% -59098519 -35131883 +3036 chr4 + 190214555 16957335 16957334 16957374 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 12548253 NA +3553 chr4 + 190214555 16970812 16970811 16970884 73 TGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -59062393 -35168009 +3562 chr4 + 190214555 16985975 16985974 16986082 108 CACACATATATACACATATGTATACATATATACATACATATATCTATATACACATATATAGATATATA-TGTATACATATATACATACATACAGATATATATACACACA chr4 + 94230402 56938583 56938582 56938690 56938583 56938582 56938690 108 CACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA-ACAGATACTGTATTCATTATTCTGTACATGCAGATGTATATGCATATA ........x...:.:xx.x:....x..:x...:..:.x.x...x.:...x..x.......-.:.x...-.....x...xxx.x::.....:.....:.....:..:.:. 60M1D7M1I40M 75/107 70.1% 108/94230402 0.0% 2/107 1.9% -39952608 -54277794 +3392 chr4 + 190214555 16985992 16985991 16986119 128 ATGTATACATATATACATA--CATATATCTATATACACATATATAGATATATATGTATACATATATACATACATACAGATATATATACACACATATATACACACATATATATGTGTGTGCGTGTATATAT chr4 + 94230402 76376858 76376857 76376972 76376858 76376857 76376972 115 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGA---------------AAATGTGCCTCTCTGTGTGCTTGTTTACAT ...:....x.x.x......--..x.x..x:..:..::....:.x..x..:x.:...........:.:....:.x.......x.x.---------------.x.::.::x.x.x.......x...x..:.. 19M2I64M15D30M 79/113 69.9% 115/94230402 0.0% 17/113 15.0% -59390866 -34839536 +3126 chr4 + 190214555 16986032 16986031 16986128 97 ATAGATATATATGTATACATATATACATACATACAGATATATATACACACATATATACACACATATATATGTGTGTGCGTGTATATATATATATATA chr4 + 94230402 22600182 22600181 22600268 22600182 22600181 22600268 87 ACAGAAATTCAGGAAGACACACATATTCACATGCAAA----------CACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:...x..x:.x.x.x...:.:...:x:....:..:.----------.....::.....x.x....:...:.x....:........::..::.::.. 37M10D50M 59/87 67.8% 87/94230402 0.0% 10/87 11.5% -5614150 -88616252 +3108 chr4 + 190214555 16987058 16987057 16987161 104 CAAGTACACACACACACACACACACACACACACACACACACGATGTACTGTATAATTACATTTATAT--AAAATACAAGAAAATGATAAAAGGAATCTTTGTGATA chr4 + 94230402 60987253 60987252 60987358 60987253 60987252 60987358 106 CAGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGCAAGACTATCAGAGCTATAGAAAAAATACAGACAGATTAAAAGGAAAATTTTTGAGATA ..::..x...x.:...:.:......x........::.x...:.x:x:.x:x.:x..:.x.x:....x--........::x.:..x.x..::::...:....x.... 67M2I37M 66/104 63.5% 106/94230402 0.0% 2/104 1.9% -44000195 -50230207 +3015 chr4 + 190214555 17035150 17035149 17035220 71 TGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGTGGGGAGAGAGAGAGAGGAAGTT chr4 + 94230402 62123657 62123656 62123727 62123657 62123656 62123727 71 TGTGCGTGTGTGTGTGTGTGCACATGAAAAGTGGGGAGGGAAGGAAAACAAGATGTAAGAGGGAAAACGTT ....:...............::::...:.::x:.:...:..::..:.::::.:x.x:....:..::.x... 71M 44/71 62.0% 71/94230402 0.0% 0/71 0.0% -45088507 -49141895 +3029 chr4 + 190214555 17035851 17035850 17035927 77 TTTTTTTAAAATTTTTTTATTTTTTTATTTTTTATTTTTATTTTATTTTATTTTATCTTTTATTTTATTTTTTCTTT chr4 + 94230402 77399836 77399835 77399912 77399836 77399835 77399912 77 TTATCTTCAGCTTTTTTTTCTCGTATATTTTTCTTTTCTATATTATTCAGTTTTATCTGATGCTTTTTTCCTTCTTT ..x.:..x.:x.......x:.:x.x.......:x...:...x.....:x:........xx.::...x..::...... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -60363985 -33866417 +3074 chr4 + 190214555 17069813 17069812 17069874 62 GAGGAGAGGAGAGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGA chr4 + 94230402 24028141 24028140 24028202 24028141 24028140 24028202 62 GAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGA ...:.:....:.:xx...:.....:..:.:......::...:.:..:.:::..:..x:.... 62M 41/62 66.1% 62/94230402 0.0% 0/62 0.0% -6958328 -87272074 +3177 chr4 + 190214555 17069814 17069813 17069882 69 AGGAGAGGAGAGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGAG chr4 + 94230402 24028137 24028136 24028205 24028137 24028136 24028205 69 AAGTGAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGACAG .:.x...:.:....:::xx...:.....:..:.:......::...:.:....:::..:..x:....x.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% -6958323 -87272079 +3128 chr4 + 190214555 17081756 17081755 17081809 54 TTTTTTGTTTTGTTTTGTTTTTGTATTTGTGTTTTTGTTTCTTTTTGTTTGTTT chr4 + 94230402 89452746 89452745 89452799 89452746 89452745 89452799 54 TCTTGTGTTTTGTTTTGCTTTTTTATTTGTTTTGTCGTTGTTATCTGTTTGTTT .:..x............:....x.......x..x.:...x:.x.:......... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -72370990 -21859412 +3006 chr4 + 190214555 17081769 17081768 17081814 46 TTTGTTTTTGTATTTGTGTTTTTGTTTCTTTTTGTTTGTTTGTTTG chr4 + 94230402 29671932 29671931 29671977 29671932 29671931 29671977 46 TTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTG ...:.....:..:x:x......x....:.................. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -12590163 -81640239 +3937 chr4 + 190214555 17086385 17086384 17086474 90 GCACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGATGGAGGTTGCAATGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.:...........:.........x.xx.x...x............::..x.xx:..:..:.:------..x..x...... 72M6D12M 64/84 76.2% 84/94230402 0.0% 6/84 7.1% -58946821 -35283581 +3014 chr4 + 190214555 17086492 17086491 17086544 53 CAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAGAAGACAAAGAA chr4 + 94230402 88382709 88382708 88382761 88382709 88382708 88382761 53 CAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ...x:.........xx.x.........::.:..........:..::..x.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -71296217 -22934185 +3077 chr4 + 190214555 17089350 17089349 17089414 65 CAGGGGACACTTCTATCTAAAAAAAAAAAAAAAAAAGAATCAGAAGAAAGAAAAGAAAAAAAAAG chr4 + 94230402 26475355 26475354 26475419 26475355 26475354 26475419 65 CAGGAGATACATCCATCTAAAAAAAGAATAAGGAAAGAGAAAGGAAAAAGAAAGCAGCAGCAAAG ....:..:..x..:...........:..x..::.....:xx..:.:.......:x.:x.:x.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -9386005 -84844397 +3047 chr4 + 190214555 17089569 17089568 17089623 55 AAGAAAAAAAAAAAAAAAGAAACCTACAGCAATTTCTCTACAATGCAGAAATCGA chr4 + 94230402 86229820 86229819 86229874 86229820 86229819 86229874 55 AAGAAAAAAAAAAACAAAAAAACCCACATCTGTTTGCTTACAAAATAGAAATCAA ..............x...:.....:...x.x:...x::.....x::.......:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -69140251 -25090151 +3200 chr4 + 190214555 17094223 17094222 17094286 64 GGAGCAAGGGAAG-AAAGGAGGGAGGCAGGGAGGAAGGGAGAGAAGGAGGGAGGGAGGGAGGAAA chr4 + 94230402 949299 949298 949363 949299 949298 949363 65 GGAGCATCGGATGCAGACAAGACAGGCTGGGGGAAAGGGAGGGGAGGAGGGAGGCGGGGAGGAAA ......xx...x.-.:.x:..:x....x...:.:.......:.:..........x:......... 13M1I51M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% 16144924 NA +3334 chr4 + 190214555 17095987 17095986 17096120 134 TTCCTTCCTCCTCTCTTCTCCTCCCCTCCCCTCTCCTCCCC------TCCTCTCCCCTCTTGTCCCCTCCTCTCCCCTCCTCTCCCCTCCTTTCCCCTTCCCTCCCCTCCCCTTTTCTTCCTTCCTTCCTTCCTTCCTCC chr4 + 94230402 93283207 93283206 93283344 93283207 93283206 93283344 138 TCCATCCATCGTCCCTTTT--TCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTCTCCATCCATCCTCTCCCCCTCCACTTGCATTGCCCTTTCTCCCACC .:.x.:.x..x..:...:.--...::::......:......------..x...:.:.:..x.x:.x:.:..:::..x...x::x:.::..:...:..x...x...:......:.::x:.:x:x::x:....:..:..x.. 19M2D20M6I93M 78/132 59.1% 138/94230402 0.0% 8/132 6.1% -76187220 -18043182 +3160 chr4 + 190214555 17096060 17096059 17096129 70 CTCTCCCCTCCTTTCCCCTTCCCTCCCCTCCCCTTTTCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCT chr4 + 94230402 93982436 93982435 93982505 93982436 93982435 93982505 70 CTTTTACTGCTTTCACATTTCCCCCCCCCCCCCTTTTTTTTCCTCTTCCCTTAACTTCTCCTTCCCTTTT ..:.:x.:x.:..:x.x:.....:....:........:..:.:..:.:....xx:.:........:.::. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% -76886376 -17344026 +3538 chr4 + 190214555 17115929 17115928 17116010 82 GACTTTAGGCAAATGTTTTCATCTCTCCGTTTCTCAATTTTCTCATCTGTAATATGAAGAAGATAATAA-TATTGACCTCACA chr4 + 94230402 83501141 83501140 83501223 83501141 83501140 83501223 83 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACA ....:.:.......xx:..x.:..x.x:..x:....:.....:..:......x...:..xx....:...-..::x........ 69M1I13M 59/82 72.0% 83/94230402 0.0% 1/82 1.2% -66385212 -27845190 +3431 chr4 + 190214555 17130757 17130756 17130823 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -58902454 -35327948 +3198 chr4 + 190214555 17182211 17182210 17182255 45 CTGTTTTTTTTTGTTGTTGTTGTTGT---TTTGTTTTTTTTTTTTGGT chr4 + 94230402 76208469 76208468 76208516 76208469 76208468 76208516 48 CTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTGAT ..........................---.......::.....:..:. 26M3I19M 41/45 91.1% 48/94230402 0.0% 3/45 6.7% -59026258 -35204144 +3343 chr4 + 190214555 17182215 17182214 17182265 51 TTTTTTTTGTTGTTGTTGTTGTTTTGTTTTTTTTTTTTGGTTTTTTTTTTT chr4 + 94230402 81934681 81934680 81934731 81934681 81934680 81934731 51 TTTTTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTTT .......................xx.........x.xx:x........... 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% -64752466 -29477936 +3012 chr4 + 190214555 17270904 17270903 17270949 46 CTCTATCTCAAAAAAAGAAAAAAAGAGAGAGAGAGAGAGGGAGAAA chr4 + 94230402 44890384 44890383 44890429 44890384 44890383 44890429 46 CTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAA ..:.x:.x...::...:.......:.............:....... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -27619480 -66610922 +3068 chr4 + 190214555 17270907 17270906 17270958 52 TATCTCAAAAAAAGAAAAAAAGAGAGAGAGAGAGAGGGAGAAAGGGAGAAAT chr4 + 94230402 66158973 66158972 66159024 66158973 66158972 66159024 52 TACTCCAAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAAT ..:::....::..:....:..:...............:.:x:...x...... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -48888066 -45342336 +3685 chr4 + 190214555 17282095 17282094 17282164 70 GCCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGT chr4 + 94230402 76033206 76033205 76033275 76033206 76033205 76033275 70 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ..x.x....:.:...........::........x.xx.x...x.:..............x.xx:..:... 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% -58751111 -35479291 +3876 chr4 + 190214555 17300758 17300757 17300840 83 CGTGGTGGTGAGCACCTGTAATCCCACCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:...x.......::........x.xx.x...x................x.xx:..:..:.. 10M2D71M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -58732439 -35497963 +3388 chr4 + 190214555 17308617 17308616 17308699 83 CATGGTGGCACATGCCTATAATCCCAACCACTTGAGAGGCTGAGGCACAAGAATTGCTTGAACCCAGGAGGCAGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--.:..:.:...:.:......:........x.x::x...x::...........:..x:xx...:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -58724580 -35505822 +3050 chr4 + 190214555 17308762 17308761 17308818 57 AAAGAAAACAAAACAAACAACAACAACAAAAAAAAAAACACTCAAATCTCATGTAAT chr4 + 94230402 53943322 53943321 53943378 53943322 53943321 53943378 57 AGAAAAGAAAAAATGAACAACAACAACGAAAAAAAAAGTATTCTATCCTGATATAAT .:.:..:.x....::............:.........::.:..x.x:..x..:.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -36634560 -57595842 +4365 chr4 + 190214555 17311685 17311684 17311876 192 CTCTGTTTCCCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA------------------------------------------------------------------------------TATATATATATATATATATACACACACACACACACATACACATATATAGATGTATATATGTATATATACTATATATACACACATATAATATGTGCATGTGCAGGTGTGTCTATCTATCTTTGT chr4 + 94230402 4618339 4618338 4618600 4618339 4618338 4618600 262 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatataca-atacatatatacatatatatatatgta-------tgtatataAAAGAATGTAATATTTGCTTCTGTTGAAGTTCCAGTCTAACCCTGT ..x.x....::.x..x:x.::.x.......::..............x:..x.::......x.x......------------------------------------------------------------------------------...............:.:.xx:xx:...:.:...-.....:.....:.x..:..........-------.:......x.x:x..:......x...x.x..:x.:x..x:.x:....x.::... 69M78I34M1D27M7D54M 130/184 70.7% 262/94230402 0.0% 86/184 46.7% 12693346 NA +4968 chr4 + 190214555 17311687 17311686 17311855 169 CTGTTTCCCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATA-TATATAT-----------------ACACACACACACA-------------------CACATACACATATATAGATGTATATATG------TATATATACTATATATACACACATATA-ATATGTGCATGTGCA chr4 + 94230402 4618339 4618338 4618552 4618339 4618338 4618552 214 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtata ......::..x.:.:x:x.::.x.......::..............x:....::......x.x......-....x.....-.......-----------------.:..:x.x.:.x.-------------------.::..x.xxx......x..:.....:..------..:......x...:...:.:.......-....:..:....::. 69M1I10M1I7M17I13M19I28M6I27M1I15M 125/169 74.0% 214/94230402 0.0% 45/169 26.6% 12693348 NA +4525 chr4 + 190214555 17311695 17311694 17311866 172 CTATTTCTCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATATATA-TATACAC-----------------ACACACACACACATACACATATATAGATG-------------TATATATGTATATAT-------ACTATATATAC-ACACATATAATATGTGCATGTGCAGGTGTGTCTAT chr4 + 94230402 4618339 4618338 4618553 4618339 4618338 4618553 215 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatat-atacatatatatatatgtatgtatat ..:...:...:...----.::.x.......::..............::x...::......x.x......-....x.....-....:.:-----------------.:..:x.x.:.x...x:x..x...xx...-------------.......:.......-------.:..:......-.:......-...::.::..:.::.x..:...x... 14M4I51M1I10M1I7M17I29M13I15M7I11M1I8M1D26M 127/171 74.3% 215/94230402 0.0% 45/171 26.3% 12693356 NA +3644 chr4 + 190214555 17311698 17311697 17311862 165 TTTCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATA-TATATAC-----------------ACACACACACACACATACACATA-------------------TATAGATGTATATATGTA-TATATACTATATAT-ACACACATATA-ATATGTGCATGTGCAGGTGTGT chr4 + 94230402 4618344 4618343 4618553 4618344 4618343 4618553 210 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatat .....:...----.::.x.......::..............x:x...::......x.x......-....x.....-......:-----------------.:..:x.x.:.x.:.x:x.:x..-------------------....x..:.........:-..x..xx:.....:-.:...:.....-....:.::..:..:.x..:.:. 9M4I51M1I10M1I7M17I23M19I18M1I14M1I11M1I22M 120/165 72.7% 210/94230402 0.0% 45/165 27.3% 12693354 NA +3077 chr4 + 190214555 17311710 17311709 17311773 64 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 60831530 60831529 60831593 60831530 60831529 60831593 64 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x...:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -43519820 -50710582 +3686 chr4 + 190214555 17311712 17311711 17311823 112 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATACACACACACACACACATACACATATATAG-ATGTATATATGTATATATACT chr4 + 94230402 60831530 60831529 60831624 60831530 60831529 60831624 95 TCTATCTCTGTCTCTCTCTCTC------------------TGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATT ...x.....x............------------------.:.:.......:.:....:.:....:.....x:x:.x.....:x.....:.-x...::::....:.:....:. 22M18D51M1I21M 69/94 73.4% 95/94230402 0.0% 19/94 20.2% -43519818 -50710584 +3058 chr4 + 190214555 17311714 17311713 17311820 107 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATACACACACACACACACATACACATATATAGAT-GTATATATGTATATAT chr4 + 94230402 60831530 60831529 60831617 60831530 60831529 60831617 88 TCTATCTCTGTCTCTCTCTC--------------------TCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGT ...x.....x..........--------------------.x.:.:.......:.:...........:.....x:x..x.:.:..x..x..-..x.:.::.:..:.:. 20M20D51M1I16M 64/87 73.6% 88/94230402 0.0% 21/87 24.1% -43519816 -50710586 +3037 chr4 + 190214555 17311759 17311758 17311819 61 ATATATATATATATACACACACACACACACATACACATATATAGATGTATATATGTATATA chr4 + 94230402 24017438 24017437 24017498 24017438 24017437 24017498 61 ATAAATAAACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGAATA ...x...x.:..................x.x......:x..x..:x...:..x.:.:x... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -6705679 -87524723 +3018 chr4 + 190214555 17311760 17311759 17311808 49 TATATATATATATACACACACACACACACATACACATATATAGATGTAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x...:................x..:.xx......x.:.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -72512172 -21718230 +3297 chr4 + 190214555 17311767 17311766 17311823 57 ATATATACACACACACACACACATACACATATATAGATGTATATATGTATATATACT chr4 + 94230402 74526074 74526073 74526130 74526074 74526073 74526130 57 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATT ..x:.:...........::x.........x.....x.:............x..x.:. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -57214307 -37016095 +3219 chr4 + 190214555 17330470 17330469 17330541 72 GCACCTGTAATCCTAGCTAGTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.:.....x...::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -58702736 -35527666 +3344 chr4 + 190214555 17331376 17331375 17331415 40 CTTTCTTTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:..:................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -57916673 -36313729 +3535 chr4 + 190214555 17331378 17331377 17331419 42 TTCTTTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:...:.................x.................. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% -57916669 -36313733 +3216 chr4 + 190214555 17331383 17331382 17331417 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ........................:.......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 4730078 NA +3102 chr4 + 190214555 17331384 17331383 17331419 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 4730080 NA +3430 chr4 + 190214555 17340532 17340531 17340591 60 TGCACCTATAATCACAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x.:..:.:x..........::........x.x::x...x.............:.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -58692673 -35537729 +3005 chr4 + 190214555 17348191 17348190 17348233 43 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAATGAAAACTCA chr4 + 94230402 26392948 26392947 26392990 26392948 26392947 26392990 43 CTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACA ....x.......................:.x.......x.x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -9044757 -85185645 +3055 chr4 + 190214555 17351670 17351669 17351743 74 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATGGCTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........::::........x.xx:x...xx:........::.:..x.xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -58681534 -35548868 +3029 chr4 + 190214555 17392768 17392767 17392846 79 AGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAA chr4 + 94230402 41112181 41112180 41112259 41112181 41112180 41112259 79 AAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .:.::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::..:.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -23719413 -70510989 +3098 chr4 + 190214555 17392776 17392775 17392868 93 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAAGGAAGGAAGGAAAGGAAGGAAG chr4 + 94230402 78784176 78784175 78784268 78784176 78784175 78784268 93 AAGCCAACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGG ...xx.:x..:.::..xx..::.....x...:x.:.:.....:..x:...x:..::..:....:x...:xx...:.....:.:...x.::.:. 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% -61391400 -32839002 +9357 chr4 + 190214555 17392790 17392789 17393039 250 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAAGGAAGGAAGGAAAGGAAGGAAGGAAAGGGAACAGAAGGAAGGAG--AGGGTGGAAGGAGAGGGTGGAAGGAAAAAAGAAAGAGAAAGAAAAAAACAGGAAAAACAGAAGAAAGGGAGGAAAGGAAGGGAGGGAAGGAAAGAAAGAGAGAG-AGGAAGAAAGGGAAGAAAAGGAAGGGAGGGAGGGAGGAAGGGAAA chr4 + 94230402 71501681 71501680 71501908 71501681 71501680 71501908 228 gagggaaggagaggaaagagaataggaaggaaggagggaggggggagggaaa--gagggaaggaaggagtagggagaaggaaag-------aagaaaggagtgagggagggagagaaggaagagaggaaagcagagagaggatgaagggaa----------agcaaagagggagaaa------ggagaaaaaggaagaaagaaagAACAGGAAAAACAGGAAGAAAAGGGAGGGAAGAAGGGAGAAAGAGAAA ..::...:..:..:..::.::.x..:...:...:.:.:.:.:::..::....--..:...........:x:.:::.........-------...:......--....x..:..:::...:x.::......:x...:....:.x...:::..----------..x.:.:......:..------....::..:.:........:...:-.....:..x:...........:.....:.:......:...:.... 52M2D30M7D10M2I48M10D16M6D24M1I45M 161/225 71.6% 228/94230402 0.0% 28/225 12.4% -54108891 -40121511 +3146 chr4 + 190214555 17392954 17392953 17393014 61 AAAGGGAGGAAAGGAAGGGAGGGAAGGAAAGAAAGAGAGAGAGGAAGAAAGGGAAGAAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ...:...::...::.:...:.....x..:.............::x.:.::..x::.:.... 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -45082760 -49147642 +3299 chr4 + 190214555 17392960 17392959 17393054 95 AGGAAAGGAAGGGAGGGAAGGAAAGAAAGA-GAGAGAGGAAGAAAGGGAAGAAAAGGAAGGGAGGGAGGGAGGAAGGGAAAGAAAGGAAGAAAAGA chr4 + 94230402 89498607 89498606 89498699 89498607 89498606 89498699 93 AGGAAAAGAA---ATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGA ......:...---.x......:..x...:.-.x::.....xx..:::..:x....:.x.::x..........x.::x...x.....:..:.:.... 10M3D17M1I65M 64/92 69.6% 93/94230402 0.0% 4/92 4.3% -72105647 -22124755 +3123 chr4 + 190214555 17393315 17393314 17393385 71 ACAGAGC--AAGACTTTACCTCAAAAAAAAAAA----AAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGGGAACTA chr4 + 94230402 57721077 57721076 57721153 57721077 57721076 57721153 77 ACAGAGTTAAAGAGACTTCTTCCAAAAAAAAAATAAAAAGGGGGGGGGGGGGGAGGAAGGGGAGGAGTAAGGTGCTA ......:--....xx:.x.:..x..........----.............:..:.:.:...:...:.x.:..x:... 7M2I24M4I40M 54/71 76.1% 77/94230402 0.0% 6/71 8.5% -40327762 -53902640 +3068 chr4 + 190214555 17393319 17393318 17393392 74 AGCAAGA-CTTTACCTCAAAAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGGGAACTAATATAAA chr4 + 94230402 75270192 75270191 75270266 75270192 75270191 75270266 75 AGCAGGAACTCTCTTTCAGAAAAAAAAAAAAGGGGGGGGGGGGGGGATTAGAAAAATCAAAAGATTCAATTTAGA ....:..-..:.x::...:...........:..........:.....xx:.:..::xx..::..x::...x..:. 7M1I67M 51/74 68.9% 75/94230402 0.0% 1/74 1.4% -57876873 -36353529 +3322 chr4 + 190214555 17393323 17393322 17393379 57 AGACTTTACCTCAAAAAAAAA---AAAAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGG chr4 + 94230402 57721089 57721088 57721148 57721089 57721088 57721148 60 AGACTTCTTCCAAAAAAAAAATAAAAAGGGGGGGGGGGGGGAGGAAGGGGAGGAGTAAGG ......:x:.:x.........---...:...........:.:.........:.:.x.... 21M3I36M 46/57 80.7% 60/94230402 0.0% 3/57 5.3% -40327766 -53902636 +3543 chr4 + 190214555 17395112 17395111 17395226 115 TGAGCTGAGAT---TGTGCCA----TTGCTCTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGGCTTGAG chr4 + 94230402 73487500 73487499 73487621 73487500 73487499 73487621 122 tgaGATAAGAGACATGTGCCAGGCCTCACACTGAAGGCTGGTTATAAACAGAAAAAGTGTGGCTAATTAAAAAAAAAGAAAAGAAAAAAAAGTAAACCTGAGATAGATAAAATTGGTTTTAG ....x.:...x---.......----.::.x..xx..x....x:.xx..x..x....x.x..x..x.:..........:....:........:x...xxx:.:.x.:.x........:..x.. 11M3I7M4I97M 81/115 70.4% 122/94230402 0.0% 7/115 6.1% -56092388 -38138014 +3222 chr4 + 190214555 17405222 17405221 17405471 250 GAAAAAAAAGAAGGAGGAAGAAATGAAGGAAGGGAGGGAGAGAAGGAGGAAGAGGAAGAGGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGAAGGATAACCAGATATCTCAAGTATCTTACTCCAGAAATAAGATGGAGAAT--GTAGTGTGCACTCATACCCAAG---TTTCCTC-TCGTTCAAGCTTACAGAAGGATTATTCTTCCTTACTATCTTTGTAATTAGGTGGGATCATGTGACAAGTTTGGTTTAAAC chr4 + 94230402 49044693 49044692 49044923 49044693 49044692 49044923 231 GAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAG----------CAGAAAACTGAG-------ACT-----AGGAAGAGGGAAAATGAGCAATAAGCATAAATCCCTATGCGTTTCCCTCATCACTCAGAAATTCAGAGAATTCCTACCTTTCCAATATTTTT---ATCAAGTTGGCACATGGCAACATTTCATCTTAAAC ....:.x...x..x::....x.x.:.:x..:::::..:....xx::..:....:...::.x:.::..x.....:..:...:...x....----------....x.x..x.:-------...-----.:x....x...:...--.:.:.:x...:xx..x..:.x.---..:....-..::...::xx.x....:::x.:x.x.:.::::.x...:...---..:.:..x..xx....xx.xx.x..::x:...... 89M10D12M7D3M5D15M2I22M3I7M1I42M3D35M 137/225 60.9% 231/94230402 0.0% 31/225 13.8% -31639471 -62590931 +3735 chr4 + 190214555 17431858 17431857 17431940 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -58601339 -35629063 +3301 chr4 + 190214555 17461151 17461150 17461240 90 TGCCTGTCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGAGACGAGATTTCCCTATGTTGGCCATGCTAGTCTCAAAC chr4 + 94230402 91445973 91445972 91446062 91445973 91445972 91446062 90 TGTTTGATTAATTTTCTTTTTTTTTTTTCCTTTTTTAAATTTTCTTACAAAGGAGAACATTTTCCTGCCTTAAAGCTGCCTATTTCAAAC ..::..x:.......:............::......xxx....:...xx.::..x:.x....:...::x..::xxx...:x:.:...... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% -73984822 -20245580 +3362 chr4 + 190214555 17476301 17476300 17476371 71 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .::.x....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -58556905 -35673497 +3249 chr4 + 190214555 17476451 17476450 17476525 75 AGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAAAGAAGGAAGGAGAAGAGAAAAGAAGAGAAGAGAAAAGAAAAA chr4 + 94230402 38078778 38078777 38078852 38078778 38078777 38078852 75 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAA ..x......:.:....:...:....:.::.:......x.x.:.:...xx.xx.x::...:..x:.....:..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -20602327 -73628075 +3252 chr4 + 190214555 17484792 17484791 17484870 79 GTGGTGGACACCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATCACATGAACCTGGGAGGTAGAGGTTACAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x......:.:.......:.::........x.xx.x...x...x......::.:..x.xx:..:.::.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -58548409 -35681993 +3400 chr4 + 190214555 17487989 17487988 17488061 73 GTGGTGGCTCACACCTGTAATCTCAGCAATTTGGGAGGCTGAGGCAGGTGGATCACTTGAGCCCAGGAGTTTT chr4 + 94230402 76033201 76033200 76033268 76033201 76033200 76033268 68 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTT ......-----...x....:.::....x.:...::........x.xx...:.x.......:.....:..:... 6M5D62M 52/68 76.5% 68/94230402 0.0% 5/68 7.4% -58545212 -35685190 +3194 chr4 + 190214555 17496441 17496440 17496493 53 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAACTGGTAGCTCTGTT chr4 + 94230402 73975544 73975543 73975596 73975544 73975543 73975596 53 TTAAAAAAAAAAACAGAAGGAAAAAGAAGAAAGAACAAACTATTTTCTCTGTT .:...........x.:..::.....:..:............:x.xx....... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -56479103 -37751299 +3194 chr4 + 190214555 17526431 17526430 17526520 90 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGAGAGGCAGAGGTTGCAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:.........::::........x.xx.x...xx:.........:::..x:xx:..:..:..------:.x...:..... 72M6D12M 58/84 69.0% 84/94230402 0.0% 6/84 7.1% -58506775 -35723627 +3863 chr4 + 190214555 17528123 17528122 17528214 92 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAACATCACACCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.........:.::........x.xx:x...x.:.........:.:..x.xx:..:..:..------.....x.::... 74M6D12M 63/86 73.3% 86/94230402 0.0% 6/86 7.0% -58505081 -35725321 +3219 chr4 + 190214555 17530300 17530299 17530362 63 GTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAG chr4 + 94230402 76033201 76033200 76033261 76033201 76033200 76033261 61 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ......x::.--....:.:...........::........x.xx.x...x.:........... 10M2D51M 48/61 78.7% 61/94230402 0.0% 2/61 3.3% -58502901 -35727501 +3869 chr4 + 190214555 17532749 17532748 17532822 74 GTGCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGTCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:............:........:.xx.x...x.:........::.:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -58500455 -35729947 +3161 chr4 + 190214555 17533923 17533922 17533984 62 AAAATGAGACCCCCTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAGAGAAAA chr4 + 94230402 55094084 55094083 55094145 55094084 55094083 55094145 62 AAAATAGCCTTCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAA .....::xx::....::..x..::.x........................x...xx.:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -37560161 -56670241 +3225 chr4 + 190214555 17533937 17533936 17534007 71 TCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAGAGAAAAGGTATTGGCAGAATTGTGTTTCT chr4 + 94230402 71832174 71832173 71832244 71832174 71832173 71832244 71 TCTGAAAAAGAAAGAAAAAAAAAAAGCAAAAATAACAAGATGATAACAAGTAACGTCAGAATTACTTTTTT ...x.....:...:..........::x.:...x..x....x..x..x.:...x:.x.......::x...:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -54298237 -39932165 +3038 chr4 + 190214555 17537186 17537185 17537237 52 GACTCTATCAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATGTTTGTAAGAG chr4 + 94230402 37997909 37997908 37997960 37997909 37997908 37997960 52 GATTACATTAAAAAAAAAAAAAAAGAGAGAGAGAGAAATAATCTTTTAAGAG ..:.x:..:...............:...........:.x.xx:..x...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -20460723 -73769679 +3044 chr4 + 190214555 17564025 17564024 17564066 42 ACAGTTGTGGGGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTT chr4 + 94230402 29764364 29764363 29764405 29764364 29764363 29764405 42 ACAATGGTGGGGTTTTTTTGTTTTGTTTTGTTTTTTACTGTT ...:.x............................x.x:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -12200339 -82030063 +3306 chr4 + 190214555 17569569 17569568 17569635 67 AGACTCCACCACACACACACACACACACACAAAAAAAAAAAAAAAGAAGGAGAGATATAAATATGAA chr4 + 94230402 32335932 32335931 32335998 32335932 32335931 32335998 67 AGACTCTCTTTCACACACCCACACGCACACAAAGACAAAGAAAAAAAAAATAATGCATCAATATGAA ......:x::x.......x.....:........:.x...:.....:..::x:.x::..x........ 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -14766363 -79464039 +3029 chr4 + 190214555 17569578 17569577 17569616 39 CACACACACACACACACACACAAAAAAAAAAAAAAAGAA chr4 + 94230402 70425772 70425771 70425810 70425772 70425771 70425810 39 CATGCACACACACGCACACACAAAAAAAAAGAAAAAAAA ..::.........:................:.....:.. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -52856194 -41374208 +3053 chr4 + 190214555 17569582 17569581 17569623 42 CACACACACACACACACAAAAAAAAAAAAAAAGAAGGAGAGA chr4 + 94230402 39686918 39686917 39686959 39686918 39686917 39686959 42 CACACACACACACACAAAAAAGAAAAAAAATAGAATGAGAAA ................x....:........x....x....:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -22117336 -72113066 +3050 chr4 + 190214555 17570617 17570616 17570716 100 GGCAAAGAGCAAGACCCTGTCTCAAAAAAGAAAAAAAAAAGGATATATTTATAGATCAGGAATATTGAAATGAATGTGCAAATGGAGATAAAACTGGTTT chr4 + 94230402 41967523 41967522 41967622 41967523 41967522 41967622 100 GGTGAAAACTAGGACTCTGTCCCACAAAAGACTGTGTAAAGGATATCTGTATATTTCTGAAATGTGCAGAAAAATATTCAAATTAGTTTAAAATTTATTT ..::..:.x:.:...:.....:..x......xx:x:x.........x.x....xx..x.:...:.xx.:.x:...:.x.....x::xx.....:.x:... 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% -24396906 -69833496 +3053 chr4 + 190214555 17573699 17573698 17573755 57 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGATTAT chr4 + 94230402 85834543 85834542 85834599 85834543 85834542 85834599 57 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .:.x.................:.xx:...:x.:...:....:..x...:...x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -68260844 -25969558 +3480 chr4 + 190214555 17608972 17608971 17609041 70 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:...:.--....:.:...........::........x.xx.x...x::...........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -58424225 -35806177 +3098 chr4 + 190214555 17628258 17628257 17628342 85 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATATGTGTG chr4 + 94230402 5214232 5214231 5214316 5214232 5214231 5214316 85 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .......:.::x....x..::::::::.x.::..:.:..:..x...:.:.:.:..:.:.x:::.......::..::.x....... 85M 50/85 58.8% 85/94230402 0.0% 0/85 0.0% 12414026 NA +3256 chr4 + 190214555 17628264 17628263 17628373 110 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATATGTGTGTGTGTATATATATATATGCAATTATACCTTT chr4 + 94230402 79265519 79265518 79265618 79265519 79265518 79265618 100 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---------ACACCTCTATATAAATGCACTT-TGCCTTT .............::........xx.....:.::...::...:.::.:::.:.x::..:.x...:.x:.:.---------::::x.x......x.....x..-.:..... 71M9D22M1D7M 66/100 66.0% 100/94230402 0.0% 10/100 10.0% -61637255 -32593147 +3596 chr4 + 190214555 17628269 17628268 17628344 76 TGTGTGTGTGTGTGTGTGTGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATATGTGTGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x...................xx:.:..x..:..:......:x..::....x.:.::.:.:...::::::.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -68206272 -26024130 +3227 chr4 + 190214555 17628271 17628270 17628337 67 TGTGTGTGTGTGTGTGTGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x...............:.:.xx..:.:x.:...:..:....x:..::...x...::.:.:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -68206270 -26024132 +3163 chr4 + 190214555 17628278 17628277 17628372 95 GTGTGTGTGTGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATATGTGTGTGTGTATATATATATATGCAATTATACCTT chr4 + 94230402 79265519 79265518 79265612 79265519 79265518 79265612 94 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCACTTT .............:......:.:xx:.......::.::.:..:..:::::::.x.:....x.....x:::.-.:.:x.x...::..x.::..:.. 71M1D23M 58/94 61.7% 94/94230402 0.0% 1/94 1.1% -61637241 -32593161 +3324 chr4 + 190214555 17632033 17632032 17632097 65 TTTAATGTCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACAGGG chr4 + 94230402 22379167 22379166 22379231 22379167 22379166 22379231 65 TTCAGTGTCAATTTTTTTTTTTTTAATCCTTGGTTACAGTTTTTTTTTTTTTTTTGGGGGGGGGG ..:.:...................xx.::..xx..x:xx..................:.:x:... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -4747134 -89483268 +3071 chr4 + 190214555 17651518 17651517 17651575 58 ACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAA chr4 + 94230402 18047933 18047932 18047990 18047933 18047932 18047990 58 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAA .....:...xx..:.x...:............x........xx:....x..x..:... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -396415 -93833987 +3030 chr4 + 190214555 17666945 17666944 17666985 41 TTGTTTTTTTGTTTTTTTGTTTTTTGTTTTGTTTTATAAGA chr4 + 94230402 55056285 55056284 55056325 55056285 55056284 55056325 41 TTGTTTTTTTGTTTTTTGGTTTTTTGTTTTGTTTTTTCAAA .................x.................x.x.:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -37389340 -56841062 +3439 chr4 + 190214555 17685418 17685417 17685491 74 GTGCGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x.:....:...........::........x.xx:x...x.:.........:.:..x.xx:.x:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -58347786 -35882616 +3572 chr4 + 190214555 17691556 17691555 17691628 73 TGCGCCTGTAATTCCAGCTAGTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.........x...::........x.xx.x...x::...........:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -58341649 -35888753 +3373 chr4 + 190214555 17703795 17703794 17703873 79 GTGGCACATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--...:..:...........::........x.xx.x...x::.........:.x..x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -58329406 -35900996 +3596 chr4 + 190214555 17708652 17708651 17708731 80 AGGAAACAAAACTATATATATATATATATATATATATA------TATATATATATATATATATAGTGTCTGTGTGTGTGTGTGTGT chr4 + 94230402 86234531 86234530 86234616 86234531 86234530 86234616 86 AGGCCACAGACCTATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTGT ...xx...:.x........x........xx.:..x...------...x.:..xx..x..:....:...x.....:........... 38M6I42M 62/80 77.5% 86/94230402 0.0% 6/80 7.5% -68525879 -25704523 +3180 chr4 + 190214555 17711457 17711456 17711507 51 AATACAGCAAGACTCAGTCTCAAAAAAAATAAAACAAAAACAAAAACAAAA chr4 + 94230402 28489352 28489351 28489402 28489352 28489351 28489402 51 AAGAAAGCAAGACTTGGTTTGAAAAAAAAAAAAACAAACACAAGAACAAAA ..x.x.........::..:.x........x........x....:....... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -10777895 -83452507 +3803 chr4 + 190214555 17715344 17715343 17715417 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACGCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x.xx.x...x.........x.:.:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -58317860 -35912542 +3062 chr4 + 190214555 17720877 17720876 17720968 92 TTCATCTAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAGAAAAGAAAAAGAAATTAAACATAGAATTTCATATGATCCAGTAATTCCATT chr4 + 94230402 74258081 74258080 74258172 74258081 74258080 74258172 92 TTCGTTTAAAAATAAAAAACAAAACAAAAAAGGTAAAGGCAGTAGACAGTAGAACTTAGACATAAAGTTTCAGATTTCCCAATTTTTTTACT ...:.:......x......x....x.:...:::x....:x::x.::x.:x....x...:.....:.:.....x..xx:...:.xx..::.:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% -56537204 -37693198 +3029 chr4 + 190214555 17760471 17760470 17760514 44 AAAAAAAAAAAACAAAAACAAACAAACAAACAAAAAACAAAAAA chr4 + 94230402 86617579 86617578 86617622 86617579 86617578 86617622 44 AAAAAAGAAAAACAAAAACAACCAAATAAACCAAAAACAGAGGA ......:..............x....:....x.......:.::. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -68857108 -25373294 +3093 chr4 + 190214555 17760473 17760472 17760518 46 AAAAAAAAAACAAAAACAAACAAACAAACAAAAAACAAAAAACCCT chr4 + 94230402 73849862 73849861 73849907 73849862 73849861 73849907 46 AGAAAAACAACAACAAAAAACAAACAAACAAAAAACAAAATAACCT .:.....x.....x..x.......................x.x... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -56089389 -38141013 +3048 chr4 + 190214555 17760475 17760474 17760541 67 AAAAAAAACAAAAACAAACAAACAAACAAAAAACAAAAAACCCTGAAATTCTACAGA-AGTGAAGGCT chr4 + 94230402 73441384 73441383 73441451 73441384 73441383 73441451 68 AAAAAAAAGCAAAACAAACAAACAAAAAAAAAAACAGGAACTTTTAAATTTTAAACATAGTTTAGGCT ........xx................x......xx.::...::.x.....:..x.x.-...xx..... 57M1I10M 52/67 77.6% 68/94230402 0.0% 1/67 1.5% -55680909 -38549493 +3130 chr4 + 190214555 17786315 17786314 17786362 48 CCTGTCTCTAAAAATAAAAACAAACAAACAAACAAACAAAAAACCCAC chr4 + 94230402 54170545 54170544 54170592 54170545 54170544 54170592 48 CCCATCTGCTAAAATATAAACAAATAAACAAACAAACACAAAACCCAC ..::...x:x......x.......:.............x......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -36384230 -57846172 +3288 chr4 + 190214555 17858588 17858587 17858670 83 CATGGTGGGGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....x...:.--....:.:...........::........x.xx.x...x::........x:.:..x.xx:..:..::. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -58174609 -36055793 +3097 chr4 + 190214555 17881121 17881120 17881187 67 TTTTCTAAAAACAGAGGCACTGTTTTCTCTTTTCCTTCTTTTTTTTTTTAATATAAAATACTTGAGG chr4 + 94230402 77909738 77909737 77909803 77909738 77909737 77909803 66 TTTTCAAAAAATATAG-CATTATTGTCTCTCTCTCTCTTTTTTTTTTTTTCTTTAAAATCCTTGAAG .....x.....:.x..-..:.:..x.....:.::..::...........xx.x......x.....:. 16M1D50M 50/66 75.8% 66/94230402 0.0% 1/66 1.5% -60028617 -34201785 +3012 chr4 + 190214555 17881140 17881139 17881182 43 CTGTTTTCTCTTTTCCTTCTTTTTTTTTTTAATATAAAATACT chr4 + 94230402 52752938 52752937 52752980 52752938 52752937 52752980 43 CTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATT ..x.....:......:..:...............:.:....:. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -34871798 -59358604 +3001 chr4 + 190214555 17897199 17897198 17897268 70 TGATATACTGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGTATATACCTAGCA chr4 + 94230402 90392363 90392362 90392432 90392363 90392362 90392432 70 TAGTATGCTAAGCTTCCTCTGTTTTTTTTTGTGGTGGTTTTTTTTTTTTTTTTGGCTTACATACGTAGCA .::...:..:.x:.:::.:.x.........x.xx.xx................:.xx..:....x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -72495164 -21735238 +3218 chr4 + 190214555 17907758 17907757 17907830 73 TTTTATGTGTGGCCCAACACAACTCTTCTTCTTCCATTGTAGCCCGGGGAAGCCAAAAGGTTGGACACCCATG chr4 + 94230402 84344474 84344473 84344546 84344474 84344473 84344546 73 TCTTAGATGCAGCCCTAGGTAATTCCTATTCACTCATTGTGGCTCAGGGAAGACAGAAGGTTGGATAGTCCTG .:...x:..::....x.x::..:..:.x...x::......:..:.:......x..:.........:.x:.x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -66436716 -27793686 +3273 chr4 + 190214555 17940095 17940094 17940193 99 TATAGGTAGATATATGTGTGTGTATATATATATGT------ATAT----GTGTATATATATGTATATATGTATATATATGTATACATGTATATATATATATATACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....x:.:x:.:.x.x....x.::...x.......------....----.....:x....:....:..:x:..::x.x...:..:....:...:x....::..:..... 35M6I4M4I60M 68/99 68.7% 109/94230402 0.0% 10/99 10.1% -3169099 -91061303 +3952 chr4 + 190214555 17981608 17981607 17981680 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGCGAGGATCACCTGAACCCAGAAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::.......:x:x:.x.:.x...:............x..x:.....:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -58051597 -36178805 +3169 chr4 + 190214555 17998965 17998964 17999020 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:.:...:...x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 16503965 NA +3154 chr4 + 190214555 17998967 17998966 17999025 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.....:.....:x..:.:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -33473523 -60756879 +3224 chr4 + 190214555 17998967 17998966 17999018 52 AAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATATATA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:...............:.:..:.....:.:.x....::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 16503963 NA +3194 chr4 + 190214555 18010367 18010366 18010418 52 TGTATGGGTACATATATATATGTGTGTGTGTCTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857611 6857610 6857662 6857611 6857610 6857662 52 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA .:...:x.......::....x:.....................x..x.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 11152756 NA +3087 chr4 + 190214555 18010378 18010377 18010459 82 ATATATATATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATAT chr4 + 94230402 85834534 85834533 85834615 85834534 85834533 85834615 82 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x:..x.:...x.......x.........:.xx:.:..x::...::......x:..:..:.x....:.::::.::.:.:.. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% -67824156 -26406246 +3047 chr4 + 190214555 18010379 18010378 18010461 83 TATATATATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.....x...........:.xx..:..x::..::..:.:.:x...:....x.:.:::::::..:.:.:.. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% -67824154 -26406248 +3431 chr4 + 190214555 18010381 18010380 18010463 83 TATATATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x...x.............:.xx..:..x:::..::......x...::.:.x....:::::...:.:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -67824152 -26406250 +3646 chr4 + 190214555 18010383 18010382 18010487 105 TATATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATATATATTTGAGATGGAGTCTTGCTCTGT chr4 + 94230402 85834533 85834532 85834637 85834533 85834532 85834637 105 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGT ...x::.x.....x.x.................xx..:..x.:..::..:.:..x..::....x.:..:::.:...:.:.:..xxxxx:x...:.:..x:..... 105M 67/105 63.8% 105/94230402 0.0% 0/105 0.0% -67824150 -26406252 +3035 chr4 + 190214555 18010385 18010384 18010449 65 TATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGT chr4 + 94230402 79265520 79265519 79265584 79265520 79265519 79265584 65 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .:..........:x........xx...:....:...:.:..:..:.:::::.x.::...x.:... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -61255135 -32975267 +3482 chr4 + 190214555 18010385 18010384 18010476 92 TATGTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATATATATTTGAGATGGAG chr4 + 94230402 85834533 85834532 85834624 85834533 85834532 85834624 92 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGG ...x::.x.....................:...xx..:.:x:::..::...:..x:..::.:.x.:..:.:.:...:.:.:x..:xx...:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% -67824148 -26406254 +3130 chr4 + 190214555 18010388 18010387 18010458 71 GTGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ..........x..::........xx.:......:..::.:..:..:.:.::::x.::...x.....x:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -61255131 -32975271 +3146 chr4 + 190214555 18010395 18010394 18010464 70 TGTCTGTGTGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATATATA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x.x.............:.:...xx.....x.:..::....:.:x..::....x.:.::.:.:...:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -67824146 -26406256 +3679 chr4 + 190214555 18024081 18024080 18024163 83 ATCTCTCTTCTCTCTCTCTCTCTCTCTCACACACACACACACACAGACACACACGCACAGTGATGGAATAGGGACTAAATAGA chr4 + 94230402 75248046 75248045 75248128 75248046 75248045 75248128 83 ATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaa ...::..:..................x................x...x.x.x.x:x.x..x..x::..x.:.:.xx...x.:. 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% -57223965 -37006437 +3818 chr4 + 190214555 18024084 18024083 18024127 44 TCTCTTCTCTCTCTCTCTCTCTCTCACACACACACACACACAGA chr4 + 94230402 75248047 75248046 75248090 75248047 75248046 75248090 44 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACaga ..::.:...................................... 44M 41/44 93.2% 44/94230402 0.0% 0/44 0.0% -57223963 -37006439 +3222 chr4 + 190214555 18024086 18024085 18024125 40 TCTTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248086 75248047 75248046 75248086 40 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACA ..:.::.................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -57223961 -37006441 +3079 chr4 + 190214555 18024089 18024088 18024126 38 TCTCTCTCTCTCTCTCTCTCACACACACACACACACAG chr4 + 94230402 12601305 12601304 12601342 12601305 12601304 12601342 38 TCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG ..................x.....:..........x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 5422784 NA +3376 chr4 + 190214555 18024090 18024089 18024127 38 CTCTCTCTCTCTCTCTCTCACACACACACACACACAGA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA .........................:..........:. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 5422786 NA +3399 chr4 + 190214555 18055340 18055339 18055450 111 TTTCTCTCCCTCAACCAT-TTTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCTCTCCTTCCTTCCTTCCTCCTTTCCTCCTTCC--CTCACTCTTTCTTTCTTTTT chr4 + 94230402 33980813 33980812 33980926 33980813 33980812 33980926 114 TTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTT ...:x:...:x...x...-....:x...:x.....xx..::x......x......:.....x.x.....:::.::::....x...:.x...x--:.....::x:..:x:..... 18M1I73M2I20M 73/111 65.8% 114/94230402 0.0% 3/111 2.7% -15925473 -78304929 +3036 chr4 + 190214555 18055410 18055409 18055459 50 CCTTCCTCCTTTCCTCCTTCCCTCACTCTTTCTTTCTTTTTTCTTTTTTT chr4 + 94230402 70062265 70062264 70062314 70062265 70062264 70062314 50 CCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTT ......::x:.....x....:......:...:...:.......:..x... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -52006855 -42223547 +3049 chr4 + 190214555 18081398 18081397 18081456 59 GTACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -57951808 -36278594 +3007 chr4 + 190214555 18086049 18086048 18086110 62 AATCAATAAATGAAATTTATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCA chr4 + 94230402 7696555 7696554 7696616 7696555 7696554 7696616 62 AGTCACTGGATGAAATTTGACATATAAACAGACCTCAGCAGGAGAGCTATGTGATTATCTCA .:...x.::.........:x..:.........x..x.:x.x:.:.:.:.::........... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 10389494 NA +3012 chr4 + 190214555 18116421 18116420 18116476 56 TATATATATATATATATATATATATATATATATATATATAATTAAAAGTGTAAGAA chr4 + 94230402 51472510 51472509 51472565 51472510 51472509 51472565 56 TAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAA ..x.....:.......x.:.:.......:x..:.:....:.xx.......x..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -33356089 -60874313 +4600 chr4 + 190214555 18200414 18200413 18200584 171 AAAATGAGGATGCCCCACTGGTTTATGTTACAGCCTTATGGCATTTTT--TTCTATTCCCTATTTACTTCTTAATACAGCATAATT--TATGCACTTTTTTGATCGTGGCCATGCATTCAGCAAATGTCTTTATTGGGTGGTCCATAACAATGCCTGGATCTGTTTCCTGTGAGG chr4 + 94230402 42025758 42025757 42025916 42025758 42025757 42025916 159 AAGGTAAGGATGTAC-ATCAATTTATGTAACG---TTGTAATATTTTCCATAATATTCCCTAC------------ACAGCCTAAATATTATTCACTTTTTTGACCTCTGATACATTTTAAGCAGATGTCTTCATTGAGCTGTCTGCAGTGATGCCTAGATCTTTGTCCTGAGAGG ..::.:......:x.-.::::.......x..:---..:.:::.....:--.xx.........:------------.....x...x.--...x...........:.x:x.x:.:::x..x....:.......:....:.:x...:::.:::......:.....x.x.....x.... 15M1D16M3D13M2I13M12D11M2I87M 107/155 69.0% 159/94230402 0.0% 20/155 12.9% -23825344 -70405058 +3433 chr4 + 190214555 18207154 18207153 18207232 79 GTGGTGCATGCCTGTGGTTCCAGCTACTGGGATGGCTGAGATAGGAGGATGACTTGATCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--...:............x.:.x.......x:xx.x.:.xx......x.....:..x.:x:.....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -57826047 -36404355 +3461 chr4 + 190214555 18277198 18277197 18277270 73 TGCACCTGTAGTCCCAGCTACTAGGGAGGCTGGGGTAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........x.::......:.x:xx.x...x..........::.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -57756007 -36474395 +3258 chr4 + 190214555 18300625 18300624 18300708 84 TTTAACCTTCCTAGAAACCCTGAAAGGATGT---TATTATTATTTCCATTTCATAGATGAGAAAATTGAGATATAGAGAGGTTAAGT chr4 + 94230402 28016163 28016162 28016249 28016163 28016162 28016249 87 TTAAACCTTCCTGCACCTCTAGGAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ..x.........:x.xx:.:x.:.::x.x..---:.x.......:......:.:.....:::....:.x....:.......:.x... 31M3I53M 58/84 69.0% 87/94230402 0.0% 3/84 3.6% -9715538 -84514864 +3066 chr4 + 190214555 18367090 18367089 18367140 51 ATATATACACACACACACACACACACACACACACACACATACATACATACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .......:........x.x....:........::::.:.....x..x.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -27773766 -66456636 +3772 chr4 + 190214555 18368751 18368750 18368889 139 AAACAAACAACATTAAAAAAAGGGCAAAGAAGGGCATTGCATAATGATAAAAGGTTCAATTCAACAGGAAGACTTAACTATCCTACATGTATATACACACACACACACACACACATATATACACACACACACACACACA chr4 + 94230402 23247649 23247648 23247774 23247649 23247648 23247774 126 AAGCATAGCACACTACAAGGAAGAAAAGTATAAGCTGTGCTT---GGTAAGCTGAACAATCCAA---GATGACTTGAC-------CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:..x.xx...:..x..::.:.:x..:x.x::..xx...x.---.:...:xx.xx....:...---..x.....:..-------.....:.:..::........:x:.::x......:........:........... 42M3D19M3D11M7D54M 86/126 68.3% 126/94230402 0.0% 13/126 10.3% -4878898 -89351504 +3166 chr4 + 190214555 18368821 18368820 18368910 90 GACTTAACTATCCTACATGTATATACACACACACACACACACACATATATACACACACACACACACACACACACACACACACATAAAAAA chr4 + 94230402 47135160 47135159 47135249 47135160 47135159 47135249 90 GATCCAACTGTCTTTGCTGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACTCCTAAAAGA ..:::....:..:.xxx...:....::..:.....::x.:xx::x...:....:::.:::::::..........:.....x.x.....:. 90M 54/90 60.0% 90/94230402 0.0% 0/90 0.0% -28766339 -65464063 +3360 chr4 + 190214555 18368839 18368838 18368904 66 GTATATACACACACACACACACACACATATATACACACACACACACACACACACACACACACACAT chr4 + 94230402 54963190 54963189 54963255 54963190 54963189 54963255 66 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACAT ..x.:..:.:x..:...x.::.....x................xx...:::.:.x..:........ 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -36594351 -57636051 +3134 chr4 + 190214555 18368840 18368839 18368912 73 TATATACACACACACACACACACACATATATACACACACA--CACACACACACACACACACACACATAAAAAATT chr4 + 94230402 54963193 54963192 54963267 54963193 54963192 54963267 75 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATT .:....:x..:...x.::.....x:.....:.........--...:::.:.x..:.......:x:...x::.... 40M2I33M 51/73 69.9% 75/94230402 0.0% 2/73 2.7% -36594353 -57636049 +3042 chr4 + 190214555 18368983 18368982 18369056 74 CATATGCTCTATGTATATATGCGTATATATATACACCTATATAGGTGTGTATATATATACGTATATACACATAT chr4 + 94230402 42936194 42936193 42936267 42936194 42936193 42936267 74 CAAACACTTTATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATAT ..x.::..:...x.x.:x....:.:......:.:.....:...x:.:..:.x:.:.::..::.x....:..... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -24567211 -69663191 +3663 chr4 + 190214555 18369243 18369242 18369361 119 TACACATACGTATGTGTATATGTGTATATATACTGTATATATACACACATATATACGTATATACACATATATGTATATACGTATA--TGTGTGTATATGTATATATGTGTGTATATATGTG chr4 + 94230402 21109190 21109189 21109303 21109190 21109189 21109303 114 TGCTTATACATGTGTGTCTCTGTGGGCGTAT---TTATATGTACTCACATATACTCGTGTA----CCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .:.x:....:.:.....x.x....x:::...---x.....:...x........:x...:..----.x....:....:...x:..:--.x...........:...:x:.:..:..::.:::. 31M3D27M4D20M2I34M 77/112 68.8% 114/94230402 0.0% 9/112 8.0% -2739947 -91490455 +3227 chr4 + 190214555 18369288 18369287 18369346 59 CACATATATACGTATATACACATATATGTATATACGTATATGTGTGTATATGTATATAT chr4 + 94230402 28997789 28997788 28997847 28997789 28997788 28997847 59 CACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATATAAAT ......:....x.x..........:......xx::xx......:.......:....x.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -10628501 -83601901 +3122 chr4 + 190214555 18369325 18369324 18369410 86 ATATGTGTGTATATGTATATATGTGTGTATATATGTGCATATATATGTATATGTGTATATATGTATATATGTGTATATATGTCTAT chr4 + 94230402 66286775 66286774 66286860 66286775 66286774 66286860 86 ACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTAT .:.:.....x..:.:.:.:x.::.x..x.......x...:...:....::..:.x.::.:.:x.:.::.......:.:xx..x... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% -47917450 -46312952 +3795 chr4 + 190214555 18369388 18369387 18369509 122 TATATATGTGTATATATGTCTATATACGTATATATACACACATATAC----GTATATATGTGTATATATACATATATGTGTGTATATATACACACATATATGTATATAT---------GTATATATAGGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:......:.x.x...xx:::..:x.....:...x.........----...:x...::....:..:x...::x.x.........:.::.::x....:::.::.:.:---------..x.x.:.:......:. 47M4I58M9I17M 80/122 65.6% 135/94230402 0.0% 13/122 10.7% -2739806 -91490596 +3063 chr4 + 190214555 18369418 18369417 18369472 55 TATATACACACATATACGTATATATGTGTATATATACATATATGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:...:..:.....:..:.:.:.:.:...:...x:x...:..:............ 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -37325036 -56905366 +3217 chr4 + 190214555 18369428 18369427 18369520 93 CATATACGTATATATGTGTATATATACATATATGTGTGTATATATACACACATATATGTATATATGTATATATAGGTGTATATATGTATATAT chr4 + 94230402 89812968 89812967 89813060 89812968 89812967 89813060 93 CATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ......x:..x............x..x..::x.xx:.::..:.::.x..x.x:..::....:.x:x.:.:.:.:x............x..x.. 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% -71443540 -22786862 +3261 chr4 + 190214555 18369456 18369455 18369572 117 TATATGTGTGTATATATACACACATATATGTATATATGTATATATAGGTGTATATATGTATATATGTATGTGTATATATGTGCATATATATGTGTATATATGTATATATGTATATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .::.x.....:x:..:x:...:...x::...:.:::::x:.:.x.:x::::.:..x.:::.:....:..x..:..:.:.....::.x.::.....:.::...:.x..:...::.:.. 117M 63/117 53.8% 117/94230402 0.0% 0/117 0.0% 13155251 NA +3172 chr4 + 190214555 18369503 18369502 18369564 62 GTGTATATATGTATATATGTATGTGTATATATGTGCATATATATGTGTATATATGTATATAT chr4 + 94230402 40388218 40388217 40388279 40388218 40388217 40388279 62 GTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTAT ....:...:...x...x.::....:.::...........:.x.......xx.:....xx... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -22018715 -72211687 +3546 chr4 + 190214555 18369505 18369504 18369596 92 GTATATATGTATATATGTATGTGTATATATGTGCATATATATGTGTATATATGTATATATGTATATATGTGTATACACATATGTACACTTAT chr4 + 94230402 66286779 66286778 66286866 66286779 66286778 66286866 88 GTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCA----TGTGTACACCAGTGTATGCTTAT ..:.:x......:.:x::..x..x.......x...:...:.....:....x..:.:.:x...::.----...:.....xx:....::..... 65M4D23M 61/88 69.3% 88/94230402 0.0% 4/88 4.5% -47917274 -46313128 +3012 chr4 + 190214555 18369506 18369505 18369588 83 TATATATGTATATATGTATGTGTATATATGTGCATATATATGTGTATATATGTATATATGTATATATGTGTATACACATATGT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:.:.x...:.....:.:.:...::xx..:..x.::..:.......x...::.:.x....:::.:.:...:.::. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% -67465027 -26765375 +4165 chr4 + 190214555 18369680 18369679 18369789 110 TATACGTATATATCTATATATACGTATATATGTATACGTATATATACACGTATATATGTATATATCTATATATACGTATGTGTATATATACGTATATATGTGTATATATG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .....:.:.:.:...x.:.:x:.....x...:.:...x:.:......x...:..:x.:..::...x..:x:..:.x.x.........:.:::.:x.....::.::.:.:. 110M 69/110 62.7% 110/94230402 0.0% 0/110 0.0% -2739514 -91490888 +3306 chr4 + 190214555 18369718 18369717 18369788 71 TATATATACACGTATATATGTATATATCTATATATACGTATGTGTATATATACGTATATATGTGTATATAT chr4 + 94230402 41749096 41749095 41749166 41749096 41749095 41749166 71 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGT ......x....::.....x..x......x:...:.:.......:..:...:.:...:::x.:.:.x:..:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -23379378 -70851024 +3299 chr4 + 190214555 18369719 18369718 18369837 119 ATATATACACGTATATATGTATATATCTATATATACGTATGTGTATATATACGTATATATGTGTATATATGTGTGCGTATATATGTATATACGTATATATACACATATGCGTATATATA chr4 + 94230402 25906335 25906334 25906451 25906335 25906334 25906451 117 ATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCC--ATATATAAACACATGCTTATACATA ....x:.x..:.:x....x:x:...x.:.x.x....x.x..xx.x.x.x...:...x.:.x..:...:....:x:...::.:.:x.x...x.--.......x...:....x....:... 92M2D25M 76/117 65.0% 117/94230402 0.0% 2/117 1.7% -7536616 -86693786 +4209 chr4 + 190214555 18369765 18369764 18369900 136 ATATACGTATATATGTGTATATATGTGTGCGTATATATGTATATACGTATATATACACATATGCGTATATATACACATATATACACACATATATACACATATACGTGTATATATGTGTATACATGTGTATATACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTAT--------------------ATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x.:.x....:......:.x.x....x......x...--------------------..:.:.x:.:......x.:.:..:x:.:..:...:...x...::x:x...:...........:x..:..:..::.... 38M20D78M 80/116 69.0% 116/94230402 0.0% 20/116 17.2% -2739422 -91490980 +3227 chr4 + 190214555 18369817 18369816 18369891 75 ATACACATATGCGTATATATACACATATATACACACATATATACACATATACGTGTATATATGTGTATACATGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:........x.::..::.x......::.....x.x....:..:.:x.:.::........:::..:.:::.x... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -4230381 -90000021 +3042 chr4 + 190214555 18369893 18369892 18369945 53 ATATACACACACATATATATACACACACAGATATGTACATATATATATGTATA chr4 + 94230402 74526074 74526073 74526126 74526074 74526073 74526126 53 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..x:.........:.:..:x...:.....:....:...:.......:.:.x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -56156181 -38074221 +3013 chr4 + 190214555 18370981 18370980 18371032 52 CAACAACAACAACAACAAAAAAAAGCCACAGACCTGACGAATTCACAGCTGG chr4 + 94230402 38686048 38686047 38686099 38686048 38686047 38686099 52 CAACAACAACAACAACAAAAAAACCCCAAACAGCTCATGATTTCACAGCCAG .......................xx...x.x.x..x.:..x........::. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -20315067 -73915335 +3173 chr4 + 190214555 18376470 18376469 18376537 68 TTTCTGTTTTTCTTCTCTCCCTCTCTCTCCCCTATGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTCTT chr4 + 94230402 15438538 15438537 15438605 15438538 15438537 15438605 68 TTTGTGATTTTCATTTCTCTCTCTCTCTTTTTTTTTTTCCTTTGGACAGTTGTTTGTTTTGTTTTGTT ...x..x.....x.:....:........::::.x.x..::....xx::x................x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 2937932 NA +3059 chr4 + 190214555 18391742 18391741 18391795 54 GAAATAAGCACTTTTTTTTCTTTTCTTTTTTTTTTTTTTTAAGACAGAGGTTTG chr4 + 94230402 28615150 28615149 28615202 28615150 28615149 28615202 53 GAAATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTTAAG-CAAAGCTCTG .....x.::.:..:....:.:......................-..:..x.:.. 43M1D10M 43/53 81.1% 53/94230402 0.0% 1/53 1.9% -10223408 -84006994 +3054 chr4 + 190214555 18391752 18391751 18391789 38 CTTTTTTTTCTTTTCTTTTTTTTTTTTTTTAAGACAGA chr4 + 94230402 52752938 52752937 52752975 52752938 52752937 52752975 38 CTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGA .......::.......................x..... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -34361186 -59869216 +3112 chr4 + 190214555 18395392 18395391 18395446 55 AGTATTATTATCTCCATTTTACAGATGGAGAAACTGAGGCTCAGAGAGGTGAAGT chr4 + 94230402 28016195 28016194 28016249 28016195 28016194 28016249 55 AGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ..:.x......::....................::.x.::x........:xx... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -9620803 -84609599 +3701 chr4 + 190214555 18401205 18401204 18401295 91 GATTCTAGCCAAATTACTTAAACTCTCTAAACTTCTGTTTTCTCATCTATAAAATGGAGTTAAGAGTTG-TACTAAACTTGCTGGGTTGTTG chr4 + 94230402 83501141 83501140 83501232 83501141 83501140 83501232 92 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTG ..:...:.x............x..x.x.:x:.:..x......:..:..:..........:.:.x...x:-...:x.x..::.x...x.:... 69M1I22M 64/91 70.3% 92/94230402 0.0% 1/91 1.1% -65099936 -29130466 +3287 chr4 + 190214555 18412124 18412123 18412224 101 TTTCTTCTCTCTTTCTATTCTTTCTT-TCTTTTTCTTCTCTTTCTTTCTATGCTTTCTTGCTTGCTTTCTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895602 32895601 32895702 32895602 32895601 32895702 101 TCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCA-GCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .:..:...:....:.....:....:.-..x..:...x:x:.....x::x:.x..x..x-..x.x:::..x:........x:.x......x.....:...... 26M1I31M1D43M 68/100 68.0% 101/94230402 0.0% 2/100 2.0% -14483478 -79746924 +3140 chr4 + 190214555 18412157 18412156 18412228 72 CTTCTCTTTCTTTCTATGCTTTCTTGCTTGCTTTCTTCTTTCTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTC chr4 + 94230402 26415985 26415984 26416058 26415985 26415984 26416058 74 CTTTTTTTTCTTCCTCCACTTACTTGCCTGACTTTTGTTTTCTTTTTCTACCTTTCTTTGGCCTCCTTCTATTC ...:.:......:..x::...x.....:..x:..:.x:.....:.....x:........--.:.:...::x... 59M2I13M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% -8003828 -86226574 +3369 chr4 + 190214555 18412162 18412161 18412289 128 CTTTCTTTCTATGCTTTCTTGCTTGCTTTCTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGT---------TTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..x.x.....:x.:x.---------.........:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:::.::..:..:..:..:...:.......::. 24M9D95M 74/119 62.2% 119/94230402 0.0% 9/119 7.6% -45284955 -48945447 +3602 chr4 + 190214555 18412167 18412166 18412308 142 TTTCTATGCTTTCTTGCTTGCTTT--------------------CTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTT chr4 + 94230402 63697073 63697072 63697238 63697073 63697072 63697238 166 TTTCCATGCTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTTATT ....:..........::.xxx...--------------------...:x...:::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:------..x...::.:x.xx:...:..--..:..:..:..:...:........:.x.. 24M20I66M6I21M2D29M 92/140 65.7% 166/94230402 0.0% 28/140 20.0% -45284906 -48945496 +3282 chr4 + 190214555 18412187 18412186 18412293 107 CTTTCTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTTC-----CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTT ....x...:.:::.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....---------....x:..:...-----...:..--..:..:..:..:...:.......::. 61M9I12M5I6M2D26M 72/105 68.6% 119/94230402 0.0% 16/105 15.2% -45284930 -48945472 +3076 chr4 + 190214555 18412200 18412199 18412308 109 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:------.:..x...::.:x.xx:...:..--..:..:..:..:...:...:..... 18M5I41M6I23M2D25M 71/107 66.4% 118/94230402 0.0% 13/107 12.1% -45284917 -48945485 +3076 chr4 + 190214555 18423541 18423540 18423592 52 TCTCTTCTATACCTTCTGCTACCTCCTTTTCCACTTAGCCACACTTCAGGCT chr4 + 94230402 22200350 22200349 22200401 22200350 22200349 22200401 52 TTTTCTCTACATCTTTCACTGCTTTCTTTTCCATTCAGCCACACTTCAGTCT .:.::....:.:...:::..:.:.:........:.:.............x.. 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% -3776809 -90453593 +3106 chr4 + 190214555 18469613 18469612 18469703 91 ATTGCACTCCAACCTCCATCACAAAAAACAAACAAACAAACAAACAAAAAACAAAAAAAAAAACCTCATATGAAAAACATTTTTACTGAAA chr4 + 94230402 38080820 38080819 38080909 38080820 38080819 38080909 90 ACTGCACCTAAACCTGGAGTAAAAAAAACAAGCAAACAAACAAAAAAAAACCCAACAACAAATCATCCT-TGAGCACCATGACTCCAGAAA .:.....::x.....xx.x:.x.........:............x.....x.x..x..x...x.x..x.-...:x.x...xx:.x.x.... 69M1D21M 64/90 71.1% 90/94230402 0.0% 1/90 1.1% -19611207 -74619195 +3052 chr4 + 190214555 18469635 18469634 18469680 46 AAAAAACAAACAAACAAACAAACAAAAAACAAAAAAAAAAACCTCA chr4 + 94230402 22620560 22620559 22620605 22620560 22620559 22620605 46 AAGGAAAAAACAAACAAACAAACAAGAAACAACAAAAAACAGCTCA ..::..x..................:......x......x.x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -4150925 -90079477 +3007 chr4 + 190214555 18476553 18476552 18476603 51 ATTACCTCTACCTTGTCCTGCCCTTGACTCATGGGGATTATGGGGATTACA chr4 + 94230402 80485507 80485506 80485557 80485507 80485506 80485557 51 ACTCCCTCTACCTTGTCTTGTCCTTGAAGCATGGAGGCCAAAGGGATTACA .:.x.............:..:......xx.....:.:::.x:......... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -62008954 -32221448 +3124 chr4 + 190214555 18506744 18506743 18506797 54 AACTCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAGAAAAAGA chr4 + 94230402 27719988 27719987 27720041 27719988 27719987 27720041 54 AACTACTTTAAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGA ....x.x.:..:..:....:.::.....:..........:.....x:...:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -9213244 -85017158 +3193 chr4 + 190214555 18516288 18516287 18516347 60 AAAACAAACAAACAAACAACCAAAAAACAAAAAAAAAAAAACAAAAAAACAGTAAGGCAG chr4 + 94230402 90772862 90772861 90772921 90772862 90772861 90772921 60 AAAACAAACAAACAAACAACAAAACAGCAAAAAAGAAAGTGCAGAAATGAAGTGGAGGAG ....................x...x.:.......:...:x:..:...x:x...:::.x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -72256574 -21973828 +3300 chr4 + 190214555 18534750 18534749 18534811 62 TTTATATTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA chr4 + 94230402 4618346 4618345 4618407 4618346 4618345 4618407 62 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .:.x.x...:..::.x.......::..............::x...::......x.x...... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 13916404 NA +3040 chr4 + 190214555 18534762 18534761 18534832 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATGTTGCTCTCTCTCTCTCTCT chr4 + 94230402 26578268 26578267 26578338 26578268 26578267 26578338 71 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCT ...................:.:.:.:.x.xx:...:...:.x.:..::.:..xx::..:....x::.:... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -8043506 -86186896 +3049 chr4 + 190214555 18534762 18534761 18534807 46 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618362 4618361 4618407 4618362 4618361 4618407 46 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .......::..............x:....::......x.x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 13916400 NA +3131 chr4 + 190214555 18534762 18534761 18534868 107 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATGTTGCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATATCTGTATCTATAT chr4 + 94230402 26578266 26578265 26578371 26578266 26578265 26578371 106 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCTTGGTGCA-GTAAGTAAACATACTGGTCTTCATAT .:...................:.:.:.x.x.xx:...:...:.x.:..::...x.xx:..:....x::.:...:x:.::.-:..x:..x::...::x..x.::.... 80M1D26M 65/106 61.3% 106/94230402 0.0% 1/106 0.9% -8043504 -86186898 +3338 chr4 + 190214555 18534766 18534765 18534883 118 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATGTTGCTCTCTCTCTCTCTCTCTCTATATATATATATA-----TGTATATCTGTATCTATATATCCTGTTGGTTCTG chr4 + 94230402 60831530 60831529 60831638 60831530 60831529 60831638 109 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACA---CGCACACT-----------TCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCTCATAAGATCTG ...x.....x.............:.:.......:.:....:.:.:.---:..x.x..-----------....x...:..x....-----...::::x...:.x.....x..:::.x:.x.... 46M3D8M11D16M5I34M 75/104 72.1% 109/94230402 0.0% 19/104 18.3% -42296764 -51933638 +3449 chr4 + 190214555 18536191 18536190 18536310 120 CCTTCCTCCATTCCTCCCTCCCTCCCTCCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCT-CCCTCCCTCCCTCCCTCCC chr4 + 94230402 92917621 92917620 92917741 92917621 92917620 92917741 121 CCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC ..x...:..x...:x..:.::::.:...x......:...:.......::.:..:..xxx.x:.:..:.::...x.:xxx...x:.:.::.x:::x:..:..-:..x.::.........x.. 101M1I19M 71/120 59.2% 121/94230402 0.0% 1/120 0.8% -74381430 -19848972 +3231 chr4 + 190214555 18536216 18536215 18536318 103 CTCCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCCTCCCTCCCTCCCTCCCT-----CCTTCCCTCCCTCCC---TCCCTCCCTCCCTC------CCTCCCTCCCTCCCTCCCTTCC chr4 + 94230402 92917625 92917624 92917741 92917625 92917624 92917741 117 CCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .:.....:..x..:.::::.:...x..:...:...:.......::.:..:..-----:....:.::...x.:---.:.x.::....x..------.:x:..x.::.........x.. 52M5I15M3I14M6I22M 68/103 66.0% 117/94230402 0.0% 14/103 13.6% -74381409 -19848993 +3262 chr4 + 190214555 18579586 18579585 18579624 39 ATGCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA .:....................x.....:.......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 5978285 NA +3224 chr4 + 190214555 18579589 18579588 18579624 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa ...................x................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -56668464 -37561938 +3139 chr4 + 190214555 18579591 18579590 18579630 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -56668458 -37561944 +3316 chr4 + 190214555 18579591 18579590 18579626 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 5978287 NA +3438 chr4 + 190214555 18579591 18579590 18579626 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% -56668462 -37561940 +3211 chr4 + 190214555 18596241 18596240 18596328 88 ATACAGACAATGTGGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACATATATA---TATACACACACATATATATAT chr4 + 94230402 83316540 83316539 83316630 83316540 83316539 83316630 91 ATGCATGCAGTCTTGGGAGTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAATCTGGACAGATATGTGTAT ..:..x:..:.x.x.x.x...x:..x.x..:.............:.x...:..:.:.......:...---x..x::x...x....:.:... 67M3I21M 61/88 69.3% 91/94230402 0.0% 3/88 3.4% -64720299 -29510103 +3136 chr4 + 190214555 18596253 18596252 18596311 59 TGGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACATATATATATA chr4 + 94230402 68837085 68837084 68837143 68837085 68837084 68837143 59 TGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA ....:x.x::.....:.............:.:.:.x...:...:.....:..::.:.:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -50240832 -43989570 +3029 chr4 + 190214555 18596288 18596287 18596340 53 TATATATATATACATATATATATACACACACATATATATATAGACAATATGTG chr4 + 94230402 74404244 74404243 74404296 74404244 74404243 74404296 53 TATATATATATAGATATATGCATTCACATACAAAGATAAAAAGAAAATATGTG ............x......::..x....:...x.x...x.x...x........ 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -55807956 -38422446 +3230 chr4 + 190214555 18611704 18611703 18611785 82 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG----------GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::.....:...............x...----------...::....:..x...x:x.::xx....x... 40M10D32M 53/72 73.6% 72/94230402 0.0% 10/72 13.9% 7936283 NA +9040 chr4 + 190214555 18611713 18611712 18611984 272 GGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAG---------GGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAGGTGAAAGGGAGTGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAG-GGGGGAGAAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAG chr4 + 94230402 1500700 1500699 1500971 1500700 1500699 1500971 272 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAG---TGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatgg-------agaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG ..:.::::....:....x.......:....---x..:....:.......::..:x...:::::.::.::x...:.---------....:.x:.........:::x...::..::..:...:..:..x..x.:x::::......::....x.:::..::.x........::::...:...::::.-------:.:...:....:.:.......-..::.:....:...::.::::.xx.:.:...:.:...:::::x....:....x......:.::.:.... 30M3D42M9I100M7D21M1I69M 163/262 62.2% 272/94230402 0.0% 20/262 7.6% 17111013 NA +3253 chr4 + 190214555 18611728 18611727 18611797 70 GGAGGGGGGAGGAAGGAAGGAAGG-------------GAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837200 3837199 3837282 3837200 3837199 3837282 83 GGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ....:::..:....::..x..::.-------------.x:........:....:........:..::..:::......:.... 24M13I46M 50/70 71.4% 83/94230402 0.0% 13/70 18.6% 14774528 NA +3115 chr4 + 190214555 18611737 18611736 18611783 47 AGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAA chr4 + 94230402 40414747 40414746 40414793 40414747 40414746 40414793 47 AGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA .....::..::.:...:...:.:...:.........:.......:.. 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% -21803010 -72427392 +3365 chr4 + 190214555 18611742 18611741 18611796 55 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGA chr4 + 94230402 10675421 10675420 10675475 10675421 10675420 10675475 55 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGA ..:.:....:...::.....:...............x...::....::.::.x.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 7936321 NA +3285 chr4 + 190214555 18611746 18611745 18611815 70 GGAAGGGAGGGAGGAAGGAAGGAGGG---------------GGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837198 3837197 3837282 3837198 3837197 3837282 85 GGGGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ..:::.:.:..:....::..x...:.---------------:........:....:........:..::..:::......:.... 26M15I44M 50/70 71.4% 85/94230402 0.0% 15/70 21.4% 14774548 NA +3260 chr4 + 190214555 18611853 18611852 18612005 153 TGAAAGGGAGTGAGGAAGGAAGGAAAGG-----------AAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAGGGGGGAGAAAGGAAGGAAGGGAGGGAGGAAGGAAGG---------------------AGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAA chr4 + 94230402 40414609 40414608 40414793 40414609 40414608 40414793 185 TGCGGGGGGATGGGGCGGGGAGGCAGGGTATGAGATTTCAGGACACAAATGTCAGGAAGGTGGGAGGAAGCAGCCCCGGAGCGCGAGATGGATGGAAACAATACAGCCGGCGCTCCCCGGCTATATTATTAAAATTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA ..x::...::..:..x:..:...x.:..-----------.:.:..x:..x.xx:......x.........x.:xxxx....x:x.::.x.:.x...::x.:x.x:.xx..---------------------.::xx::.....::..::.:...:...:.:...:.........:.......:.. 28M11I71M21I54M 93/153 60.8% 185/94230402 0.0% 32/153 20.9% -21802756 -72427646 +3230 chr4 + 190214555 18611926 18611925 18612007 82 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG----------GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::.....:...............x...----------...::....:..x...x:x.::xx....x... 40M10D32M 53/72 73.6% 72/94230402 0.0% 10/72 13.9% 7936505 NA +8966 chr4 + 190214555 18611935 18611934 18612222 288 GGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAGGTGAAAGGGAGGGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAG-GGGGGAGAAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAG chr4 + 94230402 1500700 1500699 1500971 1500700 1500699 1500971 272 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAG---TGAGGGGAAGGAGGAAAAAAACAGG-----AAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaa--aatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatgg-------agaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG ..:.::::....:....x.......:....---x..:....:.......::..:x...-----::.....:::.x:....:x..x:x:...:.::x::.........--:.x...:::.::..:...:..:..x..:.:x.::::.....::....x.:::..::.:........::::...:...::::.-------:.:...:....:.:.......-..::.:....:...::.::::.xx.:.:...:.:...:::::x....:....x......:.::.:.... 30M3D25M5D44M2D82M7D21M1I69M 168/271 62.0% 272/94230402 0.0% 18/271 6.6% 17111235 NA +3253 chr4 + 190214555 18611950 18611949 18612019 70 GGAGGGGGGAGGAAGGAAGGAAGG-------------GAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837200 3837199 3837282 3837200 3837199 3837282 83 GGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ....:::..:....::..x..::.-------------.x:........:....:........:..::..:::......:.... 24M13I46M 50/70 71.4% 83/94230402 0.0% 13/70 18.6% 14774750 NA +3365 chr4 + 190214555 18611964 18611963 18612018 55 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGA chr4 + 94230402 10675421 10675420 10675475 10675421 10675420 10675475 55 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGA ..:.:....:...::.....:...............x...::....::.::.x.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 7936543 NA +3285 chr4 + 190214555 18611968 18611967 18612037 70 GGAAGGGAGGGAGGAAGGAAGGAGGG---------------GGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837198 3837197 3837282 3837198 3837197 3837282 85 GGGGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ..:::.:.:..:....::..x...:.---------------:........:....:........:..::..:::......:.... 26M15I44M 50/70 71.4% 85/94230402 0.0% 15/70 21.4% 14774770 NA +3298 chr4 + 190214555 18612010 18612009 18612100 91 GGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAG-GTGAAAGGGAG chr4 + 94230402 75729450 75729449 75729541 75729450 75729449 75729541 92 GAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGGAGAATTAAATGGGAGCAAGCTAAAGGCAGGGGGACAGAATCAAAAGGAG .:.:..x:..:x.....:.......:..:..:.......:.....:.xx:..x.:..:x::.xx:....x...::.:x..-:.x...:.... 80M1I11M 59/91 64.8% 92/94230402 0.0% 1/91 1.1% -57117440 -37112962 +3230 chr4 + 190214555 18612164 18612163 18612245 82 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG----------GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::.....:...............x...----------...::....:..x...x:x.::xx....x... 40M10D32M 53/72 73.6% 72/94230402 0.0% 10/72 13.9% 7936743 NA +8966 chr4 + 190214555 18612173 18612172 18612460 288 GGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAGGTGAAAGGGAGGGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAG-GGGGGAGAAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAG chr4 + 94230402 1500700 1500699 1500971 1500700 1500699 1500971 272 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAG---TGAGGGGAAGGAGGAAAAAAACAGG-----AAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaa--aatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatgg-------agaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG ..:.::::....:....x.......:....---x..:....:.......::..:x...-----::.....:::.x:....:x..x:x:...:.::x::.........--:.x...:::.::..:...:..:..x..:.:x.::::.....::....x.:::..::.:........::::...:...::::.-------:.:...:....:.:.......-..::.:....:...::.::::.xx.:.:...:.:...:::::x....:....x......:.::.:.... 30M3D25M5D44M2D82M7D21M1I69M 168/271 62.0% 272/94230402 0.0% 18/271 6.6% 17111473 NA +3253 chr4 + 190214555 18612188 18612187 18612257 70 GGAGGGGGGAGGAAGGAAGGAAGG-------------GAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837200 3837199 3837282 3837200 3837199 3837282 83 GGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ....:::..:....::..x..::.-------------.x:........:....:........:..::..:::......:.... 24M13I46M 50/70 71.4% 83/94230402 0.0% 13/70 18.6% 14774988 NA +3115 chr4 + 190214555 18612197 18612196 18612243 47 AGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAA chr4 + 94230402 40414747 40414746 40414793 40414747 40414746 40414793 47 AGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA .....::..::.:...:...:.:...:.........:.......:.. 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% -21802550 -72427852 +3365 chr4 + 190214555 18612202 18612201 18612256 55 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGA chr4 + 94230402 10675421 10675420 10675475 10675421 10675420 10675475 55 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGA ..:.:....:...::.....:...............x...::....::.::.x.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 7936781 NA +3285 chr4 + 190214555 18612206 18612205 18612275 70 GGAAGGGAGGGAGGAAGGAAGGAGGG---------------GGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837198 3837197 3837282 3837198 3837197 3837282 85 GGGGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ..:::.:.:..:....::..x...:.---------------:........:....:........:..::..:::......:.... 26M15I44M 50/70 71.4% 85/94230402 0.0% 15/70 21.4% 14775008 NA +3298 chr4 + 190214555 18612248 18612247 18612338 91 GGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAG-GTGAAAGGGAG chr4 + 94230402 75729450 75729449 75729541 75729450 75729449 75729541 92 GAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGGAGAATTAAATGGGAGCAAGCTAAAGGCAGGGGGACAGAATCAAAAGGAG .:.:..x:..:x.....:.......:..:..:.......:.....:.xx:..x.:..:x::.xx:....x...::.:x..-:.x...:.... 80M1I11M 59/91 64.8% 92/94230402 0.0% 1/91 1.1% -57117202 -37113200 +4013 chr4 + 190214555 18612388 18612387 18612528 141 GAAGGGGGGAGAAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGG-----AGGAAGGAAGGAAGGGAGGGAG--GAAGGAAGGAGGGGG--------GAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAGGAAAGAAGGAAGGAA chr4 + 94230402 32265469 32265468 32265624 32265469 32265468 32265624 156 GGAGGGTGGTGCTGGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAA .:....x..x.xx:.:x.:.::....x.x...:..x.x....:..:.-----:x..:.::x.x:....:.....--x::........::x.--------.x.........:..:....:::.x:.:........:.:........:x.:x.::... 47M5I22M2I15M8I57M 91/141 64.5% 156/94230402 0.0% 15/141 10.6% -13653081 -80577321 +3230 chr4 + 190214555 18612402 18612401 18612483 82 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG----------GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::.....:...............x...----------...::....:..x...x:x.::xx....x... 40M10D32M 53/72 73.6% 72/94230402 0.0% 10/72 13.9% 7936981 NA +3230 chr4 + 190214555 18612426 18612425 18612600 175 GGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGG---AAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAGGAAAGAAGGAAGGAAGGGAG----GGAGGGAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAA chr4 + 94230402 40414612 40414611 40414793 40414612 40414611 40414793 182 GGGGGGATGGGGCGGGGAGGCAGGGTATGAGATTTCAGGACACAAATGTCAGGAAGGTGGGAGGAAGCAGCCCCGGAGCGCGAGATGGATGGAAACAATACAGCCGGCGCTCCCCGGCTATATTATTAAAATTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA ..:...:x.:..x:..:...x....x:x...:---x....x:x.::x.xx.......x:...:.:..x.:xx.x..::x.x::..x...x.....x..x:x..xx:.x.xx----..xx:x.xx.xx:.::xx::.....::..::.:...:...:.:...:.........:.......:.. 32M3I76M4I67M 101/175 57.7% 182/94230402 0.0% 7/175 4.0% -21802186 -72428216 +3115 chr4 + 190214555 18612435 18612434 18612481 47 AGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAA chr4 + 94230402 40414747 40414746 40414793 40414747 40414746 40414793 47 AGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA .....::..::.:...:...:.:...:.........:.......:.. 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% -21802312 -72428090 +3224 chr4 + 190214555 18612440 18612439 18612492 53 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAA chr4 + 94230402 10675421 10675420 10675472 10675421 10675420 10675472 52 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG-GGGGAGAAGAAA ..:.:....:...::.....:...............x...-:..:..:..... 40M1D12M 42/52 80.8% 52/94230402 0.0% 1/52 1.9% 7937019 NA +3108 chr4 + 190214555 18612521 18612520 18612602 82 GGAAGGAAGGGAGGGAGGGAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG----------GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::...:.:...............x...----------...::....:..x...x:x.::xx....x... 40M10D32M 52/72 72.2% 72/94230402 0.0% 10/72 13.9% 7937100 NA +3253 chr4 + 190214555 18612545 18612544 18612614 70 GGAGGGGGGAGGAAGGAAGGAAGG-------------GAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAA chr4 + 94230402 3837200 3837199 3837282 3837200 3837199 3837282 83 GGAGAAAGGGGGAAAAAATGAGAGTCATTTTTTTGCAGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ....:::..:....::..x..::.-------------.x:........:....:........:..::..:::......:.... 24M13I46M 50/70 71.4% 83/94230402 0.0% 13/70 18.6% 14775345 NA +4143 chr4 + 190214555 18612545 18612544 18612689 145 GGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGA----GGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAAGGAGGAAGGAGAAAGGCAGAGAGGGAGGAAGGAAGGAAA chr4 + 94230402 32265469 32265468 32265613 32265469 32265468 32265613 145 GGAGGGTGGTGCTGGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAA----GAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAA ......x..x.xx:.:x.:.::....x.x...:..x.x....:..:.x----.x:....:x.x.:....:...:xxx:..:.:.:::..x...x.x:x:.x........----.:..:....:::.x:..........:.:........ 48M4I57M4D36M 90/141 63.8% 145/94230402 0.0% 8/141 5.7% -13652924 -80577478 +3474 chr4 + 190214555 18612559 18612558 18612635 77 GGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG-----GGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....:...::.....:...............x...-----....:..:...:x:..x.x.::xx....:... 40M5D32M 53/72 73.6% 72/94230402 0.0% 5/72 6.9% 7937138 NA +3191 chr4 + 190214555 18633169 18633168 18633280 112 GTGCAACTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATCACTTTAAACGGGGAGGCAGAGGTTGCAG----TGA-GCCAAGATAGTGTCATTGCACT----------CCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGT--GTGCCCTAAGCCTGCTCCCAGCATGGTGAC .....xx......:...........::........x.xx.x...x.....x..x.x:.:..x:xx:..:..:..----...-......xx::...--x...x..----------.....x....... 74M4I3M1I13M2D7M10I13M 81/110 73.6% 125/94230402 0.0% 17/110 15.5% -57400035 -36830367 +3173 chr4 + 190214555 18663821 18663820 18663876 56 AAAAAGAAATGAAAAAAAAAAAAAAAAAAAAAAAACAAAGAAGAAGAAGGAGAAAA chr4 + 94230402 1046819 1046818 1046874 1046819 1046818 1046874 56 AAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAA ...:...x.:x.......:......:........x.:.:....:..::.:.:.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 17617002 NA +3018 chr4 + 190214555 18663830 18663829 18663900 71 TGAAAAAAAAAAAAAAAAAAAAAAAACAAAGAAGAAGAAGGAGAAAAACCTAGTG-GGGGAAAGAAGAAATA chr4 + 94230402 54037028 54037027 54037099 54037028 54037027 54037099 72 TGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACA ..:.::.....:..............x.:x....:xx:.....x....xx...x.-.:.:.....x....:. 55M1I16M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% -35373198 -58857204 +3146 chr4 + 190214555 18665900 18665899 18665940 41 TCTCGGGAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAGT chr4 + 94230402 30452104 30452103 30452144 30452104 30452103 30452144 41 TTCCAGGAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAGT .::.:...............:................x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -11786204 -82444198 +3095 chr4 + 190214555 18665903 18665902 18665948 46 CGGGAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAGTGTAATGCC chr4 + 94230402 75300455 75300454 75300500 75300455 75300454 75300500 46 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATC .:::................................:.x:.:.::. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -56634552 -37595850 +3131 chr4 + 190214555 18691032 18691031 18691080 49 AGAAACTTAAAAAAAAAAACAAAAACACAACAAAACAAAACAAAAACAC chr4 + 94230402 56539034 56539033 56539082 56539034 56539033 56539082 49 AAGAACGCAAAAAAAAAAAAAAAAACACCCCAAAACAAAAAAAAAACAC .::...x:...........x........xx..........x........ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -37848002 -56382400 +3507 chr4 + 190214555 18695306 18695305 18695378 73 ATTCTTTCTCTGTGTGTGTGTGTGTGTATATATATACACACACACACATGCACGAGAAAAGATATATATATAT chr4 + 94230402 64752815 64752814 64752872 64752815 64752814 64752872 58 ATTTTTTCTATACGTGTGTGTGTGTGTATATATACAAACACAC---------------aaaatatatatatat ...:.....x.::.....................:.x......---------------..:............ 43M15D15M 51/58 87.9% 58/94230402 0.0% 15/58 25.9% -46057509 -48172893 +3064 chr4 + 190214555 18695319 18695318 18695366 48 GTGTGTGTGTGTGTATATATATACACACACACACATGCACGAGAAAAG chr4 + 94230402 49483587 49483586 49483634 49483587 49483586 49483634 48 GTGTGTATGTGTTTATAAATACATGCACACACACACGCACGCGTAAAG ......:.....x....x...:.::..........:.....x.x.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -30788268 -63442134 +3171 chr4 + 190214555 18696619 18696618 18696698 80 TCAATATGTATATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATGGAGAAA chr4 + 94230402 46063294 46063293 46063373 46063294 46063293 46063373 80 TTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAA .:.x:..::..:...:::.....:..x.::::....:..:...:.x......:......:xxx.......:.x..x.x.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% -27366675 -66863727 +3045 chr4 + 190214555 18696622 18696621 18696692 71 ATATGTATATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATG chr4 + 94230402 39937176 39937175 39937246 39937176 39937175 39937246 71 ATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTG ....:...:.....::...x......::xxx.:..:...:xxx:...:.:...:.......:...x..:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -21240554 -72989848 +3198 chr4 + 190214555 18696623 18696622 18696692 70 TATGTATATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATG chr4 + 94230402 39937175 39937174 39937244 39937175 39937174 39937244 70 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATG ...:...........::...x......::xx:.x..:...:xxx:...:.:...:.......:...x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -21240552 -72989850 +3310 chr4 + 190214555 18696623 18696622 18696689 67 TATGTATATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834599 85834533 85834532 85834599 67 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ...x:..x.....x.................x.xx..:..x::...:....:..x...:..:.x... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -67137910 -27092492 +3196 chr4 + 190214555 18696629 18696628 18696690 62 TATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834602 85834541 85834540 85834602 62 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .:...x.................:.:x..:..x::...:....:..x...:..:.x...::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -67137912 -27092490 +3224 chr4 + 190214555 18696629 18696628 18696727 99 TATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATGGAGAAAAAGAATATATATACATACTCCTTTTCTCT chr4 + 94230402 79265520 79265519 79265618 79265520 79265519 79265618 99 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTT .:..........::........xx.x......:...:.::.:.::.:.:::.x.:....x.:..xxx.x..x:xx.x......x..:.x.:..x:..:. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% -60568891 -33661511 +3271 chr4 + 190214555 18696630 18696629 18696692 63 ATGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATG chr4 + 94230402 85834538 85834537 85834600 85834538 85834537 85834600 63 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG ..x.....x...............x...xx..:..x::...:....:..x...:..:.x.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -67137908 -27092494 +3287 chr4 + 190214555 18696631 18696630 18696692 62 TGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATG chr4 + 94230402 79265520 79265519 79265581 79265520 79265519 79265581 62 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTG ............::........x..:......:...:.::.:.::.:.:::.x.:....x.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -60568889 -33661513 +3084 chr4 + 190214555 18704625 18704624 18704697 73 TCCTCCCTCCCTCCTTCCCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 42359316 42359315 42359388 42359316 42359315 42359388 73 TCGTTCCTCTAGACCACCTTCTTTTCCCTCTTCTCTGTTATTTTCTTTCTTCTTTTTTTCATTCAGCTTTTTT ..x.:....:xxx.:x..:.....::::....:...x..x...............:....x..:xx:..:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -23654691 -70575711 +3096 chr4 + 190214555 18704635 18704634 18704723 89 CTCCTTCCCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 61949700 61949699 61949788 61949700 61949699 61949788 89 CCCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTT .:.:..:.:.:xxx..:.x..x:.x.x:..:....x.x..:.x.:...x:.:....:xx:x:...................:...:... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -43245065 -50985337 +3059 chr4 + 190214555 18704644 18704643 18704748 105 TCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x...::.....::.::.x....:.:::x..x....:.x.x...::.x..xx.::.x..xx:x.:..:.:x::.:.:...x:.x......x.....:...... 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% -14190954 -80039448 +3332 chr4 + 190214555 18704646 18704645 18704808 163 TTTCTTTTCTT-----TTCTTTTCT---TTTCTTTCTTCT-TTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT-----TTCTCTTTCTTGCTTTCTTGCTTTTCTTCTTTTTCTTTCTTTTTTCAAT chr4 + 94230402 72471345 72471344 72471516 72471345 72471344 72471516 172 TTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCC---CTTGC--TCCCTCCCTTTCTGACTCCTTTGAAT ...:..:....-----..:.:....---......x:..x.-...:.:..........::...:.......xx:.x.x.::...:x.:x..x.x.x:...:x.x...x:..x.x.x...x.:x.-----.:.:..:....x.---.....--.:.:..::.....xx..::...x... 11M5I9M3I12M1I82M5I13M3D5M2D26M 107/158 67.7% 172/94230402 0.0% 19/158 12.0% -53766699 -40463703 +3516 chr4 + 190214555 18704646 18704645 18704827 182 TTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTGCTTTCTTGCTTTTCTTCTTTTTCTTTCTTTTTTCAATGATGTCTC-ACTCTGTCATC chr4 + 94230402 38131863 38131862 38132045 38131863 38131862 38132045 183 TTCCTTTTGAATTCTCTTGACTTTTTTCCCCCCTCTTGCTTTTCCTTTTTTTTCTTCCTGCTTTTTGACTCTCTATTCCTTCTGTTTGGATCCCAGCTCTTCCGACTTTTTCCCAGCTCTCAGAGCCTTTCTTCTTTGCCCACCTCACCTCTCTGTATGCAGTCACACATCTCCTTTGTTATC ..:.....xxx....:..xx:..:....::.::....x.....:....:.......:::x:.:...xx:...:.x..:...::x..:xxx::::xx:....:.xx::....:.:xx....:xxxxx.......x:..x:.:x.:.:x:..:...x.x.x..:.x.:::x..-x..:...:... 171M1I11M 102/182 56.0% 183/94230402 0.0% 1/182 0.5% -19427217 -74803185 +3332 chr4 + 190214555 18704660 18704659 18704741 82 TTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ............x:::..x..:.:...:.:.:..:xx:.x:.x.:.........:...::...x.....x..xx:.x..... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -38667368 -55563034 +3159 chr4 + 190214555 18704663 18704662 18704745 83 TCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:...::......x.::..x..:.::.::.:.:...xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -38667364 -55563038 +3121 chr4 + 190214555 18704669 18704668 18704764 96 CTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTC chr4 + 94230402 89201222 89201221 89201317 89201222 89201221 89201317 96 CTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTC ....:xx..x.:........:....:...:....xxx:.x.x::......x:.xx.:.:::.:.:..:...:....x.x.::.:::..:..x.... 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% -70496553 -23733849 +3614 chr4 + 190214555 18704674 18704673 18704784 111 TTCTTTCTTTCTTTTTC-----TTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTGCTTTCTTGCTTTT chr4 + 94230402 63697119 63697118 63697234 63697119 63697118 63697234 116 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ..x..:..:..:...:.-----.....:..:.....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.....:..:.:.::..x.......x..... 17M5I94M 72/111 64.9% 116/94230402 0.0% 5/111 4.5% -44992445 -49237957 +3496 chr4 + 190214555 18704678 18704677 18704797 120 TTCTTTCTTTTTCTTTCT--TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTGCTTTCTTGCTTTTCTTCTTTTTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x...:.:.:.....:--.x.:..:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:...:x.xx...:.:...:x.:.::..x....::.:......x... 18M2I102M 74/120 61.7% 122/94230402 0.0% 2/120 1.7% -44992440 -49237962 +3415 chr4 + 190214555 18704687 18704686 18704807 121 TTTCTTTCTTTTCTTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTGCTTTCTTGCTTTTCTTCTTTTTCTTTCTTTTTTCAA chr4 + 94230402 63697118 63697117 63697241 63697118 63697117 63697241 124 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAA ...x..:..:.:....:.x---..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:..x:xx.:x:.:...:x.:.:.:......:.:::.:...x..:.. 19M3I102M 74/121 61.2% 124/94230402 0.0% 3/121 2.5% -44992431 -49237971 +3571 chr4 + 190214555 18704688 18704687 18704803 116 TTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTG--CTTTCTTGCTTTTCTTCTTTTTCTTTCTTTTT chr4 + 94230402 63697118 63697117 63697235 63697118 63697117 63697235 118 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..:x...:.:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx:::..x..:....x::--......:x.:::....:.:......:...... 84M2I32M 72/116 62.1% 118/94230402 0.0% 2/116 1.7% -44992430 -49237972 +3105 chr4 + 190214555 18704695 18704694 18704793 99 TTTTCTTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTGCTTTCTTGCTTTTCTTCTTTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ......:..:...:::..x.....-.x....xx.....x.:.:xxx.:..:x:.:....x:xx.........::.:.x:......x...:::..:.x... 24M1I75M 64/99 64.6% 100/94230402 0.0% 1/99 1.0% -44992445 -49237957 +4193 chr4 + 190214555 18732092 18732091 18732200 109 ATACATATATATTTATGTGTATATATATAGATATGCACATACATGTGTATGTATATATAGATATATGCATACATACATATGTGTATATGCGTATATATATGCATACATA chr4 + 94230402 21109195 21109194 21109301 21109195 21109194 21109301 107 ATACATGTGTGTCTCTGTGGGCGTATTTA--TATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:.:.:.:.x....x:::...x..--....:..x:....:.::x:..:..:x..x.::....:.:x...:.x.x..........:....:x........:..:. 29M2D78M 72/107 67.3% 107/94230402 0.0% 2/107 1.9% -2377103 -91853299 +3002 chr4 + 190214555 18732129 18732128 18732167 39 CATACATGTGTATGTATATATAGATATATGCATACATAC chr4 + 94230402 28919109 28919108 28919147 28919109 28919108 28919147 39 CATATATATGTGTGTATATATAAATATATGCATACACAC ....:..:...:..........:.............:.. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -10186980 -84043422 +3158 chr4 + 190214555 18759143 18759142 18759215 73 TGTGCTTCATATATATATATATATATATATATATATATATATTATATATATATATATATATATATATATATAT chr4 + 94230402 15348787 15348786 15348859 15348787 15348786 15348859 73 TGTGTTCTATACATATATATATTTGTGTATGTATATATTAATTATCTACAAATATGTTTGTTTGAAAGCATAT ....:.::...:..........x.:.:...:.......xx.....x..:.x....:.x.:.x.:x.x::.... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 3410356 NA +3030 chr4 + 190214555 18785047 18785046 18785100 54 TTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGATGGAGTCTCACTCTG chr4 + 94230402 90152632 90152631 90152685 90152632 90152631 90152685 54 TTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ..:..:....::.:.....:.x..............x..x.:.:.:.....x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -71367585 -22862817 +3062 chr4 + 190214555 18792120 18792119 18792191 72 TTAAGATCAACATGTCTTGTTCCTTCAATCACAATTTCTGTCAGTTCAATTAAAAAAATTATCTAAGACCAC chr4 + 94230402 18149684 18149683 18149755 18149684 18149683 18149755 72 TTAAATTCAACGTTTTCTGTTTCTTCATTTGTGGTCTCGTTAAATACAAGAAAAAGAATTATCTAAAACCAC ....:x.....:.x.::....:.....x.:::::.:..xx.x.:.x...xx....:..........:..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 642436 NA +3448 chr4 + 190214555 18837063 18837062 18837202 140 CTGATTCCTTTTCTACCTCCTCCTCCTCCTGCTGCTGTTGTTGTTGTTCT---TCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT chr4 + 94230402 33237612 33237611 33237754 33237612 33237611 33237754 143 CTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCT ...x:..xx......x::.:x:...:::.xx..x::::....xx::.x..---.:....:...:x.....xx::.x.......x...:x.:.:....x::..:.:x:.:::....:::...:.x.....x....x...:x... 50M3I90M 82/140 58.6% 143/94230402 0.0% 3/140 2.1% -14400549 -79829853 +4654 chr4 + 190214555 18837081 18837080 18837331 251 CCTCCTCCTCCTGCTGCTGTTGTTGTTGTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT------TCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTC------------------TTCTTCTTCTTCT----TCTTCTTCTTCTTC------TTCTTCTTTTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTTTCTCCTGATCATTCT chr4 + 94230402 66682225 66682224 66682509 66682225 66682224 66682509 285 CCTCTTTCTCTTGCTTCAGTTTTATTTCAGCTTCTGGAAGCTCTTCCTCTTCTAGCTCTTGTCTCTGTTTTTCTTCCTTATTTTGTTCCACTAGTTCTTTTTGTTCCTCCAGCTGATTTCTTTCCTCTTCCTCCTGACACCATTTCTCAGTCTCGTGTTGCCTCAGTTCTTCCAGCTCTAGCCTctcctgctcctccagcacatttctctgttcctcctccagctccttgtgcttctgctcttcccattcctggtgtttttgctcctctagctcttgcctcttct ....:.:...:....x.x...x.xx..xxx.....xxxxx:.....:.:....xx:....x.::..x..:......:.:x.:..x...:x..xx.....:..x...:..:------.:.::...:.....:....xx:x.:x..:...------------------......:xx:...----...:..x..:..:.------..::...x...:::...::x...::.x.x::....::::..:.x:.:::xx.x.:...x:::....xx...:..x::x.... 110M6I32M18I13M4I14M6I82M 151/251 60.2% 285/94230402 0.0% 34/251 13.5% -47845144 -46385258 +3022 chr4 + 190214555 18837184 18837183 18837288 105 TTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTCTCTCTGTCTCTCTCTCTCTCTGTCTC chr4 + 94230402 79672605 79672604 79672709 79672605 79672604 79672709 105 TTCATCCTCCTCTTGTTCTTCCTCATGGGTTTCTACGTATTCTTCTGCCTCTTCTTCATTTAATTCACTCCTTTTCCGTGCTCCAGCCTTTATACTCTCTGGTTC ...x..:..:....x......:..x.xxx::...x.x.x.......x.:........x.:.xx...x:::::...:.x:x...::x.::.:x:x.......x:.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% -60835421 -33394981 +3148 chr4 + 190214555 18837227 18837226 18837290 64 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTC chr4 + 94230402 84992643 84992642 84992706 84992643 84992642 84992706 64 TCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCC ...:.:.:..:..:...:.:..:...:.::..:...:.x...:..:......:.x..:.x..:. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -66155416 -28074986 +3147 chr4 + 190214555 18837234 18837233 18837305 72 CTTCTTCTTCTTCTTCTTCTTCTTTTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTCTCTCT chr4 + 94230402 28615945 28615944 28616016 28615945 28615944 28616016 72 CTTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT ......::.......:....:....x..::x::....x:...x.x.:.::xx.......:....:..::.:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -9778711 -84451691 +3045 chr4 + 190214555 18845772 18845771 18845818 47 GTGTGTGTGTGTTTGTGTATGTGTGTGCATGTGTATGCAAGTGTGTA chr4 + 94230402 320579 320578 320625 320579 320578 320625 47 GTGTGTCTGTGTATGTATACGTGTGTTCATATGTGTACAAGTGTGCA ......x.....x...:..:......x...:...:.:........:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 18525193 NA +3101 chr4 + 190214555 18848336 18848335 18848376 41 ATCTTTAAAAAAAAAAGATAGAGAAAAAGAAAAAAACCATC chr4 + 94230402 59304492 59304491 59304532 59304492 59304491 59304532 41 ATCTTCAAAAAAAAAAAAGAGAGAAAAAGAAGAAAACCACC .....:..........:.x............:.......:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -40456156 -53774246 +3127 chr4 + 190214555 18851691 18851690 18851759 69 TACCATTAGGTATAAACGCGGACCAGCTAATTACTCTGGTTTTTGTTTGTTTGTTTTGTTTTGTTTGTT chr4 + 94230402 86593693 86593692 86593761 86593693 86593692 86593761 69 TACCCTCAGCACTAAATGTGGATTAGTAGTTTTCAAGGGTTTTTGTTTGTTTGTTTTGCTTTGTTTTTT ....x.:..xxx....:.:...::..:x:x..x.xxx.....................:.......x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -67742002 -26488400 +3065 chr4 + 190214555 18883079 18883078 18883138 60 TGTGTGTGTATATATATATATATATATATATATATATATATGATACTTGTTAAATTATCC chr4 + 94230402 48958675 48958674 48958734 48958675 48958674 48958734 60 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGATTTTTCC .......x.:....:........:.:.:........x.....:x.x..:x.:.x..x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -30075596 -64154806 +3003 chr4 + 190214555 18884230 18884229 18884278 49 GTGTACATATATTGGTACACACACACACACACACACATACACACACACC chr4 + 94230402 10619992 10619991 10620040 10619992 10619991 10620040 49 GTGTACATTTACTTTTGCGCGCACACACACACACACATACATGCATATC ........x..:.xx.:.:.:....................::..:.:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 8264238 NA +3065 chr4 + 190214555 18973661 18973660 18973735 75 AAATCCC-CCTGGG-----TATTTGTTTTTGTTTTTGTTTTTCGTTTGTTTGTTTTGTTTTGTTTTCCTGTTTCAGAGGGA chr4 + 94230402 25575987 25575986 25576067 25575987 25575986 25576067 81 AAATCCTTCCTGGGCCACTTTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAAACAGA ......:-......-----.x:.x.......x...xx..x..:...x...x...............:..x...:.:.x:.. 7M1I6M5I62M 58/75 77.3% 81/94230402 0.0% 6/75 8.0% -6602326 -87628076 +3192 chr4 + 190214555 18973673 18973672 18973770 98 GTATTTGTTTTTGTTTTTGTTTTTCGTTTGTTTGTTTTGTTTTGTTTTCCTGTTTCAGAGGGATCAGCTACATTTACAATCTCAATATGTTTTGTCAG chr4 + 94230402 14359018 14359017 14359115 14359018 14359017 14359115 98 GTAAATGCTGTTATATATGTTTTTTGTTTGTTTGTTTGTTTTTTACATCATGTTCCAGTTTGGTCAGTTACATTATGAGTTTAATAATGGCTCATCAG ...xx..:.x..:.x.x.......:............xx....xx:x..x....:...xxx.:....:......xxx.:.:.x.xx...x:.::.... 98M 65/98 66.3% 98/94230402 0.0% 0/98 0.0% 4614655 NA +3615 chr4 + 190214555 18978938 18978937 18979065 128 TCTAATTTTAATGGTTCATCTTTTCTTTGTGTGTGTGTGTTTTTCTGTATGTATTG--TTTTGTTTTAGTCAAATTATTTTGATGATTCTAGTTATAAAAATATATCATCTGTTAAGAGAAAAATTTCTT chr4 + 94230402 84043409 84043408 84043522 84043409 84043408 84043522 114 TTTCATTTCATTAATTTATTTTTTCTTTGTGTGTGTGTGCTTTGATATATTTATTAATTTTGACTGTTGT-------TTTTGAGCATTGTAGTTAGGAAAA---------TGCTAGGAACAACATTTATT .:.x....:.x.::..:..:...................:...xx.:...x....:--...x::.x.x..-------......xx...x......x:....---------..:..:..:x..x....x.. 56M2I12M7D24M9D20M 82/112 73.2% 114/94230402 0.0% 18/112 16.1% -65064471 -29165931 +3014 chr4 + 190214555 19005702 19005701 19005758 57 CAGAGTCCTAGTTTTGTAAAGAGTTTCTTTCTTTCTTTTTTTTTTTTTTGAGACGGA chr4 + 94230402 48272235 48272234 48272291 48272235 48272234 48272291 57 CAGAGTTTTTGTTCTGCAAGTATTTTCTTTTTTTATTCTTTTTTTTTCTGTGGCAGA ......::.x...:..:..:x.x.......:...x..:.........:..x.:.:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -29266533 -64963869 +3177 chr4 + 190214555 19014234 19014233 19014289 56 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCACATGTGTG chr4 + 94230402 5214261 5214260 5214316 5214261 5214260 5214316 56 TACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .::....:..::.x..::........:.::x::...............x....... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 13799973 NA +3549 chr4 + 190214555 19015842 19015841 19015913 72 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCGCTGGAACCGAGGAGTTAGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.xx.x...x.:..x.....x..:..:.xx:.....:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -57017364 -37213038 +3011 chr4 + 190214555 19076233 19076232 19076284 52 CAAAATGGAAAATAGAAACAAACAACAACAACAACAAAACAACAACAAAAAA chr4 + 94230402 33844414 33844413 33844465 33844414 33844413 33844465 52 CAAAGTAAAAAAAAAAAGCAAAAAACAACAACAAAAAAACAACAATATATAA ....:.::....x.:..:....x...........x..........:.x.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -14768181 -79462221 +3312 chr4 + 190214555 19076234 19076233 19076300 67 AAAATGGAAAATAGAAACAAACAACAACAACAACAAAACAACAACAA--AAAATGCTTTCTAGAAAAAG chr4 + 94230402 26428834 26428833 26428902 26428834 26428833 26428902 69 AAAAAAAAAAAAAAAAACCAGCAGCAACAACAACAAAACAACAGCAAATAAAATACTCCTGAAGAGAAG ....x::....x.:....x.:..:...................:...--.....:..:::x.::.:... 47M2I20M 50/67 74.6% 69/94230402 0.0% 2/67 3.0% -7352600 -86877802 +3137 chr4 + 190214555 19077831 19077830 19077889 59 CTGATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTT chr4 + 94230402 72881890 72881889 72881948 72881890 72881889 72881948 59 CTGAGCAGCTTGTTTTTTTTTTTTTGTGCTTTTTTTTTTCTTAAGCCTATTTTTTTTCT ....x:x....x.............x.x:.............xxx::..........:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -53804059 -40426343 +3011 chr4 + 190214555 19077833 19077832 19077887 55 GATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTT chr4 + 94230402 73036143 73036142 73036197 73036143 73036142 73036197 55 GATTTGATTTTTGTTTCTCTTTTTTTTTTTTTCTTCTGGCTTTTCCACTTTTGTT ......x.....x...:.:.............:..:.xx:....::.:....x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -53958310 -40272092 +3151 chr4 + 190214555 19077834 19077833 19077906 73 ATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTT chr4 + 94230402 2740432 2740431 2740504 2740432 2740431 2740504 73 ATTCTCTCATTCTGTTTTTGGGTTTTTTTTTTTTTTGCTCTATTTATTTTTTTCTATTTCTATGATTTTATTT ...:x..:x..:.x.....xxx..............x:.:.x...........:.x...:.x.:x....x... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 16337402 NA +3246 chr4 + 190214555 19077841 19077840 19077912 72 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTA chr4 + 94230402 64908804 64908803 64908875 64908804 64908803 64908875 72 TTTTTTGTTTTTTTTTTTTGTTTGTTTTGTTTTAAATTATTTGCTCTTTCTCCTTAATTCCCTTCTGTTTTA ......x............x...x....x:...xxx......x:.:...:.::..x...:::..:.x..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -45830963 -48399439 +3008 chr4 + 190214555 19077846 19077845 19077914 69 TTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATT chr4 + 94230402 45354070 45354069 45354138 45354070 45354069 45354138 69 TTCTGTTTCTTTCCTTTTTCTTTCTTTTTTTTTAACCCATTCTCTTTCTATAATTTTTATTGTGTTATT ..:.x...:...::.....:...::.........x:::x..:.:...:.x..x.....x..x.x..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -26276224 -67954178 +3076 chr4 + 190214555 19089138 19089137 19089233 96 AAGAAAATATCTTCATTTTATTTCTTTTCTTTTTTCTTTATGATGAGATATAAGATTTATTGACTTCATATCAGCATTTAAGTCTTGTTAACTTTA chr4 + 94230402 12203454 12203453 12203540 12203454 12203453 12203540 87 AAGAAAAAATACTCAGTTTATTTCTGTCCTTTTTTCCTTCTGCTAAGATGAAAGA-------GCCTGACATTTG--TTTAGGGCTTGTAAATTCCA .......x..x:...x.........x.:........:..x..x.:....:x....-------:.:.x.:..:x.--....:.x.....x..:.::. 55M7D12M2D20M 63/87 72.4% 87/94230402 0.0% 9/87 10.3% 6885684 NA +3172 chr4 + 190214555 19093402 19093401 19093474 73 GAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTACCTATCATGTTTCTGCCTGTGAAATACTTATTCTTGCCTTA chr4 + 94230402 28648426 28648425 28648498 28648426 28648425 28648498 73 GAGTCTTTGTCTTTTTTTTTTTTTCTTCTTCTTATGTCATGTACTACAATATGAAATATTCAGTTGTGCCTTA ........x.:.............:..:..:x:x.:......x::xxxx.:.......:.:.x.:x....... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -9555024 -84675378 +3126 chr4 + 190214555 19095802 19095801 19095860 59 AAAGAAAGAAAACAAAGGAAGAGAAAGAAGAAAGGAAGGGAGGGAAGGAGGGAGGAGGA chr4 + 94230402 66803529 66803528 66803587 66803529 66803528 66803587 59 AGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGA .:..........x...:.....::..:...:.:..:x:.x...x......:..:x.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -47707727 -46522675 +3069 chr4 + 190214555 19104657 19104656 19104706 50 AACAAAAATTAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGA chr4 + 94230402 78266973 78266972 78267022 78266973 78266972 78267022 50 AACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAA ......:..............xx....::::.....:.......:.:.:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -59162316 -35068086 +3021 chr4 + 190214555 19104660 19104659 19104725 66 AAAAATTAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAGAATTCCCTGTCTAC chr4 + 94230402 30583657 30583656 30583722 30583657 30583656 30583722 66 AAAATTTAAAAGGAAAAAAATAAAAAAGAAGAAGAAAAAGGCACAGAGACTAAATCCTCTTCCTGC ....x......::.......x.........::.:.:....:x.x...:.xx:...:.:..x:..:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -11478997 -82751405 +3078 chr4 + 190214555 19119032 19119031 19119089 58 TCTACTCTTATTATATATATATGTATATATGTGCATATATGTATATGTATATATATGT chr4 + 94230402 65759979 65759978 65760036 65759979 65759978 65760036 58 TCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ......:.x:x.x.:.:x:.......:.:........:....x.:......:...... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -46640947 -47589455 +3807 chr4 + 190214555 19119774 19119773 19119864 91 TCTCTCTCTCTCCATCTTTCTCTGTGTGTATGTGTATATACACATGAATAGACGGATACACACATGCATATG---CGTGTGTATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x..:x...:.........:...:...:........::x::.x..xxx..x.:....x:.....---:...:.:..:.:.:..... 72M3I19M 64/91 70.3% 94/94230402 0.0% 3/91 3.3% -41711756 -52518646 +3044 chr4 + 190214555 19119832 19119831 19119875 44 CACACATGCATATGCGTGTGTATATATATATATACACACACACA chr4 + 94230402 29797140 29797139 29797183 29797140 29797139 29797183 44 CATACATACGTATGCGTGTGTATGTGTAGATATATATACACACA ..:....:.:.............:.:..x.....:.:....... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% -10677308 -83553094 +3214 chr4 + 190214555 19119850 19119849 19119941 92 TGTATATATATATATACACACACACACACATACAGATAGATAGATACTGGCTCTGATTAATATAAAGGTAAAATTG----AGAAAAAACAAGGTAA chr4 + 94230402 74671076 74671075 74671157 74671076 74671075 74671157 82 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAA--------------AAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAA ................:.............:.x.:.x.:....x..x--------------.x...:x.....x..----....::..:...x... 47M14D15M4I16M 62/78 79.5% 82/94230402 0.0% 18/78 23.1% -55551226 -38679176 +3378 chr4 + 190214555 19124728 19124727 19124849 122 AAAAAGAAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAAGA-----AAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGAGAGAAA chr4 + 94230402 54011596 54011595 54011722 54011596 54011595 54011722 127 AAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .....:..x........x......:......::x.xxxx.:..x:x.:x..:.....:x.:..:x:xx:...xxx:....:.-----.:x.x::...:....x....:.x...:.....:.:.:... 82M5I40M 77/122 63.1% 127/94230402 0.0% 5/122 4.1% -34886868 -59343534 +3735 chr4 + 190214555 19124729 19124728 19124858 130 AAAAGAAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGAGAGAAAGAAAATAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .:..:......x........x.....::......::x.xxxx.:..x:x.:x..:.....:x.:..:x:xx....xxx.:...:.xxx.x..x.x.:.::.....x....:.x..::....:....x... 130M 81/130 62.3% 130/94230402 0.0% 0/130 0.0% -34886864 -59343538 +3457 chr4 + 190214555 19124766 19124765 19124872 107 AGGAAGGAAGGAAGGAAGGAAG-GAAGGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGAGAGAAAGAAAATAAAGGAAAGAAAGAAAG chr4 + 94230402 24042747 24042746 24042854 24042747 24042746 24042854 108 AGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAAGCAG ....:x...:..:x:..:.x..-:..:...::...:x......x..:..........x.:.x.....xx.x.x...x:x:x::..:x...:.........x..::x.. 22M1I85M 70/107 65.4% 108/94230402 0.0% 1/107 0.9% -4917981 -89312421 +3078 chr4 + 190214555 19124807 19124806 19124877 71 AGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGAGAGAAAGAAA-----ATAAAGGAAAGAAAGAAAGAAAAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x.........:.............::::....::.x:x..:.:..-----.:.:..:...x::.:...:..... 47M5I24M 50/71 70.4% 76/94230402 0.0% 5/71 7.0% -18953971 -75276431 +3396 chr4 + 190214555 19124821 19124820 19124928 108 AAAGAAAGAAAAGAAAGAAAAGAGAGAAAGAAAATAAAGGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAAGTGGGAGAGAGGAAAGTGGGAAAAAAAGAAGGAAGGA chr4 + 94230402 25190329 25190328 25190436 25190329 25190328 25190436 108 AAGCAAAGATGAGAGAGAAAAGAAAAAAATCAAATGTGGTAGAGAAGAAATGTAAGAGAGAATAGACAGAGATGAGAGGTATAAAACAGTAGAAAAAGGAGAGAAGAA ..:x.....x:...:........:.:...xx....:x:.x.:....::..x.x..:...:.:x.::x::.::..:...:x.x:...xx.x::.....:..::....:. 108M 65/108 60.2% 108/94230402 0.0% 0/108 0.0% -6065508 -88164894 +3057 chr4 + 190214555 19124894 19124893 19124945 52 GGGAGAGAGGAAAGTGGGAAAAAAAGAAGGAAGGAAGGCAGGAAGGAAAGCC chr4 + 94230402 82897928 82897927 82897979 82897928 82897927 82897979 52 GGGAGAGAGGGGAGGGGAAAAAAAAAAGGGAAGGAAACTGGGAGGTAAAACC ..........::..x..:.......:.:........:x::...:.x...:.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -63773034 -30457368 +3029 chr4 + 190214555 19143017 19143016 19143068 52 CTTTCATATATATATATATATATATATATACACACACACACACACACACACA chr4 + 94230402 50629528 50629527 50629579 50629528 50629527 50629579 52 CTTTAATATATACCTATATAAATATGTATACACACATGTAAATACACAAACA ....x.......:x......x....:..........:::.x.:.....x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -31486511 -62743891 +3036 chr4 + 190214555 19143027 19143026 19143066 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 14733945 NA +3899 chr4 + 190214555 19143285 19143284 19143427 143 AGCTCCAGTGTGTATACATATATACACACATATATATGTGTGTGTGTGTATTATAT-----------ATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAAATTAGTTCCATCCCTCT chr4 + 94230402 68837022 68837021 68837172 68837022 68837021 68837172 151 AGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT---CAGAACTTAATTTCCTGCCCTT ..:..xx....:........:.....:..x..:.:.:::::.::x.xx:.xx.x..-----------.x:x.:.....:.............:.:.:.x...:...:...:.:..::.:.:..x.x...---:.x..x...:..:.x.x..::. 56M11I62M3D22M 89/140 63.6% 151/94230402 0.0% 14/140 10.0% -49693737 -44536665 +3683 chr4 + 190214555 19143324 19143323 19143409 86 GTGTGTGTGTATTATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834521 85834520 85834606 85834521 85834520 85834606 86 GTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA ..x..x..x.x....x:..x.:...x...............:...xx..:..x::...:....:..x...:..:.x...::.:.:. 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% -66691197 -27539205 +3682 chr4 + 190214555 19143326 19143325 19143412 87 GTGTGTGTATTATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAAAT chr4 + 94230402 85834521 85834520 85834607 85834521 85834520 85834607 87 GTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ..x..x..x..x...x:..x.....x.............:.:...xx..:..x::...:....:..x...:..:.x...::.:.x.. 87M 61/87 70.1% 87/94230402 0.0% 0/87 0.0% -66691195 -27539207 +3106 chr4 + 190214555 19143333 19143332 19143409 77 TATTATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 39937172 39937171 39937248 39937172 39937171 39937248 77 TGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA .::.........:.....::...x......::xxx.x..:...:xxx:...:.:...:.......:...x..:.::. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -20793839 -73436563 +3429 chr4 + 190214555 19143338 19143337 19143413 76 TATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAAATT chr4 + 94230402 39937175 39937174 39937250 39937175 39937174 39937250 76 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCATT ...............::...x.......:xxx.x..:...:xxx:...:.:...:.......:...x..:.:x... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -20793837 -73436565 +3476 chr4 + 190214555 19143338 19143337 19143406 69 TATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:..x..........x...x...x.....:.....:......x.:.xx.x:...x........::.:.. 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% -50950804 -43279598 +3456 chr4 + 190214555 19143339 19143338 19143409 71 ATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834538 85834537 85834608 85834538 85834537 85834608 71 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..x.:.:.x...................xx..:..x::...:....:..x...:..:.x...::.:.:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -66691199 -27539203 +3059 chr4 + 190214555 19143340 19143339 19143407 68 TATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 21109194 21109193 21109261 21109194 21109193 21109261 68 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTA ....:........x.x....x.:....x.....:..:x:.:.....:x::.:..:x....::...:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -1965854 -92264548 +3248 chr4 + 190214555 19143341 19143340 19143434 94 ATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAAATTAGTTCCATCC--CTCTAAAGAAC chr4 + 94230402 46063299 46063298 46063394 46063299 46063298 46063394 96 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCTCAACAGAAC ...:......:::.....:..x.:.:..:.x:..:...:.x......:......:xxx.......:.x::xx:.:.x.:...:--...x.x..... 83M2I11M 62/94 66.0% 96/94230402 0.0% 2/94 2.1% -26919958 -67310444 +3033 chr4 + 190214555 19143343 19143342 19143410 68 ATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAA chr4 + 94230402 46063299 46063298 46063366 46063299 46063298 46063366 68 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAA ...::.....:::.....:..x::.:..:.x:..:...:.x......:......:xxx.......:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -26919956 -67310446 +3062 chr4 + 190214555 19154772 19154771 19154848 77 AAAAACTTAGTCTTAAAAAAAAAAAAAAAAAAAAAAGGTAAAAACCTCAATTGCTTTTGCACCAAGTATGTTTTTTA chr4 + 94230402 77717748 77717747 77717824 77717748 77717747 77717824 77 AATAACTTTGTCAAAAAAAGAAAAAGAAAAAAGAGAGGTAAAACCCTAAAAGGGCTTGCTGTCAAGTCTGGATTTCA ..x.....x...xx.....:.....:......:.:........x...x..xx.x:..xx:::.....x..xx...:. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -58562976 -35667426 +3773 chr4 + 190214555 19166968 19166967 19167050 83 AGTGGTATTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTAAGGCTGGAGAATCGCTTGAACCCAGAAGGCGCAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGT-----GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----..:.x....:.:...........::.....:..x.:x.x...x.:..............x:x::..:..:.. 6M5D72M 58/78 74.4% 78/94230402 0.0% 5/78 6.4% -56866232 -37364170 +3372 chr4 + 190214555 19222012 19222011 19222073 62 CATCTCAAAAAAAACCCAAAAAAACAAACACACACACACACACACAC--------AAACCTACAACAGGC chr4 + 94230402 26446824 26446823 26446893 26446824 26446823 26446893 70 CACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACACCCCCCAAAACCCTCCACAGAC ..:.x.........x........x.x....x................--------.....:x.x....:. 47M8I15M 52/62 83.9% 70/94230402 0.0% 8/62 12.9% -7224812 -87005590 +3487 chr4 + 190214555 19226196 19226195 19226273 78 ATGTATATAGTATGTATTATATATAATGTATATAGTATG--TATTATAT-----ATAGTATATATTATATATAATGTATATAATA chr4 + 94230402 26320260 26320259 26320344 26320260 26320259 26320344 85 ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .........x..::...........x.:....:.:...:--......:.-----.........x..xx:...x:.:...:..... 39M2I8M5I31M 61/78 78.2% 85/94230402 0.0% 7/78 9.0% -7094064 -87136338 +3688 chr4 + 190214555 19226238 19226237 19226396 159 TATATATAGTATATATTATATATAATGTATATAATATATTATATATAATGTAT---ATAATATATTATATATAATGTATATAATATATTATATATAACGTATATTATATATTATATATAATGTATATTATATATAAAATATTATATTTATATATAATATATA chr4 + 94230402 26320261 26320260 26320414 26320261 26320260 26320414 154 TGTATATACTACATATTATATATACTATATACAATATATT---TATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTA----GTATGAAAAATTAAGTGTGAT-TTTATTCCTAAAATGTA .:......x..:............x.:....:........---...x......---...:......x.xx:..x.......:xx...xx:.:x::.:.xxx:....:.x..:x.x.x..----:...x.x.x..x..:.:.x..-.....x:x...x..:.. 40M3D10M3I63M4D21M1D17M 104/151 68.9% 154/94230402 0.0% 11/151 7.3% -7094023 -87136379 +3886 chr4 + 190214555 19226468 19226467 19226624 157 ATATAATGTATAATGTATACATTATAT-ATTATATATA-----ATGT--ATATTGTAT-ACATTACATATATGTAATAT--ATATAATATATATTATATATAATATATATTACATATATGTAATATATATAATATATTATATATATTATATATATTATATATATATTA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA------GTATATTTTTAGTATTGTATATGTAATA ..:..:...:.x..xx...x.x...x.-x......:..-----....--.....xx..-.xx...x..x...x.x.:..--.....x..:............x......:x.:....x.:.x..:...x.....------:......x.xx:....:.....:..x.. 27M1I10M5I4M2I9M1I20M2I53M6D28M 112/151 74.2% 162/94230402 0.0% 17/151 11.3% -7093715 -87136687 +3968 chr4 + 190214555 19226517 19226516 19226615 99 TACATTACATATATGTAATATATATAATATATATTATATATAATATATATTACATATATGTAATATATATAATATATTATATATATTATATATATTATA chr4 + 94230402 26320252 26320251 26320344 26320252 26320251 26320344 93 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTA------ATAGTATATTTTTAGTATTGTATATGTAATA ..:x.:....:...:..x..:....x.......:......:.......x.xx:..:...x..------...:......x.xx:....:.....:.x... 62M6D31M 69/93 74.2% 93/94230402 0.0% 6/93 6.5% -7093735 -87136667 +3694 chr4 + 190214555 19226518 19226517 19226624 107 ACATTACATATATGTAATATATATAATATATATTATATATAATATATATTACATATATGTAATATATATAATATATTATATATATTATATATATTATATATATATTA chr4 + 94230402 36606074 36606073 36606170 36606074 36606073 36606170 97 ACATCACATTTGC-----ATGTCTAATGTATATTTTATATCAAATAATTTACATGTATATAATATATAGAGTGTAT----TATATTAAAAATGTGA-ACATATATTA ....:....x.::-----..:.x....:......x.....x.x...xx......:...:.........x.:.:...----.......x.x..:.x.-.:........ 13M5D58M4D16M1D10M 75/97 77.3% 97/94230402 0.0% 10/97 10.3% -17379556 -76850846 +3781 chr4 + 190214555 19226558 19226557 19226662 105 AATATATATTACATATATGTAATATATATAATATATTATATATATTATATATATTATATATATATTATATATTATATA-TATATTATATATATTATATATATATTA chr4 + 94230402 26320248 26320247 26320344 26320248 26320247 26320344 97 AATTTATCTCACATGTATATACT-------ACATATTATATATACTATATACA--ATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ...x...x.:....:...:..x.-------.:............:......:.--......x......:...:xx...-......x.xx:....:.....:..x.. 23M7D23M2D23M1I27M 75/96 78.1% 97/94230402 0.0% 10/96 10.4% -7093690 -87136712 +3018 chr4 + 190214555 19247996 19247995 19248058 63 TCTTTGCTTTTTTTTTTTTTTTTTTTTTTTGTCAGGAAAGGCCTTTATTTCTCCTTTATTTCC chr4 + 94230402 12051796 12051795 12051858 12051796 12051795 12051858 63 TTTTTGGTTTTTTTTCTGTTTTTTTTTTTGGTGAAAAATGGCCTATTTCTCATTTTTGTTCCC .:....x........:.x...........x..x.::..x.....x.x.:..x::...:..:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 7196200 NA +3089 chr4 + 190214555 19267458 19267457 19267511 54 CATTCAGTCCTGTTTTTCTTTCTGCTATTAGACTGTTTTTTTTTTTTTTGCTAT chr4 + 94230402 44106341 44106340 44106394 44106341 44106340 44106394 54 CATGCAGTCCTGTTTTTGTTTCTGCTATGTGTGTGTGTTTTTTTTTTTTAATGT ...x.............x..........xx.xx...x............:x.:. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -24838883 -69391519 +3004 chr4 + 190214555 19273932 19273931 19273966 35 TAGGGTTTTTTTGTTTTGTTTTGTTTTTTACTATT chr4 + 94230402 29764371 29764370 29764405 29764371 29764370 29764405 35 TGGGGTTTTTTTGTTTTGTTTTGTTTTTTACTGTT .:..............................:.. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -10490439 -83739963 +3382 chr4 + 190214555 19277195 19277194 19277290 96 CACTCCAGCCTGGGTGA-CAGAGCGATTCTCAAAGAAAGAAAAAAAAGAAAAGAGAAAAAAGAAAAAAAAGAATAAGCAGTTCAAATATTTTTAATT chr4 + 94230402 59199834 59199833 59199930 59199834 59199833 59199930 97 CATTACAGGTTGTATAATCAAAACAATGCATAAAGAGATACAAAAAAGAAAAGAGAAAAAAAAAGTGGAAAAAAAGCCAGCCCAATAATTCTGAACT ..:.x...x:..x:.:.-..:.:.:..x.x:.....:.x.x....................:..:x::..:..x.:x...::...xx...:.x..:. 17M1I79M 64/96 66.7% 97/94230402 0.0% 1/96 1.0% -39922639 -54307763 +3145 chr4 + 190214555 19288727 19288726 19288803 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x....:..xx.x.:.x...........:.x:x.::...x:.....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -21823451 -72406951 +3153 chr4 + 190214555 19294077 19294076 19294128 52 ACAGAGTCTCATCTGTTGCCCAGGCTGGAGTGCAGTAGCACAATCTCAGCTC chr4 + 94230402 16725709 16725708 16725760 16725709 16725708 16725760 52 ACTGAGTCTCATCTGCTGTCCAGGCTGGGGTTCAGAAGCACAGTTTTCCCTC ..x............:..:.........:..x...x......:.:.:xx... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 2568368 NA +3096 chr4 + 190214555 19298400 19298399 19298469 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -56734797 -37495605 +3041 chr4 + 190214555 19328430 19328429 19328486 57 TATAGATGTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTTTTGC chr4 + 94230402 43396604 43396603 43396660 43396604 43396603 43396660 57 TGCAGGTCTCTTTTGATTTTTTTTTTTTTTTTTAAGCTACAGTTTTGATGCTTTTGC .::..:.x......xx.................:..x.:x.......x.x:...... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -24068174 -70162228 +3525 chr4 + 190214555 19333249 19333248 19333307 59 TCTCAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548415 85548414 85548473 85548415 85548414 85548473 59 TCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...:x.............:.:x.....:...:.:.:.::...:..........x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -66215166 -28015236 +3223 chr4 + 190214555 19333252 19333251 19333304 53 CAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:....x..........:.:..:...:.....x....::. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 17838249 NA +3305 chr4 + 190214555 19333256 19333255 19333309 54 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -66215164 -28015238 +3222 chr4 + 190214555 19333258 19333257 19333311 54 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............x.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -66215162 -28015240 +3008 chr4 + 190214555 19333260 19333259 19333313 54 AAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...........x.x.xx.....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -66215160 -28015242 +3016 chr4 + 190214555 19333262 19333261 19333324 63 AAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATGACAAGG chr4 + 94230402 85548420 85548419 85548482 85548420 85548419 85548482 63 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGG .........x.x.x.xx.....:...:.:.:.::...:..........x.....xx....x.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -66215158 -28015244 +3357 chr4 + 190214555 19373065 19373064 19373156 92 AACTCCCCTTCTCCCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 39131724 39131723 39131815 39131724 39131723 39131815 92 AAATCCCATCAACCCATTCAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATA ..x....x.:xx.....x::x.:..x...::.::x......x...x.x.......:x.....:..:.:.x..x..::..x...x:....... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% -19758659 -74471743 +3221 chr4 + 190214555 19373069 19373068 19373150 82 CCCCTTCTCCCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATA chr4 + 94230402 39131736 39131735 39131817 39131736 39131735 39131817 82 CCCATTCAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ...x...xxx.:.x...::.::x......x...x.x.......:x.....::.....x..x..::..x...x:.......:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -19758667 -74471735 +3689 chr4 + 190214555 19373079 19373078 19373162 84 CATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCTCCT chr4 + 94230402 85834537 85834536 85834620 85834537 85834536 85834620 84 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCT ...x.....x.................:.xx:...:x.::.:::.:....x...:..:.x...::.:.:...:.:.:..xx... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -66461458 -27768944 +3225 chr4 + 190214555 19373081 19373080 19373155 75 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:...x.................:.xx:...:x.::.:::.:...:x...:..:.x...::.:.:...:.:.:.. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -66461460 -27768942 +3187 chr4 + 190214555 19373084 19373083 19373167 84 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCTCCTATTAT chr4 + 94230402 39131745 39131744 39131828 39131745 39131744 39131828 84 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTAT .:..x...::.::x......x...x.x.......:x.....::.:.:.x..x..::..x...x:.......:.x.x.::.:... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -19758661 -74471741 +3351 chr4 + 190214555 19373091 19373090 19373157 67 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x.................:.xx:...:x.::..:....:..x...:..:.x...::.:.:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -66461450 -27768952 +3322 chr4 + 190214555 19373093 19373092 19373156 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834604 85834541 85834540 85834604 64 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA .....x.................:.xx:...:x.:...:....:..x...:..:.x...::.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -66461448 -27768954 +3053 chr4 + 190214555 19373094 19373093 19373161 68 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCTCC chr4 + 94230402 79265519 79265518 79265586 79265519 79265518 79265586 68 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCC .............::........xx...:.:.::...:.::.:.::.:.:::.x.:....x.:.x... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -59892425 -34337977 +3131 chr4 + 190214555 19373095 19373094 19373156 62 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834602 85834541 85834540 85834602 62 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .....x.................:.xx:...:x::...:....:..x...:..:.x...::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -66461446 -27768956 +3093 chr4 + 190214555 19373099 19373098 19373157 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....x.................:.xx:.:..x::...:....:..x...:..:.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -66461442 -27768960 +3124 chr4 + 190214555 19373100 19373099 19373175 76 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCTCCTATTATTTCTGTCC chr4 + 94230402 79265519 79265518 79265586 79265519 79265518 79265586 68 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACA--------TATTTGTGTCC .............::........xx........:...:.::.:.::.:.:::.x.:.--------.....x..... 57M8D11M 50/68 73.5% 68/94230402 0.0% 8/68 11.8% -59892419 -34337983 +3065 chr4 + 190214555 19373101 19373100 19373155 55 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834595 85834541 85834540 85834595 55 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .....x.................:.xx..:..x::...:....:..x...:..:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -66461440 -27768962 +3116 chr4 + 190214555 19373103 19373102 19373159 57 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCT chr4 + 94230402 85834541 85834540 85834597 85834541 85834540 85834597 57 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT .....x.................:.xx..:..x::...:....:..x...:..:.:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -66461438 -27768964 +3302 chr4 + 190214555 19373120 19373119 19373174 55 GTGTGTGTATATATATATATATATATATATATATATATCTCCTATTATTTCTGTC chr4 + 94230402 9891167 9891166 9891221 9891167 9891166 9891221 55 GTGTGTGTTTATATATCTATATACCTATATATGTATATCCATGATCATTTCTATC ........x.......x......:x.......:......:x:x..:......:.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 9481953 NA +3082 chr4 + 190214555 19388553 19388552 19388618 66 AAAAAAAAAAAAAAAAAAAAGGGAAAAACAGGAATCTTCAAGCTTAAGAATTCAATCAGTGAAATA chr4 + 94230402 64564386 64564385 64564446 64564386 64564385 64564446 61 AAAAAAAAAAAAAAAAAAGAGGGAAAAAATGCAACATATAAGCTCAAAACTTC-----GTAAAATA ..................:.........xx.x..:x.x:.....:..:.x...-----..:..... 53M5D8M 49/61 80.3% 61/94230402 0.0% 5/61 8.2% -45175833 -49054569 +3096 chr4 + 190214555 19388553 19388552 19388623 71 AAAAAAAAAAAAAAAAAAAAGGGAAAAACAGGAATCTTCAAGCTTAAGAATTCAATCAGTGAAATATAAAT chr4 + 94230402 65032938 65032937 65033008 65032938 65032937 65033008 71 AATAAAAAAAAAAGAAAAAAAGAAAAATCAGAAACAGTTATGTGTCAGAATTCAACTATTTAAGTACACAT ..x..........:......:.:....x...:..:xx.:.x.:x.x.........::.x.x..:..:.x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -45644385 -48586017 +3121 chr4 + 190214555 19402317 19402316 19402396 80 TACTTCAGGAAAAAAAGATAGGAAG-----------------TTAGGAAGGAAGAAAATTGAAGAAGAAAGAAAAAAAGAGGGAACAAAAGAAGAGA chr4 + 94230402 58978100 58978099 58978196 58978100 58978099 58978196 97 TACATAGGCAACAAAAAAGAGGAAGATCACAAAGAGGTTTGTTTTGGAAGCCAGGAAATTGAAGAAGGAAAAAATAAATGAGGAAAAAAAGGGGAGA ...x.x:.x..x....:.x......-----------------..x.....xx..:............:..:...x...x::....x.....::.... 25M17I55M 60/80 75.0% 97/94230402 0.0% 17/80 21.2% -39575783 -54654619 +3109 chr4 + 190214555 19422820 19422819 19422971 152 TGTGCAGAGAGAAAAA--------GAAAGAAAGAAGGAAGGAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGAGGGGGAGGGAG-GAAAGAAGGAAAAAAGGAAAGAAG chr4 + 94230402 18206564 18206563 18206724 18206564 18206563 18206724 161 TGCACAGACAGCAAAATCATTCATATAAGTGACAAAGAATCACAGAATTGTAGAACTAGAAAATAAATCGCAAGTTCCAGAAAACAGAGAGACAAAGGCTAAAAAAAATAAAAATAAAAGGCGGGGGGGGAGGGGGAGATAACTGGGTAAAAGCAAAACAG ..::....x..x....--------:x...x:.x..:...xx.x:...xx:x.:.:xx.....:x.:.xx.x...xxxx......x.......x.....xx::..::..x.:...x...:.:x..:.........:.-..x.:xx..:x.....x...:x.. 16M8I112M1I24M 95/152 62.5% 161/94230402 0.0% 9/152 5.9% 1216256 NA +3111 chr4 + 190214555 19422820 19422819 19422930 111 TGTGCAGAGAGAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAG chr4 + 94230402 15855370 15855369 15855480 15855370 15855369 15855480 111 TGTCCAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ...x..::::x...:...:....:x:::x...:...:xxx.:.x...xx.:::::....xxx.:.....:...:..:.:....::......x:.:.:::..x....:.::. 111M 63/111 56.8% 111/94230402 0.0% 0/111 0.0% 3567450 NA +3598 chr4 + 190214555 19422831 19422830 19423008 178 AAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGA--GAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGAGGGGGAGGGAGGAAAGAAGGAAAAAAGGAAAGAAGTAA---GAAAGGGAGGACGGAAGGAAGGAAGATTGGTTTT chr4 + 94230402 1317398 1317397 1317575 1317398 1317397 1317575 178 AAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCAC-----AAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTT ...x..x.::.x.::.xx.::.:.:.........:......:.:......x.:xx.:..x..:..:x.::.--...xx....:...:....:...:..x.x-----:..x....:.:.:xxx:..xxx.:...:.:.::.x...x.---...x..:.:::x:..:xx.....:::.:x..:.. 71M2I28M5D40M3I34M 103/173 59.5% 178/94230402 0.0% 10/173 5.8% 18105433 NA +3105 chr4 + 190214555 19422853 19422852 19422978 126 AAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAG-------AAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGAGGGGGAGGGAGGAAAGAAGGAAAAAAGGAAAGAAGTAAGAAA chr4 + 94230402 69368678 69368677 69368810 69368678 69368677 69368810 133 AAGAAAGGGAAAGGTGACACGGCAGGGTTATAGATTAAAGGCTTGTAAAGCTGGATGAATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAA ...:....:...:.x:.x.x:.x..::xx.x...xx..:-------...:xx.::x..:x:.:...::.::.......:..:..:.:.....::x.:x.....:.....:....x:.x:x.:.:.xx...... 39M7I87M 75/126 59.5% 133/94230402 0.0% 7/126 5.6% -49945825 -44284577 +3100 chr4 + 190214555 19422866 19422865 19422959 94 GAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGAGGGGGAGGGAGGAAAGAAGGAAA chr4 + 94230402 58935721 58935720 58935814 58935721 58935720 58935814 94 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA .:..x:.::.::...x.:x..xx...:.....x::....:......::x.:....:x....:...:..::.x::x.x::.:.:...::...... 94M 56/94 59.6% 94/94230402 0.0% 0/94 0.0% -39512855 -54717547 +3099 chr4 + 190214555 19422872 19422871 19422979 108 AAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGAGGGGGAGGGAG--GAAAGAAGGAAAAAAGGAAAGAAGTAAGAAAG chr4 + 94230402 91251587 91251586 91251696 91251587 91251586 91251696 110 AAAATAACAGGCATAGCACAAAGCAGAAAAGAGAAAAATATGAGGATGAAGGGAAAAAATTGGGAAGGGACTAAAGCTGAAAGAGGGAAAAGATGAAATAAATAATAAAG ..:.x:.x..:x.x..x.x:..:x.::.:.......::x.x..:.:x:...::.:...:xx....:...:xx::..--......:......:.x....x..:...x.... 76M2I32M 67/108 62.0% 110/94230402 0.0% 2/108 1.9% -71828715 -22401687 +3594 chr4 + 190214555 19424811 19424810 19424875 65 GTTGCGCACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGAAGAATTGCTTGAACCCAGAGGC chr4 + 94230402 76033201 76033200 76033265 76033201 76033200 76033265 65 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..x.:....x......:...........::.:......x.xx:x...x::............:.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -56608390 -37622012 +3077 chr4 + 190214555 19445943 19445942 19445984 42 GAGGGAGACTCTGTCTGAAACAAACAAACAAACAAAAAAAAA chr4 + 94230402 37558924 37558923 37558965 37558924 37558923 37558965 42 GAGGCAGACTCTATTTAAAACAAACAAATGAACAAAAAAAAA ....x.......:.:.:...........::............ 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -18112981 -76117421 +3013 chr4 + 190214555 19464219 19464218 19464268 50 TGATGCCCTCTTATTGTGTTGTTTTCCTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 87898181 87898180 87898230 87898181 87898180 87898230 50 TGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTTAA ..x...x:.....:.:.x:......:.....:.....:....:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -68433962 -25796440 +3736 chr4 + 190214555 19470374 19470373 19470447 74 GTGTGCCTATAGTCCCAGCTACTCGAGAGGCTGAGGCACGAGAATCCCTTGAACCCAGGAGGCCGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.:....:.........:..:........x.x:.x...x.x...........:..x::x:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -56562830 -37667572 +3040 chr4 + 190214555 19478737 19478736 19478818 82 GTGGTGGCACTCACCTGTAGTCCCAGCTACTTGGGAAACTGAGGCAGAAGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::.::.....x.xx:x...x::........x:.:..x.xx:..:..:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% -56554464 -37675938 +3614 chr4 + 190214555 19500565 19500564 19500639 75 CATACACATATACATGAATATATATACATATATACGTATATATGTATTTCT-TTATATCAGTGTGTTTCTTTATAT chr4 + 94230402 74526077 74526076 74526152 74526077 74526076 74526152 76 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGTTTCTGT ..:.....:.:.......:...:.:.x......................xx-..::x....xx..:..x...x.:. 51M1I24M 57/75 76.0% 76/94230402 0.0% 1/75 1.3% -55025512 -39204890 +3185 chr4 + 190214555 19525627 19525626 19525705 79 GTGGTGCACACCTATAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGAGAGGCCAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--.:....:.........:x::........x.xx.x...x.:........::::..x::x:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -56507574 -37722828 +3314 chr4 + 190214555 19531110 19531109 19531192 83 CATGGTGGCACACACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--....:.:...........::...:....x.xx.x...x::.........:.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -56502087 -37728315 +3227 chr4 + 190214555 19554317 19554316 19554399 83 GTTGCTGCCCTAGAGTTTACTAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT--------TTTTTTTTTTTT chr4 + 94230402 41650573 41650572 41650663 41650573 41650572 41650663 91 GTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTTTTCTTCTTTT ...x:x...:..x.x..:.:....:.................:.:.:.:.:.::...:..x.xxx..x...--------....:..:.... 71M8I12M 59/83 71.1% 91/94230402 0.0% 8/83 9.6% -22096256 -72134146 +3095 chr4 + 190214555 19554340 19554339 19554400 61 ATATATATATATATATATATATATATATATATATTTT----TTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823265 7823264 7823329 7823265 7823264 7823329 65 ACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT .:...:.........:.:......x.:.:x.x..:..----..:...x..:.............. 37M4I24M 48/61 78.7% 65/94230402 0.0% 4/61 6.6% 11731075 NA +3145 chr4 + 190214555 19554341 19554340 19554399 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -13696662 -80533740 +3178 chr4 + 190214555 19554366 19554365 19554428 63 ATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTCTGTTGCCCAGGCTGGAGTGCA chr4 + 94230402 58776842 58776841 58776904 58776842 58776841 58776904 63 ATATATACTTTTTTCTTTTTTTTTTTTTTTGCTTCTGACAGCTCTTGTCCAGACAGGAAGGTA .......:......:...............x:..:.xx.xx..x...:....:.x...:x.:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -39222476 -55007926 +3874 chr4 + 190214555 19559145 19559144 19559216 72 GCATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGTCCAGAAGTTCGAGGTTACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x......:...........::........x.xx.x...x.......::.......:.:x:..:.::.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -56474061 -37756341 +3038 chr4 + 190214555 19564867 19564866 19564941 75 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACAAACGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....:...x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -21547311 -72683091 +3548 chr4 + 190214555 19572642 19572641 19572702 61 GTGCACCTGTAATCCCAGCTACTCGGTAGGCTGAGGCACGAGAGTCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........:.:x........x.x:.x..:x.:...........:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -56460562 -37769840 +20174 chr4 + 190214555 19573076 19573075 19573772 697 CATATGTGAATACTGATTTTAAATTTCAG-CTGGGCTACATTTTACAGGC--GTTAAGAAACAATCATACTAGAAGAATAACAAATAGTGTAGAAGACTGCATAAATTGTATGCTTTTTATTTAGTTAGGTTTTCTGGCATTCCTGCAGAATATGGTTCTTATGAAAGATCATTTATTTCTTCATTAGGTGGTATTGGAATCCATTTAAGCAGAGGTGATATGGATCCAGA--CTCCACTGAATGGCCACACTGATTTAAGTGTCTTGGTCTTAAGTGGAGGCTACTCAAAATA--AAGACCAAGTATGAAAATATTCC-AGATGGAAATACTACTATGTTAGAGGTATTATGACTTTTCTTGTTAAATCTTCTCTAAAATTAACCCTTGGCTCAAACACTGCGGGTAAACAAGCATCACTTCAAGATATTTAGATCTATGGGTTCAATAGGGCAATATAGCAACTTA------TTTCAAAAGTAAAAATATCATGTGCGAAGATCAACTCTATTCCCTTGCCAAACAAAATTCCATTAACTAACTTAAATTGGACTTAATAACAATCACATAAACTAATTAGTTTCCATTTATAACTCCATTAGGAGTATTATTCATCACAGCATTGCCCGATAGAGCTGTGCTT-CTTCAGACTTTCAACAGATTAAAT---AAATATAACCTGGGGTGCTAATTATACAATGATGATGCAGA chr4 + 94230402 78179406 78179405 78180085 78179406 78179405 78180085 680 CACACATGGATATTGATTTCAAGTTTCAAACCAATCCATGTTTCA-AGACTAATTTAGGAACTATTACACTTGAAAAACAACAAATTGGGTAGAAGTACCCCTAAGCCCCAGTTTGCTTATTTAACTAGGCACTCATGCATTCCTGCCAAATCTGGTTTTCATGAAAGTCAATTTATTTGTTCATTATGTGACATTTGAAACCATTCAAGCAATTGTGAGGTGGGATTAAAGTCTCTGCTGTAGTATTTCACTGATTGAAATGCTTTGGCCATTTTTGGAGGAAACTTAAGACATGAGGATAGGGTATGAAAATGCACTGAAATATCAAAGCCACCTTATTGATAACATTGTAATTTTGTTGTGTTGATATGCTGTAAGGAT---------------TTCTGGGGG-------GTGTGGTCCTGATGTACTTAGAACTGGAGGATC-----TGAAAGATTGAAATTTAAGCCATTTTCAAAG-----AAAATTATCTGATAACATTAGCTCTGTTCCCCTGCCAAACAAAATTCCATTAACCAGCTGAAATGGGACTTAATAACAATCATGTAAACCAATTAGCCTCAATTTATAACTCCATTAGGAGCTTTATTCATCACCACATGGCTTTATAGAACTGTGCTTCCTTCTGATGTTTGGC-GATTAAATAACAAATAAGGTCTGGGGTACAAAACA-AAAATGCAAATGCAGA ..:.::..:...:......:..:.....:-.:::x.:.::...:.-..:.--:..x..:...x..:.:...x...:..:.......x.x.......xx:x.x...:::x:.xx:.x:.......::....:x:..xx..........x:...x.....:.:.......x:x........x.......x...::...x...x.....:.....:xx....x:...:x::.:.--...::...x.xx:::x........x..:..::....:.x.xxx......xx...:..:.:.--.:..:x::..........::x.:-.:..:xx..x:.:..:x.:..::x:::...:.:.:...x:.xxx.x:..x.x..x...::x.---------------:x...x...-------.::.x::::::.x:..:.....x..:x:..x..-----x.x..x..x.x..:...------.......:-----..x..:..x..xx..x..:.:....:.....:......................:.:..x....x.................::.....:......::..x....................:x...........x:...x..::x.....:........-....x..:x..:::.-........---.....x:::.......:.x..x:.-.x....xx:....... 29M1I15M1D4M2I179M2I61M2I23M1I62M15D9M7D33M5D17M6I8M5D159M1I15M1D8M3I24M1D16M 449/662 67.8% 680/94230402 0.0% 53/662 8.0% -58606330 -35624072 +3182 chr4 + 190214555 19591980 19591979 19592099 120 GTGGTGGCATTCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACATGGGAGGCAGAGGTTGCAG----------TGAGCAGAGATTGTGCC-----ACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033201 76033200 76033328 76033201 76033200 76033328 128 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG-TGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......-----...x....:.:...........::........x.xx.x...x::.......x::.:..x:xx:..:..:..----------::......x:-......-----x....x.-.....x....... 6M5D71M10I10M1D6M5I7M1D13M 83/113 73.5% 128/94230402 0.0% 22/113 19.5% -56441221 -37789181 +4008 chr4 + 190214555 19592100 19592099 19592232 133 AGAGCGAGACTAGAAAGAGAGAGAGAGAGAGAGAGAGACACTGAGAGAGAGAGAGAGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA-----GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGTC chr4 + 94230402 17246057 17246056 17246193 17246057 17246056 17246193 137 AGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAA-GCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATC ...::..:::x.x.:x:::.....:...:..x......:::.::....x.:.:x:x...xx...:x....-.xx...:..........:.::.:-----..::.....:....x..:.x..x......::.:.x.:.. 70M1D23M5I39M 83/132 62.9% 137/94230402 0.0% 6/132 4.5% 2346043 NA +3586 chr4 + 190214555 19613269 19613268 19613334 66 GTGGTGCATGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--....:.:.:.........::........x:xx.x...x.............:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% -56419932 -37810470 +3096 chr4 + 190214555 19641645 19641644 19641714 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -56391552 -37838850 +3004 chr4 + 190214555 19641789 19641788 19641867 79 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGATGTCCAAATATTTAAAAGTTATATGCCACTT chr4 + 94230402 31996650 31996649 31996728 31996650 31996649 31996728 79 AAAAAAAAACAAAAAAAAAACAAAAAACCACCAAAGAGAAGCACCAGGTTTCAAAACAGTCACTAATTGTGTACTAATT .........x..........x......xx.xx...:.:..:x.x...:.x..x...:.x.:.xx.:..:.:.:.:.x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -12354861 -81875541 +3111 chr4 + 190214555 19648982 19648981 19649032 51 TTCTTATGTTTCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT chr4 + 94230402 12085028 12085027 12085078 12085028 12085027 12085078 51 TTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACT ....xx......x.............:....:......:.:.:.:..:x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 7563954 NA +3096 chr4 + 190214555 19656737 19656736 19656806 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAACGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:.........:.::........x.xx.x...xx:.x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -56376460 -37853942 +3090 chr4 + 190214555 19665837 19665836 19665967 131 ATAATGCATATGACTTGATGTGTGTGTATGTGTGTGTATGTGTATAGTTTTCCAGAAAGAAAGAAATG----------AAAACTTTGTCAGTGTGCCCTGAAGAAAGATTTTTTTAGGAACAAATTATTCTAGAATGTCCA chr4 + 94230402 8684322 8684321 8684449 8684322 8684321 8684449 128 ATAATACATATAGCTCTATGTGTGTATCTGTGTGTGTATATATATAAATAGCTACTGTGACA-AAATGAGTAACTCATAAAAGTTTATCATTT------------AAACCCTTGCAGAAATCAACCACTATACAATGTCCA .....:.....::..:x........:.x...........:.:....:x.xx.:.xx:x..x.-.....----------....x...:...x.x------------.:.:::..x:..:..:x..::.:.x..x........ 62M1D5M10I15M12D36M 81/118 68.6% 128/94230402 0.0% 23/118 19.5% 10981515 NA +3035 chr4 + 190214555 19666593 19666592 19666649 57 AAGTCTATTTCCTTTTCTTCTTCTTTTTTTTTTTTTCTTTTAAACATCTGTGTTTGG chr4 + 94230402 45914199 45914198 45914255 45914199 45914198 45914255 57 AAGAATACCATCTTGTTTTCTTCTTTTTTTTTTTTTCTTTCAGAAAGTTGTGTTTAG ...xx..::x:...x.:.......................:.:.x.x:.......:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -26247606 -67982796 +4234 chr4 + 190214555 19689141 19689140 19689294 154 TATGACACACAGTAATTTCC---CTTTCTTTCTTTCCTT--------------------CTTTCTTTCTTTCCTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTT chr4 + 94230402 63697058 63697057 63697239 63697058 63697057 63697239 182 TATGAATTTCAGTAATTTCCATGCTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .....xx:x...........---.......x:.x.x:..--------------------....x..:..:.....::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx...:......::::::.....:....:....:.x... 20M3I16M20I18M5I100M 103/154 66.9% 182/94230402 0.0% 28/154 18.2% -44007917 -50222485 +3478 chr4 + 190214555 19689157 19689156 19689258 102 TTCCCTTTCTTTCTTTCCTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTC------TTTCTTTCTTTCTTTCTCTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....::.:.....:xx:x..:.:.....:......:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..------..........:....:.x... 60M5I11M5I10M6I21M 74/102 72.5% 118/94230402 0.0% 16/102 15.7% -44007965 -50222437 +3044 chr4 + 190214555 19689159 19689158 19689242 84 CCCTTTCTTTCTTTCCTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::.......::..x:::..x..:.:...::.:::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -37682867 -56547535 +3079 chr4 + 190214555 19689164 19689163 19689246 83 TCTTTCTTTCCTTCTTTCTTTCTTTCCTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCT-CCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......:...x.::..x..:.-......::....-x:.x..x.:.........:...::...x.....x..xx:.x..... 24M1D12M1I46M 59/82 72.0% 83/94230402 0.0% 2/82 2.4% -37682863 -56547539 +3066 chr4 + 190214555 19689168 19689167 19689250 83 TCTTTCCTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:....:..::..x.::..x....:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -37682859 -56547543 +3875 chr4 + 190214555 19689173 19689172 19689290 118 CCTTCTTTCTTTCTTTCC-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x..:..:..:..:.-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx..........:.:::..:.......::....:.x.:. 18M5I100M 75/118 63.6% 123/94230402 0.0% 5/118 4.2% -44007944 -50222458 +3308 chr4 + 190214555 19689180 19689179 19689263 84 TCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.......:...x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x.:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -37682847 -56547555 +3884 chr4 + 190214555 19689181 19689180 19689302 122 CTTTCTTTC-CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:.-..:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....:..x.xx.........::.::::.........:::.:.:.x... 9M1I113M 77/122 63.1% 123/94230402 0.0% 1/122 0.8% -44007936 -50222466 +3520 chr4 + 190214555 19689185 19689184 19689306 122 CTTTCCTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x:.:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::..x..:.:..x.xx...:.:....:.:.::.....:.:.::..:...x.:. 13M1I109M 74/122 60.7% 123/94230402 0.0% 1/122 0.8% -44007932 -50222470 +3672 chr4 + 190214555 19689193 19689192 19689312 120 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTT--TCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTCTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....--x.::.:x..:....x.xx...:...:..::::::.....:....:..:.:.x... 13M1I52M2I55M 77/120 64.2% 123/94230402 0.0% 3/120 2.5% -44007924 -50222478 +3414 chr4 + 190214555 19689195 19689194 19689366 172 TTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTCTCTCTTTCCCTCCCTTCCTCCCTTCCTTTCCTCCTCCCTTC-CTCCCTTCCTTCCCTCCCTT chr4 + 94230402 3415300 3415299 3415465 3415300 3415299 3415465 166 TTCTTTCTGGAGCTGTCTTTCCTTTCCTATT-CTTTTTTCATTCCTAGTCCTATTCCTTTCACATTCCTATTCAATTCCTATTCCT-TCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTT-------TGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCTCCCCACCCTT ........xx--..x......:..:::.x..-....:..:x..:..xx:::.x..:.....x.x...::x:..xx..:..x..:..-....xxxxxx.:::...:.....x.........-------.x:...:..:..x.xx.:.x....x:.-...:..::..:...x..... 10M2I19M1D54M1D33M7D27M1I20M 106/163 65.0% 166/94230402 0.0% 12/163 7.4% 16273895 NA +3786 chr4 + 190214555 19689197 19689196 19689312 116 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTC--TCTTTCTTTCTCTTTCTCTCTTTCTCTCTCTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx...:.x...:xxx.::..x..:....x.--.......:..:.:.::.:.......::..:... 13M1I70M2I33M 76/116 65.5% 119/94230402 0.0% 3/116 2.6% -44007920 -50222482 +3322 chr4 + 190214555 19689199 19689198 19689298 100 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.:.:x.xx...:...:..:.:.::.:........:..:...x.:. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% -44007941 -50222461 +4481 chr4 + 190214555 19689202 19689201 19689397 196 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTCTTTCTCTCTCTCTTTCTC---TTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTCTCTCTTTCCCTCCCTTCCTCCCTTCCTTTCCTCCTCCCTTCCTCCCT---------TCCTTCCCTCCCTTCCTTCCTTCCTTGCTTCATTCCTTCCTTCCT chr4 + 94230402 67728277 67728276 67728483 67728277 67728276 67728483 207 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTT--TTCATCCACCTCCTCCT .....x:..x....:....xx:.::..:x.......x.x...-.x::.....:.:..:.:..x:x:.:.....---......:..x:.:x...x..x..x::::.x::x..:.::..x..:::.x.:..xx.:........x...::...x:.x:---------...xx:........xx:.....::..--.....:.x:::.:.... 42M1I30M3I79M9I26M2D17M 120/194 61.9% 207/94230402 0.0% 15/194 7.7% -48039075 -46191327 +4281 chr4 + 190214555 19689214 19689213 19689417 204 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTC---TTTCTCTCTTTCTCTCTCTTTCCCTCCCTTCCTCCCTTCCTTTCCTCCTCCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCTTGC-----TTCATTCCTTCCTTCCTTTCTTTCTTCCTTTCCATCT chr4 + 94230402 67728277 67728276 67728477 67728277 67728276 67728477 201 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGC-----CTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTAC------TACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCT .....x:..x....:....xx:.::..:x.......x.x..:x.x.-----......:.:..:.:..x:x:.:.....---......:..x:.:x...x..x.:x::...x.------.x......:.x..:::.x.:..xx.:...:....x::::..:.x.:x.:::.-----.:..x....:....xx:.:....:..:::x....:.. 46M5D27M3I31M6D52M5I37M 119/193 61.7% 201/94230402 0.0% 19/193 9.8% -48039063 -46191339 +3129 chr4 + 190214555 19699697 19699696 19699784 88 TTTATTTTCCAAGGCATTAAGGAAAAACTCTTCTAAAATGTCATTC------AAAAATGTTTCTAATTTTGTTCAGTTGCTGAATTTTGCCTTG chr4 + 94230402 84331724 84331723 84331817 84331724 84331723 84331817 94 TTTACTTCCCAAATCATAAAAAAAAAAGTCTTCTAAAATGTCATTTAAGAGGAAAGAAGTTTCTTCTCTTACATAGCTCACCTGTTTTGTTCTG ....:..:....:x...x..::.....x.................:------...:.x......xx.:..::x:..:.xx:xx:.....:::.. 46M6I42M 60/88 68.2% 94/94230402 0.0% 6/88 6.8% -64632027 -29598375 +3230 chr4 + 190214555 19712334 19712333 19712441 108 GGAAAAGA--------TGTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTCAATGCTATAACACTATCACTA------TACTAGTAAAATTCCAGATTCAGTTTCGGGGACACTCATGAAAACC chr4 + 94230402 84639532 84639531 84639653 84639532 84639531 84639653 122 GGAAAAGACTCAGAAGTGTTTTTTTTTGTTTGTTTGTTTGTTTTTTTTCCCTTCTGTCAGACTGTCTTtgacccatccctggaaaaaattcaaggtcagctacaatggagctctaaacaacc ........--------.......x....................x....xx.x..:.x.x...:..x:.:------:x..:.x....x.:..::x....:.x.::x.:x:...xx:.x.... 8M8I54M6I46M 75/108 69.4% 122/94230402 0.0% 14/108 13.0% -64927198 -29303204 +3443 chr4 + 190214555 19727426 19727425 19727481 56 GTGCACTTGTAGTCCTAGCTACTTGGGAGACTGAGGCAAGAGAATCACTTGAACCC chr4 + 94230402 76033204 76033203 76033259 76033204 76033203 76033259 56 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC ......x......:.:.........::..:.....x.xx.x...x........... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -56305778 -37924624 +3218 chr4 + 190214555 19772393 19772392 19772455 63 CAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAACTCCAGTAATATAATGA chr4 + 94230402 54113487 54113486 54113549 54113487 54113486 54113549 63 CAGAAAAAAAAAAAAAGAAAAAATGCATAAAGATAGAAAAAGCAAGCATTAGCAATTCAATGA ..:.............:......x.x.x.:.:.x........x..:.x::..:...x:..... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -34341094 -59889308 +3127 chr4 + 190214555 19775677 19775676 19775759 83 CATGGTGGCACACACCTGTAGTCCCAGCTACCCAGGAGGCGGAGGCAGGAGAATCACTCGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:........:::::....x...x.xx.x...x....:......:.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -56257520 -37972882 +3376 chr4 + 190214555 19814429 19814428 19814499 71 CGCAGTGACATGTATCTGTAATCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCACTTGAACCTGGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:.....:--..:.:x....:.:...........:x........x.xx.x...x..........::..:.. 8M2D61M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -56218768 -38011634 +13241 chr4 + 190214555 19823789 19823788 19824105 317 TGTGTGTATTTATAGTTGACTTTGACTTTCTTACAATTATTTAATAAGGCAGGCTCGCTATATTACTCTCATGATCTAAGAGCCTGTAATCTCTCTGGAGTCTAATTATCTCCCGATAACCTTGCCCCTTGACGACATTTGTATTACTATTATAAAACATGTTTATTTTGGGAAAGGACATATATTTTGTGGTGTAATAGCATTAAACTGTCAGACCTGAGTGTT-AACAGCAATTTGCCC---TAAGAGCTTTCAGAAAAGATTAGCTCAGGCATTATATGGGGCTTATCAGACAATCTAAGGGGCTCAAAAGACATTTT chr4 + 94230402 78092454 78092453 78092773 78092454 78092453 78092773 320 TATGGGTATTTATACTTGGCTGTGGCAGACTTGTAATTATTTAATAAGGCACACCAAAGATAAGGTTATCATGATATAAGTGCCTGTAATTCCTCTGGAGTGTAATTGCCTCATGATAACCTCATCCCTTGAAGTTGTCTCTATTGCTAATATGAAAGATGTTTGTTTTCAGTAGGAACATATATTTTGTGAAAGAACAGCATTAAACTGTCAGACCAAAATGTTAAACAGCAGTTGGAATAAGCAGAAGGGTTCAG-ATGGATTAACTCAGCCCTCATAGACGGTTCACCAGATGAACTGAAATGATCCAAAGTCATTTT .:..x.........x...:..x..:.xxx...::.................x:.:x:xx...xx::.x.......x....x.........::.........x.....::...x:........:::.......x.x::.:.x....:...x...:...x......:....x:.x.:.:..............:x:x..:...................x:.:....-.......:..x.xx:---:.::..xx.....-.x:.....:.....x.x.:...x:x..:.:.:....::.x..:.::x.x..x....x...... 225M1I15M3I13M1D63M 225/316 71.2% 320/94230402 0.0% 5/316 1.6% -58268665 -35961737 +3504 chr4 + 190214555 19825368 19825367 19825446 79 GTGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTGGAGCTCAGGAAGCTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--......:...........::........x.xx.x...x.x..x..:.:...:.:x:.x:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -56207833 -38022569 +3399 chr4 + 190214555 19838716 19838715 19838819 104 GGCTATGTTTTGTATTTTTGT--AGTTGTGTGATCTTGGACAAGTTATTTTATCTATTTTAGCCTCAGTGTCCTCATATTTATAATAT-GAATATGTTAGTTATCCA chr4 + 94230402 79037087 79037086 79037193 79037087 79037086 79037193 107 GACTATAAATTTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTCCA .:....:xx..x.....:..x--..:...:...:...:.:x............:...:.x..::...:.x:.::..x:.x..x...:.-...x..:x.::..x.... 21M2I65M1I18M 70/104 67.3% 107/94230402 0.0% 3/104 2.9% -59198371 -35032031 +3134 chr4 + 190214555 19867509 19867508 19867603 95 TTCTTTTTACTCTTTTTTCTTTAAACTTCTCTTCTTGTTTTATTTCATTAATTTGATCTTCAGTCACTGATACCCTTTCTTCCACTTGAT--CAAAT chr4 + 94230402 54623004 54623003 54623100 54623004 54623003 54623100 97 TCCTCTTTACTTTTTTTTTTTTTAACTTTTTTTTTTGTTTTGCTTTGGTTGGTTGGTTTTTTGCAAACGTGACTTAATTTGACACTTGATGGCAAAT .:..:......:......:...x.....:.:..:.......::..::x.x:x...:.:..:x.:x.x:.xx..::xx.:.xx........--..... 90M2I5M 62/95 65.3% 97/94230402 0.0% 2/95 2.1% -34755495 -59474907 +3036 chr4 + 190214555 19905012 19905011 19905075 64 CTCACAGT--CACGGCAGAAGATGAAGGAAGGAGCAAAGGGTGGTGGCAGGCAAGAGAGAGCATGT chr4 + 94230402 61099839 61099838 61099904 61099839 61099838 61099904 66 CTTACAGTGAAAAGGCTACAGATGAGAGGAGGAGCGAAAGGTGCTGGCAAGCAATAGTGGGCATGT ..:.....--x.x...x:x......::.:......:..:....x.....:....x..x.:...... 8M2I56M 48/64 75.0% 66/94230402 0.0% 2/64 3.1% -41194827 -53035575 +4066 chr4 + 190214555 19924279 19924278 19924357 79 GTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--......:...........::........x.xx.x...x.............:.:x.xx:..:..:.. 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% -56108922 -38121480 +3090 chr4 + 190214555 19934515 19934514 19934592 78 GCTAGTATAACATTTACAAAAACAAACAAACAAACAAACAAACAGAAAATAACAAGTTGGCAAGGATATGGAGAAATT chr4 + 94230402 78036095 78036094 78036172 78036095 78036094 78036172 78 GTCAGGGTGGCATACTTAAAAACAAATAAACAAACAAAAACCCCCAAAACCAGAAGCTGGCAAATACACAGAGAAACT .::..x:.::...x:x:.........:...........x.xx.xx....:x.x...:......:x.:.::......:. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -58101580 -36128822 +3634 chr4 + 190214555 19939529 19939528 19939607 79 GTGGTGTTTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTTGAGAATCGTTTGAACCTAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:x:.--......:...........::........x.:..x...x.::.......:..:.:x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -56093672 -38136730 +3086 chr4 + 190214555 19948468 19948467 19948593 126 TTGCAGAGTCATTGTAAGAATAATAAAAATAATAAAATA--------ATAAATATGA------------TAAAAATA------ATAAAATCACACACTTATGTACACATACACACATAAATACACATACATATTTACGTATATACATATATA chr4 + 94230402 74525979 74525978 74526126 74525979 74525978 74526126 148 TTGAAAAGTTATTGTCTGAA----AAAAACAGTATTATATAGTCTGTATAAACCTAGAGGACACTTTCCTGAAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ...x.:...:.....xx...----.....:.:..xx...--------.....:x.::------------.:......------..x:..xx....xxxx..x:.....:........:..:.:...:.x....x..........::...x.. 20M4D15M8I10M12I8M6I69M 88/122 72.1% 148/94230402 0.0% 30/122 24.6% -54577511 -39652891 +3261 chr4 + 190214555 19962286 19962285 19962342 57 TTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCAAACACCTT chr4 + 94230402 90233443 90233442 90233499 90233443 90233442 90233499 57 TTGAAACACCATTACAAAAAGAAAAAAAAAAAAAAAAGGCAATAATTCTAAAACCTT ....:..x..:.:x......:................::x..x.....x..x..... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -70271157 -23959245 +3150 chr4 + 190214555 19987202 19987201 19987244 43 GCTCTAAATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409080 4409079 4409122 4409080 4409079 4409122 43 GCTGTACATATATATATATATACACACACAGAGACACACACAT ...x..x.......................x.x.......... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 15578122 NA +3033 chr4 + 190214555 20020648 20020647 20020715 68 GGAGAAACAGCAAGGTCCTATCTCAAAACACACACACAGACACACACAGACACACACACACACACACA chr4 + 94230402 66743611 66743610 66743678 66743611 66743610 66743678 68 GGTAAAACAGATAGGTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACA ..x:......xx....x..x.x.x..x.x.:...:x:.x..x...x...:.................. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -46722963 -47507439 +3264 chr4 + 190214555 20038284 20038283 20038360 77 TGTGTGTATATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATAT chr4 + 94230402 5214245 5214244 5214321 5214245 5214244 5214321 77 TGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x..:.:.:.:..x.::..:...::..x..::.:.:....:.:.x.::.:......:..::.x.......:.:.. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% 14824039 NA +3322 chr4 + 190214555 20038285 20038284 20038402 118 GTGTGTATATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTATATAT chr4 + 94230402 5214204 5214203 5214321 5214204 5214203 5214321 118 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...::x:.:.::x:...x.:.:::..x::.....:::::x....x.::.:.::::.x..::.:....::.x.::..:.:....:.:.x.::.:......:..::.x......::.:.. 118M 63/118 53.4% 118/94230402 0.0% 0/118 0.0% 14824081 NA +3528 chr4 + 190214555 20038285 20038284 20038374 90 GTGTGTATATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATAT chr4 + 94230402 5214232 5214231 5214321 5214232 5214231 5214321 90 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ......::::.x:.:.x..:.:.:.:..x.::..:....::.x.::..:.:....:.:.x.::.:......:..::.x.......:.:.. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 14824053 NA +3314 chr4 + 190214555 20038286 20038285 20038388 103 TGTGTATATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATAT chr4 + 94230402 5214219 5214218 5214321 5214219 5214218 5214321 103 TGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..x.:.:::..x::.....::::.x:.:.x..:.:.::::.x..::.:....::.x.::..:.:....:.:.x.::.:......:..::.x.......:.:.. 103M 58/103 56.3% 103/94230402 0.0% 0/103 0.0% 14824067 NA +4367 chr4 + 190214555 20038297 20038296 20038413 117 ATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTATATATATGTGTGTATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATAT--GTGTATGAATATGCATGCACA ..x..:x....:..:.:...x.x.:..x.:....x.......::x:.:.....:x:.....:x....:..:....:x:..::x.x...:.....--......:x.....::..:.:. 94M2D21M 77/115 67.0% 115/94230402 0.0% 2/115 1.7% -1070890 -93159512 +3130 chr4 + 190214555 20038299 20038298 20038367 69 ATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.::.:::.:::.:x........x......:..::...........:..x...:.::..x.:.:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -66595624 -27634778 +3902 chr4 + 190214555 20038308 20038307 20038421 114 TATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTATATATATGTGTGTATATATATATG chr4 + 94230402 21109194 21109193 21109297 21109194 21109193 21109297 104 TATACATGTGTGTCTCTGTGG----------GCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ....:......:.x.x....x----------.:....x.......::x:.:.....:x:.....:x....:..:....:x:..::x.x.:.:.........:.:x....::... 21M10D83M 71/104 68.3% 104/94230402 0.0% 10/104 9.6% -1070886 -93159516 +3514 chr4 + 190214555 20038313 20038312 20038381 69 ATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.::.::...:...x:.......x......:..::...........:..x...:.::..x.:.:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -66595610 -27634792 +3073 chr4 + 190214555 20038319 20038318 20038366 48 ATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGT chr4 + 94230402 65759989 65759988 65760036 65759989 65759988 65760036 48 ATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x....x....:...:......:...:..:.x........:...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -45721670 -48508732 +3195 chr4 + 190214555 20038322 20038321 20038383 62 TGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:...::..x:...:...x.:....:...:....:......::.x.....::..x...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -66595608 -27634794 +3141 chr4 + 190214555 20038330 20038329 20038380 51 TATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGT chr4 + 94230402 65759986 65759985 65760036 65759986 65759985 65760036 51 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x..x....x....:...:......:...:..:.x........:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -45721656 -48508746 +3317 chr4 + 190214555 20038334 20038333 20038395 62 TATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .::...:...x:.......x......:..::...........:..x...:.::..x.:.:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -66595596 -27634806 +3095 chr4 + 190214555 20038336 20038335 20038396 61 TGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGT chr4 + 94230402 86633930 86633929 86633990 86633930 86633929 86633990 61 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:...::..x:...:...x.:....:...:....:......::.x.....::..x...:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -66595594 -27634808 +3141 chr4 + 190214555 20038344 20038343 20038394 51 TATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGT chr4 + 94230402 65759986 65759985 65760036 65759986 65759985 65760036 51 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x..x....x....:...:......:...:..:.x........:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -45721642 -48508760 +3570 chr4 + 190214555 20038348 20038347 20038409 62 TATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTATATATATGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .::...:...x:.......x......:..::...........:..x.....::..x...:.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -66595582 -27634820 +4145 chr4 + 190214555 20038368 20038367 20038465 98 TGTATATATATGTGTGTATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATGTGTGTA----------TATATATATGTGTATATATATATATG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x....:........x.x.:.:x.:....x.......::x:.:.....:x:.....:x....:..:....----------.:.:...........:x....::... 72M10I26M 70/98 71.4% 108/94230402 0.0% 10/98 10.2% -1070822 -93159580 +3215 chr4 + 190214555 20038374 20038373 20038490 117 TATATGTGTGTATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATATATGTGTATATATATATATGTGTATATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .::.x.....:x:..:x::::.:..x::.:....:.:.x:.:.x.::::::.:..x..:....:.::..x.::......:.::::.x.::.....:.::..::.x......::.:.. 117M 62/117 53.0% 117/94230402 0.0% 0/117 0.0% 14824169 NA +3439 chr4 + 190214555 20038376 20038375 20038437 62 TATGTGTGTATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .::...:...x:.......x.:....:...:....:......:..x.....::..x...:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -66595554 -27634848 +3021 chr4 + 190214555 20038384 20038383 20038434 51 TATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATGT chr4 + 94230402 65759986 65759985 65760036 65759986 65759985 65760036 51 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x..x.:..x....:...:......:...:..:.x........:...... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -45721602 -48508800 +3442 chr4 + 190214555 20038395 20038394 20038506 112 GTATATATATGTGTGTATATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATATATGTGTATATATATATATGTGTATATATATATATGTGTGTATAT chr4 + 94230402 5214210 5214209 5214321 5214210 5214209 5214321 112 GTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.::x:...x.:::::..x::.:....:::.x:.:.x..:::.:.:..x..:......::..x.::......:.::::.x.::.....:.::..::.x.......:.:.. 112M 62/112 55.4% 112/94230402 0.0% 0/112 0.0% 14824185 NA +3199 chr4 + 190214555 20038402 20038401 20038462 61 TATGTGTGTATATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATAT chr4 + 94230402 86633930 86633929 86633990 86633930 86633929 86633990 61 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .::...:...x:.....:.x......:..::...........:..x...:.::..x.:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -66595528 -27634874 +3430 chr4 + 190214555 20038404 20038403 20038465 62 TGTGTGTATATATATATGTGTATATATATGTGTGTATATATATATGTGTATATATATATATG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:...::..x:.......x.:....:...:....:......:..x.....::..x.:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -66595526 -27634876 +3055 chr4 + 190214555 20038474 20038473 20038521 48 TATATATGTGTATATATATATATGTGTGTATATATATATACCAAAGTT chr4 + 94230402 48958675 48958674 48958722 48958675 48958674 48958722 48 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTT .:.:.:.x......:.....................x...:x:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -28920201 -65310201 +3424 chr4 + 190214555 20079815 20079814 20079895 81 ATAAATCACTTTGAGAATATATATATATGTATATATATGTATATATATATGTATATATATGTATATATATGTATATATATG chr4 + 94230402 41213859 41213858 41213939 41213859 41213858 41213939 81 ACAGATCAGCTGGAGAAGTTATTTGTATGTACATATGTGTACATGTACAGTAATTCATATGTTCATGTGTGGATACATATG .:.:....x:.x.....xx...x.:......:....:....:..:..:.xxx..x:......x:..:.:..x...:..... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -21134044 -73096358 +3640 chr4 + 190214555 20079823 20079822 20079950 128 CTTTGAGAATATATATATATGTATATATATG----TATATATATATGTATATATATGTATATATATGTATATATATGTATATATATGTATATATATGTATATATATAAGTATATATATATATGTATATATAT chr4 + 94230402 91738164 91738163 91738295 91738164 91738163 91738295 132 CTATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..x..:.:::.....x......x.x:x....----:.....x......x.x:x.:..x.xx.....x...::........xx...x:x.x:.x..::x.x...:...x:x.x.:.....:...x:....... 31M4I97M 84/128 65.6% 132/94230402 0.0% 4/128 3.1% -71658341 -22572061 +3762 chr4 + 190214555 20079823 20079822 20079950 128 CTTTGAGAATATATATATATGTATATATATG----TATATATATATGTATATATATGTATATATATGTATATATATGTATATATATGTATATATATGTATATATATAAGTATATATATATATGTATATATAT chr4 + 94230402 91734566 91734565 91734697 91734566 91734565 91734697 132 CTATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..x..:.:::.....x......x.x:x....----:.....x......x.x:x....x.xx.....x...::........xx...x:x.x:.x..::x.x...:...x:x.x.:.....:...x:....... 31M4I97M 85/128 66.4% 132/94230402 0.0% 4/128 3.1% -71654743 -22575659 +3153 chr4 + 190214555 20111387 20111386 20111500 114 TAACAGCATTCTGGGTTTTTTTTTTTATTTTTTTACCCCCTCCCTCACTCTTACAGCATTTTTAATTTAGCATTCCTTTGTCCTCACTGACTTTATATCCCATTTTCTGAAATT chr4 + 94230402 57372012 57372011 57372125 57372012 57372011 57372125 114 TAAGAACATGCTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGATATT ...x.:...x....x.....:....:x.x.:::.::..:.:::...x..:.x..x..xx....xx...xx.x:...:...:::...:.::..x.x.x..x:...x.:x..x... 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% -37260625 -56969777 +3219 chr4 + 190214555 20111554 20111553 20111670 117 TATTTTCCAGGATTTTTTTTTCATTTTTGAATAATGCTCTGACAAGACTGTACTTCAAAATAAGAGAAAAGAAACCCAAAAAACAAAAAGAAAAAGCAACTTGTAGGAAAAAAATGT chr4 + 94230402 43251744 43251743 43251848 43251744 43251743 43251848 105 TATTCTTTAG----TTTCTTCCATCACTAAGGAATATT---AAAAGACTCTG-----GAGAAAGTAAAAAGAAACCCAAAAATCAAAAAATAAAAACACTTTTCACAAAAGAAATGT ....:.::..----...:..:...:x:.:.:x...::.---.x......x.:-----:.:x...x:................x......:x....:..x:..x:.x:...:...... 10M4D24M3D11M5D60M 73/105 69.5% 105/94230402 0.0% 12/105 11.4% -23140190 -71090212 +3036 chr4 + 190214555 20112618 20112617 20112669 52 TTCAAAAACAACAACAACAACAACAAAAGAAAACAAAACAAAACAAAAACAG chr4 + 94230402 90778255 90778254 90778306 90778255 90778254 90778306 52 TTAAAAAAGAACAACGACAACAACAACAAAAAACAGCACAAAATGAGAAAAG ..x.....x......:..........x.:......:x......::.:..x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -70665637 -23564765 +3006 chr4 + 190214555 20112621 20112620 20112666 46 AAAAACAACAACAACAACAACAAAAGAAAACAAAACAAAACAAAAA chr4 + 94230402 14362615 14362614 14362660 14362615 14362614 14362660 46 AAAAGCAACAACAACATCAACAAAAACAAAAAAAATGAAATAAAAA ....:...........x........:x...x....::...:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 5750006 NA +3672 chr4 + 190214555 20112809 20112808 20112883 75 GGGGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGACAGAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x......:.:.........::........x.xx:x...x.:...........:..x:xx:..:..:.. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -55920394 -38310008 +3611 chr4 + 190214555 20134394 20134393 20134546 153 AGGAGAAGAAGAAGGAGAAGAAGGAGGAAGAAGAAGGAGGAGGAAAGGAAGAAGAAGGAGAAGGAGGAGGAGAGGAAGAAGAAGAAGGAGGAGGAGAAGATGAAGGAGAAGGAGGAGAAGAAGAAGGAAGAAGAA-GGAGAAGAAGAAGAAAGA chr4 + 94230402 14751858 14751857 14752007 14751858 14751857 14752007 150 AGGAGATCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAA--GAAGGGGA--GATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAA ......xxx.:x..:....:x.::xx..:.x..x:..:.:.:..::x.:.....x:x..:..x:.::x:x.:...x................xx.:..:--.....:..--..x..:...x.::..x..:.xx..-.....x:..:...::.:. 99M2D8M2D24M1I18M 93/149 62.4% 150/94230402 0.0% 5/149 3.4% 5382536 NA +3122 chr4 + 190214555 20134509 20134508 20134583 75 AGAAGAAGAAGGAAGAAGAAGGAGAAGAAGAAGAAAGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAAAAGAAA chr4 + 94230402 66803520 66803519 66803594 66803520 66803519 66803594 75 AGATAAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAAA ...x:...x..::.:.::..::.:............:......:.x..x...x:.:.:::..:x....x.x:... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -46669011 -47561391 +3880 chr4 + 190214555 20171051 20171050 20171208 158 TGTGTATGTGTATGTGTGTGCATACATATACACACACATATACAAACATTTGTATGTCTGTGTATATATATACACACACGTATATACA-----TTTGTCTGTGTGTCTATACATATATATATAACATTTGTCTGTGTCCATATATATGTGTCTGTACATATAT chr4 + 94230402 79265522 79265521 79265673 79265522 79265521 79265673 152 TGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-----ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCAT-----TTCTGTAAGTGCTCA-GCACTTGTATTTATACATTTAT .....:....:.........xx.::.......:....:.:.:..x..::xx::..:.:.....x:.:.-----....x:x......x.-----....:..x.x..xx.:....x..::..-----x.:...xx...::..-::.:x...:.:.:.....x... 68M5D15M5I27M5D15M1D22M 98/147 66.7% 152/94230402 0.0% 16/147 10.9% -59094471 -35135931 +3380 chr4 + 190214555 20171074 20171073 20171132 59 ACATATACACACACATATACAAACATTTGTATGTCTGTGTATATATATACACACACGTA chr4 + 94230402 22600210 22600209 22600268 22600210 22600209 22600268 59 ACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....::.x.....:::.......x..x.....:.:.....:.:.....:..::...... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -2429136 -91801266 +3459 chr4 + 190214555 20179652 20179651 20179730 79 GTGGTGGATGCCTATAATCCCAGCTATTTGGAAAGCTGAGGCAGGAGAATCACTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:.--.:..:.:.......:...:..:......x.xx.x...x.............:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -55853549 -38376853 +3273 chr4 + 190214555 20210010 20210009 20210112 103 AAAGCTTTGTTTAAAAAAAAAGAAAAGAAAAAAGGAAACAAGAAAAGGGGAGAGGGAGACAGGC-AGGCAGGGA-GGGAGGCAGGGCAAAAACATAGGAAGAAAA chr4 + 94230402 73744705 73744704 73744809 73744705 73744704 73744809 105 AAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAGTCATATTTTTCAGAAAAAGA .....x.x:x:....::....::....::...:..:..x:...........:.:..:.:x:..:-:.......:-..:.:...:.x..x.xx:x.x:...:..:. 64M1I9M1I30M 66/103 64.1% 105/94230402 0.0% 2/103 1.9% -53534695 -40695707 +3139 chr4 + 190214555 20211780 20211779 20211819 40 CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -55036269 -39194133 +3353 chr4 + 190214555 20211782 20211781 20211821 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -55036267 -39194135 +3476 chr4 + 190214555 20211784 20211783 20211822 39 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..::................................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% -55036265 -39194137 +3140 chr4 + 190214555 20211786 20211785 20211824 39 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACGC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..::.................x...............:. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -55036263 -39194139 +3225 chr4 + 190214555 20211788 20211787 20211822 35 CTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 12601304 12601303 12601338 12601304 12601303 12601338 35 CTCTCTCTCTCTCTCTCTCACACACGCACACACAC .........................:......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 7610484 NA +3339 chr4 + 190214555 20224918 20224917 20224984 67 AGTGGCACACGCCTATGGTTCCAGCTACTTGGCAGGCTGAGGTGGGAAAATCACTTGAACCCGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....::....--.:.:..............:x........x:xx.x:..x...........:.:.. 11M2D54M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% -55808282 -38422120 +3065 chr4 + 190214555 20276580 20276579 20276644 65 GTGTTAAAAACAAAACAAACAAACAAACAAAAACTTAAAAG---AGAAATAAGTAAATCTGGAAACAG chr4 + 94230402 28037172 28037171 28037239 28037172 28037171 28037239 68 GCATTAAAAACAAAACAAACAAACAAACAAAAATCCACAAGCAAAGAGATAGTGTAATCAGTGGGCAG .::..............................:::.x...---...:...:xxx....x.x:::... 41M3I24M 49/65 75.4% 68/94230402 0.0% 3/65 4.6% -7760592 -86469810 +3041 chr4 + 190214555 20280204 20280203 20280275 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...xx:.x......::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -55753002 -38477400 +3637 chr4 + 190214555 20280279 20280278 20280400 122 GCCGAGACCGCATCACTGCACTCCAGCCTGGGTGACA-------GAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAACAACAACAAAAAAAAACCAAAAAGCTTTCACTAGTTACATTCCTAG chr4 + 94230402 66947677 66947676 66947804 66947677 66947676 66947804 128 GCTGAGTCTGTCTCTCCTTATTCTAGA-TGAGTGACATATGCAAGAATAAGTCTTTGTCCCCTATAAAAAACAAACAAGCCAACAGCAACAACAAAAAACCCTTAAACTTTCACAGCATAAATTCTTAG ..:...x.:.:x..x.:x:.:..:..x-..:......-------..:::..x..:....:.xx.x......x...x..:xx....:......x........xxx..:.......x:xx..x....:... 27M1D9M7I85M 82/121 67.8% 128/94230402 0.0% 8/121 6.6% -46667398 -47563004 +3022 chr4 + 190214555 20291465 20291464 20291524 60 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 34623076 34623075 34623135 34623076 34623075 34623135 60 TATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGATTTTTCCTTTTA .........xx......:......:.:....:.......:.x.:xxxx.....::..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -14331611 -79898791 +3017 chr4 + 190214555 20291472 20291471 20291510 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -4501154 -89729248 +3139 chr4 + 190214555 20307081 20307080 20307143 63 CCCTCCACCCGCTCTATTTCTTTCCCTCCCTCCCTCCCTTCCCTTCCCTCCCTTCCTCCCTCC chr4 + 94230402 25163656 25163655 25163718 25163656 25163655 25163718 63 CCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ...:x.x.......:x...::.....x:..x:...:.:...::...:....:.:....:.:.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -4856575 -89373827 +3066 chr4 + 190214555 20307118 20307117 20307172 55 CTTCCCTTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCT chr4 + 94230402 41536906 41536905 41536960 41536906 41536905 41536960 55 CTGCATTTCTCCCTCTTGCTCCTCCCCTCCCCCCCACCCCCCCTTTTTCTTTCCT ..x.x:...:.:.:...x....::.......:...x...:....::...:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -21229788 -73000614 +3406 chr4 + 190214555 20334791 20334790 20334878 88 AAATCAATTAAAATTCTAGAAGCCTCAGTTTCCTCATGTGTAAAATTAGGATGATAAAACCTCATAGAATAGAAAGGTAATGCATGTG chr4 + 94230402 92212711 92212710 92212794 92212711 92212710 92212794 84 AAATCAGTCTCGACTCTTTGTGCCTCAGTTTCCCCAGGTGCAGGATAAGGATGATAAAACCT----GCATGGAGGGATGCTGCAAATG ......:.:xx:.:...xx:x............:..x...:.::..x...............----.x..:..::.:.:x....x:.. 62M4D22M 59/84 70.2% 84/94230402 0.0% 4/84 4.8% -71877920 -22352482 +3095 chr4 + 190214555 20345477 20345476 20345551 75 TGGAATACTTATTTCTTTTTTTTTTCCTTTTTTCTTTTTCTTTTTCTTTTTTCCTTTTTTCTTTTTTCTTTTTTT chr4 + 94230402 59835390 59835389 59835464 59835390 59835389 59835464 75 TAGAATAATTAGCTGCATTTTTTTTTCTTGTTTCAAACTTCTTACTTTATTTCTTGTTTTCTCTTTTCTCTTTTT .:.....x...x:.x:x........:...x....xxx:.::..x::..x....:.x......:......:..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -39489913 -54740489 +3244 chr4 + 190214555 20352773 20352772 20352842 70 CATGGTGGCATGCACCTATAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x.:....:.........:.::........x:xx.x...x.:........::.:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -55680424 -38549978 +3091 chr4 + 190214555 20354982 20354981 20355048 67 CTTTCTTTTTCTGTTTCTTTTT----TACCTTTCCTCATTTTTAAGTTATTGCTTAAAATGATTTGAAATA chr4 + 94230402 88145826 88145825 88145896 88145826 88145825 88145896 71 CTTTCTTTGTTTGTTTCTTTTTCTTTTCTTTTTCCAGCTCTTTAAGTTCTTGCTTCAAATGAATTGTATTA ........x.:...........----.x::.....xxx.:........x......x......x...x.x.. 22M4I45M 53/67 79.1% 71/94230402 0.0% 4/67 6.0% -67790844 -26439558 +3091 chr4 + 190214555 20354982 20354981 20355048 67 CTTTCTTTTTCTGTTTCTTTTT----TACCTTTCCTCATTTTTAAGTTATTGCTTAAAATGATTTGAAATA chr4 + 94230402 88142155 88142154 88142225 88142155 88142154 88142225 71 CTTTCTTTGTTTGTTTCTTTTTCTTTTCTTTTTCCAGCTCTTTAAGTTCTTGCTTCAAATGAATTGTATTA ........x.:...........----.x::.....xxx.:........x......x......x...x.x.. 22M4I45M 53/67 79.1% 71/94230402 0.0% 4/67 6.0% -67787173 -26443229 +3128 chr4 + 190214555 20368342 20368341 20368407 66 TTAAAAAAAAAGATTAACAGAAAACAAAACAAAACAAAAAAAAGAGAAAGTTCTC----AGTAGCCCTCT chr4 + 94230402 71156599 71156598 71156667 71156599 71156598 71156667 69 TTAAAAAAACAAACAAACAAAACACAAAACAAAACAGAAAAAAGA-ACAGTTTTCCCAGAATAGCTCCTT .........x.:.:x....:..x.............:........-.x....:..----.:....:.::. 45M1D9M4I11M 52/65 80.0% 69/94230402 0.0% 5/65 7.7% -50788257 -43442145 +3029 chr4 + 190214555 20376108 20376107 20376166 59 TGTTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTACAAATCTCTTTAGTGTCTGGCTTC chr4 + 94230402 42946266 42946265 42946324 42946266 42946265 42946324 59 TGTTTGACTTTTTGATCTTTTTTTTTTTTTTTTTACCAGCCATTTTAGCCGCTTGGTTC .....:.......xx.:...................x.::.x:.....:xx..x.x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -22570158 -71660244 +3591 chr4 + 190214555 20388796 20388795 20388893 98 TATATATATATAACATATGTAAAATATATATAATATATAATATATATAAAATATGTATTATATATAAAATATAATAT-----ATAATATATATAAAACATAAT chr4 + 94230402 26320246 26320245 26320348 26320246 26320245 26320348 103 TAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ..x..x...x.x....:.:..x.x..:....x.......x......:..x....x......:...xx....xx....-----:..x.:.....:x..:.x.:. 77M5I21M 71/98 72.4% 103/94230402 0.0% 5/98 5.1% -5931450 -88298952 +3331 chr4 + 190214555 20388807 20388806 20388903 97 AACATATGTAAAATATATATAATATATAATATATATAAAATATGTATTATATATAAAATATAATATATAATATATATAAAACATAATATATATAATA chr4 + 94230402 26320248 26320247 26320344 26320248 26320247 26320344 97 AATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:x...x.x.x..:......x..:...x........xx....::.x.....x..xx..:..x:xx...:.....x.xx.::..x:.....:..... 97M 66/97 68.0% 97/94230402 0.0% 0/97 0.0% -5931441 -88298961 +3112 chr4 + 190214555 20396832 20396831 20396895 64 ATTTAAATATATACATCTAAAGATATACATATTAAATATACACACCTAATATATAAATACATAA chr4 + 94230402 54842286 54842285 54842344 54842286 54842285 54842344 59 ATCCAGATATA-----CTACAGGTATATACACTAAATATACACACATAGTGTATAGATATATAA ..::.:.....-----...x..:....:.:.:.............x..:.:....:...:.... 11M5D48M 46/59 78.0% 59/94230402 0.0% 5/59 8.5% -34445454 -59784948 +3023 chr4 + 190214555 20417414 20417413 20417481 68 AATCATATATATATGTGTGTGTGTATATATATATATATATATATACGTATATATATGTGTGTGTACAT chr4 + 94230402 29870211 29870210 29870278 29870211 29870210 29870278 68 AATAGTTTATATATGTGTGTGTGTATATATATGGACTGCTATGAACACATATTAATTTTTTTGTACAT ...x:.x.........................:x.:xxx...:x..::....xx..x.x.x....... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -9452797 -84777605 +3023 chr4 + 190214555 20417454 20417453 20417517 64 ATATACGTATATATATGTGTGTGTACATATACGTATATATACATATACATATATAGATATGTGT chr4 + 94230402 46063299 46063298 46063362 46063299 46063298 46063362 64 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATAT ...:.:..:..:..:...:..x.:....:.x.:.:...:.x:............:.xx..:.:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -25645845 -68584557 +3294 chr4 + 190214555 20431337 20431336 20431419 83 AGGAGGTAACAGTGTGCCTCTATATTTAAAGTAAATATTTGTGTTTTATTTTTATTTTTATTTTTATTTTTTTTAAAGACAGA chr4 + 94230402 80035021 80035020 80035103 80035021 80035020 80035103 83 AAGTGGGATCCATATTCTCCTGCATTTACTGGAAATATTTGCTTTGTATTATTGTTTTTATTTTTATTTTTGTAAACAAAAGA .:.x..x.x.x:.:.x.::..::.....xx.x.........:x..x....x..:.................x.x..x:.x... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% -59603684 -34626718 +3078 chr4 + 190214555 20437775 20437774 20437844 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATGGCGTGAACCCAAGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:...........::...:....x.xx.x...xx:.x........::.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -55595422 -38634980 +3459 chr4 + 190214555 20463445 20463444 20463585 141 TGTGATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGCGTATATCCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTAT--ATCTCACATCTCTCCAACTAG--ATTTAAAAAA chr4 + 94230402 89812963 89812962 89813091 89812963 89812962 89813091 129 TGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACAT--------GTGCAAACTCCCAT--------GCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTAAGAAA ....::.....x...x....:.:.....x..x..::x.xx...:..--------....:x.:x:....--------.:..:...x:x.............:.......x.--......x:.:.:.x::.x:..--..x...:... 46M8D14M8D34M2I21M2I10M 88/125 70.4% 129/94230402 0.0% 20/125 16.0% -69349518 -24880884 +3188 chr4 + 190214555 20463448 20463447 20463523 76 GATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGCGTATATCCATATATGTGTGTG chr4 + 94230402 22600197 22600196 22600272 22600197 22600196 22600272 76 GACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ..:.:.:....x:.:..::.x.:.:..::...:.x.x....:...:.x......:......x...::.:..:x... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -2136749 -92093653 +3584 chr4 + 190214555 20489644 20489643 20489713 70 CATGGTGGTGCATGCCTGTAATTCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--....:...:.........::........x.xx.x...x........:.::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -55543553 -38686849 +3195 chr4 + 190214555 20498042 20498041 20498115 74 GCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGCAGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::.x......:...........::........x.xx.x...x::........::.:..x:xx:...x.:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -55535162 -38695240 +3143 chr4 + 190214555 20518228 20518227 20518270 43 TATGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTT chr4 + 94230402 23522770 23522769 23522812 23522770 23522769 23522812 43 TACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTT ..:...........................::....::.x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -3004542 -91225860 +3025 chr4 + 190214555 20518554 20518553 20518605 52 TATGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792614 24792613 24792664 24792614 24792613 24792664 51 TACTTATGTA-AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ..:x...:..-.x...................x:........x......... 10M1D41M 44/51 86.3% 51/94230402 0.0% 1/51 2.0% -4274060 -89956342 +3062 chr4 + 190214555 20518554 20518553 20518612 59 TATGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:...:.:.:.:.......:.:........x.xx....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -12732449 -81497953 +3204 chr4 + 190214555 20518554 20518553 20518628 75 TATGTATATATATATATATATATATATATATATATTTT--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG chr4 + 94230402 7823264 7823263 7823340 7823264 7823263 7823340 77 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ..::..:.........:.:......x.:.:x.x..:..--xx..:...x..:..............x:.....:::. 38M2I37M 54/75 72.0% 77/94230402 0.0% 2/75 2.7% 12695290 NA +3504 chr4 + 190214555 20536418 20536417 20536500 83 CATAGTGGCAGGCACTTGTAATCCCAGCTACTTGGGAGGCTGAGACAGAAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x....:.:...........::........x.xx:x...x::.........:.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -55496779 -38733623 +3770 chr4 + 190214555 20583669 20583668 20583769 101 CATGGTGGTGCGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGACAGGAGAATCGTTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::.......--..x......:.........x.::........x.xx.x...x.::..........:..x:xx:..:..:..------..x..x...... 11M2D70M6D12M 69/93 74.2% 93/94230402 0.0% 8/93 8.6% -55449528 -38780874 +3135 chr4 + 190214555 20589497 20589496 20589574 78 TTGTGGCTTTTGTTTTGGGTTTTTTGCTTTGTTTTGTTTTAAATCACAAGCTGCCCTAACCTCTAAGACCCATGACAA chr4 + 94230402 13244826 13244825 13244902 13244826 13244825 13244902 77 TTGTGGGTTTTTTTGTGTGTTTTTTGTTTTGTTTTGTTTGAAATCA-ATCCAGTTTTAATATCAAATCTTCATGAAAA ......x....x..x..x........:............x......-.xx.x.:::...:x..x..xx::.....x.. 46M1D31M 57/77 74.0% 77/94230402 0.0% 1/77 1.3% 7344671 NA +3485 chr4 + 190214555 20593952 20593951 20594037 86 ATACATATGTGTGTATGTATATGTATATACACATGTACATACATATACACACACATACATATGTATGTGTGTATATATGTGTATAT chr4 + 94230402 89812975 89812974 89813060 89812975 89812974 89813060 86 ATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ...x........:...x..x...:x.xx.:......:..x..x:x:.::.::.::.x.x.:...:...............x..x.. 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% -69219023 -25011379 +3206 chr4 + 190214555 20593970 20593969 20594076 107 ATATGTATATACACATGTACATACATATACACACACATACATATGTATGTGTGTATATATGTGTATATATGTACATATGTACATATTCTGCAAAGCCTGAATTCTGC chr4 + 94230402 22600198 22600197 22600293 22600198 22600197 22600293 96 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATG------CATGCACGTAAGTG---ATAGTGAAAATCCTGA--TCTGC .:.:::....x......:.x.:....::.:...x.x...::...:.x.......:......------:...:..:..x..:---..xx..x...x.....--..... 61M6D14M3D16M2D5M 69/96 71.9% 96/94230402 0.0% 11/96 11.5% -2006228 -92224174 +3339 chr4 + 190214555 20594132 20594131 20594192 61 TATACATATATACACACATACATATGTATGTGTGTATATATGTATGTACATGTGTGTATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:.x.x.:...:..:.......:....:...:...:...x:x:......:.....:..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -35100316 -59130086 +3283 chr4 + 190214555 20594150 20594149 20594285 136 TACATATGTATGTGTGTATATATGTATGTACATGTGTGTATATACATATGTATGTATGTGTGTATATATGTA----------TATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-------GTTTCTGTGGGTGTACA .:.x...::........x.x.:..x::...:x.:.:....:x:......::x:..:.::x.:..::......----------.:.....:.:::.:..x....:...::...::x:xx....-------..x.x....x:....:. 72M10I40M7D17M 80/129 62.0% 139/94230402 0.0% 17/129 13.2% -515040 -93715362 +3705 chr4 + 190214555 20594156 20594155 20594304 149 TGTATGTGTGTATATATGTATGTA-CATGTGTGTATATACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATATATATATAT chr4 + 94230402 89812913 89812912 89813060 89812913 89812912 89813060 148 TGTGTGT-TGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ...:...-....:.:.x.:...x.-...xxx.xx:.x..:..:.xx:...x....-.:.....x:..x..:.:....:..x.:x..::x:xx......:.:..x..x.x...::......x:x.:...:.:.....:.....:.x..x.. 7M1D16M1I30M1D94M 95/147 64.6% 148/94230402 0.0% 3/147 2.0% -69218757 -25011645 +3865 chr4 + 190214555 20594161 20594160 20594296 136 GTGTGTATATATGTAT-------GTACATGTGTGTATATACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATAT chr4 + 94230402 5214181 5214180 5214321 5214181 5214180 5214321 141 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGC--GCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .....x....:x.:.:-------..:..x.....:x:..:x::.:.:..x::......:::.x:...x.::::.:::.:x.::..:...:...x.:...:.:::.:.--...x.:..:......:...:.x.......:.:.. 16M7I84M2D34M 81/134 60.4% 141/94230402 0.0% 9/134 6.7% 15379980 NA +3480 chr4 + 190214555 20594174 20594173 20594285 112 TATGTACATGTGTGTATATACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATA chr4 + 94230402 85834533 85834532 85834644 85834533 85834532 85834644 112 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACA ...x:.:x.....x.:.:.:::.:...:.....xx:....x::..::.......x:.......x...::...:.....:.:.::xx.xx.x:x..x.x:x.x........:. 112M 69/112 61.6% 112/94230402 0.0% 0/112 0.0% -65240359 -28990043 +3221 chr4 + 190214555 20594186 20594185 20594315 130 TGTATATACATATGTATGTATGT----GTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATATATATATA-----TGTGTGTGTATA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:x.......:...:.x.x...----..:.x........:x:::..:...x:.....:x..:.::..::..:x...:.x:x::.:.:.......:.:x:...:::..:::.::x:xx..:.-----....x.....:. 23M4I95M5I12M 78/130 60.0% 139/94230402 0.0% 9/130 6.9% -515004 -93715398 +3259 chr4 + 190214555 20594190 20594189 20594258 69 TATACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:..x......:...x...x...x.:.............:..x.::xx.x:...x.....:..::.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -49499952 -44730450 +3895 chr4 + 190214555 20594192 20594191 20594295 104 TACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGT--ATATACATATACATATACATACACGC--ATATGTATGTGTGTATGTATATGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:.:....:...x.x....x:::...x........:x:....:.::--:.:...x.....:...::.:x..:..--x.:.....:........x.....::..:.:. 47M2I26M2I31M 71/104 68.3% 108/94230402 0.0% 4/104 3.8% -515002 -93715400 +3235 chr4 + 190214555 20594198 20594197 20594303 106 TGTATGTATGTGTGTAT---ATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATATATATATA chr4 + 94230402 89812949 89812948 89813057 89812949 89812948 89813057 109 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA .:.....xx....x.:.---....:x...x:.....::..:.x..x..:.x.xx.:.:..::::.x..x.x:...::.:...x:x...:.:.............:.x.. 17M3I89M 68/106 64.2% 109/94230402 0.0% 3/106 2.8% -69218751 -25011651 +4261 chr4 + 190214555 20594198 20594197 20594314 117 TGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATATATATATATGTGTGTGTAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.x..:..:x::.:x::.:.:..x:..:...:.:::x..:.x.:..:.:....x...:.::.:....x..:........::.:.x.:......:.::..::.x.......:::.. 117M 70/117 59.8% 117/94230402 0.0% 0/117 0.0% 15379993 NA +3409 chr4 + 190214555 20612237 20612236 20612331 95 TATCTCAAGAAAAAAAAAAAAAAAAAGAATACAGGA-----------TGAGACTGTTTAAGTCAGAACATTCCCCCGCCCCCCGCCAAAAAAAAAAAAGAGGAAAA chr4 + 94230402 71419123 71419122 71419228 71419123 71419122 71419228 106 TACTTTAAGCCAAAAAAAAAAAAAAGGCACAAAACAACAGCACTTCTTAAAACTGCCAAAAAACAAACATCCCCCCCCCCCCCCCCAAAAAAAAACAAAAAACAAA ..::.:...xx..............:.x.:.x.:x.-----------.:.:....::x..:xxx:.....:.....x......x...........x..:.::x... 36M11I59M 66/95 69.5% 106/94230402 0.0% 11/95 11.6% -50806886 -43423516 +3478 chr4 + 190214555 20612242 20612241 20612332 91 CAAGAAAAAAAAAAAAAAAAAGAATACAGGA-----TGAGACTGTTTAAGTCAGAACATTCCCCCGCCCCCCGCCAAAAAAAAAAAAGAGGAAAAA chr4 + 94230402 71423228 71423227 71423323 71423228 71423227 71423323 96 CAAGGAAAAAAAAAGGCACAAAACAACAGCACTTCTTAAAACTGCCAAAAAACAAACATCCCCCCCCCCCCCCCCAAAAAAAAAACAAAAAACAAA ....:.........::x.x..:.xx....x.-----.:.:....::x..:xxx:.....:.....x......x............x.:.::.x... 31M5I60M 64/91 70.3% 96/94230402 0.0% 5/91 5.5% -50810986 -43419416 +3885 chr4 + 190214555 20679098 20679097 20679182 85 GATGCAGTGGGGTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATTGCCTGAACTTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033193 76033192 76033277 76033193 76033192 76033277 85 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..xx.x.......x......:...........::........x.:x.x...x::.:.....:::.:..x.xx:..:..:.. 85M 59/85 69.4% 85/94230402 0.0% 0/85 0.0% -55354095 -38876307 +3190 chr4 + 190214555 20693520 20693519 20693558 39 GCCTCAAAAACAAACAAACAACAACAGCAACAAAAAAAC chr4 + 94230402 22215894 22215893 22215932 22215894 22215893 22215932 39 GCATTAAAAACAAACAAACAACAACAACAACAAAAAAAC ..x.:.....................:............ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -1522374 -92708028 +3429 chr4 + 190214555 20693524 20693523 20693567 44 CAAAAACAAACAAACAACAACAGCAACAAAAAAACCAAGATCAT chr4 + 94230402 39912623 39912622 39912666 39912623 39912622 39912666 44 CAAAAACAAACAAACAACAACAACAACAAAAAAGACAACATCAT ......................:..........:x...x..... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% -19219099 -75011303 +3675 chr4 + 190214555 20735294 20735293 20735379 86 ACTTAACATCCCTTTGCCTCAATTTTCGTATCTGTAAAATGGAGCTAATAATAG-TATCTACCTCTTCACAATTTTATGAGGATTAA chr4 + 94230402 83501156 83501155 83501242 83501156 83501155 83501242 87 ACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAA .......x.x:x.x.......:.....x:.:...............:...:..:-..:.......x:x:x::.x..:.....x.x.. 54M1I32M 62/86 72.1% 87/94230402 0.0% 1/86 1.2% -62765862 -31464540 +3112 chr4 + 190214555 20748857 20748856 20748927 71 TCATATGAATTACGTGTGTGTGTGTATGTGTGTGTGTGTATATATATATATATATATATATGAAATACATA chr4 + 94230402 65759974 65759973 65760044 65759974 65759973 65760044 71 TCATATCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTA ......xx.:.x::x:.x....x......:........:...:..:.x.:.:....:.....x.x...x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -45011117 -49219285 +3033 chr4 + 190214555 20772606 20772605 20772654 49 TTTATTATACATTTTGTTCCCTTTCTCTCTCTCTTTCTTTCTTCTTTTT chr4 + 94230402 56778492 56778491 56778540 56778492 56778491 56778540 49 TTTATCACTTATTTTGTTCTTTTTCTGTACCTCTTTCTTTTTTCTTTTT .....:.:x:.........::.....x.x:..........:........ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -36005886 -58224516 +3335 chr4 + 190214555 20792245 20792244 20792304 60 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ....x....:.:...........::........x.xx.x...x::.........:.::.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -55240961 -38989441 +3244 chr4 + 190214555 20792368 20792367 20792413 46 AAAACAAAAACAAAACAAAACCCAAAGCAAACAACAACAACAAAAA chr4 + 94230402 67098141 67098140 67098186 67098141 67098140 67098186 46 AAAACAAAAACAAAATGGAAGCCAAACCAAACAACAACAAGAAAAA ...............:::..x.....x.............x..... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -46305773 -47924629 +3090 chr4 + 190214555 20805187 20805186 20805246 60 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAGGCAGGGTCTTTCTGTGTTGCTCAG chr4 + 94230402 57916775 57916774 57916834 57916775 57916774 57916834 60 TCTATTGCTTTTTTTTTTTCTTTTTTTTTTAAATAGAGATGCTCTTCCTATGCTGCCAAG .:.x..x:...........:.............x..:x.x.x....:..:..:...:x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -37111588 -57118814 +3117 chr4 + 190214555 20863929 20863928 20863988 60 CATGAGTGTATATGTATATATATACACACACACATACATATACATATATACATATGTATA chr4 + 94230402 61270774 61270773 61270833 61270774 61270773 61270833 60 CATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACA .....:.:...x.........:..:.:..:...:....:.x...:x:..::...x...:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -40406845 -53823557 +3782 chr4 + 190214555 20863995 20863994 20864100 106 TATACGTACATGTAAATGTGTGTATGTATACATACATATGTATGTATACGCATGTATGTATACACATGTATGTATAC------GTATGTATGTATGTATATGCATGTATACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTC--TCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .....:.:::...x--.x....x::....x:...::..:x:.::.....x.:....:x.....::.....:x:..:.------....:.:......x.........:.:... 14M2D61M6I29M 71/104 68.3% 110/94230402 0.0% 8/104 7.7% -245199 -93985203 +3466 chr4 + 190214555 20904308 20904307 20904384 77 TATATATATGTATGTGTGTGTGTGTATATATATATATATATACAGATATATAGATATATATTTGAAACCCTAGGAAA chr4 + 94230402 70094144 70094143 70094219 70094144 70094143 70094219 76 TAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGC-ACATTCTAGAAAA ..x....:...:.x...x...x.....:.....:......x....x.x:...:........x:-.x.::....:... 63M1D13M 57/76 75.0% 76/94230402 0.0% 1/76 1.3% -49189836 -45040566 +3144 chr4 + 190214555 20904309 20904308 20904358 50 ATATATATGTATGTGTGTGTGTGTATATATATATATATATACAGATATAT chr4 + 94230402 29797141 29797140 29797190 29797141 29797140 29797190 50 ATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAAT ...:...:.....:......:...:..x.........:.:.....x.x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -8892832 -85337570 +3528 chr4 + 190214555 20956976 20956975 20957062 87 TTTGATTAGTAGTGTTACAATT--TTTAAAGAAAGAAAGAACATTAAAGAGAAGGAAGACAAGGAAAAAGAAAGAATAGAAAAAGAAAA chr4 + 94230402 32212376 32212375 32212464 32212376 32212375 32212464 89 TCTGACCAGAAATGTCGGGATCGGTTTGGGGAGGGAGACAATACCTGAAAGAAGTATGACAAGGAAAAAGAAAGCATAAAAAAAAAAAA .:...::..x.:...::x:..:--...:::..::..:.x..:.::x:.:.....x.x.................x...:.....:.... 22M2I65M 59/87 67.8% 89/94230402 0.0% 2/87 2.3% -11255400 -82975002 +3019 chr4 + 190214555 20961323 20961322 20961387 65 CTTTATCCAGCCACCATCCTAATGTTCTATCACAGATCATGCCTCTGTGCAAAAAGGCCTGATTT chr4 + 94230402 51252026 51252025 51252090 51252026 51252025 51252090 65 CTTCAACCATCCACCAGCCTCATGTCCTCTGACAGCTTCCACTTTTGTGCAGAAATGCCCGACTT ...:.x...x......x...x....:..x.x....x.:x::.:.:......:...x...:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -30290703 -63939699 +3236 chr4 + 190214555 20999411 20999410 20999458 48 GGTGTTTTTTTTTTTTGTTTGTTTTTTGTTTTTTTTTTTTTTTTTTAT chr4 + 94230402 53858851 53858850 53858898 53858851 53858850 53858898 48 GGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTTTTGCCTCAT .....x......x...........x................x::.:.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -32859440 -61370962 +3118 chr4 + 190214555 21008416 21008415 21008477 62 TGCTATAAAATCTTTATTAAAAATACAATTATTTACAAAATTATTAATACTTATGGATTAGA chr4 + 94230402 44838803 44838802 44838864 44838803 44838802 44838864 62 TACTGTAAAATCTTCGTTAAAAAAAAAAATAGCAACAAAATCATTAAAACTTATATATCGGA .:..:.........::.......x.x..x..x:x.......:.....x......:x..::.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -23830387 -70400015 +3944 chr4 + 190214555 21015826 21015825 21015928 103 ATATATACAATATATACAATATATAAAATATATACAATATATAAAAATATATAAATATATACAATATATACAATATAATATGTTTAATATATAAATATATATA chr4 + 94230402 85168912 85168911 85169013 85168912 85168911 85169013 102 ATATATA-AATATACATACCGTATAAAATATATACAGTATATGGTAATATATAAACATGCACACTGTCCTGATGTTAGTATGCCTTTCATATACATAAACACA .......-......:.:.x::...............:.....::x..........:..::...x.:.x:xx.xxx..:....::.xx:.....x...x.:.:. 7M1D95M 71/102 69.6% 102/94230402 0.0% 1/102 1.0% -64153086 -30077316 +3046 chr4 + 190214555 21025454 21025453 21025503 50 TGCATGTAGTGAAAACAACTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 + 94230402 49233514 49233513 49233563 49233514 49233513 49233563 50 TGTATGAGAAAAAAACAGCTGAGGAGGAAAGAGAGAGAGAGAAAGAGAGA ..:...x::x:......:.....:::..:.............:....... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -28208060 -66022342 +3172 chr4 + 190214555 21025475 21025474 21025570 96 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTGCAAAAAGGTCACTCATTGATACTGTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 87432422 87432421 87432517 87432422 87432421 87432517 96 AGAGAGGAAAATAAATAGAAAGAGAGGGAGAGAGAGCGCTGCCTGCATGCCAACCATCCGATTTCTCTTTTATTTTATTTTGTTTTTTTTCCCTTT ......::.:.x.:.x...:......:.........x.xx:x.....x:xx:::..::.:x.xx:x..x..x....x....x........:::... 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% -66406947 -27823455 +3572 chr4 + 190214555 21025479 21025478 21025594 116 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTGCAAAAAGGTCACTCATT--GATACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTTGC chr4 + 94230402 87432422 87432421 87432539 87432422 87432421 87432539 118 AGAGAGGAAAATAAATAGAAAGAGAGGGAGAGAGAGCGCTGCCTGCATGCCAACCATCCGATTTCTCTTTTATTTTATTTTGTTTTTTTTCCCTTTACACGCACGGCCCCGCGGTTGC ......::.:.x.:.x...:......:.........x:....xx:x.x.:..x:...:--:x.x..x....x....x....x........:::..x.x...x.xxx:.x.x.x..... 58M2I58M 77/116 66.4% 118/94230402 0.0% 2/116 1.7% -66406943 -27823459 +3101 chr4 + 190214555 21039221 21039220 21039292 72 ACATGGTGGTGTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGGAAC chr4 + 94230402 76033196 76033195 76033265 76033196 76033195 76033265 70 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...::......--...x....:.:.........::::........x.xx.x...x::........x:.:.:. 11M2D59M 50/70 71.4% 70/94230402 0.0% 2/70 2.9% -54993975 -39236427 +3110 chr4 + 190214555 21053009 21053008 21053057 49 ATACACACACACACACATACACACACACACATATATATATATATAAATA chr4 + 94230402 74526074 74526073 74526122 74526074 74526073 74526122 49 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA ..x...............:x...:.....x.......::......x:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -53473065 -40757337 +3520 chr4 + 190214555 21086894 21086893 21087006 113 CTTCTTTCTCCCTCTCTTTCCCTCTTTCCCTTTCCTTCTTTCTTTCTTTCTCCCTCCCTCCCTTCCTTTTCCTTCCT--CTCTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTGAG chr4 + 94230402 31718985 31718984 31719099 31718985 31718984 31719099 115 CTGCTCTCTCTTTCAAGTTGCTGTCAGCCTTACCCTTCTGTCTTTCCTTCTGCCTTCCTCTTCATTTTTTGCTGACTGCTGCCCTCTGTCTTCCTTTTTTTTCTTTATCTTTTAG ..x..:....::..xxx..x.:x::xx..:.x:......x......:....x...:....:::x::....x..xx..--:x.:....x....:....:....:...x.:...x.. 77M2I36M 73/113 64.6% 115/94230402 0.0% 2/113 1.8% -10632091 -83598311 +3354 chr4 + 190214555 21086948 21086947 21087021 74 TCCCTCCCTTCCTTTTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTGAGTCTTGCTCTGTCACC chr4 + 94230402 56907959 56907958 56908031 56907959 56907958 56908031 73 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTT-TTCTTTCACC ...x:..:.....::...x..:...........:...:...:....:.....xx:x::.x...-:...x..... 63M1D10M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% -35821011 -58409391 +3058 chr4 + 190214555 21123085 21123084 21123143 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x......::.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -54910121 -39320281 +3114 chr4 + 190214555 21124024 21124023 21124084 61 TAAAAAAACAAAAAAACAACAAAAAAAAAACAACAAAAAAAACCTATATTTTCTTTAAAAA chr4 + 94230402 61374646 61374645 61374706 61374646 61374645 61374706 61 TAAAAAAACAAACAAACAAAAAAAAAACACCAAAAAAAGTAACTTTCCCTTGTTTTAAAAA ............x......x.......x.x...x....:x...:.x:x:..x:........ 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -40250622 -53979780 +3054 chr4 + 190214555 21132884 21132883 21132973 90 GTGCCTGTAATCCCAGCTACTTGGGACGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAAGTTGCAGTCAGCTGAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.x....:.:...........::.x......x.xx.x...x::...........:..x:xx::.:..:..------:.x...:..... 72M6D12M 57/84 67.9% 84/94230402 0.0% 6/84 7.1% -54900322 -39330080 +3409 chr4 + 190214555 21142020 21142019 21142093 74 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGTGTGAACCCGGGAGGCTGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........:.::........x.xx.x...x.::x.......:.:..x:.x:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -54891184 -39339218 +3314 chr4 + 190214555 21152113 21152112 21152195 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -54881084 -39349318 +3843 chr4 + 190214555 21153442 21153441 21153528 87 TCTGTCCCTCTCTCTCTCTCTCTCTTTATATATATACATATATATGTGTATATTTATATATATAT-------GTGTGTGTGTATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...:..:..x.............x.x.......:.::...:.:.:::.:.:.:..x..x...:..-------..x....:.:..:.:.:..... 65M7I22M 62/87 71.3% 94/94230402 0.0% 7/87 8.0% -39678088 -54552314 +3069 chr4 + 190214555 21153478 21153477 21153533 56 CATATATATGTGTATATTTATATATATATGTGTGTGTGTATATATATATATATATA chr4 + 94230402 21429695 21429694 21429750 21429695 21429694 21429750 56 CATATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACA ......x.:..x.x.x..x:.x...............:...........:..x.:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -276217 -93954185 +3293 chr4 + 190214555 21165410 21165409 21165488 79 AAAAAAAAAAAAAAAAAAAAATCATA-TGTTTGAAAGCATCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATTATACTA chr4 + 94230402 59138915 59138914 59138994 59138915 59138914 59138994 80 AAAAAAAAAAAAGAAAAAAAATCAGAATTGTTATGTGCATAAGAGAGGATAAAAAACAAACAAACAAGAGTATTATGCCA ............:...........x.-.xx..:x:x....x.:.:.::.x......x...x...x....:x.....:.:. 26M1I53M 58/79 73.4% 80/94230402 0.0% 1/79 1.3% -37973505 -56256897 +3118 chr4 + 190214555 21166817 21166816 21166881 65 TAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033213 76033212 76033277 76033213 76033212 76033277 65 TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -54866396 -39364006 +3150 chr4 + 190214555 21166936 21166935 21167009 74 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTGAGTGGATGG-ATGGATGGATAAGCAAACTGTTGTACATTT chr4 + 94230402 6809297 6809296 6809370 6809297 6809296 6809370 74 CTCAAATAAGAAAAAAAAAAAAAAAAGATGAAGTCAGTGAATGGTGTGAGAGGACTGACAAGTT-TTATTCATTT ......x..:................:.x.....x....:....-:..::x...:x::...::.-..:.x..... 44M1I19M1D10M 55/73 75.3% 74/94230402 0.0% 2/73 2.7% 14357639 NA +3142 chr4 + 190214555 21169650 21169649 21169709 60 TACTTTATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTA chr4 + 94230402 65759981 65759980 65760040 65759981 65759980 65760040 60 TACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTA .......x.......x..:...:........::.:::...x.....:.:::.:...x:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -44590331 -49640071 +3075 chr4 + 190214555 21174910 21174909 21174965 56 AAAAAAGAAAAAAAAAGCATTAGTAATATGTTAACTCATATTATTTTCAGCAAGCT chr4 + 94230402 57642106 57642105 57642161 57642106 57642105 57642161 56 AAAAAAGAAAAAAAAAACAGCAGGCCCTTTTTGATTCATATCATTTTTAGCAAGCT ................:..x:..xxx:x.x..:.:......:.....:........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -36467196 -57763206 +3049 chr4 + 190214555 21177667 21177666 21177706 40 TAAAAAACAAACAAACAAAAACAAACAAACAAAAAACAAC chr4 + 94230402 11407781 11407780 11407820 11407781 11407780 11407820 40 TGAAAAACAAACAAACAAAACAAAACAAACAAAAAACAGC .:..................xx................:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 9769886 NA +3420 chr4 + 190214555 21185389 21185388 21185500 112 CCTCCTCCTACTCCCTCTTCCTCTTCTTCCTCTCTGTCCTCTTCCTCTTCTTTTTCTTCCTCCTC-------CCTTTTCTTCTTCTTCTTCCTCCTCCTCCCCCTCCTCTTCTCCTTTT chr4 + 94230402 18131207 18131206 18131324 18131207 18131206 18131324 118 CCTGCTGCCAGCCTCTGTGTTTGGTACTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCA-CTCCCTCCCCAGCCCTCACCTCTTCTCTTTCT ...x..x.:.x:.:..x.x::.xx.x:..:.x:::..::.:.:x:......:..:..x.......-------..:..........x-..:.....:.xx...:.x.........:..:. 65M7I14M1D32M 73/111 65.8% 118/94230402 0.0% 8/111 7.2% 3054182 NA +3098 chr4 + 190214555 21200283 21200282 21200373 91 TGTGTGTGTGTGTGTGTGTATATATATACATACATATATGTGTGTATATATATATACATACATATATGTGTGTATATATATATACATACAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTAT-TA---------ATGTAGGCATACATATGTAAATACA------TGTTTATGCACACATACACACAT .....x.............:.:...-..---------....:x.:...:....:..x.....------...x...::.:.:.....:.... 25M1D2M9D25M6D23M 60/75 80.0% 75/94230402 0.0% 16/75 21.3% -64634258 -29596144 +3242 chr4 + 190214555 21200283 21200282 21200348 66 TGTGTGTGTGTGTGTGTGTATATATATACATACATATATGTGTGTATATATATATACATACATATA chr4 + 94230402 85834543 85834542 85834608 85834543 85834542 85834608 66 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ...x...............:...xx..::.x:....:..:...:x...:..:.x..:::...:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -64634260 -29596142 +3454 chr4 + 190214555 21200285 21200284 21200354 70 TGTGTGTGTGTGTGTGTATATATATACATACATATATGTGTGTATATATATATACATACATATATGTGTG chr4 + 94230402 85834547 85834546 85834616 85834547 85834546 85834616 70 TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...................xx..:..x::.:.:......:x:..:..:.x...:..:.....:.::::.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -64634262 -29596140 +3042 chr4 + 190214555 21200369 21200368 21200429 61 TACATATATGTGTGTATATATATATATACATACATATATGTGTGTATATATATACATTACA chr4 + 94230402 73100554 73100553 73100614 73100554 73100553 73100614 61 TACGTATCTAGTTGTATCTATGTACATGCGCACCTGTGTGTGTGTGTATAAATACATTATA ...:...x.:xx.....x...:..:..:.::..x.:.:.......:....x........:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -51900185 -42330217 +4495 chr4 + 190214555 21206018 21206017 21206199 182 CATTCTTTCTACCACTGACCTGCACTTTGGCAT---TCTCATCCTGTGG-CTTTAATTAAATGTTAACATTCATTTGCCCTTTTCCATTGTGTTAAAGATAACCTTTGCTTCCTGTCGCGTCTAGATAAG----CTTCACTCCATGACAGGTACCAAATAGGTTCATCTTGATATAAAGTAAAGAATGGA chr4 + 94230402 77484590 77484589 77484779 77484590 77484589 77484779 190 CATTTGTTCTGACATTGACCTGTGCTTTGTCTTATTTTTTGTTTTTTGGACTTTAATTACAAGTTAACATTCTTTTGTCCTTCTTTATAATGTTAAAGAATTCACTTAATTCTTAGGGAGATTAGATCAATTGTCTCCATCTATTCACAAGTAAAAACCACACACATCCTCTTATAATCTATTGAACTGA ....:x....:x..:.......::.....x.x.---.:.::.::.x...-.........x.x..........x....:....:.::..x:.........xxx.x:..:x...:.:xx.x.x:.....x.:----..:..:::xx.x...:...xx..x:.x::x....:.xx.....xx..xx...:x.. 33M3I13M1I80M4I56M 117/182 64.3% 190/94230402 0.0% 8/182 4.4% -56278572 -37951830 +3016 chr4 + 190214555 21215796 21215795 21215836 41 TTCTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTTGA chr4 + 94230402 76208475 76208474 76208515 76208475 76208474 76208515 41 TTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTGA ..:...........................x:..x..:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -54992679 -39237723 +3070 chr4 + 190214555 21247786 21247785 21247835 50 ATACACCACAGGTGGATATATATATATATATATATACACACACACACAGA chr4 + 94230402 74671060 74671059 74671109 74671060 74671059 74671109 50 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAA ...:..x.x.:x.:.x.:................:.............:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -53423274 -40807128 +3093 chr4 + 190214555 21247898 21247897 21247966 69 TATATATATATACACACACACACATATATATATACACACATATATATATACACACACATATATATATAC chr4 + 94230402 54963193 54963192 54963261 54963193 54963192 54963261 69 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .:.....x:.....x.::.....x......:.:.......xx:.::.:::.x..:...:.:..x..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -33715295 -60515107 +3001 chr4 + 190214555 21247954 21247953 21248003 50 CATATATATATACACACACATATATATATACACACACACACACACACACA chr4 + 94230402 27759112 27759111 27759161 27759112 27759111 27759161 50 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA .....:...x....x........:.:....::..:::.:....:...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -6511158 -87719244 +3054 chr4 + 190214555 21247964 21247963 21248013 50 TACACACACATATATATATACACACACACACACACACACACCCCCCACAG chr4 + 94230402 4409082 4409081 4409131 4409082 4409081 4409131 50 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAG .::...:.:...................x.x.........::::..x... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 16838882 NA +3103 chr4 + 190214555 21256464 21256463 21256531 68 TGGTGCACACCTGTAGTTCCAGCTACTGGGGAGGCTGAGGTGGGAGGATTGCTGGAGTCCAGGAGCTT chr4 + 94230402 76033202 76033201 76033267 76033202 76033201 76033267 66 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ........:--................x.::........x:xx.x.:.x::..x..::....:..... 9M2D57M 49/66 74.2% 66/94230402 0.0% 2/66 3.0% -54776738 -39453664 +3058 chr4 + 190214555 21284084 21284083 21284142 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -54749122 -39481280 +3466 chr4 + 190214555 21285717 21285716 21285770 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x.............:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -54747494 -39482908 +3162 chr4 + 190214555 21290978 21290977 21291055 78 ATAGAAGAAGTAGAGGCTCAGAAAAGTTAAATAATTTGCCTGAGATCACACAGCTTGTTAGAG-CAGGGATTGTAGTCA chr4 + 94230402 39085471 39085470 39085549 39085471 39085470 39085549 79 ACAGGGGAAGCAGAAGTGCAGAGAGGTTAAAAGTCTCCACTGAGACCACCCAGATTGTCAGAGTCAGGATTTGTATCCA .:..::....:...:.:x....:.:......x:x:.:xx......:...x...x....:....-....:x.....x:.. 63M1I15M 54/78 69.2% 79/94230402 0.0% 1/78 1.3% -17794493 -76435909 +3088 chr4 + 190214555 21291862 21291861 21291943 82 AAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .::...::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -19820316 -74410086 +3219 chr4 + 190214555 21291870 21291869 21291951 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAGAAAAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x...::..:.x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -19820308 -74410094 +3230 chr4 + 190214555 21291877 21291876 21291965 89 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAGAAAAAAGTCTGATGAATAAA chr4 + 94230402 52659762 52659761 52659850 52659762 52659761 52659850 89 AAGTTAGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAA ...xx............xxx.:....:::...x:::xx.x:x:..xx.....................::x.:...xx::..:...... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% -31367885 -62862517 +3389 chr4 + 190214555 21304032 21304031 21304128 97 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAG------AGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGACAGAGGAGAGAGAGGGAGAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAA---AAAGGAAAAGGAGGGACAG ...:...:::..xx.x...............:...:....------...:xx::.:x.::...x:...:.x......:.:.---.:....:.::......x.. 40M6I35M3D19M 65/94 69.1% 100/94230402 0.0% 9/94 9.6% -29844347 -64386055 +3122 chr4 + 190214555 21304042 21304041 21304157 116 AGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGA-GAGAGACAGAGGAGAGAGAGGGAGAGAGAGAGAGAAGGGAAAAGAGACTAGATGG chr4 + 94230402 2055456 2055455 2055571 2055456 2055455 2055571 116 AGGAGGGGAGGGAGAGCAGCGGGGATGCGAAGGCAGACACACGCACAGGAGGAGGAGGAGACAAAATACACATG-GAGAGAAGGAGGGGGGGAGAAAAAAGGGAGGGGGCTGGAAGG ..:::.:...:.....x::x:.:..x:.::..:x...x.x.x:x....:::...:::....-:.:.x...x.x.-......:....:.:.:....:..::.::.:.:.:..:..x.. 61M1I12M1D42M 68/115 59.1% 116/94230402 0.0% 2/115 1.7% 19248586 NA +3689 chr4 + 190214555 21304072 21304071 21304148 77 AGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGACAGA-----------------GGAGAGAGAGGGAGAGAGAGAGAGAAGGGAAAAGAG chr4 + 94230402 51148379 51148378 51148472 51148379 51148378 51148472 94 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAG ...:...:::..xx.................:...:.....-----------------.:.x.x:.....x......:.:.:....:...:... 41M17I36M 59/77 76.6% 94/94230402 0.0% 17/77 22.1% -29844307 -64386095 +3088 chr4 + 190214555 21305300 21305299 21305376 77 ATCTCTTACTAGCTGTGTGACCTTAGGTAAGTTACTTAACATCTCAGTGTCTTAATGTCCTCATCTATGAAGAGAGG chr4 + 94230402 79037100 79037099 79037176 79037100 79037099 79037176 77 ATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGG ..:...x..x......:..........x......:..x.:x.x..x.x..:.:...x:.::..xx...:..:x.x.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -57731800 -36498602 +3862 chr4 + 190214555 21311554 21311553 21311631 78 TGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATCGCTTGAACCCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::.--......:...........::........x.xx.x...x.:...........:..x.xx:..:..:.. 9M2D67M 58/76 76.3% 76/94230402 0.0% 2/76 2.6% -54721648 -39508754 +3188 chr4 + 190214555 21321769 21321768 21321819 51 GGGAGGGAGGGAGAGAGGAAGGAAGGAGGGAGGGAGAAGAGGAGGGAAGGA chr4 + 94230402 10675421 10675420 10675471 10675421 10675420 10675471 51 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAA ....:.:..:....:.....:.........:..::.x..:..:.:....:. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 10646348 NA +5826 chr4 + 190214555 21322029 21322028 21322199 171 GAGGCAGGGGAGGAAGG---AAGGAAGAAAGGAAGGAAAGGAGGGAGGGAGGAAGAAAAGGAGGGAAGGAGAAAAAGAGGAAGGGAAGGAAGAAAGGAAGAAGGAAGGAAGGAGGGAGGGA---------GGGACAGAAGGAAGGAAGGAAGGAAGGAAGGAA--GGAAGGAAGGAAATGAGGGA chr4 + 94230402 1500700 1500699 1500884 1500700 1500699 1500884 185 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaa .:..x..:.:..:....---::.......:x..:..:.......:.:::.:x.:.........::.x:.:.::x:.x.x..:.....x:...:......:.x....::..::.:.:.:.:.---------:.:.x..:.::..:.::..::...:.::.....--....::...:.....::.:. 17M3I101M9I33M2I20M 108/171 63.2% 185/94230402 0.0% 14/171 8.2% 19821329 NA +3060 chr4 + 190214555 21324898 21324897 21324948 51 TATATTTCCATTTTTTATGTTCTTTTCAATTTCTTGCATCAGTGTTTTATG chr4 + 94230402 7502098 7502097 7502148 7502098 7502097 7502148 51 TACATTTCCATTTTTTTTATTCCTTTTCTTTTATTGCATCAGTATTTTCTG ..:.............x.:...:...:xx...x..........:....x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 13822800 NA +3127 chr4 + 190214555 21338253 21338252 21338309 57 AGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAGACTTTGTATTTTTATCCAGAA chr4 + 94230402 37817596 37817595 37817652 37817596 37817595 37817652 57 AGGCTCCTTCTCAAGAAGGAAAAAAAAAACAAACAGGATTTGTTTTTCTAATTAGGA ..:...........:..::..........x...x..:x.....x...:..x::..:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -16479343 -77751059 +3214 chr4 + 190214555 21365354 21365353 21365414 61 GTGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGACATGAGAATCCCTTGAACCTGAAGG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........:x::........x.x..x...x.x........:::.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -54667850 -39562552 +6471 chr4 + 190214555 21370800 21370799 21370904 105 AATATATATATATATATA-TATATA-TATATATA---TATATATATATATATATATACACACACACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 + 94230402 44243195 44243194 44243304 44243195 44243194 44243304 110 aatgtatatatatatataatatataatatatataatgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTAT ...:..............-......-........---.:.:.:.:.:..........:.:.:.:.:.:.....x............................x....... 18M1I6M1I8M3I73M 91/105 86.7% 110/94230402 0.0% 5/105 4.8% -22872395 -71358007 +6187 chr4 + 190214555 21370801 21370800 21370904 104 ATATATATATATA-TATATA-TATATATA-TATATATATATATATATATATATACACACACACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 + 94230402 44243200 44243199 44243306 44243200 44243199 44243306 107 atatatatatataatatataatatatataatgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATAT .............-......-........-.:.:.:.:.:.:............:.:.:.:.:.....x..............::............x.....:... 13M1I6M1I8M1I77M 88/104 84.6% 107/94230402 0.0% 3/104 2.9% -22872399 -71358003 +3003 chr4 + 190214555 21370817 21370816 21370869 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -1876905 -92353497 +4120 chr4 + 190214555 21373192 21373191 21373283 92 GTGCACTTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCTGGGAGTTGAGGGTTGCAGTGAGTTATCATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.:.........::........x.xx.x...x.......:..::.:..:.xx...:..:..------.x...x...... 74M6D12M 65/86 75.6% 86/94230402 0.0% 6/86 7.0% -54660012 -39570390 +3012 chr4 + 190214555 21383494 21383493 21383537 44 AAGACAAAAAAAAAAAAAAAAAAGAGGGTGGAAGAGTTTTAGAA chr4 + 94230402 91398894 91398893 91398937 91398894 91398893 91398937 44 AAGCCAAAAAAAAAAAAAAAAAAGATTGTGGAAGAGATTTGGGA ...x.....................xx.........x...:.:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -70015400 -24215002 +3229 chr4 + 190214555 21424432 21424431 21424514 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGACTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::..:.....x.xx.x...x::.........:.:..x.xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -54608765 -39621637 +3133 chr4 + 190214555 21424600 21424599 21424649 50 AGAGAAAAAGAAAGAAAGAAAGAAAGAGAGAAAGCAAGCTTACTTTTTTT chr4 + 94230402 75160306 75160305 75160355 75160306 75160305 75160355 50 AGAGAAAAAAGAAGAAAGAAAAAAAAATGGAAACCAAGCTAATTTCTTTT .........::..........:...:.x:....x......x.:..:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -53735706 -40494696 +3503 chr4 + 190214555 21499201 21499200 21499291 91 TGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCATTTGAACCCAGGAGACGGAGGTTGCAGTGAGCCAACATCATGTCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:.x....:.:.........::::........x.xx:x...x..:..........:..x:xx:..:..:..------.....x...:.. 73M6D12M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% -54534004 -39696398 +3567 chr4 + 190214555 21501227 21501226 21501266 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -53746822 -40483580 +3353 chr4 + 190214555 21501229 21501228 21501268 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -53746820 -40483582 +3139 chr4 + 190214555 21501231 21501230 21501270 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -53746818 -40483584 +3102 chr4 + 190214555 21501233 21501232 21501268 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 8899929 NA +4571 chr4 + 190214555 21511995 21511994 21512123 129 GGAAGGAAGTAAGGAGTAGGGAAAGAGG-------GAGGAA-GAGAAGGAAGGAG-----GGAAGGAAAAAGAATGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAGGGAGGGAGGGAGGAAAAGAGTGAGGAAAAAAG chr4 + 94230402 32265488 32265487 32265629 32265488 32265487 32265629 142 GGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ..::...x.:.:....:.x...:..::.-------.....:-.x..:..::....-----.......:..x.x.:.x:x::x.........:.....::.:..::::..........:.:.......x.:.:::....x.:. 28M7I6M1I13M5I82M 87/129 67.4% 142/94230402 0.0% 13/129 10.1% -10753493 -83476909 +3182 chr4 + 190214555 21512072 21512071 21512128 57 GGAAAGAAGGAAGGAAGGAGGGAGGGAGGGAGGAAAAGAGTGAGGAAAAAAGGAAGG chr4 + 94230402 24873250 24873249 24873306 24873250 24873249 24873306 57 GGAAAGTAAGGGGGAGTGACAAGGGGGGGGAGGAAAGGAGCGGGGAAAAGAGGGAGG ......x.:.::...:x..x:::...:.........:...:.:......:...:... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -3361178 -90869224 +3732 chr4 + 190214555 21519342 21519341 21519400 59 ATACACACACACACACACACACACACACACACGTATATGTATGTGTATATATACATATG chr4 + 94230402 44243251 44243250 44243309 44243251 44243250 44243309 59 atatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATG ...:.:.:.:.:.....x................:.:...:.....x.:.:..:..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -22723909 -71506493 +3244 chr4 + 190214555 21519357 21519356 21519454 98 CACACACACACACACACGTATATGTATGTGTATATATACATATGTGTGTATATGTATGTGTATATATACACATATGTGTGTATATGTATGTGTATATA chr4 + 94230402 5214223 5214222 5214320 5214223 5214222 5214320 98 CACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ...:..:x.:::::::..:.x:...x..:::.:.:..x:.::...:..:..x..:......:.::::.x..:.:......:..:::x......::.:. 98M 55/98 56.1% 98/94230402 0.0% 0/98 0.0% 16305134 NA +3133 chr4 + 190214555 21519363 21519362 21519428 66 CACACACACACGTATATGTATGTGTATATATACATATGTGTGTATATGTATGTGTATATATACACA chr4 + 94230402 2675293 2675292 2675358 2675293 2675292 2675358 66 CACAGATACACATCTATGCACGTGTATATGTACATTTGCATGCATATGTAAAATGttatagacaca ....x.:....:.x....:.:........:.....x..::..:.......x:xxxx....x..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 18844070 NA +3702 chr4 + 190214555 21519374 21519373 21519486 113 GTATATGTATGTGTATATATACATATGTGTGTATATGTATGTGTATATATACACATATGTGTGTATA----TGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACA chr4 + 94230402 5214204 5214203 5214320 5214204 5214203 5214320 117 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ..::.x..:..:x:..:x::..::..x:....:.::.:.x....x.::.:......x.::......:----..:......:.:::..x.::.......:::..:.x:...:.::... 67M4I46M 68/113 60.2% 117/94230402 0.0% 4/113 3.5% 16305170 NA +4207 chr4 + 190214555 21519391 21519390 21519516 126 TATACATATGTGTGTATATG----TATGTGTATATATACACATATGTGTGTATATGTATGTGTATATACACATA----TGTGTGTATGTGTATGTGTATATACACATATGTGTGTAT-GTGTATGTGTATATACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA .......:.....x.x.:..----...x.:...:..:x.......::x:..:..:x...::....:...x...:----.....:..........x:...::.::..:.:.x.xx..:-..x.x....x:.:.... 20M4I50M4I39M1I17M 87/126 69.0% 135/94230402 0.0% 9/126 7.1% 410197 NA +3711 chr4 + 190214555 21519404 21519403 21519516 113 GTATATGTATGTGTATATATACACATATGTGTGTATATGTATGTGTATATACACATATGTGTGTATG----TGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACA chr4 + 94230402 5214204 5214203 5214320 5214204 5214203 5214320 117 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ..::.x..:..:x:..:x::..:...x:......:::::x:...x.::.:......x.::.......----..:......:.:::..x.::.......:::..:.x:...:.::... 67M4I46M 68/113 60.2% 117/94230402 0.0% 4/113 3.5% 16305200 NA +3939 chr4 + 190214555 21519413 21519412 21519546 134 TGTGTATATATACACATATGTGTGTATATGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATAT------GTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACA chr4 + 94230402 5214182 5214181 5214320 5214182 5214181 5214320 139 TGTGGATATGGGCACAGCAGCA-GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ....x....:x:....xxx.::-..::.x..:..:x:..:x:...::..x:....:..:.:.x....x.::.....:..------..:..:..x..:......:.:::..x.::.......:::..:.x:...:.::... 22M1D56M6I55M 82/133 61.7% 139/94230402 0.0% 7/133 5.3% 16305231 NA +3740 chr4 + 190214555 21519415 21519414 21519546 132 TGTATATATACACATATGTGTGTATATGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATGTGTGTAT---GTGTATGTGTATATACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA .:..:..:.::::x.x....x.::...x...:....:x:...:...:x:.....:x.:..:..:.:..:x..:::x.x.......:...:.:..x....:..:::.:::.x.xx.---..x.x....x:.:.... 115M3I17M 79/132 59.8% 135/94230402 0.0% 3/132 2.3% 410221 NA +3868 chr4 + 190214555 21519445 21519444 21519577 133 TGTGTATATACACATA-------TGTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATATATACACATAT chr4 + 94230402 5214182 5214181 5214321 5214182 5214181 5214321 140 TGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....x....:x:..:.-------..::x..:..:x:...x.:.:::.:x.:.:....:.:.x....x..:::.:.:.:x:.::...:..:..x..:......:.:::..x.::.......:::..:.x..:.:::..:.. 16M7I117M 77/133 57.9% 140/94230402 0.0% 7/133 5.3% 16305263 NA +3905 chr4 + 190214555 21519558 21519557 21519692 135 ATGTGTATATATACACATATGTGTGTGTATGTATGTGTATATATACACATATGTGTGTGTATGTATGTGTATATACACAAA----TGTGTGTGTATGTATGTGTATATATACACGTGTGTGTA---TGTATGTGTATATACA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..x..:x....:.::::.:.x.x....x::....x.:...:..:x.......::x:.....:x...::....:...x..x:----.....:.:.:......x:...::..:...::.x.xx..---.x.x....x:.:.... 81M4I38M3I16M 86/135 63.7% 142/94230402 0.0% 7/135 5.2% 410371 NA +3961 chr4 + 190214555 21519584 21519583 21519735 152 GTATGTATGTGTATATATACACATATGTGTGTGTATGTATGTGTATATACACAAATGTGTGTGTATGTATGTGTATATATACACGTGTGTGTATGTATGTGTATATACACACGTGTGTGTATGTATGTGTATATATACACACGTGTGTATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCA-GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCT----ACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:x.x:....x....:x:....xxx.::-...:.x..:..:x:..:x:...:x..x:......::.:.x....x.::.:....:.x.----.:..:.:..:..x.:..:::.....:.:.x:::.....:.::..:..x.:.....:.:.. 29M1D58M4D60M 88/147 59.9% 147/94230402 0.0% 5/147 3.4% 16305409 NA +3345 chr4 + 190214555 21519593 21519592 21519698 106 TGTATATATACACATATGTGTGTGTATGTATGTGTATATACACAAATGTGTGTGTATGTATGTGTATATATACACGTGTGTGTATGTATGTGTATATACACACGTG chr4 + 94230402 21109194 21109193 21109297 21109194 21109193 21109297 104 TATACATGTGTGTCTCTGTGGGCGTATTTATATG--TACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG .:..:..:.::::x.x....x.:....x...:..--..:x....x..::x:.....:x...::....:..:x..:.:x.x...:.:.........:x.:.::.:.. 34M2D70M 65/104 62.5% 104/94230402 0.0% 2/104 1.9% 410399 NA +3738 chr4 + 190214555 21519613 21519612 21519726 114 TGTGTATGTATGTGTATATACACAAATGTGTGTGTATGTATGTGTATATATACACGTGTGTGTATGTATGTGTATATACACACGTGTGTGTATGTATGTGTATATATACACACG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTC------TGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x...::......:.x.x------....x.:....x...:....:x:.:.:.:::x:.....:x...::....:...x..:.:x.x...:.:.........:x...::..:. 20M6D88M 70/108 64.8% 108/94230402 0.0% 6/108 5.6% 410423 NA +3092 chr4 + 190214555 21519634 21519633 21519705 72 ACAAATGTGTGTGTATGTATGTGTATATATACACGTGTGTGTATGTATGTGTATATACACACGTGTGTGTAT chr4 + 94230402 55694437 55694436 55694508 55694437 55694436 55694508 72 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:...:x:x...x:x.:.:..:...:......:...........:.:.x:x:..::..::....:.:... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -34174803 -60055599 +3222 chr4 + 190214555 21519639 21519638 21519700 62 TGTGTGTGTATGTATGTGTATATATACACGTGTGTGTATGTATGTGTATATACACACGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:...:...x....:...x.:......:.:........:..::.x.:...:..:x:..:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -65114291 -29116111 +3182 chr4 + 190214555 21519775 21519774 21519843 69 ACGTGTGTGTATGTGTGTGTATACACGTGTGTGTATGTGTGTGTATACACACGTGTGTGTATGTGTGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:.x.:...::..:..:x.....:::x...:.::...:.........:...:x...:..:..x...:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -65114148 -29116254 +3161 chr4 + 190214555 21519791 21519790 21519854 64 GTGTATACACGTGTGTGTATGTGTGTGTATACACACGTGTGTGTATGTGTGTGTATATATTTAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..:....:.:.::.....x.:.:::x.:..x....:..:.......x.....x.......:.:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -55189800 -39040602 +3763 chr4 + 190214555 21528698 21528697 21528842 145 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGG--AAGAAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044808 49044660 49044659 49044808 149 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x:....:x.--...x:......::.::.:xx..::..:.........--..:..x.:......:...:...x....x.:::..xx:..:xx:.:.:..:.... 55M2I36M2I54M 88/145 60.7% 149/94230402 0.0% 4/145 2.8% -27515962 -66714440 +3436 chr4 + 190214555 21541031 21541030 21541113 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAATCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:...........::........x:xx.x...x::......:....:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -54492166 -39738236 +3078 chr4 + 190214555 21541158 21541157 21541231 74 GAGACTCCATCACAAAAGAAAACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA-----TGAAAAAATTACAGAGAT chr4 + 94230402 46677653 46677652 46677731 46677653 46677652 46677731 79 GAGTTTCAATTATTAAGTGCAGTAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGAT ...x:..x..:.:x..:x:x.::..............................x:.-----..:..:..xxx:...... 56M5I18M 54/74 73.0% 79/94230402 0.0% 5/74 6.8% -25136495 -69093907 +3130 chr4 + 190214555 21541179 21541178 21541230 52 ACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGAAAAAATTACAGAGA chr4 + 94230402 44890391 44890390 44890442 44890391 44890390 44890442 52 ACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGA ....::.........................::..x:..x.x..:.x.:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -23349212 -70881190 +3075 chr4 + 190214555 21541181 21541180 21541213 33 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300457 75300456 75300489 75300457 75300456 75300489 33 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -53759276 -40471126 +3284 chr4 + 190214555 21544247 21544246 21544284 38 CTTTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248086 75248049 75248048 75248086 38 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACA ...:...................x.............. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -53703802 -40526600 +3239 chr4 + 190214555 21544249 21544248 21544300 52 TTCTCTCTCTCTCTCTCTCTCTCACACACACACACAAACACATACATAAAAA chr4 + 94230402 75248047 75248046 75248098 75248047 75248046 75248098 52 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagaga .:..::.................x............x.....x.x.x.:.:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -53703798 -40526604 +3259 chr4 + 190214555 21544250 21544249 21544300 51 TCTCTCTCTCTCTCTCTCTCTCACACACACACACAAACACATACATAAAAA chr4 + 94230402 75248050 75248049 75248100 75248050 75248049 75248100 51 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagaga .::................................x...x.x.x.x.:.:. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -53703800 -40526602 +3102 chr4 + 190214555 21544253 21544252 21544288 36 CTCTCTCTCTCTCTCTCTCACACACACACACAAACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:......x... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 8942949 NA +3127 chr4 + 190214555 21552014 21552013 21552080 67 GAAAAAACAAGGGAGAGCTTTTTTTAAAAAAAAAAAAAACAAAAAACAACAACAAAAAAAAACCTTT chr4 + 94230402 79667700 79667699 79667766 79667700 79667699 79667766 67 GAAAAAAAAAAGGTGAGCCTGGGGAAAAAAAAAAAAAAAAAACAACCCACAACAAAACAAAAGCCTT .......x..:..x....:.xxxxx..............x..x..x.x.........x....x.:.. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -58115686 -36114716 +3479 chr4 + 190214555 21577502 21577501 21577560 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x:xx.x...x.:...........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -54455704 -39774698 +3251 chr4 + 190214555 21611598 21611597 21611673 76 CAATATCCACTCTATCTCTTCACCTGGTTTAAGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTT chr4 + 94230402 25575985 25575984 25576060 25575985 25575984 25576060 76 CAAAATCCTTCCTGGGCCACTTTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTT ...x....x::..:xx:.x::x:.......xx.....x..........x...x....xx..........x...... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -3964387 -90266015 +3053 chr4 + 190214555 21611627 21611626 21611673 47 TAAGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTT chr4 + 94230402 75652424 75652423 75652470 75652424 75652423 75652470 47 TAAAGTTCTTATGTTTGGATGTTTGTTTGTTTTTGTTTTGTTTTTTT ...:...:..x......xx....................xx...... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -54040797 -40189605 +3002 chr4 + 190214555 21611630 21611629 21611674 45 GGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTT chr4 + 94230402 28946009 28946008 28946053 28946009 28946008 28946053 45 GGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTT ..x.....................x.x:...x.....x....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -7334379 -86896023 +3118 chr4 + 190214555 21618607 21618606 21618655 49 CTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGAGAG chr4 + 94230402 44980311 44980310 44980359 44980311 44980310 44980359 49 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAG .:..:.........:...:x::............:.........:.x.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -23361704 -70868698 +3422 chr4 + 190214555 21711342 21711341 21711414 73 TGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:....:.........::::........x.xx.x...x.:........::.:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -54321863 -39908539 +3348 chr4 + 190214555 21719834 21719833 21719892 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx:x...x..........::.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -54313372 -39917030 +3449 chr4 + 190214555 21719972 21719971 21720075 104 AAAAAAAAGAAGAAGAGGAAGAAGAAAAGA-AAAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAAAAGAAGAAGAAGAAAAAAAAA chr4 + 94230402 14751897 14751896 14752001 14751897 14751896 14752001 105 AAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAA ...:.::x.:.....x.x:.:..x....x.-...:.x..............:.xx.:..:..:::.....x.:.:.:x.:..:x..:.xx...::::.x...... 30M1I74M 67/104 64.4% 105/94230402 0.0% 1/104 1.0% 6968075 NA +3440 chr4 + 190214555 21720429 21720428 21720546 118 AGAAAACTTTTTTCTTATTTTGTTTTATTTTCTTTATTTGTTTTACAGTAAAAGAGAATGACTCGGAGCTGTTGTTTTTTTTCCCCCATTCTGTTTTTTTTCTTTTTTTTTTTTTCAT chr4 + 94230402 83367319 83367318 83367426 83367319 83367318 83367426 108 AGTAAATGTTTGTTTTGTCTCTTCCTTTCTTCTCTGTTTTGTATGTGGCACA---------TTTTCAGTTGTTGTTTTTGTTCTCCCACCCT-TTTTTTTTTTTTTTTTTCTATTCAT ..x...:x...x.:..:.:.:x.::.x.:....:.:...xx.x.:::.:.x.---------:.:xx..:..........x...:....::..-........:........:.x..... 52M9D31M1D25M 73/108 67.6% 108/94230402 0.0% 10/108 9.3% -61646890 -32583512 +3137 chr4 + 190214555 21738721 21738720 21738790 70 CCAAATATCAAGGTCTATGCATTTGTCTGGCCATTTCCCCTGTCTTCCCCACTTTCTTCTCAATTTCCAG chr4 + 94230402 93138974 93138973 93139040 93138974 93138973 93139040 67 CCAAACAT---GGTCTGCGCATTTTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAG .....:..---.....::......x...x..........:xx.:......xx::..::.:.x........ 8M3D59M 50/67 74.6% 67/94230402 0.0% 3/67 4.5% -71400253 -22830149 +3032 chr4 + 190214555 21756553 21756552 21756591 39 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAATATCTA chr4 + 94230402 75300457 75300456 75300495 75300457 75300456 75300495 39 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCA ...............................:.x..::. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -53543904 -40686498 +3260 chr4 + 190214555 21756553 21756552 21756601 49 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAATATC-TATCAACTGCAG chr4 + 94230402 75300459 75300458 75300508 75300459 75300458 75300508 50 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATCATCTGCAG ...............:..................x:x-.....x...... 37M1I12M 44/49 89.8% 50/94230402 0.0% 1/49 2.0% -53543906 -40686496 +3145 chr4 + 190214555 21756968 21756967 21757039 72 GCACCTGTAATCACAGCTACTTGGGAGGCTGAGGCAGCAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:x..........::........x.xxxx...x.:........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -54276238 -39954164 +3127 chr4 + 190214555 21757102 21757101 21757178 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:.....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -19355076 -74875326 +3005 chr4 + 190214555 21757106 21757105 21757182 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.::...x:.....:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -19355072 -74875330 +3014 chr4 + 190214555 21757114 21757113 21757190 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x...........:.x:x.::...x:.....:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -19355064 -74875338 +3403 chr4 + 190214555 21757140 21757139 21757261 122 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAA----GGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:......::x.----.:..x:x.:x..:.....:x.:...x:xx:..:xxx.:...:.-----.:x.x:..:.:....x....:.x:...:...:....:.... 38M4I43M5I41M 79/122 64.8% 131/94230402 0.0% 9/122 7.4% -32254453 -61975949 +3501 chr4 + 190214555 21757155 21757154 21757284 130 GAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 81202743 81202742 81202872 81202743 81202742 81202872 130 GAGGGGACAAGGAAAGGAAGAGTAAAAGCAAGTCAAGCTGGGGGTCAAGATAAAAATCATTTAATAAACAAAGGAGAAGCAGAAGAGAGGAAAAAAAAAAAAAAAAACAAAGGaagtgatgcaaaaacaa ..::.:.x:.:::.......::x::...x...xx.:.xx..::.xx....x.:...xx.xxx..x...x....:.::.:x::....:..:..:....:....:....x...:...:x..x:x:....x.. 130M 77/130 59.2% 130/94230402 0.0% 0/130 0.0% -59445588 -34784814 +4305 chr4 + 190214555 21757161 21757160 21757321 161 AAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGA--AGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAA------AAGAAAAGAGAAAAGAAAGAAAGAA chr4 + 94230402 34805279 34805278 34805447 34805279 34805278 34805447 169 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAA ..x:...:..:.:..xx..:..x::....:..--.......:..:...:..x.x:.:...x:::.x.x...x..x.:.:x:x:.:..::...:x.x.:.:.x..:.x.:.::..:..:x....x.x::.::..xx...------..............x:.:.:..... 32M2I104M6I25M 99/161 61.5% 169/94230402 0.0% 8/161 5.0% -13048118 -81182284 +3080 chr4 + 190214555 21757193 21757192 21757275 83 AGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGA-GAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .....:.:.-.....x..x...x...x....x.:..:..xx.x.:.x..........:.:x.x...:..x...:..::.x... 9M1D73M 58/82 70.7% 82/94230402 0.0% 1/82 1.2% -19354985 -74875417 +3638 chr4 + 190214555 21757196 21757195 21757331 136 AAGGAAAGAAAG------AAAGAAAGAAAGAAAGAA--------------AGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAAAAGAGAAAAGAAAGAAAGAAACTATCATAA chr4 + 94230402 29252903 29252902 29253058 29252903 29252902 29253058 156 AGGAAAAGAAAGTGGCTGCAGGAAAGAATGAAAGCATATGCTCTGAGTGCATCAAGAAAGGCAGACATAAAGATACTAAAGGAAGAGAACTCAGTTAAAAAGAAAAAGTGATAGAAAAAAAAAAAACAATTGAAAGGGAAGAAAAAGTTTTAATAA .:.:........------x.:.......x.....x.--------------.xx.......:x...x.x.....x.xx...:...:....xxx.:xx:.........::x:.x......:....:..x.:xx:....::.::..:..::.x.x.... 12M6I18M14I106M 91/136 66.9% 156/94230402 0.0% 20/136 14.7% -7495707 -86734695 +3162 chr4 + 190214555 21757197 21757196 21757272 76 AGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG .....:::.:...:...:x......x:..x...x:.....:.:x:.:x.x...x.x:............::...:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -49843829 -44386573 +3006 chr4 + 190214555 21757214 21757213 21757295 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:.:xx.x...x..::......:.:x.x...:..x...:...:.x.:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -19354964 -74875438 +3022 chr4 + 190214555 21757218 21757217 21757293 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.::............:.::.:......x:x..::...xx.xx.x::.:.:..x:.....:.:.... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -16321560 -77908842 +3496 chr4 + 190214555 21773721 21773720 21773772 52 TTGCAACCCCTGTTTTTTTTTGTTGTTTTTTTTTTTTTGTTTGTTTGTTTTT chr4 + 94230402 43232278 43232277 43232329 43232278 43232277 43232329 52 TTGCATCTTCTGTTTTTGGTCGTTGTTTTTTTTTGTTTATTTGTTTGTTTTT .....x.::........xx.:.............x...:............. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% -21458557 -72771845 +3070 chr4 + 190214555 21773730 21773729 21773777 48 CTGTTTTTTTTTGTTGTTTTTTTTTTTTTGTTTGTTTGTTTTTGTTTT chr4 + 94230402 41855246 41855245 41855293 41855246 41855245 41855293 48 CTGTTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTT .......x.....xx.:........x..............x..x.... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -20081516 -74148886 +3182 chr4 + 190214555 21773735 21773734 21773777 43 TTTTTTTGTTGTTTTTTTTTTTTTGTTTGTTTGTTTTTGTTTT chr4 + 94230402 8555676 8555675 8555718 8555676 8555675 8555718 43 TTTTTTTGTTGTTTTGTTCGTTTTGTTTGTTTGTTTTTACTTT ...............x..:x..................::... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 13218059 NA +3002 chr4 + 190214555 21773745 21773744 21773781 37 GTTTTTTTTTTTTTGTTTGTTTGTTTTTGTTTTGTTT chr4 + 94230402 62526019 62526018 62526055 62526019 62526018 62526055 37 GTTTTTTTTTGTTTGTTTGTTTGTTTTAGTTTTGTTT ..........x................x......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -40752274 -53478128 +3340 chr4 + 190214555 21778186 21778185 21778268 83 GTATGTTTTATTTTTATTTGTTTCTTTTTCCT------TTTTTCCTTTTTTTTTTTCTTTTTTTTTTTTTTTTGAGACAGGGTTTCACT chr4 + 94230402 90152594 90152593 90152682 90152594 90152593 90152682 89 GTAGGTTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ...x.....x::xx:x.:....:.:.:...:.------..:........:.::....:.x.............x...x::::....... 32M6I51M 58/83 69.9% 89/94230402 0.0% 6/83 7.2% -68374408 -25855994 +3813 chr4 + 190214555 21785456 21785455 21785534 79 GTGGCGCATGTCTGTAATCCCAGTTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:..--...:.:....:......:.........x.xx.x...x.............:..x:xx:..:..:.. 11M2D66M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -54247745 -39982657 +3025 chr4 + 190214555 21798494 21798493 21798580 87 GAGAAAGCAAGACCCTGGGAAAAAAAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAGAAAGAAAGAAAGAA chr4 + 94230402 85790945 85790944 85791031 85790945 85790944 85791031 87 GAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAACCCAGAA .....::.x...::xx::...:..........:.......::::...:.:.:x.:.::....:x.::.x.x:.::.....xxx.... 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% -63992451 -30237951 +3349 chr4 + 190214555 21798509 21798508 21798551 43 TGGGAAAAAAAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAA chr4 + 94230402 75300449 75300448 75300491 75300449 75300448 75300491 43 TGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .....xx.................:..:............... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -53501940 -40728462 +3187 chr4 + 190214555 21798514 21798513 21798585 72 AAAAAAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 69368739 69368738 69368810 69368739 69368738 69368810 72 AAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAA ..:.....:.:....:.:.......:.:....:x.:x:...:...::..:..:x:.x.x..::.x....... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -47570225 -46660177 +3538 chr4 + 190214555 21798517 21798516 21798586 70 AAAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAGAAAGAAAGAA---------AGAAAGAAAG chr4 + 94230402 46677676 46677675 46677754 46677676 46677675 46677754 79 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAAAGAAAG ................:..:..........x:.x.xx.x.:.......xx.:...x....---------.......... 60M9I10M 57/70 81.4% 79/94230402 0.0% 9/70 12.9% -24879159 -69351243 +3214 chr4 + 190214555 21798518 21798517 21798578 61 AAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAGAAAGAAAGAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ....::...........:::.:..:x..............:.:.x....:::x:::..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -40677196 -53553206 +3839 chr4 + 190214555 21820226 21820225 21820318 93 TATTTTAAATGACACTAGATTATAAGATATGTATGTATATCTTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 9891116 9891115 9891208 9891116 9891115 9891208 93 TATTTTAAATGCAACTAAGGTAAAGAAAAAACTTGTAAATCCATTGCATCAGTGTGTGTTTATATATCTATATACCTATATATGTATATCCAT ...........xx....::x..x.::.x.x::x....x...:xx..:..xx........x.......x......:x.......:.....x:.. 93M 66/93 71.0% 93/94230402 0.0% 0/93 0.0% 11929110 NA +3029 chr4 + 190214555 21820261 21820260 21820319 59 TATATCTTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATA chr4 + 94230402 6083165 6083164 6083223 6083165 6083164 6083223 59 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTA .....x.x:...:........:.::..:.:.x.:..............x:x..:..:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 15737096 NA +3073 chr4 + 190214555 21820269 21820268 21820335 67 ATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATACATATATACA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..::......:::.......:x::.:..:.x:..:...:.x......:......:xxx......... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -24243030 -69987372 +3172 chr4 + 190214555 21837536 21837535 21837614 79 AAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAGAGGCAGATAGATAGAAAAGAAAAAAAATTGAC chr4 + 94230402 78266983 78266982 78267061 78266983 78266982 78267061 79 AAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAAC ...........xx....:.:......:.......:.::..:x:xx.:::x......::..x....:x..xx..:..:.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -56429447 -37800955 +3067 chr4 + 190214555 21862832 21862831 21862890 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -54170374 -40060028 +3025 chr4 + 190214555 21865343 21865342 21865413 71 GGAAGGGAGGAAGAAAGGAAAGGAGGAAGGGGAAAGGAAAGGATAGAACAAGACAGGATAGGACAAGAGAG chr4 + 94230402 10675421 10675420 10675491 10675421 10675420 10675491 71 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGAGTATGAGTCAAGGTAG ..:.:.:..::...........:....:....:.:.x.::..:x....x..:xx..x..::.x....:x.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 11189922 NA +3094 chr4 + 190214555 21883144 21883143 21883197 54 TGTTTCTGAGTTGTTGTTTTTTTTTTTTTTTTATAAGAGACAAGGTCTGCCTCT chr4 + 94230402 40221558 40221557 40221611 40221558 40221557 40221611 54 TGCTTCTAGAATATTTCTTTCTTTTTTTTTTTATAAGAAACAAGATTTGTTTCT ..:....:::x.:..x:...:.................:.....:.:..::... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -18338414 -75891988 +3239 chr4 + 190214555 21928100 21928099 21928147 48 AGATT-AGACTATATATATATATATATATACACACACACACACACACAC chr4 + 94230402 4409072 4409071 4409120 4409072 4409071 4409120 49 AGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACAC .....-..:..:..:.......................x.x........ 5M1I43M 43/48 89.6% 49/94230402 0.0% 1/48 2.1% 17519028 NA +4475 chr4 + 190214555 21948689 21948688 21948865 177 GTCCACGGGTCTGCACGGGAGCGCACCGCCGCTCG--GCCCGGGGGCGTCCGTGGCGCTGGGAGCGA---------------------GAGCTTCGGCGGCGGCTGCGGGCAGGGCGCGCGGAGC-----GGGCTG------CAGGTGC-GGGCGGAGGCCGGCGGGGGGCGCCGGGGGCGCTGCGCGGCCCTTGGCGGCGGGGGCGCGCGG chr4 + 94230402 16578198 16578197 16578405 16578198 16578197 16578405 208 GTCCAGCAGGCTGCGCGCCATCTCACACCCGCACGTGGCCGAGAGCCGCTCCCGGCGGTGAGAGCAAATGGGCGCAGCGGGTAGGAAAGGGTTCTGGCGGCGGCCCCGGGC----CGTGCCGAGCTGCTAGGGCTGACCTGCCTGCTGCCGGGCACGGGGCGGTGCGGGGATGCGGGGGCTCCGTGCGGCCTCTGGGGCCGGGGGCGTGCAG .....xx:.x....:..xx.x.x...xx....x..--...x:.:.x..::.x:....x..:....:.---------------------.:.:.::.........:x.....----..:..x....-----......------.x.x...-....:x:..x...:.x....xxx.......x.:.:......::...x.x........:..:. 35M2I30M21I23M4D10M5I6M6I7M1I62M 122/173 70.5% 208/94230402 0.0% 39/173 22.5% 5370491 NA +3438 chr4 + 190214555 21951376 21951375 21951454 79 GTGATGCATGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--....:.:.........::.:........x.xx.x...x..........::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -54081825 -40148577 +3419 chr4 + 190214555 21954448 21954447 21954515 68 CAGAGTGAAAAA-----CCCTGCCTTAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAATGAGAAGTCCTGCT chr4 + 94230402 27673811 27673810 27673883 27673811 27673810 27673883 73 CAGAGTGAAAAATGAATCATAGGCTTAAAAAAAAAAAAAAAGATGCAAAAAATAAAAGATGGGAAATTCTTCT ............-----.x:x.x....................x:x..:...x....:...:...:.:..x.. 12M5I56M 54/68 79.4% 73/94230402 0.0% 5/68 7.4% -5719363 -88511039 +3069 chr4 + 190214555 21962503 21962502 21962575 73 GAATGCAAAATTCCTGATTGCCCAGTCTAAAGTAGACAGAGGCACCCTCCCTTTCACTCCATTTTTTTTCTCC chr4 + 94230402 867613 867612 867685 867613 867612 867685 73 GAACGCAGAACTCCTGATTGCCCAAGCTGATGGAAAGGGAGAGATTTGCCCTCTTTTTCCTCTCTTTTTTTCC ...:...:..:.............:x..:.x.x.:.x:...:x.:::x....:.:x:...x:.:.....:... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 21094890 NA +3058 chr4 + 190214555 22029367 22029366 22029417 51 CTGCTTTCTGTTCTTTTTTCTGCTTTCTTCAGTTTTTTTCTCTCTATAAAT chr4 + 94230402 21606937 21606936 21606987 21606937 21606936 21606987 51 CTGTTTTCTGCTCTTTTTTTTCCTTTCTAAAATTTGTTTTTCTCTATTAAT ...:......:........:.x......xx.:...x...:.......x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 422430 NA +3825 chr4 + 190214555 22167952 22167951 22168041 90 TATACAGATTTATATATACACACAGATATGTGTGTGTGTATCTAGAGAGAGAGAAAGAGATTT------TGATTGAGATTTATTTTAAAGAATTGG chr4 + 94230402 49681666 49681665 49681757 49681666 49681665 49681757 92 TGTACACATTT---TATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGATTTACACAGTGATT-AGATATATTTGAAAAAATAGG .:....x....---....:.x.:.x.....:........:...:x.x.......:........------.....-....x.....x...:...x.. 11M3D49M6I5M1D21M 70/86 81.4% 92/94230402 0.0% 10/86 11.6% -27513714 -66716688 +3209 chr4 + 190214555 22185446 22185445 22185511 66 CAAAAAAAAAAGAAAAAAGAAAAAAAAGAAAATGAATGCACACCTCATTGCATTATATATTCACAT chr4 + 94230402 3859080 3859079 3859145 3859080 3859079 3859145 66 CAAGAAGGAAGGGAAAAAAAAAAAAAAGAAAAAGGATGAGCATCACATTGCAGTTGTGATTTACAT ...:..::..:.:.....:.............x.:...x:..:.x.......x.xxxx...:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 18326366 NA +3423 chr4 + 190214555 22212684 22212683 22212783 100 GTGAGACAGAGAGGAAGGGAAGAGGGAGAAAAAGGTAGGGATGAAGAAAGGAATAGACGGAGAGAAGAGAGGGAGAAACTGAAGAAAAGAAAAGAAATAA chr4 + 94230402 77211989 77211988 77212083 77211989 77211988 77212083 95 GTGAGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAGAGTTT-----ACTGATGAGAATGAAAGACAAAA ........:.x.....:..:.:..::.:x::.::.x:....x::...:.........xx.:........xxx-----.....x..:..x:.....x.x.. 72M5D23M 64/95 67.4% 95/94230402 0.0% 5/95 5.3% -54999305 -39231097 +3120 chr4 + 190214555 22216635 22216634 22216673 39 ATGCTCTCTCTCTTTCTCTGTCACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA .:...........:.....x........:.......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 9615334 NA +5031 chr4 + 190214555 22219749 22219748 22219932 184 AGACTGCAAGCAATTCTCTGAAACCGTCTGTGCCTCAGTTTTCTCATCTGTAAAATGGTGATGATAATTATTGTTT-TCTCATAGAATTGTTGTGACTATTAAATGAATTAATGTATAT--AAAGTTCTTAGAATCAATGTATATAAAGTTCCCAGCATCTAGTAATCATTGCTACTTATTATTACT chr4 + 94230402 83501140 83501139 83501312 83501140 83501139 83501312 173 AGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA-GGCTAAATCAATTCCTGTTTATTCAGGATCTTCAGAGTGA--GTACATAATAT----------TAGTAGTC-TTGCTTCTTTATTTTACT .....x:::....x.:x..x..x.:..x...............:..:...........x.x.....:.x...:::.-:....:..::x.:......-x::.....x....xx...x...--.:::.::.:...:.x.--...:....x:.----------.....:..-.....x...xx.x..... 76M1I19M1D22M2I16M2D11M10D8M1D18M 121/170 71.2% 173/94230402 0.0% 17/170 10.0% -61281391 -32949011 +4378 chr4 + 190214555 22244448 22244447 22244586 139 ACTAGCTGTGTGACCTTAGGTAAGTTATTTAAATTACATGTGTCTAAATTTCTGTATTCATGAAATGGGG---ATAACGATATT--ACCTTCTTAAGGTTTCCTTGAGGATTAACAATAGATGCAATTAATAATACATGTAAAA chr4 + 94230402 79037107 79037106 79037247 79037107 79037106 79037247 141 ACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTCCACCTTTCCAAAG-TGCTTTGAAAGC--ATTATAGGTGCTATTTGCAAAATATGCAAAA ..x......:..........x.........x.x...:x..x..:.x....:..x:.xx:..:.....x..---....:...x..--.....:::..:.-.x.:....::::--.:x....:...x...x::..x.:...:.... 70M3I11M2I12M1D12M2D31M 96/136 70.6% 141/94230402 0.0% 8/136 5.9% -56792659 -37437743 +3223 chr4 + 190214555 22259139 22259138 22259243 105 CTCAGGGAGAGGGCAATGGAATGATGAAAAATGGATTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACC chr4 + 94230402 56907930 56907929 56908031 56907930 56907929 56908031 102 CTCAGAGAGAGGGTCAGTCAGTGGTCAAGTCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTT---TCTTTCACC .....:.......:x.xxx.:..:.x..:xx::xx:....:.:::::x::....:...:.....:..........:......:x.x..:x.:.---...x..... 93M3D9M 65/102 63.7% 102/94230402 0.0% 3/102 2.9% -34648791 -59581611 +3308 chr4 + 190214555 22327160 22327159 22327232 73 TGCGCCTGTACTCTCAGCTACTTGGGAGGCTGAGGCATGAGGATCAGTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....x.::..........::........x.x..x.:.x..x....:.....:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -53706045 -40524357 +3069 chr4 + 190214555 22340421 22340420 22340489 69 AAATCCAGATAAAAATGGATCCACACTGTTCAAACCTGTATACACACACACACACACACACACACACAC chr4 + 94230402 43671825 43671824 43671893 43671825 43671824 43671893 69 AAATCTTATTAAAAAAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCAC .....:x:x......x::x.::x.x....::.x..x..........::..........x.....::... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -21331404 -72898998 +3373 chr4 + 190214555 22349289 22349288 22349362 74 GTATGCCTATAGTCCCAGCTACTTGGGAGGTTGAGGCAAGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::.x.:....:...........::...:....x.xx.x...x...........:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -53683915 -40546487 +3333 chr4 + 190214555 22350096 22350095 22350154 59 ACAAAGTGA--GACTCTGTCTCAAAAAACAAAAGAAACAAACAGACAAAAAAAACTTCAGT chr4 + 94230402 42933532 42933531 42933592 42933532 42933531 42933592 61 ATAAAGTGATGGACCCTATGTTTAAAAAAAAAACAAACAAACAAACAAAAAAAACTTCTGT .:.......--...:..:.x.:x.....x....x.........:..............x.. 9M2I50M 49/59 83.1% 61/94230402 0.0% 2/59 3.4% -20583436 -73646966 +3017 chr4 + 190214555 22365596 22365595 22365635 40 TAATATGTGCAAATATGTATGTATACACACACACACACAC chr4 + 94230402 85078508 85078507 85078547 85078508 85078507 85078547 40 TAATATATACAGATATCTATATATACACACACACACACAC ......:.:..:....x...:................... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -62712912 -31517490 +3430 chr4 + 190214555 22365785 22365784 22365900 116 ACATATAGCTTTAGATATATATATTTGAAAAGGAAAATTATATATATATATATATATATATATATATATATATATATATATTTACAAAGGAAAATAATTAAAAACCTACTTTAAGA chr4 + 94230402 90030065 90030064 90030174 90030065 90030064 90030174 110 ACAGATAACTG-AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTACTGGTAGA-----AATGTAGCATTGTAAAAATCATGCTTTAAGA ...x...:..x-.:...x.x.x........:.:....x........:.:.:............x..xx.x..:xx:..x.-----..x.x.:x..x:.x....x.x.:........ 11M1D68M5D31M 78/110 70.9% 110/94230402 0.0% 6/110 5.5% -67664280 -26566122 +3063 chr4 + 190214555 22444004 22444003 22444061 58 TGTGTGTGTAGGTGTGCTTTTTTGTTTTTTGTTTTTGTTTTTGTTTCTTTTTCATTTA chr4 + 94230402 41434329 41434328 41434382 41434329 41434328 41434382 54 TGTGTGTGTATGTGTGTTTTCTCTCTTTTT----TTGTTGTTGTTTCCTTTTCCTTTA ..........x.....:...:.:x:.....----.....x.......:.....x.... 30M4D24M 45/54 83.3% 54/94230402 0.0% 4/54 7.4% -18990325 -75240077 +3142 chr4 + 190214555 22450932 22450931 22451014 83 AACAGAAAAAAAAAAAAAAAATATATATATATATATATATACAC-CAGATCATTAATACAA---GTTATCTCAGGATGATGTGACTG chr4 + 94230402 1495001 1495000 1495082 1495001 1495000 1495082 82 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGAT-----ATGCAAGAGGTTACTTTGGAGTGGGGTGGTTG ..............x.:....x..........:.:..:.....:-:....-----..:...---....::.::.::..:x...::.. 44M1I5M5D6M3I23M 59/78 75.6% 82/94230402 0.0% 9/78 11.5% 20955931 NA +3257 chr4 + 190214555 22472517 22472516 22472597 81 AAATATTCCTGTGTGTTTCTGTATA-TATATATATACACACAAACACACACACACACGTATATAACCTAACTTAAAGACATC chr4 + 94230402 46140831 46140830 46140912 46140831 46140830 46140912 82 AAATGTTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTC ....:..x.xx.:.xx..:...:..-........:......xxx....:..........:....xx.x:.....x...x:.. 25M1I56M 59/81 72.8% 82/94230402 0.0% 1/81 1.2% -23668314 -70562088 +3208 chr4 + 190214555 22488302 22488301 22488381 80 TGCAGAACATTGGTTC-------------TCAACTCTGACTGCACATCAAAATAATTTATGAAGCTTTAAAAAAAAAAAAAAGTC--AAAGCCTT chr4 + 94230402 10543906 10543905 10544000 10543906 10543905 10544000 95 TACAGAATACTGCTTCATCTAATAGCACTGCAATTTTTATTACAAATTACAATGATTTGAGAAGTCTTAAAAAAAAAAAAAAGTCTAAAAGCGTT .:.....:.:..x...-------------x...:.:.x.:.:..x..:.x...:....:x....::...................--.....x.. 16M13I56M2I8M 61/80 76.2% 95/94230402 0.0% 15/80 18.8% 11944396 NA +3315 chr4 + 190214555 22509372 22509371 22509445 74 GTGCACCTGTAATCCCAGCTACTCGGGGCGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.:::x......x.xx.x...x.:........::.:..x:xx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -53523832 -40706570 +3370 chr4 + 190214555 22518632 22518631 22518703 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x:..x.:........x:.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -53514574 -40715828 +3327 chr4 + 190214555 22523772 22523771 22523842 71 TTAATTAATTAAAATGAAATGAAATAAAACTAAACATTCAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 17081910 17081909 17081980 17081910 17081909 17081980 71 TTATTTCATTATAATGGAATTGGCCCAGATTTAGCACTCAGCTTTTTTTTTTTTTTTTTTCCCCTTTTTTT ...x..x....x....:...x::x:x.:.:.x.:..:....:.:................::::....... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 5441862 NA +3245 chr4 + 190214555 22549873 22549872 22549962 90 TCCATTTCTTATATAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTT-----------CACTGCATGCAAAATCAGGTGCAAGA chr4 + 94230402 63648326 63648325 63648426 63648326 63648325 63648426 101 TTCCTTTTTCTTACAGCTGTATTGTTTTTTTTTTGTTTGTTTTTTTGGTTTTTTTTTATGCTTCATTGCTTTAGGCATTATATGTATTGACAGATGCAAAA .:.x...:.:x..:....x.x..x..........x...x.......xx.........x.:...:-----------..:.::...:.xx:x...:.....:. 64M11I26M 64/90 71.1% 101/94230402 0.0% 11/90 12.2% -41098453 -53131949 +3606 chr4 + 190214555 22597644 22597643 22597729 86 GTGTATGTGTGTGTGTGTGCA--------TGTGTGTGTGTATGTGTATGTGTGTGTGTATATGTGCGTGTGCGTGTGCATGTGTGTGTGTTATG chr4 + 94230402 5214232 5214231 5214325 5214232 5214231 5214325 94 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACATCCTG ....:..:.::x....x....--------.::....:..:..x..:.........:.:.x.:...:......:..::x.......::::.:x.. 21M8I65M 59/86 68.6% 94/94230402 0.0% 8/86 9.3% 17383412 NA +3416 chr4 + 190214555 22622477 22622476 22622543 67 TATGTGTGGCTCAAGATAATTCTTTTTTTTCCAATGTGGCCCAAGGAAGTCAAAAGACTGGACACCC chr4 + 94230402 43915637 43915636 43915703 43915637 43915636 43915703 67 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCC ...:.....::..........::....:x::x......x....::x...x......x:....::... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -21293160 -72937242 +3073 chr4 + 190214555 22624483 22624482 22624527 45 CAATGTGTGTGTGTATATATATGTGTGTGTGTATATATATATGTG chr4 + 94230402 48958672 48958671 48958716 48958672 48958671 48958716 45 CACTGTGTGTTTGTATACATATATATGTGTGTATATATAGATATG ..x.......x......:....:.:..............x..:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -26334189 -67896213 +3334 chr4 + 190214555 22640094 22640093 22640167 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATTGCTTGAACTTGGAAGGCGTAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::.......:x.xx.x...x::.......:::....x:x.:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -53393110 -40837292 +3346 chr4 + 190214555 22669197 22669196 22669282 86 AACTATAGGGTAGCACTGGCAGGAAGAGAAGTGTTTTATATATA---TATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 24792580 24792579 24792668 24792580 24792579 24792668 89 AACTTTTTGAAAACAGTGTGAGAAAGAACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAA ....x.xx.:x.:..x..xx..:....:x..x:..x:x...:..---..................x:........x.........:x.. 44M3I42M 63/86 73.3% 89/94230402 0.0% 3/86 3.5% -2123383 -92107019 +3063 chr4 + 190214555 22669217 22669216 22669283 67 AGGAAGAGAAGTGTTTTATATATATATATATATATATATATATATTTTTTTTT-----------TTTTTTTTTTTAAT chr4 + 94230402 34623060 34623059 34623137 34623060 34623059 34623137 78 AAAAAAACAGATTTTCTATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGATTTTTCCTTTTAAT .::..:.x.::.x..:.........xx......:......:.:....:.....-----------.....::....... 53M11I14M 51/67 76.1% 78/94230402 0.0% 11/67 16.4% -11953843 -82276559 +3294 chr4 + 190214555 22675098 22675097 22675232 135 CCTCCCTTCCTCCCTCCCCTCCTTCCTTCCTTCCCTCCTTCCCTCCTTCCTCCCTCTCTTTCTCTTTCTCTCTCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 28987819 28987818 28987942 28987819 28987818 28987942 124 CCTACCTTTTTAACTTACCTGTTTTATTTTTTCTCTTTCTCACTTCATC-----------TCACTTTCTTACCTTCCTTTATCCTCTTGACTTGAGTATTAGCACATCTTTCTTTTTTTTTTTTTGTCCTTTCTT ...x....::.xx..:x...x:..:x..::...:..:::..x..:.x..-----------..x......:x.::.....:x.:.....xx...xxx.x:.xx.x.x:...:...:...:.....:x.:....... 49M11D75M 78/124 62.9% 124/94230402 0.0% 11/124 8.9% -6312721 -87917681 +3971 chr4 + 190214555 22675137 22675136 22675398 262 TCCCTCCTTCCTCCCTCTCTTTCTCTTTCTCTCTCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCC-------TTCCCTTTCTCTCTCTCTTTCTTTCTTTTTTTCACCAAACCTTACTTTTTTCCC chr4 + 94230402 36929148 36929147 36929403 36929148 36929147 36929403 256 TTTCTACCTTTTCCCTCCATTTCCCCTAGAATCCCAACTTTTTCCACGTTTTTCTCTT-------------CATTCTCACATTTTCCACCCTT--TTCCCCAACATTCCCAATTTTTTTCCACCATTTCCCCTGCTTTCCCACCTTTTCCCACATTATCCCCTACATTCTTACATTTTCCCTACCTTTTCTCCTACGTTCCCACGTTTTCTCGTAAATTCCAAACATTTCTTCCTTTTTCCCTACATTCCCACTTGTCCCACCTTTCCCCC .::..x.:.::......:x....:.:.xxxx..:.xx...::.:.x.x...:.:....-------------.x....:x.x.....:x:.:..--...:.:xx.x...:.xx.:....:::x.:x.:.::.:.x.....::x.--....::x.x..x.::.:.x.x.....x.x:.......x....:::....x.x....:x.x...:.-------....xxx:x.:...::....:.::..x:x..:.xx.xx::.::..:...::... 58M13D22M2D48M2I65M7I54M 143/247 57.9% 256/94230402 0.0% 24/247 9.7% -14254011 -79976391 +3145 chr4 + 190214555 22675153 22675152 22675217 65 CTCTTTCTCTTTCTCTCTCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCT chr4 + 94230402 57538447 57538446 57538511 57538447 57538446 57538511 65 CTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ..:.....::...x...:.........:..x..x.:..:::...::.:x:...:...:..:.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -34863294 -59367108 +3684 chr4 + 190214555 22675170 22675169 22675325 156 TCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTT chr4 + 94230402 64726429 64726428 64726583 64726429 64726428 64726583 155 TCTTCTTCATCCTTTGCTCTGGATTT-TCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTT ...:....x.:..:.x:...xxx...-...xx:..:..x..::x...:.:x.xx..:.xxx.x:..:.:.x:..x.:x::x...x:x...:x.:.:....:....:x.xxxx.:...:....:..::.:x:............:......:..:.. 26M1D129M 92/155 59.4% 155/94230402 0.0% 1/155 0.6% -42051259 -52179143 +3666 chr4 + 190214555 22675170 22675169 22675294 125 TCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 48874867 48874866 48874991 48874867 48874866 48874991 125 TCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ....::.:....x.x.x...:.:...x.xxx...::x.::.:....:x.:.:..x::.x.......:.x...x.:x..::...:....x:.......x.:.::.xx.x.:.x.x.:......::. 125M 76/125 60.8% 125/94230402 0.0% 0/125 0.0% -26199697 -68030705 +3097 chr4 + 190214555 22675174 22675173 22675246 73 CTTCCTTCTCTTTTCTTTCTTTC-TCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTC chr4 + 94230402 53757788 53757787 53757861 53757788 53757787 53757861 74 CTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCC .....x...:...:x::....xx-..:.:.:..::..::.:.:......:..:....:.....:...:..:.:. 23M1I50M 49/73 67.1% 74/94230402 0.0% 1/73 1.4% -31082614 -63147788 +3034 chr4 + 190214555 22675186 22675185 22675276 91 TTCTTTCTTTC----TCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...----...:.x..:...:xx.:::....:.:.:......x...xx:.::x....:x.x:......x.....::..::.:...... 11M4I80M 59/91 64.8% 95/94230402 0.0% 4/91 4.4% -60651748 -33578654 +3409 chr4 + 190214555 22675200 22675199 22675300 101 CTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .:.x.x......:x...x::x.....x.:.:.:.xx.:::......:.......:x..:xx:...x.::..x:x.:.....x.....::..::.:...... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% -60651728 -33578674 +3295 chr4 + 190214555 22675203 22675202 22675296 94 TCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326935 83326934 83327028 83326935 83326934 83327028 94 TCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .....:x...x::x.:...x.:.:.:.xx::.:............:..x..:xx:...x.::..x:x.:.....x.....::..::.:...... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -60651732 -33578670 +3035 chr4 + 190214555 22675205 22675204 22675288 84 CTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...::.::......x.:.:.x:::..:.....::.:.xx..x::x:..........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -34696821 -59533581 +3233 chr4 + 190214555 22675216 22675215 22675300 85 CTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCT-GTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..........::..x.::..-x.:..:::....:....xx:.x..x.:.........:...::...x.....x..xx:.x..... 20M1D64M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% -34696810 -59533592 +3638 chr4 + 190214555 22675219 22675218 22675336 118 TTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697118 63697117 63697235 63697118 63697117 63697235 118 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...x..:..:..:..::.xx.x...:::::.:.....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:...:....:..:..:...:.......::. 118M 70/118 59.3% 118/94230402 0.0% 0/118 0.0% -41021899 -53208503 +3869 chr4 + 190214555 22675222 22675221 22675340 119 CTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..::..:.xx.x.:.::::...:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx......:..:..:..:..:...:.......::. 119M 72/119 60.5% 119/94230402 0.0% 0/119 0.0% -41021895 -53208507 +4062 chr4 + 190214555 22675226 22675225 22675342 117 CTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x..:....:::..:.xx.x.:..:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx..::.::..:..:..:..:...:........ 117M 73/117 62.4% 117/94230402 0.0% 0/117 0.0% -41021891 -53208511 +3319 chr4 + 190214555 22675236 22675235 22675356 121 CTTTCTTTCTCTCTCTTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:.....::..::--:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....::.x:xx.:::.::..:..:..:..:.....:.:.::...x.:. 19M2I102M 71/121 58.7% 123/94230402 0.0% 2/121 1.7% -41021881 -53208521 +3390 chr4 + 190214555 22675239 22675238 22675374 136 TCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTTCTCTCTCTCTTTCTTTCTTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGT--------------CTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.x.::.....:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.--------------...xxx:.:..x...::.:x.xx:.....::....:.::.:...:....:....:.x... 62M14D60M 76/122 62.3% 122/94230402 0.0% 14/122 11.5% -41021879 -53208523 +3363 chr4 + 190214555 22675251 22675250 22675426 176 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTTCTCTCTCTCTTTCTTTCTTTTTTTCACCAAACCTTACTTTTTTCCC------------------CTAATCCTTCCTTCCCTCCCTGCTTCCC chr4 + 94230402 67728276 67728275 67728469 67728276 67728275 67728469 194 TTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTC ......x:..x....:....xx:.::..:x.......x.x...x:x::::..:...:..::::x.x:.....::x:x..:..:...x..:x..:x.:x..x:::..x::x.....:::x.:..:.x.x...:x:...x.:.:x.:.:.------------------.:.:....:....xx....:.x:..::. 148M18I28M 98/176 55.7% 194/94230402 0.0% 18/176 10.2% -45053025 -49177377 +3423 chr4 + 190214555 22675256 22675255 22675429 174 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTTCTCTCTCTCTTTCTTTCTTTTTTTCACCAAACCTTACTTTTTTCCCCTAATCCTTCCTTCCCTCCCTGCTTCCCTTA chr4 + 94230402 67728277 67728276 67728434 67728277 67728276 67728434 158 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCC--------CCA--------TCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCA .....x:..x....:....xx:.::..:x.......x.x...x:x::::..:.:......:.x.x:.....::x:x..:..:...x:..x..:x..x..x:::..x:.x.....:--------...--------.:..:.x...:.:.:...:.:..x::.:..x.x..x.::. 115M8D3M8D40M 94/158 59.5% 158/94230402 0.0% 16/158 10.1% -45053021 -49177381 +3149 chr4 + 190214555 22675278 22675277 22675396 119 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTTCTCTCTCTCTTTCTTTCTTTTTTTCACCAAACCTTACTTTTTTC chr4 + 94230402 80503276 80503275 80503393 80503276 80503275 80503393 118 TCTCCCTTTCCCATTTAACTTCCTTTTCTCAGATTCCAATTTTTCTTTATTTTCTGCAGTTTTTCTTTGAAGTTTCTCTTTCTCCTGCCTTCTTTTATTC-CCCAGCCTCTTTTCTTTC ...::.....::x:..xx:...:..:.:..xxx....xx.::...:..x:..:..x.xx.::..:::.xxxx.......:....:.x.:.......x...-..x.:...:x:..:.... 100M1D18M 72/118 61.0% 118/94230402 0.0% 1/118 0.8% -57827998 -36402404 +3092 chr4 + 190214555 22678860 22678859 22678911 52 AAAAAAAAAACAAACAAAACAAAACAAAAAACAAAGTAAGAATGGAGTGAAT chr4 + 94230402 46919073 46919072 46919124 46919073 46919072 46919124 52 AAAAAAAAAGTAAATAAATCCAAACAAAAAAAAAGATGACAATGGAGTGGAT .........::...:...x.x..........x..::.:.x.........:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -24240213 -69990189 +4082 chr4 + 190214555 22713009 22713008 22713085 77 TCATTCTCATTTTACATATGAGGAAACTGAGGCACAGGGAGGTTGAGTGAATTTCCTAAGGTCACAGATATAGTAAG chr4 + 94230402 82283120 82283119 82283196 82283120 82283119 82283196 77 TTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG .:..xx......:.:.:...:........:.:......x..:..:.....x.xx............x.xx....:.. 77M 58/77 75.3% 77/94230402 0.0% 0/77 0.0% -59570111 -34660291 +3110 chr4 + 190214555 22726393 22726392 22726447 55 TTTGTTTTTTTTTTTTTTTGGTTTTTTTTTGAAAGGGAAAAAAATTTTTTTAATT chr4 + 94230402 24521795 24521794 24521849 24521795 24521794 24521849 55 TTTGTTTTTTGTTTTTTTTGTTTTTTTTTTCCAAAGGAAATATACTTTTTAATTT ..........x.........x.........xx..:.....x.x.:.....x.x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -1795402 -92435000 +13385 chr4 + 190214555 22727368 22727367 22727951 584 GAGATGTTCATAGCAGCACACACCTGCGGCTCTTTTTCGGTTCTGGAGGCTCCAGGGCAGCCAATATTGCTTCGTCAAATACATTCTTTAGGCCTTTCTTTGTAAGTGCAGAACACTCCACATACTTGACAGCCTTCAGGTCACGGGCCAGCTTTTCAGCAGTCTC------TGGAGTGATAGGCTTCTG--TTTGTTCTTGGCAGGTTTCTCAATAGTAGAGGGGTCATCTCTGAGATCAATTTGAGTCCCAACAAGCAAAAAAGGAGTCTTTGGACAGTGGTGAGTTATCTCAGGCACCCACTTTTCTTTCACATTTTCAAATGAAGATGGAGAGACCACTGAAAAACAGACTAGAAATACATCTGTTTGTGGATAACTCAGCGGTCGTAATCTGTCATAATCCTCTTGCCCTGCAGTATCAAAAAGTCCAAGAGTATATGGTTCTCCACCAATCATAACTGTGACTGCATAGTTGTCAAAAACAGTCGGTACATATTCCGATGGAAATTTGTTTGTTGTGTAGGATATCAGGAGACATGTTTTACTAACAGCACCATCGCCCACAACAACACACTTAATTGTCTGCATT chr4 + 94230402 2233581 2233580 2234164 2233581 2233580 2234164 584 GAGGTAACTACAATAAGACACATTTCCTTGTGTTCTTCTTTGTCACAGGATAAAGAACTGCACGCACAGCTTCAGCAAACACCTCCCGAACACCCTCCTGATTCAATGCTGAGCACTCCAAATATTTGACTGCTCCGATTTGTTTAGCCAGT------GAAGTCCCCTGTTGTGGGGTAGTGGGAGCCAAGCTTTGCTCTT--TTAACTTTTTAACTGTTTCCAGGTCGTTTCTCAAGTCTCTCTTCGTGCCCACTAAAAGAATGGGAACATTAGGACAGTGGTGAGAAACTTCAGGATGCCACTTGTGCCTCACATTTGCATAGGAAGACGGGCTGCCAATGGAGAAGCAGATGACAAATACATTGGTTTGAGGATATGAGAGTGTGCGCAGACGGTCATATTCCTCCTGGCCTGCAGTGTCCCAGAGATTCAGGCTAACCGTCCGGCCATCAACAGTCATTTGGGCACTATAGTTGTCAAACACAGTAGGGATGTACTCTTCTGGGAAGGCATTGGTGGTATAGCTGATGAGAAGACAAGTTTTTCCCACAGCACCATCTCCAACAACTACGCACTTTATAGTCTGCATT ...:.:x::.:.::.:x.....::.x.xxx.x..:...xx.x:::x...x.xx..::.x..xx::.:x.....:x....:..x.:.:xx.x:..:.:..xxx.x.:...x..:.......x...:.....x..:::x.xx.xx:x:.....:------.x....:.------...:..::.:..xx:.x:--....:....--:x:::..:.:..:x..xxxx:....:.:...x.::..xx.:.xx..x..x..x.:x.:..x:...::x..x.............xx.::.....xxx......x.x::........x..x.x.....:..:xx.x.x.:x..:..:....:x.x........:x.....x.....xxxx..:.xx..:.:x.x......x.....:..x........:..xx.:..x::x..:x..xx:.x::xx...:...:x:.x.:.xx.:.xx:............x.....x..x.::..:..:xx...:..xx::..x..x..:...xxx..x..:.....x.....x.:x...........x..x.....x..:.....x..x......... 152M6D8M6I18M2I9M2D389M 351/576 60.9% 584/94230402 0.0% 16/576 2.8% 20493787 NA +3727 chr4 + 190214555 22738375 22738374 22738462 88 GTGGTGTATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCAGAGGTTGC----CATGA-GCCAAG chr4 + 94230402 76033201 76033200 76033291 76033201 76033200 76033291 91 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ......:.:.--....:.:...........::........x.xx.x...x.:..............x:xx:..:..:----.....-...... 10M2D65M4I5M1I6M 67/86 77.9% 91/94230402 0.0% 7/86 8.1% -53294826 -40935576 +3480 chr4 + 190214555 22775002 22775001 22775059 58 TTTACTGAGATTCTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTGAGACAGA chr4 + 94230402 14999520 14999519 14999577 14999520 14999519 14999577 58 TTTATGTGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTTGAAGATTGA ....:xx:.:..:................:..x................x:...:x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 7775482 NA +3206 chr4 + 190214555 22775009 22775008 22775052 44 AGATTCTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTG chr4 + 94230402 54488400 54488399 54488443 54488400 54488399 54488443 44 AGATTTTTCAGTTGTTGTTCTTGTGTTTTGTTTGTTTGTTTTTG .....:..:x.........x....x................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -31713391 -62517011 +3344 chr4 + 190214555 22775015 22775014 22775086 72 TTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTGAGACAGAGTCTCACTC---TGTTGCCAGGTTGGAGGA chr4 + 94230402 39188523 39188522 39188597 39188523 39188522 39188597 75 TTTTTTTGTTGTTGTTGTTTCTGGGTTGTTTTTTTCTGAAACAGAGACCTGTTCTTGTGCTGCAAAGTGGCAGAA ....x...............:.x.x......x...:...:......x.::::..---..:...x.:..x.x..:. 54M3I18M 54/72 75.0% 75/94230402 0.0% 3/72 4.2% -16413508 -77816894 +3166 chr4 + 190214555 22775018 22775017 22775051 34 TGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTT chr4 + 94230402 59675248 59675247 59675281 59675248 59675247 59675281 34 TGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -36900230 -57330172 +3407 chr4 + 190214555 22785523 22785522 22785599 77 TTTATATTCCAAGTCTGTGGTAGGTGATATTTAA------AGCATTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTTTGCTT chr4 + 94230402 23685865 23685864 23685945 23685865 23685864 23685945 81 TCTATATTACAAATTATAGATAGG--ATATTCAAGCTTACAGTATTTTTTTTTGTTTGTTTGTTTGTTGACCTTTTCCTGCTT .:......x...:.:xxx.:....--.....:..------..:.........................xx::....::..... 24M2D8M6I43M 59/75 78.7% 81/94230402 0.0% 8/75 10.7% -900342 -93330060 +3054 chr4 + 190214555 22785555 22785554 22785592 38 AAAGCATTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTT chr4 + 94230402 7161725 7161724 7161762 7161725 7161724 7161762 38 AAAGAGTTTTTTTTTGTTTGTTTGTTTGTTTTTCTTTT ....x:...........................:.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 15623830 NA +3075 chr4 + 190214555 22785556 22785555 22785595 40 AAGCATTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTTT chr4 + 94230402 84639545 84639544 84639584 84639545 84639544 84639584 40 AAGTGTTTTTTTTTGTTTGTTTGTTTGTTTTTTTTCCCTT ...::..............................:::.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -61853989 -32376413 +3359 chr4 + 190214555 22805407 22805406 22805468 62 TGAGCTATTTCTTTTTTTCTTTTTTTTCTTTTTTCTTTCTTTCTTTTTTTTCTTTTTTTTTT chr4 + 94230402 44395195 44395194 44395256 44395195 44395194 44395256 62 TGAGCTAATTCCTTCTTTCCTTTTCTCATGTCTCCCTACTTTTTTTTTTTTCAGTTTTTTTT .......x...:..:....:....:.:x.x.:.:.:.x....:.........xx........ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -21589788 -72640614 +3222 chr4 + 190214555 22815348 22815347 22815414 67 TATATATATATATATATATATATATATATATATATATT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x..----..:...x..:..............x:... 38M4I29M 52/67 77.6% 71/94230402 0.0% 4/67 6.0% 14992084 NA +3514 chr4 + 190214555 22815350 22815349 22815438 89 TATATATATATATATATATATATATATATATATATTTT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTAGAGTCTCACTCTGTTG chr4 + 94230402 7823264 7823263 7823355 7823264 7823263 7823355 92 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGT-GCTTCTTATTCTAATG ..:...:.........:.:......x.:.:x.x..:..----..:...x..:..............x:.....:x.-.xx...:.:...:x.. 38M4I34M1D16M 65/88 73.9% 92/94230402 0.0% 5/88 5.7% 14992086 NA +3037 chr4 + 190214555 22815363 22815362 22815454 92 ATATATATATATATATATATATTTTTTTTTTTTTTTTT------TTTTTTTTTTTTTTTTGAGTTAG--AGTCTCACTCTGTTGCCCAGACTGGAGTGCA chr4 + 94230402 24792626 24792625 24792722 24792626 24792625 24792722 97 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC---CTGGAATGCA ...................x:........x........------..x:x..xxx.....x.....::--x:.....x...xxxx...---.....:.... 38M6I23M2I18M3D10M 69/89 77.5% 97/94230402 0.0% 11/89 12.4% -1977263 -92253139 +3631 chr4 + 190214555 22871786 22871785 22871873 88 CACTTTATTAAGTGTCCATTTCACAGACAAGGAAACTGAGATGTAGAGCTGTTAAATAACTAGCCCAAGGTCACACAGCTTATAAGGA chr4 + 94230402 82283113 82283112 82283198 82283113 82283112 82283198 86 CATTGTATTA--TAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAGGA ..:.x.....--.:x:.......:.x.:::........:..:::..:xxx:....:.:....:..:............:.x:.:.... 10M2D76M 59/86 68.6% 86/94230402 0.0% 2/86 2.3% -59411327 -34819075 +3001 chr4 + 190214555 22910553 22910552 22910610 58 GGTGGGGAGAGGAGGAGAGAGAAGGAAGGGGAGGAAGGGGAGAGAGGATAGGAGGAAG chr4 + 94230402 56006697 56006696 56006754 56006697 56006696 56006754 58 GGTAGGAAGAAGGTGAAAGAGGAGGAAGGCGGGGGAGGGTGGGGAGGAGGCGAGAAAG ...:..:...:.:x..:....:.......x.:..:....x:.:.....x:x...:... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -33096144 -61134258 +3354 chr4 + 190214555 22936715 22936714 22936772 58 AAATGTGGGTTATGTCTACCTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTGAGA chr4 + 94230402 46069007 46069006 46069062 46069007 46069006 46069062 56 AAATGTAG-TTCTGGATATCTTTTTTTTT-GTTGTTGTTGTTGTTTGTTTTTTTAAGA ......:.-..x..xx..:..........-........................:... 8M1D20M1D28M 50/56 89.3% 56/94230402 0.0% 2/56 3.6% -23132292 -71098110 +3350 chr4 + 190214555 22938959 22938958 22939013 55 TTCTTTTTCCTCCTCCTCCCTTTTCTCCTCCTCTTCTTCCTCCTTTTTCTCACCT chr4 + 94230402 58890516 58890515 58890570 58890516 58890515 58890570 55 TCTTTTTTTCTCTTCCTCCCTTTCCCCCTCCTCCTCTCCACCACTTTGCTCACCT .::.....:...:..........:.:.......:...:.x:.x:...x....... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -35951557 -58278845 +3081 chr4 + 190214555 22952323 22952322 22952405 83 AAAAAAAAAAAAAAAAAAAGGAAATAATAGTAAAAATACGTCCCATAGTACATAATAATGCAGATATGCTATAATAATTATAC chr4 + 94230402 24699848 24699847 24699930 24699848 24699847 24699930 83 AAAAAAGAAAAAGAAAAAAAAAAACATTTGCAACAACATTTCTAACAATATGGAAGGATACATGTATGCAACAACAATCTCAC ......:.....:......::...:.x.x.:..x..:.:x..:x.:.:..::x..x:..:..x:.....x.:..:...:x:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -1747525 -92482877 +3046 chr4 + 190214555 22963084 22963083 22963165 82 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 + 94230402 66493586 66493585 66493667 66493586 66493585 66493667 82 CTATTTTGCTATTTTTCGTTTTTAATTTTTCGGTTTTTGTATTGTATTTTTTTTTTTCTTCCATCCTCCCTTCCCTTCCCCC ..x.:..x..x.:....x..:..xx...:.:xx...:.x.x..x:x..:...:...:.....x....:......:.:.::.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -43530502 -50699900 +3017 chr4 + 190214555 22996095 22996094 22996162 68 TTGTCTTTGCAATCTCAAGATATCTTTTTTTAATGAAATAAGATGTTTGAGAGAATATTAGAATTTTT chr4 + 94230402 74256696 74256695 74256763 74256696 74256695 74256763 68 TTGTTTTTGTAATGTAAAGATATCTTTTTCTGATGAAGAAAAAGGTCAGAAAGATCCAAAAGATTTTT ....:....:...x.x.............:.:.....:x..:.x..:x..:...x:xxx.::...... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -51260601 -42969801 +3182 chr4 + 190214555 23083796 23083795 23083847 52 AGAAATCCTATATTTTGTTTTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 69460566 69460565 69460617 69460566 69460565 69460617 52 AGAAATGATATTTTTAGTTGTTTGGGTTTTTTTTGTGTTTTTTTTTTTTTTT ......xx...x...x...x....:.........x.x............... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% -46376770 -47853632 +3143 chr4 + 190214555 23091564 23091563 23091647 84 TTTTTTCATTTTATCTCGTCACTTCTTCCTTTTGTAACTGCATTTTCTTTTACTTTGCTTTAACTGTTTTTTCTCATTGTCTTC chr4 + 94230402 28328464 28328463 28328547 28328464 28328463 28328547 84 TTTTTCCATTTTATATTGTCTGTTTCTCCTTTTATGTTTTGATTTTCATTTATTCTACTTTTTCTCTCCACTTTAATTTTTTTC .....:........x.:...xx..::.......:.:x:.xx......x....:.:.:....xx..x.::x:.:.x...x.:... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -5236900 -88993502 +3248 chr4 + 190214555 23094278 23094277 23094349 72 GCACCTGTAGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATTACATGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::.:......x.xx.x...x:..x.......:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -52938928 -41291474 +4011 chr4 + 190214555 23164142 23164141 23164362 221 CCTTACTCAT--CTTCATTCTGTTTCTCCT--------------TTCTCCCTCCCTCTTTTCTTCCTTTCCTTTCTTCCTTCCTTCTT--------TCTTTCCTTTCTTCCTTCC--TTCTTTCTTTCCTTTCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTT chr4 + 94230402 33980685 33980684 33980926 33980685 33980684 33980926 242 CCCTACCCATTTCTTGACTCCATTGCCCCTACTTCCAATTCATATTTTCCATTCCCGCTTTCTGCCACTTCTTGCCTTTTGCTGGTCTCTGACAAGTTTCTACTTTCTCACCTCAAATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCC-----CCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTT ..:...:...--...x.:..::..x.:...--------------..:...x.:..:x:.....x..x:.:...x.:.::.x.:xx::.--------.:.:.x......:x.:..x--....:.xx.:x:...x.....x.xxx.x.:::...x...:x.....xx....x.....:x......:.....x.x.....-----:..::.......x..::.x...xxx:.:x...:x.:.:x..::.. 10M2I18M14I44M8I19M2I80M5D45M 135/216 62.5% 242/94230402 0.0% 31/216 14.4% -10816543 -83413859 +3167 chr4 + 190214555 23164162 23164161 23164256 95 TTTCTCCTTTCTCCCTCCCTCTTTTCTTCCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:..::x...x..x..::.x.:..::.xx:::........:..:::.:x..:xx:..:x.....x.x.::....x.....:......:.:.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% -60162772 -34067630 +3035 chr4 + 190214555 23164257 23164256 23164365 109 TTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCT chr4 + 94230402 21020308 21020307 21020416 21020308 21020307 21020416 109 TCCTGTCTTTTTCTTCTTTTAGCTTCCTCCTCGTTTCCTCTTCTTGTTTTGTCTCTCCCATGGATCTTTTTCATACTTACGGCATCGTTTCTTTCTTTTCTTGCTTCCT .:..x..:...::.:...::xx...:..:::.x..::::....:.x:...x::..:::.x.xxx.::...:.x.x...x.xx.x.:x........:......x...... 109M 64/109 58.7% 109/94230402 0.0% 0/109 0.0% 2143949 NA +3045 chr4 + 190214555 23176182 23176181 23176258 77 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAATAGTTTCAGTAGAAATGGTACCAGCTCTTCTTTGTACCTCTGGTA chr4 + 94230402 35558679 35558678 35558755 35558679 35558678 35558755 77 TTCTTTTTTCTTTTTTTTTTTTTAACTTAAAACAATGCCAGTGCAAACAGTGCCAGAAGTATTTTGTCTGTCTGCTA ..:......:.............xx:..::..:.:.x:....:x...::..:....xxx.x:.....x:x....x.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -12382497 -81847905 +3766 chr4 + 190214555 23199227 23199226 23199472 246 TGGCCTTTGGAT-TATATATATATATATATTTATATATATGTATATATATTTATATATTTATATATAT-TTATATATATATTTATATATATATTTATATATTTATATATATTTATATATATATTTATTTATATATTTATATATTTATTTATATATTTATAT-----ATTTATATATTTATATATATATTTATATATATTTTTTATTTTTATTTTTTGCAGATCAAAATAGCAGTACCCTTTTACATTTTTCTG chr4 + 94230402 45166695 45166694 45166942 45166695 45166694 45166942 248 TGGTCTCTGTAGATGTATGGATATAAAAATTAATATGTATGTTTGTACAACATTAAATTTTTA-ATATATCAAATTTGTAATTGTCACTGTTTCTATATTTCTTTGAGTAAATATCTTTTAATGCATCTGTATATTTATGATTTTATTTTTAAGTTTACCTCCCTGACTTTTAC-TTTGTAAAACTGTTGAAATA-GTTTCTCCCTCTCTCCTTTTGTAGAGCAAAGT--CATCACAGTGGTGTATTTTTGTG ...:..:..x.x-.:...:x.....x.x...x....:.....x.:..:.x:xx..x....x..-....-.:.x..x.:..x..:.xxx.:.x.:.....x.:.x.:x:..xx...x.x.xx..x:..:.:.........:xx.......x..x:....:x.-----.:..x..:-...:..x.xx.:..x.x...-:...:.:x:.:.:x::.....:...x....:.--..x:..xx.xx.::......x.. 12M1I50M1D4M1I92M5I8M1D20M1D32M2D23M 153/241 63.5% 248/94230402 0.0% 12/241 5.0% -21967468 -72262934 +3462 chr4 + 190214555 23199235 23199234 23199325 91 GGATTATATATATATATATATTTATATATATGTATATATATTTATATATTTATATATATTTATATATATATTTATATATATATTTATATAT chr4 + 94230402 81427526 81427525 81427616 81427526 81427525 81427616 91 GAATTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATAT .:.........:...x.::..x.::.x.xx.x.x.xx...:x......:...x.......:..::.:........:...xx..xx:..... 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% -58228291 -36002111 +3139 chr4 + 190214555 23199314 23199313 23199400 87 ATATTTATATATTTATATATATTTATATATATATTTATTTATATATTTATATATTTATTTATATATTTATATATTTATA-----TATTTATA chr4 + 94230402 22303518 22303517 22303607 22303518 22303517 22303607 90 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATA--CAGACATTTGTATGTACGCACAAATATATATAGTTGCTATTTATA ......x..x.x....:..::......:..xx.............--:.x.:....:.x.:..:::x:.x....x....-----........ 45M2D32M5I8M 63/85 74.1% 90/94230402 0.0% 7/85 8.2% 895796 NA +3002 chr4 + 190214555 23232514 23232513 23232567 54 TTTCTTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTTCTTTTCCT chr4 + 94230402 90927825 90927824 90927878 90927825 90927824 90927878 54 TTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCT ..:..:::.:x.......:.....:.:....xx..:..:..........:.... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -67695311 -26535091 +3392 chr4 + 190214555 23232530 23232529 23232605 76 TTCTTTTTCTTTTTCTTTTCTTTTCT---TTTTCTTTTCCTT---TCTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTG chr4 + 94230402 23976501 23976500 23976582 23976501 23976500 23976582 82 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCTG ........:x...x..:x.:.:x...---.........x..:---:x..................:....:.xx........ 26M3I13M3I37M 60/76 78.9% 82/94230402 0.0% 6/76 7.9% -743971 -93486431 +3063 chr4 + 190214555 23232543 23232542 23232603 61 TCTTTTCTTTTCTTTTTCTTTTCCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTC chr4 + 94230402 68448580 68448579 68448640 68448580 68448579 68448640 61 TCTTCTATTAATTTAAATTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTC ....:.x..xx:..xxx:..:....::.:.x.:.....................:...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -45216037 -49014365 +3228 chr4 + 190214555 23240620 23240619 23240702 83 CATAGTGGCATGAAGCTATAGTCTCAGCTACTCAGGAGGCTGAGGCAGGAAGACTGCTTGAGCCCAGGAGGTTGAGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--..x.xx.:....::........::::........x.xx.x::.x::.....:.....:..x..x:........ 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -52792577 -41437825 +3218 chr4 + 190214555 23241467 23241466 23241519 53 TTTTTTTTCTTTTTTTTTCCTTTTTTTTTCCTTTTTTTTTTTAAATAGAGATA chr4 + 94230402 29622885 29622884 29622937 29622885 29622884 29622937 53 TCTTTTTTCTCTTTTTTTCCCCTTTTTTTCGTTCTTTTTCTAGAATGAGGATA .:........:.........::........x..:.....:.x:...:::.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -6381418 -87848984 +3044 chr4 + 190214555 23249930 23249929 23249996 67 CTGGTTTGTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 51335330 51335329 51335396 51335330 51335329 51335396 67 CTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAAAA .......x..x.xx..:.:x..:.:.:...x......:.........::..:...::.:...::.:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -28085400 -66145002 +3037 chr4 + 190214555 23271442 23271441 23271490 49 TTCCGTTGTTTTTTTTTTTTTTTTTTTTTTGAGACACAGTCTTGCTTTG chr4 + 94230402 84397537 84397536 84397585 84397537 84397536 84397585 49 TTTCGTTGTTTTTGTTTTTTGTTTTTTTTTTAAACACAGTCATCCTATG ..:..........x......x.........x.:........x.x..x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -61126095 -33104307 +4104 chr4 + 190214555 23278557 23278556 23278678 122 AATAAGGAAAATGTGATATATATATGTATATATGT----GTGTATATATACACACATACATATATGTATACATATATACACATACATATATATCTGTGTATATATATATACATATATACATATGTG chr4 + 94230402 21109178 21109177 21109303 21109178 21109177 21109303 126 AATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..........x.xxxx....:..:...:.x.x...----..:.x.....::..x..:.:...:x:..:...x....:::.::...x:..::x...........:.:...:x....::.:::.:::. 35M4I87M 78/122 63.9% 126/94230402 0.0% 4/122 3.3% 2169379 NA +3182 chr4 + 190214555 23278596 23278595 23278716 121 ATATATACACACATACATATATGTATACATATATACACATACATATATATCTGTGTATATATATATACATATATACATATGTGTATATACATATGTATACATATATGTGTGTATATATACA chr4 + 94230402 76376858 76376857 76376971 76376858 76376857 76376971 114 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGA-------AAATGTGCCTCTCTGTGTGCTTGTTTACA ..::....x:x:x.......:::x.x.:.:..:..::......x.xx..::........:....:.:......x...x..:x:x.-------.x:.:.:.x.x.x......:x.:.x.... 85M7D29M 72/114 63.2% 114/94230402 0.0% 7/114 6.1% -53098262 -41132140 +3054 chr4 + 190214555 23278633 23278632 23278716 84 CATACATATATATCTGTGTATATATATATACATATATACATATGTGTATATACATATGTATACATATATGTGTGTATATATACA chr4 + 94230402 89812968 89812967 89813051 89812968 89812967 89813051 84 CATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATA ....:.x...x..x.........x..x..:.x.xx......:..::x.:x:x...::....::x:x.:.......:.:....:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -66534335 -27696067 +3140 chr4 + 190214555 23278652 23278651 23278724 73 ATATATATATACATATATACATATGTGTATATACATATGTATACATATATGTGTGTATATATACACACACATG chr4 + 94230402 22600200 22600199 22600272 22600200 22600199 22600272 73 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:....x:....::.x...:...::..:.x.x.........:x.:.:.....:...::..:...::.x:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 678452 NA +3227 chr4 + 190214555 23283188 23283187 23283257 70 CGCGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:......--...x......:.........:.::........x.xx.x...xx:.x.......:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -52750009 -41480393 +3046 chr4 + 190214555 23320199 23320198 23320251 53 CAGCCTGACTGCCTCTCAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAACTA chr4 + 94230402 22392437 22392436 22392489 22392437 22392436 22392489 53 CAGACTGGCTTCTATTTAAAAAAAACAAAACAAACAAACAAAAAAAAAAACCA ...x...:..x.:x:.:........x....x...x................:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 927762 NA +3023 chr4 + 190214555 23321533 23321532 23321595 63 TGCTTTTCTTTCTCTCTGTCTCTCTCTCCTCCTCTCTCTCTCTCTCCCTCCCTATTTTTCTCT chr4 + 94230402 4618340 4618339 4618402 4618340 4618339 4618402 63 TGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCT ..:..........:x:xx::.x......:................x...x:x:..x.x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 18703193 NA +3049 chr4 + 190214555 23338154 23338153 23338208 55 ACCAAAACTGAAGAAAAAAAAAAAGAAAAAAAGGGAATACATATTCAAGAATTGT chr4 + 94230402 10047693 10047692 10047747 10047693 10047692 10047747 55 ACTGAAACTTAAAAAAAAAAAAAAGAAGAAAAGGTAAAAAATATATGGGAACTGT ..::.....x..:..............:......x..x.x....x:::...:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 13290461 NA +3155 chr4 + 190214555 23352061 23352060 23352129 69 CATGGTGGTATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::.....--....x......:.........::::........x.xx.x...x::........::.:. 9M2D58M 49/67 73.1% 67/94230402 0.0% 2/67 3.0% -52681136 -41549266 +3289 chr4 + 190214555 23359386 23359385 23359444 59 TTTTTTCTTTTTTTTTCAAAAATTTAGAAAAAACCTTCAAGAGGACTACATTATCCACA chr4 + 94230402 79703663 79703662 79703721 79703663 79703662 79703721 59 TTTTTTTTTTTTTTATTAAAGGTTTAGAAAAAACCTGTTAGAGACCTGGATTATCTGCA ......:.......x.:...::..............x:x....:x..:x......::.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -56344277 -37886125 +3379 chr4 + 190214555 23373058 23373057 23373123 66 GTAATACTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGTGG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x.:.........::........x.xx.x...x.............:..x.xx:..:...:. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -52660154 -41570248 +3356 chr4 + 190214555 23395504 23395503 23395667 164 AAACCAACTTTTCATTTCATCAATCATTTGTATTGTTTTCTTCATTTCAATT--TAATTTGTTTCTGCTCT---GATCTCTATTATTTCTTTTCTTTTACTG-----ATCTTTGGTTTGGTTTGCCCTTTATTTTCTAGGTTTTTTTGTTGTTGTTTTTTGTTTTTTGTTTTTT chr4 + 94230402 18999117 18999116 18999285 18999117 18999116 18999285 169 AACCCAAATTTTCAATAAATAAAATGGCAGTGTTTTCTTTTACTTTCCGAATACTGTCTTTTTTGTGTTTCCAAGCTCTTCAATCTGTCTTTACGTTTACAGTAGGAATCTTCTCCATG-----CCTGCTTTTTTTTAGGGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTT ..x....x......x.xx..x..x::x:x..:..x.:..:.x.x..:.:.x.--.:x:..x...x..:.::---.x...::.x.x.x.....x.x.....x.-----.....:xx:x..-----..:x:.x....:....x...............x..:x......x...... 52M2I17M3I28M5I12M5D50M 106/159 66.7% 169/94230402 0.0% 15/159 9.4% 4396387 NA +3802 chr4 + 190214555 23395583 23395582 23395665 83 ATTTCTTTTCTTTTACTGAT-CTTTGGTTTGGTTTGCCCTTTATTTTCTAGGTTTTTTTGTTGTTGTTTTTTGTTT-TTTGTTTT chr4 + 94230402 49679051 49679050 49679135 49679051 49679050 49679135 85 ATCTTTATTTTCTTATTGTTGCTTTGATTTTATTGCCTTTTGTTTTTCAAGGTTTTTTAGTTGTTGTTTTTTGTTTGTTTGTTTT ..:.:.x..:.:...:..x.-.....:...x:..xx.::..xx.....x.........x.................-........ 20M1I55M1I8M 65/83 78.3% 85/94230402 0.0% 2/83 2.4% -26283468 -67946934 +3103 chr4 + 190214555 23395632 23395631 23395668 37 GGTTTTTTTGTTGTTGTTTTTTGTTTTTTGTTTTTTT chr4 + 94230402 76505868 76505867 76505904 76505868 76505867 76505904 37 GGTTTTGTTGCTGTTGTTTTTTGTTTTTTGTTTTTTT ......x...:.......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -53110236 -41120166 +3025 chr4 + 190214555 23395634 23395633 23395668 35 TTTTTTTGTTGTTGTTTTTTGTTTTTTGTTTTTTT chr4 + 94230402 77610508 77610507 77610542 77610508 77610507 77610542 35 TTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTT ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -54214874 -40015528 +3192 chr4 + 190214555 23421238 23421237 23421337 100 ATTGACAAGTTTCTTTGATTTATTTATTCACACAGTGTGTGTGTGTGTGTGTGGATGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCATGTGT chr4 + 94230402 79265486 79265485 79265578 79265486 79265485 79265578 93 ATTGATAGCTGTAGCTGTCCTATTCAGTCA-ACAGTGTGTGTGTGTGC------ATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .....:.:x.x.xx:..x::....:.x...-................:------..........x...:.:.:::.::::.....::.:...:x.::.:. 30M1D17M6D46M 62/93 66.7% 93/94230402 0.0% 7/93 7.5% -55844248 -38386154 +3538 chr4 + 190214555 23427730 23427729 23427799 70 CATAGTGGTGTGCACCTGTAGTCCAAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.......--...x......:.x.......:.::........x.xx.x...x..........::.:.. 10M2D58M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -52605467 -41624935 +3132 chr4 + 190214555 23474343 23474342 23474413 71 TGTTA--ATTCCAATTTCTTTTTTATTCTAATTTTTATTTTTCTTTGCTCTTATGTGGTTCAGAAAAAAATAT chr4 + 94230402 58963179 58963178 58963251 58963179 58963178 58963251 73 TGTTATTATTCCAATTTTGTTTTTATTTTTAGATTTATTTTTTTTACCTCTTTTGTGAACAACAACAAAATAT .....--..........:x........:.x.xx.........:..xx.....x....:x:x.x..x....... 5M2I66M 55/71 77.5% 73/94230402 0.0% 2/71 2.8% -35488836 -58741566 +3127 chr4 + 190214555 23497557 23497556 23497658 102 AGGAGGGAGGAGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAAGAGGAGGAGGAGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAATA chr4 + 94230402 77212000 77211999 77212101 77212000 77211999 77212101 102 AGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAGAGTTTACTGATGAGAATGAAAGACAAAAAGCAATGTGAAGCAAGTA ....::.:.:.:..::.x...::..:.....::..:....:.x:..:x.:.:......xxx:xx..x:..:.x.:...:x.::...x..x.x:...x..:.. 102M 60/102 58.8% 102/94230402 0.0% 0/102 0.0% -53714443 -40515959 +3043 chr4 + 190214555 23503188 23503187 23503281 94 CTTGTTACACTTTAGCAAACATCTGTGTCTTGAGCATGCTTTGTGGCATTTACTCCTACAATTGATTTTTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 40166659 40166658 40166752 40166659 40166658 40166752 94 CTAATTATACTTTGTTACACTTCAGAATTCTAAGCATGCAGCACTGTACCTACAGATGTAGCAGCCTTTTTTCTTTTCCTTTTTTTTTTTTCTT ..x:...:.....:x:.x..x..x.x:.::.:.......xx:::x.:.::...xxx.::.::x.x:...........::............:.. 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% -16663471 -77566931 +3079 chr4 + 190214555 23542759 23542758 23542843 85 TTCTTTACTAAAAATACAAAAAACAAACAAACAAACAAAAAAAAGAAAACAAAAATTAGCCTGGAGTGGTGGCACATACCTGTAA chr4 + 94230402 26160143 26160142 26160224 26160143 26160142 26160224 82 TTTCTTAATAACAGGAGAAGCAATAAACAAACAAACAAAAAAAAACAAATAAATACATGTTTGGAGTTACTGCA---GCCTGCAA ..::...x...x.:x.x..:x..:....................:x...:...x.:xx.::......x::x...---:....:.. 74M3D8M 57/82 69.5% 82/94230402 0.0% 3/82 3.7% -2617384 -91613018 +3046 chr4 + 190214555 23542776 23542775 23542812 37 AAAAAACAAACAAACAAACAAAAAAAAGAAAACAAAA chr4 + 94230402 24270325 24270324 24270361 24270325 24270324 24270361 37 AAAAAACAAACAAACAAACAAAAAGAAAAAAACAAGA ........................:..:.......:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -727549 -93502853 +3017 chr4 + 190214555 23552787 23552786 23552839 53 AAGTAATCTAATAGCCCTAAACACATTCACACACACACACACACACACACACA chr4 + 94230402 80695913 80695912 80695965 80695913 80695912 80695965 53 AAAAAATAAAATGGCTCTAAAACCATTAACACAAGCACACACACACACACACA ..:x...xx...:..:.....xx....x.....x:.................. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -57143126 -37087276 +3147 chr4 + 190214555 23564305 23564304 23564349 45 TTGTGGTTTTTTGTTGTTGTTGTTCTTCTTCTTTTTGTTTTTTGA chr4 + 94230402 18999247 18999246 18999291 18999247 18999246 18999291 45 TTAGGGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTTCTCTGA ..:x.......................:..:.....x..:.:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 4565058 NA +3080 chr4 + 190214555 23575383 23575382 23575440 58 CACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x......:.........:.::........x.xx.x...xx:.x.........:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -52457824 -41772578 +3784 chr4 + 190214555 23582002 23582001 23582137 136 AGAATAATAAGGCCACTAATCATTTGCAACCCCATGGCACCATTCATCAAGGGATCTCAGAGAACTTT----ACCTGAGTTAATTAATACTGGCAACGCCTCTGTGAACTAGATAAGTGTTATTATTCCCATTTTACAGA chr4 + 94230402 41768495 41768494 41768619 41768495 41768494 41768619 125 AAGATGATAATATTACTTAGCACTTACA--------GCGCTTTTCATC-------TTCAAAGCATTTTGCAAACATAAACTAATTAATCTTCCCAACACGTCTGTGAGGTGGGCAAGTGTTATTATACCTGTATTACAGA .::..:....x:::...x.x..:..:..--------..:.:x......-------:...:..x.:...----..x.:.::........x:.xx....:.x.......:x.:.::............x..::.x....... 28M8D12M7D13M4I68M 84/121 69.4% 125/94230402 0.0% 19/121 15.7% -18186493 -76043909 +3666 chr4 + 190214555 23582023 23582022 23582159 137 ATTTGCAACCCCATGGCACCATTCATCAAGGGATCTCAGAGAACTTTACCTG----AGTTAATTAATACTGGCAACGCCTCTGTGAACTAGATAAGTGTTATTATTCCCATTTTACAGATGAGGAGACTGAGTAATGGAGA chr4 + 94230402 28016101 28016100 28016241 28016101 28016100 28016241 141 ACTTCCATTTCTGTAGCATTTGCCATCTCTGGATCTCAAAGTGGATTATAAAGAATAGTGATTTAAACCTTCCTGCACCTCTAGGAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGA .:..x..x::.::.:...::xx:....xxx........:..x:xx...:xx:----...x.x....xx..xx.x:.:.....:x..:x...:....::x......................::..:.::.x.xx.::.... 52M4I85M 85/137 62.0% 141/94230402 0.0% 4/137 2.9% -4434078 -89796324 +3821 chr4 + 190214555 23585389 23585388 23585465 77 TAACTATTTGTGTACACATCCTTCTGTGTTTTTTTGTTGTTGTTGTTGTTGTTGCTGCTTTGGTTTT--GTGTTTTGTT chr4 + 94230402 24860760 24860759 24860838 24860760 24860759 24860838 79 TGGCTGTTTGTGTGCACATGTATCTGTGTTTTTTTTTTGTTGTTGTTGTTTTTTTAAATGTGCTTTTCCATGTTTTGTT .::..:.......:.....x:x.............x..............x..x:x:x.x..x....--:......... 67M2I10M 60/77 77.9% 79/94230402 0.0% 2/77 2.6% -1275371 -92955031 +3308 chr4 + 190214555 23594844 23594843 23594968 125 TGGAAAGTAGGTT---ACATGAATCCTAATCTCACTTATACATCTTACAAGCTATGTGACCTTGAACAATTTACTTAACATGTTTCTACTTCAATTTCCTCACCTGTAAAATGAGAATAAAAATAGTT chr4 + 94230402 79037064 79037063 79037188 79037064 79037063 79037188 125 TGGAGAATAGATTTTGGTATGGGGACTA---TAAATTTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATT ....:.:...:..---::...::xx...---.x.x..x..:x...x.......:.:.......:::x..x...:..x.:x.:.:.xx::.......:.::..xx.:.......x.:.x..x...::.. 13M3I12M3D97M 78/122 63.9% 125/94230402 0.0% 6/122 4.9% -55442220 -38788182 +3498 chr4 + 190214555 23594898 23594897 23594968 71 GACCTTGAACAATTTACTTAACATGTTTCTACTTCAATTTCCTCACCTGTAAAATGAGAATAAAAATAGTT chr4 + 94230402 83501141 83501140 83501211 83501141 83501140 83501211 71 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATT ...::..::...x.........x...x.x.:.:...:...:.:.............:::x.:.x.:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -59906243 -34324159 +3593 chr4 + 190214555 23602417 23602416 23602499 83 CATGGTGCTGCGTGCCTGTAGTTCCAGCTATTTGGGAGGCTGAGGCGGGAGGATCACCTGTGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x...::.--..............:...::........x.xx.x.:.x...:..x:.....:..x.:x:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -52430780 -41799622 +3010 chr4 + 190214555 23603560 23603559 23603626 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGATTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.::..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -52429651 -41800751 +3046 chr4 + 190214555 23638515 23638514 23638608 94 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACCATATATATACCACATATATATACATCATATA chr4 + 94230402 23247722 23247721 23247812 23247722 23247721 23247812 91 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATG---AATAAATATATATATGAAATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........x:x.x.x.xxx..:..:---x.:.x.......:..x.x... 70M3D21M 61/91 67.0% 91/94230402 0.0% 3/91 3.3% 390793 NA +3036 chr4 + 190214555 23638530 23638529 23638569 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 19229448 NA +3505 chr4 + 190214555 23652958 23652957 23653061 104 CCACTGTGTTAGTCAGGTTTGTTATATATATATGTGTGTATATATATGTATATAT--ATGTGTATGTGTGTATGTATATATATGTGTATGTATATGTATATATATG chr4 + 94230402 85834511 85834510 85834616 85834511 85834510 85834616 106 CCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...xx:...x:x.::.....x....x:..x.:...x...:.:.:.:...:.:...--....:x:::.:::......x...:....x....:.:.::..:.:.:... 55M2I49M 66/104 63.5% 106/94230402 0.0% 2/104 1.9% -62181553 -32048849 +3229 chr4 + 190214555 23652967 23652966 23653042 76 TAGTCAGGTTTGTTATATATATATGTGTGTATATATATGTATATATATGTGTATGTGTGTATGTATATATATGTGT chr4 + 94230402 76709579 76709578 76709654 76709579 76709578 76709654 76 TAGACCAGTGGGGTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...x.x:..xx.x.........:::.....x....:.x.:..x:.:....:.:...:.x.:...x.......x... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -53056612 -41173790 +3050 chr4 + 190214555 23652988 23652987 23653059 72 TATGTGTGTATATATATGTATATATATGTGTATGTGTGTATGTATATATATGTGTATGTATATGTATATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...:.:x::.:.:....:x:.x.....xx.......:.........:...::....:.:x...:.x:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -18096108 -76134294 +3013 chr4 + 190214555 23669432 23669431 23669473 42 TGAAGTAAGGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT chr4 + 94230402 27996701 27996700 27996742 27996701 27996700 27996742 42 TGAGGTGAGGTTTTTGTTTGTTTGTTTGTTTTTTTCTTTCTT ...:..:........................x...x...x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -4327269 -89903133 +3008 chr4 + 190214555 23701095 23701094 23701149 55 GAAGAAAAAAGAAAAAAAAAACAGCCTGGCTAGAACAGAATGGTAAGAAAAAAAA chr4 + 94230402 35687141 35687140 35687195 35687141 35687140 35687195 55 GAAAAAAAAAAAAAAAAAAAGTAGTCTAGTCAGAACAAAATTCTAAGTACAAAGA ...:......:.........::..:..:.::......:...xx....x.x...:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -11986046 -82244356 +3052 chr4 + 190214555 23715971 23715970 23716031 61 CCTTGAACTTGCCAAATAATGTAAAATCACAGTTTTCATCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 77909730 77909729 77909790 77909730 77909729 77909790 61 CCATCAACTTTTCAAAAAATATAGCATTATTGTCTCTCTCTCTCTTTTTTTTTTTTTCTTT ..x.x.....x:....x...:..:x..:.:x..:.::x...................:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -54193759 -40036643 +3100 chr4 + 190214555 23748182 23748181 23748231 50 TTTCTTCTATAAATATATATATATATATATATATACACACACACACACAC chr4 + 94230402 85078498 85078497 85078547 85078498 85078497 85078547 50 TTTTCACTCCTAATATATACAGATATCTATATATACACACACACACACAC ...::x..x:x........:.x....x....................... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -61330316 -32900086 +3250 chr4 + 190214555 23754609 23754608 23754700 92 TGTGAAAACTAAGGACTCTGTATAAATGCATATATATATGGGTATACATATACACACATAAATATATGCAT-ATATGTATATATACACATAAA chr4 + 94230402 52120875 52120874 52120967 52120875 52120874 52120967 93 TGTGAAAATTCAGGTCAGGTTAGTAGTGTAGTTATGTATGGGTATACACATACACACATGAGAATACACAGAAAAAATATGTATTAACATAGA ........:.x...x.xxxx..xx.:..:.xx...:............:..........:.:x...::..x-.x.x:...:...xx.....:. 71M1I21M 64/92 69.6% 93/94230402 0.0% 1/92 1.1% -28366266 -65864136 +3273 chr4 + 190214555 23754655 23754654 23754738 84 CATATACACACATAAATATATGCATATATGTATATATACACATAAATATATAAACATATATATTTATGTGTGTGTATATATATA chr4 + 94230402 22600181 22600180 22600264 22600181 22600180 22600264 84 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCA ..:.x.x.:x..x:..x.:.::.....x:::..::.x......:x...:.x...:..:.......:.......:...::..::. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 1154474 NA +3095 chr4 + 190214555 23754694 23754693 23754764 71 ACATAAATATATAAACATATATATTTATGTGTGTGTATATATATAGACACACATATATACACATATATATT chr4 + 94230402 78281271 78281270 78281341 78281271 78281270 78281341 71 ACAAAAGTATCTAAGGAAATGAGGTTATATGGGTGTATTAATACACACACACACATATATATATATAAATT ...x..:...x...:x.x..:x:x....:..x......xx...:.x.......:.....:.:.....x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -54526577 -39703825 +3072 chr4 + 190214555 23758614 23758613 23758696 83 TTTCTTAGAATCTGGCTCCAAGGCTTCCTTCCCTTTAAAAAAAAAAAAAAAAAAAAAGTCACGTGAACCAGAAAGTAGAATTT chr4 + 94230402 83746705 83746704 83746787 83746705 83746704 83746787 83 TTTTTTAAAGCTTGAAACAAAGCTTGTTTTTGCTTGAAAAAAAAAAAAAAAAAAGAAGATTTGTGTAAAATAAAGTAAAATCT ...:...:.:::..:xx.x...x:.x::..:x...x..................:...x:x:...x.xx.x......:...:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -59988091 -34242311 +3609 chr4 + 190214555 23771924 23771923 23772075 152 ACACCATGGTTTCCTGCTTCATTTTCAAGTGCCAAATG--AGGCATATGAAATTATTCTCTCTCTCTTTGTTTCTATCTCTGTCTCTTTCTCTTTGTTTCCATCTTTGTCTCTTTCCCTCTGTTCTCTCTTTCTTTCTTTCTCTGTCTCTCTGA chr4 + 94230402 83326889 83326888 83327030 83326889 83326888 83327030 142 ACACTATAGTTTACTGCTT--TTTTTGGGTGTAGAGTACAACCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAA-------CTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTC---CTTTCTGA ....:..:....x......--....:::...:x:.:.:--.xx..:..xxxx......x.:x...:.x.x......x.:.:x.:...........xx...x.-------....x.:.:.x::..:.:::x.::..........---..:..... 19M2D17M2I62M7D34M3D8M 94/140 67.1% 142/94230402 0.0% 14/140 10.0% -59554965 -34675437 +15969 chr4 + 190214555 23779361 23779360 23779739 379 TGTTGGAAATGAGTTAAT----GTAGTCACACTAT--GACACGCTATTTTTATTCCTTACCCAGATCAGCCATATTCTAACAATACATTTCAAAGTACTGCTGACGGAGGCTCCACCTGAAACCTGTTC--TCTCAGATAAGTATCTTCATCCCATTCATCGTTTCAAGAAAAATAAATAAATAAATCTTACAGCACGGCAGCATTTTCATCTGCTTTGGTTTCAGCCAGAGATAAACTGTTCCTGCTGCAAAG----TAATTAATATCAGTCGCCTGGAAAGCAGAAATTGGGAGACAACAGGCTCCTCTTTCTTGATAAACAGATTG-TTGGGTAAGGTATGCACATGGATGTGACAATTCATTTGGCCATAGAAATAGCAGAAATGAGA chr4 + 94230402 76714561 76714560 76714942 76714561 76714560 76714942 382 TGCTGGAAAGAAGTTAATAAATGCAGTCACAATACAAGGTATACCATTCTCATTCCTTATTGATACCAACTATACTGTGACAATGAATTTCAAAGTACTGCTGATGTAAACTCTACCTGAAGCCTGTTTGATCTCAGATAAGCATCTTCATCCCATTCTTCATTTCAAGAA--------AAGAAAATCTTACTGCACAGTAACATATTCATTCGCTTTGGGTTCAGTTCAAGATAAGCCATGCTT--TGCAGAAAACCTAATTAATATCAATCACAGGGAAAACAGGAATTGGAAGGAAATGTGCTTTCATTTCTTGATAAACAGATCACCCATGATACATACACAAATGGACATACCAATCTGCTTTATTATGGAGGTAACAGAAAAGAAA ..:......x:.......----.:.......x..:--.::.::.:...:.:........::x.x.:..:.:...:.x.:.....:x..................:.x.::...:.......:......:--...........:...............x..:.........--------..:x.........x....:.:.:...x.....::.......x.....::x:......:.::.x.:.--....:.:----............:..:.xx.....:...:......:..:x..::x...:::x.................::-:::x.xx.x:..::..x.....::.:x....::::..x:::..:..::..:......x..:. 18M4I13M2I92M2I40M8D66M2D7M4I71M1I62M 266/369 72.1% 382/94230402 0.0% 23/369 6.2% -52935200 -41295202 +3177 chr4 + 190214555 23795024 23795023 23795086 63 TTCCATGGCAAAAGGAAAAAGAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGAT chr4 + 94230402 75300437 75300436 75300499 75300437 75300436 75300499 63 TTCTGAGATAAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTAT ...::x.::...x..:.xx.:..........:.:.:.................:.xx...x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -51505413 -42724989 +3045 chr4 + 190214555 23795037 23795036 23795117 81 GGAAAAAGAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGATATTAGTTCTATGGAACCTGTGGTTTCTTCAG chr4 + 94230402 8147803 8147802 8147883 8147803 8147802 8147883 81 GGAGAGAAAAAAAAAAAAAAAAAAGAGAAAGATATTAAGGTGTACAGCATGTTCGTACCCTGTAGGCTGTAATTTTTACAG ...:.:.:..........:.:.:.....:...x.xx:..:x:x....x..:..x..x.:x..x.:x....::...:.x... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 15647234 NA +3274 chr4 + 190214555 23800770 23800769 23800874 105 CCTTGAGTCTGTAC--AGCTTTTATAACAGGAAAAATTAAT---ATTATGTATGCTTCAGTTTCCTTATCTGTAAAATGGGGATGATAGTAATAATATACACCTCCTAGG chr4 + 94230402 83501124 83501123 83501225 83501124 83501123 83501225 102 CCTGGATTCTGTACCCAGACTCT------GGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAAT--TACCTACCTCACAGG ...x..x.......--..x:.:.------..:x......x.---x:.:.:.:...:.......:.::.:...........:.x..........--..:x:.....x:... 14M2I7M6D12M3I49M2D15M 72/97 74.2% 102/94230402 0.0% 13/97 13.4% -59700354 -34530048 +3252 chr4 + 190214555 23834306 23834305 23834349 44 AACATATATATATACACACACACATATATATAAATTAGCTGGGT chr4 + 94230402 67665831 67665830 67665874 67665831 67665830 67665874 44 AATATATACATACACACACACACATATATATAAATTAACTTAGT ..:.....:...:........................:..x:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -43831525 -50398877 +3570 chr4 + 190214555 23860143 23860142 23860223 81 GCACCTGTAGTCCTAGCTATATGGAAGGCTGAGATGGGAGGACTGCTTGAGCCCAGGAGTTTGAGGCTGCAGTAAGCAATG chr4 + 94230402 76033206 76033205 76033286 76033206 76033205 76033286 81 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ....x......:.:.....:x..:.........x:xx.x.:.x::.....:.....:..:..x:.....:..x.x:::... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -52173063 -42057339 +3134 chr4 + 190214555 23895937 23895936 23896003 67 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACATAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x.................:.xx:...:x.::.:::.:....x...:..:.x:.::....:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -61938604 -32291798 +3222 chr4 + 190214555 23895937 23895936 23896009 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACATATTTATAT chr4 + 94230402 85834543 85834542 85834615 85834543 85834542 85834615 73 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.................:.xx:...:x.::.:::.:...:x...:..:.x..::........:x:.:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -61938606 -32291796 +3319 chr4 + 190214555 23910179 23910178 23910256 78 AATATATATAAAATATATAAAAATTTATACATATATAATATATAATATATTATATATAATATATATAAATATATATTA chr4 + 94230402 36606093 36606092 36606170 36606093 36606092 36606170 78 AATGTATATTTTATATCAAATAATTTACATGTATATAATATATAGAGTGTATTATATTAAAAATGTGAACATATATTA ...:.....xxx....xx..x......:.::.............:x:.:.xx.....x.x.x..:.:..:........ 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% -12695914 -81534488 +3036 chr4 + 190214555 23928751 23928750 23928815 65 CACAAAAAAACAAAAAAAACAAAAAAAAACAACAAAAAAAAAAACCCAAGATCATATCTTTTGTA chr4 + 94230402 58075159 58075158 58075223 58075159 58075158 58075223 65 CACAGAGTAACCAAAATGAAAAAAAAAAAAAATACAAAAAAAAACCCCAAAACAGATGTTCTATA ....:.:x...x....x:.x.........x..:.x............x.:.x..x..x..:.:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -34146408 -60083994 +3795 chr4 + 190214555 23976934 23976933 23977083 150 AACAGAAAGGA-----AGAAGAAGGAAGAAGAGGAAAAGGAAAAGGAAGAAGGAGGAGGAAGAGGGAGAGGAGAAGGAAAAGAGAGAGGAGGAGGAAAAGGAGAACAAGAAGGAGAAGAGGAAGAGGAAGAAGAAGAAGAAAGAAGAAGAAGAAG chr4 + 94230402 14751851 14751850 14752002 14751851 14751850 14752002 152 AATATAAAGGAGATCTAACAGAAGAAATAAATTGA---GGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAG ..:.x......-----.:x.....:..x..:xx..---..x.:x..::...:....x...::..x.x..::.x..::x.x.:..:x..:..:..:.::....xx.x..::.:.:.:...x...:..x....:x..:.xx..:.:...x:..:... 11M5I19M3D117M 91/147 61.9% 152/94230402 0.0% 8/147 5.4% 9225083 NA +3127 chr4 + 190214555 23976976 23976975 23977070 95 AGAAGGAGGAGGAAGAGGGAGAGGAGAAGGAAAAGAGAGAGGAGGAGGAAAAGGAGAACAAGAAGG---AGAAGAGGAAGAGGAAGAAGAAGAAGAAA chr4 + 94230402 55453379 55453378 55453476 55453379 55453378 55453476 98 AGTGGGTAGAGGATGCTTGCAAGGTAGAGAGAATCAGAAAAGAGGAGGAAAAGGAAGATAAATAAGTAAGGAAAAGGAAGAGAAATAAGCTAAAAAAA ..x:..x:.....x.xxx.x:...x::..::..xx...:.:..............::.:..:x.:.---:...:........:..x...xx:..:... 66M3I29M 62/95 65.3% 98/94230402 0.0% 3/95 3.2% -31476403 -62753999 +3102 chr4 + 190214555 23977037 23977036 23977110 74 GAAGGAGAAGAGGAAGAGGAAGAAGAAGAAGAAAGAAGAAGAAGAAGACTTGCAGAAGGGAAAAAGAGATGGAG chr4 + 94230402 17079140 17079139 17079213 17079140 17079139 17079213 74 GGAGAGGTGAAGGTAGAGCTGGGAGAAGAGGCTGGGGAAAAAGGAGAACCTGCAGAAAGGAGAGAGAGATGAAG .:..::.x::...x....xx:.:......:.xx:.:::..:.:..::..:.......:...:.:.......:.. 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 6897897 NA +3349 chr4 + 190214555 23984699 23984698 23984842 144 TCAGATTCTCTCA-ACATCTTCAAGTAGATGAGATTAGGGATTTTTATCCCCATTTTACAGATGAGGGAACTGAAGTGCAGAGAGTAGGAATGATTTTCCTAAAGCCATACAGTAAGTTGGTAGCAGAACAAGAACCGAAATCCA chr4 + 94230402 87319896 87319895 87320021 87319896 87319895 87320021 126 TCAGACTTTGTCAGATCACTTCAGCTCTGCAAACTGAGGGCATTTAAGCACCATT---------AAGGAACTGG----------GTCAGAATGATTCTCCTAAAGTCATACACAAAGTCTGTAGTAGTATGAGGAATTAAATCCA .....:.:.x...-.:xx.....:x.xx:::.:x.x....xx...x.x.x.....---------.:.......:----------..x:........:........:......xx....:x....:..x.::..:.x:x....... 13M1I41M9D10M10D61M 86/125 68.8% 126/94230402 0.0% 20/125 16.0% -63335197 -30895205 +3749 chr4 + 190214555 23988749 23988748 23989017 269 TATATATATATACACACACACATAAATCTATGCACACTTAGAGGTCAAGGAAATAGTAT--ACTATTATACATATATTTTAAATAGCATTATATATTACTATGTATTTTTTATATAATATTTATACATATAATAGTATAATACAGATTTATATAAATAGATATTATTATATAATATATACTATATTATATATAATATATAAAATATATACTATATGTAATATATACTATACATATAGTATACATACACTATTATAT--------ATATACATATAATAG chr4 + 94230402 26320097 26320096 26320345 26320097 26320096 26320345 249 TGTATCTATCTGCACATAGGCACAGACCTATA---------AAAGCAGGGAACTTGTGTCCACAATCATCACTGAGTCTGAGGCATTGTTCTGTAATGTAGTGTGTCATTAATAAAATATTTTCTTATATG---------------------TATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAG .:...x...x.:....:.x:..:.:.:....:---------.::x..:....x.x..:.--..x..:..xxx.:x:.:.x.:::.x::..x.:..x.::x:...:.:x..x...x.......x:x:....:---------------------..xx:.:..:..:x...x....xx::x:x.xx....x.xxx..:....x.x..:...:.....:..x.......x...:..x..x...::..x:.x..x.....--------x.:..:..:...... 32M9D18M2I70M21D104M8I15M 146/239 61.1% 249/94230402 0.0% 40/239 16.7% -2331348 -91899054 +3070 chr4 + 190214555 24049256 24049255 24049349 94 GTATATAAATACATATATATACACATATATATGTGTGTATATATATATGTGTGTATATATATATATATGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812967 89812966 89813060 89812967 89812966 89813060 94 GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:.....:...x....:.:..:.:x..x..::x.xx:..:..:.::.x::x:x:..:::...:.x:x...................:.x..x.. 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% -65763711 -28466691 +3041 chr4 + 190214555 24051048 24051047 24051117 70 CATGGTGGCGGGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGTCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x::.--.:....:...........::........:.xx.x...xx:.x.........:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -51982149 -42248253 +3737 chr4 + 190214555 24058805 24058804 24058887 83 CGTGGTGGTGCACACCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--....:.:.........x.::........x.xx.x...x.:..............x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -51974392 -42256010 +3461 chr4 + 190214555 24066784 24066783 24066884 101 CTATCTTTGCCATGACATCTATAGACTTCCATGGTTTTTTTGTTTTTGTTTTT-----TGTTTGTTTTGGGTTTTTTTTTTTTTTTTTTTTTTGCCTTTAGATATT chr4 + 94230402 75055457 75055456 75055559 75055457 75055456 75055559 103 CTATCTTTTTCA--AC-TTTGTAAAGGTCTGAGGTTCTTTTTTTCTGGCTCTTAATCTTATTTGATTTGGGTTTGTTTTTTGTTTTTTTTTTCCTCTTTAAGAATT ........x:..--..-.:.:..:.xx..::x....:....x..:.x.:.:..-----.:....x.........x......x..........:x:.....::x... 12M2D2M1D36M5I48M 72/98 73.5% 103/94230402 0.0% 8/98 8.2% -50988673 -43241729 +3016 chr4 + 190214555 24066826 24066825 24066868 43 TTTTTGTTTTTTGTTTGTTTTGGGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 30617007 30617006 30617049 30617007 30617006 30617049 43 TTTTTGTTTTGCTTTTGGTTTGGGTTTTTTGTTTTTTTTTTTT ..........x:x....x............x............ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -6550181 -87680221 +3371 chr4 + 190214555 24088224 24088223 24088297 74 GTACACCTGTAGTCCCAACTACTCAGGAGGCTGAAGTGGGAGGATCACTTGAGCCCAGGAGGTAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x......:...:.....::::.......:x:xx.x.:.x.......:.....:..x.xx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -51944980 -42285422 +3481 chr4 + 190214555 24108594 24108593 24108657 64 CACAGCTCTCT---GCAGGAGGAATCATTATCCTCATTCTGCAGATGAGGAAATTGAGGCCCAGAAA chr4 + 94230402 91240190 91240189 91240256 91240190 91240189 91240256 67 CACAGTCTTCTTGTGGAGTAGGAATTATTGCCATCATTCTGCAGATGGGGAAGCTGAGGTACAGAAA .....:::...---.x..x......:...::.x..............:....::.....:x...... 11M3I53M 50/64 78.1% 67/94230402 0.0% 3/64 4.7% -67131596 -27098806 +3258 chr4 + 190214555 24116975 24116974 24117046 72 TTTAAAAACAAAAAACAACAACCACAACAACAACAAAAAACAATGAACAAAAGCATGCACAGTGAAGTTGGT chr4 + 94230402 23689328 23689327 23689399 23689328 23689327 23689399 72 TCTAGATAAGAAAAAAAGAAACAACAACAACAACAAAAAACAACCAACAAACAGATTCAAAATGAAACTTGT .:..:.x.x:.....x.:x...x....................:x......x:x..x..x.:....::.x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 427647 NA +3356 chr4 + 190214555 24122353 24122352 24122428 76 CTGTGAGTGTATGCGTATGTGTGTGTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATATATATAT chr4 + 94230402 27325481 27325480 27325556 27325481 27325480 27325556 76 CTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...x...x:x.........xx...:..::.x.:x::x.:x:.:...........:........:.::..:...... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -3203128 -91027274 +3217 chr4 + 190214555 24122430 24122429 24122480 51 TATATATAGAGAGAGAGAGAGAGAGAGAGAGATCTATATAAATTTTGCTTC chr4 + 94230402 70089079 70089078 70089129 70089079 70089078 70089129 51 TATATATAGAGAGAGACAGAGAGAGAGAGATATTAATATATTTTTTAGTTC ................x.............x..:x.....xx....:x... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% -45966649 -48263753 +3148 chr4 + 190214555 24128536 24128535 24128598 63 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCGC------ATCTGTGTACA chr4 + 94230402 79265519 79265518 79265587 79265519 79265518 79265587 69 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA .............::........xx...:.:.:::.::::........:...------..:.....x.. 52M6I11M 47/63 74.6% 69/94230402 0.0% 6/63 9.5% -55136983 -39093419 +3048 chr4 + 190214555 24145078 24145077 24145136 59 AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACATATGCATATATATGCAT chr4 + 94230402 79265518 79265517 79265576 79265518 79265517 79265576 59 AGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACAT ..............::........xx...:.:.::.:.:..:.:....:.:::.x:... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% -55120440 -39109962 +3193 chr4 + 190214555 24145095 24145094 24145138 44 GTGTGTGTGTGTGTGTGTACATACATATGCATATATATGCATGC chr4 + 94230402 68837095 68837094 68837138 68837095 68837094 68837138 44 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGC .....:...............:...x..:....:...::..... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -44692000 -49538402 +3670 chr4 + 190214555 24147813 24147812 24147913 101 GTGCACCTGTAGTCCCAGCTACATGGGAGGCTGAGGCACAAGAATCACTTGAGCCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAAGCCACTGCATTCC chr4 + 94230402 76033204 76033203 76033303 76033204 76033203 76033303 100 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCC ......x......:........x..::........x.x::x...x.......:...:.:..x:xx:..:..:..-:.xx...x::.....x:x..::.x.. 74M1D26M 67/100 67.0% 100/94230402 0.0% 1/100 1.0% -51885391 -42345011 +3244 chr4 + 190214555 24147922 24147921 24147968 47 CTACAGAGTGAGACTCCATCTAAAAACAAACAAACAAACAAAAAAAA chr4 + 94230402 64786761 64786760 64786807 64786761 64786760 64786807 47 CTGTAGACTGTGACCCCAATTAAAAACAAACAAACAAACAAAAAAAA ..::...x..x...:...x:........................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -40638839 -53591563 +3262 chr4 + 190214555 24155470 24155469 24155543 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCATGAGGATTGCTTAAGCCCTGGTAATCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.x..x.:.x::...:.:...x.:x:x.:x:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -51877734 -42352668 +3302 chr4 + 190214555 24156672 24156671 24156759 88 CTTTATCATTCTAAA-TACCAAAGATTAAGCTTG----CCTCTTGGC-----TGTTGCGGTCTTTTCTCTCTCTCTTTTTTTTTTTTTTTTAACTTTT chr4 + 94230402 18684671 18684670 18684768 18684671 18684670 18684768 98 CTGTATCATTAGAAGGTAATCAAAATGGAGCTTAAAATTCTACTGGCACATATGTTGCCATCCTTCCTCTCTCTCTCTTTTTTTTTTTTTTAATCTCT ..x.......xx..:-..x:x..:..x:.....:----:..x:....-----......x:..:..:..........:................::.:. 15M1I18M4I9M5I46M 66/88 75.0% 98/94230402 0.0% 10/88 11.4% 5472001 NA +3549 chr4 + 190214555 24171266 24171265 24171348 83 CATGGTGGTGCGTACCTGTACTCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x....x.:...........::...:....x.xx.x...x.x...........:..x:xx:..:..:.. 11M2D70M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -51861931 -42368471 +3443 chr4 + 190214555 24191624 24191623 24191698 75 AGAGAACTCTCCAGCCTGAGTTATGGAGCTTTAAAAAAAGAAAAAAAAGAAGGAAAAGGA-----GAAAGGCAAAAAGTA chr4 + 94230402 49065962 49065961 49066041 49065962 49065961 49066041 80 AAAAAAACCTACAGCATGAGTAGTGGAGCTTTAAAAAAGAAGAAAAAAACAGGGAAAAAATATTTGAGAAGGAAAAAATA .:.:..x:..x....x.....x:...............::.:......:x...:...::.-----..:.:.x.....:.. 60M5I15M 55/75 73.3% 80/94230402 0.0% 5/75 6.7% -24874338 -69356064 +3159 chr4 + 190214555 24200372 24200371 24200453 82 ATGGTGGTGGACACCGGTAATCCCAGCTATTTGGGAGGTTGAGGCAAGAGAATCACCTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::......--...xx...:.:.......:...::...:....x.xx.x...x...:...:.....:..x:xx:..:..:.. 9M2D71M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% -51832826 -42397576 +3093 chr4 + 190214555 24206761 24206760 24206876 116 ACCTGGGAGGTGGAGGCTGCAGTGAGCCAAGATTGCAACCACTGCATTCCAGTCTGGGTGACGGAGAAAGACTTCACCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 32176630 32176629 32176745 32176630 32176629 32176745 116 ACCAGGGGAACAGCAGATGCCCTGCACCATGCCTGTAAACACGAGGCCACCCCCTATGTGACAGAACAGAACATGGCTTTGATAAGAAAATGCAGGGAAAAAAAAAAAAAAAAAAG ...x...:::::.x:.x...xx..x:...x.x:..:..x...x:x:::x.xx:..:x.....:..:x.::..x.x:.:..:.x..:....x:x.:::................... 116M 68/116 58.6% 116/94230402 0.0% 0/116 0.0% -7969869 -86260533 +3310 chr4 + 190214555 24208152 24208151 24208225 74 GTGCACCTGTAGTCCCAGCTACTAGGGAGGTTGAGATGGGAGGAGCATATGAGCCTTGGAGTGTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::...:....x:xx.x.:....:x...:..:x.:..:x.x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -51825052 -42405350 +3491 chr4 + 190214555 24217667 24217666 24217779 113 GTGGTGCACACCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGCGGCAGAGGTTGCAG----TGA-GCCAAGA----GTGTGCC-----CCTGCACTCCAGCCTGG chr4 + 94230402 76033201 76033200 76033324 76033201 76033200 76033324 124 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGG .........:--......:........:::::........x.xx.x...x.......:.....:x.x:xx:..:..:..----...-......x----.......-----.....x.-.....x... 10M2D67M4I3M1I7M4I7M5I7M1D9M 85/110 77.3% 124/94230402 0.0% 17/110 15.5% -51815534 -42414868 +3061 chr4 + 190214555 24225531 24225530 24225586 56 AAAAAAAAACACACACACACACAAAAACAAAACAAAATAAAAAA----AAAAAAGAGTGA chr4 + 94230402 58764814 58764813 58764873 58764814 58764813 58764873 60 AACAAAACACACACACACACACAAAAAAAAAACAAATCAAAGAACTGCAAACAAGCATGA ..x....x...................x........x:...:..----...x...x:... 44M4I12M 47/56 83.9% 60/94230402 0.0% 4/56 7.1% -34539283 -59691119 +3021 chr4 + 190214555 24256062 24256061 24256118 57 AAGTAGATGCTATTATTTCCATTTTACAGATGAAGAAAGTAAGATTCAGAGAAGGTT chr4 + 94230402 28016190 28016189 28016246 28016190 28016189 28016246 57 AGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTT .:...::::x.......:..............:.....x::x...x......:.x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -3760128 -90470274 +3094 chr4 + 190214555 24270252 24270251 24270359 108 TTGGGACTTCTCAGCCTTGACAATCACATAAGTCAATCCCTTATAATAAATCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTATG chr4 + 94230402 26578214 26578213 26578319 26578214 26578213 26578319 106 TTCAGACTCCTCACCTTCAAAGCTCA-GTAGGGCTTTGCTCT-TGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ..x:....:....x.:.::.x:x...-:..:.x.xx.x.::.-.:::..x::..::...................:.:.:.:.x.xx..:...:...x...::..:.. 26M1D15M1D65M 67/106 63.2% 106/94230402 0.0% 2/106 1.9% -2307962 -91922440 +3153 chr4 + 190214555 24270310 24270309 24270366 57 TCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTAA chr4 + 94230402 26578266 26578265 26578322 26578266 26578265 26578322 57 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAA .:...................:.:.x.x.x.xx..:...:...x....:.....x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -2307956 -91922446 +3491 chr4 + 190214555 24284888 24284887 24284970 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGTTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x.::..........:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -51748309 -42482093 +3266 chr4 + 190214555 24289080 24289079 24289149 70 CGTAGTGGTGTCTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.......:x:.--....:.:...........::........x.xx:x...x.:.........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -51744117 -42486285 +3131 chr4 + 190214555 24289193 24289192 24289280 88 CTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAA------AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAGTTAGCTGTTCAAAGC chr4 + 94230402 70588080 70588079 70588172 70588080 70588079 70588172 93 CTGTGCTCCAGAATCAGCATCAGTGTGAAGAAAAGGCTTTATAGGTTAAAAAAAAAAGAGAGAGAGAGAGAAGGAAAAATCACTTG-TCAAGGC ...x.:xx....:.x..xx..x..x.x..:....------.x.::xx..........................:....:.:.x:..-....:.. 34M6I46M1D7M 64/87 73.6% 93/94230402 0.0% 7/87 8.0% -46298887 -47931515 +3126 chr4 + 190214555 24289224 24289223 24289258 35 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAA chr4 + 94230402 75300456 75300455 75300490 75300456 75300455 75300490 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA ..................:................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -51011232 -43219170 +3095 chr4 + 190214555 24289226 24289225 24289261 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ................................::.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -51011230 -43219172 +3204 chr4 + 190214555 24289230 24289229 24289266 37 AAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAGT chr4 + 94230402 7875213 7875212 7875249 7875213 7875212 7875249 37 AAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAGGT ...............................:..:.. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 16414017 NA +4072 chr4 + 190214555 24295989 24295988 24296097 109 TATATATGTGTATGTATGTGTGTATATATATGTATATGTGTGTATATATGTGTATGTGTGTATGTGTATATATGTGTATATGTATATATGTACATATATACACACATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....:......:.x.x....x.::...x...:.:..:x::::....:x:.....:x.:.:::.:....:x:...:x.x.:.......:....::x....:..::..:.. 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 3186795 NA +3594 chr4 + 190214555 24295992 24295991 24296085 94 ATATGTGTATGTATGTGTGTATATATATGTATATGTGTGTATATATGTGTATGTGTGTATGTGTATATATGTGTATATGTATATATGTACATAT chr4 + 94230402 5214228 5214227 5214321 5214228 5214227 5214321 94 ATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..x:....:..::::x....x.::.:.:::..x.::......::..x..:........::.::x.::.:.....::...:.x..:...:..:.. 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 19081764 NA +3085 chr4 + 190214555 24296045 24296044 24296112 68 TGTGTATGTGTATATATGTGTATATGTATATATGTACATATATACACACATACATATATATGTACATA chr4 + 94230402 6200763 6200762 6200830 6200763 6200762 6200830 68 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCTGTCCACA .:.x.x....:............x.:.:...:.x.:::...x.x........x.....xx...x..:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 18095282 NA +3212 chr4 + 190214555 24296188 24296187 24296248 61 TGTATGTGTGTGTGTGTATATATATATATATTTATAT-ATATATAGGGTATCCAGTTGAATT chr4 + 94230402 85548437 85548436 85548497 85548437 85548436 85548497 61 TATATGTATGTGTGTGCATACATATATATATTTATATCAGACAT-GGATATCCATTTTAGTT .:.....:........:...:................-.x.:..-..:......x..x.:.. 37M1I6M1D17M 50/60 83.3% 61/94230402 0.0% 2/60 3.3% -61252249 -32978153 +3216 chr4 + 190214555 24300268 24300267 24300363 96 TGCTTTTATGGGTTTTTTTTCCTCCTTTAAGCAATGGTATTTTTC--TATACAATAGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 36195246 36195245 36195328 36195246 36195245 36195328 83 TGTTTATATTGACTTTCCTTC---------------GTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTT ..:..x...x.::...::...---------------..:......--:x.x............:...:..x.....:.......::...x...x.... 21M15D9M2I51M 62/81 76.5% 83/94230402 0.0% 17/81 21.0% -11894978 -82335424 +3296 chr4 + 190214555 24300280 24300279 24300381 102 TTTTTTTTCCTCCTTTAAGCAATG-----GTATTTTTCTATACAATAGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTAAGTTAAAAA chr4 + 94230402 72938502 72938501 72938603 72938502 72938501 72938603 102 TTTTATTCCCACCTCCAAGGAATGTGAAGGTATATA-----GTGATAATATGCTCGGTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTGCATAAATCAAAGA ....x..:..x...::...x....-----....x.x-----:::...::..x:.:xx..x.......x....x....x......x..........x...:.:...:. 24M5I7M5D66M 70/97 72.2% 102/94230402 0.0% 10/97 10.3% -48638222 -45592180 +3577 chr4 + 190214555 24305092 24305091 24305200 109 TTTGGGGCACTGTAAAACAGAATACATACATATATGTGTATGTATA-----TATATATATATACATACACACA--TATATATGTGTGTGTGTGTGTATATT---TATATACTCCCAAAG chr4 + 94230402 32744931 32744930 32745049 32744931 32744930 32745049 119 TTTGTTGCAGCCCACAACAATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATATTCTGTAGATGCAACCAAGG ....xx...x:x:.x....:x:....:x:..x...x.:..::.x..-----....x...:.............--.:.::........:...:........---..x..:.xx....:. 46M5I22M2I26M3I15M 78/109 71.6% 119/94230402 0.0% 10/109 9.2% -8439839 -85790563 +3032 chr4 + 190214555 24305120 24305119 24305158 39 CATATATGTGTATGTATATATATATATATACATACACAC chr4 + 94230402 28919109 28919108 28919147 28919109 28919108 28919147 39 CATATATATGTGTGTATATATAAATATATGCATACACAC .......:...:..........x......:......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -4613989 -89616413 +3009 chr4 + 190214555 24317568 24317567 24317608 41 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCACCACCAA chr4 + 94230402 33030039 33030038 33030079 33030039 33030038 33030079 41 AAAAAGTAAAAAAGAAAAAAAAAGAAAACCACCACCACCAA .....:x......:.........:....x............ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -8712471 -85517931 +3059 chr4 + 190214555 24332100 24332099 24332169 70 AGAACAGTGGGTTTTTTTTTGTTTTTGTTATTGTTTTGTTTTGTTTTC-------ATTTTTCTTTTATAGAGACAGG chr4 + 94230402 60657963 60657962 60658039 60657963 60657962 60658039 77 AGACAAACGGGTTTTTTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTTCAAAAATAATTTTGTTACCATATAGTTAGG ...xx.::..........xxx........x..................-------.....x:.x::...x..x:... 48M7I22M 54/70 77.1% 77/94230402 0.0% 7/70 10.0% -36325863 -57904539 +3001 chr4 + 190214555 24333916 24333915 24333970 55 AGAGGAAGACTCCAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAAGGCAC chr4 + 94230402 92559668 92559667 92559722 92559668 92559667 92559722 55 AGAGGATGACAACAACAACAATTAAAGAAAAAAAAAAAGAAAGAAAAAAGCCCAC ......x...xx.........:x.x.:...........:...:......:xx... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -68225752 -26004650 +4037 chr4 + 190214555 24339185 24339184 24339267 83 TTCATCCATGTGTGT--GTGTGTGTGTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACACAT chr4 + 94230402 85834531 85834530 85834615 85834531 85834530 85834615 85 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:..:...x.....--..............:...xx..:..x::...:....:..x.:...:::x:.::......:........ 15M2I68M 61/83 73.5% 85/94230402 0.0% 2/83 2.4% -61495346 -32735056 +4204 chr4 + 190214555 24339185 24339184 24339264 80 TTCATCCATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 + 94230402 85834535 85834534 85834614 85834535 85834534 85834614 80 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....:::...x...................xx..:..x::...:....:..x.:...:::x:.::......:....... 80M 58/80 72.5% 80/94230402 0.0% 0/80 0.0% -61495350 -32735052 +3308 chr4 + 190214555 24339186 24339185 24339250 65 TCATCCATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACACACACACA chr4 + 94230402 79265513 79265512 79265577 79265513 79265512 79265577 65 TCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA ...x.x:............::.......:xx.:......:...:.::.:.::....:..x...:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -54926327 -39304075 +3003 chr4 + 190214555 24339193 24339192 24339248 56 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACACACACA chr4 + 94230402 79265522 79265521 79265577 79265522 79265521 79265577 56 TGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA ..........::........xx.:......:...:.::.:.::.:..:..x...:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% -54926329 -39304073 +3255 chr4 + 190214555 24339196 24339195 24339244 49 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACACA chr4 + 94230402 68837095 68837094 68837143 68837095 68837094 68837143 49 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:.............:.:.:.x...:...:...:.:..:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -44497899 -49732503 +3110 chr4 + 190214555 24339201 24339200 24339266 66 TGTGTGTGTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 + 94230402 85834547 85834546 85834612 85834547 85834546 85834612 66 TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .............:.:...xx..:..x::...:....::.x.:...:::x:.::......:..... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -61495346 -32735056 +3183 chr4 + 190214555 24339203 24339202 24339254 52 TGTGTGTGTGTATATATATATATATATATATATATACACACACACACACACA chr4 + 94230402 23247723 23247722 23247774 23247723 23247722 23247774 52 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .......:..:.:.:.:..x...:x.:....:..:.....:........... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 1091480 NA +3183 chr4 + 190214555 24339205 24339204 24339256 52 TGTGTGTGTATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247723 23247722 23247774 23247723 23247722 23247774 52 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .......:.::.:.:.:..x...:x.:....:........:........... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 1091482 NA +3036 chr4 + 190214555 24339219 24339218 24339258 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 19930137 NA +3039 chr4 + 190214555 24341218 24341217 24341273 56 TATATATATATATATACACACACGTATATAAAATGAGCTAGCAGAACCAAAATAAA chr4 + 94230402 74671078 74671077 74671133 74671078 74671077 74671133 56 TATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAA .......................::.:.:....x:.:x....x:..xx...x.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -50329860 -43900542 +3404 chr4 + 190214555 24351365 24351364 24351450 86 AGCTTGGACAACAGGTGAGAT--------CCTGTCTCAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAGAAGGTAAAATTTAGATTAGAGGAAAA chr4 + 94230402 72824103 72824102 72824196 72824103 72824102 72824196 94 AGTTTAAATAACTGATAAAATGTGGTTTACTATTTTCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAAA ..:..::.:...x.:.:.:..--------.:xx.:......:..:............::.....x.....::..x.:.xx.x....:..:.... 21M8I65M 60/86 69.8% 94/94230402 0.0% 8/86 9.3% -48472738 -45757664 +3130 chr4 + 190214555 24354852 24354851 24354927 76 ACTCCAGCATGGGCGACAGAGCAAGACTGTCAAAAAAAACAAAAACAAACAAACAAAAAACAGAAAAAAAACACCC chr4 + 94230402 31926771 31926770 31926846 31926771 31926770 31926846 76 ATTCCTGAATGGGACATATTGAAGGTCTGGGGAAAAACACCACAAAAAACAAACAAAAAACAGAAAAAAAGAAACC .:...x.x.....xx.:.xx.x.:.x...xx:.....x..x.x..x........................:x.x.. 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -7571919 -86658483 +3050 chr4 + 190214555 24354870 24354869 24354911 42 GAGCAAGACTGTCAAAAAAAACAAAAACAAACAAACAAAAAA chr4 + 94230402 45330835 45330834 45330876 45330835 45330834 45330876 42 GAATAACATCGTTAAAAAAAACAAAAACAAACAAACAAAAAA ..::..x.::..:............................. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -20975965 -73254437 +3364 chr4 + 190214555 24387735 24387734 24387834 100 AGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ........::.:xx.x...............:.....x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....::...::.x.. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% -26760644 -67469758 +3572 chr4 + 190214555 24387739 24387738 24387840 102 AGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAA--ACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ........::..xx.x....................--.x....:xxx....xx:..:x:::.x.x::..::x..:.....:...::..:..:...:..x.. 36M2D64M 67/100 67.0% 100/94230402 0.0% 2/100 2.0% -26760640 -67469762 +4075 chr4 + 190214555 24387740 24387739 24387942 203 GAAAGAAAGAGA-GAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA------AAGAGAAAGAA chr4 + 94230402 59372550 59372549 59372754 59372550 59372549 59372754 205 GGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAA-AAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGG---GGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATA-ACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA .::......x:.-.x...:.::..x:.x..:...:..-...x.xx.....x..x:..x..x:....:..:..x:.x.:x..x..x...:.---.:.x..::.:.::...:...:.x.:x..:..:....:x.:x..x:.:.::.x...x..x...:::...:x..x.-.x..:......x..x:..:.:x.:.------.....:..:.. 12M1I24M1D52M3D74M1D25M6I11M 123/198 62.1% 205/94230402 0.0% 12/198 6.1% -34984810 -59245592 +3242 chr4 + 190214555 24387743 24387742 24387842 100 AGAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG .......:::..xx.x...........:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:.::....::...::.x.. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% -26760636 -67469766 +3606 chr4 + 190214555 24387765 24387764 24387881 117 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAG---AGAGAAAGAGAGAG---AGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA ...:...:...x........x......:..:....-------....x.x.:x..::...::x....:x.xx....---.:.:...xxx.x..---:..:.:.:..x......x:......:...:.:... 35M7I33M3I14M3I35M 82/117 70.1% 130/94230402 0.0% 13/117 11.1% -29623828 -64606574 +3858 chr4 + 190214555 24387774 24387773 24387933 160 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAG-AGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 84536568 84536567 84536724 84536568 84536567 84536724 157 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAA-AAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGG---GAGGAAGAGATTAAGAAGGCAAAAATTAAA ...::.:.::........:...x..x:...:x.:...:x:......-....:..:.::.....:....::xx:x.x.:x.:.:xx..-..xx:...x.xxx..........x.:.x....:.:.xx:.---...:....:.xx.....:.x..:..xx... 46M1D40M1I40M3D30M 99/156 63.5% 157/94230402 0.0% 5/156 3.2% -60148794 -34081608 +3824 chr4 + 190214555 24387815 24387814 24387932 118 AGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..xx.x.......:.......:.....x...::xxx...:xx:::.x.:..x.x::..::x..:.....:....:....::..::..x..------:...x.x...:...:.:. 100M6I18M 76/118 64.4% 124/94230402 0.0% 6/118 5.1% -26760564 -67469838 +3267 chr4 + 190214555 24387819 24387818 24387934 116 AGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAG------AAAGAAAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148500 51148379 51148378 51148500 122 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGG .......:::.:xx.x...:...............:.x.:.::xxx.:.:xx::..x.::.x.x::..::x..:.......:..:..:..:..::..x..------:...x.x...:...:. 100M6I16M 71/116 61.2% 122/94230402 0.0% 6/116 5.2% -26760560 -67469842 +3148 chr4 + 190214555 24387829 24387828 24387893 65 AAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x..:::..xx.x.:..:.....:.:.:::......::..:.............:..x.:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -4626844 -89603558 +3139 chr4 + 190214555 24387845 24387844 24387956 112 AGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAA----AGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 70762130 70762129 70762247 70762130 70762129 70762247 118 AGGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGAAGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAGG ..:.:.:..:.x..x:.:.....:x..::...x......x:.x.:::.----.....x....::.:..x...xx....:.x:.x.xx.x.--:....:..:....:...:...:..:. 48M4I38M2I26M 72/112 64.3% 118/94230402 0.0% 6/112 5.4% -46374285 -47856117 +3353 chr4 + 190214555 24387889 24387888 24387995 107 AGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAA-----------GAAAGAGAA-AGAAAGAAAGAAAGAAAGAAAGGGAGAGGGAG-------------------AAAGGGAGGGAGGGAGAGAGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........:...xx.x...:...:...:.........x.:.-----------....x:...-.x::..::x..:.....:...:...:.:....-------------------:....:......x.x.xx:...... 41M11I9M1I32M19I25M 78/107 72.9% 138/94230402 0.0% 31/107 29.0% -26760490 -67469912 +3147 chr4 + 190214555 24387916 24387915 24387997 82 AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAGGGAGAAAGGGAGGGAGGGAGAGAGGGAGGGA chr4 + 94230402 85790943 85790942 85791024 85790943 85790942 85791024 82 AAGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAA ....:.::.xx.:.xx..:....::...:...:.:.:...::.:.....:...:x........::x:.:.x.x:.....::. 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% -61403027 -32827375 +3062 chr4 + 190214555 24387930 24387929 24388003 74 GAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAGGGAGAAAGGGAGGGAGGGAGAGAGGGAGGGA-TGAAGG chr4 + 94230402 70338957 70338956 70339031 70338957 70338956 70339031 75 GAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ...:.:....:...........x:.::::..::......:.::x...:...:x..x.:.:x..:.:..-....:. 68M1I6M 49/74 66.2% 75/94230402 0.0% 1/74 1.4% -45951027 -48279375 +3268 chr4 + 190214555 24405876 24405875 24405951 76 TTCTGTCTTCCTCCTTTCCTTTCTTCTTTCCCTCCTTCCTTCCCTCCTTCTTGCCTTCTTTTCTTCCTCCCCACTC chr4 + 94230402 57538434 57538433 57538509 57538434 57538433 57538509 76 TTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTC .....x:..x:.x....:::......x:............:.:x.:x..:.:x.:.:....x:.:......:x... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -33132558 -61097844 +3770 chr4 + 190214555 24415052 24415051 24415132 81 CAGTGGCATGCACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCATGAGAATCACTTGAACTCCAGAGGTAGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--.....x....:.:...........::.:......x.x..x...x.........:.x::..x.xx:..:..:.. 6M2D73M 59/79 74.7% 79/94230402 0.0% 2/79 2.5% -51618147 -42612255 +3001 chr4 + 190214555 24424229 24424228 24424299 71 TTGTATGAAAGAGCAATGCTATACACACACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 78617617 78617616 78617687 78617617 78617616 78617687 71 TTGTATGCGATTGCAATGCTCAGAACACAATCTTTCCTTTTTTTTTTGTTCCCAGTTTTTTTCTTGGAATA .......x:.xx........xx:x.....x.:...::..........x..:::xx.......:...::.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -54193388 -40037014 +5293 chr4 + 190214555 24441674 24441673 24441807 134 GAGGAAGAAACAGAAGGAAGGAGGGAAGAAGGAAGAGGAGGGAAGGAAGAAAGGAGGAAAGGAGG---AGGGGAGGAAAAGGGTGGAAGAAAGGAAGGAGAAAGAAGAGAAAGGAGGGGAGGAGAAGGGAGGCAGAA chr4 + 94230402 1500700 1500699 1500833 1500700 1500699 1500833 134 GGGGAAGAGA-AGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatg--gaaaaaaaaaagaaagaaaatggaaatagaa .:......:.-....:.:x..:.........x:..:...:...:.:..:...x::.:.......:---.....:x..x.x.:.x....x..........:..x.--..:...::.::.:.:..:..x...:::.... 10M1D54M3I36M2D31M 92/131 70.2% 134/94230402 0.0% 6/131 4.6% 22940974 NA +3078 chr4 + 190214555 24445044 24445043 24445091 48 CCCTGTCTCAAAAAAAAAGAGAGAGAGAGAGAGAGAAAACCACAGCTA chr4 + 94230402 32424563 32424562 32424610 32424563 32424562 32424610 48 CCTTGCCTCACAAAAGAAAAGAGAGAGAAGGAGGGAAAACTACAGTCA ..:..:....x....:..:.........::...:......:....::. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% -7979519 -86250883 +3119 chr4 + 190214555 24445942 24445941 24445995 54 TGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::...x....x.xx.x...x..........::.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -51587269 -42643133 +3240 chr4 + 190214555 24452261 24452260 24452366 106 ACAAACACACACACACACACACGCACACATGCACCCTATTCTTGTTGGTTTTGTTTTCCTGGAG------AATTCTAATACAGACTATCTA------ACATTGTTGTCATTTCCAGTG chr4 + 94230402 58707029 58707028 58707137 58707029 58707028 58707137 109 ACATGTACACACACACACATATGCACACACTATAGTTATTCTTGCTGTCTTCTTTTTCCTGGAGCTAGGCAATTTT--------CTATCTAGGTGCTATATTGCTGT-GTTTCTATTG ...x::.............:.:.......:xxxxx:........:..x:..:x...........------....:.--------.......------.:....:...-:....:.x.. 64M6I6M8D7M6I10M1D10M 74/97 76.3% 109/94230402 0.0% 21/97 21.6% -34254768 -59975634 +3236 chr4 + 190214555 24466783 24466782 24466856 74 GTGCGCCTGTTGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATTGCTTGTACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x...x..:.........::::........x.xx.x...x::....x......:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -51566421 -42663981 +3734 chr4 + 190214555 24466887 24466886 24467029 143 AAAAAAAAAAAAAAGAGGAAGGAAGGAAGGAAGGGAAGGAAGGGAGGGAGAGAAAGAA-------AAAGAAAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGA--GGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 84536585 84536584 84536724 84536585 84536584 84536724 140 AAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAA-------AGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAA-----GAGATTAAGAAGGCAAAAATTAAA .....x..x.....x......x:.:...::.......-------........:.....-------.:x:...xx.:x.:xx:...x.xxx..........x.:.x..:.....--........-----.:..xx.....:.x..:..xx... 37M7D14M7I48M2I8M5D24M 95/131 72.5% 140/94230402 0.0% 21/131 16.0% -60069698 -34160704 +3065 chr4 + 190214555 24466908 24466907 24466992 85 GAAGGAAGGAAGGGAA-GGAAGGGAGGGAGAGAAAGAAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGA chr4 + 94230402 75241501 75241500 75241586 75241501 75241500 75241586 86 GATGGTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ..x..x..:x...:..-:.:.:xx.x:..x............:..:.......:...x.:::xx........x..:.x.x:..... 16M1I69M 58/85 68.2% 86/94230402 0.0% 1/85 1.2% -50774593 -43455809 +3569 chr4 + 190214555 24466920 24466919 24467096 177 GGAAGGAAGGGAG--GGAGAGAAAGAAAAAGAAAAAAAGAAAGAAAGAAAGAAA------GAGAAAGAA--------AGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAGAAAAA-----------------GAAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAG chr4 + 94230402 17246041 17246040 17246250 17246041 17246040 17246250 210 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGGG .:....x..x..:--.:::.x:...x..x..x.:..:..........x:...:.------....x.:..--------..::x...:.xx..::...........:.:.:xx.xx.:::.:.......:x.:.:x.:x..::......:x.-----------------::........x...:x:....::x:xx..x.:.:....x..:. 13M2I39M6I9M8I73M17I43M 111/177 62.7% 210/94230402 0.0% 33/177 18.6% 7220879 NA +3664 chr4 + 190214555 24466939 24466938 24467103 165 AAAGAAAAAGAAAAAAAGAAAGAAAGAA-AGAAAGAGAAAGAAAGA-AAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGA--GAGAAAAAGAAAGAAAGAGAAAGAAAG--AAAGAAAGGGAGAGAGAGAGAGAGAGAGAAG chr4 + 94230402 49044653 49044652 49044821 49044653 49044652 49044821 169 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAG--AAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG .....xx..::.:.......x:.:...x-..:::x:.xx.......-...x..x...--.:.x.xx...x.:::..:.:....:xx.........::..::.x..:.:.--:.::...........x..::x.....:--:.::xx...:....:..:.:x...x:.x... 28M1I17M1I10M2D50M2I27M2I31M 104/163 63.8% 169/94230402 0.0% 8/163 4.9% -24577714 -69652688 +3054 chr4 + 190214555 24466954 24466953 24467014 61 AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAG chr4 + 94230402 26216011 26216010 26216071 26216011 26216010 26216071 61 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG ..x.:x............:......x::.:.:..::::.:.:...x:..:.........:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -1749057 -92481345 +3054 chr4 + 190214555 24466958 24466957 24467018 61 AAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAG chr4 + 94230402 26216011 26216010 26216071 26216011 26216010 26216071 61 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG ..x.:x..........:........x::......::::.:.....x:...::.::....:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -1749053 -92481349 +3032 chr4 + 190214555 24466968 24466967 24467017 50 GAAAGAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAA chr4 + 94230402 10675423 10675422 10675472 10675423 10675422 10675472 50 GAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAA ...::...:......:..:..:......:...:.x.:....:::...... 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 13791545 NA +3318 chr4 + 190214555 24467017 24467016 24467118 102 AGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAGAAAAAGAAAGAA----------------------AGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAGAG---AGAAGGAGGGAGGGAGGGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........:--...xx.x.................:.:.x....----------------------:...::x..:.....:...:...:.::...:..x..x:---x....x.x.:...:...... 9M2D33M22I38M3I20M 74/100 74.0% 125/94230402 0.0% 27/100 27.0% -26681362 -67549040 +4078 chr4 + 190214555 24467021 24467020 24467134 114 AGAAAGAAAGAGAAAGAGAGAGAGAGAGAAAAAGAAAGAAAGAGAAAGAA---AGAAAGAA-----AGGGAGAGAGAGAGAGAGAGAGAAGGAGGGAGGGAG---GGAGGGATGGAGGAAGGAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........::..xx.x.............:.......x.:.::xxx....---.:.x:...-----....x......:.:.:.::..:.........x:.x:---x..:.x...:.......:.. 50M3I8M5I36M3I20M 82/114 71.9% 125/94230402 0.0% 11/114 9.6% -26681358 -67549044 +3263 chr4 + 190214555 24467058 24467057 24467154 97 GAAAGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAGAGAGAA----GGAGGGAGGGAGGGAGGGATGGAGGAAGGAAGGAAGGAAAGAAAAGCGAACA chr4 + 94230402 1053162 1053161 1053262 1053162 1053161 1053262 101 GGAGGGGAACGAGATCATGGAAAGAAGAGAGATAGAAAGATAGAAATCCAGAGGAAGGGGGAGAGGGGCAAAGACATGGGAAGGAGACAGACAAACGCACA .:.:.:...x..:.xx.x.:..:.:.......x...:...x....----:....:....:.:.....::::..:x.x.:::::::..x...x..:..x... 45M4I52M 61/97 62.9% 101/94230402 0.0% 4/97 4.1% 23413896 NA +3237 chr4 + 190214555 24467058 24467057 24467137 80 GAAAGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAGAGAGAAGGAGGGAGGGAGGGAGGGATGGAGGAAGGAAGGAA chr4 + 94230402 70338957 70338956 70339034 70338957 70338956 70339034 78 GAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGG--GGAGAGTGAAAGCAA ...:.:....:...........x.::::....:....:.:.:.x:..:...:x..x...:x..--....::x.:...x.. 63M2D15M 53/78 67.9% 78/94230402 0.0% 2/78 2.6% -45871899 -48358503 +3006 chr4 + 190214555 24479061 24479060 24479199 139 AAAAAAAAAAAAGAGAAGAAGAGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGGAGAAGGAGGAGAAGGAGAAGAAGGAGAAGAAGGAGAAGGAGAAGGAAGAAGAAGGAAGAAGGAAGA chr4 + 94230402 59372617 59372616 59372754 59372617 59372616 59372754 138 AAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAA-AAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA ....x..x..x.:x:.x..:.:..:x..::::.:.::.:..:..x..x..:.:...:..x.:x:.x..-....:x...x.:x.:.....:..x..x:.x.:....:.:x.:x.:.:..x.:.xxx.:x....:.:..:. 68M1D70M 79/138 57.2% 138/94230402 0.0% 1/138 0.7% -34893556 -59336846 +3016 chr4 + 190214555 24479668 24479667 24479734 67 GAGATAGATGTGCATCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCTCA chr4 + 94230402 41536895 41536894 41536961 41536895 41536894 41536961 67 GAGAGAGACAGCTGCATTTCTCCCTCTTGCTCCTCCCCTCCCCCCCACCCCCCCTTTTTCTTTCCTA ....x...::xx:::x.:....:....:x....::.......:...x...:....:.:...:..::. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% -17057227 -77173175 +3053 chr4 + 190214555 24479668 24479667 24479742 75 GAGATAGATGTGCATCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCTCAACAGTCCA chr4 + 94230402 41536899 41536898 41536973 41536899 41536898 41536973 75 GAGACAGCTGCATTTCTCCCTCTTGCTCCTCCCCTCCCCCCCACCCCCCCTTTTTCTTTCCTATACAGCATTTTA ....:..x..:::x....:....:x...:::.......:...x...:....:::...:..::x:x..:..x.::. 75M 47/75 62.7% 75/94230402 0.0% 0/75 0.0% -17057231 -77173171 +3186 chr4 + 190214555 24482056 24482055 24482121 66 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCATGCGTGTGCGTGT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx...:.:.:::.:::..:.:..:.:....x:.:.:.x:.... 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -54783463 -39446939 +3119 chr4 + 190214555 24482062 24482061 24482131 70 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCATGCGTGTGCGTGTGCGTGCCAAC chr4 + 94230402 79265519 79265518 79265588 79265519 79265518 79265588 70 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCAC .............::........xx...:.:.:.:::.:..:.:...::..::x:.:.:.x:...:.x.. 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% -54783457 -39446945 +3058 chr4 + 190214555 24483969 24483968 24484027 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -51549237 -42681165 +3165 chr4 + 190214555 24493240 24493239 24493310 71 AAAAAATAAAAAATAATATATATATATACACACACACACACACACACACACACACACACACACATACACAC chr4 + 94230402 36538936 36538935 36539006 36538936 36538935 36539006 71 AAAAAATGCAAATTAAAATATAAATAAGTATAAATGTACACACACAGGCATACACACAAGCATGTATGCAC .......:x...x...x.....x...x::.:.x.:::.........x:..:.......x:..::..::... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -12045696 -82184706 +4165 chr4 + 190214555 24495543 24495542 24495717 175 GAGAAAGAAAGAAG------GAAAAAAGAAAGGGGA----AGAGAAGAAAAGAGAGAGAAGGGAGGGAGGGAAGGAAAAAAGGAAAGAA-----AAAGGAAGAGAGGAAGGGAGAAGAAGAAGGAGGAGGAGGAGGAGAAGGAGAATAGAAGGAAGGAAGGAGAAAAGAAAGA-GATTGAGAGAAACATTG chr4 + 94230402 14751828 14751827 14752012 14751828 14751827 14752012 185 GAGAAAGTAAGAAAACCTCTGGCAATATAAAGGAGATCTAACAGAAGAAATAA------ATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAACATTG .......x.....:------.:x..x.x.....:..----.x........x:.------.xx....x..x.::.....:.:.x::....-----...:x..:.x.x:....x................xx.::.:..:::.....xx.:...x...::x::.:xx...::...-:.xx:..:......... 14M6I16M4I13M6D30M5I79M1I17M 114/169 67.5% 185/94230402 0.0% 22/169 13.0% 9743715 NA +3102 chr4 + 190214555 24495603 24495602 24495666 64 GAAGGAAAAAAGGAAAGAAAAAGGAAGAGAGGAAGGGAGAAGAAGAAGGAGGAGGAGGAGGAGA chr4 + 94230402 48632627 48632626 48632690 48632627 48632626 48632690 64 GAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA ...:.x.:..........x..:....:.....:.:x.::.:....x:.:..:.x..::.:.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -24137024 -70093378 +3048 chr4 + 190214555 24495658 24495657 24495710 53 AGGAGGAGAAGGAGAATAGAAGGAAGGAAGGAGAAAAGAAAGAGATTGAGAGA chr4 + 94230402 27719997 27719996 27720049 27719997 27719996 27720049 53 AAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGATTGAGGGA .:..:..:...::...x.::.::..:..........x:............:.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -3224339 -91006063 +3215 chr4 + 190214555 24528897 24528896 24528951 55 AAAAAACAAAACAAAACAAAAAAAAACAGATTTCTGCAAGCAAGAAAC-AGTACTG chr4 + 94230402 90850286 90850285 90850341 90850286 90850285 90850341 56 AAAAGACAAAACAAAACAAAAAAATGCAGATTTCAGGAAGCATAAAGCAAATACTG ....:...................x:........x.x.....x:..:.-.:..... 48M1I7M 46/55 83.6% 56/94230402 0.0% 1/55 1.8% -66321389 -27909013 +3645 chr4 + 190214555 24547854 24547853 24547956 103 CATATATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATA---TATATATATCTATATCTATATCT chr4 + 94230402 60831522 60831521 60831627 60831522 60831521 60831627 106 catacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT ....:..:...x.....x.............x.x.x...:.:.....::::.:.:::.:.:x.x..x...:..x.....:---.:.::::..x.:.:.x...x... 80M3I23M 68/103 66.0% 106/94230402 0.0% 3/103 2.9% -36283668 -57946734 +3453 chr4 + 190214555 24547857 24547856 24547934 78 ATATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 60831523 60831522 60831600 60831523 60831522 60831600 78 atacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...::.x...x.....x.............x.x...:.....:.:.::.:.:.:::.:.:x.x..x...:..x..... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -36283666 -57946736 +3084 chr4 + 190214555 24547859 24547858 24547912 54 ATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATAT chr4 + 94230402 26578265 26578264 26578318 26578265 26578264 26578318 54 ATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGT ..x...................:.:.:.:.:.xx..........x.:..::.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -2030406 -92199996 +3694 chr4 + 190214555 24547864 24547863 24547936 73 TCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATA-TATATATATATATATATATATATATAT chr4 + 94230402 4618362 4618361 4618433 4618362 4618361 4618433 72 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT-TATATGT .......::..............x:.....:..:...x.x......-....x......-.......-.....:. 46M1I11M1D7M1D7M 61/71 85.9% 72/94230402 0.0% 3/71 4.2% 19929502 NA +3394 chr4 + 190214555 24547866 24547865 24547962 97 TCTCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATATAT-ATATATCTATATCTATATCTATATCT chr4 + 94230402 60831530 60831529 60831627 60831530 60831529 60831627 98 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT ...x.....x.............x.:.:...:.:...:..:.:.:.:::.:.:x.x..x...:..x.....-:.x.:.x:::..x.:.:.x...x... 71M1I26M 64/97 66.0% 98/94230402 0.0% 1/97 1.0% -36283664 -57946738 +4276 chr4 + 190214555 24547868 24547867 24548017 150 TCTCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATATATATATATCTATATCTATATCTATATCTATCTGCT--GATGGGGACTATATATCTGCTGATGGGGAATCAAAGATGTCTTCCCAG chr4 + 94230402 60831530 60831529 60831679 60831530 60831529 60831679 150 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-GTCTGTGCGCATGTGTGTATATTTCTCATAAGATCTGAACTATG-AGCTTAGAATGTTTAAAAAAAAAAGTTTTCTCAG ...x.....x.............:.....:..........:.:.:.:::.:.:x.x..x...:..x.....:-:...:.::x:..:.x.:...x.x...xx.--...xx.:.....:-.x..xxx:...xxx..xx...:.x..:...:... 72M1D29M2I13M1D34M 99/148 66.9% 150/94230402 0.0% 4/148 2.7% -36283662 -57946740 +3492 chr4 + 190214555 24547870 24547869 24547940 71 TCTCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x...........x...:.:...:...:....:.:.:.:::.:.:x.x..x...:..x..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -36283660 -57946742 +3136 chr4 + 190214555 24547872 24547871 24547942 71 TCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.........x.x.:.....:.:.:.:....:.:.:.:::.:.:x.x..x...:..x..... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -36283658 -57946744 +3453 chr4 + 190214555 24553648 24553647 24553719 72 GCACCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...::.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -51479558 -42750844 +3433 chr4 + 190214555 24554089 24554088 24554147 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x............ 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -51479117 -42751285 +3807 chr4 + 190214555 24569452 24569451 24569535 84 CATGGTGGCGCACACCTATAGTCCCAGCTACCTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::....:....:--.:....:........:...:........x.xx.x...x.:.........:.:..x:xx:..:..:... 14M2D68M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -51463745 -42766657 +3654 chr4 + 190214555 24580273 24580272 24580349 77 GTGGCACGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGACGGGAAGATCACTTGAGCCCTGGAATTTGAGACTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::.:.x......:........:..::........x.xx.x::.x.......:...x.:.::..x:.:...:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -51452928 -42777474 +3036 chr4 + 190214555 24587726 24587725 24587793 68 AGGAAAGAAAGAAAGGAAGAAAGGAAGGAAAGAAGAAAGGAAGAAAAGAAGGAAAGGAGGAAAGAGAA chr4 + 94230402 84536568 84536567 84536635 84536568 84536567 84536635 68 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAA .:.::.:.::.....:..:...x:.x::...x.:...:x........:.:.......::..:::.... 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% -59948842 -34281560 +3036 chr4 + 190214555 24596046 24596045 24596126 81 GTTCAAGAGCAGCTTGGGCAACATAGCAAGACCCAGTTTCTATCTGGAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAA chr4 + 94230402 69091232 69091231 69091312 69091232 69091231 69091312 81 GTTGAATAAAATATTAGACAGAAAATCAAAAATCAGGTTAAATCTGGCAAAAAAAAAAAAAAAAAAGAAAGGTTATAAAAA ...x..x.:x.xx..:.:..:x.x.x...:.x:...x..xx......x..............:.......:.xx.x:.... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -44495186 -49735216 +3692 chr4 + 190214555 24599670 24599669 24599737 68 CAGTGGCACGTACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......::.--..x....:.:............:........x.xx.x...x...........:.:.. 9M2D57M 53/66 80.3% 66/94230402 0.0% 2/66 3.0% -51433529 -42796873 +3113 chr4 + 190214555 24607883 24607882 24607946 64 GTTGCTATTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTGAGATGGAGTCTCGCT chr4 + 94230402 41716553 41716552 41716616 41716553 41716552 41716616 64 GCTGCTGTTCTCTTTTCTTTGTCTCTTTCTTGCTTTCCTTTGTCCTTTCATATTAAGTCTGGCT .:....:..:.::...:...x.:........x.....:...x.::...x.x..x:.....x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -17108670 -77121732 +3200 chr4 + 190214555 24609385 24609384 24609435 51 AGAGGCACTAAAAAAAAAAACAAAAACAAAATCAAACCAAAAAAACTACAT chr4 + 94230402 56895737 56895736 56895787 56895737 56895736 56895787 51 AAAGGTACTAAATAAAAAAACAGAAACAAAAACAACCCACACAAACCACAT .:...:......x.........:........x...x...x.x....:.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -32286352 -61944050 +3180 chr4 + 190214555 24609793 24609792 24609912 120 CTTTCCATTCTTGAAACTCTGAGTTTGTATTTTTGTTTGCTTGTTTTTTGGAGTTTTTTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTGAGACTCAGTCC--TGCTCTGTTGCCAGG chr4 + 94230402 85388103 85388102 85388222 85388103 85388102 85388222 120 CTTTCCACTCTCAATATTCCTCCTAAATGTTTTTTTTTTGATGTTTTTTGAGGTTTTTTT--TTATGTTTTTTGTTTTTTAAATCTATTATGTGAGGAACAGATCAATGCTTCATTACCAGG .......:...::.x.:..:xxx.xx:.:.....x...xxx.........::........--..x......x.x...x..x:x.:xx..:.x....:xx...x:.--....:::..:..... 60M2D43M2I15M 78/118 66.1% 120/94230402 0.0% 4/118 3.4% -60778310 -33452092 +3086 chr4 + 190214555 24609830 24609829 24609881 52 TGCTTGTTTTTTGGAGTTTTTTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTT chr4 + 94230402 85943120 85943119 85943171 85943120 85943119 85943171 52 TGTTTATTTTTGTGGGTTTTTTTTGGTGCTGTTTGTTTTTGTTTGTTTGTTT ..:..:.....xx.:..........x.x:xx..................... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -61333290 -32897112 +3078 chr4 + 190214555 24609839 24609838 24609881 43 TTTGGAGTTTTTTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTT chr4 + 94230402 22713665 22713664 22713707 22713665 22713664 22713707 43 TTTGAGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTGCCT ....::.x...........................x....::. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 1896174 NA +3412 chr4 + 190214555 24611023 24611022 24611128 106 AAAAAAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGAAGCAGAA chr4 + 94230402 9464447 9464446 9464552 9464447 9464446 9464552 106 AGAAAAGGCAGCAAACGATAAAAAGGAAGACAAAAAGGCAGCAACAAAAGGGAAGAAAGGAGCCAAAGGCAAAGACGAAACTAAACAAGAGGATGCAAAAGAAGAA .:....:.x..x.:.x..x:..:.......x:..:...x..x.:x.:...:::.::...:..xx:...:x:....x...:xx:..x....:.xx...:...x.... 106M 66/106 62.3% 106/94230402 0.0% 0/106 0.0% 15146576 NA +3028 chr4 + 190214555 24611029 24611028 24611095 67 AGAAGAAGAAGA---AGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535423 9535422 9535492 9535423 9535422 9535492 70 AGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ......x..:x.---...:....:.....x.............:.x:.::..::....xx.:.:...:.. 12M3I55M 49/67 73.1% 70/94230402 0.0% 3/67 4.5% 15075606 NA +3159 chr4 + 190214555 24611032 24611031 24611109 78 AGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548760 35548759 35548837 35548760 35548759 35548837 78 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA ...:.x...:.......x.....x.:.......:..x....x...:...:xxxx.....x.x:x::....:x...x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -10937728 -83292674 +3187 chr4 + 190214555 24612101 24612100 24612183 83 CATGGTGAAGCATGCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCGCTTGAACCTCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:x...:.--....:.:...........:x........x.xx.x...x.:........:x.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -51421096 -42809306 +3058 chr4 + 190214555 24624251 24624250 24624309 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -51408955 -42821447 +3295 chr4 + 190214555 24625914 24625913 24626001 88 ATTTTAAAAGCC--ACATGGAAATGTAAGTGCCTGAATAACAAAGAAAATATGCAGAAGATAAATAATGAGAGACTTGCCTTCAACTGAA chr4 + 94230402 7270077 7270076 7270166 7270077 7270076 7270166 90 ATTATAAAAGCATAGCATTGATGTGTAAATGATTGATTAACAAAGAAAATAAGAAGAAAATACAGACTTAGAAGTGTTTTTTTAATTGAA ...x.......x--:...x..x:.....:..x:...x..............x.x....:...x.x.x.x...:::x.x::..:..:.... 12M2I76M 62/88 70.5% 90/94230402 0.0% 2/88 2.3% 17355837 NA +3175 chr4 + 190214555 24628035 24628034 24628088 54 ATTTACATATTAATATGTATATAATACATTATATGCATATATACCTAAAATATA chr4 + 94230402 90690388 90690387 90690441 90690388 90690387 90690441 54 ATGCACATTTAAATATGCATATTATATATTATATGCACATGCACATAAAATATA ..x:....x.x......:....x...:..........:..::..x......... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -66062353 -28168049 +3137 chr4 + 190214555 24654017 24654016 24654062 46 TAGGTTTTCTTTCTGTTTGTTTGTTTTGCCTTTTTTTTTTTTTTTT chr4 + 94230402 28946008 28946007 28946053 28946008 28946007 28946053 46 TGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTT .:......:.x.:............xx..:................ 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -4291991 -89938411 +3899 chr4 + 190214555 24658501 24658500 24658744 244 TGAAACCAAAAGGTTTATTTGCAAATACCCTGGGTTTTCCCAGAAAGAATTTCAGGCAGCTTCCTTGCCCTTTGGCCTCATTGCTTACAAGTGACTTTTTCCTTTGCTGCATGTGCTGTGATATTTTTCTCTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCT chr4 + 94230402 63697022 63697021 63697235 63697022 63697021 63697235 214 TGGGACCAAAATGTTTACCC-------TCTTAGGGTTACTGAGTATGAATTTCAG-TAATTTCCATGCTTTCTTATTATATT---TAAATGTGA---------GTACTCCACAGACTTT---ATTCCTCTC-------CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..::.......x.....:::-------:.:.:..x..x.:x..x.x.........-:.::....x...::.:.x:::x:...---..x.x....---------x.:..x..::x:..x.---...::....-------..::.:xx.x:...:...:......:.:x..::.:.x....xx.:.:.x....xxx:::..x....:.:x.xx.......:..:.:.::..........::..::. 20M7D28M1D26M3D9M9D16M3D9M7D106M 132/214 61.7% 214/94230402 0.0% 30/214 14.0% -39038521 -55191881 +3341 chr4 + 190214555 24658631 24658630 24658759 129 CTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTC chr4 + 94230402 2692241 2692240 2692365 2692241 2692240 2692365 125 CTCTGTGCCTCC---TTCCTCTTCCTCCATTAATTGCTTTCTG-ATTAGTCCCCATTTCTTTCTATATTTTCTGCTTACAGTGCATTTTTTTCTTTGTTTCTTTCTCCATCGTTTCCTTCTTGCTCTCC ..:.x..:....---..:..:..:...:x..xx..x......x-x..xx..:::x.........x.x...::.x...x.xx.x:x.:...:.....x.........::x.:x:.......:.x.::.:. 12M3D28M1D85M 81/125 64.8% 125/94230402 0.0% 4/125 3.2% 21966390 NA +3376 chr4 + 190214555 24658641 24658640 24658804 164 CCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCT chr4 + 94230402 19215407 19215406 19215566 19215407 19215406 19215566 160 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTA-TTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCT---TCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...::::..:::::.:.:....:...:...:xx.::.xx:xx......x..::...x......xxx....x.x-....::xx...::...:x..::....x..x.....:xxxx..---.:....xx.........x:...x:x..:..::x.:..:.x.:... 73M1D42M3D45M 95/160 59.4% 160/94230402 0.0% 4/160 2.5% 5443234 NA +3760 chr4 + 190214555 24658667 24658666 24658788 122 CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.:.:.x....xxx::...x...::.:x.xx:.....--...::...:...........:....:. 13M1D79M2D27M 78/119 65.5% 119/94230402 0.0% 3/119 2.5% -39038450 -55191952 +3066 chr4 + 190214555 24658715 24658714 24658818 104 TTCTTTCTCTTTCTT-TCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTC---------------CTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTCTCTCTCTCTTTAT chr4 + 94230402 34544726 34544725 34544845 34544726 34544725 34544845 120 TTCTTCCTCAAGCTTGTCCTGCTGTTCTTCATCTCTACCCCTACGCTTCCATTAAGAACTGGAGTTCAGCTTTTTTCTTTCTTTCTTTCCTGCCCTTTTACTTTCTCCTGCTATTTTTGT .....:...xxx...-..:.x..x..:.:.x..::.x.::.:x:x...:.x..x---------------....................:.x..:.:..x.......::x..x.:...:. 15M1I38M15I51M 71/104 68.3% 120/94230402 0.0% 16/104 15.4% -9886011 -84344391 +3153 chr4 + 190214555 24658721 24658720 24658805 85 CTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..:.......::..x.:::.x:.:......:::.:..xx:.x..x.::..:.....:...::...x.....x..xx:.x...... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% -32713305 -61517097 +3184 chr4 + 190214555 24658730 24658729 24658813 84 TCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTCTCTCTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:........:.:x.:...x:.:.....::::::..xx..x:.x.:.........:...::.:.x.....x..xx..x.:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -32713297 -61517105 +3560 chr4 + 190214555 24675239 24675238 24675315 77 GTAACGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....x......:.........::::........x.xx.x...x..........::.:..x:xx:..:..:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -51357962 -42872440 +3058 chr4 + 190214555 24680004 24680003 24680062 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx::x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -51353202 -42877200 +3284 chr4 + 190214555 24686746 24686745 24686820 75 GGCACACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGACTGCTTGATCCAGGAAGGTCGAGGCTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x..:...:.........:.::........x.xx.x.:.x::.....x..x:....x.:x:.....:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -51346457 -42883945 +3302 chr4 + 190214555 24695786 24695785 24695862 77 ATTCCTTCCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTC chr4 + 94230402 53757783 53757782 53757859 53757783 53757782 53757859 77 ATTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCC ....::.:.:x....::.:x.:....xxx.:..::..::..::.::..:...:.....:...:.........:..:. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% -29061997 -65168405 +3229 chr4 + 190214555 24703871 24703870 24703977 107 AATAATATGAAAAAATTAGCCAGGTGTGGTGGTTTCTGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTTAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033177 76033176 76033277 76033177 76033176 76033277 101 AATGTCATGAAAGGATGATACACA-GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x:......::..x.xx..x:-......-----::.x..................::........x:xx.x...x::...x.:..::.:..x.:x:.....:.. 24M1D6M5D71M 68/101 67.3% 101/94230402 0.0% 6/101 5.9% -51329306 -42901096 +4016 chr4 + 190214555 24718400 24718399 24718515 116 CATGGTGGTGCGTGCCTGTAGTACCAGCTACTTGGAAGGCTGAGGCAGGAGAATTACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA---------TTGCCCTACAGCCTG chr4 + 94230402 76033197 76033196 76033312 76033197 76033196 76033312 116 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTA-AGCCTG ..::.......::.--......x...........:.........x.xx.x...x:..........:.:..x:xx:..:..:..------..x..x......---------x.......-...... 14M2D67M6D12M9I8M1D6M 83/107 77.6% 116/94230402 0.0% 18/107 16.8% -51314797 -42915605 +4194 chr4 + 190214555 24720800 24720799 24720889 90 TGGACAAGTCGCTTAACCTCTCAATGCTTTGGTTTTCTCATCTGTAAAATGAGGATAATAATAG-TACCTACTTCATAGGGTAGTGATGAG chr4 + 94230402 83501146 83501145 83501236 83501146 83501145 83501236 91 TGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAG ...:...:.::........x.xx:...:.::......:..:..........::.x.:...:..:-.......:...:....xx:.x:.... 64M1I26M 64/90 71.1% 91/94230402 0.0% 1/90 1.1% -58780346 -35450056 +3058 chr4 + 190214555 24753988 24753987 24754030 43 TTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTGG chr4 + 94230402 6554016 6554015 6554058 6554016 6554015 6554058 43 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGG ...x..x....:...:...:...:................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 18199972 NA +6781 chr4 + 190214555 24768171 24768170 24768314 144 TGCTGATCTTAAACAGCTGCGTGTGGATAATGTTAGCAGGAACAGGGCAATTGAGGAACTTGAGAACGCTAGTGCTGTGATTGAAGCCACCTGTCCTGGCATCACAGGTAAGATGGTGAAAAAGTTAACTGGGAAATTTCAAAA chr4 + 94230402 3445721 3445720 3445864 3445721 3445720 3445864 144 TACTCAGCTCAAGCAGCAGGACACAAATAATGCTAGCAGAAAGAAGGCAATTGAGGAACTTGAAAAAAGCATCAATATGGCAGAAGCAACATGTCCAGGGATCACAGATAAGATGGTGAAGAAACTTATGGAGAAATTTCAGAA .:..x.x..:..:....x.x::::::......:......:..x.:..................:..x:x:.x::x.:..::x.....x..x.....x..x.......:............:..::.x.:x.:.........:.. 144M 101/144 70.1% 144/94230402 0.0% 0/144 0.0% 21322450 NA +3058 chr4 + 190214555 24773408 24773407 24773450 43 TTTACATACATGTATACATGTACATACACATACATATATGTAT chr4 + 94230402 35305765 35305764 35305807 35305765 35305764 35305807 43 TTTACATACTTATATAGATGTACATGCACATACATGTATATAT .........x.:....x........:.........:...:... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -10532357 -83698045 +3020 chr4 + 190214555 24773429 24773428 24773501 73 ACATACACATACATATATGTATACATGCATATATGTACATACACATACATATATGTATACATGTATATATGTA chr4 + 94230402 61270769 61270768 61270841 61270769 61270768 61270841 73 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...xx..::x.:....x......:...:.....:.:..:......x...:x:.......x:.::.:.xx..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -36497340 -57733062 +3517 chr4 + 190214555 24773459 24773458 24773575 117 ATATGTACATACACATACATATATGTATACATGTATATATGTACATACATATACATATATGTATACATGTATATATGTA--CATACATATACATATATGTATACACGTATATATGTACA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATAC----TCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x:.....::.:::.x.x...:x:.:.:.x.........x:........----x:..:...x.:..::......--...:.x.x.:::.......:..::x:...::...:... 54M4D21M2I38M 73/113 64.6% 115/94230402 0.0% 6/113 5.3% 3664272 NA +3011 chr4 + 190214555 24773465 24773464 24773537 73 ACATACACATACATATATGTATACATGTATATATGTACATACATATACATATATGTATACATGTATATATGTA chr4 + 94230402 61270769 61270768 61270841 61270769 61270768 61270841 73 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...xx..::x.:....x......:.........:.:..:....:.x...:x:.......x:.::.:.xx..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -36497304 -57733098 +4065 chr4 + 190214555 24773495 24773494 24773621 127 ATATGTACATACATATACATATATGTATACATGTATATATGTACATACATATACATATATGTATACACGTATATATGTACATACATATACATATATGTATACATGTATACATGCATATGTGCATACA chr4 + 94230402 21109187 21109186 21109311 21109187 21109186 21109311 125 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACT--CATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA ..x..:x:......:.:::.x.x...:x:.:.:.x.........x:........x::.:.::x..:......:..:x--...:.x.x.:::.......:..::x:...:......:.:.x.xx.... 77M2D48M 79/125 63.2% 125/94230402 0.0% 2/125 1.6% 3664308 NA +3086 chr4 + 190214555 24773501 24773500 24773559 59 ACATACATATACATATATGTATACATGTATATATGTACATACATATACATATATGTATA chr4 + 94230402 61270769 61270768 61270827 61270769 61270768 61270827 59 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ...xx...:x.:....x......:.........:.:..:....:.x...:x:....... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -36497268 -57733134 +3133 chr4 + 190214555 24773513 24773512 24773617 105 ATATATGTATACATGTATATATGTACATACATATACATATATGTATACACGTATATATGTACATACATATACATATATGTATACATGTATACATGCATATGTGCA chr4 + 94230402 42936204 42936203 42936305 42936204 42936203 42936305 102 ATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGCTGAAATAC---TCTAAACACTTTTAAATTCATGCTTGCA ..x.x..x..:..........::...x......:.:..::.x..:.:...::.x...:.:.:..:.xx.x.:.:---.x..x...:x.x..x..x...::x.... 74M3D28M 66/102 64.7% 102/94230402 0.0% 3/102 2.9% -18162691 -76067711 +3719 chr4 + 190214555 24773531 24773530 24773643 113 ATATGTACATACATATACATATATGTATACACGTATATATGTACATACATATAC----ATATATGTATACATGTATACATGCATATGTGCATACATGCATATATGTATACATGCACA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTG--TATATGTGTATGAATATGCATGCACA ..x..:x:......:.:::.x.x...:x:.:::.x.........x:........----:..:x.:..:::.....:x.....x.x....--..:...::...:x:...:........ 54M4I31M2D26M 74/111 66.7% 115/94230402 0.0% 6/111 5.4% 3664344 NA +3131 chr4 + 190214555 24773537 24773536 24773609 73 ACATACATATACATATATGTATACACGTATATATGTACATACATATACATATATGTATACATGTATACATGCA chr4 + 94230402 61270769 61270768 61270841 61270769 61270768 61270841 73 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...xx...:x.:....x......:.:.......:.:..:....:.x...:x:.......x:.::.:.xx.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -36497232 -57733170 +3684 chr4 + 190214555 24785526 24785525 24785607 82 TCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCCTTCCTTTTTTCTTTTCTTTTCTTTTCTTTTATTTTCTCTTCTTTCTT chr4 + 94230402 57538430 57538429 57538511 57538430 57538429 57538511 82 TCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ...:....xx.:.x..x::.......::..x....:.....::.:..x..x......:...:......::...:::::..:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -32752904 -61477498 +3191 chr4 + 190214555 24796395 24796394 24796461 67 AATTTTCTTTCCCCCTTTTCC---------TCCTCCTCCTCCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757782 53757781 53757857 53757782 53757781 53757857 76 AATTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ....:....:.x:.:.....x---------...:..:..:..::.::::.........::.......:........ 21M9I46M 49/67 73.1% 76/94230402 0.0% 9/67 13.4% -28961387 -65269015 +3120 chr4 + 190214555 24796396 24796395 24796460 65 ATTTTCTTTCCCCCTTTTCCTCCTCCTCCTCCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757793 53757792 53757857 53757793 53757792 53757857 65 ATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ..:..:..:x..:...xxx::..:..:..:..::.:..::.......::.......:........ 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -28961397 -65269005 +3137 chr4 + 190214555 24796404 24796403 24796479 76 TCCCCCTTTTCCTCCTCCTCCTCCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACATGGTCTCATTCT chr4 + 94230402 50052656 50052655 50052728 50052656 50052655 50052728 73 TCATCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTTAAGTTGGAAATA---TTCCATTCT ..x:..:.:........:.x.x::..:x........:...............xxx..x..:.:.---.::...... 64M3D9M 53/73 72.6% 73/94230402 0.0% 3/73 4.1% -25256252 -68974150 +3633 chr4 + 190214555 24796414 24796413 24796485 72 CCTCCTCCTCCTCCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACATGGTCTCATTCTGTCACC chr4 + 94230402 56907963 56907962 56908031 56907963 56907962 56908031 69 CCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT--GGCAAGGGCTT-TTCTTTCACC ..:::.........x........:.:.:..............:.....--.:..x..x..:-....x..... 48M2D11M1D10M 56/69 81.2% 69/94230402 0.0% 3/69 4.3% -32111549 -62118853 +3797 chr4 + 190214555 24828651 24828650 24828723 73 TGCACCTGTGGTCCCAGCTACAAGGGAGGCTGAGGCACATGAATCACTTGAACCCGGGAGGTGGAGGTTGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:........xx.::........x.x::....x...........:.:..x.xx:..:..... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -51204554 -43025848 +5561 chr4 + 190214555 24838985 24838984 24839122 138 AAAATTAT-ACTAAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAAGAGAGAAAATGACCAAATGC--ACCCAAATAT chr4 + 94230402 75248028 75248027 75248160 75248028 75248027 75248160 133 AAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCA--------CACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaaaagaaaagaaaATCCTATCCCAAGTAT ........-..x..:x.xx::..::...................x--------................x.x.x.x.x...........:.:...:...:...:.......:.:..:.x:.xx....x.--x.....:... 8M1I36M8D76M2I10M 100/130 76.9% 133/94230402 0.0% 11/130 8.5% -50409043 -43821359 +4869 chr4 + 190214555 24838988 24838987 24839099 112 ATTATACTAAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAAGAGAGAA chr4 + 94230402 75248034 75248033 75248145 75248034 75248033 75248145 112 ATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaaaagaaaagaaaA ..:.:.xx.x:..::..::...................x.x..............x.x.x.x.x.x.x.x.x.x.:.:.:.:...:.......:...:.:.::..:...:.. 112M 78/112 69.6% 112/94230402 0.0% 0/112 0.0% -50409046 -43821356 +5803 chr4 + 190214555 24839007 24839006 24839101 95 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAAGAGAGAAAA chr4 + 94230402 75248049 75248048 75248133 75248049 75248048 75248133 85 CTTCCTCTCTCTCTCTCTCTCT----------CACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaa ..::..................----------..................x.x.x.................:.:.:...:.......:...... 22M10D63M 75/85 88.2% 85/94230402 0.0% 10/85 11.8% -50409042 -43821360 +3102 chr4 + 190214555 24839009 24839008 24839044 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 12237705 NA +5384 chr4 + 190214555 24839009 24839008 24839100 92 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAAGAGAGAAA chr4 + 94230402 75248049 75248048 75248128 75248049 75248048 75248128 80 CTTCCTCTCTCTCTCTCTCT------------CTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaa ..::................------------.x..................x...............:...:.:.:.:.......:..... 20M12D60M 70/80 87.5% 80/94230402 0.0% 12/80 15.0% -50409040 -43821362 +3316 chr4 + 190214555 24839011 24839010 24839046 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 12237707 NA +3102 chr4 + 190214555 24839013 24839012 24839048 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 12237709 NA +3380 chr4 + 190214555 24844633 24844632 24844715 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACGCAGGAGGCTGAGGCAGTTGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:........x::::........x.xxx....x::.........:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -51188564 -43041838 +3106 chr4 + 190214555 24852278 24852277 24852333 56 AACACACCATACACACACACACACACACACACACACACACACACACACACACACTA chr4 + 94230402 87228029 87228028 87228084 87228029 87228028 87228084 56 AATACATCATATGCATGCTTGTACACACAAAAACACACACACAGCCACACACACTA ..:...:....::..::.x:::.......x.x...........xx........... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -62375751 -31854651 +3017 chr4 + 190214555 24853584 24853583 24853625 42 TTTCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAATTTA chr4 + 94230402 47022721 47022720 47022762 47022721 47022720 47022762 42 TTCCAATTAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGTA ..:...xx.............:.................x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -22169137 -72061265 +3094 chr4 + 190214555 24853588 24853587 24853624 37 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAATTT chr4 + 94230402 75300457 75300456 75300493 75300457 75300456 75300493 37 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATT .................:................x.. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -50446869 -43783533 +3248 chr4 + 190214555 24863163 24863162 24863234 72 TGCACCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGAGG-TGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x:.....:.........::::........x.xx:x...x::............:.-.xx:.....:.. 60M1I12M 52/72 72.2% 73/94230402 0.0% 1/72 1.4% -51170042 -43060360 +3575 chr4 + 190214555 24866795 24866794 24866869 75 AAAAAAAAAAATATACACACACACACACCCACACACACACACACACACACGTGCATATATATT--GATTGCTACAGG chr4 + 94230402 74526062 74526061 74526138 74526062 74526061 74526138 77 AAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGG .....x.xx..x..x.............x::x...:.....x.:.:.:....::....:....--.......x.... 63M2I12M 57/75 76.0% 77/94230402 0.0% 2/75 2.7% -49659267 -44571135 +3040 chr4 + 190214555 24871028 24871027 24871082 55 GAGTGAGACTCCCTCAAAAAAAAAAAAAAAAAAGATAAATTTCTACATTTTGTTT chr4 + 94230402 74401307 74401306 74401361 74401307 74401306 74401361 55 GAATAAGACACTCTCAATATGAAAAAGAAAAAAGATTAGTTTCTACTTTTCATTT ..:.:....x.:.....x.x:.....:.........x.:.......x...::... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -49530279 -44700123 +3234 chr4 + 190214555 24874226 24874225 24874299 74 TCTAGTCCTATTAGATTTGTTTTTTTTTTTTTTTGTTTTGTTTTTTTTTGTTTTTTTGCCTTAAAAGGATTCTG chr4 + 94230402 37134542 37134541 37134615 37134542 37134541 37134615 74 TCTAATAGTATTAAATCTTTTTTTCCTTTCTTTGGTTTTGTTTTCTTTTGTTCATGCATACAAAAACGTTTCTG ....:.xx.....:..:.x.....::...:...x..........:.......:x.x:::x:x....x.x..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -12260316 -81970086 +3133 chr4 + 190214555 24876275 24876274 24876343 69 GCATATACATACACACGTACACACACACACACACACACA--CACACACACACACACACACACACACACAGA chr4 + 94230402 54963194 54963193 54963264 54963194 54963193 54963264 71 GTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGA .:....x......x.:.:....x:.:.:...........--...:::.:.x..:.......:x:.:..:.. 39M2I30M 49/69 71.0% 71/94230402 0.0% 2/69 2.9% -30086919 -64143483 +3203 chr4 + 190214555 24877106 24877105 24877203 98 TTTCAAAATTTTTCTTGATGCTTTTCTGTGTTTTCTAA--GTTTCCAGAGTAAACCTATATGGTTTTTTGTCTGTTTGTTTGTTTGTTTGTTTGTTTTTT chr4 + 94230402 35944173 35944172 35944270 35944173 35944172 35944270 98 TTTCAACTTGTGTTTTGTTGTTTTTTTTT--TCCCCAACCATTTCCACTTTTAACCTATCTAGCTTTTTGTTTGTTTGTTTGTTTCTTTTCCTCCTGTTT ......xx.x.x.:...x..:....:.x.--.::.:..--:......xxx.x.......x.:.:.......:.............x...x::.x:.x... 29M2D7M2I60M 68/96 70.8% 98/94230402 0.0% 4/96 4.2% -11067067 -83163335 +3533 chr4 + 190214555 24891868 24891867 24891940 73 GTACATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCCCTTGAGCCCAGGAAGTTGAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..:..:x......:...........::........x:xx.x.:.x.x.....:.....:.:x..x:.....:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -51141336 -43089066 +3358 chr4 + 190214555 24931254 24931253 24931331 78 TATGCATATGTATCTGTGTATGTATATGTGTATTTATATATGTTTATTTATTTTAAAATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834610 85834533 85834532 85834610 78 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x...x...:.......:...:.:........x..:..x.:x..:x...x.x..x.:..:.x...::.:.:...:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -60903279 -33327123 +3426 chr4 + 190214555 24931264 24931263 24931321 58 TATCTGTGTATGTATATGTGTATTTATATATGTTTATTTATTTTAAAATATATATATA chr4 + 94230402 6200763 6200762 6200820 6200763 6200762 6200820 58 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATA ...:.x...:::...............:.......:.x......x.x.:...x..... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 18730501 NA +3032 chr4 + 190214555 24952584 24952583 24952664 81 AAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 22367296 22367295 22367376 22367296 22367295 22367376 81 AATCTCCAGCAGAAAAAAAAAAAAAAAATAGAAACAGAAAAGTATTTTCAAGTGTATAAATATTCATTTTCAAATAGATAT ..x.....x.xx................x.:...x.:....:x..x.x:.x:.:....x....x:..x.x:.x...x.... 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 2585288 NA +3257 chr4 + 190214555 24952594 24952593 24952655 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:......x.x......:.:..:...:.....x....::. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 23457600 NA +3121 chr4 + 190214555 24952602 24952601 24952655 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -65077474 -29152928 +3589 chr4 + 190214555 24952602 24952601 24952700 99 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAGTGGTAAAAGACACATAACAAAAAATTTACCCTCT chr4 + 94230402 51472490 51472489 51472588 51472490 51472489 51472588 99 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAAATTGCTCTCT ...x.x.x...::......:x...x...:.......x.:.:.......:x..:.:....:x:x.:x:..:.....x::x:..x..x...x..:.:.... 99M 65/99 65.7% 99/94230402 0.0% 0/99 0.0% -26519888 -67710514 +3496 chr4 + 190214555 24952604 24952603 24952659 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 23457604 NA +3114 chr4 + 190214555 24952608 24952607 24952675 68 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAGTGGTAAAAG chr4 + 94230402 51472490 51472489 51472557 51472490 51472489 51472557 68 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAG ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:...xx:.x..... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -26519882 -67710520 +3174 chr4 + 190214555 24952609 24952608 24952662 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -60595811 -33634591 +3388 chr4 + 190214555 24952611 24952610 24952664 54 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:x.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -60595809 -33634593 +3021 chr4 + 190214555 24975986 24975985 24976040 55 AAAAAGAAGGAGAAGGGAGAGGGAAAAGAGGGGAAGGGAGGGAAGGAGAGGGAGG chr4 + 94230402 15274122 15274121 15274176 15274122 15274121 15274176 55 AGAAGAGAGGAGAAGGGAATTAAAAATGGGGGAAAGGCAGGGAGGGAGGGGGAGG .:..:::...........:xx::...x.:...:....x.....:....:...... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 9701864 NA +3248 chr4 + 190214555 24975997 24975996 24976066 70 GAAGGGAGAGGGAAAAGAGGGGAAGGGAGGGAAGGAGAGGGAGGGGGGAAGGGAGGGAAGTGGAAAAGAG chr4 + 94230402 4113357 4113356 4113426 4113357 4113356 4113426 70 GAAAGGAGAAGTAAAGGGGGGGAAAGGAGGGGGGTGAAGAAAGAGAGAGAGAGCAGGGAGTGCAAGACAG ...:.....:.x...:.:......:......::.x::..::..:.:.::..:.x:..:....x..:.x.. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 20862640 NA +3585 chr4 + 190214555 24990777 24990776 24990858 82 GTGGTGGCACGTGCCTGCAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTGT----AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......:----...:.......:...::........x.xx.x...x.............:..x:xx:..:..... 6M1D7M4D64M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -51042424 -43187978 +3077 chr4 + 190214555 25011062 25011061 25011126 65 ACAGAGTAAGAGCCTGTCTCAAAAAAAAAAAAAATCAAAAAAACCAAAAAACAGAAAACAGCAAA chr4 + 94230402 48367429 48367428 48367493 48367429 48367428 48367493 65 ACAGAATAGAAGTCTATATGAGGGGAAAAAAGAAACAAACAAACCCAAACAAAAAAAACAACAAA .....:..::..:..:.x.x.::::......:..x....x.....x...x.x.:......:.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -23356367 -70874035 +3048 chr4 + 190214555 25014467 25014466 25014525 59 CCCACCCCCGCCCCCGCCAAAAAAAAGGAAGGAGAAGGAGGAAGAAGAGGAAGAGAAGG chr4 + 94230402 93281715 93281714 93281773 93281715 93281714 93281773 59 CCCCCCCCCCCCCCCACCAAAAAAAAAGGGTGAGGAGATGGCAGACGAGGAAAGCAGGG ...x.....x.....:..........:.::x...:..:x..x...x......::x.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -68267248 -25963154 +3279 chr4 + 190214555 25014816 25014815 25014878 63 GCAAGACCT-TGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGAAA chr4 + 94230402 76607298 76607297 76607361 76607298 76607297 76607361 64 GCAAAACCTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAA ....:....-..:........x....x.:..............:...:::.:xx.....x.:.. 9M1I54M 49/63 77.8% 64/94230402 0.0% 1/63 1.6% -51592482 -42637920 +3031 chr4 + 190214555 25014823 25014822 25014883 61 CTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGAAAAGAAA chr4 + 94230402 44890384 44890383 44890444 44890384 44890383 44890444 61 CTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAA ...x..:xx..::.............:.:.:.......::....:.x.x.x::........ 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -19875561 -74354841 +3011 chr4 + 190214555 25014833 25014832 25014902 70 AAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGAAAAGAAAATGATTGATGCATATATAT chr4 + 94230402 76841622 76841621 76841691 76841622 76841621 76841691 70 AAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGATTTTGCGGAGACAGAGATAT ..:.x..:..:::......:.:......:...........x.....:.:.xx.x::x..x:..x.x.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -51826789 -42403613 +3095 chr4 + 190214555 25014835 25014834 25014870 36 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:...............:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -50285621 -43944781 +3226 chr4 + 190214555 25014837 25014836 25014872 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................................:. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -50285619 -43944783 +3181 chr4 + 190214555 25014844 25014843 25014882 39 AAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGAAAAGAA chr4 + 94230402 47022729 47022728 47022767 47022729 47022728 47022767 39 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGTAGAGAA ...........:....................x.:.... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -22007885 -72222517 +3595 chr4 + 190214555 25018725 25018724 25018790 66 AGTGGTGTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGA chr4 + 94230402 76033200 76033199 76033263 76033200 76033199 76033263 64 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .......::..--......:.........::::........x.xx.x...x.............:. 11M2D53M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% -51014475 -43215927 +3687 chr4 + 190214555 25021791 25021790 25021873 83 CATGGTGGCACACGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACTCGCAAGGCTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--......:.........::.:........x.xx.x...x.:.......:.:x...x:.x:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -51011406 -43218996 +3789 chr4 + 190214555 25041219 25041218 25041361 143 ACCCAAGAGACTTTTAGCAGTAATTTTTCTCTTTTTCTCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTTTCTTCCTTCCTTTCCTTCTCTCTCTTTCTTT chr4 + 94230402 63697107 63697106 63697239 63697107 63697106 63697239 133 ACTCCACAGACTTT--------ATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTC--TTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x.x.......--------...::....:...:.xx:x.::.:....::..:.:..x...--....x....xx.:.:.x.:..xxx.....x:.....:x:xx.:::.:...:..:..:....:....::..:...x... 14M8D41M2D78M 85/133 63.9% 133/94230402 0.0% 10/133 7.5% -38655888 -55574514 +3048 chr4 + 190214555 25041237 25041236 25041330 94 AGTAATTTTTCTCTTTTTCTCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTT chr4 + 94230402 86491049 86491048 86491142 86491049 86491048 86491142 94 AACAATATGTTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCT .::...x.x.:..xx...:.::..::...:..:.xxxx....:::.:.x.x:.....:..........:....:::.::::.:.x..:....:. 94M 56/94 59.6% 94/94230402 0.0% 0/94 0.0% -61449812 -32780590 +3281 chr4 + 190214555 25041243 25041242 25041331 89 TTTTCTCTTTTTCTCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTTT chr4 + 94230402 48874904 48874903 48874992 48874904 48874903 48874992 89 TTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .....::...x......x.:.x....:...:x.::x..x...:..::.::.x...::...x.....:xx.x...x.x...::....:.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -23833661 -70396741 +5756 chr4 + 190214555 25041285 25041284 25041395 111 TCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTTTCTTCCTTCCTTTCCTTCTCTCTCTTTCTTTCTTGCTTTTTTTTTTTTGTTTTTTTTTTTGTTTT chr4 + 94230402 27163703 27163702 27163811 27163703 27163702 27163811 109 TCTACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCC--TCCctttctttctttctttctttcttttctttctttcttttctttctttcttt ...x:.:......x.........:::.x:....xx.:...:.:...:.........--...:.:...:............x.....:...:...x....:...:..x:... 56M2D53M 83/109 76.1% 109/94230402 0.0% 2/109 1.8% -2122418 -92107984 +3078 chr4 + 190214555 25089196 25089195 25089255 60 TGGAGCAAAGGATGACTACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGA chr4 + 94230402 51148360 51148359 51148419 51148360 51148359 51148419 60 TGTGGCAAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGA ..x:.....x.::.x:......:...:::..xx.x...............x...:..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -26059164 -68171238 +3825 chr4 + 190214555 25099118 25099117 25099284 167 AAAGAAGGAGAGAAAAAAGAAAGAGAGAA-----------AGAAAGAAGAGGAGAAAGAAGGAA-AAGGGAGAAAGAAAGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAGAGAAAGAA----AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 49044652 49044651 49044827 49044652 49044651 49044827 176 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGG-------GAAGAGTTAAAGAAAGAA-GAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA ...::.xx.:...:.......x:.....x-----------.......x:..x..x:.....x.x-...x.......:-------...:.:xx..........-....:.x:..:..x.....-..........x...:x...:..xx:.----.:...:..::..:.x:..x..x:.:x.x... 29M11I24M1I12M7D18M1D19M1I26M4I31M 112/159 70.4% 176/94230402 0.0% 25/159 15.7% -23945534 -70284868 +3132 chr4 + 190214555 25099139 25099138 25099271 133 AGAGAGAAAGAAAGAAGAGGAGAAAGAAGGAAAAGGGAGAAAGAA---------------------AGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 75241441 75241440 75241594 75241441 75241440 75241594 154 AGTGAGGCAAAAACAATAGCAATTGGTAGCAAAGGGTAGACAGAGGCTTTTAAATATTATGATGGTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ..x...:x.:...x..x..x.:xx:.x..x...:..x...x...:---------------------...x.x....x.:...xx.x...x.....::.....:..........:...x.:::xx.....:.:x:...x:x..:.:.x.:x:... 45M21I88M 85/133 63.9% 154/94230402 0.0% 21/133 15.8% -50142302 -44088100 +3089 chr4 + 190214555 25099204 25099203 25099267 64 AGAAAGAAAAGAAAAGAAAGAAAGAAAGAAA-----GAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 87343998 87343997 87344066 87343998 87343997 87344066 69 AGCAAAGAAGGATAAGAAAAACAGCAAGAAATGTTTGGGAGAGAAAGAGAAGGAAAAGAAAAGGGAAAA ..x..::..:..x......:.x..x......-----.::...:.:......:...........::..:. 31M5I33M 48/64 75.0% 69/94230402 0.0% 5/64 7.8% -62244794 -31985608 +3034 chr4 + 190214555 25099218 25099217 25099307 90 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAGAAAGCAAAAC chr4 + 94230402 38078778 38078777 38078867 38078778 38078777 38078867 90 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAACCCATAAGCATGAC ..x......:.::............:..:.:..::..x.x..:.:..xx:xx.x.:.::...x.:...:....:..xxx:x.....x:.. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% -12979560 -81250842 +3141 chr4 + 190214555 25099222 25099221 25099295 74 AGAAAGAAAGAAAGAAAG-AAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG ..:....:..:...:...-.....:x:..x...x.:..:....x::.x.x...x.x:............::.... 18M1I56M 53/74 71.6% 75/94230402 0.0% 1/74 1.4% -46501804 -47728598 +3435 chr4 + 190214555 25099226 25099225 25099301 76 AGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAGAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...x:.::..x...x...x.:..:....x::.x.x...x.x:..............:..:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -46501800 -47728602 +3076 chr4 + 190214555 25102953 25102952 25103035 83 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAGTGGAAAGATTTTTTTTTTTTTTTAATTACAGAGAT chr4 + 94230402 34738937 34738936 34739019 34738937 34738936 34739019 83 GAAAGGGAGGGGGTAGAGATGGAGGAGAGGAAGGTAGGAGCAGAGAAGTAAAGGGATTTATGTTTTTGTTTACATCTGGAAAT .:....:...::.x.::..x...:.::.......x....:x::.::...::.::.....x.x.....x....xx.x::..:.. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% -9635984 -84594418 +3466 chr4 + 190214555 25109476 25109475 25109552 77 GTCGCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAGCCTGGGAGGTGGAGGTTACAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.:....x......:...........::........x:xx.x...x.:.....:..::.:..x.xx:..:.::.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -50923725 -43306677 +3032 chr4 + 190214555 25156685 25156684 25156758 74 GCAACAGAGCTAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTCTTTTCAAAAGCCACTCA chr4 + 94230402 88382708 88382707 88382777 88382708 88382707 88382777 70 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCA----CAATAACCACACA ....x:....x....xx.x.........::.:..............:x.x.....:x----...x.:....x.. 57M4D13M 53/70 75.7% 70/94230402 0.0% 4/70 5.7% -63226023 -31004379 +3034 chr4 + 190214555 25195914 25195913 25195955 42 TCTCAAAAAAAAAAAAAAAAAAAAAAAATGAGAATCAACTTA chr4 + 94230402 15362533 15362532 15362574 15362533 15362532 15362574 42 TTTCAGAAAAAAAAAAAAGAAAAAAAAGTGAAAATAAACTTA .:...:............:........:...:...x...... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 9833381 NA +4100 chr4 + 190214555 25204901 25204900 25204985 85 TGCATGGTGGTGCATACCTATAGTTCCAGCTACTTGGGATGCTGAGGTGGGAGGACCACTTGAGCCCAGGAGGTCTAGGCTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::........--.x.:................::.x......x:xx.x.:.x.......:.....:..x.:.:.....:.. 14M2D69M 62/83 74.7% 83/94230402 0.0% 2/83 2.4% -50828294 -43402108 +3401 chr4 + 190214555 25205044 25205043 25205159 116 CTTTCTCTTTATATATATACATGTACACACACACACATATATACACACACACACACATACACACACACACACACACACACACATATATATATATATTTTTTTTTTTTAAGTAGAAC chr4 + 94230402 54963182 54963181 54963288 54963182 54963181 54963288 107 CTTTTTTAGTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGA---------ATTCTTTCTTTACATACATGGAAC ....:.:xx.x.:.....x...::.x.::.....x:.....:.........xx...:.:.:.x..:.......:x:.:..:x.---------..x:...:...x:x..x:.:.... 83M9D24M 70/107 65.4% 107/94230402 0.0% 9/107 8.4% -29758138 -64472264 +3562 chr4 + 190214555 25205060 25205059 25205139 80 ATACATGTACACACACACACATATATACACACACACACACATACACACACACACACACA-----CACACACATATATATATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..:::....::........:x...:x...:.:::...................x:x.x.-----:...::x...x.......... 59M5I21M 58/80 72.5% 85/94230402 0.0% 5/80 6.2% 1957338 NA +3313 chr4 + 190214555 25205076 25205075 25205144 69 ACACATATATACACACACACACACATACACACACACACACACACACACACATATATATATATATTTTTT chr4 + 94230402 74526066 74526065 74526134 74526066 74526065 74526134 69 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTT ....xx.x..x...............:x...:.....x.:.:.:..::.:....:...x..x...x:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -49320990 -44909412 +3275 chr4 + 190214555 25209511 25209510 25209593 83 CATGGTGGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCGCTTGAGCCTGGGAGGTGGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x....:.:...........::........x.xx.xx..x.:.....:..::.:..x.xx...:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -50823686 -43406716 +3020 chr4 + 190214555 25259765 25259764 25259830 66 GGCCACATTCAAAGCCATCCTGGGCAGCATGCGGCCTGCAGGCCACGGGTTGGATAAGCTTGATGT chr4 + 94230402 77278525 77278524 77278590 77278525 77278524 77278590 66 GGCCACAGTGGGAGCTTTGCTAGGCTGCATGGAGTCTGCAGTCTGTGGGTTGGATGTGCCTGCTGT .......x.x::...:x.x..:...x.....x:.:......x.:::.........:x..:..x... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -52018760 -42211642 +3020 chr4 + 190214555 25259765 25259764 25259830 66 GGCCACATTCAAAGCCATCCTGGGCAGCATGCGGCCTGCAGGCCACGGGTTGGATAAGCTTGATGT chr4 + 94230402 77276641 77276640 77276706 77276641 77276640 77276706 66 GGCCACAGTGGGAGCTTTGCTAGGCTGCATGGAGTCTGCAGTCTGTGGGTTGGATGTGCCTGCTGT .......x.x::...:x.x..:...x.....x:.:......x.:::.........:x..:..x... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -52016876 -42213526 +3036 chr4 + 190214555 25260623 25260622 25260662 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 20851541 NA +3005 chr4 + 190214555 25260625 25260624 25260665 41 TATATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.............:.........x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 20851543 NA +3415 chr4 + 190214555 25272531 25272530 25272624 94 GTGGCTCATGGCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGTTTAAGCCCAAGAGTTCGAGGCTGTAGTACACTGTGATGACA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA---TGATGCCA ....:x..:.--...x..:...........::........x.xx.x.:.x:::..:.:....::..:.:x:........x...---.....x.. 10M2D71M3D8M 63/89 70.8% 89/94230402 0.0% 5/89 5.6% -50760670 -43469732 +3111 chr4 + 190214555 25290302 25290301 25290341 40 ATGCTGTTGTTGTTGTTGTTTTCTGTTTGCTTGTTTCTCT chr4 + 94230402 59675244 59675243 59675283 59675244 59675243 59675283 40 ATACTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTT ..:...................:......:......:.:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -34384942 -59845460 +3726 chr4 + 190214555 25291416 25291415 25291554 139 TTAGGCGACAACTGGGAAGATTGTAACCCCATAGTACTCAACCAATGAGGAACTGGGGGAGGGA---------CTTGCGTGCTAGGAGATAAATTACCTGTTGTGAC------TGCCGTGGATGTGCCTGCTCACCAGACACCCAATCTTGCAA chr4 + 94230402 24042385 24042384 24042533 24042385 24042384 24042533 149 TTAGTTGAGCATCGGGAAGATTGTGAACCTAAAGTACTCAGCCAATGAGGAACCAGGGAAGAAAGAGATAAGCGTCAAGTAATAGGGCATAAA-----AGGTGTAACACTGTTTTCCGCATGTGCTCCTGCTTGTGGGAAGCCCACCACTGCAA ....x:..xx.::...........:.x..:.x........:............::...:..::.---------x.::x..:x....:x.....-----x.x...:..------.x...::x:..:x......:::x:..x:....x:x:..... 64M9I20M5D9M6I41M 89/134 66.4% 149/94230402 0.0% 20/134 14.9% 1249031 NA +3302 chr4 + 190214555 25291972 25291971 25292060 89 ACAGTCATTTCGTTGTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTGAGGTAGAGTCTCAA---TTTGTCACCCA chr4 + 94230402 68489661 68489660 68489752 68489661 68489660 68489752 92 ATACTTGTTTTGACTTTTTTTTTTTTTGGTTCTTTGTTTGTTTGGCTTTGCTTTTGGTTTTTAGCAGTAAGGCCACAGGCCTTTCTTACCTA .:.x.::...:.x:x......x..x...x..x............x:....:.....x.....x.x:...::.:.x..:---...x.:...:. 78M3I11M 62/89 69.7% 92/94230402 0.0% 3/89 3.4% -43197689 -51032713 +3194 chr4 + 190214555 25291987 25291986 25292024 38 TTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTGTTT chr4 + 94230402 56598575 56598574 56598612 56598575 56598574 56598612 38 TTTTTTGTTGTTGTTCTTTTGTTTGTTTGTTTTTGTTT ...............:x..................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -31306588 -62923814 +3259 chr4 + 190214555 25293039 25293038 25293087 49 GAAGTCCCCTTCTCAAAAACAAAACAAAACAAAACAAAAAACCCACAAA chr4 + 94230402 6760471 6760470 6760519 6760471 6760470 6760519 49 GACATCTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAA ..x:..:.::.......................xx.........x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 18532568 NA +3124 chr4 + 190214555 25309564 25309563 25309646 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCCTGAACCTGGGAGGTGGCGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x.xx.x...x::.:......::.:..x.xxx..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -50723633 -43506769 +3481 chr4 + 190214555 25407466 25407465 25407531 66 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAACTACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x....:.:...........::........x.xx.x:..x:............:.. 6M2D58M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% -50625735 -43604667 +3597 chr4 + 190214555 25407755 25407754 25407837 83 CATTGTGGCTCATGCCTATAATCCCAGCTACTCGAGAGGCTGAGGCATGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....:x..:.--.:..:.:.........:..:........x.x..x...x::...........:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -50625442 -43604960 +3115 chr4 + 190214555 25411630 25411629 25411688 59 AGCAAGTTGCCTAACCTCTCTGTGCCATAGTTTCTCATCTGTAAAATGAAGATGGTAAT chr4 + 94230402 87144314 87144313 87144372 87144314 87144313 87144372 59 AGCAAGTTGTGTAGTTTATCTGTGCCACTGTTCCCCATCTGTAAAGTCGGGAGGATAAT .........:x..:::.x.........:x...:.:..........:.x::..x.:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -61732684 -32497718 +3198 chr4 + 190214555 25422747 25422746 25422841 95 ATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTATACATATATATATATATCCTCGTTCTCTTGGGATGGAAAGTT chr4 + 94230402 85834534 85834533 85834628 85834534 85834533 85834628 95 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATT ..x:..x.....x.................:.xx:...:x:::..:.......x.:.:..:.x...::.:x.x:::x.x.x...xx...::.:.. 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% -60411787 -33818615 +3137 chr4 + 190214555 25422749 25422748 25422815 67 ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTATACATATATATATATA chr4 + 94230402 85834538 85834537 85834604 85834538 85834537 85834604 67 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA ..x.:...x.................:.xx:...:x.:..::....:.:x......:.x...::.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -60411789 -33818613 +3026 chr4 + 190214555 25422752 25422751 25422814 63 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTATACATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x::.x.....x.................:.xx.....x::..::...::..x...:..:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -60411781 -33818621 +3121 chr4 + 190214555 25422755 25422754 25422814 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTATACATATATATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............::........xx...:.:..::..:.::...::...:::.x.:.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -53842764 -40387638 +3296 chr4 + 190214555 25422757 25422756 25422824 68 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTATACATATATATATATATCCTCGTTC chr4 + 94230402 79265519 79265518 79265586 79265519 79265518 79265586 68 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCC .............::........xx...:...::...:.:..:.:..:.:::.x.:....::x:..:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -53842762 -40387640 +3403 chr4 + 190214555 25435282 25435281 25435348 67 TGTAGTTCTAGCTACTTGGGAGGATGAGCCACAAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.........::...x......x::x...x..........::.:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -50597929 -43632473 +3356 chr4 + 190214555 25450273 25450272 25450366 94 CATGGTGGCACATGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGAACGTTTGATCCCAGGAGGCAGAGGTTGTGGTAAGCCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGAT ..::....::..:.--.:....:...........::........x.xx.x.:.:.::....x.....:..x:xx:..:...:.x.---...... 14M2D69M3D6M 62/89 69.7% 89/94230402 0.0% 5/89 5.6% -50582924 -43647478 +5943 chr4 + 190214555 25451457 25451456 25451618 162 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAGGAAGGGAGGGAGGGAGAAAAAGAGGGGCA---GAGAGAGACAAAAAAAGAAAAAGAGAGGAAGACAGAAAGGAAGAAAGAAAGAGAGGAAGAGAA--------GGAAAGAGAGAAATAAAGAAAAAGA chr4 + 94230402 1500702 1500701 1500874 1500702 1500701 1500874 173 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaaga .....::.:...:.:x..::.....:.:x..:..:.:.......::..:x::.::.:.......x..:...xx.---...:.::.:...::...:....x:..::..:.x.::..:...:.x:....x...:..:..:..--------..:.:.....:..x::::....... 74M3I63M8I25M 104/162 64.2% 173/94230402 0.0% 11/162 6.8% 23950755 NA +3217 chr4 + 190214555 25451738 25451737 25451883 146 AATAAATAAATAAATAAAATGAAAGAAGGAAGGAAAAGGGAAGAGAGAGGAAAAGAAAGAAGCAAGGAAAAGAGGAAGAAAGGAAGACAGAGAAAAGGACAGAAAGAAAGAGAAAAAAGGAAGAGAAGAAAGAGAAAAAAAGAACA chr4 + 94230402 69368735 69368734 69368879 69368735 69368734 69368879 145 AATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATGGTTTGTACCAGGGCCAGTGGCATAACGAAAGCAAAAGAGAACAGATTA-AAAGAAAATAACTGAACA ...:..x...x.:.x....x::.:...:.::...:..x..x:...:..:....::..x..x::.:...x..::::..x::xxx:x:x...:.xx.:x.:..x..x.....x:...:.:::x...xx.-.....:..x..xx..... 127M1D18M 84/145 57.9% 145/94230402 0.0% 1/145 0.7% -43916997 -50313405 +3276 chr4 + 190214555 25451753 25451752 25451889 137 AAAATGAAAGAAGGAAGGAAAAGGGAAGAGAGAGGAAA-----AGAAAGAAGCAAGGAAAAGAGGAA-GAAAGGAAGACAGAGAAAA-------------GGACAGAAAGAAAGAGAAAAAAGGAAGAGAAGAAAGAGAAAAAAAGAACAAAGGAA chr4 + 94230402 69368725 69368724 69368877 69368725 69368724 69368877 153 AAGCTGGATGAATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATGGTTTGTACCAGGGCCAGTGGCATAACG---AAAGCAAAAGAGAACAGATTAAAAGAAAATAACTGAA ..:x..:.x...x....:.....:...:..........-----....x.:x.x.:....:.:..:..-..x.x:::..:.:......-------------..x...x::x.x.:x.---....x..:...::.x...xx....:.:..:..xx... 38M5I24M1I19M13I16M3D37M 91/134 67.9% 153/94230402 0.0% 22/134 16.4% -43916972 -50313430 +3910 chr4 + 190214555 25451800 25451799 25451946 147 CAAGGAAAAGAGGAAGAAAGGAAGACAGAGAAAAGGACAGAAAGAAAGAGAAAAAAGGAAGAGAAGAAAGAGA-----AAAAAAGAACAAAGGAAGGAAGAAAGAGAGAGAGAAAGAGAAAGAA-GGGAATAAAGGAAGAAAGGAGGACAGAA chr4 + 94230402 84536567 84536566 84536719 84536567 84536566 84536719 153 CAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAA .....:....:.:......::..x.xx:.:..x....x:x:......:.::::.....:....:.::...xx.-----x....xx.:..:xx....x.xxx......:...x...x....:.:.-x..:.x:...::.xx...:...xx.:.. 73M5I46M1I28M 93/147 63.3% 153/94230402 0.0% 6/147 4.1% -59084767 -35145635 +3286 chr4 + 190214555 25457797 25457796 25457857 61 CCTCTCATGTTTTTTGTTTTTTTTTTGTCTTTTTTTTTGTTGTTGTTTGTTTGTTTTTTGT chr4 + 94230402 89452744 89452743 89452804 89452744 89452743 89452804 61 CTTCTTGTGTTTTGTTTTGCTTTTTTATTTGTTTTGTCGTTGTTATCTGTTTGTTTTTAGT .:...::......x.x..x:......:.:.x....x.:......:.:...........x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -63994947 -30235455 +3034 chr4 + 190214555 25457814 25457813 25457856 43 TTTTTTTTTGTCTTTTTTTTTGTTGTTGTTTGTTTGTTTTTTG chr4 + 94230402 27444619 27444618 27444661 27444619 27444618 27444661 43 TTGTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG ..x...xx...:......x........................ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -1986805 -92243597 +3356 chr4 + 190214555 25463757 25463756 25463834 78 TGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACCTGAACCTGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...:.--....:.:...........::........x.xx.x...x...:......::.:..x:xx:..:...:. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% -50569445 -43660957 +3285 chr4 + 190214555 25466993 25466992 25467070 78 CCTGGGCGACAGAGGGAGACCCTGTCTCAAAACAAACAAACAAACAACAACAACAAAAAAAAACACAAAGAAACCCAA chr4 + 94230402 23194067 23194066 23194144 23194067 23194066 23194144 78 CCTAGACAAAAATGAGAAATGTGATTTTCAGTTAAACAAACAAGCAACAAAAACAAAACAAAGAACAAAAAAACCCGA ...:.:.:.x.:x.:..:.:x:x:.:.:x.:x:..........:......x.......x...:x.....:......:. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 2272926 NA +3066 chr4 + 190214555 25467021 25467020 25467053 33 AAAACAAACAAACAAACAACAACAACAAAAAAA chr4 + 94230402 81996046 81996045 81996078 81996046 81996045 81996078 33 AAAACAAACAAACAAACAACAACAACAAAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -56529025 -37701377 +3410 chr4 + 190214555 25494828 25494827 25494948 121 GAAAAAAAAGAAAGAAAGGAAAGAAAGGAAAGAAAGGAAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAA chr4 + 94230402 69368741 69368740 69368868 69368741 69368740 69368868 128 GAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATGGTTTGTACCAGGGCCAGTGGCATAACGAAAGCAAAAGAGAACAGATTAAAAGAAA ......:.::.....:.......:::.::..x::x...:.:...:......x..x.x.::..x.:.:.:..x.:-------x..::xx.:x.:x.x..x.....x......:.:x...xx::...... 74M7I47M 75/121 62.0% 128/94230402 0.0% 7/121 5.8% -43873913 -50356489 +3288 chr4 + 190214555 25494871 25494870 25494962 92 GGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAAGGGGGAGGGAGGGA chr4 + 94230402 58935722 58935721 58935813 58935722 58935721 58935813 92 GAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAA .:.x..:......:x.:x:.xx..:....:.x::.:..:...:..:.x.::..::x....:.........x:.x.x.....::.::....:. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% -33440851 -60789551 +3153 chr4 + 190214555 25494881 25494880 25494937 57 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAG chr4 + 94230402 83419839 83419838 83419895 83419839 83419838 83419895 57 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAAG ........x...:.:x..x::....:x....x...x..:.............:.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -57924958 -36305444 +3022 chr4 + 190214555 25494913 25494912 25494974 62 AAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAAGGGGGAGGGAGGGAGGAAGGAAGAGG chr4 + 94230402 66803525 66803524 66803586 66803525 66803524 66803586 62 AAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGG ..:x.:...........:.........:::..:::.....x..x::.x:....::...x... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -41308612 -52921790 +3096 chr4 + 190214555 25495684 25495683 25495753 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -50537513 -43692889 +3321 chr4 + 190214555 25495959 25495958 25496030 72 TATCATCTCATTTCATTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTTTTTG chr4 + 94230402 67756847 67756846 67756918 67756847 67756846 67756918 72 TATCATCTCTTTACAATTCCTTCCTTCCTTTCCCCTTTTCACTTTTTCCTCCTTTCAAATGTTCTTTTCCTG .........x..x..x..............:.::.:..:.x:::..:.:.....:.xxx:x.......::.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -42260888 -51969514 +3498 chr4 + 190214555 25496913 25496912 25496992 80 TTGACCTGCTCTGCTAT-TTCCTTTTCTGTCCCTCTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 61949709 61949708 61949789 61949709 61949708 61949789 81 TTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTT ....x..x:x.......-:......:x.:::..x::...x......:.xx.x...::.......:...:............ 17M1I63M 58/80 72.5% 81/94230402 0.0% 1/80 1.2% -36452796 -57777606 +3863 chr4 + 190214555 25496918 25496917 25496989 72 CTGCTCTGCTATTTCCTTTTCTGTCCCT-CTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 69568201 69568200 69568273 69568201 69568200 69568273 73 CTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ......x.:........::.:....:..-....x.:.......:.:x...:xx.::................. 28M1I44M 56/72 77.8% 73/94230402 0.0% 1/72 1.4% -44071283 -50159119 +3412 chr4 + 190214555 25496928 25496927 25497042 115 ATTTCCTTTTCTGTCCCTCTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTAGATTAGGTCTTACTCCACCACCAAGGCTGTGTACAGTGCCGCTGTGTA chr4 + 94230402 87898163 87898162 87898260 87898163 87898162 87898260 98 ATTTTCATTTCTGTCTCATGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTTAAG--------------GCCACTGAGGCTG---ACTGTGGCTTTGTGCA ....:.x........:.x:x..x:x.::..x..x....x.:........:.....:....:......::--------------:....::......---..x...x.x:....:. 69M14D13M3D16M 70/98 71.4% 98/94230402 0.0% 17/98 17.3% -62401235 -31829167 +3175 chr4 + 190214555 25496935 25496934 25496995 61 TTTCTGTCCCTCTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTAG chr4 + 94230402 86518997 86518996 86519056 86518997 86518996 86519056 60 TTTCT-TCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAG .....-......:..:.:.:x....xx..:.......:.......:.....:.x:...... 5M1D55M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% -61022062 -33208340 +3097 chr4 + 190214555 25496940 25496939 25497013 74 GTCCCTCTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTAGATTAGGTCTTACTCCACC chr4 + 94230402 56907958 56907957 56908031 56907958 56907957 56908031 74 GTCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTCACC ....x:.::..::..:.::x.:....:...:................:.....x:x.xx:.x.:..x:.:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -31411018 -62819384 +3707 chr4 + 190214555 25506943 25506942 25507025 83 CATGGTGGCGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--.:..:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -50526254 -43704148 +3367 chr4 + 190214555 25513837 25513836 25513902 66 ACATTGTAACATACTTATTCAAATATTTTCTTTTTTCTTTTCTTTTCTTTTTTTTTTTGAGACAGA chr4 + 94230402 33874295 33874294 33874360 33874295 33874294 33874360 66 ACATTTTTTCATACTTATTCAAATCTATTGTTTTTCTTTTTTCTTGTTTTTTTCCTTTAAGGCAAA .....x.xx...............x.x..x.....::....::..x:......::...:..:..:. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -8360458 -85869944 +3157 chr4 + 190214555 25516966 25516965 25517125 160 TAAGCACT--CATTTCTTTCTTTCTTTCTCTCTT--------------------------------TCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTT chr4 + 94230402 33934103 33934102 33934296 33934103 33934102 33934296 194 TGAGCACTGTCATTTCCTTACTTATTTCTCCATTGGTTAGGTTAATCTGAAAATTTATCCAAAGTGTCTGCTGTTTATCCTTCTATTTACTTGCTTTTTTTTCTCATGTAGTGTTATCTTTTTTTTTTCCCTTCTTTCTTTCGTGCATGTTCAGAGCTGTTTAATAACTTTTCTCCTTAATGTCTTTTTCCTTT .:......--......:..x:..x......:x..--------------------------------...x:.x.:.x..:....x..:x:..x:...:...::.:x.x.xx.x:.x.....:...:..:.:...........x.x.x.x:.:xxxx:.x...xx.xx:..:.:.....xx.x.......::... 8M2I24M32I128M 102/160 63.8% 194/94230402 0.0% 34/160 21.2% -8417137 -85813265 +3847 chr4 + 190214555 25516969 25516968 25517104 136 GCACTCATTTCTTTCTTT---CTTTCTCTCTTTCTTTTTTCTTTCTTTCTTTT-------CTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCCTTTCTTTCCTTCTTTCTT chr4 + 94230402 50176280 50176279 50176426 50176280 50176279 50176426 147 GCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT ..x...x......:....---.x::.x..:..x.x..x........x.::...-------:....x.:.............:xxxx.::x.:.:.::x:......x::.:...::.........-:...x.....:x.x.x.::... 18M3I32M7I64M1I22M 91/136 66.9% 147/94230402 0.0% 11/136 8.1% -24659311 -69571091 +3955 chr4 + 190214555 25516984 25516983 25517121 138 TTTCTTTCTCTCTTTCTTTTTT--CTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------------TCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTT chr4 + 94230402 72471361 72471360 72471512 72471361 72471360 72471512 152 TTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTCCCTTTCTGACTCCTTT ...::....xxx......x...--...:..:::..............:......xx:.x.x.::...:x.:x..x.x.x:...:x.x...x:..x.x.x...------------:...:....:....x:.:.:.:.......xx..::... 22M2I78M12I38M 92/138 66.7% 152/94230402 0.0% 14/138 10.1% -46954377 -47276025 +3342 chr4 + 190214555 25516987 25516986 25517129 143 CTTTCTCTCTTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTTTTT chr4 + 94230402 19215409 19215408 19215551 19215409 19215408 19215551 143 CCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTT .:::...:.:::.:::...:...:...:.xx.::.xx.xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x..x.:....xxxx...:::..xx:..:.....x::..x.x..... 143M 82/143 57.3% 143/94230402 0.0% 0/143 0.0% 6301578 NA +3877 chr4 + 190214555 25516991 25516990 25517097 107 CTCTCTTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTT chr4 + 94230402 89201214 89201213 89201322 89201214 89201213 89201322 109 CTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTT .....x.x.....xx..x.:.........:...:...:....xxx::x.x....::..x..--:..:...::....:...:..:x.x:.:...:.....x...::x... 61M2I46M 72/107 67.3% 109/94230402 0.0% 2/107 1.9% -63684223 -30546179 +3376 chr4 + 190214555 25517004 25517003 25517132 129 TTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-------CTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTTTTTTGA chr4 + 94230402 37898147 37898146 37898274 37898147 37898146 37898274 128 TTACTTCTGTCTGCTTTTCT-TTTTCTTTGTTTCTATCTTTC-------ATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTTTAA ..x:....x...x:.:..:.-........x.....x......-------x...x.:..:.x:...xx....x.::..-------..x.:x.......xx.x.......x:.x:.x.:.......x....x....:. 20M1D21M7D28M7I52M 86/121 71.1% 128/94230402 0.0% 15/121 12.4% -12381143 -81849259 +4099 chr4 + 190214555 25517011 25517010 25517156 146 TTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-------TTTCTTTCTTTCTTTCT--------TTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTC--------CTTTCTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTTGTTGCCC chr4 + 94230402 21408809 21408808 21408973 21408809 21408808 21408973 165 TTTATTTTCCTTTTTACTGGTTCTTTCTAT-TTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCCCAGACGA---CTTCCTCATGCTGCCC ...x.....:...:.x:.xx........x.-...x.:.:........-------..:.:::.:.:..::..--------..........:..........::...xx:...--------::.x....::..:..x::...:::x.....:---...x...x..:..... 30M1D16M7I17M8I32M8I31M3D16M 100/142 70.4% 165/94230402 0.0% 27/142 19.0% 4108202 NA +3306 chr4 + 190214555 25517011 25517010 25517080 70 TTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ...........x..............:..:.::.::.x..::--..:...x.:x..::....x...x..... 42M2I28M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% -43646336 -50584066 +3606 chr4 + 190214555 25517017 25517016 25517124 108 TTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--------------CTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....--------------....:.:x.xx.::..::..:.::.....:.......:......x... 60M14I48M 71/108 65.7% 122/94230402 0.0% 14/108 13.0% -38180101 -56050301 +3878 chr4 + 190214555 25517021 25517020 25517161 141 TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTT---TTTTTTTTTGAGACGGAGTCTTG----CTCTTGTTGCCCAGGCT chr4 + 94230402 63697118 63697117 63697274 63697118 63697117 63697274 157 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAAAAGCTGTAGACAATTGTTGCCTATACT ...x..::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....---------....x....:.:x.xx.......:...::.....::...:.---.....x...:...x.:.:xx:..----.xx........:.x:.. 60M9I41M3I23M4I17M 93/141 66.0% 157/94230402 0.0% 16/141 11.3% -38180097 -56050305 +3002 chr4 + 190214555 25517060 25517059 25517126 67 TCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTT chr4 + 94230402 72383371 72383370 72383437 72383371 72383370 72383437 67 TCCCTCTCTCTTTTTCCCTTTCATCCCTTTCCTCTCCTTTCTCTGTGGTGGGTTTTTTTTTTTTTTT ..::...:.....:.::.....x.:......:.::.:.:.:...x.xx.xxx...:........... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -46866311 -47364091 +3801 chr4 + 190214555 25520234 25520233 25520307 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTAAACCCAGGAAGCACAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.x:.x...x::...:.......:.:x:x::..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -50512970 -43717432 +3322 chr4 + 190214555 25521673 25521672 25521773 101 CATGGTGGCAGGCTCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGATAGAGGATCTGGGTAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:--..x.x....:.:...........::.:......x.xx.x...x.:...........:..x.xx:..x.x.:.------..x..x...... 9M2D72M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% -50511524 -43718878 +3132 chr4 + 190214555 25527442 25527441 25527492 51 ACCTTGCCTCTATTAAAAAAACAAACAAACAAACAAACAAAACTCCTATAA chr4 + 94230402 42933544 42933543 42933594 42933544 42933543 42933594 51 ACCCTATGTTTAAAAAAAAAACAAACAAACAAACAAAAAAAACTTCTGTAA ...:.::x.:..xx.......................x......:..:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -17406102 -76824300 +3089 chr4 + 190214555 25547762 25547761 25547815 54 CTGTGATTCTTTTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 62408951 62408950 62409004 62408951 62408950 62409004 54 CTGTGGTTCTTTGTTTTGTGTTTTCTCCTTTTTTTTATTTTTCTTTTCTGTGAG .....:......x...:x.x......:::.......x.....:....:.x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -36861189 -57369213 +3696 chr4 + 190214555 25553373 25553372 25553474 102 ACTTTTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTC chr4 + 94230402 50176314 50176313 50176415 50176314 50176313 50176415 102 ATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .:.x........x.:.:..x:x...x..:..x::.............:xxxx.::x.:.:.::x:......x::.:...::.........::.:.x...... 102M 65/102 63.7% 102/94230402 0.0% 0/102 0.0% -24622941 -69607461 +4381 chr4 + 190214555 25553390 25553389 25553535 146 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTT----CCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATC-CGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT-TCTTTCTCCTCCATTCTT .....x...:x..x:::.:.......:....x.:-.x::.x:.:..x.x..x..::..::x......x.x.::x...:.x...............:----..:x...:..:x...::..x.:..:......-.:.:.:..:.:.x..... 34M1D61M4I31M1D18M 95/144 66.0% 148/94230402 0.0% 6/144 4.2% -24622877 -69607525 +4497 chr4 + 190214555 25553414 25553413 25553563 150 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCCTTCCTTCCTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTATA chr4 + 94230402 50176267 50176266 50176420 50176267 50176266 50176420 154 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATA .....x...:x..x:::.:.......:....x.::x:::x:..:.x:x..x........x:.:.:.x.x..:x:..::x..:............:----.::x.:.:.::x:......x::.:...::.........::.:.x.....:x:... 95M4I55M 91/150 60.7% 154/94230402 0.0% 4/150 2.7% -24622853 -69607549 +3352 chr4 + 190214555 25553433 25553432 25553545 113 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCT--TTCTTTCCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCT------TTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 21704056 21704055 21704174 21704056 21704055 21704174 119 CTGTCTCTCTTCTTTTTTGCAGCTAGTTCCTCTTCTTTTTTCTTTCTGATTCTTTCAGACTGT--TTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTTC ..x...:....::...:.x:xx:.xx...:.:......:........--.......xxx.:x.--.:..:..x...x:...x..:...------....x.:...:.:......:x.:.... 47M2I14M2D23M6I27M 77/111 69.4% 119/94230402 0.0% 10/111 9.0% 3849377 NA +3227 chr4 + 190214555 25553461 25553460 25553583 123 CTTTTTCTTTCTTCTTTCTTTCTTTCCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTATAATTTCTCTAGAAGAAACTCA chr4 + 94230402 61949701 61949700 61949817 61949701 61949700 61949817 117 CCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTA------CTTTGAAGGACACTCA .:........xxx..:.x:.x..x.x..:.:...x.x:.:.x.:...x:.:.:.::xx.x...::...............:...:....xx.xxx:..:..------..:.::.:..x..... 101M6D16M 74/117 63.2% 117/94230402 0.0% 6/117 5.1% -36396240 -57834162 +3271 chr4 + 190214555 25557780 25557779 25557857 78 AATAAATAAATAAATAAAAATAACA-------TATAATCCATAATCACTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTGAGAC chr4 + 94230402 55680030 55680029 55680114 55680030 55680029 55680114 85 AACATATATACTGATGAAAACAACTGGCAATTTTTAATTCACATCTACTTTTCTATTCCCTCTTTTTTTTTTTTTTTTTTGCAAC ..:.x...x.:x:..:....:...x-------.x....:..:.x::........x...::.....:...............x:.. 25M7I53M 57/78 73.1% 85/94230402 0.0% 7/78 9.0% -30122250 -64108152 +3200 chr4 + 190214555 25561627 25561626 25561694 68 TATTTTTTAATTTTATT----TTTAAATTTATTTTATTTTTAAATTTTATTTTATTTATTTATTTATTTATT chr4 + 94230402 84644773 84644772 84644844 84644773 84644772 84644844 72 TGTTACTTAATCTCACTATATTGTAAATTTGTATGATCTTTCCATTTCGTTTCATTTATTTATTTATTTATT .:..x:.....:.:.:.----.x.......:.x.x..:...xx....::...:................... 17M4I51M 52/68 76.5% 72/94230402 0.0% 4/68 5.9% -59083146 -35147256 +3035 chr4 + 190214555 25566121 25566120 25566177 57 CCTGTCTCAAAAAAAAAAAAAGAAGGAAGGAAGGAAAGAAAGAAGCTAAAGAAAAAT chr4 + 94230402 50232354 50232353 50232410 50232354 50232353 50232410 57 CCTATTACAAAAAAAAAAAAAAAAGGAAGGGGGGGGGCAGAGGGGCTGGAAAGAAAT ...:.:x..............:........::..:::x.:..::...::.:.:.... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% -24666233 -69564169 +3008 chr4 + 190214555 25571236 25571235 25571269 34 CTTTTTTTTTTTTTTTTTTTTTTAAATAGAGATG chr4 + 94230402 57916782 57916781 57916815 57916782 57916781 57916815 34 CTTTTTTTTTTTCTTTTTTTTTTAAATAGAGATG ............:..................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -32345546 -61884856 +3253 chr4 + 190214555 25577968 25577967 25578064 97 GTGGTGCACACCTGTAGTCTCAGCTACTTGGGAGGTTGAGGCAGGAGAACTGCTTGGATCCAGGAGGCAGAGGTTACAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .........:--......::..........::...:....x.xx.x...x::....:.:....:..x:xx:..:.::..------:.x...:..... 10M2D67M6D12M 62/89 69.7% 89/94230402 0.0% 8/89 9.0% -50455233 -43775169 +3452 chr4 + 190214555 25593396 25593395 25593477 82 GTGGTGGCACGTATCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGT----GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-.....----...:.:...........::........x:xx.x...x...........:.:..x.xx:..:..:.. 6M1D5M4D66M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% -50439805 -43790597 +3343 chr4 + 190214555 25598023 25598022 25598088 66 CTCAAAACACACACACACACACACACCCACACACACACACACGCACATTTTCAGCATTTTATTCTC chr4 + 94230402 4929428 4929427 4929493 4929428 4929427 4929493 66 CTCAAAACACCCATATGCACACACACGCACAAACACACCATCACACAGTCTCAGCAATCCACTGTC ..........x..:.::.........x....x......xxx.:....x.:......x.::.:.x.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 20668595 NA +3314 chr4 + 190214555 25602595 25602594 25602667 73 ACATGCAGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGTGCCCGAGAG chr4 + 94230402 76033194 76033193 76033264 76033194 76033193 76033264 71 ATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.::......--.....x......:...........::........x.xx.x...x::....x:...:::.. 11M2D60M 52/71 73.2% 71/94230402 0.0% 2/71 2.8% -50430599 -43799803 +3615 chr4 + 190214555 25604873 25604872 25604955 83 CGTGGTGGCACAAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..x.--....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -50428324 -43802078 +3360 chr4 + 190214555 25612828 25612827 25612910 83 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.--....:.:...........::........x.xx.x...x::.........:.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -50420369 -43810033 +3806 chr4 + 190214555 25615600 25615599 25615672 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.x...x.:..............x:xx:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -50417605 -43812797 +3379 chr4 + 190214555 25624329 25624328 25624394 66 CAAATAAATAAATAAATAAATAATAAAATAAAATAAACTCCAGTAATCTCATTTGTCTTTTTTTTA chr4 + 94230402 65197255 65197254 65197320 65197255 65197254 65197320 66 CAAATAAACGAATAAACAAGTATTAAAGTAAATTTTAATCCAGTAATGTAATTTGATTTTCTTTCA ........::......:..:..x....:....x.xx.x.........x.x.....x:...:...:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -39572926 -54657476 +3132 chr4 + 190214555 25635142 25635141 25635222 81 CAGTAGCGCGTGCCCATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:..::.:--:..:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 13M2D66M 53/79 67.1% 79/94230402 0.0% 2/79 2.5% -50398057 -43832345 +3191 chr4 + 190214555 25644927 25644926 25644973 47 AAAACCAAAACCAAACAAAACAAAAAACAAAACAAAACAAAATTCCA chr4 + 94230402 44952963 44952962 44953009 44952963 44952962 44953009 47 AAAACCAAACCAAAACAAAACAAAAAACCAAAGGAAACAAATTTCCA .........x.x................x...x:.......x..... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% -19308036 -74922366 +3076 chr4 + 190214555 25678681 25678680 25678763 83 ATTGTAATTTTTTTTTTTTTTTTTTTACTGGTTATGGGAAGGGAGAAATAAAATCATCAAACCCAAAAGGAGTGTGTTGTTTT chr4 + 94230402 58164900 58164899 58164982 58164900 58164899 58164982 83 ATTGTGTTTGTTCTTTTTTTTTTTTTTTTCTTTAGAGGAATGGAATTTTAAAGCAATCTAAACCACTGGAAGTGTGTTCCTTT .....:x..x..:.............x:.xx...x:....x...:xxx....::x...x..x...xx:.:........x:... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -32486219 -61744183 +3087 chr4 + 190214555 25683152 25683151 25683225 74 GTGAGCCTATAGTCTCAGCTACTTGGAAGGCTGAGGCAAGAGGATCACTAAAGCCCAGGAGTTGGAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:.x.:....::..........:.........x.xx.x.:.x....x:.:.....:..:.xx:.x:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -50350052 -43880350 +3858 chr4 + 190214555 25693827 25693826 25693900 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATCGCTTGAATCCGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x..x.x...x.:......:..:.:.:x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -50339377 -43891025 +3823 chr4 + 190214555 25694108 25694107 25694181 74 GTGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCCTGAGCCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:...........::........x.xx.x...x.x.:...:.....:..x.xx:.....:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -50339096 -43891306 +3048 chr4 + 190214555 25702660 25702659 25702708 49 AAAAAAAAAAAAAAAAAAGTATAAATAAATAAAACAATACAAAAACAAA chr4 + 94230402 82425017 82425016 82425065 82425017 82425016 82425065 49 AAAAAAAAAAAAAAGCGTGTATATATAAATAAAAGAATTTAAAAACAAA ..............:x:x.....x..........x...x:......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -56722357 -37508045 +3471 chr4 + 190214555 25714467 25714466 25714580 114 ATAAAATTGCTTTCTTTCTTTCTC-----TTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTTTCTTT chr4 + 94230402 63697112 63697111 63697239 63697112 63697111 63697239 128 ACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT .:.:.x..xx..:..:..:..::.-----.....:.:......:.:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..::..:.-........:.:......x... 24M5I41M5I11M5I16M1D21M 80/113 70.8% 128/94230402 0.0% 16/113 14.2% -37982645 -56247757 +3456 chr4 + 190214555 25714476 25714475 25714589 114 CTTTCTTTCTTTCTCTTTC-----TTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTTTCTTTTTTTTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..::..:.-----.....:...:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.::..:::.:..:......::..:..::..... 19M5I95M 70/114 61.4% 119/94230402 0.0% 5/114 4.4% -37982641 -56247761 +3315 chr4 + 190214555 25714478 25714477 25714576 99 TTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTTT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTC------TCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x.:x.....x.:.....xx.:::.........------......x...--:.::x.....x.x..:....x.....::..:..:....:. 43M6D10M2I40M 66/93 71.0% 95/94230402 0.0% 8/93 8.6% -57612456 -36617946 +3894 chr4 + 190214555 25716987 25716986 25717069 83 CATGGTAGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATCACTTGAACCCAGGAGTCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:.....:.--......:...........::........x:xx.x.:.x.............:..::xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -50316210 -43914192 +3610 chr4 + 190214555 25717542 25717541 25717608 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGAAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...x...........:.:..x.xx:..:..x.. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -50315669 -43914733 +3002 chr4 + 190214555 25724728 25724727 25724786 59 CTCCAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAATTAAA chr4 + 94230402 44632762 44632761 44632820 44632762 44632761 44632820 59 CTTCAGTTGGGAAAAAAAAACAAAAAAAACCCAAAAAAAAAAAACGTAAAGCAATCAAA ..:..::.x::.........x........xxx............x.x....x...:... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -18908034 -75322368 +3022 chr4 + 190214555 25724735 25724734 25724789 55 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAATTAAAAGG chr4 + 94230402 17691365 17691364 17691419 17691365 17691364 17691419 55 TCAAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAAAAG ....................:..x.x...x...x.::.::.....x.:.:...:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 8033370 NA +3081 chr4 + 190214555 25739703 25739702 25739740 38 CAAAAAAAAACAAAAAACAAAAAAAAAACCCATGTGTG chr4 + 94230402 12686307 12686306 12686344 12686307 12686306 12686344 38 CAGAAAAAAACAAAAAACAAACAAAAAACCCATGTATG ..:..................x.............:.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 13053396 NA +3121 chr4 + 190214555 25739760 25739759 25739836 77 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACACAAATCTGTATATATACATATAAGCGTACATTCACA chr4 + 94230402 85834538 85834537 85834614 85834538 85834537 85834614 77 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x.....x.................:.xx:.....:x.:...x..x.:x...:..::x...:x:.::.:.:x.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -60094778 -34135624 +3639 chr4 + 190214555 25739765 25739764 25739840 76 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACACAAATCTGTATATATACATATAAGCGTACATTCACACATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.................:.xx:.:x.::..:.x..x....x...:.::.x..x..::....x........ 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -60094776 -34135626 +3306 chr4 + 190214555 25739771 25739770 25739848 78 TGTGTGTGTGTGTGTGTGTGTGTAGAAACACAAATCTGTATATATACATATAAGCGTACATTCACACATGTACATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA--TGTTTATGCACACATACACACATG .....x..................xx..:::.:::x.::....:..x...:.--:..x:..x.......::...:... 52M2D24M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% -60094770 -34135632 +3846 chr4 + 190214555 25740294 25740293 25740393 100 CATGGTGGCCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAAGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT-GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:-:...x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:..------:.x...:..... 9M1D72M6D12M 68/93 73.1% 93/94230402 0.0% 7/93 7.5% -50292903 -43937499 +3228 chr4 + 190214555 25746511 25746510 25746569 59 TATATATATATATATATTTAAATATATATATTCAAATGTATATATTTAAATATATATAT chr4 + 94230402 91331310 91331309 91331368 91331310 91331309 91331368 59 TATATACATATATATGATTACATACATATACACAAAATCATGCATTTGAATATATACAT ......:........:x...x...:.....:x....xx:..::....:........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -65584799 -28645603 +3646 chr4 + 190214555 25753853 25753852 25753926 74 GTGCACCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAATCCGAGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:...........::::........x.xx.x...x........:..:::..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -50279351 -43951051 +3486 chr4 + 190214555 25757132 25757131 25757210 79 GTGGCGCACACCTGTAGTCCCAGCTACTCGGGAGGGTGAGACAGGAGAATTGCTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......:.........:.::...x....x.xx.x...x::..............x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -50276069 -43954333 +3030 chr4 + 190214555 25758660 25758659 25758702 43 TCTTTCTTTTCTTTCTTTTTTTTTTTTTTCTTTTAGTAGAGAT chr4 + 94230402 64231120 64231119 64231162 64231120 64231119 64231162 43 TCTTTCTTTTTTTTCCTTTTTTTTTTTCTCCTTCAGCTGAGAT ..........:....:...........:..:..:..:x..... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -38472460 -55757942 +3342 chr4 + 190214555 25760891 25760890 25760958 68 TTTTATAGATGAGGAAACCGAGGCACAGAGTGGTTAAACAACTTGCCCAAGGTTACACAGCTGGAAAG chr4 + 94230402 82283129 82283128 82283196 82283129 82283128 82283196 68 TTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG ...:...x...:......:.:.:.....:xx.:....:::...x:..:.....:......:.:.x:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -56522238 -37708164 +3191 chr4 + 190214555 25763710 25763709 25763782 73 TGCACTTGTATTTCCAGCTACTTAGGAGGCTGAGGTAGGAGGATCGCTTGAGCCTGGGGGACCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....x............:::........x:xx.x.:.x.:.....:..::.::.x::x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -50269495 -43960907 +3612 chr4 + 190214555 25770599 25770598 25770682 84 ACTTGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::......x:..--....:.:...........::........x.xx.x...x..:..........:..x:xx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -50262597 -43967805 +3332 chr4 + 190214555 25772612 25772611 25772685 74 AGAAAGAAAAAAGAAAAGAAAAAAAGAAGGGAAAGAAAAGAGAGGAA--GGAAAAGAAAAAAAGAAAAGAAAGAGA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x........:.:.......:...:.:.........x:x.::....--.xx.x...:....x.:...:...:.:. 47M2I27M 54/74 73.0% 76/94230402 0.0% 2/74 2.7% -12306166 -81924236 +3560 chr4 + 190214555 25805982 25805981 25806057 76 TTTTTCTTCATTCCGTGAAAAATTAAAATGTTGTG---GGTTTTTTTTGTTTTGTTTTGTTTGTTTTTTTTTTTTTTTG chr4 + 94230402 69227447 69227446 69227521 69227447 69227446 69227521 75 TTTTTCTTCA----ATGAATGAATGATATTTTATGTGTGGGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTTCTATTG ..........----:....x:.x.:.x..x..:..---..x.........................x......:.x... 10M4D21M3I41M 60/72 83.3% 75/94230402 0.0% 7/72 9.7% -43421465 -50808937 +3015 chr4 + 190214555 25811663 25811662 25811708 46 AGTCTTAAAAAACAAACAAACAAAAAACAACAAAAAAAGCAAAACC chr4 + 94230402 62290405 62290404 62290450 62290405 62290404 62290450 46 AATTCTAAAAAACAAACAAAAAAAAAACAACAAAAAAAACCACATC .:.::...............x.................:.x.x.:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -36478742 -57751660 +3098 chr4 + 190214555 25811676 25811675 25811767 92 AAACAAACAAAAAACAACAAAAAAAGCAAAACCCTAGATACTGTTCCTATCTTTGAGGAGTTTTCTTTTCCTGTTTTTTTTTTTTTTTTTTG chr4 + 94230402 22215901 22215900 22215992 22215901 22215900 22215992 92 AAACAAACAAACAACAACAACAACAAAAAAACAGTAAGAACCACTCACATCTACTTGTCCTTCACTCTACTTGTTTCCTTTTTCTTCATTTG ...........x........x..x.:x.....xx..::x..:::..x:....x:xx.xxx..:x..:.x.:.....::.....:..:x.... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 3595775 NA +3426 chr4 + 190214555 25812882 25812881 25812942 61 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:.........::::........x.xx.x...x.:...........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -50220322 -44010080 +3043 chr4 + 190214555 25850799 25850798 25850877 79 CTGTCTGGTTTTTTTGTTTGTTTTTGAATTTTCAGGGTTTTCTTTTTTTTGTTTGTTTGTTTTTTTTTTTGAGTTGGAG chr4 + 94230402 41855232 41855231 41855303 41855232 41855231 41855303 72 CTGTCTG---CTGATATCTGTTTTA----TTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTGGTGGGGAG .......---:.xx.:.:......x----...::...:...:....x..............x.........:xxx.... 7M3D15M4D50M 56/72 77.8% 72/94230402 0.0% 7/72 9.7% -16004433 -78225969 +3153 chr4 + 190214555 25850819 25850818 25850866 48 TTTTTGAATTTTCAGGGTTTTCTTTTTTTTGTTTGTTTGTTTTTTTTT chr4 + 94230402 43478466 43478465 43478513 43478466 43478465 43478513 48 TTTTTGCATTTTCAGGATTTTTTTTTTTTTGGTTGTTGTTGTTTTTTT ......x.........:....:.........x.....xx.x....... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -17627647 -76602755 +3097 chr4 + 190214555 25858516 25858515 25858581 66 CCCACATGTATCTGTTCTGTTTTTTTGTTGTTGTTGTTTTGTTTTTGTTTTTTTTGATTTTTTTGT chr4 + 94230402 6207714 6207713 6207779 6207714 6207713 6207779 66 CCCACATTTCAGTCTTGTGTTGGCTTGTTGTTATTGTTGTTTTTCTGTTTTTTTTTTTTTTTCTGT .......x.xxx.x..x....xx:........:.....x.x...:..........xx.....:... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 19650802 NA +3188 chr4 + 190214555 25858518 25858517 25858579 62 CACATGTATCTGTTCTGTTTTTTTGTTGTTGTTGTTTTGTT---TTTGTTTTTTTTGATTTTTTT chr4 + 94230402 24860774 24860773 24860838 24860774 24860773 24860838 65 CACATGTATCTGTGTTTTTTTTTTGTTGTTGTTGTTTTTTTAAATGTGCTTTTCCATGTTTTGTT .............x:.x.....................x..---.x..:....::xx:....x.. 41M3I21M 50/62 80.6% 65/94230402 0.0% 3/62 4.8% 997744 NA +3157 chr4 + 190214555 25858534 25858533 25858567 34 GTTTTTTTGTTGTTGTTGTTTTGTTTTTGTTTTT chr4 + 94230402 57451176 57451175 57451209 57451176 57451175 57451209 34 GTTTTTTTGTTGTTGTTGTTTTGTTTTTGTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -31592642 -62637760 +3132 chr4 + 190214555 25858552 25858551 25858612 61 TTTTGTTTTTGTTTTTTTTGATTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGA chr4 + 94230402 62953648 62953647 62953708 62953648 62953647 62953708 61 TTTAGTCTTTACTGATTTTGCTTTTTTTGTTTGTTTGTTTGTTTTTTAGTACTGTAACTGA ...x..:...::.xx.....x.......................x..x..x:..x:..x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -37095096 -57135306 +3254 chr4 + 190214555 25871885 25871884 25871961 77 GCGGCACATGCCTGTATCCAGCTACTTGGTAGGCTGAGGCAGGAGAAGCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::..:.:x.:xx............:x........x.xx.x..............::.:..x:xx:..:..:.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -50161316 -44069086 +3082 chr4 + 190214555 25887392 25887391 25887454 63 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTA chr4 + 94230402 23738919 23738918 23738981 23738919 23738918 23738981 63 CATTTCAGACAAAAAAAAAAAACAACACAAAAATAAAAATAGAAAACTGATAGGAAGTAAATA ...:...:.x............x..x.x.....x.....x.:....xx..x..:...x..:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 2148473 NA +3195 chr4 + 190214555 25887396 25887395 25887483 88 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAAAAGAGAAAA chr4 + 94230402 78003602 78003601 78003689 78003602 78003601 78003689 88 TCAGAGCAGCAAAAATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAAGTAAAAAACAGGGAAGGAATGAAACAGGAGAA ...:.:x.:x.....x:xx.....:.....x............:x:.:.xxx.x.......:..x..::.:.:..x....x::..:.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -52116206 -42114196 +3314 chr4 + 190214555 25887399 25887398 25887485 87 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAAAAGAGAAAAGA chr4 + 94230402 58935723 58935722 58935809 58935723 58935722 58935809 87 AATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGA ..x:.:..:....x.:x:.xx..::.....x:..:.::.......:x............:..::.:.::x..x.x..:.::...... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% -33048324 -61182078 +3361 chr4 + 190214555 25887401 25887400 25887475 75 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAAA chr4 + 94230402 66803520 66803519 66803594 66803520 66803519 66803594 75 AGATAAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAAA .:.x...:x.:.:...:.........:..:..:........::.:x..x.:....:..:.::.x....x.x:... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -40916119 -53314283 +3007 chr4 + 190214555 25887417 25887416 25887487 71 AAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAAAAGAGAAAAGAAC chr4 + 94230402 54037031 54037030 54037101 54037031 54037030 54037101 71 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAAC .::.....:.............::.:x...:.xx::x:.:x......x..::.:........x:...x... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -28149614 -66080788 +3284 chr4 + 190214555 25940569 25940568 25940622 54 GCAACAGAGCGAGACTCCATCTCAAAAAGAAAAAAAAAAAAAAAAAGAAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ....x:....:....xx.x..........:.:...............x.x.... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -62442139 -31788263 +3328 chr4 + 190214555 25959683 25959682 25959783 101 CATGGTGGCACAAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGAAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTAAGCCGACATCGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....::..x.--....:.:...........::........x.xx.x:..x::........::.:..x.xx:..:..:..------:....x:..... 14M2D67M6D12M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% -50073514 -44156888 +4090 chr4 + 190214555 25960801 25960800 25960888 88 ATGCATGGTGGCTCACGCACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTGCACG----TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..::....:x....----....:.:...........:.........x.xx.x...x.............:..x:xx:..:..:.. 17M4D67M 63/84 75.0% 84/94230402 0.0% 4/84 4.8% -50072393 -44158009 +3095 chr4 + 190214555 25974287 25974286 25974345 59 AAGGACTTTTTTCTGTGTCTCTGTTTTTTTCTCCTCTTTTTTTCTTCTTTAAGAGACAG chr4 + 94230402 27416012 27416011 27416070 27416012 27416011 27416070 59 AATGACTTTCTTCTCTCTCTCTTTTTTTTTCATATCTATTTTTCCTCTCTAAGTTACAG ..x......:....x.x.....x........x:x...x......:...:....xx.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -1441725 -92788677 +3931 chr4 + 190214555 25978859 25978858 25978942 84 ACGTGGTTGTGCGCAACTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGGGTTAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::..x....:.:--......:.........:..:........x.xx.x...x.............::.:.xx:..:..:.. 15M2D67M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% -50054337 -44176065 +3389 chr4 + 190214555 25997764 25997763 25997831 68 GTGGTGCTCATGCTTGTATTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGC----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......----:.x....x.:...........::........x.xx.x...x.:...........:.. 7M4D57M 51/64 79.7% 64/94230402 0.0% 4/64 6.2% -50035437 -44194965 +3174 chr4 + 190214555 26002422 26002421 26002500 79 GTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGAAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--....:.:...........::........x.:x:x...x::.........:.:..x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -50030779 -44199623 +3008 chr4 + 190214555 26008235 26008234 26008294 60 TTATTAATTTTTTTCTTTTGTTTCTTTCTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 2674191 2674190 2674250 2674191 2674190 2674250 60 TTACCAGATTTGTTCTGTTGTTATTTTGTTCACCCCTTTCCTCTTTTTTTTTTTTTTTTT ...::.:x...x....x.....x:...x..:x:::....::................... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 23334044 NA +3214 chr4 + 190214555 26010338 26010337 26010395 58 TAAAGATGTTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTAATCAGATTGCTTCATTT chr4 + 94230402 10659694 10659693 10659746 10659694 10659693 10659746 53 TGAAGCTGTTCTCTCTCTCTCTCTCTC---TTTTTTTTTTAAC--GATAACTTCATTT .:...x.....................---............:--...x:........ 27M3D13M2D13M 48/53 90.6% 53/94230402 0.0% 5/53 9.4% 15350644 NA +3313 chr4 + 190214555 26011213 26011212 26011261 49 AAATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857608 6857607 6857656 6857608 6857607 6857656 49 AAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .........::..:...::....x..........x...........x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 19153605 NA +3054 chr4 + 190214555 26011228 26011227 26011309 82 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTATGTGTGTATTTATATGTATATATGTATATATATATATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.:...x.................:.xxx...xx.:..:::.:.:.xx...::.:.x....:.:.:...:.:.:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -59823305 -34407097 +3087 chr4 + 190214555 26011230 26011229 26011311 82 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTATGTGTGTATTTATATGTATATATGTATATATATATATACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x.................:.:x:.x.:x:::.:::...x..x..::..:.x.:.::.:.:...:.:... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% -59823303 -34407099 +3585 chr4 + 190214555 26011232 26011231 26011315 84 TATATATGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTATGTGTGTATTTATATGTATATATGTATATATATATATACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACA--TATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x.................x.xxx....x.::.::.--...:.:x...:....x...::.:.:......... 48M2D34M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% -59823301 -34407101 +3789 chr4 + 190214555 26011236 26011235 26011318 83 TATGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTATGTGTGTATTTATATGTATATATGTATATATATATATACACACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x.............x...x.xx....:x.:..x:.......x...::.:.x...::.:.:.:........ 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% -59823297 -34407105 +3545 chr4 + 190214555 26038118 26038117 26038200 83 CATGGTCGTACATGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGAGTCACTTGAGCCTAGAAGGTCGAGGCTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x..:..:.--......:.:.........::........x:xx.x..:x.......:..:.....x.:x:.....::. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -49995079 -44235323 +3237 chr4 + 190214555 26047625 26047624 26047694 70 GTGGTGCACACCTGTAGTCCCAGCTATTTGGGAAGCTGAGGTAGGAGGATTGCTTGAGCCCAGAAGGTCT chr4 + 94230402 76033201 76033200 76033268 76033201 76033200 76033268 68 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTT .........:--......:.......:...::.:......x:xx.x.:.x::.....:........x.:. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -49985576 -44244826 +3093 chr4 + 190214555 26052073 26052072 26052138 66 GAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGGATTGCTGTGATAAGAATTAAAA chr4 + 94230402 10252361 10252360 10252426 10252361 10252360 10252426 66 GATAAAGAATACAAATTAAAAAAAAAAAAGGAAAAAGAAATAGGATCACTGATTTATAAACTAAAA ..x...:..x.x...xx........:...:..........x.....::...xxx..x:..:..... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 15799712 NA +3190 chr4 + 190214555 26070098 26070097 26070146 49 AGTTGACAAACT---TTTTAAAAATGACAATCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 31239014 31239013 31239065 31239014 31239013 31239065 52 AATTAACAAATTGGTTTGTAAAAATGACAATCTTTTCTTCTTTTTTTTTTTT .:..:.....:.---..x..................:..:............ 12M3I37M 43/49 87.8% 52/94230402 0.0% 3/49 6.1% -5168916 -89061486 +3052 chr4 + 190214555 26072458 26072457 26072540 83 CATGGTGGCATGTGTCTGTAATCTCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAACTTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..:::x....:.::..........::........x.x:.x...x.:.......:::.:..x:xx:..:..:.. 8M2D73M 53/81 65.4% 81/94230402 0.0% 2/81 2.5% -49960739 -44269663 +4380 chr4 + 190214555 26095565 26095564 26095753 189 TCCTGGGCAATGTAGTAAGACCCCATTTCATATTAAAGAAA--------GAGAAAGAGAGAGAGGGAGGGGGAGAGAGAGAGAGAGAA----------AAGAAGAAGAGGAAGAAGAAGGAGGAGGAAGGAAGGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGTGAGAAGGAGAGAAGGAAGAGAAATTTAATTGGAATTACGATAC chr4 + 94230402 14751823 14751822 14752024 14751823 14751822 14752024 202 TTCTGGAGAAAGTAAGAAAACCTCTGGCAATATAAAGGAGATCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAG--GGAGACAAAAAAGGGAAAC---ATTGCAATAGCAACAC .:....:x..x...:x..:...:.xxx:x....x..:..:.--------:.....x.:.xx....x..x...:..:....:x:.....----------..:.x:x.:...x........:.......xx:..:::.:.::.::.x.:..:.x.:..:x:..:x.:..--.....x..::...:....:---....x...x:.:.:.. 41M8I39M10I69M2D19M3D16M 117/184 63.6% 202/94230402 0.0% 23/184 12.5% 11343742 NA +3214 chr4 + 190214555 26095633 26095632 26095686 54 AGAGAGAGAGAAAAGAAGAAGAGGAAGAAGAAGGAGGAGGAAGGAAGGAAGGAA chr4 + 94230402 66803529 66803528 66803582 66803529 66803528 66803582 54 AGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAA .....:...:....:.......:...:...:...:.x..x.:.x.....::... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -40707896 -53522506 +3400 chr4 + 190214555 26107763 26107762 26107829 67 TGGTGCACACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAAGAGAATCACTTGAACCTATGAAGC chr4 + 94230402 76033202 76033201 76033265 76033202 76033201 76033265 64 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGC ........:--......:.......:...::........x.xx.x...x..........:.-..... 9M2D50M1D5M 53/64 82.8% 64/94230402 0.0% 3/64 4.7% -49925439 -44304963 +3476 chr4 + 190214555 26109393 26109392 26109492 100 ACTGTGCCTGTCCACCTTCCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA-TATATATATA-TATATA chr4 + 94230402 4618332 4618331 4618425 4618332 4618331 4618425 94 ATTGTGGCTGTT--------TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATA .:....x....:--------.:...:...:x:x.::.x.......::..............x:..x.x:......x.x......-....x.....-...... 12M8D64M1I10M1I6M 70/92 76.1% 94/94230402 0.0% 10/92 10.9% 21491061 NA +3737 chr4 + 190214555 26109412 26109411 26109491 80 CTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:..::x:x.::.x.......::..............x:....::......x.x......-....x...... 69M1I11M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 21491073 NA +3577 chr4 + 190214555 26109413 26109412 26109489 77 TCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA-TATATATATAT chr4 + 94230402 4618342 4618341 4618419 4618342 4618341 4618419 78 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .:.:...:...:x:x.::.x.......::..............x:..x.::......x.x......-....x...... 66M1I11M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% 21491071 NA +3432 chr4 + 190214555 26109414 26109413 26109492 79 CTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATA chr4 + 94230402 4618339 4618338 4618418 4618339 4618338 4618418 80 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ..x.:.:...::..:x:x.::.x.......::..............x:x...::......x.x......-....x..... 69M1I10M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% 21491075 NA +3404 chr4 + 190214555 26109416 26109415 26109494 79 CTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATATACA chr4 + 94230402 4618339 4618338 4618418 4618339 4618338 4618418 80 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ..x.:.:..::...:x:x.::.x.......::..............::x...::......x.x......-....x...:. 69M1I10M 56/79 70.9% 80/94230402 0.0% 1/79 1.3% 21491077 NA +3142 chr4 + 190214555 26109418 26109417 26109509 92 CTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATATATAT chr4 + 94230402 4618339 4618338 4618426 4618339 4618338 4618426 88 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT---TATATAT ..x.:.::..:...:x:x.::.x.......::............x.::x...::......x.x......-:....x.:.:.:---....... 69M1D12M3D7M 61/88 69.3% 88/94230402 0.0% 4/88 4.5% 21491079 NA +3274 chr4 + 190214555 26109435 26109434 26109505 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x.:...:x:.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -34722095 -59508307 +3533 chr4 + 190214555 26109437 26109436 26109529 93 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATATAT-ATATATACACACACACATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x:.x.:...:x.....-:.x.:.:.:..::::::..... 71M1I22M 61/93 65.6% 94/94230402 0.0% 1/93 1.1% -34722093 -59508309 +3627 chr4 + 190214555 26109439 26109438 26109531 93 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATATATAT-ATATACACACACACATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x:x:.x.:....x.....-:.x.:::.:..::::.:..... 71M1I22M 61/93 65.6% 94/94230402 0.0% 1/93 1.1% -34722091 -59508311 +3413 chr4 + 190214555 26109441 26109440 26109533 93 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATATATATAT-ATACACACACACATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x...........x.:.:.......:.:....:.:.:.:::.:..x:x:.x.:.:..x.....-:.x::::.:..::.:.:..... 71M1I22M 60/93 64.5% 94/94230402 0.0% 1/93 1.1% -34722089 -59508313 +3480 chr4 + 190214555 26109443 26109442 26109535 93 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATACACACACACATATATATATATACAC-ACACACATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.........x.x.:.:.......:.:....:.:.:.:::....x:x:.x...:..x.....:xx.-:::.:...:.:.:..... 75M1I18M 62/93 66.7% 94/94230402 0.0% 1/93 1.1% -34722087 -59508315 +3174 chr4 + 190214555 26109605 26109604 26109686 82 ACTGTGCCTGTCCACCTTCCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACA chr4 + 94230402 4618332 4618331 4618405 4618332 4618331 4618405 74 ATTGTGGCTGTT--------TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATA .:....x....:--------.:...:...:x:x.::.:.......::..............x:....::......x.x..:. 12M8D62M 53/74 71.6% 74/94230402 0.0% 8/74 10.8% 21491273 NA +3003 chr4 + 190214555 26155414 26155413 26155449 36 TTTTAGTTTTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 68982956 68982955 68982991 68982956 68982955 68982991 36 TTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT .....x:............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -42827542 -51402860 +3205 chr4 + 190214555 26157067 26157066 26157140 74 ACCCTGTGTCAAAAACAAACAAACAAACAAACAAAAACAAACAAACAAACAAA------AAAACCCCCAAAACTAAAAAC chr4 + 94230402 33269888 33269887 33269967 33269888 33269887 33269967 80 ACACTGTAACAAAAGCAAGCAAACAAACAAACAAAAGAAATCCAACAAGAAAACCTGCCAAAAGCTTAAGAAGTCAAAAC ..x....:x.....:...:.................:x..x.x.....:x...------....x.::x.:..x.x..... 53M6I21M 56/74 75.7% 80/94230402 0.0% 6/74 8.1% -7112821 -87117581 +3605 chr4 + 190214555 26162568 26162567 26162654 87 ATTTAATCTTCACAAGAATCCTAGGAAAGAGGT--GGCATATTATCCCCATTCTACAGATGAACAAATTGAGACATAGAGAGGTTAAAT chr4 + 94230402 28016161 28016160 28016249 28016161 28016160 28016249 89 ATTTAAACCTTCCTGCACCTCTAGGAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ......x.:.:x.x:x.x::......:.x....--.xx.......:......:........:.x....:.x..:.:.......:.x.:. 33M2I54M 62/87 71.3% 89/94230402 0.0% 2/87 2.3% -1853593 -92376809 +3588 chr4 + 190214555 26177443 26177442 26177519 77 GTTGTGCACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGGATCGCTTGAACCCGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......x......:.......:...::........x:xx.x.:.x.:.........:::..x.xx:..:..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -49855758 -44374644 +3221 chr4 + 190214555 26177581 26177580 26177760 180 AAAAGAAGAAAG------AGAGAAAGAGAAAGAGAAGGAAAGAAAAAAAGAAAAGGAGAAAGAAAGGAAGGAAGAAAGAAAGAAAGAGAAAAAATGTGAACCCCAATCCATCACCACTAAGAAAGTCAGCTACCTTGTAATCATTTTATTTTCTGATGATCAGAGTAATATATACTTATCTTAGAA chr4 + 94230402 58935727 58935726 58935881 58935727 58935726 58935881 155 AGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGA-----GGAAATTGTG--------------------CAGGAATTGACTCTCCTTGTTGTCCTCTTTGTTATTG------AAAGAAACATCTATTTACATTAGAA .:.....:.x..------..::...:x...:::........:x..:....x......::......x:.x.x...::.:.....-----::...x....--------------------x..:..x.x.x::x......x:..x.:..xx..x:..------.:..x..:..x..:...:x...... 12M6I65M5D10M20D37M6D25M 100/149 67.1% 155/94230402 0.0% 37/149 24.8% -32758146 -61472256 +3142 chr4 + 190214555 26177588 26177587 26177647 60 GAAAGAGAGAAAGAGAAAGAGAAGGAAAGAAAAAAAGAAAAGGAGAAAGAAAGGAAGGAA chr4 + 94230402 29014678 29014677 29014737 29014678 29014677 29014737 60 GAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ...:...xx.x.:..:.....::.::.:..:.....:....:..........::.x.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -2837090 -91393312 +3610 chr4 + 190214555 26183883 26183882 26183941 59 GCACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......::..........::........x.xx.x...x.:...........:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -49849323 -44381079 +3800 chr4 + 190214555 26187903 26187902 26187987 85 TGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGCTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.:.........::::........x.xx.x...x................x.xx:.....:..------..x..x...... 67M6D12M 61/79 77.2% 79/94230402 0.0% 6/79 7.6% -49845308 -44385094 +3525 chr4 + 190214555 26189522 26189521 26189600 79 GTGGCGCACACCTGAAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTTCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--..x.:.:............:........x.xx.x...x.:...........:..x.xx:..:.x:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -49843679 -44386723 +3471 chr4 + 190214555 26191150 26191149 26191211 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:......x........:.:..:...:.....x....::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 24696156 NA +3068 chr4 + 190214555 26191154 26191153 26191209 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 24696154 NA +3121 chr4 + 190214555 26191156 26191155 26191209 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -63838920 -30391482 +3467 chr4 + 190214555 26191158 26191157 26191210 53 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:...............:.:..:...:.....x.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 24696158 NA +3162 chr4 + 190214555 26191160 26191159 26191211 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:....x..........:.:..:...:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 24696160 NA +3002 chr4 + 190214555 26191178 26191177 26191242 65 AAAATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT chr4 + 94230402 78912919 78912918 78912983 78912919 78912918 78912983 65 AAAATATATAAATACATATGTACAGTTATTCACAGAAGGAAAAAAAGAGTCAGAGGAAAAGAGGT ..........x...:....:..:.xx...x:.:...::..:.:.:....xx....::.:....:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -52721741 -41508661 +3663 chr4 + 190214555 26200532 26200531 26200613 82 ATGGTGGTGCATACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCATGAGGTTATGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::........--.x...:..:...........::........x:xx.x.:.x.......:....x:..x..xx.....:.. 11M2D69M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% -49832666 -44397736 +3022 chr4 + 190214555 26202993 26202992 26203063 71 GGAAGGAAGGAAGGAAAAAAGAAAAGAAAAGAGAAGAAAGAAAAGAAAAGAAAAATAATTTCTCACCTCCA chr4 + 94230402 74345159 74345158 74345229 74345159 74345158 74345229 71 GGGAAGAGAACGGGAGAAAGGGAAAAAAAAAAGAAAAGAGAATTAAAACGAAAGAAAACTTCTCAGATCTA ..:.:..:::x:...:...:.:...:....:....:.:....xx:...x....:.x..:......xx..:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -48142166 -46088236 +3257 chr4 + 190214555 26209756 26209755 26209798 43 TCCCTTCCTCCTTCCCTCTCCCCCCTTCCTTCCTCCTTCCCTC chr4 + 94230402 47060627 47060626 47060669 47060627 47060626 47060669 43 TCCCTTCCTTCTTCCCTCTCCCTCCTCCTCTCCTCTTTTCCTC .........:............:...:.::.....:..:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -20850871 -73379531 +3257 chr4 + 190214555 26209805 26209804 26209847 43 TCCCTTCCTCCTTCCCTCTCCCCCCTTCCTTCCTCCTTCCCTC chr4 + 94230402 47060627 47060626 47060669 47060627 47060626 47060669 43 TCCCTTCCTTCTTCCCTCTCCCTCCTCCTCTCCTCTTTTCCTC .........:............:...:.::.....:..:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -20850822 -73379580 +3849 chr4 + 190214555 26210634 26210633 26210812 179 TCAAACCCTTAAGCCAGCTTTCTTTCTT----------TTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTC chr4 + 94230402 50176228 50176227 50176407 50176228 50176227 50176407 180 TCTAACTGATAAGAAAGGTTTGTTTCTGGCAAGATGGATTTTCTGTCTCACTG-----CTCTCCTTTCTTCCTTTAT--CCGCCCACTTTTGCATTGTTCTTTCTGTTCTT--TGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTC ..x...:xx....xx..x...x.....x----------......x...:x..x-----..:.........:....x.--.:x:..x::...x.x.:x.......:x.::..--.x:x...x..:..x:..............:xxxx.::x.:.:.::x:......x::.:...::.........::.. 28M10I15M5D19M2D32M2D76M 111/170 65.3% 180/94230402 0.0% 19/170 11.2% -23965594 -70264808 +3551 chr4 + 190214555 26210653 26210652 26210785 133 TTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 50176284 50176283 50176414 50176284 50176283 50176414 131 TCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTT-CTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT-TCTTTCTCCTCCATTCTT .:.......::..:x.:.x::.x:.:..x.x..x:.:.:.:.x..::..x:x...x..:..x:...........-....xxx..::x::...::x...:...x.:..:......-.:.:.:..:.:.x..... 74M1D39M1D18M 81/131 61.8% 131/94230402 0.0% 2/131 1.5% -23965631 -70264771 +3408 chr4 + 190214555 26210658 26210657 26210805 148 TCTTTTTTCTTTCTTTCTTTCTTTCTTTCCTT-TCTTTCTTTCTTTCTTTCCTTCTTTCC-TTCTTTCT-TTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTC--TCCTCCATTCTT .:..:.x...:x..x:::.:.......:.:..-..:x:.:x::...x:x.:x.......:-......x.-...x..:..xx........:.....:xxxx.::x.:.:.::x:......x::.:...::........--..:.:.x..... 32M1I27M1I8M1I67M2D12M 92/146 63.0% 149/94230402 0.0% 5/146 3.4% -23965608 -70264794 +3245 chr4 + 190214555 26210706 26210705 26210788 83 TCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::......:...x.::..x....:...:x.:::..xx..x..x.::........:...::...x.....x..xx:.x..... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -31161321 -63069081 +3169 chr4 + 190214555 26210722 26210721 26210804 83 TCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:....:..::..::::..x....:...::.:::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -31161305 -63069097 +4026 chr4 + 190214555 26214271 26214270 26214489 219 AAAGAGAAAGGAGGAAGGAAAG-GAAGGAAGCAAGGAGACAGAGAAGGAG-GGAGGGAGGGAAGAGAAAGAAAGAAAAGGAA-GAGAAAGGAGGAAGGAAGGAAGGAGAGAGAAAGAAGGGGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACAAGGAGGG chr4 + 94230402 1317354 1317353 1317567 1317354 1317353 1317567 214 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAA-AATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAG-------TGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAG .:....x.::....x.x:x...-x.....x.x.:::....xxx:..:x..-:..:x:..:xx....:.....:.........-......:..::x..xx.:-..x....::x::.:.x.:.xx:...................x:x...-------x:.:..:.:.xxx:..xxx......:..::.x.:xx.:x::.:x.:.:..:....:x:......:. 22M1I27M1I31M1I18M1D47M7D66M 128/211 60.7% 214/94230402 0.0% 11/211 5.2% 24896917 NA +4258 chr4 + 190214555 26214335 26214334 26214491 157 AAAGAAAGAAAAGGAAGAGAAAGGAGGAAGGAAGGAAGGAGAG-AGAAAGAAGGG--GAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAA-ACAAGGAGGGAA chr4 + 94230402 49044660 49044659 49044808 49044660 49044659 49044808 149 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATG------------AAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .....:.:..:.:x......xx:.:..x:.xx..:...:x:..-..x:.....x:--:..x...::.........xx.:........::..:.x......x:------------..::...............:x....:.xx....x-.x:.:....... 43M1I11M2I45M12D34M1I12M 100/145 69.0% 149/94230402 0.0% 16/145 11.0% -22830325 -71400077 +4056 chr4 + 190214555 26214343 26214342 26214516 174 AAAAGGAAGAGAAA-GGAGGAAGGAAGGAAGGAGAGAGAAAGAAGGGGAGGGAGGGAG------GGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACAAGGAGGGAAGGAGGGAGGGAGGGAAGGAGGAAGG chr4 + 94230402 65771128 65771127 65771300 65771128 65771127 65771300 173 AAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAG-----GAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGA-AAACA--GATGTTAGGAGGAAGGGAGAGAACAAGCAAGG ......x....:..-:.:.x..:x..:..x:..:.x.xx.:.x....xx:.x.:.:.:------:.....xx...-----....:........x..:.........::x.x.:...xx::.:...x...::.xx...:x..-.....--..x.xx......:......:...x:..x.... 14M1I43M6I11M5D61M1D5M2D32M 112/166 67.5% 173/94230402 0.0% 15/166 9.0% -39556785 -54673617 +6023 chr4 + 190214555 26214365 26214364 26214792 428 GAAGGAAGGAGAGAGAAAGAAGGGGAGGGAGGGAGGG----AAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGA----AAGAGAAACAAGGAGGGAAGGAGGGAGGGAGGGAAGGAGGAAGG------------GAGGGAGGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGAAAAGAG---AGAGAAAAGAGAAAAAGAAAGAAAGGAAGGAAGG---GAGGAAACAGAGAGAGAATGAAAAAGAAAAAAG-------------AGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGG----------GAGGAGAGAGGGAGGAAGGAT--------GGAAGGAAGGAAGGAGAGAGAGAGAAAGAAAGAGGGAAGAGAGA-----------GAGAAAGAGAAAAAGAGAGAAAAAAGAGAAAGAAAGAAAGAAAAAGAGA chr4 + 94230402 24794109 24794108 24794604 24794109 24794108 24794604 496 GAAGAAAGGGGATACAGAAAAGAGGAGAACAAGCAGCTCTCATGGCAGAATAGCACAAGGAATAACAACCTATACGGGTTGGTAAAGGAATAAAAAGGACCAAAATAGAAGATGGGAAGAGAGGCAGAAGCTTGGTGAAGTAGTCAGAAAAGAAGTAAGACCCATTACGAAAGAGTGGAGAAAGAAAAAACAGAGTGAGGAAAAGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGAAAATGATAGTAGAAAAAGGCACTAAACAATTAGGGTTAAAAAGAAACAAGAAAGAATAAGAGGAGCTTGAAGGGTAGGCAGGCCAACATTATTAAGTGGGAAGAAGCAAAAACTAATATGGGTACAGAAGGGAGGCTAGATATACTAAGACTGTGGAAGGGTAAAACATGCTTAGTGGGGAAGAAGTTTAAAAAAAAAAAAAAAAAGGGATGAATGTAAATGGGA ....:....:..x.x.:.:...:....::x::.x:.x----.x.:x...:x::x.x..:...x:.x..xxx:x:x.:.xx:.x:..:...x..:..:..x::...x......----......::..::::xxx::x..:.x..xx..::...:..x...:------------...x.::.:...:.::..x:...x....:.::.:.x:.......---.......:.::..x:..:..:.x.x..::.:.:.---.::.:.....xx:..:.....x.:x::......-------------..::xx.........x........:x..:....:xxx::.::xx...x...----------x.:.x.:..:.:..x..::.:--------.x.x:.....:...xx...x.x.xx....xx.x..:.:.:x.:.-----------.:.:....::xxx.:.:.:......:.:..:.:.x...x.x...x.:.. 37M4I71M4I44M12I44M3I34M3I33M13I51M10I21M8I44M11I49M 251/428 58.6% 496/94230402 0.0% 68/428 15.9% 1420256 NA +4907 chr4 + 190214555 26214413 26214412 26214782 370 AAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACAAGGAGGGAAG---------GAGGGAGGGAGGGAAGGAGGAAGGGAGGGAGGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGAAAAGAGAGAGAAAAGAGAAAAAGAAAGAAAGGAAGGAAGGGAGGAAACAG-----AGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAA-----AAAGGAAGGAAGA--AACAAGGGAGGGAGGAGAGAGGGAGGAA---------GGATGGAAGGAAGGAAGGAGAGAGAGAGAAAGAAAGAGGGAAGA-----------GAGAGAGAAAGAGAAAAAGAGAGAAAAAAGAGAAAGAAAGAAA chr4 + 94230402 24794193 24794192 24794598 24794193 24794192 24794598 406 AAGGAATAAAAAGGACCAAAATAGAAGATGGGAAGAGAGGCAGAAGCTTGGTGAAGTAGTCAGAAAA-----GAAGTAAGACCCATTACGAAAGAGTGGAGAAAGAAAAAACAGAGTGAGGAAAAGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGAAAATGATAGTAGAAAAAGGCACTAAACAATTAGGGTTAAAAAGAAACAAGAAAGAATAAGAGGAGCTTGAAGGGTAGGCAGGCCAACATTATTAAGTGGGAAGAAGCAAAAACTAATATGGGTACAGAAGGGAGGCTAGATATACTAAGACTGTGGAAGGGTAAAACATGCTTAGTGGGGAAGAAGTTTAAAAAAAAAAAAAAAAAGGGATGAATGTAA ..:...x:...::..xx..:.x...::.x.:...:::.::x::...xx..:x::..x..xx...:..-----..:.x...---------..::...x.::.:...:.::..x:...x....:..:.:.x..:::::.xxx:...::.......x...::.:.x.x....::...x.x.:.:.:.x:.xx..:.::x:.:..-----.:..:x.x.:..x..xx.:::xx.:.......x.::...:.:x.....:.-----..:..x...x..:--....xx:xx::.x..::...:.x.::..---------.x.::.....:...xx:..x.x.xx:...xx.x:::....x.:.-----------.:.::....:xxx.....:.:.:......::.:.x...x.x.. 67M5D8M9I112M5I50M5I13M2I28M9I44M11I43M 207/365 56.7% 406/94230402 0.0% 46/365 12.6% 1420220 NA +4790 chr4 + 190214555 26214529 26214528 26214732 204 GAGGAAGGGAGGGAGGGAGGGAGGGAAAAGAGAGAGAAAAGAGAAAAAGAAAGAAAGGAA------GGAAGGGAGGAAACAGAGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGAGGGAGGAAGGATGGAAGGAAGGAAGGAGAGAGAGAGAAAGAAAGA chr4 + 94230402 65771126 65771125 65771335 65771126 65771125 65771335 210 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAA ..::....x..:.:::x....x:::x.....x...:.x.xx..:x.::.xx..x...:..------:....:xx.:::.x.:.:.......:...:...:.....x:x..:..xx...::......::.xx.:.:x...::x...x::x...::.:::.......:x:..x.....xx:x..:...x..x:.x.:..xx..x..:...:. 60M6I144M 119/204 58.3% 210/94230402 0.0% 6/204 2.9% -39556597 -54673805 +4346 chr4 + 190214555 26214545 26214544 26214691 147 GAGGGAGGGAAAAGAGAGAGAAAAGAGAAAAAGAAAGAAAGGAAGG------------------------------AAGGGAGGAAACAGAGA---GAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGAGGGA chr4 + 94230402 75176340 75176339 75176519 75176340 75176339 75176519 180 GAAAAACAAAGAAGGAAGGGCAAATAGAAGAAGCAAGAAAACAATGCATTATTTCAGATATTACAACTACTCCTTAGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ..:::.x::.:...::..:.x...x....:...x......:x..x.------------------------------:.:x:..x..x...x..---...x.....:x...:....:.:..:..::...x.....xx....:...:.....x.......:x.:x......x:..::...:. 46M30I17M3I84M 99/147 67.3% 180/94230402 0.0% 33/147 22.4% -48961795 -45268607 +3181 chr4 + 190214555 26214553 26214552 26214657 105 GAAAAGAGAGAGAAAAGAGAAAAAGAA--AGAAAGGAAGGAAGGGAGGAAACAGAGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAG---AGAAAAA chr4 + 94230402 34022636 34022635 34022745 34022636 34022635 34022745 110 GGAAAGAAGCAGATAAAAAAACTAGAACTAGAAAAACAGGTCTGGAAGTACTTCAAAGAGACTGACAAAGTAAAAAGGGAAAAAGATTCTAAAAAGAAAGCTAAGAAAAA .:.....::x...x..:.:..xx....--.....::x...xxx...:.x.x:xx.:.....x...x....x......:....:.:.xxxx..........---....... 27M2I71M3I7M 73/105 69.5% 110/94230402 0.0% 5/105 4.8% -7808083 -86422319 +3493 chr4 + 190214555 26214572 26214571 26214673 102 AAAAAGAAAGAAAGGAAGGAAGGGAGGAAA------------CAGAGAGAGAATGAAAAAGAA-AAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAG chr4 + 94230402 57629675 57629674 57629789 57629675 57629674 57629789 115 AAGAATAGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGAG ..:..x.:x.:.x..:x...x:.:......------------.......x:...x..x.xxx.-....:.....x:.....:..:.......:....:..::.....:...x:.. 30M12I21M1I51M 72/102 70.6% 115/94230402 0.0% 13/102 12.7% -31415103 -62815299 +3014 chr4 + 190214555 26214606 26214605 26214683 78 GAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGA chr4 + 94230402 61014656 61014655 61014733 61014656 61014655 61014733 78 GGGAAACTGTGAGGAAAAAAGAGGAAAGAAAAAGAAAAAGGAAAAAGGCTTCAGAAAAAAAAAGCAACTGATGAAGAA .:..:.x..x:.:::.....:::................:....:..:xxxx:...::..:..:...xx..x.:..:. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% -34800050 -59430352 +3712 chr4 + 190214555 26214610 26214609 26214709 100 GAATGAAAAAGAAA--AAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGAGGGAGGAAGGATGGAAGGAAGG chr4 + 94230402 73744689 73744688 73744789 73744689 73744688 73744789 101 GAATAAATATGAAATTAAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAG-AGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ....:..x.x....--....x:x...xx....:..........:....::....:.-.....x::..:.::.:..:.:.:x..:.x.:..:.....:.x.:. 14M2I40M1D45M 68/99 68.7% 101/94230402 0.0% 3/99 3.0% -47530079 -46700323 +3046 chr4 + 190214555 26214617 26214616 26214699 83 AAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGAGGGAGGAAGGAT chr4 + 94230402 48220516 48220515 48220598 48220516 48220515 48220598 83 AAACATGAAGTAGAAAGAAGTAGAAAACGAAAATAGGAAAGGGAAACAAAAAGCGGAAGTAGGAGGAAATAAGCAGAAATAAT ...x.x:..:x........:x......x::...x..:...:....:x..:..:.::::.x:......:.x.:.x..:..x:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -22005899 -72224503 +3006 chr4 + 190214555 26214624 26214623 26214687 64 AAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGA chr4 + 94230402 33789308 33789307 33789371 33789308 33789307 33789371 64 AATGAAAAAAAAGAAGAAAAAAGAAATAATACTAGGGCAGAAGAAACAGAGGAAAGAATAAAGA ..x..:...:..:.............x.:x.xx...:x:.........::...::..:x.:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -7574684 -86655718 +3205 chr4 + 190214555 26214624 26214623 26214699 76 AAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAACAAGGGAGGGAGGAGAGAGGGAGGAAGGAT chr4 + 94230402 92119546 92119545 92119621 92119546 92119545 92119621 76 AAAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAAGCCATGGACGGGCCAGGGAGGGAAAAT ....x....:.....:..........x.:.:.....x.xx:..:.:x...xx.x...x.:.xx.......:.::.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -65904922 -28325480 +4658 chr4 + 190214555 26214625 26214624 26214774 150 AAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAG-GAAGAAACAAGGGAGGGAGGAGAGAGGGAGGAAGGATGGAAGGAAGGAAGGAG--AGAG------AGAGAAAGAAAGAGGGAAGAGA--GAGAGAAAGAGAAAAAGAGAGAAAAAAGAGAAA chr4 + 94230402 84536568 84536567 84536725 84536568 84536567 84536725 158 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGA---AAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAA ...:.....::..........:x..x.:...x......-.......x......---.:.:......:..:.:xx...x.:x:..:xx..x..--::..------.........x.:.x:....:..--.:...:......xx....::.x.....xx:... 38M1I14M3D36M2I4M6I22M2I33M 106/147 72.1% 158/94230402 0.0% 14/147 9.5% -58321943 -35908459 +3231 chr4 + 190214555 26214745 26214744 26214829 85 AGAAAG---AGAAAAAGAGAGAAAAAAGAGAAAGAAAGAAAGAAA-AAGAGAAGGAAGGAAGGGAAAAGAGAGAGAGAGAAAAGAGAAA chr4 + 94230402 89501667 89501666 89501754 89501667 89501666 89501754 88 AGAAAGCTTATAAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGA-ATAAAGTGAAAAAACAAA ......---.x....x..:.:x......:......:.:.:.....-......:..x....:....xx:..-.x.:..x.....:.x... 6M3I36M1I24M1D18M 64/84 76.2% 88/94230402 0.0% 5/84 6.0% -63286922 -30943480 +3422 chr4 + 190214555 26214784 26214783 26214849 66 AAAAAGAGAAGGAAGGAAGGGAAAAGAGAGAGAGAGAAAAGAGAAAGAAAGGAAGGAAGGGAGGGA chr4 + 94230402 47286855 47286854 47286920 47286855 47286854 47286920 66 AAGGGGAGAAGGAGAGAAGGGAAATCAGACAGAGGGAAAAGGAAATTGGGAGAGGGAAGGGAAGGA ..:::........::.........xx...x....:......::..xx::::..:........:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -21072071 -73158331 +4159 chr4 + 190214555 26214816 26214815 26215051 236 AGAGAAAAGAGAAAGAAAGGAAGGAAGGGAGGGAGGGAGAGAGGAAAGAGAAAATGAAAAAGAAAAAGAG-AGAGAAAAAAGAGAAAAAGAAAGAAAAAAGAGAAAAAAGGAAGGA-AGGAGGGAGGGAGGAAGGACGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAA---GGAGGGAGGGAGGGAGGGAA-------GGAAGGAAGGAGAGAAAGAAAGAAAG--------AAAAGAAAGAGGGAGGGAGGGAA chr4 + 94230402 1317349 1317348 1317598 1317349 1317348 1317598 250 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAG--ACTTTAAAAT--AGCAGAATAAGATCAGAGGAAGAAG-GAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAA-GAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAA ....x.:....x.:::.:.x.x:x...xx.:...x.....:..--.xxxx.....--.:x....x....x-....:..:...-.....:......:......:.x.:xx::..x..-.:.x..:.:x...xx....x...:....-...:...x:x::.x......:..---...xxx..::...:....x.-------.:.x....:::....:xx..:..:..--------.:x.:..x:.x..:.:..:.:.. 43M2D10M2D13M1I11M1D33M1I28M1D23M3I20M7I26M8I23M 150/230 65.2% 250/94230402 0.0% 26/230 11.3% 24897467 NA +3276 chr4 + 190214555 26214861 26214860 26214937 77 AAGAGAAAATGAAAAAGAAAAAGAGAGAGAAAAAAGAGAAAAAGAAAGAAAAAAGAGAAAAAAGGAAGGAAGGAGGG chr4 + 94230402 78784184 78784183 78784260 78784184 78784183 78784260 77 AAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAG ..:..::.x...:::.:.:x...:x.:...:....:.x....x............:x..x.xx...:.....:..:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -52569323 -41661079 +3381 chr4 + 190214555 26215021 26215020 26215084 64 AAAGAAAGAAAAGAAAG--AGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAA chr4 + 94230402 39594990 39594989 39595055 39594990 39594989 39595055 66 AAAAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA ...:::..........x--.:..:.:.....:..:.:.x......:...:.........:.:..:. 17M2I47M 48/64 75.0% 66/94230402 0.0% 2/64 3.1% -13379969 -80850433 +3004 chr4 + 190214555 26215044 26215043 26215103 60 GGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAAAGACAGAAAGAGAAAGAA chr4 + 94230402 71715066 71715065 71715125 71715066 71715065 71715125 60 GGCAGGAAGAGAGAGAGAAGGAAAGTTTAAAACAAACAAAAGCAACAAAAGAAAAAAGAA ..x:...............:.....xxx....x.:.x....:x:...:..::.:...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -45500022 -48730380 +3126 chr4 + 190214555 26215065 26215064 26215167 103 AAAGAGAAAAAGAGAGAAAAAAGACAGAAAGAGAAAGAAAGAAAAAG--AAAGAAAGGAAAGAGAAACAAGGAAGGAAGGATGGAGGGAGGGAGAGAAGGAGGAT chr4 + 94230402 10269792 10269791 10269894 10269792 10269791 10269894 103 AAACAGAAAAACAGTGAAAGAAG--AAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGGT ...x.......x..x....:...--.::.::.x.......x....:.--..::....x.x::....xx......:..:x:x...:::...:..:x:..x..:.:. 23M2D22M2I56M 67/101 66.3% 103/94230402 0.0% 4/101 4.0% 15945273 NA +3919 chr4 + 190214555 26215121 26215120 26215286 166 AAAGAGAAACAAGGAAGGAAGGATGGAGGGAGGGAGAGAAGGAGGATAGGGAAGGAGGA--AGGAAGGAAGGAAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAA chr4 + 94230402 49044653 49044652 49044820 49044653 49044652 49044820 168 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .....xx..x:..:..:...x:.x:..xx::...x.:xx..:.:..:.:.x.:x...:.--.xx...x:..:....:..:..xx.:........::.:::x:.:.:.x:.....:.::..::..x:...:.::...xx:..:xx:...:.::......x...x:.x.. 59M2I107M 95/166 57.2% 168/94230402 0.0% 2/166 1.2% -22829532 -71400870 +4358 chr4 + 190214555 26215151 26215150 26215369 219 AGGGAGAGAAGGAGGATAGGGAAGGAGGAAGGAAGGAAGGAAGGAAAAAGAGA---GAGAAAGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAAAGAGAAAA-------AGAGAGAGAAAAGAGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAG--------AAAAAAAGAAGGAAGGAAGGAA chr4 + 94230402 1317361 1317360 1317597 1317361 1317360 1317597 237 AGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAA ..:...:x.x:x.:.x..:...x....:...:xxxx..::x..x.:..x:...---...:.....:..:..::.:..........:.x.:xx...:x:..x.:x::.:.x::.xx:.........:..:......x:x...x::..::...-------xx...:..:..:.:x.:xx.xx.:..x::...::.....xx..:..:..--------.:x....x..x.::.::.:... 53M3I95M7I49M8I22M 129/219 58.9% 237/94230402 0.0% 18/219 8.2% 24897790 NA +3006 chr4 + 190214555 26215183 26215182 26215234 52 AAGGAAGGAAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAGAGA chr4 + 94230402 44890393 44890392 44890444 44890393 44890392 44890444 52 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAA ......::..::.............:....:......x.x.xx:......:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -18675210 -75555192 +4124 chr4 + 190214555 26215198 26215197 26215362 165 AAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAA--AGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAA-AGAGAAAAAGAGAGAGAAAAGAGAAAGAAAGAA--AGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAG chr4 + 94230402 49044652 49044651 49044821 49044652 49044651 49044821 170 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG ..:...xx:..:::..:....x......xx.::.:x:.xx.......x.:xx..x:....--.xx...x...::...:..:..xx.:........-.:..:x:..:.:x..:.:..:........x...--......xx::::xx..:....::.....x:..x.:x... 60M2I33M1I33M2I39M 104/165 63.0% 170/94230402 0.0% 5/165 3.0% -22829454 -71400948 +3325 chr4 + 190214555 26215204 26215203 26215338 135 GAGAAAGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAGAAAAGAGAAAGA-----AAGAAAGAAAAAGAGAGAGA chr4 + 94230402 14577296 14577295 14577431 14577296 14577295 14577431 136 GAGATAAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGA--GTAGGCAGG--AGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGACAGCTAAGGAAGGGTAAGGGTGTGA ....x.:..:..::.x:....:..x..:....:....:.....xx::...xx:..:..--.x...x...--.:...::.:.x:......:x:.:.x...xx...:xx..::....-----...:...::x...:.x.x.. 58M2D9M2D44M5I20M 84/131 64.1% 136/94230402 0.0% 9/131 6.9% 11637908 NA +4047 chr4 + 190214555 26215204 26215203 26215381 178 GAGAAAGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAGAAAAGAGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGAAGGAAGGAAGAAGGGAG chr4 + 94230402 65771126 65771125 65771302 65771126 65771125 65771302 177 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAG-GAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAG ..:....:x....:..x..:.x:..x.:...x.:.:.x.xx.:...:.:xx::x.:...:x:xxxx..:.:.xx...-..:...:.:...:x..........:..:x:x:...:xx...:::..:....:xx....x:.:..x::.x:xx..:.......:..::.:x...x.:.... 77M1D100M 102/177 57.6% 177/94230402 0.0% 1/177 0.6% -39555922 -54674480 +3055 chr4 + 190214555 26215244 26215243 26215308 65 AAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAGAA chr4 + 94230402 39594991 39594990 39595055 39594991 39594990 39595055 65 AAAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA ....x.::.......xxx.:..:.:....::.::.:.x......:...:.........:.:.::. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -13379747 -80850655 +3265 chr4 + 190214555 26215268 26215267 26215418 151 GGAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAGAAAAGAG-----------------------------AAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAGAGAGGAAGGAAGGGGGGGGAAGGAAGGAA chr4 + 94230402 75176340 75176339 75176519 75176340 75176339 75176519 180 GAAAAACAAAGAAGGAAGGGCAAATAGAAGAAGCAAGAAAACAATGCATTATTTCAGATATTACAACTACTCCTTAGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA .:.::.x.....::..::::x...x....:...x:...:..x.:x.-----------------------------.:.:x...x..xx.:x::.x....x:x:.::x...:.....:..:.:......x..::.xx...::.::....:.x::..:..xx..x.:...:x.......... 46M29I105M 90/151 59.6% 180/94230402 0.0% 29/151 19.2% -48961072 -45269330 +3395 chr4 + 190214555 26215310 26215309 26215414 105 AGAGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAGAGAGGAAGGAAGGGGGGGGAAGGAA chr4 + 94230402 75176415 75176414 75176519 75176415 75176414 75176519 105 AGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ...:x...x..xx.:x:..x....x:x..::x...:.:........:......x..::.xx:.::..::....:.x.:...:.xx..x..:..:x::........ 105M 65/105 61.9% 105/94230402 0.0% 0/105 0.0% -48961105 -45269297 +3599 chr4 + 190214555 26215312 26215311 26215450 139 AGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAG-AGAGGAAGGAAGGGGGGGGA--------------AGGAAGGAAGGGAGGGAGGGAAGGGGACG--------ACTACATCAAAG chr4 + 94230402 51148379 51148378 51148538 51148379 51148378 51148538 160 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGGCGTCATCCAAACCACAGCAGAG ........:--...xx.x...........:.........x.:.::xxx.:::xx.:..x.:.:x.x......x.:...-.:.::......::..:....--------------.x............x.x.xx::..:.:..--------..:...x..:.. 9M2D67M1I20M14I29M8I12M 94/137 68.6% 160/94230402 0.0% 25/137 18.2% -24933067 -69297335 +3186 chr4 + 190214555 26223024 26223023 26223097 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGTGTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.::x.......:.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -49810180 -44420222 +3025 chr4 + 190214555 26239714 26239713 26239766 53 AGGAGAAGAGAAGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGA chr4 + 94230402 24028142 24028141 24028194 24028142 24028141 24028194 53 AGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGA ..:.:.:..:..xx...:.....:..:.:.......:.....:....:::... 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 2211572 NA +3108 chr4 + 190214555 26241066 26241065 26241139 74 GTGCACCTGTGGTCCCAGCTACCAGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAATCCGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:........:x.::........x:xx.x.:.x.......:..::.:.::::x:..:..:.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -49792138 -44438264 +3016 chr4 + 190214555 26244123 26244122 26244193 71 TTTAAAATGTATATATATATGTGTACACATATATGTATATATATATGTATACACATATATGTATACATATA chr4 + 94230402 46063293 46063292 46063363 46063293 46063292 46063363 71 TTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA ....xx..::..:.:..:.......::x::.:....x:..:...:.x....:.........xxx.:..... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -19819170 -74411232 +3307 chr4 + 190214555 26244222 26244221 26244307 86 TACACATATATGTGTCTATATATGTGTACACATACACATATGTGTACACATATATGTGTGTATATGTATACACATATGTGTACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---------TGTGTGTGAATACATACACATAT----ACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ..:......---------.:.:....x.:............----....xx....:.x...::.......:...x:.:........ 9M9D23M4D41M 58/73 79.5% 73/94230402 0.0% 13/73 17.8% -30623069 -63607333 +3828 chr4 + 190214555 26244238 26244237 26244397 160 TATATATGTGTACACATACACATATGTGTACACATATATGTGTGTATATGTATACACATATGTGTACACATATGTGTGTATATGTATACACATATGTGTACACATATGTGTGTATATATATGTATGCACATATGTGT---ACACGTGTGTGTATATATGTATG chr4 + 94230402 79265520 79265519 79265674 79265520 79265519 79265674 155 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC-------TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATG .:.:.:.....:..::.:::::xx...:..:.....:.:.....:.:.:.:.x...:..x.....x....-.:::x.x.....:x..:...-------.x::.x.x.x..x..:..:.x...:..x:x::..x...:---:...x...:.x....:..x.... 70M1D20M7D39M3I23M 95/152 62.5% 155/94230402 0.0% 11/152 7.2% -53021282 -41209120 +4116 chr4 + 190214555 26244254 26244253 26244389 136 TACACATATGTGTACACATATATGTGTGTATATGTATACACATATGTGTACACATATGTGTGTATATGTATACACATATGTGTACACATATGTGTGTATATATATGTATGCACATATGTGTACA-----CGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATAT------ACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:....:.....x:x::.:x::..:.x........:x.......------..x::...::x....:....::..x:...:x.x::::...:.......:x.....:.......::x.xx....-----:...x.....:. 45M6D73M5I12M 85/130 65.4% 135/94230402 0.0% 11/130 8.5% 5135060 NA +3448 chr4 + 190214555 26244266 26244265 26244339 74 TACACATATATGTGTGTATATGTATACACATATGTGTACACATATGTGTGTATATGTATACACATATGTGTACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ..:......-.......:x..::..........::::xx.:....x....:..:.:......x:.....::... 9M1D64M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% -30623025 -63607377 +3116 chr4 + 190214555 26244271 26244270 26244341 71 ATATATGTGTGTATATGTATACACATATGTGTACAC--ATATGTGTGTATATGTATACACATATGTGTACACA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ...:..:.-...:.:..x.....:.:.::.:.....--....:.x...::.......:...x:.:........ 8M1D27M2I35M 52/70 74.3% 72/94230402 0.0% 3/70 4.3% -30623021 -63607381 +3974 chr4 + 190214555 26244295 26244294 26244401 107 ATATGTGTACACATATGTGTGTATATGTATACACATATGTGTACACATATGT----GTGTATATATATGTATGCACATATG----TGTACACGTGTGTGTATATATGTATGCACA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x..:....:.....x.x.:..x::::.:x...:.....x..:..:.----.....:x....:.....:..x:...----...::.::.....:.:x.....:....... 52M4I25M4I30M 74/107 69.2% 115/94230402 0.0% 8/107 7.5% 5135108 NA +3918 chr4 + 190214555 26244331 26244330 26244428 98 ATGTGTACACATATGTGTGTATATATATGTATGCACATATGTGTACACGTGTGTGTATATATGTATGC------ACATATGTGTGTATACATATGTGTGTATAT chr4 + 94230402 5214218 5214217 5214321 5214218 5214217 5214321 104 ATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.:..:...x:......::::.x:...x......:.::.x...::..:..::.x.::....:..:------..:.:......:..:..x.......:.:.. 68M6I30M 65/98 66.3% 104/94230402 0.0% 6/98 6.1% 21030113 NA +3376 chr4 + 190214555 26244337 26244336 26244407 71 ACACATAT--GTGTGTATATATATGTATGCACATATGTGTACACGTGTGTGTATATATGTATGCACATATGTG chr4 + 94230402 22600200 22600199 22600272 22600200 22600199 22600272 73 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ........--:::..:.x.:.:...:..:..x.x..:....:.:x.......:......:......:..x... 8M2I63M 52/71 73.2% 73/94230402 0.0% 2/71 2.8% 3644137 NA +3094 chr4 + 190214555 26244393 26244392 26244439 47 GTATGCACATATGTGTGTATACATATGTGTGTATATATGTATACATA chr4 + 94230402 63364617 63364616 63364663 63364617 63364616 63364663 47 GTATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTATACATA .....::...:...:...:.x..:...........:x.......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -37120224 -57110178 +3082 chr4 + 190214555 26250303 26250302 26250369 67 TTGTAGCATAGATCAGACTCCATTCCTTTTTTTTTTTTTTTTTTTTTGAAATGGAGTCTCACTCTGT chr4 + 94230402 65966173 65966172 65966239 65966173 65966172 65966239 67 TTGTAACTCAAAACAATTTTCATCTCTTTTTTTTTTTTTTTTTTCCTGCAGTGAAATCAAATTCTAT .....:.x:.:.x..:x:.:...::...................::..x.:..:.:..xx.:...:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -39715870 -54514532 +3806 chr4 + 190214555 26270342 26270341 26270466 125 AGGGAGAGAGCAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAAGAAAAG chr4 + 94230402 24042726 24042725 24042851 24042726 24042725 24042851 126 AAGGAAACATTAGGCAACAGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAAG .:...:.x.x:.:.x:.x..x.:..:x......:x:....x.:-:.......:..:.x.::...x..:....:.:...x.:.x.....xx.x:x..:x.x.x.....x...x....:....x.... 43M1I82M 81/125 64.8% 126/94230402 0.0% 1/125 0.8% 2227616 NA +3098 chr4 + 190214555 26270346 26270345 26270430 85 AGAGAGCAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112168 41112167 41112252 41112168 41112167 41112252 85 AGTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..x....x:x..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% -14841822 -79388580 +3106 chr4 + 190214555 26270364 26270363 26270445 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:..x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -14841814 -79388588 +3106 chr4 + 190214555 26270368 26270367 26270449 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:...:.:..x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -14841810 -79388592 +3143 chr4 + 190214555 26270370 26270369 26270474 105 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAG----AAAG---AAAGAA------------GAAAGAAAGAAAGAAAGAAAAGAAAAGGAAAGAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....-------....x.x.:x..::...::x....:----....---...:..------------..:.:....x....:.x:..:.....::...:... 35M7I25M4I4M3I6M12I35M 77/105 73.3% 131/94230402 0.0% 26/105 24.8% -27741223 -66489179 +3237 chr4 + 190214555 26270372 26270371 26270453 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x....:.:..x.:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -14841806 -79388596 +3192 chr4 + 190214555 26282114 26282113 26282155 42 ATTCGTAATCCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 6554015 6554014 6554056 6554015 6554014 6554056 42 ATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ...:..x..:..............:.:............... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 19728099 NA +3594 chr4 + 190214555 26287561 26287560 26287673 113 AAGGAAAGGAAAGGAAAGGACAGGAGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG------GGAGGGGAGGAGCAGAGAAGAGAAGAAAAGAGAAGAAAAGAAAA chr4 + 94230402 59596416 59596415 59596531 59596416 59596415 59596531 116 AGGGAAAG---AGGGAAACTCAGATGAAGAATAGGAATGGGGGGCGGGGGGAGAAGGAGGGAGGGTGGTCTGTTTAAAGAGCAGAAGCAGAGAAGAGGAGAAAATATCTGTAAATAAGA .:......---...:..:xx...:x..:..:x:..:.x...:..x.:......::.::.......x:.x------::..:.x..:............:......x.xxx.x...x..:. 8M3D58M6I44M 74/110 67.3% 116/94230402 0.0% 9/110 8.2% -33308855 -60921547 +4027 chr4 + 190214555 26287586 26287585 26287719 134 GAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAG-----GGGAGGGGAGGGGAGGGGAGGAGCAGAGAAGAGAAGAA--------AAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAAGGAGGGAAGAAAAGAAAGAGAAAGAAAG chr4 + 94230402 32265483 32265482 32265628 32265483 32265482 32265628 146 GATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAG-TGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAG ..x:..:.....x.x::..:.x:x....:....-----.x....:.-x.x......:.....xx:.:::..:....--------x..x.:.:::.........:....:....::.::...:::....:...:x..x...:.:.x.. 33M5I8M1D29M8I63M 87/133 65.4% 146/94230402 0.0% 14/133 10.5% -5977897 -88252505 +3097 chr4 + 190214555 26287608 26287607 26287703 96 GGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGCAGAGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAAGGAGGGAAGAAA chr4 + 94230402 80644409 80644408 80644504 80644409 80644408 80644504 96 GGGGAGGGTAAGAGCAGGGGAGAGATTACAGGAGAACAAAGGAGGAGGAATGAGATGAAAGGAACCTGAAGATGATGATGAAAAAAAGGAGCAAAA ........x.:.:.x:...::.:..xx:x.....x.x.:.:...:..:..x....x....:...xxx:...:x:.x..x.:...::...::x:... 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% -54356801 -39873601 +3170 chr4 + 190214555 26287618 26287617 26287713 96 GGGGAGGGGAGGGGAGGGGAGGAGCAGAGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAAGGAGGGAAGAAAAGAAAGAGAA chr4 + 94230402 80644409 80644408 80644504 80644409 80644408 80644504 96 GGGGAGGGTAAGAGCAGGGGAGAGATTACAGGAGAACAAAGGAGGAGGAATGAGATGAAAGGAACCTGAAGATGATGATGAAAAAAAGGAGCAAAA ........x.:.:.x:...::...xxx.x.:.....x...:...:..:..x..:.x........xxx:.:..x::x::x...:.....:.:x.:.. 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% -54356791 -39873611 +3506 chr4 + 190214555 26287628 26287627 26287716 89 GGGGAGGGGAGGAGCAGAGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAA---GGAGG----GAAGAAAAGAAAGAGAAAGA chr4 + 94230402 80644409 80644408 80644504 80644409 80644408 80644504 96 GGGGAGGGTAAGAGCAGGGGAGAGATTACAGGAGAACAAAGGAGGAGGAATGAGATGAAAGGAACCTGAAGATGATGATGAAAAAAAGGAGCAAAA ........x.:......:.:.....xx.x.:.....x...:..::..:..x..:.x...:.:..---.:..:----..x.....:..:...x..:. 64M3I5M4I20M 64/89 71.9% 96/94230402 0.0% 7/89 7.9% -54356781 -39873621 +3092 chr4 + 190214555 26287630 26287629 26287714 85 GGAGGGGAGGAGCAGAGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAA-----GGAAGGAAAGGAGGGAAGAAAAGAAAGAGAAA chr4 + 94230402 43128059 43128058 43128148 43128059 43128058 43128148 90 GGAGGAAAGGAGAAGAGGAAATAAGAATCAATAAAGAGAGCAGGAAAAAGAAATAACTAGAATGGGTAGATGGAAGAGAAGATAAAGAAA .....::.....x....:.:.x.....xx:.x..::.:..x.:::...:....-----:...x.::x:..x......:....x.:..... 53M5I32M 57/85 67.1% 90/94230402 0.0% 5/85 5.9% -16840429 -77389973 +3148 chr4 + 190214555 26294057 26294056 26294121 65 CAGGAAGTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTGAGATG chr4 + 94230402 50433355 50433354 50433419 50433355 50433354 50433419 65 CAGCCAGTTCTTTTTATTGTTGTTGCTGGTTTTTGTTTTGTTTTGTTTGTTGTTTTTTTAAGCTG ...xx....x.....:..x.....x:..x....xx.........xx..x..........:..x.. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -24139298 -70091104 +3710 chr4 + 190214555 26297157 26297156 26297238 82 GTGGTGGCAGACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAACCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::........x:xx.x.:.x..........::.:..x.:x:.....:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -49736044 -44494358 +3122 chr4 + 190214555 26303147 26303146 26303231 85 CTCCAGCCTGGGTGACAGACTGCAACCCTGTCAAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAATGAATAAA chr4 + 94230402 43678025 43678024 43678109 43678025 43678024 43678109 85 CTACAACCAAGGCAAGAAACTGTAGCTCAGTTAAAAATTAATAAAAGAAATAAAGAGAAAAATGCACAGATGGCAAAGGAGTGAA ..x..:..x:..::.x.:....:.:.:.x..:.....x...xx...x.......x.:.x....:x.:.:..:::...x..:.:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -17374878 -76855524 +3162 chr4 + 190214555 26315144 26315143 26315211 68 CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATGTATATACTGGGGA chr4 + 94230402 1495003 1495002 1495070 1495003 1495002 1495070 68 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTTTGGA ..:.........x.:......x.x......:.:..:...:.....x.....:.x.x:xx....xx... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 24820141 NA +3505 chr4 + 190214555 26315145 26315144 26315200 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATGTA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x:....:. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 24820145 NA +3038 chr4 + 190214555 26315147 26315146 26315202 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATGTATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:....:x..:.::. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 24820147 NA +3061 chr4 + 190214555 26315150 26315149 26315203 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATGTATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:......:...x..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -59233270 -34997132 +3150 chr4 + 190214555 26316696 26316695 26316758 63 TGTATATATATATATACACACACACACATATCCGGCTAGTGGTGTTTTTGTTGTTTTTTTCCT chr4 + 94230402 41650599 41650598 41650661 41650599 41650598 41650661 63 TATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTTTTCTTCTT .:.........................:....:x::x...x:.x.:xx..:x.....:...:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -15333903 -78896499 +3137 chr4 + 190214555 26322648 26322647 26322693 46 TATAATATGTATATTATATATATATATACACACACACACGTAATAG chr4 + 94230402 30834195 30834194 30834240 30834195 30834194 30834240 46 TACAATATGTATTATATATATATATATACACACACACACACAGGAG ..:.........xx.........................::.:x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -4511547 -89718855 +3065 chr4 + 190214555 26336946 26336945 26336997 52 CCCCTGATGGTCTTTGTTTAGCGTTTTTTGTTTGTTTGTTTGTTTTTTGAGA chr4 + 94230402 32897757 32897756 32897808 32897757 32897756 32897808 52 CCTTTGAGATTCTTCATTTTGCTTTTTTTGTTTGTTTGTTTGTTTTCTGTGA ..::...x:x....::...x..x.......................:..x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -6560811 -87669591 +3145 chr4 + 190214555 26337648 26337647 26337701 54 TTCCTTGTGAAATATATACTTATAATTCTTTATCCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 83296373 83296372 83296426 83296373 83296372 83296426 54 TTCTTTGAAAAATACATACTGTCAGTTCTTTCTTCTTCTTCTTTTTTTTTTTTT ...:...x:.....:.....xx:.:......x.:...:..:............. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -56958725 -37271677 +3080 chr4 + 190214555 26352704 26352703 26352765 62 AACAACAACAACAAAAACCTCAAACAAAATCAAACAAAATCTATCCGTGGCGTTCTGGTAGG chr4 + 94230402 14795286 14795285 14795346 14795286 14795285 14795346 61 AACAACAACAACAAAAACCCCATACAAGTTAGGAATAAATCTATCCGT-GCGTCCTTTTAAG ...................:..x....:x.x::.xx............-....:..xx..:. 48M1D13M 48/61 78.7% 61/94230402 0.0% 1/61 1.6% 11557418 NA +3473 chr4 + 190214555 26378886 26378885 26378968 83 CATAATGGTGGGTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:.....x::.--....:.:.........:..:........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -49654311 -44576091 +3061 chr4 + 190214555 26381020 26381019 26381101 82 TTTGGTTTTTTTTTTTTGGTAGCAGTGTAATTACTATATTTTTCTGTATTCAAGAAAGTTTTTTCTTGTTTTTTTTTTTCCT chr4 + 94230402 36646783 36646782 36646864 36646783 36646782 36646864 82 TCTGTTTTTTTTTTTTTTGCAGCAGTTGTTATATCCTAATTTCAAATATTCAAGAAAGCTATTTTTTCGTTGTTCTTTCTCT .:..x............x.:......xxxxx..::x..x...:xx:............:.x...:..xx..x..:...::.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -10265763 -83964639 +3229 chr4 + 190214555 26384762 26384761 26384900 139 CTATTCCCTCTCCTCCTC---TCTCCTCTCCCCTCTCCCCCTCCCCTCTCGCCTCTCCCCTCTCCCCCTCCCCTCTCACCTCTCCC--------CTCCCGC-CTCTTGCCTCTCCCCTCCCGCCTCTCGCCTCTCCCCTCTCCCCTCTTGC chr4 + 94230402 30502818 30502817 30502968 30502818 30502817 30502968 151 CTTTTCCTTTGCTTCCCCAACTCATCTTTCTACCTCCCACATCCAACCCCACACCTCCCTCCTCCCCCCCCCATCTCACCTCTCCAGAGCACAGCTGCAGCACTCCTGCACCTTTCACCCCACGTCCTCCCCAAAAGCATTGCCCTCCTGC ..x....:.:x.:...:.---..x:..:..:x.:::..x.x...xx:.:.:.x:.....::.......:...x............x--------..x.x..-...:...x:..::.x:...:.x..::x..:xxxxx.x:.x.....:... 18M3I65M8I7M1I49M 87/139 62.6% 151/94230402 0.0% 12/139 8.6% -4118056 -90112346 +3136 chr4 + 190214555 26431173 26431172 26431244 72 AGAAGCCACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAATCAAAATGTATAAATATTGGAAA chr4 + 94230402 58631195 58631194 58631266 58631195 58631194 58631266 72 AGCAGCCATGGCAGAAAAAAAAAAAGGAGAGAAAACAAAGGGAAAAACTTCATAAAGTGCAAAGGGCAGAAA ..x.....::.:.:...........::.:.:....x....::.....xx...x..x..::...x:x::.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -32200022 -62030380 +3036 chr4 + 190214555 26445821 26445820 26445874 54 AAACTCCGTCTCAAAAAAAAAAAAAAAAAAATATGTATATATATATATATATAT chr4 + 94230402 88547312 88547311 88547362 88547312 88547311 88547362 51 AAACTCC---TCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT .......---..................xx....:...:...:.:.:.:..... 7M3D44M 43/51 84.3% 51/94230402 0.0% 3/51 5.9% -62101491 -32128911 +3269 chr4 + 190214555 26451751 26451750 26451826 76 TTATACCCATTTCATAGATGAGGAAACTGAGGCACAGAGAAGCTAAATGATGTGACTAAGGGGACGATGTCAATGA chr4 + 94230402 82283120 82283119 82283195 82283120 82283119 82283195 76 TTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGA .....x:.........x...:........:.:.....:x.:::...:...:xx:x......xx..:xx..:.:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -55831369 -38399033 +3066 chr4 + 190214555 26460880 26460879 26460927 48 AGCTTGACTTTCTTTATTTCTTTTTTTTAATTTATTTTTTTCCCTTCA chr4 + 94230402 73451410 73451409 73451457 73451410 73451409 73451457 48 AGTATGACTTCCTTTCTTTTTTTTTTCCATTTTATTTTTTTTCCTTCA ..:x......:....x...:......::.x...........:...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -46990530 -47239872 +4053 chr4 + 190214555 26466494 26466493 26466573 80 CATGGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGCTG chr4 + 94230402 76033197 76033196 76033274 76033197 76033196 76033274 78 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::..........--....:.:...........::........x.xx.x...x.:...........:..x:xx:..... 14M2D64M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% -49566703 -44663699 +10626 chr4 + 190214555 26467732 26467731 26468003 272 GAAGAATAGGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGAGAAGGAGGAGGAGAAGGAGAAGG-AGGAGGAGAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGAAGGAGAA-GGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAAGAGGAGGAGGAGGGGAAGAAGAAGAAGGAGGGGAAGAGGAAGGAGAAGGAGGGGAAGGGGAAGGAGAAGGAGAAGAGGAAGAGGAAGAAGAAGAAGAAAGAGGAAGAAGAAGAAGAAGAA chr4 + 94230402 1500702 1500701 1500970 1500702 1500701 1500970 269 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaag----ggggggggaggagaggaaggggaaaaaagaaaatg-gagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAA .:.::.x.:...:.:x..::........x..:..:.:.:......:..:x..:.::.....:.:x...:.:x.:-.x....:...x..::::.:.....x.:....:..:.....:..:..-....:x......:...:..:.----..:..::......::.:.......:..::.:..x.-.:.:....:.::...:.:.:..:.......:..:..:..:..:..xx..:.:..:.:.:.:..:.x:::..:.:.x....::.:.:..... 74M1I46M1I21M4D35M1D91M 175/267 65.5% 269/94230402 0.0% 7/267 2.6% 24967030 NA +3297 chr4 + 190214555 26467778 26467777 26467842 65 AAGGAGAAGGAGGAGGAGAAGGAGAAGGAGGAGGAGAAGAAGAAGAAGAAAAAGAAAAAGAAGAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ..:.x.......xx:x.:.:.:...:..::........:..:..:....:.........:x:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -2546895 -91683507 +4158 chr4 + 190214555 26467877 26467876 26468048 172 GGAGGAAGAGGAGGAGGAGGGGAAGAAGAAGAAGGAGGGGAAGAGGAAGGAGAAGGAGGGGAAGGGGAAGGAGAAGGAGAAGAGGAAGAGGA--AGAAGAAGAAGAAAGAGGAAGAAGAAGAAGAAGA-----AAGCGGGAAGAGGAGGAGAAGGTGTAGAGGAGAAGGAGGAGAGAGA chr4 + 94230402 34805282 34805281 34805459 34805282 34805281 34805459 178 GAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATG-AGGGAAGAAGGCAGAGGAAAA .:....::...:xx:....x..:::....x..:.:....:..:.::..x.x...::.x...:x:x.:.x.:x:...x.x:.:.:...:..x.--:.:.x.:..x:..:.......x.:..x.x.::..-----...:.xx..::::.:.....::..-..:.:......x:...::.:. 92M2I34M5I24M1D21M 102/171 59.6% 178/94230402 0.0% 8/171 4.7% -8337405 -85892997 +3521 chr4 + 190214555 26477443 26477442 26477521 79 GTGGCGGATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCGCTTGACCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x.:.--..................::........x.xx.x...x.:.....x.....:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -49555758 -44674644 +3048 chr4 + 190214555 26477567 26477566 26477663 97 GAAACTACATGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAAAAAGGAAAGAAAGAAACCCATAGAGTAGAT--GTAGCAGCCCCAAACTC chr4 + 94230402 42662999 42662998 42663097 42662999 42662998 42663097 99 GAAAATATAGGGATAAAAGAAAAAAGCAAAAAAAAAAAGAATCAACAGAAAGAATGTAAACAAAGAACTTGAGAGTAGATAAATGGCCTCCTGAAATTC ....x..:.x.xxx....:......:x..............xx..x.....:.:x:x.:.x.:.:.x.:xx.........--:.:..xx..:x...:.. 80M2I17M 65/97 67.0% 99/94230402 0.0% 2/97 2.1% -16185432 -78044970 +3309 chr4 + 190214555 26492290 26492289 26492376 87 TCCTTCCTTCCTTTCCTTTCC---------TTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCT--------TTCTTTCCTTTCTTCCCTCCCTCCCTCCT chr4 + 94230402 92183491 92183490 92183594 92183491 92183490 92183594 104 TCCCACCTGTCGTTCCTCCTCAAGGCGGATTCTTTCCTCTTCTTTCCTCCTTTCCTCCTCTCTCTTTGACTCAAGTTTTCTCCGTTCTTCTCGCTCTGCTTCCT ...:x...x:.x.....:::.---------.:.:.:.:..:.:...........:.:........:.--------..:.:...x......:.x.:..x.:.... 21M9I37M8I29M 62/87 71.3% 104/94230402 0.0% 17/87 19.5% -65691201 -28539201 +3612 chr4 + 190214555 26492354 26492353 26492479 126 CCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC---TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x:.:.:....:.:..xx:x..:.:.:.:.:....:.:x..::...x....xx.....x.:.:xxx..:..x...::.:x.xx:.....---...:.....::...:.:...:....:.x.:. 92M3D31M 75/123 61.0% 123/94230402 0.0% 3/123 2.4% -37204763 -57025639 +3526 chr4 + 190214555 26492388 26492387 26492484 97 TTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTT chr4 + 94230402 38895915 38895914 38896011 38895915 38895914 38896011 97 TTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTT ....::..x.x.:.:x...:...:..:......x.x:...............x:x.x::x:.::.......::.:..xx..x..:::.x..:x.... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% -12403527 -81826875 +3029 chr4 + 190214555 26492411 26492410 26492462 52 CTTTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTC chr4 + 94230402 25163667 25163666 25163718 25163667 25163666 25163718 52 CTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ..::....::.....x...x......:...:....::.:........:.::. 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 1328744 NA +3230 chr4 + 190214555 26492447 26492446 26492512 66 TTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCT--------TTCTTTCCTTTCTTCCCTCCCTCCCTCCT chr4 + 94230402 92183521 92183520 92183594 92183521 92183520 92183594 74 TCTTTCCTCTTCTTTCCTCCTTTCCTCCTCTCTCTTTGACTCAAGTTTTCTCCGTTCTTCTCGCTCTGCTTCCT .:.:.:.:..:.:...........:.:........:.--------..:.:...x......:.x.:..x.:.... 37M8I29M 49/66 74.2% 74/94230402 0.0% 8/66 12.1% -65691074 -28539328 +3319 chr4 + 190214555 26492499 26492498 26492563 65 CCTCCCTCCCTCCTTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCC chr4 + 94230402 25163654 25163653 25163718 25163654 25163653 25163718 65 CCCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ..:...x...:.x:.:.:.......:.:x..:x..:..........::.:.......:..:::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 1328845 NA +3167 chr4 + 190214555 26492507 26492506 26492611 105 CCTCCTTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTC chr4 + 94230402 38895908 38895907 38896012 38895908 38895907 38896012 105 CCTCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTTC ....::..:.:::..x.x.:::x.:.:...:..:......x.x:...............x:x.x:.x.:.::.:::.:..:.::xx.:x:.....x:.:x..... 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% -12403401 -81827001 +3232 chr4 + 190214555 26492581 26492580 26492670 90 TCCTTCCTTCCTTCCTTCCTT--------TCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCT--------TTCTTTCCTTTCTTCCCTCCCTCCCTCCT chr4 + 94230402 92183491 92183490 92183594 92183491 92183490 92183594 104 TCCCACCTGTCGTTCCTCCTCAAGGCGGATTCTTTC--CTCTTCTTTCCTCCTTTCCTCCTCTCTCTTTGACTCAAGTTTTCTCCGTTCTTCTCGCTCTGCTTCCT ...:x...x:.x.:.:....:--------.:.....--.:..:.:...........:.:........:.--------..:.:...x......:.x.:..x.:.... 21M8I7M2D31M8I29M 65/88 73.9% 104/94230402 0.0% 18/88 20.5% -65690910 -28539492 +4104 chr4 + 190214555 26492626 26492625 26492808 183 TTCTTTCTCTCTCTCTTTCTTTCCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCT--CTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTTCCTTTCTTCCC-TCCCTTCCTCCTTTCT--------TTCTCTCTCTCTTTC----TTTCCTTTCTTCCCTCCATCCCTCCTTTCTTT chr4 + 94230402 61081208 61081207 61081403 61081208 61081207 61081403 196 TCTTTTCTAATTCTCTTTTTATGCCTTCTTC--TCCCCTCAGATTTCCTTTGCCTAATCTTATTTCTGTTCTTTTTTCTTACTACTTTGCCTCTATTTCCTTCTAAACTAACCTGCTTTCCCATCACCTGCTCTATTCTGCACTAATTTATTTTTCATTTCCAGCAGTTCCTTCCTCCCTTCTAGCCCTCACTTCTCT .::.....xx:.......:.x.x.:......--....::.xxx:..:....x:..--::..x.....x.:::.:......x..x::..x.:.:.x:.......:xxx..xx...x::.....-..x.:.x...:x....--------..x.:.:..x:..:.----x......:..:..:..:.x.....x:....:. 31M2D22M2I65M1I16M8I15M4I32M 117/181 64.6% 196/94230402 0.0% 17/181 9.4% -34588582 -59641820 +3465 chr4 + 190214555 26492648 26492647 26492769 122 CCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTT----CTTTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC---TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x:.:.:....:.:..xx:x..:.:.:.:.:....:.:x..::...x....xx.....x.:.----.:...x...::.:x.xx:.....---...:.....::...:.:...:....:.x.:. 65M4I23M3D31M 75/119 63.0% 123/94230402 0.0% 7/119 5.9% -37204469 -57025933 +3397 chr4 + 190214555 26492682 26492681 26492778 97 TTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTTTCTT chr4 + 94230402 38895915 38895914 38896011 38895915 38895914 38896011 97 TTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTT ....::..x.x.:.:x...:...:..:......x.x:...............x:x.x.:x:::......:.:::::.xx..x...::.x..:x.... 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% -12403233 -81827169 +3423 chr4 + 190214555 26492794 26492793 26492922 129 ATCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCATCCATCCTTCCTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTTTTTTTTT chr4 + 94230402 37898146 37898145 37898272 37898146 37898145 37898272 127 ATTACTTCTGTCTGCTTTTCTTT--TTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTTT ..:x..:..x...x:..:.....--......x.....x......x..:x.::::.x....xx...:x.:...x:.xxx.::x..x:...:..xx.x.:.....x::x..x...:.:...x....x.... 23M2D104M 81/127 63.8% 127/94230402 0.0% 2/127 1.6% -11405352 -82825050 +3469 chr4 + 190214555 26492800 26492799 26492913 114 CCTTTCTTTTTCTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCC--ATCCATCCTTCCTTCCTTCCTTCCTTCTTTCTTCTT-TCTTTCTTTT chr4 + 94230402 38895897 38895896 38896013 38895897 38895896 38896013 117 CCTTTGCATCACCTCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTTCT .....x:x.:x.:::.::....::..x.x.:.:x...:...:..:......x.x:.............--..x:..:x:.:..:...:.::.:..xx..x..:...-..:x....:. 68M2I36M1I10M 73/114 64.0% 117/94230402 0.0% 3/114 2.6% -12403097 -81827305 +3394 chr4 + 190214555 26492828 26492827 26492911 84 TCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCATCCATCCTTCCTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 5308273 5308272 5308356 5308273 5308272 5308356 84 TTTTTCTTTCTGTGCTTTTTCCTTTTCTGCCTCTCTGCCCATCCAGGCTCGCTTCTTTCCACCCTCCTTCCACTTCTCTTTGTT .:.:.......x.x:..:..:......:x:.::..:x:.......xx..:x....:....x:...:...:.x::.:.....x.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 21184555 NA +3634 chr4 + 190214555 26517783 26517782 26517865 83 CATGGTGGCAGACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::x...--....:.............::........x.xx.x...x.:...........:..x:xx:..:..x.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -49515414 -44714988 +3789 chr4 + 190214555 26526645 26526644 26526755 111 AATTCCTTCTTAAAAAAAAAAAATAATATATATATATACACATATATATATACATATATATATATACA----CATATATATATACATATATATATATACACATATATATACATAT chr4 + 94230402 29286169 29286168 29286279 29286169 29286168 29286279 111 AATTCCTTC----AAGAGGACTATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT .........----..:.::.xx...x:.....:...:..:..x.x::.......x...x.x.x.....----..:.x............x.:...x..:x:...::...x:..:. 9M4D55M4I43M 76/107 71.0% 111/94230402 0.0% 8/107 7.5% -2759524 -91470878 +3486 chr4 + 190214555 26526658 26526657 26526739 82 AAAAAAAAAATAATATATATATATACACATATATATATACATATATATATATACACATATATATAT-ACATATATATATATAC chr4 + 94230402 58988593 58988592 58988675 58988593 58988592 58988675 83 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATGACAAATTTATTCTTAC ......:....x...........:......:......x....:.x.xx...x:..:x....xx...-...x..x...x:x... 66M1I16M 62/82 75.6% 83/94230402 0.0% 1/82 1.2% -32461935 -61768467 +3170 chr4 + 190214555 26526660 26526659 26526720 61 AAAAAAAATAATATATATATATACACATATATATATACATATATATATATACACATATATA chr4 + 94230402 58988593 58988592 58988653 58988593 58988592 58988653 61 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATA ......:.x.x................:..:......x.:..:.x.xx...x:...x.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -32461933 -61768469 +3257 chr4 + 190214555 26526685 26526684 26526773 89 CATATATATATACATATATATATATACACATATATATATACATATATATATATACACATATATATACATATATATATACATATATATAT chr4 + 94230402 29286191 29286190 29286279 29286191 29286190 29286279 89 CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT ......:...:..::.x.x::.......x...x.x.x.....xx:x:.:.x...:.:.:....x.::..x...x.....:...x...:. 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% -2759506 -91470896 +3338 chr4 + 190214555 26526700 26526699 26526785 86 ATATATATATACACATATATATATACATATATATATATACA--CATATATATACATATATATATACATATATATATACATATATATAT chr4 + 94230402 29286192 29286191 29286279 29286192 29286191 29286279 88 ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT .....:...:..:..x.x::.......x...x.x.x.....--.x:.:.x...:...:....x.::..x...x.....:...x...:. 41M2I45M 61/86 70.9% 88/94230402 0.0% 2/86 2.3% -2759492 -91470910 +3030 chr4 + 190214555 26526705 26526704 26526812 108 TATATACACATATATATATACATATATATATATACACATATATATACATATATATATACATATATATATACATATATATATATATATACACATATATATACATATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:.::::.:.x.x.:.:x:::...x.....::..x:.:......x::.:..:x..:.::...:..:x...::x.x.:.:.....::::..:x....:...::.:. 108M 60/108 55.6% 108/94230402 0.0% 0/108 0.0% 5417511 NA +3200 chr4 + 190214555 26526711 26526710 26526798 88 CACATATATATATACATATATATATATACACATATATATACATATATATATACATATATATATACATATATATATATATATACACATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x:.x:x.x.:.:.:....x.....::.x.:....::...:.x.x....:.....x::.:.:.:.....::..:...:.. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 3926530 NA +3090 chr4 + 190214555 26526759 26526758 26526865 107 TATACATATATATATACATATATATATATATATACACATATATATACATATATATATACATATATATATACATATATATATATATATACACACACATATATATATAC chr4 + 94230402 21109194 21109193 21109300 21109194 21109193 21109300 107 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCAC .......:.:.:.x.x::.:x:::...x.....::..x:.:......x::.:..:x..:.::...:..:x...::x.x.:.:.....::::.::x....::..::.. 107M 60/107 56.1% 107/94230402 0.0% 0/107 0.0% 5417565 NA +3005 chr4 + 190214555 26526782 26526781 26526852 71 ATATATATATACACATATATATACATATATATATACATATATATATACATATATATATATATATACACACA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.:....x.....::.x.:....::...:.x.x....:.....x::.:.:.:.....::..:...::. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 3926584 NA +3110 chr4 + 190214555 26526845 26526844 26526918 74 TACACACACATATATATATACGTATATATATATATACACACACATATATATACGTATATATATATATATATATA chr4 + 94230402 20811747 20811746 20811820 20811747 20811746 20811820 74 TACACAGAAAAACATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTACA ......x.x.x.:...xx..x:.x.x...xx.........x.x.......:..xx........:.....:..:. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 5715098 NA +3040 chr4 + 190214555 26559281 26559280 26559348 68 TTATTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTTTTTTGGCGGGGGGGATAGTAGC chr4 + 94230402 8984611 8984610 8984678 8984611 8984610 8984678 68 TTATTATTCTCTGTGTGTGTGCGTGTGTGTGGTTTTGTGTTTTGTCTTTTCTAGGTCAGGGCAGTAGC ........x.x..........:.........xx.x.....xx.x.:....xxx..xx:..::...... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 17574670 NA +3285 chr4 + 190214555 26565648 26565647 26565730 83 CATGATGGCACATGCCTATATTCTCAGCTACTTGGGAAGCTGAGGTGGGAGGACCACTTGAGCCCAGAAGATTGAGGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...::..:.--.:..x.::..........::.:......x:xx.x.:.x.......:........x..x:....::.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -49467549 -44762853 +3167 chr4 + 190214555 26574421 26574420 26574487 67 TGTAATCCCAGCTACTTGGGAGGCTGAGTGGGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........:xxx.x...x..........::.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -49458790 -44771612 +3527 chr4 + 190214555 26584430 26584429 26584485 56 AACAAAAACAAA-AACAAAAACAAAAACAAAACAAAACAAAAAAACCCCACCTCCCT chr4 + 94230402 7735345 7735344 7735401 7735345 7735344 7735401 57 AATAAAAGCAAACAACAAAGACAAAAAGAAAAGAAAACAAACAAACCCCACTCCCCT ..:....:....-......:.......x....x........x.........::.... 12M1I44M 48/56 85.7% 57/94230402 0.0% 1/56 1.8% 18849085 NA +3355 chr4 + 190214555 26601066 26601065 26601177 112 ATCCTTTTAAAATATCACTTCTGTTTTAGCTTTTTGTTTAT--------ATATTTTATATATATTGTGTATGTCTATATATATATATACATATATACATAGAGAGAGACATATATAAGCA chr4 + 94230402 56867237 56867236 56867355 56867237 56867236 56867355 119 ATTGTTTCAAAATAACA-TTCAGTGCCTGCTTCTGGTTATTCCAGCTTAATATTTTATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTA ..:x...:......x..-...x..x::x....:.x...xx.--------..........:.........:..xx..:...:.:.......:xx...:..xx:x:x.x::.....:...:. 17M1D23M8I71M 76/111 68.5% 119/94230402 0.0% 9/111 8.1% -30266171 -63964231 +3035 chr4 + 190214555 26667986 26667985 26668062 77 ATCTCCATATTAAAGTAGAGGATGTGGAGATGTTAAGTAACTTGCTCCAGGTCACAAAACTAGTAAGTGGTAGAGCC chr4 + 94230402 13918102 13918101 13918178 13918102 13918101 13918178 77 ATTTCCAAATAGAAAAGCAAGGTGTTGGAATGATACGTGACTTGTTCCAGGTCACAAAGGGAGAAAACTGCAGAACC ..:....x..x:..:x:x.:.:...x.::...x..x..:.....:.............:xx..x..::x.:...:.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 12749884 NA +3081 chr4 + 190214555 26673363 26673362 26673497 135 TAAGAAATTTGGGGTTTCCGTAGCTATGAATTAACTTGATAATGGAATCTAAAAATTATTTC--ATATATATATATATATATATATACACACACACACACACACACACACACACAATACTAGTTTCAGATCCATGGA chr4 + 94230402 85078452 85078451 85078582 85078452 85078451 85078582 131 TATGTGATTTTGCGTCTGTAAAGTTAAGAATTCACC-ATTAAAGGACTTT-----TCACTCCTAATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTGAAAGATTGTGTTACATCACTGGA ..x.x:....x.x..:.x::x..:..x.....x..:-:x...x...x.:.-----.:.:.:.--.......:.x....x.......................xx.x.x:..:xx..x:x.x..x.:.x...xx.... 36M1D13M5D7M2I73M 87/129 67.4% 131/94230402 0.0% 8/129 6.2% -58405089 -35825313 +3036 chr4 + 190214555 26673428 26673427 26673467 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 22264346 NA +3069 chr4 + 190214555 26681422 26681421 26681497 76 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGGAGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGGTTGCAGTGCA chr4 + 94230402 76033206 76033205 76033281 76033206 76033205 76033281 76 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA ....x......:.........:.::......::x.xx.x...xx:.x.........:..x:xx:..:..:..x:.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -49351784 -44878618 +3066 chr4 + 190214555 26686991 26686990 26687046 56 GATGGTAAACATTTATTATTTGTCTTCTTTTTTGTTTGTTTGTTTGTTTTTTGAAG chr4 + 94230402 35494716 35494715 35494771 35494716 35494715 35494771 56 GAAGACAATCCTTTATCATTAGTCCTTTTTTTTGTTTGTTTGTTTTTTCTCTTAAG ..x.::..x.x.....:...x...:.:..................x..:.:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -8807725 -85422677 +3017 chr4 + 190214555 26687012 26687011 26687061 50 GTCTTCTTTTTTGTTTGTTTGTTTGTTTTTTGAAGTTTTGATTTTTGTAT chr4 + 94230402 37941530 37941529 37941579 37941530 37941529 37941579 50 GCCTTCTATTTTGTTTGTTTGTTTGTTTTAAGCAGTGTTGTTTCTTGTGT .:.....x.....................xx.x...x...x..:....:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -11254518 -82975884 +3221 chr4 + 190214555 26693558 26693557 26693637 80 AGTGGCATGCACCTGTTGTCCCAGCTACTCAGGAGGCTGAGATGCGAGGATCACTTTTGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.....x...x..:.........::::........x:x:.x.:.x.....xx:.....:..x.:x:.....:.. 5M2D73M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% -49339642 -44890760 +3055 chr4 + 190214555 26734787 26734786 26734953 167 CTATTGACTTTCTGAGAC-CATTATAATTAGTTCTTAAACTTAATTCTGTGATCTGTCTCGTTATGTTTTTGTCCTGTTGTTTTGTGTGTGTATATGTATACGTATGTGTGTGTATATATACACACATGTGTACATACACATATATGTGTGTATATATGTATACACAT chr4 + 94230402 85834465 85834464 85834615 85834465 85834464 85834615 151 CTGTTGACTTTCTGTGATACAGCTTTATTAATACCTACCTT----------ATTTGCCAGAATGTAGTTTGG-------GTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:...........x..:-..x:x.x....:.x.:..xx:.----------..:..:.xx:x.:.:x...x.-------.....x.:.x::.x.:...x.::..:.........:...xx.:::.x:::.::.:..::.x...:....x.:.::.:.::..:...... 18M1I22M10D21M7D89M 91/150 60.7% 151/94230402 0.0% 18/150 12.0% -59099678 -35130724 +3378 chr4 + 190214555 26734863 26734862 26734956 94 TTGTTTTGTGTGTGTATATGTATACGTATGTGTGTGTATATATACACACATGTGTACATACACATATATGTGTGTATATATGTATACACATATG chr4 + 94230402 85834523 85834522 85834616 85834523 85834522 85834616 94 TTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...xx..x.x.:.x:..x...:.x:..:.........:.:...xx.:::.x.::......:::.x...::...x...::.:::.......:... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -59099660 -35130742 +3018 chr4 + 190214555 26734910 26734909 26734960 51 ACATGTGTACATACACATATATGTGTGTATATATGTATACACATATGTATA chr4 + 94230402 44815601 44815600 44815651 44815601 44815600 44815651 51 ATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .::.....:......:..:x............x...x........:::.:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -18080691 -76149711 +3097 chr4 + 190214555 26734928 26734927 26735004 77 ATATGTGTGTATATATGTATACACATATGTATATGTATATATGTATACACATATGTATATGTATATATGTATACACA chr4 + 94230402 92344699 92344698 92344774 92344699 92344698 92344774 76 ATATCTATGCAAA-ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ....x.:..:.x.-..:........x..x:...............:...x.x::::xxx....:.........:x.. 13M1D63M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% -65609771 -28620631 +3097 chr4 + 190214555 26734928 26734927 26735004 77 ATATGTGTGTATATATGTATACACATATGTATATGTATATATGTATACACATATGTATATGTATATATGTATACACA chr4 + 94230402 92341558 92341557 92341633 92341558 92341557 92341633 76 ATATCTATGCAAA-ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ....x.:..:.x.-..:........x..x:...............:...x.x::::xxx....:.........:x.. 13M1D63M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% -65606630 -28623772 +3452 chr4 + 190214555 26734981 26734980 26735041 61 TGTATATGTATATATGTATACACATATGTATATGTGTATACACATGTATATATGTATATGT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.....::..::........:...:.........x.x......::.:.......:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -28959467 -65270935 +3113 chr4 + 190214555 26734985 26734984 26735076 92 TATGTATATATGTATACACATATGTATATGTGTATACACATGTATATATGTATATGTGTACACACATGTATATATGTATATATGTATACACA chr4 + 94230402 92344692 92344691 92344774 92344692 92344691 92344774 83 TATTTGAATATCTATGCAAA---------ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ...x.:x....x...:..x.---------:.:........x:.x:..........:........x.x.:.:xxx....:.........:x.. 20M9D63M 60/83 72.3% 83/94230402 0.0% 9/83 10.8% -65609707 -28620695 +3113 chr4 + 190214555 26734985 26734984 26735076 92 TATGTATATATGTATACACATATGTATATGTGTATACACATGTATATATGTATATGTGTACACACATGTATATATGTATATATGTATACACA chr4 + 94230402 92341551 92341550 92341633 92341551 92341550 92341633 83 TATTTGAATATCTATGCAAA---------ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ...x.:x....x...:..x.---------:.:........x:.x:..........:........x.x.:.:xxx....:.........:x.. 20M9D63M 60/83 72.3% 83/94230402 0.0% 9/83 10.8% -65606566 -28623836 +3370 chr4 + 190214555 26735032 26735031 26735142 111 ATGTATATGTGTACACACATGTATATATGTATATATGTATACACATGTATATATGTATACACATGTATATATGTATATATGTATACACATGTG----TGTGTATATTTGTATACA chr4 + 94230402 76376858 76376857 76376971 76376858 76376857 76376971 114 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGA-AAATGTGCCTCTCTGTGTGCTTGTTTACA ...:...:x.x.x:...:...:.x.x..::..:....:.....x.xx..:x.:........:....::....:x.:.x..:x.x.-.x.....----.x...:.::....x.... 85M1D7M4I18M 74/110 67.3% 114/94230402 0.0% 5/110 4.5% -49641826 -44588576 +3186 chr4 + 190214555 26735059 26735058 26735120 62 TGTATATATGTATACACATGTATATATGTATACACATGTATATATGTATATATGTATACACA chr4 + 94230402 47135177 47135176 47135238 47135177 47135176 47135238 62 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACA ...:......:.........x..xx:.x...::........:.:....:.:.:::.::.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -20400118 -73830284 +3600 chr4 + 190214555 26761997 26761996 26762078 82 ATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGATGAAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....::..:.--....:.:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 13M2D67M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% -49271201 -44959201 +3315 chr4 + 190214555 26778417 26778416 26778502 86 AAAAAAAGAAAGAAAGGAAAGAGAAGGGGAGGGAAGGGGGAAGGGAAGGGG------------------------GAAGGGAAGAAGGAAAGGAAAAAGGAAAGGAAAGA chr4 + 94230402 1500704 1500703 1500813 1500704 1500703 1500813 110 AAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaa ..:.:.......:x:..::::.....x.::.......:....:::..x:..------------------------..:.....x..:.:........x.....::...:. 51M24I35M 60/86 69.8% 110/94230402 0.0% 24/86 27.9% 25277713 NA +3510 chr4 + 190214555 26808600 26808599 26808671 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx:.........:.:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -49224606 -45005796 +3724 chr4 + 190214555 26817828 26817827 26817928 101 CGTGGTGGTGCGTGCCTATAATCCCAGCCACTTGAAAGGCTGAGACAGGAGAATCTCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::.......::.--.:..:.:.....:...............x.xx.x...x.x...........:..x:xx:..:..:..------..x..x...... 14M2D67M6D12M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% -49215369 -45015033 +3114 chr4 + 190214555 26826072 26826071 26826131 60 TGCACCTGTAATCCCAGCTACACAGGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:........x::::........x.xx.x...x::...........:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -49207133 -45023269 +3359 chr4 + 190214555 26831542 26831541 26831603 62 TCCCTTTATTTTCCTTTTTCTTTCTTTCTTTTTCTTCTTTTTTTTTTTTCTTTTTTTTTTTT chr4 + 94230402 61949728 61949727 61949789 61949728 61949727 61949789 62 TCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTT ...:..:..x:...x.::.:x.......:xx.x........:...:................ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -35118186 -59112216 +4119 chr4 + 190214555 26842499 26842498 26842657 159 GGCTTTCCTTCTCCTTCCTTCCCTTTCTTCCCTTCCTTCCCTCCCTCCCTCCCTCCCTCTTTCTTTCCTTTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTC chr4 + 94230402 50176264 50176263 50176415 50176264 50176263 50176415 152 GATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTA--TCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTT-----TTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .::....:x....x:.x..::..........:..x--...x:..x::::.x.x.:x:.......x.:....x:x...x.::-----..x::.............:xxxx.::x.:.:.::x:......x::.:...::.........::.:.x...... 35M2D44M5D73M 94/152 61.8% 152/94230402 0.0% 7/152 4.6% -23333765 -70896637 +3072 chr4 + 190214555 26842523 26842522 26842617 95 TTCTTCCCTTCCTTCCCTCCCTCCCTCCCTCCCTCTTTCTTTCCTTTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:.::x...x::x:..::x..::..:xx...:.........::....x...xx.:..x:::..x:x.:.....x.....::..::.:...... 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% -56484411 -37745991 +3261 chr4 + 190214555 26842560 26842559 26842671 112 TCTTTCCTTTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTCTTTTTCTTTCTTCTTTCCTTTCTTTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.x.:.:.:.....:.:xx:x:::.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..:::.::......::.......:.x.:. 64M5I11M5I37M 71/112 63.4% 122/94230402 0.0% 10/112 8.9% -36854558 -57375844 +3037 chr4 + 190214555 26842563 26842562 26842648 86 TTCCTTTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT chr4 + 94230402 14749346 14749345 14749431 14749346 14749345 14749431 86 TTCATTTTCTTTCCCCCCTTACTCATTTTATCTCCTCTTTCAGTGCATTTTTCCTTTCTAATTTTCATATTTTTTTTCCACCTCTT ...x.....:....:....:x..:x:...x.:..:.::..:xx.x.x..:..:......xx:....x.x:...:....:x:..:.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 12093217 NA +3022 chr4 + 190214555 26842566 26842565 26842650 85 CTTTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .....:...:::::x.....x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x...:.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% -30529460 -63700942 +3645 chr4 + 190214555 26842568 26842567 26842679 112 TTTCCTTCCTCCCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCCTTTCTTTCTCTTATTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.::....::.:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx.....:...::.:.....:.......:..:..xx... 60M6I52M 72/112 64.3% 118/94230402 0.0% 6/112 5.4% -36854554 -57375848 +3162 chr4 + 190214555 26842581 26842580 26842682 102 TCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCCTTTCTTTCTCTTATTTTTTT chr4 + 94230402 63697123 63697122 63697224 63697123 63697122 63697224 102 TCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTT ...::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:.:x:xx:......:..:.:.x....:.. 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% -36854542 -57375860 +3027 chr4 + 190214555 26842621 26842620 26842684 64 TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCCTTTCTTTCTCTTATTTTTTTGT chr4 + 94230402 71033452 71033451 71033515 71033452 71033451 71033515 64 TCTCCTAATTTCTTTTTTTTTCTTTTTTTCTGTTGTCTGCTCTTTATTGCTCTTACTGTTTTGT .:..:.xx.......:...:.:.:.......x.:x...x::....x..x......:.x...... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -44190831 -50039571 +3285 chr4 + 190214555 26850286 26850285 26850369 84 CACCTATAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCGCTTGAGCCCAGGAGCTCCAGACAGCCTGGGAAACATGGTG chr4 + 94230402 76033207 76033206 76033286 76033207 76033206 76033286 80 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG----CTGTAGAACATGATG ...x.:..:.:.....xx:...::........x.xx...:.x.:.....:.....:....:::.:----...x::......:.. 65M4D15M 55/80 68.8% 80/94230402 0.0% 4/80 5.0% -49182921 -45047481 +3143 chr4 + 190214555 26865990 26865989 26866056 67 TTTTTTTTTTTCCTTCTAACTTTTATTTTAGATTCATTTTAGATTCCAACTTTTATTTTAGATTCAT chr4 + 94230402 83974412 83974411 83974476 83974412 83974411 83974476 65 TCTTTTTTTTTCTTTC--ATTTTTATCTTAAATTGATTTCTTTTTTCACTTTCTATTTTAGCTTCAT .:..........:...--.:......:...:...x....:xxx..:..x:..:........x..... 16M2D49M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% -57108422 -37121980 +3096 chr4 + 190214555 26890684 26890683 26890753 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -49142513 -45087889 +3030 chr4 + 190214555 26904227 26904226 26904297 71 GTTTTTTGTTTGTTTCTTTGTTTTGTTTTTTAAACATTTTTTCAGGTATAATTGACAGACAATAAATGATT chr4 + 94230402 67714720 67714719 67714790 67714720 67714719 67714790 71 GTTTTTTGTTTATTTTTTGGTTTTGCTTTTTGTGAATTTATTTAAACATTATTGGCTGTTATTATATAACT ...........:...:..x......:.....:x:x....x..:.:::..x....:.x.x:.x..x..:.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -40810493 -53419909 +3480 chr4 + 190214555 26934054 26934053 26934123 70 CGTGGTGGCACGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....::.:..--....:.:...........::........x.xx:x...x.............:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -49099143 -45131259 +3109 chr4 + 190214555 26976673 26976672 26976746 74 GCGCACCTGTAATTCCAGCTACTCGAGAGGCTGAGGCACGAGGATTGTTTCAACCTGGGATGCATAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:...........:..:........x.x:.x.:.x:::..x....::.:.xx:x.:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -49056531 -45173871 +3441 chr4 + 190214555 26998773 26998772 26998855 83 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGA chr4 + 94230402 76033201 76033200 76033278 76033201 76033200 76033278 78 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ......-......----....:...........::........x.xx.x...x::.........:.:..x:xx:..:..:... 6M1D6M4D66M 59/78 75.6% 78/94230402 0.0% 5/78 6.4% -49034428 -45195974 +3056 chr4 + 190214555 27028771 27028770 27028818 48 TTTTCTTTCCACGCCCCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 5672110 5672109 5672157 5672110 5672109 5672157 48 TTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTT .......x..x.x......x:.:.................x.:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 21356661 NA +3281 chr4 + 190214555 27028772 27028771 27028821 50 TTTCTTTCCACGCCCCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 44835507 44835506 44835556 44835507 44835506 44835556 50 TTTCTTTCCCCGCCCCCCCCCCCTCTATTTTCTTTCTTTTTTTTTTTCCG .........x.........:.::.:.x....:...:...........::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -17806735 -76423667 +3019 chr4 + 190214555 27028774 27028773 27028819 46 TCTTTCCACGCCCCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757812 53757811 53757857 53757812 53757811 53757857 46 TCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ..:::..x.x.........:........::.......:........ 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -26729038 -67501364 +3037 chr4 + 190214555 27028968 27028967 27029011 44 TCTTTTATTATTATTATTGGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 22617887 22617886 22617930 22617887 22617886 22617930 44 TTTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTTTTT .:....:..::....:...:.......::............... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 4411081 NA +3000 chr4 + 190214555 27065307 27065306 27065355 49 AACTCTGTCTCAAAACAAAAAACAAAAAACAAACAAACAAAACTCCAAA chr4 + 94230402 38455916 38455915 38455964 38455916 38455915 38455964 49 AAATTTGTTTAAGAAAAAAAAACAAAAAACAAACAAAAAAAACCCCTAA ..x.:...:.x.:..x.....................x.....:..x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -11390609 -82839793 +3737 chr4 + 190214555 27076586 27076585 27076656 71 GTGCACCTGTAATCCCAGCTACTCAGAAGGCTGGGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x....:.:.........:::.......:.x.xx.x...x.............:..x.xx:..:.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -48956618 -45273784 +3003 chr4 + 190214555 27077077 27077076 27077129 53 ACATATATATATATATATATACACACACACACATATGTCAGGAAACATTAAAA chr4 + 94230402 85078510 85078509 85078562 85078510 85078509 85078562 53 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTGAAA .:.....:.x....x......:...........:.::::.::..:....:... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -58001433 -36228969 +3095 chr4 + 190214555 27077079 27077078 27077125 47 ATATATATATATATATATACACACACACACATATGTCAGGAAACATT chr4 + 94230402 41650596 41650595 41650642 41650596 41650595 41650642 47 ACATATATATATATATATACACACACACACGTATCTTATGAGTTATT .:............................:...x.:.x..:x:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -14573517 -79656885 +3015 chr4 + 190214555 27108225 27108224 27108277 53 ATATATATATATATATATATATATATATATATACATACAGAGAGAGAGAGAGA chr4 + 94230402 10342911 10342910 10342963 10342911 10342910 10342963 53 ATATATATGTATAAAAGCTTATATATACATACATACACAGAGAAAGGGAAAGA ........:....x.x::x........:...:.:.:.......:..:..:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 16765314 NA +3185 chr4 + 190214555 27126760 27126759 27126833 74 ACTTCTTTTTCTTCTTTTTCTTCTTCTTTTTTTTTTTTTTGAGATGGAATTTTGCTCTTGTTGCCCAGGCTGGA chr4 + 94230402 27011079 27011078 27011152 27011079 27011078 27011152 74 ACTTCCTTTTCTTCTTTTTCTTTTTTTCTTCTCTTTTAATGATATTCTGTGTTGTTTCACTTGCACAGCCTGAA .....:................:..:.:..:.:....xx...x..xxx:.x...:.::xx....x...x...:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 115681 NA +4158 chr4 + 190214555 27134866 27134865 27134948 83 CATGGTGGTGCATGCCTGTAGTCCCAGCTACTTGAGAGATTGAGACATGAGAATCACTTGAACCCAGGAAGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--......:............:..::....x.x..x...x.............:.:x.xx:..:..::. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -48898331 -45332071 +3108 chr4 + 190214555 27180957 27180956 27181059 103 GAGAATAGGTTCCATGCTGAGGTTAGGGGTGGCATGGAGAAGGGGAATGGTGCCTTAGAGAAAGGGCAGATATTTTTATTTTTATTTTTTTGAGACAAAGTTT chr4 + 94230402 34662476 34662475 34662560 34662476 34662475 34662560 85 GGAAATATAAACCATACTGGGGAGAGGGG-------GAGAAAAAAA-----------GAGCAAGGATAGTTGTTTTTATTTTTATTTTTTTGATGCAAAGATT .::....x:xx....:...:..xx.....-------.....::::.-----------...x....::..x.:.....................x:.....x.. 29M7D10M11D46M 63/85 74.1% 85/94230402 0.0% 18/85 21.2% -7481519 -86748883 +3148 chr4 + 190214555 27187412 27187411 27187453 42 GAAAGCTCTGCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 39858773 39858772 39858814 39858773 39858772 39858814 42 GAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAA ..........:.................x..x....x..... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -12671361 -81559041 +3046 chr4 + 190214555 27187428 27187427 27187479 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATAGTGACTACCAAAG chr4 + 94230402 72824140 72824139 72824191 72824140 72824139 72824191 52 AAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAG ....:..:.......:.....:....:x..:....x.:.....x..::.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -45636712 -48593690 +3637 chr4 + 190214555 27194578 27194577 27194810 233 GAGCCTTTGTCTCCTTCCTTCCCTTCCTTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTGCTTCCTTCCTTCCTTCCCTGCTTCCTTTCTTCTTCTTTCCTTCTTTCAATTCTCCTTCCACAAACAGTCATTAAATACCTACCCTCTGTCAAACCTGTTCTAGGCTCTGGTATGTTTGAAGAA chr4 + 94230402 50176264 50176263 50176487 50176264 50176263 50176487 224 GATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTA--TCCGCCCACTTTTGCATTGTTCTTTCTG------TTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTTACACAGACATTACAGCTCTAGTCTTTGTGTGTCCCACT-TAGCTACAGGTCTGTTTCAGAAA ..x::.:......x:.x..::....:.......:x--...x...x.::.:x.x::x.:.:.:.:x------...::.x:x.:.x.::..x::.:...:...:....xxx:.::x.:...::x:..:.:..::.....::..::.:.:....:.x...xx:x.x:x.:..x:.x....x.....x.xx:...x:..:...xx:x..:::.-...x:x.x...x.....x.::.. 35M2D28M6D138M1D23M 124/224 55.4% 224/94230402 0.0% 9/224 4.0% -22981686 -71248716 +3046 chr4 + 190214555 27194624 27194623 27194714 91 CCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTGCTTCCTTCCTTCCTTCCCTGCTTCCTT chr4 + 94230402 2247941 2247940 2248031 2247941 2247940 2248031 91 CCTGCCCCTTCTCCTCCTTCCCTCAGTGTGTCAGTCCCACGTCCTTTACTTGCTTCCCTCTCTGCTTCTTTCCAAGCATGCTGGCCTCCCT ...x..:.::::.....:......xx.x:x..xx...:x.x.:.:..x...x.....:..:.......:....xxx.x.x.:x..:...:. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 24946683 NA +3010 chr4 + 190214555 27197240 27197239 27197294 55 AAGGGGGCAAAGAATATGAACAGACACTTCTCAAAAAAAAAAAAAAAAAAGACAT chr4 + 94230402 63270444 63270443 63270498 63270444 63270443 63270498 55 AACAGGGCAAACAATAGGACTAGACAATTTTCAAATGAAAAAAAAAAAAATGCAT ..x:.......x....x..x:.....x..:.....x:.............x:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -36073204 -58157198 +3739 chr4 + 190214555 27205424 27205423 27205494 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGATGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x..........:..:..x.xx:..:..:.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -48827783 -45402619 +3628 chr4 + 190214555 27214433 27214432 27214523 91 TTTATTCTACAGATGTGGAAACTGAGGCCTAAGGATTTAAAAAAATCATCAAAGATCACACAAAAGATT-GTCAAAGGTCAAATACAACTTA chr4 + 94230402 58828016 58828015 58828107 58828016 58828015 58828107 92 TTTATTATACAGATGTGGAAACTGAGGTATGTAGATTAAAAAAAATTGCTCAAGATCAACCAGTAGGCCAGTGGAAGGATGAACAAAGTTTA ......x....................:x.:x:....x........::::x.......xx..:x..:::-..x:....x::..:.x.::... 69M1I22M 63/91 69.2% 92/94230402 0.0% 1/91 1.1% -31613583 -62616819 +3326 chr4 + 190214555 27227117 27227116 27227176 60 TGCACCTGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x......:.........:.::..:.....x.xx.x...x.:........::.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -48806088 -45424314 +3553 chr4 + 190214555 27246810 27246809 27246876 67 TGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::.:......x.xx:x...x.............:..x.xx:..:..:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -48786401 -45444001 +3448 chr4 + 190214555 27288054 27288053 27288113 60 TGCACCTGTAATCCCAGCTACTCGGAAGGCTGAAGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:.........:.:........:x.xx.x...x.:.........:.:.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -48745151 -45485251 +3829 chr4 + 190214555 27342499 27342498 27342581 83 CGTGGTGGTGCATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--...:..:...........::........x.x..x...x::.........x.:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -48690698 -45539704 +3595 chr4 + 190214555 27365436 27365435 27365503 68 CAACAGAGGGAGACTCTGTCTGAAAAAACAAACAAGCAAACAACAACAACAACAACAAAACAAAAAAA chr4 + 94230402 78095307 78095306 78095374 78095307 78095306 78095374 68 CAACAGATAGATATTGTGAATGGTAAAACAAACAAACAAACAACAACAACAACAAAGCCACGAGAAAA .......x:..x.:.x..xx..:x...........:...................x:xx..:.:.... 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% -50729871 -43500531 +3094 chr4 + 190214555 27365448 27365447 27365490 43 ACTCTGTCTGAAAAAACAAACAAGCAAACAACAACAACAACAA chr4 + 94230402 29430291 29430290 29430333 29430291 29430290 29430333 43 ACTATGTTTCAGGAAACAAACAAACAAACAACAACAACAACAA ...x...:.x.::..........:................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -2064843 -92165559 +3204 chr4 + 190214555 27365451 27365450 27365540 90 CTGTCTGAAAAAACAAACAAGCAAACAACAACAACAACAACAAAACAAAAAAACCCCACAGAGGCATGGATGCTGTTGCATAAATCCACA chr4 + 94230402 76741956 76741955 76742036 76741956 76741955 76742036 81 CTTTCTTACCAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACAAACAGA---------ACTGCTGCTTGAATTAGCA ..x...x.xx..........:....x..:................x..:xx..x.xx.....---------:...:...x.:...:x:.. 62M9D19M 60/81 74.1% 81/94230402 0.0% 9/81 11.1% -49376505 -44853897 +3321 chr4 + 190214555 27402954 27402953 27403032 79 ATGTGTGTGTGTATATATATACACACATATATATACACACACACATATATATATACACATATATATACACACAATTATA chr4 + 94230402 58675391 58675390 58675464 58675391 58675390 58675464 74 ATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCC-----TATACTTAAAATTGTA ..x.x...:..:............x.....:.::........x..x......x..xx.-----.....x:.x....:.. 58M5D16M 57/74 77.0% 74/94230402 0.0% 5/74 6.8% -31272437 -62957965 +3330 chr4 + 190214555 27444155 27444154 27444227 73 TGCACCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAAGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:........x:.::........x.xx.x...x::..........::..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -48589050 -45641352 +3028 chr4 + 190214555 27451170 27451169 27451219 50 TTTTTGATTGTTTCTTTCTCTTTTCCTTCTTTTTTTCTCTATCTCCTCCT chr4 + 94230402 49829854 49829853 49829903 49829854 49829853 49829903 50 TTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCT ......x:::.........:....:.......::......x:.:..:... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -22378684 -71851718 +3311 chr4 + 190214555 27454617 27454616 27454805 189 CTGCTGTTGTTTGTTTGTTTTTGTTTGTTTTGTTGGCTTTACCTGGGGTGCTTGGAATTT-----AGGCTATGCATGCGTGGTTCACAATTAGCCAGAGATTTGAAAAGAATTTGTTCACAGGTTCTGAGCTTCCCGACTGTTTTCTAGGATTTTCTTTTTTTTTTTTTTCATTTCATTTTCTTTTTTTTTCTT chr4 + 94230402 6251021 6251020 6251182 6251021 6251020 6251182 162 CTGTTTTTGTTTGTTTGTTTTTGTTGGTTTTGTTGGTTT---------TTTTTCCAATTTAAAAGAGGCTTTTGCTCTGTATGTCACTATTTA-----------------------TCACAGAATTTGAATTAACTGAAGCTTTTTTTGCACCATCATTTTTTATTATACCATTATATGTAATTTTGGTTTCTT ...:.x...................x..........:..---------.x:..xx.....-----.....x.xxx.x:..:xx....x...x:-----------------------......:x.:...::.xx.:..xxx....:.x.x.::x..x......x..x.x:....x:..x.xx....xx...... 39M9D12M5I28M23D78M 108/157 68.8% 162/94230402 0.0% 37/157 23.6% 21203596 NA +3138 chr4 + 190214555 27454740 27454739 27454819 80 AGCTTCCCGACTGTTTTCTAGGATTTTCTTTTTTTTTTTTTTCATTTCATTTTCTTTTTTTTTCTTTTTTTAAGTTTTAT chr4 + 94230402 21380764 21380763 21380843 21380764 21380763 21380843 80 AGCTTACTGATATTTTTTAAGCATTATGTTTTCTGTTTTTTTTTATTTGTTTGCTTTTGTTTTTTTCCTCTAGTTTTTAT .....x.:..:xx....:x..x...x.x....:.x.......:xx..::...x.....x....:..::.:..:x...... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 6073976 NA +3217 chr4 + 190214555 27454766 27454765 27454826 61 TCTTTTTTTTTTTTTTCATTTCATTTTCTTTTTTTTTCTTTTTTTAAGTTTTATTATTATT chr4 + 94230402 84733244 84733243 84733303 84733244 84733243 84733303 60 TCTGTTTTCTTTTTGTCATTTCAGTTTCTCTTTTTTTTTTTTTCT-AGTTAAATTCTTACT ...x....:.....x........x.....:.......:.....:.-....xx...x...:. 45M1D15M 49/60 81.7% 60/94230402 0.0% 1/60 1.7% -57278478 -36951924 +3010 chr4 + 190214555 27460912 27460911 27460959 48 GTAAAAAAAAAAAAAAAAAAGAATGAAAAGGAAATAGTCACTAGACCA chr4 + 94230402 57040448 57040447 57040495 57040448 57040447 57040495 48 GCACAACAAAGAAAAAAAAAGAATGAAAATGACATAATCACTGGATCA .:.x..x...:..................x..x...:.....:..:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -29579536 -64650866 +3452 chr4 + 190214555 27466199 27466198 27466348 150 GGTTCATCACTAGGATTTCCATTGTTGCCTTCAAAGAAATAGAAAACACGATTCTTTCTTTAATATGGAGTTTTAGCCACAGATAAACTTAATGTCAAGTGATAGTTGATTGTATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4408997 4408996 4409121 4408997 4408996 4409121 125 GGATCACTGTGAAGGTTTC---TGCTGCCTTGAAGGCAGGAGAGATTATGTTGCTATTTTTGTTGT---------------------CTAAAGCTAAAGAGATTGA-GGCTGTACATATATATATATATACACACACAGAGACACACACA ..x...::::x.:.:....---..:......x..:.x.:x...:.x:.:.x.x..x.:...:x.:.---------------------..x..xx.x...x...x.x-.::....:.......................x.x......... 19M3D44M21D19M1D43M 88/125 70.4% 125/94230402 0.0% 25/125 20.0% 23057202 NA +3002 chr4 + 190214555 27466302 27466301 27466340 39 AGTTGATTGTATATATATATATATATACACACACACACA chr4 + 94230402 74671069 74671068 74671107 74671069 74671068 74671107 39 AATTAGCTGTATATATATATATATACACACACACACACA .:..:::..................:............. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -47204767 -47025635 +3231 chr4 + 190214555 27472117 27472116 27472205 89 ACACACACACAGCAAAACAAAAAGCAAACAAAAAAGCCAATATTGCATCCCAGCAGTAATGATGGATACT-------AATACCAACCT-TTCCTAAA chr4 + 94230402 14222064 14222063 14222160 14222064 14222063 14222160 97 ACACACACAAAAAAAACCAAAAAACAAACAAAAAAGGGGATGTGGTCTCCAAACAATACAGATGTTCACTCAGGAGCAGTACACACCTCTTCCTAAA .........x.:x...x......:............xx:..:.x.:x...x.:..:..xx....xx:...-------.:...xx....-........ 70M7I11M1I8M 66/89 74.2% 97/94230402 0.0% 8/89 9.0% 13250053 NA +3181 chr4 + 190214555 27482391 27482390 27482460 70 CGTGGTGGCGCACACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCACTTGAACGTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:....:--......:.........x.::........x.xx.x...x.........x::.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -48550806 -45679596 +3601 chr4 + 190214555 27484591 27484590 27484663 73 TGCCCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -48548614 -45681788 +3781 chr4 + 190214555 27484724 27484723 27484834 111 CTACAAAAACAAACAAACAAAATAAAACAAAAAAAACCACTATATATATATACACACACACACACACACATAAATATATATATGTGTGTGTGTATATATATACACACACGT chr4 + 94230402 22600172 22600171 22600271 22600172 22600171 22600271 100 CTGCAACAGCACAGAAATTCAGGAAGACA-----------CACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT ..:...x.:..x.x...:xx.:x..:...-----------:.:....x:.:.::..x.....::..:...x......:.....x.............::..:...::.x.. 29M11D71M 69/100 69.0% 100/94230402 0.0% 11/100 11.0% 4884552 NA +3190 chr4 + 190214555 27484740 27484739 27484803 64 ACAAAATAAAACAAAAAAAACCACTATATATATATACACACACACACACACACATAAATATATA chr4 + 94230402 74671054 74671053 74671117 74671054 74671053 74671117 64 acaAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ....:.xx.x.......xx.x.xx............:.:...............x...x.x... 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% -47186314 -47044088 +3014 chr4 + 190214555 27484764 27484763 27484826 63 TATATATATATACACACACACACACACACATAAATATATATATGTGTGTGTGTATATATATAC chr4 + 94230402 89823932 89823931 89823994 89823932 89823931 89823994 63 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGC .......:x....................x..x.xx.......::..:.x:xx.xx.....:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -62339168 -31891234 +3124 chr4 + 190214555 27484764 27484763 27484810 47 TATATATATATACACACACACACACACACATAAATATATATATGTGT chr4 + 94230402 89823934 89823933 89823980 89823934 89823933 89823980 47 TATATGGATACACACACACACACACACTTATAACTATATATACGTAT .....:x...:................x:....x........:..:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -62339170 -31891232 +3121 chr4 + 190214555 27484781 27484780 27484843 63 ACACACACACACATAAATATATATATGTGTGTGTGTATATATATACACACACGTACACATATA chr4 + 94230402 41749097 41749096 41749159 41749097 41749096 41749159 63 ATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATA .:.:.x.........x.x:.x.....xx..:....::...:......:...:....:.x.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -14264316 -79966086 +3399 chr4 + 190214555 27500990 27500989 27501058 69 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::......x::.--....:.:...........::........x:xx.x...x.............:. 14M2D53M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -48532207 -45698195 +3434 chr4 + 190214555 27527178 27527177 27527250 73 TGCACCTGTAATCCCAGCTACTTGGGAGACTGAGGCATAAGAATTGATTGAACCCAGTAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::..:.....x.x.:x...x::x..........x..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -48506027 -45724375 +3249 chr4 + 190214555 27541695 27541694 27541743 49 GTTTGGATGCCAGGCGGAGAAAAAACAAAAAACAAACAAAAAAAACCCA chr4 + 94230402 22790702 22790701 22790749 22790702 22790701 22790749 48 GTCCAGATGC-AGGCAGCAAAAAAACAAAAAACAAACAAAAAAAACCCA ..:::.....-....:.x:.............................. 10M1D38M 42/48 87.5% 48/94230402 0.0% 1/48 2.1% 4750993 NA +3004 chr4 + 190214555 27554933 27554932 27555184 252 GCTTTCTATCTTCTTAAATTTTTGTTA--------TTTATTGATTTGGAAGTTTTG--CATTCTATTTCTTTTCTCTCTTTCCCTTCCTTCCCT----CTCTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTTCTTCTTTCTCTTTCTGTTTTTTTTTTTT chr4 + 94230402 19215304 19215303 19215564 19215304 19215303 19215564 261 GTTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCA---CTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTT--CTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCT .:.:...::....:.xxx.x..x..x.--------......xx:...xx.:..x..--:....:.---....:x...:..xx.x.x:::.....----.:.x:xx::..::...::.::..::::...:.....:..xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:::.::.x..x.....:xxxx...--:::..xx...:.....x.:..x.x...:.x.x.::.:.x.:. 27M8I21M2I7M3D26M4I124M2D42M 141/247 57.1% 261/94230402 0.0% 19/247 7.7% 8339629 NA +4269 chr4 + 190214555 27554934 27554933 27555190 257 CTTTCTATCTTCT--TAAATTTTTGTTAT------TTATTGATTTGGAAGTTTTGCATTCTATTTCTTTTCTCTCTTTCCCTTCCTTCCCTCTCTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTTCTTCTTTCTCTTTCTGTTTTTTTTTTTTGAGACA chr4 + 94230402 19215313 19215312 19215572 19215313 19215312 19215572 260 CTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAA-TATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTT--TTCTGCCTTA--TATTTTTCTATCCTCTGTCTCTGAAACA ...:..x...x:.--.........:..x.------..:..:...xx...-.x..x..:.:.xx.::...xx:x.x..::..:.xx:x...x.xx:::.::...:..:::.::.:...:...:....xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.::.x..x.....:xxxx....::..xx.....--....x:...x--.x.:.....:.::.:.x.:.:...:... 13M2I14M6I14M1D173M2D10M2D28M 150/252 59.5% 260/94230402 0.0% 13/252 5.2% 8339621 NA +4223 chr4 + 190214555 27554935 27554934 27555167 233 TTTCTATCTTCTTAAATTTTTGTTATTTATTGATTTGGAAGTTTTGCATTCTATTTCTTTTCTCTCTTTC-CCTTCCTTCCCTCTCTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT-----CCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTTCTTCTTTCTCT chr4 + 94230402 19215332 19215331 19215566 19215332 19215331 19215566 235 TTTTTATTTTATT---TTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCG-TATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...:...:..x..---..:......x....x:..x.xxx.x...:::x..:..x:x-.x.....:..xx.-..:x.xx:...:.:..::.::..::.:...:..::...:xx.::.xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x.....-----.:.::...xx:.::..:..x:..:x.x..:....x..:...x..... 13M3D40M1D13M1I116M5I47M 136/229 59.4% 235/94230402 0.0% 10/229 4.4% 8339603 NA +3682 chr4 + 190214555 27555019 27555018 27555147 129 CTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT-TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT---CTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.....::.:..-.:.xx.x:.....:...:....:.:x..::.:.x....xx....--.x....xxx:::..x....:.:x.xx.......---..:..:..:..:...:........:.x... 16M1D44M2D33M3D30M 83/123 67.5% 123/94230402 0.0% 6/123 4.9% -36142098 -58088304 +3190 chr4 + 190214555 27555041 27555040 27555162 122 TTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTTCTTCTT chr4 + 94230402 63697118 63697117 63697235 63697118 63697117 63697235 118 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCC----------CTCTTTTCTTTCTTCCTTTTT ..:x...:.:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:------..x....:.:x.xx..:...::...:----------.......::.....:...:.. 65M6I26M10D21M 73/112 65.2% 118/94230402 0.0% 16/112 14.3% -36142077 -58088325 +3120 chr4 + 190214555 27555048 27555047 27555156 109 TTTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTT chr4 + 94230402 61593571 61593570 61593682 61593571 61593570 61593682 112 TTTTTCTTTCTTCCCTTCTTCCAAAGTTCCCATCTATTTTTCCTTGTCAGTTTATCCACTGATCCCTTTGTTTCCTTTCCTTC-CCCTTAAAACTCTCCTCATCTTCATCTTT ............:.:.....:.----..:.:x...x.:....:..x.:xx...x.::x:.xx.::....x.......:.:.:.-:....xxxx.::.:...x.:...x..... 22M4I57M1D29M 71/108 65.7% 112/94230402 0.0% 5/108 4.6% -34038523 -60191879 +3120 chr4 + 190214555 27555048 27555047 27555156 109 TTTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTTTTTCTTCTTT chr4 + 94230402 61591608 61591607 61591719 61591608 61591607 61591719 112 TTTTTCTTTCTTCCCTTCTTCCAAAGTTCCCATCTATTTTTCCTTGTCAGTTTATCCACTGATCCCTTTGTTTCCTTTCCTTC-CCCTTAAAACTCTCCTCATCTTCATCTTT ............:.:.....:.----..:.:x...x.:....:..x.:xx...x.::x:.xx.::....x.......:.:.:.-:....xxxx.::.:...x.:...x..... 22M4I57M1D29M 71/108 65.7% 112/94230402 0.0% 5/108 4.6% -34036560 -60193842 +3039 chr4 + 190214555 27556785 27556784 27556830 46 TTTTATTTCTTTTTCTTTCCTTTTTTTTGTTGGGGGGGGGAAGGAG chr4 + 94230402 34825732 34825731 34825777 34825732 34825731 34825777 46 TTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGGGAGGG ....:.x...........::........x...........:::.:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -7268947 -86961455 +3158 chr4 + 190214555 27579578 27579577 27579659 82 ATACCAGTTTTGTTTTACTTTAGTTTTGTTTGTTTGTTTGTTTGTTTAAGTGGTCTCATCTATCTTTTACAGCATTTTCCTG chr4 + 94230402 44968068 44968067 44968147 44968068 44968067 44968147 80 ATGCAAGTTTCCTTTTATTTTATTCCCTTTTTTTTGTTTGTTTGTTTAGTTAGTTTTATTTTCTTATT--AGTATTCCTCTG ..:.x.....:x.....:....x.:::x...x................:x.:..:.:..:.x::.x..--..:...:::... 68M2D12M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% -17388490 -76841912 +3310 chr4 + 190214555 27585324 27585323 27585395 72 CTCCTTCAGCCGAAATGAAGACATGTAAGAGATTGCTTCCACTGACCTGAAGTGCCTGTTGGTGCCCTCACC chr4 + 94230402 1192675 1192674 1192746 1192675 1192674 1192746 72 CTTTTGCAGTGAGAACGAGGAGCTGGAGGAGCTCGCCTCGGCCGACCTGAAGTACCTGCTGGTGCCCGCGCC ..::.x...:x::..:..:..xx..x.:...x.:..:..x:.:..........:....:........x.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 26392649 NA +6249 chr4 + 190214555 27586024 27586023 27586157 134 GCAACAGGAAGATCAAGAAGAAAAGGAGGAAGAGGATGATGAAACAAACACTCTACAGAGCTTGGGAATGGGATGACTGTCAGAACATCCATCCTAGGGGCAATGGCAACCGACAGAACATGGGCTGATCTTCC chr4 + 94230402 1196846 1196845 1196978 1196846 1196845 1196978 133 GCGGAAGGAGCAGCAGGAGAAAATAAAGGAGGAGGATGATGAGG-AAGCTCTTCAAAAAGCTCGGGACTGGGATGACTGGAAAGATACACACCCAAGAGGCTATGGCAACAGGCAGAACATGGGCTGATGCTCC ..::x....:x.x..:..::...x::....:...........::-..:.x..::.x.:....:....x...........xx.::.:.:x..:..x..:...x........x.:................x:... 44M1D89M 95/133 71.4% 133/94230402 0.0% 1/133 0.8% 26389178 NA +20260 chr4 + 190214555 27592748 27592747 27593315 568 TCTAATGACAAGAAAATCCAATTCTTACAGAGAAAGAAAATGAATTGTATGCCGTTCGGTCACACATTTGGAACCTGTTATTTTCAATAATAACATGTTAGAGAAGCATTCATTATCGACTAGAAATAACTTATTTCGACAGTTAGCTGTAGTAGAGTTCATGCTGAGTGCTAAGATGCTGACATCAAACAGAAAGAGAGTAAATACAGTGAGCTCCATTCTAGCAGAAGGCATCCATCAACATGGTTTATTTGCACGGTACTGTATTATTTCTTCTCAATCAGCAAGTTTAAGGTAGTCTTTTTTACAGCAGGAAGTGTTGTCTAGTCATTTCTCTCT-CCGTACTGCTCAACCTTTTGCCA--TTCACAGTAAATCTAAACTATTTTAAGGCCACTTCTCTTTGAACCCACAGGTCTGGTTTAATACTCAAAAGTCACCCTTAGGTTAGAGGATATAAACCCAGTTATTTGAATCTAGGAGAGCTAACCTGCTTTCGTGAAGATCTCAGCTTTAG--AGTCAGATAAATGT--CTTCAGATGCATTTGTGCAGAGTACAGCCAAATGATATGA chr4 + 94230402 75138011 75138010 75138568 75138011 75138010 75138568 558 TCTAACCTTAAAAGAATCCATACTTTTGTGAAAAAGAAAATGAATTGTATACCAT------ACACATTCAAGACCTGCTATTTTCAGTAATAACGAG--ATAGAAGTATTCATTACAGACTAGAAACAACTTATTCTGACAGTTTGCCACAGTAGAGTTCATGTTGCTTGTTGAGACACTAACAACAAACAGAAAGGAATAAAATACCACTGGCTCTTTTCCAGTAGTCAGCACTCATCAA-ATACTATATTTCCAAGA-ACATTATCATTTCTCCTCAATCGGCAAGTTCAAGGTAG-CACCTTAACACAAGACAGAGTCAAACAGACATTTCTCTTGGCAGCACTGCTCA----TTTCCCACCTCTGCAATAAATCTAATCTATTTTAAGAGTACTTCTCCCTCAACTTTCAGGTCAGACTGAATTTTCAGATGTCATCCACGGGTTACCAGAAACATGCAAAGCTACCTGAACTTAT--GAGTTAAACAGCTTTCCTAAAGAAGCAAGCTTCTGTCAACCAGATAAATGTTCTCTCTCATATATTTTTGCACATTATAGCAGAGTGTTATGA .....:xx:..:.:......xx::..xxx..:..................:..:.------.......::::.....:........:.......:x.--.x.....:........:x.........:........::.......x..:::.............:..xx..:.:...::..:...x...........::.xx......x::x:....:x...:..:..xx:...::......-..:x.x.....x..x.:-..xx...:......:.......:.......:.......-.x::..x...xx..:x..x..::xx:..x.........:x-.x.:........----...x...--.:::..:.........x..........:x:.......::.x...::x......x.::.x...x:...:.x....:..x::.....xx:..x.:.x:.xx..:..::....::..x--...:...x.x......x.:....xx:x.....:x.--.::...........--::..xx..::....x....x.x..:...x:.:..x..... 55M6D36M2D142M1D17M1D38M1D40M1I12M4D7M2I115M2D35M2I14M2I40M 389/551 70.6% 558/94230402 0.0% 24/551 4.4% -47545263 -46685139 +3258 chr4 + 190214555 27656575 27656574 27656660 86 CCTGGAGACAGAGT-GAGACTTCGTCTCAAAACAAATAACAAAAACAAAAACA---AAACAAACAAACAAACAAACAAAAAAAAGAAGCA chr4 + 94230402 71776019 71776018 71776108 71776019 71776018 71776108 90 CCTGTGAACACAGTTAAGGATACGTTAAAAAATGGAAAACAACAACAACAACAGAAAAACAACCAACCAAACAAACAACAAAAAAAATCA ....x::...x...-:..:x.x...:xx....:::.x.....x.....x....---......x...x...........x.....:..x.. 14M1I38M3I34M 64/86 74.4% 90/94230402 0.0% 4/86 4.7% -44119444 -50110958 +3089 chr4 + 190214555 27664819 27664818 27664896 78 GAAAAAAATAGAAAAAGAAATCCCAATAAGACAAAAAATAAAAATAACAAAGGAATGAGAAAAAAAAAAGAATCAGTA chr4 + 94230402 25035 25034 25112 25035 25034 25112 78 GAAAAAAATAGGTAAAGAATTATTAAGTAAAGAAGACATAGAATTAGTAAAGGAATTGGAAAAAGAATTGGAAAAGTA ...........:x......x.x::..xx.:.x..:.x...:..x..::........x:......:..xx.:.xx.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 27639784 NA +3148 chr4 + 190214555 27695825 27695824 27695877 53 TATATATATATATATATACACACACACACACATACATACATACCTGGGAACAA chr4 + 94230402 74671076 74671075 74671128 74671076 74671075 74671128 53 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAA .:..............................x.x.x.x...x..:::..x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -46975251 -47255151 +3012 chr4 + 190214555 27696323 27696322 27696375 53 CCTGTATTTCTTTTTTCTTCCTTTTTTCTTTTTTTTTTTTTCTGTTTTTTTTT chr4 + 94230402 28926598 28926597 28926650 28926598 28926597 28926650 53 CCTTTATTTCTTTGTTATGGCTTTTTACTGTGTTTTTTTTTCTTTTTTTTTTT ...x.........x..x.xx......x..x.x...........x......... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% -1230275 -93000127 +3125 chr4 + 190214555 27696329 27696328 27696388 60 TTTCTTTTTTCTTCCTTTTTTCTTTTTTTTTTTTTCTGTTTTTTTT---TTTTTTGAGACAGA chr4 + 94230402 29547419 29547418 29547481 29547419 29547418 29547481 63 TTCCTGATTTCTTCCTCTTTTCTTCATTTTTTTTTCTGTTTCCTTTACCATTTTTAAGAGAAA ..:..xx.........:.......:x...............::...---x.....:...x.:. 46M3I14M 48/60 80.0% 63/94230402 0.0% 3/60 5.0% -1851090 -92379312 +3516 chr4 + 190214555 27729675 27729674 27729761 87 AATGTATATATAAATACATATATAAGTATATAGGTATATATAAGTATATACGTATATATGTATATAGGTATATATATACTTATATAA chr4 + 94230402 41749090 41749089 41749168 41749090 41749089 41749168 79 AATGATTATATAAACACACATATAA--------GTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAA ....xx........:...:......--------..x.....x.....:.:.....:...::...:.x...:::x....:::..:... 25M8D54M 58/79 73.4% 79/94230402 0.0% 8/79 10.1% -14019415 -80210987 +3399 chr4 + 190214555 27729750 27729749 27729819 70 ATACTTATATAAGTATATATACACACTTATATAAGTGTGTGTGTATATATATATATATATATGTGTGTGT chr4 + 94230402 41749091 41749090 41749160 41749091 41749090 41749160 70 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATAT ..:x........::.:.:...:.x::......x...:....:....:....:...:..:..:.:x.:.:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -14019341 -80211061 +3065 chr4 + 190214555 27731292 27731291 27731361 70 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA-----TACATGCATAA chr4 + 94230402 23247722 23247721 23247796 23247722 23247721 23247796 75 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAA ..:.:.:...::.:.:.:..x...:x.:....:........:...........x:x.x.-----......x.... 59M5I11M 51/70 72.9% 75/94230402 0.0% 5/70 7.1% 4483570 NA +3036 chr4 + 190214555 27731307 27731306 27731346 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 23322225 NA +3194 chr4 + 190214555 27743714 27743713 27743761 48 CATGTGTGCATGTACACACATATGTATACATATATACATACATACATA chr4 + 94230402 23247721 23247720 23247768 23247721 23247720 23247768 48 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACA ........:...:........x.:.:x......:....:.......:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 4495993 NA +16349 chr4 + 190214555 27766106 27766105 27766561 456 ACAATGCTTAGGGTGTGGGAGTCATAAGA-AAGTCTAAGGTTGACTTGAAATTTTTGAAACAAAGAGCAGAAATTTTAAAAAACCGCAGAA---ACTTCAACAGA-TGACATTAATGTGGGAGGAAGAGTAAATAATAAAGAA-AATACAGCAAGATACATGAAGACTTAGATCATTTAAATGCTAAAAGATGAAAGCTAGTTCAAAATAGCTCTTAATCAAACAGTGACACATCTCT--GCAAAAAAGGAATATCAAACAATT--GCATATCATTAAGTCTAAGGTAGCAAAAAGTAAA-----AGTATAAAGGTGA--TCTGTGTACATCATTAAATCTGAAAGATCAGTAATAAGATTTT----------TTTAAGCTGTAACATTAAAAGGAAAG-------ACCAAGTATAATTAAGTAGGGCAGAAAGAGTCTAA--AGGATCAATGAACATCAACAATCTCAGTAACAGAAAAAATAAGAAGAAA chr4 + 94230402 75074845 75074844 75075333 75074845 75074844 75075333 489 ACAATACCTAAGGCGTGGGAGTCATGTAATAAGTGTAAATTTGACTTGGAAAATTAAAAACAAAGAGCAGGAAACAAAGGAAAAAGTAGCACTTGTTTGAAGAGAATGGCATTATAGTCAGA--AAGAGTAAATAATGAGGAACAATGCAGTAATATACATGAGGACTTAGATGGTTTAAATGCTAGAAGATGAAAGCTAGTTCAAAGCAGCTAAATAGAGAGCAGTGACAGGTTCCTAGGGAAAAAAAGGATATCAAACAATTGGGTATGTCATTAAATACAAAAAATCAAAAGGTAAAAAGAGAGTCTAAAAGATATTTCTGTGTGCAGTATTAAATATGAATGATAAGTAATAAGATGAGAAAAGAAAAATCTATG-TCTAACATTAAAAACAAAGGAACATTACCAACTATGCCTAAGTAGGGCAAAAAGGAGCCAGGTACGATTTATTAATATCAACAAAAACTAGAAGAAACAGACTAAGAAGCAA .....:.:..:..:...........:x:.-....x...:x........:..xx..x:.............:..x:xx.::...xx.:..x.---::..x..x...-..:.....xx..x:..--.............:.:...-...:...:..x........:.........x:...........:....................::....xxxx.xx:.:........x:.::..--.x......:.:.............--.:..:.......:.x:..::x.x.....:.....-----...x....:.xx.--.......:..x:.......x....x...x...........xxx----------.:..x.-.x...........:x....-------.....x...:x:...........:....::x.:.:--.x...:x..x..:........xxx.x:x..x.:.x.:.x.......x.. 29M1I61M3I11M1I16M2D19M1I94M2I24M2I34M5I13M2I43M10I6M1D19M7I35M2I49M 337/453 74.4% 489/94230402 0.0% 39/453 8.6% -47308739 -46921663 +3157 chr4 + 190214555 27771432 27771431 27771521 90 GCACCTGTAGTCCCAGCTACTTGGGAGGCCGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCAAGATGGCGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:...........::....:...x.xx.x...xx:.x.......:.:..x.xx:.x:..:..------..x...::.... 72M6D12M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% -48261774 -45968628 +3885 chr4 + 190214555 27774151 27774150 27774254 104 CACCACTGCACTCCAGCCTGAGCAATAAGGAAGGACTCCATCTCAAAAAAAAAAAAAAAAGAAAAAAGAAAAAGAAACAAAATATGAAACAATAACTGGAAAAA chr4 + 94230402 55084817 55084816 55084915 55084817 55084816 55084915 99 CAGCAATGTTCTCCA---TGGAAAAAAAAGAAATAC--CATTCAAGAAAGAAAACAACAAAAAAAAAGAGAAAGATGTTAAATATGAAAAAATAACTGCAAAAA ..x..x..:x.....---..::x..x..:...:x..--...::x.:...:....x..x..:........:.....x::x..........x........x..... 15M3D18M2D66M 73/99 73.7% 99/94230402 0.0% 5/99 5.1% -27310666 -66919736 +3294 chr4 + 190214555 27792968 27792967 27793049 82 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAATATATATATATATATATATATATATATACATAT-CATTGCATGTGTA chr4 + 94230402 26230456 26230455 26230538 26230456 26230455 26230538 83 GTGCAAGTCTGTTTCTGTGTGCATATATATATATAGTGCATGAATATATATGCATGTGTGTGTCCACATACAGAGCATGAGTA ...::x..x...x.x......::.:..........:.::..:x........::..:.:.:.:.x..:..-..xx.....x... 69M1I13M 57/82 69.5% 83/94230402 0.0% 1/82 1.2% 1562512 NA +3080 chr4 + 190214555 27792973 27792972 27793037 65 TGTGTGTGTGTGTGTGTGTGTATATATATAATATATATATATATATATATATATATATACATATC chr4 + 94230402 14793726 14793725 14793790 14793726 14793725 14793790 65 TATATGTGAGTATGCGTATGTATATATATCACACATCTGAGTGTATAACTATAGATATAGATATC .:.:....x..:..:..:...........x.:.:..x.:x:.:....xx....x.....x..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 12999247 NA +3236 chr4 + 190214555 27811430 27811429 27811498 69 GTGGTGGCACACACCTGTAGTCCCAGCAACATGGGAGGCTGAGGCAGGAAAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:.....x..x..::........x.xx.x:..x.............:.. 6M5D58M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% -48221771 -46008631 +3054 chr4 + 190214555 27815166 27815165 27815231 66 TCTCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAACCAGAAGGAAGCAAGA chr4 + 94230402 60474941 60474940 60475006 60474941 60474940 60475006 66 TCTCAGGAAAAATAAAAAAAAAAAATCCAAATAGAAAAAAAAAATCATAAAGAGAAGTATGCAAAA .....:.x....x............xxx...x.:..........xx:...xx.....x.x....:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -32659775 -61570627 +3067 chr4 + 190214555 27815173 27815172 27815222 50 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAACCAGAAG chr4 + 94230402 31785863 31785862 31785912 31785863 31785862 31785912 50 CAAGGAGAAAAAAAAAAAGAAAGAAAAAGGAAGATAAAACTAACCAGAAG ...::.:...........:...:.....::..:.x...:x.......... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -3970690 -90259712 +3155 chr4 + 190214555 27832653 27832652 27832729 77 GGCGCATGCCTCTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGGTAGAGATTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...:.--.x..:.:...........::........x.xx.x...x..........::.:..x.xx:.::..:.. 8M2D67M 53/75 70.7% 75/94230402 0.0% 2/75 2.7% -48200550 -46029852 +6594 chr4 + 190214555 27832791 27832790 27832910 120 ATTAAAATATATACAT---GTATATATATATATA--------TATATATATATATATATATATATATATATACACATACATATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 44243179 44243178 44243308 44243179 44243178 44243308 130 ATTACATtatatatataatgtatatatatatataatatataatatatata-atgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT ....x.x......:..---...............--------........-..:.:.:.:.:.:........:.:...:.......:...x.......:.:.:................x.:.:....... 16M3I15M8I8M1D80M 99/119 83.2% 130/94230402 0.0% 12/119 10.1% -16410388 -77820014 +4266 chr4 + 190214555 27832825 27832824 27832951 127 ATATATATATATATATATATATATATACA-CATACATATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATATATATATATACCTTGTAAATATAAGAACAGAAAAATTTAAGG chr4 + 94230402 32744950 32744949 32745071 32744950 32744949 32745071 122 ATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT---TCTGTAGATGCAAC---CAAGGATAAGAGTTCAAAAATTCGTGG ..:..:.:x...x...x....:..x....-x...:.x...:.............x:.:.:.:.......:...:.......---.x.:..x..::.x.---:..:x......::xx.......::x.. 29M1I51M3D14M3D27M 86/121 71.1% 122/94230402 0.0% 7/121 5.8% -4912125 -89318277 +3716 chr4 + 190214555 27832825 27832824 27832945 121 ATATATATATATATATATATATATATACACATACATATATATACATACACACATATATACGTG--TGTGTGTGTGTGTATATATATATATATATATACCTTGTAAATATAAGAAC---AGAAAAAT chr4 + 94230402 89812969 89812968 89813094 89812969 89812968 89813094 126 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTAAGAAAAAT .....x...x....:.:.....x..x.::.x.xx...:..:.:..x..x.x...:::..:..x--...................:.x..x..x.xx.x:..x..x:x.:.:.x.:---........ 63M2I50M3I8M 83/121 68.6% 126/94230402 0.0% 5/121 4.1% -61980144 -32250258 +3184 chr4 + 190214555 27832846 27832845 27832931 86 TATATACACATACATATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATATATATATATACCTTGTAAATAT chr4 + 94230402 28997783 28997782 28997864 28997783 28997782 28997864 82 TGTAGTCACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGT----ATATATATAAATCAATAGCTTGAAAATAT .:..xx..........:x.x..:.:...:....:...xx..xx:.:...:...----.........x..xx...x....x...... 53M4D29M 60/82 73.2% 82/94230402 0.0% 4/82 4.9% -1164937 -93065465 +3005 chr4 + 190214555 27832861 27832860 27832913 53 ATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATATATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ........:....:..:....x.:........x.......:.:.x.:x.x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 20975251 NA +3327 chr4 + 190214555 27889302 27889301 27889373 72 CCTTTTTCTTTCTTCTTTCTTCCTTTCTTTCTTTGTCTTTCTTTCTTTTCTTTCTTCTTTCTTTTTCTTTCT chr4 + 94230402 28615945 28615944 28616016 28615945 28615944 28616016 72 CTTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT .:.:.....:.::.:.....:.:..x...:x:.....x....x.x......x:::...::.......:..:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -726643 -93503759 +3178 chr4 + 190214555 27919334 27919333 27919406 73 TGACTACCTCTTTTTTTTCCAGTGTGGGTTTTGTTGTTGCTATTATGTTCTTTTTCCACCTTTGTGTTCTTAT chr4 + 94230402 63517177 63517176 63517248 63517177 63517176 63517248 72 TGACTGGCTCTGATTTTTTTGGGGGGGGTTTTGCTCCTGCTATTATTTTCTTTTTCTTGCTTC-TGTTGTTAT .....:x....xx.....:::.x.x........:.x:.........x.........:xx...:-....x.... 63M1D9M 54/72 75.0% 72/94230402 0.0% 1/72 1.4% -35597843 -58632559 +3058 chr4 + 190214555 27931975 27931974 27932014 40 CTCGTTTTTTGTTTTTGTTTTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 72610684 72610683 72610723 72610684 72610683 72610723 40 CCTGTTTTTTGTTGTTGGTTTTTGTTTGTTTGTTTGTTTT .::..........x...x...................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -44678709 -49551693 +3042 chr4 + 190214555 27935541 27935540 27935593 53 TTTCTACATTTTCTGGTTTTTTCTTTTGTTTGTTTTATTTTGTTTTTTAGACA chr4 + 94230402 39834464 39834463 39834516 39834464 39834463 39834516 53 TTTTTGTGTTGTTGGGTTTTTTTGTTTGTTTGTTTTGCTTTGCTTTTTAGATA ...:.:::..x.:x........:x............::....:........:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -11898923 -82331479 +3315 chr4 + 190214555 27957476 27957475 27957542 67 AGGTAGGCATA--TCCTAGTACAGCTGTGA---ACACACACACACACACACACAGAAACACACAAATTTCTC chr4 + 94230402 85246737 85246736 85246808 85246737 85246736 85246808 72 AGATAAGCACACTTCTCAAAACAGCAGAGACAAACACACACGCACACACACACAGGAACAGAAAAATTTCTC ..:..:...:.--..::.:x.....x.x..---........:.............:....x.x......... 11M2I17M3I39M 54/67 80.6% 72/94230402 0.0% 5/67 7.5% -57289261 -36941141 +3031 chr4 + 190214555 27964427 27964426 27964509 83 TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTTCAGCATCTG chr4 + 94230402 69163347 69163346 69163429 69163347 69163346 69163429 83 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTTGGCAGCCTTTG ...........x..........::....::::::.:.x..:::x:.:...x..x...::.:.x::.x....:xx....x.:.. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% -41198920 -53031482 +3413 chr4 + 190214555 28038907 28038906 28038984 78 GTGGTGGCACCCATAATCACAGCTACTTGGGAGGCTGAGGCAAGAGAATCACTTGAACCCGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-...x::..:.:x..........::........x.xx.x...x...........:....x:xx:..:..:.. 6M1D71M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% -47994294 -46236108 +3163 chr4 + 190214555 28042417 28042416 28042500 84 AAAATTGGAGACATAATTATTTTGTTTTTATTAATCTATCTTAAATATATGTATACCTTACAGTTATTTCAATGTTTAGTATCA chr4 + 94230402 21890061 21890060 21890144 21890061 21890060 21890144 84 AAAATAGCAGAAGAAAGGATTTTATTGTTATTTATTTATCTCAAATATTTTTATTCCTTTTATTCCTTTAAGTGATTTGTATTA .....x.x...x:x..xx.....:..x.....x..:.....:......x.x...x....x:.x.:x...x.:..x..x....:. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 6152356 NA +3186 chr4 + 190214555 28055764 28055763 28055837 74 GCGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCCCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........::::........x:xx.x...x.x........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -47977440 -46252962 +3125 chr4 + 190214555 28055855 28055854 28055949 95 CTGCACTCCAGCCTGGGTGACAGGGTGAGATTCTATCTCAAAAAAAAAAAAAATATATATATACACACACACACACACACACACACACACACACA chr4 + 94230402 55729460 55729459 55729546 55729460 55729459 55729546 87 CTGCACCACAACGAGAGTCACATAATTGGGT--------GGAAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ......:x..:.xx.:..x...x::.x:.:.--------::............x...x...:.....xx:.x....:....::..x:........ 31M8D56M 60/87 69.0% 87/94230402 0.0% 8/87 9.2% -27673605 -66556797 +3135 chr4 + 190214555 28056875 28056874 28056944 70 TCTGTCTCAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATACATACAT chr4 + 94230402 51472479 51472478 51472548 51472479 51472478 51472548 70 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ..::...:x:x...x.x.x...::......:..x.....:.......x.:.:.......:x....:.:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -23415604 -70814798 +3405 chr4 + 190214555 28056883 28056882 28056937 55 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495001 1495000 1495055 1495001 1495000 1495055 55 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..x.:.........x.:...............:.:..:...:.....x....::. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 26561882 NA +3413 chr4 + 190214555 28056884 28056883 28056939 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....:.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 26561884 NA +3114 chr4 + 190214555 28057105 28057104 28057157 53 ATTTTCTTTTTTCTTTTTTCTTTGTATTTGATTATTTAATTATTTATGTATTT chr4 + 94230402 33646858 33646857 33646910 33646858 33646857 33646910 53 ATTTTTTCTTTTTTTTTTTATTTGTATTTGATTGTTTTAGTATTGCTGTTTTT .....:.:....:......x.............:...x.x....xx...x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -5589753 -88640649 +3427 chr4 + 190214555 28094115 28094114 28094173 59 TATATATAGTGTGTGTATGTGTGTATACATATATACACACATATATACATTTATATATA chr4 + 94230402 6083165 6083164 6083223 6083165 6083164 6083223 59 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTA .......:........:....:.:.....:.x.:.:.:.:.......:x:...:..:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 22010950 NA +3352 chr4 + 190214555 28094292 28094291 28094376 85 AGTATAGTGTGTATGTGTGTATGTAT-GTGTGTATGTATGTATAGTGTATGTATAGTGTGTATGTGTGTATGTATGTGTGTATGTG chr4 + 94230402 59903684 59903683 59903769 59903684 59903683 59903769 86 AGTATTGTGTATCATATCCCATATATAGTGTGTTTGTGAGTATAACATATACGTAATATGTATGCGTGTATATATATGTGTGCGTG .....x....:.xxxxx:x:..:...-......x...:x.....:::...:::..:.:......:......:...:.....::... 26M1I59M 58/85 68.2% 86/94230402 0.0% 1/85 1.2% -31809392 -62421010 +3618 chr4 + 190214555 28094487 28094486 28094551 65 GTGTATGTGTGTATATATATACACACACATATATACATGTATATATATACACACATATATACATG chr4 + 94230402 85834552 85834551 85834616 85834552 85834551 85834616 65 GTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ....:.........xx..:..x:..:......:..x..::..:.x...:........:.:..... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -57740065 -36490337 +3015 chr4 + 190214555 28094488 28094487 28094533 46 TGTATGTGTGTATATATATACACACACATATATACATGTATATATA chr4 + 94230402 64054814 64054813 64054859 64054814 64054813 64054859 46 TGTATGTGTTTACACGCATACACACATTTATATACATGTATATTTA .........x..:.:::.........:x...............x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -35960326 -58270076 +3186 chr4 + 190214555 28094556 28094555 28094611 56 TATATATACACACACACACACACATATATATATCACACATTCATCACATTTATTCT chr4 + 94230402 67195546 67195545 67195601 67195546 67195545 67195601 56 TATATACACACACACACACACATATATATATAATAAATTCTCAGGACGTTTATACT ......:...............:.........x:.x.:x:...xx..:.....x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -39100990 -55129412 +3289 chr4 + 190214555 28107234 28107233 28107360 127 TAATGTAAAGAAGAAAAATAGCA--TAGGATTTGATAAGTCAGTATGAT--------TATAAGAATTCAGAATTAAGTGAAGATTCTGTATCAGTCTCTAGTTTTTTTTTTCTTTTGTTTGTTTGTTTTGTTTGTTT chr4 + 94230402 73233244 73233243 73233379 73233244 73233243 73233379 136 TGATGTCTGAAAGAAAGTAAGCAAATGAGAAAAGGTAAATCA-TGTGACACAAGAAATATTAATACTCAGCACTAACTGAAAATTCTGAAACAGCTTATCCCTTTTTTTTTCTGTGGTGTTTTTTGTTTGCTTGTTT .:....xx::......:xx....--.::..xxx.:...:...-.:...:--------...x.:x.:....x.:...x....:......x.x...::.x.xx:...........x.x..x.x...xx....:...... 23M2I17M1D6M8I80M 86/126 68.3% 136/94230402 0.0% 11/126 8.7% -45126010 -49104392 +3125 chr4 + 190214555 28110650 28110649 28110695 46 TATGTGTATGTGTATGTGTATATATGTGTGTGTATGTGTATATATA chr4 + 94230402 63364618 63364617 63364663 63364618 63364617 63364663 46 TATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTATACATA ......:............x:.:........:..:x......:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -35253968 -58976434 +3041 chr4 + 190214555 28110673 28110672 28110744 72 ATGTGTGTGTATGTGTATATATATATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAC chr4 + 94230402 27325491 27325490 27325562 27325491 27325490 27325562 72 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAAC ...:..:..xx...:..:.:x.:x.:x::x:.:...........:.........::...:......:x.x.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 785182 NA +3009 chr4 + 190214555 28110674 28110673 28110734 61 TGTGTGTGTATGTGTATATATATATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x......::..:...:.:...:....:.....:.x:x::...::......:..... 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -27583774 -66646628 +3198 chr4 + 190214555 28110678 28110677 28110742 65 TGTGTATGTGTATATATATATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:.....xx.:....:.:x..x::x.:x:.:...........:..........::..:...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 785186 NA +3136 chr4 + 190214555 28130743 28130742 28130809 67 AGTGGCATGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGAATAATTGCTTGAACCCAGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....--..::.x......:...........::........x.xx:xx..x::...........:.. 5M2D60M 49/65 75.4% 65/94230402 0.0% 2/65 3.1% -47902457 -46327945 +3087 chr4 + 190214555 28143383 28143382 28143452 70 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -47889814 -46340588 +3148 chr4 + 190214555 28188156 28188155 28188200 45 TCCAATACATATATATTTACATATATTCATTCACATATATATGTA chr4 + 94230402 81427559 81427558 81427603 81427559 81427558 81427603 45 TTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTA .:......:......:...x..........x.......x...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -53239403 -40990999 +15413 chr4 + 190214555 28192472 28192471 28192991 520 TACAATGTTATATGATATTACGCTGTGTTACATTTATGATGTTGTATTATGTCAGGTTTGTTTGGTTTTCTGAAATATAA---AATGTGATGGAAAAAATGTTAGATATTCATATTCTGGTTTTATTGTGCTAGATGTACCGCCTGTCTATAAGTT-CCAGGTGGTTCTTCAAACTAA--CTTAACTACTTAAAAATTT-CAAATATGACAAATAGCTCTTTGAAGTTGACTTTTGTGTGTGCTTCAGAGAAACACAAGATGGAACATAAATAAAAACAACTCACAGAAACAAGGTTTAAGATCTGACATTTCTAAGCAGCAGGTTTCTCTTGTCCTCAGGGAGATAAACAAAACTATTGAAAACCCCATTAGGTATA-TTTATAGGCCAGGTTTAATGTCCAAGATGTAAACTAAGATGCCAGACTGCCAGCCACCAACTTTGGGACAGAAGAAAACAGCTTCTTAGAAGGAATGTTTTCATCCTTTTCTTATCTATATTCCAAAGACATGACACC-TTAATCTTTTA chr4 + 94230402 74939800 74939799 74940298 74939800 74939799 74940298 499 TGCAATATTATGTAAAATC-----------------TGATGATTTATATTGACAGACATCTCGTGTATTCCAGAAGGTGAGGAAAAATAATTAAAAATCTGTTAGATGTGCATAGTCTGAGTATAATGTCCAGGAGGTA--AGCTATATATGTTTTTCCATATAATTCTACAAACCAAAGCTTAAATATGAAAAAAATTACAAATAGTACAAATAGCTCTTTGAAGATTACTTATGTATATGCCTCAGAAAAACATAGAATGGAAGATAAATAAAAATAACTCACTGCAACATAGTATAAAATCTGACACTTCAAAACAGCAGG-TTCTTTTATCCCCAGGGAGATAAACAGAACTGTTGAAAACTACATTAGGGATATTTTATGGTATAGGATTAACAACTAGGA--------AGGAAGTTAGGCTGTCTGCCACCAACTGCTGAAT-TAGGTAAGCAACTTCTTACAGTAAGAAAACTCATGCTTGT-TTGGCAACACTTCAGGGATGTTCTTCCATCAATATTTTA .:....:....:.:.x..:-----------------.....x.x...xx..x...::x.x.:xx..x...:::..x:.:.---..x:.:..x:....xx........:.x....x....:x.x..x...x.x:..x...--:x..:.x...:xx..-...x:.::....x.....:..--.....x..:xx.....x..-......xx..................x.x....x...:.:...:.....:.....:.::......x...........:.......x.x....x:..x...:........:...x..:.......-....:..:...:..............:....:........:x.......x...-.....:.xx:...x....::x.:.:..--------.:..x.::..:...:.x..........x:x.:.:-x.:.x..:..:.......x.:x:.:x:xx:....x...x.-..:x.x.:.:.:..::..::.xx:x..-.:...x..... 19M17D44M3I56M2D15M1I21M2I19M1I124M1D53M1I27M8D34M1D40M1D27M1I11M 343/490 70.0% 499/94230402 0.0% 39/490 8.0% -46747328 -47483074 +3028 chr4 + 190214555 28209927 28209926 28209984 58 TCTTCTTCTTTTTCTTCTTCCCCCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCC chr4 + 94230402 42124426 42124425 42124483 42124426 42124425 42124483 58 TCTCTTTCTTTCTTTTTTTTCTCCCCGATGGCTTTTCTCCCTCCTCCCATTTCTCCCC ...::......:.:..:..:.:..:.x.:xx...:..:..........x:.:...... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -13914499 -80315903 +3359 chr4 + 190214555 28209928 28209927 28209989 62 CTTCTTCTTTTTCTTCTTCCCCCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCCTTCCT chr4 + 94230402 7218317 7218316 7218377 7218317 7218316 7218377 61 CTTTTTTTTTTTCTTTTATCCTTTCC-CCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT ...:..:........:.x:..::...-.....:.:..............:x:..:.:.:... 26M1D35M 46/61 75.4% 61/94230402 0.0% 1/61 1.6% 20991611 NA +3724 chr4 + 190214555 28209930 28209929 28210029 100 TCTTCTTTTTCTTCTTCCCCCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCCTTCCTCCCCTTCCTCCCCCTCTTCCCCCTCTTCCTCCTCCTTCCC chr4 + 94230402 93138984 93138983 93139083 93138984 93138983 93139083 100 TCTGCGCATTTTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC ...x.x:x..:.....x..x:.:.x.:x...:......x........::x.::..xxx..x::::...:x.....xxx...:...:..........:... 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% -64929054 -29301348 +3301 chr4 + 190214555 28209949 28209948 28210025 77 CCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCCTTCCTCCCCTTCCTC-------CCCCTCTTCCCCCTCTTCCTCCTCCT chr4 + 94230402 11126208 11126207 11126291 11126208 11126207 11126291 84 CCTCCTACTCTTCTCCCCTTCGTCCCCATCCTCCTCCGGCTGCCCCTGCTCTGCAGTGCTCCCCTTGCCCCCTGCCTTCCTCCT .....xx.:.........:..x.....x......:.:xx..x...:.x...-------.:..:...x....::x:.:....... 51M7I26M 56/77 72.7% 84/94230402 0.0% 7/77 9.1% 17083741 NA +3013 chr4 + 190214555 28209971 28209970 28210048 78 TCCCCCTCCTCCCCTTCCTCCCCTTCCTCCCCCTCTTCCCCCTCTTCCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCC chr4 + 94230402 53757784 53757783 53757861 53757784 53757783 53757861 78 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCC .:.:.:...x:.::..:.x..:...xxx:....:.::.....:.:....::.::....::.:..:..::.::.:.... 78M 46/78 59.0% 78/94230402 0.0% 0/78 0.0% -25547813 -68682589 +3143 chr4 + 190214555 28241055 28241054 28241107 53 CAGAGAAGAAAGGAAGGAAAGGACAGGAAGAAGGATGTTTGAGGGAGGGAGAG chr4 + 94230402 52895311 52895310 52895363 52895311 52895310 52895363 53 CAGGGGATAAAGGAAGGCAAAGAAAGGCAGAAGGATGATTGAAGGAGGAACAG ...:.:.x.........x..:..x...x.........x....:.....:.x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -24654256 -69576146 +3004 chr4 + 190214555 28255346 28255345 28255408 63 ACAACATTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTCTGACACAGAATTT chr4 + 94230402 90546534 90546533 90546596 90546534 90546533 90546596 63 ACATTTTCTGTTAAAAACAAAACAAAAGAAAAGAAAAAAAAATGAGTTTTTACTTCAGCACTT ...x:x.:.........x....x....:....:.........x..:...:.:x:x...x.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -62291188 -31939214 +3001 chr4 + 190214555 28256571 28256570 28256628 58 CCTCCTCCTCCCTCCTCCTCCTCCCTCCTCCTCCTCCTCCTCCCTCCTCCTCCTCCCT chr4 + 94230402 49451727 49451726 49451784 49451727 49451726 49451784 58 CTTCCCTGTCCTTTCGTCTCCTCTCTCATGCCCCTCTTCCTTCCTACTTCTTCTCCCT .:...::x...:.:.x:......:...x.x.:....:....:...x..:..:...... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -21195156 -73035246 +3692 chr4 + 190214555 28312720 28312719 28312822 103 CCTGCACATGTGTGTGTGTGCTCGTGTGTGTGTGTGCACCTGCACATGTGTGTGTGTGCTCGTGTGTGTGTGCACCTGCGCCTGTGTGTGTGTATATGTATAT chr4 + 94230402 21109192 21109191 21109292 21109192 21109191 21109292 101 CTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACT--CACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATAT .:.::..........x.x..:xx.:..:.x.:.:..:..:--.....:.::x:....:.:::.::..:...:.x.x...x:......:.:...:....x.... 40M2D61M 65/101 64.4% 101/94230402 0.0% 2/101 2.0% 7203528 NA +3781 chr4 + 190214555 28334205 28334204 28334357 153 AGTTAACTTTAAATTA-----------CTGTCTAAGGAAATGTACT-----GTGGTCCTGACAGGAGAACTAGCAGTAGTGTGTGCCCTGCATATTTGTAACCGACAATGCCTATGGCTTCATTTAGGTTTGATTCATCAGTCATGTCATCTTCTGAAAGCACTAGAAA chr4 + 94230402 76778942 76778941 76779110 76778942 76778941 76779110 169 AGTTAAACCTTAATTATGGGCTGTAAGCTGCTGAAGGGAGAATACTAGAATGCAGCAATGACATCTGGACTAGTACTAGTGCACGTAATGCATATCTGTCACTGACAGCTCACTGGGTTACATTTAATTCACAATCATCAGTCATGTCTTCTTTCCTATGCAAaaaaaa ......x::.x.....-----------...::x....:.:x:....-----.::.:xx.....xxx.:.....:.x.....:::.:xx.......:...x..:....::x.x:xx..:.x......:x.:xx.x..............x....::xx.x...xx.:... 16M11I19M5I118M 98/153 64.1% 169/94230402 0.0% 16/153 10.5% -48444737 -45785665 +3047 chr4 + 190214555 28365751 28365750 28365800 50 AACATACAAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT chr4 + 94230402 50032647 50032646 50032696 50032647 50032646 50032696 50 AACATATAAATAATGTGTGCGTGTGTCTGTATGTTAGTATGTGTACATAT ......:.....:......:......x...:...xx..:.....:::... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -21666896 -72563506 +3831 chr4 + 190214555 28389112 28389111 28389190 79 GTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--....:.:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -47644089 -46586313 +3251 chr4 + 190214555 28389241 28389240 28389319 79 CCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATAGCCTGTTGAAAT--GTTGAGGGAAGAAA chr4 + 94230402 23965212 23965211 23965292 23965212 23965211 23965292 81 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTAAAGTCCACTGAAGTAAGTAAAAGGAATAAA .:..x...:.::............:.xx.x.x.........x......x..x..:.:::....:.--..x:.:....x... 65M2I14M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 4424029 NA +3246 chr4 + 190214555 28397483 28397482 28397586 104 TTCAGAAGTTTTACTATGATATGCATACATGAGGTTTTTTTTT----TCTGTGTTTTTCATTGTGT----TTGTGTGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTT chr4 + 94230402 10122798 10122797 10122904 10122798 10122797 10122904 107 TTCAAAGAATCTAATATCATAAACAT---CAAAGTTTGATTTTAATGTCTGGGGATT--ACTGTGCACACTGGCCTATTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTCTT ....:.::x.:..x...x...x:...---::.:....xx....----....x.xx..--.:....:----.x.:x.:................................:.. 26M3D14M4I10M2D7M4I42M 75/99 75.8% 107/94230402 0.0% 13/99 13.1% 18274685 NA +3328 chr4 + 190214555 28397536 28397535 28397600 65 TCATTGTGTTTGTGTGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTGTTTTTTTGAGATA chr4 + 94230402 89931288 89931287 89931349 89931288 89931287 89931349 62 TCATTGTG---GGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTGTATTCCTGTGTTTTTGAGGCA ........---.x..x........................xx.x.x..::...x........::. 8M3D54M 51/62 82.3% 62/94230402 0.0% 3/62 4.8% -61533752 -32696650 +3854 chr4 + 190214555 28424046 28424045 28424118 73 TGCACCTGTAGTACCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......x...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% -47609159 -46621243 +3459 chr4 + 190214555 28430874 28430873 28430950 77 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618342 4618341 4618419 4618342 4618341 4618419 78 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .:.:...:...:x:x.::.x.......::............x.::x...::......x.x......-....x...... 66M1I11M 56/77 72.7% 78/94230402 0.0% 1/77 1.3% 23812532 NA +3368 chr4 + 190214555 28430874 28430873 28430945 72 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATA chr4 + 94230402 4618346 4618345 4618418 4618346 4618345 4618418 73 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ...:...:x:x.::.x.......::..............x:x...::......x.x......-....x..... 62M1I10M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% 23812528 NA +3689 chr4 + 190214555 28430874 28430873 28430952 79 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATATATATATAT chr4 + 94230402 4618348 4618347 4618426 4618348 4618347 4618426 79 TTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT .:...:x:x.::.x.......::..............x:....::......x.x......-....x......-....... 60M1I11M1D7M 61/78 78.2% 79/94230402 0.0% 2/78 2.6% 23812526 NA +3729 chr4 + 190214555 28430874 28430873 28430954 81 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATATATA-TATATAT chr4 + 94230402 4618344 4618343 4618426 4618344 4618343 4618426 83 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT .:...:...:x:x.::.x.......::..............::x...::......x.x......-....x.....-....... 64M1I10M1I7M 62/81 76.5% 83/94230402 0.0% 2/81 2.5% 23812530 NA +3013 chr4 + 190214555 28430890 28430889 28430950 61 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA----------TATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.:.......:.:....:.:.:.----------..x...:..x..... 46M10I15M 49/61 80.3% 71/94230402 0.0% 10/61 16.4% -32400640 -61829762 +3435 chr4 + 190214555 28430892 28430891 28430970 79 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA----------TATATATATATATA-----TATCCGCATATGAATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............:.:.......:.:....:.:.:.----------..x...:..x....-----.:.x.....:..x:..... 46M10I14M5I19M 62/79 78.5% 94/94230402 0.0% 15/79 19.0% -32400638 -61829764 +3150 chr4 + 190214555 28440276 28440275 28440371 96 ATTAACTATCTTAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAGAGAAAGTGACAACTTATAAAATTAG chr4 + 94230402 42234743 42234742 42234838 42234743 42234742 42234838 96 ATTAGTGCTTTCAAAGCAAAGTAATTAAAGAAAAAAGAAAAATAAAAAAAAAGTGAAGCAAGATTAATAAGAAACAGGGAAAGTAGATAAAACAAG ....::xx.:.:........:x..xx...:......:.....x.........:x:..:x:.:.xx..x:...:.x..x..x.::xx......:x.. 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% -13794467 -80435935 +15853 chr4 + 190214555 28463088 28463087 28463461 374 TGCTTGTACATTTGGCTTTTCCTTTGTACATTTTATAATAGCTCAGTGGCTGTGTAGAAGGTAATCTACTTCTCAGTGTGCATGTTCTTTTACTACGGGCAATAATCTACTGAGTTCTGGAGTTCCCATAATATAAGCAACTCCCTTTGTGACTTTCAATTGCTGTAGGTTGGTAACGGTGCTTGGCACTTTAATAATTAGTCTACAGGGAGCTTTAATAGAGTAGGGCAACTGTTTTAATTAACTTAATCCCCAGAACATGAGTTGACCATTAGACATCAAATCACAGTTTAGCTCCAAGAGTATTTGAACTCTGAGGAAATCACA-TTTGTAACTACAGTGGGGATAACATTATCTCTTGTTA--TAAAACAATG chr4 + 94230402 74828907 74828906 74829267 74828907 74828906 74829267 361 TGTTGGTACATTTTTCTACTTCTTAG-----------ATGGCAGAAAAGCAGATGAGAAGATAATCCCCTTCATAGGGTGCAAGTTATTT-AGTGCAAATA-TAGTCTACTGGGTACTGGAGTGTTCATAGTACTAGCAACCCTTTTCATGACTTTCTATTGCTGTAGGTTTCTAATGATCCAAGGCACTTCAATAATTAGTCTACAGGGAGCTGTAATAGAGTAGGACAACAA--TTAATTAACTTAATCCCCAGTACATGAGTTGACCATGAGACATCAAACCACATTTTAGCTTGAAGGGGATGTGAACTCGTAGGAAATCTCATTTTTTAACTACTGTGGTG-TTGCATTCTATGTTTCTATCTAGCACAATG ..:.x........xx..x:.:...x.-----------..:..xx.:x:..x.xxx.....:.....:x....x:..x.....x...x...-.x.:.::::.-..:.......:..x.......x::....:..:x......:.::..::........x.............xx...:.:.x.xx.......:......................x............:....x:--....................x...............x..........:....x.......:x...:.x..x.......xx........x..-...x.......x....x.-.x:....x.x.x..x:..--..:x...... 26M11D53M1D10M1D132M2D91M1I18M1D18M2I10M 275/358 76.8% 361/94230402 0.0% 19/358 5.3% -46365819 -47864583 +3249 chr4 + 190214555 28475269 28475268 28475348 80 GGTGATACACA--------CCTGTAGTCCTAGCTACTCAGAAGGCTGATGTGGGAGGATCACTTGAGCCCAGGAGTTCAAGGTTACAG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.........--------.x......:.:.......:::........xx:xx.x.:.x.......:.....:..:.:x:..:.::.. 11M8I69M 56/80 70.0% 88/94230402 0.0% 8/80 10.0% -47557921 -46672481 +3168 chr4 + 190214555 28487490 28487489 28487547 58 AATTTTATTGAAGAGA-------CTGGTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTACCTAT chr4 + 94230402 50427836 50427835 50427900 50427836 50427835 50427900 65 AACTTCAGTGAAAGGAATGTCACTTGGTTTTTTTGTTTGTTTTTTTGGTTTTTTTTTTTAGCCAT ..:..:.x....::..-------:..........x...........x.............x.:.. 16M7I42M 48/58 82.8% 65/94230402 0.0% 7/58 12.1% -21940346 -72290056 +3073 chr4 + 190214555 28509656 28509655 28509737 82 TCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTTTC chr4 + 94230402 57372027 57372026 57372108 57372027 57372026 57372108 82 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTC .:.......::..x.::..x..:......:::.:..xx:.x..x::..:......:...::...x.....x..xx:.x.... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -28862371 -65368031 +3132 chr4 + 190214555 28540128 28540127 28540246 119 CTTCAATTTTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTCCTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...:.x.::.:.:.:....xx:x..:::..:..::.....:x..::.:.x....xx.:.:.x....xxx:::..x..:.:.:x.xx...:...:..:::::..:.:......:.:..:. 119M 66/119 55.5% 119/94230402 0.0% 0/119 0.0% -35156989 -59073413 +3723 chr4 + 190214555 28540150 28540149 28540267 118 CTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTC-CTTCTTTCCTTTCTTTCTTCCTTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...:x.....::.:.::::xx.x:.....:.:......:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx......-..:.::..:...............:. 92M1I26M 74/118 62.7% 119/94230402 0.0% 1/118 0.8% -35156967 -59073435 +3399 chr4 + 190214555 28540158 28540157 28540279 122 CTTCCTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTCTTTCTTCCTTTCTTCCTTCCCTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC---TCTCCCCTCTTTTCTTTCTTCCTTTTT ...:x.....::::.:.::xx.x:...:.....:....:.:x..::...x....xx...:.x.:.:xxx.:..:x:...:.:x.xx......---...::.:..:......:.....:.::. 92M3D27M 72/119 60.5% 119/94230402 0.0% 3/119 2.5% -35156959 -59073443 +4122 chr4 + 190214555 28540196 28540195 28540353 158 TTTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTCTTTCTTCCTTTCTTCCTTCCCTCCTTCCCTCCTACCTTTCTTTCCCCTTTCTTTCTGCTTTCTTTTTCTTT--------TTCTTTCCCTTTCTTGCTCAATCACCCA chr4 + 94230402 67728277 67728276 67728434 67728277 67728276 67728434 158 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATG-------CTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCT-CTCCATCACCCA .....x:..x....:....xx..::..:x.......x.x-------...x.x:.::..:...:.:..:.x.x:.....:.x:x..:.::......:x...x.:x.:x:..:.x..:.....:::x....:--------........::x..:.-...x........ 39M7D84M8I15M1D12M 98/150 65.3% 158/94230402 0.0% 16/150 10.7% -39188081 -55042321 +3116 chr4 + 190214555 28540197 28540196 28540295 99 TTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTCTTTCTTCCTTTCTTCCTTCCCTCCTTCCCTCCTACCTTTCT chr4 + 94230402 8009218 8009217 8009316 8009218 8009217 8009316 99 TTCTTTCTACTAGCTTTTCTCATTTATTTTCTTTCTTTTCTTTTACTTTTCTTAGCCAGTTCTTCCCATCATGCTCCTCTTCTTACATCTGACACTGCT ........x::xx::......x:..x:............::...x...:.:.:xx::xx.......:x..x.x..:.:..:...x.x..:x..x:.x.. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 20530979 NA +3038 chr4 + 190214555 28557220 28557219 28557273 54 TGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAAACAAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:............:........x.xx.x...x.:......x.x..:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -47475991 -46754411 +3174 chr4 + 190214555 28558242 28558241 28558312 71 CCCCCCCCCCCCCCACACACACACACACACGTTTCTTGTTAATTTGATTTTACCATCTGATAAACTATTTG chr4 + 94230402 64221455 64221454 64221523 64221455 64221454 64221523 69 CCTCCCCCCCCCCCACACACACACACACACACTTCTGG--AGCAAGACTTTTGCACCAGAAGAAGTTTTTG ..:...........................::....x.--.::xx..:...xx..:.x..x:..x.x.... 38M2D31M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -35663213 -58567189 +3100 chr4 + 190214555 28563738 28563737 28563793 56 ATGTATAAGCATGTAGGTATGGATGTGTGTGTTTGTGTGTGTGTATTTGCATAATT chr4 + 94230402 6857610 6857609 6857665 6857610 6857609 6857665 56 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATT ..:....x.:.::..x....:...........:...........x.xx:x...... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 21706128 NA +3026 chr4 + 190214555 28599628 28599627 28599691 64 TTAAACTAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTAATTCCCTTAGCACATTCAG chr4 + 94230402 78174042 78174041 78174105 78174042 78174041 78174105 64 TCAGGCTCAAACTTTTTTTTTTTTTTTTTTTCTCTCTTGTTACAATTTCTCCATACATATTTAG .:.::..x:..:...................:.:.:..x....x.x...:.:xx:..:...:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -49574414 -44655988 +3024 chr4 + 190214555 28621525 28621524 28621604 80 AACCTTGCCTTAACACAGTAGCAAGTATCCAAACTCGCTGAAGATTTAATTTTTACCAAGTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 54713626 54713625 54713705 54713626 54713625 54713705 80 AAATTTAACATGACAAAACAGCTAATAAGAAAATCCAATGAAGATGTGACCTTCAAAAAATCTTTTTTTCTTTTTTTTTT ..x:..:x.x.:...x.::...x.:..xxx...::.:x.......x.:.::..:.xx..:.........:.......... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -26092101 -68138301 +3354 chr4 + 190214555 28642284 28642283 28642331 48 ATAGAAGCACATTTCTGTTTGTTTTGTTTGTTTGTTTGTTTGTTTTTT chr4 + 94230402 69953332 69953331 69953379 69953332 69953331 69953379 48 ATAGAAGGGCAGTTTTGATTGTTTTCTTTGTTTGTTTGTTTGTTTTTT .......x:..x..:..x.......x...................... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -41311048 -52919354 +3363 chr4 + 190214555 28676361 28676360 28676432 72 GCACCTTTAATCCCAGCTATTCAGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGAAGATGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x..:.:.......:.::::........x.xx.x...x.:..............x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -47356845 -46873557 +3151 chr4 + 190214555 28688905 28688904 28688981 77 TTTTTGTTTGTTTGTTTGTTTGTTTTTAAGTTTATACTATTG-TTGTTTTTGTATTTTTGCAATTTAACTTAAGGTTT chr4 + 94230402 43231809 43231808 43231886 43231809 43231808 43231886 78 TTTTTGTTTGTTTCTTTGTTTGTTTTTAAGTATATTGTATTGATTATCTCCACTTCTCAGCATCTTTTCCCAAAGTCT .............x.................x...xx.....-..:.:.::::x.:.:x...x:..xx.::..:..:. 42M1I35M 55/77 71.4% 78/94230402 0.0% 1/77 1.3% -14542904 -79687498 +3483 chr4 + 190214555 28738027 28738026 28738170 144 TGAACAAAAGAAAGAGAAAAATAAGAGAGAAGGAGAGGGGGAAAAAGAAAAAAGGAA----GGGAAAAG--AAAGGGAAACAAAGAAAGAAGAGAGGAGAGAAGGAAATAAAAAGGAAGGAAGAAAGGAAGGAAAACAGAAGGGAGAGAG chr4 + 94230402 32897966 32897965 32898115 32897966 32897965 32898115 150 TGAATCAGAAAAGGGGAAATGGAACAGAACAACTTCAGAGAAAGAAGACAAAATCAACGCTAGGAACAATTAAAGGGAAATTAAGAAAGACAAAAAGTGAAGAAGGAAAATAAAGATTGGATGATAAAAAAGGGGACAGAGAAAAGACAG ....:x.:.:..:.:....x:x..x...:x.:xxxx:.:.:..:....x....xx..----:....x.:--.........:x........x:.:.:.x..::.:.:..x.x....:xx...x..x.::..:.:::.....::::...x.. 57M4I8M2I79M 88/144 61.1% 150/94230402 0.0% 6/144 4.2% -4159939 -90070463 +3617 chr4 + 190214555 28738044 28738043 28738174 131 AAAATAAGAGAGAAGGAGAGGGGGAAAAAGAAAAAAGGAAGGGAAAAGAAAGGGAAACAAAGA-AAGAAGAGAGGAG--AGAAGGAAATAAAAAGGAAGGAAGAAAGGAAGGAAAACAGAAGGGAGAGAGACAG chr4 + 94230402 1317397 1317396 1317530 1317397 1317396 1317530 134 AAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAG ......:x...:x.:..xx:.:....:...:....:.:...:.........x:.xx.x..x..-...x:..:.x...--..:...:.:x:..:..::..x.x:.:x..:.:....x.x.:.xxx...:..:x.. 63M1I13M2I55M 83/131 63.4% 134/94230402 0.0% 3/131 2.3% 27420647 NA +3127 chr4 + 190214555 28739800 28739799 28739864 65 TATGCATGTATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATATATATATATATAATT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x...x.:...x.................:.xx:.:.:x.:...:....:..x...:..:x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -57094733 -37135669 +3515 chr4 + 190214555 28761315 28761314 28761396 82 ATGGTGGCGCACACCTGTAGTCCAAGCTACTTGGGAGGCTGAGGCAGGAAAATCACTTGAGCCCAAGAAGTGGAGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....:....:--......:.x.........::........x.xx.x:..x.......:....::.:x.xx:.....:.. 13M2D67M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% -47271883 -46958519 +3007 chr4 + 190214555 28779896 28779895 28779935 40 TTTCCTTTCTCTTCTTTCTTTCTTTCTTTCCTTTCTTTCT chr4 + 94230402 37318514 37318513 37318553 37318514 37318513 37318553 40 TTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTCT .....:...:........:............:..::.... 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% -8538618 -85691784 +3837 chr4 + 190214555 28781586 28781585 28781657 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.............:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -47251620 -46978782 +3412 chr4 + 190214555 28792508 28792507 28792568 61 GTTCCCATCATACATATATATAATAT---ATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529239 72529238 72529302 72529239 72529238 72529302 64 GTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x..x:....x..:..x...x.:..---...:.:...................:......... 26M3I35M 50/61 82.0% 64/94230402 0.0% 3/61 4.9% -43736731 -50493671 +3412 chr4 + 190214555 28792508 28792507 28792568 61 GTTCCCATCATACATATATATAATAT---ATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525666 72525665 72525729 72525666 72525665 72525729 64 GTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x..x:....x..:..x...x.:..---...:.:...................:......... 26M3I35M 50/61 82.0% 64/94230402 0.0% 3/61 4.9% -43733158 -50497244 +3217 chr4 + 190214555 28792531 28792530 28792614 84 TATATATATGTGTGTGTGTGTGTGTGTATATATATATATATTACATTATATATATATATTATATATTATATATATATATATATT chr4 + 94230402 39937175 39937174 39937250 39937175 39937174 39937250 76 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATA--------TATACATAGATGTGCATT ...............::...x.......:xxx.x..:...:...xx..:.:...:...--------....:...x..:.::... 58M8D18M 56/76 73.7% 76/94230402 0.0% 8/76 10.5% -11144644 -83085758 +3143 chr4 + 190214555 28792543 28792542 28792605 63 TGTGTGTGTGTGTGTATATATATATATATTACATTATATATATATATTATATATTATATATAT chr4 + 94230402 83657515 83657514 83657577 83657515 83657514 83657577 63 TGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAAATGCTATGGATAT ...x...x.......::.............x.x:.........x..xx.x..::...:x.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -54864972 -39365430 +3082 chr4 + 190214555 28842807 28842806 28842864 58 AACAGAGCAAAACTCTGTCTTAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAA chr4 + 94230402 18047932 18047931 18047989 18047932 18047931 18047989 58 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAA ......:...xx..:.x................x....:...xx...:.x..x.:... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 10794875 NA +3010 chr4 + 190214555 28864325 28864324 28864377 53 CTTTTTTTGTCTGTTTGCTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 3272670 3272669 3272722 3272670 3272669 3272722 53 CTGTTGTTGTGGGTTTGGTTGGTTGGTTTTTTTTGGTTTTTTTTTTTTTTTTT ..x..x....xx.....x......xx........xx................. 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 25591655 NA +3139 chr4 + 190214555 28880550 28880549 28880589 40 CTTCCCCACTCTTTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .....:.x....:..........x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -46367499 -47862903 +3193 chr4 + 190214555 28880555 28880554 28880591 37 CCACTCTTTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248052 75248051 75248088 75248052 75248051 75248088 37 CCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x....:............................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -46367497 -47862905 +3040 chr4 + 190214555 28880556 28880555 28880593 38 CACTCTTTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601302 12601301 12601339 12601302 12601301 12601339 38 CGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA .:....:............x.......:.......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 16279254 NA +3007 chr4 + 190214555 28894260 28894259 28894317 58 TATGTGTGTATATATATGTGTATATATATATGTGTGTGTGTATATATATATATATATA chr4 + 94230402 6200763 6200762 6200820 6200763 6200762 6200820 58 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATA ...x.x...::............x...:.....x.....:.x.x:.:.:...x..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 22693497 NA +3053 chr4 + 190214555 28894262 28894261 28894340 79 TGTGTGTATATATATGTGTATATATATATGTGTGTGTGTATATATATATATATATATGCTGATATAAATGCTGAGAAAA chr4 + 94230402 41749096 41749095 41749174 41749096 41749095 41749174 79 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAAAGAAGA .:.:.:x.:.:.:..:.:x:.x.....xx..:....:....:....:...:..:..:...x....xx...:x:....:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -12854834 -81375568 +3256 chr4 + 190214555 28897642 28897641 28897700 59 TGCTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGA chr4 + 94230402 76033205 76033204 76033263 76033205 76033204 76033263 59 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...x.x......:............:........x.xx.x...x::........::.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -47135563 -47094839 +3217 chr4 + 190214555 28924514 28924513 28924644 131 ACATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCAGGAG---------GCAGAGCTTGAAG-TGAGCAGAGATG-GCGCCA---CTGCACTCCAGCCTGGGGGTCAGAGCGAG chr4 + 94230402 76033196 76033195 76033337 76033196 76033195 76033337 142 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAG ...::....:.--...x......:.........:.::........x.xx.x...xx:.x....:....:..---------.:...:.x...x.-::......x:..-..x.:.---....x.-.....x...x.::::x..x... 11M2D58M9I13M1I12M1I6M3I6M1D22M 91/128 71.1% 142/94230402 0.0% 17/128 13.3% -47108682 -47121720 +3206 chr4 + 190214555 28928640 28928639 28928753 114 TGTTATTTCCTTTTTCTTTCTTTTCTCTTCTCACCTGTTATTCCT-TTTCTTTTTCCTTCCTTTCTCATCTTCCTTATTTCATTATATATATTTTATATATATATTTATTTGTAT chr4 + 94230402 81722724 81722723 81722837 81722724 81722723 81722837 114 TGTTATTTTTTTTATCACTACTTTCTTCACTTACGACTAACTTCTGTCTCTATTTTACCCCTTTCTACTCTTCTAT-CTTCTTCAGTTGTTCTTTATATACATATATATATGTAT ........::...x..x:.x:.....::x..:..xxx.x.:.:..-.:...x...:x::.......xx.....:x.-:...x.:.xx.:.x:........:....x...x..... 45M1I30M1D38M 75/113 66.4% 114/94230402 0.0% 2/113 1.8% -52794084 -41436318 +3290 chr4 + 190214555 28953849 28953848 28953938 90 AAATCTTGAAAAAATAACAAATGACCTAATTTAAGAGAATGTCA---GTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGTAA chr4 + 94230402 68982908 68982907 68983000 68982908 68982907 68983000 93 AAATGTTGATATTTTATCATATTGATTAGATTCAAAATATTTCAAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTCCATAGTAA ....x....x.xxx..x..x..x:x:..:x..x.:.:x..x...---...:.x...:...........:...............::x.:.... 44M3I46M 64/90 71.1% 93/94230402 0.0% 3/90 3.3% -40029059 -54201343 +3004 chr4 + 190214555 28953886 28953885 28953924 39 AATGTCAGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 26578259 26578258 26578297 26578259 26578258 26578297 39 AATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT ...x.x.x............................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 2375627 NA +3180 chr4 + 190214555 28953894 28953893 28953949 56 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGTA-----ACACCAAAATTC chr4 + 94230402 6554023 6554022 6554077 6554023 6554022 6554077 55 TTCTCTCTCTCTCTCTCTC------TTTTTTTTTTTTTTTGGTAGGAATACACTGAAGTTC ...................------...................-----....::..:... 19M6D19M5I12M 47/50 94.0% 55/94230402 0.0% 11/50 22.0% 22399871 NA +3034 chr4 + 190214555 29001961 29001960 29002047 87 AGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...x..:..:x.:...xx.x...x.......:....:..........:...x.:::xx...:.:::x.:..x:x...::.x..x... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% -46239546 -47990856 +3005 chr4 + 190214555 29001979 29001978 29002064 86 AAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 78784181 78784180 78784266 78784181 78784180 78784266 86 AACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAA ..x:....::.xx..::.....x...:x.:.:.....:..x:...x........:..:.x..x.xx.:.:.:.....::::x:... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% -49782202 -44448200 +3084 chr4 + 190214555 29001983 29001982 29002068 86 AAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAACAAA chr4 + 94230402 78784181 78784180 78784265 78784181 78784180 78784265 85 AACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAG-AAGAGGCAAA ..x:....:..xx..::.....x...:x.:.:.....:..x::..x........:..:.x..x.xx.:.:.:...-....::.... 75M1D10M 57/85 67.1% 85/94230402 0.0% 1/85 1.2% -49782198 -44448204 +3882 chr4 + 190214555 29001983 29001982 29002123 141 AAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC-AAACAAACAAACAAACAAACAAAGAGAAAGAAAGAAAGAAAGAAGGAGGAAGAAAAGA chr4 + 94230402 84536569 84536568 84536704 84536569 84536568 84536704 136 AGGGAAAGGGAAAGAAAAAAATAACAAAA-----ATAGGAAGTGAAGAAA-AAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGA .::.....:........:...x..x:...-----.x..:...x:......-....::.:.::..:..:.....:xx.x.x.:.-...:x.:..:x::..xx.x:x..........x.:.x....:.:.xx:...:...:... 29M5D16M1D32M1I58M 89/135 65.9% 136/94230402 0.0% 7/135 5.2% -55534586 -38695816 +3068 chr4 + 190214555 29002048 29002047 29002123 76 AGAAAGAAAGAAAGAAACAAACAAACAAACAAACAAACAAAGAGAAAGAAAGAAAGAAAGAAGGAGGAAGAAAAGA chr4 + 94230402 31785826 31785825 31785901 31785826 31785825 31785901 76 AAATAGGACACAGGATACAAACATGGGAGGAGATTTACAAGGAGAAAAAAAAAAAGAAAGAAAAAGGAAGATAAAA .:.x..:.x:x.:..x.......x:x:.:x.:.:xx....:......:...:..........::.......x..:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -2783778 -91446624 +3086 chr4 + 190214555 29008274 29008273 29008354 81 AAAACAGACAAATACCAATACACAAGAAATACACACACACACACACACACACACACACACACACACACACACTTCAGGTTT chr4 + 94230402 66743614 66743613 66743694 66743614 66743613 66743694 81 AAAACAGATAGGTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCAGTCTTCAGGTTT ........:.::.:.:xxxxx.xx...x.:.:x:....x...x..x:..................xx..xx.......... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -37735340 -56495062 +3009 chr4 + 190214555 29023836 29023835 29023916 81 AAAATGAGTTGAAAAATATCCCTTCAGATTTTCTTTTTAAAATTTTTTTCTTCAAAGTTTGGGTAAACTTGGTTGTGAAGA chr4 + 94230402 77514192 77514191 77514272 77514192 77514191 77514272 81 AAAGTGATTGAAACTAAATTGTAACAGATTTTCATTTTAGAATTTCTTTCTTCTTCATTTGGTAAATATTGGTTGTAGAGA ...:...x.x:..xx.x..:x:xx.........x.....:.....:.......xxx:.....xx..xx........::... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -48490356 -45740046 +3381 chr4 + 190214555 29031193 29031192 29031310 118 TCCTCCTCCTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTCCCCCTTCCCCTCCTCGTCCTCCTTCTCCTCCTCCTCCTCATTCTC---CTCTTCCTCCT chr4 + 94230402 1462819 1462818 1462939 1462819 1462818 1462939 121 TCCACCTCCTCCCTCACCGCCTCCTCCCCCTCACCCCGCGGCCCCCGCCGCTTCCCGGCTCCCCAGAGCACCTTGTCGGCCACCAGAGCCTCGCTCGCCTCCTTCTTGGGCTCGCCCTTCT ...x...........x..x.............x:..:x.xx.:..:x..x..:.:.xx.::...xxxx.x...:x...x..x..xxxx....x::.x....x....:---...x:...:.. 107M3I11M 77/118 65.3% 121/94230402 0.0% 3/118 2.5% 27568374 NA +3190 chr4 + 190214555 29031195 29031194 29031278 84 CTCCTCCTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTCCCCCTTCCCCTCCTCGTCCTCCTT chr4 + 94230402 44836693 44836692 44836776 44836693 44836692 44836776 84 CTCCTTCTTCCTCTTCTCCTCCTTCACGTCCGTCTTCTTGATCTCTGCCTTGAAAGCCTCCGCCTCCCCGTTCTGGTCGTCCTT .....:..:.....:........:.x.x...x:..:.::xx:...:x...:xxxxx.....x...:...x.:..x...x..... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -15805498 -78424904 +3080 chr4 + 190214555 29031392 29031391 29031471 80 ATCCTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCCCCTCCTCCTCTTTCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCT chr4 + 94230402 34908176 34908175 34908255 34908176 34908175 34908255 80 ATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ...x::.....xx...x:...:........:...x....:.......xx..x:.xx.x.x:..x:.x..x..:.....:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -5876784 -88353618 +3328 chr4 + 190214555 29036980 29036979 29037040 61 TCAAGGATTATATATATATATATATATATATATGTGTGTGTGTGTGTGTGT------GTAATTCTTT chr4 + 94230402 6857603 6857602 6857669 6857603 6857602 6857669 67 TCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTT .....:.x......::..:...::....x..:.......x...........------:.....:... 51M6I10M 49/61 80.3% 67/94230402 0.0% 6/61 9.8% 22179377 NA +3054 chr4 + 190214555 29036989 29036988 29037032 44 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 6857610 6857609 6857653 6857610 6857609 6857653 44 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGT .......::..:...::....x..........x........... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 22179379 NA +3279 chr4 + 190214555 29044344 29044343 29044449 106 TAGAAAGTCCATAGAAA---AGATAATACTCTATTGGTAAAAGTCTTCTAGA------AATAT--ATATACACACACACACACATACACACACACACACACATGTATATATATGTAT chr4 + 94230402 74526010 74526009 74526123 74526010 74526009 74526123 114 TATATAGTCTGTATAAACCTAGAGGACACTTTCCTG---AAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ..x.x....::..x...---...x:.:...:.x:..---...:.x..x....------..:.:--.x..x...............:x...:.....x.:.:..:::........... 17M3I16M3D13M6I5M2I52M 76/103 73.8% 114/94230402 0.0% 14/103 13.6% -45481666 -48748736 +3912 chr4 + 190214555 29080407 29080406 29080534 128 CTATGGTATAAAATGTCCAGAAACCTCTCTCTCCCTCTCTCTCTCTCTCTATATATATATACACATATATATATACACACACACAAATATATATATACACAAATATATATATACACACATATATATAT chr4 + 94230402 60831504 60831503 60831623 60831504 60831503 60831623 120 ctatgattcaaca-gttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-------GTCTGTGCGCATGTGTGTATAT .....:.x:..x.-..:.xx.x..x.x...x..:..x.............:.:.......::::...:.:.:.::.....x:x:.....:..x....::-------:.x.:.:.:..::.:.:..... 13M1D85M7D22M 79/120 65.8% 120/94230402 0.0% 8/120 6.7% -31751097 -62479305 +3207 chr4 + 190214555 29080429 29080428 29080518 90 ACCTCTCTCTCCCTCTCTCTCTCTCTCTATATATATATACACATATATATATACACACACACAAATATATA-----TATACACAAATATATATAT chr4 + 94230402 60831529 60831528 60831623 60831529 60831528 60831623 95 ATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT .:..x.....x:............x.x.......:.:..:...:.:.:::.:..x:x:.x.:.x..x....-----.:.:.:..x:.:.:..... 71M5I19M 60/90 66.7% 95/94230402 0.0% 5/90 5.6% -31751100 -62479302 +3343 chr4 + 190214555 29080436 29080435 29080535 100 TCTCCCTCTCTCTCTCTCTCTATATATATATACACATATATATATACACACACACAAATATATATATACACAAATATATATATACACACATATATATATA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTAT------ATATGTGTATACACACACGCACACTTCTAAATACATTTATAT-GGTCTGTGCGCATGTGTGTATA ...x:....x...........x.:.:...------....:.:...........:..x.:x.x..x.....:xx....-x:.x.:::.:...:.:.:.... 29M6D42M1D22M 66/93 71.0% 93/94230402 0.0% 7/93 7.5% -31751094 -62479308 +3104 chr4 + 190214555 29080447 29080446 29080482 36 CTCTCTCTCTATATATATATACACATATATATATAC chr4 + 94230402 70237110 70237109 70237145 70237110 70237109 70237145 36 CTCTCTCTCTATATATACATACACATACATATATAC .................:.........:........ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -41156663 -53073739 +3076 chr4 + 190214555 29103026 29103025 29103110 85 TTCATTTTTCTTTTTTCTTTTTCTTTTTTTCTTTTTTCTTTTCTTTTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTT chr4 + 94230402 27089049 27089048 27089133 27089049 27089048 27089133 85 TTCATTCTCCATCTTTTTTATTCCTCTGTTCTGCTCTCTTTTTTCTTTACTGCTGGTACTTTTTTCCCCAGTCCTTTTTCTTCTT ......:.:.x.:...:..x...:.:.x....x:.:......:.:...x::x..xx.x:...:..::.:xx..:.....:..:.. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 2013977 NA +3147 chr4 + 190214555 29103062 29103061 29103121 60 TCTTTTCTTTTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTAAGACAGA chr4 + 94230402 50052656 50052655 50052715 50052656 50052655 50052715 60 TCATCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTTAAGTTGGA ..x.::..:.::.:.....x:x....:x.:.........................x::.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -20949594 -73280808 +3158 chr4 + 190214555 29103083 29103082 29103130 48 CTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTAAGACAGAGTCTTGATC chr4 + 94230402 52752937 52752936 52752984 52752937 52752936 52752984 48 CCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATTAGTC .:...:..::.......................x.....:.x..::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -23649854 -70580548 +3065 chr4 + 190214555 29105753 29105752 29105854 102 TATAAGTTGAAAGGGCTACAAAGAAAAGTTTTAAAAAATGTGACAGTAAGTATATGCCAGGGTTGTATATGTATGTATAGGTAGAAGGATATCACGGTGACC chr4 + 94230402 27683644 27683643 27683741 27683644 27683643 27683741 98 TAGAAGGTAAAAAGA----GAGAGAAAGTAGAAAGAAATATATCACTGAGTATATGCCAGGTGTGCATATATATGTGTGTGTGTATGGATTTGCAGGAGACC ..x...x.:...:.:----:.:::.....xxx..:....:.:x..x.:.............xx..:....:.....:.:x..:x.x....x.xxx..x.... 15M4D83M 65/98 66.3% 98/94230402 0.0% 4/98 4.1% 1422109 NA +3332 chr4 + 190214555 29148112 29148111 29148194 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -46885085 -47345317 +3516 chr4 + 190214555 29181994 29181993 29182088 95 TAAAAATGTAAACAAACAAACAAACAAAAAAACAATTCTTAAAATAAAA-------ATTTTTTGATTT----------------GGAAATATGTCAGCAATGCTTATTACGGAAGAAT chr4 + 94230402 68927888 68927887 68928005 68927888 68927887 68928005 118 TAAAAATTAAAACAAACAAACAAACAAAAAAAGAATTCCACAAATAACATATGCGTACTTTCTTATATTGTCATTATTTATAGCAGAGGTATGCCAGCAATGGCTTATACTAAAAAAT .......xx.......................x.....:xx......x.-------.:...:.x..x.----------------:..::....:........x:.xx...x:..:... 49M7I12M16I34M 73/95 76.8% 118/94230402 0.0% 23/95 24.2% -39745894 -54484508 +14423 chr4 + 190214555 29210714 29210713 29211381 668 CCCAAAGGCTTATGAGGTATCGGCAACTTTGCTCTTTTAATCATATTATATGGTGGATTGAGTTACCTGCTAAGAGTTGAAATAAAGAATCTCACCAGCAAACTCAAAATCCACTTAAGAATATGAACTAAGATCTGCAT-------TTTATTCAAATATATGAAATGCTTTTTAATTGGAAGAAAAAATA-ACTTGGGAAGTGAGCATATAGCTGTAACTGCTAATTCTGCCTCTTCCTGCTGTTACAATGATTCTAACAGGGGAGATTATTAAATGAAATCCTGAAGTAATGGAAAGAACGATTGTGTTAAAAATGCTGAGACACAGGTCAACTGAGACTTGTGATGTTATTACCTTTCTGCTTGGCAGTACCTCCGCAATACAATATCGGACTGCAGAGTTCAGCAGGAAGGAAGACAATG-TAATGATGATTCTATTTTTCATGTAGCTTTTCTTTGTACTTGTAGAATATCCTACATCACATTGCTTCAAAAACCAGGAA-CTGCCACACTGTGTTCTGCCGCTTGTAAGTAATTAAGAAACATTTAAAAGGCTTTATATTCAAG----ACTGAGTTAGACTGTCTGCAAAATGAAAGAAT---GGAAATAAAGATTAAGAATATGTTAGTCCTGGCAAAAGAAGAGAATTAACGGATTAGCCAAGGAATCTAAAGTGTT chr4 + 94230402 74606642 74606641 74607296 74606642 74606641 74607296 655 CCTGAAGGATTATACTATATCAACAGTCATGCT-TTGTAATTTTATTAAAGGCAGAATTATGTTGCCCGTTTATATTTCAAATTCAAACTCTGAGATAAAAATTCAATATCTATCTATTTGGATAAA-TAAGTTTTAAGTAACATTGTTCATTAAAAAATATCAATTGCCCTTTAATCCACAGCAAAAGAATGCTACAGAAG--AGCACACAGA---AATGGTTAATTCGGCATGTTCTTACTGCTGATACAATTCTAACCCAGGAGAGTATTAAATGAAATCATGCAGTAATGGAAAGGATGAGCATGTTAAAAGGACTGAGTCAAAGACCAAAAGAGACTGATGATGCAATTACCCTGCTTCTTGGCTGTGTAATACGGATGTGATAAGGGCCTGCACAGTTCAACAGTAAGGATGAAGGAGCTAACAATAATTCTAATTTTGAAGTAGGTTTTCTTTGTGCTAGTAAAACATGGTGTATATCATTGATTAGAATGCCAAGAAGGTTCTACATTGTCATAT-----TTGCAA------AAGAGA-ATTCTAAATGAGAGGTATTCAAATACCATTTAATGAGAAGG--TAAAAAGCTAAAGAATGGAGGAAGAAAGAACTGAGCAAATGTTAAGTTTAACACTATCAGTATATTA---------CTAAGAAGAATAAAGTGCT ..::....x....:xx:....::..:::x....-..x....:x.....x.x.xx.:...:x...:..:.:.x.x.x..x....xx.:.x...x.xxx:x...:....x...:.::..xxx:x..:..-....x.:.:x:.-------..:...x...x....x..x...::......:x:x..x....:x.-:..xx:....--....:.:..x---..:x.:......x..x.x...:.:...:.:xx.::........xx:.....x..............x..x............:.:..x::........:x:.....x..x..::...xx......x:.....:x......:.x..x......x..::xx:xxx:..:::...xx..x.....x......:...x.....x..x::x.-...::..:......x....x.x....x..........:..x...:..:..xx.::..xx.....x..x:..x:...:...-x.x.:...:...xx.x.-----...:..------....:.-...:x...x.xxxx:.......:----.:.x.:.x...xx.--.:x...::x.......---....:x..::.:.:..x.x......:x::.::..xx.xx..x:x....---------.:...:.:xx.......:. 33M1D93M1D12M7I44M1I10M2D10M3D207M1I80M1I17M5D6M6D6M1D23M4I14M2D16M3I48M9D19M 417/638 65.4% 655/94230402 0.0% 47/638 7.4% -45395928 -48834474 +3193 chr4 + 190214555 29247258 29247257 29247345 88 GTGCACCTGTAGTTCTAACTACTCAGGAGGTTGAGGCAGGAGGATTGCTTGATCCCAGGAGTTTAAGACCAGCCTGGACAACATAGTG chr4 + 94230402 76033204 76033203 76033286 76033204 76033203 76033286 83 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG-----CTGTAGAACATGATG ......x........:.:.....::::...:....x.xx.x.:.x::.....x.....:..:..x:.:-----...x.x.....::.. 68M5D15M 57/83 68.7% 83/94230402 0.0% 5/83 6.0% -46785946 -47444456 +3062 chr4 + 190214555 29252230 29252229 29252276 47 TAACAAAACAAAACAAAAAACAAACAAAAACAAACAACAAAAAAAAC chr4 + 94230402 79648959 79648958 79649005 79648959 79648958 79649005 47 TGATAATCCAAAACAAAAAACAAACAAACAACAACAACAAAAAAAAC .:.:..xx....................x.xx............... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -50396729 -43833673 +3227 chr4 + 190214555 29253340 29253339 29253389 50 AAACCTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGT chr4 + 94230402 76607301 76607300 76607350 76607301 76607300 76607350 50 AAACCTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGT .........:........x....x.:...........:.:::.::..... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -47353961 -46876441 +3077 chr4 + 190214555 29254683 29254682 29254741 59 TATATATATATATACACACACACATACATACATAACTACATACATATAT----ATTTATATAC chr4 + 94230402 89823932 89823931 89823994 89823932 89823931 89823994 63 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGC .......:x...:...........:...:x:.......:...:.::...----.x......:. 49M4I10M 46/59 78.0% 63/94230402 0.0% 4/59 6.8% -60569249 -33661153 +3100 chr4 + 190214555 29259293 29259292 29259344 52 TATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .....:.:.::...:.....x............x.:.x:.:...:....... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -15556307 -78674095 +3034 chr4 + 190214555 29259315 29259314 29259383 69 TGTGTGTATATATATACATACACACACACACACACACACACACACATATGTGGGGGAAAGAGAGAGAGA chr4 + 94230402 4409082 4409081 4409150 4409082 4409081 4409150 69 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAAACAAACAGAGA ...:::..........:...........x.x.........:x:x.x:xx.::.::....x.:.x..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 24850233 NA +3507 chr4 + 190214555 29264545 29264544 29264620 76 CTATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------TATATGTATCTATATATATAT chr4 + 94230402 23247720 23247719 23247806 23247720 23247719 23247806 87 CCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------..:...x..xx.......... 55M11I21M 57/76 75.0% 87/94230402 0.0% 11/76 14.5% 6016825 NA +3585 chr4 + 190214555 29264563 29264562 29264673 111 ATATATATATATATATATACACACACACACACACACATATATGTATCTATATATATATACACATACATATGTGTGTATA-TATATATATACACATACATATGTGTGTATATA chr4 + 94230402 54005688 54005687 54005799 54005688 54005687 54005799 112 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTA .:.:....:...x......:...:.............x.x..x.:..:xxx.::.:.x.x.xx.........:.:x:..-..xx.x......::.:.xx:.x.....:.x.. 79M1I32M 74/111 66.7% 112/94230402 0.0% 1/111 0.9% -24741125 -69489277 +3120 chr4 + 190214555 29264570 29264569 29264618 49 TATATATATATACACACACACACACACACATATATGTATCTATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x....................x....xx...x....::... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -60559362 -33671040 +3127 chr4 + 190214555 29264731 29264730 29264779 49 ATATATATATACACATACATATGTGTATATATATATATATACACATACA chr4 + 94230402 27759113 27759112 27759161 27759113 27759112 27759161 49 ATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA ....:...x....x.:..............::..:....:..:..:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 1505618 NA +3040 chr4 + 190214555 29279101 29279100 29279184 84 CTTTCCTTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:::.:..::.x.:...x:.:......:::.:..xx:.x..x::.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -28092925 -66137477 +3164 chr4 + 190214555 29279105 29279104 29279206 102 CCTTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTC chr4 + 94230402 57372026 57372025 57372127 57372026 57372025 57372127 102 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGATATTTC .:..:.:.:.::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x:x..x..xx..x.... 102M 63/102 61.8% 102/94230402 0.0% 0/102 0.0% -28092921 -66137481 +3304 chr4 + 190214555 29279109 29279108 29279192 84 CTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:....:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -28092917 -66137485 +3227 chr4 + 190214555 29279113 29279112 29279205 93 CTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTT chr4 + 94230402 57372026 57372025 57372118 57372026 57372025 57372118 93 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTT ..:..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x:..:x.. 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% -28092913 -66137489 +3462 chr4 + 190214555 29279190 29279189 29279299 110 TCTTTCTTTCATCTTTCTTTCTTTCTTTCTTTCTCTTTCCATCTTTCTTTCTTTCCTTCCTTT-TTCTTTTTATTTGA-------TCCATATTTTCTTGTGAGTTTTTGAACTTCTTT chr4 + 94230402 28987825 28987824 28987942 28987825 28987824 28987942 118 TTTTTAACTTACCTGTTTTATTTTTTCTCTTTCTCACTTCATCTCACTTTCTTACCTTCCTTTATCCTCTTGACTTGAGTATTAGCACATCTTTCTTTTTTTTTTTTTGTCCTTTCTT .:...xx:.:.:..x.:..x:...:.:........x:.:.....:x.......x.........-.:..:..x.:....-------:x...x...::..x.xxx......xx...::.. 63M1I14M7I33M 75/110 68.2% 118/94230402 0.0% 8/110 7.3% 291365 NA +3180 chr4 + 190214555 29332657 29332656 29332727 71 CTTCAAACGTGAGAGAGAATCAAAGCCTTTTGCAAACAAACAAACAAACAAACAAACAAACAAAAAAGAAC chr4 + 94230402 24270287 24270286 24270357 24270287 24270286 24270357 71 CCTCAAAAGCAATAGAAATACAAAGACTCTAGTTCATTAAAAAACAAACAAACAAACAAAAAGAAAAAAAC .:.....x.::.x...:.xx.....x..:.x.:xx.:x..x...................x.:....:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 5062370 NA +3009 chr4 + 190214555 29332690 29332689 29332738 49 AAACAAACAAACAAACAAACAAACAAACAAAAAAGAACCTATGGAAAAA chr4 + 94230402 33001613 33001612 33001661 33001613 33001612 33001661 49 AAAAAAACAAACAAACAAACAAAAAACCACTAAAGAACCTGTAAAAAGA ...x...................x..x..xx.........:.::...:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -3668923 -90561479 +3933 chr4 + 190214555 29340452 29340451 29340531 80 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCCCTTGAACCCAGGAGATGGAGGTTG chr4 + 94230402 76033197 76033196 76033274 76033197 76033196 76033274 78 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::.........:--......:.........::::........x.x..x...x.x...........:..x.xx:..:.. 14M2D64M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% -46692745 -47537657 +3036 chr4 + 190214555 29391784 29391783 29391857 74 TCTGCATATATATATGTGTGTGTATATATATATATATATTCTGCACATATATTTATAATCTGCATATATATTCT chr4 + 94230402 22187373 22187372 22187446 22187373 22187372 22187446 74 TTTGAATAAGTAAATGTGTGTATATATATATATATGTAATTTACTCATTTATTAAGTATTTTCATTCAAGTTTT .:..x...x:..x........:.............:..x.:.:.x...x....x.xx..:.x...x:.x:..:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 7204411 NA +3373 chr4 + 190214555 29405047 29405046 29405146 100 ACAGGAAGAGAGAG--AGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGAAGAGAAGAGAAGAGAGAAGAGAGGAGAGAGAGAAGAGAGAAGAGAGAGAG chr4 + 94230402 51148377 51148376 51148478 51148377 51148376 51148478 102 ACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ....:....:::..--.x...............:.....x...::xxx..:.xx::..x:...x.x:..:.:x::....:.:.:...::.:.:...:..x.. 14M2I86M 64/100 64.0% 102/94230402 0.0% 2/100 2.0% -21743330 -72487072 +3518 chr4 + 190214555 29405053 29405052 29405150 98 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGAAGAGAAGAGAAGAGAGAAGAGAGGAGAGAGAGAAGAGAGAAGAGAGAGAGAGAG chr4 + 94230402 51148381 51148380 51148478 51148381 51148380 51148478 98 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG .:...:::..xx.x...................:.x...::xxx...:xx..:.x.::.x.x.:::..x......:..:.:..:.:.::...:..x.. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% -21743328 -72487074 +3052 chr4 + 190214555 29408067 29408066 29408109 43 GCTGGGCAATTTACAAAAAAAAAAAAAAAAGAGAGAGAGAAAG chr4 + 94230402 11613197 11613196 11613239 11613197 11613196 11613239 43 GCAGAGCAATGTTAAAAAAAAAAAAAAAAAGAGAGAGAGAAAG ..x.:.....x.xx............................. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 17794870 NA +3532 chr4 + 190214555 29438840 29438839 29438929 90 GCACCTGTAATCCCAACTACTCAAGAGGCTGAGGCAAGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.:...:.....::.:........x.xx.x...x...........:.:..x:xx:..:..:..------:.x...:..... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% -46594366 -47636036 +3769 chr4 + 190214555 29443687 29443686 29443768 82 GTGGTGGCACACACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTAAACCTGGGAGGTGGAGGCTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x..................::........x.xx.x...x.....:....::.:..x.xx:.....::. 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% -46589514 -47640888 +3082 chr4 + 190214555 29453975 29453974 29454061 87 GAATTATTTATACCATATATGTATGTGTGTGTGTGTGTGTATATGTATATATGTTTGTACATGTATATACGTATGTGTATATGTATA chr4 + 94230402 85834525 85834524 85834608 85834525 85834524 85834608 84 GGGTTTTTTATTC---ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA .::..x.....x.---..x...:.x...............:...xx..:..x.:x.::.:.....x....:.:.x.:.::.:::... 13M3D71M 57/84 67.9% 84/94230402 0.0% 3/84 3.6% -56380550 -37849852 +3136 chr4 + 190214555 29457968 29457967 29458105 138 AAGCCCCTTTCTGTCTTGTCTTGTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCT chr4 + 94230402 6297111 6297110 6297248 6297111 6297110 6297248 138 AAACTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTT ..:.::...:..:.x..x.xx.x......x:...x.x.x....:.x..::..xx:::x.:.:.::x:x.....x.:.......x.:x.:...:.x::..:..:.x.x:xx.::...x.x:.xx....:...:....:. 138M 79/138 57.2% 138/94230402 0.0% 0/138 0.0% 23160857 NA +3463 chr4 + 190214555 29457975 29457974 29458094 120 TTTCTGTCTTGTCTTGTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCT--CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:..x..:.x..:x..x:.....--...::....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.......:..::::...:.:.:.:..:......x... 24M2D94M 73/118 61.9% 118/94230402 0.0% 2/118 1.7% -34239147 -59991255 +3009 chr4 + 190214555 29457984 29457983 29458071 88 TGTCTTGTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTC chr4 + 94230402 57372023 57372022 57372110 57372023 57372022 57372110 88 TGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..x...x......::..x.:...x..:.:...::::::..xx:.x..x.:.........:...::...x....:x:.xx..x.:.:.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% -27914039 -66316363 +3432 chr4 + 190214555 29457986 29457985 29458098 113 TCTTGTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTT chr4 + 94230402 63697123 63697122 63697239 63697123 63697122 63697239 117 TCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x.:.....:xx:x.::.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:...:x.xx.......:...::::..:.:......::.:...x... 59M4I54M 70/113 61.9% 117/94230402 0.0% 4/113 3.5% -34239137 -59991265 +3324 chr4 + 190214555 29457993 29457992 29458102 110 CTTTCTTTCT-TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--------CTTTTTCTTTCTT----TCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..-.......:xx:x..:.:.....:....:.:x..::.:.x....xx.....--------.:...x....:.:----......::..:::::........:.:::.:...x... 10M1I50M8I13M4I37M 74/110 67.3% 123/94230402 0.0% 13/110 11.8% -34239124 -59991278 +3678 chr4 + 190214555 29457997 29457996 29458125 129 CTTTCTTCCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTT---TCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTA-----------CTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x.....:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....---:....x-----------.......x:xx.......:..:::.....::..::......:..x.. 13M1I52M3I6M11D47M 82/118 69.5% 122/94230402 0.0% 15/118 12.7% -34239120 -59991282 +3502 chr4 + 190214555 29458003 29458002 29458175 173 TCCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTC--TTTCTTTCTTTCTTTCTTTTTCTTTCTTT-CTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCT chr4 + 94230402 74371977 74371976 74372158 74371977 74371976 74372158 182 TCTTATTTTTCTGTCTGGCCTTGTTTAATAAAATTTTTTTCAGTATATTCCTTACTTAGTGTATCAATCTTTTCTTTCCTTCTATTTATTTCCTTCCCTTAATTCTCTGTATTCAAGATTCTCATTCCCTTTATTTTTCACTCTTTTCATTCACATGCATATCAGTTTCTCTCTTGATATCT ..:.x.:.....x...xx.:..x...x------...:....--.x.x..:...x...xx.x.x..xx.....-..........x.:.x....:..::...xx..:::.x.x..:xxxx:.:..x...::...x...:..x:.......x..:x:x.x:x.x..xx.:........xx.x... 27M6I8M2I29M1I109M 111/173 64.2% 182/94230402 0.0% 9/173 5.2% -44913974 -49316428 +3654 chr4 + 190214555 29458009 29458008 29458129 121 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT--TTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTT--TCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..:....--...xx.....x::.:xxx.:...x.......x:--.......:.:.::.....::..:....:....:x.. 13M3D36M2I33M2I36M 80/118 67.8% 122/94230402 0.0% 7/118 5.9% -34239108 -59991294 +3540 chr4 + 190214555 29458015 29458014 29458157 143 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCT chr4 + 94230402 6297115 6297114 6297254 6297115 6297114 6297254 140 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTT------TTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCT .....:..---....xx:.......x:...x.x.x....:.x..:..:xx:.:x.......x:x.:.:.x.:.....:.x..x::...:.x....------.....x.x.xx......x:x:.xx:...:......:...x..x.. 8M3I84M6D45M 90/137 65.7% 140/94230402 0.0% 9/137 6.6% 23160900 NA +3506 chr4 + 190214555 29458017 29458016 29458148 132 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTC chr4 + 94230402 37521408 37521407 37521527 37521408 37521407 37521527 120 CTTTGGATCTCATCTTCTGCATTTATCTGATTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTT------------TCTTGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTTCC ....xxx...:x::....x:x...x.:.xx.........x.:....:x.x...:..:...::..::.x:x.x..x...------------....xx.......:....:.:::.:.::.:....:.....:. 78M12D42M 77/120 64.2% 120/94230402 0.0% 12/120 10.0% -8063391 -86167011 +3693 chr4 + 190214555 29458020 29458019 29458152 133 TCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCTT-TCTTTTTCTTTC-------TTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTC chr4 + 94230402 21408808 21408807 21408950 21408808 21408807 21408950 143 TTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCC .:..x:....:..:..x..--........x.:..-............-------..:.:::...:..::..x:xxx:.x..........::........:::...xx....x:.x:xxx...x:..:.:.....x::.:.::. 19M2I13M1I12M7I89M 87/133 65.4% 143/94230402 0.0% 10/133 7.5% 8049212 NA +3489 chr4 + 190214555 29458033 29458032 29458140 108 CTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTT-------CTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTT chr4 + 94230402 34734797 34734796 34734909 34734797 34734796 34734909 113 CTATATTTCTTTATTATAATGATTTTCCTTCTCTCTCTCCT--TTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTTT ..x.x.......x..x:xx.xx.....:....:...:....--...xx...:........::xx..x....-------:...:...:..x.:..:....:.::.x.....x.... 41M2D28M7I37M 75/106 70.8% 113/94230402 0.0% 9/106 8.5% -5276764 -88953638 +3295 chr4 + 190214555 29458056 29458055 29458155 100 TTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTT---CTTTCTC-TTTCTTTTCTTTTTTCTTTCTTT chr4 + 94230402 36195259 36195258 36195362 36195259 36195258 36195362 104 TTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTT ....:...x.x:...:.x....:.xx.xx.x...........x:........:....:..:x..:x....---:..x...-...x:..:.:..x::.::..... 70M3I7M1I23M 69/100 69.0% 104/94230402 0.0% 4/100 4.0% -6737203 -87493199 +3758 chr4 + 190214555 29458060 29458059 29458281 222 TTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTC-----------------TTTCTTTTCTTTCTTTCTTTCCCTTCCATCTTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCTT chr4 + 94230402 67728277 67728276 67728515 67728277 67728276 67728515 239 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTT .....x:..x..:.:....xx:..::..x.......x.x...x.x::.....:...:.::..x:x:.:.....x.x:..:..::.x::.x.::x..x::x...::x..x::..:.::x::....x:::.xx.::..:::..x.:....::x..-----------------::..::..xx:..:..:...::.x....:..:::.:.x.x::x......xx:..::.x.:xx...:... 153M17I69M 119/222 53.6% 239/94230402 0.0% 17/222 7.7% -38270217 -55960185 +3318 chr4 + 190214555 29458067 29458066 29458168 102 CTTTCCTTCTTTCTTTTTCTTTTTC--------TTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTT chr4 + 94230402 36195258 36195257 36195367 36195258 36195257 36195367 110 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTT .........x.x:....:x.:..:.--------..........x.:.......:.......:x...x:...xxx...x:.:x:..x:...::.:x::.:....:.:x:.. 25M8I77M 67/102 65.7% 110/94230402 0.0% 8/102 7.8% -6737191 -87493211 +3374 chr4 + 190214555 29458110 29458109 29458223 114 TTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCT--CTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCT-----TTCTTTCTTTCTCTTTCTCTTTCTTTTCTT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTG-TTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x..:x......x-......:.x......:x.:.x....:.x.x.--.....x::::.:..:...:::..:..:.....x...-----::....x..x:....:..::x.:.:..... 16M1D31M2I36M5I30M 76/113 67.3% 120/94230402 0.0% 8/113 7.1% -53518521 -40711881 +3291 chr4 + 190214555 29458111 29458110 29458164 54 TCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTC chr4 + 94230402 66421027 66421026 66421080 66421027 66421026 66421080 54 TTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTC .:............:....:.x......:.:..x....:x....:.:..:.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -36962916 -57267486 +3735 chr4 + 190214555 29458139 29458138 29458251 113 TTCTTTTTTCTTTCTTTCTCTCTCTCTCT---TTCTTTCTTTCTTTCTCTTTCTTTCTT-TCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCA-----------TCTTTCCTTCA chr4 + 94230402 48874866 48874865 48874993 48874866 48874865 48874993 128 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTTA ....:.:.....:x:x.x.....:.:.x.---.::..x:....:..:.x.:..:.x...-.........x...x.:x...:...:....x:.......x:....:.-----------.......:.:. 29M3I27M1I46M11I11M 80/113 70.8% 128/94230402 0.0% 15/113 13.3% -19416727 -74813675 +4202 chr4 + 190214555 29458149 29458148 29458289 141 TTTCTTTCTCTCT-CTCTCTTTCTTTCTTT----------CTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCATCTTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCT--TTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCAT------TTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .....x....x..-.....:..::...:..----------....:x.x..x..::..::x......x.x..:x.:...x.:.............:xxxx:...:..::..x.------..:...x.:..:.............--.:.x..... 13M1I16M10I72M6D25M2I9M 97/135 71.9% 148/94230402 0.0% 19/135 14.1% -20718118 -73512284 +3131 chr4 + 190214555 29458228 29458227 29458312 85 TCTTTCCCTTCCATCTTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAATACGGAGTC chr4 + 94230402 53984343 53984342 53984427 53984343 53984342 53984427 85 TCTGTCTCTTCCTCCTTCCTTTGTTGAGATCCTTCCTTCTATCTGTTCTTTAATCTGTTTTTTCTTCTTTTTCAAACTCCAAGTC ...x..:.....x:...:.:..xx.xxxx......:....x...x......xx.::x..:...:..:.....:...:x.x:.... 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% -24526115 -69704287 +3187 chr4 + 190214555 29458243 29458242 29458301 59 TTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTA chr4 + 94230402 86518997 86518996 86519055 86518997 86518996 86519055 59 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTA ....:.:.x.:...::...x....xx.:........:...:.........:.x:..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -57060754 -37169648 +3597 chr4 + 190214555 29473705 29473704 29473775 71 CACCTATAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAATCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:..:.:...........:.........x.xx.x...x.:......:....:..x.xx:..:..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -46559502 -47670900 +3453 chr4 + 190214555 29478393 29478392 29478464 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -46554813 -47675589 +3301 chr4 + 190214555 29478527 29478526 29478643 117 AGGAAGAAAGGAGAGGAGAGGGGAGGGGAGGGAAGGGGAGGGGAGGAAGAAAGGGAAATAATGGGAAAGAAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044692 49044691 49044808 49044692 49044691 49044808 117 AGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ..:....x.:.x::x....:.x:xx::.x.:...:....:.:.xx:.......:::..x::..::...x:....:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 117M 67/117 57.3% 117/94230402 0.0% 0/117 0.0% -19566165 -74664237 +4630 chr4 + 190214555 29478530 29478529 29478707 178 AAGAAAGGAGAGGAGAGGGGAG--GGGAGGGAAGGGGAGGGGAGGAAGAAAGGGAAATAATGGGAAAGAAAAGG--AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAATGAAAGGAGGGAAGGAGGGAAGGAGGGAAGGAAGGA chr4 + 94230402 34805279 34805278 34805459 34805279 34805278 34805459 181 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGA-GGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAA ..x:.......:.:.xx.....--....::..x.:...:....::..:...x.x:..x......:x.x:..x.:--...x.x.:..:...:::x:x.:...x:.:.x:.....-.....x..::x.x.::.:..xx:...x:xx..x....:...::..x........:...x.::.:.::. 22M2I50M2I37M1D68M 110/177 62.1% 181/94230402 0.0% 5/177 2.8% -5326749 -88903653 +4126 chr4 + 190214555 29478608 29478607 29478718 111 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAATGAAAGGAGGGAAGGAGGGAAGGAGGGAAGGAAGGAAGGACAGATAA chr4 + 94230402 1500702 1500701 1500812 1500702 1500701 1500812 111 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaa .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:..:...::::..x.:x.x.::.....x:.:........::x:.:.x.:.x.. 111M 67/111 60.4% 111/94230402 0.0% 0/111 0.0% 27977906 NA +3038 chr4 + 190214555 29482839 29482838 29482892 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCAAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x.x........x..:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -46550372 -47680030 +3225 chr4 + 190214555 29504605 29504604 29504721 117 TGTACAAAGTGTGTGTGTGTTTGTAGAGAATCTTCCCCACTCACCTGCTAATTTAATAACATTTTGTAGTAATTTCTGATGTAATGTATATCAATTTTCCATTTTTTGTTTTTCTGT chr4 + 94230402 83205145 83205144 83205258 83205145 83205144 83205258 114 TATACAAGGTGTGTGTGTGTGTGCATAGAATTCTTTTGGCCAAGCTGTGCATGTAATATCTTTTTGTAAAAATACCATCTAGGAAGTCTAACATGTTCTC---TTCTGTTCTTTTGT .:.....:............x..:.x.....::.:::x:.:x.x...:xx..x.....x.x.......:x...x:.xxx.:x:.x..x..x..xx..::.---..:....:..:... 100M3D14M 73/114 64.0% 114/94230402 0.0% 3/114 2.6% -53700540 -40529862 +3279 chr4 + 190214555 29508513 29508512 29508609 97 GAGTCAATAATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATGTGTATATATACACACATATATAT chr4 + 94230402 23247713 23247712 23247806 23247713 23247712 23247806 94 GACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT---TACATGAATAAATATATATAT ..x.::.:x..:.:.:...::.:.:.:..x...:x.:....:........:...........x:x.x.x.x:.---..:..:x.:.x.:........ 73M3D21M 62/94 66.0% 94/94230402 0.0% 3/94 3.2% 6260800 NA +3036 chr4 + 190214555 29508537 29508536 29508576 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 25099455 NA +3066 chr4 + 190214555 29508552 29508551 29508602 51 ATATACACACACACACACACACACACACACACATGTGTATATATACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .....:.:........x.x....:........:...:....:.x..x:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -16632304 -77598098 +3025 chr4 + 190214555 29508784 29508783 29508855 72 GTGCCTGTAGTCCCAGCTGCTTGAGAAGCTGATGCATGAGAATCTCTTGAACCCGGGCGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:......:.....:.:.....xx.x..x...x.x.........:.:x.x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -46524422 -47705980 +3489 chr4 + 190214555 29538133 29538132 29538189 57 ATGTATACATACACACTTACATATATATACATGTGTGCATATATAAAGACAGAGAGA chr4 + 94230402 76376888 76376887 76376944 76376888 76376887 76376944 57 ATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAA ......:......x.x....x.:.:.......:..........x.x...:.....:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -46838755 -47391647 +3393 chr4 + 190214555 29544185 29544184 29544257 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGGAAGAGGATCACTTAAGCTCAGGAGGTTGAAGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........xxxx.x.:.x.....:.:.:...:..x..x::....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -46489020 -47741382 +3065 chr4 + 190214555 29553202 29553201 29553244 43 GCGTGTGTGTGTGTGTGTGTGTTGTGGGGGGGAGGGGCGTGCT chr4 + 94230402 45382118 45382117 45382160 45382118 45382117 45382160 43 GCGTGTGTGTATGTGTGTGTGTGGTGGTGGGGGGGGGAGTTCT ..........:...........x....x....:....x..x.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -15828916 -78401486 +3124 chr4 + 190214555 29616216 29616215 29616285 70 CGTAGTGGCATGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAGTCACTTGAACCTGAGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....--..::.x......:...........::........x.xx:x..:x..........::::.. 8M2D60M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -46416981 -47813421 +3410 chr4 + 190214555 29630023 29630022 29630100 78 AACAGAGCGAGACTCCGTC-TCAAAAACAAAACAAAACAAAACAAAACAAAACAAAAACCAGTGAGTTAAAGGTATAAA chr4 + 94230402 56994514 56994513 56994592 56994514 56994513 56994592 79 aacaaacaaaAACCCCACCACCACCACCAAAACAAAACAAAACAACAAAAAAAAAAGAAGAATGTGTTAAAGGTATAAA ....:.xx:.:..:..::.-:..xx.x..................x.x....x...:.xx.:..x.............. 19M1I59M 58/78 74.4% 79/94230402 0.0% 1/78 1.3% -27364491 -66865911 +3283 chr4 + 190214555 29630244 29630243 29630296 53 TATATATATATACATATGTGTGTGTGTGTGTGTGTATGTGCATGTGTATATAT chr4 + 94230402 55694456 55694455 55694508 55694456 55694455 55694508 53 TATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...::...:.....:........:.....:.x:x:....:.:........... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -26064212 -68166190 +3058 chr4 + 190214555 29642622 29642621 29642679 58 ATATTTGTTTTTTTGTTTTTGTTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTT chr4 + 94230402 50074883 50074882 50074940 50074883 50074882 50074940 58 ATGTTTCTTGTCCTGTACCTGTTTCTCCCTTGTTGTTTTTTTCTTGTTTTTTGTTTTT ..:...x..x.::...x::.....:.:::.....x...x...:............... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -20432261 -73798141 +3216 chr4 + 190214555 29642637 29642636 29642692 56 TTTTTGTTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTGAGACAGAGTCTC chr4 + 94230402 30617007 30617006 30617062 30617007 30617006 30617062 56 TTTTTGTTTTGCTTTTGGTTTGGGTTTTTTGTTTTTTTTTTTTAAATTACAGTCTC ..........x:.....x...xx..............x.....:.:x:.x...... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -974370 -93256032 +3144 chr4 + 190214555 29661227 29661226 29661281 55 CAGGAAAATAACCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 88547308 88547307 88547362 88547308 88547307 88547362 55 CAGAAAACTCCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ...:...x.xx:.................xx........:...:.:.:.:..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -58886081 -35344321 +3420 chr4 + 190214555 29661227 29661226 29661287 61 CAGGAAAATAACCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT chr4 + 94230402 1494995 1494994 1495052 1494995 1494994 1495052 58 CAGGGAAACAG---AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ....:...:.:---.........x.:...............:.:..:...:.....x.... 11M3D47M 48/58 82.8% 58/94230402 0.0% 3/58 5.2% 28166232 NA +3194 chr4 + 190214555 29661241 29661240 29661290 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATG chr4 + 94230402 1495004 1495003 1495053 1495004 1495003 1495053 50 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATG .:.........x.:....x..........:.:..:...:.....x..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 28166237 NA +3298 chr4 + 190214555 29661248 29661247 29661426 179 AAAAAAAAAAATATATATATATATATATATATATATATATATGTGTATATATATATATATATAACAGCAATAACCACATTTCTCCCCA--GGGAATGCAAAACAGAGTACTACATTTTCAATTCACTGCCCTTTCATATCTAACCCACTATCAGTGCCTTCAAATTAACTTAACAAGTATT chr4 + 94230402 58988593 58988592 58988755 58988593 58988592 58988755 163 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTAT-----AGCTATGA-CAAATTTATTCTTACTGTCAATTTAATACA------TGTGTTTTCAACTTA----AATTTGATATACAGCCTGGTGTT--TTCTATTAGATCATATAAACAAGTATT ......:...x............:.:.:..:......x.:....x.xx...x::..x...-----...x..:.-..x....x.:.::.--.xx...x:..x...------.:::.......:.:.----xx...x....x:.:..::x.:.:--.x.:x.:.:..:.xx.x.......... 60M5D8M1D14M2I14M6D15M4D23M2D27M 109/161 67.7% 163/94230402 0.0% 20/161 12.4% -29327345 -64903057 +3037 chr4 + 190214555 29662302 29662301 29662366 65 GAAAAAACAAACAAACAACAACAACAACAACTACAAAAAAAACCATGAACCTAAAGATATATCTT chr4 + 94230402 67484141 67484140 67484205 67484141 67484140 67484205 65 GATAAAACAAACTAACAACGACAACAAAAACCAATAAACAAACCCCAAAAGGAAAGAGATAGCTT ..x.........x......:.......x...:.xx...x.....x::..xxx.....x...x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -37821839 -56408563 +3061 chr4 + 190214555 29662302 29662301 29662347 46 GAAAAAACAAACAAACAACAACAACAACAACTACAAAAAAAACCAT chr4 + 94230402 61993796 61993795 61993841 61993796 61993795 61993841 46 GAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAGCAT ....:..x...x.:..:..............x..........x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -32331494 -61898908 +3379 chr4 + 190214555 29693133 29693132 29693268 136 CTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAATTGTGTTTTTGTTGTTGTTGTTGTTGTTTGTTTTGTTTTGTTTTGTTCTGTTTTGCAACAACCTGGATATTCCAAAATAATCTGCTTATTTTA chr4 + 94230402 63214976 63214975 63215087 63214976 63214975 63215087 112 CTGTGAAACAAAGCAGAAAT---TCTCCAAGTGTCAATAA--------TCTTTGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTT--------TTTTAGGATGATTTGGATTTATCAGA-----CTTTTTATTTCA ...x.x....:....::.x.---....x..:x:xx..x..--------.:.........x.........................--------....:x:.::.::.....x.x:..:.-----..x:......:. 20M3D17M8D37M8D26M5D12M 83/112 74.1% 112/94230402 0.0% 24/112 21.4% -33521843 -60708559 +3102 chr4 + 190214555 29700893 29700892 29700933 41 GAAAGAAAGAAAAACACACACACACACACACACACACACAA chr4 + 94230402 79014292 79014291 79014332 79014292 79014291 79014332 41 GAAAAAAAGAAAAACACACACACACACACACAAAAAAACAA ....:...........................x.x.x.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -49313399 -44917003 +3218 chr4 + 190214555 29717114 29717113 29717183 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:.........:..:........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -46316083 -47914319 +3016 chr4 + 190214555 29863863 29863862 29863911 49 ATACAAACCCTTGGCACGGCTTGGCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44798900 44798899 44798948 44798900 44798899 44798948 49 ATGCAAAACCTTACCCAGTCTTGGCTTTTTTTTTTTTTTTTCTTTCTTT ..:....x....:x.xx.x......................:...:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -14935037 -79295365 +3408 chr4 + 190214555 29869817 29869816 29869910 94 GTTTTCCAGAAAAACAACAGAACTAATATGATAGATATTATATTTATACACAGATACGTATACACACACACATATATATATATACATACATACA chr4 + 94230402 84917798 84917797 84917887 84917798 84917797 84917887 90 GTCTGACAAAAAAACACC----CTAATACACTAAATAAAACATTTATCTACTGACAAAAACACACACACACTGATATATAGATATAGATATACA ..:.xx..:.......x.----......::x..:...xx.:......x:..x..:.x:x.:..........xx.......x...:.x.:..... 18M4D72M 64/90 71.1% 90/94230402 0.0% 4/90 4.4% -55047981 -39182421 +3009 chr4 + 190214555 29878100 29878099 29878159 60 GAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCA chr4 + 94230402 88382714 88382713 88382773 88382714 88382713 88382773 60 GAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCA .........xx.x.........::.:..............:x.x.:..:x.x..x..:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -58504614 -35725788 +3248 chr4 + 190214555 29955855 29955854 29955937 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTAGGAAGCTGAGGTGGGAGAATCACCTGTGCCCATGAAGTTGGGACTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:..........:::.:......x:xx.x...x...:..x:....x:.:x..x..:...:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -46077342 -48153060 +3189 chr4 + 190214555 29955956 29955955 29956076 121 CTGCACTCCAGCCTGGGCAACAGAGTGAGAGCCTACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA-AGAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAAAGACAAAAGGAAA chr4 + 94230402 1317340 1317339 1317461 1317340 1317339 1317461 122 CTTCAGTCCAGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGA ..x..x.....xx::.:x.:.....x.:x.xx.x.x..x.::.x::.:...:.xxxx....x.:x.:..x..-.xx.:..:.....:......:.....:........x..x.....x..:. 72M1I49M 77/121 63.6% 122/94230402 0.0% 1/121 0.8% 28638616 NA +3277 chr4 + 190214555 29955991 29955990 29956072 82 CCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAAAGACAAAAG chr4 + 94230402 45449045 45449044 45449126 45449045 45449044 45449126 82 CCTCAAAAAAAAAAAAAAAAACAAACCCAAAACAGAGATGAGATAAATGAAGTTTAATAAAGAATAAGGGCAAGAATGAAAG .....................x...xxx....x...:.x:.:.x...x:...xxx.:x......x..:.:x..::.::.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% -15493054 -78737348 +3382 chr4 + 190214555 29956681 29956680 29956756 76 GAGAATTAAAATTTATGTGTATATATTTATATAATATATATGTGTATATACATATGCATATGCATACACATACACA chr4 + 94230402 23914539 23914538 23914613 23914539 23914538 23914613 75 GGGAGTGAAAAGTT-TGTATATACATTCATATAAGATAAAGGTGTATGTATGTAAGTAAATGCACACAGATTCACA .:..:.x....x..-...:....:...:......x...x.x......:..::..x.:.x.....:...x..x.... 14M1D61M 56/75 74.7% 75/94230402 0.0% 1/75 1.3% 6042142 NA +3094 chr4 + 190214555 29961514 29961513 29961583 70 CGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:....:--..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -46071683 -48158719 +3036 chr4 + 190214555 29962695 29962694 29962742 48 CACCTGTATCATCCCCACAATCTTTTTTTTTTTTTCTTTTCTTTTTTT chr4 + 94230402 55911609 55911608 55911656 55911609 55911608 55911656 48 CACCTGCTTTATCTTTACAAACTTCTTTTTTTTCTTTTTTCTTTTTTT ......:x.:...:::....x...:........:.:............ 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -25948914 -68281488 +3670 chr4 + 190214555 30008868 30008867 30008940 73 TATATATATATACATATAAATATATATACACACACACATACACATATATGTATATGTGTGTGTATATATATAT chr4 + 94230402 32744959 32744958 32745030 32744959 32744958 32745030 72 TATCTATCTATACATCTACAGA-ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT ...x...x.......x..x.x.-.....x.:...:.........:.x:...::........:.:...:..... 22M1D50M 56/72 77.8% 72/94230402 0.0% 1/72 1.4% -2736091 -91494311 +3157 chr4 + 190214555 30008875 30008874 30008948 74 ATATACATATAAATATATATACACACACACATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT .:.:......xx.:..::.x.....::..:.:.x.x....:.:...x.............::..::::..:x.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 7408677 NA +3123 chr4 + 190214555 30008887 30008886 30008993 107 ATATATATACACACACACATACACATATATGTATATGTGTGTGTATATA----TATATGTGTGTGTATATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATA chr4 + 94230402 21109219 21109218 21109328 21109219 21109218 21109328 110 ATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ..x.....::..x....:....x.:.:..:x....:..:...::x:..:----.:.:.:.:.......:x.....:...:::::.x.xx..:.-:.x.x....x.....:. 49M4I40M1D17M 68/106 64.2% 110/94230402 0.0% 5/106 4.7% 8899668 NA +3476 chr4 + 190214555 30008902 30008901 30009003 102 CACATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTG chr4 + 94230402 5214223 5214222 5214316 5214223 5214222 5214316 94 CACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGT--------ATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...::.:x.:.:.:..:::.x....x..:.:.:.:..x.::....--------...:..x..::.......::::.x.:.........:..::.x....... 45M8D49M 61/94 64.9% 94/94230402 0.0% 8/94 8.5% 24794679 NA +3409 chr4 + 190214555 30008915 30008914 30009026 112 ATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTAT chr4 + 94230402 5214218 5214217 5214321 5214218 5214217 5214321 104 ATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGC--------ATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x::.:.::.x:..:.:.::::.x....x..:.:.:.:..x..:....:..:--------..x..::.......::::.x.:.........:..::.x.......:::.. 54M8D50M 64/104 61.5% 104/94230402 0.0% 8/104 7.7% 24794697 NA +3391 chr4 + 190214555 30008918 30008917 30009053 136 TATATGTGTGTGTATATATATATGTGTGTGTATATATATGT----ATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGT-GTGTATGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCT------GTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....::.......x.x.------...x.:....x.......----.::.:.::x:.....:x....:..:...::x:..::x.x.....:.:...:...:x..:..::..:.:.::x.xx.::-..x.x....x.....:. 17M6D18M4I78M1I17M 83/130 63.8% 135/94230402 0.0% 11/130 8.5% 8899724 NA +3296 chr4 + 190214555 30008940 30008939 30009071 132 TGTGTGTGTATATATATGTA---------TGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTGTGTGTGTGTGTG chr4 + 94230402 5214176 5214175 5214316 5214176 5214175 5214316 141 TGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ..x.x....:x....:x.:.---------..::x.....:x:..:x::.:.::.x:....:.::::.x....x..:::.:.:..x.::....:.::..x..:........::.::x::..:.:.:..::..::x:...... 20M9I112M 74/132 56.1% 141/94230402 0.0% 9/132 6.8% 24794764 NA +3773 chr4 + 190214555 30008944 30008943 30009059 116 TGTGTATATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTG chr4 + 94230402 21109190 21109189 21109297 21109190 21109189 21109297 108 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATA--------TGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:x....:..:...:.x.x....x.:....x....--------....:x:.:..:.::x:.....:x....:..:...::x:..::x.x.....:.......:..x....:::.. 36M8D72M 71/108 65.7% 108/94230402 0.0% 8/108 7.4% 8899754 NA +3179 chr4 + 190214555 30008964 30008963 30009031 68 TGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...::.:::..x..:.:...x.:....:...:......:....:..x...:..::.x.:.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -56624960 -37605442 +3299 chr4 + 190214555 30008982 30008981 30009049 68 TGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...::.:::..x..:.:...x.:....:...:...........::.x...:..:..x...:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -56624942 -37605460 +3238 chr4 + 190214555 30008997 30008996 30009063 67 ATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx.:....:.:x..x::x..x......:..................::..::.:.:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 2683506 NA +3951 chr4 + 190214555 30038001 30038000 30038083 83 CATGGTGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......::.--......:...........::........x.xx:x...x.............:..x:xx:..:...:. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -45995196 -48235206 +3150 chr4 + 190214555 30038119 30038118 30038203 85 GCGACCGAGCGACACTCTGTCTCAAAAA--AAAAAAAAAAAGAAAAGAAAAGAAAGATGATAAACAGTCTGCTCCCAGAGACAGGCA chr4 + 94230402 88382708 88382707 88382794 88382708 88382707 88382794 87 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACAGCTCCCAGGGGCTGACA ..:.xx....:.x..xx:x.........--.:.........:.....x.x....:x.::....x..xx.x........:.:.x.:.. 28M2I57M 60/85 70.6% 87/94230402 0.0% 2/85 2.4% -58344589 -35885813 +3128 chr4 + 190214555 30045000 30044999 30045141 142 ATTTGTGAGACTGAA-AAGCCATTATTTGTATGCTTGTTGTTCACGTTATCTATTTC--TTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTATTTTTTTTGAGATGGAGT chr4 + 94230402 86491007 86491006 86491153 86491007 86491006 86491153 147 ATTTGAGAAAGAAAACAATCCATT--TTGTTTCCAAGATGTTGAAACAATATGTTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCTGGCTGAAAT .....x..:.xx:..-..x.....--....x.x.xx.x....x.x::x..x.:....--..:...:...:...:....----..:.::..:.x.x..:.:.........:...:.::.::.:::..:.x.x...:::.:x:.x..:.:. 15M1I8M2D31M2I19M4I67M 89/140 63.6% 147/94230402 0.0% 9/140 6.4% -56446007 -37784395 +3008 chr4 + 190214555 30058787 30058786 30058849 63 CTCAAAAAAAAAAAACAAAAAAAAAAACCCTTTAAAATACACACACACACACACACACAAACA chr4 + 94230402 30589513 30589512 30589575 30589513 30589512 30589575 63 CCCAAAAAAAAGAAAGAAAAAAAAAATCCTTATGCTTTACACATGTGCATACACGCACACATA .:.........:...x..........x..:.x.:xxx......::::..:....:....x.:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -530726 -93699676 +3003 chr4 + 190214555 30058806 30058805 30058897 92 AAAAAAAACCCTTTAAAATACACACACACACACACACACAAACACACAAACACACACACACACAAATTCAATGCTTTATTTGTAATGGTTGT chr4 + 94230402 43671835 43671834 43671926 43671835 43671834 43671926 92 AAAAAAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCACTAAAGAAAGCAAAGTTTTTTAAATGGTAATTGT .........::..:xxx:.x:.:...:::.:.....::..x.............::...xx.x:..xx...x.:...x.xx:.::.::.... 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% -13613029 -80617373 +3354 chr4 + 190214555 30063060 30063059 30063143 84 GTAAGTAAAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112169 41112168 41112252 41112169 41112168 41112252 84 GTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..:..:x:x.......:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% -11049109 -83181293 +3087 chr4 + 190214555 30063063 30063062 30063148 86 AGTAAAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112168 41112167 41112253 41112168 41112167 41112253 86 AGTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG ...:.:xx.x.:...:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% -11049105 -83181297 +3087 chr4 + 190214555 30063085 30063084 30063162 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x......x:.::...:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -11049093 -83181309 +3056 chr4 + 190214555 30063100 30063099 30063255 156 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAA---AGAAAAGAGAAAAAAAG chr4 + 94230402 33877425 33877424 33877583 33877425 33877424 33877583 159 AAGTAAAAAAAAAAAAAAGGAATAACAATTGAAACTAACAGAAGAAAATGAATTAGGAAATATTGATAACAACATAAATAACAAAAATACCAAGGAAGAAGACAAACAGTGCAAAGGCAGGAGGGAGAAATGGAAAAAATCCAGAAAGGAAATTTAAAG ...x..:...:...:....:..x..x:.xx....xx..x.:.::..:.x::.xx::..:.x.xx..x..x:.x.x...x..x:...:x.xx..:...::.:.x...x.:x.x..:::x:::..::.....x.:......---.....:..:.xxx.... 139M3I17M 91/156 58.3% 159/94230402 0.0% 3/156 1.9% -3814325 -90416077 +3291 chr4 + 190214555 30063108 30063107 30063260 153 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAAAT chr4 + 94230402 33877425 33877424 33877577 33877425 33877424 33877577 153 AAGTAAAAAAAAAAAAAAGGAATAACAATTGAAACTAACAGAAGAAAATGAATTAGGAAATATTGATAACAACATAAATAACAAAAATACCAAGGAAGAAGACAAACAGTGCAAAGGCAGGAGGGAGAAATGGAAAAAATCCAGAAAGGAAAT ...x..:...:...:....:..x..x:.xx....xx..x...::..:.x::.xx.:..:.x.xx:.x..x:.x.x...x..x:...:x.xx..:...::.:.x...x.:x.x..:::x:::.:.:.:...x:.....:.xxx.:......... 153M 88/153 57.5% 153/94230402 0.0% 0/153 0.0% -3814317 -90416085 +3134 chr4 + 190214555 30063129 30063128 30063225 97 AGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ........:--...xx.x.....:.............:.x....:xxx....--::..x.:..x.x:..::.x:...:.:...:..:....:::..::. 9M2D41M2I45M 64/95 67.4% 97/94230402 0.0% 4/95 4.2% -21085250 -73145152 +3300 chr4 + 190214555 30063137 30063136 30063233 97 AGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ........::..xx.x.........:...........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....:::.:.:. 97M 60/97 61.9% 97/94230402 0.0% 0/97 0.0% -21085242 -73145160 +3104 chr4 + 190214555 30063141 30063140 30063240 100 AGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG .......:::.:xx.x.....:.....:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:......:.:::.x.. 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% -21085238 -73145164 +3071 chr4 + 190214555 30063169 30063168 30063253 85 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAA chr4 + 94230402 52659767 52659766 52659851 52659767 52659766 52659851 85 AGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAAA ............xxx.:....:::...x:::xx.x:x:..xx...............:....:.:x.:..:..x..x.:.x.... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% -22596598 -71633804 +3225 chr4 + 190214555 30063183 30063182 30063249 67 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAA chr4 + 94230402 71715059 71715058 71715125 71715059 71715058 71715125 67 AAAGTTAGGCAGGAAGAGAGAGAGAAGGAAAGTTTAAAACAAACAAAAGCAACAAAAGAAAAAAGAA ....xx..:x..:....:...:....:.....xxx:...x...x.....x..x.........:.... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -41651876 -52578526 +3151 chr4 + 190214555 30073814 30073813 30073908 95 TATATACATATATATATATGTATATATATATATGTATATATATATGTATATATATATGTATATATATATGTGTATATATATATATGTATATATAT chr4 + 94230402 29286186 29286185 29286279 29286186 29286185 29286279 94 TATAT-CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT .....-......:...:.:.:.x.x::.....::x...x.x.x..::.xx:x:.:.x:......:....x.....x...x....:....x...:. 5M1D89M 63/94 67.0% 94/94230402 0.0% 1/94 1.1% 787628 NA +3015 chr4 + 190214555 30073817 30073816 30073908 92 ATACATATATATATATGTATATATATATATGTATATATATATGTATATATATATGTATATATATATGTGTATATATATATATGTATATATAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ...:.x...x....:.......x..x..::x.xx...:..:..:.x.:x:x:...::...:.x:x.....:.:.:.:.....:.:.x..x.. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% -59739152 -34491250 +3405 chr4 + 190214555 30073848 30073847 30073939 92 TATATATATATGTATATATATATGTATATATATATGTGTATATATATATATGTATATATATATATATGTATATACATACACACACACCCAGG chr4 + 94230402 85834533 85834532 85834622 85834533 85834532 85834622 90 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG--CACACATACACACATGGCCTGG ...x:..x.:...x.:.:.:.:...:.:.:...xx:....x::...:.......x...:..:.x....--:.:...........::x..x.. 68M2D22M 61/90 67.8% 90/94230402 0.0% 2/90 2.2% -55760685 -38469717 +3213 chr4 + 190214555 30073880 30073879 30073931 52 TATGTGTATATATATATATGTATATATATATATATGTATATACATACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .......:.::...:.....x..:.:.:.....x...x..:........... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -14741720 -79488682 +3737 chr4 + 190214555 30080672 30080671 30080775 104 CATATATATATATACATACACATATATACATATGTATACACACATACACACACGTAGGTACCTATAATTAAAATAGCTTATTTACATATATTTATATATGAAAT chr4 + 94230402 23247721 23247720 23247811 23247721 23247720 23247811 91 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGG-------------AAAAAAGTTACATGAATAAATATATATATGAAAT ...:.:.:...::...:...:x...:x.........:.....:.:........:x:.-------------...x.:x...:x.:x...x..x............ 57M13D34M 66/91 72.5% 91/94230402 0.0% 13/91 14.3% 6832951 NA +3623 chr4 + 190214555 30095706 30095705 30095771 66 GTGGTGGGCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x....:.::..........::........x.xx.x...x.............:.. 6M2D58M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% -45937495 -48292907 +3553 chr4 + 190214555 30114438 30114437 30114510 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -45918767 -48311635 +3204 chr4 + 190214555 30114597 30114596 30114665 69 TTTTATTTTTTCTTCTTCTTCTTTTCTTTCTTTCTTCCTTTTCTTTTTTTTTCTTTTTTTCTTTTTTTT chr4 + 94230402 53757789 53757788 53757857 53757789 53757788 53757857 69 TTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ..::..:....::x.:....xxx.:.:::.:::.::..::.:.........:................. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -23643192 -70587210 +3316 chr4 + 190214555 30119712 30119711 30119772 61 GTGTCCCTGTAATCCCAACTACTTAAGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:x.x....:.:...:......:.:........x.xx.x...x.........:...:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -45913492 -48316910 +3644 chr4 + 190214555 30159552 30159551 30159625 74 GTGCACCTGTAGCCCCAGCTACTTGGGAGAATGAGGCAGGAGAATTGCTTGAACCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.....::...........::..:x....x.xx.x...x::...........:..x:.x:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -45873652 -48356750 +3416 chr4 + 190214555 30162444 30162443 30162531 88 TTTTTCAAAATAACGGGAAAAAGAATTTACAGATGCCAAAACAAACAAACAAACAAACAAAAAACCCAAAAAATTTAGACCAGAAATT chr4 + 94230402 27857803 27857802 27857878 27857803 27857802 27857878 76 TTTTTCAGAAT---GGCAAAAGGAAT-----GA----AAAACAAACAAACAAACAAAGAAAAAAAACATACACTTTAAAGCAGAAATT .......:...---..x....:....-----..----....................x......xx..x.x.x....:.x........ 11M3D12M5D2M4D51M 65/76 85.5% 76/94230402 0.0% 12/76 15.8% 2304641 NA +3081 chr4 + 190214555 30162481 30162480 30162531 51 AAAACAAACAAACAAACAAACAAAAAACCCAAAAAATTTAGACCAGAAATT chr4 + 94230402 27015665 27015664 27015713 27015665 27015664 27015713 49 AAAACAAACAAACAAACAAAAAAAAAACCCAACAGATTTTAA--GGAAATT ....................x...........x.:....x:.--:...... 42M2D7M 43/49 87.8% 49/94230402 0.0% 2/49 4.1% 3146816 NA +3242 chr4 + 190214555 30183655 30183654 30183789 135 TGGGAGGCAGAGGTTGCAGTGAGCCAAGATCAAGCCAGAGTGAGACTCCATCAAAGAAAAAAAAGGGAAAGAAAGAAAGACCGACAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAA chr4 + 94230402 2498526 2498525 2498657 2498526 2498525 2498657 132 TGGGGAGTGGTGATGGCAGCAAGCGCAGG---AGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ....::.::.x.:.x....::...xx..:---..x.:.:.x.x:.:xxxxx.x:...x..:::...::..:x:::.:...:.xx..:.::.......:...:::...:.....x...:x.........x:.::.. 29M3D103M 76/132 57.6% 132/94230402 0.0% 3/132 2.3% 27685129 NA +3359 chr4 + 190214555 30183766 30183765 30183847 82 AGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:...:.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:..x.:. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% -10928412 -83301990 +3425 chr4 + 190214555 30183774 30183773 30183862 89 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGATCTTTTT chr4 + 94230402 41112178 41112177 41112266 41112178 41112177 41112266 89 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATATTCCT ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x....:.:..x.:..x..::. 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% -10928404 -83301998 +3047 chr4 + 190214555 30183778 30183777 30183856 79 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAT chr4 + 94230402 41112178 41112177 41112256 41112178 41112177 41112256 79 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGAT ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:::..x....:.:... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -10928400 -83302002 +3057 chr4 + 190214555 30185011 30185010 30185089 79 CTTCTTCCTTTTTTTTTTTTTTCAGTTTACTCAAAAGGTGAACAAAATTTTTTACTATCTCATCTTAATACAACACAAA chr4 + 94230402 89555827 89555826 89555905 89555827 89555826 89555905 79 CTTCTTCTTTTTTTTTTTTTTTTAGTTTTCTAGAAAATGGGACAAGAAACTTTCTGATCCTTCCTTTCTAAAATGTAAA .......:..............:.....x..x:...:xx.:....:.xx:...x:x...::x:...xx..x..:::... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -59370816 -34859586 +3106 chr4 + 190214555 30220685 30220684 30220745 61 TGTGTGTGTGTGTGTGTGTGTGTAGACATATATATATATATATATCAGTACGTGTACATAC chr4 + 94230402 85834541 85834540 85834601 85834541 85834540 85834601 61 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGC .....x..................xxx..:..x::...:....:.x.:...:...x:..:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -55613856 -38616546 +3168 chr4 + 190214555 30220690 30220689 30220740 51 GTGTGTGTGTGTGTGTGTAGACATATATATATATATATATCAGTACGTGTA chr4 + 94230402 6083173 6083172 6083223 6083173 6083172 6083223 51 GTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTA .............:.::..x...x.:..............:xx...:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 24137517 NA +3024 chr4 + 190214555 30303528 30303527 30303602 75 GGGGCACCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x......:.:.......:.::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -45729675 -48500727 +3588 chr4 + 190214555 30316111 30316110 30316275 165 AAAAGAAAAAAAAGAAGAAAGAAAGAGAAAAGAAAGAG--AGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGACAGGAAGGAAGGGAGCAAGGAAGGAAGGAAGG-GAGGAAGGAAGGAAGGATAAAGGAAGGAAGGAAGGAGAA----GAGAGAAAGAAAAAGAAAGAAGA chr4 + 94230402 49044652 49044651 49044813 49044652 49044651 49044813 162 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTT----AAAGAAAGAAGAAAGGTGAAAAATGAAAG------AAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ......xx...:....:.:.:x......xx..:::x:.--.......x.::x..x:...::x.xx:..x....x...:.:..:xx----..:...:....:....-..::..x...:.------...:...:...x....x....----....xx.:...:.:.:..:.x.. 38M2I45M4D16M1I12M6D21M4I23M 103/155 66.5% 162/94230402 0.0% 17/155 11.0% -18728541 -75501861 +3435 chr4 + 190214555 30316145 30316144 30316248 104 AGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGACAGGAA---------GGAAGGGAGCAAGGAAGGAAGGAAGGGAGGAAGG--AAGGAAGGATA-------AAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148500 51148379 51148378 51148500 122 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGG ...:....::.:xx.x...:...........:...:....:.:---------.:..x...:..x...:..x::..::::.::....--.....:...:.-------:.:.x.x......... 43M9I34M2I11M7I16M 72/104 69.2% 122/94230402 0.0% 18/104 17.3% -20832234 -73398168 +3546 chr4 + 190214555 30316184 30316183 30316319 136 GGAAGGAAGGGAGCAAGGAAGGAAG----------------GAAGGGAGGAA----GGAAGGAAGGATAAA--------GGAAGGAAGGAAGGAGAAGAGAGAAAGAAAAAGAAAGAAGAAAGAAGAAAGAAAGAAAGACAGGAAGGAG----GAAAGGGAGGAGAAG chr4 + 94230402 32265491 32265490 32265658 32265491 32265490 32265658 168 GGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAG ..:.x.x........x...::.:..----------------..:...:...:----..:.:.:..:..:x.--------.........:..:....:.....:.:::::.:.:......:..:.x:.x...:.:.x..::x:.x..xx.----....x:...:.:... 25M16I11M4I15M8I70M4I15M 90/136 66.2% 168/94230402 0.0% 32/136 23.5% -1949307 -92281095 +3187 chr4 + 190214555 30316254 30316253 30316326 73 AGAGAAAGAAAAAGAAAGAAGAAAGAAGAAAGAAAGAAAGACAGGAAGGAGGAAAGGGAGGAGAAGAGAGAAA chr4 + 94230402 75176447 75176446 75176519 75176447 75176446 75176519 73 AGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA .......:......:.:....x..:..xx......:.:..:x.x....:.:xx..x.::...x...::..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -44860193 -49370209 +3112 chr4 + 190214555 30316276 30316275 30316332 57 AAGAAGAAAGAAAGAAAGACAGGAAGGAGGAAAGGGAGGAGAAGAGAGAAAGAAAAA chr4 + 94230402 40414739 40414738 40414795 40414739 40414738 40414795 57 AAAATTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAAAA ..:.xx....:..:...:.x:..::..:......::.....::.....:........ 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -10098463 -84131939 +3296 chr4 + 190214555 30333274 30333273 30333371 98 TAAGCTAATACTTAATAAACTCCCATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGTGTGTGT chr4 + 94230402 39937152 39937151 39937249 39937152 39937151 39937249 98 TAACCTGATAATTTGGGTTTTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ...x..:...x..x:x:xx:.x.:..............::...x......:xxxx.x..:.:..xxx:..:.....::.......:...x:....::. 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% -9603878 -84626524 +4608 chr4 + 190214555 30333290 30333289 30333412 123 AAACTCCCATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGTGTGTGTATATATATATGTATGTGTATATATGTATGTATGTGTATATA chr4 + 94230402 21109185 21109184 21109299 21109185 21109184 21109299 115 AAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATG--------TACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA ...:.:x.x....:........x.x....x.:..:xx.....:...x.......:.x.:....:x....::....--------..:x:..::x.x.........:......x..:..:..::. 75M8D40M 81/115 70.4% 115/94230402 0.0% 8/115 7.0% 9224105 NA +3539 chr4 + 190214555 30333295 30333294 30333406 112 CCCATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGTGTGTGTATATATATATGTATGTGTATATATGTATGTATGTG chr4 + 94230402 21109192 21109191 21109303 21109192 21109191 21109303 112 CTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .::...:..:.....x.x....x.:..:.xx:...:..:x....:...:x.:::.::x....::...:.::x::..:x.x.:.:...:.:...:.:x.....:...:.:::. 112M 65/112 58.0% 112/94230402 0.0% 0/112 0.0% 9224103 NA +3378 chr4 + 190214555 30333298 30333297 30333434 137 ATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGTGTGTGTATATATATATGTAT------GTGTATATATGTATGTATGTGTATATATGTACTCACTTAAAATATACAG chr4 + 94230402 85834534 85834533 85834665 85834534 85834533 85834665 132 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAAT------GTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT-----TCCACTTGAATTCTAAAG ..x:..x.....x..............x....xx..------:..x...:.::...:..x...:....x.:..:.:.:...:.:::..------.x.x..x.x:x.x.......::.x..-----::.....:..x.x..x.. 36M6D46M6I26M5D18M 86/126 68.3% 132/94230402 0.0% 17/126 13.5% -55501236 -38729166 +3172 chr4 + 190214555 30333298 30333297 30333369 72 ATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGTGTGT chr4 + 94230402 39937178 39937177 39937249 39937178 39937177 39937249 72 ATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ......:.....::...x......::x:x.x..:....xxx....::..:.::......:...x.....::. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -9603880 -84626522 +3644 chr4 + 190214555 30333303 30333302 30333405 103 TATGTGTGTGTGTGTGTGTGTGA--GTATATATACACACATATGCACATGTATATATATATATGT-----GTGTGTATATATATATGTAT-------------GTGTATATATGTATGTATGT chr4 + 94230402 79265520 79265519 79265642 79265520 79265519 79265642 123 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGT .:..........::........:--.......:.:....:.:......:.:.x.:....x.:...-----::::x.x......x...:.:-------------.....:.x...:..x.x... 23M2I40M5I20M13I20M 75/103 72.8% 123/94230402 0.0% 20/103 19.4% -48932217 -45298185 +3317 chr4 + 190214555 30333334 30333333 30333406 73 ACACACATATGCACATGTATATATATATATGTGTGTGTATATATATATGTATGTGTATAT--ATGTATGTATGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ..........x......:.x.:.:..::..:::x:x:...:.....x...:.........--...:.:...x... 60M2I13M 53/73 72.6% 75/94230402 0.0% 2/73 2.7% 7733136 NA +3549 chr4 + 190214555 30333374 30333373 30333443 70 ATATATATGTATGTGTATAT---ATGTATGTATGTGTATATATGTACTCACTTAAAATATACAGAAATAAATA chr4 + 94230402 90611483 90611482 90611555 90611483 90611482 90611555 73 ATATAAATGTATTTGTGTCTTGAATGCTCCCATGTGTATACATGTACTCACACAAAATATACACAAATACATA .....x......x...:.x.---...:x:x:.........:..........x:..........x.....x... 20M3I50M 56/70 80.0% 73/94230402 0.0% 3/70 4.3% -60278109 -33952293 +3039 chr4 + 190214555 30346116 30346115 30346162 47 GTCTCAAAAACAAACAAACAAACAAACAAACAAAAAACTTCTGATAG chr4 + 94230402 90037254 90037253 90037300 90037254 90037253 90037300 47 GTGCCAAAAAAAAACAACCAAACAAACAAACAAAAAATGTCTAACAG ..x:......x......x...................:x...:.:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -59691138 -34539264 +3045 chr4 + 190214555 30360205 30360204 30360253 49 ATTTCTCAGAGATTTTATTATTCTTTTCTATTTTTTTTTTTTTTTTTGC chr4 + 94230402 6689347 6689346 6689395 6689347 6689346 6689395 49 ACTCCTAATAGATTTTATTATTGCTTTTAATTCTTTTTTTTTTTTTTGC .:.:..x.x.............x:...:x...:................ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 23670858 NA +3127 chr4 + 190214555 30375681 30375680 30375756 76 TTTTCTTTTCTTTTCTTTTCTTT--TCTTTTCTTTTCTTTT---CTTTTCTTTTCTTTTCTTTTCTTTCCTTTTCTTTTTG chr4 + 94230402 89201233 89201232 89201313 89201233 89201232 89201313 81 TTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTG ..........:...:...:....--x..x.x........x.---.:.:...::::....:.....x.x..:..:...::.. 23M2I16M3I37M 56/76 73.7% 81/94230402 0.0% 5/76 6.6% -58825552 -35404850 +3368 chr4 + 190214555 30386857 30386856 30386911 55 CTGAAACCGAGGTTTCAGTAGGGTTGGTTTCTATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 77204306 77204305 77204360 77204306 77204305 77204360 55 CTGAAGATGTGGTTTCAGTATGAGAGGTTGCTATTTTTTTCTTTTTTTTTTTTTT .....:x:.x..........x.:xx....x..........:.............. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -46817449 -47412953 +3000 chr4 + 190214555 30395553 30395552 30395612 60 TGTGCCTGTAATCCCAGCTACTCCAGAGGCTGAAGCAAGAGAATCCCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x....:.:.........:x.:.......:x.xx.x...x.x...........:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -45637652 -48592750 +3247 chr4 + 190214555 30420707 30420706 30420770 64 CTTGGATAAACATTAAAAGCAGATGTTTCTTTTTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 29622860 29622859 29622923 29622860 29622859 29622923 64 CTGAAATAAAAGTGAAAACCAAATGTCTTTTTTCTCTTTTTTTCCCCTTTTTTTCGTTCTTTTT ..x::.....x:.x....x..:....:.:....:........:.:::.......:x..:..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 797847 NA +3118 chr4 + 190214555 30427045 30427044 30427086 42 CATCTCAAACAAACAAACAAAACAAAACAAAACAAAACAAAA chr4 + 94230402 40119101 40119100 40119142 40119101 40119100 40119142 42 CACTTCAAACAAACAAACAAAAAAAAACAACACAAAACAAGA ..::..................x.......x.........:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -9692056 -84538346 +3411 chr4 + 190214555 30430414 30430413 30430484 71 ACTAATTATTTTTTAGTTTTGTTGGTTTTTTTTTTTTTTTTTTGCTTTGTGGGATTTAAAACTTGGATAAA chr4 + 94230402 54265999 54265998 54266068 54265999 54265998 54266068 70 ACCAATTATCTCCCAGTTTTTTTGGCTTTTTTTTTTTTTTTTTGTTATCTGTG-TATCAAGTTTAGATGAA ..:......:.:::......x....:..................:.x.x..x.-.x.x..::..:...:.. 53M1D17M 53/70 75.7% 70/94230402 0.0% 1/70 1.4% -23835585 -70394817 +3659 chr4 + 190214555 30482181 30482180 30482265 85 TGTAATCCCAGCTACTTGGGAGGCTGAGACAGGCGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.:...........::........x.xx.:...x...........:.:..x:xx:..:..:..------..x..x...... 67M6D12M 59/79 74.7% 79/94230402 0.0% 6/79 7.6% -45551030 -48679372 +3399 chr4 + 190214555 30492731 30492730 30492821 91 TGCACCTGTAATCCCAGCTACTGAGGAGGCTGGGGCAGGAGAATCGCTTGAACCTGGGAGCCGGAGGTTGCAGTGAGCCAATATCGTGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x....:.:.........x:::......:.x.xx.x...x.:........::.:...:xx:..:..:..------..:..x:..... 73M6D12M 59/85 69.4% 85/94230402 0.0% 6/85 7.1% -45540474 -48689928 +3295 chr4 + 190214555 30494289 30494288 30494375 87 GTCTGCAATTTCAAATTTATCACTGATAAATATGCAAGAATTACTGGTATATATATATATATATATATACACACATATACAGACACA chr4 + 94230402 74671033 74671032 74671117 74671033 74671032 74671117 85 gtccaccagtgtgaacccaccac--aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ...::.x.x.x::..:::.:...--.x:.....:...:.....x:x.................:.:.:.......:.x.x.:.x.:. 23M2D62M 58/85 68.2% 85/94230402 0.0% 2/85 2.4% -44176744 -50053658 +3075 chr4 + 190214555 30494324 30494323 30494384 61 AAGAATTACTGGTATATATATATATATATATATACACACATATACAGACACACACACGTAG chr4 + 94230402 61270768 61270767 61270828 61270768 61270767 61270828 61 AACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAG ..x..::.:x::.....x.:.......:.......:...:..:........x..::::... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -30776444 -63453958 +3576 chr4 + 190214555 30547093 30547092 30547234 142 ACCATCTCTGAGGAAGCAGGGCCTCAGTAGATACCAAATCTGCC-----AGCGCCTTGAT-CTTGGACTTCTCAGCTTC-------------CAGAATTATGAGAAATACATTTCTTTTTTTTTTTTTTTTTTTTTTTGTAAGCTACTTGGCTGATGTTAT chr4 + 94230402 39741228 39741227 39741388 39741228 39741227 39741388 161 ACAGTTCCTGGGGTGGTGGAACCTCAGCTGGCACCAAGGTTTTCTCAGGAGGACCCTGATTCTTGAACTGAAGAGCCCCAGAGCAAGGACTACTGACTAGTGAGTACTAAAGCTCTTTTTTTTTTTTTTTTTCTTTTGGTTGCCTGCCTGTCAGATGTCAT ..x:.::...:..x:.::.::......:x.::.....:x:.x:.-----..x:..:....-....:...xxxx...::.-------------.x..x.x:....x.x..x.x:...................:....x..x:x..:.:..x.x.....:.. 44M5I11M1I18M13I69M 93/142 65.5% 161/94230402 0.0% 19/142 13.4% -9194135 -85036267 +3220 chr4 + 190214555 30600169 30600168 30600260 92 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTGTTTTAGAAAATTCGGATTTATGAAGTTTTCATTTTTGTTTG-----TTTAAATGTTATGCTTT chr4 + 94230402 38514364 38514363 38514460 38514364 38514363 38514460 97 AAGAAAAGAGGAAAAAAAGAAAAATGAAATACTGTCTTAAAAAACCCAAACTTAAAAACTTTCAATATTTACTTTACTACCTTAATTGTAAGGCTTT ..:....:.::.......:.....x:...xx:...:...:....::.::.:...x:..x...:x..x...::..x-----:....x...x.x..... 75M5I17M 62/92 67.4% 97/94230402 0.0% 5/92 5.4% -7914195 -86316207 +3749 chr4 + 190214555 30630095 30630094 30630175 81 CAGTGGCACATGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGTGAGAATCGCTTGAACCAGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::..:.--.:....:...........::........x:x..x...x.:........x:.:..x.xx:.....:.. 12M2D67M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% -45403104 -48827298 +3608 chr4 + 190214555 30695566 30695565 30695655 90 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGATGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:...........::........x.xx.x...x.:........::.:..x.xx:x.:..:..------..x..x...... 72M6D12M 62/84 73.8% 84/94230402 0.0% 6/84 7.1% -45337640 -48892762 +6429 chr4 + 190214555 30721616 30721615 30722835 1220 CTTTCAGCCTGGAGTCCGGTTCCGA------GTACCTGAAGATCGACAACCTCACTGGCGAGCTGAGCACGAGCGAGCGGCGCATCGACCGCGAGAAGCTGCCCCAGTGTCAGATGATCTTCGACGAGAACGAGTGCTTCCTGGACTTCGAGGTGTCGGTGATCGGGCCCTCGCAGAGCTGGGTGGACCTGTTTGAGGGTCAGGTCATCGTGCTTGACATCAACGACAACACGCCCACCTTCCCGTCGCCCGTGCTCACGCTCACGGTGGAGGAGAATCGGCCGGTGGGCACACTTTACCTGCTGCCCACAGCCACCGACCGCGACTTCGGCCGCAACGGCATCGAGCGCTACGAGCTGCTCCAGGAGCCCGGAGGCGGCGGCAGCGGCGGCGAGAGCCGGCGCGCCGGGGCGGCCGACAGCGCCCCCTACCCCGGGGGCGGCGGGAACGGCGCGAGCGGCGGCGGCTCGGGAGGCTCCAAGCGGCGGCTGGACGCATCAGAGGGCGGCGGCGGCACCAACCCCGGCGGCCGCAGCAGCGTGTTCGAGCTGCAGGTGGCGGACA---CCCCGGACGGCGAGAAGCAGCCG-----CAGCTGATCGTGAAGGGGGCGCTGGACCGCGAGCAGCGCGACTCCTACGAGCTGACCCTGCGAGTGCGCGACGGCGGCGACCCGCCTCGCTCCTCGCAGGCCATCCTACGGGTCCTCATCACCGACGTGAACGACAACAGCCCCCGCTTCGAGAAGAGCGTGTACGAGGCCGACTTGGCTGAGAACAGCGCCCCGGGGACCCCCATCCTGCAACTGCGCGCAGCCGACTTGGACGTGGGGGTCAACGGGCAGATCGAATACGTGTTCGGGGCGGCCA---------CCGAGTCGGTGAG----GCGGCTGCTGCGCCTTG-ACGAGACGTCCGGCTGGCTCAGCGTCCTGCACCGGATCGACCGCGAGGAG------GTGAACCAGCTGCGC-TTCACGGTCATGGCCCGCGACCGCGGGCAGCCCCCCAAGACCGACAAG-GCCACCGTGGTCCTTAACATCAAAGACGAGAACGACAACGTGCCGTCCATTGAAATCCGCAAGATTGGGCGCATCCCCCTCAAGGACGGGGTGGCCAACGTGGCCG---AGGACGTTCTGGTCGACACCCCCATCGCTCTGGTGCAGGTGTCCGACCGAGACCAAGGCGAGAACGGGGTGGTCACCTGCACCGTGGT---GGGCGACGTGCCCTTCCAGCTCAAG chr4 + 94230402 27987430 27987429 27988441 27987430 27987429 27988441 1012 CTTCCAGAC-GGCGTCCAATTCCCGCAGCCCTTACCTGGAGCTCAACCTGGAGACCGGGGTGCTCTACGTGAACGAGAAG---ATCGACCGCGAGCAGATCTGCAAG---CAGAGCCCCTCC------------TGCCTGCTGCACCTGGAGGTCTT------------CCTGGAGAACCCCCTCGAGCTGTTCCGGGTGGAGATCGAGGTGCTGGACATCAACGACAACCCACCCTCCTTCCCCGAGCCCGACCTCACCGTGGAGATCTCGGAGAGCGCCACGCCGGGCACCCGCTTCCCCCTGGAGAGCGCCTTCGACCCCGACGTGGGCACCAAC--------TCTCTGCGCAC-------------------------------CTACGAGATC------------ACTCCCAACAGCTACTTCT-------------------------------------------------CACTCGACGTGCAGACGC-----AGGGCGACG---------------------GCAACCGCTTCGCCGAACT---GGTGCTGGACAAGCCGCTGGACCGCGAGCAGCAGGCGGTGCACCGCTA--CGTGCTGACCGCGGTGGACGGCGGACAGC------------------CCCAGCA---GCGCACCGGCA-----CCGCCCTGCTC-------ACCATC---AGGGTGCTGGACTCC------AACGACAACGTCCCCGCCTTCGAGCAGCCCGTCTACACCGTGTCGCTGCCAGAGAACTCGCCGCCGGGCACGCTGGTGCTGCAGCTCAACGCCAGCGACCCCGACGAGGGGCAGAACGGCGAGGTCATCTACTCCTTC--AGCAGCCACATCTCGGCCCGCGCCCGGGAGCTCTTCGGC-ATCGCGCCGCGCACCGGGCGCCTGG--AGGTGAGCGGCGAGC------TGGACTACGAGGAGAGCAGCGTGTACCAGGTGTACGTGCAAGCGAAGGACCTGGGGCCAAACGCCGTGCCGGCGCACTGTAAGGTGCTGGTGCGGGTGCT--------GGACGCCAACGACAACGCGCC---------------CGAGATCAGCTTCTCCACCGTGAAGGAGGCGGTGAGCGAGGCGGCGGCGCCGGGCACCGTGGTGGCCCTCTTCAGC------------GTCTCGGACCGCGACTCGGAGGAGAACGGGCAGGTGCAGTGCGAGCTGCTGCAGGGCGACGCGCCCTTCCGCCTCAAG ...:...x.-..x....::....x:------x......:..x..:..xxxxxx..:..x.x...xx:.::..:....x:.---............x..x.x:x.x..---....xxx:..:.------------...:.x...x..:.x.....x.:------------.::.x...:.:xxx.x..x.....:x:..xxx..:..:xx.....x...............x.:...x.......xxx.....xx.....xx.x:x.:.xxx.....::xxxx..x:......x.x:.x..:x...xxx.xx...x:.....x....x.x...xx....--------x.x..:..x:.-------------------------------.x:.....x.------------:.xx..:.....xx.::..-------------------------------------------------..xx..:..xx::.....-----......:..---------------------...:.x..x.xx:...:..---....x:.....---.x.:....x.....x.....x..-----.x...:--....xx.:xx...x.....x...::....------------------...x..:---....:x....:-----.....::....-------:.....---x....x..x:x.x..------.........:x....xx.......x..xx...x...:xx.:xxxx:..x.x......xxxx.x.....x..x.:x:.x.....:..xx:...x:x....::x....x....xxx.....xx..:..:xx...x:x...--:..:....---------...x.:.x.x...----x....-:::.....x:.-..x:.:..:.:..--:.x.x....x.xx..------.x...::.......------...x.....x..::.-.x..x.xxx.x.:..:.x.:..:x:x..x.:x..xxx:x..:.xx.:.-..::x:.:..x:x:.--------:....xx..........:...---------------.:....::.x:x.x:.x..x.x.....x.x....:x.:.x.:...x.---x..:.:::x....x.x.x:.::..x.------------..x..x.....x...:x:.:x.........xx...xxxx...:xxx..x.---........:........:x...... 9M1D15M6I49M3D24M3D12M12D23M12D169M8D11M31D10M12D19M49D18M5D9M21D19M3D11M3I23M5I6M2D29M18D7M3D11M5D11M7D6M3D15M6D138M2D8M9I13M4I5M1D11M1I13M2D15M6D14M6I15M1I48M1I15M8D21M15D47M3I26M12D50M3I25M 621/970 64.0% 1012/94230402 0.0% 292/970 30.1% 2734186 NA +5372 chr4 + 190214555 30721814 30721813 30722302 489 TCATCGTGCTTGACATCAACGACAACACGCCCACCTTCCCGTCGCCCGTGCTCACGCTCACGGTGGAGGAGAATCGGCCGGTGGGCACACTTTACCTGCTGCCCACAGCCACCGACCGCGACTTCGGCCGCAACGGCATCGAGCGCTACGAGCTGCTCCAG-----------------GAGCCCGGAGG--CGGCGGCAGCGGCGGCGAGAGCCGGCGCGCCGGGGCGGCCGACAGCGCCCCCTACCCCGGGG---GCGGCGGGAAC--------GGCGCGAGCGG------------------------CGGCGGCTCGGGAGGCTCCAA-GCGGCGGCTGGACGC-------------------ATCA-------------------------GAGGGCGGCGGCGGCACCA---ACCCCGGCGG-CCGCAGCAGCGT------------------------------------GTTCGAGCTGCAGGTGGCGGACACCCCGGACGGC--------------GAGAAGCAGCCGCAGCTGATCGTGA---AGGGGGCGCTGGACCGCGAGCAGC------GCGACTCCTACGAGCTGACCCTGCGAGTGCGCGACGGCGGCGACCCGC--CTCGCTCCTCGCAGGCCATCC chr4 + 94230402 27987933 27987932 27988576 27987933 27987932 27988576 644 TCAGGGTGCTGGACTCCAACGACAACGTCCCCGCCTTCGAGCAGCCCGTCTACACCGTGTCGCTGCCAGAGAACTCGCCGCCGGGCACGCTGGTGCTGCAGCTCAACGCCAGCGACCCCGACGAGGGGCAGAACGG---CGAG-GTCATCTACTCCTTCAGCAGCCACATCTCGGCCCGCGCCCGGGAGCTCTTCGGCATC-GCGCCGCGCACCGG-GCGCCTGGA-GGTGAGCGGCGAGCTGGACTACGAGGAGAGCAGCGTGTACCAGGTGTACGTGCAAGCGAAGGACCTGGGGCCAAACGCCGTGCCGGCGCACTGTAAGGTGCTGGTGCGGGTGCTGGACGCCAACGACAACGCGCCCGAGATCAGCTTCTCCACCGTGAAGGAGGCGGTGAGCGAGGCGGCGGCGCCGGGCACCGTGGTGGCCCTCTTCAGCGTCTCGGACCGCGACTCGGAGGAGAACGGGCAGGTGCAGTGCGAGCTGCTGCAGGGCGACGCGCCCTTCCGCCTCAAGAGCTCTTTCAAGAACTACTACACC--ATCGTCACCGAGGGGCCGCTGGACCGCGAGCAGCCGGGCGGCGACGCCTACACGCTGACGGTGGTGGCGCGGGACCGCGGCGAACCACCGCTCAGCACCAGCAAGTCATCC ...xx.....x...x:..........::x...:.....xx.:x......x:x...xx.xx..x..xx:.....::x....x:......:..xxxx....x..:..xx....x.....x....xxx..x.:x.....---....-.::.:xx:..x..:...-----------------.x......::.--.xx.....x.-...x..x.x:....-.....x..:-..:x::.:...xx.:xx..:x..:..---..:...x.x..--------x.:..:....:------------------------.....xx::.x:...:x.:::-....xx.........-------------------....-------------------------...x.x.........:..:---...x:..:..-..x.xx......------------------------------------..x........x.xx..xx...:.x..xxx.x..--------------x.::.:.x:.::..x.--.....x.---.....x..................------.....x.....:x......xx..xx:.:...x...x.......x..:.--...:x:x.:x...:.:..... 136M3D4M1D17M17I11M2I10M1D14M1D9M1D26M3I11M8I11M24I21M1I15M19I4M25I19M3I10M1I12M36I34M14I16M2D7M3I24M6I48M2I21M 327/480 68.1% 644/94230402 0.0% 173/480 36.0% 2733881 NA +11049 chr4 + 190214555 30722198 30722197 30723307 1110 AGCTGATCGTGAAGGGGGCGCTGGACCGCGAG---CAGCGCGACTCCTACGAGCTGACCCTGCGAGTGCGCGACGGCGGCGACCCGCCTCGCTCCT-CGCAGGCCATCCTACGGGTCCTCATCACCGACGTGAACGACAACAGCCCCCGCTTCGAGAAGAGCGTGTACGAGGCCGACTTGGCTGAGAACAGCGCCCCGGGGACCCCCATCCTGCAACTGCGCGCAGCCGACTTGGACGTGGGGGTCAACGGGCAGATCGAATACGTGTTCGGGGCGGCCA-----CCGAGTCGGTGAGGCGGCTGCTGCGCCTTGACGAGACGTCCGGCTGGC----------TCAGCGTCCTGCACCGGATCGACCGCGAGGAGG----------TGAACCAGCTGCGCTTCACGGTCATGGCCCGCGACCGCGGGCAGCCCCCCAAGACCGACAAGGCCACCGTGGTCCTTAACATCAAAGACGAGAACGACAACGTGCCGTCCATTGAAATCCGCAAGATTGGGCGCATCCCCCTCAAGGACGGGGTGGCCAACGTGGCCGAGGACGTTCTGGTCGACACCCCCATCGCTCTGGTGCAGGTGTCCGACCGAGACCAAGGCGAGAACGGGGTGGTCACCTGCACCGTGGTGGGCGACGTGCCCTTCCAGCTCAAGCCAGCCAGCGACACCGAGGGCGACCAGAACAAGAAAAAGTACTTCTTGCACACCTCGAC------CCCTCTGGACTATGAG----GCCACCCGGGAGTTCAACGTGGTCATCGTGGCGGTGGACTCAGGCAGCCCCAGCCTCTCGAGC-AACAACTCCCTGATTGTCAAGGTGGGAGACACCAACGACAACCCGCCCATGTTCGGCCAGTCGGTGGTG-GAGGTTTACTTCCCTGAGAACAACATCCCGGGCGAGAGGGTGGCCACGGTGCTGGCGACAGACGCAGACAGCGGTAAGAACGCCGAGATCGCCTACTCGCTGGACTCCTCT---GTGATGGGGATCTTTG---------------CCATCGATCCCGATTCTGGGGACATCCTGGTCAATACCGTG------CTGGACCGCGAGCAGACTGACAGGTATGAGTTTAAAGTTAACGCCAAAGACAAAGGCATCCCCGTGCTGCAGGGCAGCACTAC------GGTGATTGTGCAGG chr4 + 94230402 5230945 5230944 5232042 5230945 5230944 5232042 1098 AGCTGGTGGTAGAGAAGAGCCTGGACCGTGAGACCCAGTCCCACTACAGTTATGTGATCACG---GCGCTGGATGGCGGAGACCCGCCCAACTTTGGCACAGTGGAGCTTA-GCATCCGCGTCATCGACTCCAATGACAACAACCCACTCTTCGAGGAGCCGGCCTACACTGTCAGCGTGCCTGAAAATGCCCCACCGGGCACACCAGTCATCCGCCTCAACGCCTCTGACCCGGATGAGGGCACCAATGGGCAGGTGCTCTACTCTTTC--CACAGCTATGTCTCTGACCGGGCTCGAGAGCTCTTCCAGATCGAC----CCTCAGAGTGGCCTCATCACAGTCAGTG----GTGCC--ATCGACTATGAGGAGGGACATGTATATGAGCTGGATGTGC----------AGGCCAAGGACTTGGGACCTAACTCCATCCCTGCCCACTGCAAAGTGACCATCAGCGTGCAGGACGCCAACGACAACCCTCCCCTCATCAACCTTC---------------TCTCCGTCAACAGTGAGCTGGTGGAGGTGAGCGAGAACGCCCCTCCGGGGTACGTCATTGCCCTGGTGCGGGTCTCGGACCGTGACTCGGGGGCCAATGGACGTGTGCAGTGCAAGCTGCTGGGCAACGTGCCCTTCCGGCT------------------------------GCAGGAGTATGAGAGCTTCTCCACCATCCTGGTGGATGGGCGGCTGGACCGTGAGCAAAGGGACC----AGTACAACCTCACCATCCAGGCCAAGGACAACGGT-GTCCCCTCCTTGCAAGCTACCAAGTCCTTCACTGTCAAGATCACCGATGAGAATGACAA-CCACCCTCACTTTTCCAAGCCCTACTACCAGGTCATCGTGCAGGAGAACAACACCCCGGGGGCCTACCTCCTCTCAGTCTCAGCAAGGGACCCTGACCTGGGCCTCAATGGCAGCGTCTCCTACCAGATTGTGCCCTCCCAAGTCAGGGACATGCCTGTCTTCACTTATGTCTCCATCAACCCCAACTCTGGAGATATCT------ATGCCTTGAGGTCCTTCAATCATGAACAGACCAAGGCCTTTGAGTTCAAAGTCTTGGCGAAAGATGGGGGCAATCCCTCTCTGCAGAGCAATGCCACTGTCAGGGTGATTGTCCTGG .....:.x..::..::.:xx........:...---...:x.x...x.x::x.xx...:.x:.---.:..xx..:.....x........:x:..::x-.:...xxx.x.:..-.x:...x.:...:....x:x..:.......:...x.x.......:..xxx.:x...:xx.:.::.x..x....:..::x.x.x.....x..x..x:..x.x.:x..xx:...xx.:...::...:.x...x::...:......:.xxxx...x:x...--x:.:..:.-----.:..x:x..:xx.:x:...x:.x.:xx.:...----.x..x.:x....----------....:.----.::..--......:::.......----------...:.::.x..:..----------x....x:x...:xx..:.xxxx.:...xxx.:.x.x.xxx..xx...::.x.:.:.:.xx.:....xx.........x:x..x::...::.xx.:.---------------..:..x....x:::.:.x...:x:.x...:x....:...::.:xx:x.:xxx.x:...:..:.......:...x..x.....x...:x:..x.xx..:..:xxx..xxxx....xxx..x.....:............:...------------------------------.x.x:..x.x:..x:.....:xxx..:.::.::------x.xx......::....----.xx...----...x....x.x::....xx...x:x....xxx..:-.:...xx...:x.:...-.x...x...:.x.:.......:.x:xx..::xx..:.....-..:...x:::.:xx...:x.xx.:x.:-x....:xx.x.x.xx..........:......x.xxx:xx.xx:.x.:..x:::..:.x:...x.x...xxx..:xxx..:.x.::x:..x.....:x.x.x.xx:....:---..x.x..:x..x::..---------------.....:.:...:.:.....:..:...:------..:..x..------:.x:.:.::..:.....::.x:xx.x......:.....:xxx..x.....::::....x:...x:x......:...:::.:..------.........x.x.. 32M3I27M3D31M1I14M1D158M2D8M5I32M4D12M10I6M4D5M2D16M10I14M10D96M15D142M30D33M6I16M4I6M4D35M1D17M1I41M1D27M1I111M3I16M15I27M6D8M6I83M6I14M 610/1027 59.4% 1098/94230402 0.0% 154/1027 15.0% 25491253 NA +3219 chr4 + 190214555 30728239 30728238 30728297 59 ATTCATTTGTGTGTGTGTGTGTGTGTAT------------ACATACATATGTATATATATATATATATATA chr4 + 94230402 85834534 85834533 85834604 85834534 85834533 85834604 71 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA ............x.............:.------------:............x...:..:.x...::.:. 28M12I31M 49/59 83.1% 71/94230402 0.0% 12/59 20.3% -55106295 -39124107 +3693 chr4 + 190214555 30728247 30728246 30728314 68 GTGTGTGTGTGTGTGTGTATACATACATATGTATATATATATATATATATAGAGAGAGAGAGAGAGAG chr4 + 94230402 6083173 6083172 6083240 6083173 6083172 6083240 68 GTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAAAAG .............:.::..:...x......:.........x:x..:..:..:.:.:.:.:.:.:.:.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 24645074 NA +3488 chr4 + 190214555 30728249 30728248 30728316 68 GTGTGTGTGTGTGTGTATACATACATATGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 6083173 6083172 6083240 6083173 6083172 6083240 68 GTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAAAAG .............:.:.....:.x.:..:...........x:x..:..:x.:.:.:.:.:.:.:.:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 24645076 NA +3021 chr4 + 190214555 30728251 30728250 30728318 68 GTGTGTGTGTGTGTATACATACATATGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 6083173 6083172 6083240 6083173 6083172 6083240 68 GTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAAAAG .............:::.:.:...x.::.............x:x..:.x:x.:.:.:.:.:.:.:.:.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 24645078 NA +3020 chr4 + 190214555 30731335 30731334 30731373 39 TTCCATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529264 72529263 72529302 72529264 72529263 72529302 39 TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..::...:.:...................:......... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -41797929 -52432473 +3020 chr4 + 190214555 30731335 30731334 30731373 39 TTCCATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525691 72525690 72525729 72525691 72525690 72525729 39 TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..::...:.:...................:......... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -41794356 -52436046 +3241 chr4 + 190214555 30743695 30743694 30743738 44 AATCCTTCTTCTCAATCTTTCTCTCTCATACATACACACACACA chr4 + 94230402 75248045 75248044 75248088 75248045 75248044 75248088 44 AATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ........:....xx...:.........:...:........... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -44504350 -49726052 +3324 chr4 + 190214555 30745758 30745757 30745828 71 CTCAGTTTATTTGTGTGTGTGTATGTGTGTGTGTGTGCGTGCATGCACATATAATTTTTCTTCTAAAGAGA chr4 + 94230402 60813654 60813653 60813724 60813654 60813653 60813724 71 CTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGTAAACATGCAAGAATTCATCTAAAAGGA ......x.:.::x...................x..x.x:...:.:x....::..xxx...x......::.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -30067896 -64162506 +3239 chr4 + 190214555 30752774 30752773 30752843 70 CTGTAGGGGCAAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAAAAAGAAAAAAAGAACTCTGGAAAAT chr4 + 94230402 31488321 31488320 31488390 31488321 31488320 31488390 70 CTGTAGAGACACTGCCAGAAAAGGGAGGGGAGAGGAAGGAAAAAAAAAGAAAAAAAGGACTCTGAAGTAT ......:.:..xx:xx.:....:::.:::..:..:..:::.................:......:.:x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -735547 -93494855 +3854 chr4 + 190214555 30755948 30755947 30756059 112 GTGCACCTGTAGTCCCATCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG----------TGAGCCGATAT-CGCACCA---CTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......x......:...x.....::::........x.xx.x...x.............:..x.xx:..:..:..----------::...x...:.-:..x.:.---....x.-.....x....... 74M10I11M1I7M3I6M1D13M 83/111 74.8% 125/94230402 0.0% 15/111 13.5% -45277256 -48953146 +3102 chr4 + 190214555 30765111 30765110 30765170 60 TAGGACTTCAGATGCTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAGGAAAGGAAAGTAG chr4 + 94230402 9639933 9639932 9639992 9639933 9639932 9639992 60 TAGGATTTAAGATGGCTTTTTCTTTTTTTTTTTTTATTTTTGAGTTCTAAAAGGAAGAAG .....:..x.....x:.....:.............x.....:..xxxx...:.:...x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 21125178 NA +3616 chr4 + 190214555 30775766 30775765 30775839 74 GCGTATCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGTGAATCGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:.:x....:.:.........:.::........x.xx.....x.:...........:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -45257438 -48972964 +3309 chr4 + 190214555 30780366 30780365 30780436 71 ACGTGGTGGCACATGCCTGTAGTCCCAACTACTCAGGAGACTGAGGCAGGAGAATCGCTTGAACCCAGAAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::....::..:.--......:...:.....::::..:.....x.xx.x...x.:.............. 15M2D54M 50/69 72.5% 69/94230402 0.0% 2/69 2.9% -45252830 -48977572 +3433 chr4 + 190214555 30783164 30783163 30783218 55 TCATTTCAAATGGTTTCCTAGTATTAAAAAAGAAAAAAAACCAATAAACTTTTCA chr4 + 94230402 14007412 14007411 14007466 14007412 14007411 14007466 55 TCATTTCACATATCTTCACAGGATTAAAAAAAAAAATAAACCAACAAACTTTTCA ........x..:x:...x:..x.........:....x.......:.......... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 16775752 NA +3430 chr4 + 190214555 30824073 30824072 30824168 96 GGTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGCTT chr4 + 94230402 63697136 63697135 63697239 63697136 63697135 63697239 104 GGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x.:..:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:....----.:.:.:...::.:.::..........:......::.. 46M4I13M4I37M 65/96 67.7% 104/94230402 0.0% 8/96 8.3% -32873063 -61357339 +3088 chr4 + 190214555 30824079 30824078 30824160 82 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -26547949 -67682453 +3063 chr4 + 190214555 30824090 30824089 30824177 88 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGCTTCCCTCATAT chr4 + 94230402 57372027 57372026 57372114 57372027 57372026 57372114 88 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATAT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xxx:x.::....... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% -26547937 -67682465 +3381 chr4 + 190214555 30846983 30846982 30847065 83 CATGGTGGCATGTTCAAGAAGTTCCAGCTACCTGGGAGGCTGAGGTGGGAGGAGCACTTGAGCCCAGGAGGTCAAGGATGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..:x.:x.x............:..::........x:xx.x.:.........:.....:..x.:x:..x..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -45186214 -49044188 +3203 chr4 + 190214555 30882197 30882196 30882281 85 TCCTCCTCCTCTTCCTTTTAACTCCTCCTCCTCCTCCTCTTCTTCTTCATCTTTGTCTTCATCTTCATCTTTGTCTTCTTCTTGG chr4 + 94230402 34908177 34908176 34908257 34908177 34908176 34908257 81 TCGCTCTCCTGGTCCATTT----CCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGG ..x::.....xx...x...----..........:...x.:.....:..x.xx.:::.xx...x......x.::.....:...... 19M4D62M 58/81 71.6% 81/94230402 0.0% 4/81 4.9% -4025980 -90204422 +3563 chr4 + 190214555 30894410 30894409 30894519 110 GAAAGTGGT-ATTGATGAGGCCAAGGCCCTGGTCTGGAGACCAGTTTCATTCAGGAAAAAAAAAAAAAAAA-AAAAAAAAAAAATATATATATATATATATATATATATACA chr4 + 94230402 1494956 1494955 1495055 1494956 1494955 1495055 100 GAAAGCAGTGATGGACGTGGCAGAAGCCACA---TGGAGA---------TTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .....::..-..x..:.x...x:.:...x::---......---------......:...x.:.........-.:......x.x......:.:..:...:.....x....:.. 9M1I21M3D6M9D22M1I40M 75/98 76.5% 100/94230402 0.0% 14/98 14.3% 29399454 NA +3182 chr4 + 190214555 30894453 30894452 30894533 81 TTTCATTCAGGAAAAAAAAAAA------------AAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACA chr4 + 94230402 78347538 78347537 78347630 78347538 78347537 78347630 93 TTTCTTTTAACAAAAGAAAAAACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ....x..:.:x....:......------------.x....x...x..:...x.x.:xx.:.:.xx..:......................x.. 22M12I59M 61/81 75.3% 93/94230402 0.0% 12/81 14.8% -47453085 -46777317 +3053 chr4 + 190214555 30894466 30894465 30894516 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 90030076 90030075 90030126 90030076 90030075 90030126 51 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ...x.......xxx:...::..............:.:.:............ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -59135610 -35094792 +3242 chr4 + 190214555 30894466 30894465 30894531 66 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACA chr4 + 94230402 78347565 78347564 78347630 78347565 78347564 78347630 66 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x..x....x...x..:.....x.:xx.:.:.xx..:.........:............x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -47453099 -46777303 +3383 chr4 + 190214555 30894468 30894467 30894523 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x.:.::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 29399468 NA +3158 chr4 + 190214555 30894470 30894469 30894525 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x.:.::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 29399470 NA +3036 chr4 + 190214555 30894498 30894497 30894537 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 26485416 NA +3088 chr4 + 190214555 30894508 30894507 30894584 77 TATATATATACACACACACACACACACACACACACACACACACACACACACATATATACATATACACACACATATAT chr4 + 94230402 74526053 74526052 74526129 74526053 74526052 74526129 77 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT .:..x..xx.x.x....xx.x.:x..............::x...:.....x........:....:.:::.:x..x.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -43631545 -50598857 +3231 chr4 + 190214555 30894570 30894569 30894647 78 TACACACACATATATACACACACACACATATATATATATATATATATGTTTTGAGTTTATAAATTCATAGTTTAATCC chr4 + 94230402 89823932 89823931 89824008 89823932 89823931 89824008 77 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAG-TTATATGCTTCTACCTCAATCC ..:.:.::x...:.:.............:x....xx........::.:..:....-.....x::.:x..x:.:..... 55M1D22M 54/77 70.1% 77/94230402 0.0% 1/77 1.3% -58929362 -35301040 +3429 chr4 + 190214555 30906894 30906893 30906983 90 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCTAGGAGGTGGAGGTTGCAGTGACCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.x....:.:...........::........x.xx.x...x.::.......:..:..x.xx:..:..:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% -45126312 -49104090 +3183 chr4 + 190214555 30962766 30962765 30962848 83 GACCCAGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGTGGTAATTCTATATAAGTGAAGTGTTGATACACTTGAGAC chr4 + 94230402 41375515 41375514 41375597 41375515 41375514 41375597 83 GATCCGCTCCTAAATAGAAGAAAAAAAAAAAAAAAAAAAGGAGATATGATCTTAATTTAGCTAATTGTTGATCTGGTAAAGAC ..:..:x..:....x.:..:...................:x..xx:.:..::..xx.x..:x..x.......x::x.x:.... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% -10412749 -83817653 +4152 chr4 + 190214555 30963879 30963878 30964045 167 TTGGCAGTCTCAGAGGGGCCATATTTTTACATGGATGAACCATTCCGGGACAATTTCTAC-AATATATTA--AGCACAAACATATTATCTTTCTATTTCAAACACATATGTCTTATCTTGC---TCCTTTGATGTATCTTCAGGAAATACATA--TAATTTGGC--TTTGTAAAAAA chr4 + 94230402 88459267 88459266 88459438 88459267 88459266 88459438 172 TTGGCAGCCTTGCACAGGTCATATTTTTACATGGATGAACTGTTCCTCAACAATTTCCCCTAGTGTGCTAGCAGCACAAACAGGCTTTTCTTTGCGAGCAGGTACGTGTGCCTTCTTTTTCCAGTTCTCTTCTGTTCC-----GACACACATGGCTCATGTGGCCATTTGCAAAGAA .......:..::x.x:..:.....................::....xx:........:x.-.:.:.::..--..........x::.x.::..:xxxxx..:::..:.:..:...x.:..x.---.:..:.xx...x:.-----..x.:....:--.x..x....--....:...:.. 60M1I9M2I49M3I14M5D10M2I9M2I11M 110/162 67.9% 172/94230402 0.0% 15/162 9.3% -57495388 -36735014 +3245 chr4 + 190214555 30974140 30974139 30974244 105 TTGCAGTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176310 50176309 50176414 50176310 50176309 50176414 105 TTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .....x.x:.:.:.:.x..::..x:x...x....:x::............::xxxx.::x..::...x..:.:.:x.:::...::.........::.:.x..... 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% -19202170 -75028232 +3262 chr4 + 190214555 30974145 30974144 30974365 221 GTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCCTTTCCTTTCC----------TTTCCTTTCCTTTCATAAATTTCTGT---------CTTTGATTACTAAATGTATTTCTTCTCATGACCTGGGGAGGA--------AAACAAAGCAGAACTTCCTCACAAAGACAATACTTCC chr4 + 94230402 28328447 28328446 28328693 28328447 28328446 28328693 247 GTTCTCTGCTTCCAATGTTTTTCCATTTTATATTG-TCTGTTTCTCCTTTTATGTTTTGATTTTCATTTATTCTACTTTTTCTCTCCACTTTAATTTTTTTCTTCCTTACATTTCCTACTCACTTATTTCCTTCACCTATTTTGGCTTCTTTTAAATATAGCTCTCAGTTCTAAATTGCCATCACTTCAAAATCTGAAGATAACCACCATCAAACCTTTCATAGTTCTCTCAGCAGGACAATATTCTC .....:.x:...:xx:x..:..:.x....x.x..x-.:.x......:..:.x.x.:::xx::..:x...x..::x....:.:...::x:...xx...:..........x.x.....----------.......:x.:.x:x.x:::....x.---------..:.x.x.x......xxx:x..x::...x:.:...::..x:.--------....xxxx..x.::.::....xx.:.......:.::. 35M1D80M10I26M9I42M8I37M 131/220 59.5% 247/94230402 0.0% 28/220 12.7% 2645698 NA +3841 chr4 + 190214555 30974150 30974149 30974245 96 TTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTT----TCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..:....x....xx.....x....xxx.:..:x..:::.:----.......:..:.:.::..........::.:...x... 59M4I37M 66/96 68.8% 100/94230402 0.0% 4/96 4.2% -32722990 -61507412 +3107 chr4 + 190214555 30974166 30974165 30974231 66 TTCTTTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTT chr4 + 94230402 34366984 34366983 34367049 34366984 34366983 34367049 66 TTTTTTTGTGTTTTCATTTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCTT ..:....x:x:....x..:..x:........:.........:::.:.:.:::.:....:...::.. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -3392818 -90837584 +3182 chr4 + 190214555 30974173 30974172 30974248 76 TCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 76394490 76394489 76394562 76394490 76394489 76394562 73 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTC---CTTTTTTTCTTTTGCCTCTGCTCTT .::...:x.:...:..........:.x.......x..xx...:x....---....:........x.:.::x:.... 48M3D25M 53/73 72.6% 73/94230402 0.0% 3/73 4.1% -45420317 -48810085 +3145 chr4 + 190214555 30974201 30974200 30974289 89 CCTCCCTTTCTTTCTTTCTCTTT----CTTTCTTTCTTTTTCTTTCTTTCTTCCTTTCCTTTCCTTTCCTTTCCTTTCATAAATTTCTGTCTT chr4 + 94230402 62204756 62204755 62204848 62204756 62204755 62204848 93 CCTACTTCCACTTCTGTTTCCTCAAAATCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTTTTGTGTGTATGTGTTTT ...x.:.::x:....x.:..:.:----::.....:....x....:........:...:..:......:x..::x...::.:x:.x.x...:.. 23M4I66M 58/89 65.2% 93/94230402 0.0% 4/89 4.5% -31230555 -62999847 +3324 chr4 + 190214555 31000709 31000708 31000779 71 TGTGACACAAAGAAAAGAGAAGAAAAGGACAGAAAAAGAAACAACACAAGTTCCATCTATGTAAAACATAG chr4 + 94230402 69385190 69385189 69385260 69385190 69385189 69385260 71 TGTGCTACAACAGAAAAAAAAGAAAAAGACAGTGAAAAAAAGATGACAAGATATATTTATGCAAAACTTAG ....x:....x::...:.:.......:.....x:...:...x.xx.....x.x:..:....:.....x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -38384481 -55845921 +3823 chr4 + 190214555 31056405 31056404 31056538 134 AAAGAAAGAAGGAAAGAAGGAAAGAAAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAAGGGGAAGGGAAGGGAAGGAAGG chr4 + 94230402 8397454 8397453 8397587 8397454 8397453 8397587 134 AGAGCCAGAAGGAAGTGAG-AGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAA--AAAGGGGAGTAGAAGGGTAAAAGAG .:..xx........:x:..-.:....::.x....x:.::...:.x...x..:.x....:x:.:..:..:...x....x.x:.....---::.:x........:xx.:...--........:x:......x.::.::. 19M1D66M3I21M2D25M 86/131 65.6% 134/94230402 0.0% 6/131 4.6% 22658951 NA +3173 chr4 + 190214555 31056452 31056451 31056532 81 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGGAAGGGAAGGGAA chr4 + 94230402 41112178 41112177 41112258 41112178 41112177 41112258 81 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:..::x..:...:.:x.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -10055726 -84174676 +3213 chr4 + 190214555 31056538 31056537 31056583 46 GAGAGAGGGAGAGAGAGAGAGGAAGGGAAGGGAAGAGAGGAAGGGA chr4 + 94230402 77174153 77174152 77174198 77174153 77174152 77174198 46 GAAAGACGTAGAGAAAGGGAGGAAGGGAAAGGAAGAGAGGGAAGGA ..:...x.x.....:..:...........:..........:.:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -46117615 -48112787 +3048 chr4 + 190214555 31056639 31056638 31056696 58 AGAGAGAGAGAAAGAGAGAGAGGAGAGAGAGAAAGAGAAAGAGAGAGGAGAGAGACAG chr4 + 94230402 73744718 73744717 73744775 73744718 73744717 73744775 58 AAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAG .::..:.:......:..:..:...:.....:..:.:....::.:.:..:.x.:.:... 58M 39/58 67.2% 58/94230402 0.0% 0/58 0.0% -42688079 -51542323 +3728 chr4 + 190214555 31084654 31084653 31084783 130 GAAAGAGAGAGAGAGAGAGAGAGATAAAGGGGGAGGGGAGGGAAGGGGAAAAGGGAG-GAGGGGAGGGGAGAAGAGGGGAGGGGAG-GGGATGAGGGAGGGGAGGGGAGGAGATGGGGAGGAGGGGGAGGGG chr4 + 94230402 14577296 14577295 14577426 14577296 14577295 14577426 131 GAGATAAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGAGTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGACA-GCTAAGGAAGGGTAAGGG ..:.x.:.::..:::x.....:......:.:...:.:...::.x......xx.::..-.x:..x...:......:..x...::::.-.:......xx..:.xx.::..:..x.-.xx:....:...x.:... 57M1I28M1I26M1D18M 82/129 63.6% 131/94230402 0.0% 3/129 2.3% 16507358 NA +3138 chr4 + 190214555 31085829 31085828 31085869 41 AGACTCTTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTC chr4 + 94230402 68982952 68982951 68982992 68982952 68982951 68982992 41 AGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTC ...x.:..x...:............................ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -37897123 -56333279 +3015 chr4 + 190214555 31085830 31085829 31085868 39 GACTCTTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 21794593 21794592 21794631 21794593 21794592 21794631 39 GACACTGTTCTCTCTCTCTCTCTCTTTTTTTTTTTTATT ...x..x.............................x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 9291237 NA +3044 chr4 + 190214555 31085835 31085834 31085868 34 TTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554023 6554022 6554056 6554023 6554022 6554056 34 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..:............................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 24531812 NA +3514 chr4 + 190214555 31097326 31097325 31097396 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x.x........::....x.xx:..:..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -44935881 -49294521 +3451 chr4 + 190214555 31097467 31097466 31097545 79 AGGAAGAAAGAAAGGAAGAAAGAAAAAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAT chr4 + 94230402 41112178 41112177 41112256 41112178 41112177 41112256 79 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGAT .....:::......x..x...x...x....x.:..:..xx.x...x.............x:x.:::..x....:.:... 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% -10014711 -84215691 +3163 chr4 + 190214555 31099982 31099981 31100028 47 AGAAGGAGGAAGGGAGGGAGGGAGGGAAAAAGAGAGGGAGGGAGGAA chr4 + 94230402 3837236 3837235 3837282 3837236 3837235 3837282 47 AGTAGGAGGAAGAAAGGGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ..x.........::....:...:.:......:.:....:...:.... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 27262746 NA +3102 chr4 + 190214555 31113809 31113808 31113861 53 TGAAATTTAAAAGTTAACCTTTCTTTTTTTTTTTTTTTTTTTTGAGATGGAGA chr4 + 94230402 39874759 39874758 39874811 39874759 39874758 39874811 53 TAAAAGTTAAAAATTGACTTTCAGTTTTTTGTTTTTTTTTTTTAAGATGTAGA .:...x......:..:..:..:xx......x............:.....x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -8760950 -85469452 +3051 chr4 + 190214555 31116782 31116781 31116851 70 TATTGTATATTATCTAACATTCAAACTGAATATTTGTGGGGTTTTTTTGTTGTTGTTGTTTGGTTTTTTT chr4 + 94230402 46755203 46755202 46755265 46755203 46755202 46755265 63 TGCTGCATCTTAACTGGTGTTTAGG-------TTTGTTGGGCTTTTTTGTTGTTGTTGTTTTGTTTTTTT .::..:..x...x..::::..:.::-------.....x...:...................x........ 25M7D38M 48/63 76.2% 63/94230402 0.0% 7/63 11.1% -15638421 -78591981 +3137 chr4 + 190214555 31120401 31120400 31120460 60 TTTCAGTCTTGTCTTTCGTTGTTTTTCTTTCTATTTTTTTCTTTTTTTTTTTTTTTTGGT chr4 + 94230402 6207720 6207719 6207779 6207720 6207719 6207779 60 TTTCAGTCTTGTGTTGGCTTGTTGTTATTGTTGTTTTTCTGTTTTTTTTTTTTTTTCTGT ............x..xxx.....x..x..x:.:.....:.x...............:x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 24912681 NA +3292 chr4 + 190214555 31127992 31127991 31128100 109 TGTGCATATATATGTGTGTCCATGTGTATATATATACATATATATATGTATGCACATATGCATACATATGTATATATGTGTGTGTATATATATGCATATATATGTATAT chr4 + 94230402 5214219 5214218 5214321 5214219 5214218 5214321 103 TGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATG--CATTTGCATGTGTGTGCGCAAACGTGTGTG----TGCATGCAGATGTGTGCACAT ..x...:::..x:......x.:::x..:.x.::.:...:..x..::......--...x.....:::.:..:::.x.:.......----.::.....x..:.:..:.:.. 52M2D30M4D21M 66/103 64.1% 103/94230402 0.0% 6/103 5.8% 25913773 NA +3221 chr4 + 190214555 31128016 31128015 31128079 64 TGTATATATATACATATATATATGTATGCACATATGCATACATATGTATATATGTGTGTGTATA chr4 + 94230402 40388217 40388216 40388280 40388217 40388216 40388280 64 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA ...:.:...:.::x...x..:.........:..:........x....:..xx.....:xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -9260201 -84970201 +3810 chr4 + 190214555 31128053 31128052 31128156 104 ATACATATGTATATATGTGTGTGTATATATATG----CATATATATGTATATATGTGTATATATATACACATATATATGTATGCACATATACATATATACACACACAC chr4 + 94230402 21109195 21109194 21109302 21109195 21109194 21109302 108 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......:...:.x.x....x.:....x......----..:.....:x::.:..:x.:..::...:...x...::x.x...:.::.::.:..::x....:..::..... 33M4I71M 68/104 65.4% 108/94230402 0.0% 4/104 3.8% 10018858 NA +3067 chr4 + 190214555 31128081 31128080 31128133 53 ATATGCATATATATGTATATATGTGTATATATATACACATATATATGTATGCA chr4 + 94230402 68888532 68888531 68888584 68888532 68888531 68888584 53 ATATGCAAATATATGTATTTATTTGTATTTGTATACACCCATATCTAGATGCA .......x..........x...x.....x.:.......x:....x.:x..... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -37760451 -56469951 +3425 chr4 + 190214555 31128102 31128101 31128224 123 TGTGTATATATATACACATATATATGTATGCACATATACATATATACACACACACACACACACGGACACACATATAAAAGTCTGAAACAAAATCTTCTTTAAGTAACCTGAACTTCATGTAAA chr4 + 94230402 47135177 47135176 47135293 47135177 47135176 47135293 117 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACT----CCTAAAAGAACTTTTGAAACAGACTGTGCTTTA--CCAGCTGCACTTGAAGAAAA .........::........:x..xx..x.::::.:..::..:.:.::..........:.....x----.x:.x.x:..xx.:.......:.x.x.x.....--:x.x...x....x.x.x... 64M4D33M2D20M 78/117 66.7% 117/94230402 0.0% 6/117 5.1% -16007075 -78223327 +3512 chr4 + 190214555 31143088 31143087 31143146 59 CACTTTCTCTTCCCCACCCCTCTCCAAAAAAAAAAAAACAAAAAGAAAAGAAAAAAAAA chr4 + 94230402 56761792 56761791 56761850 56761792 56761791 56761850 59 CACCTTCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAACCCACAAAAAACAAAAAAAAAA ...:...:.::....x....:.:..............x.x.x..:...x:......... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -25618704 -68611698 +3372 chr4 + 190214555 31143096 31143095 31143210 115 CTTCCCCACCCCTCTCCAAAAAAAAAAAAACAAAAAGAAA------AGAAAAAAAAAGGGGGATAGTTGCAAGTTTCTTTCACAGTAA---CTGTACG------AAGCCTGATTAGCAGAACACAACACA chr4 + 94230402 47473559 47473558 47473682 47473559 47473558 47473682 124 CTTCCCCCCCCCCCTCCAAAAAAAAAAAAACAAACAAAAAACACCCAGAAACAGAAGTATGGAAAGC--CAACTATGATTTGCAGTACACTCTGTTTGAATAACAAGCCTGA----CAAAACAAAGCATA .......x....:.....................x.:...------.....x.:..:x:x...x..:--...x.x.xx..::.....x---....x:.------........----..:....x.:..:. 40M6I21M2D19M3I7M6I8M4D14M 84/109 77.1% 124/94230402 0.0% 21/109 19.3% -16330463 -77899939 +3100 chr4 + 190214555 31154927 31154926 31154994 68 TATATATATATATACACACACACACACATATATACGTATACATACATACACACACATATATACGTATA chr4 + 94230402 89823932 89823931 89823999 89823932 89823931 89823999 68 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTA .......:x...:...............:x....xx....:....:..:x.xx.xx.....:.x.x.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -58669005 -35561397 +3660 chr4 + 190214555 31154931 31154930 31155021 91 TATAT-ATATACACACACACACACATATATACGTATACATACATACACACACATATATACGTATATATATGTGTATATATATACATATATAT chr4 + 94230402 29286186 29286185 29286277 29286186 29286185 29286277 92 TATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTAT .....-.......:....:..x.x::......:x...x.x.x.....xx.x..:.x...::..:....x...:.x...x.....:...x... 5M1I86M 66/91 72.5% 92/94230402 0.0% 1/91 1.1% 1868745 NA +3027 chr4 + 190214555 31154952 31154951 31155003 52 ACATATATACGTATACATACATACACACACATATATACGTATATATATGTGT chr4 + 94230402 89823929 89823928 89823980 89823929 89823928 89823980 52 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..x......:.x.....:...:.........:x....xx........:..:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -58668977 -35561425 +3231 chr4 + 190214555 31154969 31154968 31155038 70 TACATACACACACATATATACGTATAT--ATATGTGTATATATATACATATATATACACACACATATATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ..:...x...........x::x.....--:......::...:........:..:...:.x:.:..x:..:.. 27M2I43M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% -10594127 -83636275 +3524 chr4 + 190214555 31155043 31155042 31155111 69 TATATACACACACATATATATGTATATCTACACACACGTATATATACAT--ATATACACATATATCTATGT chr4 + 94230402 41749096 41749095 41749166 41749096 41749095 41749166 71 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGT ......x...........x:.x......x::.::::.....:.......--..:...:.x......:.... 49M2I20M 53/69 76.8% 71/94230402 0.0% 2/69 2.9% -10594053 -83636349 +3434 chr4 + 190214555 31195367 31195366 31195435 69 TGGAGTTTTTTTTTATTTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGTTTTGAAACAGTGTCTCTGTT chr4 + 94230402 65286678 65286677 65286739 65286678 65286677 65286739 62 TGGAGTTTATTTTAGTTTAGGTGTTTTTTTTTTTTGTTGTTGTTGTTGTTTTTAA-------CTCTGTT ........x....x:...:xxxx.............................x..-------....... 55M7D7M 53/62 85.5% 62/94230402 0.0% 7/62 11.3% -34091311 -60139091 +3225 chr4 + 190214555 31196196 31196195 31196283 88 CAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAACAAACAACAACAACAACAAACCCAAAACGAACAAACAAACAAATAAACCAAAA chr4 + 94230402 56324411 56324410 56324498 56324411 56324410 56324498 88 CAATTTGGGTCACTGATATCATCTGCATTACAAAAATAATAATAATAAAAAGCACTGCAAAACGAACGAACAAAGAAACAAACCAAAA ..:::.....x..x..xxxx:x..x...:x.....xx..:..:..:..x..xx.x:x..........:......x...:......... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% -25128215 -69102187 +3318 chr4 + 190214555 31203674 31203673 31203739 66 ATTGTGTGTATATATATACATATATGTACATGTATATGTATATATGTATGTACATATATACACATA chr4 + 94230402 56867298 56867297 56867363 56867298 56867297 56867363 66 ATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .........:x...:.....:....::..xx:.....x.:.::......:....x:...::...:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -25663624 -68566778 +3032 chr4 + 190214555 31203675 31203674 31203730 56 TTGTGTGTATATATATACATATATGTACATGTATATGTATATATGTATGTACATAT chr4 + 94230402 55694453 55694452 55694508 55694453 55694452 55694508 56 TTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ....:..:...:...:....:.:....::.....x:x:..:..:..:....:.... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% -24490778 -69739624 +3243 chr4 + 190214555 31203705 31203704 31203821 117 GTATATGTATATATGTATGTACATATATACACA-TATATATACATATATGTACATATATATGTGTGTGTGTGTATATATATATATAGACTTCTTTCGCTTTTTATTTAGTCCTTAAAA chr4 + 94230402 6857574 6857573 6857690 6857574 6857573 6857690 117 GTATAAGTATCTGT-TCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCTAGTCTGTGAAA .....x....x.:.-.x..x:....xx.x.x..-x.x.....:.::..::...:....x..........x...:.:.:.:.x.:x.:.:xx:...:x::.:....:.....:x.:... 14M1D18M1I84M 75/116 64.7% 117/94230402 0.0% 2/116 1.7% 24346131 NA +3164 chr4 + 190214555 31203723 31203722 31203786 64 GTACATATATACACATATATATACATATATGTACATATATATGTGTGTGTGTGTATATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...:......:..::.:.x......x::..x:....:...:...:.x.....x.......x.:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -45505868 -48724534 +3167 chr4 + 190214555 31216895 31216894 31216968 74 GTGCACCTGTGGTCCCAGCTACTCAGGAGGCTGAGACAGAAGAATCACTTGGGCCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:.........::::........x.xx:x...x......::..::.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -44816309 -49414093 +3005 chr4 + 190214555 31217298 31217297 31217359 62 TGTACTTTCTTATCCTCCATTAAGCATGTTAGGTCTTCTTCTTTTTCTTTTTTTTTTTTTAT chr4 + 94230402 45418061 45418060 45418122 45418061 45418060 45418122 62 TGTAATATTTTGTTTTTAATGAAATATGTTATGTTTTTTTCTTTCACTTTTTTTTTTTTAAT ....x.x.:..:.::.:x..x..::......x..:..:......:x.............x.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -14200763 -80029639 +3302 chr4 + 190214555 31235300 31235299 31235383 84 ACATGGTGGCATGCACCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAAGCGGAGGTTATAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--.....x....:.:.........:::.........x.xx.x...x::........::.:.:x:xx:..:.:... 9M2D73M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% -44797896 -49432506 +3631 chr4 + 190214555 31250094 31250093 31250157 64 ATTCTGTCTCAAATAAATAAATAAATAAAACAAAAACAAAAACAAACAAACAAACAAAAAACCC chr4 + 94230402 73193168 73193167 73193230 73193168 73193167 73193230 63 ATTCTGTCCAAACTAAA-AAATATCTAAAACAAAAACAAAACCAACCAACCAAACAAAAAAACC ........:x..x....-.....xx................x...x...x...........x.. 17M1D46M 54/63 85.7% 63/94230402 0.0% 1/63 1.6% -41943074 -52287328 +3288 chr4 + 190214555 31257410 31257409 31257511 102 AGACTCCGTCAAAAGAAAGAAAGAAAGGAAGGGAGGGAGGGAGGGAAGGAAGGAGCAACTATCTTAAAAGAAGGAAATGCTACTTATTTTTGTGCTTTCGTT chr4 + 94230402 57721089 57721088 57721173 57721089 57721088 57721173 85 AGACTTCTTCCAAAAAAAAAATAAAAAGGGGGGGGGGGGGGAGGAAGGGGAGGAGTA-----------------AGGTGCTATTTGGTTTTTTTCCTCAGTT .....:.x..x...:...:..x:...:.::...:...:......:.:..:.....:.-----------------.::.....:..:x....x.x.:.:x... 57M17D28M 59/85 69.4% 85/94230402 0.0% 17/85 20.0% -26463679 -67766723 +3086 chr4 + 190214555 31266416 31266415 31266488 73 TGCGCCTGTAATCCCAGCTACCCGGGAGGCTGAGGTAGGAGAATCCCTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:........::.::........x:xx.x...x.x.......:...:..x:xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -44766789 -49463613 +3384 chr4 + 190214555 31271121 31271120 31271180 60 GGTATACTTAAATGAATGATCTCTCTCT----CTCTCTCTCTCTCTATATATATATATATATAT chr4 + 94230402 81889417 81889416 81889480 81889417 81889416 81889480 64 GGTATACTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGT ..........x..x...x...:......----......:......:......x.x...:...:. 28M4I32M 50/60 83.3% 64/94230402 0.0% 4/60 6.7% -50618296 -43612106 +3030 chr4 + 190214555 31271139 31271138 31271189 51 ATCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATTTTGAAATG chr4 + 94230402 26955847 26955846 26955897 26955847 26955846 26955897 51 ATTTCTCTCTCTCTCCTTCTCTCTATATATACATATTTAAGTGACAAAATG ..:............::..............:....x..x:.xx::..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 4315292 NA +3054 chr4 + 190214555 31273648 31273647 31273710 63 TCATAATTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGGA chr4 + 94230402 50052653 50052652 50052715 50052653 50052652 50052715 63 TCATCATCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTTAAGTTGGA ....x..::..:..:.:..:.:x:x:...:x.:.:....:...............:..x.... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -18779005 -75451397 +3151 chr4 + 190214555 31288156 31288155 31288231 76 GTACGTGCCTTTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACACAGGAGGCATAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....----..:.:...........::........x.xx.x...x::.......x...:..x:x.:..:..:.. 7M4D65M 52/72 72.2% 72/94230402 0.0% 4/72 5.6% -44745050 -49485352 +3174 chr4 + 190214555 31288303 31288302 31288352 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAGAGGACTCC chr4 + 94230402 45573321 45573320 45573370 45573321 45573320 45573370 50 AGAAGAAAAAAAAAAAAAAAAAAAGCAAATACAAAGGTACAGAGGCCTTC .:..:...................:x...x.x....:........x..:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -14285018 -79945384 +3833 chr4 + 190214555 31303219 31303218 31303308 90 GATTATACAAAACAGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGTAGGCGGAGGTTGTGG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.....x.:::.::..:.--....:.:...........::........x.xx.x...x.............x..x:xx:..:...:. 21M2D67M 63/88 71.6% 88/94230402 0.0% 2/88 2.3% -44729971 -49500431 +3118 chr4 + 190214555 31315414 31315413 31315467 54 CCTCTACCACCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 51591930 51591929 51591982 51591930 51591929 51591982 53 CCTCT-CCACCTTCTCTTTCTGATTGTTTTTTTTTTTTTTTTTCCTTTCTGAAA .....-.........:...:.xx..x.................::...:...:. 5M1D48M 44/53 83.0% 53/94230402 0.0% 1/53 1.9% -20276516 -73953886 +3040 chr4 + 190214555 31352563 31352562 31352622 60 ACACACACACACACGTGTGTGTGTGTGTGTGTGTCTGGCTTACATGTTTTATATAATGTC chr4 + 94230402 44243269 44243268 44243319 44243269 44243268 44243319 51 ACACACACACACACGTGTGTGTGTGTGTCTGTGT---------ATATATGATTTAGTGTC ............................x.....---------..:.x.x..x..:.... 34M9D17M 45/51 88.2% 51/94230402 0.0% 9/51 17.6% -12890706 -81339696 +3281 chr4 + 190214555 31368463 31368462 31368574 112 TCTCTCTCTCTCTCTCTCTCTGTTCTCTTTTGTTGTTGTTGGATGTTGGATCTTAAATGCATGCAACTGAATTTTTTTATTTGAAC---------TCTGGTTTTTAATACATCATCATTTT chr4 + 94230402 153469 153468 153575 153469 153468 153575 107 TTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTTGTTGT-TGTCG------------CTGTAAATTATTTTTTTTTTTTGACCAGCCTTTTTACTGGATTATAATAAAACA-CATTTT .:.x.................x..:.:..............x-...:.------------x..:..x.x.x.......x.....x.---------x....x..x.....x.x..-...... 42M1D5M12D26M9I19M1D6M 79/98 80.6% 107/94230402 0.0% 23/98 23.5% 31214994 NA +3098 chr4 + 190214555 31370175 31370174 31370257 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAATCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::........x.xx.x...x::......:.::.:..x.xx:..:..:.. 8M2D73M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -44663022 -49567380 +3056 chr4 + 190214555 31405217 31405216 31405275 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -44627989 -49602413 +3387 chr4 + 190214555 31421483 31421482 31421588 106 AGAGAAAGTGTGTGTATATATATAATATATATATATACACACACACATATATATATATAAGTTTTATATTTAGGCCTATTTAAGAGAGCACAAACAGACTATAGTG chr4 + 94230402 67665809 67665808 67665902 67665809 67665808 67665902 94 AGACAAAGGTTTTGTA-ATGTGTAATATATACATACACACACACACATATATATAAATTAACTTAGT-----------TTCAAAAAACTACTCCCAGAGTACAATG ...x....xx.x....-..:.:.........:...:...................x..x.::..x:.-----------..:..:.:.x:..xxx....x..:.:.. 16M1D50M11D28M 69/94 73.4% 94/94230402 0.0% 12/94 12.8% -36244326 -57986076 +3012 chr4 + 190214555 31428739 31428738 31428800 62 TATATATATATACACATATATATTGTGTATGTGTATATGTATATACAGAAATATAAAAGGAA chr4 + 94230402 22934832 22934831 22934893 22934832 22934831 22934893 62 TATATACATACATATATATATAGTGTGTGTGTGCATATAGAGAGAGAGAGAGATTAAAAAAA ......:...:.:.:.......x.....:....:....:x.x.x.x...:.x..x...::.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 8493907 NA +3405 chr4 + 190214555 31460967 31460966 31461067 101 CATGGTGGTTCATGCCTGTAATCCCAGCTAGTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGTGGCAGAGGTTGCGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::.....x..:.--....:.:.......x...::........x.xx.x...x.............:x.x:xx:..:..::.------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% -44572230 -49658172 +3068 chr4 + 190214555 31483968 31483967 31484022 55 AAAAAAAAAAAAAAAGAAGAAGAAAAAGAAAAAGAAAAAAAAGTACAGAATAGCT chr4 + 94230402 17691367 17691366 17691421 17691367 17691366 17691421 55 AAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAAAAGCT ...............:.....x.x...x...x..::.:...::...x...x.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 13792601 NA +3071 chr4 + 190214555 31496150 31496149 31496213 64 AAAAAAAAAAAAAAAAAAAAAAAGCAAATAAACAAAATATCCTCTTTATATTTACTTTCCTCCA chr4 + 94230402 28086955 28086954 28087018 28086955 28086954 28087018 64 AAAAAAAGAAGGAAAAAAAAAAAGCAGGGAGACAAAAGAGCTGTCTTGCCTTTATTTCACTCCA .......:..::..............::x.:......x.x.:x::..::x....:..:x..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 3409195 NA +3464 chr4 + 190214555 31519786 31519785 31519868 83 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAATCCGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:...........::........x.xx.x...x:::.....:..:.:..x.xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -44513411 -49716991 +3141 chr4 + 190214555 31544388 31544387 31544456 69 CTTCCCTTTTTATATATGTGTTTATCTATATATATATGTTTATATATATATATATAGAGAGAGAGAGAG chr4 + 94230402 27005970 27005969 27006038 27005970 27005969 27006038 69 CTGCCTTTTTTGTCACTTTATTAGGCTATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ..x..:.....:.xxx.x.:..x:x............x.x.....x.....:...xx:........... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 4538418 NA +3027 chr4 + 190214555 31544430 31544429 31544474 45 TATATATATATATAGAGAGAGAGAGAGAGACAGAGAGAGAGTCAG chr4 + 94230402 84631452 84631451 84631496 84631452 84631451 84631496 45 TATATATATATATAGAGAGAGAGAGAGATACAGTGACTATGTCAG ............................x....x..xx:x..... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -53087022 -41143380 +3710 chr4 + 190214555 31544501 31544500 31544629 129 AGCTATATATAATGTGTGT-ATATATATAAACTCCCATATATATATGT-----ATACACACATACATATATGTATATATATGTATGTGTGTATACATATATATGTATACACACATATATATAGCCTACTAGTTCT chr4 + 94230402 43288432 43288431 43288566 43288432 43288431 43288566 135 AGCAATTCATAATGGAAGCCACAAAGATAAAGTAGAATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGACTAACATGCTTAAAGCCTAACAGTTCT ...x..x:......x:x.:-.:.x.x.....x.xxx...::...:.:.-----...:.:....::...x...:......:...x....::....:.x.x..x.:x.x..xx....::x..x......x:...... 19M1I28M5I82M 86/129 66.7% 135/94230402 0.0% 6/129 4.7% -11743931 -82486471 +3503 chr4 + 190214555 31544545 31544544 31544652 108 TGTATACACACATACATATATGTATATATATGTATGTGTGTATACATATATATGTATACACACATATAT----ATAGCCTACTAGT---------------TCTCTCCCTCTAGAGAACCCTAATAC chr4 + 94230402 5214245 5214244 5214371 5214245 5214244 5214371 127 TGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACATCCTGCCAGCACCACAGGAATCTGAGCTCTCCCCGTGGAGAGCCCTGGCAC ...x.:......:.:x..::.....::..x..:........:::..x.::.:...:.:..::..x..:.----.:.x...:.:..:---------------x.......:x.:....:....:::.. 69M4I13M15I26M 71/108 65.7% 127/94230402 0.0% 19/108 17.6% 26330300 NA +3425 chr4 + 190214555 31544547 31544546 31544615 69 TATACACACATACATATATGTATATATATGTATGTGTGTATACATATATATGTATACACACATATATAT chr4 + 94230402 41749096 41749095 41749164 41749096 41749095 41749164 69 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCAT ....:.x...:.......x..x.....xx.......:....::...:...::.:...:.x:....x:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -10204549 -84025853 +3373 chr4 + 190214555 31586465 31586464 31586547 83 AGTGGTGGCGAGCACCTGTAGTCCCAGCTACTCGGGAGGCCGAGGTCACAGAATCTCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----...x......:.........:.::....:...x:.xxx...x.x........::....x.xx:..:..:.. 7M5D71M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% -44446735 -49783667 +3407 chr4 + 190214555 31593164 31593163 31593242 79 TTTTAATCTTCTTTCTTTTCTCCT------TCCTTCCTTCCTTTTTCTCTTTCTTTTTCTTTCTTTCCTCTCTTTCTCTCTCTTT chr4 + 94230402 86491058 86491057 86491142 86491058 86491057 86491142 85 TTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCT ...:...:..:...:....:.::.------...:::.:.x.x................:....:::..:.:..:.x.:.:..::. 24M6I55M 54/79 68.4% 85/94230402 0.0% 6/79 7.6% -54897894 -39332508 +4013 chr4 + 190214555 31593173 31593172 31593307 135 TCTTTCTTTTCTCCTTCCTTCCTTCCTTTTTCTCTTTCTTTTTCTTTCTTTCCTCTCTTTCTCTC--TCTTTGTTTCCTTTCTTTCTT-----------------TTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTT chr4 + 94230402 50176273 50176272 50176426 50176273 50176272 50176426 154 TCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT ...:x..x:.......:.......:x.::x:.:x:..:.x:x.:x.......:x:.....x.x.:--.:.....:.:...........-----------------..:.:.:x::.:...::..........:.:.x.....:x:x.x...:.. 65M2I21M17I49M 88/135 65.2% 154/94230402 0.0% 19/135 14.1% -18583100 -75647302 +3364 chr4 + 190214555 31593213 31593212 31593349 137 TTTCTTTCTTTCCTCTCTTTCTC-----TCTCTTTGTTTCCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTC----TTTCTTTCTTTTCTTTCTTTCTCTCTTT chr4 + 94230402 24483451 24483450 24483596 24483451 24483450 24483596 146 TTTCATTTTCTACTATTTATTCCAGATTTCTTTTAATGTATTTTTTATTTTTACTGTTACCTTCCTTCTTACTTGCTATTTATAGTTAATTTCTTCCTTTCTTTATATACTTTCAGAGTTTCAACCATTTTTTTCCTGCTATGTTT ....x..:.:.x..x.:.x.::.-----...:..x:.x.x:...:.x.:...x..x.:x.:...:.....x...x..x...x.xx:.xx..::...........x.x.x.....----....xx:.x...:....:.x..x.x... 23M5I86M4I28M 90/137 65.7% 146/94230402 0.0% 9/137 6.6% 7109762 NA +3595 chr4 + 190214555 31593242 31593241 31593353 112 TGTTTCCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCTTTCTTT chr4 + 94230402 61949697 61949696 61949805 61949697 61949696 61949805 109 TGGCCCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATC---CTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTT ..x::.:.......xxx:...x::x..x.x:.:.....x.x...:x..---...x........xx.x:...................:....:...xx.xxx..:..x.... 48M3D61M 75/109 68.8% 109/94230402 0.0% 3/109 2.8% -30356455 -63873947 +3269 chr4 + 190214555 31593271 31593270 31593347 77 CTTTCTTTCTTTCTC-----TTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCT chr4 + 94230402 69568192 69568191 69568273 69568192 69568191 69568273 82 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT .....:..x:.x...-----....:.:....x...:....:.x.:.......:.:x:...xx......:...:...:.:.:. 15M5I62M 55/77 71.4% 82/94230402 0.0% 5/77 6.5% -37974921 -56255481 +3061 chr4 + 190214555 31593276 31593275 31593334 59 TTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTC chr4 + 94230402 6626816 6626815 6626874 6626816 6626815 6626874 59 TTTCTTCATCTTTCCCTGTCTTTCATACCTCTCTTTCTTTCCTCTGCCTCTTTTTTTCC ......:x......::.x.:....x.x...:.........:..:.x::.....:...:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 24966460 NA +3077 chr4 + 190214555 31621184 31621183 31621221 38 CGCTGTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601302 12601301 12601339 12601302 12601301 12601339 38 CGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ....x................x.....:.......... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 19019882 NA +3270 chr4 + 190214555 31621186 31621185 31621225 40 CTGTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x:.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -43626863 -50603539 +3216 chr4 + 190214555 31621189 31621188 31621223 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ........................:.......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 19019884 NA +3338 chr4 + 190214555 31621189 31621188 31621223 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248054 75248053 75248088 75248054 75248053 75248088 35 TCTCTCTCTCTCTCTCTCACACACACACACACACa ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% -43626865 -50603537 +3102 chr4 + 190214555 31621190 31621189 31621225 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 19019886 NA +3309 chr4 + 190214555 31629345 31629344 31629411 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........:..:..x.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -44403866 -49826536 +3156 chr4 + 190214555 31676262 31676261 31676317 56 TTGGTGGTCTCAATCCATGCTAGGAAAAAAAAAAAAAACAAAACAAAACAAAACAA chr4 + 94230402 93850950 93850949 93851005 93850950 93850949 93851005 56 TTGAAGATTTCAGTCTCTCCTCAGAAGAAAAAGAAAAACAAAACAAAACAAAAAAA ...:x.:.:...:..:x.x..x:...:.....:....................x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -62174688 -32055714 +3313 chr4 + 190214555 31676274 31676273 31676346 73 ATCCATGCTAGGAAAAAAAA---------AAAAAACAAAACAAAACA-AAACAACAACAACAACAAAAAAAAAACAACTGTGT chr4 + 94230402 4563779 4563778 4563861 4563779 4563778 4563861 83 ATTTATGGGGGAGAAAAAAATTGTTTTCTAACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAACTCTGT ..::...xx:.::.......---------..x...x....x....:.-.....:...................x.....x... 20M9I18M1I35M 59/73 80.8% 83/94230402 0.0% 10/73 13.7% 27112495 NA +3031 chr4 + 190214555 31676284 31676283 31676339 56 GGAAAAAAAAAAAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAAACA chr4 + 94230402 25229687 25229686 25229742 25229687 25229686 25229742 56 GAACAAGCAACAAAAATAACCCAAACCAAAACAACAACAGCAACAAATAAAATACA .:.x..:x..x.....:..xx....x.............:.......x....x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 6446597 NA +3229 chr4 + 190214555 31676284 31676283 31676337 54 GGAAAAAAAAAAAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAAA chr4 + 94230402 58371509 58371508 58371562 58371509 58371508 58371562 54 GAAAAGAAGGAGAAAACAAAACCAAATAAAACCACCACCACAACAACAAAAAAA .:...:..::.:..........x...:.....x..x..x.......x....... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -26695225 -67535177 +3134 chr4 + 190214555 31676285 31676284 31676339 55 GAAAAAAAAAAAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAAACA chr4 + 94230402 78781376 78781375 78781430 78781376 78781375 78781430 55 GAAATGAAAACAACAGAGCAAAAAACAAAGCAACAACAACAGCAAAACAAAAACA ....x:....x..x.x.:x.x........:...........:.....x....... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -47105091 -47125311 +3558 chr4 + 190214555 31676289 31676288 31676338 50 AAAAAAAAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAAAC chr4 + 94230402 49372041 49372040 49372090 49372041 49372040 49372090 50 AAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAAC .......x........x.x....x....:..:.................. 50M 44/50 88.0% 50/94230402 0.0% 0/50 0.0% -17695752 -76534650 +3499 chr4 + 190214555 31733998 31733997 31734070 73 CTTAGCAAGATAT----TTAACTACTTCTACCAAAAAATGACTGTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 134302 134301 134376 134302 134301 134376 75 CTCAGAAAAATATGAAATTACATACTTTTTTCAAAA--CTACTGTTTTTTTTTTGGTTTTTTTGTTTTTTTTTGTTT ..:..x..:....----...xx.....:.x:.....--:x.......................x.........x... 13M4I19M2D39M 59/71 83.1% 75/94230402 0.0% 6/71 8.5% 31599696 NA +3033 chr4 + 190214555 31734018 31734017 31734079 62 CTTCTACCAAAAAATGACTGTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 15130519 15130518 15130580 15130519 15130518 15130580 62 CTTTTAGTAAATCATTGTTGGGTTTTTCTTGGTTTTTTTTTTTTTTTTTCCTTTCTAATTTG ...:..x:...xx..x::..xx.....:.....................::...:.xx.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 16603499 NA +3411 chr4 + 190214555 31749313 31749312 31749566 254 CCTCCCTCCCTTCCTGCC-TTCCTGCCCCTCTCTCCACTTTCTTCTTTCTCTTTCTT--------TCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTT--------------TCTTTCT------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTC----------------------------CGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCCCTCCTTCATTTTCTTTCATTCCTTCTTTCTTTCCGTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 34797079 34797078 34797389 34797079 34797078 34797389 311 CTTCCTTTCTTTGCTGCCCTTACTGATCATTTCTCTAACTCCCCCCCCCCCCTTTTTAAACAAACTGTTGCACCTGTATTGGGTTTTTTTTTGCATCCATTTTTGCTAAGGATGTTGCGTTATCTTCCTACAGCACCCTAAATCTTCTTCACACTGTTATTCTTCTTGTTCAAAAGCAAAACATTGTATGTGAATATAATGTAGTTCTGTTTTTCCTTTTTTTTCATTTTTCTTTCTCTTTCTTCCTCTTCCCAGTCTGCATTCCCATTCCATACACAAGCACTGCTGACTCTGTTCCCTCTTGTTTTTCT .:...:.:.:..x.....-..x...x:.x.:....:.x:.:.::.:::.:.:..:..--------.x..x.x.:.x.x:.xxx..:...:..x.x.:.x..:..x..x--------------....:..------::..xxx.:.::...x:x..x.:x.....:..x...----------------------------:..xx...:x.::........:....x.:...........:..::.:....:..xx:..x....::.x...xx.x.x:xxx:x:.x.:.x..:.x..:.:.::.x.:..... 18M1I38M8I43M14I7M6I36M28I112M 152/254 59.8% 311/94230402 0.0% 57/254 22.4% -3047766 -91182636 +3055 chr4 + 190214555 31749338 31749337 31749438 101 CCCTCTCTCCACTTTCTTCTTTCTCTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...x.x:...x:.x.::x.:x...:.x.......xx.:.::.......:.::..:x..:xx:...x.::..x:x.:.....x.....::..::.:...... 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% -51577590 -42652812 +3181 chr4 + 190214555 31749339 31749338 31749434 96 CCTCTCTCCACTTTCTTCTTTCTCTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326936 83326935 83327028 83326936 83326935 83327028 93 CCTTTATTCAC---CATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:.x.:...---.x.....x.......xx.:::..:.:.....:...:x..:xx:...x.::..x:x.:.....x.....::..::.:...... 11M3D82M 61/93 65.6% 93/94230402 0.0% 3/93 3.2% -51577597 -42652805 +3612 chr4 + 190214555 31749356 31749355 31749511 156 CTTTCTCTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTT----CCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCCCTC chr4 + 94230402 19215406 19215405 19215565 19215406 19215405 19215565 160 CCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTC .:::.:.:.:.:::.:::..:.....:.....xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x......::.:.x.:.:..----.:.::...xx....:....x:...x:x:.:.:.:x.:..:.x:... 110M4I46M 89/156 57.1% 160/94230402 0.0% 4/156 2.6% 12533950 NA +4001 chr4 + 190214555 31749362 31749361 31749479 118 CTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCT--CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..--...:...:.xx.x..:.:.....:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx.....:...:..x..:..:...:.........:x.. 10M2D55M6I51M 80/116 69.0% 122/94230402 0.0% 8/116 6.9% -31947755 -62282647 +3004 chr4 + 190214555 31749373 31749372 31749458 86 TCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCCGTC chr4 + 94230402 86491058 86491057 86491143 86491058 86491057 86491143 86 TTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTC .:..xx...:......:...:....xxxx..:.::..:.x.x..:.:.........:...:.::.:::.:::::.x..:....x.. 86M 53/86 61.6% 86/94230402 0.0% 0/86 0.0% -54741685 -39488717 +3961 chr4 + 190214555 31749373 31749372 31749489 117 TCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTT chr4 + 94230402 63697118 63697117 63697235 63697118 63697117 63697235 118 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .:.x..::...::....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.-..xxx:....x:....::x.x...:...::...:::.............:..:.. 62M1I55M 75/117 64.1% 118/94230402 0.0% 1/117 0.9% -31947745 -62282657 +3588 chr4 + 190214555 31749389 31749388 31749524 136 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCCCTCCTTCATTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTAC--------------TTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xx.:.:..x.--------------..:...x:xx.:.:..........::....::..:.:.x....x... 13M1I62M14D47M 81/122 66.4% 123/94230402 0.0% 15/122 12.3% -31947728 -62282674 +3133 chr4 + 190214555 31749437 31749436 31749507 71 CTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTC chr4 + 94230402 57372026 57372025 57372096 57372026 57372025 57372096 71 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTC ....:.:.:..:..x.:..xx:.:......:::.:..xx..x::x.:................:.x..... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -25622589 -68607813 +3681 chr4 + 190214555 31749511 31749510 31749655 145 CCTTCATTTTCTTTCATTCCTTCTTTC---TTTCCGTCTTTCTTTCTTTCTTTCT------------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTT----TCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTCTTTTT chr4 + 94230402 64726422 64726421 64726585 64726422 64726421 64726585 164 CCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ...x....:.::.....:.:..x:.::---...:.xxx..::..x..:.x..:..------------.x.:..::.x...x:.x..x..:x.x:.::x........:....:x.----.:...:....:..::.:x:....:.....:..:..::.:....... 27M3I25M12I47M4I46M 92/145 63.4% 164/94230402 0.0% 19/145 13.1% -32976911 -61253491 +3900 chr4 + 190214555 31749523 31749522 31749646 124 TTCATTCCTTCTTTCTTTCCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTC--TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:......:--.:.......x:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....:.:x.xx.......:..:::::..:.:.:...::..:...x.:. 10M2D112M 76/122 62.3% 122/94230402 0.0% 2/122 1.6% -31947595 -62282807 +3195 chr4 + 190214555 31749533 31749532 31749649 117 CTTTCTTTCCGTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:.:x..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::..x....:.:x.xx.......:..:::::..:...:...:::.:.:.x.. 18M5I99M 70/117 59.8% 122/94230402 0.0% 5/117 4.3% -31947584 -62282818 +3647 chr4 + 190214555 31749545 31749544 31749657 113 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTCTTTTTTT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx...:.x....xxx:::..x....:.:x.xx..........:.:::..:...:.::.::.... 18M5I95M 71/113 62.8% 118/94230402 0.0% 5/113 4.4% -31947572 -62282830 +3602 chr4 + 190214555 31749547 31749546 31749656 110 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTCTTTTTT chr4 + 94230402 63697128 63697127 63697235 63697128 63697127 63697235 108 TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTT .:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx:::..x....:.:x.xx......--....:.::::.....:.....:..... 81M2D27M 70/108 64.8% 108/94230402 0.0% 2/108 1.9% -31947581 -62282821 +3761 chr4 + 190214555 31752214 31752213 31752283 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGTAGGGGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:............:........x:xx.x...x..........::.:.. 10M2D58M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% -44280983 -49949419 +3172 chr4 + 190214555 31752670 31752669 31752708 39 TTCATCTCAAAAAACAAACAAACAAACAAAAACTGTAAT chr4 + 94230402 26069038 26069037 26069076 26069038 26069037 26069076 39 TTCCTTTCAAAAAACAAACAAACAAACAAAAACCGTAAT ...x.:...........................:..... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 5683632 NA +3686 chr4 + 190214555 31753849 31753848 31754046 198 CACAGCTATATACATTTTAACATTCTATTTGGAAACCTAAACTAGGAAAACAAATTGCAGTCAGCTTTTTTATTCTTCTTTATAAT--------ATGAAGAGGTTTTATATATATATATATATATATATATAT----ATATATATATACACACACACAT------ATATATATACACACACATATATATATACACACATATATATACACACATATA chr4 + 94230402 46140706 46140705 46140906 46140706 46140705 46140906 201 CAGATCTATATACTTTTTATTTTTCTC--------------ATAACAAATCAAGCTGCTGTGCTCTGTTCTCTTTTTGTATCTAGTCTCTCACAGTGGTACAGTTTTACAGATATGTGTGCATTCAAATGTATTGCAATAAATGT-TACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ..x.x........x.....x:x....x--------------x..:x...x...::...x..xxx..x..:.x..:..x.x.x..:.--------:..:x:x:......:.x....:.:.::..x:.x..:...----...x..:.-.....xxx:.:x.------................x:x:.:...:......:.:........x..x..:. 27M14D45M8I39M4I8M1D13M6I51M 123/183 67.2% 201/94230402 0.0% 33/183 18.0% -14386857 -79843545 +3060 chr4 + 190214555 31754026 31754025 31754076 51 ACATATATATACACACATATATATATATACACACACACACATATATATATA chr4 + 94230402 12852056 12852055 12852106 12852056 12852055 12852106 51 ACAAATCTGTAAACGCATATATGTATGCACACTCACACACATATATATTTA ...x..x.:..x..:.......:...::....x...............x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 18901970 NA +3018 chr4 + 190214555 31781502 31781501 31781589 88 ATACATTTATTTTTTCTTTCTTCTGCTTTTTTCTTTTTCTTAATAGTTTTATTTAACCTATGAATTTATGTTTATAAAATCCACTTTA chr4 + 94230402 93833596 93833595 93833683 93833596 93833595 93833683 88 ATGCATTTCTTTTTTTTTTCTTCTCATGATTTCTTTCCCTTATTAGTTTCTCTCTCTTTCTTGGTGTGTGTTTATATGAACATTTTTA ..:.....x......:........xx.xx.......::....x......:x:.:xx::.x.x::.x.:........x:.x.xx:.... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -62052094 -32178308 +3299 chr4 + 190214555 31782022 31782021 31782067 46 GGAGAGGAGGAGGGGGAAAAGGAGGGCAAAAAAAAGAAAAACAAAA chr4 + 94230402 73633585 73633584 73633630 73633585 73633584 73633630 46 GGGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAA ..:.:..:...............:..x........:.....x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -41851563 -52378839 +3007 chr4 + 190214555 31784519 31784518 31784577 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATGTACATGTATAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....x.................:.xx:...:x.::.::...::..x:.......x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -54050022 -40180380 +3262 chr4 + 190214555 31784522 31784521 31784600 79 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATGTACATG------TATATATTTCCAGCAATATTTATATATA chr4 + 94230402 79265519 79265518 79265602 79265519 79265518 79265602 84 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA-CAACACCTCTATATA .............::........xx...:.:.:::..:..:.:..:...:.------...x.:.x....-...:.::.x...... 51M6I12M1D15M 57/78 73.1% 84/94230402 0.0% 7/78 9.0% -47480997 -46749405 +3119 chr4 + 190214555 31784523 31784522 31784569 47 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATGTAC chr4 + 94230402 65759992 65759991 65760038 65759992 65759991 65760038 47 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTAC ....x..:...:........::.:::...x................. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -33975469 -60254933 +3266 chr4 + 190214555 31784523 31784522 31784613 91 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATGTACATGTATATATTTCCA--------------------GCAATATTTATATATATTTATATATTCCA chr4 + 94230402 85834541 85834540 85834651 85834541 85834540 85834651 111 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCA .....x.................:.xx:...:x.:...........x..::..:.x.x.x..--------------------.x...x..:x.x.:...x..:.x...... 62M20I29M 67/91 73.6% 111/94230402 0.0% 20/91 22.0% -54050018 -40180384 +3041 chr4 + 190214555 31784532 31784531 31784597 66 GTGTGTGTGTGTGTGTGTGTGTGTGTATACATATGTACATGTATATATTTCCAGCAATATTTATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx.:..:...::....:..:.::.:x:x..:xx......:.:. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -47480987 -46749415 +3310 chr4 + 190214555 31805618 31805617 31805858 241 TAAGGCATTGTTTTATAGTAAGTTATATACAAGTTTTATACTTTTACCATATGAAAACATTTCTCTGACTAGATAATGTATGCCAGTG----TCTATAAATGTTTATATATTTTTATGATAACAGCTTTTAGATATCTTCATTTTTGTCTCACTCATCATTAGACCTGGGATAGACTTCGCAAAAACAAAACAAAACAAA-ACAAAACAAAACAAAACAAACAAAAAACAAAACCAAGAAACAAGA chr4 + 94230402 55865253 55865252 55865448 55865253 55865252 55865448 196 TGAAGAATTGTCTGAAACTA-GTTA---ATAGGTTTCATATTTTCACCATATGGCAA-GGCTATGTGTTTAAGTAA---ATGCAATTGGAAATCTATAGGCAATTATGATTTCCTCTAGTAAATGATC----AAATTCTCCTTTT--------------------------------------AAAAAAGAAAAAACAAACACCAACCACACCAAAACAAACAAAACACACAACCAAACAACAAGA .:.:.x.....:.x.x.x..-....---.:.:....:...:...:........:x..-:x:.x.x..x:..::...---....x.x..----......::::x....:xx..::.x.::...xx.x.:----.x..::..x....--------------------------------------...x..:.x........-..x..x..x.x..............x...x......:x....... 20M1D4M3D29M1D18M3D9M4I36M4D13M38D17M1I45M 134/191 70.2% 196/94230402 0.0% 55/191 28.8% -24059635 -70170767 +3632 chr4 + 190214555 31808582 31808581 31808653 72 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAAGAGAATCACTTGAACCTGGAAGGCGGGGGTTGCGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.xx.x...x..........::....x:xx...:..::. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -44224624 -50005778 +3110 chr4 + 190214555 31817238 31817237 31817337 100 TATGTAACATATTATATATAACATATATAATATATTATATATGATATCTAATATATTATATATGATATATCTAATATATT--ATATATGATACATTATATAT chr4 + 94230402 71903459 71903458 71903558 71903459 71903458 71903558 100 TATCGAATGTATTATATATGAAATGTTAGGTATTTTAATCATCATATGTATTATGATTTATATA--AGATTAAACATGTTACATATATAATGCATTATATAT ...xx..::..........:.x..:.xx::...x...xx:..x....x..x...:x.x.....:--.x..:x..:..:..--......:..:.......... 64M2D14M2I20M 69/98 70.4% 100/94230402 0.0% 4/98 4.1% -40086221 -54144181 +3731 chr4 + 190214555 31817560 31817559 31817673 114 ATATATAATTAATATAATATAATATTATATATAATATAATATTATATAATATTATATTATATATATTATAAAATATTATATATATATTATAC---ATAATATTATATTATATATTAT chr4 + 94230402 78074644 78074643 78074752 78074644 78074643 78074752 109 ATATGTAATTTATATAAT-------TGTATATTGTATGATAGTATATAGATGTATATTATATACTTTACTGTATATTATAAATTTACAATACTGTATAATA-TATACTTTAGCTTAT ....:.....x.......-------.:.....x:...:...x......:xxx...........:x...:x:x........x..x..:x....---......-....:.x..xx.... 18M7D67M3I6M1D15M 81/106 76.4% 109/94230402 0.0% 11/106 10.4% -46257084 -47973318 +4035 chr4 + 190214555 31817854 31817853 31818009 156 ATTATATAATATATGTTATGT---------ATATTATATAATATATA-----TTATGTATATTATATAATATATATT---ATATATAATATATATTATATATTATGTATAATATATAATATATATTATGTACAATATATAATATATATTATGTACAATATATAATATATGTTA chr4 + 94230402 46018777 46018776 46018945 46018777 46018776 46018945 169 ATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA---GTCGTATGTATAG-ATATGATAAAGGTTA ...x.x...x.:..x......---------...:.::...x:..x:.-----.:..:x..xx.....::.....::.---......:...x....x::....x..:.....x.x........:.x..::..x.......x.---:.xx......:.:-....:...x.x.... 21M9I17M5I25M3I61M3D13M1D15M 108/152 71.1% 169/94230402 0.0% 21/152 13.8% -14200923 -80029479 +3468 chr4 + 190214555 31818339 31818338 31818485 147 TGTATTATGTATAATATGTATACT---ATATATT---ATGTATAATATATATTATACATA---TTATGTATAATATATATAATACATATTATTTATAATATATATTATGTATAATATATATTATGT-----ATAATATATATTATGTATAATATATATTAT chr4 + 94230402 26320189 26320188 26320343 26320189 26320188 26320343 155 TGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGT-TGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAAT-----ATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAAT ...:.:..xx....x..:.x.x..---..:....---....-.:....x..x.xx:.x..---....x.xxx..:......x..........x....x......:x..-----....x........-----...:.....x..xx....x:.....:.x.. 24M3I7M3I4M1D18M3I45M5D13M5I30M 106/141 75.2% 155/94230402 0.0% 20/141 14.2% 5498150 NA +4122 chr4 + 190214555 31818815 31818814 31818973 159 ATAAAATATATTATACAGAATATATATAATAGATATATTATATATAATA----TATACATATAGTATATATAATATATTATATATTATATATAATATATGTAATATATATATTATTTATATAATATATGTAATATATATATTATTTATATAATATGTATAACA chr4 + 94230402 26320199 26320198 26320344 26320199 26320198 26320344 146 ATAAAATATTTTCT------TATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTA-TATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----------GTATATTTTTAGTATTGTATATGTAATA .........x..x.------.....:..x.x:.xxxx.x....x....x----..x.:x...xx:.:..:..-....:..:............x.....::.......x......x...x.....----------:......x..x:...x:...:.:...:. 14M6D29M4I19M1D52M10D28M 104/142 73.2% 146/94230402 0.0% 21/142 14.8% 5498616 NA +4069 chr4 + 190214555 31819082 31819081 31819291 210 GTATAAGATATATAGTATATATTATATGTAT-----ATAAGATATATATAATATACTATATATGTTATATATATTATATATAACATATATAATATATATAATATACTATATATGTTATA-----------TATATTATATATAACATATATA---ATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATATTATATTATATATAAAA chr4 + 94230402 63976768 63976767 63976993 63976768 63976767 63976993 226 GCATAAGAT-CAAATTGTCTAATGTCTGTGTTTAGTATGAGAACTTGATCAGAAGGTATAAATATTAAATGACTTCTATTTTTAAATGATGATAC-TATTACATACTTTATCCTTTATAGCAAATGCAGATGTATAA-ACATAAGATAAAGACATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACAATATACATGTAA .:.......-:.x.x.:.x..x.:.x...:.-----..:...xx.xx..x.x.x:x....x..:...x..:xx..x...x.xxx.xxx..:...:-...x.:.....x...x:x.....-----------.:...x.-.:....x...x.x.---.:....:......::xx.::.......:...::...x...........:..:....x...:.x....:..:x.. 9M1D21M5I59M1D23M11I7M1D14M3I74M 139/207 67.1% 226/94230402 0.0% 22/207 10.6% -32157686 -62072716 +4161 chr4 + 190214555 31819147 31819146 31819285 139 ATATTATATATAACATATATAATATA-TATAATATACTATATATGTTATATATATTATATATAACATATATAATATATATAATATATATTATATATATTATATAATATA-------TATAATATATATTA-TATATATTATATTATAT chr4 + 94230402 73633764 73633763 73633911 73633764 73633763 73633911 148 ATATCACATTGTAGAGATATAAGACAACATCAAATATTAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaattattaaatattatttCACGT ....:.:..xxx.x.x......x.:.-:..x.x...:..x.:x.x.x.xx.:..:.x..........x..:.xxx....:................:..x.....x:..-------.......:.x....-..x.......x.:.::. 26M1I82M7I14M1I17M 99/139 71.2% 148/94230402 0.0% 9/139 6.5% -41814617 -52415785 +3291 chr4 + 190214555 31819193 31819192 31819279 87 ATATATATTATATATAACATATATAATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATATTATA chr4 + 94230402 26320260 26320259 26320344 26320260 26320259 26320344 85 ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTT--TTAGTATTGTATATGTAATA ..:.....xx..:...x:.......x......:.......x.xx...:...:xx...:.....x.--.xx:....:.....:.x... 65M2D20M 62/85 72.9% 85/94230402 0.0% 2/85 2.4% 5498933 NA +3323 chr4 + 190214555 31819209 31819208 31819293 85 ACATATATAATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATATTATATTATATATAAAATA chr4 + 94230402 26320260 26320259 26320344 26320260 26320259 26320344 85 ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .::......x..:....x.......:......:.x.....xxxx...:..x:xx...x.....x.x.x:....:.....:x.... 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% 5498949 NA +3553 chr4 + 190214555 31832570 31832569 31832723 154 ATATATATAATATATATTATATATATTATAT--AATATATATAATATATATTATATATAATA-------TATTATATATATAATATA------------TATTATATATATTATATATAATATATAATATATATAGTATATTATATATAATATATAATATATATAGTATATTATA chr4 + 94230402 26320260 26320259 26320433 26320260 26320259 26320433 174 ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTAGTATGAAAAAT-TAAGTGTGATTTTATTCCTAAAATGTAAAAGAGACAATACAGTGCA ..:......x..:............:.....--.......x..x...:...:xx...xx...-------....:.....:.....x.------------:....:.x..x:.x.x..xx..:x.x...-..x:.:xx..x....x:x...x..:...x.x.x.:.:..:.x.::. 31M2I29M7I18M12I29M1D46M 106/153 69.3% 174/94230402 0.0% 22/153 14.4% 5512310 NA +5436 chr4 + 190214555 31832570 31832569 31832723 154 ATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATAATATATTATATATATAA--------TATATATTATATA------TATTATATA--TAATATATAATATATATAGTATATTATATATAATATATAATATATATAGTATATTATA chr4 + 94230402 63976920 63976919 63977089 63976920 63976919 63977089 170 ACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACAATATACATGTAAATTTTAACTATAGACTATATACTACAGTTTTATATGACTAACataaattatttgatatttattttaaattatatatattttagacattatattata .:....:......::xx.::.......:...::...x...........:..:....xx..:.x....:..:...--------....x.:......------.x......:--...:...x.x...x.:xx:.x....x..x..x.......x.x..x.:.x......... 74M8I13M6I9M2I58M 113/154 73.4% 170/94230402 0.0% 16/154 10.4% -32144350 -62086052 +3636 chr4 + 190214555 31832578 31832577 31832676 99 AATATATATTATATATATTATATAATATATATAATATATATTATATATAATA----TATTATATATATAATA-TATATTATATATATTATATATAATATATAAT chr4 + 94230402 26320248 26320247 26320348 26320248 26320247 26320348 101 AATTTATCTCACATGTAT---ATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ...x...x.:.:..:...---...x..:....x.......:......:....----......:...x.....-......x.xx:....:.....:xx...x.:. 18M3D31M4I16M1I31M 74/96 77.1% 101/94230402 0.0% 8/96 8.3% 5512330 NA +4415 chr4 + 190214555 31832587 31832586 31832763 177 TATATATATTATATAA-------TATATATAATATATATTATATATAATATATTATATATATAATATATATTATATATATTATATATAATATATAA--------TATATATAGTATATTATATATAATATATAAT--ATATATAGTATATTATATATATTATATATAAAGATATATTATATATATTATATAATA chr4 + 94230402 63976898 63976897 63977089 63976898 63976897 63977089 192 TATAAACATAAGATAAAGACATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACAATATACATGTAAATTTTAACTATAGACTATATACTACA-GTTTTATATGACTAACataaattatttgatatttattttaaat-tatatatattttagacattatattata ....x.:..x.x....-------:....:......::xx.::.....x.:...x:...x...........:..:....x...:.xxxx.:..:...--------....x.:x:....:..:.-:.xx.....:.:--.:...x.x...x.x....x....x..x..-x.x.......x..x.:.......x... 16M7I73M8I18M1D12M2I29M1D27M 123/175 70.3% 192/94230402 0.0% 19/175 10.9% -32144311 -62086091 +4083 chr4 + 190214555 31832615 31832614 31832747 133 ATATTATATATAAT---ATATTATATATATAATATATATTATATATATTATATATAATATATAATATATATAGTATATTATATATAATATATAATATATATAGTATATTATATATATTA----TATATAAAGATATATTA chr4 + 94230402 46018807 46018806 46018938 46018807 46018806 46018938 132 ATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGC------TGTGATATATGATAAATATGGCATATAATATATAAAAGATA--ATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATA ...:.::....x..---..:x.x:...x..x:.....:x.....::------.:.:......:...x....:.:....x........x.x...--.....:....:..x:x........----...:..x......:x.. 14M3I29M6D41M2D24M4I17M 92/125 73.6% 132/94230402 0.0% 15/125 12.0% -14186192 -80044210 +3720 chr4 + 190214555 31832634 31832633 31832730 97 ATATATATAATATATATTATATATATTATATATAATATATAATATATATAGTATATTATATATAATATATAATATATATAGTATATTATATATATTA chr4 + 94230402 26320260 26320259 26320344 26320260 26320259 26320344 85 ATGTATATACTACATATTATATATACTATATACAATATA------------TTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:......x..:............:......:......------------.x......:...xxx...xx....x.x......xx.....:..x.. 39M12D46M 67/85 78.8% 85/94230402 0.0% 12/85 14.1% 5512374 NA +3023 chr4 + 190214555 31846439 31846438 31846507 69 TTATTTTTGTTCTTTAAAATATAAATAAAAATATTAAGTGTAGCGACACTATTGAAAATCATGTGGTTG chr4 + 94230402 70246318 70246317 70246386 70246318 70246317 70246386 69 TTACTTTTATTCTTAAAAAGATAATTACAAGTGCTAACTGAAGCAGCATTAAAAAAACTCACCTGGTTG ...:....:.....x....x....x..x..:.::...x..x...::..:..xx:...x...:x...... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -38399879 -55830523 +6297 chr4 + 190214555 31868396 31868395 31868755 360 TTCTTTCCCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCTTTCTCTTTCTTTCTTTCTTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCCTTCGATCCATCTTTCTTTTTCT-------------TTCTTTCTTTCT--TTCTTTCTTTCTT-----TCTTTCTTTCTTTCTTTCTTTCTT--------------TCTTTCTTCT------------TTTTCTTTCTTTCCTTCCTTCCTTTCTTCCT-TCCGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTCTTTCTCTTTCTCT-CTCTTCCT-------TCCTTCTTTCCTTCCTTCCT-----TCCTTCCTTCCTTTTCTTTCTTTCTTTTTTTCTTTTT chr4 + 94230402 7632357 7632356 7632762 7632357 7632356 7632762 406 TTATATCCCTTTCATG---TCCTTCCCTTCATCCCTACTGTCTCATTCCTTTTATTAATTGCTCTG-----CTTTTTTTCCTTCTGCCTTTTC------CTGCCTTTCTTTTTCTGCAGAAGTAAAACTTCTACTCTACTAATTCATTTTTGCTCAATCATTTTTCTTTTCTTCATTGTCTCTTGACCATATAAGTCTCCTTTCCTCTACCCCAGAGATAGTTTCTCATTTCTCTTACTTCACTTCTTGTGATATGTGTGCCCTTCCTTCTGTATCTAATTCTTTCTATGTCACATACATTCTGTCTTACTGACCCCCCTCTGCTCTTTCTTTTCATGCTCTGCTCTTTCTTTTAATGTCCTGATTGACTTCTTTCCTACAGCTTCTACATAACTCGTCCTGATTTCATTCTCTATGTCT ..x.x....:...x.x---.........:.x.....x..x....x...:..:.x.:xx.:x:..:.-----....:....:....x:....:.------.:::............-------------....x:::.x..--...x..:..x..:-----.:.......::...x..x.:....--------------:.....:...------------x.....:x:..::...x....x:.....x:x-.x:..x..:.:...:....x.x.:.xx........x.x.:x.x.x.x....x....x..xx.:::.:.::x.....::..:..x.x....-.....:..-------....xx..xx....:.....-----.:..x.x.xx..:x..:.xx....x..:.:.x.x.:. 16M3D47M5D22M6D16M13I12M2I13M5I24M14I10M12I31M1I90M1I8M7I20M5I37M 233/346 67.3% 406/94230402 0.0% 74/346 21.4% 24236039 NA +3507 chr4 + 190214555 31868414 31868413 31868655 242 TTCCTTCCCTCCCTCCCTCCT-------TTCTCTTTCTTTCTTTCTTTCCTTCCGTCTGTCTTTCTTTCTTTCTTT------CTTTCCTTCGATCC---ATCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT--TTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTTCTTTCTTTCCTTCCTTCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215305 19215304 19215566 19215305 19215304 19215566 262 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCT---TCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...::.x...:....:..x:.-------..:.x...:x..:.:.:x..xx..x:.xx.:.:::x.....x.::...------:.:...:.x.xx..---.x.:::.:::.:.:::.:::....:...:...:.--....-----......x..::...x......xxx....x.x....::xx...::...:x..:...::x::x.:.:..xx.x..---.:....xx:..:.....x:...x:x..:..::x.:..:.x.:... 21M7I48M6I14M3I34M2I4M5I73M3D45M 140/239 58.6% 262/94230402 0.0% 26/239 10.9% 12653109 NA +3279 chr4 + 190214555 31868423 31868422 31868529 107 TCCCTCCCTCCTTTCTCTTTCTTTCTTTCTTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCCTTCGATCCATCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTC--TCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ..:x..:.::......:::.x...:..:..x..x...--.....x...::.x..xx:.:.x.:xx.x..xx::..:......:.x:.x......x.....:...... 37M2D68M 68/105 64.8% 105/94230402 0.0% 2/105 1.9% -1027175 -93203227 +3011 chr4 + 190214555 31868503 31868502 31868581 79 CTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTTCTTTCTTT chr4 + 94230402 31719012 31719011 31719090 31719012 31719011 31719090 79 CCTTACCCTTCTGTCTTTCCTTCTGCCTTCCTCTTCATTTTTTGCTGACTGCTGCCCTCTGTCTTCCTTTTTTTTCTTT .:..x:.:....x......:....x:...:..:.::x.:...:x:.xx:.x:.x.::...x.....:....:....... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 149491 NA +3869 chr4 + 190214555 31868518 31868517 31868733 216 TTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTCTTTTTCTTTCTTTCCTTCCTTCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTCTTTCTCTTTCTCTCTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTT chr4 + 94230402 85792637 85792636 85792854 85792637 85792636 85792854 218 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTT--TTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTT .....:.:.......x--.x.....::..xx..:.:x.x::x....-....x....xxx:.x.....--......:..:.xxx.:.x.:x.::...x..xxxx:x:..-....x:.::....:...x:....:.:::x.x.x.x:...::x.x...:::...:xxx.::x.......x:::.x.:..x..xx.:......:...:.:.:....:.::... 16M2I28M1I20M2D39M1I111M 127/214 59.3% 218/94230402 0.0% 6/214 2.8% -53924119 -40306283 +3952 chr4 + 190214555 31868542 31868541 31868737 196 TTTCTTTCTTTCTTT---CTTTCTTTCTTCTTTTTC------TTTCTTTCCTTCCT----TCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTCTCTTCTTTCTC---TTTCTCTCTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTTCTTT chr4 + 94230402 85792637 85792636 85792854 85792637 85792636 85792854 218 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTT .....:.:.......---:x.::......xx.....------....x..:.x..:.----.x::..:......:.x::x:x...x..:.::x..x..x-----:.:x....x:.::....:...x:....:.:::x.x.-.x.:....x:x:..::.....---..:x.:.....x.::.x.:..x..xx.:......:...:.:.:....::..... 15M3I18M6I14M4I38M5I36M1I21M3I54M 124/196 63.3% 218/94230402 0.0% 22/196 11.2% -53924095 -40306307 +3707 chr4 + 190214555 31868550 31868549 31868699 150 TTTCTTTCTTTCTTTCTTCT---TTTTCT--TTCTTTCCTTCCTTCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTCTCTTCTTTCTCTTTCTCTCTCTTCCTT chr4 + 94230402 64726429 64726428 64726583 64726429 64726428 64726583 155 TCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCT--CGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTT .:.::...x.:....x:...---......--......x..::x.....--.x.xx..:::xx..:......x::.x.:x.:x...x.-...:x.:.:....:....:x.xxx-..:...:..:.......x.............::..::.:..:.. 20M3I6M2I17M2D37M1I24M1I44M 99/148 66.9% 155/94230402 0.0% 9/148 6.1% -32857879 -61372523 +3137 chr4 + 190214555 31868706 31868705 31868761 56 TTCCTTCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTCTTTTTTTCTTTTTCTTTTT chr4 + 94230402 86518997 86518996 86519052 86518997 86518996 86519052 56 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTT ..:.....:...:..::.:x..:.xx..:.......:...............x:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -54650291 -39580111 +3137 chr4 + 190214555 31868711 31868710 31868772 62 TCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTCTTT-TTTTCTTTTTCTTTTTGATGGAGTCTT chr4 + 94230402 56907959 56907958 56908021 56907959 56907958 56908021 63 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTT ...x:....:.:....:.x.:....:...:.....-....:............:::::.x... 35M1I27M 46/62 74.2% 63/94230402 0.0% 1/62 1.6% -25039248 -69191154 +3322 chr4 + 190214555 31876380 31876379 31876473 94 TTTATCTCATAATCTAATTTTAATGTTTTTTTTTCCTTCTTCTCATTCCTATGAATAATTCTCCTTTTCCTCTCCTATTCTCTCATCTTTTCTC chr4 + 94230402 68890613 68890612 68890706 68890613 68890612 68890706 94 TTTGTTTCCCAGTCTCATTTTCACATTTTTGTTTCCTGGTCTCATTTTCTATGAATTGCTTTTTTTTTTTTTTTCTTTTACTTTATCTTATTTC ...:.:..x:.:...x.....x.::.....x......xx.:::xx..:........x::.:.::....::.:.:..x..x::.:.....x.:.. 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -37014233 -57216169 +3461 chr4 + 190214555 31880993 31880992 31881088 96 TTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCCTCCTCCTTCCCTCCCTCCTTCCTTTCTTCCCTTCCTTCCTTCCTCCCTTCCTTCCTTCT chr4 + 94230402 63998163 63998162 63998258 63998163 63998162 63998258 96 TTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTCT ......:.:..:.:x:x..::.........x..x:...:......xx:...:.:.:x:.....x:..:..:x::.:..xx:.:.x.:..x...... 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% -32117170 -62113232 +5322 chr4 + 190214555 31881024 31881023 31881151 128 CTTCCCTCCTCCTTCCCTCCCTCCTTCCTTTCTTCCCTTCCTTCCTTCCTCCCTT--CCTTCCTTC--TTTACATTTTTTGTTTCTTTCTGTCTTTCATTTCTTCATCTTTTTTTTCTTTCCACTTCTATTC chr4 + 94230402 82044089 82044088 82044220 82044089 82044088 82044220 132 CTTTCTTCCCCTTTCCCTTCCTCCTGCATTTCTTCTCTTCTGTTTTGCCTCCCTTTACcttcctccctttttctttctccttctctttctatttctcctcttccttTCTTTATTTTCTTACCTCTTTGTTTC ...:.:...:.:......:......x.x.......:....:x.::.x........--.......:.--...x.x..:.::x.:.......:.:.:..x.:.::::x.....x.......x..x...:xx... 55M2I9M2I64M 91/128 71.1% 132/94230402 0.0% 4/128 3.1% -50163065 -44067337 +3019 chr4 + 190214555 31918716 31918715 31918767 52 CAAAAAAAAAAAATACATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472497 51472496 51472548 51472497 51472496 51472548 52 CAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ....::......:..x.....:.......x.:.:.......:x..:.:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -19553781 -74676621 +3241 chr4 + 190214555 31918736 31918735 31918821 86 ATATATATATATATATATATATATATATATATATACACACACACACACACACATATATA-----CACACACACACAGACATGTATAAAATA chr4 + 94230402 23247722 23247721 23247812 23247722 23247721 23247812 91 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........x:x.x.-----:...::x.:.x.x.:..:...:..... 59M5I27M 58/86 67.4% 91/94230402 0.0% 5/86 5.8% 8671014 NA +3338 chr4 + 190214555 31918742 31918741 31918802 61 ATATATATATATATATATATATATATATACACACACACACACACACATATATACACACACA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x......x.:.......:......::...::.....x....x...:....x::..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -29352033 -64878369 +3459 chr4 + 190214555 31918758 31918757 31918841 84 ATATATATATATACACACACACACACACACATATATACACACACACACAGACATGTATAAAATATACACACACACATACACATA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.......:x:.::x...:..:..:.....:.......x...x.x.x....xx....::x.:.x...:.:... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 8671036 NA +3206 chr4 + 190214555 31918760 31918759 31918843 84 ATATATATATACACACACACACACACACATATATACACACACACACAGACATGTATAAAATATACACACACACATACACATACA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...:........:x:.::x......:........:.....x...::x:x....x.xx:...::x.:.x.:.:...:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 8671038 NA +3053 chr4 + 190214555 31925097 31925096 31925150 54 AAGATTCAAAGAATCAAGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 73036126 73036125 73036179 73036126 73036125 73036179 54 AAGTTTTAGATAATCCAGATTTGATTTTTGTTTCTCTTTTTTTTTTTTTCTTCT ...x..:.:.x....x..:....x.....x...:.:.............:..:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -41111029 -53119373 +3247 chr4 + 190214555 31925098 31925097 31925171 74 AGATTCAAAGAATCAAGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTTCTCTG chr4 + 94230402 84397512 84397511 84397585 84397512 84397511 84397585 74 AGAATCAAGCTATCAGATCTTGTTGTTTCGTTGTTTTTGTTTTTTGTTTTTTTTTTAAACACAGTCATCCTATG ...x....:xx....::x:.....x...:x..x.....x......x.........x.:...x....x.:..x.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -52472414 -41757988 +3140 chr4 + 190214555 31925111 31925110 31925166 56 CAAGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTT chr4 + 94230402 51498299 51498298 51498354 51498299 51498298 51498354 56 CAATGCTTGTCTTTTTTTTTTTTTTTTAATTCCACTTGCTTTGAAGCAGAGTCTTT ...x.:....:................xx..::x:..x:.....::.......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -19573188 -74657214 +3332 chr4 + 190214555 31959052 31959051 31959142 91 AAAAAGAAAAAACATATATATATATATATATATATATATATATATATATATATAAAATATAGGCTGATATTCTTCTTTAGTAGGTTATAAA chr4 + 94230402 85548421 85548420 85548505 85548421 85548420 85548505 85 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATG----GATATCCAT-TTTAGT-TGTTGTAAA .....:......x.xx.....:...:.:.:.::...:..........x.....x.:.:..:----.....:.x.-......-x...:.... 61M4D9M1D6M1D9M 65/85 76.5% 85/94230402 0.0% 6/85 7.1% -53589369 -40641033 +3388 chr4 + 190214555 31960100 31960099 31960245 146 TTTCTTTCCTTCTTTCTTCTTTCTCTTCTTTCTTT---CTCATCTTTCTTTCCTTCTCTTTCTTTACTTCCTTCCTTCTTTCTCTTCTTTCCTTCTTTCCTTCTTTTTTCCCTTCCTTCCCTCCTTCCTTCCCC-ACTTCCTTCCTTCCC chr4 + 94230402 27978811 27978810 27978960 27978811 27978810 27978960 150 TTTGTTGGTTTTTTTTTTCTCTTGCTACTTTTGTTGCACTGATATGTTTTTAGTTATTTTTCTGTGCCTTAGCTCTCTTGACTTTCCTTTCCTTCCGTCTATGTGTTTTTTCTCTATATATGCCTTTTTTCCCCTACTTTCTCCTGTTCC ...x..xx:..:...:....:.:x..x....:x..---..x..x.x.:...xx..x.:.....x.:.:.:xx::..::.xx..:.:.........:x..:x.x.x....::..::x.x:x:x....::......-....:..:.:x.:.. 35M3I96M1I15M 89/146 61.0% 150/94230402 0.0% 4/146 2.7% 3981289 NA +3250 chr4 + 190214555 31983109 31983108 31983187 79 GTACAGAAGTTTATACACACATACACACACACACACACACACAAAATATACAAATATGTAAATATATATTATATATAGA chr4 + 94230402 23247732 23247731 23247809 23247732 23247731 23247809 78 GCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATA-TATATATGAA .:...x.x:.....:x...:..::.......:............::x.x.x.:x..::.:....x...-.......::. 68M1D10M 55/78 70.5% 78/94230402 0.0% 1/78 1.3% 8735377 NA +3164 chr4 + 190214555 32022719 32022718 32022795 77 AAGAAAGCTGTGAACAGCGAAAATTTTGCTGTAAGTTTCCCTGTGTCCTCTCTCCCTCTCTCCCTTCCCCCTCCCCC chr4 + 94230402 26884295 26884294 26884371 26884295 26884294 26884371 77 AGAAAAGCAGTAAATAGAATAAGTTTCACAGTCTGTGTTTTTGCTTTTGCTCTCTCTCTCTCCTTCCCCCCCCCCCC .::.....x..:..:..x:x..:...::.x..xx..x.:::..:x.::x.....:........:.:.....:..... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 5138424 NA +3063 chr4 + 190214555 32026724 32026723 32026843 120 ACAAAACAAACAAAAACAACAAAAAACCTTTCTTCCAGACCCCATGAAATTTTTGTTATTAAAT--ACTGTACATAATTAAGTCATTAGACTACAGAAA-------AGATTATTACTTTTATGAAAAAA chr4 + 94230402 62907895 62907894 62908019 62907895 62907894 62908019 125 ACAAAGCAAACAAAAACAACAAGGAACATTGTCATTTCACCCCATTTAATTCTTGTTGACAAATGAACAGCACA----GAAGACGTGGCACCATAGTAGCATATGTACAATATGACAGTTGTGAAAAAA .....:................::...x..x::x::xx.......xx....:.....:x:....--..x.:...----x...x.:.x:x..:.:..x.:-------.x.x...x..xx..:........ 64M2I8M4D21M7I23M 80/116 69.0% 125/94230402 0.0% 13/116 11.2% -30881171 -63349231 +3268 chr4 + 190214555 32042074 32042073 32042178 105 TTGTTGTTAACTATAGTCATCCTTTCCACTATAAAACATTAGAACTGATTCCTTTTATATAACTGTGTGTTTGTACCCATTAACTAACACTTCTTCATCCCTCTT chr4 + 94230402 37418504 37418503 37418600 37418504 37418503 37418600 97 TTTTTGCTAA---TAAGCATGTTTTTTAATATTAAACATTAAAACTAAGTAATTTTAAATAACTGTCTGTTTTCATACATTAA-----ACTACTGCGTTCTTTCT ..x...:...---..:x...x:...::.x...x........:....:.x.xx.....x........x.....x:.:x......-----...x..x.:.:.:.::. 10M3D70M5D17M 69/97 71.1% 97/94230402 0.0% 8/97 8.2% -5376430 -88853972 +3144 chr4 + 190214555 32059748 32059747 32059805 58 ATACACATATATACACACACACACATATATATACACATACATATACACATATATATAT chr4 + 94230402 74526066 74526065 74526123 74526066 74526065 74526123 58 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT .:..xx.x..x:..............:x.:.......x.:......::......:... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -42466318 -51764084 +3048 chr4 + 190214555 32094725 32094724 32094793 69 TTATAACATATGTAAAGTCTATATATATATATGTGTGTGTGTACATAGATATACATATAGATATAGATA chr4 + 94230402 65939483 65939482 65939551 65939483 65939482 65939551 69 TTTTCATGTATATGAAATGTATACGTCTATATGTGTATGTGTGCATCAACATACATGGAATCATAGACA ..x.x.::...:.:..:.x....::.x.........:.....:...x:.:......:x.:x:.....:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -33844758 -60385644 +3457 chr4 + 190214555 32101975 32101974 32102026 52 GTTGCTATTGTCTCTTTTTTTGTTTGTTTTTTGTTTTGTTTTGTTTTCGATT chr4 + 94230402 73657895 73657894 73657946 73657895 73657894 73657946 52 GTTGCTATTGTTTATTTGTTTACTTGTTTTTTGTTTTGCTTTGTTTCTGTTT ...........:.x...x...::...............:.......::.x.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -41555920 -52674482 +3316 chr4 + 190214555 32101982 32101981 32102146 165 TTGTCTCTTTTTTTGTTTGTTTTTTGTTTTGTTTTGTTTTCGATTACTACAAAATCTTGATCAAATCTTTATT---GAGCTATTCAGATAAAAAATAGAGTTCCTTATTAGACCTTTGAAAATATGTGAAATTGAATATTTGTAAAAATGATATTATCTTCTCATGGG chr4 + 94230402 13244826 13244825 13244964 13244826 13244825 13244964 139 TTGTGGGTTTTTTTGTGTGTTTTTTGTTTTGTTTTGTTTGAAATCAATCCAGTTTTAATATCAAATCTTCATGAAAAAGCTATC------ACAGAAACAGCTTCACAGCAGATC---------------------ATATTTG--AAGATGCTGTTTTTATTTCATGGG ....xxx.........x......................xx:..:.x.x..:xx.:xxx..........:..x---:......:------.x.:.x.x..:.:.x:.x:...:.---------------------.......--..:...x.:..x.:x.:....... 73M3I8M6D24M21D7M2D24M 97/136 71.3% 139/94230402 0.0% 32/136 23.5% 18857156 NA +3378 chr4 + 190214555 32108805 32108804 32108887 83 CATGGTGGCGGGCGGCCGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x:..--:...:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -43924392 -50306010 +3037 chr4 + 190214555 32120546 32120545 32120592 47 ACAATTTTTATTTAAATGGAATATTCCCAGCACCTCTTAAAATATTA chr4 + 94230402 72486517 72486516 72486563 72486517 72486516 72486563 47 ATAATGTTTGTCTAGATAAAACATTCTCAGCACCTCTTAAGATATTA .:...x...:.:..:..::..:....:.............:...... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -40365971 -53864431 +3367 chr4 + 190214555 32153459 32153458 32153626 168 CAGCCTTCCAAATCACGTATCAGGATTGCTAAATGGT--TTTGAATTTATGTGTATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTATGTATGTATGTATGTGTATAT chr4 + 94230402 85834484 85834483 85834647 85834484 85834483 85834647 164 CAGCTTTATTAAT-ACCTACCTTATTTGCCAGAATGTAGTTTGGGTTTTT-----TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT ....:..x:x...-..x..:.xx:x....:.:.xx..--....::...x.-----...x:..x.....x...............:.:.xx.::..x::..:::.:....x...:....x.:..:::::...:.:.::.:xx:xx.x.x..x.x:x.x.......::.x.. 13M1D23M2I11M5D115M 99/162 61.1% 164/94230402 0.0% 8/162 4.9% -53681025 -40549377 +4322 chr4 + 190214555 32153505 32153504 32153609 105 ATGTGTATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTG--------TGTGTATATATATGTATGTATGTGTATGTA chr4 + 94230402 21109187 21109186 21109299 21109187 21109186 21109299 113 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA ..x..:x....:..:.....x.x....x.:..:.x...:.....x:.:....::x:.....:x....:..:...:--------.x...:.....:......x..:..:...:. 75M8I30M 74/105 70.5% 113/94230402 0.0% 8/105 7.6% 11044318 NA +3069 chr4 + 190214555 32153506 32153505 32153577 72 TGTGTATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTG chr4 + 94230402 5214245 5214244 5214316 5214245 5214244 5214316 72 TGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...x.::.:.:.:..x.::....:..::.x..::.:.....:.::.x.::........:..::.x....... 72M 46/72 63.9% 72/94230402 0.0% 0/72 0.0% 26939261 NA +3268 chr4 + 190214555 32153514 32153513 32153597 84 TATATATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.....x.............:...:.xx..:..x:::.:::.:.:..x...::...x.:..:::.:...:.:::... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -53681019 -40549383 +3640 chr4 + 190214555 32153514 32153513 32153621 108 TATATATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTATG--TATGTATGTATGTG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.:..:.x.:.:.::.:x:.:..:.::x:..:..:x...::..:...::x:..::x.x...:.:..........--....:...:.:::. 94M2I14M 67/108 62.0% 110/94230402 0.0% 2/108 1.9% 11044320 NA +3457 chr4 + 190214555 32153518 32153517 32153642 125 TATGTGTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTGTGTGTAT-ATATATGTATGTATGTGTATGTATGTATGTATGTGTATATATATATATATATATAA chr4 + 94230402 79265520 79265519 79265644 79265520 79265519 79265644 125 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTT-TGCCTTTTTGAGTGTACAAATGCATTTCTGTAA .:..........::........xx...:..:.:...:.:.....:::.:::.x.::.:.x.....x:.:-.:.:x.x...:..x:..:.:x.-..:x.x.x..x..:..:.x..::..x.x.:... 69M1I22M1D33M 77/124 62.1% 125/94230402 0.0% 2/124 1.6% -47112002 -47118400 +3118 chr4 + 190214555 32153534 32153533 32153575 42 TGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTG chr4 + 94230402 48958675 48958674 48958716 48958675 48958674 48958716 42 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATG .......x...:.................:......x..:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -16805141 -77425261 +3405 chr4 + 190214555 32153557 32153556 32153642 86 GTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTATGTATGTATGTATGTGTATATATATATATATATATAA chr4 + 94230402 79265519 79265518 79265603 79265519 79265518 79265603 85 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAA ........:.:.::.........xx........:..::.:..:..:::.:.:.x::..:.x.....x:.:.-.:.:x.x....... 71M1D14M 57/85 67.1% 85/94230402 0.0% 1/85 1.2% -47111962 -47118440 +3280 chr4 + 190214555 32153584 32153583 32153644 61 TATATATATGTATGTATGTGTATGTATGTATGTATGTGTATATATATATATATATATAACT chr4 + 94230402 6200763 6200762 6200823 6200763 6200762 6200823 61 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCT ...x.x.:..:..:.........x.........x.......x.x:.:.:...x.....:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 25952821 NA +3080 chr4 + 190214555 32155263 32155262 32155338 76 TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTCTTTTTAGAGAC-AAGGTCTTGCTCTGTCACCCT chr4 + 94230402 22915685 22915684 22915761 22915685 22915684 22915761 77 TTTTATTTATTTATCTACTTATTTCTGTATTAATAGCTTTGTCTTTTTAAGAGAAGAAGACTTTCCTCCACCATCTT ..............:..:......x.x....x..xxx...:.::....x.....x-...:::..x...:::..:.:. 55M1I21M 54/76 71.1% 77/94230402 0.0% 1/76 1.3% 9239578 NA +3012 chr4 + 190214555 32156916 32156915 32156959 44 CTTTGTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTGTGTG chr4 + 94230402 79940284 79940283 79940327 79940284 79940283 79940327 44 CTTTGGTTTTTTTTGTTGTTGTTGTTATTTGTTTGTTTTTTATG .....x.....x...........x..:............x.:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -47783368 -46447034 +3629 chr4 + 190214555 32156924 32156923 32156991 68 TTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 23734019 23734018 23734084 23734019 23734018 23734084 66 TTGGCTTTTGTTGTTGTTGTTTATTTGTTTTTTTTGTTTGTGTGTGTGTGT-TTTGTGT-TGTGTGTG ..x.:.x........x......:........x.x...x.............-.x.....-........ 51M1D7M1D8M 57/66 86.4% 66/94230402 0.0% 2/66 3.0% 8422905 NA +3241 chr4 + 190214555 32178233 32178232 32178291 59 TGCCCAAATTGAAAATCTCCATTTTATCCCTTCCTTTTCTTATGTTACTCCCCACTCTT chr4 + 94230402 7013182 7013181 7013240 7013182 7013181 7013240 59 TGCTCAGGTTAAAAACATTAACTTTTTCCCTGTCTTTTCTGATGTTATTCTCCACTCTT ...:..::..:....:x.:x.:...x.....x:.......x......:..:........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 25165051 NA +3100 chr4 + 190214555 32190471 32190470 32190531 61 AACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAG chr4 + 94230402 18047932 18047931 18047992 18047932 18047931 18047992 61 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAG ......:.:.xx..:.x...:............x........xx:..:.x..x..:..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 14142539 NA +3288 chr4 + 190214555 32195905 32195904 32196022 118 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTTGCGTTTCCTATTTAAAAGACACATCTAAGAAAATTTAAAAGACAAGCAATAAACTCAGAGAAAATATTTGAAAATTATGTCT chr4 + 94230402 83185879 83185878 83185996 83185879 83185878 83185996 118 CAAAGAGATGGGAAAAAAAAAAAAAAAAAAAGGAAAGCCTCTTTATTCTAATTAACTCAGTAAAAAAAACCCAAAAAACAACAAAAAAGAACAGCAACAATTTTGGGAAACAATGCCT ....:.:.x:::...................xx:xx..x.:.::xx.:...xx:..x..x:x..:....:::....:....xx..x..:xx...x:.x...x..x.:...:x...:.. 118M 73/118 61.9% 118/94230402 0.0% 0/118 0.0% -50989974 -43240428 +3445 chr4 + 190214555 32222954 32222953 32223133 180 TATTGCCCCCATGTAAAAGCTGCATTTC----CAATATGAGAT--AAAAAGGTATTTTATTAAAAGTGCAAGGTTTTTA----TGCCTGGG--GTATATAGCTGCAGTGATGGCTTCAGAAATTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTACAATACTCCTTATGCTGGA-------TTCATTTATCTTGAAAT chr4 + 94230402 56813221 56813220 56813414 56813221 56813220 56813414 194 TATTGACCTGATG-AAATGCTGCCTTTCACAGCAAAATAAAATTAAGAAAGAGAATTGAGACCAAGTG----GCTTCAACAATTACCTAAGCAATATTTACTTGCTGGTAGGGGCTCGGTATTTTTTTTTATTTTTCTCTCTCTCTATTTTTTTTTCAATATCCTTTATGCTTTATGTTAATTTGGTTTATCTTTACAT .....x..:x...-...x.....x....----...x..:.:..--.:....:x.x..x.xxxx.....----.:..:x.----.:...::.--:...x..x:...x.xx.x..x:..:.x.x....:...x:......:.:.:.:.x........x.....::.:.......xx.-------..x:........x.x.. 13M1D14M4I11M2I23M4D7M4I8M2I82M7I17M 121/175 69.1% 194/94230402 0.0% 24/175 13.7% -24590267 -69640135 +3019 chr4 + 190214555 32259191 32259190 32259281 91 TTTTTTCTCTTTCTTTCTTTTTCTTTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTTCTTTCGTTCTCTCTCTCTCTTTCTT chr4 + 94230402 83326938 83326937 83327028 83326938 83326937 83327028 91 TTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...x...x.:x.....x.:.....xx.:....::..::...::..x:.:xx:..:x.:...x.x..:..::..::.:...:....:..::. 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% -51067747 -43162655 +3214 chr4 + 190214555 32259191 32259190 32259254 64 TTTTTTCTCTTTCTTTCTTTTTCTTTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCT chr4 + 94230402 34366986 34366985 34367049 34366986 34366985 34367049 64 TTTTTGTGTTTTCATTTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCTT .....x:x:....x..:..x..........:........:...::..::..::::..::...:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -2107795 -92122607 +3108 chr4 + 190214555 32259217 32259216 32259273 57 CTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTTCTTTCGTTCTCTCTCTC chr4 + 94230402 25163661 25163660 25163717 25163661 25163660 25163717 57 CCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCC .:...x.:.:.::.:.:....x...x......:...:.....:..x...:.....:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 7095556 NA +3155 chr4 + 190214555 32259256 32259255 32259319 64 TCTTTCGTTCTCTCTCTCTCTTTCTTTCTTTCTTTTTTTTTGACAGGATCTCCCTATTGTGCCC chr4 + 94230402 6554016 6554015 6554079 6554016 6554015 6554079 64 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACTGAAGTTCCC .:.x.::..............:...:.:...:..........::....x:x.x..:xx..x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 25705240 NA +3025 chr4 + 190214555 32274833 32274832 32274904 72 GTGCCTGAAATCCCAGCTACCTGGAAGGCTGAGGCAGGAGAATCGCTTGAATCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x..x.:.:........:..:.........x.xx.x...x.:......:..x.:..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -43758373 -50472029 +3016 chr4 + 190214555 32296182 32296181 32296236 55 TAATATATATATATTATATATATTATATATATACATAATATATATACATAATATA chr4 + 94230402 25322067 25322066 25322121 25322067 25322066 25322121 55 TAGTATATATATGTTATATATGTTATATAACTATAACATAGTTATATATAATACA ..:.........:........:.......xx..:.xx...xx....:......:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 6974115 NA +3139 chr4 + 190214555 32345226 32345225 32345330 105 AATGAATATTCATATGGAGATAAGGGAAGATATTGAAACATGAACAAGAACTTAATAGTACTAACACACACACACACATATGTGTATATATATGTATATATGTAT chr4 + 94230402 45400536 45400535 45400638 45400536 45400535 45400638 103 AATAAAAACGTCTATCTAGTTATGGTGAGA-AGTGACAGAGGAA-AAGAATGGAAATGTAACTGCACATGCACACACAGATGTATACATTTATGTATATATGTAT ...:..x.:x:x...xx..x..x..x:...-.x...x.x.x...-.....:xx..xx...x:x:....::........x....:..:..x............... 30M1D13M1D60M 72/103 69.9% 103/94230402 0.0% 2/103 1.9% -13055310 -81175092 +3094 chr4 + 190214555 32345270 32345269 32345365 96 CAAGAACTTAATAGTACTAACACACACACACACATATGTGTATATATATGTATATATGTATATAAGTATATACGTATATACTTATATATACATATA chr4 + 94230402 61270751 61270750 61270833 61270751 61270750 61270833 83 CAAGAGCTTAA-GGCGATAACAACCA------------TGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACA .....:.....-:.::x.....xx..------------..x......x................x.:.::...::.x.:...:..:....x:..:. 11M1D14M12D58M 61/83 73.5% 83/94230402 0.0% 13/83 15.7% -28925481 -65304921 +3281 chr4 + 190214555 32345408 32345407 32345543 136 TGTATATATATGTGTATATATAGTATATATGTATATGTGTGTATGTATATACGTATATGCATATATGTATATACGTATATGCACATATGTATATGTATATATGTGT----ATATGTGTATATATGTATATATGTGTATAT chr4 + 94230402 5214182 5214181 5214321 5214182 5214181 5214321 140 TGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...:x....:x.:::.xxx::...::.x:...::x::..x.:.:.:..x:::..:.::...x:.:.x.::.:..::..x.:.:::....:..x..:..:.:....:----.::.....:.::...:.x..:....:.:.. 106M4I30M 74/136 54.4% 140/94230402 0.0% 4/136 2.9% 27131226 NA +3500 chr4 + 190214555 32345503 32345502 32345613 111 TATATATGTGTATATGTG-TATATATGTATATATGTGTATATATGTGTATATATGTATATATGTATATATGTGTATATATGTATATATGTGTGTGTATATATATGTATATAT chr4 + 94230402 89812949 89812948 89813060 89812949 89812948 89813060 112 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....:.xx..:.x....-:.....x:..x............x.:x:.::x.xx:..:..:..:.x.:x:x::.:::.....x:x.:.........:.........x..x.. 18M1I93M 72/111 64.9% 112/94230402 0.0% 1/111 0.9% -57467446 -36762956 +3200 chr4 + 190214555 32355663 32355662 32355726 64 AAAAATATTTTATTGTTGTTGTTGTTGTTTGTTTTGTTCTGTTTTGTCTTCCCTTTTTCAAGCT chr4 + 94230402 38625015 38625014 38625078 38625015 38625014 38625078 64 AGAGCTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCTCTTCTCTCTTCAGTCT .:.:x.:....x.........x....x...........:......x:::.:.::.:....:x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -6269352 -87961050 +3171 chr4 + 190214555 32372976 32372975 32373057 82 ATCAAACATTTAAAAAAGATAAAATATATATATATATATATATATATTTCTTATTT---TGTAACAAATATGACATAGGGTAAAT chr4 + 94230402 90030078 90030077 90030162 90030078 90030077 90030162 85 ATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTACTGGTAGAAATGTAGCATTGTAAAAAT ..x...x.x..x:...:..x............:.:.:..........x...x....---..xx.x....:.::...x.x:x.... 56M3I26M 60/82 73.2% 85/94230402 0.0% 3/82 3.7% -57657102 -36573300 +3009 chr4 + 190214555 32399170 32399169 32399230 61 TGTGTGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x...:..:...:...:.:........:.....:.x:x::...::........:.:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -23295278 -70935124 +3104 chr4 + 190214555 32399186 32399185 32399268 83 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.................:.xx:....x.::.:::.:.:..x...:.::.x..:xx::.:...:.:.:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -53435347 -40795055 +3246 chr4 + 190214555 32399188 32399187 32399270 83 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.................:.xx:.:.:x.::.:::...:..x......:.x:xx.:.:.:...:.:.:.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -53435345 -40795057 +3330 chr4 + 190214555 32399190 32399189 32399271 82 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x::.x.....x.................:.xx....:x.::.::....:..x.:.:..::.x:.::.:.:...:.:.:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -53435343 -40795059 +3507 chr4 + 190214555 32399192 32399191 32399275 84 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATATACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT--GTTTATGCACACATACACACA ...x::.x.....x.................:.xx:...:x.::..:....:..x...:.:--..x...::.:.:...:..... 61M2D21M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -53435341 -40795061 +3953 chr4 + 190214555 32399202 32399201 32399306 105 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATATACACACATATACTGGTATATATATATATACATATAC chr4 + 94230402 85834541 85834540 85834643 85834541 85834540 85834643 103 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATAC--ATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTAC .....x...................xx:...:x.:...:....::.x....--:.:.x...::.:.:..........:xx....x:x..x.x:x.x.::..:... 51M2D52M 71/103 68.9% 103/94230402 0.0% 2/103 1.9% -53435339 -40795063 +3224 chr4 + 190214555 32399204 32399203 32399282 79 TGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATATACACACATATAC chr4 + 94230402 85834541 85834540 85834611 85834541 85834540 85834611 71 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATAT--------GTAAATACATGTTTATGCACACATACAC .....x...............:.:.xx:...:x::...:...:--------...x...:..:.x...:........:.. 43M8D28M 53/71 74.6% 71/94230402 0.0% 8/71 11.3% -53435337 -40795065 +3238 chr4 + 190214555 32399207 32399206 32399355 149 GTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACATATACTGGTATATATATATATATACACACATATACTGGTATATATATATA---TACATATACTGGTATATATATATACATATACTGGTA---------TATATATATACATATACTGGTA chr4 + 94230402 79265519 79265518 79265678 79265519 79265518 79265678 160 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA .............::...:....xx...:....:...:..:.:.:.xx::::.x.:....x.:.::x....-.:..:xx......x..::.---.:.x.x.x:x:..:..:.x..::.:x.x.::x:..:---------.:...x.......x..:x:... 71M1D19M3I36M9I22M 91/148 61.5% 160/94230402 0.0% 13/148 8.8% -46866312 -47364090 +3133 chr4 + 190214555 32399232 32399231 32399344 113 TGTGTATATATATACATATACTGGTATATATATATATATACACACATATACTGGTATATATATATATACATATACTGGTATATATATATACATATACTGGTATATATATATAC chr4 + 94230402 21109190 21109189 21109302 21109190 21109189 21109302 113 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:x....:..:.:::.x.x:xx.x:::...x.....:...x..........x..:..:x....::..::..:x.xx.:x.x.:.:....::.:..:x::...::..::.:.. 113M 65/113 57.5% 113/94230402 0.0% 0/113 0.0% 11290042 NA +3402 chr4 + 190214555 32399445 32399444 32399566 122 ATATACATATACTGGTGTATATATATATATACATATACTGGTATATATACATACATATACTGGTATATATATATACATATACTGGTATATCTATATATATATACACACACACACACACACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATAC--ATGTGTGTCTCTGTGGGCGTAT----TTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x.:.x.....--:...:.:.x.x.:.:x:.:...----x.....:...x:.........x..:..:x....:::..:....x:.::x...:.:.....:.::.::x.:.::..::..... 12M2D22M4D82M 73/116 62.9% 116/94230402 0.0% 6/116 5.2% 11290258 NA +3064 chr4 + 190214555 32399521 32399520 32399573 53 ATATACTGGTATATCTATATATATATACACACACACACACACACACACACACA chr4 + 94230402 53944240 53944239 53944292 53944240 53944239 53944292 53 ATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACA .......x:.:.x....x..x.....:..................:xx:.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -21544719 -72685683 +3316 chr4 + 190214555 32399557 32399556 32399631 75 ACACACACACACACACACACATATATATATACACACATATACCGGTATATGTGTGTGTATATATATATACACACA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATAT----GTATATTTGTGTGTGTATATGCATGCACGTA .......:.:x....::..x.:.:..::.....x.x....----......x.......:.....::..:...::. 40M4D31M 52/71 73.2% 71/94230402 0.0% 4/71 5.6% 9799359 NA +3246 chr4 + 190214555 32399776 32399775 32399845 70 ACACATATATACACATATATACACATATATATACACATATATACACATATATATATACTGGTTTTGTTTC chr4 + 94230402 74526066 74526065 74526135 74526066 74526065 74526135 70 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTC ....xx.x..x....:.:.:......:x.:.......x.....:..:.......:..:.x:xx...:... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -42126290 -52104112 +3058 chr4 + 190214555 32418850 32418849 32418891 42 TCTTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTA chr4 + 94230402 37318513 37318512 37318554 37318513 37318512 37318554 42 TTTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTCTA .:..:....:.:.......:..........::.......... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -4899663 -89330739 +3040 chr4 + 190214555 32418886 32418885 32418935 50 CTTCTATCTTTCTCTCTCGCTTTCTTTTTTTTTTTTTCTCTGATTGTGCT chr4 + 94230402 45847282 45847281 45847331 45847282 45847281 45847331 50 CTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTT ...:.....:........x:...:............:.:x..:x....:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -13428396 -80802006 +3021 chr4 + 190214555 32495020 32495019 32495068 49 CCTTTCTTTCTTTCTTGCTCTCTCTCTCTTTTTTTTTTTTCTTTTTTTG chr4 + 94230402 56907963 56907962 56908011 56907963 56907962 56908011 49 CCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTG ..:..:::..:.:.x.x:......................:.:...... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -24412943 -69817459 +3106 chr4 + 190214555 32495023 32495022 32495076 54 TTCTTTCTTTCTTGCTCTCTCTCTCTTTTTTTTTTTTCTTTTTTTGTAGTTTTG chr4 + 94230402 23104874 23104873 23104927 23104874 23104873 23104927 54 TTGTTCTTTTTTTCCTCTCTCTCTTTTTTTATTTTTTATTTCTTGGTAGATTTG ..x..::...:..x..........:.....x......x...:..x....x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 9390149 NA +3266 chr4 + 190214555 32495024 32495023 32495081 58 TCTTTCTTTCTTGCTCTCTCTCTCTTTTTTTTTTTTCTTTTTTTGTAGTTTTGCTCTT chr4 + 94230402 40429933 40429932 40429990 40429933 40429932 40429990 58 TCCTTCTCCCTTGCTCTCTCCTTTTTTTTTTTTTTTCATTAAATATCTTTTTGCTCTT ..:....::...........::.:.............x..xxx.:.xx.......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -7934909 -86295493 +5416 chr4 + 190214555 32523259 32523258 32523396 138 AGACTTTGCCTGCAGTGATAGACATATGGTCAGGATGTTCTAATTCAGTTGTTAACATACTATGTT---GCACATAA------CAGTTTATCATAGAAGCTGTTACAGACTCTGGGAAAAGCCAACCACAATAATTAGAAATTATCA chr4 + 94230402 73426679 73426678 73426825 73426679 73426678 73426825 147 AGACTGTCCCTGCAGTACTGGGCATTTGGTCATGATGTTCTAACATAGTTATAAACATATTATATCTTAGAACATAAGCACACTGATTTATAATAAAACCTGTTATAATCACTGAAAAAGAACAGGCAGAATTATTAAAAATCACTA .....x.x........:x.:.:...x......x..........:x:....:.x......:...:.:---.x......------:::.....x...:..x......:.:x.x...::...::x..:x..x...x....:....:.::. 66M3I8M6I64M 98/138 71.0% 147/94230402 0.0% 9/138 6.5% -40903420 -53326982 +5222 chr4 + 190214555 32523259 32523258 32523396 138 AGACTTTGCCTGCAGTGATAGACATATGGTCAGGATGTTCTAATTCAGTTGTTAACATACTATGTT---GCACATAA------CAGTTTATCATAGAAGCTGTTACAGACTCTGGGAAAAGCCAACCACAATAATTAGAAATTATCA chr4 + 94230402 73424766 73424765 73424912 73424766 73424765 73424912 147 AGACTGTCCCTGCAGTACTGGGCATTTGGTCATGATGTTCTAACATAGTTATAAACATATTATATCTTAGAACATAAGCACACTGATTTATAAGAAAACCTGTTATAATCACTGAAAAAGAACAGGCAAAATTATTAAAAATCACTA .....x.x........:x.:.:...x......x..........:x:....:.x......:...:.:---.x......------:::.....x.x.:..x......:.:x.x...::...::x..:x..x...x....:....:.::. 66M3I8M6I64M 97/138 70.3% 147/94230402 0.0% 9/138 6.5% -40901507 -53328895 +3045 chr4 + 190214555 32545778 32545777 32545843 66 AATATTAATTTGAATTGTGGATGACAAGAGTGAAAGACACTGGATCTAATTAATTAATTTAAATGT chr4 + 94230402 73525699 73525698 73525764 73525699 73525698 73525764 66 AAAAATAATTTCTATTGTTTATAACAACAGTAAAAAAAACTTTATCTAATTTACTAATTTAAAAGT ..x.x......xx.....xx..:....x...:...:.x...xx........x.:.........x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -40979921 -53250481 +3509 chr4 + 190214555 32618719 32618718 32618802 84 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTACAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::......x::.--....:.:.........xx.:........x.xx.x...x.:...........:..x.xx:..:..:... 14M2D68M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -43414478 -50815924 +3111 chr4 + 190214555 32671059 32671058 32671134 76 GGGCAACAAGAATGAAACTCCGTCTCAAAAAAAAAAAACAAAAAACAAAAAACAAAAAACAAACAAAAACATAATA chr4 + 94230402 62992980 62992979 62993055 62992980 62992979 62993055 76 GGGCAGAGTGGATGAAATGGTGACTGAAAACAACAGTATTAAAAAAAAAAAACACAAAACAAACAACAAAACAATA .....:x:x.:......:xx:.x..x....x..x.:x.:x.....x........x...........x..x.:.... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -30321921 -63908481 +3191 chr4 + 190214555 32685300 32685299 32685460 161 AGGACTAGGGCTGAGACATGTAAATGTATAATAATCAATCATTCATCATGAATACCAGAGAGGCTGAGAATTATCTTTCTAGAGCAATGAATAAAGCTGATATTTGG------AGAGAAACACAGACAAAAAAAACAAAAACAAAAAACAAAAAAACAAAAAAAAAA chr4 + 94230402 12551598 12551597 12551742 12551598 12551597 12551742 145 AGGGCTGGGACTGGGAT---TCCACATGCAAAACTCAGGTATTTGTCCTCTCTCCCAGAAGGAATGGGG-------------------GAGTGAGACAGTCGTGTGGCTACAAAAGAAAAAGCACACAGATAAAACAAAAACAAAACACAAAGAAACAAGAAAAAGA ...:..:..:...:..:---.xx.::.::..x.x...:x:...::..x.xxx.x.....::.:x..:.:-------------------..:.:.::.x.x::.x...------.:::...x:..x...:.x...............x.....:......:.....:. 17M3D49M19D19M6I54M 89/139 64.0% 145/94230402 0.0% 28/139 20.1% 20133702 NA +3382 chr4 + 190214555 32685407 32685406 32685486 80 AGAGAAACACAGACAAAAAAAACAAAAAC--AAAAAACAAAAAAACAAAAAAAAAAAACTCTACAACAAACCTCTACATGTA chr4 + 94230402 54830724 54830723 54830805 54830724 54830723 54830805 82 AGAAACAAACAAACAAAAAAAAAAAAAACCCACACACTTAAAAAAAGAAAGAAAGAAACTCTAAAACCCACCTCAGCAAGTA ...:.x.x...:..........x......--.x.x.x:x......x:...:...:........x...xx.....x:..x... 29M2I51M 60/80 75.0% 82/94230402 0.0% 2/80 2.5% -22145317 -72085085 +3081 chr4 + 190214555 32703980 32703979 32704017 38 AAAAAAAAAACCCAACAACAACAACAAAAAAGAAAATC chr4 + 94230402 68438556 68438555 68438593 68438556 68438555 68438593 38 AAAAAAAAACCCCAACAACAACGACAAAAAAAAAAATC .........x............:........:...... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -35734576 -58495826 +3381 chr4 + 190214555 32710836 32710835 32710901 66 ATAATTAGACAAAAAAAAAAGAAAAAAAAAAGGAAATAAGCTTTTTTTTTTTTTTTTTTTTTTTAG chr4 + 94230402 62162016 62162015 62162079 62162016 62162015 62162079 64 ATAATTAGA--AAGTAATAAAGAAAAAGAAAGAAAAGAAGCGTATTTTCTTTTTTTTTTTTTCTGG .........--..:x..x..::.....:....:...x....x.x....:.............:.:. 9M2D55M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% -29451180 -64779222 +3666 chr4 + 190214555 32717297 32717296 32717400 104 TCTTATTTTTCCTCTGCTGAAAACATGAGAAGATTTAATGATTTTTCTTTTTTTCCTTCTCCTGAAAACATGAGAGGATTTTTCTCTAATATTCACTGCGATAA chr4 + 94230402 13472800 13472799 13472902 13472800 13472799 13472902 103 TCTTGTGTTTGCCCTGTGAAGGACATTTCCATTTTTAAGGGTTTTT-TTTTTTCCCTTCATTTAAAATTCCTTAAAGATTTTTCTCTAACATTCCCTGCAATAA ....:.x...x.:...:x:.::....xxxx.xx.....x.:.....-......:.....x::.:...x:x:xx:.:.............:....x....:.... 46M1D57M 70/103 68.0% 103/94230402 0.0% 1/103 1.0% 19244497 NA +3065 chr4 + 190214555 32719063 32719062 32719137 75 ATATGTGTGTGTGTATATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGT------ATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:x.:...:...::..x:.......x...------...:...:......:....:..x...:.::..x...:.. 30M6D39M 50/69 72.5% 69/94230402 0.0% 6/69 8.7% -53914860 -40315542 +3098 chr4 + 190214555 32719096 32719095 32719187 92 TATATATATGTGTGTGTGTATATATATGTGTATATATGTGTGTATATATGTATACATATGTGTGTATATATGTATACATATGTGTGTATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGT--------AGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.....x.....:.:.:.:.......xx....--------.x.:..........:x:..:..:.x...:..:.::.::::.:... 39M8D45M 57/84 67.9% 84/94230402 0.0% 8/84 9.5% -53115437 -41114965 +3085 chr4 + 190214555 32719107 32719106 32719153 47 GTGTGTGTATATATATGTGTATATATGTGTGTATATATGTATACATA chr4 + 94230402 63364617 63364616 63364663 63364617 63364616 63364663 47 GTATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTATACATA ..:....:..:.:.......x:.:...........:x.......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -30645510 -63584892 +3288 chr4 + 190214555 32719126 32719125 32719216 91 TATATATGTGTGTATATATGTATACATATGTGTGTATATATGTATACATATGTGTGTATATGTGTGTGTATATATATATAACACACACATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT-------ACACACATG ...x:..x.....x.:.:...:.:::.:...:.xx..:..x.:..........:x:..:....x.:..:.:.:..-------......... 75M7D9M 58/84 69.0% 84/94230402 0.0% 7/84 8.3% -53115407 -41114995 +3198 chr4 + 190214555 32719132 32719131 32719210 79 TGTGTGTATATATGTATACATATGTGTGTATATATGTATACATATGTGTGTATATGTGTGTGTATATATATATAACACA chr4 + 94230402 40388217 40388216 40388291 40388217 40388216 40388291 75 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTG----TAACTGTGTAACTATAAAAAAAACACA .........:.:.x...x:.:....:..:....:..:.....x.....----..xx.....:xx....x.x.x...... 48M4D27M 56/75 74.7% 75/94230402 0.0% 4/75 5.3% -7669085 -86561317 +3143 chr4 + 190214555 32719140 32719139 32719228 89 TATATGTATACATATGTGTGTATATATGTATACATATGTGTGTATATGTGTGTGTATATATATATAACACACACATGTTATATATATAT chr4 + 94230402 76709592 76709591 76709680 76709592 76709591 76709680 89 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGTTGACTGAATGCATTTTAAGAACATAT .....:...:...:...x.:..:.x:::.x:....:.:.......x.....x.:.....x.:.xx.x::x.::...x...x:x.:.... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -43990452 -50239950 +3172 chr4 + 190214555 32742678 32742677 32742723 46 AAGTAATGCTGTTTTTTTGTTTTGTTGTGTTTTTTTTTTTTTTTTT chr4 + 94230402 71626689 71626688 71626734 71626689 71626688 71626734 46 AAACAATGTTGTTCCTTTGTTTTGTTTTGTTTTTCTTTTTCTTTTT ..::....:....::...........x.......:.....:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -38884011 -55346391 +3017 chr4 + 190214555 32742691 32742690 32742740 50 TTTTTGTTTTGTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGG chr4 + 94230402 8115032 8115031 8115081 8115032 8115031 8115081 50 TTTTTGTTGGGTTGTGGGTTGTTTTTTTTTTTTGTTTTTTTTTGAGGTAG ........xx......xx..x............x............:::. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 24627659 NA +3282 chr4 + 190214555 32770230 32770229 32770313 84 AAAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAGGAAAGAT chr4 + 94230402 41112178 41112177 41112260 41112178 41112177 41112260 83 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGA-ATAAAGGAGGATAAAT .::...:.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.....-.x....:....x.:.. 67M1D16M 60/83 72.3% 83/94230402 0.0% 1/83 1.2% -8341948 -85888454 +3020 chr4 + 190214555 32778331 32778330 32778406 76 TTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTCTTTCTTTTTCTTTTTTTTTTTTTTGATGGAGTC chr4 + 94230402 56436012 56436011 56436087 56436012 56436011 56436087 76 TTTTTTCCCCCCCCCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTTTTTCCTGGGTGGAATC ...:....::..::....::..::.::.::..::x.::x.::.:::.:....:..........::.x.:....:.. 76M 45/76 59.2% 76/94230402 0.0% 0/76 0.0% -23657681 -70572721 +3079 chr4 + 190214555 32778332 32778331 32778392 61 TTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTCTTTCTTTTTCTTTTTTTTT chr4 + 94230402 73754472 73754471 73754532 73754472 73754471 73754532 61 TTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTT ...:.::.x:x.....x:x.x:......x....x...:.......:.....:......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -40976140 -53254262 +3189 chr4 + 190214555 32786849 32786848 32786946 98 GTGGTGGCACACACCTGTAGTCCCAGCTACTCTCGAAGCTGAGGCAGCAGAACCACTTGAACCCAGGATCTGGAGGTTGTGAGATCACGCCACTGAAC chr4 + 94230402 76033201 76033200 76033292 76033201 76033200 76033292 92 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT-AGAACATGATGCCAAGC ......-----...x......:.........:xx:.:......x.xxxx...x.............:.x..xx:..:...-...x..:.x::.::.:. 6M5D69M1D17M 65/92 70.7% 92/94230402 0.0% 6/92 6.5% -43246352 -50984050 +3017 chr4 + 190214555 32806761 32806760 32806817 57 GAGTTAATACTTAATACTTAATAAACATGTATATATATATATATATACACACACACA chr4 + 94230402 54005668 54005667 54005724 54005668 54005667 54005724 57 GAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACA ..:.:..:.xx.x...:.x..:.x.:......x........:...:........... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -21198907 -73031495 +3031 chr4 + 190214555 32806779 32806778 32806839 61 TAATAAACATGTATATATATATATATATACACACACACACACACACACACACACACATCTA chr4 + 94230402 61270767 61270766 61270827 61270767 61270766 61270827 61 TAACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ...:..x....x......x.:.......::.:.:..:...::.....x....x..::.x.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -28463988 -65766414 +3167 chr4 + 190214555 32806788 32806787 32806827 40 TGTATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA ....:.......................x.x......... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 28397706 NA +3032 chr4 + 190214555 32821088 32821087 32821126 39 AAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGG chr4 + 94230402 41265483 41265482 41265521 41265483 41265482 41265521 39 AAGTTTACTTTTTTTTCTTTTTTTTTTTTTGAGGCAGGG ......x:........:................:..... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -8444395 -85786007 +3206 chr4 + 190214555 32840091 32840090 32840189 99 ATATATATAATATATATATTATATATATTATATATATATAATATATATATATTATATATAAATATATAATATAAATATATATAATATAAATATATATTA chr4 + 94230402 24369315 24369314 24369413 24369315 24369314 24369413 99 ATAAAAATAGAACAAATGTTGTGTCTTGTTTAAATATGTACTAAATATATATTCTGAATATATATGTACTATATATATGCATTGTCAAAATGTCCATTA ...x.x...:x.:.x..:..:.:.x.xx.x..x....:..x..x.........x.:x...x....:..x....x....::..x:.xx....:.x:.... 99M 66/99 66.7% 99/94230402 0.0% 0/99 0.0% 8470776 NA +3200 chr4 + 190214555 32849462 32849461 32849576 115 TATCCATATCTGTT---TTCTACTTCCTCTTTAAAACCAGTAAGTCTTATATTTGACCTTTTTATTTTCTAGATCTAGGCATGCTTCATTCTTTTTCATTCTTTTTTTTTTGTCTCCT chr4 + 94230402 75106676 75106675 75106782 75106676 75106675 75106782 107 TATTCTTTTCTTTTAGCTTCCAACTCCTCTTTTA-----------CCTGTCCATCAACTCTCTATTCCATAGATCCAAGCATGGTTTTTGGTCTTTTTTTCTTTTTTTTTTTTCTCCT ...:.x.x...x..---...:.x:........x.-----------.:.:.x:x.x.x..:.:....::x......:.:.....x..:x.xx.:...:x.............x...... 14M3I17M11D73M 73/104 70.2% 107/94230402 0.0% 14/104 13.5% -42257214 -51973188 +3127 chr4 + 190214555 32861832 32861831 32861889 58 TTTGGAAAAAAATACTTACAGATCTAAATATATATATGTGTGTGTATATATATATATA chr4 + 94230402 8684314 8684313 8684371 8684314 8684313 8684371 58 TTTCAGAAATAATACATATAGCTCTATGTGTGTATCTGTGTGTGTATATATATAAATA ...x::...x.....x..:..x....x:.:.:...x..................x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 24177518 NA +3302 chr4 + 190214555 32861857 32861856 32861979 123 AAATATATATATGTGTGTGTATATATATATATATATATACACAT--ATATATACACATATATACACACATATATATACACATATATATACACATATATACACATATATATACACATATATACACA chr4 + 94230402 21109177 21109176 21109301 21109177 21109176 21109301 125 AAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .....x:x.x..x..:x.:..:..:.:.:.x.x.:.:x:.::..--....:...x..:......x.:::..:x.....::..:..:x:.::.x.x.:.::.:..:.:...:x.:..::..:.... 44M2I79M 72/123 58.5% 125/94230402 0.0% 2/123 1.6% 11752680 NA +3703 chr4 + 190214555 32861862 32861861 32861969 108 TATATATGTGTGTGTATATATATATATATATATACACATATATATACACATATATACACACATATATATACACATATATATACACATATATACACATATATATACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:........x.x.:.:x:::...x.....::..x:.:......x.:.:..:x:.:..:...:..:x..:::x.x.:.::.:..:.:..::x....::..:.... 108M 65/108 60.2% 108/94230402 0.0% 0/108 0.0% 11752668 NA +3538 chr4 + 190214555 32861883 32861882 32861964 82 ATATATATATATACACATATATATACACATATATACACACATATATATACACATATATATA---CACATATATACACATATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..:.:.:...::.....:..x...:x......:..........:.:.:.....x:x.x.x.---:....:x...x.:........ 61M3I21M 59/82 72.0% 85/94230402 0.0% 3/82 3.7% 9614161 NA +3027 chr4 + 190214555 32867532 32867531 32867599 68 TTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCTTTCCTTCCTTTTTTTTTTTTTTTCCCCAGATAG chr4 + 94230402 14767405 14767404 14767471 14767405 14767404 14767471 67 TCCTCCCACCAGCTCCCCCCAGCCCCCCCCCTTTTTCCCCCCCTTTTTTTTTTTTTTT-GCCAAATAG .:.....x..xx.:.:...:xx.::..::....:..:..::.................-x...:.... 58M1D9M 48/67 71.6% 67/94230402 0.0% 1/67 1.5% 18100127 NA +4369 chr4 + 190214555 32868071 32868070 32868306 236 GGGAGAGAAAGAAAGAAAAAAGTAAGAAAGAAGAAAG---AAAGGAAAGAAAGAAAGAGAGAGAGGGAAAGAAGAAAGA------GAGGGAA-----------AGAAGAA-----------AGAGAGGGAGGGAAAAAACAAAGAAAAAAGAAAGAAAGGAAGAAGGAAGGAAGAAAGGAAGGAAGGAGAGAGAGAGAGAAAGAAAGAAAAAAGAAAAAGAGAGAAAGAAAAAGAAGGAAGGAAGGAAGGGAG--GAAGGGACGAAGGG chr4 + 94230402 8397329 8397328 8397587 8397329 8397328 8397587 259 GGCAACGAGAATAAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATG----------AGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAG ..x.:x..:.:x....:.....:.:x..x:x..x...---..:........::x..:...:.:.x.:.x..x..:..:x------.x:.:..-----------..:....-----------...x..:.xx:...::..xx:...:.:...:.x:..:x.:.......x.:.x.----------..:x:....x:....:..:...x...:x.x....::x.x.:::x.:.......xx.....::.:.....--......xx:...:. 37M3I39M6I7M11I7M11I53M10D69M2I14M 144/226 63.7% 259/94230402 0.0% 43/226 19.0% 24470742 NA +3170 chr4 + 190214555 32868599 32868598 32868646 48 CTGTCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 + 94230402 23965212 23965211 23965259 23965212 23965211 23965259 48 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATAT ....x...:.::............:.x..:...........x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 8903387 NA +3067 chr4 + 190214555 32868605 32868604 32868648 44 CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 1495003 1495002 1495046 1495003 1495002 1495046 44 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATAT ..:.........x.:...............:.:..:...:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 31373602 NA +3009 chr4 + 190214555 32876614 32876613 32876662 49 AACAAATAAAACAAAAAACAAAGAACAAACAAAAACTAACAGCAGTAAA chr4 + 94230402 15763967 15763966 15764015 15763967 15763966 15764015 49 AAAAAATAAAACAAAAAACAGAGAACACAACAGAGCAAACAACAGTAAA ..x.................:......x.xx.:.:.x....:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 17112647 NA +11291 chr4 + 190214555 32879881 32879880 32880248 368 CTAATTTCTCACTTACAT-AGATTTCTTAGAACATCTGATA-----CTTTCTCTATTCCTTCCATGAGAAATAACATTGTAAATTGAGCTGTTAAACTGATTCATGCATAGACCAGCAAAAAAGGGCAGTAAGTGGCTCTGAATCTTTCATAAATGCGGCAGAAAAGATTTCTG-TCTGTGCTTACCCCTTA------------CCCCTGCTATTTTATGTCATAATGCATCATTACATACTGATGTTTGTTCCTGTGCAAGTCAGCAAAAAA-AAGGATTACATAGTGTATGCTGGCCCTTTTCCTTGAATTAACTATGTCACTTTTGATTTGTTATGTTATTGGACCATGTTTCAGGCCTTTTTAACACTGGCAACTATGGTACAA chr4 + 94230402 73344380 73344379 73344742 73344380 73344379 73344742 363 CTAATTTCTCATTTACCTCAGGAATCTTGACAAAGCtaataaataatattttttaattataCTGTTTGA--TAACACTGTCAATTGAGATGTTAAGCTGATTCACGGTTGTGTCAGCAAAAAACGTCATTAAGTGGCTTTGGATCTTTTGGAAATGCTTCAGGAAAATTTCAAGACCAGCATTTGCTCCCTAACTCTTTCTTATCACCTGCTATTTTATGTCATGTTGAATCATAACAGATTGATGTTTGTTTCTGT--ATGTCAGCAAAAAACAGGGATTGCATAGC---------CTCATTTCTTTGCATTAACTACATCAATATTTGTTTGTTATTTTTCC---CAATATTTCAAG---------CACTAGAAAATATATTAAAA ...........:....x.-..:xx....::x.x.x..:...-----:x..:.:..x.:x.x.::.xx..--.....:...x.......x......:........:.xx.:x::..........x.x..x.........:..:......::x......xx...:...:x..:xx.-:.x.:::..:.:..:..------------.x..................:x..x.....x...x.:...........:....--.x............-.:.....:.....:---------.:.x....:...x........::...x.x..x:........x..x::---.x..:.....:.---------....:.x..x...:x..x.. 18M1I22M5I23M2D103M1I17M12I53M2D14M1I14M9D47M3D12M9D20M 250/343 72.9% 363/94230402 0.0% 45/343 13.1% -40464499 -53765903 +3199 chr4 + 190214555 32884683 32884682 32884765 83 TTTCTTATTTTTTAAACTTCCTTCCTTCCTTTTTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTTCCTCCCTCCTTTCTT chr4 + 94230402 14674423 14674422 14674500 14674423 14674422 14674500 78 TTTCTTACATTCTAAA-----GCACTTTTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCCCCCCATTCCCTCAATTTTTCTT .......:x..:....-----x:x...::......:...::...:.........:.:x:...:..x....::.xx::...... 16M5D62M 54/78 69.2% 78/94230402 0.0% 5/78 6.4% 18210260 NA +3183 chr4 + 190214555 32884699 32884698 32884758 60 CTTCCTTCCTTCCTTTTTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTTCCTCCCTC chr4 + 94230402 7218317 7218316 7218376 7218317 7218316 7218376 60 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCC ...::..::..:.....x.....:..:.......:.:.::......:..x...::::.:. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 25666382 NA +12324 chr4 + 190214555 32888807 32888806 32889187 381 TAGAATATATCCTCCTCTCATATTCCAAGAA-AATAATATTTTCAAAACAAATTA--TCTTCATGTCTATTCAGTTCTCA----AAAGTACTTTGCTTATTC---CTCTACATAAAATTTTGA-TGGAATGGTGTCATTTGCTAATTTTTTTTGTAAATGCCTGCCTCTGGCAAGGAGCAATTTAAACACAAAGGATACAATGAAATCTTAATATGTGTCACTAATCAAGGATGTACACAGGCAGTCTG-TTTTTGAGAAGAACTGGTATAAACAGTTTGTTGCCTTAGGAAGACAGCAATCTGACCTAAATTAATATGAATTACCACAACATCATCAGAGAA--ACTGCCTTGTAATACAAACA-TTTCTATCTAGACCCCAAAGGTTCAGTCCA chr4 + 94230402 73348970 73348969 73349364 73348970 73348969 73349364 395 TAAGATATTTTTTCTTACCTTGCTTCTATAACAGTATAATTGTCAAAATAAATTACATCTCAAAGTCT-TTCACTTCTCAGCATAGGATTTTTTCCCTCTTTGCTCTCTACACAAAAACGCAAATGGAATAACACACTTTAATGAACTCTATTTTAAATGACTGCCTTAGGCAAAATGCAATTGAAGTACAAAGAATAAAATGAAACCTTAATACATGTCACTAATAAAAAATGTACAAATGGATTCTGATTTTTGACAAGAGCTGGTAAAAACAGCCAATTGCCTCAGGAAGATAGCATTCTAACCTAAATTATTATAGATAATTCTAGTGTCATCACAGTATGAGTATTTTATATCACATGCATTTTCCTTCTGAAGTCTACAGCCTCAATTCA ..::....x.::..:.x:.x.::.:.x.x..-.:..xx...x......:......--...:x.x....-....x......----.:::.x:...x.:.x..:---.......:....x:x::.-......:::::xx...:x.:.x:.:.x..x......x......:x.....::x......x..::......:...x.......:.......::..........x..::.......x.x.x.x....-.......x....:......x......::x:......:.......:....x...:..........x...::..x.::x:.:::......x..x.--.x.:::..:..x:...x:..-....:x...::.x:.:.x..x:...:.:.. 31M1I23M2I11M1D11M4I18M3I18M1I125M1I93M2I20M1I30M 261/380 68.7% 395/94230402 0.0% 16/380 4.2% -40460163 -53770239 +3109 chr4 + 190214555 32890942 32890941 32890993 52 CACTTTTACTTATATATATGTGTGTGTGTGTGTGTGTGTGTATATATGTAGA chr4 + 94230402 27325508 27325507 27325559 27325508 27325507 27325559 52 CACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAA ...:.xx.....x....:.........:.........::...:....:.::. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 5565434 NA +3798 chr4 + 190214555 32917830 32917829 32917965 136 TCTTTCTTTTCTTTCCTTCTTTCTTTCTT-TCTTTTTCTTTCTTTCTCTTCCTTTCTCTCTTTTCTTTCTTTATTTCTTTCTTTCCTTTCTTTCTCCCCTTCCTTCCTTCC--TTCCTTTCTTTTTCTTTCTTTCTTCC chr4 + 94230402 21408813 21408812 21408951 21408813 21408812 21408951 139 TTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCCC .:..:.....:x:.xx........x.:..-............xxx..xx.:.:::.:...:.::..x:xxx:xx..........:.........:...:.xx....x:.x.--x..:x:.:..:.....x.:..:::.. 29M1I81M2I26M 87/136 64.0% 139/94230402 0.0% 3/136 2.2% 11509017 NA +3477 chr4 + 190214555 32917866 32917865 32917974 109 CTTTCTTTCTCTTCCTTTCTCTCTTTTCTTTCTTTAT-----TTCTTTCTTTCCTTTCTTTCTC-----CCCTTCCTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTCCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:....:.:..:.xx.x......:.:...x.-----.....::x..:.xx.....x..-----..:..x...::.:x.xx:......:.::.:.::......:.......::. 37M5I22M5I50M 73/109 67.0% 119/94230402 0.0% 10/109 9.2% -30779251 -63451151 +4318 chr4 + 190214555 32917889 32917888 32918029 141 TTTTCTTTCTTTATTTCTTTCTTTCCTTTCTTTCTCCCCTTCCTTCC------TTCCTTCCTTTCTTTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC---TTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTC-ACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:-.:.x..:..:..:...:....x...x.::x...::------...:...:x......x.x..:x...:.x:....:...:...:.:xxxx..:x...:..---..:...x::.:...::.........::.:.x..... 11M1D35M6I58M3I36M 93/140 66.4% 149/94230402 0.0% 10/140 7.1% -17258377 -76972025 +3276 chr4 + 190214555 32917912 32917911 32917988 77 TCCTTTCTTTCTCCCCTTCCTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 76521921 76521920 76521997 76521921 76521920 76521997 77 TCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTC ...................:.x....x...x:.:.:xx.:...:....:..x....:x...:x:::x..x:..::.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -43604009 -50626393 +3004 chr4 + 190214555 32917952 32917951 32918043 92 TCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTT chr4 + 94230402 57372027 57372026 57372118 57372027 57372026 57372118 92 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTT .:.......::.:x.:...x:.:......:::.:..xx:.x..x::.........:...::...x....:x:.xx..x.:.:..x.x..x.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% -24454075 -69776327 +4050 chr4 + 190214555 32918005 32918004 32918128 124 CTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTC-TTTCTTCCTTTTTATTT ....x..:..:..:...:.xx.x...::.::.....:::..x.....::x....xx.....x.:.:xxx:....x.:...:.x:xx.:..::..:::::.......-.............x... 106M1D17M 79/123 64.2% 123/94230402 0.0% 1/123 0.8% -30779112 -63451290 +3574 chr4 + 190214555 32918019 32918018 32918117 99 TTTTCTTTCTTTCTTTCTTTTTC---------TTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTT chr4 + 94230402 36195259 36195258 36195366 36195259 36195258 36195366 108 TTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTT ...:...:x.x.:....x.:...---------..........x:........:....:..:x...x....xxx..:x:.:x...x.....:..x:.:::......x.. 23M9I76M 69/99 69.7% 108/94230402 0.0% 9/99 9.1% -3277240 -90953162 +3168 chr4 + 190214555 32918021 32918020 32918132 112 TTCTTTCTTTCTTTC--TTTTTCTTTCTTTCTTTCTTTTCTTT------CTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTTTTCTT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x.....:--..:.:..x::....:x...x:.:...------..:..x.:::.::::.:...........:.:.x::.xxx.:::....x:.x.........:x.:.:..... 15M2I26M6I71M 71/112 63.4% 120/94230402 0.0% 8/112 7.1% -50058610 -44171792 +3055 chr4 + 190214555 32918039 32918038 32918128 90 TTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTT---TCTTTTCTTTTCTTCCTTTTTCTTT chr4 + 94230402 84818197 84818196 84818283 84818197 84818196 84818283 87 TTCATTCGTGCTTACTCTCCTTTTGTCCTTCCTCTTCTATTCTGTTCC------CTCTTCCTTGTGGGTTTTTTTTTTTTTTCCAGCTCCTTT ...x...x.x...x..:.:....:x.:...:..:....x...:x....------:........x.---.:....:....:....xx:.:.... 48M6D11M3I25M 61/84 72.6% 87/94230402 0.0% 9/84 10.7% -51900158 -42330244 +3799 chr4 + 190214555 32919806 32919805 32919888 83 CACAGTGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCCGAGGTCGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...........::.--......:...........::........x.xx.x...x::.......:.:.:..x::x:..::..:. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -43113391 -51117011 +3172 chr4 + 190214555 32921091 32921090 32921154 64 TGGTTCAGAAGGGAAATTGTCTCTCTTTTTCTCTCTCTCATTCTGTCTTTATAGTGACTTAAAA chr4 + 94230402 93743421 93743420 93743484 93743421 93743420 93743484 64 TGGTTCAGGCCAGAGATTCTCTCTTTTTTTCTCTCTCTCTCTTGTTCTTTATATTGTTCTAAGA ........:xx:..:...x.....:..............x:.:xx........x..x::...:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -60822330 -33408072 +3230 chr4 + 190214555 32926359 32926358 32926458 100 GTGGTGGCACACATGTGTAATCCCAGCTACATGAGAGGCTGAGGTGGGAGGATTGCTTGAACCTGGGAGGCAGGGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......-----..:.....:.:........x...:........x:xx.x.:.x::........::.:..x:xx...:..:..------..x..x...... 6M5D71M6D12M 64/89 71.9% 89/94230402 0.0% 11/89 12.4% -43106842 -51123560 +3442 chr4 + 190214555 32928287 32928286 32928353 67 AGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....::.::.--......:...........::...:....x.xx.x...x.:...........:.. 11M2D54M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% -43104913 -51125489 +3137 chr4 + 190214555 32928423 32928422 32928492 70 TCAAAAAAAAAAAAAAAAAAAAAAAGAGAGAAAAAAGAAAAGAAAAAGAAAAAGAAAAAAAAATTGTGAA chr4 + 94230402 89572264 89572263 89572333 89572264 89572263 89572333 70 TCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGATTAAAAATCTGAA ....x.:..............:.:.......:..x..x....:x.x.:x....:x:.xx....x.x.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -56643841 -37586561 +3220 chr4 + 190214555 32928425 32928424 32928514 90 AAAAAAAAAAAAAAAAAAAAAAAGAGAGAAAAAAGAAAAGAAAAAGAAAAAGAAAAAAAAATTGTGAATTACTTGCTCATGACACGTATT chr4 + 94230402 47460658 47460657 47460747 47460658 47460657 47460747 90 AAAAAACAAAACAAAGAAAAGGGGGGGGTAAGCAGCAAAGAAGAAAGAGACAAAAGCAAGATTTCGGACTGCATGTTTTTGGCACCTTTT ......x....x...:....:::.:.:.x..:x..x......:..::.:.x:...:x..:...x:.:.:.:.x..:.:x..:...x.x.. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% -14532233 -79698169 +3741 chr4 + 190214555 32939670 32939669 32939784 115 ATATATAATATATGACATATAATATTTATATATAAATATATAATA--TATGACATATAATATATATATAAATATATATAATATATAACATATAATATATATATAAATATATATAATA chr4 + 94230402 46018831 46018830 46018938 46018831 46018830 46018938 108 ATAGATCGTATATGGTATATGCTGT---------GATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATA ...x..x:......::....:x.:.---------:......:...--....:.............x.x:.xx.....:.:..:...:x.....x..xx::...:x...x....:... 25M9D11M2I70M 76/106 71.7% 108/94230402 0.0% 11/106 10.4% -13079161 -81151241 +3105 chr4 + 190214555 32949263 32949262 32949339 77 ATATATACATGTATATACACATATATATACATATATGTATACACATATATATATGTATACATATATATATATACATA chr4 + 94230402 76376858 76376857 76376934 76376858 76376857 76376934 77 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACA ..::....x.x.x..:.:.:::.x.x......:....:.....x.xx..:x.:...........:.::.....x.:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -43427595 -50802807 +3663 chr4 + 190214555 32969767 32969766 32969833 67 TGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGTGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........:.........x.xx.....x.:.........:.:..x:xx:..:..:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -43063444 -51166958 +3078 chr4 + 190214555 33023123 33023122 33023212 90 TGCGTTTACATATGTATGTATATATATGTCTCTCTGTATATATATATGCGCGCACACACACACACACACACATATATGTTCCTTATTCTT chr4 + 94230402 58675366 58675365 58675455 58675366 58675365 58675455 90 TGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTT ..::...:x.:x..x..x.x..:.:..x.:.x.x..:.........::.x.::.::::.........x..x......x.xx.:...x... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -25652243 -68578159 +3706 chr4 + 190214555 33027094 33027093 33027175 82 GGTGACACA------TGCGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...:...------...:.x....:.:...........:.........x.xx.x...x.:.........:.:..x:xx:..:..:.. 9M6I73M 60/82 73.2% 88/94230402 0.0% 6/82 7.3% -43006096 -51224306 +3090 chr4 + 190214555 33045185 33045184 33045227 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 6039189 NA +3075 chr4 + 190214555 33052543 33052542 33052595 53 ATGTGTATACACACACACACACACGTACACACACACACACGTGCACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ......:..::........:x:.:.x...:.:::......:.:.......... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 9804821 NA +3121 chr4 + 190214555 33095693 33095692 33095762 70 TTCACATATATATTATACACACACATATATATATTTATATATATATATATATGCCCACACAAAAGAAAGA chr4 + 94230402 69228478 69228477 69228547 69228478 69228477 69228547 70 TTCTCATCCATATAACAGATACATATATATCTGTTTATACACATATGTATAAAACTGTGCAAAGAAAAGA ...x...x:....x.:.x.:...:......x.:......:.:....:....x:x.::::....::..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -36132785 -58097617 +3404 chr4 + 190214555 33101551 33101550 33101642 92 AATGATATTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTC---------TTTCTTTCTTTCTTTC-------TCTCTCTTTCTTCTTT chr4 + 94230402 31524840 31524839 31524947 31524840 31524839 31524947 108 AATGATTTTCTCTGTTTTTCTTTGTTGCTGTTGTTGTTTGGGGTTTTCTTTCTTTTCTTCTCCTAATCATTTCTTTTTTACTTTTACTGCAGTCTCTCTTTCATCCCT ......x..:...x.:.......x..x..x.:x..x...xxxx:...........:....---------.......:..x....:-------..........x..::. 60M9I16M7I16M 70/92 76.1% 108/94230402 0.0% 16/92 17.4% 1576711 NA +3326 chr4 + 190214555 33101556 33101555 33101675 120 TATTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTTCTCCTTTTTT chr4 + 94230402 63697120 63697119 63697239 63697120 63697119 63697239 120 TATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x..:.:.:x.xx::..::...::.:.x.:..:......:..::..x... 120M 69/120 57.5% 120/94230402 0.0% 0/120 0.0% -30595564 -63634838 +3470 chr4 + 190214555 33101560 33101559 33101656 97 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT--CTTTCTTTCTTTCTTTCTCT-CTCTTTCTTCTTTCTTCTTTCTTGTCT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx....--....:.:x.xx.........-.:..:.:..........:..:..:.:. 50M2I20M1I27M 67/97 69.1% 100/94230402 0.0% 3/97 3.1% -30595580 -63634822 +3339 chr4 + 190214555 33101564 33101563 33101665 102 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCT--TCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx...:...:..::..:.:........--..:.....x... 88M2D12M 65/100 65.0% 100/94230402 0.0% 2/100 2.0% -30595576 -63634826 +4018 chr4 + 190214555 33101566 33101565 33101691 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:......:x..::.:.x....xx...:.x....xxx:....x:.:....x::x::...:...::.::.....:......:.:..::x... 13M3D110M 78/123 63.4% 123/94230402 0.0% 3/123 2.4% -30595551 -63634851 +3417 chr4 + 190214555 33101574 33101573 33101695 122 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....::...:.:x..::.:.x....xx...:.x....xxx:...:x:.:..x:x:xx.:.:.:.....::.:.........:.:.:....x.:. 13M1I109M 74/122 60.7% 123/94230402 0.0% 1/122 0.8% -30595543 -63634859 +4235 chr4 + 190214555 33101575 33101574 33101730 156 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCTTATCTTTTTCTTTCTTTTCTTCTTTTTTTT chr4 + 94230402 50176267 50176266 50176413 50176267 50176266 50176413 147 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTC---------TTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCT .....x...:x..x:::.:.......:....x:::x:::x:..:.x:x..x:...:...x.::.:.x.x...x..:.......:........---------...xxxx.::x.:.::.:x.......:...::......::.....:..::x..:. 92M9D55M 90/147 61.2% 147/94230402 0.0% 9/147 6.1% -17074692 -77155710 +4302 chr4 + 190214555 33101647 33101646 33101816 170 TTTCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCTTATCTTTTTCTTTCTTTTCTTCTTTTTTTTCTTTCTTTCTTCCCTTCCTTCTTGTTTGGTTGCTTTTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCATCCCTCCCTCCTTCCTT chr4 + 94230402 50176266 50176265 50176426 50176266 50176265 50176426 161 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCT---------CCTCCATTCTTCACATATCCCTT ...::.....:x:.x..:..:::.:..::..:x.:.x::.x:...:x.x..x:.:x.::.x......x.x...x.:...x.:..............xxxx..:x.:.x::::x..x...x.:......:..:...:..---------.......:.:..x.x:x.:.... 138M9D23M 98/161 60.9% 161/94230402 0.0% 9/161 5.6% -17074619 -77155783 +3091 chr4 + 190214555 33101649 33101648 33101700 52 TCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCT chr4 + 94230402 35922899 35922898 35922950 35922899 35922898 35922950 52 TCTTTTCCTTTTTTTTTCCCCCTTTTTATATTTCCCCCCTTTTTTTTTTTTT ....x..:.....:....:..:.....x.x.....::......:.:....:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -2821250 -91409152 +3246 chr4 + 190214555 33101664 33101663 33101748 85 TTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCTTATCTTTTTCTTTCTTTTCTTCTTTTTTTTCTTTCTTTCTTCCCTTCC chr4 + 94230402 71033451 71033450 71033535 71033451 71033450 71033535 85 TTCTCCTAATTTCTTTTTTTTTCTTTTTTTCTGTTGTCTGCTCTTTATTGCTCTTACTGTTTTGTTTCAGTCTGTTTTCCCATTC .......xx...:.:...::...:....:...x..x.:xx..:...x..x..:..x:.x....x....xx...x.:.....x.:. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% -37931787 -56298615 +3639 chr4 + 190214555 33101724 33101723 33101844 121 TTTTTTTCTTTCTTTCTTCCCTTCCTTCTTGTTTGGTTGC--------TTTTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTC--CATCCCTCCCTCCTTCCTT------CTTTTTTCCTTCCTTCCTTCCTTTTTCC chr4 + 94230402 53764492 53764491 53764628 53764492 53764491 53764628 137 TTGTTTTTAGGCTCTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..x....:xxx..:.:..:x:x.:x..:.x....:...x.--------:.......:::..:.:......::..........--..:..x.::.:....x...------.....:..x...:.x:.x...:..:... 40M8I34M2I19M6I28M 82/121 67.8% 137/94230402 0.0% 16/121 13.2% -20662768 -73567634 +3300 chr4 + 190214555 33101803 33101802 33101879 77 CTCCCTCCTTCCTTCTTTTTTCCTTCCTTCCTTCCTTTTTCCTTCCTTCCTTCCATTTCCTTCCTTCCTCCCTCCCT chr4 + 94230402 83645382 83645381 83645450 83645382 83645381 83645450 69 CTCCCTCCCTCCTTCATTTTTCCCCCTTTCC------TTTCCTTTCCTACTCCGATTCCCTTC--TCCTACTCCTCT ........:......x.......::.:....------.......:.:.x..:.x...:.....--....x.::.:.. 31M6D26M2D12M 54/69 78.3% 69/94230402 0.0% 8/69 11.6% -50543579 -43686823 +3300 chr4 + 190214555 33101878 33101877 33101993 116 CTTCCTTCCTTCCTCCTTTCTTTCTTTCATTCTTTCTTTCTTTATCAT--------TCTCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTTTTCTTATCTTTATTTTTCTTCCTTT chr4 + 94230402 48874868 48874867 48874991 48874868 48874867 48874991 124 CTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ..::....:.:x.x:x.:.....:.x.x.x.....x...:::.x.:..--------.x.........x.:.x..x:..:::.:..:.x::..:...x.:....x..x.....x.:....:.::. 48M8I68M 73/116 62.9% 124/94230402 0.0% 8/116 6.9% -15772990 -78457412 +3557 chr4 + 190214555 33101893 33101892 33102001 109 CTTTCTTTCTTTCATTCTTTCTTTCTTTATCATTCTCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTTTTCTTATCTTTATTTTTCTTCCTTTCTTTTCTT chr4 + 94230402 36195258 36195257 36195366 36195258 36195257 36195366 109 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTT .....:...x.x:x..::x....:.xx..x....:........x:....:.:......:..:x..:x....xxx...x..:..:.x:x.:::.:x:..::......x.. 109M 69/109 63.3% 109/94230402 0.0% 0/109 0.0% -3093365 -91137037 +3146 chr4 + 190214555 33101899 33101898 33101956 58 TTCTTTCATTCTTTCTTTCTTTATCATTCTCTTTCTTTCTTTTTTCTTTTTCTTTCCT chr4 + 94230402 43923906 43923905 43923962 43923906 43923905 43923962 57 TTTTTTTCTTCTTT-GTTCTTTATCATTATTATTCTTTCTTCTTTCTTCTCCTTTTCT ..:...:x......-x............x.:x.........:......:.:....:.. 14M1D43M 46/57 80.7% 57/94230402 0.0% 1/57 1.8% -10822007 -83408395 +3780 chr4 + 190214555 33101901 33101900 33102033 133 CTTTCATTCTTT---CTTTCTTTATCATTCTCTTTCTTTCT--------------------------------TTTTTCTTTTTCTTTCCTTCCTTTT--TTCTTTTCTTATCTTTATTTTTCTTCCTTTCTTTTCTTCTTTCTCTTTCTTTTCTTCTTTCTTTTTCTTT chr4 + 94230402 48601630 48601629 48601799 48601630 48601629 48601799 170 CTTTTGTTTCTCAGACTTGTTTTTTCATTCTTTTCCTTTCTAGGACACAGCTTTCAAGTACTCACATAGCAGGCTTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTTTT ....::..::.:---...x:...x.......:..:......--------------------------------:.......:x..:..:xx.:...::--....:..:..x:........xxxx.x.........:..:..:..x...:......:x.::.::...:... 12M3I26M32I25M2I70M 92/133 69.2% 170/94230402 0.0% 37/133 27.8% -15499729 -78730673 +3404 chr4 + 190214555 33102098 33102097 33102170 73 CTTCCTTCCTCCCTCCTTCCTTTTTCCTCCCTTCCTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCT chr4 + 94230402 83645378 83645377 83645450 83645378 83645377 83645450 73 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTCT .:.x..:............x.......:..:......:.:....:.x.:::xx....:.:..:.:x::::... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -50543280 -43687122 +3194 chr4 + 190214555 33102124 33102123 33102193 70 CTCCCTTCCTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCT chr4 + 94230402 40564846 40564845 40564915 40564846 40564845 40564915 70 CTCTCTCCTTCCCAGTTCTTGCTGTGCTGCCTAACTTCCTTTTTTCCTTCTTTCCTCTTCTTATCTTTTT ...:..:.:.:..xx.....x.:x.x..x...xx.......:....:.........::.:.:x.....:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -7462722 -86767680 +3072 chr4 + 190214555 33162538 33162537 33162689 152 CTCTCTCCAAGCTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTC-----------TTCTTCTTTTTTTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTTTCT chr4 + 94230402 33237597 33237596 33237759 33237597 33237596 33237759 163 CTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTT ..:..:...xx..x::.x::..xx:....xx.:..x::...:::x:....:x:.x..:-----------..::..:...x.::..xx...x.......x.:.:x.:.:...:x...:...x::.::::.:.:.:.:..x:....x....x...:x...:.::. 58M11I94M 85/152 55.9% 163/94230402 0.0% 11/152 7.2% -75059 -94155343 +3450 chr4 + 190214555 33162551 33162550 33162702 152 CTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTT--TTTTCTTCTTCTTTTCTTCTTC-TTCTTCTTCTTTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTCTT-----CTTCTTCTTCTTCTTTTCTTCT----TCTTCTTTTT chr4 + 94230402 21704811 21704810 21704974 21704811 21704810 21704974 164 CTTCTGTGCTGCTTCTGCTCTCTCTGCATTCTGTTCTGCTGCTTCCTTTTCCTTAAGTTTCTCAAGCTTCTTTTTTTCATTCAGCTTCTTTGCTTCTTTTGCTTTCATTGCTTTCCAGGTTTTAAAAGATGCATTTGCTTCCTCTCTTTTAACAGCTTCTTTCT ...:.x.x..x.....x..:::...x.x.::.x:...x..x....:.:...:..--x.....:xxx...:.:..:...-...xx.......x......:.x....:x..x:.:.:.xxx.:..-----x.x.x.:.x....:.:....:.----x.......:. 54M2I22M1I44M5I22M4I10M 100/152 65.8% 164/94230402 0.0% 12/152 7.9% 11457740 NA +3105 chr4 + 190214555 33162576 33162575 33162631 56 TCTTCTTCCTCTTCTTCTTCTTCTTCTTTTTTTCTTCTTCTTTTCTTCTTCTTCTT chr4 + 94230402 13063272 13063271 13063327 13063272 13063271 13063327 56 TCTGCTCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTTT ...x..:...x...:....::.:..:..........:.:..x...:...:..::.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 20099304 NA +3009 chr4 + 190214555 33162614 33162613 33162673 60 TCTTTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTCTTCTT chr4 + 94230402 13063267 13063266 13063326 13063267 13063266 13063326 60 TCTGCTCTGCTCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTT ...x:...x..:.:.x...:.....::..:..:..:..:.:...:.x...:....:.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 20099347 NA +3145 chr4 + 190214555 33162633 33162632 33162747 115 TTCTTTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTTTTCTTCTCCTCCTT-CTCCTCCTTCTCCTGCTTCTCC--------TCCTTCTCCTC chr4 + 94230402 40895481 40895480 40895603 40895481 40895480 40895603 123 TTTTTTGTCTTTTTGTCTCTCACTCTTGTAATTCCCTTTTTCTTCCTCATTTTTGCTTC-TCTTCCTATGCAACTCTCACTCGCTTCCCATTCTCCTGCCAAACCTGAAAGCTTCCTTCTCTTC ..:...x::.:..:x...:.:x:....x.xx...:...:......:..x.:...x....-.....:.x.x.xx...::x..:-..:.:.x.........:xxx..--------........:.. 59M1D22M1I22M8I11M 77/114 67.5% 123/94230402 0.0% 10/114 8.8% -7732848 -86497554 +3005 chr4 + 190214555 33165508 33165507 33165557 50 CACACTGAAAACAAAACAACAGCAACAACAACAACAAAAAATCCTGACAA chr4 + 94230402 49372048 49372047 49372097 49372048 49372047 49372097 50 CAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAACCCAATAA ..x..x:.......x.........:.........x......x..::.:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -16206540 -78023862 +3922 chr4 + 190214555 33179776 33179775 33179930 155 CTAAATATATATATACACACACACACACATACATGTAAATACACACACA-CAACATGGAATACTGTGATATATGTGTGTGTATATACACACACACATATATGTATATCACATATATGTGTATATATATATACACACACACACACACATATATGTGT chr4 + 94230402 54005584 54005583 54005733 54005584 54005583 54005733 150 CTTGACATAAACCTACAATTCCCAAAACATGTGTGTAAACATATAGACAACAACATTTA-----GTTACTTATGTGTGTA-ATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGT ..x:.:...x.:x....xx:x.xx.x....:::......:.:.:.x...-......xx.-----..x.:x.........:-..:x.::..x.xx..xxx.xx.....::x.:.:..:.....x..........:.............x.x..x... 49M1I9M5D16M1D75M 100/149 67.1% 150/94230402 0.0% 7/149 4.7% -20825808 -73404594 +3007 chr4 + 190214555 33225332 33225331 33225393 62 TACTGGATACTGTGGAATTATTATGTTGTTGTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTT chr4 + 94230402 10099099 10099098 10099160 10099099 10099098 10099160 62 TATCTGATACCAAACTATTTTGCTGTTGTTGTTTTTTTTGTGTTTTTTGTTTGTTTGTTTTT ..::x.....::x:xx...x.xx..................x......x.......x..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 23126233 NA +3113 chr4 + 190214555 33236951 33236950 33237025 75 AAAGGTGAAGATAAAGAAACAGAAGAGAACAGAAAAGAAAAAGGGAATAATGGATATGAGAAGAGAAGGAAAGAG chr4 + 94230402 29483219 29483218 29483293 29483219 29483218 29483293 75 AAATGTTAATTTAATTAAACAAAGAAGAACAGAAAAGAGAAAGAACTGAGAGGAAATGGGAAGAGAGATAGAGAG ...x..x..xx...xx.....:.::.............:....::xxx.:x...x...:.......::x.:.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 3753732 NA +3368 chr4 + 190214555 33267034 33267033 33267104 71 GAAAGCACTTTATTTTTTATTTTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTA---GATGGAGA chr4 + 94230402 44980294 44980293 44980367 44980294 44980293 44980367 74 GAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAGA ...x.:.x..:....xx:x..::..:.........:x.:............:.........x.---....:... 63M3I8M 54/71 76.1% 74/94230402 0.0% 3/71 4.2% -11713260 -82517142 +3353 chr4 + 190214555 33283147 33283146 33283247 101 TAAACCCAGGCAATCCAATTTC-AGAGCCAGAAAACATGGGTACTATAAAACCTACCTTTTATGTGAAATACACACACACACACACACACATATATATACAT chr4 + 94230402 67665766 67665765 67665865 67665766 67665765 67665865 100 TAAATGTAAATAATTTACTTTCTCAAGCCAGGCAATATGATTCAGACAAAGGTT--TTGTAATGTGTAATATATACATACACACACACACATATATATAAAT ....:x:.:::...::.x....-x:......:x..:...:x.xxx.:...:x:.--:.x.x.....x....:.:...:.....................x.. 22M1I31M2D46M 68/99 68.7% 100/94230402 0.0% 3/99 3.0% -34382619 -59847783 +3081 chr4 + 190214555 33283189 33283188 33283249 61 CTATAAAACCTACCTTTTATGTGAAATACACACACACACACACACACATATATATACATAT chr4 + 94230402 40978364 40978363 40978420 40978364 40978363 40978420 57 CTATAAAGGATGCC----AAATGAAATGCACACACACACACACACATATGTATATATTTAT .......:xx.:..----.x:......:..................:..:......:x... 14M4D43M 46/57 80.7% 57/94230402 0.0% 4/57 7.0% -7695175 -86535227 +3081 chr4 + 190214555 33300443 33300442 33300487 45 TTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTCAGACCAGGGATTA chr4 + 94230402 18767290 18767289 18767334 18767290 18767289 18767334 45 TTTTACTCTTTTGTTTGTTTGTTTGTTTTCTCACACCAGTGATTA ....xx.:.....................:...x.....x..... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 14533153 NA +3271 chr4 + 190214555 33320063 33320062 33320177 115 GTCTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTTTCTTTCTCTCCTTCTTTCTTTCTC--TCTTTCTTTCTTCTGCCCTCCACTCTTTTTGTTT chr4 + 94230402 63697137 63697136 63697239 63697137 63697136 63697239 103 GTGTTTTCTCTTTTTTTCCTCATTCTTC---TATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTC-----------CTTTTTATTT ..x......:.:...:.::..x.....:---.x....xx.....x....xxx.::..x....:..x.xx.......:..:.--::...........-----------......:... 28M3D50M2I13M11D10M 74/101 73.3% 103/94230402 0.0% 16/101 15.8% -30377074 -63853328 +3048 chr4 + 190214555 33320070 33320069 33320151 82 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTTTCTTT----------------CTCTCCTTCTTTCTTTCTCTCTTTCTT chr4 + 94230402 72001429 72001428 72001526 72001429 72001428 72001526 98 CTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTGAAATACCCTCCCCATCTGCCTTTCATTTGCTTTT ...:.:....x:..::.x...:...:.:...:.......:...:....:....x.----------------...:..x...x:.....x:.:x:.:.. 55M16I27M 57/82 69.5% 98/94230402 0.0% 16/82 19.5% -38681359 -55549043 +3182 chr4 + 190214555 33325295 33325294 33325360 66 GGCAGGGAGGAGAAGAGAAGGGAAGAGAAGAGAGGAGAAGAAAAGAGAAGAGAAGAGAAGAGAAGA chr4 + 94230402 80644406 80644405 80644471 80644406 80644405 80644471 66 GATGGGGAGGGTAAGAGCAGGGGAGAGATTACAGGAGAACAAAGGAGGAGGAATGAGATGAAAGGA .:::......:x.....x....:.....xx.x.......x...:...:..::.x....x..:.:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -47319111 -46911291 +5088 chr4 + 190214555 33352328 33352327 33352432 105 GATAAAAAATAAATATAAATTCTATCT---CTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGACAGAGAGAGAAAGAGA chr4 + 94230402 75248023 75248022 75248130 75248023 75248022 75248130 108 GGCACAAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaaga .::.x.....x.x:.:...x.xx...:---.................x..................x.x.x.x.x...........:.:.:.x...:...:.:.:... 27M3I78M 80/105 76.2% 108/94230402 0.0% 3/105 2.9% -41895695 -52334707 +3437 chr4 + 190214555 33352337 33352336 33352388 52 TAAATATAAATTCTAT------CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601282 12601281 12601339 12601282 12601281 12601339 58 TATATTTAAATACTGTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..x..x.....x..:.------.........................:.......... 16M6I36M 47/52 90.4% 58/94230402 0.0% 6/52 11.5% 20751055 NA +4619 chr4 + 190214555 33352338 33352337 33352432 95 AAATATAAATTCTATCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGACAGAGAGAGAAAGAGA chr4 + 94230402 75248040 75248039 75248134 75248040 75248039 75248134 95 AAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaaa .....x.xx:.::x..................x................x.x.x.x.x.x.x.......:.:.:.:...x...:...:.:.:.:. 95M 70/95 73.7% 95/94230402 0.0% 0/95 0.0% -41895702 -52334700 +5750 chr4 + 190214555 33352339 33352338 33352432 94 AATATAAATTCTATCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGACAGAGAGAGAAAGAGA chr4 + 94230402 75248039 75248038 75248132 75248039 75248038 75248132 94 AAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaa ..x......:..x:....................................x.x.x.x.x.x.........:.:.:.:.x.:...:.......:. 94M 76/94 80.9% 94/94230402 0.0% 0/94 0.0% -41895700 -52334702 +3002 chr4 + 190214555 33352352 33352351 33352386 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 20751047 NA +5052 chr4 + 190214555 33352357 33352356 33352432 76 CTCTCTCTCTCTCTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGACAGAGAGAGAAAGAGA chr4 + 94230402 75248053 75248052 75248128 75248053 75248052 75248128 76 CTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaa ...............x.x..................x.x.x.x.............:.:.x.:...:.......:. 76M 64/76 84.2% 76/94230402 0.0% 0/76 0.0% -41895696 -52334706 +3314 chr4 + 190214555 33368547 33368546 33368601 55 TAACATACATATATTAC---TTTTCTTGAGAAATAAAAAATATATACTGAGTAAATAT chr4 + 94230402 29649343 29649342 29649400 29649343 29649342 29649400 58 TAACATATATGTCCTCCATTTTTTTTTGAGAAATAAAAAGTATGTGCTGAGTAAATAT .......:..:.x:.x.---....:..............:...:.:............ 17M3I38M 46/55 83.6% 58/94230402 0.0% 3/55 5.5% 3719204 NA +3003 chr4 + 190214555 33388651 33388650 33388698 48 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:......x........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 31893651 NA +3126 chr4 + 190214555 33388653 33388652 33388699 47 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495046 1495000 1494999 1495046 47 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATAT ...x.:.........x.:...............:.:..:...:.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 31893653 NA +3069 chr4 + 190214555 33391877 33391876 33391930 54 AATCATAAGATGTATTTATTTTATATATATATACATGTGTGTATGTGTGTGTAT chr4 + 94230402 49681656 49681655 49681709 49681656 49681655 49681709 54 AACAGTAAGTTGTACACATTTTATATAAATATATATGCGTGTGTGTGTCTGTAT ..:x:....x....:x:..........x.....:...:....:.....x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -16289779 -77940623 +3058 chr4 + 190214555 33391911 33391910 33391962 52 ATGTGTGTATGTGTGTGTATGTGTGTGTGTCTGTGTGTGTTCATAGAGAAGC chr4 + 94230402 3414942 3414941 3414993 3414942 3414941 3414993 52 ATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGAGC .......:......x..........::::x...:......x....x.::... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 29976969 NA +3273 chr4 + 190214555 33406527 33406526 33406591 65 TATATTTTTATATAATATATATACATACACATACACACACACACACACACACACACACACACACA chr4 + 94230402 46140842 46140841 46140906 46140842 46140841 46140906 65 TATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...xx....:.:.............:....x:x....:........::::.:.:...x..x:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -12734315 -81496087 +3044 chr4 + 190214555 33410722 33410721 33410771 50 AAATGAGATTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGCCTCTAGG chr4 + 94230402 27996698 27996697 27996747 27996698 27996697 27996747 50 AACTGAGGTGAGGTTTTTGTTTGTTTGTTTGTTTTTTTCTTTCTTCTAGG ..x....:.xx.x.....................x...:..x.:...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 5414024 NA +3837 chr4 + 190214555 33417422 33417421 33417654 233 TTGGAGATGATTTATATAT---AATTCCCCATAAAACCTGATGAAAA-CATATACATTTAAGATTTTCTCCAGTTTTATTATTTCATTATTTCATTTCTTCCTATTTACCTTTCTATCTCTTTCCCTCAGTTTTGTTTTCTCTCTACTTAACTCATCTTCCTTTCCTTCTTTTTCTTT---TCTTTTCTTTTTTTCTAAATTA----AACTGTGTTGCAAATCCAGTGTCAGTTACTGTGCATA chr4 + 94230402 36985432 36985431 36985670 36985432 36985431 36985670 239 TTCAAGATATTTAATATACCTGAGTTACTGATACCTTCTTATGTAATTCATACTGATTTAATTTTTTTTC-----TTATTCACTGAATATCTCACTTCTTCCTTTTTACCATATAATTTCTGTCTCCCCTTCTGACTATAATACAATGCAAAACGTATTCCTATCTCTCCTTTTCTTTTTGTCTTGCCTTCCTTATGAAATCAGAACAGCCTTTTACTAATTCCACAGTTGGATATTGTGAATA ..x:....:x..x.....:---.:..x.:x...xxx:..x...x..x-....:xx......xx....:..-----.....xx:.x.x...:...:........x......x.x:x..:...x..:.:.xx.:.x::.x.xx:x.x.:x:..xx.:.x.....x..::..:........---....x:...::..x:x....:.----.:.:x.x.xx:..x....xx..::.x..:....x... 19M3I25M1I22M5D103M3I22M4I37M 143/228 62.7% 239/94230402 0.0% 16/228 7.0% -3568010 -90662392 +3242 chr4 + 190214555 33427528 33427527 33427633 106 CCTATTTTACTGTTTTTCTTAGAGTTGGCTCTGAAAATGGATTTTAAAAATGGCTAA------------TGTCCTCTGATAGATATATCTTTAATCAAAATAATAACAAAAATAATAT chr4 + 94230402 42223065 42223064 42223174 42223065 42223064 42223174 110 CCCATGTTGCCTTTTATCTGAATGTTTG-TCTGAAAGCAGC-------AACAGCTAAATCTCTACTGTATATTCTTTGATGGATATATCTTTAATCAAAGTAAGAACAGAAGAACTAT ..:..x..:.:x...x...x.:x...x.-.......:::.x-------..::.....------------.:.:..:....:..................:...x....:..:x.x... 28M1D12M7D9M12I49M 72/98 73.5% 110/94230402 0.0% 20/98 20.4% -8795537 -85434865 +35223 chr4 + 190214555 33437372 33437371 33438009 638 TATTTATACTTATTTAGT---------TTGGAAAATGCTTCTTAGTAA-GTGTTTAGTTAAAAAAAATACATTTTTATTTGAGACTGGGATTTCCAGTGGCAATGCTGGTAGAGGCATAGCTTGTGAAGCAAAATTTCTGGACCGGACTAGCCCTCTGCATGTTATTAGAGAGTACAAAATTATCCTCCCCT-GGCACATTTGCAAGAGGCAGCTCTTAGAAAGTAAACTCTCTCTACAGGCTATTGATATGAAGCACACTGATCTCATGCAAAGAACTGTGCAGCTGGTGCCATGGGA-GAAGACCGTCAGATCCTTTCTAATGGAAAAATGAAGTCAGACCAAGCTTGCCTCCTTTCTTT-ACAAAATGTAATTATGTAAATGACAAAGCTCTATTATAGACAATGTTTATAATTAGCA-CTATTTTCCCTTTAATTTTAAATAAAGCATGTTAGTTGTGAGTGCCATGCCAACATATTTTCTACAGATGCTATAAACAATGCACAATCAGAAATCCATTTGGGTTGTTTTTGTGGTTATTATTTCAAATTGTGAAAACTCATAATAAATATCAATGTAATGAATAAACACCATTATATGTTGATAAACATCATACTCTTTCAATTTCAGACAA--AACCAATGAATATTAA chr4 + 94230402 73256729 73256728 73257377 73256729 73256728 73257377 649 TATGCATATTTAATAAGTAAGTATTTTTTGGAGAATCCTTATGGGAAACATACTGACTTAAAAAG----TTCTTTAATTTGAAACTATCATTTCTGATA-CAAGGCTGCTCTGTAAGCACCATGTGAAGTAAAGCTTCAGAACAGGGCTAGCTTTCTGCATATGATTAGAGAGACCAAAATTATCTTTCCCTTGGCACATCTGCAAGAGACAGCACTTAAAAAATAAACTCTCTCTGCAGGCTATTGAAATTAAGCACAGTGATCTCATACAAAGCACAGTGCAGCTGGTACCATGGGATGAAGACAGTTGAATCTTTTCTAATGGAAAAATGAAGTCAGACCAAGCTTGCCTCCTTTCTTTCACAAAATATAATTATGTAAACTACAAAGCTCCATTATAGACAATGTTTATAATTAGCAACTGTTTTTCCCTTAATTTTAAGTAGAGCCTGTTAATGGTTGATGTCAAGCCAACACATTTCCTACAGATGCCACAAACAATGAACAATCAAAAATCTGTTGCTGTTGTTTCTTTTGTAATTATTTCAAATTGTGGAAACCTGTAATAAAAATCAACGTAATGAACAAACACCATTGCATGTTGATAAACATAATAGTCTTTCAATTTCAGGAAAGCAACTATGGCATATTAA ...x:...:...x.x...---------.....:...x...x.x:.x..-:.::.x.x.......:----:x:...x......:...:xx.....:::.:-...x....x.xx:x:x::.x.x.......:...::...x.:..x..:.....::.......:.x.........xx..........:.:....-.......:........:....x....:...:............:...........x..x.......x.........:.....x..x...........:........-......x..:::...:..............................................-.......:............:x.........:..........................-..:....:..:..........:..:...x.....:.x..x::..:..x.......:....:..........:.:........x.......:.....::..xxx.......:.x.x..x................:....:::.......x.....:........:..........::..............x...x..............:x..--...:.xx.x....... 18M9I21M1I16M4D30M1D92M1I106M1I62M1I58M1I214M2I16M 510/633 80.6% 649/94230402 0.0% 21/633 3.3% -39819357 -54411045 +3139 chr4 + 190214555 33439337 33439336 33439391 55 TTTTCTTTTTTTTTCTTTTTTTTTTTTTTTGACGGAGTCTCGTTCTGTTCCCTAG chr4 + 94230402 43275303 43275302 43275357 43275303 43275302 43275357 55 TCTTCTTTTTTTTTCTTTTTTTCTTTTTCTGTCAGGATAATATTCTCTTCTCTAG .:....................:.....:..x.:.::.xx::....x...:.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -9835966 -84394436 +3309 chr4 + 190214555 33440970 33440969 33441013 44 AGGGAAAACAGAAAAAAAAAAACAACAACAACAACAACAAAAAC chr4 + 94230402 27313595 27313594 27313638 27313595 27313594 27313638 44 AGGAAAAACAAAAAACAGAAAACAACAACAACAACAAAAAAAAC ...:......:....x.:...................x...... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 6127375 NA +3095 chr4 + 190214555 33440978 33440977 33441021 44 CAGAAAAAAAAAAACAACAACAACAACAACAAAAACAAACAAAA chr4 + 94230402 61993794 61993793 61993837 61993794 61993793 61993837 44 CAGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAA ......:.......x:..:.............x......x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -28552816 -65677586 +3364 chr4 + 190214555 33440980 33440979 33441030 51 GAAAAAAAAAAACAACAACAACAACAACAAAAACAAACAAAAAAAACTTGT chr4 + 94230402 66613563 66613562 66613613 66613563 66613562 66613613 51 GAAAAAAAGCAGCAGCAACAAAAACGACAAAAACAAACAAGAAAGAGTTGT ........:x.:..:......x...:..............:...:.x.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -33172583 -61057819 +3397 chr4 + 190214555 33455384 33455383 33455456 73 ATGCATGGTGGCAGGCACCTGTAGTCCCAGCTATTTGGGAGGCTGAGACACAAGAATTACTTGAACCGGGAGG chr4 + 94230402 76033194 76033193 76033264 76033194 76033193 76033264 71 ATACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:..::....:--....x......:.......:...::........x.x::x...x:.........x:..:. 12M2D59M 52/71 73.2% 71/94230402 0.0% 2/71 2.8% -42577810 -51652592 +3096 chr4 + 190214555 33471939 33471938 33472008 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -42561258 -51669144 +3093 chr4 + 190214555 33476744 33476743 33476863 120 TTCTTCCTACCTTTCTTGCTTCC---TTTCTTCTTCTCTCCTTCCTTCCTTTCCTTCTCTCCTTTCTTTCTATTTCCATTTCCTTTTGCAAGATCTTGTCCTCATCTGCCACTGCAGTATTTC chr4 + 94230402 73695042 73695041 73695161 73695042 73695041 73695161 120 TTCACTCTATGTTCTTTTCATCCACATTTCAACGTCTTTCCATTCTTCTGTT---TCTCACTTCTTTCTCTGTTTACATTTCCTCTTGTGACAACTTGTTTCTCTCAGTGGCTCCATTCCTTC ...x::...:x..::..x.x...---....xx.x...:...x.:....:x..---....x.:.:.:.:...:...x........:...::.x.x.....::::x..x.:x:..x..x.x:... 23M3I26M3D68M 75/117 64.1% 120/94230402 0.0% 6/117 5.1% -40218298 -54012104 +8030 chr4 + 190214555 33481243 33481242 33481437 195 TTCATTAAGAATACCAATTAGACGACAGTTCTTTATTTTAAATCAAGTTATGCAAATGTGGCCTACAC-ATGCAGGTTTATTAATAAACAATATGTGTTTCATTTTCAGTTGCATTAATATTTCACACCTAAA-ATTGCAGTTATAGCAAGTTTACTAAAAAGACTTTCTAGCTAGAATTTAAATGAAAGAACAAAG chr4 + 94230402 73263890 73263889 73264082 73263890 73263889 73264082 193 TTTATTAAGAATATTGATCTTGTGACCATTTCTTAGTTCAAATCATATTATGTTAATTTTGCCTACACTTTTTTGGTTTATTAATAAAC---ATGTATTTTATTTTCAGTTACAATAGTATTTTACACTCAAAGAGTGCATATGCAGAAAGTTTACAGCAGAATCTTTTTGG-TGGAATTTAAATGAATGAGCAAAG ..:..........:::..:xx::...x:..::...x..:......x:.....:x...x.x........-x.x:x...............---....:...:..........:..x..:.....:....::...-.x....xx.::..x........x:x.:.:x....:.:.-.:.............x..:..... 68M1I20M3D41M1I38M1D24M 141/191 73.8% 193/94230402 0.0% 6/191 3.1% -39782647 -54447755 +3356 chr4 + 190214555 33483392 33483391 33483465 74 GTGCACCTGTAGTCCCAGCTGCTGGGGAGGCTGAGGCAGGAGAATTTCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:......:..x.::........x.xx.x...x:x........::.:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -42549812 -51680590 +3141 chr4 + 190214555 33498402 33498401 33498468 67 TATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATATATATATAAACAGTTAT chr4 + 94230402 85834533 85834532 85834599 85834533 85834532 85834599 67 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ...x:..x.....x.................:.xx:...:x.:...x....:..x...x.::x.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -52336131 -41894271 +3022 chr4 + 190214555 33498406 33498405 33498470 65 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATATATATATAAACAGTTATTT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x::.x.....x.................:.xx:....x:x...:....:....:.xx.:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -52336127 -41894275 +3466 chr4 + 190214555 33517579 33517578 33517644 66 GTGGTGCATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGAAGAATTGCTTGAATCCAGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:..--...:.:...........::........x.xx:x...x::......:....... 11M2D53M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -42515622 -51714780 +3059 chr4 + 190214555 33575597 33575596 33575639 43 GTTTTACTTTTTGTTTTGTTTGTTTGTGTGTGTGTGTGTGTGT chr4 + 94230402 86765866 86765865 86765908 86765866 86765865 86765908 43 GTTTTGCTTTTTGTTTTGTTTCGTTTTGTGTGTGTGTGTTTGT .....:...............xx..x.............x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -53190269 -41040133 +3054 chr4 + 190214555 33619102 33619101 33619147 46 AAAAAAAGAAAAAAACAAACAACAACAACAAAAAAAACAAGGCAAC chr4 + 94230402 4563811 4563810 4563856 4563811 4563810 4563856 46 AAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAAC .......:.....x.......:.........x.....x..:x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 29055291 NA +3764 chr4 + 190214555 33637545 33637544 33637650 106 AAATATAATA----TCAATTGAAATAACTGCATCATATTGCATTTTTTCAAATTGCTTTAA-TGTTTTGCTTAATTGAAAAC----ATGTAGATTTTCATATATACTTTCACATT chr4 + 94230402 57448132 57448131 57448245 57448132 57448131 57448245 114 AAGTATAATGAGTGTCAATTGAAGAAATTTCATCTTGAAGCATTTTTTTAAATTGCTTTAATTATTTTAAGTAACTAAAAACCAGAATACAGATTTCCCTA-AGAATGTCATATT ..:......:----.........:x..:.x....x.:xx.........:............-.:....:xx...:.:.....----..::......:.x..-.x.x.x...:... 10M4I47M1I20M4I15M1D13M 80/105 76.2% 114/94230402 0.0% 10/105 9.5% -23810587 -70419815 +3084 chr4 + 190214555 33659532 33659531 33659587 56 AAAAATACAAAAAAAAAAAAAAAATATATATATATATATATATATACACACATACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.x.x.......x.:...............:.:..:...:...:.x.:..:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 32164532 NA +3238 chr4 + 190214555 33659532 33659531 33659589 58 AAAAATACAAAAAAAAAAAAAAAATATATATATATATATATATATACACACATACATA chr4 + 94230402 51472490 51472489 51472547 51472490 51472489 51472547 58 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATA ...x.:.....::......:x.......:.......x.:.:.....:..x:.:..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -17812958 -76417444 +3628 chr4 + 190214555 33691603 33691602 33691697 95 TATACATATATGTGTGTGTGTGTGTGTGTGTA------TGTGTATATATGTGTATATTTATATATATGTGTATATATATATGTTGCATGTTAACTTTCCTT chr4 + 94230402 85834533 85834532 85834633 85834533 85834532 85834633 101 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTT ...x...x.:...x..................------.:x.:...:..:....x..x:..:.x....:::.:...:.:.::.x..x..xx:.x...:... 32M6I63M 66/95 69.5% 101/94230402 0.0% 6/95 6.3% -52142930 -42087472 +3029 chr4 + 190214555 33691609 33691608 33691675 67 TATATGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTGTATATTTATATATATGTGTATATATAT chr4 + 94230402 70094144 70094143 70094210 70094144 70094143 70094210 67 TAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..x..:.......x...x...x.......:...:...:.:x.:.x..x:...x..:.:...::.:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -36402535 -57827867 +3128 chr4 + 190214555 33703491 33703490 33703530 40 CTCTCTGTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..x................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -41544558 -52685844 +3342 chr4 + 190214555 33703493 33703492 33703532 40 CTCTGTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::x................................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -41544556 -52685846 +3179 chr4 + 190214555 33703495 33703494 33703533 39 CTGTCTCTCTCTCTCTCTCTCACACACACACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..x:.................x................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -41544554 -52685848 +3216 chr4 + 190214555 33703498 33703497 33703532 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ........................:.......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 21102193 NA +3011 chr4 + 190214555 33703499 33703498 33703533 35 CTCTCTCTCTCTCTCTCACACACACACACACACAC chr4 + 94230402 12601304 12601303 12601338 12601304 12601303 12601338 35 CTCTCTCTCTCTCTCTCTCACACACGCACACACAC .................x.......:......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 21102195 NA +3008 chr4 + 190214555 33714546 33714545 33714602 57 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAAAGAAAAGAAGAAAAGACA chr4 + 94230402 38128979 38128978 38129035 38128979 38128978 38129035 57 AGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCA .:....::x..x.....x.:...:.:....x..............x...:..x.:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -4414433 -89815969 +3483 chr4 + 190214555 33718554 33718553 33718625 72 GTGCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCACTTGGACCCAGAAGGTAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........x.::........x.xx.x...x......:.........x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -42314652 -51915750 +3431 chr4 + 190214555 33718776 33718775 33718885 110 AGGAAGGAAGGAAGAAAGAAAGAAAGAAAAGAAAGAGAAGAGAGAGAAAGAAGAAAGAGAGAAAAAAAAGAAAGAAAGAAGGAAAGAAATAAAGAAAAGAAAAGAAAATA chr4 + 94230402 24042744 24042743 24042853 24042744 24042743 24042853 110 AGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAAGCA ..x.:.::x.:....:x:....x.:x........:.:::x...:.:x...:.:.......x...x.:..:xx.x.x.:.x:x.x.....:...x...:....:x...::. 110M 68/110 61.8% 110/94230402 0.0% 0/110 0.0% 9676032 NA +3134 chr4 + 190214555 33718786 33718785 33718846 61 GAAGAAAGAAAGAAAGAAAAGAAAGAGAAGAGAGAGAAAGAAGAAAGAGAGAAAAAAAAGA chr4 + 94230402 54037032 54037031 54037092 54037032 54037031 54037092 61 GGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGA .:.:.......:...:....:....x....:xx...:.:x..:.:.x.....:.:...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -20318246 -73912156 +3353 chr4 + 190214555 33750210 33750209 33750280 71 CTGCACTCCAGCCTGGGAGACAGAGTGAGACTCCAT----CAAAAAAACAAAACAAAACAAAAAAAAAAACTGTG chr4 + 94230402 69548344 69548343 69548418 69548344 69548343 69548418 75 CTGTTTTTTAGCATGGAAACCACAGAAGGATTATATATATTAAAAAAACAAAACAAAACAGAAAAAAAAACTGTG ...:x:.::...x...:.:x..x..x::..:.x:..----:...................:.............. 36M4I35M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% -35798134 -58432268 +3003 chr4 + 190214555 33755696 33755695 33755742 47 CTTTTTTTTTTTTTTTTTTTTTTAAATCAACAGACATTCAGTATCCT chr4 + 94230402 31483863 31483862 31483909 31483863 31483862 31483909 47 CCTTTTTTCTTTTTTTTTTTTTTAAATACACTGACATTTAGCATGCT .:......:..................xx..x......:..:..x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 2271833 NA +3679 chr4 + 190214555 33759996 33759995 33760178 183 GTTCTGTCATTGCTGAGAAAGCTCTGTTGAAATTTCAAGCTATGGATTTACCTATATAACTTTTTGGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT-------CTTTCTTTCTCTTTTCTTTCT chr4 + 94230402 6297068 6297067 6297254 6297068 6297067 6297254 187 GCTTTCCTATGACAGATAAAACTCTATTATATATTCTGTATCCAAACTTCTTCCTATA---TTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCT .:.:.x::..x:.x..x...:....:..:x.xx...x:xx.x:::.:..x:::x....---..:..:........x:...x.x.x....:.x..::..xx:::x.:.:.::x:x.....x.:.......x:.x....:..x.....:.::x.x.xx...:..-------....:...:.:....x..x.. 58M3D101M7I21M 107/180 59.4% 187/94230402 0.0% 10/180 5.6% 27462928 NA +3071 chr4 + 190214555 33760037 33760036 33760188 152 ATGGATTTACCTATATAACTTTTTGGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTCTTTTCTTTCTTTTTTTCTTC chr4 + 94230402 53543238 53543237 53543383 53543238 53543237 53543383 146 ATTGATTTCCCCA---AGCTCCCTG---TGCTTATTTACATTCTTGCTTTTTCTCTACTCTGATTTTCTCCATTGGTCCTGTGTGTTTCCTTTTATTCTGTGGGTTGTTTTTTTTAATTTCCATTCAGTCTATTTTCAGTCTATTTTTCTTC ..x.....x..:.---.:..:::..---.x...x:..x.x.....x....:.:...x:::.xx...::.:.x..xx.:..x.x.x.:.:....:x....x.xxx.:x..:...:.xx::.:.x...xx...x.....xx...x......... 13M3D9M3D124M 91/146 62.3% 146/94230402 0.0% 6/146 4.1% -19783201 -74447201 +3459 chr4 + 190214555 33760055 33760054 33760151 97 CTTTTTGGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTT-----TCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697130 63697129 63697239 63697130 63697129 63697239 110 CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT ....::...x..:.:.....:....:.:x..::.:.x....xx.....---------....x:..:..-----.......:..::..:.-..........:....:.x.:. 48M9I11M5I16M1D21M 70/96 72.9% 110/94230402 0.0% 15/96 15.6% -29937075 -64293327 +3237 chr4 + 190214555 33760069 33760068 33760163 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx.:::..........:.:.:x:.:xx:...x.::..x:x.:.....x.....::..:..:...... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -49566865 -44663537 +3237 chr4 + 190214555 33760073 33760072 33760167 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx.:::..........:.:.:x:.:xx:...x.::..x:x.:.....x.....:...::.:...... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -49566861 -44663541 +3050 chr4 + 190214555 33760112 33760111 33760184 73 TTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTCTTTTCTTTCTTTTTTT chr4 + 94230402 72471342 72471341 72471414 72471342 72471341 72471414 73 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTT ..x:...:.:....x:xxx...::....xxx......x:..x:....:.:....:..........:....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -38711230 -55519172 +3097 chr4 + 190214555 33767302 33767301 33767381 80 AAAAAGAGCTATATAAAGAAATAGTTTAATTCATATGAAGTCCAAAAATAGGCAGATTCAGAGCAAAAAAAAAAAAAAAA chr4 + 94230402 64055804 64055803 64055878 64055804 64055803 64055878 75 AAAAAGAAAGAT-----GAAAAAGTTTTATTCAGAACAAACACAAAAATAGAGAATCACAGAGAAAAAAAAAAAAAAAAA .......:xx..-----....x.....x.....x.xx..::x.........:x.:x:x.....x................ 12M5D63M 57/75 76.0% 75/94230402 0.0% 5/75 6.7% -30288502 -63941900 +13578 chr4 + 190214555 33789531 33789530 33789993 463 ATTAGTTATCCAGCCAAAAAT-TATATAGAATTGTAGCTGAACACACTTATTTTGAAAAGAGTTCCGGAATGATGAATCTTAATAATATCAATCAGCATGCATTTTAAAAATACAAATCCAACTGCAAGTAAAAATCGTAACTTTTTTTAAAAA----------------CTGGAACTATCTCAATAGATACAAATTTGTTCATGAAAATTTAAACAGGATATTGTTTCAATGGAAAACTG---ATTTCCAAAGAAGCAGTAATAA---GTATTCTCATAAAATTATGAACAGCTAGCATCATCCCTACTATAACCTTTCCAGAATATGAATATGTTGATTAATTGCATGAGACACCACACTTGAATTAGCCTTCTAAGCACAAAGATCTAT-ACTTATGGTCAATCTAGCGCTAC--AGTCCAGCATGCCAAGTTTGGAATTTTA---TTTTATATGAACTTTTCTCTTTCACTCTTGTGAATGTTTCATT chr4 + 94230402 73207177 73207176 73207659 73207177 73207176 73207659 483 ATTTGTTATTTGGCTAAAATTATATATTGTAGTATAAATGAAAAC---CATTTTTAAACATTTTCTAGACTGCTGAATATTTACAGCATCAATCAACATGCATTTCAGACATGCAAATTCAAATGCAAAAAAAGA-----AATTATATGAAAAATAAAACAGAAGTACTGCTGGAATATTTTCAATAGATTCTAAATTGTTCATCAACGTTAAAAATGTTTTTTGTTTCAAAATGAAACAGTTCATTTCCCAGGAAAAAGTAGTAGCTTTTTTTTTCAGAAATCAATGTTCAGCCAACATTATGCCTTTTATAACCTTTCCGAAATATGAATATGCTGATTAATT-CACAAGACATAGATCTTGAACTACCCTTCTAAACATCAAGAGCTTTCATTGAAGGCCAATTCATTGCAGCTTATTCCAAAGAGACAAGATTTGACTTTCAGATTTTCATATGGTCTTTTAGTTTTTATTGATGCTTATGCTGTATT ...x.....:::..:....x.-.....x.x.x.:..:x....x..---:.....x...x:xx...::..x..x.....x..x.:.::........:.........:.:.x..:.....:...x.....:x...:.-----.x..x.x.x.....----------------......:xx.:.........x.x..x........x..x:..x...xx.xx.x.........x:x:....x.---......x.:...:x....:..:---x.x..:...x...x:x...xx....:.:...:..x...x:............::............:.........-..::.....:x:xx......:..x........:..:x....x..x.-.:.x.x..:....::.x:..x:.--.x....:x:x.x....x..x..x...:.---...:.....:x.....xx:...:.:.xx..:xx...:.x:... 21M1I23M3D87M5D14M16I71M3I22M3I76M1D46M1I23M2I28M3I43M 317/454 69.8% 483/94230402 0.0% 38/454 8.4% -39417646 -54812756 +3308 chr4 + 190214555 33797348 33797347 33797425 78 ATATATACACACATATTTATACACATATATACACACATATATTCACACACACACATGTATGCACATTTATTCTATTCT chr4 + 94230402 58675381 58675380 58675454 58675381 58675380 58675454 74 ATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATAT----ATTTAGCCTATACT ..x.x......:x.x.x...:..:..........x.....:.x.........x..x:...----.....x:....x.. 60M4D14M 57/74 77.0% 74/94230402 0.0% 4/74 5.4% -24878033 -69352369 +3038 chr4 + 190214555 33814857 33814856 33814919 63 CAATGGCTTGTAAGTTTTTCTTTTTCTTTTTCTTTTCTTCTTTTTTTTTTTTTTCGAGAAGGA chr4 + 94230402 53687650 53687649 53687712 53687650 53687649 53687712 63 CAAGGACTAATGAGTTTTTATTTCTCTTTTTCTTTTACTTTGTTTCTTTTCAATGGAGAAAGA ...x.:..x:.:.......x...:............x:.:.x...:....:xx.x.....:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -19872793 -74357609 +3072 chr4 + 190214555 33838533 33838532 33838616 84 TAGAAGCTT------AATATTAAAAAGATGATTTTCACACAAACATAGGATAAACATATTTTAAGATTATATACAACTCATCAATGAGAG chr4 + 94230402 72880032 72880031 72880121 72880032 72880031 72880121 90 TAGAATCTTCAAGGGAGCATTAAGAAAAAGACTTCTAAACAAATGTAAGATAATAGTAATTTAAAATTAGAGAAAACTCCACAAGGAAAG .....x...------.::.....:..:.x..:..::.x.....::..:.....xx:..x.....:....x.x.x.....xx...x..:.. 9M6I75M 59/84 70.2% 90/94230402 0.0% 6/84 7.1% -39041499 -55188903 +3238 chr4 + 190214555 33851356 33851355 33851448 93 TGGGCAA-CAAGAGCAAAAACTTCGTAAAAAAAAAAATGTATATGTATGTGTGTGTGTGTATATGTATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548400 85548399 85548490 85548400 85548399 85548490 91 TGGACAATCAAAAGCT----CTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ...:...-...:...x----....:x...........x:xx...:.:.:........::..:..:.......x.....-.x.:..:x....x:.. 7M1I8M4D58M1I16M 66/89 74.2% 91/94230402 0.0% 6/89 6.7% -51697044 -42533358 +3637 chr4 + 190214555 33851369 33851368 33851450 82 CAAAAACTTCGTAAAAAAAAAAATGTATATGTATGTGTGTGTGTGTATATGTATATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548408 85548407 85548490 85548408 85548407 85548490 83 CAAAAGCTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .....:..::x:...........x:x.xx.:.....:........:...::.........x.....-.x.:..:x....x:.. 66M1I16M 60/82 73.2% 83/94230402 0.0% 1/82 1.2% -51697039 -42533363 +3679 chr4 + 190214555 33851374 33851373 33851470 97 ACTTCGTAAAAAAAAAAATGTATATGTATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATATATATATGAGGTT chr4 + 94230402 37597413 37597412 37597505 37597413 37597412 37597505 93 ACTTCGTAACAAAGAGAATGTATGTGTAAGCTAGAATGCCTATGTATATAAATAAATATATATG-ACATGCCTATATATATA---AAACATGAAATT .........x...:.:.......:....x.:xx.x:..:x...:.:....x...x........:-.:..::x..........---.x.:....::.. 64M1D17M3D12M 68/93 73.1% 93/94230402 0.0% 4/93 4.3% -3746039 -90484363 +3402 chr4 + 190214555 33851378 33851377 33851480 103 CGTAAAAAAAAAAATGTATATGTATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATATATATATGAGGTTCATTCTTCTT chr4 + 94230402 25672297 25672296 25672386 25672297 25672296 25672386 90 CATAAAGAGAAAAATG--------TGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATG-----CATTCTTCTT .:....:.:.......--------...:....x.....x..x..:xx....::.:.....:.:::....::..::x.:.:.::.....-----.......... 16M8D64M5D10M 64/90 71.1% 90/94230402 0.0% 13/90 14.4% 8179081 NA +3284 chr4 + 190214555 33851381 33851380 33851446 66 AAAAAAAAAAATGTATATGTATGTGTGTGTGTGTATATGTATATATATAT-ATATATATATATATAT chr4 + 94230402 85548424 85548423 85548490 85548424 85548423 85548490 67 AAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .........:.xx................::.::....:.....x.....-.x.:..:x....x:.. 50M1I16M 51/66 77.3% 67/94230402 0.0% 1/66 1.5% -51697043 -42533359 +3351 chr4 + 190214555 33851389 33851388 33851462 74 AAATGTATATGTATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094137 70094136 70094210 70094137 70094136 70094210 74 AAGGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..:x..:..x:.........x...x.:.x.....:.....:......x.:.xx.x:...x........::.:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -36242748 -57987654 +3195 chr4 + 190214555 33851391 33851390 33851457 67 ATGTATATGTATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..::..:....::.....:..x.:.:....x:..:...:.x......:......:xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -12211908 -82018494 +3696 chr4 + 190214555 33851392 33851391 33851465 74 TGTATATGTATGTGTGTGTGTGTAT--ATGTATATATATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...:.x...:...............--.....x::...:....:..x...:..:.x...::.:.:...:.:.:... 25M2I49M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% -51983149 -42247253 +3064 chr4 + 190214555 33851397 33851396 33851463 67 ATGTATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..::......:::.......:x.:.:..:.x:..:...:.x......:......:xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -12211902 -82018500 +3179 chr4 + 190214555 33851400 33851399 33851472 73 TATGTGTGTGTGTGTATATGTATATATATATATATATATATATATATATATATATATATATATATGAGGTTCA chr4 + 94230402 46063300 46063299 46063372 46063300 46063299 46063372 73 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCA ..::.....:::...:....x::.:..:.x:..:...:.x......:......:xxx.......::....x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -12211900 -82018502 +3402 chr4 + 190214555 33861596 33861595 33861679 84 TGTGTTAGTCTGTTCGTGCTGATATATATATATATATATATATATATATATATATA----CACACATATATATATACACATATATATA chr4 + 94230402 91331288 91331287 91331375 91331288 91331287 91331375 88 TGAGTTTGTCTGAGAGTACTGCTATATACATATATATGATTACATACATATACACAAAATCATGCATTTGAATATATACATGcataca ..x...x.....xxx..:...x......:........:xx..:...:.....:.:.----..::...x.:x.....:....::...:. 56M4I28M 60/84 71.4% 88/94230402 0.0% 4/84 4.8% -57469692 -36760710 +3027 chr4 + 190214555 33861649 33861648 33861694 46 ATACACACATATATATATACACATATATATATAAATACACATATAT chr4 + 94230402 54593564 54593563 54593609 54593564 54593563 54593609 46 ATGCACAAATATATACTTACACATTTATATATAGATACAAATATAT ..:....x.......:x.......x........:.....x...... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -20731915 -73498487 +3003 chr4 + 190214555 33898489 33898488 33898537 49 ACAGACAGACAGACACACACACACACACACACACACACACACACAAAAC chr4 + 94230402 60987252 60987251 60987300 60987252 60987251 60987300 49 ACAGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGC .....:.....:.:...:.:......x........::.x....x...:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -27088763 -67141639 +3088 chr4 + 190214555 33937460 33937459 33937513 54 CCAGAAAAGCAAAAACAAACAAACAAACAAACAAACAAAAATCAAATCAAGACA chr4 + 94230402 68352012 68352011 68352065 68352012 68352011 68352065 54 CCAGAAAGGCAAAACCAAACAAACAAACAAATACACCAAAGGGAGAACAAGCCA .......:......x................:.x..x...:xx.:.x....x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -34414552 -59815850 +3007 chr4 + 190214555 33937480 33937479 33937538 59 AAACAAACAAACAAACAAAAATCAAATCAAGACAGAATGAAGAAAAAAATGCCAAGAAT chr4 + 94230402 71156601 71156600 71156659 71156601 71156600 71156659 59 AAAAAAACAAACAAACAAAACACAAAACAAAACAGAAAAAAGAACAGTTTTCCCAGAAT ...x................xx....x...:......x:.....x.:xx.x..x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -37219121 -57011281 +3194 chr4 + 190214555 33946875 33946874 33946958 84 TCTATCTTCTTTATTTAAAAATATATGTTTTTTTTCAACAAAATGAGAAGGAAACCCACAGACTTGAAGAAAATATTTGCAAAA chr4 + 94230402 43712626 43712625 43712702 43712626 43712625 43712702 77 TCAACTTTCTTTATTTAATAATACATGTGCTTTTTCAAAAAATTGAAAAACAAATTGGTAGACT-------GATGTCTGAAAAA ..x.::............x....:....x:........x...x...:..:x...::x::.....-------:..:.:..x.... 64M7D13M 56/77 72.7% 77/94230402 0.0% 7/77 9.1% -9765751 -84464651 +3078 chr4 + 190214555 33962579 33962578 33962653 75 TCCTAATCTTTTCTTTTCTTCTTCCTTCCTTCCTTTCCTTCTTTTTTTTTT--TTTTTTTTTTTCCTGAGACCGAGT chr4 + 94230402 80507621 80507620 80507697 80507621 80507620 80507697 77 TCTGAGTTATTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTTCCCCCAAACTGAAT ..:x.:.:x...xx.....x......:::.x.:x......:..........--.:........:..:x.:..:..:. 51M2I24M 53/75 70.7% 77/94230402 0.0% 2/75 2.7% -46545042 -47685360 +4278 chr4 + 190214555 33964037 33964036 33964119 83 CATAGTGGTGTACATCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGTGAATTGCTTGAACCCGGGAGGTGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.......:..:.--...:.:............:........x.xx.....x::.........:.:..x.xx:..:..... 15M2D66M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% -42069160 -52161242 +3148 chr4 + 190214555 34026749 34026748 34026815 67 CTGTTGCCCATTGACATTACTTTGTGAGAATTATTTCTTTATTTTATGCTAAAAAGTCACTAAGTAG chr4 + 94230402 6654747 6654746 6654813 6654747 6654746 6654813 67 CTGCTGCTCAGTCAGGTTCATGTATGAGGATTATTTTTTTTTTTTAAGCTAAAAAGCCTCTAGGGAG ...:...:..x.x.x:..xx.x.:....:.......:...x.....x.........:.x...:.x.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 27372002 NA +3030 chr4 + 190214555 34049165 34049164 34049222 58 CACACACACACACACACATACACACACACACACACACACACAGACAGAGAAAGAGAAA chr4 + 94230402 32335923 32335922 32335980 32335923 32335922 32335980 58 CACGCTTACAGACTCTCTTTCACACACCCACACGCACACAAAGACAAAGAAAAAAAAA ...:.x:...x..x.x.x.x.......x.....:......x.....:.....:.:... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 1713242 NA +3646 chr4 + 190214555 34062071 34062070 34062144 74 GTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAAACAGGAGAATCACTTGAACCTGGGAAGTGGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:...........::.......:x.xx.x...x..........::.:.:x.xx:..:..... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -41971133 -52259269 +3069 chr4 + 190214555 34073029 34073028 34073070 42 TCTGTCTCAAAAAAAAAAAAAAAAACAAACAAACAAACAAAA chr4 + 94230402 75561887 75561886 75561928 75561887 75561886 75561928 42 TCTCTGTTAAAAAAAAGAAAGAAAACAAACAAACAAACAAAA ...x.x.:........:...:..................... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -41488858 -52741544 +3190 chr4 + 190214555 34073033 34073032 34073076 44 TCTCAAAAAAAAAAAAAAAAACA----AACAAACAAACAAAAGAATGG chr4 + 94230402 37420841 37420840 37420888 37420841 37420840 37420888 48 TCTCAAAAGAAAAAAAAAAAACAAATGAACAAACAAATAAAGGAATGG ........:..............----..........:...:...... 23M4I21M 41/44 93.2% 48/94230402 0.0% 4/44 9.1% -3347808 -90882594 +3486 chr4 + 190214555 34110655 34110654 34110716 62 TGGTGCACACTTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGGACCCGG chr4 + 94230402 76033202 76033201 76033261 76033202 76033201 76033261 60 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ........:--......:...........::........x.xx.x...x......:....:. 9M2D51M 49/60 81.7% 60/94230402 0.0% 2/60 3.3% -41922547 -52307855 +3036 chr4 + 190214555 34112174 34112173 34112229 56 AAACCTATATATTACATTAGGGAAACATATATATATGTATATACATATGTATACAT chr4 + 94230402 28318650 28318649 28318705 28318650 28318649 28318705 56 AAGCTTGTATGTGCCCCAGGTGAAACATATACATACGTATATATATATGTATACAT ..:.:.:...:.xx.x:x:.x..........:...:.......:............ 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 5793524 NA +3422 chr4 + 190214555 34114806 34114805 34114878 73 TGCACCCGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x:...:.:.........::::........x.xx.x...x..:..........:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -41918399 -52312003 +3285 chr4 + 190214555 34134107 34134106 34134201 95 TGTGTGTGTTTGATTTTTATTTTTTATTTATTTTTCTGTTTAAAAATTATTTATTTCTTTTTCTTCCTTTTTTAACTTTTATTTTGGATTTGTGT chr4 + 94230402 12051790 12051789 12051882 12051790 12051789 12051882 93 TGGGTGTTTTTGGTTTTT--TTTCTGTTTTTTTTTTTGGTGAAAAATGGCCTATTTCTCATTTTTGTTCCCTTGAGCTGCCTCTTCTATTTGTGT ..x....x....:.....--...:.:...x.....:..x.x......x:::.......:x..:..x:.:::..:.x:.x:x.:..xx........ 18M2D75M 63/93 67.7% 93/94230402 0.0% 2/93 2.2% 22082317 NA +3567 chr4 + 190214555 34144341 34144340 34144442 102 GATCAAGTTTATATTAA-GAACTTTTCAGATTACCATGTCTTAAACAAAACAAAACAAACAAAAATAAAACCTTTGCAGAGGCCACTCAACTGTCCTTTTTTT chr4 + 94230402 17042968 17042967 17043070 17042968 17042967 17043070 103 GATAAAATTTATGCTAATGAGTTTTTCAGCTAGCTAATTAGCAAAAAAAACAAAACAAACAAACAAAAAAACCCCAAAACGACAACCCAGCTATTCTTTGCTT ...x..:.....::...-..::.......x.x:.:.xx.xx:...x.................x.x....x.::::x.:x.:.x..:..:..:.:....x:.. 17M1I85M 68/102 66.7% 103/94230402 0.0% 1/102 1.0% 17101373 NA +3424 chr4 + 190214555 34167372 34167371 34167447 76 TGGTGCACCTGTAGTGCCAGCTACTTGGGTGGCTGAGGTGGGAGGATCACTTGAGATTAGGAGGTCACGGCTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........x......x...........::x.......x:xx.x.:.x.......:x::..:..x.:xx.....:.. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -41865830 -52364572 +3427 chr4 + 190214555 34209763 34209762 34209825 63 CCATATATATATATATACACATATATATACACACACACACACACACACATATATATATATACA chr4 + 94230402 61270773 61270772 61270835 61270773 61270772 61270835 63 CCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ....:x......x.:..:.:..:.......:...::.....x....x...:....x:..:... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -27061010 -67169392 +3170 chr4 + 190214555 34209783 34209782 34209833 51 ATATATATACACACACACACACACACACATATATATATATACATACGTATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:.....:.::.:........x..x..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -11931073 -82299329 +3385 chr4 + 190214555 34219375 34219374 34219445 71 ACTGGTATATATATATATATATATATATATATATACACACAAACTGGTATATATATATATATATATATATA chr4 + 94230402 91331305 91331304 91331375 91331305 91331304 91331375 71 ACTGCTATATACATATATATGATTACATACATATACACAAAATCATGCATTTGAATATATACATGcataca ....x......:........:xx..:...:.........x..x.xx.:..x.:x.......:..::...:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -57111930 -37118472 +3581 chr4 + 190214555 34219469 34219468 34219559 91 ATATATATATACACGCACACCAATGGTATATATATATATATACACACACACACACACACACACACCAATGGTATATATATATATATATATA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACA-------TTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...:...:....-------.x...:x.:....:........:...........x:x.xx..x.x..:..:x...x......... 19M7D65M 62/84 73.8% 84/94230402 0.0% 7/84 8.3% 10971747 NA +3102 chr4 + 190214555 34219477 34219476 34219524 48 ATACACGCACACCAATGGTATATATATATATATACACACACACACACA chr4 + 94230402 74671060 74671059 74671107 74671060 74671059 74671107 48 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACA ...:..:x.x.::.::x............................... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -40451583 -53778819 +3036 chr4 + 190214555 34219540 34219539 34219579 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 29810458 NA +3165 chr4 + 190214555 34219541 34219540 34219609 69 ATATATATATATATATATACACACACACACACACACACACACCAATGGTGTGTGTATATATATATATAT chr4 + 94230402 23247738 23247737 23247806 23247738 23247737 23247806 69 ACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:..x...:x.:....:........:...........x:x.xx..x.x.:::..x...x.......... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 10971803 NA +3224 chr4 + 190214555 34219631 34219630 34219690 60 TATTTATATATACCATTATATATATACCATTATATATATACATATATACACATATATACA chr4 + 94230402 66642211 66642210 66642270 66642211 66642210 66642270 60 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA ...x::.......:.x...x:...:....x.:........::x....:......:..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -32422580 -61807822 +3003 chr4 + 190214555 34219661 34219660 34219706 46 TATATATATACATATATACACATATATACACACACACACACACACA chr4 + 94230402 23247729 23247728 23247774 23247729 23247728 23247774 46 TATGCACACACATTTATGAACATATGTACACACATACACACACACA ...::.:.:....x...:x......:........:........... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 10971932 NA +3252 chr4 + 190214555 34232666 34232665 34232738 73 TTCTTTCCCTTTCCCTTTTCTTTCTTTTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCT chr4 + 94230402 86518997 86518996 86519069 86518997 86518996 86519069 73 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTTCT ..::......::.:..:..x....xx....:.....:...:...........x::...xx::...xx:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -52286331 -41944071 +3375 chr4 + 190214555 34255536 34255535 34255602 67 CACTGACTGGTATTATTATTTCTTATTTGTTTTTGTTTTTTGTGTGTGTGTTTTCTGGGATGTAAGT chr4 + 94230402 23734017 23734016 23734083 23734017 23734016 23734083 67 CATTGGCTTTTGTTGTTGTTGTTTATTTGTTTTTTTTGTTTGTGTGTGTGTGTTTTGTGTTGTGTGT ..:..:..xx.:..:..:..x:............x..x.............x..:..x.x...:x.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 10521519 NA +3016 chr4 + 190214555 34261047 34261046 34261114 68 AAATGAGTCAATATATGTGTTTTTGTGTTTGTATGTATGTGTATATA------TATGTATATGTGTGTGTATAT chr4 + 94230402 70094137 70094136 70094210 70094137 70094136 70094210 74 AAGGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..:x.x..x.....:.......x.x.............:........------.x::..x..:.:.:..:.:.. 47M6I21M 51/68 75.0% 74/94230402 0.0% 6/68 8.8% -35833090 -58397312 +3145 chr4 + 190214555 34266129 34266128 34266186 58 GAATGAAAGAAAAAGAAAGAAAGAAGGAAAGAAGAAAGGAAGGGAGGGAGGGAGGGAG chr4 + 94230402 26216017 26216016 26216074 26216017 26216016 26216074 58 GAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ...x...............x::.:...::.:..::....x:.......::.:...x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 8050112 NA +3260 chr4 + 190214555 34277155 34277154 34277200 46 GTTTTTTGGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTTGGT chr4 + 94230402 27444618 27444617 27444663 27444618 27444617 27444663 46 GTTGTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGT ...x.....x......x..............xx............. 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 6832537 NA +3067 chr4 + 190214555 34283813 34283812 34283871 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -41749393 -52481009 +3098 chr4 + 190214555 34328460 34328459 34328546 87 AAAACTGACACATTTTAGCCAAACTAAGAAAAAAAGAGGAAAGACTCAAATAAACAAAATCAGAAATGAAAAAGGAGACATTAAGAT chr4 + 94230402 77787060 77787059 77787146 77787060 77787059 77787146 87 AAAGTTCATACAGTTAATCCAAGCTATTTTTGAAAAAGCAAAGACTGAAATAATTAGAATTAGGGGTGGAATGAGAGAAATTAAAAT ...::.x.:...x..x.x....:...xxxxx:...:..x.......x......x:.:...:..:::..:..x::....x.....:.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% -43458600 -50771802 +3098 chr4 + 190214555 34328460 34328459 34328546 87 AAAACTGACACATTTTAGCCAAACTAAGAAAAAAAGAGGAAAGACTCAAATAAACAAAATCAGAAATGAAAAAGGAGACATTAAGAT chr4 + 94230402 77781323 77781322 77781409 77781323 77781322 77781409 87 AAAGTTCATACAGTTAATCCAAGCTATTTTTGAAAAAGCAAAGACTGAAATAATTAGAATTAGGGGTGGAATGAGAGAAATTAAAAT ...::.x.:...x..x.x....:...xxxxx:...:..x.......x......x:.:...:..:::..:..x::....x.....:.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% -43452863 -50777539 +3071 chr4 + 190214555 34336243 34336242 34336291 49 ATATATGTATACACATACATATGTGTATATACACATAGACACACACACA chr4 + 94230402 27759113 27759112 27759161 27759113 27759112 27759161 49 ATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA ....:.:.x....x.:..............:..::..x....:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 6577130 NA +3400 chr4 + 190214555 34342708 34342707 34342767 60 TGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x....:.............::........x.:x.x...x.:........::.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -41690497 -52539905 +3361 chr4 + 190214555 34365250 34365249 34365321 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.x...........:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -41667956 -52562446 +3110 chr4 + 190214555 34385087 34385086 34385149 63 CTATATATATATATATATACACATACACACAGATACATATATAGCTTATATAAGGTATATATG chr4 + 94230402 74671075 74671074 74671137 74671075 74671074 74671137 63 CTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATG ..:....................:.......x.x.x.x.x......x.x.x..:x..x.x... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% -40285988 -53944414 +3086 chr4 + 190214555 34394845 34394844 34394930 86 AGTGTTCATCAACAGATGAATGGAT--------ACACAAAACGTGGTGTATATATGTGTGTATGTATGTGTATGTGTGTATACTTATATATATA chr4 + 94230402 63364576 63364575 63364663 63364576 63364575 63364663 88 AATGGTCATCAATA------TGGATTTTATATAAGACAAAAGAAAAAGTATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTATACATA .:..x.......:.------.....--------.x......x:x::x....:.:::.........:.x:::..............:....:... 14M6D5M8I61M 59/80 73.8% 88/94230402 0.0% 14/80 17.5% -28969731 -65260671 +4546 chr4 + 190214555 34432174 34432173 34432377 204 AGAAAATACCGGATGTAGAGGTCACCATTGTTATTACAAACTATGAAAATAAAAAA---TATTTTAAAATT-CTTTTTGTGTGATGA--AAGGCTAAAAGCTGAAGTATGTGTTGCCATGGAAATAGTGTTTTGTTTACAGCACTTGTCTTTTCT---------AGAACTCATCCATTTAATGGTAGGAGAGAACC----------ACTTCAATCTTGACATTGTATTA chr4 + 94230402 59259540 59259539 59259768 59259540 59259539 59259768 229 AAAAAAGACCAAAAAGAAAGACCAGTTTTGTTACTAGTAACCATAAAAATATGAAAATGTAAACTAAAATAACTGTTTAAATATTTATTGATGTTAGAAGCCAAAGTATGTGTTGTCATTTATACGCTGAACTGTTTACAGTACTTGTCTTTCCTGAGCATCTGAAGACCTCTTGAGAAATCAATGGGAGAAAACCAGAAAACAGGACTTCATTCCCAGCATTCTTTTA .:....x...::.x:x.:..::..x:x......:..xx...:..:......x:...---..xx:......x-..x...:x:.:x.x.--:.x.:..:....::............:...xx.x.::x..xx:.........:..........:..---------.::..::x.:x.xxx.x:::.:.....:....----------......x..::::....x.x... 56M3I12M1I15M2I66M9I32M10I23M 132/204 64.7% 229/94230402 0.0% 25/204 12.3% -24827366 -69403036 +3645 chr4 + 190214555 34458730 34458729 34458830 101 CAGGGTGGTGCATGCCTATAATCGCAGCTACTTGGGAGGCTGAGGCCAGAGAATTGCTTGAACCCAGGAGGCAGAGGTTACAGTGAGCCAACATCATACCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..x:........:.--.:..:.:x..........::........x..x.x...x::...........:..x:xx:..:.::..------.....x..:... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% -41574467 -52655935 +3032 chr4 + 190214555 34504114 34504113 34504163 50 ATAAAATACAAAAATGTGTGTGTGTGTTTGTGTGTGTATATATATAAATA chr4 + 94230402 8684322 8684321 8684371 8684322 8684321 8684371 50 ATAATACATATAGCTCTATGTGTGTATCTGTGTGTGTATATATATAAATA ....x.:.:.x.:x.x.:.......:.:...................... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 25819792 NA +3160 chr4 + 190214555 34504120 34504119 34504189 70 TACAAAAATGTGTGTGTGT--GTTTGTGTGTGTATATATATAAATATATATATATATATATATATATAATTT chr4 + 94230402 70094142 70094141 70094213 70094142 70094141 70094213 72 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACATTCT .::...x........x...--......:...:...:........:.xx.x:...x........::.:.x.:. 19M2I51M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% -35590022 -58640380 +3041 chr4 + 190214555 34530004 34530003 34530049 46 CCTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 44980311 44980310 44980356 44980311 44980310 44980356 46 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAA ....:.........:..:.x::.:..........:.........:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -10450307 -83780095 +3395 chr4 + 190214555 34544510 34544509 34544649 140 TTAATTTAATTGAT-TTGGAGTGTGACTTGGGCATTAATAATTTT----TACAAGCCTCACAAGTAACTATAGTG-TGCCTCAATGGTTGAGATTCATGGACTCAGAGGGTTTTTGTTTGTTTGTTTGTTTTTGTTTTTCCTAATG chr4 + 94230402 22514663 22514662 22514796 22514663 22514662 22514796 134 ttaattaaaatGATACTGAAATGTGCTGTGTGGAGAAATAGTTCTCCAGTAAAGATTATATGGTTAATCATAATGGTGGTTTTGTAGATGAAATT------------GTGGTTTTGTTTGTTTGTTTGTTTTTGTTTTTTCCAATG ......x..x....-:..:.:....x:x..x.x.xx....:..:.----..x.::::x:.:::x...::...:..-..x:.:x:.:.x...:...------------.x.x............................:.:.... 14M1I30M4I26M1I19M12D39M 88/128 68.8% 134/94230402 0.0% 18/128 14.1% 12029847 NA +8921 chr4 + 190214555 34552297 34552296 34552554 258 TTCTAATAATGAAACTGATAATTATACTTCTTTCATAGAGCTGTAATTGAATGAATTTAAT----TGCCTCTTCCGTTTAACTTTAATGCTAGGTTTCAAATTGTTGTATGGACAGGAAAGTAACATTAGAAAAATTACTCTACTGTTGCTTTCTTTTCTATACAGTGGTTTGAACTCAAGCAATAAAGTTAAATGAAAAAGGCTCTATACTCAATTTTCAATTATAGTAAAGGCAGGGAGCCACAATTATCCCTTTCATTA chr4 + 94230402 73012136 73012135 73012392 73012136 73012135 73012392 257 TTTCAGTAATGAAAGGGATAATTGTGGCTCCCTGCCTCTGCTGTAATTGAA--AATCTAGTATAGTGCCTTTTCCATTTAACTTTATTGCTTGAGTTCAAATCATTGTAGAGGAGGGGAAGCAACAGTAGAATAATGTCTCTAATGTTGCTTTCCTGTCCATTCACCAGTTTGAAACCTAGCATTAATGTTAAAAGGAGGAGCAATTGGAT---ATATTCTATTATTGAATAGGAAAAGAACTGTAATTATAAATTTCAGTA ..::.:........xx.......:.:x:..::.xx:xxx............--...:..:.----.....:....:..........x....x.:x.......::.....x:.:x:..:...:....x.....x...xx.....x..........:.x..:..x..x::.......x:.x....x...x......x.:.::..xxx:.:x.:---..x...x.....x.x.x...x.::..:.:::......xxx.....x.. 51M2D8M4I146M3D48M 175/253 69.2% 257/94230402 0.0% 9/253 3.6% -38459839 -55770563 +3019 chr4 + 190214555 34601428 34601427 34601497 70 TCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAATATTTGCATTTATGGAAGTATTTAAGGT chr4 + 94230402 48450679 48450678 48450748 48450679 48450678 48450748 70 TCCTTTTCTTAGGAAAAAGAAAGAAGAAGAAAAAAAAAAAGACATTCAAATTGATGACAGTCTCTGAAAT ...x.:..xx.::.....:...:..:............:.:.:...::x...x...:x...x.:.:.::. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -13849251 -80381151 +3388 chr4 + 190214555 34645572 34645571 34645743 172 TATATATATACACCATATATATATGTGTATATATGTATATATGTGTATATATTTGTGTATATATATACACGTATGTGTATACATATGTATATATATATACACACCATATATAATATGGTGTATATTTA-TGGTGTATATATGGTGTATATATATATATGGTGTGTGTATATAT chr4 + 94230402 56867291 56867290 56867443 56867291 56867290 56867443 153 TATACATAT--------TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA---ATGT---------TGCAATTTTTTCAGAACATGATAAATAATAACTGAGATACAGAGGACTCAGATATATCTATGGTGATTATGTGTGT ....:....--------.:.:.:..x:..:...:::.....:::xx...........:..:........x......::.:.---....---------.:..xx::x.x:.x..:...:.:x...x.x.-..:x:..:.x.x.::x:.x......x.......xx.:.:.:.:. 9M8D64M3D4M9D31M1I44M 98/152 64.5% 153/94230402 0.0% 21/152 13.8% -22221719 -72008683 +3161 chr4 + 190214555 34645591 34645590 34645675 85 TATATGTGTATATATGTATATATGTGTATATATTTGTGTATATATATACACGTATGTGTATACATATGTATATATATATACACAC chr4 + 94230402 85834533 85834532 85834613 85834533 85834532 85834613 81 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATA----CATATGTAAATACATGTTTATGCACACATACACAC ...x::.x.:.:.x...:.:.:.....:.:....x:....x::...----.:.....:x......:.x...::.:.:........ 46M4D35M 55/81 67.9% 81/94230402 0.0% 4/81 4.9% -51188942 -43041460 +3741 chr4 + 190214555 34645720 34645719 34645790 71 TATATATATGGTGTGTGTATATATATACATATGTAT--ACACATATGTATATATATACACAAATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ....:....x.......x...:...:......::.:--.:.:..x...::..:....:....:...:...... 36M2I35M 54/71 76.1% 73/94230402 0.0% 2/71 2.8% -22221571 -72008831 +3341 chr4 + 190214555 34666121 34666120 34666284 164 ACATATAGAATGAATAATATTTATGTGTTAGAATGAATAGTATTTATGTGTTTGGGTTCTCCAGAG-AAACAGAATAAATAGGATATCTGTGTGTGTATATATATATACACACACATATATATGTATATCTGTGTGTA--------TATATATGTATATGTA-----TATATACATAT chr4 + 94230402 54005622 54005621 54005782 54005622 54005621 54005782 161 ACATATAGAC--AACAACATTTA---------------GTTACTTATGTGTGTAATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGT .........x--..:..:.....---------------:x..:........x.::xxxx.x....:-x....:.x..x..x.:.:.:x.:...:.x........:...........:.:.x.x:.x.:..:xxx..:.--------..:.........x...-----.x.......:. 10M2D11M15D28M1I71M8I16M5I11M 103/147 70.1% 161/94230402 0.0% 31/147 21.1% -19339501 -74890901 +3351 chr4 + 190214555 34666222 34666221 34666308 87 TATATACACACACATATATATGTATATCTGTGTGTATATATATGTATATGTATATATACATATATATACACACACACAAGCACACAC chr4 + 94230402 41749096 41749095 41749180 41749096 41749095 41749180 85 TATATAAACACACATATAAGTTTATATCAGTATG--TGCGTATGTATACATACATGTACGCTTATATCCATGTAAAGAAGAAGAGAC ......x...........x:.x......x..:..--.:::........::..:..:...::x.....x..:::.x.x...x.x.x.. 34M2D51M 60/85 70.6% 85/94230402 0.0% 2/85 2.4% -7082874 -87147528 +3105 chr4 + 190214555 34666235 34666234 34666297 63 ATATATATGTATATCTGTGTGTATATATATGTATATGTATATATACATATATATACACACACA chr4 + 94230402 70094147 70094146 70094209 70094147 70094146 70094209 63 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA ....:.:...x.:.:...x.....:...........:x.:.xx.x....x.....:.::.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -35427912 -58802490 +3187 chr4 + 190214555 34669692 34669691 34669866 175 TTCAGTATTATTTAAATAAAAACTTTAGAACCTCATGGAATGTGTGCAAGTAATT-CCTGTATCTTTTCATTAC--AATAACAACACTTTAACAGAAGTAGAATTTTTTTTAACGAAGTGACTTTTCTTTTTTCTTTTTCTTTTTTATTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 72001314 72001313 72001481 72001314 72001313 72001481 168 TTCAGCAAAAGCTAAAAAAAAAAAT--GAAC----TGCAATAT-TGCCAGCAATTGTCAGTGAAACTTTATCACTTAATGGATATGCTTTCATACAATTTAAATTCTC---AATTAACTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCT .....:.xx.x:....x.....xx.--....----..x...:.-...x..:....-:.x..:xxx:..:..:..--...::xx.::....x.:.x..x.x:....:.:---..:x..x.....x:::.:::....x:.:.:.x...x.......:...:.:.........:.::..:. 25M2D4M4D8M1D11M1I18M2I32M3D67M 107/165 64.8% 168/94230402 0.0% 13/165 7.9% -37331622 -56898780 +3439 chr4 + 190214555 34683003 34683002 34683099 97 TTTCTTCCTTTCTTCTTCTCTTTCTTTTTTCTTTTCTTCTTTTCCTTCATTTTCTTTCCTTTCCCCTCCTTTTCTTTTTTCTTTTTACACAGTATCT chr4 + 94230402 36195291 36195290 36195386 36195291 36195290 36195386 96 TTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTTAGCGTTTTTA-ACAGGATCT ......:...x:..:.::.:...:::...x:..x.:..xxx..:x:......x...:....x....::.....x...xx:x......-....x.... 87M1D9M 65/96 67.7% 96/94230402 0.0% 1/96 1.0% -1512288 -92718114 +3226 chr4 + 190214555 34698098 34698097 34698193 96 TACTCTTAAGGCAGTCTTCCATGTTGCTATGTATGCCAATATTTCCCAATATAGGACAAATGTGAGGTTACCCAAATA-GTACCTTGTAGCAAAACA chr4 + 94230402 42583242 42583241 42583336 42583242 42583241 42583336 95 TATTTTTAAAGCAGTCTCTCATGTTGACATATATTCTGTTATTTTTCAAGATATGACATACTCAAGGGTACACTGGTATGTACATCAT--TAAAACA ..:.:....:.......::.......x:..:...x.::x.....::...x...x....x.:x::...x...x.x::..-....x.::.--:...... 78M1I9M2D7M 64/94 68.1% 95/94230402 0.0% 3/94 3.2% -7885144 -86345258 +4002 chr4 + 190214555 34711687 34711686 34711793 107 ACAACAAAAATGAAAGAAAGGAAGGCAGAAAGGAAG------------GGAGGGTGGAAAAAAAGAAAGAAGAAAGAAAGGAAAGGAAAGAAGAAAGGTAAAGGGAAAGGAAAAAGGAA chr4 + 94230402 57629670 57629669 57629788 57629670 57629669 57629788 119 ACAGCAAGAATAGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ...:...:...::x:..x:..x:.:.....:.:...------------:...:.:::.xx..x.xxx.x..:.......x....:.:...........x....:..:........:.:. 36M12I71M 73/107 68.2% 119/94230402 0.0% 12/107 11.2% -22917983 -71312419 +3118 chr4 + 190214555 34738727 34738726 34738795 69 TTTTTTTTTGTTTTTATTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAAATGGAATCTTGCT chr4 + 94230402 42857390 42857389 42857458 42857390 42857389 42857458 69 TTTCTTTTTCTATTTCTTGAATTTCTTTCTTTTTGTATTTTTCTGCTCTCTTTGAAATGACATTTAGCT ...:.....x.x...x..xx:...:...:.....x.x.....:.x:...:.........:x..:.x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -8118663 -86111739 +4542 chr4 + 190214555 34767470 34767469 34767753 284 AATCCTAACTCCTGGGCTCTCCATGTGCTACAGAATAGATTAAATGCTTCAAAAGAAAGAATATGTTTTGGCAGCAGTGCTAGATCTATATCCCCACGGCAAAATTGAAGACATAGTTGCATTCAATACAGACATAGATCTTCAGAAAGATATTTTCATAAGCAAGCTTTGCAGGCATTCAGCTGTGCGTGC----------------------------CAAGAATATCTCATGAAACAGAGTGCA---GGTCTGGAATGAACACACTGGAGTATAGAGGAGACTGTTGAAACAGTAACTGCTTCAGTGACACC chr4 + 94230402 73589725 73589724 73590026 73589725 73589724 73590026 302 AGCCCTATTTTTTGTACTTTCTACAGACATTGGGAACAACACAGTATTTTGAAAGATAAAGTATGTGTTGACAACAGTGCTTGATCCATGTTTCCAGGGAATAATTGAAATTATATTCCCACCCTA---ACACACAAATTGCAAGCAAG--CTTTCCCAAATAAAACACTGCAGGC--TAAGCTACTCTCTCTCTTATTTCTTCTCGGATCTCAGAAACTTAAGTACACATAATGAAACAGATTGCAAATAGCTTAGAATG------TTCCAAAATACAAAAGACTTGTACAACAGTAACAACTACATTGGCACC .::....x:.::..x:..:..:.::x:.xx::.:.xx:.:xx.:.::..::.....x.:.:.....x...:..:.......x....:..:.::...x..x.x.......:x:...x.:x..::.x.---.x...:.:..:x:x..x...--x...:.xx..xx..:.x:.......--.x....::x.x:x.----------------------------:...x.:.:x.x..........x....---:.::.:.....------:.xx.:x...x.::.....xx.:x.........x:..x..x..:.... 126M3D20M2D25M2D14M28I27M3I11M6D48M 166/271 61.3% 302/94230402 0.0% 44/271 16.2% -38822255 -55408147 +3008 chr4 + 190214555 34769428 34769427 34769475 48 GAGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAGGGGGGGGGGGG chr4 + 94230402 57721080 57721079 57721127 57721080 57721079 57721127 48 GAGTTAAAGAGACTTCTTCCAAAAAAAAAATAAAAAGGGGGGGGGGGG ...x:.:x......:.x..:x.........x................. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -22951652 -71278750 +3163 chr4 + 190214555 34777644 34777643 34777721 78 TTTTAAATTGCTGATCACTAAGTAAACATTCTTTTTTTCTCTTTGATATCTTCTTTTTCTCTAAAATAAAAATGACAT chr4 + 94230402 14648514 14648513 14648591 14648514 14648513 14648591 78 TTTCAAAATGTAGGAAGTTAGAAAAACATTCATTTTTCTTTTTTCTTCTTGTCTTTTTCTTAAAAATAAAAAAGACAT ...:...x..:x.:xx::..::x........x.....::.:...xx.x.:x.........:x..........x..... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 20129130 NA +3252 chr4 + 190214555 34783171 34783170 34783264 94 GTGGTA-ACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTTAATCTGGGAAGCGGAGGTTGCAGTGAGCCAAAATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....:-..x..................::........x.x::x...x.....x..:.::.:.:x:xx:..:..:..------..x..x...... 6M1I70M6D12M 63/88 71.6% 89/94230402 0.0% 7/88 8.0% -41250030 -52980372 +3009 chr4 + 190214555 34797180 34797179 34797260 81 TCCTTCCTTCTTCCCTCCATCCCTCCCTCCTTCCTTTCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT .:...::..x..:x...xx.:.x..:x.x:..:....:x:..x.:.x..........:.........:.:::xx....... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 10820679 NA +3638 chr4 + 190214555 34797203 34797202 34797392 190 TCCCTCCTTCCTT-----TCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTC-------TTTCTTTCTTTCTTT---CTTTCTTTCTTTC---------TTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792639 85792638 85792852 85792639 85792638 85792852 214 TCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ..:..::...:..-----.....::..xx.....x:x.:x....x...:x.:.:-------:..:..:......:.---...x..:.::x..---------:..x.:.:x...::...:...x:.:...::..x.x:x.x.:.:..x:x:........:xxx...x::..:::x:...x.:..x..xx.:......:...:.:.:....:.::. 13M5I36M7I15M3I13M9I113M 114/190 60.0% 214/94230402 0.0% 24/190 12.6% -50995436 -43234966 +3035 chr4 + 190214555 34797209 34797208 34797293 85 CTTCCTTTCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ...::.:.:..::.x...:.x..:.:..::.:.:...xx:.x..x.:.........:...::...x.....x.:xx..x.:.:.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% -22574817 -71655585 +3301 chr4 + 190214555 34797252 34797251 34797330 79 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTT chr4 + 94230402 39929912 39929911 39929990 39929912 39929911 39929990 79 TTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTTGGCTTCCTTTCCTCTCCATGTCTTTCTCCCTCCCTTTT ......::x..:.x.:..xxx..xx..:..:..:...:...xx...:.......:..:x.x........:...:..:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -5132660 -89097742 +3712 chr4 + 190214555 34797260 34797259 34797469 210 TTTCTTTCTTTCTTTCTTT--CTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCT---TCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTTCTTTT chr4 + 94230402 67728277 67728276 67728483 67728277 67728276 67728483 207 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCT--CTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCT------CATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCT .....x:..x....:....--......:x.......x:x:.:x.x...--..:...:..:.:..x:x:.::.:..x.x.....::..x.:.x..:x.:x.:x::.:.x:.x.:....::x::.:..x..::xx...:.....------.x....::.:x:.x:..x.x.---...xx:.......:xx::....:......x.::x::.:..::. 19M2I27M2D92M6D21M3I43M 118/202 58.4% 207/94230402 0.0% 13/202 6.4% -32931017 -61299385 +3330 chr4 + 190214555 34797289 34797288 34797459 171 CTTTCTCTT-TCTTTC-------CTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTC--CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTT chr4 + 94230402 63998059 63998058 63998239 63998059 63998058 63998239 181 CTTTATCTTCTCTTTCAGAGAAACTTTTCTTTTTGATTTCTTTTTCACATCCTTCAGTTCATCTCATTCACAGTAAACATACTACCTATGATTGCCTTGAACTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTT ....x....-......-------....:::...:xx.:...:.:..x.x.:....xx.::x....x.:.x.xx.xxx.x.x..x.:.x:--:.x....xxx:::......:.:..:.:x:x...:.........x..x:.:.:......xx:...:.:..x:.:.:.x::.....x.::.. 9M1I6M7I66M2I90M 103/171 60.2% 181/94230402 0.0% 10/171 5.8% -29200770 -65029632 +3840 chr4 + 190214555 34797319 34797318 34797438 120 TCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCC chr4 + 94230402 92917624 92917623 92917741 92917624 92917623 92917741 118 TCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTC--TCTGTCCACTTTCCCTCCCTGCC ..:.:..:...x:...:..:..:..x.:......::.:...:..:....::..xxx:x:....::::.:.x..xxx...x..:..:.x.::x...--..:x...x.:..........x.. 95M2D23M 74/118 62.7% 118/94230402 0.0% 2/118 1.7% -58120305 -36110097 +3089 chr4 + 190214555 34797387 34797386 34797480 94 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTCTT chr4 + 94230402 50176267 50176266 50176360 50176267 50176266 50176360 94 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTT ..:..x:..:x..x.::.....:.......:x.:.x:..x::::.x.x.:x:..::..:x......x.x..:x:....x.:......:...... 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% -15378880 -78851522 +3340 chr4 + 190214555 34797399 34797398 34797471 73 TTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTTCTTTTCT chr4 + 94230402 53757785 53757784 53757857 53757785 53757784 53757857 73 TCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT .::.....x..:..:::x...:::xxx.:...:...:...:......:..:....:.....:..:.:....:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -18960386 -75270016 +3500 chr4 + 190214555 34797403 34797402 34797478 76 TTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTC chr4 + 94230402 53757784 53757783 53757859 53757784 53757783 53757859 76 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCC ...::.:.:x:...::.:x.::...xxx....:...:...:...:..:....:...:.....:..:.:......:. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -18960381 -75270021 +3978 chr4 + 190214555 34865579 34865578 34865717 139 ATATGTATATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTG-----TGTGTGTGTGTGTGTATA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTA--TATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..x..:x....:......:.x.x....x.::...x..--...:..:x:::.....:x:.....:x....:....:..:x::.::x.x.....:...:.:....x..:..::..:::::.x.-----x..x.x....x.....:. 37M2D82M5I18M 87/137 63.5% 142/94230402 0.0% 7/137 5.1% 13756392 NA +3568 chr4 + 190214555 34865593 34865592 34865726 134 GTGTATATATGTGTGTA-------TATATATGTATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 5214181 5214180 5214321 5214181 5214180 5214321 141 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....:x.....x.:::.-------.::.x:...::x:...x.:.:::..x:....:.::::.x..:.x.::::::.:..x.::......::..x..:.........:.::x::.........::..::x..:.:.::.:.. 17M7I117M 75/134 56.0% 141/94230402 0.0% 7/134 5.2% 29651412 NA +3243 chr4 + 190214555 34865599 34865598 34865667 69 ATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:x.:...::.:::..x......:.x......:...:....:......::.x.:....::.x.:.... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -51768324 -42462078 +3733 chr4 + 190214555 34865601 34865600 34865711 111 ATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 21109187 21109186 21109297 21109187 21109186 21109297 111 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..x..:x....:..:...:.x.x....x:::...x.:.:.:..:x:.::....:x:.....:x...::..:.:..:x:...:x.x.....:.:.....:..x:.:..::.. 111M 67/111 60.4% 111/94230402 0.0% 0/111 0.0% 13756414 NA +3195 chr4 + 190214555 34865617 34865616 34865732 116 GTATATATGTGTATATATGTGTGTATATATATGTATATATGTGTAT--ATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAT chr4 + 94230402 5214204 5214203 5214321 5214204 5214203 5214321 118 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..::.x:....:x:..:x.:::.:..x::.:...::::.x....x.--.:.::::.x..::.:....:..x..::........:.::x::.........:..::.x..:.:.::.:.. 46M2I70M 65/116 56.0% 118/94230402 0.0% 2/116 1.7% 29651413 NA +4047 chr4 + 190214555 34865618 34865617 34865727 110 TATATATGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTA--TATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:......:.x.x....x.::...x..--...:..:x:::.....:x:.....:x....:......::x::..:x.x.....:.:.....:..x....::..::.:. 30M2D78M 71/108 65.7% 108/94230402 0.0% 2/108 1.9% 13756424 NA +3250 chr4 + 190214555 34865631 34865630 34865699 69 ATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:x.:...::.:::..x......:.x......:...:....:......::.x...:..::.x...:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -51768292 -42462110 +3161 chr4 + 190214555 34865633 34865632 34865749 117 ATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAT--ATATATATATATATGAG chr4 + 94230402 21109187 21109186 21109305 21109187 21109186 21109305 119 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAG ..x..:x....:..:...:.x.x....x:::...x.:.:.:..:x:.::...::x:....::x.:.::..:...::x::..:x.x.:.:.....:.:...--....::..::.:.:... 100M2I17M 67/117 57.3% 119/94230402 0.0% 2/117 1.7% 13756446 NA +3027 chr4 + 190214555 34865655 34865654 34865720 66 ATGTGTATATATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:....:xx...:.::.:x.:x.:x..x:.:...........:.........::..::...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 7540164 NA +3060 chr4 + 190214555 34865664 34865663 34865724 61 TATGTGTGTATATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 27325496 27325495 27325556 27325496 27325495 27325556 61 TATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ....xx......:.:x..x.:x.:x:.:...........:.........:::..:...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 7540168 NA +3130 chr4 + 190214555 34865682 34865681 34865744 63 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x::.x.....x.................:.xx..:..x::...:....:..x...:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -50968851 -43261551 +3009 chr4 + 190214555 34865684 34865683 34865747 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATG chr4 + 94230402 79265520 79265519 79265583 79265520 79265519 79265583 64 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTG ............::........xx...:.:..:...:.::.:.::.:.:::.x.:....x.:.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -44399836 -49830566 +3239 chr4 + 190214555 34865685 34865684 34865750 66 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATGAGT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx...:....:...:.::.:.::.:.:::.x.:....x..x.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -44399834 -49830568 +3225 chr4 + 190214555 34865687 34865686 34865746 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............::........xx........:...:.::.:.::.:.:::.x.:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -44399832 -49830570 +3315 chr4 + 190214555 34865688 34865687 34865747 60 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATG chr4 + 94230402 85834541 85834540 85834600 85834541 85834540 85834600 60 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG .....x.................:.xx..:..x::...:....:..x...:..:.x.... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -50968853 -43261549 +3178 chr4 + 190214555 34865692 34865691 34865746 55 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834595 85834541 85834540 85834595 55 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .....x...................xx..:..x::...:....:..x...:..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -50968849 -43261553 +3087 chr4 + 190214555 34865694 34865693 34865747 54 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATG chr4 + 94230402 85834541 85834540 85834594 85834541 85834540 85834594 54 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATG .....x...............:...xx..:..x::...:....:..x...:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -50968847 -43261555 +3893 chr4 + 190214555 34867333 34867332 34867401 69 CATATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033209 76033208 76033277 76033209 76033208 76033277 69 CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:....:...........::........x.xx.x...x.............:..x.xx:.....:.. 69M 53/69 76.8% 69/94230402 0.0% 0/69 0.0% -41165876 -53064526 +3076 chr4 + 190214555 34915934 34915933 34916024 91 CACTACATCCTGGGTGACAGAGTGAGATTTAAAAAAAAAAAAAGAAAAAGAAAGAAAGAGAGAAAGGAAGGAAGGGAGGAAGGAAGGAAGG chr4 + 94230402 92119515 92119514 92119605 92119515 92119514 92119605 91 CATTGCTTTCTGAATAATCCATAGAGATTTTAAAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAAGCCATGGACGG ..:.:.x.:...::.:.:xx.xx.......x...:x:......:.....:.......x.:.......x.xx:...::::.:xx.x...x.. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% -57203581 -37026821 +3477 chr4 + 190214555 34923037 34923036 34923111 75 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAGGTGGGGGTT chr4 + 94230402 76033201 76033200 76033273 76033201 76033200 76033273 73 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ......--...x......:.........:.::........x.xx.x...x.........:::.:..x.xx...:. 6M2D67M 55/73 75.3% 73/94230402 0.0% 2/73 2.7% -41110164 -53120238 +3193 chr4 + 190214555 34926471 34926470 34926511 41 CTTTCTTTCTTCTTTTTTTTTTTTTTTTCGCATAGGCATTA chr4 + 94230402 90332807 90332806 90332847 90332807 90332806 90332847 41 CTTTCTTTCTTTCTTTTTTTTTTTTTCCTGCATAGGCATTA ...........::.............:::............ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -55406336 -38824066 +3469 chr4 + 190214555 34927058 34927057 34927183 126 CAGAACTAAAAGTATATATATATATATATATATATATATATATATACACACACACACACATATACACACACACATATACACATATATATACACATGTATA-----------TATATATGTGTGTGTATATATATATA chr4 + 94230402 54005666 54005665 54005799 54005666 54005665 54005799 134 CAGAATCAACAAATTATAT---TGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTA .....::..x.:xx.....---.:x.:.:....:...x..........:...........:.x.x.:x:::x.xxx.:....x.x.xx....:.......-----------....:.....:xx..x.:.:.:.x.. 19M3D78M11I26M 83/123 67.5% 134/94230402 0.0% 14/123 11.4% -19078608 -75151794 +3028 chr4 + 190214555 34927095 34927094 34927145 51 ATATATATACACACACACACACATATACACACACACATATACACATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x......:......::::.......x.:x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -11213761 -83016641 +3202 chr4 + 190214555 34927101 34927100 34927149 49 ATACACACACACACACATATACACACACACATATACACATATATATACA chr4 + 94230402 74526074 74526073 74526122 74526074 74526073 74526122 49 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA ..x...............:x...:.....x.....:..:.......::. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -39598973 -54631429 +3416 chr4 + 190214555 34927117 34927116 34927187 71 ATATACACACACACATATACACATATATATACACATGTATATATATATGTGTGTGTATATATATATATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:...:.:x.....::.x...:..::.....x.x:...:.....x.............::..::.::.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 12326919 NA +3656 chr4 + 190214555 34927504 34927503 34927635 132 ATAATATATATAATATATATTACTTATATATAATATATAATATATATAATATATATTACTTATATATAATATATAATATATATAATATATAATATATAATATATATAATATATAATATAT--ATAATATATATA chr4 + 94230402 46018807 46018806 46018929 46018807 46018806 46018929 123 ATACTGCATATCATCCA-ATGATTCATAGATCGTATATGGTATATGCTGTG----------ATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATA ...x.::....x..x:.-..x.:.:...x..x:.....::.....::x:.:----------......:...x...xx::.............x.x........:.xx.:...x.......--:.x:...:.... 17M1D33M10D59M2I12M 85/121 70.2% 123/94230402 0.0% 13/121 10.7% -11091303 -83139099 +3210 chr4 + 190214555 34927529 34927528 34927609 81 ATATATAATATATAATATATATAATATATATTACTTATATATAATATATAATATATATAATATATAATATAT-AATATATAT chr4 + 94230402 36606087 36606086 36606168 36606087 36606086 36606168 82 ATGTCTAATGTATATTTTATATCAAATAATTTACATGTATATAATATATAGAGTGTATTATATTAAAAATGTGAACATATAT ..:.x....:....x.x.....x.x...xx....x.:.............:x:.:...x....xx..x..:.-..:...... 72M1I9M 60/81 74.1% 82/94230402 0.0% 1/81 1.2% -1678558 -92551844 +3676 chr4 + 190214555 34927744 34927743 34927869 126 ATTTATATATATACACA-TATATATAATTTATAT------ATATACACATATATATAAATTATATATATACATATATATATATATATATATATATATATATATATATATATATATATATATT-CACAAGGTGAA chr4 + 94230402 69752180 69752179 69752313 69752180 69752179 69752313 134 ACCTACCTATGTACTCAGTATATTGAGTTTTCATGTCTTTATGTACACACATATGCAATGTAAATATTTACATATAGAGATATTTACATTTACATTAAAATATTTAGACATATTTGTACATTACACGTGATAAA .::..:x...:...x..-.....xx.:...x:..------..:......:....::..xx..x....x........x.x....x..:..x..:..xx.x....x..x.:....x.:..:...-...:x.:.:.. 17M1I16M6I82M1I11M 88/126 69.8% 134/94230402 0.0% 8/126 6.3% -34824436 -59405966 +3175 chr4 + 190214555 34927797 34927796 34927875 79 TATATATATACATATATATATATATATATATATATATATATATATATATATATATATATATTCACAAGGTGAAGTCCCA chr4 + 94230402 46063300 46063299 46063378 46063300 46063299 46063378 79 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTA ..:..:.:.....:.:...:x::.:..:.x:..:...:.x......:......:xxx....x:........x.:.x.:. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% -11135503 -83094899 +3038 chr4 + 190214555 34980483 34980482 34980541 59 GCACCTGTAGTCCCAGCTACGTGGGAGGCTGGAGCGAGAGGATGACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:........x..::......::x.xx.x.:.xx............:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -41052723 -53177679 +3173 chr4 + 190214555 35004980 35004979 35005060 81 GTGGTGTGCCCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGATTCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......----...x......:.........::::........x.xx.x...x.:......:..:.:.x::xx:..:..:.. 6M4D71M 54/77 70.1% 77/94230402 0.0% 4/77 5.2% -41028221 -53202181 +3319 chr4 + 190214555 35041997 35041996 35042069 73 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTCAACTCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::........x.xx.x...x::...x...:.:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -40991208 -53239194 +3092 chr4 + 190214555 35042131 35042130 35042195 65 AAAAAAAAAAAAAAAAAAGAAAAAAGGAAAAAAAAGATATCACAATTTTTACTGAATCTTAGCTT chr4 + 94230402 25021110 25021109 25021174 25021110 25021109 25021174 65 AAAAAAAAAAAAAAAGAATAGAAAAAAATACAGAATCCATCACAGTTTTTACAGATACTTAAGTT ...............:..x.:....::.x.x.:..xx:......:.......x..xx....:x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 10021021 NA +3630 chr4 + 190214555 35044373 35044372 35044450 78 TGGTGCATGCCTGTAGTTCCAGCTAGTCAGGTGGCTGAGGCAGGTGGATCACTTGAGCCCAGAATATCAAGGCTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.--..............x.::::x.......x.xx...:.x.......:.......xx.:x:.....:.. 9M2D67M 57/76 75.0% 76/94230402 0.0% 2/76 2.6% -40988829 -53241573 +3015 chr4 + 190214555 35054389 35054388 35054430 42 TTTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTATTTTGA chr4 + 94230402 76208474 76208473 76208515 76208474 76208473 76208515 42 TTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTGA ....x..........................x:..x..:... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -41154085 -53076317 +3441 chr4 + 190214555 35147528 35147527 35147608 81 CATGGTGGCATGCTCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGT chr4 + 94230402 76033197 76033196 76033275 76033197 76033196 76033275 79 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ..::....--...x.x......:.......:...::........x:xx.x...x.:.........:.:..x.xx:..:... 8M2D71M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% -40885669 -53344733 +3034 chr4 + 190214555 35154841 35154840 35154875 35 AAAAAACAAAAAACAAACAAAAAAAACCCACTAAA chr4 + 94230402 22790720 22790719 22790754 22790720 22790719 22790754 35 AAAAAACAAAAAACAAACAAAAAAAACCCACAAAA ...............................x... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 12364121 NA +3294 chr4 + 190214555 35200728 35200727 35200793 66 TATCTTTCTTTCTTTTTTTTTTTCTTTTTTTTTTTTGTGTGTGTGTGTGTGTTGGTTTTTTTGTAG chr4 + 94230402 26257030 26257029 26257095 26257030 26257029 26257095 66 TGTTTTTGTGGCTCTTGTCCTGTCTTTTTTTTTTTTTTGTGTGTGTGTGTATTTGTGTATTTGAAG .:.:...x.xx..:..x.::.x..............x.............:..x..x.x....x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 8943698 NA +3157 chr4 + 190214555 35200745 35200744 35200794 50 TTTTTTCTTTTTTTTTTTTGTGTGTGTGTGTGTGTTGGTTTTTTTGTAGA chr4 + 94230402 38145894 38145893 38145943 38145894 38145893 38145943 50 TTTCTTCTTTTTTTTTTTGTTTTGTGTGTGTGTGTTGTTTTTGTTGGAAA ...:..............xx.x...............x....x...x.:. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -2945149 -91285253 +4862 chr4 + 190214555 35202294 35202293 35202625 332 ACTATATAAATATATATAAAAATATATATAAATATATGTAAACATATATGAAAATATATGAATATATAAATATATAAATATATATG----AATATATATA----TGAATATATATGAATCTATATAAATATATGAATATATATAAATATATATGAAA----ATATATAAATATATAAATAATATATATGAATATATATAAATGTATAA----ATATATAAATATAAATATAAATATATAAATATATATATAAATATAAATATATAAATATATATATAAATATAAATATATAAATATATAAATATA------TATATAAATATAAATATATAAATATATATATAAATATAAATAT chr4 + 94230402 45140555 45140554 45140887 45140555 45140554 45140887 333 ACCGTATAATTTTATTTAACCATACAT---------TTTAACCATAGATTTTAATTTCAGAACTTTAAAAGATAAGAAAATCTTAGCCATAATATGTTTTGTCTTTAATATCTTTGACT-------AAAACATTAATGTTCACACATGTATGCGATGCATCACATTCAAATAGATGCAT----TAAATGCATTTGTTTAAATGTGTAATACTGCAAATAAACACAAGCACGCAGATTTCAAAGCATAGGTAAATATAAACATATAAATAGACATATAAAAATACACATAGACAAAAATAAGAACGCTTCATTATATAAAAATGCTTTAAGAAAGATAGA-ATTAGTATGTATAT ..::.....x.x...x...xx...:..---------.x...x....x..xxx...x.xx...:x.xx...x...x:..x..x.xx.----.....:.x.x----.x.....x.x...x.-------..x.:..x...:.x:.:.x..:...::..x:----.:..x:.....x..:x..----..x...x..x.:.x.......:...----::.x.....:.:..::.::x.x..x.x..x::...x:..........:.........x.:.......x...x.:...x.x.x.x....:x.::------........x..:xx.xx.x...x...x.-..x.:...:x.... 27M9D50M4I10M4I15M7D31M4I18M4D25M4I93M6I28M1D14M 206/311 66.2% 333/94230402 0.0% 43/311 13.8% -9938261 -84292141 +3405 chr4 + 190214555 35202442 35202441 35202654 213 AATATATAAATATATAAATAATATATATGAATATATATAAATGTAT-AAATATATAAATATAAATATAAATATATAAATATATATATAAATATAAATATATAAATATATATATAAATATAAATATATAAAT----ATATAAATATATATATAAATATAAATATATAAATATATATATAAATATAAATATATAAATATCTATAAATATAAGTATATATA chr4 + 94230402 45140673 45140672 45140886 45140673 45140672 45140886 214 AATGTTCACACATGTATGCGATGCAT-CACATTCAAATAGATGCATTAAATGCATTTGTTTAAATGTGTAATACTGCAAATAAACACAAGCACGCAGATTTCAAAGCATAGGTAAATATAAACATATAAATAGACATATAAAAATACACATAG--ACAAAAATAAGAACGCTTCATTATATAAAAATGCTTTAAGAAAGATAGA-ATTAGTATGTATA ...:.x:.x.:..:..x:::..::..-::x..x:.x...:...:..-....::..xx:.x.....:.:x.xxxx.:x.x...x.:.:..::.::x.x..x.x..x::...x:..........:........----.......x...:.:...:--.:...x...x:..:::x.xxx..x...x....::x.x..x.xxx...:.-..x.....:.... 26M1D19M1I84M4I18M2D49M1D13M 128/209 61.2% 214/94230402 0.0% 9/209 4.3% -9938231 -84292171 +3089 chr4 + 190214555 35203600 35203599 35203671 72 TATATATAAATACATATAAATATATATACAAATATATATAAATATATATACACACACATATATGTATATATA chr4 + 94230402 20811747 20811746 20811818 20811747 20811746 20811818 72 TACACAGAAAAACATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTA ..:.:.x...x.....xxx.x..x.x..:x......:.:.:.x..........xx.:............:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 14391853 NA +3059 chr4 + 190214555 35233916 35233915 35234018 103 AGCATATATATATACACATATATACATATATATACATATATACATATATATATGTATATATATATGTGTGTGTGTGTTTGTGTATCCATGATCATTAGAGAAA chr4 + 94230402 22600179 22600178 22600281 22600179 22600178 22600281 103 AGCACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAA ....:.x.x..x:.x:x.x.:.:......x:.:.:::.x.:....::...:.x:x....:.....x.........:.x..::.::x.:.:.x::x...x.... 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 12633737 NA +3071 chr4 + 190214555 35233929 35233928 35233999 71 ACACATATATACATATATATACATATATACATATATATATGTATATATATATGTGTGTGTGTGTTTGTGTA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .....:....x..:..::.x...:..::.:.:.x.x..........x.:.:.....:.:..::.x:::... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 12633731 NA +3152 chr4 + 190214555 35237323 35237322 35237417 95 ACACATATATGCACACACACACACACACACACACACACACACACACTTGTGCTTTTAATTATTTGCTTTAATTGTATTTTTTATTTGAACAGATA chr4 + 94230402 89823929 89823928 89824023 89823929 89823928 89824023 95 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCCCATGAGAAAAAATA ..x:.......x.:..................x:.:.xx:.:.:.:x:..::.:.x.:....x.....:x.::x:.x.::::..xx...x.:... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -54586606 -39643796 +3139 chr4 + 190214555 35254522 35254521 35254611 90 GCACCTATAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGAGCTTGTAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x.:....:.........:.::........x.xx.x...xx:.x.........:..x:xx:.x:.....------:.x...:..... 72M6D12M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% -40778684 -53451718 +3283 chr4 + 190214555 35264618 35264617 35264675 58 AGACTCTGTCTCAAAAAAAGAAAAAAAAAAACAAAAACAAAAACAAACAAACAAACAA chr4 + 94230402 68134247 68134246 68134304 68134247 68134246 68134304 58 AGTCTCCCTGTAGGAAAAGGAAAAAAAACAACAACAACAAAAACAAACAAACAAGAAA ..x...:x.x.x::....:.........x.....x...................:x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -32869629 -61360773 +3089 chr4 + 190214555 35264620 35264619 35264679 60 ACTCTGTCTCAAAAAAAGAAAAAAAAAAACAAAAACAAAAACAAACAAACAAACAAAAAA chr4 + 94230402 73193168 73193167 73193227 73193168 73193167 73193227 60 ATTCTGTCCAAACTAAAAAATATCTAAAACAAAAACAAAACCAACCAACCAAACAAAAAA .:......:x..xx...:..x.xxx...............x...x...x........... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -37928548 -56301854 +3996 chr4 + 190214555 35269769 35269768 35269897 129 TCCTTCCTTTTCTCTTTCTTTTTCTTTCTT-----TCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCT-------TTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCT chr4 + 94230402 3415315 3415314 3415455 3415315 3415314 3415455 141 TCTTTCCTTTCCTATTCTTTTTTCATTCCTAGTCCTATTCCTTTCACATTCCTATTCAATTCCTATTCCTTCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTTTGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCT ..:.......:..x..::......x...:.-----.x..:....:x.x...:.x:.:xx..::.x.::...::.-------.:..........x..........x.:......::x:xx::.x.:.:x:..:...:..... 30M5I39M7I60M 85/129 65.9% 141/94230402 0.0% 12/129 9.3% 31854454 NA +3843 chr4 + 190214555 35269786 35269785 35269926 141 CTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCT----------TTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTTCTTTCTTTCTTCCCC chr4 + 94230402 21408807 21408806 21408950 21408807 21408806 21408950 144 CTTTTATTTTCCTTTTTACTGGTTCTTTCTAT-------TTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCC .....x:....:..:..x..xx........x.-------...x...:........xxx:.xx...:.:.:..::..:----------....:.....::........:::...xx:...x..x:xxx...x::......::.x:...:... 32M7D38M10I64M 89/134 66.4% 144/94230402 0.0% 17/134 12.7% 13860979 NA +3005 chr4 + 190214555 35269788 35269787 35269836 49 TTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTC chr4 + 94230402 51335344 51335343 51335392 51335344 51335343 51335392 49 TTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC ..:..x....:.....x.....::..:...:..:...:...:....... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -16065556 -78164846 +3038 chr4 + 190214555 35269799 35269798 35269911 113 TCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTT chr4 + 94230402 32895607 32895606 32895719 32895607 32895606 32895719 113 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTT ........::.x...:..:..x..x..:.:.x.x...::.x..xx....x..xx:x...::..x:::.::::.x.:x......x.....:......xx..:x:x.x.:..:.. 113M 68/113 60.2% 113/94230402 0.0% 0/113 0.0% 2374192 NA +3779 chr4 + 190214555 35269806 35269805 35270000 195 TTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTC-----TCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTTCTTTC-----TTTCTTCCCCTTCCTTCCCCTCCCTCCCTCCGTCTCTCCCTTCCTTCC-TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCT chr4 + 94230402 67728276 67728275 67728480 67728276 67728275 67728480 205 TTTTCTGCCTGTCTTCCTTTGGCT-TCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCT ......x:..x....:....xx:.-.....x..::.::x.x:..x.x:.......:....:.-----:.:....:x.x.....::..x:.:x...x..x:.x:::..x:.x.....-----:....x....xx:::.::....x::.:....:..x.:.x.x.xxx...-x....:....xx:.....::..:::x:.:x...:.. 24M1D37M5I49M5I48M1I36M 117/194 60.3% 205/94230402 0.0% 12/194 6.2% -32458470 -61771932 +3176 chr4 + 190214555 35269813 35269812 35269903 91 TCTTTCTTTCTTTTTTTCTCTTTCTT-------TCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTT chr4 + 94230402 51335293 51335292 51335390 51335293 51335292 51335390 98 TCCTCCTTATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTT ..:.:...x:x.:.....xx.:x...-------.:..:.xx......x.xx..:..x..........x....:.:.:...:....:....:.::.:.. 26M7I65M 62/91 68.1% 98/94230402 0.0% 7/91 7.7% -16065480 -78164922 +3213 chr4 + 190214555 35269840 35269839 35269905 66 CTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTT-----------CTTTCTTTCTCTTTTTTTCT chr4 + 94230402 56907963 56907962 56908039 56907963 56907962 56908039 77 CCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTCACCTTATTACT .:.....:.:...:x....:...:.....:...:....:.......-----------:........x.:..x..x.. 46M11I20M 51/66 77.3% 77/94230402 0.0% 11/66 16.7% -21638123 -72592279 +3682 chr4 + 190214555 35269857 35269856 35270016 160 TTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTTCTTTCTTTCTTCCCCTTCC---TTCCCCTCCCTCCCTCCGTCTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTGCCCCCCACCCCACAC chr4 + 94230402 67728276 67728275 67728435 67728276 67728275 67728435 160 TTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTAC---TCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCAC ......x:..x....:....xx:......x..::..:x.x:..x.x:....:...:..:.::.x:x...:.::.---..:.:.:.:x:..x..:..:x..x.---:.:.x..x.:....::x::.:..x..::xx...:.....:x.x.:.:...:.x.x... 74M3I25M3D58M 93/157 59.2% 160/94230402 0.0% 6/157 3.8% -32458419 -61771983 +3098 chr4 + 190214555 35311710 35311709 35311804 95 TTCTTTAATTGAAAAACATTTTCAAAGACTTATCTATATTCTCTCTTTCCATTTCCTGTTTTTTTTTTTTTTTTTTTTTTTTT---TTTGCTTCTATT chr4 + 94230402 68602953 68602952 68603050 68602953 68602952 68603050 98 TCCTCCCAGTTAAAAAAATACTCAAGGACTTTTCATTACTTTCAGTTGTCATTGGTTGTTTTGTGTTTTTTTTTTTTTTCCATAAATCTGCTTTGATT .:..::x.x.x.....x..x:....:.....x..xx..:.:..xx..x:....xx:......x.x..............::x.---.:.....:x... 83M3I12M 65/95 68.4% 98/94230402 0.0% 3/95 3.2% -33291243 -60939159 +3477 chr4 + 190214555 35330215 35330214 35330333 119 AATAGAAAACAAAATATTTTATAAAATATGCAGGATTTTATTAAATTAATACAAACAATTCTGGATAACTGAAAAGCCAACCACAATGAAGTGATGACATTTACAAGCGTAGTGACGTG chr4 + 94230402 41989664 41989663 41989777 41989664 41989663 41989777 114 AATAGCAAATGAAATATGATATAAAATATGCAAAATAATAGTACATTAGCCTAAACAATGCTAATAAATTGCAAAGCTTAGC---ATGAAAT--TGAAAATCACTAATGGAGCAGTGTG .....x...::......xx.............::..xx..x..x....::x:.......x..::xx..:..x.....:x.x.---.....:.--...x.x.:..x.::.x..::::... 82M3D7M2D25M 77/114 67.5% 114/94230402 0.0% 5/114 4.4% -6659449 -87570953 +3024 chr4 + 190214555 35335179 35335178 35335217 39 GGTGGGGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTT chr4 + 94230402 76801334 76801333 76801372 76801334 76801333 76801372 39 GGTGGGGTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTT .........................x..xx......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -41466155 -52764247 +3104 chr4 + 190214555 35339226 35339225 35339269 44 CCCTTTATATATATATATATATATATATACACACACACACACAC chr4 + 94230402 85078504 85078503 85078547 85078504 85078503 85078547 44 CTCCTAATATATACAGATATCTATATATACACACACACACACAC .:.:.x.......:.x....x....................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -49739278 -44491124 +3355 chr4 + 190214555 35339230 35339229 35339348 119 TTATATATATATATATATATATATACACACACACACACACACACACACGTATATATACACACATATGTATATATACATATATGTATATATACACACACATATGTATATATGTGTGTGTA chr4 + 94230402 54005684 54005683 54005799 54005684 54005683 54005799 116 TTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT---TAGCTTTATACATGTGCTAGTTTGTGTGTTTA ..:x.:.:....:...x..........:.............x.x.:x:..x:xxx.:....x.x.xx..:....::...x:.:.---..xx:x:.:....:..:xx:.x.......x.. 84M3D32M 75/116 64.7% 116/94230402 0.0% 3/116 2.6% -18666454 -75563948 +3137 chr4 + 190214555 35339232 35339231 35339298 67 ATATATATATATATATATATATACACACACACACACACACACACACGTATATATACACACATATGTA chr4 + 94230402 61270775 61270774 61270841 61270775 61270774 61270841 67 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ..:x......x.:.......:..:.:..:...::.....x....x.:.:....x::.....xx..:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -25931543 -68298859 +3036 chr4 + 190214555 35339235 35339234 35339274 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 30930153 NA +3008 chr4 + 190214555 35339243 35339242 35339290 48 TATATATATATACACACACACACACACACACACACGTATATATACACA chr4 + 94230402 89823932 89823931 89823979 89823932 89823931 89823979 48 TATATATGGATACACACACACACACACACTTATAACTATATATACGTA .......:x....................x:.:.xx.........::. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -54484689 -39745713 +3040 chr4 + 190214555 35339244 35339243 35339289 46 ATATATATATACACACACACACACACACACACACGTATATATACAC chr4 + 94230402 46140856 46140855 46140901 46140856 46140855 46140901 46 ATATATATACACACACTCTCACATACACACACGTGTATATACAGAC .........:......x.x....:........::.......:.x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -10801612 -83428790 +3400 chr4 + 190214555 35339286 35339285 35339361 76 ACACACATATGTATATATACATATATGTATATATACACACACATATGTATATATGTGTGTGTATATACACATATGT chr4 + 94230402 22600198 22600197 22600267 22600198 22600197 22600267 70 ACACACATATTCACATGCAAACACATGCATA------CAAAAATATGTATATTTGTGTGTGTATATGCATGCACGT ..........x:.:..::.x.:.:...:...------..x.x..........x.............:..:::.:.. 31M6D39M 53/70 75.7% 70/94230402 0.0% 6/70 8.6% 12739088 NA +3070 chr4 + 190214555 35346325 35346324 35346366 42 AAAAATAAACAAATAAACAACAACAACAAAAAAATCCCAGTC chr4 + 94230402 81996045 81996044 81996086 81996045 81996044 81996086 42 AAAAACAAACAAACAAACAACAACAACAAAAAAACCTTATTC .....:.......:....................:.::.x.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -46649720 -47580682 +3980 chr4 + 190214555 35352243 35352242 35352316 74 GTGTGCCTATAGTTCCAGCTACTTGGGAGGCTGAGGCCGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.:................::........x..x.x...x::...........:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -40680961 -53549441 +3172 chr4 + 190214555 35361660 35361659 35361739 80 CAAATAACAAGCTTTTTATTTCATTTATCTTTTTCTTTTTCTTTTTTTTTTTTTGGTTTATTTGTTTGTTCCAATTTCAT chr4 + 94230402 40150106 40150105 40150185 40150106 40150105 40150185 80 CAAATAATTAGCATTTTATTTCTGTACTCTGTTCCGTTTACTTTTATTTTTTTTTCCTTAATAATTTGTGAGAGTTTCAT .......:x...x.........xx.xx...x..:.x...x.....x........xx:...x.x:.....xxx.:...... 80M 58/80 72.5% 80/94230402 0.0% 0/80 0.0% -4788446 -89441956 +3449 chr4 + 190214555 35368672 35368671 35368728 57 ATGGGTTTTTTTTTTGTTGTTGTTGTTTGCTTTTTGTTTTTATGGGGTTTTTTTGAG chr4 + 94230402 77610500 77610499 77610550 77610500 77610499 77610550 51 ACAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTT------TTCATTTGAG .::..........................:...........------..:x...... 41M6D10M 46/51 90.2% 51/94230402 0.0% 6/51 11.8% -42241828 -51988574 +3049 chr4 + 190214555 35396643 35396642 35396701 59 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x......:...........::........x.xx.x...xx::x............ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -40636563 -53593839 +3581 chr4 + 190214555 35441422 35441421 35441502 81 TTCATACACATATATACATACATATACACACATATTAGTAATAATTTTAAAAACATT-----TCATTTACAAACATT-----TCAAAAAAA chr4 + 94230402 40029283 40029282 40029373 40029283 40029282 40029373 91 TTTACACACATACATACACACATATACTTACATATTTCTGGTAACTGTGAGAACACTTTGCATCATTTATAAATGATGATGCTCAAAAAAA ..:.:.......:.....:........x:.......xx.::...:.x.:.:....:.-----.......:...::x.-----......... 57M5I15M5I9M 62/81 76.5% 91/94230402 0.0% 10/81 12.3% -4587861 -89642541 +9667 chr4 + 190214555 35447391 35447390 35447665 275 GGAAGGAAAGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAAGTAAGGAGGGAAGGAAGGAAGGAAAAAGGAAGGAAGGAAGAGGAGGAGGAAGGAGGGAGGAAGGGAGGAAGGAAAGAAGGAAAGAAGGGAGGGAGGGAGAGAGGAAGGGAGGGAGGGAGAGAGGAAGGAAGGAAGGGAAAAAGGAAGGGAGGGAGGGACAGAAGGAGGGAGAGAGAGAGGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 1500702 1500701 1500970 1500702 1500701 1500970 269 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGG--GGTGATATGAGGGGAATaaaggaagga-aaatggaaaaaaaaaagaaagaa--aatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGA-AAAAACAGGAGGGAACGAAGGGGGAAAAGAA .....::.....:.:x..::........x.....:::.:..x..::.::x.:.:..:.:..:..x.:..--..x::x.x....:.:.x:.....:...-:..x...::..::......:...--..x...::x..:::::..::..:..:...:..::..........::::..::.....x...:::::::.:....x..:.:....:..:..:.::::..:...::xx..:.....:..:.-:..::x.........x.....::.:..:... 69M2D27M1D23M2D119M1D31M 169/269 62.8% 269/94230402 0.0% 6/269 2.2% 33946689 NA +9460 chr4 + 190214555 35447458 35447457 35447724 267 GGAAGGAAGGAAGAGGAGGAGGAAGGAGGGAGGA-AGGGAGGAAGGAAAGAAGGAAAGAAGGGAGGGAGGGAGAGAGGAAGGGAGGGAGGGAGAGAGGAAGGAAGGAAGGGAAAAAGGAAGGG-----AGGGAGGGACAGAAGGAGGGAGAGAGAGAGGAA-GGAAGGAAGGAAAAGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAAAGAGGGAAGGAATGAGGGAAGGAAGAAAAAGA-AGGAAGGATAGAGGGTAAGAAGGAAG chr4 + 94230402 1500702 1500701 1500971 1500702 1500701 1500971 270 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagg-----gggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG .....::.:...::.x:..:.....:..x....:-.:.......::...x.:.:....:..::.x:.:...x..x.x..:....:x:.:...::..::.x....::..:::.:....:..:x.-----..::::...x.:....:...:.:::........-..:.::..:.....x:.:...:.....-----.....:.:.:..:.:.:........:::.:::..:x:..:...:.:.:....:.-....:...xx..:..x:::..:.... 34M1I88M5I33M1I27M5D54M1I26M 169/262 64.5% 270/94230402 0.0% 13/262 5.0% 33946756 NA +9312 chr4 + 190214555 35447483 35447482 35447765 283 GAGGGAGGAAGGGAGGAAGGAAAGAAGGAAAGAAGGGAGGGAGGGAGAGAGGAAGGGAGGGAGGGAGAGAGGAAGGAAGGAAGGGAAAAAGGAAGGGAGGGAGGGACAGAAGGAGGGAGAGAGAGAGGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAAAGAGGGAAGGAATGAGGGAAGGAAGAAAAAGAAGGAAGGATAGAGGGTAAGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAATGAAGGAAAAAAGGAAG chr4 + 94230402 1500700 1500699 1500971 1500700 1500699 1500971 272 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaag-------gggaaaaaagaaaatggagaaagaagggggaaaggaagaggaag--ggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAA--ACAGGAGGGAACGAAGGGGGAAAAGAAG .:..:..::.:.:.:.:x..:::....:.:x..:....:.....:.:.:.:x.:.::.:....::.x..:..:x.:x.x..:.....x..:.:.:...:::x..:.x.:..::..::...:.:x.:::.x:....:::::.....:...::...:.::....:.-------..:.::..:.....x:.:...:...x.:..:........::...--....:::x.:.:.:x..xx:....:.....:...:.--:x....:....:.....:::...:.... 164M7D44M2D36M2D28M 166/272 61.0% 272/94230402 0.0% 11/272 4.0% 33946783 NA +3710 chr4 + 190214555 35447517 35447516 35447744 228 GGGAGGGAGGGAGAGAGGAAGGGAGGGAGGGA---GAGAGGAAGGAAGGAA-GGGAAAAAGGAAGGGAGGGAGGGACAGAAGGAGGGAGAGAGAGAGGAAG-----GAAGGAAGGAAAAGAGGGAAGGAAGG---AAGGAGGGAAG------GAAGGAAGGAAGGAAAAGAGGGAAGGAATGAGGGAAGGAAGAAAAAGA-AGGAAGGATAGAGGGTAAGAAGGAAGGAAGGAAAAGA-GGGAAGGAA chr4 + 94230402 14577288 14577287 14577535 14577288 14577287 14577535 248 GGGGATGTGAGATAAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGAGTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGACAGCTAAGGAAGGGTAAGGGTGTGAAGTGCTACAAAAGCAGCTGGAGAACTACAAAAGCACTACTGTATGCACAAAAAACACAGCTAGACAAAAGGGCTGGTAGGCAGTAATGAAAGGATGAGAAGGAA ...::x.x.:..x.:.:.:.:.:x.:......---:........::..:..-...:..xx.:...:.x:..x:...x......:.x....:..:x::..x.-----..:xx:.:...:.x..xx........---.:..x.x....------:..:.x..xx:.::..xx.x::...x.x.:xx.x.x.x.x:.....x.-..xx..:xx.:....:x:.x...x..x..x....:..-.:....... 32M3I16M1I49M5I26M3I11M6I48M1I37M1I9M 142/228 62.3% 248/94230402 0.0% 20/228 8.8% 20870229 NA +3201 chr4 + 190214555 35447683 35447682 35447812 130 GGAAGGAAGAAAAAGAAGGAAGGATAGAGGG---------TAAGAAG---GAAGGAAGGAAAAGAGGGAAGGAAGGAATGAA--------GGAAAAAAGGAAGGAAGGAAGAGGAGGAGGAAGGAGGGAGGAAGGGAGGAAGGAAAAAAG chr4 + 94230402 32265482 32265481 32265629 32265482 32265481 32265629 148 GGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGA--GAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ...x::::.:::.x.x...:..x..:...:.---------.:..:..---..:..::...:xxx:........--.....x.--------....::...:..:..::.:.......::...:...:.:.....::x.:x.::....x.:. 31M9I7M3I23M2D7M8I60M 82/128 64.1% 148/94230402 0.0% 22/128 17.2% 3182201 NA +3465 chr4 + 190214555 35447698 35447697 35447819 122 AAGGAAGGATAGAGGGTAAGAAGGAAGGAAG-------GAAAAGAGGGAAGGAAGGAATGAAGGAAAAAAGGAAG-----------GAAGGAAGAGGAGGAGGAAGGAGGGAGGAAGGGAGGAAGGAAAAAAGGAAGGAA chr4 + 94230402 32265486 32265485 32265624 32265486 32265485 32265624 139 AAGGGGGGATGCAGGG-AGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAA ....::....:x....-.:x.x...::.:..-------..::..x.x..:..::...::xx:..:..::..:.x.-----------.........::..:::.:..::.:....:.....:.........x.:x.::... 16M1D14M7I37M11I54M 78/121 64.5% 139/94230402 0.0% 19/121 15.7% 3182212 NA +3105 chr4 + 190214555 35449239 35449238 35449289 51 GTGTATATGTGTGTATGTGTGTG--TGTGTGTACATATATGTATACACACACA chr4 + 94230402 79265519 79265518 79265571 79265519 79265518 79265571 53 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCA ....:.:......:.........--...:.:......:.:..:.:.....:.. 23M2I28M 41/51 80.4% 53/94230402 0.0% 2/51 3.9% -43816280 -50414122 +3432 chr4 + 190214555 35457603 35457602 35457672 70 CTCTGTCTCAAAAAAAAATAAAGGAAGGAAGGAAGGAGAGAGAGAGAGAGAAAGAAAGAAGGAAAGAAAG chr4 + 94230402 62475705 62475704 62475774 62475705 62475704 62475774 70 CTCTCATTCAAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ....xx:......::...x...::::..::....x......:...........x....::.x:::..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -27018102 -67212300 +4189 chr4 + 190214555 35457614 35457613 35457814 201 AAAAAAATAAAGGAAGGAAGGAAGGAGAGAGAGAGAG-----AGAAAGAAAGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAAAGACAGAAAGAAAGAAAAGAAAGAAAGGAAGAAAGAAAGAAAAGAAGAAAGGAAGGAAGACAGGAAGAGAAAAGAGTGGTAAAATGA--ATTTGGAAGTAATC-----GCTCTTCCTCTATTTTTCAGAA chr4 + 94230402 49044652 49044651 49044856 49044652 49044651 49044856 205 AAAAGATTAAAG--AGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTA------AAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAATCCCTATGCGTTTCCCTCATCACTCAGAA ....:.x.....--..:..:...x:.....xx::.:.-----.......x.::x:.x:....:x.xx...x:.....:.:..:..x:.------......::.:.:.::x...:..x............::..x....x.::.x.xx:...xx.:::..x..x.......--.x.x:.x.xx....-----..x:....:::..:x:...... 12M2D23M5I46M6D76M2I14M5I22M 124/193 64.2% 205/94230402 0.0% 20/193 10.4% -13587038 -80643364 +3010 chr4 + 190214555 35457649 35457648 35457698 50 AGAGAAAGAAAGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAAAGACAGA chr4 + 94230402 58947070 58947069 58947119 58947070 58947069 58947119 50 AAAGGAAAAAAGCAGGGAGAGAAGAGAGAGTAAGAAAAGAGAAAGACAAA .:..:..:....x...:.:::......:..x.........:.......:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -23489421 -70740981 +3357 chr4 + 190214555 35457682 35457681 35457787 106 GAAAAGAAAAAGACAGAAAGAAAGAAAAGAAAGAAAGGAAGAAAGAAA---GAAAAGAAG-------------------------AAAGGAAGGAAGACAGGAAGAGAAAAGAGTGGTAAAATGAATTTGGAAG chr4 + 94230402 1500703 1500702 1500834 1500703 1500702 1500834 132 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaag--aaaatggaaatagaag ...:....:..::xx.:::.:.....:x..::.:.....:....:...---......:..-------------------------...........:.::.:..:.:......:x.--......:.xx.:.... 48M3I9M25I31M2D16M 74/104 71.2% 132/94230402 0.0% 30/104 28.8% 33956979 NA +3009 chr4 + 190214555 35469321 35469320 35469380 60 ATACCAGGGCTCTAAACACCTCTCTAAATTCCAGGCATGGGTATCAATCCACTTGCATGA chr4 + 94230402 65421554 65421553 65421613 65421554 65421553 65421613 60 ATACTATAACTTTAAAACCCACTCAAAATTCCGGTCATTGATATCAATCCAATAGCATGA ....:.x::..:....xx..x...x.......:.x...x.:..........x.x...... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -29952233 -64278169 +3013 chr4 + 190214555 35543654 35543653 35543720 67 AGTTCATTCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 69568207 69568206 69568273 69568207 69568206 69568273 67 AGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ....xx...:.....:x.::..:.::.x:...:..:.:..x:.:.xx...:................ 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -34024553 -60205849 +3090 chr4 + 190214555 35543658 35543657 35543725 68 CATTCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTTCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 84739511 84739510 84739578 84739511 84739510 84739578 68 CAATCTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTT ..x....::x..xxx::...:...:....:.x...x.:x...:..........x.x............ 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -49195853 -45034549 +3169 chr4 + 190214555 35548523 35548522 35548566 44 TAATCCTTTTCCTGTTTTTTTTTGTTTGTTTGTGTCTGTTTTTG chr4 + 94230402 64538570 64538569 64538613 64538570 64538569 64538613 44 TATTTCTTTTCCTGTTTTTTTTTGTTTGTTTATGTTTATGTTTG ..x.:..........................:...:.:.x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -28990047 -65240355 +3244 chr4 + 190214555 35623135 35623134 35623199 65 CTTTAGTTTATATGTATATAAATATGTACACACATATGCATATACATATAT---GTGTATATGTATAA chr4 + 94230402 50629528 50629527 50629595 50629528 50629527 50629595 68 CTTTAATATATACCTATATAAATATGTATACACACATGTAAATACACAAACATGGTGTTTATGAATGA .....:.x....:x..............:.....:...:.x.....:.x.:---....x....x..:. 51M3I14M 51/65 78.5% 68/94230402 0.0% 3/65 4.6% -15006393 -79224009 +3272 chr4 + 190214555 35641248 35641247 35641326 79 GTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGATTTGCTTGAACCCTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--....:.:...........::........x.xx.x..xx::.........x.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -40391953 -53838449 +3040 chr4 + 190214555 35660711 35660710 35660787 77 TTTGGTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATATATACATTCAATTAT chr4 + 94230402 85834523 85834522 85834599 85834523 85834522 85834599 77 TTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ..x...x:.x.:.x::.x.....x.................:.xx:...:x.:........:..x.:.:x::x.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -50173812 -44056590 +3137 chr4 + 190214555 35660730 35660729 35660791 62 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATATATACATTCAATTATAATT chr4 + 94230402 79265519 79265518 79265580 79265519 79265518 79265580 62 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .............::........xx...:.:.::.....::.:.::...:x...x:...x.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -43604789 -50625613 +3067 chr4 + 190214555 35681313 35681312 35681371 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -40351893 -53878509 +3076 chr4 + 190214555 35690610 35690609 35690682 73 ATAATAATTATATATATATATATATATATACACATACACACACATATTAGACAGATGTATAAACATTGGAAAT chr4 + 94230402 74671064 74671063 74671136 74671064 74671063 74671136 73 ACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAAT .:..x.....xx.:....................:.........x.xx.:.xx:::xx.x...x...::.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -38980454 -55249948 +3051 chr4 + 190214555 35690616 35690615 35690658 43 ATTATATATATATATATATATATACACATACACACACATATTA chr4 + 94230402 41650591 41650590 41650633 41650591 41650590 41650633 43 ATTAAACATATATATATATATATACACACACACACGTATCTTA ....x.:.....................:......::..x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -5959975 -88270427 +3119 chr4 + 190214555 35695764 35695763 35695835 72 GCCTTTTATAGTTTAAAAAAAAAAAGGAGGCTTTTTTATTCTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 60969133 60969132 60969204 60969133 60969132 60969204 72 GCCTTTTTTCTTTAAAAAAAAAAAAAAAAGGCTTTTTTTTTTGTCCTTTTTTTTCACTCCCTTTCTGTTTTT .......x.xx..x...........::.:.x:.....x..:.x.:::........x:.:::...:.x..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -25273369 -68957033 +3590 chr4 + 190214555 35700236 35700235 35700320 85 CACCAGTGAACTTTGA--TCAAATGCATAAAAT-ATC-CGAAATTAACCATCTCTCTCTCTTTCTGTCTCTTACACACACACACACACA chr4 + 94230402 75248000 75247999 75248088 75248000 75247999 75248088 89 CATCAGGAAGCCTCAAACTCTCAGGCACAAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:...x:.:.:.::.--..xx.x...:.....-...-.:....x..:.x.::........:...x.....:................. 16M2I15M1I3M1I51M 65/85 76.5% 89/94230402 0.0% 4/85 4.7% -39547764 -54682638 +3015 chr4 + 190214555 35727388 35727387 35727426 39 GTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTATGTGAGG chr4 + 94230402 27444628 27444627 27444666 27444628 27444627 27444666 39 GTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGTAGG ...............................x..xx... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 8282760 NA +3691 chr4 + 190214555 35736685 35736684 35736817 133 TATCAAGGGACCATTTAGAGATAATGTCAATAAAATAGAATTTTGTCACAAGATAATGATCTCCTGCTGTTACATAACCATGAACGTGAAGCCAAGTTATTTATTTTCAAAGCAGGGAAAATCAATCCCAGAA chr4 + 94230402 31852710 31852709 31852834 31852710 31852709 31852834 125 TATCAGTGCACCA----GATGAGATGTCAGTGGAATAGAAAGTCATCATAGGATAATGGTCTCCTGCTGCTACATGAAGGCCAAGGCAAAGC--AGATGTTGA--TTCAGAGTAAAGAAGTTTATTTGTAAAA .....:x.x....----..x:x:......:.::.......xx.::...:.:.......:..........:.....:.xx::x..x.::....--..x.:..x.--....:..:.::...:x.:.x.:x:.:.. 13M4D75M2D9M2D28M 83/125 66.4% 125/94230402 0.0% 8/125 6.4% 3883975 NA +4221 chr4 + 190214555 35736708 35736707 35736859 152 ATGTCAATAAAATAGAATTTTGTCACAAGATAATGATCTCCTGCTGTTACATAACCATGAACGTGAAGCC--AAGTTATTTATTTTCAAAGCAGGGAAAATCAATCCCAGAATTATGTTCTGTA-ACTGAGATTTTAGTTCTGTTA-------TACAAAATG chr4 + 94230402 51684434 51684433 51684595 51684434 51684433 51684595 162 ATGCCCTGAGAACAGAATGTTGTCACAAGACAGTCATCTCCTGTTGCTCCATAAATGTTGAGGTGAAGCCTAAGTTTATTAGTTTTTAAGGCAGAAGATATTGTTTCTGCACATTTTTACTGGATACAGTACCTTAATTTCTGTTAGTCTTAGTCCAAAATG ...:.xxx.:..:.....x...........:.:.x........:..:.x.....x::.x:.x........--.:x.....x:....:..:....:::.x..::x.:.::x.xx.x.x.x...x.-..x.x:x:..x.x........-------.x....... 70M2I52M1I21M7I9M 102/152 67.1% 162/94230402 0.0% 10/152 6.6% -15947726 -78282676 +3375 chr4 + 190214555 35789054 35789053 35789270 217 AATGCAAGAGGAGGGGAAGGGGAGGGGAGGGGAAGG-GAGGGAAAGTGAGGAGGGGAATGGAGGGGAGGAAAGAAGGGAAGGAAAGGTGGGGAGAGGGAAGAGAAGAGGGTAGGAGGAGAGGAGAACGGGAGGGGATGGGAAAGGAAAAGGGGTAGGTAGGAGGGCAGGGGAGAGAGGAGGGGAAGGGAAGGGAGGAGAGGGGAGGGGGGAGAGGAGG chr4 + 94230402 23921348 23921347 23921559 23921348 23921347 23921559 212 AGTGAAAGAGGTTGGCAGGTGCGGTGGGTAAGTGGGCGAGAGGAAGAGACGAGGGGGACAAATGTGGGGGGTGTGGGGGAGGTGTGGTGGGTGGGAGCATGTGATAGTGGAGGAAGGGGAGCTAGAGGGAGGTGGATGGGAATGTTAATGGTGTTG------AGGTATGGGTTGGAACAGATTGGAGGAACAATTGAGCCGGGAAGCGGTAGCATAGG .:..x......xx..x.:.x.x:.x..:x::.x:..-...:.:...x..x......:.:::.x.x.:..::x.x:...:...x:x......x:.::.x.x.x..x::x..x:.:...:...xx::.x..::.x.........x.xx..x..x..x.------:..:.x...xx:..:x..:xx:::....x::xx...xx....:.x..x..x:x... 36M1I119M6D56M 119/211 56.4% 212/94230402 0.0% 7/211 3.3% 11867706 NA +3726 chr4 + 190214555 35790187 35790186 35790335 149 GAAGGGGGGAGT---AGAAGGGAGGAGAGGGAAGGGGAGGATGGGGGAGAGGAGGGGAGGACAAGGGAAGGTAGGGAAGTAGAAGAGGAGAGCTGGGAGAGGAGGAAAGGAGAAGAAGAGG--GGAGGGGAGGGGGAATGAGAGGAGAGGAAGG chr4 + 94230402 48766725 48766724 48766861 48766725 48766724 48766861 137 GAAGGTGTGAGATAAAGCAGGGATGACAGGGTGAGGAAGTATG---------AGGAGCTGATAAGGAACTTCAGCGATGGAGAACAGGTCAGCGGGTAGAGAAGGAAAAGAGAAGAAAAGGCCTGAGGGGA--------AAGAAGAGAAACAGG .....x.x...x---..x.....x..x....x::..:..x...---------...:.xx..:....:.xxx:..x..x.x....x...xx...x..x....:......:........:...--x.......--------:...:....::x... 12M3I28M9D69M2I8M8D15M 95/132 72.0% 137/94230402 0.0% 22/132 16.7% -12976538 -81253864 +3105 chr4 + 190214555 35813187 35813186 35813251 65 TGTTTTTTTGGTTGTCGTTTGGTTTTTTGTTTGTGTTTTTTTTTTGGCACAGTTTTTCTCCGTAG chr4 + 94230402 90869780 90869779 90869844 90869780 90869779 90869844 65 TGTTTTTGTTGTTGTTGTTTTGTTTTTTGTCTGTTTTTTTTCCTAAACATACCTTTATTGCATAG .......x.x.....:....x.........:...x......::.x::..:.x:...x:.x.:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -55056593 -39173809 +3082 chr4 + 190214555 35819759 35819758 35819832 74 GAGAATCCATCAAAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAAAAAACTACTCATCTATTTCTCATGGCT chr4 + 94230402 72615405 72615404 72615478 72615405 72615404 72615478 74 GAAAACTAATTAAAAAAAAACAAACAAACAAAGCAAAGAGAAATAAGAAAGCTTCCCATTCACTTGTCACTGTT ..:..::x..:.........x...x...x....x...:.::..x..:...:..x.:...::.:..x...:x.:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36795646 -57434756 +3098 chr4 + 190214555 35819770 35819769 35819832 63 AAAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAAAAAACTACTCATCTATTTCTCATGGCT chr4 + 94230402 5886785 5886784 5886847 5886785 5886784 5886847 63 AAACAAAAAAAGAAAAACAAAGGGAAAAAGAAAAAACAACATTCCCATCAATTTAAAATGACT ...x.......:.....x....::............x..xx.x.:....x....xxx...:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 29932985 NA +3054 chr4 + 190214555 35825766 35825765 35825822 57 AGTTATTAATTGCTTTTTCTTCTTCTTTTTTTTTTTTTTTTTAAATTGAGACAGAGC chr4 + 94230402 29935363 29935362 29935419 29935363 29935362 29935419 57 AGTTTTAGTTTGCTTTCTCTTTTGCTTTTTTTTTTTTTTTACAAATGGAGAGAAGGC ....x.x:x.......:....:.x................x:....x....x.::.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 5890403 NA +3292 chr4 + 190214555 35826906 35826905 35826989 84 CTGCAAACAGTTTGAAGAATGGCCTAAACAAAGAATACACACACACATACATAAATATATATATATATATATATATATATATAT chr4 + 94230402 74526043 74526042 74526123 74526043 74526042 74526123 81 CTGAAAATA--TTGTAGATTGAAAAACACCAAGA-TCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ...x...:.--...x...x..:xxx.x..x....-.x..........:....:..:...:.:.x.......::.......:... 9M2D23M1D49M 61/81 75.3% 81/94230402 0.0% 3/81 3.7% -38699137 -55531265 +3082 chr4 + 190214555 35826971 35826970 35827022 52 TATATATATATATATATATACACACACACACACACACACACACACACAAGCA chr4 + 94230402 4409082 4409081 4409133 4409082 4409081 4409133 52 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCA .:..:.......................x.x.........:x:x.x.x.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 31417889 NA +3021 chr4 + 190214555 35832818 35832817 35832889 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTGGCCTGAACCTGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x..:xx:.:......::.:..x.xx:.x:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -40200388 -54030014 +3326 chr4 + 190214555 35905519 35905518 35905583 65 TTTTATTTATTTATTTATTTATTTATTTGCTTTTGTTTTTGTTTTTTGTAGAGAAGGAGTCTTTC chr4 + 94230402 22915685 22915684 22915749 22915685 22915684 22915749 65 TTTTATTTATTTATCTACTTATTTCTGTATTAATAGCTTTGTCTTTTTAAGAGAAGAAGACTTTC ..............:..:......x.x.::.xx.:x:.....:....xx.......:..x..... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 12989834 NA +3348 chr4 + 190214555 35923555 35923554 35923640 86 TAAGTTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGCACCTACGCTTATTTATTCATTCAT chr4 + 94230402 85834524 85834523 85834607 85834524 85834523 85834607 84 TGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA--TGTTTATGCACACAT .::...x.x...x:..x.....x.................:.xx:....x::...:.....:.xx...:--.:.....x..:x... 69M2D15M 60/84 71.4% 84/94230402 0.0% 2/84 2.4% -49910969 -44319433 +3202 chr4 + 190214555 35923556 35923555 35923636 81 AAGTTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGCACCTACGCTTATTTATTCAT chr4 + 94230402 21109186 21109185 21109266 21109186 21109185 21109266 81 AATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCAT ..x..::x....:........x.x....x.:..:.x.:.:...::x:.:.....:x::..:.....::.x...x..:.... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 14814370 NA +3142 chr4 + 190214555 35923559 35923558 35923639 81 TTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGCACCTACGCTTATTTATTCATTCA chr4 + 94230402 85834530 85834529 85834610 85834530 85834529 85834610 81 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ..x...x:..x.....x.................:.xx:...:x::...:....:.:x.:x:.:.:....x:.:x...x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -49910971 -44319431 +3123 chr4 + 190214555 35923573 35923572 35923636 64 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGCACCTACGCTTATTTATTCAT chr4 + 94230402 79265519 79265518 79265582 79265519 79265518 79265582 64 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .............::........xx...:....:...:.::..::.x:....xx.:x....::. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -43341946 -50888456 +3008 chr4 + 190214555 35931903 35931902 35931950 48 CTCAATTTGCTTAGGGAAAAAAAAAAAGTCAATTCTAATGTTGTCTTC chr4 + 94230402 30289677 30289676 30289724 30289677 30289676 30289724 48 CTCACTTTCCTTAAGGAAAAAAAAAAAACCACTTCTAATGTTTTTCTC ....x...x....:.............::..x..........x.::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 5642226 NA +3759 chr4 + 190214555 35934357 35934356 35934558 202 TGCCAAAAGAACTAACCTATTTG--GTGCAGGCTTATTTATAAGGTTTCTAATG--GCACGAAGC-------ACCCATTTTTCAAGTTCAGAATTGCCCAAATCAGCTCTTTCCTATGCAGGAATTTTCATTAGATTAAAAGAAAAAAAAAAGAAAAAGGGAAAAACTCAGACTCCTACTGCTTTCAAGAAGATAAAAATTTCTGTTCAAACA chr4 + 94230402 37997783 37997782 37997982 37997783 37997782 37997982 200 TACCACAAGAA--AATCTCTTTGCTGTGTGGATTCTGTTATTAGTTCCCAAGTGCTGCATAAAAATATAATAACCCAAAGTTTAAAGTGAGAACTTTCTAATTAAAATGTAAAATGCACAAAAATTTTGATTACATTAAAAAAAAAAAAAAAGAGAGAGAGAGAAA----------TAAT-CTTTTAAGAGAGAAAAGATGAATGTTTAACCA .:...x.....--..:..x....--...::.::.:xx....x..x.::.x.:..--...::..:x-------.....xxx..:..:x.x....:.x:.:..x.x.:x.x.xxxx.:::..::......x....x.......:............:.:..:..:...----------..x.-....:....:::x...:..xxx....:..x.. 11M2D10M2I29M2I9M7I94M10D4M1D32M 124/189 65.6% 200/94230402 0.0% 24/189 12.7% -2063426 -92166976 +3337 chr4 + 190214555 35973215 35973214 35973332 118 AAAGGAAGGAGGAAGGGAGG--------GAAGGAAAGGAAAGGGAAGGAAGGAAGGGGAGAGGAGGGGAGGGGAAGGGAGGGAGGAAGGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGGGGAAAGG chr4 + 94230402 1405816 1405815 1405941 1405816 1405815 1405941 126 AGAGGGGGCAAGAAGACAGGACTGCTTAGAAGGAAAGAAATGAGAAGAGATGGAGAGGTTTATGAGGACTGGGAAAGGGAAGATATGGGGAAGACATCAAAGAACAAGAAGAGGGAGGTGGAAAGG .:...::.x.:....:x...--------.........:..x.:....::.x.:..:..xxx:x::..:xx.....:..:::..x:x:..:...:x.xx......x:.::::...:...x....... 20M8I98M 72/118 61.0% 126/94230402 0.0% 8/118 6.8% 34567399 NA +3667 chr4 + 190214555 35973216 35973215 35973353 138 AAGGAAGGAGGAAGGGAGGGAAGGAAAGGAAAGGGAAGGAAGGAAGGGGAGAGGAGGGGAGGGGA---------AGGGAGGGAGGAAGGAAAGGAAGGAA----AGAAGGAAGGAAGGAAGGGGGAAAGGGAGGGAGGCAGGAAGGAAGGA chr4 + 94230402 2498505 2498504 2498653 2498505 2498504 2498653 149 AAGAGATGGAGAAGGGAACAATGGGGAGTG--GTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGA ...::.x.::.......:x:.x..::..x:--.x..x..x..x...x.x..::..x...::.x:.---------..:x.:..::.:..:..x.....::.----x:....:..:.............:.::..x:.:....:...:..x.. 30M2D33M9I26M4I47M 87/136 64.0% 149/94230402 0.0% 15/136 11.0% 33474711 NA +3153 chr4 + 190214555 36014211 36014210 36014304 94 AGTGAGACCCTATCGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGAA chr4 + 94230402 41112168 41112167 41112258 41112168 41112167 41112258 91 AGTGAG---CTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA ......---..::x.:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:..x.. 6M3D85M 62/91 68.1% 91/94230402 0.0% 3/91 3.3% -5097957 -89132445 +3421 chr4 + 190214555 36014242 36014241 36014356 115 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGAAGGAAGG--AAAG---AAAGAAA-----------GAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....:x.xxxx::..x:x..x.......:.x:::..x.--....---...:...-----------....:....x....:.x:...:..:...:...:.. 69M2I4M3I7M11I35M 80/115 69.6% 131/94230402 0.0% 16/115 13.9% -17997351 -76233051 +3423 chr4 + 190214555 36014250 36014249 36014372 123 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....:x.---x....x.x.:x.:......:x.:...x:xx:..:xxx.:...:.-----.:x.x:..:.:....x....:.x:...:..:...:...:.. 38M3I44M5I41M 80/123 65.0% 131/94230402 0.0% 8/123 6.5% -17997343 -76233059 +3274 chr4 + 190214555 36014254 36014253 36014380 127 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAGAGAAGGAAGGA-AAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....:x.---x....x.x:.x..:.....:-:.:..x.xx.:..xxx..:...:xxx:x.:x.x:..:.:....x....:.x:...:..:...:...:.. 38M3I20M1I69M 81/127 63.8% 131/94230402 0.0% 4/127 3.1% -17997339 -76233063 +3055 chr4 + 190214555 36014276 36014275 36014347 72 AGAAAGAAAGAAAGAAAGAAAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 39003022 39003021 39003093 39003022 39003021 39003093 72 AGAAAGAAAGGGAGGAGAATGGAGGGGGGGGAAGGAAAAAAAGGAAGACCGAACATAGGAAACTGTGGAAGA ..........::..:.::.x:..:.:.::.........:....:....xx...x:x.:....xx:x.:.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -2988746 -91241656 +3024 chr4 + 190214555 36014287 36014286 36014363 77 AAGAAAGAAAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 94029714 94029713 94029790 94029714 94029713 94029790 77 AGGAGTGAAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAAGAGGGA .:..:x....::..:.::..::.....x......::..:....:....:..:..x:..xx:x:x..x......::.. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% -58015427 -36214975 +18599 chr4 + 190214555 36025092 36025091 36025692 601 GATAATT-CATAGTCAAAAAGAATTATTAAATGATGAGCAGCTATTATTTTGCAATGCCATTCTGGGAGTCTTTGGGGATTTTACATTTA-CATGAGTTACACTTTAAGAAGTAAGTGGCTTAGGAATATTTTTAAA-----CTTATTAGTGAT---------AAAGAAGGAAAACAGCTATTGACAAGTGAGGATGAGCAC-CCACCATATGGATTTTAACATTTTAATTATTTTGTTCTTTTTCTTTTTAAAGCAACTCTTAGTGGTAATAATTTTTCAACTAATTAAAGACCAGCTGCTACTTAGCAAGCTGGACACCCAATTAGG-ATGTGAAACCTGCTAAACAACCTTTACTGCCAGCCAGCTAGCTGAATCACCTCCTGTCTCGTCACTGGCGTGGAATTGATTATTTTTTGT-----TTTGTTAAATGCATGTTGTTGTCACACAAACTGGATCTCCAGAATGTTTTTCTTTCAGAAGAGCTGAACAATCTGACATCCCGTTCAA-------------TCTCAATTTTTGGACGAATTTGAGAT---CTGTAGCAAGGTCCTTCGTCTATTTTTGTAAATATAATTATGGAATGGCTGTGGAGAATTACACTTTGCAGAAAGAAAAAAAAAA chr4 + 94230402 72463868 72463867 72464472 72463868 72463867 72464472 605 GATAATTTCACAGTCAAAGAGAAACATTGCACTATGTACA-TTCTCATAGCACACCTCCATTTTA----------------TTACTTTCAATATGA-----ACTTAAAAAGGAGAATTTTTTTGGAAAGTGGACAGCATTGCCTTATTAATGCTGCGTGGGAAAGAGAGGAGAAACAGCTATT-AGAAGAGAAGGTATGCATTCCACCATATGGATTTTAACGCTTTAATTATATTGTTCTCTTTCTTTTTATGGCAACTTTTAGTGATGATAATTTTTCAACTAATTAAAGACCAGCTGGTACTTAACAAGCTAGGCATCCAATTAGGAATCCAGAACCTGGTAAACAACCTTTACTGCCAGCCAGCTAGTTGAATCACCTCCT-----GTCACTGGCAGGGAAGT-----CTTTTTGTAGTTGTTTTATAAATGCATGTTTCAGTCATGTTGACTAGTTCTGCTGAATGCTGTTCTTTGAGACCAGCACGAGAACTTGACATCATGTTCACttatttttattttttttattttttGGAGCAGTCTGCAATGCCTTGTGGTGGTGTTCTTTTCTTTTCTTTTTTTTTTTAGTTTATTAACAAT--TAAAAAAACACCTTCTTCAGAAAAAGCAGTAAAA .......-..:.......:....x:...:x.:x...x:..-:.x.:..xx::..x:x.....:.:----------------....x..:.-:....-----....x..:.:.x:.:.xx:..x....x:.xxx:.:x-----.......:..x.---------.:...:.::...........-.x...x..:.:.:x...:-...................::.........x.......:..........x:......:......:.:..............................x......:......:.:..:.........-..x:::......x............................:.............-----.........:x....x.-----:.......-----...xx............x:x....:::x:...:.x...x.x.....:.x......x...xx...xx:.x..::.......x:.....x-------------.:.:.x........xx.:.:..x:..---:...:.:::x..:...:x::.x.:...x.xxx.x..:..xxxx..::::--.::.:..x:..x:.:.x......:.:x.:x.... 7M1I32M1D24M16D9M1I5M5D36M5I12M9I20M1D18M1I126M1I55M5D17M5D8M5I88M13I26M3I49M2D34M 408/566 72.1% 605/94230402 0.0% 74/566 13.1% -36438776 -57791626 +3044 chr4 + 190214555 36043850 36043849 36043898 49 GGGGAGGGGGGAGGGGAAGGGAAGGGAAAAAGGGAAAGGAAAAAGGGAG chr4 + 94230402 73633586 73633585 73633634 73633586 73633585 73633634 49 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAGG ....:....:.:...:..:............:::...::.....:.::. 49M 36/49 73.5% 49/94230402 0.0% 0/49 0.0% -37589736 -56640666 +3283 chr4 + 190214555 36136931 36136930 36136976 46 CGCACACACACACACACACACACACACATATACACGTATATATGTA chr4 + 94230402 74526077 74526076 74526122 74526077 74526076 74526122 46 CACACACACACACATGAACATACACAAATATATACGTATATATGTA .:............::x...:.....x.....:............. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -38389146 -55841256 +4019 chr4 + 190214555 36156288 36156287 36156447 160 GAAGGAAAGAAGGAAAGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------------GAAAGAAAGAAAGAAAGAGAA chr4 + 94230402 17246058 17246057 17246228 17246058 17246057 17246228 171 GAATGAAGTAACAGCAGAAG--AGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAA ...x...:x..x::x.....--..:...:...x...:..x.xx:....:x...:x:x...xx..:.x.:::.xx.......:...:...:....xx.xx.:.:.:.......:x....x.:x..:....:.::x.:xx.-------------::........x.:..x..... 20M2D117M13I21M 100/158 63.3% 171/94230402 0.0% 15/158 9.5% 18910230 NA +3673 chr4 + 190214555 36156342 36156341 36156482 141 AGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGG-GGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAA chr4 + 94230402 24562519 24562518 24562660 24562519 24562518 24562660 142 AGCAAAGGAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATATGAGACTGAAAAGCCAAAACAGAAACAAAACAGATCAAAAGAAAAAA ..x:.::..:.....x...::x:.x:x...x...-...:...............xx.::...:....:.x....:::....x:x:.:xx.x:.x:x:...xx..:..:xx..:.x.....x...:x.:xxx..:....:... 34M1I107M 86/141 61.0% 142/94230402 0.0% 1/141 0.7% 11593823 NA +3206 chr4 + 190214555 36156361 36156360 36156430 70 GGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 32089562 32089561 32089634 32089562 32089561 32089634 73 GGGTGGGAAGGGGGGGTGAAGAGAGAGAAAAAAAGAAGGGAAAAAAAGATTTAAAAAAATACCAAGAAAACAA ...x....:..:....x:..........:.:......:.:..:...::.---.:...:.x.xx......:x.. 49M3I21M 51/70 72.9% 73/94230402 0.0% 3/70 4.3% 4066799 NA +4115 chr4 + 190214555 36156372 36156371 36156515 144 AGGGGGAAAGAGAGAGAGAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAG--GAAGGAAGGAGGGAGGAA chr4 + 94230402 49044661 49044660 49044808 49044661 49044660 49044808 148 AAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGA-AGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:.:.:.....:x:.....xx.:.::x.:x-.......x.::x..x:....:x.--...x:......::.-.:..xx..........::..:.x:.:..........:.........x...:x..:..:--..::xx....:.::.... 30M1I23M2I14M1D58M2I18M 95/143 66.4% 148/94230402 0.0% 6/143 4.2% -12888289 -81342113 +3010 chr4 + 190214555 36156396 36156395 36156460 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 7141723 NA +3051 chr4 + 190214555 36156410 36156409 36156497 88 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:..:x.:...xx.x...x.........:..:..........:...x.:::xx.x::..::x..:.x.x..:.:.x..x.... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% -39085097 -55145305 +3206 chr4 + 190214555 36156418 36156417 36156505 88 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:..:x.:...xx.x...x...:.:.:....:..........:....:::.xx::......x..:.x.x.:.:::x..x.... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% -39085089 -55145313 +3188 chr4 + 190214555 36156460 36156459 36156609 150 AGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAGGGAGGAAGGAAGGAAGGAAGGAAAACAAAGATAAGCCTCTTTTTTGGAGACAGTTTTGAAGGGAAGCTAGGGTAAATACAGAAAGACAATTAAGGAAGGCA chr4 + 94230402 51728623 51728622 51728742 51728623 51728622 51728742 120 AGAGAAAAATTAAAAAGAAAAGGGAAAAAAAAAGGGGGTGGGGAGGCAGGGAAAAGGACAAAAAGTGACGTTAAC-----TAAGGCTCTCCCATGCA-------------------------AAATAGGGAAAAGCAGCTAAGCAATGCA ...:.:....x...:....:.::....:.......::.x::...:.x.....::.:.:x.::...x:.x.xx...-----....x....:::x..x.-------------------------.....x:....::..::....x..x... 75M5D17M25D28M 79/120 65.8% 120/94230402 0.0% 30/120 25.0% -15572163 -78658239 +3067 chr4 + 190214555 36161979 36161978 36162037 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -39871227 -54359175 +3683 chr4 + 190214555 36192865 36192864 36192938 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTGGAACCCAGAAGGCAAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.:..x...........x:xx:.....:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -39840339 -54390063 +3408 chr4 + 190214555 36204998 36204997 36205063 66 AAAAAAAAAAAAAAAAAAAAAAAAAAATCAAGCAAACAAAAAAATCAACAATTATTATTTCAAGAA chr4 + 94230402 66371346 66371345 66371411 66371346 66371345 66371411 66 AGGAAAAAATAGAAAGAAAATAGAAAAGCAAACAAACAAAAAAACAACCAGGAATTATTTCATGAA .::......x.:...:....x.:....x...:............:x.x..:xx.........x... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -30166348 -64064054 +3075 chr4 + 190214555 36245940 36245939 36246017 78 TTTCCCTCTCCAAATTCTCACAT-ACTTCTCTCTTTTTTTTTATCTCTCTCTTTTTTGTTTTTGTTTTTGTTTTCGACT chr4 + 94230402 27283386 27283385 27283464 27283386 27283385 27283464 79 TTTTTCTTTCAAAAGTCCTATTTCACTATTCTCCTCTTTTTTTTCTTTCTTTTTTTTGTATTTCATTTTGCTTGTTACT ...::..:..x...x..::.:x.-...x:....:.:......x...:...:........x...xx.....:..x:x... 23M1I55M 55/78 70.5% 79/94230402 0.0% 1/78 1.3% 8962554 NA +3144 chr4 + 190214555 36247342 36247341 36247395 54 CATCCCCTCCCCTCCAAAAAAAAAAAAAAAAAAGGTAAGAAAATATGTTTAATC chr4 + 94230402 90170321 90170320 90170370 90170321 90170320 90170370 50 CACCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAGCT----AAAGATCTTTAATC ..:....:....:.....................x.----...x..x....... 36M4D14M 44/50 88.0% 50/94230402 0.0% 4/50 8.0% -53922979 -40307423 +3112 chr4 + 190214555 36261444 36261443 36261544 101 TTTTATATATATATATTATATATATTATATATATATAATATATATATAATATATACATATTATATATATATATACACATACATATACATATGCAGAGTCCC chr4 + 94230402 60515076 60515075 60515176 60515076 60515075 60515176 101 TTTTATATTTAATCACATTGTACATTATTAATATTTTATTCATGTATTCTCTTTGATTCTTATATATGTGCATGTACATACATATTCATATCCACACTACC ........x..xx:.:xx.:..:.....xx....x.x..x:..:...xx.x.x.:xx.x........:.::..::..........x.....x..x.x.x.. 101M 67/101 66.3% 101/94230402 0.0% 0/101 0.0% -24253632 -69976770 +3092 chr4 + 190214555 36263693 36263692 36263758 66 GTGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAACAGAA chr4 + 94230402 32176687 32176686 32176752 32176687 32176686 32176752 66 GTGACAGAACAGAACATGGCTTTGATAAGAAAATGCAGGGAAAAAAAAAAAAAAAAAAGGACAGAA ........:..::..x:x.::.::.x..:....x:x.:::.....:....:........:...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 4087006 NA +3326 chr4 + 190214555 36266536 36266535 36266675 140 TTCAAATTTCCTTCCTTCATTCCTCCCTCCCTCCCTCCTTCCCTCCCTCC---------CTTCCTTCCTTCCTTCCCTTTCCTTCATTTCTTCCTTCCCTCTTTTTATTC-----------TTCAACCAAGTT---------CAAACCAAGCCTTTCCCAGCTACCTCC chr4 + 94230402 53764529 53764528 53764690 53764529 53764528 53764690 162 TTCAAA----CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCAGACTCTAATGGTAACTTTTTACCCAGTTTGGCATTTCCAGGCCAAGCCT---CCAGACAGCTCC ......----...:x:.:x....:.:....:.:....:............---------:::....x....::.x.....:..:xx.:.:x..x.:..:...::xx.:..-----------..:x...x....---------..::........---....x:.x.... 6M4D40M9I51M11I12M9I12M3D12M 93/133 69.9% 162/94230402 0.0% 36/133 27.1% -17497993 -76732409 +3269 chr4 + 190214555 36357608 36357607 36357671 64 AGTGG-ACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....-:...x....:.:...........::........x.xx.x...x........:.::.:.. 5M1I59M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% -39675592 -54554810 +3154 chr4 + 190214555 36373037 36373036 36373142 106 CGTAGATAAAACATATAATAGATGTACGTACAGGTAAACAAATCTAAACACATGTACATACACACACACACACACACACACACACAGAAGATCTTTCAACTTTTAT chr4 + 94230402 66743607 66743606 66743698 66743607 66743606 66743698 92 CGAAGGTAAAACAGATAGGTGCTTTA--------TAAATAGAT------ACATCTACACCCACTCAGGCACACACACACACACACAGTCAGTCTTCAGGTTTTTAT ..x..:.......x...:xx.x.x..--------....:.:..------....x....:x...x..x:...................xx::....:x:::...... 26M8D9M6D57M 67/92 72.8% 92/94230402 0.0% 14/92 15.2% -30370570 -63859832 +4155 chr4 + 190214555 36444393 36444392 36444509 117 AGAAAGAGAAA----GAGAGGCAGAGAGAGAGAAAAGAGAAAG--AAAGAGAGAAAAAAAGAGAAAAAGGAGAGAGAGGAAAGAAAAAGTGGAGAGAGAGAGAGAGTGAAAAGGGAAAAAGAG chr4 + 94230402 49044692 49044691 49044814 49044692 49044691 49044814 123 AGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .......x..:----....:...xx:..x......:.::.:..--.....:....:...:.x......x..:...:.:.......x:.:xx:::.:.xx....xx:x...:........x... 11M4I28M2I78M 81/117 69.2% 123/94230402 0.0% 6/117 5.1% -12600299 -81630103 +3567 chr4 + 190214555 36450376 36450375 36450458 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -39582821 -54647581 +3014 chr4 + 190214555 36452937 36452936 36452994 58 AATTGGAATCCCCAATATTTTTTTTCTTTTTCTTTGTTTTTTTTTCTACACAAACCTC chr4 + 94230402 28615145 28615144 28615200 28615145 28615144 28615200 56 AATTAGAA--ATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTTAAGCAAAGCTC ....:...--x:........:.....::.......x.........:..x:....x... 8M2D48M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% 7837792 NA +3096 chr4 + 190214555 36468441 36468440 36468510 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -39564756 -54665646 +3231 chr4 + 190214555 36472552 36472551 36472623 72 CCCAGCCTGGGCAACAAGAGTGAA--------GCTCCTCCTAAGAAAAAAACAAAACAAACAAACAAACAAACAAAAAAA chr4 + 94230402 37420806 37420805 37420885 37420806 37420805 37420885 80 CCCCACTTGAATGCTCAGAGTGAAACGAACTGGCTTCTCAAAAGAAAAAAAAAAAACAAATGAACAAACAAATAAAGGAA ...x:.:..::::x:x........--------...:...xx..........x........::..........:...::.. 24M8I48M 53/72 73.6% 80/94230402 0.0% 8/72 11.1% -948254 -93282148 +3479 chr4 + 190214555 36484667 36484666 36484725 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x::.........:.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -39548539 -54681863 +3140 chr4 + 190214555 36534182 36534181 36534254 73 AGAAGGAATGCCTTACCAGTTCTCTGGGTATTTCTCTTTCTCTCTCTCTCTCTCTGTATTTTATTTTATTTTT chr4 + 94230402 153433 153432 153505 153433 153432 153505 73 AGAAGAAATACCTTATCAAATGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTT .....:...:.....:..:x.x.:..xx.:x:.:xx...x...............x.x....x....:..x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 36380749 NA +3124 chr4 + 190214555 36557763 36557762 36557809 47 AAAAGGAACTAGAAAAAAAAAAAACAAACAAACAAACTCCAAAACTA chr4 + 94230402 26431522 26431521 26431568 26431522 26431521 26431568 47 AAAAAAAACCAGAAAACAAACAAACAAACAGAAAAACTCCAAAACCA ....::...:......x...x.........:.x............:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 10126241 NA +3008 chr4 + 190214555 36575322 36575321 36575402 81 CACCACACCCAGCTAATTTTTTTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 29755746 29755745 29755826 29755746 29755745 29755826 81 CACCAAGGTGAAATAATTTCCTTATGTGCATATGTGCGCGTATATATATAAATGGACATGTGTCTTTTTCTTTGTCCTATT .....x:x:x.:x......::..:....:....:.:::::..........x..:x.:..x.x.:.....:...x.::.x.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 6819576 NA +3662 chr4 + 190214555 36575338 36575337 36575407 70 TTTTTTTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 33250997 33250996 33251066 33250997 33250996 33251066 70 TTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAG .............:.:.:.......:.:........x.xx.x..x...x.....x..x.......x::.. 70M 54/70 77.1% 70/94230402 0.0% 0/70 0.0% 3324341 NA +3311 chr4 + 190214555 36593965 36593964 36594023 59 GCACCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.:.........x.xx.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -39439241 -54791161 +3014 chr4 + 190214555 36614484 36614483 36614571 88 ATATAGATATAGATATAGATATAGATACACACATATATATCTCTATATATAGATATAGATACACACATATATCTATATATAGACATAG chr4 + 94230402 86797090 86797089 86797177 86797090 86797089 86797177 88 ATGTAGAGACGGATGTAGATATAGGTGCAGATGTAGGTTTAGGTGTAGATAGATATGGATAGAGATGCACGTATGGGTATGGATACAG ..:....x.::...:.........:.:..x.::..x:.x.xxx.:..x........:....x.x.:::.::.x.:x:...:..:.:.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% -50182606 -44047796 +3257 chr4 + 190214555 36671225 36671224 36671259 35 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT chr4 + 94230402 75300458 75300457 75300492 75300458 75300457 75300492 35 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% -38629233 -55601169 +7695 chr4 + 190214555 36676200 36676199 36676552 353 TCAACATTGATCTATTTTTTTAATCCTCCATAAACCCATTATCCATATTCCTGACAAGTGAAAAGCTCTGGCATATGACTCATTTATTTGTGAAATAACTTCCTTAGTCCACGCAGATGGTGTTTGCAGAGGCTGTCATGGGGGCGGCCTGTTGGAGAAGCAGGGATTCTTAGA------------GTCACATGTGGCTATCTCACCTGTGGGGGAGAATGTGAAAATGCTATCCCTGCAAGTC------------------------AAAGCC--AAATCACAAGCCTTTTACTGTCCTTTTCTCTGGTATAACATTTAACATA---TTTTTGTGGC-CGTTTTCTTGTCTTCTCCTCTACATAGCTTTGTGTAACTGTTGTCATAGCAACAAG chr4 + 94230402 72221495 72221494 72221874 72221495 72221494 72221874 380 TTAATATTGTTTTATTTATC--ATCTGCTACAAATCTATCTTCCATGTTACAGACAAGT-AAGAGCTCTGGTACATGACTCATTTATTTCTGGAAATTTTTCTTCAGTGTATACAGATGGTGTTTATAGAGCCAACATAAGGGGTGACCTGTTCAAG-AGCAGGAGATCTACAATGTCAAAGACTTGTCATAGATATTGTTCTCTTCTGAACAGGATAA----------ATATCCTTACTAATCTGGTTCTGAGGTGTTTGTATTCATAAAGCTCGAAGACAGAGGCCATTTACTACTCTTTTGTCTGCTCTAACACATAACTCATCCTTTATGTGGAGTGTAGAATTCTCTT-TTGTCAATACTTCTTACCTCAGCTGTTGTCATGGCAACAAG .:..:....x.:.....x.:--...:x.:.:...:.:..:x.....:..x.x.......-..:........:.:...............x..:..xxx:...:.:...x:.::............::....x.x::xxx:....:.:......x:..-......::x...xx:.------------....:.x:.:x:xx....x:...x:x:...x..----------x.....:.:.x.:..------------------------.....:--..:x..x.:...x......:::.....x....x.x.....:x....x:.---...x.....x-:..xxxx..x....-.:x..x.:.:xx...xx:x:.:..........:........ 20M2D37M1D97M1D16M12I33M10D15M24I6M2I49M3I10M1I14M1D41M 228/338 67.5% 380/94230402 0.0% 57/338 16.9% -35545295 -58685107 +3237 chr4 + 190214555 36714371 36714370 36714465 95 TATATATCCTTATCATATGTATGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATA chr4 + 94230402 39131723 39131722 39131817 39131723 39131722 39131817 95 TAAATCCCATCAACCCATTCAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x..x:.x.:.x.x:..x:.x.::.x...:::::x......x...x.x........x.....::.....:..x..::..x...x:.......:. 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% -2417352 -91813050 +3096 chr4 + 190214555 36714384 36714383 36714455 72 CATATGTATGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATA chr4 + 94230402 39131746 39131745 39131817 39131746 39131745 39131817 72 CGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:.x....:.:.x......x...x.x.......:x.....::.:...x.:x:..::.:...x:.......:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -2417362 -91813040 +3379 chr4 + 190214555 36714390 36714389 36714470 81 TATGTATGTGTGTATGTGTGTGTGTGTGTGTGT--GTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.................:.--:....x.::.:::.:...xx...:..:.x...::.:.:...:.:.:.. 33M2I48M 56/81 69.1% 83/94230402 0.0% 2/81 2.5% -49120143 -45110259 +3320 chr4 + 190214555 36714394 36714393 36714476 83 TATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.:...x.................:.xx:...:x.::.::x...:..x...:..:.x...::.:.:...:.:.:.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -49120139 -45110263 +3573 chr4 + 190214555 36714398 36714397 36714480 83 TGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x:..x.....x...............:.:.xx:...:x.:x..:....:..x...:..:.x...::.:.:...:.:.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% -49120135 -45110267 +3032 chr4 + 190214555 36714399 36714398 36714468 70 GTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATAT chr4 + 94230402 70094141 70094140 70094210 70094141 70094140 70094210 70 GTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .....x:.:.......x...x...x.......:.:...:.:.xx.:.xx.x:...x........::.:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -33379742 -60850660 +3255 chr4 + 190214555 36714400 36714399 36714474 75 TGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...:.x.................:.xx....:x.::.:::.x.:..x...:..:.x...::.:.:...:.:.:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -49120141 -45110261 +3212 chr4 + 190214555 36714402 36714401 36714467 66 TATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATA chr4 + 94230402 46063300 46063299 46063365 46063300 46063299 46063365 66 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..::.....:::.....:..x.:::....x::...:..........:......:xxx.......:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -9348898 -84881504 +3630 chr4 + 190214555 36714404 36714403 36714478 75 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...................xx:...:x.::.x:....:..x...:..:.x...::.:.:...:.:.:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -49120137 -45110265 +3479 chr4 + 190214555 36714408 36714407 36714482 75 TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.............:...:.xx:...:xx:...:....:..x...:..:.x...::.:.:...:.:.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -49120133 -45110269 +3236 chr4 + 190214555 36714413 36714412 36714483 71 GTGTGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............:.........xx...x....:...:.::.:.::.:.:::.x.:....x.:.:.x:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -42551106 -51679296 +3838 chr4 + 190214555 36714416 36714415 36714492 77 TGTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATATATATATATATAG chr4 + 94230402 85834541 85834540 85834617 85834541 85834540 85834617 77 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGG .....x.....:...........:.:x..:..x::...:....:..x...:..:.x...::.:.:...:.:.:..:. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -49120125 -45110277 +3282 chr4 + 190214555 36714417 36714416 36714487 71 GTGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ..........:..::........x..:......:...:.::.:.::.:.:::.x.:....x.:.:.x:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -42551102 -51679300 +3503 chr4 + 190214555 36714418 36714417 36714491 74 TGTGTGTGTATGTGTGTGTGTGTCTATATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x...:.............x.xx..:..x::...:....:..x...:..:.x...::.:.:...:.:.:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -49120123 -45110279 +3156 chr4 + 190214555 36726161 36726160 36726210 50 TTTTTTTTTTTTTTTTTTTTTTTTGCTAAACAAGCATTTACAAAAAAAAT chr4 + 94230402 36641509 36641508 36641558 36641509 36641508 36641558 50 TTTTTTTCTTCTCATTTTTTTTTTTCTGACCAAGCACTTACACAAAAAAT .......:..:.:x..........x..:.x......:.....x....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 84652 NA +3155 chr4 + 190214555 36735971 36735970 36736040 70 AAAATTTTCTTTTTCTGTCTTTCTTTGTTTTTTTTTTTTTTGCTTGT--TGTTGTTTGTTTGTTTGTTTTGT chr4 + 94230402 62204779 62204778 62204850 62204779 62204778 62204850 72 AAAATCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTTTTGTGTGTATGTGTTTTGT .....:.....::.:......:....x..:.....:.:.::x:..:.--....x.x...x.:.x........ 47M2I23M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% -25468808 -68761594 +3068 chr4 + 190214555 36736768 36736767 36736823 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 35241768 NA +3121 chr4 + 190214555 36736770 36736769 36736823 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -53293306 -40937096 +3408 chr4 + 190214555 36736770 36736769 36736834 65 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATAAAATCAC chr4 + 94230402 1495000 1494999 1495064 1495000 1494999 1495064 65 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTAC ...x.:.........x.:......x........:.:..:...:.....x....::.x:.::.:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 35241770 NA +3290 chr4 + 190214555 36736774 36736773 36736830 57 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATAAAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:....x..........:.:..:...:.....x....:x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 35241774 NA +3060 chr4 + 190214555 36750006 36750005 36750098 93 TTCTGGGTTTATATATACGTATGCATGTTTATATATACATATGCATTGTATATGTATGAATGTGTATATATATACACCAATATGCATGTATAT chr4 + 94230402 13482013 13482012 13482105 13482013 13482012 13482105 93 TTGTGAAGTTACACACAGGTATATAGCTCCTTGCATGTATATATATTTTAAAAGCTTAAAAATATATATATGCACACCCATACACATATATAT ..x..::x...:.:.:.x....::.xx.::x.::..::....::...x..x.x.:x.:..x:.:.......::.....x...::...:..... 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% 23267993 NA +3138 chr4 + 190214555 36759509 36759508 36759568 60 TTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTAAAGAAAAGCCTTGTTTCCCATGATT chr4 + 94230402 86769284 86769283 86769343 86769284 86769283 86769343 60 TTCTTTCCTTTTTTTTTTTTTTTTTCTCTTCCTTAAAGCATAGCTGTGGTTTTAATAATT ......:.....:....:.......:.:..::......x.x...:x..x..::x..:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -50009775 -44220627 +3502 chr4 + 190214555 36762276 36762275 36762356 81 GTGGTGCACATGCCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATCACTTGAACCCTGCAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:..----....:...........::...x....x.xx.x...x...........x.x..x:xx:..:..:.. 12M4D65M 58/77 75.3% 77/94230402 0.0% 4/77 5.2% -39270925 -54959477 +3042 chr4 + 190214555 36773831 36773830 36773903 73 TGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGAAGGGGAATTGCTTGAACCAAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x....:.:...........::........xxxx.x...x::........x..:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -39259374 -54971028 +3029 chr4 + 190214555 36784349 36784348 36784438 90 GTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGAGAT chr4 + 94230402 57372025 57372024 57372114 57372025 57372024 57372114 90 GCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATAT .:.:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x...:.x.x.. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% -20587676 -73642726 +3059 chr4 + 190214555 36834499 36834498 36834576 78 TCTTACCCTTACAAGAAAGCATCCACAAAGCAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAGACGCCAAGGCAAACAG chr4 + 94230402 8147772 8147771 8147849 8147772 8147771 8147849 78 TCTCAGCTTCAAAAGAAGTATCTCACATACTGGAGAGAAAAAAAAAAAAAAAAAAGAGAAAGATATTAAGGTGTACAG ...:.x.:.:.x.....:xxx::....x.x:::.:.:.:................:.:.....::::....::x.... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 28686727 NA +3040 chr4 + 190214555 36885552 36885551 36885649 98 TTCATGAGTTTTTACATGTAACTTTGTATATGCAGAACTGTGAGTGGATTCTTTTTTCTTTTTCCTTCCAACGTTTATTTTAGATTCAGAGTGTACAT chr4 + 94230402 73961008 73961007 73961105 73961008 73961007 73961105 98 TTCTTAAGTCTAGAAATAAAACTATTTTCAGGGATATTTGTGAGGGGATTTTTTTTTTTTTTTTTTGAAATCAACTCTTTTAGGTCCAGGGTATCCAT ...x.:...:.xx.x..:x....x.x.x:.x.x.x.x:......x.....:......:.....::.xxx.x.:x:.x......:.:...:..:.x... 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% -37075456 -57154946 +3074 chr4 + 190214555 36908860 36908859 36908906 47 TTCCTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGATGGAC chr4 + 94230402 21345699 21345698 21345745 21345699 21345698 21345745 47 TTCCCACACCAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGAC ....:...x..:.........:..........:...::.:..x.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 15563161 NA +3682 chr4 + 190214555 36942044 36942043 36942194 151 ATGGGGTGTGTGTATTATATACATATTATAT-ATATATAATATAATATATATATT------------ATACATATTATATATATAATATAATATATATAATATAATATATATATTATACATATTATATATATAATATAATATATATAATATAATATATATATTA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGT-CATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATA-TACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ...x:......-:....xxx.x.....x.x.-....:..x.xx...:.xx.....------------..x:..x.:.:..:....-..:x.:....xxx.....x......:.x....:x......:...x.....xx....x.x..:...x:.....:..x.. 11M1D19M1I23M12I18M1D78M 105/149 70.5% 162/94230402 0.0% 15/149 10.1% 10621861 NA +3620 chr4 + 190214555 36942054 36942053 36942146 93 TGTATTATATACATATTATATATATATAATATAATATATATATTATACATATTATATATATAATATAATATATATAATATAATATATATATTA chr4 + 94230402 26320252 26320251 26320344 26320252 26320251 26320344 93 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:.x.:.:..::....xx..:....xxx.....x......:.x....:x......:...x.....xx....x.x..:...x:.....:..x.. 93M 65/93 69.9% 93/94230402 0.0% 0/93 0.0% 10621802 NA +3248 chr4 + 190214555 36942082 36942081 36942184 103 ATATAATATATATATTATACATATTATATATATAATATAATATATATAATATAATATATATATTATACATATTATATATATAATATAATATATATAATATAAT chr4 + 94230402 26320253 26320252 26320348 26320253 26320252 26320348 96 ATCTCACATGTATATACTACATATTATAT-------ATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ..x.x.:..:.....xx............-------...x......:......x.xxx...:.xx:xx...x.....x.x..:...x:.....:.....x.:. 29M7D67M 69/96 71.9% 96/94230402 0.0% 7/96 7.3% 10621829 NA +3017 chr4 + 190214555 36955833 36955832 36955891 59 TTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCTTTCTTTCTTTTTCTTTTTTTA chr4 + 94230402 86518997 86518996 86519055 86518997 86518996 86519055 59 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTA ......:.:.:.:::::..x....xx.:.....:..:...:...........x:..... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -49563164 -44667238 +3309 chr4 + 190214555 36960669 36960668 36960741 73 TGCGCCTGTAATCCCAGCTACCCAGGAGGCTGAGGCTGGAGAATCGCTGGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:........:::::........x.:x.x...x.:..x........:..x:xx:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -39072536 -55157866 +3107 chr4 + 190214555 36984214 36984213 36984282 69 CATGTAATCCCAGGCACTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGGTGCAG chr4 + 94230402 76033209 76033208 76033277 76033209 76033208 76033277 69 CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:.:....x:...x.::........x.xx.x...x.:..............x.xx:..x..:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -39048995 -55181407 +3157 chr4 + 190214555 36999127 36999126 36999208 82 ATGATGGCCAGTG-----CCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCTGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033191 76033190 76033277 76033191 76033190 76033277 87 ATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:xx.....-----.x....:.:...........::...:....x.xx.x...x.:........::::..x.xx:..:..:.. 13M5I69M 57/82 69.5% 87/94230402 0.0% 5/82 6.1% -39034064 -55196338 +3072 chr4 + 190214555 37037498 37037497 37037558 61 ACATATACATAGTGAATATATATATATATGTATACACACACACACACAAACACACACAATT chr4 + 94230402 74671060 74671059 74671120 74671060 74671059 74671120 61 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCT .:...:.x.x.x.::x.:...........:....................x.x.x.:.::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -37633562 -56596840 +3045 chr4 + 190214555 37077331 37077330 37077394 64 ACCTATGATGCAAAGTTTCCATTTTAAATAAAATCAAGTTATAAAGAAAAAATATTAAGGAAAT chr4 + 94230402 29268953 29268952 29269016 29268953 29268952 29269016 64 ATTTATAATGCAAAGTTTTTATTTTAAACAACATAAAAAGATAAAAAAAACACACAAACAAAAT .::...:...........::........:..x..x..:xx.....:....x.:.:x..x:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 7808378 NA +3221 chr4 + 190214555 37112425 37112424 37112484 60 AAACTTTTCAGTTTATGG-GCTGGTTTTTTTTGTTTTGTTTTGTTTTTTATTTGTTTGTTT chr4 + 94230402 75136205 75136204 75136265 75136205 75136204 75136265 61 AGATCTTTTTGTTGGTGGTGGTGGTGTTTTTTGTTTTGTTTTTCTTTTTGTTTGTTTGTTT .:.::...:x...x:...-.x....x................x:.....:........... 18M1I42M 48/60 80.0% 61/94230402 0.0% 1/60 1.7% -38023780 -56206622 +3197 chr4 + 190214555 37112436 37112435 37112495 60 TTTATGGGCTGGTTTTTTTTGTTTTGTTTTGTTTTTTATTTGTTTGTTTGTTTGTTTTTT chr4 + 94230402 54883365 54883364 54883424 54883365 54883364 54883424 60 TCTATGGTGAGGTGGCTGTTGTTTTGTTGGGTTTTTTTTTTGTTTGTTTGCTTGCTTTTT .:.....xxx...xx:.x..........xx.......x............:...:..... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -17770929 -76459473 +3225 chr4 + 190214555 37112441 37112440 37112498 58 GGGCTGGTTTTTTTTGT---TTTGTTTTGTTTTTTATTTGTTTGTTTGTTTGTTTTTTGAG chr4 + 94230402 29671926 29671925 29671986 29671926 29671925 29671986 61 GAGATATTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGG .:.x.:x..x.....:.---:........x.....x.......................:. 17M3I41M 48/58 82.8% 61/94230402 0.0% 3/58 5.2% 7440515 NA +3113 chr4 + 190214555 37168168 37168167 37168245 78 ACAGAAACAAGTAAGTAGTTTAGGAAAAAAAAAAAAAAAAAACACTAGAGTGTTACAAAAAATTGATGTCACTCTTGA chr4 + 94230402 12547853 12547852 12547930 12547853 12547852 12547930 78 ACATAAATAACTAATTACATACCAAAAAAAAAAAAAAAAAACCACTAGAAAGTTGCAGAAAGATCTTGTAGTTTTTGA ...x...:..x...x..xx.xxx:.................x.......:x...:..:...:x.xx...x::.:.... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 24620315 NA +3007 chr4 + 190214555 37186176 37186175 37186248 73 TAAATAAAAGCAAGAAACAATTATATTACATCAAGTCTTTTTGGTTTTTTGTTTGTTTGTTTGTTTTTTGTTT chr4 + 94230402 73981035 73981034 73981107 73981035 73981034 73981107 73 TAATTACAAAGAAAAAATTATTATCCTATGTCAATTCTTGCTCTGCTTTTTTTTGTTTGTTTGTTTGTTTTTT ...x..x..:x..:...:x.....x:..::....x....x:.xxx:....x...............x..x... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -36794859 -57435543 +3184 chr4 + 190214555 37186177 37186176 37186243 67 AAATAAAAGCAAGAAACAATTATAT--TACATCAAGTCTTTTTGGTTTTTTGTTTGTTTGTTTGTTTTT chr4 + 94230402 43335466 43335465 43335534 43335466 43335465 43335534 69 AAAGACAAAGAAAAAGCTGTTGTATGCTGCAGCAAGTTGTTTTTCTTTTTTGTTTGTTTGTTTGTTTTT ...x.x..:x..:..:.x:..:...--.:..x.....:x....xx........................ 25M2I42M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% -6149289 -88081113 +3054 chr4 + 190214555 37186218 37186217 37186271 54 GGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTTTTGTTTGTTTTGGTTAAAG chr4 + 94230402 83957763 83957762 83957816 83957763 83957762 83957816 54 GGTTGTTTTTTTGTTTGTTCGTTTTTGGTATTTTTGCTTTTGTTCTGATTTAAG ....x...x..........:......x..x.....x:x......:..:..x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -46771545 -47458857 +3040 chr4 + 190214555 37186219 37186218 37186258 40 GTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTTTTGTTT chr4 + 94230402 53858856 53858855 53858895 53858856 53858855 53858895 40 GTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTTTTGCCT ......................x...x..........::. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -16672637 -77557765 +3138 chr4 + 190214555 37211008 37211007 37211076 69 CTCTCTCTCTCTCTTTCTCTCTCTCTCTCCTCTCTCTCTCTCTCACACACACACACACACACATACACA chr4 + 94230402 78842452 78842451 78842520 78842452 78842451 78842520 69 CTCTCTTGCCCTCATTTTTTCTGTGCCTCCATACTTGCTTTCTCTTAGACACACAAACACACACACACA ......:x.:...x..:.:...x.x:....x:x..:x..:....x:.x.......x.......:..... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -41631444 -52598958 +3252 chr4 + 190214555 37211027 37211026 37211068 42 TCTCTCTCTCCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..::::................................ 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -38037020 -56193382 +3291 chr4 + 190214555 37211029 37211028 37211070 42 TCTCTCTCCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..::...............x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -38037018 -56193384 +3055 chr4 + 190214555 37220502 37220501 37220549 48 GAAAAAAAAAAGGTGGTTTTTTTTTTTTTTGGTGTATCTGTAAAAATG chr4 + 94230402 7819017 7819016 7819064 7819017 7819016 7819064 48 GAAAAAAAAAAGCTTTTTTTTTTTTTTTTTGACACATCTATAAAAGTG ............x.xx...............::::....:.....:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 29401485 NA +3208 chr4 + 190214555 37233582 37233581 37233625 44 AAAACAAAACAAAACAAACAAACAAAACAAAACAAAAAAACCTA chr4 + 94230402 39573995 39573994 39574038 39573995 39573994 39574038 44 AAAGTAAAACAAAACAAACAAACAAAACAACAACAAAAAACCTA ...::.........................x.xx.......... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -2340413 -91889989 +3229 chr4 + 190214555 37251139 37251138 37251221 83 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAATGCTTGAGCCTGGGAGGCAGAGGCAGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--....:.:...........::........x.xx.x...:::.....:..::.:..x:xx:...x.:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -38782058 -55448344 +3075 chr4 + 190214555 37313676 37313675 37313735 60 GATGAGTTTTTTGTTTGTTTGTTTGTTGTTTGTTTGTTTCTGAGATGGAGACTTACTCTG chr4 + 94230402 53858851 53858850 53858910 53858851 53858850 53858910 60 GGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTTTTGCCTCATATATATACTCTG .:..x..........................x...x...:..xxx::x.x.:x....... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -16545175 -77685227 +3003 chr4 + 190214555 37348642 37348641 37348694 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 14100920 NA +3036 chr4 + 190214555 37348657 37348656 37348696 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 32939575 NA +3250 chr4 + 190214555 37392063 37392062 37392143 81 CGTGGTGGAGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTGGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....x....x....:.:...........::........x:xx.x...x::..x.....::.:..x:xx:..:..:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -38641134 -55589268 +3344 chr4 + 190214555 37406760 37406759 37406838 79 GTGGCGCATACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAACCCAGGAGGCAGGGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...--.x.:..:.:...........::........x.xx.x...x:::..........:..x:xx...:..:.. 8M2D69M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -38626441 -55603961 +4039 chr4 + 190214555 37420552 37420551 37420625 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.xx.x...x.:..............x.xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -38612652 -55617750 +4065 chr4 + 190214555 37481334 37481333 37481407 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGACGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::.......xx.xx.x...x.:...........:..x.xx:.....:.. 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% -38551870 -55678532 +3225 chr4 + 190214555 37493010 37493009 37493069 60 ATATGTGTGTGTGTATGTGTGTATGTATGTATATGTGTATAGATATATATATGTATATGC chr4 + 94230402 70094147 70094146 70094206 70094147 70094146 70094206 60 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGC ..........x...x...x.........:.:...:.:x.:..x.x:...x..:....... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -32601137 -61629265 +4136 chr4 + 190214555 37530411 37530410 37530516 106 AAAGAATATAA------AAATGAGCCATGCATGGTGGCGCACGCCTGTAGTTCCAGGTACTTGTGAGGCTGAGGCACAAGAATCGCTTGAACCCAGAAGACAGAGGTTGCAG chr4 + 94230402 76033168 76033167 76033277 76033168 76033167 76033277 110 AAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x..:...------:..x.:::x..:..::....:.....--...........x......x:........x.x::x...x.:..............x:xx:..:..:.. 11M6I26M2D67M 75/104 72.1% 110/94230402 0.0% 8/104 7.7% -38502757 -55727645 +3316 chr4 + 190214555 37567642 37567641 37567688 47 CAGAATCAATCTCTC-TCTCTCTCTTTCTCTCTCACACACACACACAC chr4 + 94230402 75248038 75248037 75248085 75248038 75248037 75248085 48 CAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACAC ..:...x....::..-.........:...................... 15M1I32M 42/47 89.4% 48/94230402 0.0% 1/47 2.1% -37680396 -56550006 +3031 chr4 + 190214555 37567651 37567650 37567688 38 TCTCTCTCTCTCTCTTTCTCTCTCACACACACACACAC chr4 + 94230402 75248050 75248049 75248087 75248050 75248049 75248087 38 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC .::............:......x............... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -37680399 -56550003 +3157 chr4 + 190214555 37587829 37587828 37587911 83 CATGGTGGCACCCGCCTGTAAACCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.x..--....:x:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -38445368 -55785034 +3152 chr4 + 190214555 37596678 37596677 37596754 77 TAAAAGCTCTCTGTAAATAGACAAAACTGGGCATATA-TATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792587 24792586 24792664 24792587 24792586 24792664 78 TGAAAACAGTGTGAGAAAGAACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .:...:.xx.x..x:..x::...:..:.:xx:..:..-x...................x:........x......... 37M1I40M 56/77 72.7% 78/94230402 0.0% 1/77 1.3% 12804091 NA +3608 chr4 + 190214555 37597915 37597914 37597993 79 GTGGTGCTCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x..--....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -38435286 -55795116 +3310 chr4 + 190214555 37598249 37598248 37598354 106 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTATAGGAAGAAAATATATAGAGAAAAAATCTGCAAAGACATTACTTCAAAATAATTTGCCAAATATT chr4 + 94230402 54037026 54037025 54037124 54037026 54037025 54037124 99 TCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGAT-------GAAACAACTCCAATAATGCCCACTAAAGatt ...x:.::.....:................:x:..:...x.x::.x.:..:...x.x........:..-------..x.:x...:...x.xx:::::.:...x... 68M7D31M 66/99 66.7% 99/94230402 0.0% 7/99 7.1% -16438777 -77791625 +3004 chr4 + 190214555 37603796 37603795 37603838 43 CTGGTTGCTTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGA chr4 + 94230402 21549969 21549968 21550011 21549969 21549968 21550011 43 CTTGTTATTGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTAA ..x...::.x...........................x...:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 16053827 NA +3158 chr4 + 190214555 37603799 37603798 37603839 41 GTTGCTTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGAG chr4 + 94230402 81178911 81178910 81178951 81178911 81178910 81178951 41 GTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAG ....:.....x.......................x...:.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -43575112 -50655290 +3669 chr4 + 190214555 37605760 37605759 37605880 121 AAAGAAAGAG--AGAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAA------GAAAGAGAAAGGAAAGAAG chr4 + 94230402 51148381 51148380 51148503 51148381 51148380 51148503 123 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGA------AATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ......::..--.x.....................x....:xxx....xx:.------..x.:..x.x:..::.x:...:.:...:.........:.::..x.:------...:x.x:......:.:.. 10M2I40M6D46M6I19M 81/115 70.4% 123/94230402 0.0% 14/115 12.2% -13542621 -80687781 +3754 chr4 + 190214555 37605774 37605773 37605992 219 AGAGAG-AGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAAAGAAAGGAAGAAAGAGGAAGGAAGGGAGGGAGGGAGAGAGAGAAG-------------GAGAGAAAGA---------GGAAGGGAAGGAGAGAGGGAGGGAG--------------GAAGGAAGGGAAGAAGGAA chr4 + 94230402 1317354 1317353 1317598 1317354 1317353 1317598 245 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGA-GAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAA---------GGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGA-AGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAA ......-......:x.x.x.::xx...:.x.:.-......xxxx..:.x..x.::.x.::.xx.:..:...........---------:..........:....x.:xx...:x:...::x:....x..:xx.:....:...:.-:...:...x:x:..x.:....-------------..:..:...:---------....x....:::.....xx.:....--------------:..x:.x...:.....:.. 6M1I26M1D45M9D56M1D21M13I10M9I25M14I19M 137/208 65.9% 245/94230402 0.0% 48/208 23.1% 36288420 NA +3617 chr4 + 190214555 37605776 37605775 37605873 98 AGAGAGAGAGAAA-GAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGG chr4 + 94230402 15855381 15855380 15855479 15855381 15855380 15855479 99 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGG .:..........:-.:.x:.......xxx::.x..:xx...::.:.:.xxx...:...:...:.::..::........:.x..:......x..:..... 13M1I85M 65/98 66.3% 99/94230402 0.0% 1/98 1.0% 21750395 NA +3279 chr4 + 190214555 37605785 37605784 37605936 152 GAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAAAGAAAGGAAGAAAGAGGAAGGAAGGGAGGGAGGGAGAGAGAGA chr4 + 94230402 56107307 56107306 56107458 56107307 56107306 56107458 152 GAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGATTGAGGAA ....:..:...x.:.........x.x:x:::...x.x..x.::.:..x.x.:.:..:.:x..x:.::::...:x::::.x....x.:.xx:.x:.:xx.x..:x.x::...x.:::..:.....::x.....:....::..x..xx...::. 152M 83/152 54.6% 152/94230402 0.0% 0/152 0.0% -18501522 -75728880 +3250 chr4 + 190214555 37605798 37605797 37605872 75 AGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...-......x:..x...x:.....:.:x:.:x.x...x.x:..............:..:. 18M1I57M 54/75 72.0% 76/94230402 0.0% 1/75 1.3% -33995228 -60235174 +3425 chr4 + 190214555 37605817 37605816 37605957 141 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAAAGAAAGGAAGAAAGAGGAAGGAAGG----------GAGGGAGGGAGAGAGAGAAGGAGAGAAAGAGGAAGGGAA chr4 + 94230402 33877425 33877424 33877575 33877425 33877424 33877575 151 AAGTAAAAAAAAAAAAAAGGAATAACAATTGAAACTAACAGAAGAAAATGAATTAGGAAATATTGATAACAACATAAATAACAAAAATACCAAGGAAGAAGACAAACAGTGCAAAGGCAGGAGGGAGAAATGGAAAAAATCCAGAAAGGAA ...x..:...:...:....:..x..x:.xx....xx..x....:.:..x..:xx......x.xx..x.:x..x.x...x..x::..:x.xx.:.:.:....:----------:.:..x:....:....:.x...:.:..xxx:...:.... 102M10I39M 88/141 62.4% 151/94230402 0.0% 10/141 7.1% 3728392 NA +3091 chr4 + 190214555 37605818 37605817 37605884 67 AGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAA---------AGAGAAAGGAAAGAAGGAAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.::............:.:..:......x:x..::...---------...:..x.....:..::... 47M9I20M 50/67 74.6% 76/94230402 0.0% 9/67 13.4% -472960 -93757442 +3802 chr4 + 190214555 37605945 37605944 37606053 109 AAGAGGAAGGGAAGGAGAGAGGGAGGGAGGAAGGAAGGGAAGAAGGAAGAGAGGGTAG-----AAGAAAGGAGGAAGAGAAAGAGAAGGAAGGAGAAAGAAAGAAAAAGAAGAA chr4 + 94230402 12768619 12768618 12768730 12768619 12768618 12768730 112 AAGAAGGGGGCAAGAAGAGAAGGGGGAGGGAAGGCACAGCAAGAAGTGGAATGGATGACATTTAATGAAGGA--AACATGGTGAGAAGTCAGGAGAAAAAAAGAAAAGGAAGAA ....:.::..x...:.....:..:..::......x.x:.x.::.:.x:..:x..:.::-----..x:.....--..x.x::x......xx........:........:...... 58M5I9M2D40M 73/107 68.2% 112/94230402 0.0% 7/107 6.5% 24837326 NA +3331 chr4 + 190214555 37606065 37606064 37606223 159 GAAAAAGATGCAAGAAAGGGGA--AGGATGGAAGGCAAGAAGAAGGAGGAGGAG-GAGAAGGAGGA---------GGAGAAGGAAGGA--AGGGAGAGAGAGAAAGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGAAA chr4 + 94230402 86056223 86056222 86056395 86056223 86056222 86056395 173 GAAGGACAGGGAGTAGAGGGGATGGGGAAAGAAACCCAGAATAGGGAAGAAAAGCTATTTGGAGGTTTTTATCTTAAATAAATAAGGAGTAGGAAGCGAGAAAAAGAAAATAAAGAAGTGGAGAAAAATTAGCAGAGGATGAGAAAAAAGCAGAAATTTGGAAAAGCGAGAGA ...::.x.x.x.:x.:......--:...x:...:x.x....x.:...:..::..-x.xxx.....x---------::.x..:x.....--...:..x....:........x......:x::..:.:..xx.:x.:..:.x......:...x.::..xxx:.:....x:...:. 22M2I30M1I11M9I13M2I83M 101/159 63.5% 173/94230402 0.0% 14/159 8.8% -48450158 -45780244 +3411 chr4 + 190214555 37606068 37606067 37606250 183 AAAGATGCAAGAAAGGGGAAGGATGGAAGGCAAGAAGAAGGAGGAGGAGGAGAAGGAGGAGGAGAAGGAAGGAAGGGAGAGAGAGAAAGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGGAAA---GAAGACAAGAGAAAGAAAGA chr4 + 94230402 41404370 41404369 41404552 41404370 41404369 41404552 183 AAAGATACAGCTAAGATAAATGAC---AGGAAATTATACATAAAAATAGGAGAATTCACCGTAGAATAAAGCTAAAGCTTGTCATAAACAAAGAAAAAAATAAAAGGAACAAGAAGAAAGGTAGAAAAAGCACTGAGGTAAGAGGAGATAAGCATAAAAGGAATTTGTATCAAGGAGAAAAAAAAA ......:..:xx...:x:..x..:---...x..xx.x.x:x.::.:x.......xxx:xx.x....x:...xx.::.xxx.xx.x...x...::...:..x.......:x..........:x...:....x.xx:..:x.::....:.x..:x.x...:.:..---.x.xxx.:......:...:. 24M3D136M3I20M 109/180 60.6% 183/94230402 0.0% 6/180 3.3% -3798302 -90432100 +3761 chr4 + 190214555 37606094 37606093 37606193 100 AAGGCAAGAAGAAGGAGGAGGAGGAGAAGGAGGAGGAGAAGG-AAGGAAGGGAG--AGAGAGAAAGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAG chr4 + 94230402 15855376 15855375 15855478 15855376 15855375 15855478 103 AGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAG .::.:..::...::..:.x...x:....:..xxx...x...x-....:.::..x--.......:...:........::.......x.:::.....x....:.. 42M1I11M2I47M 69/100 69.0% 103/94230402 0.0% 3/100 3.0% 21750718 NA +3832 chr4 + 190214555 37606105 37606104 37606263 159 AAGGAGGAGGAGGAGAAGGAGGAGGAGAAGGAAGGAAGGGAGAGAGAGAAAGAAA--AGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGGAAAGAAGACAAGAGAAAGAAAGAAAGAGTGTGTAAT chr4 + 94230402 24562518 24562517 24562676 24562518 24562517 24562676 159 AAGCAAAGGAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATATGAGACTGAAAAGCCAAAACAGAAACAAAACAGA--TCAAAAGAAAAAACTAAAGTCTATGAAAT ...x.:::.:.:....x...::x..x:x:..x:..x:.:..........:.....--.....:....::.x..:..:..::.x.x:..xx:x:.x.x..:.xx:.:...xx..:.x.....x.::.x...--x...:.....:..xx....xx.:..x... 55M2I73M2D29M 97/157 61.8% 159/94230402 0.0% 4/157 2.5% 13043587 NA +3018 chr4 + 190214555 37610419 37610418 37610476 58 CTGAACCCACAGTATCTCCAAAGTATGCCTGTGTTAGGGGAAGGGGTACTGCAGGAGG chr4 + 94230402 74041481 74041480 74041538 74041481 74041480 74041538 58 CTGAAACTATGAAATCTTCATAGTATGCCTGTGTTATGGTAAGGAGCACTCTAGGTGG .....x.:.:::x....:..x...............x..x....:.:...x:...x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -36431062 -57799340 +3080 chr4 + 190214555 37612037 37612036 37612119 83 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACTCAGAAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:.........::::........x.xx.x...xx:.x.....:......x.xx:.x:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -38421160 -55809242 +3141 chr4 + 190214555 37612305 37612304 37612386 82 ATCGCTCAGCTAAAGGTTAAAAAAAAAAA---AAAAACAAAAAAAAACAAAAAACCGGGTGCAGTGGCCCACGCCTATATTCCCA chr4 + 94230402 69137501 69137500 69137585 69137501 69137500 69137585 85 ATTGTACAGGGAAAAACAAAATAACAAAACTAAAGAAGAAAAAAAAACAACAACCCATGTGCAGTGAGTCATGCCTGAATCCCCA ..:.:x...xx...:::x...x..x....---..:..x............x..x..:x........:x:..:....:x..:.... 29M3I53M 58/82 70.7% 85/94230402 0.0% 3/82 3.7% -31525196 -62705206 +3222 chr4 + 190214555 37617643 37617642 37617725 83 CATGATGACGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAATAGAATCGCTTGAACCTGGGAAGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::..::...:.--......:...........::........x.xxxx...x.:........::.:.:x:xx:.....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -38415554 -55814848 +3319 chr4 + 190214555 37618837 37618836 37618898 62 CCTCTTGATTTTTGTTTGGTTGGTTGGTCGTTTTTCTTTTCTTTTCTTTT--CTTTTCTTTTGA chr4 + 94230402 79896030 79896029 79896093 79896030 79896029 79896093 64 CCTAGTGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTGGCTTTTCATTCAA ...xx..x..x.................:.x....:....:....:....--......x..::. 50M2I12M 50/62 80.6% 64/94230402 0.0% 2/62 3.2% -42277193 -51953209 +4142 chr4 + 190214555 37631948 37631947 37632021 74 GTGCACTTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAGCCCAGGAGCTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::.......:x.xx.x...x.......:.....:....xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -38401256 -55829146 +3358 chr4 + 190214555 37633269 37633268 37633351 83 CATGGTGGCGGGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCACGACAATCGTTTGAGCCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x..:...:.........:.::........x.x:.xx..x.::....:.....:..x:xx:.....:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -38399928 -55830474 +3027 chr4 + 190214555 37633411 37633410 37633471 61 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCATGTTGAATCTGAGTTGAAAAT chr4 + 94230402 90382693 90382692 90382753 90382693 90382692 90382753 61 AAAAAAAGAAAGATGTTGAGATAAAAAAAAAGAAAGGATTTGTAGACTCTGAGTTGAAAAT .......:...:.x:xx:.:.x.........:...:.::x...x..x.............. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -52749282 -41481120 +3058 chr4 + 190214555 37690445 37690444 37690503 59 GCATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -38342761 -55887641 +3009 chr4 + 190214555 37699125 37699124 37699187 63 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAGAAAGAAAAAAAGAAAAAAGAT chr4 + 94230402 54037031 54037030 54037093 54037031 54037030 54037093 63 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGAT .::.....:................:x:..:.xx::::..x:.....x.:.:...:....... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -16337906 -77892496 +3090 chr4 + 190214555 37699125 37699124 37699192 68 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAGAAAGAAAAAAAGAAAAAAGATTTTCT chr4 + 94230402 15856713 15856712 15856780 15856713 15856712 15856780 68 AAAGAAAAAGAAAAGAAAGAAAAACGAGACAGCACTGGAGGGAAAGAAGAAAAGAAACAATATCCTTT ...:.....:....:...:.....x:::.x..x.xx::..:.......:........x..x..::.:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 21842412 NA +3252 chr4 + 190214555 37707951 37707950 37708028 78 TATATGTACATATACATATACACATGTACACATACATATATACACACTTATATGTACACATACATATATACACACTTA chr4 + 94230402 58675368 58675367 58675445 58675368 58675367 58675445 78 TATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ...x..x..x.:x.:x.x.......x.x:::..:........:.....:......:....:...:x:.x.:.:.:... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -20967417 -73262985 +3080 chr4 + 190214555 37724537 37724536 37724608 72 GTGTGTATAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:..:.:........:..::........x.xx.x...x.:.........x.:..x:xx:..:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -38308669 -55921733 +3291 chr4 + 190214555 37732466 37732465 37732538 73 TGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCACAAGAATCACTTGAACCTTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........:.::........x.x::x...x..........:x.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -38300739 -55929663 +3041 chr4 + 190214555 37737972 37737971 37738073 102 AATACATATATGTGTATATATATATACACATATATATGTGTATATATATATACACATATATATGTGTATATATATATACACATATATATGTGTATATATATT chr4 + 94230402 91734599 91734598 91734700 91734599 91734598 91734700 102 AGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTT .::.:...x..:...x.x:x...:x.xx:....x....::...:...xx...x.x.x:.x..::x:x...:...:.x.x.......:...x........x.. 102M 65/102 63.7% 102/94230402 0.0% 0/102 0.0% -53996627 -40233775 +3051 chr4 + 190214555 37737976 37737975 37738043 68 CATATATGTGTATATATATATACACATATATATGTGTATATATATATACACATATATATGTGTATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:.......:..:.:...:x:..:..:.x::.....:.x........:....:xxx:.:....:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -8325322 -85905080 +3568 chr4 + 190214555 37750156 37750155 37750282 127 ATATAGATACACACGTATACACGTCTACACGTATATATACACCTGTGTGTATATACACACATATATACATATATACATATACATATGTACACATACACACATATATACGTATATACGTATACACACA chr4 + 94230402 21109179 21109178 21109299 21109179 21109178 21109299 121 ATAAGGAAATTTGCTTATACATGT------GTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA ...x:..x.:x::.x......:..------..:.x.x.:::xx:..:.x.....::..x..:......x::.:...x.....:.......x...:.x:x::.:....:..:...:x:...:..::.. 24M6D97M 75/121 62.0% 121/94230402 0.0% 6/121 5.0% 16640977 NA +3068 chr4 + 190214555 37750214 37750213 37750270 57 ACATATATACATATATACATATACATATGTACACATACACACATATATACGTATATA chr4 + 94230402 61270779 61270778 61270835 61270779 61270778 61270835 57 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .:....x.::......::......::.:.......x....x...:....x...:.:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -23520565 -70709837 +3031 chr4 + 190214555 37750226 37750225 37750275 50 ATATACATATACATATGTACACATACACACATATATACGTATATACGTAT chr4 + 94230402 74526074 74526073 74526123 74526074 74526073 74526123 50 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ..x:...:.:...:.::.:x.........x...............:.... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -36775848 -57454554 +3644 chr4 + 190214555 37755446 37755445 37755519 74 GTGGGTGTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAGCCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x::.....:.:...........::........x.xx.x...x..:....:.....:..x:xx:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -38277758 -55952644 +3010 chr4 + 190214555 37808704 37808703 37808777 74 GTGCACCTGTAATCCCAGCTTCTTGGGAGGCTGAAGCAGGAGAATAACTTGAATGCAGGACGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:......x....::.......:x.xx.x...xx.......:x...:.xx.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -38224500 -56005902 +3156 chr4 + 190214555 37819559 37819558 37819608 50 CAAGACTCTCTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAC chr4 + 94230402 36350019 36350018 36350068 36350019 36350018 36350068 50 CATAACTTTCTATCAACATAAAAGGAAAAGAAAAAAAAAAAAACAAACAC ..x:...:........x.x....::....:.............x...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 1469540 NA +3411 chr4 + 190214555 37823303 37823302 37823371 69 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:.........::::........x:xx.x...x.............:.. 6M5D58M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% -38209898 -56020504 +3205 chr4 + 190214555 37831063 37831062 37831123 61 GTGCACCTGTAATTCCAGCTTCTTGGGAGGCTGAGACAGAAGGATTGTTTGAACCCGGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:........x....::........x.xx:x.:.x:::........:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -38202141 -56028261 +3229 chr4 + 190214555 37840908 37840907 37840986 79 TCCATACATGTATGTGATTCATACATATTCATACATGTAAGTGTGTGTGTGTGTGTGTATATATATATATATATATGTA chr4 + 94230402 32744965 32744964 32745042 32744965 32744964 32745042 78 TCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT-TCTGTAGATGCA ..:......x..::x:..x:.x.:.:..x......:::.:.....::.......:.....:.....-.x.:..x...:. 66M1D12M 54/78 69.2% 78/94230402 0.0% 1/78 1.3% 5095943 NA +3064 chr4 + 190214555 37849383 37849382 37849434 52 CTGGGGTAGATTGTTGGACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 26893337 26893336 26893388 26893337 26893336 26893388 52 CTGGGGCACAATGTGTCACCTCTTATTTCCTTTTTTTTTTTTTTTTTTGAAA ......:.x.x...xxx.......x...::....................:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 10956046 NA +3748 chr4 + 190214555 37886391 37886390 37886546 156 GAATTAGGAAGAAAGCTAGGAAGGAAGGAAGGAAAAAGAAAGAGGAAGACAAAGAAAGAGAAAGAGAAAGAGAAAAAGAAAGAAAGAAAAGAAAGAAAACAAGATATTTGGGCATAACTTAACAGACTCTATGTTATTATTATTATTATTTAGAGA chr4 + 94230402 58935721 58935720 58935861 58935721 58935720 58935861 141 GGAATGAGAAGAAAAC-----AGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA--------TTGTGCAGGAATTGAC--TCTCCTTGTTGTCCTCTTTGTTATTGAAAGA .:.x.::.......:.-----..x:.xx.........x:.........:x...x..::.::x.:..:....::...x:.x:x..:.:...:.:..:...--------...x...x:.x..:..--x...:x....:.:x.:x..:.....x.:... 16M5D78M8D16M2D31M 92/141 65.2% 141/94230402 0.0% 15/141 10.6% -21049330 -73181072 +3955 chr4 + 190214555 37892277 37892276 37892358 82 GTGGTGGCACCCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCGAGGCCATAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::........x.xx.x.:.x.......:.....:..:.:x:...::... 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% -38140924 -56089478 +3655 chr4 + 190214555 37893686 37893685 37893779 94 CATGGTGGCATGTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGACAGGAGAATCGCTTGAAGCCAGGAGGCGGAGGTTGCAGTGAAACATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGAT ..::....--..::.x......:.......:...::........x.xx.x...x.:......x....:..x:xx:..:..:..---........ 8M2D73M3D8M 65/89 73.0% 89/94230402 0.0% 5/89 5.6% -38139511 -56090891 +3822 chr4 + 190214555 37900936 37900935 37901014 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGGGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........:.........x.xx.x...x::...........::.x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -38132265 -56098137 +3025 chr4 + 190214555 37913632 37913631 37913676 45 TATATATATGTGTGTGTGTGTGTATATATATATATAGGGATATCT chr4 + 94230402 72529267 72529266 72529311 72529267 72529266 72529311 45 TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCT ....:.::...............:..:.........:..x.x... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -34615635 -59614767 +3025 chr4 + 190214555 37913632 37913631 37913676 45 TATATATATGTGTGTGTGTGTGTATATATATATATAGGGATATCT chr4 + 94230402 72525694 72525693 72525738 72525694 72525693 72525738 45 TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCT ....:.::...............:..:.........:..x.x... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -34612062 -59618340 +3484 chr4 + 190214555 37925681 37925680 37925737 57 CAAAAAAAAAAAAAAAAGAGAGAAAAAAAGAAAAATACATAATCATTGCAGACAATT chr4 + 94230402 44112715 44112714 44112771 44112715 44112714 44112771 57 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTT .................:.....:.:.:....x......:.:..x.x.x.....x.. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -6187034 -88043368 +3422 chr4 + 190214555 37925682 37925681 37925736 55 AAAAAAAAAAAAAAAAGAGAGAAAAAAAGAAAAATACATAATCAT-TGCAGACAAT chr4 + 94230402 75300458 75300457 75300513 75300458 75300457 75300513 56 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATCATCTGCAGACAGT ......................:.:.:...:....x..xx.....-........:. 45M1I10M 47/55 85.5% 56/94230402 0.0% 1/55 1.8% -37374776 -56855626 +3546 chr4 + 190214555 37933044 37933043 37933090 47 TCCATTTAAAAACAAAAAAACAAAAAAACAAAAAAAACTTATATTAG chr4 + 94230402 3396327 3396326 3396373 3396327 3396326 3396373 47 TTCGTTTAAAAACAAACAAAAAAAAAAACAAAAAAAACCTATATTAG .:.:............x...x.................:........ 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 34536717 NA +3047 chr4 + 190214555 37933444 37933443 37933488 45 ACACACACACACACACACACACACACACAGTAGAATAATAAAAAA chr4 + 94230402 24138441 24138440 24138485 24138441 24138440 24138485 45 ACAAACACACACATACACACAAACCAACAGTAGAATAAAAAAAAA ...x.........:.......x..xx............x...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 13795003 NA +4051 chr4 + 190214555 37945372 37945371 37945455 84 ACATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.........:--......:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 15M2D67M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% -38087824 -56142578 +4015 chr4 + 190214555 37950203 37950202 37950273 71 TTCTGCACCTGAATGACCCTGGGCAAATAACTTCACCTCTTTGTGCCTCATTTTCCTCATCTGTAAAATGG chr4 + 94230402 83501130 83501129 83501197 83501130 83501129 83501197 68 TTCTGTACCCA---GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGG .....:...::---...:..........x....x....x.x.........x...:.:..:........... 11M3D57M 56/68 82.4% 68/94230402 0.0% 3/68 4.4% -45550927 -48679475 +3085 chr4 + 190214555 37965057 37965056 37965134 78 CTAGGTGAGGCCTTTGGTGAATTATTTTACTTTCCTGAACCTCAGTTTCCTCATCTGCAAAACAGAATAAGTAATACC chr4 + 94230402 21140884 21140883 21140958 21140884 21140883 21140958 75 CTGGGTGG---CTTCTGAGTGTTATTTTACCTCACTGTGCCTCATTTTCCTGATCTACAAAACAGGGACATTAATGCC ..:....:---...:x.x.x:.........:.:x...x:.....x......x....:........::xx.x....:.. 8M3D67M 54/75 72.0% 75/94230402 0.0% 3/75 4.0% 16824173 NA +3421 chr4 + 190214555 37984712 37984711 37984817 106 GTGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTCCTTGAGCCTGGGAGGCAGAGGTTGTAGTGAGCCAAGATTGTGCCAC---------TGCACTTAGCCTG chr4 + 94230402 76033204 76033203 76033312 76033204 76033203 76033312 109 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ...:..x....:.:...........::........x.x:.x...x:x.....:..::.:..x:xx:..:.....------..x..x:.....x---------...x..x...... 74M6D13M9I13M 71/100 71.0% 109/94230402 0.0% 15/100 15.0% -38048492 -56181910 +3220 chr4 + 190214555 38003728 38003727 38003810 83 CATGGTGGCATGCACCTGCAGTTCCAGCTACTTGGGAGGCTGAAATGGGATAATCGCTCAAGCCTGAGAGGTTGAGGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x..:...............::.......:x:xx.xx..x.:..::.:..::::..x..x:......:. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -38029469 -56200933 +3180 chr4 + 190214555 38028131 38028130 38028185 55 AAAAAAAACAGCAAAAAAAAAAATCTCATAATGGTTTTTGTTTGTTTGTTTTTTT chr4 + 94230402 38374766 38374765 38374820 38374766 38374765 38374820 55 AATGAAAACAGCATGAAAAACAGGCTTGTGGTGGTTTTTTTTTGTTTGTTTTTTT ..x:.........x:.....x.:x..::.::........x............... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -346635 -93883767 +4036 chr4 + 190214555 38042040 38042039 38042118 79 GTGGCGCACACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCATGAGAATCACTTGAGCCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......:.........:.::........x.x..x...x.......:.....:..x.xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -37991161 -56239241 +3235 chr4 + 190214555 38052730 38052729 38052802 73 ACACACACACACACACACACACACACACACACACAGGATAACATCTGTGTTTGATCATGTACACTGCAATTTG chr4 + 94230402 24017446 24017445 24017518 24017446 24017445 24017518 73 ACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGAATAATGCTTTGAACTCCAATTTG ...:.:..............x.x:......x:.x....xx......:..xx.:..xx.x.:x...x....... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 14035284 NA +3837 chr4 + 190214555 38131114 38131113 38131243 130 TTAAGCAGAGATGATTGTGACCCAGGGTGGTTCCTAGGGATTAATGGAGGCCTGGAAGAGTTTATGGCTTTGGGTACTGCTGAGAGCCATTAACTTAACACAGAACATCAA-TCCGTAGGAAAAGCCAGAG chr4 + 94230402 89437800 89437799 89437927 89437800 89437799 89437927 128 TTAAGCAGCAATGATAA-GGCCCAGAGCTTTTTCCAGGGATTAATATTTGGCTGGAAGAGTTTATGGCTTGAAGCAAGACTGCAGGGCATTAAGGTA--GTCGGTCATCAGTTTCCCAGGAAATGCCCAAG ........x:.....x:-.:.....:.:xx..:.:..........:xxx.x...................x::.:.xx:...x::.x......xx..--::x.:x.....:-.:.x:......x...x:.. 17M1D79M2D12M1I19M 86/127 67.7% 128/94230402 0.0% 4/127 3.1% -51306686 -42923716 +3966 chr4 + 190214555 38135827 38135826 38135970 144 TGTTTGAAAAATGAAAAATATATATATATGTGTGTGTGTATATATATGTGTG----TGTGTGTGTATATATGTGTGTGTGTATATATACGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTGTATATATA chr4 + 94230402 21109169 21109168 21109301 21109169 21109168 21109301 133 TATCTGAAAAATAAGGAA---------------ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.:........:.::..---------------:.x..:x....:.......----....x.:....x...:...::x:::.....:x.....::x.:..::.:...::x::..:x.x.....:.:.......:x..:..:..::.:. 18M15D19M4I92M 83/129 64.3% 133/94230402 0.0% 19/129 14.7% 17026658 NA +3073 chr4 + 190214555 38135877 38135876 38135944 68 TGTGTGTGTGTATATATGTGTGTGTGTATATATACGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...:..:::..x..:.:...x.:....:.:.:......:....::.x...:..::.x...:.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -48498047 -45732355 +3287 chr4 + 190214555 38135892 38135891 38135957 66 ATGTGTGTGTGTATATATACGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:..:..xx.:....:..x..x::x.:x..............:.........::..:::..... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 10810401 NA +3287 chr4 + 190214555 38135895 38135894 38135960 66 TGTGTGTGTATATATACGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:..:..xx.:.....::x..x::x..x..:...........:.........::..::....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 10810403 NA +3138 chr4 + 190214555 38176855 38176854 38176924 70 AAGACTCTGTCTCAAAATAAAATAAAATAAATAAATAAATAAATAAAAATAAAAATAAAAACAAAACCAA chr4 + 94230402 73293875 73293874 73293943 73293875 73293874 73293943 69 AGGACTTTAT-GCAGATTCAAGTTCAATAAATAAATAAGTAAATAAAAATGCAAAACAGAACAAAGCCAA .:....:.:.-x..:.x.x..:.xx.............:...........:x...xx.:......:.... 10M1D59M 52/69 75.4% 69/94230402 0.0% 1/69 1.4% -35117020 -59113382 +3061 chr4 + 190214555 38204021 38204020 38204076 56 TGCTTTATCAAG----AAAAACAAAAAAACAAAAAACAAAACAAAACAAAACAAAAACCA chr4 + 94230402 71156587 71156586 71156646 71156587 71156586 71156646 60 TGCTTGTTCAGGTTAAAAAAACAAACAAACAAAACACAAAACAAAACAGAAAAAAGAACA .....xx...:.----.........x........x.............:..x...:.x.. 12M4I44M 47/56 83.9% 60/94230402 0.0% 4/56 7.1% -32952566 -61277836 +3039 chr4 + 190214555 38207072 38207071 38207128 57 CTCAAGAAACAAACAAACAAACAAACAAAACAAAACAAAACAAAACAAAACAAAAAA chr4 + 94230402 62839915 62839914 62839971 62839915 62839914 62839971 57 CTCAAAAAACAAACAAAAAAACCACCAAAACAAACAAATACAAAATACCAAAGAAAA .....:...........x....x.x.........xx..x......:.xx.x.:.... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -24632843 -69597559 +3071 chr4 + 190214555 38207075 38207074 38207132 58 AAGAAACAAACAAACAAACAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACC chr4 + 94230402 63689581 63689580 63689638 63689581 63689580 63689638 58 AATAAATAAACAGAGAAACTGCCAGAAAAAAACAAAACACAAAAAAACACAAAAAATC ..x...:.....:.x....x:x..:..x...........x..x......x......:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -25482506 -68747896 +3027 chr4 + 190214555 38208491 38208490 38208554 64 AGTCCCAGCTACTTGGGAGGCTGAGGTAAGAGGATCACTTAAGCCTGGGAGGTGGAGGCTGTAG chr4 + 94230402 76033214 76033213 76033277 76033214 76033213 76033277 64 AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...........::........x:xx.x.:.x.....:.:..::.:..x.xx:........ 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -37824723 -56405679 +3176 chr4 + 190214555 38222656 38222655 38222730 75 CTCCAAATACAGTGTGTGTGCATGTGTATATGTGCGTGTGTGCATGCGTGTGTGTGCATGCATGTGTGTATGCGT chr4 + 94230402 5214248 5214247 5214321 5214248 5214247 5214321 74 CTGCACACACA-TCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..x..x.:...-.x.::...:...::.x.:::..:.....:...x:................x:.....:::.:. 11M1D63M 51/74 68.9% 74/94230402 0.0% 1/74 1.4% 33008408 NA +3622 chr4 + 190214555 38222667 38222666 38222739 73 GTGTGTGTGCATGTGT--------ATATGTGCGTGTGTGCAT--GCGTGTGTGTGCATGCATGTGTGTATGCGTGCATATGTG chr4 + 94230402 5214232 5214231 5214314 5214232 5214231 5214314 83 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTG .......:...x....--------.:..x.:.....:.....--..:.........:::x.:......:...:....x..... 16M8I18M2I39M 58/73 79.5% 83/94230402 0.0% 10/73 13.7% 33008435 NA +3054 chr4 + 190214555 38226570 38226569 38226612 43 TTGCTGCTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTGTT chr4 + 94230402 37013834 37013833 37013875 37013834 37013833 37013875 42 TTGATTCTTTTT-TTTGTTTGTTTGTTTTGTTTTTGTTTTGTT ...x.x......-.............................. 12M1D30M 40/42 95.2% 42/94230402 0.0% 1/42 2.4% 1212736 NA +3139 chr4 + 190214555 38226576 38226575 38226617 42 CTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTGTTTTTGA chr4 + 94230402 53703198 53703197 53703239 53703198 53703197 53703239 42 CTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTCTAGAATTTGA ...............................:.x.xx..... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -15476622 -78753780 +3328 chr4 + 190214555 38248505 38248504 38248577 73 TGCACCTGTAGTCCCATCTACTTGGGAGGCTGTGGTGGGAGGATCACCTGGGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...x.......::......x.x:xx.x.:.x...:..::.....:..x.:x:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -37784700 -56445702 +3238 chr4 + 190214555 38254933 38254932 38255039 107 AGGGAAGGAAGGAGGCAGGAAGAAAGG-----------------AAAGAGGAAAGAAGGAGG---GAGAGAGGGAAGACAGAAAGAAGAAATGGAGGAAGGGAGAGAGGGAAGAAGAAAGGAAGAAA chr4 + 94230402 29130222 29130221 29130348 29130222 29130221 29130348 127 AGGTAAGGAGGAGAGGAACAAAAAAGGTGCTGCTTTATATCTTCAAAGTACATAGAACAAAGTAAGAGAGTTGGAAGAAAGTCAGAAAAACTGGAGAAAGAGAAAAAGGGGTGAAAAAAAGTGGAAA ...x.....:.:::.x.:x..:.....-----------------....x:x.x....x:.:.---.....xx......x..xx....:..x.....:...:..:.:....:x...:...:.x:.... 27M17I18M3I62M 74/107 69.2% 127/94230402 0.0% 20/107 18.7% 9124711 NA +4260 chr4 + 190214555 38254971 38254970 38255135 165 AAGGAGGGAGAGAGGGAAGACAGAAAGAAG-------AAATGGAGGAAGGGAGAGAG-----GGAAGAAGAAAGGAAGAAAGGAGGGAAGAAGGGAAGGAGAGAGAAAGGAAAGAGGGAAGGAGAGAAAGAATAAAGGAAGGGATGGAGGAAAGGAAGGAAAGAGGGAAAAAGAAAA chr4 + 94230402 32265486 32265485 32265662 32265486 32265485 32265662 177 AAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA ....:....x:x.....:x.::..:..:..-------:.:x:.x.x:....:.:...-----.....:....x.x.x.x:x:.x..:.:....::...::::....:::..::........:..::...x....:..:..x:.:.x::x::xx.:xxx....x..:.......:.:. 30M7I20M5I115M 99/165 60.0% 177/94230402 0.0% 12/165 7.3% 5989485 NA +3331 chr4 + 190214555 38255026 38255025 38255160 135 AAGAAAGGAAGAAAGGAGGGAAGAAGGGAAGGAGAGAGAAAGGAAAGAGGGAAGGAG-----AGAAAGAATAAA-GGAAGGGATGGAGGAAAGGAAGGAAAGAGGGAAAAAGAAAAATGTTTTTATCTAATAAAAGAAAAT chr4 + 94230402 57629675 57629674 57629815 57629675 57629674 57629815 141 AAGAATAGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGAGTTTGCTATCTGCTGGTAAATGAAAAT .....x:.x:..x:..x..:x......:...x:xxx.::x.xx.:....x:..xx.:-----.x...:..x...-.:..:...x.:..:..:....:..:.....:......:.:xx..:.x.:xx..::....x...... 57M5I12M1I66M 85/135 63.0% 141/94230402 0.0% 6/135 4.4% -19374649 -74855753 +3044 chr4 + 190214555 38264880 38264879 38264938 59 AGAAGAAAAAGAAGAAGAAGAAGAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTG chr4 + 94230402 311282 311281 311340 311282 311281 311340 59 AGAGGAAGAAGAAGATGACACTGAAGATGCTGATGGTGGTGGTGATTGTGTTTGCAGTG ...:...:.......x..x:xx....:..x..:...........:.x...x.x..:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 37953598 NA +3831 chr4 + 190214555 38307350 38307349 38307420 71 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCTCTTGAGCCCAGGAGTTTGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x......:...........::........x.xx.x.:.x.x.....:.....:..:..x:..:..:. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -37725856 -56504546 +3193 chr4 + 190214555 38308206 38308205 38308290 85 TTATCCCATTTTACAAAGGAGGAAACTGAGGTGCAGCAACATGAAGTTTCTTACCCTGGATTACCCAGCTGGTAAGTAATAGAGC chr4 + 94230402 51253953 51253952 51254037 51253953 51253952 51254037 85 TTATCCCATTTTCCAGAAAAGGAAACAAAGGCCTCAAGAGGTGAAGTGACTTACACAGGATCACCCAACAGGTCTACCGCAGAGC ............x..:.::.......x:...:x:x:x:.x:......xx.....x.x....:.....:.x...xx::x::..... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% -12945747 -81284655 +3189 chr4 + 190214555 38309715 38309714 38309791 77 GCTACATGAC-TTGGGCAAGTTATTTAACTTAGCTCTGCAACAATTCCTTCATCTATAAAATGGGAATCATAATAATT chr4 + 94230402 79037111 79037110 79037188 79037111 79037110 79037188 78 GCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATT ...::.....-..:..x.........x.:...x..xx.:xx........:..xx.........x.:.xx.....:... 10M1I67M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% -40727396 -53503006 +3381 chr4 + 190214555 38349723 38349722 38349789 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAACCCAAGAGGTTGAGGCTACAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x:xx.x.:.x::..........::..x..x:....::.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -37683488 -56546914 +3413 chr4 + 190214555 38357520 38357519 38357592 73 TGTACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..x......:...........::.:......x.xx.x...x::.........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -37675685 -56554717 +3053 chr4 + 190214555 38357650 38357649 38357698 49 AAAAAAACAAAAAAAAAACACCACCACCACCACCAAAAAGAATGAGGAA chr4 + 94230402 33030047 33030046 33030095 33030047 33030046 33030095 49 AAAAAGAAAAAAAAAGAAAACCACCACCACCAACAAAAACTATCAGGAA .....:.x.......:..x.............x......xx..x..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 5327603 NA +3299 chr4 + 190214555 38357653 38357652 38357743 91 AAAACAAAAAAAAAACACCACCACCACCACCAAAAAGAAT-------GAGGAAGCCGC----------CATAAACAATATGTAAAAGAATGGACACAGCTGTGTTTCA chr4 + 94230402 42575020 42575019 42575126 42575020 42575019 42575126 107 AAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCCTCTATTTTCTCATAAATATTATGCATCC-AGTAAACACAACTGTTCTTTA ..............x..................x..x..:-------:.::.....x.----------......:.x....:.xxx-.:.::.....:....x:..:. 40M7I11M10I18M1D21M 69/90 76.7% 107/94230402 0.0% 18/90 20.0% -4217367 -90013035 +3840 chr4 + 190214555 38361368 38361367 38361441 74 GTGCACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCATAAGAATCGCTTAAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.......:...::........x.x.:x...x.:...:.......:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -37671836 -56558566 +3290 chr4 + 190214555 38364166 38364165 38364248 83 AGTGGTGGTGGGCACCTGTGGTCTCAGCTACTTGGGATGCTGAGGCAGGAGAATCGCTTGAACCCAGGACGCAGAGGTTGTAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----...x...:..::..........::.x......x.xx.x...x.:...........:.xx:xx:..:..... 7M5D71M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% -37669034 -56561368 +3123 chr4 + 190214555 38364306 38364305 38364415 110 AAAAAAAAAATAAAAAATAAAAAAATAAAAAAATAAAAAAAATAAAGAAAAGAGAAAAAGAAAAAGGAAAAGAAAATAATGGTGATGTAGTAT-CATTTGAAAGACATTAG chr4 + 94230402 29445714 29445713 29445824 29445714 29445713 29445824 111 AAAAAATAAGTATATAATAACATAATAGACAAGTATAATGGCTTAAAAAAATAAAAGAAGGAAAACGGATAGAATACATTACAGCTGTAGTGTGGATAAGGGAAATATTAG ......x..:..x.x.....x.x....:.x..:..x..x::x.x..:....x.:..:...:....x.:.x....x.:.x.:xx.x......:.-x..xx.::.:.:..... 93M1I17M 72/110 65.5% 111/94230402 0.0% 1/110 0.9% 8918592 NA +3373 chr4 + 190214555 38376477 38376476 38376597 121 GCATTGTTTATG-----------------ACAGTAAAAAATT---AAAACTTGAAGACAACCAAAATGGATAAAATAGGCAGTAGGTATTATAACTTAGAAACTATCAGCACAATGAAATACCATGTAGCCATTTAAAACT chr4 + 94230402 69425711 69425710 69425843 69425711 69425710 69425843 133 GCATTTTTTATGTTCTTAGGAGGACATATACTGTAAATTATTTGGGAAACTTAATGG-----AAAACTTACAAAATGATTAGTAG---TTGACACTTAGAAAATAACAGCACAACAAAATTCCATGTAATCATTTAACATT .....x......-----------------..x.....xx...---:......:.x.:-----....:xx.:.....::x:.....---..:xx.........x..x........::....x.......::.......x.:. 12M17I13M3I12M5D23M3D53M 85/113 75.2% 133/94230402 0.0% 28/113 24.8% -31049234 -63181168 +3118 chr4 + 190214555 38386325 38386324 38386381 57 GGAGGGAGG--GGAGGAGGAGGAATAGGAAGAAGAAAAGAAAGGAAAGAAGGAA--GGAAG chr4 + 94230402 93358912 93358911 93358972 93358912 93358911 93358972 61 GGAGAAAGGCAGGAGGAGGAAGAGCTGGAGGAAGAAAAGAAAGGAAAGATGTAAATGGAAG ....::...--.........:..::x...:...................x.x..--..... 9M2I43M2I5M 48/57 84.2% 61/94230402 0.0% 4/57 7.0% -54972587 -39257815 +3891 chr4 + 190214555 38386801 38386800 38386878 78 GACTGTGGCCAAGTTACTTCACCTCTCTGAGCCTCAGTTTCCCCATCTGTAAAATGAGGGCAGTGATAGCACCTGCCT chr4 + 94230402 83501141 83501140 83501215 83501141 83501140 83501215 75 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAG---CTGATAGTAATTACCT ....x...x...:......x....x.x..x..........:....:..........::.---x......:.x:.:... 59M3D16M 59/75 78.7% 75/94230402 0.0% 3/75 4.0% -45114340 -49116062 +3096 chr4 + 190214555 38403232 38403231 38403305 74 TGTGTGTGTGTGTGCATGCGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATATATAGACAGC chr4 + 94230402 27325492 27325491 27325565 27325492 27325491 27325565 74 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGC ..:..:..xx...::.::.x::x.:x.:x:.:...........:.........:::....:....:x.:..... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 11077740 NA +3001 chr4 + 190214555 38403234 38403233 38403301 68 TGTGTGTGTGTGCATGCGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATATATAGA chr4 + 94230402 27325492 27325491 27325559 27325492 27325491 27325559 68 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAA ..:..:..xx..:..:.:.x.:x::x.:x:.:...........:..........:::........::. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 11077742 NA +4169 chr4 + 190214555 38404556 38404555 38404724 169 GGCTTTTCTTTTTCAAGATAGTTTTGGCTGCCCTACATCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTT---TTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTCCT chr4 + 94230402 50176244 50176243 50176414 50176244 50176243 50176414 171 GGTTTGTTTCTGGCAAGATGGATTTT-CTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ..:..x.:.:.xx......:.x...x-...:.::..xx.:....:.:.:...:..x:::x.::x...::x:x:.x........x.:::.:x.x...x..:..x:.........:....:---x:.:x:..::.:x.:.....x:..:..:::.:........:::.x:..:. 26M1D92M3I50M 98/168 58.3% 171/94230402 0.0% 4/168 2.4% -11771688 -82458714 +3061 chr4 + 190214555 38404609 38404608 38404674 66 TTCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTT chr4 + 94230402 45957265 45957264 45957330 45957265 45957264 45957330 66 TTTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTT ..::...:..:.:.:.:......::x:...x..x..x:........x:::.....x.......:.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -7552656 -86677746 +3143 chr4 + 190214555 38404638 38404637 38404725 88 TTTCTCTCT---TTTTCT--------TTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTCCTT chr4 + 94230402 49829809 49829808 49829907 49829809 49829808 49829907 99 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT .........---......--------...:x.::.::x.xx::.x.....x:.:x..........:...:.....:..::...:..:.:.:.:....:. 9M3I6M8I73M 61/88 69.3% 99/94230402 0.0% 11/88 12.5% -11425171 -82805231 +3658 chr4 + 190214555 38404660 38404659 38404786 127 CTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTC-----CTTTTTTTCT---------------------TTCTTTCTCTCTTTTTTCTTCCTTATTTTTCTTTCTTTCTTCTTTTTTTGAAGA chr4 + 94230402 49829850 49829849 49830002 49829850 49829849 49830002 153 CTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGGGCACAAAAACGATCCTCCCTTTCATTTCAGTGCATTTTTCCATTTTCTGTAGGCTTTTTTCCATGA ...x...:.x:.:x.....:.....:...................:.:.:::...:...x.x.-----....x...:.---------------------.:..::..:..x...:xx.x.x..x..::x:.....x.xxx.......:x.x.. 63M5I10M21I54M 87/127 68.5% 153/94230402 0.0% 26/127 20.5% -11425190 -82805212 +3166 chr4 + 190214555 38408816 38408815 38408882 67 TCTTTTTAAAAAAAGAGAGAAAGAGGAAGGATGAAAGGAAGGGAAGAAGGGAGGAAAGAAAGGAGGG chr4 + 94230402 11555963 11555962 11556029 11555963 11555962 11556029 67 TTTTTTTAAAAAAAGGGGGAAAAATCGAAGGCGAAAAAAAGGGAAGAAAGGGTGGGGAAGGAGAAGG .:.............:.:....:.xx:.:.::....::..........:..:x.::::.:::..:.. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 26852853 NA +3105 chr4 + 190214555 38408828 38408827 38408918 91 AAGAGAGAAAGAGGAAGGATGAAAGGAAGGGAAG---------AAGGGAGGAAAGAAAGGAGGGAGGAAGAAAAGGAGGGAGGGAGGAAAGAGAAAGAGA chr4 + 94230402 32265524 32265523 32265623 32265524 32265523 32265623 100 AGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGA .:...x.x:..:..::.:::xx::......::.:---------.:x...:.:......:...:.::..:..:.:.......:.:......:x:.x..... 34M9I57M 57/91 62.6% 100/94230402 0.0% 9/91 9.9% 6143304 NA +3136 chr4 + 190214555 38411872 38411871 38411959 88 CACACACACACACACACACACACACACAAACAAACAAACAAACAAAAAAAACCTCTTTAACTTATAA----GGTCATAACGTAGATTCCAGG chr4 + 94230402 37264711 37264710 37264802 37264711 37264710 37264802 92 CATATGCACACACAAACACACACACAAAAACAAACAAAACCACAGAACAATTCATTTTATATTGCAGTTGCAGCCATAAGTTATATTGTAAG ..:.::........x...........x...........xxx...:..x..x:.x:....xx..::.:----:.:.....xx..x...x:.:. 67M4I21M 61/88 69.3% 92/94230402 0.0% 4/88 4.5% 1147161 NA +3259 chr4 + 190214555 38465569 38465568 38465643 75 ACAGCATGGGCTACAGAGGGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAGAGAGAGAAAGAAAGAA chr4 + 94230402 13073547 13073546 13073621 13073547 13073546 13073621 75 ATAAAATAGGTTGCTTAGGGCAACTTTGTGTTTTTAAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGA .:.:x..:..:.:.xx....x:...:...x.:xxx...............xx..:.............:.:.::. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 25392022 NA +3197 chr4 + 190214555 38465592 38465591 38465649 58 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAG chr4 + 94230402 76607305 76607304 76607362 76607305 76607304 76607362 58 CTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAAG .....:........x....x.:.......:......:...:::::xx:......:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -38141713 -56088689 +3313 chr4 + 190214555 38465600 38465599 38465673 74 CAAAAAAAAAAAAAAAAAAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---------AGAAAGAAAG chr4 + 94230402 46677672 46677671 46677754 46677672 46677671 46677754 83 CAGTAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAAAGAAAG ..:x...................:..........x..x.xx.x:::.:.:..xx.:...x....---------.......... 64M9I10M 57/74 77.0% 83/94230402 0.0% 9/74 12.2% -8212072 -86018330 +3186 chr4 + 190214555 38465600 38465599 38465636 37 CAAAAAAAAAAAAAAAAAAAAGAAAGAGAGAGAGAAA chr4 + 94230402 75300455 75300454 75300491 75300455 75300454 75300491 37 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...................:...:............. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -36834855 -57395547 +3245 chr4 + 190214555 38490940 38490939 38490977 38 CTCTCCCTTTCTCTCTCTCACACATGCACACACACAAA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA .....:..:...............:............. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 25889636 NA +3124 chr4 + 190214555 38494428 38494427 38494496 69 AACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGAAAAAGAAACACATCCT chr4 + 94230402 18047932 18047931 18048000 18047932 18047931 18048000 69 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCT ......:...xx..::x...:............x........xx:...:x::x....:..:..:..x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 20446496 NA +3622 chr4 + 190214555 38497801 38497800 38497885 85 GGGAAGCAAAGAAAAATGGGGAGAAGGAAGGAAGGGAGGGAGGGAAGGAGGGAGGGAAGAAGGGAGGGAGGAAGGGAGGAAGGGA chr4 + 94230402 1500701 1500700 1500785 1500701 1500700 1500785 85 GGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGA ......x:......::.....:....:.:x..:....:.....:..::.:x::.::...:..::.x:.:..:x.:x.x..:.... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 36997100 NA +3222 chr4 + 190214555 38512428 38512427 38512481 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x..........::.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -37520783 -56709619 +3034 chr4 + 190214555 38524571 38524570 38524642 72 GTGCCTGTAATCCCAGCTACTCAAAAGGCTGAGGCAGGAGAATCGCTTGACTCCAGGAGGCGGTGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........::..........x.xx.x...x.:.....x:....:..x:xxx..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -37508635 -56721767 +3218 chr4 + 190214555 38527031 38527030 38527100 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:...........::........x.xx.x...xx:.x...:...:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -37506166 -56724236 +4218 chr4 + 190214555 38530930 38530929 38531022 93 CATGGTGGTGCATGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTAGAGGCTGCAGTGAGTATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA--GAACATGAT ..::........:.--..:...:...........::........x.xx.x.:.x.......:.....:..:.xx:.....:.--..::..... 14M2D66M2D9M 67/89 75.3% 89/94230402 0.0% 4/89 4.5% -37502267 -56728135 +3060 chr4 + 190214555 38580609 38580608 38580680 72 GCACCTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGAATGACGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::...:....x.xx.x...xx..x.......:.:..x.xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -37452597 -56777805 +3082 chr4 + 190214555 38580738 38580737 38580807 70 AAAAAAAAAAAAAAAAAAAGAAAGAAAAGGAGGCACTCACTCTCAGGGTCGTACCAATGCAGATCAGCAC chr4 + 94230402 46134786 46134785 46134855 46134786 46134785 46134855 70 AGGAGAAAAAAAAAAAAAAGAAAGGGATGGCGTGATGCACACTCATGGTGGCACTTGTGCAAATCTGTAC .::.:...................::.x..x.xx.:x...x....x...x.:..:x:....:...x.:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -7554048 -86676354 +3096 chr4 + 190214555 38608844 38608843 38608913 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -37424353 -56806049 +3233 chr4 + 190214555 38617639 38617638 38617707 69 CTCTCTTTCTCTCTCTGTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA chr4 + 94230402 4618339 4618338 4618407 4618339 4618338 4618407 69 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ..x.:.....:...:xxx.::.:.......x:..............x:..x.x:......x.x...... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 33999300 NA +3939 chr4 + 190214555 38619863 38619862 38619948 86 TTTTATGTGTAGCCCAATACAATTCTTCTTCTTCCAATGTGGCCTAGGGAAGCCAAAATGTTGGACATCCCTGGAATAGAGCAATC chr4 + 94230402 84344474 84344473 84344559 84344474 84344473 84344559 86 TCTTAGATGCAGCCCTAGGTAATTCCTATTCACTCATTGTGGCTCAGGGAAGACAGAAGGTTGGATAGTCCTGAATTCAAGCAATC .:...x:..:.....x.x::.....:.x...x::..x......::.......x..:..x......:.x:....:.x.x:....... 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% -45724611 -48505791 +3126 chr4 + 190214555 38620860 38620859 38620968 109 ATATGTATATATCTATACATACACATGCATATGTATATATCTATATGTATACATGCATATCTATGTACACACACATATGTGTATGTATGTATATGCATGTGTGTGTATG chr4 + 94230402 21109195 21109194 21109303 21109195 21109194 21109303 109 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...::.:.:.:...x.:::x:.::..x:.......:x:.:x....:x::.::.:x:...:x.......x..::.x.x.......:.:.....:x::...::..:::.:. 109M 61/109 56.0% 109/94230402 0.0% 0/109 0.0% 17511665 NA +3576 chr4 + 190214555 38624098 38624097 38624180 83 CGTGGTGGCGCACACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:....:--....:.:.........:..:........x.xx.x...x..........::.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -37409099 -56821303 +3109 chr4 + 190214555 38625287 38625286 38625364 78 AAAAAAAAAAAAAAAAAAAGCAAATATATATACATATATATATATATATATATATATATATATATATATAGAGAGAGA chr4 + 94230402 59240418 59240417 59240495 59240418 59240417 59240495 78 AACAAAAAAGACAGCAAGAGCATACATATATCCAGATATATATATCTATAAGTACAGGCATATACAGTGGTAGAGAAA ..x......:.x.:x..:....x.:......x..x..........x....x:..:.x::.....:.xxx:x.....:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -20615131 -73615271 +3587 chr4 + 190214555 38628583 38628582 38628643 61 GTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCACGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:...........::........x.xx.x...x............x:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -37404621 -56825781 +3748 chr4 + 190214555 38644351 38644350 38644429 79 GTGGCGCATGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGACAGGGGTATCACTTGAGGCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--......:.........:..:........x.xx.x.x.x.......:x....:..x.:x:.....:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -37388850 -56841552 +3854 chr4 + 190214555 38645386 38645385 38645469 84 ACATGGTGGTGTGCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGCGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::......--...x....:.............::........x.xx.x...x.:........::.:..x.xxx..:..:.. 11M2D71M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% -37387810 -56842592 +3630 chr4 + 190214555 38649593 38649592 38649689 97 GTGGCACATGCCTGTAGTCCCAACTATTTGAGAGGCTGAGGCAGGAGAATCACTTAAACCCAAGAGGCAGAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....::..:.--......:...:...:....:........x.xx.x...x.....:......::..x:xx:..:..:..------..x...:..... 10M2D67M6D12M 65/89 73.0% 89/94230402 0.0% 8/89 9.0% -37383608 -56846794 +3225 chr4 + 190214555 38650893 38650892 38650948 56 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAG chr4 + 94230402 76033206 76033205 76033261 76033206 76033205 76033261 56 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ....x....:.:...........::........x.xx.x...xx:........... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -37382313 -56848089 +3377 chr4 + 190214555 38657018 38657017 38657103 86 AAGGGTGGCACACA--------CCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCCAGGAGGCAGAGGTTGTTGCAC chr4 + 94230402 76033187 76033186 76033280 76033187 76033186 76033280 94 AAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC ....:..::.....--------.x.:..:.:...........::........x.xx.x...x.:..x........:..x:xx:..:...x.x.. 14M8I72M 61/86 70.9% 94/94230402 0.0% 8/86 9.3% -37376169 -56854233 +3322 chr4 + 190214555 38684507 38684506 38684579 73 GTTTTGTGGAGGTTTTTTTGTTTTGGTTTTTTGTGTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTTGGTTTTG chr4 + 94230402 12151621 12151620 12151689 12151621 12151620 12151689 69 GTTTTGGGGTGGGTTTTTTGTTTTGG--TTTGGTTTTGTTTTTTGTTTGTTTTTTGG--GGGTTTTTGTTCTG ......x..x..x.............--...x..x..x......x...x........--x......x...:.. 26M2D29M2D14M 58/69 84.1% 69/94230402 0.0% 4/69 5.8% 26532886 NA +3792 chr4 + 190214555 38693047 38693046 38693150 104 TTTGCACATATATATATAT----------GTATATATATACACATATATATACACGTATATATATATGTACATATATATACATATATATATACGTGTATATATATGTGTATATA chr4 + 94230402 21109188 21109187 21109301 21109188 21109187 21109301 114 TTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .....x:...:..:.:.:.----------....x.....::..x:.:......x...:..:x....:...::..:x:..:.x.x.:.:....:......:x.....::.::.:. 19M10I85M 69/104 66.3% 114/94230402 0.0% 10/104 9.6% 17583859 NA +3102 chr4 + 190214555 38693090 38693089 38693166 77 ACGTATATATATATGTACATATATATACATATATATATACGTGTATATATATGTGTATATATATACATATATATAAT chr4 + 94230402 22600198 22600197 22600274 22600198 22600197 22600274 77 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGAT ..::.:....x:.::.:..x.:.:..:....:.x.x...:..:...x.:.:.........::..:..::..x:.:.. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% 16092892 NA +3110 chr4 + 190214555 38699214 38699213 38699268 55 CCTAATTGGGCTGTTTTTTTGTTTTGTTTTGTTTTTCAGCTAAAGGCAAAGATAA chr4 + 94230402 17786334 17786333 17786388 17786334 17786333 17786388 55 CCAAATATGACTGTGTTTTTGTTTTGTTTTGTTTTTAAGAAAAAGGAAAAGAAAA ..x...xx.:....x.....................x..xx.....x.....x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 20912880 NA +4275 chr4 + 190214555 38706307 38706306 38706459 153 AGCATGTAACCATTATCATTTTCTTTTTACAGATGGAAATTGGGGCACAGACAGATTAAGTAATTTACCCAAGGTCACAAAGATAGGAAGCGGGAGAACCAGCTTCAAATTCAGGCCTCCTATGTCCAGAACCTGCTGTCTTAACTATTATAT chr4 + 94230402 82283111 82283110 82283238 82283111 82283110 82283238 128 AGCATTGTATTATAATCATTTCAT----ACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTA------GTGAGGAC--------AATTCAG-------AAGTCCCCAGTCTCCTGCTCTAACTGCTATAT .....xxx.::..x.......:x.----...x:x.....:....:.....:..........:.:.x...:.........x..x..------.x...:..--------.......-------.x....xx.::..x...:::.....::..... 24M4D57M6D8M8D7M7D32M 95/128 74.2% 128/94230402 0.0% 25/128 19.5% -43576804 -50653598 +3473 chr4 + 190214555 38706706 38706705 38706842 137 AAATAAGAGGTTTGAGATATACAAATACATATACTT----------GTATATATGTATACATACATATACTTGTCTATATATGTATCTCTATGTATGCGTACATA--TATACGTATATATGTACGCGTACATATATATATGGGATTACA chr4 + 94230402 21109177 21109176 21109311 21109177 21109176 21109311 135 AAATAAG------GAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCG--------TGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA .......------..:..x.:.xx......:.::x.----------....x...:.:...x:.........:.--------....:..x..:.....:::x...:--.x.::......:....:.x:..:::..::.:.:.:....... 7M6D23M10I27M8D24M2I42M 85/123 69.1% 135/94230402 0.0% 26/123 21.1% 17597529 NA +3169 chr4 + 190214555 38732116 38732115 38732182 67 TGTGGTCCCCGCTACTTGAGAGGCTGAGGTATGAAGATCATTTGAACCCATGAGTTTGCAGCTACAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..:..x.........:........x:x..x::.x..:.........x:..:..xx:...::.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -37301095 -56929307 +3495 chr4 + 190214555 38761478 38761477 38761556 79 GTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACACGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--......:...........::.:......x.xx.x...x.:.......x.:.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -37271723 -56958679 +3548 chr4 + 190214555 38764795 38764794 38764855 61 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:...........::........x.xx.x...x.:........::.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -37268409 -56961993 +5287 chr4 + 190214555 38769291 38769290 38769423 133 GGCTGCTGTTACAGCATTCAGCCTGGGTATGCTCACTTCCGCATCAATGTCATGATTCAGAACAGTGGGTC-TTTGTTGAAATCTGAAATTTCTTGGG-TAAAAGTATATCATCA-GGTTTGTATGAGGCTAGGTG chr4 + 94230402 71291523 71291522 71291658 71291523 71291522 71291658 136 GGCTTCCGTTATAAGATGAGGTCTGTGTACGCTCACTTCCCAATCAATGTAGTCATACAGGATAACGGCTCACTTGTGGAAATCCGAAACTTTTTGGGAGAGAAGTACATTCGCAGGGTGCGCATGAGGCCAGGTG ....x.:....:.:x..xx:.:...x...:..........xx........x:.x..x...:.:.::..x..-:....x......:....:..:.....-x.:.....:..:xx..-...x:.:.......:..... 71M1I26M1I16M1I20M 96/133 72.2% 136/94230402 0.0% 3/133 2.3% -32522232 -61708170 +3547 chr4 + 190214555 38823669 38823668 38823739 71 GTTTTGCCTCCTTTTCGCTTTTTTGTTTTTCTTTGTTTTTTGTTTTAGGTCTTTCTGGATCAATTTTTCAA chr4 + 94230402 17156525 17156524 17156595 17156525 17156524 17156595 71 GCTTTGTGTTCTTCTGGCTTCTGTGTTTTTTTCTGTGTTCTGTATTATGTTTTTATAGATCAATTTCTAAA .:....:x.:...:.x....:.x.......:.:...x..:...x...x..:...x.:.........:.x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 21667144 NA +3697 chr4 + 190214555 38834109 38834108 38834180 72 GCACCTGTAATCCCAGCTACTTGCGAGGCTGAGGCATGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........x:........x.x..x...x::...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -37199097 -57031305 +3622 chr4 + 190214555 38839029 38839028 38839149 121 AGAAAGAGAGAGAAAGAAAGAAAAAGAGAGAAAGAAATAGAAAGAGAGAAAGAGGAAGGAAGGAAGGGAGGGAGGGGAGGCAAAGGGAGGGGAGGAA--------------GGGAGGGAAGGGAG---GGAGGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG .......:::..xx.x.:...:.:.............:....:xxx....xx:::.x....x:x:.:.:.x...:.:.::x.....:.::.....:.--------------:x..:.........---.xx....... 97M14I14M3I10M 80/121 66.1% 138/94230402 0.0% 17/121 14.0% -12309350 -81921052 +3087 chr4 + 190214555 38840510 38840509 38840575 66 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAACCCGGGAGGTGGAGGTTGCA chr4 + 94230402 76033211 76033210 76033276 76033211 76033210 76033276 66 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.:...........::........x.xx.x...x::...:.....:.:..x.xx:..:..:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -37192701 -57037701 +3053 chr4 + 190214555 38841541 38841540 38841584 44 AGAGATTAAAAGGAGAGAGAGAGAGAAAGAGAGAAGAAAAAAGG chr4 + 94230402 57629744 57629743 57629787 57629744 57629743 57629787 44 AGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGG ...:..x.......:::...:..:..........:......... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% -18788203 -75442199 +3474 chr4 + 190214555 38858724 38858723 38858899 176 GAAAAAAGAAAGAAAGAA-AGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAA---------------------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAG chr4 + 94230402 17246051 17246050 17246248 17246051 17246050 17246248 198 GAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAG ...xx:....x...:x..-..x:::.....:...::.x......x:xx::...:x.:.:x:x...xx....x.::..xx:...:..::..:..::.:..xx.xx.:.:.........:x....x.:x..:....:.---------------------::........x.:..x..:.::.x.xx:.x.:.::...x.. 18M1I117M21I41M 104/176 59.1% 198/94230402 0.0% 22/176 12.5% 21612673 NA +3275 chr4 + 190214555 38858734 38858733 38858893 160 AGAAAGAAAGAG-AGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------------GAAAGAAAGAAAGAAAGAGAGAA chr4 + 94230402 17246057 17246056 17246230 17246057 17246056 17246230 174 AGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGA ....x...:x.:-..x:::.....::..:..x......x:xx:.....x.:.:x:x...xx..:.x.::..xx:...:..:...::.::.:..xx.xx..::.:.......:x....x.:x..:....:.::x.:xx.-------------::........x.:..x....::. 12M1I125M13I23M 94/160 58.8% 174/94230402 0.0% 14/160 8.8% 21612677 NA +3710 chr4 + 190214555 38858734 38858733 38858849 116 AGAAAGAAAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGGGA----GAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAG----GAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..xx.x........:......:...:.x...:.xxx...:xx::.:x..:.----...:.x......:.:.:.:...:.::...:..x..x:----....x.x...:...:.:. 61M4I37M4I18M 77/116 66.4% 124/94230402 0.0% 8/116 6.9% -12289645 -81940757 +3280 chr4 + 190214555 38858780 38858779 38858921 142 AGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGA--------------AAGAAAGAAAGAAAAGAAAGAAAGAAAAT chr4 + 94230402 17246076 17246075 17246231 17246076 17246075 17246231 156 AGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGAT .....:...:..x......x:xx::....x.:.:x:x...xx..:.x.::..xx:..::...:...:.:..:.:xx.xx.:::.:.......:x....x.:x..:......::--------------x..x:....::..:.x...:x:....:.. 113M14I29M 84/142 59.2% 156/94230402 0.0% 14/142 9.9% 21612704 NA +3081 chr4 + 190214555 38858824 38858823 38858914 91 AGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----AGAA--AGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ...:...:....xx.x.:...:...:...:.:.:.:.x....----....--::..x.:..x.x:..::.x....:.:...:..:......:.:.:. 42M4I4M2I45M 61/91 67.0% 97/94230402 0.0% 6/91 6.6% -12289555 -81940847 +3115 chr4 + 190214555 38858826 38858825 38858907 82 AGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..::.:.:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x......x:..:..:::x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -2253352 -91977050 +3226 chr4 + 190214555 38858830 38858829 38858911 82 AGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .....:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::.x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -2253348 -91977054 +3352 chr4 + 190214555 38866364 38866363 38866435 72 GCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGTAAGCAGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........::.:........x.xx.x...x::...........x.:x:xx:.....:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -37166842 -57063560 +3724 chr4 + 190214555 38882489 38882488 38882558 70 CATGGTAGTGCATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::..:.....:.--....:.:.........:..:........x.xx.x...x...........:.:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -37150708 -57079694 +3571 chr4 + 190214555 38888387 38888386 38888465 79 GTGGTGCATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAAGATCACTTAAGCCCAGGAGTTGGAGGATGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.::..........::........x.xx.x::.x.....:.:.....:..:.xx:..x..... 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -37144814 -57085588 +3501 chr4 + 190214555 38894022 38894021 38894105 84 ACGTGGTGGTGGGTGCCTGTAGTCCCAGCTACATGGGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::......x::.--......:........x..::........x.xx.x...x::...........:..x.xx:..:..:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -37139174 -57091228 +3185 chr4 + 190214555 38902139 38902138 38902259 121 TTTGTCACTGATTGGCTTTAGGACCTTGGGAAAGTGATTTCACCTCACCAGGTCTCAGTTTTCTCAGTTGTGAAAT---GAGTATACTAATATCCCTTACCTCATAAGATCATTGAGAAGATTA chr4 + 94230402 79037097 79037096 79037220 79037097 79037096 79037220 124 TTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTCCACCTTTCCAAAGTGCTTTGAAAGCATTA ...:.:x....:x:...x..x......:..:....x....:.::.xx.:::..:...:..::::..:x.:.:....---..:x...x.:..x.:..x:x::..xx...xx.x....:.:x.... 76M3I45M 73/121 60.3% 124/94230402 0.0% 3/121 2.5% -40134958 -54095444 +4037 chr4 + 190214555 38909184 38909183 38909281 98 GACCTTGGGCAAGTTACTTAGCCCCTCTGTGCCTCAGCTTACTCATCTGTACACTGGGGATAAT-TTAAATACCTACC-AATAACTTTGTTGTGAGGATA chr4 + 94230402 83501141 83501140 83501240 83501141 83501140 83501240 100 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTA ...::.......:.......:..:x.x..........:..x.:..:.....x.x...:.x.:..-x...x........-x.:.:xxx.:........x.. 64M1I13M1I21M 72/98 73.5% 100/94230402 0.0% 2/98 2.0% -44591957 -49638445 +3131 chr4 + 190214555 38911803 38911802 38911869 67 GGAATACTCTTTCTTTTTCTTTCTTTCTTCTTTTTTTTTTTCTTTTTTTTTCTTTTTTCTTTTTTTT chr4 + 94230402 78346488 78346487 78346554 78346488 78346487 78346554 67 GGAATAGTCTTTCCATTTCTTTCTTTCCACCACTTCTTTTCCAATATCTTCTGTTTCTTTTTTTTTT ......x......:x............:x.:x:..:....:.xx.x.:..::x...:.:........ 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -39434685 -54795717 +3230 chr4 + 190214555 38926414 38926413 38926474 61 TGGAATCAATCTAGCTCTCTAGCTCTGTCTCTCTCTCTCTCCCCTTTTTTTTTTTTTTCCA chr4 + 94230402 68982934 68982933 68982994 68982934 68982933 68982994 61 TAGATTCAAAATATTTCAAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTCCA .:..x....xx..x:..xxx..:.:.:...:..........:.:................. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -30056520 -64173882 +3031 chr4 + 190214555 38936053 38936052 38936103 51 TTGTTTTTGTTTGTTTGTTTGTTTGATTTTTGTTTTGTTTTTTTTGTTTTT chr4 + 94230402 73657896 73657895 73657946 73657896 73657895 73657946 51 TTGCTATTGTTTATTTGTTTACTTGTTTTTTGTTTTGCTTTGTTTCTGTTT ...:.x......:.......::...x...........:...x...x.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -34721843 -59508559 +3053 chr4 + 190214555 38936056 38936055 38936118 63 TTTTTGTTTGTTTGTTTGTTTGATTTTTGTTTTGTTTTTTTTGTTTTTTTTTTTTGAGACGGA chr4 + 94230402 25576005 25576004 25576067 25576005 25576004 25576067 63 TTTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAAACAGA ...:..x..x..x.........x..x...x..x.....x...xx.....:.....x.:..:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 13360051 NA +3128 chr4 + 190214555 38936056 38936055 38936114 59 TTTTTGTTTGTTTGTTTGTTTGATTTTTGTTTTGTTTTTTTTGTTTTTTTTTTTTGAGA chr4 + 94230402 80057863 80057862 80057921 80057863 80057862 80057921 59 TTTTTGTTTGTTTGTTTGTTTTATTATTATTATTTTCTTCAGATTTTTTTATTGTAAGA .....................x...x..:..x.x..:..:xx:.......x..x.:... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -41121807 -53108595 +3104 chr4 + 190214555 38947975 38947974 38948073 99 GAAAGATATTCTATTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTCTTTCTTTCTTCTTTCTTTCTTCTTTTTTTCATTTTTTT chr4 + 94230402 28656800 28656799 28656898 28656800 28656799 28656898 99 GAATGCTACTTTGTGTTTTTTCTTTTAGTTTTTCTTTCTTTATTTGCTCTGCTTTGGTGCGTTGTTGTCTTTGTTTTCTGTTTCCTTTCTAAATTCCTT ...x.x..:.:.:.x..........:xx.:...........x...x:.:.x....xx.x:x..x:.x....:x..:.:.x..:::...:.x.x..::.. 99M 63/99 63.6% 99/94230402 0.0% 0/99 0.0% 10291175 NA +3553 chr4 + 190214555 38947982 38947981 38948076 95 ATTCTATTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT----CTTTCTTCTCTTTCTTTCTTCTTTCTTTCTTCTTTTTTTCATTTTTTTTTC chr4 + 94230402 26457964 26457963 26458062 26457964 26457963 26458062 99 ACTCTACTGTTTCCCATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATTCTCCTGCCCTGTTTCTCATTTCCTCTTTCATTCACCCTTTTCTC .:....:.x...::.x......:..:...:xx...:..:.::..----....x.....:.x.::.x..::.:x....:.....:x....:::....:.. 44M4I51M 63/95 66.3% 99/94230402 0.0% 4/95 4.2% 12490018 NA +3054 chr4 + 190214555 38954593 38954592 38954646 54 ACAGAGACTCCATCTCAAAACAAAACAAACAAACAAACAACAAAAACAAAAAAA chr4 + 94230402 24270306 24270305 24270359 24270306 24270305 24270359 54 ACAAAGACTCTAGTTCATTAAAAAACAAACAAACAAACAAAAAGAAAAAAACAA ...:......:.x:...xx.x...................x..:..x....x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 14684287 NA +3325 chr4 + 190214555 38960346 38960345 38960414 69 CATGGTGGCGCTCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::....:..--..x....:.:...........::........x.xx.x...xx:...........:. 11M2D56M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -37072851 -57157551 +3023 chr4 + 190214555 38976282 38976281 38976330 49 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGCAAACTGCCATGCTGTGA chr4 + 94230402 9844651 9844650 9844699 9844651 9844650 9844699 49 TCTGCTTTAAAGAAAAAAAGAAAAAAAAAAGCAAGCTGCCAAAATGTAA ..:.::.:...:.......:..............:......x:x...:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 29131631 NA +3360 chr4 + 190214555 39000747 39000746 39000829 83 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCCGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x......:.........::::....:...x.xx.x...x::........::.:..x.xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -37032450 -57197952 +3186 chr4 + 190214555 39021395 39021394 39021457 63 AAAAAAAAATAAATAAATAAAAAGAAAAGAAAAGAAAAAAATGAAAAAAGAAAAAAGTAAAAA chr4 + 94230402 84918669 84918668 84918731 84918669 84918668 84918731 63 AACAGAAAATAAATAAATCAAAAGAAAAGACATGGAAAAAAATACATAAATAGAAATTAAAAA ..x.:.............x...........x.x.:......xx.x.x..:x.:...x...... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% -45897274 -48333128 +3260 chr4 + 190214555 39041056 39041055 39041145 90 AAAAAAAAAAAAAAAAAAAAGCTAAGGAAATTCTCTTTCTTGTCTTTTCTTTTTTTCTTTTTTTGTATTTGGGCCAAATTGACAGGTGAA chr4 + 94230402 28120651 28120650 28120738 28120651 28120650 28120738 88 AAAAACAAAACAAAAAAAAACGTAATGAAATTCATCTTCTTCTGACCCTTTTTTTTTTTTTTTTCATTTTGAAATAAAT--GTAGATGAA .....x....x.........xx...x.......x::.....x.xx::::.......:.......xxx....::x:....--::..:.... 79M2D9M 62/88 70.5% 88/94230402 0.0% 2/88 2.3% 10920405 NA +3034 chr4 + 190214555 39069428 39069427 39069514 87 TTTTATATATATATATATATATATATATAT----ATATAT---------------------ATATATATATACACACACACACACACACACACACACACATACATATTTATA chr4 + 94230402 46140795 46140794 46140906 46140795 46140794 46140906 112 TTTTACAGATATGTGTGCATTCAAATGTATTGCAATAAATGTTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .....:.x....:.:.::..x:.x..:...----...x..---------------------.........:......x.x....:........::::.:.....x.:...:. 30M4I6M21I51M 64/87 73.6% 112/94230402 0.0% 25/87 28.7% -7071367 -87159035 +3027 chr4 + 190214555 39069440 39069439 39069514 75 ATATATATATATATATATATATATATATATATATACACACACACACACACACACA---------CACACACATACATATTTATA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........x:---------:...::x...x....x.... 55M9I20M 53/75 70.7% 84/94230402 0.0% 9/75 12.0% 15821718 NA +3036 chr4 + 190214555 39069455 39069454 39069494 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 34660373 NA +3098 chr4 + 190214555 39077322 39077321 39077391 70 CATGGTGGCAGGCACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:.........:.::........x.xx.x...xx::x.........:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -36955875 -57274527 +4615 chr4 + 190214555 39081998 39081997 39082155 158 CTGTTATCTACAGCTTGCCTTCTTCAGCTTTCACAGGTTGTAGAAG---CATGCTGTAAGTTTTTAATGAAACAGCTTCATCCATCCAACTGTCTTGGAATTCGTTCTTTTGCTGATGCCCAAGGTTGTACAGATTTGCATAAAGTGGCTCACAATTATAC chr4 + 94230402 24945746 24945745 24945903 24945746 24945745 24945903 158 CTGCTTCCAGCAGCTGGTCTCTTGCAACT---GCAGGATGTGAAAAGGACTTGCTGTGAATTTTTGGAATCCCAGCTTCATCCTGTCAACTGCTTGGGAATTCGTGCTTTTGCTGACATGCATGCATGCACGGATCTATTGAACAAGGCCAACACATATGC ...:.x:.x:.....x.:..::.x..:..---:....x...::..:---.x......:.:.....::x:xxx...........xx:......::.x.........x..........:::x..x.xx..:..:...:.::xx..x:x...:x...xx...:. 29M3D14M3I112M 100/155 64.5% 158/94230402 0.0% 6/155 3.9% 14136252 NA +3035 chr4 + 190214555 39095585 39095584 39095656 72 GTATGTTTACATATACACGTATATATATACATATATATACATATGTATATATGTATGTACATACTGAAACAA chr4 + 94230402 56867301 56867300 56867372 56867301 56867300 56867372 72 GTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACAATGTTGCAA ..:...xx.:.:......:....:.:xx.:....x.:.:...:.:....:.x.........:.x..xx:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -17771716 -76458686 +3026 chr4 + 190214555 39101836 39101835 39101892 57 AGTCTGTCTCAAAAAAAAAAAAAAAT-----ATATATATATATATATACACACACACACACA chr4 + 94230402 74671046 74671045 74671107 74671046 74671045 74671107 62 aacccaccacaAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACA .::.:::.x...:..x.x.x......-----:.............................. 26M5I31M 46/57 80.7% 62/94230402 0.0% 5/57 8.8% -35569210 -58661192 +3077 chr4 + 190214555 39101849 39101848 39101899 51 AAAAAAAAAAAATATATATATATATATATACACACACACACACACACATAT chr4 + 94230402 51472498 51472497 51472548 51472498 51472497 51472548 51 AAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...::......:..x.....:.......x.....:.:.:..x:........ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -12370649 -81859753 +3027 chr4 + 190214555 39101857 39101856 39101930 74 AAAATATATATATATATATATACAC----ACACACACACACACATATACACACACACACATATATATATACATATATA chr4 + 94230402 74526046 74526045 74526122 74526046 74526045 74526122 77 AAAATAT-TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA .......-.:..x..xx.x.x....----.:x............:..:x...:.....x.......::..:....:.. 7M1D17M4I49M 56/73 76.7% 77/94230402 0.0% 5/73 6.8% -35424189 -58806213 +3119 chr4 + 190214555 39101873 39101872 39102014 142 TATATACACACACACACACACACATATACACACACACACATATATATATACATATATACACACATATATACACACATATATATACACACACATATATATGTATACATATATATATATATATGCATGCAGAGGTAGAAAAAGA chr4 + 94230402 54963193 54963192 54963327 54963193 54963192 54963327 135 TGTATATTCATACAGATGCACACCTATATACACACACAC--AGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATG-----GAACAACTGCAGAACTCATTATTAGCCCAAAGGCAGAAaaaga .:....:x..:...x.::.....x....:..........--.xx:.::.:.::x:..........x.....:x.xx.x.x.x.x:...:....:-----.x.:.xx.::.x.xx.xxx...xx::x..:...:......... 39M2D53M5D43M 85/135 63.0% 135/94230402 0.0% 7/135 5.2% -15861320 -78369082 +3094 chr4 + 190214555 39101883 39101882 39101929 47 CACACACACACACATATACACACACACACATATATATATACATATAT chr4 + 94230402 74526077 74526076 74526123 74526077 74526076 74526123 47 CACACACACACACATGAACATACACAAATATATACGTATATATGTAT ...............:x...:.....x.:.....::....:..:... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -35424194 -58806208 +3521 chr4 + 190214555 39101895 39101894 39101987 93 CATATACACACACACACATATATATATACATATATACACACATATATACACACATATATATACACACACATATATATGTATACATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA-------AAAAAGTTACATGAATAAATATATATAT ...:.::::.::......:..x...:x......:..........:.:.......x:x.-------.x.x.xx..:...x...x.......... 58M7D28M 62/86 72.1% 86/94230402 0.0% 7/86 8.1% 15854174 NA +3032 chr4 + 190214555 39101919 39101918 39102000 82 TATACATATATACACACATATATACACACATATATATACACACACATATATATGTATACATATATATATATATATGCATGCA chr4 + 94230402 21109218 21109217 21109299 21109218 21109217 21109299 82 TATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA ...x:....:...x........:x.::::.:x....:::.:::..x:..::x.x.:.::....:.:...:x........... 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 17992701 NA +3073 chr4 + 190214555 39101925 39101924 39101994 70 TATATACACACATATATACACACATATATATACACACACATATATATGTATACATATATATATATATATG chr4 + 94230402 54963193 54963192 54963262 54963193 54963192 54963262 70 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACG .:....:x..:.:.x..:.....x......:.........xx:.::..:::x....:.:.:..x....:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -15861268 -78369134 +3126 chr4 + 190214555 39105626 39105625 39105690 65 GTGTATTTATATGTTTATATATATACACATATAAAATGTGTATATGCACATATATACATATAAAT chr4 + 94230402 87329498 87329497 87329562 87329498 87329497 87329562 65 GCATATTGAAATGTATATATATACACGTATACTAGCAGTGTACATACATACACACACATATAAAT .::....x.x....x........:..::...:x.:xx.....:..:..:.:.:.:.......... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -48223872 -46006530 +3437 chr4 + 190214555 39105701 39105700 39105780 80 CATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACA-----------CACACACACACACACACACATAAAAT chr4 + 94230402 23247721 23247720 23247811 23247721 23247720 23247811 91 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAAT ...:.x.:...:....:.:..x.:..x.:.......:.....:...........-----------:...::x.:.x.:.:.:.:..:.... 54M11I26M 57/80 71.2% 91/94230402 0.0% 11/80 13.8% 15857980 NA +3108 chr4 + 190214555 39105713 39105712 39105774 62 CACATATATGTGTGTATATATGTATACACACACACACACACACACACACACACACACACACA chr4 + 94230402 61270774 61270773 61270835 61270774 61270773 61270835 62 CATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..::x....:.x..............:..:...::.....x....x..:::.:.x::..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -22165061 -72065341 +3309 chr4 + 190214555 39109600 39109599 39109655 56 ATTTTAACTTATTTATAATTTCTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTGGAG chr4 + 94230402 89499340 89499339 89499395 89499340 89499339 89499395 56 ATTTTTACTAATGTATAATTTCTTCCTCTTTATTTTTTTTTTCTCTTTTCTTAAAG .....x...x..x...........::.....x.....:....:.:....:..::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -50389740 -43840662 +3272 chr4 + 190214555 39113002 39113001 39113131 130 CATATATTCTTTTTGCAGACTTTATGCAGTTGGTGGTCGTGATGGAAGTTCTTGTCTCAAATCAGTAGAATGTTTTGATCCTCATACTAATAAGTGGACACTGTGTGCACAGATGTCAAAAAGGAGAGGT chr4 + 94230402 47188003 47188002 47188130 47188003 47188002 47188130 128 CGTATGCCTTTCAGGTAGAGTCTATGCAGTGGGTGGACATGATGGAAATGAACATTTAGGAAGCATGGAAGTGTTTGATCCTCTCACAAACAAGTGGATGATTAAGGCATCAATG--AACACAAAGAGGT .:...::::..:xx.:...x.:........x.....x.:........:.xxx::.:.x::.xxx:.:...xxx..........x:..x..:.......::x.xx:x...:x:...--..x.x::...... 115M2D13M 78/128 60.9% 128/94230402 0.0% 2/128 1.6% -8075001 -86155401 +3063 chr4 + 190214555 39115252 39115251 39115324 73 TGCTGTTGGGGGGTATGATGGACAGGCATACCTTAATACTGTGGAGGCTTATGATCCCCAGACAAATGAGTGG chr4 + 94230402 47190537 47190536 47190609 47190537 47190536 47190609 73 TGCAGTTGGAGGTCACAACGGCAACGCGTACCTGAATACTGTGGAAGCATTTGATCCCATAGTGAATAGGTAG ...x.....:..x:.::.:..xx.x..:.....x...........:..x.x.......xx::::...::..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -8075285 -86155117 +3513 chr4 + 190214555 39118625 39118624 39118698 74 GTGCACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:..:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36914579 -57315823 +3404 chr4 + 190214555 39132478 39132477 39132539 62 GCGCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGTTGGGAGGCTCACTTGAGCCCAGGAGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:....x......:..........:::........::xx.x.:xx.......:.....:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -36900726 -57329676 +3308 chr4 + 190214555 39135773 39135772 39135846 74 GCGCTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGGGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..x.x....:.:...........::........x.xx.x...x..........::.::.x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -36897431 -57332971 +3100 chr4 + 190214555 39145519 39145518 39145582 64 CCAGAAAAGCTAGTTTTTTGAGGTTTTTTGTTTGTTTGTTTTGCTTTGTTTTTGTTTTTGTTTT chr4 + 94230402 32599060 32599059 32599123 32599060 32599059 32599123 64 CCAACAGAGCTAGGTATTTGAGGGGTTTTGCTTGTTTGTTCTGGTCGTCTTTTGCCTTTTTTTT ...:x.:......x.x.......xx.....:.........:..x.:xx:.....::...x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 6546459 NA +3172 chr4 + 190214555 39145533 39145532 39145571 39 TTTTTGAGGTTTTTTGTTTGTTTGTTTTGCTTTGTTTTT chr4 + 94230402 86593722 86593721 86593760 86593722 86593721 86593760 39 TTTTCAAGGGTTTTTGTTTGTTTGTTTTGCTTTGTTTTT ....::...x............................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -47448189 -46782213 +3730 chr4 + 190214555 39152265 39152264 39152341 77 GTTGTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....:.x....:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -36880936 -57349466 +3115 chr4 + 190214555 39160032 39160031 39160120 89 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGATTCCGGGAGACAGAGGCTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...x....:.:...........::........x:xx.x...x::.....x:..:.:..x:xx:.....:..------..x..x...... 71M6D12M 58/83 69.9% 83/94230402 0.0% 6/83 7.2% -36873175 -57357227 +3048 chr4 + 190214555 39161570 39161569 39161629 60 TCCAGTTAATTTTTTCTTTTCCTTCCTTCCTTCCTTCTTTCTTCTTTTTTTTTTTTTTTT chr4 + 94230402 73754473 73754472 73754532 73754473 73754472 73754532 60 TCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTT ...xx...xx..::.x.x.x:......x....x....:.....:................ 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -34592903 -59637499 +3067 chr4 + 190214555 39163058 39163057 39163108 51 TACATAGGGGCAAAAACCAGAAGGAAATATGCAAAAAAAGTAATATACATT chr4 + 94230402 31381337 31381336 31381387 31381337 31381336 31381387 51 TACATAGGCAAGAAAAACAGAAGGAAATATGCAAAATAGGTGATATATTTT ........x:x:....x...................x.:..:.....:x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 7781721 NA +3001 chr4 + 190214555 39176923 39176922 39176989 67 ACAACGCAAAAAAAAAAAAAAAAAAAAAAACAACTAAACAAAAACAAACAAACAAAAAAATCCCCTC chr4 + 94230402 5597440 5597439 5597506 5597440 5597439 5597506 67 ACAACACAGAAGTGCAAAAACAAAACAAAACAGCAACAAAAAGACAAACAATCCAAAAAACTGCTTC .....:..:..:x:x.....x....x......:.x.x.x...:........x.x......::x.:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 33579483 NA +3422 chr4 + 190214555 39176924 39176923 39176978 55 CAACGCAAAAAAAAAAAAAAA-AAAAAAAACAACTAAACAAAAACAAACAAACAAA chr4 + 94230402 78976522 78976521 78976577 78976522 78976521 78976577 56 CAATGCAGGAAAAAAAGAAAAGAAAAAAAACAACCAAACAAAAACAACCCAAAAAA ...:...::.......:....-............:............x.x..x... 21M1I34M 47/55 85.5% 56/94230402 0.0% 1/55 1.8% -39799598 -54430804 +3422 chr4 + 190214555 39176924 39176923 39176978 55 CAACGCAAAAAAAAAAAAAAA-AAAAAAAACAACTAAACAAAAACAAACAAACAAA chr4 + 94230402 78971763 78971762 78971818 78971763 78971762 78971818 56 CAATGCAGGAAAAAAAGAAAAGAAAAAAAACAACCAAACAAAAACAACCCAAAAAA ...:...::.......:....-............:............x.x..x... 21M1I34M 47/55 85.5% 56/94230402 0.0% 1/55 1.8% -39794839 -54435563 +3073 chr4 + 190214555 39176929 39176928 39176998 70 CAAAAAAAAAAAAAAAAAAAAAAACAACTAAACAAAAACAAACAAACAAAAAAATCCCCTCTAAGCACTG chr4 + 94230402 17691366 17691365 17691435 17691366 17691365 17691435 70 CAAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAAAAGCTCATTTCAGTCAGTG ...................:..x....x......:::.x...x.x..x:....:::.x:.::.:x..x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 21485563 NA +3197 chr4 + 190214555 39176930 39176929 39176985 56 AAAAAAAAAAAAAAAAAAAAAAACAACTAAACAAAAACAAACAAACAAAAAAATCC chr4 + 94230402 10103117 10103116 10103172 10103117 10103116 10103172 56 AAAAAAAAAAAAAAAGACAAAACCAGCCAAGCAAAACCAAGCAACAACAAAAACCC ...............:.x....x..:.:..:.....x...:...xx.x.....:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 29073813 NA +3080 chr4 + 190214555 39176933 39176932 39176986 54 AAAAAAAAAAAAAAAAAAAACAACTAAACAAAAACAAACAAACAAAAAAATCCC chr4 + 94230402 11838078 11838077 11838131 11838078 11838077 11838131 54 AAAAAAGGAAAAAAAGAAAACAACAGATCTAAAGCAAATAAACAACAAGAGCCC ......::.......:........x:.x.x...:....:......x..:.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 27338855 NA +4059 chr4 + 190214555 39187290 39187289 39187362 73 TGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:...........::........x.xx.x...x...........:....x.xx:..:..:.. 73M 56/73 76.7% 73/94230402 0.0% 0/73 0.0% -36845915 -57384487 +3239 chr4 + 190214555 39198864 39198863 39198927 64 GTGGCTCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:x.:.x......:...........::........x.xx:x...x::........::.:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -36834337 -57396065 +3281 chr4 + 190214555 39210979 39210978 39211048 70 ACCTGTAGTCCAAGCAACTTGGGAGGCTGAGGTGGGAGAATCACTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......:.x...x.....::........x:xx.x...x.......:..::.:..x..x:.....:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -36822229 -57408173 +3307 chr4 + 190214555 39211067 39211066 39211133 67 TGTAGTCCCAGCAACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.....x.....::........x:xx.x.:.x.......:..::.:..x..x:.....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -36822144 -57408258 +3028 chr4 + 190214555 39225803 39225802 39225870 68 CCTTTCCTTCCCTTCCCTTTCTCTTCCCTTTCCCTTCCCTTCCTTTCCTTCTCTTCTCTTTTTCTTTT chr4 + 94230402 58593441 58593440 58593508 58593441 58593440 58593508 68 CTTTTCTTTTCCCACACTTTCTCATCCCATTCCCCTCATCTCCCTTTTTTTTTTTCCCCCATTCCCTT .:....:..:..:x.x.......x....x.....:..x::...:..::..:.:...:.::x...::.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -19367638 -74862764 +3422 chr4 + 190214555 39231181 39231180 39231253 73 TGCGCCTGTAGTCCCAGCTATTCGGGAGGCTGAAGCAGGAGAATAACTTGAACCCAGGAGGCCGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.......:.:.::.......:x.xx.x...xx............:..x::x:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -36802024 -57428378 +3962 chr4 + 190214555 39253643 39253642 39253721 79 GTGGTGCATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAAAGTCGCTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--..................::........x.xx.x:.:x.:...........:..x:xx:.....:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -36779558 -57450844 +3582 chr4 + 190214555 39265636 39265635 39265732 97 GTGGTGCATGCCTATAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCGGGGAGGCGGAGATTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ........:.--.:....:.........:..:........x.xx.x...x..........x:.:..x:xx:.::..:..------..x..x...... 10M2D67M6D12M 66/89 74.2% 89/94230402 0.0% 8/89 9.0% -36767565 -57462837 +3250 chr4 + 190214555 39265759 39265758 39265840 82 AGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAATCCAAGAAGTACATTCTCTGTGCATGTGAAAGAAAATATGGTATTTTG chr4 + 94230402 33767111 33767110 33767192 33767111 33767110 33767192 82 AGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAACTCTCTAAAGTGGTTAATCAAAGCACTAGATTTTG ....:.:x:.:.............x.........x.......:.:x.:.....:x:xxx..x..xx...::.:x:x...... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 5498648 NA +3332 chr4 + 190214555 39275200 39275199 39275282 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:.........::::......:.x.xx.x...x::.........:.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36757997 -57472405 +3325 chr4 + 190214555 39281226 39281225 39281306 81 TATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCCTACTAACAAGTCAGGAACATATTTTTCTGTTTTCTTCT chr4 + 94230402 84631452 84631451 84631529 84631452 84631451 84631529 78 TATATATATATATAGAGAGAGAGAGAGATACAGTGACTATGT---CAGACAAAACAGGAAGAAATTGTTCTTCTGTCTTCT ............x...............x.x..x..xx.x.:---.x:....:x......x.x...x....x:.x...... 42M3D36M 60/78 76.9% 78/94230402 0.0% 3/78 3.8% -45350226 -48880176 +3755 chr4 + 190214555 39290684 39290683 39290757 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x.x..x...xx:.........:.:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -36742520 -57487882 +3491 chr4 + 190214555 39298168 39298167 39298250 83 CATGATGGCGCACACCTATGGTCCCAGCTACTTGCAGGGCTGAGGCGGGAGGATCACTTGAGCCCAGGAGGGCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...:....:--.:.:..:...........x.:.......x.xx.x.:.x.......:.....:..xx:x:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -36735029 -57495373 +3276 chr4 + 190214555 39299786 39299785 39299857 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGCAGAGGCTCCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.x.........:.:..x:xx:....x:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -36733420 -57496982 +3406 chr4 + 190214555 39320209 39320208 39320291 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGTGAGTTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx....:x::........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36712988 -57517414 +3639 chr4 + 190214555 39343974 39343973 39344043 70 CATGGTGGTGGGCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x....:.:........:..::........x.xx.x...x.:...........:.. 10M2D58M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -36689223 -57541179 +3323 chr4 + 190214555 39346336 39346335 39346418 83 CGTGGTGGTACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGGGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:..:.--....:.:...........::........x.xx.x...x.:........::.::.x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36686861 -57543541 +3049 chr4 + 190214555 39353384 39353383 39353430 47 AACGAGACTGTCTCAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAA chr4 + 94230402 15009835 15009834 15009881 15009835 15009834 15009881 47 AATGGGATTGTCACAAAAAAAAAAAAAAAACAAGAAATCGAAAAAGA ..:.:..:....x.................x..:....::.....:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 24343549 NA +3023 chr4 + 190214555 39355081 39355080 39355133 53 AAAAAAAAAAAAAAAAATACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729494 55729493 55729546 55729494 55729493 55729546 53 AAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ...........:.x.:.........xx:.x....:....::..x:........ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -16374413 -77855989 +3112 chr4 + 190214555 39355084 39355083 39355137 54 AAAAAAAAAAAAAATACACACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ............:...x.:.......xx:.x....:....::..x:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -16374409 -77855993 +3696 chr4 + 190214555 39355862 39355861 39355944 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAAAACCGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:...........::.:......x.xx.x:..x.:.........:.:..x.xx:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -36677335 -57553067 +3363 chr4 + 190214555 39360362 39360361 39360429 68 ACGTGGTGGCATACGTCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAAGCAAATCGCTTGAACCCAG chr4 + 94230402 76033196 76033195 76033261 76033196 76033195 76033261 66 ACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ..:::....:::....--.....:.......:...::........x.xx.::..x.:........... 16M2D50M 49/66 74.2% 66/94230402 0.0% 2/66 3.0% -36672834 -57557568 +3238 chr4 + 190214555 39360595 39360594 39360677 83 CATGGTGGCGAGCACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x..:...:...........::........x.xx.x...x::........::.:.:x:xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36672602 -57557800 +3148 chr4 + 190214555 39380066 39380065 39380151 86 TTTTGTTTCATTGATCTTTTGTATTGTTTTCTTCATTTCAATTTCATTTATTTCTGCTCTAATCTTTATTATTTCTTTTCTTCTAT chr4 + 94230402 7526232 7526231 7526317 7526232 7526231 7526317 86 TTTGGTTTCTTTGCTCTTTTGTTTTGTTTTACAAATCCTTATTTAATTTATCCCTGCTTTGGAAATTCTAATTTCTGTTATTATGT ...x.....x...x........x.......x:xx..:::x....x......::.....:.::xxx..x.x......x..x..x.:. 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% 31853834 NA +3522 chr4 + 190214555 39388971 39388970 39389044 74 GTGTGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x..:...:...........::........x.xx:x...x...........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36644233 -57586169 +3170 chr4 + 190214555 39392938 39392937 39393007 70 CATGGTAGCACATGCCAGTAATCCCAGCTACTCAAGAGGCTGAGGCACAAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::..:.::..:.:--...:.:.........::.:........x.x::x...x.:...........:.. 15M2D53M 48/68 70.6% 68/94230402 0.0% 2/68 2.9% -36640259 -57590143 +3045 chr4 + 190214555 39394663 39394662 39394700 38 CAAAAAAAGAGAGAAAATAATAGTAATAATAATAAAAT chr4 + 94230402 89826859 89826858 89826896 89826859 89826858 89826896 38 CAAAAGAAGGGAGAAAATAATAGTAATAATAAAAAAAT .....:...:......................x..... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -50432196 -43798206 +3245 chr4 + 190214555 39399881 39399880 39399953 73 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:.::........x.xx.x...xx:.x......::.:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -36633324 -57597078 +3177 chr4 + 190214555 39401851 39401850 39401930 80 TGGTATGCGTTTAAATAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGGTTGAACCCAGGAGCCAGAGGTTGAAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGT----GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:::...----:..:.:............:........x.xx.x...x::x..........:...:xx:..:..x.. 10M4D66M 54/76 71.1% 76/94230402 0.0% 4/76 5.3% -36631351 -57599051 +3304 chr4 + 190214555 39401980 39401979 39402050 71 TCTATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACACA chr4 + 94230402 51472479 51472478 51472547 51472479 51472478 51472547 69 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAA--TATACATATATAAACACATATATACCTACACATA ..:......:x...x.x.x...::......:x...--....:.......x.:.:........x......:. 35M2D34M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% -12070499 -82159903 +3271 chr4 + 190214555 39401983 39401982 39402051 69 ATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACACAC chr4 + 94230402 78347559 78347558 78347627 78347559 78347558 78347627 69 ACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACAC .:.x.x.....x..x....x...x..:.......:xx.:.:.xx..:.........:...:........ 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -38945576 -55284826 +3643 chr4 + 190214555 39401986 39401985 39402048 63 TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACA chr4 + 94230402 1494993 1494992 1495055 1494993 1494992 1495055 63 TTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.:::...x.:.........x.:...............:.:..:...:.....x...::.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 37906993 NA +3074 chr4 + 190214555 39401991 39401990 39402052 62 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACACACA chr4 + 94230402 78347565 78347564 78347626 78347565 78347564 78347626 62 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACA .....x..x....x...x..:.....x.:xx.:.:.xx..:...........:......... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -38945574 -55284828 +3291 chr4 + 190214555 39401991 39401990 39402046 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x.:..:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 37906991 NA +3163 chr4 + 190214555 39401997 39401996 39402055 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACACACATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.:.:...:....x:........ 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -12070493 -82159909 +3059 chr4 + 190214555 39403842 39403841 39403885 44 TGTCCCTGAACTTAAAAGTTAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 61263084 61263083 61263127 61263084 61263083 61263127 44 TGTCTCTAAACTGTAAAGTTAAAAAAAAAAAAAAAAAAGTAAAG ....:..:....xx........................:x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -21859242 -72371160 +3020 chr4 + 190214555 39411306 39411305 39411353 48 GGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGATTTTTTTTTTTTTTTT chr4 + 94230402 39929905 39929904 39929952 39929905 39929904 39929952 48 GGTGGCTTTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTT ...xx:....x..:............xx...:................ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -518599 -93711803 +3103 chr4 + 190214555 39413584 39413583 39413665 82 AGTGGTGGCACATACCTGTAGTCCCAGCTACTTGGGAGGATGAGGTGGGAAGATCACTTAAGCCCGGGAGGTCAAGGCTGCA chr4 + 94230402 76033200 76033199 76033276 76033200 76033199 76033276 77 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .......-----:..x......:...........::...x....x:xx.x::.x.....:.:...:.:..x.:x:.....:. 7M5D70M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% -36619616 -57610786 +3555 chr4 + 190214555 39418812 39418811 39418890 79 GTGGTGCAAGCCTGAAATTCCAGCTACTTGTGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........x.--..x.:.............x:........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -36614389 -57616013 +3280 chr4 + 190214555 39433729 39433728 39433802 74 GTGCACCTGTAATCCCAGCTACTCGGGAAGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::.:......x.xx.x...x::........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36599475 -57630927 +3011 chr4 + 190214555 39443362 39443361 39443403 42 CCTCCTCCCTACTCCCCCCAAAAAAAAGAAAAAAGAAAAAAA chr4 + 94230402 57999187 57999186 57999228 57999187 57999186 57999228 42 CCTCCCCTCCCCCCCCCCCAAAAAAAAGAAAAAAAGAAAAAA .....:.:.:x.:.....................::...... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -18555825 -75674577 +3280 chr4 + 190214555 39459829 39459828 39459902 74 GTGCGCCTGTAGTCCCAGCTACTCGCCAGGCTGAGGCAGGAGAATCGCTTGAACCCGCGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........:.xx........x.xx.x...x.:.........:x:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36573375 -57657027 +3299 chr4 + 190214555 39462856 39462855 39462929 74 GTGAGCCTGTAGTCCCAGCTACTTGGAAGTCTGAGGCTGGAGAATCACTTGAGCTTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:.x......:...........:...x.....x.:x.x...x.......:.:::.:..x.xx:.::..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -36570348 -57660054 +3227 chr4 + 190214555 39468487 39468486 39468554 68 AGAAAGGAAAAAAAAAATATATATATATATATATATTTTTTTATATTATATATATTCATATATATTTA chr4 + 94230402 25394510 25394509 25394577 25394510 25394509 25394577 68 AAACAAGAAGTAAAAAATACATATATATATATATGTTCTGAGGGATAATATATTGTCACATACATTTA .:.x.:...:x........:..............:..:.xxx:x..x......xx...:...:..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 14073977 NA +4132 chr4 + 190214555 39472048 39472047 39472227 180 CACACATTTTGTATGTTACATGTACTTATATATATACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACACACATATATACACATCTTATTCTTATGATAAAGTCAGCTAGAGAAAAAATTTTTTGAAGAAAATCATAAGGAAAAGAAAATATA chr4 + 94230402 89748633 89748632 89748807 89748633 89748632 89748807 175 CACGCAATACCTAGATAATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACAGTCCCTGTCATTTTTATCGGACACTCATGTAACAAATTCA-----AGGGAGTTATTCTCAGAGAGTCTCATAAAGAAAACATAACATA ...:..x.x:x..x:.x.::.....x.....:.xx:x.......x:.......:.:...::.:.:........x....::x.x.....:...xx.x.xxx:..x.x:.:xxxx:.:..x.:.:.:...x...-----..::.:xxx..:.:::...:xx......:.....x.x..:... 132M5D43M 106/175 60.6% 175/94230402 0.0% 5/175 2.9% -50276585 -43953817 +3040 chr4 + 190214555 39472082 39472081 39472137 56 TACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACA chr4 + 94230402 68837088 68837087 68837143 68837088 68837087 68837143 56 TAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA ..x.x.:.....:....:.:.x....:.:...x.:...:.:.......::...... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -29365006 -64865396 +3514 chr4 + 190214555 39472093 39472092 39472160 68 GTGTGTATATCTGTATATACACACACACATATACACACACACACACACACACACATATATACACATCT chr4 + 94230402 54963190 54963189 54963257 54963190 54963189 54963257 68 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCT ..x.......:::..:.x.::.....x:...............xx...:::.:.x:...:........ 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -15491097 -78739305 +3308 chr4 + 190214555 39475076 39475075 39475149 74 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.::........x.xx.x...xx:........::.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -36558128 -57672274 +3432 chr4 + 190214555 39475241 39475240 39475341 101 CATGGTGGTGTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATTGCTTGAACCCGAGAGACAGAGGTTGTGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::......:::.--......:...........::........x.xx.x:..x::.........:::..x:xx:..:...:.------..x..x...... 14M2D67M6D12M 65/93 69.9% 93/94230402 0.0% 8/93 8.6% -36557956 -57672446 +3171 chr4 + 190214555 39499135 39499134 39499198 64 AGAATGGAAATTAAAATGTAAAACCAAGATAAATATTTTTGGCTTTTGGACTAAAAAAAAAAAG chr4 + 94230402 91509310 91509309 91509373 91509310 91509309 91509373 64 AGAATGAAAAATAAAATGTTTCCTTCAAATATATATTTTTGTATTTTCAACTAAAAAAAAAAAG ......:...x........xxxx::x.:...x.........xx....x:............... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -52010175 -42220227 +3176 chr4 + 190214555 39499135 39499134 39499204 70 AGAATGGAAATTAAAATGTAAAACCAAGATAAATATTTTTGGCTTTTGGACTAAAAAAAAAAAGATTAGT chr4 + 94230402 91506763 91506762 91506832 91506763 91506762 91506832 70 AGAATGAAAAATAAAATGTTTCCTTCAAATATATATTTTTGTATTTTCAACTAAAAAAAAAAAAAGTTGT ......:...x........xxxx::x.:...x.........xx....x:..............:.x.x.. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -52007628 -42222774 +3607 chr4 + 190214555 39506885 39506884 39506979 95 CAGGGTGGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTCAGGTGGAAGGATCACTTGAGCCCAAGAGTTGGAATCTAGGCTGGACAACACAGTG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC-----TTTGGGCTGTAGAACATGATG ..x:.........x......:.........::::.....x..x:xx:x.:.x.......:....::..:-----.:.:.....x.x....:::.. 69M5D21M 62/90 68.9% 90/94230402 0.0% 5/90 5.6% -36526312 -57704090 +3585 chr4 + 190214555 39523664 39523663 39523746 83 CATGGTGGCACATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:..--...:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -36509533 -57720869 +3162 chr4 + 190214555 39533342 39533341 39533411 70 CATGGTGGTGTGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATCGCCTGGACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......::..--......:......x..:.::........x.xx.x...x.:.:..:....:.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -36499855 -57730547 +4066 chr4 + 190214555 39534901 39534900 39534971 71 CACGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACCTGGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...:......--...x....:.:...........::........x.x..x...x..........::..:.. 10M2D59M 56/69 81.2% 69/94230402 0.0% 2/69 2.9% -36498296 -57732106 +6452 chr4 + 190214555 39541784 39541783 39542061 278 TTGTAATGTTTGATGTGCCTGCTCTATAATTCCTTGTCCTCGAGGGTTATAAGGAATTCTTGTTTTGTGAGTGACTGCCTATAACTGTAAACAATTTTGAAAAGCATGACTAACTTAAGCAGGTCCATTGTCAGTTTTTAATTGTTTAGGGACCCTCATATCGGCAAA-TGACAACAGACAATGTCATTGGACATGGCCAGCTGTTTCACCTGTTTGACATGTAGCATGCAGCATATGAGAATAAGTGTCTATAGTCATATGAACATAGCTAAGTTTGT chr4 + 94230402 19065337 19065336 19065614 19065337 19065336 19065614 278 TTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGA-GATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTACCAATCTAAAGCTGT ..x.......:x..x......:....:x..:x::..x...xx:..xxx:.xx:.:..x.::..x:....xx.x...x..:..:x:..:.:.x.x.:::x..:xx:.:.....::x..:..x..x........x.......x....xxx..x.:x.:....x.x.....-::.....x..-:...:.x..xx.....xx:...:x....x..x.x....xxx..:..x::..xx.x....xx...x..:.......x..::..x..xx.x....:x:... 168M1I10M1D99M 171/277 61.7% 278/94230402 0.0% 2/277 0.7% 20476447 NA +3229 chr4 + 190214555 39545749 39545748 39545794 46 TGTCTCAAAAAAAAAAAAAAAACCAAAAACCAAAAAATCAAAACCA chr4 + 94230402 45589521 45589520 45589566 45589521 45589520 45589566 46 TACCACAGGAAAAAAAAAAAAACCAAAAACCAAAAAACAAAAACCA .::.x..::............................:x....... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -6043772 -88186630 +3347 chr4 + 190214555 39554477 39554476 39554550 74 GTGCACCTGTAATCCCAGCTACTCGGTAGGTGGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.:x...:x...x.xx.x...x..........::.:..x:xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36478727 -57751675 +3684 chr4 + 190214555 39563856 39563855 39563914 59 CTTTTTCTTTTTTCTTTCTCCTCTTCCTCCTCCTCCTCTTCTTCTTCCCCTTCTCTTCC chr4 + 94230402 7218317 7218316 7218375 7218317 7218316 7218375 59 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCC ......:.....::...x....:.:..:.....:..:.:..:..::...x......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 32345539 NA +3559 chr4 + 190214555 39566836 39566835 39566909 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGCGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx.x...x.:........::x:..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -36466368 -57764034 +3580 chr4 + 190214555 39567001 39567000 39567078 78 TGGTACACGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAGTCCAGGAGGTGGAGGTTGTAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....--....:.:...........::........x.xx.x...x::.....::....:..x.xx:..:..... 9M2D67M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% -36466201 -57764201 +3432 chr4 + 190214555 39576626 39576625 39576698 73 TGTATATAACTTATACCTATGTGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 29797131 29797130 29797203 29797131 29797130 29797203 73 TGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT ..:.:..::.x..:.:x::.:..:.............x.........:.:.:.x.x.x......x:.....:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 9779495 NA +3068 chr4 + 190214555 39576644 39576643 39576715 72 ATGTGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 40334931 40334930 40335002 40334931 40334930 40335002 72 ATTTGTGTATGTATGTGTAGATATACATTTGCATATATGTATCTGATATTACTTTATAGCTTCTTTGTTTCT ..x.....:..........x.....:..x.::......:...:.xx.x..x:...x.xx:..:...x...:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -758287 -93472115 +3036 chr4 + 190214555 39576647 39576646 39576705 59 TGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .........:...:.....:.:........x.xx.x.xx...x.....x..x....... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 6325644 NA +3119 chr4 + 190214555 39576647 39576646 39576707 61 TGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..:::.....:.:.................x:x....::.x.....:.x....:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 16053883 NA +3393 chr4 + 190214555 39576649 39576648 39576710 62 TGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGA---GTTTTTGTTTGTTTTTATTATTTTTTT .......:...........:.:........x.---:.....x...x.....x..x....... 32M3D27M 50/59 84.7% 59/94230402 0.0% 3/59 5.1% 6325646 NA +3538 chr4 + 190214555 39576653 39576652 39576711 59 TGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ...:.....:.:.......:.:........x.x.....x...x.....x..x....... 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 6325650 NA +3017 chr4 + 190214555 39576664 39576663 39576702 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 14784038 NA +3087 chr4 + 190214555 39576670 39576669 39576722 53 ATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077444 47077443 47077496 47077444 47077443 47077496 53 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT .......:......x.....x:...x:x...:.xx.................. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -7500774 -86729628 +3953 chr4 + 190214555 39582528 39582527 39582606 79 GTGGTGCACGGCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -36450673 -57779729 +3507 chr4 + 190214555 39590673 39590672 39590741 69 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGTAGGTTG chr4 + 94230402 76033206 76033205 76033274 76033206 76033205 76033274 69 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..:.x....:.:...........::........x.xx.x...x::...........:..x:x.:..:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -36442533 -57787869 +3269 chr4 + 190214555 39599791 39599790 39599864 74 GCGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATTGCTTGAACCCGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x.:....:...........::........x.xx.x:..x::.........:.:.:x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36433413 -57796989 +3765 chr4 + 190214555 39603871 39603870 39603953 83 CATGGTGGTGCGCACCTGCAATCCCAGCTACTTGCAAAGTTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x..:.:.:...........x..:.:....x.xx.x...x.............:..x.xx:..:..:.. 11M2D70M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -36429326 -57801076 +3321 chr4 + 190214555 39611544 39611543 39611616 73 TGCACCTGTAATCCTAGCTACTCAGGAGGCTGACACAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTATAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.:.......::::.......xx.xx.x...x.:...........:..x.xx:..:.:... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -36421661 -57808741 +3115 chr4 + 190214555 39616635 39616634 39616682 48 TACATTTAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAGAAAAGCA chr4 + 94230402 34035128 34035127 34035175 34035128 34035127 34035175 48 TACATTTGAAAAAAAAAAAAAAGGAAAGAAATTTAAAAAACCAAAGCA .......:...............:.......xxx......xx...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 5581507 NA +3077 chr4 + 190214555 39624693 39624692 39624765 73 GTGTCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTAGGAGGCGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...:x.x....:.:...........::........x.xx:x...x::........:..:..x:xx:..:..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -36408511 -57821891 +3735 chr4 + 190214555 39630722 39630721 39630804 83 CATGGTGGTGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--......:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -36402475 -57827927 +3596 chr4 + 190214555 39636042 39636041 39636115 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTAAGGCTGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::.....:..x.:x.x...x...........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36397162 -57833240 +3426 chr4 + 190214555 39640658 39640657 39640722 65 GGTTTTGTTGTTGTTGTTTTTGTTGTTGTTGTTTTTGTTTGTTTTTGAGATGGAGTCTTGCTCTG chr4 + 94230402 89868341 89868340 89868405 89868341 89868340 89868405 65 GGTTTTGTTGTTGTTGTTTTGGTTCTTTTTTTGTTTGTTTGTTTTTATGGAAGATTATTGTCTTG ....................x...x..x..x.x.............:x.:x:..x.x...:::.. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -50227683 -44002719 +3101 chr4 + 190214555 39644526 39644525 39644592 67 CAAGACGCTGTCTCAAAAAAAAAAA-AATGTATATATATATATGTATGTGTGTGTGTGTATATATATA chr4 + 94230402 60568546 60568545 60568613 60568546 60568545 60568613 68 CAGTACCTTTTCTAAAAAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTATA ..:x..x:.x...x.....:.....-.:..xx....:......:.x.x.............:.:.... 25M1I42M 51/67 76.1% 68/94230402 0.0% 1/67 1.5% -20924020 -73306382 +3137 chr4 + 190214555 39648079 39648078 39648142 64 AGACTCTGGAGGGGTTTTTTGTTGTTGTTGTTTTTTTTTTCTGAGACTTCATCTCAAAAAAAAA chr4 + 94230402 88545869 88545868 88545932 88545869 88545868 88545932 64 AGACTTCGGGGTGGATTTTTGTTGTTGTTGTTTTTCCCTTTTTGTTCTCTCTTTAAAAAAAAAA .....::..:.x..x....................:::..:.x:xx..::x.:.x......... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -48897790 -45332612 +3488 chr4 + 190214555 39650661 39650660 39650717 57 GATAATTTTGTATGATTTAGAGGTGGGATTTTTGTTTGTTTGTTTTTTGTTTTTTTT chr4 + 94230402 53858830 53858829 53858886 53858830 53858829 53858886 57 GATAATTTAGAATAATGGTGAGGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTT ........x.x..:..xxx......x.x.................x........... 57M 48/57 84.2% 57/94230402 0.0% 0/57 0.0% -14208169 -80022233 +3392 chr4 + 190214555 39667438 39667437 39667516 79 GTGGCGGATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x.:..--...:.:...........::........x.xx.x...x.x...........:..x:xx:..:..:.. 11M2D66M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -36365763 -57864639 +3387 chr4 + 190214555 39668562 39668561 39668633 72 TGCACTTGTAGTCATAGCTACTTGGGAAGCTGAGGCGAGAGGATTGCTTGAGCCTAGGAGGTTCAGGCTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....x......:x:.........::.:......x.xx.x.:.x::.....:..:..:..x..::.....:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36364643 -57865759 +3001 chr4 + 190214555 39680197 39680196 39680271 75 TTTTGCTGCTAATCATGTAGGTGGCCACAGTTTGGGTTTTTTTGTTTTTCTGTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 53284403 53284402 53284477 53284403 53284402 53284477 75 TTTCGTTGCTTAATTTGGAAATAATAGCTGTTGCAGGTTTGTTGTTTGTCTGTTTTTATTGTTTTGTTTTGTTTT ...:.:....x.x:x..x.::.:::x:.x...xx:.x...x......x.......x.x................. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -13604206 -80626196 +3147 chr4 + 190214555 39680595 39680594 39680666 72 GTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGAAGGAGAATCACTTGAACCAGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:............:........xxxx.x...x..........x:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36352611 -57877791 +4438 chr4 + 190214555 39680720 39680719 39680861 142 GTCTCAAAAAAAAAAAAAAAAAAAAAAGAATTGCATAAAAATATCA------TAG------------TATTTTTAAGAAAGTT---TACAAATTTGTGTTGGGCCACATTCAAAGCTGTCCTGGCCTGCATGTGGCCTGTGGGCTATGGGTTGGACAAGCTTG chr4 + 94230402 45575587 45575586 45575745 45575587 45575586 45575745 159 gtcttaaaacattaagagaaaaagagaga--tgaacaaaaacataaaaccagtaggatatgtgaccttgtttttgtgaaaataacacaccaatttaggttG--CCAAATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTG ....:....x.xx..:.:.....:.:...--..x.:.....:..x.------...------------.:.....:x....:.x---:..x.....:x....--...x...xx.......x....x.:x.......:......:::..........:.x..:.. 29M2D15M6I3M12I16M3I15M2D60M 103/138 74.6% 159/94230402 0.0% 25/138 18.1% -5894867 -88335535 +3233 chr4 + 190214555 39681482 39681481 39681579 98 GAAGAAATAGGGAA-----------AAGTGCATCTATTCAATTTCTTCCTAGAAGGAGAAGTCTATGTTAATTTTATTTATTTATTTGTTTTTATTTTTATTTTTATTT chr4 + 94230402 49231047 49231046 49231155 49231047 49231046 49231155 109 GAAGAAATAGTAAATTGTTCTTCTACAGGACAGCTATAGACTTCTTTCGTGGTAATTAAATCCTATTTTAACTTTATTCAATCATTTCTTTTTATTTCTATTTAAATTT ..........x:..-----------x..x:..x....xx.x..::...x.:.x.:xx:..x:....x....:......:.x.:....x.........:.....xx.... 14M11I84M 69/98 70.4% 109/94230402 0.0% 11/98 11.2% -9549565 -84680837 +3103 chr4 + 190214555 39689737 39689736 39689810 74 GTGCACCAGTAATCCCAGCTACTCAGGAGTCTGAGGCACGAGAATCGCTGGAACCCGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......xx...:.:.........::::..x.....x.x:.x...x.:..x......:.:..x:xx:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36343467 -57886935 +3045 chr4 + 190214555 39689871 39689870 39689923 53 AAAAAAATATATATATATATATATATATATATAAATATATATATACACATATG chr4 + 94230402 60163462 60163461 60163514 60163462 60163461 60163514 53 AGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACACCTG .::......x............:.:...........:.:x.x.:.....:x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -20473591 -73756811 +4159 chr4 + 190214555 39691370 39691369 39691443 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% -36341834 -57888568 +3389 chr4 + 190214555 39691654 39691653 39691737 84 ACATAGTGGTGTGCACCTGTTGCCCTAGCAACTTGGGAGGCTGAGGAAGGAAGATCACTTGAGCCCAGGAGGTTGAGGCTACAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.......--...x...x.::.:...x.....::........xxxx.x::.x.......:.....:..x..x:....::.. 11M2D71M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -36341542 -57888860 +3237 chr4 + 190214555 39693529 39693528 39693600 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGAATCTCCTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x:xx.x...x.x.:.......:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36339677 -57890725 +3511 chr4 + 190214555 39700351 39700350 39700410 60 AAACAGACAGGTTTTTTGTTGTTTTTGTTGTTTGTTTGTTTTGTTTTGTTTTGTTTAGAA chr4 + 94230402 23574651 23574650 23574710 23574651 23574650 23574710 60 AAATAGTGAGATTTTTTGTTGTTCTTGTTGTTTATTTGTTTTGCTCTGTAGTTTTCAAAA ...:..xx..:............:.........:.........:.:...xx.x..:.:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 16125700 NA +3039 chr4 + 190214555 39700352 39700351 39700406 55 AACAGACAGGTTTTTTGTTGTTTTTGTTGTTTGTTTGTTTTGTTTTGTTTTGTTT chr4 + 94230402 84306028 84306027 84306082 84306028 84306027 84306082 55 AACAGCCTGCTGGTCTGTTGTTTTTGGTGACTGTTTGTTTTGCTTTACTTTGTTT .....x.x.x.xx.:...........x..x:...........:...::....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -44605676 -49624726 +3399 chr4 + 190214555 39703707 39703706 39703789 83 CATGGTGGTGAGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCGGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--......:...........::........x.xx.x...x::........x:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -36329490 -57900912 +3528 chr4 + 190214555 39716858 39716857 39716927 70 CACAGCGGTGTGCACCTGTAATCCCAGCTGCTTGGGAAGCCGAGACAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:....--...x....:.:......:....::.:..:...x.xx.x...x...........:.:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -36316339 -57914063 +3047 chr4 + 190214555 39728553 39728552 39728631 79 TCCAAAT-ATCTTTTTCTTCCTTTCTTCTTTCCTTTCTTTCCTTTTCCCTTTCCCTCCCCTTCCTCCTGCCTTTCCTTTT chr4 + 94230402 49559633 49559632 49559712 49559633 49559632 49559712 80 TCCAAGTTGTTTTTTTCTGCATTATTCCTTCCCTTTCCTTGCTTTACCCTTTCCTTCTCTCTCGCCCGTAGGTTTCTTTT .....:.-:.:.......x.x..x:.:...:......:..x....x........:..:.::..x:..xxxxx..:..... 7M1I72M 55/79 69.6% 80/94230402 0.0% 1/79 1.3% -9831080 -84399322 +3464 chr4 + 190214555 39731553 39731552 39731624 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTCCTTGAACCCAGGAGTCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x:x...........:..::xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -36301653 -57928749 +3122 chr4 + 190214555 39738653 39738652 39738697 45 TTTGTGTGTGTTTTTTGTTGTTCATTTTTTGATTGTTTGTTTTTT chr4 + 94230402 28945668 28945667 28945712 28945668 28945667 28945712 45 TTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTT .............x........xx.x.....x............. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 10792985 NA +3014 chr4 + 190214555 39747778 39747777 39747820 43 GGCTAATTTTGTTGTTGTTGTTGTTTTCTTTTTTTTTTTTTTG chr4 + 94230402 90203140 90203139 90203182 90203140 90203139 90203182 43 GGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTG ..:.xx....................xx............... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -50455362 -43775040 +3527 chr4 + 190214555 39756317 39756316 39756470 154 GGTTATGAGCAAATTACCTAAAGTCTGTGTGCCTTAGTGTCCTCATCTGCAAAATGG-GTTGA-------TACCCACTTCATAGAG--CTCAGAGGATTAAATAAGTTAC--TTTATGTAATTCCCTTAGAAT-AGAGCTTTGCTTTTGT--TTTTGTTTGTTTGTTTT chr4 + 94230402 83501141 83501140 83501309 83501141 83501140 83501309 169 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGTTTATTCAGGATCTTCAGAGTGAGTACATAATATTAGTAGTCTTGCTTCTTTATTTT .::.x..:.........:...xx.x.:.......:...x.:.:..:...:.......-.:...-------....:..:...:..:.--x.::x::.::.....x.:..x.--.....x:.:xx:.:.:...:.-..x:.x.x::x..x..--.:...:..x...:.... 57M1I5M7I16M2I22M2I21M1I16M2I17M 102/154 66.2% 169/94230402 0.0% 15/154 9.7% -43744824 -50485578 +3287 chr4 + 190214555 39756977 39756976 39757067 91 TTTTAAGCTATGTTTTTTTGGGTGTTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTGAGACAGAGTTTCACTCTTGTCACC chr4 + 94230402 86290058 86290057 86290147 86290058 86290057 86290147 90 TTTTATGCT-TCTTTTTCTGTTTCTCCTCTCCTTGTTTGTTGTTTTTTGTTCATTTTCCTCTGATTGAGACACATCTGCACCATTGTCTCC .....x...-.x.....:..xx.x.::.:.::......x............:x..x.::.:.xx........x.x:.x...:x.....x.. 9M1D81M 63/90 70.0% 90/94230402 0.0% 1/90 1.1% -46533081 -47697321 +3251 chr4 + 190214555 39756984 39756983 39757036 53 CTATGTTTTTTTGGGTGTTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTT chr4 + 94230402 43996145 43996144 43996197 43996145 43996144 43996197 53 CTATACTTCTTAGGGTTTTCTGTGTGTGTTTTTTGTTTTTTGTTTTTTGCTTT ....::..:..x....x..:.x.x.x.......................:... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -4239161 -89991241 +3508 chr4 + 190214555 39758538 39758537 39758607 70 CATGGTGGTGCATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........--.x....:.:...........::........x.xx.x...x.:........::.:.. 12M2D56M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -36274659 -57955743 +5388 chr4 + 190214555 39761007 39761006 39761177 171 ACAATGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGGATTGCTTAAGACCAGCAAGTCTGGGCTGAAGTGTGCTATGCCAGTCAGGTGTCCACATTAAGTTGGGCATAAGTATGGTGACCTCTTAGGAACAGAGGACCACCAGATTGCCTAAGGAGA chr4 + 94230402 76033198 76033197 76033365 76033198 76033197 76033365 168 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGA-GAGCTTGGGGTCACAAGGCTGTCTGAGGAGA ...:........:--......:.........::::........x.xx.x.:.x::...:.:x....x.:x.:.......x..x::::x......:x...:...x::.x:....::x.x:x:x..:........:x.xx.-..:.xx:..::...x..::..:..:...... 13M2D124M1D31M 107/168 63.7% 168/94230402 0.0% 3/168 1.8% -36272191 -57958211 +3314 chr4 + 190214555 39765384 39765383 39765466 83 CATGGTGGCGTGAGTCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTTGGAGGATCGCTTAAGCTCAGGAGGTTGAGGTTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.::x..--.....:...........::........x::x.x.:.x.:...:.:.:...:..x..x:..:..x.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36267813 -57962589 +3587 chr4 + 190214555 39772444 39772443 39772517 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTATGAGAATCACCTGAGCCAAAGAGGTCAAGGCTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x:x..x...x...:...:..x.::..x.:x:....::.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -36260760 -57969642 +3080 chr4 + 190214555 39773328 39773327 39773397 70 CATGGTGGCATGTGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--..::.x......:...........x:........x.xx.x...x::........x:.:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -36259869 -57970533 +3218 chr4 + 190214555 39788556 39788555 39788625 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:...........:.........x.xx.x...xx:.x.......:.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -36244641 -57985761 +3018 chr4 + 190214555 39791653 39791652 39791708 56 ATATATACACACACATATATATATACACACATATATACACATATATATACATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:.:.........:..:x.:.......x........::......:..:x..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -34734421 -59495981 +3032 chr4 + 190214555 39791659 39791658 39791729 71 ACACACACATATATATATACACACATATATACACATATATATACATATATATGCATATATATGTATATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .......:..x:.:..::.x......::.....x.x....:..:..x.:.:..::.....:::.::.::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 17191461 NA +3009 chr4 + 190214555 39791675 39791674 39791730 56 ATACACACATATATACACATATATATACATATATATGCATATATATGTATATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x......:.:.:...::x.:...:...x......:.:...........x..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -34734399 -59496003 +3372 chr4 + 190214555 39792862 39792861 39792935 74 GTGCGCCTGTGGTCCCAGCTACTAGGGAGGCTGAGATTGGAGGATCACTTGAGCCTGGGAAGTCGAGGCTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x...:..:.........x.::........x::x.x.:.x.......:..::.:.:x.:x:......:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36240342 -57990060 +3051 chr4 + 190214555 39794930 39794929 39795001 72 GCACCTACAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.::...:...........::........x.xx.x...xx:.x.........:..x.xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36238276 -57992126 +3159 chr4 + 190214555 39798298 39798297 39798412 115 TGAGTCTTGCTTTTTAATT----CAGTCTGACAATCTCTCTTT-TAGCTGATGTGTTTAGACCAT-----------TTCCATGCTTTTTTTAGTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 37743609 37743608 37743732 37743609 37743608 37743732 124 TGAGTTTCTATTTTTGATTGGCCCGGTCTCACACTATAACTTCATAGCTA-------TAGGCCAACAAATTTCAAATTCCATCTTTTTTGTAGTGGATATTTTTCACTCTTTTTTTTTTTTTCTTTATTTT .....:.:xx.....:...----.:....x...x.x.xx...:-.....:-------...:...x-----------......x:.....x....:.x.x.....:x:.:.............:...x.... 19M4I20M1I6M7D8M11I55M 81/108 75.0% 124/94230402 0.0% 23/108 21.3% 2054689 NA +3015 chr4 + 190214555 39798347 39798346 39798411 65 GTTTAGACCATTTCCATGCTTTTTTTAGTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72881867 72881866 72881931 72881867 72881866 72881931 65 GCTTAGCCTGTTTTTCTGGTTAGCTGAGCAGCTTGTTTTTTTTTTTTTGTGCTTTTTTTTTTCTT .:....x.::...::x..x..xx:.x..:.....x.............x.x:..........:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -33083520 -61146882 +3118 chr4 + 190214555 39801924 39801923 39802001 78 ACCTTATCTCTTTTCTTTCGCTCTTTATTTACTTTTTTTTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGG chr4 + 94230402 72471339 72471338 72471416 72471339 72471338 72471416 78 ACGTTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGG ..x....:.:..:....x.:xx:...x..:xxxx...:..x.....:..::.::.....x....:........:.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -32669415 -61560987 +3195 chr4 + 190214555 39801924 39801923 39801999 76 ACCTTATCTCTTTTCTTTCGCTCTTTATTTACTTTTTTTTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTT chr4 + 94230402 58577643 58577642 58577718 58577643 58577642 58577718 76 ACCTAATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT ....x....:....:..:.x.x::x.:...x.x...x:..::x..:........::...x......x...x..... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -18775719 -75454683 +3304 chr4 + 190214555 39803672 39803671 39803733 62 GAATCAATCCCATTTTGTTATTTTTTTCTTTTGTCTTCTTTCTTTCTTTCTTTCTTTTTTTT chr4 + 94230402 65932352 65932351 65932413 65932352 65932351 65932413 62 GAATCCATATATTTCTGTAATTTTTTTCTGTTATCTCCTTGCTTTTTTTTTTTGTTTTTTTT .....x..x:xx..:...x..........x..:...:...x....:...:...x........ 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -26128680 -68101722 +3057 chr4 + 190214555 39806712 39806711 39806795 84 AAAAAAACAAAAACAAAAACAAACAAACAAAAAACCTAAACTAAACTAAAAATACAAAAATTAGCTGGGCCTGGTAGTGCATGA chr4 + 94230402 63010816 63010815 63010896 63010816 63010815 63010896 81 AATAAAACCCAAACAAAAACAAACAAACAAAAAACCCAACCTACTTAAATGCTATGGAAA-CAGTT--ATCTGGCAATGAATGA ..x.....xx..........................:..x...xx:x..x:x..:::...-:..:.--::....:.:..x.... 60M1D5M2D16M 59/81 72.8% 81/94230402 0.0% 3/81 3.7% -23204104 -71026298 +3091 chr4 + 190214555 39806715 39806714 39806756 42 AAAACAAAAACAAAAACAAACAAACAAAAAACCTAAACTAAA chr4 + 94230402 74678180 74678179 74678221 74678180 74678179 74678221 42 AAAATTAAAACAAAAACAAACAAACAAAAAACCCAAGCTTAA ....:x...........................:..:..x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -34871465 -59358937 +3023 chr4 + 190214555 39806914 39806913 39806995 82 CTGTTTCAAAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 86730441 86730440 86730522 86730441 86730440 86730522 82 CCATTTTCAAGACGAAAGAAAAAAAAGGAGGCAGGTTAAGAGCAAATGAAGAAAAGGAGAGCAAAGGAGAAAAAGCAGGAAA .::...:x..:.x:...::...:....:...x:::xx....:x:..x...:.:..:.....x:..:..:.:....x.:.... 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% -46923527 -47306875 +3149 chr4 + 190214555 39806915 39806914 39807006 92 TGTTTCAAAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAG--------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 36796861 36796860 36796960 36796861 36796860 36796960 100 TATTTAAAAAAACAAAAGAAAGTTTTAAGGAAAAAAAAAAAAGGAGGCAAAAGAAGCAACAGACTTCCCTAAAAGGAAAAGGAATTAAAAATTGAAGGAA .:...x......x.........xxxx.....:..:...:....:.:.x...::...x:.x..--------...:::.:..:...xx...:.xx...:... 62M8I30M 63/92 68.5% 100/94230402 0.0% 8/92 8.7% 3010054 NA +3325 chr4 + 190214555 39806929 39806928 39807092 164 AAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAA chr4 + 94230402 24562506 24562505 24562665 24562506 24562505 24562665 160 AGACAAAGCAGTAAGCAAAGGAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATAT---GAGACTGAAAAGCCAAAACAGAAACAAA-ACAGATCAAAAGAAAAAACTAAA .:.x....x.:x...x.:.:......:.x::.:.x::x.x:.:x:.:x::...:...:...:.....xx.::...:....:.x....:::....x:x:..xx.x..x.x---....xx....::xx:...x.....x...-.x...xx..:...:....xx... 109M3D28M1D23M 96/160 60.0% 160/94230402 0.0% 4/160 2.5% 15244423 NA +3804 chr4 + 190214555 39806943 39806942 39807093 151 GGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAA---GAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAAA chr4 + 94230402 84536572 84536571 84536725 84536572 84536571 84536725 154 GAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAA .:.:::........:...x..x.:...x..::..x:.::..:....::.:.::..:..:.....:xx.x.x.:x...:xx..x.:xx:...x.xxx..........x.:.x....:::---.::..:....:.xx..:.::.x:....xx.... 118M3I33M 90/151 59.6% 154/94230402 0.0% 3/151 2.0% -44729629 -49500773 +3504 chr4 + 190214555 39806969 39806968 39807087 119 AGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAA------------AGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ...:.:.:...x........x......:..:....:x.xxxx::..x:x..x......::.x:.:..x.xx.:..xxx:...:..------------........x....:.x:...:....:.:.:.... 85M12I34M 78/119 65.5% 131/94230402 0.0% 12/119 10.1% -14204624 -80025778 +3328 chr4 + 190214555 39806973 39806972 39807094 122 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA--------AAAGAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA ...:...:...x........x......:..:....:x.xxxx::..x:x..x...::.::.x:.:..x.xx....xxx:...:..--------.x:..:.:....x....:.x::..::.....:..... 85M8I37M 77/122 63.1% 130/94230402 0.0% 8/122 6.6% -14204620 -80025782 +3479 chr4 + 190214555 39806974 39806973 39807135 162 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------------------------------AAAGAAAAGAAAGAAAGAA-AGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAAAAGGAAGGAAGGAAGAAAGGA-AGGGAGGGCGGGCCAGCCAGCT chr4 + 94230402 75176340 75176339 75176531 75176340 75176339 75176531 192 GAAAAACAAAGAAGGAAGGGCAAATAGAAG--AAGCAAGAAAACAATGCATTATTTCAGATATTACAACTACTCCTTAGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAATGCACACCACCT ..:...x......:...:.:x.:.x....:--...x......:x..x------------------------------.:.:x..:x..xx.:x...-....x.x...:x.:.......:....:.:...:x.....xx:.........::..x....:..xx..x:.:...-.:...:..x:x..xx:...x.. 30M2D15M30I19M1I74M1I22M 107/160 66.9% 192/94230402 0.0% 34/160 21.2% -35369366 -58861036 +3245 chr4 + 190214555 39807007 39807006 39807091 85 AGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAA---GAGAGAAAAAGAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAA-ATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...x..:..-.x..:..xx.x...x.........:..:..........:...x..:.xx.:......x....---:..:..x..x... 9M1D62M3I13M 63/84 75.0% 87/94230402 0.0% 4/84 4.8% -35434500 -58795902 +3303 chr4 + 190214555 39807011 39807010 39807099 89 AGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAAAAGGAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAA-ATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:..-.x..:..xx.x...x.......:....:............:.x..:.xx.:.....:x:.:.x.x..:.:.x..x.... 9M1D79M 62/88 70.5% 88/94230402 0.0% 1/88 1.1% -35434496 -58795906 +3116 chr4 + 190214555 39807019 39807018 39807122 104 AGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAAAAAGAAAAAGGAAGGAAGGAAGAAAGGAAGGGAGGGC chr4 + 94230402 51148379 51148378 51148479 51148379 51148378 51148479 101 AGAAAGAAGA---AGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGC ........:.---..xx.x.:.....:...:.........x....:xxx....xx:...x.::.x.x::..::x:..::.::..::.:....:.:.....x:.. 10M3D91M 64/101 63.4% 101/94230402 0.0% 3/101 3.0% -11341360 -82889042 +3240 chr4 + 190214555 39807756 39807755 39807838 83 CGTGGTGGCACATGCCTGTAATCCCAGCTATGTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTATAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:.......:x..::........x.xx.x...x.:.........:.:..x.xx:..:.:... 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36225441 -58004961 +3202 chr4 + 190214555 39807886 39807885 39807973 88 CTTCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAGAAAGAAAGAAACAAACAAAAGAAAGAAAGACACTTGGAGTCA-AAGAAA chr4 + 94230402 41136171 41136170 41136259 41136171 41136170 41136259 89 CCTCTAAGAAAGACAAACTAACAACCAGGAAAAAAAAAAGAAAAAAAGAAACTTGGAAACAAAAGCAAAGGACTTGAATTAATAAGAAA .:...x.:...:.x...xx..x..xx..:.......:......:........xx:x...x:....x..::x.....:.x.x.-...... 82M1I6M 62/88 70.5% 89/94230402 0.0% 1/88 1.1% -1328285 -92902117 +3025 chr4 + 190214555 39808921 39808920 39808970 50 TGCAAGATTGATAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 43946864 43946863 43946913 43946864 43946863 43946913 50 TGCAAGATCAGTGGTTCCATTATTGTTGTTTCTTTTTTTTTTTTTTTTTT ........:::.:....:x..x..x..x...:.................. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -4137943 -90092459 +3709 chr4 + 190214555 39811350 39811349 39811428 79 GTGGCACGTGACTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::.::.--......:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -36221851 -58008551 +3170 chr4 + 190214555 39838583 39838582 39838665 83 CATGGTGGCTTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTAAGCCTGGGAGGTTGAGGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x......:...........::........x:xx.x.:.x::...:.:..::.:..x..x:....::.. 8M2D73M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -36194614 -58035788 +3032 chr4 + 190214555 39842910 39842909 39842959 50 TATATATATATATATATATATATATATATTTTAAGAGACAGGGTCTTAGG chr4 + 94230402 27005996 27005995 27006045 27005996 27005995 27006045 50 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAGCTTTGGG ...........x.......x.....:.....x:.....x..:.::..:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 12836914 NA +3000 chr4 + 190214555 39860466 39860465 39860508 43 AAAAAAAAAAAGGAAAAAAAGGAAAAAAAGAAAGGAAATTAGT chr4 + 94230402 2216138 2216137 2216180 2216138 2216137 2216180 43 AAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAAATTGGT ..:....:.:..:.:..........:....:.........:.. 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 37644328 NA +3166 chr4 + 190214555 39861318 39861317 39861387 70 AGTGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGATGGGAGAATCACTTGAACTAGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......-----...x......:.........:.::........x:xx.x...x.........:x:.:.. 7M5D58M 50/65 76.9% 65/94230402 0.0% 5/65 7.7% -36171882 -58058520 +3097 chr4 + 190214555 39864001 39864000 39864072 72 GCACTTGTAGTCCCAGCTACTTGGGAGACTCAGGCAGGAGAACTGCTTGAACCTGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::..:..x..x.xx.x...x::........::::..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -36169205 -58061197 +3322 chr4 + 190214555 39873905 39873904 39873986 82 CATGGTGGTGGTGCCTGTACTCTCAGCTACTTGGGAGGCTGAGGCAGAAGGACTGCTTGAACCTAGGAATTCGGGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......-::.x....x.::..........::........x.xx:x.:.x::........:..:.::.:x......:.. 10M1D71M 55/81 67.9% 81/94230402 0.0% 1/81 1.2% -36159292 -58071110 +3390 chr4 + 190214555 39905787 39905786 39905899 113 AGGAAGATAGGGAG--AGAGGCAGGGAGAAAAGGAGGGAAGAAAGCAAGGAAGAAGAAAAGGAAAGGAGGGAAGAAAAAAAGGAAAGGAGGCAGGGAGAAAGGAAGTTAGAAAAA chr4 + 94230402 49044692 49044691 49044803 49044692 49044691 49044803 112 AGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAG---CAGAAAACTGAGACTAGGAAGA ..:....:.:.x..--...:...xx:..x:.:::........:xxx...:.........:.x:..::.x.:.......:..:...x.:..---x:..:..xx..:::...:..:. 14M2I74M3D22M 71/110 64.5% 112/94230402 0.0% 5/110 4.5% -9138905 -85091497 +3032 chr4 + 190214555 39911010 39911009 39911076 67 TGTAGTCCCAGCTACTTGGGAGGGTGAGGTGGAAGGACTGCTTGAGCCCAGGAGGTCGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::...x....x:xx:x.:.x::.....:.....:..x.:x:.....:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -36122201 -58108201 +3412 chr4 + 190214555 39916708 39916707 39916808 101 ATAGAAAAATTATATGGGCATGGTGGTTTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGGGGCAAAGGTTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATA----CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..::..x...----..::.....--....x......:.........:.::........x.xx:x...x.:........::.::.x:xx:..:..:.. 14M4D9M2D72M 65/95 68.4% 95/94230402 0.0% 6/95 6.3% -36116475 -58113927 +3141 chr4 + 190214555 39924973 39924972 39925054 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGGACTGCTTGAACCCGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::........x.xx.x.:.x::.........:.:..x.xx::.:..:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% -36108228 -58122174 +3026 chr4 + 190214555 39930195 39930194 39930274 80 AACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTGTTTTTTGTTTTTTTTTTTT chr4 + 94230402 49768348 49768347 49768421 49768348 49768347 49768421 74 AACAGGATGA--TTTCAGCT----AAAAAAAAAAACAAAAAAAAAACCAACAGTTTACTGGTAGTGTGTTTTTTTTTTCT .....::...--:.:..x..----...........x..........xx..x.....x:.x..xx.x............:. 10M2D8M4D56M 58/74 78.4% 74/94230402 0.0% 6/74 8.1% -9838153 -84392249 +4035 chr4 + 190214555 39933281 39933280 39933416 136 GTATGTATTGTCAAGAATGGTGGCT---------TGCACTTACAATCTCAGCTACTTGGGAGGCTGAGACAAGATGACTGCTTGAGCCCAGAAGTTCTAGGCTGCAGTGAGCTATGATCATGCCAA---------TGCACT----------CCAGCCTGGTGAC chr4 + 94230402 76033171 76033170 76033328 76033171 76033170 76033328 158 GTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGAC .......x.....x...x..xx.x.---------.....x.::.:.::..........::........x.xx.xx:.x::.....:........:.:.:.....:..------.xx..x.......---------...x..----------.....x....... 25M9I73M6D13M9I6M10I13M 97/130 74.6% 158/94230402 0.0% 34/130 26.2% -36099890 -58130512 +3336 chr4 + 190214555 39934557 39934556 39934631 75 TGTGTTTTAATACCCTCTGGCTATTTATCTATTGCGGTCTTAGTATTTCTTTTTTTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 58155935 58155934 58156009 58155935 58155934 58156009 75 TGTGCTTTTATAGTTTTTATATATTTCTCTATTAATGTCCTCATATTTCCTTTTTTTTTTTTTTTTTGCTACTTT ....:...x...x::.:.:xx.....x......:xx...:.x:......:........:........x:.x:... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -18221378 -76009024 +3230 chr4 + 190214555 39939337 39939336 39939408 72 TGCGCCTGTAGTCCCAGCTACTCAAGAGAATGAGATGGGAGGATCGCTTGAACCTAGGAGGGTGAGGCTGTA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...:.x......:.........::.:..:x....x:xx.x.:.x.:........:..:..xx.x:....... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36093868 -58136534 +3116 chr4 + 190214555 39939798 39939797 39939849 52 AAAAAAACAAAAACAAACAAACAAAAAAACAGCTTTATTAAGGTATAGCTGA chr4 + 94230402 84790013 84790012 84790064 84790013 84790012 84790064 52 AAACAAAACAAAACAAACAAACAAAAAAACAGTTTAATTGCTGTATTGCTGA ...x...xx.......................:..x...:xx....x..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -44850215 -49380187 +3164 chr4 + 190214555 39943799 39943798 39943836 38 GTATCAAAAACAAACAAACAACAACAACAACAAAAAGA chr4 + 94230402 22215894 22215893 22215931 22215894 22215893 22215931 38 GCATTAAAAACAAACAAACAACAACAACAACAAAAAAA .:..:...............................:. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 17727905 NA +3686 chr4 + 190214555 39946784 39946783 39946855 72 GCACCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTCAACCCAGGAGGTGTGGATTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.:.........::........x.xx.x...x.:...x.......:..x.x...::..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -36086422 -58143980 +3196 chr4 + 190214555 39947432 39947431 39947493 62 AGAGAGACTGTCTGAAAGGGGGGAAAAAAAAGAGAGAGGAAAC-----ATGAAATAAACATGAGGGA chr4 + 94230402 20833026 20833025 20833092 20833026 20833025 20833092 67 AGAGAGAAGGCTTGAGAGGGGGGAAAAAAAAGAGAGAAAAAACTATATATGAAGTGTATATAATGAA .......xx.::...:.....................::....-----.....:.:x.:..:.x.:. 43M5I19M 48/62 77.4% 67/94230402 0.0% 5/62 8.1% 19114406 NA +3512 chr4 + 190214555 39950287 39950286 39950369 83 CACGGTGGGTCTCACCTATAATCCCAGCTACTTAGAAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGATTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....--:x...x.:..:.:..........::.........x.xx.x...x...........:.:..x.xx:.::..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -36082910 -58147492 +3286 chr4 + 190214555 39956354 39956353 39956422 69 ATGGTGGCTCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAACCCAGGAG chr4 + 94230402 76033198 76033197 76033264 76033198 76033197 76033264 67 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::....:x..:.--......:...........::........x:xx.x.:.x.:...........:.. 13M2D54M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% -36076844 -58153558 +3748 chr4 + 190214555 39958367 39958366 39958449 83 CATGGTGGTGTGCGCCTGTAGTACCAGCTACTCAGGAGGCTGAGCCAGGAGAATCGCTTGAAATCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::..--......x.........::::..........xx.x...x.:......x:......x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -36074830 -58155572 +5058 chr4 + 190214555 39977554 39977553 39977801 248 CGGGTCCCGCCG--------CCGCCGCCGCCGCCGCCCGCCCGCCCGGGAGCGGCGCTGGGGCTGGCGGTGCCGAGGAGGAGCAGCCGCCGCGGGGGGAGACGCGGGGCGAGTGAGCGCTGGGCGGGGAGACAGTGCCGCTCTCCGTCTGGCCGAGGAAGAGCAGCCTCGAAGGCTCCTCCGGGAGTGTGTGCGCTTGTGTCCGTCCGGGACCCCCGCGGCCCGCCCGCACGCACCTCGCGCCGGCCCGGACCGCC chr4 + 94230402 70975468 70975467 70975697 70975468 70975467 70975697 230 CGGACCCCACCGGCCTTTACCTCCCGCCGCT-CGGCTCGCTCGCTTCTGCCGGCCGCTGGGACGGG-GGAGCTGCTCGGCGGCGGCAGGAGTGGGGGAGGCTGCGCGG------AGCTCGCCGCGGGGACACAGTGCCGCTCTCCGTCCGGCCGAGGAAAAACAgcaccg-------cgtcgcgc-------cgcccctccccgccggg----cccgcagcgccgccccgcgcGTCCCGGGCGGGCTGGCACGGCC ...::...:...--------.:x.......:-.x..:...:...::xx.xxx.x.......:.x..-..x..:.xxx:.x:..:..x.xx.:.....::.x:...x..------...x.xxx.......x..................:..........:.:....x:..-------.x:..x.x-------...::x.x:...:.x..----.....:..x.xx..x.:...::.:..x..x...:x.x..x... 12M8I11M1D34M1D41M6D56M7D8M7D17M4D43M 149/222 67.1% 230/94230402 0.0% 34/222 15.3% -30997914 -63232488 +3390 chr4 + 190214555 39981541 39981540 39981605 65 CACTTAATTCTTCTGTGCCTCATTTTCTTCATCTGTAAAACAAGGATAATGATAGTATCTTCCTC chr4 + 94230402 20939881 20939880 20939945 20939881 20939880 20939945 65 CATTTAATTTCCCAGTGCTTTATTTTCCTCATCTATAAAAGCTGGATAACAGTGCTGTCTTCCTC ..:......:::.x....:.:......:......:.....xxx......:::.:x.:........ 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 19041660 NA +3575 chr4 + 190214555 39984821 39984820 39984892 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -36048385 -58182017 +3464 chr4 + 190214555 39986995 39986994 39987077 83 CATGGTGGTGGGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--:..x....:.:...........::........x.xx.x...x::.......:...:..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -36046202 -58184200 +3396 chr4 + 190214555 39989838 39989837 39989896 59 GCGCCTGTAGTTACAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x.......x..........::........x.xx.x...x::...........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -36043368 -58187034 +3299 chr4 + 190214555 39990154 39990153 39990214 61 GTGCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGTAGAATCGCTTGAAACCCGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:...........:.........x.xxxx...x.:......x..x.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -36043050 -58187352 +3492 chr4 + 190214555 39990454 39990453 39990525 72 GCGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........x:........x.xx.x...x::...........:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -36042752 -58187650 +4115 chr4 + 190214555 39991178 39991177 39991297 120 AATGTCATTATAGGCCGG-GCACAGCGGCTCACGCCTGTATTCTCAGCTACTTGAGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033177 76033176 76033289 76033177 76033176 76033289 113 AATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ........x.x...x:.:-:.....:..:x....--....x.::...........:........x.xx:x...x.............:..x:xx:..:..::.------..x..x...... 18M1I15M2D67M6D12M 82/112 73.2% 113/94230402 0.0% 9/112 8.0% -36041999 -58188403 +3201 chr4 + 190214555 39994475 39994474 39994531 57 AAAAACAACAACAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAA chr4 + 94230402 1046818 1046817 1046874 1046818 1046817 1046874 57 AAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAA ....:x:...x........:......:.......:xx..:....:..::....:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 38947657 NA +3580 chr4 + 190214555 40003355 40003354 40003433 79 GTGGTGTGCGTCCGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::...--...:.:...........::........x.xx.x...x:.........::.:..x.xx:..:..:.. 11M2D66M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -36029846 -58200556 +3031 chr4 + 190214555 40005243 40005242 40005301 59 CCTTTTTGTGTGCTAATTTCTTTTTGTTTTGCTATATTTCTTCTTATCTCTTTTTTTTT chr4 + 94230402 48601741 48601740 48601799 48601741 48601740 48601799 59 CCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTTTT .....x.x.:x.x..x.........x....x....x...:....:...:.::....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -8596498 -85633904 +3239 chr4 + 190214555 40012002 40012001 40012073 72 GCACCTGTGATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...::.x...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36021204 -58209198 +3200 chr4 + 190214555 40012475 40012474 40012544 70 CATAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....:.x::.--......:...........::........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -36020722 -58209680 +3715 chr4 + 190214555 40012791 40012790 40012874 84 ACGTGGTGGTGGGCGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::......--.:.x....:.:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 11M2D71M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -36020405 -58209997 +3431 chr4 + 190214555 40013508 40013507 40013588 81 CGGTGGCGCATGACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGGGGCGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:...:.--....:.:...........::........x.xx.x...xx:...........::.x:xx:..:..:.. 12M2D67M 56/79 70.9% 79/94230402 0.0% 2/79 2.5% -36019691 -58210711 +3113 chr4 + 190214555 40019573 40019572 40019608 36 CCAAAAAAAAAAAAAAAAAAGAGAGAGGGAGAGAAA chr4 + 94230402 75300454 75300453 75300489 75300454 75300453 75300489 36 CCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ...........................:......:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -35280881 -58949521 +3211 chr4 + 190214555 40019575 40019574 40019626 52 AAAAAAAAAAAAAAAAAAGAGAGAGGGAGAGAAATCTATTTCCACTCCCAGA chr4 + 94230402 75300458 75300457 75300509 75300458 75300457 75300509 52 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATCATCTGCAGA ................:........:.........::.x.x:..:::x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -35280883 -58949519 +3399 chr4 + 190214555 40020023 40020022 40020101 79 GTGGCACACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAGTCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::...:.--...:.:...........::........x.x..x...x.......::.::.:..x:xx:..:..:.. 11M2D66M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -36013178 -58217224 +3390 chr4 + 190214555 40022665 40022664 40022747 83 CGTGGCGGCACATGCCTGTAATTCCAGCTACTTGGGAGGCTGAGTCATTAGAATCAGTTGAACCTGGGAGTTAGAGGTTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.:..::..:.--....:.............::........:.x.xx...x..x.......::.:..:.xx:..:.::.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -36010532 -58219870 +3364 chr4 + 190214555 40026054 40026053 40026136 83 CATGGTGGTGCTTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......x:.--....:.:...........::........x.xx.x...x::........::::..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -36007143 -58223259 +3897 chr4 + 190214555 40032700 40032699 40032830 131 AGCATATTGTATTAGTTACATATATATGTGTATATGTATGTGTGTGTATATATACACATATGTGTATATACGTATATACACATATGTCTATACACGTATATACAAATGTC--------TATACACGTATATATACAAAT chr4 + 94230402 85834513 85834512 85834647 85834513 85834512 85834647 135 AGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATAC----ATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT ..x..:.x..x.x:...x:x...x:..x...:.x...:.........:.:...xx.::..x.::..:...:...x....----....:...:...::...:...x...x.--------.x.x.x:x.:...:....... 79M4D27M8I21M 86/127 67.7% 135/94230402 0.0% 12/127 9.4% -45801813 -48428589 +3100 chr4 + 190214555 40033031 40033030 40033092 62 GTGTATATATATACACGTGTATACACGTATATATATACACGTGTGTATACACACGTGTATAC chr4 + 94230402 47135178 47135177 47135239 47135178 47135177 47135239 62 GTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC ........::......:..x..xx::x...:..:..::.:.......:......::.:.:.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -7102147 -87128255 +3046 chr4 + 190214555 40035060 40035059 40035137 78 GTGGTGCGCATTTGCAGTCCCAGCTACTTGAGAGGTTGAGGTAGGAGGATTGCTTGAGTCTGGGAGGTCAAGGCTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .......:.:.--.:...:............:...:....x:xx.x.:.x::.....::.::.:..x.:x:.....:. 11M2D65M 51/76 67.1% 76/94230402 0.0% 2/76 2.6% -35998141 -58232261 +3166 chr4 + 190214555 40035937 40035936 40035981 45 TTTTTTCTTTCAGTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTG chr4 + 94230402 55690034 55690033 55690078 55690034 55690033 55690078 45 TTTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTG ...:...:..x.x.....x........:................. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -15654097 -78576305 +3007 chr4 + 190214555 40039719 40039718 40039756 38 CCATCAAAAAAAAAAAAAAGGAGAGAGAGAGAGAGAAA chr4 + 94230402 75300454 75300453 75300491 75300454 75300453 75300491 38 CCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...xx..............:.................. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -35260735 -58969667 +3707 chr4 + 190214555 40039918 40039917 40040000 83 CATGGTGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......::.--......:...........::........x.xx:x...x::...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35993279 -58237123 +5162 chr4 + 190214555 40056800 40056799 40056901 102 CGCGGCG--------GGCTTCTGCGCGGCTGCTCTTCCCCGGCCGGACGGAGAGCGGCAGTGTCTCCCCGCCGGGCGCGCTCGCCGTGTCTCCCCCGCGGCCGCAGCTGC chr4 + 94230402 70992086 70992085 70992195 70992086 70992085 70992195 110 CGCGGCGCGGAGCGTAGCCTCCTCCCGGTTGTTCTTCCCCGGCCGGACGGAGAGCGGAACTGTGTCCCCGCGGCGCGCGCTCGGCGGAGCCTCCCCCTCTCCGCTGCTGC .......--------:..:..:x.x...:..:.........................x.x...x.......x.x.........x..x:x.::....x:xx....x..... 7M8I95M 79/102 77.5% 110/94230402 0.0% 8/102 7.8% -30935286 -63295116 +3507 chr4 + 190214555 40074877 40074876 40074949 73 TGCACCTATAATCCCAGCTACTTGGGAGGCTGAGACATGAGAATTGCTTGAGCCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:..:.:...........::........x.x..x...x::.....:..::.:..x:xx:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -35958328 -58272074 +3013 chr4 + 190214555 40080306 40080305 40080340 35 AGCTGTATATATATATATATACACACACACATATA chr4 + 94230402 74671073 74671072 74671107 74671073 74671072 74671107 35 AGCTGTATATATATATATATACACACACACACACA ...............................:.:. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -34590767 -59639635 +3123 chr4 + 190214555 40091972 40091971 40092033 62 ACCTTGTGTCAAAAAAAAAA------AAAAAAAAAAAAAAAATTATATATATATATATATATATATAT chr4 + 94230402 88547295 88547294 88547362 88547295 88547294 88547362 68 ACCCCATAACAACCAGAAAACTCCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ...:::.:x...xx.:....------.................:........:...:.:.:.:..... 20M6I42M 48/62 77.4% 68/94230402 0.0% 6/62 9.7% -48455323 -45775079 +3602 chr4 + 190214555 40091992 40091991 40092045 54 AAAAAAAAAAAAAAAATTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:......:...:.:.:.::...:..........x..... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -45456428 -48773974 +3098 chr4 + 190214555 40091994 40091993 40092063 70 AAAAAAAAAAAAAATTATATATATATATATATATATATATATATATATATATAGCTGA-----------ATTTTATTTGCT chr4 + 94230402 85548420 85548419 85548500 85548420 85548419 85548500 81 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTTAGTTGTT .............:xxx.....:...:.:.:.::...:..........x....x.x..-----------......x...:. 58M11I12M 54/70 77.1% 81/94230402 0.0% 11/70 15.7% -45456426 -48773976 +3593 chr4 + 190214555 40109578 40109577 40109647 70 CATGGTGGTGCACACCTATAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.........:--.:....:............:........x.xx.x...x::........::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -35923619 -58306783 +3159 chr4 + 190214555 40142103 40142102 40142164 62 GGGAGAGGGAGAGGGAGACCATAGGGAGAGGGGGAGGGGGAGGGAGAGGGAGAGGGAGAGGG chr4 + 94230402 17021726 17021725 17021787 17021726 17021725 17021787 62 GGGGAAGGGGAAGGAAGTTTATATGAGGAGGGGGAGGGGGGGGAAGCAGAAGAGGCAGTGAG ...::....::...:..x::...x.::.............:..:..x:.:.....x..x.:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 23120377 NA +3380 chr4 + 190214555 40155261 40155260 40155334 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCGCTTAAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x.:...:....::.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -35877943 -58352459 +3593 chr4 + 190214555 40166549 40166548 40166618 70 CGTAGTGATGCATGCCAGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::....:....:.:--...:.:...........::...:....x.xx.x...x.............:.. 15M2D53M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -35866648 -58363754 +3330 chr4 + 190214555 40175950 40175949 40176019 70 CGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:....:.x:..--......:...........::..........xx.x...xx:.x.......:.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -35857247 -58373155 +3378 chr4 + 190214555 40179546 40179545 40179616 71 TATTATCCCCATTTAACAGTTGAGGAAACTGAGGCACATGGAAATTAAATAATTTTCCTGAGGTTACACAG chr4 + 94230402 82283118 82283117 82283188 82283118 82283117 82283188 71 TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAG ......xx:.....x.:.xx..:........:.:....x.x.:.....:.:.:.xx...:....:...... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -42103572 -52126830 +3001 chr4 + 190214555 40213334 40213333 40213379 46 CTTCTCTCTCTCTCTCTCTCGTTTCTCTTTTTTTTTTTTTCTCTCT chr4 + 94230402 53756249 53756248 53756294 53756249 53756248 53756294 46 CTTCTTTCTTCCTCTCACTGGTCTCTCTTTTTTTTTTTTTTTTCCT .....:...::.....x..x..:.................:.::.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -13542915 -80687487 +3624 chr4 + 190214555 40219272 40219271 40219354 83 CATGGTGGCACATGCCTGAAGTCCCAGCTACATGGGAGGCTGAGGCAGGCGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--..x...:........x..::........x.xx.:...x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35813925 -58416477 +3311 chr4 + 190214555 40226390 40226389 40226468 79 GTGGCGCATGCCTGTTATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCATGAACCCAGGAGGTGGAGTTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--...x:.............::........x.xx.x...x.:.x.........:..x.xx:.x:...:. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -35806811 -58423591 +3352 chr4 + 190214555 40229635 40229634 40229714 80 AAAAAAAAAAAAAAAAAGAAAGAAAGAAAACAAAAGCCCCCACGC-TTTAAAACTTTTAAC---------ACGAAAAGTTTTGAAGCTAC chr4 + 94230402 86598163 86598162 86598252 86598163 86598162 86598252 90 AAAAGAAAAAAAAAAAGGAGAGAAAGAAAACCAACGCACCCATACAGTGAAAACTTTTATTTAAGCTGCAACCAGAAGTGTTTAAACTGC ....:...........:..:...........x..x..x....::.-x.x..........x:---------..x.:....x..x..:..:. 45M1I15M9I20M 62/80 77.5% 90/94230402 0.0% 10/80 12.5% -46368528 -47861874 +3222 chr4 + 190214555 40233798 40233797 40233868 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x.:.......:::.:..x:xx:..:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -35799409 -58430993 +3691 chr4 + 190214555 40241751 40241750 40241832 82 GTGGTGGCACACACATGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCTCTTGAGCCCAGGAGGTCCAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...:......:.........:.::........x:xx.x.:.x.x.....:.....:..x.:::.....:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% -35791450 -58438952 +3493 chr4 + 190214555 40252178 40252177 40252260 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:.........:..:........x.xx.x...xx:........::.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -35781019 -58449383 +3380 chr4 + 190214555 40254444 40254443 40254512 69 CATGGTGGTGGGCGCTTGTAGTCCCAGCCACTTGGGAAGCTGAGGCACGAGAATCGCTTGAATCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::......--.:.x......:.....:.....::.:......x.x:.x...x.:......:....:. 10M2D57M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% -35778753 -58451649 +3651 chr4 + 190214555 40256795 40256794 40256866 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCACTTGAACCCAGGAGGGAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........xxxx.x...x.............:..xxxx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -35776411 -58453991 +3576 chr4 + 190214555 40263451 40263450 40263533 83 CGTGGTGGTGCACGCGTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..........--....:::...........::........x.xx:x...x::...........:.:x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -35769746 -58460656 +3991 chr4 + 190214555 40268589 40268588 40268662 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGTTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.xx.x...x..........:..:..:.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -35764615 -58465787 +3353 chr4 + 190214555 40274181 40274180 40274297 117 ACAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAACTGAATCTATTTCACAGATGGACCTGTACTCCATTAACTTAAGCACAAATATATATTCAA chr4 + 94230402 10583915 10583914 10584025 10583915 10583914 10584025 111 ACAAAGT---ATTTTCTCTCAAAGAAAAATGATCAAAAAAAAAAAGGGGAAAAAGTGCTGAATTTCTCTAAGGGATGAGATTAAATTC--TGAGTCTAGGCA-GAATGTGTATTTGA ...:...---.:.:.x.......:.....x:.xx...........::.:......x:......:.x.:.x.x:....::x:.:x.:..--.x.:::..:...-:...:.:....::. 7M3D78M2D12M1D14M 74/111 66.7% 111/94230402 0.0% 6/111 5.4% 29690266 NA +3581 chr4 + 190214555 40296857 40296856 40296929 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.xx.x...xx:...........:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -35736348 -58494054 +3033 chr4 + 190214555 40311531 40311530 40311591 61 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTAAATCTGGAGGTT chr4 + 94230402 76033206 76033205 76033266 76033206 76033205 76033266 61 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ....x......:.........:.::........x.xx.x...x::...:..:.::..:.:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -35721675 -58508727 +3514 chr4 + 190214555 40316639 40316638 40316720 82 CCTGATCATTTTTTTTCTTTC-------TTTTTTC-------CTCCATCTTTT--------CTTTTCTTTTCTTTCTTTCTTCCTTCCTTTTTCTTTGCTTGCT chr4 + 94230402 77533295 77533294 77533398 77533295 77533294 77533398 104 CCTAATGATTTTTTTTTTTCAGTTAAGATCTTCTCATTGGGATTCTATCTTTTGGTTTATTCTTTTTTTTTTTCCCTTTCTTTGCTCCTTTTTCTTTGCTTGCT ...:..x.........:..:x-------.:..:..-------:..:.......--------.....:....:.::.......:x:................... 21M7I7M7I11M8I43M 66/82 80.5% 104/94230402 0.0% 22/82 26.8% -37216656 -57013746 +3381 chr4 + 190214555 40318955 40318954 40319026 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTTTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.x:........:.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -35714251 -58516151 +3165 chr4 + 190214555 40326605 40326604 40326706 102 AGAAATTCTGTCAAACAAACAAACAAACAAAAAACCAATAACAACAACAACAAAAAA--------AAACAGGATTAGTATTGCCAATATTCTCTCTCTCTTTTTTTTTTT chr4 + 94230402 76741950 76741949 76742055 76741950 76741949 76742055 106 AGAAACCTTTCTTACCAAACAAACAAACAAA----AAATAACAACAACAACAAAAAAAGCCAAACAAACAGAACTGCTGCTTGAATTAGCATAGCTTTATTTGTTTCTTT .....:::.x::x.x................----x.....................--------......:.:.:x.::.xxx.x..x:x.xx..:.x...x...:... 31M4D22M8I45M 70/98 71.4% 106/94230402 0.0% 12/98 12.2% -36415345 -57815057 +3354 chr4 + 190214555 40329228 40329227 40329313 86 TGTACTTGTAGTCCCAGCTATCTGGGAGGCTGAGATGGGAGGATCTCTTGAGCCCAGGAATTGGAGGCCACAGTGCACAATGATAA chr4 + 94230402 76033205 76033204 76033290 76033205 76033204 76033290 86 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAA ..:..x......:.......::..::........x:xx.x.:.x.x.....:.....:.::.xx:...:::..x:..::...x:.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -35703977 -58526425 +3255 chr4 + 190214555 40329537 40329536 40329606 70 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x....:.:...........::........x.xx.x...x::........::.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -35703660 -58526742 +3585 chr4 + 190214555 40338869 40338868 40338919 51 TCTCTCTCTCTCCCTCTCTCTCTCACACACACACACACACAGAGCAAGAAA chr4 + 94230402 75248050 75248049 75248100 75248050 75248049 75248100 51 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagaga .::.........:.........x................x....x:...:. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% -34909181 -59321221 +3933 chr4 + 190214555 40338870 40338869 40338919 50 CTCTCTCTCTCCCTCTCTCTCTCACACACACACACACACAGAGCAAGAAA chr4 + 94230402 75248049 75248048 75248098 75248049 75248048 75248098 50 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagaga ..::.......:...............................x:...:. 50M 44/50 88.0% 50/94230402 0.0% 0/50 0.0% -34909179 -59321223 +3303 chr4 + 190214555 40338872 40338871 40338919 48 CTCTCTCTCCCTCTCTCTCTCACACACACACACACACAGAGCAAGAAA chr4 + 94230402 75248049 75248048 75248096 75248049 75248048 75248096 48 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagaga ..::.....:...........x................x..x:...:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -34909177 -59321225 +3134 chr4 + 190214555 40338872 40338871 40338913 42 CTCTCTCTCCCTCTCTCTCTCACACACACACACACACAGAGC chr4 + 94230402 12601304 12601303 12601345 12601304 12601303 12601345 42 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGC .........:.........x.....:..........x..x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 27737568 NA +3354 chr4 + 190214555 40338874 40338873 40338912 39 CTCTCTCCCTCTCTCTCTCACACACACACACACACAGAG chr4 + 94230402 12601304 12601303 12601342 12601304 12601303 12601342 39 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG .......:.................:..........:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 27737570 NA +3248 chr4 + 190214555 40339150 40339149 40339221 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAACTCACTTAAACCCGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x:.xx.....:.....:.:..x:xx...:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -35694056 -58536346 +3953 chr4 + 190214555 40351192 40351191 40351274 83 CATGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAAGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......::.--....:.:...........::........x.xx.x...x.............:.:x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -35682005 -58548397 +3698 chr4 + 190214555 40358282 40358281 40358364 83 CGTGGTGGTGGGCGCCTGTAATTCCAGCTACTTGGGAGGCTGAGACATGAGAATTGCTTGAACCCAGGGGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.............::........x.x..x...x::...........::.x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35674915 -58555487 +3528 chr4 + 190214555 40368797 40368796 40368866 70 CATGGTGGCAGGCACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x....:.:...........::........x.xx.x...x.:.........:.:.. 9M2D59M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -35664400 -58566002 +3274 chr4 + 190214555 40374744 40374743 40374802 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.:.........x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -35658462 -58571940 +3379 chr4 + 190214555 40382186 40382185 40382253 68 GTGGTGTGCATACTTGTAATACCAGATACTTGGAAGGCTGAGGCAGGAGAACCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGC----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:----..x....:.x....x......:.........x.xx.x...x.............:.. 7M4D57M 52/64 81.2% 64/94230402 0.0% 4/64 6.2% -35651015 -58579387 +3174 chr4 + 190214555 40383095 40383094 40383173 79 GTGGTAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.::.x....:.:...........::........x.x::x...x::........::.:..x.xx:..:..:.. 5M2D72M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -35650106 -58580296 +3037 chr4 + 190214555 40383744 40383743 40383825 82 TCAGATATAAAGCAAATTATTATCAGACCTAAAGAGAGAAATAGGTCCCAATATAATAATAGCTGGAGACTTCAGCACTCCA chr4 + 94230402 85615436 85615435 85615517 85615436 85615435 85615517 82 TTAAATTTGATGCAAATTATTTTCAGGAGTAAAAAGAGACCTTGGTCCCAGTGTAATCTTTGACAAAAGCTACAACACTTTA .:.:..x.:.x..........x....:xx....:.....xx.x.......:.:....xx.x.x:::.::..x..:....::. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -45231692 -48998710 +3236 chr4 + 190214555 40385388 40385387 40385471 84 CAACAGAGTGAGGCTCTGTCTGAAATAAAGAAGGAAAGAAAAAGAAAGGAAGAAAGGGAGGAAGGAAGGAAGAAAGGGAGGGAG chr4 + 94230402 26215989 26215988 26216071 26215989 26215988 26216071 83 CAACAGA-TAAGCTCTTTTTTATAATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG .......-.:..x:::.x.:.:x....:x...:...............x::.:.:....::...:.:.x::.:.:.....:::. 7M1D76M 54/83 65.1% 83/94230402 0.0% 1/83 1.2% 14169399 NA +3202 chr4 + 190214555 40397523 40397522 40397571 49 CTATGCCTGGATTTTTTTTTTTTTTTTTTTTTTTGTACTTTTGGTAGAG chr4 + 94230402 77794379 77794378 77794427 77794379 77794378 77794427 49 CTATGCCCGAGTTTGTCTTTTTTTTTTTTTTTTTTTCCTCTTGGCAGAG .......:.::...x.:.................x.x..:....:.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -37396856 -56833546 +3007 chr4 + 190214555 40398649 40398648 40398693 45 ATTAAGCTTTCTTTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTT chr4 + 94230402 44980305 44980304 44980349 44980305 44980304 44980349 45 ATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTT ...x:..:...:............:x.:............:.... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -4581656 -89648746 +3467 chr4 + 190214555 40399206 40399205 40399283 78 AAGAAGTGCACAAACTAGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCGGAG chr4 + 94230402 76033187 76033186 76033264 76033187 76033186 76033264 78 AAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.xx::...x.x.:.:.::.x....:.:...........::........x.xx.x...x.:.........x.:.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -35633981 -58596421 +3163 chr4 + 190214555 40401164 40401163 40401208 45 ACAAAAAACAAAACAAACAAACAAACAAAAATGCCAGGGATGCAC chr4 + 94230402 79306579 79306578 79306623 79306579 79306578 79306623 45 ACAAAGGGCAAAACAAAGAAACAAACAAAAAAGCCAAGGATGTAC .....:::.........x.............x....:.....:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -38905415 -55324987 +3251 chr4 + 190214555 40409703 40409702 40409788 86 GACAGAGTGAGACCCTGTCTTAAAAAAAAACCAAA-AAACAAAAAACAAACAAAAGGAACAAAAAAATGATAAATTGGACTTCATAA chr4 + 94230402 62811831 62811830 62811915 62811831 62811830 62811915 85 GACAGAGTGG--CTAAGACTTAAAAAGAAAACAAACAAACAAAAAACCAACCCTATAACCAAGAAAAATATAGATTGTTCTTCATAA .........:--.:xx.x........:...x....-...........x...xxx.x:.x...:....xx...:....xx........ 10M2D23M1I51M 64/84 76.2% 85/94230402 0.0% 3/84 3.6% -22402128 -71828274 +3615 chr4 + 190214555 40413843 40413842 40413925 83 CATGGTGGCACGTGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::..--...:.:...........::........x.xx.x...xx............:..x.xx:..:..:.. 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35619354 -58611048 +3442 chr4 + 190214555 40414716 40414715 40414816 101 CATGGTGGCATGCACCTCTAATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGGGAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA------GAACATGATGCCA ..::....--.....x.x..:.x...........::........x.xx.x...xx:...........:..x:xx:..:..:.------...x..x...... 8M2D72M6D13M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% -35618481 -58611921 +3415 chr4 + 190214555 40423644 40423643 40423738 95 TTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT----------------------TCTTTCTTTTCTTTCTTTTCTTTCTTCCTCTT chr4 + 94230402 63697118 63697117 63697234 63697118 63697117 63697234 117 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ..:x...:.:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:----------------------.......:.:.::................:.. 63M22I32M 66/95 69.5% 117/94230402 0.0% 22/95 23.2% -23273474 -70956928 +3156 chr4 + 190214555 40428051 40428050 40428135 85 CATGGCGGTGCGTACTCCTGTAGTTCCAGCTACTCAAGAGGCTGAGGTGCAAGGATCACCTGAGCCTGGGAATTCAAAGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA----CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:.....:----.x................::.:........x:x::x.:.x...:...:..::.:.::.:x::....:.. 12M4D69M 53/81 65.4% 81/94230402 0.0% 4/81 4.9% -35605146 -58625256 +3005 chr4 + 190214555 40431527 40431526 40431587 61 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:.........:.::........x.xx.x...xx:.x......::.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -35601677 -58628725 +3082 chr4 + 190214555 40436168 40436167 40436217 50 TCTCAAAAAAAAAAAAAAACAAACAAACAAACAAACAAAAAAAAACCTTA chr4 + 94230402 70955628 70955627 70955677 70955628 70955627 70955677 50 TCCTAAAAACTAAAAAGAACAAACAAACAAAACAACAAAAAAAAACTGTA ..::.....xx.....:..............xx.............:x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -30519460 -63710942 +3386 chr4 + 190214555 40444059 40444058 40444141 83 CATGGTGGTGTGTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGAAGGATCACCTGAGCTCAGGAAGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:::.--......:.......:...::........x:xx:x.:.x...:...:.:...:.:x..x:.....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -35589138 -58641264 +3172 chr4 + 190214555 40446611 40446610 40446681 71 CACCTGTGGTCCCAGCTATTTGGGAGGCTGAGGTGGGAAGATCACTTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x...:..:.......:...::........x:xx.x::.x.......:..::.:..x.:x:.....:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -35586596 -58643806 +3291 chr4 + 190214555 40450472 40450471 40450544 73 TGCACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.......:...::........x.xx:x...x::........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -35582733 -58647669 +3341 chr4 + 190214555 40452040 40452039 40452111 72 TGTGCCTGTAGTCTCAGCTACTTGGGAGGGTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTAGAGGCTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::.x......::..........::...x....x.xx.x...x::...........:..x.xx:.....:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -35581165 -58649237 +3099 chr4 + 190214555 40456522 40456521 40456586 65 ATACAAAAGTATTAGTCCCATTTTCTTTTTTTTTTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTT chr4 + 94230402 90927814 90927813 90927878 90927814 90927813 90927878 65 ATAGCAAAAAATTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCT ...xx...:x...xx....x:x...................:xx.......:.....:..:.::. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -50471292 -43759110 +3169 chr4 + 190214555 40460539 40460538 40460617 79 GTGGCTCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATTGCTTGAACCAGGAAGGTGAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x....--....:.:...........::........x.xx.xx..x::........x:....x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -35572662 -58657740 +3098 chr4 + 190214555 40461795 40461794 40461877 83 CATGGTGGCAGGCGCCTGTAATCCCAACTACTCGAGAGGCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x....:.:...:.....:..:........x:xx.x...x.:........::.:..x:xx:..:..:.. 9M2D72M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -35571402 -58659000 +3249 chr4 + 190214555 40464752 40464751 40464820 69 ACAGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033198 76033197 76033264 76033198 76033197 76033264 67 ACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......:--....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 8M2D59M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -35568446 -58661956 +3002 chr4 + 190214555 40489998 40489997 40490060 63 TGCAATACACCATATCAACAAAAGACAAAAACTATACACAGTAATCTGAATAGCTGCCAGAAA chr4 + 94230402 40612044 40612043 40612106 40612044 40612043 40612106 63 TGTACTTCACCATATCTTTATAAAACAAATGATATACCCGGTAACCTGAATAGTTTCCAGGAA ..:.x.x.........xx:.x..:.....x:x.....x.:....:........:.x....:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -122046 -94108356 +3476 chr4 + 190214555 40492240 40492239 40492312 73 TGCGCCTGTAGTCCCAGCTACTTCGGAGGCTGAGGTGGGAGAATCACTTGAGCCCCCGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:..........x::........x:xx.x...x.......:...xx:..x..x:.....:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -35540965 -58689437 +3408 chr4 + 190214555 40497847 40497846 40497915 69 GTGGCACATGTCTATGGTTCCAGCTACTTGGAAGGCTGAGGCAGGAGGATCACTTGAGCCTGGGAGCCT chr4 + 94230402 76033201 76033200 76033267 76033201 76033200 76033267 67 GTGGTGCACGTGTA--GTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ....::..:..x..--..............:.........x.xx.x.:.x.......:..::.:...:. 14M2D53M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -35535354 -58695048 +3226 chr4 + 190214555 40505352 40505351 40505418 67 CATGGTGGTATGTGCCTGTGTTCCCAGCTACTTGGGAAGCTGAGGCTGGGGAATCACTTGAACCCAG chr4 + 94230402 76033197 76033196 76033261 76033197 76033196 76033261 65 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ..::.....--.::.x...:x.:...........::.:......x.:x.x...x............. 9M2D56M 49/65 75.4% 65/94230402 0.0% 2/65 3.1% -35527845 -58702557 +3124 chr4 + 190214555 40512592 40512591 40512657 66 GTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAACCCCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.:...........::........x:xx.x...x...........x.:..x:xx:..:..:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -35520620 -58709782 +3768 chr4 + 190214555 40518704 40518703 40518789 86 CAGGGGTGTCCAATCTTTTGGCTTCCCTGGGTCACACTGGAAGAAGAATTGTCTTGGGCCACACATAAAA----TACACTGATACTAATG chr4 + 94230402 65178282 65178281 65178371 65178282 65178281 65178371 90 CATGAGCATCCAACATTTTAGCTTGCTTGGGTTGCACTGAATGAAGAGTTGTTTTGGACTGCATACAAACaggtcactctgaaagtaatg ..x.:.::.....:x....:....x.:.....::.....:.x.....:....:....:.::..:.:...x----:..x....x.x..... 70M4I16M 61/86 70.9% 90/94230402 0.0% 4/86 4.7% -24659578 -69570824 +3772 chr4 + 190214555 40525325 40525324 40525403 79 TAGCACACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCACGAGAATCGCTTGAACCCAGGAG-GCAGGGTTGCAGATCA chr4 + 94230402 76033202 76033201 76033281 76033202 76033201 76033281 80 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA .:.::...x......:...........::.:......x.x:.x...x.:...........:..-x:x...:..:...x.. 63M1I16M 58/79 73.4% 80/94230402 0.0% 1/79 1.3% -35507877 -58722525 +3746 chr4 + 190214555 40528271 40528270 40528351 81 CGTGGTGGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAAACCAGGAGGCCGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::.:.x......:...........::........x.xx.x...x.x......x....:..x::x:..:..:.. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -35504926 -58725476 +3259 chr4 + 190214555 40528625 40528624 40528707 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGCAAAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:...........::....x:..x.xx.x...x::........::.:..x.xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -35504572 -58725830 +3473 chr4 + 190214555 40533298 40533297 40533363 66 GTGGTGCATGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACTCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--......::..........::........x.xx.x..:x.........:.:.:.. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -35499903 -58730499 +3266 chr4 + 190214555 40538613 40538612 40538665 53 TGGCGCCCAGGCTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTGAGACGGAGTC chr4 + 94230402 73574606 73574605 73574658 73574606 73574605 73574658 53 TGGTGTTCGTGCTTTTTTGTTTTTTGTTTGTTTGTTTTTTGTAAAACAGTGTC ...:.::.:x...........................x..x.:.:..:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -33035993 -61194409 +3220 chr4 + 190214555 40552258 40552257 40552340 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCAAGAGGCTGAAGCAGAAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........::.:.......:x.xx:x...x::........::.:..x.xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -35480939 -58749463 +3505 chr4 + 190214555 40558692 40558691 40558770 79 GTGGTGGACACCTGTAGTTCCAGCTAATTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x..............x...::........x.xx.x...x::.......:.:.:..x:xx:..:..... 6M2D71M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -35474509 -58755893 +3005 chr4 + 190214555 40561211 40561210 40561255 45 ACTATTTTTCCATTGTCTTTTTTTTTTTTTTTTTTTTTGAGACGG chr4 + 94230402 63051824 63051823 63051868 63051824 63051823 63051868 45 ACTGTTTTTCTGTTGTCTTTTTTTTTTTTTTTTTCCTGCAGACAG ...:......::......................::.xx....:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -22490613 -71739789 +3276 chr4 + 190214555 40573735 40573734 40573851 117 AAAAAGAAAAGCAA--GAAAGAAAGAGAGAGAGAGAGA---------------AAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA chr4 + 94230402 75241449 75241448 75241582 75241449 75241448 75241582 134 AAAAACAATAGCAATTGGTAGCAAAGGGTAGACAGAGGCTTTTAAATATTATGATGGTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAA .....x..x.....--.:x..x..::.:x...x....:---------------.x.:x...x..:..:x::..:xx.x...x............:..........:...x.:::xx........x..:.x.x.. 14M2I22M15I81M 80/117 68.4% 134/94230402 0.0% 17/117 14.5% -34667714 -59562688 +3164 chr4 + 190214555 40573744 40573743 40573835 92 AGCAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAAA------------------------GAGAGAGAGAGAGAAAGAAAGAAAAAGAAAGAAAG------AAAGAAAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148500 51148379 51148378 51148500 122 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGG ..x.....::.:xx.x...........:.........x.:.------------------------...:.x......:...:..:.....:..::..x..------:...x.x...:...:. 41M24I35M6I16M 68/92 73.9% 122/94230402 0.0% 30/92 32.6% -10574635 -83655767 +3333 chr4 + 190214555 40573748 40573747 40573845 98 AGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ........::..xx.x.......:...:.........x...::xxx...:xx::..x.:..x.--..::.x:...:.:...:..:....::..::..x.. 63M2I35M 64/98 65.3% 100/94230402 0.0% 2/98 2.0% -10574631 -83655771 +3028 chr4 + 190214555 40573762 40573761 40573826 65 AGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA .:..x..:::..xx.x....:.....:.:::::......:...:...:.........:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 11559089 NA +3345 chr4 + 190214555 40573768 40573767 40573854 87 AGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAA chr4 + 94230402 51148379 51148378 51148467 51148379 51148378 51148467 89 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAA ........::.:xx.x.....................x.:..:xxx....--::..x.:..x.x:..::.x..:.....:...:::... 50M2I37M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% -10574611 -83655791 +3466 chr4 + 190214555 40578978 40578977 40579079 102 ACATGGTGGCGTGCACTTGTACTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGGCGGAGGCTACAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033196 76033195 76033289 76033196 76033195 76033289 94 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::....--.....x....x.:.........::::........x.xx:x...x..........::.:..x:xx:....::..------..x..x...... 9M2D73M6D12M 67/94 71.3% 94/94230402 0.0% 8/94 8.5% -35454218 -58776184 +3287 chr4 + 190214555 40582398 40582397 40582476 79 GTGGTGCGTGCCTGTAATCCCAGCTACTTGGGACGCTGAGGCAGGAGAATCGCTTCAACCCAGGAGGTGGAGGGTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--....:.:...........::.x......x.xx.x...x.:...x.......:..x.xx:..x..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -35450803 -58779599 +3772 chr4 + 190214555 40583274 40583273 40583356 83 CATGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTGAACCTGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--....:.:...........::........x.x::x...x..........::::..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35449923 -58780479 +3105 chr4 + 190214555 40583718 40583717 40583787 70 CGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:....:.x:..--......:.........:..:........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -35449479 -58780923 +3169 chr4 + 190214555 40592920 40592919 40592997 78 TGCAAACAATTTGGGACATATATATATATATATATATA-TATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792587 24792586 24792664 24792587 24792586 24792664 78 TGAAAACAGTGTGAGAAAGA-ACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ..x.....:.x..:..x.x.-.:.x.xx..:x...:..-x...................x:........x......... 20M1D17M1I40M 60/77 77.9% 78/94230402 0.0% 2/77 2.6% 15800333 NA +3168 chr4 + 190214555 40592937 40592936 40593006 70 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823265 7823264 7823334 7823265 7823264 7823334 70 ACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT .:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 32769672 NA +3259 chr4 + 190214555 40592940 40592939 40593010 71 TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.xx..:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 32769676 NA +3129 chr4 + 190214555 40592944 40592943 40593011 68 TATATATATATATATATATATATATATATATATATATT---TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x..---x..:...x..:..............x:... 38M3I30M 52/68 76.5% 71/94230402 0.0% 3/68 4.4% 32769680 NA +3410 chr4 + 190214555 40592946 40592945 40593019 74 TATATATATATATATATATATATATATATATATATTTT---TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG chr4 + 94230402 7823264 7823263 7823340 7823264 7823263 7823340 77 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ..:...:.........:.:......x.:.:x.x..:..---x..:...x..:..............x:.....:::. 38M3I36M 55/74 74.3% 77/94230402 0.0% 3/74 4.1% 32769682 NA +3009 chr4 + 190214555 40592948 40592947 40593013 66 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.xx.:..xxxx..:...x..:.............. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 32769684 NA +3145 chr4 + 190214555 40592948 40592947 40593006 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 7341945 NA +3085 chr4 + 190214555 40594046 40594045 40594097 52 CATCTCAAAAAACAAACAAAAAAAAGAAAGAAAGAAAGAAAAGAAAATCATT chr4 + 94230402 31926808 31926807 31926859 31926808 31926807 31926859 52 CACCACAAAAAACAAACAAAAAACAGAAAAAAAGAAACCAAACAACAACATT ..:.x..................x.....:.......xx...x..x.x.... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 8667238 NA +3164 chr4 + 190214555 40595774 40595773 40595834 61 GTGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x.:..:.:...........::........x.xx.x...x::.........:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -35437430 -58792972 +3023 chr4 + 190214555 40599241 40599240 40599289 49 GAACAAGACTCCGTCTCAAAAAAAAAAAAAAAGAAAGAGAAGTCCCTAA chr4 + 94230402 31609415 31609414 31609463 31609415 31609414 31609463 49 GAACAGGCCTCCTTCTGAAAAAAAAAAAGAAAGAAAGTGGACTTCCTAA .....:.x....x...x...........:........x.:.x.:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 8989826 NA +3735 chr4 + 190214555 40602508 40602507 40602590 83 CATGGTGGCGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATGACTTGAACTCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.....--......:...........::........x.xx.x:..xx........:...:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -35430689 -58799713 +3403 chr4 + 190214555 40605703 40605702 40605773 71 CACTTGTAATCCCAGCTACTTGGGAGGCTGAGGAAGGAGAATCACTTGAACCCGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........xxxx.x...x...........:::..x.xx:..:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -35427504 -58802898 +3073 chr4 + 190214555 40611726 40611725 40611770 45 CTCAAAAAAAACAAAAACAAAACAAAACAAAAAAAACCACCCACA chr4 + 94230402 65632404 65632403 65632448 65632404 65632403 65632448 45 CTTAGGAAAAAAAAGAACAAAACAAAACAAAAAAACCCACACACA ..:.::.....x..:....................x....x.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -25020678 -69209724 +3324 chr4 + 190214555 40612375 40612374 40612454 80 AGTGGCACATGCTTGCAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATAGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....::..:.--..:.:.:...........::........x.xx.x...xx:...........:..x:xx:..:..:.. 11M2D67M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% -35420825 -58809577 +3541 chr4 + 190214555 40615312 40615311 40615385 74 GTGCACCTGTGGTCCCAGCTACTTGGGAAGCCGAGGTGAGAGACTCTCTTGAACCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:...........::.:..:...x:xx.x..xx.x...........:..x.:x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -35417892 -58812510 +3170 chr4 + 190214555 40624842 40624841 40624891 50 ATCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTG chr4 + 94230402 82090599 82090598 82090648 82090599 82090598 82090648 50 ATTTTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTG ..:....:::.........:..:.x.....::.:.............:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -41465757 -52764645 +3111 chr4 + 190214555 40638357 40638356 40638420 64 AGAAAGAAAGGAAAGAAAGAAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAGAGAAAAGAAAGA chr4 + 94230402 47460655 47460654 47460718 47460655 47460654 47460718 64 AGAAAAAAACAAAACAAAGAAAAGGGGGGGGTAAGCAGCAAAGAAGAAAGAGACAAAAGCAAGA .....:...x:...x.......:.::..::.x...x.:x:..::.........x.....x.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -6822298 -87408104 +3229 chr4 + 190214555 40646521 40646520 40646603 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -35386676 -58843726 +3107 chr4 + 190214555 40647028 40647027 40647085 58 TATGTGTGTGTATATATATATATATATATATATATATATATATATACACACATATATA chr4 + 94230402 44815600 44815599 44815656 44815600 44815599 44815656 57 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA-ATATA ..........:...:....:x..:.:.:.....x.:.x..:.:.........-..... 52M1D5M 45/57 78.9% 57/94230402 0.0% 1/57 1.8% -4168572 -90061830 +3240 chr4 + 190214555 40647039 40647038 40647169 131 ATATATATATATATATATATATATATATATATATACACACATATATATGTGTGTATATATACACATACATATGTATGTGTA--TATATACACATATATATGTATGTGTGTATATACACATATATATGTATATA chr4 + 94230402 63788529 63788528 63788656 63788529 63788528 63788656 128 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATA-AAGTGC-TTTGTAATTGGAATTCTGTAAAACTGTGCATTTA---GTGTATGTGGGCAAATATATGAAAATA .......:x..x.xx..xx:...:.......:...x...x.....:x..............-.x:.:.-.x....xx..x.--.x.:..x.xx.:.::..x..---......:.:x:..x.......x.x... 61M1D6M1D12M2I20M3D27M 89/126 70.6% 128/94230402 0.0% 7/126 5.6% -23141490 -71088912 +3115 chr4 + 190214555 40647077 40647076 40647138 62 ACATATATATGTGTGTATATATACACATACATATGTATGTGTATATATACACATATATATGT chr4 + 94230402 76709593 76709592 76709654 76709593 76709592 76709654 62 ATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT .:......:::.....x....:.x:...x..:............x.:.::x:......x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -36062516 -58167886 +3833 chr4 + 190214555 40663905 40663904 40663986 82 ATAATAGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGATTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:.:.....:.--....:.:...........::........x.xx.x...x.............:..x.xx:.::..:.. 13M2D67M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% -35369293 -58861109 +3074 chr4 + 190214555 40669845 40669844 40669930 86 ATACAGCCAGACATGTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGGATTGCTGGAGCCCAGGAAATCGAGACTGCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACA--CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--...xx:..::.x......:.......:...::........x.xx.x.:.x::..x..:.....:.:x.:x:.:...:.. 5M2D79M 56/84 66.7% 84/94230402 0.0% 2/84 2.4% -35363349 -58867053 +3351 chr4 + 190214555 40672235 40672234 40672317 83 CATGGTGGCACGTACCTGTAGTCCCAGCAACTTGGGAGGCTGAGACGCGAGAATCGCTCGAACCTGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.--..x......:.....x.....::........x.x:.x...x.:..:.....::.:..x.xx:..:..:.. 11M2D70M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -35360962 -58869440 +3506 chr4 + 190214555 40697255 40697254 40697347 93 AATTTAAAAAGGCATATATATACACATACATACATACATACGTAGGTATACATACATATATGCATGTATGTATACATATACATGCATATATGT chr4 + 94230402 22600187 22600186 22600271 22600187 22600186 22600271 85 AATTCAGGAAGACACACATATTCACATGCAAACACAT--------GCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT ....:.::...:..:.:....x.....:..x...:.:--------.:.....x.x....:.::..x.:...:.::....:......::..x.. 37M8D48M 59/85 69.4% 85/94230402 0.0% 8/85 9.4% 18097068 NA +3323 chr4 + 190214555 40697270 40697269 40697321 52 ATATATACACATACATACATACATACGTAGGTATACATACATATATGCATGT chr4 + 94230402 42936216 42936215 42936267 42936216 42936215 42936267 52 ATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATAT ..:....:......x..........:.:....:.:..:...x...:....:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -2238946 -91991456 +3023 chr4 + 190214555 40697387 40697386 40697425 39 ATTATACATATATATATATATATATACACACACACACAT chr4 + 94230402 41650591 41650590 41650629 41650591 41650590 41650629 39 ATTAAACATATATATATATATATACACACACACACGTAT ....x...................:..........::.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -953204 -93277198 +3028 chr4 + 190214555 40700924 40700923 40700968 45 TCTCAAAAAAAAAAAAAAAAACAAAAAAAAAAACCAGAAATTAAA chr4 + 94230402 79620282 79620281 79620326 79620282 79620281 79620326 45 TCTCAAAAAAAAAAAAAAAGGCAAAAAAATAAACCCAAACTCAAA ...................::........x.....x:..x.:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -38919358 -55311044 +3594 chr4 + 190214555 40703319 40703318 40703387 69 CGTGGTGGTACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAACCTGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .:::.....:....--......:...........::........x.x:.x...x.:........::.:. 14M2D53M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -35329878 -58900524 +3297 chr4 + 190214555 40715535 40715534 40715579 45 AATTTAATTTTGGTTTGTTTGTTTGTTTGTTTTTTGAGACAGAGC chr4 + 94230402 22359248 22359247 22359292 22359248 22359247 22359292 45 AATATGATTTTACTTTTTTTGTTTGTTTGTTTTTTGAGACAGAGC ...x.:.....:x...x............................ 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 18356287 NA +3595 chr4 + 190214555 40725675 40725674 40725757 83 CATAGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.......x::.--....:.:...........::........x.xx.x...x...........:.:.:x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35307522 -58922880 +3200 chr4 + 190214555 40740491 40740490 40740578 88 ATGTCTAACATACATATCTACGTATATATGTT-----GATATATGAATGTGTATATATACACACACACACACACAGTTTATCAGTCTGTGTGC chr4 + 94230402 75569426 75569425 75569518 75569426 75569425 75569518 93 ATGTCCCACAGGAAAATCTGTGACTGTGTGATTCAAGGTCATATGATAATACATATATACACACACACTCACACAGCCAATTGGTCTGTCTGC .....:x...x:x.x....::.xx.:.:..x.-----.x:......xx:.::................x.......::x..::......x... 32M5I56M 61/88 69.3% 93/94230402 0.0% 5/88 5.7% -34828935 -59401467 +3484 chr4 + 190214555 40740567 40740566 40740700 134 CAGTCTGTGTGCTTGTACATATATATATGTATATACAGACATTATGAATAGATAGAAAGATAGATCCATTATCTATCCATCT-------ATCTGTGTGTGTATATGTGTATGTATATGTATATATATACACATACACACAT chr4 + 94230402 68837021 68837020 68837144 68837021 68837020 68837144 124 CAGTTCATGTGtatatacatacatacatacctacacacacac---GCAAGGCCAGGAAATTAAGT--------------TCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT ....:::....:x.:......:...:..::x..:...x...:---.x.x:.x:..:..:x..::.--------------...-------.:x....:....:.:......:::.:.x:..:...:........:....... 42M3D20M14D3M7I52M 79/117 67.5% 124/94230402 0.0% 24/117 20.5% -28096454 -66133948 +3346 chr4 + 190214555 40741622 40741621 40741704 83 CGTAGTGGTGGGCTCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTGGAACCAGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......--.x.x....:.............::........x.xx.x...x....x.....x:.:.:x.xx:..:..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35291575 -58938827 +3601 chr4 + 190214555 40757604 40757603 40757756 153 ATATACATTGTGTGTATATATATATACATT-----------GTGTGTATATATATACATTGTGTATATATATACATTGTGTGTATATATATACACAC-TGTGTATATATATAC-----------------------------ATTGTGTGTGTGTGTATATATACACACACACACACACACACACACATACATA chr4 + 94230402 68836951 68836950 68837143 68836951 68836950 68837143 193 atatatatttttttCACAGTTATGTGCCTTTCTGATCAGAAGTTTGCAAGTATTT-TGCTGTGGATAGTTACAGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:...x.x.x:.:.xx...:.:.x..-----------..x..:.x:...x.-:::....x...xx..:.xx.::..........:.....:..-.::x..:.:.:.:..-----------------------------.x:.....:......:.:.:........x.:...:...:.....:::...:. 30M11I14M1D41M1I15M29I52M 102/152 67.1% 193/94230402 0.0% 42/152 27.6% -28079347 -66151055 +3171 chr4 + 190214555 40757659 40757658 40757725 67 ATATATACATTGTGTGTATATATATACACACTGTGTATATATATACATTGTGTGTGTGTGTATATAT chr4 + 94230402 93711954 93711953 93712016 93711954 93711953 93712016 63 ATACATCCATTATATATATATGCTTACACCATGTGTATATAT----AATGTGTGTGTGTGTGTGTGT ...:..x....:.:.:.....::x.....xx...........----.x.............:.:.:. 42M4D21M 49/63 77.8% 63/94230402 0.0% 4/63 6.3% -52954295 -41276107 +3287 chr4 + 190214555 40757695 40757694 40757767 73 ATATATATACATTGTGTGTGTGTGTATATATACACACACACACACACACACACACATACATACACAAAAGTAA chr4 + 94230402 74671060 74671059 74671132 74671060 74671059 74671132 73 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAA .....:.x.x...:xx...:.:.:........:...............x.x.x.x...xx..x.x....x... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -33913365 -60317037 +3200 chr4 + 190214555 40757700 40757699 40757767 68 TATACATTGTGTGTGTGTGTATATATACACACACACACACACACACACACATACATACACAAAAGTAA chr4 + 94230402 6083165 6083164 6083232 6083165 6083164 6083232 68 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAA ....:..x............::::.......x...:.:.:.:.:.:.:x.x.....::.x....:x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 34674535 NA +3031 chr4 + 190214555 40757707 40757706 40757747 41 TGTGTGTGTGTGTATATATACACACACACACACACACACAC chr4 + 94230402 36111768 36111767 36111808 36111768 36111767 36111808 41 TGTGCCTGTGCGTATATATACACACACATACACACGTACAC ....:x....:.................:......::.... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 4645939 NA +4024 chr4 + 190214555 40770920 40770919 40771031 112 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGCGGAGGTTGCAG----------TAAGCCGAGAT-TGCACCA---CTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......x......:...........::........x.xx.x...x.x...........:..x:xx:..:..:..----------:....x..x:.-...x.:.---....x.-.....x....... 74M10I11M1I7M3I6M1D13M 85/111 76.6% 125/94230402 0.0% 15/111 13.5% -35262284 -58968118 +3860 chr4 + 190214555 40780731 40780730 40780838 108 AAAATATTATGTAAACATTGAAATACAC--------ACACACACACACACACACACACACACACATACACATATATATATATATATATATATT-----------TTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 74526046 74526045 74526168 74526046 74526045 74526168 123 AAAATATTGT----AGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGTTTCTGTtttgcttgtttctttg ........:.----.x.......x....--------.............::x...:.....x.:...:..:.......:...x..x..xxx..-----------...:.x....x:..x...:.... 10M4D14M8I57M11I23M 81/104 77.9% 123/94230402 0.0% 23/104 22.1% -33745315 -60485087 +3017 chr4 + 190214555 40780793 40780792 40780831 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 15988167 NA +3530 chr4 + 190214555 40782729 40782728 40782811 83 CATGGTGGCACATGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTAGAAGGATCACTTTAGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......:.:.........::........x:xx:x.:.x.....x.:.....:..:.:x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -35250468 -58979934 +3729 chr4 + 190214555 40783709 40783708 40783790 82 ATGGTGGTGCACACTGGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGGACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.........::--...:.:.........::::........x.xx.x...x......:.........x.xx:..:..:.. 14M2D66M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% -35249489 -58980913 +3213 chr4 + 190214555 40785314 40785313 40785391 78 GAAATCAGGGAAAAAAAGAAAAAGAAAAGTAGGAAATCCCATGACATTTTGGATTTTTTTTTTGAGATGGAGTTTCAC chr4 + 94230402 56833759 56833758 56833836 56833759 56833758 56833836 78 GATATAAAAAAGAAAAAAAAAACGAATAGTATAAAATTTCAATGCATTTTGGACTTTTTCTTCCAATTAAAACTTCAC ..x..x.:::.:.....:....x...x....x:....::..xx:.........:.....:..:x.:x.::.::..... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -16048445 -78181957 +3121 chr4 + 190214555 40804311 40804310 40804370 60 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTAGGAGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..:.x....:.:...........::........x.xx.x...x.:.......:x:..:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -35228895 -59001507 +4093 chr4 + 190214555 40836346 40836345 40836419 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGTGAGAATCACTTGAACTCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x:x..x...x.........:...:..x.xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -35196858 -59033544 +3613 chr4 + 190214555 40847322 40847321 40847404 83 CATGGTGGCGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACGTGAGAATCACTGCAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:....:--......:.........::::........x.x..x...x....xx.....:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -35185875 -59044527 +3833 chr4 + 190214555 40851682 40851681 40851843 162 TGAAAATACTGACTGCAGAAGGAATATTTTCTATGCA-TATATATATATATATATATATTTTTTTTTTTTTTTTTTTTCAAAACCAAACCAAAGTT-------------ATCTCAAAACTCAAGTTCTCTGACAAACATGTTGT---TAAGCTTTCAAGTTCACAATTCTGCAGCTGGA chr4 + 94230402 24792587 24792586 24792763 24792587 24792586 24792763 177 TGAAAACAGTGTGAGAAAGAACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTC-AATCTCAA-TCCCCTGGAATGCATGATATTCCTAAAACACAGAGTTTACTATATTACATCTGGA ......:.x..xxx.x.::.:x.:x...x::....:.-x...................xx........x..............:::x.::::.x..-------------.....-..x.....-.:.:...:x.x:....x.:.---...:x:x:x:....:..x..x:.:..x..... 37M1I58M13I5M1D8M1D20M3I32M 109/160 68.1% 177/94230402 0.0% 19/160 11.9% 16059095 NA +3017 chr4 + 190214555 40851718 40851717 40851756 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 16059092 NA +3144 chr4 + 190214555 40854789 40854788 40854830 42 CCAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAAAGAAATTCA chr4 + 94230402 75300454 75300453 75300495 75300454 75300453 75300495 42 CCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCA ....................:::...:...:.:......... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -34445665 -59784737 +3524 chr4 + 190214555 40855605 40855604 40855678 74 GTGCACTTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:.........::::........x.xx.x...x..........::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -35177599 -59052803 +3051 chr4 + 190214555 40862730 40862729 40862797 68 GCACCTACAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGTGCGGCAGAAGTT chr4 + 94230402 76033206 76033205 76033266 76033206 76033205 76033266 61 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC-------CAGAAGCT ....x.::.:.:...........::........x.xx.x...x..........-------......:. 53M7D8M 48/61 78.7% 61/94230402 0.0% 7/61 11.5% -35170476 -59059926 +3025 chr4 + 190214555 40864254 40864253 40864303 50 ATAAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAACCACTGTGTA chr4 + 94230402 44454747 44454746 44454796 44454747 44454746 44454796 50 ATTAAAGCAAAACAAACAAAAACAAAAGCAAACAAAAAAACCACTCAGTA ..x...:.........xx.........xx................xx... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -3590493 -90639909 +3829 chr4 + 190214555 40883447 40883446 40883529 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -35149750 -59080652 +3106 chr4 + 190214555 40886351 40886350 40886422 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAACCGCTTGAAACCGGGGGGCAAAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx:x...x.:......x..:.::.x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -35146855 -59083547 +4629 chr4 + 190214555 40902897 40902896 40903085 189 TTGGGAGGCTGACGC-AGGAGGATCACTTGAGGCCGAGAGTTCAAGACAAGCCTGGGTAACAAAGTGAGACATGGTCTGTAAAAAAA---ATTTTTTTTAATTAGCCAGACACAGTGGTGCACACCTGTAGTCCCAGCTACTAGAGAGGCTGAGGTGGGAGGATCACTTGAGCTCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033094 76033093 76033277 76033094 76033093 76033277 184 TTGGGAACCTGATTTGAGGAAGTAGACTGAAAGAGGAGGGCAGAAGGCA-------GTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:x....:x:-....:.xxx...x:.:.xx...:.:xx...:..-------....x:.xxx.:...x....:..x:...:x.---.x.x.:x.x..xx:::x.x..............:--......:.........x..:........x:xx.x.:.x.......:.:...:..:..x:.....:.. 15M1I33M7D31M3I34M2D67M 119/180 66.1% 184/94230402 0.0% 13/180 7.2% -35130197 -59100205 +3055 chr4 + 190214555 40907333 40907332 40907381 49 TAATTTAATATATTACATATATATATATATATATATATATATATATATT chr4 + 94230402 35359692 35359691 35359740 35359692 35359691 35359740 49 TAATTTGATATTTTATATATAAACATATGTACACATATATACATACATT ......:....x...:.....x.:....:..:.:.......:...:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 5547641 NA +3509 chr4 + 190214555 40950713 40950712 40950785 73 TGCCCCTGTAGTCCCAGCTACTCAAGATGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:.........::.:.x......x.xx.x...x.............:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -35082492 -59147910 +3261 chr4 + 190214555 40953158 40953157 40953238 81 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTAGAAGGCTGAGGTAGGGGAATCACCTGAACCTGGGAG--GTAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:..........::.........x:xx.x...x...:......::.:..--x.:..:..:.. 10M2D58M2I11M 57/79 72.2% 81/94230402 0.0% 4/79 5.1% -35080039 -59150363 +3303 chr4 + 190214555 40961638 40961637 40961726 89 GTATAATAATGAAAGAAAAAAAAAAGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACCAGTTTCCTGATTCTCATCTG chr4 + 94230402 59199845 59199844 59199931 59199845 59199844 59199931 87 GTATAATCA--AAACAATGCATAAAGAGATACAAAAAAGAAAAGAGAAAAAAAAAGTGGAAAAAAAGCCAGCCCAATAATTCTGAACTG .......x.--...x..x:x.x.....x:..x......:....:.:.........:x::....:..:....:::xx.:.....x.x... 9M2D78M 61/87 70.1% 87/94230402 0.0% 2/87 2.3% -18238207 -75992195 +3299 chr4 + 190214555 40964981 40964980 40965075 95 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAAAATTGCTTGAACTCGGGAGGTGGAGGTTGCAGTGAGATGATATCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCA ......-......----....:...........::........x.xx.x:..x::.......:.:.:..x.xx:..:..:..-:.x.....::.. 6M1D6M4D65M1D12M 65/89 73.0% 89/94230402 0.0% 6/89 6.7% -35068220 -59162182 +3117 chr4 + 190214555 40973812 40973811 40973882 71 CATTCTCTTTCTTCTGTGTGTGTGTCTGTCTCCAAATTTCCTTTTTTTTTTTTTTTTCCAGACAGAGTCTC chr4 + 94230402 43412346 43412345 43412416 43412346 43412345 43412416 71 CATTCTGTTTCTACTGTTTCTTTTTCTGCATTTATATTCCTTTTTTTTTTTTTTTCCTCACATGTAATCTC ......x.....x....x.x.x.x....:x.::.x...:.:..............:::..x.::x.:.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -2438534 -91791868 +3508 chr4 + 190214555 40982045 40982044 40982127 83 CGTGGTAGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGTAAAAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:.::..:.--....:.:...........::........x.x.:x:..x.:...........:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -35051152 -59179250 +3042 chr4 + 190214555 40982229 40982228 40982309 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAA chr4 + 94230402 41112178 41112177 41112258 41112178 41112177 41112258 81 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x...........:.x:x.::...x:.....:.:x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -129949 -94100453 +3758 chr4 + 190214555 40982233 40982232 40982381 149 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG---GAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044808 49044660 49044659 49044808 149 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGT---GAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x:.....---x...x:..:....:.:..:xx..........::..:.x---....:.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 53M3I38M3D55M 89/146 61.0% 149/94230402 0.0% 6/146 4.1% -8062427 -86167975 +3591 chr4 + 190214555 40982237 40982236 40982385 149 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAAGAAA-GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044808 49044660 49044659 49044808 149 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACT-AAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x::....x.xx-...x:..:....:....:xx..........:.:.::-...::.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 57M1D36M1I55M 88/148 59.5% 149/94230402 0.0% 2/148 1.4% -8062423 -86167979 +3579 chr4 + 190214555 40982237 40982236 40982367 131 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAGG-------AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::.:xx.x...:...:...:.........x.:.::xxx.:::xx.:..x.:.:x.x...:..x:...:.:...:..:......:.:.:.x:-------:.:.x.x.........:..x:x.xx:..:... 99M7I32M 80/131 61.1% 138/94230402 0.0% 7/131 5.3% -10166142 -84064260 +3277 chr4 + 190214555 40982276 40982275 40982373 98 AAGAAAGAAGGAAGGAAGGAAGGAAGGA-AGGAAAGAAAGAAAGAAAGAAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 58935729 58935728 58935825 58935729 58935728 58935825 97 AAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAG--AGGAAATTGTGCAGGAA ......:x..x:.xx......::.x.:.-.....:....:x.......x....:......:..x:.x.x....:.::...--.....:xx:x.x..... 28M1I51M2D17M 67/96 69.8% 97/94230402 0.0% 3/96 3.1% -17953453 -76276949 +3004 chr4 + 190214555 40982292 40982291 40982379 88 AGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 78784184 78784183 78784271 78784184 78784183 78784271 88 AAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGGTGG .::.:...xx..:......x...:x.:.:......:.x.:..x...:...::....x.:x.xx.:...:.:....:::x:..:.:x.. 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% -37801892 -56428510 +4163 chr4 + 190214555 40982311 40982310 40982455 145 AAAGAAAGAAAGAAAAGAAAGAAGGA------AGGAAGGAAGGAAGGAAGGA----------AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 49044660 49044659 49044820 49044660 49044659 49044820 161 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .....:.:..::.x....:.xx...:------..:...:x.:.x..x:..:.----------..:....:.:..:xx..:...:....:....x:::...x.....:..........x...:x.:.:..xx:.::xx..:....::....:x:..x..x.. 26M6I20M10I99M 93/145 64.1% 161/94230402 0.0% 16/145 11.0% -8062349 -86168053 +3095 chr4 + 190214555 40982313 40982312 40982443 131 AGAAAGAAAGAAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 28321586 28321585 28321716 28321586 28321585 28321716 131 AGAAATGTACATAAGGCATGAGAACTGAAGATAGGTAAAGAGGGAAGAAGTTAGAAAAGATTGAAGGATGAAATAAAAATATATCCAGACTAGAATGAGACAGAAGAAATAGGAAAGAAAGCCAAAGAGAA .....x:x.x.x...:x.x:..:.xx....:x...x.:::...:.:....xx..:..:..xx......x.:..x:..::x.x:xxx..:xx....x..:.x.:.::..:x.:.........xx.:.:.... 131M 77/131 58.8% 131/94230402 0.0% 0/131 0.0% 12660727 NA +3009 chr4 + 190214555 40982390 40982389 40982444 55 GGAAAGGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 24202362 24202361 24202416 24202362 24202361 24202416 55 GGAAAGGAAAGGGAAGAAGGGAAGAACACCAACACCAAAGAAAAAAAGAAAAAAA ............:.....:.:.....x:xx.:x.xx.......:.......:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 16780028 NA +3169 chr4 + 190214555 40991149 40991148 40991208 60 ATTTTGTTGTGTGTGTGTGTGTTTT-----GCTTTTTTTTTTTTTTTTTTTTTTGTAGAAATGAG chr4 + 94230402 49063098 49063097 49063159 49063098 49063097 49063159 62 ATTGTGTTATGC---TATGTACTTTATAGTGCCTTTTTTTTTTTTTTTTTTTCTGTAGAAATGAG ...x....:..:---.:...::...-----..:...................:............ 12M3D10M5I35M 49/57 86.0% 62/94230402 0.0% 8/57 14.0% -8071949 -86158453 +3079 chr4 + 190214555 40993353 40993352 40993401 49 TCTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTAACAAAAATGTTTTTT chr4 + 94230402 56907978 56907977 56908026 56907978 56907977 56908026 49 TCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTT ..........:.:..............:.....::...::::x...:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -15914625 -78315777 +3428 chr4 + 190214555 40994810 40994809 40994915 106 GGAAAAAAAAAAAAAGAAAAGAAAAGAAGAAAGGAAAAAGGAAGGAAGGAGAGAGAGAAG---------------------------------GAGGGAG-------GGAGGGAAGGAGGGAAAGAAATAAAGAAGGAAAATATTA chr4 + 94230402 84536577 84536576 84536722 84536577 84536576 84536722 146 GGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTA .....:.......x.:x...:.x.:....x:.:......:.::::.:......::.....---------------------------------...::..-------.:.....xx.:.:.:....:..x.......x...x.... 60M33I7M7I39M 76/106 71.7% 146/94230402 0.0% 40/106 37.7% -43541767 -50688635 +3461 chr4 + 190214555 40994849 40994848 40994904 56 GGAAGGAAGGAGAGAGAGAAGGAGGGAGGGAGGGAAGGAGGGAAAGAAATAAAGAA chr4 + 94230402 32265570 32265569 32265624 32265570 32265569 32265624 55 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAAT-AATAGAGAA .........:.:......:..::.:............:...:...x-....:.... 46M1D9M 45/55 81.8% 55/94230402 0.0% 1/55 1.8% 8729279 NA +3617 chr4 + 190214555 41000016 41000015 41000093 78 AAAAAAAAAACAAACGTGTGTGTGTGTGTATGTATATGTATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 86633914 86633913 86633991 86633914 86633913 86633991 78 AGACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:.x...:..::.:....:...:..:x....:.:.x......:..::........:.:::.x...:..::.x...:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -45633898 -48596504 +3602 chr4 + 190214555 41000017 41000016 41000097 81 AAAAAAAAACAAACGTGTGTGTGTGTGTATGTATATGTATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 86633911 86633910 86633991 86633911 86633910 86633991 81 AAAAGACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ....:.x..x:..:.x.:...:...:...x........x.:....::..:..:...:.:.:::.x...:..::.x...:.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -45633894 -48596508 +3148 chr4 + 190214555 41081257 41081256 41081311 55 AGTGTGTGTGTGTCTGTGTGTGTGTATGTGTGTACGTGTGTACACATGTGTGAAA chr4 + 94230402 320572 320571 320626 320572 320571 320626 55 AATGGGGGTGTGTCTGTGTATGTATACGTGTGTTCATATGTGTACAAGTGTGCAA .:..x.x............:...:..:......x.:.:...::...x.....x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 40760685 NA +3641 chr4 + 190214555 41083548 41083547 41083630 83 CACGGTAGCCCGCACCTATAGTCGCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..:.:--....x.:....:x........::::........x.xx.x...x.:..............x.xx:.....:.. 9M2D72M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -34949649 -59280753 +3182 chr4 + 190214555 41101829 41101828 41101919 91 TGCGCCTGTAATCCCAGCTACTCAGAAGCCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAAGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:.x....:.:.........:::...x.....x.xx.x...x.:.........:.:..x:xx::.:..:..------..x..x...... 73M6D12M 59/85 69.4% 85/94230402 0.0% 6/85 7.1% -34931376 -59299026 +3149 chr4 + 190214555 41112857 41112856 41112929 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAACTGCTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.xx:x...x::......:....:..x:xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -34920348 -59310054 +3707 chr4 + 190214555 41131900 41131899 41131982 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:.........::::........x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -34901297 -59329105 +3461 chr4 + 190214555 41141318 41141317 41141419 102 GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGCACACGCGCATGTGTGCGTGTGCATGTGTGCATATGCATACGAGTGTCCCTTCCCTT chr4 + 94230402 79265519 79265518 79265617 79265519 79265518 79265617 99 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---ACACCTCTATATAAATGCACTTTGCCTT .............:x........xx...:.x.:::.::x:............:x.::.:.x:....x..::---:..:x.x:...::.:..:x.:..x.... 71M3D28M 64/99 64.6% 99/94230402 0.0% 3/99 3.0% -38124201 -56106201 +3015 chr4 + 190214555 41141333 41141332 41141401 69 TGTGTGTGTGTGTGTCTGTGTGTCTGTGTGCACACGCGCATGTGTGCGTGTGCATGTGTGCATATGCAT chr4 + 94230402 25672311 25672310 25672379 25672311 25672310 25672379 69 TGTGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT .....:....x....xx:.x.:::x:.:......::::..:.::.::.::...x............... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 15469022 NA +3063 chr4 + 190214555 41159875 41159874 41159938 64 AGGGCAAAAAAAAAAAAAGGAAGAAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA chr4 + 94230402 66803524 66803523 66803587 66803524 66803523 66803587 64 AAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGA .::...:.:...:.....::.........:.:.......:.x..x...x:::.:::..:x.... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -25643649 -68586753 +3058 chr4 + 190214555 41196030 41196029 41196088 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -34837176 -59393226 +3452 chr4 + 190214555 41207058 41207057 41207141 84 ATACAGTGGCGGGCACCTGTAGTTCCAACTACTTGGGTAGCTGAGGCAGGAAAACTGCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.......:.--...x..........:.......::x:......x.xx.x:..x::........::....x.xx:..:..:.. 11M2D71M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -34826138 -59404264 +3181 chr4 + 190214555 41215410 41215409 41215472 63 GCCCAAGCATCTGTATATCTAACAAGTTCCCATGGGATGCTGATGCTGCTGGTGTGAGGACTA chr4 + 94230402 46811258 46811257 46811320 46811258 46811257 46811320 63 GCCCAAGTATCTCTATGTTCAAATATTTCCCATGGGCTGCTGATAATATCAATGTGAGAATTA .......:....x...:.::..xx.x..........x.......:x.:::::......:.:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -5595848 -88634554 +3366 chr4 + 190214555 41242232 41242231 41242381 150 AGCAGGAGAACTGAAGGTGCACAGGCTTCGAAATCCAGTGAAGCTGGGTTCAGACCCTGACTTGAACACTTAGTAGCTGTGTGACTT--AGCAAGTTAAATGGTCTCTTTGAGGCCTCAGTTTTCCTATCTGTAAAACTAAGGTAGAAATAC chr4 + 94230402 13242398 13242397 13242545 13242398 13242397 13242545 148 AGCATGCACAGTGACAGAGCACAGGACAAGACAGCAAG---ACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACC-TGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTAC ....x.x:x.x...x:.x.......x:xx..x.x.x..---.x:..:.x..x.x:..:::..:x:x....x.x.x:.:-......:.--:......:.x:.:.:....:.:.x..........:..:..........:x::.:..xx.x... 38M3D37M1D8M2I63M 92/146 63.0% 148/94230402 0.0% 6/146 4.1% 27999834 NA +3313 chr4 + 190214555 41249162 41249161 41249233 72 GTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAAGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........::.:........x.xx.x...x..........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -34784044 -59446358 +3709 chr4 + 190214555 41292827 41292826 41292972 146 TCTAAGAAAGAAAGAGAGAGAGAAAGAGAAAG-AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGA--AAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGA chr4 + 94230402 89498604 89498603 89498752 89498604 89498603 89498752 149 TCTAGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGATTAATTAGAGTCTTACAGAGGAGAACAAAGAGCAAGGA ....:....::..:x.::..:...x:.:..x.-.::..:.xx..::.:..x..:..:x...x.::..::..:x::.x...x........:.:....x.:.x.:..:.....--..xx...:xxxx.x.....:::.x..:...x:.... 32M1I78M2I36M 89/146 61.0% 149/94230402 0.0% 3/146 2.1% -48205777 -46024625 +3543 chr4 + 190214555 41292838 41292837 41292942 105 AAGAG-AGAGAGAAAGAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAG chr4 + 94230402 15855375 15855374 15855480 15855375 15855374 15855480 106 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG .....-.:.....:...::x:..x........xxx::.x..:xx...::.:.:.xxx...:...:...:.::..::.:......:.x..:......x::.....:. 5M1I100M 67/105 63.8% 106/94230402 0.0% 1/105 1.0% 25437463 NA +3502 chr4 + 190214555 41292856 41292855 41292989 134 AAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGAAAGAAAAGAAAAGAAAC chr4 + 94230402 54011593 54011592 54011724 54011593 54011592 54011724 132 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCA--AGAGACGAAGGAAAAAAAAAAAAAC .::....:...x........x......:..:....:x.xxxx::..x:x..x......:.:x:.:..x:xx....xxx.:....:xxx.x..x.x:...::.:..x.--..:..x...:.....:....:.... 107M2D25M 83/132 62.9% 132/94230402 0.0% 2/132 1.5% -12718737 -81511665 +3061 chr4 + 190214555 41292860 41292859 41292988 129 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGAAAGAAAAGAAAAGAAA chr4 + 94230402 54011593 54011592 54011721 54011593 54011592 54011721 129 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAA .:.:...:...x........x......:..:....:x.xxxx::..x:x..x......::.x:..:.x:xx...:xxx..:.:..xxx.x.:x.x.....:..:.x::...:x:.:::..:....:... 129M 75/129 58.1% 129/94230402 0.0% 0/129 0.0% -12718733 -81511669 +3126 chr4 + 190214555 41292862 41292861 41292943 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:.:x.x...:..x...:..::.x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 180684 NA +3110 chr4 + 190214555 41292866 41292865 41292940 75 AGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...-......x:..x...x:.....:.:x:.:x.x...x.x:............::...:. 18M1I57M 53/75 70.7% 76/94230402 0.0% 1/75 1.3% -30308160 -63922242 +3061 chr4 + 190214555 41292922 41292921 41292974 53 AAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGAAA chr4 + 94230402 59601150 59601149 59601202 59601150 59601149 59601202 53 AAAGAAAAGTAAATCAGGGAGAAATGACAAGAGAGAGAGAGGAAGGGAAGAGA .........x...xx.::......x..x.....:......:.:.....:..:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -18308228 -75922174 +3043 chr4 + 190214555 41292929 41292928 41292991 63 AGAAAAGAAAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGAAAGAAAAGAAAAGAAACCA chr4 + 94230402 18597479 18597478 18597541 18597479 18597478 18597541 63 AGAAAGTAAAAGAGAAAAGGGAAGGAGTGGAAAAGGGGGGGGAAAGAAAGAGTACTGAAAACA .....:x............::...::.x:..:....:...:.:..::..:..x.xx....x.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 22695450 NA +3128 chr4 + 190214555 41306048 41306047 41306095 48 CTGGAATTTCTTTTTTCTTTTTCCTTTTTTTTTTCTTTCAGAGTCTGT chr4 + 94230402 19098535 19098534 19098582 19098535 19098534 19098582 48 CTGAAATATCTTTTCTTTTTTTCTTTTTTTTTTCCTTTCAGGGCTTAT ...:...x......:.:......:.........:.......:.::.:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 22207513 NA +3100 chr4 + 190214555 41308866 41308865 41308948 83 CATGGTGGCACACACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATTGCTTGACTCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--....:.:...........::.:......x.xx.x...x::.....x:....:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -34724331 -59506071 +3706 chr4 + 190214555 41357246 41357245 41357317 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x..........:..:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -34675960 -59554442 +3082 chr4 + 190214555 41367677 41367676 41367746 70 AAAAATCCAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAATCATCCGG-----GCGTGGTGGCAGGCACCTGTA chr4 + 94230402 77634781 77634780 77634855 77634781 77634780 77634855 75 AAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAAGTCATACAGAAATCACCTTGTGGCTTAGACTTGTA ......x...............:....x...x...x....:....x.:.-----:.x.x.....xx:x..:.... 49M5I21M 54/70 77.1% 75/94230402 0.0% 5/70 7.1% -36267104 -57963298 +3195 chr4 + 190214555 41380464 41380463 41380523 60 TTTTCTTTTCTTTCTTTTTTTTTTTTTAGATAAGCATGTAATAATAATTACTGCCTCCCT chr4 + 94230402 36183638 36183637 36183697 36183638 36183637 36183697 60 TTTTCTTTTCTTTCTTTTTTTTTTTCTGTGTCAGCATTTGAAAACAAGTGATGTCTTCTT .........................:.:x:.x.....x.:.x..:..x.:x..:..:.:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 5196826 NA +3691 chr4 + 190214555 41387974 41387973 41388052 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAAGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x............::.:x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -34645227 -59585175 +3057 chr4 + 190214555 41396514 41396513 41396562 49 TGCGGGTTTTTTTTTGTTTTGTTTTCTTTTGTTTGTTTGTTTGTTTTTG chr4 + 94230402 33814291 33814290 33814339 33814291 33814290 33814339 49 TGTGGGGTTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTG ..:...x........x...x.x...:................xx..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 7582223 NA +3068 chr4 + 190214555 41396514 41396513 41396559 46 TGCGGGTTTTTTTTTGTTTTGTTTTCTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 44968069 44968068 44968114 44968069 44968068 44968114 46 TGCAAGTTTCCTTTTATTTTATTCCCTTTTTTTTGTTTGTTTGTTT ...::....::....:....:..::.....x............... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -3571555 -90658847 +3012 chr4 + 190214555 41419519 41419518 41419588 70 GTGAAGCTTATGGAAGAGCCTACATTTTCTTCCTTTCCTTTCCCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 35538594 35538593 35538663 35538594 35538593 35538663 70 GTAAAACTTTTAAGGGAGCCTATGTTTTGTTCTTTTACTCTCACCCTCCTTCCCCCAGCCCTTATCTTCT ..:..:...x.::::.......::....x...:...x..:..x..:.......::.xx:....x::.:.. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 5880925 NA +3331 chr4 + 190214555 41419551 41419550 41419738 188 CTTTCCTTTCCCCTTC-------CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCGTCCTTCCTTC--------CTTCCTTCCTTC--CTTCCTTCCTCCTTCCTTTCTTCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTTCTTCCTCC chr4 + 94230402 63998059 63998058 63998257 63998059 63998058 63998257 199 CTTTATCTTCTCTTTCAGAGAAACTTTTCTTTTTGATTTCTTTTTCACATCCTTCAGTTCATC--TCATTCACAGTAAACATACTACCTATGATTGCCTTGAACTTTTCCTT--TCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCT--CATTCTACCTTC ....x::...:.:...-------...:::.::..xx..:...::.:x.x......xx.:.:..--..x...--------.x.x..x...x:--:.x....xxx.:..:.:..--.....:.:x:x...:.........x..x:.:.:......xx......:.:x:...:.x:....::x:....:xx...--.x....x...:. 16M7I40M2D6M8I12M2I19M2D77M2D12M 116/182 63.7% 199/94230402 0.0% 23/182 12.6% -22578508 -71651894 +4021 chr4 + 190214555 41419605 41419604 41419757 153 TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCC-TTTCTTCCTCCTTCCTTCCTTCCTTC--CTTCCTTCCTTCCTCCTTCCTTCCTTCCTT-CCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTTCTTCCTCCCC--TCCTTCTTTTCTTCCTT chr4 + 94230402 50176268 50176267 50176426 50176268 50176267 50176426 159 TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .:..x:..:x..x.::.....:.......:x...x:..-:..:.x.x.:x...:...:x.:...:--x...x..::.x:..:...:...:....xxx-..:x...:..:x::...:.x:.......:......:....:.--.:....x:x.x.:.... 38M1I26M2I30M1I42M2I17M 98/153 64.1% 159/94230402 0.0% 6/153 3.9% -8756663 -85473739 +3203 chr4 + 190214555 41419643 41419642 41419703 61 TTTCTTCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 57538450 57538449 57538510 57538450 57538449 57538510 61 TTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC .......:..x:...:........:.:x.:x..:::..:.....:x....:...:....:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -16118807 -78111595 +3206 chr4 + 190214555 41419728 41419727 41419792 65 TTTCTTCCTCCCCTCCTTCTTTTCTTCCTTCCTGCCCTTTTCCCTCCTCTCCTTCCTTTCTTCCT chr4 + 94230402 56436013 56436012 56436077 56436013 56436012 56436077 65 TTTTTCCCCCCCCCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTTTTTCCT ...:.:..:....:.:..:....::...::..::...x:::...:...:.::..::...:..... 65M 42/65 64.6% 65/94230402 0.0% 0/65 0.0% -15016285 -79214117 +3731 chr4 + 190214555 41421953 41421952 41422025 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGAAGGCAAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.x..x...x::........::....x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -34611252 -59619150 +3002 chr4 + 190214555 41424147 41424146 41424197 51 CTTTCCCTCTCTCCCTCCCTCCTTCTCTCCCTCTCTCTTTCTCTCCCTGTG chr4 + 94230402 41645511 41645510 41645561 41645511 41645510 41645561 51 CTTTCCCTCTCTACTTCCCCCCACCCCCCCCCGCCTTCTTCTCTCTCTGTG ............x.:....:..x:.:.:...:x:..::.......:..... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% -221364 -94009038 +3088 chr4 + 190214555 41444275 41444274 41444326 52 TATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .....:....:..:::.:..::.......:...x.:.x......:....... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -3371325 -90859077 +3032 chr4 + 190214555 41444988 41444987 41445049 62 ATGAAGAGAATATTCAACAACATTTTCCCATTCTTTTTTTTTTTTTTTTTTTGAGACACCCA chr4 + 94230402 78410396 78410395 78410457 78410396 78410395 78410457 62 ATAAAGGAAATTTCTTATAAAATTCTCCCAGCTTTTTTTTATTTTTTTCTTTGAGAATCCCA ..:...::...x.::x.:..x...:.....x::.......x.......:.......xx.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -36965408 -57264994 +3259 chr4 + 190214555 41450786 41450785 41450861 76 CTCTCTCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGTTGTAGGGGATGTTGCTGTACAGTTTGGGTACTTACA chr4 + 94230402 26392944 26392943 26393005 26392944 26392943 26393005 62 CTCTCTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAAT--------------CACATTTTGGATACTTATA ................................:.x..x.xx:.--------------:...x.....:......:. 43M14D19M 52/62 83.9% 62/94230402 0.0% 14/62 22.6% 15057842 NA +3170 chr4 + 190214555 41472347 41472346 41472434 88 TCCCTGCCCCTCCCTTCCTCCCTCTCTTTCCTTCCTTCCTTCATTCCTCTCTCTCTCTCTTTCCTTCCTACTTTCTTCTTTTTCTTTC chr4 + 94230402 14172995 14172994 14173082 14172995 14172994 14173082 88 TTCCTTCTTGGCCCTTTCTCTCTCTCAGTTCATCCTTGCCTGTTTTCTCTCCTGCTCTACTCCCTTGCTGCTATTTTTTTCTTTTCCC .:...x.::xx.....:...:.....xx.:.x.....x.:.xx..:.....::x....x:.:....x..:..x.:..:..:..:.::. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 27299352 NA +3037 chr4 + 190214555 41472382 41472381 41472439 58 TTCCTTCATTCCTCTCTCTCTCTCTTTCCTTCCTACTTTCTTCTTTTTCTTTCTTTCT chr4 + 94230402 76399310 76399309 76399367 76399310 76399309 76399367 58 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTGCTTTTTTTCT .........::........:....:.x..:...:.:.xx:.:.x.:.x....:..... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -34926928 -59303474 +3120 chr4 + 190214555 41472382 41472381 41472439 58 TTCCTTCATTCCTCTCTCTCTCTCTTTCCTTCCTACTTTCTTCTTTTTCTTTCTTTCT chr4 + 94230402 76394490 76394489 76394547 76394490 76394489 76394547 58 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTCCTTTTTTTCT .........::........:....:.x..:...:.:.xx:.:.x.:.:....:..... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -34922108 -59308294 +3398 chr4 + 190214555 41474358 41474357 41474429 72 GCACCTGTAGTCCCAGCTACTCAGTAGGCTGAGGCAGCAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:::x........x.xxxx...x.:...........:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -34558848 -59671554 +3669 chr4 + 190214555 41483961 41483960 41484111 151 AGCCCTTGGGCAAGTTACTTAACCTTTCTGTGCCTGGATTTCTTTGGCTTTAAAATAGAAGCAATAAT-----CAAACACCATAAAGTTGTTATGAGGTTTAAATAAATTAATGTGACAAGCATTTAGAA----CAGAGAGGGCATATTGTAGTTGTGAT chr4 + 94230402 83501140 83501139 83501293 83501140 83501139 83501293 154 AGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGG-CTAAATCAATTCCTGT-----TTATTCAGGATCTTCAGAGTGAGTACATAATATTAGTAGT ..x.::.......:...........x.x.......x::...:::::x..x......:..:x::...:.-----.xx..x:..:.::.x.:..:.....-:.....x....xx...-----x:...:..:.----.....x.:.:.:..x:..x.x..::. 68M5I25M1D16M5D10M4I26M 95/145 65.5% 154/94230402 0.0% 15/145 10.3% -42017179 -52213223 +3340 chr4 + 190214555 41486949 41486948 41487018 70 TATATATATATACACACACACACATACATACACACACACACACACACACACACATATATATATACACACG chr4 + 94230402 54963193 54963192 54963262 54963193 54963192 54963262 70 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACG .:.....x:.....x.::.....x..:.............xx...:::.:.x....:.:.:..x:.:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -13476244 -80754158 +3177 chr4 + 190214555 41486972 41486971 41487022 51 ATACATACACACACACACACACACACACACATATATATATACACACGTACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...:...:........x.x....:.......::.:........x..x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -4653884 -89576518 +3260 chr4 + 190214555 41494276 41494275 41494417 142 ATTATTGAAAAA---AAATTATATATATATAATTATATATATACACACATACATATATATACACATACATATATATACA-TACGTACACATACACATACATATATACACATACA--TACATATACGTACATACACATAAACATACATA chr4 + 94230402 66642192 66642191 66642339 66642192 66642191 66642339 148 ATAAATGGAAAAGGTAAGCTATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACAGTTAGTGCATGAAGCCATCAATTTAAGTAATTACAGCTGCATTTACTGAAGTAGAGATAGGAACATATA ..x.x..:....---..::....::......x.x....x:......xx..::........:x.:..:..:...:.....-.xx..:..::x.xx...xx..x..x::.xx....--.:...x...xx.x:..x.x...::x.:.:... 12M3I64M1I34M2I32M 92/142 64.8% 148/94230402 0.0% 6/142 4.2% -25147916 -69082486 +3060 chr4 + 190214555 41494403 41494402 41494463 61 ACATAAACATACATATATACACATACATAGTTATATATATGTACACACACATACACACACA chr4 + 94230402 23247714 23247713 23247774 23247714 23247713 23247774 61 ACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..x.:.x...:::.:...:....:....xxx.:x.:.............:.:......... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 18246689 NA +3026 chr4 + 190214555 41501849 41501848 41501905 57 GTAGAATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAACCTTCAATTTT chr4 + 94230402 14587473 14587472 14587529 14587473 14587472 14587529 57 GCAGGGTTTTTTTTTTGTTGTTGTTTGTTTGTTTTTTTGAAAGAAGCCTTCAATGTT .:..::.::.......x..x..x...x...x.......:...:..:........x.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 26914376 NA +3008 chr4 + 190214555 41530789 41530788 41530837 49 CCGCCTAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTTTTTTTT chr4 + 94230402 22824085 22824084 22824133 22824085 22824084 22824133 49 CCAATTAAAGAAAAAAAAAGAAAGAAAACCATTTTCTTTCTTTTTTTTT ..:x:....:.........:...:....xx.....:...:......... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 18706704 NA +3323 chr4 + 190214555 41568878 41568877 41568968 91 TCTTATTACATTTTTTCTTCTCTTTTTTTCTCTTTGTGTTTTTAGTCTGTCATTCTCTTGATCTTCTACATATGGTGTAATGAAAATATGC chr4 + 94230402 86519012 86519011 86519096 86519012 86519011 86519096 85 TCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTTCTGAATGCTTTCCAAGCT------TGAAAACATGC .......x..x.....::.:.:.........:...x..:......:.:x.x...:...x:..x:.:.x..x::x------......:.... 74M6D11M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% -44950134 -49280268 +3473 chr4 + 190214555 41581666 41581665 41581748 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:...........::...:....x.xx.x...x.::.......::.:..x:xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -34451531 -59778871 +3062 chr4 + 190214555 41584669 41584668 41584707 39 CTGTTTTTTTTGTTTGTTTGTTTGTTTTGCATTTTTATA chr4 + 94230402 12568756 12568755 12568794 12568756 12568755 12568794 39 CTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTA .............................:x.....x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 29015913 NA +3187 chr4 + 190214555 41586023 41586022 41586100 78 CTCATCTCCTCTCTTTTCCTTTCCCTTCCTTTCCCTCCCCTCCCCTCCGCTCCCTCTCCTCCCCTCCCCTCCACTCCC chr4 + 94230402 33999273 33999272 33999350 33999273 33999272 33999350 78 CTTCTCTCATCTGTTTCCCTGAGCTATCTCGTCTTGTTCCTCCCTCCCACTCCCACTTCTCACCTCCCCTCCCTTCCC ..:x....x...x...:...xxx.:x..::x..::x::......::..:.....x..:...x..........x:.... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 7586750 NA +3110 chr4 + 190214555 41586036 41586035 41586161 126 TTTTCCTTTCCCTTCCTTTCCCTCCCCTCCCCTCCGCTCCCTCTCCTCCCCTCCCCTCCACTCCCCTCCCCTCCTCTCCCCTTCCCTTTTTGAAACAGGGTCTCACTCTGTCACCTAGGCTGGAGT chr4 + 94230402 93320951 93320950 93321076 93320951 93320950 93321076 126 TTTGTCTTTTCTTTGTTTCCCCACCTCACTATTCTGAGAATGTTCCTCTTCCCCCCTCCACCCCCCCCCCCCCAGTTTTTATTCTCTGCATAAAAGCAAGCACTACACCACTAACAATGCTGAAGT ...x:....:.:..x:..:...x..:.x.:x:..:.xxxx:x:.....::.:.........:....:....:.xx:.:::x...:..x:x.:...xx::.:x::..x.::::.x.x.x....:... 126M 70/126 55.6% 126/94230402 0.0% 0/126 0.0% -51734915 -42495487 +3011 chr4 + 190214555 41611070 41611069 41611122 53 AGTCAAATCCTGAAAGCTTTTGGTCCCAAGCATTTGGATAATGGAGACTCAAT chr4 + 94230402 67255174 67255173 67255226 67255174 67255173 67255226 53 AATTAAACCCTGAAACCCCTTGATACCAAGCATGTGGATAATAAGGAATCAAT .:.:...:.......x.::...:.x........x........:::..x..... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -25644104 -68586298 +3178 chr4 + 190214555 41623637 41623636 41623703 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -34409574 -59820828 +3096 chr4 + 190214555 41638079 41638078 41638135 57 GGCATTTGTGGGAGCTGTGTTGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTT chr4 + 94230402 44383923 44383922 44383979 44383923 44383922 44383979 57 GGCCTTTATAGAGGTTGTGTGATCCTCTTGGTGTTGTTTTTGTTGTTGTTGTTTTTT ...x...:.:.::.:.....x:.::.x...x.......x..............x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -2745844 -91484558 +3806 chr4 + 190214555 41666977 41666976 41667049 73 TGCGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x.x....:...........::........x.xx.x...x.:...........:..x:.x:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -34366228 -59864174 +3079 chr4 + 190214555 41742586 41742585 41742668 83 TGGCTAATTTTTCTTTCCTTTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTGCTTAGGCAGGTTTCCAGCTCCT chr4 + 94230402 44980299 44980298 44980381 44980299 44980298 44980381 83 TAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAGATGTTTGCTGCTTCT .:.:.x....xx.:.........:.::..:.x::.....:......:.........xx.x.xx.:::x.x....x.x...:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -3237713 -90992689 +3057 chr4 + 190214555 41742592 41742591 41742645 54 ATTTTTCTTTCCTTTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 65932360 65932359 65932413 65932360 65932359 65932413 54 ATATTTCTGTAATTTTTTTCTGTTATCTCCTTGCTTTTTTTTTTTGTTTTTTTT ..x.....x.xx.........x..x.:.:...x............x........ 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -24189768 -70040634 +3046 chr4 + 190214555 41743995 41743994 41744077 83 TAAAAAAAAACTTAAAAAAAAAAAAACAATGACCAACCAAAAAAAAAAAAAAAAAAAAAGAATCAAGAAAAAGAAGAGTTCAA chr4 + 94230402 12595439 12595438 12595521 12595439 12595438 12595521 83 TAGAGGAAAGGGGAAAAAAAGAAAACCACCAACCAACCAAAACACAAAAAAACAACCCAGCAACTACAAAAAAAAAGGCTTAA ..:.::...:xxx.......:....x..x::...........x.x.......x..xxx..x.x.x.x.....:..::.:.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 29148556 NA +3273 chr4 + 190214555 41757614 41757613 41757682 69 ACACACACTTCTTTTCTTCTCTCTCTCTCTCTTTTTCTCTCTCCCTCTCTCTCTCCCTCTCCCTCTCCG chr4 + 94230402 12085011 12085010 12085079 12085011 12085010 12085079 69 ACACAGACCCCACTTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACTG .....x..::.x:...:.:::x:.x.:..x...::.............:........:.::....x.:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 29672603 NA +3828 chr4 + 190214555 41768801 41768800 41768872 72 GCACCTGTAATTCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:..............:........x.xx.x...x.:.........:.:.:x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -34264405 -59965997 +3905 chr4 + 190214555 41773768 41773767 41773846 79 GTGGTATATGCCCATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAACCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....::.:.:--:....:...........::........x.xx.x.:.x.............:..x..x:.....:.. 11M2D66M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -34259433 -59970969 +27017 chr4 + 190214555 41784687 41784686 41785086 400 CTTTCATCTTTCTCTGATACTGGGGATGGACGAAGGCCTTGTGTCTAATAA-GTCATTTGCATCAGCATGTCCCAAATGACCAAGAGA-TGAGGATGGGAGAGATTAGCATGGTAATCTCATTCTGATGGATAAAATTAGCAGAGATATTCCCCACAAATGGAGAGCTGCCGTTGGCGAACTGCTGTGCTTAGAATCAATTACTAAATTACTTTGAGCTCTAAGTTGACATTAACAGAAAAAAATTGCCATCGACTGAAGGGAAATAAGATAAAAAATATGCGATCATTAAATCTCTCGCTACTATTCACGAATGTGACTCACAAGAATGGTACACAAAATAGGGCAGAATTTAATTTTTAACAGTGCCCCCTGTCAACATTTCATCCTGAGCTTCTCTGTG chr4 + 94230402 70327595 70327594 70327989 70327595 70327594 70327989 395 CTTTCATTTCTCTCCTGTCCCGAG------TGAAGGGTTTGTGTTTAATAACATCGTTTGCATCAGTGTGTCCCAACTGACCAAGGTACTGGGGCTGGGAGAGATTAGCATGGTAATCTCATTCTGATGGATAAAATTAGCAGAGATATTCCCC-TGAATGGATAGCTGCCATTGGCGAGCTGCCGTGCTTAGAATCAATTACTAAATTACTTTGAGCTCTAAGTCGACAGTAACAGAAAAAAATTGGCATCGACCGAAGTGAAATAAGATAAAAAATATGCGATCATTAAATCTCTCACTACTATTCGCGAATGTGGCTCACAGGAACTGCACAAAAAATAAGGCAGAATTTAATTTTTAACAGTGGTCCCTGTCATCGTTTCAACCAGCGCTGCGTGGTG .......:.:....:x:.x.:.:.------:.....x:......:......-:..:..........::........x........:x.-..:..x...........................................................-::......x.......:.......:....:........................................:....x................x.......:....x.....................................:.........:........:......:...:x.:...x......:........................x:........x.:.....x..x.x...x.x:x... 24M6D21M1I36M1I65M1D247M 341/393 86.8% 395/94230402 0.0% 9/393 2.3% -28542908 -65687494 +32949 chr4 + 190214555 41785602 41785601 41786196 595 AAAGAAGCTTTAAAATAGCTTTTTTTTTTTTAAGCCAGGGCCTGGGGAATCCCAGTGGCATA-GTAATTGTTAATATTATTAGCACAATATACATATCAGCTGTCGAGATATTATGAGGACTTGAATTCAGTCTCTGTTAGGGGAGTCAGGGTCAACATCATTAACTATAGATCTTGTCTCAGTTTCCATATAGATGCCTCAGGGCAAGTGTCTGCCAAATACATCTCTATAGATGGGCACAACCATAGGATATACAAGAGACCCATCACACACATCAGTAATAGACAACAAGCTTTTGTTTATCTGAAGGTTTACTGGAATTAACTGATTAGTGTCAACTTGACACAATAACTTTTGTCTACAATGCAGTAGATCATTTTGATGGTTTTATTGATGGAGTGTGTTGTCTAATGTAAATCATAGGGGAGGTTGAATTTAGATAAAGTCTGGCACATTTTTCTTAAGAGGAAACTGAAAAAGCTGTTTGTAAATGCACCCTTGACAGGCCACCTTCTGCAGTCTTATAGAT---ATTAAGATAGTAATTGTGATATTAATAATAATAATTACAAGGGAGAGTTGTAATTGAAATGTATGC chr4 + 94230402 70328892 70328891 70329473 70328892 70328891 70329473 582 AAAGAAATGTGAAAGAACCTTTTATCAGCTTTAAACAGTG-----GGAATCACAGTAGCATAAGTAATTGATAATATTATTAGCACAGTATACATATCAGCTGTCGGGATATTATGAGGACT-GAATCCAATCTCTGTTGAGGGAGTCAGGGTCAACATCATTAACTATAGATCCTGTCCTGGTTTACATATAGAGCCCTCGGGCCAAGTGTCTGCCAGATACATCTCTATAGATGTGCATAGCTATAGGACATACAGGGGGCTAATCACACACATCAGTAATAGACAACAAGCTTTTGTTTATCTGAAGGTTTACTGGAATTAACTGATTAGTGTCAAGTTGACACAATAACTTTTGTCTACAATGTAGTAGATCATTTTGATGGTTTTATTGATGGA--GTGTTGTCTAATGTAAATTGTAAGGGTAGCTGA------ATGAAGTAGGAAAGATTGTAGTTAAACAGAAATTCAAAAAGCCACTAGGAAGCCTATTTTTAAAATGTCACATTCTGTAGCCCTACGGATGCCATAATAATGGTAACAGTGATGGCAACAACAGTAA--ATAAGGGA-ACTTAAAGTGGAAATAGACGC ......::x.x...:x.x.....x.:xx:..x.:x...x.-----......x....:.....-.......x................:..................:...............-....:..:........::.................................:....:::....x........xx....:..x.............:.................x...:.:.:......:.....:.:.:.:x..........................................................................x...........................:...............................--..................::..:...x:.:...------..:....xx.:x.x...x.xx....:x:....:.x.......:::.x.x..::x:.:::..:.x.x.:...x.....:..:.:..::...---..x.x:..:....:x.....:x:..:..:.:...--.:......-.x..:x.:.x.....:x.:.. 40M5D17M1I59M1D276M2D33M6D90M3I34M2D8M1D21M 468/578 81.0% 582/94230402 0.0% 21/578 3.6% -28543290 -65687112 +3523 chr4 + 190214555 41804544 41804543 41804618 75 GATGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAATCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::.x....:.............::........x.xx.x...x.x......:....:..x:xx:..:..:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -34228659 -60001743 +3113 chr4 + 190214555 41807702 41807701 41807777 76 TTTGTTGCTCACTAGCTGTATGGCCTTTGACAAGTCACTCAATCTATAGAAGCCTCCGTTTCCCCATATGTAAAAT chr4 + 94230402 79037097 79037096 79037172 79037097 79037096 79037172 76 TTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAAT ...:..x..x..x.........:....x.:x....:.:.:x..:...xx:..::..x:..:.:...x:.:...... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -37229395 -57001007 +3172 chr4 + 190214555 41816274 41816273 41816320 47 TTTTTTTGTTTGTTTGTTTGTTTTGTATTTGTTTTGAGAAGGAGTCT chr4 + 94230402 89314598 89314597 89314644 89314598 89314597 89314644 47 TTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGGGAAGGGGTTT ..........................x.....xxx.:.....:..:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -47498324 -46732078 +3237 chr4 + 190214555 41821012 41821011 41821067 56 TTTTGGGTTTTGGG-------------TTTGGTTTTGTTTTGTTTTTTGTTTGTTTGTTTGGTACTTTT chr4 + 94230402 12151615 12151614 12151683 12151615 12151614 12151683 69 TTTTGAGTTTTGGGGTGGGTTTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTTTTGGGGGTTTTT .....:........-------------........x....................x..x..x::.... 14M13I42M 49/56 87.5% 69/94230402 0.0% 13/56 23.2% 29669397 NA +3317 chr4 + 190214555 41839701 41839700 41839760 60 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAGCCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:...........::........x.xx.x...x:::....:.....:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -34193504 -60036898 +3141 chr4 + 190214555 41842251 41842250 41842391 141 TTTTCCTTCATTCAGCTTCACAGCCTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAG--------ACTGAGTC-TTGCTGTATCGCCCAGGCTGAAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCACCTCCC chr4 + 94230402 14401503 14401502 14401650 14401503 14401502 14401650 148 TCTTTCTTCATCTGTAGCCATAATCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTTAAGAGAGCTCTTTATAGAGTTATCACTATACTACTT--TCTTAAGTAATGGGAAAGGATTCTGGATATCTTCAACTTCTCCCTCTC .:..:......:::xxx:..:.::.:x.....:..:.:::.......:.....:..........xx...--------.:x....:-.::..:..:::.::--x..x....:xx.x.:x:x...::...x.xx..x....:..:x....:. 69M8I8M1I14M2D48M 85/139 61.2% 148/94230402 0.0% 11/139 7.9% 27440748 NA +3055 chr4 + 190214555 41843192 41843191 41843268 77 AGTGG-GCGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....-..:.x....:.:.........:x.:........x.xx.x...xx:........::.:..x.xx:..:..:.. 5M1I72M 54/77 70.1% 78/94230402 0.0% 1/77 1.3% -34190008 -60040394 +5602 chr4 + 190214555 41843802 41843801 41843951 150 TTTCACCTCTCTGAGCATGTCTTAGAATATTCTGAGAAGCTGACTGAAGCATCTGTGTGCTTCATCTTGGGCTCCTCTCAACAAGTTTGCACAGGGAGGGAATATTATGACATTTTTACTCTCGGCTTCTTAGCATCTGTTTGGCCCATG chr4 + 94230402 44741055 44741054 44741204 44741055 44741054 44741204 150 TTCCACCGCTCCGAGCACTTCCGCGAGAACTCGGCGAAGTTGACTGACGAGTCCGGGTGCTTCTTCTTGTGCTCCTCGCGGCACGTCTGCACGAAGTACGCGTACGAGGACATCTTGCCCCGCGGCTTGTTGGGGTCGCCCTTGCCCATG ..:....x...:.....:x..:xx..:x.:..x.x....:.......x.x:..:.x.......x.....x.......x.::..x..:.....:::.x:x.x:..:x.x.....:..xx.:.x......x..:.x:..xx::.x....... 150M 99/150 66.0% 150/94230402 0.0% 0/150 0.0% -2897253 -91333149 +3360 chr4 + 190214555 41848970 41848969 41849094 125 AATGCAAGA-ATTCCTTGTAT----CCATACATCAATCCTAGGAACA---TTCTGTTCTTTTTATTTTATTTTATATATATATATATATATATATATATATA----TATATATATATATATATTTTTTTTTTTTTTT chr4 + 94230402 77957716 77957715 77957848 77957716 77957715 77957848 133 AATGGAAGATATTTCTTTTACAGCACTAAGTACTATTTCAAGAAAGAGGCTTCAGCTATGCTTATTTT----TATGTATGTGTTTATATATATGTATGTAAAGTATTATATATAACAAGATGTTTTTTTTTTTTTTT ....x....-...:...x..:----.:.x::.::.x.:.x..:..x.---...x.:.x.x:.......----...:...:.:.x.........:...:..x.----........xxx.x..:............... 9M1I11M4I22M3I18M4D30M4I31M 89/121 73.6% 133/94230402 0.0% 16/121 13.2% -36108746 -58121656 +3500 chr4 + 190214555 41849029 41849028 41849104 76 TATTTTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823259 7823258 7823334 7823259 7823258 7823334 76 TATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT .......:...:.........:.:......x.:.:x.x..x.xx.x..x:x..x..:..............x:... 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 34025770 NA +3318 chr4 + 190214555 41849033 41849032 41849106 74 TTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823261 7823260 7823334 7823261 7823260 7823334 74 TTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..x..:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 34025772 NA +3473 chr4 + 190214555 41849038 41849037 41849108 71 TATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.x...:...x..:..............x:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 34025774 NA +3259 chr4 + 190214555 41849040 41849039 41849110 71 TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.xx..:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 34025776 NA +3045 chr4 + 190214555 41849042 41849041 41849112 71 TATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xxxxx..:...x..:..............x:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 34025778 NA +3259 chr4 + 190214555 41849044 41849043 41849114 71 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x..xxxx..:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 34025780 NA +3490 chr4 + 190214555 41849046 41849045 41849166 121 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTACTC---TGTCACCCAGGCCAGAGTGTAGTTGCATGATC chr4 + 94230402 7823264 7823263 7823385 7823264 7823263 7823385 122 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAG--TGCTTCTTATTCTAATGTTGTTTAAATGACATTGTAATTGCCTTGTC ..:...:.........:.:......x.:.:x.x..:..xxxx..:...x..:..............x:...x:..--x.xx.....:..---...:::::.:::x.x.x....:....x.x:.. 75M2D12M3I32M 79/119 66.4% 122/94230402 0.0% 5/119 4.2% 34025782 NA +3017 chr4 + 190214555 41849059 41849058 41849097 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 17056433 NA +3187 chr4 + 190214555 41849065 41849064 41849118 54 ATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 47077444 47077443 47077497 47077444 47077443 47077497 54 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTTG .......:......x.....x:...x:x...:.xx................... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -5228379 -89002023 +3391 chr4 + 190214555 41849067 41849066 41849135 69 ATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTACTCT chr4 + 94230402 47077444 47077443 47077512 47077444 47077443 47077512 69 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTTGGTAGTGTGTCCCTCT .......:............x:...x:x...:.xx................xx.::..x..x.:x.... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% -5228377 -89002025 +3142 chr4 + 190214555 41868711 41868710 41868792 82 CATATATACATATATACACATATATACATATATACACATATACATATATACATATATATATACATATACATATATACATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ...::....x.x.x....:..::.x.x...:..::.:::.....x.xx...x.:.:....:.:..:.:......x...x... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -34508146 -59722256 +3235 chr4 + 190214555 41868747 41868746 41868833 87 CATATACATATATACATATATATATACATATACATATATACATATATACATATACACATATATATACACATATATACACATATATAT chr4 + 94230402 29286191 29286190 29286277 29286191 29286190 29286277 87 CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTAT ..........:.::..x.x::.......x...x.x.x.....xx:x:...x...:.:.:....x.::.:x...x..:..:...x... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 12582556 NA +3199 chr4 + 190214555 41868768 41868767 41868884 117 ATATACATATACATATATACATATATACATATACACATATATATACACATATATACACATATATATACACATATATATACACACATATATATACACATATATATATACACATATATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATT--TATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x.:.x.......:.:.::x.x.:.:x:::..:x--.....:...x..:......x.:.:..:x..:..:...:..:x..::.x.x.:.:..:.::.:...:x...::...::.:. 35M2D80M 68/115 59.1% 115/94230402 0.0% 2/115 1.7% 20759581 NA +3118 chr4 + 190214555 41868894 41868893 41868931 38 ATATATACACATATATATATATACACACACACACACAC chr4 + 94230402 85078510 85078509 85078547 85078510 85078509 85078547 38 ATATATACAGATATCTATATATACACACACACACACAC .........x....x....................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -43209616 -51020786 +4077 chr4 + 190214555 41919867 41919866 41919967 101 CATGGTGGTGTACACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAAAATCACTTGAACCTGGAAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::......--...x....:.:............:........x.xx.x:..x..........::....x.xx:..:..:..------..x..x...... 10M2D71M6D12M 71/93 76.3% 93/94230402 0.0% 8/93 8.6% -34113330 -60117072 +3289 chr4 + 190214555 41945941 41945940 41946019 79 AGCCTGGGCAACAGAGTGAGACTCTGTCTCACCAAAAAAAAAAAAAAAAAAGAA--------------------AAGGAAAAAAAAAAGTGTTATTCTG chr4 + 94230402 75358304 75358303 75358396 75358304 75358303 75358396 93 AGCCCAAGCAACAGA------TTTTGTTTCACCAAAAAAAAAAAAAAAAAAGAAACATTCTATCTTATAAAGGCAAGGAAAAGAGAGTGGGTGATACTG ....:::........------:.:...:..........................--------------------........:.:.:x.x..x..x... 15M6D33M20I25M 60/73 82.2% 93/94230402 0.0% 26/73 35.6% -33412363 -60818039 +3010 chr4 + 190214555 41958667 41958666 41958729 63 CTTGGCTTGTAGAGACAACTAGTTTCTCTCGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 6141939 6141938 6142001 6141939 6141938 6142001 63 CCTTGTTAGTAAGTATAACAGTTTTCTCCTGTTCATTTTTCATTTCTTTTTTTTTTTTTTGAG .:.x.:.x...::x.:...x:x......::.:..x.....:x...:................. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 35816728 NA +3096 chr4 + 190214555 41963613 41963612 41963682 70 CGTAGTGGCTGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:--..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -34069584 -60160818 +3471 chr4 + 190214555 41995120 41995119 41995202 83 CATGGTGGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x....:.:...........::........x:xx.x...x::...........:..x:xx:.....:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -34038077 -60192325 +3698 chr4 + 190214555 41996894 41996893 41996976 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -34036303 -60194099 +3191 chr4 + 190214555 42004621 42004620 42004684 64 TTTTTAACTTAAATGATTATATTTTCCTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTGAGACCA chr4 + 94230402 77593087 77593086 77593150 77593087 77593086 77593150 64 TTATCAACTTAACTGCATTTATTTTCTTTTATTTTGTCTTCATCTGTGTTTTCTTTTGAGATCA ..x.:.......x..xx.x.......:...x....x....:x...x.x....:........:.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -35588466 -58641936 +3539 chr4 + 190214555 42007617 42007616 42007699 83 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTCGAACCCAGGAGGGAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........:.::........x.xx.x...x.:..:........:..xxxx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -34025580 -60204822 +3211 chr4 + 190214555 42040656 42040655 42040738 83 CGTAGTGGTGGGCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......x:..--......:............:........x.xx.x...xx::x.......:.:..x.xx:.x:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -33992541 -60237861 +3671 chr4 + 190214555 42071523 42071522 42071601 79 CACAGTGGCACATGCCTATAGTTCCAGCTACTTGGGAAGCTGAGGCAGGAGGATCACTTGAGGCCACGAGTTTGAGGCT chr4 + 94230402 76033197 76033196 76033273 76033197 76033196 76033273 77 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ........::..:.--.:................::.:......x.xx.x.:.x.......:x...x:..:..x:.... 14M2D63M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -33961674 -60268728 +3121 chr4 + 190214555 42072792 42072791 42072851 60 TCTTGCTCTATTGTTCTATCCTTTTTTTTTTTTTTTTTTTAGATGGAGTTTTGTTCTTGT chr4 + 94230402 40429933 40429932 40429992 40429933 40429932 40429992 60 TCCTTCTCCCTTGCTCTCTCCTTTTTTTTTTTTTTTCATTAAATATCTTTTTGCTCTTAT ..:.x...:x...:...x..................:x...:..:xxx.....:....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 1642859 NA +3295 chr4 + 190214555 42074993 42074992 42075077 85 TTTTAGAAAATTGATTTAGAGTTAATGAATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792583 24792582 24792664 24792583 24792582 24792664 82 TTTTTGAAAACAGTGTGAGAAAGAACAGAATTACTTATGTA---AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ....x.....:x.xx.x...:xx..:::.xx..:x...:..---.x...................x:........x......... 41M3D41M 61/82 74.4% 82/94230402 0.0% 3/82 3.7% 17282410 NA +3245 chr4 + 190214555 42075022 42075021 42075113 92 TATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTACTCTGTTG chr4 + 94230402 7823264 7823263 7823355 7823264 7823263 7823355 92 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCTTATTCTAATG ..:...:.........:.:......x.:.:x.x..x.xxxxx..:...x..:..............x:..x::.xx.xx.....:...:x.. 92M 62/92 67.4% 92/94230402 0.0% 0/92 0.0% 34251758 NA +3140 chr4 + 190214555 42075024 42075023 42075089 66 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.x..x..xxxx..:...x..:.............. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 34251760 NA +3145 chr4 + 190214555 42075028 42075027 42075086 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 8824025 NA +3039 chr4 + 190214555 42075030 42075029 42075105 76 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTA chr4 + 94230402 33251003 33251002 33251078 33251003 33251002 33251078 76 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAAAGAATATTA .:.:.:.:.:.:.......:.:........xxx.....x...x.....x..x.......x:x:::.x...:.x... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 8824027 NA +3001 chr4 + 190214555 42091789 42091788 42091879 91 CCTGGGAGACAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTAAATAGACTAAAATATATACTTGCTAGTATTATA chr4 + 94230402 29136851 29136850 29136941 29136851 29136850 29136941 91 CCTGAAAAACAAAACAGATCAGTATGCAAATTAAAAAAAAAAAAGAAAAAAGATGACAAGTAACGCAAAATCTTTACATGTTAGTAATGTA ....::.:...:x.x::x..x..x.xx...xx............:.......x.xx:..:..:xx:.....x.x...x..:.....x.:.. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 12954938 NA +3467 chr4 + 190214555 42093592 42093591 42093692 101 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:.--...x......:...........::..:.....x.xx.x...x::........::.:..x:xx:..:..:..------..x..x...... 10M2D71M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% -33939605 -60290797 +3965 chr4 + 190214555 42145551 42145550 42145651 101 ACATGGTGGCGCGCACCTGTAGTCCCAGCTACTCGGGGGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGACAGAGGTTGCAGTGAGCCAAGATGGTGCC chr4 + 94230402 76033196 76033195 76033288 76033196 76033195 76033288 93 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCC ...::....:..--..x......:.........:.:::.......x.xx.x...x.:..............x:xx:..:..:..------..x...:.... 12M2D70M6D11M 69/93 74.2% 93/94230402 0.0% 8/93 8.6% -33887645 -60342757 +3169 chr4 + 190214555 42157872 42157871 42157931 60 TGCACCTGTGGTCCCAGCTGCTTGGCAGGCTGAGGCAGAAGAATCACTGGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x...:..:......:....:x........x.xx:x...x....x......:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -33875333 -60355069 +3009 chr4 + 190214555 42157998 42157997 42158054 57 TCTCAAAAAAATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857600 6857599 6857656 6857600 6857599 6857656 57 TCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ..::x..:.........:..:::.::..:.:x:.........x...........x.. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 35300398 NA +3256 chr4 + 190214555 42173910 42173909 42173968 59 CTGTTTCTGTTTTTTTTTTTCTTTTCTTTTCTTTTTTATTTTTTTTTCTGTGAGTCAGA chr4 + 94230402 27089790 27089789 27089848 27089790 27089789 27089848 59 CTGCTTATGATTTTTTTTTTACTTTACTTGTCTTCTTATTTATTTTTCTGTGTGTCAGA ...:..x..x..........x:...x:..x::..:......x..........x...... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 15084120 NA +3934 chr4 + 190214555 42175958 42175957 42176032 75 GTGCACCTGTGGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAAGGTCGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC-AGAAGCTTTGGGCTGTAG ......x...:..............::........x.xx.x...x..........:-:....x.:x:.....:.. 56M1D18M 58/74 78.4% 74/94230402 0.0% 1/74 1.4% -33857246 -60373156 +3115 chr4 + 190214555 42193586 42193585 42193665 80 CCTCTCTTTCTCTCTCCTTATCTCTCCTTCCTTCCTCCTTTTTTCCCTTCTTCCTTTGCATTTCTTCTGCCTCCTCCTTT chr4 + 94230402 63998160 63998159 63998239 63998160 63998159 63998239 80 CTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTT .:.:..:..::....:.x....:..........x..x:::..:...:.xx.......x...:.:.:x:x.:.::x..:.. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% -21804574 -72425828 +3683 chr4 + 190214555 42195036 42195035 42195202 167 AAGAGGCAGATTCTGGA-GTCAGAC-------TGCCTGGTTTCAATCCCCAGCTTCATGACTTACTTTCTGTATGATGGGCAATTTACATATCCTCTGTGTGCCTCAACTTCCTCATTTGTAAAATGGGACAGA-AGTTGGCATGTATCTCATAAGATTA-TATGAGAATTAATTGA chr4 + 94230402 83501090 83501089 83501246 83501090 83501089 83501246 157 AAGAAACAGAAGATGGGTGTCACACACCCACATACCTGGATTCTGTACCCAGACTC--------------------TGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAA ....::....xxx...:-....x..-------.:.....x...x:.x.....x:..--------------------.......x....x..x...x.:.........::..:.:..::..........::.x..-...x:x:.:x..:....:.:.:x..-.:....:x.x...::. 17M1I7M7I24M20D58M1I25M1I16M 102/147 69.4% 157/94230402 0.0% 30/147 20.4% -41306054 -52924348 +3077 chr4 + 190214555 42215424 42215423 42215527 104 AAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAGAAAAAGAAAAAGTTAAAAAAAAAAAAGATTTGTACCCTTCTAAAAAAA-------CCTTTAAAAATCATATTGGATAAA chr4 + 94230402 34284101 34284100 34284211 34284101 34284100 34284211 111 AAAAAAAAAAAAAAAAAGAAGAGGAAGAAATCACAGAATCAAGGTTAGAAGAGATCAAGATCACATCCATTCCAACCAAAATATTTTTCTGTAAAGAAAATTCCAGATAGA ....................:..:..:...xx.x.:.:xx..:....:..:.:.xx.....:xxxx..x...:..xx...-------:..x....:.xx..x:::....:. 80M7I24M 69/104 66.3% 111/94230402 0.0% 7/104 6.7% 7931323 NA +3573 chr4 + 190214555 42215850 42215849 42215916 67 AGTGGCGCATGCGTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:...--......:.:...........::........x.xx:x...x.:.........:.:.. 9M2D56M 51/65 78.5% 65/94230402 0.0% 2/65 3.1% -33817350 -60413052 +3062 chr4 + 190214555 42219466 42219465 42219519 54 TACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACC chr4 + 94230402 76033205 76033204 76033258 76033205 76033204 76033258 54 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC .:..:x....:.:...........::........x.x..x...x::........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -33813739 -60416663 +3045 chr4 + 190214555 42223377 42223376 42223455 79 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACGTGGGAGGGGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:...........::........x.xx.x...x::.......x::.:..xxxx:..:..:.. 6M2D71M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -33809824 -60420578 +3191 chr4 + 190214555 42229268 42229267 42229326 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATAGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -33803938 -60426464 +3080 chr4 + 190214555 42229953 42229952 42230023 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAACCCGGGAAGCACAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x:xx.x.:.x.x.........:.:.:x:x::..:..:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -33803254 -60427148 +3178 chr4 + 190214555 42230468 42230467 42230538 71 CGTGGTGGCACATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAAAAGAATCACTTGAACCTGGGAGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:::....::..:.--....:.:.......:...::........x.xx:x...x..........::.:... 14M2D55M 49/69 71.0% 69/94230402 0.0% 2/69 2.9% -33802729 -60427673 +3569 chr4 + 190214555 42234762 42234761 42234840 79 GTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATAGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--....:.:...........::........x.x::x...xx:...........:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -33798439 -60431963 +3007 chr4 + 190214555 42240094 42240093 42240152 59 TGTGTGTGTGTAAATGTGCATATGTGTGTGTTGGTATACATGTGTATAACTGTGTAACT chr4 + 94230402 40388219 40388218 40388277 40388219 40388218 40388277 59 TGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACT .....:.....xx..x.:...:.:..::.:.xx.:.....x:...:............. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 1851875 NA +3314 chr4 + 190214555 42244975 42244974 42245057 83 CGTGGTGGCGCACACCTGTAGTTCTAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:....:--........:.......::::........x.xx:x...x::...........:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -33788222 -60442180 +3156 chr4 + 190214555 42246974 42246973 42247045 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGTGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.:.........x.:x.x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -33786232 -60444170 +3314 chr4 + 190214555 42265502 42265501 42265578 77 CACATTTAAAGCTGTCCTGGGCTGTAGGCAGCCCATGGGCTGTGGGTTGGATAAGCTTGTTCTATTTTTTTTTTTTT chr4 + 94230402 83270673 83270672 83270749 83270673 83270672 83270749 77 CGCACTGTGAGCTGTGCCAGGTTGCATGCAGCCTGTGGACTGTGAGTTAGACATGCTTGGTCTGGTGTATCTGTTTT .:..:.xx:......x.::..:..:.x......::...:.....:...:..:.x.....x...:x.x.x.:.x.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -41005171 -53225231 +4003 chr4 + 190214555 42277830 42277829 42277953 124 TTATTCATCTACCTCACACAGATGTTGGACAGATTGATTAGTTAGTGTTCAAAAATTGCTTGGAGGATGAAAAGTGCTGATTATTATTATTATGTTGTCTAAGAGAAA---TTCCCTGCCTTTGAAA chr4 + 94230402 69811569 69811568 69811690 69811569 69811568 69811690 122 TCACTCATCTGCTTCACAAGAGTGTTGTAAAGATTAATTAGTTAGTGTTTAGAAAGTACTTCATAAAATTAAAGTATTAAGCTTTATTAAGACA-----TAAAAGAAAACTTTCTACCCCTTTGAAA .:.:......:.:.....x:::.....x.x.....:.............:.:...x.:...x:x::.xxx.....::.:.x:x......xx.::-----...:.....---...:x:x......... 94M5D9M3I16M 81/119 68.1% 122/94230402 0.0% 8/119 6.7% -27533739 -66696663 +3380 chr4 + 190214555 42299697 42299696 42299770 74 GTGCACTTGTGGTCCCAGCTACTTGGGAGGCTAAGGTGGCAGAATCGCTTCAACCTGGGGACTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:...........::.....:..x:xxxx...x.:...x....::.:::...x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -33733507 -60496895 +3094 chr4 + 190214555 42300007 42300006 42300069 63 CCCTCCCTTCCTTCCTTCCTTCCTCCCCTCCCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 25163657 25163656 25163717 25163657 25163656 25163717 61 CCCACCCCCGCTCCCTT--TTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCC ...x...::x..:....--...:....x...x..:.............:..:...::...::. 17M2D44M 46/61 75.4% 61/94230402 0.0% 2/61 3.3% 17136350 NA +3079 chr4 + 190214555 42300011 42300010 42300094 84 CCCTTCCTTCCTTCCTTCCTCCCCTCCCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::..:...:::.:x.:...x:.....:...::....xx:.x..x.:.........:...:x...x.....x..xx..x.:.:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -15072015 -79158387 +3166 chr4 + 190214555 42300077 42300076 42300154 78 CTTTCTTTTTCTTTCTTTTCTCCTTCCCTCCCTCCCTCCCTTCCTTCCTTTCTTCCTCCCCTCCCTCCTCTTTCTTTC chr4 + 94230402 1939443 1939442 1939518 1939443 1939442 1939518 76 CTTTCTTTTTCC--CTTTTAACCTTGCTTTCCTACAGCACGTCCTTCCTTTCATCCTTCCCTTTGTTCTCCTCCCATC ...........:--.....xx....x.:.:...x.xx.x.x...........x....:....::x.:...:.:.:x.. 12M2D64M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 40360634 NA +3394 chr4 + 190214555 42300080 42300079 42300138 59 TCTTTTTCTTTCTTTTCTCCTTCCCTCCCTCCCTCCCTTCCTTCCTTTCTTC-CTCCCCT chr4 + 94230402 7218318 7218317 7218377 7218318 7218317 7218377 60 TTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT .:.....:........x.....:..:.......:...:....:..:::x...-..:.... 52M1I7M 46/59 78.0% 60/94230402 0.0% 1/59 1.7% 35081762 NA +3034 chr4 + 190214555 42300135 42300134 42300174 40 CCCTCCCTCCTCTTTCTTTCTCCCTCTTTCTTTCTTTCTT chr4 + 94230402 38525370 38525369 38525409 38525370 38525369 38525409 40 CCCTCCCTCTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTT .........:.....:.:.........:.....:...:.. 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% 3774765 NA +4324 chr4 + 190214555 42326687 42326686 42326831 145 GGGAAGGAAGGAGGGATGGAAGGAAG---------GATGAATGAAGGAAGGAAGAAAGGGAAAGGGAAAGAA-----AGGGAAAGAAAGAAAGGAAAGAAGAAAGGAAGGAAGAAAGAAAGAAAAAGAGAAAGAAAGAAA--------------GAAACAAAGAAAGAAGAAA chr4 + 94230402 32265490 32265489 32265662 32265490 32265489 32265662 173 GGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA ...:.x.x...::.x.....::.:..---------.:x.x:...:..::...:xxx:.....:.:...x.x.-----..x.:...:......:..:..:...:::..:...:.:.....:.....x:.x.:.....x.::--------------......:.....:.:..:. 26M9I37M5I63M14I19M 96/145 66.2% 173/94230402 0.0% 28/145 19.3% 10061197 NA +3003 chr4 + 190214555 42326733 42326732 42326803 71 AAGGGAAAGGGAAAGAAAGGGAAAGAAAGAAAGGAAAGAAGAAAGGAAGGAAGAAAGAAAGAAAAAGAGAA chr4 + 94230402 58935744 58935743 58935814 58935744 58935743 58935814 71 AAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ....:...:x...::::.:.....:x.......x....:.::...:..x:.x.x...::.:...:..::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -16609011 -77621391 +3067 chr4 + 190214555 42333565 42333564 42333633 69 TTCATTATTTCATATATTTCTTAAAAAGTAGCCAACTGTATACCCATTTTATAGGAGAGAGTACATTGG chr4 + 94230402 64753371 64753370 64753439 64753371 64753370 64753439 69 TTCATCATTCTCGGAAGTTCTTAAAGAGGGGCCAACTGAATATCCATCTCATGGAAAACTGTACAGTGG .....:...::xx:x.x........:..x:........x...:....:.:..:.:.:.xx.....x... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -22419806 -71810596 +3591 chr4 + 190214555 42341544 42341543 42341665 122 GGTGACA--------GAGCCAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAAATAAAGAAAAAAAAGGTTCATTAATAGGCTGAAAGGGAGGTAGTGTATGGAGGACA---TTCCATACTTTCACAAG chr4 + 94230402 49908270 49908269 49908402 49908270 49908269 49908402 133 GGTGACATTTAAAAGAAACCAGCTACCAGCTAAATGTAAAGGGGAAAAAAGAAAGAAATAAAGAAGAAAAGGATAAATAAATGAGGTAAAATGAAGGTTAAATTAGGAGGAAAGGTTACTGTTTCTTCACAGG .......--------:.:....x:x...x..x..x:x...::::......:..............:....:.:.xx..x...::.x.:...x.:....x:x:.xx......x.---.x.::.x::......:. 7M8I98M3I17M 81/122 66.4% 133/94230402 0.0% 11/122 9.0% -7566726 -86663676 +3250 chr4 + 190214555 42357152 42357151 42357202 51 AGAAAGAAGAAAGAGAGAGAGAGAAAGGAAGGAAGGAAAAGAAAAGAAAGA chr4 + 94230402 2605165 2605164 2605215 2605165 2605164 2605215 51 AGAAAGGAAAAAGTGAGATGGAGAGAGGGGGGAGGGAAAAAAAAAGAAAAA ......:.:....x....x:....:...::...:......:........:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 39751987 NA +3358 chr4 + 190214555 42357258 42357257 42357430 173 GAGAGGGGGAGGGAGGGAGGCGGGCAGGGAAGGAAAGGGAAGGGGAGGGAGGGG-AGAAGAAGGGAGAGGAGGGGAAGGAGAGGAGAAAGGAAGAAAGGAA-----------AGAAGAAAGAAAGGAAGGAAGGGAAAGAAAGAAGAAAGAAATGAAAGAGAGAGAGAGGGAGGGATGGGGAGAG chr4 + 94230402 1688843 1688842 1689022 1688843 1688842 1689022 180 GATGGGGGCTGGAAATAAAGCAGGCGGTGATTTACGGAGAGGGGGAGGGCTGCTCATAAATCAGGTAATGTTTGGGAGGAGGTGAGGTGGGAACGCAGAGATTTCTGTTTCCCGATGCAAAGCCGG--GAAAGGAAAATAAAGAAGAAAGAAATGAAAGGGGAAGAGCTGGTGGGA---GGAGAG ..x:....xx..:.:x:.:..:...:.x..xxx.x:.:..:........xx.xx-.x..:xx:..x:.x.xxx..:.....:x...:x:....x:x..::.-----------x..x.x..::xx..--.:....:...x....................:.::....xx..x....---...... 54M1I46M11I14M2D48M3D6M 107/168 63.7% 180/94230402 0.0% 17/168 10.1% 40668415 NA +3520 chr4 + 190214555 42357280 42357279 42357397 118 GGCAGGGAAGGAAAGGGAAGGGGAGGGAGGGGAGAAGAAGGGAGAGGAGGGGAAGGAGAGGAGAAAGGAAGAAAGGAAAGAAGAAAGAAAGGAAGGAAGGGAAAGAAAGAAGAAAGAA chr4 + 94230402 12647117 12647116 12647232 12647117 12647116 12647232 116 GGAAGGTAATGAATGCAAGGGGGGGGGAAGAGGGAAAA--TTAATGGGAAGAAATTAAAGGAGAAAATAAAAATGGGAAAATAGGACAAGGTTGTGAGGGGAAAAAAAAAAAAGAGAA ..x...x..x...x.x:.:....:....:.:.:...:.--xx.:x..:::.:..xx.:........:x..:..x..:..:.x:::.x..:.xx:x..:......:...:..:.:.... 38M2D78M 72/116 62.1% 116/94230402 0.0% 2/116 1.7% 29710163 NA +3197 chr4 + 190214555 42357304 42357303 42357392 89 GGGAGGGGAGAAGAAGGGAGAGGAGGGGAAGGAGAGGAGAAAGG-----AAGAAAGGAAAGAAGAAAGAAAGGAAGGAAGGGAAAGAAAGAAGA chr4 + 94230402 58935721 58935720 58935814 58935721 58935720 58935814 94 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ..:.x.:..::.:..x:.x..xx.:..:..::x..:...:....-----.......x....:.::......x:.x.x........:.:..:.:. 44M5I45M 59/89 66.3% 94/94230402 0.0% 5/89 5.6% -16578417 -77651985 +5373 chr4 + 190214555 42357308 42357307 42357460 153 GGGGAGAAGAAGGGAGAGGAGGGGAAGGAG--------AGGAGAAAGGAAGAAAGGAAAGAAGAAAGAAAGG-----------------AAGGAAGGGAAA--GAAAGAAGAAAGAAATGAAA--GAGAGAGAGAGGGAGGGATGGGGAGAGAGAGAGAAGAAGGAAGGAAGGAAGGACGGA chr4 + 94230402 1500700 1500699 1500881 1500700 1500699 1500881 182 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatgga .....::.....::..:x.:.......:..--------.....:..::..:x.:.:....:.....x.::..-----------------........:...--....:..:.......x:...--..:.x...:::...:::.x....:.:.:::....:.....::::..:::.::.:... 30M8I34M17I12M2I20M2I57M 104/153 68.0% 182/94230402 0.0% 29/153 19.0% 40856608 NA +3099 chr4 + 190214555 42357334 42357333 42357377 44 GGAGAGGAGAAAGGAAGAAAGGAAAGAAGAAAGAAAGGAAGGAA chr4 + 94230402 27884199 27884198 27884242 27884199 27884198 27884242 44 GGAGAGAAGAAAGGAAGAAAGGGAACAAGAAGAAACAGAAGGAA ......:...............:..x.....::..x:....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 14473135 NA +3557 chr4 + 190214555 42364753 42364752 42364946 194 TCTTTCTTTCTTTCCCCTTCCTTCCTCTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCTTCCT---TCCTTTCTCTTTCTTTCTCTTTTTCTTTCTTTTCTTTCTCCTCCTTCCTTCCTCTTTCTCTTTCTTTCTTTTTCTTTTTTCCTTCCTTCCTTCCTCTTTCTCTTTCCCTCCCTCTCTCTCTCTCTT chr4 + 94230402 33237583 33237582 33237759 33237583 33237582 33237759 177 TTTATCCGTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCT-----------TCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCT---------GCTTTGTCTCTCTT .:.x..:x...:...::.:..:x..::x.:.x...:xx.....xx.:..x...:...:x.:...:x..---.x.x.x..xxx.:..:::....x.....xx.:.x..::..:x....x:.....-----------.:x.......x:..::.:.:....:.:.x:....x:...---------x..:.x........ 68M3I53M11D39M9D14M 108/174 62.1% 177/94230402 0.0% 23/174 13.2% 9127170 NA +3352 chr4 + 190214555 42364775 42364774 42364902 128 TCCTCTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCTTCCTTCCTTTCTCTTTCTTTCTCTTTTTCTTTCTTTTCTTTCTCCTCCTTCCTTCCTCTTTCTCTTTCTTTCTTTTTCTTTTTTCC chr4 + 94230402 68974688 68974687 68974810 68974688 68974687 68974810 123 TCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCATCT-----GTTCTAATTTTTGCAGCTTCTTTTGCCC ..:.:...x.....:xx.:.::...:...:...:......x.x.......:.x.::xx:.....:x.x.x:.:.x:....::.x..:...:x:..-----x....xx..:..x.xx:.......x:.. 95M5D28M 77/123 62.6% 123/94230402 0.0% 5/123 4.1% -26609913 -67620489 +3082 chr4 + 190214555 42364858 42364857 42364911 54 CTCCTCCTTCCTTCCTCTTTCTCTTTCTTTCTTTTTCTTTTTTCCTTCCTTCCT chr4 + 94230402 70062264 70062263 70062317 70062264 70062263 70062317 54 CCCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTT .:.:...:.x......x:......:x....:.....:..........x:...:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -27697406 -66532996 +3069 chr4 + 190214555 42364883 42364882 42364940 58 TCTTTCTTTTTCTTTTTTCCTTCCTTCCTTCCTCTTTCTCTTTCCCTCCCTCTCTCTC chr4 + 94230402 7218318 7218317 7218375 7218318 7218317 7218375 58 TTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCC .:...:..........x.....:.::..:...:.:::...:.:...:.x:.....::. 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% 35146565 NA +3355 chr4 + 190214555 42383778 42383777 42383936 159 TGGGATTACAGGCATGAGCCACTGCGCCCAGCCTATTTTCTTTTCC--------CTCTGTCCTTTTT---TCTTTTCTCTTCTCTTC-------------TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---------TTTCTTTCTTTCT---TTCTTTCTTTCTTCTTTCTTTCTCTCT chr4 + 94230402 64726391 64726390 64726585 64726391 64726390 64726585 195 TGGGGCTTAAGACAAGAGTATAGACATGCAGCCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ....::.xx..:..x...:xxxx:.::x.......:x.....:.:.--------.....xx:...:.---.....x....x:..:..-------------:......x::.x..x.:x:..x:x...:x.:.:....:....:---------...:..:......---........:.:...:...::...:.:. 46M8I13M3I17M13I43M9I13M3I27M 105/159 66.0% 195/94230402 0.0% 36/159 22.6% -22342613 -71887789 +3021 chr4 + 190214555 42383814 42383813 42383893 80 TTTCTTTTCCCTCTGTCCTTTTTTCTTTTCTCTTCTCTTCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 27089062 27089061 27089141 27089062 27089061 27089141 80 TTTTTTATTCCTCTGTTCTGCTCTCTTTTTTCTTTACTGCTGGTACTTTTTTCCCCAGTCCTTTTTCTTCTTAGCTTTCT ...:..x.:.......:..x:.:......:....:x..x..xx.x....:..::.:xx:::.:......::.xx...... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 15294752 NA +3673 chr4 + 190214555 42383833 42383832 42383995 163 TTTTTCTTTTCTCTTCTCTTCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCT-------CTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTTTCTTTCTCTT chr4 + 94230402 50176266 50176265 50176426 50176266 50176265 50176426 161 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTT------GTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT---TCTTTCTCCTCCATTCTTCACATATCCCTT ....::x.:..x..x....:..:.:.:::.:.x.:.x::.x:.:..x.x..x..::..::x......------x.x..:x...:.x..............-------.:x:...:.:x.:.:::.x....:......---...:....:::.x.....:x:x.x..:... 67M6D27M7I30M3D30M 96/154 62.3% 161/94230402 0.0% 16/154 10.4% -7792433 -86437969 +3521 chr4 + 190214555 42383833 42383832 42383913 81 TTTTTCTTTTCTCTTCTCT--TCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ............:x..:..--:...:....::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 19M2I62M 59/81 72.8% 83/94230402 0.0% 2/81 2.5% -14988194 -79242208 +3735 chr4 + 190214555 42383856 42383855 42384000 145 TTTCTTTCTTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCT-------------------CTCTCTCTTTCTTTT-------TCTTTCTCTTTTCTG chr4 + 94230402 49829809 49829808 49829985 49829809 49829808 49829985 177 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGGGCACAAAAACGATCCTCCCTTTCATTTCAGTGCATTTTTCCATTTTCTG .....:...xx.:.....xx:-----..:.x..:.:.x.xx...x:...:x::.-...........:...........:.......:.:.:.:...:...x.x.x.x:x....x.:.:.:x-------------------::...:.....x...-------.:....:x....... 21M5I28M1I66M19I15M7I15M 100/145 69.0% 177/94230402 0.0% 32/145 22.1% -7445953 -86784449 +3155 chr4 + 190214555 42385428 42385427 42385510 83 CATGGTGGCGAGCACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGATAATTGCTTGAGCCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:........:..::........x.xx.xx..x::.....:...:.:..x:xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -33647769 -60582633 +3003 chr4 + 190214555 42419994 42419993 42420037 44 CTCCGTCTCAAAAAAAAACAAACAAACAAAAAAAAAAAACTGCT chr4 + 94230402 42933547 42933546 42933590 42933547 42933546 42933590 44 CTATGTTTAAAAAAAAAACAAACAAACAAACAAAAAAAACTTCT ..x:..:.x.....................x..........x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -513553 -93716849 +3138 chr4 + 190214555 42461218 42461217 42461288 71 ATAAAATATACTGAGATCAATTTTTTCTTTCTTTTTTTTTTTTTTGCTTTTTGCTAATGTGGCTTGCATTG chr4 + 94230402 80714972 80714971 80715042 80714972 80714971 80715042 71 ATACAATATAATCTAACCTATTTTTCCTTTTTTTTTTTTCCTCCTTTCTCTTGCTAATGTAATTAGCAATG ...x......x.xx:.:.x......:....:........::.::.x::.:..........:::.x...x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -38253754 -55976648 +4547 chr4 + 190214555 42464922 42464921 42465003 82 CTGCCTGCAGGCCTTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCATTTGCTCCATCACC chr4 + 94230402 68657673 68657672 68657754 68657673 68657672 68657754 82 CTACCTGCATGCCTTCTTGGCCCATGATTCCCACACCAGTGTCAGCTACCTGGATCATACTGACATCATTGGCACCATCACC ..:......x......x.x...xx....x..x......::..xx...::...x.....:...........x..x........ 82M 64/82 78.0% 82/94230402 0.0% 0/82 0.0% -26192751 -68037651 +3484 chr4 + 190214555 42500229 42500228 42500294 66 GTGGTGAATGCCTGTGATCCCAGCTACTCGGGAGGCTGAGTCAGGAGAATCGCTTGAACCCAGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x.:.--...::.:.........:.::........:.xx.x...x.:.............. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -33532972 -60697430 +3577 chr4 + 190214555 42507727 42507726 42507811 85 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAGTCAGTTAAAAAGGACAGGCATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA chr4 + 94230402 29756605 29756604 29756689 29756605 29756604 29756689 85 CTCAGATTGAAAAAAGAAAAAAAAAAGAGAACTGTAATAATAGCCACATTCTTTCAAAAACTAAAAAAAAAAAAAGAAAAAAACA ....:.xx:......:..........:.::x.x..x.x..x:.x..x::x:.:.x.....xx.............:......... 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% 12751122 NA +3109 chr4 + 190214555 42509712 42509711 42509780 69 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::....:--....x......:.........:.::........x.xx.x...xx:.x.........:. 9M2D58M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% -33523485 -60706917 +3147 chr4 + 190214555 42509847 42509846 42509911 65 CTCAAAAAAAAAAAAAAAAAAAAAAAAGTTATTGTTTCTTTTAAGCTTTCCTTTATTTCTTAAAA chr4 + 94230402 42687161 42687160 42687225 42687161 42687160 42687225 65 CTTAAAGCAAAAAAAAAAAAAAAAAGAGTTTAAACTTTATTTAAACTCTCACTCATTTCTGAGAA ..:...:x.................:....xxx::..:x.....:..:..x:.:......x.:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -177314 -94053088 +3089 chr4 + 190214555 42516592 42516591 42516650 59 AGACATAATTGTATTTTTCTATTGAAGCAAATAAATATTAAACATTTTCAAAAAATTAT chr4 + 94230402 77817102 77817101 77817160 77817102 77817101 77817160 59 AGAAATGATTATATTCTACTAATGAATCAAATTAATTGTAAACATTTTTAAGAAGTCAT ...x..:...:....:.x...x....x.....x...xx..........:..:..:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -35300510 -58929892 +3562 chr4 + 190214555 42532362 42532361 42532428 67 TGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGTAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.........::::........x.xx.x...x.:..............x.xx:..:..... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -33500849 -60729553 +3951 chr4 + 190214555 42536992 42536991 42537074 83 CATGGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--....:.:...........::........x.xx.x...x::...........:..x.xx:..:..::. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -33496205 -60734197 +3510 chr4 + 190214555 42563955 42563954 42564024 70 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCAAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:.--....:.:...........::........x.xx.x...x..........x..:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -33469242 -60761160 +3118 chr4 + 190214555 42576453 42576452 42576511 59 GCGACAGAGCAAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGCA chr4 + 94230402 88382708 88382707 88382766 88382708 88382707 88382766 59 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACA ..:.x:.........:x.x.........::.:..............:x.x.:...x:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -45806255 -48424147 +3474 chr4 + 190214555 42635685 42635684 42635754 70 TGTATTTGTATATATTGTTTTGATACAGAAGCTTAAGAATATATACATACACACATATATACATATATAT chr4 + 94230402 13482044 13482043 13482105 13482044 13482043 13482105 62 TGCATGTATATATATTTT--------AAAAGCTTAAAAATATATATATGCACACCCATACACATATATAT ..:..x.:........x.--------.:........:........:..:.....x:...:.......... 18M8D44M 51/62 82.3% 62/94230402 0.0% 8/62 12.9% 29153641 NA +3596 chr4 + 190214555 42635724 42635723 42635800 77 TATATACATACACACATATATACATATATATACACACACACACACACACACACACA---CACATATATATATATATATAT chr4 + 94230402 23247727 23247726 23247806 23247727 23247726 23247806 80 TGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:...:..:.....:x...:x......:..:.....:...........x:x.x.x.---:....:x...x.......... 56M3I21M 58/77 75.3% 80/94230402 0.0% 3/77 3.9% 19387997 NA +3662 chr4 + 190214555 42635724 42635723 42635806 83 TATATACATACACACATATATACATATATATACACACACACACACACACACACACACACATATATATATATATATATATATAT chr4 + 94230402 23247725 23247724 23247806 23247725 23247724 23247806 82 TGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-TACATGAATAAATATATATAT .:.:..:::........x...:x.:....:........:...........x:x.x.x.x:.-..:..:x...x.......... 61M1D21M 60/82 73.2% 82/94230402 0.0% 1/82 1.2% 19387999 NA +3716 chr4 + 190214555 42635764 42635763 42635834 71 CACACACACACACACACACATATATATATATATATATATATATATATACACATGTATGTATGTATGTAAGC chr4 + 94230402 33416724 33416723 33416793 33416724 33416723 33416793 70 CATGGATACACACAGACAC-TGGATATACATATATATATATCTGTATACACATGTCTGCACGTATGTGCGC ..::x.:.......x....-.:x.....:............x.:...........x..:.:......:x.. 19M1D51M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% 9219040 NA +3369 chr4 + 190214555 42665546 42665545 42665688 143 CATGGTGGTATGCACCTACAGTCCCAACTACTTGGGAAGTTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG----TGA-GCCA---AGAT-TGTGCCAT-----TGCACTCCAGCCTGGCGACAGAGTGAGACTCTGTGTCAAAA chr4 + 94230402 76033197 76033196 76033350 76033197 76033196 76033350 154 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAA ..::.....--....x.::...:...:.......::.:.:....x.xx.x...x.:...........:..x:xx:..:..:..----...-....---....-......x.-----...x.-.....x...:...x.x:x::::..:x.x....x.. 9M2D72M4I3M1I4M3I4M1I8M5I5M1D35M 99/140 70.7% 154/94230402 0.0% 17/140 12.1% -33367651 -60862751 +3113 chr4 + 190214555 42687318 42687317 42687405 88 ACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTGTACTAAAATACAAAAGAAAAAAAAAAAAGAAAAGGA chr4 + 94230402 93542374 93542373 93542461 93542374 93542373 93542461 88 ACGAGGTCTGCAGAACAGGAGAACTCTGGACAAAATGAATAAACTCTTTGTTCTACAAACTAAAAGGGGAAAAAAAAAAAAAAAAAGA ........x.x...x.::..xx.::....x...x...:xx....:.:x.x.x:xx:...x..x..::.:...........:....:.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -50855056 -43375346 +3322 chr4 + 190214555 42687441 42687440 42687495 55 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCGGGAGC chr4 + 94230402 76033211 76033210 76033265 76033211 76033210 76033265 55 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ......:...........::........x.xx.x...x.:.......:.:.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -33345770 -60884632 +3236 chr4 + 190214555 42711142 42711141 42711192 51 TATGTAATTCAGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTT chr4 + 94230402 23572644 23572643 23572694 23572644 23572643 23572694 51 TATATAATTTAACCTTCTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTT ...:.....:.:x:..:.x.x....................x......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 19138498 NA +3340 chr4 + 190214555 42711149 42711148 42711202 54 TTCAGGTTTTT---TTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 25576006 25576005 25576062 25576006 25576005 25576062 57 TTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAA ...x.......---.............x...x.....x....x.....:........ 11M3I43M 48/54 88.9% 57/94230402 0.0% 3/54 5.6% 17135143 NA +3412 chr4 + 190214555 42711153 42711152 42711197 45 GGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 28946009 28946008 28946053 28946009 28946008 28946053 45 GGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTT ..x.....................x.x:................. 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 13765144 NA +3847 chr4 + 190214555 42760181 42760180 42760254 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAACCCAGGAGGTTGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x:xx.x.:.x.:...........:..x..x:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -33273023 -60957379 +3297 chr4 + 190214555 42762967 42762966 42763030 64 AATACATAATACAACATATATATGTATATATATACACATATATATGTATATGTGTATATATACA chr4 + 94230402 80774362 80774361 80774425 80774362 80774361 80774425 64 AATCCAAATAACAACACGTATGTGCATAAAAGCACACGTATGTATGTATATGTGTATGCATGCA ...x..x.xx......::...:..:...x.x::....:...:...............::..:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -38011395 -56219007 +3097 chr4 + 190214555 42763008 42763007 42763075 68 ATATGTATATGTGTATATATACACATATATATGTATATGTGTATATATACACATATATGTATATACTT chr4 + 94230402 80774375 80774374 80774442 80774375 80774374 80774442 68 ACACGTATGTGCATAAAAGCACACGTATGTATGTATATGTGTATGCATGCAACTGTCTGGACATAGTT .:.:....:..::..x.x::....:...:...............::..:..xx.:.x..x.:...x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -38011367 -56219035 +3134 chr4 + 190214555 42773756 42773755 42773822 67 ATATATATATATATATACACACACACACATATCCATATATATACGTATATATGGCTATATGTGTATA chr4 + 94230402 89823933 89823932 89823999 89823933 89823932 89823999 67 ATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTA ......:x...:.:.:............x...xxx.............x:xx:.:......:x.x.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -47050177 -47180225 +3448 chr4 + 190214555 42773823 42773822 42773937 115 TATACATATATAGTGTGTATATATACGTATATACACACACGCGTATATATACATGCGTGTGTATATACGTATATACACA--CATATGTGTGTGTGTATATGTATATACACACGTATG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGT---GTGTCTCTGTGGGCGTATTTATATGTACTCACATATAC----TCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .......:.---....x.x.:.:x:.....x..:.:::..x.::.....:----x.....::x.........:...x..--.x.x.....:.:...:....x....:..::.::.:. 9M3D38M4D25M2I36M 74/108 68.5% 110/94230402 0.0% 9/108 8.3% 21664629 NA +3054 chr4 + 190214555 42773931 42773930 42773978 48 ACGTATGTATGTGTATATATGTATATGTATACATATATACCATTTCAT chr4 + 94230402 65759999 65759998 65760046 65759999 65759998 65760046 48 ATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAAT .:......:....:...:....x.:...........:...:.:..x.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -22986068 -71244334 +3024 chr4 + 190214555 42774430 42774429 42774475 46 ATGGTGTGTGTGTGTGTATATATATATATATATATATGTATACATA chr4 + 94230402 24295788 24295787 24295833 24295788 24295787 24295833 46 ACAGTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACA .::....................:......xx..x...:.....:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 18478642 NA +3617 chr4 + 190214555 42783777 42783776 42783864 88 ATGTATGTATGTATGTATGTATATATATATATATACACACACACACACGCACAGAGACACACACACACACACACACACATATATATGA chr4 + 94230402 23247722 23247721 23247808 23247722 23247721 23247808 87 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA-AAAAAGTTACATGAATAAATATATATATGA ....:......:.:::.::.x...:x.:....:........:......:....::..-.x.x.xx:...::x.:.x.:.......... 57M1D30M 60/87 69.0% 87/94230402 0.0% 1/87 1.1% 19536055 NA +3102 chr4 + 190214555 42825675 42825674 42825757 83 ATTTTATAGTTGTGGAAACTGAGGCACAGAGAAACTAGCTACTTTGCCCAAGACCACACACTTGGCAATTGGTAGAGTTTGGA chr4 + 94230402 83846002 83846001 83846082 83846002 83846001 83846082 81 ATTCTACAGCTGTACAAACTGAAGCTCAAAGAAACTAAGCGTCTTGCCCAAGGT--CATATTGAGCTGGTGGTTGAGCCAGGA ...:..:..:...:x.......:..x..:........:x::::.........::--..:.:.x:..x:x....x...::x... 54M2D27M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -41020327 -53210075 +3048 chr4 + 190214555 42846724 42846723 42846798 75 CCAGCTTTTTGAGGGAGGAAAAAGAGAGAAAAATGCTATTTATTTAACAAACAAATAAATAAAATGATAGAATCA chr4 + 94230402 31986477 31986476 31986551 31986477 31986476 31986551 75 CCAGCTTTTCAATAGAGAAAAGAATGTGATGAATTAGAAATAGTAAATAAATAAGTAAATAGAATCATAGAATCA .........::.x:...:...:.:x.x..x:...xxx.xx..x.x..:...:..:......:...x......... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 10860247 NA +3314 chr4 + 190214555 42861231 42861230 42861313 83 CATGGTGGCACATGTCTGTAATCTCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:..--...:.::..........::.:......x.xx.x...x.:.........:.:..x:xx:..:..:.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -33171966 -61058436 +3173 chr4 + 190214555 42864384 42864383 42864444 61 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTTGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:...........::........x.xx.x..:x::........::.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -33168820 -61061582 +3153 chr4 + 190214555 42932544 42932543 42932631 88 ACTCTCTTTGAGTGTTTCTCTTAAACTCCCTTCCATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005959 27005958 27006038 27005959 27005958 27006038 80 ACTCTATTTGGCTGCCTTTTTTG---TCACTT-----TATTAGGCTATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG .....x....:x..::.:.:..:---..x...-----...xx:xx...........x.......x.....:...x.:........... 23M3D6M5D51M 61/80 76.2% 80/94230402 0.0% 8/80 10.0% 15926585 NA +3279 chr4 + 190214555 42981089 42981088 42981166 78 TCTTTTCTCTCTTTCTTTTCCTTCTGCTGTCTTCCTTTGTAGCTTAATGATTTTCTGTAGTGGTATTTTTTTTTTTTT chr4 + 94230402 41754633 41754632 41754710 41754633 41754632 41754710 78 TCTTTTCTCCATTTCTTTTCTTTTTTCTTTCCCATTTTATCACTTCCTAATATCCTCCAATATTATTTTTTTCCTTTT .........:x.........:..:.x..x..::x:...:.x:...xx.:..x.:..x:.:.:x.........::.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 1226456 NA +3096 chr4 + 190214555 42983771 42983770 42983873 103 TTTTTCTTTTTTCT--CCTCTAAGTGTATATTTTCAAGTAACCTGTCTTTATGTTCAGAGATTTTCTTTCTTTTTTTTTTTTTTTCAGACAGAGTCTCACTCTGT chr4 + 94230402 65970983 65970982 65971085 65970983 65970982 65971085 103 TTTTACTTTGTTTTGAATCCAAAGTGGATATCCT--AACTGCCAAACTATTTGTCTAGAAATCTTTGTTTTTTTCTTCTTTTTTCTAGACAAACTCTCAATTTGT ....x....x..:.--x::.x.....x....::.--.::x:..x:x..x.x...::...:..:..:x..:....:..:......::.....:.x.....x.:... 14M2I18M2D69M 67/101 66.3% 103/94230402 0.0% 4/101 4.0% -22987212 -71243190 +3449 chr4 + 190214555 42987197 42987196 42987298 102 TTTTCATATATATATTATATATATATTATATATTATATATATATAATATATAATATATATATATAATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 + 94230402 84631387 84631386 84631487 84631387 84631386 84631487 101 TTTTGATTTAGAT-TTATGCATAATTTTCATAATTTAGATGTAGAAAATGCAGGCTTGGTCTATACTATATATATATATAGAGAGAGAGAGAGATACAGTGA ....x..x..x..-....::...xx..x:...x.x..x..:..x..x..::.:xx.xx:.x....x..............x.............x.x..x.. 13M1D88M 72/101 71.3% 101/94230402 0.0% 1/101 1.0% -41644190 -52586212 +3558 chr4 + 190214555 42987224 42987223 42987312 89 ATATATTATATATATATAATATATA---ATATATATATATAATATATATATATATATAGAGAGAGAGAGAGA-GAGAGAGAAAGAGAGAGTCT chr4 + 94230402 22934813 22934812 22934905 22934813 22934812 22934905 93 ATATGCAAGAAATTGATACTATATACATACATATATATATAGTGTGTGTGTGCATATAGAGAGAGAGAGAGATTAAAAAAAAATTGAAAGCCT ....::x.x.x..xx...x......---.:...........:.:.:.:.:.::...................-x.:.:.:...xx..:..:.. 25M3I44M1I20M 65/89 73.0% 93/94230402 0.0% 4/89 4.5% 20052411 NA +3369 chr4 + 190214555 43027979 43027978 43028051 73 TGCACCTGTAATCCCAGCTTCTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:......x....::........x.xx.x...x..........::.:..xxxx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -33005226 -61225176 +3106 chr4 + 190214555 43091378 43091377 43091448 71 AAAAAAAAAAAAAAAAAAAAAAGAAGGAGAATTCTATAGACCTTCTAAATGGTTGTTTAAATTAAAATTAG chr4 + 94230402 56939683 56939682 56939751 56939683 56939682 56939751 69 AAAAAAAAAAAAGAAGAAAAGAGAAAGATGCTTCTATTGACTTGCTAAGTG--TCTTTAAAACAGTAATAG ............:..:....:....:..x:x......x...:.x....:..--.x......x:.:x.x... 51M2D18M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -13848305 -80382097 +3188 chr4 + 190214555 43101676 43101675 43101817 142 TATATAGTTATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT-ATATATATATATAA---CATTTTGGCCAGGCGGGGTGGCTCATGC----CTGTAA--TCTCAGCACTT chr4 + 94230402 79265506 79265505 79265657 79265506 79265505 79265657 152 TATTCAGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTT ...x:...:.xxx:.:...:...:..:.........xx........:...:.::.:.::.:.:::.x.:....x.:.:.x:.:-.:.:x.x.......---..:....x.:xxx:.:.xxx:.xx....----......--x.......... 83M1I14M3I28M4I6M2I11M 91/142 64.1% 152/94230402 0.0% 10/142 7.0% -36163830 -58066572 +3925 chr4 + 190214555 43101683 43101682 43101768 86 TTATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834530 85834529 85834615 85834530 85834529 85834615 86 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x...x:..x.:...x...:...............xx..:..x::...:....:..x...:..:.x...::.:.:...:.:.:.. 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% -42732847 -51497555 +3053 chr4 + 190214555 43101685 43101684 43101751 67 ATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:....::.:......x.::::...x:..:...:.x......:......:xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -2961614 -91268788 +3168 chr4 + 190214555 43101688 43101687 43101762 75 TATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .....:.....:....:...x......::xxx.x..:...:xxx:...:.:...:.......:...x..:.::.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 3164513 NA +3111 chr4 + 190214555 43108172 43108171 43108252 81 GTGTGTGTGTGTGTATATATATATATACATATATACATACATACACATTTTACTGTTTTACTGCATGTAATTCGTGGAGCC chr4 + 94230402 24295791 24295790 24295862 24295791 24295790 24295862 72 GTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACA---------CActggagaactgtgtccagttctgggagcc ....................:......xx..x..:......---------:....xxxx....::.x:.:...xx...... 41M9D31M 55/72 76.4% 72/94230402 0.0% 9/72 12.5% 18812381 NA +3001 chr4 + 190214555 43108984 43108983 43109042 59 ATAGCATTTCAATCCACAAAAAAAAAAAAAGAAAAGAAGGAAAAAAAGGGAAAAAAGAA chr4 + 94230402 55094087 55094086 55094145 55094087 55094086 55094145 59 ATAGCCTTCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAA .....x..:.xx.......::.x.......:.......:....:...x:..xx...:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -11985103 -82245299 +3324 chr4 + 190214555 43137042 43137041 43137145 104 TTCTTTCCTTTCCTTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTGCCTTCCCTTCCCTTTCC chr4 + 94230402 929193 929192 929296 929193 929192 929296 104 TCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCCC .:......x.::..:..:.:.....x.:.:.:.x.x.x.x...x:..x...x.:.x:.x:.....xx.:.x.:.:...:.....:xx.:x::......:.::.. 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% 42207849 NA +3117 chr4 + 190214555 43165166 43165165 43165248 83 CATGGTGGCAGGCGCCTGTAGTCCGAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAGGCAGAGCCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x......:.x.........::........x.xx.x...xx:.x............x:xx:.x...:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -32868031 -61362371 +3274 chr4 + 190214555 43202366 43202365 43202457 92 GTGCACCTGTAGTCCCAGCTATTCAGGAGGCCAAGGCAGGAGAATCGTTTGACCCCAGGAGGTGGAGGTTGCAGTGAACTGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.......:.::::....::..x.xx.x...x.::....x.....:..x.xx:..:..:..------:.x...:..... 74M6D12M 59/86 68.6% 86/94230402 0.0% 6/86 7.0% -32830838 -61399564 +3409 chr4 + 190214555 43239841 43239840 43239922 82 AGGAGGAG----GAGGAGAAGGAAGAGGAAGAAGAAGAGGAAGAGGAAAAGAAAGAGGAAGAGAATAAAGAAGAGGAAGAAGGGGA chr4 + 94230402 82649558 82649557 82649643 82649558 82649557 82649643 86 AGGATGAGCTGTGGGGAGTTGAAGGAGAAAGAAGAAGGGGAAGAGAAAAACAGACTCGATAAGAATGTAGATGAGGATGTAGAGGA ....x...----.:....xx.:.:...:.........:.......:....x.:.xxx..x:.....:x...x.....x.x..:... 8M4I74M 60/82 73.2% 86/94230402 0.0% 4/82 4.9% -39409717 -54820685 +3381 chr4 + 190214555 43323551 43323550 43323622 72 GCACTTATAGTCCCAGCTACTCGGGGAGCTGAGGCACGAGAATCACTTGAACCGAGGAGATGGAGGCTTCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:.........:.::::......x.x:.x...x..........x..:..x.xx:....x:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -32709655 -61520747 +3283 chr4 + 190214555 43343455 43343454 43343565 111 TCCTTTCCTTCATTCCTC-------------CCTCCCTCCTTCCATCCAT--GCCTTCTTCTTTCCTTCCTTCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTT chr4 + 94230402 64726460 64726459 64726585 64726460 64726459 64726585 126 TTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT .:....x..::.......-------------...::..x...x:xx:...--.:x...:x:..::.......::x.xxxx::..:::......:...x........::.....:...:..:..... 18M13I19M2I74M 73/111 65.8% 126/94230402 0.0% 15/111 13.5% -21383005 -72847397 +3108 chr4 + 190214555 43343515 43343514 43343593 79 TTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTT----TCTTTCTTTCTCTCTCCTTTCC chr4 + 94230402 86518998 86518997 86519080 86518998 86518997 86519080 83 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTTCTGAATGCTTTCC ..:....:.....::...x:.:.xx.:...:......:...:.......:.x.....----:..xx:.....xxx.x...... 57M4I22M 56/79 70.9% 83/94230402 0.0% 4/79 5.1% -43175483 -51054919 +3101 chr4 + 190214555 43343540 43343539 43343657 118 TCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTTTCTCTCTTTCTCTTCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTT chr4 + 94230402 63972025 63972024 63972142 63972025 63972024 63972142 118 TTTTACCCTTTTCCTTCTCATTGTTTTCCTCTTCTTTATTTACCCTGTATTTAATTCTTCACATTCAGTTCTCAATGTTTCTCTTTCTCTCTTTTGTTCATTCAATTTTTGTCTCTTT .:..x..:.....:.....x..x...:.:.:......x...x:.::x:x...xx..:.:.x:x..:xx:...:xx.x..::..:...:...::.:x...x...xx.:::.x:...:.. 118M 69/118 58.5% 118/94230402 0.0% 0/118 0.0% -20628485 -73601917 +3388 chr4 + 190214555 43343540 43343539 43343621 82 TCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTTTCTCTCTTTCTCTTCTT chr4 + 94230402 76521921 76521920 76522002 76521921 76521920 76522002 82 TCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTT ..:..:....:..::::....x::..x...x.....xx.:.......:.:.x.....x::..x:..x..x..:.....x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -33178381 -61052021 +3118 chr4 + 190214555 43343557 43343556 43343610 54 TCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTTTCTCTC chr4 + 94230402 74430681 74430680 74430734 74430681 74430680 74430734 54 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTC ..:......::..::.:......:.:...:..:....:.x..:.....:..:.. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% -31087124 -63143278 +4100 chr4 + 190214555 43343574 43343573 43343728 155 TTTCTTTCTCTCTCCTTTCCTTT-TCCCTTTTTCTCTCTTTCTCTTCTTCCTTCCCTCCCTCCTTCCT-TCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTTTTCCTTCCTCCCTCCC---TCCCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .....x....x..x..:......-.:.....x..:x:.:x::.:.x.x.:x...::..:x.:...:x.-.:.x.:::.x:..:...:...:....xxxx..:x.:...::x:..:.:.x:.......:..:....:....:.x.:.:..x.---...... 23M1I44M1I82M3I6M 97/155 62.6% 160/94230402 0.0% 5/155 3.2% -6832693 -87397709 +3054 chr4 + 190214555 43343689 43343688 43343741 53 TCCCTCCTTCCTTCCTTTTTCCTTCCTCCCTCCCTCCCTTTTTTCTTTCCTTT chr4 + 94230402 74430681 74430680 74430733 74430681 74430680 74430733 53 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTT ...:.::..::..........:.:..::..:..:.....x.:.::........ 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% -31086992 -63143410 +3234 chr4 + 190214555 43343709 43343708 43343765 57 CCTTCCTCCCTCCCTCCCTTTTTTCTTTCCTTTTTCTTTTTTCTTTCTCTTTTTCTT chr4 + 94230402 35385253 35385252 35385309 35385253 35385252 35385309 57 CTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTTT .:::......:...:.........:...::......:x...:xx:.........:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 7958456 NA +3678 chr4 + 190214555 43343726 43343725 43343831 106 CTTTTTTCTTTCCTTTTTCTTTTTTCTTTCTCTTTTTCTTC---TTTTTCTTTCTTTCTTTCTCTC---TCTCCTCTTTTTC-------TTTTTTTCTCTCTCTCCTTCCTTCCTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x...:.::.:...:.xx.x..:.:...:......:..---:..:.x....xx.....x...:---:..::x.......-------..:.:.:.:....:.:...:.......... 41M3I22M3I13M7I30M 75/106 70.8% 119/94230402 0.0% 13/106 12.3% -20353391 -73877011 +3319 chr4 + 190214555 43361551 43361550 43361636 86 CAGTCTACTAATCCAGACTCTGACATGACTGCAGTGATCTTGAATGACTTGATTAATTTCTTCTCAGCAGAATGTGGCTAAACAAT chr4 + 94230402 77502255 77502254 77502340 77502255 77502254 77502340 86 CAGTTTACAAATACATACTCTAACATGAATGCAAAGGAAGTAAATGACTGGATTAGTTGTTTTTAGGTCCTGTGTTGCTATACAAT ....:...x...x..x.....:......x....:x.:xxx.:.......x.....:..x:..:.x:.:xxx:...x....x..... 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% -34140704 -60089698 +3124 chr4 + 190214555 43367261 43367260 43367361 101 GAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGAGAGAAGGATGGTGGGAGGGAAGGAAGGAAGGAAGAGAAAGAAA chr4 + 94230402 73744688 73744687 73744788 73744688 73744687 73744788 101 GGAATAAATATGAAATTAAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAA .:..x..:x.x.:..xx....x.x:.:xx....:..:..::..:.:...:.:........:....:x::x:..:...::.x::..x...::x:.....x.. 101M 60/101 59.4% 101/94230402 0.0% 0/101 0.0% -30377427 -63852975 +3161 chr4 + 190214555 43378885 43378884 43378965 81 TTTTATTTCAAAGCAAAATGTCCATAAAGGAGTGGTTTTTAGAATTTTTTTACTCAATA-------TGTATTAAAACTGAATAATGTA chr4 + 94230402 74338909 74338908 74338992 74338909 74338908 74338992 84 TTTTATTTCAAAACACTACGTGTGGAAAGAAGTGGTTTTTAGAA----TTTACTTAACAGTGGAACTACATTAGAGATTAATAATTTA ............:..xx.:..x::x....:..............----......:..:.-------.::....:.:x.x......x.. 44M4D11M7I22M 59/77 76.6% 84/94230402 0.0% 11/77 14.3% -30960024 -63270378 +3225 chr4 + 190214555 43383312 43383311 43383371 60 TGTGTGTGTGTATATATGTGTGTGAGTGTATATATATGTGTGTGTATATATACACACACA chr4 + 94230402 47135177 47135176 47135236 47135177 47135176 47135236 60 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCA .....:.:..:...:.::..x:.x...x...:..:....:.....:..:.:......:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -3751865 -90478537 +3735 chr4 + 190214555 43383313 43383312 43383524 212 GTGTGTGTGTATATATGTGTGTGAGTGTATATATATGTGTGTGTATATATACACACACATTTCAATCCACG-----CTTTTCCAAATATAACATACATGCATGCACACACACACCACACACATATACATACACGCACACCACAGACATACATACGCATAAGAA--------AAAATTTAGTTCCAAACAACATCTC----TTCTCTGGTGATTTTATATAT-ATATCTCT chr4 + 94230402 79265519 79265518 79265743 79265519 79265518 79265743 225 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTA-----CAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTAATATCCAACTTTCAGTCATAATTGACACCATGTGGCTCTCTGATGATAATCTGTATGATATCTCT ..........:.::.........:x........:..::::....::.:.::..x...:....xx:.....:-----::.x.x:....::.x:x.:.x.x:x..x::::.-----..x.::...x.x::..x::..x..x...xx::..x:....::x..x..:--------..xx..:...:x:..x::...:.x:----:......:....xx.x.:...-........ 71M5I33M5D49M8I25M4I21M1I8M 125/207 60.4% 225/94230402 0.0% 23/207 11.1% -35882206 -58348196 +3045 chr4 + 190214555 43383491 43383490 43383551 61 ATCTCTTCTCTGGTGATTTTATATATATATCTCTCCCATATATATATAATATATATATATA chr4 + 94230402 78811844 78811843 78811904 78811844 78811843 78811904 61 ATCCCATCTCTTGTATACTCTTGTATATATCTCTTATGTATATATATGATAGATATATATA ...:.x.....x..:xx:.:x.:...........:x::.........:...x......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -35428353 -58802049 +4040 chr4 + 190214555 43384819 43384818 43384953 135 GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATTTATA-TATAT-TTATATAT----ATATTTATATATATATTTATATGTATATATCTATGTATCTCTCTCT-CTATATAT---TATATG chr4 + 94230402 4618356 4618355 4618501 4618356 4618355 4618501 146 GCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatg ..::.x.......::..............x:....::......x.x......-....xx....-.....-......:.----x..x.x...::x.x..xx...x.x..x........:x..x:x:...-:.......---...... 52M1I10M1I5M1I8M4I46M1I8M3I6M 102/135 75.6% 146/94230402 0.0% 11/135 8.1% 38766463 NA +3521 chr4 + 190214555 43384821 43384820 43384925 105 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATATTTATATATATATTTATATGTATATATCT chr4 + 94230402 60831530 60831529 60831627 60831530 60831529 60831627 98 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-------GTCTGTGCGCATGTGTGTATATTTCT ...x.....x.............x.x.x.x...:.:....:.:.:.:::.:.:x.:..x...:........:-------:.x.:.::::x.:.:.......x... 72M7D26M 66/98 67.3% 98/94230402 0.0% 7/98 7.1% -17446709 -76783693 +3378 chr4 + 190214555 43384823 43384822 43384925 103 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATATTTATATATATATTTATATGTATATATCT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT-------GGTCTGTGCGCATGTGTGTATATTT ...x.....x.............x.x.x.....:.:....:.:.:.:::.:.:..x..x...:x.x.....-------x:.x.:.::x:..:...:.....:. 71M7D25M 65/96 67.7% 96/94230402 0.0% 7/96 7.3% -17446707 -76783695 +3075 chr4 + 190214555 43384827 43384826 43384896 70 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATA chr4 + 94230402 60831530 60831529 60831599 60831530 60831529 60831599 70 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATA ...x.....x.............x.:.......:.:....:.:.:.:::x:.:x.x..xx..:..x.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -17446703 -76783699 +3209 chr4 + 190214555 43384829 43384828 43384897 69 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x.............:.:.......:.:....:.:.:.:x:.:.:x.x.xx...:..x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -17446701 -76783701 +3038 chr4 + 190214555 43384831 43384830 43384900 70 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATATTTA chr4 + 94230402 60831530 60831529 60831599 60831530 60831529 60831599 70 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATA ...x.....x...........x.:.:.......:.:....:.:.:x:::.:.:x.:..x...:..x.x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -17446699 -76783703 +3909 chr4 + 190214555 43384833 43384832 43384934 102 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATTTATATATATTTATATATATATTTATATATATATTTATATGTATATATCTATGTATCTC chr4 + 94230402 60831530 60831529 60831628 60831530 60831529 60831628 99 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG---GTCTGTGCGCATGTGTGTATATTTCTC ...x.....x.........x.x.:.:.......:.:....:.:x:.:::.:.:..x..x...:........:---:.:.:.::.:..:.:.x...:.x.... 72M3D27M 67/99 67.7% 99/94230402 0.0% 3/99 3.0% -17446697 -76783705 +3960 chr4 + 190214555 43450732 43450731 43450981 250 TATATTATAAATATACTTATTATATTATATATAATATATATTTAACATATAATATAATATAATATATATTATATATTATTTATATATATTATATATAATATATAATATATATTATTTATATATATTATATATAATATATAATATATATTATATCACATATATTATATATTA---------TACTATATATTATTTATATATTATACATAATACATAATATATAATATTATTTCTATAATATAATATAATACATAATATA chr4 + 94230402 26320189 26320188 26320428 26320189 26320188 26320428 240 TGTGTCATTAATAAAAT-ATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATT---------TATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTA------GTATGAAAAATTAAGTGTGATTTTATTCCTAAAATGTAA---AAGAGACAATACA .:.:.:..x....x.x.-...x.x......:..x.xx.xxx..:.:..x....xx:x.xx...x...x.:.:..:.xxx.xx..:............x......xx.......---------......:...xxx...xx....x.x.x:...:::....:.x...x.x.:---------:.:..:.x..:x...x..------::..:.x.x..x.x:.:.:..x.....:...x...:...---..x.x.:....:. 17M1D95M9D49M9I18M6D39M3D13M 150/231 64.9% 240/94230402 0.0% 28/231 12.1% 17130543 NA +3304 chr4 + 190214555 43491446 43491445 43491519 74 GAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGATATTTGCTTAAACAC-----ATTTTGCAGGAAATAATTTTTA chr4 + 94230402 91287128 91287127 91287206 91287128 91287127 91287206 79 GAGTCTCAATTTCAGGAAAAAAAAAAAAAAAAAAAGATAATTGCGTAGAAACCTGTAACTGTGTGGAAAATTTTGTTTA ...x...x:.:...::.......................x....x..:.x..-----.:.x..::.:....xx.x.... 52M5I22M 56/74 75.7% 79/94230402 0.0% 5/74 6.8% -47795682 -46434720 +3698 chr4 + 190214555 43492628 43492627 43492784 157 CTAATTACCTTTCAATTGTCCCATCT---CCAAAACACATTTAATCCACACATACACACATATAATGTGTATGTGTTCCAAACATATATATTATAAGGTATATATGTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATACACAAACACACA chr4 + 94230402 89748595 89748594 89748720 89748595 89748594 89748720 126 CTGAGAACCTTCCAGGTGAACTATCTGAGCAAAAACAT--------CACGCA-ATACCTAGATAATGTGTA-----------CATATATGTTAGA--------------GTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACA ..:.xx.....:..:x..xx.:....---.x......:--------...:..-.:..x:.x..........-----------.......:...x.--------------.......x:.........x...:....:.....:..x..:.::..x..... 26M3I9M8D6M1D18M11D13M14D51M 94/123 76.4% 126/94230402 0.0% 37/123 30.1% -46255967 -47974435 +3399 chr4 + 190214555 43492723 43492722 43492794 72 TATATATGTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATACACAAACACACAGAGATATATA chr4 + 94230402 39937177 39937176 39937248 39937177 39937176 39937248 72 TATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA ..............:...x.......:xxx.x....:..xxx......:.:...x.:.:...x....:.::. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 3555546 NA +3287 chr4 + 190214555 43492730 43492729 43492819 90 GTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATACACAAACACACAGAGATATATAATACCTTA-----CTGCCTGTAACATAAAT chr4 + 94230402 68837087 68837086 68837181 68837087 68837086 68837181 95 GTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCAGAACTTAATTTCCTGCCCTTGGCACATAT ..:x.x.:.....:....:..............x.:.:.:.:.:...x.::....x.xx.x...x.x.x....-----.....:x.::..:.x.. 73M5I17M 62/90 68.9% 95/94230402 0.0% 5/90 5.6% -25344357 -68886045 +3361 chr4 + 190214555 43492737 43492736 43492784 48 TGTGTGTGTGTATGTGTGTACACACACACATACATACACAAACACACA chr4 + 94230402 68837096 68837095 68837143 68837096 68837095 68837143 48 TGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA ....:......:.....::.....x.:.............x:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -25344359 -68886043 +3007 chr4 + 190214555 43492740 43492739 43492794 55 GTGTGTGTATGTGTGTACACACACACATACATACACAAACACACAGAGATATATA chr4 + 94230402 68837095 68837094 68837149 68837095 68837094 68837149 55 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA .....:..:.......::.......x.........:.x...::..x.x..x.x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -25344355 -68886047 +3156 chr4 + 190214555 43493672 43493671 43493743 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAAACTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...xx:......x.::....x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -32539534 -61690868 +3028 chr4 + 190214555 43523240 43523239 43523330 91 TGAGTAAGAAAAAAGAGAGAAGATATGAATGATCAATATCGGCAATGAAACATGAGGCATTACTACAGACCATAGAAATATTTAAAGAGAA chr4 + 94230402 78183272 78183271 78183362 78183272 78183271 78183362 91 TGAGAAAGAAATAGGAGAGAGAGCATCAGTTACAGGAATCAGCTATGGAGTGACAGGGAATTCAGCAGCCTGTGGAAATATTTAAGGAAAA ....x......x.:......::::..x.:.x.:x::x...:..x...:.:::xx...x.x.x.x:...x.::.:...........:..:.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% -34660032 -59570370 +3232 chr4 + 190214555 43530135 43530134 43530225 91 ATAAAAAAATAAT---TAGGTGAGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCGGGAGGCGGAGGTTGCA chr4 + 94230402 76033183 76033182 76033276 76033183 76033182 76033276 94 ATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..:...::..:..---:..xx.x....x......:.........::::........x.xx.x...x::.....:...:.:..x:xx:..:..:. 13M3I78M 60/91 65.9% 94/94230402 0.0% 3/91 3.3% -32503048 -61727354 +3416 chr4 + 190214555 43542213 43542212 43542277 65 TCTTTCTTTCTTTTTCTTTTTTTTCTTTCTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCCT chr4 + 94230402 34366984 34366983 34367048 34366984 34366983 34367048 65 TTTTTTTGTGTTTTCATTTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCT .:...:.x.x....:x.....x..............:...::..:.:.:...:..:.::..::.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 9175229 NA +3443 chr4 + 190214555 43554704 43554703 43554761 58 TTTCCATTTCCATTTCCATTTAATTTTTTTTCTTTCTTTCCTTCTTTTTTTTTTTTGA chr4 + 94230402 51851009 51851008 51851065 51851009 51851008 51851065 57 TTTCCATTGTCATTTCCATTTAA-TTTTTTTCTTCCCTTTCTCATTTTTTTTTCCTAA ........x:.............-..........:.:..:..:x.........::.:. 23M1D34M 47/57 82.5% 57/94230402 0.0% 1/57 1.8% -8296305 -85934097 +3464 chr4 + 190214555 43561563 43561562 43561748 186 GGAGAATCGCTTGAACCCAGGAGGCAGAGG--TTGCAATGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCTAAGTAGACATTTCTCCAAAGAGGATATACAAATGATTAGCACAT chr4 + 94230402 55781547 55781546 55781712 55781547 55781546 55781712 166 GAAGAAGGTCTGAAACTCAGGATGCAGAAGCATTGCAGCTAGCTG-----------TTTTATACCA---TGAACAATAAAAATG--------TTTTCAGTCAATTAAAAAAAAAAAAACACAAAAAGATGAGAAAACAGAACTTGAGTGAACATGTATTTTTAAAAAATTTATGAATGTTTAGAAAAT .:....xxx..x:...:.....x.....:.--.....::x...:.-----------..x:.:x...---..::...:..:.:::--------.:.:x.:xx..xx.............x.x.....:.x:.:....x....::.:...::....x.x.::xx.:.::..x..::....x....x.x.. 30M2I13M11D10M3D15M8D96M 105/164 64.0% 166/94230402 0.0% 24/164 14.6% -12219984 -82010418 +3064 chr4 + 190214555 43600272 43600271 43600372 101 CAAGTTCTTTTATTCATTAGTT---AGTTAACAAATATTCACCCTGTGTGAAAGATGTGGCAGCTCACAAGAATTCTGAGAAACATGCATTAAAAAGCCAACAG chr4 + 94230402 12634188 12634187 12634288 12634188 12634187 12634288 101 CACATTCTCTTTTCTATCAGTTGCAAGCTTGGGGAAAT---CTGTGTGAAAAAGAGAAGATAATTTGCAAGAACCTCAGGAAACATGCATTTAAAAGCCAACAG ..x:....:..x.::..:....---..:.x:x::.x..---.:x....x:.....x:x.::.::.::......::::::............x............ 22M3I13M3D63M 64/98 65.3% 101/94230402 0.0% 6/98 6.1% 30966084 NA +3004 chr4 + 190214555 43618832 43618831 43618881 50 TATGCAAAAAAAAAAAAAAAAAAAAAAAAACTAGAAAATCTAGGCAAAAT chr4 + 94230402 10494820 10494819 10494869 10494820 10494819 10494869 50 TGTGCAAGAAAAAAAAAAAAAAACAGGACATTAGAAAATCTAAGTGACAT .:.....:...............x.::.x.:...........:.::.x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 33124012 NA +3606 chr4 + 190214555 43675592 43675591 43675631 40 CTTCCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .......................x................ 40M 39/40 97.5% 40/94230402 0.0% 0/40 0.0% -31572457 -62657945 +3544 chr4 + 190214555 43675594 43675593 43675635 42 TCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ....::.................x.................. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% -31572453 -62657949 +3102 chr4 + 190214555 43675596 43675595 43675631 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 31074292 NA +3139 chr4 + 190214555 43675598 43675597 43675637 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -31572451 -62657951 +3316 chr4 + 190214555 43675598 43675597 43675633 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 31074294 NA +3438 chr4 + 190214555 43675598 43675597 43675633 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% -31572455 -62657947 +3102 chr4 + 190214555 43675600 43675599 43675635 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 31074296 NA +3209 chr4 + 190214555 43770127 43770126 43770169 43 TTTTTTCTTGTTTTTGTTTTTTGTTGTTGTTGTTTGTTTGTTT chr4 + 94230402 76208462 76208461 76208504 76208462 76208461 76208504 43 TCTTTCCCTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT .:...:.:.......x...x....................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -32438335 -61792067 +3749 chr4 + 190214555 43770127 43770126 43770170 44 TTTTTTCTTGTTTTTGTTTTTTGTTGTTGTTGTTTGTTTGTTTT chr4 + 94230402 21549963 21549962 21550006 21549963 21549962 21550006 44 TTCTTTCTTGTTATTGTTTTTTGTTGTTGTTGTTTGTTTGTTTT ..:.........x............................... 44M 42/44 95.5% 44/94230402 0.0% 0/44 0.0% 22220164 NA +3089 chr4 + 190214555 43770131 43770130 43770169 39 TTCTTGTTTTTGTTTTTTGTTGTTGTTGTTTGTTTGTTT chr4 + 94230402 18301256 18301255 18301294 18301256 18301255 18301294 39 TTCTTTTTTCTGTTTGTTGTTGTTGTTGTTTGTTTGTTT .....x...:.....x....................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 25468875 NA +3177 chr4 + 190214555 43781068 43781067 43781115 48 ACACACAAAGACATAAAATTTTACACAATATAATTGTATATTTATTTT chr4 + 94230402 22049517 22049516 22049564 22049517 22049516 22049564 48 ATACAGAAAGACAGAAAATTTTGCACTATATAATTGTACACCTATTTT .:...x.......x........:...x...........:.::...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 21731551 NA +3114 chr4 + 190214555 43787629 43787628 43787714 86 AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAAAGGAATAAGAAACAGAGAAAACAAATAATATAAAGTAACA chr4 + 94230402 25679596 25679595 25679681 25679596 25679595 25679681 86 AAAGCAAGAAACAAACAAGAAGAAAAAGAAAATCGGAACACAGAGAAGTCAAAAAGAACAAGGGAAAAAAGTTACACTAAGTAACA ...:x..:...x...x..:..:..........xx::.:x.x.:.:...xx.x..::....::.:...x..:.x.:.:x........ 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 18108033 NA +3379 chr4 + 190214555 43810448 43810447 43810558 111 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGATGGAGATTGCAG----TGA-GCCGAG---------ACCCTGCCACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033205 76033204 76033328 76033205 76033204 76033328 124 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC .....x....:.:.........::::........x.xx:x...x::...........:..x.xx:.::..:..----...-...:..---------:....:xxx....x.-.....x....... 73M4I3M1I6M9I15M1D13M 79/110 71.8% 124/94230402 0.0% 15/110 13.6% -32222757 -62007645 +3405 chr4 + 190214555 43814736 43814735 43814776 41 CCTCTCTCTCTTTCTCTCTCTCTTACACACACACACACACA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...::......:...........:................. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -31433312 -62797090 +3091 chr4 + 190214555 43814739 43814738 43814778 40 CTCTCTCTTTCTCTCTCTCTTACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::....:...........:x.................. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -31433310 -62797092 +3205 chr4 + 190214555 43823500 43823499 43823583 84 AGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAGAGAAATTA chr4 + 94230402 41112178 41112177 41112261 41112178 41112177 41112261 84 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATA ..:...:..:.:..x..x...x...x....x.:..:..xx.x.:.x..........::.x.x......x:..:...::x..x.. 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 2711322 NA +3132 chr4 + 190214555 43880411 43880410 43880488 78 GAAGGAAACGAGGGAGGAGAGGAAAGAAGGAAGAAAAGAAGGAAGGAAGAAAGGAAAGAAGGGAGGAAGGAGGAAGGA chr4 + 94230402 94029716 94029715 94029793 94029716 94029715 94029793 78 GAGTGAAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAAGAGGGATGA ..:x....x.....:..:.:.....x..:......::...::..:.:.:...x:..xx:x.x:.x...:....:.x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -50149305 -44081097 +6085 chr4 + 190214555 43880436 43880435 43880606 171 GAAGGAAGAAAAGAAGGAAGGAAGAAAGGAAAGAAGGGAGGAAGGAGGAAGGAAAGGAA------------------AGGGAAGGAAAGGAAAGGAAAGG-------AAAGGAAAGGAAA-GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGGCAGGCAGAAAGGGAAGAAGGGAAGAA chr4 + 94230402 1500703 1500702 1500899 1500703 1500702 1500899 197 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaagga ....::.::....:x..::.......:x..::.:.:.......::.::x......:.:.------------------....:.:x.......:.:...x.-------...:.....:...-.....x::...:::.::.....:::..::....:.....:..:..::.:.x.::::..:.::....::..:...:. 59M18I23M7I13M1I76M 111/171 64.9% 197/94230402 0.0% 26/171 15.2% 42379733 NA +3075 chr4 + 190214555 43880472 43880471 43880568 97 GGAGGAAGGAGGAAGGAAAGGAAAGGGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA chr4 + 94230402 2864102 2864101 2864198 2864102 2864101 2864198 97 GGAGGAAGGAGGGCAGCTGAGTAAGACTGCAAATGCAAAAGAAATGCAAGAAAAGGAAAGGGGGAAACTGGAGAATAAGGGAAACGCAAGCCAAGAA ............:x:.xx::.x...:xx:x:..x.x...:....x.x...:..........:::::.xx...:.:x..:.....x.x...xx...:. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 41016370 NA +3013 chr4 + 190214555 43904406 43904405 43904473 68 AATCCCCTGATTTTTGCCCCTTTAACTATTTTTCTTTCTCTCTCTCTCTTTTTTTTTTCCTTTTTTTA chr4 + 94230402 72001415 72001414 72001482 72001415 72001414 72001482 68 AATTAACTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTA ...:xx....:.x::x:.....:x...x::.x.:...:.:..................:..::..:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -28097009 -66133393 +3077 chr4 + 190214555 43909390 43909389 43909435 46 TCATAAAAAAAGAAAAAAGAAAAGAAGAAAGAAAGAAAGAAAGGAA chr4 + 94230402 2216129 2216128 2216174 2216129 2216128 2216174 46 TTACAGCAAAAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAA .:.:.:x.........:...:.....:..:.........:...... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 41693261 NA +3376 chr4 + 190214555 43909395 43909394 43909512 118 AAAAAAGAAAAAAGAAAAGAAGAAAGAAAGAAAGAAAGGAAGGAAGAGAGACAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG-AAGGAAAGAAAGAAAA chr4 + 94230402 49044652 49044651 49044769 49044652 49044651 49044769 118 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAA-GCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAA ....:.xx...:.........x..:::.xx.::.:x:.xx..:....x.:::..x:....-.x.xx...x:..:....:.:..:xx..:...:....:....-:.::..x......... 60M1D41M1I16M 75/117 64.1% 118/94230402 0.0% 2/117 1.7% -5135257 -89095145 +3182 chr4 + 190214555 43909448 43909447 43909602 155 GAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAAAGTTACAATATAAGGTGCTACTATGGTGTCAATTCAGTGAGATGTTTAAATATAGAGAAACTCAAGAAATGAAAGTGTATGAAAATTGAA chr4 + 94230402 1500703 1500702 1500833 1500703 1500702 1500833 131 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGG-------------AATaaaggaag------gaaaatggaaa-----aaaaaaagaaagaaaatggaaatagaa ...:::.......:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:.::..x.:.xx:::....:...x.-------------...xx..x:..------:..x..:..:.-----..:...x.....x:x...:....x... 82M13D11M6D11M5D27M 84/131 64.1% 131/94230402 0.0% 24/131 18.3% 42408745 NA +3052 chr4 + 190214555 43942267 43942266 43942332 66 TCTCATTGTGGTTTTGATTTGCATTTCTCAAATTATAAGAATCTTAGAAGAAAAGGCAGGAAAAAA chr4 + 94230402 79083077 79083076 79083142 79083077 79083076 79083142 66 TTTCACTTTGGTATTTGTCTGCATTTCTTCAGTCATAAGTACATAAGAAGAATTGTCAGGAAAAAA .:...:.x....x..x:.:.........:x.:.:.....x.:x.x.......xx.x.......... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -35140810 -59089592 +3175 chr4 + 190214555 43949233 43949232 43949294 62 AAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 83419833 83419832 83419894 83419833 83419832 83419894 62 AGGGCAAAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAA .::.x.....:...x.....:x:.x:....:.x....x...x..:.............:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -39470600 -54759802 +3711 chr4 + 190214555 43949247 43949246 43949332 86 GAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241501 75241500 75241586 75241501 75241500 75241586 86 GATGGTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ..x..x..:x.....:x::...xx.x...x............:..........:...x..:.xx.:......x..:.x.x..:.:. 86M 61/86 70.9% 86/94230402 0.0% 0/86 0.0% -31292254 -62938148 +3651 chr4 + 190214555 43949267 43949266 43949394 128 AAAGA--AAGAAAGAAAGAAAAAGAAAGAA---------AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044653 49044652 49044788 49044653 49044652 49044788 136 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAA .....--..::.::......x....:.xx.---------.......x..:x.:x..:.::x.xx...x:......---.:....:xx...............:x:..::.x.:...:..:...:...x....x.:::.. 5M2I23M9I36M3D61M 85/125 68.0% 136/94230402 0.0% 14/125 11.2% -5095386 -89135016 +3639 chr4 + 190214555 43983605 43983604 43983765 161 AAGGAAAGAAGGAAGGAAGGAGGGAGGAAGGGAGGGACAGAGGGAGAGAGGGAGGGAGGGAAGGAAGGAAAGGGAAGGAGGGAAGGAAGGAAGGAAAGGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAA---GGAAAGGGAAGGGAAGGAGGGAGGGAT chr4 + 94230402 49044662 49044661 49044818 49044662 49044661 49044818 157 AGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGA------GAAAGGGAAG-AGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAAT .::....::.:x...::.xx....:x.:xx:..::....::x:.x....:.x.xx:..x..------..........-..xx..:...:....:..:.x...::.x.:...:......:...x....x.:::..---:..xx:.....:.::::.:x...x:.. 61M6D10M1D56M3I27M 94/154 61.0% 157/94230402 0.0% 10/154 6.5% -5061057 -89169345 +3813 chr4 + 190214555 43984773 43984772 43984913 141 AAGAGATCAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAAGGGAGAAAG--AAAGGAAAGAAAG----GAAAGGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGACAAAAAGAGGAAAAGAAAGGAAAAAGAAAAAAA chr4 + 94230402 65771192 65771191 65771337 65771192 65771191 65771337 146 AGAAGACTGAGGAAAA-AAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA .::...:::.......-.....:.:x:.:.......:...x:x:...:--.:.........::----..:x.::..x:..x.xx:.:.......:..::.:x...x.....:x...:....x::x..x:..:xx.:x..:....... 16M1D31M2I13M4I80M 89/140 63.6% 146/94230402 0.0% 7/140 5.0% -21786419 -72443983 +3085 chr4 + 190214555 44007142 44007141 44007197 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAGTTACATGCAGGTTTTTGACTATGTAGAA chr4 + 94230402 85060046 85060045 85060101 85060046 85060045 85060101 56 AAAAAAAAACAAAAAACAAAAAAAAAAGGTAGACACAAGCTTTGGACAAGATAGAA .........x......x...........x..x.::..:.:...x...x.x:..... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -41052904 -53177498 +3072 chr4 + 190214555 44013670 44013669 44013715 46 AAAAAAAAAAAAGAGAGAGAGAAAATAGAAAATGACTGACTGAATG chr4 + 94230402 53933651 53933650 53933696 53933651 53933650 53933696 46 AAAAAAAAAAGAGAGAGAGAGAAAGGAGAAAAAGAATGTTTGAATG ..........:.............:x......x..x..x:...... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -9919981 -84310421 +3305 chr4 + 190214555 44022377 44022376 44022466 90 ACATATAGGTCAATAGATCTCCATGAAACATAAAAATAGTAAAAAGAAGGAGAAAAAAGAGGAAAGGGAAGGGAAATAAAGTATACAAGT chr4 + 94230402 61158161 61158160 61158250 61158161 61158160 61158250 90 ACACACTTGCTAATAGGTGGCCAAAGTTGCTAAAAATATTTAAAAGAAGGAGAAAGAAAAGAAAGTGGGAAAAAAAGGAAGTGTAAAAGT ...:.:xx.::.....:.xx...x::xxxx........x.x..............:..:..:..:x..:.:::...x:....:..x.... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% -17135784 -77094618 +7151 chr4 + 190214555 44034242 44034241 44034687 446 TGTCAGAGGAAATCAAGACAAATAAAATGTGGCTACCTTGCATAAGGTTGCATGAAAGAA-TTCCCACAATAGCTGTTTGCTAAAGGCAGT-GTTTTATAGTCTTAATTATAACACAACTGGAAAATCATAGAGTGCATATTCAAATTCATTTACCTTATTTGTTTTTCACCCTTAGGTACAATATTGTAAACAACTGTATTTG-AAATCTGAAACAG----ATTTATTTCACACCAGTGTTTATTCATTCTTAGTCAAATGGACTTCCTTCTAGCAGTATGTCATCATGTATAATACTCTGGCAAGCCAGCATTTTCATTTCATTAAATGGCATATATTTTATGGCTCCAAATGCTTTTTAT-----------TTGTTACTGAAGAATCTAGTAATAATTGTACAATGTGAACTCCTGATTACTAGGAGGATATTTTTGCAAAGTAAATAGTTCACTAATTAC chr4 + 94230402 69705823 69705822 69706266 69705823 69705822 69706266 444 TGTGACAGCAAACCTAGAAAAAAATATTGT------CATTCATAGAAGAGCACGAGAGGGGCTCCCACATTAGCTGTTATGTACATGAACTCTTTTTATAACCTTAATTATATCACCACTGGAAATTCAGCTACTGTGTATCTAAATTCATTAGCACAAGTTGTTTTTTTCTTTGGGGT---GTAGAGTATATAACTACATCTGAAAAACTAAAACAGTGAAATTTG--TCATGCCCATGTTTATTTTGTTTTA---AAATTGACTTTCAACAAGCAATCCAATATCTAGTAAAAGGCTCCAGTCAGAATGGGTTATAATGTCATGACAGTGCCTTTG-TTAATAGCTACGAATATTGTCTTTCCAACTACTTATGGCTGCTGAAAAGCTTGTTAGTGGGGGCAGAA-ATGAGCTGCAAATGAGCATATACATATCCTAGTGAAG----TAGTTCAGCAACTGC ...x.x..x...:.x...x...x.x.x...------.x.x....:::xx...:..:..::-:.......x........xxx..x.x.x.x.-x.......::..........x...x........x...xxx.x..::...::.........x:.x:x.x........:x.::.x:...---:..xx...x.:....::..:..-...x..:......----....:--...::..x:........:xx.:...---....x.....:.xx.x....:.x::x:...xx...x..x:...::.:x..xxx.x:..x.x..x....x.x.xx..x.x.:-..x..:...x.:...::.x.:.x.-----------.x.:.:.....:.:::.:x..:.::xx.:.x..-:...:..x.x:..x.x:.x:x:x....::.x.::...----.......x:..:.:. 30M6D24M1I30M1I87M3D22M1I13M4I5M2D25M3D81M1D24M11I33M1D37M4D15M 270/426 63.4% 444/94230402 0.0% 38/426 8.9% -25671581 -68558821 +3021 chr4 + 190214555 44054441 44054440 44054491 51 AAAACAAAAAACAGAAGAAACAAAGAGAAAGAAACTATCAAATAAATAATA chr4 + 94230402 67558797 67558796 67558847 67558797 67558796 67558847 51 AAAACAAAAAGCAGGAGAAAAAAAGAGCAGAAAACAAACAAACAAACAACA ..........:...:.....x......x.::....x.x....:...:..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -23504356 -70726046 +3154 chr4 + 190214555 44103777 44103776 44103834 58 TTTCTGTCCTTTTTTTTTTTTTCTTTTATCCTCTTTGATGTCCTTGGAAATTTGATTG chr4 + 94230402 31877419 31877418 31877476 31877419 31877418 31877476 58 TTTCTTTCTTTTTTTTTTTTTTGATTTGATCTCTTTGAAGTCCACAGAGATTTGTTTG .....x..:.............xx...:x:........x....x::..:.....x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 12226358 NA +3415 chr4 + 190214555 44180573 44180572 44180652 80 CAGTATACATACATGCACACACACACACACACACACACACACACACACTTAGATGCATTTATTATGCTGAAATTTTTTCA chr4 + 94230402 10735844 10735843 10735923 10735844 10735843 10735923 80 CAGAAAACATGCTTGCACACACACATCCACATCCACGCTCACACACTCCCAGATGTGTCTCACATGCACACATTCATTCA ...x.x....:.x............:x....:x...:.x.......x.::.....::.:.xx:....xx.x...:x.... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 33444729 NA +3039 chr4 + 190214555 44198097 44198096 44198148 52 AAGTAAAGAAAAATGAATTAAAAAAAATAAACAAAACCTCTGAGAAATATGG chr4 + 94230402 7667023 7667022 7667074 7667023 7667022 7667074 52 AAACAATGAAAAATGAATTAAAAAAAAAAAAAAAAGACTCTCAGAAGTAAGG ..::..x....................x...x...:x....x....:..x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 36531074 NA +3211 chr4 + 190214555 44212857 44212856 44212960 104 ACCAACATCTCATCTTTTCATTTTTACTTTGTTTCACTTTTCCTTTGCATTCACTCTTCTTTTGTCTTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGAT chr4 + 94230402 28945621 28945620 28945724 28945621 28945620 28945724 104 ATCAATTTCTTTCCTCTTCTATTTCACTTTAGGTTTCATTGCCTTTTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTCTCCTAAAGAT .:...:x...:x:..:...xx...:.....:xx.:x.x..x.....x:x.x:::x:x.:.x....:x.....x................x...x.::.x:.... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% 15267236 NA +3304 chr4 + 190214555 44235548 44235547 44235590 43 TATATATATATATATATATATATATATATTTAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:.....:........... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 17229552 NA +3508 chr4 + 190214555 44242555 44242554 44242622 68 GCGAAAGGGCGGGATTCCGTCTCAAAAACAAACAAACAAACAAACAAACAAAACAAAAAAAAAACTTG chr4 + 94230402 44082656 44082655 44082712 44082656 44082655 44082712 57 GCAGAAGGGTGGGTTTCTGTC--AAAAA---------AAACAAACAAACAAAACAAAAAAAAAACTTG ..::.....:...x...:...--.....---------............................... 21M2D5M9D31M 52/57 91.2% 57/94230402 0.0% 11/57 19.3% 159899 NA +3096 chr4 + 190214555 44320133 44320132 44320246 114 CTGCCCTCACACTGGGTGACAGAGCAAGCCTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAATTGATGCTCTAGT-----------CTGCTTCCATGGGGCTTCAAATC chr4 + 94230402 18047918 18047917 18048039 18047918 18047917 18048039 122 CTGCCTTAATGATGA---ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCTAAGGTATGACTGACAGCTGCCACCATGGATTGTCATGTC .....:.x.::x..:---.....:...x...::x...:............x........xx:..:.x..x.:.:.:.::xx.....xx:..-----------....:x......:x:x...x:.. 15M3D73M11I23M 74/111 66.7% 122/94230402 0.0% 14/111 12.6% 26272215 NA +3096 chr4 + 190214555 44336010 44336009 44336079 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -31697187 -62533215 +3074 chr4 + 190214555 44343838 44343837 44343879 42 TTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTTTGA chr4 + 94230402 77841003 77841002 77841044 77841003 77841002 77841044 42 TTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGATGA .....................x...x...........xx... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -33497165 -60733237 +3096 chr4 + 190214555 44494063 44494062 44494120 58 GAGACTCTTTCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAA chr4 + 94230402 73002033 73002032 73002090 73002033 73002032 73002090 58 GATATTCTGTCTTGGAGACAAATGAAAAAATGAAGGAGGAAAAAGAGAGAGAAAGAAA ..x.:...x.....:.:.x...x:......x:..::.::...:............... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -28507970 -65722432 +3353 chr4 + 190214555 44494086 44494085 44494142 57 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAAAAAAAAAGAAAAGTCA chr4 + 94230402 44890393 44890392 44890449 44890393 44890392 44890449 57 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGCTA ..::.............:............:..:...x.x.xx.........x.::. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -396307 -93834095 +3086 chr4 + 190214555 44494087 44494086 44494122 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ............................:...:... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -30806369 -63424033 +3014 chr4 + 190214555 44494088 44494087 44494145 58 AAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAAAAAAAAAGAAAAGTCATTA chr4 + 94230402 89572266 89572265 89572323 89572266 89572265 89572323 58 AACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGATTA ..x.:............:.........:....x.:x...::x.x..x....:.x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -45078178 -49152224 +3879 chr4 + 190214555 44504482 44504481 44504546 65 GTGGTGCATGTCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ........:..--.....:...........::........x.xx.x...x.............:. 11M2D52M 53/63 84.1% 63/94230402 0.0% 2/63 3.2% -31528719 -62701683 +3236 chr4 + 190214555 44505252 44505251 44505329 78 TCTATAATCTTTTTTTTTTTTTTTTTTTTAAATTTAAAACTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGG chr4 + 94230402 40447777 40447776 40447854 40447777 40447776 40447854 78 TCTAAAGTCTTTGGTTTTTATTTTTTTTTTAATCTCAAGCTCCTTTTCCTGCTTTACGTCATGCTTTCCATTTTAGAG ....x.:.....xx.....x.........x...:.x..:..::....::.x:...x::.:..:..:.xx:......:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 4057475 NA +3456 chr4 + 190214555 44518195 44518194 44518314 120 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CCTTCCTTCCTTCCTTTCTTTCTTTCTCTTTCTCTCTTTCATTCTTTCTTTCTTTTTTGAGACGGA chr4 + 94230402 63697128 63697127 63697247 63697128 63697127 63697247 120 TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTC-----TTCCTTTTTATTTAAGAAGAA .:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----.:..x...::.:x.xx.......:..:.:.::.:......-----...:..:..x...:...x.:. 54M5I40M5D21M 75/115 65.2% 120/94230402 0.0% 10/115 8.7% -19178933 -75051469 +3006 chr4 + 190214555 44518227 44518226 44518290 64 TTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTCTTTCTCTCTTTCAT chr4 + 94230402 13214822 13214821 13214885 13214822 13214821 13214885 64 TTCTTATGTTCCTTAGTTCATTGCTTGCCTTCTTCCCTCCTTTCTGTCTCTCTCTCACATTCAT .....x:x...:..xx...x..x...x.:.:.....:.:......x.....:....x.x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 31303405 NA +3125 chr4 + 190214555 44528990 44528989 44529040 51 TTTTTTTTTTCTTTCTTTACTTTTCTTCTTTCTTTCTTTCTTTTTTTTTTT chr4 + 94230402 8296022 8296021 8296072 8296022 8296021 8296072 51 TTTCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT ...:...x..:.xx...:.x.....:.:................:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 36232968 NA +3357 chr4 + 190214555 44538022 44538021 44538091 70 CATACTAGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x.:.::..:.--....:.:...........::........x.xx.x...x.:...........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -31495175 -62735227 +3233 chr4 + 190214555 44556741 44556740 44556805 65 GAGAAAATG-------TTATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325485 27325484 27325556 27325485 27325484 27325556 72 GAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:.....-------..:....:.:x.:x.:x..x..............:.........::..::...... 9M7I56M 50/65 76.9% 72/94230402 0.0% 7/65 10.8% 17231256 NA +3136 chr4 + 190214555 44556752 44556751 44556804 53 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA .......::..:...::....x:.........x...........x..x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 37699142 NA +3028 chr4 + 190214555 44556753 44556752 44556807 55 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....:.:x.:x.:x..x..:...........:.........::...:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 17231251 NA +3320 chr4 + 190214555 44556759 44556758 44556828 70 TATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTA chr4 + 94230402 85834533 85834532 85834602 85834533 85834532 85834602 70 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...x:..x.:.:.x.................:.xx:...:x::...:.......x...:..:.x....:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -41277774 -52952628 +3027 chr4 + 190214555 44556763 44556762 44556829 67 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTAT chr4 + 94230402 85834533 85834532 85834599 85834533 85834532 85834599 67 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ...x:..x.:...x.................:.xx:.:..x::...::...:..x...:..:.x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -41277770 -52952632 +3252 chr4 + 190214555 44556765 44556764 44556827 63 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x:..x.....x.................:.xx..:..x::..::....:..x...:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% -41277768 -52952634 +3181 chr4 + 190214555 44556767 44556766 44556831 65 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x:..x.....x.................:.xx..:..x:::..:....:..x...::.:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -41277766 -52952636 +3260 chr4 + 190214555 44556769 44556768 44556832 64 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTTT chr4 + 94230402 85834533 85834532 85834596 85834533 85834532 85834596 64 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTT ...x::.x.....x...................xx..:..x.:...:....:..x..::..x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -41277764 -52952638 +3063 chr4 + 190214555 44556771 44556770 44556831 61 TATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTT chr4 + 94230402 79265520 79265519 79265580 79265520 79265519 79265580 61 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .:..........::........xx...:....:...:.:..:.::.:.:::.x.::..... 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -34708749 -59521653 +3784 chr4 + 190214555 44585875 44585874 44585948 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.xx.x...x.:.....:.....:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -31447329 -62783073 +3059 chr4 + 190214555 44592953 44592952 44593019 67 TATGTGTATGTGTTTGTATGTGTGTATACATATATATACATTCAGATACATATACATATATACGAAT chr4 + 94230402 70094144 70094143 70094210 70094144 70094143 70094210 67 TAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..x:.:.:.........x...x.....::....:....:.xx...x.x....x.:......:.:x.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -25501191 -68729211 +3378 chr4 + 190214555 44593020 44593019 44593098 79 GTGTCTGTATATATATGAATATATGTCTGTATGTGTGTGTATATATATGTATACACACACAGACACATATAAATACTTT chr4 + 94230402 60831517 60831516 60831595 60831517 60831516 60831595 79 gttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATT ..x:.::..:....x.:xx.x.:.x...x.x.x.x...........:.............:x....x.x.......x.. 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -16238497 -77991905 +3923 chr4 + 190214555 44618171 44618170 44618272 102 ACCTTTGGCAAGTGATTTAGCCTCTCTGTAACTCAGTAGCCTCACCTATTAAATGGAGGTGATGATAATTGC--ACTTCATAAAATTACAGTGAGGATTAAACA chr4 + 94230402 83501142 83501141 83501245 83501142 83501141 83501245 104 ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCA ..::.x.....:.x.:...:...x.x...:x......xx:.:.....:.x........x....::.....:.--..:...:.:::x..:x......x.x..x.. 72M2I30M 70/102 68.6% 104/94230402 0.0% 2/102 2.0% -38882971 -55347431 +3090 chr4 + 190214555 44638209 44638208 44638261 53 ATTTTTTTTTTTTTTTTTTTGGCTGTTTGTTGGCTGTTTTTATTGCCGATTCA chr4 + 94230402 81344618 81344617 81344670 81344618 81344617 81344670 53 ACTTTTTTTTTTTTTTTTCTGATTGTTTGTTTTCAATTTCTACTGCCTATCCA .:................:..::........xx.x:...:..:....x..:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -36706409 -57523993 +3148 chr4 + 190214555 44640123 44640122 44640177 55 TTCATCAGAACTATTGGTCTAGTTTTTGTTGTTGTTGTGTCCTTGTCTGGTTTTG chr4 + 94230402 59146405 59146404 59146459 59146405 59146404 59146459 55 TTGATCAAAACTATTCTTCCCGTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTTG ..x....:.......xx..:x.................x.x:....:..x..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -14506282 -79724120 +3051 chr4 + 190214555 44663548 44663547 44663599 52 TTTTTCTTTGTGTGTGTGTGTGTGTGTTGTTTGTGTGTTTTTCTTTTTTCTC chr4 + 94230402 3997762 3997761 3997813 3997762 3997761 3997813 52 TTTTACTTTGTGTGTGTGTGTGTGTGTTTTATGAATTATTTGCATTTTTCTC ....x.......................x.x..x:.xx...x.x........ 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 40665786 NA +3205 chr4 + 190214555 44709847 44709846 44709920 74 GTGCACCTGAAGTCCCAGCTACTTAGGAGGCTGGGGTGGGAAGATCTCTTGAGCCCTGGAGGTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..x...:..........:::......:.x:xx.x::.x.x.....:...x.:..x..x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -31323357 -62907045 +4103 chr4 + 190214555 44743644 44743643 44743757 114 GATCTGGGAAAATGAGTGATTT------GGAGCCAGACATAGTGGGGTGCACCTGTAGTCCCAGCTCCTCAGGAAGCTGAGGCAAGAGGATCCCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033160 76033159 76033277 76033160 76033159 76033277 118 GGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:.......:.:x..:..x.------:.:::x.x...:.....--.....x......:......x..::::.:......x.xx.x.:.x.x.....:.....:..:..x:.....:.. 22M6I17M2D73M 77/112 68.8% 118/94230402 0.0% 8/112 7.1% -31289516 -62940886 +3400 chr4 + 190214555 44809654 44809653 44809749 96 TGTACATATATAATATATATATGTATATATATTATATATATATGTATGTATGTATTTGAGAAATGTCTGTTCATGTCCTTTGCCCACTTTTTAATT chr4 + 94230402 72800222 72800221 72800307 72800222 72800221 72800307 86 TGTTTATATATAATATACATATGTTCATGTGTCAAATATATATATATGCACGCTATTAAAA----------TATGATCTGTGTCTACTCTCTAACT ...x:............:......x:..:.:.:.x........:....:.:.:xx..:.:.----------:...x:..x..:.:...:.:...:. 61M10D25M 60/86 69.8% 86/94230402 0.0% 10/86 11.6% -27990568 -66239834 +3051 chr4 + 190214555 44861142 44861141 44861187 46 CTGCATTTTTTATCTCTTTCTTTTTTTTTTTTTTTTTGAGATGGAG chr4 + 94230402 34825727 34825726 34825772 34825727 34825726 34825772 46 CTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGG .........x.:...:....................x.:.:x..:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 10035415 NA +3198 chr4 + 190214555 44871509 44871508 44871573 65 ATATATGTATATGTGTGTGCATATATATGTGTGTGTGTGTGTATATATATATATATAGAGAGAGA chr4 + 94230402 29797126 29797125 29797189 29797126 29797125 29797189 64 ATTTCTGCACATG-GCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAA ..x.x..:.:...-.::.:....::....:......:......x.........:.:.x.....:. 13M1D51M 48/64 75.0% 64/94230402 0.0% 1/64 1.6% 15074383 NA +3018 chr4 + 190214555 44890909 44890908 44890949 41 TATATATATATATATATATACACACACATATATACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.......................x.x.:........ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 40481827 NA +3459 chr4 + 190214555 44902923 44902922 44903004 82 GTGACTCCCAGGAGCCAAAGTTAAAGACAAAAACAGGAGAAATAAGAAAAAAAGTCAGTATATAATTTTATATTTCTGAATA chr4 + 94230402 10359976 10359975 10360055 10359976 10359975 10360055 80 GTGTCTTCCAACA--TAAGAGTGGAGATAAAAACAGTAGAAATAAAAAATAAAACCAGTAACTGCTTTTAAATTTCTGAACA ...x..:...:x.--:..::x.::...:........x........:...x...::.....xx.:x.....x.........:. 13M2D67M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 34542947 NA +3266 chr4 + 190214555 44903461 44903460 44903495 35 GCTCTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTT chr4 + 94230402 14148428 14148427 14148462 14148428 14148427 14148462 35 GCTCTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 30755033 NA +3471 chr4 + 190214555 44915492 44915491 44915599 108 AAGCTACAAAACAAATATATAATTATATATGTGTCAATAATACATGTACATTTTGCAATCATATGTGTGTGTATATATGTATATATATATATAAAATAGTACATATTT chr4 + 94230402 17045070 17045069 17045163 17045070 17045069 17045163 94 AAGAAATATAAAAAATATAGAGTTAAACGTGT--------------TACTTTGTATAGTAAAGTGTAGGTGCGCATATGTGCATATATATATAAAATTGTACACATTT ...xx.:.x..x.......x.:...x.::...--------------...x..x.::.:.x.x:...:x...:::......::...............x.....:.... 32M14D62M 67/94 71.3% 94/94230402 0.0% 14/94 14.9% 27870422 NA +3340 chr4 + 190214555 44943576 44943575 44943689 114 TTTATAAAATATTCAACCAAACACTTGCTAAAACTGACTTAATTTTTAGAAAAAATAACACTGGAAAATG-TATTTAGTATCCTCATATTTTGCTA-AACAATGTATTTTAGGAGA chr4 + 94230402 56890718 56890717 56890833 56890718 56890717 56890833 116 TTTTTAAAACATGAAAATAAAGTATTGCAAACACTGAATTAAGTTTTAGAAAAAATAACATCGAAGTTAGCTATTTAACGAAATCTTGTTCTGGAATAACAATGTATATGTGAAGA ...x.....:..xx..x:...xxx....x..x.....x....x.................::.:.:xxx.-......:::xxx..x.:..:..xx.-..........x.xx.:... 70M1I25M1I19M 79/114 69.3% 116/94230402 0.0% 2/114 1.8% -11947142 -82283260 +3873 chr4 + 190214555 45006608 45006607 45006689 82 GTGGTGGCACACACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCATGAGAATCTCTTGAATCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.:............:........x.x..x...x.x......:....:..x.xx:..:..:.. 6M5D71M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -31026593 -63203809 +3436 chr4 + 190214555 45008073 45008072 45008156 84 CTAGTTACTTCAGATTTTCTTTTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTTGAGATGGAGTCTCCCTCTGTC chr4 + 94230402 21644417 21644416 21644495 21644417 21644416 21644495 79 CTGATCATTCCAAACTTTTTTTTTTCTGTGTGTGTGTGTGTGTGTAGCTAAAGGCCTGTTTTCAA-----AGTTCCTGCCTGTC ..::.:.:.:..:.:...:..........................:xx.:x:x.::......::.-----...::.:x:..... 65M5D14M 55/79 69.6% 79/94230402 0.0% 5/79 6.3% 23363656 NA +3476 chr4 + 190214555 45023464 45023463 45023576 113 GATATCTATATATCTATTTATATATAGATAGATATCTATATATCTATTTATATATAGATATCTATA-TATCTATTTATATATAGATA--GATATCTATATATCTTCATATATAGAT chr4 + 94230402 74593217 74593216 74593332 74593217 74593216 74593332 116 GGTATGCATATGCATAAACATGCATAGATAGATATGTATATATCAATTTATATGCATTTATCCATCTTAACTTTCTGTATCCATTTACTGAAATCTATTCATTTCCCTGTAAAAAT .:...x:....::x..xx:..::............x........x........::.xx....:..x-..x..x.:.:...x:.xx..--..x......x:..:.:.x.:..x.:.. 66M1I20M2I27M 77/113 68.1% 116/94230402 0.0% 3/113 2.7% -29569753 -64660649 +3509 chr4 + 190214555 45024389 45024388 45024483 95 AGGTATACCTATATATCTTTATATATAGATATCTATATACAGATATATAGAGATAGATATCTATATATAGTTATATAGAGATATATATCTATATA chr4 + 94230402 88832556 88832555 88832649 88832556 88832555 88832649 94 AGCTACACTGAAACTCCTTAAGATGTA-ATACCTGAACACTGAAATCCTAAGATAAAAAGATATAGATAGTTATATATAGATATATATCTATATA ..x..:..:x.x.:x:...x.x..:..-...:..:x.:..x..x..x:x:.....:.x.xx....x...........x................. 27M1D67M 67/94 71.3% 94/94230402 0.0% 1/94 1.1% -43808167 -50422235 +3044 chr4 + 190214555 45026444 45026443 45026496 53 TCTATAT--ATCTCTCTCTATATATAGATCTATATATATCTCTCTATATATAGAT chr4 + 94230402 31820589 31820588 31820643 31820589 31820588 31820643 55 TCTGTATCAATCTCTCTCTCTATATTGATATATATATATATCTCTCTGTATGGAT ...:...--..........x.....x...x.........x.....x.:...:... 7M2I46M 45/53 84.9% 55/94230402 0.0% 2/53 3.8% 13205855 NA +3268 chr4 + 190214555 45059744 45059743 45059818 75 TGACACAAGTAAAAATAAAAAGTTGAAATAACTTCATATTTATAATATGATTGTATAATTATTAAAAACTTTCTC chr4 + 94230402 73294488 73294487 73294559 73294488 73294487 73294559 72 TAACTCAAGGGAGAATAAAATATTGAAATATCTGTGTATTTATAATATAAGTGTAGAAATATT---TATTTTCTC .:..x....x:.:.......x:........x..x::............:.x....x..x....---x.:...... 63M3D9M 55/72 76.4% 72/94230402 0.0% 3/72 4.2% -28234744 -65995658 +3972 chr4 + 190214555 45102234 45102233 45102445 212 GAGAAAGGGATTCCAGAAAAAGAAAGAAGAAAGAAAGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGA--AAAAGAAAGAAAAAGAAAAGAG-----------AGAGGAGGAAG chr4 + 94230402 59372552 59372551 59372755 59372552 59372551 59372755 204 GAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGG---------------------GGGCGAGGGGGGAAGAAAAAAATAATAA--AAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG .......x:..x.x..:::...x..x.:...:....:.x.--.....x..x:..x..x:....:..:..x:.x.:x..x..x...:.---------------------...x.:.:..::.::..:...:x..x..--..:.:..:.x..x..x...::::x..:x..x:....:....x.--..x..:......x.:x....:.-----------......::... 40M2I45M21D28M2D43M2I22M11I11M 124/189 65.6% 204/94230402 0.0% 38/189 20.1% -14270318 -79960084 +3280 chr4 + 190214555 45102244 45102243 45102385 142 TTCCAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAGAGAGAGAGAGAG-AGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 8397446 8397445 8397587 8397446 8397445 8397587 142 TTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGAC--AAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAG ..::...x.:..xx.....:...x:...:....:..x--....x::::...:.x...x..:.x..-..x.....::.:.:.x.:..-.x.:...:x.x...:x:..:::...xx..:..:..:.::..x.::.::.x..:.:.. 37M2D26M1I20M1I57M 85/140 60.7% 142/94230402 0.0% 4/140 2.9% 36704798 NA +3158 chr4 + 190214555 45102253 45102252 45102328 76 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.....:x:.::... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 3990075 NA +3419 chr4 + 190214555 45102256 45102255 45102436 181 AAAGAAGAAAGAAAGAAAGAAAG------AAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGA-----GAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAG-AAAAAGAAAAGAGAG chr4 + 94230402 23740016 23740015 23740206 23740016 23740015 23740206 191 AGAGGAGATGGAAAGTAGTTGAGTAGCTCAAAAAAGGAATTACAGGAAATATAGGGAACAAGGGAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAA---AGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAG .:..:...x:.....x.:xx:..------...:..:...xx.-.:....x.x..::.:x...::.:x:......x:.....:.-----...x..x.:x.:x:..:....xx:....:x...---..x..x.::xx..x.::xx...:x...::.:..:...:.....:......:.x.-.....x:x....:.. 23M6I13M1I40M5I33M3D54M1I15M 112/178 62.9% 191/94230402 0.0% 16/178 9.0% 21362240 NA +3266 chr4 + 190214555 45102271 45102270 45102335 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAG chr4 + 94230402 43459373 43459372 43459437 43459373 43459372 43459437 65 AAATAAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAG ...x....:..:x.x.:x.:...:...:...x...x...:.x...xx.................. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 1642898 NA +3509 chr4 + 190214555 45102292 45102291 45102441 150 AAGAAAGAAAGAAAGAAAGAAAGAGAG-----------AGAGAGAGAGAGAGAAGGGGAGGGAGG------GAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGAGGAG chr4 + 94230402 2498505 2498504 2498671 2498505 2498504 2498671 167 AAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAACCCAGAGCTGGGAG ....:.x::....:.:..x..x.:.::-----------..x:..x.x::....x......x:.x:------...:x...::..:.::..x.:....:.xxxxx....::......:...:::...:.....x...:x.:.......x:.:..:xxx....xx:.... 27M11I27M6I96M 92/150 61.3% 167/94230402 0.0% 17/150 11.3% 42603787 NA +3627 chr4 + 190214555 45102303 45102302 45102444 142 AAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGAGGAGGAA chr4 + 94230402 49044652 49044651 49044787 49044652 49044651 49044787 136 AAAAGATTAAAGAGAAA-AGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG-------GGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAA ...::.xx.......:.-...:x:.....xx.....x..xx:.:.:..x.::x..x:....:x.--...x:......-------.:....:xx..........::..::x......x:..::........::.x::..x..:.. 17M1D46M2I11M7D60M 88/134 65.7% 136/94230402 0.0% 10/134 7.5% -3942349 -90288053 +3031 chr4 + 190214555 45102314 45102313 45102368 55 GAGAGAGAGAGAGAGAGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 32265571 32265570 32265625 32265571 32265570 32265625 55 GAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA ..::..:::.:......:::...:..........:...:....:x..x.:..... 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 12836743 NA +3089 chr4 + 190214555 45102327 45102326 45102446 120 AGAGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAA-----------------AGAAAAGAGAGAGGAGGAAGG chr4 + 94230402 1317349 1317348 1317485 1317349 1317348 1317485 137 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGG ....x::..:.x..:....x.x:x...xx.:::.x::.......xxxx..:.x..x.::.x.::.xx.:..:.....:.....:....:.....::...-----------------:....x...xx......:... 99M17I21M 76/120 63.3% 137/94230402 0.0% 17/120 14.2% 43784978 NA +3067 chr4 + 190214555 45102339 45102338 45102437 99 AGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGA chr4 + 94230402 70530552 70530551 70530650 70530552 70530551 70530650 99 AGGTAAGGGAATAGGCAGCTAAAAGTGGAAAATTGAAAGGAAGAAGAGAAACGGGCTAAAAAGAAGTAAAAAGAAAAAGGTGAGAAAGGTAAAGAGTGA ...x.:..:::x.:.x.:xx..:.:x.:..:.xx.....:.....:::..:x::.xx.:......:x............:x:::...:.x......x.. 99M 60/99 60.6% 99/94230402 0.0% 0/99 0.0% -25428213 -68802189 +3078 chr4 + 190214555 45102349 45102348 45102444 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGAGGAGGAA chr4 + 94230402 51148380 51148379 51148475 51148380 51148379 51148475 96 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA .......::.:xx.x...:...:...:.........x.:.::xxx.:.:xx::..x.:..x.x::.::.x:...:...:.....::.:......:. 96M 58/96 60.4% 96/94230402 0.0% 0/96 0.0% -6046031 -88184371 +3097 chr4 + 190214555 45102352 45102351 45102433 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:..x.x.:....x:..::..:.x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 3990174 NA +3236 chr4 + 190214555 45119691 45119690 45119771 81 TTCTGAA-AGAAGATAATAGCAACACTGTTTTGTTGTTGTTTTTTGTTTGTTTGTTTGTTGTGAAGGGAGGAA--ACTATTCTT chr4 + 94230402 14993117 14993116 14993200 14993117 14993116 14993200 84 TTCTGCATAGACGATAGACTAAAAGCTGTTTAATGGTAATTTTTTGTTTGTTTGTTTGTTTTGAAAGAAAGAATTGCTATTTTT .....x.-...x....:xxxx..x:......x:.x..x:.....................x....:.:.:...--:.....:.. 7M1I65M2I9M 61/81 75.3% 84/94230402 0.0% 3/81 3.7% 30126574 NA +3193 chr4 + 190214555 45157017 45157016 45157087 71 CACCTATAATCCCAGCTACTCAAGAGGCTGAGGCGGGAAAATCACTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:..:.:.........::.:........x.xx.x:..x.........:...:..x:xx:..:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -30876190 -63354212 +3085 chr4 + 190214555 45254195 45254194 45254239 45 TTAAAAAACAAAACAAACAAACAAAAAACAAAAACAAAAACAAAC chr4 + 94230402 59146012 59146011 59146056 59146012 59146011 59146056 45 TTAAAAAACAAAACAAACAAATCAGTAACAACAACAACAACAAAC .....................:x.:x.....x.....x....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -13891817 -80338585 +3214 chr4 + 190214555 45282788 45282787 45282852 65 CCTCTAGAAAGCAGAAAAGGCAAAAAAAAAAAAAAAAAAAAAATGTGATTGCT--------GCTACAGCCTTC chr4 + 94230402 48753925 48753924 48753997 48753925 48753924 48753997 73 CTTCTGACAAGTTCAAAAGGCAAAAAAAAAAAAAAAAAAACACTGTGATCTCTCTACTGGAAATACAGCCTTC .:...::x...:xx..........................x.x......:x..--------:x.......... 53M8I12M 52/65 80.0% 73/94230402 0.0% 8/65 12.3% -3471137 -90759265 +3598 chr4 + 190214555 45291227 45291226 45291304 78 TCTGTTTTTTTTAATTGTTGTTGTTGTTGTTTGTTTGTTTGATAGATTTTTCTCTATCCTTTCA----------TTTTGAGTCTATGG chr4 + 94230402 73452901 73452900 73452988 73452901 73452900 73452988 88 TCTGCTTTCTTCTGTTTTTGTTGTTGTTGTTTGTTTGATTGATTGATTTGTTTTGCTTTCTTCAAGATTTGGCTTCTTAAATCTATGG ....:...:..:x:..x....................x.....x.....x.:.:xx.:::....----------.:..:.:....... 64M10I14M 59/78 75.6% 88/94230402 0.0% 10/78 12.8% -28161674 -66068728 +3066 chr4 + 190214555 45325612 45325611 45325667 56 TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCATGTGTGTGTGTGTGTATATGTGTG chr4 + 94230402 5214261 5214260 5214316 5214261 5214260 5214316 56 TACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .::....:..::.x..::........:..:x.:.........::..:.x....... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 40111351 NA +3201 chr4 + 190214555 45334089 45334088 45334130 42 TGGTAGCTTTTTGGGTTTTTTTTTTTTTCTTTTCTCTTTTTT chr4 + 94230402 38383716 38383715 38383757 38383716 38383715 38383757 42 TGGTGGATTTTTGGGTTTTTTTTTTTTTTTTTCCTCTTTCTT ....:.x.....................:...:......:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 6950373 NA +3072 chr4 + 190214555 45338614 45338613 45338681 68 TTAATTGTTTACATGTATGTTCATCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 7136641 7136640 7136708 7136641 7136640 7136708 68 TTAGTTATCCATATGCATTTCTGTCTCTAAACTCCAATTTCTTTTCCGTTTTTTTTTTTTTTTTTGAG ...:..:.::.:...:..x.:::.....xxx..::xx...:....::x.................... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 38201973 NA +3082 chr4 + 190214555 45375859 45375858 45375914 56 ATTTCTGGGTTTGGTATTCTATTCCATTGGTCTATATTTACCCCATAACACACCTT chr4 + 94230402 85593499 85593498 85593554 85593499 85593498 85593554 56 ATTTGTGAGTTTGGTTTTTTTTTCCATTGGTTTGTTTTTAAATCACAACACATCTT ....x..:.......x..:.x..........:.:.x....xx:..:......:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -40217640 -54012762 +3115 chr4 + 190214555 45400063 45400062 45400121 59 TTAAAACATTGTTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC chr4 + 94230402 8907348 8907347 8907406 8907348 8907347 8907406 59 TTAGAACGTTTCTTTTATTAAAAAAGAAAAAAAGATTGAGAGAAAAAAGAAAATAAAGC ...:...:..x:....:.x......:.......:.xx:.:.:......:....x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 36492715 NA +3258 chr4 + 190214555 45405122 45405121 45405182 61 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:.........:.::........x.xx.x...xx:.x.........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -30628082 -63602320 +3327 chr4 + 190214555 45417431 45417430 45417575 145 ATCCAGGTTGTTGTGAATGCCATTATTTCATTCATTTTTAGGCTGAGTAGTATTTCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAATTTTCTTTAT chr4 + 94230402 39131710 39131709 39131828 39131710 39131709 39131828 119 ATGCAGATTGCCTTAAATCCCATCAACCCATTCAA--------------------------GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTAT ..x...:...::x.:...x....:.x::......x--------------------------.:..x...::.::x......x...x.x.......:x.....::.:.:.x..x..::..x...x:.......:..:x:..x:... 35M26D84M 78/119 65.5% 119/94230402 0.0% 26/119 21.8% 6285721 NA +3237 chr4 + 190214555 45417452 45417451 45417564 113 ATTATTTCATTCATTTTTAGGCTGAGTAGTATTTCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834491 85834490 85834602 85834491 85834490 85834602 112 ATTAATACCTACCTTATTTGCCAGAAT-GTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ....x.x.x.x.x..x..x.x.x..:.-...x..::x.x.x.x.:.x::.x.....x.................:.xx:...:x::...:....:..x...:..:.x...::. 27M1D85M 73/112 65.2% 112/94230402 0.0% 1/112 0.9% -40417039 -53813363 +3009 chr4 + 190214555 45417487 45417486 45417560 74 ATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 79265516 79265515 79265589 79265516 79265515 79265589 74 ACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .::.............::........xx...:.:.:::.::::.....:.:.:::.x.:....x.:.:.x:.:. 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% -33848029 -60382373 +3146 chr4 + 190214555 45417490 45417489 45417560 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 39131747 39131746 39131817 39131747 39131746 39131817 71 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x...::.::x......x...x.x.......:x.....::.....x..x..::..x...x:.......:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 6285743 NA +3015 chr4 + 190214555 45417492 45417491 45417562 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATA chr4 + 94230402 39131747 39131746 39131817 39131747 39131746 39131817 71 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x...::.::x......x...x.x.......:x.....::...:.x..x..::..x...x:.......:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 6285745 NA +3196 chr4 + 190214555 45417493 45417492 45417564 72 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834612 85834541 85834540 85834612 72 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .....x.................:.xx:...:x.::.:::.:.:..x...:..:.x...::.:.:...:.:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -40417048 -53813354 +3224 chr4 + 190214555 45417505 45417504 45417563 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....x.................:.xx:....x::...:....:..x...:..:.x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -40417036 -53813366 +3255 chr4 + 190214555 45436223 45436222 45436332 110 TTGAAGACAAGAACAATTGTATTCAACTGATAGCTCAATTGATTTCTTGGAGTAGTTGAGACACTGAATTTTGATATATATATATATATACACACACATATACACACACA chr4 + 94230402 4409023 4409022 4409121 4409023 4409022 4409121 99 TTGAAGGCAGGAGAGATTATGTT---------GCTATTTTTGTTGTCTAAAGC--TAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ......:..:..:x:...:.:..---------...xxx..x:..x::.::..:--.x:...x.:...:x:.xx.:.......................x.x......... 23M9D21M2D55M 69/99 69.7% 99/94230402 0.0% 11/99 11.1% 41027200 NA +3035 chr4 + 190214555 45439026 45439025 45439130 105 AAAAATAAAATATATATATATATATATTATATATATATATATATATATATATATATATATATATATATATATATATATATCTTTTTCCTTTTGTACAAGCCACAG chr4 + 94230402 50293963 50293962 50294067 50293963 50293962 50294067 105 AAAGATGGAATTTCTATAGGTATTTTAGGTATTTATAGGCATATAAATCTATATAAATATAGGTATTTATAGATATTTTTAAATTTGAGTTAGTTCATGCTACAG ...:..::...x.x....x:...x.xxx:...x....x::.....x..x......x.....x:...x....x....x.x.xxx...xxx..x..x..x..:.... 105M 70/105 66.7% 105/94230402 0.0% 0/105 0.0% -4854937 -89375465 +3043 chr4 + 190214555 45439031 45439030 45439109 79 TAAAATAT---ATATATATATATATTATATATATATATATATATATATATATATATATATATATATATATATATATATCTTT chr4 + 94230402 50293961 50293960 50294042 50293961 50293960 50294042 82 TAAAAGATGGAATTTCTATAGGTATTTTAGGTATTTATAGGCATATAAATCTATATAAATATAGGTATTTATAGATATTTTT .....x..---..x.x....x:....x..x:...x....x::.....x..x......x.....x:...x....x....:... 8M3I71M 59/79 74.7% 82/94230402 0.0% 3/79 3.8% -4854930 -89375472 +3882 chr4 + 190214555 45487541 45487540 45487746 206 TTTTTTTTTGTGTGTGTGTGTATACATATATATATATATATTAAATTCATGCGTACAGAAAAGCCCATTTTGAACAGAAGCAAACAATGCTGTTTGATATACTCTTAATATTTTATTTCAATATCA--GGCAGGC---AGTAATTTATTATTGCTTACTTAGCTAATACATTTTAAAAAGAAAAAAC--TAGTAAAAAGCACATGACATATTT chr4 + 94230402 33250995 33250994 33251197 33250995 33250994 33251197 203 TTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTA-----TTTTTTTACAAGAAAAGAATATTAATGCCCCATATTGACTTTACGTTTTATGTGCAAACCAAGGGTAAGCTTTAAAAAGTTCTCATTAGTTCTTGAAC-----CCTTTTAAAACAAGCAAACGATACCAGAAACTACATGGCATATTT ........................:..:.:........x.x.xxx.x:x..:x.x:.xx.-----:x....x.xx....:x:..:.x.:x..:::x....xxx...x.::......x.xx.x.:..--..:.:..---.:x..x..x.:...:x..x:.x.:.-----.x........x:.:x....--..x:.:...x:.....:....... 60M5D61M2I7M3I25M5D19M2I24M 128/196 65.3% 203/94230402 0.0% 17/196 8.7% 12236546 NA +3256 chr4 + 190214555 45488402 45488401 45488452 51 TACTGGTCTTTTGTTTGTTTGTTTTGTTTGTTTTTTGGTTTTTTTTTTTTT chr4 + 94230402 65365732 65365731 65365782 65365732 65365731 65365782 51 TACCGATTTTATGTTTGTTTGTTTGTTTTGTTTTCTGATTTATTTTTTTTT ...:.:.:..x.............xx........:..:...x......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -19877330 -74353072 +3166 chr4 + 190214555 45488408 45488407 45488464 57 TCTTTTGTTTGTTTGTTTTGTTTGTTTTTTGGTTTTTTTTTTTTTTTTTTTCCTTTT chr4 + 94230402 38383698 38383697 38383754 38383698 38383697 38383754 57 TTTCCTGGCTGTTTGGTTTGGTGGATTTTTGGGTTTTTTTTTTTTTTTTTCCTCTTT .:.::..x:......x....x.x.x.......x.................:.::... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 7104710 NA +3063 chr4 + 190214555 45488417 45488416 45488503 87 TGTTTGTTTTGTTTGTTTTTTGGTTTTTTTTTTTTTTTTTTTCCTTTTGAGACAGGGTTTCTCTCTGTTGCCCCAGGCTGGAGTGCA chr4 + 94230402 39677130 39677129 39677214 39677130 39677129 39677214 85 TATTTACTTTGGCTTGCTTTAGGCTTTTGTTTTTATTTTTTTCCATTTAAGACAGAGTT--CTACAGTCACCTCAAGACAGCATGCA .:...::....x:.xx:...x..:....x.....x.........x...:......:...--::x.x..::..:..:.x::.x:.... 59M2D26M 57/85 67.1% 85/94230402 0.0% 2/85 2.4% 5811287 NA +3036 chr4 + 190214555 45508035 45508034 45508104 70 TTGTTGCTTGTGTATAGAAATCCCACTATATTTGTATGTTGATTTTATATTCTATATCTTTAATGAATAT chr4 + 94230402 24237346 24237345 24237415 24237346 24237345 24237415 70 TTGTCACTTATATATATACATCTCTTGACATTTATGTCTTGGTTTTATGTTTTATAACTTTCACCGATAT ....::...:.:....x.x...:.x:x.:....:.:.x...:......:..:....x....x.:x:.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 21270689 NA +3094 chr4 + 190214555 45554135 45554134 45554209 75 AGGCTGTGCCTCCCTGTTCCGAAGATACCTGCATATATATATATATATATATATATATATATATATATATAAAGC chr4 + 94230402 28991152 28991151 28991226 28991152 28991151 28991226 75 AGGCTGTAAGGTTTTCTTCCTAAGCTTTCTGAATATTTCATTTTGTACATACATACATATATATATATATAAAGC .......:xxx:::.x....x...x.x:...x....x.xxx.x.:..:...:...:................... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 16562983 NA +3003 chr4 + 190214555 45556039 45556038 45556074 36 TTTTTTTTTTTTTTTTTGTTGTTGTTTTTGTTGTTG chr4 + 94230402 64467879 64467878 64467914 64467879 64467878 64467914 36 TTTTTTTTTTTTTTTTTGCTGTTGTTGTTGTTGTTG ..................:.......x......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -18911840 -75318562 +3342 chr4 + 190214555 45615510 45615509 45615578 69 TAGTAACTTCAAAATGTATATATATGTGTGTGTGTGTATATATATATATATATATATATATAGTTTTAT chr4 + 94230402 70094126 70094125 70094194 70094126 70094125 70094194 69 TAGTAGCTGTCAAGGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCAT .....:..x:x..:x..:..x..........x...x.:.x.:...:.....:......x.:....::.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -24478616 -69751786 +3259 chr4 + 190214555 45621873 45621872 45621930 58 GTGTGTGTGTACAGATTTGTGTGCATGTGTGTGTATACACACCTATATATATTTGTAT chr4 + 94230402 86633933 86633932 86633990 86633933 86633932 86633990 58 GTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:..:x...:.x:.....:.:....:.........:...::.:...::..:..... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -41012060 -53218342 +3307 chr4 + 190214555 45661001 45661000 45661083 83 CATGGTGGCTTGCGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCAGGAGAATCACATGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:...........::..x.....x.xx.x...x...x......::.:..x.xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -30372196 -63858206 +3008 chr4 + 190214555 45698045 45698044 45698086 42 TTATGTGGGTATATATGTATATATATATGCAAAAATAAAATA chr4 + 94230402 83331412 83331411 83331453 83331412 83331411 83331453 42 TTATGTGTGTATATGTGTATATATATATACACACATAAAATA .......x......:.............:..x.x........ 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -37633367 -56597035 +4095 chr4 + 190214555 45709035 45709034 45709140 106 TATATATATTTCTTGGTGTATATATATATATATATATATATATATGCATATACATATATGTATAAATGTGTGTGTATGTGTATGTGTGTATGTATATATACACATA chr4 + 94230402 21109196 21109195 21109301 21109196 21109195 21109301 106 TACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:..:.:.x...:x...x:::...x.....:..:x:.:.....:x.:.:...x....:....:x.:x::..:x.x.......:........x....::.::..:. 106M 68/106 64.2% 106/94230402 0.0% 0/106 0.0% 24599839 NA +3514 chr4 + 190214555 45709054 45709053 45709127 74 ATATATATATATATATATATATATATGCATATACATATATGTATAAATGTGTGTGTATGTGTATGTGTGTATGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT .:.:.:....x:.:..::.x.:.:.......:.x.x.........xx...........:..:...:::...x.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 23108856 NA +4315 chr4 + 190214555 45761270 45761269 45761444 175 AAAGTGAGATCATATCTAAAAGAAAGAAAGAGAGAAGGTAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAAAGAAGGAAGGAGAGAAAGAGAGAGAGAGAGAAAGGAAGGAAGGAGGGAAAGA-AGGAAGGGAGGGGAAAGGC chr4 + 94230402 61867105 61867104 61867263 61867105 61867104 61867263 159 AAAGGAAAAGCATGTCTAAAAGTAGAGA--------GCTAGGCGAGAAGAAATCAGAAGTGGAAGGAAGATAAGAAGGCAGGAAGAAGATGGGAGGTCTGGGCAGGAAGG---------CCCAGAGACACTGAGACAAAAGGGCAGCAGGAAAAGATATGAAGGAATGAGAAGAGC ....x:.:.x...:........x.:::.--------.x....x::....:..xx.:.::x.........:x.......x......:..:x:..::.xxx...x.:.....---------xxx.....x.xx....x.::.:..x..x...:.....-.x.....:.x.:...::.. 28M8D74M9D37M1I19M 105/158 66.5% 159/94230402 0.0% 18/158 11.4% -16105835 -78124567 +3067 chr4 + 190214555 45768105 45768104 45768144 40 ACTGATTTTTTTTGTGTTTTTTTTTTTTTGTGTGTGTGTG chr4 + 94230402 15811255 15811254 15811294 15811255 15811254 15811294 40 ATTGCTTTTGCTTGTGTTTTTTTTTTTTTGTGTGTGTGTG .:..x....x:............................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 29956850 NA +3236 chr4 + 190214555 45768111 45768110 45768164 54 TTTTTTTGTGTTTTTTTTT-TTTTGTGTGTGTGTGTGTTTTTTTTTTGAGACAGA chr4 + 94230402 83182300 83182299 83182354 83182300 83182299 83182354 55 TTTTTTCATGCTTTTTTTTGTTTTGTGTGTGTGTGTGTTCGTTCTGGGAGATAGA ......::..:........-...................:x..:.xx....:... 19M1I35M 45/54 83.3% 55/94230402 0.0% 1/54 1.9% -37414189 -56816213 +3163 chr4 + 190214555 45822927 45822926 45822990 64 TATACATGGTGTGTGTGTGTGTGTGTGTACATATATATATATGTACACACACACACACACATAA chr4 + 94230402 6083165 6083164 6083228 6083165 6083164 6083228 64 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAA ....:................:.::.::...x.:........:..:.:x.x:...:::.x.x.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 39739762 NA +3282 chr4 + 190214555 45822937 45822936 45822985 49 GTGTGTGTGTGTGTGTGTACATATATATATATGTACACACACACACACA chr4 + 94230402 68837095 68837094 68837143 68837095 68837094 68837143 49 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:...............:.:.x...:..::.:.....::...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -23014158 -71216244 +3200 chr4 + 190214555 45845791 45845790 45845862 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGCCAGGACAATTGCTTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::..........xx.xx..x::........::.:.:x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -30187415 -64042987 +3114 chr4 + 190214555 45861390 45861389 45861453 64 TCTTACTATTGTTTTTCCATAGATACTTTTTTTGTTGTTGGTGATGGTGGTGGTGTTTTTTTGT chr4 + 94230402 19090284 19090283 19090345 19090284 19090283 19090345 62 TTTTATATTTGTATTT--ATGACTAACTGTTTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTGT .:...:xx....x...--..::x..x:.x..............:...........x........ 16M2D46M 49/62 79.0% 62/94230402 0.0% 2/62 3.2% 26771106 NA +3190 chr4 + 190214555 45864283 45864282 45864328 46 TATGTAATATATATTATATTTGTGTATACACACACACACACACAAG chr4 + 94230402 30834193 30834192 30834238 30834193 30834192 30834238 46 TATACAATATGTATTATATATATATATATACACACACACACACAGG ...::.....:........x.:.:....:...............:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 15030090 NA +3094 chr4 + 190214555 45867442 45867441 45867516 75 AACACTATGTGTGTGTGTATATATATATATATATATATATATACATATACATACATATATATATATATACACAGC chr4 + 94230402 6200758 6200757 6200832 6200758 6200757 6200832 75 AATGCTATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCTGTCCACAAC ..::....x.x....::.....:.:...x...:...:.x.:.::..x.x..:.....x.....xx.:.x....:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 39666684 NA +3979 chr4 + 190214555 45870452 45870451 45870673 222 AGATGAAAAAGAAAGAAAGGAAAGAAAGCAAGAAAGAAAAAAAAGGAAGAAAAGAAAGGGAGAAAGAAAGAGAGAGTGAGAAAG----GAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAA----AGAAAAAGAAGAGAAAGAAAGAAAGAAAAAGAAAAGAAAGAAAGAGAGAAAAGATGGAACAAAATGA--AGGAAGGAAGGGAAGGAAGGAAGGAAGAAAGGAAAG chr4 + 94230402 23740016 23740015 23740247 23740016 23740015 23740247 232 AGAGGAGATGGAAAGTAGTTGAGTAGCTCAAAAAAGGAATTACAGGAAATATAGGGAACAAGGGAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAAAGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAGTAACTATGACTGCGGGAAAAGAAAAGTGGGACAAGTGACAG ...x..:.x:.....x.:xx:.:x.:xx...:....:..xx.x.....:x.x..::.:x:..::.:x.......x:x......:----...x.:x..x.:x....::..xx:::...x..:.:----..:xx..x.:.xx..:.x.:::::......:....:...:....::x.x...:...x..x...:.:.--.x..xx.x:..:..:...:::x..:.x..:x..x.. 84M4I35M4I67M2I36M 129/222 58.1% 232/94230402 0.0% 10/222 4.5% 22130436 NA +3203 chr4 + 190214555 45870464 45870463 45870585 122 AAGAAAGGAAAGAAAGCAAGAAAGAAAAAAAAGGAAGAAAAGAAAGGGAGAAAGAAAGAGAGAGTGAGAAAGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAA chr4 + 94230402 65363837 65363836 65363958 65363837 65363836 65363958 122 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAGCCAACAGAACAGAA ......x....:.x.x....:x::..:.:..:.:x.xx.......::x.:::.:..:::..:.xxx.........xx:.::.::.::x:.:...:x..x..:...x.:xx..x....x.... 122M 71/122 58.2% 122/94230402 0.0% 0/122 0.0% -19493373 -74737029 +3393 chr4 + 190214555 45870471 45870470 45870645 175 GAAAGAAAGCAAGAAAGAAAAAAAAGGAAGAAAAGAAAGGGAGAAAGAAAGAGAGAGTGAGAAAGGAAAGAAAAAGAAAGAAAG-AAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAG---------------------AAAAAGAAAAGAAAGAAAGAGAGAAAAGATGGAACAAAATGAAGGAAGGA chr4 + 94230402 5778660 5778659 5778855 5778660 5778659 5778855 196 GAAGGAAAAATAAATAAATAAGAATAGAAGAGAAGGGATGGAGAAAGACAGAAAT-GAGAGAGAAGTAAGCACACCTATTACAGAAAAGCTAATGAATATCAAAAAAACAAGGGAAAGGAAAAAGGTTAGCTATATGTATATATATTCATGATGAATGAATGACAAAGTCAAAATATGTAGTTAAATGAAAGGATGA ...:....:xx.:.x.:.x..:..x:.....:...::.x.........x...:.x-.x....:.:.x...x.x.xxx.xx.x..-....xx..x...x:xx.:.....x...:.....:..:..:.---------------------x.x:.x:..x...x..x.:..xx....x...x.::x.......:.:.x.. 55M1D28M1I41M21I50M 112/174 64.4% 196/94230402 0.0% 23/174 13.2% 40091811 NA +3392 chr4 + 190214555 45873360 45873359 45873493 134 AAATGACCACAAATAAAATCATTAAATTCAATCTAAACATTAATAATAATATAAAAAATGAAATCTTTCTCCTTCATACATTTACAAAGAGCAATC------TGCTAAAAGATAAATTCA----AATTGAACTTGCAGAATTTC chr4 + 94230402 8856310 8856309 8856453 8856310 8856309 8856453 144 AAATGTAAATTAATAAAATCATTAGATTCAATTTTAACTGCAAGATAAACATAGCTAACCAGGATTTTTTTTTTCTTGCATTTGAAAAGGAGAATCAGTAATTGTTGTAATATGAAATGACAAGGATTTCCCTTGCAGAAATTC .....xxx.:x.............:.......:.x...xx:..x.xx..:...:xx..:x.::x:...:.::...x.:.....:x....::x....------..:.:x..x..:..x.x.----:...xxx.........x... 96M6I18M4I20M 88/134 65.7% 144/94230402 0.0% 10/134 7.5% 37017050 NA +3472 chr4 + 190214555 45874547 45874546 45874616 70 TCTATGTGTGTGTGTGTGTGTGTGTGTA--TATATATATATACATATATGTATATATATACGTATATATATG chr4 + 94230402 85834545 85834544 85834616 85834545 85834544 85834616 72 TCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...:...............:.xx:....--:...:....:..x...:....x...::.:..:..:.:.:... 28M2I42M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% -39959998 -54270404 +3380 chr4 + 190214555 45874547 45874546 45874623 77 TCTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATAT chr4 + 94230402 85834539 85834538 85834615 85834539 85834538 85834615 77 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.:...x.................:.xx..:..x::........:.:x...:..:.x::.::.:.:..::.:.:.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -39959992 -54270410 +3701 chr4 + 190214555 45874547 45874546 45874626 80 TCTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATATA chr4 + 94230402 85834535 85834534 85834614 85834535 85834534 85834614 80 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .::..x.....x...............:...xx..:..x:....:..:.:..x...:.:..x...::.:::...:.:.:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -39959988 -54270414 +4010 chr4 + 190214555 45874551 45874550 45874714 164 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATATACATATATATATGTATATATATGTATACATATATATGTATACATATATATATGTATACATAT---ATACATATATGTATATATATATGTATA chr4 + 94230402 79265520 79265519 79265678 79265520 79265519 79265678 159 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC-------TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA ............::........xx.:......:.....::.:..:.:.:::.x..:...x.:.:.x:.:.-.:.:x:x......x...:.:-------.x.:.x.x.x.:x..:....x..::..x.x.:..x:.::---::..x.:...x....:..x....x:.. 70M1D20M7D39M3I27M 99/156 63.5% 159/94230402 0.0% 11/156 7.1% -33390969 -60839433 +3704 chr4 + 190214555 45874551 45874550 45874625 75 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...................xx..:..x::.:.:.......x...:..::x...::.:.::..:.:.:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -39959990 -54270412 +3393 chr4 + 190214555 45874552 45874551 45874669 118 GTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATATACATATATATATGTATATATATGTATACATATATATGTATACAT chr4 + 94230402 89812946 89812945 89813060 89812946 89812945 89813060 115 GTTTATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..x.:.:...xx....x....---::.....x...x....:.......x..x.:.:x.xx...::.:.::.x.:x.x:..:::.....x:x.:.:...:.:::.........x..x.. 21M3D94M 73/115 63.5% 115/94230402 0.0% 3/115 2.6% -43938394 -50292008 +3553 chr4 + 190214555 45874555 45874554 45874629 75 TGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATATACAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.............:.:...xx..:..x::...::...:..x....:.:.x...::::.:...:.:.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -39959986 -54270416 +3068 chr4 + 190214555 45874565 45874564 45874625 61 TGTGTGTGTATATATATATATACATATATGTATATATATACGTATATATATGTATATATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.....::...:...:....:.:.....:.:...x.x:..:..::...:....... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -9819883 -84410519 +3444 chr4 + 190214555 45874582 45874581 45874763 182 ATATACATATATGTATATATATACGTATATATATGTATATATATACATATATATATGTATATATATGTATACATATATATGTATACATATATATATGTATACATATATACATATATGTATATATATATGTATATATTACCAAAACAC---------------GTAACAGCAATTTTTTGTTCAGAGACAAGCATGAA chr4 + 94230402 91738174 91738173 91738362 91738174 91738173 91738362 189 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT-------TTTATACTTCAAATACTCATTTATGGTCTCTTGGCAAAAGCATTCCTCTGTCTAG-GACAAACTTCAA .....x....:.x.x:x...:xxx.:.....x..:.:.x.x:x.:::x.xx.....x...::........xx...x.x.x..x....x.x...:..::.x.x.:........:x:.:.....-------.x....:.x.x..x..x.---------------.:..x....x.::.:...::..-.....:.x.x.. 122M7D18M15I22M1D12M 112/174 64.4% 189/94230402 0.0% 23/174 13.2% -45863592 -48366810 +3566 chr4 + 190214555 45874582 45874581 45874763 182 ATATACATATATGTATATATATACGTATATATATGTATATATATACATATATATATGTATATATATGTATACATATATATGTATACATATATATATGTATACATATATACATATATGTATATATATATGTATATATTACCAAAACAC---------------GTAACAGCAATTTTTTGTTCAGAGACAAGCATGAA chr4 + 94230402 91734576 91734575 91734764 91734576 91734575 91734764 189 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT-------TTTATACTTCAAATACTCATTTATGGTCTCTTGGCAAAAGCATTCCTCTGTCTAG-GACAAACTTCAA .....x....:.x.x:x...:xxx.:.....x..:.:.x.x:x..::x.xx.....x...::........xx...x.x.x..x....x.x...:..::.x.x.:........:x:.:.....-------.x....:.x.x..x..x.---------------.:..x....x.::.:...::..-.....:.x.x.. 122M7D18M15I22M1D12M 113/174 64.9% 189/94230402 0.0% 23/174 13.2% -45859994 -48370408 +3075 chr4 + 190214555 45897789 45897788 45897841 53 ATTAAATTAAAAACTTTCTTTCTTTTTTTTTTTTTACTTAAAGGAAGCACTTT chr4 + 94230402 38310083 38310082 38310135 38310083 38310082 38310135 53 ATTAAAATCAAGACTTTTTTTTTCTTTTTTTTTTTTCATAAAGGAAATAATTT ......x.x..:.....:...:.:...........x.x........::.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 7587706 NA +3252 chr4 + 190214555 45911818 45911817 45911881 64 TTGGTTTATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTATTGACCTTTAGGAAAA chr4 + 94230402 92218272 92218271 92218335 92218272 92218271 92218335 64 TTGATTCATTTTCTTTTTTTTTTTTTTCACTTTTTATTTTAATTTTCATTGGTTTTGAGAAGAA ...:..:..xx.:..............:x:.....x....x.....:....:::..x..:.:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -46306454 -47923948 +4219 chr4 + 190214555 45940156 45940155 45940359 204 GGCATTGCAATATGTAATATAAATGTGAAAAGAAAAGAGAGAGAAAGAGAAAGAAA-----------TAGAGAAAAAATGAAAGAAAGAAAGGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----------------------AGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAGGGAGAAAGAGAGAGAAAGGAAGGAAGGAAGAGGGAGAAAGAGTCTCC chr4 + 94230402 25190301 25190300 25190538 25190301 25190300 25190538 238 GGTATCTAAATAGTTGTTATTGATTTTAAAGCAAAGATGAGAGAGAAAAGAAAAAAATCAAATGTGGTAGAGAAGAAATGTAAGAGAGAATAGACAGAGATGAGAGGTATAAAACAGTAGAAAAAGGAGAGAAGAATCTCTCTTTTTTTGATGTTTCTTGATTAGGAGGTGAAAATTAAAGTAAGGAAATAGAAGAGTGGGAGagaatcacagaattgtaggggttggaagggacctc ..:..:xx....xx.:x...x:..x.x...:x...::x......:.:.::..:...-----------.......:.....x....:....x:..x...:.x..:..:x.x...:x.:x.:.:....:.:::.....-----------------------::xx..:.:.x.::..xx....x...:..:x:.:...:x.:.......xx:x..:.xx.x..:..xx.:...:.x.::. 56M11I69M23I79M 124/204 60.8% 238/94230402 0.0% 34/204 16.7% 20749855 NA +3375 chr4 + 190214555 45940170 45940169 45940312 143 TAATATAAATGTGAAAAGAAAA----GAGAGAGAAAGAGAAAGAAATAGAGAAAAAATGAAAGAAAGAAAGGAAAGAAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAAG-AAAGAGGGAAAGAAAGAAAGAAAGAG chr4 + 94230402 7358232 7358231 7358381 7358232 7358231 7358381 150 TAATGTTGTTTTGAAAAGGAGACCATGGCTGAGATGGGGAGA-AAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGACCTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAAATGAATAG ....:.x:x.x.......:.:.----.:xx....x:.:..:.-...x...::::.xx...:...:..x.....:....:...:.....:.x:..:..:.---..:...:.xx.:.:xx....x.-.:.x..:::.:...:....x:..x.. 22M4I16M1D56M3I22M1I26M 91/142 64.1% 150/94230402 0.0% 9/142 6.3% 38581938 NA +4049 chr4 + 190214555 45940180 45940179 45940290 111 GTGAAAAGAAAAGAGAGAGAAAGAGAAAGAAATAGAGAAAAAATGAAAGAAAGAAAGGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 49044705 49044704 49044814 49044705 49044704 49044814 110 GTGAGAAGCACTAAGTGAGAAAGGGAA-GAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG ....:...x.xx:..x.......:...-..:x..:.....:..x:..:.x:.:...x................x...:x.:.:..xx:.::xx..:....::....:x:.. 27M1D83M 74/110 67.3% 110/94230402 0.0% 1/110 0.9% -3104525 -91125877 +3243 chr4 + 190214555 45940367 45940366 45940462 96 GGAAGGGAGGGAGGAGGGAGGAAGGAAGGGAGGGAGGGAAGGAAGGAAGGAAGAAAAGAAG------------------GGGGAAGGAAGGGATAAAATGTGCAGAGAGAGAAG chr4 + 94230402 1500702 1500701 1500814 1500702 1500701 1500814 113 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaa-atggaaaaaaaaaag .....:..:.:.:.:x..:..:.:....x.....:::.:.....::..:x.:......:..------------------......x:....:.x:...-:..x.:.:.:.:... 61M18I19M1D15M 64/95 67.4% 113/94230402 0.0% 19/95 20.0% 44439665 NA +3096 chr4 + 190214555 45979282 45979281 45979338 57 TCTGTCTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAAAAAAGAAAAG chr4 + 94230402 89181139 89181138 89181195 89181139 89181138 89181195 57 TTTGTTTTAGAAAGGAAAGAGAAATGGGAAAAAAAATAGGAAGAAAAAAAAGAGAAG .:...:.:.:...::...:.:...x:.:....:...x..:..:..........:... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -43201857 -51028545 +3296 chr4 + 190214555 45994423 45994422 45994548 126 CATAAATATATGTGTGTGTGCGTGTGTATGTGTATATATATATACATATATATACACACACATATATATATATACACACACATATATTTACCT----AATATTCTAATGTACAATGATCTAAATTCTACT chr4 + 94230402 85834537 85834536 85834653 85834537 85834536 85834653 117 CATTTGTGTCTGTGTGTGTGTGTGTGTAT---TA---ATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG---GCCTGGGGAATTTTCTTCTGTAT----GTACAAATTCCACT ...xx:.:.x..........:........---..---..:..x:....:....::.x.:....:.x...::.:...:.....:..:---:...----...x....xx....:----:.x:......:... 29M3D2M3D49M3D4M4I15M4D14M 82/113 72.6% 117/94230402 0.0% 17/113 15.0% -39840114 -54390288 +3153 chr4 + 190214555 45994428 45994427 45994500 73 ATATATGTGTGTGTGCGTGTGTATGTGTATATATATATACATATATATACACACACATATATATATATACACA chr4 + 94230402 39937176 39937175 39937248 39937176 39937175 39937248 73 ATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA ......:.......:....x..:...::xxx.x..:....xxx:...:...:...:.....:...x..:::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 6057252 NA +3473 chr4 + 190214555 45994438 45994437 45994493 56 GTGTGCGTGTGTATGTGTATATATATATACATATATATACACACACATATATATAT chr4 + 94230402 68837095 68837094 68837150 68837095 68837094 68837150 56 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ............:......:.:.:.x.......:...:...::....:..x.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -22842657 -71387745 +3606 chr4 + 190214555 46026775 46026774 46026845 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x::.........:....x.xx:..:..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -30006432 -64223970 +3523 chr4 + 190214555 46048583 46048582 46048707 125 ACTGGA-AAGAAGGAAGGAAGGAAGGAAGGAGAAGGGAAGGGAAGCGAAGGGAAGGAAAGGGAGGAAAGGAAGGAAAGAAAGAAGGAAGGAAG------GAAGGAAAGGGAAGGGAGAAAGGAAAAGCAAGG chr4 + 94230402 12768612 12768611 12768743 12768612 12768611 12768743 132 ACTAGACAAGAAGGGGGCAAGAAGAGAAGGGGGAGGGAAGGCACAGCAAGAAGTGGAATGGATGACATTTAATGAAGGAAACATGGTGAGAAGTCAGGAGAAAAAAAGAAAAGGAAGAATTAAAAACCTGGG ...:..-.......::.x...:.::.....:.:........x.x:xx...:::x....x..:x.:x.xxx..x...:....x.x..x::....------...::....::....:....xx:....x.x:.. 6M1I86M6I33M 81/125 64.8% 132/94230402 0.0% 7/125 5.6% 33279971 NA +3034 chr4 + 190214555 46056105 46056104 46056174 70 AAAAAAAAAAAAAAGAAAGGAAAAAAAAAAAAATAAATAAATAAATTAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 5781984 5781983 5782053 5781984 5781983 5782053 70 AGAAAGTGACAAAAGAAAGGAGACAGAAATGAAAAAATAGGTATGTTAGAAAAAAATATGAGAAAACAAA .:...:x:.x...........:.x.:...x:..x.....::..x:...:.......x.x:.:....x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 40274121 NA +5771 chr4 + 190214555 46058209 46058208 46058343 135 TGTCATACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAA chr4 + 94230402 45317979 45317978 45318113 45317979 45317978 45318113 135 TGTTATGCCTAAAGCCACTCTGGCTGGAGCTGCATCCATATTGATCCAAAATGACACCCAGGAGAGAATGACTATCAAAAGACTTGGTATGTACATCTGGATGAGATAGTAACCCATCTGTCTCTCGAGGTGAAA ...:..:..:..x.x:::...x..x..x:.......:x.............x........:..:....::...:...:..x:.x...x.....x:....:..::x:x.:..x.....::x...x::x....x... 135M 92/135 68.1% 135/94230402 0.0% 0/135 0.0% 740230 NA +4914 chr4 + 190214555 46058214 46058213 46058345 132 TACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAAAA chr4 + 94230402 10740647 10740646 10740777 10740647 10740646 10740777 131 TACCCAGTGCCACTCGTGCAGCAGAAGCATCGTAATTGATCCAAAAAGACACCCAGGACAGAATGGTGATGAGGATAGATGGCATGTAAGTCTGCAGGATGAAGTAACCAATGTTCCT-CTTAATTCGGAAA ......::.x:::..x.....xx:xx.....x.x.....................:..x....::::x:.x..:..:x....x.....:.....x.x::....:..x..x..x:.:..-..:.:x..::... 118M1D13M 88/131 67.2% 131/94230402 0.0% 1/131 0.8% 35317567 NA +3558 chr4 + 190214555 46066870 46066869 46066931 62 GTGTGCGTGTATATATGTGTGTGTATATATGTGTGTGTATGTATGTTTGCATGTGTATGTAT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:.:.:...x:...:...x......:...:........:..::....:...::.x..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -40567059 -53663343 +3155 chr4 + 190214555 46078491 46078490 46078562 72 GCAGGGAGAAAAAGAGAGGGTGAGAAAGAGATCAGCCTATGGAATGCCGGAACCAATTGCATGAACCACCCT chr4 + 94230402 55973782 55973781 55973853 55973782 55973781 55973853 72 GCAAATAGAAAAAGAGAAGATGAGAACAAGATCAATGTATTGAGTACCAGAGTCAGTCTTACAACCCACTTT ...::x...........:.:......x:......::x...x..:.:..:..::..:.:x:.::.x....::. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -9895291 -84335111 +3065 chr4 + 190214555 46086862 46086861 46086910 49 GAATATTTTCTTTTATTGTGAAAGCAAGTTTTTGTTTTGTTTTGTTTTT chr4 + 94230402 77513576 77513575 77513624 77513576 77513575 77513624 49 GAGTGTTTTTTTTTTTAATGTAAACACGTTTTTGTTTTGTTTTGTTTTT ..:.:....:....x.x:..x..:..x...................... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -31426714 -62803688 +3726 chr4 + 190214555 46117581 46117580 46117677 97 TGTCTCTCTTTGTCTCTCTCTCTCTCTCTCTCTATATATATATACACATATGTATACATATATACATATATAT-GTATATACGTATATAGCTGTATAT chr4 + 94230402 60831528 60831527 60831623 60831528 60831527 60831623 96 TATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTG--TGTATAT .:...x...:...............x.x.x.x...:.:....:.....:::::.:x:x..x......x.....-..x.:.:..:..:.:--....... 73M1I15M2D7M 68/95 71.6% 96/94230402 0.0% 3/95 3.2% -14713947 -79516455 +3298 chr4 + 190214555 46117585 46117584 46117679 95 TCTCTTTGTCTCTCTCTCTCTCTCTCTCTATATATATATACACATATGTATACATATATACATATATATGTATATACGTATATAGCTGTATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-GTCTGTGCGCATGTGTGTATAT ...x.:.x.x.............x.x.x.....:.:........:.:.:.:..x.x..x.:.:..x...:.:-:.x:..::::.xx...:..... 72M1D22M 63/94 67.0% 94/94230402 0.0% 1/94 1.1% -14713945 -79516457 +3171 chr4 + 190214555 46117587 46117586 46117657 71 TCTTTGTCTCTCTCTCTCTCTCTCTCTATATATATATACACATATGTATACATATATACATATATATGTAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.x...x.............x.x.......:.:..:...:.:::::...:x.x..x...:..x.:... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -14713943 -79516459 +3373 chr4 + 190214555 46117589 46117588 46117694 106 TTTGTCTCTCTCTCTCTCTCTCTCTATATATATATACACATATGTATACATATATACATATATATGTATATACGTATATAGCTGTATATATATACACATGTATATA chr4 + 94230402 60831530 60831529 60831620 60831530 60831529 60831620 91 TCTATCTCTGTCTCTCTCTCTCTGTGTATAT--------ATGTGTATACACACACGCACACTTCTAAATACATTTATATGG-------TCTGTGCGCATGTGTGTA .:.:.....x.............x.:.....--------..:........:.:.::..:.:x.x.:x...:.:x.....:.-------.x.:.:.:.....:.:.. 31M8D42M7D18M 65/91 71.4% 91/94230402 0.0% 15/91 16.5% -14713941 -79516461 +3001 chr4 + 190214555 46117591 46117590 46117668 78 TGTCTCTCTCTCTCTCTCTCTCTATATATATATACACATATGTATACATATATACATATATATGTATATACGTATATA chr4 + 94230402 60831528 60831527 60831599 60831528 60831527 60831599 72 TATCTATCTCTGTCTCTCTCTCTCTGTGTAT------ATATGTGTATACACACACGCACACTTCTAAATACATTTATA .:...x.....x...........x.:.:...------......:..:.:.:.:..::.:.:x.x..x....:.x.... 31M6D41M 52/72 72.2% 72/94230402 0.0% 6/72 8.3% -14713937 -79516465 +3316 chr4 + 190214555 46117696 46117695 46117779 84 CTGTAT-ATATACATACATGTATATACATATACATATATACATATAC----------ACATATACATACATGTATATACATATACATATATACAT chr4 + 94230402 29286185 29286184 29286279 29286185 29286184 29286279 95 CTATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT ..:...-...........:.:.x.x:........x...x.x.x....----------.:.........:x.....x..:x.....:...x..::. 6M1I40M10I38M 64/84 76.2% 95/94230402 0.0% 11/84 13.1% 16831511 NA +3069 chr4 + 190214555 46117730 46117729 46117804 75 ATATACATATACACATATACATACATGTATATACATATACATATATACATACATGTATATACATATATACATATG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:......x.....::.x.:.....:...:.x.x...::.....x::.:::.......:...::.:::.x:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 23517532 NA +3219 chr4 + 190214555 46117764 46117763 46117838 75 ATATACATATATACATACATGTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:......x:....:..x::.:..:....:.x.x.........:x.....:.x.....:...::.:::.x:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 23517566 NA +3385 chr4 + 190214555 46117777 46117776 46117844 68 CATACATGTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .........:..:.::.:...:x::.::.:.x.....:.:...............:xxx..:...... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 54479 NA +3330 chr4 + 190214555 46117785 46117784 46117895 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTATCTATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x.....:::.:.x..... 81M3I30M 72/111 64.9% 114/94230402 0.0% 3/111 2.7% -30259074 -63971328 +3008 chr4 + 190214555 46117794 46117793 46117889 96 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTAT chr4 + 94230402 91738200 91738199 91738295 91738200 91738199 91738295 96 ATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x....x... 96M 63/96 65.6% 96/94230402 0.0% 0/96 0.0% -45620406 -48609996 +3281 chr4 + 190214555 46117802 46117801 46117923 122 ATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTAT chr4 + 94230402 91738174 91738173 91738295 91738174 91738173 91738295 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..:..x.:....x.x::...:xxx::.....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x....x... 122M 76/122 62.3% 122/94230402 0.0% 0/122 0.0% -45620372 -48610030 +3330 chr4 + 190214555 46117819 46117818 46117929 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTATCTATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x.....:::.:.x..... 81M3I30M 72/111 64.9% 114/94230402 0.0% 3/111 2.7% -30259040 -63971362 +3281 chr4 + 190214555 46117836 46117835 46117957 122 ATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTAT chr4 + 94230402 91738174 91738173 91738295 91738174 91738173 91738295 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..:..x.:....x.x::...:xxx::.....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x....x... 122M 76/122 62.3% 122/94230402 0.0% 0/122 0.0% -45620338 -48610064 +3330 chr4 + 190214555 46117853 46117852 46117963 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTATCTATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x.....:::.:.x..... 81M3I30M 72/111 64.9% 114/94230402 0.0% 3/111 2.7% -30259006 -63971396 +3281 chr4 + 190214555 46117870 46117869 46117991 122 ATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTAT chr4 + 94230402 91738174 91738173 91738295 91738174 91738173 91738295 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..:..x.:....x.x::...:xxx::.....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x....x... 122M 76/122 62.3% 122/94230402 0.0% 0/122 0.0% -45620304 -48610098 +3330 chr4 + 190214555 46117887 46117886 46117997 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTATCTATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x.....:::.:.x..... 81M3I30M 72/111 64.9% 114/94230402 0.0% 3/111 2.7% -30258972 -63971430 +3281 chr4 + 190214555 46117904 46117903 46118025 122 ATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTAT chr4 + 94230402 91738174 91738173 91738295 91738174 91738173 91738295 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..:..x.:....x.x::...:xxx::.....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x....x... 122M 76/122 62.3% 122/94230402 0.0% 0/122 0.0% -45620270 -48610132 +3330 chr4 + 190214555 46117921 46117920 46118031 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTATCTATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x.....:::.:.x..... 81M3I30M 72/111 64.9% 114/94230402 0.0% 3/111 2.7% -30258938 -63971464 +3242 chr4 + 190214555 46117938 46117937 46118059 122 ATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTGTATGT chr4 + 94230402 91738174 91738173 91738295 91738174 91738173 91738295 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..:..x.:....x.x::...:xxx::.....x......x.x.x....x.x:.....x:..::...::...xx...x.x:x..x.x:.x.x.:.:...:.x.x.::........x..:...:. 122M 75/122 61.5% 122/94230402 0.0% 0/122 0.0% -45620236 -48610166 +3500 chr4 + 190214555 46117955 46117954 46118065 111 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTATCTATATACATATAT---ACATATGTATACATGTGTGTATGTATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:...::x....x...x...x---.x..:..:x.x:x......:x...x..... 81M3I30M 74/111 66.7% 114/94230402 0.0% 3/111 2.7% -30258904 -63971498 +3179 chr4 + 190214555 46117989 46117988 46118067 79 TATATACATATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTGTATGTATACATAT chr4 + 94230402 76376859 76376858 76376937 76376859 76376858 76376937 79 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGAT .::....x.x.x........:.x.x..:::.:.x.::.....x.xx...x.:.........:....:..:..x...x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -30258870 -63971532 +3098 chr4 + 190214555 46118049 46118048 46118090 42 TGTGTGTATGTATACATATGTGTGTGTATATATATACATATG chr4 + 94230402 48958675 48958674 48958716 48958675 48958674 48958716 42 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATG .......x...........:.:.....:........x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -2840626 -91389776 +3104 chr4 + 190214555 46118062 46118061 46118133 72 ACATATGTGTGTGTATATATATACATATGTATACATATGTGTGTATATATACATATATACGTGTGTGTGTGT chr4 + 94230402 55694437 55694436 55694508 55694437 55694436 55694508 72 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x...:x:x...x:x.:...:....::..:....:.....:.:.:...x.x:..:.........:.:.:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -9576375 -84654027 +3275 chr4 + 190214555 46118068 46118067 46118130 63 GTGTGTGTATATATATACATATGTATACATATGTGTGTATATATACATATATACGTGTGTGTG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:...::..x:....::.x.........::...........:.:x.:...:.:.x...:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -40515861 -53714541 +3134 chr4 + 190214555 46178448 46178447 46178534 87 ATATATATATACACACACACATATATATACACACACATATACACACACACACACACACACATATA--------------TATATATATGCATCCAATACAG chr4 + 94230402 54963196 54963195 54963296 54963196 54963195 54963296 101 ATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATGGAACAACTGCAG ....x:...:.x.::.....x......:.........xx:..:::.:.x..:.......:x....--------------..:...:...x.x.x.x.:... 65M14I22M 61/87 70.1% 101/94230402 0.0% 14/87 16.1% -8784748 -85445654 +3243 chr4 + 190214555 46187991 46187990 46188054 64 AAAAAAAAATATATATATATATATACACACACACATATATATGTATTGTATATGTATATATATA chr4 + 94230402 6841116 6841115 6841179 6841116 6841115 6841179 64 AAAAAATTGTGCATATACATATATTCATACTTACATATATATAAATTGTGTAAGTACATACACA ......xx:.::.....:......x..:..x:..........:x.....:..x...:...:.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 39346875 NA +3042 chr4 + 190214555 46188077 46188076 46188144 68 CATATATATGTATATATATGTATACATACATACATATATGTATATATACATACATATATATGTATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:..:....:..:.:.:.:x:..:.::.x...:.....x..........:..:xxx..:....:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 124779 NA +3176 chr4 + 190214555 46188115 46188114 46188169 55 TGTATATATACATACATATATATGTATATATATACATATATATGTATGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .....::.........:..:.:.....:.:...x.x:..:..:..:...:..... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -9506339 -84724063 +3045 chr4 + 190214555 46188119 46188118 46188173 55 TATATACATACATATATATGTATATATATACATATATATGTATGTGTATATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:...:........:.:....:.:...:.::..x:x:.....:....:....... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -9506335 -84724067 +3187 chr4 + 190214555 46188124 46188123 46188215 92 ACATACATATATATGTATATATATACATATATATGTATGTGTATATATATGTGTATATATGTGCATGTGTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:...x...x......:.....x..x..::x.xx:..::...::.x.:x:x::.:::.....x.x.............:.:.:...x..x.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% -43624845 -50605557 +3150 chr4 + 190214555 46188136 46188135 46188230 95 ATGTATATATATACATATATATGTATGTGT--------ATATATATGTGTATATATGTGCATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGGGAATA chr4 + 94230402 5214218 5214217 5214320 5214218 5214217 5214320 103 ATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ...x::.:::..x.:.:.:.::.:.x....--------.:..x..:......::..x............:.::x::........::..::.x..:..x.x.:. 30M8I65M 60/95 63.2% 103/94230402 0.0% 8/95 8.4% 40973918 NA +3278 chr4 + 190214555 46188144 46188143 46188222 79 ATATACATATATATGTATGTGTATATATATGTGTATATATGTGCA----------TGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 89812969 89812968 89813057 89812969 89812968 89813057 89 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA .....x...x......:.:.:.x..x..::x.xx...:.......----------:..:...x:x...................:.x.. 45M10I34M 59/79 74.7% 89/94230402 0.0% 10/79 12.7% -43624825 -50605577 +3193 chr4 + 190214555 46188170 46188169 46188230 61 ATATGTGTATATATGTGCATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGGGAATA chr4 + 94230402 46063299 46063298 46063359 46063299 46063298 46063359 61 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATA ...::...:..:.....:...x.::::...x::...:...x......:........x.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 124871 NA +3304 chr4 + 190214555 46188177 46188176 46188264 88 TATATATGTGCATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGGGAATAAGACAACTTCA-GGCAGTTTAAGCACCATCAAGAA chr4 + 94230402 21429697 21429696 21429785 21429697 21429696 21429785 89 TATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACAAGTCAACTTCATAGTATACTGGATAAAATCAAGAA ....x.:..x:x.x.xx..x.:.:.:......................x:..:...x........-:.:.xx:.::::.xx........ 65M1I23M 61/88 69.3% 89/94230402 0.0% 1/88 1.1% 24758480 NA +3142 chr4 + 190214555 46303131 46303130 46303199 69 AAGAGCTATCATTTTTTGA--GCAAAAAAAAAAAAGAAAATTCACCTTGTGTAAATATAGTACAGACAAAT chr4 + 94230402 56015731 56015730 56015801 56015731 56015730 56015801 71 AAGATCAAACAATCTTTAAAAGCAAAGAGGGGGAAAAAAAGACAGCTTGTGAAAATATAGTACAGACAAAT ....x.x.x..x.:...:.--.....:.:::::..:....xx..x......x................... 19M2I50M 52/69 75.4% 71/94230402 0.0% 2/69 2.9% -9712600 -84517802 +3017 chr4 + 190214555 46310167 46310166 46310236 70 ACTTACAGCTGCCAAATTTCAGAGGACATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCA chr4 + 94230402 45337206 45337205 45337275 45337206 45337205 45337275 70 ACTTACAGCTTTCCAACTGCATTATACATGTTTGCACATCCATTGGAAAATTTTTGAGATCCATTGGGCA ..........x:.x..:.x..xx:x.....xx..x:..........:....::.:x.::.x......... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 972961 NA +3291 chr4 + 190214555 46315804 46315803 46315976 173 TCATCACAAATCTTATTGAAGCCCTTCCTCTTCTGTTTATCCCTTCTCAATCACAGCCCCCTAGTCTCTGAGGAAATAAGTATCTTGAGTTTAGTGTACACCCTTCCCATACATGT---ACTTTCACATT---TAGTACATATATACACACACACACACACACACACATATATATATAG chr4 + 94230402 46140731 46140730 46140899 46140731 46140730 46140899 169 TCATAACAAATCAAGCTGCTGTGCTCTGTTCTCTTTTTGTATCTAGTCTCTCACAGTGGTACAGTTT-TACAGATATGTGTGCATTCA----AATGTA-----TTGCAATAAATGTTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAG ....x.......xx::..xx.:x..::x.::...x...:.x:..xx..xx......:xx:x:...:.-.:x:..x..:x..::x..x.----.:....-----..x.x...x....---...x.:.:x..---..:..:.....:......x.x....:........:.:......:.. 67M1D20M4D6M5D13M3I11M3I46M 107/163 65.6% 169/94230402 0.0% 16/163 9.8% 175073 NA +3058 chr4 + 190214555 46332187 46332186 46332226 40 AATCAAAGGGTTTTTTGTTGTTGTTGTTGTTTTTAAATGT chr4 + 94230402 50269906 50269905 50269945 50269906 50269905 50269945 40 AAACAAAGGGGTTTTTGTTGTTGTTGTTGTTTTTAAACAT ..x.......x..........................::. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -3937719 -90292683 +3059 chr4 + 190214555 46356974 46356973 46357036 63 TGGGTTTGTTTTTTTTTTGTTTTGTTTTGTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGCTTC chr4 + 94230402 76208453 76208452 76208512 76208453 76208452 76208512 60 TGAGGATTTTCTTTCCCTGTTTTTTTTTGTT---GTTGTTGTTGTTTGTTTGTTTCCTTTTTC ..:.xx.x..:...:::......x.......---.....................::.x:... 31M3D29M 47/60 78.3% 60/94230402 0.0% 3/60 5.0% -29851479 -64378923 +3379 chr4 + 190214555 46356990 46356989 46357032 43 TTGTTTTGTTTTGTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG chr4 + 94230402 27444619 27444618 27444661 27444619 27444618 27444661 43 TTGTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG ......x..x..x.............................. 43M 40/43 93.0% 43/94230402 0.0% 0/43 0.0% 18912371 NA +3105 chr4 + 190214555 46357554 46357553 46357654 101 TAAATGAGCACATACAATGTGCCAGGCACTGTTCTAGGGTCTGAGGATACACAGTAAACAAATAGACTAAAATGTCTGCCTTTGTGAAGCTTTTTTATTTT chr4 + 94230402 6269831 6269830 6269928 6269831 6269830 6269928 98 TAAAGAAGCAC---TCATGTGTTGGGAACGACTCAAGGGATTGAGAATCTAAAGCAGAACAGTGATTTAACATTTTTTCCTTTGTTAGGCTTTTTTCTTTT ....x:.....---:x.....:::..x..x::..x....x:....:..x:.x..:.:.xx.:.::x:...x..x.:.x.......x.:........x.... 11M3D87M 64/98 65.3% 98/94230402 0.0% 3/98 3.1% 40087723 NA +3871 chr4 + 190214555 46364181 46364180 46364260 80 GACCCTATGCATATTACTTAACTTATATGTGCTTCGATATTCTTATCTGTTAAATGTGGCTTATAA----TGCCTATCTTACAG chr4 + 94230402 83501141 83501140 83501224 83501141 83501140 83501224 84 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAG ...:..:x...x..........:.:.......:..::.x...::.:....x.....x:...x...:----.:....:..:.... 66M4I14M 59/80 73.8% 84/94230402 0.0% 4/80 5.0% -37136960 -57093442 +3020 chr4 + 190214555 46370388 46370387 46370430 43 AGAGGGACAAAACAAACAAACAAACAAAAAACCCAACCAACCA chr4 + 94230402 31527607 31527606 31527649 31527607 31527606 31527649 43 AGAAAAAGAAAACAAACAAACAAACAAAAAACCCAACAACCCA ...:::.x.............................x.x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 14842781 NA +3176 chr4 + 190214555 46370388 46370387 46370440 53 AGAGGGACA--------AAACAAACAAACAAACAAAAAACCCAACCAACCAGGAAAAAGGA chr4 + 94230402 18046983 18046982 18047043 18046983 18046982 18047043 61 AGAGAGACATTCCAAGGAAACAAACAGACAAACAAAAAACCCAACAAATCGGAAAGATGGA ....:....--------.........:..................x..:.:.:..:.x... 9M8I44M 45/53 84.9% 61/94230402 0.0% 8/53 15.1% 28323405 NA +3269 chr4 + 190214555 46390181 46390180 46390229 49 CAGGGCCCCCCCTCCCCCCCCTCCCCCCCCCCCACACACACACACTCCC chr4 + 94230402 29289043 29289042 29289091 29289043 29289042 29289091 49 CAGAAATTCCCCTCCCCTCCCTCCCTCCCCCCCCCACACACACCTTCCC ...::x::.........:.......:.......x.........x:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 17101138 NA +3360 chr4 + 190214555 46459113 46459112 46459202 90 TGCCATTGCACTCCAGCCTGTGTGACAGAGCGAGTCTCTGTCTCAAAAAAAAATAAAACAAAAGAAAGAAAAAGAAAGAAAGAAAAGCTT chr4 + 94230402 477600 477599 477689 477600 477599 477689 90 TGTCCTGGCTCTCCAGACCCTCTGAAAGGATGCAGCCCTGTCACAGAGAAATGTACCGCAACAGCAAGGAAAAGAAAGGAAGAAATACTT ..:.x.x..x......x.:x.x...x..:::.x:x.:.....x..:.:...x:..xx:...x..x...:.........:......x:... 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 45981513 NA +3009 chr4 + 190214555 46473546 46473545 46473601 56 ATATACACACACACATATATATATACACATATATATATACACATATATATATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:...........:..:x.:.......x.......:::.:....:...x..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -28052528 -66177874 +3267 chr4 + 190214555 46473810 46473809 46473917 108 TTTCACACACAAATAAACAAAAACAAAACAAAACAAAACAAAAAACTACCTCCCAAGCATGAGAGATTTGAGAAGAAGAGACAAAGGGACATAACAGAAAACATTTTA chr4 + 94230402 77313252 77313251 77313351 77313252 77313251 77313351 100 TTCCAAACACAAACAAACAAAAACAAAAAAAAAACCAACCAAAAACCAATGCCTTTGCATGAGC-ATCAAAACATAAGAGAC-------TATATCAGGATACTTGTTA ..:..x.......:..............x....xxx...x......:.x:x..:xx.......x-..:x:.:x.x.......-------:...x...:.x..x.x... 64M1D17M7D19M 72/100 72.0% 100/94230402 0.0% 8/100 8.0% -30839442 -63390960 +3055 chr4 + 190214555 46478717 46478716 46478758 42 AGAATTTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 92119539 92119538 92119580 92119539 92119538 92119580 42 AGATTTTAAAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAG ...x........:................:...x...:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -45640822 -48589580 +3355 chr4 + 190214555 46479163 46479162 46479244 82 ATTTTAGAGGTAATAAAACTGAGACTAAGAAAAATAAGGTGATTGTCCATAATAATACAGTAGGTTTATGACAAAGCAGAGA chr4 + 94230402 85076526 85076525 85076607 85076526 85076525 85076607 82 ATTTTACTAATGATAAAGCGGTAGCAAATACAAATAAAGTGGCTGTCCAAAATGACAAAGTAATTTAATGGCAAAGCTAAGA ......xx::.:.....:.x.x::.x..x.x......:...::......x...:.:.x....:x..x...:......x:... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -38597363 -55633039 +3340 chr4 + 190214555 46507934 46507933 46508011 78 GGAAAGAAAGAGAATGAAAGTGAATGAGGAGGAAAATTAAATACAGTCAGGAAAGGCTTGATAAAGGACTTAAGAACT chr4 + 94230402 12094095 12094094 12094172 12094095 12094094 12094172 78 GGGAAGAAGGAGAAGGGGAAGGAATGAGGAAGAAAATTAACTGGGATGAGGTGATGCTAGATGAGAGACCAAAACACT ..:.....:.....x.::.:x.........:.........x.:x::.x...x:.x...x...:.::...:x..:x... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 34413839 NA +3022 chr4 + 190214555 46513952 46513951 46513991 40 AAAAAAAAAAAAACAGAACAAACAAACAAAAAAAAAACTT chr4 + 94230402 84399835 84399834 84399874 84399835 84399834 84399874 40 AAAAATAAAACAACAAAACAAACAAACAAAAAAAAAACCT .....x....x....:......................:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -37885883 -56344519 +7713 chr4 + 190214555 46576195 46576194 46576406 212 TTTTCCATCTGTATTGATAAGCATTAAAATACATCCACTAAAGACATTTTTACATTATTTTCTCAAATGCGAGCCAATTTTAATTTAGTGGGCAATTATTTTGAGTGAATGAAAGTTAAATATGTGCCATTTTTACCTAATTTACTCCAGTTAATATTA-----ATTCCTAGCTAATAATTGTAGTATCAGCTATAATGACAAAGGGGCTTATGACA chr4 + 94230402 68885046 68885045 68885260 68885046 68885045 68885260 215 TTTTCTCTTTGAGTTGATAAGTAATGAAATACTTCCACTAAGGACATTTTTATTTTATCATTCAGAATGTGAATGTATTTAAATTTGACTGGTAATTATTGGTGATGAATGGAAGTTAAATATATG-AGTGTTTGCCTAATTTAGTTTGGTTAATCTCATCTTCATTGCTACTAAGTAATGGCTTGAACAACCATCAAGACAAA-AGGCTCACGACA .....:x.:..x:........:.x.:......x........:..........:x....:x.::x:....:..::xx....x.....:::x..:.......xxx::......:...........:..-x:.x...:.........x.:::......x.:.-----...x...x:x.:....x.:xxx.x..:.:..x.x......-:....:.:.... 126M1D32M5I40M1D12M 146/210 69.5% 215/94230402 0.0% 7/210 3.3% -22308851 -71921551 +3211 chr4 + 190214555 46580331 46580330 46580388 58 GTATAAGAAATG-AACTTGTTTTTTTTGTTTGTTTTTTTGTTTTTTTTTTTGAGACGCA chr4 + 94230402 50427843 50427842 50427901 50427843 50427842 50427901 59 GTGAAAGGAATGTCACTTGGTTTTTTTGTTTGTTTTTTTGGTTTTTTTTTTTAGCCATA ..:x...:....-x.....x....................x..........x..x.::. 12M1I46M 48/58 82.8% 59/94230402 0.0% 1/58 1.7% -3847512 -90382890 +4508 chr4 + 190214555 46581277 46581276 46581355 79 TCTTCATCTTCAAAGTACTTGGTAAACATTAAATAATTAATCCCCACAACACATTTGGGAAGTAGGCATACATTATTAT chr4 + 94230402 41768527 41768526 41768605 41768527 41768526 41768605 79 TTTTCATCTTCAAAGCATTTTGCAAACATAAACTAATTAATCTTCCCAACACGTCTGTGAGGTGGGCAAGTGTTATTAT .:.............:.:..x.:......x..x.........::.x......:.:..x..:..:....x:::....... 79M 60/79 75.9% 79/94230402 0.0% 0/79 0.0% 4812750 NA +3099 chr4 + 190214555 46581281 46581280 46581344 64 CATCTTCAAAGTACTTGGTAAACATTAAATAATTAATCCCCACAACACATTTGGGAAGTAGGCA chr4 + 94230402 30612604 30612603 30612667 30612604 30612603 30612667 64 CATCTTCAAAGTGCTGTACAAACATTAACTAATTAATCCTCATAGCCACCCTGTGCGGTAGGTA ............:..xx::.........x..........:..:.:.xxx::..x.x:.....:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 15968677 NA +3167 chr4 + 190214555 46590617 46590616 46590703 87 TAATTTCTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGATTA chr4 + 94230402 80507632 80507631 80507699 80507632 80507631 80507699 68 TAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTT-------------------TCCCCCAAACTGAATTA ........x::.::.....x..x..:...............x.:.......-------------------..x....::...:.... 51M19D17M 54/68 79.4% 68/94230402 0.0% 19/68 27.9% -33917015 -60313387 +3279 chr4 + 190214555 46596291 46596290 46596364 74 GTGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATCACTTGAGCCAGGGAGGCAAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:...........::........x:xx.x.:.x.......:..x:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -29436913 -64793489 +3046 chr4 + 190214555 46630796 46630795 46630868 73 CTGTGTAGTATTCTATGGTATATGTATATATGTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 7572238 7572237 7572310 7572238 7572237 7572310 73 CTGATTAGTCTTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATAT ...xx....x...x..:::....:x.:..:.....:.x.x.x:...x:..x....:.....:....x...... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 39058558 NA +3010 chr4 + 190214555 46630807 46630806 46630879 73 TCTATGGTATATGTATATATGTATATATATATATATATATATATATATATATATATATATATATATATACACA chr4 + 94230402 46063293 46063292 46063365 46063293 46063292 46063365 73 TTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .:..:x:..:....:..:....:...:x::.:..:.x:..:...:.x......:......:xxx.....:... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 567514 NA +3152 chr4 + 190214555 46636985 46636984 46637042 58 GAATATATACACATATATATCTATATATTGATATAGATATACACATATATATATACAA chr4 + 94230402 56867307 56867306 56867364 56867307 56867306 56867364 58 GAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACAA .....:...........:.:.x.......x:.::.x:....:...x:...:..:.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -10230322 -84000080 +3160 chr4 + 190214555 46652125 46652124 46652193 69 CTATCTCCAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAGAA chr4 + 94230402 72824132 72824131 72824199 72824132 72824131 72824199 68 CTATTTTCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAA-ATACAGTGAATATTAAAGAAAAATAA ....:.:.....:..:.......:.....::....x......-.x.x..x:..x.xx.........x.. 42M1D26M 52/68 76.5% 68/94230402 0.0% 1/68 1.5% -26172007 -68058395 +3030 chr4 + 190214555 46701341 46701340 46701389 49 ATATACACACATGCGTGTGTGTGTGTGTATATATATATATAGAGAGAGA chr4 + 94230402 29797141 29797140 29797189 29797141 29797140 29797189 49 ATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAA ...:.:..::..........:.....:x.........:.:.x.....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 16904200 NA +3148 chr4 + 190214555 46718446 46718445 46718520 75 TGGTG-ACTCACAATCCCAGCTACTTGGGAGGCTGAGGCAGAAATATCACTTGAGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....-..x:::.:.:...........::........x.xx:x:x.x.......:.....:..:.:x:.....:.. 5M1I70M 52/75 69.3% 76/94230402 0.0% 1/75 1.3% -29314756 -64915646 +9388 chr4 + 190214555 46720170 46720169 46720367 198 CCATCAG-TTATGGTTGTGTGTCTGATTG-GAAGATCTTTCCTTTCAAGAATG--TGAAATGTTTCCATGGAGATCAGCTTGAGATAGCCCAGTGACGAGCTTCTTAGCTATAATTTCACATTGGTTTCTATGGTTTCCAGATAGGG----GAAGAAAATGAAGTTGCAGA--------------------TTTTTTTGT-------AATGTAAAAGGTTATTAAAAAATAAG chr4 + 94230402 68901339 68901338 68901571 68901339 68901338 68901571 233 CCATCAGACTTTGGCCATTTGTCTGATTTTGAAAATCTTTCATTTCAAGAAAAAATGAAATGTTTCCATGGAGATCAGCCAGAGATAGCCAAATGACGAACTTCTTGGCTGTACTTTCAGTTTGGTTTCTATGGTTTCCAGACAAGGAGGTGGAAAAAGTGAAGTTGCTGAGGTTCTTTTTCTTTCTTTTCTTTTTCTGCTTTCCTGCATGTAGAAGGTTAGTGTAAACCAAG .......-:.x...:::.x.........x-...:.......x.........x:--........................:x.........x.:......:......:...:..x.....xx.....................:.:..----.:.:...:.........x..--------------------.....:..:-------x.....:.......x.:x...x:... 7M1I21M1I23M2I92M4I20M20I9M7I26M 162/198 81.8% 233/94230402 0.0% 35/198 17.7% -22181169 -72049233 +20643 chr4 + 190214555 46723821 46723820 46724408 588 CTGAGACATTTACAACAGCAGGCATTTTCTC---TTCCTCTTCTTCACGGGAGGCGGGCAGAGGACTGCTCGGATCGCTTCGTCAAACACTGTCTTGATGCCTCGCTGTGTGAGCGCCGAGCGCTCCAGGTATTTTACAGCACCAATCTCCTTAGCCATGGCTAGACCCTGCGGATAGGTGATGGGAGTCAGCTTCTTCTCCTTCAGTTTCTCGATCGGGTCTTTATCATCCCTAAGATCAAGTTTAGTTCCCACTAGGATGATGGGAGTGTTGGGACAGTGGTGCCGCACCTCAGGATACCACTTTGCACGGACATTTTCAAATGATGCAGGACTCACAAGGGAAAAGCAAATTAAGAACACATCTGTTTGCGGATAGGATAGGGGGCGTAATCTGTCATAATCTTCTTGTCCAGCTGTATCCCATAAGCCCAGATTCACCGGTTTTCCATCTACCATAACATTGGCAGAATAATTGTCAAAGACAGTAGGGATATATTCTCCAGGAAATGCATTGGTTGTGTAACTGATCAGTAGGCAAGTTTTACCTACAGCTCCGTCTCCCACCACCACAAACTTGATGGCCTGCAT chr4 + 94230402 2233579 2233578 2234163 2233579 2233578 2234163 585 CCGAGGTAACTACAATAAGACACATTTCCTTGTGTTCTTCTTTGTCACAGGA------TAAAGAACTGCACGCACAGCTTCAGCAAACACCTCCCGAACACCCTCCTGATTCAATGCTGAGCACTCCAAATATTTGACTGCTCCGATTTGTTTAGCCAGTGAAGTCCCCTGTTGTGGGGTAGTGGGAGCCAAGCTTTGCTCTTTTAACTTTTTAACTGTTTCCAGGTCGTTTCTCAAGTCTCTCTTCGTGCCCACTAAAAGAATGGGAACATTAGGACAGTGGTGAGAAACTTCAGGATGCCACTTGTGCCTCACATTTGCATAGGAAGACGGGCTGCCAATGGAGAAGCAGATGACAAATACATTGGTTTGAGGATATGAGAGTGTGCGCAGACGGTCATATTCCTCCTGGCCTGCAGTGTCCCAGAGATTCAGGCTAACCGTCCGGCCATCAACAGTCATTTGGGCACTATAGTTGTCAAACACAGTAGGGATGTACTCTTCTGGGAAGGCATTGGTGGTATAGCTGATGAGAAGACAAGTTTTTCCCACAGCACCATCTCCAACAACTACGCACTTTATAGTCTGCAT .:...::.x:.....:.:x.x:.....:..:---...:....:x....:...------:.:..:.....x..x.:x.....:x.......:x:.:x:.::..::x...xx.x.::..:....:.....::.....x..x..x..:..:.x:.......xx.xx:xx.....:x.xx:...::......:..:x:.:.x...:..:.::..:.::.::.xx..:xx:..:.::..x.::..xxx:..x..x.......::.x:......:::..:...........xx:x..:.......:......xxxx.xx......x..x.x..x.xx..:..xx...x...:.....:..x.x:..:....:x.....x.....x..x..x.x...:.:x.x......x..:..:..x..x..x..:.....x.::::...::.x....x::xx.....x..x:.x.:x.x....xx...:........x...........:..:...:.x..:..x........x..:..:.....x..x..:........x..:.....x..:.....x..x..:..:x....x..:.:...... 31M3I18M6D533M 381/582 65.5% 585/94230402 0.0% 9/582 1.5% 44490242 NA +3903 chr4 + 190214555 46728533 46728532 46728602 70 CATGGTGGTGCACGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCATGAGAATCCCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::..........--....:.x...........::........x.x..x...x.x.........:.:.. 14M2D54M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% -29304664 -64925738 +3319 chr4 + 190214555 46729317 46729316 46729385 69 GTGGTGGCACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-......----..:.:...........::........x.:x.x...x..........::.:.. 6M1D6M4D52M 52/64 81.2% 64/94230402 0.0% 5/64 7.8% -29303884 -64926518 +3166 chr4 + 190214555 46729411 46729410 46729460 50 CCATCTCAAAAAACAAACAAACAAAAAAACCACAACAAAAAACAACAAAA chr4 + 94230402 27325820 27325819 27325869 27325820 27325819 27325869 50 CCTCCTCAAAAAACAAAAAAACAAAACAACAACAACAAAAAACCCCAAGA ..x:.............x........x...x............xx...:. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 19403591 NA +3129 chr4 + 190214555 46763210 46763209 46763262 53 TTATAATATATATTCATATATATTATATATATACATATATATACACACACACA chr4 + 94230402 30834187 30834186 30834236 30834187 30834186 30834236 50 TCATGGTATACA---ATATGTATTATATATATATATATACACACACACACACA .:..::....:.---....:.............:.....:.:........... 12M3D38M 42/50 84.0% 50/94230402 0.0% 3/50 6.0% 15929023 NA +3271 chr4 + 190214555 46773037 46773036 46773188 152 AGAAAATTTTTACACTTC---AATGAAAATATACATATTCTCTGTTCTTTTGCAACACATGAAATACGATGTCTATTTTTTAACTGATTTTATGTTCTACTCCAGATAGAAACAAGAAAATAGAAAAATAGTTTTCTACTGTTATAAGGTAGTAT chr4 + 94230402 62863308 62863307 62863460 62863308 62863307 62863460 153 AGAAAAATACCATGCTCCTGAAATGCAGTGGTACTCACTGCTTTTTCTTTTGTCAGAGATTGTTTA--ATGCTGATGGATAAATTGAATATGTATTTCACCCTGATCAGAGAACAGAGAGTAGGAAAATAATTTGCTACTGCTATAATCTAATAT ......x.x::.::..:.---....x.:xx:...x:.:.x::.x........:x.x.x..x:xx..--...::x..xxx.x..:...x.x.:.:..::..:.:::x:...:.xx...:.:...:......:...x......:.....xx..:... 18M3I45M2D87M 91/150 60.7% 153/94230402 0.0% 5/150 3.3% -16090271 -78140131 +3600 chr4 + 190214555 46787307 46787306 46787376 70 CGTGGTGGTGCATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAACGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........--.x....:.:...........::........x.xx.x...:.:.........:.:.. 12M2D56M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -29245890 -64984512 +3131 chr4 + 190214555 46797047 46797046 46797131 85 CTAACCTG---CACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGAGT chr4 + 94230402 74108172 74108171 74108259 74108172 74108171 74108259 88 CTTACCTGTCACCCTATGTGCACACACACTCAAGTATTTAGGATTTTACAGAAGAATTAAAAAAGAAAACAAAAAAAAAACTAAAAGT ..x.....---.x.x.........:::..:.x.:x.:....::.x.x.:.:..:..xx......:....x..........xx:.:... 8M3I77M 59/85 69.4% 88/94230402 0.0% 3/85 3.5% -27311125 -66919277 +3174 chr4 + 190214555 46830193 46830192 46830250 58 GTGTGCCTGTAATCCCAGCTACTGGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAG chr4 + 94230402 76033204 76033203 76033261 76033204 76033203 76033261 58 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ...::.x....:.:.........x..:........x.xx.x...x::........... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -29203011 -65027391 +3673 chr4 + 190214555 46942484 46942483 46942554 71 ACGTGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACGCGGAAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::.........:--....:.:...........::........x.x..x...x::.......x.:.... 15M2D54M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% -29090712 -65139690 +4462 chr4 + 190214555 46951709 46951708 46951828 120 TAAAATACTAGGAAATTTGTTATATATATATATGTGTGTGTGTGTATATGTATGTGT----ATATATATGTGTGTATATATATGTGTGTACGTGTGTGTGTGTGTGTGTGTACATATATATATA chr4 + 94230402 21109173 21109172 21109295 21109173 21109172 21109295 123 TGAAAAATAAGGAAATTTGCT-TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCA .:...x.:x..........:.-....:..:.:...x.x....x.::...x...:...----.:.....:x:.....:x....:..:.....x::..:x.x.....:.:...::..:x....::. 21M1D35M4I63M 82/119 68.9% 123/94230402 0.0% 5/119 4.2% 25842536 NA +3308 chr4 + 190214555 46951724 46951723 46951837 114 TTTGTTATATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTACGTGTGTGTGTGTGTGTGTGTACATATATATATAATTTTCAAG chr4 + 94230402 89812961 89812960 89813066 89812961 89812960 89813066 106 TTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGT--------ATATATGTCTAAATCTCAAG .....x::.....x...x:.:.....:.:.x..x:.::x.xx...:..:..::x::x:x:..::..:...x.x.............--------......:.x...x.:..... 86M8D20M 69/106 65.1% 106/94230402 0.0% 8/106 7.5% -42861237 -51369165 +4672 chr4 + 190214555 46951728 46951727 46951895 168 TTATATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTG----------TGTATATATATG----TGTGTACGTGTGTGTGTGTGTGTGTGTACATATATATATAATTTTCAAGCGGTATCTTGATATCCACATTAAACTGACTGTACTTAGAAAAACTTTT-------CAGGGAGGCA chr4 + 94230402 72529190 72529189 72529368 72529190 72529189 72529368 179 TCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAATTTTACTAT---------AATGAC-ACACTTTGAAAAAGCCTTCTGCTGACAGGGAGGCA .:...:.....:..:.:.:.:.x.x.....x:....:..x.xx.x:x..----------.x:.:..x...x----.x.:...::.............................x::.....x..:.:x..:..:x...---------.x....-::....x......x::..-------.......... 49M10I12M4I63M9D6M1D18M7I10M 114/158 72.2% 179/94230402 0.0% 31/158 19.6% -25577462 -68652940 +4672 chr4 + 190214555 46951728 46951727 46951895 168 TTATATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTG----------TGTATATATATG----TGTGTACGTGTGTGTGTGTGTGTGTGTACATATATATATAATTTTCAAGCGGTATCTTGATATCCACATTAAACTGACTGTACTTAGAAAAACTTTT-------CAGGGAGGCA chr4 + 94230402 72525617 72525616 72525795 72525617 72525616 72525795 179 TCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAATTTTACTAT---------AATGAC-ACACTTTGAAAAAGCCTTCTGCTGACAGGGAGGCA .:...:.....:..:.:.:.:.x.x.....x:....:..x.xx.x:x..----------.x:.:..x...x----.x.:...::.............................x::.....x..:.:x..:..:x...---------.x....-::....x......x::..-------.......... 49M10I12M4I63M9D6M1D18M7I10M 114/158 72.2% 179/94230402 0.0% 31/158 19.6% -25573889 -68656513 +3036 chr4 + 190214555 46951730 46951729 46951797 68 ATATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTACGT chr4 + 94230402 5214254 5214253 5214321 5214254 5214253 5214321 68 ACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .:.:..x..::...:..::.x..:..:...:..:.:.x.::.:......:..::.x.......:..:. 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 41737476 NA +3399 chr4 + 190214555 46951738 46951737 46951806 69 ATATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTACGTGTGTGTGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:x.:...:...:...x:.:.....x.:....:...:....:......::.x....:.::.x...:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -39682185 -54548217 +3127 chr4 + 190214555 46951740 46951739 46951806 67 ATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTACGTGTGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx......:::x..x::x..x..........:.:...:...........:::.:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 19626249 NA +3302 chr4 + 190214555 46951742 46951741 46951804 63 GTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTACGTGTGTGTG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:...:..:x:...:.:.x......:..::...........:..x...:.:.:.x...:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -39682187 -54548215 +3059 chr4 + 190214555 46951789 46951788 46951835 47 TGTGTACGTGTGTGTGTGTGTGTGTGTACATATATATATAATTTTCA chr4 + 94230402 72321894 72321893 72321940 72321894 72321893 72321940 47 TGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACA .....xx:.................:...........x.:..:.x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -25370105 -68860297 +3249 chr4 + 190214555 46953956 46953955 46954032 77 CTCTGTTACTTAACAGCTATGTAATTCTGGGCAAATCACTTAGACCTTTCTGTGCCTCAATTTTCTCATCTGTAAAA chr4 + 94230402 13242455 13242454 13242530 13242455 13242454 13242530 76 CTCTGCCACTGACTCACC-TGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAA .....::...x.x:x:.:-...:.:::.......:....x...x.::.::x:.......:...:.:........... 18M1D58M 52/76 68.4% 76/94230402 0.0% 1/76 1.3% 33711501 NA +3288 chr4 + 190214555 46965192 46965191 46965249 58 GATGCTTAGTGTGGTCATGGTGAGGACAGTTGTTATTCCTTCAAAGCAAAAGAGCAGA chr4 + 94230402 68715245 68715244 68715302 68715245 68715244 68715302 58 GGTGCTGATGGTGGTCATGGTCAGCACAGTTGTGATTCCTGCAAAAGAAAGAAGCAGA .:....x.xx...........x..x........x......x....:x...::...... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -21750053 -72480349 +3543 chr4 + 190214555 46978547 46978546 46978629 83 CACGGTGGGGCATGCCTGCATTCCCAGCTACTTGGGAGGTTGAGGCAAGAGAATCACTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....x...:.--..:.x.:...........::...:....x.xx.x...x..........::.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -29054650 -65175752 +3086 chr4 + 190214555 46978662 46978661 46978738 77 GGGCAACAAGAGCAAAACTTCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAGAAAGAAAAGAAAAG chr4 + 94230402 14513436 14513435 14513512 14513436 14513435 14513512 77 GGACAATAAAAGCAAGATTTACTGTGGCAAGTGAATAAAAAAAAAAGAAAAAGAATTAGCAAAAAGCAAACAAAAAG ..:...:..:.....:.:..xx.x.x:x..:x:..x..........:........xx..x..:..:x...x:..... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 32465226 NA +3059 chr4 + 190214555 46978689 46978688 46978755 67 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAGAAAGAAAAGAAAAGTAAAAAGGAAAGCAAAA chr4 + 94230402 75241511 75241510 75241577 75241511 75241510 75241577 67 AGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAA .::...x.::..xx.x.:.x.:..........:...........:..x..x.xx.::.......... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -28262822 -65967580 +3219 chr4 + 190214555 46985163 46985162 46985273 111 GATTATATATAGCAAGTTCAAAACAATT---AAATATTTAAAATAAACTTTTAAAA--TAAAGACAGTCAACCTAAAATGACATTCAAAGGAAAACTAAGAAATAATTTTAAAAGG chr4 + 94230402 73277750 73277749 73277865 73277750 73277749 73277865 116 GGCTACATGTATGAATTCCATGATATTTTTCAAAGGTGTAATTAATACATTTAAAAGTTAAAAGCAATCAATATTACGAGACATTTAGATTAAACCTAAGAAATAATTTAAAAAGG .::..:..:..xx..x.:..x:.:.x..---...x:.x...xxx.x..x.......--....::..:....:x.x.x:x......:.:.xx...x..............x...... 28M3I25M2I58M 76/111 68.5% 116/94230402 0.0% 5/111 4.5% -26292587 -67937815 +3564 chr4 + 190214555 46991056 46991055 46991128 73 TGCACCTGTAATCCCAGCTACTCTGGGGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGCCAGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:x:::.......x.xx.x...x..........::.:...:xx...:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -29042149 -65188253 +3702 chr4 + 190214555 46997701 46997700 46997783 83 TGTACATATAGATGTGTGTGTATATATATGTATGCACACACGTATATATATACACACACATATATATGCACACATACACATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x...x.:x:.x.......:.:.:.:.....xx.:::.x.:...:....::.x.:....:.x................:.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -38836832 -55393570 +3088 chr4 + 190214555 46997705 46997704 46997754 50 CATATAGATGTGTGTGTATATATATGTATGCACACACGTATATATATACA chr4 + 94230402 37579519 37579518 37579568 37579519 37579518 37579568 50 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCA ......x............:.....:x........:.:....xx.:.:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 9418186 NA +3257 chr4 + 190214555 46997716 46997715 46997816 101 GTGTGTATATATATGTATGCACACACGTATATATATACACACACATATATATGCACACATACACATATACAC--------------ATATACATATAACAGTTTCTTTATTCATT chr4 + 94230402 54963190 54963189 54963304 54963190 54963189 54963304 115 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATGGAACAACTGCAGAACTCATT ..x.......x:..::.x:::.....x......:.:.......xx:.::.::..x..:.:......x..:..--------------.:......:x....::.x.xxx.:..... 72M14I29M 67/101 66.3% 115/94230402 0.0% 14/101 13.9% -7965474 -86264928 +4304 chr4 + 190214555 47017954 47017953 47018203 250 ATCTTTTCTGT-TGTTATTCATGTTTTCATTTAGTTTTTCCTGCTTTAAAATAAGTTTTCTTTTCTTCTTCTTTCTTCTTCTTTGTCGTCATCTTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCTTCTTCTTCTCCCTCTTCCTCCTCTGCCTCCTCTTCTTCTCCTCC-TCATCC------------TCCTCCTCTTTCTTCTTCCTTTTTCCTCCTCCTCCTCCT----TTTTCTTCTTCTCTTCTTCTTCTTTCTTTTTTTTTTG chr4 + 94230402 67728273 67728272 67728524 67728273 67728272 67728524 252 ATATTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTT------ATGCCTCTTTTTTTTCCCCTACACCCTTCT-------CATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTT--TCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTT-TTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTG ..x.......:-...:x.:.x.xxx:.:x...:x.:....x.....------.x.::.::....:...::..x:x::.....-------...x..:....::x:..x::.x..x..x.....x..x...--..:..x.....:x..:.x.:::::..:..x..::....-...:..------------......::.xx..:...:-......x...x.........----.x...:.:xx...:::x..xx...:...x.x::.:.. 11M1I34M6D30M7D40M2D38M1I6M12I18M1D20M4I37M 150/234 64.1% 252/94230402 0.0% 34/234 14.5% -20710319 -73520083 +3003 chr4 + 190214555 47018008 47018007 47018078 71 TTTTCTTTTCTTCTTCTTTCTTCTTCTTTGTCGTCATCTTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCTT chr4 + 94230402 61558580 61558579 61558650 61558580 61558579 61558650 71 TTCTCTCTTTTTTGTCTTTCTTCTTCTTTTTGTTCATGTCACGCTTCCTCAACTCCTCCCTGATGCTCTTT ..:...:..:..:x...............x.xx....x.:x.x.:.....xx..:..:...xx.x...:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -14540572 -79689830 +3059 chr4 + 190214555 47018011 47018010 47018088 78 TCTTTTCTTCTTCTTTCTTCTTCTTTGTCGTCATCTTCCTCCTCCTCCTCTTCTTCCTCCTCCTCCTTCTTCTTCTCC chr4 + 94230402 2205172 2205171 2205249 2205172 2205171 2205249 78 TCTCCTCACCTTCTTCCTCCTCCTGAGTATTTATTTTCATGCTCCTATTACCTTATCTCCTTCTGCTTGTTCTTCTCC ...::..x:......:..:..:..xx..xx.:..:...x.x.....x:.x:::.x:.....:..x...x......... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 44812839 NA +3017 chr4 + 190214555 47018033 47018032 47018074 42 CTTTGTCGTCATCTTCCTCCTCCTCCTCTTCTTCCTCCTCCT chr4 + 94230402 46163417 46163416 46163458 46163417 46163416 46163458 42 CTCTGTCGCTGCCTTCCTCTCTCTCCTCTTCTTCCTCCTCCT ..:.....::::.......:::.................... 42M 34/42 81.0% 42/94230402 0.0% 0/42 0.0% 854616 NA +3170 chr4 + 190214555 47018046 47018045 47018123 78 TTCCTCCTCCTCCTCTTCTT-CCTCCTC---CTCCTTCTTCTTCTCCCTCTTCCTCCTCTGCCTCCTCTTCTTCTCCTCCTC chr4 + 94230402 18131244 18131243 18131325 18131244 18131243 18131325 82 TTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTC ..::..x.:..:......:.-.......---....::...::.::::.x..:.....:.x...::.x.:.......:.:... 20M1I7M3I51M 54/78 69.2% 82/94230402 0.0% 4/78 5.1% 28886802 NA +3571 chr4 + 190214555 47018128 47018127 47018207 80 TCCTCCTCTTTCTTCTTCCTTTTTCCTCC---TCCTCCTCCTTTTTCTTCTTCTCTTCTTCTTCTTTCTTTTTTTTTTGGTTT chr4 + 94230402 62204752 62204751 62204833 62204752 62204751 62204833 82 TCCACCTACTTCCACTTC-TGTTTCCTCAAAATCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTTTT ...x...x:...:x....-.x.......x---..:..:......x.....:.:.......:....:..:....x..:..x... 18M1D10M3I51M 61/79 77.2% 82/94230402 0.0% 4/79 5.1% -15186624 -79043778 +3518 chr4 + 190214555 47019594 47019593 47019712 119 CTCCCTTCCTCCCTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTT ..::x......:.:.:.::xx.x:.......:.:....:.:x..::.:.x....xx.....--...xxx:::..x....:.:x.xx..:....:...--.:.....:...::......:.. 61M2I34M2D22M 75/117 64.1% 119/94230402 0.0% 4/117 3.4% -16677523 -77552879 +3597 chr4 + 190214555 47019608 47019607 47019724 117 TCTTTCTTTCTTTCT---CTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTCTTT chr4 + 94230402 29005388 29005387 29005508 29005388 29005387 29005508 121 TCTTTCTTTCCTCCCAGATTATTCATTTTCCTTTCTTTTGTACTGTTTTTATTCTCTTGACTTCATGCTTTCTGTTCTGACTTACTTCCCTCCCTCTCCATTCCTTGTTTGCTTATTCTTT ..........:.:.:---:.x.::x.:..:........:x.x..x.:...x..-....xx:...x.x......x.:..xx:..x....:::::::..:.x......x...x...x...... 15M3I35M1I67M 78/117 66.7% 121/94230402 0.0% 4/117 3.4% 18014220 NA +3156 chr4 + 190214555 47019656 47019655 47019751 96 TTTCTTTCTTTCTTTCTT-TCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCACGGGCTCTCACTTTGTT chr4 + 94230402 49829835 49829834 49829924 49829835 49829834 49829924 90 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT-------CACACACACACTTTGTT ..:.x..:.:.x.xx...-.:...x.::x....:.....:...:.............:...::.::.:.:...-------.:x:.x.x......... 18M1I54M7D17M 62/89 69.7% 90/94230402 0.0% 8/89 9.0% -2810179 -91420223 +3664 chr4 + 190214555 47019885 47019884 47019975 91 ATAATATATGTATATGTATATGTATAT-----GTATATGTATACGTATATGTATACGTATATGTATATGTATATGTATATATATTTTGTAGAGACA chr4 + 94230402 32744947 32744946 32745042 32744947 32744946 32745042 96 ACAATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATATTCTGTAGATGCA .:...:..:::x...x...x.:..:..-----.x....:x....:..:..::.:..:x:.:..:..:...:.......:......:......x:.. 27M5I64M 62/91 68.1% 96/94230402 0.0% 5/91 5.5% 14274938 NA +3684 chr4 + 190214555 47031756 47031755 47031805 50 CTCTCTCTCTCTCTCTCTCTTTTTTTCTTGGTATGTTTCTTTTTACGTGT chr4 + 94230402 26578269 26578268 26578318 26578269 26578268 26578318 50 CTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGT ..................:.......:.........x.x.:.x....... 50M 44/50 88.0% 50/94230402 0.0% 0/50 0.0% 20453487 NA +3322 chr4 + 190214555 47037530 47037529 47037585 56 TTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTACTCTAAGCCACATTA chr4 + 94230402 90203142 90203141 90203195 90203142 90203141 90203195 54 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATTAAG--ACATTA ........................xx.x............::x:....--...... 48M2D6M 47/54 87.0% 54/94230402 0.0% 2/54 3.7% -43165612 -51064790 +4008 chr4 + 190214555 47077820 47077819 47077982 163 AATATAATATAT-----ATTATATATTTTAT-ATATATTTTTATATATTTTATATATATTATATGTATTTTTATATATATTATATGTATTTTATATATATTATATATTTTATATATATTATATATTTTATATAT---ATTATATATTTTATATATATATTTTATATATAATA chr4 + 94230402 26320182 26320181 26320344 26320182 26320181 26320344 163 AATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTG-----ATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTT-TA---GTATTGTATATGTAATA ...:..:.:.:.-----..x.x.......x.-....:.x..:.x..:..x-----.....xx..xx::..xx..x...x.:.:......x.xx..:...........x:......:.x.....x.x....:...---..x:........-..---:....x.....:..... 12M5I14M1I18M5D79M3I12M1D2M3D17M 113/154 73.4% 163/94230402 0.0% 18/154 11.7% 20757638 NA +3008 chr4 + 190214555 47092134 47092133 47092192 59 CTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 72001429 72001428 72001487 72001429 72001428 72001487 59 CTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAG ...::...:.x..::..x.:...:.....:...:...........:.::..:.x.x... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -24909295 -69321107 +3552 chr4 + 190214555 47107550 47107549 47107643 94 GACACTGGGAAAAT-----AACCTCTCTGTGCCTCTGTTTATTCATCTGTAAAATGGAGCCAATAATATCAACT--CCTTA-AAGGTTGTTGTAGGAATAAA chr4 + 94230402 83501141 83501140 83501242 83501141 83501140 83501242 102 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAA ...x.....x....-----.....x.x........x....x::..:..............::...:..x:x..:--...:.-.:..x.:....::.:x.... 14M5I55M2I5M1I20M 70/94 74.5% 102/94230402 0.0% 8/94 8.5% -36393591 -57836811 +3149 chr4 + 190214555 47113252 47113251 47113328 77 GTCGTGCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGAAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......x....:.:.........:x.:........xxxx.x...x::........::.:..x:xx:..:..:.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -28919949 -65310453 +3200 chr4 + 190214555 47174839 47174838 47174982 144 ATAGGCTTCCTCCCTCCCTCCT-----TCCCT--CCCTTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCCTCCTCCTTCCTTCCTTC---TTTTCTTCCTTCCTTTCATCATT chr4 + 94230402 33980776 33980775 33980929 33980776 33980775 33980929 154 ACAAGTTTCTACTTTCTCACCTCAAATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTTATT .:.:.:...:x.::..:.x...-----..:..--:.x..::x.:...x.xxx.x.::...:x...:x.....xx....x......x......:.....x.x.....:::..:::....x:.::.x...---..:x....x:::.x..:x.:... 22M5I5M2I94M3I23M 89/144 61.8% 154/94230402 0.0% 10/144 6.9% 13194063 NA +3274 chr4 + 190214555 47174909 47174908 47174997 89 TTTCCTTCCTTCCT----TCCTTCTTTCCTTCCTTCCCTCCTCCTTCCTTCCTTCTTTTCTTCCTTCCTTTCATCATTC--CTTCCTTCCTCCCT chr4 + 94230402 63998162 63998161 63998256 63998162 63998161 63998256 95 TTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTT .......:.:..:.----...:..:......x..x:...:......xx......:::x....:.x:.....:.:.x..:--.:..x...:x..:. 14M4I61M2I14M 62/89 69.7% 95/94230402 0.0% 6/89 6.7% -16823253 -77407149 +3027 chr4 + 190214555 47174985 47174984 47175040 56 TTCCTTCCTCCCTTCCTTCCTCTCTCTTCCTTCTTTCTTCCTTCCTTCCTCCCTCC chr4 + 94230402 50936073 50936072 50936128 50936073 50936072 50936128 56 TTATTTCCCCCCCTTTTTTTTTTTTCTTTCCTCTTTCTCCCTTCCCCCCACCCCCC ..x:....:...:.::..::.:.:....:.:.......:......::..x...:.. 56M 39/56 69.6% 56/94230402 0.0% 0/56 0.0% -3761088 -90469314 +3051 chr4 + 190214555 47206760 47206759 47206910 151 ACAGAATCAAATGGTCCACATTTTTGTACAGCTAGAGAATATAATTTGTTCTCTAATAAATACAATATATTAAAAGTTTATTGA-ATTATAATATATATGTATATATATGTGTGTGTGTATGTATATATATATGTATATGTGTGTGTGTTTA chr4 + 94230402 92759607 92759606 92759745 92759607 92759606 92759745 139 ACAGGTTTGGACATTCTGCAGTGCTGTACAACAGGTGAGGAT---------CCAAACAAACAT----TTTTCATAGCTCAGTGCCACTGCAGTACATTGGTGCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGTAGTTA ....:x.:::.::x..::..x.x:......:.x:.x..:x..---------:.x..:...:.:----.x..x.x..:.:.x..x-.:.::.:..:..xx..::.:..x....::.....xx:x............:.:.........:x... 42M9D12M4D17M1I67M 86/138 62.3% 139/94230402 0.0% 14/138 10.1% -45552847 -48677555 +3143 chr4 + 190214555 47211277 47211276 47211423 147 TAGTTTGAAGCAAGAAAAACATTTTCAACTAAGAGAT--------CTTTACAACT--TAAGA------AAAGTGTGCTTACTCCAATAATTCATTTGCTTTGTATTAGGTATTATTAGGTATCTTGTGTATTAGGTATTATTAGTTATAATACTCACTTTAAA chr4 + 94230402 5951238 5951237 5951400 5951238 5951237 5951400 163 TGATTTACAACAAAAAAATAATTCTTAAATATTGTATACATGGTACTTTAACATTGGTAAGACACTATGAGGTATACATACAATAAAAAGAAGTTTACATTGGAACAGGAAGTACAAGGTATCTGGAAAATTATGAATTATTAGCTATAAAACTAACTTGAAA .::...:x.:...:....xx...:.:..x..xx:x..--------.....xx.:.--.....------:.:..:.:.x...xx:..x..xxx:...:.x...x.x:...x.x..:x........x.x:x....x.x........:.....x...x....x... 37M8I10M2I5M6I95M 97/147 66.0% 163/94230402 0.0% 16/147 10.9% 41260039 NA +3021 chr4 + 190214555 47246270 47246269 47246312 43 ATTCCATCATATATATATATATATATATATACACACACACACA chr4 + 94230402 41650586 41650585 41650628 41650586 41650585 41650628 43 ATTTCATTAAACATATATATATATATATACACACACACACGTA ...:...:.x.:.................:..........::. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 5595684 NA +3137 chr4 + 190214555 47246275 47246274 47246377 103 ATCATAT---ATATATATATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 54005678 54005677 54005782 54005678 54005677 54005782 105 ATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT-TAGCTTTATACATGT ..:....---.:.:....:...x......:...:.............x.x.:x:::x.xxx..:...x.x.xx..:....:....x:...-..xx.x....:..:. 7M3I80M1D15M 70/102 68.6% 105/94230402 0.0% 4/102 3.9% -6759403 -87470999 +3036 chr4 + 190214555 47246281 47246280 47246320 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 42837199 NA +3361 chr4 + 190214555 47246303 47246302 47246355 53 CACACACACACACACACACACACACACATATGTACATATATATATATATATAT chr4 + 94230402 74526077 74526076 74526129 74526077 74526076 74526129 53 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..............::x...:.....x....:...:.......:...x..x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -27279774 -66950628 +3382 chr4 + 190214555 47246308 47246307 47246371 64 ACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATAT chr4 + 94230402 74526066 74526065 74526129 74526066 74526065 74526129 64 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ....xx.x.:x............:...x.....:.:.x.......::.......:...x..x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -27279758 -66950644 +3146 chr4 + 190214555 47246325 47246324 47246392 68 CACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..:....:.......:.:...:x::.:..:.x:..:...:.x......:......:xxx.......:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 1183027 NA +3113 chr4 + 190214555 47246329 47246328 47246420 92 CATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATACCACAGTTTCTTTATCCAC chr4 + 94230402 46063298 46063297 46063389 46063298 46063297 46063389 92 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCTCAAC ....::.:::..:..:.:...:x::.:..:.x:..:...:.x......:......:xxx.......:..::.:.x.:.x.x....xx..x.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 1183031 NA +3012 chr4 + 190214555 47246338 47246337 47246413 76 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATACCACAGTTTCTT chr4 + 94230402 65285569 65285568 65285644 65285569 65285568 65285644 76 ATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTT ....:.xx..:.xx.xx...x..:.......:....x.........x.:.:.:.x........:::.:x:...:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -18039231 -76191171 +3125 chr4 + 190214555 47254333 47254332 47254390 58 TACATGGTGGATGATGTTTCTTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59620850 59620849 59620907 59620850 59620849 59620907 58 TACGTTCTGGGTGCTGCTTCTTTTGTTTGTTTCTTTTCATATTTCATTTTTTTTTTTT ...:.xx...:..x..:.......x.......:....:x.x...:x............ 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -12366517 -81863885 +3033 chr4 + 190214555 47254334 47254333 47254394 61 ACATGGTGGATGATGTTTCTTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 76325758 76325757 76325818 76325758 76325757 76325818 61 ACGTTGTGGCTGGTAGTCTTGTTCTGAGTTCTCTCTTTTTTTTTTTTTCTTTTCTTTTTAA ..:.x....x..:.:x.::.x....xx...:.:.:.............:....:.....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -29071424 -65158978 +3588 chr4 + 190214555 47264005 47264004 47264084 80 AGTGATACACACCTGTAGTCCCAGCTACTCAGGAGGCAGAGCTGGGAGGATCACTTGAGCCCAGAAGAGGGAGGCTGTAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...:--......:.........::::....x....:xx.x.:.x.......:........xxxx:........ 11M2D67M 57/78 73.1% 78/94230402 0.0% 2/78 2.6% -28769195 -65461207 +3016 chr4 + 190214555 47293113 47293112 47293161 49 TTTTGTTGTTGTTGTTGTTGTTGTTTTTCTTGGTTTGTTTGTTTTTGAG chr4 + 94230402 74136542 74136541 74136590 74136542 74136541 74136590 49 TTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCAGG ..........:.........xxx.....x..x.............:::. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -26843429 -67386973 +3210 chr4 + 190214555 47322839 47322838 47322911 73 TGCACCTGTAGTACCAGCTACTCAGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......x.........::::........x.xx.x...x::........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -28710366 -65520036 +3314 chr4 + 190214555 47325295 47325294 47325377 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCATTTGAACTTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x..:......:::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -28707902 -65522500 +3146 chr4 + 190214555 47344690 47344689 47344750 61 TTTTTTTGTTTTGTTTTGTGTGTGTGTTTTTTTGTTTTTTGTTTTTTGTTTTTGACAGAGT chr4 + 94230402 15856120 15856119 15856180 15856120 15856119 15856180 61 TTTTTTCCTTTTGGTTTGTTTGCCTGTTATGTTTTTTGTTGCTGTTTGCTTTTGACAGAAT ......:x.....x.....x..:x....x.x..x...x...:.x....:..........:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 31488570 NA +3061 chr4 + 190214555 47350179 47350178 47350231 53 CAGATTATATATATATATATATATATATATATATATATATAGAGAGAGAGAGA chr4 + 94230402 49681670 49681669 49681722 49681670 49681669 49681722 53 CACATTTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGA ..x...x......x........:::.:.:.:.:.x.:................ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -2331491 -91898911 +3090 chr4 + 190214555 47350188 47350187 47350230 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 20344192 NA +3100 chr4 + 190214555 47358354 47358353 47358405 52 TGTGTGTGTGTATATATATGTGTGTGTGTATATATGTATATATATATATATA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .:........:...:.....x:...........x...x..:.:...:.:.:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 2542754 NA +3135 chr4 + 190214555 47370358 47370357 47370415 58 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCGCTTGAGCCTGGAA chr4 + 94230402 76033206 76033205 76033263 76033206 76033205 76033263 58 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....x......:.........:.::.......:x.xx.x...x.:.....:..::... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -28662848 -65567554 +3409 chr4 + 190214555 47387338 47387337 47387413 76 GTTATGCACTTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTAGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x:.....x....:.:.........:x::........x.xx.x...x..........::.:..x.xx:..:..:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -28645863 -65584539 +4280 chr4 + 190214555 47389078 47389077 47389214 137 TTGCAAGATTGGGTGTTTGGTGGGCAGGCACACTTGGGGAAGTCA-CATCAAGTAATTTAT---CTCTTACACAAAG--------TTCCTCCCCCAGTTCCTCATTGGTTGAGTACTGTGGGGTTACAATTTTCCTGGACATCACCTAA chr4 + 94230402 13421524 13421523 13421672 13421524 13421523 13421672 149 TTGCAGTAGCGGGCGTCCTGCAAGCAGGAGCACATGCAGAAAACAGTGTTGCATCTTTTATGCCCTATTACCCAGTGCTTTTCTCTTCCTCCCCTGGTTCCTCATTGGCTGAGTACTTCAGGTTCACAATCTTCCTGACGCTCAGCTAA .....:x.x:...:..::x.:::.....x:...x..x:...:x..-::.::x:.xx.....---..x....x..:x.--------.........::............:........x::..x.:.....:......:xxx...x.... 45M1I15M3I13M8I64M 93/137 67.9% 149/94230402 0.0% 12/137 8.8% 33967554 NA +3449 chr4 + 190214555 47392314 47392313 47392375 62 AGGAAGCTTCTTTCTCCCTTCCACCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCA chr4 + 94230402 56633332 56633331 56633393 56633332 56633331 56633393 62 AGGAAGTTTCTTTCTCCCTCCCCCTCTCTCTTTTTTTTTTTTTTAATAGGAAAGCTATCTCA ......:............:..x.::.:.:..............:.x.x.:.:x..xx.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -9241018 -84989384 +3628 chr4 + 190214555 47398760 47398759 47398802 43 GTGAGGTTTTTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 27280218 27280217 27280260 27280218 27280217 27280260 43 GTGGAGTTTCTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTT ...::....:................................. 43M 40/43 93.0% 43/94230402 0.0% 0/43 0.0% 20118542 NA +3028 chr4 + 190214555 47400903 47400902 47400947 45 TTGTTCTTTTGTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 23104874 23104873 23104918 23104874 23104873 23104918 45 TTGTTCTTTTTTTCCTCTCTCTCTTTTTTTATTTTTTATTTCTTG ..........x...:.....:.:.......x......x...:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 24296029 NA +4233 chr4 + 190214555 47403585 47403584 47403715 131 TTTCGTCTAAAGAGAAACATTGGTTACTTCATTTTGCAAACCTACATGCCTTCTACACTGATTACAATTCTGTCCTGGGTGTCTTTTTGGATCAACTATGATGCATCTGCAGCCAGAGTCGCACTAGGTAA chr4 + 94230402 10947891 10947890 10948021 10947891 10947890 10948021 131 TTTGACTTAAGTAGACGTATGGGTTATTTTGCCATTCAGACCTACATTCCCTGCATCCTGACTGTTGTTCTGTCCTGGGTTTCCTTCTGGATCAAGAGAGACTCTACACCAGCCAGGACATCCCTCGGTAA ...x:::...:x...x::..x.....:..::::x.x..:........x..:.x:.:x....:.::x:.............x..:..:........xx:x..:x.xx.xx.......:::xx.x..x..... 131M 82/131 62.6% 131/94230402 0.0% 0/131 0.0% 36455694 NA +4387 chr4 + 190214555 47406666 47406665 47406884 219 TCTTTCTCTTTCACAGGAATCACGACAGTGCTTACAATGACAACCATCAGCACCCACCTCAGGGAGACCCTGCCAAAGATCCCTTATGTCAAAGCGATTGATATTTATCTGATGGGTTGCTTTGTGTTTGTGTTCCTGGCTCTGCTGGAGTATGCCTTTGTAAATTACATCTTCTTTGGGAA-----AGGCCCTCAGAAAAAGGGAGCTAGCAAACAAGACCAG chr4 + 94230402 10949906 10949905 10950124 10949906 10949905 10950124 219 TCTTTTTCCT-CTTAGGTATCACCACTGTGCTAACAATGACCACGCTGAGTACCATCTCCCGCAAGCACCTTCCACGTGTTTCCTATATCACAGCCATGGACCTCTTTGTGTCTGTGTGCTTCATCTTCGTCTTTGCAGCTCTCATGGAGTATGCTACACTCAACTACCT----GGTGGGAAACAAGAAGCCACTGGAGCACAGCAGCAGGAAAGCCAGACTGG .....:..:.-.x:...x.....x..x.....x........x..xx.x..:...xx.::.x.x:..xx...x...x:x:.::.:...:...x...x..x..:x.:.x.x..x:x.xx.....::.x..:..x..:x::.....xx..........:x:xx.x..:...x.----xx......-----.:...x:::..:x.x:.x...x:.x..:.x....::. 10M1D159M4D8M5I37M 132/214 61.7% 219/94230402 0.0% 10/214 4.7% 36456760 NA +3149 chr4 + 190214555 47407952 47407951 47408034 83 CATTGTGGTGTTTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGATGGGAGGATGGCTTAAACCCAGAAGGCAAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x......:x:.--......:...........::........x:xx.x.:.xx:...:..........x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -28625245 -65605157 +3366 chr4 + 190214555 47430832 47430831 47430893 62 TGCACCTGTAATCCTAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGTT chr4 + 94230402 76033205 76033204 76033266 76033205 76033204 76033266 62 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .....x....:.:.:.........::........x:xx.x.:.x.......:.....:..:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -28602373 -65628029 +3153 chr4 + 190214555 47468079 47468078 47468148 70 CGTGGTGGCACATGTGTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCGGGGG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGTGT--AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....::..:....--.:.:...........::........x.xx.x...x.x.........:.::. 17M2D51M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -28565118 -65665284 +3259 chr4 + 190214555 47482409 47482408 47482493 85 CCTGCAGCATTGATCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCT------CCTCCTCCTCCTCCTTCT chr4 + 94230402 44836676 44836675 44836766 44836676 44836675 44836766 91 CCCGCGGTACTGACCAGCTCCTTCTTCCTCTTCTCCTCCTTCACGTCCGTCTTCTTGATCTCTGCCTTGAAAGCCTCCGCCTCCCCGTTCT ..:..:.:.:...:.xx..:.............::..:.:..x:x::.x.......xx...::x:..------.....x.....:.x.... 67M6I18M 58/85 68.2% 91/94230402 0.0% 6/85 7.1% 2645733 NA +3041 chr4 + 190214555 47528449 47528448 47528534 86 GTAGTCCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 85834518 85834517 85834603 85834518 85834517 85834603 86 GTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCAC .....:::x.x.x.x.:.x::.x.....x.................:.xx:...:x.::.:::.:.:..x...:..:.x..::... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% -38306069 -55924333 +3079 chr4 + 190214555 47528459 47528458 47528531 73 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 + 94230402 85834542 85834541 85834614 85834542 85834541 85834614 73 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ....x.................:.xx:...:x.::.:::.:...:x:.:::...x...::.:.:...:.:... 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% -38306083 -55924319 +3242 chr4 + 190214555 47528459 47528458 47528531 73 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 + 94230402 39131745 39131744 39131817 39131745 39131744 39131817 73 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:..x...::.::x......x...x.x.......:x.....::.....x.:x:..:..x...x:......... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 8396714 NA +3292 chr4 + 190214555 47528460 47528459 47528533 74 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.................:.xx:...:x.::.:::.:...:x:.:::...x...::.:.:...:..... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -38306081 -55924321 +3044 chr4 + 190214555 47528461 47528460 47528537 77 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACACCAC chr4 + 94230402 39131745 39131744 39131821 39131745 39131744 39131821 77 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGC .:..x...::.::x......x...x.x.......:x.....::.....x.:x:.::..x...x:.....:...x.:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 8396716 NA +3201 chr4 + 190214555 47528462 47528461 47528534 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 85834541 85834540 85834613 85834541 85834540 85834613 73 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC .....x.................:.xx:...:x.::.:::.:...:x:.:::.:.x...::.:.:........ 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -38306079 -55924323 +3004 chr4 + 190214555 47528463 47528462 47528540 78 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACACCACATT chr4 + 94230402 39131745 39131744 39131822 39131745 39131744 39131822 78 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCT .:..x...::.::x......x...x.x.......:x.....::.....x.:x..::..x...x:...:.:..x..::. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 8396718 NA +3306 chr4 + 190214555 47528463 47528462 47528537 75 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACACCAC chr4 + 94230402 79265519 79265518 79265593 79265519 79265518 79265593 75 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACAC .............::........xx...:.:.:::.::::.....:::::.:.x.:....x.:.:.x....x... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -31737056 -62493346 +3010 chr4 + 190214555 47528464 47528463 47528534 71 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 85834541 85834540 85834611 85834541 85834540 85834611 71 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACAC .....x.................:.xx:...:x.::.:::.:...:x:.::..:.x...::.:.:.:.... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -38306077 -55924325 +3072 chr4 + 190214555 47528466 47528465 47528534 69 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 85834541 85834540 85834609 85834541 85834540 85834609 69 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATAC .....x.................:.xx:...:x.::.:::.:...:x:..:..:.x...::.:...:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -38306075 -55924327 +3165 chr4 + 190214555 47528468 47528467 47528533 66 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACA chr4 + 94230402 85834541 85834540 85834606 85834541 85834540 85834606 66 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA .....x.................:.xx:...:x.::.:::.:...:x...:..:.x...::..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -38306073 -55924329 +3396 chr4 + 190214555 47528470 47528469 47528544 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC-----CACATTGTCT chr4 + 94230402 85834541 85834540 85834620 85834541 85834540 85834620 80 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCT .....x.................:.xx:...:x.::.:::.:....x...:..:.x...:.....-----.....x.:.. 65M5I10M 55/75 73.3% 80/94230402 0.0% 5/75 6.7% -38306071 -55924331 +3063 chr4 + 190214555 47528480 47528479 47528531 52 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 + 94230402 85834541 85834540 85834592 85834541 85834540 85834592 52 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA .....x.................:.xx:...:x.:...:....:..x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -38306061 -55924341 +3166 chr4 + 190214555 47528485 47528484 47528534 50 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 79265519 79265518 79265568 79265519 79265518 79265568 50 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACAC .............::........xx...:....:...:.::.:.:..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -31737034 -62493368 +3278 chr4 + 190214555 47530398 47530397 47530465 68 TATTGAAATGATTATGTGGGTTTTTGTTGTTGTTGCTGTTGTTGTTCTTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 14999512 14999511 14999567 14999512 14999511 14999567 56 TATTTAAAT--TTATGTGGGTTTTT----------TTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTT ....x....--..............----------:..........x..x.................. 9M2D14M10D33M 52/56 92.9% 56/94230402 0.0% 12/56 21.4% 32530886 NA +3427 chr4 + 190214555 47530413 47530412 47530465 53 GTGGGTTTTTGTTGTTGTTGCTGTTGTTGTTCTTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 74136533 74136532 74136585 74136533 74136532 74136585 53 GCGGGGGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTT .:...xx...x........::........xx:..................... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% -26606120 -67624282 +3358 chr4 + 190214555 47561497 47561496 47561634 138 CAGTTCAATGACTTGTTCAAGGTCACATGCCAGTAGCTGACAGTTACTCATTAACCAAACATGGAGCTCATGTTTGCCTGGCTCCAAGCTTTTTATCCTGCACCTGCTACTGGACTAAGGAAATTTATTTTTCTTCTC chr4 + 94230402 7439655 7439654 7439769 7439655 7439654 7439769 115 CAGTTCAATGATTTGTTCAAGGTCACATACTAATTGCTGGCAG---------AGCTAAATAAAGTATCTAGGAGTATCT-GCTCTAACCAATACATCAT--ACTCATTACTGG-----------TTATTTTTCTACTC ...........:................:.:.:.x....:...---------.:.:...:.x:.x::::.x.xx.::..-....:..x.xx.x:...x.--..::::......-----------..........x... 43M9D27M1D19M2D12M11D14M 82/115 71.3% 115/94230402 0.0% 23/115 20.0% 40121842 NA +3048 chr4 + 190214555 47562838 47562837 47562880 43 TATATATACACACACACACACATATATACACAATGGAATCCCA chr4 + 94230402 67195546 67195545 67195588 67195546 67195545 67195588 43 TATATACACACACACACACACATATATATATAATAAATTCTCA ......:.....................:.:...::.x..:.. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -19632708 -74597694 +4919 chr4 + 190214555 47563580 47563579 47563701 122 GGTGCTACTGGCATTGAAGACCGTCTGCAGGAGGGAGTCCCTGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGACAGGGGACAAGCAGGAGACAGCTGTCAACAT chr4 + 94230402 70101554 70101553 70101675 70101554 70101553 70101675 122 GGGGCAACAGCAATTGAGGATAAACTACAAGACAAAGTGCCTGAGACCATAGAAACACTAATGAAAGCTGACATAAAAATTTGGATACTTACTGGGGACAAACAAGAGACCGCCATTAACAT ..x..x..x.xx.....:..:x:x..:..:..x::...x.....:x.:......:.x..xxxx.....x.:...x..:..:.....:..x..x........:..:.....x..::.:..... 122M 83/122 68.0% 122/94230402 0.0% 0/122 0.0% -22537974 -71692428 +3340 chr4 + 190214555 47572153 47572152 47572231 79 GGTGATGGTGCCAATGATGTTAGCATGATACAAGTGGCAGACATTGGGATAGGGGTCTCAGGTCAAGAAGGCATGCAGG chr4 + 94230402 70111617 70111616 70111695 70111617 70111616 70111695 79 GGTGATGGAGCAAATGATGTTAGTATGATACAAACAGCACATGTTGGTGTTGGTATTAGTGGAAATGAAGGTCTACAGG ........x..x...........:.........:::...x.::....x:.x..x:.:xxx..xx.x.....:x.:.... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% -22539464 -71690938 +3488 chr4 + 190214555 47580926 47580925 47581005 80 AGTGGTGTGGACCTGTGGCCCCAGCTATTTGGGAGGCTGAGGTAGGAGGATTGCTTGAGCCCAGGAGGTCTAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:--..x...:.::.......:...::........x:xx.x.:.x::.....:.....:..x.:.:.....:.. 8M2D70M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% -28452274 -65778128 +3130 chr4 + 190214555 47584347 47584346 47584428 82 CTTGCCAAAGGCATGTTTTTTTTGTTGTTGTTTTTTGTTTGTTTTTGTTGTTGTTGTTGTTTTTGAGACAGAGTCTTGCTCT chr4 + 94230402 67745284 67745283 67745365 67745284 67745283 67745365 82 CTTTTCAAAGGCGGGATTCATTTGTAGGGTTTTTTTGTTTGTGTTTGTTTTTTTTTTTTTAACTTAAACAGAGTATAGCTTT ...x:.......:x.x..:x.....x.xxx............x......x..x..x..x.xx:.x.:.......x.x...:. 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% -20160937 -74069465 +3002 chr4 + 190214555 47584356 47584355 47584410 55 GGCATGTTTTTTTTGTTGTTGTTTTTTGTTTGTTTTTGTTGTTGTTGTTGTTTTT chr4 + 94230402 59675241 59675240 59675295 59675241 59675240 59675295 55 GGCATACTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTACCGTTTTCCTT .....::.x..x.......................x.x..x..:::...x.::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -12090885 -82139517 +3025 chr4 + 190214555 47584364 47584363 47584414 51 TTTTTTGTTGTTGTTTTTTGTTTGTTTTTGTTGTTGTTGTTGTTTTTGAGA chr4 + 94230402 15853504 15853503 15853554 15853504 15853503 15853554 51 TTTTTTGTTGTTGTTTTTTGTTTTCTGTGGTTGTTTTTTTTTTTTTGAAGA .......................x:.x.x......x..x..x....x:... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 31730860 NA +3258 chr4 + 190214555 47606639 47606638 47606700 62 CCTTCCTTTCTTCCCTCCTTCCTTCCTTCCTTTCTTTTTCTTTCCTTTTTTCCTTCTTTCTT chr4 + 94230402 57538447 57538446 57538508 57538447 57538446 57538508 62 CTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCT .:..:::......x....:........:.:x..x....:::.......x....:..::..:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -9931808 -84298594 +3528 chr4 + 190214555 47607816 47607815 47607907 92 GTGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTAAACCCTAGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x.:....:.........::::........x.xx.x...x.....:.....x::..x.xx:..:..:..------..x..x...... 74M6D12M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% -28425388 -65805014 +3502 chr4 + 190214555 47613314 47613313 47613395 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGGTGGAGGTTTCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x..........:..:..x.xx:..:.x:.. 6M1D6M4D65M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -28419887 -65810515 +3209 chr4 + 190214555 47618679 47618678 47618748 70 CATGGTGGTGGGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x..:...:.........:.::........x.xx.x...xx:.x.........:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -28414518 -65815884 +3098 chr4 + 190214555 47621509 47621508 47621569 61 GTTTGTTGTTATTGTTTTGTTTATGTTTGGTTTTGTTTGTTTTGTTTTGCTACAAATTACA chr4 + 94230402 25538667 25538666 25538727 25538667 25538666 25538727 61 GTTTTTTGTTGTTGTTGTTTGTTTGTTTGCTTTTGTCTATTTTCTCCAGCTATAAATCACA ....x.....:.....x.x.x.x......x......:.:....x.::x....:....:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 22082842 NA +3066 chr4 + 190214555 47623064 47623063 47623106 43 CATAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATA chr4 + 94230402 27333486 27333485 27333528 27333486 27333485 27333528 43 CATACCCTCTCTCTCTCTCTCTCTGTGTATCTCTATACATATA ....x...................x.x.x........:..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 20289578 NA +3503 chr4 + 190214555 47623068 47623067 47623125 58 ACCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACAC chr4 + 94230402 60831525 60831524 60831582 60831525 60831524 60831582 58 acaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ..x.x...x.....x.............x.:.......:.:....:.:.:..:..... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -13208457 -81021945 +3049 chr4 + 190214555 47623071 47623070 47623116 46 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618362 4618361 4618407 4618362 4618361 4618407 46 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .......::..............x:....::......x.x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 43004709 NA +3224 chr4 + 190214555 47623071 47623070 47623123 53 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............x.x.......:.:....:.:.:.::..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -13208459 -81021943 +3674 chr4 + 190214555 47623075 47623074 47623127 53 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............:.:.......:.:....:.:....:..... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% -13208455 -81021947 +3591 chr4 + 190214555 47623077 47623076 47623129 53 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x...........x.:.:.......:.:....:......:..... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% -13208453 -81021949 +3542 chr4 + 190214555 47623079 47623078 47623145 67 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACACACACTCTCTCTGAATA chr4 + 94230402 60831530 60831529 60831591 60831530 60831529 60831591 62 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC-----TTCTAAATA ...x.....x.........x.x.:.:.......:.:...........:.....-----:...:.... 53M5D9M 51/62 82.3% 62/94230402 0.0% 5/62 8.1% -13208451 -81021951 +3118 chr4 + 190214555 47623085 47623084 47623134 50 TCTCTCTCTCTCTATATATATATATATATATATACACACACACACACACT chr4 + 94230402 85078499 85078498 85078548 85078499 85078498 85078548 50 TTTCACTCCTAATATATACAGATATCTATATATACACACACACACACACT .:..x...::xx......:.x....x........................ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -37455414 -56774988 +3010 chr4 + 190214555 47626956 47626955 47627003 48 ATTTCTATGTTTGTAGGTTGTTGTTGTTGTTGTTGTTGTTTTTTTTTT chr4 + 94230402 27786460 27786459 27786507 27786460 27786459 27786507 48 ATCTTCCTGTTTGCAGGGTATTTTTGTTGTTGTTGTTGTTTATTTTTT ..:.::x......:...x.:..x..................x...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 19840496 NA +3269 chr4 + 190214555 47673245 47673244 47673318 74 GTGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.:..:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -28359959 -65870443 +3004 chr4 + 190214555 47682441 47682440 47682475 35 CAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGA chr4 + 94230402 75300455 75300454 75300489 75300455 75300454 75300489 35 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ...................:.:............. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -27618014 -66612388 +3183 chr4 + 190214555 47682446 47682445 47682483 38 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGACAGAGATT chr4 + 94230402 75300456 75300455 75300493 75300456 75300455 75300493 38 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATT ..............................x...:... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -27618010 -66612392 +3447 chr4 + 190214555 47731733 47731732 47731811 79 GTGGCGCACACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......::..........::........x.xx:x...x::...........:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -28301468 -65928934 +3520 chr4 + 190214555 47761971 47761970 47762060 90 TGTATATATATACACACAAATATATACATATATACACACATATATATACACATATTAATGTATATATACACATGTATACACACATATATG chr4 + 94230402 23247723 23247722 23247807 23247723 23247722 23247807 85 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACAC-----AAGGAAAAAAGTTACATGAATAAATATATATATG ...:.:...::.......xx...:x......:..........:.:.:....-----..x.x.x.x.xx:.....x...x.:.:....... 51M5D34M 62/85 72.9% 85/94230402 0.0% 5/85 5.9% 24514248 NA +3671 chr4 + 190214555 47761993 47761992 47762076 84 TATACATATATACACACATATATATACACATATTAATGTATATATACACATGTATACACACATATATGCACACATACATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x...x.:.::x::::.:.:.:.:::::..........x::.....:.....x.:...::.x..............:.:... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -38072540 -56157862 +3277 chr4 + 190214555 47781798 47781797 47781880 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCGTGAACCTGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........::::........x.xx.x...x.:.x......::....x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -28251399 -65979003 +3015 chr4 + 190214555 47782378 47782377 47782425 48 CCATCTCAAGAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAGACAAGA chr4 + 94230402 21345702 21345701 21345749 21345702 21345701 21345749 48 CCACACCAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGACAAGA ...:x:..::........:......:........:..:.::....... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 26436676 NA +3097 chr4 + 190214555 47805007 47805006 47805065 59 GCGCCTGTAGTCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........:x........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -28228199 -66002203 +3035 chr4 + 190214555 47810166 47810165 47810207 42 TTTTGTTTGTTTGTTTGTTTTTGGTGTTTTGTTTTGTTTTGA chr4 + 94230402 34521147 34521146 34521188 34521147 34521146 34521188 42 TTTTGTTTGTTTGTTTGTTTTTTGGGTTTTTTTTTGCTCTGA ......................x.x.....x.....:.:... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 13289019 NA +3460 chr4 + 190214555 47818732 47818731 47818815 84 ACGTGGTGGTGCACTCCTGTGGTCCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCACTGGAGCCCAGGAAGTCAAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::.........x--...:..:........:..::........x:xx.x.:.x....x..:.....:.:x.:x:.....:.. 15M2D67M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% -28214464 -66015938 +3184 chr4 + 190214555 47844989 47844988 47845038 50 TCTGTCTCAAAAAAAAAAAAAAAAAAAGAATATGACACTAAATTTTGAAT chr4 + 94230402 26392949 26392948 26392998 26392949 26392948 26392998 50 TCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACATTTTGGAT ...x.........................xx....x.::.x......:.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 21452040 NA +3110 chr4 + 190214555 47859843 47859842 47859899 57 AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAAGTAGAAATACCAC chr4 + 94230402 77634780 77634779 77634836 77634780 77634779 77634836 57 AAAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAAGTCATACAGAAATCAC ......x:x..............:.......:.........:xx:..x.:.x.:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -29774937 -64455465 +3063 chr4 + 190214555 47859844 47859843 47859896 53 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAAGTAGAAATAC chr4 + 94230402 26426467 26426466 26426519 26426467 26426466 26426519 53 AAAAAAAAAATCAGAAAGCAACAGAAACAAACAAACAAAAAAAATGGGAGCAC ..........xx.:...:x..x.:...................:.:.:.::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 21433377 NA +3371 chr4 + 190214555 47865885 47865884 47865958 74 GTGCACCTGTAGTCCCAGCTACTAGGAAAGCTGAGGTGGGAAGATCACCTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.:..:......x:xx.x::.x...:...:..::.:..x.:x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -28167319 -66063083 +3972 chr4 + 190214555 47869095 47869094 47869167 73 TGTGCCTGTAGCCCCAGCTACTTGAGAGGCTGAGGCGGGAGGATCACTTGAGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.....::............:........x.xx.x.:.x.......:.....:..:.:x:.....:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -28164110 -66066292 +3653 chr4 + 190214555 47880404 47880403 47880461 58 TGACAGAACTGAGATCCAGTCTCAAAAAAAAAAAAAAAAAAAAAA--GGTTAAAAAGATA chr4 + 94230402 54130144 54130143 54130203 54130144 54130143 54130203 60 TGACAGAACTGAGATTTAGTCTAGAAAAAGAAAAGAAAAAAAAAATGGGTGGAGAAGATA ...............::.....x:.....:....:..........--...x:.:...... 45M2I13M 49/58 84.5% 60/94230402 0.0% 2/58 3.4% -6249740 -87980662 +3032 chr4 + 190214555 47880784 47880783 47880858 75 AAACAGTAAACCTAATTAATGAGTAAAAAAAAAAAAAAAAAAAAAAACGCAAAAAGGAACAGGAAATTAAACACT chr4 + 94230402 35799138 35799137 35799212 35799138 35799137 35799212 75 AAAAGTTAAAACTCATTACAACCTAAAAAAAAAAAAACAAAAAAAAACCCCCAAAAAAACAGGGAAATACAAATT ...x:x....x..x....xx:xx..............x..........x.xx...::......:..x..x.x.:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 12081646 NA +3047 chr4 + 190214555 47909323 47909322 47909380 58 TACAAAAGTAACCGTCTAGTCTCCTCAGAATTTTCCTGCTTTTACAGAGAAAATGAAA chr4 + 94230402 14764948 14764947 14765005 14764948 14764947 14765005 58 TACAGAATTACCTTTCTGGTTTCTGCAGAATGTTCCTGTTTTTACAAAGAGAGTCAAA ....:..x..x.:x...:..:..:x......x......:.......:...:.:.x... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 33144375 NA +3056 chr4 + 190214555 47932210 47932209 47932276 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -28101001 -66129401 +56183 chr4 + 190214555 47936524 47936523 47937845 1322 TGTTTCAGTTTCTGCTGCATGGACTCATACTCAGCCAAGATTCGGGCAAACCTGGTTTGCAGGAGGTCTACTGACCCCTCCATTCGAGTAACCTTCTCTTCAAGATCTTTAGGATCACTGCCAGCATTTGCAATGTTTAGATCCAGTAGACCATCTTTCATTAAAATCTGCTTCCCTTTCTCTTCCAGCATAGTTTTGGCATCTGGGTACTCAGTTAGAGCTTCCATGAGGTCATCTTTTGAGAGACAGAACAGGTCTGAGTAGCCAATACTTTTAATATTGGCCGTTCTTCGATTGCCAGCTTTGCTCCCTTTAATGTTAAGAATGCTGATCTCACCGAAGTAGCTGCCATCGCTCAATACCACAAACTGAGTGACTCCATCATCTGCCACCACAGCGAGTTTGCCTTCCTTGATAATGTACATCTCTCGTCCGATATCCCCTTTCTTGCAAATATAATCTCCAGGACTGTAGACTTGGGGTTGCAATTTCAAGACCAACTCCACCAACAGACCAGCTTCACAATCAGCAAAAATGCGTACCTTTTTTAATGTGTCTAAGTGAACGTTGATGGCAATTTCTGCTCTTAGTTTATCAGGTAGATACTTTAAGACTTCTTTCTCATCAACTGTTTTTTTGTTGGTCCACAGGTAGTCAAACCATTTAATAACCCTCTTTTCCATATCTTTGCTTACATTTCGAAAATGCATATATTGCTTGATAGCATCAATTCTTGCTTGAAATTCTGCTCTGGCTGCATTCATGTTGGAAATCATAGAACCTATGTTACCAACGATGGTAGCAAAAATTAACACTCCAATTAGGAAATCAACCACCACAAAGACATACTCAGAATCCCTCACGGGAGGGGGTGTTTCACCAATGGTAGTCAAAGTCAGTGTAGACCAGTAAAGGCTGTATACGTATTTTCTAGCCAAACGGCCAAATTCAGGATCATTAATATCAGGGTAGACCCATGTATCATTTCCAAATCCAATAGCTTTAGAAATAGAGTAGAACACACATGCATTCCAGTGGATAATGATGACGATATACATAACAAGGTTGGAAATCCTGAAGATGTTTGGATAGTTTGTCCTTGTTTCTGTTCTCTGGAAGAACTCAAACATACGAGAGAACCGTAACAACCTGTTTAATCTAATTTCTGGATAGTTCCACCCTAACTTAAAATACAGCAAATCAGTTGGTATCAGTGACAGAACATCAAGTTTAAATTGCAAGTTGGATTTATATTTATTTATGAGTTTAAGTTCT-----TCCTTTACCAGCAGTCCTTGTTCTAGGTAACCTAAAATAGAAAATAA chr4 + 94230402 11001900 11001899 11003221 11001900 11001899 11003221 1322 TGCTTGAGCTTCATCTGGGCATCACTGTACTCTGTCAGGAGCCGGCCAAGGCGAGTGTGAAGTGTGTCCAGGTTCAAGGTCAGTCTGTCCAGCTTTTCTTCCACACTCTTCCCTTCCATGCTTTCTTCTTCAGCTGACTCATCCAGTAGGCCTTCCTTGATGAGGATCTCCCGGCCACGCTCCTCCAAGACCTTTTTGGCATCAGGATACTCTGTGACCACTTCCATCAGATCTTCCTTTGACAGGCAGAAAAGATCAGAGTAGCCCAAGCTACGGATGTTGGCCGTGCGCCTGTTGCCCATTTTGCTCCCTTTAATGTTCAGGATGCTGATCTCACCAAAGCAGCCCCCTGCCGTTAGCAAAGCATATTGTGTTGTTCCATCATCTGCCACCACAGCCAGCTTCCCCTCCTTGATGATGTACATCTCTTTTCCAATATCTCCTTTCCGGCAAATGTAATCCCCTGGACTGAACACCTGAGGGCGAAGCTTCAGCACCAGCTCCACCAGTAGACCTGCCTCACAGTCCTGGAAAATCCTCACCTTCTTCAGCGTCTCCAGGTGAACGTTGATGGCAATCTCTGCCCTTAGCTTATCAGGGAGACTCTTGAGAACTTCCCGCTCATCTACTGCCTTCTTGTTGGTCCACAGGTAATCAAACCACTTGATGACTTTGGTCTCCATGTCTTTGCTCACCTTGCGGAACTGCATGTAGTGTTTAATGGCATCAATTTTTGCCTGGAACTCTGCTCTGGTGGCATTCATGTTGGATATCATGGACCCTACGTTCCCCACAATGGTGGCAAAGATGAGGACACCGATGAGGAAATCAAAGATCACAAAGAGGTATTCTTCATCGCGCACAGGAGGAGGGGTCTCTCCGATGGTAGTCAAAGTCAATGTAGACCAGTAGAGACAGTAAACATACTCCCGGGTGAGATACCCATATTCAGGGTCTGTGACATTGGGATAGACCCAGCTATCTTCTCCAAAGCCTATGGCCTTGGAGATGGCATAGTAAATGCATGCATTCCAGTGGATGATCACCAGGATATAAAGAACCAAGTTGCTGATGCGGAAGATGTTGGGGTAGCTGGTTCTGGTCTCTGTCCTGTCAAAGAACTCAAACATGCGGGAGAAGTGCAGCAGCCTGTTGAATCGCAGCTCAGGGTGGTGCAATCCCACAGCAAAGTATGCCAGGTCTGTGGGCAGGATGGAGAGAACATCCAGCTTGAACTGTAAGGTGTAGATGTAGTTATCC-----CGTAACTTCTTCAGGTCCTTAACCAGGAGGCCCTGTTCCAAGAAACCTAACAGAGAAGGGAA ..:..x..:...xx...x:::xxx:::.....x.:..:..x:...x...:x.x:..x..x..x:x...:.xxxx.xxxx:..x..x:x:x.x...:.....x.x.:::..xxxx..xx...:xx.x.:.x..::xxx:xx.........:..x..:..x..x.::....x.:xx..x:x...:....:x.:xx..........x..:.....x..x.xx:.......x..:..x..:.....x..:.....x..:..x........x.x:..x:x:..:........x.x:.x:.....x::..................x..:..............:...:...:x..xx.xx.:.::.xx:..x.:..x..x::.....................x..:..x..:........:............:x...:.....:......:x......:.....:..x......x.x..:..:..x:.x.::....:x....:........::.....x..:.....:..xxx:.....x.x:.....:..:.::..x..:.:..................:.....:.....:........x...:x...x.::.....::x......x....::..:.................:........:..:..:..::.xx.:.....:........:..x..x..:..x.....:..x..:..:..:.........:....:..:..:..........:x..............x.....:..x....:...x..x..:.....:.....:..x.:x..x..:..x..........xx.:........x:..:..xxx...x.x...:.....:..x..:..x..:................:............:..:.x...x..:..:.::.x:.:x.:.::x...x.......:..xx.:.:..::..:........xx....x.:......x..x..:..:..:..:..:.x:...x.x.::.................:..x.:x.x......x.x...x.:....xx:..x.x.........x..:...:.x..:..x..:.....:..x.x:..............:..:.....x:.:.:..:......x....xx.x:..x..:.:..x.x.:..:.xxx:...:..::x..::..x..x..:.xx.xx..x........x..:..:..:..:...x..x.xx.:..x....::-----:x...x....-----.....x.....x..x..:.....:.:.x.......x.x....::x.. 1260M5D10M5I47M 918/1317 69.7% 1322/94230402 0.0% 10/1317 0.8% 36934624 NA +3038 chr4 + 190214555 47938971 47938970 47939073 103 AGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGGAAAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGA---AGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ........:.---..xx.x.:.....:...:.........x....:xxx::..xx:.:.x:..:x.x.:.:.:x:::..:...:....:..:....::..x.. 10M3D90M 63/100 63.0% 100/94230402 0.0% 3/100 3.0% -3209408 -91020994 +3430 chr4 + 190214555 47947530 47947529 47947612 83 CGTGGTGGCTCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCATTTGATCCCGGGAGATGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:x....--....:.:...........::........x.xx.x.:.x..:....x...:.:..x.xx:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -28085667 -66144735 +4066 chr4 + 190214555 47952232 47952231 47952310 79 GTGGTGCACACATGTAGTCCCAGCTACCTGGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:........:..::........x.xx.x...x................x:xx:..:..:.. 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% -28080969 -66149433 +4097 chr4 + 190214555 47957463 47957462 47957562 100 ATAAAATGTTAGCCCAGAGTGGTGATGTGCACCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGTGGATCACTTGAGCTTTGGAGGTTGAGGCTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATACACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x.x.:::x..x.......-----...x......:...........:x........x.xx...:.x.......:.::x.:..x..x:.....:.. 24M5D71M 69/95 72.6% 95/94230402 0.0% 5/95 5.3% -28075720 -66154682 +3752 chr4 + 190214555 47967163 47967162 47967232 70 CATGGTGGCGAGCACCTGTAATCCCAGCTACTTGGAAAGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x....:.:...........:..:......x.xx.x...x.............:.. 10M2D58M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% -28066034 -66164368 +3259 chr4 + 190214555 47967842 47967841 47967920 79 GTGGTGGGTGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCACTTGAACCGGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--...:..:...........::........x.xx.x:..x..........x:.:..x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -28065359 -66165043 +3012 chr4 + 190214555 47971129 47971128 47971207 79 ATTTGTAGGAAATATACATATATATGTAAATATCTATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTGCGTA chr4 + 94230402 48134238 48134237 48134316 48134238 48134237 48134316 79 ATTTAAAGGCAATATCCATTTACATGTAAAACAATATGGTTGAGTGTGTGTTCATATGTGTATGTTTGAGGAGGGTGTA ....:x...x.....x...x..:.......xxxx...:x...x........x::.:.....:...x..x.xx.x.:... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% -163109 -94067293 +3672 chr4 + 190214555 47971754 47971753 47971836 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........x.::........x.xx.x...x..........::.:..x.xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -28061443 -66168959 +3158 chr4 + 190214555 47976135 47976134 47976213 79 ATTTACTTTCATATGTATATATATATATATAT--ATATACACATACATATATATATACATATATATGTATATATATATATA chr4 + 94230402 85834534 85834533 85834614 85834534 85834533 85834614 81 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...:.:..x::.x...:.:.:.:.:.:.:...--..:..x:.........:..x......:.x....:.:.:...:.:.:. 32M2I47M 53/79 67.1% 81/94230402 0.0% 2/79 2.5% -37858399 -56372003 +3260 chr4 + 190214555 47976174 47976173 47976295 122 CATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATATATATATATA chr4 + 94230402 91738173 91738172 91738294 91738173 91738172 91738294 122 CATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATA ....:.x....:.x.x.x...:xxx.:.....x....:.x:x.x.:::x.xx.....x:..::........xx...x.x.x::x....x.x...:.....x.x.:..:..:..:x:...... 122M 76/122 62.3% 122/94230402 0.0% 0/122 0.0% -43761999 -50468403 +3382 chr4 + 190214555 47976174 47976173 47976295 122 CATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATATATATATATA chr4 + 94230402 91734575 91734574 91734696 91734575 91734574 91734696 122 CATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATA ....:.x....:.x.x.x...:xxx.:.....x....:.x:x.x..::x.xx.....x:..::........xx...x.x.x::x....x.x...:.....x.x.:..:..:..:x:...... 122M 77/122 63.1% 122/94230402 0.0% 0/122 0.0% -43758401 -50472001 +3411 chr4 + 190214555 47976175 47976174 47976255 81 ATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACA chr4 + 94230402 85834534 85834533 85834614 85834534 85834533 85834614 81 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x...x.:.:.x.:::.:.:.:...:.:...xx..:..x:.........:..x......:.x....:.:.:...:.:... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -37858359 -56372043 +3280 chr4 + 190214555 47976257 47976256 47976337 81 ATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATATA chr4 + 94230402 85834534 85834533 85834614 85834534 85834533 85834614 81 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x...x.:.:.x.:::.:.:.:...:.:...xx..:..x:.........:..x......:.x....:.:.:...:.:.:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -37858277 -56372125 +3142 chr4 + 190214555 47976272 47976271 47976353 82 CATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATATATATATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ...::...:x.x.x..:....::.x.x......:...::.....x.xx..:x.:.:....:....:::......x.:.x... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -28400585 -65829817 +3023 chr4 + 190214555 47976315 47976314 47976368 54 ATATATATGTATATATATATATACACATATATATATATATGTATATGTGTTTAT chr4 + 94230402 76709593 76709592 76709646 76709593 76709592 76709646 54 ATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTAT .........:..:.:.x....:.x:...x:.:..:...:.....x......... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -28733278 -65497124 +3107 chr4 + 190214555 47984614 47984613 47984684 71 CCATCTCAAAAAAACAAACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACACACA chr4 + 94230402 78347560 78347559 78347630 78347560 78347559 78347630 71 CCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ....xxx...x..xx..........:x......xxx.:.:.xx..:.....:.:..............x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -30362946 -63867456 +3344 chr4 + 190214555 47984619 47984618 47984680 62 TCAAAAAAACAAACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::.....:.x...x.....:...............:.:..:.:...:.:.x.:.::.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 46489625 NA +3403 chr4 + 190214555 47984620 47984619 47984680 61 CAAAAAAACAAACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACA chr4 + 94230402 78347570 78347569 78347630 78347570 78347569 78347630 61 CAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ...x...........:x...x..xx..x.:.xx..:......................x.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% -30362950 -63867452 +3300 chr4 + 190214555 47984628 47984627 47984686 59 CAAACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACACACACA chr4 + 94230402 51472489 51472488 51472547 51472489 51472488 51472547 59 CAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATA ....:.x.....x:......:..x.....:.......x.....:.:.:..x:.....:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -3487861 -90742541 +3195 chr4 + 190214555 48000119 48000118 48000190 72 AAATAAAGCAAAAAGAGAT----------AAAACATTGGAATCTTAGTAACTCATGGAACCATATTAATTGGATCAACATGT chr4 + 94230402 10175811 10175810 10175892 10175811 10175810 10175892 82 AAATATAGCATAGAGATACCTTCTTTGCAAAAATACAGGAATATCAATAACTCATGGAACCATATTCACAAAATCAAAATGT .....x....x.:...x.:----------....:.:x.....x.:.:...................x.:x::.....x.... 19M10I53M 55/72 76.4% 82/94230402 0.0% 10/72 13.9% 37824308 NA +3526 chr4 + 190214555 48001339 48001338 48001411 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAAGAGAATCACTTGAATCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x:xx.x...x........:.::.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -28031866 -66198536 +3083 chr4 + 190214555 48012717 48012716 48012765 49 AAAGACCAAAACAACAATAAAAAACAGACAACAACAACAAAAAACAGTT chr4 + 94230402 82706034 82706033 82706082 82706034 82706033 82706082 49 AAAAATTAAAACCAAAATAAAAACCAAACAACAACAACAAAAAATTGTT ...:.::.....x.x........x..:.................:x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -34693317 -59537085 +3055 chr4 + 190214555 48018980 48018979 48019039 60 AACTTCCATGAAGAAAAAGTTAATTTCATACTTTGGTTTTGACTTTTTTTTGTTTTTTTG chr4 + 94230402 29671914 29671913 29671973 29671914 29671913 29671973 60 AGCTTTCACAGAGAGATATTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTG .:...:..:::...:.x.x...x...:....x:.x......::............x.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 18347066 NA +3894 chr4 + 190214555 48022848 48022847 48022930 83 CATGGTGGTGCATGCCTGTGGTTCCAGCTACTTGGGAGGCTGAGATGGGAGGATCATTTAAACCCAGGAGGTCAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--...:..............::........x:xx.x.:.x..:..:.......:..x.:x:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -28010349 -66220053 +3194 chr4 + 190214555 48022988 48022987 48023106 119 AGAAAAAAAAGAAATGAAAATTTGCAGCAGTTAGGATATTTAGTTTTGACTTTGAGTTTATTCTGGATTTCTATTTCTTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTGTGGAGATCTC chr4 + 94230402 25355349 25355348 25355447 25355349 25355348 25355447 99 AGAAACAAAAGGAATAAGAA---------------ATACTTCTTTCTGAAAGTAAA---ATTGTAGAA--CTATTTTTTTGTTTTGTTTTGTTCTTGTTTTTGCTTGTGAGATAATTCC .....x.....:...:.:..---------------...:..xx..:...xxx.:.:---...x.:..x--......:................:.........:..x..x.:x:..::. 20M15D21M3D9M2D49M 73/99 73.7% 99/94230402 0.0% 20/99 20.2% 22667639 NA +3139 chr4 + 190214555 48041563 48041562 48041634 72 TTCTCCAAAAAACAAAAGAAACCAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAACCTCTACATTACCTCTAG chr4 + 94230402 58446034 58446033 58446105 58446034 58446033 58446105 72 TTTTCTAAGCTAAAATAGCAACTTTCAAAAAGAGAGAGAGAAGGAGAGAGAGAACAAGGACATTCCCTCTAG ..:..:..:xx.x..x..x...:xxx...............::........:...xxxx.....x....... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -10404471 -83825931 +3521 chr4 + 190214555 48044139 48044138 48044221 83 CATAGTGGCAGGCGCCTTTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--..:.x.x..:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -27989058 -66241344 +3367 chr4 + 190214555 48050490 48050489 48050567 78 CTGAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAGAAAAGAAAAAAAAATAAAGAAGAAAAGAAAAGATAAGAT chr4 + 94230402 28873439 28873438 28873516 28873439 28873438 28873516 78 CTGAAGAAAAGAGTAGGGAGGAAGAAATGGTATTAAAAGTAAAATAAAAAAAAAAGAGAGTTAAGGAAAAGATGGGAT .....:....:.:x..::..:......x::x.xx.....x...:x........x.:...:xx..:........::... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 19177051 NA +3037 chr4 + 190214555 48063819 48063818 48063893 75 CTAGAATGTTTTCTTTCTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTGACAGAGTTTCAC chr4 + 94230402 52884631 52884630 52884705 52884631 52884630 52884705 75 CTAGAACTTTCTACTTCATAGTTTTTTTTTCTTTTTCTTTTTTCCTTTCTTTATAGTTTGTCCTCAAAGATTTGC ......:x..:.x:...x.xx....:................:::.......x.xx...x.:xx..:..x..::. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -4820812 -89409590 +3425 chr4 + 190214555 48104541 48104540 48104622 82 TTTATATATATAATATATAATATATATATATAATATA-----------TATATTATATATATATATAGAGAGAGAGAGAGAGAGAGAGTCCAT chr4 + 94230402 84631399 84631398 84631491 84631399 84631398 84631491 93 TTTATGCATAATTTTCATAATTTAGATGTAGAAAATGCAGGCTTGGTCTATACTATATATATATATAGAGAGAGAGAGAGATACAGTGACTAT .....::...xxx.x:.....x..x..:..x..x..:-----------....:............................x.x..x.x.:.. 37M11I45M 63/82 76.8% 93/94230402 0.0% 11/82 13.4% -36526858 -57703544 +3111 chr4 + 190214555 48120095 48120094 48120164 70 ACACAAATATACGTATACATACACATACATATGTATATACATGTGTATATATGTATATATGCATATATAT chr4 + 94230402 22600198 22600197 22600267 22600198 22600197 22600267 70 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGT .....x....x.::..:..x......:....::x.x...::.:.:.x.:.:...:.........::.::. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 25519897 NA +3370 chr4 + 190214555 48120153 48120152 48120219 67 ATGCATATATATGTATATACGTATATGTGTATATATACATACACACATATATACGTATATATGTACA chr4 + 94230402 61270775 61270774 61270841 61270775 61270774 61270841 67 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...x......x........:......::.:.::..:...x....x...:....x...:.:.xx.:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -13150622 -81079780 +3119 chr4 + 190214555 48120217 48120216 48120283 67 ACATATATACGTATATATGTATATACGTATATGTGTATATATACATACACACATATATACGTATATA chr4 + 94230402 61270769 61270768 61270835 61270769 61270768 61270835 67 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...xx:..:x:.....x........:......::.:.::..:...x....x...:....x...:.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -13150552 -81079850 +3272 chr4 + 190214555 48126463 48126462 48126518 56 TTATTCAAGTGTCAACAACTTTGTGTGTGTGTGTGGTTGTTTGTTTTGTTTTGTTT chr4 + 94230402 63214995 63214994 63215050 63214995 63214994 63215050 56 TTCTCCAAGTGTCAATAATCTTTGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTT ..x.:..........:..::..xxx...x.x...x..................... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -15088532 -79141870 +3478 chr4 + 190214555 48132514 48132513 48132621 108 TTTATATGTATACAAATATACA----------CATACACACACTCCCTTTGAG--AGCTTATTTATACATATAAACTCATTTATATATGTGTGTATGTGTGTGTGTATATATATTTAAGG chr4 + 94230402 72529189 72529188 72529305 72529189 72529188 72529305 117 TTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAG-TCATTCACATCTATTACAT--TTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGG ..:...::......x.....:.----------...::.:.x.x.::...x.x.--..-.:...:.:.:x...x.xx.--......:.:......:............:......x..... 22M10I21M2I2M1D19M2D41M 78/105 74.3% 117/94230402 0.0% 15/105 14.3% -24396675 -69833727 +3478 chr4 + 190214555 48132514 48132513 48132621 108 TTTATATGTATACAAATATACA----------CATACACACACTCCCTTTGAG--AGCTTATTTATACATATAAACTCATTTATATATGTGTGTATGTGTGTGTGTATATATATTTAAGG chr4 + 94230402 72525616 72525615 72525732 72525616 72525615 72525732 117 TTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAG-TCATTCACATCTATTACAT--TTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGG ..:...::......x.....:.----------...::.:.x.x.::...x.x.--..-.:...:.:.:x...x.xx.--......:.:......:............:......x..... 22M10I21M2I2M1D19M2D41M 78/105 74.3% 117/94230402 0.0% 15/105 14.3% -24393102 -69837300 +3019 chr4 + 190214555 48132565 48132564 48132619 55 TATACATATAAACTCATTTATATATGTGTGTATGTGTGTGTGTATATATATTTAA chr4 + 94230402 27325504 27325503 27325558 27325504 27325503 27325558 55 TATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGA ......:x.:....:.xx...:.:.................:::..:....x.:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 20807061 NA +4153 chr4 + 190214555 48132806 48132805 48132978 173 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCC---AGCCTG----------GGTGACAGAGCAAGACT-------------CTGTCTAAAAAAAAAAAAAAAGTCTCATACTTAAATCCTG chr4 + 94230402 76033197 76033196 76033392 76033197 76033196 76033392 196 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGACAGCGGGTCTGATAGTTAGGTCTTG ..::....--...:.x......:.........:.::........x.xx.x...x.............:..x.xx:..:..:..-:.xx...x::.:x..x:x..:::x..---......----------......x.x:x.:::..-------------......:.::.:.:.x.:x::....x...x...::..:.. 8M2D73M1D26M3I6M10I17M13I40M 113/170 66.5% 196/94230402 0.0% 29/170 17.1% -27900391 -66330011 +3022 chr4 + 190214555 48133724 48133723 48133769 46 TATTTATTTGTGTGTGTGTGTATGTGTGTGTATTTATATATATATA chr4 + 94230402 85834533 85834532 85834578 85834533 85834532 85834578 46 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATA ....:........x.......:............x..:..x::... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -37700809 -56529593 +3213 chr4 + 190214555 48160707 48160706 48160823 117 ACAGAGTAAGACTCTGTCTCCAGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAA---AAGAAAAAAAGA----------------AAGAAAGAAAAGAAAAGAAGAAAGAAAGAGAAAGAGAAAGAGAGAGAG chr4 + 94230402 57629651 57629650 57629786 57629651 57629650 57629786 136 ACTAATTAAGAACATATTCACAGCAAGAATAGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAG ..x:.x.....x:x.:.::x...x..:..x.:x:..x:.:x:..x....:.....x:---...x.xx.:...----------------..:.......x......:.::.......:........:..::.:.:.. 57M3I12M16I48M 77/117 65.8% 136/94230402 0.0% 19/117 16.2% -9468944 -84761458 +3039 chr4 + 190214555 48160710 48160709 48160780 71 GAGTAAGACTCTGTCTCCAGAAAAAAAAAAAGAAAGAAAGAAAGAA--AGAAAGAAAAGAAAAAAAGAAAGAA chr4 + 94230402 16379592 16379591 16379664 16379592 16379591 16379664 73 GAGAAGAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAGGA ...x.::..::....:...:....x:.....x...:x.:.......--.....x..::...:..x.x....:. 46M2I25M 51/71 71.8% 73/94230402 0.0% 2/71 2.8% 31781118 NA +3094 chr4 + 190214555 48160726 48160725 48160815 90 CCAGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAGAAAGAAAGAAAAGAAAAGAAGAAAGAAAGAGAAAGAGAAAG chr4 + 94230402 78784179 78784178 78784268 78784179 78784178 78784268 90 CCAACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGG ...:x....:::.xx..::.....x...:x.:.:......:.x....x........:..::x..x.xx:..::...::...::x.:..:. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% -30623453 -63606949 +3042 chr4 + 190214555 48160732 48160731 48160803 72 AAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAGAAAGAAAGAAAAGAAAAGAAGAAAGAAAG chr4 + 94230402 42024552 42024551 42024623 42024552 42024551 42024623 72 AAAATAAGAGGGAGAAATGTGGAGGGAGAAAATGGAAAAACAGAAATAAAGAAAACCAAGGGAAATGGAAAG ....x..:..::.....x:x:..::..:.:..x:......x.....x........xx..:.:.:.x:..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 6136180 NA +3064 chr4 + 190214555 48167235 48167234 48167286 52 TTTTATATATACATACACAAACACATATACACACATATAGACACACACATAT chr4 + 94230402 50629529 50629528 50629580 50629529 50629528 50629580 52 TTTAATATATACCTATATAAATATGTATACACACATGTAAATACACAAACAT ...x........x..:.:...:.::...........:..:.:.....x.:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -2462294 -91768108 +3757 chr4 + 190214555 48176591 48176590 48176664 74 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCACTTGAACACAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........::::........x.x..x...x.........x...:..x:xx:..:..... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -27856613 -66373789 +3112 chr4 + 190214555 48179339 48179338 48179400 62 TATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823268 7823267 7823329 7823268 7823267 7823329 62 TACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:.........:.:......x.:.:x.x..x.xx.x...:...x..:.............. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 40356071 NA +3067 chr4 + 190214555 48179341 48179340 48179405 65 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTCAAGA chr4 + 94230402 33251003 33251002 33251067 33251003 33251002 33251067 65 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGA .:.:.:.:.:.:.......:.:........x.xx.x..x...x.....x..x.......x..... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 14928338 NA +3017 chr4 + 190214555 48179356 48179355 48179394 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 23386730 NA +3490 chr4 + 190214555 48181532 48181531 48181615 84 ACATGGTGGTGCGCACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.......--..x......:........:..::........x.xx.x...xx:........::.:..x:xx:..:..:.. 12M2D70M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -27851664 -66378738 +3049 chr4 + 190214555 48191811 48191810 48191881 71 GTGCACCTGCAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGGATTGCTTGAACTC---AGTTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..:...:.........:.::...:....x.xx.x.:.x::.......:.---..:.:x:.....:.. 56M3I15M 50/71 70.4% 74/94230402 0.0% 3/71 4.2% -27841393 -66389009 +3552 chr4 + 190214555 48203226 48203225 48203307 82 ACAGTGGTGTGCACCTGTAATCCCAGCTACTGGGGAGGCTGAGGCATGAGAATCGCTTTAGCCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........--...x....:.:.........x.::........x.x..x...x.:...x.:..::.:..x.xx:..:..:.. 9M2D71M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% -27829972 -66400430 +3081 chr4 + 190214555 48206959 48206958 48206996 38 AAAAACAAAAACAAACAAACAAAAAAACCCCACAAATA chr4 + 94230402 45330851 45330850 45330888 45330851 45330850 45330888 38 AAAAACAAAAACAAACAAACAAAAAAACCCCCTGAATA ...............................x::.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 2876108 NA +3528 chr4 + 190214555 48211970 48211969 48212049 80 GCACCTGTAGTCCCATCTACTCAGGAGGTTGAGTCATGAGAATCACTTGAACCCCGGAGGCGGAGGCTACAG----------CAAGCAGA chr4 + 94230402 76033206 76033205 76033295 76033206 76033205 76033295 90 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGA ....x......:...x.....::::...:....:.x..x...x...........x.:..x:xx:....::..----------........ 72M10I8M 59/80 73.8% 90/94230402 0.0% 10/80 12.5% -27821236 -66409166 +3164 chr4 + 190214555 48215026 48215025 48215113 88 ACCTGTAATCTCAGCTACGTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTAAGCCAAGATCATGCCA chr4 + 94230402 76033208 76033207 76033289 76033208 76033207 76033289 82 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..x....:.::.......x..::........x.xx.x...x.:.........:.:..x:xx:..:..:..------..x..x...... 70M6D12M 58/82 70.7% 82/94230402 0.0% 6/82 7.3% -27818182 -66412220 +3069 chr4 + 190214555 48215378 48215377 48215449 72 GCATCTATAATCCCAGCTACCTGGGAGGCTGAGGCAGGAAAATCACTTGAGCCTGGGAGGTGGAGACTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x.:..:.:........:..::........x.xx.x:..x.......:..::.:..x.xx:.:...:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -27817828 -66412574 +3106 chr4 + 190214555 48232160 48232159 48232231 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCGGGGAGGCAGAAGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x.xx.x...x.::.......x:.:..x:xx::....:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -27801046 -66429356 +3496 chr4 + 190214555 48237190 48237189 48237262 73 TGCACCTATAGTCCCAGCTACTTGGGAGGCTAAGGCATGCAAATAGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:....:...........::.....:..x.x..::..xx:.........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -27796015 -66434387 +3310 chr4 + 190214555 48237315 48237314 48237395 81 GTCTCAAAAAAAAAAAAAGAGAGAGAGAGAAAATAATAATTTTTAAA----AAAATAGCTGGTGACTAGAACAGCCTATCCTAGT chr4 + 94230402 66310861 66310860 66310943 66310861 66310860 66310943 83 GTTTAAAGAAAAAAAAAAGAGAGAGAGAGAGAAGAAATATTTTTAAAATTCAGAAATTCTGGTTACT--GAGAGACCATCCTTGT ..:.x..:......................:..x..xx.........----.:..xxx.....x...--:.x..x.:.....x.. 47M4I16M2D16M 62/79 78.5% 83/94230402 0.0% 6/79 7.6% -18073546 -76156856 +3767 chr4 + 190214555 48263583 48263582 48263645 63 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGACGCAGGAGAATCACTTGAACCCAGGAGCT chr4 + 94230402 76033204 76033203 76033266 76033204 76033203 76033266 63 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......x....:.:.........:.::.......xx.xx.x...x.............:.... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% -27769621 -66460781 +3101 chr4 + 190214555 48265383 48265382 48265423 41 ATATATGTGTGTGTATATGTATATATATACACACACATATA chr4 + 94230402 37579520 37579519 37579560 37579520 37579519 37579560 41 ATATATATGTGTGTGTATGTATATAAATGCACACGCATATA ......:.......:..........x..:.....:...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 10685863 NA +3170 chr4 + 190214555 48265393 48265392 48265464 72 GTGTATATGTATATATATACACACACATATATATACACACACACATATATACGTATATATATACATATATAC chr4 + 94230402 54963190 54963189 54963261 54963190 54963189 54963261 72 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ..x.:...:.x:...:.x.::.....x......:.........xx:.::.:..:x:...:.:....x..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -6697797 -87532605 +3280 chr4 + 190214555 48265407 48265406 48265462 56 ATATACACACACATATATATACACACACACATATATACGTATATATATACATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:.........:.:..:x...:.....x................:..:x..x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -26260667 -67969735 +3485 chr4 + 190214555 48265416 48265415 48265503 88 CACATATATATACACACACACATATATACGTATATATATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x:.x:x.x.....:....x.::..::.x.:....::.....x.x.:..:....:x.......:......::..:.::.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 25665235 NA +3411 chr4 + 190214555 48265418 48265417 48265508 91 CATATATATACACACACACATATATACGTATATATATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-----TACATGAATAAATATATATAT ...:.:.:..::.........x...:x::....:..:...:...:.........x:x.x.x:x..-----..:...x:.:x.......... 65M5D21M 60/86 69.8% 86/94230402 0.0% 5/86 5.8% 25017697 NA +3178 chr4 + 190214555 48265428 48265427 48265509 82 CACACACACATATATACGTATATATATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATATATATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ..::..:..x.x.x...:...::.x.x.:.:..:..::..:...x.xx...x.....:..:.......::....x.:.x... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -28111429 -66118973 +3053 chr4 + 190214555 48300323 48300322 48300375 53 TACTTAACCTCAATTTTATTTTTGATTTAATTTTAATTTCTTTTTTTTTTTTT chr4 + 94230402 77614478 77614477 77614530 77614478 77614477 77614530 53 TACTCAAAGCAAGTTTTATTTTTCATTTGATTTTGATTTTGTTTTTTTTTTTT ....:..xx:x.:..........x....:.....:....:x............ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -29314155 -64916247 +3280 chr4 + 190214555 48318537 48318536 48318629 93 CTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAACAAAACAAAAAACCAAGATCTGGGTACTAAGTGTGCTTATCGCTACAA chr4 + 94230402 53113927 53113926 53114019 53113927 53113926 53114019 93 CCAGGCTGTATATTGATCTTCTTTCTAGAAAGAAAAAAAAAAAAACACAACATATCTTTAAAATAAGAATACTAAATATGCCTATTCCTACAA .::...x::.x.x:..xx:..:x...x:...:...............x....x.xxx::..:..xx.::......:.:...:...:x...... 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% -4795390 -89435012 +3088 chr4 + 190214555 48371993 48371992 48372045 53 CGCACACACACACACACACATATACATATATACACATATATATACATATACAT chr4 + 94230402 74526077 74526076 74526129 74526077 74526076 74526129 53 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT .:............::x.....:...x.....:..:.......::..x..x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -26154084 -68076318 +3184 chr4 + 190214555 48385984 48385983 48386047 64 TATAGTCCCAGCTACTTAAGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAAGCTG chr4 + 94230402 76033211 76033210 76033274 76033211 76033210 76033274 64 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .:....:..........:.:........x:xx.x.:.x::.....:.....:..:..x::.... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -27647227 -66583175 +3008 chr4 + 190214555 48386058 48386057 48386116 59 TGATCATGCTGCTGCACTCCAGTCTATTGAAAGAAAAAAAAAAAAAAAAAAAGCTACGA chr4 + 94230402 82269855 82269854 82269913 82269855 82269854 82269913 59 TGAGTATCCTGTTGTAAGTCAGCTTATTAAAAGAAAAAAAGAAAAAAAAAATCCTAAGA ...x:..x...:..:.xx:...::....:...........:..........xx...x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -33883797 -60346605 +3052 chr4 + 190214555 48390056 48390055 48390105 50 ATGAATTTTGTTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTTTCCTGAGA chr4 + 94230402 50298296 50298295 50298345 50298296 50298295 50298345 50 ACAAATGTTGGTTTCTCTGTTTCTTTTTTTTTCTTTTTTTTTCCCTGTGA .::...x...x.....:.x.........:...:.........:....x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -1908240 -92322162 +3211 chr4 + 190214555 48413098 48413097 48413151 54 TGCATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAGTCGCTTGAACC chr4 + 94230402 76033205 76033204 76033258 76033205 76033204 76033258 54 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC ....:x......:...........::........x.x:.x..:x.:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -27620107 -66610295 +3222 chr4 + 190214555 48418078 48418077 48418177 100 TTCTTCTTCTTCTTCCTCTTCCTCCTCTTCCTCCCTCCTTCCTCCTTCTTTCTCCTTCCTCCTTCTTTCTCCTTCCTTCTCCCTCTTCTTCTTTTTTTTT chr4 + 94230402 37521429 37521428 37521525 37521429 37521428 37521525 97 TTTATCTGATTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCT---TGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTT ..:x...xx.....:..:x....::.x.x.:....::..:......x:x.x:.x:..:..---.xx..::.:..::...:...:.::...:......... 60M3D37M 62/97 63.9% 97/94230402 0.0% 3/97 3.1% 10896649 NA +3095 chr4 + 190214555 48418088 48418087 48418169 82 TCTTCCTCTTCCTCCTCTTCCTCCCTCCTTCCTCCTTCTTTCTCCTTCCTCCTTCTTTCTCCTTCCTTCTCCCTCTTCTTCT chr4 + 94230402 61462492 61462491 61462573 61462492 61462491 61462573 82 TTTTTTTATTCTTGGTCTTCTTCCCTCCCTTCCCAGGTTTTTTCCCTCTTCAATCCCTTTCCAGCTCTCTCCCACTACTTCT .:..::.x...:.xx.....:.......:.:.:.xxx:...:...:..:..xx..::.:...xx.::......x..x..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -13044404 -81185998 +3126 chr4 + 190214555 48420983 48420982 48421028 46 ATTTTGTTGTTGTTTTTTGTTTTGTTTTTGTTTTTGTTTTGTTTTT chr4 + 94230402 57713699 57713698 57713744 57713699 57713698 57713744 46 ATTTTCCTGTCACTGTTTGTTTTGTTGTTGTTTTTGTTTTGTTTTT .....x:...:::.x...........x................... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -9292716 -84937686 +3077 chr4 + 190214555 48437443 48437442 48437486 44 CTTATTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTAAATCCATT chr4 + 94230402 79391310 79391309 79391353 79391310 79391309 79391353 44 CTTACTCTTCTGTTGTTTTTTGTTTGTTTGTTTTTAAATACATT ....:.:..:....x.x......................x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -30953867 -63276535 +4162 chr4 + 190214555 48455742 48455741 48455841 100 AAGAGAAAAAAGAGAGAAA-GAAAAAAAGAGA---AGAAAAGAAAGGGAAGAGAGAAAGAGAAAGAAAGAAGAAAGAAGAAATAGAAAAGGAAGAAAGAGAAAG chr4 + 94230402 15855375 15855374 15855478 15855375 15855374 15855478 104 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAG .....x...:........:-.:.x..:.:...---:..x...xx.:..:.:...xxx.....:...:..........:....x:..x.:.:.....x..:.... 19M1I12M3I69M 73/100 73.0% 104/94230402 0.0% 4/100 4.0% 32600367 NA +3998 chr4 + 190214555 48455751 48455750 48455894 144 AAGAGAGAAAGAAAAAAAGAGAAGAAAAGAAAGGGAAGAGAGAAAGAGAAAGAAAGAAGAAAGAAGAAATAGAAAAGGAAGAAAGAGAAAGAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAAAGAAAGGAAAAGAAAGAATCAA chr4 + 94230402 49044652 49044651 49044780 49044652 49044651 49044780 129 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGA-----CAAGTAGTGAGAAGCACTA----------AGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAA ..:...xx..::.:......:x.::.:.xx.:...x:.xx.......-----x...x..x:.....x.x..----------.:x.......:::.:..xx..........::..::x......x:..:.............x.. 47M5D19M10D63M 88/129 68.2% 129/94230402 0.0% 15/129 11.6% -588901 -93641501 +3156 chr4 + 190214555 48455826 48455825 48455910 85 AGGAAGAAAGAGAAAGAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAAAGAAAGGAAAAGA--AAGAATCAAATCCCTAAGAAGTTAT chr4 + 94230402 61014667 61014666 61014752 61014667 61014666 61014752 86 AGGAAAAAAGAGGAAAGAAAAAGAAAAAGGAAAAAGGCTTCAGAAAAAAAAAGCAACTGATGAAGAA-CACATGTTCAGGGGGTTAT .....:......:..::.:..........:..:..:.xxxx.......:....x..xx..--.....-..x..x:::.:.::..... 60M2I5M1D19M 60/84 71.4% 86/94230402 0.0% 3/84 3.6% -12558841 -81671561 +3726 chr4 + 190214555 48457406 48457405 48457488 83 CACAGTGGCTCATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:x..:..--...:.:...........::........x:xx.x...x::...........:..x.xx:..:..:.. 15M2D66M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -27575791 -66654611 +3138 chr4 + 190214555 48459493 48459492 48459564 72 GCACCTATAATCTGAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAAACCAGAAGATGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:..:.::x.........::........x.xx.x...x::......x.......x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -27573713 -66656689 +3269 chr4 + 190214555 48472198 48472197 48472237 40 CCTTCCTTCTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTT chr4 + 94230402 38525370 38525369 38525409 38525370 38525369 38525409 40 CCCTCCCTCTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTT ..:...:......:........:................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 9946828 NA +3307 chr4 + 190214555 48487761 48487760 48487840 80 TTTTGAAGGCTATTTTTTTTTGAAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGAAATGGAGTGTTGCTCT chr4 + 94230402 67745286 67745285 67745365 67745286 67745285 67745365 80 TTTCAAAGGCGGGATTCATTTGTAGGGTTTTTTTGTTTGTGTTTGTTTTTTTTTTTTTAACTTAAACAGAGTATAGCTTT ...::.....x:xx..:x....x..:.:......x...x.x...x.............x:x.x...::....:.x...:. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% -19257525 -74972877 +3014 chr4 + 190214555 48487771 48487770 48487820 50 TATTTTTTTTTGAAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 43275284 43275283 43275333 43275284 43275283 43275333 50 TATCTGTGTTTGAACAGATTCTTCTTTTTTTTTCTTTTTTTCTTTTTCTG ...:.x.x......x..x..:..:.........:.......:.....:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 5212487 NA +3183 chr4 + 190214555 48522151 48522150 48522223 73 TGCACCTGTAGTCCTAGCTGCTTGAGAAGCTGAGGCAAGAGGATCACTTGAGACCTGGAGTTTAAGAATACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.:....:.....:.:......x.xx.x.:.x.......:x..x.:..:..x:.:x.::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -27511054 -66719348 +3073 chr4 + 190214555 48535595 48535594 48535631 37 ACACACACACACACACACACATATATATATAGTAAAT chr4 + 94230402 67195547 67195546 67195583 67195547 67195546 67195583 37 ATATACACACACACACACACATATATATATAATAAAT .:.:...........................:..... 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -18659952 -75570450 +3034 chr4 + 190214555 48583882 48583881 48583934 53 GCAACAGAGCAAGACATCATCTCAAAAAAAAAAGAAAAAAAAAAATGTGTTGA chr4 + 94230402 88382708 88382707 88382760 88382708 88382707 88382760 53 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGA ....x:..........x.x.........::.:.:...........x.::.x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -39798826 -54431576 +3595 chr4 + 190214555 48590348 48590347 48590413 66 GTGATGCACGCCTGTGGTCCCAGCGACTTGGGAGGCTGAGGCATGAAAATCACTTGAACTCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:......--...:..:.....x.....::........x.x..x:..x.........:...:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% -27442853 -66787549 +3810 chr4 + 190214555 48609491 48609490 48609564 74 GTGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGTTGGGAGGATCACTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.......::::........::xx.x.:.x.......:.....:..x.:x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -27423713 -66806689 +3438 chr4 + 190214555 48614681 48614680 48614844 164 CATTGCACACTAGCCTGGGCAACAGAGTGAG----ACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAAACTATAATAACAAATACTCAGGTTTATTCCAAGGCTATTTCCACTACCACTGCCAAAAGTTTAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 29396483 29396482 29396646 29396483 29396482 29396646 164 CATTATATACATGCATGAGTGAACGAATCAATCAAACATTATTTAAAAGATAAAAGTGGAAAAAAATGATCATCTCTCTCATCAAGAAAAAAAGCAACTCACA----TATATCAATCATCACATCTAAAAGTTTGGTGTTTTTTTTTTTTTTTTTTTCTCATTTGTTT ....::.:..xx..x..:.::.xx..:.x.:----..x::..:.x...:.x....:x::.......x..xx.x..x.xx:.x...:x.xxx.:.:xxx.:x..----...x..x.::.:...xx.:........::..:..................:.:x...x... 31M4I68M4D61M 99/160 61.9% 164/94230402 0.0% 8/160 5.0% 19218198 NA +3476 chr4 + 190214555 48632027 48632026 48632129 103 TGGGAGACACAGCAAGACCCTGTCTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548371 85548370 85548473 85548371 85548370 85548473 103 TAAGAGACAAACCAGACCATTGTCACATCTGGACAATCAAAAGCTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .::......x.x..::x.x:....x.x:.x::.x..xx....:xxxxxx.............:.:x.....:...:.:.:.::...:..........x..... 103M 67/103 65.0% 103/94230402 0.0% 0/103 0.0% -36916344 -57314058 +3068 chr4 + 190214555 48632065 48632064 48632120 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 47137065 NA +3121 chr4 + 190214555 48632067 48632066 48632120 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -41398009 -52832393 +3282 chr4 + 190214555 48632067 48632066 48632122 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 47137067 NA +3014 chr4 + 190214555 48632069 48632068 48632127 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -2840421 -91389981 +3282 chr4 + 190214555 48632071 48632070 48632126 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 47137071 NA +3341 chr4 + 190214555 48651255 48651254 48651328 74 TGTGTAGTGGTAGAAACAGGATCTCAGGATCTCACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 60813624 60813623 60813697 60813624 60813623 60813697 74 TGTGTAGGGGTGTAGTCAGGTCTTCTGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGT .......x...:x.:x....x::..x.x:.....x.....x:x.........:.........x..x.x:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -12162369 -82068033 +3002 chr4 + 190214555 48654284 48654283 48654339 56 CCTTAATAGCTGATCAAAAAAAAAAAAAAAACAAAAACAAAAACAAAAAAAACTGG chr4 + 94230402 50174304 50174303 50174359 50174304 50174303 50174359 56 CCTTAAAACCAAAGCAAAATAAAAAAAGATATCAAAACAACAACAAAAAAAGCTGG ......x.x.x:.x.....x.......:.x.:x.......x..........:.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -1520020 -92710382 +3513 chr4 + 190214555 48659211 48659210 48659293 83 CATAGTGGTGTGCGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGACACAAGAATTACTGGAACCCCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.......::..--......:.........:.::........x.x::x...x:...x......x.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -27373986 -66856416 +3595 chr4 + 190214555 48659355 48659354 48659456 102 AAACAAAAAAAAAGAGAGAGAAGAAGAAGGAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGG chr4 + 94230402 10269792 10269791 10269893 10269792 10269791 10269893 102 AAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .....:.....x..x..:.........:::x:...:.:x.:....xx...:.:.:x:x....:.x..:.::.....x.xx:.......::.:x::.x..:.. 102M 64/102 62.7% 102/94230402 0.0% 0/102 0.0% 38389563 NA +3534 chr4 + 190214555 48659358 48659357 48659464 107 CAAAAAAAAAGAGAGAGAAGAAGAAGGAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGG chr4 + 94230402 15855374 15855373 15855480 15855374 15855373 15855480 107 CAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ...:.:x.............x:..x::::...:xxx:..x:::xx.:.:...:..xxx:....::....::..:........:....x::.:....:x..:..::.. 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 32803984 NA +3225 chr4 + 190214555 48659362 48659361 48659499 138 AAAAAAGAGAGAGAAGAAGAAGGAGAAG-GAGAAGAAGGAGAAGGAGAAGGAGAAG-----GAGAA-------GGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAG chr4 + 94230402 35548688 35548687 35548838 35548688 35548687 35548838 151 AGAGAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCTCCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAG .:.:..:.......x..xx.x.:x....-.x.x..x:x......x::::.x:.x..-----.....-------.::.x...........x.....x.:.........:x....x:..:..::xxxx...:.x.x:x:.....:x...x... 28M1I27M5I5M7I78M 90/138 65.2% 151/94230402 0.0% 13/138 9.4% 13110674 NA +3754 chr4 + 190214555 48659369 48659368 48659554 186 AGAGAGAAGAAGAAGGAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAG---------GAGAAGAGGGAGAAGGAGAAGAGG chr4 + 94230402 91773935 91773934 91774129 91773935 91773934 91774129 195 AAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG .:.x:......x..x..::.x.:....:x.xx..::..:..x.x:x....:x..x..:.:x:.:....::x::xxx:x::.x.:.x.........:.x:::x...:.x.:.x.:..::x..:..::..:xx.:.......:.x:x:..:...:.::.:...:---------:...:x.:.:.:..x...x..... 162M9I24M 103/186 55.4% 195/94230402 0.0% 9/186 4.8% -43114566 -51115836 +3685 chr4 + 190214555 48659388 48659387 48659554 167 AGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGG-------AGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAG---------------AGGAAGAGGGAGAAGAGGA-----AGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAG---------GAGAAGAGGGAGAAGGAGAAGAGG chr4 + 94230402 91771688 91771687 91771890 91771688 91771687 91771890 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG .....:x:..:x:....:.x..x..::.x.:.....-------....:.x.x.x.....x..x.:..:x.:...:...x..---------------.....::::x...x.....-----.:..::x..:..::...xx.:.......:.x:x:..:...:.::.:...:---------:...:x.:.:.:..x...x..... 36M7I38M15I19M5I50M9I24M 107/167 64.1% 203/94230402 0.0% 36/167 21.6% -43112300 -51118102 +3581 chr4 + 190214555 48659407 48659406 48659557 151 GAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGG---------AAGAGGGAGAAGAGGAAGAGGGAG---AAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGA------GGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAG chr4 + 94230402 890617 890616 890785 890617 890616 890785 169 GAATGGGAAGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG ...x.:....xxx.:x:.:::..x.xx.:...:.:..xx.:..---------:......:.x..............---.::.......:.x:..x.:....:..:...x:x.:.:...------:..x..x.::.....:x.::x:.:.....xx..:xx:x...... 43M9I24M3I40M6I44M 95/151 62.9% 169/94230402 0.0% 18/151 11.9% 47768790 NA +4081 chr4 + 190214555 48659425 48659424 48659572 148 GAAGAGGAAG---AGGAAGAGGAAGAGGAAGAGGGAGAAGAGG---------AAGAGGGAGAAGAGGAAGAGGGAG---AAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGA------AGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAG chr4 + 94230402 890617 890616 890785 890617 890616 890785 169 GAATGGGAAGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG ...x:.....---..x..::...x.xx.::.....:.xx.:..---------:......:.x..............---.::.:.....:.x:..x.:....:..:...x:x.......------...x..x.::.....:x.::x:.:.....xx..:xx:x...... 10M3I30M9I24M3I40M6I44M 100/148 67.6% 169/94230402 0.0% 21/148 14.2% 47768808 NA +3841 chr4 + 190214555 48659431 48659430 48659602 172 GAAGAGGAAG---AGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAG chr4 + 94230402 890617 890616 890785 890617 890616 890785 169 GAATGGGAAGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAG-GGTAGAAG-----GAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG ...x:.....---..x..::...x.xx..:..:.:..xx.:..x.:xxx:x::......:.x...:..........-:.x.....-----.....:.x:..x......:..:...x:x::.:...::xx::...x..x.::.....:x.::x:.:.....xx..:xx:x...... 10M3I63M1D8M5D85M 102/166 61.4% 169/94230402 0.0% 9/166 5.4% 47768814 NA +3557 chr4 + 190214555 48659438 48659437 48659598 161 AAGAGGAAGAGGA-AGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGA-AGAGGGAGAAGGAGAAGAGGGAGAAG--------GAGAAGAGGGAGAAGGAGAAGAG chr4 + 94230402 14577301 14577300 14577464 14577301 14577300 14577464 164 AAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGA------AAGAGTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTT-GAAGAAGACAGCTAAGGAAGGGTAAGGGTGTGAAGTGCTACAAAAGCAGCTGGAGAACTACAAAAG ..:.......x..-..:.:x.:...........:..:.x.:....xx.:------....:x...x..:...::.:.:.x.....::.x....x.::xx....xx-....:...-..xx:::.....:x...:.x.x....--------:..x..xx......xx.x..:.. 13M1I35M6D49M1D8M1I26M8I23M 103/154 66.9% 164/94230402 0.0% 17/154 11.0% 34082137 NA +3856 chr4 + 190214555 48659443 48659442 48659617 175 GAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAG chr4 + 94230402 890617 890616 890785 890617 890616 890785 169 GAATGGGAAGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAG----GGTAGAAG--GAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG ...x:.....xxx::x..::...x.xx..:..:.:..xx.:..x.:xxx:x::......:.x...:..........----..x.....--.....:.x:..x......:..:...x:x::.:...::xx::...x..x.::.....:x.::x:.:.....xx..:xx:x...... 76M4D8M2D85M 101/169 59.8% 169/94230402 0.0% 6/169 3.6% 47768826 NA +3856 chr4 + 190214555 48659766 48659765 48659956 191 AGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAG-AAGAGGGAG--------AAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAA----GGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG chr4 + 94230402 91773927 91773926 91774129 91773927 91773926 91774129 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTA-AAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG ..:...x:..:x..:....x:.x:.:::x.:.....x.xx...:..:..x.x:x..:::x..x....:-.:...:...--------:..x.:.x.......:::.x:..x:....x...x.-...:.x:.......----.:.....:.:.x:x..::.:.:..:.:...:.x:x.xxxx....:x.....:..x:..x...:. 68M1I9M8I35M1D14M4I64M 115/190 60.5% 203/94230402 0.0% 14/190 7.4% -43114161 -51116241 +3599 chr4 + 190214555 48659796 48659795 48659981 186 AGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGA---AGAAGGAGAAGGAGAAGGAGAAGGAGA------AGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA--------AGAAGAAGAAGAAAGGAGGAGGAG chr4 + 94230402 91771688 91771687 91771890 91771688 91771687 91771890 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG ..:...x:..:x..:....x:.x:.:::x.:.....x.xx...:..:..x:---..:.:x..x....:x......::.x::------..x.:.x....:.::::.x:..x:....x...x.:.:::x..:.:::...xx.........:.x:x..::...:..:::...:.--------.::..x.::.:...x...x..::. 51M3I27M6I84M8I24M 107/186 57.5% 203/94230402 0.0% 17/186 9.1% -43111892 -51118510 +3743 chr4 + 190214555 48659796 48659795 48659981 186 AGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGA---AGAAGGAGAAGGAGAAGGAGAAGGAGA------AGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA--------AGAAGAAGAAGAAAGGAGGAGGAG chr4 + 94230402 91773927 91773926 91774129 91773927 91773926 91774129 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTA-AAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG ..:...x:..:x..:....x:.x:.:::x.:.....x.xx...:..:..x:---..:.:x..x....:x......::.x::------..x.:.x.......:::.x:..x:....x...x.-...:.x:.......:.x-.........:.x:x..::...:..:::...:.--------.::..x.::.:...x...x..::. 51M3I27M6I34M1D17M1I32M8I24M 114/185 61.6% 203/94230402 0.0% 19/185 10.3% -43114131 -51116271 +3399 chr4 + 190214555 48659814 48659813 48659971 158 AGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGAAGAAGGAGAAGGAGAAGG---AGAAGGAGAAGGAGAAGGAGAAGGAGA------AGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA---AGAAGAAGAAGAAGAAA chr4 + 94230402 91773927 91773926 91774096 91773927 91773926 91774096 170 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAAA .....:x:.::x:....:.x..x:::..x::....:x.xx..::..:..x.---..:.:x..x....:x......::.x::------..x.:.x.......:::.x:..x:....x...x.:.::.x..:..::..:xx.........:.---..::...:..:::.... 51M3I27M6I63M3I17M 94/158 59.5% 170/94230402 0.0% 12/158 7.6% -43114113 -51116289 +3277 chr4 + 190214555 48659814 48659813 48659971 158 AGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGAAGAAGGAGAAGGAGAAGG---AGAAGGAGAAGGAGAAGGAGAAGGAGA------AGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA---AGAAGAAGAAGAAGAAA chr4 + 94230402 91771688 91771687 91771857 91771688 91771687 91771857 170 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAA .....:x:.::x:....:.x..x:::..x::....:x.xx..::..:..x.---..:.:x..x....:x......::.x::------..x.:.x....:.::::.x:..x:....x...x.:.::.x..:..::...xx.........:.---..::...:..:::.... 51M3I27M6I63M3I17M 93/158 58.9% 170/94230402 0.0% 12/158 7.6% -43111874 -51118528 +3164 chr4 + 190214555 48662757 48662756 48662813 57 CTCCTGAAGAAAAAAAAAAAAAAAAAAAGCAGGAAATTATACAAGGCAGAAGTTAGA chr4 + 94230402 64343823 64343822 64343879 64343823 64343822 64343879 57 CTGTTGAAGGAAAAAAAAAAAAAAAGAGGCAGAAAAAAAAACCAGGCAGAATTCAAA ..x:.....:...............:.:....:...xx.x..x........x.:.:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -15681066 -78549336 +3779 chr4 + 190214555 48700662 48700661 48700744 83 CATGGTGGTGTGTGTTTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:::..--.....:...........::........x:xx.x.:.x.:.....:.....:..x.:x:.....:.. 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -27332535 -66897867 +3035 chr4 + 190214555 48702741 48702740 48702804 64 ACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAAGAAAGAAAAGAAAAAATACATA chr4 + 94230402 18047933 18047932 18047996 18047933 18047932 18047996 64 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATA .....:...xx..::x...:............x...:....xx:....x:.x......x:.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 30654808 NA +3572 chr4 + 190214555 48720019 48720018 48720130 112 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTAGGAG---------GTGGAGATTGGAGTGAGCCAAGATTGTGCC-----ACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......x....:.:...........::........x.xx.x...xx:........:..:..---------..:..:xx..:x.:x.:x..::xx......-----x....x.-.....x....... 61M9I30M5I7M1D13M 80/111 72.1% 125/94230402 0.0% 15/111 13.5% -27313185 -66917217 +3596 chr4 + 190214555 48720351 48720350 48720439 89 ATCAGGCATGGTGGCATGCACCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGAACTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033191 76033190 76033277 76033191 76033190 76033277 87 ATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x:..::....--.....x....:.:.........:::.........x.xx.x...x::.........:.:..x.xx:..:..:.. 14M2D73M 61/87 70.1% 87/94230402 0.0% 2/87 2.3% -27312840 -66917562 +3041 chr4 + 190214555 48746560 48746559 48746598 39 AAAAAGAAAACAAACAAACAAAAAACAGGTCTGCAAATT chr4 + 94230402 66086942 66086941 66086980 66086942 66086941 66086980 39 AAAAAAAAAACAAACAAACAAGAAACTGGTTTGCAAATT .....:...............:....x...:........ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -17340382 -76890020 +3531 chr4 + 190214555 48748115 48748114 48748188 74 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGGATCATTTGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........::........x.xx.x.:.x..:.......::.:..x:xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -27285089 -66945313 +3060 chr4 + 190214555 48766981 48766980 48767044 64 ATATCTATATATTATATATTATATATTTTATATATTATATATAAAATATGTATTGTATTATATA chr4 + 94230402 26320258 26320257 26320321 26320258 26320257 26320321 64 ACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATA .:..x......:..:...........x:......:x......xx.x.......:xx..x:.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 22446723 NA +3051 chr4 + 190214555 48776057 48776056 48776106 50 AAAAGAAAAAAAGGAAAAAAAAAACCTGAAAGAATAAACAACCACTAACA chr4 + 94230402 82269883 82269882 82269932 82269883 82269882 82269932 50 AAAAGAAAAAAAGAAAAAAAAAATCCTAAGACATTAATGAACTACTAACA .............:.........x...:.:.x.x...xx...:....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -33493826 -60736576 +3272 chr4 + 190214555 48797507 48797506 48797591 85 AGGAAGGAAGGAAGGAATGAATTAAGGAAAAGACAGAAGAGAAAGGAAGAAGGAAAGAAAGAAAGAAAAGGAAGGAAAAGAAAGA chr4 + 94230402 985428 985427 985512 985428 985427 985512 85 AGGGAGGAAGTGGAACAACAGATAAGGGAAAGGCTGGAGAGCAGGGGATGGGGGAAGGAAGAGACAAAGGGAAGAACGGGAAAAA ...:......x::::x.xx.:x.....:....:.x.:....x.:..:.x::..:...:....:.x...:.....:.x::....:. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 47812079 NA +3232 chr4 + 190214555 48798863 48798862 48798921 59 GAAAGAAAGAAA---GAGAGGAGAGAGAGAGGGGAGAGAGAAAAAGGGAGAAAGAAAAAAGA chr4 + 94230402 39594994 39594993 39595055 39594994 39594993 39595055 62 GGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA .:.::.......---:..:......:.:::....x....:.....::..:............ 12M3I47M 45/59 76.3% 62/94230402 0.0% 3/59 5.1% 9203869 NA +3179 chr4 + 190214555 48799892 48799891 48799948 57 CAAAAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAA chr4 + 94230402 57620658 57620657 57620714 57620658 57620657 57620714 57 CAAAAAAAAAAAAAGCAATACAAAAAAACCCACACACACACAAAAAAACCCCACAGA ..............:x..x.x........x............x.x....xx..x.:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -8820766 -85409636 +3321 chr4 + 190214555 48799892 48799891 48799951 60 CAAAAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAA chr4 + 94230402 39267929 39267928 39267988 39267929 39267928 39267988 60 CATGAAAAGAAAAATGAAAAAATAAAAACACACACCCCCCCAAAAAAACAACAACAACAA ..x:....:.....x:......x............x.x.x..x.x.........x..... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 9531963 NA +3110 chr4 + 190214555 48799893 48799892 48799953 61 AAAAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAACA chr4 + 94230402 37755104 37755103 37755163 37755104 37755103 37755163 60 AGAAGGCAAAAGGAAAACAAAACAAAACACACACACACACACA-AAATGAAAAAAAAAGCA .:..::x....::....x....x....................-...::.x.....x.:.. 43M1D17M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% 11044789 NA +3187 chr4 + 190214555 48799895 48799894 48799947 53 AAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAA chr4 + 94230402 45036940 45036939 45036992 45036940 45036939 45036992 53 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAA ...........x.....xx........:.x.x.:.........x....x.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 3762955 NA +3018 chr4 + 190214555 48799903 48799902 48799951 49 AAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAA chr4 + 94230402 73362648 73362647 73362696 73362648 73362647 73362696 49 AATAGAGAAAGAATAAACACACACACACACACACAAAAAAAAAAGCCAA ..x.:.:...:..x.......................x..x...:x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -24562745 -69667657 +3186 chr4 + 190214555 48799903 48799902 48799952 50 AAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAAC chr4 + 94230402 79014289 79014288 79014333 79014289 79014288 79014333 45 AATGAAAAAAAGAAAAACACACACACACACACACAA-----AAAAACAAC ..x:.......:........................-----......... 36M5D9M 42/45 93.3% 45/94230402 0.0% 5/45 11.1% -30214386 -64016016 +3281 chr4 + 190214555 48802597 48802596 48802663 67 TGTAATCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::..........xx.x...x::........::.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -27230614 -66999788 +3525 chr4 + 190214555 48812147 48812146 48812225 79 GTGATGCATGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--....x.:...........::........x.xx.x...xx:...........:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -27221054 -67009348 +3351 chr4 + 190214555 48812301 48812300 48812376 76 AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAACTAAATTTGGCATTTATGATATGGTATTTAAAGCCTTGACACCA chr4 + 94230402 52382864 52382863 52382939 52382864 52382863 52382939 76 AAAAAAAAAAAAGAAAGAAAGGGAAGACGAAAATAGATTGGGATTGTATGGTTTAGTAAGAAAGGCTTTAAGACCA ............:.......:.:..:.x:...x..:...x..xx.x....:.x.:...xxx..:..:..:.x.... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -3570563 -90659839 +3061 chr4 + 190214555 48813514 48813513 48813596 83 CGTAGTGGCATGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGATGGGAGGCTCACTTGAGCCGGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....--..::.x......:...........::........x:xx.x.:xx.......:..x:.:..x.xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -27219683 -67010719 +3174 chr4 + 190214555 48814231 48814230 48814317 87 GTGGAGGGGTTTTTTTTTTTTTTTTAATCCTTGCCTCTGCCTGAAAATGAAACTGTCCAAGAAAGAAAAGCAGAGTATGGCTATTCA chr4 + 94230402 91292968 91292967 91293054 91292968 91292967 91293054 87 GTTGGGGGATTTTTTTTTTTTTTTTAATCTTTGTCTTTCAGTCACAGCTGAAATTTCCAGGAATAAAACTCATAGGAGTGTTATACA ..x.:...:....................:...:..:.xxx.x.x.::x:..x.x....:...x:...xx..x..x.xx.:...x.. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% -42478737 -51751665 +3074 chr4 + 190214555 48815182 48815181 48815255 74 GTGCACCTGTAATCCCAGCTAGTCAGGAGACTGAGGCAGGAGAATTGCTTGAAACCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......x.::::..:.....x.xx.x...x::......x.......x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -27218022 -67012380 +3066 chr4 + 190214555 48819690 48819689 48819751 62 AGAGACGGAGGAATATTTACCAAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGGGG chr4 + 94230402 29727545 29727544 29727606 29727545 29727544 29727606 62 AGGGCTGGAAGAATACTTAGAAATTACTTAAAAGAAAGAAGCAAAAAAAAAAAAAGGGGGGG ..:.x:...:.....:...xx..x::.xx....:...:..:x...............:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 19092145 NA +3493 chr4 + 190214555 48838178 48838177 48838260 83 CATGGTGGCAGGTGCCTGTAATTCCAGCTACTCGAGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:...........:..:........x.xx.x...x.:.........:.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -27195019 -67035383 +3897 chr4 + 190214555 48846617 48846616 48846690 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -27186587 -67043815 +3727 chr4 + 190214555 48861552 48861551 48861628 77 GTCGTGTGCCTGTAGTCCTAGTTACTTAAGAGGCTGAGTTGGGAGGATCAGTTGAACCCAGTGGTTCTGGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x...::.x......:.:..:.....:.:........::xx.x.:.x..x..........x:.:.:....:..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -27171649 -67058753 +3250 chr4 + 190214555 48882570 48882569 48882629 60 AAAAAAATAAAAAAAAAATAAAAATAAAAATAAAAATAAATAAAATAAATGTATCTTTCC chr4 + 94230402 56923951 56923950 56924010 56923951 56923950 56924010 60 AAAAAGAAGAAAAAGAAATAAAGTTAAAAACAGAAGTGAATAAAGTAAGTGCAATTTTTC .....:.x:.....:.......:x......:.:..:.:......:...:..:.x:...:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -8041381 -86189021 +3216 chr4 + 190214555 48907718 48907717 48907773 56 AAAAAAAAAACAAAAAAAAAACAAAAAACAAGAAGAACAACAACAAAAAAGAATGG chr4 + 94230402 76157007 76157006 76157062 76157007 76157006 76157062 56 AAAAAAAAAACAAAAAAAAAACCATCAACCCCAAAAACTACAACAAAAAGGAACAG ......................x.xx...xxx..:...x..........:...::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -27249289 -66981113 +3415 chr4 + 190214555 48910272 48910271 48910335 64 CCCTCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCTTCTTTCCTTCCTTCCCTCCCTTCCTTCC chr4 + 94230402 25163655 25163654 25163718 25163655 25163654 25163718 64 CCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ...:.x.::..x:......::......x...x..........:..:..::...:..:..:::.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 23746617 NA +3217 chr4 + 190214555 48910275 48910274 48910336 62 TCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCTTCTTTCCTTCCTTCCCTCCCTTCCTTCCT chr4 + 94230402 86523033 86523032 86523094 86523033 86523032 86523094 62 TCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCCACTCT ......::..:..::...x.:....:...:....:.:....:..:xx..:.......x::.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -37612758 -56617644 +3051 chr4 + 190214555 48917605 48917604 48917653 49 ATATACATACAT---ACATATATATATATATATACACACACACACACAAAGA chr4 + 94230402 74671060 74671059 74671111 74671060 74671059 74671111 52 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAA .......x.x..---x::................................:. 12M3I37M 43/49 87.8% 52/94230402 0.0% 3/49 6.1% -25753455 -68476947 +3220 chr4 + 190214555 48917613 48917612 48917728 116 ACATACATATATATATATATATACACACACACACACAAAGATTTGT------------ATATCTATATATTTATA-----TAGATATATAAAGATGCCA-TCTATGTA-TCATCTTTGGTGAGGTATCTGTTAGG chr4 + 94230402 54005688 54005687 54005819 54005688 54005687 54005819 132 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTAATTCTGACAAAG---CTGTTAGG ...:.:..:...x........:.:.............:.:..:...------------.x.x:..:....x....-----...x.x....x.x:...:.-.:.:...:-.:.x:.:..:::.:.---........ 46M12I17M5I19M1I8M1I15M3D8M 82/113 72.6% 132/94230402 0.0% 22/113 19.5% -5088075 -89142327 +3044 chr4 + 190214555 48933118 48933117 48933191 74 CTCAAA-ACAACAACAACAACAACAACAACAACAACAACAACAACAACAAAACAAAAACAAAAAACAACAGTGCC chr4 + 94230402 42911769 42911768 42911843 42911769 42911768 42911843 75 CTCAAATCCAAAAAAACCACCACCACCACCACCAACAACAACAACAAAAAACAAAAAACAAACCAAAACACTACC ......-x...x..x.x..x..x..x..x..x...............x...xx.........xx.x....x.:.. 6M1I68M 57/74 77.0% 75/94230402 0.0% 1/74 1.4% 6021349 NA +3423 chr4 + 190214555 48942714 48942713 48942892 179 CCTTCTTTCCTTCTTTCCTTCCTTCCTTCTCTCTCTTTCTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTC-------CTCTCT-------CCTTCCCTCCCTCCCTTCC---------------TTCTCT----------------TTTTCTCTCTCTTTTTCTTTCTTGCTTTCTTTCTCTCTCTCTCCCTTCCTTCCTT chr4 + 94230402 14546071 14546070 14546294 14546071 14546070 14546294 224 CCCTCCTGTTTTCTTGCCCAGCTCTCATCTTTTCTTTCATCTGTCTCTTCTTTTTTTCCTTTCATCTGGTTTTTGCTTCTCTTGCTTTCATTCAGTGGTGTTCTCTCAAAAAGCCCTGCTATGTTTTCTACCAATAAAAATCAGTATTTCTGTGGTTGGAGTAATTATATTTTCTTTATGTATAGCtttttttttttttttttttttttttttttttctttctt ..:..:.x::.....x..:xx..::.x...:.:::..:x...x..........:...:.....x.::xx.:...x:..:::..x.....x...-------:.....-------..:.x.:x:x:.::..x..---------------....x.----------------......:.x.x.x.xx....:..x:...:...:.:.:.:.:.:::..:...:... 93M7I6M7I19M15I6M16I55M 113/179 63.1% 224/94230402 0.0% 45/179 25.1% 34396643 NA +3341 chr4 + 190214555 48942752 48942751 48942811 60 CTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTCCTCTC chr4 + 94230402 22955527 22955526 22955586 22955527 22955526 22955586 60 CTCCCTCTCTTCTTTATGTTCTTTCCATTTTTTTTCCCCTCCTTTCCTTACCCTCATTTC ...:...........x.x........x.:...:..:.::.:........x.::..x.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 25987225 NA +3231 chr4 + 190214555 48942789 48942788 48942860 72 TTTTCTTTCCTTTCTTTCCTCTCTCCTTCCCTCCCTCCCTTCCTTCTCTTTTTCTCTCTCTTTTTCTTTCTT chr4 + 94230402 53757784 53757783 53757855 53757784 53757783 53757855 72 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTT ..:....:.x.:.:....x:....:xxx:..:...:...::..::::......:.::..:.........:.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -4814995 -89415407 +3222 chr4 + 190214555 48942852 48942851 48942935 84 TTCTTTCTTGCTTTCTTTC-----TCTCTCTCTCCCTTCCTTCCTTCCTTCTCTTTCCCTCCCTCCCTCCCTCCTTCCTTCCTTTTTTT chr4 + 94230402 49829840 49829839 49829928 49829840 49829839 49829928 89 TTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT ..:.:.x.x....x:...:-----.:...:...:::..:....:..........::...:.........x.x.x:x.x:.::x...... 19M5I65M 57/84 67.9% 89/94230402 0.0% 5/84 6.0% -886988 -93343414 +3045 chr4 + 190214555 48942859 48942858 48942894 36 TTGCTTTCTTTCTCTCTCTCTCCCTTCCTTCCTTCC chr4 + 94230402 47133592 47133591 47133627 47133592 47133591 47133627 36 TTGCTTTTTTTCTCTCTCCCTCCCTTCCTTCCTTTC .......:..........:...............:. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 1809267 NA +3081 chr4 + 190214555 48943836 48943835 48943909 74 TATACACATAAATATATATAAATATATATAAAAATATATATAAATATACATATAAATATATATAAATATACATA chr4 + 94230402 20811747 20811746 20811820 20811747 20811746 20811820 74 TACACAGAAAAACATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTACA ..:...x.x...:...xx.....x.x...x..x...:.:.x.......:.:.:x.........:x....::.:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 28132089 NA +3105 chr4 + 190214555 48955364 48955363 48955435 72 CTTTCCTCCTTCCTCCTTCCTTCTTCCTCCTTCCCTTCCCTTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTC chr4 + 94230402 83645378 83645377 83645449 83645378 83645377 83645449 72 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTC .:.x.::...:........x..:....:....:....:....::.:x.:.:xx:.....:.::.:x::.... 72M 46/72 63.9% 72/94230402 0.0% 0/72 0.0% -34690014 -59540388 +3251 chr4 + 190214555 49085885 49085884 49085952 68 TGGCCAAAAAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAAAACAAAAAACAGCAACAA chr4 + 94230402 67558787 67558786 67558854 67558787 67558786 67558854 68 TGGCCTCAATAAAACAAAAAGCAGGAGAAAAAAAGAGCAGAAAACAAACAAACAAACAACAGCAATAA .....xx..x..........xx.::.x.....x.:.:xx:........x.......x........:.. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% -18472902 -75757500 +3164 chr4 + 190214555 49085890 49085889 49085953 64 AAAAAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAAAACAAAAAACAGCAACAAA chr4 + 94230402 63541259 63541258 63541322 63541259 63541258 63541322 64 AAAAATTAAAAAAAACAAAAACAAAAACCCATACAATTACTAAGGAACAAAAAAAAATAATAAA .....xx..x..................xx.x....xx..x..::.........x.::..:... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -14455369 -79775033 +3121 chr4 + 190214555 49085892 49085891 49085954 63 AAAAAAACAAAAA----CAAAAACAAAAACAAAAACAAAAACAAAAAAACAAAAAACAGCAACAAAA chr4 + 94230402 14362606 14362605 14362672 14362606 14362605 14362672 67 AAAAATGCAAAAAGCAACAACAACATCAACAAAAACAAAAAAAATGAAATAAAAAACTGCATCAGAA .....x:......----...x....xx..............x..x:...:.......x...x..:.. 13M4I50M 51/63 81.0% 67/94230402 0.0% 4/63 6.3% 34723286 NA +3092 chr4 + 190214555 49181736 49181735 49181809 74 TTTCATTTTTTTTCCTTTTCTTTTCTTTTTTTTTTTTTTTTTACTTTGGCCTTTTGAGACAAGAAATTATTTCT chr4 + 94230402 72581783 72581782 72581852 72581783 72581782 72581852 70 TTTCATTTTCTTTCA----CCTCTCCTTTTTTCTTCTTTTTTACTTATGCCTTTATCAACCAGATATTTTCTCT .........:....x----.:.:..:......:..:..........xx......xxx:..x...x...x.:... 15M4D55M 53/70 75.7% 70/94230402 0.0% 4/70 5.7% -23400047 -70830355 +3016 chr4 + 190214555 49183070 49183069 49183118 49 TTTTGCATTGTCAATTTCCTGCTTTTGTTCTGTTGTTTTTGATTCACAT chr4 + 94230402 81030693 81030692 81030741 81030693 81030692 81030741 49 TTTTTCATCTTCATTTTCCTACTTTTCTGTTGTTGCTTTTGATTCACAT ....x...:x...x......:.....x.x:.....:............. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -31847623 -62382779 +3056 chr4 + 190214555 49185786 49185785 49185868 83 CACTCCTTTAGGAAACCCTGATCTTCTGGTCACACCAAGGTTTAATTAACTGGTTTGATTGTTTTTCTGTTTTGTTTTTTTTT chr4 + 94230402 12192803 12192802 12192885 12192803 12192802 12192885 83 CAATACCTTAGGGATTATTAACCCTCTAGTTATGCCAGTGATTGTTTTACGTGGTTTAATGTTTTTTTGTTTTTTTTTTTTTT ..x.x.:.....:.x:x:.:.:.:...:..:.::...:x.x..:x..x..xx.x..x.x.......:......x......... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 36992983 NA +3336 chr4 + 190214555 49239746 49239745 49239819 74 GCGCACCTGTAGTCCCAGCTACTTGGGATACTAAGGCAGGAGAATTGCTTGAAGCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...........::.x:..:..x.xx.x...x::......x....:..x.xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -26793458 -67436944 +3062 chr4 + 190214555 49254482 49254481 49254531 50 AGATAGGAAATGTCCCTTTAAATTTTCTTTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 61853324 61853323 61853373 61853324 61853323 61853373 50 AGATTGGAAATCTCCTTCAAAATATGCTTTTTCTTTTTCTTTTTTCTTTT ....x......x...:.:x....x.x............:......:.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -12598842 -81631560 +3327 chr4 + 190214555 49264007 49264006 49264080 74 GTGCACCTGTAGTCCCAGATGCTTGGAAGGCTGAGGTGGGAGAATTGCTTGAGCACAGGTGGTTGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:....x.:....:.........x:xx.x...x::.....:.x...:x.x..x:.:...:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -26769197 -67461205 +3481 chr4 + 190214555 49273688 49273687 49273795 108 CTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAGTCATAGA---TGACACAAACA-AATGGAAATGCATCCC chr4 + 94230402 10103103 10103102 10103208 10103103 10103102 10103208 106 CTTCTGAACTTAAAAAAAAAAAAAAAAAAGACAAAACCAGCCAAGCAAAACCAAGCAACAACAAA------AACCCACAGAACTAGAAACAAACAGAATGGATGTGTATTCC ........xxx..................:.x....xx.:x...:x....xx..:x.....x...------..x:..:...---x..x.......-......x:..:..:.. 65M6D10M3I11M1I16M 77/102 75.5% 106/94230402 0.0% 10/102 9.8% 39170585 NA +3019 chr4 + 190214555 49273694 49273693 49273753 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAG chr4 + 94230402 69582239 69582238 69582298 69582239 69582238 69582298 60 AAAAAAAGAAAGAAAAAAAATGACAAAAATGACAACGAAAAGAGGAGAGAACCATGAAAG .......:...:........x:.x.....x:.x...:....:.::.:.:..x..x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -20308545 -73921857 +3009 chr4 + 190214555 49273697 49273696 49273761 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAG chr4 + 94230402 17617505 17617504 17617569 17617505 17617504 17617569 65 AGAAATGAAAGAGTAAAGAAAACCAACAACAACAACAAAAAAAAAAAAACAACACATGAAAAAAG .:...x:...:.:x...:....xx..x..x.....x................x.x.x:...:... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 31656192 NA +3334 chr4 + 190214555 49273702 49273701 49273766 65 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAGTCATA chr4 + 94230402 72824140 72824139 72824204 72824140 72824139 72824204 65 AAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAAATAATCATA ....:..:.......:.....:....:...:....x.x.:x:..:.xx........:x.:..... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -23550438 -70679964 +3017 chr4 + 190214555 49518149 49518148 49518187 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 24725523 NA +3475 chr4 + 190214555 49608860 49608859 49608942 83 CATAGTGGCAGACACCTGTAGTCCCAGCTACTTGGGATGCTGAGGCAGGAGAATTGCTTGAACTTGGAAGTTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....::--...x......:...........::.x......x.xx.x...x::.......:::....:.xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -26424337 -67806065 +3067 chr4 + 190214555 49609003 49609002 49609100 98 AAAAAGAAAGAAAGGAAAGAAAGAGAGAGAAAGAAAAGAAAAGAAAAGAATAGAAAAGAAAGAGAAAACAAAAGAAATTTTTAAAAAGA--ATGACATTT chr4 + 94230402 89501678 89501677 89501777 89501678 89501677 89501777 100 AAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAATTTTCCAGCAGAAGATGAGATTT ....x....:x..::.::........:...:.:.x....:.:.:x.:..:x:..xx:...x:.::x:.x....x.......:x.:x...--....x.... 89M2I9M 63/98 64.3% 100/94230402 0.0% 2/98 2.0% -39892675 -54337727 +3469 chr4 + 190214555 49615076 49615075 49615179 104 ACTTCTTGTCTCAAAAGGCCAAAGTGAAAAAAAAAAAAAGAAAAGAAAAGGAAAAAAAAATGAAAAAGAAGCCATTGAATACCCTATTGACCATAAGAAAAAGG chr4 + 94230402 64726611 64726610 64726714 64726611 64726610 64726714 104 ATTCTTTATCACATATTTACAGAAAAAAAAGGAATAGAAGAACTGAGGAGGAAAAAAAAATGAGGCAGAAGTCATTTAATTGCTACTTAACAACAGAAGAAAGG .:.::..:..x..x.xxxx..:.:x:....::..x.:.....xx..::...............::x.....:....x...xx.:xx..:..x.:.::.:..... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% -15111535 -79118867 +3189 chr4 + 190214555 49629353 49629352 49629411 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -26403853 -67826549 +3591 chr4 + 190214555 49630071 49630070 49630143 73 TGCACCTGTACTTCCAGCTACTCCAGAGGCTGAGGCAGGAAAATCACTTGAACCTGGGAGGCAGAGGCTGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....x...........:x.:........x.xx.x:..x..........::.:..x:xx:........ 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -26403134 -67827268 +3279 chr4 + 190214555 51834059 51834058 51834121 63 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTTTTCTTCTTTCTTTTTTTTTTCTTTTTTT chr4 + 94230402 69568212 69568211 69568273 69568212 69568211 69568273 62 TTTCCTCCTTTGTCTCTC-CTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT .:..:::..:.x......-....x.........:.:x....xx............:....... 18M1D44M 49/62 79.0% 62/94230402 0.0% 1/62 1.6% -17734153 -76496249 +3792 chr4 + 190214555 51838944 51838943 51839004 61 GTGTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x....:.:............:........x.xx.x...x.............:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% -24194260 -70036142 +3096 chr4 + 190214555 51839092 51839091 51839163 72 AGAGAGAAAAGGAAGGAAGAAGGGAAGGAGAGAAGGAGGGAATGAGGGAGGGAAGGAAGGAA-GGAAGGAAGG chr4 + 94230402 73744717 73744716 73744789 73744717 73744716 73744789 73 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG .:..::.....:....:.:.:.....:....:....:.::..x.:...:..x::..x...::-....:.x.:. 62M1I10M 48/72 66.7% 73/94230402 0.0% 1/72 1.4% -21905625 -72324777 +3498 chr4 + 190214555 51839102 51839101 51839252 151 GGAAGGAAGAAGGGAA------GGAGAGAAGGAGGGAATG-AGGGAGGGAAG-----------GAAGGAAGGAAGGAAGGAGAAGGAAGGAAGGAAGAAAGGAGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAAGAAAGAAAGAAAGAAAAGAAGGAAAGGAAG chr4 + 94230402 57603942 57603941 57604110 57603942 57603941 57604110 169 GGAAGAGAGAAAATAATTCATAGAAAAGAACATGGAAACACAGGGACAGATGTAAATACCCCTGACAGGAGGAAGACATGGGCAATAAGAATAACTGAATGTGTGAGAAAGGACTAAAAGAAGGCAACAGGAAGGGAAAGAATGCATGTCAGAGAAGAGGGGAAGGAAG .....::....::x..------.:.:....x:x..:..::-.....x:..x.-----------..x:.:......:x.x.:.x.:x...:.x::xx...x.x:x:..:.....xx:..:.....x.:x...:.:........x.x.x.xx...:....:..:....... 16M6I18M1I11M11I106M 96/151 63.6% 169/94230402 0.0% 18/151 11.9% -5764840 -88465562 +3406 chr4 + 190214555 51888969 51888968 51889051 83 CGTAGTGATGTGCGCTAGTAATCCCAGCTACTCAGGAGGCTGAGGCACAAGAATCACTTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....:..::..:--...:.:.........::::........x.x::x...x.......:.....:..x.xx:..:..:.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -24144228 -70086174 +3168 chr4 + 190214555 51933866 51933865 51933916 51 ATATATATACACACACACACACACACACACACACATATATATACACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:........:::......:.x..x:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 5793010 NA +3171 chr4 + 190214555 51933868 51933867 51933913 46 ATATATACACACACACACACACACACACACACATATATATACACAC chr4 + 94230402 46140856 46140855 46140901 46140856 46140855 46140901 46 ATATATATACACACACTCTCACATACACACACGTGTATATACAGAC .......:........x.x....:........:.:........x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 5793012 NA +3022 chr4 + 190214555 51933894 51933893 51933951 58 ACACACATATATATACACACACATATATACACACACACATATATATATACATATATAT chr4 + 94230402 74526066 74526065 74526123 74526066 74526065 74526123 58 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ....xx.x..x:.:.........:..:x...:.....x.......::..:....:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -22592172 -71638230 +3038 chr4 + 190214555 51962787 51962786 51962830 44 CCTTTCTCATTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980311 44980310 44980354 44980311 44980310 44980354 44 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ....:..:x.........:x.:............:......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 6982476 NA +3076 chr4 + 190214555 51966148 51966147 51966214 67 CTTCCCTCCTCCCTCCTTCCTTCTCCTTCCCTCCCTCCCTCCTTCCTTTCCTCCTTCCCTCCTTCCC chr4 + 94230402 69760845 69760844 69760911 69760845 69760844 69760911 67 CTTCCCACTGTGTTCCCTCTGTCATCTTTCCTTACACCTTCTCTCCTTTCCACCTTCTCTCCTTTCC ......x.:x:x:...:..:x..x:...:...:x.x..:..::........x.....:......:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -17794697 -76435705 +3186 chr4 + 190214555 51966183 51966182 51966274 92 TCCCTCCTTCCTTTCCTCCTTCCCTCCTTCCCTCCTTCCTTCCTTCCTTTCCTCCTTCCCTCCTCCCTCCTTCCTTCCTTTCTTCCCTCTCT chr4 + 94230402 53764544 53764543 53764635 53764544 53764543 53764635 92 TTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCAGACTCT .:..:.::..........:........:...x:x.::x:....::::x:.:...:x:.::.:...x:..:.x:.x...:....:.xxx.... 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% -1798361 -92432041 +3241 chr4 + 190214555 51966218 51966217 51966303 86 TTCCTTCCTTCCTTTCCTCCTTCCCTCCTCCCTCCTTCCTTCCTTTCTTCCCTCTCT-CCTTTTCTCCTTCCTTTTTTCCTTCCCTC chr4 + 94230402 53764543 53764542 53764628 53764543 53764542 53764628 86 TTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTC-CCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..:.::.::..........:........::..x.x::.x..:.-::...x.:.....-.........x...:.x.:x...:.:.::. 43M1D13M1I29M 58/85 68.2% 86/94230402 0.0% 2/85 2.4% -1798325 -92432077 +3161 chr4 + 190214555 51966270 51966269 51966351 82 TCTCTCCTTTTCTCCTTCCTTTTTTCCTTCCCTCCCTCCTTTTCTCCTTCCTTCTCTCCCTCCTTTTCTCCTTCCTTCCCTC chr4 + 94230402 57538430 57538429 57538510 57538430 57538429 57538510 81 TCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCC-TTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC .....:..xx.:.x:.x.:....:.:....x........-..:.....x::x.:.:::.:......x:...:...:...::. 39M1D42M 54/81 66.7% 81/94230402 0.0% 1/81 1.2% -5572160 -88658242 +3151 chr4 + 190214555 51966289 51966288 51966370 82 TTTTTTCCTTCCCTCCCTCCTTTTCTCCTTCCTTCTCTCCCTCCTTTTCTCCTTCCTTCCCTCCTTCCTTTTCTTTCTTTTT chr4 + 94230402 45957265 45957264 45957346 45957265 45957264 45957346 82 TTTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTCAGCTACTTGCTATTT .......:..:...:........::x.::.x::x..x::::..:..x:.:.....x...:.......xx:.x...x..x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 6009024 NA +3635 chr4 + 190214555 51983275 51983274 51983400 126 TTCTCAGAGATTTGTTTTCTGTTGTTGTTGTTTGTTTGTTTGTTTTGTATACAGGT---------ACCCAGTGTGGTACACAGATTTTTATTT---TTTATTTTTTTATTTTATATATATGCATATACTTTATATACA chr4 + 94230402 23878820 23878819 23878951 23878820 23878819 23878951 132 TTTTCAGGTATTC--TTTTTGTTGTTGTTGTTTGTCTGTTTGTTTTACCTACAGGTTTAATATACATCCAAT-TAAAAAGAAAGTATATACCTAAGTTCAAATTATTGTACtatatatatgtatata---tatatata ..:....:x...:--...:................:..........::x.......---------.:...:.-.::x.x:x.::.x.x..::.---..:.xx..x..:.x:..........:.....---......:. 13M2D41M9I7M1D20M3I31M3D8M 88/120 73.3% 132/94230402 0.0% 18/120 15.0% 28104455 NA +3229 chr4 + 190214555 52031384 52031383 52031466 83 ATTCATCTCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCGCATATCTATG chr4 + 94230402 85834534 85834533 85834616 85834534 85834533 85834616 83 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ......:.x...x.........:.......:.xx:...:x.::.:::.:...:x:.:::...x.:.....:.::.:.:x:... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% -33803150 -60427252 +3139 chr4 + 190214555 52031404 52031403 52031503 100 GTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCGCATATCTATGAGTTCTTAATTGTTCCTTTTAATT---TTTTTTTTTTTTG chr4 + 94230402 79265519 79265518 79265621 79265519 79265518 79265621 103 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTG ..:..........::........xx...:.:.:::.::::.....::.....:x.:..x.x..x..:.x:..:xx:..:x.x...x.---:...x::...... 87M3I13M 63/100 63.0% 103/94230402 0.0% 3/100 3.0% -27234115 -66996287 +3114 chr4 + 190214555 52031407 52031406 52031465 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCGCATATCTAT chr4 + 94230402 79265520 79265519 79265578 79265520 79265519 79265578 59 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT ............::........xx...:.:.:::.::::........:....x.:x... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -27234113 -66996289 +3031 chr4 + 190214555 52034350 52034349 52034415 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAATGGTTGCATTTGTACAGAACATGTACGACTTTTT chr4 + 94230402 47271166 47271165 47271229 47271166 47271165 47271229 64 AAAAAAAGAAAAGAAAGAAAAAAAAGGGGGAATAATTGCATTAAAAC--AATCTGTGCCATATTTT .......:....:...:........::......::.......x:x..--..:x...:.x.:x.... 47M2D17M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 4763184 NA +3428 chr4 + 190214555 52077244 52077243 52077337 94 TTCCCTCCATCCCTCCCTCCCTCCCTCCTTTCTTTCCTTCCTCTTTGTTTCTTCCCGTCTCTCTCCCTCTC-TCCTTCCTTCCCTCCCTCCCTTC chr4 + 94230402 63998163 63998162 63998257 63998163 63998162 63998257 95 TTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTC ....:.:.x..:::x:x.......:.....x..x......::...x:..:...:..:...:..x....:.:-:....:xx:.:.x::..x..... 71M1I23M 61/94 64.9% 95/94230402 0.0% 1/94 1.1% -11920919 -82309483 +3068 chr4 + 190214555 52114295 52114294 52114340 46 ATTTTTCTTTTTCTTTTTTTTTTTTTTGAGACAGTCTCCCTCTGGT chr4 + 94230402 43191276 43191275 43191321 43191276 43191275 43191321 46 ATTATTCTTTTTTTTTTTTTTTTCTCCAAGATAATCTCCCTTTGGT ...x........:..........:.:::...:.:.......:.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 8923019 NA +4063 chr4 + 190214555 52117399 52117398 52117501 103 GATTTTGGGCAATTTCATTATCCTCTTTGTATTTTAATTTCTCCATCTGTAAAATGGAGCTAATGATAA-TACTTATCTTGTAGTGATGTTTTTCAAGGCTCAA chr4 + 94230402 83501141 83501140 83501242 83501141 83501140 83501242 102 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGT--GAGGCTAAA ..:.:.......x..xx...x...x.x...:::.:.:...::...:...............:..::...-...:..:..:::..x.:.:..x.--:.....x.. 69M1I23M2D9M 71/101 70.3% 102/94230402 0.0% 3/101 3.0% -31383742 -62846660 +3080 chr4 + 190214555 52139670 52139669 52139752 83 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:.........::::........x.xx.x...xx:.x.........:..x.xx:.x:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -23893527 -70336875 +3184 chr4 + 190214555 52139780 52139779 52139835 56 AGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAGGA chr4 + 94230402 13073563 13073562 13073618 13073563 13073562 13073618 56 AGGGCAACTTTGTGTTTTTAAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGA ..:....xx:.x...:.:x...............xx:................:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 39066217 NA +3095 chr4 + 190214555 52139797 52139796 52139832 36 CAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAA chr4 + 94230402 75300455 75300454 75300490 75300455 75300454 75300490 36 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA ...................:.............:.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -23160658 -71069744 +4465 chr4 + 190214555 52159095 52159094 52159219 125 CTCCTTTCTTTTCTTTTCTCTTTTCTTTTCTCTTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTCTCTTTCCTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTT chr4 + 94230402 48874868 48874867 48874992 48874868 48874867 48874992 125 CTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ...::.....:x.x.x........:x.xxx.....x:....:..:.x...:..x::.x.........x...x..x...:........x::......x.:.:::xx.x.:.x.x...:.:.::... 125M 82/125 65.6% 125/94230402 0.0% 0/125 0.0% 3284227 NA +3446 chr4 + 190214555 52159107 52159106 52159221 115 CTTTTCTCTTTTCTTTTCTCTTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTCTCTTTCCTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTT chr4 + 94230402 4550074 4550073 4550188 4550074 4550073 4550188 115 CTGCTCTCACATCTTCCCTCTGTGCTTTCCCTCTTTCTTCTTTCCTCCTCAGCTAATGTTGGGATTTTTTTTGTTGGCTTTTTTTTTTTTTGGCCTTTCTTTCTAGTTTCCATTT ..x:....x:x....::....x.x.....::.............:.:..:xx:.xx.x.:xxxx...:..:.x..xx...:...:...:.:xx:..:.......xx:..:.x... 115M 72/115 62.6% 115/94230402 0.0% 0/115 0.0% 47609033 NA +3014 chr4 + 190214555 52163715 52163714 52163778 64 TAAAAATGGTATAGAAAAATAGCATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATA chr4 + 94230402 24523890 24523889 24523953 24523890 24523889 24523953 64 TATAAATAACATGAAAATACAACAGGCATATATATATGTTTACTTGTGTGTGTATATATATATA ..x....:::..::...x.:.:..x.:..:.:.:.:...x.::x.........:.......... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 27639825 NA +3181 chr4 + 190214555 52274438 52274437 52274515 78 AGTGAAACACCATCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAGAATCAGTGCAAGA chr4 + 94230402 1494996 1494995 1495058 1494996 1494995 1495058 63 AGGGAAACA-------GAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA--------TGCAAGA ..x......-------:.........x.:...............:.:..:...:.....x...--------....... 9M7D47M8D7M 54/63 85.7% 63/94230402 0.0% 15/63 23.8% 50779442 NA +3084 chr4 + 190214555 52274451 52274450 52274495 45 CTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 88547318 88547317 88547362 88547318 88547317 88547362 45 CTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ...................xx........:...:.:.:.:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -36272867 -57957535 +3746 chr4 + 190214555 52332909 52332908 52332977 69 CATGGTGGTGCATGCTTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::........:.--....:.:...........:.........x.xx.x...x..........::.:. 14M2D53M 53/67 79.1% 67/94230402 0.0% 2/67 3.0% -23700288 -70530114 +3018 chr4 + 190214555 52364997 52364996 52365060 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGATATATATATATATATATATATATATAAATTTGAC chr4 + 94230402 49163132 49163131 49163195 49163132 49163131 49163195 64 AGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAAC .:...:...............:..x...xxx.:.x.:.:.::.......x:.x.......::.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 3201865 NA +3048 chr4 + 190214555 52364999 52364998 52365051 53 AAAAAAAAAAAAAAAAAAAAAAAAAAGATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x.x......:.:..:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 50869999 NA +3171 chr4 + 190214555 52365001 52365000 52365052 52 AAAAAAAAAAAAAAAAAAAAAAAAGATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:......x........:.:..:...:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 50870001 NA +3131 chr4 + 190214555 52365003 52365002 52365055 53 AAAAAAAAAAAAAAAAAAAAAAGATATATATATATATATATATATATATAAAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:....:..........:.:..:...:.....x.x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 50870003 NA +3060 chr4 + 190214555 52374409 52374408 52374455 47 TTACTTTCTGTATGTTTGTTTGTTTTGTTGTTTTGTTTGTTTGTTTT chr4 + 94230402 28945664 28945663 28945710 28945664 28945663 28945710 47 TTTTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTT ..x:...x...:........xx.x....................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 23428745 NA +3328 chr4 + 190214555 52378477 52378476 52378551 75 GACCATTGAAAGAAAAA---GAAACAAACAGAAAGCAACAACAGCAGCATCAACAACAATAACAAAAAAAAAAAACCC chr4 + 94230402 42575000 42574999 42575077 42575000 42574999 42575077 78 GACTAATGACATGAAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCC ...:.x...x.x:....---:.......x.:...x..x..x..x..x..:.........:.....x.......:x... 17M3I58M 57/75 76.0% 78/94230402 0.0% 3/75 4.0% 9803477 NA +3303 chr4 + 190214555 52392382 52392381 52392463 82 TCTCTTTCTCTCTCTCAATCTCTCT----CTCTCTCTCTGTATGCATGTATATAAATATATATATAATATATATATAATATATATT chr4 + 94230402 4618344 4618343 4618427 4618344 4618343 4618427 84 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATAT--ATCTCTATATAGTATAGATATATTATATATT .:.......:x:x.::x........----..........x.::x:...:....--..x.x......:....x.....x........ 25M4I24M2D31M 61/80 76.2% 84/94230402 0.0% 6/80 7.5% 47774038 NA +3955 chr4 + 190214555 52433712 52433711 52433809 98 AAGGCTAATAACTGGGCATAGTGGCATGCACCTATAGTCCCAGCTACTCGGGAGGCTGAGGCATGAGCATCACTTGAGTCCAGGAGTCCAAGGCTGCA chr4 + 94230402 76033187 76033186 76033276 76033187 76033186 76033276 90 AAGGATGATA------CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x.:...------..:.....--.....x.:....:.........:.::........x.x..x.x.x.......::....:..:::x:.....:. 10M6D8M2D72M 67/90 74.4% 90/94230402 0.0% 8/90 8.9% -23599475 -70630927 +3377 chr4 + 190214555 52468645 52468644 52468735 91 TTTTAGCTATTCTAATTACTTTATGTTTCATATAAACACTCCTCTTCCTTTTCTTCCTCCTTCTTTTTATTCTTCTATTCTATTTCCCTAA chr4 + 94230402 15799177 15799176 15799267 15799177 15799176 15799267 91 TTCTAATAGTCTGAATTGCTGTCTGTTCCATATACACATGCCATTTCTCTTTCTTGCTCTCTCTCTTTATTTGTATTCCCTATTTACTGAA ..:..::x:.::x....:..x.x....:......x...:x..x:...::......x...::...:......:x.x.x::......x.:x.. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 36669468 NA +3330 chr4 + 190214555 52490120 52490119 52490236 117 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--------GAAAGA-AAGGAAGAAGAAAGAGAAAG--AAAGAGGAAAGAAAG--GAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .:.:...:...x........x......:..:...--------....x.-..x:......::x..:..x.--....xxx...:...x--:x..x.x::.....:..x....:.x:...:....:...:... 34M8I6M1I20M2I15M2I42M 83/117 70.9% 130/94230402 0.0% 13/117 11.1% -1521473 -92708929 +3651 chr4 + 190214555 52490124 52490123 52490250 127 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAG----AAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:...:..:.x.xxxx...:x.x:.x......:.:x....:----....xxx:..:...xxx.x..x.x.:.::...::x..:::.x...:......:...:... 67M4I60M 81/127 63.8% 131/94230402 0.0% 4/127 3.1% -1521469 -92708933 +4004 chr4 + 190214555 52490129 52490128 52490275 147 AAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAA--AAAGAAAGAAAGAAAAAGAAAGAA---AGAGGAAGAAAGGAAGAAAGAAATAA chr4 + 94230402 84536568 84536567 84536719 84536568 84536567 84536719 152 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAA ...::.:.::........:...x..x...:.x......x::.:.:.:..:.:..::...:..:...:.:xx.x:x..x..:.xx.:x.:xx:...x.--x....:.:.:.x...x....:.:.---:........:.xx.....:.x..x.. 97M2I24M3I26M 92/147 62.6% 152/94230402 0.0% 5/147 3.4% -32046439 -62183963 +3193 chr4 + 190214555 52490148 52490147 52490194 47 AAAGAAGAAA--GAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAG chr4 + 94230402 57629739 57629738 57629787 57629739 57629738 57629787 49 AAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGG ...:......--:...............:......:........:..:. 10M2I37M 41/47 87.2% 49/94230402 0.0% 2/47 4.3% -5139591 -89090811 +3620 chr4 + 190214555 52490192 52490191 52490332 141 AAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGA-----AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148381 51148380 51148516 51148381 51148380 51148516 136 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACG----GAGGGTGAGAGAAAAAAAAGGAA------AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ..:.......xx.x.:.....:...:.........x....:xxx....xx::..x.:..x.x.----:...:x..:.....x.....:..------.....:..:x..x.-----.:.x.x.........:..x:x.xx:..:... 63M4D23M6D14M5I31M 90/131 68.7% 136/94230402 0.0% 15/131 11.5% 1341811 NA +3043 chr4 + 190214555 52490193 52490192 52490262 70 AGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGG chr4 + 94230402 94050835 94050834 94050904 94050835 94050834 94050904 70 AGGAAGAGGGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAAG .......:.:..:.:.::..::..:::.....x...:.:x.:.x.x...:.xx...:...:.......:. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% -41560642 -52669760 +3467 chr4 + 190214555 52490206 52490205 52490350 145 AAAGAGAAAGAAAGAAAGAAAAAGAA------AGAAAGAAAA--AGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGG-GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044808 49044660 49044659 49044808 149 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAG-----AAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .........::..x..:::.xx..::------.......x..--..x:....:x.xx...x:..:...::.::.:.x........-----...:....-...::.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 26M6I10M2I41M5D8M1I55M 91/140 65.0% 149/94230402 0.0% 14/140 10.0% 3445546 NA +3641 chr4 + 190214555 52490206 52490205 52490356 151 AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAA---AGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAG---TAAAGAAGGAAGGGAAG-GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAA chr4 + 94230402 49044653 49044652 49044810 49044653 49044652 49044810 158 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA .....xx..::.::......x....:.xx.:.::x:---.......x.::x::x..:.:.x.xx...x:.x...:.:...---.......:....::.:.-...::.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:...... 36M3I41M3I17M1I57M 93/151 61.6% 158/94230402 0.0% 7/151 4.6% 3445553 NA +3505 chr4 + 190214555 52490247 52490246 52490326 80 GAAAGAGGAAGAAAGGAAGAAAGA------AATAAAAGAAAGTAAAGAAGGAAGGGAAGGA----------AGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 61683535 61683534 61683630 61683535 61683534 61683630 96 GAAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAA ....:.........:x..:..:..------..x:.......:...............x...----------......:x.xx.....:x.:..:.. 24M6I31M10I25M 63/80 78.8% 96/94230402 0.0% 16/80 20.0% -9193288 -85037114 +3935 chr4 + 190214555 52490263 52490262 52490392 130 AAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGAAGGAAGGAAGGA------AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGTAAAGAAAGAAAGAGGAAGGAA---GGGGCCAGG chr4 + 94230402 49044661 49044660 49044799 49044661 49044660 49044799 139 AAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGG ....:.:..:x.x....:.x..::.:x..xx:.:...:x.:.x..x:..:.------..x:..:....:.:..:xx..:...:....:....x:::...x.....x..........x..:.x..:..---.:.:.:... 51M6I70M3I9M 84/130 64.6% 139/94230402 0.0% 9/130 6.9% 3445602 NA +3105 chr4 + 190214555 52490651 52490650 52490722 72 AGTGAGACTCCATCTCAAAA-----AAAAAAAAAGAAAGAAAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 91777247 91777246 91777323 91777247 91777246 91777323 77 AGTGAAACTGCAAAACAAAACAATAAAGAAAAAAGCAAGGAGGAGGTAGGAAGGAGGAGAGGAAAAAAATAGAAAAG .....:...x..xxx.....-----..:.......x...:.:....x........:.::.....::..:x.:::... 20M5I52M 52/72 72.2% 77/94230402 0.0% 5/72 6.9% -39286596 -54943806 +3877 chr4 + 190214555 52510965 52510964 52511034 70 TATGTGTGGCCCAAGATAATTCTTCTTCTTCCAATGTGGCCCAGGAAAGCCAAAAGTTTGGAAACCTCTG chr4 + 94230402 43915637 43915636 43915706 43915637 43915636 43915706 70 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATG ...:.....:...........::.:...x::x......x.....:x...x............x:..:x.. 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% 8595328 NA +3194 chr4 + 190214555 52510973 52510972 52511034 62 GCCCAAGATAATTCTTCTTCTTCCAATGTGGCCCAGGAAAGCCAAAAGTTTGGAAACCTCTG chr4 + 94230402 47258242 47258241 47258303 47258242 47258241 47258303 62 GCCCAATGCAGTTCCTCTCCAGTCCACGTAGCCCAGGTAAGCCCAAGGGTTGGAGACCTCTG ......x::.:...:...:.xx:.x.:..:.......x.....x..:.x.....:....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 5252731 NA +3484 chr4 + 190214555 52528307 52528306 52528436 130 CCCTAGAACTTAAAGTCTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAA-----------GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAA chr4 + 94230402 54011578 54011577 54011723 54011578 54011577 54011723 146 CCCTAGTAATTTA--TTAGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ......x.x..x.--.:x..:...:...x........x......:..:....-------....x.x.:x......:.:x:..:.x:xx..::xxx...:...-----------..:.:....x....:.x:...:..:....:.:... 13M2D37M7I43M11I35M 88/128 68.8% 146/94230402 0.0% 20/128 15.6% -1483271 -92747131 +4380 chr4 + 190214555 52528312 52528311 52528509 198 GAACTTAAAGTCTGAGAAAGAAAGAAAGAAAGAAAGAAAGA-------------AAGAAA--GAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAA-----AGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAAGA------AAGAAAAGAAAGAAAAAAGAAAGAA chr4 + 94230402 75995007 75995006 75995235 75995007 75995006 75995235 229 GAGGTTGTAGTCAGAGGAATACCGCACACAAGAAGGTAGGATGAACATGACAATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAAAGAACTAGAAAAACAGCAAGGGAGAAGCAATTATGAAAACAACAACAAAAAAAACCCCAAACAGCAGGCAATGAAGAGAATACAACTTGTTAAGAAAAGGAGAAAAACAGAAAGAA ..:x..:x....x...:..x.xx.x.x:x.....:.x.:..-------------......--x..::.:......x.......x....:.:.::..-----..:..:x.x.......--.....:.x..x...::....:x:.xx.x....:x..x..x..:...:.---x.:.x..x.:.x..x:....:.:x.x:.------........:.::....x........ 41M13I6M2I34M5I16M2I48M3I28M6I25M 134/198 67.7% 229/94230402 0.0% 31/198 15.7% -23466695 -70763707 +3745 chr4 + 190214555 52528317 52528316 52528486 170 TAAAGTCTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 84536556 84536555 84536724 84536556 84536555 84536724 169 TGAGGCCTTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAG-AAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAA .:.:.:..x:xx...::.:.::........:...x..x:...:x.:...:x:..::...:.:::.:.::..:..:.....:xx.x.x.:x...:xx..x.:xx:.::x.xxx..........x.:.x..-..::..xx.::..:....:.xx.....:.x..:..xx... 129M1D40M 97/169 57.4% 169/94230402 0.0% 1/169 0.6% -32008239 -62222163 +4336 chr4 + 190214555 52528318 52528317 52528487 170 AAAGTCTGAGAAAGAAAGAAAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAAA-------------------GAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAA---------GAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 5778582 5778581 5778784 5778582 5778581 5778784 203 aaaGGATGAAAAAGGATGAAAGAAATATTTATGAGAAGAGATGAAATGTGGAAAAAGAATGGTGGTCATATGCTGGTTGAAGGAAAAATAAATAAATAAGAATAGAAGAGAAGGGATGGAGAAAGACAGAAATGAGAGAGAAGTAAGCACACCTATTACAGAAAAGCTAATGAATATCAAAAAAACAAGGGAAAGGAAAAAGG ....xx...:....:.x........x.-----:....:::.x....x:x:....:.:..-------------------...:......x...x...x..::.x....:::...::.x::.......x.....x:.:......:x..:---------x.x......:xx..x:..x.xx:...:..x:.::.....:..:..:. 27M5I27M19I69M9I47M 112/170 65.9% 203/94230402 0.0% 33/170 19.4% 46749736 NA +3390 chr4 + 190214555 52528328 52528327 52528440 113 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA-----------GAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....-------....x.x..x......:::x:..:.x:xx..::xxx...:...-----------..:.:....x....:.x:...:...:.:...:... 35M7I43M11I35M 77/113 68.1% 131/94230402 0.0% 18/113 15.9% -1483265 -92747137 +4325 chr4 + 190214555 52528329 52528328 52528600 272 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA-GAAAGAAAGAAAGAAAAAGAAAGAAA---GAAAGAAAAAGAAAGAAA-----------GAAAGAAAGAAAGAAAGAA chr4 + 94230402 23740008 23740007 23740290 23740008 23740007 23740290 283 AAGATGTAAGAGGAGATGGAAAGTAGTTGAGTAGCTCAAAAAAGGAATTACAGGAAATATAGGGAACAAGGGAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAA-------AGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAGTAACTATGACTGCGGGAAAAGAAAAGTGGGACAAGTGACAGCATGTGAACAAAATTATTTGTTTGAGAAGAAGCAAAGAAAGAA ....x:x..::::...x:.....x.:xx:..x.:xxx.:.....:..xx.x.:....x.x..::.:x...::.:x....:..x....:.:..x---...x.:x..x:.x.::.:.:.xx..:..:x...-------..x..x.::xx..x.::xx...:x...:::....:......:...:....:.x.x..:..x.x.......x..xx.-..xx.x::....::.....x::..x.---..x..x.x:x...x:...-----------::.....:x.......... 93M3I33M7D76M1I26M3I18M11I19M 160/265 60.4% 283/94230402 0.0% 25/265 9.4% 28788321 NA +4955 chr4 + 190214555 52528343 52528342 52528557 215 GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGA chr4 + 94230402 65771126 65771125 65771337 65771126 65771125 65771337 212 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGG---GCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGA-AAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA ....:.::x.:..:..x.::.x..:x.....x.....x.xx.:.x.:.---.xx..x......x.xxxx.::.:.xx:..:..:.........x:.....:......:x.x.:...x-.:..:..::.....xx.:..x:.-...x.:.x.xx..:.::...::...:.:x...x...:.:x.x......x..x:.x....xx..x..:.....:. 48M3D66M1I23M1D74M 132/211 62.6% 212/94230402 0.0% 5/211 2.4% -13242783 -80987619 +3081 chr4 + 190214555 52528367 52528366 52528450 84 GAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAA chr4 + 94230402 36524350 36524349 36524433 36524350 36524349 36524433 84 GAAAATTAAGCAGATGAAAGTAAGGAAAGAAAAAAGTGGGACTGGCGAATAGAGAGAAAAAGAATAGAAGTTGAGAAAGAAAGA .....xx...x.:.x.....x...:..::..:....x::..xx.:x::.x...:.....:.:..x....:xx:.........:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 16004017 NA +3507 chr4 + 190214555 52528369 52528368 52528489 121 AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAA----AGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAG----AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011595 54011594 54011723 54011595 54011594 54011723 129 AAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ...:...:.x........x......:..:....:x.----::..x:x..x......:.:x::...x.xx....----...:..xxx.x.:x.x:..:.:....x....:.x:...:..:...:...:.. 36M4I33M4I52M 80/121 66.1% 129/94230402 0.0% 8/121 6.6% -1483226 -92747176 +3966 chr4 + 190214555 52528371 52528370 52528501 131 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .....:.....x........x......:..:....:x.xxxx::..x:x..x......::.x....:x:xx....xxx..:...:xxx:x.:x.x:..:.:....x....:.x:...:...:...:..... 131M 83/131 63.4% 131/94230402 0.0% 0/131 0.0% -1483222 -92747180 +3591 chr4 + 190214555 52528375 52528374 52528505 131 AGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .......:...x........x......:..:....:x.xxxx::..x:x..x...::..::x....:x:xx...:xxx..:...:xxx:x.:x.x:..:.:....x....:.x:..:....:......:.. 131M 80/131 61.1% 131/94230402 0.0% 0/131 0.0% -1483218 -92747184 +3416 chr4 + 190214555 52528403 52528402 52528509 107 AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGA------AAGAAAGAAAAAGAAAGAAAGAAAG----AAAG---AAAGAAA-----------GAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x.......:..:..:.------:.:.x.x..x..::...::x....:----....---...:...-----------..:.:....x....:.x...:.......:...:.. 36M6I25M4I4M3I7M11I35M 79/107 73.8% 131/94230402 0.0% 24/107 22.4% -1483190 -92747212 +3260 chr4 + 190214555 52528405 52528404 52528508 104 AGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAA----AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGA chr4 + 94230402 89498607 89498606 89498714 89498607 89498606 89498714 108 AGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGA ..:..:.:.:.x:...:.:..x....:x.x.:..:----.::....:x..:..:x...x.::..::..:x::.x...x........:.:....x..:x.:.:...... 35M4I69M 65/104 62.5% 108/94230402 0.0% 4/104 3.8% -36970202 -57260200 +3551 chr4 + 190214555 52528417 52528416 52528529 113 AGAAAGAAAGA-----AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::.-----.:.....:...:.........x....:xxx....xx:..:x:::.x.x::..::x..:......:....:....:..::..x..------:...x.x...:...:.:. 11M5I84M6I18M 75/113 66.4% 124/94230402 0.0% 11/113 9.7% 1380038 NA +3108 chr4 + 190214555 52528421 52528420 52528503 83 AGAAAGAAAAGAGAAA-----GAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:...x..:..-----..x............:..........:...x.:::xx...:.:.:x:...x.x...::.x..x:... 16M5I67M 58/83 69.9% 88/94230402 0.0% 5/83 6.0% -22713086 -71517316 +3306 chr4 + 190214555 52528424 52528423 52528550 127 AAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAA----AAGAAAGAAAGAAAGAAAGAAAGAAAGA-----AAGAAAAGAGAAAGAAAGAAAG chr4 + 94230402 10269758 10269757 10269893 10269758 10269757 10269893 136 AGGCAAAGAAATATCAGAAATGTAAAGGTATTTCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .:.x.....:.x.xx.::..x.x...:.x.xxxx.:.x.....:.x..x:.:.:.::....:.:x.......x....----......::x.x:.....x:..:......-----::...:......x:..x...:. 77M4I28M5I22M 82/127 64.6% 136/94230402 0.0% 9/127 7.1% 42258666 NA +3321 chr4 + 190214555 52528425 52528424 52528540 116 AGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAA chr4 + 94230402 24042737 24042736 24042850 24042737 24042736 24042850 114 AGGCAACAGTAGGAGTGAAAGAGTAA--AAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAA ..:x..x..x.:..:x......:x..--...x.:x...::..:....:x.....:x...:..:..:...x.:.x.:..:xx.x.x.:.x.x.x.....x...x....:....x:.. 26M2D88M 74/114 64.9% 114/94230402 0.0% 2/114 1.8% 28485688 NA +3690 chr4 + 190214555 52528431 52528430 52528677 247 GAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAAG------AGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGA chr4 + 94230402 41925062 41925061 41925321 41925062 41925061 41925321 260 GAGGAAAAAAAAAACAAAAAAAAACACAGGGAGACAATCAGGTACATCACGTGAAAGTGAAGGAATAACAGAGTAAGGCGGAGGGAAAGCATGAGAGCAAGAGAGAAATGTTCTCTAGGGGAGATGACAGAATGGGAATGGCACAAGGGAGCTGGTGGAAGATCAAAATAGAGTTCAGAAAACTGAGAAAGGATTAAAGGGAGCCCAAGATACTTTGTGAGGATCAGAGAAAAATGAAGGGGGTGAGAGTCAGAAAAAGA ...:..:...:...x.....:...x.x..::...x.:xx..:x.x.xx:x:x.....x:...:..x..x.:..x..----..::.....x.x..:..x....:.....x.------..:::::.x..x....x::...x.:x.x..:.:.:xx.:x:...-.xx..:.x...:xxx.::...xx:......:.xx....::..--x....x.xxxx.x::.:.xx.::...::.x.:.:..::x..:..xx.....:... 76M4I30M6I44M1I42M2I55M 144/247 58.3% 260/94230402 0.0% 13/247 5.3% 10603369 NA +4007 chr4 + 190214555 52528438 52528437 52528581 144 AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAAGAAAGAAAAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAG--------AAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 74078573 74078572 74078728 74078573 74078572 74078728 156 AAAGGTAGAGCCACACAGAGAGGCCAAAACTAAACAAAAATGTTATAAAAGGAAAAGAAATATATAAGGCAAAGAAGGAAAAAAAGAATGTTAGAATGTTGCAGTTTAAACAGAAAAGAGGAAAGGAAAGGAAAGAAGATCAAGAACACAAAGAAA ....:x...:xx.x.x...:..:xx:...xx..:x..:..x.--.x.:..:.........x.x.x...--......:....:......x.xx....x.--------x...x.....::.:.....:...:.......::xx.::..x.x....... 42M2I24M2I28M8I50M 99/144 68.8% 156/94230402 0.0% 12/144 8.3% -21550135 -72680267 +3188 chr4 + 190214555 52528443 52528442 52528563 121 AAGAAAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 53385264 53385263 53385387 53385264 53385263 53385387 124 AGGAAACGAGAAGAACTGGAGAAATAATCTCAACTGGAGTTGAGAAAGAAAAGAAAGAAAAAGATAAGAAAAACTGGCTGTGCTAGAGAAAGGTGAGGGGGGAAAAAAAACAACAAAAGAAAAA .:....x:::.....xx::.....x..---x:.xx.:.:xx:....................::x......:.xx.:xx.x:xx.:......:x:..:.::::...:...x..x..:.:.:... 27M3I94M 74/121 61.2% 124/94230402 0.0% 3/121 2.5% -856821 -93373581 +3773 chr4 + 190214555 52528444 52528443 52528570 127 AGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .......:...x........x......:..:....:x.---x....x.x..x......:::x....:x:xx....-xx.:...:.xxx.x..x.x:......:.:x:.:...x:...:..:...:...:.. 38M3I34M1I55M 85/127 66.9% 131/94230402 0.0% 4/127 3.1% -1483149 -92747253 +3900 chr4 + 190214555 52528445 52528444 52528620 176 GAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGA-----------AAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75176340 75176339 75176519 75176340 75176339 75176519 180 GAAAAACAAAGAAGGAAGGGCAAATAGAAG------AAGCAAGAAAACAATGCATTATTTCAGATATTACAACTACTCCTTAGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGAC-AAGGAAGGAA ......x......:...:.:x.:.x....:------...x.......x..x.x.xx.xxxx...x.xx.x:.-----------..x..:x..xx.:x...x....x.x...:x.:.......:....:.:...:x.....xx......:.:..:..x:......xx..x:.:.:.x-..:...:... 30M6D36M11I93M1D10M 112/169 66.3% 180/94230402 0.0% 18/169 10.7% -22647895 -71582507 +3626 chr4 + 190214555 52528452 52528451 52528573 122 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAG---AAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAG-AGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....-------....x:x..x...:...::x....:x:xx....---...:...xxx.x.:x.x:..:.:....x...-.:.x...:....:...:..... 35M7I33M3I31M1D22M 84/121 69.4% 131/94230402 0.0% 11/121 9.1% -1483141 -92747261 +3057 chr4 + 190214555 52528464 52528463 52528602 139 AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGA--AAGAAAAAGAAAGAAAGA--AAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 78266968 78266967 78267110 78266968 78266967 78267110 143 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAACATTATGAAAACAAAATATGGCCAAGGGAATAGTAAGGAAG ..::...x.....xx:...:...:..xx:....::......:.......:......x.xx..::xx...x...x:x..:..x:.--...xx..xx:..x...x.--.x.....x:...x.x:.xx.:::::.x..x...:... 84M2I18M2I37M 87/139 62.6% 143/94230402 0.0% 4/139 2.9% -25738504 -68491898 +3328 chr4 + 190214555 52528464 52528463 52528581 118 AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAA---------AGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAA-AAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .:.:...:...x........x.......-..:.....x.----....x.x.:x..::...::x....:x:xx...:xxx...:..---------.x::........x....:.x:...:....:...:... 28M1D10M4I42M9I37M 81/117 69.2% 130/94230402 0.0% 14/117 12.0% -1483129 -92747273 +3002 chr4 + 190214555 52528478 52528477 52528561 84 AGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGA chr4 + 94230402 49199996 49199995 49200079 49199996 49199995 49200079 84 AGTGACAAGGAGAAGAAAAAAAAAAAAAAAAAAGGTTGCTATATAGAGGAACAGAATAAGGAGAGAAGCCAAAAAGGAGAAAAA ..x:.x..:..:......:......:...:....:xx.xx.x.x...:::.x....x.::..:....:xx..:..::.....:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 3328482 NA +3586 chr4 + 190214555 52528500 52528499 52528616 117 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAG---AAAGAAA-----------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:.....x.xxxx....x.x.:x...::.::.x:.:..x.xx....---...:...-----------..:.:....x....:.x:...:..:...:...:.. 75M3I7M11I35M 80/117 68.4% 131/94230402 0.0% 14/117 12.0% -1483093 -92747309 +3734 chr4 + 190214555 52528522 52528521 52528654 133 AGAAAGAAAGA-----AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::.-----.:.....:...:.........x....:xxx....xx:...x.:..x.x:..::.x:...:.:...:..:....:::..::.x.:x:xxxx:...x.x.........:..x:x.xx:..:... 11M5I122M 83/133 62.4% 138/94230402 0.0% 5/133 3.8% 1380143 NA +3225 chr4 + 190214555 52528524 52528523 52528646 123 AAAGAAAGAAAAGAGAAAGAAAGA-----AAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----AGAAAGAAGGAAGGAAGGAAGG chr4 + 94230402 10269762 10269761 10269893 10269762 10269761 10269893 132 AAAGAAATATCAGAAATGTAAAGGTATTTCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .......x.xx...:.x:x....:-----x.:.x.:.:...x.:x.......:....:.:x..::..:x..:.::xx......::x.x:.....x:..:......:----:.:....::...x:..x..... 24M5I77M4I22M 78/123 63.4% 132/94230402 0.0% 9/123 7.3% 42258762 NA +3429 chr4 + 190214555 52528526 52528525 52528600 75 AGAAAGAAAAGAGAAA-----GAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..:...x..:..-----..x............:..........:...x..:.xx.:......x..:.x.x..:.:. 16M5I59M 57/75 76.0% 80/94230402 0.0% 5/75 6.7% -22712981 -71517421 +3140 chr4 + 190214555 52528527 52528526 52528590 64 GAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 56923936 56923935 56923999 56923936 56923935 56923999 64 GGGAAACAAGAGAAAAAAAAGAAGAAAAAGAAATAAAGTTAAAAACAGAAGTGAATAAAGTAAG .::.:.x........:...::............x....xx.:...x....:x:..x....x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -4395409 -89834993 +3045 chr4 + 190214555 52528530 52528529 52528604 75 AGAAAAGAGAAAGAAA-----GAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x.:..:.x..:..-----..x.....:.:....:............:.x..:.xx.:......x..:.x.x..:.:. 16M5I59M 54/75 72.0% 80/94230402 0.0% 5/75 6.7% -22712977 -71517425 +3014 chr4 + 190214555 52528577 52528576 52528653 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x...........:.x:x.::...x:.....:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 11416399 NA +3062 chr4 + 190214555 52528628 52528627 52528700 73 AAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGAGAGAAGAGGAAGGAAGGAAGGAA chr4 + 94230402 86730449 86730448 86730521 86730449 86730448 86730521 73 AAGACGAAAGAAAAAAAAGGAGGCAGGTTAAGAGCAAATGAAGAAAAGGAGAGCAAAGGAGAAAAAGCAGGAA ....x.:...:..::..:.:...x...xx:::..x...x:......::.....x.:....:::..:.x..... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -34201821 -60028581 +3456 chr4 + 190214555 52547846 52547845 52547916 71 CACATGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAGTCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:......:.........::::........x.xx.x..:x.:...........:..x:xx:..:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -23485361 -70745041 +3315 chr4 + 190214555 52563513 52563512 52563625 113 AGAGAGACACAGACAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGAAAGAGAGAAAGAGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044704 49044703 49044808 49044704 49044703 49044808 105 AGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGT--------GAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ..x....x:..xxx..x:......::....:xx.......:.......:x--------....:.x.:...:..:.......x....x.:::..xx:..:xx:.:.:..:.... 50M8D55M 69/105 65.7% 105/94230402 0.0% 8/105 7.6% 3518809 NA +6729 chr4 + 190214555 52563582 52563581 52563744 163 GGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAAAGGAAGGAAGGG-------------AAGGGAAGGAAAGAGAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGGAGAGAAAGAAAGAAAA chr4 + 94230402 1500702 1500701 1500877 1500702 1500701 1500877 176 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaa .....::.....:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:......:.::x...::.x.-------------..:.........:x.::...:.............:x:....x.:.::.:....:..:.:::.::::::.:...:..:.:..:........ 73M13I90M 106/163 65.0% 176/94230402 0.0% 13/163 8.0% 51062880 NA +4012 chr4 + 190214555 52563615 52563614 52563746 132 GAAGGAAGGAAGGAAGGAAGGAAAGGAAAGGAAGGAAGGGAAGGGAAGGAAAGAGAGAAAGAAAAAGAAAGAAAGAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAA--AAGGGAGAGAAAGAAAGAAAACA chr4 + 94230402 14751871 14751870 14752009 14751871 14751870 14752009 139 GAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAACA ....:..x:..xx:...x..x:::......:::x.:..:::x.x...::x..:.x.x....:x.:.::.....:..:..-----.....:.::...x::....x....:x:...--........x...:..:.:..... 79M5I30M2I23M 84/132 63.6% 139/94230402 0.0% 7/132 5.3% 37811744 NA +3068 chr4 + 190214555 52563662 52563661 52563746 85 GGAAAGAGAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGGAGAGAAAGAAAGAAAACA chr4 + 94230402 73744990 73744989 73745074 73744990 73744989 73745074 85 GGAGAAAAAAAAAAACAAAACAGGGAAGATGGATTGTAGATGGAGAGAGAGAAATAAAAACAAAAGAATAGAAAGCAGTAATACA ...:.:.:.:...:.x...:x.:.:....x.:.xx:x...x:..:...:.....x...:.x...:.:.x......x.:x..x... 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -21181328 -73049074 +3467 chr4 + 190214555 52592700 52592699 52592781 82 ATAGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACTCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....::..:.--......:...........::........x.xx:x...x.:.......:.:.:..x:xx:..:..:.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% -23440498 -70789904 +3724 chr4 + 190214555 52613593 52613592 52613664 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -23419613 -70810789 +3444 chr4 + 190214555 52632900 52632899 52633016 117 GAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148380 51148379 51148502 51148380 51148379 51148502 123 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ......::...xx.x.:.....:...:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:......:.::..x..------:...x.x...:...:.:. 99M6I18M 73/117 62.4% 123/94230402 0.0% 6/117 5.1% 1484520 NA +3108 chr4 + 190214555 52632915 52632914 52632992 78 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 41112182 41112181 41112259 41112182 41112181 41112259 78 AAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::.x... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 11520733 NA +3142 chr4 + 190214555 52632955 52632954 52633030 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.::............:.::.:......x:x..:.:..xx:xx.x...:.:..x.:..:...:.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 14554177 NA +3140 chr4 + 190214555 52666265 52666264 52666369 105 GGGAGGGAGGGAAAGAAAGGAAGAAAGAAAGAGAGAGAGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAATAAAAGAAAGAAAGAGGAAAAAGGGAAGGA chr4 + 94230402 58935720 58935719 58935824 58935720 58935719 58935824 105 GGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAATTGTGCAGGA ....:x...:::..:.x..x:.xx...:..:.:x..:::..:::..:.:x:...:.:x:..:...::.:..:x...:x...::.:..........xx.x.x.... 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% -6269455 -87960947 +3852 chr4 + 190214555 52666296 52666295 52666479 184 AGAGAGAGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAA---TAAAAGAAAGAAAGAGGAAAAAGGGAAGGAGGGAGGGAGGGAAAGAGAAAGAGAAAAGAGGGAGAGAGAAAGAAAAAGAAAAGAAAGAAAGAAGGGAGG---GAGGGAGGGAAAGAAGGAAGGAA---GGAAGGGGAAGGGGAAGG chr4 + 94230402 1317349 1317348 1317532 1317349 1317348 1317532 184 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGG---------AAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGG ....x:::.:.x......:x.x.x..:xx...:.x.:.:.:.:.---.....x.:x::..x.:..xx.::.....:...---------...::.............::x..xx.:..x..:..:x::..:x:..xx..:.......---...:...x:x...x:.....:..---...xxx:...:..:.:.. 44M3I32M9D58M3I23M3I18M 110/175 62.9% 184/94230402 0.0% 18/175 10.3% 51348947 NA +3635 chr4 + 190214555 52666320 52666319 52666466 147 AAAGAAAGAAAGAAAAGAAATAAA--------AGAAAGA-AAGAGGAAAAAGGGAAGGAGGGAGGGAGGGAAAGAGAAAGAGAAAAGAGGGAGAGAGAAAGAAAAAGAAAAGAAAGAAAGAAGGGAGGGAGGGAGGGAAAGAAGGAAGGAAGGAAG chr4 + 94230402 49044660 49044659 49044814 49044660 49044659 49044814 155 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAA-GAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .....:.:..::.x....:..x.:--------.......-...x:.x:.:.:.x.xx:..x...::......-...xx.:.....::..::..:x::...:x:...............x....x:::::.xx...:xx.:....:::.:..:x:.. 24M8I7M1I32M1D83M 91/146 62.3% 155/94230402 0.0% 10/146 6.8% 3621660 NA +3254 chr4 + 190214555 52666380 52666379 52666468 89 GAAAGAGAAAGAGAAAAGAGGGAGAGAGAAAGAAAAAGAAAAGAAAGAAAGAAGGGAGGGA----------GGGAGGGAAAGAAGGAAGGAAGGAAGGG chr4 + 94230402 61683535 61683534 61683633 61683535 61683534 61683633 99 GAAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAAAAG ....:..:....:..x.:.::.::x.x.:..:.:........x......:.......x...----------:...:.:x.xx.....:x.:..:..::. 61M10I28M 60/89 67.4% 99/94230402 0.0% 10/89 11.2% -9017155 -85213247 +3400 chr4 + 190214555 52666380 52666379 52666473 94 GAAAGAGAAAGAGA-AAAGAGGGAGAGAGAAAGAAAAAGAAAAGAAAGAAAGAAGGGAGGGAGGGAGGGAAAGAAGGAAGGAAGGAAGGGGAAGG chr4 + 94230402 51148380 51148379 51148474 51148380 51148379 51148474 95 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGG ......::...xx.-.:....:..............x....:xxx.::.xx...:x.:::x.x......x:...:::..::......::...:.. 14M1I80M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% 1518000 NA +3230 chr4 + 190214555 52673356 52673355 52673427 72 GCACCTATAATCCCAGCTACTTGGAAGGCTGAAGCAGGAGAATCTCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:..:.:...........:........:x.xx.x...x.x........::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -23359850 -70870552 +3475 chr4 + 190214555 52689545 52689544 52689627 83 CATGGTGGCACATGCCTGTAATCACAGCTACTTGGGAGGTTGAGGCAAGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:x..........::...:....x.xx.x...x...........:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -23343652 -70886750 +3349 chr4 + 190214555 52690261 52690260 52690470 210 TGAACCCAGAAGGCGG-AGGTTACAGTAAGCCGAGATCACGCCACTGCACTGCAGCCTGGGTGACAGAGCGAGATTCAGTCTCAAAAACAAACAAAAAAAAACAAAAAAAGGGGGAGAAATATTAAGGAGAAAGAGAGAGAGAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAGGAGAAAAGAAAAGGCAATTTGGAATTCAGGCACA chr4 + 94230402 74078522 74078521 74078720 74078522 74078521 74078720 199 TGCAACCAGCAGGCAGCAAAGAAGATTATGCCAAAGGCACAGTAGGGCTCCAAAGGTAGAGCCACACAGAGAGGC-------CAAAACTAAACAAAAATG--TTATAAAAGGAAAAGAAATATATAAGGCAAAGAAGGAAAAAAAGAATGTTAGAATGTTGCAGTTTAAACAGAAAAGAGGAAAGGAAAGGAAA---GAAGATCAAGAACA ..x.x....x....:.-.::xx.x.x..x...:.::x...:x:.xx..x.::x..x:x.:.:x...x..x...::-------.....x:.........x:--:x.x......:::........xx.:.:x.....::..:.:.:.:..x:xx....x:xx:x..xxx...x.....:...:....:.....x..---.:.:x...:.x... 16M1I58M7D18M2D92M3D14M 120/198 60.6% 199/94230402 0.0% 13/198 6.6% -21388261 -72842141 +3798 chr4 + 190214555 52692900 52692899 52692996 97 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ........:.--....:.:...........::........x.xx.x...x:..........:.:..x:xx:..:..:..------..x..x...... 10M2D67M6D12M 67/89 75.3% 89/94230402 0.0% 8/89 9.0% -23340301 -70890101 +3347 chr4 + 190214555 52696268 52696267 52696329 62 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATTGCTTGAACCTGGGAAC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...::.x....:.:...........::........x..x.x...x::........::.:.:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -23336936 -70893466 +3033 chr4 + 190214555 52697147 52697146 52697191 45 AAACAAAACAAAACAAACAAACAAACAAAAACACCTAGGAATACA chr4 + 94230402 74573317 74573316 74573361 74573317 74573316 74573361 45 AAACAAAAGAAAACAAACAAACAAACAAAAATCCCTAACAATGTA ........x......................:x....:x...::. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -21876170 -72354232 +3986 chr4 + 190214555 52701756 52701755 52701825 70 CGTGGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::..........--....:.:...........::........x.xx.x...x.:.............. 14M2D54M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% -23331441 -70898961 +3371 chr4 + 190214555 52708209 52708208 52708319 111 TACCACTGACATTGTAGTAACCATATTTTCACACACACACACACACACACACACACAAACTATACTTGTACATGTATATACATAGAATACTATACATATATACATACTATA chr4 + 94230402 18818811 18818810 18818919 18818811 18818810 18818919 109 TGCCAATCACATTT--GTACCTATATTAGAATTCACACACACACACACACACCTATTAAAAATACTCTTGCTTATTTGTGAACAGAATGGCTTACTCATCTACATATTGCA .:...x.x.....x--...x.:.....xxx.:x...................x:.:x..xx.....:x.:.x.:.x.:.:x.:.....:x:x...x:..x......:.::. 14M2D95M 72/109 66.1% 109/94230402 0.0% 2/109 1.8% 33889398 NA +3657 chr4 + 190214555 52710121 52710120 52710229 109 GGGAGAGGGAGAGAGACGAGAGAGAGAGCAAGAAAGAGAGAGAGAGAGAAAAGAAAAGGAAGGAAGGGAGGGAGGGAGGGAAAGAAAAGAAAGAAAGAAAAGAAAGAAA chr4 + 94230402 7358270 7358269 7358373 7358270 7358269 7358373 104 GAGAAAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGAC-----CTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAA .:..:.:.:::..:...xx.............:.::::.........:...x.:.:....x-----xx...:...:xx:...xx.:..x:x...x....:..:...:.. 61M5D43M 68/104 65.4% 104/94230402 0.0% 5/104 4.8% 45351851 NA +3030 chr4 + 190214555 52710177 52710176 52710224 48 AGGAAGGAAGGGAGGGAGGGAGGGAAAGAAAAGAAAGAAAGAAAAGAA chr4 + 94230402 44840876 44840875 44840923 44840876 44840875 44840923 48 AGAAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAAAAAAA ..:..:.::...:...:....:.....:....:....:..:....:.. 48M 36/48 75.0% 48/94230402 0.0% 0/48 0.0% 7869301 NA +3846 chr4 + 190214555 52719143 52719142 52719217 75 ACAGT-GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250986 33250985 33251061 33250986 33250985 33251061 76 ACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .....-.x..x.x.x.x.............:.....:.:........x.x.....x...x.....x..x....... 5M1I70M 61/75 81.3% 76/94230402 0.0% 1/75 1.3% 19468157 NA +3054 chr4 + 190214555 52719151 52719150 52719211 61 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::..........:.:.............x:x.x..::.x.....:.x....:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 29196387 NA +3725 chr4 + 190214555 52719152 52719151 52719219 68 GTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250994 33250993 33251061 33250994 33250993 33251061 68 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..x.x.x.x...................:.:........xxx.....x...x.....x..x....... 68M 55/68 80.9% 68/94230402 0.0% 0/68 0.0% 19468158 NA +3390 chr4 + 190214555 52719153 52719152 52719213 61 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::..........:...............x:x....::.x.....:.x....:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 29196389 NA +3595 chr4 + 190214555 52719155 52719154 52719215 61 TGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::..........................x::....::.x.....:.x....:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 29196391 NA +3678 chr4 + 190214555 52719157 52719156 52719217 61 TGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::........:..................::....::.x.....:.x....:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 29196393 NA +3362 chr4 + 190214555 52719159 52719158 52719222 64 TGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 23522764 23522763 23522827 23522764 23522763 23522827 64 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCAA ..x.x..::......:.:...............x..::....::.x.....:.x....:..::. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 29196395 NA +3114 chr4 + 190214555 52733408 52733407 52733490 83 GTTTTCTATATACT-----ATATATATGTGTGTATATATTTATACACATATATACATATATACACATATGTATACATATATACATATA chr4 + 94230402 85834527 85834526 85834614 85834527 85834526 85834614 88 GTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....:...x:.:.-----x.:.:.:.......:.:....x..::.x::...:.:..:..x.:....:.x...:..:.:.....:.:. 14M5I69M 55/83 66.3% 88/94230402 0.0% 5/83 6.0% -33101119 -61129283 +3035 chr4 + 190214555 52733444 52733443 52733517 74 ATACACATATATACATATATACACATATGTATACATATATACATATACACATATGTATACATATACAATATGTA chr4 + 94230402 46063299 46063298 46063372 46063299 46063298 46063372 74 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCA .....::.:..:.::.:...:x:..:....x:.::...:.x:.......:.....xxx.:........x:..:. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 6670145 NA +3448 chr4 + 190214555 52733480 52733479 52733559 80 ATATACATATACACATATGTATACATATACAATATGTATACATATATACACATATGTATACATATACACACATATGTATA chr4 + 94230402 32744950 32744949 32745029 32744950 32744949 32745029 80 ATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATA ..:....:x..:x:..x.:..:.:x..:.x.....:x.......:.......:.x..:.:...:.::::.::........ 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 19988530 NA +3338 chr4 + 190214555 52733530 52733529 52733619 90 CATATGTATACATATACACACATATGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACACATGTATA chr4 + 94230402 23247721 23247720 23247805 23247721 23247720 23247805 85 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-----TACATGAATAAATATATATA ...:...:..:::.:.....:x....x.:.:..:..........:.:.......x.x.x.x.x:.-----:.....x.:.x.:..:.... 65M5D20M 59/85 69.4% 85/94230402 0.0% 5/85 5.9% 29485809 NA +3020 chr4 + 190214555 52733568 52733567 52733622 55 CACATATATACACACATGTATACATATGTACACACATGTACACACATGTATACAT chr4 + 94230402 51034727 51034726 51034781 51034727 51034726 51034781 55 CACTTACATACACATTTGTATTCATATGTACACACTCTTGCACACAGGTGTGCGT ...x..:.......:x.....x.............x:x.:......x..:.:.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 1698841 NA +3079 chr4 + 190214555 52733602 52733601 52733679 78 CATGTACACACATGTATACATATGTACACACATGTATACATATATGTATACACACGCATATATACATATATACACACA chr4 + 94230402 22600191 22600190 22600268 22600191 22600190 22600268 78 CAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ..x.x.x.....::...x..:...:.x.......:.....x.x..:.:..:.:x:.::.:.:..:..::..:...::. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 30133411 NA +3181 chr4 + 190214555 52734436 52734435 52734516 81 TTTCTTTTCTTTTCTTTTCCTTTCTCTCTCTCTCTCTCAACCAGTTGTTTCTTTTCTTTTTTCTTTTCTTTTCTTTTCTTT chr4 + 94230402 16303852 16303851 16303932 16303852 16303851 16303932 81 TTCTCTCTCTTCTCTCTCCTTTTTTTCAGCTCCCAGTCAACCGCTTGTTTCATTTCCCAGCTCTTTGCTCTTCTCCTCTCT ..:::.:....:...:.:.:...:.::xx...:.xx......:x.......x....::xx:.....x..:....::...:. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 36430584 NA +3133 chr4 + 190214555 52734460 52734459 52734565 106 TCTCTCTCTCTCTCAACCAGTTGTTTCTTTTCTTTTTTCTTTTCTTTTCTTTT------CTTTTCTTTTCTTTTCTTTTCTTT----TCTTTTCTTTTCTTTTCTTTTCCTCTCTC chr4 + 94230402 21704059 21704058 21704174 21704059 21704058 21704174 116 TCTCTCTTCTTTTTTGCAGCTAGTTCCTCTTCTTTTTTCTTTCTGATTCTTTCAGACTGTTTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTTC .......:::.:.:x:.x:x.x...:..:.............::xx......:------:.....:.x...x:::.x:...:.----.x..:.x....:..:.....:.x.:.:.. 53M6I24M4I29M 69/106 65.1% 116/94230402 0.0% 10/106 9.4% 31030401 NA +3313 chr4 + 190214555 52734475 52734474 52734596 122 ACCAGTTGTTTCTTTTCT--------TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT--TCTTTTCTTTTCTTTTCTTTTCTTTTCCTCTCTCTCTCTCTCTCTCCCT-CCCTCCCTCCCTCTCT chr4 + 94230402 89201191 89201190 89201316 89201191 89201190 89201316 126 ACTGGCTGTTACCTTTCCAGCAGCTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTG-------TTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCT ..::.:....x.:....:--------.:x.x.....xx:.x:..........:...:...:....--x..x.x........x-------..xx........:..:.:.:.:.:.x.-....:...:...x... 18M8I39M2I15M7D27M1I16M 82/115 71.3% 126/94230402 0.0% 18/115 15.7% -36466716 -57763686 +3100 chr4 + 190214555 52734488 52734487 52734601 114 TTTCTTTTTTCTTTTCTT--------TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCTCTTTCTT chr4 + 94230402 49829809 49829808 49829928 49829809 49829808 49829928 120 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTT--CCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT .....:.:.xx....::.--------...:x..:.:.x:xx:.:x...:.x::.x.......::....:.:......--.::......:.:.:.:.......x.x.x.x.x..:.x...:.. 18M8I51M2D43M 72/112 64.3% 120/94230402 0.0% 10/112 8.9% 2904679 NA +3321 chr4 + 190214555 52734519 52734518 52734619 101 TTTTCTTTTCTTTTCTTTTCTTTT---CTTTTCTTTTCTTTTCCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCTC---TTTCTTTCTTTCGAGATGGTCTCA chr4 + 94230402 49829835 49829834 49829941 49829835 49829834 49829941 107 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGGGCACA ..::x......x.xx:..x:....---.x.......::....::::...:..::......:...:.........x.x.x.---:..:x..:...x...x...x.x.. 24M3I53M3I24M 69/101 68.3% 107/94230402 0.0% 6/101 5.9% 2904684 NA +3265 chr4 + 190214555 52736051 52736050 52736164 114 TATATATATATACACATATATATACACATATATACACATGTATATACATACACACATATATACACATATACACATATATA-----CACATATATACACATGTATATACATACACACATA chr4 + 94230402 58675362 58675361 58675480 58675362 58675361 58675480 119 TGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAATTGTAAAGACAGAAAGACATA .:.x.:...x.:x..x.:x..x.x:...:..x.x:::...:.....:......x.....:.:....:.:..x..x.....-----.x:...:x..x.xx....x.x...x.x.x..... 80M5I34M 75/114 65.8% 119/94230402 0.0% 5/114 4.4% -5939311 -88291091 +3049 chr4 + 190214555 52736159 52736158 52736249 91 CACATATATACACATATACACGTATATACACATATATACACGTATATATACACATATATACACACATATATACACATATATACACATATGT chr4 + 94230402 22600181 22600180 22600271 22600181 22600180 22600271 91 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT ....x.x..x..x:x.x....::....x.....::.x....:.::...:.x.x....:..:.:x::.:.:.::.:..::..:...:..x.. 91M 56/91 61.5% 91/94230402 0.0% 0/91 0.0% 30135978 NA +3253 chr4 + 190214555 52736173 52736172 52736280 108 TATACACGTATATACACATATATACACGTATATATACACATATATACACACATATATACACATATATACACATATGTATACACATACATATACACACATATATACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:..:.:.x:x::.:x::::.:x.....:...x..:......x.:::..:x..:..:...:...x...::x.x.::::...::.:..::x.:..::..:.... 108M 61/108 56.5% 108/94230402 0.0% 0/108 0.0% 31626979 NA +3071 chr4 + 190214555 52736185 52736184 52736293 109 TACACATATATACACGTATATATACACATATATACACACATATATACACATATATACACATATGTATACACATACATATACACACATATATACACATATATATACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:.:x::::.:x.....::..x..:......x.:.:..:x:.:.::.:.:...x...:.x.x.::::.:..:.:..::x....::..:..... 109M 60/109 55.0% 109/94230402 0.0% 0/109 0.0% 31626991 NA +3543 chr4 + 190214555 52736241 52736240 52736323 83 CACATATGTATACACATACATATACACACATATATACACATATATATACACACATATATATA---CACACACACACATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..::.:.....:....:....x..::x......:......:...:.:.......x:x.x.x.---:...::x.:.x.......... 62M3I21M 59/83 71.1% 86/94230402 0.0% 3/83 3.6% 29488520 NA +3367 chr4 + 190214555 52736247 52736246 52736339 93 TGTATACACATACATATACACACATATATACACATATATATACACACATATATATACACACACACACATATATATATAGTGTGTTTTTTAGAT chr4 + 94230402 54963193 54963192 54963279 54963193 54963192 54963279 87 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCAC------GTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACAT ......:x......x..:.....x..........:.:.:.xx...------:.:::.x..:........x....::x.:.x:x..:....x.. 45M6D42M 61/87 70.1% 87/94230402 0.0% 6/87 6.9% -2226946 -92003456 +3864 chr4 + 190214555 52741084 52741083 52741171 88 AAAGAGAGAGAGA-----AAGAAAGA-------AAGTAAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGGAAAGGAAAGGAAAGAAAGAAAGAAAG chr4 + 94230402 15855381 15855380 15855480 15855381 15855380 15855480 100 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ...........::-----........-------....x.:.::.:.:.xxx.............::..::.:.:......x.........x....:.::. 13M5I8M7I67M 66/88 75.0% 100/94230402 0.0% 12/88 13.6% 36885703 NA +3199 chr4 + 190214555 52741094 52741093 52741166 73 AGAAAGAAAGAAAGTAAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGGAAAGGAAAGGAAAGAAAGAAA chr4 + 94230402 71601026 71601025 71601098 71601026 71601025 71601098 73 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAA ..:....:..:...x...x......x:..x..:x:.:.....:x:.:x.x.:.x.x.....:........... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -18859932 -75370470 +3009 chr4 + 190214555 52741144 52741143 52741198 55 GGAAAGGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 24202362 24202361 24202416 24202362 24202361 24202416 55 GGAAAGGAAAGGGAAGAAGGGAAGAACACCAACACCAAAGAAAAAAAGAAAAAAA ............:.....:.:.....x:xx.:x.xx.......:.......:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 28538782 NA +3232 chr4 + 190214555 52741363 52741362 52741423 61 GTTTTTATTACCTTCTTTTGTGTGTGTGTGTGTGTGTGTTTTGTGCTTTTTGGGGTTTTTT chr4 + 94230402 23734031 23734030 23734091 23734031 23734030 23734091 61 GTTGTTGTTTATTTGTTTTTTTTGTTTGTGTGTGTGTGTTTTGTGTTGTGTGTGGTTTTTT ...x..:..xx:..x....x.x...x...................:.x.x..x........ 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 29007332 NA +3264 chr4 + 190214555 52747089 52747088 52747158 70 CATGGTGGTGTGCGCCTGTGGTCCCAGCTACTCGGGAGACTGAGGGAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......::..--...:..:.........:.::..:.....xxxx.x...x.:...........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -23286108 -70944294 +3194 chr4 + 190214555 52795496 52795495 52795589 94 GGAAGGAAGGAAGGAAGAAGAAGAAGAAGGAAGGAAGGGAGGGAAAAGAAAGAAAGTGAAGAAAGAAAGAAAAAAGGAAGGAAGGAAGGAAGAA chr4 + 94230402 58935721 58935720 58935814 58935721 58935720 58935814 94 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ....x..::::.::.x::x..xx...:.::..x....:.:::.:...:x........:...:.....::..x..x.x....:.::...::::.. 94M 56/94 59.6% 94/94230402 0.0% 0/94 0.0% -6140225 -88090177 +3209 chr4 + 190214555 52795568 52795567 52795668 101 AAAGGAAGGAAGGAAGGAAGAAAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAGTCAGC chr4 + 94230402 51148379 51148378 51148479 51148379 51148378 51148479 101 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGC .:.:::.:....xx.x::...:...............x...::xxx...:xx:...x.:..x.x:..::.x:...:.:...:..:...::::..:.x.... 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% 1647189 NA +3409 chr4 + 190214555 52795704 52795703 52795840 137 TCTAGGAGAAGCTGAAGCAGGAGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAG chr4 + 94230402 24042723 24042722 24042854 24042723 24042722 24042854 132 TCTAAGGAAACATTAGGCAACAGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAA-----AGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAAGCAG ....:.::..xx.x.:...:x..x....:x...:..:x::.::x..x..:.:.:...-----..:x......x..:....:.x.:.x...x.:.:.xx.x.x...x:x.x.....x...x.........x..::x.. 57M5D75M 83/132 62.9% 132/94230402 0.0% 5/132 3.8% 28752981 NA +3729 chr4 + 190214555 52795710 52795709 52795873 164 AGAAGCTGAAGCAGGAGAAGGAAGGAAGGAAGGG------AGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAGGAGAGGAGAG chr4 + 94230402 49044652 49044651 49044814 49044652 49044651 49044814 163 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGA------GTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATG-AAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .:...x.x..:x..:.:.:::x.:..::xx....------.......x.::x..x:....:x.xx...x:.::..:.:....------:xx......::......:.x:..:..x........:.......x.-...x.::...xx..:.xx.:.......::.::x... 34M6I42M6D45M1D36M 99/157 63.1% 163/94230402 0.0% 13/157 8.3% 3751058 NA +3491 chr4 + 190214555 52795722 52795721 52795851 130 AGGAGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGA--AAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGA chr4 + 94230402 49044682 49044681 49044813 49044682 49044681 49044813 132 AGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ...:.x:.xx..:...:x.:.x..x:....:x.xx:.:x..:.:..::.::.:xx.........x:...::x....:.x.............::.--...x.::...xx:.::xx..:....::.....x.. 95M2I35M 79/130 60.8% 132/94230402 0.0% 2/130 1.5% 3751040 NA +3029 chr4 + 190214555 52795723 52795722 52795782 60 GGAGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAA chr4 + 94230402 29014678 29014677 29014737 29014678 29014677 29014737 60 GAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA .:..:..xx.x:.......:.:.:.::::.....:...:..............:.x:... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 23781045 NA +3001 chr4 + 190214555 52795732 52795731 52795835 104 AGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAA chr4 + 94230402 35137207 35137206 35137310 35137207 35137206 35137310 104 AGGAAGAAAAGGAGAAAGGATCAGAAAGCAAAACTGAAGTCTCAAGATGGCTGAAAAATAGAGTAAGAACAAACAAAAAAAAAGAACAATGCAGATGAAATAAA ......:..:........:.xx.:.:.:x:...xx...:xxxx.::.x.:xx..x...x.:..x.....x...x....:.......x:.x:x.:.x....x... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% 17658525 NA +3163 chr4 + 190214555 52795814 52795813 52795897 84 AGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAGGAGAGGAGAGGAGAGAATAGAAGAGAAAGAGAAA chr4 + 94230402 75241507 75241506 75241589 75241507 75241506 75241589 83 AGACAGGAA-ATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAA ...x..:..-.x.....xx.x...x............:.........:.::.x....xx:....:.::.:..x.x..:.::x.. 9M1D74M 58/83 69.9% 83/94230402 0.0% 1/83 1.2% -22445693 -71784709 +3400 chr4 + 190214555 52809470 52809469 52809529 60 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x....:.:...........::........x.:x.x...x::...........:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -23223735 -71006667 +3392 chr4 + 190214555 52833330 52833329 52833400 71 CATGGTGGCAGGCGCCTCTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACCTGAATCCAGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::....:--..:.x.x....:...........::........x.xx.x...x...:....:.....:.. 9M2D60M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -23199867 -71030535 +3100 chr4 + 190214555 52833456 52833455 52833532 77 TGAAACTCTGTCTCAAAAAACAAAAACAAAAACAAGAACAAAACAAACAAACAAACACCCTAAAA-ACTAAATCAGCT chr4 + 94230402 27697271 27697270 27697348 27697271 27697270 27697348 78 TGAATTTATGTTCTATAGAACATAAACAAAACTGAGCACAAAACAAACACACAAACAAACAAAAACCCTAAGTAAGTT ....x:.x...:::.x.:....x........x::..x............x.......xx.x....-x....:.x..:. 65M1I12M 56/77 72.7% 78/94230402 0.0% 1/77 1.3% 25136185 NA +3006 chr4 + 190214555 52851418 52851417 52851481 64 CATCAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAGAGAAAGAAAACCGTATCT chr4 + 94230402 17691363 17691362 17691426 17691363 17691362 17691426 64 CATCAAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAAAAGCTCATTT ......................::.x.x...x...x.:::.:.....x.xx.....x.x:..:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 35160055 NA +3469 chr4 + 190214555 52862103 52862102 52862639 537 GCGCCGCCTCGGACCACCCGCTGCTCCCCTCCGCCCGCTGCCTCTTCTCCCCGCGCCTCACGGGGCTCCGCACTGACTCCAGGCGCC-TCCGGGGGCGTCGCGCGCGCGGAGCGGCGCCGGGGGCGGGGCCTCGTGTAGGGCGCCCCGGGATTGGCTGTGGGGAGAGGGGGCGGGGCCG-----GCCGCGGAGAAAAC-AGCCGGCGCGCCGCGCGAGTGCAGTCTGGGTCTGGAGCCTGAGCCCTGCGGAACC----TCG--GCGCTCGGCCCCACCCCGCCCGTACCTGCACTTATTTATTGTTGTTATTTCTTACCGCGGAGCCCCGCAGTCGGGTCCTCCCGCCC--GCTCCCGCGCAGC-GCTAGCATTC-TCCAGTCCCTCAGTCCCTTCCCGCGCGGTGCGCCGCAGCCGAGGCGATGCGC--CTCATTCAGAACA----TGTGCACCATCGCCGAGTACCCCGCGCCGGGCAACGCCGCGGCCTCCGACTGCTGTGTGGGCGCCGCCGGCCGCCGCCTGGTCAAGATCGCCGTGGTGGGCGCCAGCGGCGTG chr4 + 94230402 35786397 35786396 35786898 35786397 35786396 35786898 502 GCAGCGCCACAGCCCACCCGCTGCCCCTCTCCGCCCTCCTCCATCCCTCATCACACGTCAGAGGTTTCCCCGCGGCTGCGGGGCGACGTCC---GCCCTCCCG-GCTCGGGGCCGTTCTACACCCAACGCCTCTCGTTCGGAGCCTCGATGCGGGCAGCGCCGGGCGGGCCCGCGGCAGCGAGCGTCGAGGGACAAACGAGCCCAC-CTCCTCCCGCCCGCAGC-----------GCCAGGCCCTCGCACAGCCATTTTCGTCACGCGTGGCCCCAGCGCCAGCCTCCCCGCGCCGA------GCCGTCTCTCCCCGCCTCACCTTCTCGCAGAGG----CTGCGGACCTGGCTCTCGCTCAGCTGCCGGCACTCGTTCAGCTGCTCGATCCACT-------GGT---CCAGCTCCTTGGCGAAGCTCTTCTCCTCCATggcggcgctgccggccggggccgggccccccgcactgggcgcccgcgaggcc-------------cgggc-ccgccTGAGGCTGGCGGCTCAA--------CGGCGGGGGCGCGCGGCCTG ..:x....x.:.x...........:..:........x.:x..x:::...x:.:.:.x...x:..x:...x.:.x.x:x.x:....x.-...---.x.x..x..-..x...:..x.:x.::x:xx.::x.....x:..xx..x...:..:x::x...x.:.xx.:.x...xx..x...x.-----.:..x..::x....-....x:.-.x..x.x..xx:....:-----------...x.:x..::..:x.:..----...--:...x:.......x.x.xxx.x.x..:..:.:x.------.::..:x:.:.:::..x.:xxx:.:.....xx.----..x.x.x..--....:...x....-..::...:..-.:...::x...::...x:.-------...---..:xxx..xx.....x..x.--...x.:..x::.:----..:xx:..:xx....:.:x......:.:....:x.xx..x....-------------:....-.....x.xx..:.x.x.x....--------:..:...x..xx.....x.. 87M1I3M3D9M1D75M5I14M1I7M1D17M11D19M4I3M2I34M6D33M4D9M2I13M1I10M1I19M7D3M3D20M2I13M4I44M13D5M1D22M8D20M 294/479 61.4% 502/94230402 0.0% 81/479 16.9% 17075706 NA +3288 chr4 + 190214555 52876610 52876609 52876692 83 CGTGGCGGTGCATGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCTGGAGGTGGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.:......:.--..:...:...........::........x.xx.x...xx:.........x.:..x.xx::.:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -23156587 -71073815 +3218 chr4 + 190214555 52893163 52893162 52893256 94 TAGTTCAACCCTCTGAATCTTGCTTTTTCTTCTCTCCTCTCCTCTCCCTTTCTTTCTTTTC----TTTCCCTTCTTTCTCTCTCTCTCTCTCTTTCTT chr4 + 94230402 53764520 53764519 53764614 53764520 53764519 53764614 95 TAGTTTAGT--TTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCT-TTTCTCATTCTT .....:.::--.:::..::..........::.......:......::.::..::..:x:x.----..:.....x:......x:..-.:....x..... 9M2D50M4I20M1D12M 63/91 69.2% 95/94230402 0.0% 7/91 7.7% -871357 -93359045 +3659 chr4 + 190214555 52916434 52916433 52916516 83 CATGATGGCGCGCGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...:..:..--......:.......:...::........x.x..x...x.:........::.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -23116763 -71113639 +3596 chr4 + 190214555 52925022 52925021 52925135 114 TCTAAGAAGTTTATACATAATAGCTCATTTAATCTCCACAGACACCTAATGTGCTAGGTAC-TATTATCATTCTCATTTTGCAGATGGAGAAACTGAGCCACAGAGAAGTTAAGT chr4 + 94230402 28016136 28016135 28016249 28016136 28016135 28016249 114 TCAAAGTGGATTATAAAGAATAGTGATTTAAACCTTCCTGCACCTCTAG-GAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ..x...x:.x.....x.x.....:xxx..x..:..:.x::x..x:...:-.x.x......x-:.x...:....:......:............::.x.x:.......:.:.x... 49M1D11M1I53M 77/113 68.1% 114/94230402 0.0% 2/113 1.8% 24908886 NA +3038 chr4 + 190214555 52935814 52935813 52935857 44 TATCTATCTCATCCTTTTCTTTTTCTTTTCTTTTATTTTTTGAG chr4 + 94230402 37944959 37944958 37945002 37944959 37944958 37945002 44 TATCTTTCTCATCCTTTTTTTTTTCTTTTCTTTTTTTCCTCAAG .....x............:...............x..::.::.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 14990855 NA +3364 chr4 + 190214555 52947913 52947912 52947989 77 AAATCAATAAGAAAATCAATTGGAAAAATACAAACAACCAAGTAGAAAAATAGGCCAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 24123049 24123048 24123125 24123049 24123048 24123125 77 AAAAAAATGAGAAGAAACAGCAGAAAATAACAAATAACAAAATACAAAGTTTGGCTAACAAAAAAAAAAAAAAAAAA ...xx...:....:.xxx.x::.....xx.....:...x..:..x...:x.x...:..x.................. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 28824864 NA +3186 chr4 + 190214555 52947927 52947926 52948038 112 ATCAATTGGAAAAATACAAACAACCAAGTAGAAAAATAGGCCAAAAAAAAAAAAAAAAAAAAAGCAGGCAAATCCTAGAAGAAATCATGTGAATCACAAAAAATCACGTACA chr4 + 94230402 65168925 65168924 65169036 65168925 65168924 65169036 112 ATAGAATGAGAGAGTACAAAAGGCCAAAGGTTGTGGTGATTTAAAAGGAAAAAAAAAAAAAAAAAAGGCAAATCTAAGACCAAGACACGAGACTAGCAGAAAGGAACAAACA ..x:.x..::.:.:......x::....:x:xx:x::.::x::....::...............:x.........:x...xx..:x..:.x..x.x:..:...:xx..:x... 112M 67/112 59.8% 112/94230402 0.0% 0/112 0.0% -12220998 -82009404 +3175 chr4 + 190214555 53007280 53007279 53007410 131 AGGAGAGAGAGGGAGAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAAAAGAAAGAGAGAAAGAAGGAAAGGA-----AGGAAAGAAGGAAGGAAGGAAGGAAGGGAGG chr4 + 94230402 51148386 51148385 51148516 51148386 51148385 51148516 131 AGAAGCTACAGAGAGAGAG----AGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAG-GAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ..:..xx.x..:.......----..:..:...:.x...::xxx...:xx::.:x..:.x.x:...:.x.........:....-..:..:..:...x..x.-----.:.x.x.........:..x:x.xx:...... 19M4D59M1D17M5I31M 83/126 65.9% 131/94230402 0.0% 10/126 7.9% 1858894 NA +3826 chr4 + 190214555 53012330 53012329 53012423 94 ATTAGCATAAAATCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAAAAGGCAGGGAAGTGGAGGCAGAGG chr4 + 94230402 75248031 75248030 75248117 75248031 75248030 75248117 87 ATTATCACAAAATAAATCCTTC-------CTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaag ....x..:.....xxx..::..-------....................................x.x.:.::.x::.::..x.:.::x.:.:. 22M7D65M 63/87 72.4% 87/94230402 0.0% 7/87 8.0% -22235701 -71994701 +3530 chr4 + 190214555 53012355 53012354 53012411 57 TTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAAAAGGCAGGGAAG chr4 + 94230402 75248047 75248046 75248103 75248047 75248046 75248103 57 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagag .:..::.................x..................x.:.::.x::.::.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -22235692 -71994710 +3102 chr4 + 190214555 53012357 53012356 53012392 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40411053 NA +3311 chr4 + 190214555 53012359 53012358 53012421 63 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACAAAAGGCAGGGAAGTGGAGGCAGA chr4 + 94230402 75248049 75248048 75248111 75248049 75248048 75248111 63 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaa ..::...............x.x..................:.::.x::.::..x.:::.x.:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -22235690 -71994712 +3316 chr4 + 190214555 53012359 53012358 53012394 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 40411055 NA +3102 chr4 + 190214555 53012361 53012360 53012396 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40411057 NA +3125 chr4 + 190214555 53012363 53012362 53012404 42 CTCTCTCTCTCTCTCACACACACACACACACACACAAAAGGC chr4 + 94230402 12601304 12601303 12601345 12601304 12601303 12601345 42 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGC ...............x.x.......:............:x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 40411059 NA +3342 chr4 + 190214555 53016968 53016967 53017050 83 CGTGGTGGTGCACACCTATAATCGCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--.:..:.:x..........::........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -23016229 -71214173 +3606 chr4 + 190214555 53027689 53027688 53027770 82 GTGGTGGCACCCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGGCTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.::........x:xx.x.:.x.:.....:.....:..x:.x:.....:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% -23005512 -71224890 +6626 chr4 + 190214555 53044491 53044490 53044665 175 TTCCTTCCTTCCTTCCTTCCTTCCTTCC---TCCCTCCCTCTCTCCCTTTCTCCTTCTATATACTTTACAGGATTCCTTTCCCTTTCCCCTTCCCATTCCCCTTCTCTTTCTCCTTCCTTCCTCCCTCCCTTCTTCCCT--CCCTCCCTCCTTTTTTCCTTTTTCCTCCTCCTCCTCCTT chr4 + 94230402 1114907 1114906 1115085 1114907 1114906 1115085 179 ttcctttccctcttcctttctcgcttcccatttcccttctcttcccttTTCTCTTACTATGTTCGCTGGCCCTTTTCCTTCCCTTTCCCTTTCCAATTTCCCTTCAACATCTCCTTACAT-CTCCTTCCTTTTTCCCCTTACCATTTCTcctccctttctcattcccttccctctccctt ......:.:::.......:..:x.....---.:..:::....::..:......:.x....:.x.x:.:xxxxx..:.:...........:....x...:......xx:x.......x.x.-....:...:..:.:....--..x.::.....:::..:..:x....::::....::.... 28M3I89M1D18M2I39M 118/174 67.8% 179/94230402 0.0% 6/174 3.4% 51929584 NA +3842 chr4 + 190214555 53048220 53048219 53048281 62 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCATGAGAACCACTTGAACCTGGAGGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...::.x......:...........::........x.x..x...x..........::..:.. 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% -22984984 -71245418 +3443 chr4 + 190214555 53053090 53053089 53053185 96 TGGCACACGCTTGTAATCCCAGCTACTTGGGAGGTTGAGGCGGGAGGATCATTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033202 76033201 76033289 76033202 76033201 76033289 88 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::....--....:.:...........::...:....x.xx.x.:.x..:..........:..x:xx:..:..:..------..x..x...... 9M2D67M6D12M 64/88 72.7% 88/94230402 0.0% 8/88 9.1% -22980112 -71250290 +12947 chr4 + 190214555 53076234 53076233 53076614 381 TTCTAAAGAAATCTTTTATATACAAAAACATTCAGTTATTTTCTTT-TGGCTAAAAAAA-----------TTCCAATTTTATAAAGTAGGTGTTCTCTACAGCATCAAGGTTGATGAAAACCATACCCTTGAACAGGAAGTTCAAAAGACAGAA--TGGCAGGCAAGAGCGGACCCATCTGCTATGGAAACATGTTACCATCCTGCAAGGCCCAGAACCCCTGACAAGAGCACACCATTATTTATGAAAAGCCTCTGCTCCCTGGCTCTT-GTCAGACTCATTCC--CAAGCCACTCCGGGGCTAAGCAAATGCGCTGATATCTAGT-TGGCCTTGTGTCCTCGTAACTGTCAGGAGCAGAGGTGTTGGTG-------------AAATATTAAGAGGAAAATGAGGTGGACG chr4 + 94230402 67745386 67745385 67745789 67745386 67745385 67745789 404 TTCAAAGGCATTCTTTCA-------AAGTATTCATCTATTTTCTTTCTGGTTTGAAAAAAGAAGGACATACTTCAGCTTTTTGAGGTAGGTGTTCTCTGCAGAATCCGCACTGATGAGAACCATGCACA-GAACAGGAAGTTGAAAAGACAGAAAATGGCAGCTGAGAGCAGCTCCATCTGCTCTGGAAGCGCATTACTGTACGGCGGAGGCCAAAACAACTGACAAGACCGAGTCATTATTTATGGAAGGACTCTGAACTCTGGCCGTTCGTCAGGCTGACTCAAGTAGTCTGCTGCTGGACCTGATGAGCTAGCGAGTATCTAACATAGATTTGTGCTCTAATAAATGTCAGATACAGAGGTGTTGCTGAAACAAATTGCTAAAATATTAAGAGAAAAAGGAACTGTACG ...x..:.x.x.....:.-------..::.....x:..........-...:.x:.....-----------:.:..::...x.:.:.............:...x...x:x::......:......:.x.x-............x...........--......x::.....:.x:.........x.....:.:::....::.x.x..:::.x...:...xx.........x.:x::...........:..:.x.....xx.:.....:x..-.....:..x.:..x--:.:x.::..x.x..:.:x::::.::xx..x::......::-.:.x:.....::..x:...x......:x:...........x..-------------............:....x..:x..x... 18M7D21M1I12M11I59M1D24M2I114M1I14M2I40M1I43M13I28M 263/373 70.5% 404/94230402 0.0% 39/373 10.5% -14669152 -79561250 +3161 chr4 + 190214555 53128036 53128035 53128089 54 AAGGGCCATGTCCTAAAAAAAAAAAAAAAAAAAAGCCAATAAAAAATCTAATAT chr4 + 94230402 62017717 62017716 62017770 62017717 62017716 62017770 54 AAAGGCAATGCTCTGAGAAAAAAAAAAAAAAAAAAGCAACAAAAAGTCAACTAT ..:...x...::..:.:.................:x...:.....:..x.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -8889681 -85340721 +7933 chr4 + 190214555 53132183 53132182 53132520 338 GCTTGTGATATATTTTAAATATGTATTAAACATCTTAAACTTCACTGATACAGTGTTTAGTAATATGTGCTATGGGTAACTATTTTAATATGTTGGATAGTAAAACTAAATATAACGGTTCCAACATTTCTCCTGGGAGTGATTT-TGGCAGACATATGTTCTTCGTCAGAGTTTCCAGCAGAAATCTTAGAAATC----AAGAGAAAAAATAGACCCTATTATACCAAACAACGTTGCAAACCACAATAGAAAACAAGTATTTAAAGCTGTTTTTTGTTTTCTTTTGTTTTGTTTTGGCAGCCCTGAAATAACAAATCTGAAACACTAGAAATGAAGATGTA chr4 + 94230402 67722113 67722112 67722440 67722113 67722112 67722440 328 GCATGCGTAATAACATAAAAATATGTTGGTGTTGTTGTGTTTGACAGA---ACTGTTAAATAATACATCTTGTGGCAGACTATCTTACTGCCTTGGGTAATAACACTGAATGTAACAGTTCCAAGATTTCTCATGGGTGCAATTTACCGCAGACATATGTTCTTCATCAGTGTTTCCAGCAG-AATGTTACAAATTGGAGGGGAAACAGAATAGACCAAAACATAATGGATAATGATGC--TTTTCAACAGAATGTTGGT-TTTAGGGGTGTTTTTGG--------GGAGTTTTATTGGCAGTCATTAAAAAAAAAGGAGGAAAAAAAAAGGAGTGAGTTGTA ..x..:.xx...x:x....x..:.:..::xxx.x..:x::..x..x..---.x....x.:.....::.x:.:...xx:.....:...x.::x....:..:...x...:...:....:.......x.......x....x.::....-:x.................:....x...........-...x...x....:----::..:.x.:........xx.x:...x:::.:..:.x...--x::x...:....x::x:..-....::.x.......x.--------x.xx..x.x.......:.x.x...x..x..:xxx....x.xx.:::.xx:..x.... 48M3D94M1I36M1D13M4I39M2D19M1D17M8D57M 213/323 65.9% 328/94230402 0.0% 20/323 6.2% -14589930 -79640472 +3912 chr4 + 190214555 53148870 53148869 53148952 83 CATGGTGGCATGTGCCTGTAGCCCCAGCTACTCAAGAGGCTAAGGCAGAAGGATCGCTTGAACCCAGAAGTTTGGGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x.....::.........::.:.....:..x.xx:x.:.x.:..............:..x......:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -22884327 -71346075 +3693 chr4 + 190214555 53150654 53150653 53150729 76 ACTAGCTGTATGACCTTGGGCAAATTATTTACCTTCTCCAAGTCTCAATTTCCTCATCTGTAAAATGGAAACAATA chr4 + 94230402 79037107 79037106 79037182 79037107 79037106 79037182 76 ACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATA ..x..............:..x..:......xx:..x..::...:......:.::..xx.:.......x::.x.... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -25886453 -68343949 +3077 chr4 + 190214555 53156569 53156568 53156627 59 GCACCTGTAGTCCCAGCTACTTGGGAGCCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::..x.....x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -22876637 -71353765 +3153 chr4 + 190214555 53214631 53214630 53214679 49 TGCTGCACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG ...........:....:......:.:x.xx.x..:.............. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 434169 NA +3164 chr4 + 190214555 53297458 53297457 53297495 38 CCTTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTGCTTT chr4 + 94230402 55690040 55690039 55690077 55690040 55690039 55690077 38 CCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTT .....:...............:............:... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -2392582 -91837820 +3012 chr4 + 190214555 53297460 53297459 53297495 36 TTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTGCTTT chr4 + 94230402 89314591 89314590 89314626 89314591 89314590 89314626 36 TTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTT ....x...........................:... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -36017131 -58213271 +3129 chr4 + 190214555 53308461 53308460 53308519 59 CATTTCTCACTCTTTCTCCTCCCATCCCTCTCTCTCTCTCTTTCTCTCTCTCTTATACA chr4 + 94230402 41536909 41536908 41536965 41536909 41536908 41536965 57 CATTTCTCCCTCTTGCTCCTCCCCTCCCCCCCACCCCCCCTT--TTTCTTTCCTATACA ........x.....x........x....:.:.x.:.:.:...--.:...:..:...... 42M2D15M 45/57 78.9% 57/94230402 0.0% 2/57 3.5% 11771552 NA +3508 chr4 + 190214555 53324290 53324289 53324359 70 CACATGTAGTCCTAGCTACTTAAAAGGCTGAAACAAGAGGATCGCTTGAGTCCAGGAATTTGAGGCTACA chr4 + 94230402 76033207 76033206 76033276 76033207 76033206 76033276 70 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...:......:.:........:.........:x.xx.x.:.x.:.....::....:.::..x:....::. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -22708917 -71521485 +3584 chr4 + 190214555 53358429 53358428 53358513 85 TGTAATTCCAGCTACTTGGGAGGCTGAGGCACAAGAATCATTTGAACCTGGAAGGTGAAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.............::........x.x::x...x..:.......::....x.xx:..:..:..------:.x...:..... 67M6D12M 58/79 73.4% 79/94230402 0.0% 6/79 7.6% -22674782 -71555620 +3707 chr4 + 190214555 53376446 53376445 53376528 83 CATGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......::.--....:.:...........::........x.xx:x...x.:.....:.....:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -22656751 -71573651 +5025 chr4 + 190214555 53390498 53390497 53390660 163 CATTTTGTAATTTTATAAAACAGGGACAAAAGTCAAAGGAGTAGACCTTGATGCACCTGGAAGCATTAATGGAGTTCCACTCTTAGAGGTAGATTTGGATTCTTTTGAAGATAAACCATGGCGTAAACCTGGTAAGA---------TTATTGTGGATTATATTAATTTCAAT chr4 + 94230402 12244404 12244403 12244575 12244404 12244403 12244575 172 CATTTTCTTTTTCTCCAAAGCCAAGTTGCAGCCCAAAGGTATTGATTTAGATGCCGCAGGGAATATAAATGGATTGCCTGTTATAGAAGTGGATTTAGATTCATTTGAAGACAAACCATGGAGGAAACCAGGTGGGGCCTCACGGTTTCTTGTGGTAAATATTTTTTGCAGT ......x.xx..:.x:...:.x::.x::x.:x:......x:.x..::.x.....xx.x..:.::..x......x.x..xx.:x....:..:.....:.....x........:.........x.x.....x...::.:---------..x......xxx.....xx..x..:. 137M9I26M 108/163 66.3% 172/94230402 0.0% 9/163 5.5% 41146094 NA +6415 chr4 + 190214555 53390998 53390997 53391142 145 TTTATCTTTAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAATGAAGATACCTGGAAAGCTTACTGTGAAAAACAAAAGAGGATACGAATGGGACTTGAAGTTATACCAGTAACCTCTACTACAAATAAAATTACGGTA chr4 + 94230402 12246948 12246947 12247089 12246948 12246947 12247089 142 TTTATC---AGGTGCTGATCTTTCTGATTACTTTAATTACGGATTCAATGAAGAAACGTGGAAAGCTTATTGTGAAAAGCAGCGGCGGCTCCAGCTTGGGCTGGATCCTGCTCCTCCCATCAGCGCTGAAAATAAGATCACGGTA ......---.....................:........:..:..:........x..x...........:........:..:x:.x..x.x.::x.x..:..x..xx:.::x..xx:x.:.xx::..:x......:..:...... 6M3D136M 103/142 72.5% 142/94230402 0.0% 3/142 2.1% 41144050 NA +7156 chr4 + 190214555 53414568 53414567 53414727 160 AGAGACAACAATATGTAAGAAAAAACATAGAAAATTTATCTCACCAGAAACAGCACTTCTTCTCAGTC--TCAGACAAGTACTGCCTCCAGAAAAGCCAATTCAAGCGTTGGGAAGTGGCAGGATCGATATGGGAGGGCCGAATCACCTGATCTAAGGTAAG chr4 + 94230402 70140610 70140609 70140767 70140610 70140609 70140767 158 AGAGAAAACAAGACACAGGGACAAA----GGGGACGTATCCCACTAGAAACAGTACTGCCAGTCAGTCATGCAGACAAGAACTGCCTTCAGAAAAGCCATTTCAGGCAGAGATAAATAGATGGATCAATATGGGAGGGGCAAATCACTTGACCTGAGGCAGG .....x.....x.:::.:.:.x...----.:::.:x....:...:........:...x.:xx......--x........x.......:...........x....:..:xx.:x..:.:.xx.....:...........x.:......:...:..:...:.:. 25M4D39M2I92M 114/156 73.1% 158/94230402 0.0% 6/156 3.8% -16726042 -77504360 +3184 chr4 + 190214555 53450543 53450542 53450627 85 TGCATGGTGGCCTGCGCCTGTAATCCTAGCTATTTGGGAGGCTGAGGTGGGAAGATCACTTGAGCCTGAGAGTTCAAGGCTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::....--...:.x....:.:.:.....:...::........x:xx.x::.x.......:..::::..:.:x:.....:.. 10M2D73M 54/83 65.1% 83/94230402 0.0% 2/83 2.4% -22582652 -71647750 +5326 chr4 + 190214555 53461431 53461430 53461599 169 TTACCTAATTCTTCCATCATTGTATGCTGGTGTTCCTTCAACAATGGATTTGATGAAAAAAGGTTTGTTTCCATTGTATTCTTCATAACCTCCTACAATGCAGAAGCCCAGACTTCCAGCTGTGTTTCTTCGTAATACAATATCTTTACAGTTATACAAGCACCTGAAA chr4 + 94230402 12266677 12266676 12266845 12266677 12266676 12266845 169 TCACTTCAGCCTTGCGCTGCGGCAGGCAGGCGTCCCAGGCACGATGGTTTTGATGAAGAAGGGCTGGTTTCCTTTGCTCTCCTCAAAGCCTCCAACAATGCTGAAGCCCCAGCTTTCCTGGTTGCCTTTGCTAAGGACAATATCTTGACAGCAGTGAAGGTAGCTGCAA .:..:.x.x:...x.:::::x.:.x..x..:..:..xxxx..:....x.........:..:..:.x......x...:x:..:...x.:.....x.......x.......x::...:.xxxxx..::.:.x.xx.:x..........x....:x:.:x.:.:.x...x.. 169M 106/169 62.7% 169/94230402 0.0% 0/169 0.0% 41194754 NA +3096 chr4 + 190214555 53473802 53473801 53473865 64 AAATAAAAGT--TAAAAGCCAAGAAAGCAAAATGGAGAAAAAAGAGTTGAAAAGGATCCGAGAACA chr4 + 94230402 47895458 47895457 47895523 47895458 47895457 47895523 66 AAACGTAAGTCCTAAAAACAAAGAGAACCAAATGAAAAAAAAAGAGTTAAAAAGGTGCCAGGAGCA ...::x....--.....:.x....:.:.x.....:.:...........:......xx..::..:.. 10M2I54M 48/64 75.0% 66/94230402 0.0% 2/64 3.1% 5578344 NA +4328 chr4 + 190214555 53503995 53503994 53504077 83 CATAGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAAGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...........--....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 63/81 77.8% 81/94230402 0.0% 2/81 2.5% -22529202 -71701200 +3565 chr4 + 190214555 53506197 53506196 53506259 63 CTGGGCTAGTTACCTAATCCCTCTGGGTCTCCGTTTTCTCATCTGTAAAATGGGAATGATAGT chr4 + 94230402 83501145 83501144 83501207 83501145 83501144 83501207 63 CTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGT ......x.:....:...:.:x.x..x.:...x......:..:...........::x....... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -29994948 -64235454 +3103 chr4 + 190214555 53519509 53519508 53519579 71 TTGTATTAGGCCCATCTTATAGATGGGGAAAATGAGGCTCAAAGAGGTTAAGTAATTTATCCAAGCTGACA chr4 + 94230402 82283115 82283114 82283185 82283115 82283114 82283185 71 TTGTATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACA ........x:x:...:.:...x.........x..:.:.x..::x..:......:.:.x.:.:...x.x... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -28763606 -65466796 +3748 chr4 + 190214555 53520826 53520825 53520904 79 GTGGTGAGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--....:.:...........::........x.xx.x...x...........:.:..x.xx:.....:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -22512375 -71718027 +3353 chr4 + 190214555 53554716 53554715 53554794 79 GTGGTGGGTGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTAAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::..--...:.:...........::........x.xx.x...x.....:.....:.:..x:xx:..:..:.. 11M2D66M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -22478485 -71751917 +3003 chr4 + 190214555 53560762 53560761 53560813 52 GTAATCCTGGGCTTCCTACCCTTAGACTTTGTATTACATGAGAAAAACAAAA chr4 + 94230402 49693249 49693248 49693300 49693249 49693248 49693300 52 GCAGTCCTGCATCTCCTACCCTCAGACTTTGTATTACATGTGGAAGTTAAGA .:.:.....x:::.........:.................x.:..:x:..:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 3867513 NA +3299 chr4 + 190214555 53606445 53606444 53606520 76 CCTACCAACCAGAAAAAACAAACAAACAAACAAAAAACAAACAAAAAAAAAACAGAACAA-GACAGATTCACAGCCA chr4 + 94230402 37643077 37643076 37643153 37643077 37643076 37643153 77 CCTACTATCCAGAAAAGCAAAACAAAGTAAAAACAAACAAACAAAAAACAAACTGAAAAGTTACTGATTCAAAATCA .....:.x........:xx.......xx..x..x..............x....x...x.:-x..x......x.::.. 60M1I16M 58/76 76.3% 77/94230402 0.0% 1/76 1.3% 15963368 NA +3178 chr4 + 190214555 53639893 53639892 53639963 71 CATGTTGGCGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCACAAAAATTGCTTGAACCCAGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::x...:...:.--.:..:.:...........::........x.x::x:..x::............:.. 14M2D55M 49/69 71.0% 69/94230402 0.0% 2/69 2.9% -22393304 -71837098 +3317 chr4 + 190214555 53644271 53644270 53644330 60 TGCTCCTGTAGCCCTAGCTACTTGGGAGGCTGAGGCACGAAAATCGCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x.x.....::.:.........::........x.x:.x:..x.:...........:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -22388934 -71841468 +3007 chr4 + 190214555 53662442 53662441 53662481 40 AGAAGATGCCTGCAAAGAAACCTCTTTCTCTCTTCCAAAT chr4 + 94230402 83823248 83823247 83823287 83823248 83823247 83823287 40 AGAAAACATCTGCAAAGAAACCTTTTTCTCTCTTTCAAAT ....:.:::..............:..........:..... 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% -30160806 -64069596 +3000 chr4 + 190214555 53670826 53670825 53670925 100 TCCTTCCTTCCTCCCTTTCCCTTTTTTCCTTCCTTCCTTCCTTCCCTCCCTTTCATTTCTTTTTCTTTTTGTTCTTCTCTTTCTTTCTCTCTCTCTCTTT chr4 + 94230402 40367307 40367306 40367406 40367307 40367306 40367406 100 TTTTTTTTTTCTCCTGGATGTTTTTCTGGGACCTGCCTGCTTTCTCTGTTTAGCATCTGTTTCTGCCTATTCTCTTTTCTTTCTTTCCCTTTCTCCCTTT .::..::..:....:xxx:x:....:.xxxx...x...x.:...:..x::.xx...:.x...:.x::.x.x:....:..........:..:....:.... 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 13303519 NA +3272 chr4 + 190214555 53670880 53670879 53670969 90 ATTTCTTTTTCTTTTTGTTCTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCCTCTTC------------------TTCTTTTTTCCTTTTTTTTTCCCTTTTTCTGTTT chr4 + 94230402 34734801 34734800 34734908 34734801 34734800 34734908 108 ATTTCTTTATTATAATGATTTTCCTTCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTT ........x.:x.xx..x.:...::.:...:....::.:.xx:..:...::...:.------------------..:......x.........:....x.:.:..... 56M18I34M 63/90 70.0% 108/94230402 0.0% 18/90 20.0% 18936079 NA +3030 chr4 + 190214555 53670898 53670897 53670951 54 TCTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCCTCTTCTTCTTTTTTCCTTTTT chr4 + 94230402 92143392 92143391 92143445 92143392 92143391 92143445 54 TCTACTCCCACTACCTCATGCTCCCTTTCTCCCTCTCCCTCTTTTTTCCTTTTT ...x...::x..x:...x:x...:......:.....:.:............... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -38472494 -55757908 +4161 chr4 + 190214555 53694563 53694562 53694644 82 CATGGTGGTGCACGACTGTAGTTTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAGAG-GTGGGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--.......:..........::........x.xx.x...x.:..........::..-x.x......:.. 14M2D54M1I12M 64/80 80.0% 81/94230402 0.0% 3/80 3.8% -22338634 -71891768 +3343 chr4 + 190214555 53717468 53717467 53717521 54 TCTGAGTAAGGCACTTAGTCTCCCTGTGCCTTAGTTTTCCCATCTGTAAAATGG chr4 + 94230402 83501144 83501143 83501197 83501144 83501143 83501197 54 TCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGG ....:.:..:x:.....::..x:x.......:..........:........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -29783676 -64446726 +3167 chr4 + 190214555 53758371 53758370 53758415 45 CTCAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 88547318 88547317 88547362 88547318 88547317 88547362 45 CTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ...................x:........:...:.:.:.:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -34788947 -59441455 +3172 chr4 + 190214555 53758375 53758374 53758425 51 AAAAAAAAAAAAAAAATATATATATATATATATATATATATATGCATGCAA chr4 + 94230402 1495006 1495005 1495056 1495006 1495005 1495056 51 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA .........x.:....x..........:.:..:...:.....x::...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 52263369 NA +3081 chr4 + 190214555 53776996 53776995 53777105 110 CTCCATCTCAAAAAAAAAAAAAAAAGAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAGAAAGGACGTTTGGGGGGATGAATGACCTTGAAGCATTTCTGAACACTCCATAA chr4 + 94230402 66239271 66239270 66239380 66239271 66239270 66239380 110 CCCCCCCTCAAAAAAAAAAAAAAAAGTAGTGAAAACAAAGTAGTGAAAACATAGGATACAATCTAATGCTGAGCATCTATAGCTTTTGACCTTTTCTGTTCACTCCAAAA .:..x:....................x..x:.:..x....x.:x:....x.x..:.x.x.:xx::x.xxx.:.x..xx..::.:..x:.x.x......xx.......x.. 110M 70/110 63.6% 110/94230402 0.0% 0/110 0.0% -12462275 -81768127 +3135 chr4 + 190214555 53783599 53783598 53783643 45 GTTTCTTTATCTCTCTCTCTCTCTTTTTTTTTTCTTTTTGACAGG chr4 + 94230402 56633337 56633336 56633381 56633337 56633336 56633381 45 GTTTCTTTCTCCCTCCCCCTCTCTCTTTTTTTTTTTTTTAATAGG ........x..:...:.:......:........:.....:.:... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -2849738 -91380664 +3215 chr4 + 190214555 53783604 53783603 53783655 52 TTTATCTCTCTCTCTCTCTTTTTTTTTTCTTTTTGACAGGGTATTGCTCTGT chr4 + 94230402 45847284 45847283 45847335 45847284 45847283 45847335 52 TTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTTCTGT .................:..........:.....xx..x..xxx..:..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 7936320 NA +3177 chr4 + 190214555 53867339 53867338 53867418 80 GGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 41112180 41112179 41112259 41112180 41112179 41112259 80 GAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .:...:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::.x... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 12755159 NA +3089 chr4 + 190214555 53885109 53885108 53885182 74 CAGCAGAGCAAGACCCTCTCGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535419 9535418 9535492 9535419 9535418 9535492 74 CATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ..x....:x.x..x.x...x.....:.:...:.x...:.........:.x:.::..::....xx.:.:...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 44349690 NA +3276 chr4 + 190214555 53894105 53894104 53894187 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTCCAGAGATTGAGGCAGGAGAATCGCTTGAACCCAGGACGCAGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.........:x.:..::....x.xx.x...x.:...........:.xx:xx...:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -22139092 -72091310 +3189 chr4 + 190214555 53901548 53901547 53901633 86 AAGAGGGAAGGAAGGAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAAGGGAAGGGGAGGGGAGAAAGGGAAGGGAAGG chr4 + 94230402 70338958 70338957 70339042 70338958 70338957 70339042 85 AAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGT-GAAAGCAACCGGGAGG ...:..:..::...:.....:x...:.::.:.:.::...:..x:...:...x.:x...:x......:.x-.....x:.xx..:... 69M1D16M 55/85 64.7% 85/94230402 0.0% 1/85 1.2% -16437410 -77792992 +3053 chr4 + 190214555 53901564 53901563 53901609 46 AGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAAGGGAAGG chr4 + 94230402 36268838 36268837 36268883 36268838 36268837 36268883 46 AAAAGGGAGGGAGGACTGCAGGGAGGAAGGGAGAGGGAAGAGGAGG .:............:xx.x.......:......:......:.:... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 17632726 NA +3467 chr4 + 190214555 53903359 53903358 53903512 154 AAAGGAAGGAGGGAGGGAAGGAGGGGGG---GGAAGGGAGGGGAGGGGAGAGAGAGAGAAAGAGAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAG---AAAAGAAAGAAAGAAAG chr4 + 94230402 24562510 24562509 24562666 24562510 24562509 24562666 157 AAAGCAGTAAGCAAAGGAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATC-AGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATATGAGACTGAA--AAGCCAAAACAGAAACAAAACAGATCAAAAGAAAAAACTAAAG ....x.:x:..x:.:....:...:x..:---..x.x..:x...x..:............:.:.xx-.:.:...:..::.x......:.::.x.x...xx.x:.x:x:...xx...--..:xx..:.x.....x....x..---........:..xx.... 28M3I34M1D49M2D23M3I17M 99/151 65.6% 157/94230402 0.0% 9/151 6.0% 29340849 NA +3078 chr4 + 190214555 53903435 53903434 53903501 67 AGAAAAGAAAGAAAGGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAAGA chr4 + 94230402 21369207 21369206 21369273 21369207 21369206 21369273 67 AGAAGAGGAAGGAGGCAAAGAAAAAGGAACAAAATTAGGGAAAAAAATAGGAAGCAAGAAGAGAAAA ....:..:...:.:.x.....:....:..x...:xx..::.:...:.x..:...x..:....:..:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 32534228 NA +3306 chr4 + 190214555 53919013 53919012 53919078 66 CCTCTTGACTCCTTTTTTCTTCCTTCATTTCTTTCTTTCTTTTTTCTTTTTTCTTGAGACAAAGTC chr4 + 94230402 70062263 70062262 70062328 70062263 70062262 70062328 66 CCCCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTTGTAACTAAGTC ..:...xx..x...::.x....::...:..:...:...:.....:...x.......x:..x..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -16143250 -78087152 +3217 chr4 + 190214555 53925183 53925182 53925296 114 GCTGTGTGGCCTTTGGCAAGTTACTTAACCTCTCTGTGCCTCCATTTCTTCATCTGTAAAATGCAGCTAATAGTAGAAGGATATATCTACTTTATAGGGTGGCATG--AGCATCAT chr4 + 94230402 79037111 79037110 79037221 79037111 79037110 79037221 111 GCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAAT-----GATTTTCCACCTTTCCAAAGTGCTTTGAAAGCATTAT .....:..:....x..x......:..x.::.x....x.::..x...:..:..xx.:.......::.xx....:.-----...x.x:.xx....x:.::...x:x..--.....:.. 74M5D27M2I8M 73/109 67.0% 111/94230402 0.0% 7/109 6.4% -25111928 -69118474 +4380 chr4 + 190214555 53925190 53925189 53925281 92 GGCCTTTGGCAAGTTACTTAACCTCTCTGTGCCTCCATTTCTTCATCTGTAAAATGCAGCTAATAGTAGAAGGATATATCTACTTTATAGGG chr4 + 94230402 83501141 83501140 83501226 83501141 83501140 83501226 86 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAA------TTACCTACCTCACAGGG .:.::.x.....:...........x.x........x:...:::..:..........x....:......:------x..:....:.:.:.... 69M6D17M 65/86 75.6% 86/94230402 0.0% 6/86 7.0% -29575951 -64654451 +3423 chr4 + 190214555 53947825 53947824 53947994 170 CCTTATAATCTCCC---TCTCTCTCTCTCTCTCATATATA---ATATATATTATATTATATACTAAATTATATAATGTAATATAAAGAGATTTATGAGG----------ATGTTTATTATAATTTATACACGTAGGTGTGTGTGTATATATATATGTA-AGGGCTCAATAGGCTCAGAAATCTCACT chr4 + 94230402 72529159 72529158 72529325 72529159 72529158 72529325 167 CCATACAATCTCTCAGGTCCCAAATTCTGATTCATACATATACATATATATATTTTTATATTC----------------ATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGT----GAAATTTTACT ..x..:......:.---..:.xxx:...xx:.....:...---........xx.x......x.----------------..:..x.:..x..:x..:x.----------.::.:.....:.x...........:x..........:.:..:....:..-.:..:.:xx...x----.....:.:... 14M3I23M3I20M16D20M10I49M1I13M4D11M 107/150 71.3% 167/94230402 0.0% 37/150 24.7% -18581334 -75649068 +3346 chr4 + 190214555 53947828 53947827 53947994 167 TATAATCTCCC---TCTCTCTCTCTCTCTCATATATA---ATATATATTATATTATATACTAAATTATATAATGTAATATAAAGAGATTTATGAGG----------ATGTTTATTATAATTTATACACGTAGGTGTGTGTGTATATATATATGTA-AGGGCTCAATAGGCTCAGAAATCTCACT chr4 + 94230402 72525589 72525588 72525752 72525589 72525588 72525752 164 TACAATCTCTCAGGTCCCAAATTCTGATTCATACATATACATATATATATTTTTATATTC----------------ATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGT----GAAATTTTACT ..:......:.---..:.xxx:...xx:.....:...---........xx.x......x.----------------..:..x.:..x..:x..:x.----------.::.:.....:.x...........:x..........:.:..:....:..-.:..:.:xx...x----.....:.:... 11M3I23M3I20M16D20M10I49M1I13M4D11M 105/147 71.4% 164/94230402 0.0% 37/147 25.2% -18577761 -75652641 +3113 chr4 + 190214555 53960368 53960367 53960427 60 TGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGGATTTTCTTTTTTTTTTTAATTAATTTA chr4 + 94230402 33251003 33251002 33251062 33251003 33251002 33251062 60 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTA .............:.:.:.....:.:...x.:.x....x...x.....x.x...xx.... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 20709365 NA +3055 chr4 + 190214555 53977200 53977199 53977268 69 GTGGTGGAACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAAGCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:...........::........x.xx.x...x::......x.::.:.. 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% -22056001 -72174401 +3482 chr4 + 190214555 53980601 53980600 53980683 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGCCACGAGAATGGCTTGAGCCAGAGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:...........::..........x:.x...xx:.....:..x:::..x:xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -22052596 -72177806 +3057 chr4 + 190214555 53988391 53988390 53988423 33 GTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTG chr4 + 94230402 22713672 22713671 22713704 22713672 22713671 22713704 33 GTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTG ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 31274719 NA +3074 chr4 + 190214555 54004045 54004044 54004115 71 AAAAAAGAAAAAAAACCGTGTTTATTTGGCAGTGGGATTAATATCTTAATAATGAAAGTAAAAACATAATA chr4 + 94230402 15356527 15356526 15356597 15356527 15356526 15356597 71 AGAAAAAAAAAAAGATAAATTTTATGTGAGAGTTATATGAATATGTTAATAGTGAAAGTAAAGATGTACTA .:....:......:.:x:xx.....x..:x...x:x..x.....x......:..........:.::..x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 38647518 NA +3509 chr4 + 190214555 54017389 54017388 54017502 114 CATCTTTAATTTTCTTTAAGAGAATTTAGTGCTTGTGAAAAGCACCAGATTGATAGTCATGGGAACTAAAA----------ATCTATTTAGCTGAAAGAACAGGGGAAGGGGCAGTGCAGGCTT chr4 + 94230402 27303297 27303296 27303420 27303297 27303296 27303420 124 CATTTTAACTTTTATTCAACTGAATTTAGTGCTTGTGAAAAGCGTTGGATTGTTATTTCTGGAGACTGATATATTTCATTTATCCTTGTAGCAGGTACACTTTAAGTAGTGGCAATGTAGTCCT ...:..x.x....x..:..xx......................::::.....x..x.:x...::...:.x.----------...:x.x....x.:x.x.x:xx::.x..x....:..:..x.:. 71M10I43M 76/114 66.7% 124/94230402 0.0% 10/114 8.8% 26714092 NA +3313 chr4 + 190214555 54025731 54025730 54025804 74 GCACACATGTGGTCCCAGCTACTTGGGAAGCTGAGGTGGGAGGATCACTCGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...:...:..:...........::.:......x:xx.x.:.x....:..:..::.:..x.:x:.....:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -22007473 -72222929 +3380 chr4 + 190214555 54026389 54026388 54026462 74 GTGCACCTGTAGCCCCAGCTACTTGGGAGACTGAGGTAGGAAAACTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.....::...........::..:.....x:xx.x:..x::.........:.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -22006815 -72223587 +3028 chr4 + 190214555 54030609 54030608 54030677 69 AAAATATATAAATATATATACACACATATATATATGTTTATATTTACTAAAATGCTAATTTTTTTTTTT chr4 + 94230402 41650595 41650594 41650663 41650595 41650594 41650663 69 AACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTTTTCTTCTTTT ..x.......x...............:.:.::...x..xxx.x...:.xx.....x:x...:..:.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 12380014 NA +3321 chr4 + 190214555 54067293 54067292 54067341 49 TGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTCTTTTTCCTGTT chr4 + 94230402 41434315 41434314 41434363 41434315 41434314 41434363 49 TGTCTGGGTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTT ......x..:.x...........:............:::....::.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 12632978 NA +3422 chr4 + 190214555 54074981 54074980 54075053 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCAGGGAGATCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x:xx.x.:.x.......:..x:.:..x.:x:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -21958224 -72272178 +3016 chr4 + 190214555 54079209 54079208 54079249 41 CATTTAAAGCAAACAAAGAAACAACAACAACAACAAAACTT chr4 + 94230402 89758358 89758357 89758398 89758358 89758357 89758398 41 CATCTGAAACAAACAAACAAACAACAACAACAACAAAAATT ...:.:..:........x....................x.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -35679149 -58551253 +3164 chr4 + 190214555 54080920 54080919 54080992 73 AATCATTTCACAATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATAAAATCA chr4 + 94230402 82338429 82338428 82338501 82338429 82338428 82338501 73 AATTATATTATAAAGTGTGTATATATGCACACATATCTAGATAGACATGTATATTTAATCACATACGAAATCA ...:..x.:.:..x......:.:...::.:.:....x..x...x.:..:.....x..xx:.:...::...... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -28257509 -65972893 +3022 chr4 + 190214555 54082969 54082968 54083029 61 AGGCTGATGCCATTTTTATTTCTACTCTCACTTTCTTTTTTCTTTCTTTCTTTTTTTTTTT chr4 + 94230402 22344060 22344059 22344120 22344060 22344059 22344120 61 AAGCTTATGAGTCCTTCATTTCCAATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCT .:...x...xxx::..:.....:.x.:...:...x::........:.............:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 31738909 NA +3118 chr4 + 190214555 54082981 54082980 54083029 49 TTTTTATTTCTACTCTCACTTTCTTTTTTCTTTCTTTCTTTTTTTTTTT chr4 + 94230402 8296024 8296023 8296072 8296024 8296023 8296072 49 TCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT .:...:...:x...::x.:....:..................:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 45786957 NA +5594 chr4 + 190214555 54101584 54101583 54101892 309 GGCTCTGACGCCA-GCCAGGTACCCAATGGCAAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTAC-CTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAGGGGAAGGGCACGCAGAGGAACAGTCACGCGGGCTGCAAGTGCGTCGGGAGCCAGGTGCACTACGCGCGCTCCGAGGATGAGGACTCCCTGTCGCCGGCCTCAGCC chr4 + 94230402 87441632 87441631 87441932 87441632 87441631 87441932 301 GGCTCGGACTCCAAGTCGGGCAAACCCCGGC----GGGCGCGGACAGCTTTCACCTACGAGCAGCTGGTGGCGCTGGAGAACAAGTTCAAGTCCACGCGGTACCTGTCG-GTGTGCGAGCGCCTCAACCTGGCGCTCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCACCAAGTGGAAGAAGCAGAACCCGGGCGCCGACACCAGCGCGCCCACCggcggc-ggcggggcgggcggcggg-gcgggcggggcgctgggcggaggggcgctgccggg---cggCCTCAGCC .....x...x...-.:.:..:.xx.xx:...----..::.x....:..x.....:x:.:x...:..xx...x........:x:.:...xxx....xxxx.........x-.xx.x..::x.x:.x..x::.x.:..:x.-..x.:...xx.x....x.........:........:...........x::x...::x......x..::xxx....:.xx.x.xx.:.:xx.x.:.x...x..-:.:.x.x....x.x.:..-..:xxxx.x.....xx.x...x.:.x:..x..x.x---........... 13M1I17M4D74M1D29M1I102M1D18M1D35M3D11M 189/299 63.2% 301/94230402 0.0% 12/299 4.0% -33340048 -60890354 +5183 chr4 + 190214555 54101613 54101612 54101807 195 CAAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTACCTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAGGGGAAGGGCACGCAGAGGAA chr4 + 94230402 81776550 81776549 81776744 81776550 81776549 81776744 195 CAGGAAGCCCCGGACGCCCTTCACCACGGCCCAGCTGCTGGCCCTGGAGAGGAAATTCCGCCAGAAGCAGTACCTGTCCATCGCTGAGCGTGCCGAGTTCTCCAGCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCGCCAAGGCCAAGCGGCTGCAGGAGGCCGAGCTGGAGAA ..:..:.x:xx.....x.x.....:.xx:.x..:..x....xx........::.....:x::xx..xxx.........:xxxx::x:.x.x:::..:x..x...x:.xx..x.:...xx.x....x.........:........:...........x.:x...xx....x:.xx.x:.:...x.:x..x.::... 195M 120/195 61.5% 195/94230402 0.0% 0/195 0.0% -27674937 -66555465 +3295 chr4 + 190214555 54118937 54118936 54119010 74 GTGTACCCATAGTCCCAGCTACTTGAGAGGCTGAGGTGGGAAGATCGCTTGAGCTCTGGAATTCCAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..x::....:............:........x:xx.x::.x.:.....:.:.x.:.::.:::.....:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -21914267 -72316135 +3099 chr4 + 190214555 54133277 54133276 54133382 106 AGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAACAGAGAGAGAAAGAGAGAGAGAGGGGAGGGAGGGAGGG chr4 + 94230402 55125864 55125863 55125969 55125864 55125863 55125969 106 AAAAGAGGAGGGAAAGCAAGGGTCAGAGTGAGGGGAAAAAATGGCAAAAACACATGAAGAAAAAAGAACAGAGAGATGTAAAGAGCAAGCTGCAATGGAGAAGGGG .:.::::...:.....x...::xx.:..x:..::::...:.x:.x..:..x:x.x:......:..:..........x:x.:....x:..xx.x:.x....:::... 106M 62/106 58.5% 106/94230402 0.0% 0/106 0.0% -992587 -93237815 +3041 chr4 + 190214555 54133300 54133299 54133371 72 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAACAGAGAGAGAAAGAGAGAGAGAGGGGA chr4 + 94230402 37029267 37029266 37029338 37029267 37029266 37029338 72 GGAGGAAAGCAAGGAAGACAAAATGAAAGGATGAACAATGAAAAAGATGGAAATAAAGAGAACAAGTGAGGA .:.:.....x...:....x.:..x.....:.x:..x..x......x.x:..:.x.......:x:..x.:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 17104033 NA +3273 chr4 + 190214555 54133300 54133299 54133368 69 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAACAGAGAGAGAAAGAGAGAGAGAGG chr4 + 94230402 43459369 43459368 43459437 43459369 43459368 43459437 69 GGACAAATAAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAG .:.x:..x:..:....x.x:.x..:...:..:...x...x.........xx....:...........:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 10673931 NA +3026 chr4 + 190214555 54135654 54135653 54135713 60 AAAATAGATTAAAGACTTAAATCTAAGACATGAAACTACTGGAAGAAAACATTGGGGAAA chr4 + 94230402 81722167 81722166 81722226 81722167 81722166 81722226 60 AAAAAAAGTTGAGGGCTGACATATATGGCATGAAGCTAATGGAAGAACACACTAGGGAAA ....x.::..:.:.:..x.x..x..x.:......:...x........x...:.:...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -27586513 -66643889 +3771 chr4 + 190214555 54142890 54142889 54142954 65 AGTGG-GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATCACTTGAACCTAGAGGC chr4 + 94230402 76033200 76033199 76033265 76033200 76033199 76033265 66 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .....-....x......:.........:.::........x.xx.x...x..........:...:.. 5M1I60M 53/65 81.5% 66/94230402 0.0% 1/65 1.5% -21890310 -72340092 +3121 chr4 + 190214555 54157101 54157100 54157192 92 TGGGTGATAGAGTGAGACCTTGTCAAGAGAAAGGAAGGAAGGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAGGA chr4 + 94230402 24028113 24028112 24028202 24028113 24028112 24028202 90 tAGGATATAACATGGGATTTTCTTAAGTGAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAG--AGAGAAGAGAGAAGAAGCAGAGA .:..xx...:x:..:..::..x.:...x..:.::.:.:..:xx:..........::..:....:...--.:..::.:.:..:....x.::.. 67M2D23M 56/90 62.2% 90/94230402 0.0% 2/90 2.2% 30128988 NA +3302 chr4 + 190214555 54157108 54157107 54157208 101 TAGAGTGAGACCTTGTCAAGAGAAAGGAAGGAAGGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAGGAAGGGGGGAGGGAGGGA chr4 + 94230402 75729030 75729029 75729122 75729030 75729029 75729122 93 TGGAAAGAGATGTGGCAGAGAGAAATTGTAGATGGAGTAAAGGGGGGA--------AAAAAAAGGAGGGGGGGGGGGGGGATGGAAAGGCAAAGGGAGTGA .:..:x....:x.x.:x:.......xx:x:..x...:x:.........--------...:...:::.......:..::...x....:..x::......x.. 48M8D45M 62/93 66.7% 93/94230402 0.0% 8/93 8.6% -21571922 -72658480 +3592 chr4 + 190214555 54157110 54157109 54157237 128 GAGTGAGACCTTGTCAAGAGAAAGGAAGGAAGGA-------AGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAGGAAG--------------GGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGA--GGAAGGAAGGG chr4 + 94230402 84536553 84536552 84536703 84536553 84536552 84536703 151 GAATGAGGCCTTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAG ..:....:..........:......:.:::.::.-------.::..x:..:::x.:..::.....::......:.:...:....xx.x.x..--------------.::.x.xxx.:.::.....x...x:.::....--..:......:. 34M7I51M14I32M2I11M 83/128 64.8% 151/94230402 0.0% 23/128 18.0% -30379443 -63850959 +3644 chr4 + 190214555 54161694 54161693 54161767 74 GCGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAGCCTCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:.:...........::........x.x..x...x.......:..:x.:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -21871510 -72358892 +3239 chr4 + 190214555 54162132 54162131 54162203 72 GCACCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....x.:...........::........x.xx.x...x.::.......::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -21871074 -72359328 +3245 chr4 + 190214555 54170678 54170677 54170765 88 TAATGACACTGAGGTGCATTTTGTATTTACCCTTCCTGTTCTGTTCCCTTTTTTTCTCTTCCCTTTTTCATTTTTTCCTAGTTCCTCT chr4 + 94230402 92744426 92744425 92744508 92744426 92744425 92744508 83 TACTCATACCGATATGCATACTGTGTTTGCCCTCGTTGTTTTGCTCCCTTTTGTTTCATTTCAACTTTCTTTTCTTC-----TCCTCT ..x.x.:..:..x:.....x:...:...:....:x:....:..:........x..::x..:.xx:....x...:...-----...... 77M5D6M 58/83 69.9% 83/94230402 0.0% 5/83 6.0% -38573748 -55656654 +3571 chr4 + 190214555 54179853 54179852 54179942 90 GTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGAAGGTGGAGGTTGCAGTGAGCCAAAATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.x....:.:.:.........::........x.xx.x...x.:.........:....x.xx:..:..:..------..x..x...... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% -21853353 -72377049 +3134 chr4 + 190214555 54180700 54180699 54180780 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTGCTTGCTTGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:.:.::..x:....xx:.........:...::...x.....x..xx:.x...:. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -3191329 -91039073 +3074 chr4 + 190214555 54180704 54180703 54180774 71 TTCCTTCCTTCCTTCCTTCCTTCCCTCCCTGCTTGCTTGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 57372029 57372028 57372099 57372029 57372028 57372099 71 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ..:...:::.:x.:...x:.:...:..:.:x:...x:....x.:.........:...::...x.....x.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -3191325 -91039077 +3806 chr4 + 190214555 54189987 54189986 54190059 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -21843218 -72387184 +3082 chr4 + 190214555 54192121 54192120 54192199 79 TAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAACGAGGCTGAGGGCTGGGTCCAGTGGCTC chr4 + 94230402 82629046 82629045 82629124 82629046 82629045 82629124 79 TAAAAAAAGAAAAAAAAAAAAGGCAAAATTTGAAGTATGGAAAAGAAAATGAGGGCCAGAAAACAAATCTCAGTGGCTC ........:.............:x.:..xxx:...x.x:..........x:x.:.x.x..:::.x::x::......... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -28436925 -65793477 +3164 chr4 + 190214555 54192325 54192324 54192407 83 CATGGTGGCATGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGTAGGAGGATCACTTGAGCCCCAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x...:..:.........:.::........x:xx.x.:.x.......:...x::..x.xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -21840872 -72389530 +3392 chr4 + 190214555 54195754 54195753 54195836 83 CATGGTGATGCATGCCTGTAGTCCCAGCTACTCGAAAGGCTGAGGCAGGAGTATTGCTTGAACTAGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:....:.--......:.........:...........x.xx.x.x.x::.......:x:....x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -21837443 -72392959 +3158 chr4 + 190214555 54196057 54196056 54196138 82 ACATGGTGGCATGAGCTTTAGTCCCAGCTAATTGGGAGGCTGAGGTGTGAGGATCCCTTGAGCTCAGGAGGTTGAGGCTGCA chr4 + 94230402 76033196 76033195 76033276 76033196 76033195 76033276 81 ACACAGTGGTGCACG-TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...::....::::x.-.x....:.......x...::........x:x..x.:.x.x.....:.:...:..x..x:.....:. 15M1D66M 55/81 67.9% 81/94230402 0.0% 1/81 1.2% -21837139 -72393263 +3081 chr4 + 190214555 54200537 54200536 54200617 81 TATATATATATATATATATATATATATATATATATATATATATATACACACACATATATATACACACACACACATATATAT chr4 + 94230402 58675362 58675361 58675442 58675362 58675361 58675442 81 TGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATAT .:.x.:...x.:x.:x.:x..x.x..:.:..x.x.:...::.....:.:....x:....:.:.........x..x...... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -4474825 -89755577 +3040 chr4 + 190214555 54200554 54200553 54200649 96 ATATATATATATATATATATATATATATACACACACATATATATACACACACACACATATATATACATATATGTGTGTAT---ATATATATATCTGATA chr4 + 94230402 54005688 54005687 54005786 54005688 54005687 54005786 99 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTA .:.:....:...x........:...:.:.........x.x..x.::x.xxx::....x.x.xx.......:.:.:x....---x.x....:..x..x.. 80M3I16M 65/96 67.7% 99/94230402 0.0% 3/96 3.1% 194866 NA +3202 chr4 + 190214555 54205049 54205048 54205119 71 CATCTGTTGTCTCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGTCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x...x..::..........::........x:xx.x.:.x.......::....:..x.:x:.....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -21828158 -72402244 +3455 chr4 + 190214555 54209582 54209581 54209641 60 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATATATATATATAACACA chr4 + 94230402 46760562 46760561 46760620 46760562 46760561 46760620 59 AAAATAAGAAAGGGGGGGAAAAA-AAAGAGAGAAAGAGAAAAATATATATATATAACGCA ...:x.......:::.::.:...-.....:.......:.:.................:.. 23M1D36M 47/59 79.7% 59/94230402 0.0% 1/59 1.7% 7449020 NA +3059 chr4 + 190214555 54217189 54217188 54217245 57 GTTCTTCTTACTTTTTTTTTTTTTTTTTTTTTTTTAATGAGACACAGTCTCCCTCTG chr4 + 94230402 27947708 27947707 27947764 27947708 27947707 27947764 57 GTTGTTGTTGTTTTTGGGTTTTTTTCTTTTTTTTTAATGAGGGACAATCTTACTCTG ...x..x..::....xxx.......:...............:x...:...:x..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 26269481 NA +3207 chr4 + 190214555 54222627 54222626 54222691 65 TTGTATAATGTCACATCCGTCTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTTTTTTTTTTTTTC chr4 + 94230402 42545365 42545364 42545429 42545365 42545364 42545429 65 TTGGAGTATGTCACTCTCACTCTCACTTATCCCTCTTTCTCCTTCCTCCTTTTTTTTTTTTTTCC ...x.xx.......x::.::::.:x:..x.::....:..........:...............:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 11677262 NA +3126 chr4 + 190214555 54222654 54222653 54222698 45 TCTTTCTCTCTCTCCTTCCTTCTTTTTTTTTTTTTTTCTTTCTTT chr4 + 94230402 87791846 87791845 87791890 87791846 87791845 87791890 45 TCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTT ...::x....:.........:.............::.:....... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -33569192 -60661210 +3230 chr4 + 190214555 54242528 54242527 54242602 75 TCCATAGTCATATTTATATATATATACACACACATATATATGTATGTATGTGTGTATATATATATATTTAAAAGA chr4 + 94230402 64054800 64054799 64054874 64054800 64054799 64054874 75 TCCATAACAATACTTGTATGTGTTTACACGCATACACACATTTATATACATGTATATTTACCTGTCTTTCAAAAA ......::x...:..:...:.:.x.....:..:.:.:.:..x...:..::...:...x..:x.:.x...x...:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -9812272 -84418130 +3187 chr4 + 190214555 54242545 54242544 54242595 51 ATATATATACACACACATATATATGTATGTATGTGTGTATATATATATATT chr4 + 94230402 32744981 32744980 32745031 32744981 32744980 32745031 51 ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATATT .....x.....:...:.:.:.:.x..:..:..........:...:...... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 21497564 NA +3542 chr4 + 190214555 54266852 54266851 54266924 73 TGAGCCTGTAGCCCCAGCTACTCAGGAGACTGAGGTGGGAGGATCACTTGAACCCAGGAGGTTGGGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x.....::.........::::..:.....x:xx.x.:.x.............:..x..x......:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -21766353 -72464049 +4958 chr4 + 190214555 54271552 54271551 54271729 178 CCCTCCCTTCCTTCCTTCCTTCCTTCTTCTCTCCCTCCCTTGTTATCTCTTTTCCTTTCCTTTCT-CTCCTTCCTT---------------CCCTCTTCCCTTTTTCCTTTCTCTCCTTCCTTCCTTCC----TTGCTTCCTTCTTCCCTCCCTCCTTTGTTCTCTCTTTTCCTTTCCTTTCTCTTTTTCTTTCCTTC chr4 + 94230402 9832930 9832929 9833127 9832930 9832929 9833127 198 CTCTCTATTTCTAATTTCTTTATATTTTAATCCAATCCTGTGTTTTTTTCTTCTCTTTATTTCCTTCTCCATCCATACACATTATGAAGCACTTTACTCCCATCtttctttttttttttttttttttACCATATTCCTTTCTTCTTCTCCTTTTCCTTTGTTCTCTCCTTCCCGTGCCTTTCTCTAATTTGTTTCCTC .:...:x..:..xx:...:..x:x.:..xx::.xx...:x....x.:.::..::....x:..:..-....x...x.---------------.::.x:....x.:..:....:.:.::..::..::..x.----..x...:.......:.::::..............:..:..x.x.........xx..:x..:.:.. 65M1I10M15I38M4I65M 114/178 64.0% 198/94230402 0.0% 20/178 11.2% 44438622 NA +3062 chr4 + 190214555 54271721 54271720 54271838 118 CTTTCCTTCCTTCCTTCCTCACTCACTCTTTTCTTTTCCTTTCTCTCCTTCCTTCCTTCCTTCCTCCCTCCCTCACTCTCTCTTTTCTTTGCCTTTCTCTCCTTCCTTCCTTCCTTTT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ....x:.:.::.....:.:x::x:x:...:..:.......:x:...:..x::.:xx.:::.x:..:xxx..:.:...:.:..x:xx::..x.::.:.:...:..:...:......... 118M 65/118 55.1% 118/94230402 0.0% 0/118 0.0% -9425396 -84805006 +3469 chr4 + 190214555 54277369 54277368 54277504 136 TGATTCTGCCTGCCCACAGGTCGGGTCTTGGGGTCTGGAGCGTTTGGGAAGGTGGTTGAAGGAACAGCCTATGG-ATTAAGCCGGTCCCAACCTGTCATGAAAGTTGCAGTGAAGATGCTAAAACGTAAGTGCTCCT chr4 + 94230402 12107479 12107478 12107613 12107479 12107478 12107613 135 TGACTCTTGCTTCTC-TAGGTAAAACACTGGGTCACGGTGCTTTTGGGAAGGTGGTGGAAGCATCTGCTTTTGGCATTGATAAATCTTCAACCTG-CAAAACAGTTGCCGTAAAAATGCTTAAAGGTACATATCCCT ...:...xx..x.:.-:....x::::x:....x:x:..x..x..............x....x.x.x..:.x...-...:.xxx:x:::.......-..x:.x......x..:..:.....x...x...x:.:::... 15M1D58M1I20M1D41M 87/134 64.9% 135/94230402 0.0% 3/134 2.2% 42169890 NA +4753 chr4 + 190214555 54277869 54277868 54278010 142 CTGATATGTGATTTATTCTTTCAACAGCCACGGCCAGATCCAGTGAAAAACAAGCTCTCATGTCTGAACTGAAGATAATGACTCACCTGGGGCCACATTTGAACATTGTAAACTTGCTGGGAGCCTGCACCAAGTCAGGTGG chr4 + 94230402 67070694 67070693 67070835 67070694 67070693 67070835 142 CTGACTTGTATTGTTTTACTTCTGCAGAGGGTGCAACTCACAGTGAGCACAGAGCACTTATGTCCGAGCTGAAGATCCTCATTCACATTGGTCATCATCTCAACGTTGTCAATTTACTTGGAGCCTGCACAAAGCCAGGAGG ....:x...:x.x.x..x:...x:...xx:xx..x.xx:x......:x.xx:...x..:.....:..:........xx.x.:....x.x..x.xx...:.x...:....x..:..:..x...........x...:....x.. 142M 94/142 66.2% 142/94230402 0.0% 0/142 0.0% -12792825 -81437577 +4960 chr4 + 190214555 54277908 54277907 54278019 112 CCAGTGAAAAACAAGCTCTCATGTCTGAACTGAAGATAATGACTCACCTGGGGCCACATTTGAACATTGTAAACTTGCTGGGAGCCTGCACCAAGTCAGGTGG--------GCTCACTGA chr4 + 94230402 12109993 12109992 12110112 12109993 12109992 12110112 120 CTAATGAATGCAAGGCTTTAATGTCTGAACTGAAGATCCTCATCCACATAGGACACCATCTGAATGTAGTCAACCTGCTGGGAGCCTGCACCAAAGCTGGAGGTAAGAAGTGCTCACTAA .:.:....x:xx.:...:.x.................xx.x.::...x.:..:.xx...:....::.x..x...:...................:x.x..x..--------.......:. 103M8I9M 82/112 73.2% 120/94230402 0.0% 8/112 7.1% 42167915 NA +3010 chr4 + 190214555 54278204 54278203 54278250 47 GCCATTCATGGCTCTTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 31315265 31315264 31315311 31315265 31315264 31315311 47 GCCATTTACAGTTCTTCATTAAAAAAAAAAAATAAGGAAAGGAAAAA ......:.::.:....:...............x..::...::..... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 22962939 NA +5603 chr4 + 190214555 54285811 54285810 54285969 159 TCCTGA-GTCATTTCT-TCCTTTTCCATGCAGTGTGTCCACCGTGATCTGGCTGCTCGCAACGTCCTCCTGGCACAAGGAAAAATTGTGAAGATCTGTGACTTTGGCCTGGCCAGAGACATCATGCATGATTCGAACTATGTGTCGAAAGGCAGTGTACGT chr4 + 94230402 12115081 12115080 12115241 12115081 12115080 12115241 161 TCCTGATGTTGCCTCTCTTCATTCCCTCACAGTGCATCCATCGGGATTTGGCAGCAAGGAACATCCTTCTTTCTGAGAACAACGTGGTGAAGATCTGTGACTTTGGGCTAGCCAGGGACATTTACAAAGACCCCGACTATGTACGGAAAGGAGATGTAAGT ......-..::::...-.:.x..:..x::.....::....:..x...:....x..xx.x...:....:..xx.xx.:::x..x:.x....................x..:.....:.....:xxxx.x..::.x:.......::x......x::....x.. 6M1I9M1I144M 107/159 67.3% 161/94230402 0.0% 2/159 1.3% 42170730 NA +6154 chr4 + 190214555 54287409 54287408 54287563 155 TGTCTCCCTCCTTCCTTGCAGACCTTTCTGCCCGTGAAGTGGATGGCTCCTGAGAGCATCTTTGACAACCTCTACACCACACTGAGTGATGTCTGGTCTTATGGCATTCTGCTCTGGGAGATCTTTTCCCTTGGTATGGGCCTGACATTGCTGCT chr4 + 94230402 12115326 12115325 12115477 12115326 12115325 12115477 152 TGTCTTCTGCGTTCTTAGGCAAGACTTCCACTC---AAATGGATGGCTCCAGAAGCAATTTTTGATAAGATCTACACAACACAGAGTGATGTCTGGTCTTTTGGAGTTCTGCTATGGGAAATATTTTCTCTAGGTAAGAACGTGGTTTTTTTTCT .....:.:x.x...:.x.xx:.xx:...::.:.---..:...........x..::xx..:.....:..xx.......x....x.................x...x:.......x.....:..x.....:..x....x.::.x..::x..x:.x.. 33M3D119M 107/152 70.4% 152/94230402 0.0% 3/152 2.0% 42172083 NA +3105 chr4 + 190214555 54304337 54304336 54304380 44 AAAACAACAACAACAAAAACAAACAAACAAACAAACAGAAAAAA chr4 + 94230402 12785742 12785741 12785785 12785742 12785741 12785785 44 AAAACAACAACAACAAAAAGAAACAAACAAAATAACAACAAAAA ...................x...........xx....:x..... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 41518595 NA +3555 chr4 + 190214555 54322388 54322387 54322524 137 TTTATGTGTTCCAGTATATATATACTGAAGTACATATTTATATGTTCCAGTATATATATATATGTATATATATACATATATATATACTGAAATATATATATGAAATTTATAAATTGTATTTATACATACATAAGGAA chr4 + 94230402 63642401 63642400 63642533 63642401 63642400 63642533 133 TTAATATCTTTTGGTAGATATGTGTCGGTGAGAAATACCGTATG---CATTATATACCTCTATACACATATCTCCATGTACATATATTAAAATATAGAGATAAAATTTGTATACT-TATTTACATTCAAAAAATGAA ..x..:.x..:::...x....:.:::.:x.x:x.xxx:::....---..x......:x.x...::.:....x.x...:..:.....:.:.......x.x..:......:..x.:.-......:.:x:.x.x..x... 44M3D68M1D21M 85/133 63.9% 133/94230402 0.0% 4/133 3.0% -9320013 -84910389 +3212 chr4 + 190214555 54354683 54354682 54354743 61 GTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCGCTTGAACCTGGAGG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:...........::........x.xxxx...x.:........::..:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -21678521 -72551881 +3174 chr4 + 190214555 54372679 54372678 54372761 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATTGCTTGAATCTGGGAGGGGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........:x.:........x.xx.x...x::......:.::.:..xxxx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -21660518 -72569884 +3316 chr4 + 190214555 54380743 54380742 54380827 85 CCCTAGCTCCTCTTTTCTTCCTTCCTTTCCTTCCCTC---------CCCTCTCTCCTTCCCTCCCTCTTT--CCTTCCCTCCCTCTCTCTTTCTGT chr4 + 94230402 18131233 18131232 18131328 18131233 18131232 18131328 96 CTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTAT .:..x....x.:.....x.:....::.....x..::.---------....:...:....x.......:::--..:..x.::.:.....:.:...:. 37M9I24M2I24M 60/85 70.6% 96/94230402 0.0% 11/85 12.9% 36249510 NA +3007 chr4 + 190214555 54383043 54383042 54383113 71 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAAAAGCAAATCTGTATAATTCTTTGAG chr4 + 94230402 36618474 36618473 36618544 36618474 36618473 36618544 71 CAAAACAAAACAAAAAAAAGAGGTCAGGAAGAGACAAGAGTAAGAAAAACAAATCAATATGAGCCTTTAAG .....x....x........:.::xx.::..:.:.x....:x:.:....:......x:...:.x:....:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 17764569 NA +4692 chr4 + 190214555 54389490 54389489 54389592 103 GACCTTGGGAAAATTACTTACCCTTCCTGTGCTTCAGTTTCCTCATTTGTAAAATGGAGATTAAAAATAGTCCCTACTTCATAGGGCTATTTGAACAATAAAT chr4 + 94230402 83501141 83501140 83501243 83501141 83501140 83501243 103 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAAT ...::....x..........x...x:x.....:.......:.:..::............x.x.x.:xx.x.x.....:...:....x....xx:.x:x..... 103M 74/103 71.8% 103/94230402 0.0% 0/103 0.0% -29111651 -65118751 +3294 chr4 + 190214555 54392180 54392179 54392233 54 AAAAAAAAAGAAAAAAAGAAAGAAACAAAGATTGGTGGGAAACACATTGCAGAA chr4 + 94230402 21376121 21376120 21376174 21376121 21376120 21376174 54 AAAAAAAAAGACAAAAAGAAAGAAATAAAATTTATTAGAAAACACACTGAAAAA ...........x.............:...:x..:x.:.:.......:..x.:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 33016059 NA +3025 chr4 + 190214555 54412953 54412952 54413005 53 CATGTCCTGGGGCTTTGTTCTTTTTTATTCTTTCAGTCTATTTTCTCTTTGTT chr4 + 94230402 44294952 44294951 44295004 44294952 44294951 44295004 53 CATTTCATGGGTTTTTGTTTTTTTTAATTCTTTTTGTCCGTCTTTTCTTTGTT ...x..x....x:......:.....x.......:x...::.:..:........ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 10118001 NA +3490 chr4 + 190214555 54432944 54432943 54433032 89 CACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGTTTGAGCCAAGGAGGTTAAGGCTGCAGGGAACCGTGATGGTGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA--GAAC----ATGATGCCA ...x......::..........::........x.xx.x...x:::....:..x..:..x..x:.....:.--....----...:..... 70M2D4M4D9M 62/83 74.7% 83/94230402 0.0% 6/83 7.2% -21600263 -72630139 +3583 chr4 + 190214555 54470359 54470358 54470431 73 TGCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAAGAGGATCACTTTAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:..........:::........x.xx.x.:.x.....x.:.....:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -21562846 -72667556 +3069 chr4 + 190214555 54474732 54474731 54474803 72 GCACCTGTAGTCCTAGCTACTTGGGGGATTGAGATGGGAGGATAACTTGAGCCCGGGAGGTTGAGGCTACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.:.........:::.::....x:xx.x.:.xx......:...:.:..x..x:....::.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -21558474 -72671928 +3317 chr4 + 190214555 54477535 54477534 54477579 45 GCTATTTTCCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847273 45847272 45847317 45847273 45847272 45847317 45 GCTGGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:x..x......x...........:.................. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 8630262 NA +3024 chr4 + 190214555 54477544 54477543 54477589 46 CTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 759689 759688 759734 759689 759688 759734 46 CTTTTTGCTCTCGCTCTTTTTCTTTCTTTTTTTTTTTCTTCAGAGA .....:x.....x........:...:...........:..:x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 53717855 NA +3387 chr4 + 190214555 54479666 54479665 54479725 60 GCCAGAGTTTATACACAGAATTTGGGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6553997 6553996 6554056 6553997 6553996 6554056 60 GCCATTGTATCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ....xx..x.xx.x.....x..xxx:.................................. 60M 49/60 81.7% 60/94230402 0.0% 0/60 0.0% 47925669 NA +3059 chr4 + 190214555 54479684 54479683 54479722 39 AATTTGGGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 26578259 26578258 26578297 26578259 26578258 26578297 39 AATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT ...:.::x............................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 27901425 NA +3084 chr4 + 190214555 54479695 54479694 54479727 33 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTG chr4 + 94230402 17384413 17384412 17384445 17384413 17384412 17384445 33 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTG ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 37095282 NA +3151 chr4 + 190214555 54484770 54484769 54484840 71 CTCAGTGAGAAAAGAAAGGAAGGAAATGAGGAAAGGAAGAAGGGAGGATGGAAGAAAGGAAGGAACAAAAG chr4 + 94230402 48231270 48231269 48231340 48231270 48231269 48231340 71 CTCAGTGAGGATGGGAAAAAATGCAGCAAGTCATGGGGGCAGGCAGGATAAAAGAAGGGAAGGAATGAAAG .........:.x:.:..::..x.x.:::..xx.x..::.x...x.....::.....:........::.... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 6253500 NA +3757 chr4 + 190214555 54488563 54488562 54488636 74 GTGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGAAGAATTACCTGAGCCAAGGAGGTTGAGACTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:............:........x.xx:x...x:..:...:..x..:..x..x:.:..::.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -21544641 -72685761 +3237 chr4 + 190214555 54509808 54509807 54509874 67 GAGATTCCATATCAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1494989 1494988 1495055 1494989 1494988 1495055 67 GAGATTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .......x:x:xx.x.:.........x.:......x........:.:..:...:.....x....::. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 53014819 NA +3165 chr4 + 190214555 54509812 54509811 54509879 68 TTCCATAT---CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472478 51472477 51472548 51472478 51472477 51472548 71 TTCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ......x.---....x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 8M3I60M 52/68 76.5% 71/94230402 0.0% 3/68 4.4% 3037334 NA +3009 chr4 + 190214555 54509820 54509819 54509872 53 CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:......x.x......:.:..:...:.....x....::. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 53014817 NA +3496 chr4 + 190214555 54509821 54509820 54509876 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 53014821 NA +3194 chr4 + 190214555 54509825 54509824 54509897 73 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAGGTACAGGTATAA chr4 + 94230402 51472490 51472489 51472562 51472490 51472489 51472562 73 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAA ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:....::.x.x.:..:x.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 3037335 NA +3427 chr4 + 190214555 54509828 54509827 54509895 68 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAGGTACAGGTAT chr4 + 94230402 85548420 85548419 85548486 85548420 85548419 85548486 67 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT-CAGACATGGATAT .............:.:x.....:...:.:.:.::...:..........x.....-:..::.::.:... 54M1D13M 50/67 74.6% 67/94230402 0.0% 1/67 1.5% -31038592 -63191810 +3214 chr4 + 190214555 54509830 54509829 54509882 53 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548420 85548419 85548472 85548420 85548419 85548472 53 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA .............:.xx.....:...:.:.:.::...:..........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -31038590 -63191812 +3149 chr4 + 190214555 54509832 54509831 54509900 69 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAGGTACAGGTATAAATA chr4 + 94230402 85548420 85548419 85548485 85548420 85548419 85548485 66 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT---CAGACATGGATA .............x.xx.....:...:.:.:.::...:..........x....x---...::..::... 54M3D12M 50/66 75.8% 66/94230402 0.0% 3/66 4.5% -31038588 -63191814 +3524 chr4 + 190214555 54526331 54526330 54526400 70 GGTGCACCTATAGTCCCAGCTACTTGGGTGGCTGAGGCAGGAGGATGGCTTGAGCCCAGGAGCTCAAGGC chr4 + 94230402 76033203 76033202 76033272 76033203 76033202 76033272 70 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC .......x.:....:...........::x.......x.xx.x.:.xx:.....:.....:....:x:... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -21506872 -72723530 +3096 chr4 + 190214555 54540431 54540430 54540500 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -21492766 -72737636 +3308 chr4 + 190214555 54562947 54562946 54563025 79 TCTGGTAAAAAAGAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAATACCCCCAAATACTTTCACCCTTAATTTTCAATTA chr4 + 94230402 43274046 43274045 43274124 43274046 43274045 43274124 79 TTTGGAAAAAAAGAAAAAGAAAAAAGAAACAACAACAATAAAAGCCCCACTAGCTTCTATCATCCATAGTTTTTATTCA .:...x............:..:.......x..x:.x..x....::x..x.:.:x.x..x...:..x..:....:.x.:. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 11288901 NA +3059 chr4 + 190214555 54602345 54602344 54602388 44 CCTATTCACCTTTATTTATTTATTTATTTATTTATTTATTTATT chr4 + 94230402 70829480 70829479 70829523 70829480 70829479 70829523 44 CCTGTTCACCTTTATATATTTATTTGTTCATTTATTGCTTTATT ...:...........x.........:..:.......xx...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -16227135 -78003267 +3036 chr4 + 190214555 54602350 54602349 54602429 80 TCACCTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTTTTTTTTTTGAGATAAAGTCTCACTCCTTTGCC chr4 + 94230402 22915677 22915676 22915756 22915677 22915676 22915756 80 TCACTGTCTTTTATTTATTTATCTACTTATTTCTGTATTAATAGCTTTGTCTTTTTAAGAGAAGAAGACTTTCCTCCACC ....:x.:x.............:..:......x.x....x..xx:...x.:.....:...x..::xxx.x:....:::.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 31686673 NA +3302 chr4 + 190214555 54613654 54613653 54613735 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:..:........x.xx.x...x::........::.:..xxxx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% -21419547 -72810855 +3094 chr4 + 190214555 54622496 54622495 54622608 113 CTCTCTCTTTCTTTCTTTTCTTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCT chr4 + 94230402 63697125 63697124 63697235 63697125 63697124 63697235 111 CTCTCCTTTCCGGTGTTTTCTCTTTTT--TTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .....::..:.xx.x......:...:.--...:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.:::.........:.:..:. 27M2D84M 67/111 60.4% 111/94230402 0.0% 2/111 1.8% -9074629 -85155773 +3899 chr4 + 190214555 54622498 54622497 54622610 113 CTCTCTTTCTTTCTTTTCT----TTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ..:.x..:..:..:....:----..........:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::...::........:.:.... 19M4I94M 73/113 64.6% 117/94230402 0.0% 4/113 3.5% -9074619 -85155783 +3164 chr4 + 190214555 54622502 54622501 54622610 109 CTTTCTTTCTTTTCTTT----TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCCTTCTTTCTTTCCTTCTTT chr4 + 94230402 63697117 63697116 63697232 63697117 63697116 63697232 116 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTT ....x..:..:.:....----.x:.:.:.....:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......-.:..:.....::..:....:.. 17M4I39M2I31M1I22M 73/109 67.0% 116/94230402 0.0% 7/109 6.4% -9074615 -85155787 +3040 chr4 + 190214555 54622507 54622506 54622582 76 TTTCTTTTCTTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 64726509 64726508 64726584 64726509 64726508 64726584 76 TTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ...x.x...:x........:....:x.xxxx.:...:....:..::.:x:........:.:..:...:.:.::... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -10104002 -84126400 +3113 chr4 + 190214555 54622518 54622517 54622615 98 TTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTGAAAT chr4 + 94230402 57372027 57372026 57372124 57372027 57372026 57372124 98 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGATAT ...:.....::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x:x..x..x..x.. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% -2749509 -91480893 +3075 chr4 + 190214555 54622521 54622520 54622603 83 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTC chr4 + 94230402 57372026 57372025 57372108 57372026 57372025 57372108 83 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTC ..:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -2749505 -91480897 +3597 chr4 + 190214555 54634387 54634386 54634465 79 GTGGCGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGAAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....--......:...........::........x:xx.x...x::...........:..x:xx:..:..x.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -21398814 -72831588 +3477 chr4 + 190214555 54636231 54636230 54636298 68 AAGAAGTAGCCTTCTTTTTATTTATTTATTTAATTTTTATTCTTGGTTTTTTTGTTGTTGTTGTTTTT chr4 + 94230402 63738470 63738469 63738537 63738470 63738469 63738537 68 AGGAAATAGTCTTTGCATTATAATTTTTCACAATTATTATTCTTGGCTTTTTTGTTGTTGTTGCTTTT .:...:...:...:x:x....xxx...x:x:....x..........:................:.... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% -9102239 -85128163 +3794 chr4 + 190214555 54687307 54687306 54687380 74 GTGCCCCTGTAATCCCAGCTACTTGAGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGCTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:.:............:........x:xx.x...x::...........:..x:xx:........ 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -21345897 -72884505 +3028 chr4 + 190214555 54711794 54711793 54711846 53 GTGCGTGTAATCCCAGCTAGTTGGGAGGCTGAGGCAGGAGAATCACTTGAACC chr4 + 94230402 76033206 76033205 76033258 76033206 76033205 76033258 53 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC .::......:.:.......x...::........x.xx.x...x.......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -21321412 -72908990 +3949 chr4 + 190214555 54722789 54722788 54722921 133 GAATATATTCAG-ATTTATA-TATATATTTATATATATATATGTATTTATATATATTTATATATATTTTTATATATATGTATATATATTTATATATATGTATTTATATATATATATTCACGTTCATAATATACAT chr4 + 94230402 71715493 71715492 71715626 71715493 71715492 71715626 134 gaatatacacaatatatataatatatatatatTCATGCATATGTACTTGCAAACATTTGTACATATCTTTGTGTTTGTGTATACATAGATACATAAAAG-AACCATGAATTGATCTTTAAATTCGAAATTAACAT .......:x..:-..x....-.......x...x:..::.......:..::.x.:....:..:....:...:.:.x.:......:...xx..:...x.x.-.x::..:x..xx..x..:.x:...:x...xx.... 12M1I7M1I78M1D35M 90/132 68.2% 134/94230402 0.0% 3/132 2.3% -16992704 -77237698 +3047 chr4 + 190214555 54722810 54722809 54722863 54 TATATTTATATATATATATGTATTTATATATATTTATATATATTTTTATATATA chr4 + 94230402 77957772 77957771 77957825 77957772 77957771 77957825 54 TATGCTTATTTTTATGTATGTGTTTATATATATGTATGTAAAGTATTATATATA ...::....x.x...:.....:...........x...:..x.x.x......... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -23234962 -70995440 +3522 chr4 + 190214555 54724815 54724814 54724896 82 TGGGTCGCATTCAAAGCCGTCCTGGGCCACATGTGGGCTGCAGGTTGGATAAGCTTGTTCTAGTGGGTAGAAACACATAATA chr4 + 94230402 13446341 13446340 13446419 13446341 13446340 13446419 79 TGGGCTGCATTGCCAGCTGTGCTGAGCCACATGCAGGCTGCAGGTTGGATGTGCCTGACTTAGC---TAGAGAGATGCGATA ....::.....xxx...:..x...:........::...............:x..:..x::...:---....:.x.::::... 64M3D15M 56/79 70.9% 79/94230402 0.0% 3/79 3.8% 41278474 NA +4547 chr4 + 190214555 54727966 54727965 54728113 148 TTTGCCAGTTGTGCTTTTTGCTAAAATGCATGTTTCCAATTTTAGCGAGTGCCCATTTGACAG--AACGGGAAGCCCTCATGTCTGAACTCAAAGTCCTGAGTTACCTTGGTAATCACATGAATATTGTGAATCTACTTGGAGCCTGCAC chr4 + 94230402 67070678 67070677 67070823 67070678 67070677 67070823 146 TCTGTCTGTGATGCTCCTGACT----TGTATTGTTTTACTTCTGCAGAGGGTGCAACTCACAGTGAGCACAGAGCACTTATGTCCGAGCTGAAGATCCTCATTCACATTGGTCATCATCTCAACGTTGTCAATTTACTTGGAGCCTGCAC .:..:.x..x:....::.x:..----..:..xx..::.x..:.:xx...x.:x..x:.x....--.:.:x::...x..:.....:..:..x..::....x.x.:..x.....x....:x.x..::....x...:................ 22M4D37M2I85M 95/144 66.0% 146/94230402 0.0% 6/144 4.2% -12342712 -81887690 +3043 chr4 + 190214555 54732030 54732029 54732079 50 TGTTTTGTTTTTTTGATTTTTTTTTTTTTTTTTTTTTTTTTGAGAACAGA chr4 + 94230402 58326777 58326776 58326826 58326777 58326776 58326826 50 TGTTAGGTTGTTTTGGTTTGTTTTCTTTTTTTTTTTCTTCTGAGGACAAA ....xx...x.....:...x....:...........:..:....:...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -3594747 -90635655 +5872 chr4 + 190214555 54733043 54733042 54733198 156 GTTTTCTTTTCTCCTCCAACCTAATAGTGTATTCACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCCAGAGACATCAAGAATGATTCTAATTATGTGGTTAAAGGAAACGTGAGT chr4 + 94230402 12115088 12115087 12115241 12115088 12115087 12115241 154 GTTGCCTCTCTTCATTC--CCTCACAGTGCATCCATCGGGATTTGGCAGCAAGGAACATCCTTCTTTCTGAGAACAACGTGGTGAAGATCTGTGACTTTGGGCTAGCCAGGGACATTTACAAAGACCCCGACTATGTACGGAAAGGAGATGTAAGT ...x:..:.::..x.:.--...x.:....:..:..:x.:..:........x..:..:.....:...x..x.x:::x:x:.x:::.....:.....:.....x........:.....:x.x..x..::.::.:.....:xxx......:.:..:... 17M2D137M 101/154 65.6% 154/94230402 0.0% 2/154 1.3% 42617955 NA +5657 chr4 + 190214555 54736492 54736491 54736613 122 TTACAGGCTCGACTACCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGTGTATACACGTTTGAAAGTGACGTCTGGTCCTATGGGATTTTTCTTTGGGAGCTGTTCTCTTTAGGTAA chr4 + 94230402 67077145 67077144 67077266 67077145 67077144 67077266 122 TTTCAGGCTAGGCTACCGCTAAAATGGATGGCACCAGAAACCATTTTTGATAGAGTATATACCATTCAGAGTGATGTGTGGTCATTTGGAGTTCTGCTGTGGGAAATATTTTCATTAGGTGA ..x......x.:.....xx.:..:...........x....x......::.:x.x.....:..xx..x.:.....:..x.....x.x...::..:.x..x.....:x.:..:..x......:. 122M 88/122 72.1% 122/94230402 0.0% 0/122 0.0% -12340653 -81889749 +3063 chr4 + 190214555 54749126 54749125 54749189 64 ATATATATGTTATATATATACATATATATGTTATATATATACACACACATATATATGCAACTAA chr4 + 94230402 62847863 62847862 62847926 62847863 62847862 62847926 64 ATACATATGTTAGATATATACACACAAAAATAGTATGGATACATACAGACACACATTCAACCAA ...:........x.........:.:.x.x:.x:...:x.....:...x.:.:.:..x....:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -8098737 -86131665 +3416 chr4 + 190214555 54765828 54765827 54765979 152 TTTTTAATATTTGCCTTGTTTGCT----TTCTATTTGTGCTTTCTCTCTCTCTCTATATATATACATATGTGTATATATATATATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATATACCCACAAATACACATG chr4 + 94230402 85834489 85834488 85834616 85834489 85834488 85834616 128 TTATTAATACCTACCTTATTTGCCAGAATGTAGTTTGGGTTTTTT----------------ATTCATTTGTGTCTGTGTGTGTGT------------GTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x......::.:....:.....:----.x:x:....x.:...:.----------------..x...x.....x.:.:.:.:.:.------------....:...xx..:..x::.:........:x...:..:.x...:.x....x.:....... 24M4I17M16D24M12D59M 86/124 69.4% 128/94230402 0.0% 32/124 25.8% -31068661 -63161741 +3168 chr4 + 190214555 54765879 54765878 54765991 113 ATATATATACATATGTGTATATATATATATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATATACCCA-----CAAATACACATGTACATATATATA chr4 + 94230402 89812969 89812968 89813086 89812969 89812968 89813086 118 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA .....x...x............x..x..::x.xx.:....:..::x.:x:x:..:::...::x.x.:.....:.:.:.......::.:.-----...:.x:x:...x...x::..:.. 89M5I24M 70/113 61.9% 118/94230402 0.0% 5/113 4.4% -35047090 -59183312 +3562 chr4 + 190214555 54765928 54765927 54766026 99 TATATATATATACACATATGTGTATATATATATATACCCACAAATACACATGTACATATATATATACCCACACATACACATATATACATGTATGTATAT chr4 + 94230402 21109194 21109193 21109292 21109194 21109193 21109292 99 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATAT ....:..:.:.::x:x.:..x.::...x.....:...:....x....x.:.....x....::...::x.x..:::x:x::.:....::......x.... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 33656734 NA +3018 chr4 + 190214555 54768358 54768357 54768458 101 ATGTATTCTACAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTCAATGTATCTATTTATACATTTATTTATATCTATTTATAT chr4 + 94230402 85834516 85834515 85834615 85834516 85834515 85834615 100 ATGTAGTTTG-GGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.:.:-:...x.x.:.x::.x.....x.................:.xx:......:xx.::...x..xx..:.::.....x:.:.:x..:x:.:.. 10M1D90M 64/100 64.0% 100/94230402 0.0% 1/100 1.0% -31066158 -63164244 +9784 chr4 + 190214555 54793859 54793858 54794193 335 TTTGGGTTGGAAGTC-----AATTCCATAAAATCTGCACTTACTAAAACCTTTTCTCTGAAAATGTACTAATAATATATAGCTAGAACTTGCAGACAATGTCATCATTGTTATGGAGATT-TGTAGCCAAAATATTCTATTTTGTAGAGGTTTTGTTATTGCCCAGTGATGACATTTTTTGGACAATTTTTAAGAGAGGCAGATGTTCATCTATTTGCTGGTTTTTCCTAGCTTACAAAGCCAACAATGATTTAGACCCAAATTGCTTTTGATCTTCC-------CAAGTACCTCATTTTTATTATTAAGGGACTTACAGTACAAACGATCTGTCATTTGAGCAGGAA chr4 + 94230402 67129321 67129320 67129655 67129321 67129320 67129655 335 TTTGGGCTTCAAGTATCATAAAAGCCAGAAAAACTGCATTTACTAAAACCTTTTCTCTGAAAATGTATTAATAATGTATGATCATGCTTTGTAGATAATGCAATAATTGCTTGCTTGATTATGTAGCCAAAATAATCATTTTCAGAGATGTTTGATTTTTGCACGGTGTCTACA--TTTTGTATAATTTTC-AGGGCAGCAGATGCTCGTCTGTTTG--------TTCTGGTTCA-AAAGCCATCTCTAAATTGAAAGTGAATTACTGTAAACCTTCCAGGTTTACAGGTATCTAA-TTTTACTTTAGAAACACACGCAGTCCAAATGGTCTTATACTCAGGAGGGGA ......:.xx....x-----..xx...x....x.....:............................:.......:...::::.x:x:...:...:....:x..x....:.xxxxx....-.............x..xx...::x...x....x:..x....x.:...x:x...--.....x.:......:-..:.x:.......:..:...:....--------.:..:.:.:.-.......x.xx.:.x..::.xx::....:..x.x:.:.....-------..:...:..x.-.....:.x.x:.::x..x::....x....:.:...xx:.:.:::.x:..:. 15M5I100M1I53M2D15M1D25M8D10M1D42M7I11M1D51M 222/322 68.9% 335/94230402 0.0% 26/322 8.1% -12335462 -81894940 +3319 chr4 + 190214555 54804103 54804102 54804170 68 TGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCATGCATGTGCACATGTATTTTTCTG chr4 + 94230402 85834533 85834532 85834600 85834533 85834532 85834600 68 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG .:..::.x.....x.................:.xx:...:x....:...:..:.x..::..x...x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -31030430 -63199972 +3109 chr4 + 190214555 54804110 54804109 54804162 53 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCATGCATGTGCACATGTA chr4 + 94230402 79265519 79265518 79265571 79265519 79265518 79265571 53 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCA .............::........xx...:.:.:.::.::.:........:.:. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -24461409 -69768993 +4160 chr4 + 190214555 54806102 54806101 54806233 132 AGAAAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGAAAGGGGG----AGGGAGAGAGGAAAAAGGGAAG--GAAGGGAAAGGGA chr4 + 94230402 8397450 8397449 8397586 8397450 8397449 8397586 137 AGATAGAGCCAGAAGGAAGTGAG-AGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGA ...x.:..xx.........x:..-.:.......x.:.:x.:.:...:.x...x..:.x....:x:.x..:..:...x.::.x.x:.....x:x....----.:.:..xx...........:..--......x..::.. 23M1D73M4I22M2I13M 90/131 68.7% 137/94230402 0.0% 7/131 5.3% 46408652 NA +4333 chr4 + 190214555 54806213 54806212 54806430 218 AAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAA---AGAAAGAAAGAAGAAGGAAAGAAA---GAAAGAAAAAAGAAAGAGAAAGAAAG chr4 + 94230402 1317349 1317348 1317567 1317349 1317348 1317567 219 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAA--ATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGT---GGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAG .::.x.::..:x:..:...x.x:x..:xx...:.x.:....:..xxxx..:.x:.x..:.x:::.xx.::.:.....:.....:......:.:.....--.:..xx.:..x...:::x:....x.:.xx:............:..:..:x:x.:.x---......:..---:..xxx.:.:.:.....:x..xx.---...x.:....:..:..xx..:..:.. 98M2D56M3D9M3I24M3I26M 128/213 60.1% 219/94230402 0.0% 11/213 5.2% 53488864 NA +3950 chr4 + 190214555 54806246 54806245 54806485 240 AAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAA-----------AGGGGGAG----------GGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAG chr4 + 94230402 8397332 8397331 8397587 8397332 8397331 8397587 256 AACGAGAATAAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCA-----GAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAG ..x:....x:.:.....::x:.x.:x.x:.x...x:x:.::.......:.x:.......:.x...x::...:..:xx.:xxx.x.::..-----------...:.:..----------:..x:...xx.-----........x..:..:......x.:.:x.:.::.:..x.:.x:::.x:.:..x..:.:....:.:x..::x.x:..:..x.x::..x....:..::xx:...:::......:x.:::::.x..:.:.. 89M11I8M10I11M5D127M 132/235 56.2% 256/94230402 0.0% 26/235 11.1% 46408914 NA +4087 chr4 + 190214555 54806321 54806320 54806475 155 AAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGA chr4 + 94230402 49044660 49044659 49044813 49044660 49044659 49044813 154 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGA-CTAGGAAGAGGGAAAATGA ......::..::.x.:.:.:xx:.:..x:.xx.:..:.:x.:.x..x..:.:.x.xx:.:x..:.:.::.....:xx..........::..::x::...:x........:...:...x....x:::..:xx....-xx...:..:..:....x.. 135M1D19M 91/154 59.1% 154/94230402 0.0% 1/154 0.6% 5761661 NA +3640 chr4 + 190214555 54806357 54806356 54806499 143 GGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGAGAAGGAGAGA-GGGAGGGAGGGGAAAAAGGAAG--GAAGAAAGGAAGGAAAGGGAAG chr4 + 94230402 14577289 14577288 14577433 14577289 14577288 14577433 145 GGGATGTGAGATAAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGAG-TAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGACAGCTAAGGAAGGGTAAGGGTGTGAAG ....x.x:..:x...:.....:x:...::..x.:....:.:.:...:.:.x:.::..xx.......-x..:x....::.....::x.:::....x....-.:.xx:...xx...:...:x..--:.:...:..x.:.::x.x.... 66M1D32M1I22M2I22M 88/142 62.0% 145/94230402 0.0% 4/142 2.8% 40229068 NA +3066 chr4 + 190214555 54806358 54806357 54806440 83 GGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGA-AAGAGAAAGAAAGGAAGGAAGGA chr4 + 94230402 75241504 75241503 75241586 75241504 75241503 75241586 83 GGTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGG-AAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ..x..:x...:..x:....xx.x...x........:....-..........:...x.:..-x........x..::x.x:.:... 40M1D19M1I23M 60/82 73.2% 83/94230402 0.0% 2/82 2.4% -20435146 -73795256 +3073 chr4 + 190214555 54806406 54806405 54806478 73 AAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGG chr4 + 94230402 73744717 73744716 73744789 73744717 73744716 73744789 73 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ....:..........:.....:::::.::...::::..:.:.:..:.:.:.x.:..x.....x::..:.x.:. 73M 45/73 61.6% 73/94230402 0.0% 0/73 0.0% -18938311 -75292091 +3734 chr4 + 190214555 54806413 54806412 54806515 103 AAAGAA----AGAGAAAGAAAGGAAGGAAGGAAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAA chr4 + 94230402 75729439 75729438 75729543 75729439 75729438 75729543 105 AAAGAACCTTAGAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGGAGAATTAAATGGGAGCAAGCTA--AAGGCAGGGGGACAGAATCAAAAGGAGAA ......----.....:.x...:x........::.:..:...::.:.....:.....::xx...x..:..x...xx.--....x.:...:.x....xx...:::.... 6M4I66M2D29M 71/101 70.3% 105/94230402 0.0% 6/101 5.9% -20923026 -73307376 +3163 chr4 + 190214555 54806429 54806428 54806533 105 AGGAAGGAAGGAAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAA chr4 + 94230402 11857966 11857965 11858070 11857966 11857965 11858070 105 AGGGAGGGAGGACTGGATCAGAGGACAAGGTGAAGTGGAAACTTTTAAGAGAGATGTGTAAAGCAAGGAAAAGGAAGAACGGCAAAAGAAAGAAGTAGAGAGAAA ...:...:....xx...xx..::..x.:..x.:::x..:..xxxxx...::...x:x.x.:::x.:....:..:.....x.:x.:.........:x...:..... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 42948463 NA +3281 chr4 + 190214555 54806440 54806439 54806538 99 AAGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGA------------------AAGAGAAAGAAAAAAAG chr4 + 94230402 84536568 84536567 84536684 84536568 84536567 84536684 117 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAG ......:.:...:...:::.::x.:x::...x......x:.::..::....:..:..:....:.....:xx.x.x..x..:.------------------..........x...x.. 82M18I17M 66/99 66.7% 117/94230402 0.0% 18/99 18.2% -29730128 -64500274 +3057 chr4 + 190214555 54806454 54806453 54806501 48 GAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAGGAAGGAAAGGGAAGAG chr4 + 94230402 73633586 73633585 73633633 73633586 73633585 73633633 48 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAG .:...:........:..........:.:...::..::...:::..... 48M 36/48 75.0% 48/94230402 0.0% 0/48 0.0% -18827132 -75403270 +3036 chr4 + 190214555 54806475 54806474 54806542 68 AAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAAGTTGC chr4 + 94230402 39594992 39594991 39595059 39594992 39594991 39595059 68 AAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGATTGC .....::....:..xxx.....:....:::::::.:x:::.:...:.....:..........::.... 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 15211483 NA +4684 chr4 + 190214555 54848721 54848720 54848811 91 ACTTTGAACATGTTACTTAATTTCTCTGTGCTTCAGTTTTTTCACCTGTAAAATAGGGGTAATAAC-ACTATCTACCTCATGGGGTTGTTGT chr4 + 94230402 83501142 83501141 83501233 83501142 83501141 83501233 92 ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGT ...:..::..x:........::.x.x.....:........::............:.:.x.:...::-.:..:........::...x.:.... 66M1I25M 67/91 73.6% 92/94230402 0.0% 1/91 1.1% -28652421 -65577981 +3791 chr4 + 190214555 54928444 54928443 54928530 87 GGCAAGTCATTTAATTTCTTTATGCCTCAATTTCTCCATCTGTAAAATGGGGATGTTAACCA-TATCTACCTCATAGTCTTGTTATAA chr4 + 94230402 83501148 83501147 83501235 83501148 83501147 83501235 88 GGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA .....:.:.:....::.x.x.:.......:...::...:...........:.x..x..::x.-..:........:..xxx.:..:.:. 62M1I25M 61/87 70.1% 88/94230402 0.0% 1/87 1.1% -28572704 -65657698 +3096 chr4 + 190214555 54942594 54942593 54942663 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -21090603 -73139799 +3091 chr4 + 190214555 54942738 54942737 54942775 38 AAAAAAAAAAAAAACAAAACAAAACAAAAAAACAGCTG chr4 + 94230402 28471181 28471180 28471218 28471181 28471180 28471218 38 AAAAAAACAAAAAACAAAACAAAACAAAAAAACACCTG .......x..........................x... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 26471557 NA +3035 chr4 + 190214555 54954208 54954207 54954256 49 TGGTTTTTTTTTTTTTTGGTTTTGTTTTTTGTTTTTTTTTTTAACTCTT chr4 + 94230402 8340407 8340406 8340455 8340407 8340406 8340455 49 TGGTTTTTTTTTTTTGTTGTTTTGTTTTCTGTTTTTCCTTCTGGTTATT ...............x.x..........:.......::..:.:::.x.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 46613801 NA +3014 chr4 + 190214555 54954691 54954690 54954756 66 AGAATCATAGTCCTTATGGCAAAAAAAAAAAAAAAAAAAAAACAGAACAAAAACAAAAACAAAAAA chr4 + 94230402 48367431 48367430 48367496 48367431 48367430 48367496 66 AGAATAGAAGTCTATATGAGGGGAAAAAAGAAACAAACAAACCCAAACAAAAAAAACAACAAAAAA .....x:x....:x....:x:::......:...x...x...x.x:........x..x......... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 6587260 NA +3659 chr4 + 190214555 54987970 54987969 54988052 83 CATGGTGGCGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAGGAATCGCTTGAACCCGGGAAGCATAGGCTTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:....:--....:.:...........::........x.x::x...x.:.........:.:.:x:x.:....x:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -21045227 -73185175 +3677 chr4 + 190214555 55054234 55054233 55054333 100 CATAGTGGCACATGCCTGTAGCACTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG---------GCAGAAGTTGCAGCGAGCCAAGAATGTGCC chr4 + 94230402 76033197 76033196 76033303 76033197 76033196 76033303 107 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCC ..:.....::..:.--.....:x.:.........::........x.xx.x...x.............:..---------.:....xx..xx..x.:x..::x:...... 14M2D54M9I30M 71/98 72.4% 107/94230402 0.0% 11/98 11.2% -20978963 -73251439 +3627 chr4 + 190214555 55062827 55062826 55062899 73 TGCACCTGTGGTCCCAGTTACTTGGAAGCCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:....:......:...x.....x.xx.x.:.x::.....:.....:..:..x:....::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -20970378 -73260024 +3039 chr4 + 190214555 55067070 55067069 55067138 69 TCTCAAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTT chr4 + 94230402 66421019 66421018 66421087 66421019 66421018 66421087 69 TTTCTAAATTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTCCTGGTTT .:..x.:.....x.:.::....:......x...........x...::x.:..:.::...:.::.xx... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -11353949 -82876453 +3073 chr4 + 190214555 55067074 55067073 55067175 102 AAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 7136607 7136606 7136708 7136607 7136606 7136708 102 AAGCATTGATTACATTTTACCCTTTTTTTCTATTTTAGTTATCCATATGCATTTCTGTCTCTAAACTCCAATTTCTTTTCCGTTTTTTTTTTTTTTTTTGAG ...xx..x.:.x.x....x.::...:.....x:...xx..x.:.x.x.x.x...:.x.:.:.xxx:.::xx...:....::x.................... 102M 66/102 64.7% 102/94230402 0.0% 0/102 0.0% 47930467 NA +3196 chr4 + 190214555 55067079 55067078 55067189 111 TTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTC chr4 + 94230402 79895987 79895986 79896091 79895987 79895986 79896091 105 TTTAGTTCAACCTTTGCTTTTGTTCTTCTGCTCTTTAACCTTTCCTAGTGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTT------TGGCTTTTCATTC ....x...xx::..:x:...:x.......x:.....xx.:...:..xx.x...x..x...xx..xx..xx..xx..................------...xx.....:.. 92M6D13M 73/105 69.5% 105/94230402 0.0% 6/105 5.7% -24828908 -69401494 +3390 chr4 + 190214555 55067084 55067083 55067178 95 TTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 + 94230402 15335359 15335358 15335453 15335359 15335358 15335453 95 TTCTGTTTTCACTTCGTACTCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTTATTACTGATGCCTTTTCTGTGGAATG ....x.....x:..:x.x:::.........::..:.::.....:.x.x:.......x...x...x....x..x:.xx.x::....:.x..::... 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 39731725 NA +3245 chr4 + 190214555 55067086 55067085 55067188 103 CTTTTTTCTTTTTCTTTCTTCTTTT--------------CTTTTTCTTTTTCTTTTTTTTTTTTTT------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACT chr4 + 94230402 90152560 90152559 90152682 90152560 90152559 90152682 123 CTTTTTACTTTCCCTGATTCCTTTTGCCCCCCAAGTAGGTTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ......x....::..xx:.:.....--------------:...::.xx::...x..:::.:..:..------..:..::....:.::...::.x.............x...x.:.:....... 25M14I27M6I51M 70/103 68.0% 123/94230402 0.0% 20/103 19.4% -35085474 -59144928 +3075 chr4 + 190214555 55067089 55067088 55067167 79 TTTTCTTTTTCTTTC--TTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 48601704 48601703 48601784 48601704 48601703 48601784 81 TTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCT .......:x..:..:--.....::xx..:........::...x...xxxx.x:...:..........::.x........:. 15M2I64M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 6465385 NA +3817 chr4 + 190214555 55067089 55067088 55067172 84 TTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTT-------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34734819 34734818 34734909 34734819 34734818 34734909 91 TTTTCCTTCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTTT .....:..:...:...:.....xx...:........::xx..x....-------...........x:........::::.x.:...x.... 47M7I37M 63/84 75.0% 91/94230402 0.0% 7/84 8.3% 20332270 NA +3261 chr4 + 190214555 55067095 55067094 55067171 77 TTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 48601704 48601703 48601784 48601704 48601703 48601784 81 TTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCT .......:x.:....xx..:...:xx....:.....:::...x...----.x:...:..........::.x........:. 46M4I31M 56/77 72.7% 81/94230402 0.0% 4/77 5.2% 6465391 NA +3003 chr4 + 190214555 55067100 55067099 55067163 64 TTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63257034 63257033 63257097 63257034 63257033 63257097 64 TTTCTTCCATTCTTTTCAGTGCTCCATTTTTTTCTTTTTTTCTTTTTTTAGTCTTTTTAGCTTT .......:x.......:xx.x:..:x.......:.......:.......xx.:.....xx:... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -8189934 -86040468 +3416 chr4 + 190214555 55088897 55088896 55088979 83 CCAAATGTTCCACCAACTCTGAAAACGTGGGTCTCTGACTGGGCTCCCCGTGCCAGCAGTCCAGCATGGTCTGGTACCTAGAG chr4 + 94230402 86426331 86426330 86426413 86426331 86426330 86426413 83 CCAGGTCTTCCACCAGCTGCTTGAATGTGGGTCGCTGCGAGGGGACAGCGTGCCAGCACTCCCGCATGATCATGTACCTACAG ...::.x........:..x:xx:..:.......x...xxx...xx.xx..........x...x.....:..xx.......x.. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% -31337434 -62892968 +6150 chr4 + 190214555 55089685 55089684 55089795 111 ACTTACCTAAGGAAAATATTTCCCACAGCAAAACACCAAAAGACCAGACGTCACTCTGGATTGTGTACACTCTGTCAAAAATTGTTTCTGGGGCCATCCATTTCAAAGGGA chr4 + 94230402 67144889 67144888 67144999 67144889 67144888 67144999 111 ACTTACCTAAGGAGAAGAGTTCCCAAAGCAATATTCCATAAGACCAGACATCACTCTCGAAGGTGTAAACGCAGTTGAAAATGCTTTCAGGTGCCATCCACTTCACAGGGA .............:..x.x......x.....x.:x...x..........:.......x..xx.....x..x.x..::.....xx....x..x........:....x..... 111M 88/111 79.3% 111/94230402 0.0% 0/111 0.0% -12055204 -82175198 +6944 chr4 + 190214555 55089685 55089684 55089867 183 ACTTACCTAAGGAAAATATTTCCCACAGCAAAACACCAAAAGACCAGACGTCACTCTGGATTGTGTACACTCTGTCAAAAATTGTTTCTGGGGCCATCCATTTCAAAGGGAGGCGAGCCTACAGGGGTAGAAGACAAGGATTCAGAACC---CAAATTAGCAAATATCTGAAGAAAAAAACTTCCT chr4 + 94230402 67275605 67275604 67275782 67275605 67275604 67275782 178 ACATACCAAGAGAAAATATTTCCCACAGCAGAATGCCATAAGACCAGACATCACTTAATGTTGTGTACAGATTGTCAAAAATGCTTTCAGGTGCCATCCATTTTACTGGGAGGAAGGTCTGTAGCAGAAAGAAATAA--ACCCCAAACCACATAGATTAGTCATT------AAAGAAATGCTTCCT ..x....x.::...................:..::...x..........:.....:x:x:.........xx:..........xx....x..x...........:.xx......x::.:..::..x:.x.::.:.:..--.::.x:....---:.:.....:x.x.------.:.:...x:...... 137M2D10M3I13M6D15M 125/175 71.4% 178/94230402 0.0% 11/175 6.3% -12185920 -82044482 +3837 chr4 + 190214555 55089732 55089731 55089804 73 ACGTCACTCTGGATTGTGTACACTCTGTCAAAAATTGTTTCTGGGGCCATCCATTTCAAAGGGAGGCGAGCCT chr4 + 94230402 86429184 86429183 86429256 86429184 86429183 86429256 73 ACATCGCTCTGGTGAGTATAGACCCGGTCAAACAATGCTTCTGGAGCCATCCATTTCACAGGCAGCCGACCCT ..:..:......xxx..:..x..:.x......x.x..:......:.............x...x..x...x... 73M 56/73 76.7% 73/94230402 0.0% 0/73 0.0% -31339452 -62890950 +4480 chr4 + 190214555 55089950 55089949 55090089 140 ACTTACATCTCCTTTTCTGACATAATCTGGATCTTTATAAATATCCCGGGCCAAGCCAAAGTCACAGATTTTAACCACGTTCTTCTCCGATAAGAGGATATTTCGTGCCGCCAGGTCCCTGTGGATACACTGCAAAGAGA chr4 + 94230402 67276308 67276307 67276447 67276308 67276307 67276447 140 ACATACGCTGCCCTTGGAGACATAGTTGGAATCATGCATGATGTCTCTAGCCAACCCAAAGTCGCAGATCTTCACGATTTTGCCTTGAGCCAGAAGGACATTACGAGCTGCCAAGTCACGGTGTACGCACTGCATGGAGA ..x...:::x..:..xxx......:.:x.:...x.xxxx:..:..:.x:.....x........:.....:..x..x.:x..x:::.xx.x:.::....:...x..x..:....:...x.x...x.::.......x:.... 140M 88/140 62.9% 140/94230402 0.0% 0/140 0.0% -12186358 -82044044 +4462 chr4 + 190214555 55096228 55096227 55096338 111 CCTCCTGGCTTGGTACAGGCACCTAGAAGGTTGACCACATTGAGATGGTGACCAATATGAATGAGGATCTTGAGTTCAGACATGAGAGCTCGATGCTCACTGTGTGTTGCT chr4 + 94230402 67280157 67280156 67280267 67280157 67280156 67280267 111 CCACCTGATTTCGTACAAGCTCCAAGCAGGTTCACAATATTCAGGTGGGGCCCAAGATGTGTCATTATCTTCAGTTCAGACATGAGCGCCTGTTTTTCGCTGGATCTAGCT ..x....::..x.....:..x..x..x.....x..x.:...x..:...x.x....x...x:.x.xx.....x..............x..::.x.x:..:...x:.x.x... 111M 78/111 70.3% 111/94230402 0.0% 0/111 0.0% -12183929 -82046473 +3121 chr4 + 190214555 55096238 55096237 55096317 80 TGGTACAGGCACCTAGAAGGTTGACCACATTGAGATGGTGACCAATATGAATGAGGATCTTGAGTTCAGACATGAGAGCT chr4 + 94230402 67154731 67154730 67154810 67154731 67154730 67154810 80 TAGTGCAAGCTCCAAGTAGATTCACAATATTAATGTGGTTACCAAGGTAACTGAGAACTTTTAGCTCTGACATCAAGGCT .:..:..:..x..x..x..:..x..x.:...:.x:....x.....x:.:.x....:.::..x..:..x.....x.::... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -12058493 -82171909 +3094 chr4 + 190214555 55115583 55115582 55115646 64 TGTGTGTGTATGTGTGTGTGTGTGTTTGTGCATGCACATGCATGTGTATATATCTGTGTGTATA chr4 + 94230402 85834541 85834540 85834604 85834541 85834540 85834604 64 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA .....x...:.............:..x:..:.x...:.:::....:x...:..x.x.:..:.:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -30718958 -63511444 +3090 chr4 + 190214555 55120266 55120265 55120312 47 AGCACTCTTCCAGGAGGGTAACATCACCTCCACTTGTCACAGTCTCT chr4 + 94230402 11237924 11237923 11237970 11237924 11237923 11237970 47 AACACCCTTCCAGGAGGGTTACATCACCTTCAGCTGCCACATTCCCT .:...:.............x.........:..x:..:....x..:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 43882342 NA +3480 chr4 + 190214555 55146992 55146991 55147171 180 CTTTAGTGTG-GAAGAAGAGAAAAAAAAACAAGGAAGGAAGGAAGCAAGGAAGGAAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGAAGGGTGATA-------GATAGATGATGGACAATACATAAATGACAGGTAGGTAGGTGGATGAATAGACGATGGATGGATGGATGGATGGATGGATGGATGG chr4 + 94230402 1500689 1500688 1500864 1500689 1500688 1500864 176 CTTCTGTATGTGGGGAAGAGAAGAAA-------GGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatgga-aaaaaaaaagaaagaaaatgga--aatagaagaggaaaaaaggg--ggggggaggagaggaagg ...:x..:..-.::........:...-------.:x..::.....x.:x..:..:.:.....:.::..:x.:.::.:....:..x:::........-------:...:.x..x...x...:x.-...x:.x.:.x.:.x.::....--......x..x.:.x::.x..--..:x...x.::x...x.. 10M1I15M7D63M7I20M1D22M2D20M2D18M 108/168 64.3% 176/94230402 0.0% 20/168 11.9% 53646303 NA +3584 chr4 + 190214555 55151444 55151443 55151509 66 TTTGCCCAGTGTTTTTTTTTTTGGTTTTTTTGTTTGTTTGTTTGTTTTAGTAGTTTCGTAGTTTCT chr4 + 94230402 90372327 90372326 90372392 90372327 90372326 90372392 66 TTGGTCAAGTATTTCTATTTCTGTTGTTTTTGTTTGTTTGTTTGTTTTAATAGCATCATATTTACT ..x.:.x...:...:.x...:..x.x.......................:...:x..:..x..x.. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% -35220883 -59009519 +3118 chr4 + 190214555 55151455 55151454 55151499 45 TTTTTTTTTTTGGTTTTTTTGTTTGTTTGTTTGTTTT--AGTAGTTT chr4 + 94230402 18559154 18559153 18559200 18559154 18559153 18559200 47 TTTTTTTTTTTAAGTTTTTTGTTTGTTTGTTTGTTTTAAAGTGGTTT ...........::x.......................--...:.... 37M2I8M 41/45 91.1% 47/94230402 0.0% 2/45 4.4% 36592301 NA +3340 chr4 + 190214555 55164245 55164244 55164310 66 TGTAGTTTTGGCTTTCCTTTTCTTTTTTCTTTTTTTTTTTTTTTATTATACTTTAAGTTATAGGGT chr4 + 94230402 28634038 28634037 28634103 28634038 28634037 28634103 66 TGTGGTTTTTGTTTTCTTTCTCCTTTTTCTTTTTTTCTGTGTGTCTGACATTTCAAGAAATAGGGT ...:.....x.:....:..:..:.............:.x.x.x.x.x.:.:..:...xx....... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 26530207 NA +3015 chr4 + 190214555 55173475 55173474 55173525 51 ACACATACAGGTGTGTATATACATGCACACACATACATACACATGCACATA chr4 + 94230402 68837093 68837092 68837143 68837093 68837092 68837143 51 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA ..:::.:.:x......:.:....::..x.:...................:. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% -13663618 -80566784 +3102 chr4 + 190214555 55228596 55228595 55228656 61 ATATTTTAACAATATTAATTTTTTAAGCCATGAAGATGGTGTCATTTATTTGTGTCATCTT chr4 + 94230402 17208911 17208910 17208971 17208911 17208910 17208971 61 ATATTTTAACTATATTAATGGTTTGAGACTTAAGGATAGCACCATATATTTTTGTAATCTT ..........x........xx...:..x.x.:.:...:.:::...x.....x...x..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 38019685 NA +3105 chr4 + 190214555 55287762 55287761 55287809 48 TACTGACTCTACTCAAAATATAAGAAAGAATAAATTCATGTTTATAAT chr4 + 94230402 8311277 8311276 8311324 8311277 8311276 8311324 48 TACTGAAGCTTTTCAAAATGAAAGGAAGAATAAATTCATATTTATAAT ......xx..x:.......:x...:..............:........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 46976485 NA +3404 chr4 + 190214555 55288505 55288504 55288577 73 CACAGTGGTGTGCACCTGTGGTCCCAGCTGTTTGGGAGGCTGAGGTGGGAAGATCACTCGAGCCCAGGAGTTT chr4 + 94230402 76033197 76033196 76033267 76033197 76033196 76033267 71 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ..........--...x...:..:......::...::........x:xx.x::.x....:..:.....:..:.. 10M2D61M 52/71 73.2% 71/94230402 0.0% 2/71 2.8% -20744692 -73485710 +3040 chr4 + 190214555 55293004 55293003 55293095 92 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAAGCCGGGAGGCGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033197 76033196 76033291 76033197 76033196 76033291 95 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ..::....:--.::.x....:.:...........:.........x.xx.x...x::......x..:.:..x:xx:..:..:.----....-...... 9M2D71M4I4M1I6M 64/90 71.1% 95/94230402 0.0% 7/90 7.8% -20740193 -73490209 +3438 chr4 + 190214555 55325378 55325377 55325438 61 AGAGAAAGAAAGAAAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 26216014 26216013 26216074 26216014 26216013 26216074 61 AGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ..x...................x:..:...::::..:.....x:..:...:::.....x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 29109364 NA +3298 chr4 + 190214555 55350230 55350229 55350312 83 CATGGTGGCGAGCACCGGTAATTCCAGCTACTTGGGAGGCTGAGGTAGGAGAATAGCTTGAACCTGGGAGGTGTAGGTTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...xx...:.............::........x:xx.x...xx:........::.:..x.x.:..:..x.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -20682967 -73547435 +3615 chr4 + 190214555 55368239 55368238 55368321 83 CGGTGGTGCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACTAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:........x...----....:...........::........x.x:xx...x..........::.:..x:xx:..:..:.. 14M4D65M 58/79 73.4% 79/94230402 0.0% 4/79 5.1% -20664960 -73565442 +3165 chr4 + 190214555 55373762 55373761 55373854 93 CAGAGACCCTGCTCATCATGCTGCCTGCCTGTCTGCAGAT-----TTTGTTCACTCTTGGGAAAAAAAAAACAAAAACAAACAAACAAAAAAAAAACC chr4 + 94230402 74347595 74347594 74347692 74347595 74347594 74347692 98 CAGATATCCTCCTAGACATTCTCTCCGAACCTCTAGAAATAGCTTTCTGTCTGATCTTGGGAAAACAAGGAAACAAACAAACAACAAAAAAAAAAACC ....x.:...x..x:x...x..x:.:.xx:x...:x.:..-----.:...:::x...........x..::.x.x..........xx............ 40M5I53M 64/93 68.8% 98/94230402 0.0% 5/93 5.4% -18973833 -75256569 +3441 chr4 + 190214555 55378212 55378211 55378284 73 TGCACCTGTAGTCCCAACTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGCCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...:.......::........x:xx.x.:.x.x.....:.....:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -20654993 -73575409 +3352 chr4 + 190214555 55378325 55378324 55378400 76 GAGGGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAGAAAAAAA---AAAGGCCCCTCA chr4 + 94230402 16379592 16379591 16379670 16379592 16379591 16379670 79 GAGAAGAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAGGATTTTCA ...::::...:....:.x......x:.....x....x.:.......:..:...x...::..:..---.....x:::... 64M3I12M 54/76 71.1% 79/94230402 0.0% 3/76 3.9% 38998733 NA +3576 chr4 + 190214555 55383297 55383296 55383379 83 CGTGGTGGCACACGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::....--......:...........::.:......x.xx.x...x..........::.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -20649900 -73580502 +3049 chr4 + 190214555 55383761 55383760 55383829 69 GTACCTATAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATAGCTTGAGCCCGGGAGGTCGAGGCTG chr4 + 94230402 76033206 76033205 76033274 76033206 76033205 76033274 69 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .:..x.:....:...........::........x:xx.x.:.xx:.....:...:.:..x.:x:..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -20649445 -73580957 +3230 chr4 + 190214555 55402347 55402346 55402460 114 CGAAATCAGGTTTATCTGTGGTGTCATTGTTTAAGTGCGTGC---GTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34521974 34521973 34522084 34521974 34521973 34522084 111 CGAAAGAAGGTTT--TAGTGATATC----TTGAAGTAGATTCTTTGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTT .....xx......--:x...:.:..----..x....:x:.x.---..........:............:.:.x.x.xx.xx..:......xx.x.x....x....x.x..x...... 13M2D10M4D13M3I72M 79/108 73.1% 111/94230402 0.0% 9/108 8.3% 20880373 NA +3225 chr4 + 190214555 55402385 55402384 55402457 73 GTGCGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34522013 34522012 34522085 34522013 34522012 34522085 73 GTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT ...:......:.....:.:....:.:.x.x.xx.xx..:......x..:.x....x....x.x..x....... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 20880372 NA +3763 chr4 + 190214555 55402386 55402385 55402498 113 TGCGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTGTCACCCAGGCTGGA chr4 + 94230402 34522012 34522011 34522115 34522012 34522011 34522115 104 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT---------AAACAGAGTCCTGTGGATACTGAAGCTGAA ..:........:.....:......:.:.x.x.xx.xx..:......x..x.x....x....x.x..x.......---------.:........::::x.x:..:x.:....:. 74M9D30M 73/104 70.2% 104/94230402 0.0% 9/104 8.7% 20880374 NA +3079 chr4 + 190214555 55402391 55402390 55402452 62 GTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTT chr4 + 94230402 9942689 9942688 9942750 9942689 9942688 9942750 62 GTGTGTATGCATGTATAGATATATTTGTATACATGCACATACTGTATTTTTCCTATTTTTTT ......:..::......x......x.:....:..::.:...:xx.x.....::.x....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 45459702 NA +3107 chr4 + 190214555 55402391 55402390 55402456 66 GTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9942685 9942684 9942750 9942685 9942684 9942750 66 GTAAGTGTGTATGCATGTATAGATATATTTGTATACATGCACATACTGTATTTTTCCTATTTTTTT ..:x......:..:..:....x......x.:....:..::.:..x:.x.x.....::.x....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 45459706 NA +3202 chr4 + 190214555 55402396 55402395 55402459 64 TGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGA-----GTTTTTGTTTGTTTTTATTATTTTTTT .........:.:.......:.:........x.-----:.....x...x.....x..x....... 32M5D27M 49/59 83.1% 59/94230402 0.0% 5/59 8.5% 22151393 NA +3017 chr4 + 190214555 55402413 55402412 55402451 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 30609787 NA +3113 chr4 + 190214555 55403391 55403390 55403444 54 ACTAGAAAAGGAATTACTTTTTTCTTTGATTTTCTTTTTCTTCCTTCTCTTGAG chr4 + 94230402 23282932 23282931 23282985 23282932 23282931 23282985 54 ACTAGAGAAACAATGATTTCTTTCTTTGCTTTTGTTTTTCTTCGTTTTCATGAG ......:..:x...x.:..:........x....x.........x..:..x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 32120459 NA +3328 chr4 + 190214555 55403432 55403431 55403562 131 TCCTTCTCTTGAGGATCATGAAAGTATAAAAGAATACTTTCTAAATGAGGGTGCCTTTTTCTTTTTCTTTTTTTTTTTTTTACAATTTTTACATTT-------GGAATTAAAATTTTAACTAGAAAAGAGTTTTTATT chr4 + 94230402 19098491 19098490 19098623 19098491 19098490 19098623 133 TCCCTTTCTTGAAAGGCAGAAAAAGAAGAGGGAACTCCTTTTAACTGAAATATCTTTTCTTTTTTTCTTTTTTTTTTCCTTTCAGGGCTTATAAACAATGAAAAAAATGAAAATT-----CAAAATAGTGTTTTTGTT ...:.:......:::x..x:...:x.x:.::...:x.:..:...x...::xxx.:...:.:................::..x..:xx:...:.xx:-------::...x......-----:.:..x..x......:.. 96M7I12M5D18M 80/126 63.5% 133/94230402 0.0% 12/126 9.5% 36304941 NA +3108 chr4 + 190214555 55410072 55410071 55410132 61 CCTCCTCCTTGCCTCCCACCAGCCTTCCCTCCTTTTCTCTTTCTTCTTATTTCTTGTAACT chr4 + 94230402 70062263 70062262 70062323 70062263 70062262 70062323 61 CCCCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTTGTAACT ..:.:...:...:...::.:xx:..:x.:.::....:.:...:.:................ 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -14652191 -79578211 +3383 chr4 + 190214555 55410999 55410998 55411077 79 GTGGTGCATACCTATAATCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x.:..:.:...........x:........x.xx.x...x.:........::.:..x.xx:..:..:.. 8M2D69M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -20622202 -73608200 +3007 chr4 + 190214555 55421276 55421275 55421331 56 TTTTAAATATTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTG chr4 + 94230402 7066071 7066070 7066126 7066071 7066070 7066126 56 TCTTAAATATTTTCTCTCTCTCTTTTTTTTTTCTTTCTAGTTTCAGCTGAGTTTTG .:.............:...:............:...:.xx...x..x:::.x.:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 48355205 NA +9880 chr4 + 190214555 55453674 55453673 55453842 169 TACCTTACTACAGTGTGAGTACAAACAATAAACTCTGGCCTTGAATTCCACTGATGGTAAGTGATATAATAATGAGTCTGAAGCCAAATCCACTGTTGCCCCTTAGTCAGGAACCTATAATAACATGATTTGCCTTTCCCATATTGCATTACTAAAAGGAAAATAGAGA chr4 + 94230402 17558750 17558749 17558918 17558750 17558749 17558918 169 TACCTAACTACCAGGTGAGTGCACACGATGAACTCGGGCTTGGAATTCCATTGGTGGTAGGTGATGTAGTAGTGTGTCTGCAGCCAGATCCACTGCTGGCCCTTGGTCAGGAATCGGTAGTAACATGACTTGCCTTTTCCAAATTGCATCACTGGTAAACAAAAAGAAA .....x.....x:x......:..x..:..:.....x...:.x........:..:.....:.....:..:..:..x.....x.....:........:..x.....:........:.x:..:........:........:...x.......:...::x.::x...x...:. 169M 130/169 76.9% 169/94230402 0.0% 0/169 0.0% 37894924 NA +6817 chr4 + 190214555 55455891 55455890 55456006 116 ACTTACAGTGCTCATGACATTTTGCCAAATTTTCTAGGTCATCCACATGATAGTAATCATAGCCTGATGTTCCCAGAACTTCAAATGGCAAATACCCTATTATGGGTGGTGCCCTA chr4 + 94230402 17560909 17560908 17561024 17560909 17560908 17561024 116 ACTTACAGTGTTCATGGCACCTAGCGAGAAGCTCCAGGTCATCTGCATGGTAGTAGTCATACCCTGACGTTCCCAGCACCTCAAAGGGTAAGTATCCTATAATAGGCGGAGCCCTA ..........:.....:..::.x..x.:.xx:..:........::....:.....:.....x.....:........x..:.....x..:..:..:.....x..:..:..x...... 116M 89/116 76.7% 116/94230402 0.0% 0/116 0.0% 37894982 NA +5866 chr4 + 190214555 55456214 55456213 55456312 99 TTACCTGTGATCTAGAAACAGAAACTTCCATTCTAAACTATGTCTAGATGTAAACTCTTCATTGGGTTCTTCAACAGTGCACATTTCCTACAAATAAAT chr4 + 94230402 17563951 17563950 17564049 17563951 17563950 17564049 99 TTACCTGTGGTCCAAGAATAAAAACTTCCACTCCAAACTATGCCTCGATGTAAATTCTTCACATGGCTCTTCAACATTGCAGAGCTCCTGCAAAACAAT .........:..:.::..:.:.........:..:........:..x........:......:xx..:.........x....x.x:....:....xx... 99M 77/99 77.8% 99/94230402 0.0% 0/99 0.0% 37892263 NA +3123 chr4 + 190214555 55457624 55457623 55457669 46 TGATTACTTTTCTAGCCTTACCTCCCACTATCTCTTCCCCCTCCAC chr4 + 94230402 31874090 31874089 31874135 31874090 31874089 31874135 46 TGATCCCTCTTCTTTCTTTACCTCCCACTGTCTCTTCCTCCTCCAC ....:x..:....xx.:............:........:....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 23583534 NA +5450 chr4 + 190214555 55459093 55459092 55459276 184 GAGCACAGAAAAATAACAAGTTAAA----ACACATTGTGAGAGAAGCAT----------TTTAACTCACCACTGTTTAAAGATTTGAAATTTCCTATAAATTTTACATATTCATAGGTAGATGGCTCCTTTGGGTCTATTGTTCCTCGCAGCATGTGACAACAGAATTCTAACTGATTTTTTGCTGAAATAAAAGAGA chr4 + 94230402 17565679 17565678 17565876 17565679 17565678 17565876 198 GACTACAGAAGAACACGAAATTAAAGGAGAGAGACTAAGGGGTAGTCATAGGCTGGAGATGTTACTTACCATGAGTAAAATATTTAAAATCCACTACAAATTTTACATATTCATATGTCAGAGGTTCATTTGGATCTAAGCTGCCTCTTGCTAAATGGCAGCAAAACTCTACTTGCTTTTCCACTGAAAAGAGAGAAA ..x:......:..:.xx..:.....----.x.x.:.:x.:.:x.:x...----------.x.x...:....:x:x.x...x....:....::x...:..................x..x::x..:..x.....:....xxx.x....x::x:.x:..:..:..:..:....x:..x....:::......x:.:...:. 25M4I20M10I139M 120/184 65.2% 198/94230402 0.0% 14/184 7.6% 37893414 NA +6352 chr4 + 190214555 55475947 55475946 55476065 119 TTAAATCTGGACATACCTCTAACATTAATTGTGTAAACTCTTCATTACTAAGGAATGTAGGTTTCCAGTCCTGTCGAATTTCACTAGCATCTGACTGTGCAGTGATTTCTGTAAACAGA chr4 + 94230402 17569339 17569338 17569457 17569339 17569338 17569457 119 TTTAATTTCTTCTTACCTCTAACATCAACTGGGTGAACTCCTCGTTGCTAAGAAATGAAGGCTTCCAGTCTTGTCTAATCTCACAGGCTTCTGTCTGTGCTGTGATTTCTTCAAGAAAA ..x...:.xxx.x............:..:..x..:.....:..:..:.....:....x...:........:....x...:....x:..x....x......x.........x:..:x.:. 119M 90/119 75.6% 119/94230402 0.0% 0/119 0.0% 37906608 NA +7229 chr4 + 190214555 55478812 55478811 55478966 155 TACCTTTATGTTTTCGTAAAAAATCAATGCTTTTCTGCAGAACAGTAGATTTGTCCATCTTTCTAG------CATTACCAGGAAGCATGGATCCCAGTTCTTTAATGAGAACATTAAATTGATCTCTACGTTTCTTTTCAGATTTGTTTCTAGATACTCTG chr4 + 94230402 17569685 17569684 17569845 17569685 17569684 17569845 161 TACCTTTCTGTTTCTGTAAGAAGTCGATGGTCCTCTGCAGTATGGTGGATTTGTCCATCTTGAGAGGGTGGCCGTGCCCCTGCAGCATCGTGCAGAGCTCTTTAATGAGGACATTGAACTGGTCTCTCCTCTTCTTTTCAGATTTGTTGCGTGATGCCCTG .......x.....::....:..:..:...x.::.......x.::..:..............xxx..------.:.xx..xx.x.....x.xx.xx..:...........:.....:..:..:.....x.x:.................x.xx...:.:... 66M6I89M 115/155 74.2% 161/94230402 0.0% 6/155 3.9% 37909127 NA +3089 chr4 + 190214555 55491203 55491202 55491264 62 TAAAAATGAAGAAAGATTCCTGCAGGTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAGGAAAG chr4 + 94230402 69516218 69516217 69516279 69516218 69516217 69516279 62 TGAAAATGAAAACAGATTACATCATGTTATCTAAAAAAAAAAAAAAAAAAGGAGAGGGGAGG .:........:.x.....x.xx..x..xxx....................::.:.:..:.:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -14025015 -80205387 +3117 chr4 + 190214555 55526807 55526806 55526876 70 CAAAGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.....:--....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -20506390 -73724012 +3944 chr4 + 190214555 55528210 55528209 55528288 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% -20504991 -73725411 +15081 chr4 + 190214555 55540584 55540583 55540835 252 ATTTGGACCTTGA-------GAGCTTGCTCGAAGGTTCTAGCAGGGGAGCGCAGCTGCTCGTATACCCTTGACCCAAGACCAGT-CCTCCTCTATTTGGGATGGTTGTCCTCTTCAACCAAGCACGCAGCTTCAGCTTCAGGAGGGACGCACGTGGAGTGGAGAGGGAGGAAGGGGACACCTGCCGAGCCAGCCAGATGAGCTGAATCAACCCTGGGGATCAATGGGGTAAC--ATGTCACAGCCAGATAGCCCTCACATTC chr4 + 94230402 24950287 24950286 24950541 24950287 24950286 24950541 255 ATTTGGATGTTTAATTTCTTGAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGG------GAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCC .......:x..x.-------.......:.:.:........................:.-..............:x.x..x.:..-..x:......:x....x...:.........:.......::........:.------...........:.....:..x...:........:......::..x............x...::............x............:..--.....:.........x..........:. 13M7I38M1D25M1I50M6D91M2I28M 207/245 84.5% 255/94230402 0.0% 17/245 6.9% 30590297 NA +3164 chr4 + 190214555 55584214 55584213 55584284 71 AGTATACAGAAATGTTACTAG-TTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTTGAGATGAAGT chr4 + 94230402 5942435 5942434 5942503 5942435 5942434 5942503 69 AGTTTGTAGTAATATCTTAAGATGTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTGTTTT---AATGAAGT ...x.::..x...:.:x:x..-.x...............................xx....---:....... 21M1I39M3D8M 55/68 80.9% 69/94230402 0.0% 4/68 5.9% 49641779 NA +3188 chr4 + 190214555 55584239 55584238 55584282 44 TTTTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTTGAGATGAA chr4 + 94230402 23298710 23298709 23298753 23298710 23298709 23298753 44 TTTTTGTTGTTGTTGTTTTGTTTTGTTCTCTTTTTAAAGTTGAA ...........................:.x.....x:..x.... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 32285529 NA +3153 chr4 + 190214555 55595527 55595526 55595584 58 ACATATTTCCCAGCTGTATATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 68064811 68064810 68064868 68064811 68064810 68064868 58 ATATGTGTCCTTATTGTATATTTATGTATATACAGATACACACAAACACACACGAACA .:..:.x...:x::.......x...:......:.x.........x........:x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -12469284 -81761118 +3105 chr4 + 190214555 55595539 55595538 55595580 42 GCTGTATATATATATATATATATATACACACACACACACACA chr4 + 94230402 4409080 4409079 4409121 4409080 4409079 4409121 42 GCTGTACATATATATATATATACACACACAGAGACACACACA ......:...............:.:.....x.x......... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 51186459 NA +3703 chr4 + 190214555 55595545 55595544 55595609 65 TATATATATATATATATATACACACACACACACACACACATGCACACAGACAGAAGAAATATATA chr4 + 94230402 4409082 4409081 4409146 4409082 4409081 4409146 65 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAAACAAACA .:..:.......................x.x..........x:x.x.x::.........:.x.:. 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 51186463 NA +3093 chr4 + 190214555 55595592 55595591 55595644 53 AGACAGAAGAAATATATATATGTGTGTGTGTGTATATATATATATATATATAT chr4 + 94230402 85548421 85548420 85548473 85548421 85548420 85548473 53 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .:.x.:..:...x.xx.......:........:...:..........x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -29952829 -64277573 +3267 chr4 + 190214555 55595612 55595611 55595658 47 TGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251049 33251003 33251002 33251049 47 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTT ...................:.:........x.x.....x...x.... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 22344609 NA +3448 chr4 + 190214555 55603919 55603918 55604026 108 AAAAAAAAATATATATATATATATATATGTATATATGTGTATATATATACGTATATATGTATATATGTGTATATATATACGTATATATGTATATATGTGTATATATAT chr4 + 94230402 21109175 21109174 21109282 21109175 21109174 21109282 108 AAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGT .....x..:x.x..x.::x....:..:...:.x.x....x:::...x..::.:..:x:::.....:x:..:..:x.........:..:x:..::x.x...:.....:. 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% 34494744 NA +3098 chr4 + 190214555 55612260 55612259 55612342 83 CATGGTGGCATGCTCCTGTAGTCCCAGCTATTCAGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTCGTAGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...x.x......:.......:.::::........x:xx.x.:.x::.....:.....:..:.:xx:.....:. 8M2D73M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -20420937 -73809465 +3661 chr4 + 190214555 55618571 55618570 55618705 135 TTCTTTTCTTTCTTTCTTGTCTTTCTTTCTTCTCCTTCTTTTCTCTCTCCTCTT-------TCTTCT----------TTCTTTTCTTCTCTCTTTCTTTCTCATCTTT---CTTCTCTCTCTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTT chr4 + 94230402 72471361 72471360 72471512 72471361 72471360 72471512 152 TTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTC---CCTTTCTGACTCCTTT ..:.:....xxx........:.x....:..:..::.........:.:.::....-------....:.----------.x:....x.x..:x:..x.x.x..:...x..---x.:.:.........:..x:..:...---.:.:...xx..:.... 54M7I6M10I31M3I25M3D16M 92/132 69.7% 152/94230402 0.0% 23/132 17.4% -16852790 -77377612 +3087 chr4 + 190214555 55618664 55618663 55618747 84 TCTCTCTCTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTC---------TTCTCTCTTTCTTCTTTCTTTCTTTTTCTTC chr4 + 94230402 40546857 40546856 40546949 40546857 40546856 40546949 93 TCTCTTGCTTCCTTGCTTCTTATTGATTTCTCTTTCTGTTTTCTCCTTCCTTTGGATTTTGATTCCCTCCAGTTCTTGTTTTTCTTTTTGTTC .....:x.......x.....:x:.xx:......:...x:.....::...:..:---------...:...:xx:.::.x.:.........x... 53M9I31M 58/84 69.0% 93/94230402 0.0% 9/84 10.7% 15071807 NA +4293 chr4 + 190214555 55618666 55618665 55618798 133 TCTCTCTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTCTTCTCTTTCTTTCTTC--------TCTCTCTTTCTTCTCTTTCTTTCCCTTTCTTTCTTCTC chr4 + 94230402 50176267 50176266 50176407 50176267 50176266 50176407 141 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTC .:...x.::.x:.x:....::..::.:..:.x..:x.::x.....x.x..x....:...x.::.:.x.x..:x.....x.::.............--------:...:.:x.:....:x.::::.:.:.........:... 95M8I38M 84/133 63.2% 141/94230402 0.0% 8/133 6.0% 5442399 NA +3218 chr4 + 190214555 55618667 55618666 55618726 60 CTCTCTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTT chr4 + 94230402 10672517 10672516 10672576 10672517 10672516 10672576 60 CTCTCTCTTTTACCCCTGGCTTTTTTCTTTCTCTTGTTTCTTTTTCTATCCCCTCTATTT ......:::..x.::..xx....:....:......x...........x..::....x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 44946150 NA +3236 chr4 + 190214555 55618670 55618669 55618744 75 TCTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTC chr4 + 94230402 93757964 93757963 93758038 93757964 93757963 93758038 75 TCTTCCCTTGCTGTCTTTTTCATCTTTCGTTTCTTTATTCCTCTGTCTTCCTCCTTTTGCAATTTCTTCTCTTTC ......:..x:.x...:....x...:..x:......x..::...x.....:::....:x:xx..::....:.... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -38139294 -56091108 +4316 chr4 + 190214555 55618678 55618677 55618823 146 TCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTCTTCTCTT--TCTTTCTTCTCTCTCTTTCTTC----TCTTTCTTTCCCTTTCTTTCTTCTCTTCCTTTTCTTCTCTTTCTTCTCTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCC--CACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .:....x...:x..x.....::.....:....x..:x:.--.x..:..x.x.:x........x..::..x.x..--.:...x.::...:.........----:.:x:..::..x...::..x.:::....:...::.....:.:.x.:::.. 39M2D33M2I22M4I50M 94/144 65.3% 150/94230402 0.0% 8/144 5.6% 5442412 NA +3533 chr4 + 190214555 55618695 55618694 55618821 127 CTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTT--------TTCTTCTCTTTCTTTCTTC---TCTCTCTTTCTTCTCTTTCTTTCCCTTTCTTTCTTCTCTTC-------CTTTTCTTCTCTTTCTTCTC chr4 + 94230402 21408807 21408806 21408950 21408807 21408806 21408950 144 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCT-TGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCC ..:.:x.:..:......x:.xx....:...x.:..x.:.:.......--------...::.:.:.:..::..x.---::x:........:............::.-.xx....x..x.-------..........:x:::...:. 47M8I19M3I28M1D12M7I20M 86/126 68.3% 144/94230402 0.0% 19/126 15.1% 34209888 NA +3124 chr4 + 190214555 55618709 55618708 55618800 92 TTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTCTTCTCTTTCTTTCTTCTCTCTCTTTCTTCT----------------------------------CTTTCTTTCCCTTTCTTTCTTCTCTT chr4 + 94230402 22331049 22331048 22331174 22331049 22331048 22331174 126 TTTTTTTTCCCTCTTTTTCTATTTTCTTTCTTTTTCATCTCCTCGCCATCTCTCCCTCCATGTCCTACCAAAAAAGTTTGGGTAGTTGCACATTAAGTTGTTTTTTTTCCTTTTTCTTTTTCTTTT ...:...:::....:.....x:..............x....:.:x::x::....:...:x.x.:..----------------------------------:...:.....:...::..:....:.. 66M34I26M 64/92 69.6% 126/94230402 0.0% 34/92 37.0% 33287660 NA +3621 chr4 + 190214555 55618715 55618714 55618845 131 TCTTCTCTCTTT------CTTCTTTCTTTCTTTTTCTTCTCTTTCTTTCTTCTCTCTCTTTCTTCTCTTTCTTTCCCTTTCTTTCTTCTCTTCCTTTTCT-TCTCTTTCTTCTCTCT--TTCTTCTTTCTTTTCTCTCTC chr4 + 94230402 82976612 82976611 82976751 82976612 82976611 82976751 140 TCTGCTCCCTTTGGGCAAATTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTC ...x...:....------x....x...x......x:.....:.x....:::x...x::...:x.x.xx:...:x:.::.:..:...:..:.:.:......-...xxx..::..:.x.--......:...x.....:::.. 12M6I82M1I16M2I21M 86/131 65.6% 140/94230402 0.0% 9/131 6.9% -27357897 -66872505 +3603 chr4 + 190214555 55618795 55618794 55618903 109 TCTCTTCCTTTTCTTCTCTTTCTTCTCTCTTTCTTCTTTCTTTTCTCTCTCTTTCTTTCTTCTCTCTCTCTTTCTTTCTTTCTCTCTTTCTTTTTTTTTTTTTGTCTGG chr4 + 94230402 69568172 69568171 69568279 69568172 69568171 69568279 108 TCTGTTCCGTTACTACAGTACTTTCCTTGCTGCTCAGTTATTTCCTC-CTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTGGCTGG ...x....x..x..x.xx.x::...::.x:.x..:xx..x...:...-..:.x...:..:...x.....:..:..:x...:xx:::...:..............x.... 47M1D61M 72/108 66.7% 108/94230402 0.0% 1/108 0.9% -13949377 -80281025 +3043 chr4 + 190214555 55626711 55626710 55626745 35 AACAAAAACAAAACAAACAAACAAAAAACCAACAA chr4 + 94230402 47156803 47156802 47156837 47156803 47156802 47156837 35 AAAAAAAACAAAACAAACAAACAAAAAACCAACAA ..x................................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 8469908 NA +3687 chr4 + 190214555 55629488 55629487 55629603 116 GTGCGCCTGTACTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG----------TGAGCGGAGATAGAGCC----ACTGCACTCCAGCATGGTGACAGCA chr4 + 94230402 76033204 76033203 76033332 76033204 76033203 76033332 129 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCA ....:.x....x.:...........::........x:xx.x...x.:.........:.:..x:xx:..:..:..----------::...:..x:.:x:x..----x....x.-.............x... 74M10I17M4I7M1D17M 81/115 70.4% 129/94230402 0.0% 15/115 13.0% -20403716 -73826686 +3837 chr4 + 190214555 55639821 55639820 55639905 85 GATGCAGTGGCGTGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGTGGATTGCTTGAGCCCAGGAATTTGAGGTTGCAG chr4 + 94230402 76033193 76033192 76033277 76033193 76033192 76033277 85 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..xx.xx......x......:.:.......::::........x.xx...:.x::.....:.....:.::..x:..:..:.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% -20393372 -73837030 +3835 chr4 + 190214555 55659548 55659547 55659631 84 ACATGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATCATTTGAGCCTAGGAGCTCAAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....::...:--......:.........::::.....:..x.xx.x...x..:....:..:..:....:x:.....:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -20373648 -73856754 +3035 chr4 + 190214555 55663277 55663276 55663350 74 GTGCGCCTGTAGTCCCAGCTACTTAGGAGGTTGAGGTGAGAGGATCACTTGAGCCCCAGAGGCGAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:..........:::...:....x:xx.x.:.x.......:...x::..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -20369927 -73860475 +3285 chr4 + 190214555 55669427 55669426 55669494 68 ACTAAAAAAAAAAAAAAAAAGAGAGAGAAAAATAAATGTAGAAAAGTGGTTTTTTGTTTTTTTTTTTT chr4 + 94230402 64241140 64241139 64241204 64241140 64241139 64241204 65 ACTAAAAAAAAAAAAAAAGGGAGAGAGAAAAATTCAGATAAAAATTTG---TTCTGTTTATCATTTTT ..................::.............xx.x:..:...xx..---..:.....x.:x..... 48M3D17M 52/65 80.0% 65/94230402 0.0% 3/65 4.6% -8571713 -85658689 +3068 chr4 + 190214555 55689166 55689165 55689224 59 CCTCTCAAAAACAAACAAACAAACAAACAAATAAATAAATAAATAAAATAATTTTTTTT chr4 + 94230402 37420839 37420838 37420897 37420839 37420838 37420897 59 CTTCTCAAAAGAAAAAAAAAAAACAAATGAACAAACAAATAAAGGAATGGATTCTTTTT .:........:x...x...x.......::..:...:.......x:..xx:...:..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 18268327 NA +3319 chr4 + 190214555 55705632 55705631 55705683 52 TTGCAT-TTCTGTTTTTTGTTTTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTT chr4 + 94230402 43232278 43232277 43232330 43232278 43232277 43232330 53 TTGCATCTTCTGTTTTTGGTCGTTGTTTTTTTTTGTTTATTTGTTTGTTTTTT ......-..........x..:x........x.......:...........x.. 6M1I46M 46/52 88.5% 53/94230402 0.0% 1/52 1.9% 12473354 NA +3102 chr4 + 190214555 55705636 55705635 55705697 62 ATTTCTGTTTTTTGTTTTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTGAGATGGAG chr4 + 94230402 41855242 41855241 41855303 41855242 41855241 41855303 62 ATATCTGTTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTGGTGGGGAG ..x........x.x..xxx.:....x..................xx........:x:x.... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 13850394 NA +3180 chr4 + 190214555 55759123 55759122 55759202 80 AGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGTGTGGGAGATACAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--...:.x......:...........::........x:xx.x.:.x.:.....::x::.:..x.x::.....:.. 5M2D73M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% -20274077 -73956325 +3010 chr4 + 190214555 55761525 55761524 55761580 56 ACTGAAATATATATATACACACACATAC--ATACTATATATATATACACATATATATA chr4 + 94230402 87329502 87329501 87329559 87329502 87329501 87329559 58 ATTGAAATGTATATATATACACGTATACTAGCAGTGTACATACATACACACACATATA .:......:........:....::....--::.x.:..:...:.......:.:..... 28M2I28M 43/56 76.8% 58/94230402 0.0% 2/56 3.6% -31567977 -62662425 +3172 chr4 + 190214555 55770295 55770294 55770341 47 CAAAAAAAGAAAGAAAGAAAACAACAACAACAACAACAAAAACCCTA chr4 + 94230402 66076813 66076812 66076859 66076813 66076812 66076859 47 CATGAACAGAAAAAAAACAAACAACAACAACAACAAAAAAAACCCTA ..x:..x.....:...:x..................x.......... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -10306518 -83923884 +3035 chr4 + 190214555 55770297 55770296 55770338 42 AAAAAAGAAAGAAAGAAAACAACAACAACAACAACAAAAACC chr4 + 94230402 27313598 27313597 27313639 27313598 27313597 27313639 42 AAAAACAAAAAACAGAAAACAACAACAACAACAAAAAAAACC .....x:...:.x.....................x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 28456699 NA +3490 chr4 + 190214555 55780913 55780912 55780998 86 GGAAGAGAGAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGCAAAGAAGGGAGGGAGGGAGGGAGGAAGGGA chr4 + 94230402 1500700 1500699 1500785 1500700 1500699 1500785 86 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGA ..:::.....:.....:x..::.....:.:x..:..:.:.:.....::..:x.:.x....:..::.x:.:...x.:x.x..:.... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 54280213 NA +3176 chr4 + 190214555 55824252 55824251 55824295 44 AAGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248045 75248044 75248088 75248045 75248044 75248088 44 AATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x:..::...............x.x.................. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -19423793 -74806609 +3116 chr4 + 190214555 55824252 55824251 55824293 42 AAGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601298 12601297 12601339 12601298 12601297 12601339 42 AAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:x.x.................x.......:.......... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 43222954 NA +3002 chr4 + 190214555 55824255 55824254 55824289 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 43222950 NA +3124 chr4 + 190214555 55824255 55824254 55824289 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248054 75248053 75248088 75248054 75248053 75248088 35 TCTCTCTCTCTCTCTCTCACACACACACACACACa ..................x................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -19423799 -74806603 +3253 chr4 + 190214555 55824255 55824254 55824293 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -19423795 -74806607 +3316 chr4 + 190214555 55824256 55824255 55824291 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 43222952 NA +3438 chr4 + 190214555 55824256 55824255 55824291 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% -19423797 -74806605 +3468 chr4 + 190214555 55869225 55869224 55869295 71 ACATGGTGGCATGCTCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCGCTTGAACCTGGAAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....--...x.x...:..:...........::........x.x::x...x.:........::.... 9M2D60M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -20163971 -74066431 +3273 chr4 + 190214555 55882097 55882096 55882144 48 TTTTTGTTGTTGTTGTTGTTGTATTGTGTTTTGTTTTGTTTTTGTTTT chr4 + 94230402 57172800 57172799 57172847 57172800 57172799 57172847 48 TTTTTGTTCTTGTTGTTGTTGTTTTGTGGTTTGTTTGTTTTTTATTTT ........x.............x.....x.......xx.....:.... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -1290703 -92939699 +3217 chr4 + 190214555 55900749 55900748 55900819 71 GCTCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGATCCTAGGAGGTGGTGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x.x......:.:.........::........x.xx.x...x.......x..:..:..x.xxx..:..:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -20132457 -74097945 +3072 chr4 + 190214555 55903136 55903135 55903186 51 CGTGTCTCAATTAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAA chr4 + 94230402 58237339 58237338 58237389 58237339 58237338 58237389 51 CATGTTACGATTAAAAAAAAAAAAAAAAAGAAAGCAATTTAGAAAAATAAA .:...:x.:.........................x..xxx.......x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -2334203 -91896199 +3171 chr4 + 190214555 55917543 55917542 55917590 48 TTTTTTGTTTTTTTTTTTGTTGTTGTTGTTTGTTTTTATTTTGACAGG chr4 + 94230402 27444619 27444618 27444666 27444619 27444618 27444666 48 TTGTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGTAGG ..x....x.x.........................x.x.....::... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 28472924 NA +3216 chr4 + 190214555 55958295 55958294 55958364 70 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTAGGCAGATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x......:..........:::........x:xx.:::.x.:........::.:.. 8M2D60M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -20074902 -74155500 +3096 chr4 + 190214555 55960786 55960785 55960855 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -20072411 -74157991 +3353 chr4 + 190214555 55961628 55961627 55961706 79 GTGGCGCATTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...--.x....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:...:. 8M2D69M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -20071573 -74158829 +3008 chr4 + 190214555 55961752 55961751 55961793 42 GAAAACTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 39858773 39858772 39858814 39858773 39858772 39858814 42 GAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAA ....:........:..............x..x....x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 16102979 NA +3606 chr4 + 190214555 55986402 55986401 55986484 83 CATGGTGGCATGCACCTGTGGTGCCAGCTACTTGGGAGGCTGAAGTAAGAGGATCACTGGAACCTGGGAGTTCAAGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x...:..x...........::.......:x:xx.x.:.x....x.....::.:..:.:x:........ 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -20046795 -74183607 +3304 chr4 + 190214555 56010233 56010232 56010293 61 TGCGCCTGTAATCCCAGCTGCTCGGAAGGCTGAGGCAGGAGAATCACCTGAACCTGGAGGC chr4 + 94230402 76033205 76033204 76033265 76033205 76033204 76033265 61 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...:.x....:.:......:..:.:.........x.xx.x...x...:......::..:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -20022972 -74207430 +3701 chr4 + 190214555 56019800 56019799 56019881 82 GTGGTGGCACACACCTATAGTCCCAGCTACTCAGGAGGCTGAAGCGTGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x.:....:.........::::.......:x.x..x...x.............:..x.xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -20013401 -74217001 +3156 chr4 + 190214555 56023102 56023101 56023165 64 GTGCACCTGTAGTCCCAGCTCCTCAGGAGGATGAGGCGGGAGGATCGCTTGAGCCCAGGAGTTT chr4 + 94230402 76033204 76033203 76033267 76033204 76033203 76033267 64 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ......x......:......x..::::...x....x.xx.x.:.x.:.....:.....:..:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -20010102 -74220300 +4086 chr4 + 190214555 56023971 56023970 56024100 130 ATATTATATAATATATTGTATGTTATATATTTATAATATGTATTTTACATATTATATGTTATATATTGTATATTTTATAATATATGTTACATATATTATATATTATATAATTAGTATATTAGTATTAGTT chr4 + 94230402 71903455 71903454 71903573 71903455 71903454 71903573 119 ACATTATCGAATGTATTATATATGAAATGTT------AGGTATTTTAATCATCATATGTATTATGATTTATATAAGATTAAACATGTTACATATATAATGCATTATATA-----TGCATTGATATCAATT .:.....xx...:....:...:.x.x..:..------.x........xx:..:......xx...:x.x.....xxx..x.x.:.............x..::........-----.::...::...:.:.. 31M6D72M5D16M 85/119 71.4% 119/94230402 0.0% 11/119 9.2% -15879484 -78350918 +3578 chr4 + 190214555 56032316 56032315 56032405 90 GCACCTGTAATCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGCTGCGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.:.....:.....::........x.xx.x...x::.........:.:..x.xx:.....::.------..x..x...... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% -20000890 -74229512 +3057 chr4 + 190214555 56039507 56039506 56039576 70 CATGGTGGTGTGCGCCTGTGGTCCCAGCTGCTCGGGAGACTGAGGCACAAGAATTGCTTGAACCTAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......::..--...:..:......:..:.::..:.....x.x::x...x::........:..:.. 14M2D54M 47/68 69.1% 68/94230402 0.0% 2/68 2.9% -19993690 -74236712 +3024 chr4 + 190214555 56042341 56042340 56042419 79 TTCCTTTCCTTTTCTTTCTTTCCTTTCTTCGTTCCTTTTCTTCCTTTCTTTTTCTTTCTCTCTTTCTTTCCTTCCCTCC chr4 + 94230402 53757784 53757783 53757862 53757784 53757783 53757862 79 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCC ...::....x.:.:....x:::...xxx..x::..::::.::..:.:......:..:..:.:.......::..:..:.. 79M 48/79 60.8% 79/94230402 0.0% 0/79 0.0% 2284557 NA +3343 chr4 + 190214555 56042342 56042341 56042462 121 TCCTTTCCTTTTCTTT---CTTTCCTTTCTTCGTT---------------CCTTTTCTTCCTTTCTTTTTCTT-------TCTCTCTTTCTTTCCTTCC--------CTCCCTCCTTTCCCTCCTTCCTTCCTTCCCTCCCTCCCTCCTTCCTT chr4 + 94230402 85792699 85792698 85792852 85792699 85792698 85792852 154 TCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ..:...:.:.....:.---...x.::...x..:..---------------.:.:....::..x:.......:.-------.:.:..x.x:....:.::.--------:..:..x..:.x....x..xx.:............:......:.::. 16M3I16M15I23M7I19M8I47M 84/121 69.4% 154/94230402 0.0% 33/121 27.3% -29750357 -64480045 +3039 chr4 + 190214555 56042545 56042544 56042592 48 CTCTCTCTCTCTCTCTCTCTTTCTTTCCCCTCCTCCTCCTCCCTCCCT chr4 + 94230402 50993449 50993448 50993496 50993449 50993448 50993496 48 CTTTCTCAGTCTCTCCCTCTTTTTTTCCCCTCTTCCTTCTCTCTGCTT ..:....xx......:......:.........:....:...:..x.:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 5049096 NA +3601 chr4 + 190214555 56059345 56059344 56059418 74 GTGCACCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGTATGGATTGCTTGAGCCTGGAAGTTCGAGGCTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:.........::::........x:x.:..:.x::.....:..::....:.:x:....::.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -19973859 -74256543 +3280 chr4 + 190214555 56070860 56070859 56070908 49 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACAGGCAGGTATACCT chr4 + 94230402 15641923 15641922 15641971 15641923 15641922 15641971 49 TGCGTGTATGTGTGTGTGTCTATGTCTGTGTCCACAGGCATATATAGCT ..:....:...........x.:...x..............x:....x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 40428937 NA +3188 chr4 + 190214555 56088118 56088117 56088179 62 TCTCTAGATTGTTTCTTTTTTTTTTTTTTTTTCTTTTCAGCTTTTATTTTAGGTTCAAGGGG chr4 + 94230402 23873382 23873381 23873443 23873382 23873381 23873443 62 TCCTGAGGTTGTTTTTTTTTTTTTTTTTTTGTCCTTTGGGATTTCAGTTTAGGTGTGTGGGG ..::x..:......:...............x..:...x:.x...:.x.......x::x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 32214736 NA +3595 chr4 + 190214555 56097420 56097419 56097477 58 GATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGA chr4 + 94230402 2289837 2289836 2289894 2289837 2289836 2289894 58 GACCTTCTCAGATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGA ..:..:x..x......:x.......x....:.:.....x...:...:........... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 53807583 NA +3422 chr4 + 190214555 56101627 56101626 56101705 79 GTGGTGGGCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGCAGGTAGAGTTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--..:x....:.:...........::........x.xx.x...x.:...........x..x.xx:.x:..:.. 6M2D71M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -19931574 -74298828 +3687 chr4 + 190214555 56122034 56122033 56122116 83 CACAGTGGTGTGCACCTGTAGTCCCAGCTACTGGGTAGACTGAGGTGGAAGGATTGCTTGAGCCCAGGAGTTCCAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--...x......:.........x.:x..:.....x:xx:x.:.x::.....:.....:..:.:::.....:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -19911163 -74319239 +3678 chr4 + 190214555 56130143 56130142 56130213 71 CACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGGTTGAGGCTATAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:...........::........x:xx.x.:.x::.....:.....:..x..x:....:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -19903064 -74327338 +3490 chr4 + 190214555 56134060 56134059 56134143 84 ACGTGGTTGTGCACACCTGTAGTCCCAGCTCCTCGAGAGGCTGAGGTGGGAGGATCACCTGAGCCCAGGAGGTGAAGGTTGTAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::..x......:--......:......x..:..:........x:xx.x.:.x...:...:.....:..x.xx:..:..... 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -19899136 -74331266 +3494 chr4 + 190214555 56139281 56139280 56139375 95 CTTCTTTTCTGAGTCTGGAAATAGTTCTCTCTCCCTTCCTCTCTTC--------------CTCTCTCTTTCTCTCTCTCTTTCTTTCCCCTCTCTCTTCACCTTACTTT chr4 + 94230402 50993390 50993389 50993497 50993390 50993389 50993497 108 CTCATTTTCTG-GTCTGAAAGAAGCTGTCCCTGCTGTTGTCTCTATTTATAACAAGCGAACTTTCTCAGTCTCTCCCTCTTTTTTTCCCCTCTTCCTTCTCTCTGCTTT ..:x.......-.....:..:x..:.x..:..x.:x.:x.....x:--------------..:....xx......:......:..........::....x.::.:.... 11M1D34M14I49M 68/94 72.3% 108/94230402 0.0% 15/94 16.0% 5145891 NA +3295 chr4 + 190214555 56139298 56139297 56139432 135 GAAATAGTTCTCTCTCCCTTCCTCTCTTCCTCTCTCTTTCTCTCTCTCTTTCTTTCCCCTCTCTCTTCACCTTACT------TTCTCAATCTTCTGTCTTTTTCATTGCTACTTGGGAAACAGCCTTGTTCTTTCCTTTCT chr4 + 94230402 12085010 12085009 12085141 12085010 12085009 12085141 132 GACACAGACCCCACTTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCT-------CCTCACTGGTGTACTTTGAATCCCTGAACTCTATCATTGTTCCTTAT--AACTGTGATGTGATTTACTTCCT ..x.:..x:.:.x..:.....:x:.x..:.x..::..:......:........:.....:..-------...:...------:.:.x....:::x:x..:.x......:.x...:x--...x.:xx...xx...x...:.. 62M7D7M6I34M2D23M 83/126 65.9% 132/94230402 0.0% 15/126 11.9% 44054288 NA +3379 chr4 + 190214555 56179881 56179880 56179946 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........::::........x.xx.x...x.:.......:...:.. 6M2D58M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -19853320 -74377082 +3570 chr4 + 190214555 56182010 56182009 56182069 60 ACTATTCCCATCTTACAAGTAGAGAAACAGGCTCAGAAAACTCAAATAACTTGCCCAAGA chr4 + 94230402 79532942 79532941 79533001 79532942 79532941 79533001 60 ATTATTTATGCTTTACAAATAGGAGAACAGACTCAGAAGACTGAAATAACTTGCCTAAGA .:....:x::::......:...:::.....:.......:...x............:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -23350932 -70879470 +4479 chr4 + 190214555 56188659 56188658 56188737 79 TTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGGG chr4 + 94230402 75248047 75248046 75248125 75248047 75248046 75248125 79 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaag .:..::...................x.x..............x.x.x.x.x.x.........:.:.:.:...:...::. 79M 61/79 77.2% 79/94230402 0.0% 0/79 0.0% -19059388 -75171014 +4729 chr4 + 190214555 56188663 56188662 56188735 73 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 75248049 75248048 75248121 75248049 75248048 75248121 73 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaag ..::...................x................x.x.x.x.x...........:.:.:.:...:.. 73M 60/73 82.2% 73/94230402 0.0% 0/73 0.0% -19059386 -75171016 +5046 chr4 + 190214555 56188665 56188664 56188737 73 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGGG chr4 + 94230402 75248049 75248048 75248121 75248049 75248048 75248121 73 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaag ..::....................................x.x.x.x.............:.:.:.:...::. 73M 61/73 83.6% 73/94230402 0.0% 0/73 0.0% -19059384 -75171018 +3102 chr4 + 190214555 56188667 56188666 56188702 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 43587363 NA +4928 chr4 + 190214555 56188667 56188666 56188735 69 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 75248049 75248048 75248117 75248049 75248048 75248117 69 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaag ..::.................x..................x.x.x...............:.:.:.:.. 69M 59/69 85.5% 69/94230402 0.0% 0/69 0.0% -19059382 -75171020 +4817 chr4 + 190214555 56188669 56188668 56188737 69 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGGG chr4 + 94230402 75248049 75248048 75248117 75248049 75248048 75248117 69 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaag ..::...............x.x..................x.x.................:.:.:.::. 69M 58/69 84.1% 69/94230402 0.0% 0/69 0.0% -19059380 -75171022 +3316 chr4 + 190214555 56188669 56188668 56188704 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 43587365 NA +3102 chr4 + 190214555 56188671 56188670 56188706 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 43587367 NA +4081 chr4 + 190214555 56199551 56199550 56199642 92 GTGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGACAGGAGAATCGCTTGAACCTGAGAGTCAGAGGCTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x....:.:............:........x.xx.x...x.:........::::..::xx:.....:..------..x...:..... 74M6D12M 64/86 74.4% 86/94230402 0.0% 6/86 7.0% -19833653 -74396749 +3242 chr4 + 190214555 56226812 56226811 56226891 80 TTTCTTTCCCTCTCCTTCACACCTCTCTCTCTCTGTGTGTGTCTCTTTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCT chr4 + 94230402 84992620 84992619 84992699 84992620 84992619 84992699 80 TTTCTTTCCCCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACT ..........:x..:xx....xx....:..:.:.x.x.x:x.:.:....::...::...:.x...:..:......:.x.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -28765808 -65464594 +3440 chr4 + 190214555 56254985 56254984 56255043 59 GCACCTATAGTCCCAGCTACTCGGGAGACTGAGGCAGGCAAATCACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x.:....:.........:.::..:.....x.xx.::..x.............:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -19778221 -74452181 +3694 chr4 + 190214555 56257930 56257929 56257999 70 CATGGTGGCGCGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:..::.--......:.:.........::........x.x..x...x.:.........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -19775267 -74455135 +3274 chr4 + 190214555 56294774 56294773 56294843 70 CGTGGTGGTGGGCACCTGTAATCTGAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x....:.::x.........::........x.xx.x...x::.............. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -19738423 -74491979 +3061 chr4 + 190214555 56294893 56294892 56294952 60 AGCAGAGCAAGACCTTGTCTCAAAAAAAAAAAAAAAAAAAAAGTAAAAAGAAAAAAAAGA chr4 + 94230402 18047932 18047931 18047991 18047932 18047931 18047991 60 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAA .:....:...xx.:..x...:............x........x.:..:.x:.x.....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 38246961 NA +3095 chr4 + 190214555 56341982 56341981 56342054 73 TGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATTGCTTGAACCCGTGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........:.::.......:x.xx.x...x::.........:x:..x:xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -19691223 -74539179 +3110 chr4 + 190214555 56343329 56343328 56343393 65 ACTCTGTCAAAAAACAAACAAACAAACAAAAAAATACATATATATATATATACAGGAATTTAAAT chr4 + 94230402 44979584 44979583 44979648 44979584 44979583 44979648 65 ATTCTGTGGAAAAACAAACAAACAAACAAAAAAAGGTATCTAACTTTATGAGAAAGTACTTAAAT .:.....x:.........................x::..x..xx.x...:x:x.:.x.:...... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 11363745 NA +3710 chr4 + 190214555 56346907 56346906 56346995 89 GTGGTGTATCTGTAGTCCCAGCTACTCCAGAAGCTGAGGTGGGAGCATCACCTGAGCCCAGGAGTTCGAGGGTGTAGTAAGCCATGATG chr4 + 94230402 76033201 76033200 76033286 76033201 76033200 76033286 86 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGATG ......:.:x......:.........:x.:.:......x:xx.x.x.x...:...:.....:..:.:x:..x.....x.---....... 79M3D7M 62/86 72.1% 86/94230402 0.0% 3/86 3.5% -19686294 -74544108 +3003 chr4 + 190214555 56355605 56355604 56355640 36 TTTTTTTTTTTGGTTTTGTTTGTTTGTTTTTTGAGA chr4 + 94230402 21804583 21804582 21804618 21804583 21804582 21804618 36 TTTTTTTTTTTGGTTTTTTTTGTTTGTTTTTCGAGA .................x.............:.... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 34551022 NA +3123 chr4 + 190214555 56359063 56359062 56359130 68 TTATAAAATTGTTATTGTTGCTTGCTTTTTTTTGTTGTTGTTGTTTTTGGTTTTTTTTTTTGCTAGTG chr4 + 94230402 9168652 9168651 9168718 9168652 9168651 9168718 67 TTTTAGGATT-TTATTTATGCTCGCTATTTTTTGTTGTCGTTGTTTTTGTTGTTTTCCCATTCTAGCG ..x..::...-.....xx....:...x...........:..........x.x....:::x.x....:. 10M1D57M 51/67 76.1% 67/94230402 0.0% 1/67 1.5% 47190411 NA +3891 chr4 + 190214555 56361270 56361269 56361351 82 GTGGTGGCACACACCTGTATTCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....x.:...........::........x.x..x...x.............:..x.xx:..:..::. 6M5D71M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -19671931 -74558471 +3158 chr4 + 190214555 56361842 56361841 56361914 73 TGCACCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCCAGAAGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:.........::::........x:xx.x.:.x.......:...x::.:x.:x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -19671363 -74559039 +3096 chr4 + 190214555 56376927 56376926 56376996 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -19656270 -74574132 +3280 chr4 + 190214555 56381448 56381447 56381520 73 TGCACCTGTAATTCCAGCTACTTGGGCAGCTGAGGCACAAGAACCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.............::x:......x.x::x...x.:........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -19651757 -74578645 +3522 chr4 + 190214555 56402685 56402684 56402758 74 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGTAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........:.::........x:xx.x...x..........::.:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -19630519 -74599883 +3168 chr4 + 190214555 56402784 56402783 56402846 63 CCAGCAGCCTGGGCAACAAGAGTGAAACTCGGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 34163477 34163476 34163539 34163477 34163476 34163539 63 CCAGCCTTCTGCGCAACCAGGGTTAAAGTCAAATGCCAAAAAAAAAAAAAAAACCAAAAAAAA .....xx:...x.....x..:..x...x..::x:x..................xx........ 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 22239307 NA +3543 chr4 + 190214555 56413761 56413760 56413825 65 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ......--...x....:.:...........::........x.xx.x...x.:...........:. 6M2D57M 51/63 81.0% 63/94230402 0.0% 2/63 3.2% -19619440 -74610962 +3434 chr4 + 190214555 56427532 56427531 56427601 70 CATGGTGGTAGGCACCTGTAGTGCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCGCTTGAGCTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.....--....x......x...........::........x.xx.x.:.x.:.....:.:...:.. 9M2D59M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -19605665 -74624737 +3115 chr4 + 190214555 56432962 56432961 56433000 39 ATATATATATACATATATACATACACACACGTATTTTAT chr4 + 94230402 41650596 41650595 41650634 41650596 41650595 41650634 39 ACATATATATATATATATACACACACACACGTATCTTAT .:.........:.........:............:.... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 14782366 NA +7761 chr4 + 190214555 56467586 56467585 56467867 282 TCCTGTTCCGGGGCAGAGGTCTCCCCGCCCCGCCCCTCGTCTCCTCCAAGATGGCGAGCGGCGGCAGCGGGGGG----GTGTCAGTACCTGCGCTGTGGAGTGAAGTGAACCGGTATGGCCAGAACGGCGACTTCACGCGCGCTCTCAAGACCGTCAATAAGAGTAAGTGTCGGGGTGGGCACTGGGGC--------GGGCCCAGGCCGGCTGGAGGATGCGGCCTGTTTCCGGCGCGCGAGACCACCTCGCGCGGGAGGCACGGGAAGGGGAGACCCCCGAAACCCCCCCGTC chr4 + 94230402 50719588 50719587 50719853 50719588 50719587 50719853 266 TCCGCTTCCGGGGCTG-----CTCCCGCACCTCTCCTC-CCGGCTCCGAGATGGCG-GCGGCGACTgcgggcggccccggggcggcgACGGCGCTGTGGAGCGAGGTGAACCGCTGCGGCCAGAACGGTGACTTCGCCCGCGCGCTCAAGTCTGTCAACAAGAGTGAGT----GAGCGCGCCCCGCCGCCGCGTCGTGTGCTCGTGCTGTGTTGGGGCGGTGGGCT-----CGGGGAGCGGGGCTGCCCT--------GGGACTGGGAGGGGAG----CCGAGCCGCCCTCCTC ...xx.........x.-----::.....x..x.:....-:.xx....:........-......:.x.....x..----.x.x.:.::x.x...........:..:........x.::...........:......:.x.....x......x.:.....:......:...----.:.:.x..x.:.xx..--------.x..:.:x..:.xx.x.:..xx.:..x..-----...x.x...:.:.::..::--------..x..x..:.......----....:x.x...:.x.. 16M5D17M1D17M1D17M4I91M4D16M8I29M5D19M8D16M4D16M 183/254 72.0% 266/94230402 0.0% 40/254 15.7% 5747998 NA +9281 chr4 + 190214555 56469630 56469629 56469779 150 CTTTTCCTAAAATTGTTCTCT-----AGTACTACAGATCAACAAAGATGACGTAACTGCCCTGCATTGTAAAGTGGTATGCCTTATCCAGAATGGAAGTTTCAAGGAAGCTTTGAATGTCATCAATACTCACACCAAAGTGTTAGCCAAGTAAGT chr4 + 94230402 50720605 50720604 50720759 50720605 50720604 50720759 155 CTTCTGTTAAAACTGTTCTCCCCTCCAGTTCTGCAGATCAACAAAGACGATGTGACTGCACTTCAGTGTAAAGTGGTATGTCTTATCCAAAATGGGAGCTTCAAGGAAGCCCTCAGTGTAATCAACACCCACACTAAAGTGTTGTCCAGGTGAGT ...:.x:.....:.......:-----...x..:..............:..:..:.....x..x..x..............:........:.....:..:...........::.x.:...x.....:..:.....:........:x...:..:... 21M5I129M 121/150 80.7% 155/94230402 0.0% 5/150 3.3% 5749025 NA +8370 chr4 + 190214555 56471697 56471696 56471851 155 ACTGTTTTTTTTTCCTTCTTCAGTAACTCTCTCTCCTTTGAAAAGGCATATTGCGAGTACAGGCTGAACAGAATTGAGAATGCCTTGAAGACAATAGAAAGTGCCAACCAGCAGACAGACAAACTGAAGGAGCTTTATGGACAAGTGGTAATTAC chr4 + 94230402 50723767 50723766 50723919 50723767 50723766 50723919 153 ACCTTTGTCTTGTCCTT--GCAGTGATGTTATTGCCTTTGAGAAGGCCTACTGTGAATACAGGTTGAATCGCATTGAAAATGCTCTCAAGACCATTCAGAGTGCCAGTCAGCAGACAGACAAACTGAAGGAGCTGTATGGACAAGTGGTAATAAC ..:x..x.:..x.....--x....:.:x:.x.:x.......:.....x..:..:..:......:....:x.x.....:.....::.x.....x..xx.:.......::..........................x.................x.. 17M2D136M 119/153 77.8% 153/94230402 0.0% 2/153 1.3% 5747930 NA +9991 chr4 + 190214555 56474050 56474049 56474393 344 TCAGTTATACCGTTTGGAACGCTATGATGAATGCTTAGCAGTGTATAGAGATCTCGTCCGAAACTCCCAAGATGATTATGATGAGGAGAGGAAAACAAACCTTTCAGCAGTTGTTGCAGCTCAAAGCAATTGGGAAAAAGTGGTTCCAGTGAGT----------------------------------------------------ATCCTT------------------------GTGGTGTACCC-------------------ATACAGTCAT--------GAATTATTATTC-----------------------------ATATTTAGTAT----------------TTAACTGGTATTT-------TGTCCCCTGACAGGAGAACCTGGGCCTCCAAGAAGGCACACATGAGCTGTGCTACAACACTGCATGTGCACTGATAGGCCAAGGCCAGCTGAACCAGGCCATGAAAATCCTACAAAAAGCTGAAGGT chr4 + 94230402 50724307 50724306 50724805 50724307 50724306 50724805 499 TCAGTTGTACAGGTTGGAGCGTTATGATGATTGTCTGGCTGCATACCGGGATCTCATCCGCAACTCCCAGGATGAGTATGAGGAAGAACGAAAAACCAACCTCTCTGCTGTTGTGGCAGCACAAAGTACATGGGAGAGAGTAACGCCAGTAAGTGAGTTGCTCACTTGTTGATTGCCTCTTGCTTTGTTGTGCAGTGCGAAGGAAAATCCTTTGCACTGTGACTTAAAATTGGCCGGTTGCATGCCCTTGTAAAACTGCCTCTAAAATATAGTTTTCTATAGCAAATTTATTTTGCAAGGAATGGTTTGAGTGTATCTGAAAGCTATAGTTTGTGTCTGTAGACATTATAGATCAGTTGGTGTTTACATTTGCTTTTCATGCTAGGAAAACTTGGGCCTTCGAGAAGCTACCTACGAGCTGTGTTATAACAACGCGTGTGCGTTGATTGGACAAGGAAAGCTGAATGAAGCAATGAAGAAACTACAGAAAGCAGAAGGT ......:...x.x.....:..:........x..::.:..x.::..:x.:......:....x........:.....x.....x..:..:x.:.....x.....:..x..x.....x.....x.....:.xx.....:.:...:::x.....:...----------------------------------------------------......------------------------..x.::.:...-------------------...:...:x.--------:.x.....x.x.-----------------------------...x..x..:.----------------.:.::....:...-------:x.::.x..x:....:...:.......:.:.....x:..x:.:........:..:....x:..:.....::....x..x.....xx.......:x.:..x.....:.xx.....:.....x...... 154M52I6M24I11M19I10M8I12M29I11M16I13M7I127M 250/344 72.7% 499/94230402 0.0% 155/344 45.1% 5749743 NA +3412 chr4 + 190214555 56477265 56477264 56477315 51 CTCTTTTCACATTCATAGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 + 94230402 17384394 17384393 17384444 17384394 17384393 17384444 51 CTCCACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ...:x:.x.....:..x.x.................:.............. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 39092871 NA +3078 chr4 + 190214555 56477267 56477266 56477313 47 CTTTTCACATTCATAGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 26578251 26578250 26578297 26578251 26578250 26578297 47 CTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT ..:..x:..x..xx.x............................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 29899016 NA +3389 chr4 + 190214555 56477272 56477271 56477316 45 CACATTCATAGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554012 6554011 6554056 6554012 6554011 6554056 45 CAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..x...::.x:.................................. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 49923260 NA +12878 chr4 + 190214555 56478304 56478303 56478670 367 GAATGTTTGGGTCATTTGGAAAATATGTAGAT--CAGTTTGGAAAATTTATATGGGAAAAACATTTCT---------TTCTCTTAGGATGGGACTGAGGAAGACCCACAGGCAGAACTGGCCATCATTCATGGTCAGATGGCTTATATTCTGCAGCTTCAGGGTCGAACAGAGGAGGCTTTGCAACTTTACAATCAAATAATAAAACTAAAGTGAG---TTATTAAAAGGAAGTG-----TCTTTTATAGGGGATGGGGTTCTTTTTAAAGGTTTGTTTGGTTTTGACTGTTGCTTGTTGTTCACAGACCAACAGATGTGGGATTACTAGCTGTAATTGCAAATAACATCATTACCATTAACAAGGTATGGAGT---ATTTGTGCTTTC chr4 + 94230402 50726535 50726534 50726919 50726535 50726534 50726919 385 GAATGCTGAAGCCATGGGAGAAGTGTTGAGATTGCAGGTTGTTGTGttttttaaaaaaaattatttttGCTTTGATTTTCTTTCAGGATGTGACTGAAGAAGATATTGAGGCTGAGCTCGCCATTATTCATGGTCAGATGGCATATATCATGCAACTGCAGGGTCGTACAGAGGATGCTCTACAACTCTACAATCAAATAATCAAGTTGAAGTAGGGGCTTTTCTAAAATACGTGCTTGCTCTTCCACCTGTAGAGAGACCACTGTTCAATAATAATGTGCTTTCTCCT----TTTTTTATTTGCAGGCCAACAGATGTAGGACTGCTTGCCGTCATTGCAAATAATATCATCACAATTAACAAGGTATAGAATTACCTTGCTGCTTTC .....:.x::.:...xx.::..:.:.xx....--...x...xx:x:...x.xx:::....x:....:.---------....:.:......x......:.....:x:xx....x..:..x.....:.................x.....:x....:..x........x........x...:.:.....:..............x..::.:....::.---..x.:x...:x.x...-----....::.:xx.x::x.:.:::x:.x..x..x:x.x:.x..x...:xx..----:..x..:..::...:...........:...:.:..x..:..x...........:.....:..x.............:..:.---x..xx....... 32M2I34M9I139M3I16M5I49M4D81M3I12M 253/363 69.7% 385/94230402 0.0% 26/363 7.2% 5751769 NA +3035 chr4 + 190214555 56479496 56479495 56479536 41 AAAAGCTTTATTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 68982951 68982950 68982991 68982951 68982950 68982991 41 AAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ..:..:.....:.....:...:...:............... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -12503455 -81726947 +3061 chr4 + 190214555 56479501 56479500 56479542 42 CTTTATTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGAGACT chr4 + 94230402 82923139 82923138 82923180 82923139 82923138 82923180 42 CTCCATTTTTCTTTCTTTCTTTCTTATTTTTTCTTTGAGGCT ..::..................:..x......:......:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -26443638 -67786764 +9163 chr4 + 190214555 56483082 56483081 56483275 194 AAGGAATAAGTTGAAATCTGAGATTCTGTTAATGATAGATAAACTTTTCTTTGTTAGGACCAAAATGTCTTTGACTCCAAGAAGAAAGTGAAATTAACCAATGCGGAAGGAGTAGAGTTTAAGCTTTCCAAGAAACAACTACAAGCTATAGAATTTAACAAAGCTTTACTTGCTATGTACACAAACCAGGTGGG chr4 + 94230402 50727043 50727042 50727224 50727043 50727042 50727224 182 AAGGAATGTAATGAAATCA-----TCTAATCATGTGTGATA-------TTTCCCCAGGACCAAAATGTTTTTGACTCAAAGAAGAAGGTGAAGCTGACCAATGCAGAAGGTGTTGAGCATAAACTCTCCAAGAAACAGCTTCAGGCAATTGAATTCAACAAAGCTTTGCTGGCAATGTACACTAACCAGGTAAG .......:x:x.......x-----...:x.x...xxx....-------:..:x::.............:........x........:.....::.:........:.....x..x...:x...:..:...........:..x..:..x..x.....:...........:..x..x........x........::. 19M5D17M7D146M 141/182 77.5% 182/94230402 0.0% 12/182 6.6% 5756039 NA +8108 chr4 + 190214555 56484727 56484726 56484873 147 ATCTTCTAGGCTGAACAATGCCGCAAAATATCTGCCAGTTTACAGTCCCAAAGTCCCGAGCATCTCTTACCTGTGTTAATCCAAGCTGCCCAGCTCTGCCGTGAAAAGCAGCACACAAAAGCAATAGAGCTGCTTCAGGTAAAATAA chr4 + 94230402 50727617 50727616 50727763 50727617 50727616 50727763 147 ATCCCTCAGGCGGAGCAGTGCCGCAAACTGTCAGCAAGCCTGCAGTCACAGAGCCCTGAGCATCTGCTTCCCGTGCTAATCCAGGCAGCTCAACTGTGTCGTGAAAAGCAGCATACAAAGGCCATAGGGCTTCTGCAGGTAGGTTAA ...::::....x..:..:.........x.:..x..x..::.:.....x..:..:..:........x:.x..:...:.......:..x..:..:..x..:..............:.....:..x....:...x..x......::x... 147M 109/147 74.1% 147/94230402 0.0% 0/147 0.0% 5757110 NA +5117 chr4 + 190214555 56486321 56486320 56486402 82 TTAGGAATTTTCAGATCAGCATCCAGAAAATGCAGCTGAAATTAAGCTGACCATGGCACAGTTGAAAATTTCTCAAGGTATT chr4 + 94230402 50728256 50728255 50728337 50728256 50728255 50728337 82 TCAGGACTTTGCAGAGCAGCACCCTGCCAATGCAGCTGAGATCAAGCTGACGATGGCCCAGCTAAAAATTGCTCAAGGTATT .:....x...x....x.....:..x.xx...........:..:........x.....x...:.:......x........... 82M 67/82 81.7% 82/94230402 0.0% 0/82 0.0% 5758065 NA +7297 chr4 + 190214555 56489383 56489382 56489497 115 TGTAGGTATCTGCATTAGTTACCATGTATAGCCATGAAGAAGATATTGATAGTGCCATTGAGGTCTTCACACAAGCTATCCAGTGGTATCAAAACCATCAGGTAAATAAATGGAG chr4 + 94230402 50730039 50730038 50730153 50730039 50730038 50730153 115 TGCAGGTGTCTGCATTGGTGACGATGTACAGTCATGAGGAAGACATTGACAGTGCAATTGAGGTCTTCACACAGGCTATCCAGTGGTATCAGCAATTCCAGGCAAGTCAATACAG ..:....:........:..x..x.....:..:.....:.....:.....:.....x.................:.................:x.x:x:....:..:.x...:x.. 115M 92/115 80.0% 115/94230402 0.0% 0/115 0.0% 5759344 NA +6727 chr4 + 190214555 56490331 56490330 56490443 113 AGCCAAAATCTCCTGCTCATTTGTCCTTGATAAGAGAAGCTGCAAACTTCAAACTCAAATATGGGCGGAAGAAGGAGGCAATTAGTGACCTACAACAGCTGTGGAAGTAAGCT chr4 + 94230402 50730853 50730852 50730965 50730853 50730852 50730965 113 AGCCAGAGTCTCCTGTCCATTTGTCACTGATAAGGGAAGCTGCCAACTTCAAATTAAAGCATGGCAGGAAGAAAGAAGCAATCAGCGACTTGGAGGAGCTCTGGAAGTGAGTT .....:.:.......::........x:.......:........x.........:.x..::....xx.......:..:.....:..:...:.:x.:x....x.......:..:. 113M 87/113 77.0% 113/94230402 0.0% 0/113 0.0% 5759478 NA +6476 chr4 + 190214555 56490487 56490486 56490661 175 TTGATATGAGGGAGTTACTTGTTTATATTACTTTCTCCAGTTTTATAAACAGTTCAATAATTTTCTTATTTCTTCTTTTA-GACAAAATCCAAAAGATATTCACACCCTGGCACAGCTTATTTCTGCTTACTCACTTGTAGATCCAGAGAAAGCCAAAGCGTATCCTTTTGATTGT chr4 + 94230402 50731500 50731499 50731652 50731500 50731499 50731652 153 TTGGAATGAGTGTGTGACTTGGT-------CTTTCTCT--TTTTGT--------------TTTTTTTTTTTGTTCTCCAAAGGCAAAACCCAAAGGATGTGCACACTTTGGCACAACTCATCTCTGCCTACTCCCTTGTGGACCCTGAAAAAGCAAAAGTGTATCCTTTTAACAGT ...:x.....x.x..x.....x.-------.......:--....:.--------------....:..x...x....::x.-.:.....:.....:...:.x.....::.......:..:..:.....:.....x.....:..:..x..:.....x....:..........:.:x.. 23M7D8M2D6M14D20M1I95M 117/152 77.0% 153/94230402 0.0% 24/152 15.8% 5758987 NA +8723 chr4 + 190214555 56491401 56491400 56491571 171 TTATGTTCCTGAACTCCTGTTCTATCACAGTCTTAGTAAACACTTGCCATCGTCAGATAGTATGTCTCTAAAAGTAGATGTTGAGGCTCTTGAAAATTCTGCTGGTGCTACATACATTCGGAAGAAGGGTGGAAAAGTTACTGGAGATAGTCAACCAAAGGAACAAGGGTA chr4 + 94230402 50732276 50732275 50732443 50732276 50732275 50732443 168 TTGCATTCCTGAACTC---TTCCTTTGCAGTCTTAGCAAGCATTTGCCTTCCTCGGACACCATGTCGCTGAAAGTTGATGTTGATGCGCTAGAGAACTCCCATGGTGCAACCTACGTTCGGAAGAAAGCTGGGAAACTCACTGGAGACAACCAACAGAAAGAGCAAGGGTA ..:::...........---...:x.::.........:..:..:.....x..x..:..:.x:.....x..:.....x........x..x..x..:..:..:xx......x..x...:..........:.x...:...x.:........:.::....x:..:..:........ 16M3D152M 126/168 75.0% 168/94230402 0.0% 3/168 1.8% 5759125 NA +3558 chr4 + 190214555 56493726 56493725 56493808 83 CGTAGTGACACATGTCTATAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....:::..:..--:..:.:.......:...::........x.xx.x...x.............:..x.xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -19539471 -74690931 +3361 chr4 + 190214555 56496858 56496857 56496931 74 GCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCCTGAACCCGGGAGGCCAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::.x....:.:...........::........x.xx.x...x.:.:.......:.:..x::x:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -19536346 -74694056 +10873 chr4 + 190214555 56500500 56500499 56500708 209 TGACACATCTCTCATTTCTTTA---TAATCGTTATGCAGGAAAATTGCCTAAGAATTATGACCCAAAAGTTACCCCAGATCCAGAAAGATGGCTGCCAATGCGAGAACGTTCTTACTACCGGGGAAGAAAGAAGGGTAAAAAGAAGGATCAGATTGGAAAAGGGACCCAGGGAGCAACTGCAGGAGCTTCATCTGAACTGTAAGT---TATTGCT chr4 + 94230402 50732974 50732973 50733188 50732974 50732973 50733188 215 TGACTCCAATCTCATTGCCTGGCACTAACTGTTCTGTAGGAAAGCTGCCCAAGAACTATGACCCCAAGGTAACTCCTGATCCTGAGCGGTGGCTTCCAATGCGAGAACGTTCGTACTATCGTGGACGGAAGAAGGGCAAGAAGAAGGACCAGGTTGGCAAGGGAACTCAGGGTTCAACCACAGCTGGTTCCTCTGAACTGTAAGTACCCATTGCT ....x.xxx.......x.:.x:---...::...x..:......::....:.....:........x..:..x..:..x.....x..:x.:.....x.................x.....:..x...x.:........:..:........:...:....x..:..:..:.....xx....::...xx.x...x..............---:...... 22M3I180M3I7M 161/209 77.0% 215/94230402 0.0% 6/209 2.9% 5767526 NA +10880 chr4 + 190214555 56501682 56501681 56501954 273 AGGGATGCCAGTAAAACTGTGAGCAGCCCACCCACCTCCCCAAGACCTGGCAGTGCTGCAACAGTATCTGCCTCTACAAGTAACATCATACCCCCAAGACACCAGAAACCTGCAGGGGCTCCAGCAACAAAAAAGAAACAGCAACAGAAAAAGAAGAAAGGTGGAAAAGGTGGCTGGTGATGAGAATATTCTTGTTGCAGGCTGTTTTTAAACTAGTGTCAGTGACACTAGGAATATAATAAAGGTAACACAGCAAGAAGCACAGAACTACTC chr4 + 94230402 50733957 50733956 50734217 50733957 50733956 50734217 261 AGGGATGCCAGTAGGACTGCCAGCAGCCCACCTACCTCCCCTCGGCCCGGCAGTGCTGCAGCTGTATCGGC---TGCAAGTAATGTCATCCCTCCCAGGCACCAAAAACCTGCTGGTGCCCCTGCCACCAAGAAGAAACAACAGCAGAAGAAGAAGAAAGGAGGGAAAGGAGGGTGGTAGAAAGCAGA------ATGTGTAATGTGCACACATCAGTA--GGTGATGTTGGTTGCATAATAAAGGTCA-AAAGCAAGTGGTGATGAAAGACTC .............::....:x...........:........xx.:..:............:.x.....x..---.:.......::....x..:..x..:.....:........x..x..:..x..x..x..:........:..:.....:...........x..:.....x..x....::x:..x.x.------x..::x:x...x:x:.x.::...:--:....:::.:.xx::...........x.-.x......x:.::xx...xx.... 71M3D114M6D24M2D28M1D24M 188/261 72.0% 261/94230402 0.0% 12/261 4.6% 5767725 NA +3187 chr4 + 190214555 56504191 56504190 56504273 83 CATGGTGGCTCATGCCTGTAATCCCAGCTACGTGCGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:x..:.--....:.:........x..x:........x.xx.x...x.:........::.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -19529006 -74701396 +9674 chr4 + 190214555 56511177 56511176 56511352 176 TTTCACAGGAGAAA------AACAAGCAAATCCTAGTGCTGGGCCTGGATGGAGCAGGAAAAACCAGTGTCCTGCACTCTCTAGCTTCAAACAGAGTCCAGCACAGTGTGGCACCCACCCAAGGTTTCCATGCAGTTTGCATCAACACTGAAGACAGCCAGATGGAGTTCCTGGAGAGTAAG chr4 + 94230402 50736656 50736655 50736837 50736656 50736655 50736837 182 TTTCGCAGGTGAAGGGAACCAGCAGGCAGATCCTGGTGCTGGGCCTGGACGGGGCGGGGAAGAGCAGCGTGCTCCACTCGCTGGCCACCAACCAGGTGAAGCGCAGCGTGGCGCCCACCGAGGGCTTCAACGCCGTCTGCATCAACAGCGGGGAGAGCCAGATGGAGTTCCTGGAGAGTGAG ....:....x...:------.:..:...:.....:..............:..:..:..:..:.x...:..x..x.....x..:..:x.x...x::..xx...:...:.....:......x.:..:...x.:..x..:..........x:.::..x........................:.. 14M6I162M 134/176 76.1% 182/94230402 0.0% 6/176 3.4% 5774521 NA +3465 chr4 + 190214555 56522285 56522284 56522363 79 GTGGCGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -19510916 -74719486 +9752 chr4 + 190214555 56523695 56523694 56523876 182 AGGATCTTGAAGCAGCCTATCACATTACAGATATCCATGAAGCTTTGGCATTATCTGAAGTGGGAAATGACAGGAAGATGTTCTTGTTTGGAACCTACCTGACTAAGAATGGCTCAGAGATACCCTCCACCATGCAAGATGCCAAAGACTTGATTGCACAGCTGGCTGCAGATGTGCAGTGA chr4 + 94230402 50739685 50739684 50739866 50739685 50739684 50739866 182 AGGACCTCGAAGGTGCATACTGCATCACAGATATCTATGATGCTCTGGCACTGTCTGATATCGGGGACAAGAGGAAGATGTTCTTGCTTGCTACCCACGTGGCAGAAGATGGCTCAGAGATCTCCTCCAGCATGAAGGATGCCAAGGAGTTGATAGCACAGCTGGTTTTGGAAATGCAATGA ....:..:....xx..x..:::...:.........:....x...:.....:.:.....x:.x..::.::.x...............:...xx...:..x..:.x:.::.............x:......x....x.:........:..x.....x..........:.x::..x:....:... 182M 135/182 74.2% 182/94230402 0.0% 0/182 0.0% 5784010 NA +3391 chr4 + 190214555 56540584 56540583 56540682 99 GAATGAAAAAGAAAGAAAGAAAGAGAGAGAAAGAAGGAAAAGAAAGGAAGAAAGAGAAAGAAAGAAAAGAGAGAAAGAAAGAAAGAAAA-GAAAGACAGC chr4 + 94230402 51148380 51148379 51148479 51148380 51148379 51148479 100 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGC ...x...:...xx.x.:...:..............:x.:...xxx:...xx:.:.x::.:x.x.:.::.x....:.:...:..:.....-..::...... 89M1I10M 65/99 65.7% 100/94230402 0.0% 1/99 1.0% 5392204 NA +3683 chr4 + 190214555 56543561 56543560 56543634 74 GTGCACCAGTAGTCCCAGCTACTTGGCAGGCTGAGGCACAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......xx.....:...........:x........x.x::x...x...........:.:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -19489643 -74740759 +3394 chr4 + 190214555 56545593 56545592 56545672 80 CACCTGTAGTCCCAGCTACTCGGGAGACTGAGGCACGAGAATCGCTTGAACTGGGGAGGTGGAGGTTGCAGTGAGTGATG chr4 + 94230402 76033207 76033206 76033286 76033207 76033206 76033286 80 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ...x......:.........:.::..:.....x.x:.x...x.:.......:x:.:..x.xx:..:..:..x:x:..... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -19487614 -74742788 +3337 chr4 + 190214555 56572880 56572879 56572958 79 GTGGTGCACACCTATAATTCTAGCTACTTGGGAAGCTGAGGCAGGAGAATTCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--.:..:...:.........::.:......x.xx.x...x:x...........:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -19460321 -74770081 +3377 chr4 + 190214555 56583134 56583133 56583203 70 CATGGTGGTGTGTGCCTGTAATCCGAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......:::.--....:.:.x.........::........x.xx.x...x.:...........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -19450063 -74780339 +3047 chr4 + 190214555 56589690 56589689 56589734 45 TTGTTGTTTTGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTG chr4 + 94230402 14281221 14281220 14281265 14281221 14281220 14281265 45 TTGTGGGGTTAGGTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTG ....x.xx..:......................xx.......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 42308469 NA +3491 chr4 + 190214555 56589700 56589699 56589770 71 GGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTGTGTGTGGGGGGGTTTTGTTTTTTTGTTTTATTTTTT chr4 + 94230402 54495027 54495026 54495097 54495027 54495026 54495097 71 GGTTTTTCGTTGTTGTTGTTGCTGTTGTGGGGGGGTGTTTGTGTGGGTTTTTTTGTTTTGTTTTTGTTTTT ..x....:.............:....x..xxxxx....x..x.x.......x..x.........xx..... 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% 2094673 NA +3002 chr4 + 190214555 56600055 56600054 56600127 73 GGTGGGAATGTAAACCAGCTAATTTTTGTTTTTCTTTGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT chr4 + 94230402 68974669 68974668 68974741 68974669 68974668 68974741 73 GGAAGAAATACAAATCTACTCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGT ..x:.:...::...:.x:..xx...:....:...xx.x.:..:................x.x::..::.:... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -12374614 -81855788 +3313 chr4 + 190214555 56613868 56613867 56613922 55 TTTGGATAAATTAGCTAACCTCTCTAGGCTTCAATTTTCTCACCTGTAAAATGGA chr4 + 94230402 83501144 83501143 83501198 83501144 83501143 83501198 55 TCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGA .:...::......x:......x.x.:x..:...:.....:............... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -26887276 -67343126 +3157 chr4 + 190214555 56615608 56615607 56615690 83 CATGGTGGCGAGTGCCCGTAATCCCAGCTACTGGAGAGGCTGAGGCAGGAGAATTGCTTGGACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.:--...:.:.........x..:........x.xx.x...x::....:.........x:xx:..:..:.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -19417589 -74812813 +3365 chr4 + 190214555 56634091 56634090 56634159 69 ATCATCATGGTTGAAATAGAAGCCCAGAGAGAAGTAATTGTAGGAAGCCCACAGATGGAGTTGATGGCT chr4 + 94230402 1195829 1195828 1195897 1195829 1195828 1195897 69 ATCAGAATGAGTACAACAAAGGCACAAAGAGAAGTGATTTGTGGAAGCTCACAGATGGAGTTCATGATT ....xx...:x.:x..:.:.:..x..:........:...xxx......:.............x...::. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 55438262 NA +3502 chr4 + 190214555 56638356 56638355 56638481 126 ATTTTGTTTTCATTGTTTGTTGTGGATTAGAATGGGTGAATTTTCTTTTTTTTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTCTTTCTTTCTCTCTTT chr4 + 94230402 86491028 86491027 86491144 86491028 86491027 86491144 117 ATTTTGTTTCCAAGATGT----TGAAACAATATGTTTCAATTTTTTTTTTTTTTT-----TTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT .........:..xx:.x.----..:.x:.:x...xx.x......:..........-----....xxxx..:.::..:.x.x..:.:.........:...:.::.:.::::..:.x...:..:..:. 18M4D33M5D66M 77/117 65.8% 117/94230402 0.0% 9/117 7.7% -29852672 -64377730 +3031 chr4 + 190214555 56638394 56638393 56638489 96 AATTTTCTTTTTTTTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTCTTTCTTTCTCTCTTTCTTGCTCT chr4 + 94230402 83504936 83504935 83505031 83504936 83504935 83505031 96 AATTTCCATTCTCTTTATTATTTTTTTTCCCTGCATATTGACTCTCTGCATTTCTTTCTCCCTGCCTCTTTTCCACTTTCAACTCTTTACTACTTT .....:.x..:.:...x:.x.:...::.:.:.x.x.x:.xx..:...x:x.........::..x:........:x::..:xx......x:.:..:. 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% -26866542 -67363860 +3142 chr4 + 190214555 56638448 56638447 56638518 71 TTTCTTTCTTTCTCTTTTCTTTCTTTCTCTCTTTCTTGCTCTGTCTTTCT-TTCTTTCCTTTGTTTTCTTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT .......::..x..............:.::.::.::.....:xx..:...-..x....:.:...:.x::... 50M1I21M 50/71 70.4% 72/94230402 0.0% 1/71 1.4% -12524899 -81705503 +3239 chr4 + 190214555 56639138 56639137 56639226 89 CTTTCTTTCTGTGAACCTCGTCAGCCTCCCTCTCTCCTCTCTCTCTTTCCTCCTCTTTTGTTTTTTTGTTTTTTTTCCCCCACCATGCA chr4 + 94230402 53757788 53757787 53757870 53757788 53757787 53757870 83 CTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTC------CTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCCACAGTACA ...:.x.::.x.xx.....x.x.::.:...:.:.:..:.:...------..::.:...:x.......x...............x:.:.. 43M6D40M 57/83 68.7% 83/94230402 0.0% 6/83 7.2% 2881350 NA +3126 chr4 + 190214555 56647133 56647132 56647201 69 CAAAAAAAGAAAAAAGAAAAAGAAAAAGAAAAAGAAAAGAAAACAAAGAAACAAGCCTATTTGCTTAAT chr4 + 94230402 55094103 55094102 55094171 55094103 55094102 55094171 69 CAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAACACAAAGATACGCCTATGTCCTAAAT ...::.x.:......:...:.:.:.......x...xx.:......x.:.:.:.x......x.x..x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 1553030 NA +5840 chr4 + 190214555 56648718 56648717 56648811 94 CCTTAGTCTGTGACGGATCTGCACTCTGAGGGCAGGCCTTCTGAGCGCCGCCACTTTGCCAGGCGCTGCTTAAACCATTTCTGGAAGAGAGAAA chr4 + 94230402 50746190 50746189 50746283 50746190 50746189 50746283 94 CTCTAGTCCCTCACAGACCCACATTCTGAGGGCAGCCCTTCAGACTTCCTCCACTCTGCCAGGCGCTGCTTGAACCATTTCTGGAAGGGAAAAA .::.....:x.x..:..:.::..:...........x.....x..x:x..x.....:...............:...............:..:... 94M 74/94 78.7% 94/94230402 0.0% 0/94 0.0% 5902528 NA +3259 chr4 + 190214555 56651805 56651804 56651883 79 AGAACCAATTCCAGTTACATTGTGCTTGAATTGAAGAGAAAGGGAGAGAGAGAAAGAGAGAGAGAGAGAGTGTGTGTGT chr4 + 94230402 4252427 4252426 4252504 4252427 4252426 4252504 78 AAAACAAGAACCAAGTGCACAGCATAAGAATAGGAGA-AAAGGAAGAGGGAGAAAGAGAAAAAGAAAGATTGTGTGTGT .:...x.:xx...:x.:..:x.:::xx....x.:...-.....:....:..........:.:...:...x......... 37M1D41M 55/78 70.5% 78/94230402 0.0% 1/78 1.3% 52399378 NA +9561 chr4 + 190214555 56655636 56655635 56656218 583 GATGGGGGTGGCGGGGAGACC---GGGCGCCCATGGGAGCGGGGAAGCGGGGAGGCGGCGGCGGGAGCCATGCAGGGTCTGG-GCCCCTGGGATGCGGGCAGAAGCGATGGGAGATCATGGGGAGGGCAGCCCGGCGGGA-----GGCGCGGACGAACAGGACCGCCCAGCCGCGAGAAGGCTCAGC-CCAGGCAGGGGTCGGGGCGCGCTGGGCGCGTGTGGGGACGCACCTGGGTCTCCTCCTCGGAAAGGCCTGCCTCGGCCGCGATGAGGCACAGCGTGGTGGAATCCGGGTGCTTGTCGACCTTGTTGAAGTTGTACTCCAGGATTTCCACCTGGTCCTCTGT-GGGGCCGCTCGCGGTCTCCGCCGACATGGTCCCTGCGCGCTGCGGGGCAGGGA------GAAGCGGCGGCGGTGA--GCGAGGCGTGGAGCGGGCGGGACGCAGCGAAGGAAGGCGGTCGCGGCGCCGCCG----GGCAGCCCCAGCCCCAGGCCGCCCCCTCCAGCGGTGCCACGGCCGCGCAAGTCCCCGGTGGCTGCACGCTGAGCGGGGGCTTACGGCTGCCCCCCACCCGGGCCTCCCTCCCTGGACTGAGC chr4 + 94230402 50748193 50748192 50748728 50748193 50748192 50748728 536 GAAGGGAGTATATGGGTGACCAAGGGGTGCAGGTGGTGATGGGGTAGCATGAGAGGTACAGCAGGGAGCTTGTGGGGGCAGAAGATCACAGGGTGTG--------TGATGAAGAACAGAGGACAGGGTAGGCAGGAGGGGTGTAGGGTGCAGAGGCACATGTGGG-------GAGAGCAGGGCCAGTGCCAAGGGGAGGCCGAGGGGTGC-------------ACACTCACCAGGGTCTGCTCTTCAGAAAGCCCGGTCTCAGCTGCAATGAGGCACAGCGTGGTGGGATCAGGATGCTTGTTCACCTTGCAAAAATTGTACTCCAGGATCTCTAGCTGCTCCTCAGTAGGAGTCACTGAC-TTCTCCGTGGCCATTTCTCCTGGATGGTG-GGGTCAGGCACTACAGAAAGGGGCTGGGGTTATTGCCAAGGCTGAGACTGGAGGGACTCTGC------------TTGCTGAGCCCCAGCTTAGGCATCCCTGTCACCA-GCAGCTCCCTCT----------------------TCCCCAGCGGCCTCTGGCCGAGGCAGGGC-----ACAGCTCCTTTCCCAGCCCTGCCCCTCCCGGCAGCGC ..x...:..:xxx...x....---...:..xx:...x:::....x...:x.:::.xx:.:..:..::x.x..::...x.x.:-.x:.x::..:..:.--------:....::::.:x:x..:x....:..x.x..x...:-----..:..:..x.x...x.xxx.-------.x...x...x:...:-...:.x:.:..:..:..x.:..-------------:x..x....x......x...:..:.....x..x.:...:..:..:...................:...x..:.......:x......:x:..:..............:..:.x...x.....x..-..:.:.:..x:.-x......:x.x...xx::....x::.x..-...x....x.------:...x...x.x...x.--..x.:.xx..:::.x..x.....x.x..------------.:..x.x...x.x.----....x...::x.x...-..x..:.....:----------------------.....:.:...:x.xx..:...xx:....-----:.x..:..::x...:.x...x..:.:.:x.:.x.x.. 21M3I58M1I14M8D35M5I20M7D15M1I22M13D125M1I12M1D29M1D10M6I16M2I28M12D14M4I16M1D12M22D29M5D37M 333/513 64.9% 536/94230402 0.0% 93/513 18.1% 5907443 NA +3262 chr4 + 190214555 56662463 56662462 56662516 54 TTCTTTCTTTCTTTCTTTCTTCTTTTTTTTTTTTTTAGACGGAGTCTCATTCTG chr4 + 94230402 90152632 90152631 90152685 90152632 90152631 90152685 54 TTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG .....:....::.:.....:.x.................x.:.:.:...:.x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -33490169 -60740233 +3928 chr4 + 190214555 56686058 56686057 56686183 126 ATTAATGTTAA----TATATATTAATATTAATATATTAATATATAATATAATAATAT---AATATATAATATATAATATAATATATAACATATAATATAATATATAATATAATATATATATAGTATTTTTAAT chr4 + 94230402 53982904 53982903 53983032 53982904 53982903 53983032 129 ACCAATGTTAAACAGTGGAAATAAAAATAAATATAGGAATGTATAAAAGTATAATATGTAAATACATATTACATA---TAAACTATATCATATAGTACAATATATAAAACAA-ATACAGATAATTTCTTTTAT .::........----.:x.x..x..x..x......xx...:.....x.xx.......---....:...x..:...---...xx....x......:..:.........x.:..-...:.x...:.x.:...x.. 11M4I42M3I15M3D34M1D20M 92/122 75.4% 129/94230402 0.0% 11/122 9.0% 2703154 NA +3055 chr4 + 190214555 56688122 56688121 56688167 46 AGGAGGGAGGGAGGAAGGAAGGGAAGGAGGGAGGGGGAAGAGGAAG chr4 + 94230402 36268838 36268837 36268883 36268838 36268837 36268883 46 AAAAGGGAGGGAGGACTGCAGGGAGGAAGGGAGAGGGAAGAGGAGG .::............xx.x.....:.:......:..........:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 20419284 NA +3216 chr4 + 190214555 56696507 56696506 56696585 79 CACGGTGGCAGGCACCTGTCATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCGAGGGAGGGGGGCT chr4 + 94230402 76033197 76033196 76033273 76033197 76033196 76033273 77 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ...:....:--....x...x:.:.........::.:........x.xx.x...x...........::::.xxxx..... 9M2D68M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -19336690 -74893712 +3073 chr4 + 190214555 56707984 56707983 56708054 71 GAATGAAGGAAAGGAGGAAGGGAAGAAGGAAAGGAGAAGGAAGAGAGGAAGAAGGGAAAGTAAGGGAGGGA chr4 + 94230402 32265555 32265554 32265625 32265555 32265554 32265625 71 GAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA .....x.x.x:x:.x......:.::..:..:......:.::..:....:.::.:.....:...x:...::. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 24442429 NA +3300 chr4 + 190214555 56719394 56719393 56719481 88 TCTCTCTCTCTTTCTCTCTGTGCGTGTATGTGTGTTTACATATATATACATAAAAATACACACCATATACTATAT----ATATGTATATACT chr4 + 94230402 60831534 60831533 60831624 60831534 60831533 60831624 91 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT-TTATATGGTCTGTGCGCATGTGTGTATATT .....x.....:..........::.:.......:.x:...:.:::.:..x.xx.......:-::....:x.x.:.----..:...:....:. 61M1D13M4I13M 61/87 70.1% 91/94230402 0.0% 5/87 5.7% -4112140 -90118262 +3186 chr4 + 190214555 56721097 56721096 56721209 113 TCAAATCCTTCCAGTGTTAATATCATCCTT----TAAA--AATGTTTGCCCACTTATTGGGTGTGATA----------------TTATGATTTTATATTTTATATATATATATATATATATATATATATATATAT chr4 + 94230402 35359606 35359605 35359739 35359606 35359605 35359739 134 TTACATCCTTACGCTAATAATTTCTTTCTTCTATTAAACCAATTCATCCTCACTT-TTGTGCATTATAACACAGAATACAGTCTCTGTAATTTGATATTTTATATATAAACATATGTACACATATATACATACAT .:.x......x.:x.:x....x..x.:...----....--...x:x.x.:.....-...x.::.x...----------------:.:.:....x..............x.:....:..:.:.......:...:.. 30M4I4M2I15M1D12M16I51M 82/112 73.2% 134/94230402 0.0% 23/112 20.5% 21361491 NA +3227 chr4 + 190214555 56721179 56721178 56721259 81 TATATATATATATATATATATATATATATATATTTGTGTGTGTGCATATGTGTGTGTGTGTGTGTATGTATGTATATGTTG chr4 + 94230402 5214245 5214244 5214325 5214245 5214244 5214325 81 TGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACATCCTG .:.x.::.:.:.:..x..::.:...::..x.::x........:...x.:.........::..::x....:..:.:..x:.. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 51506934 NA +3036 chr4 + 190214555 56721187 56721186 56721234 48 TATATATATATATATATATATATATTTGTGTGTGTGCATATGTGTGTG chr4 + 94230402 48270741 48270740 48270788 48270741 48270740 48270788 48 TATAAATATGTATACATGTACATATTTGTGTGCATGCATATATGCTTG ....x....:....:..:..:...........::.......:..:x.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 8450446 NA +3188 chr4 + 190214555 56725201 56725200 56725273 73 GTGCACCTGTAGTCCCAGCTAGCTGGGAGGCTGAGGTAGGAGGATCACATGAGCTCAGGAAGTCAAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x......:.......x:..::........x:xx.x.:.x...x...:.:...:.:x.:x:.....:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -19308003 -74922399 +3406 chr4 + 190214555 56729777 56729776 56729863 87 GTGCATGTGGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGACGACTTGAGCCCAGAAGGACAAGGCTGCAGTGAGCCATGATGGCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA .::.:...:..:...........::........x:xx.x.:.xx......:........xx:x:.....:..---:x.......x.. 72M3D12M 59/84 70.2% 84/94230402 0.0% 3/84 3.6% -19303429 -74926973 +3647 chr4 + 190214555 56734556 56734555 56734637 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.::........x.xx.x...x..........::.:..x:xx:.....:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -19298645 -74931757 +3565 chr4 + 190214555 56736446 56736445 56736528 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGATGGGAGGATGGCTTGAGCCCAGGAGTTTGAGACTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x:xx.x.:.xx:.....:.....:..:..x:.:...:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -19296751 -74933651 +3000 chr4 + 190214555 56738915 56738914 56738991 77 TCTCTATTAAAAAAGAAGGAAGAAGAAAGAAGAAAGAAGAAGGAGAAGGAGGAGGTGGAGGAGAAGAAGAGGAAGAA chr4 + 94230402 87343990 87343989 87344066 87343990 87343989 87344066 77 TCTCTCTTAGCAAAGAAGGATAAGAAAAACAGCAAGAAATGTTTGGGAGAGAAAGAGAAGGAAAAGAAAAGGGAAAA .....x...:x.........x:.::...:x..x.....:x:xxx.:::...:.:.x.:....:.....:...:.:.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% -30605075 -63625327 +3541 chr4 + 190214555 56738927 56738926 56739081 155 AAGAAGGAAGAAGAAAGAAGAAAGAA-------GAAGGAGAAGG---AGGAGGTGGAGGAGAAGAAGAG----------GAAGAAGATGAAGAAGAAGAAGAGGAGGA--------GGAGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGA---AATTTAAAAACAGAAAGAA chr4 + 94230402 91771695 91771694 91771880 91771695 91771694 91771880 186 AAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAA ..:.x.......x..x.....x:.:.-------..::..:..x.---....:xx.x....:x..:....----------..:x..:xx..:...::.:x...x.....--------.:.x......:...xx.........:.x:x..:....:..:::...:.---.x.....:.::.::..:.. 26M7I11M3I22M10I29M8I48M3I19M 104/155 67.1% 186/94230402 0.0% 31/155 20.0% -35032768 -59197634 +3024 chr4 + 190214555 56739016 56739015 56739090 75 GAGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAATTTAAAAA-----CAGAAAGAAATGTGGTTG chr4 + 94230402 35548761 35548760 35548840 35548761 35548760 35548840 80 GAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAGTG ....x:........:.x...:.x.:..........x....x...:....:::x.:..-----....:.:.x.x:..:x.. 57M5I18M 53/75 70.7% 80/94230402 0.0% 5/75 6.7% 21190255 NA +4029 chr4 + 190214555 56750012 56750011 56750204 193 CTCAGGTCTATAATTCCAACACTTTGGGAG--------GATGAGGCAGACAGATAACCTGAGGTCAGGAG----------TTCGAGACC-AGCCTGGGCAACTATTAAAAATTATAAAAATTAGCTAGGTGTGGTGGTGCATGCCTGTAGTCCAAGCTACTTGGGAGGCTGAGGCACGAGAATCACTTGAACCTGGGAGGGAGAGGTTGCAG chr4 + 94230402 76033072 76033071 76033277 76033072 76033071 76033277 206 CCCAGGTATGCA-TTTGAGGACATTGGGAACCTGATTTGAGGAAGTAGACTGA-AAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATA--CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....x.::.-..:x.:x..x......:--------..x..:.:....x..-..xxx....x...:..----------..x.:....-:.::....x..x...xx..x:.:..:...:xxx.x..--::::........:.--......:.x.........::........x.x:.x...x..........::.:..xxxx:..:..:.. 12M1D17M8I15M1D16M10I9M1I37M2D14M2D67M 126/187 67.4% 206/94230402 0.0% 25/187 13.4% -19283060 -74947342 +3530 chr4 + 190214555 56750912 56750911 56750994 83 CGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACACGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:......:.x:..--......:.........::.:........x.xx.x...x.........x.:.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -19282285 -74948117 +3046 chr4 + 190214555 56759637 56759636 56759694 58 GTAGCCATTCTTTATTCCTTTACTTTCCTTTCTTTTTTTTTTTTTTTTTTTGAGACAG chr4 + 94230402 14401516 14401515 14401573 14401516 14401515 14401573 58 GTAGCCATAATCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTTAAGAGAG ........xx.::.:.::...x.:::.....:..:.....:..........:...x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 42358121 NA +3637 chr4 + 190214555 56768020 56768019 56768101 82 CATGGTGGTCCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGAAGAGAGGATCCCTTGAACCCAGGAGTTTGAGGCTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::.....x...:--......:.........::::........xxxx.x.:.x.x...........:..:..x:.....:. 14M2D66M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% -19265177 -74965225 +3555 chr4 + 190214555 56769876 56769875 56769957 82 GTGGTGGCACACACCTGTAGCCCCAGCTACTTGAGAGGCTGAGGTAGGAGAATCTCTTGAGCCCGGGAGGTTGATGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x.....::............:........x:xx.x...x.x.....:...:.:..x..x:x....:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -19263325 -74967077 +3391 chr4 + 190214555 56771339 56771338 56771412 74 GTGCACCTGTAGTCCCAGCTACTGGGGAGACTGAGCCGGGAGGATTGCTTCGTCTTAGGAGTTCAGGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::..:.......xx.x.:.x::...x:x.::..:..:.:x......:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -19261865 -74968537 +3441 chr4 + 190214555 56773277 56773276 56773350 74 GTGCCCCTGTAATTCCAGCTACTCAGGAGGCTGAGTCAGGAGAATAGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:...........::::........:.xx.x...xx:...........:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -19259927 -74970475 +3245 chr4 + 190214555 56773386 56773385 56773428 43 TGACAGAGTGAGACTCCCTCTCAAAAAAACAAAAACAAAAACC chr4 + 94230402 61985613 61985612 61985655 61985613 61985612 61985655 43 TAGCAGAATTAGACACCCTCTCAAAAAAACAAAAACAAAAACC .::....:.x....x............................ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -5212227 -89018175 +3071 chr4 + 190214555 56775070 56775069 56775152 83 CATGGTGGCATGCACCTGTACTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAACCTCAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....x.:...........::........x:xx.x.:.x.x........:x::..x.xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -19258127 -74972275 +3283 chr4 + 190214555 56784714 56784713 56784783 70 CATGGTGGCAGGCACCTATAGTCCCAGCTACTTGGGAGGCTCAGGCAGAAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x.:....:...........::.....x..x.xx:x...x.:...........:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -19248483 -74981919 +3266 chr4 + 190214555 56788945 56788944 56789014 70 CATGGTGGCGCACACCTGCTGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:....:--..:x..:.:.........::........x.xx.x...x.........:.:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -19244252 -74986150 +3089 chr4 + 190214555 56789066 56789065 56789112 47 AGAGTGAGATTCTGTCTCAACAAACAAACAAACAAAACAAAACAAAA chr4 + 94230402 44082661 44082660 44082707 44082661 44082660 44082707 47 AGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAA ..:...:.x.......xx..x.....................x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 12706405 NA +3181 chr4 + 190214555 56789652 56789651 56789725 74 GCGCACTTGTAGTCCCAGCTACTCTGCAGGCTGAGGCAGGAGAATCACTTGAACCAACGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:x:x........x.xx.x...x..........x.x:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -19243552 -74986850 +3575 chr4 + 190214555 56797045 56797044 56797116 72 GCACCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.:.........::........x.xx.x...x..:........:.:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -19236161 -74994241 +3750 chr4 + 190214555 56797188 56797187 56797246 59 AAAAAATATATATATATATATATAGAGAGAGAGAGAGAGAGTGTGTGTGTTAGGCAAAA chr4 + 94230402 70951728 70951727 70951786 70951728 70951727 70951786 59 aaagaatagatatTTATATATATAGTGAGAGAGAGAGAGTGTGGGTATGCAAGGCAGAA ...:....x....x...........x.............x...x..:..:x.....:.. 59M 49/59 83.1% 59/94230402 0.0% 0/59 0.0% -14154540 -80075862 +3567 chr4 + 190214555 56797196 56797195 56797264 69 TATATATATATATATAGAGAGAGAGAGAGAGAGTGTGTGTGTTAGGCAAAAAGCCTAGGATGCAATTGT chr4 + 94230402 84631452 84631451 84631516 84631452 84631451 84631516 65 TATATATATATATAGAGAGAGAGAGAGATACAGTGACTATGTCAGACAAAA----CAGGAAGAAATTGT ..............x.............x.x....xx.:...:..:.....----:....x.x...... 51M4D14M 54/65 83.1% 65/94230402 0.0% 4/65 6.2% -27834256 -66396146 +3678 chr4 + 190214555 56803286 56803285 56803368 83 CATGGTGGTGCATGCGTGTAGTTCAAGCTACTTGGAAAGCTGAGGCAGGAGGACTGCTTGAGCCTGGGAAGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........--..........x.........:..:......x.xx.x.:.x::.....:..::.:.:x.:x:.....:.. 12M2D69M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -19229911 -75000491 +3099 chr4 + 190214555 56805152 56805151 56805211 60 AGCCTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAA chr4 + 94230402 76607302 76607301 76607361 76607302 76607301 76607361 60 AACCTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAA .:......:........x....x.:...........:.:::.::.::.xx:.....:... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -19802150 -74428252 +4009 chr4 + 190214555 56805167 56805166 56805261 95 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAAGAAGAAGATTAAAGGGAAAAAACGAATTTTTCAATAAAGAATGA chr4 + 94230402 89501678 89501677 89501772 89501678 89501677 89501772 95 AAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAATTTTCCAGCAGAAGATGA ....x:....x.....:::...:.:...:.:.:.x....:.:.:x.::.::.:.xx:..x.....x........:......:..::.:.::.... 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% -32696511 -61533891 +3013 chr4 + 190214555 56805168 56805167 56805256 89 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAAGAAGAAGATTAAAGGGAAAAAACGAATTTTTCAATAAAG chr4 + 94230402 74764012 74764011 74764100 74764012 74764011 74764100 89 AAATAAATGAGCTAAAAAAAAAAAAAGAAAAGAAAATGGGATAAAACAGTCAGAAATGTAAAGAGTTGAAAACTAGTCCCTCAGTAAAG ...x...x:.:xx.............:.........x:::.x....x.:xx.::..x:.x..::.xx:.....x.:.:::...:..... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -17958844 -76271558 +3120 chr4 + 190214555 56805179 56805178 56805244 66 AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAAGAAGAAGATTAAAGGGAAAAAACGAAT chr4 + 94230402 93207379 93207378 93207444 93207379 93207378 93207444 66 AAACAAAAAAAAAAAAAAAAGGGTAGCAAAATAAAAAAATAAGTGAATTTAGTGGGAACAAAGAAT ...x.................::x..x...:x.......x...x::...x.:x..:..x..x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -36402200 -57828202 +3532 chr4 + 190214555 56810711 56810710 56810789 79 GTGGCACATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGTCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:...........:.........:.xx.x...x.:........::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -19222490 -75007912 +3072 chr4 + 190214555 56811898 56811897 56811964 67 ATTTAATAAAAATATTTTTATTTTCCAGAAAAATTTTTTCTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 + 94230402 28515507 28515506 28515570 28515507 28515506 28515570 64 ACTGACTGAAAATAGT---GTTTTTCAGAAGAGGAATTTCTTTTTTTTTTTTTTTTTATGAGATAGA .:.x.x.:......x.---:....:.....:.:xxx.....................x.....:... 16M3D48M 50/64 78.1% 64/94230402 0.0% 3/64 4.7% 28296391 NA +3449 chr4 + 190214555 56813187 56813186 56813265 79 GTGGCGCATGCTTGTAATCCCAGCTACTTGAGAGGCTGAGACAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.:............:........x.xx.x...x.::.......::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -19220014 -75010388 +3444 chr4 + 190214555 56815571 56815570 56815642 72 GCACCTGTAATCCCAGCTACTTGAGAAGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGCGGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:............:.:......x.xx.x...x.:........::.:.:x:xx:..:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -19217635 -75012767 +3018 chr4 + 190214555 56816760 56816759 56816820 61 TCCAGCTACTTGGGAGGCTGAGTCAGGAGAATCACTTGAACCTGTGAGGCGGAGGCTGCAG chr4 + 94230402 76033217 76033216 76033277 76033217 76033216 76033277 61 TCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ............::........:.xx.x...x..........::x:..x:xx:.....:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -19216457 -75013945 +3757 chr4 + 190214555 56817714 56817713 56817796 83 CATGGCAGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGCAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.::.......--....:.:...........::........x.xx.x...x.:.......:...x..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -19215483 -75014919 +3826 chr4 + 190214555 56823261 56823260 56823363 103 TGCATGGTGGTGCGCACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCATGAGAATTGCTTAAACCCAAGAGGCAGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033195 76033194 76033289 76033195 76033194 76033289 95 TACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:..::.......--..x......:........:..::........x.x..x...x::...:......::..x:xx:..:..:..------:.x...:..... 13M2D70M6D12M 68/95 71.6% 95/94230402 0.0% 8/95 8.4% -19209934 -75020468 +3398 chr4 + 190214555 56825002 56825001 56825075 74 GCGCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGGATCACCTGAGCCTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:..........:::........x:xx.x.:.x...:...:..::.:..x.xx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -19208202 -75022200 +3043 chr4 + 190214555 56827312 56827311 56827361 50 AAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAACCCATTTTCT chr4 + 94230402 94157482 94157481 94157531 94157482 94157481 94157531 50 AAAAAAAAATAATAAAGTAAGAAAAAGAGGAAAAAAGAAACCCAACTCCT .........x..x....x......:.:..:....:.........x:.:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -37330170 -56900232 +3870 chr4 + 190214555 56829933 56829932 56830081 149 CAGTGGCAAGCACCTGTGATGTCAGCTACCTGGGAGGCTGAGGCAGAAGGATCACTTGAGCTCAGAAGTTTGAGGCTGTAG-------TGTAGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGC---GGATCAC chr4 + 94230402 76033199 76033198 76033348 76033199 76033198 76033348 150 CAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGT-GTGCCCTAAGCCTGC--TCCCAGCAT----GGTGACTGCAGAGAGCTTGGGGTCAC ......:--....x...::.x:.......:..::........x.xx:x.:.x.......:.:......:..x:........-------..:x::x.:.:..:-...x.::.x.....:--........:----..x.:...x:.x.:..---..:.... 7M2D72M7I14M1D15M2D9M4D16M3I7M 98/140 70.0% 150/94230402 0.0% 19/140 13.6% -19203266 -75027136 +3361 chr4 + 190214555 56830526 56830525 56830588 63 CAAACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAATTGTAGACCA chr4 + 94230402 44890392 44890391 44890454 44890392 44890391 44890454 63 CAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGCTAAACCA ...:x.............:.:.........::....:.x.x.xx.:........xx..:.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 11940134 NA +3050 chr4 + 190214555 56830529 56830528 56830567 39 ACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGA chr4 + 94230402 75300453 75300452 75300491 75300453 75300452 75300491 39 ACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..x................:...............:.:. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -18469924 -75760478 +3125 chr4 + 190214555 56830530 56830529 56830573 44 CAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAAGAA chr4 + 94230402 47022724 47022723 47022767 47022724 47022723 47022767 44 CAATTAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGTAGAGAA ...xx..............................x.x.:.... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 9807806 NA +3149 chr4 + 190214555 56830531 56830530 56830571 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAAG chr4 + 94230402 13073582 13073581 13073622 13073582 13073581 13073622 41 AAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGAG ...............xx..............:......:.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 43756949 NA +3257 chr4 + 190214555 56830531 56830530 56830565 35 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA chr4 + 94230402 75300457 75300456 75300491 75300457 75300456 75300491 35 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% -18469926 -75760476 +3419 chr4 + 190214555 56831044 56831043 56831104 61 GTGCACCTGTAATCCTAGCTACTCAGGAGGCTGAGATAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.:.......::::........x:xx.x...x.............:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -19202160 -75028242 +3043 chr4 + 190214555 56834791 56834790 56834856 66 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAAACCA chr4 + 94230402 76033197 76033196 76033260 76033197 76033196 76033260 64 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA .:::......--...x......:.........:.::........x.xx.x...x::......x... 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% -19198406 -75031996 +3971 chr4 + 190214555 56837871 56837870 56837953 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGATGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:...........::........x.xx.x...x.:...........:..x.xx:..:..::. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -19195326 -75035076 +3126 chr4 + 190214555 56840122 56840121 56840156 35 TAAAAAAAACAAACAAACAAACAAAAAAAAACCCA chr4 + 94230402 38080839 38080838 38080873 38080839 38080838 38080873 35 TAAAAAAAACAAGCAAACAAACAAAAAAAAACCCA ............:...................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 18759283 NA +3384 chr4 + 190214555 56848761 56848760 56848838 78 TGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:--......:.........::::........x.xx.x...x.:......x....:..x:xx:..:..:.. 9M2D67M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% -19184441 -75045961 +3113 chr4 + 190214555 56850707 56850706 56850781 75 ATGGGCAACAGAACGAGACTCCATCTCAAACAAAAGAAAACAAACAAACAAACAAAACAAAAAATTAAACAGTCT chr4 + 94230402 91541685 91541684 91541759 91541685 91541684 91541759 75 ATGAGTGGTAGGAAGAAAAAACATTTAAAACAAAAAACAACAAACAAACAACAACAACAACAAAATCAGTAGTCT ...:.::::..:.x..:.xxx...:.x........:.x.............xx.x.....x...x.x.::..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -34690978 -59539424 +3248 chr4 + 190214555 56851835 56851834 56851904 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:.........:x::........x.xx.x...xx..x.........:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -19181362 -75049040 +3094 chr4 + 190214555 56852989 56852988 56853062 74 GCGCACCTGTAATCCCAGCCACTTGGGAAGCTGAGGCAGGAGGATATCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:.:.....:.....::.:......x.xx.x.:.xxx...........:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -19180215 -75050187 +3203 chr4 + 190214555 56862840 56862839 56862909 70 TTGTTGTTGTTGTTGTTGTTGTTTGAGATGGAGTCTTGCTCTGTCACCAGGCTGGAGTGCAGCGGCAGGA chr4 + 94230402 74354151 74354150 74354220 74354151 74354150 74354220 70 TTGTTGTTGTTGTTGTTATTACTAGAGATGTAATTTTCCTCGTACATCAGACGGAAAAACAGTTGCAGAA .................:..::.x......x.:.:..x...xxx..:...:.x.:.:x:...:x....:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -17491311 -76739091 +3673 chr4 + 190214555 56868173 56868172 56868273 101 CACGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAGGCGGAGGTTGCAGTGAGCCGACACAGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:....--..::.x....:.:...........::........x.xx.x...x.:.......:...:..x:xx:..:..:..------:...:::..... 8M2D73M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% -19165024 -75065378 +3111 chr4 + 190214555 56868644 56868643 56868728 85 ACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGCTACATTTTAACATTTAAAGTAAAAGATTTTTGGGTGGGTGCAATGACT chr4 + 94230402 55937146 55937145 55937230 55937146 55937145 55937230 85 ATTTTTTCTCAGAAAAAAAAAAAAAAGGAAAAAAGGTTGCATTTGCATGTGCAGTGGAGAAAAACTTCTACTGGCAGTAATGTCT .:.:.x.....:..............::......:.:.:.....xx.::.x:.:x.x.:..:.x:..:x:x...xx.:....x.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 931498 NA +3379 chr4 + 190214555 56891251 56891250 56891316 66 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x....:.:...........::........x.xx:x...x.:.........:.:.. 6M2D58M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -19141950 -75088452 +3204 chr4 + 190214555 56894349 56894348 56894418 70 CATTGTGGCACAAGCCTGTAATCCCAGCTACTTGGAAGGTTGAGACAGGAGAATCGCTTGAACCGAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:x....::..x.--....:.:...........:....:....x.xx.x...x.:........x..:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -19138848 -75091554 +3419 chr4 + 190214555 56896277 56896276 56896359 83 CATGGTGGCTCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTGTGAACCCGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:x....--......:...........::........x.xx.x...x.::x.......:::..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -19136920 -75093482 +3177 chr4 + 190214555 56901039 56901038 56901112 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACATGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx:x...x.:.......x::.:..x:xx:..:..... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -19132165 -75098237 +3029 chr4 + 190214555 56914846 56914845 56914941 96 GCCTGGCCTGGTTT------ATTTGGTCTTAATGCTTATTTT-----TCCCCAGTATTACCTTCATTCTGATTTTTTTTTTTTTTAACTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72188177 72188176 72188283 72188177 72188176 72188283 107 GTCTGACATGTTTTCTCCTGATTTTCTCTGAAGATTTGCTTTAATGTTTCTCTATGTAACTTCCTTTCTGGGTTTCTCCTCTCTGCACTTTTTTTTTTTTTTTTTTT .:...:.x..x...------....xx...x..x::..::...-----.:.:.x:.:.x..:.:.x.....:x...:.::.:.:.xx..................... 14M6I22M5I60M 66/96 68.8% 107/94230402 0.0% 11/96 11.5% -15273331 -78957071 +3291 chr4 + 190214555 56914870 56914869 56914941 72 AATGCTTATTTTTCCCCAGTAT-------TACCTTCATTCTGATTTTTTTTTTTTTTAACTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33538529 33538528 33538607 33538529 33538528 33538607 79 AATCCATAATATCCCCCATCATGTTCCCTTAACTTCGTTCTAATTTTCTTCTCTTTTAGCCCTCCTTTTTTTTTTTTTT ...x.x..x.x.:.....x:..-------..x....:....:.....:..:.:.....:.::.::.............. 22M7I50M 54/72 75.0% 79/94230402 0.0% 7/72 9.7% 23376341 NA +3025 chr4 + 190214555 56922290 56922289 56922342 53 ATTATTATTATTATTATTATTATTACTTTTTTTTTTTTTCTGAGATGGAGTTT chr4 + 94230402 47356818 47356817 47356870 47356818 47356817 47356870 53 ATCATTGTTATCATTATTATAATTACTTTTTTTTTTTTCTTCTGGTAGCATTT ..:...:....:........x.................::.xx.:.:.x:... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 9565472 NA +3131 chr4 + 190214555 56938261 56938260 56938318 58 AAGAAAGTGGTGGCTTTTTTTTTTTTTTCTTTTTTTTCTTTTTGAGAACGGAGTATTG chr4 + 94230402 21162757 21162756 21162814 21162757 21162756 21162814 58 AAGAGAGTGGTGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTGAAGACAAAATGGTG ....:........x.......x....x.:..x.....x.......::..::.:.:x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 35775504 NA +3448 chr4 + 190214555 56944780 56944779 56944853 74 GTGCGCCTGTAGTCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.....:.....::........x.xx.x...xx:.........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -19088424 -75141978 +3484 chr4 + 190214555 56945256 56945255 56945334 79 GTGGTGAGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x......:.........::::........x.xx.x...x.:........::.:..x.xx:..:..:.. 6M2D71M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -19087945 -75142457 +3084 chr4 + 190214555 56965749 56965748 56965874 126 AGTTTATACAACTTTTTGCAACAATGTCACTATTGGGCACTCAAAATGTGGCTGGTGACACTAAGCAACCATATTTTAAATTTTCCCTTTTTTTTTTTTTTTTTTAGAGACAGGGTTTCACTCTGT chr4 + 94230402 76422633 76422632 76422754 76422633 76422632 76422754 122 AGTTTATCCTATAGAGTGCAATGCTGT-ACCAAAAAGCAGATGAATTTTGAGTGGTG---TAAAGAACCCATATTCTAAATAATCCTTTTTTTTTTTTTTTTGCTAAAGAAAAATCTTTGCTGCGT .......x.x.:xxxx.....::x...-..:.xx::...xx::..x.x..:x.....---:x...x.x.......:.....xx...:...............x:..:...x.::x:..::..x:.. 27M1D29M3D66M 79/122 64.8% 122/94230402 0.0% 4/122 3.3% -19456884 -74773518 +3008 chr4 + 190214555 56967379 56967378 56967440 62 CAAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAACCAACCCCAAAAGCAAAAAACCAACA chr4 + 94230402 43748474 43748473 43748535 43748474 43748473 43748535 62 CAACAAAAAACAACAACAAAACAAACAAACAAAAATATCCACCCAGAACCAAAAACCAAACA ...x......x.....x........x.........xx:xxx....:..x......x.x.... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 13218905 NA +3653 chr4 + 190214555 56969441 56969440 56969514 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.xx.x...x........:..:.:..x:xx:..:...:. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -19063763 -75166639 +3302 chr4 + 190214555 56979768 56979767 56979828 61 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCCGGACGATCGCTTGAGCCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:.........:.::........x..x.xx:.x.:.....:.....:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -19053436 -75176966 +3231 chr4 + 190214555 56987960 56987959 56988047 88 GTGCCTATATAGTCCCAGCTACCTGGGAGGCTGAGGCAGAAGGATCACTTGAGCTCAGGAGTTTGAGTGTTGCCTGGGTAACATAGTG chr4 + 94230402 76033204 76033203 76033286 76033204 76033203 76033286 83 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT-----TGGGCTGTAGAACATGATG ....x::.:....:........:..::........x.xx:x.:.x.......:.:...:..:..-----.x.x...x:x.....::.. 64M5D19M 57/83 68.7% 83/94230402 0.0% 5/83 6.0% -19045244 -75185158 +3045 chr4 + 190214555 56992336 56992335 56992407 72 GCACCTGTAGTCCCAGCTACTAGGGAGGCTGAGACAGGAGAATTGCTTGAACGTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.xx.x...x::.......x::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -19040870 -75189532 +4581 chr4 + 190214555 56993169 56993168 56993245 77 GTGGTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.x......:...........::........x.xx.x...x.............:..x.xx:.....:.. 77M 61/77 79.2% 77/94230402 0.0% 0/77 0.0% -19040032 -75190370 +3131 chr4 + 190214555 56994887 56994886 56994957 71 AAAATTACA-------AAATGGTAGTTAAAATTTAGTTTAAAGTTGAAATGAAAAAAAAAAAAAAAAGAAAGAAAGAT chr4 + 94230402 8770821 8770820 8770898 8770821 8770820 8770898 78 AAAACTACACTGAAACAATCAGTTTTCAAACCTAAGTATAAAGTGAAAATGATAAAAGAAAAAAAAAGAAGAAAAGAT ....:....-------..x::..xx.:...x:.x...x......x:......x....:............::...... 9M7I62M 54/71 76.1% 78/94230402 0.0% 7/71 9.9% 48224066 NA +3714 chr4 + 190214555 56996197 56996196 56996278 82 TTTCAGTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATATATATA chr4 + 94230402 85834529 85834528 85834610 85834529 85834528 85834610 82 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...:x:.....x.....x.................:.xx:....x.:...::.:...:x:.:::...x...::.:.:...:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -28838332 -65392070 +3123 chr4 + 190214555 56996198 56996197 56996275 78 TTCAGTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 79265508 79265507 79265584 79265508 79265507 79265584 77 TTCAGTCAACA-GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ......:x.::-.............::........xx...:...::...:::.....:::::.::x.:....x.:.:. 11M1D66M 51/77 66.2% 77/94230402 0.0% 1/77 1.3% -22269310 -71961092 +3151 chr4 + 190214555 56996207 56996206 56996279 73 TGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.................:.--:...:x.:..::......:x:.:::...x.:.::.:.:...:.:.:.. 25M2I48M 50/73 68.5% 75/94230402 0.0% 2/73 2.7% -28838334 -65392068 +3227 chr4 + 190214555 56996212 56996211 56996277 66 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx.....:..:..::::.....:::::.:.x.:....x.:.:. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -22269307 -71961095 +3577 chr4 + 190214555 56996227 56996226 56996313 87 TGTGTGTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTG chr4 + 94230402 34522012 34522011 34522098 34522012 34522011 34522098 87 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTTAAACAGAGTCCTG ...........:.:.......:.:::::x:x:xx.xx..:......x..:.:....x....x.x..x......x.:..:.....:.. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 22474215 NA +3163 chr4 + 190214555 56996247 56996246 56996300 54 TGTGTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 23522764 23522763 23522817 23522764 23522763 23522817 54 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTG ..x.x..::........:...............x..::....::.x.....:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 33473483 NA +3186 chr4 + 190214555 56996248 56996247 56996299 52 GTGTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522769 23522768 23522820 23522769 23522768 23522820 52 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTT ..::..........:...............x::....::.x.....:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 33473479 NA +3081 chr4 + 190214555 56996249 56996248 56996299 51 TGTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251053 33251003 33251002 33251053 51 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATT .............:.....:.:........xxx.....x...x.....x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 23745246 NA +3363 chr4 + 190214555 56996250 56996249 56996297 48 GTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522769 23522768 23522816 23522769 23522768 23522816 48 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCT ..::...........................::....::.x.....:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 33473481 NA +3249 chr4 + 190214555 57003290 57003289 57003372 83 CATGGTGGTGTGCGCCTGTTGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::..--...x..:.........::::........x.xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -19029907 -75200495 +3106 chr4 + 190214555 57054510 57054509 57054585 76 GTGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGAAGAATTGTTTGAACCTGGGAGGCGGAGGTTGCAGTGCA chr4 + 94230402 76033206 76033205 76033281 76033206 76033205 76033281 76 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA .::.x......:...........:.........x.xx:x...x:::.......::.:..x:xx:..:..:..x:.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -18978696 -75251706 +3049 chr4 + 190214555 57054629 57054628 57054668 40 CTCTCTCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 + 94230402 68015452 68015451 68015491 68015452 68015451 68015491 40 CTCTCTCTCACAAAAAAACAAAAAAAAAGAAAGAACAGAA ..................x.........:...:..x.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -10960823 -83269579 +3391 chr4 + 190214555 57060788 57060787 57060861 74 GTGCACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGGATTGCTTGACCCTGGGAGGTCAAGGCTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::.:........x.xx.x.:.x::.....x..::.:..x.:x:....::.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -18972416 -75257986 +3893 chr4 + 190214555 57060923 57060922 57060995 73 TGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGGATTGCTTAAACCCAGGAGTTTGAGGCTGTAGTGCCTG chr4 + 94230402 76033211 76033210 76033283 76033211 76033210 76033283 73 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATG ......:.........:..:........x.xx.x.:.x::...:.......:..:..x:........x:.x.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -18972288 -75258114 +4671 chr4 + 190214555 57078212 57078211 57078306 95 TTAACCCTCACGACAGCCCTGTGAGGTTCGTACTGTCTCCTATTTTACAGA-GGAGGAAACTGAGACACAGAAAGGTCGAGTAACTTGCCCAGTGC chr4 + 94230402 93120850 93120849 93120945 93120850 93120849 93120945 96 TTAAACCTCACAACATCCCTGTGAGGTAGGTATTACCCCCCATATTACAGATGGGGGGAACTGAGGCACAGAGAGACGCAATGGCTTGGCCAAGGC ....x......:...x...........xx...:.::.:..:..x.......-..:..:.......:......:..::xx.:.::....x...:x.. 51M1I44M 70/95 73.7% 96/94230402 0.0% 1/95 1.1% -36042638 -58187764 +3070 chr4 + 190214555 57114247 57114246 57114306 60 TAAGCTCTCACCCCAAACCTGTTTATATGTGCCTGTGTGTGTGGGGGGGTGGGG-----GGATGG chr4 + 94230402 72880448 72880447 72880512 72880448 72880447 72880512 65 TAAACTGTAACTTCATACATGTGTATACGTGCCTGTGTGTTTTGAGGGGTGGGGACAGTGGATGG ...:..x.x..::..x..x...x....:............x.x.:.........-----...... 54M5I6M 48/60 80.0% 65/94230402 0.0% 5/60 8.3% -15766201 -78464201 +3745 chr4 + 190214555 57118687 57118686 57118758 72 GCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:............:........x.xx.x...x::.........x.:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -18914519 -75315883 +3448 chr4 + 190214555 57137924 57137923 57138013 90 GCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCTTGAACCTGGGAGGTGGAGATTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.............::........x.xx.x...xx:........::.:..x.xx:.::..:..------..x..x...... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% -18895282 -75335120 +3606 chr4 + 190214555 57152990 57152989 57153072 83 CATGGTGGTATGCACTTGTAGTCCTAGCTTCTCAGGAGGCTGAGGCAAGAGGATCACTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--....x......:.:....x..::::........x.xx.x.:.x.......:.....:..x.:x:.....:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -18880207 -75350195 +3084 chr4 + 190214555 57163520 57163519 57163568 49 TGTTTTAAGATGAAAAAATTCATGACCAATTTCCAGAACCTCAAAACAC chr4 + 94230402 87811073 87811072 87811121 87811073 87811072 87811121 49 TGCTTTAAGATGAAAAAATGCAGTACCCATTTCCAGTACCTCAATATAC ..:................x..xx...x........x.......x.:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -30647553 -63582849 +3234 chr4 + 190214555 57168191 57168190 57168250 60 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAAAATCACTTGAACCTGGCAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x......:.........:.::........x.xx:x:..x..........::.x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -18865014 -75365388 +3414 chr4 + 190214555 57183774 57183773 57183844 71 ACTCCATCTCAAAAAACAAACAAACAAACACACACACACACACACACACACACACACACAAACCCACAACA chr4 + 94230402 26446820 26446819 26446890 26446820 26446819 26446890 71 ACCTCACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACACCCCCCAAAACCCTCCACA ..::..:.x.......x..x....x..x.xx...x..................x.x.xx......x.x... 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 30736954 NA +3585 chr4 + 190214555 57189920 57189919 57190002 83 CATGGCGGCGCTCACATGTAGTCCCAGCTACTTGGGAGTCTGAGGCAGGAGGATTGCTTGAGTCCAGGAGGTCGAGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:..:..--..:......:...........::..x.....x.xx.x.:.x::.....::....:..x.:x:........ 11M2D70M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -18843277 -75387125 +3063 chr4 + 190214555 57215501 57215500 57215549 49 TGTGTGTGTGTGCGTGTGTGTGAGTGTGTGTGCGTGTGTGTATGCACAC chr4 + 94230402 79265520 79265519 79265568 79265520 79265519 79265568 49 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACAC .............:........:x...:.:.:.:.::::..:....... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% -22050019 -72180383 +3068 chr4 + 190214555 57227566 57227565 57227641 76 CTTTTTGTTTCACTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTCATTTCATTTTGTTCTGTTCT chr4 + 94230402 65924229 65924228 65924304 65924229 65924228 65924304 76 CTGTGTGTTTTGCTGGTCTTTTTTTATTTTTATTTTTTGCTTTGATTTTTGATTTCTTACAGATTTCTTTTGTTTT ..x.x.....::.....:.......x.....x......x:...xx....x.x....x.x:x:x...x..:....:. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -8696663 -85533739 +3416 chr4 + 190214555 57234916 57234915 57234999 84 CACTGGCCAAATTGTTAACCTTTGTGCTTCAGG---------GTTTTTTTATTTTTTATTTTTTAGACAGGGTTTCATTCTGTCACCCAGGCT chr4 + 94230402 28380362 28380361 28380454 28380362 28380361 28380454 93 CACTACTCTGTTTGTGAGTGTTTTCTCTTTAGGAGTGAAGGTGTGTTTTGATTTTTGATTATTTAGATATGGTTTCATTCTGTCACCCAGATT ....:x:.x:x....x.::x...x:x...:...---------..x....x......x...x......:.x....................::. 33M9I51M 62/84 73.8% 93/94230402 0.0% 9/84 10.7% 28854554 NA +3364 chr4 + 190214555 57266659 57266658 57266782 124 AAGGAGAAAAAGAAAAGAGAGTGAATGAGAGACAGAGAGAGAAACAGACAGAGAGAGA--------CTGAGGAGGAGCCTATGTAGGTTTCTACCATCTCAA--GGTGAC----CGCCAATAGGCCTTTGATAAACGT chr4 + 94230402 62475714 62475713 62475844 62475714 62475713 62475844 131 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAGCCATCCTAAGGATA-------GTGGGTTTAACTCATGTCAGATGGTGAAATTGCACTTACATGCCTTTGAAAAAAGT ..:::......:...:.:.:.x..........x.............:.x:.:x:.:..--------..:....x:-------..:.....xxx:...x...:--.....x----.:.:x.:.x........x...x.. 58M8I9M7D20M2I6M4I24M 83/117 70.9% 131/94230402 0.0% 21/117 17.9% -5209055 -89021347 +3218 chr4 + 190214555 57281231 57281230 57281288 58 ACAGAAAAAAGCAACCAAACAAACAAAAAAAACACAACAAAATAGGGGCAAAGAGAGT chr4 + 94230402 77919158 77919157 77919215 77919158 77919157 77919215 58 ACAGCAAAAAACAAACAAACAAACAAAAAAAACCCAACAAATTGTGCAGAAAGATAAT ....x.....:...x..................x.......x.:x.x:x.....x.:. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -20637927 -73592475 +3026 chr4 + 190214555 57305694 57305693 57305754 61 ATATTGCTGTACCAAATAGATCTCCTATTCTTTGCTTTCTTTCTTTTTCTTTCTTTTTTTT chr4 + 94230402 22578356 22578355 22578416 22578356 22578355 22578416 61 ACATTGCTGTAGAATATAGAACTCCCCATATTAGCACTCTTTCCTTTCTTTTCTTTTTTTT .:.........xx.x.....x....:xx.x..x..x:......:...::............ 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 34727338 NA +3131 chr4 + 190214555 57309605 57309604 57309653 49 TGTGTGTGTGTGTGTATATATATGTATATATATAACTTCCT---CCAATCTA chr4 + 94230402 64826660 64826659 64826711 64826660 64826659 64826711 52 TGTATGTGCGTGTGTATGTATACGTATATATGTAACTTTCTGGGCAAATCTA ...:....:........:....:........:......:..---.x...... 41M3I8M 42/49 85.7% 52/94230402 0.0% 3/49 6.1% -7517055 -86713347 +4044 chr4 + 190214555 57317162 57317161 57317241 80 AGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTACAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:.--......:...........::........x.xx.x...x.:...........:..x.xx:..:.::.. 11M2D67M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% -18716038 -75514364 +3727 chr4 + 190214555 57326137 57326136 57326274 138 TGGCTTGAGAAGA-----------GATGGAGAGTAAAGTGGAAATACATTCTTCAGTTCAATGAGAGTACTACAA-AGACCATAGGTTTTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAACCCCAA chr4 + 94230402 38617388 38617387 38617529 38617388 38617387 38617529 142 TAACTTGAGAGGATCTGCGAGGGTGATGGAGGACAGAGCTGGAATTCAGGCATCAG--AACTGAAAGATTTACAAGAGTTCAGAAGT------GGAGAAACAATCAGGAAAAAAAAAGTTAAAAAAAAAAAAAGATGGAAAAAACCCTAA .::.......:..-----------.......:::.:..:x.:...x..xx.x....--x.x...:..xx:.....-..x:..x.:..------.:.:...x..xx.::.........:xx.............:.x.:.........:.. 13M11I32M2D17M1I11M6D57M 92/130 70.8% 142/94230402 0.0% 20/130 15.4% 18708749 NA +3005 chr4 + 190214555 57326168 57326167 57326257 90 AATACATTCTTCAGTTCAATGAGAGTACTACAAAGACCATAGGTTTTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 65032882 65032881 65032971 65032882 65032881 65032971 90 AATGCATCTTAAAAAAAAACAAAAACACCACCAAAACAACAGATTTCAAAGTATATAATAAAAAAAAAAGAAAAAAAGAAAAATCAGAAA ...:...::.xx.:xxx..::.:.::..:..x..:..x.:..:...:x.x.x.x.x..x..........:.......:.....xx.:... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -7706714 -86523688 +3043 chr4 + 190214555 57326204 57326203 57326298 95 CCATAGGTTTTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAACCCCAACAGAATAAAGAGCAGATAAGAGAT chr4 + 94230402 6985091 6985090 6985185 6985091 6985090 6985185 95 CCATAGGTTTCTATTAAAAAAAAAAGAAGAAAAAGGAATTGAGGAGAAAAGAGTAAACATTTCAGCTCCACCATGAAAGCATGAAGGTGAAACAT ..........:...x..........:..:.....::..xx:.::.:....:.:x...x.xxxx.:.:...x..x:.x.:x:x.x..:.:.:.x.. 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 50341113 NA +3207 chr4 + 190214555 57329661 57329660 57329711 51 AAAAACAAAACAAAACAAAACAAAACAAAATCCTGAACCCTACGACATCTC chr4 + 94230402 65959265 65959264 65959315 65959265 65959264 65959315 51 AAAAAAAAAACAAAACAAAAAAACACAAAACTCTGAGCAGTACAACATCTC .....x..............x..x......::....:.xx...:....... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -8629604 -85600798 +3094 chr4 + 190214555 57339132 57339131 57339234 103 TCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCTTCCTTTCCTTTCCCTTCTGTTCCTTTCCTTTCCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCC chr4 + 94230402 929193 929192 929295 929193 929192 929295 103 TCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCC ........x.::..:..:::...:.x.:::.:.x.x.x.x...x:..x:..x.:.x::::...:.xx...x.:.:........::x:..x::.:......:.. 103M 60/103 58.3% 103/94230402 0.0% 0/103 0.0% 56409939 NA +3302 chr4 + 190214555 57339190 57339189 57339295 106 GTTCCTTTCCTTTCCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCTTCCTTTCCCTTCCTTTCCTTTCCTTTCCC chr4 + 94230402 929191 929190 929296 929191 929190 929296 106 GCTCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCCC .:........x.::.::..:::...:.x.:::.:.x.x.x:x...x:..x:..x...x:.x:...:.xx...x.:.:.........:x:..x::.:......:... 106M 63/106 59.4% 106/94230402 0.0% 0/106 0.0% 56409999 NA +3059 chr4 + 190214555 57339202 57339201 57339304 103 TCCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCTTCCTTTCCCTTCCTTTCCTTTCCTTTCCCTTCCGTTCC chr4 + 94230402 929193 929192 929295 929193 929192 929295 103 TCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCC ...:....x.::..:..:::...:.x.:::.:.x.x.x:x...x:..x:..x...x:.x:.....xx...x.:.:........::x:..x::......x.:.. 103M 61/103 59.2% 103/94230402 0.0% 0/103 0.0% 56410009 NA +3457 chr4 + 190214555 57339257 57339256 57339359 103 TCCTTTCCCTTCCTTTCCCTTCCTTTCCTTTCCTTTCCCTTCCGTTCCTTTCCCTTCCGTTCCTTTCCTTTCCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCC chr4 + 94230402 929193 929192 929295 929193 929192 929295 103 TCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCC ........x.::..:..:.:...:.x.:::.:.x.x.x.x...::..x:..x.:.x:.::...:.xx...x.:.:........::x:..x::.:......:.. 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 56410064 NA +20516 chr4 + 190214555 57355163 57355162 57355667 505 GCCCTATTGCTGATTCCAGGCAGCATAAACTTTGTACAGCTGACATTTTCTGACTCAACTCCTGCTATAATTGAAATTACTTTATTAAACAAGCTTGAATCATTTCAATTACTTCGTGGCCTGGAGTGCTGTTGGCGTACATGATGACTACATGCTGATTAAATTAGAGCTCGTACACCCCAGAAAGATGTGCATACCAGCAAATGGCTTTCTCTTTCTTCAGTATAAAAAAAAGCTCTCTCTAATTCATATTCACTGGATAGATCCCTTTGGGTGGTATATTAATATTCATAAGATAAACCACATAGCTAAAGCAGAAAATTAAAGTCAAGTCTCTTAATAAAGAAGCAAGAGTAATGACTACAGTAAAATCTCCAAAAATGCCATTATCCCTGTGAAGAGTGAACACTACTACTGTACATGTGTTGAAACTGAGCAAGAGAACAATAAAAAGTGAATTATTGCAGTGATTTGGATTTTAAAATCCGCTAGAGAGGAATGAGCA chr4 + 94230402 48471305 48471304 48471770 48471305 48471304 48471770 466 GTCCAGCTGTGTATTTCAAGCAGTATAAACTTTACACAGTTGACATTTTCTGGCTCAATTTCTGGCACAACTGAAATTACTTTATTAAACAAGCTT--------------------TTGCCTCCAGTGCTGGTG--TTATGTGTTCACTAGATGCTGATTAATTTAGAACCCATGTCCCTCTGAAAAACAATTCTCCT--TAAATGGCTTTCTATTTTTTTTTT-----AAAGTCTTCCCTTTAATTCATATTCATGAGATAGAGCCCTCTGGGTTCTATATTAATATTCATATGATGAACCTCATGGCTAA---AGAAGATTAAATTTGGATCTGTTAATAAAGAAGTA----TAACGACTTAAGTAAAATCTTCAAAGATGCCATTATCCTCCCTCCGAGTGAG---TATTGCTGTATGTATGTTGATGCTGAGCAAGAGAACAATATCAAATGAGTAAATGCTGTCATTTAGACCATCATATCCACAGGAGAGGTTTGAGCA .:..x::..:xx...:..:....:.........::....:............:.....:.:...x:.:..:.........................--------------------.x....xx.......x..--x..::..x.x....x...........x.....:.:.:.::x..:.x....:.::xx:x.x.:--:............x...:..:xx.-----...:xx:..:..:.............:x:......x....:.....xx................x...:....x...:.....---....:......x.::::...x............:.----...:....xx..........:....:............::x:xxx......:---..:.:.....::.:......x:..................xx..:...:.x.x...x..x....:..::x.x.x....:.x:......xx...... 96M20D18M2D62M2D24M5D83M3D35M4D52M3D96M 348/466 74.7% 466/94230402 0.0% 39/466 8.4% 8883858 NA +6562 chr4 + 190214555 57376372 57376371 57376569 198 TCTCTCTCTCTTGCTCTGTGTATTTCTCTTCCTCTCTCTCTCTCTGCTTTTCTCTCCATCTCTATATA-TGTATATGTATAATATG-TATATATAACACATATATAGATAAAGATAGATAGTTGGAAAATATCTCT-CTCTATAGGAAATTTTATATATATATAT-------------------ATATATATATATATATATATATATATATATATATAA chr4 + 94230402 4618342 4618341 4618555 4618342 4618341 4618555 214 TTTTTCTTTCTTGTGCCTT--ATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATA-ATACGGAGATAGATA---AGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatataA .:.:...:.....:x.:x.--..:.......................:.x.x:x.x:...........-.:..x..:...x....:-.....:.x::..xx...-.x.:::.........---:.:.xx.....x.-..:::..xxxx...x.............-------------------...:.......:............:...:....... 19M2D47M1I17M1I17M1D15M3D13M1I28M19I36M 145/192 75.5% 214/94230402 0.0% 28/192 14.6% 52758030 NA +23711 chr4 + 190214555 57415603 57415602 57416020 418 AAGTTGAATGAATCCCTAAAAGGCATATTTTACTTGAAAAACATGCATTATG----CTCTTTTCCAAGTAAACTGCACAGAAAAATGTAAATGAAGCATGAAGCTCTTATGAATTAGACCCTAAGCATTTTTCTTTTTAGCATATAAACTGCCACTAAGGATGTGATAGGAATGCATTTTCCACTATTTTTCAAACTGTAATTACATTTCCCTAGTAAAACTCAAATACTTGATATGGTCCTGTTGCAACTGTACCAGACAGGTAATAATTGGAAAATTTAACATAG-AGCTTTATCTCTTAAATGTTAAAAGGTAGGGCTACTCACAGCATACAGAAGAGATGGCATTTGATTC-AAAAGCTGTGAACCTGGTGATTCTCTATAATATTAATTTTGCATCTGGAAATATGTTCCAAAGCTGTA chr4 + 94230402 48479050 48479049 48479454 48479050 48479049 48479454 405 AAGTTGAATGGCTCACCAAAATTCATATTTTGCTTCAAAGGCACACATTATTTATCCACTTTTCCAAGTAAACTGCATGGAAAAATGTAAATGAAGCATAAAGCTCTTATGAATTGAGCCCTAAGCATTTTTCTTTTTAGCATATAAACTACTAGTCAGGATGTGATAGGAATGCATTCAACAC--TTTTTCAAACTGTAATTATGTTTCCCCAGTGAAACTCAAATACTCGATACGGTCCTGCTGCAGCTATACTAGACAGGTAATAATTGGAAAATGTAACTCAGAAGTTTTATCTCTTACATAGTAAAAGGTAAGGTTACATGCTGCATACAGAAGAGATTATTTTAAGTACGAGAAACTGTG-----------------CTATGTTAATTTTACATTTGTAGACCTGCTCCAGAGCTGTA ..........:x..x.:....xx........:...x...::..::......x----.x...................::....................:...............:::................................:.:.x.x.....................:xx...--..................::......:...:.............:....:.......:....:..:...:......................x....x:..-..:...........x..:x.........:..:...x::.x...............x::x..x::.x.-.:..:.....-----------------:x..:........:...:..x.:.:x..:....:....... 52M4I128M2D101M1I67M1I10M17D41M 328/399 82.2% 405/94230402 0.0% 25/399 6.3% 8936553 NA +3615 chr4 + 190214555 57429132 57429131 57429250 119 TTCTTTCCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x.....:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..:x.xx:...:..--..:..:..:..:...:.......::.x:.. 64M5I23M2D30M 76/117 65.0% 122/94230402 0.0% 7/117 6.0% -6267986 -87962416 +3287 chr4 + 190214555 57429139 57429138 57429250 112 CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTCCTTCC--TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x:.::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x...::.:x.--.:::.::..:..:..:..:...:.......:.. 65M5I14M2I33M 70/112 62.5% 119/94230402 0.0% 7/112 6.2% -6267978 -87962424 +3046 chr4 + 190214555 57429152 57429151 57429233 82 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 + 94230402 66493586 66493585 66493667 66493586 66493585 66493667 82 CTATTTTGCTATTTTTCGTTTTTAATTTTTCGGTTTTTGTATTGTATTTTTTTTTTTCTTCCATCCTCCCTTCCCTTCCCCC ..x.:..x..x.:....x..:..xx...:.:xx...:.x.x..x:x..:...:...:.....x....:......:.:.::.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -9064434 -85165968 +3791 chr4 + 190214555 57429173 57429172 57429332 160 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT--CCTTCCTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-CTTATCTCT chr4 + 94230402 50176267 50176266 50176425 50176267 50176266 50176425 159 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTA--TCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTC--TCCTCCATTCTTCACATATCCCT .....x...:x..x:::.:.......:....x--...x:..x:::..x.x.:x...:...:x.:...--:x...x..:..x:........:.....:xxxx.::x.:.:.::x:......x::.:...::........--..:.:.x.....:-.x....:.. 32M2D33M2I69M2D13M1I9M 99/156 63.5% 159/94230402 0.0% 7/156 4.5% 7252906 NA +3786 chr4 + 190214555 57429177 57429176 57429326 150 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCTTTCCTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTA--TCCGCCCACTTTTGCATTGTTCTTTCTGTTCTT--TGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTC--TCCTCCATTCTT .....x...:x..x:::.:.......:....x--...x:..x:::..x.x.:x...:...:x.:...--.x:x...x..:..x:..............:----.::x.:.:.::x:......x::.:...::........--..:.:.x..... 32M2D33M2D30M4I37M2D12M 94/144 65.3% 148/94230402 0.0% 10/144 6.9% 7252910 NA +3093 chr4 + 190214555 57429223 57429222 57429305 83 TCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::...:..:...x:::.:x....:...::.:::..xx..x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 57196 NA +3084 chr4 + 190214555 57429231 57429230 57429313 83 TCCTTCCTTCCTTCCTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::...:..:...x:::..x....:...::.:::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 57204 NA +3095 chr4 + 190214555 57429243 57429242 57429328 86 TCCTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAT chr4 + 94230402 57372027 57372026 57372112 57372027 57372026 57372112 86 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCAT .::......:...x.::.:x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:.. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 57216 NA +3089 chr4 + 190214555 57429265 57429264 57429355 91 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTATCTCTCTCCCTCTCTTTTTTTTTTTTTT chr4 + 94230402 83367328 83367327 83367418 83367328 83367327 83367418 91 TTGTTTTGTCTCTTCCTTTCTTCTCTGTTTTGTATGTGGCACATTTTCAGTTGTTGTTTTTGTTCTCCCACCCTTTTTTTTTTTTTTTTTT ..x:...x.:....:.......:::.x:...x.x.x.xx.x:x:....xx.:x..x...:.xx....:.x....:.:.............. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% -25938063 -68292339 +9917 chr4 + 190214555 57442914 57442913 57443188 275 TCCCCAGAGCACCCTGACGAGGGCAGCCTTTACTTTCTTGTGTTTTACTGTTGCTGGAAAAAGCTCTGGTCTTTACCTGGAATGGAAT----GGGCTTGTTTGTCACCTAAGTGCAAATGTCATTTTAGCACTTCGCTGGTCACAACACCCTTTCTGGCCTTTATAGAAAATGACATATTCCTGTGTTCTTTGTCTCTAACACATGCTTCAGAAAGGCACGGTCTGTTATTATGCTTTAAAAGGTTGGAGAGAAAATGCAGAGACCTGTAGGCCAAATA chr4 + 94230402 48483710 48483709 48483982 48483710 48483709 48483982 273 TCCCCAGAGCTGCTCCA-GAGGGCACTCTTTACCTTAAATTCACACACTGC--CCAAGAAAAGCACAGAGCTTCA---GTAATGCAGACTTAGAGTCTGTTTGCCACTGAAGTGCAAATGTCATTTTATCACTTCAGTGGTCACAAAACCCTCTCTGGCCTTTCTAAGAAACAATATATTCCAGTATTCCTTCTTTCCAATATATGCTCCAGCAGGAGCCAGGCGTTTATTATGTTTAGTAAGGCTGGTTGGAAGATTGAGAGTGCTGTAGACAAAATA ..........xx.::x.-.......x:......:..xxxx.xx:x:....:--.::::......x.x.:x...:.---.x....x.:x----.:.::......:...:x...................x......:x.........x.....:..........x..::...::.:.......x..:...:..x.:..:..:.:.....:...x.:.:xx.:.x.xx........:..x:x....:...xx:...:..xx....xx......:.x..... 17M1D33M2D22M3D10M4I187M 188/269 69.9% 273/94230402 0.0% 10/269 3.7% 8959204 NA +3492 chr4 + 190214555 57478975 57478974 57479127 153 TCTCTAATATCATATAT-ATTATATATATCATATATATTATATAATTATTATATGTTATTATATATTATAATATATAATATATAATATATATTATATATTATATATAATATATATTATATATTATATATTATATAATATATATTATATATTATA chr4 + 94230402 46018801 46018800 46018938 46018801 46018800 46018938 138 TCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGT----ATATGCTGTGATATATGATAA-ATATGGCATATAATATATA---------AAAGATAATATACAGTACATAGAATATATTA-GTCGTATGTA-TAGATATGATA ..::.:...::::....-..:xx..:xx.....x..xx.....::.----.....:.:.x......x....-....:::............---------.x.x........:.x..:...xx........-:.x:...:..-..x....x... 17M1I28M4D21M1D19M9D31M1D10M1D11M 99/137 72.3% 138/94230402 0.0% 17/137 12.4% 11460174 NA +3276 chr4 + 190214555 57479022 57479021 57479130 109 TTATATGTTATTATATATTATAATATATAATATATAATATATATTATATATTATATATAATATATATTATATATTATATATTATATAATATATATTATATATTATATAT chr4 + 94230402 71903451 71903450 71903558 71903451 71903450 71903558 108 TTTTACATTATCGAATGT-ATTATATATGAAATGTTAGGTATTTTAATCATCATATGTATTATGATTTATATAAGATTAAACATGTTACATATATAATGCATTATATAT ..x..::....::x..:.-..x......:.x..:.x.x:...x...xx:..:....:..x...:xx.......xx..xx.x:..:.x.:......x..::......... 18M1D90M 72/108 66.7% 108/94230402 0.0% 1/108 0.9% -14424429 -79805973 +13685 chr4 + 190214555 57488177 57488176 57489048 872 TTCACATTTGAAAATATAACTTAAACAAAGCAGGGACCAAAGATCACAGAGATCTCTGAATTAATTGGATTACTCAGTTTCATACAAACCCAATAAAACAACAGATCCCCTGTAGGGTA-GAAGGTATAATCTATGCATTTACCTCTGTGTACTACCCTTCTTACTAAGGTTCTATTACCCTACTGCAATCATTAAGCCTGTGTACAAACCACCAAG--CTAAACAAAGAGGCTATTTTTACAGA-----AGGGGATGAGAGGCAAGGC--AAAACATTTTTTAAAAT----AAAAAATAA------TTTTTCCTCAAAGCCCAGAACAGTAGCAGAAGGCTTTAAGAACATAAACATAACCAATCTGTCTATTCCAGGGGATAA----AGGCTATGTTTCTTAAACATAAAAGAACAAAATTTCTAAGTAGCAAGCAAGTTGGAAGCATTTGCATAATGGATTCT---ATTTACATAAATTACGTTGCTTATAGCAGTCATCTGATAAGACTTGGCAAAGGTGGAGGCAGAAGTTGAAGTGGAATGAAAAGG-GTGAGTGTGTAGTTCTAGGATTCCTTTTAGCC--CTTTGTG-----GACTTTCTCCATTCTTTGAAGTCTGTGTTTATTTAGGGGTTAACGTGTGCATTTGCCCCAAACTTTATAACCATGAGTGTCAAGAAGAATTAGATTTGGTCATTGCTACACGCTCCCCCTACCCTG--TTTTGTTCTCTTTTATGAAGGTAAAAATGAGTGCATCTGTCAACTACTGGAGCATGTTAACTCATGTATGTTGGGATTTGACAGCCACTGGCTGTGAATTTTCTCACCATAACAACCAAATGAAAATGTCAGAAATGAATCTTTTTGCTAAGTGCCAGATTTTC---TTTCTCATATGCACCAT chr4 + 94230402 48487682 48487681 48488507 48487682 48487681 48488507 826 TTGATATTACAAAATAGGATTTG---------GGGAATGAAGCTCAGAGAGATGTTTGAATTAATTGAATAATTCATTTTAGCATTAACATGATGAAAGAATAGATCTCCTGTTGGGAATTAATGTATAATGCATACATGGAACTTTCTGTATGCCTTTTATCATTCAGAG---------CAACTGTAGGCAAGATGGTAATGTGGAAACAATTAAAATTTAAACAAAGGAAATTTTTGTAAAGATTTTTTTTGAAGGAGAAGTAAAATTGCAAATATTTCATAGGATTTACAAGAGAGAAGGTTTTTTTTCTTTCAAAGT--------GATGCAGAA----TTCAGAACGTATACGTAACCAATCTGTCT-TTCCATGGGAGAATGAGAGACTGCAT---TTAAACATAAGAGAATAAAA-TTCCAACCAACAAGTGAAGAAGACATATTTAAATACTATATTTTTAAATTGACATAAATTACATTGCTTGTAAAACTCCTCCAATATAACTTGGCATAGGTATA-ACATTGGTTCAAATTGAGTGGAAAGGTGGGAGTGAATAGC-------TTGCTATAAGCCAGCTTTGTGTCATCACCTTCTTCCAGTTCTCGA---CCTTGGGTCTCCAGGAAGAAACGTATCCACT--CCCTAAGAGCTGACTTCTGGAG-----AGCAGTAATGGAATC--------CCATGCAAGCTCTTCAGCCTGACTTACGCCATCTTTTCTGAGGGTG-------------------------GTGACTCGTCAGCATTGGTACTGTGCCATCTGCCGGTCTGTGGTTGGAAGTTTTCTTAATGTAACAACCAAGTAAAAATGTCAGCAGTGAATCTAGGTGCCAAAACTTGGCTTTCCCTGTTCCTTGCATGAAGCAT ..x.:...xx......x:.:..:---------....x::...x...x......x.:...........:..x.:...x...x::.:x...x::..:...x..:.....:.....x...x.-x..x.......x:..:...xx.x..:.x....:xx.::..x.:.:.x..:x---------.x....:.:x..xx.x.x:x:...:x....x.::..:--:.........:::x.x...x..x...-----xxx.:.x....:.:..:::--x...:....:x..::..----..:.:.x..------....:::......:--------.xx......----..x.....:..x..:..............-.....x....x..----..:..:::.---..........:....:....-...:..x:.:....::.:xx:..x::....:x...x.:x...:.---...x...........:......:..:x.x..x..::...x:........x....:x.-:..xx:...x..:.x..:..:.....-.x.....x:...:-------..x..x.x....--.......-----:x...::....x.::.:..---.:x..xx.x.::...::xx.....:.x..:.--...:..:xx:.:xxx:.xx...-----..x..x.x.:..x.:--------.:.::.:xx.:.:::.x....--..x:.::x......x...:...:-------------------------.x::.x:..:.:.x:xx...:xx..xx..:..x.:.:.xx...:..x:.:......:.x::..........:.:..........x.:.......xxx...:..:xx:::.x...:.---..:..:::...x.x... 23M9D87M1I51M9D37M2I26M5I19M2I17M4I9M6I14M8D9M4D29M1D13M4I9M3D20M1D44M3I57M1D26M1I13M7D12M2I7M5I19M3D31M2D22M5D15M8D21M2I23M25D116M3I17M 510/786 64.9% 826/94230402 0.0% 126/786 16.0% 9000495 NA +3139 chr4 + 190214555 57494514 57494513 57494596 83 ATCAAACACTATTTTTTTTTTTTTTTTTTTTTTTTTGCAGAAGGAGTCTCGCCCTGTCACCAGGCTGGAGTGCGATGGTGCAA chr4 + 94230402 4754012 4754011 4754092 4754012 4754011 4754092 81 ATCAAATGCTGTTTTTTTTTTGTTTTTTTTTTTTCCCCATAGGGGCTCTGCCTCCATCACTGAG-TAGACTGC-CTGATGCAA ......::..:..........x............::x..x.:..:x...xx.:.::....:::.-.:..x...-x..:..... 64M1D8M1D9M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 52740502 NA +4215 chr4 + 190214555 57514386 57514385 57514527 142 TTTTCTTTCTTTCT-TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTCTTTCTTTCTTT----CTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:x..-:....:..::...:..:x.:.x::.x:.:..x.x..x..::..::x......--x..:x...:.x...............:----.::x.:..:::x...::..x.:..:......::..:..:..:.x..... 14M1I52M2I27M4I49M 92/142 64.8% 149/94230402 0.0% 7/142 4.9% 7338120 NA +3637 chr4 + 190214555 57514394 57514393 57514543 150 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCT---TTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTT chr4 + 94230402 19215408 19215407 19215566 19215408 19215407 19215566 159 CCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:::.:.:.:.:::.::.:...:...:...xx....xx.x-......x..::...x......xxx....---....:.xx::.:.:...x......:.x:.x.:....-----:.:....xx:..:....:x:...x.x.:.....x..:.:.x...:. 40M1I28M3I36M5I46M 94/150 62.7% 159/94230402 0.0% 9/150 6.0% 38298986 NA +3251 chr4 + 190214555 57514396 57514395 57514526 131 TTCTTTCTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCT--TTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCT chr4 + 94230402 6297115 6297114 6297254 6297115 6297114 6297254 140 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCT .....:..x.-....xx:.......x:...x.x.x....:.x..::..------......:--x.....x.:.......x:.x....:..x.....:.:.x.x:xx.::..:x:x..xx....:...::..:..x..x.. 10M1I37M6I7M2I77M 87/131 66.4% 140/94230402 0.0% 9/131 6.9% 51217281 NA +4486 chr4 + 190214555 57514405 57514404 57514550 146 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .....x...:x..x:::.:.......:....--.:x:.:x::...x:x.:x........x.::.:.x.x..:x...:.x...............:xxxx.::x.:.:.::x::.....x.:..:......::...:..:.:.x..... 31M2I115M 91/146 62.3% 148/94230402 0.0% 2/146 1.4% 7338138 NA +3743 chr4 + 190214555 57514422 57514421 57514542 121 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCAT-CTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x.....:x..::.:..x::....:x...x::...:x.x.xx..:..x.-..:..:...:..:..:::.:.....x...xxx.::....:x.:x.....:...:x...:..... 56M1D64M 76/120 63.3% 120/94230402 0.0% 1/120 0.8% -25462209 -68768193 +3003 chr4 + 190214555 57514445 57514444 57514511 67 TTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 49829841 49829840 49829907 49829841 49829840 49829907 67 TTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT .....x.xx:.:x..:..x.::x...........:...........:....:..:::.:::..::.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 7684604 NA +4389 chr4 + 190214555 57514453 57514452 57514587 135 TTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTT--------CTTTCTTTCTTTCTT------TTTCTTTCTTTCTCTTTCTTTCTTC chr4 + 94230402 50176267 50176266 50176415 50176267 50176266 50176415 149 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .....x...:x..x..:..:..::...:..:x..:x:.:x::...x:x.:x........x.:...:x.x..:x...:.x....:..........:--------.:.:.::x:......------..::..........:.:.x...... 95M8I15M6I25M 90/135 66.7% 149/94230402 0.0% 14/135 10.4% 7338186 NA +3630 chr4 + 190214555 57514458 57514457 57514579 122 TTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x...:...:::..:.xx.x...::.....:....:.:x..::.:.x....xx..:..x.::.xxx::.:.x::....:x.xx.......:..:::::..:.:......:....:.x... 122M 72/122 59.0% 122/94230402 0.0% 0/122 0.0% -6182660 -88047742 +3727 chr4 + 190214555 57514467 57514466 57514583 117 CTTTCTTTCTTTCTTTC------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:------..:.:.....:....:.:x..::.:.x....xx....:x.::.xxx::.:.x:...:.:x.xx.......:..:::::...........:..:...x... 17M6I100M 74/117 63.2% 123/94230402 0.0% 6/117 5.1% -6182650 -88047752 +3646 chr4 + 190214555 57514495 57514494 57514645 151 TTTCTTTCTTTCTTTCTTTC-CTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCT chr4 + 94230402 71957335 71957334 71957485 71957335 71957334 71957485 151 TTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCT-TTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCT .....xx.x....x:..:..-xx....x::.....x.:.-....::......x.x...x.::.:.:...:.....xx..:x.:x:..:....xx.:.:xx:xx...:..xx:.:x...:xxx...::..:...:.:...:..:......... 20M1I18M1D112M 93/150 62.0% 151/94230402 0.0% 2/150 1.3% -14442840 -79787562 +3029 chr4 + 190214555 57514505 57514504 57514585 81 TCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT .::..:...x:..x:..x..::x...x.x....:.:..x..:x:::x:.................:....::xx....... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 33538004 NA +3501 chr4 + 190214555 57514519 57514518 57514612 94 TTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326935 83326934 83327028 83326935 83326934 83327028 94 TCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .:....x..:x::x::...x.......xx.:::..........:....x...xx::::x.....x.x.:.....x.....::..::.:...... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% -25812416 -68417986 +3490 chr4 + 190214555 57514522 57514521 57514616 95 TTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x..:x::x.:.:.x.......xx.:::........:......x...xx:.::x.....x:x.:.:...x.....::..::.:...... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% -25812412 -68417990 +3042 chr4 + 190214555 57514530 57514529 57514610 81 TTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTT chr4 + 94230402 86491064 86491063 86491144 86491064 86491063 86491144 81 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT ...:......:...:....xxxx..:.::..:.x:x:.....:.:.....:...:.:.:::.:.:..:.x...:.::..:. 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% -28976534 -65253868 +3042 chr4 + 190214555 57514534 57514533 57514614 81 TTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 86491064 86491063 86491144 86491064 86491063 86491144 81 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT ......:...:...:....xxxx..:.::.:::x:x:.............:..:..:.:.:.:::..:.x...:.::..:. 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% -28976530 -65253872 +3184 chr4 + 190214555 57514535 57514534 57514620 86 TTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCC---CTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .........::..x.::..x..:.:...:.:.---....xx..x::x..:............::...x.....x..xx:.x..... 32M3D51M 58/83 69.9% 83/94230402 0.0% 3/83 3.6% 142508 NA +3420 chr4 + 190214555 57514577 57514576 57514663 87 TTTCTTTCTTCTTTCTCTC-------TTTCTTTCTTTCTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 49829809 49829808 49829907 49829809 49829808 49829907 99 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT .....:...xx...:...x-------..:.x..:.:.x.xx...x:...:-----...........:...........::......:.:.:.:...:.. 19M7I24M5I44M 64/87 73.6% 99/94230402 0.0% 12/87 13.8% 7684768 NA +3322 chr4 + 190214555 57514581 57514580 57514661 81 TTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 86491064 86491063 86491144 86491064 86491063 86491144 81 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT ...:..:...:.:.:....xxxx..:.::..:.x.x..:.:.........:...:.:.:::.:.:....x.:.:..:.... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -28976483 -65253919 +3048 chr4 + 190214555 57514644 57514643 57514711 68 CTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCTTTCTTTTCTTTCCTTTCTTTTTCTTTCTTTTTGA chr4 + 94230402 12940264 12940263 12940331 12940264 12940263 12940331 68 CTCTCTCAACTTCTCTCTCTCCCGTTCTCTTTCTGCTATACGTTTTCTTCTTTCTTCTTCCTCTTTAA .......xx::.........x:.x..........x::x.x:x...:...::..:.....:..:...:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 44574380 NA +3534 chr4 + 190214555 57518376 57518375 57518431 56 ATGACTCTGCCTCAAAACAAAACAAAACAAAACAACAACAACAAAAAACCCAAAAA chr4 + 94230402 27325814 27325813 27325869 27325814 27325813 27325869 56 ATGAAGCCTCCTCAAAAAACAAAAAAACAAAACAACAACAACAAAAAACCCCAAGA ....xx.:x........x.x..x............................x..:. 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 30192562 NA +3694 chr4 + 190214555 57538007 57538006 57538124 118 CCCCCAGCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCCTCCTCCTCCTGATCCTCCTCCTTCTTC--TTCTTTTTCTCCTTCTCCCCTTCCTTCCTTCCATCACATTTTTA chr4 + 94230402 63998153 63998152 63998270 63998153 63998152 63998270 118 CCTTGAACTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCT--TAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTCTATGAAAGATTTA ..::x.:.........:.:..:.:x:x...:......:..x..x:...:.....--.:..:.:::...x....:--::.....x.:.:..xx..:.x.:..x.....:..x.x.xx.... 54M2D18M2I44M 76/116 65.5% 118/94230402 0.0% 4/116 3.4% -6460146 -87770256 +3051 chr4 + 190214555 57562224 57562223 57562316 93 TCCTTTCTAAAAACCAGCTCCTGGATTCACTGATTTTTTTTTTTTTTTCTTGAGACTTTTCCTTTTTTTTTTTTTTTTCATGATCTTTTTTTT chr4 + 94230402 64413965 64413964 64414057 64413965 64413964 64414057 93 TCTTGTTTCAACAGCAGATACAGGGTTCTCTAATGTTTTTGGTTTTTTTTCCCCTCCTCTCCTTTATTTTTTTTTTTTTAGTATCATTGCTCT ..:.x.:.x..x.x...x.x.x..:...x..:..x.....xx......:.:xxxx.:.:......x............:.xx...x..x:.:. 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% -6851741 -87378661 +3458 chr4 + 190214555 57585124 57585123 57585197 74 GTGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCACAAGAATCACTTGAACCCAGCAGGCAGAGCCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:x::........x.x::x...x.............x..x:xx:.x...:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -18448080 -75782322 +3013 chr4 + 190214555 57586591 57586590 57586677 87 TCTGTAGTAGCATTTTTTTTTTCTTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTGTCTTTC chr4 + 94230402 49829822 49829821 49829908 49829822 49829821 49829908 87 TTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC .:.x....::x.x..::x......x.xx:..x.:.:.x:::x...........:...........:....:..:::.:::x..::.. 87M 54/87 62.1% 87/94230402 0.0% 0/87 0.0% 7756769 NA +3433 chr4 + 190214555 57586619 57586618 57586749 131 TTTCTCTCTCTTTCTTTCTTT----CTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTGTCTTTCTTTCTTTCTTCTTTC--TCTCTCTCTCTTTCTTTCTTTCATCCATTCTTTCTTTTTCTGAG-----------AAAGACTCTCCCT chr4 + 94230402 49829809 49829808 49829956 49829809 49829808 49829956 148 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGGGCACAAAAACGATCCTCCCT .........xx..:..::xx.----x..:.x..:.::x.xx:..x...:.x:.:x.x.........:...........--......:.:.:::..::..:x..:x..:x....x.....:x...-----------..x..::...... 21M4I53M2I44M11I13M 87/131 66.4% 148/94230402 0.0% 17/131 13.0% 7756810 NA +12152 chr4 + 190214555 57594710 57594709 57595164 455 AATATATTTAATAAGACATTTAAAAAATGAAGTGGCCCTTGAAATTTCAAAGTAATT--TTTATTATTTCCATAACTCTCTTGTCAAATTAA------TTAGATA--TTGTGGGCCAAATGTGTAGTTTAAAATCATCAGATTAATGCAAATGACATTTTATATGTAAAATTAAATAGGAGACTTTTAGAGATTTCTTAATTTAACCTGAAAGGCAATTGTGAAAACAGTTCC--TTTTGCCAAAATTAAAGATATTATTTAAAATTAATTTTAAAGCTAAAAGACAAACATTACTTCAGATTAAATGCTAAAGGACAAAGATTAATAGTGAAAAATCTTTAATTAGTAGGAAGGAATTGAGTGGAAAATTATTAACTCGTTGCTTCATAAATCTTTAATACTC-ATTGATTAATGCTTTATAT-TTAAAGATATAATCACCAGAGTGTAAATAACCAGTA---TAACCTTT chr4 + 94230402 48500873 48500872 48501311 48500873 48500872 48501311 439 AATATATTCAATTAGGAATTAAATAAA--AAGTGTTCCTTAAAACTTTAAAGTAATTAATTTTTGATTCTTGTAGCTATTCTG-CAGCTCAACACGTTTTAAATCATTTATTGAGCAAATATG---------AGTAACATATTCAGGAAAA---------------AAAGATAAACAAGTG-CCTGTAGGGATTTTATAATTTAAGGGGAAAGTTGAAAAGCAAAATGATTTCAATTTAGAAGAAATTAATATTGTCATCCAAG--TAAATGTAAAAGTAATGGGCAAAT-TTGCTTGAGATTTGATGTTAAAGGGCA--GATTGATGATGAAAAGTCTTTAATTGATGGTATGGAATTGAGTGGAAAATTACTAATGTGTTCTTTCATAAATCtttaatacttaatttattattactttacatataaaaaatataaCCAGGAGACTGTAAATAAGCTATACTGCAACCTTT ........:...x..:x...x..x...--.....x:....:...:..:.........--...x.x...::::..:..x.::..-..:x.:..------...:..x--..:.x.:x.....:..---------.x:.x..x...x.x.x...---------------...:x....:.:.x.-.:.x...:.....:x........xxx.....x::.xx:xx....:::..:.--...x.xx:.......x:x.:.:..::..:--...x.x....:x...x:.:....:-..:...x.....x:...:......:..--....:..::......:.........::.:.x.x...................:...:x:...x:...................:-...x....x.:.....:..-.x...:......:..xx...x.........x.x:..---:....... 27M2D28M2I24M1D8M6I7M2I16M9D19M15D15M1D51M2I29M2D24M1D27M2D84M1I19M1I36M3I8M 303/422 71.8% 439/94230402 0.0% 50/422 11.8% 9093837 NA +3619 chr4 + 190214555 57603680 57603679 57603771 92 CATGGTGGCATGTGCCTGTAGTCTCAGCTACCTGGAAGGCTGAGGCAGGAGGATCACTTGAACCTGGTATTTCCAGGCTGCAGTGAGTGGTG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::....--..::.x......::.......:..:.........x.xx.x.:.x..........::.x.x:.:::.....:..x:x:..:.. 8M2D82M 61/90 67.8% 90/94230402 0.0% 2/90 2.2% -18429517 -75800885 +3070 chr4 + 190214555 57604930 57604929 57605022 93 ATAGTTGAAAAAGTTTAAGATGTTATAAAAAAATATATACACATACATACACACATACACTCACACACACACACATAAACACAGAAATTGTCA chr4 + 94230402 7596572 7596571 7596664 7596572 7596571 7596664 93 ATACATGAGAAATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCA ...xx...:...xxx.:x..x:......xxxx:.x.....x:...x.:........:...xx.:x..:.:.:.............:.:.x:.. 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 50008358 NA +4775 chr4 + 190214555 57673135 57673134 57673304 170 ATTTCCTTCATTTGTAGTTTATAACAGCAATAACATCCCAGGCAGAGGGCATTTCCTGAGGATTAACAGCCAGCTGGGGTTAATGGCTGAAGGTAGAGCCAAAGACCATCAATTCCTTCCCTCTAGCCATTAATTCTTAGGAGATGACCTGTTCTTTCATCATTATCGCT chr4 + 94230402 85109553 85109552 85109702 85109553 85109552 85109702 150 ATTATTCTCTCTTTCAGCATATAACAGCAATAGGGACCTCACTGCAGGGCACTTCCTGAAGATTAATGGCAGGCAGGGGTTAATGGCCTGAGGCTCACCCAG--------------------TCAGTCGTTAATCCCCAGGAAATGTTCTGTGCCTCAATCCTTAATGCT ...x:::..x:..x:..:x.............:x:x..:x:x::x......:.......:......::..x:..x............:x:...:xx.x...:--------------------::..:.:.....:.::....:...x:....x.:.:x...x...x:... 102M20D48M 97/150 64.7% 150/94230402 0.0% 20/150 13.3% -27436418 -66793984 +3685 chr4 + 190214555 57673162 57673161 57673304 143 CAATAACATCCCAGGCAGAGGGCATTTCCTGAGGATTAACAGCCAGCTGGGGTTAATGGCTGAAGGTAGAGCCAAAGACCATCAATTCCTTCCCTCTAGCCATTAATT-CTTAGGAGATGACCTGTTCTTTCATCATTATCGCT chr4 + 94230402 18617829 18617828 18617969 18617829 18617828 18617969 141 CAATGACCTCT---GTACAGGGCATTTTCTGAAGATTAATGATGGGTTTGGAGAGATGGCCCTCGCTTGTACTACAGGTTATCAGCTCCTCCCATCCGATCATTAATTCCCCAGGAAATGCCTTTTGCTTCAGTAGCTTTTGCT ....:..x..:---.:.x.........:....:......::::x:.:.x..:xx:.....:xxx.x.x.x:.:.x..:::....::....:..x..::::........-.::....:...x.:.x.x...:x:.x::.x.:... 11M3D94M1I35M 85/140 60.7% 141/94230402 0.0% 4/140 2.9% 39055333 NA +3321 chr4 + 190214555 57685451 57685450 57685523 73 TGTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTTTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........:.........x.xx.x...x.:........::.:..x:xx:..:.x... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -18347754 -75882648 +7209 chr4 + 190214555 57695226 57695225 57695523 298 AGCAATTCGACAAATAATTCACATATATAGAGCTTCTAAAATGTACCTAAATCGAAATGGTTTTGGAACTAATAATTATAAGCAGAGGCCTCCTTGGCTTTCATTTCACCTTGGGGTCATAATTTTATATTTTGAACATTCTCTCAG-AAGAGTATTAC--CCCTGAATGGGCTTTCTTAACTGCTTTCCTGT-TGAACTCTGGCAAGCCTAAAGTGTGTCAGAAAAATGTTTTAACTCCATTCCATTTCTGCTTGGCTAGAGAAAGCTTTTAATCACTGGAAAGCTCACA--TTTTGTAAATG chr4 + 94230402 48525083 48525082 48525377 48525083 48525082 48525377 295 AGTAATTGGA-AGATATTTTAAATATTT-GAATATCTCAAATGCATGGGGATTGAGATGTCTTTCAAATCCCTG-TTGCAAGCCAAGGTGTC--TGGTTTTCAGTGCTCCTGGAGGTCATGATTTTCTTTCTTTTATGCTTTCTTAATAAGTATATTAGAGCACTGAA-GCTTTTCTTTAACAGTTTGACAGGATGAACTCTGCCAGGCCTATGGAGT--CAGGCAAATATTTTAACTCAGGCAGATTTCTGAATGACTAGAGAATGCTTTTAATCTCTGG-AATCTCGCAGCTTTTGCAAATG ..:....x..-.:...x..:.x....x.-..::x...x.....:.:xx::..:..:...x:...x:..::xx.:-..::....x:...:x..--...:.....x.x.x...x.:......:.....x.x.:..xx.:::.:...:.:-...x:.....x--.x.....-.xx:..::.....x.:..xx.x.x-.........x..:.....x:.x..--...:x....:.........x:x:xx.......xx..:........x..........x....-..x...:..--.....:..... 10M1D17M1D45M1D17M2D53M1I11M2I7M1D24M1I24M2D61M1D9M2I11M 200/289 69.2% 295/94230402 0.0% 15/289 5.2% 9170143 NA +3095 chr4 + 190214555 57731913 57731912 57731948 36 AAAACAAAACAAAACAAAGAAACAAACAAACAAATC chr4 + 94230402 59174280 59174279 59174315 59174280 59174279 59174315 36 AAAATGAAACAAAACAAAGAAACAAACAAACAAATC ....::.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -1442367 -92788035 +12681 chr4 + 190214555 57736930 57736929 57737441 512 TTTGCATGCGCTATTTCCCCTCCTGATCTCCTCTGTGAAATGCAGTTGAATTATTTATGTGTGCCATGCTTATTATTTATGTGCTCCACAAAGTGGAGAGCAAGAGGGAGTACTAACATTTATTCCCCAAGTGGG-AGGAGTCAGTAGGAACAAAAAATGTTAGGC-CAAATAAGTCACTTAGTAGAATGAAAA--CAATGGAATCTTCTATCAAATGCCATTAGCTCAGGACTCGGAGTGTCATGGAGAAGACGTCTAAACCATTTGGCCCACTCAAATGAAGGACAAGAATGTTCTTTCCTGT-GGCACCAAGGCCAAGGAATCATTGGTTAAATAAAATTAGGTGTAAGATGCTGAGTAAAGTTGAAGTCCTGAACTTACTTTGATTATTTGCATGGGTGAACCTGATGAGGACTCACCTCCTAATGACAAAGCCCATTAATAGGGATTGTTTGGTTTTGGAGGCAAGAGATGGAAAGCTGATAAAGTCAGAGAAATTAAG---------AAAATCATGCTAA chr4 + 94230402 48529419 48529418 48529898 48529419 48529418 48529898 480 TTCACATTCTTTATTTCTTCCCTTGACCCATTCTA------ACAGCTGAAATATTTATGTGCATCTCACC--------ATGCAC------AAGAAATGAGACTAGTGGACCACGTAGATTTGTTTCC-AAGTGAGTAGCAGAGGGATGGAAGAAGAAAGGTGTGGTGTGAGTAAAGTATTAAGTTGAATGAAAAATCAATGACATCTTTTATCAGATGCCATTAGTGTATACCTCAAAGTGTCAGGGAAAAGGCATCTAAAACATTTGGTGTATTCTGGTGAATGATAA-AACATGCTTTTCTGGAAGTGCTGAGATTAAGGAACCGCTAGTTAAATAAAATCAAGCATGAGGCATGGACTGGAGCTCAAATC---AA--------GATTATCCACATGGCTGAGCCCATTAAGAGCCTTGCTCTTAATAACTAAGCC-------------TGTTTGGTTTTTGAGATTAAATATAGAAATTTGATGAAGCCAAAGAAATTAAATGTACTCATAAAATGATACTAA ..::...x.x:......::.:.:...:.:x:...:------:...:....x..........:::.x::.:--------...::.------...x::x...xxx::x...x:..xx.x....:..:..-.....:.-..x..xx:.xx....x..:...x..xx..:-::.:...:x:.:.x...x.........--.....:x.....:.....:..........:x:.x:x...::.......x...:...:.:......x.......:x:.:..x::....x..:..-..::.x....:...x-:.::.::..:::......:.::.:............:.:.::.:..::::x..x.::..:.x..:..---..--------......:::.....x...:..::x.:..::.::xx...:....:..x.....-------------...........x...::x.:.x..:....x:....:...:..:.........:---------.....x..:.... 35M6D29M8D6M6D37M1D7M1I30M1I27M2I93M1D15M1I67M3D2M8D52M13D53M9I13M 309/466 66.3% 480/94230402 0.0% 60/466 12.9% 9207511 NA +3248 chr4 + 190214555 57751536 57751535 57751617 82 TCAGGGATCTCCAGA------GAAACAGAAACAACAGGAGATCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248002 75248001 75248088 75248002 75248001 75248088 87 TCAGGAAGCCTCAAACTCTCAGGCACAAAATTATCACAAAATAAATCCTTC-CTCTCTCTCTCTCTCTCTCACACACACACACACACa .....:.x.::..:.------.:x...:..x:.x..x:.:..xxx..::..-..........:........x................ 15M6I30M1D36M 60/81 74.1% 87/94230402 0.0% 7/81 8.6% -17496466 -76733936 +3436 chr4 + 190214555 57751580 57751579 57751619 40 CTCTCTCTCTCTTTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::........:........................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -17496469 -76733933 +3222 chr4 + 190214555 57751582 57751581 57751621 40 CTCTCTCTCTTTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::......:..........x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -17496467 -76733935 +3185 chr4 + 190214555 57751584 57751583 57751619 36 CTCTCTCTTTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ........:................:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 45150280 NA +3324 chr4 + 190214555 57759638 57759637 57759691 54 TATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCACTTGAACTCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....:...........::........x.xx.x...x.........:...:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -18273573 -75956829 +3017 chr4 + 190214555 57759760 57759759 57759801 42 TCAAAAAAAGAAAAAAAAAAAAAACAACCACACACACAAAAA chr4 + 94230402 33976327 33976326 33976368 33976327 33976326 33976368 42 TTAAAAAAAGAAAAAGAAAAACAAAAACCACACACAAAAAAA .:.............:.....x..x...........x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 23783433 NA +3832 chr4 + 190214555 57762336 57762335 57762426 91 TACCCCTGTAGTCCTAGCTACTTGAGAGGCAGAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAGTGAGCCGAGATGACGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:.x.x......:.:..........:....x...x.xx.x...x................x.xx:..:..:..------:.x....:.... 73M6D12M 64/85 75.3% 85/94230402 0.0% 6/85 7.1% -18270869 -75959533 +12823 chr4 + 190214555 57805083 57805082 57805535 453 AAACAAGGTAACAAAACCACACCACACAAATCTACATGCTCCCTACTTCAAATCAACTCTAATTATCAATGTTTATATATT-ATTCCAA-GTTCTCATTCATCTAACTCTAGACCACAATTTAATCTTGATGGATTGTGATGGAGCATC-ATTTGTGGTGCAGGCTATGATCTGTTATGATTCCTTTGCAAAATTATTATGATGAATCACACTTGTCAATGATTTTTGAATGAGACAAATCCAAAACTAATTTGCTATCTGCAATCCAGATGTAATTGGCT-ATGTATCATAAATCTTC--CATGAAAATATTCTTCAGTTCCATTTCTGTCAACAAACAAAAGTGTTCTTCATAGTTCATTCCCCAAGAAAAACAATAGAG--TATAATTAGAAGGGAAGAGAGAAAGTGCATAGTTGACTTGAATATAAA--AAACAGAAAATGCCTTGA-TCAAATTGGCT chr4 + 94230402 48537564 48537563 48537995 48537564 48537563 48537995 432 AAACAAAGCAATCAAA--ATCCCTGACATGTACATTTTTCTCCCACCTTAAATAAA-------TAACAATGCTTACATTTTTATTGTGGTGTCTCCATTCATATGACTTT---------------CCTAATGGATGGAAAGTGAGCACCTGCTTGTGGCATGAAACATTGTCTGCTAAGATCCTTTAGTGAAATGATTGTGATAAATCGCGTTTGTCAGTGTTTTCTGAATGAGACAAATCCCAAACTAATCTGCTATCTGCAATCCAAATGTAAGGGACTCATGGATCATAAACCTTCTGCGGGGAAATATGCCTCCATTCTGTATTAGTCAGTAAACAGAAATGTTATTCATACTTCCCTATACAGGGGCTGTGATGGAAGCTCTAATTAGAAGGTAAGTGAGAAAAGGGACA--------GAATATGAAATAAACTGTGTATATTTGGATTCAAATTGATT ......:.:..:x...--.:x..xx...x:.x:.:x.x:::..:..:.:....x..-------..x.....:...:..x..-...x:::-..:::.......x.:...:.---------------.:.:......x.x:.xx.....:.-::......::::::x:..x:....:..x...:.:..x.::....x...:....:....:.::......:..x...:................x........:................:......xx.:..-...x........:....--.:x.:......x.:..x:...::.x.:x....::.....:..:....x......x...x:.x:x..:.::xx:::..:..:--.x...........x...x......:x.x.:.--------......:..--....x.x:x..:::.x..-........::. 16M2D38M7D18M1I7M1I20M15D24M1I131M1I17M2I81M2I31M8D9M2I18M1I11M 290/421 68.9% 432/94230402 0.0% 43/421 10.2% 9267519 NA +3553 chr4 + 190214555 57806317 57806316 57806439 123 TGTGCTATTCATCTAGTCCATGCTTCCAAACTAACCTCACATAATAACACCATTAAT--AATACTTAACACTTATATAGAGTGCATTCCACCTTCAAAGTACTGAATAAACATTAAACAATTAAT chr4 + 94230402 41385116 41385115 41385234 41385116 41385115 41385234 119 TATGTAACTTATTTTATTAGTGGCTTAGTAATAAAGTCAGATAA----ACCTTTGATTTAATAATTAGCATTTATA--GAGTGCTTTCTGCCTTCAAAGCACTTTGCAAACATTAACTAATTAAT .:..:x.:.:..:.x:.:x:..x:.:x:x.x...xx...x....----...x..:..--....x...:..:.....--......x...::.........:...xx::.........x:....... 44M4D9M2I17M2D47M 81/117 69.2% 119/94230402 0.0% 8/117 6.8% 16421201 NA +3298 chr4 + 190214555 57806394 57806393 57806445 52 AGTGCATTCCACCTTCAAAGTACTGAATAAACATTAAACAATTAATGCACAT chr4 + 94230402 30612595 30612594 30612646 30612595 30612594 30612646 52 AGTGCATTACATCTTCAAAGTGCTGTACAAACATTAACTAATTAATCCTCAT ........x..:.........:...x.:.........x:.......x.x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 27193799 NA +7304 chr4 + 190214555 57831944 57831943 57832197 254 GGGAGAA-AAAGCTACTAAAAATGCCATTAAA-AATGTATTGCAAGTAAGAGCTGCGTTTTTCATTTTTTTAAAAAAGAAAATACAAGTTACTTGATGATGGTATCAGTTTGCTTTGA-----GTAGTTTTTTATCACAGATTTCAAAGGGAGATTGCTTTGAAGCACACCTTTGCTGAGACATAAAAACAAAATTTGGCTAAAGCTGAC-AGTTTGCTACAGTGGCTTAGTCCAGA-ATATAGGAAGAAATAGGGGGCCTTC chr4 + 94230402 48548400 48548399 48548652 48548400 48548399 48548652 253 GAGAGAACAAAACCAGCAGGTATTCTCTTAAATAATTTATAGCAAGAAAGAGATATGTTTTT--------TAGGGAAAGGGACTCTAGTTATTTGATGATAGATTCAGTTTCCTTTGACATTTTTTTTTTTTTATTGTGGCCTTCAAAGTGAAGTGTCTTTGAAGTGTGTCTTTGCTGTGACATGAAAACACAAGTTGGCTAAAGCCAATGAGCTTGTTGAGGTGAGT--GTACTGAGATGCAAGTGGAAACCAGGGGACTCC .:.....-...:.:.x:.::x..x.:x.....-...x...x.....x.....x.::......--------..:::..::::.:x.x.....:........:.xx.......x......-----x.xx........::::.x:.......x..::.xx........:::::........x.....:......x..x...........::.:-..:...:.:x:...:x.--..x.x..-..::.:.x:....:x:....x..:. 7M1I24M1I29M8D48M5I87M1I17M2D7M1I25M 167/244 68.4% 253/94230402 0.0% 19/244 7.8% 9283544 NA +3273 chr4 + 190214555 57858600 57858599 57858704 105 TGTATATATGCATATATGTGTATATATACATATGTGTGTACATACATATATGTGTATATATGTGTGTGTACATACATAT-------ATGTGTATATATATGTG--TGTGTACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ..:...:x.x:x..:..:..:.x.x......:.:..::....x.xx..:x........:..:....::..:.x...x..-------.....:x.x.x.:....--...x..... 79M7I17M2I9M 72/105 68.6% 114/94230402 0.0% 9/105 8.6% -18518259 -75712143 +3023 chr4 + 190214555 57858601 57858600 57858647 47 GTATATATGCATATATGTGTATATATACATATGTGTGTACATACATA chr4 + 94230402 55892185 55892184 55892231 55892185 55892184 55892231 47 GTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATA ..:.:.x..:....x.....x...........x.:............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 1966416 NA +3595 chr4 + 190214555 57858615 57858614 57858681 67 ATGTGTATATATACATATGTGTGTACATACATATATGTGTATATATGTGTGTGTACATACATATATG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:....:xx.::...:::x..x..x..x....:.....:.:.............:.......... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 30533124 NA +3093 chr4 + 190214555 57858647 57858646 57858694 48 ATATGTGTATATATGTGTGTGTACATACATATATGTGTATATATATGT chr4 + 94230402 65759989 65759988 65760036 65759989 65759988 65760036 48 ATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x....x:...:.:.......:.......:.x........:...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -7901342 -86329060 +3523 chr4 + 190214555 57858657 57858656 57858725 69 ATATGTGTGTGTACATACATATATGTGTATATATATGTGTGTGTACATACATATATGTGTATATATGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:x.:...:..:.:..x:.......x.:....:...:.......:......x.:.:..:..x.:.:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -28775266 -65455136 +3216 chr4 + 190214555 57858803 57858802 57858859 57 ACATGTATATATATGTGTGTACCTACATACACACACATACACACACACACATACTTA chr4 + 94230402 68837093 68837092 68837149 68837093 68837092 68837149 57 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA ..:...:::.:.:.........x:...x.:...:.........::.......x:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -10978290 -83252112 +3149 chr4 + 190214555 57868934 57868933 57868996 63 ACTGTCTCTCTCTGTCCTTTTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 48270721 48270720 48270783 48270721 48270720 48270783 63 ACTACTTATCTCTTTCCTGTTATAAATATGTATACATGTACATATTTGTGTGCATGCATATAT ...:::.x.....x....x.....x....:....:..:..:....x.:.:.::..::...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 9598213 NA +3753 chr4 + 190214555 57869160 57869159 57869296 137 ACATATATATATATATATATTTATAAAATATATATATATATCATATATATTATATATGATATATATCATATATATCATATATAATATATATATAATATATATCATA-TATATGATATATATATCATATATATGTGATA chr4 + 94230402 26320216 26320215 26320344 26320216 26320215 26320344 129 ATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTAT-----ATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTAT----TGTATATGTAATA .::...x:.x..:.xx.......xxx.::x..x..x...x...:..:...-----..:x..:....:.......::.....:.......x...x..:...x.x...-.....xx.xx:...----.:.......:... 50M5D51M1I14M4D13M 90/128 70.3% 129/94230402 0.0% 10/128 7.8% 31548944 NA +3427 chr4 + 190214555 57869203 57869202 57869280 78 TATATATTATATATGATATATATCATATATATCATATATAATATATATATAATA-TATATCATATATATGATATATATA chr4 + 94230402 26320263 26320262 26320341 26320263 26320262 26320341 79 TATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTA ......:..:....x.......::.....:.x:....x..x...:...x.....-.....:x.xx:...x:.....:.. 54M1I24M 58/78 74.4% 79/94230402 0.0% 1/78 1.3% 31548940 NA +3010 chr4 + 190214555 57869398 57869397 57869445 48 TATACATATACACACACACACACACAAATATATATATATATACACACA chr4 + 94230402 7596607 7596606 7596654 7596607 7596606 7596654 48 TATACCTATAAACACACACATGCACAGATTCATATATACATAAACACA .....x....x.........::....:..x:.......:...x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 50272791 NA +3493 chr4 + 190214555 57878126 57878125 57878236 111 TTTGGGTAAATTACCTACACTCACCAAGCTTCAGTTTTCCCAGCTGTAAAATGGGGATAGAAATAA-CACCTTTCTTATATATTCTTTGTGAGCTTTACACAATTCATCCTT chr4 + 94230402 83501144 83501143 83501255 83501144 83501143 83501255 112 TCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGTTT .:....:.......:..xx..xxx::x..:............x...........:.x.::x.:...-:....x:..:.:.x:xx:x.......x:.x.xx......x.x:.. 66M1I45M 73/111 65.8% 112/94230402 0.0% 1/111 0.9% -25623018 -68607384 +3006 chr4 + 190214555 57884713 57884712 57884777 65 TGCACATGTACCCAAGAACTTAAAATAAAGGTTGAAAAAAAAAAAAAAAAAAGAAAAGAATGTGT chr4 + 94230402 91067954 91067953 91068018 91067954 91067953 91068018 65 TGCACTTGTTTCTCTGCAACTACATTAAAAATTGAAAAGAAAAAGAAAAAAAAAAAAGAACCTGT .....x...x:.:xx.x.x:..x.x....::.......:.....:.......:.......:x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -33183241 -61047161 +4770 chr4 + 190214555 57906446 57906445 57906617 172 TGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAAAATATATA-TATATAAAATAT--------------------ATATATAA-AATATATATAAAATATATA---TATAAAATATATATAAAATATATATATAAAATATATATAAAATATATA-----AAATATATATAAATATATATATAAAA chr4 + 94230402 4618360 4618359 4618557 4618360 4618359 4618557 198 TATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatat---atatgtgt-tagattacatatacaatacatatatacatatatatatatgtatgtatataAAA .:.......::..............x:..x.x:......x.x......xx.x.x.....-......xx....--------------------...x....-:..x...x..x:x.x::..---...x.x........---....:.:.-..:.x..:.....x....:...-----.x.........x:...:......... 59M1I12M20I8M1I19M3I14M3D8M1D22M5I26M 129/168 76.8% 198/94230402 0.0% 34/168 20.2% 53288086 NA +4699 chr4 + 190214555 57906449 57906448 57906710 262 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAAAATATATATATATAAAATATATATATAAAATATATATAAAATATATATATAAAATATATATAAAATATATATATAAAATATATATAAAATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATATAAATATATATATAAAATAT chr4 + 94230402 4618357 4618356 4618568 4618357 4618356 4618568 212 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCAT-----------ATATCTCTATATAGTATAGATATAT----TATATATTATATGT-TGTACTAATAATACG-GAGATAGATA---AGGATTTATCTATGCTTCGTATTCTAT--------------------tatatatatatatatgtgttagat---------tacatatacaatacatatatacatatatat-atatgtatgtatataAAAGAATGTAATAT .::.x.......::..............x:x...::..-----------....x.x......:x...x......----.......x.x..:.-.:..:x..xx...::-:.:...x...---.::..x...x..x:x.x::..xxx...--------------------........x......:.:.x.:..---------..:.....:..x.:.......x........-....:...:..x...x.x:x..:x..... 38M11D25M4D14M1D15M1D10M3D27M20D24M9D30M1D29M 152/212 71.7% 212/94230402 0.0% 50/212 23.6% 53288092 NA +5761 chr4 + 190214555 57906450 57906449 57906635 186 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAAAATATATATA-TATAAAATATATAT-------ATAAAATATATATAAA-----ATATATATATAAAATATA---TATAAAATATATATATAAAATATATATAAAATATATAAAATATATATAAATATATATATA-AAATATATATAAATATATATA chr4 + 94230402 4618362 4618361 4618564 4618362 4618361 4618564 203 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatataAAAGAATGTA .......::..............x:..x.::......x.x......:x...x.....-....x.x.....:.-------....x.::x.x...:.-----..x...x...:xxx::..---...x.x...........x:xxx..x..x.x.....:..x.:.......x...........-:x..:........x:x..:.. 57M1I14M7I16M5I18M3I60M1I21M 136/186 73.1% 203/94230402 0.0% 17/186 9.1% 53288088 NA +6285 chr4 + 190214555 57906452 57906451 57906685 234 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAAAATATATATATATAAAATATATATATAAAATATATATAAAATATATATATAAAATATATATAAAATATATATATAAAATATATATAAAATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATA-AAATATATATAAATATATATAATAT chr4 + 94230402 4618362 4618361 4618568 4618362 4618361 4618568 207 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT-TATATGTTGTACTAATAATACGGAGATAGATA--------AGGATTTATCTATGCTTCGTAT------TCTAT----tatatatatatatatgtgttagat---------tacatatacaatacatatatacatatatatatatgtatgtatataAAAGAATGTAATAT .......::..............x:....::......x.x....x.:....x......x.x....-.....:xx:..:xx....x.::x.x...x.x.--------.::..x...x...:xxx::...------.x...----........x......:.:.x.:..---------..:.....:..x.:.......x...........-:x..:........x:x..:...... 65M1D32M8D22M6D5M4D24M9D33M1I25M 151/206 73.3% 207/94230402 0.0% 29/206 14.1% 53288090 NA +3373 chr4 + 190214555 57907121 57907120 57907218 98 ATATATAAATATATATAAATATATATATAAATATATATATAAATATATATATAATATATAAATATATATAAATATATATATAAATATATATATAAATA chr4 + 94230402 6244962 6244961 6245057 6244962 6244961 6245057 96 ACATGTAGACACGTATA--TATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACA .:..:..:.:.::....--........:...........:.x:.x:x..:x.:x.:x.x..X:x.:.:...:x:.:.:..............:.x.:. 17M2D79M 63/95 66.3% 96/94230402 0.0% 2/96 2.1% 51662159 NA +3235 chr4 + 190214555 57907174 57907173 57907234 61 ATATATAAATATATATAAATATATATATAAATATATATATAAATATATATATATATATATA chr4 + 94230402 20811760 20811759 20811820 20811760 20811759 20811820 61 ATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTACA ...xx.....x.x...x......:.:.x.........:.:x.........:.....:..:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 37095414 NA +3549 chr4 + 190214555 57910136 57910135 57910189 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.x..x...x.:...........:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -18123075 -76107327 +3180 chr4 + 190214555 57911461 57911460 57911507 47 GTAAAAGGGAAAAAAAAAAAAAAAAAAGAAAGCAAAAGTAAAAGAAA chr4 + 94230402 23740159 23740158 23740205 23740159 23740158 23740205 47 GTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAA ...:.:......................:.x.:....:.:x...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 34171302 NA +3428 chr4 + 190214555 57942694 57942693 57942754 61 GTGCACCTGTAATCCCAGCTACTCGGAAAGCTGAGACAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........:.:..:......x.xx.x...x.:........::.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -18090510 -76139892 +3894 chr4 + 190214555 57953338 57953337 57953486 149 GAGGAATGAAGAAAAAATGATGGGTG---AGAAAGA--AGGAGAGAGAGAAAGAAAGAAGGGAGGAAGAGAGAGGAAGAAGGAAATAAAGGAAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGGAGGGGAAGGGAG chr4 + 94230402 49044663 49044662 49044814 49044663 49044662 49044814 152 GAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCA--GAAAACTGAGACTAGGAAGAGGGAAAATGAG ...:..x...x..:.:..x.x.....---.......--..x..x....::x.xx...x::.:.:.:::....xx:.....:...:x..:.x:..::.x.:...:..:.......x....x.--...::xx.::.xx.:.::.....:..:x... 26M3I7M2I83M2D31M 94/147 63.9% 152/94230402 0.0% 7/147 4.8% 8908675 NA +3345 chr4 + 190214555 57953426 57953425 57953578 153 AGGAAGGAAGGAAG--GAAAGAAGGA--AGGAAGGAAGGAAGGAAGGAAGGGGAGGGGAAGGGAGGGGAGGGGAAAGGAGAGGAGAGCAGAGGAGAGGAGAGGGGAGGGGAGGGGGGAGGTGAGAGGAAAGGAAAAGAAGAGAAGGAA---GGAAAGTGA chr4 + 94230402 56107291 56107290 56107450 56107291 56107290 56107450 160 AGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGA ...:.:...x.x..--....:.....--.....:...:.x.x:x:.:..:x:x..x:....:.x:x.....:...x:.x.......:x.x:...:x:...x:..xx.:x..:xx:x...xxx...:.x.:::....:.::.:x.....---:........ 14M2I10M2I120M3I9M 94/153 61.4% 160/94230402 0.0% 7/153 4.6% 1846135 NA +4228 chr4 + 190214555 57953544 57953543 57953682 139 AGAGGAAAGGAAAAGA----AGAGAAGGAAGGAAAGTGAAGGGAAGGGAAGAG--AAGAGAGGAAGGAAGGAA--AAGGAAGGAAGGGAGG--AAGGAAGGAAGGAAAGAAAGAAAGAAGCAGAAAGTAAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 49044662 49044661 49044810 49044662 49044661 49044810 149 AGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA ....:....:.x....----..:.:x..xx:.....xx...x::x.:....x:--...x...:....:.:..:--..:...:....::...--..::.x.:...:..........x..........::x:.::xx..:.....::.:.. 16M4I33M2I18M2I16M2I56M 94/139 67.6% 149/94230402 0.0% 10/139 7.2% 8908882 NA +3286 chr4 + 190214555 57953560 57953559 57953691 132 AGAGAAGGAAGGAAAGTGAAGGGAAGGGA---AGAGAAGAGAGGAAGGAAGGAAAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGCAGAAAGTAAAAGAAAGAAAGAGAAAGAAACAAAGAAA chr4 + 94230402 45017392 45017391 45017520 45017392 45017391 45017520 129 AAAGAAAGATGGAATAGATATGGCAAGTATTTAGAGAAGGG------GAACAGACTGTAAGGAAAGGCTGTTGGAAAGGAAAAAAAAGCGAAAGAAACAGAATGGGAGAGAAACAACATGAAAGAGACTGATAAA .:....:..x....x:x:x.x..x.:.x.---.......:.------...x::.xx.x......:..xx.xx....:.:.::...:.:x.......:.....x.x:.:.....x..x:x......:..x:.x... 29M3I9M6D88M 82/126 65.1% 129/94230402 0.0% 9/126 7.1% 12936168 NA +3507 chr4 + 190214555 57953648 57953647 57953762 115 AAGAAGCAGAAAGTAAAA--GAAAGAAAGAGAAAGAAACAAAGAAAGAAAGAGGGAGGGAGGGAAGGAAGGAAGGGAAAAGAAGGAAAAGGAAGAAAGGGAAGGGAAGGAAGGAAGA chr4 + 94230402 75729418 75729417 75729530 75729418 75729417 75729530 113 AAGGAGCACAATGTGACAATGAAAGAACCTTAGAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGG----AGAATTAAATGGGAGCAAGCTAAAGGCAGGGGGACAGA ...:....x..x..:.x.--.......xxxx.:...:.....:x...:...:.....::.:.:::...:..::..----....xx...x..:..x...xx..:..x...::.:x... 18M2I55M4D38M 74/111 66.7% 113/94230402 0.0% 6/111 5.4% -17775770 -76454632 +3219 chr4 + 190214555 57977697 57977696 57977752 56 TTTCTCCTTTGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTG chr4 + 94230402 76208459 76208458 76208514 76208459 76208458 76208514 56 TTTTCTTTCCCTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTG ...::::.::x.x.................................x:...x::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -18230762 -75999640 +3058 chr4 + 190214555 57977703 57977702 57977742 40 CTTTGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 + 94230402 18301255 18301254 18301294 18301255 18301254 18301294 40 CTTCTTTTTTCTGTTTGTTGTTGTTGTTGTTTGTTTGTTT ...:x.....:.x........................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 39676448 NA +3248 chr4 + 190214555 57977704 57977703 57977746 43 TTTGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 + 94230402 81178906 81178905 81178948 81178906 81178905 81178948 43 TTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTT ....:x..x..............................x... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -23201202 -71029200 +3285 chr4 + 190214555 57977709 57977708 57977747 39 TTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTT chr4 + 94230402 14999530 14999529 14999568 14999530 14999529 14999568 39 TTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTT .......x...........:................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 42978179 NA +3969 chr4 + 190214555 57978551 57978550 57978621 71 AATAAATTAGATAGTATTAATAGTAATTTGCATTTTT--GTTGTTGTTGCTGTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42595693 42595692 42595765 42595693 42595692 42595765 73 AAGAATTAAGATAGTGCTGTCAATACTCTGGATTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT ..x..x.x.......::.:x:.:..x.:..x......--.............:.................... 37M2I34M 58/71 81.7% 73/94230402 0.0% 2/71 2.8% 15382858 NA +3020 chr4 + 190214555 57978577 57978576 57978635 59 TTTGCATTTTTGTTGTTGTTGCTGTCTTTTTTTTTTTTTTTTTTTTTTAATTTTTAAGA chr4 + 94230402 89555802 89555801 89555860 89555802 89555801 89555860 59 TTCACCTTTCTATTGCTATAGTATTCTTCTTCTTTTTTTTTTTTTTTTAGTTTTCTAGA ..::.x...:.:...:.:.x.:xx....:..:.................:....:x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -31577225 -62653177 +3149 chr4 + 190214555 57978579 57978578 57978626 48 TGCATTTTTGTTGTTGTTGCTGTCTTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 4853190 4853189 4853237 4853190 4853189 4853237 48 TACATGTTTGTTGTTGTTACTTTTTTTTCTTTTTTTCTTTTTTTCCAA .:...x............:..x.:....:.......:.......::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 53125389 NA +3572 chr4 + 190214555 57993119 57993118 57993316 198 CTTCCATATCTCTTTCTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCT-CTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTTTTCC----TTCCTTTTTT---CTCTCAGAGCAATTAAAA chr4 + 94230402 4791757 4791756 4791961 4791757 4791756 4791961 205 CTTTAATATACTTGTCCTATATCGTATTTTGTATTATTCTG-CTTGCTTTCTTTCCCTATACTGGCTGCTATCTTTATTTCTTCTCTCTCCCCCCTCTCCCACAGCCTGCCTTTCCCCTTTGGCAATTCTCTGCTCTGTTTCCAGCCTTACTTTTATCCGTGGATTTTTCCATGGCTCATTTTTTGGCCCCTTAAAGAAAATACAA ...:x....x::.x..:.x.x..x.x:.:.x.x.:x....x-...x.........::.x.x.:x-..x..x.....x.............::..::.:::.x:xx.:.x.:.:.::.....xx.xx:.::..x.:..x::...xx..:.x.:..:x.:.x.xxx.......----:..x......---.:..:.:..x..x..x.. 41M1D22M1I106M4I10M3I18M 120/197 60.9% 205/94230402 0.0% 9/197 4.6% 53201362 NA +3009 chr4 + 190214555 57993143 57993142 57993253 111 TTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCC chr4 + 94230402 81341992 81341991 81342102 81341992 81341991 81342102 111 TTCCCACCCTCTTTACTTCTGCATTTCTGCCTATTTACCAATCTCTTCAAGACACCTCTACCTGTCCCCTCCCTTCCTCAATCCCTTCTTTCCTTCCTTATTTTTTCACCC ...:.x.:......x:....x:x.....x:..x.:.x..xx.:::...xxxx:x:..::x.::x:::............xx.:............:..:x::..:::x... 111M 65/111 58.6% 111/94230402 0.0% 0/111 0.0% -23348849 -70881553 +3610 chr4 + 190214555 57993146 57993145 57993297 152 TCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTC-CCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCCCTCCCTCCCTCCCT---TCCTTCCTTCCTTTTTCCTTCCTTTTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTT--TGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTT------CTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .:...x...:x..x:::.:.......:....x.:.x:.:x....--.x.x..x....:...x...:.:-:x...x.:::.x:........:..------....xxxx..:x......:x::.:.:.---......:..:....:....:.x..:.. 44M2D22M1I24M6D27M3I27M 94/144 65.3% 148/94230402 0.0% 12/144 8.3% 7816879 NA +3155 chr4 + 190214555 57993201 57993200 57993256 56 CTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCC chr4 + 94230402 25163667 25163666 25163718 25163667 25163666 25163718 52 CTCCCTTTTCTTCCCGTCCG----TCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ...:..:...:....x...x----..........:.............:..:.:.. 20M4D32M 43/52 82.7% 52/94230402 0.0% 4/52 7.7% 32829534 NA +3450 chr4 + 190214555 58077637 58077636 58077721 85 AACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACA chr4 + 94230402 78347546 78347545 78347630 78347546 78347545 78347630 85 AACAAAAGAAAAAACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....:..x:...x:.xxxxxx..x..x....x...x..:.......xx..:.:.xx..:......................x.. 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% -20269909 -73960493 +3064 chr4 + 190214555 58077658 58077657 58077715 58 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACA chr4 + 94230402 78347573 78347572 78347630 78347573 78347572 78347630 58 CAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x...x..:.......xx..x.x..x..:.........:.:.:........x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -20269915 -73960487 +3291 chr4 + 190214555 58077659 58077658 58077723 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACA chr4 + 94230402 78347566 78347565 78347630 78347566 78347565 78347630 65 AAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ....x..x....x...x..:.......xxx.:.:.xx..:.......:..............x.. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -20269907 -73960495 +3163 chr4 + 190214555 58077660 58077659 58077719 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 + 94230402 78347571 78347570 78347630 78347571 78347570 78347630 60 AACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ..x....x...x..:.......xx..x.:.xx..:.........:............x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -20269911 -73960491 +3343 chr4 + 190214555 58077660 58077659 58077725 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 78347565 78347564 78347630 78347565 78347564 78347630 66 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x..x....x...x..:.......:xx.:.:.xx..:.....:.:..............x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -20269905 -73960497 +3259 chr4 + 190214555 58077664 58077663 58077719 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:.....:.:.x.:.::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 56582664 NA +3059 chr4 + 190214555 58077668 58077667 58077726 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.....:.:.:..x:.....:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 6605178 NA +3244 chr4 + 190214555 58077668 58077667 58077729 62 AAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACATATA chr4 + 94230402 74671056 74671055 74671117 74671056 74671055 74671117 62 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ..:..x.x.x.....xx.:x.:..............................x.x.x.x... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% -16593388 -77637014 +3113 chr4 + 190214555 58077672 58077671 58077733 62 AAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACATATATATA chr4 + 94230402 74671056 74671055 74671117 74671056 74671055 74671117 62 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ..:..x.x.x.....x..xx.:............:.:...............x.x.x.x... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -16593384 -77637018 +3094 chr4 + 190214555 58077686 58077685 58077769 84 AATATATATATATATATATACACACACACACACACACACATATATATACATATATATACACACAAATATATATATACATATATA chr4 + 94230402 54005687 54005686 54005766 54005687 54005686 54005766 80 AACACATATGTATTTATATATACATACACACACACACAGAAATCTGT-CCTGT---TGCACAAAAAGTTACATATGTATAAGTA ..:.:....:...x......:...:.............x.x..x.:.-.x.:.---.:....x...xx..:....::...x:.. 47M1D5M3D28M 59/80 73.8% 80/94230402 0.0% 4/80 5.0% 4071999 NA +3067 chr4 + 190214555 58077688 58077687 58077726 39 TATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409084 4409083 4409122 4409084 4409083 4409122 39 TACATATATATATATATACACACACAGAGACACACACAT ..:.......................x.x.......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 53668604 NA +3030 chr4 + 190214555 58077693 58077692 58077743 51 ATATATATATATACACACACACACACACACACATATATATACATATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:.:....x.x....:........:.:........x.:x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 11936837 NA +3092 chr4 + 190214555 58077694 58077693 58077742 49 TATATATATATACACACACACACACACACACATATATATACATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x....................x:...xx....:...::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -31746238 -62484164 +3091 chr4 + 190214555 58077696 58077695 58077756 61 TATATATATACACACACACACACACACACATATATATACATATATATACACACAAATATAT chr4 + 94230402 89823932 89823931 89823992 89823932 89823931 89823992 61 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATAT .......:x.:..................x....xx..:.....::..:x.xx.:x..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -31746236 -62484166 +3589 chr4 + 190214555 58157402 58157401 58157479 78 TGTCTGTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACATCTCTCTCTCTTATATATGTATATATATAG chr4 + 94230402 60831528 60831527 60831602 60831528 60831527 60831602 75 TATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACA---CGCACACTTCTAAATACATTTATATGG .:...:.....x.............x.x.......:.:....:.....---.x.x.x...x..x..::..x.....:. 48M3D27M 58/75 77.3% 75/94230402 0.0% 3/75 4.0% -2674126 -91556276 +3033 chr4 + 190214555 58157547 58157546 58157610 64 GTATATATATGTGTGTATATATACATATATATGTATGTGTGTATATATATATGTATATGTGTGT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...........::...:.x......x::..x:::....:...:...x.:.:.x.....:.x... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -18552044 -75678358 +3842 chr4 + 190214555 58157618 58157617 58157724 107 TATACACCTACATATGTGTAGGTCTATATATGTATACACACATATA--CATATATATACACATATATATACACACAAACACGTATATGTGTGTGTATATACATACATGC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......:x.:::.x.x...:..:x...x...:.:...x........--.:.:..:x..:..:...:..:x..::.xxx:::..........:..x....:...:..::. 46M2I61M 70/107 65.4% 109/94230402 0.0% 2/107 1.9% 37048424 NA +3087 chr4 + 190214555 58172001 58172000 58172073 73 CAGTCTCTTTTTCCCTTCAAGTTTTTGTTTGTTTGTTTGTTTTTGAGATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 85388108 85388107 85388180 85388108 85388107 85388180 73 CACTCTCAATATTCCTCCTAAATGTTTTTTTTTTGATGTTTTTTGAGGTTTTTTTTTATGTTTTTTGTTTTTT ..x....xx.x.:...:.x.:x.x..x...x....x.xx........:.........x.x......x...... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -27216107 -67014295 +3174 chr4 + 190214555 58172004 58172003 58172071 68 TCTCTTTTTCCCTTCAAGTTTTTGTTTGTTTGTTTGTTTTTGAGATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34734826 34734825 34734893 34734826 34734825 34734893 68 TCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTT .....:.:...:..:..x..::.x...x.:::x..:....x.::..x...........x:........ 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 23437178 NA +3250 chr4 + 190214555 58172020 58172019 58172073 54 AGTTTTTGTTTGTTTGTTTGTTTTTGAGATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59215495 59215494 59215548 59215495 59215494 59215548 54 AGTTGTTGGTTTTTTGTTTGTTTTGGGGGCTTTTTTGTGCTTTTTTTTTTTTTT ....x...x..x............x.:.::......x.x:.............. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -1043475 -93186927 +5843 chr4 + 190214555 58185083 58185082 58185198 116 AGACCCTGTCTCTCTCTCTCTCTCTCTCTCACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAAAGAAAGAAGGAAAGAAAGGAAAACGCGAAAGAAAAGAAA chr4 + 94230402 75248044 75248043 75248144 75248044 75248043 75248144 101 AAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagaga-----gagagagagaaaaaaaaagaaagaaagaaagaaa----------aaagaaaagaaa .:.:...x:...................x..............x.:.:.:.:.:.-----:.:.:.:......:...........:........----------............ 55M5D34M10D12M 84/101 83.2% 101/94230402 0.0% 15/101 14.9% -17062961 -77167441 +4833 chr4 + 190214555 58185091 58185090 58185227 137 TCTCTCTCTCTCTCTCTCTCTCACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAAAGAAAGAAGGAAAGAAAGGAAAACGCGAAAGAAAAGAAATATCAGGGGAACAAGCCCCCAATATTTCA chr4 + 94230402 75248050 75248049 75248164 75248050 75248049 75248164 115 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagaga-------gagagagagagagaaaaaaaaagaaagaaagaaag-----------aaaaaagaaa----agaaaATCCTATCCCAAGTATATCA .::................................x.x.:.:.:.-------:.:.:.:...:.::....:......:.........-----------.:........----..:::.x.xx::...x.:...x... 45M7D35M11D10M4D25M 87/115 75.7% 115/94230402 0.0% 22/115 19.1% -17062959 -77167443 +3070 chr4 + 190214555 58185092 58185091 58185129 38 CTCTCTCTCTCTCTCTCTCTCACACACACACACAAAAA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA ...................x.....:........x... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 45583788 NA +3070 chr4 + 190214555 58185094 58185093 58185131 38 CTCTCTCTCTCTCTCTCTCACACACACACACAAAAAAA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA .........................:......x.x... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 45583790 NA +3169 chr4 + 190214555 58185099 58185098 58185165 67 TCTCTCTCTCTCTCACACACACACACAAAAAAAAAAAAATAAATAAAAAAAA----GAAAAGAAAAGAAAG chr4 + 94230402 54515454 54515453 54515524 54515454 54515453 54515524 71 TCACACCCTCCTCAACACACACACACAAAGAAAAAAAAGTAAAATAAAAAAATCTTGAGAGAGAGAAAAAG ..x.x.:...:::x...............:........:....xx.......----..:.:::.:.:.... 52M4I15M 50/67 74.6% 71/94230402 0.0% 4/67 6.0% 3669645 NA +3128 chr4 + 190214555 58185112 58185111 58185205 94 CACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAAAGAAAGAAGG----AAAGAAAGGAAAACGCGAAAGAAAAGAAATATCAGG chr4 + 94230402 74671094 74671093 74671191 74671094 74671093 74671191 98 CACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAACAAAGCAGAATTAAGATTTCAGG ......................x.:x....x....xx..:..x:x.:.....:...x:----...x..:xx.x...:x::x....xx:.:..x..... 58M4I36M 65/94 69.1% 98/94230402 0.0% 4/94 4.3% -16485982 -77744420 +3083 chr4 + 190214555 58185113 58185112 58185198 86 ACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAAAGAAAGAAGGAAAGAAAGGAAAACGCGAAAGAAAAGAAA chr4 + 94230402 58764820 58764819 58764901 58764820 58764819 58764901 82 ACACACACACACACACAAAAAAA---AAACAAATCAAAGAACTGCAAA-CAAGCATGAAAGAAAAGAATGTAAGGGGGAAAAAAAA .............x.x.......---...:...xx......xx.x...-x...x.x........:...x:::x.:::.....:... 23M3D22M1D37M 61/82 74.4% 82/94230402 0.0% 4/82 4.9% -579707 -93650695 +3315 chr4 + 190214555 58185113 58185112 58185205 93 ACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAAAGAAAGAAGGAAAGAAAGGAAAACGCGAAAGAAAAGAAATATCAGG chr4 + 94230402 74671091 74671090 74671183 74671091 74671090 74671183 93 ATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAACAAAGCAGAATTAAG .:...........x.x...........:x.........xx...:.x:x::.........x:.:xx:..x.x.:x.x.:x....x.:x..:.:. 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% -16485978 -77744424 +3065 chr4 + 190214555 58186213 58186212 58186256 44 CAACAAAGAAAGAAAGAAGAAAAAGAAAGAAAGAAAGAGAGAGA chr4 + 94230402 14018850 14018849 14018893 14018850 14018849 14018893 44 CAACAAAAATAGAAATAAGAGAAAGAAAGAGAAAAAGAGAGGGA .......:.x.....x....:.........:.:........:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 44167363 NA +3181 chr4 + 190214555 58186306 58186305 58186380 75 AGAAAGAGAGAGAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAACGAGAAGAAAAAAGAAAAGAAAGAAAAG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG ..:.......::..:...x..::..x.:.x:::x.::.::...x...::x...x.x:.................. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -13414720 -80815682 +3430 chr4 + 190214555 58193915 58193914 58194036 122 AGGTATATATGTGTGTATATATGGGTGTATATATACACACATATGTGTGTGTATGTATATATGGGTGTATA---TATACACACATATATACACACATATGTGTGTATGTGTGTATATATGTGTGT chr4 + 94230402 32744911 32744910 32745030 32744911 32744910 32745030 120 AGGAATTGATGTGGGCACATTTTGTTGCA---GCCCACAACAATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAG--GTGTGCATGTGTGTATGTATGTATAT ...x..xx.....x.:.:..x.x.x..:.---::x....xxx....::::x...x...x...:x:.x..:.---....x.:.....:.........x--.....:..........:.....:.:. 29M3D39M3I23M2D26M 81/117 69.2% 120/94230402 0.0% 8/117 6.8% 25449004 NA +3602 chr4 + 190214555 58193956 58193955 58194131 176 TATGTGTGTGTATGTATATATGGGTGTATATATACACACATATATACACACATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACAC---ACATATGTGTGTGTATATATGTGTGTATATATACACACA-TATTTGTGTGTATATATGTGTGTATA chr4 + 94230402 79265520 79265519 79265678 79265520 79265519 79265678 159 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---------------------ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA .:.........:::.:.:.:...x........:.:....:.:.::....:..x.::.:.x.:...x:::.---------------------.:.:x.x.:....x..:...---:.x.x.x..x.....:.x...::.x.x.:..x:::.x..-:.:....:.x....:..x.:..x:.. 70M21D20M3I39M1I26M 97/155 62.6% 159/94230402 0.0% 25/155 16.1% -21071564 -73158838 +3035 chr4 + 190214555 58193958 58193957 58194022 65 TGTGTGTGTATGTATATATGGGTGTATATATACACACATATATACACACATATGTGTGTATGTGT chr4 + 94230402 79265520 79265519 79265584 79265520 79265519 79265584 65 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .........:..:..:.:..x.xx.:........:...::.:.:.....::.x:::.:.x..... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -21071562 -73158840 +3722 chr4 + 190214555 58193958 58193957 58194069 112 TGTGTGTGTATGTATATATGGGTGTAT--ATATACACACATATATACACACATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.:::...:...x.x.:....:....--....::..x..:......x.------....::x.:.::....:..:x::..:x.x.........:...:..x....::.::.... 27M2I20M6D59M 71/106 67.0% 108/94230402 0.0% 8/106 7.5% 37084764 NA +3112 chr4 + 190214555 58193983 58193982 58194044 62 ATATATACACACATATATACACACATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGT chr4 + 94230402 22600210 22600209 22600271 22600210 22600209 22600271 62 ACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT .:..::.x......::.....x.x......:.:.x.......:......::..:.:..:x.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 35593773 NA +3726 chr4 + 190214555 58194003 58194002 58194105 103 ACACATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGTATATATGTG----TGTATATATACACACATATGTGTGTGTATATATGTGTGTATATATACACACA chr4 + 94230402 21109195 21109194 21109301 21109195 21109194 21109301 107 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:....:.....x.x....x.::...x.:.:....:x::::....:x:...----.:..::...::..x...::x.x.........:...:..x....::.::.... 51M4I52M 67/103 65.0% 107/94230402 0.0% 4/103 3.9% 37084808 NA +4361 chr4 + 190214555 58194017 58194016 58194141 125 ATGTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACACATATGTGTGTGTATATATGTGTGTATATATACACACATATTTGTGTGTATATATGTGTGTATATATACACACA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTG----GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACG------TATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x....:........x.x....----x::..:.x.....:...x.......::x:.....:x...::.------...::..x...::..x.........:...:..x....::.::.... 27M4D42M6D46M 81/115 70.4% 115/94230402 0.0% 10/115 8.7% 37084830 NA +3645 chr4 + 190214555 58194018 58194017 58194140 123 TGTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACACATATGTGTGTGTATATATGTGTGTATATATACACACATATTTGTGTGTATATATGTGTGTATATATACACAC chr4 + 94230402 21109190 21109189 21109302 21109190 21109189 21109302 113 TGCTTATACATGTGTGTCTCTGTGGGCGTA----TTTATATGTACTCACATATACTCGTGTACCTATACGTATG------TACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:x.:..:..:.....x.x....x.::..----.x.:...:..:x....:...:x:....::x....:..:..------...x..:::x.:.....:...:.:.:..x:...::..:..... 30M4D40M6D43M 74/113 65.5% 113/94230402 0.0% 10/113 8.8% 37084828 NA +3131 chr4 + 190214555 58194019 58194018 58194082 64 GTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACACATATGTGTGTGTAT chr4 + 94230402 86633927 86633926 86633990 86633927 86633926 86633990 64 GCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .:...::.:::.:x..:.....x......:...:....:........:x::....::.x..... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -28439908 -65790494 +3142 chr4 + 190214555 58194063 58194062 58194133 71 ACACACATATGTGTGTGTATATATGTGTGTATATATACACACATATTTGTGTGTATATATGTGTGTATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ..........x::::..:.x.:.::..::..:.x.x.:.:::............:......::..:.::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 35593865 NA +4256 chr4 + 190214555 58194101 58194100 58194225 125 ACACATATTTGTGTGTATATATGTGTGTATATATACACACATATTTGTGTGTATATATAC------ACACATATTTGTGTGTATATATGTGTGTATATATACATACACGTGTGT---GTATCTGTGTGTATATA chr4 + 94230402 21109195 21109194 21109328 21109195 21109194 21109328 134 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA .:....:.x...x.x.:.:x::..:.x.....:...x.......x:x:.....:x.....------..x...::..x.........:...:..x....::.:::.....x.xx.---..x......x..:..:. 60M6I48M3I17M 86/125 68.8% 134/94230402 0.0% 9/125 7.2% 37084906 NA +3330 chr4 + 190214555 58194116 58194115 58194181 66 TATATATGTGTGTATATATACACACATATTTGTGTGTATATATACACACAT-------ATTTGTGTGTATATA chr4 + 94230402 63753103 63753102 63753174 63753103 63753102 63753174 72 TATATA-ATGGGTATAAATATGCACATATTTGTGTGTATATAGACACACAGACATGCAATTTTTATGTACATA ......-:..x.....x...::....................x.......x-------....x.:....:... 6M1D44M7I15M 55/65 84.6% 72/94230402 0.0% 8/65 12.3% -5558987 -88671415 +3602 chr4 + 190214555 58194135 58194134 58194209 75 ACACACATATTTGTGTGTATATATACACACATATTTGTGTGTATATATGTGTGTATATATACATACACGTGTGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ...........::::..:.x.:.:.::..:.:.xxx:.:.......x.......:.....:...:.....:x... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 35593937 NA +3550 chr4 + 190214555 58194150 58194149 58194291 142 TGTATATATACACACATATTTGTGTGTATATATGTGTGTATATATACATACACGTGTGTGTATCTGTGTGTATATATACATACACGTGTGTGTGTATCTGTGTGTATATATACATACACGTGTG-----TGTGTATGTGTGTATATA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGT--------ACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:x....:.::::::.x.:....x.::...x.:.:....:x:.:.:....x.....::x...x:..:...--------.:x..:.:x.x.......x.....:.:x....:...:...::.x.-----x..x.x....x..:..:. 71M8D45M5I18M 84/134 62.7% 139/94230402 0.0% 13/134 9.7% 37084960 NA +3325 chr4 + 190214555 58194152 58194151 58194221 70 TATATATACACACATATTTGTGTGTAT--ATATGTGTGTATATATACATACACGTGTGTGTATCTGTGTGTA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x..........xx..x.:...--:......:....:..........:..::.:x...x.x::.... 27M2I43M 53/70 75.7% 72/94230402 0.0% 2/70 2.9% 16445056 NA +3147 chr4 + 190214555 58194190 58194189 58194260 71 TATATACATACACGTGTGTGTATCTGTGTGTATATATACATACACGTGTGTGTGTATCTGTGTGTATATAT chr4 + 94230402 76709592 76709591 76709650 76709592 76709591 76709650 59 TATATATATGCA------------TGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATAT ......:..:..------------.....x....:.x:...x...:...:.............x....... 12M12D47M 49/59 83.1% 59/94230402 0.0% 12/59 20.3% -18515402 -75715000 +4026 chr4 + 190214555 58194216 58194215 58194335 120 TGTGTATATATACATACACGTGTGTGTGTATCTGTGTGTATATATACATACACGTGTGTGTGTATGTGTGTATATATACACACACGTGCGTATATATGTGTATATATGTGCACGTGCACG chr4 + 94230402 21109190 21109189 21109303 21109190 21109189 21109303 114 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATG------TACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..:x....:..:::.::x:x....x.:....:.:.:....:x:.:.:....x.....::x.:..:..:..------...x..::.x.x:..:...........:x..:....:.::.... 70M6D44M 73/114 64.0% 114/94230402 0.0% 6/114 5.3% 37085026 NA +3005 chr4 + 190214555 58194302 58194301 58194357 56 TGCGTATATATGTGTATATATGTGCACGTGCACGTGTATGTGTGTATATACGTGCA chr4 + 94230402 73100554 73100553 73100609 73100554 73100553 73100609 56 TACGTATCTAGTTGTATCTATGTACATGCGCACCTGTGTGTGTGTGTATAAATACA .:.....x..xx.....x.....:..:.:....x...:.......:....x:.:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -14906252 -79324150 +3925 chr4 + 190214555 58194364 58194363 58194528 165 AGTGTATGTGTGTATATACGCACA-CGTGTGTGTATGTGTGTATATATGCGCAAGTGTGTGTGTATATATGTGTATATATATGCACGTGTGTGTATATATGTGTATATATGTATATACATGTTTATACATATACATATGTGTGTATATATACATATGTGTGTATAT chr4 + 94230402 5214174 5214173 5214321 5214174 5214173 5214321 148 AGTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCG------------------CAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....x:x.....x....:x.....-.:xxx...:.x.....:x:..:x..:.:x:.x:......::::.x....x.::.:.::..:x.::......::..x..:..:.:...:::------------------..x.:......:.::..:..x.......:.:.. 24M1I90M18D33M 91/147 61.9% 148/94230402 0.0% 19/147 12.9% 52980190 NA +3402 chr4 + 190214555 58194398 58194397 58194551 154 TGTGTGTATATATGCGCAAGTGTGTGTGTATATATGTGTATATATATGCACGTGTGTGTATATATGTGTATATATGTATATACATGTTTATACATATACATATGTGTGTATATATACATATGTGTGTATATATATACGTTTATGCATGTATACA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACG--------TATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-------GTTTCTGTGGGTGTACA ..:x.:..:..:..:.:xxx....x.:....x...:....:x:.:..::..x:....::x....:.--------.:.:..:x....:..x.:::....::.:.:..x:...::..:..:.:.x.xx..:.-------....x..::x..:.... 66M8D56M7D17M 84/139 60.4% 139/94230402 0.0% 15/139 10.8% 37085208 NA +3406 chr4 + 190214555 58194426 58194425 58194505 80 TATATATGTGTATATATATGCACGTGTGTGTATATATGTG----TATATATGTATATACATGTTTATACATATACATATGTGTG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x...:.x.:.:..:::..........xx....:----..:.......x............:..:.:.:.:.::::.. 40M4I40M 56/80 70.0% 84/94230402 0.0% 4/80 5.0% -27640107 -66590295 +3104 chr4 + 190214555 58196215 58196214 58196279 65 AGCTAGGACCATGTATGTATGTGTGTATACACACACAGACACACACACACATATATATATATACA chr4 + 94230402 61270771 61270770 61270835 61270771 61270770 61270835 65 AACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .:.:.x..x:..:.x.....:.:......:..:...:x.....x....x...:....x:..:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -3074556 -91155846 +11802 chr4 + 190214555 58210422 58210421 58210858 437 CTGACAGTTACAGATCAGCTGGCTTGATTCAGTCAATTCCACAATATGAGTTGCTTGACCTTGATATATTTTCTAATGCTATTTCTATCTACTCCTCAATTTCTCTGACTTATATGTCTTCATTGTAACCCATGTTTTATCTCTCCTTAGCTGATTTCATAAATTCTTGTCTTCTAGTCACCTGTCTTATACTATCTCAGTATACCATCTAATAGAGGATGCCCAT--TAATAGCAGTAGAAAACTCTAAACTGCAGTAAATTATATGACTAGCATTTTTATCTAGGCTTTTCTCCTCATAAAATATGTGT-TTTTCCCCATGTCCGTCCTGAATAGGCTTTGTCAAATATGAACAGCACATAAATATTTGATTTATTACATTCCTATCCATAGCACCAAAATTGAAATGCCAAACCTAAAGCACCATTTGTCATCAGGG chr4 + 94230402 48582111 48582110 48582529 48582111 48582110 48582529 419 CTAACAGTTACAAATCAATCTGTTCGGCTAGTTCAGCCCTTTAATATTAGTGGCTTGACCTTACTACATCTCCTAACATCATTTCCATCTATTCCTCTCTTCCTATCACTTAGATATGTCTGTT-TAGCCTGTGGTGCATCTTGTCTTGTTTGA-GTCATAAATCTTTCCCTTTGAGTCAGAAGT-GAAAGGTATCTTGGTGTTCCATCATATAAAGCATAGCTGTGACACTGCCGTTAAAGAA---TGGACTGTAGTAAATTTTCTGCCTGAGTTTTTTGTGTGG--------------AAAATATATCTATTTTTCCTATATCCATCC-AAATATCCATTGTTAGAAAGGGACAGCATATAAATATTTGATTTATAGTCAATCCATTGATAGCACTAAAGTTGAAATTCTGCTCCTGGAGTACTTTATGTCATAGAGG ..:.........:....:::x.:.:.::.x:x...:::.:x:.....x...x..........:x..:..:.:....::::.....:.....:.....xx..:..x.x.....x..:.x.:::..-..:..::..x.x:....:x:...:x:...-x........::..x:...:x.....xxx..-xx.x:x.....::..:.x.....xx...:..x..:x.::.--:.x.:x.:x..:.:..---.::....:........x.x..x..::xx.....:.x.:.--------------.......:.x.-....:..:..:...:...-:....xx.x....:.:.x.x.:......:.................x::xxx:.:..:x.......:...:.......x.::xx...::..:..:x.x......x::.. 124M1D29M1D30M1D40M2I16M3D39M14D11M1I18M1D109M 271/416 65.1% 419/94230402 0.0% 24/416 5.8% 9628311 NA +3082 chr4 + 190214555 58233311 58233310 58233360 50 AGTAGTTTTTTTTTTATTTTTTCTCTTCTTTTTTCCTCTATTAGTAAATC chr4 + 94230402 5856361 5856360 5856410 5856361 5856360 5856410 50 AGTAGTTTTTTTTTTTTTTTTTATCTACTTCTTTCCTCAACTAGCAGTTC ...............x......x...x...:.......x.:...:.:x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 52376950 NA +3039 chr4 + 190214555 58302375 58302374 58302423 49 AAAAAAAAAAAAAAAAAAAAAAAAAAACACCAAAAAAAAAACTTGCTTG chr4 + 94230402 37021144 37021143 37021192 37021144 37021143 37021192 49 AAAAAAAAAAAAAACACAAAACCAAAACACCAAGAAAAACCCTTACTTG ..............x.x....xx..........:.....xx...:.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 21281231 NA +3489 chr4 + 190214555 58333176 58333175 58333283 108 ATCTCACATGCAAAGACACATATAGGCTCAAAATAAA----GGGATAGAGGAAGAGCTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 2649238 2649237 2649349 2649238 2649237 2649349 112 ATCCTAAGAGCATAATCACTTAGAACTTCAAAATAGAAATAGCAATAAAAAAAGAGCTGCATAGTTGAGAGAATGCTAAGAAAAATAAAAAAGAGAAAAAATGGAAAAAAGA ...::.x:x...x.:x...x..x.:x:........:.----.x:...:.::.......:.xx..:x:.x:...x..x..:.....x......:.:......x::......:. 37M4I71M 71/108 65.7% 112/94230402 0.0% 4/108 3.7% 55683938 NA +3334 chr4 + 190214555 58352768 58352767 58352825 58 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGAAGACAGAGAGAGTGCAA chr4 + 94230402 87420509 87420508 87420566 87420509 87420508 87420566 58 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAA .:...........:.:........:.x.x.x.....:.:x:...x.......x..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -29067741 -65162661 +3034 chr4 + 190214555 58373258 58373257 58373336 79 ATTTATTTATTTTTATTTTTATTTTATTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGT chr4 + 94230402 84440971 84440970 84441049 84440971 84440970 84441049 79 ATTCGTTTTTCCTTATTTTATTTCTATTTTATTGCCATTTTGCTCTGGGTTTGTGAGCACAGGTGCCTGCTGGGGAGGT ...::...x.::.......xx..:.........:::...x.:..:.::....xx.:.:...x....x::x..x.x.... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% -26067713 -68162689 +3005 chr4 + 190214555 58393492 58393491 58393576 85 TTTTTAAACTTTAGATATTATTTTACCAAAAAAAATGTAGAATAATTCTCACTCTTCGGTGCTACTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 31894593 31894592 31894677 31894593 31894592 31894677 85 TTTTAAAACTTTACCTACCATTTCTTCAAGAAAGCTATGCTGTAGTTTGCAGTTCTTCAGATCACTTTCTTTCTTTTTTTTTTTT ....x........xx..::....:x:...:...:x.:.:xx:..:..:x..x.::.:x:x:::.....:...:............ 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 26498899 NA +3122 chr4 + 190214555 58433183 58433182 58433243 61 TCTTTATCTTAGCCTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 37898258 37898257 37898318 37898258 37898257 37898318 61 TTTTTATTTTATTTTAATAAGACAGTAAAAAAAACAACAATAGAAAAAAAAAAAACAAAAA .:.....:...x::..:...:.x.:x........x..x..x.:............x..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 20534925 NA +3054 chr4 + 190214555 58449156 58449155 58449215 60 GAATTCTTACTCTGATATTCCCCTTGCGTTTTTGTTTGTTTGTTTTTTTGTTTTTTCTGG chr4 + 94230402 45056463 45056462 45056521 45056463 45056462 45056521 59 GGACTCTCA-TGTGACAATGCCATTGTTTTTTTGTTTGTTTGCTTTTTTTTTTTTTCTGG .:.:...:.-.x...:.x.x..x...:x..............:......x.......... 9M1D50M 47/59 79.7% 59/94230402 0.0% 1/59 1.7% 13392693 NA +3060 chr4 + 190214555 58452972 58452971 58453014 43 TACTCATTATGAGTATATATATATATATATATACACACACATA chr4 + 94230402 83331406 83331405 83331448 83331406 83331405 83331448 43 TAATCATTATGTGTGTATATGTGTATATATATATACACACATA ..x........x..:.....:.:..........:......... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -24878434 -69351968 +3217 chr4 + 190214555 58464172 58464171 58464242 71 ACATGGTGGCGGGCACCTGTAGTCCCATCTACTCGGGAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....:.--...x......:...x.....:.::........x.xx.x...xx..x.........:.. 11M2D58M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -17569024 -76661378 +6511 chr4 + 190214555 58466871 58466870 58467121 251 TGATGAGCTTGTTCC------------ATGGTCAATGGTGGAAATCAATTTTCATTTAAGAACCTACAGTACTTAGCCTTTTTCCTTTTCTGTAGTCTTTATTGATTCTT----CTTTCCATAGAAAGACACTATCCATTCTACTGTAGCCAGGCACTGTTT-CCAAGATTCCATAATAATGGAGTAAAAGTTCTCAGAGGGCTTTCCTAGACTGGCAACATGCCCATTTTTTAATTTGCAGATGAAGGCTATTCTATCTATCATTGA chr4 + 94230402 48673127 48673126 48673385 48673127 48673126 48673385 259 TGATAAGCTTGTTCCTTTGCCCTGGGACTGGACAATGGACAAAATCAATTCTCATTTAAGAAGCTACAGCCGTTTGCCTTTTCCTTTTCCTGCTGCCTTTATTGATCCCCTGAGCTCTC-----AGAAACACTATCAATTCTGCTGAAGCCCAGCTTTATTTGAAAAGGAACTTTGATGATGGC-TACAGTTCCTGAGAGAAGCATCCTCTGTAGATTCCTTGCTC---TTCTGAGAGCCAAATGAAGGCCATTTATCCCATCTGTGA ....:..........------------x...x......xx:.........:...........x......:xx..x.......:.:...:...:x.:..........:.::----..:..-----.:.:........x.....:...x....x:..x:.:...-xx...:xx.:x.:..:....x-..x.:x.:..x....::x:x....xx::x.::xx.x...:.---..:.:.xxxx..:........:...:xx:.:...xx... 15M12I83M4I5M5D38M1I21M1D41M3D39M 164/242 67.8% 259/94230402 0.0% 26/242 10.7% 9793744 NA +8231 chr4 + 190214555 58473235 58473234 58473487 253 AGCTTCTTGAATGAGGACAGAAGCTGAATGCTGTATAAAATAATTATTAGTGCTTATAGAATAAACAAATGTTAACAATGGCTTTGATTCCTAGAGTAAAGATACAGTGTTCGCTGATCAAAATATTGATAATTAGCTCTGA--TTTTACTGTTGTTGAA----AAATGTTATTTAATGGATTTCGAAATGCTTAATTGTTTGCTGCCCTCAGTAAAACATTTATATAAATGAATAATCAACATATTTTTATTTGCCCA chr4 + 94230402 48675660 48675659 48675914 48675660 48675659 48675914 255 AGCTTCTTATTTGGAAGTGGGCACTAAGCTTT-TATAAAATAATCATTAGTACTTCTAGAATAAGAAAATACAAATGGTGACCTTGATTCCCTGCCCAAGTGTACAAGGTTCACTAAGC-TGATATTGGTAATTAGCTCTGATTTTTTACTACAGCTGAAGCACATAAATTATTTAATAAGTTTTGAAGTGCCTGAATGTGTTTCCTTCTCAATGAAAAATTTATGCTATGGGGCAATCAAC--AGTTTTCTCTGTCCA ........:xx..::::::.:x:..:.::x:.-...........:......:...x........:x....::x..:::..:.:........:x.xx:..:x:....:x....:..:.x.-x:......:.............--.......::x.:....----.x.x:.........:::...:...:...:.:.x...x.x::x::....:.:...x......::x.xx.:::.......--.x....x.:..:... 32M1D86M1D22M2I16M4I78M2D15M 166/249 66.7% 255/94230402 0.0% 10/249 4.0% 9797575 NA +4041 chr4 + 190214555 58473364 58473363 58473577 214 TAATTAGCTCTGATTTTACTGTTGTTGAAAAATGTTATTTAATGGATTTCGAAATGCTTAATTGTTTGCTGCCCTCAGTAAAACATTTATATAAATGAATAATCAACATATTTTTATTTGCCCATTGAGGGAAAGAAAATTAAAGAAGTCTCTTAATAACTTTCTTAGTAAAAATTTTAAGATAAATGTGTTTTTTTATAAAACTCTTACTCCT chr4 + 94230402 48678342 48678341 48678525 48678342 48678341 48678525 184 TAATTAGTGGTGACTTCGGTGTCATTGAAAGATATTGTTTAATGCATTTTGAAGAGCTTAACTGC------CTTTTCttaaaaaaaatatatatatatataatCCCCAAACCTGCA-TTGCTTGCCAAG-----------------------TTGCTGTCTTTTTCAAGAAAAGCATTGAAAAGGTAATTTTCTTTTTTAAAGTTCCTATTTTT .......:xx...:..::x...::......:..:..:.......x....:...:x......:..:------.::.:xx.....x.xx......x..:x......xx..x.::.x:.-....::::::..-----------------------..:x.:x....:.:.:x....::x..:.:.x::xx:.x..:....x....::..:..:.::. 65M6D45M1D12M23D62M 114/184 62.0% 184/94230402 0.0% 30/184 16.3% 9795022 NA +8778 chr4 + 190214555 58479207 58479206 58479414 208 TATGACATAGCCATTGATGCCTGTAGAATAAGCAAATGCAAACAATGACCTTGATTCCAAGAATAAGTATGCAAGGTTCACTATGCAGAGATACTGGGTAATTATCTCTGA--TTTTACTGTTATTGAAA-ACATTAATTATTTAATGAG-TTTGAAGTGCTTAA--GTGTTTGCTTCTGACTTAAAAAAATGTACTCTTCAGTAATCAACAGT chr4 + 94230402 48675692 48675691 48675902 48675692 48675691 48675902 211 TATAAAATAATCATTAGTACTTCTAGAATAAGAAAATACAAATGGTGACCTTGATTCCCTGCCCAAGTGTACAAGGTTCACTAAGCTGATA---TTGGTAATTAGCTCTGATTTTTTACTACAGCTGAAGCACATAAATTATTTAATAAGTTTTGAAGTGCCTGAATGTGTTTCCTTCTCAATGAAAAATTTATGCTATGGGGCAATCAACAGT ...:.x...::....::.:.:.x.........x....:....:::.............xx.xx:....:.:............x..x..x.---.x........x......--.......::x::....:-....x...........:..-..........:.:.--......x.....x.x.x.....xx.:.:..x.xx:.:.......... 91M3D17M2I17M1I19M1I14M2I47M 156/205 76.1% 211/94230402 0.0% 9/205 4.4% 9803515 NA +3018 chr4 + 190214555 58501950 58501949 58502026 77 ATTTCTTTTTACTATTATTGCAACTTTGTTATAATATGAAATTTGTAAAAAAGAAAAAGAACAAAAAACAGCAAAAA chr4 + 94230402 23574661 23574660 23574737 23574661 23574660 23574737 77 ATTTTTTGTTGTTCTTGTTGTTTATTTGTTTTGCTCTGTAGTTTTCAAAAAATAAAGGGAAAAACAAACAACAAAAA ....:..x..::.x..:...:xxx......x.:x.x..x.:...x:......x...::...x..x.....:...... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 34927289 NA +3001 chr4 + 190214555 58506333 58506332 58506401 69 TGTATGTGTGTGTGTGTGTGTGTGTGTATGCACATGTATATATAAATATATAAAATTATTTATGTATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ....x:.:.......x...x...x......:.:.........x.x.xx.x:.x..x...x....:.:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -11587809 -82642593 +10191 chr4 + 190214555 58515330 58515329 58515633 304 GAACTTTGT---CATCTGAATGATATTCCTGCCTGACAGCAGGAATTCACATTCCTTGAGGACTTACCTTAAGTAGGACTCATTAGTCCTCTGTAGTCCAGTGCCCCAGCTGCCTATGCTGAAGACAAAAGGGTAGCCAATTTAATTAACCACAGCCTCGAGGAGCATAATTCATTATCAATTTTTCCAAGTAATTTAAGACTGTATCAATGCTCCCAATGAAAGGATAGATGGAGCCAAGTGGTCTAATAAAGAAAGAAATCCCTTAAATCTAATTGCTCTTTTGACTATTTAATTGAAGGTAAAA chr4 + 94230402 48680004 48680003 48680289 48680004 48680003 48680289 286 GATCTTTGTGAGCTCCTGCATGA-----CTGTCTGGCAGCAGGACTTCCTATCCACTAGGAATTTGATTAAAGTAAGACTCATCAATT-TAAACAGTCAAATTCCCCAGCTGCCCATGCTAAAGACAAAAGGGGATCCAATT-AATTAATCACAGCCTGAAGGAGCATAATTAATTATAAGTTTTACCAA--------------TATCAACTTCCTGACTGTAAGAGAGCTTGGAACACAGATGTCTAACCAAGAAAACAGCTCTGTGAATCTGACTGTTTCCCTTGTTCTTTAAGTGATGGTAAGA ..x......---.x:...x....-----...:...:........x...x:..:.x:.::.:.:..:x:.x.....:.......:.:.:-.xx::....x.:.x...........:.....:............x.x......-......:........x:............x.....x.:....x....--------------......:x::.:x.x..x...::x:xx....:.xx..xx......:x......:x.:::.:x.:.....:.:..:.::::.x::.x.....x...x.....:. 9M3I11M5D60M1D53M1D47M14D103M 198/283 70.0% 286/94230402 0.0% 24/283 8.5% 9835326 NA +3175 chr4 + 190214555 58518544 58518543 58518617 74 GTGTGCCTGTGCTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x...:x.:...........::........x.xx.x...x::........::.:..x.xx:..:...:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -17514660 -76715742 +3199 chr4 + 190214555 58525104 58525103 58525165 62 TCTCCTTTTTCTGTTTTACTGTTTTCCAAATATGTATACACACACACACACACACATATACA chr4 + 94230402 32894383 32894382 32894444 32894383 32894382 32894444 62 TCATCTATTGCTGGTTCACTGTTTTTTGGTTAAGAACACACACATACACACACACATATATA ..x:..x..x...x..:........::::x..x.x.:.......:...............:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 25630721 NA +3207 chr4 + 190214555 58534324 58534323 58534397 74 GTGCACCTGTAATCCCAGCTACTTTGGAGACTGAGGCAGGAGAATTGCTTAAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:..........x::..:.....x.xx.x...x::...:.....x.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -17498880 -76731522 +3143 chr4 + 190214555 58538854 58538853 58538889 36 TTGTTGTTGTTGTTGTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 63215016 63215015 63215051 63215016 63215015 63215051 36 TTGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTT ........x........................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -4676162 -89554240 +3006 chr4 + 190214555 58547295 58547294 58547355 61 TGCACTAACACATATCTGAAAAAAAATGATTTGATAAAGAATTTTCTATAAATAAGTGCTT chr4 + 94230402 6760275 6760274 6760335 6760275 6760274 6760335 61 TATATCAAAAAATATTTGGAAAAATATAACTTGATAAGGGATTTGCAATAAATTAGTACTT .::.::..x.x....:..:.....x..:.:.......:.:....x.x......x...:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 51787020 NA +3181 chr4 + 190214555 58550883 58550882 58550932 50 AGGTGACTATTTATAAACCAGGAAGCAGGTGCAGTGTTCATCAGACACCA chr4 + 94230402 67041485 67041484 67041534 67041485 67041484 67041534 50 AGGTGAATTTTTGCAAAACAGGAAGCTGGTGCAGTGCACATCAAACACCA ......x.x...::...x........x.........:x.....:...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -8490602 -85739800 +3080 chr4 + 190214555 58560252 58560251 58560293 42 TTGGAGAATGAATTAAAAAAAAAAAAAAAGAAAAAACTAAAT chr4 + 94230402 5992585 5992584 5992626 5992585 5992584 5992626 42 TCGGAGAATGACTTAAAAAAAAAAAAAAAGGAAAAGGTAAAT .:.........x..................:....:x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 52567667 NA +5396 chr4 + 190214555 58575463 58575462 58575602 140 TAAAACCGAAAATAATTAACTTCTAAAAGTATA-----GAATGGACAGATGACTCCAGGCAAAATTAAAATGATTTGTGCAT-ATATGGAATATTAAATTACTTCATAAAATATTTA-ACCATAATTTGTTTAA--------------------AAAAAGAAAGAAA chr4 + 94230402 48693509 48693508 48693675 48693509 48693508 48693675 167 TAAGGCTGCTAATAATGAACTTCTAAAGGTTCATTTCGACTTGGACAGATGCCTTCAGGCAAAATTAGGCTGATTTGTGCATAATTTAGCATACTAAGTTGCTTTATAAAGTATGCATGTTGTAATTTGTGAAAGGAGATTTTCAAAGTGCTGTAAAAAGAAAGAAA ...::.:.xx......x..........:..x:.-----:xx..........x..:............::x............-..x.:.x...:...:..:...:.....:...x:.-::::........xx..--------------------............. 33M5I44M1I34M1I16M20I13M 107/140 76.4% 167/94230402 0.0% 27/140 19.3% 9881954 NA +3102 chr4 + 190214555 58597097 58597096 58597151 55 GAGAGAGAGGAAAAGAGAGGAAGATAAAAAGAAAAAAAATAGAAAGAGTGAAAAT chr4 + 94230402 39104567 39104566 39104621 39104567 39104566 39104621 55 GAGAAAGAGGAAAAGAGAGGAAGATGAAGGCAAAACAAACACAAAAAGAGTTAAT ....:....................:..::x....x...:.x...:..x.xx... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 19492530 NA +3417 chr4 + 190214555 58603544 58603543 58603624 81 TTCCTTTCTTTTTTTTTTTTTTTTTTTGAGTCAACAATATCTTTTTAATGGCTTAA----TGTGTGCCCAATGTTATAACGCAAA chr4 + 94230402 85567824 85567823 85567908 85567824 85567823 85567908 85 TTTTTTTGTTTGTTTTTTGGTTTTTTTAAGTCAAAAATATCTTTTTAATCTCTCAACCACTTTGTAACCAATGCAGCAATAAAAA ..::...x...x......xx.......:......x..............xx..:..----.x...:x......:x::..::x... 56M4I25M 60/81 74.1% 85/94230402 0.0% 4/81 4.9% -26964280 -67266122 +7892 chr4 + 190214555 58636226 58636225 58636534 309 TCTTCTGCGATGAACAAGTTTCAAACCTGGATACTTACTGCTATAAACTGAAATGAAAATGCATCTTCCTAATATATTAAATTAGTTATAGCTCTGCTGTGAGTCT---GGCAGTCATTCAAAACTTGGCAACAGCAAAGGAGAACCAAGTGGCTTTTATAATGTATTTTTAAGTGAAAGTCATAAAAAAAACTCCATTTCATTAAGTGCTTAAAAAGAGCTTCTTG----AAAACATATTCAGTTCGAGAAGCCCA----------------------GCTCCCAAGTGAGTCCTGTCACTCCACAGTAAGTGAGTTTATTTTCCACGGTGGCTGAG chr4 + 94230402 48704009 48704008 48704340 48704009 48704008 48704340 332 TTTTACACAATGGTAAACTTCCAAACCATTGTGGCTGATACCACATGCTGCTCTGACAA-GTTTCCTCCTACAATATTAAATTAGCTTGAGCACTGTAGTGCTTTGAAAGTCAGTTATTCAAAATCTGGCAGCAGATAAGGAGAATCAAGTGATTTTCCTAATGTA-TTTGAAATTAAAGTCATAAAGAAAAATCTCTTTTATTAAGTGCTTGAAGTGTACTTTTTTTCCCAATGCCAGTTCCTTTAAAAATGTACATGCTGACTGTATAGCAATATATTTTCCTAAGAAAGACCTGTCATATGCTATTAGGTAAATTTGTTTTT----GTAGCTGAG .:..x::.:...:xx..x..:......xxx:.:x:.:x.:.:.:.x:...xxx...x..-.:x..:.....xx............:.xx...x...:x...xx.:x---.x....:........::.....:...xx........:......::...:x.......-...x..:.x...........:....x..:x...:...........:..:x.x:...:..x----..x:.xx:...xx..x:.:.x.:x..----------------------x:...:...x:..x.......:x:xx:.x..:..:.:...:....:----..:...... 59M1D46M3I57M1D60M4I26M22I46M4D9M 201/303 66.3% 332/94230402 0.0% 35/303 11.6% 9932217 NA +11277 chr4 + 190214555 58649285 58649284 58649528 244 ATGGAGAATAAAA-----GCAAATGTACAGAAGTCCACA-GGGAAGGCAAATAGTCAGATAATGGAGTGAGGACAAGGTTGGCA----ATCTTAGCAAAAATGAAACAACAGATGGGGCATAATTTTTGTGAGTTCTCACACAGATGGTTCACCAGATGGATTCTGCCGGGTTCATACAGCTTATGTGTATTTTTCAGCTGCTTATCATGATAGGCAAGGCCACTTCTGTGCAGGCAAAATCTTTCCTTGGTTT chr4 + 94230402 48709154 48709153 48709407 48709154 48709153 48709407 254 ATGAAAAATAAAAATGAGGAGAGAGAGAAGAGGACCACGTGGAAAGACAAGTATTCTGATAATAGAGGGAGGATGGGGCTGGCAGACAAACTTAGTGGCAGTGAAACAACAGATGGGCTATAATTTTAGTGACTCGTCCCACAGATGGTTCAGCAGATGGATTCTGCTGGGTTCATACAACTTAGGTGGAGATCTCAGCTGCTAATCATGACAGGCAGAGCAGCTTCAACAGAGATAGGACCCTTACTTTGCTT ...:.:.......-----.x:.:x.x:x...:.x....:-..:...:...:..x..x......:...x.....:::..:.....----.x.....:::x.:................x:........x....x.:x..x.............x..............:...........:....x...x.xx.:.........x.......:.....::..x:....x:::x..::.::.:.:..x...x.:.. 13M5I21M1I44M4I166M 180/244 73.8% 254/94230402 0.0% 10/244 4.1% 9940131 NA +3098 chr4 + 190214555 58670916 58670915 58670970 55 AAATCAAAACAAAACAAAACAAAACAAAAACACCTACTTTTTTATTTTCCTCCTA chr4 + 94230402 87978604 87978603 87978658 87978604 87978603 87978658 55 AATTGAAAATAAAACAATACAAAACAAAAACAAATATTCTTTTTTATTTCTCCTA ..x.x....:.......x..............xx..:.:....x.x..:...... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -29307688 -64922714 +3339 chr4 + 190214555 58671261 58671260 58671296 36 TTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTGTTTT chr4 + 94230402 5942460 5942459 5942495 5942460 5942459 5942495 36 TTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTGTTTT .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 52728801 NA +3485 chr4 + 190214555 58679363 58679362 58679516 154 AGGGGCTTTTAAAAGTCTAATCTGGTATTTCTTATGAAAAAGTTCTAGAAAAGCCGGTTGAAAACAGTCTATATGTTCAATTACTATTTTTGATGTACTTTATTAAAAAAAATCAGACCAAGTATAATAAAACTAAAGCTTATTTCAAAAATAA chr4 + 94230402 66190214 66190213 66190353 66190214 66190213 66190353 140 AGGAGGTTTCAAGATATCAATATGGCATTTGTCATGT----GGTCTA-AGTATCTGACAGAAGACTAGCTGC---------TGCTAACTCTGGAGTATTTTCTTGAAAGAAACCAGAATAAAAATAATAAACCTGTATCTCATTTCACAGATAA ...:.x...:..:.xx::...x...:....x.:...x----.x....-.:x.x.:.::x...:..x:x..::---------.:...x:.:..:x...:...x..:...:...:....x:..:x........x..:x.x..:......x.:.... 37M4D6M1D24M9D73M 91/140 65.0% 140/94230402 0.0% 14/140 10.0% -7510851 -86719551 +3064 chr4 + 190214555 58689646 58689645 58689719 74 CATATTGTCTTCTCATTTTTGTGTCTTATTCTCTTCTCTTTTCTTTCTTTCCTTTTCTTTCCTTCCTTCCTTCC chr4 + 94230402 78025179 78025178 78025252 78025179 78025178 78025252 74 CATATTTTCTCCTCTTTTTAGAGAGTTCTTTTTTTTTTTTTTCTTTACTGCATTTCTCTTCCTCTCCCCCTCCC ......x...:...x....x.x.xx..x..:.:..:.:........x:.x.x...:::.....::.::...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -19335533 -74894869 +3504 chr4 + 190214555 58689686 58689685 58689763 78 TTCTTTCTTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTGTC--------TCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 + 94230402 11873168 11873167 11873253 11873168 11873167 11873253 86 TTTTGGCTTTCCTTTTCTTTCCCTCTTTTTTTCCTTCCTGTTTCCATTGCAGACAATTTTACCTTCATGTTTTTTTTTTTTTTCCT ..:.xx................:..:..::.........x.:..::.:--------.:..x.:...x.x..:...:...:....:. 48M8I30M 57/78 73.1% 86/94230402 0.0% 8/78 10.3% 46816518 NA +3584 chr4 + 190214555 58730059 58730058 58730130 72 GTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.......:...::........x.xx.x...x.............:..x:xx:.....:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -17303147 -76927255 +10016 chr4 + 190214555 58730426 58730425 58730715 290 GCCTAAAACCTAAAGTTCATATTAATTCAGACAATCT-TTTTCTCATGTAAAATGATACAATCATTCTACCTAGCTCTCATAATGAATA---CAGTAGTTCCAATTAAATCAGAAATGGAGTAAACTTGGAGCTAAATGAATCATAAATCAATAAGTACCTCAGCCTGCTGCCTCATGGTTTATTGATTCAGAAGCTGTTTATCCCACACT----------CATTGTGC-TTGAGTGCAATTATCATTTAATTA--CATTTTCTGTATGTACCAAATTGTATTTTACATGTCTTCCTAGACCAAACA chr4 + 94230402 48725273 48725272 48725572 48725273 48725272 48725572 300 GCCTAACACCAAAAGATATTATCAATGCAGACAGCATGTTTCCTCAGATTAAACCATATAGT--TTCCCTCCTCCTTAAATGAAGCATAATCCAGAAGGCATAATTGCACTAGATGTGGAGTAAACTTGAAGCCAAGCAGGTCATAAATCAATAAATAACTCAGCCTGCAGCCTCATGGTTTATTGATTCACAAGCTGTTTATCCCCCACCTCCCACCATACACTCTACATCAAATGCAATTACTGCTTAATTATCCTTTTTGTGCACGTACAAA-----GACTTAAATACTTCATCAGACCAAGCA ......x...x....x.xx...:...x......::x.-...:....x:.x...:x...:.:.--...:x:.:xx..:xx..:.x.x...---...x..x:x:....:x.::...x:.............:...:..:::::..............:..x..........x.....................x..............x...:----------..:.x.:.-.::.:........::::.......--.x....x..:.:....x..-----:x:...x..:::.:x::.......:.. 37M1I24M2D25M3I119M10I8M1I24M2I19M5D27M 202/283 71.4% 300/94230402 0.0% 24/283 8.5% 10005153 NA +3096 chr4 + 190214555 58741582 58741581 58741651 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -17291615 -76938787 +3926 chr4 + 190214555 58741909 58741908 58741981 73 TGCGCCTGTAGTTCCAGCTACTCGAGAGGCTGAGGCAGGGGAATCGCTTGAAGCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x................:..:........x.xx.x...x.:......x....:..x:.x:..:..:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% -17291296 -76939106 +3063 chr4 + 190214555 58762195 58762194 58762278 84 TATATATATGCATATGTATATATATAAAATATATATATGCATATATAAAATACATATATAAAATATATACATATGTATATATAT chr4 + 94230402 34014330 34014329 34014413 34014330 34014329 34014413 84 TACATATATGTATATGTGACTATATACATCTAATGTATATTTATACAAAACTAATAAAAAAATTAAATACATTTGCATTTTTAT ..:.......:......:xx......x.x:xx..:...::x....:....:xx...x.x...x..x......x..:..x.x... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 24747865 NA +3979 chr4 + 190214555 58764099 58764098 58764164 66 GTGGTGCATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--......:............:........x.xx.x...x...........:.:.. 10M2D54M 54/64 84.4% 64/94230402 0.0% 2/64 3.1% -17269102 -76961300 +6034 chr4 + 190214555 58774467 58774466 58774633 167 GTAGTTCAAACAAAATGAAGGTA--GATGAGTGAGAAACTTGGCAAACATGAGAGAAAAATCTCTTACCTTTCACATATGCAAAACCCATTTGAACCTAATCATTTTAATGCTGACATGAACAGCTGTGCTAGTTCTCATTATTTGATAATGAGGGTTGTGAATATATA chr4 + 94230402 48741171 48741170 48741338 48741171 48741170 48741338 168 GCAGCTGGAACAAAA-GCAGGTACTGGCAAGGACTAGCCTTGATGAGAGTCAGAGAAAATTGTCATGCCTTGCACACACACAGCGCCTATTTGAACTTGATGGCTTTTGTGCTGACAGGAGCAGCTGTGCTCACTCCCCTGATTTGATAATGAGATCTGTAAGTTTGTA .:..:.x:.......-.x.....--.:::..x:xx.:x....:::.:x:.x........x.x..x.:....x....:.::..:x:..:........:.:..x::...x:........x..:..........x::..:.x.x.............:x:...:.:.x.:.. 15M1D7M2I144M 111/166 66.9% 168/94230402 0.0% 3/166 1.8% 10033296 NA +3093 chr4 + 190214555 58782927 58782926 58782998 72 TATACATTTATGTATG--TGTATGTATGTTTATATGTATAACATAGTATATGGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 86234543 86234542 86234616 86234543 86234542 86234616 74 TATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTGT ....:..:...:...:--....x:..::x:.x...x.:..:.xx.:.:...::.........:........... 16M2I56M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% -27451616 -66778786 +3132 chr4 + 190214555 58792774 58792773 58792845 72 AAAAGGAAGAACCAATCCATGCAACAAACTTTGTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTGAAGAAC chr4 + 94230402 59382606 59382605 59382677 59382606 59382605 59382677 72 AAAAGGAAAAACAAAATAAGCAAACAGAATTAAATTTCTGTTCTTTTTTCTTTTTTTTTTTTCCTTTAAAAC ........:...x..x:x.xxx....:.x..x:x.....x.........:............::.xx.:... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -589832 -93640570 +3149 chr4 + 190214555 58801676 58801675 58801749 74 ATTTATATATATTTACATATATTTATATGTATAAATACATATGTGTGTGTGTATATATATATATAGAGAGAGAG chr4 + 94230402 81165007 81165006 81165080 81165007 81165006 81165080 74 ATTAATATAATATAGCATAAAGTAATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAG ...x.....xxx.x:....x.x.x....:..:.....:......:.x:xx:.x.....:......:........ 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -22363331 -71867071 +3156 chr4 + 190214555 58801688 58801687 58801748 61 TTACATATATTTATATGTATAAATACATATGTGTGTGTGTATATATATATATAGAGAGAGA chr4 + 94230402 49681665 49681664 49681722 49681665 49681664 49681722 58 TTGTACACATTT---TATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGA ..::.:.:....---.:........:.....:........:.x.:....x.x......... 12M3D46M 46/58 79.3% 58/94230402 0.0% 3/58 5.2% 9120023 NA +3172 chr4 + 190214555 58801934 58801933 58802016 83 CATGGTGGCAGATGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATTGCTTGAACCTGGGAGGCCGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::x.:.--......:...........::.:......x.xx.x...x::........::.:..x::x:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -17231263 -76999139 +13993 chr4 + 190214555 58826300 58826299 58826734 435 CTTGGTCTTTGCATATCAGTTTTGTAAGAGATATAATCAGACAATATATTAGTGTATTT-TTTGAGGCATTAATATGAGAGCCTGACAGCATTACCTCTAATGTTTATATCACCATAAAATTGGTTTATAGTGATACAATTAGTAATGTTAAACCTAGCTATTATAAGAAGTAGTACTGATTGTTCCACAGTAAATCTCACTTTATAGTGACATAAATGAACAATATTTGTGCCATCATGGTTTATGGCATCAAGTAATCTCA----TGGGAACAAATAACAGTTATCCTGAATGCTCTAATCTTACAGATAAACTATCCATTCATGTTACATTTTAAATCAATATTACTATG---ATTCACATGCT--CTTTTGACTACCTAAAGTTATGAAGG-----TTTATTTTTTAGC---AAAAATATCACAAGTTACATACTTTGAAATATTGTGT chr4 + 94230402 48754281 48754280 48754729 48754281 48754280 48754729 449 CCCAGTATTTGCATATTAGCACCATAAAGGATA--GCCAGATAA-GTATTTGTAGGTTTATTTGCAGCATTAATACCTATGCCCGACAGCATTATTCGTACTGTTTATGCGACCATAAAATAGCTTTATAGAGATACAATTAGTAATGCTGAGCTTAGATAGTATAAATGGTAGTAGTGATTGTACTGCTATAAACTTAACTTTACAGTGACATAAACGAGCAATATTTGTGTCATCATGTTTTATGACATCGCGTAATCTCAGGCCTGAGAGTGTAACGCAAGGGTCCTGCATGCTTTAATTTTGCAGCTAAAATACAATGAAAAAGAACATCCTAATTCATACTTACGATACTCAGCCCTATACTAACTTTCATTCACCTTAAGCTTCAGGGGCATCTTTTCTTCTCTGGCTATAAAATAATTGCAAG-CATTTCATTTCCAATGCTGTGT .:::..x.........:..:x:::...::....--::....:..-:....x..:x:...-....x:.........:xx:x...:..........:::x..x.......::x..........x.x.......x................:.:.:.:...x..x.....:x:......x.......x.::.x:....::.x......:...........:..:...........:.......x......:....:x.........----..:..:::x.xx:..:xx:.....x.....:....:..:...x....x..:xxxxxx.x:xx....::...x...xxx....x..:---.x:.x:..:..--....::x::....x...:.x::::..-----...x..:.:.:..---....xx..::....-:.:x.xx...xx...::..... 33M2D9M1D14M1I203M4I86M3I11M2I26M5I13M3I14M1D22M 295/431 68.4% 449/94230402 0.0% 22/431 5.1% 10072019 NA +12274 chr4 + 190214555 58832921 58832920 58833283 363 CTTCTTCCTTTCTCTCTGTCTCTTTCCC--CCCTTCCCCTTCGCCTTCC-------------CCTTCCCCTTCCCCTTCCCCTTTCCCTTCCCCTTCCCCTTCTCCTTCC--TTCCTTCCTTTCTTCCTTTCTTCCTTCTCTCCTTCCTTTCTCTTTTCTTT---------TTTCTTTTTCTCTTCCTCTCTTTCGTTCTTTCTCTTTATTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCTTTCATTTTCTTT--CTTCTTTATCTCCTTTCCTTTT--CTTTTTCCTTTTGTTTTTCCTTTGCCCTTTCCTTTTTCCTTTCCTCTTTCTTTTTCCCTTTCCTTTCC--TCTCCTCCCTTCCCCTCTCCTCTCC---TCTCCTTTCCTTTTTCCTTTC chr4 + 94230402 1114915 1114914 1115303 1114915 1114914 1115303 389 cctcttcctttctcgcttcccatttcccttctcttcccttTTCTCTTACTATGTTCGCTGGCCCTTTTCCTTCCCTTTCCCTTTCCAATTTCCCTTCAACATCTCCTTACATCTCCTTCCTTTTTCCCCTTA--CCATTTCTcctccctttctcattcccttccctctccctttccttttccctttccccttttc---ttttcctttttttccctttccctatcccatttcccgtccctagcccatttccctttgccccttctcttccctaccttttagcccttcccc----atttccctatcccctttccatttccttcccctatttccctttccccttcccttccattttcccctttccccatttcccttcccattctcctttccccttccctccc .:............x..x:.:x......--.:......:..:x:...x.-------------....::.......:.....:..:.xx..:......xx.x.......x.--:..........:.:..:..x--..x.:......:........x..:.:..---------....:.....:...:.:.::....---:....::...x...::.:.::..x..::x::.:..x...:.xx::.....:.:..--.::...:x::...:.x......--.::..:..:----x...:...x.x........x...:.:.::...x....::......:....:....--.:...:.::.:...x.:...::...---..........::..:...::. 28M2I19M13I48M2I20M2D28M9I24M3D55M2I22M2I9M4D55M2I25M3I21M 249/354 70.3% 389/94230402 0.0% 44/354 12.4% 57718006 NA +3019 chr4 + 190214555 58832982 58832981 58833026 45 TTCCCCTTTCCCTTCCCCTTCCCCTTCTCCTTCCTTCCTTCCTTT chr4 + 94230402 51227414 51227413 51227458 51227414 51227413 51227458 45 TCCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTT .:.:.:........:.....:......:.:......::...:... 45M 35/45 77.8% 45/94230402 0.0% 0/45 0.0% 7605568 NA +3353 chr4 + 190214555 58832986 58832985 58833060 75 CCTTTCCCTTCCCCTTCCCCTTCTCCTTCCTTCCTTCCTTTCTTCCTTTCTTCCTTCTCTCCT-TCCTTTCTCTTT chr4 + 94230402 20999356 20999355 20999431 20999356 20999355 20999431 76 CCTTTCCCTTCAGCTTCCTCTTCTCCATGTTCCTTTTGCTTATTCCTTTTCCATTTCTCTGCTGTCATTTCCCTTT ...........xx.....:.......x.x:.:.:..:x:..x.......:::x:......x..-..x....:.... 63M1I12M 55/75 73.3% 76/94230402 0.0% 1/75 1.3% 37833630 NA +3629 chr4 + 190214555 58833119 58833118 58833230 112 TTTCCTTCCTTCCTTCTTTCATTTTCTTTCTTCTTTATCTCCTTTCCTTTTCTTTTTCCTTTTGTTTTTCC---------------TTTGCCCTTTC--CTTTTTCCTTTCCTCTTTCTTTTTCCCTTT chr4 + 94230402 22331049 22331048 22331175 22331049 22331048 22331175 127 TTTTTTTTCCCTCTTTTTCTATTTTCTTTCTTTTTCATCTCCTCGCCATCTCTCCCTCC--ATGTCCTACCAAAAAAGTTTGGGTAGTTGCACATTAAGTTGTTTTTTTTCCTTTTTCTTTTTCTTTTT ...::..:.:::...:..::............:..:.......:x..x.:...:::...--x...::.x..---------------x....x.x..x--:.x...::......:..........::... 59M2D10M15I11M2I30M 77/110 70.0% 127/94230402 0.0% 19/110 17.3% 36502070 NA +3731 chr4 + 190214555 58833172 58833171 58833289 118 TTTTCCTTTTGTTTTTCCTTTGCCCTTTCCTTTTTCCTTTCCTCTTTCTTTTTCCCTTTCCTTTCCTCTCCTCCCTTCCCCTCTCCTCTCCTCTCCTTTCCTTTTTCCTTTCATATCT chr4 + 94230402 53764506 53764505 53764623 53764506 53764505 53764623 118 TTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCT ....:x.x.......xx:..x.::::xxx....x:::.....:..:..:...:.:......:.:....:x.x...x.::..:..:x::..:::x.....:..:x...:.x....x:.. 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% 5068666 NA +3232 chr4 + 190214555 58835972 58835971 58836089 118 TTTTTTTCTGATACTTTGGGAAACACATAAAACCTCATTTTGTGTGTGTGTGTGCGTGTGTGTATGTATATATATACATGCACATA-TATATATGCACTTGCTTCCT-------AAACTTATATTC chr4 + 94230402 9942644 9942643 9942769 9942644 9942643 9942769 126 TTTTCTTTCACTTCCTTGAGAAATCTGTAGCCACTTGACTGGTAAGTGTGTATGCATGTATAGATATATTTGTATACATGCACATACTGTATTTTTCCTATTTTTTTCAATATGAAGCTTATGTTC ....:..:::x.x.:...:....:x::..:xxx..::x:.x..:x......:...:...:.:x..:...x.:..............-.:...x.x:x..xx:..::.-------..:.....:... 86M1I20M7I12M 75/118 63.6% 126/94230402 0.0% 8/118 6.8% 48893328 NA +3142 chr4 + 190214555 58868080 58868079 58868153 74 ATATGTGTGTATGTATATGTATATATTGTATATGTATATGTATATATGTATATATACACATATTTTAGAAACTA chr4 + 94230402 14793727 14793726 14793800 14793727 14793726 14793800 74 ATATGTGAGTATGCGTATGTATATATATCACACATCTGAGTGTATAACTATAGATATAGATATCTTATCAGCTA .......x.....::...........xx:.:.::.x.:x..:....xx....x...:.x....:...xx.:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 44074353 NA +3121 chr4 + 190214555 58868104 58868103 58868160 57 ATTGTATATGTATATGTATATATGTATATATACACATATTTTAGAAACTAAAAGTTT chr4 + 94230402 83331411 83331410 83331467 83331411 83331410 83331467 57 ATTATGTGTGTATATGTGTATATATATATACACACATAAAATAGAAGCTTTACGTTT ...:.:.:.........:.....:......:.......xxx.....:..xx.x.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -24463307 -69767095 +7204 chr4 + 190214555 58938924 58938923 58939100 177 TTTGTTACATTACTTTGTTTTTTTAATTGTTAGTATATTATGAATAAGTAATGAAATT-CAGCTCATAAGGTTTACATATAAAGTTATTACTCCTAAGTAGGCTAAATTTGCATTTTTTAA--TTATTCAGGTTGCTTACCAATGTAAATGACATTTTAAGTATTAATGATATTGATGTG chr4 + 94230402 48771806 48771805 48771981 48771806 48771805 48771981 176 TCTGTAACTAAATTTTTCTGCTTTGGTTATTACCAC----TTAATAAATAATGAAAATACTTCTCACAATACTTACATGCTATGTTACTGCTTCTAAGGAGTTTCAATTTGCATTTTTTAAAATTATTCTGCTTGTTTACTAATGTAAATGCCTTTTTAAGTATTAATAATATTGACATG .:...x..xxx.:...x:.x:...::..:...x:.:----.x.....:........x.-.xx....:..x::......::x.x....:.:..:.....x..x:.x................--......x.x...:....:..........x.x..............:.......::.. 36M4D18M1I62M2I57M 128/173 74.0% 176/94230402 0.0% 7/173 4.0% 10167118 NA +3049 chr4 + 190214555 58944537 58944536 58944589 53 TGAAAGTGTGTGTGTATGCATATACACACATGTATGCTCAAACACACACACCT chr4 + 94230402 9968345 9968344 9968397 9968345 9968344 9968397 53 TGTGAGTGTGTGTGTATGCATGTGCACACCTTTGTGTTTGCACACACATGCCT ..x:.................:.:.....x.x.:..:.::x.......::... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 48976192 NA +3332 chr4 + 190214555 58984594 58984593 58984675 82 GTGGTGGCACGTGCCAGTAGTCTCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACGTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....::..........::........x.x..x...x.........x::.:..x:xx:..:..:.. 6M1D6M4D65M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -17048607 -77181795 +3220 chr4 + 190214555 58991682 58991681 58991813 132 AATAAAGAAAAAAAGAAAAGAAAGGAAGGAAAGAAAGAAGGGAGAGTGA-GAAAGAAAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGA--------AGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAA-AGAAGGAAAGAA chr4 + 94230402 69368735 69368734 69368867 69368735 69368734 69368867 133 AATGAAGAAAAAGAGAAAAGAGAGGAAAG---------GGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATGGTTTGTACCAGGGCCAGTGGCATAACGAAAGCAAAAGAGAACAGATTAAAAGAA ...:........:........:.....:.---------:......:..:-.:.:.:.....::..:x:.x.x.:...x::.:.:....:--------...:xx::x.:x.x..x.....x..:.:....-...xx:...... 29M9D11M1I39M8I32M1I12M 83/123 67.5% 133/94230402 0.0% 19/123 15.4% -10377053 -83853349 +3023 chr4 + 190214555 58991737 58991736 58991810 74 AAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAA chr4 + 94230402 86730449 86730448 86730522 86730449 86730448 86730522 74 AAGACGAAAGAAAAAAAAGGAGGCAGGTTAAGAGCAAATGAAGAAAAGGAGAGCAAAGGAGAAAAAGCAGGAAA ....x........:.:.....:.x.::xx.x..:x:..x.......::::..:x:..:..:.:....x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -27738712 -66491690 +3674 chr4 + 190214555 58991883 58991882 58992013 131 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGCAATAAAGAAAAAAGAAAAGAAAGAAAG------GCAATAAAGAAAAAATAAAAGAAAGGAAGGAAAGAAAGAAGGGAGAGTGAGAAAGAAGAAAAGAAAGA chr4 + 94230402 11407757 11407756 11407889 11407757 11407756 11407889 133 AGAGAGCATAAAAAAATCAAAGAGTGAAAAACAAACAAACAAAACAAAACAAACAAAAAACAGCCCCAAACCCCAAAAGCAAAACAAGAATAAGGAAGGAAAGTAAG----GAGAGTGGGGCTGAAGAGAACCAAAA ...:..x.x:...:..xx.....:x....:.x.::...xx..:.x....x...x:...:.x..------:.xx:...::x....:..:.:x............x...----.......:.:xx.....:..xx..:. 63M6I38M4D26M 85/127 66.9% 133/94230402 0.0% 10/127 7.9% 47584126 NA +3027 chr4 + 190214555 58992062 58992061 58992133 72 TGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAT chr4 + 94230402 41112175 41112174 41112246 41112175 41112174 41112246 72 TGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAAT ..x.....:.:..:...x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 17879887 NA +3580 chr4 + 190214555 58992065 58992064 58992164 100 AGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATTCAAATAGGAAAAGAGAAAGTCAAGGTATCC chr4 + 94230402 84536568 84536567 84536667 84536568 84536567 84536667 100 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTC .:.::::.:....:...:...:x..x...:.x..:...x:.::..:....::.:.::..:..:.....x...x:...x....xx::x...::.:....:. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% -25544503 -68685899 +3676 chr4 + 190214555 59006777 59006776 59006861 85 TACATAGTGGCACGTACCTGTACTTCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCTCTTGAGTCCAGAAGTTTGTGATTACAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....::.--..x....x.............::........x.xx.x.:.x.x.....::.......:..xx.::.::.. 13M2D70M 60/83 72.3% 83/94230402 0.0% 2/83 2.4% -17026418 -77203984 +3111 chr4 + 190214555 59016669 59016668 59016766 98 TTTAGAAGTTGTTTTTGTTTGTTTGTTTGTTTTTTCCTGCGGCACTTTAAATATTTCATGCCACTCTCT----CCTGACCTGTAAGGTTTCTACTGAAAAGT chr4 + 94230402 48643529 48643528 48643630 48643529 48643528 48643630 102 TTTGGGTGTTTTTTTTGTTTGTTTGTTTGTTTTTTGCTGTGATTTGCTAACTCTTCTGTTTCATCCTCCTTCACATGAACTTCAAATCTTTCACTTTATAGT ...:.:x...x........................x...:.::x:x:...x.x..:::.x:..::...:----.x...x..x:..:x:..::...xx.x... 69M4I29M 64/98 65.3% 102/94230402 0.0% 4/98 4.1% 10373140 NA +3384 chr4 + 190214555 59030473 59030472 59030533 61 GTGTGTGTATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATG chr4 + 94230402 86633931 86633930 86633991 86633931 86633930 86633991 61 GCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:...:...x....:...x......::..:..........:::.x...:..:..x.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -27603458 -66626944 +3041 chr4 + 190214555 59030474 59030473 59030518 45 TGTGTGTATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGT chr4 + 94230402 65759992 65759991 65760036 65759992 65759991 65760036 45 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ....x...............:...::...x........::.:... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -6729518 -87500884 +3347 chr4 + 190214555 59030474 59030473 59030548 75 TGTGTGTATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATGTACATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.:...:.........:...xx:...:x.:...::.:...:x:.::..:.x....:...:...:.:.:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -26804067 -67426335 +3140 chr4 + 190214555 59030478 59030477 59030539 62 TGTATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATGTACATA chr4 + 94230402 27325502 27325501 27325563 27325502 27325501 27325563 62 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .....::.:x..x::x..x..:.........:...........::...:.......x.x.:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 31704976 NA +3129 chr4 + 190214555 59030481 59030480 59030546 66 ATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATGTACATATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...::.:..xx......:::x..x::x..x..:.............:.:.:.....:..:...... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 31704990 NA +3028 chr4 + 190214555 59048338 59048337 59048401 64 GTTTTATTTTATCTTATTATTATTATTATTATTATTTTGAGACAGAGTCTCACTCTGTTGCCCA chr4 + 94230402 83377783 83377782 83377846 83377783 83377782 83377846 64 GTTTTGTTTTGTTTTTGTATTATTATTGTTATTATTTTAAAAGCTAGACTTTCTTTTTTTCCCA .....:....:.:..xx..........:..........:.:.xxx..x..:x..:.x..x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -24329445 -69900957 +3541 chr4 + 190214555 59075065 59075064 59075152 88 GTGTGTGTGTGTGTGTATATACATACATATATATATATATACTTTATTCTTACAGTAAAGTAGGCTAGAGTAAAGAAAAAATAAGAAA chr4 + 94230402 6083173 6083172 6083239 6083173 6083172 6083239 67 GTGTGTGTGTGTGCGCATACACAAACATATATATATA-------TATTCTTACAT--------------GTAAAAAAAAAAAAAAAAA .............:.:...:...x.............-------..........x--------------.....:......x..:... 37M7D11M14D19M 59/67 88.1% 67/94230402 0.0% 21/67 31.3% 52991892 NA +3188 chr4 + 190214555 59077043 59077042 59077156 114 TGACAGAGCCAGACTCTGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGA--------AAATACATAGCAAAGTGATTTATTTAA---AATGAAC chr4 + 94230402 78266948 78266947 78267070 78266948 78266947 78267070 123 TGACAGAGATAAA-TCAGCCTA-AGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAAC ........x:.:.-..x.:..x-.:....x...:.xx...........xx....:::......:.......:.....:x.--------.:...x:..xx...:::.:.x.x....---...:... 13M1D8M1D57M8I27M3I7M 80/112 71.4% 123/94230402 0.0% 13/112 11.6% -19189905 -75040497 +3017 chr4 + 190214555 59088888 59088887 59088943 56 TCCTTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCTCCTCCTCCTTCCCCTC chr4 + 94230402 58890516 58890515 58890571 58890516 58890515 58890571 56 TCTTTTTTTCTCTTCCTCCCTTTCCCCCTCCTCCTCTCCACCACTTTGCTCACCTC ..:..::.:...:.......::...:..........:..x..x.:.:x:..x.... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 198372 NA +3175 chr4 + 190214555 59094474 59094473 59094529 56 TTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTT chr4 + 94230402 86518998 86518997 86519053 86518998 86518997 86519053 56 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTT ..:...::.::..:....x:..:xx......:...........:.....:...... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -27424524 -66805878 +3101 chr4 + 190214555 59094484 59094483 59094537 54 TCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGTTTTGTT chr4 + 94230402 54623004 54623003 54623057 54623004 54623003 54623057 54 TCCTCTTTACTTTTTTTTTTTTTAACTTTTTTTTTTGTTTTGCTTTGGTTGGTT ..:.::..x....:.........xx:..........x..........x..x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 4471480 NA +3054 chr4 + 190214555 59094490 59094489 59094550 61 TTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGTTTTGTTTTAAATAGATCAC chr4 + 94230402 89528948 89528947 89529008 89528948 89528947 89529008 61 TTTCTTCCTCTTCTGCTTTTCTGTTTTCTTTTTCTGTTTTGTTTATTTTTATATATAGCGC ......:..:..:.x:....:.x....:.....:..:.......xx.....x...x.x.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -30434458 -63795944 +3967 chr4 + 190214555 59162351 59162350 59162521 171 AAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAA-------AGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAG chr4 + 94230402 49044652 49044651 49044821 49044652 49044651 49044821 170 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAG--AATGAAG------CAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG ......xx.:.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x:.....x.-------......::.:...xx..:...:...:.:.::x:...:.x:.......:.....--..::...------x.....:.x:...xx:.:....::.:..:x:..x..x... 63M7I53M2D7M6D40M 102/163 62.6% 170/94230402 0.0% 15/163 9.2% 10117699 NA +3079 chr4 + 190214555 59162385 59162384 59162459 75 AAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAA chr4 + 94230402 66803520 66803519 66803594 66803520 66803519 66803594 75 AGATAAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAAA .:.x....x.:::..::..:...:.....::.:.:.........:x:.x...x..:..:....x..:.x.x.:.. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -7641135 -86589267 +3103 chr4 + 190214555 59162413 59162412 59162461 49 AAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAG chr4 + 94230402 44840876 44840875 44840924 44840876 44840875 44840924 49 AGAAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAAAAAAAG .::....:::..:...::..........:...:...:.......:.... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 14321537 NA +3434 chr4 + 190214555 59162429 59162428 59162572 144 AAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAA-----GAAAGAAGGAAAGAA------------------------------AGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAA chr4 + 94230402 25190329 25190328 25190507 25190329 25190328 25190507 179 AAGCAAAGATGAGAGAGAAAAGAAAAAAATCAAATGTGGTAGAGAAGAAATGTAAGAGAGAATAGACAGAGATGAGAGGTATAAAACAGTAGAAAAAGGAGAGAAGAATCTCTCTTTTTTTGATGTTTCTTGATTAGGAGGTGAAAATTAAAGTAAGGAAATAGAAGAGTGGGAGagaa ...x..:..x:...:.............:xx.::x:x..x.:x:......x.x....:..x.x...x..::.x..:...x.x...-----::..:.....:....------------------------------..:.::x..:..xx....x...:...x.:....:x:.:.::... 85M5I15M30I44M 94/144 65.3% 179/94230402 0.0% 35/144 24.3% 33972100 NA +3423 chr4 + 190214555 59162453 59162452 59162567 115 AAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 9464440 9464439 9464554 9464440 9464439 9464554 115 AACAGAAAGAAAAGGCAGCAAACGATAAAAAGGAAGACAAAAAGGCAGCAACAAAAGGGAAGAAAGGAGCCAAAGGCAAAGACGAAACTAAACAAGAGGATGCAAAAGAAGAAAA ..x......:.....x.:....x:.x::....:...xx..:..:.x.:x:.x.::.:.:.......:..xx..:::x:..:.x..:.xx:..x:.:..:.x:x.......:.:.. 115M 69/115 60.0% 115/94230402 0.0% 0/115 0.0% 49698013 NA +4770 chr4 + 190214555 59162456 59162455 59162643 188 AGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGG-AAAGAAAGGAAGAAAGAA---AGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAG-----GAAAGGAAACAAAGAAAGAAAAGAAAGGAAAGAAGGCAAGAAAGAAAGGAAGAAAGAAAGAAAGAA chr4 + 94230402 65771127 65771126 65771321 65771127 65771126 65771321 195 AAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAA--CAAGCAAGGAGTACAGAAAGCAATAATAAA .:.....x.::.:....::.x..:x.....x..x..x:xx...-.::.xx..x......x.x---.....:xx::::.:..........x:.....:.......x.x.:...xx.:......:...-----..:x.:.....:.x:xx:::.:...:...:....--....x...:.:x:x......x..x..x:.. 43M1I18M3I61M5I34M2D30M 121/186 65.1% 195/94230402 0.0% 11/186 5.9% -6608671 -87621731 +3938 chr4 + 190214555 59162464 59162463 59162586 123 AAGGAAACA--AAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAGGAAAGGAAA chr4 + 94230402 24042726 24042725 24042850 24042726 24042725 24042850 125 AAGGAAACATTAGGCAACAGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAA .........--.:.x..x::x..:.:xx.....:x::..:x.:x::......:..:.x..:...x..:..........x.:.x.....xx.x.x...x:x.x.....x:..x.........x... 9M2I114M 82/123 66.7% 125/94230402 0.0% 2/123 1.6% 35119738 NA +3102 chr4 + 190214555 59162500 59162499 59162573 74 AAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAA chr4 + 94230402 71601026 71601025 71601099 71601026 71601025 71601099 74 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAA .:...::..:...:...:x..:...x:..x...x..:...:.:x:.:x.x...x.x:.............:... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -12438526 -81791876 +3057 chr4 + 190214555 59162568 59162567 59162625 58 AGGAAAAAAGGAAAGGAAACAAAGAAAGAAAAGAAAGGAAAGAAGGCAAGAAAGAAAG chr4 + 94230402 78905706 78905705 78905763 78905706 78905705 78905763 58 AGGAAAAAAAGAAAGGAAGCAAACAGAAAACAGTAAGAAAGTAACTCAGGAAAGATAG .........:........:....x.:.:..x..x...:..:x..xx..:......x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -19743138 -74487264 +3368 chr4 + 190214555 59188864 59188863 59188979 116 TTCCCTTCCTTTCTACCTCTCTCTTTGCTTTTTTCTTTCTTTCTTTTTCTTTC------TTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGTCTT chr4 + 94230402 83326934 83326933 83327055 83326934 83326933 83327055 122 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCTGAAACTCAGTCCTCACCTCTGCGTTTT ....:..x:.:x.:.:..:.x.....x:xx::::..........:....x...------x.....x:x.......x..:...:.:.:........xxxx...xx..:.:x::...x:..:.. 53M6I63M 74/116 63.8% 122/94230402 0.0% 6/116 5.2% -24138070 -70092332 +4787 chr4 + 190214555 59188908 59188907 59189044 137 TTTTCTTTCTTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTT------------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:x..x:...::..::.......x..:x:..x:.:..x.x:.x.:::..::x....:...x...x..:..x::.............:------------.::x:......x::.:...::..........:.:.x..... 96M12I41M 90/137 65.7% 149/94230402 0.0% 12/137 8.8% 9012642 NA +3684 chr4 + 190214555 59188910 59188909 59189013 104 TTCTTTCTTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCT----------------TTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x......x...:..:.x.:...::x.:.x....:.----------------.:.......::..:....:.......xxx.:.::.:.x.:x.....:...:x......::. 43M16I61M 71/104 68.3% 120/94230402 0.0% 16/104 15.4% -23787721 -70442681 +3322 chr4 + 190214555 59188917 59188916 59189017 101 TTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 93060601 93060600 93060701 93060601 93060600 93060701 101 TCTCTTTTCTATTGCTTCCCTCTGGCTACCTTTTCTTGTTTTACCCCTTCCTTCCTCATGGATCTGAGTCCCCTTTTTCTTCCTTTTCTGCCTTTTTTTCT .:........x..x...:...:.xx..x:.:......x:.:.x:.:...:...:...xxxxx...xxx.::.:..:..::.:::.....x:....:..... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% -33871684 -60358718 +4065 chr4 + 190214555 59188918 59188917 59189131 214 TTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----------CTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTTCTTCTTTTTTGACAGAAGAAAAAAAGTCTTCTTTTTCTCTCTCTCTCCCAG chr4 + 94230402 7632362 7632361 7632557 7632362 7632361 7632557 196 TCCCTTTCATGTCCTTCCCTTCATCCCTACTGTCTCATTCCTTTTATTAATTGCTCTGCTTTTTTTCCTTCTGCCTT------TTCCTGCCTTTCTTTTTCTGCAGAAGTAAAACTTCTACTCTACTAATTCATTTTTGCTCAATCATT-------------TTTCTTTTCTTCATTGTCTCTTGAC-----CATATAAGTCTCCTTT-----CCTCTACCCCAG .:.:....x.x.:...:....:x..::.x..x...:x:..::.:.x..xx..x.....::..:....:....x:...------..:..x:........:.:.-----------x:....x:::.x..xx...x..:..x...xx..x..-------------...:.......:x..x.:.:.....-----x.x.x......:....-----:....x:..... 77M6D19M11I36M13D25M5D16M5D12M 124/185 67.0% 196/94230402 0.0% 40/185 21.6% 51556556 NA +3050 chr4 + 190214555 59188922 59188921 59188976 55 TTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGT chr4 + 94230402 78525822 78525821 78525876 78525822 78525821 78525876 55 TTTCTGTGTTTTTCCCTCTTCTTTCATATTTTTTGCTCTCTATTTCTTTCACTGT .....x.x.:.....:.:.......x.x.:...:x......x........x.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -19336900 -74893502 +3059 chr4 + 190214555 59188922 59188921 59188976 55 TTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGT chr4 + 94230402 78530129 78530128 78530183 78530129 78530128 78530183 55 TTTCTGTGTTTTTCCCTCTTCTTTCATATTTTTCGCTCTCTATTTCTTCCACTGT .....x.x.:.....:.:.......x.x.:....x......x......:.x.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -19341207 -74889195 +3455 chr4 + 190214555 59188936 59188935 59189021 86 CTTTTTCTTTCCTT-TCTTTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTC---CTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..........:...-..::.x..---...:....::..:..x..x..x.:.........:...::...x.....x..xx:.x..... 14M1I8M3D61M 62/83 74.7% 84/94230402 0.0% 4/83 4.8% 1816910 NA +3263 chr4 + 190214555 59188947 59188946 59189065 119 CTTTCTTTCTCTCTCTCT---TTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCT---TTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:.....::.::---.x:.......---..:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.......:..::::::..........:.:..:. 18M3I10M3D88M 73/116 62.9% 119/94230402 0.0% 6/116 5.2% -4508170 -89722232 +4049 chr4 + 190214555 59188951 59188950 59189073 123 CTTTCTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.::.....:..:::xx.x.x.::.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx.......:..:.:.::........:.:...::.x... 123M 76/123 61.8% 123/94230402 0.0% 0/123 0.0% -4508166 -89722236 +4388 chr4 + 190214555 59188955 59188954 59189076 122 CTCTCTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ..:.x.::..:..:..::.x..x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.:.:x.xx.........::.:.::....:............x.. 122M 77/122 63.1% 122/94230402 0.0% 0/122 0.0% -4508162 -89722240 +3474 chr4 + 190214555 59188959 59188958 59189080 122 CTCTCTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ..:.x..:..:..::.x:.xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....:.:x.xx...:.:...::.:.:::.....:...::....:x.. 122M 71/122 58.2% 122/94230402 0.0% 0/122 0.0% -4508158 -89722244 +4095 chr4 + 190214555 59188963 59188962 59189102 140 CTTTCTTTCTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTTCTTCTTTTTTGACAGAAGAAAA chr4 + 94230402 63697117 63697116 63697249 63697117 63697116 63697249 133 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT---CTCCCCTCTTTTCTTTCTTCCTTTTTATTTA--AGAAGAAAA ....x..:....x::...:xx:x..:.:.....:....:.:x..::.:.x....xx....--.x....xxx.:..:x:.:....x.xx.......---..:.:::.....:......:...:..x...:--......... 60M2D33M3D31M2D9M 90/133 67.7% 133/94230402 0.0% 7/133 5.3% -4508154 -89722248 +3927 chr4 + 190214555 59188971 59188970 59189106 136 CTCTGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTTCTTCTTTTTTGACAGAAGAAAAAAAG chr4 + 94230402 63697117 63697116 63697250 63697117 63697116 63697250 134 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTT-TCTTTCTTCCTTTTT-ATTTAAGAAGAAAAG ..:.:.:::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx:::..x..:....x:xx.:.:::...:..:.:...-.........:.....-.:xx.....:..... 104M1D15M1D15M 84/134 62.7% 134/94230402 0.0% 2/134 1.5% -4508146 -89722256 +3368 chr4 + 190214555 59244831 59244830 59244885 55 GCAAAAACAAAAAAAAAAAAACAAAAATAAAACAACAGCAACAACAACAAAAAAA chr4 + 94230402 49372032 49372031 49372086 49372032 49372031 49372086 55 GCACAAGTCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAA ...x..::x.......x...xx.....:..x.........:.............. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 9872799 NA +3075 chr4 + 190214555 59244839 59244838 59244884 46 AAAAAAAAAAAAACAAAAATAAAACAACAGCAACAACAACAAAAAA chr4 + 94230402 28772148 28772147 28772193 28772148 28772147 28772193 46 AAAAATAAATTGACTAAACTAAAACAACAGCAACAACAACAAAAAA .....x...xx:..x...x........................... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 30472691 NA +3236 chr4 + 190214555 59244885 59244884 59244958 74 ACCTTAACAGAGCTCATGCTAAATGTACTTACCACAATTAAAAAAAAAAAAAAAAGAAAAAGAAAAGAATCTTG chr4 + 94230402 17362741 17362740 17362814 17362741 17362740 17362814 74 ACTTTTAGAGATTTCAAGGAAAATGTACTTGAAACAGTTAAAAAACAAAAAACAACATAAAGGAGAGAAACCTG ..:..x.x...x:...x.xx..........:xx...:........x......x..x.x....:.:....x.:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 41882144 NA +3023 chr4 + 190214555 59264892 59264891 59264947 56 TATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGAGAGAGAGAGA chr4 + 94230402 87420505 87420504 87420560 87420505 87420504 87420560 56 TAGTTATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGA ..x:.:...........:.:........:.x:x.x.....::xx............ 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -28155613 -66074789 +3151 chr4 + 190214555 59264896 59264895 59264945 50 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGAGAGAGAGA chr4 + 94230402 87420511 87420510 87420560 87420511 87420510 87420560 50 TGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGA ...........:.:........:.x:x.x.....:.:x............ 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -28155615 -66074787 +15089 chr4 + 190214555 59317050 59317049 59317535 486 ATCCTCTATTGAGTGCTGATGACAAGCCATGA-GAAGCTCTAGGGAAATTATTGCAGGTGGTGGCTCTGGCAAGGGAAAGGAGCATTGCTCCTAAATAGTGGACTGATCCTGATTGCATGCCTTGTATTAGATGATCCCCAGTCTCAGCAGGATTTTCAAAAGAGATTATTGACTTACTGCCCCAATGTCTCAAGCCAACAACCTGTAAATCATATGACAGAGACCATGGGAAGCTTATTTCTTTGGAC--------AGAAAAAGAATTCAGATTCC-CTCAAAGAAGATTAAAACTCCAATTATTGATTT-TTGAGATAGCCAAAATTAATAGAAGTTTCTCACCTTCTATTCAGTCAAAACTCAAGAGACATCAGCTGCTG--AAAATTTTCCTACTTCTAAAATTCTAACTGTAG-AACAAAACATGTT------ATTTTTTACT-CCAAAAGTTAAACCCATGTTTG--TTTTTATTAATTTGATTTTGTTCATTATGATTTATA chr4 + 94230402 48869937 48869936 48870432 48869937 48869936 48870432 496 ATCCTCTTGGGCATTTCAATGACAAGGCTTCACAAAACTCTTGGGAAATTATTTCAGTGGGTGTTCCCATACAAAGTAGAGAATATAGCTTCTCAACAGCAGATTGACTCTGATTGCACATCTCATGCTAGACAATCTTAACTCTCAGCAGGATTTTCAA---AGAATATTGACTTACTGTCCCCGAGTCTCAAACCAACAACCTGTAAATCATATGACAGAGTACAAGGGACATTTATTTCTGAGGCCGGACTGGGAGATAAAGAATAAAGATGCCTCTAAAAAAAGATTGAAACTCAAATCATTGATTTCTTGAGA----CGGAATTAATAAACTTTTCTCAACCTCTA--CAGTTAAATCTT---AGATTTCTG-TGCTGCAAAAACTTTTCTGCTAGTTAAAAATTAAATATAATACCAAGAAATCCTTAAGGAAGTTTCTATTACTACATTTTAAACTCATATCCAACTTTTTATGGCTTTTTGCTTTTTAATTCTTTTCTGTA .......xxx.x:.x:::........x.x.x.-:..:....x...........x...xx....x::.::xxx.::.x.::..::..x...:..x..:..::..:...::.........:::..::.::....::...::x.x..................---...x.............:...x:x.......:............................xx..x....x::........xx..x.--------...x.......xx....x..-..x...:......:......x...:........-......----.::........:.xx.......x.:....--....:...x..:---...:x..x.-.....--....:...:..:..xx.x...xx:...x.:..:-.x...:.x..x:.------.x...:..:.-.:.x.xx......:...:.:::--.......x:x...xxx:..x..x...x.xx.:.:.. 32M1I127M3D86M8I20M1I33M1I6M4D29M2D12M3D9M1D5M2I33M1I13M6I10M1I22M2I36M 338/473 71.5% 496/94230402 0.0% 36/473 7.6% 10447113 NA +3409 chr4 + 190214555 59323391 59323390 59323486 96 AAAGCAATATTGATTTTTTTGGGAAATATTTATGAAAAAGGAACACAGAAATGCAGAAGAAA--AACTACTTTTTAAATGGAATGTATTTTATACTAC chr4 + 94230402 57734373 57734372 57734470 57734373 57734372 57734470 98 AGAGCAAAATTCATTTTTCTGAGAAACATCCATGGAAGAGGAACAGAGAAGAGCAGTAAACGCTACCAACTTTCTACAAGAAAGGATGCTTGCACCAC .:.....x...x......:..:....:..::...:..:.......x....:x....x.:.x:--.x.x.....:..x.x.:..x.xxx:..::..:.. 62M2I34M 65/96 67.7% 98/94230402 0.0% 2/96 2.1% 1589018 NA +3173 chr4 + 190214555 59325692 59325691 59325744 53 TTCACTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACCAAGT chr4 + 94230402 53038393 53038392 53038445 53038393 53038392 53038445 53 TTTGCTTTCCTTCTCTCTTTTTTTTTTTTTTCTCCTGTTTGACAAGACCAAGT ..::.....:....:................:.::.x...xx::......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 6287299 NA +3118 chr4 + 190214555 59335046 59335045 59335114 69 CGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .:.:....:--..:.x......:...........::........x.xx.x...xx:.x.........:. 9M2D58M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% -16698151 -77532251 +11786 chr4 + 190214555 59352573 59352572 59352942 370 GTATATGTGGAATTTGTGGTGGCCAAGGCTTTTTACTTATTTGTGTGTGTGTGTCTTTGTTAACTAAGTTAGACTACAGAATGATCCATTTTTGGATCATCAGAAATGAATGCT-ATGTGTCAAAACTTGATTGGGTCCTGCAGTTGAGGGAAAGG--AAAAAAATCAGTGATAAGCTGCTAAAGTTATTACCTT--AGAAAGTCAATTATCTGCTGTGAGGTAACAACAGTGAACAATTTTCTGGAAATATGAGAGAGAA-CAGCAGTAAGAAAAGATTAACAAAGCAGTTAGCACAGTATTGATTAGGCCTCCAACTAGCAAATTTAAGCCTGGATCTTGCTAAAAAGGAGAAAAAGTCAACT-TACCCAAATAA chr4 + 94230402 48883204 48883203 48883548 48883204 48883203 48883548 345 GCATATCTGGTAGTTGTACTGGCTGTGGCTTTTTGC--ATTAGGCTGCA---------GTTCATACAGTCA--------------CTGCTTTAGAGTAATCAGAAAGCAGCTCTGATCTACCAGACCATAATAGGGACCTGCACTACAGGGGTATGTGGGAAATATCACTGATAAGCTGCTACAGTTATTACCTAGAAAAAAATCAATTATCTGCTCTGAGGTAACAACAGT-------CTCCTGGATAGATGGGAGAGAAATAGCAGCAAAAGAGGATTAATGGAGCAGTTAGTATGGTATTGATTAGGCCTCTGGCTTGTGGGGCTCAGTCTGGAACTGACTATGAAGAAGCAAAACTCAGCTCTACCCAAATAA .:....x...x.x....:x....::x........:.--...x.xx..::---------...x.:xx...:.--------------.:::...x.::.x........xx.::x..-..x.::..:.x.x.:..x...x......x.xx....:x.x.--::...x....x.............x...........x--.:...:.............x...............-------:.:.....x.x...:.......-:.....:..:.:.:......:::.........:.::................:::..x.::::x:.x..:.....x..x:...x:...:..x....x...:..-........... 36M2D11M9D13M14D29M1I41M2I37M2I35M7D22M1I103M1I11M 245/338 72.5% 345/94230402 0.0% 39/338 11.5% 10469369 NA +3189 chr4 + 190214555 59370505 59370504 59370569 65 TTGGCACTGACAGTAATAAAATGAGAAGCCTGCTGGTCAATAAAGCTCTATAATATTTTGTTTAT chr4 + 94230402 81277801 81277800 81277865 81277801 81277800 81277865 65 TTCACACTGGCAGAAGTAAAAACAGAAGACTGCTTGTCAGTAAAGCTCTGTATTACCCTGGTGAT ..x:.....:...x.:.....xx.....x.....x....:.........:..x..:::..x.x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -21907296 -72323106 +3046 chr4 + 190214555 59373146 59373145 59373198 53 AGAACAATTTCTCTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 59146411 59146410 59146463 59146411 59146410 59146463 53 AAAACTATTCTTCCCGTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTTGTATT .:...x...::..::x..x.......................xx......x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 226735 NA +3095 chr4 + 190214555 59373153 59373152 59373196 44 TTTCTCTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTT chr4 + 94230402 77840996 77840995 77841039 77840996 77840995 77841039 44 TTTTTTCTTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTT ...:.::....x................x...x........... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -18467843 -75762559 +3030 chr4 + 190214555 59373155 59373154 59373193 39 TCTCTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTT chr4 + 94230402 76208472 76208471 76208510 76208472 76208471 76208510 39 TTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTT .:.:.............................:x.... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -16835317 -77395085 +32900 chr4 + 190214555 59387846 59387845 59388679 834 GTATGTGTTACACTTTGAAAGTAATGAAAGAAAAAGCATATTTGGAGGAGTATGATAGTAGCTTTGCTTTGTACTGAGCAGTAGGAACCCTAACTACTGCACATG------CCTGTAAATCATCAAGTTACAGTAACAGGATCTGGCAGGGGGGTAGAATGAACTATTTGCATTAAAAATCTGTCAAGTTAAAAATGCAATAAAAACAA---AAAAATCAATAATAATACATTTAAATTCAAACAGTCATCACAGCACTGCACTAGCAATCAGTCATATTTACCACGGCCACGTATGTAATAATCCTCTTGATCCATCTATAATTACTTGCTTTGCCTCTTGAATTATCAACAGCTCTTATGGCTTATTGCCTTGTACTTGCTTAATAAGCATTTGCAATCAATAATCTTGCCACAGAGTAAGAAGCAACCAGCCAGCCAAGCCCAGGGTTTAAATGCCTCACAAGTTATCGTTACATCGGTGTGAACGACAAAGAGGTGGCTGTGCTAATGGGAGAGGCATGCAGTAAAAAGGTAATTTAGAAAATCTGCTTACTGCAATGTGTGG--ATCTTACCATGGT--TGGTGGTGTCTCAGCTATGGGGAACAGTCACCCTTGAAAACACATCTTCAAATCCTTCCCAGAGGTGCTTTTACAGTGATCATCATCTCCAGCAGCTGTC--TTCTATATCTTCCTATCAACATAACACATCCAGTTTGCCTGAAGTGCTTTTTGCCTGA-CTGGAAAAGCAAACAGTTATTTTCTTCATTCCATGGTATATA---ATGGAGAACAGAAATTTATATGCAAATTTGAGTATTAGTGACACTTTGATGAGAAGAGTTTAA chr4 + 94230402 48891159 48891158 48891969 48891159 48891158 48891969 811 GTATGTG----ATTTTTAATCTCATTCAAAAAGTAGCA-ATAGAGTGGAAAATAATAAAAGCCT------GTACCAAGAGATGAAAA-------TATTGTACAGAGAGAGATTCATAAATCAGTAAACTACAGCAGCATATTCTACCTCCAGAGTAAAATAGGCTGTTTGCATTAAAAAGATGT-AGATTTAAAATGTGATAAAAACAACAAAAAAATCAATAATGATACATTTTAATTCAAACAGTCATCACAGCACTGCCACAGCAACCAGTCATATTTACCCATGTCCTGTATATAATAATCCCCTTGATCCCTATGTAATTGCCAGCTTCACCTCTTGAATTATCAACAGCCCTCATGGCTTATTGCTTCGTATTTTCTTAATAAGTGCCTGCAATCAATAATCTTGCCACTGAGTAAGCAGCAACCAGCCAGCCAAACACAGGGTGTAAATGTTTCAGAAGTGATCATTACAGGGATACAAATGACA---AGGTGACTGTGCTAATGGGATAGGCATGGAGTAAAGATATAATTTTGGAAATCTGCTAACTGGAACATGTAGACACTTTGCCACGGCAAAAATGATCTTTCCACAAAGGGGAATATTTATCCTCAAAAAAGAAACCTCAAATCCTCCCAAAAGACAGTTTT----TTTTTCCCCTCTGAGATAGCAATCAACACTATATCTCAACATCAGCACAAAGCATTCAGTGCGCCTGCAGC-CTACTTATTTGATCTGGAAATGCAG---------TTGCTCATTCC------TATAAGGATGGATAACATGGATTTACATGCAAATTTGAGAATTAGTGTCACTTTGATGACAATGGTTTAA .......----.:...x..xx.x..xx..:..:x....-..xx:.x...:x..:...:x...:.------....::..x::.:::..-------..:..:...x:------::::.......x:..::.....:.:..x:x...:x.xxx:.:...:...:::..:.............xx...-.::..x......::..........---.............:........x..........................xx:.....:..............xxx.:.x:....:.........:........x.x.:.....:.:x....::....................:..:............:.:...:..x.........::::.....................x.......x.................:.x......x......::...x....x...:.....xx.:.:::..:....---.....:..............x.......x......:.x:......x.:.........x....x..::...:.--.::..:...:..:--x::..:.x.:..x:.x.x......:.x.:.:...::....x:x.x.:.........:..x.:..:::x....----.xx.:x:.x...xx:::...x:..--:x........:xx:....:..:..x:...:....x:.....x..:-..x:..:::...-.......x...:---------..x:.......------....---.....x....x::.....:.............x.......x...........x..x:...... 7M4D27M1D25M6D17M7D11M6I73M1D24M3I280M3D72M2I13M2I72M4D24M2I45M1D12M1I12M9D11M6D4M3I63M 586/792 74.0% 811/94230402 0.0% 61/792 7.7% 10496687 NA +7620 chr4 + 190214555 59416455 59416454 59416786 332 ACCTAATTAATAATACA-AGTCAAATATTCATCTTTAGAAGTGAAAAAATATAACTATTGGTTCTGGATTGAATCCAGACACTTTTTA-AAAATTTGACAATTTTT--ACTAGCACATTAAAGCA---GTCATTATTTACTGTAAATAAATTT--ATACATGTGTTTAGTAAGCTTTTTAATTCCAGTGAATGTGTTGTAT--TCATGCATGTCTTTTGGACAACCTTCAGATCTGCATTAACTAATTATTTCATAGTCTAG-GCAATGATTTTCTGGCCAAATCATCAATATGTGCAGTGTTATGTATCAACCTATAAATAACGCAG----------TTAAAGCTCTTTAGGA chr4 + 94230402 48894268 48894267 48894621 48894268 48894267 48894621 354 ATCCAGTTAGCAATCCATAGCCACCAACTCATCAATTAATATGAAAGAAATTAACTGCTAACTTTGAAATGACCTCAGCTATTTTCTACAGAGACTGACAACTTCACAACTGATGTATTAAAATAAGAGTAATTACTTATTGTAAACAAATTTCAGTTTACCTGCCCCCACAGCTCTTTAATTTCAAGAAGGATGATGCATCTTTTTGTGCGTCTGCTGGACAACCTTCAGCTCTGCATTAGCTAATTAAGTCACAGGAGGGAAAAATGTCTTTTATACAGAATCATCAATATAACATATTATTTATATTTACCCATAAATAAAAAAGGAAGAAGGTCTTTGAGTTCCTTGGGA .:.:.:...::...x..-..:..xxx.:.....xx.x:.x:.....:..xx.....::.:::.:..:.x...x::...x:.:...:..-.:.:x:......:..:x--...:::::......::.---..x....:...:......:......--:.x:.:x..:::xxxx....:.......:..:x:.:x:..x..:..--.:x..:::....x:..............x.........:.......xx...:..xxx:.-:x....x:...:xx:.x:............:xxxx:.xx.x.:...:x...:........x:x..----------..x:..:..:..:... 17M1I70M1I17M2I17M3I25M2I46M2I59M1I65M10I16M 210/332 63.3% 354/94230402 0.0% 22/332 6.6% 10522187 NA +3063 chr4 + 190214555 59426383 59426382 59426576 194 TCTTTTTTTCTTATTCAAAATACATACATAATTATTGATTTTACATATCTTTTCAAAATTGCAAATTTGGGTTTTCTTTCTATAGCAGTAGTTTTTCACATTTTTTTCTATTTATTATTATCTTGTTTTTTTTTTTTTCTAATTTCCTAAAGTCAAATAGTAAGGTCATATAAAGATAAATATTTCTTCTTTAA chr4 + 94230402 42992542 42992541 42992690 42992542 42992541 42992690 149 TTTTTTTTTTTTCCTCAAAAAACATG-ACAATCA-------------------CAAAATAGAATATTA----------TCTTTGGCTGTA---------------TTTCATTTATTGTGAGCTTTCTTTTTTTTTTTTTTCATTTTCTTTATTAACACAGTACATTATTATATACATAATAATTTTCTCCTAAA .:.......:..x:......x....:-.:...:.-------------------......x.x.x...x----------...x.:..x...---------------..::.......:.x.x...x:............:.x....:..xx.x.x.x.:....x:x.xx....x.x....xx....::..:.x.. 26M1D7M19D15M10D12M15D89M 105/149 70.5% 149/94230402 0.0% 45/149 30.2% 16433841 NA +3099 chr4 + 190214555 59433470 59433469 59433524 55 GGATATATATATATATTTTAAATATTTATATATATTTTATATATATATATATATA chr4 + 94230402 17668392 17668391 17668446 17668392 17668391 17668446 55 GAATATAGATGTATTTTTTAAATGTATATATATGTTTTAAACTCATATATATACA .:.....x..:...x........:.x.......:.....x.:x:.........:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 41765078 NA +3146 chr4 + 190214555 59444555 59444554 59444616 62 ACGCACACACACACACACACACACACACACATATACACACACACACACAACAAAATTGCATG chr4 + 94230402 23247730 23247729 23247791 23247730 23247729 23247791 62 ATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATG .:.........:x:.::x...:.:::.....:.............x:x..x...:..:.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 36196825 NA +3120 chr4 + 190214555 59444893 59444892 59444997 105 ACACACACACACACACACACACACACACTGGCAGTTTGAAAAACGGAGAAAACAATGCAAGAAAAGGCAAAGAAAGCAAGTTTTTCAATTAAAAAATT--AATCTAT chr4 + 94230402 91043356 91043355 91043462 91043356 91043355 91043462 107 ACACACACACACACACACATATATATTTAAGCTTAATTAAATATGGATTTTCCATTGCAGGAAAAAAATAGAGAAGCAAATCTTCTGATTATAAAGCTGAAATCCAT ...................:.:.:.:x:x:..xxxx.x...x.:...xxxxx..x....:.....::xx.:::......:.:..:::....x...::.--....:.. 98M2I7M 67/105 63.8% 107/94230402 0.0% 2/105 1.9% -31598463 -62631939 +3730 chr4 + 190214555 59458273 59458272 59458356 84 ACATAGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGTCCAGGAAGTTGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.....::...:--......:.........::::........x:xx.x.:.x.......::....:.:x..x:.....:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% -16574923 -77655479 +3133 chr4 + 190214555 59497122 59497121 59497178 57 CAAGATACACACACACACACACACACACACACACACACACACACACACATATATATA chr4 + 94230402 74526070 74526069 74526126 74526070 74526069 74526126 57 CAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ......x..............::x...:.....x.:.:.:..::.:.:..:...x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -15028948 -79201454 +3198 chr4 + 190214555 59554401 59554400 59554468 68 AATTTTGTTTAACATAGGAATTTGGTCAAGCTGCTATGTATTTTTTTTTTCTTTTTTTTTCTTTTTTT chr4 + 94230402 64139542 64139541 64139601 64139542 64139541 64139601 60 AATTCTGCTTTACAT--------GATGCAGCTTCTATGTATTTTCCTTTTTTTTTTCTTTCTTTTTTT ....:..:..x....--------.:.xx....x...........::....:.....:........... 15M8D45M 49/60 81.7% 60/94230402 0.0% 8/60 13.3% -4585141 -89645261 +3317 chr4 + 190214555 59564217 59564216 59564290 74 GCGCACCTGTAGTCCCAGCTACTCTGGAGACTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:x::..:.....x.xx.x...x.:........::.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -16468987 -77761415 +3001 chr4 + 190214555 59596990 59596989 59597058 69 CATTCAATATTCTTTCTTTCTTTTTCTTTTTTTGTTTCTTTTTTTTTTTTTTTTTCTTTGAGACAGAGT chr4 + 94230402 77794360 77794359 77794428 77794360 77794359 77794428 69 CATAAATTATTCATTCATTCTATGCCCGAGTTTGTCTTTTTTTTTTTTTTTTTTTCCTCTTGGCAGAGT ...xx.x.....x...x....x.x:.:xxx.....:.:..................:.:xx.:...... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -18197370 -76033032 +3143 chr4 + 190214555 59597009 59597008 59597068 60 CTTTTTCTTTTTTTGTTTCTTTTTTTTTTTTTTTTTCTTTGAGACAGAGTTGTTTAGCCA chr4 + 94230402 73181453 73181452 73181512 73181453 73181452 73181512 60 CTTTTTCTATTTTTGTTTGTTTTTTTGTTTTTTTATATATAAGAAAGTGACATTTAGCTA ........x.........x.......x.......x.x.x.:...x..x.x::......:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -13584444 -80645958 +3180 chr4 + 190214555 59622915 59622914 59622973 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -16410291 -77820111 +3112 chr4 + 190214555 59657735 59657734 59657816 82 TCTCAGGAGAAACTCTACAAGCCAGAAGAGTATTCAACATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 49452708 49452707 49452785 49452708 49452707 49452785 78 TCTAAAGAGAAAATGCAG----CAGAAAAAGGTTCAACCTACTAAATTAAAAACATAAAAAACAACCAAAAAAAAAAAAAAA ...x.:......x.x:.x----.....:.:x:......x.x.....xx.....x.x......x..xx............... 18M4D60M 59/78 75.6% 78/94230402 0.0% 4/78 5.1% 10205027 NA +18284 chr4 + 190214555 59674515 59674514 59675116 602 ATTTTTCAAGTGGCAGCTGCTCCATTCACTCAGCGGGTAATGCCAGCTACTCCATCACTGCTAACCC---------------CAGGGAAGGCCAC----TTAGTGTGCAACTGCCACTTTAGGGGGATTTCA-TATTTGCAGAGTTAGCAGACTATGTAATCTATTGCATTTTCTATATATGTTCCACACAACTTTTGAAC---ACAAACAGGAAGATGTTTTAAAGAAATATATTGAAACCCGTTGTCCTCTCTGCCACAGCCAGGGTCATTG--------------GAGTTATAGAGTTATAGGAGTTCGTTTGAAAATAGATAATCAAGAGAAGCAAGGTAATGTAAGTAAAAGCATAAAATGAATTTTATGTATCATTAATTCTGATAACTGATTTTATTGCTTTGGAAAATTATTATGGCAGTCTGCTACAAAACACTTAACCTAATTTAAATTTCTGAGCACAATTTTTG--GCAAATCATTAGAAGCAATATTTTTAATCAATGAAGTGGATCTAATTTGGATCTCAGACACACCAAGATAGAAAGAGAAAAAAAAAAAGTTTCCTAAGGT-TAGCACTTCATATTTC-ACAGCTGTGTTTTAAATGTTGTTATATGGAGCAAAATT--GAATGATGA chr4 + 94230402 48964541 48964540 48965163 48964541 48964540 48965163 623 ATCTTAGAAATAGCATCTATTTCATTCACTCTGCTTAAAA-ACTGGGAAATCCAGGACTGCTGCCCTTCACTATTTTTATGACATTGAAGGGCATAGGTTGATTACACTTCTGCCACCTTTTTGGTTTTTCAATTGTTGTGAAGTTA--AAGCTGT----TCTTTTGTCTTTTTT-TCTATTTTCT-TGTGATTTTTGTTCTGAACAACCAAGGCAAT-TTTAAAAGGGTTGTACTAACTGGTGGTGTCCTTTTAGTTGCAAGAAGGGTCACTGTATGGTGTAGAACAGCTTTATGAAGCTATGCAACTTGGTTTGAAAACAAATGAGGGAGGGACGTAAGGTAATGCAAGTAAAATCATAAAATGAATTTTATGTATCATTAATTCTGATAACTGATTTTATTACTTTAGAAAATTATTATGGCAGTCTGCTACAAAAAACTTCAACTAATTTAAATTTCAGAACACATTTTTTTTCGCAAATTGTTGTAAGTAATATTTTTAATCAATGAAGTGGAGCTAATTTAGATTTCAAATGCTTTA------------AAAAATGATGAGCTTGCTAAGATAAAGCTTTTTATTTTCCTGCTACTATGTTTTTCCTGTCATTATTGAGAGGAGGACTTAGAGTGACAA ..:..xx..:.:...x..::.:.........x..xx:x..-:.::.xx.x....xx......:x..:---------------..xx.....x..:----.x.x.:::.xx.......:..xxx..xx.....-.xx...:::.....--.::..:.----...x...:x....:.-.x...x...:-::::.:.....xx.---....x..:.:x:..-...x....::x.:..:.:.xxxx:.x......:.:x.:::..:xx.......:..--------------.xx....::..:...:x:.x..x.........:.:..:.xx:..:..x.:.........:........x...............................................:....:.............................x....x.x..............x..:....x.....x--......::..:x...:........................x.......:...:...:.::.x::.------------.....x:.x:..:..x.....:.-x...x:..:..x..:.-:.x:..:......xxx...::....xx:...x.::.:.--..:...::. 40M1D26M15I13M4I33M1I14M2D7M4D15M1D10M1D14M3I14M1D55M14I188M2I65M12D23M1I16M1I38M2I9M 412/580 71.0% 623/94230402 0.0% 65/580 11.2% 10709974 NA +3220 chr4 + 190214555 59688303 59688302 59688385 83 CATAGTGGCTGGCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--..:.x......:.........:..:........x.xx.x...xx:.x.......:.:..x:xx:.x:..... 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -16344894 -77885508 +3094 chr4 + 190214555 59691486 59691485 59691552 67 TGCATAAATGTCTTCTTAAAGTATAATATATATATGTGTATATATATATATATGTGTGTGTATATAT chr4 + 94230402 88298959 88298958 88299025 88298959 88298958 88299025 67 TGTGTGAAAGTACTACTAAAACATTATGAAAATGTGTATACATTCATATATATGTGTGTGTATACAT ..::.:..x..x:.x:....::..x..:x.x..:...:..:..x:...................:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -28607473 -65622929 +3077 chr4 + 190214555 59691536 59691535 59691587 52 TATGTGTGTGTATATATATATATGTGTGTGTATATATATATATATGTGTGTG chr4 + 94230402 48958675 48958674 48958726 48958675 48958674 48958726 52 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTG .:.....x......:..............:......x....:x.x..xx... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 10732861 NA +3009 chr4 + 190214555 59691538 59691537 59691578 41 TGTGTGTGTATATATATATATGTGTGTGTATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x.:....:......:..............x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 10732863 NA +3009 chr4 + 190214555 59691558 59691557 59691598 41 TGTGTGTGTATATATATATATATGTGTGTGTATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x.:....:..............:......x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 10732883 NA +3000 chr4 + 190214555 59691560 59691559 59691600 41 TGTGTGTATATATATATATATGTGTGTGTATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x.:....:......:..............x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 10732885 NA +8444 chr4 + 190214555 59700410 59700409 59700995 586 GCCCATCTGTTGTCTTCATACTTTATTCAATAGCTATCAATGGATGCCAATG--TGGAGTTACTACTTTG---ATATGAGCCTT--AGCACAAAAGGCTTTAAATAATTAAAAATGATAGAATTGGGACAGACTGCTAAACATAAACAGAA-GGATAAAAAGACATCTGGTATAATTAACAGTGAGTAAAGCAGGTTTAACTA--------------GCTTGAGTACAA----------------------AGTACATTGAAACA----------TCATGAAA--------------AACTGAGAAACTTCT---GTCGAGAGATAATTTTACTGATATGTAACT----TAAAATATTTCTCTTCAATTG----------CATTTTTATT--------AATTGGGACATTTCCATAAAATGGGGTATATAGT------TTTTAGATTGAACCTGCTCCTGCTGCTTGTTTCTCAGTTGAAGGCATAATCCTTTGTTTGTGACTATGAAATTGGCTTATGTAGAGATGATTATGATGTACATTCAGAGA----ATTGTGACTTCAGGTGAGAAATAAGCAGCAGGAACAGATGAACTCTTAGCAA----CAGAGAAGCTATTTTCATGCAAATATCCCCACAGT---GGCAGAAA-GATGAGAAAAGAGAATTACAGAACACAGA--AGGCTTACAAAAA chr4 + 94230402 48974579 48974578 48975259 48974579 48974578 48975259 681 GCCCATCTGCTGTTCAACTACCTTATTTAATAAC----AGTTGATGTCAAGCACTAGTGCAACTCCCTGGCATATAGCAGCCTTTGAGCATGAGGGATTTCAGATAAAGAGCAGAACTGAAACTGAGATTGGCTGATAAAAACAGATATAATGAATCAACAGCCTCCTCATACAGTAAGCAAAAGGCAAACCACAATTTGTTGCGGATTGCAGGTGGGCTGGAATCCAGTGATCTGTACCAACTGATAACGGGTAATTTGGAACCAGTTTGTGGTTTTTGAAATTATTTTTAAGATTAACTGAATGCTTTGTAGAGTCTGAAAAATATTCCACAAGAATGTAGTTCAGCTAAAATATCTCTTGGTAATTAATGACTCTTCTGTTTTTTTTTCCTCTTAAATGGATGCATTTGCAT--------GCAGACAGTATCTCACTTTATGTGAGCCCTTCTGTTCCCTCTGATCTCTCAGCTGAAGTCATAAGCCTTTGTTTGTGACATCAGCATGGGTTGCTGTGTAGGTGATTATAATGT---TAAGGAGAGCACATTATAACTTCAGGTGAGGAATGAACAGCAGGAGCAGACAAA---TTAGTAAGTTGCAAACATACTGTTTGCATGCAAATGCTTCCATTGTCAAAACACAAATGTTTCAGAGAAAGATTTGCAGAACATAGAACAGGCAGGCAGAAA .........:...::xxx...:.....:....:.----.:.x....:...xx--.:.x.:x...x.:.x.---...xx......--....::.::.::..:.:....xx.:x.:x:x.::..:..:..:x.:...x....x.:.:.:.x..-.:..x..x..x.x:..x:..:.:.x.:..:x::.:...x..x:x..x::.:--------------...x..:.x..:----------------------:...xx...:...x----------.:x.....--------------......:x:x:..x.---...x::.:.xx...::..x::x.....::.----........:...:xx:....:----------::.....x..--------...x.:x:.....x...--------.:.x.:...------:....x:.x::x...x..x:.x.:x..x:.:......:.....x.....x..............xx:::x..x..:.xx...:x..:.......:....---.xx:....----...:.:............:...:.:........:....::..---....:..----..:.x.x:..:...x.........::::...:x..---::..x...-.x.xx::.:.:...x..:.......:...--....xx:..:... 34M4D14M2I16M3I11M2I65M1I51M14I12M22I14M10I8M14I15M3I30M4I21M10I10M8I17M8D9M6I99M3D8M4I42M3D7M4I35M3I8M1I29M2I13M 369/568 65.0% 681/94230402 0.0% 131/568 23.1% 10725831 NA +3278 chr4 + 190214555 59707975 59707974 59708025 51 TAAACATACATACATACACACACACGTGTGTATGTATGTGTGTGTGTATGT chr4 + 94230402 44243258 44243257 44243308 44243258 44243257 44243308 51 tatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT ..x.:.:...x...:................:...:...x.....:...:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 15464717 NA +3179 chr4 + 190214555 59707978 59707977 59708049 72 ACATACATACATACACACACACGTGTGTATGTATGTGTGTGTGTATGTATATATGTATATACATTTTATTGG chr4 + 94230402 80774377 80774376 80774448 80774377 80774376 80774448 72 ACGTATGTGCATAAAAGCACACGTATGTATGTATATGTGTATGCATGCAACTGTCTGGACATAGTTTCTTAG ..:..::.:....x.x:.......:.........:.....:..:...:.xx.:.x.:x.:.:.x...x..:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -21066399 -73164003 +3027 chr4 + 190214555 59708008 59708007 59708059 52 GTATGTGTGTGTGTATGTATATATGTATATACATTTTATTGGTTTTTTCTCT chr4 + 94230402 23522769 23522768 23522820 23522769 23522768 23522820 52 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTT ...:............:.......:.....x.x....x:..x....:.x.:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 36185239 NA +3896 chr4 + 190214555 59748040 59748039 59748118 79 GTGGTACGCACCTGTAGTCCCAGCTACCTGAGAGCCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGCTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--....x......:........:...:..x.....x.xx.x...x.:.........:.:..x.xx:........ 5M2D72M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% -16285161 -77945241 +3027 chr4 + 190214555 59755797 59755796 59755842 46 GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAT chr4 + 94230402 56386569 56386568 56386614 56386569 56386568 56386614 46 GGGTTTTTTTTTTTTTGGTGTTCTTTTCTTTTTTCTTTGTAAATAT ................xx.x..:....:......:...x....... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 3369228 NA +16140 chr4 + 190214555 59766984 59766983 59767271 288 AATATTGTTGATGATGATGAAAATAAAAAGACTATTTTAAGTGTTCAATATGCAGGGCATGCATGATGACTCATTAGGCAGAGAAAATTATTACTGCCCATTAAAGAATTAGCTCTCATACAAA-TGGAAAAGTTGATTAGTGAACCTCAGAGTGGCTGGTTCCTAAAATTATAAAATTAATGAATATATGAAATATTTGATTTCACACATAAATATCCATGAAGATAAATTAATTGTTTTATATAATAAAATCATTTAGCTTACATGCTGGATCAAATATTAAATTTG chr4 + 94230402 48994251 48994250 48994538 48994251 48994250 48994538 288 AATATTGCTGAAGTTGATAAAGATGGGTCTA-TATTTAAAGAGATCAGGATTCGCAACACGTTTCGTGACTTATTATGCAGAGAAAATTATTACTACCCATTAAAGAATTAGCTTTCACATAAAATGAAGAAGTTGATTAGTGCACCTCAGAGTGGCTAGCTTCTAAAATTATAAAATTAATGAATGTATGAAATATTTAATTTCACACATAAATATCTGTGAATAGAAATTAATTACTGCATGCGATAAAGACATTTATTGCACATATAGGATCAAATATTAAACATG .......:...x.x....:..:..:::xxx.-.....x...x.x...:x..x.:x::..:.:x.x:.....:....x..................:..................:...:.:...-..:.:.............x..............:.:.:.......................:............:..................::....x.x.........::.x:..:::.....:x......x:x:....::x...............:x.. 31M1D92M1I164M 225/287 78.4% 288/94230402 0.0% 2/287 0.7% 10772733 NA +3105 chr4 + 190214555 59767776 59767775 59767830 55 TTTTTTCTTTTTCTTTTTCTTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 81168751 81168750 81168805 81168751 81168750 81168805 55 TTTTCTCATTTTCTTTTTTTTTTTTTTCCTCCTCTTTCTCCCATTCATTTATTGA ....:..x..........:.........:.:......:.:::x..:x...x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -21400975 -72829427 +3278 chr4 + 190214555 59794981 59794980 59795062 82 GTGGTGGCACGTGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----..x.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 6M1D6M4D65M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -16238220 -77992182 +3351 chr4 + 190214555 59797421 59797420 59797496 76 TTTTCTTTACTTTTCTTTTCTTTTTTT--------CTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGTTTAGATGAAGTTTCACT chr4 + 94230402 90152599 90152598 90152682 90152599 90152598 90152682 84 TTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT .....::x:.:.:.x..::..:..:..--------...:....::.:....::.x..........x......x...:....... 27M8I49M 55/76 72.4% 84/94230402 0.0% 8/76 10.5% -30355178 -63875224 +3326 chr4 + 190214555 59799148 59799147 59799192 45 ATTCCTAAGATATATATATATATATATATACACACACACACACAC chr4 + 94230402 85078503 85078502 85078547 85078503 85078502 85078547 45 ACTCCTAATATATACAGATATCTATATATACACACACACACACAC .:......x.....:.x....x....................... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -25279355 -68951047 +3082 chr4 + 190214555 59799154 59799153 59799197 44 AAGATATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409078 4409077 4409121 4409078 4409077 4409121 44 AGGCTGTACATATATATATATATACACACACAGAGACACACACA .:.x.:..:.......................x.x......... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 55390076 NA +3001 chr4 + 190214555 59799214 59799213 59799256 43 TATATATACATGTATACATATACACACACACACACACACACAC chr4 + 94230402 43671851 43671850 43671893 43671851 43671850 43671893 43 TGTCTATACATGTATACACATGCACACACACAAACACATGCAC .:.x..............:..:..........x.....::... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 16127363 NA +3194 chr4 + 190214555 59799229 59799228 59799284 56 ACATATACACACACACACACACACACACACACATATATATATATACACATAGCAGT chr4 + 94230402 46140856 46140855 46140911 46140856 46140855 46140911 56 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGT .:.....:........x.x....:........:.:......:.x..x:.:..x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 13658373 NA +3110 chr4 + 190214555 59807691 59807690 59807763 73 TGTGCCTGTAGTCCCAGCTGCTCAAGAGGCTGAGGTGGGAGGATCATTTGAGCCTGGAAGGTCGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:......:..::.:........x:xx.x.:.x..:....:..::....x.:x:....::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -16225514 -78004888 +3045 chr4 + 190214555 59816127 59816126 59816194 68 AGAAAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGAAAGGAAAGA chr4 + 94230402 40243295 40243294 40243362 40243295 40243294 40243362 68 AGGAAAAGAACAGAGTAAATAAGGGGAAAGGAAGGGGGAAGGGAAGTCAGCAAGCAGAGAAAAAGAGA ..:.......x::.:x...x..:::..........::.:.......xx..x...x..::..::.:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 19572832 NA +6933 chr4 + 190214555 59821686 59821685 59821950 265 CTGCTCTTT-TCACTTTCACCTGCCTGTCAATTGTCAGTTTAAGTAAGTCTGCTATATATATTTTTTCTTTTCTTTCT--ATGAAAAATGGTAGAAAT-TTTCACATGACAGTTAGTAATTGCAGAAGTTCCACAGGGACTAATATTCAATGTGCTAGTTG----AAGCAAGATAGTCTGGATACAATTATTAAAGTCATTTCCCAGAGCACCACAGGTATCCTCTAAAGATGAGGGGTGAATAGATTTATTTATTGCTCTCATCAAAAACTT chr4 + 94230402 49025722 49025721 49025985 49025722 49025721 49025985 264 CTGTTCCCTATTGTTTTTGTCTGTCTTTCAGTTGTCATGTT--GTGAGAAAGACAACCACCTTATCCCTTTTCTTTCCTGCTGAACAATAATGGAAGTCTTTTGTGTGACGTCTCATAACTTGCTGAGTTCCGCAGGGACTA-TACT---TGTTCTAGCTGCTTTGATCAACAGTGTCTGGATACAATTAATACAATTATTTTCTTCTGTACTGTAGACGTCCTTAGAAGATGA---GTGAATAGATTTATTTACTGCTGTCATTACAATCCT ...:..::.-.:::...:::...:..x...:......xx..--..:..xxx.x:.xx:.:x..x.::..........:--x....x...::.:...:.-...::::....:x:.x:...:.xxxx:......:.........-..:.---...x....:..----:.x...x.xx...............x..x.:.:....:.:xxx.:..:::..:::....:x:.......---.................:....x....:.x..x.:. 9M1I31M2D35M2I18M1I43M1D4M3D11M4I69M3D36M 172/256 67.2% 264/94230402 0.0% 17/256 6.6% 10795964 NA +3238 chr4 + 190214555 59827553 59827552 59827645 93 AAAGATTAACGTCTTAAATGAGAAAGTTATAGAGCAAGTAGAATAATTCAAGTCCAATAAATCACCAGGACCATATGGTATATATCCAAGATT chr4 + 94230402 61302798 61302797 61302890 61302798 61302797 61302890 93 AGAGATTGAGGTGTCAGAAGAACAGACGCTGAAGGAAACAGATAAATGAAAGAGTAACAAGTCTTTAGGACCAGATGGTATATATCTAAGATT .:.....:.x..x.:.:.x..:x.:::xx.::..x..::...xx...xx...xx:..:..:..x::.......x............:...... 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% -1475245 -92755157 +3211 chr4 + 190214555 59828069 59828068 59828121 53 GTTTCTTTTTCTTTTTTTTCTTTCTCTCTCTCTCTCTCATGGTGGTTGTGTTG chr4 + 94230402 30018938 30018937 30018990 30018938 30018937 30018990 53 GTTGCTTTTTTTTTTTTTTCCTTCTCTCTCTCTCTCTCCAGTTTATTGTCCTG ...x......:.........:.................xx.x.x:....x:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 29809131 NA +3901 chr4 + 190214555 59875303 59875302 59875468 166 ATGTTTTTATTTTTAT--TTAGTTTTAATTACTTATGATAATATTTCATAATGTATCAATTAATGTTCTGTAGCATAGTGTATAAATTTAATAAAGTTCAGAATACAAAAATTTCAAGTAACAAAA----------AGCTATTAATTATTT-----TAAGAGAAATGAGATAGTTCATTTTTT chr4 + 94230402 5559998 5559997 5560166 5559998 5559997 5560166 169 ATATTTTGACAATTATGGTTGGGCTTAATCATTTATGATAATACTTCATAATGCTCTAGCAAATGCTCTGGAGTATACTCTGTAA--------------AAAATAATGAAGTCTTAAGTAACATGGCAACTCACTCAGCTTTTAAATTTTTGCTCAGAAGCAGAAGGAAACAGCTTGTGTTTT ..:....x.:xx....--..:.x:.....:.:...........:.........:x::.::x....:....x..:...x.x.:...--------------.:....xx:..:.:.:........x::----------....x....x.x...-----x...x::..x..:.:..:.::.x.... 16M2I67M14D27M10I15M5I27M 104/152 68.4% 169/94230402 0.0% 31/152 20.4% 54315305 NA +3555 chr4 + 190214555 59899321 59899320 59899413 93 TCCATATATATATATATATATATATATATATATATAT----------------------------------GTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTAT chr4 + 94230402 68837024 68837023 68837150 68837024 68837023 68837150 127 TTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .:...:.:......:...:...:...:x..:.:.:.:----------------------------------.....:.............:.:...x...:..::...:.:..:..x.:..x.x... 37M34I56M 67/93 72.0% 127/94230402 0.0% 34/93 36.6% -8937703 -85292699 +3204 chr4 + 190214555 59899324 59899323 59899390 67 ATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTATATACACATATATG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:::...:xx.:....:.:x.:x.:x..x..............:.......:..:::......... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 32573833 NA +3019 chr4 + 190214555 59899333 59899332 59899387 55 TATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTATATACACATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....:.:x.:x.:x..x....:.........:..........::....:.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 32573831 NA +3001 chr4 + 190214555 59899347 59899346 59899420 74 TATATATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTATATATACA chr4 + 94230402 39937175 39937174 39937248 39937175 39937174 39937248 74 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA .........:.....::...x......::xxx.x:.....:xxx:...:.:.....x.....::..x..:.:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 19962172 NA +3239 chr4 + 190214555 59899347 59899346 59899426 80 TATATATATATGTGTGTGTGTGTGTGTGTATATACACAT----ATATGTATATATATACAAATATATGTATATATACAGGTATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.:...x...............:...xx.::.----...::...:..x.....x:.x....:.:.:.....x::... 39M4I41M 57/80 71.2% 84/94230402 0.0% 4/80 5.0% -25935186 -68295216 +3080 chr4 + 190214555 59899349 59899348 59899417 69 TATATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTATATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:..x..........x...x...x.....:..:.::.....:x.:.xx.x:.:........:.::.:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -10194793 -84035609 +3180 chr4 + 190214555 59899349 59899348 59899426 78 TATATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTATATATACAGGTATG chr4 + 94230402 38686921 38686920 38686998 38686921 38686920 38686998 78 TATATTTATGTTAGAGTGTGAGCATACAAATGTACACCCATGTGTATATGAATAAAGATCTGTATGTATACATACATG .....x.....xx.x.....x.::.::.x..::...:x:....:.....:x.:...x..x.....:......x::... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 21212428 NA +3230 chr4 + 190214555 59899349 59899348 59899468 120 TATATATATGTGTGTGTGTGTGTGTGTATATA------CACATATA----------TGTATATATATACAAATATATGTATATATACAGGTATGTATATACATATACACGTGTATACGCATATACGTGTATATACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....:..:.....x.x....x.:..:.x....------........----------.:..::...:...xx..::x.x.:.:....::x.....x....:...::.....x.xx...:-:.x.x:...x:.:.... 32M6I8M10I62M1D17M 81/119 68.1% 135/94230402 0.0% 17/119 14.3% 38790155 NA +3880 chr4 + 190214555 59899349 59899348 59899431 83 TATATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTATATATACAGGTATGTATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.............:.:..:xx..:..x.:...:....::.....:....x...::...x:..:::.:.. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% -25935184 -68295218 +3286 chr4 + 190214555 59899351 59899350 59899470 120 TATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATATATACAAATATATGTATATATACAGGTATGTATATACATATACACGTGTATACGCATATACGTGTATATACACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTA----------TATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.:....x..----------...:..:x:...x...:x:..:..:x..:.x.......:x:.:::x.x:::..:...::.:..:x.::..:..::..... 30M10D80M 69/110 62.7% 110/94230402 0.0% 10/110 9.1% 38790157 NA +3114 chr4 + 190214555 59899565 59899564 59899636 72 TACGTATACATGCATATGTGTATATACATGTACATGCATATGTGTATATACATGTACCTGTATGTGTATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ..::..x...::.....:x..x....:xx...::...:.....:..:..........x:x...:.x:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 18150469 NA +3187 chr4 + 190214555 59899568 59899567 59899708 141 GTATACATGCATATGTGTATATACATGTACATGCATATGTGTATATACATGTACCTGTATGTGTATATACATGTGCATGTATGTGTATGTATATGTACATGTATATGTGTGTATATA-CATGTACGTGTGTATATACATGTA chr4 + 94230402 89812946 89812945 89813086 89812946 89812945 89813086 141 GTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA ..x..:...:xx:...x.:.:-:...:..x..:x............x:.x:.:...xx..:::.:.::.x.:x:x....::.:...x:x.:.:...:::.......:...x..x..x-..x..x:x.:..x.:.x:...... 21M1D95M1I24M 84/140 60.0% 141/94230402 0.0% 2/140 1.4% -29913378 -64317024 +3744 chr4 + 190214555 59899571 59899570 59899682 112 TACATGCATATGTGTATATACATGTACATGCATATGTGTATATACATGTACCTGTATGTGTATATACATGTGCATGTATGTGTATGTATATGTACATGTATATGTGTGTATA chr4 + 94230402 21109190 21109189 21109301 21109190 21109189 21109301 112 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.x.::.:......:.x.x::..x:.:.::x...:....:x:....:...::..:.::x....:::....:.x::.::x.x.:.........::...x.....::..:.:. 112M 66/112 58.9% 112/94230402 0.0% 0/112 0.0% 38790381 NA +3605 chr4 + 190214555 59899582 59899581 59899713 132 GTGTATATACATGTACA-------TGCATATGTGTATATA--CATGTACCTGTATGTGTATATACATGTGCATGTATGTGTATGTATATGTACATGTATATGTGTGTATATACATGTACGTGTGTATATACATGTACATGT chr4 + 94230402 5214181 5214180 5214321 5214181 5214180 5214321 141 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....:x...::x.:...-------....x:....:x:..:--..:.:.:.:..:....:::.x:::.x....:::.::.x..:..:....:.:x..:..:......:::.x..:...::...::.::.x.::...:..::. 17M7I16M2I99M 77/132 58.3% 141/94230402 0.0% 9/132 6.8% 54685401 NA +3318 chr4 + 190214555 59899617 59899616 59899677 61 TGTACCTGTATGTGTATATACATGTGCATGTATGTGTATGTATATGTACATGTATATGTGT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x.:......::..:.....::..::...........x:x:......:...:...:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 4205169 NA +4095 chr4 + 190214555 59899626 59899625 59899778 153 ATGTGTATATACATGTGCATGTATGTGTATGTATATGTACATGTATATGTGTGTATATACATGTACGTGTGTATATACATGTACATGTATATGTGTGTATATACATGTACATGTATATGTGTGTATACATGTATAT-GTGTATGTGTGTGTATA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATA------------TGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..x..:x..........::.x.x....x::....x.:..------------....:x:....:...x:.....:x..:.:...::.::x:...:x.x.:.:..:....::...x.....::..:.:..:x.xx..:-..x.x....x.....:. 39M12D85M1I17M 91/141 64.5% 142/94230402 0.0% 13/141 9.2% 38790439 NA +3598 chr4 + 190214555 59899646 59899645 59899783 138 GTATGTGTATGTATATGTACA---------TGTATATGTGTGTATATACATGTACGTGTGTATATACATGTACATGTATATGTGTGTATATACATGTACATGTATATGTGTGTATACATGTATATGTGTATGTGTGTGTATACATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:x.x..:..x.....x:..---------..:.x:....:x:..:x:..:.:.:x:....:.:::..x..::x..:.:.::::.x..::.::...:.:x..:..:......:::.x.:..:.:....:...::x:...:.:..:.. 21M9I117M 78/138 56.5% 147/94230402 0.0% 9/138 6.5% 54685471 NA +3113 chr4 + 190214555 59899687 59899686 59899802 116 TGTACGTGTGTATATACATGTACATGTATATGTGTGTATATACATGTACATGTATATGTGTGTATACATGTATATGTGTATGTGTGTGTATACATATATACATATACACATATATG chr4 + 94230402 5214205 5214204 5214316 5214205 5214204 5214316 112 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATG----TGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ..:.x.....:x:..:x:::::...x::.:....:.:.x:.::x..:...:::..x.::......:...x.::...----......:.:.x..:.:.:.::::..:..x..:.:.. 76M4D36M 64/112 57.1% 112/94230402 0.0% 4/112 3.6% 54685482 NA +3072 chr4 + 190214555 59909407 59909406 59909491 85 CCCCTTTTTATACATACATATATATACACATATATATATATATACACACACACATATATAATATATATCCTATTTATATATAACT chr4 + 94230402 41650569 41650568 41650653 41650569 41650568 41650653 85 CCTTGTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTT ..::x.....xx.x.....x.xxx..x.................:.........:.::..x:x...:xx:.....xx..::.::. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 18258838 NA +3407 chr4 + 190214555 59909429 59909428 59909482 54 TATACACATATATATATATATACACACACACATATATAATATATATCCTATTTA chr4 + 94230402 9193586 9193585 9193639 9193586 9193585 9193639 54 TACAAACCTATATATATATATATACACACACACATATGATATAAACCTGATTTA ..:.x..x..............:.........:....:.....x.:.:x..... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 50715843 NA +3062 chr4 + 190214555 59909431 59909430 59909484 54 TACACATATATATATATATACACACACACATATATAATATATATCCTATTTATA chr4 + 94230402 80533071 80533070 80533124 80533071 80533070 80533124 54 TAAACTTATATATATATGTACACACATACATATAAAATGTACAGTCTAATTGCA ..x..x...........:........:.......x...:..:.x:...x..::. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -20623640 -73606762 +3677 chr4 + 190214555 59915465 59915464 59915529 65 TGTGTATATATATACACACATATACATATATGTATGTGTGTGTATGTGTGTGTGTGTACATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:....:xx.:..:....x.:x..x..x..:.:...................::.......... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 32589973 NA +3095 chr4 + 190214555 59915467 59915466 59915527 61 TGTATATATATACACACATATACATATATGTATGTGTGTGTATGTGTGTGTGTGTACATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.:...:..:.....:....:.:.........:.x:x::...::.......:.... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 4221019 NA +3038 chr4 + 190214555 59915695 59915694 59915738 44 TATATTCTATATATCATATATATATACACACACACACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....:xx...:...:...........:.:............... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 29081502 NA +3158 chr4 + 190214555 59933180 59933179 59933256 77 CTTTCATTCTCCTTCCTTCATTCTTCCTTCCTTCCTTCTTTCCCTTCCTTCCTTCCTTCTTTCTTTCTTTCCCTTCC chr4 + 94230402 20861466 20861465 20861541 20861466 20861465 20861541 76 CTTTCATCCTCTTGTCATCTTTTTCCCTTCTCTCCCTTTTTCCC-TCCTTCCTGTCTTCTAATTTTTATCTGCTTTC .......:...:.x:.x..x..:.:.....::...:.:......-........x:.....xx:...:x.::x...:. 44M1D32M 53/76 69.7% 76/94230402 0.0% 1/76 1.3% 39071714 NA +3038 chr4 + 190214555 59933261 59933260 59933334 74 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTT chr4 + 94230402 53757784 53757783 53757857 53757784 53757783 53757857 74 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ...::.:.:x:...::.:x.:..:.xxx.:..::..::..::..:.:.:...:........:.......:.... 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% 6175477 NA +5162 chr4 + 190214555 59945615 59945614 59945891 277 AAGAGCAGTGATAGGCAGAATGAAATAATTATTGATAAGCAGAATAATATAATGATTCT--CATGTTTAATGATTTTAAATATTATATTTTTACAGAATGATTGGATCTAATGCTAATTAAAAACT--GTTTACATGTTCT--------------CTATTTGAAGAAAGAATGTAGGCCCATTAAGTATCATTCTATAATGGAAATGAAAAAGTCGAC--TAAATTAGAGAAAAGCTTTTATCCACTAATATGCAGATAGCAGGCAGCATCTGTTCTATCACTGCTATGAATCAGCA chr4 + 94230402 49059480 49059479 49059755 49059480 49059479 49059755 276 AAGAACAGAGGAATGCAGAATGGAATA-TTGTCATTTCTCACAAAAATG-AATGTTGCCAACATATTGAAT---TGTAAATGTCATGGTTT------GTGTTTTTGTCTTTTTCTTTTTGAAGTATTAGTCTGCGTTCTCTTCCTCTACCTTTTACTACTCCTAGGCAGAATTTGGGTCTGTTAAGTGTCATTCTGTAATGGAAATCTGAAGGTCAAAAGTAAACAGGGGAGAGGCTTTTATCCATTAATGCAGAGCTAACA--CAG-----GTT---TTACAGTTATGAATCAGCA ....:...x.:x.x........:....-..:.::x.xxx..x..x...:-....x.x.:--...:..x...---.x.....:.:..:x...------:..x..xx:...xx.x..xx..:..:xx.--..:.:.:.x:...--------------...:.:xx..:x.....x.:..:.::......:.......:..........xx:..:...:.x--....:x:.:..:.:...........:....:::x..x..:..--...-----...---.:..x.:............ 27M1D21M1D9M2I10M3D17M6D29M2I13M14I63M2I42M2D3M5D3M3D19M 176/256 68.8% 276/94230402 0.0% 41/256 16.0% 10886135 NA +3073 chr4 + 190214555 59952076 59952075 59952130 55 TAATATATGTATATGTATATATATATGTATATATACACATGGGATATGTATATAT chr4 + 94230402 9864501 9864500 9864555 9864501 9864500 9864555 55 TAACATATGTGTATGTATACATATATGCATGTGTGTGGATGGGAATTATATACAT ...:......:........:.......:..:.:.:::x......xx.:....:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 50087575 NA +4852 chr4 + 190214555 59964960 59964959 59965225 266 AAAACTTTTTTTAAAGTTTTTGTGTTTTTCTCTTATGCTAACTTATGTTTTAATTCTT-CAACTTTACTTCGTTCATCTGTTCAACCTCAAGACTCTGATATAGTTTATGTTTATAACCATGAAATATGCAAAATTATATGTAATTATAAATT--TATATTTCCAAATCAATTTTGAAAACTAGGACAAAATTTTTCCAGAAGGAATTTTCAGATAATTAAAGCATTAAAG-------ACTCATATTTTAATATTTGCCAAAAAGATGACAGGTCT chr4 + 94230402 49062041 49062040 49062289 49062041 49062040 49062289 249 AAATCCGTCTTTTTAATCTTTATGCCGTTAGCTTCTACTTGTTTATCATTTACAGCTCACAGACTTTTTTTTTTTTTTTTTGCAA-----------------GGTTTGTTTCTTTAACTGTGAAGTAGTCAG--TTTTATGTAATTATGTAGTCCTATGTTTCC--------TTAGAAAACTAGGACACAGATTTCCCGGGAGGAATTAGCAAATAATTAAAGTCTTGAGGAAAAGAAAACAACAATGAAGCATCAGCCAACAGGGTTACAAGTCT ...x.:x.:...xx.:.:...:..::x..xx...x.:..x::....xx....xxx..:-..:x:..x:..:x..:x.:.x.x...-----------------:....:.x.:.x....::....:..xx..:--..x...........:x.x.--...:.....--------..x.............x.:x...:..:.:.......xx..:..........:x..:.:.-------.x:x.:.x.xx.::..:x.....x.:.:.x...:.... 58M1I26M17D30M2D19M2I9M8D59M7I38M 156/239 65.3% 249/94230402 0.0% 37/239 15.5% 10902919 NA +8400 chr4 + 190214555 59983884 59983883 59984248 365 TGTTTTCCTTGTGTTATTACTGCTTCCACCCATGAA--TAGAACTATTATGTGTTTTGAATAATTTAAAAAGATGTGTTGCTTGTTGATTTTGGATTTATTTTCCTGACATATTGAATAAAATATT-CAGTGAGTGAATGACATATGGCCTTTCTTCACTGAAATATGGCAAATATGTCTTTTTCCTGGTGCACAGATCTTGTTTTCTACCAGTTTTATAAGCTATGCAGGGTGAGTGAATTCAATAAAAGATTGTTAAAGACTTACAAATAACATACAT--TCAATGATTGTGTTCTGCAACAAAGTAAATTTAGACTCGTGGATAATAAATATTTATGAAGATGAAAACCTTTTCAGAATTCTAAATT chr4 + 94230402 49064404 49064403 49064752 49064404 49064403 49064752 349 TATTCTTCTTATGTTGTCTTTATCATCACCAAGGAGATCTGAACAATC--------TGAATAATT-AAAAAGTTCTCTAAAACATTTACTTTTTGTTTGTTTGCCTGATCTACTGAAGAGGAGGTTGAAGAGAATGAATAGCATATGCCATCCTTTCACTTAGCAGCGGTCTGTGCAGCTTCTTCCTG-CGCAGGGAGTTTGCTTT----------TGTATACCCTGCAGGATAGGTGT-TTCAAGGGTTGGATGCATGGGATTTATAAATCACACACAGAGTCAGTGATTGTCTTCTGTACCAAAGTGAATCTTGTACAATCTAAAATAAATATTTATGAAGATGAAAACTTTTCTGGAATTTGAAATT .:..:.:...:....:.:x:.:::x:....x.x..:--:x....x..:--------.........-......x.x.x.x:xx::..x.:...xx:...:...x.....:x..:....x.::.x:..-x..x..:.....::......x.x.:::......x.:xx::..:xx:.:::x...:......-:...x:..x:...:...----------.:..x:.:x......:.::...x-.....x::xx.:x..:xx::..:...:....x...:...x--...:.......x.....:.x......:...:.x.xx:x:.xx.x.........................:...:::.....:x..... 36M2I10M8D9M1D60M1I61M1D17M10D23M1D40M2I88M 222/344 64.5% 349/94230402 0.0% 26/344 7.6% 10919480 NA +3039 chr4 + 190214555 59995985 59995984 59996017 33 AAAAAAAAAAAAAAAAAAAGGATTTTTATTGCA chr4 + 94230402 80601101 80601100 80601133 80601101 80601100 80601133 33 AAAAAAAAAAAAAAAAAAAGGATTTTTATTGCA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -20605116 -73625286 +18777 chr4 + 190214555 60000810 60000809 60001315 506 AATATCACTTTTTGATATGTGTCCTGCTAGCAAGTACAAATATTAAA---TTTAAGAG--------CATTGAACA-----TTTTCAAGATGTAGTTCACAGTTTATAAACCATTAGTTCATTATCATTCAATTCCCTCATTCCTTAAATTCTTCTGCTGTCTCCTGACTGACCATTTTCTGCTTCTGTAATTATTTGATTCTTTCCATCTAGTCTTAGATCAGTTAT---GCTTTGACCTTCATAATTCTTCTC---AGAAATATATGGCACCACCAAGTTTTCCTTTTCTTTAAATCTCTGTTTTACCTTGAGACAGATGTGCATGTGCATACATAATACATTTT-GGACTAACGTTCCTTGATAGCTTTTTTTTCTTACTGCTCAATAACGTTATACTGCTCTATTTTACAGGAAGCAGAAAATTTTATGAGTTCAATTTAGTTTGCATTCCAAAGCAGTAAGTAAAACTGTGAATTTGCTCCATTTGCTTACAAATAAGCAATTTATGGCTTGAGTGAACTCTTTT chr4 + 94230402 49067481 49067480 49068002 49067481 49067480 49068002 522 AACTTTGCTATCCAAGGTGTATCCTTC-AGCAGGTGCCAGAATTACAGTCTTTTAGAGACTGAAATCATTGCAAACCCATTCTTCGATGTGTAATTTGGAGTTCATAAACCATGGGTTCATTTGCATTCAGATACTGTGTTCCTTATGTTCTAAGGCTGTCTTCTGACCTACTGTTTTCTGCTACT-TGTTTACTCCTTATTTTCTCCCTGCTTTCACTCCAGTTGTTTCATTTTGACCTTCAGTGTTTTTTTCTCCAAAAATATACAGC--TGTCTACTTACCTTTGCCATTAAATTCCTGTTGTACCTTAAGACAGATACTCATATGCATATGTAATGCATTCTAGGGCTGAAGTTCCTACATGG---TTTATACTCACAGCTCAATAGCGTTACAGAGCTCTATTTTACAGGGTGCCGACAACTTTATGAGTTTGCTTTAGTTTGTATTCCAAGGCAGTTGCTTAAACTGTGAATTTGCCTTGTTTGCTTACAAATAAGCAATTTATATTGTAAATGAACCTTTTT ..:x.::..x.:::.x:...:....x.-....:..:.x.:x....x.---...x....--------.....x.x.-----.:...:.x:....:..::x....:.........x:.......xx......:x.x.:x::.......x:....xxx.......:.....:x..::.........x..-.:x...:.:xx.x:....:x:..:x.:.:.xx:.....:.---::...........xx:..:..:..---.:.......::..--:::.x.x..x:.:..x:.x......::.....x......:........::x...:......::....:....:.-..:..:.x......xx..:.---...x.x..:..x........:.....:.xx...............:x..x..x..:..........::x.........:.......:.....x:x.x...............::::........................:x:x.:.:.....::.... 27M1D19M3I8M8I9M5I106M1D40M3I24M3I13M2D74M1I20M3D159M 355/499 71.1% 522/94230402 0.0% 30/499 6.0% 10933329 NA +3103 chr4 + 190214555 60004591 60004590 60004698 108 AAAACAGAACTACCAATTTCATTACTGGAT-TATATATATATATATATACACACACACACACACACACACACACGCACACACACACACACACACATATATATATATATT chr4 + 94230402 54005662 54005661 54005768 54005662 54005661 54005768 107 AATGCAGAATCAACAAATTA--TATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATT ..x:.....::.x...x..x--..:..:.:-:....:...x..........:.............x.x.:x:::x.xxx::....x.x.xx:......:....x:.... 20M2D8M1I78M 71/106 67.0% 107/94230402 0.0% 3/106 2.8% 5998929 NA +3160 chr4 + 190214555 60004607 60004606 60004680 74 TTTCATTACTGGATTATATATATATATATATACACACACACACACACACACACACACGCACACACACACACACA chr4 + 94230402 46140836 46140835 46140906 46140836 46140835 46140906 71 TTACACTATTATTTTGTGTA---ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ..x..:..:.:xx..:.:..---................x.x....:........::.:.:.:...x..x:... 20M3D51M 52/71 73.2% 71/94230402 0.0% 3/71 4.2% 13863771 NA +3141 chr4 + 190214555 60012341 60012340 60012402 62 GGGACACAGTAGGTGCTCAGTAAATTTTTTTTTTTTTGAGACCCAGTCTTGCTCTGTCGCCC chr4 + 94230402 40902796 40902795 40902857 40902796 40902795 40902857 62 GGAACACAGTAAGTTCTCTGTTAATTTTTTTTTTTTTGAAGCATTGTCCTGATTTCTTTCCC ..:........:..x...x..x.................::.x:x...:..x.:.x.:x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 19109545 NA +3247 chr4 + 190214555 60022506 60022505 60022589 84 ATATAGTGGCAGGCAACTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:.....:--...xx....:.:............:........x.xx.x...x::........::.:..x.xx:.x:..:.. 10M2D72M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% -16010690 -78219712 +3194 chr4 + 190214555 60040559 60040558 60040633 75 AAGCTGGTACCTAACTTGCAAGACAAAGTCCTTTTTAATTTTTTCTCTGCTTTTTCCAAACAGAAGGAATCTTTC chr4 + 94230402 79478985 79478984 79479059 79478985 79478984 79479059 75 AAGCCAGCATCTTTCTTGGAAGGAAAAGCCCTTTTTATTCTTTTCTCCTTTTATTAAAAAAAAAAGAAGTCTGTC ....::.:.:..xx....x...:x....:........x.:.......:x:..x..xx...x.:...:.:...x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -19438426 -74791976 +3115 chr4 + 190214555 60045793 60045792 60045925 133 GTTTCATGGCTACAATTCTTTGTCCTGACAGTTTTTATAATAGTAATTAGCAAATTTATTGCAAAATAAGAA-AATGATTATTAACACAAAAAAGTTCAGTAAAGGACAATTATGTAAAGCAGTATGATTTTCT chr4 + 94230402 85086552 85086551 85086676 85086552 85086551 85086676 125 GCTTCATAACTAGA--------TTCTGAATGGCTTT-TAAAAGTACAAGACAACCCTCATTCTGAGTAAAAATCATGATTATTAGCATAAAAAAATTCATTAAGACATACCTATATAAAGTAGAATATTTTTTT .:.....::...x.--------.:....xx.x:...-...x....xxx::...x::.xx.x.x:.:...:..-x..........:..:......:....x...::x.:.x:...:.....:..x..:x....:. 14M8D14M1D35M1I61M 82/124 66.1% 125/94230402 0.0% 10/124 8.1% -25040759 -69189643 +3313 chr4 + 190214555 60066064 60066063 60066152 89 TGAAATGAGTGTGAATTAGGTTTTTGTTTTCTTTAATTTTTCTTTTTTTGTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTCTTTTT chr4 + 94230402 58577631 58577630 58577718 58577631 58577630 58577718 88 TGAAATAAGGGC-ACCTAATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT ......:..x.:-.x:..:x:....x.....:::.x:x.x.:..:x....:...:x.x.....:....:..........x...x..... 12M1D76M 61/88 69.3% 88/94230402 0.0% 1/88 1.1% 1488433 NA +3755 chr4 + 190214555 60072189 60072188 60072257 69 CATGGTGGCGCATGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCTCTTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::....:...:.--......:...........::........x.:x.x...x.x...........:. 14M2D53M 53/67 79.1% 67/94230402 0.0% 2/67 3.0% -15961008 -78269394 +3456 chr4 + 190214555 60078724 60078723 60078784 61 GTGCACCTGCAGTTCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCTCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x..:...............::........x:xx.x...x.x........::.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -15954480 -78275922 +3100 chr4 + 190214555 60078831 60078830 60078902 72 GCAATGGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAATACAACCAC--TCATCATACTGCCC chr4 + 94230402 88382708 88382707 88382781 88382708 88382707 88382781 74 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACAGCTC ....x....::....xx:x.........::.:..............:x...x..x...--.x.:..:..x..:. 58M2I14M 53/72 73.6% 74/94230402 0.0% 2/72 2.8% -28303877 -65926525 +3542 chr4 + 190214555 60083969 60083968 60084088 120 AGAATATACATTCTTCTCAGCACCACATAGCACTTATTCTAAAATCGACCAC-ATAATTGGAAGTAAAACACTGCTCAGTAAATGGAAAAAAAAAAAAAAACAAACAAACAAACAAAAAAC chr4 + 94230402 42317736 42317735 42317839 42317736 42317735 42317839 104 AGAATACAAACTCTTTTGAAAAC-----------TGTTTTAAAATAGATAGCCATCATTATGAATATGACAATCC------AATGAAAAAAAAAAAAGATACAAACCAACAAACAAAAAAC ......:.x.:....:.x.:x..-----------.:..:......x..:x:.-..x...:x:.:..x:...x.x.------....:...........:.x......x.............. 23M11D18M1I22M6D40M 77/103 74.8% 104/94230402 0.0% 18/103 17.5% 17766233 NA +18762 chr4 + 190214555 60089017 60089016 60089487 471 AGCTCATTCTTGCA-TATTCATAGGCTGTGATGTACTTCTCAC-----TCTCTTTTCTATTCCTGGTCTCTGGGATTTTTTTTTTTA--------------ATGTATAAAA------GGAACAGCATGACCCCATCTTAAAAAATTAAAATATTCACTCATCTGTGGTTATTCCTGTAATATCACTAGTGTTGGTGAATAATTCAAATTAAATAGTTCTCTATATA--------TTCAAT----------TTTAAAAACA-CTTCATTTACTTTCTTTCAATGGTTTCCTCCCGCACTGTTCTCACCCTGCGTTATTCATATGCAACCTCACAAATTGTTTTGAGTTCAAGCAGTGCTGATATAAATCACAGGGCTATTTTCTCTGGAGAACTTCAGCCTTAAGCTCCACAACTTGTTTTAAAATGAAAACTATGCTCAATTAAGGTGATTTGTTTTC--CTCAAAAAATTAACTATCATATATTGCCATTTGCTACAAGAGAAGACTGAAGTTACAT chr4 + 94230402 49089727 49089726 49090237 49089727 49089726 49090237 511 AGCTTGATATTGCACTTTTCATAGTTTGTGCATCATTTCTTGCATTAGTGTGTTTCCTTTGCATATTCATAGGCATTTATGTGTTTGGGGGAGGCAGGGATATTTATGGAATTGATGGTAACAATGTTGTCCCA------GGAAATGAAATAATTACTGATCTGAGGTGGTTC-TGCAGTATCATCAGTACTGGTAAATAATTAAAATTACTTTCTTCTGTACATAACCCTTTCTTCTATGCATAACTAGTTTAAAGGCAACTTCATTTACTTTCTTTCAGTGGTTTCATCCTGTACTGTTCTTACCCTGCATTATTCATGCACAACCTTGCAAATTGCTTCTACTTCTAACAGTACTCATATAAATCATAGGGTCTTTTTCTCTGGAGGACTTCAGCCTTAAGCTCCCCAGCTTGTTTTCAAATGAAAACCATGTTCAATTAAGATGATTTGTTTGCTGCACAAAAATTTAAGTATCTCATACTGTCATTTATAGTGAAGGAAAACTGAGATAATAT ....::x.x.....-.x.......x:....xxx:.:....::.-----.x.x...:..x.x.x.:x..x:x..x....x.x.x...:--------------..x...::..------.x....:::.x::....------::..x.:.....x.:...x.....x...x:...-..:.:.....::...::....:.......x......xx.xx....x..:...--------...x..----------......::..-...................:.......x...:.:........:.......:........:::......::.......:..:x.x...x.:....:..x..........:....::x............:..................x..:........x..........:...:.........:..........x.--.x......x....x....x:...:..:.....::x:::.::...:.....::.x.:.. 14M1I28M5I39M14I10M6I17M6D33M1D52M8I6M10I10M1I197M2I58M 346/464 74.6% 511/94230402 0.0% 54/464 11.6% 10999290 NA +3463 chr4 + 190214555 60122495 60122494 60122604 110 TTATATATGATATATATTACATACAGGTATTTATATTATATATGAGATATATTATATATAGGTATATATATTATATATGAGATATATTATATATAGGTATATATAATATA chr4 + 94230402 46018829 46018828 46018938 46018829 46018828 46018938 110 TCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATA .:...x..x:.....:x..:..:.x.xx..x...:x..x.....:x.....x......x.:.xxx.....:x:..:..:::........xx::..x.....x...xx... 110M 72/110 65.5% 110/94230402 0.0% 0/110 0.0% 14103666 NA +3656 chr4 + 190214555 60122836 60122835 60122952 117 TGTATGTGTTATATATACATATATGTTAACATATATGTATATATACATGTATACATGTATACATATAT-ACAGGTATATACATGTATACGTATATACATGTATATGTATATACATGTA chr4 + 94230402 56938574 56938573 56938690 56938574 56938573 56938690 117 TGTTTGCACCACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATAACAGATAC-TGTATTCATTATTCTGTACATGCAGATGTATATGCATATA ...x..::::.:.:...x......xxx..:...x...x......:.x.x....::.:.x:.x......-....:..:-.::..x:..xxx.x.:......:.x........:...:.. 68M1I8M1D40M 78/116 67.2% 117/94230402 0.0% 2/116 1.7% 3184262 NA +3111 chr4 + 190214555 60123951 60123950 60123990 40 AAAAAAAAAAAAAAAAGCAGTCTGGCAGTGACTTATAAAG chr4 + 94230402 82403008 82403007 82403047 82403008 82403007 82403047 40 AAAAAGAAAAGAAAAAGCAGTCTGACAGTAACTTATAGAG .....:....:.............:....:.......:.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -22279057 -71951345 +3264 chr4 + 190214555 60170018 60170017 60170100 83 CAGTCCACAGTC--CGGCCTGGGCGACA---GAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAATAGTAACATAAAAA chr4 + 94230402 88382683 88382682 88382770 88382683 88382682 88382770 88 CAGACCATGGTCATTAAACTGAGCAGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ...x...::...--:::x...:..::..---....:....xx.x.........::.:..............:x....x.:..:..x.. 12M2I14M3I57M 60/83 72.3% 88/94230402 0.0% 5/83 6.0% -28212665 -66017737 +3248 chr4 + 190214555 60179597 60179596 60179693 97 CCACTGAATATGTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTTTACAGAAAATAAATGGAAGTATGTTCTTAATAAACAAAGAGATTTT chr4 + 94230402 30153643 30153642 30153728 30153643 30153642 30153728 86 CTATTCATTACGTGGGTTGATTGTGTGTGTGTGTGTGTGTTCATAATTCTTCATAAAAAATAACTG-----------CTAATAATCAAGAAAAGTTT .:.:.x.x..:.....x..xx...................x::.:xx:...:.:.:.......x..-----------:......x...::.:.x... 66M11D20M 61/86 70.9% 86/94230402 0.0% 11/86 12.8% 30025954 NA +7733 chr4 + 190214555 60195451 60195450 60195818 368 ACGACAGATCAACAAGCAAAGATAAACACAAAAATGATACAAGACAGAGTGTTTCTGTTCACTATCCTTCAAGTAG-TTTCAGATTTAGTTTACTTCTAGGCATCCAAGCTTCTGAGCTATCACCACAAATATCTAAATTGCTTTCTCTCGGGTTCTACAAAGCACT---------CTCTTTACTTTATCTACTCATTT---------TAGATGGCACCTCATTGAATTTCTCCTAGCCAATTTGCTTTCTACAA------AGCTCACATTTCTCTTACAATGGAGAAATTTCTTTAGCTCTACTCTTTCAACTTTAGCTTAATAGCATGAGAGCTTT---------CTTTAAGTTTCACTGTCAGCAGAATAGCACAAATTTAACATTTATGTGATCCATT chr4 + 94230402 49114941 49114940 49115317 49114941 49114940 49115317 377 ATGACAGAAGGAGAAAGCAAGATAAACATAAAA-TGTTACAAGCAAGTCTCTTCTAGTACAATTTCTTTAAAGTAGACTGCTGATTTAGACTATTTGCAGACAACTAGGTATTGAGGCTATCAACACAAATATCTTAATTACTTTCCCACAGCTTTTATAAGCCACTGCTTCTACAtttttttctttttcttttttttttttttttAATTGAAGATGTCTTGTTGAATCTTTCCTAACCAATTTAATTTCTACCAGTTTGGAATTCTCAATTCT-------GAAAGAAACCCCATTTCCTATAATTGCTTTGCATTAGTCCAGTA-------AGCTTTTTGTTCTTGCTTCAGTTATTACTGT---ATGAGTAGC-------TCACATCTGTGTGGTCCATT .:......xx:.x..:xx..........:....-..x......xx..xx.x..::x..x..x.x..:..x......-:.x.x.......x:..:..x:..:..x.:.:.:x.:x::.......x...........x....:.....:.x.:.x..:..:..:x....---------:.:...x....x...x:.:x...---------.x..x.::::..::......:.:.....:.......:x.......x.------.::..x..x....-------x::.....:::.x..xx..x..x.:x:.:x:.x....:::.:..-------......---------...:.:x.x.:.....---xx..:....-------.x....:.:....:...... 33M1D42M1I90M9I23M9I47M6I13M7D44M7D6M9I16M3D9M7D20M 231/343 67.3% 377/94230402 0.0% 59/343 17.2% 11080510 NA +3649 chr4 + 190214555 60205648 60205647 60205718 71 ATACAGTGGTGGGCGCCTGTATTCCCAGCTACTTGGAAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.........x:..--....x.:...........:.........x.xx.x...x.:........::.:.. 15M2D54M 54/69 78.3% 69/94230402 0.0% 2/69 2.9% -15827548 -78402854 +3322 chr4 + 190214555 60210318 60210317 60210389 72 GCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.::..........::........x.xx.x...x::........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -15822888 -78407514 +3364 chr4 + 190214555 60220810 60220809 60220872 63 CGTAAGACAGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325494 27325493 27325556 27325494 27325493 27325556 63 CGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ....x..:x.....:.:x.:x.:x..x..............:.........::..::...... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 32895316 NA +3128 chr4 + 190214555 60220820 60220819 60220875 56 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATG chr4 + 94230402 27325502 27325501 27325557 27325502 27325501 27325557 56 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG .:....:.:x.:x.:x..x..:...........:.........::...:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 32895318 NA +3527 chr4 + 190214555 60220824 60220823 60220906 83 TATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:.:.x.:...............:.xx:...:x.:...:.......x...::.:.x....:::.:..::.:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -25613709 -68616693 +3847 chr4 + 190214555 60220832 60220831 60220961 130 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATA----TATGTATATATGTATATATGTGTATGTATATGTGTATATA-TGTATGTATATGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:..:.....x.x....x.:..:.x.:.:....:x:.:..:..:x::....:x...::....:.::x:..:----.:.......:.....:x..:..:...:.:.:.x.xx..:.-.x.x...:x:....:. 74M4I40M1I16M 82/130 63.1% 135/94230402 0.0% 5/130 3.8% 39111638 NA +3892 chr4 + 190214555 60220834 60220833 60220973 140 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATATGTGTATGTATATGTGTATATATGTATGTATATGTATATATGTGTATATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACC----TATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....:........x.x....x.:..:.x.:.:.:..:x:.::....:x:..:..:x----....:....:..:x::.::x.x...:............x.....::.::.:.:.x:xx..:.-..x.x.:..x..:..:. 56M4D62M1D17M 85/135 63.0% 135/94230402 0.0% 5/135 3.7% 39111640 NA +3587 chr4 + 190214555 60220836 60220835 60220914 79 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT----GTATATATGTATATATGTGTATATGTATATATATGTATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x...................xx..:.----:..:.......x...::...x....:.:.:...:::.:.. 39M4I40M 58/79 73.4% 83/94230402 0.0% 4/79 5.1% -25613697 -68616705 +3611 chr4 + 190214555 60220838 60220837 60220925 88 TATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATG----TAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x::.x.....x...............:...xx...----..x.:...:..:....x..::..:.x....:.:.:..::.:.:... 38M4D46M 60/84 71.4% 84/94230402 0.0% 4/84 4.8% -25613695 -68616707 +3490 chr4 + 190214555 60220841 60220840 60220990 150 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGT-ATATATGTATATATGTGTA---TGTATATGTGTATATATGTATGTATATGTATATATGTGTA-TATATGTATATATATGTGTAT chr4 + 94230402 79265519 79265518 79265673 79265519 79265518 79265673 155 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTAT .............::........xx.:......::..:.::...::.:.:.::x.:..:.x.:.:.x:::-.:.:x.x......x:..:.---..:x.x.x..x:.:..::x...:..x.x.:..x:..:x:.-:.:x.....x....::.x... 70M1I19M3I40M1I21M 91/150 60.7% 155/94230402 0.0% 5/150 3.3% -19044678 -75185724 +4071 chr4 + 190214555 60220842 60220841 60220949 108 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATATGTGTATGTATATGTGTATATATGTA chr4 + 94230402 21109194 21109193 21109299 21109194 21109193 21109299 106 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACC--TATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA .:.:::.......x.x....x.:....x........:x:.::....:x:.....:x--....::......:x:...:x.x.:...:.....:....x:...::...:. 56M2D50M 71/106 67.0% 106/94230402 0.0% 2/106 1.9% 39111648 NA +3504 chr4 + 190214555 60220843 60220842 60221007 165 GTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATATGTGTATGTATATGTGTATATATGTATGTATATGTATATATGTGTATATATGTATATATATGTGTATATATGTATATATATGTA chr4 + 94230402 79265519 79265518 79265678 79265519 79265518 79265678 160 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC-TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA---GCACTTGTATTTATACATTTATGAGTA .............::........xx.:.....::...:.:..:.::.:::.:.x.::...x.:.:.x:.:.-.:::x.x...:.:x...:.:-.x..:x.x.x..x:....:.x:.::..x.x....x:.::x:.---::.:x.....x...::..x...:x... 71M1D20M1D42M3D27M 95/160 59.4% 160/94230402 0.0% 5/160 3.1% -19044676 -75185726 +3606 chr4 + 190214555 60220845 60220844 60220986 142 GTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATA------TATGTGTATGTATATGTGTATATATGTATGTATATGTATATAT-GTGTATATATGTATATATATGT chr4 + 94230402 89812946 89812945 89813085 89812946 89812945 89813085 140 GTTTATATGTTAGTGTTTGTG---------GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGT ..x.:.:...xx....x....---------.:.....x:..x............x..x..::x.xx...:....::.------:...:......x:x.....:.:.:.....:...:.x..x..x.-:x..x.x....x.:.x::.... 21M9D47M6I43M1I22M 91/133 68.4% 140/94230402 0.0% 16/133 12.0% -29592101 -64638301 +3118 chr4 + 190214555 60220856 60220855 60220915 60 TGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATA chr4 + 94230402 56867300 56867299 56867359 56867300 56867299 56867359 60 TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTA ........x:..:...:.::....:.:xx......x...::.........:.x....:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 3353556 NA +3180 chr4 + 190214555 60220857 60220856 60221002 146 GTGTGTGTGTATATATATGTATATATGTA-TATATGTGTATATGTATATATATGTATATATGTATATATGTGTATGTATATGTGTATATATGTATGTATATGTATATATGTGTATATATGTATATATATGTGTATATATGTATATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.x....:x....:x.:.:.xxx.:.-.::.x....::x::.:x::.::::.x::.:...::::.x....x..:.:.::::.x..::......:..x..:..:.:....:::.x.:..:.:.:.:::..:.x..:...::.:.. 29M1I117M 77/146 52.7% 147/94230402 0.0% 1/146 0.7% 55006682 NA +3459 chr4 + 190214555 60220891 60220890 60221002 112 GTGTATATGTATATATATGT---ATATATGTATATATGTGTATGTATATGTGTATATATGTATGTATATGTATATATGTGTATATATGTATATATATGTGTATATATGTATATAT chr4 + 94230402 89812946 89812945 89813060 89812946 89812945 89813060 115 GTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..x.......xx:.:.x...---.....x:..x..........:.x..x:..:x.xx..::....::.x::x:x:...:....:.x:x.:.:.:.:.............x..x.. 20M3I92M 73/112 65.2% 115/94230402 0.0% 3/112 2.7% -29592055 -64638347 +3243 chr4 + 190214555 60221043 60221042 60221111 69 ATGTGTGTATATATGTATGTATATGTGTATATATATGTATGTATATGTGTATATATATGTATATATATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.:..:::.::...x........x.:....:...::...:...:.::..x.:....:..x.:.... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -26412880 -67817522 +3096 chr4 + 190214555 60281229 60281228 60281298 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -15751968 -78478434 +12837 chr4 + 190214555 60283617 60283616 60284004 388 GCCCATTTTTCTT----TCTCTGAACTACTTAAAATTGAGTTAAGACAAGCAAATTTAGTTAACTGTCCTTAACATCTAAATAAGAA-------ATCCCTATTCTAATTCAATGT----TGCTGGTTGGCA--CAGTATTTGTTTAGTGACTGACAGCTCCAAATCATATTACTCTGTAAAACTTT--TACTTTGAAATGTTTCTCAAGATGGTTTATGTTAATCCCATTATAATGGACTACAATCAAGCAACTGCAATGGTAGTAATTTTCACTGCTTTTATTGAAATTGTAGATAGATGAAC-TGAATCCAAAAC---CTACTCCAAATA-AAACAGCTCTCTACTCCTATGTTCTTGATAACAATAAATGTTAAATTATCTTCTATAAAAGGCTAACATAGTAAAATTA chr4 + 94230402 49136465 49136464 49136873 49136465 49136464 49136873 409 GTCCTGTTTTCTTGGCTTCTCTCAGATCAGTAGGAGTGCATTGAGACAAATGCATTCAGTTGGCTG--CTTCCAGTCAGAGCATGGGCATGTTTATCTCTGTATTAACACAGGGTGTCATGTTAATCTTCAAGTAGTTTTTCCTCAGATAGTGATAGCTTCAAATCAGATTATTGTATAAAAATGTACTGCTTTGAAATGCTTCTTTAGATGTTTTATGTTAATTCCATTATAATAGGCCACAATCAGGCAATTGTGACGGTAGTAATTTTCACTGCTTTTATAGAAATTGAAGATAGCTTGGCGTGTGCCCAGAAAATGCTTCTTCAAACACAAACAGCCATCAGCTCTTATATTGTTGGTAACCGTAAATATTCTACAGCCTTCTA-AAAAGTGTAAAAGAGCAAAATTA .:..xx.......----.....x.:x.xxx..::.x..x:..:......:::x...:....::...--...xxx:..x:.::.x.::-------...:..:.x:...:x..:x..----..:.::.:xx..--:...x...x:.:..xx.x...:....:.......x....:.x.:.....x.x.--.:..........:....:x.....x...........:..........:.:.:.......:....:..::.:........................x.......x......x.x::.-..x::...:..x---..x..:....:.-.......:x..x:...:...:..x...:....x:.....:..xx.:x::......-.....xx...x.x..:....... 13M4I49M2D19M7I21M4I12M2I53M2I116M1I12M3I12M1I55M1D23M 272/385 70.6% 409/94230402 0.0% 27/385 7.0% 11147152 NA +3482 chr4 + 190214555 60331379 60331378 60331422 44 AGTTCTCTCTCTCGCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248045 75248044 75248088 75248045 75248044 75248088 44 AATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:.:..::.....x.............................. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -14916666 -79313736 +3148 chr4 + 190214555 60331385 60331384 60331424 40 CTCTCTCGCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...x.............x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -14916664 -79313738 +3111 chr4 + 190214555 60331387 60331386 60331422 36 CTCTCGCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .....x...................:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 47730083 NA +3127 chr4 + 190214555 60338268 60338267 60338324 57 TTTTTTTCTTTTTACTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 5672105 5672104 5672161 5672105 5672104 5672161 57 TTTTGTTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGA ....x..:.:..xx.::.:.:.:.x.:..................x.:......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 54666163 NA +3001 chr4 + 190214555 60338272 60338271 60338311 40 TTTCTTTTTACTTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 45847278 45847277 45847317 45847278 45847277 45847317 40 TTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..x.:.....::...........:................ 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 14490994 NA +3614 chr4 + 190214555 60358131 60358130 60358216 86 TCAGCTAATTTTCTTTTATTTTTTCTTTTCTTTTCTTTTCT-----TTCTTCTTTCTTTCTTTCTTCTTTTTCTTTTCTTTCTCTTTCTTT chr4 + 94230402 64726495 64726494 64726585 64726495 64726494 64726585 91 TCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ..x...x:..x..x...:.x..::x...:::..:.....x.-----..:..:..:......:x.......:.......:...:..:.:... 41M5I45M 61/86 70.9% 91/94230402 0.0% 5/86 5.8% -4368364 -89862038 +3134 chr4 + 190214555 60358143 60358142 60358201 59 CTTTTATTTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTCTTCTTTTTCTTT chr4 + 94230402 42359333 42359332 42359391 42359333 42359332 42359391 59 CTTCTTTTCCCTCTTCTCTGTTATTTTCTTTCTTCTTTTTTTCATTCAGCTTTTTTGTT ...:.x..:::....:...x..x...............:....x...xx......:x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 17998810 NA +3115 chr4 + 190214555 60358150 60358149 60358241 92 TTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTCTTCTTTTTCTTTTCTTTCTCTTTCTTTTTTTCTTCTCTCTCTCTTTCTTTCC chr4 + 94230402 89201232 89201231 89201318 89201232 89201231 89201318 87 TTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTT-----TTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCC ...........:...:...:....xxx..x.x:..-----.....x..xx::...:..:....:......:x.x.:..::..:::.x.:... 35M5D52M 59/87 67.8% 87/94230402 0.0% 5/87 5.7% -28843082 -65387320 +3183 chr4 + 190214555 60358150 60358149 60358219 70 TTTTTCTTTTCTTTTCT-TTTCTTTCTTCTTTCTTTCTTTCTTCTTTTTCTTTTCTTTCTCTTTCTTTTTT chr4 + 94230402 87898158 87898157 87898228 87898158 87898157 87898228 71 TTTTAATTTTCATTTCTGTCTCATGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTT ....xx.....x.....-.:..x.x..x.x.....x..x.::.x..............:.....::..... 17M1I53M 54/70 77.1% 71/94230402 0.0% 1/70 1.4% -27540008 -66690394 +4175 chr4 + 190214555 60358150 60358149 60358295 146 TTTTTCTTTTCTTTTCTTTTCTTTCTTCTTT----------CTTTCTTTCTTCTTTTTCTTTTCTTTCTCTTTCTTTTTTTCTTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTTTCCTTTTCTTTCTTTCTTTCATA chr4 + 94230402 50176266 50176265 50176418 50176266 50176265 50176418 153 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTG---TCTCCTTCTTTTCTTTCTCCTCCATTCTTCACA ....::x.:..x:.x..:.:........:..----------....:x:x:.x:.:.....x......x.x..:x.....x......:...:....:xxxx..:x...:..:x::.....x---....::.....:....::::..:x.::....:. 31M10I79M3D33M 92/143 64.3% 153/94230402 0.0% 13/143 9.1% 10181884 NA +3555 chr4 + 190214555 60359005 60359004 60359077 73 TGCGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........:.:.........x.xx:x...x..........::.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -15674200 -78556202 +3060 chr4 + 190214555 60361308 60361307 60361360 53 GTGAGAAAAAAAAAAAAAAAAAAAAAAACAGAAAAACCTTAAGTCTAAAACTG chr4 + 94230402 49702571 49702570 49702623 49702571 49702570 49702623 53 GTGGGGAAAAAAAAAAAAAAAAAGAGGACAAAACAACCTCTATCCTGAAGCTG ...:.:.................:.::...:..x.....:x.x:..:..:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 10658737 NA +28642 chr4 + 190214555 60366074 60366073 60367002 929 GAATGATGAGGGAAGCAGATGGCATAATCATTTATTAAAAAATCAGCCACTTTCTCATATATTTGAT--AGCTCTTTCTTCATTCTTTGGGATTTGCATTTTAAATGATTAAGGATACAGTAAGACAGCATGAAACCTCATTAACAAAGATATATCTTCCGGCCTCTACCTGAAGGGAAAGTGGTGA----TTTTTCCACCTCATAGCCCTCAGTTTAAATACCTGCTGATTTGTTTTATCTCTACTTACTTCAAAGTATTTCAGCCACATTAATGCAGCTTTTAACTATAGAAAAT--------CAAGCATTTAGCTATATCCTAAAACA-----AACCAGAACATTTTTCATTTATGAAGTTTCTATTGTCTA--TGGCAATATGTAATATATGAGGTTAACCAAGTGCTTCCCTT-GATGC-TAACATAAGAGAGGA----------TAAACACATCTCTATGATTTTTGAAGTTAATTATGAGAACTAC--ATAGCAGATTTGGTT------TTAAACAGATGTGGTG----TCTTTACTGCTTTGATGTAAGATACT-ATAGCAATAGTGGTGGTAGACAGTATACATTCTCACTGTACATATAACAAAGCAATGTAATAATTAAGGTTTAATCAGAGCACTCTCCTGTGGCTTTCCCAATGACTGTTGAGGCAATAATGACATTATAGATTAGATAGCAAATTGCAACAAAGTTAGGCAACAGCATCATAAAAAAGCAATATTGATGTATAAAAAAATTAGGTAAACTTAGTCAATGAAGCATAACACCTTATTCATATTAACCTCCAGCAGGGCCCTCGCAGTCCCAGGCACTGATCCAATCATTTGCTTGCCTAAGTATTTTCCA--CCTTCTATGCAT---CACTTAC-TTCTTCTCTCTAACACCCA-CTCTGTTCT--------ATAGCAATGCT---TTGTGTTCTCTCTTTTACAAGGTAAATACTGAGAAAAAGAAGTG chr4 + 94230402 49152409 49152408 49153384 49152409 49152408 49153384 976 GAGAGATAAAAGAAGCAGATGGCATGTTCTTTTATTAAAAGCCAACCCACTCCTTC---TATTTGCTGCACCTCTTTGTGCCTTTGTTAGGATTTACATTTTAAATGATCAGGGATCTAATAAGCCAGCATGGCACCTCATTATTAAGGAGATATCTTCAAGTCTTTACCTAAAGAGAGAGTTGTGGGGTTTTTTTCTACTTCATATCCGTCTATTTAAGAGCATGCTGGCTTGCTTTATCTCTGCTTGCTTCACAATTTGT-------GTGAACACAGCCTTCAACTTGACAAAATGCAAACTCAAAACTTTCAGCTG-ACTCTAAGCAATGTGTAGCTAGGAAGATAGGGATTTACAGAGCTCTTGCTTGCTCATTGGAAGTGTTTAAT-TA-GCTGTTAACCAAATATCTCCTTTTGATGCATGGGACCAGGAAGGAGGGAGGAAGGCAAATAAAGCTTTGT-AGACTTACAGCTTATTCTGGAAATCAGTGAAAACACATTTGGTTCTGATCTTAAACAGGTGTAATAGTGTTAGTTATGGCTCTAATGTGAGTTGCTGAGAGCAACAGGAAAGGCTAAGACTATAGATCCTCTCTGCAAAGATCA-GTTGCAGGGCAATAATTAAGGCATAATCAGAGCATCTTCCTTCTGCTTTATTAATCACCATTCAGCTAGTAATGGCTTTATAGATTAAATAGCAAGTTGGAACTAAGTTAGGCAACTGCAACATAAAAA--CAATACTGATGTTTAAAGAAATTATGTAAACTCAGTCAACGAAGCATAACATTTCATTCTTATTAGTATCCAGCAGAGATCTGATTGTTCCAGCCACTGATTCAGTCATTTGTTTGCCTAAGTATTTTTTGTTCCCTCTGTGCATTTCCAGTTACACCCTTCCCTTGAGCATTTACCTCCATCCTTGCAGGCATTCCCAAGGCTAACCCCTACTCCCTGTTCTTCATATTAGCTTCTGGGAGGAAAAGGTG ..:x...:.::..............:x..x..........:x:x.x.....:::..---......x.--.x......x.x.x..:x..:......:.............:.:....x:.:....x.......:x.........x:..:..x........x:.:..:.....:...:..:...x...:----......:..:.....x..x..x:.....:x:.x.....::...:.........:...:.....x.:.x.x.-------:.x..::....:..:....xx.x.....--------x..:.x..:....:-.::....:xx.-----.:.:..:.x:x.xxxx.....:::..:.::.::.xx..x--...x.:.:.x....-..-.xx.........:.:::...:..-.....-.::x.:x..::....----------:...:.x.x..:.:.-.xx:..:x..:.x...x..::..::.x--.x.:..x........------........:...::.:----.xx...:x...:.:....:..x.:..-.x.....:..x::x..:x:.x.x....x..:...x...:.x.x..x.-:xx...:x.:...........:x...........:::....x:x.....x::...x..::..x..x:.:.....:.x..........:.......:...x...x............x...x........--.....:......x....:......x.......:......:...........::.:....x.....::x........:.x:..x::x..:....x.......:..:.......:...............:::--..:...:.....---..x....-::....:..:x.:..:::.-...::.:..--------x.xx...x...---::x.::..:..x..:.x..x:x..:x.x...:..::..:.:... 56M3D8M2I118M4I71M7D28M8I14M1D11M5I39M2I14M1D2M1D23M1I5M1I15M10I15M1D27M2I15M6I16M4I26M1I47M1D129M2D131M2I12M3I7M1I19M1I9M8I11M3I44M 637/912 69.8% 976/94230402 0.0% 81/912 8.9% 11213665 NA +15429 chr4 + 190214555 60371366 60371365 60371768 403 TCTCCACTTCAAC---ATATTTATTTTCTTTTTTTCTCTCTTCTTCACTTCTGAAATAGAGAA----CATGTTAGAGGGAACAAAAAGTAGAGTGCATTTAGTACAGGAAAAATATTAATTGCTTGAAAATGCAAAGTGAGGAAAGAAATCAATTGTGAGTAAACAGCAC-GGAATGAAACCTCTTGACCTTGTCAGATGCTTTATGGGAGAGACCCTTCAATCAGAAATGTGCTGATGCTAAATTATCACAGGATTTGATCTATCTTTTAATAATTGAAAACTCCCACTCCTGGAAGAGAACCAGTTCTCTTAACAGCCACTAATTTTTCAGAGTGGAAATTTAGTACCTGAAACGATTGCAGATTTATCTACTAAGACTTGTATATATATTATATGGCACATCATATTC chr4 + 94230402 49154211 49154210 49154612 49154211 49154210 49154612 402 TCTCCTTTTCAACTGAGTATCAACCTTCTTGTATATTACTTTCCCTA-----GGAGGAAAGAAATTACACATAAGAAGAAAGAAAGAATGGCATTAAATTAGCAAATATATAATATTAATTATGGGAAAATGCAAAGCAAAGAGGAAAATCAACTGTGAGGAAACAGAATTAGAAAAGAACCTCTTAGCCTCATCAGATGCTTTGTGGGAGAAAGCCTTCAATCAGAAATGTGCTGATACTAAATTATCCCTGGATCCGATCTAGC-TCTAATAATTGAAAACTCCCACTGCTGGCACAGAACCAATTTGCTGAATGACCACTAA-TTTACAGACAGGATACTAAGTAGACAAAGCTGTTGCACA--TATCTAGTCAGACTTATGTTGTTATTCCTTGACACACTTTATCC .....x:......---:...:x.::.....x.x.x:.x::...:::.-----.:.:x.:....----..::.x...:.:..x...:.:.:.x:.xx.x....:.x.x:x.x..........::xx............::.:..:::.......:......x......x.:-:...x::........::...::...........:.......:.x.......................:..........x.x....::......x.-.:.....................x....x.x.......:..:x..x..:::.......-...x....xx...x.:.x....xx::..:.x:.....x.--......x.x......:.:.xxx....x:x..:....::x...:. 13M3I31M5D11M4I103M1I95M1D58M1D39M2D44M 282/394 71.6% 402/94230402 0.0% 17/394 4.3% 11217155 NA +3014 chr4 + 190214555 60384781 60384780 60384840 60 ACCTGTATGTTTTTGGCAGAAAAATGCTTCATTTGGATAGAGAAAAAAATAGAGTGGGAG chr4 + 94230402 11267637 11267636 11267696 11267637 11267636 11267696 60 ATCTGAACATCCTGGGCAGAAAACAGCGTCATTTGGAGAGGGGAAGAAATAAAATGGAAG .:...x.::.::.x.........xx..x.........x..:.:..:.....:.:...:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 49117144 NA +3604 chr4 + 190214555 60386990 60386989 60387085 96 TTCTTTTCTCTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTT----CCTTCCTTCCCTCCTTCCTTCCTTCCTTCTTTCTCTCTCTTTCTTTCTT chr4 + 94230402 50176315 50176314 50176414 50176315 50176314 50176414 100 TTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ..x..:.:...x..::..x:x...x..:..x:............:.:----..:x...:...x::...:.x:..:.:.::.....:....:.:.x..... 47M4I49M 64/96 66.7% 100/94230402 0.0% 4/96 4.2% 10210675 NA +3085 chr4 + 190214555 60396209 60396208 60396263 55 TCCTGAAGGAAAATGTCCCAAGTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 84639525 84639524 84639579 84639525 84639524 84639579 55 TTCTAGAGGAAAAGACTCAGAAGTGTTTTTTTTTGTTTGTTTGTTTGTTTTTTTT .:..::.......x:::.x:.:x.......x...................x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -24243316 -69987086 +3148 chr4 + 190214555 60403150 60403149 60403238 89 AGACTCTAAAAAAAAAGAAAGAGAGAGAAAAAAAGAAAAAATTCAGTGTGAGACCAAGATAAATTCAATAATTTAAAAAACGTCCTAAA chr4 + 94230402 31999091 31999090 31999179 31999091 31999090 31999179 89 AGACTGTGAAAAAAAAGAGAGAGAGAGAGAAAGAAGAAAAGTACTGGAAAGCGCCAGAATAAACTACCCTAAAAAAAAAGTGCTCTAAA .....x.:..........:.........:...:.::....:.x.x.x:x::x:...::.....:.xxx:x.xxx.....::.::..... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 28404059 NA +3216 chr4 + 190214555 60404913 60404912 60404983 71 CAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAT----ATTTCTTTAAGCTTAAGCTTTCCATGTATCAA chr4 + 94230402 48830775 48830774 48830849 48830775 48830774 48830849 75 CAGAAGGAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGATCCACATTATGCTAAGAATATACTGTGCATATGCTAA ..:..::.............................:..----...x:x:....xx..x:..x.x...:.:::.. 39M4I32M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% 11574138 NA +3186 chr4 + 190214555 60404913 60404912 60404949 37 CAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAA chr4 + 94230402 75300455 75300454 75300491 75300455 75300454 75300491 37 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...................:.:............... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -14895542 -79334860 +3074 chr4 + 190214555 60404920 60404919 60404968 49 AAAAAAAAAAAAAAAAGAGAGAGAGAGAAAATATTTCTTTAAGCTTAAG chr4 + 94230402 66310865 66310864 66310913 66310865 66310864 66310913 49 AAAGAAAAAAAAAAGAGAGAGAGAGAGAAGAAATATTTTTAAAATTCAG ...:..........:..............:.x..x.:.....:x..x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -5905945 -88324457 +3673 chr4 + 190214555 60405674 60405673 60405772 99 CATGGTGGTGCATGCCTATATTTTCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCACTGGAGTTAGAGGTTGTAGAAAGCCATGATCACAA chr4 + 94230402 76033197 76033196 76033290 76033197 76033196 76033290 94 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGATGCCAA ..::........:.--.:..x..:..........::........x:xx.x.:.x.......:.x.x.:..:.xx:..:.......---......xx... 14M2D69M3D11M 68/94 72.3% 94/94230402 0.0% 5/94 5.3% -15627523 -78602879 +3061 chr4 + 190214555 60405853 60405852 60405894 42 TATATATGTATATATATACACACACAAATACATACATATTTT chr4 + 94230402 4409084 4409083 4409125 4409084 4409083 4409125 42 TACATATATATATATATACACACACAGAGACACACACATTTT ..:....:..................:.x...:...:..... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 55996769 NA +8692 chr4 + 190214555 60423520 60423519 60423800 281 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGGAAGGGA--GGGAGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAG chr4 + 94230402 1500702 1500701 1500971 1500702 1500701 1500971 270 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGA------------GGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaagga-agaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG .....::.:...:.:x..::.....:.:x..------------:....:.......::..:x.:.:..:....::.x:.:...x.:x.x.::....:x:.:...:.:..:.x....::..::...:...::.--..:.:x::::......::.....:...:.:.::.::.:.:....:::.:.:.::x:.:..::..:..:....:...-:....:.....:::::::.:...::xx....::..:..:::..::x...::..:.x......:.::.:.:.. 31M12D89M2I76M1D72M 157/268 58.6% 270/94230402 0.0% 15/268 5.6% 58922818 NA +8367 chr4 + 190214555 60423552 60423551 60423821 270 GGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGA-AGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGA--GGGAGGGAGGGAGGGAGGAAGGGAGG chr4 + 94230402 1500702 1500701 1500971 1500702 1500701 1500971 270 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaa--aatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagag-gaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG ..:..:..:.:.:..x...:.....:.:x..:..:.:.....:.:::.:x::.::.:....::.x:.:...x.:x.x..-:....x:..........--:.x...:::.:::.:...:...::x:.::.x:..:.::.:..::::...:...::....:.:::.:..:.::...::.:x.::.:.:.:....:.::......:.-.:::..:.::..::...:..:xx:..:.:.......:::.--:.......:x..:..:....::..:. 79M1I17M2D105M1D40M2I26M 155/267 58.1% 270/94230402 0.0% 6/267 2.2% 58922850 NA +3344 chr4 + 190214555 60423599 60423598 60423748 150 AGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGA---GGGAGGGAGGGAG chr4 + 94230402 890635 890634 890785 890635 890634 890785 151 AGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAG--AGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG .....x.xx...::..:..xx...:x:.xxx:x:..::.::..x..:::::.........x:.:......:.:x...x....::.:.--:..:x.x......::.xx:::..x.:x:.:.::..:x...x..:....---...xx.x...... 87M2D48M3I13M 86/148 58.1% 151/94230402 0.0% 5/148 3.4% 59532964 NA +3545 chr4 + 190214555 60423603 60423602 60423756 154 AGGGAGGGAGGGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAG chr4 + 94230402 890635 890634 890785 890635 890634 890785 151 AGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAG---AAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGAG .....x.xx...::..:..xx..::x:.xxx:x:..::.::..x..:.:::.........x:........:::x...x....---::...:...x.x:..::.:.:xx..:.:x.:x...:.:...x.::x.:...::.xx...xx.x...... 82M3D69M 86/151 57.0% 151/94230402 0.0% 3/151 2.0% 59532968 NA +9027 chr4 + 190214555 60423614 60423613 60423880 267 GAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGA--GGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGG---AGGGAGGGAGGAAGGGAGGGAGGGAG chr4 + 94230402 1500700 1500699 1500971 1500700 1500699 1500971 272 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG .:..:..:..:.....:x..::.....:.:x..:....:.....:.:::.:x.:.:..:....::.x:.:...x.:x.x.::....:x:.:...:...:::x..:.::..:::..::..::.--..:.:x::::......:::....:...:.:.::..:.:.:....:::.:...::x:.:..::..:..:..:.:...:..:.:::..:.::..::...:..:xx:..:.:.......:::---...::..:.x......:.::.:.:.. 122M2I119M3I26M 153/267 57.3% 272/94230402 0.0% 5/267 1.9% 58922914 NA +3490 chr4 + 190214555 60423752 60423751 60423880 129 GGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGAAG--GAAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAG chr4 + 94230402 890645 890644 890770 890645 890644 890770 126 GGGAGGGGGTTGGGGTAACCTGCAGAGAGGG-----GGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAG .......:.xx:...x::xxx.x..:.....-----..x..:.:::.........x:.:......:::x...x....:..:..::--.x......:..xx:::..x.:x:.:.::..:x...x..:..... 31M5D49M2I44M 77/124 62.1% 126/94230402 0.0% 7/124 5.6% 59533107 NA +3005 chr4 + 190214555 60456743 60456742 60456793 51 TGTGGTTTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTTTTTTAAGATACAG chr4 + 94230402 76505865 76505864 76505915 76505865 76505864 76505915 51 TGTGGTTTTGTTGCTGTTGTTTTTTGTTTTTTGTTTTTTTTTCACATTTAG .........x..x:xx..........................x.x..x:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -16049122 -78181280 +3017 chr4 + 190214555 60456747 60456746 60456780 34 GTTTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTT chr4 + 94230402 28925010 28925009 28925043 28925010 28925009 28925043 34 GTTTTTTTTTGTTTGTTTTTTGTTTTTTGCTTTT .............................:.... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 31531737 NA +3102 chr4 + 190214555 60472893 60472892 60472971 79 GTGGCGCACACCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGATCCCACGAGACCAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--....:::...........::........x.xx:x...x.:.....x....x:..x::x:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% -15560308 -78670094 +3617 chr4 + 190214555 60474250 60474249 60474328 79 GTGGTGCAAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........x.--....:.:...........::........x.xx.x...x::.........:.:..x.xx:..:...:. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -15558951 -78671451 +3026 chr4 + 190214555 60474362 60474361 60474414 53 GGCAATAAGAGGGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 39858762 39858761 39858814 39858762 39858761 39858814 53 GATATTAATGGGAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAA .::.x...x:..:..:........x..............x..x....x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 20615600 NA +3142 chr4 + 190214555 60493806 60493805 60493868 63 AATAACTAATATGTCTGAAACATTTACAAAGCCTACTTCTCAAACTATTCCAAATGAAATTCT chr4 + 94230402 60465598 60465597 60465660 60465598 60465597 60465660 63 AATACCGAATATGTCTGAAATATTTTTAAAGTGTATTTTTAAAGTAAAACTAAATGAAATTCT ....x.x.............:....x:....:x..:..:.x..::x.xx.:............ 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 28208 NA +3366 chr4 + 190214555 60498809 60498808 60498887 79 ACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGCTTTATCATAGGAAAAAAAGGAAGTAAAGTACACTAGGAA chr4 + 94230402 86704925 86704924 86705002 86704925 86704924 86705002 78 ACTGAATGAAATTTCA-CTCAAAAAAAAAAAAAAAAAAGCATGAAAGTATATGAAAAGGGATGTCAAGAACACCAGGGA ..x..:...:.:.:.:-.......................x.x.xx:..x:x:....:...x..x...x....:...:. 16M1D62M 57/78 73.1% 78/94230402 0.0% 1/78 1.3% -26206116 -68024286 +3999 chr4 + 190214555 60502807 60502806 60502996 190 TTCTTTCCCTCCCTCCTTTCCTTTTTCTTTCTTACCTGCTTACTTGTTTGCTTGATTCTTTCTTT-TCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTT-CTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCT chr4 + 94230402 33237582 33237581 33237764 33237582 33237581 33237764 183 TTTTATCCGTCTCTCCTTTCC---------CCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTTGGTCT ..:.x...x..:.........---------.:xx.....:.:::.xxx.x::.:..:..x...:.-..x.:.:.:x:.x...x.x.x..xxx.:.:.......x.....xx.:.x:......x::..x...:...:-....:.:x:......:..:::::.:x.....x.::.x.:..x.:...:..xx... 21M9D35M1I70M1I55M 111/181 61.3% 183/94230402 0.0% 11/181 6.1% 27265225 NA +3488 chr4 + 190214555 60502848 60502847 60502980 133 ACTTGTTTGCTTGATTCTTTCTTTTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTT--TCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCC chr4 + 94230402 37521393 37521392 37521527 37521393 37521392 37521527 135 ATTGGCTTTATTGAACTTTGGATCTCATCTTCTGCATTTATCTGATTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCTTGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTTCC .:.x.:..xx....x::..xxx.:..x.:..:.x:x:..x:.:xx:.:.....:x.......x:x:...:::....::::..x.x:x..x:......--.:.:....:::....:...:.....:....:..... 97M2I36M 79/133 59.4% 135/94230402 0.0% 2/133 1.5% 22981455 NA +4690 chr4 + 190214555 60502848 60502847 60503081 234 ACTTGTTTGCTTGATTCTTTCTTTTCTTTTTTT--CTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCTGTCTTTCTCTCTTCCTTTG chr4 + 94230402 38131848 38131847 38132080 38131848 38131847 38132080 233 ACTTGACTCATTAATTTCCTTTTGAATTCTCTTGACTTTTTTCCCCCCTCTTGCTTTTCCTTTTTTTTCTTCCTGCTTTTTGACTCTCTATTCCTTCTGTTTGGATCCCAGCTCTTCCGACTTT-TTCCCAGCTCTCAGAGCCTTTCTTCTTTGCCCACCTCACCTCTCTGTATGCAGTCACACATCTCCTTTGTTATCTCCATCCCT--TCTCACTGTCTTGCTGCTTATCTCTG .....x:.xx..:...:::.:..xxx..:.:..--...:......:...:..x..::........:..:.:::.x..:..:xx:.:...x...:....x.:.xxx.:..xx.:..:..xx....-..::.xx::..:xxxx.:..........x.::x:..:..:.:.::x.x:x:xx..x.x.x::.:....x:.x...:.x.:.:.--....x.......x..x::.x:..:.. 33M2I89M1D83M2D26M 135/231 58.4% 233/94230402 0.0% 5/231 2.2% 22371000 NA +4866 chr4 + 190214555 60502854 60502853 60503014 161 TTGCTTGATTCTTTCTTTTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTT chr4 + 94230402 50176266 50176265 50176426 50176266 50176265 50176426 161 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT ..x::..x:..x:.x:.:..:...:...:.:.x...x:..x:...:x.x.:x..:..::.x.::...x.x...x:....x.:..............xxxx..:x......:x:......x...:::::....::..:..:..:x.....:x.x..::::.. 161M 97/161 60.2% 161/94230402 0.0% 0/161 0.0% 10326588 NA +4318 chr4 + 190214555 60502867 60502866 60503050 184 TCTTTTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTC---------TTACTTTTTCTTTC------TTTCTCTCTCCCTTTCTTTTCTTTCTTCTTT chr4 + 94230402 61081208 61081207 61081403 61081208 61081207 61081403 196 TCTTTTCTAATTCTCTTTTTATGCCTTCTTCTCCCCTCAGATTTCCTTTGCCTAATCTTATTTCTGTTCTTTTTTCTTACTACTTTGCCTCTAT---TTCCTTCTAAACTAACCTGCTTTCCCATCACCTGCTCTATTCTGCACTAATTTATTTTTCATTTCCAGCAGTTCCTTCCTCCCTTCTAGCCCTCACTTCTCT ........xx..:....:..x:x.::::..:..:....xxx....:...x::.xx....x.:.:.x:.:..:......x..x....x....:x.---.:.:....xxx..xx...x:....::x..x:..x:...x...---------...:....:x....------..:..::.......::xx::..:x.....:. 94M3D42M9I14M6I31M 115/181 63.5% 196/94230402 0.0% 18/181 9.9% -578341 -93652061 +4304 chr4 + 190214555 60502872 60502871 60503003 132 TCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTT------CTTTCTTCTTTCCCTCCCTCCCTC-----------CTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTT chr4 + 94230402 10726111 10726110 10726256 10726111 10726110 10726256 146 TCATTTTATTTTATTTCTTTGTTGTTTCCCCCCCCCTTTTTTTTCTCCTCCCCCCGTTTTTTTTTTTTTTACAAAAATTTCTACAT---CTAAATCACTTTGCTATAGAAACATTAttttctttccttttttttttttttttttttttt ..x....x.:..x....::.x:.x....:..:..::...:......::..:.::.x:....:....:...------x.....x.x.---..xxx..x..:-----------.x..x................:....:..:....:... 70M6I10M3D11M11I38M 92/129 71.3% 146/94230402 0.0% 20/129 15.5% 49776761 NA +3282 chr4 + 190214555 60502893 60502892 60503015 123 CTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTTC chr4 + 94230402 53764505 53764504 53764627 53764505 53764504 53764627 123 CTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTC ......x.x:.x:...xx:..xx:..:xxx...:x.....:::::::.:.....:...............x:x.::x:..::.:..x...:.:.x::..:.:::x.....x..x.x.:..:.. 123M 71/123 57.7% 123/94230402 0.0% 0/123 0.0% 6738388 NA +3052 chr4 + 190214555 60502913 60502912 60502957 45 TTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTC chr4 + 94230402 27671346 27671345 27671390 27671346 27671345 27671390 45 TTACTTTTCCCTTTTCCTTTCTTTTCCCCCTTTCTTCTATCCCTC ..x......:...:..:.........:::.........x...... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 32831567 NA +3208 chr4 + 190214555 60502929 60502928 60503013 85 TTTTCTTTTCTTTCTTTCTTCTTTCC-----CTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTT chr4 + 94230402 22955496 22955495 22955585 22955496 22955495 22955585 90 TTTCCAATCCTATTTCTCCTCATACCTACAACTCCCTCTCTTCTTTATGTTCTTTCCATTTTTTTTCCCCTCCTTTCCTTACCCTCATTT ...:.xx.:..x.:.:..:..x.x..-----.......:..:....x.x........x.....:..::.:..:....:..x.::x.x... 26M5I59M 59/85 69.4% 90/94230402 0.0% 5/85 5.9% 37547433 NA +3389 chr4 + 190214555 60502971 60502970 60503052 82 TTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ........:...x.::..x.:..:...:..::..:xxx:x:.x.:..................x....:x..xx:.x..... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 3130943 NA +3094 chr4 + 190214555 60502980 60502979 60503096 117 CTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCTGTCTTTCTCTCTTC-CTTTGTTTCTTTCTTTTCCT chr4 + 94230402 89201222 89201221 89201339 89201222 89201221 89201339 118 CTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTCTCCT .....xx..x..:........:...:..x.:...xxx:.x.x::.:...:x:.xx.:.:...::...:...:....x:x.:..x:...:..x...:.-...x::x..::x:..:.... 97M1I20M 71/117 60.7% 118/94230402 0.0% 1/117 0.9% -28698242 -65532160 +3482 chr4 + 190214555 60502997 60502996 60503068 72 TTTCTTTTCTTACTTTTTCTTTCTTTCT----------CTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCTGTCTTT chr4 + 94230402 69163347 69163346 69163428 69163347 69163346 69163428 82 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTTGGCAGCCTTT ............::............:.----------...:.x..:...x..x........x...x...:.xx.x.:.... 28M10I44M 57/72 79.2% 82/94230402 0.0% 10/72 13.9% -8660350 -85570052 +3012 chr4 + 190214555 60503002 60503001 60503062 61 TTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCT chr4 + 94230402 66421019 66421018 66421079 66421019 66421018 66421079 61 TTTCTAAATTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCT .....x.x......:......::..:.::x......:.:..x:...:x....:.:..:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -5918017 -88312385 +3213 chr4 + 190214555 60503006 60503005 60503087 82 TTACTTTTTCTTTCTTTCTCT---------CTCCCTTTCTTTTCT----TTCTTCTTTCTTTCTCTCTCTGTCTTTCTCTCTTCCTTTGTTTCTT chr4 + 94230402 84992614 84992613 84992708 84992614 84992613 84992708 95 TTGCCATTTCTTTCCCCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCCCT ..:.:x........:::x...---------........:....:.----..:...:.....:...:.x...:.........::x..x.:.::.:. 21M9I15M4I46M 59/82 72.0% 95/94230402 0.0% 13/82 15.9% -24489608 -69740794 +3156 chr4 + 190214555 60507470 60507469 60507540 71 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACAAAAGAA---AAGAAAAAGAAGGAAAGAAAGAAAGAA chr4 + 94230402 34175634 34175633 34175707 34175634 34175633 34175707 74 CTTAACAAATAAAAGACAGAAAGAAAACACTAAAAATAGGAGAAGATAAGAAGTAGAAGAAAAGAAGTAAAGAA ..:..x...x....:.x.:...:....x.xx.....:.::....---.....:x.....:......:x...... 44M3I27M 53/71 74.6% 74/94230402 0.0% 3/71 4.2% 26331836 NA +3833 chr4 + 190214555 60510521 60510520 60510642 122 GGAAGGGAGGGAAAGGAAGGGAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAAAGAAAGAAAAGAAGAAAGGAAGGAAGAAAGAAAGAGAA chr4 + 94230402 12647117 12647116 12647232 12647117 12647116 12647232 116 GGAAGGTAATGAATGCAAGGGGGGGGGAAGAGGGAAAATTAATGGGAAGAAATTAAAGGAGAAAATAAAAATGGGAAAATAGGA------CAAGGTTGTGAGGGGAAAAAAAAAAAAGAGAA ......x.:x...x.x.....::..::.:......::.xx:.x....:.:..xx....:..:...x.....x::...:.x..:.------x..:.xx.x:...::::..:...:........ 84M6D32M 75/116 64.7% 116/94230402 0.0% 6/116 5.2% 47863404 NA +3506 chr4 + 190214555 60510530 60510529 60510619 90 GGAAAGGAAGGGAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAAAGAAAGAAAAGAAGA chr4 + 94230402 58935720 58935719 58935809 58935720 58935719 58935809 90 GGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGA ..:..x..:::...::x.:x..xx:.....::.x.::::.........:x.:.....x...::.........x..x.x...::..:.... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 1574810 NA +3526 chr4 + 190214555 60510541 60510540 60510611 71 GAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAAAGAAAGA chr4 + 94230402 39003023 39003022 39003093 39003023 39003022 39003093 71 GAAAGAAAGGGAGGAGAATGGAGGGGGGGGAAGGAAAAAAAGGAAGACCGAACATAGGAAACTGTGGAAGA ...:......::....:.x.......:..........:..:.:....xx:..x.x.:....xx:x.:.... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 21507518 NA +3117 chr4 + 190214555 60510549 60510548 60510598 50 GGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAG chr4 + 94230402 73633585 73633584 73633634 73633585 73633584 73633634 50 GGGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAGG ..:...:..:...:..::.:......:..:..::...:..........:. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% -13123036 -81107366 +3023 chr4 + 190214555 60510550 60510549 60510596 47 GAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGA chr4 + 94230402 24698987 24698986 24699033 24698987 24698986 24699033 47 GGGGGGGGAGGGCGGGGGGGGGGAGAAAGAAAGAAAAAAAGAAAAGA .:...:...:..x....:...:::.......:....:...:...... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 35811563 NA +3228 chr4 + 190214555 60528175 60528174 60528258 84 ACATGGTGGCATGCACCTGTAGTCCCAGCTACTGAGGAGGCTGAGGTAGGAAGATCACTTGAGCCTGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--.....x......:.........x:::........x:xx.x::.x.......:..::.:..x.xx:..:..:.. 9M2D73M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% -15505021 -78725381 +3341 chr4 + 190214555 60538620 60538619 60538665 46 TCTCTCTCTCAAAAACAAAACAAAACAAAACAAAAAAACGGCCAAA chr4 + 94230402 6760475 6760474 6760519 6760475 6760474 6760519 45 TCTCTCTCTCAAAAACAAAACAAAAC-AAACAAAAAAACCCCCAAA ..........................-............xx..... 26M1D19M 43/45 95.6% 45/94230402 0.0% 1/45 2.2% 53778145 NA +3234 chr4 + 190214555 60551668 60551667 60551732 65 ATACACAGATACACACTAAAATGTATTAATAGAGTGTAAATATAATCTATCTCTCCTAATAGGGT chr4 + 94230402 32712204 32712203 32712264 32712204 32712203 32712264 61 ATGCAGAGATAAACATTAATATGTATTAATAGTATGTAAATATAATTAATCG----TAATAGGAT ..:..x.....x...:...x............x:............:x...x----.......:. 52M4D9M 50/61 82.0% 61/94230402 0.0% 4/61 6.6% 27839464 NA +3410 chr4 + 190214555 60569373 60569372 60569468 96 TCTCTTCCCTTACTTTCTCCCCAACAGAATCTTTCTCTCTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCCCCCTCCCTCTCTCCTGGGCCATCT chr4 + 94230402 86573701 86573700 86573789 86573701 86573700 86573789 89 TCCCTTCCCTTCTCTTTTCCCCAATGGAAGCTTTCTCTCTCCCCCTGCCTTCTTCG-------TTTCTCACAGCCTCTCCTAACCCTGTGACATCT ..:........x::..:.......::...x...........:::..x:...::..x-------.:....x.xx....:.::xx:....x.x..... 56M7D33M 61/89 68.5% 89/94230402 0.0% 7/89 7.9% -26004328 -68226074 +3989 chr4 + 190214555 60572412 60572411 60572501 90 GTATATATACATATATATGCATACATATATAAATGTATGCATATGTGTGTGTGTGTACACATATATATGTGTGTATATGTGTGTACACAT chr4 + 94230402 5214232 5214231 5214321 5214232 5214231 5214321 90 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.:.:::..x:.:.x....:...:..x..x:.........x..::........::..x.::.:.:....::.::.x:.....:..... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 55358180 NA +3053 chr4 + 190214555 60572427 60572426 60572468 42 TATGCATACATATATAAATGTATGCATATGTGTGTGTGTGTA chr4 + 94230402 80045224 80045223 80045265 80045224 80045223 80045265 42 TATACATACAGATATGAATGTATGCATCTGTGTGTGTGTTTA ...:......x....:...........x...........x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -19472797 -74757605 +3104 chr4 + 190214555 60572457 60572456 60572517 61 TGTGTGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 4878009 NA +3836 chr4 + 190214555 60572473 60572472 60572628 156 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATG--------AATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....:........x.x....x.------------:..:.x.......::x:...:...:x::...::x....:..:.....x...::x.x.....:...:...:..--------x.....::..:.:.:.x.xx....-:.x.x.:..x.....:. 22M12D72M8D24M1D17M 91/135 67.4% 135/94230402 0.0% 21/135 15.6% 39463279 NA +3271 chr4 + 190214555 60572485 60572484 60572534 50 TATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ...:......:.:......:x............x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15756885 NA +3081 chr4 + 190214555 60572491 60572490 60572545 55 TGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 4878037 NA +3869 chr4 + 190214555 60572501 60572500 60572668 168 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATG--------AATATGCATGCACACGAGATTACA-------------GTTTCTGTGGGTGTACA ....:........x.x....x.------------:..:.x.......::x:...:...:x::...::x....:..:.....x...::x.x.....:...:...:..--------x.....::..:.:.:.x.xx....-------------..x.x....x....... 22M12D72M8D24M13D17M 94/135 69.6% 135/94230402 0.0% 33/135 24.4% 39463307 NA +3271 chr4 + 190214555 60572513 60572512 60572562 50 TATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ...:......:.:......:x............x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15756913 NA +3081 chr4 + 190214555 60572519 60572518 60572573 55 TGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 4878065 NA +3787 chr4 + 190214555 60572529 60572528 60572670 142 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTG--TACACATATATATGTGTGTATA---TGTGTGTGTACACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:........x.x....x.------------:..:.x.......::x:...:...:x::...::x....:..:.....x...::x.x.....:...:...:..--..::...::.:.:.x.xx..:.---.x....x..::... 22M12D72M2I22M3I14M 87/130 66.9% 135/94230402 0.0% 17/130 13.1% 39463335 NA +3271 chr4 + 190214555 60572541 60572540 60572590 50 TATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ...:......:.:......:x............x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15756941 NA +3081 chr4 + 190214555 60572547 60572546 60572601 55 TGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 4878093 NA +4209 chr4 + 190214555 60572557 60572556 60572696 140 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTGTACACATATATATG-------TGTGTATGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:........x.x....x.------------:..:.x.......::x:...:...:x::...::x....:..:.....x...::x.x.....:...:...:..x:..::...::.:.:.-------x..x.x....x....... 22M12D88M7I18M 87/128 68.0% 135/94230402 0.0% 19/128 14.8% 39463363 NA +3271 chr4 + 190214555 60572569 60572568 60572618 50 TATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ...:......:.:......:x............x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15756969 NA +3081 chr4 + 190214555 60572575 60572574 60572629 55 TGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 4878121 NA +4123 chr4 + 190214555 60572585 60572584 60572724 140 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGT---------GTGTATGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTG--------------GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:........x.x....--------------x.:..:.x...:...::x........:x:....::x...::..:.....x...::x.x.....:.......:..x.:.:::..::.:::---------..x.x....x....... 20M14D89M9I17M 86/126 68.3% 135/94230402 0.0% 23/126 18.3% 39463391 NA +3271 chr4 + 190214555 60572597 60572596 60572646 50 TATATGTGTGTACACATATATATGTGTGTATATGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ...:......:.:......:x............x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15756997 NA +3081 chr4 + 190214555 60572603 60572602 60572657 55 TGTGTACACATATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.:..:.:...:.::.....:.......:.x.x...:..::.....:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 4878149 NA +4106 chr4 + 190214555 60572613 60572612 60572752 140 TATATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT----GTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....:........x.x....x.:::.:x.....:.::x:::....::x:......x:...::.....::x:...:x.x...----:.....:...:..x..:..::..:....:x:xx..::-..x.x....x....... 81M4D37M1D17M 86/135 63.7% 135/94230402 0.0% 5/135 3.7% 39463419 NA +3644 chr4 + 190214555 60572616 60572615 60572736 121 ATATGTGTGTATATGTGTGTACACATATATATGTGTGTATATGTGTGTGTACACATATATATGTGTG----TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTC--------TCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x..:x.:..:........x--------.x....x.::...x.:.:.....x..:.....:x:...----...::..:.....x...::x.x.....:.......:..x.:.:::..::.:::. 21M8D38M4I54M 75/113 66.4% 117/94230402 0.0% 12/113 10.6% 39463429 NA +3229 chr4 + 190214555 60572640 60572639 60572706 67 ATATATATGTGTGTATATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:::....xx......:::x..x::x:.x....:.:...................::.:....... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 33247149 NA +4237 chr4 + 190214555 60572641 60572640 60572780 140 TATATATGTGTGTATATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT----GTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....:........x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x:...:x.x...----:.....:...:..x..:..::..:....:x:xx..::-..x.x....x....... 81M4D37M1D17M 87/135 64.4% 135/94230402 0.0% 5/135 3.7% 39463447 NA +3280 chr4 + 190214555 60572655 60572654 60572704 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757055 NA +4010 chr4 + 190214555 60572665 60572664 60572808 144 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT----GTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA .:.x:...:..:.....x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x:...:x.x...----:.....:...:..x..:..::..:....:x:xx..::-..x.x....x....... 85M4D37M1D17M 87/139 62.6% 139/94230402 0.0% 5/139 3.6% 39463475 NA +3579 chr4 + 190214555 60572671 60572670 60572792 122 TATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.------------:..:.x...:...::x:...:...:x::...::x...::..:.....x...::x.x.....:.......:..x.:.:::..::.:::. 22M12D88M 70/110 63.6% 110/94230402 0.0% 12/110 10.9% 39463477 NA +3280 chr4 + 190214555 60572683 60572682 60572732 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757083 NA +4010 chr4 + 190214555 60572693 60572692 60572836 144 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT----GTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA .:.x:...:..:.....x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x:...:x.x...----:.....:...:..x..:..::..:....:x:xx..::-..x.x....x....... 85M4D37M1D17M 87/139 62.6% 139/94230402 0.0% 5/139 3.6% 39463503 NA +3579 chr4 + 190214555 60572699 60572698 60572820 122 TATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.------------:..:.x...:...::x:...:...:x::...::x...::..:.....x...::x.x.....:.......:..x.:.:::..::.:::. 22M12D88M 70/110 63.6% 110/94230402 0.0% 12/110 10.9% 39463505 NA +3280 chr4 + 190214555 60572711 60572710 60572760 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757111 NA +4041 chr4 + 190214555 60572721 60572720 60572862 142 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATAT-GTGTATGTGTGTGTACA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGT----GTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA .:.x:...:..:.....x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x:...:x.x...----:.....:...:..x..:..::..:....:x:xx..:-..x.x....x....... 85M4D36M1I17M 87/138 63.0% 139/94230402 0.0% 5/138 3.6% 39463531 NA +3579 chr4 + 190214555 60572727 60572726 60572848 122 TATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:........x.x....x.------------:..:.x...:...::x:...:...:x::...::x...::..:.....x...::x.x.....:.......:..x.:.:::..::.:::. 22M12D88M 70/110 63.6% 110/94230402 0.0% 12/110 10.9% 39463533 NA +3280 chr4 + 190214555 60572739 60572738 60572788 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757139 NA +4033 chr4 + 190214555 60572749 60572748 60572888 140 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTGCA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA .:.x:...:..:.....x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x:...:x.x...::.:..:.:....x:....::..:::..:x:xx..:.-..x.x....x....:.. 122M1D17M 83/139 59.7% 139/94230402 0.0% 1/139 0.7% 39463559 NA +3543 chr4 + 190214555 60572755 60572754 60572869 115 TATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTACACATATAT chr4 + 94230402 21109194 21109193 21109296 21109194 21109193 21109296 103 TATACATGTGTGTCTCTGTGGG------------CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ....:........x.x....x.------------:..:.x...:...::x:...:...:x::...::x...::..:.....x...::x.x.......:.....:.:x.:..::.. 22M12D81M 68/103 66.0% 103/94230402 0.0% 12/103 11.7% 39463561 NA +3280 chr4 + 190214555 60572767 60572766 60572816 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757167 NA +3526 chr4 + 190214555 60572777 60572776 60572889 113 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTGCAC chr4 + 94230402 21109190 21109189 21109302 21109190 21109189 21109302 113 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC .:.x:...:..:.....x.x....x.:...:x:....:..:x::::...::x:......x:...::.....::x::..:x.x.::::....:.:.:..x..:..::..::... 113M 65/113 57.5% 113/94230402 0.0% 0/113 0.0% 39463587 NA +3434 chr4 + 190214555 60572783 60572782 60572895 113 TATATATGTGTGTATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATATGTG----TATGTGTGTGTACACATATATATGTGTATGTGTGTGTGCACATATAT chr4 + 94230402 21109194 21109193 21109296 21109194 21109193 21109296 103 TATACATGTGTGTCTCTGTG--------------GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ....:........x.x....--------------x.:..:.x.:.:...::x........:x:...----...::..:.....x...::x.x.......:.....:..x.:..::.. 20M14D32M4I47M 70/99 70.7% 103/94230402 0.0% 18/99 18.2% 39463589 NA +3280 chr4 + 190214555 60572795 60572794 60572844 50 TATGTGTGTGTACACATATATATGTGTGTATGTGTGTGTACACATATATA chr4 + 94230402 44815600 44815599 44815649 44815600 44815599 44815649 50 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACA ..........:.:......:x..........:.x...x........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15757195 NA +3484 chr4 + 190214555 60572805 60572804 60572947 143 TACACATATATATGTGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTGCACATATATATGTGTATACGTGTGTGTGCACAT-ATATGTGTGTATGTGTGTGTGTGCACTT chr4 + 94230402 21109190 21109189 21109331 21109190 21109189 21109331 142 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTT--CTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACAGTT .:.x:...:..:.....x.x....x.:...:x:....:..:x:::..:.::x:..::..x....::.:....:x::..:x.--x::.:...........:x:.:..::......:-.x..xxxx..x.x....x....:..x.. 81M2D32M1I28M 85/141 60.3% 142/94230402 0.0% 3/141 2.1% 39463615 NA +3104 chr4 + 190214555 60572821 60572820 60572881 61 TGTATGTGTGTGTACACATATATATGTGTATGTGTGTGTACACATATATATGTGTATGTGT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x...:..:.:.....:.:......:.:.....:.x.x...:..::.......:.:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 4878373 NA +3644 chr4 + 190214555 60572839 60572838 60572972 134 TATATATGTGTATGTGTGTGTACACATATATATGT----GTATGTGTGTGTGCACATATATATGTGTATACGTGTGTGTGCACATATATGTGTGTATGTGTGTGTGTGCAC------TTATATGTGTGTATGTGTGTGTGTACA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTG----TGTATATGTGTATGAATATGCATGCACACGAGATTACA-----GTTTCTGTGGGTGTACA ....:......:.x.x....x:.::..x.......----::..:.::x:...:..x....::.:....:x.:..:x.x..----.:...:........x:.:..::.....------...:.-----..x.x....x....... 35M4I41M4D27M6I5M5D17M 87/125 69.6% 135/94230402 0.0% 19/125 15.2% 39463645 NA +3597 chr4 + 190214555 60572859 60572858 60572998 140 TACACATATATATGTGTATGTGTGTGTGCACATATATATGTGTATACGTGTGTGTGCACATATATGTGTGTATGTGTGTGTGTGCACTTATATGTGTGTATGTGTGTGTGTACACA------TATATGTGTGTATGTGTGTGTGCA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTG----TGTATATGTGTATGAATATGCATGCACACGAGATTACA---GTTTCTGTGGGTGTACA .:.x:...:..:.....x.x....x.:.:.:x.....:.::x:.:.::.::x:...:..x....:..:....:x::..:x.x..----.:...:........x:.:..::.:....------..:.---..x.x....x....:.. 84M4D28M6I4M3D17M 85/133 63.9% 139/94230402 0.0% 13/133 9.8% 39463669 NA +3713 chr4 + 190214555 60572865 60572864 60572980 116 TATATATGTGTATGTGTGTGTGCACATATATATGTGTATACGTGTGTGTGCACATATATGTGTGTATGTGTGTGTGTGCACTTATATGTGTGTATGTGTGTGTGTACACATATATG chr4 + 94230402 21109194 21109193 21109297 21109194 21109193 21109297 104 TATACATGTGTGTCTCTGTGGGCGTATTTATA------------TGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ....:......:.x.x....x..::..x....------------...::x........:x:.....:x.:.::..:..:...:..::x.x...:.:.:.....:.:x.:..::... 32M12D72M 69/104 66.3% 104/94230402 0.0% 12/104 11.5% 39463671 NA +3915 chr4 + 190214555 60572939 60572938 60573021 83 TGTGCACTTATATGTGTGTATGTGTGTGTGTACACATATATGTGTGTATGTGTGTGTGCATATATATGCGTACACACACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x..:..:.:.x.....:............:xx..:..x.::.::..:...:x:.:...:.x.....::...:........ 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -25261594 -68968808 +3100 chr4 + 190214555 60572963 60572962 60573024 62 TGTGTGTACACATATATGTGTGTATGTGTGTGTGCATATATATGCGTACACACACACATATA chr4 + 94230402 47135177 47135176 47135238 47135177 47135176 47135238 62 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACA .....:..::....:.::..x:.xx..x.:...:...:...:..:............::.:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 13437786 NA +3789 chr4 + 190214555 60572969 60572968 60573089 121 TACACATATATGTGTGTATGTGTGTGTGCATATATATGCGTACACACACACATATATAC--ATGTGTACACACACACACATATATATACACATATATATATATGTATGTATTAGGGTTTAGAG chr4 + 94230402 21109190 21109189 21109312 21109190 21109189 21109312 123 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAG .:.x:...:........x.x....x.:.:..x......:::x....:.:..x::.:...--..::...:::..x..::.x.x.:.:..:.::.:...:x.....:...:.:xx.:.x...x.. 59M2I62M 75/121 62.0% 123/94230402 0.0% 2/121 1.7% 39463779 NA +3316 chr4 + 190214555 60572985 60572984 60573049 65 TATGTGTGTGTGCATATATATGCGTACACACACACATATATACATGTGTACACACACACACATAT chr4 + 94230402 42936203 42936202 42936267 42936203 42936202 42936267 65 TATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATAT ...x.x..x:.....:.....:.:...x:...:......::.x:....:.....x.:..:..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 17636782 NA +3662 chr4 + 190214555 60573000 60572999 60573080 81 ATATATGCGTACACACACACATATATACATGTGTACACACACACACATATATA-----------TACACATATATATATATGTATGTATTAG chr4 + 94230402 23247722 23247721 23247813 23247722 23247721 23247813 92 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATAG ..:.:..::.:........:x...:x....:..........:.....:.:.:.-----------....::x...x......:....x.x... 53M11I28M 60/81 74.1% 92/94230402 0.0% 11/81 13.6% 37325278 NA +3101 chr4 + 190214555 60603033 60603032 60603073 41 ATGTTGATGTTGTTGTTGTTTTCTGTTTGTTTGTTTTTCTA chr4 + 94230402 59675244 59675243 59675284 59675244 59675243 59675284 41 ATACTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTA ..::..x...............:...............:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 927789 NA +3509 chr4 + 190214555 60611274 60611273 60611347 74 GTGCACCTGTGGCCCCAGCTACTTAGGAGGCTGAGGCCTGAGGACCACTCAAGCCTAAGAGATTGAAATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:.::..........:::........x....x.:.x....::.:..:.::..x..x::::..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -15421930 -78808472 +3520 chr4 + 190214555 60611372 60611371 60611484 113 TGTGACAAAATGGGATGCTGACAGAAAGAA-AAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAA------GAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAG chr4 + 94230402 51148360 51148359 51148478 51148360 51148359 51148478 119 TGTGGCAAA---TGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ....:....---x.::.:.x..........-...xx.x.......:...:.........x.:.------...--::..x.:..x.x:..::.x:...:.:...:..:........::..x.. 9M3D18M1I32M6I3M2I48M 79/110 71.8% 119/94230402 0.0% 12/110 10.9% 9463012 NA +3106 chr4 + 190214555 60611417 60611416 60611498 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:.:x.x...:.:x...:..::.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 19499239 NA +3093 chr4 + 190214555 60611433 60611432 60611502 70 AGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAAGGAA-----AGAAAGAAAAAGAAAAGAAAAGAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.::............:.-::.......x.x..:....-----.x.:......x.:...:....:.. 27M1I19M5I24M 54/70 77.1% 76/94230402 0.0% 6/70 8.6% 22532655 NA +3208 chr4 + 190214555 60611437 60611436 60611529 93 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAGGCAAATGCTACAAGCC chr4 + 94230402 41112178 41112177 41112270 41112178 41112177 41112270 93 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATATTCCTGACC ..:..:::......x..x...x...x....x.:..:.:xx.x...x.:.:......:.:x.x...:..x....:.:.::....::.x.x::.. 93M 59/93 63.4% 93/94230402 0.0% 0/93 0.0% 19499259 NA +3525 chr4 + 190214555 60611441 60611440 60611514 74 AGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAGG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG ..:....:..:...:...-......x:..x...x.::.:....x...x.x...x.x:................:. 18M1I56M 56/74 75.7% 75/94230402 0.0% 1/74 1.4% -10989585 -83240817 +3093 chr4 + 190214555 60624132 60624131 60624213 82 GAAATCAATGTGAATTAA---TACCTGCCTTGAATTGTTTTTTGTTTTTTGTTTTTCGTTTTTTTTTGTTTTTTTTTTTTTTGAG chr4 + 94230402 62408924 62408923 62409004 62408924 62408923 62409004 81 GAAATCACTGTTCATAAAAGGTTTTTGCTGTG----GTTCTTTGTTTTGTGTTTTCTCCTTTTTTTTATTTTTCTTTTCTGTGAG .......x...xx..x..---.x::...:x..----...:........x......::x:........:.....:....:.x.... 18M3I11M4D49M 59/78 75.6% 81/94230402 0.0% 7/78 9.0% -1784792 -92445610 +3012 chr4 + 190214555 60624153 60624152 60624207 55 CTGCCTTGAATTGTTTTTTGTTTTTTGTTTTTCGTTTTTTTTTGTTTTTTTTTTT chr4 + 94230402 65019527 65019526 65019581 65019527 65019526 65019581 55 CCATCTGGAACAGTTTGCTGTTTTTTGTTGTTGGTTTTTTTTTGTTGTTGTTTTT .:::..x...:x....x:...........x..x.............x..x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -4395374 -89835028 +8320 chr4 + 190214555 60671805 60671804 60672095 291 TTTCTTCTTCTTCCCATTGTAAAGGATGTAAAACAACACCTATAAGAACAGTTAC---TTAACAAGAACCGATTTTAAGTTGTTTGTTTGTTTGTTTTCTAAACACT--GACAGCTGTCATTGGGAAT--AGGAAAGGTACTAAAATCATATGGCTGACACATGTTTGAGACAAAAGCCTAGATATCACCAATTTTAGATATTCTTTTTAATATACAGTTAGATTTGCAACAGTAACTTAGTGTTT--GTCTTCAGTGCATTCTG--TATTTAGCAATGCTTATATAAATACAGTGTTCAAT chr4 + 94230402 49229244 49229243 49229535 49229244 49229243 49229535 292 TTCCTGTTTTTTCACACGTTACGGGACATACAGAGAAACCTATTGAAACAGCCATGGTTTAACAAGAACAGATGC-AAGAGGTTT------TTGTTTCCTGAATACTATGACAGCTGTCACTGTGAATGTAGAGGAGGTA--AACATGATATGGATGACACATGTATGAGACAGTAAACAAGGTAATGCCAATTGCAGATGTTATTTCTAATTTG-GGCAGGACTTGCTACAGTAATTTAACGTCCCGCTCTGGAATGCATTCAGAATTTTTATCAAAGCTTACTAAGCTGCAGGATTTAAT ..:..x:..:...x..:xx..x:...::..x.:x:.x......x::.....::.:---...........x...x:-...xx....------......:..:..:...--...........:..x....--..:::.....--..x..x......x..........x.......:x.:x.x..:..x::......x:....:..x...:....x.:-:.:x:..:....x.......:...::..::--x...xx.:.......x.--.x....x...x.....:xx.:x.:...x:..:... 55M3I17M1D9M6D16M2I19M2I10M2D73M1D30M2I17M2I35M 197/281 70.1% 292/94230402 0.0% 21/281 7.5% 11442561 NA +3668 chr4 + 190214555 60685260 60685259 60685335 76 CTCCAACTCCCATTTCAGGTTTGTTGTTGTTGTTGTTTGTGGTTTTGTTTTGTTTTGTTTGAGACAGGTTCTCTGT chr4 + 94230402 11479106 11479105 11479180 11479106 11479105 11479180 75 CCCCATTTCCCTTTCCAGGTTTGTTGTTGTTGTTGTTCGT-TTCTTTCTTTATTTAGTTAAAGGCACTTTTTCTGT .:...x:....x..:......................:..-x.:..x:...:...x...x:..:..xx..:..... 40M1D35M 57/75 76.0% 75/94230402 0.0% 1/75 1.3% 49206154 NA +3083 chr4 + 190214555 60691336 60691335 60691376 41 ACAGAAACAACAACAACAACAACAAAAAAAAAAAAAAAAAA chr4 + 94230402 73664718 73664717 73664758 73664718 73664717 73664758 41 ATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAA .:.:..:x......:.......................... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -12973382 -81257020 +3003 chr4 + 190214555 60691338 60691337 60691373 36 AGAAACAACAACAACAACAACAAAAAAAAAAAAAAA chr4 + 94230402 73664723 73664722 73664758 73664723 73664722 73664758 36 AGAAACAACGACAACAACAAAAAAAAAAAAAAAAAA .........:..........x............... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -12973385 -81257017 +3015 chr4 + 190214555 60704777 60704776 60704850 74 TACACATTTATATATATATATATATATATACACACACACACACACACGCATAGATGTAGATATAGATATATAGA chr4 + 94230402 46140837 46140836 46140908 46140837 46140836 46140908 72 TACACTATTATTT-TGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGA .....xx....x.-.:.:..-................x.x....:..:..:.x:....x...:...:x..:... 13M1D6M1D53M 55/72 76.4% 72/94230402 0.0% 2/72 2.8% 14563940 NA +3005 chr4 + 190214555 60704787 60704786 60704827 41 TATATATATATATATATATACACACACACACACACACGCAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.......................x.x......:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 56295705 NA +3034 chr4 + 190214555 60705116 60705115 60705207 92 TGGCTTCCTTGTCCTGTTGCAGAATATATATA------------TATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACA chr4 + 94230402 66642167 66642166 66642270 66642167 66642166 66642270 104 TGGTCGCCTTATTCCAGTAGGGGACATAAATGGAAAAGGTAAGCTATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA ...::x....:.:.::x.:x:.:.:...x..:------------....::......:xx....x:...:.:xx..:.........:x.........:...:... 32M12I60M 61/92 66.3% 104/94230402 0.0% 12/92 13.0% -5937051 -88293351 +3054 chr4 + 190214555 60705168 60705167 60705221 54 TATATATATATATATATATATATATATGCACACACACACACACACACACACACA chr4 + 94230402 53944239 53944238 53944292 53944239 53944238 53944292 54 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACA ......:x...:.x.x..x..x........................:xx:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 6760929 NA +3068 chr4 + 190214555 60717545 60717544 60717626 82 GGATTTTTAAAAAACATTTATGTATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACA chr4 + 94230402 6200749 6200748 6200830 6200749 6200748 6200830 82 GAATTTTTTAATGCTATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCTGTCCACA .:......x..x:x:....x...::..........:.x.:.....:.x.:.:...x.x:.:...:.x.:...xx.:.x:... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 54516796 NA +3152 chr4 + 190214555 60717552 60717551 60717632 81 TAAAAAACATTTATGTATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATA chr4 + 94230402 89748644 89748643 89748724 89748644 89748643 89748724 81 TAGATAATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ..:.x..::.x..::.....:.xx.x..:....x:.:.:...:.x.:.::::..........x.....:x.x.......:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -29031092 -65199310 +4327 chr4 + 190214555 60717554 60717553 60717678 125 AAAAACATTTATGTATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATATATATGTGTATATATATACACA chr4 + 94230402 21109181 21109180 21109301 21109181 21109180 21109301 121 AAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATA----TGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..::.x....::x....:..:.....x.x....x:::...x....----.:...x....:...:x::.:...x:...::...::..x:..::x.x.........:.:.:..x....::..:.... 45M4D76M 79/121 65.3% 121/94230402 0.0% 4/121 3.3% 39608373 NA +3412 chr4 + 190214555 60717563 60717562 60717678 116 TATGTATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATAT-------ACACATATATATACACATA-------TATATGTGTGTATATATATGTGTATATATATACACA chr4 + 94230402 79265522 79265521 79265651 79265522 79265521 79265651 130 TGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA .:...:.:.::.........xx........:...:.::...::....:..x.:....x.:.-------....x.x......x.:::.-------.x.x..x.....:.x..:::.x.x.:..x:.:.x.. 61M7I19M7I36M 77/116 66.4% 130/94230402 0.0% 14/116 12.1% -18547959 -75682443 +3176 chr4 + 190214555 60717563 60717562 60717636 74 TATGTATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATA chr4 + 94230402 89748651 89748650 89748724 89748651 89748650 89748724 74 TGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA .:....:........xx.x..:...:x..:.:...:.x...::...:.....:.:x.....:x.x.:.:...:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -29031088 -65199314 +3133 chr4 + 190214555 60717567 60717566 60717657 91 TATATATATGTGTGTGTGTG----TATATATATATATATGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATAT chr4 + 94230402 91738201 91738200 91738295 91738201 91738200 91738295 95 TATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ....x......x.x:x....----.....x...::........xx.:.x.x.x:.x..:.x.x.:.:...:.x.x.......:...x..:..... 20M4I71M 64/91 70.3% 95/94230402 0.0% 4/91 4.4% -31020634 -63209768 +3057 chr4 + 190214555 60717574 60717573 60717671 98 ATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATATATATGTGTATATAT chr4 + 94230402 5214224 5214223 5214321 5214224 5214223 5214321 98 ACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .:.::.x:......::::.x:.:.x.::::.:...:x:..:.:...::..x::...:.:.:.:.:..x.::.:......:..::.x......::.:.. 98M 54/98 55.1% 98/94230402 0.0% 0/98 0.0% 55503350 NA +3093 chr4 + 190214555 60717601 60717600 60717661 61 TGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATATATAT chr4 + 94230402 28997783 28997782 28997843 28997783 28997782 28997843 61 TGTAGTCACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATAT ....xx....:.....:x.x..........:..:..:xx:.xx......:........... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 31719818 NA +3009 chr4 + 190214555 60717612 60717611 60717678 67 ACATATATATATACACATATATATACACATATATATGTGTGTATATATATGTGTATATATATACACA chr4 + 94230402 76376872 76376871 76376938 76376872 76376871 76376938 67 ACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ......::.x.x.:....:...::.:...x.xx..:x........:.......:.....x.:.x.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -15659260 -78571142 +3677 chr4 + 190214555 60772354 60772353 60772435 82 GTGGTGGCACACACCTGTTGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x...x..:............:........x.xx.x...x........:....:..x:xx:..:..:.. 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% -15260847 -78969555 +3469 chr4 + 190214555 60786145 60786144 60786237 93 AGCTTCTAACAGTGAAGGTCAAGTACTAGAAGGTGATCTTCAGGTCATCTGCTGAAATGTATGTCTC-CAGAGGCTTTTAAGACCTGCAGAGTT chr4 + 94230402 82549177 82549176 82549270 82549177 82549176 82549270 94 AGCTTCTATCTGTGATTGCTAAATGCCAGAGATTAATCCTGAGATCATCCGCTGACATGTATGTCTCACAGTCACTGTTGACAGATATTGAGTT ........x.x....xx.::..:.:.:...::x.:...:.x..:.....:.....x...........-...xx:..x..:.x.xx.::x..... 67M1I26M 64/93 68.8% 94/94230402 0.0% 1/93 1.1% -21763032 -72467370 +11511 chr4 + 190214555 60829167 60829166 60829776 610 AAATGTAGATGGTCTCATTGCTTTGTGGGATAGGCTAATGAAAAATGTACTTGCTCACCACAGCAAGAATCAGGGCATGAACTAAAGCCATAAAACTTTTATGGTGCTTCTCCACAGATACCACATTGCTTTCTTTGCCTTTACTTTTCGCAGCACACTTGATAGGAAAAAAGCTAAGTGCAGGACCAATATTCAAAAGGATTGCTCAAACTTAAATTATTTTACTTTGGAGCTGAAGCA--GAGTCCTTCTGACAGCTTTACTGGCTGCAGGTTTGGTGGGAGGTAAAGCCA-TGCTCCATGTAGTGTTGCAAGTATGAAGTATAAATCAGGTTTCATAAATATGCCCATTTGGTGTACTCAATTGACTGTAAAATAATTATGCTCTGCTGTGTAATTGTTGTGCTGTGGAAGAAAACAGGACTTCTAAACAT-TTAACGGAAAGTGATTATGCAGCCT--GAATTAAGACTGTATTTTCTCCCACCATCTTCTGTAGTGCAACAAAAGCACTTTGT---AACAATTTCGTCTTAAATCCATAGGGTGTCAGGCTGCCTAGGCATTAGGGTTGTTTT--TTCTTTCTTTCC-TTTCTTTCCACACTTGTTTCTGACTGTCT chr4 + 94230402 49262143 49262142 49262720 49262143 49262142 49262720 578 AAATGTAA--GCTTTCATTGACTTACTGGATATGTGGTTTAAAAATGTAATGCTTTGCCATAAGAAAACATATTCTTTGAGTTGAAGCAGGAAA--TCTTATGGCAATTCTCCGTAG---------------------TTTTGATTTTAGCTATACACTCTGTAGAGCAGGCTTTGAG-GCAAGT----TTTTGAAAAGGAACTTTCAAAC----ACTGCTTCAAGAAGTGGCTGATCCATTGAGCTTCATTAACAATGTAATTGGTCTCTGGTTTAGATGGGAGAATTGCAAGTATTCTATGCCACATGGTAGAGATGACGTTTAAATTGGGTTTTTTAAATATGCACACTTAGTGTACTTAATTGACTGTAAAATAATTATTCTATGCTGTATAA---TTATGTTGTGGCAGGGAGCAAGGCTTCTAAACATCTCCGAGGCAAATGATAA--CAGCCTCAGAATTAAGACATTATTCTCTCCTAAAATATACAGTAAAATAACAAAAGTGTTTTATCTCCACAGTGAGGTCTT---TGCATGAGTCTTGAGGCTA--TATTTAAGAAGATCCTCTTAATGCTTTCTTCCCATCATTTTCTACCCTTTTCTCATACTATTT .......:--.x.:......x:..::x.....x.:x:x.x.........x.xx:.::...:.:x..:.xx:.xxx:x...::.:....x:x...--.:......::x......::..---------------------:...:x....x..x::.....:x:...::x.::xx:.:..-...:.x----.x..x.......x:x:......----.:.::..:.xxxx.x:.....xx..--...::::x:.:...::x.x.:...::x.x.....:.xx..::.x.xx..x.-.::..:...:x:::.x.:.::x....x..x.....::.....:x.........x..:..:.......:.....................x..x......:...---..:..:.....x..::.:..:.:...........-.:x:x..x..:....x.--......--..........xx....:.....:.xx..x.x.x...:x::........:::...:.---x...:.xxx.....---.x...::.x:x.x.....:--..xx:.xx.:.:.:x.:..--.x.......:..-.:x:....:..x...x.:..xx...:.:. 8M2D84M2D21M21D40M1D6M4D22M4D25M2I51M1I103M3D34M1I17M2D6M2I56M3I14M3D19M2D19M2I12M1I29M 364/566 64.3% 578/94230402 0.0% 56/566 9.9% 11567024 NA +17370 chr4 + 190214555 60840613 60840612 60841125 513 AGAAAAGCTATGACAGAACTAGGATGATGACAATTT-TTAAAATAGACACAGATTGTTACCAAAAAAGAAGAAAAC-TGATTTACCTGTTTGATGATTCACAAATCCCATTGCCCTTCAGTAAGACATCTCTTAGTCTTGTT--TTGTCACAT-TTTTAGATT-TAAAAAAGCCAAAATATATCCCATTAGCC--AAACACTAGATAACAAGAACAGATCAGAGTTT--------GAGAAGCATAGCAGTCATAGGAGGTCCAACAAATTACTGGTAGAGAGGATTTTGAACAAGCTATCTTCTCTCTCTTGCAAATATAATAAATTTTTTAAGATCAGAGTGCATATCACATGAAGTTAATAAAGTAGAAAATGACACTATTTACCTTCATCAAATAATATGTCA-AGAAATTTATAGCTCAGCTCCTTGGAAATCTGTCTTATTTTGCCTGCTGTTTTTTGTAACATTTTAATAGCCGGAAGCAAATGGGGAACATAAAGCATGCTAGAC---CAAAAAAATTAAAACACA chr4 + 94230402 49264521 49264520 49265043 49264521 49264520 49265043 523 AGCAATGAGATGTGAGAAATGGAATATTAGCAACCCATTTAAATAGACAAGGCTTG---CCAAAGAGGAAGAAAACCTGATTTATTCTTTCGATTAATAATAAATCATGTTGCCCTTTCAGCAGACATCTTTAATGCTTAATATTTGTCACATATTTTAGATAATAGAATACCCCAAATAGAGCCCATTAGCTTTAAGTACTGGAGGACATTAGCGGAACAGTCTTTTGTATGTGAAGAAAAATGGTAGACA-----GATTTGATAAATTATTGGTCATGGAGAATTTGAACAGCCCATCTCCTCCATTCTCCAAATGCAATAAATTTTATAAGATCAGAGTGTATGTCAAATGGAGTTCATAAAGTGGAAAATGACACTATTTACTTTCATCAAATAAAATGCCGCCAAAATTTATGGCTCTGCACCTCCAAAATCTGTCAGAATGCTACTGCTATTTTGTGTAACACTTTAGCAACC-CAAACTAATGGAG-CTATAAACCAACTTAGGCTAGCAGAAGGTCTAAAAAACA ..x..x.xx...xx....x.:.:..:x.::...:::-..x.........x:.x...---.....:.:.........-.......:::x..:...x.x.x.:.....x::........:x:xx........:.x.xx...:x.--.........-........x-..:..x.x..x.....x.x.........:--..::...:..x:...xx.:.:..x...xx...--------:....:x..:.:..x..-----.:.:::.:......:....x:x.::..x........:x.:....:...:x.::.x.....::..........x.............:..:...x...:....x.......:..................:............x...:.:-x:........:....x..x...:x:.........xx.x.x:xx.....:....x.......:....::.:..-x..:.x.....:.-x:.....x..xx:...:.---..:..::x:.....x... 36M1I19M3D17M1I65M2I9M1I9M1I29M2I32M8I17M5D149M1I72M1D13M1D18M3I18M 360/503 71.6% 523/94230402 0.0% 30/503 6.0% 11576092 NA +3212 chr4 + 190214555 60906695 60906694 60906743 49 ATTTTGTTGTTTTTGTTTGTTTGTTTGTTTTGTGGTACTCAGGCTGATA chr4 + 94230402 62953662 62953661 62953710 62953662 62953661 62953710 49 ATTTTGCTTTTTTTGTTTGTTTGTTTGTTTTTTAGTACTGTAACTGATA ......:.x......................x.:.....xx::...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -2046967 -92183435 +28837 chr4 + 190214555 60913079 60913078 60914018 940 AGAAAATAAATATTGCATAAACAGCCTACACTATTCGTTTTAAGCTA-AATCCATA--GAAAGTGCCTGGCGGCTCTAATGCTTTTCTCAAAGTTTTGTGGTTAAAAGTATTCATTTAACAT--AATTCCAACTTTCAATGCCAAACACAGTGAGTGACATTGTTTCCAGATGTAGCTTTTAGCAGATCATGTCTTGAGTAATTAAGTGCAGTCGGATCTGAAAAGACTAGCAATTGAAGCAGCACAGAATACAATTTATTGCCAAACAATTCCAGACACTAGGAAAAAAGTACAATTAAAGTGCTTCAAACATCAGACTCTGTGTTTTTG----AAAGCTGCAATTATTCCTTGAAGCAATAGCATCCATTTGTTTTAACACACAAGCGTGCACACATACACACACACACAATAAATAATAAAGTTAGTTAACTTGAAGAGATGAGGGAAGTTTATGAAAATATATCATCCCCTCTGAAATACCCTTTGTTTTATTG--TTACTTTGTTTGGTTGGGCATGTATATATGATATTATTTAGGGCGGTAATTACACATATAATGGAAACTCTTTAGATGTACACTTTATTCTATCCCAGTTAGTCCTAAG-GACAGACAGTTTGACTCCAAACCTGGACATCAGCTCTTAGCTCTCAGCTCTGAAGTGCTCAAAATAGTTTATGTCCATGTATAAACTGAACCATCAGAAATAGGAGCTCAATCCATTAAAATGTCAGAAGATCAAGTCCACAGTA-AGGCAATGGCTAAATTTCCAAGCCCACAGCCTGCATCATTGTCAGAGTCCCAAGATTATTTAGGTAAGTTGATTTATTAACATGGCAGCCAACAAGATTTGTGTTCTTGAAGGCTGATTTATAGACTGAATTCATTGCGTTTCACAAACTGTAAATAATATCTACTTAGAAACAAAATTTCAAACAGGCCGCTTTTA chr4 + 94230402 49281409 49281408 49282278 49281409 49281408 49282278 870 AGATTATAACTATTAAATAAAAGGCATGTGCAGTTTATTTTAAAATGTAATTTGTAAGGGGACTATTCAGCTGTACTAAT--TTCCTTCAAAGATTTGCATTTAAGAGTATGTGTTTAACATTAAGTTAGATTTTCCAGTGCCAAAAGCAGAAAGTGACATCGTTTCCAGATGTAGATTCCAGTAGATCATGTCTTGAATAATTAAGGGCTGTCAGATCTGAGCAGGCTCATAAGTGAAGCTGTATAGAACACAATTTATTGCCAAACAATGAGAGACCTTCAGTGAAAATCAGAAATCATGTATCTTTAACATAAGGCTTT-TATTCTGGGAATAAACTTGGAGGTA-----TGGACTAAAAACATCAAATTTTCCTTCC---------------------------------AAATGGAAAAGTTAAACAA------------AAAGCAGTTCTCGTGAGTAT-TCTTTCTATGTTCAGCATTATTTGTCTCCCTGTATTCCCGTGTTTGCTTGTTATTTTCTGTTGGAAAATGT-----GCACAAATTACACA-------------CTTT---------CCCTAACCTACTCTACTTAGCCAGAGGAGACAGACTGTTTGACTCCAGACCTGAACATCAGCTGTTTGTATTCAGCTCAGTACTGCTCAAAATAGTTTATAGCTGAGTATAAACTGAACCATCAGAAATAGGATCTCAATCCTTTGAAATGTCAGCAGATCAAGTTCACTGCACACGCAGGAGCTGAATTTTCAATCCAGAAGGCTGCATCATTGTCAAAAGCTCAAGATTATTTAGGTGAACTGATTTACTAACATGGCAACTAACAAGATTTGTGCTC-CAAAGTTTGATTTATACTTTGGATTCATCTTGTCAGAACAACTGTAAATAATAACTCCTGAG-AGCAACATTTTGAATGGTCCATTTTTA ...xx....x....:x.....x:..x.:::.x:..::......:x.:-...:::..--.::.x.:::::..x.:x.....--..:::......x....::x....:.....x::........--.:..xx.x:..:..:.......x:...x:........:..............x..::..:..............:........x..x...:.......:x..:..x::..x......x.:.:....:....................xxx....x:.x:.x:....x:.x..x.x.x..:::.:x.....x..:..:.-.:..:.x.----...x:..x.:x..-----..:.x:..x.:....x.x..x.::.xx.---------------------------------....::x.......:x:..------------.::.x....:x:.x:.:...-..x.:.:x.x.xx.::.::x.....:.:x:..--..x.:x......x...xxxx.x.x.:.xx..x.x.:.-----..:xx.........-------------....---------.::..x:...::.:.x....:.xx.:.-.......x...........:.....:.........x..x.:x:.......x.x.x.................:x.::x...........................x........x..:.........x.........:...x.:.-.x...:x:...:.....:...x..x:x..x..............:.:x.:...............:.::.......:..........:.:.............:..-::...x:.........xx:..:......:x:..:xx.xx..............x..x..x..-.:...x....::..::.x..::..... 47M1I8M2I22M2D40M2I198M1D8M4I13M5D28M33D19M12D20M1D32M2I37M5D14M13D4M9D27M1I145M1I106M1D62M1D27M 605/857 70.6% 870/94230402 0.0% 96/857 11.2% 11631670 NA +3234 chr4 + 190214555 60915468 60915467 60915546 79 GTGGCACATGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAAGAGAATAATTTGAACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:.........:x.:........x.xx.x...xx.:..........:..x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -15117733 -79112669 +3332 chr4 + 190214555 60924747 60924746 60924840 94 AGTTTTGCCACTCTCAAGCTGTGTGAGTTTAAGCAAGGAACTTTATTTCTCTGTGTACTCATTTGTCCAAATGTTGAATGATAATAATAATAAT chr4 + 94230402 79037094 79037093 79037187 79037094 79037093 79037187 94 AATTTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGAT .:....:::x..xx........:...x:...:.x...xx.:.......x....x..x::x...:x.....:.:.x:....xx:.x......:.. 94M 62/94 66.0% 94/94230402 0.0% 0/94 0.0% -18112347 -76118055 +3765 chr4 + 190214555 60938410 60938409 60938515 106 CCCCTTCCTGAAGTGAGAATATGGTGACAGATTCCGGAGGAAAGCAAAGCTTTGGCTGTATTAAATTCAATCCAAAGAAGAAAGTGA-ACTAAAAATCTATTTGCCA chr4 + 94230402 49289063 49289062 49289167 49289063 49289062 49289167 105 CCTGCTCTGGAAGAGAAAACAT--TGACAGATCCCAGAGCAAAGCAATTGTTTCAATATAGTAAATTGAATCCAAACATGAAAATAAGATGGAAGACCTATTTTCCA ..:x:..:x....x..:..:..--........:..:...x.......xxx...x:x.:..x......x........x.x....:.:.-.:x:..:.:......x... 22M2D63M1I19M 74/104 71.2% 105/94230402 0.0% 3/104 2.9% 11649347 NA +3519 chr4 + 190214555 60941052 60941051 60941121 70 CATGGTGGTGCGCACCTGTAGTCCCAGCTACTTGGGAAGCTGAGACAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.......--..x......:...........::.:......x.xx.x...x::.........:.:.. 11M2D57M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -15092145 -79138257 +3058 chr4 + 190214555 60963838 60963837 60963896 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x......::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -15069368 -79161034 +17628 chr4 + 190214555 60978308 60978307 60978911 604 CTAAGGAAATTATAAATGTGATAGATCTAAGGAAATAAAAGATAATTATAGCTTAGATATCAAGCATCATTTCAGAATATAAACAATGTGAGTTCAGGTTGTCTGGCTTCTTATCACTACCTAAGGGGAAAGTAATGACCCCTGTAAACATCTAGTACCCATGAAACTGTAACAAAATGTTGTTTAGAGATGTCTACTGATTGTGAAATTAACTTCATGGAAAATAACTTAATGTATATCGCACCAAAGACAGAGGAAGCATAAAATATATAATATTGCAGTTACAGGCTACATAAAATCTTATTGGCTCAGTGATAAATACTTGCACTCCAGCGATTTTACTGTTTTACTGACTACCTTCTTT-GGGAATGTTTACAAAATACATGGACAACTTATTAATCA-TTTTAAAATACAGTAATTTTAAATCTAGTAGCATGAAATTGTGTGCAAAGCAGTCACTCTGAAAAGTTTTTAATTAATGGGATAATTTTCCAGTCAAAAACTATCTTGCCTAAATAAAGTTCC---CTGTATACAGAGAAAATATTTACAAGGC-ACATGAAGA----------------CTAGAAGGCTCTTGTCCAGAAATTAATGTTATACAATAAAAA chr4 + 94230402 49308604 49308603 49309207 49308604 49308603 49309207 604 CTGAAAACTTTGTAAACCTGACAAATCCAATAAAATAAAGG-TAATTGTGCCTTGCGTTCCAAGCAT--TTTTAGCACACGAACAATGTGTGTTCAGGAAGAATAAAGCTTCATTGAAAATACAGGAGAAA-TAATTAC----------ACCTAGTATTCATGGGGCTGTAACAAGATACTGTTTACAGATCTCCGCTGGTTGTGAAATTGTCTATACTGAAGA-AACTGGATGTACTCTAAACTAAAAGTTGAAGGAGCATAAAACATGTGATATTGTAGTTACAAGCCACATAAAATCTTATTGGATCTGTGATAAATATTTGTGCCTTAGCAATTTTACTATTTTACAAACTACTTTCCCTGGGGGATGGTTAAAGAATACAAGGACACCTTATTTATCAGTTTTAAAGTCTAACGCTCCCCAGACCCGTG--ATGAGA----GTGTAATGTAGGTGTTCGCTAAAGTATCCAATTAATTGTTTAGTTTTGTATTGAAAAGAT-TCTTTTTTGATTAAAGTTGCTATCAGTAGGCAGATGCATCATCTGCCAGTCTGCATAAATAAAGGCAGAATAGGTCCCCAAAGTGATGTTGTTTTGAAATTGAAACCATATATTAAAGA ..:.::.xx..:....:x...:.:...:..x:.......:.-.....:.:x...:x:.x:.......--...:..x.:.::.........x.......xx.xx.::xx::.:..::xx.x:xx...:....-....x..----------.:......::....:::.........:..::......x....x..::...:..........:x..x:.:x...:.-....x:.....:x:::x..:...:::x..:.:.........:..:.:......:.......:..:.................x..x..........:...::.:::...:........:......x:.....:...::.-...:...x...x.:......x.....x......x....-.......:.x:.:::x.:::x.:x.:x..:--....:.----...:..x.:..x:::..xxx.....x.::.......x.xx..:....x:.x.x....:x.-....x::.:.x.......x.---.x...x:....x:x.x:..:.:.x..x.-:...:..x.----------------.:.:.:x.x.x....::x......:.x:::...:.x....:. 41M1D25M2D62M1D7M10D75M1D139M1I38M1I30M2D6M4D60M1D20M3I28M1I9M16I42M 391/582 67.2% 604/94230402 0.0% 44/582 7.6% 11669704 NA +3242 chr4 + 190214555 60979408 60979407 60979470 63 TATGCATATACATATATATGCATACATATATACGCATACATGTATACATATACATATATGCAT chr4 + 94230402 74593219 74593218 74593281 74593219 74593218 74593281 63 TATGCATATGCATAAACATGCATAGATAGATATGTATATATCAATTTATATGCATTTATCCAT .........:....x.:.......x...x...:.:...:..xx..x:....:...x...x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -13613811 -80616591 +3096 chr4 + 190214555 60979647 60979646 60979704 58 TTTACATGTATACATATATACATATACATGTACATATATACATATACATATATACATA chr4 + 94230402 11631479 11631478 11631536 11631479 11631478 11631536 58 TTTGCATGTAAAAACATATGCATACGCCTACACCTCCGTACATATACACATATACATA ...:......x.x.:....:....::.x.::..x.x::..........:......... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 49348168 NA +11268 chr4 + 190214555 61008980 61008979 61009229 250 GAAGAACTGCCTCACATGCTGAAGGGATGAGGATAGGCCTTTCTTAATCAGGGATGACACAAAATCAAGACATTTCAGAGCAATACCTGCAGGAAAGGATAAGTATTCTGACAACGTCAATGTCTGCAAACATCCTCTAATGCCACCAGGTAAAAAATAATCACCATCAGCAGTATCCAATGCTTATTCAGCAAGCCATGGACCTAAATGACCCTCACTCAGATTTCTGCTGTAAGATTTACAGAGATAA chr4 + 94230402 49314437 49314436 49314686 49314437 49314436 49314686 250 GAAAACCTGCCACAAACTCTCATGTAAGAGAGACAGGCCATGCTTAATCAAAGCTGACACAAAATCAAGACTTTTCAAGGCAATACCTGCAGTAGAAGATAAGTATTCAGACACTGTCAGTCTCTGCAAACATCTCTTGGTGCTACCAGGTAAAAAAAATTCCCCATCAGCAATATGTGATTTTTATTCCACTGTACATGTCACCAAATGAGCCCTTCTTAAAACTTTGCTGCAGAAATTTCTGGGGAAA ...:.x.....x..x.:x..x.x.x:.x:::..:.....x.x........::.x.................x.....::.............x.:.:...........x....x:....:.x............:::.::...:.............x.x..x.........:...x::..x:......x:.x:xx....xxx.:......x..::x..:.:.x:.:.....:.::.x..x.x.:.:x.. 250M 176/250 70.4% 250/94230402 0.0% 0/250 0.0% 11694543 NA +3096 chr4 + 190214555 61040563 61040562 61040632 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -14992634 -79237768 +3437 chr4 + 190214555 61048619 61048618 61048692 74 GCGCACATATAATCTCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTGAACCCGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:.:..:.::..........::........x.x::x...x...........:::..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -14984585 -79245817 +5382 chr4 + 190214555 61087109 61087108 61087282 174 TGTCA--GACAT--TTAATTCCTCATTTTCTCCTCCTC------TTTAAACTTCATAAAATGCCCTCTAACCAT-ACTTTAACAGAGTGATGACAGTTTAATTAGATCAAGACCTCAGCAAA-GAATAATCATGATGGTAGTGAAGACATTTATGGATTACAGTTTGAGCTTTTGCTACTATCCTT chr4 + 94230402 49325852 49325851 49326035 49325852 49325851 49326035 184 TGTCATGGACATCATGAATCCTTCGTTTTCCCCCTCTCACTTCATCCGAGCCCCGTAAAAAGGCTGGGAAGTATTACTTTAACAGTGTGATGACAGTTTAATTAGATCAAGACTTCAGTGGATGGGGGAACGTTGGGGTG--GGAGGCGGTTGTGGATTAGAGTCGGGATATTTGCTGCTATGCCT .....--.....--.x...:.:..:.....:..::...------.:::.:.::.:.....x.x.:xxx..x:..-..........x...........................:....:::.-.::x:.x.:.x:x...:--.:..:.:x..:.......x...:x.:::x......:....x.:. 5M2I5M2I24M6I30M1I47M1I17M2D44M 120/172 69.8% 184/94230402 0.0% 14/172 8.1% 11761257 NA +3951 chr4 + 190214555 61100091 61100090 61100173 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGAAGAATCGCTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:.........:::.........x.xx:x...x.:.........:....x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -14933106 -79297296 +3100 chr4 + 190214555 61140413 61140412 61140464 52 TTTTCTTACTCCCATCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 5672110 5672109 5672161 5672110 5672109 5672161 52 TTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGA .........:...x:.::.x:.:.:..:............x.:......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 55468303 NA +3041 chr4 + 190214555 61143088 61143087 61143154 67 TGCAATCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGCACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:.:........x..::........x.xx.x...x......x......:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -14890123 -79340279 +3738 chr4 + 190214555 61156707 61156706 61156789 83 TACCAAAAAAAAAAAAAAAAAAAAAGACTCCATCTTTCTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTCTGAGATGAACTT chr4 + 94230402 89365033 89365032 89365113 89365033 89365032 89365113 81 TACCAAAAAAAAAAAAAGAAAAAAGAATAC--TTTTTGGATTCTGTTGTTGTTTTTTGTTTTTCCTTTTTTTGAACTGAACTT .................:......::.:x.--.:...xxx..:.x..x..x..:...x.....::.....:...:x....... 30M2D51M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -28208326 -66022076 +3755 chr4 + 190214555 61161528 61161527 61161609 82 ATAGTGGCGCATGCTTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAACGGCTTGAACCTGGGAGGCGGGGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....:...:.--......:............:........x.xx.x...xx:........::.:..x:xx...:..:.. 13M2D67M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% -14871670 -79358732 +3788 chr4 + 190214555 61165607 61165606 61165728 122 TACTTAACCTGTCTGTGTCTCAGTCTCCTCATTTATAAAATGGAGATAAGAGTATTTTGTTAA--TATATAGGTGTTGTGATGAATAAATTAGATAT--TTCATGTAAAACATTCAGAACAGTTAC chr4 + 94230402 83501155 83501154 83501279 83501155 83501154 83501279 125 TACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA-GGCTAAATCAATTCCTGTTTATTCAGGATCTTCAGAGTGAGTAC ............x....:......:.:.:..::.:..........x.:.x....x..xx:..x--:.:.x:...:......-.:x.....:.:x.x:--..:..x:.::.:x......::::x... 63M2I16M1D15M2I27M 81/121 66.9% 125/94230402 0.0% 5/121 4.1% -22335548 -71894854 +3211 chr4 + 190214555 61199962 61199961 61200029 68 AGAAAGGGGGGAGGGAGGTGATGGAGAGTGGGAGGGGGAGAGAGGGAGGGAGGGACAGAGGAGGAAGT chr4 + 94230402 42772549 42772548 42772616 42772549 42772548 42772616 68 AGGGAAAAAGAAAGGAAGAGATGGAGTGTGGTAGGGGGAGAAAGAGATGGATGGATACAGAAAGAGAT ..::.::::.:.:...:.x.......x....x.........:..:..x...x...:.x..:.:..::. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 18427413 NA +3202 chr4 + 190214555 61199981 61199980 61200063 83 GATGGAGA------GTGGGAGGGGGAGAGAGGGAGGGAGGGACAGAGGAGGAAGTGGAAGAGAGAGAGAGAGAAAGAATGAGAGAGAGA chr4 + 94230402 11181410 11181409 11181498 11181410 11181409 11181498 89 GATGGAGAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAA ........------.x:..:.:x...........x.x.x.........x..:.:xx.x...:.:...:.:::.....xx..:...:.:. 8M6I75M 58/83 69.9% 89/94230402 0.0% 6/83 7.2% 50018571 NA +5854 chr4 + 190214555 61200759 61200758 61201422 664 GGGAGTCGAAGAAGAGAAAGAACCGAAGAGACAGCGGCGGCGGCGCAGAGCCCGGGGCCGCGCGATGAAGCTCCCACATGCCCGCAGCTGCCCGGCCCGG----CCGGCGAGCTAATCATCCACCCCACGGGCTCGGGGTTCGCCGGCCCCCGGGACGCAGCCCTCGGCGGCCGGG---------------CGCCCGCT-CTGTCTGCGCGCCCCCTCC------GTGCACCGGG------------GAAGGAGTTTGTGTGGCTCTCGCTCCGGCTGTCCGCGGAGGTTGC--GGGCTTGAGAGGGGACCCTCGGCTGGGAGAGAGCCTCGGGAGGACGAAGAGGAGGACGGTTTGGCGGAGAAGCCACCCCTGGCCCTCGCGGCT------CCCCCTAC---------CTATTCCATCGCTCCCGCTCCGAGGCGGAAAGGGGAGGACGTGGAAGAAGAAAAAGAAAGAGAAGGGGGGTGGG----GTGGGAGAACTGGATATAAAGATCGGCTGGGGGGATGGTGGAAGATTTTT----------------------------------------------GGTCTCTTCGGCAGCGTCTTTTCTTAAGCGGCGGCGGCAGCAGCAGCAGCAAGAGAAGGAGAAGCAGCCCCAGCTATGAC--TGCCGCATGTTAATAGCTGCCG--------CTGGGTCCCTCGGCTGCTGCTGGAGACAGAGCCTGACTCCGAAGTTGTGCAACTGTGGACTGGGAGAGACATTTGAACCCTCT chr4 + 94230402 49351205 49351204 49351907 49351205 49351204 49351907 703 GGGAAAAGGAAAAGGGAAggggccgggg-----tcggcg-cggcgcggcgcc---ggcTGCTAGGTGGAGC--CCGCGTCCGCGCAAC--CCAGATCCGGGCCCTCGgcgc-----tcccccgcccctcgg-ctcgccgcccgcccggctccg---tgcggccgccgccgggcagggcagcagcgccgcgccgcctgccgctgccgggccgccccctccccgcgtgtgaaccgcgccgtgccgttctgccggcggccgtg-ggccccccccccggc-gcccgccTAGCCCACCCGAGCCGGGGCTGGCGGTGTCCGCAGCGGGAG--------GAGGAAGAGGAGGAGGAAGGCTC--CGGGGGGGCT--CCGGGGAGCTGAGGGCCGGCCGCCCCCCTGCGCGCGGGAGCCTTTGTGTC-CCCCAGCCCCG--GCGGA---GTGAGGGGCCGGGGGCAGGGAGCGGATGCGGAGAGCGGCTGGTGCTGCTGGAGGA--GGAAGAGAAAA-------GGGGGATGGTGGAAGATTGCTCTCtttttttttttttttttttttttttcccttcctttttttCGGGGGTCTCTTCGACAGCGGCTCCTCGTCCCCGGCGGCGGCTGCAGCAGCAGCAGCAGCA-GATAGGCAGT-----CGATGACCGTGCCGCATCCGGATCGCCCCGGGCTGAGGTGCGGGCTCCTCGGCCACCCC-----------CCCGGCCCTGATGCTGCCC--------ACCGGAAGGAATGTACAAACCCCCT ....:xx.:.:...:...:.::...::.-----x.....-......:.x...---...:..xx.:..:...--..:.:.x.x....:.--..x.::....----:.....x-----..x:..:....x...-....xx.::....x.x.:...---:..:...x:..x...x.:..---------------....:..:-...:.x.xx..........------...x....x.------------.xx..x.x::...-...:.:.x.:.....-.:....xx..x:::.--.:..:x.:.xx..x:x:x..x..x.x.:...--------.....x..:........x..:.:--...:.::..:--..xx..xx..x:x...:------......:.---------.:x..x::..-.:..x..:...--.....---.x....:xx:..::.x..::.:x.:.x.x.:..:.x..:x..----.:x....:.--...x:x:..:.-------..................x:.----------------------------------------------..........:.....x..::..x.xxx..........x............:x..x.-..x.:....:-----.x.....--........x:x:..x..:x.x.--------x:...::.......::.:x.-----------..:.:.:.:..x.:..:x.--------..:..:..::.::.x::.....:.. 28M5D6M1D12M3D16M2D15M2D10M4I7M5D15M1D21M3D20M15I8M1I19M6I10M12I13M1D15M1D15M2I31M8D23M2D10M2D17M6I8M9I10M1D11M2D5M3D42M4I9M2D11M7D21M46I57M1D10M5D7M2I22M8I20M11D19M8D25M 395/588 67.2% 703/94230402 0.0% 191/588 32.5% 11849554 NA +13160 chr4 + 190214555 61210296 61210295 61210690 395 GACACTCCCTCCTGTTTGATCAGCTTGTGTTGGTGTTTACGCATCCCGCAGAGGCAGAGTGTGTTACTATTCAGGACAGCCCCAGTGGCTCCACAGTAGCCTGAGCCTGTGAGAATAGAGGAGAGACTCAAGCCCAGTTTTTGATGTTCTGCTTGGGTGGGTAACCTGAATACTAAAATGCATTCCATTGAC-GCTGACCCTGTAAGAGGGTTTTCAACAGTCTCCTGTTTTGTTTTGATTTGGTTTGTTTCCCCCTTCCCCATTTCCTTTTTCTCAAACTCTTCCAAAGACTTTTGAATAAAAGG------------AAATGGTTCTGACTGATGGTCATCTTTTTGTATGAGATTTTATTTCTGGCAAGAATGGA--AGGGT-------------TCAACTGTTTTTCATTAACACCTTTT chr4 + 94230402 49358729 49358728 49359132 49358729 49358728 49359132 404 GACCCCTCGTTGCATTCCATGGGCTGGTGCTGCTGCTTGTGAGCCCTGCAGAGGCAGTGTGCCTTGTTGTTCCACACCACATCGCACACCCCGTGCTGGCCTGAGCCTGTGAGAATAGAG-AGGGACCTCAGCCCAGTTTTTGATGTTCTGCATGGGTGGGTACCCTGAATACTAAAGTGCATTTCACTGACAGCTGACCCTGTAACAGGATTTTCAATAGCTTGCTTTTTT----------------CTTCCTTTTTTTTCTCTTCCTTCCCTCAGAGCCATTCCAAAGACTGCTGAGGGAAAGGAGGAGAAGGAAAAAAAAATGCCCATCGA-AGCCATCTCTTTGAAT-AGGTTTCACTGTTGGATAGAGCTGAGGAGGGTTTAGGAGATCATGTTAACTCCTTTTCTTTTACACCTCTT ...x.::.x.:x::..:x..x:...x...:..x..:..::.x::..:..........x...:x..::.:...x:x..x:.x:.:xxx:.:..:::x.:......................-..:...::x......................x..........x.............:......:..:....-.............x...:.......:..::.x..x....----------------:....:::..:::.x:......:::::x:.:.:x...........x:...:x:.....------------...x::.x.:x.::..-:.:.....:....x..-..:...:.:.x:...xx...::x..--.....-------------.:....x:.....x..x......:.. 120M1D71M1I39M16D58M12I16M1D16M1D25M2I5M13I26M 262/376 69.7% 404/94230402 0.0% 47/376 12.5% 11851567 NA +21286 chr4 + 190214555 61212740 61212739 61213176 437 TTAGTAGAAGGCCTAATTAGCAGAAATCTTATGTACAAT-GACCTTCCTTACTATTGCAA--ATCCTCAAAGAAGAAGGAACACTAAAAATTAGTATGCTGTCAACATTTT-TTTTTATGATTTGATGTTATTAAGCAAACTTTTGCGAGTATTTCTTTTTCT-GGTGCGTTTGATTAAATGTGTGATCTTATCTTGGTGAAATAGCCTGCTGGGCTGCAGACAGTAGTGTTCAGAAATGAAATTTGCTTAGAGCCTCTGAACAGACATTTATTCAATGAGACCTTTCTTGAATAATAGATGATAGTGAGATAACAATGGTATGTGTATGTGTGTTT----TCTTCCTTGAATTTAGGGGATGTTGAGCTAGAGCAAC-------AACAACAACAGAAGTAATGGGGTATGAAAGAAAGCATTAGATTTATATAT-GAGAAATTAACCTACTTT chr4 + 94230402 49361556 49361555 49361999 49361556 49361555 49361999 444 TTACCAGAAACCCTAATTAGAAGAAATCCCATGTACGGTTGACCTT---GACTATTGAGACAACCCTCAAAGAAGAAAGAGTACTAAAAATTAGTATGCTGCCAGAGTTGCACTTTTATTATTTGACGTTATTAAGCAAACTCG-GTGTGTATTTCTTTTTTTTGAAGCGTTTGATTAAATGTGTGATCTTATCTTGGTGAAATGGCCCGCTGGGCTGCAGACAGTGGTGTTCAGAAATGAAATTTGTTTAGAGCCTCTGAACAGACATTTATTCAATGAGACCTTTCTTGAATAATAGATGACAGCGAGATAGCTGTGCAACGTGTTCTTGGGTTTGGGCTTTTTTAAGAATGTGTAGGGAGTTGCAGTGTTGCAATGGGAGGAGAAGACAACACAAGT------GCACAGAAGTGAGAATAGAGTGTACGTGTAGAGAAATTATCTTGCTCT ...x:....:x.........x.......::......::.-......---x.......x:.--.:.............:..::...................:..:x:..x:-:......x......:...............:x-.:.x............:.-.:x.....................................:...:.................:....................:.......................................................:..:......:.x:..xx.:....x:x..x....----.:..::xx....x.:x:..:x....x:x.:xx....:-------:.x:......x....------.:.:::...x:..x..x:::.x..::.:.-.........x.:.:..:. 39M1I6M3D11M2I49M1I32M1D18M1I173M4I37M7I15M6D29M1I18M 338/427 79.2% 444/94230402 0.0% 27/427 6.3% 11851184 NA +3721 chr4 + 190214555 61229777 61229776 61229849 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGGATTACTTGAGCCCTGGAACTTGAAGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.:x.x.:.x:......:...x.:.:...x::....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -14803428 -79426974 +11378 chr4 + 190214555 61237935 61237934 61238199 265 GAGATGCATAAAT-------TGACACTTGCTCTCTTGCACTCCTGAGTTTGTGCTGT--TATCAATTCATTGGAGGCCTACAACTTTCTCCTTTCAGCTGATTGATTTTGAATTT---TTCAAACTGATTAATGTCTTCATTTGAATGGTAATGTTGATTTTGCAGAAGATGTGATCTTTTAATTAGCAGATGCTGAGATTAGCATTAGGGTTGAACAGTAATTAGCATTTGTTCTTATAGTACAAGAGCACAAACTAAGTACTGCAGCAAATAGAA chr4 + 94230402 49374306 49374305 49374577 49374306 49374305 49374577 272 GATATGCATGGACAATGTAGTGACATTTGCTCTTGAGTACTCCC-AGTTTGCACTTTGATATTAATTGAACCAAAGACTAAAA-TTCCTGCTTT--GTTGATTGATTTTTTCTTTAATTTTAAACTGATTAATGTTTTCATTTGAATAGCACTGCTGACTCTGCAAAAGATGTGATCTTTTAATTAGCAGATGTCAGGATTAGCATTAGTGTTGAGTTGTAATTAGCATTTGTACGCATAGCAAAAGA-CCCGAGCTCAACTTGGCAGCAAGGAGAA ..x......::.:-------.....:.......:xx.:.....:-......::..x.--...:....x.x:x:.:.x...x..-..:..x....--.:...........xxx...---..:..............:...........:.:.x..:...:.:....:...........................::::............x.....::x...............x.x:....:.x....-.x.:.:..x.::x:x.......:x.... 13M7I24M1D12M2I24M1D10M2D19M3I130M1D28M 199/260 76.5% 272/94230402 0.0% 17/260 6.5% 11863629 NA +3033 chr4 + 190214555 61238443 61238442 61238489 47 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCACGTGTGTA chr4 + 94230402 79265519 79265518 79265565 79265519 79265518 79265565 47 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCA .............::........xx...:.:.::..:........:. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -18027076 -76203326 +4866 chr4 + 190214555 61243795 61243794 61243954 160 TGAATGAAACCCAGGGTTGATTTTAATACGGTCATCATAAAATAAGTTAAAGGACATTATTTCATTGTGCAATCTAATAAACCTAACCACA-------------CTATTAAGATTCAGTTAAATTCAATTTTACTTTACTACTAAAAATATTTTCATGAAATACTATCCTTAG chr4 + 94230402 49377012 49377011 49377181 49377012 49377011 49377181 170 TAAATACAGCATGTAGTGGAGTGTAATAC---TATCATAACATAATTGAAATGATATTATTCCAATGTACAATTCAATAAAACTAACCACAGTAGTGCAGTTATCGATTTAAATTCAGTTAAAAGCAATTCACATATTCAGTTCAAAATATTTCTGATGAATATCAGCCCTGG .:...:x.:.x::x:..x..x.x......---:.......x....x.x...x..:......:..x...:....::......x.........-------------.x...x.:...........xx.....:xxx.x.x.x::.x.........:::xx:....::.x..:.:. 29M3D59M13I69M 107/157 68.2% 170/94230402 0.0% 16/157 10.2% 11866783 NA +6412 chr4 + 190214555 61248553 61248552 61248859 307 TTGCTGACAAAAGGGATGAAATGG------TTAATGGCTAGAACATGTA-GGCAAAATCTTAAATGGATTTAAAATTAGCTATCTTATATTTGTCTAAAATACTCTTTATTCCTTG--------------------AGACACCAAGTTTT--CTTTTAAAAGCACATCTAATCAATTTCAAAGTGAAGAA--AAATAGAGTCCGAGCCAGTTTTGAAAATTATTTCTCCTTGAAATGTTCAGAGTGCTGGAATTTATTTTACAGTTCCACC-TAACCAGGCTTCTGGACTGAAAGGAAGGGAATGAATAGTGTCTAAATCTGCTTTAGGAGAGAGCTTG chr4 + 94230402 49378531 49378530 49378865 49378531 49378530 49378865 335 TTGTTGATGAAAATGATGACAAGAAACCAACTGATAGCTGCAA-GTGTATGACAAAAGCTT---TACATCTGAAGGTAGATTCTTTGCATTCAACTGAATTTCTCTTTTTTACCTGTTTACTTTATTCATAGAAATGCATACTATTTTTTGTCTATCAAAAGCATATCTAATTTGTTTCAGAGCAAGGAAGGAAATAAAACTGGAGCTTGTAGTGAGCATTAATTCTTCTTGAAATGTTCTGAATGCTTGAATTTTCATTTCATCTCAGTTATAAGGAAGGCTGTACCCTGAAACCCGAGAAATGTTCAGTGGCTACACCTTTGTGTGGAGAGACCTTG ...:...::...:x.....x.x.:------:.:..:...:x..-:....-.:.....x...---.:x..:.:..:x...x.x::..::...::x..:..x.x......x..x.:..--------------------:x.:..:.xx....--..x.:.......:.......:x:.....:..::.:...--.....:.:::x....:x..xx...:x....x....:............x..:....x......x:x..x..x:..x:::-...xx.:.x:.x.:xx......xxx::.:....xx:....x...x.:..x:x.xx.......x.... 24M6I13M1D5M1I11M3D52M20I14M2I38M2I79M1I67M 197/303 65.0% 335/94230402 0.0% 36/303 11.9% 11870022 NA +3058 chr4 + 190214555 61274728 61274727 61274787 60 AGCTTGGGCAACATAGCAAGACCTTGTCTCTACCAAAAAACAAACAAACAAACAAAAACT chr4 + 94230402 57006207 57006206 57006266 57006207 57006206 57006266 60 AACTTCAGAATCCTAGTAACAGCTTATTTTCATTAAAAAACAAACAAGCAAACAAAAACT .:...x:.x.x.x...:..x.x...:.:.::.::.............:............ 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 4268521 NA +3171 chr4 + 190214555 61291556 61291555 61291653 98 CTATATATATACATATATATATATATACATATA----TATATATATATATATACACACACATATATATATATATAAAATATTTATTTATATATGCATGTATA chr4 + 94230402 76376868 76376867 76376969 76376868 76376867 76376969 102 CTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTA ..x..:....:..x.x...:..:...:....:.----..:x.:.:....:...::::..:...x.:.x...x.x.....:.x:x.:.x.:.:...x...x.. 33M4I65M 64/98 65.3% 102/94230402 0.0% 4/98 4.1% -15085312 -79145090 +3018 chr4 + 190214555 61294885 61294884 61294941 57 ACACACACACACACACACTCACACACACACACACACACACACACACACACAGTAGTC chr4 + 94230402 46140856 46140855 46140912 46140856 46140855 46140912 57 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTC .:.:.:.:........x......:........::::.:.:...x..x:....x.... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 15154029 NA +21854 chr4 + 190214555 61298290 61298289 61298681 392 AAGGGAATAGAATTAGATTAATTTCATTTATACCATGTTAACCAGCCTACGTTTGTGG-TCCCTCTAGTTGGG----CAATTGTGCTGCTTGCTCAATTGTGCCGGTAGAGATAACCCTTAATTCCTC-CTTATCCAGTTTTTGAATCATTTCATTAAACAAAAGCCTTTTTGAGTCTTCTTTTGTTGCTGAGAACAAATGATTAGATTTTAGGAACTGTAGCTACTTTTGTTATTCACAAATTCCAGAGCCATTCAAAA---TTTATCATTCACATTCTCTGCTCTG-CACACAATCAGTCATTATGTCAGCAGCTGCCCAGGGAGGCTTACTTCAATTCATTCAGCCAAATAATGACGATCAGGACAACCATTTCTACATTAAAAATAATAATAAAATAA chr4 + 94230402 49406842 49406841 49407236 49406842 49406841 49407236 395 AAAGAAACAGAACCGTAGTAATTCAGTTAACAATACGTTCGACAGAATACATTCATAACTCTTTCTACTTAGGGACACAATT----TGCTTGCTGTATTATGCCAGTAGAGATAACCCTTAATTCCTTTCGTATCCTGTTTTTGAATCATTTTGTTAAACAAAGGCCTTT--GAGTCCTCTTTTGTTGTGGAGAACAAATGGTGAGATTTTGGGGACTGTAGCTACTTTTGTTATTCACAAATTCCAGAGCCTTTCAAAATTCTTCATCATTCACATTCTCAGCTTCACCACACAATCATTCATTATGTCAGCAGCTGCCCGGGGAGTCTCACTTCAGCTCATTCAGCCAAATAATAAGCCCTGGGACAACCGCTTCTGCatt-aaaataataataaaataa ..:.:..:....:::x.x.....:x:..x.:.x:.:...x:x...xx...:..::.::-..::....x..:..----.....----........xx...:....:......................:-.x.....x...............::.........:......--.....:..........:x...........:.x.......:..:.....................................x.......---..:...............x...:::-..........x.....................:.....x..:......::.................:.xxx:::........::....:....-.................. 58M1I14M4I5M4D42M1I41M2D88M3I25M1I94M1D18M 316/385 82.1% 395/94230402 0.0% 17/385 4.4% 11891448 NA +4420 chr4 + 190214555 61304011 61304010 61304160 150 TGAACATGTTTATTCTCTGACTTGGGTAGCAGCTGTGACTGCTGTGCACAGATGTGATAGCACTCCAGGTAAATGAGAGATACAGTGTTGCTTGTGTAGCAGCTGCTGATAATTGTAGAATATTTGTGCAGTAGCCCACCTATGTTGCTT chr4 + 94230402 49410616 49410615 49410747 49410616 49410615 49410747 132 TGAGCACCCCTTTTCCCTAACAAAGGCAGCAGATGCAGCCA-----------------AATACCCCAGGTACAGGAGAGCTGCTGTGCTGTCTGAGGAGCAGCTGCTGATAATTGCGGGAGATTTGTACC-CATCTCTCCTGTTTTGCTT ...:..:x::.x...:..:..xx:..:.....x..:::.::-----------------.::..:.......x.x.....x.:.x...:..::..x.x..................::.:.x......:.x-:.x.:.x...:.x...... 41M17D72M1D19M 89/132 67.4% 132/94230402 0.0% 18/132 13.6% 11893395 NA +3063 chr4 + 190214555 61318194 61318193 61318263 70 AAAAAAAAAAAAAAAAAAAAACACAAAACACACACACACACACACACAAAAGAAAATATATAGGATAATA chr4 + 94230402 5860127 5860126 5860196 5860127 5860126 5860196 70 AAGAAAATGTATAAAAAAAGATAGAGAAATCACACACACACACAAAAAAAAGGAAAAAAAAAAGATCATA ..:....x:x.x.......:.:.x.:..xx..............x.x.....:...x.x.x.:...x... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 55458067 NA +3125 chr4 + 190214555 61318194 61318193 61318258 65 AAAAAAAAAAAAAAAAAAAAACACAAAACACACACACACACAC-ACACAAAAGAAAATATATAGGA chr4 + 94230402 37755103 37755102 37755168 37755103 37755102 37755168 66 AAGAAGGCAAAAGGAAAACAAAACAAAACACACACACACACACAAAATGAAAAAAAAAGCAGAGGA ..:..::x....::....x..x.....................-.x.::...:....x::.x.... 43M1I22M 49/65 75.4% 66/94230402 0.0% 1/65 1.5% 23563091 NA +3279 chr4 + 190214555 61318197 61318196 61318249 53 AAAAAAAAAAAAAAAAAACACAAAACACACACACACACACACACAAAAGAAAA chr4 + 94230402 45036940 45036939 45036992 45036940 45036939 45036992 53 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAA ...........x.....x..x......:.x.x.:...........x..:.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 16281257 NA +17179 chr4 + 190214555 61328764 61328763 61329143 380 TGGCCTCTTTTTATACTAAGATGGTCTCATTTGGTTTCGTTTG-----TTTATTGAATTCTCCTACTCC-TGCTCCTGCCTTGTTGTGCACTGT----TCTCCATAATCCCTCAAGCTGAAAATTGATCTCCATTCAATAGTGTGCAGTGATTCGTCCTGCTCTGTAATCAGTTCCACTATGTGAATGAAATTCATCATGGGAGACTTGATTACTATCTCTGTTAGGACTGACCTGGTTGAAAGGACTGTCAAGTGGCCTGAAATTTGCATGCTTTGGATGTGTGCCATAAGGAATTAGT--TGCTCAACAAAAAGAGCTAAATTGAGCAGACATGAAGGACTGGTGTTTACTGA-------------TTTTCTCCCTCTTCCTTCTGAGCAGCTAGATGAAAGG chr4 + 94230402 49416714 49416713 49417110 49416714 49416713 49417110 397 TGGCATCTATCTGTGCGA----GCTTTTATTTGACATGGTTGGGTAGACTTATTGAATTC--CTACTCCCTGCTTTAGTTTAGCTGTGTACTGTATGTTCTCCACAATACCTCAAGGTAAAAATTGATCTCTGGTCAATACTGTGCAATGATTCGACCCACTCCATAATCAGCACCGCTCTGTGAATGAAATTCATCGTGGGAGGCCTGATTATTGTCTCCACTAGGACTGACCTGACTGAAAGGGCTATCAGACTGTCTG-AATTTGGACACTTTGGACAATTGCCATCAGGAATTACCCATGCTT-CCAGAAAGGGCTAAATTGAGCAGAGATGAAGTGCTGGTGTTTATTGATTCCTTTTTTTCTTTTTTTTCTTCCTCCTCCTGACTAGGTAGAGGAGAAG ....x...x.:.:.:.x.----.x.:.:.....::x.x...x.-----:...........--.......-....::x.::.x.:....:.....----......:...x.......x.:............::x......x......:.......x..::...::.......:x..:..x.................:......:.:......:.:....:::.............::.......:..:...:::x.:...-......x.::.......::xx......x........x:--....:-x..:....:...............x......x:..........:...-------------....:.:.:..:....:....x:..x....x..:.:. 18M4D21M5I12M2D7M1I24M4I163M1D38M2I5M1D47M13I37M 285/372 76.6% 397/94230402 0.0% 33/372 8.9% 11912050 NA +8382 chr4 + 190214555 61348546 61348545 61348836 291 TACATTCTTTGGAAGGTGGAAGCATAATTCTCAAATTAAATTTT-TACAAGACAGAATTAAGGTTATTTAATTGGTGAAAATAGATTTCTACAATACAGCAAGCCTGAATGTGA------GAAAAGGACTAGTCAAAGGTGTAAAATATAGTTGATATAATAATGAATTTAAATACCTTAGTAAATCATGACTATACCACTTTATTAGACACTGTTTCATAAAC--TGGAAGACCTGACAATCTGATAAATCTGCCTTTTAATATTTAGTGGTTAATATTTTAAATAAATTATTTCTTTG chr4 + 94230402 49430759 49430758 49431048 49430759 49430758 49431048 290 TGCAAACCTTAGGAGGAGATAGCA-----CTGAAATTGCCTTTTCTACTGGAAGCTGATAAGCTCATTACATATGCAAAAAAGAATGTGTATATCAGGCAAAGCCAATATATGACTTGGGAGTGAAGACCAGTCTGAAATACAAAATATA-----TGTAACGATGAATTTAAACACCTCACTAAATCATAGCTGTGCCATTTTATTAGACATTGTTTCATAAACTATGAAAGCTTTAGCTATCGTATAAATCTGTCTCTTAATAGGCAGCAGTTACATTTCTTTATAATTTATTTCTCTG .:..xx.:..:.:...x.:x....-----..x.....:xx....-...x:..x:xx:x....x.:...xx..xx.::....x::..x.x..:.x:.x:xx.....x:x..:...------::x:.:...:....x:.::.::........-----.:...::...........:....:.x........::..:.:...:...........:............--..:...x::.::.x...xx.........:..:......xx:..::....xxx..:.xx....x........:.. 24M5D15M1I69M6I30M5D69M2I74M 188/281 66.9% 290/94230402 0.0% 19/281 6.8% 11917787 NA +3248 chr4 + 190214555 61362313 61362312 61362362 50 GAATATTTGAAAATTATATATATATATATATATACACACACACACATATA chr4 + 94230402 74671058 74671057 74671107 74671058 74671057 74671107 50 GAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACA ......x::.......xx.:..............:...........:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -13308745 -80921657 +16425 chr4 + 190214555 61366223 61366222 61366536 314 TGAAAAGGTTCTAGATTTCTATAAAGCCATG-ATTTTATGGAACATTTAAGTGGCAGTAATTTGGCTGGCTTTACCATCAGC-TGCATAAACATCAATGTCTATTGACACATTATAAAGGCACAAGTGGAGTATAGCCTGACATCCTGATGCCTGTGCTGAGGTTTAATAGTGCATCTGTATCACTTTTCCCAGTGGGAAATA--ACAAGATGTTGCATTGTAATTTTTTACTACTGTATAATAAAATATAGCCGTAATAAATAGCATCTAAGCAAATAA---AGCGGATT-TGGACCAAATCCATTTTGCCTTCATCACTT chr4 + 94230402 49437851 49437850 49438169 49437851 49437850 49438169 319 TGGAAGGGTTCTAGGCTTGTGTAGTGCTAAGCATTTTATGGCACGTTTAAATGTCTATAATATAAATAGCTTTACCATCAGAAGGCATAAATGTCA--GCCTATTGACACATTATAAAGACACAAATGGAATGTAGCCTGGCAGACCGGTGCTGGTTTTGAGATTTAATAGTACATCTGTATCATTTATCCCAGTGGGAAATAGCACAGGATGTTGCCTTGTAATTTTTTACTACTGTATAATAAAACTTAACCATAATAAATGTTGTCTAAGCAAGTAAGGCAGCAGATTCTGGATTTCATCCAGTTTCCCTT-ACCACTT ..:..:........::..x.:..:x..:.x.-.........x..:.....:..x.x:....x.::x.:.............x-x.......::...--.:...................:.....:....:.:.......:..xx.:.:...:x..x:....:.........:...........:..x...............--...:........x.............................:x..:..:........:x::.........:...---...:....-....::xx.....x...x....-.:..... 31M1I50M1I13M2D105M2I75M3I8M1I22M1D7M 249/311 80.1% 319/94230402 0.0% 11/311 3.5% 11928372 NA +3385 chr4 + 190214555 61380000 61379999 61380205 206 AACCTCAGAGAATTGTTTTAAAGGTTAAATGTGAATTTAACTTGCCAAAAAAGTAAGAATTTTACATATAAATAGAAAATGTATGTAAAT-TATTTATACATATATCTATTACACATAGTAATATAGTAATATATTTTATAAATATGTAAAAATG------TGTGTATGTATATGTATATGTATAGACACAGACTCACATTTTCTGTGTGTGT chr4 + 94230402 21109138 21109137 21109325 21109138 21109137 21109325 188 AATGTCAAAGCATCGGTGTATGGGCTGAGCGTA----------TCTGAAAAATAAGGAAATTTGCTTATACAT-GTGTGTCTCTGTGGGCGTATTTATATGTAC-----TCACATATACTCGTGTA---------CCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGT ..:x...:..x..:.x.x..x:..:.:.::..:----------x.::.....xx.:...x...:.x....x..-.x:x:.x.x...::::-........::..:-----.:...:...x.x:.:..---------::....x:......xxx...------...:.....:....x.....:..:x....:::x.:...x........x.... 33M10D30M1D16M1I13M5D17M9D20M6I52M 118/181 65.2% 188/94230402 0.0% 32/181 17.7% 40270862 NA +4826 chr4 + 190214555 61383098 61383097 61383196 99 TTAAATATTTTTT-TCTTTTTTTTCAGAAATGTTTAATTTGGTAAATTGGAGGAAAAAAACATGGATTTTTAGCAATTGAAGAGCAAATTAAGGTAATTA chr4 + 94230402 49445172 49445171 49445271 49445172 49445171 49445271 100 TTAATTATTTTTTCTCTTTGTTTCCAGAAATGCTGAATTCAGTACTCTGCAAAAATAGCGTATGGATTTTCAGCACCTGAAGAGCAAGAAAAGGTAATTA ....x........-.....x...:........:.x....::...xx:..x.::..x.:x::.........:....x:..........:xx.......... 13M1I86M 75/99 75.8% 100/94230402 0.0% 1/99 1.0% 11937926 NA +3019 chr4 + 190214555 61385843 61385842 61385896 54 TGTGTGTATGTATATGCATATGTATAGACACAGACTCACATTTTCTGTGTGTGT chr4 + 94230402 21109272 21109271 21109325 21109272 21109271 21109325 54 TGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGT .....:.....:....x.....:..:x....:::x.:...x........x.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 40276571 NA +13600 chr4 + 190214555 61389577 61389576 61389882 306 GCTTTTTTACCCCTTTTTTTTATAGAAAATTTAAAAAGAAGTTTTGGTTTGCTATGAGATTATGTTTTCTAATTAATTTCAAAACCACAGTCAG------AATGTGTGGGATGTAAAAACTGG-CTATGGG-CAGGGTAAAAGCACATTAATTATTCAGACAGTCATTCCTGCTTATTCCTCTCTTGGAGATATCGTGGCTGTCAGAATCTGTCAGCTGTATATAGTTAGTGCCCTTCAGAATTTACATGCATAAATGGTGACCTTTAGAAATCTACATAAAGATAAGTCTGGCA-TTCGAATGATAGCTGCCAG chr4 + 94230402 49448229 49448228 49448521 49448229 49448228 49448521 293 GCCTTTTTCTCTTTTTTTTTTAAA--------------------TGGCTGGCCATGACATTAAGATTTCTAATTAATTTAGAAACCACAGGCAGTTGAAGAGAGTGAGCAATGTAATAACTGGGCCATGGGGCAGAGTAAAAGCACATCAATTATTCAGGCAGTCGCTGCTGCTTATTCCCTTCCCGGAGCTGCGCTGGCTGTCAGTGTGTGTCAGC--TATGCCGCTAATGCCCTTCAGAATTTACATGCATAAACAGTGGCCTTTTAAAATCTGTGTGAGGATAACTTCAGCCTTTTGAACGATGGCTGCCAG ..:.....x:.::.........x.--------------------...:.x..:....x....x.x..............x:.........x...------.:x...x.x:......x......-.:.....-...:............:..........:.....::.x...........::..::....x.::xx..........x:.x.......--...::x.:..:..........................::...:.....x:......:::.:.:.....x.:::..x-..:...:...:........ 24M20D50M6I23M1I7M1I85M2D76M1I19M 221/284 77.8% 293/94230402 0.0% 31/284 10.9% 11941348 NA +8002 chr4 + 190214555 61394694 61394693 61394915 222 AAGAAATTGGATTGCTTGG--------TTTGGCTTACTGCTGCCTTGAATGTTCTGAGAACAATAATGCAATTAGCTAAAATGTTTATTCACAAAATTTAATTCCTGGGGAGTATATTCTCAAATTGCCTCTTACAAGTGTAATGGAAGCAAGCAGTTGTTTGTTGGCTTTGCTGCCAAAATTCTGAATGGCTAG--ATTTTTATAAAACTTGGGTATAATGTATGTATAAT chr4 + 94230402 49449436 49449435 49449639 49449436 49449435 49449639 204 AAGAAACTAAACTCCGTAGACAAATGCTCTGGCTAAATGGGGCCTTCACTGCACAGAGAACAAGAATGCAATTAGCTGAAATGTTTGTTTACAAAATCTAATTCCTGGGGAGTATCTTCTCAGATTGTCTCTTCCA--TATCATGG----------------GTTGTGTTTGTTGCCAG----------GGCTTGCAGTTTTTGTAAAGCTTGGCTGTAGCACATACATAAT ......:.::.:.x.x.:.--------.:.....x.x..xx.....x.x..:x.x........x.............:........:..:.......:.................x......:....:.....x..--.:.x....----------------....xx....:.....:----------....x.--:.....:....:.....x.:..::::..::..... 19M8I109M2D8M16D17M10D6M2I35M 150/194 77.3% 204/94230402 0.0% 38/194 19.6% 11945258 NA +19048 chr4 + 190214555 61429687 61429686 61430425 739 AAGAAATCCAGATAATAACTTCCCTAAGTATTAGATATTCAGAGACTCTAAAGTTATTATAAATTGCAGTTTAGAAATATGGATGGGAAATAGTCATGTTAATTAGGAAGATACACTTGGAAATGAA--GTAATTTTTTAA-GGTAATTTCCTTGGTGAGTGCTTTACTGATAGCTTGAATTTATTTACCACACAGATGTCATAATAAAATAGGTATTTATGGGGTAGTTTTTAATTAGAAATAATGGCTTCTAGAGTTAAAGTGATGAATCATTTTATCCATATATTGGCTTAAGTGGCCCTAATGAAAGATGATCCCATCAACAGTTTTGGACTATCCTAACTGAATGCTTTATCTTCTAAAACATAGCAAAATCTGTAC----TGCATT------------TCAAACTCTA----CATCGACAATGAGATACAAAGATAATCAAAATATTAACCTGTGCTTTGGAAACAAACAGGT------------AATGTTGCCTTTCATCATAACTGAAGCACTTTATAAATTAATAGAAAAATATCCTATATGGCTACATATTTCTAAATGTAAATGGGATTGGAAGAGAATCAACCAACCTTGTCAAATTTA---TGAGCATGAGT-GCAATAGTCTAGCTGATGAGATGGCTTTGCAGGTATGAAGGATATGTCATTC--AGAAGGACACATTGATTCAAGTTAGTTCTTTTCTGTTTGTTTGCATTTAATTATGTCCTAAAAGGATTGGTATAGAGAATAAAATATACATGAACTAGCA chr4 + 94230402 49472784 49472783 49473521 49472784 49472783 49473521 738 AAGAAGTTATTTTAATGGTTTTGTTGAGAATTGTGCTTTCAAAGACTCTTAAATTATTGCAGACTGTACTGCTGGGATGT--ATGGGAAACAGCCATTTTAATTAGGAAGATACGCTTGGAAATGAAAAGTCATTTTTTAAAGGTAATTTCCTTTGTGAGTGTTTTACTGACCGCTTGAATTTATTTACCACACAGACCCAGCAATAAAATACGTATTTATGGGATAGTTTTTAATTAGAAATAATGACTGGTAGAGTTGAAGTGATTAATCATCTTAACCATATA--GGCT---GTGG---TAGTGAAAGACAGTTGCACTGACAATCAGAGAGTGATCTCACTGCGTGGTTTGTCCT-TAGACAACACCAACACCAATGCAGTTTGCAGTTTGACTTAGAAGTCAGGCTGTAGTGCTCTTGCAGACCTGGTGCATGGATGACCACTGAAATCTCTT----TCTGGAACAAAGTAGGTTTTGGCCTTCTGGATGTCACTGACATTCATAAGTAAGGCTAATTAAAAAATAATCAAGTGATG--CTATTT-------TATTTCTGCTTGCAAGTAGTGCCTGGAGGGAGTAAACCAGTGATGACAGATTTATGGTGAGTATTGGTGGCAGCAGGCTTGCTGCTGAAATGTTTGGGCAGATGC-AAGTGCATATCATTTTGGGAAGGAT-CACAGATTTTAGTCAGTCTTTTATTCCTTGGTTA----------------GGAAGCATGGGGATAGAAATTAAAAGAAACCCAACTTAACA .....:.:xxxx....:::..:x:.:..x...:x::x....:.......x..:.....::.:.:..:.x.x:x.::..:.--........:..:...x................:............--..x.........-............x.......:........:x........................:x:x::.........x...........:......................:..xx.......:.......x......:...x.......--....---....---..:.......:::.:x..:::...:.:xx:..x.:x:..x....x:..x...:..:.-..:.xx.:.x...x.:.x:.:.----....x.------------...::..x..----:x.:.xx:.:xx.:.:..x:...:.:..xx:x.x.xx.:.----.:.....xx..::....------------:....::.:xx:xx......x.:.:..xxx...x...x....x:.:x:..:--....x.-------.......:xx..:..:.:.x:::x.:..:..:.x.....::xx..x..:.....---....:..x:..-...::..x..x....x...:...x:.xx....:.::-...x::..:.....:--:......:-..:x....:x...:...::...x:.x:...x..:----------------::...x..x..x.....:.x.....x.x..x::.x:..:.. 80M2D45M2I12M1I144M2D4M3D4M3D57M1D22M4I6M12I10M4I40M4D17M12I51M2D6M7D54M3I11M1I36M1D15M2I8M1D34M16D41M 477/697 68.4% 738/94230402 0.0% 83/697 11.9% 11956903 NA +3922 chr4 + 190214555 61432542 61432541 61432663 122 ATAGCCTTTATAGATTTCTTTTC------TTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697112 63697111 63697239 63697112 63697111 63697239 128 ACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x......xxx.:..:....------........::....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:......x... 23M6I99M 79/122 64.8% 128/94230402 0.0% 6/122 4.9% -2264570 -91965832 +3942 chr4 + 190214555 61432547 61432546 61432701 155 CTTTATAGATTTCTTTTCTTTCTCTTCCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGAATTTC-----ACTCTTGTTGCCCAGGCT chr4 + 94230402 63697108 63697107 63697274 63697108 63697107 63697274 167 CTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAAAAGCTGTAGACAATTGTTGCCTATACT ..::.:...:..:x..:..:..::....x---..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.:.::.......:..::.....x..x.::x....xxx.-----..xx........:.x:.. 29M3I59M4I49M5I18M 97/155 62.6% 167/94230402 0.0% 12/155 7.7% -2264561 -91965841 +3550 chr4 + 190214555 61432555 61432554 61432667 113 ATTTCTTTTCTTTC------TCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTT chr4 + 94230402 63697121 63697120 63697239 63697121 63697120 63697239 119 ATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:..:.:.....------.:.::....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........::.....x... 14M6I99M 71/113 62.8% 119/94230402 0.0% 6/113 5.3% -2264566 -91965836 +3067 chr4 + 190214555 61432558 61432557 61432676 119 TCTTTTCTTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 32895602 32895601 32895724 32895602 32895601 32895724 123 TCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTTATACA ...::.......::::x...:..:..x..x....:.x.x.:..::x:.xx....x..----.:..:.:x::.:.:...x:.x......x.....:......xx..:x:x.x...::.x.x... 57M4I62M 73/119 61.3% 123/94230402 0.0% 4/119 3.4% 28536956 NA +3353 chr4 + 190214555 61432558 61432557 61432690 133 TCTTTTCTTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT----TCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGAATTTCACTCTTG chr4 + 94230402 82976640 82976639 82976776 82976640 82976639 82976776 137 TCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCATATTAAATCACCTTCTCACCCCTG ......x......:.x....:::x::.x....:.x.x.xx..:..x.:::.:..:...:::..:....:.:.x.:----..::::..x:.x.::...:...x...:..:..:x.x..:.:x..xxx.:....:.:.. 75M4I58M 78/133 58.6% 137/94230402 0.0% 4/133 3.0% -21544082 -72686320 +3035 chr4 + 190214555 61432564 61432563 61432647 84 CTTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:....:::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 4060538 NA +3978 chr4 + 190214555 61432566 61432565 61432686 121 TTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC--------TTTCTTTCTTTCTTTCTTTCTTTCTT---TCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGAATTTCACT chr4 + 94230402 90152551 90152550 90152682 90152551 90152550 90152682 132 TTCATTTCCCTTTTTACTTTCCCTGATTCCTTTTGCCCCCCAAGTAGGTTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ...x:....:..:..x.....::.xx...:..:.x:.:::.--------....::xx::...x.::::::.....---:.x.....:....::.:.....:.x.............x...x::......... 41M8I26M3I54M 80/121 66.1% 132/94230402 0.0% 11/121 9.1% -28719985 -65510417 +3035 chr4 + 190214555 61432568 61432567 61432651 84 CTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:..:....::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 4060542 NA +3061 chr4 + 190214555 61432575 61432574 61432664 90 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTT chr4 + 94230402 57372029 57372028 57372118 57372029 57372028 57372118 90 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTT .......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x.x..x.. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 4060546 NA +7232 chr4 + 190214555 61443694 61443693 61444048 355 CTCATTTTATTCCTCACTGAAAAATCACTCA-----TCAATTGTTCAAGGAAAAA---AAGCAGGATGGAGATAAGCCATAACTAATCTCAAATATCAAAATCGTT----TCATTGTTAGATGAGAGCAA-----TGGTGGGTAATAGACAAATTCCAATACAAATTATGTGAAATTTATATCAAAAATTTACTAATTCAGTAACACTGGATTTAGGTGGTTTCATTTTCAGTCGGTGTGATTTTAAATACATTGCAAATATATTTGATTTTGATGCCTGAATCAGTGTGTAGTATCAGTGTGTGCCTGAATCAGCGTGAGTGTCATTGAGAAACAATGACAGGAATGTATTTATATTTTGTAATACAGACA chr4 + 94230402 49483272 49483271 49483613 49483272 49483271 49483613 342 CTCGTATTATTGCTCTTTGAAAGGGTTCACAGTGTTTTGGTTACTCAGGGAAAAGCAGAGGCAAGGCACAAGTGGGCTGTGGGTAGCTCCATGTCTCCAAAGCCCTGCCTTCATTACTATGC-AGTGCAAGTGGCTGCTGGCACAAGGACAAATTCCACTGTAAGTTATGCGTGATTTACATGAGAAGCTCATTAATTCTCCAACACCGGATTTAGATGGTTTCATTTGTAAAGGGTGTCATTTTAAACACTGCTTAAACATATTTCCCTCTATCTGCTGACTCAG-----------AGTGTGTGCTGAAA--------------GATGATAAACAGTAA----AGTGTGTATGTGTTTATAAATACATGCA ...:.x.....x...x:.....::x:x.x..-----.:::..::...:......:---.:...:.:::x.::.::..::.::x..::::..x:.x..x...x.x:.----.....::..x::-..x....-----..x...xxx.x:...........x.::..:.....:.x:.....:..x.:..::.:.:......xx:.....:........:...........x:.:xx.....x........:..xx:x:...:......xx:.:.:x:xx....x....-----------.........:x:..--------------:x...x.....:.:.----.:...:.x.:.:...xxx......x:.. 31M5I19M3I48M4I12M1D7M5I151M11D14M14D15M4D28M 209/325 64.3% 342/94230402 0.0% 47/325 14.5% 11960422 NA +11037 chr4 + 190214555 61475060 61475059 61475507 448 AACGGGGAGGAAAAATGTGAAATATATGTTTTCCG----TACTCTAATTCAACATTCTGAACGGA----GTTATCCCAAGC-TAGGAAATTTTCTAATGCTTCCTTGCTTATCATTGACTTGCTCTGTAGTAGCCTTTATTGCATATCACATGCCGTAAGAT------GTCTTACTTATTTGTAAAAAATAAA-AGTATTTGTTTAAATCATGACATTTTAAGCATATTTTGTTGGAACTGGAAGGGGATAGTATTAGCTGGGATA-CAATTAACAA-AACCACTA-------------------------TGTTAGCTCAGCC-------AAGGAAAATAGTTCATTTTGGTTGAATTCAGAGCTCATTTCTGAAAGTCTGACAAAGATTTATGGGGTTTTTTTCCTGTCATTCCCACTTAGTCCCCGTGGTCCTATATCTTTC-TTGAAGTACATAAGAAACAGTTAGTGCTAATGGCAAGATATCTTCTATGAAGG chr4 + 94230402 49514517 49514516 49514992 49514517 49514516 49514992 476 AACAGGGGGGAGAAAGTGGAAATGAATGGCTTCTGGCTGTGTTGTAACTATACTTTATGACCAAACTTTGTGTTCCCAAATGTTGGAAGTCCTTTCATA----------TGTCAGTGAATAGGTCAGCA-------TTATTACAGTTCAAAATCCGAAAGATTGCTTTATCCTACTTACGTGTGGGGAGGGAATAGTATTTG----AATCATGAGACTTCAAGTACAGCTCATTAGTGCAGAGAGGGGATAAAATAAATTGGGGGAGCCATTAACAACAATGATTAAAATTTATCATAGTGGTACTATAATTGGTACCTCGGCCGAAGGAGAAGTGAAGTACTCCAAGCTAGTTGTATTAAGTGTTCATTTCTGAGAGGCTGACAAAGATTTAT--GGCTTCTTTTCTATAAGTCTCATTTAGTCTTTGTAGCACTACGTCTTTTACTGATGCACATAAGAAACAGTTACTGTTAATGGCCAGACCATTTCTATAAAGG ...:...:...:...xxx.....:x...x:...:.----.::.x...:.xx..x..x...x.::.----..xx......::-.x....:.::.:.x..:----------.:...x...x.x.x..x.:.-------.....:..xx...x.xx...x.....------:..:......:x...::::.:x:..-........----........x.:..:...:.:.x:.::..:.x:.x.::........:x..x.::....:x.-.x........-..:x.:..-------------------------..x..x...:...-------...x:..:..x.:..xx:.:....x...x..x.:..........:..x...............--..:..:...:..:.x.x..:..:......:::..:.:x...::.....:-:...x.:................x..:.......x...:xx:......:.... 35M4I26M4I12M1I17M10D20M7D26M6I25M1I8M4D60M1I10M1I8M25I13M7I63M2D49M1I53M 295/425 69.4% 476/94230402 0.0% 74/425 17.4% 11960543 NA +11538 chr4 + 190214555 61482314 61482313 61482586 273 TAAGTAAAATATTAGCTTTAAAGTATTCAGATACCGTATTTTTAATAATCTGCCAGCTTGGTTATTTCTGATGGATTTTCCATCACAGTCAATCTGTGTTCC--CTTACTTTATTTCTAGCCGGAGCCAAATATTAAACAATGACACTATATATCTTTCTGTACAATTTGCCAGTTTGGGTTACTGTGGAACCTAGGTGCTCCTGAATTGTCCTTGTGAATCACCACTCTTCCGAGAAAAGACTGAACAAAGAAATGATTTATTTACTGAAACAT chr4 + 94230402 49518745 49518744 49519018 49518745 49518744 49519018 274 TAAGGTAAGCATTGGATG-AAAGGATCTTAATGTTAGATTTTTTGCCATCAGTTGGCTCTGTTACATCTGATAGATTTCTCATCACAGGCGATCTGTGTTCTTGCTTGCTCAGATCTGTGCTGGTGCCAAGTGCTAAACAATGACACTATATATCTTTCTGCACAATTTGCCAATTTTGGTTACTTTTGAAGCCTGGTGTTCCTGCTTTGCCCTTGTGAATCTCCCTTATAGGGAGAACAAAATGAACAAAGGAGTGATTGCTTTAGCAAAATGT ....xx..::...:.x.x-....x..::x:..::::x......x::x...x.:::...:x....:x......:.....::........x.:..........:--...:..:x:x.::xx..:..x.....:.::...........................:...........:...x.......x.x...x.:x....:.....xx...:...........x..x:.x.xxx.....x.:.x.........:.:.....xx....x::...::. 18M1D83M2I171M 192/272 70.6% 274/94230402 0.0% 3/272 1.1% 11963569 NA +4317 chr4 + 190214555 61484387 61484386 61484593 207 CTTTCCTT--AGTTAGGTCATCACTGCTTTATTGGTCATCACTGTG-AAGTCAATTTTGCGAGGATTTAAATAAAATGTTAGCTTAAGACTATTAGATATCATATTTTTAATAATCTGCCAGCTTGGTTGTTTCTGATGGATTTTCCATCACAGTCAACTTGTGTTCC--CTTACTTTATTTCCAGCTGGAGCCAAATATTAAACATTATCA chr4 + 94230402 49518678 49518677 49518889 49518678 49518677 49518889 212 CTTTTCTTTCAGTTTAGACATAGCATCTTTAGGGTCTTTTTCTTTGGAAGTTAAGCTTATGTAAAAATAAGGTAAGCATTGGATGAAAGGATCTTAATGTTAGATTTTTTGCCATCAGTTGGCTCTGTTACATCTGATAGATTTCTCATCACAGGCGATCTGTGTTCTTGCTTGCTCAGATCTGTGCTGGTGCCAAGTGCTAAACAATGACA ....:...--....x:.x...x:.xx.....xx.x::x.:x..x..-....:..x:..::.x::.xx...:xx..:::..:.x.x..::xxx:.x:..:.:.x......x::x...x.:::...:x...::x......:.....::........x.:.::.......:--...:..:x:x.::xx.....x.....:.::......x.:x.. 8M2I36M1I121M2I42M 123/207 59.4% 212/94230402 0.0% 5/207 2.4% 11965709 NA +6029 chr4 + 190214555 61485091 61485090 61485264 174 CCTTTGGGTATTTTGGGCACTGATATTCTATAATGGGCCATTAAGAAAGGTGCTTAATTTGAGACCCACCTAGGTGCACCG-TACTGAGATGAGATAATTTCAAAACATGTGTATTTTCTC-TCTTGCCCGGTTGCTACTGATACACTAACTACTGAGAATGAAATATGGGAAAAT chr4 + 94230402 49520465 49520464 49520639 49520465 49520464 49520639 175 CCCTTGAATCTCTTAGAGGCTGATACTCTGTAATAGGCCATTAAGAAATATGTTTCATTTGAGGTTTATTGAGGCAGGCAGATTTTCAGATCAACCAATTTCCCAACAGGTGTATTTTCTCTTTTTGGTCAGTTGCTACTGATCCTC-AGCTATGAGGCATGACAGTAGGGCAAAT ..:...::.x.:..:.:x:......:...:....:.............x:..:..x.......::::.::x...::x:.x.-.x:.x....x.:x:......xx....x............-.:...x:.:............x.x.-.:...:x::.x....x.xxx...x.... 81M1I39M1I25M1D28M 118/173 68.2% 175/94230402 0.0% 3/173 1.7% 11964626 NA +3054 chr4 + 190214555 61485915 61485914 61485968 54 TTTTTTTTTTTTGTTTTGTTTGTTTGTTTGTTTGTTTTTTGTTTCCTTTGATGG chr4 + 94230402 77862389 77862388 77862442 77862389 77862388 77862442 54 TTTTTGTGTTTTGTTTTGTTTGTTTGTTGTTAGGTTTTTTTCTTCCTTTAACAG .....x.x....................xx.xx.......x:.......:.::. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -16376474 -77853928 +12615 chr4 + 190214555 61487870 61487869 61488244 375 AGTGTTTTCCAAATTAATTGATTTTAACATAATTATTTATTTACACCTTTAGTTTAAAACTCACTGATTTTATTTCCAGTTGAACGTATCAATATAGACAAATATTATC----------AAAGCCTATTGGTAATGTTCTCCAATCAAATGCTTTGTGGGATCTCAGAAAAGATGTTAACTCAAGGGCACTT-CACAAGAAAGTGATCCTG-TGTCGAACATTAATCTATTTCATAGATAATAGATGTGCTGCTCTAAAGCCAAAAAATAGCAATGTTCATTAAATATAAATTTGTTTCTAAACATTAATAGACATTTATTAGATCACAACACTACCTGAGAGACAATTAAATGAAACTTTTATGCTAGAAAAGTTTCCTATTAAAA chr4 + 94230402 49522457 49522456 49522829 49522457 49522456 49522829 373 AATATTTTCCAAGCCGCTTACACTTAA-GTCATCACTTA------CCTTCAGCATAAAGCTCATTGATTTTATTTCTCATTGAAAACATCAGTAGTAGCAAATATGATCCCATTGGCTTACAGTCTATTAGAAATAAAATTATATTAAATGTCTTGTGGGGT----GTGAAGAGGTTAAGTCAAGGAGAGTCGTCCGAGAAAGTCATCCCGGTGTAAAACATAAATCTGTTTTATATTTAAACTACGTGTCACCCACCAGCCAAAAA-TAGCAATGATCATTAAAACCCAATTTGCTGCTAAACATTAATAGACATTTATTACATCATAACA-GATCTGAAAGACAATTAAACTTAACTTTT-TCCTAGATAACTTTCTCCTAAAAA .:.:........::::x..:xx:....-:.x..:.:...------....:..:x....:....:............:x:.....x::....:..xx::.......x...----------.x..:.....:.x...:xxx.:xx..:.....::.......:.----.x:....x.....x......:x.x.:-:x.:.......x....:.-...x:.....x.....:...:...xx...xxx.:...:::.:.xxx.........-........x........xx:x......:.x........................x....:....-x.:....:...........:xx.......-.x.....x..x....::x.x.... 27M1D11M6D64M10I43M4D26M1I18M1I55M1D64M1D29M1D24M 261/361 72.3% 373/94230402 0.0% 26/361 7.2% 11965413 NA +3007 chr4 + 190214555 61494255 61494254 61494317 63 ACATTTACTTTCTATTTTTGTGTATGCACGTGTATGTGTATCTGTATGTGTGTGTATACATAC chr4 + 94230402 65759976 65759975 65760038 65759976 65759975 65760038 63 ATATCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTAC .:..:......xx....x..x.....:.:....:..::..:x...x.....:.::...::... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -4265721 -89964681 +8526 chr4 + 190214555 61502779 61502778 61502968 190 ATGGCATTTTATCATATAATTCTTTCTAT-------------------GAAGATGTGTTTTATTAGTGGTGAAAGAGTCAGGTTGACTTCTAAGCT-CTGCTTAACTTGGTTATTTTTAGAAATTAATCATCCTTGAAATGTTTATAACGCTTGCCAACCTAGGTAATTTGTAATATCTGCAGTAATATAACTATGTTTATAGTCAAATA chr4 + 94230402 49535562 49535561 49535769 49535562 49535561 49535769 208 ATTGCCTTTTAC--TACAATACTCTCTATTTAGTCAAAATGAAATACAAGAGACATGTTTTATTAGTTGTGAAATAGCCAAGCTGACTTCCAAGCTTCTGCCTAACTTCATTGTTTTAAAAGATTAATCATCCTTGAAATATTTATAATATTTGCTATTCCTGGCAATTTGTATTACCTGCAGTAGTGCCACCCTTTTCTTAGTGGAACA ..x..x.....:--..:...x..:.....-------------------::...::............x......x..:..:.:.......:.....-....:......x:..:....x.:.:..................:.......:::....:.x:.:x..:........x..:........:.::x..:x.x..:x....x:..:. 12M2D15M19I48M1I113M 141/188 75.0% 208/94230402 0.0% 22/188 11.7% 11967217 NA +3280 chr4 + 190214555 61512044 61512043 61512139 96 GAAAATGTGCCTTTAT-TTACAGAAAAGGAAATGAAAATAGTGGTCTCTTCTCTGCCCCCCAACCCTTCTCTTTCTTTCCCTTTTATTATATATGTT chr4 + 94230402 55972599 55972598 55972695 55972599 55972598 55972695 97 GAAAGTGTGCGGTTGGATTAAAAAAAATAAAAAGAACACAGTAATTCTTTTTATTTCCTTCTATTATATTCCTTCTATTCCTTCTATTATATATGTT ....:.....xx..:x-...x.:....x:...x...x.:...::.:::..:.x.x:..::.x.::x.x:..:....x.:....:............. 16M1I80M 63/96 65.6% 97/94230402 0.0% 1/96 1.0% 5539445 NA +3430 chr4 + 190214555 61532319 61532318 61532393 75 AATAACTTGGGACTCAGCTTTTCAAGTTACAATTAGCTGCTCAACAGCTGTGACCTTCAAGAGCTACTCATTATT chr4 + 94230402 49553615 49553614 49553689 49553615 49553614 49553689 75 AATAACCGAGGCCACAGGTTTTCAGGTCCCAATTAGCTACTCAGCAGCTCTGTCTTCCTGGAGCTGCCTCTTGCT ......:x:..x.x...x......:..:x.........:....:.....x..x.:.:.x:.....:.::x..::. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 11978704 NA +3189 chr4 + 190214555 61538415 61538414 61538454 40 AGCAGGAGTTTTTTATTGTTGTTGTTTGTTTGTTTTTTTG chr4 + 94230402 14587472 14587471 14587511 14587472 14587471 14587511 40 AGCAGGGTTTTTTTTTTGTTGTTGTTTGTTTGTTTTTTTG ......:x......x......................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 46950943 NA +3229 chr4 + 190214555 61541823 61541822 61541873 51 ATATATATGTGTGTGTGTATACACACACACACACACACACACACACACACA chr4 + 94230402 68837093 68837092 68837143 68837093 68837092 68837143 51 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .::.:.::..........:........x.:...:...:.....::...... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -7295270 -86935132 +3194 chr4 + 190214555 61571385 61571384 61571455 71 CACCTTTAGTCCCAGCTACTCAGGAGGCTGAGACGAGAGGATCGCTTAGGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x....:.........::::........x.xx.x.:.x.:...:::.....:..:.:x:.....:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -14461822 -79768580 +3098 chr4 + 190214555 61587047 61587046 61587121 75 AAGAAAAATATTTATAAAGTTACTGAAGAGAAAAATATTCTAGTTTAATTAAAATTATGAATCTTAACTGCTTTA chr4 + 94230402 23923856 23923855 23923930 23923856 23923855 23923930 75 AATAAACATATTTTTAAAGTTACTCCAGTTAAAAATATTTTACAAAGATGGAAATTAAGAATCTTATGTACCTTA ..x...x......x..........xx..xx.........:..xxxx:..x:......x........xx.:.:... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 37663191 NA +18515 chr4 + 190214555 61587218 61587217 61587467 250 TTTTGGCAGCTTTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGCAGAGAGCTATCCTGTGAGAGCTATCCTATAGAGCTTCGCTGTCCAGGAACAGACGTCATCATGATAGAAAGTGCCAACTATGGCAGGACTGATGACAAAATTTGTGACTCTGACCCTGCTCAGATGGAGAATATCCGATGTTATCTGCCAGATGCCTATAAGATTATGTCTCAAAGGTATGATACTTCTAATATTCTTTTCTT chr4 + 94230402 49579460 49579459 49579707 49579460 49579459 49579707 248 TCCTTGCAGCTTTCAGCCGTGCCCCGGTCCCCATGGCTGTGGTCCGAAGGGAACTGTCCTGTGAGAGTTACCCCATAGAGCTTCGCTGCCCGGGAACAGATGTTATCATGATTGAAAGTGCCAACTACGGGAGGACTGATGATAAAATCTGTGACTCTGATCCTGCTCAGATGGAGAATATCCGCTGTTATCTGCCAGATGCCTATAAGATTATGACTCAAAGGTATAGTA--TTTAATATTCTTTGTTT .::.x....................::.:..x..............x..:..:..:...........:..:..:..............:..:........:..:........x..............:..x...........:.....:...........:.......................x..............................x...........::..--.:...........x:.. 231M2D17M 217/248 87.5% 248/94230402 0.0% 2/248 0.8% 12007758 NA +7239 chr4 + 190214555 61609549 61609548 61609831 283 AAGTATTTCATGTCTTA-AATCACATTATTAATATTGAGTTCAGTTTGTCTGTGTATGTTTTGAGTATCTTAGAGTTCTTCCTCCTGAATTTTCTTTCCT--------GTATGTACAATCCTGATTATGCAGCCCAGCTTCACCTAATATTGTTATGTCTTAATCCCTCCTTCCCTCGGGCACGCCCT-----------------GTGTTATTTTCAAATGTGTAGCATTGTGATAACAAATATATTAAATTAGGACCCTCCAGCTTCTGATCTGAATTTTAAAATGGCCTGTGAGCAGTCATTTTTTA chr4 + 94230402 49591313 49591312 49591602 49591313 49591312 49591602 290 AATTAATTCATGTTTTTTAATCACGTTA-----GTTTCTTCCAGTGTTTCCTTGC--GTTTTAGGAAC--TGAAACTCTCCACCATGAATTTCATTTCCTCAGTGTTGGTGTGGGAAGTCCTGATTGCGTAGCCCATTTTGATCCAAGGTTGC---ATCTTAATCCCCTCCTCCCAGGGGTATACCCTCAAGTTTGGCAAGTACTGCATGTCTGTCAAATGTGTACCATATTGATAACACGTACGTGGAATTAGGGCCCTTCTGCTCCTGATTTGAATTCTGA----GCATGT---CGGGCATTTCTTA ..x..x.......:..x-......:...-----:..xxx.:....x.x..:x..:--.....::.x.:--.::.::...:.x:.x.......:x......--------..:..x:x.:........::.:......x:..x.:.:..x:...:---:..........::.:....xx...:.::....-----------------.::.xx:.x...........x...xx........x:..::.x:.......:....:.x...:.....:......:.:.----..x...---.:.x.....:... 17M1I10M5D22M2D11M2D30M8I45M3D32M17I78M4D6M3D13M 184/264 69.7% 290/94230402 0.0% 45/264 17.0% 12018236 NA +9071 chr4 + 190214555 61629777 61629776 61630003 227 TTTGGATTCATCCAAAAA---TTATAATGCAGACTGCCAGAATCACAGTCATTTGCATTGAACATGTGTCCTAATTGTATCCATGTGTTGGCATGATATTCTGTAGAGACTAATTCTAATCAATTCTGTCTAAACATTCTGGATTTCCCATCAATTACTATGCTAAGTCCTTGACACAATTCCTGCCAATCTTTGGGCAAATGCCTCCCAGTACTTCTATTTTAACACCC chr4 + 94230402 49606658 49606657 49606884 49606658 49606657 49606884 227 TTTGGTCATATCCAAACAAGCTGCCATCGCAAGCTGCCAGAACTTGGACCGCTTTCCTTGGACATGTTTTGTAATGGCATAAGAATTTTGGCATGCTGTGGTGTAGAGGCTAATTTCAGGCAGTGCTGTCTAAACACACTAGATTTCCCATCAATTATACTGCTAAATCTTTGACAGACT--CTGCCAGTCTTTGGGTAAACGCTTCCCAGTTTTTC-ATTCTGACAGCC .....x:x:.......x.---.xx:.x:...::.........::xx:::.::..x.x...:......x.:x....x.:..xx:x:.x........x.:.xx.......:......::.:x..:.x...........:x..:................:xx......:..:......x.x.--......:........:...:..:.......x:...-...:.:...x.. 18M3I159M2D35M1D12M 159/224 71.0% 227/94230402 0.0% 6/224 2.7% 12023119 NA +3061 chr4 + 190214555 61631746 61631745 61631809 64 AAAATAAGCTAAATTTAATTTTTTTTTTCTTTTCTTTTTTTTCTTTTCTTTTTTTGTATTTTTA chr4 + 94230402 72581770 72581769 72581833 72581770 72581769 72581833 64 AAAATCAGTTAAGTTTCATTTTCTTTCACCTCTCCTTTTTTCTTCTTTTTTACTTATGCCTTTA .....x..:...:...x.....:...:x.:.:..:......::.:..:...x:..:.:::.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -10950024 -83280378 +10196 chr4 + 190214555 61648280 61648279 61648673 394 AGAAGAAATCTTTTATACTTAATCCAGGATTCTAGTGAGTAGCTTTTAAGAGTTAGGAAATGAAATCGGCTTTTTTTTTTTTTTTTTTTTTAATTTGAAGACAACCCTCAATGAGTGATTTTTCTGCTAGGCTGTGTTGAAATGAGAAACATTCCT--TTCCAGGTCAGTAAGTTAATCAAGTCCAGGATTTATCTCTTTTGTCATTCATATCAGTCACAGATTAATTTGCATTAGGAATTTTTTTGTTTTTTTTTCTGTTTCTTTTGGGGTTTTTTTTAGATTTTAATAGTCTTTTTC-TGTGCTGAGTAATCCTCTTTTTAAGTTTGTGAAACTAAATTTTTAATAAGCTATGCTTCTATTCTCTAACTAGAGGAGAAAGAACAGTC--TAGAATAT chr4 + 94230402 49612625 49612624 49612975 49612625 49612624 49612975 351 AAAGAAAGGCTTCCCTAGTGTGTCCAAGTTTCTGGTGAATGGCTCCTTTGGGTGCGGAAGTGAGCGCGGGGCTCCTTTC-------------AGCTGAATGGAACAGTTAATGAGTG-TTTCTCTGTTCTGCGCTGCTGGAATGAGACACATCCCTCTTTCTAGGTCAATAAGTTAATCAAGTCAAGGATTTCTGTCCATTGTCCTTCTTATCAGTCACAGCTGCATTTGCATTAGGAAGCTTTCTGTTTCTTT----------------------------------AAGCCTCATTCATGTACTGATTAAATCCCTTTCCAAGTCTGCAAAAGCGAATGCCTAATGTATTTTATGGCCATCTCCCGACCTAAGTGAAAACAACATTCAGTAGGATGT .:.::..:x...::x..x.xx:....:.x....:....:.:...::.xx.:..xx....:...:xx...xx:.::...:-------------.x:....x:x...xx.:........-...:....:.xx..xx..:..:.......x....:...--...:......:...............x.......x.x..:x.....x...x............x.xx..............x:...:.....:...----------------------------------x..:..:x...-...:....x...x:.:....::....:..::...x::...x::....:x::.x.::xx.:..:::.::..:x:..x::...x....x..--...:..:. 79M13D25M1D38M2I96M34D11M1I89M2I8M 233/346 67.3% 351/94230402 0.0% 53/346 15.3% 12035655 NA +3128 chr4 + 190214555 61653147 61653146 61653186 40 CTCTGTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::x..................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -13594902 -80635500 +3499 chr4 + 190214555 61653149 61653148 61653238 90 CTGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAGAGCCATATGAGAACATAGAAAGAATGCAA chr4 + 94230402 75248049 75248048 75248132 75248049 75248048 75248132 84 CTTCCTCTCTCTCTCTCTCTCT------CACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaa ..x:..................------..................x.x.x.x.x.x.x....xx.x.x:.:..x.x........x.x.. 22M6D62M 65/84 77.4% 84/94230402 0.0% 6/84 7.1% -13594900 -80635502 +3002 chr4 + 190214555 61653152 61653151 61653186 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 49051847 NA +3305 chr4 + 190214555 61653152 61653151 61653238 87 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAGAGCCATATGAGAACATAGAAAGAATGCAA chr4 + 94230402 75248050 75248049 75248128 75248050 75248049 75248128 79 TTCCTCTCTCTCTCTCTCT--------CTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaa .::................--------.x..................x.x.x.x.x....xx.x.x:.:..x.x........x.x.. 19M8D60M 61/79 77.2% 79/94230402 0.0% 8/79 10.1% -13594898 -80635504 +3316 chr4 + 190214555 61653153 61653152 61653188 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 49051849 NA +3102 chr4 + 190214555 61653155 61653154 61653190 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 49051851 NA +9088 chr4 + 190214555 61666220 61666219 61666751 532 CCATTTTTCCTAGCTCATCTTAT----GTTTTTCTTT--TTAAAGGCTTTCATGTTACTTGACTTCAATATCTAGTATTAGTAAAAGTTCCTTTTCTTTCCATTTCTCTTTCTAAAGGTTTGATTCTGTTTCTCCTTTTTTCAAACATACATAAGTCATTTGACTTGGAAATATCACATATTGA-----AAGAAAAATGTCTTAACTAAGTGATTCAGTATGACATTCCTTGTCTCAGCCCAGTCATGCGGAGAGGACATTTTTGTTGCTCAGAAAAGAAAA-GAATGCCTTACAGCACTCCATTGAAGTATAATGAATTAAATCTGTCCCAGATGAAAAAAAAAAAAGGAAAAAAGAGTAGAATAGTAAGTGGTCTGGTAAAATGGATTCAGATAGTAATATCCTAACTAACTCACAGTGA-AATGCACAT------TGTTTTAACTTAAGAGAAATAAAGTAGTATATTATATAACATATGCAATATATAAGGTGCGTATAACATATTGCTCCCTTATATTAGGTGAAAATAAGCAATATCTTTATTTG chr4 + 94230402 49626106 49626105 49626615 49626106 49626105 49626615 510 cccttccttctctcccttcttATTACTGTTTCCCCTTATTTGCAATCTATCATAAGGCTCCTCTTAAA-----------AGTAAAATTTTGCTTTACTTCCTGTCTGTTTTCTCCAG-TGTGTTATTATTTTTTTTCCTCTTGGCCCTTCCTAAAG-AGTTGACTTGGAAATACCACATATTGACAGGAAAGAAGACACTTCTGGCTGACTTATTCACCACGACAAGCTTTTTCTTAAAGCAATCATCCAGAGAGGGGATTTCTGTGTTTCAGAAAAGAAAAAGAATGTCTTGCAGCATTGCCATGAAGGATAATGAATTAAGTCTGTCTCTTACTGTAAAACCATGAGAAAGGTATAATAGA-----------CCTTGAGAAACAGTCTTGGATATTGATGTCTTGGCTATATTAGCGTGGCCATTCATGTGATGGCTGCCTTGCCTTTGCAAAAATAATACAGC---CCATGTAAAATA---GATGTCTCAGTTGAGCA-----------TCTCTTTTATCTGGTGGGCACGAAGAACCCCCTTGTGTG ..x..::.:..xx.:.x......----....::.:..--..:x.:x..x....:xx:..:xx...x..-----------.......x..:x:...x:....xx.::x:.....xx..-.x..x.x:.:...:.::.::.:.:::x.x.x.x...:x-.x..............:..........-----.....:.xxx.::.::..:.x.x.....x:.:....xx.:..x...:.:xx..:....x.:......:x....:...xx:.............-.....:...:.....:.x.xx.....x............:......:.xx.:x:x....xx.x:..:..::x.x.:....-----------:..x.x:...::.x:.::....x.:..:..:.::...xx.:.xx...:-x..x..::.------..::..:x...x:x.:......x::..:---::..:...x...---:..:.x.x..x..x.:.-----------..:...x...:x....::x.::.:x..:x:.:..:.x.. 23M4I10M2I29M11D38M1D38M1D27M5I93M1I80M11D48M1I9M6I28M3D12M3D17M11D39M 309/491 62.9% 510/94230402 0.0% 60/491 12.2% 12040114 NA +9759 chr4 + 190214555 61674947 61674946 61675358 412 TGATCATCAGCCTCTAACATAGAAAATCCTTACAACTTGTTAACCTTCAGGATTAGCTGTTAT---GCTAAATTGCCTGATGAGTATGGAGTATTAGCTTTTATTCACCTTTCACTGATAACACAGAATATATTTTTCAGCTTCAGACATTCATTAATGAATCAAATTTA------GGGACTAAATAAAATCCTTATTAAGCCTGACAAATGGTAGCCTCAGGTAAACCCAACGTATTTTTACACTAAATCAAAGTGAGTTCTGCTCTAGATGCTCTTTATGTTGCCACTATCCTTGCAAGTATTCTGAGGTCAC-------ATCAGAGAACAGAACATCTCCTTAAGGAATTAACAGAAG-AATCTAGCCCTGAGGTATTATATTTCTGAAATGAATAAACAAGAACATAAAACACAGGGGATAATTA chr4 + 94230402 49629403 49629402 49629815 49629403 49629402 49629815 413 TAACTGTCGTCTTTCAACA-AGAAAA-CATGAAAATGTCCCAGCCCTCTGGATTATCTGTTATCCGGCAAACGAGTCTGATGAGCA-AGCGTATCAGCTCTTATTAATCTTTCCATGAAATTAAAGAA---ATTATGGAGCTTAAGGCAGTGACTAATGAATCAATTTTAATTTATGGGCTCAAATAAAATCCTCATTAAGCCTGACAAACTATAGCCTCAGGTAAACATGAAGCATTTCCACTGCAGAGCTAAATGAGCTCTGCACTGGATGTTGTGGCTTCTGCCAGCAGAGCAGTGGG--GTCAGAGGTCCCTTGTCTTGTCGCAGGAGGCAGCAGCT--TGGAGAAAGTAAATGCAGTGGTCCAGCCCCCGGGAGATCTGTTTCTGGCATGAGAAAGGATAAATATCAAA------GGCTAATTA .:.:::..:x.:.::....-......-.x.x.x..:x.x::.:..:..x......x.......---..x..xxx.:........:.-:.x....:....:.....x.:.....xx...x.x:.x....---...x.xx.....x..:..x.x.:...........x....------...x::............:...............:x:...............x::.x.:....::..xx:.:.x.x..:....:.....x..:....:.x.xxx.x:.....x:.xxx:x.:::.--x..x......x.-------:..:x..:.x:x.:..x..--.x:..:..x...xx.x..-::..:.....:x:..x:x.x.:......:x....:x..:x.x:..:..x...------..x...... 19M1D6M1D36M3I20M1D41M3D39M6I125M2D12M7I19M2D18M1I52M6D9M 266/396 67.2% 413/94230402 0.0% 33/396 8.3% 12045544 NA +9571 chr4 + 190214555 61676800 61676799 61676975 176 CTTCTTTTCCTTTCTTTTGACTTCAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGAACCTATAAATACCTTGAAGTGCAGTATGAATGTGTCCCTTACAGTATGTATATTCCTATACT--------TTTCTTGGCAAGAGAAAAGAT chr4 + 94230402 49630658 49630657 49630841 49630658 49630657 49630841 184 CCCTTTTTTTTTTTTTTTCATTCCAGATGCAGTAATCGGACCCAATGTGCTGTTGTGGCTGGCCCTGATGTGTTTCCAGACCCTTGCCCTGGGACGTACAAATACCTGGAGGTTCAGTATGAATGTGTCCCTTACAGTATGTATCTTGATATATTTGCATTTGTTTCTTTAACAGAGAATTGAT .:::....::...:....x.:.:........:...:x.:.....:.....x..x.....x..:........x...........x..:..x..:..x..:........x..:..x..............................x..xx....:.--------......x:xx......xx... 155M8I21M 138/176 78.4% 184/94230402 0.0% 8/176 4.5% 12046142 NA +9228 chr4 + 190214555 61681223 61681222 61681593 371 AATAAAACAACTAACCACCTACTCAGAGTATTTCTGAGCAAAGAATCTTTACTTTGTATCCTGCTGACAAATTGTCTTTCTTCCGAGGCATACAATTTCACGCACATTACACTCAAAA---GGTGTTTGTCTTCTCTCACAGTC-CAGCTTTTCTCTTCAATTCTTTGTTTCTTTTTTTTCAG-------AACAATAAAGCATATATTACTTATTCTAGCAATCTTCTCTCATGGTGAATTTTCTAAGAAAATTGCGGGGGGAAGTACACAATTTGGAAAGTGACTAGAAATGAATGTTTGATTAAAACAACCT--TGTTATAGCACTT----------AAGACTTTCTCACTAGTCACATTAGCCATTTGAATAGTTGTGTGCATGATTGTCC chr4 + 94230402 49636089 49636088 49636457 49636089 49636088 49636457 369 AAAAAAATAACTAAGCACCCATTATGAATATTTCAGGACAAAGAATCTTTACTTTGTATCCTGCAGACAAATTGCCTTTCTTCAGAGGCATACAATTTCACAGGCAATGCAGCCAAAACTCCTTTTTTGTATTTGCTGAAATTCTCAGCTCTGC-----------TTGTCTCTTCTTTGTCAGAGGAAGCAGAAACAAAGGACCTGCTGCTTCCCCTATCAGCCTCTTGTCACTGCTTGCTTAT-------------GGGGAGACTGCACACATACAATGGCAGCTTGGAAAGCACCCTTAATTAAAATAACCTGATATTATGGGGCTTTGGAAACCTGGAGTCTGTTAGCCTGGAGGC-TGAGCTATCTGCATAGGTGAATgcaaagttttcc ..x....:......x....:.:.xx..:......x.::..........................x.........:........x.................:x:..x.:..x:.....---xx.x.....x..:x..x.x.x..-.....:.x.-----------....:....:...x....-------.:x..:....x.:x.::.:...x::...x..::..::.x...:x.:xx::..x:-------------....::.x.:....xx.xx:.x:.:::..x.:..x.x.:x:..:.......:.....--.:....:.x:...----------:..x..x.:xxx..:.xx:.-.x...:..:..x....x..x:....x::..x... 118M3I23M1I9M11D18M7I54M13D57M2I13M10I20M1D34M 235/346 67.9% 369/94230402 0.0% 48/346 13.9% 12045134 NA +9489 chr4 + 190214555 61693627 61693626 61693909 283 TGAGGTATTGATGTTTTGTGATACTTTGGTCAGTCAATAAGGTTAAAAAGATAAAGTTTATTTAGTTTTCAACATTGCCTTCTTGCAGTCAAATGTCTATTTAATTAAATTTTCCAATATTTGGCAAGAAAGGACTGGCAGTGTCAGCT-TTCTTCAGCTTGATATTAAATAGCATCTTGTGAAATTTGGTAAAGACTATCTA---CAGTGATATGAAACAGATATACTTTGATTCCACTTAGGAGAGGAGTGAGAAGTCCAAATTCTTTGTCAA-------GGCAGTTAATAA chr4 + 94230402 49645198 49645197 49645490 49645198 49645197 49645490 293 TGTGGTATCGGTAGAGTGTTTTACTTTGGTCAATCAATAGGGTCGAGAGGTGAGAGTTTGTCTGGTTTATATCACTGTTTGCTTGAAGTTGAATAGGTAGCCAATTAAATTTTCCAATATTGAGCAAGAATAGAGTGATAGTGTCAGCTCTTCTGCAAATGGATATTAAATTACACGATGTAGAAGTGGCTACAGATGATTCATGGCAATAATATGTCCCAGTTACACGTTCATCGCGTTCAAAAGACAATTGTGAGGT-TGATTTCATTGCCAAGCTGCATGGTAGTTAATGA ..x.....:.:.:xxx...xx...........:......:...::.:.:.xx.:.....:.:.:....x:.x..:..::.x....x...::...:xx..x::...................x:.......x:..x..::..........-....x..:x.x..........x:..:xx...::..x.x.x..x...:x..::.---..:.:.....xxx...x..:..x..x..:x.::.:.::...x:.x..x..:..-::.x...x...:...-------..:.......:. 149M1I53M3I53M1D15M7I12M 191/282 67.7% 293/94230402 0.0% 12/282 4.3% 12048429 NA +3055 chr4 + 190214555 61694165 61694164 61694235 71 AAAATTTTGTCATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGGCAGGATCTTGC chr4 + 94230402 34187268 34187267 34187338 34187268 34187267 34187338 71 AACATTTTTTTTTTAATACTTTAGGTTTTTTTTATTTTTTTCTTTTACTTTTGTTAGAAGCAGGAAATTAC ..x.....x.:x...x.x:...xxx........x.......:....x:....x.....:......xx..:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 27506897 NA +3189 chr4 + 190214555 61698323 61698322 61698381 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -14334883 -79895519 +3066 chr4 + 190214555 61711469 61711468 61711524 56 TATATATATATATATATATATATACACACACACACACACACACACAATAGCATGAT chr4 + 94230402 53944239 53944238 53944294 53944239 53944238 53944294 56 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACAAT ......:x...:.x.x..x..x..:.::..................x.....::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 7767230 NA +3036 chr4 + 190214555 61711473 61711472 61711512 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 57302391 NA +3063 chr4 + 190214555 61711474 61711473 61711527 54 ATATATATATATATATATACACACACACACACACACACACAATAGCAT-----GATTGT chr4 + 94230402 85078510 85078509 85078568 85078510 85078509 85078568 59 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTGAAAGATTGT .......:.x....x....:.:................xx..x.....-----...... 48M5I6M 46/54 85.2% 59/94230402 0.0% 5/54 9.3% -23367036 -70863366 +4159 chr4 + 190214555 61712253 61712252 61712346 94 CACAGTAGTGTATGCCTGTAGTTCCAGCTACTTGAGAGGCTGAGGCAGGAGGGTCACTTAAGCCTGGAAGGTTGAGGCTACTGTGAGGCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG---CTGTAGAACATGAT ......:...:.:.--...................:........x.xx.x.::x.....:.:..::....x..x:..---....::::...... 14M2D61M3D14M 67/89 75.3% 89/94230402 0.0% 5/89 5.6% -14320944 -79909458 +15938 chr4 + 190214555 61724225 61724224 61724741 517 TGTATCAACTTTAAGTATTACCAATAATAACTT--CGAAAAATTATTATTTTTACTAAAGCTATTATAAATAGATTCTCAAAAGAGTCTACTAAGAGAGCTG-CATTTTCTTCTAAAAGGCTGAATTAATAGTTTGAAAGGTTTTGCAGATCCATCAATGGCATGGAATGTTAATACAAAATA-------------------AAAGGCCATCCCAGTTTCTGTAGCATCTATAGATATTGCATTTAAGTGTTTAAATTAGAATATGGCTAGCAAAAGCATTCTATGAATTATTGGCATTTTCAATCTGCACACTCCAGGATGAAATTCATTAGGAGGTGTTAATTTTGGAAACAAATTATATAAAGCCATTGTAATGCAAGGTACTTGAGCAGCACTTTTATTCAGTGATGCATGGGTA-TTATTTGAAAAACATAATTTAGAAGCTGAGCTGCAGAGATTACTCCTCTCATTAAATAAAGGATTAGTACTTTATTTACTGAAAGTGACAGATGTCTGTCAGAATTTTTGATATGCAATA chr4 + 94230402 49659465 49659464 49659970 49659465 49659464 49659970 506 TGTTTTAACATGAATAATCCTCAGTATTATTTCAGTGAAAATTCATTA-----AATGTAGTTATTACGTATT--------AAGAAGCAGACTGAAAGCACTGACATTTTAA---GGAAGCCCAAATTAATGGTTTGAAAGGTTTCACAAATTTATCAG----ATGAAAATCTAAGAAAAAATACATATATCCATTTATGAAAAACGACAGCTTTGATTTCTGCAA-ATCTATAGATACCATATTTAAGGATCTAATTTAGGTTGTGGTTTGTGAAAGCGTT-TATGGATTATTGACATTTCCAATCTCTGTACTTCACAGCGAAAATAATTAGGAAGTGATATTTTGGGGAACATGTTACATGAAGCCGTTGTAACACAAGGTACCCACAGAGCACTTTAGTTCACTGTTGCCTAGGTATTTATATCAAAAACGTAATTTGGAAGTGAAGC--AAGCATTCCCTCCTTTTATTAAATAAAGGATTAGCACTTCATTTGCTGTAAA----------CTGCAAGAATTTCTGGTGTGCAATA ...x.:...x.x..xx..:x:..:..x..x:.:--:.....x.:....-----.x.:x..:.....::x..x--------..::..:xx...:.:..x:...-......xx---::...x.::.......:.............::..:..::....:----...:..xx:...x.x......-------------------..x.:.x:::::::......:.:-...........::::.......x:.:...x....:x.:...:.x.::.....:..-....:.......:.....:......x:::...:..x:::....x.x.......:...x..x...x..:....x:...:..:.....:......::........:::x:x........x:....x..x...x.:....-....x.x......:......:....:x:...--x..x:x.:x.....:.:.................:....:....:...x..:----------...:x.......:..:.:....... 33M2I13M5D19M8D22M1I8M3D44M4D21M19I23M1D55M1D137M1I31M2D52M10D25M 338/483 70.0% 506/94230402 0.0% 57/483 11.8% 12064760 NA +17330 chr4 + 190214555 61730448 61730447 61730873 426 TGTATTAGAGAG-ATGGGTTTTATTAAAACATAT-----------AATGTTCA-ATAAAGCAAGTATGAGTGAAATAAATTATTTA------CTTTCAGTTTGGAAGAGGTGAATAAAAAGTGCTTGGCCAATACCGTACCATTAATCTATTCTCTTTTCTCCTTTCTCTCTTTACTTCTCTCTCTCCAATAGAAGTGGAACAAAAAGGTAATTAAATACCTTTCATAAATTATATA--------CTATTTATAGGCTAAGTTATTTAACAGTTTAACA-TTTAGTTAAAATAATTTTGTTATTAATTCT---TATCTATTTTATGAAAATTTATTTACTACTTCTGCTGCTCAACTTCACT---TTAATCTGTATTACTGACAAGAGT---------CACTTTCTTTTATCTAAGAAGAGTTTAGTAGTATAAAATT---TTCAACAGTGTATTTTATTCCCCTTTATTTT chr4 + 94230402 49666072 49666071 49666515 49666072 49666071 49666515 444 TGTATAAGAGAGGAAAAGCTTTA----AATATATCTATATATAAAAATGTTCACATACTGTAGTAGTATCTGAAGTAAATTATTTAATCTTCCTTTTCATGTGAAAGAGGTTAA-GAAAAGTACCTGGCCAATACAGTACCATTAATCTATTCTCTTTTCTCCTTTCTCTCTTTACTTCTCTCTCTACAATAGAAGTGGAGCAAAAAGGTAATTAAATACCTTTC--AAATTATATATATATTACTTATGTGTAGGCTAAGTTATTTAACAGTTTAACGTTTTAGTTGAAAT-ACTTTGTCATTAATTCTCACTACTTTTTTTGTTAAAGTTTATTTAGTCTCTCTGCTGCTCAACTTCATGAGATAACTCATTTTTGCTGAAAAGTTTTACCGGTACCACTTTCTTTCAT--------------------TAAATTTCTATTCAACGGTTTAGATAATTCACTTTTCTCCT .....x......-.x::.:....----..:....-----------........-...xx.:.:xx:.:xx....:...........------....:x:.x..:.......x..-:......:.:..........x..................................................x.............:........................--..........--------:...x.:..........................:-.......:....-.:.....:.........---..::.x....:.x...:........x.x::.................:x---.x.x..xx.x..:....x...xx.---------..........:..--------------------....x..---......:..x..xx.x....x.:...x.::. 12M1I10M4D7M11I8M1I32M6I22M1D110M2D10M8I34M1I12M1D17M3I49M3I24M9I13M20D7M3I31M 329/398 82.7% 444/94230402 0.0% 74/398 18.6% 12064376 NA +73355 chr4 + 190214555 61731923 61731922 61733559 1637 TTCATCCTGAAGTATGAGCAGCAAAATATTATAGCAAGTAATCTTGGGTTTTAATGCTCTTCTCATGTAACAGTAAAAGGTACATGTTTTTAAGTTCCAA--TACTACTGTATTTAACAGGACATTTTT-AACTGATTAAAATCTAGATCTTGGGTTCTTTTC---TGTAACCTTTCACCTTTTCTTCTTTCCTTATTCCTTCTTTCCTTTCTTTTTCTTCCTTTCTCTTTTCCTTCCAGTATCCATCCATCACTCATTTTTAATTGTGTGGGTTGCATGCTCTGTGTGTGTTGTAGCAACGTTGAGAGCTTTTTTGCTAAAAGATTCAGTGGCCTGTATTACAGGG----CTTTTCTTTTTCCTTTA--TCAAA---------AAATTACTATGAGATATTCATCTG-TTTCTTAATGATAACTACTGAATGGTGAATTTCA---------TCAGAATGGAAAC--------AATATTTTTGTTTCAAAATATGTTCTTCAATGAACTATTAAAAGTA-TTGTGTGTAAACATT---------TGTATTTCTTATATGTCTATAGAATACATAGACAT------ATGTTACATCTGATATATGTTTCCAAAAATATTGTAG-----CATA------------TTTACAAAGGTAACAATCACAGGAATGCACAGCTACTCACAAAAAGGCTAGATATTTTTCAGTTAT------------CAAAATCAAAATGATTTTGAAATGAAGCCAAAATTAATGTGGAAGAATACTTTGTGTTCTTAAAAGAATG--CAGCAAAATAAGTGATGGTGGGTATCTCTTGTTAGAG---------------TTGCATTCCATTTGGTGAAAAAT--AAGACTATATAA--------------------CAAAATATGAAATTAATATATTTATTTATTTTAACTGTTT--CCCTTCCAACAGTTTTTCTTTGTCCTGGACTACTAAAAGGAGTATACCAGAGTGAACATTTGTTTGAGTCCGACCACCAATCTGGGGCGTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGATTTATTATATGCCCTGGACTCCCTACAGAACTGATACCCTGACTGAGTATTCATCCAAGGATGACTTCATTGCTGGAAGACCAACTACAACCTACAAGCTCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGTATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCAGGAACATAGTAAAGTTTGATTTGCGGACTAGGATAAAGAGTGGAGAGGCTATCATAGCAAATGCCAATTACCATGATACCTCCCCTTACCGATGGGGAGGCAAATCTGACATAGACCTGGCAGTAGATGAGAATGGGCTATGGGTAATCTATGCAACAGAACAAAACAATGGTAAAATTGTCATTAGTCAATTGAACCCTTACACCCTACGGATCGAAGGAACATGGGATACTGCATATGATAAAAGGTCAGCTTCCAATGCCTTTATGATTTGTGGAATTCTGTATGTGGTCAAATCTGTATATGAGGATGATGACAATGAGGCTACTGGAAATAAGATTGACTACATTTACAACACTGACCAAAGCAAGGATAGTTTGGTGGATGTACCCTTTCCTAATTCATACCAGTACATTGCAGCTGTGGATTACAACCCCAGGGACAACCTACTTTATGTATGGAATAACTATCACGTCGTGAAATATTCTTTGGATTTTGGACCTCTGGATAGTAGATCAGGTAAG chr4 + 94230402 49667119 49667118 49668845 49667119 49667118 49668845 1727 TCCCCCCAGAAGTCTGAGCAGCAAAGCACCCCAGTTAGTCAAACCGCTCCTCTGTGCTCCTCTCATGTAACAATAGAAGGTATATGTTTTTAAGTTATGAGTTACTACTATATTTAACAGGACATTTTTTAACTGATTAAAATCTAGACCTCGGGTTCCTTTGCAGTGGAACTCTCCAGTTCTTttccttccttctctcctttctttcttccttt--cttccttcct--ttTCCTTTCAGCCTTCATACATCATTCATTTTTAATTGTGTGGACTGCATGTTTCGTGTGTCCTGTAGCAGCTTCAGAAGCCTCATTTCTAGTTCCACTACTGGTCTGTA--GCTGGGTATTCCCTCCTGCTCCCTTTGCTTTAAATGCTCTTCTGAGTTGCTAAGGGATTCGCCTCTGCTTTGCTATTGGTACCCTTTAAATATTTAATATCACTTGGGCCATAAGGATGGGAATTTCTTTCTCTTATTTCCATTTCTAGGC-CACTCTGCAGTGGGCTGTTCAAAATAACTATGTGGAATAATTCCCCAGGAGTTTACCCCTT---CACCTAGTAGGTACAGATTCACTGCAGAATGTAATCT-GGAAATACAAACCCAGAAATCCTTTGGGGGCACATACTCATTTCAGAGTTTACAAAGGCGAGCGGTCCAAGTAAGTACACCTGT--AAAAATAGATTTGAAA------AGTAATAAGAAAATGAGCCAAAGTTGATAGAA----AAAACAGAACAACAATCAATTTGGTGGAGCAAGTCTTGTTCT-AGAGGCTTGGCCAGCAG-------GATGGCTGGT--CTCCAGTTACAGGGCATTGCTCTGACCTCGAGTGTCCTCTGCTGCAGAACTGCAGACTATTTAGAAGTTTGGTCCAACCACCTCCAGAGTCT--CATTAACTTTGTTTTTTGTTTTAAATTCTTTCCCCCTCCAACAGTTTTCCTTTGCCCTGGACTGCTGAAAGGAGTATACCAGAGCGAACACCTGTTTGAATCCGACCACCAGTCTGGTGCCTGGTGCAAAGACCCGCTGCAGGCATCTGACAAGATCTACTACATGCCCTGGACGCCTTATCGGACAGACACACTGACGGAGTACTCGTCCAAGGATGACTTCATCGCTGGGAGGCCGACCACGACCTACAAACTCCCTCACCGAGTGGACGGCACAGGGTTTGTGGTGTACGACGGGGCTTTGTTCTTCAACAAGGAGCGAACCCGAAATATAGTCAAGTTTGACTTGCGGACAAGGATAAAAAGTGGGGAGGCTATCATAGCTAATGCAAATTACCATGACACCTCTCCCTACCGCTGGGGAGGCAAGTCTGATATAGACCTGGCCGTGGATGAGAATGGGCTATGGGTTATCTATGCAACAGAACAAAATAATGGCAAAATAGTCATTAGCCAGTTAAACCCTTATACATTAAGGATTGAAGGGACGTGGGATACTGCCTATGACAAGAGGTCAGCTTCTAACGCTTTTATGATCTGTGGGATTTTATATGTGGTCAAGTCTGTGTATGAAGATGATGACAATGAAGCCACGGGGAATAAAATAGACTACATATATAACACTGACCAAAGCAAGGATAGCATGGTGGATGTGCCCTTTCCAAACTCCTATCAGTACATTGCTGCTGTGGATTATAATCCCCGGGACAACCTTCTTTACGTATGGAACAACTATCACGTAGTGAAGTATTCCTTGGATTTTGGCCCGCTGGACAGCAGAGCAGGTAAG .:.x:..x.....x...........::.::x:..:x...x.xx::.xx::.:x:.....:............:..:......:.............x::.--.......:...................-..................:..:......:...x---..x...::.:..x:.:..:.:...:.:.:x:.....::..:...:....--.......:..--.......:...:x.:...x.....:..................::......:.::......x:.......:.x.::::...:.:x..x...:xxxxx::.x...:.....--:.x...----.::.:..x:.:.....:--.:...---------:.:..:...x.:...x:x.x....-...x:..x..:..x.:x:.:...:x.x...x...---------.x..:....:..:--------xx.....:::....x.:::-:::...x..:..::..:..x...:..-:.:....x..xx...---------.x..:::...---:::...xx:::....x.xx..:------....x.:x.-x..x...::xx:...:....x:.x.:.-----....------------..........::.xx:x:x..:.x.x.:...x..::--.x...x..::.x..x.------...x..------------....:.::.x.x:.----:...:::.:.x.x...:...x...x:..::.xx.:x......-.:.:.xx..--.....:-------.....:x...--...:x....x..---------------.:.x:.x:.x.:..x..x.:..:--x.......x..:--------------------..:.:.x.--x.....:x.xx..x...:......x.x:..--...:............:.....:........:..:.................:.....::.......:...........:.....x..x..............x....................:..:..:...........x..:..:x.:..x..:..x.....x.....:..:.................:.....:..:..:..:..:........:.........x.:.....:........:.....:.....:..:..:.................:.....x...x.:..:.....x........:........x........:.....:..............x.....x...........:.....:..:.....x...........:.....:...........x..:....................x....................:.....:.....x........:..:..:........:..x:..x....:.....:..:...........x.....:..:...........:..:..:........:.....:...:.:...........:.....:.....:..............:..:..x..:.....:..x........x..:.......................:x..........:........x..:..x..:...........x...........:..:...x..........x.....:........:...........x.....:.....:...........x..x.....:..:...x........ 100M2I27M1I33M3I49M2D10M2D110M2D6M4I17M2I5M9I24M1I34M9I13M8I19M1D26M1I15M9I10M3D22M6I9M1D27M5I4M12I36M2D16M6D6M12I14M4D42M1D9M2I6M7D10M2D12M15I23M2I12M20I8M2D30M2I818M 1221/1602 76.2% 1727/94230402 0.0% 160/1602 10.0% 12064804 NA +21877 chr4 + 190214555 61740931 61740930 61741545 615 AACAGTTTAACAATGAGGATATGGTGCACCTTCTGTCCTTATAATATGCAAATTAAGTGCATTTGTATCTCCAGTAAAAGCTGTGGCTGTGTAGTGATGAATAAGAACTTTAAACACACATGACACCTCGTTAAAATGTAATTTTCACATCATATATCTGAGCCCTTTACTATGACAGCTGAGTAATGTGAGTGCTGGGCAGAGAATCCTGAACATTTTGAAACTGCCACGTGTTTAATAGGTAGCT-GAATCTGCTTCCTGAATGGTTTA-GTTAAATATGGTGCACCCTCGTC-AGAAAATGGAGCCTAAAAGTAGTAGGATCTTAAATCAAACTTGTCCTCAGCCTAGGGTATG-------ATTCCTTCACAGTTCCACTTGAGATACCACAT------TGTCTCTAAAG-TTTAATTTACATCTATCTTAGTAGCTGAGTGAACTTT---------------------ACAAAAAGGAAAAAATAGTCAGCAACT------TGTTGCTAATTTCAGCCCTATCTGTATTTTTATGCATCAGCTGTTTTC--TCTGTCTGCAGAGGAG----CCCCTTCTTTTTCTTTCCAGTGCTGCTTCTTTGCTTGCAGTGACAGCTGCTGCCTGAAGGACATTGCTGCTGCTGATTTTTCAGGGAGCA chr4 + 94230402 49672963 49672962 49673607 49672963 49672962 49673607 645 AGCAGTTTTACAATGCAGATAAGGTGAACCCTCTGTCCTTATAATATGCTAATTAAGTGCTTTTGTGTCTTGGGTAAAAGATGTGGCGGGATGGTGATGAATAAGAACTTTAAACACATATGACACCTCGTTAAAATGTAATTTTCACATCATAAATCTGAGGCCTTTACTTTGACAGCTGAGTAATGTGGATAGTGGGCAGAGGATCTTGAACGTTTCAAAGCTGTCACGTG-CTAATAGGTAGCTGGAAGAGGCTTCCTGTGCTGCTTGCCTTTAATGCCACTCAGCCCTGCCTGGGAAATGCATCACAAGGGCTGCCCAATCTTAAATCCCACTTGT-----GCACAGGATATGAATTGCTATTGCTCCATGATCCCA-TTGCGATAAGACATGCTTAGCATCTCGGAAGATTCGGGCTGCAT---TTTAAAAGGCCAGCTGAGCTTTTCTGATGAGCGGCTTCTCCTGGCAGACAGGGAACAGTTTTGGGGAGCTGCTGAGTGTT--TAATTGCAGCTTCTCCTGTGTTTTTATTTTCCAGTTGCTTTCCTCCCATCT----AGGAGCATCCCCCAGCTCTCTCGCTCCTGTTCCTCTTCGTTGCTTACAGTGACAGCTGCTGGCTGC---ACAGTGATGCTG-GAAGTTTGCAGAGATCA .:......x......x:....x....x...:..................x..........x.....:...:x:.......x......x.x:.:.........................:...................................x.......x........x..................::.:x.........:...:.....:...::..:...:......-:............-...xxx........x::x.:..:-x..x...::x::x..x..::.:.-:.:.....x.x.x:..::.:x.:xx:..........xx......-----..x:...:....-------...x..:..:::.:...-...x....xx....------::....x:...-..:::x:.:...---.:.x.:x:..:::x...:....---------------------:..:.x...:..x.:.xx.x:.x.:..------....--.....x....:::x:....:.......x:x:...:..:....--:.::...----.....----....xx..:.:..x:...x..x.:x....x......:...............x...x---...x..x.....-x:.x...x...:..x.. 233M1D13M1I23M1I23M1I44M5D12M7I17M1D14M6I11M1I12M3D22M21I27M6I4M2D42M2I7M4D5M4I57M3D12M1D17M 442/595 74.3% 645/94230402 0.0% 70/595 11.8% 12067968 NA +3096 chr4 + 190214555 61750650 61750649 61750719 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -14282547 -79947855 +3848 chr4 + 190214555 61781186 61781185 61781268 83 CACAGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCGGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ............:.--....:.:...........::........x.xx.x...x..........x:.:.:x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -14252011 -79978391 +7962 chr4 + 190214555 61803892 61803891 61804116 225 CTTCCTATTCTTTGAGTGTAAAACTAAATTTTAACTTTTCCAAATTCCTTTGATTAATGCTGCAAACATAAAAGTAGGATGAA--TCTGTCAAAAATGAA-CAATTTGCACAAACAATTCCAATTTCTCAGGTGACAGCATTTTAGCACACAGAGGGGAGTTGTCAAAATTTCACTATAGGAAGTTGTATTCT--ATACAATGATATATTTTAAATTATCTTGAAAAGAA chr4 + 94230402 49689472 49689471 49689700 49689472 49689471 49689700 229 CTCCCCCCTCTCCAAATGGATCTGCAAACCTGACTTCTTCAGAAGGTTTTTGATTGAGAGAGAAAACATGAAAACAGAGAGGAAGTCTGTCAGAGTTGGATCAATTTGCCCAAACAGCTC-GGTTTTTCAGCTGACAGCATTTTAGCACTCAGAGGGGAGTTGTCAAAATCTCTCTACAGGCAGCCATGTCCTTCATGCTGAGACATAACTTATATTATCTCAAAAGAAA ..:..:x:...:::.:..x.xxxx:...::.x.x:.:...x:..xx::.......:.x:xx.x......:...::..::x.:.--.......:.:x..:.-........x......::..-::...:....x.................x....................:..x...:...x..:::.:.:..--..:.x:x..:...x:...x.......::...::.. 83M2I15M1I19M1D72M2I35M 152/224 67.9% 229/94230402 0.0% 6/224 2.7% 12114420 NA +8846 chr4 + 190214555 61808507 61808506 61808733 227 AAAAGAAACCAGAATAAAAGGAT-AGGTATCAAATTG---ACTTTACACAATTTTTGTTTGATGTTGACTTTCCATTGGTGTTTACATCATCACCTGAGAGCCGACTTTATAAATGCCAGATGGTTATAGTCAGAGTGGGACCTGAAGACAAAAAAAATCAAGCTGTTATAATGCTAGGCATGTCCAATTTTCCATCAGCACAAACAACACATTGACCTATGGGTTTTTGT chr4 + 94230402 49696047 49696046 49696275 49696047 49696046 49696275 229 AAACGGAGCCTGACTGAAGTGATTAGATATAAAATTGGCAACTTCATCACATGTTACTTTGATGATTACATTTGATTGCTGTTTACTTTTTTACCTGAGAGCTGGCTGCTGAAACACCAGATGGTTATAGTCAGAGTGGGATTTGGAG--AGGACCATGCAAGCTGTTGTAATACAAGGCAAGCCCAGCTTTCCATCAGCAACAGAGGCATCTTGACCTTTGGTATTTTAT ...x.:.:..x..x.:..:x...-..:...x......---....:.:xxx..x..xx.......x.x..x..:x....x.......x.:x.:..........:.:..x:xx...::.........................::..:..--.::.xx.xx.........:....:.x.....x.:...::............xx.:x::..:x.......x...xx....:. 23M1I13M3I108M2D81M 161/225 71.6% 229/94230402 0.0% 6/225 2.7% 12112460 NA +16992 chr4 + 190214555 61812254 61812253 61812572 319 TATTCTTAGTTACCATTATGAGGGACTCTGTATATT--ACAGTCTCTCCACTGTCTCTGCTGTTAGCTGGAAAAATGCTGGGAGCAAAGGCAGCTACTATCAACAGGGAGCCATATTAATTATTTGAAATGTGCCTCATAAGAGGAATCAGCGGAGCTTATTACAAGTCGAATATTACTTGAAATGGGAAAGTTACTCCAACTGTTATCATAATCTATGTATCATTAACTTTCCTTGTTTAGGAAAAGAGATTAACAACCCTGTAAATTGCTATAGTAAATGTGTGAAATATATAACTGCATA-TTCCCATTGTAGAAAGAA chr4 + 94230402 49699095 49699094 49699414 49699095 49699094 49699414 320 TATTCCTGGATTTCATTACAAAGAAGCCTGAAGAGTGTACCACTGCTCTGCTGCTTGTGATACTAGCTTGGAAATTGCTTGAAGCAACAACAGCAAGTGTCAACAGGGAGCCATATTAATTATTTGGAATGTGCCTCATAAGAGGAATCAACTGCTTTTATTGCAGCACGAATATTACTTGAAACAGGAAGGTTACTCTAGCTGTTATCGTAATCTATGTGTCATTAACTTTCCGTGTTTAGAAAAAGAGATTAACAACCCTGTAAATTGTTACAGTAAATAGATGAA--TTATAACAACATGTTTTTTATTATAAATAAAA .....:.:.x.x:.....::.:.:.x:...x.x.x.--..x:::x...::...::.x..x.::.....x.:...x....x.:.....x::....x.x.:...........................:.......................:.x.xx:.....:..:xx................::....:.......:.:........:..........:.............x.......:...........................:..:.......:x:....--x......x:...:-..:::...:..:.x.:.. 36M2I250M2D13M1I18M 244/317 77.0% 320/94230402 0.0% 5/317 1.6% 12113159 NA +8388 chr4 + 190214555 61820253 61820252 61820589 337 TTCTGTTCTTTAAATCTAATGTGTTCGTACATAGCATTTGGCTGCATAATTTATGGCTGTGATGGCTTTATGTGCATTCTTCAATTTACAGATTTTATTACTGAATAGGGGTGTAAATTCCAATAGTTTACTAGTGCATTAAAATCACAATACATTACAAGGTAATTAACTAGAGCTGCCACTATAAATAGAAAAATAGTCACAGCCTTCACTATAAACGACTTAATAAAAATAAGGTTCTGAATCAGCATTC--AGCATTATAGTAATTCCTCTTGCCATACGTCTCATTAATC--AGGACTTTTTTAAA-AAGCTTCTTCT-CAAAGC-------ACTATTATTTTTA chr4 + 94230402 49702980 49702979 49703318 49702980 49702979 49703318 339 TTCTCCTTCTTAAA---AATTTTATCGCTGGTGACATTTGCCCACATTGTTTATGCATGCAGTGCATTTTTACCTGCCTTTCAGAGTCCTGATGCTCGTGGTGAATAGAG-TATAAACTCCAGTAGTTTACTAGTACATTAGTGTCATCATACATTACAGGGTAATTACTCTGAGCCACTGCTCTGTATAGTAATGCAGTAATGA----CACCGTAAATCACTTAATAGAAATAAGGTGCTGTATCAGCATTTGAAACAAGACGCTGATT--TTTAGCCACCC-CCTTTTTAATTTGAGGGCATTTTCAAATTAGCTCCATATATGAAGCAGTATTAACCATTATTTTTA ....x:.::.....---...x.xx...:xx:.::......x.::...x:......xx..:::..xx...x.::x:::::....:xx.x.x...x:.xx.:x.......:.-.:....:....:............:.....:x:...:x..........:........x::x....::.::..x.:x....x..x::...x.:::----...::....:x........:.........x...x.........:--.:..xx.::x.:...--.:.x....:x.-:..:x.....:--...:.x....:...-x....:.x.x.-::....-------..:.......... 14M3D93M1D94M4D44M2I15M2D11M1D11M2I14M1I11M1I6M7I13M 218/326 66.9% 339/94230402 0.0% 24/326 7.4% 12117273 NA +28813 chr4 + 190214555 61828586 61828585 61829504 919 ATTATTTTTCTTTATAAAATCGACCCAGCTGAAATATTTTCTGATGAGTTTAAA-TGCATATGAACTAGTGCTCTAGAGACTGTCTTAATGGAGTACTTCATTTTGTACTTTATTGAAATGTGTACTTTGAAAACATTGGTGAAATTTGCCATTTCCCACCTGGCATCAGCAACAGCTGGA--GCCTGGCC--------CATTTACGATGGCCTACACTCACGCAGTACTAATCTAAAGCAAATGTCATAT------------GAAAAGCTATGTCCCTGCCCCTTCTCC---TGTTAAATGCATCTAAGACAAAAGTAAGAGCATAATATTTTATTTAAGCTCAG-CTATTTTTCTTTTTCTCCTCTTCCCTTACCATTTCTGTTGCTCTAAAACTA-TTTCTCGTGGTCATGCTCTTAACTGAGATATTTGTAGGGAAATGATTTGTTTTAAATGAGCAGATGGGCCAGACTTAAGACAAGCTGCTACATTAATAAACATGTGTGGTACTTTATCAGTAAAGGAGCCTATTTTGACATTTCTTCTGGATGATTTGTATAGCCTATCACTATCACACCTGGTGCAGGGACAATAAATGGGCACTTAATAGTCAAGCAGTGTGCGAACACCTTCCATTATAACTTCATTATGTCAGATATGATCATCTGTTACTGAATGTCAGGCACTTAATTTATGATCAGTTGCCCTATGGAATTAGTGACCAAACAAATGAATAG-TCCATTCGT-----GTAACTTTTGCTGTAAATGTATTTCTCCTAATACCAACCCCCTTTTTTTAAGCACATGGACTTAA-TCTGATATCCTTTGGGATTTTAAAACATAAGATGTTTTGT-TTTATATTTGTGAAATTTGAGAAGTGGGAAAATGTGAATAACATATGATGTAAAATTCCATACTCAATTATGTTAATGCC--CGTATCTGTTTAAAA chr4 + 94230402 49706593 49706592 49707532 49706593 49706592 49707532 940 ATTGTTTTAATTTTTAGGCTTTTTTAAGATACAGTATGATCTGATATGCTCAAAGTGGACAGAGATGCCTACCCAGGAGATTGTTTTGACAATGAGTTTCATTTTCCAGTGTATTGAGTCGTGCCACTCACCATCAGTGGGGGAGGTTCTCA---CCTGCCCAGCAGTGGCAACAGCTGGAAAGCAGAGCCAGCTATGGCATACATAGCAGTACACCCTCAAGCATCACTAATCCAAAGTGAATGTCCTATTACCAGCTTGAGAAAAAGCTGT-----TGAACTAATTCAATGTGGAAAATGAATGCAATGCTACAT--ACAGCACAAGACTCTTCTCAAActttttctttttcttttttttttcttttttttttttttttcattttctGCCAAACTAATTTTTGGCTACCCTTCTTTTTTCTGAAATATTTATAGGGCAAATAACTGTTTCAAATGAGCAGATGGGGGAGACATAAGACAAGCTGTTAAATTAATAAACATGTGTGGTGCTTTATCAGTAAGGGAGCCCATTTTGGCATTTCTTCTGGATGATTTGTATGGCCTATCACCATTGCACCTGGTGCAGGGACAAGAAATGGGCACTTAATAACCAAACAATGTGCAAACTCCTTCCATTATAACTTCATTATGTCAAATATAATCGTCTATAACTAGATGTCAAATCCATAATTTATGTCCAGCTTCCCTGTGGAA-TAGTGGCCTTATGAATGAATGGCCCCATTAATGGGAAGGAGCTTTTACTGTAACTTTTCCCCTCCTGGTACACAATCCATTTTGT----CATCTGGTATTAATTCTGAATCACTTCAGGGCTACAGAAAAAAATGCCTGTTATATTTATATTTGTGTAATGGGAGAAGATAGCAAA--TAAATCGTACAAGAGATCAAATTTCAGGTCCACCGATTTCCAAAACAGTGTGTCTATTTAGAA ...:....xx...x..::x.:xx::x..x.:x.:...xx......:x.:.:...-..x.:.x::.:xxx.:.:.x:....:...:..:.:::x.x::........x:.x.x......:x:...:xx:.::xx.x..x...x.:.:x..x:..---..::..::...x::............--..xx:...--------...x:.:::::.:x:..x....x...x:.......:....::......x...------------:.......:.-----..xx.:xx:..x---..xx.....x..x:..x:.x.x.x--.x....:..x.:.:.x:.:..:..:xx-..x...:.:.....:.:..:..:::..x::x....xx..x..x:x......-...:.x.:x::.x.x..:..xx....:......:.....x..xx.x:.....:...............xx....x............:..x...................:............:......:......:.......................:.........:..::..................x................::...:..:.....:...x..........................:....:...:...:.x...::......:::x.x.........x:...:.x....:.....-.....:..xx.::.......:.-:.....x:.-----.x.:.....:......x.x.x:::.....::...xx.x:..x....x.----..:x...xx....-.....xx:x...::..::.x:.:..x.x..x::x.x..:.-............x...xx......xx:.x...--.:...x::.:.x..x:.x.....:..x:::..x:x..x.:x.x:x.--:..:...:....:.. 54M1I97M3D26M2I8M8I52M12I10M5D12M3I24M2D27M1I51M1I316M1D22M1I9M5I48M4D13M1I40M1I32M2D46M2I15M 616/902 68.3% 940/94230402 0.0% 55/902 6.1% 12121993 NA +3276 chr4 + 190214555 61839514 61839513 61839575 62 GAGGAAAAAAAAGTATACTTATGGTAGTTTTTTGTTGTTATTGTTGTTGTTTTCTTTATAAT chr4 + 94230402 83631665 83631664 83631726 83631665 83631664 83631726 62 GAGGATGAAATAAAGTATTTTTGGTAGCCTTTGGTTGTTGTTGTTGTTTTTTTTTTTATTAT .....x:...x.:x:..:..x......::...x......:........x....:.....x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -21792151 -72438251 +9872 chr4 + 190214555 61841911 61841910 61842242 332 TAAATGACCGAAATTTGGCTTTAGCTGTCCTTAGTAAGAGCCAGCAGGGTTGACACCATGGGTATTTTGCAATCATTTGTTTAATTAGCTGAATCTCCTAAGGGAAAATTATATGAAATGGCAAACTCTCAAAGCCTAATTTAAATCTGCTTT--TTTTTAAATGTACAACAGAATTTCATAACACAGAG-ATGTTAAAAAGGCACTAGTGAAT----------AAATTCTATACAGTTAA-----AACATTTTAATACCAAAAGCAATAAACTACAGAGAAAAGTGAAAATAAATTAGGTCAAAATATTATACACATGACAGAACTGAGGT-AAATATTTGCAGGTGGCT chr4 + 94230402 49712602 49712601 49712940 49712602 49712601 49712940 339 TAAATAACTGCAGCTTGGAGT-AGATATTTTGCATATAAGCTGACAGGGCTGACACTGTGAGTATTTTGCAATCATTTGTTTAATTAGCTGAATCTCTTTGGGGAGAAGTTTATGAAATGGCATACTCCCAAAGTCTAATTTAAATCTGTTTTGCTTTTTTGATGGAGGAC------TCATAATGCAGAGCATTAAAAAAACGTATGAGTGAATGGAAAGCAACAAAACCCCTTCTGTTAATGGGCAGTTCCTCAGTAACAAACTTGCCCAAATATAGAAAG----GAAATTACATTGGGT-AAAATGACCTACAAGAGGGGAAATTGGAATCAAGTCCATGCAGCtgtct .....:..:.x.::....xx.-..x.:.::.xx:..x:...:::.....:......::..:....................................:.x:....:..x.x............x....:.....:..............:...--.....x:...x.x:..------......::.....-..xxx.....x.:.:x.......----------...x:.:x.x.x.....-----.::x::.:.:..x....xx::x:x..x..:...:.:----....x..x...:...-.....:x:x....x:x.:x::..:..:::.-..:.x:x.....x..x.. 21M1D131M2I16M6D13M1I23M10I17M5I36M4D15M1D30M1I18M 224/320 70.0% 339/94230402 0.0% 31/320 9.7% 12129309 NA +3101 chr4 + 190214555 61844545 61844544 61844597 53 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 + 94230402 1494994 1494993 1495046 1494994 1494993 1495046 53 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATAT ...:::...x.:.........x.:......x........:.:..:...:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 60349551 NA +3003 chr4 + 190214555 61844553 61844552 61844600 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:..x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 60349553 NA +3904 chr4 + 190214555 61846170 61846169 61846259 90 AGGGGAGTATGGAGATGCACACTTGTAGTCCTAGCTACTTGGGGGGCTGAGGCAAGAGGATCTCTTGAGCCCAGAAGTTTGAGGCTGCAG chr4 + 94230402 76033188 76033187 76033277 76033188 76033187 76033277 90 AGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x::..::x..xx.::...x......:.:.........:::.......x.xx.x.:.x.x.....:........:..x:.....:.. 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% -14187018 -80043384 +3053 chr4 + 190214555 61846934 61846933 61846982 49 ATATTTTATATATTATGTGTGTGTGTGTGTGTGTGTGTATATATATGTA chr4 + 94230402 72529254 72529253 72529302 72529254 72529253 72529302 49 ATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x.x...:..x....::::...................:......:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -10682320 -83548082 +3053 chr4 + 190214555 61846934 61846933 61846982 49 ATATTTTATATATTATGTGTGTGTGTGTGTGTGTGTGTATATATATGTA chr4 + 94230402 72525681 72525680 72525729 72525681 72525680 72525729 49 ATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x.x...:..x....::::...................:......:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -10678747 -83551655 +4022 chr4 + 190214555 61847838 61847837 61847940 103 TATAATATAAAATATATTATATAT--AATATAAAATATATTATATATAATATAAAATATATTATATATAATATAAAATATATTATATATATAATATAAAATATAT chr4 + 94230402 71903454 71903453 71903558 71903454 71903453 71903558 105 TACATTATCGAATGTATTATATATGAAATGTTAGGTATTTTAATCATCATATGTATTATGATTTATATAAGATTAAACATGTTACATATATAATGCATTATATAT ..:.x...x:...:..........--...:.x.::...x...xx:..x....:x.x...:x.x.......x..x...:..:...:.........::.xx...... 24M2I79M 74/103 71.8% 105/94230402 0.0% 2/103 1.9% -10055616 -84174786 +3776 chr4 + 190214555 61847859 61847858 61847963 105 TATAATATAAAATATATTATATAT--AATATAAAATATATTATATATAATATAAAATATATTATATATATAATATAAAATATATTATATATATAATATAAAATATAT chr4 + 94230402 71903454 71903453 71903558 71903454 71903453 71903558 105 TACATTATCGAATGTATTATATATGAAATGTTAGGTATTTTAATCATCATATGTATTATG--ATTTATATAAGATTAAACATGTTACATATATAATGCATTATATAT ..:.x...x:...:..........--...:.x.::...x...xx:..x....:x.x...:--..x.......x..x...:..:...:.........::.xx...... 24M2I34M2D45M 75/103 72.8% 105/94230402 0.0% 4/103 3.9% -10055595 -84174807 +3070 chr4 + 190214555 61851538 61851537 61851622 85 CATGATCATGCCACTGCACGCCAGCATGAGCAACAGAGTGAGACCATGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAATTGAGGC chr4 + 94230402 88382688 88382687 88382763 88382688 88382687 88382763 76 CATGGTCATTAAACTGAGC---------AGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGC ....:....xxx....x:.---------.....x:...::....x::x.........::.:..............:x..x..:.. 19M9D57M 55/76 72.4% 76/94230402 0.0% 9/76 11.8% -26531150 -67699252 +3511 chr4 + 190214555 61856550 61856549 61856651 102 TCTCTCTGTCTCTCTCTCTCTTTCTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGATGGAGTCTTGCTCT chr4 + 94230402 40565603 40565602 40565704 40565603 40565602 40565704 102 TCTCTCTGTAACACACTGTTTTTTCCTCTGTCTTTGGTCTTTCTCCTTCGGCCTTTCTTTTGTTTTACTCTCTTGCTTTCTCTTACAACAAACACTCCCTCT .........xx.x.x..x.:...::....x.....xx...:....::..xx:..:.:....x....x:.:.:..x:...:.:..:.:.:::.xx..:x.... 102M 65/102 63.7% 102/94230402 0.0% 0/102 0.0% 21290947 NA +3091 chr4 + 190214555 61856558 61856557 61856631 74 TCTCTCTCTCTCTTTCTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757785 53757784 53757857 53757785 53757784 53757857 73 TCTCT-TCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT .....-..:x.....:..x.::::.xxx.:.:.:.:.:.:.:.:...:........::.......:........ 5M1D68M 50/73 68.5% 73/94230402 0.0% 1/73 1.4% 8098773 NA +3072 chr4 + 190214555 61856568 61856567 61856620 53 TCTTTCTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 17384392 17384391 17384444 17384392 17384391 17384444 53 TCCTCCACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ..:.:.x..xx.x:..x..xx................................ 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 44472176 NA +3016 chr4 + 190214555 61856573 61856572 61856612 40 CTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTT chr4 + 94230402 38525370 38525369 38525409 38525370 38525369 38525409 40 CCCTCCCTCTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTT .:...:.....:...:......:........:........ 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% 23331203 NA +3095 chr4 + 190214555 61856579 61856578 61856662 84 CTCTTTT-TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGATGGAGTCTTGCTCTTATCACCCAGG chr4 + 94230402 22159416 22159415 22159500 22159416 22159415 22159500 85 CTCTTTTGTTATCTCTCCCTACCTCACTGCTTTGTCTTTTTTTTTTTTTTTCCTCACTAATAGAGGTTTGTTTGTTTTAATCAAG .......-..x......:..x:...x..x:...x.:...............::.:xx::..:...x:...:.:x.x.:.x:..:. 7M1I77M 57/84 67.9% 85/94230402 0.0% 1/84 1.2% 39697163 NA +3029 chr4 + 190214555 61856580 61856579 61856616 37 TCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 26578261 26578260 26578297 26578261 26578260 26578297 37 TCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT ...xx................................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 35278319 NA +3049 chr4 + 190214555 61856582 61856581 61856621 40 TTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 6554017 6554016 6554056 6554017 6554016 6554056 40 TTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..x..x:.................:............... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 55302565 NA +3234 chr4 + 190214555 61856583 61856582 61856619 37 TTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554020 6554019 6554056 6554020 6554019 6554056 37 TTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..x.................................. 37M 36/37 97.3% 37/94230402 0.0% 0/37 0.0% 55302563 NA +3012 chr4 + 190214555 61856584 61856583 61856619 36 TTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 68982956 68982955 68982991 68982956 68982955 68982991 36 TTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ....x...:........................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -7126372 -87104030 +3670 chr4 + 190214555 61856909 61856908 61857067 159 TCCTCCCTCCCTCCCGC-----CCTCCCTCCTCCCTCTTTCTTCTTCTCT------------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT-----CCTCCCTTCCTTCCTTCCTTCCCTTTCTCCCTCCCTCCCTCTCTCTCT chr4 + 94230402 19215387 19215386 19215566 19215387 19215386 19215566 180 TTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTAT-CCTCTGTCTCT .:......xx.x.....-----..:..::..:...:.:..:..:..:.:.------------......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x.....-----.:..:...xx:.::..:..x..:.x.x.:::..:x.-.....x..... 17M5I28M12I66M5I36M1D11M 102/158 64.6% 180/94230402 0.0% 23/158 14.6% 42641522 NA +3182 chr4 + 190214555 61856919 61856918 61857063 145 CTCCCGCCCTCCCTCCTCCCTCTTTCTTCTT------------CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CCTTCCTCCCTTCCTTCCTTCCTTCCCTTTCTCCCTCCCTCCCTCTCT chr4 + 94230402 19215406 19215405 19215566 19215406 19215405 19215566 161 CCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTAT-CCTCTGTCTCT .:...x..::...:..:..:.:...:..:..------------:.....x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x..:..-----.:.::..:xx:.::..:..x....x:x...:..:x.-....:x..... 31M12I66M5I36M1D11M 89/144 61.8% 161/94230402 0.0% 18/144 12.5% 42641513 NA +3422 chr4 + 190214555 61856928 61856927 61857045 118 TCCCTCCTCCCTCTTTCTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTCCCTTCCTTCCTTCCTTCCCTTT chr4 + 94230402 63697122 63697121 63697234 63697122 63697121 63697234 113 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT-------CTCCCCTCTTTTCTTTCTTCCTTTT .:....::.::..:xx:x.:........:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......-------.....:..:..:...:.....:... 55M2I31M7D25M 73/111 65.8% 113/94230402 0.0% 9/111 8.1% -1840194 -92390208 +3179 chr4 + 190214555 61856952 61856951 61857077 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTCCCTTCCTTCCTTCCTTCCCTTTCTCCCTCCCTCCCTCTCTCTCTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT---TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..---..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x::.:xxx....:x:.::...x:xx:.......:.:..:::::...:...::....:.x.:. 16M3D107M 72/123 58.5% 123/94230402 0.0% 3/123 2.4% -1840165 -92390237 +3341 chr4 + 190214555 61856956 61856955 61857081 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTCCCTTCCTTCCTTCCTTCCCTTTCTCCCTCCCTCCCTCTCTCTCTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx..:..x::::xxx....:x:.::...x.xx...::...:.:..:::.:...:....:....:.x.:. 13M3D110M 73/123 59.3% 123/94230402 0.0% 3/123 2.4% -1840161 -92390241 +3200 chr4 + 190214555 61869908 61869907 61869988 81 AGCCTGGGCAACAAGAGCAAAACTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAG chr4 + 94230402 43459364 43459363 43459440 43459364 43459363 43459440 77 AATCTGGACAAATAAAGGAAA----TATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAG .::....:...xx.:..x...----.:.x:x.............x...x.....x...xx........:.......::x.. 21M4D56M 57/77 74.0% 77/94230402 0.0% 4/77 5.2% 18410544 NA +3003 chr4 + 190214555 61869926 61869925 61869976 51 AAAACTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAA chr4 + 94230402 48830762 48830761 48830812 48830762 48830761 48830812 51 AAATTTTTGCATACAGAAGGAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGA ...x:....:xx.x.:..::............................::. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 13039164 NA +3155 chr4 + 190214555 61869932 61869931 61870045 114 TTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAGAAGAAAGAAAGAAAGAGAAAGA chr4 + 94230402 41925056 41925055 41925169 41925056 41925055 41925169 114 TCATTGGAGGAAAAAAAAAACAAAAAAAAACACAGGGAGACAATCAGGTACATCACGTGAAAGTGAAGGAATAACAGAGTAAGGCGGAGGGAAAGCATGAGAGCAAGAGAGAAA .::..::.::..........x.........x.x..:....x.:xx..:x.x.xx:x.x.::..x..::..:x:.x....x....x:::::::...x.x..:..x......:.:. 114M 68/114 59.6% 114/94230402 0.0% 0/114 0.0% 19944876 NA +3095 chr4 + 190214555 61869944 61869943 61869979 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ................................:.:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -13430512 -80799890 +3047 chr4 + 190214555 61869945 61869944 61869994 50 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAG chr4 + 94230402 66158979 66158978 66159028 66158979 66158978 66159028 50 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAG ...::.......:.................:..:x...:x...:.x:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -4289034 -89941368 +3510 chr4 + 190214555 61869945 61869944 61870023 79 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAG chr4 + 94230402 46677676 46677675 46677754 46677676 46677675 46677754 79 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAAAGAAAG ..............................x..x.xx.x.::...:::xx.....x...:.x:x:x.xx:......... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% 15192269 NA +10188 chr4 + 190214555 61873437 61873436 61873719 283 TCTCCTTAAGTAAAATAGCAAAATAAAACCAATTTTTAAATAGTAATGTGTGATTTGAGGAAGTGTGTCTTAGAAGCACTGAATCACTAGAAATTGAAAAAAGCATAATCTGTATTTCTGAAAGCCATCCAGTTTCCGTTT-ATTTACAACCTTTGAGCCATTTCACAAATTGAAAAGCAACCATCCAGCCATTTCATGTTTAGATTATTATATATTTAAAAGATCCTAAGACCATTATCAGCATGCA-GTAGCCCTCTCACTGAACAA-AGACAGATTAGAGGTA chr4 + 94230402 49730603 49730602 49730884 49730603 49730602 49730884 282 TCTTCTTCAAGATAAGAGCACAACACAATCAGGTTTTAAATATTCATATACAGATCACAGCAGTGTAGCTTGGAAGCACCGAATCATTGAGAATTGAAAAC--TCTAATCTGAACTTTTGAAAACTGTCCAATTTCTTTTTTATTTACAGCCTTTGAACTGTCTCACAAATTGGGAAGTAACTATCCAGCCATTATGCAGGCAGATTATGATATGTTTAAGAG--TCCAAGGCATTTATCTGAACACATTTGGCTGTCTTGCTCACTAACATCTAGATTGGAGTTA ...:...x.:x.x..x....x..:.x..:..:x.........x.x..:.::::x.::x:.x.....:x...:.......:......:.:::.........x--:x.......x.:..:.....:.::....:....:x...-.......:.......:.::.:..........::...:...:...........x::::xx:.......x....:.....:..--:.:...:.xx.....x.x.::..-x.:..:x...::..x.x:..-.xx:.....:...x.. 101M2D38M1I81M2D23M1I20M1I16M 191/279 68.5% 282/94230402 0.0% 7/279 2.5% 12142834 NA +3413 chr4 + 190214555 61880671 61880670 61880811 141 TGGTAGAATGACTTAATTTATCTATCAAGTATATACTCTGTACGCTGATTATTAAGTGTTTTAGAAGGATTTACAATTTTTTTGTGGTTTCACTTGAATTCAGGAATCATTTATATGCCAATTATGCAGCTCTTTCTTTTT chr4 + 94230402 49735431 49735430 49735571 49735431 49735430 49735571 141 TGGCAGCCTTAGGTAATTTGGAGGTTTGATCTCTGTTCTGTGCTATAGAACTTAGGTAATTGTGCACAGGTTGCAGTCTATTCGCGGTTTTGCTTGGATCTGAGAATCATTTATATGTAAATGATGCTGATCTCTTGTTCT ...:..xx.x.xx......:xxx:.:x::.x.x.::.....:.xx.::xxx...:..:x..xx.x.x::x..:..:.:.x..:.:.....::....:..::::..............:x...x....x.x...:.:x..:. 141M 82/141 58.2% 141/94230402 0.0% 0/141 0.0% 12145240 NA +3449 chr4 + 190214555 61883489 61883488 61883571 83 TTTCCATTATTCT----CCTCAAATAAATACAAGTATATTATTATCTCCATTTAGCAGATGAAAAAAATCTAAGGCACAGAGAGGCA chr4 + 94230402 16696148 16696147 16696234 16696148 16696147 16696234 87 TTTTCCTTATTCATACACATCAGATAAACACCAGTATATTGTTATCGACACTGTGCAGAGATAGGGAAACTGAGGCACAGAGAAACA ...:.x......x----.x...:.....:..x........:.....xx..:.xx.....x:x.:::..x..:...........::.. 13M4I70M 60/83 72.3% 87/94230402 0.0% 4/83 4.8% 45187341 NA +9179 chr4 + 190214555 61892636 61892635 61892917 282 TCTTTCTAATTTTATTTCAGATATCTCTACCACAGGACCTCTTGGCATGGGAAGCACTACCACCAGTACCACCCTTCGGACCACAACTTTGAGCCCAGGAAGGAGTACCACCCCGTCAGTGTCAGGAAGAAGAAACCGGAGTACTAGTACCCCATCTCCAGCTGTCGAGGTACTTGATGACATGACCACACACCTTCCATCAGCATCGTCCCAAAT---CCCAGCTCTCGAAGAGAGCTGTGAGGCTGTGGAAGCCCGAGAAATCATGTGGTTTAAGACTCGTCA chr4 + 94230402 49739052 49739051 49739336 49739052 49739051 49739336 285 TCGCTCTGGCTCTGTTTCAGGGGTATCGACATCAGGGGCACTGGGCCCAGTGAGCACCACTACCAGCACCACGCCACGAATGGCTACCAGCAGCACTGGTCGCCCCACCACCACCTCGGCCTTGGGCAGGAGGAACAGGAGCACCAGCATGCCCTCACCCATGGCTGATGTCCCTGATGAGATGACCACGCACCTCCCGCCCGCCTCCTCCCAGCTGCCCCCAGCTGGTGCCGAGAGCTGCGACCCAATGGAAGCCCGTGATATTATGTGGTCTCGGACCCGGCA ..x:...:::.:.:......:x:.x..x..xx....:x.x..x...x::.x:.....:..:.....:.....x.:x..:.:x:.x..:xxx...x.x..xx.xxx:......x.x..:.:x.::..x..:..:...x....:..:..:.:x..x..x..x::x.::..x..x.:......x........:.....:..::.x..x..x.....:x.---.......xx:.xx........:..xx.x:..........x..x..:.......:.x:...:..x.. 216M3I66M 181/282 64.2% 285/94230402 0.0% 3/282 1.1% 12153584 NA +4180 chr4 + 190214555 61892992 61892991 61893122 131 TTGTGTTGCTTTGGCTTTATTTTCTAGTATTCTTTTCCTTTTCCTTCCTCCTTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTGTCTCTTT---CTTTCTCCTTCCTTCCTTCCTTCTTTCTTTCTCT chr4 + 94230402 53764509 53764508 53764635 53764509 53764508 53764635 127 TTGTATTGTTTTAG-TTTAGTTTCAAA----CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCT--CCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCAGACTCT ....:...:...:.-....x....x.:----....x.:......:::...........::.........--.:x.x:..x.::.:.....::...:.---:......x...:.x:.x...:.::.:.xxx.... 14M1D12M4D38M2D26M3I34M 87/124 70.2% 127/94230402 0.0% 10/124 8.1% 8128483 NA +3865 chr4 + 190214555 61893009 61893008 61893193 185 TATTTTCTAGTATTCTTTTCCTTT--TCCTTCCTCCTTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTGTCTCTTTCTTTCTCCTTCCTTCCTTCCTTCTTTCTTTCTCTCTTTCTCTCTTTCTTTCTTCTTTCTTTCTTTCCTCTTTCTTTTTTTTCATTACAACATATTTTATTACTTC chr4 + 94230402 71957332 71957331 71957512 71957332 71957331 71957512 181 TATTTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTT----TTTTTCTCTCTCCTCTTTCTCTTGTAGGAT--CAGTACTTTTTCCCACTTC ........::::....x:::..:x--..:.x....:..x:..:::.....::..x:x.::x....::...:...x.:xx..:x..x.......:xx:...xx:xx..:...xx::.x..:.xxx:.......----...:.:...:..........:..x.xxx..--..::.:x....x::..... 24M2I106M4D30M2D19M 108/179 60.3% 181/94230402 0.0% 8/179 4.5% -10064323 -84166079 +3201 chr4 + 190214555 61893022 61893021 61893089 68 TCTTTTCCTTTTCCTTCCTCCTTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTGTCTCTTTC chr4 + 94230402 45957264 45957263 45957331 45957264 45957263 45957331 68 TTTTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTC .:....:..................:x.:..x:.x.:x:.::..::.x..:..:..x..x....:... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 15935758 NA +3330 chr4 + 190214555 61893068 61893067 61893147 80 TCCCTCCCTCCTTGT--CTCTTTCTTTCTCCTTCCTTCCTTCCTTCTTTCTTTCTCTCTTTCTCTCTTTCTTTCTTCTTTCT chr4 + 94230402 57538430 57538429 57538511 57538430 57538429 57538511 82 TCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ..:..:.:xx:....--..:......::..x:...:........:..x.:x..:......:..:.x..:.:.:.:..:.:.. 15M2I65M 54/80 67.5% 82/94230402 0.0% 2/80 2.5% 4354638 NA +3241 chr4 + 190214555 61893684 61893683 61893729 46 AGATAAGAACTCAATATTTCTTTGCCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 28615144 28615143 28615189 28615144 28615143 28615189 46 AAATTAGAAATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTT .:..x....x.............x..:...:............... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 33278540 NA +3475 chr4 + 190214555 61895342 61895341 61895395 54 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::........x.xx.x...x...........:.:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -14137869 -80092533 +14811 chr4 + 190214555 61896194 61896193 61896492 299 CTTTGGAATCTTAAGCCATCTGATAAATGTTCTGTA--ACCTAATCATTTATCAATGATAAAAATATACACATGTGTGACAGAATCTTGCAGACTCAA-ATTTTCAGGGCTTATTTGGTTGCAATATGTTGAACATTTTTATTATTAATGCACTGTGGGGCTTTGAATTGATTTCATTACAAACAGAGACCAGATGTGCATTTATGCCAAAAGGGTTATGGGATGAATCCTTATTATAGCAATTTATGTGGATTTATGCACTCCT-------AAAATGGAGAGTCCTTCTATGGCACATTAGCTATGCT chr4 + 94230402 49742192 49742191 49742495 49742192 49742191 49742495 304 CTTTTTACTCCTAAGTCCCTTGATGAATGTTTTGTAGCACTTCATCATTTATCACTGTTAAAAGTACATTAACATGTGACAA-----TGGAAGTTCAAGACAAGCAGAGCTTATTTGGTAGCAATATGTTGAGCATTTTTGTTATTAATGCACAGTGGTGCTTTCAGCTGATTTCATTACAAACAGAGACCAGATGTGTGTTTACGCCACAGAGTCTGTGGGCTGAATCCTTATTATAGCAATTTGTGTGGATTTATTTGCTTCTTTAGCAGGAGCAAGAAAGTCCCAGTGTTGCACGCTAGCTGTGCT ....xx.x..:....:.x::....:......:....--..:.x...........x..x.....:..:.:xx.::.......:-----..x.:::....-.:xxx...:...........x............:.......:............x....x.....x.::..............................::....:....x.::.x:.:....x......................:...........x::..:..-------:.:xx:..:.....:xx.:.x....::.....:.... 36M2I44M5D11M1I166M7I37M 226/294 76.9% 304/94230402 0.0% 15/294 5.1% 12154002 NA +11610 chr4 + 190214555 61909553 61909552 61909753 201 ATTATAGTTGAAATCTGGTGAAACAGCTGCCAACATTGCTAGAGAGCTGGCTGAACAGACAAGAAATCACTTGAATGCTGGGGACATCACCTACTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCTAGATGTACAGCTTCGGAACTTGACCCCAGGTGGAAAAGATAGTGCTGCCCGGAGTTTGAACAAGGTAAGGAC chr4 + 94230402 49748410 49748409 49748610 49748410 49748409 49748610 201 ATTGCAGATGAAGTCAGGGGAGATGGCTGCCAATATTGCCCGAGAGCTTGCAGAGCACACCAGAAACCACTTGTATGCTGGTGACATCACATACTCCGTGTCTGCCATGGTCCAACTGGTGAACTTGCTTGATGTACAGCTCCGAAACCTGACGCCAGGTGGGAAGGACAGTGCTGCACGCAGCTTGAATAAGGTAAGAAC ...::..x....:..x..x..:.::........:.....:x.......x..x..:..x..x.....:......x.......x........x.....:..x:xx.......x...:.....:::.:.x..x...........:..:...:....x........:..:..:........x..x..:.....:........:.. 201M 155/201 77.1% 201/94230402 0.0% 0/201 0.0% 12161143 NA +21443 chr4 + 190214555 61910892 61910891 61911960 1069 TTTTTTTTTTTTCCCCTGCAATTTCATCTGTAAAAAACAGGTAAAGTTTTATTATTAGATATAAATTATTATTATTATTATTTTTCATTCTGAGCATAAAGGAGTT----ATTTTTGTCACTTATGCCCTTGATAGAATCACAACCAGTTGCCTGATGGAATATAATCCACAGCTACCTATATAATCTGGGCGTGCTGTGATTTTAATGCGTTGTTGCCCAGACTGGCTGGATGCTATTAATGAATATTGCTGCCAGCTATTGTTATCATAAT-GTACCGGATGTAGTCATTTCTATTAA-TGTTACATATCCATAACATGACTTGTTATAGCAATACTTTGTATCTTTATTTAAAAATGGTGTTGATGTCTGACAATATCAGGTAAAGCTGGCAATTAATGTCACATTCTAACTGGCTACAGC----TAATCAGCTTGCCTACTCTGAATATCAAATAACTAAATAATGGGCAAATTTCCATTTGTGAAGCTTTTTAA-----TGCTTTTCTTTTGTTA---CCCATTTGGCTCTTTTCAGTT-GTTTATATAATGTGG---TTTGTCATATGTTAATTTGCATGATGGGGTAAGGAGATGGGAGG-GCAAAGGTTATTCACATGCTTGCTGG----------------CTTGCTCTCATTTCCTGTGGTTCTCACTTTCCCTGAAGCAG--TTATAACCTA---TCAGATTTGCAAAGTCAACTCAGTACAAATCAATCGTGCTCTGTATTGAAATTCTGGAGGGTTTAGAGTCCTGCAAACCA-CGATGCAAGTCAGTGATCCAAGTGACAGCCCTGGCAATTTACTTGCACTCATTCCTTACTTAATTCTTTAGAGGAGTAACTGCTCTATGCTCATTGAAGAATGCATGAATTAGAATTGGGAG-AGTATAGGCCACACAAAAGGCATCTGGGTAACTGCTTCTTAAAACTGGGTAATTTTCTCCTTCAACAATCAAGGCTACT-------------GAGGAAAAAAAAAAATTGGAAAGAAGAGGAAAACCCAC---AAATGAATTTATAAAAATTTGGCTTATTTATTTAAACATGGTGGATGAACT--------GTTATTAGTTATTCATTTTATCACCAGGAAATAATGT chr4 + 94230402 49749706 49749705 49750734 49749706 49749705 49750734 1029 TTTTTTCTGTATCTTCAGAAGAGACATATTTTTCAGAGAAGTAACGTTGTCTTTTT-GTTGTAAGATATTACTGTTGATATATTTTCTTTTAAATGCGAAGGGCTTCAGGATTGTT-----------------TAAGATTACAGCCGTGTG------GGAACTGAAGTCAT-----CCTGCATA---------TCATGTGCTTTGCATGTGCTGTGAATTGGGTTATCCTGATGCTTGTAATTAGTGCTGCTTGCAGCTATT----TTATAACCGTGTCAGAAATAAT----TGTATTAACTGTTACATCAGCATAACATTTCT-GTTATAATCAAACC--GTGGTTTTGTTTGAAA-TTATGGTGATATCTGACAATATCAGGTAAAACTGGCAATTAATGTCACCTACTAACAGGTTTCATGATTGTAGTCTGCTTGC-TCTTCTGAATATGCCCTCGCCACACC-----CAACATTTTGTCACCTCAGCTTTGCAAGCACATATTTTTCATCTTTTAAATCCCACCTCCTGCTGTTCATTCCGATTACACAAAATGGGGCTGTGTCTTG-----------GTGACGGG---------TGGGAGTTACCAAGGGGACTGACAGGTTCGGTGAGGCAGAGCCACTCAGCTCTGCTGTCACT-CCTGTGGTTCCCGTT---------GCAGGTTTTTCACCCACCATCAGCTTTGCACAAGCAGCTTA-TACAAATCAATTGCACTCCACATTAAAATTCTGGACCGTGTGGAGTCCTGCAAAACAGTGACGCGAGTCAGTGATCCAAATGACAGGTTCGGTAATTTACTTGCTCTCATTCCCCACTTAATTCTTTAGAAGAGCAACTGTTCTGTGTTCATTTAAGAATGCATGAATTTGGTTTGGAAGTAGTATTGGGCAAACAAAAGGCAGCAGAGTTACTGCTCC-------------ATTTTCCCCTTCGCTGATCAAGAGTATTTCCaaaaaggagagaggaaaaaaaaaa-----aaaaaaaggaaaaaGTCATTTGCAAGGAGTTT----TAGTTGGTGTTGTTTGGTCAGAAAGGAGAAATAAAGTGAGCACTAGCCATTAAATATTCTTTCAATCATTAGAGGA-AATGT ......:.x.x..::.x.x.:xxx...x.x.xxx.:.x.:....x...x.x..x..-.x.:...:x.....:.:..:x...x...:x..:.:.:::::....:x..----...x..-----------------..::..:...:..:xx..------....:xx..x:..:-----...::...---------.xx....x...xx...:.:...x:x:::.::.:x.:x......xx....x.:.::....xx........----.:....:-..::.:..x:..:.----.x......-........xxx........xx..-......::x.x..:--..:x:...:...:...-.x:..x....:...................:.................x.x.....x..:.x..xx----..:..x......-.x:.........xxxx.x:.:.x.:x-----...xx..:::.:xx:xx......x:..-----.::.....x.:.x...---....::.xx:x..x....x.:-.x...:.:..x:...---.x....x.:-----------:...:...---------......x-:.x....xx.:.x...x.:.:.x..:----------------::....x...:.-..........:.::.---------....--..x.x...:.---....x......x.:x..:..:.-...........:.::...:::...:..........xx..x.:............x..-:..:..:..............:......x:::..:...........x........::...............:...:.....:...:..:.....x...............x.:x....:..-.....x..x..x..........x.x.:..x......:.-------------......:.....:x::......:x..:.-------------..............-----...:..::.:....x:..:---x..x..:...----x.:..x.xx..:...:x.:.:.x.x.:x::..:..x.--------.::....:x.....x..:x....::..:::.-..... 56M1D49M4I6M17D18M6D14M5D8M9D69M4D7M1I14M4D8M1I23M1D14M2D16M1D66M4I12M1D26M5D27M5I16M3I21M1I15M3I9M11D8M9D7M1I26M16I12M1D15M9D4M2I10M3I22M1D57M1I122M1I38M13D28M13I14M5D19M3I10M4D37M8I31M1D5M 668/959 69.7% 1029/94230402 0.0% 180/959 18.8% 12161186 NA +12383 chr4 + 190214555 61912509 61912508 61912811 303 TAGGTTGTTCTGAAAGGATGTTGGCTACTATTTTTTAAGCCATTGCTTGCTTACATTTTGCTGCTGCTTAGCTTTCATTTTC-----------------TTCTGAAAAGTAGTGAATGACAAAATAAGGTGTTTTGTGTAGATGTGTTCTTTTATTTTTCTTGTTTTCTTCTGTCACTAACTTGTTTTTTCTATTCTGTGTTTAATCTGCTGTCTTAATGGATTCAGCTTCAGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGGTACTTTCTGCGTTTTTATAAATGTGTTAAGTTGT-----TGAATGTCTCTGTTGTGAT chr4 + 94230402 49752074 49752073 49752393 49752074 49752073 49752393 320 TGGGCTTTACTGAAAAAGGACTAACCTGTATTTCTGAATCCCATCCTT-CCTACCTTCCACTGCTGCCTAACTCACATATTTCCTTTGGTTTGGTTTGGTTTTAGGAGCTGTTTAAAAGAGAAATGAGGT-TTTTGCATAGGCGTTTTCTTCAATTTTT--TCCCCTGTTCTGTCACTAACTTGTTTTTTCTATTCTGTCTTTAATCTGCTGTCTTTATGGACTCAGCTTCAGAAAAGGGAGCGCTCTTGCAGGGCCTATGTCCAGGTATTTCCTGTGTTTTTA-ATACACGTCCAGTTGTTTGACTGAATGACTGTGAAGTGGT .:..:.x.x......:::x::.::.:xx.....:.x..x..xx.x...-.:...x..:::.......:..:..:x...x..:-----------------..:.:::.:x.:x.x..x::x:....:....-.....::...::..x.....:x......--.x:::.x...............................x................x.....:...............:..............:...............:..:...:.......-.x.:::..:x......-----......x..x..xx...:. 48M1D33M17I31M1D28M2D123M1D16M5I19M 220/298 73.8% 320/94230402 0.0% 27/298 9.1% 12160435 NA +40299 chr4 + 190214555 61918807 61918806 61919486 680 TTTTTGCCCATTCTTTTCAACTTTTTTGTATTAATG--CACACTTTCTGTGAA-------CCAAAATTGCTATTGCACCTTTGACAAAGTGCAAATTGAATTATGCCAGTTTTACTTGCGTGCCTTTGGTGCATAAGACAAGAAGGATTCTAAGCTCCATTTATACTGCTAGGAAGAAATTAATGAGTATTTTCAAGTTCCTTGTTTGGTCACTTAATTGGCTATGTGACAAAGAGCTCTGTGGTGCATGTCAAACAACTTTCAGAGTCCTCTAATGATTTGTGCGTTGCTTGACTTGTGATACTATTCTGTGTGGCCTGTCAGGCTGGATGTCCTTGTTAAAGTGGCTAGAATAAATTGGCTAGCAGTGTGCATACAATGTAGTATATTAACTGCAGCAACAGGGAGTACTTTTAGCAGCTCTTTCAAGAGATTTCGATGTTTGCCCATAAGCATCAAAGCCAACCCAAACTTTCATTTAATATAATTAAAAGGACATCTGAAAGTAGTTTGAATCACAGCAGGTTCTTGTGGTTTGGTAACCCTTTGTTAAAACCCTGTGAACTTAATATATTTCACAGCTTGATAAATCTGCACTTGATTTATGTCAGTAAGAGAGAAAATATAAATCTGCACCCTGCATGTTTCTGGTGCCCTAAACCTATTGTTAAAAGACATTGAGATCAAAG chr4 + 94230402 49757994 49757993 49758675 49757994 49757993 49758675 682 TTTTTCCCACTTCTTGCTTGCTTGCTTGCCCAGCTGGCCTCAACTTCTGTGAAGACTAAACGAAAGAAGCTCTTGA------GACAGAGAATAAATTGAATTATGCCACATTTAGTTGTGTTCTTGTTGTGCCTGCAACAAGAAAGACTCTAACCTCCATTTATAAAGAAAGAGGCAAATTAATGAGGATTTTCAAGTTCCTTGTTTGGTCACTTAATTGGCTGTATGACAAAGAGCTCTGCGGTGCGTGTCAAACAACTTTCAGAGTCCTCTAATGATTTGTGCCTCGCTCGACTCCTGATGCTATTCTGCACAGCCTGTCAGGAGAGGTATCGTTGTTGAAGTGGCTGGAATAAATTGGCTAGCAGTGTGCATACAATGTAGTATATTAACTATAGCTATGGGGAGTACTTTTAGCAGCTTTTTCGAGGTATCTAGATGTTTGCCTATAAGCATCAAAG-TGCTCCGGACTTTCATTTAATGTAATTAAAAGGACATCTGAAAGAAGTGTGACTCACAGCAGGGTTCAGTGCTTGGGTAGCCCTTTGTTAAAACTCTGTGAACTTAATATACTTCACAGCTTGATAGACCTGCACTTGATTTATGTCAGTAAGAGCAAAAATATAAATCCCCACCCTGTGTGTTTCTGCTGCATTGAGCCTGTTGTTAGGGGAGAGGAGGTTCAAAG .....x..xx.....x::x:...x:...:x:x:x..--.x..x:.........-------.x...:xx...x...x------....:..x::................xx....x...:..x.:.x.x....x.:x:.......:..:.....x...........xx.xx..:::x...........x...................................:.:...............:.....:.....................................x.:...:....:x....:........::::..........xx:.:.:..x.....:........:............................................::...x.::...................:....:..:x..:.x..........:.............-::x:..::.............:......................x...x...x..........x.::x...x..x....:..............:................:..............:.:..........................x:............:x.......::........x...x:.:.:...:......:::..x.xx::.x...... 36M2I15M7I16M6D379M1D227M 544/673 80.8% 682/94230402 0.0% 16/673 2.4% 12160813 NA +15724 chr4 + 190214555 61934796 61934795 61936052 1257 TGGGTTCACTAGAGACCTCTGTCATTCTTTTCATCCTCTT-GTAGGCAATGGTCGAGACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCATGGAGAGACCTGACTACGAGTGATCAGCTGCGTGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAGTGCTTTTGTGCTGGCTGATAACCTTTTGAAGACTGACATTGTCAGGGAGAATACAGACAATATTAGTAAGTGGCCTTTGTTATTCAGAAGGTCCAGACACTCTT-GTATATCAGAAGAGGGAAAAGAAAAAAGTATCTCTGGTGTCCTAGATATGAGTGATGCTTTATTTCAATGGAGAAAAGTCATTCTTTTTCTAAAATAAAGAGGGCATCACTTGTCATTGGCTTAAAAGG-ATACAAGATCATGTGT----GCTATCTTTCTTAGGACATTTCAATATTAGGTTCAAAATTGAAAACATAGTAGCCTGAGATCACTTACAGTGAGGTTCGTTTTTTTAAAGGACTTTTATGTATGTA-TTACACTA--TTTAAAATTTCATCCTCTTAATACAGGAC---TGTTAGGAGTTATTTCAGTTATAATGAGAGTATCTTTGAATTCACATTATAAAGAAATAAGTCATTTGAGTGAAAATG-------------ATAAAACAGTGTTTGATAATCTTGTTATTTGGCTTATAAAGGATATCAGTCTATTTTTATTGTGGATTAGGAGTAGCTGACAGTTTTATTTCAGAAGTTAGGAAAAAGCTGTTTGAAATTTACTGGGCTTAAAGATAGTTTAATATTGATATGATAGTACAGCTCTAGATTATCAAAGGATTTTTATTTAATTTATAAAATAAAGATTATATTTTGAAACTTAAGACCAATGAC-AATGTATTAGAATTTGGGATTGAATTTAAATTTTAGGCTTTATTATTGACATGTTTG---TATTATTTACATAATTTTAGTAACTTTTTTGCATTATTTTGATAAAATACTAACAATAT---ATTTTCTT-----------------------------AAAGATTTTCATAA---------AGCATGACAAATAGAATAAGAATTCCAGTATTTTGA------------------TTTCAGAAATACTGCAATGGTTTAGGAAATTATTGTAGCTTAGGTATGTTTCTCAATGAGCACTGATATCTCTTTGATATTAACAGAATTGGAAGTTGCAAGACTGAGCACAGAAGGAAACTTAGAAGACCTAAAATTTCCAGAAAACATGGGCCATGGAAGCACTATCCAGCTGTCTGCAAATACCTTAAAGCAAAATGGCCGAAATGGTAGGTT chr4 + 94230402 49765846 49765845 49766994 49765846 49765845 49766994 1149 TAGGTTTGCTCAAGCCCTTTCTTACTCAGTTCCTCTCCTTTGCAGGCCATGGTGGAGACGGTGAACAACCTTCTTCAGCCACAGGCTCTGAATGCCTGGAGGGACCTGAACGCAAGTGAACAACAACGTGCAGCCACCAAATTGCTTGACACTGTGGAGGACAGTGCCTTCGTGCTGGCTGATAACCTGCTGAAGACTGACATTGTCCGTGAAAACACCGACAATATCCGTAAGAGAC-------------AGAGCCCGTACATACTTAGAGCACCAGAAGGAGAGTAAG----------------------GGTTATGAA----ACCTGACTTCAGT-----------------------------------CTTGGCTCTACATTAACTGAAGAGGAATGTTGG---ATGTGTCTTGGCCATTGGTCT--GGAAAACTTAGAAGTCTTTCCAAA----AGAGCCTAAGAGAATAAGATAGCTCCCTG----------TCCTTGAAATGCCATGGAAATGAGCACCTAAACTGCCTTTATTGCTCCTGGCTTTAAGTGCAAAATCTGTGTTAG-------------CACATTGAGAGCA---------CTGCTTCACAGGGAGATGGTTCATCGTAATGCAATTGTGTTTCATTTCATACAAATTCGTGTCT----------TTATTTGGCTGAT----------TGTTGATTTTAATTAAAAAACAAGCATGATGGAAAGCACCAGCACTCCCACTGTGCA-----TATGTAAAA-----------TGAGAACAACTTTCTTCTTCTATGAAAACAGATCCC----------AAGCACTGATAAC--ATTTACAGAA---------------AGTACCAATCGCCAGTGGCAAAAGAACTAGCATTT----TCAGATTTTCATTTTAACCGTTGTCCTTAATATCCTGAGGTTCTTGTTTACAAGAACTAGTTGTCTTTTGT------CTTCCACAGAGTACTGaatttatttgattttttttttaattaaatCTAAAACTTCTTCGGGGCAAAGATTTAAAAAGAAAGAGTCTAGTGTGAAACCTTGTAAGTGGATTCCTCTACTTTCAGATGGTCTTGTACACCATTTTTTAACTTTCAGGTATTGTGTAGGTGATTTTTTTCA-TTAGTGTTTTTTGTTACTG----TTGGTCTGTCTTGCA----AACAGAGCTGGAAGTTGCAAGACTAAGCACAGATGGCAATCTAGAAGATCTGAAGTTTCCCCAGAACACGGGCCATGGGAGCGCCATTCAACTTTCGGCAAATACCTTGAAACAAAATGGTCGAAATGGTAGGTT .:....::..x:..x...:.x.:.:..xx...x..::...-.:....x.....x.....:..x........:...........:...:.......x.....:.......x::.:.....x..:.x:.....:.......x:......x.:...........x.....:..:.................x:.................x.x..:..:..x........:x.....x.:.-------------.::.:..:x...:x...-.x::.:......::.::x...----------------------:.x.....:----:.:.x.:....:.-----------------------------------.x.x:..:xx....::..x..:...-..::x:.---......----..:..:xx...--...x.x:.:.:x.x.xxx.:....----.:.:.x..:x..xx.:....x:..:x.x.----------.::..x...x.x.x.xx.x:.:x.:.-:..x...:--....xx::.:.xxx..:.x.:.:..::.:---......-------------:.:.x......:.---------:::.x.:.:.::..:..::x....:xx.:..x..x..-------------.:...x:x....:.----------..........x..----------x..:x.....x...:x::.x:.:.x:.:::x..x..:x::.x:x.xxxx::.:x.x.-----.:.x.:...-----------.:.::.:.::..xx.x:.xx.....x.::.x.x.:.----------...x.:.xx..x:--.....:.:..---------------::x..:x.xx:...:..:.-..x.x.:...x....----.:::....xx......:x.x..:.:x..:.:..x:.x:---.x..:......x:.x:.x:x.:x.....x.------:..:x.:.:.:....:.xxx...---.....:..-----------------------------........xx.x.:---------..::...x.xx.x.x.x:x.:.....xx..:...x.------------------...:x:.xx.x.x.xx..x..x....x:...x..x.x:-....xxx.x...x.:.x..----:..:.x.x....xx.----......::................:........x..x..::.......:..:..:.....xx.:....:.........:...:.:..:..:..x..x...........:..:........:.............. 40M1I197M13D17M1I21M22D9M4D13M35D25M1I7M3D6M4I11M2D24M4D29M10D26M1I8M2I29M3I6M13D13M9D37M13I14M10D13M10D57M5D9M11D36M10D13M2D10M15D19M1I15M4D38M3I30M6D23M3I8M29I14M9I36M18I38M1D19M4D15M4D135M 693/1060 65.4% 1149/94230402 0.0% 286/1060 27.0% 12168950 NA +3218 chr4 + 190214555 61938826 61938825 61938898 73 AAACATGGGAGTTAGATGTTAAATAACCCTCCTCCTCAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTT chr4 + 94230402 3817459 3817458 3817531 3817459 3817458 3817531 73 AAAAACAAAAATTAGAAATAAAACACCCCCCCCCCCCAAAAAAAAAAGGAAAAAAAAAAGCATATAGTTCCTT ...x.::::.:.....x:.x...:.x...:..:..:...........::..........:x..x.xx..::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 58121367 NA +3105 chr4 + 190214555 61938847 61938846 61938902 56 AATAACCCTCCTCCTCAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTCCTA chr4 + 94230402 5936135 5936134 5936190 5936135 5936134 5936190 56 AATGACCCCCCTCCTCACAAAAAAAAAAAATCACCAAAAACACTTTTTTTTTTTTA ...:....:........x............xx.xx.....xx:.........::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 56002712 NA +20655 chr4 + 190214555 61946911 61946910 61948281 1371 TAGGAGAGATCAGAGTGGCCTTTGTCCTGTATAACAACTTGGGTCCTTATTTATCCACGGAGAATGCCAGTATGAAGTTGGGAACGGAAGCTTTGTCCACAAATCATTCTGTTATTGTCAATTCCCCTGTTATTACGGCAGCAATAAACAAAGAGTTCAGTAACAAGGTTTATTTGGCTGATCCTGTGGTATTTACTGTTAAACATATCAAGGTAAGAAAATGGCATATTAGCTTGGTTGTTCATATTATCTGTATTTTTATAACACTGAACATTAAGTGTATTAATTTTCTTTTAATGTTTTTTCTATTTGACA----TATAACAGTTCATT-ATCTGTACAATGTAGTGGTAATTTTTTTGTCAGAAATAAGATTTGGAGGAGGAGAATAATCCTTATATATGT--AAATACTTATGGTGAAAGCATTCATAGATGGATTTATAATTGCTTCTCCATAACTAAAAAGAGCTAGCTCAAGTGTAGAGAACTAAATTACAGCCTGAAAACCACAGATAATATTACAAAATTCTGCTGTATTTGGGATTCATGTGAAATGAATAGATTTTTAGCTGCTCTTGCTGCAAAAACAAGAAAACAATGGGTAACTATGTGAGACGATGGATATATTAACTCACTTCACTTTGGTAACCTTTCTACTGTCTACATGTATTTCATAACATTATGTTGCATACCTTAAATATTCACAATACTATCTGTGTTTTTAAAGAAGAATAGGAGTACATTAAACAGAACTAGAGATGGTTCTATATTTGATATTTCAAGCAATTATGTCCACGTGAAGATATATTTTTGCATATATACAAAGATTGAGGTTGTAAATTCAACAAAGATTTCTAAAGATCATCCTTTCAGATGTTGGTTGTTAAGAGCAATTAACCTCTTTATTTTGCAATGTGTATTAGAATTAGTGTGATTTTGAAACATTGGTACTAGTATATTATTTTAGTGTTAATTTAA--AAAAATAGTGCACT---CTTCTCTAGTCAAAGGGAACAAACAATAGCATATATTCAATTTCACTTAGAATTGTTGAGGCCCACTTA----TGAAACCATTGGTAGACATCTCTAAAAAATTGGAACAGAATATGAAGTTGTATTATATGT------------AAAGAAAATGCCAACCTAATTTACATGATCATAAAGTAGT-------TGTTGATTTTATGGATTT-----TTTTTCCCCTGTAGCAGTCAGAGGAAAATTTCAACCCTAACTGTTCATTTTGGAGCTACTCCAAGCGTACAATGACAGGTTATTGGTCAACACAAGGCTGTCGGCTCCTGACAACAAATAAGACACATACTACATGCTCTTGTAACCACCTAACAAATTTTGCAGTACTGATGGCACATGTGGAAGTTAAGGTAAG chr4 + 94230402 49769058 49769057 49770159 49769058 49769057 49770159 1102 TAGGTGAAATCAGGGTGGCCTTTGTGCTTTACAACAACTTGGGCACCTATCTCTCCACGGAGAATGCTAGCATGAAATTAGGAACCGAAGCGATGTCTACTAATCACTCCGTCATCGTCAACTCCCCTGTCATCACGGCAGCAATAAACAAAGAGTTCAGCAATAAGGTTTATCTAGCTGATCCCGTGGTCTTTACCGTCAAGCATATCAAGGTGAGCAAGT------------------TTGAAA--------ACCTTTAAAAAAAAAAAAA----------------------AATTCTGTTTCTATTACAAAGTACCACAAAAGTTTGCTGATCTGAGGCCCTCAGCAGTCCTT-----------GATTAGATTTTGAATTACACATTTGTTCCTCTGCGCTTTGAGTTGTTTATGGAGAATGTCTC----------TTTTGTATTGCATTAATAAAAGTAAAGAAAGTCTCCT------TTGAG--------------CTGATGCCCA-------------------TTGCTCAGTTGCTGACACACG------------------------TCATTCTGTAATTAAAAGCTAACAA--------TATATTAGA--ATGGG-------------------------------------------------CCATAATATTATTTTA--------------TCATGGTGGCA--GGGGATATTAGAGGAAAGTGGAATTGCGGTGAAAAAGGACAG-----------------------CTAGCACTCCTGT-----------------------------------------------------------TAGCCAAGCACAGTCATTGCTAAAGTTGATTGCTTAAAGCAATTAATTTCTCCGCTCTGCAATGCAAAT--GAAGCAATCTGGTTTTGAAGAGCTGAATTTAGTCTGT-------GTCTGAAATTAATCAAGAACAAAGAACTAAGTTTGTATTAGCAATGAGAGC-AGCAACAACCT------AACTTTCTCTGGTGTTGACAAGTAATACTTGACTTCGAAGTCATTGTTGATTGTTTATCTAAAATT---AAAGAGTAAG-AGTTACAAAGTGCCTCTGGGGaaaaaaaaaaaaaaaaaaaaaaaaGGTAATGTGTTTAGAAATCTCTGAAACCCTATCATTTTACTGCATTTACTCATTGCTTCCCTGCAGCAGTCAGAAGAAAATTTCAATCCAAACTGTTCATTCTGGAGCTACGCTAAGCGTACCATGACTGGGTATTGGTCCACCCAAGGATGTCGCCTCCTGACAACTAACAAGACGCACACCACATGCTCCTGCAATCACCTAACCAACTTTGCGGTCCTGATGGCACATGTAGAAGTTAAGGTAGG ....x..:.....:...........x..x..:...........:x.:...:.x..............:..:.....:..:.....x.....xx....:..x.....:..:..:..:.....:........:..:..........................:..:.........:.:........:.....x.....:..:..:...........:..x..:.------------------..x.x.--------.::....x..x.xx:..x.----------------------...x:.x........xx.x.----:.:..x....:::.-.....x:xxx:x:..::..xx..-----------:..x......x..:xx:x.x.x.x:.:.:.x.::::x.--.:x.::......x...x.:x.:----------...xxx.....x.:xx:.x..x....:.:..::xx..------.x...--------------....x:x...-------------------:....xx:..xxx..:x..:.------------------------..x.x...:..xx.x...xx.....--------...:.x...--....:-------------------------------------------------:.....:.....x..:--------------...:::.:x:.--x.x.x.x...:..:.:.:.:.:.x.:.:x.:..x.:::x:..-----------------------.x....x.:x...-----------------------------------------------------------.xx.:..:x.:x:..x..x.x:.x....:...:.x.:.........::...::::.:.......::x..--...x:.:.x..:.......:x::..:xx:....x.:.-------..x.x..x....--..:..:.:x.x...---:..x.x.x:x...x.:..:.-.:...:.:.x.------..:..:x::.:.x:...x::..xxx:....:----:...::.....x.::x::.:.x.xx......---.x...:..x.-....::.xx:.::x.------------...:....x:xx..xxx.:x.x.::..x.:.x...x:xx.-------.:.::x...xx..x....-----..x:.:.....:..........:...........:..x...........:.........x.:........x.....x..x........x..x.....x.....x...........x..:.....:..:..:........:..:..:........x..:.....:..x..............:............:. 222M18D6M8D19M22D20M4I14M1I23M11D38M2I22M10D37M6D5M14D10M19D21M24D25M8D9M2D5M49D16M14D11M2D42M23D13M59D69M2D37M7D12M2I14M3I20M1D11M6D31M4I31M3D10M1D15M12I40M7I18M5I196M 723/1062 68.1% 1102/94230402 0.0% 349/1062 32.9% 12177853 NA +3169 chr4 + 190214555 61952349 61952348 61952421 73 TACCCTTGTAGTCCCAGCTACTTGGGAGGTTGAGGTGGGAGGATTGCTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.x.x......:...........::...:....x:xx.x.:.x::.....:..::.:..x..x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -14080856 -80149546 +3049 chr4 + 190214555 61963600 61963599 61963650 51 TTTTATGGCTGCATAGTATTTTATAGTGTATATGTACCACATTTTTCTTTT chr4 + 94230402 42399659 42399658 42399709 42399659 42399658 42399709 51 TTTTATGTCTGCATACTATTTTATAGTGTTTAAATACTGCATTCCTATTTT .......x.......x.............x..x:...::....::.x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 19563941 NA +3407 chr4 + 190214555 61965622 61965621 61965693 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGTCAGGAGAATGGCGTGAACCCAGAAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........:.xx.x...xx:.x............x.xx:.x:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -14067584 -80162818 +15249 chr4 + 190214555 61979519 61979518 61979777 259 GTTATGCATAAGCGCAACTTATGGCTTTTTCATTGTGTT---TCCAGCACAGTGATGCGGTCCATGACCTCCTTCTGGATGTGATCACGTGGGTTGGAATTTTGCTGTCCCTTGTTTGTCTCCTGATTTGCATCTTCACATTTTGCTTTTTCCGGGGGCTCCAGAGTGACCGTAACACCATCCACAAGAACCTCTGCATCAGTCTCTTTGTAGCAGAGCTGCTCTTCCTGATTGGGATCAACCGAACTGACCAACCAGTAAG chr4 + 94230402 49781323 49781322 49781583 49781323 49781322 49781583 261 GTTATACAGTA-TGTGGCTGATGATCTTTTTGTTGTTTTATCTCCAGCACAGCGACGCAGTGCATGACCTGCTTCTGGACTTCATCACCTGGGTGGGCATCCTGCTGTCACTTGTCTGCCTCCTGATCTGCATCTTCACCTTCTGCTTCTTCCGTGGGCTACAGAGTGACCGCAACACAATTCACAAGAACTTGTGCATAAGCCTCTTCGTAGCAGAACTTCTCTTTCTCATTGGCATCAACCGGACTGACCAGCCGGTAAG .....:..xx.-:.:::..x...:::....::....x..---..........:..:..:..x........x........:x.x.....x.....x..x..::.......x.....:..:........:...........x..:.....:.....x.....x...........:.....x..:.........:.x.....x..:.....:........:..x.....:..x.....x........:........:..:..... 11M1D27M3I220M 206/258 79.8% 261/94230402 0.0% 4/258 1.6% 12198196 NA +17141 chr4 + 190214555 61983381 61983380 61983609 229 AGATTGCCTGTGCTGTTTTCGCTGCCCTGTTACATTTCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGGAGGGGGTGCAGCTTTATATCATGCTGGTGGAGGTTTTTGAGAGTGAACATTCACGTAGGAAATACTTTTATCTGGTCGGCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTACAGGAGTTATGGAACAGATAAAGTGTAAGT chr4 + 94230402 49782700 49782699 49782928 49782700 49782699 49782928 229 AGATTGCTTGTGCTGTCTTTGCTGCCCTCCTGCACTTCTTCTTCCTGGCGGCTTTCACCTGGATGTTCCTGGAAGGTGTGCAGCTCTACATCATGCTGGTGGAGGTTTTTGAGAGTGAACACTCGCGGAGGAAGTACTTCTATTTGGTTGGCTATGGCATGCCTGCACTGATTGTGGCCGTGTCAGCAGCAGTGGACTACCGGAGCTATGGCACAGACAAAGTGTGAGT .......:........:..:........x:.:..:.........:....x..:....................:..x........:..:................................:..:..x.....:.....:...:....:........x...........x........:........x.....:......x....:.....x.....:.......:... 229M 198/229 86.5% 229/94230402 0.0% 0/229 0.0% 12200681 NA +3402 chr4 + 190214555 61983385 61983384 61983492 108 TGCCTGTGCTGTTTTCGCTGCCCTGTTACATTTCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGGAGGGGGTGCAGCTTTATATCATGCTGGTGGAGGTTTTTGA chr4 + 94230402 4320432 4320431 4320539 4320432 4320431 4320539 108 TGTTTGCATCGCTGTGGCTGCGCTCCTGCACTATTTCCTGCTGGCAGCTTTCACCTGGATGTGCATGGAGTCTGTCCACCTCTACTTGGCTCTTGTCAAAGTTTTCAA ..::..::::.:.x.x.....x..x:.:..:.x:...:.x:....x..:.............x.x.....xxx..x..x..:..:x.x::x..x..x:.:.....::. 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 57662953 NA +3371 chr4 + 190214555 61990950 61990949 61991043 94 AACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGTATTTATGAATCAGTGTATATATGTATACAACGTGTATGTATGTATGTA chr4 + 94230402 79265515 79265514 79265608 79265515 79265514 79265608 94 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCA ...x.............::........xx...:.:.:::.::....:.x:.::x::x.:::...x.:...x:.....::x.x.:...:x...:. 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% -17274565 -76955837 +3328 chr4 + 190214555 61993246 61993245 61993300 55 ATTGTTTTTTTGTTTTTGTTTCTGTTTCTTTTTTTCTTTCTTTCCTTTTTTTTTT chr4 + 94230402 8296018 8296017 8296072 8296018 8296017 8296072 55 ATAGTTTCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT ..x....:........x::...x:...:::..............:...:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 53697228 NA +55238 chr4 + 190214555 61995501 61995500 61996557 1057 GCAAAATGGCAAATAATTCAAGATATTATTTTT---AACATCAAATGTAATTTGTTCAAAATTTACATTAATCTTTCTCATAACTAGTCACTTCCATTTTGTCTTCCTGTCATCCTGAA--------GAACGAAAATGTAATTTCCCAGAGGTTTTAAAAA--TTGGGGGAGTATTAAATGTAGCTGAAATTAAGTGATTAATAATTTACTTTTGGGTCATGAATCAACTTCATGGGATGCTAAGGATCATTTGCAACCCCAGAAGTATGAGCAGTAACAATGCACTTTTTAAGACTCCAGAAAT--------CTCAAAGGTTGGCTGCCCAACCTAATTAAACTTCAATCTTCTGATACCAAATTTAT--TTCTTCTTTGTACCACATTTCCTCAGATCTTCTTGACAGGAAAATGTCACTTTGCCTGACAGCTGATAGACAGGTTATGTAGCACCATAATCGGAGAGAAAAGGATAGCTTAAAGCTACTT--GATTTAATGGCTATGTGTATGGCTTTTTCTTTCTTTATCTTTTTTTTTTTAAAAGTTTCTATGACAGACACAAAAGGCCTTAGCAAATAGGCCCAGTGCCATATTTTCC-TGCTTCCTCCAGGGCTAATTATCTTACTCCATCAATAGTGCTGTCAGAAATTGGGCACATAATTCAGCATTTAAATGAACAAGCAATGTAATATTTCCTGTCTCCCAGTGGAATGCTTTGCAGCTCACATTCTTCTCTGTCACAGGTTCACTCTTGATGTATGTCCCATACCCAGTCCTTGAATACCTTCTCTCCCTTGTGTTTCATTGCAGATGTTGGCTCCGACTTGACACCTACTTCATTTGGAGTTTTATAGGACCAGCAACTTTGATAATTATGGTAAGAATTCCTAATTAACTA-TGTGTTTCCCAGATCAAGAAGTAAAACTTTCACTATCCCAGTACTGACTGTCTTTAATTTACAGAGGTTAATTTGGGGAAAGCATGTACTTATTTGACCCTACATAATTCAAGCAATTAAACACTCATTATAGTCTACT-TTTATGTTGTAAAATGGTTAATCAAAACAGGTGGGAGAAG chr4 + 94230402 49790031 49790030 49791112 49790031 49790030 49791112 1082 GCAGCGTTGCAAACACGACAAGATATTATTTTTTTAAACATCATGTGAAACTTTCTTAGAATTTATATTCATCTGTCTTGTAACCAGTCACTTCCATTTTATCTTCCTGTCGCCTGGAATGAACTAGGAATGGAAATATAATTTCCCAGGGGCCTGAAAAAAATGGGGGGAGTATTAAATGCAGTTGAAATTAAACGATTAATAATTTAGTTTTAGGCCATGAATCAACTTCATGGGATCACACGGACCATATGCAATGCTCAAAACATTAGTAGAAACAAAACACTCTGGAGGATCAGGGAAATAAAATACTCTAAAGGGGAAGTTGCTGAATCTAATTAAACCTCAGCCTTCTGTTATCAAAATCATGCTTCCTGTTTGCACCAAATTTGCTCTGATCAGCTTGATGAAAAAATGTCATCTCACTTGACAGTTGACAGACAGCTTGTGTTGCATCAGAGCTGGAGAGGAAAGCTGAGCTTAAAGCAAAAAAAGGCTCTGTAGCTACTCATCGGACCCCTTC---CTTAAAATAAAATGTTTTAAGGTGTTTTTCAATGGACACAGAAAGCCCGAGCAGACAGGCCTTGTGCCATTTTCCCCCTGCTTCCTCCAGAGGTAATTATCTTACTCCATCAATAGCACTGTCAGAAATCGGGCACATAATTCAGCATTTAAATGAACAAGCAATGTAATATTTCCTGTCTCCCACCGGTGTGTTTTGCAGCTCACATTTTTCTCTGTCACTCGCTCACTCTTGATGTATGTCCTGGGTGCAGTCCTTGAATGCCTTCTCTCCCCTGTGTTTCATTACAGATGTTGGCTCCGACTTGACACCTACTTCATTTGGAGCTTTATAGGACCAGCGACCTTGATAATTATGGTAAGAACTCCTAATTAACTACTCCATCTCTCAGGTCAAGAAATAAAACTTTTGCTGTCCCTTTACTCTGTATCTTTAATTTACACAGATTAGTTTGAGAAAGGCATGTTCTTCTGTGACCCCACCTGGCACAAGCAATTAGAGGCTCGTTACAGGAGGCTCTTTGCATGGTGAAATACTCGATCAAATCAGGGAGGGGAGG ...:x:.x.....:.xxx...............---.......x:..x..:..x:.:.:......:...x....x...::....:...............:..........::.:x...--------...:.:....:...........:..::.x.....--.x................:..:.........::.............x....:..:.....................xx:.x...:...x.....:x.:x:..::..x..:..x.....x:....:.xx.:..::xx:.....--------..x..:..xx:.:...:x..:..........:...::......x..:....x.:..--...:.x....:....x....x...x....xx.....::::.........::.::.:......:...:......x..:...x...:..x.:::......:....xxx..........x.xxx--.::.:x:.:....:x::.xx.:.:::...---...x.xx.xxxx.x......::xx..:.x::.::......:..:...:x....:.:.....:x.......x..::..-............:.x.......................::...........:.......................................................x:..x:..:...............:...........xx.:...................::x::x............:...........:...........:.......................................:..............:..:...................:.............-.x::.:..:...:.......:.........::..:....xx....xxx.:.............x..:...:....:.:..:......x...x.x......:..x.:::x..........:.x:...:...:..xxx:..-...:::.x..:....:x.::......x....x:..:..:. 33M3I83M8I34M2I142M8I56M2I121M2I29M3D77M1I300M1I139M1I40M 808/1054 76.7% 1082/94230402 0.0% 31/1054 2.9% 12205470 NA +14271 chr4 + 190214555 61997879 61997878 61998289 411 CACTAGACTTTGAATTGTTTCAAAATTTCCACAGCATCA---------CTCCAGCTGATGCTGA------TTTTATATTTGTGTGATTTGGCATAGCAGGCATAGT---AGTGCTTTGTAACTCAGTAGTATCCCAATTCTCGAAACTG---GCTTATTGCCTTTACTAAAACACTAGGCAGTCATCTACGATCCAATTCCTTTAAAAGTGTAGTGAGACCTAATTTCCCAGAACAACTCATGTGTTATAGAGAATAAATTTGCTTT--------------TTTGTTCCTACTCCAATTATGCTACATAACACTACCTTTTGCATTCC-------------AGCTTAATGTAATCTTCCTTGGGATTGCTTTATATAAAATGTTTCATCATACTGCTATACTGAAACCTGAATCAGGCTGTCTTGATAACATCAAGTAAGTGATTTTTATTTTTGTTTT chr4 + 94230402 49791997 49791996 49792437 49791997 49791996 49792437 441 CATTAGA----GAACTGTTTTTAATTTTCCATAACGTCATTTGAAGCTCTACAGTTGATGTTGGAACCAGCCCTATATCGGT------------AACATACACTGCTCCACAGCTTTGTAATGCTGTGGCATCCCTGCTCCACAGCCTGCAGGCTGGCTCACCTTA-TAAAACACTTGGCAATTTTCTGTTACTCAGTTTGTATAAAACTGTAGTGAGAGCTAATTTTCTAGAGCAACTCATCTGTTACAGAGACTGAGACTGTTACAGAGAAAAGTCCGATTTCTCCCTA-TCACATTCTGCCATGTCATGTTGCCTTTTTTTTTTCTCCTTCTTCTTGCAGCTTAATGTTATCTTCCTTGGGATTGCTCTCTATAAAATGTTTCATCATACTGCCATACTGAAACCTGAATCTGGATGTCTTGACAATATCAAGTAAGTGGTTGTGTTTTTTTTCTT ..:....----...:.....:x..x......:.:.:...---------..x...:.....:..:------:::.....:x..------------.:..x:..:x.:---.xx.........:x.x..:.:.....x::..:xx.:x...---...x::.xx.:...-.........x....:.:x...::x.::..:..:x.x.....x..........x.......:.:...:........x.....:.....x.:.:x:..:.x:--------------...x.:....-..xx...x...:.::.x.:::.:......x:x..:.-------------..........x..................:.x.......................:.................x..x........:..:............:..x.xx.....x.:.. 7M4D28M9I16M6I12M12D12M3I40M3I14M1D100M14I10M1D36M13I118M 290/393 73.8% 441/94230402 0.0% 66/393 16.8% 12205882 NA +3193 chr4 + 190214555 62005976 62005975 62006035 60 ACACACACACACACACACACACACACACATATATATATATATATATATATATATATATTT chr4 + 94230402 74526066 74526065 74526125 74526066 74526065 74526125 60 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ....xx.x.:x..............::x.:...:.:.x.......::.......:..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -12520090 -81710312 +3079 chr4 + 190214555 62005982 62005981 62006049 68 ACACACACACACACACACACACATATATATATATATATATATATATATATATTTTTTTTTTTTTTTGA chr4 + 94230402 18734805 18734804 18734872 18734805 18734804 18734872 68 ATAGACATGTACACACACACACATATGTATACATGTATTCATTTGAATCTGTGTTCTTTCCTTCTGGA .:.x...:::................:....:..:...x:..x.:x..x.:.x..:...::..:.x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 43271177 NA +3583 chr4 + 190214555 62007355 62007354 62007472 118 ATTATATATATATATATATATATATATATACACACACACACATATATATATACACGTATATATATATACACATATATATATATATACACACACATATATATACATATATGTGTGTGTA chr4 + 94230402 54005683 54005682 54005799 54005683 54005682 54005799 117 ATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGC-TTTATACATGTGCTAGTTTGTGTGTTTA ...:x.:.:....:...x........:...............x.x..x.:.x.xxx.::.:.x.x.xx:......:....x:...xx:.-:x:...:..:.:.xx:.x.......x.. 89M1D28M 77/117 65.8% 117/94230402 0.0% 1/117 0.9% 8001672 NA +3103 chr4 + 190214555 62007373 62007372 62007464 92 TATATATATATACACACACACACATATATATATACACGTATATATATATACACATATATATATATATACACACACATATATATACATATATG chr4 + 94230402 54963193 54963192 54963284 54963193 54963192 54963284 92 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATG .:.....x:.....x.::.....x......:.:....::.xx:.::.:::.x....:.:.:..x.....:x.xx:x.x.x.x......:... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 7044180 NA +3012 chr4 + 190214555 62024800 62024799 62024872 73 TGCGCCTGTATTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGTGTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....x.:.........::::........x.xx.x...x.::x.......:.:..x.xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -14008405 -80221997 +22875 chr4 + 190214555 62028779 62028778 62029686 908 ATATTTTTCATATGAAATTCTTTGTCATAAAATGCTAATGTTGGTGTTCTTGTCTTTATGTCTATGCATTCTTTAGCTATGAGGATAACAGACCCTTCATCAAGTAAGAATGACCTGAATGGCTGATAAATTCCGTTTATCAGTGTGGTCCCATGAACCAGCTGTCAGATCAGTACTGAAAAATCATTAGAGCTTCTGTCATTCACG-TAGAGGCAGAAGAGCAAACTGTGCAGGAAAATAATCTGGCATACAACCTATATGCAGAATAAATATGCTGCAGGTGTATTGCCAAAAAA-------AAATTCTGCTTCACCTCTGTTAATTGGATATCACCTGAATTCAGTGCCACA----GCAATAACAATTTCCTGTGGTACAGACTTGTTTCTCTTTTAATAGCTTCCCTTTCATTGTGATGTGTTCCTCTGTGCCACATACGTCCGCTTTTCTGTTGTTTGTTTGGGCATCATTCATCTAAAATTA--TTGTGTCATTTACTGGTATATCTTCAAAATGATCTT-----------ACGGGTATAAAACTACCCAATTGCAATTGATATTAATGAATTGCTATACTA---AATATAAATAAAGAAAAAAATG-CCTTCTTCAA----------AAT------TCATTTTTACATATGCAAAATTATCCCTTTCAAATTTGACACCTGTCACTTGATTAATGATCTAATCTG---TATGAATATATTTCAGTGTCTGAAATAAAGCTACAAGTCTGTACTAATCTAACAAATATGAAC-----ATAAATGTTAACATTTAGACATTTTTCGGAT--------GCATACTTTAAAATTACAAG-----------------------TCCTGCAA-----GAATAAACTAAGATTGGTAACCTA----------TGGGCAACCTTGCTATAGACTTTCAGTTTGTTCTTCTGGTGAAGAGTCCTTTGTTTTCATTT-----------TTCTCCAGTGCCATTTCACTTCTTCATGCTTCT chr4 + 94230402 49805650 49805649 49806582 49805650 49805649 49806582 933 ATATTCTCTATATGTCATTATATTTC---------TAATGTTGGTGTTCTTGTCTTTATGTCTATGCATTCTTTAGCTATGAGGATAACAGACCCTTCATCAAGTAAGAATGACCTGAATGGCTGATAAATTTCATTTATCAGTGTGGTCCCATGAACCAGCTGTCAGATCAATATTGAAAAATCATTAAAGCTTCTGTCATTCGCATTTGAGGCAGAAGAGCAAACTGTGCAGAAAAATGGCCAGGCATACAGCTAACATGCAGAGTAAATGTGCTGCATATGTATTGCCAACTGATTGCCACTATATTGGCTGTATATTCTTTGATTGGGCGTTACTTGAATTCAAGATAATATTCTGAAGTAATGGTGTT---TAATACAGACTTGTTATACCAACAGCAACCTTCC--------------GGTCCACTGTGCTCCA----------------------------GCA--------CTGAGAGTGCCTTGTGGTAAT-----GTAAATACGGAAGACAATTTTCAGAAAAGTGCATGAGTGGTAACCCACACGATTCCCATTCTGGTTGATGGG-TGCAATGCAAACTAATCTGTATTCAGCGGATAACGTCCTTCCACAGTGGAGTACCCAATTGTCTCTAATTTTCAATTATACCAAA-----------ACATTATATGTTTGTTTCTTTATTGTTA--CAAAATTGCACTATGGAAAAGAGGAATTGTGGAAAACCAA-CAGCAAGTCTGTACAAA---GAAAAACAAAAACCGCAAACAAGCCACACCAAAAAAAAACCCTGCAAAGCAAGCCAAAAATGCTCAGAAATTACATGCCTTAGGGCATCCGTGCTTTCTCTCCTGCAACCAAGGCAAAAGCAAAGCACAGTAACACAAAATAAAAGCTGACCAACTTTGCAGTAGACTTTCAGTTTGTTCTTCTGGTGAAGAGTCCTTTGTGTTCATTCCTGCAGCATCATTCCCATATTCTATTTCATTTCTTGATTCTTTT .....:.::.....xx...x.x.x..---------.................................................................................................:.:.....................................:..:.............:..............:.:-.x........................:.....:::.x........:.:x.:.......:.....:.......x:...........xx:.-------x.xx.:x...x:.:x.::x..:.....:::.:..:........:x::x.:.----.x.:...:::.x.:---.::............x:x.:xx:.::.:.:.:..--------------.x...x......:x..----------------------------...--------..:.:.x.:--.....x:.x.-----...x..x:xx..:.::..:..-----------.:.:..:xx..x.:..x.:...x.x...xxx:..:...::-...x..:.x.---...x.:x..xx..x::.x..:.-.....:x..:----------...------.x.....:.xx...:.x...-----------.x...xx.::::...:x...x...:x.:--.x..x:..---....:.x.x:xxxx.x...xx:...:x..-.x:...........x..---:.x...:.x:...-----.:..::xx:.x..xxx.:.x.:::.x.::.x--------:x..:..:x:........x.-----------------------........-----.x.x..:.x...xx::.....x:.----------..:x....:....x:.......................................x......:-----------...:.xx:.x.:......:.....x..x...:. 26M9D172M1I89M7I51M4I14M3D34M14D16M28D3M8D9M2I10M5D21M11I40M1D10M3I22M1I10M10I3M6I20M11D28M2D8M3I29M1D17M3D13M5I31M8I20M23I8M5I24M10I62M11I33M 595/823 72.3% 933/94230402 0.0% 195/823 23.7% 12223129 NA +18205 chr4 + 190214555 62031123 62031122 62031620 498 TTTCCTGTTGCCATTCACCATAATTACACCT----CATGCCATTTGCATATGTGCTGCAAATACAT-------------------------GAATAATTTATGGTACAAATCTGCTTTTGCTTAAATGAATTTCTGTGTTCATAACATTTTCATTCATGTATATATCTCCTCAAGCTTGAAAACTTGTAGTCT-CATTAAA----ACCTTAAAGTACTTACACCACCTGTC----TTACATTTTCTGTCAATAAAAGTTACTGTAACATTTTTTTCAGTGTCGTATTGTTGA--TCTGATATGGTTGTTA-ATTAAAGATCAATTATTTAATAACCCTTAATTTTCTCTT---------CTCTCTACAGGTCATGGGTTATAGGTGCAATAGCTCTTCTCTGCCTATTAGGATTGACCTGGGCCTTTGGACTCATGTATATTAATGAAAGCACAGTCATCATGGCCTATCTCTTCACCATTTTCAATTCTCTACAGGGAATGTTTATATTTATTTTCCATTGTGTCCTACAGAAGAAGGTAAGCTAGA chr4 + 94230402 49808627 49808626 49809166 49808627 49808626 49809166 540 TTTTTTCCTGCCATTTACAGAAACGGCATCTACATTGTGTCATATACATAAACACTGCTTTTACATTAAACAAATGGAAAAAAAAAAGTCAGAAACATTGCAGTTACAAAGATGCTTTGGTTATGATAAATTTCCATTCTCATAACATTTCCATTTCCGTATAT--TTGCTCAAGCTTGAAGACTTGTAAACTGCATCCAAGTGAAGACAAAAATCCCTACAGCTCATATTGATGTGCTATTTTCTTTTTGCAAAAACCATGGCCAAAGCTCTCCCTGT------TTGCAGACATGTGCCACGTTTTATAGATGAAAGACCAATCCCTTTCTTTCTTGTGTTTTTTTTTTTGTTTGTTTCTTCTAACAGGTCCTGGGTGATAGGTGCGATAGCCCTGCTTTGCCTATTAGGACTGACCTGGGCATTTGGACTCATGTATATTAATGAAAGCACAGTCATCATGGCGTATCTCTTCACCATATTCAATTCTCTGCAGGGAATGTTTATATTCATTTTCCATTGTGTCCTCCAGAAAAAGGTAAGACAGA ...::.x:.......:..x:x..:x:..:..----::..:...x.:....x:::....xxx.....-------------------------...xx...xxx.x......xx......x.:.xx:..:......::.x:...........:....:x:......--:.x............:.......:x..-...:x..----.xx:x...:.x.:....x.x.x.:.:----.xx:.......x.:x::....:::.:x.:x.x.x:.:.::.x..------...:x..--.x..x:.:.x..xx..-..x.....:....:x:..xx.xx.::x.:x....:.:..---------..:::x.......x.....x........:.....:..x..:............:..........x.........................................x..............x...........:.................:.................x.....:........x:... 31M4I31M25I73M2D27M1I7M4I26M4I44M6D7M2I16M1I39M9I189M 358/490 73.1% 540/94230402 0.0% 58/490 11.8% 12222496 NA +10794 chr4 + 190214555 62037692 62037691 62037872 181 GAATTACTTGCTAACAGAAGTTAATATTTAATTGGCTAGGTACGAAAAGAGTATGGGAAATGCCTGCGAACACATTGCTGTAGTGGCAAAAGTACAGAGAGTTCCATTGGTTCAGGGAAAACATCTGGTTCTCGAACTCCTGGACGCTACTCCACAGGCTCACAGGTAAACAATATTTGTT chr4 + 94230402 49811440 49811439 49811620 49811440 49811439 49811620 181 GAGCTGCCCACTAACCACCATTGCTGTTTCCTTGGCTAGGTACGTAAAGAGTACGGAAAATGCCTGCGCACACATTGCTGTAGTGGGAAAAGTACAGAGAGCTCCATTGGCTCAGGAAAAACCTCGGGGTCACGGACACCTGGAAGATATTCCACAGGCTCACAGGTAACCCATGCTTCTT ..::.:.:::.....x:xx:..:x.:...xx.............x........:..:...........x.................x..............:........:.....:.....x..x..x..x..:..x......x.x..:...................x.x..::..x.. 181M 143/181 79.0% 181/94230402 0.0% 0/181 0.0% 12226252 NA +15862 chr4 + 190214555 62044399 62044398 62044988 590 TGAAAATTCACTGCATCATG-AGTTCATTTTCTTTCTGCCTTTTCCCCCACCCAGAGCCGAATCCGTAGAATGTGGAATGACACGGTTCGAAAGCAGTCAGAGTCTTCCTTTATTACTGGAGACATAAACAGTTCAGCGTCACTCAACAGAGGTAATTAGAAA----------------------------TAATTTTTCATATTTATTACTTTTCTGATTACTTTAAGAAGTCCTTAAATTCATTG---CTTTATTTGCAACTT----------CTGAACCTGTTC-----CACATGATAGAAACATTGTAAGAACATAAAACTTG-GTTGAGTGTAGCAATGTGTTCCATTATTCATAAGCTACTTTAAAAAAATCCTGAATTTTCCAGAA--GTCTTTTCCAAAAGGAAATTAGAAA------ATAAAAAA-----------------------------------CTTTTTTTCCTAGTCATCTGCTGCTGCTATAAACTGGAGAGCTGTCAGGCCTCATTGGAAGCAGTGAAAATGGGCAATTATGTGGCTGTATAGTCGGC--TAAGCATCATAGAGTTCCACATTGTCTTAGATATAAAGCAATTTCATAGTCTTTGCGGAAGTAAAAGTATACTGTCTAATACATACTTAAGGCAACCTGTGTACTTGGAAAAAA chr4 + 94230402 49814078 49814077 49814725 49814078 49814077 49814725 648 TAAAAATTCATTACCTGCTGTGGTTCAATCCCTCTT----------------CAGAGCCGGATTCGTAGGATGTGGAACGACACAGTTCGAAAGCAGTCCGAGTCTTCCTTTATTACTGGAGATATAAACAGTTCAGCTTCACTCAACAGAGGTAATTATAAACTTTGGTTTTGTTTTGGTTTGGTTTGGTTTTTTTTTTGTATCTCTAACTCTTGTGATGGCTGTAACGAGT-CTTAAATATATTGCCCCTTTTTTCCTCACTTCAGATGGTGCCAGACCCTATTCGTTTACACA----AGAAATGTTAACTGGGAGGAGGTTTTGTGCTGGTTGTTTC-CTGTTTTCTTTTCTTCAT---TTAATTTTACA----CATGCATTTTCAAGGAATGTCATTTCTGGAAGGGAATTAGGAAAATGGGATAAAAAAGAGCAAAAACCCCATAGCCAAAAAGCCAAAACCTCCACGTCCCCCCAGCAA------ACTGCCATAAGCTGTTGTGGTGTCAGGCCTCATTGCTGATGGTGAAAACGGGCCGTTATGACAGTGTACTCTCTGCGTTAAGCATCACAGGCATTGTGATTGCTCTGGGTACATAGCAATTCTGCCGTCTTTGTGGAAGCAGAAATGAACAGCAGAGCACATACGTAAGAAAAGCTGTGTGCTTGGAACAAA .:........:.:.x.xx..-:.....x.::..:.:----------------........:..:.....:........:.....:..............x.......................:..............x....................x...----------------------------.xx.....::...:.x.x...:..x....x:..x...x:...-.......x:....---....x..:x:x....----------.x..x...:...-----....----.....::..:xxx.::x:x.::x:...-.:..:x...xx.-x...x...:x..x.....---:..x...x.x.----.x..x......x..:.--...x....:::....:......:..------........-----------------------------------.x:x.:::..:..:x.------:....:....:...xx.x.x...............xx::::.......:....x:.....xx:x....:xx..x..--.........:..:xx.:xxx....:::.:.:..:.x.......::::x.......:.....:.:..:.:x..x.:xx.::......x....:x..x......:.......x... 20M1I15M16D111M28I42M1D13M3I15M10I12M5I4M4D27M1I12M1D18M3D11M4D16M2I25M6I8M35I16M6D76M2I114M 400/555 72.1% 648/94230402 0.0% 128/555 23.1% 12230321 NA +4083 chr4 + 190214555 62051115 62051114 62051202 88 ATGTGTATATATATGTGTGTATATATATATACACA---------------------------AAGAACGTGTGTGTGTGTGTATATATATATATATATATATACATACATACACA chr4 + 94230402 68837027 68837026 68837141 68837027 68837026 68837141 115 ATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACA ...........:..:::.::...:x..:.:.....---------------------------...........:........:.:..:.:.:.x...:...:.:.:....:.... 35M27I53M 66/88 75.0% 115/94230402 0.0% 27/88 30.7% -6785912 -87444490 +3062 chr4 + 190214555 62051118 62051117 62051189 72 TGTATATATATGTGTGTATATATATATACACAAAGAACGTGTGTGTGTGTGTATATATATATATATATATAT chr4 + 94230402 80212510 80212509 80212581 80212510 80212509 80212581 72 TGTGCATATATGTGTTGATGTGTGCACACACTAAGCATGTGCATGTATGTGTAAATGTAGTGATGCAAATAT ...::..........xx..:.:.::.:....x...x.:...::...:......x..:..xxx..::.x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -18161392 -76069010 +3033 chr4 + 190214555 62051152 62051151 62051222 71 GAACGTGTGTGTGTGTGTATATATATATATATATATATACATACATACACAAAGGATATATATGTACATGT chr4 + 94230402 83316556 83316555 83316626 83316556 83316555 83316626 71 GAGTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAATCTGGACAGATATGT ..::.x:..x.x..:...:.:.:.....:.x...:..:...........:..:.:..x.:x.::x.:.... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -21265404 -72964998 +29384 chr4 + 190214555 62063208 62063207 62063839 632 TTAATTTTTAGCAAGCATGGGAATATATTCTTGCATACACCTTGGGAAA----GATAAAACCTTAAATGTAGCTTAATCAACATTGTAAATCATTTTCTTTCTTTCCCATTGACTCAGATATGTGCATTGTTGGAAATGTGTGCTCTA----AGTGGCATAT--TTTTTTAGTCTAGTTAGCTGCCTGCCTGTAATCAGGACTGTATCAATTGTTGTCATTCTAAATGTTTCCTTTC---TTTTTTTCAAACACATTTGCCTGATTGACCTTTTTTTTTTTTTCTCTGTCTTTCTATGGGGCTGCTCCAGGAGCCATGGCTAATCATCTTATAAGCAATGCTCTGCTTCGTCCGCATGGTACTAACAATCCCTATAATACATTGCTTGGGGAACCGGCGGTCTGTAACAACCCTTCTGTCAGCATGTACAACGCACAAGGTGTGCTGGAGTTTATCTTAATTTTTTCAAGTGAGAGTCCCATTTTATGTAGGTT-TTATGGGCAAATTCTATTTTTCTTTCTCCTGCCTTTCTT------------------------------TGTTTTGGAAGCAGACCTGCAGACTCCTTTCGCATTCCACCCCTCTTGGTGCTTTTATTTTCCACTTTCCTTAGGTTTTCCTTAGTAAAAAATGGA-TTCCTTCTGATAAACA chr4 + 94230402 49829364 49829363 49830027 49829364 49829363 49830027 664 TTTATTTGTAGCGAGCATGTGGGCATAGCCTTGCTTACACTCCGAGCGACTGGGGAACCACCATAAATGTAGCTTA-TCTGCTTTCTGATCCATTTTCTTTTG----CATCAGTTTGGATTTGTGCATTGTCAGTAACATCTGTGCTGCTTTAGTGGCATACAGTTCTCAAGTCTAATTAGCTGGCTGCTTGTAATCAGGACTAATTCAACTGTTGTCATTCTGAATGTTCTTTTTCCCTTTTTTTTATGCCACATTTGCCTGATTGACCTTTTTTGTTTTTTCTCTGTCTTCCTATCGGGCTGCTCCAGGAGCCATGGCTAATCATCTTATAACCAATGCTCTGCTTCGTCCTCATGGCACTAACAACCCTTATAATACATTGCTCGGGGAATCGGCGGTCTATAACAACCCTTCTGTCAGCATGTACAACGCACAAGGTGTGCTGGAGTTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGGGCACAAAAACGATCCTCCCTTT-----CATTTCAGTGCAT---TTTTCCATTTTCTGTAGGCTTTTTTCCATGAGCAATCAAGTTCACTTTGAGAGACA ..x....x....:......x.:::...x:.....x.....:::.:.x:.----.:x.xx...x.............-..x:.x..x.:.x:..........:x----...::::.::...x..........::.x..::.x..:x..:----.........:--..:.:x......:.......x....:.............:xx....:............:......:::....---.......xx:x.........................x...............:....x....................................x..................x.....:........:..:..............:......:.........:.................................................x...:x.x......x.......:.:.......x...:.x..-..x.x.x.x.x....x.:...:.....:..x:.:....:------------------------------.x.......:x::.:.x::x.:..xx:::..x.x..-----.x.:.::....x.---.......:....:x....:...::.:x:.:.:x...x:.-...x:.:...x.:... 49M4I23M1D26M4D41M4I10M2I73M3I254M1I39M30I36M5D13M3D39M1I16M 478/619 77.2% 664/94230402 0.0% 58/619 9.4% 12233844 NA +31299 chr4 + 190214555 62067968 62067967 62068980 1013 TTTTCTGACTAACATTTCAGTATTTTTAAT-TATGGTAAATCATGTAACCCAGACTCATGAATTTTGGGGCAGTGGAAATTATTTCCTTTGACTCTTTTTTCTGCATATCATCAATTTGCTTTTTACTCATGTTTCTTCTACTGTCGCTGTAAGCTTACTTGTTGTTTTTTCTTTCCTTTTCTTCATGCTGTCGTTTAGAGCCCTACAGAGAGACAAGTATGGGAGTAAAGCTAAACATTGCATATCAAATGTAATTTTTTTTAGTTCACTTTTATTGCATCACATATAGATGATGTAGTTATTAAAAACAGTTCATCTCACAATTTAAAAACTAA--------AAAGCCTATGAATCGACTTA----------------------------------TATAAATATATGT-------------------TAATAGAGATTAG---ACGCTTTTGTTGTCTG------ATTCTTTTATTGTCACATAATCAACATAGTTGTTAAGTTTCATGTAATGTTTGTGTGAGTTAAATTGTTTTTAAATTAAGCATTTATT-TTTGCTAAGTAATTCATAAACTTTTAATTTTTAT-TAGTACATTCCATCATAAA----AATGTG---TCACGTGCAACATATCCACTTTATTTTACTATGGCTGTTTTCAGCCCGTACCTA-ATGCATTGACAAACCGAAATAATAAACACGTGTTTCAATGCATCAGCCATCCAACCATAGCCATCAAGCATATCATAGCAGCTTCTGCAAAAGCTATCACCCATCACATACAGCCCT---TTAAGAAGCATTTACTT-TTATTTTTTCCTA-ACATTGTGG---ATTTGTCTACAAGA---TATAAAATGAAAATAAATCGCTTCACCCTATGTCTGTGATGGCTGCTTATTAATACAATTTATGCATTGCTAATTTTGAAAACTGTCTTACTTGAATACACAGTAT-----------------GCATCAGGAGTCCAAATAAAAATTGGCATATTTGAATCACGTAATTTAAACTAGTAATGAA------------------CTAGTTGAGTTTTGATAAATAATT---GCATCACAGATATAGAATGAATGCTATATTTTCACAAGTTA-----GCAATATATTAAG chr4 + 94230402 49832916 49832915 49833993 49832916 49832915 49833993 1078 TTTTCTGTCTAAAATGTCAATATTTTTAACCTGAAATAAACCATGTAAC--AAATTCATGTACTCTGGG-CAGTGAAAATTATTTCCGTTAACTCTCTTTTCTGCACATCATCAATTTGCTTTTTACTCATGTTTCTCCTACTGTCGCTGTAAGCTTACTTGTTGTTTTTTCTTTCCTTTTCTTCATGCTGTCGTTTAGAGCCCTACAGAGAGACAAGTATGGGAGTAAAGCTAAACATTGCATATCAAATGTAATTTTTTTTAGTTCACTTTTATTGCATCACATATAGATGATGTAGTTAATAAAGGAAATTCATCTCACAGTTTTGAAATCAAAAGAATCTAAAGCatatgaatatacatatgtatatatccgtgtatgcgtgtgtatgtgtgtgtatatatatatgtatgtgtgcatatatatatataGTTAAGATTAGATTATGCTTTCCTTGTTTATTTCCCATTTTTGTGATATCATTTACCCAAACTAGTT------TCTCATTTAGC-----TGTGCGTGTAATTCTTTTAAACTTCACC--TTATGATTTGCAAGGT----------CATGGCATTTTTATATGGCTCGTTTCATTACAGACCCCACTCTGTTTTCATGTGTGATGCCTTCA-TTTATTTCCCTCTGAACCCTCGCAGCCTCTGGCTCTATGCATTGGCAG--CGGAAGCATTGCTTGGTGCCTCAATGCATACGGCACTCAGC---------------TATCAGA-CAGATGCTGTCGTGTCCATCACCCATTGCATACGATCCTCCCCTAAAATGC--TCACTTCCCATTTCTTCCCAGACATCATGGCTCATTTG-----GAGAGCTTCCAACATGAAAATAAGTGGCTTTGCTCTATGTCTGTGATGGCTAGTTG-------ACTTTTCGCATAGCTCCCTT---------GTTTGTTTGGAAACCCAGGATATGGCATCACCTTCCAAGCTTCAGAAACCTAAAAGACAACAGACACACTTGGGCATTTCACTCAAAAGAAAGAATGAAAGCCTGCACTAGCACTTTCCAGCC--GTTGTCATGCACAACTACGACATCGCAGATATAGACCGAATCCTGTATTTTCAGAAGGTACACATGCCATGTACCAAG .......x....x..x...:.........:-.:x::....:........--.:.:.....x.:.:....-.....:...........x..:.....:.........:..............................:....................................................................................................................................................................x....::x.:...........:...x:...::..--------.....x.......xx..x..----------------------------------....x........-------------------..:.x:.......---.:.....:x....:.:------...:..x.:x.:...:x..x:...xx.....------.:....x..::-----....x..xx....x....x..x..x.x.--....x-.....x.:..----------.x.xxx........-.:.:x.:..:...:.:.:.----.x.x..---...:...::.:::x.:..-.......:x..x..:x:x:.:x.....:x.:x..x-........:..:--..:..xx..x:x:xx...::.........xx.x..::..:.---------------.....x.-...x.x...:x:x:x.:.........::.....:::...---:...:.x..--.:....-::....:....:.-....::...---.....-----:...---.x:..x..........:.x....::.:.................:x..:-------.x...x:....x...xx:..---------x:..::...:.x..x...x..-----------------..x....:.::.:...x:.x..:x.:..:.:...:::xx:x:.x.:x...xx.:x......------------------.:..::--...x.x..:x.:..:.---:....:..........x:....x..:........x...x..-----..x..:..::... 30M1I18M2D18M1D266M8I20M34I13M19I13M3I16M6I31M6D11M5D28M2D5M1I10M10D14M1I19M4I6M3I18M1D35M1I12M2D41M15D7M1D39M3I9M2D6M1I13M1I9M3I5M5D4M3I49M7D20M9D21M17I61M18I6M2D16M3I41M5I13M 716/943 75.9% 1078/94230402 0.0% 205/943 21.7% 12235052 NA +119722 chr4 + 190214555 62070043 62070042 62072733 2691 GTGTTTGTGTGTGTGTTCT------ATGGCTTGTTGGATATAAATGTCATAGTATCTTGT--AATCTTTTTCAGAGGGGCTTCTGAACAATGCCAGGGATACAAGTGTCATGGATACTCTACCACTGAATGGTAACCATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAAATCATAGACCGTGGCTATAACCATAACGAGACCGCCCTAGAGAAAAAGATTCTGAAGGAACTCACTTCCAACTATATCCCTTCTTACCTGAACAACCATGAGCGCTCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATGATGCCATTGTCCTGGATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAGACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGCTGCATACTTACTACCAGCTAGGTCGCGGCAGCAGTGATGGATTTATAGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCTATAGAAGATGACACAGAAAT--------TGGA-ACCAACAAAACTGC--TAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAGTGGTAATAATGTGTGTACTCCTAAATCTTTATGCTGTCCTCTAAAGACAAACACAAACTCTCAGACTTTTTTTTTTTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAGATAACTGCTAAAATTCCCCTGTACCCCATCCTTTCTTGTCCTTTC-CCCTTCAGATGGAGACTTCATTATGTTAATGAACAAGATATGA-AGAAAATGGCACTCATTGTGGCCTTGTTGAATTATGTTGTGTATGTTTTAAC-ATCTCTGATGCTGTGTTACTAAAATTAC-AAGGACCTGCTTT------------------------------TTAAAAGGCCAGAACAAT-TGTCTGAAATTAGTAACAATGCTGCATCTAGATTGGAGTGCTGCAC-AAACAAACATAAGAGCAAA---------GCAAAACTGTATCACATAG-GGTTTTTGGTCACTCACAACCTGAATTCACCACAGCTGGAATAGCTGTGGAAAACAAAATAAAACAACAAAATTAATAATGAAATGGAGGGGAATTCTAGAATTATATGCTAAATGCATATTTTATGATTTGCTGTATTAACTGATGAT-AAAACTAATGGCAGAAAAAGA-AGTTGAGCAATTTCTATGTAATGTACAGATACTAGCATTGCACATATAGTCTGCTTTCTGTTCCTCCAGAATTTGAGT-CCTGTTAATGTAGTAGAAAAAAAAAAAAGAAATTTTCTTTTTCTTTTGTGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTC------CTTCCTTTCTTCTCTTTCTTCATTTTCTTTTTTTCTTTTTTGCCTTTTATTCCTTTAAAA--TTTCGCCTGGCAAAAAATAAATAAATGGAACTATCACTTTATAAGAATCATTTTCTAGTAATGCAA--ACAAATTATTTTTTACAAAAAAACAAAATAAATAAAATTAGACTTCCTTCCCTCACTATATATCTTTATGCAGTCAGAATATTTCCAACAGTGTTTTTTGCAAATTAGAGCAGGACAAACTTTTATGTTTACAGGGCACGTCTG-TTGTAA---------TGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGATTCTAGAAGTCAAAAGGTGTCTATAGAACTAGTGGGGCTTCTGCATGTGAAAAACGGTTTTCCATAGGCATTAAAGTGCTGAAT-GCTCAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAG-AGGAAATTCACTCCCTCGTAAGCATTGGAAGGTCAAATTATTTTGAAGTGATTTTTTTAAAAAA-------AAGTCTTCTGTTTAT---------TAACAGGAAAATTTATTTATTTGACAGGATTTTGAGTAATGTAGGAATACAAAAGGTAAATTAGCAGCAC---ATATAATTTT--------------------------------------TTTTTAATTTATGATCCATTTTGTATGGTCTCAA-AGTTGGATGACCTCATTACTAATATTTGTTGTAAAAGTGAAACTTGTTTGCCAACCAATAAACAACTGATTGAGATTTAGAAGATATTGTATTGATGTATGTACTATATGATTAATCAGTCTTTTTATTTTTCTCGCCTTTCTTTCTTTCTGTTTTCAATACATAAACTTTGCTAATCCTCTGTGGCCCAAATGAGCCATGCAAAAGAAATCAATCTGCCTAGATGAATAAGCTAAGCACAAA-ATCATACAGGTTTGCAGACAAAGTAAACCAGAAAAATGGAATGGGCATGTTTATTTTGGATGAAATCAGATGCATAACTTAATGTTGAGCAGGTTAACATATATGTTACTATTTGCTTA-TCTATAAACCAG chr4 + 94230402 49835279 49835278 49838033 49835279 49835278 49838033 2755 GTGTGAGTGTGCACATCCCGCGTGAATGTCCTGTT---TGTACAAGTCACCCTCTCTTGTGTAATGTTTTTCAGAGGGGCTTCTGAACAATGCCAGGGATACAAGTGTCACGGATACTCTACCACTGAATGGTAATCACGGCAACAGCTACAGCATCGCCAGCGGCGAGTACCTCAGCAACTGCGTGCAAATCCTCGACCGCGGGTACAACCACACCGAGAATGCCCTCGAGAAAAAGATCCTGAAGGAACTCACCTCCAACTACATCCCCTCCTACCTGAACAACCATGAGCGCTCCAGCGAGCAGAGCCGCAACCTGATGAACAAACTCGTCAACAGCGTGGGCGGCGGGAGCGAGGACGACGCCATCGTGCTGGACGACGCCACCTCCTTCACCCACGAGGAGAGCCTGGGCCTGGAGCTCATCCACGAGGAGTCAGACGCCCCGCTGCTGCCCCCCCGTGTGTACTCGGCCGATGGCCCCCAGCCCCACCTCTACAGCCGGCGGCGCATCCCACAGGACAACAGCGAGAGCTTTTTCCCCTTGCTGACCAACGAGCACACGGATGACCTCCAGTCACCCAACAGGGATTCTCTGTACACCAGTATGCCCGCACTGGCTGGCATGCCCGTGGCGGAAAGCGTTGCCGCCAGCACCCAGACCGACCCCCCGCCGGCAAAAAGCGGCGACGCCGATGATGTTTACTACAAGAGCATGCCCAACCTCGGCTCCAGGAACCACGTCCATCAGCTACACACGTACTACCAGCTAGGCCGAGGCAGCAGCGACGGCTTTATAGTCCCGCCGAACAAAGAGGGAACCTCCCCGGACGGCAGTGCGAAAGGACCCGCTCATTTGGTCACTAGTCTATAGAAGGTTAAGCAAAAATGAAGCAAATGGACACCCACGGCCCCTCCGTAACGCTCGGTTTACTGTTCTGAGTTAATACAAGCAGTGGTAATATTGTGTGTACTCCTAAATCTTCATGCTGTTCT----AAGCGAAATGAAACTCTCAGAC-----TTTTTTTACTGGAATTTTTAGGCCAGCCC-GGAGAGAACAGGAACTGCTGCCCCCTCCCTCCCCCCAGTCCCTCCCCATCCTCCCTCCCTTCAGAC--AGACTTCATTATGTTAATGAAAGAGATAGAACAGATAACGGCACACTTCGTGGCCTTCTCAAGTTATGCTGTATTTGTTTAAACGATCCTTGATGCTGTGTTGCTCTTAATACTGAGGACCTGATTTaagaaagaaaaaaaaaaagcaaaggaaaaaaaaaaaGGCCAAAAATGTGCATTTGAAACTAGTAGCGATGACGCATCTAGGTGGGAGTGCTGCACAAAACAAACAAGCTAGCAAACTGTCTGTTACAAATCCGGATCGTGCAACGGGGTTTGGTCACTCACAACTCGGTTTGATCGCAGCGCCCTTCGCTGCGGGAG--CAACCAAAACA--AAAATTAATGAT---ATGAAAGGGAATCCTAGAATTATATGCTAAAGGCATATTTTATGTTTTGCTGTATTAACTGACGATCAAAACTAATGGCAGAAAAAGAGAACCGAACAATTTCTATGTAATGTACAGATACTAGCATTGCACATATAGTCTGCTTTCTGTTCCTCCAGAACTTGCGTCCCTGTTAATGTAGTGGAAAAAAAATAAGAA-------CTTTTCTGTTGTGCTGGTCTTGTAAGTTTGTCTACCAGTA--GGAGCAAGGTTTTTCATAACTCCTGTTTTTCTTTTCTTTCCTTTTGCCTCTCCCCTCCATCCCTCCCATCCTGGTAAAAAGTCTCACTGGGCAGAAAA---------GCGAACACCACTTTCTAAGGACCATTTT-TAGGAACGCGATGGCAGTTTCTTTCCAACCAAGGGA----------------GTCTTTTCTTTCCTCATCGTGTATCTTTCTCAAGCCGCCACATGGCCGGCAG-ACTTTTTGCAGAATAGAGCAGGGCAAAC-TTTATGTTTACAGTGCACAACCGATCGTAACAAGAATCCTGTGAAGCATCTTTGGCAAGCAGCCCCTCACCCAGGCCGTAGGTTCGCATCTAGAAGCCAAGAGGTTTTTGTAGTTGTAGCGGGGCTTCTGCATGAGACGGCGATTTCCCCATAGGAGCTAAGGGCCTTTATGGCCCCGTCCGGTCCCCGTTTAGGCACTTGTACTGCAGTGGTTAAGAAGAAAATTGATTGATGCGTAGTGATCTAAA----AAGTACTTTTGCAGTGATTTTTAAAGAAAAAAAAAATAAGTCTTCTGTTCATTATTTTGCCTAACAGG-AAATTTATTTATTTGACACGATTTTAAGTAACATAGGCTTTCCAGAGGTAAATTAGCAGCACGGAGTATAAtttcttctttttttttctttttcaatttttttttcctttttatttttAATTTATGAT-CATTTTGTATGGTCTCAGCAGTTGAATGACCTCATTACTAATATTTGTTGTAAAAGTGAAGCTTGTTTGCCAACCAATAAACAACTGATCACAATTTAGAAGACACTGT----ATGTATGTACTGTACAATTAATCGCTCTTCTCTGTTGTT---CCTTTCTCCATTGCTGTCTTCAGTAT---GAGTTTCCAACTCCTTTAGGGTATGGGTGAGCAGTGCCAAAGAGAGGAG---GCCTGGCTGAGCAATTTAAGCACAAATGTTACCCAG--CTACAG-CTGAGTAGA--AGTGTCAGGCTATCAGCACTTGT-TTCTGGATGAGAACAAA-GCTGAACCACATTTCTTGCAGGTTATCCTAGGT-CTGTTTTGTGCCTACTGTGTAAACCAG ....xx.....::::.:.:------...x.:....---.:..x.x....:xx.x......--...x............................................:........................:..:.....:..:........:...........:.....x........:.........x.x.....:..x..:.....:.x.....x:.....x...........:..............:........:.....:..:..........................:..:....:.x.x..:...........:..x..x..:.:.x.x...:.:..:..x..:..:..:.....:..x.....:..:........x..:.x............::..........:.....:..:.....:..x..:..:..x:..........xx.x..:.....x:....x::..x......x....x:..:.x.x.:x....x.....x..:...x....:..............:.....:..............:..x..:............x.:..:..:.....x..:.....:.....x:..........::..x...:x:.:..:..:...:..:................x.....:.....x...x.:..:..:.....x..............:........x.....x........:.................:..:..x..............:..x........:..:..x........:..x..:........x..:...:.:..x..x..x...x.:........x...........................:.x.x:..:....--------....-...x..::xx.:x.--....:.::x...x.............:...:..............x....................:.......:..----.::.:..xxx............-----........x...:.........:......-..:.....x::x.......:xxx:::....x:x...x:...:.:.:::....::.-.........:--.....................x:.....x:.-...x..:.....x.x.:........x.::.:.....:...:.x.....x...-...::............:..xxx.x...-:........x...------------------------------xx.........:..xx:.-::.:.....:.....:.:...x:........:.x............-.........x:xx......---------:....x.:.x...::::.:-..xx................::.:x..x.:.:....xxxxx.x....:..:.:--x..x:......--.........:..---...:.:......:..................x............x.................:...-.....................-.:::..:................................................................:...x..-..............:.........x..::.-------:......x..............:.................--:......:....:------..:.:x..:....:..::...x....x::.:.::.:.::x.x...:::..:.:xx.....--.:..:.:x....:....---------.x:.x:.:......x....:.:......-...x..:..:.--:..:x..x...::x..x..:::.----------------:xx:..:...:.....:::.:.......x.xx..:.:xx.:..xx..::...-::........:.x.........:.....-.............x....:x.:.-.:....---------..::......x............::.x.....x:.:.xx...x.x:.xx........:...:....x.:.:...xxx...:..............x..x::xx:x..::.......x::...:.xx..xx..-..:.x...:.:..xx.:xx.:.....:..:...:.x::xx..x..-..:.....x.:.xx:x....:xx..:x:..----..:.xx.....x..........xx.:....-------............:..---------.......-..................x......:.....::....xx.x.x.:.................---:........:--------------------------------------...............-.................:-.....:...................................:............................::x:..........:.:...----...........:..::.......:x....:.:xx..x.:---.......::x..x....:....:..:---:.x...x.x.x....:.:x..:x::::.....x:...x.....:.xx.:---....:.x...::..x:..........-:.:.:x...--:.:...-.x:....:.--..x:xx.x.xx..x:...:x.x.-..:.......:.x..:.-..xx...:xx..x.:xx........x.x..x:.-:.::.x.x...:..-.x.:........ 19M6I10M3D22M2I828M8I4M1I14M2I77M4D22M5D29M1D55M1I10M2D31M1I52M1I28M1I13M30I18M1I46M1I19M9I19M1I53M2D11M2D12M3D66M1I21M1I78M1I30M7D40M2D13M6I60M2I17M9D28M1D11M2I23M16D52M1D28M1D23M1I6M9I132M1I45M1I30M4D30M7I15M9I7M1D62M3I10M38I15M1D18M1I90M4D39M3D26M3D49M3D26M1I9M2D6M1D9M2D23M1D17M1D33M1D14M1I12M 2010/2605 77.2% 2755/94230402 0.0% 236/2605 9.1% 12234764 NA +3603 chr4 + 190214555 62080935 62080934 62080989 55 ATACACACACACACACACACATACATATGTGTGTATGTATATATGTGTATATATG chr4 + 94230402 44243255 44243254 44243309 44243255 44243254 44243309 55 atatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATG ...:.:.:.....x.......:...:.:......:...:.:.x............ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 17837680 NA +3157 chr4 + 190214555 62086356 62086355 62086418 63 ATCTTATCACACAACACACACACACACACACACACACACACACACACAAACACAAACACACTA chr4 + 94230402 87502940 87502939 87502999 87502940 87502939 87502999 60 ACCTTATTGCACAGTAAGCATACAAATATACACACACACACACACACTAAC---AGTACACTA .:.....::....::.x:..:...x.:.:..................x...---.::...... 51M3D9M 46/60 76.7% 60/94230402 0.0% 3/60 5.0% -25416584 -68813818 +3122 chr4 + 190214555 62106588 62106587 62106651 64 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGCAGAAGCTCTTTAGTTT chr4 + 94230402 36020528 36020527 36020591 36020528 36020527 36020591 64 TTTTTTTCTGCTATTTTTCCTCTGTTTTTTTTTTTTTTTAAGCTGTGCAGAGGAACCTGGATTT .......:.x:.x.....::.:.x...............xx..........:.xx.:.x::... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 26086060 NA +4174 chr4 + 190214555 62135620 62135619 62135832 213 GATGAAGTCTTTACCATCTCAAATTCCTGTTATAATTAGTTTCAGAAGAACAGATCCTTGTTATGTCTATTTCTATTCTTTTCCTCATCTGTGACAGGGGAATGAGTCATTAGAATTTTAATGTC------------TGCATTAAATGCCAGCAGTGGTCTGTTGTTATGCTTTAACTACTTCAATATTCTGAATTCTGAATGGCTAATCCATTCTACCTTTTAT chr4 + 94230402 17234674 17234673 17234897 17234674 17234673 17234897 224 GGCAAAGTTTGCACCATTTTCCATGCTTGTTAGAAACACTGTCCCTGGAAGGGATTCATGTTCTGCCATTTTACATTCTCTCTACAGTGTTTGTCATATGAATGAGTTATTAGACTGTGAATGCCTCATATATTCTGTAAATTACAGGGTAGAAGCATTCAGCAGTACTATTTTGACCTTTTCAGCATTCTGCGATTTG-CTGGGCATGCCATTCCACATCTCAT .:::....:.x:.....:.:xx..x.:.....x..x:.x.x..xxx:...x:...:.x....x..:.xx...x:.....:.::x:x:.x.x..x..x:x........:......x.x.x....:.------------.:x....x.x.x:..x..::x..x.:x..xx.::...:..:x:....::......x:x.:..-x...x:.xx......:..x.:.:.. 125M12I62M1D25M 127/212 59.9% 224/94230402 0.0% 13/212 6.1% 44900946 NA +3144 chr4 + 190214555 62141987 62141986 62142070 84 ATATACATATATACATATATAAATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGT chr4 + 94230402 89812971 89812970 89813054 89812971 89812970 89813054 84 ATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGT ...x.:.x....:::.....xx.x..::x..x...:..:.:..x.:x:x::..:..:...x:x...........:......... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -27670984 -66559418 +3042 chr4 + 190214555 62141989 62141988 62142071 83 ATACATATATACATATATAAATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTA chr4 + 94230402 89812975 89812974 89813057 89812975 89812974 89813057 83 ATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA ...x....:.::....x.....::x.xxx..:..:.::.x.:x:x::..:..:...x:x...................:.x.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -27670986 -66559416 +3108 chr4 + 190214555 62142007 62142006 62142055 49 AAATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857608 6857607 6857656 6857608 6857607 6857656 49 AAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .........:x..:...::..:.x..........x...........x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 55284399 NA +3087 chr4 + 190214555 62142008 62142007 62142082 75 AATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATTTTTTTTTTT chr4 + 94230402 6857605 6857604 6857679 6857605 6857604 6857679 75 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCT ..x.x....x..::..:....:...:x:.........x...........x..x.x...xx.x.x..:.:..x.:. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 55284403 NA +3312 chr4 + 190214555 62142018 62142017 62142082 65 TATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATTTTTTTTTTT chr4 + 94230402 6857611 6857610 6857675 6857611 6857610 6857675 65 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTT ......::......:..:.:x:.........x...........x.:x.x..:xx......:.:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 55284407 NA +3020 chr4 + 190214555 62142019 62142018 62142083 65 ATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATTTTTTTTTTTT chr4 + 94230402 6857610 6857609 6857674 6857610 6857609 6857674 65 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCT .......:::.:..::..:.:x:.........x.........:.x.:x.x:..x.......:.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 55284409 NA +4268 chr4 + 190214555 62170279 62170278 62170448 170 GATTGAATTAACACACACAGAAACCACAAACACTTTTTTCAAAAACTCATTTTAGTTTATCTTCCCTGAACAAACTGAGCAATATTTAGTGAAGC--TCTGTCTTAGTCCCTGTGACCACTTTTAAATTACAGGATGGTCAGAGGAGGATTGGTGAGCACCTGGAAGATTGA chr4 + 94230402 49852982 49852981 49853137 49852982 49852981 49853137 156 GGTTCAATTTCCACACATAACAACCCCAACTG--TTGATCCAGAAGTAGTTTTAGTTTATCCACTCTGAACTAAATAAGCACCATTTAGTGAAGCTTTCTGCCTAAAAT------ACCAC--TAAAATGATGGGACTGTCAGAAGAGTA--GGAGAG----TAGAAGGCTGA .:..x....xx......:.:x....x...x::--..xx..x.:..x.x:............:x.:......x..x.:....x:............--....:..x.:x:------.....--.x....x.::...:x......:...x.--..x...----.:....::... 32M2D61M2I12M6D5M2D27M2D6M4D11M 111/154 72.1% 156/94230402 0.0% 18/154 11.7% 12317297 NA +11580 chr4 + 190214555 62199742 62199741 62200883 1142 TTGGCATTTAAACAAAAATGGCAATTTTAATTTTATCT------------TCATCCAAATTAGAAAGGCAAAAAAAAAAAATCAAAAAAGAAAAACCTCGTTTTTTCAAACGAAAAGTGAGTTTTTAAAACCTTTGGTTT------------------GCAGGAATTAAAAAAAATAAT-TAAAACAAAACTTGTCGATGTCATTTTAAAGTGGTTGGTTAATAAGCTTTGGCTCATGATTTCAATTTGAAATTTCCCTAG--ACTACCCTGTTTATGATAGAAGCTGAATTTTACAGTGGCATTTTATGTGCCTGGGCTACATTTTTAAGCCCAGTCCTGTTGTTTAGGGCCAGAAATGGACACAATTTAATTCTGTTTATTATAGAAATCAAGTGCTTTTGGAAAGAGATTGTGAGCAGCTGCTTAGTATTGTCTTTGTGTTAATATAGAGGTTCATTTCTCATGCCTTTTGAGGAAAAAGCAGTTCATGAGATTTCTAGAGGCTCTTTTCTACAGAAA--------------------TATAGGTTGGCTGCCAGGA-TTTAGCAGCAAAAGAGA--TTTGCTGTTAATTGGTGGGGCTGGATGTCTCTGACAGGTGTCAAATTAAGACATGTACTCCAGTAGAATTTCT-AGGGTTGTGCAAAGAAGACATCAGTAATCAAAATAG----AAAAATAAAACTTTTTTTTGTTAT--ACAATT-TCCCAGCGAGT-------TTTTAATCTCATGTAGCTGAATTCAA----TATGAAGAAAGTTTTTGGAATGAGGATGACAAGGATTATTTCCACTTTCCTTAGAAGACTGTGTTCATCGATGGTTAACAAAATTAATTTTTTATTTAAAAAACAATCTAGTTAAGATAATTGAGCAAATTTTAAGGTGAGATGATGGTTTTAATAATTGCATTTACAATGGTAAGTAACTGAAATTCACAGTCT---CTTGAAGCAGGCCCTTGCATATAGCATTTGATTCTTTC---TACAATGATATAAAGAACCTATTAAATTTGGTGGAAAATAGCAATGGCATTTAGTTCTTAA----GCTATTTTTTTATGTTTGGTAACGATATGAATAAAAAC-------CAAGGATGAGACATTCTTATACTCTCATAATGGCTGGCTCTGTTTCTCCATCCACTATCTTAAATCTTAGGGTCCCTTTTTCTTAGTGCTAAG--AAAGTGACAGCCAACTG chr4 + 94230402 49857800 49857799 49858957 49857800 49857799 49858957 1158 TTGTCCTTCCAGCCAAATTAGCCCTTTTCATTGCATTTCTCAAAAGAGCATTTTCCAAATTTaaaa----aaaaaaaaaaagaaaaagaataaaa------------GGGTGGGTAGAGAACTCTTTACCTACCAGGTTCCTTGGGAGAGTGATTCCAGCATGAAATGAAAAATAAACTCTAAAGTATAATTTGCCAGAGCCCTGTCCA---GTTTGCTCATTTGGCCCTCACTAAATACTTCAAGGCAAAATACCTCCAGCTGCTCCTTTGCCATTGAAAAAACTTGAACTTCAAACCCAATCTCTGTACACCCTGTCT-CTGCTGAGAGCCCAGCTCCATTCTGTGGGATTAAATCTAGACATTATTAAATTCTTCTGATCAGTGACAG-AAGTGCCTTTAGGAAGAG-TGCTGAGCAGCTGCTTAATATTGTTTTTGTGGTGATAGGGAGGCAAATGCCTTTTGCATTGGCTGGGGAAAACAGTTTGTGTCATTCCTAGAGGCACTTTATTGTGGAAACACAGCTCAGAGTCATTCTTTATGGGCCAGTTGCCAAAACTTCAGCAGAAGCAGAGAAGCTTGCAAATAATTAGCTGGAC----TGTCTCTAGCAGGTGTCACTTTGGAATTCATAGTTGATGATAATCCTTGAAGATTGCAGAGAGGGGATCTGACCGGACAAAGCAAGTCCAATATTCACATATTTTTTTGTGAGCAACAATTCTCCTCGCTAATGCACTGGCTCTGATGGGAAGCAGCTTGACCAAAAATCTGTGATTTGAACTACTGGATAAAGAGTGA-----ATAAATTGCACTTTCT------AAGTGGG------GGTGGGGGGGGAATTCCACGCTATCCCCAAAAAGAAATC----------AATACAATGTCTTTAACTGGGAAAGGATGCTGCT------------------------TAATTGGAATACAGGTCCTGCATTAAACTCTGATTCTAGCATGAGGTATTTAATATTTTTCAGCACAATAAAAGAAGAGAATTAATGGACTCAGCGGGAAATCTAGATGGCATTTAGCTCTGAATCAGACTATTATTTTACACTTGGCACTGATAGAAGTCAAAATGAGGCCACAAGCCCAAGACTTTCTCATCTCCTTGCAAGTGCCAATTCCCTTTATATTCCCATGATCCCTGCTTGGAGGGTTCCATTCTC-CAGCACTCAGTCACAGCAGCAACAAACTG ...x.x..:x.:.x...x.:..xx....x...x:..:.------------.:x........x:...----...........xx....:.:x....------------::::.::x..x..::.:..x.xx:x::x....:------------------...x...x.:.....x.x.x.-....::.x..:...:.::x.:.x.x.:x.---.x...x.:.x.x:..::.x:..x.xx.:.....xx::....x:.:.:..--:..x.::..::xx...x.:..x:....:..:.x.x:x:xx:.:.:.:::..:x.x..-.xx:.xx:.......::.::..x.x.:..:::.:.xx.:....:x...x......x:.x..:.xx..x.x-......:...:.:.....-.xx..............:......:......x.:...x:....:xx..x:..:x...x..xxxx..::...:.....::..xx...:........x....x:.:::....--------------------...:..:::.:.....::.-..:.....x.:x.....--:....x:x.....:.:x..:.----.......::.........xx..:::.:x::..x.:x.xx.x...:::.-.:.:...::x.:..::..:x.x.x:::x....::.:----..x.x.x.x.:x.........x.x--......-...:x..x.:.-------:.:.:..xxx.x.:....x:.::x..----.:...xxx:.::.x:....xx:..::...-----..x.x..x.......:------:.x..x.------.:...xx::x:..x.:x.:x:.x.x:::.....:x....----------...xx.:::xx...x.xx.x..:.x....x.x:.------------------------...:..:...x..x:x:..---:.x:.xx.x.:::..x....:x:.:....:..x:...:---:.....:.x.x..:::.x:..x.::.:.::.:..:....xxx:...........:...x..----:.....x.....:::....:.x:....x:.:.x....:-------....xx::....x....:..x::..:::..xx..::::..:x...x.x:x:...:x...::x:x.:xx.....:..x..:..-:..::..x..--.x..:::..:.x..... 38M12I16M4D25M12D33M18I21M1I29M3D49M2I57M1D70M1D18M1D110M20I19M1I17M2I21M4D48M1I36M4I24M2I6M1I11M7I26M4I29M5D16M6D7M6D39M10D34M24D19M3I38M3I61M4I38M7I82M1D10M2I17M 633/1064 59.5% 1158/94230402 0.0% 172/1064 16.2% 12341942 NA +3396 chr4 + 190214555 62205766 62205765 62205845 80 AGTGGCATGCACCTATAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTGAGCCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.....x.:..:.:...........::........x.x::x...x.......:..::.:..x:xx:..:..:.. 5M2D73M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% -13827434 -80402968 +15132 chr4 + 190214555 62210488 62210487 62211026 539 TTTGATAATCAGAGATGATTTTGTTTGTTTTTCATAAAAGATTTCTAGTGTCAGTAATCCTATAAATATATGGTCCTAATTTAAAA-TAATTATTCTGAAGTAAAAATAAGCAATTCTGTC--ACTGTGGGGCTTTAA------------AGGAAAGGGCAGTGTTCCAAACCAATTATAAACAAATTGACCCTCTTAAGATTTTCCTTCTTACTCAACCAATGAGTAAAAACTGATTCTTTGCCAATAAGCCTCATGATTTTTTGTGGCTAGGAAAAGCATGCTTCTTAATGAACCATTATCCCTCAGCCTTCATGATCCAGATGAGTAAATGCAACCCTATGCCTCATGAAGAATGATTGATTTAGTTACA-TGGGCATAATTGTTTCATTAAGAAGAATCAGTTCATTAAAGCTTAGGGAAATGAGTAAGTTATAG-GTGAGACTG---GCTAGACTTACCTTGACATA--AAGACAATCAAGTCAGGAGAAATCAACTGGCATT---TATTTAATACTCTATGATGTGTGAAAACTATTCCAAGAAATTTAGTTGCTTTC chr4 + 94230402 49860281 49860280 49860811 49860281 49860280 49860811 531 TTTGATAATCTCAGAC-----------TTGTCAGTAACGGATATCGGATGCTGGCAACCCACAAATTGTGCAGGCCTGCTTTAAAAATAATTGTGCTGAAGAAAAGATAAGCTATTGTTTCCAGCTATAGGGTTTTAATAAAGCTGGTGTATGAGAGGGCAGTGATCCAAGTCAATTATAACCTAATTGACCCTTTTAAG-TATTCCTACTTATCTGAC-----------AGCTCATTCTTTGCCAGTAGGGCTGGTGATATCT-GTGGA-ATGGAAAGTGTAGTTTTCAATAACCCGTTATCTA-CAGTATTCCTGATCCAGACAAATAAATGCAGGCAACCACCTCTAGAAGGATGGTTGATTTAGTTACAGTGGTCATAATTGGTCAATTAGGGAGACTCGAGCTGCTAAAGC-CAGCAAAGTGAGCAAGAGACAGAGGGAGGCCAAGCACAGGATTTACCTTGACAGAGGAAGCTATTTAAATGAAGGGAATCCA----GCATTGCCTATTTAATACTCCATGGAGTATGAAAAGGCTTTCCAAAAA--TAATTACTCTC ..........xx...:-----------..x.:x:...x:...x..x::..:::.:..:..xxx..x.:.:::.x...:x.......-.....:.x......x...:......x...x.x..--:..:.:...:.....------------.x..:.........x.....::.........x.x..........:.....-.x.....x....::::..-----------.:..x...........:..:.x..x:....x.:.-....x-.x.:....::.:x..:.:...:.x..:.....:x-...:x...x.........::.:........:x.xxx::....xx....:...:..............-...x........x.:x....:.:...x..::x::::......-:..x:..:....:...xx.:..-.x...:.::---:.x:..:...........x.--...x:.x.:..:.x.:.:...x:..----.....---............:...:x..:......xxx..:.x.:...--..:..:..:.. 16M11D59M1I34M2I15M12I50M1D18M11D34M1D5M1D34M1D67M1I42M1D22M1I9M3I20M2I25M4D5M3I40M2D11M 358/506 70.8% 531/94230402 0.0% 58/506 11.5% 12350207 NA +3106 chr4 + 190214555 62216889 62216888 62216931 43 TTTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTTGAGACAGA chr4 + 94230402 89615118 89615117 89615160 89615118 89615117 89615160 43 TTTGTTTGTTTGTTTGTTTCTTGTTTTTGTTTTTTAAGAGAGA ...............xx..:...............:...x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -27398229 -66832173 +17331 chr4 + 190214555 62223137 62223136 62223446 310 TAACATCTAATCTAAAGGTTTTTTTCCCTCCTATGATTGATGGACATTTTTTTAA--GAATGCAGTTTGTCAAGAAGACTTTCCCTTTTCCTTCTTGAAATTCCTGTTTCAAACCAGTGGAAGCAATGTCCTGCCTGTGATGGCATTCAGGACATGAGGTATCCTTGTCTTTGACAGCAAAGGACATTTGTTTTGTTTGAG-TTGCACTCTTATCACTGACAACAACAAAATTGTCAAGTGTGTTATTTGAAACATCAAATTCAATAAGAACCT-TTGTGTATGTAAGCTACATTGTATATAATGTTTTCTTTC chr4 + 94230402 49865070 49865069 49865376 49865070 49865069 49865376 307 TAACATCTAATC-ACAGATTTGGTTTCCT----TGATTGACAGGCAATTTTCAAAAAGAGTGCGGTTTGTCAAGAAGTCGTTCCCTTCTTCTTCCAGAAAT--CTCTTTGAAACCAGTGCAGGCAATTTCCTGCCTGTGATGGCATTCAAGACATGAGATACCCTTGTCTTTGACAGCAAAGGACGTTGGTTTCATTTGAGCTTTTTCCCTTATCACTGACAACAATAAAATTGTCAAGTGTGTGATTTGAAACATCAAATTCGGCATGAACTTCTTGTGTAAGCAAGGGACATTGGACATAATAACTTTTTTC ............-.x..:...xx..:...----.......::.:..x....:x..--..:...:.............x.x.......:.:....:x.....--..x...x.........x.:.....x.....................:........:..:.......................:..x....::......-..x:x.:.................:.................x..................:::.x....:.-.......x.:...xx......x.:.....:x:..:.... 12M1D16M4D22M2I44M2D98M1I72M1I39M 251/303 82.8% 307/94230402 0.0% 11/303 3.6% 12358067 NA +4007 chr4 + 190214555 62227566 62227565 62227733 168 TGCAAGCTAGAGAGATAACAAACTGGCAGCATATTGCTATTTAAACTTTGTGACACA-----TGTTGCAGGTGCCAAGATAGGTGCAAAATTTTCAAATTATCACCTGGTTTGTTTGCAAGAAGGAAAAGCATCATGCTACTT---AGAGGAAATAGTGTGGCAATGTGATTCTAA chr4 + 94230402 49870480 49870479 49870651 49870480 49870479 49870651 172 TGTAAACTGTAGGGG-AAGAAACTGGAACCACACTGACACAGGCTCCCTGTGACATAAACACTGCTACAGGCGCCGAATTATGTGCAAACATCTCAAATTATCACCTTCTTTCTTTGCTGTCA--AAAAGACACAAGTCAGTTGGCAGAAGAACTAA-GTGTCATTGTGGTGCTAA ..:..:..:x..:.:-..x.......x.x..:.:..x:.:xx:xx.::.......:.-----..:.:....:...:.:x..x.......xx.:..............xx...x.....x:xx.--.....xxx..x.::.x..---...:...x..:-...x..x....:.x.... 15M1D41M5I61M2D18M3I11M1D18M 111/164 67.7% 172/94230402 0.0% 12/164 7.3% 12357086 NA +3170 chr4 + 190214555 62228908 62228907 62228971 64 TTCAACTGACTATGAGGGACAAAACAAAAACAAAAACAAATAAACAAAAAAACTCCCAAAAAAC chr4 + 94230402 9875518 9875517 9875577 9875518 9875517 9875577 60 TTTAAGAGATTAAGTGGGGAAAAA----AACAAAAACAAACAAACAAAAAAAACCCCAAAAAAC ..:..xx..:..x.x...:x....----............:...........x:.......... 24M4D36M 49/60 81.7% 60/94230402 0.0% 4/60 6.7% 52353390 NA +3180 chr4 + 190214555 62271494 62271493 62271600 107 TATATATATATATAAATATATATATATAAATATATATATATAAATATATATATATAAATATATATATATATAAATATATATATATAAATATATATATATATATATAC chr4 + 94230402 66642211 66642210 66642316 66642211 66642210 66642316 106 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACAGTTA-GTGCATGAAGCCATCAATTTAAGTAATTACAGCTGCATTTAC ....::......:x.....x:...:.:x...:.........:.....::.:...:.x.:.xx..-:.::..:..xx:..xx..x...:..xx..:.xx.::..x... 64M1D42M 68/106 64.2% 106/94230402 0.0% 1/106 0.9% -4370717 -89859685 +3090 chr4 + 190214555 62271509 62271508 62271565 57 ATATATATATATAAATATATATATATAAATATATATATATAAATATATATATATATA chr4 + 94230402 66642212 66642211 66642268 66642212 66642211 66642268 57 ATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATA ...::......:x.....x:...:.:x...:.........:.....::.:...:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -4370703 -89859699 +3089 chr4 + 190214555 62271552 62271551 62271615 64 TATATATATATATAAATATATATATATAAATATATATATAT--ATATATACACACACACTATTAGT chr4 + 94230402 66642211 66642210 66642276 66642211 66642210 66642276 66 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACAGTTAGT ....::......:x.....x:...:.:x...:.........--....::...:...:..x:..... 41M2I23M 48/64 75.0% 66/94230402 0.0% 2/64 3.1% -4370659 -89859743 +3009 chr4 + 190214555 62277117 62277116 62277157 41 AACAATATGAAAAACAAAACAAACAAACAAACAAAAAACCA chr4 + 94230402 57136539 57136538 57136579 57136539 57136538 57136579 41 AATACTGTAAAAAACAAAACAAACAAACAAAAAAAAAACCA ..:.x.:.:......................x......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 5140578 NA +3046 chr4 + 190214555 62277119 62277118 62277159 41 CAATATGAAAAACAAAACAAACAAACAAACAAAAAACCAAA chr4 + 94230402 31527602 31527601 31527642 31527602 31527601 31527642 41 CAACAAGAAAAAGAAAACAAACAAACAAACAAAAAACCCAA ...:.x......x.........................x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 30749517 NA +3056 chr4 + 190214555 62277124 62277123 62277167 44 TGAAAAACAAAACAAACAAACAAACAAAAAACCAAAATCTAATA chr4 + 94230402 4564871 4564870 4564914 4564871 4564870 4564914 44 TGAAAAACAAAACAAACAAACAAACAAAAATCCCAAGCCCGGTA ..............................x..x..::.:::.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 57712253 NA +3207 chr4 + 190214555 62277124 62277123 62277191 68 TGAAAAACAAAACAAACAAACAAACAAAAAACCAAAATCTAATATCTTCATCCAAAAGCAAATAAAAA chr4 + 94230402 37422001 37422000 37422068 37422001 37422000 37422068 68 TAAAAAACAAAACAAACAAACAACAAAAAAAAAAACATTTGAAATCTTCAGACTGAGATAACTAAAGA .:.....................xx......xx..x..:.:.x.......xx.x:.:::..x....:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 24855123 NA +3180 chr4 + 190214555 62287864 62287863 62287941 78 TGTATGTATATGTATATATGTATATGTACATATGTATACACACCCACATATATATACACATACATAGTA------TACATTCAG chr4 + 94230402 61270776 61270775 61270859 61270776 61270775 61270859 84 TGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCAGCAAAATGGTGCATTCAG ..x..:...x...............:::..::.::.:.x....:..::....x:......xx:::..:.------.:....... 69M6I9M 54/78 69.2% 84/94230402 0.0% 6/78 7.7% 1017088 NA +11256 chr4 + 190214555 62289144 62289143 62289555 412 TGAACATCAGTGAAACAATTTCTCTTTCTTCGTAGGTTCTTTCTGTATAGAGGATTAAATAGGAAAAAAAATTACGTTTCAGATCTTTTTTGCAAGACCAAAATTTT--------CTGGCCAATATTTGAACATTGCAAAGAATTGTGTAAGTAAAGA-TTATTCATTTAGACAGTGTTCTCATTTCAACAATAGCTCATTTCTAGTATTTAATTACATGATGTTCCAAATGATATCATATCATTCCAGTAGAATAGGG---------GAGCTTTC--CCAATCACTGTTTTGAATATTTCATCTAATTAGA-GAACAGAACTTTTATGTTGTAAGCATAATCTAATGTTGTAG-GATATAATCTGTATTTTATGTTTTTGGATGAAGAGGATGGGAGAGTGATCAGAGAAGAAATGTTTGAATAAACATTTAA chr4 + 94230402 49896051 49896050 49896444 49896051 49896050 49896444 394 TGGAGAGCAATGAATTAATTT---TTTCCTCAAAGTTCATGCTTTAATATAGAGCTAAATAA-AAAACCAATTAAGTACCAGATGACTATGACAAGGCTAGATTTTTTTTTTTTCCTGACCAATATTTGAAAACTAGGAAGAATTGCTAGAGAAAAGAATTATTCAATTCCAAAGTGTCCTCGTTTC----------------TAGTATTTAATTAAGTGCTGCTCTAAATGATAGCGTATCTTTTCAGTAGAATAAGGCAGGAAAAAAAGCTTTCCTCTACACACTCCCTTGAATATCTCTGCTAATTAGAGGAACAGTAATCTTATGTAGTAGGTATTATCTTGTATTGTAGTTACTCTTTCCCTGTCTTGTGTCC------------GGTGAGAGA--------AGAAAAAGTGTCTGAGTAAACATCCAA ..:.x.x..:....x:.....---....:..:x..x.:x.x::.xx...x..:::......:-....xx.....x..x:.....xx:.x.x:....:.:.:.x....--------...:............x.:.:x:........:xx:..x.....-.......x..xx.x.....:...:....----------------.............x:..x..:..:........x.:....x..:..........:..---------:.......--.:.xx....x::........:..xx.........-......x.x.:......x...:.:..x....x:.:......-x.:x:xx..:x.:.:..:...::------------.:..:....--------....:..:...:...:.......::.. 21M3D38M1D44M8I43M1I28M16D56M9I8M2I34M1I41M1I23M12D9M8D27M 267/372 71.8% 394/94230402 0.0% 62/372 16.7% 12393093 NA +3090 chr4 + 190214555 62325122 62325121 62325171 50 TTTATATATATCTATATAAATATATATATACATATATACATATATATACA chr4 + 94230402 50629530 50629529 50629579 50629530 50629529 50629579 50 TTAATATATACCTATATAAATATGTATACACACATGTAAATACACAAACA ..x.......:............:....:...:..:..x...:.:.x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 11695592 NA +3087 chr4 + 190214555 62325145 62325144 62325192 48 ATATATACATATATACATATATATACACACATATATATATACATATAT chr4 + 94230402 50629533 50629532 50629580 50629533 50629532 50629580 48 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACAT ........x......x....:...........:..x...:...x.:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 11695612 NA +3617 chr4 + 190214555 62325954 62325953 62326032 79 GTGGTGCACACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........:x::........x.xx.x...x..........::.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -13707247 -80523155 +3026 chr4 + 190214555 62326074 62326073 62326128 55 AGTGAGACTCTGTCTCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAA chr4 + 94230402 28037150 28037149 28037204 28037150 28037149 28037204 55 AGTAAAACCCTGTCCTGAGGTGGCATTAAAAACAAAACAAACAAACAAACAAAAA ...:.:..:.....:::.::xx:x.x:............................ 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 34288924 NA +3017 chr4 + 190214555 62326096 62326095 62326129 34 AAAACAAAAACAAAACAAACAAACAAACAAAAAA chr4 + 94230402 33446107 33446106 33446140 33446107 33446106 33446140 34 AAAACAAAAATAAAACAAACAAACAAACAAAAAA ..........:....................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 28879989 NA +3117 chr4 + 190214555 62352306 62352305 62352388 83 TTGAACTCCTAAAAAAGCAAAAAAAAAAAAACAAAAAAAACAAATGCAGAACAATATATGCATAAACAAACAAATGAAAAACA chr4 + 94230402 26192592 26192591 26192674 26192592 26192591 26192674 83 TTGCACTTCTAGACTGGAGAAAAAAAAACAATGAAACAAACATAACCTACACAAAAAACTCAAAAACAAACAAAAGAACAACA ...x...:...:.xx:.x:.........x..::...x.....x.xx.x:x....x.x.:x..x...........x...x.... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 36159714 NA +3150 chr4 + 190214555 62353667 62353666 62353725 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.:.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -13679539 -80550863 +3000 chr4 + 190214555 62374710 62374709 62374777 68 TTTTTTGTCTTTCCTCCCTCCCCACCCTTCCTTTTCCTTTTGTCTTTCTTCTTCCCTCCCTTTCTTCC chr4 + 94230402 57372029 57372028 57372096 57372029 57372028 57372096 68 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTC ...:..x....x:.:.:x...:.x::..:.....xx..x:...:......::..:.......x...:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 5002681 NA +3103 chr4 + 190214555 62374720 62374719 62374787 68 TTCCTCCCTCCCCACCCTTCCTTTTCCTTTTGTCTTTCTTCTTCCCTCCCTTTCTTCCTCTGTCCTTC chr4 + 94230402 14595055 14595054 14595122 14595055 14595054 14595122 68 TTCCTAATTCTCTAACCTCCTTTTTCCTCTGTTTTATTCTTCTCCCTCCACTTCCTCCTCTGTTCTCC .....xx:..:.:.x...:.:.......:.xx.:.x.::.::.......x:...:........:..:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 47779665 NA +21288 chr4 + 190214555 62377565 62377564 62378186 622 AAATATTTACATGTATATTTACATGAGACTTCATTGACAGATTCTCACCACCAAACTTC---ATCAATCAAGCATCATTTGGAGTGAATTGGAAAGATACACAT---TCTCAAAATATCTTCAAAAG-ATTTAATGATGTCGCTCTATGTTTCTAAAAGTTACAGTGACTTTGGCACCTCATCATTTTACTT-GTCTTTTGGAGTCTCAAGATAATAGAAAGGGATTAATGAAAAGGATAGGATAATTTGGGAAGAAATTGTGGTTTGCAACTGAGCTATCAAATAAATCACCCTCTAAAGGAGACAACAATAGAG-AAGATTTTGCCTCTAGCCATTGGGTAAAGATAAGCATTCAAAATGAGACAATGAAGGCTGGGGTAGATAATAGCTTATCCAGCA-GAGTGATGTTTCCAATTAATGTTAATAGAAGCATATAGAATTTCACAATACTGCTGTTAGCCATTCTTAGAATTTTGTTAACATCTGTATGCCTATCCTTTATTCAACACCTTGAA---TAAAA--AAGTGGGGA-----AAAATTGAATCAA---TGCTTCTTTATCGAAGGTAA----GGGAGAT----TTTAATTGAGAATCACATTTTTTAAAAGTGGTTTAGAAAAAAGTAAGGTGGTTTCGCATT chr4 + 94230402 49916278 49916277 49916916 49916278 49916277 49916916 639 AAATACAGATAGTTTTATTTACATG---TCTGGAAGACAAATACTGACCA--GATCTTTTTTATCACTACTGCACCACTCCAAGCTAATTGGAAAGACAGAAGGACATCACAGAATCTCATCAAAGGGATTTAGAGATGTCATTCTGAGTTTCTAAAC-TTCCAGTGAATTTGGCACCTAATTTTTTTACCTAGTCTTTTGGAGTTTCAAGATAATAGAAAAGAAATAATGGAATGGATAGGATAATTTAGGAAGAAATTGT-GTTTGAAACCGTATTATCAAATAAATTACCCTCTGTGGGAGAAAACAATAGAATGGGACCTTGACTTTACCAGTTGGATAAAGATAAGTATTCAGACTGGGACAACTAAAGCTTAGGAACATAATAGCTTGTCCATCAGGGGCAATGTTGCCTATTAATGTTAATAGCAGCATATAGATCTCTTCAGTATTGCCATTGGGCTTGCTGGGAATATTGTTAACACCAGTGCACCCATCTGCTATTAAGGAACTGAAAGGGCAAAAGTAAGTGGGAAAGAGCAAAACAGAATGAGGATCAACTTCTCAGTGAAGATAAAATTGTGTTATGTTATTTAATTAAGCA--ACATTTTTTCA----GGTCCGAAACAAAGCAA-GTGTATCTGCATT .....:xx.:.xx.x..........---::.x:xx....:..x..x....--:.x...:---....x.xxx...:..:.:x:..:x...........:.x.x:x---..x..:...x..x.....:.-.....:x......::...:x.........x-..x......x..........x..:x......:.-............:...............:.:.x.....:..x..............:............-.....x...:.x::............:.......:x:.....x.........:-::..::...x..:..x.x:....:..........:.....:.x..:.....:x..:...x:..x.x..........:....x..-.:.::.....x..x..............x..........x:.::x..:..:...::..:.x.x.x..x:....x.........:.x..:::..:...:x:....x.:x.x..x:..---:....--.......:.-----....:x....x.:---::x:.::.:.x:....:...----.x.xx..----.......:..x.--.........x.----...::::..x....:..-...xx.::..... 25M3D22M2D7M3I42M3I20M1I30M1D33M1I69M1D53M1I84M1I116M3I5M2I9M5I13M3I20M4I7M4I12M2D11M4D17M1D13M 445/608 73.2% 639/94230402 0.0% 45/608 7.4% 12461287 NA +3535 chr4 + 190214555 62383045 62383044 62383086 42 TTCTTTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:...:...................x................ 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% -12865002 -81365400 +3413 chr4 + 190214555 62383049 62383048 62383090 42 TTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::.................x.................. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -12864998 -81365404 +3467 chr4 + 190214555 62383050 62383049 62383088 39 TCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% -12865000 -81365402 +3102 chr4 + 190214555 62383051 62383050 62383086 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 49781747 NA +3139 chr4 + 190214555 62383053 62383052 62383092 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -12864996 -81365406 +3316 chr4 + 190214555 62383053 62383052 62383088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 49781749 NA +3102 chr4 + 190214555 62383055 62383054 62383090 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 49781751 NA +3562 chr4 + 190214555 62389946 62389945 62390044 99 AGTTTCCAACCTCATCTGTGGCTATATATATGTATATATATATATATGTATATACACACACACACAC--------ACATATATATA---TATACATATATATATATATTT chr4 + 94230402 60831516 60831515 60831625 60831516 60831515 60831625 110 agttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTT ....:...xx.x:....:.xx..:.x.x.x.x.x.x.:.:.........:...........:.....--------....x.....:---.:.:.::..:.:.:....... 67M8I11M3I21M 71/99 71.7% 110/94230402 0.0% 11/99 11.1% 1558430 NA +3034 chr4 + 190214555 62389967 62389966 62390029 63 CTATATATATGTATATATATATATATGTATATACACACACACACACACATATATATATATACA chr4 + 94230402 61270773 61270772 61270835 61270773 61270772 61270835 63 CCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .:..:x....:.x.:.......:...:..:::..::.....x....x...:....x:..:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 1119194 NA +3244 chr4 + 190214555 62389986 62389985 62390032 47 TATATATGTATATACACACACACACACACATATA--TATATATACATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ........x...:................x....--.........:... 34M2I13M 43/47 91.5% 49/94230402 0.0% 2/47 4.3% -27433946 -66796456 +3084 chr4 + 190214555 62389993 62389992 62390025 33 GTATATACACACACACACACACATATATATATA chr4 + 94230402 67195545 67195544 67195577 67195545 67195544 67195577 33 GTATATACACACACACACACACATATATATATA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -4805552 -89424850 +3025 chr4 + 190214555 62389997 62389996 62390048 52 ATACACACACACACACACATATATATATATACATATATATATATATTTGAAT chr4 + 94230402 74526078 74526077 74526129 74526078 74526077 74526129 52 ACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT .:...........::x.....:.:.x.....:.::.......:.....::.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -12136081 -82094321 +11000 chr4 + 190214555 62400902 62400901 62401516 615 TATAAGGGCTCATGTATGTGTCAATGACATTTTGCAAACAAATGAACAATGATGCTTCTGAGGCTATTAAATTTGAAATCAGAAGAAAATGATAGGTAGCACTCATCATGTAGTTAAATTATGCTTACTAGCTACTGGAGGATAAGATGTAGTGTAGGC-------AATCAATCAATTTTGCAGCATATT----TTTAATTTCTCCAGATATTC-GTAGGGATTGATTGCTATTGTTCCATTAGGTAACACCATTGCATTATTTTAAGGTTGATATCATTAGCCCCAGGCACATGCAAAATATAAAAACTAAATGTTTAAAGAAAAGGTGACCTTCTATTTCAGAACACAGATAAATAGTAAATGAGCTGTATAACCTCCAACATTGATGTTTCAAGGTAATTTAATAACAAGACCCTTAACTAAAATACTGAAGTG------------CAGTACTATACATCACACTTAGA-GGCATTCACA----GCTTGTAAGGACAATTAGTTACAGTGACTTTTCCAATTCCACCATATTAAATTCAATTAATCTATCATTG-TTGAAAGATACCTTGGTTTATTAGAC--ATTTTCTAGGCATTTCGGTCATTAATAACACTTTAAATTCATATTTGTAGCCTGGAGAGAC chr4 + 94230402 49920984 49920983 49921583 49920984 49920983 49921583 600 TGTCAGCATTAATGTATGTGCTGGTGACACTTCAGGTATAAATGAGGAA-----CTTGAGGAGCTCTTAAATCTGAAGATCGAAGATGATGAAATGTGATATTCTTCCAGTATTTAAATTAGGCTTAGCAACTACTAGGTGATG-------GTTCAAGCCCTTTCTGATCTATCATTTCTTCAGTTTATTAGCCCTTAATTTCTCCACCTTTTCTGAAGGAAATGATTGTTATTGTTCTGTTAATCATCTTCACTGAATTATTTTTGGATCACTATCGCTAGCTTTGGATACAAGCACAAACCCAGTTCTCTGTGT-----GAAAAGATGACTATATTTTGTAGCCAACAGAGAAA-------------ATTTGATCTTCAGCGTTAACATTTAGAAGTAGTTTGATAACAACTTGCTTTGCTAAAACAAACAAACAAACAAGCCAACTCAACATTTTGTATTACATGTACATTGCCTCCACATGATACATTTACGAAGAGCTTGTTATTGAAGATTTTCCAGGCCTGCTCTATTAAACTCAGTTTGGGTTTCACTGATTGTGAGAC-TCTTTGTTTTTCACCCTTACTTTCTTTGCATTC---------ATAACGGT----ATTCATGTCTGTGA---GGAGAGAC .:.x..x::.x.........::::.....:..::x:x.:......:x..-----...xx.::...x......:....:x:x.....x:....x.x..:::.:..x..xx...x........x.....x:.:.....:.:x...:-------..x:.:..-------:...x....x..:.x...:x....----:............xx.x...-.x...:.x......:........::...:x:.x.x:..:..x........x:.:.::x....::....::::.::...x...x..xx:x.:xx..xx:...-----......:....:x.x.x..x:..xxx.....x...-------------:.x.:.:..:..:.:..:.::...x:.:...:...:.......xx:x...x:......:.xxx..:::------------..::.:.x.::..:...:x..x.-x..x.:....----:.x.x..x.:.x.::.x....:x.x::x.......:x:.::.:x.......:...:..x:xx.x...:..-...x:...:-:...x....x.:.xx.--.:.....xx.....:---------.....:x.----......:.:...::---........ 49M5D90M7D8M7I24M4I20M1I101M5D35M13D68M12I23M1I10M4I70M1I9M1D16M2I15M9D8M4D14M3D8M 364/568 64.1% 600/94230402 0.0% 79/568 13.9% 12479918 NA +10878 chr4 + 190214555 62413085 62413084 62413695 611 CAGAAATGTAAGCTGTGAATCAAT-AATAACCATGCTGGAAATTAACCTCCAAGGGAAAGGTAAATCTACTGAGATTGTA-CAAGACAGAACTGCATTAATGCCAGTCAATTTTATTTAGATTGAATCGCCTACAACTAGAGCTGAGTTAACCAGAGCCCGCAATTTCTTTTTTTATTTCTTTCCTTTAGTAGTGGCCTAGGTGATTTGATTTCAATTCACCTGGGGTTTTGAGAAACAAAATCCTCCCCCATAAAAACTGCATGGTGTTTATGACCACCACAGGGATA------------------------------------------------GTTTAAAAAACAATGAAAAAAGTGGGCTTATGAAAAATAAAGCTGGCTAATTACAGCAAATGGGCTTAATTTAAAAACCACAGGTGCCTCTTTTATAAGGTTTGGTTGTGCTCTTGCCCATAGCATGTTAATAT-ATTATGGGATAAAACTGAAATC----TTTGCTGTGGCCAGCTTTAAATGGGGGAACATTTGGTTCAACTCTATTTACAGTTTGGATCGTATATGATGTCATAGAAAATATAAAACCTGCAAAGACATGTTTCTGCCTTGAGGTATATAATATCTAGTTCATT--ATTTATGAAATTCAAGTAAAATAATATCAATT chr4 + 94230402 49922715 49922714 49923359 49922715 49922714 49923359 645 CAGAGAAGCCGGCTTGTAAACAATGAACAATTATGCTGGGAATTAATGTCCAAGGAGAGGATAGATTCTATCAGAATATAACCAGATGGAA----ATTAATGCTAGGCAAGTGTATAAGGTTT------CTGACAACTACATCCAAGTCAGCCAGAATGCTTGGTTTCCCTTGT-----CTGCCTTGTAAT--TGAGCTAGAAGTTTCTACTTCTCTTCCAGCAAGATTTTAATTTGTCGGGTCCGTGCTCAGTAAAAGCAGATGGCTTTTATGGCCTCCACAGTATTGCTATTGCttttttcttttttcttttcttttctttttttttttttttttttttttttAGTGGAGGAAAAAGGAAAGCTGTGAAAAAGGA----GGCTAATTAGAGAAAATGGGCTTAATTTGGAAGCCACAGGTCCCACTTTTATAAGCTTTTGTTGAGCTTTTGCCCGCAGTAAATTTATACAAGCTTTGGATAGATGGTAAATCTCTGTTTGCTATGGCCTGCTTTAAAT-GAGGAGCTTTCAGTACTGTTTTGTTGAGAGCTAAGGGCACAGATGAGGTCATAAAATCAACAAGTCCTGGGAAATGCCCATTCAGCTGGGAGGAATGT-TTCCTTGGATCACTTGTTTTTTTGGATCTGTGTAAAGTAGTATTTATT ....:.x.:x:...xxx..x....-..:..::.......:......:x.......::.:.:..:..::xx.x...x.:..-.x...::...----........:..x...x.x...xx:.x..------.:x.......x.x.::...:.:.....::x.x:::....::..x.-----..x:.:.x..:.--..:x....:x.x..:x.:...xx...xxx:::.:....:.xxx::x:::...x:x.:..xx....x::x....:x......:..x......x:x.:------------------------------------------------x...xxxx.::::x.:......x:::x:.:.......x:.----.........x..x...............::..:........x..x..........x...x....x...:......::..:.x:..x...:-.x:x.x.....:.xxxx.....----......:.....x.........-.:...:.x..::..x.x::.:.:..x.x..:.x:.:x.::.x....x......:..xxx.:..:x....x:..:xxx:xx...x..:xx....x..:.-x.x::.:.x...:.--x...x.x::..:::x.....:..:...:x... 24M1I55M1I10M4D28M6D45M5D12M2D96M48I40M4D90M1I22M4I22M1D98M1D14M2I32M 369/588 62.8% 645/94230402 0.0% 80/588 13.6% 12490370 NA +3047 chr4 + 190214555 62461345 62461344 62461406 62 TATATATATATATGTTTAAAGAGTATATATATATATATATATATATATATATATATGTTTAA chr4 + 94230402 34211738 34211737 34211799 34211738 34211737 34211799 62 TATAGGTTTATGTGTTTTATAAGGATATATATATCAGCATATATATACATATATATGATGAA ....x:.x...:.....x.x:..x..........xx::.........:.........x.x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 28249607 NA +3096 chr4 + 190214555 62470250 62470249 62470311 62 TGTTTCCTTCCCCCCCTCCCCCCTTCCCCCCTCCCCCTCCCCTCCCCTTCCCTCCCCCCTTT chr4 + 94230402 28416544 28416543 28416605 28416544 28416543 28416605 62 TGCTTTCATCCCCCCATCCTCTCTTCTCATCTCCCCCTCCCCCCCCCCAACCGCCTTTTTCT ..:..:.x.......x...:.:....:.x:............:....:xx..x..::::.:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 34053706 NA +3295 chr4 + 190214555 62543933 62543932 62544013 81 TATAAATTAATAAATCATTTCTCTTTCTCCACAATTTTCACAAAACACACACACACCCCTAATACACAGAAAAATGGGAAA chr4 + 94230402 66183424 66183423 66183502 66183424 66183423 66183502 79 TATAAGTTTTTACA--ATTTCTTTTTTTCCTCTTTTTTCACAAGTTACTCACACAGCTTTAGTACAGAGAAAGATATGAAA .....:..xx..x.--......:...:...x.xx.........:x:..x......x.::..:....x.....:..:x.... 14M2D65M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% -3639491 -90590911 +3148 chr4 + 190214555 62575898 62575897 62575977 80 TCCTCCTTCTTTTCCTTCCTTCTTCCTTCCTTCCTCCTTCCTTCTTTCCTTCTTTATTCCTTCTTTCTCTCTCTTTTTCT chr4 + 94230402 57538432 57538431 57538511 57538432 57538431 57538511 80 TCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ..:..:xx:..x.:x:.::......:.:x..:..........:..x.:x..:.:.x......:x...:...:..::.:.. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 5037466 NA +3293 chr4 + 190214555 62602049 62602048 62602216 168 TTTCCTTCCTT--CCTTCCATCCTTCCTTCCTTTCTCTCTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCT------------------------------TTGTCTTT---TTCTTTTCTTTTC--------TTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTTCTTCCCTTT chr4 + 94230402 75267901 75267900 75268111 75267901 75267900 75268111 211 TCTCCTTTGTTTACACTTCACGCTCCTTTTCCTTCCATCCATTTTCTACTAATTATAATACTTCATTTTTTTCTATTCAGTTTGGAACCCAGAAGCAGTAGCACTTGTCTTTATTTTATTTTCCTTTCATTGTCAGTTGTTTCCTTTGTTTCTTATTCTCTTTTTGCTCTAGCCTTTTTTCCCAATTATTCATTCACTTCATCCTCTTTTT .:.....:x..--.x:.:..:x..:.:..:.:...:x..:x...::.x.:xx:.x.xx.x....x..::.....------------------------------........---..x.....:....--------..x:..:....x......x......:...x....xx.::.....::.xx.:x:..x...x:..:x..:..::... 11M2I61M30I8M3I13M8I75M 110/168 65.5% 211/94230402 0.0% 43/168 25.6% -12665852 -81564550 +4300 chr4 + 190214555 62602049 62602048 62602202 154 TTTCCTTCCTTCCTTCCATCCTTCCTTCCTTTCTCTCTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTGTCTTTTTCTTTTCTTTTCTTTCTTTCTTT----CTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATC-------CGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCAT-TTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTT-TCTCCTCCATTCTT ...:..x:..:x..x.:x.....:........x..-------.x::.x:.:..x.x..x...:...:x........x..:x.-....x.:.............:----.::x.:..::.x:.:.:..x....::......:..-....:::.x..... 35M7D40M1D21M4I35M1D14M 99/145 68.3% 149/94230402 0.0% 13/145 9.0% 12425783 NA +3295 chr4 + 190214555 62602116 62602115 62602206 91 TTTCTTTGTCTTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTT chr4 + 94230402 49829841 49829840 49829928 49829841 49829840 49829928 88 TTTCTGTGGCTTATTTTTGCCC---ATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT .....x..x...x..:..x:.:---x...........:.........::..::.:..:.:.:.:..:::.:x.x.x.x.x....x...... 22M3D66M 60/88 68.2% 88/94230402 0.0% 3/88 3.4% 12772275 NA +3283 chr4 + 190214555 62602122 62602121 62602207 86 TGTCTTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTT chr4 + 94230402 57372023 57372022 57372099 57372023 57372022 57372099 77 TGGCTTTTTCTTTTCTTGTCCCT---------GTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ..x..............x..::.---------x.:..:......:....xx::x..x.:...:..........:...x....:x.. 23M9D54M 57/77 74.0% 77/94230402 0.0% 9/77 11.7% 5230099 NA +3426 chr4 + 190214555 62602126 62602125 62602215 90 TTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCT-CTCTTTCTTTTTTTCTTCCCTT chr4 + 94230402 89201232 89201231 89201322 89201232 89201231 89201322 91 TTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTT ...........:...:....:..:xxx..x.x:.:....:x:.xx:.......:........:.::x.-.:...:...::.x...:.x... 68M1I22M 61/90 67.8% 91/94230402 0.0% 1/90 1.1% -26599106 -67631296 +3307 chr4 + 190214555 62602127 62602126 62602234 108 TTTTCTTTTCTTTTCT-----TTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCT-----CTCTCTTTCTTTTTTTCTTCCCTTTGAATGTGTCA-CTCCAAGG chr4 + 94230402 59835407 59835406 59835518 59835407 59835406 59835518 112 TTTTTTTTTCTTGTTTCAAACTTCTTACTTTATTTCTTGTTTTCTCTTTTCTCTTTTTCCTGTTTACACTGGGAAAACTTTTTCTTGCTGTGTT-------ATTCTGTCATCTCCAAGG ....:.......x.:.-----.....x....x......x..:............:.:..:.x...x.x..-----xx..:......x:.x.x..-------.x.x.....-........ 16M5I49M5I19M7D9M1I8M 79/101 78.2% 112/94230402 0.0% 18/101 17.8% 2766720 NA +3102 chr4 + 190214555 62602136 62602135 62602207 72 CTTTTCTTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTT chr4 + 94230402 28615945 28615944 28616016 28615945 28615944 28616016 72 CTTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT ...:.:.:....::...::.:...:x::..x...x..x:...x.x....:.x.......:....:.::.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 33986191 NA +3030 chr4 + 190214555 62602163 62602162 62602211 49 CTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTTCTTC chr4 + 94230402 72001429 72001428 72001477 72001429 72001428 72001477 49 CTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCC ..::.:..::x...:..x.......:...........:.........:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -9399266 -84831136 +3459 chr4 + 190214555 62611666 62611665 62611731 66 TGTGTTTGTGTGTGTGTGTGTGTGTGTATAACGACATATATACATATATCTATGTACATACACACA chr4 + 94230402 85834541 85834540 85834606 85834541 85834540 85834606 66 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA .....:.................:.xx..:xx.:....:...::..x..x:....x:..:...... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -23222875 -71007527 +3197 chr4 + 190214555 62623205 62623204 62623252 48 TTCTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTAGAGG chr4 + 94230402 44980313 44980312 44980360 44980313 44980312 44980360 48 TTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGG ...:..:.........:x.:............:.........x.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 17642892 NA +6036 chr4 + 190214555 62653587 62653586 62653818 232 TAAATTTCAAATAATGGGATTAA--AATTTACAATAGGTATATCTATTTATAGAATTACAGTTATTTGTAATCAGTCTAAGCAGAGAGATTATAGGAATTGTCTCTATTTCCACAAAATAAATATGG---CAGACTATTGAGGATGTCTTATGTACATTGTAATTT-CATTTATGGTTTTGTTTACTTAAGTAATTGGAATGTGACAGACCCTGATAAT-TTTTGGTTTCACAAATTGG chr4 + 94230402 49965259 49965258 49965492 49965259 49965258 49965492 234 TAAGTTTCAAATCTTAGTTTTCCTTAAATTACACTAGTTGTATCTACTTATAAAA--ACAGTTTGTGGTAATCAATTTGAACCGTGG--TGATGTGAGTTAGCCTTCTCTATAAAGAATATATTTTGACTTAGAACATTAGAGGTATTTTCAATGCTGTATGATTTTCATTTATGATTT-GATTACATAAGTAATTGAAATGTGTCAGATTCAGATAATATTTTGTTGGAACAAATCGG ...:........xx.:.xx..xx--..x.....x...x.:......:.....:..--......xx.x.......:.:.:.:.x.x.:--.x..:x..:..:x.::.x.:.x:.x.:....x..x.x.---:...x:...:::.:.:.:..xx:.:.xx.:.:....-........:...-.x....x..........:......x....::.x......-.....x.xxx......:.. 23M2I30M2D30M2D38M3I36M1I12M1D39M1I19M 156/227 68.7% 234/94230402 0.0% 12/227 5.3% 12688328 NA +3726 chr4 + 190214555 62663384 62663383 62663592 209 TTCCTTTTTTTAAAGAGGCTGAAAACATTACTTTATA--TATATATATATATATATATATATATATATATATATATATATATAATTTTAAAATTTTTATTTGTCACATTTTCTTTATTCTTTCATCCATC---AAAAGATACTTAGGTTGT--TTTCATATCTTAGCTATTAT-------GAAT-AATGCTGCAATATACATATCATTTGACATATTG---ATTTCA chr4 + 94230402 65285547 65285546 65285773 65285547 65285546 65285773 227 TTCAGTTTTATAATTAGGTGAAATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCTACTCATCTTGAAACTAGTTTTCCAACCATTGGAATAATATACATATTTTATAATTCTTAATCTGAGCTATTACTTTCTGAGAATAAATACTCGTAGATACAATACACTTTGTGTATTGTATATTTCA ...xx....x...xx...:x:..x.::.:.x.x.xx.--...x..:.......:....x.........x.:.:.:.x....x...x...xx......x:.xx...:x..xxxx:..x.:..:..x....:---.x..x....x..xx..:.--..::xx....x........:-------....-...:..xxx.x.....xxx..:..x:::.....---...... 37M2I91M3I18M2I20M7I4M1I33M3I6M 139/209 66.5% 227/94230402 0.0% 18/209 8.6% -2622163 -91608239 +15289 chr4 + 190214555 62670687 62670686 62671123 437 GCCAGCTGCTAGGGTCATGTCCTAAATATAGCTTAAACAGCAGGCTCCGATCTGATGAAACCTGACCGGAAAT------CATGGAGCAAACAGAAGCTCAGCAGTTGCTCATATTTAAGATTCAGCAGGCACACAAAGCTGAAAGTACCTCTTCTGCTTTGACATTATCTATAGGTCCAATCCTCAATATGCTGATTCTATCATAATACAGAAAATTGGTTAATTCCCTCTGGAAATTAACAATAAGA--AAGTCTCTCTTTGAATTGCTCTTGCTTCTTCTTTTGATTGGTTGATGCTATCTTTCCTTTACCTGA-----GGATAAAAGAAACATTTTAAAAG--AAGTGTATCCATTTATAAAACAGCTGCACATTTTCTGTATGTTTTCAATGACATCTCATAACATGAGAACTGATATGTGCAAAAATAAGTGAGGTAGGTATACTCC chr4 + 94230402 49983742 49983741 49984170 49983742 49983741 49984170 429 GTCATCAGCTGGGCTGAAGTGCTTATTGCAACT---GCAGTACGTTCTAATAATGTGTACACTGATGGGGAAAAAACAACGCAGAGCAAACAGAAGTGAGGCAG-----CATGTTTGAGATTCAACTGACACACAAGTCTGAAAGCACCTCTACTGCTTTGATATTATCCACAAGTTCAATCTACAATGCGCGGATTCTATCATAATGCAGAAAATTGGTTAATTCCCTCTGGAAATTTACAGTAAAAATAATTCTCCCCATGAACTGCTCTCACTTCTTCCTTTGATTTGGTGATGCTATTGCCTTTATACTTAAGCAAGGGACAAAGAGAGCATTTTTATAGCAAAGTGTGTGCATTTGCATAAACTCTGCATGCTCTGTGGGTGT--------ACTTTACACTTCCTGAGTACTGTCAGGTG-------AAGGTAATTAGGCATATTTC .:..x.x...:..x.x.x..x..x.x.::.:..---:...:.x.:..::..xxx:..x.xx....:x..:..x------.:::.............:xx:....-----...:...:.......:.x.:.......:x.......:......x.........:......:.:.:..:.....:x....::..x..............:..............................x...:...:.--..x....:.:x....:......::.......:.......x.x.........:x::::.x...:.:.-----...:...:::.:......x.x..--......:.x.....::.x..xxx.....:::.:.x..x:...--------..x.:x..:xx.x....x....x:.x...-------...xx.:x....:...:.:. 33M3D37M6I25M5D139M2I66M5I23M2I42M8D29M7D20M 295/414 71.3% 429/94230402 0.0% 38/414 9.2% 12686945 NA +3188 chr4 + 190214555 62688161 62688160 62688264 104 TATATCCATATATATATCCATATATATCCATATATATATATCCATATATATCCATATATATATATCCATATATATATCCATATATATATATCCATATATATATC chr4 + 94230402 29286186 29286185 29286286 29286186 29286185 29286286 101 TATATC---ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTTAAGATC ......---.....:..x..:::.x.xx......:.x...xxx.x...:.x:.x:.:.x......x.....x.:....:..x....::....:..:.xx.x... 6M3D95M 68/101 67.3% 101/94230402 0.0% 3/101 3.0% 33401975 NA +3148 chr4 + 190214555 62688229 62688228 62688328 100 TATAT-ATATCCATATATATATATCCATATATATATCCATATATATATATCCATATATATATCCATATATATATCCATATATATATATCCATATATATATC chr4 + 94230402 29286186 29286185 29286286 29286186 29286185 29286286 101 TATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTTAAGATC .....-....x....:.:::.x.xx......:.x..xx.x.x...:.xx::..:.x......x.....x.:....:..x....::....:..:.xx.x... 5M1I95M 67/100 67.0% 101/94230402 0.0% 1/100 1.0% 33402043 NA +3148 chr4 + 190214555 62688255 62688254 62688354 100 TATAT-ATATCCATATATATATATCCATATATATATCCATATATATATCCATATATATATATCCATATATATATCCATATATATATATCCATATATATATC chr4 + 94230402 29286186 29286185 29286286 29286186 29286185 29286286 101 TATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTTAAGATC .....-....x....:.:::.x.xx......:.x..xx.x.x...:.x:.x:.:.x......x.....x.:....:..x....::....:..:.xx.x... 5M1I95M 67/100 67.0% 101/94230402 0.0% 1/100 1.0% 33402069 NA +3491 chr4 + 190214555 62703291 62703290 62703394 104 AATACCAGAGAGAGAGAGAG--AGATGAGATA----GGTGTTTTTTGTTTGTTTGTTTTTTCTTTCTTTCT-----------TTCTTTTCTTTTTTTTTTTTTTGAGA------------CAGAGTTTCACTC chr4 + 94230402 28559372 28559371 28559504 28559372 28559371 28559504 133 AATAATAGGAAAATAGAAAATTATCTGAAATACTTTGGTGTTTTTTGTTTGTTTGTTTTTTGTTTTTTTCTGGAATGTTGTGTTTTTCTCCTTGTGTTTTGCTTGAAATGTGCTTGTGACCATTGTTTCACTC ....x:..::.:.x...:.:--.xx...:...----.........................x...:.....-----------..:..:..:..x.x....x:....:.------------..xx......... 20M2I10M4I35M11I26M12I13M 81/104 77.9% 133/94230402 0.0% 29/104 27.9% 34143919 NA +3078 chr4 + 190214555 62718204 62718203 62718273 70 CGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAAAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x::.--......:...........:.........x.xx.x:..xx:.x.........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -13314993 -80915409 +3030 chr4 + 190214555 62742007 62742006 62742092 86 GTTATAGTTATATATATAGTTATAGATATATGTATATATACAAACACACACACATATAACAAAATGTCTCTTAGTGGAATATTTTT chr4 + 94230402 41650573 41650572 41650658 41650573 41650572 41650658 86 GTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTTTTCTT ...x...::x..:..x.x:...x.x......:........:.x..........:...xx:.x:.xx.x.:.:.:..x.:.x..:.. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 21091434 NA +3351 chr4 + 190214555 62756447 62756446 62756555 109 GTATTTTCTTTTTTCCTTCAGAAAAGTGATACAGTTTTTACTTTTTCAGTT---GTTAAAAAAAAG-------------------CTAAGCTTCAATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325437 27325436 27325556 27325437 27325436 27325556 120 GTTTCTCCTTCTGTCCTCCAGAA-----------TGTTCTCTTTCTCATTTAGAGCTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..x.:.:...:.x....:.....-----------.x..:x....:...x..---.:.:.:.::..:-------------------..:.:...x...:...........:.........::...:...... 23M11D17M3I12M19I46M 73/98 74.5% 120/94230402 0.0% 33/98 33.7% 35431010 NA +5979 chr4 + 190214555 62777145 62777144 62777502 358 AGTGTGTTCATCTTTTCATACTTAATCACTGTAATGAATGACATTGTTCAGTCAACACCAAA--GTGCTAAGTTTTTCTAATTT-TCTTTACTTCCATCTGTT---AAACAAAATTTGAAGATCAAGTGTTTT---GTGTTTAATTTAGTTCACAGGAATGCTTGTGTGTTCCTGATTCAATTTAGTCATTTTCCCTCAATGGCCATGAAGAGCTGTGTTAAATTGAAGTGTTATTAGAGTAAAGTGCTCTGGTATTTAGAATACACCATGGGGTTAGGGGAATGTTAATTGCTATCAAGTGAAAACATGGACTATAACATCTACGTGCAATGTGCTTTTATTATAAA---AATGATAAAAATCTAGAGA chr4 + 94230402 50020508 50020507 50020849 50020508 50020507 50020849 342 AGTGTTTTCATCTTAATATGCTT--------------------TGGTTCGATTAAAACTGTATTGTGCCCATTTCTTGTTATGCATTTTTACCTTCTTTTTTTCCTAAATGGACTTTG--GCTCATGTATTCTTGAGGTTTTATATCATTTAAGCTGAATGCTCTTGAGTTCCTGA----ATTCAATAATTTTCTCTTAATGACCACGAAGAGTTTTGTTAAGCTAGAGTGCCATTAAACTGAAGCACTGTAGTGTTTAGAGCCCAGCA-ATCACTGGGGGAAAGCCTACAGGTAGAAAATAGGATTGGAAATTG-AACAAAGCCGTGAGGGGTTCATTTGCTGTGAATTCAGTGATAATCACCTGGAGA .....x........xx:..:...--------------------.x....::.:..x..::x.--....:x.x..:..x.x..x:-.:.....:.:.x.:.x..---...:::.x....--.x...x..:..:.---.xx....xx.:.x..x.xxx.......:x..x........----...:.:.x......:..:....:...:......:.x......::.::....::....:.x.:...::..x.:..:......::x..x..-:xx::.:......x.::x.:x.x..xx..:.:::.x::x::.:.:-....xxxx....x::x..x.x...::.:.:..---.:......xx.:..:.... 23M20D19M2I20M1I18M3I12M2D13M3I40M4D89M1D45M1D32M3I19M 209/330 63.3% 342/94230402 0.0% 40/330 12.1% 12756637 NA +3181 chr4 + 190214555 62782065 62782064 62782146 82 TCCCATTTCTTCTTCTTCTTTCTTCTTCTCCTTCTTCTTCTCCTCTCCTCCTCCTCCTTCTTCTTCCTCTTCCTCTTCCTCT chr4 + 94230402 68929820 68929819 68929898 68929820 68929819 68929898 79 TTTCATCCCTTCTTCCACGGGGTTATTTCCCATTTACCCCCTC---CCTCCCCCCCCTTTTTTTTCTTCTTCCTCTTCCTCT .::...::.......:x.xxxx..x..::..x.:.x.::.::.---.....:..:....:..:...:............... 43M3D36M 54/79 68.4% 79/94230402 0.0% 3/79 3.8% -6147755 -88082647 +3400 chr4 + 190214555 62783224 62783223 62783297 74 GTGCACGTGTAGTCGCAGCTACTCAGGAGGCTGAGGCAGGAGGATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .............:x........::::........x.xx.x.:.x::........::.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -13249980 -80980422 +3369 chr4 + 190214555 62795660 62795659 62795735 76 TATACATATGTGTACATATGTGTATATATGTATATATGTA------CATATGTGTATATATGTATATATACATATATACATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x...x.....x::.:.....:.:.:.....xx.....------.......:x...:....x...::...:...:...:. 40M6I36M 56/76 73.7% 82/94230402 0.0% 6/76 7.9% -23038873 -71191529 +3133 chr4 + 190214555 62829985 62829984 62830128 144 CTTTCTTGCT---TTTCAATCTGTATATCT-------TTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTT chr4 + 94230402 63697081 63697080 63697239 63697081 63697080 63697239 159 CTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .......::.---...x...x..x:..:::-------...x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx..:..x::.:xxx....:x:.:....x:xx.:.:.:...::.:.::......::...:..:..x:.. 10M3I17M7I17M5I100M 87/144 60.4% 159/94230402 0.0% 15/144 10.4% -867096 -93363306 +3646 chr4 + 190214555 62829991 62829990 62830124 134 TGCTTTTCAATCTGTATATCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 63697106 63697105 63697239 63697106 63697105 63697239 134 TACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..::x..:x..x...x:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx..:..x::.:xxx....:x:.::...x:xx.:.:.:...::.:.::...........:..:..x:.. 134M 77/134 57.5% 134/94230402 0.0% 0/134 0.0% -867115 -93363287 +3318 chr4 + 190214555 62830009 62830008 62830120 112 TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTT chr4 + 94230402 63697128 63697127 63697239 63697128 63697127 63697239 112 TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x::.:xxx....:x:.::...x:xx.:.:.:...::.:.::..........:...:..x:.. 112M 66/112 58.9% 112/94230402 0.0% 0/112 0.0% -867119 -93363283 +3078 chr4 + 190214555 62830013 62830012 62830112 100 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx....:x:.::...x:xx::.:::...::.:.::..........:....:.x.:. 100M 59/100 59.0% 100/94230402 0.0% 0/100 0.0% -867127 -93363275 +3189 chr4 + 190214555 62830017 62830016 62830116 100 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx....:x:.::...x:xx::.:.:...::.:.::..........:....:.x:.. 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% -867123 -93363279 +3745 chr4 + 190214555 62830047 62830046 62830176 130 CTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCT-CTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT-------TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT-TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.....-------...xx:x..:::.....:....:.:x..::.:.x....xx....-.x....xxx:::..x....:.:x.xx.......:..:.....-:........:......x... 16M7D44M1D42M1I20M 84/122 68.9% 123/94230402 0.0% 9/122 7.4% -867070 -93363332 +3149 chr4 + 190214555 62830287 62830286 62830341 55 TTCTTTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCCCCTTCTCTTTTCTTG chr4 + 94230402 53459264 53459263 53459318 53459264 53459263 53459318 55 TTCTCTTTCCCTTTGCCCTCCTTTCTGCCTCTCCCTCCCCCCTTTTTTTTTCTTG ....:.:..:..:.x:.::...:...x:.....:...:......:.:........ 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 9371023 NA +3943 chr4 + 190214555 62854563 62854562 62854741 179 ATTCTATAATTAGTTTTAAAAAGTATATATATATATATATATATATATATATAT----ATATATATTTATAGAGAGAGAGAATATATATATAACATATATATAACATATATATAACATATATATAATGTATATATATAACATATATATGTA-ATGTATATATATATAACATATATGTATATGTA chr4 + 94230402 81164999 81164998 81165156 81164999 81164998 81165156 158 ACTATGTGATTAATATAATATAGCATAAAGTAATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAGTATATACGTA--------------------------CTACTTGGTATTTATAATTGGtatttatgtgtatatatatacatgtgcaatgtatgaacatatata .:.x.:.:....:.x.x.x.x..:...x.xxx.......:.x........:...----..x.....x....x.:.......:......::..--------------------------x..:x.::.:.x....xx.:::..x...:....-..:....:..:.::..::...:x::....:.. 54M4I34M26D33M1I32M 103/153 67.3% 158/94230402 0.0% 31/153 20.3% -18310436 -75919966 +5440 chr4 + 190214555 62854582 62854581 62854741 160 AAAGTATATATATATATATATATATATATATATATATATATATTTATAGAGAGAGAGAATATATATATAACATATATATAACATATATATAACATATATATAATGTATATATATAACATATATATGTAATGTATATATATATA-------ACATATATGTATATGTA chr4 + 94230402 81165025 81165024 81165178 81165025 81165024 81165178 154 AAAGTA-ATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAGTATATACGTACTACTTG--------GTATTTATAATTGGtat-ttatgtgtatatat---atacatgtgcaatgtatgaacatatatagagagacatatatatatatata ......-.......:.x........:...x:xx..x.....:.x....:........x.....::..:x..x.:--------:...x.....:xx:...-.x....:.......---...:..:..:.......:x.:.....-------........:.....:.. 6M1D67M8D17M1D14M3D26M7I17M 113/147 76.9% 154/94230402 0.0% 20/147 13.6% -18310443 -75919959 +3090 chr4 + 190214555 62854596 62854595 62854638 43 TATATATATATATATATATATATATATATTTATAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:.....:x.......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 35848600 NA +3609 chr4 + 190214555 62855923 62855922 62855999 77 GTGGTGCGCCTGTAGTACCATCTACTCAAGAGGCTGAGGTGAGTGGATCCTTTGAACCCGGAAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.x......x...x.....::.:........x:xx...:.x.x:........:....x.xx:..:..:.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -13177278 -81053124 +3001 chr4 + 190214555 62868356 62868355 62868415 60 TTAAATATAAATTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTATATTCATTC chr4 + 94230402 27540782 27540781 27540841 27540782 27540781 27540841 60 TCACACAGAAATTAAGTTTCTTTTTTTTTTTTTTTTTTGTTCTTAGCTCTGTAATTAATC .:.x.:.x.....:.:...:..................x..:..x:..:.:..x.:.x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 35327574 NA +3960 chr4 + 190214555 62870635 62870634 62870901 267 ATCCTTGACTGCCAAAGGTGTAAATGAGCATCTGAGGCTAGTGCTAATTACAGCAATCTAAAGACAGAAACTGC--TGTTGTTA-----AATCTAGGAAGCAAGTGAAATCCAGC-ATTGATTTCCAAAGTGTGTAATTTTAGAACTCCTTTCTGTGATACTA------TTTGTTTGATCTTTCCAGTGATCGTTCACATTTAAATCACCCATCT-------AAACAATTTTATTTAAAACTGTTTTTAAGGCATGTATAAATACTAATTTGTAATTAATATCAGCAT chr4 + 94230402 50054612 50054611 50054872 50054612 50054611 50054872 261 ATCTCTGTCT-CTGAAGGTGTAAATGAACATCTGGTACCAGTGATAATTGCAATGATCTAAAGTAGGTGACTGTAATTTTGTGAGGGAGAAATTATCAAGGCCCTGAAGTAGTGCTATTAATGTCTAAAAGGGGTAAATTTAGAAGTGTTCCTCATCACATGAAAAGTTTTTGTTTG-TCT-----------ATTAACTTCTGAATCAGCCATCTTACACTCATACTGTCTTCCCTGTTACTATT-----GACATGGAT---------TTAGTATTTAAAATCTGCAT ...::..x..-.::.............:......:x:.:....x.....:..:::........xx:.x:....:--.x....x.-----..x:..xx...xxxx....:.xxx..-...:..x..:...:x.x....x.......x.x:.:::::.x.:.:x.------........-...-----------:..x..x.:.:.....x......-------.x..x:.:..x::.:xx...:..-----.:....x..---------..x...x....x...x.... 10M1D63M2I8M5I26M1I47M6I8M1D3M11D23M7I23M5D9M9D20M 163/240 67.9% 261/94230402 0.0% 48/240 20.0% 12816023 NA +3533 chr4 + 190214555 62874890 62874889 62874963 74 GTGCACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAAGCAGGGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.:.........:.:.:x:xx...:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -13158314 -81072088 +3098 chr4 + 190214555 62929290 62929289 62929349 60 TCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATACACATATGTA chr4 + 94230402 85834539 85834538 85834598 85834539 85834538 85834598 60 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA .:...x...................:.xx:....x.:..:::...:..x.:....:.x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -22905249 -71325153 +3113 chr4 + 190214555 62955423 62955422 62955496 74 TGTGTGTGTGTGTGTATATACATATATACGTATACATATATACACACACACACACACATATATGTGT--AAAGGAA chr4 + 94230402 70600711 70600710 70600786 70600711 70600710 70600786 76 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGTTTTTTAAAAGGAA ......:..:x..x:..:....:x.....:..:.:.....x...::........x:::.:.:.x.x.--....... 67M2I7M 52/74 70.3% 76/94230402 0.0% 2/74 2.7% -7645288 -86585114 +3771 chr4 + 190214555 62955431 62955430 62955533 103 TGTGTGTATATACATATATACGTATACATATATACACACACACACACACATATATGTGTAAAGGAAAAAGACAT-TAAACAAACATAAATAATAAAACAATCTA chr4 + 94230402 23247723 23247722 23247817 23247723 23247722 23247817 95 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACA--------CAAGGAAAAAAGTTACATGAATAAATATATAT-ATGAAATAGCCTA .........::...:.:..x::.:x......:........:.........--------:..:.:......x:.:-.:..:...:...x..-..:...:.::... 50M8D16M1I15M1D13M 69/94 73.4% 95/94230402 0.0% 10/94 10.6% 39707708 NA +3445 chr4 + 190214555 62972764 62972763 62972858 95 CCAAGAG-GCAGAGAGAGAGAGGAAAGAGAGAGA---GGGGAAG---AGAGAGAAAGGCAAAGAGAGAAAGAAAAGAGAGGAAGAG----AGAAAGAAAGAGAAAG chr4 + 94230402 15855373 15855372 15855478 15855373 15855372 15855478 106 CCAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAG .......-:x.........::x.:.x:...:...---..:x...---..:..:.:.xx..:.......:....:.:.......:..----:.......x..:.... 7M1I26M3I7M3I39M4I16M 71/95 74.7% 106/94230402 0.0% 11/95 11.6% 47117391 NA +3569 chr4 + 190214555 62988140 62988139 62988222 83 CATGATGGCACATGCCTATAGTCTCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...::..:.--.:....::...........:........x.xx.x...x..........::.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -13045057 -81185345 +3650 chr4 + 190214555 62995976 62995975 62996106 131 AGGGAGGAAGGAAGAAGGAAGGAAGGGAG---------AGAGAGAAAGAAAGGAAGGAAGGAATAGAGGAAGAAAGAAAGGAAAG--GAAGGAAGGAAGGAAGGGAGAGAAGAAGGAAGGAAGGAAGGAAGAAAGAAAGGAA chr4 + 94230402 32265487 32265486 32265625 32265487 32265486 32265625 139 AGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGG---GAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA ....:...x.x.:.:..x.x...::....---------:...x.x:..:::..:..xxx..:---..:.:....x.x.x.x:x..--........:..:..::......:...:...:.....:.:.:..:x..x.:..:.. 29M9I24M3D20M2I55M 84/128 65.6% 139/94230402 0.0% 14/128 10.9% 30730489 NA +3323 chr4 + 190214555 62995984 62995983 62996085 102 AGGAAGAAGGAAGGAAGGGAGAGAGAGAAAGAAAGGAAGGAAGGAATAGAGG----------------AAGAAAGAAAGGAAAGGAAGGAAGGAAGGAAGGGAGAGAAGAAGGAAGGA chr4 + 94230402 57629672 57629671 57629788 57629672 57629671 57629788 117 AGCAAGAATAGTGGATGGGCG-GACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ..x.....x::x...x...x.-..x....:.....x:xxx...x.x:....:----------------..:.......x....:.:.:....:....:.::......:...::..... 21M1D30M16I50M 71/101 70.3% 117/94230402 0.0% 17/101 16.8% 5366312 NA +3006 chr4 + 190214555 62996053 62996052 62996119 67 AAGGAAGGAAGGAAGGGAGAGAAGAAGGAAGGAAGGAAGGAAGAAAGAAAGGAAGGAAAAGACCCTT chr4 + 94230402 73399985 73399984 73400051 73399985 73399984 73400051 67 AAGGTAGGAAAAAGTAGGAAAAGAAATGTAGGAAGGAGGTAAGAAAAAGAGGTGGGAAAAGAAACTT ....x.....::.:x:.::.:.::..x.x........:.x......:.:...x:........xx... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -10403932 -83826470 +3007 chr4 + 190214555 63029847 63029846 63029890 44 TGTGTGTGTGTGTATGTGTATATGTATATATAAATACACGTGTG chr4 + 94230402 79265520 79265519 79265563 79265520 79265519 79265563 44 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTG ............:......:.:xx.:......x........... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -16235673 -77994729 +3871 chr4 + 190214555 63040393 63040392 63040501 109 TTGGGTTATAATATAAATTTCTCTTGCTTCCTTCCTCCCTCCCTTCCTCTCTTCCTTCCCTCACTCCTTCCTTCTTTTCCATCTTTCTTCTTTCTTTTTTTCTTTTTCA chr4 + 94230402 53984310 53984309 53984416 53984310 53984309 53984416 107 TTGGCCTATAATACAAATCTCACCAATCTC--TACTCTGTCTCTTCCTCCTTCCTTTGTTGAGATCCTTCCTTCTATCTGTTCTTTAATCTGTTTTTTCTTCTTTTTCA ....x:.......:....:..x.:x:::..--.x...:x..:.......::.:.:..x::xx:x...........x.::xx.....xx...x.:....:.......... 30M2D77M 72/107 67.3% 107/94230402 0.0% 2/107 1.9% 9056083 NA +3119 chr4 + 190214555 63048461 63048460 63048541 81 ATACTTAAGTATAT-ATTTATACTTATGGTTATCTATGTGAGTATATATGTATGTATATATATGTGTATATATACATATATA chr4 + 94230402 65759961 65759960 65760037 65759961 65759960 65760037 77 ATACTTTGGTCTTTCATATCTACTTTAGATT-----TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ......x:..x.x.-..x.x.....xx.:..-----.........:.....:...::...:....x.:.:.........:.. 14M1I16M5D46M 58/76 76.3% 77/94230402 0.0% 6/76 7.9% -2711500 -91518902 +3364 chr4 + 190214555 63071417 63071416 63071477 61 GTGCACCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCATGAGAATTGCTTGAACACTGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.........x.::........x.x..x...x::.......x.x.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -12961787 -81268615 +7675 chr4 + 190214555 63133517 63133516 63133806 290 AATACATTATAACTTTTTAGT-TGTAAAGCAGACAACGA---------TTTAATAGAGTATAGTCATTACTGTCATTAATAAAATTGGCTTAATTGGTGGTACAGGAATTT---ATGACACACTA--AGTTCT-CATAAATTAGAAATGCAATCCTATGAATAATGTAGACATTATCCAATACT--TTCTCACTTATTTTATTCCCACAAAATTTTCTTTTTTAAAATGAAGTTAAAACTCTTTTGTTGGACTTTATAATAAGAAAATTTG-TTATTAGTAAAGTGCTATTGTAGAAATATATAATGCC chr4 + 94230402 50127642 50127641 50127936 50127642 50127641 50127936 295 AATATGTTTTTACTTTCTAACATGTAAAAAAGACCATGAAATTAATATTCAGACACAGCAGAGTAATCTTTTTCATTACTTAAATGGGCTTAATTAGAGTTACAGCAATTTTAGATAGCATACTAGCAGCACTATATAAATTAGGTACGCATTCCTATGAATAGTACAGCCATTATCCAATTCTCCTTCTTCCTAATTTCA-------------TTCTTTTTTAAAA-GAAGCTAAAGCTTTTGTCACCTGCTTAATACAAATAACATTTTCCTCTTAGGAAGGTAATAATAGAGGGATAAATTGTGCC ....::..x.x.....:..::-......:x....x.:..---------.:x:.:.x..:.x...x..:x:.x......x.x....x.........:.x.x.....x.....---..::..:....--..:x..-:.........:x.:...x...........:.::..x...........x..--....:x..x....:.-------------.............-....:....:..:..x.xx:xx:...x...xx..x..x....x-:.x....x..:..:x..x.:x..::...x..x:.... 21M1I17M9I63M3I11M2I6M1I50M2I15M13D13M1D43M1I37M 197/276 71.4% 295/94230402 0.0% 33/276 12.0% 13005875 NA +3170 chr4 + 190214555 63137666 63137665 63137732 67 CAAGACTCCATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTGTCTGTGTATATATATGTGTGT chr4 + 94230402 47557082 47557081 47557148 47557082 47557081 47557148 67 CAAAGCTTTATTTTTAAACAAAAAAGAAAAAAAAAGAAAAAGAAAGTATGTCCATCTTTATGAGTGT ...::..::..:..x...x......:.........:......:xx..x...x:..x.x....x.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 15580584 NA +3043 chr4 + 190214555 63141264 63141263 63141305 42 TCCTTTTTTTTTTTTTTTTTTTTTTTAATAATTGAGTCAGGA chr4 + 94230402 46052615 46052614 46052656 46052615 46052614 46052656 42 TCCTTTTTCTTTTTCTTTTTTTTTTTAATGATTGAAATAGGA ........:.....:..............:.....:x:.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 17088649 NA +9805 chr4 + 190214555 63170885 63170884 63171696 812 TCTTTACCATGGGAAGTAACTTT-ATAGCAGAGAACTGTAACAAACAAACAAACAGCTATAGAGAAAAGAGTGTAAAATGATGACCTATTTGGGCTACATTTTTACTACATTTTTATTCAACAGGGAACCAG-AGCAAGACATTTAAAAAATGCCTTTTAGCTGTGGAGCATGACAAACTGCTTCCCCCGTTTCCCAATCCGGTTTAATATACTGCATGTAGTTTAGGAAACAACAGGAGACAGTGAACACTGCTGA------------CACCCATATTTGTTGTGAGCTTTTAAAATCTTACAAAGTTTATAGTGTATTCCAAATGAGTCATGATGTTTATAGACATCCCACTTTACATTAAAATCAACCT----TAAAGGACTACAATTTTAATTTGTGT----TTATTTTCTAATTATTGATGCATGAATAAAACTACAGTGGTACCCATTTTCAACTAAAGATGCATAATACAACAAAATTTTCTTTTCCT-----CTATCAACTCTAAC------TGAATTAGGCAAGAGAA----ATAAAAACATATGCATATTATGAAAACGTGAT----CTTAGCAATTTCTCTGAAGTCAGGTGGAATGAATCTGCTAAATGAAAGAATGTGAACCACAGCTGCTGCCGCCAAATTGTTCTATTTAGGAGAACATAT-CTGTTTAATCTTTCATGATGTATCATGACACAAAAAGCATCTTGACATGAACTAAACTTGACATTTGCCAAATTAATTTCTCATTTTCTCTTCAGAAACAAGAAAAGCTGTTAATTTGCAGCATATTCACAACATATACTAACATTTATGTAATTATGTAACATATGGCAAATGATA chr4 + 94230402 50138642 50138641 50139411 50138642 50138641 50139411 770 TCTTTTCCATTAAAAATCATTTTTATAGCAGTGAGCTGTAACAAGCACGCA----GCTATGGAGTGAA-AGTGTGAAATGATGAGAAATTTGG---ACACTGTTA--------TCATCCAATGGGGACTCAGTGGCAGACCACTTAGAA--TGCCTCCAGAGTATGGAGCGTGACAACCGAAATATT---TTTCACAACAGACTGTAATATAAGAAATTTATTACAGATCTCAAAGGGGAATAGCCCACACCACTGATTCTGGTCCTGCCTCCCAGATATA-------CTACTCAGATAATATAAAGTC-ATAACTCCCTGTAAATTATTTATGAGCCT-------GTCCCACCTTAGATTAAAAAATATTTCTACTGGAGACTTCCGGGGTTAATATCTGTAGCCTTGTGTTTGATTTGCTGA----------AATGCACAGTTGTTTCTGTAGCCAGC--AGGAGGTATGAAGCA------TTATCTTCACATGATACTAAACAGCTGTAGGAGGCTGTGAACTGATCAGAAGCAGGACATGAAGCCACAACTAGAACACGTAGATCTAATTGTACTAAGCTACTATATACAGCTCCAGTGGAATAAATTCTTTCAGTGAAAGAACGTATGCCATGGTTGCTAAC-TAAAATGAATCTGATTA------CATAGGCTATTTAATCTTTTGAGG---ATCA----------ATCATTATAACATGAACTGAAATTGACATTCGTCAGATTAATTTTTCATTTTCTAACCAAAAGTAAAA---------AATATGCAGCATATTTGTAGTAGACAGTAATGCTTGTGTAA-TAGACAAAGTATGTTAACTAACA .....x....x::..:.x.:...-.......x..:.........:..x:..----.....:...x:..-.....:.........xxx......---...:.x...--------.:..:...::....x:...-:...::x..:...:..--.....::x::x.:......:......x.x:xx.x::---....x...:xx:x.x.......xx:x..x..x.x:..:xxx...x:..::.:..:xx....::....------------.x....x..x.:-------..x:.x.:..xx..:.....:-...::x:x:.x:....x.x.:....xx:.-------:......:...x.......xxx.::.----.::..:x:.x.::xx.....x.x...----..:.x..:x.x..::...----------..xx:.....x..x:.::.xx:..:.--.:..x.:..:.x:..------..x....:x.x.-----:x.x..:..x..:x------....:.::x..::..x.----..:..:x..:.xx:.x.x:.:.x.:.:x.:..----..x...x.:.x:x:xx.:x..x:.......:...::x:.x.:........:..:x:...::.:....:x.-:x....x:x...:x...------....x-..:..........::x.:---....----------.x...:x.:.........:..x........:.:..:........:.........xx:..:..::..:.---------...x...........:::.::.x.:.x...:::..:.....-..x::..x:....x:..x.:.:. 23M1I27M4D13M1D24M3D9M8D19M1I16M2D36M3D67M12I12M7D21M1D29M7D26M4I26M4I18M10D26M2D15M6D12M5I14M6I17M4I32M4I70M1D17M6D5M1I18M3D4M10D68M9D41M1D23M 463/728 63.6% 770/94230402 0.0% 126/728 17.3% 13032243 NA +3029 chr4 + 190214555 63173756 63173755 63173812 57 TCTATATATTATATATAGATGTATATATATATATATATATATACATCTATATATATA chr4 + 94230402 24836829 24836828 24836885 24836829 24836828 24836885 57 TCTCTGTAGTATGTATAGATGCATTTATATATATATATATACCTATCTCAATACTTA ...x.:..x...:........:..x................:x:....xx...:x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 38336927 NA +3064 chr4 + 190214555 63214928 63214927 63214972 45 GGTAGTGTGATGTCTTCATCTTTTTTTGTTTTGTTTGTTTGTTTT chr4 + 94230402 38385008 38385007 38385052 38385008 38385007 38385052 45 GGTGGTTTGTTGTTTTTATCTTTTTTTAGTTTGTTTGTTTGTTTT ...:..x..x...:..:..........:x................ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 24829920 NA +3254 chr4 + 190214555 63222025 63222024 63222097 73 TGCGCCTGTAATCCCAGCTACTCAGGAGACTGAGGCAAGAGAATCGCTTGAACCTGGGAGACTGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........::::..:.....x.xx.x...x.:........::.:..x:.x:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -12811180 -81419222 +3156 chr4 + 190214555 63228862 63228861 63228973 112 AAAATAAATAAATAAAAAAGAAGTATAATATCCCCTTAAAATAGA-------TTAAAAGTATACACACACACACACACACACACACACACACACATATATATGTATACATATATACATA chr4 + 94230402 24017381 24017380 24017498 24017381 24017380 24017498 118 AAAATAGA-AATTACATTAGAGATATTTTATTGTCAAATAATAAAGTGATCATTGAAAATAAATAAACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGAATA ......:.-..x..x.xx...::...xx...:x:.xx.x....:.-------..:...:..x.:.x...:.:..............x.x:.....:x..x.x.x:.....x...:x... 8M1D36M7I67M 76/111 68.5% 118/94230402 0.0% 8/111 7.2% 39211481 NA +15215 chr4 + 190214555 63233648 63233647 63234060 413 TTTCTTGAGAGGAATGCCAGATATTCTTCCTGCATATATCAGTGATGATGGGCTAGTC--------CGTGGCCTATCACTAGA--ATAATTTTAATTTCAAA-GCAGACTAATAGGAGTTGACTG----AAGTCTGCCTGTGCATATTCTTAAGTGATAATAAGTATAGAATTATTCATTTGTAGAGGCTTATGTCATAAGCTTA--CTGTCTAAATGATGAATACATAATTAAATTAAACAGAATTGAGACAGATGGTTCTAGCTTTTGATAAATGTTCATATCTTCATAATCAGATAATAAGTCTGCTGCCTGGAAGATCAGTTGGGATATAATAACTTTGAAAACT-AAATCATTTCATTGTTTGGCATTTATGAGACATGGTAAAAAGCAAATTCCATTTTAATTTACTTAAAATATTGCTTATTGT chr4 + 94230402 50165325 50165324 50165754 50165325 50165324 50165754 430 TTTCTTAGGAAAGAAGCTGGTGCCTTTATATTTACATAGCATTGCTGCCTGATTATTCAGAAGCTCTGAGGCTTATCCCAAGATGATGATTTTTACATCAAAAGTAGATTAATGGAAGTCGACAGCCTCATGTCCATCCAAACGCAGTGTGAAGTGATAATAAGTATAGAACTGCTAGTCAGTAGGGTCCCATGTCACATACTCAGACTAGATAAATGATGAATATGTAATGAAATTACATAGAATTGAGACAGATGGCTCTAGCTTTTGATAAATGCATATATCTTCACAATCAGATAATAAAGCCAATGCGCGGAAGATCAATTGGGATATAACAACTTTGAAAACGAAAATCATTTTTCTGCTTTCACTTTAAGATGCGCATT-TAAATCAGAATCAATCttaatttaattataatttttttCATCAT ......::..:::.x..::.xxx:.:.x:x.x:.:...x..x..x..x:x.::..x..--------:.x...:....x.x...--..:.....x.:x.....-.:...:....:.:...:...x.----.x...:::.::x:.::.x.x.x....................:.::.x:.:x....:.x.::......:.x:..:.--..:xx.............::....x......x.:.................:..................:x:.........:.............:x.::x...x:.........:...........:............x-.........:x:..:..xxxx....x..x:.:::x.-x...x..:.x..x..:........x...x...x..x:.:..::. 58M8I17M2I17M1I22M4I76M2I142M1I36M1D44M 289/412 70.1% 430/94230402 0.0% 19/412 4.6% 13068323 NA +3074 chr4 + 190214555 63323469 63323468 63323521 53 CTACATTTGTAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGT chr4 + 94230402 37981906 37981905 37981958 37981906 37981905 37981958 53 CTATCTTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGT ...:x.....x....x.x...xxx...x.....:................... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 25341563 NA +3121 chr4 + 190214555 63333500 63333499 63333594 95 CCAAAAGTCCTTTGGCAGATTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTTACTTACCTAGTGAGTCAAAAG chr4 + 94230402 21345681 21345680 21345775 21345681 21345680 21345775 95 CCATAATTCTCTTCTTCATTCCCACACCAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGACAAGACTGTCTGGTACCCACTGAATCGTAGG ...x..x..::..xx:x:x.:.:...xx.:.........:..........:...::..:.:::.x..:.:...:xxx....:.x...:..:x.:. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 41987819 NA +3510 chr4 + 190214555 63349303 63349302 63349409 107 GGAGTGCGCTGCCGAGAGGAT--TGGGCCGG--CAGGCGTTCGGTTCCGGGAGGGGGCGGCACGCCGGGAACTGGGCGGCCTAGGCTGGCTGGTTGTGGCGGTGACGGCGG chr4 + 94230402 79380504 79380503 79380611 79380504 79380503 79380611 108 GGGGCGCGCTCCGGAGCGGGTGCCAGGCCGGGCCGTGCCTGCGGAGC---GAGCGAGCGGCGGGCTGTGAGCGGAGCGGCCTGGGCTGACGGGTTGTGGCAGCGGCCGAGG ..:.:.....x.x...x..:.--::......--.:x..x.x...xx.---...x.:.....:x..:.x..:.x.:.......:.....:.x.........:.:.:.x.x.. 21M2I8M2I14M3D61M 73/104 70.2% 108/94230402 0.0% 7/104 6.7% -16031201 -78199201 +8349 chr4 + 190214555 63350489 63350488 63350635 147 TGGTTATCAAGAAC---ATGGTGAAAGGACTTTTCAGCCATTTCAAACAGAACTTAATACCAGTATGATGTATTACTATGATGATGGTACAGGGGTACAGGTGTATCGTGTGGAAGAAGCATTGCTTAAAGAGTGTATTAAGCGTCAAAT chr4 + 94230402 35549095 35549094 35549244 35549095 35549094 35549244 150 TGGTTATCAAGAACTGTATGGTGAAATAACTGACCAAGCATTTCAACCTGAGCTTAACTCTAGTATGATGTATTACTACGATGATGGAACAGGAGTGCAGATGTATTCTGTGGATGAAGTTCTTCTGAAAGAATATATAAAACGTCAAAT ..............---.........x:...xx:..:x........x.x..:.....:x.:.................:........x.....:..:...:.....:x......x....:x:.x..x.....:.:...x..:........ 14M3I133M 117/147 79.6% 150/94230402 0.0% 3/147 2.0% 27801394 NA +8510 chr4 + 190214555 63350763 63350762 63350941 179 CTTATCACAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTATGAATGAGAAAATGAGAAAAAAG----AACCAGAAAAATGGCCAATTCCAGGCCCTCCTCCATGCAACGTACCACAAACAGACTTCTCTCAACT----GATTGTCCAGAGTTTGTACCAGGCTAAGCCTTTTGCTCGCATACAG chr4 + 94230402 35556419 35556418 35556605 35556419 35556418 35556605 187 CTTGTCCAACAGGCCCTAAAGGACAGTACAGAAGTTGAAACTGTGGATCAGAGGATAAGAAATATGGTTGATCCAGAAAAGTGGCCGATTCCAGGTCCACCTCCCTGTAATCTGTCAAGGACTGACTTTTCTCAGCTCATCAATTGTCCAGAATTCATACCAGGGCAAGTTTACGGCTCACATACAG ...:..xx.x....x..:.....:..:........x....:.:..:..x...::..:.....x.x.----.x........:.....:........:..x.....x..:..:x.::..x::..x.....:.....:..----:..........:..::.......x:...::.x:x....:....... 66M4I67M4I46M 132/179 73.7% 187/94230402 0.0% 8/179 4.5% 27794344 NA +9411 chr4 + 190214555 63350940 63350939 63351117 178 AGAGTCTGCCCCAAATTCCCCAAGAATTGGAAGCCCATTGACTCCAAAGAAAAATAGTGAAACAAGTATTCTTCAAGCAATGTCTAGAGATTTGCC----AGTTTGCCTGACTTGGACTCAGAACCTGGGATGGAAGTAAAAAAGAGACATCAGCCAGCCCCAGTGAAATTGAGGG---AATGAG chr4 + 94230402 35557646 35557645 35557830 35557646 35557645 35557830 185 AGAGTCTGCACCAAGTTCTCCAGGAATGGGAAGCCTGTTGAGTCTGAAGGAAAACACTGAAACAAGTAATTTTCAGACAATATCTAAAGGGTTGTCTACAAGTTTGCCTGATTTGGACTCCGAACCTTGGATAGAAGTGAAGAACAGGCATCATGCATCCACTGTCAGAGTAAAGGTAAAATGAG .........x....:...:...:....x.......::....x..::...:....:.x...........x.:....::....:....:..:x...:.----...........:........x......x....:.....:..:..x..:.....xx..x..x.x..x.:.x.:.:..---...... 96M4I76M3I6M 138/178 77.5% 185/94230402 0.0% 7/178 3.9% 27793294 NA +17774 chr4 + 190214555 63351110 63351109 63351476 367 GGAATGAGTGTCTGTTCCTGAG--------GGGTCATTAAATCAGCTATGTTC---TTCAGAAGAAACAGAACAAGAAGAACTTGA-TTTTTGTTTGATGAAAAGACTGAACAAAT--AGGATGA-AAAAACACATTAACTGATTGGTCTGATAATGATTCAGATTATGAAATTGATGACCAAGACTTAAACAAGATTTTGATTGTAACTCAGACACCACCTTATGTGAAAAAACATCCTGGAGGAGATTGAAGAGGCAACCACATGTCTCAGGCAAAAATCACATCTGAACTTACTAAAGTTATCAATGATGGTTTATATTATTAGGAACAGGATCTATGGATGGAAAAAGATGAAAACAAACATACAGCTGTAAAGGTGA chr4 + 94230402 35558302 35558301 35558678 35558302 35558301 35558678 377 GGAATGCGTTCCTATACCTGATCAAGTGTCAGGTCAACAA--CAGCCACCTCCACCTCCAGAGGAACAAGAACAAGAAGAACTTGACTTTTTGTTTGATGAAGAGATGGAACAAATTCAGGGTCATAAGAATAAATTCACTGATTGGTCAGACAGCAGTTCAGATTATGAAATTGATGATCAGGATGTAAACAAGATTTTGATTGTAACACAGACGCCACCATATATGAGAAAACATCCTGGTGAAGATCGTGCTGGCAACCATGTGTGTCATGGAAAAATAACATCGGAACTTAAAAAAGTTATTAATGATGGCTTATACTATTATGAACAGGATTTGTGGACAATGCAGAGTGAAAATGACCCTCCA---GTAATGGTAA ......x..x:..:.x.....x--------:.....x:..--....:.:x.:.---.:....:...xx..................-...............:...:x........--...:.x.-..:..:.x...x...........x..:.::::.....................:..:..:x......................x.....:.....x...:...:............x.:....:.x:xx........::...x...x.x......x.....x.......xx........:........:.....:.....x.........:.:....:::x:x.:::......::.x.x.x..---....x...:. 22M8I10M2D11M3I30M1I29M2I7M1I243M3D10M 283/362 78.2% 377/94230402 0.0% 20/362 5.5% 27792808 NA +3145 chr4 + 190214555 63351625 63351624 63351719 95 TTCATGTTTTTGAAAAGAATGAAGATATTTTTAAAAGTTTCAACAATTTTTCAATTTTATCATTAGATGTTTCATATTTTATATTTTATTTTATT chr4 + 94230402 63455943 63455942 63456037 63455943 63455942 63456037 95 TTCATATTTTAGAAAAGTCCAAGGGGATTTTTAATAGAATTTCCAATATCTGAAATACAACGTGAGCTCTTTAACATTTTAAATCATATTTTATT .....:....x......xx::.:.:x........x..xx.:xx....x.:.x..x.x:.x.:.x..x.x...x.:......x..:x......... 95M 64/95 67.4% 95/94230402 0.0% 0/95 0.0% -104318 -94126084 +3025 chr4 + 190214555 63413411 63413410 63413445 35 ATATATATATATATTTTGTTGTTGTTGTTGTTGTT chr4 + 94230402 77305229 77305228 77305263 77305229 77305228 77305263 35 ATATATATATATATTTTTTTGTTGTTGTTGTTGTT .................x................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -13891818 -80338584 +3036 chr4 + 190214555 63417612 63417611 63417651 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 59008530 NA +3260 chr4 + 190214555 63417618 63417617 63417697 80 TATATATATATATACACACACACACACACACACACACATACACACACACATATATATACACACACACATATATATATAGC chr4 + 94230402 74526053 74526052 74526132 74526053 74526052 74526132 80 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGC .:..x..xx.x.x....xx.x.:x...............:x...:.....x........::.:.:.::...x..x..x.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% -11108435 -83121967 +3391 chr4 + 190214555 63437805 63437804 63437878 74 TTTTTGTTGTTGTTGTTTGTTTTGTTTTGTTTCTTAGAATTGTTTTGGATATTTGGGATATTTGGGATCTTTTT chr4 + 94230402 63215019 63215018 63215091 63215019 63215018 63215091 73 TTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTTTTAGGA-TGATTTGGATTTATCAGACTTTTTATTTCATTTT ..x..x..........................:....:.-..x.......x.x.x:..:x...x:xx..x.... 39M1D34M 57/73 78.1% 73/94230402 0.0% 1/73 1.4% 222786 NA +3720 chr4 + 190214555 63448249 63448248 63448401 153 TTTCCTTCCTTTCCTTCATTTGCTTCCTTTC---CTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCT chr4 + 94230402 50176282 50176281 50176425 50176282 50176281 50176425 144 TCTCCTTTCTT-CCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTT------TTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTG-----TCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCT .:.....:...-....:..::..::x....:---:.x:.......x......x.x..:x...------..x.:.............:xxxx.::x.:.:.::x:......x-----.:..:......:....:..:.:.x.....:x:x.x..:.. 11M1D19M3I28M6D43M5D40M 94/141 66.7% 144/94230402 0.0% 15/141 10.6% 13271967 NA +3002 chr4 + 190214555 63448272 63448271 63448366 95 TTCCTTTCCTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .......x:.:x:.x.::..x.......xx::.::.:.:.:.:.....:x..:xx:...x.::..x:x.:.....x.....::..::.:...... 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% -19878662 -74351740 +3552 chr4 + 190214555 63448283 63448282 63448366 84 CTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...........x::.:.x:::..:....::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 6076257 NA +4471 chr4 + 190214555 63448285 63448284 63448413 129 CTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTTCTTC chr4 + 94230402 50176281 50176280 50176415 50176281 50176280 50176415 135 CTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC ..:..:......:..:.x..:x:.:x::...x:x..x..::..::x......x.-...x..:..x::.............:-----.:x:..::..x.......x:..:...::.....:....:.:.x...... 54M1I26M5I49M 86/129 66.7% 135/94230402 0.0% 6/129 4.7% 13272004 NA +3611 chr4 + 190214555 63448300 63448299 63448409 110 CTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTTT----CCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx:x..:.:.....:....:.:x..::.:.x....xx.....---------....x:..:..:----:....:...::...::.........::..:...x... 61M9I12M4I37M 73/110 66.4% 123/94230402 0.0% 13/110 11.8% -248817 -93981585 +3304 chr4 + 190214555 63448302 63448301 63448435 134 TTCTTTCTTTCTTTC--TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTC--TTTCTTTCTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTTCTTCTCTTTCTTTCTTTCTTTTCTTG chr4 + 94230402 6297115 6297114 6297252 6297115 6297114 6297252 138 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTT--TTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTG .....:..x.x..::--........x:...x.x.x....:.x..::..--:.:x......--:x.....x.:......:x..x....:.:x....--....:x.x.xx......x:x..xx:.:...:...:....x... 15M2I31M2I10M2I33M2D43M 90/132 68.2% 138/94230402 0.0% 8/132 6.1% 57151187 NA +4103 chr4 + 190214555 63448304 63448303 63448422 119 CTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTTCTTCTCTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTC--ACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x.......--x.xx.......:..:.::::...........::...:x.. 65M5I12M2D40M 80/117 68.4% 122/94230402 0.0% 7/117 6.0% -248813 -93981589 +3013 chr4 + 190214555 63448357 63448356 63448417 61 CTTTCTTTCTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTTCTTCTCTT chr4 + 94230402 89601114 89601113 89601174 89601114 89601113 89601174 61 CTTTCTCTCTTTCTCTCCTTTCCCTTTTCTTTACTCTTTCTCCCCCAACCTTGAGGCTCTT ......:.......:......::....:...:x:........:.:.xx:...xxxx..... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -26152757 -68077645 +3155 chr4 + 190214555 63449661 63449660 63449701 41 AGTGGATATATATATATACACACACACACACACACACACAC chr4 + 94230402 64906710 64906709 64906750 64906710 64906709 64906750 41 AGTGGATATGTATATATGAACGTACACACACACACACACAC .........:.......:x..::.................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -1457049 -92773353 +3612 chr4 + 190214555 63449692 63449691 63449752 61 ACACACACACACACACACACACACATATATACACACACATATATACGTATATATGTACGTA chr4 + 94230402 74526066 74526065 74526126 74526066 74526065 74526126 61 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ....xx.x.:x...............:x.:.:.....x...................:x.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% -11076374 -83154028 +3269 chr4 + 190214555 63478679 63478678 63478742 64 AAACCCCGTCTTTACTAAACAAACAAACAAACAAACAAACAAACAAAAAACAAAAAAAAATAGC chr4 + 94230402 22620539 22620538 22620602 22620539 22620538 22620602 64 AAACACTGTTGATATTGTCTAAAGGAAAAAACAAACAAACAAACAAGAAACAACAAAAAACAGC ....x.:..:xx..:.:xx:...x:..x..................:......x......:... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 40858140 NA +3046 chr4 + 190214555 63486784 63486783 63486835 52 AATAGATTGTTTCAAATACATATATATATATATATATATATACACACACTCA chr4 + 94230402 54005673 54005672 54005724 54005673 54005672 54005724 52 AACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACA ..:.:...:.x.::..:......:...x........:...:........x.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 9481111 NA +3049 chr4 + 190214555 63498850 63498849 63498908 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAATCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx::x....:....:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -12534356 -81696046 +3508 chr4 + 190214555 63529350 63529349 63529456 107 ATGTGTGTGTGTGTATATATATATATATATACATATATGTATATATAAATATATATATATATATAATTAGTCCATTTTCACACTGCTCTAAAGAACTACCTGAGAAA chr4 + 94230402 46063299 46063298 46063405 46063299 46063298 46063405 107 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCTCAACAGAACTAGCAAAGAAA ..:::.....:::.:.:...:x::.:..:.x...:.....x......x......:xxx.......xxx:..x..x.x::.:x:.....x.x.......x.x:..... 107M 68/107 63.6% 107/94230402 0.0% 0/107 0.0% 17466051 NA +3050 chr4 + 190214555 63545719 63545718 63545770 52 AACTTAAAGTATAATAAAAAAATAAAAACAAAACAAACAAACAAACAAAACC chr4 + 94230402 42271789 42271788 42271840 42271789 42271788 42271840 52 AACTTTAAAGATAGTAAACAAATTCAAATTAAACAAACAGACAAACAAAACC .....x..:x...:....x....xx...:x.........:............ 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 21273930 NA +3135 chr4 + 190214555 63564936 63564935 63565026 91 TAATAAACTCATATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATACTGTCATTTCTATTCCTA chr4 + 94230402 65285557 65285556 65285647 65285557 65285556 65285647 91 TAATTAGGTGAAATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCTA ....x.:x.x.x....:.xx..:.xx.xx...x..:.......:....x.........x.:.:.:.x....x.x...:...x:.x..:... 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% -1720621 -92509781 +3314 chr4 + 190214555 63597789 63597788 63597867 79 GTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGGCAGAGGTTTCGG chr4 + 94230402 76033201 76033200 76033270 76033201 76033200 76033270 70 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC-------CAGAAGCTTTGG .........:--......:.........:.::........x.xx.x...x::........-------....:.:..:.. 10M2D48M7D12M 55/70 78.6% 70/94230402 0.0% 9/70 12.9% -12435412 -81794990 +3021 chr4 + 190214555 63629919 63629918 63629969 51 ATATATATATACACACACACATATATATACACATATATATACATATATACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:......x.x..:...:.:....:.:........x.:x.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 17489063 NA +3072 chr4 + 190214555 63629923 63629922 63629975 53 ATATATACACACACACATATATATACACATATATATACATATATACACATATA chr4 + 94230402 74526074 74526073 74526126 74526074 74526073 74526126 53 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..x:.:............:x.:.......x........:......:::..x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -10896151 -83334251 +3023 chr4 + 190214555 63629937 63629936 63630007 71 ACATATATATACACATATATATACATATATACACATATATACACATATATATACATATATACACATACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...:.:....x.....::.x.:....::.....x.x....::.:..x.:.:.:::.....:..:::..:.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 41029739 NA +3212 chr4 + 190214555 63629946 63629945 63630021 76 TACACATATATATACATATATACACATATATACACATATATATACATATATACACATACATATACATATATACACA chr4 + 94230402 25906384 25906383 25906459 25906384 25906383 25906459 76 TACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA ....:..x.:.x.:....:..::.x.::.::....x.x...x:.:.....x......:.x........xx...:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 37723562 NA +3115 chr4 + 190214555 63643263 63643262 63643335 73 TTATATATGTATGTGTTTGTATGTGTGTGTGTGTATATGTGTGTGTATATATATATATATATATATATATATA chr4 + 94230402 85834532 85834531 85834604 85834532 85834531 85834604 73 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA ....x:..x.:...x.x...:...........:.xx....:x.::..:....:..x...:..:.x...::.:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -22191269 -72039133 +3453 chr4 + 190214555 63643263 63643262 63643335 73 TTATATATGTATGTGTTTGTATGTGTGTGTGTGTATATGTGTGTGTATATATATATATATATATATATATATA chr4 + 94230402 85834530 85834529 85834602 85834530 85834529 85834602 73 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ..x...x::.x.....:...:...............xx:...:x.:...:....:..x...:..:.x...::. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -22191267 -72039135 +3069 chr4 + 190214555 63643267 63643266 63643334 68 ATATGTATGTGTTTGTATGTGTGTGTGTGTATATGTGTGTGTATATATATATATATATATATATATAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:x.::..:..x:...x..:.:...x......::..:....:......:..x.:...::..x.:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -22990656 -71239746 +3213 chr4 + 190214555 63643287 63643286 63643339 53 GTGTGTGTGTATATGTGTGTGTATATATATATATATATATATATATATAATTT chr4 + 94230402 55892185 55892184 55892237 55892185 55892184 55892237 53 GTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATAAAACTT ......x.......x.....x......:....x...:..:...:...x..:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 7751102 NA +5561 chr4 + 190214555 63645233 63645232 63645422 190 AGCCTGTGATTCTTAAAAAATTGTTTGTTACCCTCTAAACCTCT-----AAACTGTACTCATGC----------------TAAAAACATATGGGTTTTATTAAGG--GAATTTTTTTCTTAATTATTCTAAGAAATTGCCAATTAAAATGTAATTATAGGA-TGTTTAAAATGAATTGTCTCAAAGGAATATCCAGATGGCCATGAGAAATAGC chr4 + 94230402 50322060 50322059 50322271 50322060 50322059 50322271 212 AGCTTGGGATT--TAGCAGGTTGCTTGTGACCATCCACAGCTTTTGCATATGCCTTGTCCATACGTGGCCTGCATGTCCATGGGCACAGATGGGGCTGGCAGAGGCAAAACATTTCTTTTAATCTTTCTAAGAAATTACGAATTAAGATGTGATTATGGAACTGTTAAAAAGGAATTACCACAGAGGAATTTCCAGATGGTCCTGCAGAATAAC ...:..x....--..:x.::...:....x...x..:.x.x..:.-----.x:.:x.:::...:.----------------.:::x...x.....x:.x::x:...--:..:x...:.:.....:x............:.x......:....:.....:.:.-....x....x.....::.x..:......x.........:.x..x::....:. 11M2D31M5I15M16I25M2I54M1I52M 129/188 68.6% 212/94230402 0.0% 26/188 13.8% 13323173 NA +3197 chr4 + 190214555 63652173 63652172 63652213 41 TCTGGGTTTTTTTGTGTGTGTTTTGTTTTGTTTTTGTTTTT chr4 + 94230402 12176242 12176241 12176282 12176242 12176241 12176282 41 TCTGGGTTTTTTTGTGTGTGTTTTTTGTTGTTTTTTTTTTT ........................x.x........x..... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 51475931 NA +10667 chr4 + 190214555 63678567 63678566 63678943 377 CTCATATAATTCGTGTTCAAATTGTAAAAATGACCTCAAAGGTACAGAATTATTGTGTGATTCTTCCACCTTTGAAGTCATTACTGCTTAATTTTTCACTGTTGCCTAAGTGCCACAGAAACATTAGTAGTGGAT--TTATGG-TTACTAATAGGGTACTTAAAGTCCAAATGTAAAGACCTCATCAAACTCTTGGTATTTGCATATACAGTGCAGATAATTAAGTGGCT--GATTGGCAATGCTTCCTCCTTGCTGCCGTTGGGGTATTCAAAGATGACAGGCTATTTAAAATAATATGTTTCTCAGAATTAACTCTGTGTTAAGAATGTCCAGGCCT----ATATATTTCAGGGTTTATGGAACTTCATTTGCAATACTGCTGT chr4 + 94230402 50362900 50362899 50363278 50362900 50362899 50363278 379 CTTCCATCACTTATATTCAAATGGTATGGATGACCTGTGAAGTGTCTACTCATTTTATGGATATCCCACCTTAGATGTCATTAGTGCCTAATTTT-CACTGCAGCTTGCAC-TCAAGGCAGTGTTGGTAGTGGCTCATCATGAATTACTGATGTGGTGCTCAGAGGTGAAAAGTCAAGACCCCATCAAATTCTGGATATTTGTGTATACAGTATAGATAATTAAGTATCCAAGGCAGGTATTTCTTTCTCAACTTTGCTGTTAGGGTATTCAATG--GAAAGTCCATTTAGTATCTTATGCTGCTGAGGATTAACCTTTAATGATACATGCCC---TCTAATGATATATCATACGCTGCATTAATCCTAATCTGCAAAGCAGCTGT ..:x:..x.:.::.:.......x...x::.......xx:.:..::xx.x.:...x.:..:x.x.:.......x..x.......x...:.......-.....:x..:.:x::-:..x:.x.:::..:.......x.--.:...:-.....:..:x...:..:.:..x:x...x..x......:.......:...x.:......::........::............:x.:--.::x..:.x.x...:...xx:x:...:...:..........x.--..x..x.:.....:x..xx....:.x..x..:......::.xx:.x.x:x...:..---:..----......:x:.x.x.x:..x:.x.:.x..:.....x:.x..... 95M1D15M1D23M2I6M1I86M2I43M2D56M3D3M4I43M 245/370 66.2% 379/94230402 0.0% 16/370 4.3% 13315667 NA +3416 chr4 + 190214555 63705658 63705657 63705744 87 ATATATATATACACACACACACACATATATATACACACACATATACACACACATACACATATGTATACATATATACACATGTGTGTG chr4 + 94230402 23247722 23247721 23247807 23247722 23247721 23247807 86 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-TACATGAATAAATATATATATG ..:.:.:...:........:x:.::x.:....::.........:.........x:x.x.x.x..-.....:x...x.:..:.:.:.. 64M1D22M 59/86 68.6% 86/94230402 0.0% 1/86 1.2% 40457936 NA +3151 chr4 + 190214555 63705659 63705658 63705725 67 TATATATATACACACACACACACATATATATACACACACATATACACACACATACACATATGTATAC chr4 + 94230402 54963195 54963194 54963261 54963195 54963194 54963261 67 TATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .....x:.....x.::.....x:.....:.:.......xx:.::::.:.x........:..x..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 8742464 NA +3983 chr4 + 190214555 63705662 63705661 63705764 103 ATATATACACACACACACACATATATATACACACACATATACA------------CACACATACACATATGTATACATAT-ATACACATGTGTGTGTGTGTGTATATATATATATA chr4 + 94230402 72529188 72529187 72529302 72529188 72529187 72529302 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x:.....:.:...:.:.:....x.x..:.:x..::....x.------------..xx...x.....x.:.-.....x.-......:...............:..:......... 43M12I17M1D7M1I35M 78/102 76.5% 115/94230402 0.0% 14/102 13.7% -8823526 -85406876 +3983 chr4 + 190214555 63705662 63705661 63705764 103 ATATATACACACACACACACATATATATACACACACATATACA------------CACACATACACATATGTATACATAT-ATACACATGTGTGTGTGTGTGTATATATATATATA chr4 + 94230402 72525615 72525614 72525729 72525615 72525614 72525729 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x:.....:.:...:.:.:....x.x..:.:x..::....x.------------..xx...x.....x.:.-.....x.-......:...............:..:......... 43M12I17M1D7M1I35M 78/102 76.5% 115/94230402 0.0% 14/102 13.7% -8819953 -85410449 +3318 chr4 + 190214555 63705719 63705718 63705777 59 TGTATACATATATACACATGTGTGTGTGTGTGT----ATATATATATATATATATGTTTGGGA chr4 + 94230402 55694454 55694453 55694516 55694454 55694453 55694516 63 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATATTGTTGAGA .....:....:..............:.....:.----..:..::.:.:.......xx...:.. 33M4I26M 47/59 79.7% 63/94230402 0.0% 4/59 6.8% 8011265 NA +3742 chr4 + 190214555 63706941 63706940 63707030 90 GTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCACCTGAACCCAGGAGGCAGAGGTTGCTGTGAGCCATGAT chr4 + 94230402 76033201 76033200 76033285 76033201 76033200 76033285 85 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG---GCTGTAGAACATGAT .........:--....:.:...........::........x.xx.x...x...:.........:..x:xx:.---.....:::x...... 10M2D60M3D15M 64/85 75.3% 85/94230402 0.0% 5/85 5.9% -12326260 -81904142 +3224 chr4 + 190214555 63730180 63730179 63730230 51 CAGTAAAGCTTTTGGAAGTTTTTATTTTTCTTGTTCTTTTTTTTTTTTTTT chr4 + 94230402 48635080 48635079 48635130 48635080 48635079 48635130 51 CAGTGCAGCATTTGGGAGCTTTTATTTTTCTCCTTTTTTTTTTTTTCTTCT ....:x...x.....:..:............:x..:..........:..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 15095100 NA +3993 chr4 + 190214555 63745979 63745978 63746051 73 TGCACCTGTAATCCCAGCTACTCGGGAAGCTGAGGCATGAGAATCACTTGAACCCAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:.::.:......x.x..x...x.............:..x.xx:..:..:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% -12287226 -81943176 +3054 chr4 + 190214555 63766896 63766895 63766956 61 TTCTTCTTCCCTTGGATAATTCTTGTTTTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTCAG chr4 + 94230402 73788913 73788912 73788973 73788913 73788912 73788973 61 TTCTTTTATACTTAAGTATTTCTTGCATGTTTTTTGTTTGTTTGTTTGTTTAAATTTCTAG .....:.x:x...:::..x......:x.x......................xx:...::.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -10022017 -84208385 +3054 chr4 + 190214555 63780999 63780998 63781161 163 TTTTGTTTATGCAGGTTTGTTTCTTGTTACCTTCTCTCTTAAATTTCTTTTCTTTTTTTTTTCTCTTTTTTTTTTTTGAGACA----GAGTCTGGGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCTGCTCACTGCAAGCTCCGCCTCCTGGGTTCACG chr4 + 94230402 68890625 68890624 68890783 68890625 68890624 68890783 159 TCTCATTTTCACATTTTTGTTTCCTGGTCTCATTTTCTATGAATTGCTTTTTTTTTTTTTTTCTTTTACTTTATCTTATTTCACTGCTAGCCATGGTCCCTAGCTACATGGTTGCA---CAGTGGA-----CTCTGTTTACTGCCAGACCAGCATACAGTGTGCGTG .:.::...x::..xx........:..x.x:.x.:.:::x.:....x.....:............:..x:...x.:..:xxx..----x..:.xx..x.:..:x.xx.xx..:..x.---......x-----.....:.:.....x..x:.x..x.x.x.x..x.::. 83M4I29M3D7M5D36M 97/155 62.6% 159/94230402 0.0% 12/155 7.7% -5109626 -89120776 +3015 chr4 + 190214555 63802207 63802206 63802267 61 TGCTTTATTTATATGGTAATTATGTTGCAATAGTATTAACATTTAAAATATATATATATAT chr4 + 94230402 66456829 66456828 66456889 66456829 66456828 66456889 61 TGCTTTGTTCATGCAGTGCCTGTGGTGAAAGAATATTACTATTCAATATATATATATATAT ......:..:..:::..:x:.:..x..x..x.:.....x:...:..x.............. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -2654622 -91575780 +3856 chr4 + 190214555 63818247 63818246 63818338 92 CGTGGTGGCACATGCATGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033197 76033196 76033291 76033197 76033196 76033291 95 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG .:::....::..:.--....:.:............:........x.xx.x...x.............:..x.xx:..:..:.----....-...... 14M2D66M4I4M1I6M 69/90 76.7% 95/94230402 0.0% 7/90 7.8% -12214950 -82015452 +4368 chr4 + 190214555 63849016 63849015 63849188 173 ATAATATTATTATATTGTAT-TATATAGAAATATATTATATATAATATAATATAAAATATTACATTATACATTATATGTTATCTTTATACTATGCACTATATAATATATATGTTATAT--ATTACATAATATATTATATAATCTATT--ATATTATCT-ATTATATAAT-CTATTATATA chr4 + 94230402 73633758 73633757 73633928 73633758 73633757 73633928 171 ATGGCAATATCACATTGTAGAGATATAAGACAACATCAAATAT---------TAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaattattaaatattatttCACGTTATAATGTTATGATATA ..:::.x...:.:......x-x.....::.xx.:..:.x....---------....x.x...x...:...x......:x:....x:...:...:..x......x..........x...--.x..:x.:x.x...x...:..x:....--.......:.-.:xx......-:...x..... 20M1I22M9D66M2I27M2I9M1I10M1I10M 118/164 72.0% 171/94230402 0.0% 16/164 9.8% -9784742 -84445660 +3390 chr4 + 190214555 63849791 63849790 63849900 110 TTATTATATTATATATTATTATACAATATATTATATATAATACATAATATTATATATTATATTTTATATAATATATAATATATAATATATAATATTATATTATATATAAT chr4 + 94230402 7876199 7876198 7876308 7876199 7876198 7876308 110 TTATTAAATTTTATGCCATTATTCAATATATATCTTATAATCCATTACACTGAATATTATCACCAAGTTATTATTTTAAATATTACCTAAAATATTGGATTCTTTTTAAT ......x...x...:::.....x........xx:x......x...x.:.:.:x.......xx::x.xx..x...x.x.x....x.:x..x......:x...x.x.x.... 110M 74/110 67.3% 110/94230402 0.0% 0/110 0.0% 55973592 NA +3435 chr4 + 190214555 63860120 63860119 63860235 116 TACTATATATGTA----TTATACATATACTAT-AAATATAATAAAATTCTATATATATTTATATATAATATATAATGTATATATATTATATATACATTATATATAATATATAAATATAATA chr4 + 94230402 32046733 32046732 32046851 32046733 32046732 32046851 119 TGCTATAAAAGTACAAATTATAATTATATTATTGAACATCATGTA--TGTATACACACTATTATGTAATATATAATATATGTATAATGCATATAAATTCTAACAAATGTATTTGTGTAATA .:.....x.x...----.....xx....:...-:..:..x..:x.--.x....:.:.:.xx...:...........:...:....x.::.....x...x..xxx...:...xx:.:..... 13M4I15M1I12M2D74M 81/114 71.1% 119/94230402 0.0% 7/114 6.1% 31813387 NA +3381 chr4 + 190214555 63877218 63877217 63877324 107 AATGACT-TTACAAGGATTGGAAGGACTCACCAAGTGCTAAAAGCAAAAAAAAAAAAAAAAAAAAA-AAAAAAAAGAGAGAGAGAGAAAGACACACATATATGAAAACA chr4 + 94230402 25783160 25783159 25783253 25783160 25783159 25783253 94 AATGGCTACTACAAAGAGTAGAAGAATT---------------GTAAAAAAGATAAAGAGAAAAGATAAAAAATGGGGAAAGAGAGGCAGACAGACAGATATATAAACA ....:..-:.....:..x.:....:.:.---------------.:......:.x...:.:....:.-......x:.:..:......:x.....x...x....:x..... 7M1I20M15D23M1I42M 69/92 75.0% 94/94230402 0.0% 17/92 18.5% 38094058 NA +3014 chr4 + 190214555 63877220 63877219 63877310 91 TGACTTTACAAGGATTGGAAGGACTCACCAAGTGCTAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGACACA chr4 + 94230402 75300406 75300405 75300495 75300406 75300405 75300495 90 TAACGTTACAGAATTTACAAGCA-GCAGCTACTTCTGAGATAAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCA .:..x.....:::x..:x...x.-x..x.x.x.x..:.:.xx..x:::.xx..................:.............:.:.:x.. 23M1D67M 61/90 67.8% 90/94230402 0.0% 1/90 1.1% -11423186 -82807216 +3219 chr4 + 190214555 63877264 63877263 63877319 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGACACACATATATGA chr4 + 94230402 46760561 46760560 46760616 46760561 46760560 46760616 56 AAAAATAAGAAAGGGGGGGAAAAAAAAGAGAGAAAGAGAAAAATATATATATATAA .....x..:...:::::::..............:.......:.:.:.:......:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 17116703 NA +3086 chr4 + 190214555 63877269 63877268 63877304 36 AAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:.:............... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -11423187 -82807215 +3040 chr4 + 190214555 63877271 63877270 63877310 40 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGACACA chr4 + 94230402 44112716 44112715 44112755 44112716 44112715 44112755 40 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACA ..................:...........:x..x..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 19764555 NA +3175 chr4 + 190214555 63877273 63877272 63877331 59 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGACACACATATATGAAAACATCTGCAG chr4 + 94230402 75300456 75300455 75300508 75300456 75300455 75300508 53 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCA-GTAT-----CATCTGCAG ..............................:...x.:x..-:...-----......... 40M1D4M5D9M 48/53 90.6% 53/94230402 0.0% 6/53 11.3% -11423183 -82807219 +3606 chr4 + 190214555 63877273 63877272 63877342 70 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGACACACA-TATATGAAAACATCTGCAGGGCTTTTATGA chr4 + 94230402 44112716 44112715 44112786 44112716 44112715 44112786 71 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTTCCAGGAGTCTGGTAA ...............................x:.:.....-.x.xx...:....:.x....:x.:.x:.:. 40M1I30M 55/70 78.6% 71/94230402 0.0% 1/70 1.4% 19764557 NA +3449 chr4 + 190214555 63885832 63885831 63885949 118 AGAAAAAGAAAGAAAGAAAAGGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAAGAGAGAGAGAGAAAGGAAAGAAGGAAGGAAGGAAGG------AAGGAAGGAAGGAAGGAAG chr4 + 94230402 51148383 51148382 51148503 51148383 51148382 51148503 121 AGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAA--TCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGA-AAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ....:...xx.x.:...:.::..:.........x.:...xxx....--xx:...x.:..x.x:...:.x........::....:.-:.....:...x:.------:.:.x.x.........:.. 46M2D37M1D13M6I19M 79/115 68.7% 121/94230402 0.0% 9/115 7.8% 12737449 NA +3198 chr4 + 190214555 63885839 63885838 63885913 75 GAAAGAAAGAAAAGGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAA------------------GAGAGAGAGAGAAAGGAAA chr4 + 94230402 32265570 32265569 32265662 32265570 32265569 32265662 93 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA .:...:........::.:..:..:.:::::...:.....:.....x..x.:.....------------------..:.x.....:......:. 56M18I19M 54/75 72.0% 93/94230402 0.0% 18/75 24.0% 31620269 NA +3153 chr4 + 190214555 63885850 63885849 63885930 81 AAGGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAAGAGAGAGAGAGAAAGGAAAGAAGGAAGGAAGGAAGG chr4 + 94230402 86089083 86089082 86089163 86089083 86089082 86089163 81 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGG .:.::...::.:....x:x...:..:...:.........x..:::..:x..:x:......::.::x..x..:.:x...... 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% -22203233 -72027169 +3425 chr4 + 190214555 63885897 63885896 63885973 77 GAGAGAGAGAAAGGAAAG--AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAATGAG chr4 + 94230402 1225211 1225210 1225289 1225211 1225210 1225289 79 GAGAAAGAGGACTGAGAGCAAAGGTGGGAAGGCAGAAAAAAAGAAGTGGTTGTGGGAAGGAACAAAAGAAGGAAATGAG ....:....:.xx..:..--....x:......x..:..::...:.:x.:xx.x:........x:............... 18M2I59M 56/77 72.7% 79/94230402 0.0% 2/77 2.6% 62660686 NA +3179 chr4 + 190214555 63941840 63941839 63941923 84 TGTGTGTATATATACACAC------ACATACATACACACATACATGTATATATGCATATACATGATATATATGTATTTATATATAAAGTA chr4 + 94230402 23247723 23247722 23247812 23247723 23247722 23247812 90 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATA .........::.:.....:------.....::............:::.:.:.x.x.x.x.x:.x.:..:x..:x..x.......:..:.. 19M6I65M 58/84 69.0% 90/94230402 0.0% 6/84 7.1% 40694117 NA +3372 chr4 + 190214555 63957626 63957625 63957682 57 TGTGTGTGTGTATATATATATATATATATATATATATATATGTATCTAAATGATTTT chr4 + 94230402 48958675 48958674 48958731 48958675 48958674 48958731 57 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGATTTT .......x......:........:.:.:........x.....x.xx.x.:....... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 14998951 NA +18248 chr4 + 190214555 63958745 63958744 63959114 370 AGTCATTATCTCTTTCCAGAGTAATAGTTTGGAGGAACAGGTGCATGTCATCTCAGTCTCAGTCTGGAGCTCATTTCAATAAACTCAGATTGGCTGATTTTTTTTTAAGACATGACTATTAGTTGTCTCATTTGTTACAGCCATTCTTTGCTGTTCTCACATCTGTCAAAGTCTATACAAATAGCCCCGTAGAGGAAGCAGATGTTACAAAGTTATAATTTAGTTGTTTGTTTTGCCTCATAGACAAAATGTGGACAGTAAACATCCTGGTCTGTTAAGCATCATTATCAAATGCAAATTGTTGATGAATTTTTTGATTAGTTTGTCA-CGGCTTTTGTAA----TGCTTATCTCACTAATTAGTACTGGAGAAA chr4 + 94230402 50444403 50444402 50444770 50444403 50444402 50444770 368 AGACACCATCTCTCTCCTGAACAGCAGTCAGAAGGAACAGCTGCGTGTTATTTCTGCCTTGGTTTGGAACTTGTTTCAATAAGCTGAGATTGGCTG--TGTTTTCCAAGAC-TG--TGTTAGATAGCTCATTTGTAACAGCCATTCTTTGGAGCTCTCGCATCTGTCAAACCTCATACAAATCCTCCCCCAGAGGAAGCAGATGTTAGAAAGTTATAATTTAGATGTTTGTTTTGCCTCTTAGAAGAGATCTGGACAGCAATCTCTGTGGTCTGCTAAACATCATTAGCAAATGCAAATTGTTGATGAA--TCTGGATTAGTTTGTAAGTGATTTTTGTAACAACTCTTCACCTCAAGAATTAAAGGTAGGGGAA ..x..::......:...x..::.::...:x.:........x...:...:..:..x.:..::..:....:..::.........:..x..........--.x....::.....-..--.:....x.:x.........x..............xx.:....:...........x:::........xx:...x:.................x...............x...............x....x:.:..x.......:..x.x::x.......:...:........x.....................--.:.x...........x.-:.::........----.x:.:.:....xx.....:x:x.:.:.:.. 96M2D13M1D2M2D193M2D17M1I12M4I30M 281/363 77.4% 368/94230402 0.0% 12/363 3.3% 13514342 NA +8524 chr4 + 190214555 63965998 63965997 63966333 336 AAAAATGTACTTT-TATTAAAGTGTAATGATCCTG-----------CCTGTCAATGGGGAAA-ACTTCTGTCCCTGAGCATGTTTCCTACCAAAGATGGCATCATGATTAATGACAGAAAATGCTAGATAAATGGGTATCATAAAAGCTGCCAAAACGTTCATTCTTTTGCAAGTTACATTTTATCTTACATTGTCTCT-----------TACATTATTAATGCAGAAAGCTGTTATTTC-----ATTCATGAATAATTGAGTA-AGTGCAGAGTGGAGGTTGGAAAATTGAG---------AAAAAAAAGAGATGCCGTTTTCTCTCATCACAG-TTGTGTATATACAGAGGACAGTAACAAATGTTATTGTCAA chr4 + 94230402 50450794 50450793 50451169 50450794 50450793 50451169 376 AAAAATATGCTTTATGCTTGCAGGTAGTGAACCTGTGTACCAGATCCATGTCAGTGGGGAAATATACCCGTTGTTGAGCAAATGTTCTAGTCAGCAAAGCACGAGGATTAATGATGGAAAATACTAGATGAATGAGTATTATAAAAGCTGCCAAAGCTCTGAATCCCATATCGGTTACATTTTACCTTACACATCTCCTTAGTGTAGTAGTAAATTATTAATGCTGAAAACTATTTTTTTTTTTAATTCATGAATAATTTAATATGGCACTGGATGGGTGATGGGGAGATAGTATGCAGCGCAGGAACAAAGGCAGCAGTTCCTACTGATCCAAGATTCTGTGTGTGCTAAGTAAGATAAGACCTGGGATCATCAA ......:.:....-.::.x:x:x...:...x....-----------.x.....:........-.:x:.:..:x:......x:.x.:...x:x.:x.x:...:x.x.........::......:......:....:....:...............:.x:.x.x..::x.::x:...........:......:xx:::..-----------..x...........x....:..:..x...:-----..............x.:..-:.::.x.::...:x.x...::.:x.::x---------.::..x..::.xx..x...:::x..x...xx..-..x...:.:.:.x:..x.x::...x.xx..xx..::.... 13M1I21M11I16M1I136M11I30M5I19M1I28M9I33M1I40M 221/336 65.8% 376/94230402 0.0% 40/336 11.9% 13515204 NA +18487 chr4 + 190214555 64010198 64010197 64010532 335 TGTTCTCAAAATATCAAAAACATCCAATTCAATGCATGATATTTTATGAAATTTGCAGTTAATTTAAAAATTGACCAGTAGTTACAGATGAATACTATTTTTCATTTTGTTTCTAGACACTTTAATCAACCTGCTGGCATGTTGGGATCAATCACTCGTGCCAGTTGTGTTCATTCATCTTTGTCCTGCCATTCATCCTATGGCAGCAAGGAGCACACTGTGTAATTGAATTTGGTTGAAATCTAATATAAGAGCAAACTGTGACACAGTAGTTATAACCAGTTTGATTGAAAAATGTGAGCACATGTTTTTGTTAGTTGCTTGCAGGAAGAGGA chr4 + 94230402 50471189 50471188 50471523 50471189 50471188 50471523 335 TGCTCTTGCAAAATCAACAGGATTCAGACTGTTTCTTGACATTTGGGGAAAACAGCATTTAATTGAAGACCCAACCAGTAGTTACAGATGAATACTATTCCTCATTTTGCTTCTGGACACTTTAATCAACCTGCCTGCATGTTGGGATCAATCAGTTTCAGCAGTTTTGTTCATTCATCTTCGTCCTGCCATTCATCTCATGGCAGCAAGGAGAACACTGTGTAATTGAATTTAGTTGAAATCTAATACAAGGACAAACCGTGACAAGCCAGCTATAATCAGCTTGATTCTGAATTTTCAGAACAAGTATTAGCTTTGTAATTCCAGGGAGAGGA ..:...::x..x.....x.:x..:..:x:::x.x.x...:....x:x....x:x...x......x..:.x:::..........................::........:....:...................:x..................x.:x::x.....x..............:...............::..............x...................:..............:...::.....:......x:x:..:.....:...:......xx:..x.x.x..x...x..x..x.:.xxx.:x..x....:...... 335M 257/335 76.7% 335/94230402 0.0% 0/335 0.0% 13539009 NA +3169 chr4 + 190214555 64074779 64074778 64074849 71 ACGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::......--...x......:...........::........x.xx.x...xx:.x......::.:.. 11M2D58M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% -11958417 -82271985 +3277 chr4 + 190214555 64075746 64075745 64075794 49 AAAAAATTTACAAGAAAAAAAAAAAACCAACAAAAAGTGGGTGAAGGAT chr4 + 94230402 6539314 6539313 6539362 6539314 6539313 6539362 49 AAAAGGTTTAGAAGAAAAAAAAAAAAACAACAAAAAATTAATGAAGGAT ....::....x...............x.........:.x::........ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 57536432 NA +3601 chr4 + 190214555 64093395 64093394 64093453 59 GCACCTGTAGTCCTAGCTACTCGAAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.:.......:...........x.xx.x...x..........::.:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -11939811 -82290591 +3422 chr4 + 190214555 64105427 64105426 64105499 73 TGTGCCTGTAGTCCCAGCTACTCGAGAGGCTGGGGCAGAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:.........:..:......:.x.xx:x...x...........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -11927778 -82302624 +7982 chr4 + 190214555 64131866 64131865 64132022 157 ATAATTAAATAAAAAACTTGTGAAAGAGCATTATTGTTTTCATTTTGTTGATTGCAAAGTTGGTCTTCCTGCAGGGGATATTGGAAA-AATTTATGCTTTTAACCTTTAGTTTAGAATTAATGTTATTGCAGAGCTTTGGGATTACAAATAGCTATCT chr4 + 94230402 50502057 50502056 50502214 50502057 50502056 50502214 158 ACAAGAAAATAAAACGGTCATGAAATATCATTAGTGTTTTCCTTTTGTTGATTACTGAGTTTCTTTAGCTGCAGGAAATGCTGGGGAGAATTTATGGCTTCAACCTTTTGTTTAAAATTAATGTAATTGTTGAGCTTTGGGATTATGAACAGCTGTCT .:..xx........x:x.::.....x.x.....x.......x...........:.x:....xx.:.xx.......::..::...::.-........x:..:.......x.....:.........x....:x..............::..:....:... 87M1I70M 119/157 75.8% 158/94230402 0.0% 1/157 0.6% 13629809 NA +3045 chr4 + 190214555 64133153 64133152 64133219 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAACTGCTTAAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.:x.x...x::...:....::.:..xxxx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -11900058 -82330344 +12247 chr4 + 190214555 64153729 64153728 64154259 531 TTAAATTGAAATATAATGACCATACTATAAATATAAGATCTATGACAGATATTAAGTCAAATGATTTAAGCCAAAACCAAACAGTAGGAAATGAGAGATATATACTGAGTAAATTATAGAACACTTTATTCAAATTGATGGTTCC-AGCAAGATAAAATAAACATGTGTCCATA-ATGTGTTAATGATTCATTTACTATGTTAATTACTCAGTTTGC---AATTAAGCTTCTGGTTGTACTCATTATTCTAATAGAAAGAAAATATTTTTGTAGAAGTATTATGCTTGAATCAGTAAGTTTAC-ATTGTATTAA--TTTTGAACACAAAATGAACAAAGAAAGAATTTTGGT-TGACTAGGATTATTTTGAGTTTGTCTTTCTGTTCTGATGTTCTTATTCTTTATGCTTAGTGACACACAATTATCAATTAACTCAGTCAAAAACCAAACTAATAACATTGCTTCTTTTTCTGGCAATCTTTAAGGGAATTCAATAAGAACATTCCAAG--CCAATAAA-AAGAAGCAAATTAAAGCATTCA chr4 + 94230402 50505874 50505873 50506390 50505874 50505873 50506390 517 TTAAGGTGAAAGCTACTGTTTTAACTGTGAATGGAGAACATATATCAGCAATCACATCTTCAATTTTAAGCTATAACTGAGCTGTAGGAAGC-AGAACTCCATACTGAGTAAATTATA-AATAGTTTATTTCACTTGATCTTGCCTAGCAAGCTAAAATAAACATGCATCCTTAGAATTATCAGAAATTCATGTAACATGTTAATTACTCAGTGTGCTGTCATTAGATTTCTAGTAGCACTCATTAGTCTGGCAGCTCTCAAGGGTTTCTGCAGCAGCACTTGGCTTGTAATGATAATGATACCATTTCGCCAAGCTTCTGAAGGCTTCTT--------------TTTTGCTCTGACTTGCATTGATT---GTTTCATTTACGTTTTTGCTATTGCTATTGTTTAT------TACCAAGAGCTTATCAATTAGCTCAGTCAAGATCCCAACAAATACTACTGTTTCACTCACTAAAAATCAATAAGGAAACTCAATAA-CTCCTTCCAAAACCCAATAAAGAAGCAACAAATTAAAGTGTTCA ....:x.....xx..x..x::xx...:.:...:x.::.:x...:x...xx..:.x:..xxxx:x.......:.x...::.:.x.......::-...:x.x:.................-..:.x......:x.x.....xx.x..-......x.............::...x..-.xx.:.:.:x:......x..x:................x...---x....:::....:..x.:........x...:::..xxxxx..:x:...:..:..x..:.:.xx.....x.x:::...xxx...-...x::::..--..:....x:.xxxx.--------------.....x.-.....x.x...:x..---....xx:..x.xx..:..x.:..x:....x.....------.:x..x:x:x..........:.........:.x..x...x....x:.:..:...x:.:x..::x....xx.....:..:.......-xx.x......:--........-...x.:..........::.... 92M1D25M1D26M1I28M1I42M3I83M1I10M2I15M14D7M1I15M3D35M6D86M1D11M2I8M1I22M 341/505 67.5% 517/94230402 0.0% 38/505 7.5% 13647855 NA +3081 chr4 + 190214555 64155267 64155266 64155321 55 TGTGTATATACATACACATATACATATGTGTGTACACATATACATATGTGTGTAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.::............:.:::.......:.x.x...:...:.:...:.:... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 8460813 NA +3052 chr4 + 190214555 64155300 64155299 64155370 71 ACACATATACATATGTGTGTATATATATACACACATATACAAATGTGTATACACATATACATGTGTGTATA chr4 + 94230402 55694437 55694436 55694507 55694437 55694436 55694507 71 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATA ...x..::x.x.:.x:x.....::...:.:......:.:::x........x.x...:...:.....:.... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 8460863 NA +4118 chr4 + 190214555 64155512 64155511 64155713 202 GTATACACATACACGTATGTGTGTACACATACGTATGT-GTATACACATACACGT------------ATGTGTGTATACACATATACGTATGTGTATATATATACATAT--ACGTATGTG-------TGTATATATACATATACGTATGTGTGTATATATACACACATATATATATTATATATATAAAACTATATATACACACACACACACACACACATATATA chr4 + 94230402 13481890 13481889 13482108 13481890 13481889 13482108 219 GTATATATGTCCGTGTACATATGCACTTATAAATGTTTAGTATATATAGACACGTGGATAGAGAATAATGTAGTTATATA---AGACCTCTGTATATATTGATGTCTATTAACGTAGACAGCAGCGTTGTGAAGTTACACACAGGTATATAG--CTCCTTGCATGTATATATATTTTAAAAGCTTAAAAATATATATATGCACACCCATACACATATATATTTA .....:.::.x.::...::.:..:..x:...x:.:.x.-.....:.:.x......------------....:xx....:.---.x..x.x...:.....xx..::x...--.....x:::-------...:x.xx....:.:.x....:.:x--x.x:x.:..:::........x...x.x::x.....x........::.....x..:.....:.:....x.. 38M1I16M12I13M3D26M2I9M7I25M2D70M 129/197 65.5% 219/94230402 0.0% 27/197 13.7% 50673622 NA +3765 chr4 + 190214555 64159851 64159850 64159933 83 CACTGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACTCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....--.....x....:.:...........::...:....x.xx.x...x.........:.:.:..x.xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -11873346 -82357056 +3029 chr4 + 190214555 64168363 64168362 64168428 66 CTTTTTTCCTCCTTTTCATTCTTTCTTTTTTCTTTCAACCTCATCTACCTCTTATCTTTTAACTTT chr4 + 94230402 67789325 67789324 67789390 67789325 67789324 67789390 66 CTTTTTTTTTCCCCTTCTTTCTTTCTTTTTCCTTTCAGAGCCATCCTCTTAGTATCTCGTCCCTTT .......::...::...x............:......:xx:....:x.:.xx.....:x.xx.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -3620962 -90609440 +3162 chr4 + 190214555 64176223 64176222 64176303 81 CGGTGGTGGGCGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:......--.:.x......:...........::........x.xx.x...xx::x.........:..x.xx:.x:..:.. 8M2D71M 56/79 70.9% 79/94230402 0.0% 2/79 2.5% -11856976 -82373426 +3129 chr4 + 190214555 64181439 64181438 64181491 53 ATGAGCCATGATATATTCTGACCATTTTCTTTTTTTTCTTTTTTTCTTTTTTT chr4 + 94230402 44130102 44130101 44130154 44130102 44130101 44130154 53 ATGAACCATGACATACTCTGAACAATTTCCTTTGTTACTGTCTTTTTTTTTTT ....:......:...:.....x..x....:...x..x..x.:...:....... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 20051337 NA +3095 chr4 + 190214555 64181999 64181998 64182067 69 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATAGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:.........:.::........x.xx.x...xx:........::.:.. 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% -11851202 -82379200 +3281 chr4 + 190214555 64184857 64184856 64184938 82 CATGGTGGCGGGCACCAGTAATCCCAGCTAATTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAAGTGCAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::....:.--...xx...:.:.......x...::........x:xx.x...x.............:.:x.x::..:..:. 10M2D70M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% -11848340 -82382062 +3211 chr4 + 190214555 64189250 64189249 64189309 60 ACTTTCTTGATTTTTTTTCCTCAGGTTGTTCACTCTTTTTGTTGTTGTTGTTGTTGTTGT chr4 + 94230402 82090599 82090598 82090658 82090599 82090598 82090658 60 ATTTTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTTGT .:...:..xx..:........:xx:..x...x:::............:............ 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -17901349 -76329053 +3080 chr4 + 190214555 64200744 64200743 64200792 49 CACACACACACACACACACACACACAGAAAAAAAAAAAGAAAGAAAGAA chr4 + 94230402 70425770 70425769 70425818 70425770 70425769 70425818 49 CACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAATTAGAA ....::.........:........x.:.....:.....:...:xx.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -6225026 -88005376 +3190 chr4 + 190214555 64200746 64200745 64200852 107 CACACACACACACACACACACACAGAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAATTTATCATCCACCTTTTGTTTAGCATATAATCAGGAAA----TAATAAATAA chr4 + 94230402 90895215 90895214 90895325 90895215 90895214 90895325 111 CAAACATTGACACACACACACACATTAAAAAAAAAAAAAAAAAGGATCAGAGATTAGAATTGTCCATGTAAACGTTCTCAAGCAAAAACTCCTGAAAATCCTAAAAAACAA ..x...:xx...............xx..........:...:..:..xx...:.xx.:....xx:...x:.xx:x..x.:x....x.x.x..xx....----...x...:.. 97M4I10M 73/107 68.2% 111/94230402 0.0% 4/107 3.7% -26694469 -67535933 +3163 chr4 + 190214555 64200746 64200745 64200794 49 CACACACACACACACACACACACAGAAAAAAAAAAAGAAAGAAAGAAAA chr4 + 94230402 70425770 70425769 70425818 70425770 70425769 70425818 49 CACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAATTAGAA ....::.........:........:.......:...:...:..xx.:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -6225024 -88005378 +3091 chr4 + 190214555 64200752 64200751 64200788 37 CACACACACACACACACAGAAAAAAAAAAAGAAAGAA chr4 + 94230402 39719037 39719036 39719073 39719037 39719036 39719073 37 CACACACACGCACACACAAAAAAAAAAAAAGAAAAAA .........:........:...............:.. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 24481715 NA +3112 chr4 + 190214555 64200759 64200758 64200808 50 ACACACACACAGAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAA---AATTTA chr4 + 94230402 70233542 70233541 70233594 70233542 70233541 70233594 53 ACACACACACAGAAAAAAATGAAGAAGTAGGGAAAAAAAAAGAACAGAATTTA ...................x:.....:x.::.....:.......---...... 44M3I6M 43/50 86.0% 53/94230402 0.0% 3/50 6.0% -6032783 -88197619 +3668 chr4 + 190214555 64201664 64201663 64201739 76 TTGGGTGTGTGTGTGTGTGTGTGTGTATATATATATATATAAGTATATATATATGTATATAAATATATACATACAT chr4 + 94230402 85834540 85834539 85834615 85834540 85834539 85834615 76 TTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x..x.................:.xx..:..x::...:.x:.:..x...:....x...:x.:.:.....:.... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -21632876 -72597526 +3389 chr4 + 190214555 64201669 64201668 64201743 75 TGTGTGTGTGTGTGTGTGTGTATATATATATATATAAGTATATATATATGTATATAAATATATACATACATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...............:...xx..:..x::.x::....:..x..::..:.xx..::.:.......:.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -21632872 -72597530 +25444 chr4 + 190214555 64216553 64216552 64217390 838 CTAAAGCAGATAATAACATTAAAGGCATGGCTCTCATTTCCTGAGGTTTAAACTATTTTGTTTTACAGTTTTAGGGAAATGTGCAATATCAACTGTGCAACATCAATAATTTCTATGTCATGA-GTCTTAGACA------ATGGACCTGCAGATGTGTTTCTTGATAACACATTTTTTTTTTCTTTAGGGAGTAATAAGTTCT--GCTGTGAA-GCTGATGTCAGCAAACTCTACAACTTTGATCTTCATAAGGTTATGCTTTTGAAATTAATGGGACAGCTGTATATGAAATCAAAATCAATTTACTAT----------------------TTTCCACAATGGAGAAAGA----------------------ATGAATTATCCAATATAAAGTGTGGAGCACTATAACGGCTGCAATCTCATCTCACTATTCTTATGTTTTTTAATAAACTGTTCATGCTTTATTCTTGTAGTTTATGACATCAAAGGGACTCTTCTGTAAAATTACAGCAATAAATTTCACCTTATGCTGGACAGAGTTTACTTCTTTTCT---GTCCATCTGTCATCCTGTTTTGCAAATAATCAAGACATGACAAAATTGATTAAAGATTTATCTTGCCTTCATGAAATAGA---ATAGCTGC-CTTACTTAGCTGAAACATGGCAATGTAAAAGCAGAGCTAAGTTTAGACCAAGTTGCTACCATTTAACACCACTCAAAAGACAAGTGATATTCAGGTAAACCTGATGCTGTTGACTTATTATCGCTGAATATTTAATTCCTTG-----TAGTCCAAGTTAAAGTAGATTTCATTATTTGCCACTGGCATTTGGCAAAAATTGTTAATCAGTTATAAAAAAATGCATTGTT-TATTACCATCTGCTGTCACATCTGTTT chr4 + 94230402 50524380 50524379 50525259 50524380 50524379 50525259 880 CCAAAATGAAAAGTACAATCAAAGGCGTGACTGTCATTTGGTGACAATGACAATGTTTTGCTAAGTA--TTCCAGTAAAGATGATACAGTAGTGGTGTCACATTGTGCATTTATATGTCACAATGCTTTTTACAGTAGCTATAGACTTGCAGATGCACTCCCTGATAATCCTGCAATTTTATCATCAGGGAGTGATAAGCTCTCAGATGTGAAAGCTGATGTCAGCGTCTTCTGCCACTTTGATCTGCGTGAGTTGATGCCTTGAAAATTAATGAGAATACTACATGTGAAATCAGAATCAATCCGCTGTGGGTTTTATCCCCTCTCCGCCTTTCCCAGAGCGGTGGCAGGGGGGAGGAGGTGGGTGGGGGATATGCGTTATCAAATTTGAAGCGTGGCAGAGTATAAAGGCTGTAATCTCATCTCAGGATTCTTATGGCTTT-AATAAACTCTTCATGCTTCATTCTTGCCGTTTACTGCATCAGAGGGACCCTTTTGCAAAATTGCAGCCATAAATTTTCCCTTCTGCTGGACAGATTTTACTCCCTTGCTTTGGTATATATGTCATCCTGCTTTCAACAGAGTCAGGACATGACAAAACTGATTAAACATTTGTATTACCTCTTCAAAATGTATAGAGAACTGCAATTTCTTAGGTGGAGGGAAGGAAGGTTAAAGC---TTTGAGCTTACGGGTGTTCCTTGGTGCTTACAAACACAC-AAAGAAAAGTAAAACTCAACT---CCTGCCACTGTTGG---------AATGAA-----AATTCCTTGTCACTTGTTCTAAGATGGGCAAAATATCTTTA-TTACCACTGGCGTTTGGCAAAAGGTATTAGTCAATCATCCAAAAAAGCATTATTGTCTTGCCATCTGCTCCCACATCTGCTT .:...::::.x.:..xx..:......:..:..x......xx...x:x.x.x.x.:.....:.xx::.--..:x:.x...x:..xx.:.x:.::x...:x....::xxx....x.......::.-.::..xx...------..:...:........:::.:.:......:x.xx:xx....x..x.:.......:.....:...--.x......-............:xx:...:.x..........x.:.:..x.x....:..x:.........:..xx:..::..:........:.......:::..:.----------------------..:...x.::..x.:x..:----------------------...x:.....x...x.:...:....x:x.x.....x.....:............xx.........x:...-........x.........:.......:x.....:x:.....:......:...:..:......:....x........:x....x...........x......:.:..x..---..x:..x..........:...xx.x.x.:...:............:........x....:.x..:...::x::....:x.---.x.:....-x..x.....x..:.:x:x:.x..x..x.....---x:.:..:...x:xxx:x.:x:.:x:::...xx.x...x.-.....x....:.x.:...:x.---....x::......:---------:x....-----.........-----.:x..:...x.:::xx.:..x..x...-..:........:..........:x.:...:...:.:..xx.....x.....:..-.x..:.........x:........:.. 67M2D54M1I10M6I63M2I8M1I96M22I19M22I70M1D109M3I80M3I8M1I32M3D39M1D21M3D14M9D6M5D9M5I27M1D54M1I27M 568/813 69.9% 880/94230402 0.0% 92/813 11.3% 13692173 NA +6045 chr4 + 190214555 64218594 64218593 64218827 234 TTTTAAGGTTTCTTATTGAAATTAACCATTATGTGATATAGTGA----------CTTCTTGTAAGTAATAAAAAT----GTTTTAATAACATGAATGCTTCAACAGAAATGCTATGGAATTTAAAATTATCTTTTTAT-GTCTAAATATTCAAAGGCCCTCAAATTAAGAACCAATTTAAAATGTGTAGTTCTCTTGAATGCTTTACAGTAGCAGGAAG----TTTTATAAAATGCAGAATGTGAATTGAAGA chr4 + 94230402 50525944 50525943 50526191 50525944 50525943 50526191 248 TTCCAGGGAGTTGTGTTCAAATTAATCATGACATAATATATTGAAGACTTTTTTTTTTTTACTGATAATGAAAAAATAAGTTCAAATAACCCTCGTGCCTTGGTATAAATGTCACAAAGTTTGAAAATGCAAGTGCGTAGTCTCAAAACTCAAAGGTCTTCAGACTAAGAACCAATTTTAAATGTGTAGCTATCATG-CTGATTT----CAGCAGGGAGCACATCTGATGGGATGCAATACACGAATTGAAAA ..::.:..xx.:x.:..x.......:...x.::.:.....x...----------:..:..::x::....:....x----...:x......x:xx:...:.::::.x.....::.:::.:...:...x.::xxx.x::.-....x..x.:.......:.:...:.:.............x..........:.x..x..-x..x...----:......:..----.:.x..:::.....:x.:::........:. 44M10I21M4I59M1I58M1D7M4D10M4I30M 150/229 65.5% 248/94230402 0.0% 24/229 10.5% 13692650 NA +6936 chr4 + 190214555 64280005 64280004 64280245 241 TCCTTAACTAAGTCTTATTTATTGAATTTATATGTTGCTGTTTTCTATAGGAGATAAGATTCTTTTTTTACAATATGAATGGAATCATTGCTGATTTTCTATGAATATATGAATTGAATTTTCTCAGATAAATCTTATGTTTCTTTTGTGCCCACAAAGACATCTGGATACTCATCAGAAGTGTAAAAATTCCAACT----------------------AGAAGAAAAAAGAAATAATTATTATTTCTTTCTTA-------TTTCTATGA chr4 + 94230402 50554897 50554896 50555151 50554897 50554896 50555151 255 TCATTTACTCTGGGTTAGCTATTGAACTCAG--GCTTCAGCTTTCACCAAGAGCTCAGAAG--------ACAATA-----GGAATCATAGCTGCTTTTCTCCGCACCTCCGGATAAAATTTCTTCAGGTACAGCTTGTGTTTCTTTTGGGCCCAGAGAGACATCTGGATGACCATCAGGAAAGCAAAAATGCCAACTAACAAGGAGGGGAAAAAAAAAAAAAAGGAAAAAGAAAGGATCATGTGTTTTCTTTTAGTGTTTGTTTCTGTGA ..x..x...xx.xx...x:.......:.:.x--.:.x.x.:....xx:.:...x.x...xx--------......-----........x....x......x:.x.:x.x:.:..x:.....::....:..x.x...:...........x.....x.:............:x:......:.:x.:......x......----------------------.:...:.........x:..:..xxx..:.:.:...-------.....:... 31M2D28M8D6M5D117M22I35M7I9M 162/226 71.7% 255/94230402 0.0% 44/226 19.5% 13725108 NA +4211 chr4 + 190214555 64281036 64281035 64281094 59 CTTACCTGGCAGTGTTTGTGTCATGACTGTGAAACTAATCCATGATCCAATCTGTTATA chr4 + 94230402 50556026 50556025 50556084 50556026 50556025 50556084 59 CCTACCTGGCAGGGTTTGTGTCATTACCGTGAAACTAATCCAAGACCCAACCTGTTGCA .:..........x...........x..:..............x..:....:.....::. 59M 50/59 84.7% 59/94230402 0.0% 0/59 0.0% 13725010 NA +6577 chr4 + 190214555 64281463 64281462 64281586 124 AAATAACATACCTCATAGGTGTAGTTAGGACATGAAACCAGGAAAAACATCCATGTGAAGGGGTTATAATTTGGACTTGGGAAACAGGCATTGTTTCCTTTTTCAA--AGGAAAGTAAAATGTCAA chr4 + 94230402 50556460 50556459 50556585 50556460 50556459 50556585 126 AAGTCATGTACCTCATAAGTATAGTTGGGACAGGATACCAGCAAGAAGAGCCACGTGAAGGGGTTGTAGGTTGGACTTGGAAAACAGGCTTTGTTTCCTTTACAAAACAGGGGAGAAAAAAAACAA ..:.x.::.........:..:.....:.....x..x.....x..:..x.x...:...........:..:x..........:........x...........x:x..--...::..x....x:x... 106M2I18M 96/124 77.4% 126/94230402 0.0% 2/124 1.6% 13725003 NA +3173 chr4 + 190214555 64299935 64299934 64300062 128 ATTAGAGCGTGAATAGCAAAATATATATATGATACATACCAGAAAATTGATAGCAGATACTGTGATTTGCCTGTTTCCAAATGCTGGAGAGTAGAAAAAGAATAT-------GTCATGCAG-ATACTCATAGTTTG chr4 + 94230402 50561822 50561821 50561957 50561822 50561821 50561957 136 ATTGCAGAATAATTCATAAAAGTTTTACTTTGTACTTACCAGAAAAGCAAGGGCAGCAAGAGAAACTTGTCTGTGGCCAAATGCTAGAAAATAGAATGAAATTATAAATTGAATTTTACAGTATGCACATGGTTTG ...:x..x:.:.x.x::....xx.x..:x.x:...x..........x::.x:....xx.xx.x:.:...:....xx.........:..:.:.....x:.:.x...-------:.:x.:...-..:.x...:..... 105M7I9M1I14M 82/128 64.1% 136/94230402 0.0% 8/128 6.2% 13738113 NA +6641 chr4 + 190214555 64305159 64305158 64305257 99 TACATACATGGTGGTGTATATAGTGGATGATTAATGTAGTAGGCAATCCAAGAAGTAAATCCCCAGTAAAAGGCACAACTCTGCAAACAAAACAAAACA chr4 + 94230402 50563201 50563200 50563299 50563201 50563200 50563299 99 TACATACATGGTGGCGTATATCGGGGATGGTTGATGTAGTATGCAATCCAAGAAGTGAATCCCCAGTAAAAGACACAGCCCTGGAATGGACAAAAAACA ..............:......x.x.....:..:........x..............:...............:....:.:...x..xx:.x.x...... 99M 83/99 83.8% 99/94230402 0.0% 0/99 0.0% 13741958 NA +8746 chr4 + 190214555 64309822 64309821 64310410 589 TCACCATTATCAAATTTTTCAAAGGTGTGTGTCCTGCAGAAACTTTGTGAACAAATAAGGTTTCCAAAAGGTATCGGATGTAGTGTATACAATGACAGAAGCAAGCCAAGCTGGAAAAAAAAATAAAACATAAACATGAAAATCCTTTTGAAGTTCTGGCTTGCCTCATGCATGATACATTTTAATTTTTT--TAGTTTAAT-ATGCTAGCTA----TTGGGAAACATTGTTTCT-GGTAGCTAAAACACAAATACTTGCTTTAATATTTTATTTTCAC--AATTTTCTAAATTTAGTAATAAAAGTAGCTGTTATAAGAGTCTCTATAAATTTA-CTTCTGATGACATTAGAAATATTTTATAATACCAGTCATAAACT-----------GTTATGCTCACA---------CCTGTCCCAGGAGTGGGTATAAATATAATAATTGCAAATATGTTCATATCGAAATACTTCGACTG--------AAACAGACAATTTACAAGTTTTAAAAATATCCAAAGCCTAGT-TGGAATGTATTTGACATTTTATAATAGTCAGAATAACTTTTTAATTGTCTGGTTGTCCTTTAGCA-----AGTACTAAGATTGAGAAAATTTAAATTGCATTTTCT chr4 + 94230402 50564994 50564993 50565596 50564994 50564993 50565596 603 TTACCTTTATCATATTTTTCAGGGGAGTGTGCCCTCCAGAAAACTTGTGAACAAATAATGTCTCCAGAAGATGTCTGATGTAGTGCAAACAATGACAGAAGCAGGCCAAGCTGAAAGATAAAAAAGAAGAAATAAAGGAAA------TTAAGGT-----------AAGTGAAAGATTGATTTTTATTATTTCACAGTTTAATGACACAAAAAAAGAGTTAAGGACTAATATTCTTAAACAGTGAAATCGTGA------GATTTAAGATTTTGTCTTAATTGAAGCATCTGGAATCAGAGATTAATGGAATAATTTTTCAGTGCTATACAAAGTTGCCTTCATTTTGTAGGGGAACAGCTTCTTTTCACCAGCCTTGAATTAAAAAGAGCTCGTCGAGCTCTCAATGTGATGCATCGCCCTGACAG--------GACATTAAAGCAGGACAGCTGTGTATACAAGCAGACATCTGCTGTGCTTTTCCAAAAGAAGTCTCCCACGTTTTAAGGCTACCTTAATGTTCCTGCAGGATGTGTCTGACATTTAAAAACATTCTGAATAGCTTCTGAATGGTTTCCTTGTCCTTTGCCAACTTGAGTAGCTGCATGGCGGTAGTTTGTATTTCATTTCCT .:...x......x........::..x.....:...x......x:..............x..:....:...:.:..x.........:.x...............:.........:..:.x....x.:..x.x.x.x.x....------..:.:..-----------xx:..x.x...xx.....x...x...--:........-.::.x.:xx.----..::.:.x:.x.:..::.-:::..:x...x.:::.------.x.....x.....:.:..x.:--..x:x...::.x.:..x:..x..x.x.::x:..x.xx::xx..x..:...x..:-....xxx.x::.xx:...xx::..:x.xx:.....:.x.:..:.-----------..::x....x..---------x::.:..:::x..--------:.:..x.x.::x.x.x.xx...x:...:x::x.x..x..x:...--------x..x...x:x:.:x..x.......::x..:.:x..xx:.xx.-::.:....:.:........x.x..:.x..x.....:...:.x...x..:.xx.........:x..-----....x:x:x..x.x.:x.:...:x...x.....:.. 141M6D7M11D26M2I9M1I10M4I18M1I16M6D21M2I54M1I44M11I12M9I13M8D44M8I42M1I65M5I36M 351/558 62.9% 603/94230402 0.0% 76/558 13.6% 13744828 NA +6950 chr4 + 190214555 64314634 64314633 64314790 157 TGTGTATCACTTACTGTACCACTGGGTGGCGTAATCTTCTAGCACTCTCTTTTCCATCATATATACATGGGATCCTCAAATAAAAGAGGAGGTATATTAGCAGAGGTCCTGTGTATTCAGCCAAAAACACCTGAAAATAAAACATGATTTAGATTAA chr4 + 94230402 50567627 50567626 50567783 50567627 50567626 50567783 157 TGAGTGTCACTTACTGAACCACTGGGTGGCGGAAGTTCTTCGTACTTTCCACTTGATCATAAATAGTTGAGAGACGAATGTAAAAGAGCAGGTATATTAGTAGAGGCCCAGTGTATTCTGTTAGAAAAAACTAGAAATGAAAAATAAAATAGCTGAA ..x..:..........x..............x..x:.::.x.:...:..:x:.:x......x...xx..:..xx.xx.x:........x...........:.....:..x........x.::.:...x.x..::....:...x..:.xx...x.x.. 157M 112/157 71.3% 157/94230402 0.0% 0/157 0.0% 13747007 NA +7798 chr4 + 190214555 64322681 64322680 64322846 166 ACACTTACTGTGGTCCAACTGACTTGTTGACCTAGGTCTGTAGCATACAGTGTGACAATGGAGGAAGCTGCAATACTTTGAATGGTAATGTAGTCCTTCAAAAAAGGCCCGCCTAAAAT---------------AAAAATAACAAGAAAATTTTATTTTAATACAATTTCTTAGCATAACG chr4 + 94230402 50577321 50577320 50577501 50577321 50577320 50577501 181 ATACTTACTGTGGTCCAACCAACCTGCTGACCCAGGTCTGTAAAATACAGTGTAATGATGGAGGACGCTGCTAGGCTTTGAATGTTAACAGAATCCTTCAAATAAGGCCCATCTGGAATGACAGAAAGGGAAGAGAAAATGGCACAAACAGCACACATCTGTTCAGTGGCTTAGCATAATG .:.................::..:..:.....:.........:x.........:.::........x.....x.x:.........x...::x.:.........x.......::..::...---------------:.....::..x:..x.x:x:.:x.:x:.x..:.xx..........:. 119M15I47M 121/166 72.9% 181/94230402 0.0% 15/166 9.0% 13745360 NA +3696 chr4 + 190214555 64325191 64325190 64325379 189 TTCTTCCATGCAACTGCAAAGACCAAACAAACAGACAAACAAACATAAAATGCAAAAGGGTGCTCTCACCATTATTCCATCTGCGATGAGCACCCTTTCTGCAGAAAGTAATA---ATTG--CCTTGCTGAGA--GAATTAAATTTATGTTTGAGTGCTATTTCTTTGG--AGCACCAGGGAACAAGCATTTCCAACA chr4 + 94230402 90037241 90037240 90037428 90037241 90037240 90037428 188 TCCTTTCATCCAAGTGCCAAAAAAAAACAACCAAACAAACAAACAAAAAATGTCTAACAGTGCTTTC------ATTTTGCTTGCCTAGAGAA----TTCTATAGAATCCAACATCTATTGTACTTTGCTTTGACTTTACTAAAATAAGATTCTTCTGACATTTCTCTAGACAGCTCCAGGAGGAAAGCAATTTGAATA .:...:...x...x...x..:.xx......x..:...........x......:xx..x:.....:..------...:::::...xxx...x.----....::....xx:..:.---....--.:.....xx..--xx.:....x.x.x:..:xxx..x:......:.:.--...x.....:::x.....x..:x..:. 67M6D19M4D17M3I4M2I11M2I34M2I27M 120/179 67.0% 188/94230402 0.0% 19/179 10.6% -25712050 -68518352 +4054 chr4 + 190214555 64328440 64328439 64328564 125 TGAATGTCAGCTTTTG---AAAATAGAAAAGGGATTATAAATTAAATA---------AACACATCAGTGAAAAATGCTTCTTACCACATTCTAGCTGCAGACCAACTCGAGAAGGGTACCACTTTGGACCTATTCAA chr4 + 94230402 50577911 50577910 50578041 50577911 50577910 50578041 131 TGAATGCAAGTTCTTGGGCAAACTTGCCAAAGGCTTAGTAATACGTTAGTCTTCTTTAACATCTGTATGAAAA------CTTACTCCGTTCCAGTTGCAGACCAACACGGGAAGGGTACCACTGGGGACCTGTTCAA ......:x..:.:...---...x.x.xx..:..x...xx...xx:x..---------....:x.xx:......------.....:x.:...:..:...........x..:.............xx......:..... 16M3I29M9I16M6D58M 88/119 73.9% 131/94230402 0.0% 18/119 15.1% 13750529 NA +3214 chr4 + 190214555 64345892 64345891 64345990 99 TGGGTGCCTCAACAGCAAAAAAAAAAAAAAAAAAAAAAAACATTTATCATATCC-------CTCAAAGTATTAAGTGGATTTTTATTTACTGCCACTAAGATAAAT chr4 + 94230402 27151179 27151178 27151283 27151179 27151178 27151283 105 TGGAAGCCCTAGCAGTAAAAGAAAAAAAAAGAAAAAAAAATGTTTAAAGTGTCCATTGGAATTCAAGGAGCAAGTTCAGCTTTTACTTG-TGACATTATGAGAAAT ...:x...::.:...:....:.........:.........::....xx:.:...-------:....:.x::x.:x.x:::.....:..:-..x..:..x..x.... 54M7I28M1D16M 66/98 67.3% 105/94230402 0.0% 8/98 8.2% 37194713 NA +3598 chr4 + 190214555 64372283 64372282 64372413 131 ATTTTAGCTGCATTA---AATGAGAAAAGCATAAGAAATGAGTGAAATTATTTGTTTGTATGTGTATGCATAGATCTAATTTGTAGTTTTATATGCTTCTGTTTTCATGAAAAACATTCCTCTCTCCTTGCCTT chr4 + 94230402 63275213 63275212 63275346 63275213 63275212 63275346 134 ATTTTTGCTGCTTTGGAGAAGGAGAAATCCAAAAGGAATATATAGTCTTTCTTTCTCTCTTCTATGTACACAAATCTAGGTTTTCATTTTCTTTGCTTCTGTTTTAATGAAAAGAAATTCGATATCATTGTCCT .....x.....x..:---..x......xx..x...:...:x:.::xx..x:..x:.:x:x.x.:.:.:..:.:.....:x..x.x:....x.x............x.......:x.x.:.xx.x..x...:.:. 15M3I116M 84/131 64.1% 134/94230402 0.0% 3/131 2.3% 1097070 NA +3086 chr4 + 190214555 64379219 64379218 64379282 64 TTTATTTATGCAAACACACACACACACATACACACACACACACACACACACACACACACACACA chr4 + 94230402 54963191 54963190 54963254 54963191 54963190 54963254 64 TTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACA ...:.x...x..x...x.::.....x:...:...........xx...:::.:.x..:....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 9416028 NA +3103 chr4 + 190214555 64382191 64382190 64382271 81 GTATATATATATATATATATATATATATATATATATATATATATAGTATTATGTATATA-TAATATATATTATGTTATATAT chr4 + 94230402 22498237 22498236 22498318 22498237 22498236 22498318 82 GCATAAATTTATGTCTCTATATACATGTATACACAAATATATGTAGTTTTATGTATGCAGTGAAAAATAGTTTGTTTTGGAT .:...x..x...:.x.x......:..:....:.:.x......:....x........::.-.:.x.x...x.x....x.:x.. 59M1I22M 58/81 71.6% 82/94230402 0.0% 1/81 1.2% 41883954 NA +14751 chr4 + 190214555 64409107 64409106 64409553 447 AATAAACTCACCTTATCCAGAATACATATCTGTTTCCTTGTTTGAGCATCAAATATTTCAATCTCAAAGTGAGTCGTTTTTGAATGTTTGACTGCTGGAGTTGGTCTTAGAGGGCCCGCTGAGAGTACAAGTTTTGACAAAAAGTGAAAATTTCTCATATCATCCTTCAGTATGAACCGTGTAGCTCTTTGGGAAAGTAATGCTCTCTTGCGTTCCGAAGCGAGGGACTTGTGCCTTTTGAACATTGTGTGAACTAAGAGGAGGGTCTGTCATGTCAAAAGTAGAAAATTGCAAGTGTG-----TTCCTTTT--GCATCAGTTAAATAC-------TGCTGGAGAACCTTTGAAAGGTCAAATGGTATGCCATTCCAAGAGTTCAGTTTTATTTAGCAGGCTTGAAAACAGTGACT---GATCTTATTTCTATATATAACACGCTATTGTGATTTGCTGTGTAG chr4 + 94230402 50607613 50607612 50608072 50607613 50607612 50608072 460 AATACACTCACCTTGTCCACAATGCAGATCTGCTTCTTGCTTTGCACATCAAGGATCTCCACTTCAAAGTAAGTGACTTTTGAATGTTTGAGCACTGGTGGCGGTTTGAGATGGCCAGCAGAAAGCACCAGCT--GAGAGAAGTTGAAAAAAGTGCGTGT-GTTTTGTGACATGGACAGAGCTCCTCCATGAGCTGAAAGATCCCTCTTGAGTTCTGAGGCGCTGGTCTTCCTCCTCCTGAGCATTGTATGACCCAGCAACAGCTACCGTCATGTCAACAGGGGACAGCTCCAGGGGGAAAACCTTCCTTCCCCGCATCAGTTAAATACAATCACGGGCTGATGAGACAT-GAAAGGTCAAGTGGTGTTCCATTTTAAGAGTACTGTCTTATTTAGCAGGAGTGAAAACAATGGCTCTGTAATCCAAGTCTATATTTAACCAGCTATTGTGATGTGCCGTATGG ....x.........:....x...:..x.....:...:.xx....x:......:x..:..x.::.......:...x::..............x::....x.x:...:.x...x....x..x..:..:..x..:.--..x.:..:x......xxx:x.:.:.-:.::.x::::...:..x.x.:xx...:x..:.xx::x.:xx.:......x....:..:...xx..x...x:x...::...:......:...x.:.:x.:x..xxx.:..........x..x:..x.::.x..:.x.x:-----......::--...............-------x....:x..:x.x.-..........:....:.x.....::......x.x..:............xx........:..:..---x.x:::.xx.......x....xx...........x...:..:.:. 133M2D25M1D138M5I8M2I15M7I14M1D65M3I45M 302/443 68.2% 460/94230402 0.0% 21/443 4.7% 13801494 NA +3208 chr4 + 190214555 64446276 64446275 64446336 61 AAGAAAAATAATGGAGTCAGAGGAAGCTATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 + 94230402 52436517 52436516 52436577 52436517 52436516 52436577 61 AGAAAAACCACTGAAATCAGAAGAAGTGGGCCAAAAAAAAAAAAAGAAAAGAAAGAAGAAA .::....x:.x..:.:.....:....:x:x...............:....:...:..::.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 12009759 NA +3379 chr4 + 190214555 64448277 64448276 64448396 120 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTCAAACCCGGGAG---------GCAGAAGTTGCAGTGAACCGAGATTGCACC-----CCTGCACTCCAGCCTGGCGAC-ACAGAAAG chr4 + 94230402 76033204 76033203 76033337 76033204 76033203 76033337 134 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAG ....:.x......:.........::::........x.xx.x...x....::.....:.:..---------.:....xx..xx.:x..x.:::xx..::..-----.....x.-.....x...:...-:....:.. 61M9I30M5I7M1D13M1I8M 83/119 69.7% 134/94230402 0.0% 16/119 13.4% -11584927 -82645475 +3015 chr4 + 190214555 64471193 64471192 64471260 68 AAAACAACAACAACAACAACAACAACAAAACAAACAAAAACAAAAAAAATGACCAACATTAAATAAAA chr4 + 94230402 5941513 5941512 5941580 5941513 5941512 5941580 68 AAAACAACACAGAATACAACAACAGCAACAAAAAAAAAAAAAAAAAACATGCCCAAATGTACACAAAA .........xx:.xx.........:...x.x...x.....x......x...x....xxx..x.:.... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 58529680 NA +3306 chr4 + 190214555 64471196 64471195 64471244 49 ACAACAACAACAACAACAACAACAAAACAAACAAAAACAAAAAAAATGA chr4 + 94230402 83870617 83870616 83870665 83870617 83870616 83870665 49 ATGACAATAACAACAACAACAACAAACTGAACAAAAAAAAAAAAAAGGA .::....:..................x::........x........x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -19399421 -74830981 +11344 chr4 + 190214555 64476412 64476411 64476652 241 GAAAATAAAGTATATGCAGAAATATGTGTTATAAAATGTGCCTTTAATAGTCAATAAAACTAGCAAGAGTCATTGCTTATTACCTGATAGCTAGTAGGTTTTCAAATTAAAAAATTCATCTGTTACACTCCACTTAGCATATCTATAACTTTCCAACAAAGGATACAATCTTCAAGCAATTACTTTAATGGGCAAAGGATGGAAGGCTAAAATAAGAGGTAATAGAA--GGGAAAATGAAAAG chr4 + 94230402 50622103 50622102 50622345 50622103 50622102 50622345 243 GAAAATCATGTCATTGGAACAGTATGCACTGCAAAATGGAGCTTTAATAGTCAATAAAGCCAGAAAAAGGCAGCGCTTGCTACCTCATAGCTAGCAGGTTTTCAAATTATGGAATTCATCTGTCACACTCCACTTAGCATATCTGTATCACTTCACCAAGTAATGCCACCATCAGATAGTTATTTTAATAGTAAAAGAGTAAATGAATAGTGTAAAGGGTAATAGAATGGGGGAAAAGAAGAG ......x.x..xxx..x.:x.:....:::.::......x:x.................:.:..x..:..x..x:....::.....x........:..............x::...........:....................:..x.x:.:..x...:x:..:.x.:.x...:::.:...:......:.xx....::.::.x.:x..:x:...::..........--...:...x...:.. 227M2I14M 173/241 71.8% 243/94230402 0.0% 2/241 0.8% 13854309 NA +3051 chr4 + 190214555 64504864 64504863 64504938 75 GAGAAAACCAAGCAGGATAAATGCAAAAAAAAAAAAAAAAAAAGAAAATACACCTAGGAATATTATTTTCAAATT chr4 + 94230402 91504303 91504302 91504377 91504303 91504302 91504377 75 GAGAGAAATAAGGAAGCCAAATGGTAAAAAAAAAAAAAAAAAGAAGAATAAATCCAAAGAGGTCAATGCCAAACT ....:..x:...x.:.x:.....xx.................::.:....x.:.:.:::.x:.:.x.x:....:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -26999439 -67230963 +3859 chr4 + 190214555 64522984 64522983 64523066 83 CATAGTGGCGTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGAAGAATTGCTTGAACCCAGGAGGCGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--.....x......:...........::........x.xx:x...x::...........:..x:xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -11510213 -82720189 +3148 chr4 + 190214555 64553498 64553497 64553573 76 TAAATTAAAAGTTTATAT------AATTATATACAGTGTGTGTGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 23522731 23522730 23522811 23522731 23522730 23522811 81 TAAATTGAGA-TTTATATCACGGCAGTCTCAAATTGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTT ......:.:.-.......------.:.:x:.x.:x.x.x..::...........................::....::.x.. 10M1D7M6I58M 57/75 76.0% 81/94230402 0.0% 7/75 9.3% 41030767 NA +3832 chr4 + 190214555 64586925 64586924 64587059 135 TGAGATTTTATTTTATATATAT---AAT----ATATATCATATAAATATATATATTATATATTTATATGATATATATTATATATATTATATATAAAATATATATATTTTATAT---ATAATATTTATATAATA-TATATATATAAT chr4 + 94230402 26320200 26320199 26320343 26320200 26320199 26320343 144 TAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATAC--AATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAAT .:.:..x..x.:......:...---...----....x.x..xx:xx..x..x...:x:.:..x.....:x..:............:......:--.......x....x.:...---...:...x.x.x..:..-.:.....:.... 22M3I3M4I61M2D18M3I17M1I12M 98/133 73.7% 144/94230402 0.0% 13/133 9.8% 38266725 NA +3030 chr4 + 190214555 64615437 64615436 64615479 43 TGTATGAAAGTAAAGAAAAAAAAAAGAAAAAAGAAAAAAGAAA chr4 + 94230402 65482549 65482548 65482591 65482549 65482548 65482591 43 TGTGTGCAAGTGAAGAAAAAGAAAAAAGAAAAGAAAAAGGAAA ...:..x....:........:....:.:..........:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -867112 -93363290 +3529 chr4 + 190214555 64618705 64618704 64618804 100 AGATCTTTCCAGCAAAAAAAAAAAATATATATATATATATATGTATATATATATATATATATAT-ATATATTCTTATGTGCTT---TTGTGGCAAAATTTACTG chr4 + 94230402 85548410 85548409 85548513 85548410 85548409 85548513 104 AAAGCTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTTAGTTGTTGTAAAACTTCTTG .:.x..:.:..:x..........:.xx.....:...:.:.:..:...:..........x.....-.x.:..xxx...x:::..---....x.:....:..x:.. 64M1I18M3I18M 70/100 70.0% 104/94230402 0.0% 4/100 4.0% -20929705 -73300697 +3262 chr4 + 190214555 64618718 64618717 64618770 53 AAAAAAAAAAAATATATATATATATATATGTATATATATATATATATATATAT chr4 + 94230402 85548421 85548420 85548473 85548421 85548420 85548473 53 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ............x.xx.....:...:.:...::...:..........x..... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -20929703 -73300699 +3139 chr4 + 190214555 64618719 64618718 64618772 54 AAAAAAAAAAATATATATATATATATATGTATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...........x.x.xx.....:...:...:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -20929701 -73300701 +3231 chr4 + 190214555 64619065 64619064 64619132 68 AAAAGAGTTTTTGAGAAAAAAAAAGCCTCAATTTTGTCTGTTTTTTTTTTTTTTACCAATTTTCCAAA chr4 + 94230402 25241499 25241498 25241566 25241499 25241498 25241566 68 AAAAGGTTTTTTGAGAAAAAAAAAACTTCATTTTTTGCTGTTTCCTTTATTTGCTTGAGTTTTTTAGA .....:x.................:.:...x....xx......::...x...x:x:x.:....::.:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 39377566 NA +13239 chr4 + 190214555 64658765 64658764 64659132 368 TTTTAATGAAAATAAAAATATATAGGGCAGTGCTTGTCTATTAATTTCTCCTC----------AGTCTAAATCTACTCACGTAC-AAACCTGGCTTGTTGATTGAGTTGTTTCATTAACCATATGAAATGAGACACATGAAACACTTGGGAAAACAGCAAGATTTAGAAGCAAAGAGTGAATTCAAAGAGATGATTTGAAGGTTATGTGGTACAA-GTTCAGTTTCTTCAACTAATTAGGGCTGTTGGGACTCTT--ACAATATTTAGTTTCTAGGTCAAATTAAGTTTAGTGGCTTATTCTGTAGCCAAGTGGAAAATAAAGTTAA--TAAATA-TTTTACAATACAATTATTTT--CAGTTGGTAGTATGTCATCACTTATTATT chr4 + 94230402 52503904 52503903 52504289 52503904 52503903 52504289 386 TTTTATTTCAAGGAACAAAGCAAAGGGTAGTAATTTATTCCAAATTTCAGCTCTTTAGAATTCAGGCAAAACCTGCTCATATATGAAAACCTGCTGCTTGATTGAGTTGTTTCATTAACTGTATGAAATGAGACA-AGGAAACACTTGGGAAACTGGTGAGATGTAGAGACAAAAAGTGCATTCAGGGAGGTGATTTGAAGGTTATGTAGTAAAATGAGCAGTTTCTTCAACTAATTACAGCTTCTGAGATTACTGGGAAATGTGCAGTTTCTAGGTTATATTAAGCTTAGAAACTTCTTATTCAGCCAAACTTATTTTTCAGTTGGTTTAAGTGTTTTTACAATGTGGTTATTTTCCCCATGGGTTATCTATCTCCATTTATTCTT .....x.xx..:x..x..x::.x....:...:x..xx:.x:x......xx...----------..x.x...:..:....::..:-...x.:x...xx......................::..............-.x...............x::.::....x....::....:....x.....::...:.................:...x..-.xx...................x:...x:..:..:.x:.--:x...:.x:...........:.x......:....x::...x..x.x:......::xx.xxx.xx....::--...:.:-.........::::.......--.x:.x...x:.x.:..x:..:.....x.. 53M10I21M1I50M1D79M1I39M2I70M2I6M1I20M2I29M 263/367 71.7% 386/94230402 0.0% 20/367 5.4% 12154861 NA +3463 chr4 + 190214555 64697232 64697231 64697314 83 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -11335965 -82894437 +11735 chr4 + 190214555 64698004 64698003 64698607 604 CATTTGGAGATGATTAAGTTTTCACACAGTTTTCTTCCATGTTACCTTCTGTTTTCCTTCATTTTAAACAAAACAGCTGCTCCTCCATTTGCCTCTTAAGGCATT-------TGGATCATCAAACAGGCATTTGATCTCACATGCTGGTACTCATGGGTTTTGTGGTAATTAAAGATGATAAGGTGAAAGTGGGATAAAGAAGGTCCAAA---CTGTTCATC----GAAGAGTAAGACTGTGTATTCCTCAAAACAAGCAAATGCTACAGTAACTTTAAAGTACCCCCCTGACACTTTGAAGTTTGTCTCTTGTACTGGCAGGTCTAAAATGAGACCCAGCCAAGATAGGCATTAGCATGTCAAAGAATAAGCTTCATTTACACTGTGAGGACTGTATTTGAAGTC-------AATGGTGTGGTACTCTGGAGGCAGCTGAAATGCGTGCTGTTATTCCAGATGTGCATTGTCTCTACTGAAATACAATTTTGCAGTCATTAAACCTGTTAAGTCCATCAAGAGATAAGTATAGCCTAAAGCCTGTCAG-ATGTGCTTCAAAATCTTA----ACAAAAGATTTGCCTATTGATCAGCTAATTGATTTTTATTACCTAGGAATTGGACTGC chr4 + 94230402 52508662 52508661 52509245 52508662 52508661 52509245 584 CAGTTGGAAACAGTTATGTTTGTA-ATGAATTTCTTCCTTTTCTTCCTCTCTTTTCC---ATGTGATATCACAAAGCAACTTTTCACTGGAGCCCTTGTAGCCTTCAGTGGGTTGATTGGTCACCGAGTTCTTTGTCTCTCATT----TACCCCAG---TCTGCCTTCATTCTGAGTATGAAGGTGAAGCTGAGATACGGGTCGTCCAGCACTCTGTCCACCACCAGGAGAGTA----TGTTCACACCTAAAAA--AGCAAACACTGTAGATGCTTAAAAGCATATTGTGAGCCCTCTGGATTTTGTCT-----GCTGTCAG---TGATTTGGGCT------------GATGTTAGCATGTCAAAGAGCCAGCTCCATTTTTGTGGTGGAAACTCGATTTGAAGTTTGTGTTTAATGGCGTGGGACTCCATAGACCTCCGAATGGCATGCTGTTATTCCAGATGTGCATTGT-----CAAGGAGACAATTTCACAGTGATTTAACATTTTAAGTTCGTCAAGTGCTAATTATAGCAGAAAGCATGACAGCAGAATCTTCAAAGCCTCAGTGGACAGAAAA---GCCTATTGATCATTCAGTTGATTTTTATTGCTT-GGTATTGAGCAGC ..x.....:.:::...x....x:.-.:::x........x.x.:x:.:...x......---..x.x.x.:x.x.x...x:..::..xx.xx:x.:...:x:..x..-------.x...::x:x.x.::.:x:..x:....x...x----...:.xx.---.:..:xx.x...xx:::.:xx........:x..:....x:.:xx.....:x---....:..:.----.:......----...x:.:x...x....--......::..::..xx:...x....:.:x::x:x::.x..:..:.x.......-----:...x...---.:.xx..:.x:------------.:::...............::x....:.....x:::x...:::...xx.........:-------.....:....x....::x..:.xx.:...xx..:.........................-----.x:::.x.......::....x...x...x.x......:.:.....x.x...x......xx.....x..x...-.x:xx.......::..:.----...:..:.---............x::.:............:.:.-..x....::.x.. 24M1D32M3D45M7I32M4D8M3D51M3I9M4I8M4D16M2D53M5D8M3D11M12D58M7I59M5D72M1I18M4I8M3D33M1D13M 368/558 65.9% 584/94230402 0.0% 72/558 12.9% 12189342 NA +3005 chr4 + 190214555 64700754 64700753 64700810 57 TTTTGTCTCTCTTTTGTTGTAGTTTTTATTTCTCTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 26257033 26257032 26257089 26257033 26257032 26257089 57 TTTTGTGGCTCTTGTCCTGTCTTTTTTTTTTTTTTGTGTGTGTGTGTATTTGTGTAT ......xx.....x.x:...xx.....x...:.:.............:.x...:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 38443721 NA +32155 chr4 + 190214555 64736725 64736724 64737531 807 AAAAGGAAAAATGCAATAAAAATACTAA-CAGCAAAACAAAAGAATTAGGTTGCATTTTTAGGAAAAAAATTAAAAGCAGGTGTTAAAC---ACAGAGAACATTTTTACTCCATATGTGCTGCCCAGTCAGAAACTATGAGAATAAA--------------AAATGTAACAATGAATTAACAAAGATAACTATAATCCACTTCTATCGACATCTATTAAGGTAAAA------CAACCACAACATCAACACTGAGATTAAAATTGACTTTGTAA---------TGCCATTTTTTGTTTCCATGAAATAAATTCAAAAATAGAGCCAAGAATAATTTGAACATTTATAGAATACATCAATGATACATCATTACCTAGATCTTCTTCAATTCAGTGATTTTAATTTTCTGTTGAACAAGTAGGGTTTATCAGAGAACTTAGCATCTGAATGTAACAGGG---GAATTGTAAAATGATTTCTTGAAATTTGCATGTCTTTGGCTCCTGAATAGCCATCAAAG-TAATTGTTTCTTAAATGTTATGCAAATCTTTTCTCCTGTGTTGACCCTAATCAAAGCAATTAATTCTATAATGATGTCTTTCTTTGCAGACACCATCTTATTATTATCTTGGCCTAAATTAATAACATCATGATAATAATTAGTAGATTTGAAATCATCTAT-TTATTTCTTACAGCATGTGGGCTCCTTATAAAAGAGCAACAGGAATGGAAATTAGAGTAAAACATGGCAGCTGTGTTGATTGGTGTGCCCTCCTAACCTTAGCACCTGCAACATCGGCCTTATTTAAATGTGAATGTGATGTGTTTGTAATAGTCTTTCCCTC chr4 + 94230402 52510035 52510034 52510852 52510035 52510034 52510852 818 AGAAAGCAAAGTGCATTTGAGATGAAAGGCTGCAAAGCCATG---TTCAGTTTCATTTAT-GGAGATGAATTAGAAACAGGTGTTTCACGTAACTGAGGG----------------GCACCATTCTGAGAGAGCCCTTGAGAGTCAAGAGAAAGAAATTACAAAGACAACAGTATATTCAGAAAGATAACTATAATCAAGCCCTTTCCGTGGCTATTAAGGGGAAAAGACAACAACCACAAATGCAATGGAGAGATTAAAATTGACTTTGTAAAAAGCCATTTTTTATTTTTTGCTTCTGTGAAATAATTTCAAAACCGAAGGCAGGAATAATTGAAGCATTCACAGAATATATCAATAATACCTCATTATCCAGCTTTGCTTCAATCCACTGATTTCAATTTTCTTTTGTACAAGCGGCATTTATCAGAGGACTTAGCATATGAATGGGAAGGGGGGAGAAATGTAAAATACAAGCTCCAGATTTACATGTCTTAGGAAGCCAAATGGCCCTCAAAACTAATTGTTTTTGAAATGCTTTATAAACCTTATCTTATGTGTTGACCCTAATCAGAGCAATTAATTTCATAATGAATTCTTCCTACATACACCCTATCTTATTAT--CCTTAGTCTAAATTAATAACATCATGATAATAATTAGCAGATATAAAATTGTCTTCACTACTTCTCATAGCATGTGGGCTCGATATAAAAGAACAACAAGGATGACAATTAGAGGAAAACATGTCAGTTGTATGGATTGTTGTG-CATCGTAACCCTACCATCTGCAAAATATGCTTTATCTAAATGTGAATTTATTTTTTTT----TATTCTTCCTGTC .:..:.x...:....x.x:.:..:xx.:-.x.....:.x.x:---..x:...x.....x.-...:.x:.....:..:........xx..---..x...::----------------.::.::::.x.xx...:x.:x.....:.x..--------------...x::....:.:x...x.x................x.x::..x..x:::x.........x:...------.........xxx...::xx......................---------.x::........:...::........x.......x:::..x..:........x:.:....:.:......:......:....x......:.:..x.:.x.......:..x......:........x...x.....::.x:..........:.........x......x:.x:...---...x........:xxxx..:x.:....:........x..xxx.::...:...x.....:-.........:.x.....:.x.::...:...x...:x.................:...........::.......xx....:..x:::.x..x.:..........--:...:.:..............................:....x.:....::...x:-:..:....:.:.............xx.........:.....:.:...:x........x........x...:...:.x.....x....-.x..x.....:..x..:......x..xx..:....:...........x.:x.x.x...----..x....:.:x.. 28M1I13M3D15M1D28M3I8M16D31M14I65M6I41M9I174M3I59M1I104M2D56M1I87M1D58M4D13M 578/780 74.1% 818/94230402 0.0% 65/780 8.3% 12226690 NA +3011 chr4 + 190214555 64741539 64741538 64741600 62 CAATGAACTCAAACATATTTACAAGAAAAAACAAACACCACCATCAAAAAGCGGGCAAAGGA chr4 + 94230402 66542893 66542892 66542954 66542893 66542892 66542954 62 CATTTATCTTAAATATGCATATAAAAGAAAAAAAACACCACCAACAAAAAGCAAACAAAAAA ..x.x.x..:...:..::x..:..:.:....x...........x........:::....::. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -1801354 -92429048 +3118 chr4 + 190214555 64742422 64742421 64742508 87 AATTAAAAAAATAAAATAAAATAAAGGATTACTGCTTCGACACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAA chr4 + 94230402 31372875 31372874 31372961 31372875 31372874 31372961 87 AATTAAAAAGTTAAGATGGCAAGAAGGAACCATTCCTCCACATAGTAAGCAAAGAAAAAGGAAAGAAAGACAACAAAGGAACCACAA .........:x...:..::x.x:.....x:xx.x.:..x...:..:..:x...:.....::...:...:....xx..:x..x..x.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 33369547 NA +3139 chr4 + 190214555 64742439 64742438 64742513 75 AAAATAAAGGATTACTGCTTCGACACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCC chr4 + 94230402 31527583 31527582 31527640 31527583 31527582 31527640 58 AAAGTAAAGTCTTACTCCTC-----------------AACAAGAAAAAGAAAACAAACAAACAAACAAAAAACCC ...:.....xx.....x..:-----------------..x..:.....:.......................... 20M17D38M 50/58 86.2% 58/94230402 0.0% 17/58 29.3% 33214856 NA +3498 chr4 + 190214555 64742439 64742438 64742511 73 AAAATAAAGGATTACTGCTTCGACACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAA-------CAAAAAAC chr4 + 94230402 78976501 78976500 78976578 78976501 78976500 78976578 78 AAAATCAATGA--GCTGCCTTGGCAATGCAGGAAAAAAAGAAAAGAAAAAAAACAACCAAACAAAAACAACCCAAAAAAC .....x..x..--:....:.:.:..xx...::.......:....:...........x........-------........ 11M2D52M7I8M 58/71 81.7% 78/94230402 0.0% 9/71 12.7% -14234062 -79996340 +3498 chr4 + 190214555 64742439 64742438 64742511 73 AAAATAAAGGATTACTGCTTCGACACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAA-------CAAAAAAC chr4 + 94230402 78971742 78971741 78971819 78971742 78971741 78971819 78 AAAATCAATGA--GCTGCCTTGGCAATGCAGGAAAAAAAGAAAAGAAAAAAAACAACCAAACAAAAACAACCCAAAAAAC .....x..x..--:....:.:.:..xx...::.......:....:...........x........-------........ 11M2D52M7I8M 58/71 81.7% 78/94230402 0.0% 9/71 12.7% -14229303 -80001099 +3255 chr4 + 190214555 64742463 64742462 64742542 80 ACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCCTTCACTGGTGATATCAAAATC---TGGGCCAG chr4 + 94230402 70765579 70765578 70765661 70765579 70765578 70765661 83 ACTACAAAAACAAACAAGCAACAAAAACCCAATCAAACAAACAAAAAACCCTTTAATATTAACATGAGGCTCCTGTGGGACAG ..x:......x...x..:x..x.....xx...x....................:.x.:x.:.:..x.::x..---....x... 72M3I8M 59/80 73.8% 83/94230402 0.0% 3/80 3.8% -6023116 -88207286 +3107 chr4 + 190214555 64742474 64742473 64742517 44 AAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCCTTCA chr4 + 94230402 84399835 84399834 84399878 84399835 84399834 84399878 44 AAAAATAAAACAACAAAACAAACAAACAAAAAAAAAACCTTTCA .....x....x..x................x........:.... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -19657361 -74573041 +3154 chr4 + 190214555 64742475 64742474 64742513 39 AAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCC chr4 + 94230402 75561895 75561894 75561933 75561895 75561894 75561933 39 AAAAAAAAGAAAGAAAACAAACAAACAAACAAAATACCC ........:...:.....................x.... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -10819420 -83410982 +17062 chr4 + 190214555 64796520 64796519 64796941 422 AACTTACGTTAGCCTGCCAGGGCCTAATTCATAAAATATTTCTAACACCACAGATTAGTTCTGAGCCATTTTAAAGCTTCGGAAAGTC---TATACCATAAAGGATGCTCCCTTTCATTCCAAATCTATTTGCATTTTATTTGTGCCTCAAAGGAGGAACAATCCAAACTGATTAGAATCTGCAGACACTGTGCATAATGAAAAATTAATTGCATCAATCTTTTCACTGTAGTGGTCTTAACAACTCATTTTCAACTGGTCATTTTTCCACCTGCTCACCAGGGCCCAGGCAGCTGAGGCGAGCATAACTGTGACATTTGCAGAATATCAATGAAGCTAAGGTCACCAGTATATCATGCAAGTGAGAGCTGAGAATCCTGAAAGAGATGTAAGCTGTTTGGATGAGCTAGAACTATTATGTGACA chr4 + 94230402 52519761 52519760 52520175 52519761 52519760 52520175 415 AGCTTATATTAATTTCTTCTGGGTGGATTCATAAAACATTCCTCATAATCCCCATTTACTTCAAGCCGTTTTGCTGCTCTGAATAGCACAGTATCTCATAAAGAACGTCTCCTTTCATTCAAAAAACATTTGGATTTTATTTGTGCCTCAGAGGAAGAAGAATCCGAGCTGATTACAATAGAGAGACACTGTACATAATGAAAAAATAATTGCTTCAAATGTTTTGCTGTGGTGGTCTTAACAACTCTTTTTCAATTGGTCATTCCCTCACCT---------GGCCCAAGCAGCTGAAGCAAGCACATTTCTGACACTGATTGAATACCTATGAAGCTGAGATCACCTA-ATGTCAACGGTGTGGTAGGATAGCACTCAGAGGAAGATGTCAGCAGTTTGGATCAGCAGCAATCCCTATGTGATA .:....::...:::.x::xx..x:x:..........:...:..x.:.x:x.xx...x::.:::....:....:xx...::.:.x..:x---...x:.......:.:.:::..........x...xx:.....x.................:....:...x.....:.:.......x...xx:x.........:............x.......x....x:x...::....:................x.......:........::::.....---------......:........:..:....:.x:.x.....:.x::x.....:.x........:..:.....x:-..:...xxx:x...:x..xxx..x.::.x..:::......x...x........x...x:x..::x:.......:. 88M3I182M9D67M1D75M 288/412 69.9% 415/94230402 0.0% 13/412 3.2% 12276759 NA +3966 chr4 + 190214555 64806340 64806339 64806518 179 CTTTTATGGACA-----AGAATTCTTTTCTTTTTCTTTTCTTTTCTTTTCTTTTC------------------------TTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTC----------TTCTCCTTTTCTCTTCTCTCTTCTTCTCTCTTCTCTTTTTCTCTCTTCTCTCTTCTTCTTTCTTTTCTTTTCTTTTCTTCTCT chr4 + 94230402 61081186 61081185 61081403 61081186 61081185 61081403 218 CTATTATGAATATTAAAAAAACTCTTTTCTAATTCTCTTTTTATGCCTTCTTCTCCCCTCAGATTTCCTTTGCCTAATCTTATTTCTGTTCTTTTTTCTTACTACTTTGCCTCTATTTCCTTCTAAACTAACCTGCTTTCCCATCACCTGCTCTATTCTGCACTAATTTATTTTTCATTTCCAGCAGTTCCTTCCTCCCTTCTAGCCCTCACTTCTCT ..x.....:.:.-----.:..:........xx....:..:..x.x::.....:..------------------------..x.....x............x::x...:x.:...x..::.....x----------:.:...:x.:x:..x....x....x.x..xx.:.x......x:.:::xx.xx...:.:::..::....xx:.:.:x....... 12M5I38M24I46M10I83M 116/179 64.8% 218/94230402 0.0% 39/179 21.8% 3725154 NA +3287 chr4 + 190214555 64806341 64806340 64806461 121 TTTTATGGACAAGA-------------ATTCTTTTCTTTTTCTTTTCTTTTCTTTTC--TTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCTTC chr4 + 94230402 8132128 8132127 8132263 8132128 8132127 8132263 136 TTTTAAAGACAAAATGGATTTTGAGAGGTTCCTCGGTTTTTCTCATTTATTCCTTTGAGTTTCCTTTTTGCTTTTTTTTTTTCCTTACTCTTCAATGTCTGTTTTGGCACCTGACCTATTCTCTCCAATCTTTCTC .....x:.....:.-------------:...:.:xx.......:x.:.x...:...x--...:......x.....:.......:..x......xx.x:::x.:.:xx.x.:.xx...x......:.xx....::.. 14M13I30M2I77M 81/121 66.9% 136/94230402 0.0% 15/121 12.4% 56674213 NA +3232 chr4 + 190214555 64806348 64806347 64806414 67 GACAAGAATTCTTTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCT chr4 + 94230402 71751212 71751211 71751278 71751212 71751211 71751278 67 GACAGGTATTCTTTTCTTTCTGTTTTTTTTTTCCCCCTATTTGTTTGTTCTTTCTTTTAACTTCTCT ....:.x............:.x....:....:::::..x..:x...x.::........xx...:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -6944864 -87285538 +3039 chr4 + 190214555 64806375 64806374 64806446 72 TTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTC chr4 + 94230402 27870674 27870673 27870745 27870674 27870673 27870745 72 TTTTCTTTTCTTTTTTTTTGCATTTTCTATTTCTTCCACTTTTATAACCTCTTCTTTACTAATAACCTTTTC ..............:....x:x......x...::.::x..:..x.xx:.......:.x..xx.xx....... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 36935701 NA +3070 chr4 + 190214555 64806381 64806380 64806449 69 TTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCT chr4 + 94230402 24076884 24076883 24076952 24076884 24076883 24076952 69 TTTCTTACATATTTTCTTTTATCTCCTCTTTTCCCTTTACTTCTCTTGTCCCCAAATATTCTTCTCTCT ......x:x.x.........x.:.::.......:...:x........x..::.xxx.x.:...:..... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 40729497 NA +3026 chr4 + 190214555 64806382 64806381 64806457 76 TTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTT chr4 + 94230402 85977474 85977473 85977549 85977474 85977473 85977549 76 TCTTTTTATTGTTTCTTTTCTTTTTACTCTTTTTAACATTTTTTTTCTAACCACTTCCCATTTTTTGTGCTCTTTT .::....x..x..............x..:..:.:xx.x:..:.:....xx:.x....:.x....:.x.x....:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -21171092 -73059310 +3395 chr4 + 190214555 64806421 64806420 64806495 75 TTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCTTCTCTCTTCTCTTTTTCTCTCTTCTCTCTTCTTCTT chr4 + 94230402 92183520 92183519 92183594 92183520 92183519 92183594 75 TTCTTTCCTCTTCTTTCCTCCTTTCCTCCTCTCTCTTTGACTCAAGTTTTCTCCGTTCTTCTCGCTCTGCTTCCT ....:.:.......:.:.......:...:........:xx...xxx.:.::.::x:...::..x....x....:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -27377099 -66853303 +3015 chr4 + 190214555 64812655 64812654 64812713 59 AAAACTTAATTTCCAAAAATTTGATTTTTTACTTCTTTTCTCTTTTTTTTTTTTTTTCT chr4 + 94230402 71721943 71721942 71722001 71721943 71721942 71722001 59 AAAATTTAATAGCTAAAACCCAGAGTTTTGACTTCATTTTACTTTTTTTTTTTTTTCCT ....:.....xx.:....x::x..x....x.....x...:x...............:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -6909288 -87321114 +3206 chr4 + 190214555 64812655 64812654 64812715 61 AAAACTTAATTTCCAAAAATTTGATTTTTTACTTCTTTTCTCTTTTTTTTTTTTTTTCTTG chr4 + 94230402 71719935 71719934 71719995 71719935 71719934 71719995 61 AAAATTTAATAGCTAAAACCCAGAGTTTTGACTTCATTTTACTTTTTTTTTTTTTTTCCTG ....:.....xx.:....x::x..x....x.....x...:x.................:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -6907280 -87323122 +3339 chr4 + 190214555 64820203 64820202 64820260 58 ATAATTATTAA-TTTAATTTATTCAATAGTTGTAGGCATATTCACATTGTTTATTTCTT chr4 + 94230402 22465859 22465858 22465917 22465859 22465858 22465917 59 ATAAGTATTAAATTTAACTTGTTCATTAATTGCAGGCATGTACACATTGTTTATCTGTT ....x......-.....:..:....x..:...:......:.x............:.x.. 11M1I47M 48/58 82.8% 59/94230402 0.0% 1/58 1.7% 42354344 NA +4800 chr4 + 190214555 64832296 64832295 64832514 219 GCAACAGTTTGACTTCCTCTTTACCGATTTTCTTTTTCTTTCTTTTCTTTCTTTCCTTC---------------------TTTCCTTCCTTCC-------------TTTCTCCTCTTTCTTTCTTTCTTTCTCTT----------TCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 7632458 7632457 7632720 7632458 7632457 7632720 263 GCAGAAGTAAAACTTCTACTCTACTAATTCATTTTTGCTCAATCATTTTTCTTTTCTTCATTGTCTCTTGACCATATAAGTCTCCTTTCCTCTACCCCAGAGATAGTTTCTCATTTCTCTTACTTCACTTCTTGTGATATGTGTGCCCTTCCTTCTGTATCTAATTCTTTCTATGTCACATACATTCTGTCTTACTGACCCCCCTCTGCTCTTTCTTTTCATGCTCTGCTCTTTCTTTTAATGTCCTGATTGACTTCTTTCCT ...:x...xx:.....:x..:...::...:x:....x..:xx.:x.:.......:....---------------------.:.....:.:..:-------------......x.:.:....x...:x:....:x.----------:.:...:....x.x...xx........x.x.:x.x.x.x....x....x..xx::.:::::.x........:..:x.x:::.x........:..xx.x..:.xx..xx:.......:. 59M21I13M13I29M10I118M 140/219 63.9% 263/94230402 0.0% 44/219 20.1% 57199838 NA +3697 chr4 + 190214555 64832303 64832302 64832529 227 TTTGACTTCCTCTTTACCGATTTTCTTTTTCTTTCTTTTCTTTCTT----------TCCTTCTTTCCTTCCTTCCTTTCTCCTCTTT--------------CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTT---CTTTCTCT-----TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215308 19215307 19215566 19215308 19215307 19215566 259 TCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:..x........:.:::.:.xxx:....x:...x.......x:.x----------.:.:x.....x.:::..xx:x.x.:...::.--------------.:::..::.:::.:.:..:...:...:..xx.::.xx:xx......x..::...x.....:xxx....x.x.::.:.xx::.....:.x.......---.x.:..:.-----.......xx:..:.....x:...x:x..:..::x.:..:.x.:... 46M10I31M14I96M3I8M5I46M 134/227 59.0% 259/94230402 0.0% 32/227 14.1% 45616995 NA +5139 chr4 + 190214555 64832308 64832307 64832586 279 CTTCCTCTTTACCGATT--TTCTTTTTCTT----TCTTTTCTTTCTTTCCTTCTTTCCTT-CCTTCCTTTCTCCTCTTTC----------TTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTC-TTTTTCTTTCTTTCTTTCTTTCTT-----------TCTCTCTTTCTCT-------------TTCTTTCTTTCTCTTTCTC------------------TTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCT---TTCTTTCTTTTTCTTTCTTTCTCTTTCTCTTGTCTA chr4 + 94230402 7632380 7632379 7632721 7632380 7632379 7632721 342 CTTCATCCCTACTGTCTCATTCCTTTTATTAATTGCTCTGCTTTTTTTCCTTCTGCCTTTTCCTGCCTTTCTTTTTCTGCAGAAGTAAAACTTCTACTCTACTAATTCATTTTTGCTCAATCATTTTTCTTTTCTTCATTGTCTCTTGACCATATAAGTCTCCTTTCCTCTACCCCAGAGATAGTTTCTCATTTCTCTTACTTCACTTCTTGTGATATGTGTGCCCTTCCTTCTGTATCTAATTCTTTCTATGTCACATACATTCTGTCTTACTGACCCCCCTCTGCTCTTTCTTTTCATGCTCTGCTCTTTCTTTTAATGTCCTGATTGACTTCTTTCCTA ....x..::...:.x:.--...:....x..----x..:.x....:.........x:.:..-...x.......::.::.x.----------:....x:::.x..xx...x..:..x..:xx..-.........::...x..x.:....-----------....::..:....-------------..::.:x........x..:------------------.x:.:...:....x.x...xx........x.x.:x.x.x.x....x....x..xx.:::.:.::x:...........x.x..---:..........xx.x..:.xx.:xx::....x:... 17M2I11M4I26M1I19M10I32M1I24M11I13M13I19M18I82M3I36M 187/279 67.0% 342/94230402 0.0% 63/279 22.6% 57199928 NA +3077 chr4 + 190214555 64832360 64832359 64832463 104 TTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCT------------TTCTCTTTTTCTTTCTTT--CTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCT chr4 + 94230402 32895602 32895601 32895719 32895602 32895601 32895719 118 TCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTT .::.:..:..::....x...:..:..x..x......x.x...::.x..------------x....:.:x:......:.--.x......x............xx..:x:x.x....::. 48M12I18M2I38M 71/104 68.3% 118/94230402 0.0% 14/104 13.5% 31936758 NA +4161 chr4 + 190214555 64832367 64832366 64832485 119 CTTTCTCCTCTTTCTTTCT--TTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTC--TTTCTCTTTCTTTCTTTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.:.:::.:.....:--.x:.........:....:.:x..::...x....xx.....x.:.:xxx.:..:x..:....x.xx.......:..:.--:..:........:....:.x... 19M2I77M2I23M 81/119 68.1% 123/94230402 0.0% 4/119 3.4% 1135250 NA +3392 chr4 + 190214555 64832371 64832370 64832505 135 CTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697108 63697107 63697239 63697108 63697107 63697239 132 CTCCACAGACTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.xxx....x..:..:..-.....:xx:x..:.:...:......:.:x..::.:.x....xx...:.x.:.:xxx:::..x....:..x:xx......--...::.:::..:........:....:.x.:. 22M1D79M2D31M 82/132 62.1% 132/94230402 0.0% 3/132 2.3% 1135263 NA +3284 chr4 + 190214555 64832383 64832382 64832476 94 TCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTT--CTTTCTCTTTCTCTTTCTTTC chr4 + 94230402 32895607 32895606 32895702 32895607 32895606 32895702 96 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ........:..x...:..:..x..x......x.x.:..::x:.xx....x..xx:x....:.:x:......:.--.x....:.x.:...:...... 73M2I21M 64/94 68.1% 96/94230402 0.0% 2/94 2.1% 31936776 NA +4012 chr4 + 190214555 64832384 64832383 64832509 126 CTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCT--CTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:...:...:....:.:x..::.:.x....xx.....x....xxx:::..x..:....x.xx.......:..:.:.--::..........:....:.x.:. 13M1D87M2D23M 82/123 66.7% 123/94230402 0.0% 3/123 2.4% 1135267 NA +4023 chr4 + 190214555 64832394 64832393 64832517 124 CTTTCTTTCTTTC-TTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTT--TTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx.x..:.:.....:....:.:x..::...x....xx.:.:.x....xxx.:..:x...--....x:xx.........::.:.::..........:....:.x.:. 13M1I64M2D45M 82/122 67.2% 123/94230402 0.0% 3/122 2.5% 1135277 NA +3314 chr4 + 190214555 64832405 64832404 64832512 108 TCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTT--TCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCT-----ATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x....:.:..::...:.-----x...:..:..x..x......x.x...::.x..xx....x.:--:x.:..:.:x:........x:.x......x.....:...... 20M5D41M2I42M 71/103 68.9% 105/94230402 0.0% 7/103 6.8% 31936807 NA +3315 chr4 + 190214555 64832429 64832428 64832524 96 TCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895607 32895606 32895702 32895607 32895606 32895702 96 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ........:..x.:...::..x..x....:.x.x...:::x:.xx....x..xx:x....:.:x::.:.:...x:.x......x.....:...... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 31936822 NA +3042 chr4 + 190214555 64832433 64832432 64832528 96 TCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895607 32895606 32895702 32895607 32895606 32895702 96 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .......::..x.:.:..:..x..x......x.x.:..::x:.xx....x.:xx:x.:..:.:x::.:.:...x:.x......x.....:...... 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 31936826 NA +3015 chr4 + 190214555 64832443 64832442 64832486 44 TTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTC chr4 + 94230402 68448597 68448596 68448640 68448597 68448596 68448640 44 TTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTC ......:.:.::.x...:.....:.............:...... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% -3616154 -90614248 +3817 chr4 + 190214555 64832444 64832443 64832566 123 TTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCT-TTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTT------GTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:::.:.....:xx:x:.........:....:.:x.::....x....xx.....------x....xxx:::..x....:.:x.xx.......:..:::...-.........:......x... 56M6D41M1I20M 79/117 67.5% 118/94230402 0.0% 7/117 6.0% 1135322 NA +3208 chr4 + 190214555 64832451 64832450 64832533 83 TCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......:::.x..:..x..:.:...:::.:..:xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 7460424 NA +3066 chr4 + 190214555 64832455 64832454 64832537 83 TCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.....:..::.x.::..x..:.:..::.:.::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 7460428 NA +3613 chr4 + 190214555 64832505 64832504 64832595 91 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCTTGTCTAACTGACCTA chr4 + 94230402 3394726 3394725 3394816 3394726 3394725 3394816 91 TTTCATTCATTTCTATTCTTTCTCTTTCATTGTTTTGATTCTTCTTTACTTTTTTGGTGCTTTTTCCTCTTTCTATTGCCAAACTGATATA ....x...x..::.x:.:.:.:......x..x...:xx.....::..x....:..xx.x:..:..:........x...:.x......:x.. 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% 61437779 NA +3048 chr4 + 190214555 64832513 64832512 64832570 58 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 86518997 86518996 86519054 86518997 86518996 86519054 58 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ......:.:.:.:.:::..x....xx.:........:...:...........x::... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -21686484 -72543918 +3614 chr4 + 190214555 64834368 64834367 64834460 93 TTTATATATACGTATATGTAGAGAGATATGTGTGTGTGTGTATATATATATACACACATATATATCTACATATGTATACATATATACATATAT chr4 + 94230402 85834531 85834530 85834615 85834531 85834530 85834615 85 TTTATTCATTTGTGTCTGTG--------TGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x:..x:..:.x...:--------...............xx..:..x:..:......:..xx.....:.x...:..:.:.....:.:.. 20M8D65M 62/85 72.9% 85/94230402 0.0% 8/85 9.4% -21000163 -73230239 +3005 chr4 + 190214555 64834660 64834659 64834706 47 TACATATAAGTATACATATATGTATATATATACACATATACACATAT chr4 + 94230402 41650583 41650582 41650629 41650583 41650582 41650629 47 TACATTTCATTAAACATATATATATATATATACACACACACACGTAT .....x.x.x..x........:..............:.:....:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 23184077 NA +3005 chr4 + 190214555 64834752 64834751 64834798 47 TACATATAAGTATACATATATGTATATATATACACATATACACATAT chr4 + 94230402 41650583 41650582 41650629 41650583 41650582 41650629 47 TACATTTCATTAAACATATATATATATATATACACACACACACGTAT .....x.x.x..x........:..............:.:....:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 23184169 NA +3369 chr4 + 190214555 64834786 64834785 64834919 134 CATATACACATATATCTACATATATATCTACATATGTGTATATATACACATATATATCT------------ACATATACATATACACACATATATACACATATACATATATACACATATATACACATATCTATACATATATACACA chr4 + 94230402 25906314 25906313 25906459 25906314 25906313 25906459 146 CATATACTCACAATCTTGAAAATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA .......x..:.xx::.:x.x....x:xx....:x:.:.x:x:...xx..x.x...:..------------......x::.x.:..:....:..x..::::.:..x.x...x..:.....x......:::........xx...:.. 59M12I75M 84/134 62.7% 146/94230402 0.0% 12/134 9.0% 38928472 NA +3113 chr4 + 190214555 64834840 64834839 64834908 69 TATCTACATATACATATACACACATATATACACATATACATATATACACATATATACACATATCTATAC chr4 + 94230402 54963193 54963192 54963261 54963193 54963192 54963261 69 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .:.x..:x:.....x..:.....x..........:.:...xx:.::::.::x:.......:........ 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 9871647 NA +3030 chr4 + 190214555 64834925 64834924 64834977 53 ACATATATACACACATATATATATACACATATATATACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .::.:.:..::....:.:..x...:x......:..:.....:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 41587203 NA +16318 chr4 + 190214555 64847759 64847758 64848049 291 TTGGATAAAATAAAATAGTATAAGAAAACTGCAGTTCAAATTGTGGTCTAAAATGATGGATGACTATATTTGTTCCAGTACTTCAGGGATGGATTAAGCTATTGAAAAAGCACTCAACATTGGGTAAGGAACAGTAATATATGTGAAATTCTACAGTTAATGCATCATTAAATAATTTGTTGTGACTGATTTATAGGTGCAATATACTACATGGTGTCAAACAGTGCAATATAATAAATGGTAT--AAAAAATATACTCCCAAAATTGTTGTTATAGTCAGTCTTTTAAGTTT chr4 + 94230402 52522503 52522502 52522785 52522503 52522502 52522785 283 TTTAATAAAACAAAA-AGAGCAAAAAGA---------AGACTCTGCACTCTGATGATGGATGAATATGCCTGTTTTGGTACTTCTGGGATGGATTACGCTATTGAAAAACCATTCAACATTGGCTAAAGAACTGTAATATATGTGAAACTCCACAGTTAATGCATCATTAAATAATTTGCTGCAACTGATTTATAGGTGCAATATACTACACTGTGTCAAACCATGTGGGATAATAAATGGTATCACAAAAATATACTATTGAAACTTTTGTTCTAATCAGTCTTTTGAGTTT ..x:......:....-..x::..:..:.---------.:.:.x..xx..xx:...........x...:::....:::.......x...........x............x..:..........x...:....x...............:..:...........................:..::...........................:x.........x:..:::x..............--x...........x:::...:.x.....x..:..........:..... 15M1D12M9D207M2I47M 228/281 81.1% 283/94230402 0.0% 12/281 4.3% 12325256 NA +3211 chr4 + 190214555 64868744 64868743 64868820 77 TACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACAT chr4 + 94230402 30232993 30232992 30233060 30232993 30232992 30233060 68 TATGCATTTTTATATACA---------GTATGCACATATACATATACATGTGTGCGCATGTACACAGACATGTTTAT ..::...x.x.:..:...---------.:...:.:..............:....:.......:.:.x....:.x:.. 18M9D50M 51/68 75.0% 68/94230402 0.0% 9/68 13.2% 34635751 NA +3457 chr4 + 190214555 64868768 64868767 64868848 81 TGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACAT chr4 + 94230402 30232993 30232992 30233060 30232993 30232992 30233060 68 TATGCATTTTTATATACA-------------GTATGCACATATACATATACATGTGTGCGCATGTACACAGACATGTTTAT .:.....x.x........-------------.:...:.:..............:....:.......:.:.x....:.x:.. 18M13D50M 54/68 79.4% 68/94230402 0.0% 13/68 19.1% 34635775 NA +3208 chr4 + 190214555 64868824 64868823 64868884 61 TGTGCATGTATATATACATATACATATGTGTATGTATATATACATACACATATATATGTGT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x.x.....::.......:....:.........:...x:x...::..:.:.:...:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 9174376 NA +3005 chr4 + 190214555 64868859 64868858 64868907 49 ATATATACATACACATATATATGTGTATATGTATATATACATACACATA chr4 + 94230402 27759113 27759112 27759161 27759113 27759112 27759161 49 ATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA ....:..:x....x.:.:.............:..:......::....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 37109746 NA +3552 chr4 + 190214555 64868930 64868929 64869003 74 TACACATATATGTGTATGTATATATACATATACACACACATATATGTGTATATGTATATATACATACACATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ..:......-.....:..x...:.....:...:....xx......x...::.........:.x:..:::.:.:. 9M1D64M 54/73 74.0% 73/94230402 0.0% 1/73 1.4% 8001639 NA +11594 chr4 + 190214555 64870434 64870433 64870877 444 AAATACTTCAAACCAGGAAAACATATAA----CAGCTCAGGTCTTATTTTAAAGTATCTTTTTCCCGACCCCCTGAAAGACAGATAATGCTAGTTTATTGTTTTTCTTCTTGAAATCTTCTTCTTATACATACAGTCAACTTCAGGCACTAGATTGTCTTATAAATATTAATTTATAGTTAATTAGTCGTTTT---------------------------------ATTTGAAAGAATGCTAAAAATGTCTGGTCTGTCAAAGCATGCATAATAATTATAAGTAAACGCACCTTCACAGCCTTCATAAAGAAATGATAGTTTAATCTTAGTACTGTCACTTCTTATTGGAATGGATGATTCCTGGCAGCTCTGTGTCAAAACGAGTTGTCAGAGGGGATTACTTCAAAGA--CTCAGGTTC--CTAATTGACAAAACAATAAGACAGAAAGACAATCCACAGTTCAATGCATAGCCCCATTTATA chr4 + 94230402 52527106 52527105 52527553 52527106 52527105 52527553 448 AGATACTTCGAAC----AGAATGTTTAGGTGTCATCATCAGTTTTGTTTTGAA---TACTTTTCCC----------ATGAAAGAGATCGCTA----------TTCCTTTAAGGAATGATCTCTCACTGAAGACAGTCAAATCTAGCCATTCATCTACCTCATAAATATTAATTCACAGCTACAGAGTTGTTTTTTTTTTTTTTTTTTGGTGGTGGTGGTGGTGGTAATTTGAAATTGTGTTACAAATGCCTGGCCTGTCAAAGCCTGCATACTAATTGTAAGTAAATGTGACTCCTC-GTCTTTATAAGGAAATAATATTTTAATCTCAGGACTGTCACTTTACATTGGGAATGATGAAGGCTGACAG--CGGTGTC-AAACAGCTCATCACAGCTGA-TACTTCAAAGGCTCTCAAGCTTGGTTAATTGGTGAAACAGTAAAATAAGGAGACAATCAACAG-----TGAATGATTCCGTTTGTA .:.......:...----.:..::.x..:----..x.x:x:..:..:....:..---.x:.......----------.x..x...x.x:....----------..:...:xx.:...xx...:::xx.:x.x........x.::..x..:.x:x:.::..:.............:.:..:..xxx...:.....---------------------------------........xx:..:..x.....:....:..........x......x.....:........:.::x..:.x.-.:...:....:.....:...x........:..x..........:x:.....:.xx.....xxx...:...--.x.....-....::x.::...x..xx..-..........:--....:.:.:--:......:::.....:...:.:.:::........x....-----..x..::::..:...:.. 13M4D11M4I21M3D10M10D16M10D91M33I71M1D70M2D7M1D20M1D11M2I9M2I39M5D18M 287/407 70.5% 448/94230402 0.0% 78/407 19.2% 12343328 NA +3093 chr4 + 190214555 64888247 64888246 64888315 69 AAATCTTAAATTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAATAAATAA chr4 + 94230402 36796851 36796850 36796919 36796851 36796850 36796919 69 AAATCTTCAATATTTAAAAAAACAAAAGAAAGTTTTAAGGAAAAAAAAAAAAGGAGGCAAAAGAAGCAA .......x...x.x........x....:...:xxxx..::............::.:.x....x..::.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 28091396 NA +3006 chr4 + 190214555 64888258 64888257 64888316 59 TTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAATAAATAAA chr4 + 94230402 4792646 4792645 4792704 4792646 4792645 4792704 59 TTGGGAAAAAAAAAAAACAACAACAAAAAACAACACAGAAGAGAAAGGTAATAAATAAA ...x:............x..x..x......x..x.x.:..:.:..:.:x.......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 60095612 NA +3132 chr4 + 190214555 64900828 64900827 64900872 45 AAAAATTAAAAAAAAAAAGTTAAAAAAAAAAAAAAAAGAAAACAG chr4 + 94230402 45195697 45195696 45195741 45195697 45195696 45195741 45 AAGAATTGAAAATAAACAGTTAAAAAAAAAAAAAACAAAAAACAG ..:....:....x...x..................x.:....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 19705131 NA +3124 chr4 + 190214555 64936629 64936628 64936687 59 GCACTTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x.....::.........:.::........x.xx.x...x::........::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -11096577 -83133825 +3487 chr4 + 190214555 64966662 64966661 64966739 78 TATATATTTTAACTATTATAACAAGAAAAGAAAAAATTCTGTAAAATGCAAG-----GTTTAAGAGTTTTATGTTTTAGATCT chr4 + 94230402 42074415 42074414 42074497 42074415 42074414 42074497 83 TATATGTTTCACCTCTTAAAAAGAGAAAACAAAAAGTTCTGTAAAATACAAGTGAATTTCTAAAAATTCAGTGTTTTGGCTTT .....:...:.x..x...x..x:......x.....:...........:....-----x.:...:.:..:x:......:.x.:. 52M5I26M 58/78 74.4% 83/94230402 0.0% 5/78 6.4% 22892247 NA +3029 chr4 + 190214555 64999971 64999970 65000032 62 GAAAAAGAAAAATAAGAAAAGAAAATCATCCAAACCAAAAAAAAAAAAAAAAAGCACCACCA chr4 + 94230402 24202362 24202361 24202423 24202362 24202361 24202423 62 GGAAAGGAAAGGGAAGAAGGGAAGAACACCAACACCAAAGAAAAAAAGAAAAAAAACCTTCA .:...:....::x.....::...:.x..:.x.x......:.......:.....:x...x:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 40797609 NA +3039 chr4 + 190214555 65022597 65022596 65022666 70 CATGGTGGCGGGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:.:.........::........x.xx.x...xx:.:......::.:.. 10M2D58M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -11010600 -83219802 +3015 chr4 + 190214555 65022731 65022730 65022781 51 CTGTCTCAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA chr4 + 94230402 23965212 23965211 23965262 23965212 23965211 23965262 51 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTA ....x...:.::............:.xx.:...........x......x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 41057519 NA +3192 chr4 + 190214555 65022737 65022736 65022790 54 CAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATGTATATAA chr4 + 94230402 1495003 1495002 1495056 1495003 1495002 1495056 54 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ..:.........x.:......x........:.:..:...:.....x:...::.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 63527734 NA +3040 chr4 + 190214555 65022738 65022737 65022789 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATGTATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:....x..........:.:..:...:..:..x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 63527738 NA +3186 chr4 + 190214555 65022740 65022739 65022788 49 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATGTATAT chr4 + 94230402 1495004 1495003 1495052 1495004 1495003 1495052 49 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT .:.........x.:...............:.:..:...:....:x.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 63527736 NA +3593 chr4 + 190214555 65044940 65044939 65045009 70 CGTGGTGGTGCATGCTTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........:.--....:.:...........:.........x.xx.x...x::.......:...:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -10988257 -83242145 +3197 chr4 + 190214555 65065950 65065949 65066031 82 CCATCTAATATATATATATGCAAATATATATGTGCAAATATATATATACA--CACACAAATATATATATACCTTTATCTACTTA chr4 + 94230402 29286185 29286184 29286266 29286185 29286184 29286266 82 CTATATCATATACATACACGCAGAGGCATATA--CAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTA .:..x.x.....:...:.:...:.x::....:--..:...x.x.x.....--.x....:.......:...:..x......:... 32M2D16M2I32M 59/80 73.8% 82/94230402 0.0% 4/80 5.0% 35779765 NA +3084 chr4 + 190214555 65088295 65088294 65088370 76 TCATTTTATATATATATGTATGTGTATATATATATGTATGTATGTGTATATATATATATATATATATATATATATA chr4 + 94230402 40388205 40388204 40388280 40388205 40388204 40388280 76 TCTCTTTAGTTTTGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA ..x:....xx.x.:.:.........x...x..:.......:..:...::...:.x..:.:..xx.:.:..xx.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 24700090 NA +3047 chr4 + 190214555 65088296 65088295 65088366 71 CATTTTATATATATATGTATGTGTATAT----ATATATGTATGTATGTGTATATATATATATATATATATATATA chr4 + 94230402 46063291 46063290 46063365 46063291 46063290 46063365 75 CATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .....xx:...:..:....::...:...----.:..:.x:........x......:......:xxx.......:. 28M4I43M 52/71 73.2% 75/94230402 0.0% 4/71 5.6% 19025005 NA +3044 chr4 + 190214555 65088310 65088309 65088376 67 ATGTATGTGTATATATATATGTATGTATGTGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..::.......:..:.:....x::::....x:..:...:.x......:......:xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 19025011 NA +3045 chr4 + 190214555 65088311 65088310 65088365 55 TGTATGTGTATATATATATGTATGTATGTGTATATATATATATATATATATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ......::..:...:.:....:...........x:x:..:..::.:.:....... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 9393857 NA +3100 chr4 + 190214555 65095525 65095524 65095586 62 TATATGTATAGTATATATATGTGGATATACATATAGGTGTGGATGTGTCTGTGTATATATGT chr4 + 94230402 32744969 32744968 32745030 32744969 32744968 32745030 62 TACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT ..:..x..:..x.....x..:::x.:.....:.:.......x......x.:.....:...:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 32350556 NA +3393 chr4 + 190214555 65097811 65097810 65097884 74 GCACACATGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGTATCGCTTGAACCTGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...:......:...........::.......:x.xx.x.x.x.:........::.:..x:xx:..:..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -10935393 -83295009 +19181 chr4 + 190214555 65102765 65102764 65103170 406 GAGGGAGAAAAAATAG---AAGTTAAAAAAATCCATGAAATATTTATGGGTTTTGCATGTATCTTTCTAATAAGAATGCAAATATTGTGAATTCTTTCTACTCATACAGTACTGACATTTACCAAATAGAATTCTGTTATTTGACCTCTTTCTGTAAACGTTGACATTGCACTCACATTTATAATAGATTTCTGTCTGTTTTACCACAGTTGAATGTTTCCATTGGGAATGTTATTACTTATTATGGCTCAAAATGCACCTGCACCAGCTGTACGACTAAACATAAAGAAGGCACCAGCCAAAATCCCGGAGACTCTTAACAGTCCTTTGCTGCATTACTGCCATAGATCCAACATCCATCCTGAAGCGGCAGGAAGGAA--ACTTCTCTAACACTTCAT-TTCCATAGAAA chr4 + 94230402 52550165 52550164 52550576 52550165 52550164 52550576 412 GAGGGGGCAAAGAGGGCTTGAGGTTGCAAAGCCTTCTTAATATTCAGGAGCATTGCAGGGACTGCCTGGACGTGAATGCAAATGCCAGTAATGCTTCCTCCTCCTCCAGAGCTGACATTTACTGAGCAGAGCTCTCTTCTTTGACCTCTCTCTGTAAACATTGACATTGCATTCACATGGATAATAGATTTCTGTCTGTTTTACCACAGCTGAATGTTTCCACCGGGAATGTTATTGCTTCTTATGGCTGGAAATGCACCTGCACCAGCTGTGAGGCTAAGCATAAAGCCCGTGCCAGCCCAAATCCCCAAGTCTCTTAACAGACCACAGCTGCCTCATTGCTGTGAAGCCTCCATTTATCTTGAGATGGCAGGAAAGAAATATTATCCCAACACTTCCTCTTCCTTGGGAA .....:.x...:.x:.---:..x.x:x...::.:x:xx......:.x.:.:x.....x.x.::x:::x:.::x..........::::xx...x...:..x...x.x...x:...........::.::...::...x..x..........:.........:...........:......xx.............................:............::............:...x........x:.....................:x.:....:.......xxx.::......x.......x:..x..........x..x:x.....x.:.:...::.::.x..xx...::...:...:::........:...--.:.x::.:........x.-....x.:.:.. 16M3I361M2I18M1I11M 295/406 72.7% 412/94230402 0.0% 6/406 1.5% 12552600 NA +3053 chr4 + 190214555 65103794 65103793 65103861 68 GTGGTAGCACGTGCCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGT-GCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .....-.......----....:........x..::........x.xx.x...x::...........:. 5M1D7M4D51M 51/63 81.0% 63/94230402 0.0% 5/63 7.9% -10929407 -83300995 +3147 chr4 + 190214555 65119225 65119224 65119343 119 TGTCTGTTCAAATCCTTTACCCATTTTTTTCATCTTTTTTGTGTGTGTTTGTTTTTGTTGTTGTTGTTGAGCTTTAGGTGTTCTTTTACATTCTGGATTTTACCATTTTGTCAGATACA chr4 + 94230402 4193355 4193354 4193472 4193355 4193354 4193472 118 TGTCT-TGCAAAGTCTTAACAAACCATTCTACTTTTTCTTGTGTGTATTTGTTTTACAGGTGACTTTTGATCCCGAGGTGTTTTTCAACATTTTGCTTCCTCCAATTATATTTTATGCA .....-.x....x:...x..xx.::x..:.xx.:...:........:........xxxx..x::.x....x.::x.......:..:x.....:..xx.::.x.x...x.:.:xx..:.. 5M1D113M 75/118 63.6% 118/94230402 0.0% 1/118 0.8% 60925870 NA +3320 chr4 + 190214555 65150234 65150233 65150291 58 TCTCAAAAAAAAAAAAAAAAACCATACATATATATATGTGTGTGTGTGTATATATATA chr4 + 94230402 60568556 60568555 60568613 60568556 60568555 60568613 58 TCTAAAAAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTATA ...x.....:.....x.:x::::............x.x.............:.:.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 4581678 NA +3162 chr4 + 190214555 65150254 65150253 65150310 57 ACCATACATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 46063296 46063295 46063352 46063296 46063295 46063352 57 ACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATAT .........:.:..:......:..x.:::..:.x:..:...:.x......:...... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 19086958 NA +3505 chr4 + 190214555 65150845 65150844 65150994 150 AGTCTTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCTTTCTTTCTTTCTTCTTTCTTTC---TTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215404 19215403 19215566 19215404 19215403 19215566 163 AACCCCCCCCTCCCCCCCCCCTT-TTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .::.:::.::..:.:.:...:..-...:...:...xx....-----......x..::...x......xxx....x.x..------::.:.:...x.......:x:.x.:....x---:.......xx:..:.....x:...x:x..:..::x.:..:.x.:... 23M1D17M5I33M6I29M3I47M 96/149 64.4% 163/94230402 0.0% 15/149 10.1% 45935441 NA +3871 chr4 + 190214555 65150846 65150845 65151006 161 GTCTTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCTT-TCTTTCTTTCTTT----------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 33237590 33237589 33237764 33237590 33237589 33237764 175 GTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCTTGGTCT ....:..:..::.:.x....x:..x...:xx.....--.:..x...:...:-...:..x:.x...----------:.....:::..x::..:xx...x.::....x.:..x....:...x....:.:x...:.:...::.:.:::x.....-.::.x....x.:...:.:xx... 36M2I13M1I13M10I76M1I23M 102/161 63.4% 175/94230402 0.0% 14/161 8.7% 31913256 NA +3103 chr4 + 190214555 65150847 65150846 65151034 188 TCTTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT------TTCTTTCTTTCTTTCTTTCTT---------TCTTTCTT------TCTTT---CTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCTTCCTTTCTTTT chr4 + 94230402 41518742 41518741 41518953 41518742 41518741 41518953 212 TCTTCCTCCTGCTGTTCTGTTATCTGCTGTTGACTCTCCCCCTTACTTTCTGATATATCATGTCGTTCTATTATTCTTAACACTGAATCTGTTTTAGACCATCCCTGGGATTTCACTTTTCCTCCTTTTTTTTTCTTTTTTTCTACCAGCTATTATTTTTGTCCAGATTATGTTCTAACCTAGTTTCGCTTCCCCCTGGCTTCGTCTCTTTT ....:..:::x..x.:.:x..x.:.x:.x:.xx..:..:::...x......------.:x.x..x....x.:x.....---------...x.:..------..::.---x....x::....:.:....:.:.......:.....x:.xx::x..x...:.x..:xxx..x:x....xx.:.xx...:x:...:....xx....x.:...... 51M6I21M9I8M6I5M3I103M 116/188 61.7% 212/94230402 0.0% 24/188 12.8% 23632105 NA +3111 chr4 + 190214555 65150847 65150846 65150944 98 TCTTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCT chr4 + 94230402 83326935 83326934 83327028 83326935 83326934 83327028 94 TCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTC------TCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:..:x...x.:x..::.x.......xx.:::.........------......x...--:.::x.....x.x..:..::x.::.........:...... 42M6D10M2I40M 64/92 69.6% 94/94230402 0.0% 8/92 8.7% -18176088 -76054314 +3197 chr4 + 190214555 65150847 65150846 65150929 83 TCTTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......:::.x.....x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 7778820 NA +3650 chr4 + 190214555 65150852 65150851 65151011 160 CTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCT chr4 + 94230402 19215407 19215406 19215566 19215407 19215406 19215566 160 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:::.:...:...:::.:..:...:...:..xx..::xx:xx......x..::...x......xxx....x.x..::::xx:.....:..x:..::...x:.x.:....xxxx...:::..xx:.:...::.x.:..x.x.:.....x..:.::x.:... 160M 90/160 56.2% 160/94230402 0.0% 0/160 0.0% 45935445 NA +3144 chr4 + 190214555 65150856 65150855 65151015 160 CTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCT chr4 + 94230402 19215407 19215406 19215566 19215407 19215406 19215566 160 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:.:.:.:.:::.:::.:..:...:...:..xx..::xx:xx......x..::...x......xxx....x.x..::::xx:.::..:..x:..::.:.x:.x.:....xxxx...:::..xx:.:...::.x.:..x.x.:.....x..:.:.x.:... 160M 86/160 53.8% 160/94230402 0.0% 0/160 0.0% 45935449 NA +3327 chr4 + 190214555 65150860 65150859 65151019 160 CTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCT chr4 + 94230402 19215407 19215406 19215566 19215407 19215406 19215566 160 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTT-TGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:...::..:::.:::.:..:...:...:..xx..::xx:xx......x..::...x......xxx....x.x..-..:xx:......:.x.:.....-.x:.x.:....xxxx...:::..xx:.:...::.x.:..x.x.:.....x.:..:.x..:.. 75M1I22M1D62M 94/159 59.1% 160/94230402 0.0% 2/159 1.3% 45935453 NA +3024 chr4 + 190214555 65150863 65150862 65151023 161 CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTC-TTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCT chr4 + 94230402 19215406 19215405 19215566 19215406 19215405 19215566 161 CCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTT-TGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ..:::.::..:::.:::.:..:...:...:..xx..::xx:xx......x..::...x......xxx....x.x....::x-:......:.x.......-.x:.x.:....xxxx...:::..xx:.:...::.x.:..x.x.:...::x.:...:x.::.. 81M1I17M1D62M 91/160 56.9% 161/94230402 0.0% 2/160 1.2% 45935457 NA +3243 chr4 + 190214555 65150866 65150865 65150983 118 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCT--TTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCT--TTCTTT---CTTTCTTTCTTTCTTTCTT chr4 + 94230402 6297115 6297114 6297248 6297115 6297114 6297248 134 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTT .....:..---....xx:.......x:...x.x.x....:.x..::..------......:--x.....x.:.......x.:x....:..x.....:..:x.x.--......---..xx....:...:...:.. 8M3I37M6I7M2I41M2I6M3I19M 87/118 73.7% 134/94230402 0.0% 16/118 13.6% 58853751 NA +3243 chr4 + 190214555 65150870 65150869 65150987 118 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCT--TTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCT--TTCTTT---CTTTCTTTCTTTCTTTCTT chr4 + 94230402 6297115 6297114 6297248 6297115 6297114 6297248 134 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTT .....:..---....xx:.......x:...x.x.x....:.x..::..------......:--x.....x.:.......x:.x....:..x...:....:x.x.--......---..xx....:...:...:.. 8M3I37M6I7M2I41M2I6M3I19M 87/118 73.7% 134/94230402 0.0% 16/118 13.6% 58853755 NA +3621 chr4 + 190214555 65150920 65150919 65151039 120 CTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCTTCCTTTCTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT---TTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx.x:.....:.:.:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx.......:.:.::...---..:...:...:......x... 65M6I31M3D21M 77/117 65.8% 123/94230402 0.0% 9/117 7.7% 1453803 NA +4165 chr4 + 190214555 65150924 65150923 65151043 120 CTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTTCTTTCTCCCTTCCTTCCTTTCTTTTTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:.:.::xx.x:.........:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....---x.:.:.:......:..:..:.......::.....x... 82M3I38M 78/120 65.0% 123/94230402 0.0% 3/120 2.5% 1453807 NA +3399 chr4 + 190214555 65150973 65150972 65151046 74 CTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCTTCCTT---TCTTTTTTTTTTTTTTTT chr4 + 94230402 69568192 69568191 69568271 69568192 69568191 69568271 80 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTT .....:..x:.x..---..x....:.:....x.:...::...x....::.....:x...---.................. 14M3I42M3I18M 58/74 78.4% 80/94230402 0.0% 6/74 8.1% -4417219 -89813183 +3133 chr4 + 190214555 65172363 65172362 65172401 39 CGTCTGAAAAACAAAACAAAACAAACAAACAAAAAAACA chr4 + 94230402 84790005 84790004 84790043 84790005 84790004 84790043 39 CATCCAGAAAACAAAACAAAACAAACAAACAAAAAAACA .:..:::................................ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -19617642 -74612760 +3204 chr4 + 190214555 65174085 65174084 65174134 50 AGTTTACTTTAGTTTAGGTTTTTTTTTTTTTTTTTTTTTTTGGTATCTTT chr4 + 94230402 65286681 65286680 65286730 65286681 65286680 65286730 50 AGTTTATTTTAGTTTAGGTGTTTTTTTTTTTTGTTGTTGTTGTTGTTTTT ......:............x............x..x..x...x.:.:... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -112596 -94117806 +3163 chr4 + 190214555 65209798 65209797 65209854 57 AATAGCCACAAACACACACACATATGCAAACACACACACAAAAAAAAACACCTGAGA chr4 + 94230402 67290033 67290032 67290089 67290033 67290032 67290089 57 AGTAACTATAAACATCCAAACAAACACAAACACACACACACAAAAAAACATTAGAGA .:..:.:.:.....:x..x...x.::..............x.........::x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -2080235 -92150167 +3146 chr4 + 190214555 65218757 65218756 65218877 121 AAGGAAAGAAAGGAAGGAACGAAGGA------AAGGAAGGAATGGAAGGAAGGAAGGGAAGGAAGGAAGGGAGGGTGGGAAGGAAGAAAGAAAAAGAAAGAAAAGAAAAACTAGAGGGAGTTATTTA chr4 + 94230402 3025730 3025729 3025856 3025730 3025729 3025856 127 AAAGACTGAGAGGCAATAATGTAGGCTTCAACAGATAGAGGGTGAAAAGAAAGATGGGAGGAGAAACACAAGGTGGGGGTAGGAAAGAAGGAAAAGGAAGCAAATTAAGTACAGGAAGGGTTATTTA ..:..xx..:...x.:x..:.x...x------.::x.::.::..:..:...:..x....:.::.::x.x:::.x.x...x.....::...:.....:...x...xx..:xx:..:::.:........ 26M6I95M 72/121 59.5% 127/94230402 0.0% 6/121 5.0% 62193027 NA +7038 chr4 + 190214555 65224221 65224220 65224456 236 CTAGTCTGGCTTATTGGTCATTTCCATAAAGATCTCTGAAGTGTGGATGATAAACTAGCAGGAGGAAGAGCTCTTGAATCAGCAGCCCCCAGCCCTCTCAACCTGCCAGCCTTGTGGTTGCTGAATGTTTTCCATTTCCCTAATGTATTTATCTGTTACACTTATGACCCCGGATTTAAATAGAGGGCTCTCACTGCTGGTCTTTGG--CCTCCAGTT---------ACAGCACCTGACTTCTAGTT chr4 + 94230402 52554428 52554427 52554665 52554428 52554427 52554665 238 CCAGCCTGGCCTGTCGGTTATTTCCATGGAGATCACCAGAGCGCAAATGATGAACCGGCAGGAGGAAGGGCTCT----TTTGCATCCTGGTGCCTGCT----GTGTCTAAATTCTGGCT-CTTAATGCACTCTCTTGCCGTAATTTATTTCTCCATTACATTTCTGACCCGGGCCCCAGCTTTGCAGCTATCACTGTCAGCCTTTTGCCCCTCTAATTATGCTAACAACAGCACCTGAATGCTAATT .:..:.....:.:.:...:........::.....x.:::..:.:::.....:...::...........:.....----.:x...x..:xxx...:x..----x..:.x:xx..x...:.-..x....:x:..:x..x..x....x.....x..::.....:..x......x..x:::.:x.xx:x:...x......:::.:....x.--....:.:..---------...........x.x...:.. 74M4D20M4D17M1D87M2I9M9I20M 153/227 67.4% 238/94230402 0.0% 20/227 8.8% 12669793 NA +3263 chr4 + 190214555 65251840 65251839 65251918 79 GTGGCGCATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATGGCTTGAATCTGGCAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--......:............:........x.xx.x...xx:......:.::.x..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -10781361 -83449041 +5916 chr4 + 190214555 65259337 65259336 65259610 274 CTCCCTGACGTTTCAAGAGCCAAATCGCTTTTTATT--TTAATTGTAATTTAAATCTACTTACAAGTGTACAGAATGAATAATCAAAAGAACTCAATGGATTAGGATAATGTTTTTTGTTCCAGAAGCCT-CTCTTATTAACATTTTGCCTTTTGTATTAACATCTGATTTTGCATTGCCATCTGAGTTCCCATTTTTATGTAAATAATGGCTGACCTCTGGCACTCAATGTGTTATTAAAAATGCACTCTTGGAAGCA--CATGTATTTACTAATTAG chr4 + 94230402 52556537 52556536 52556789 52556537 52556536 52556789 253 CTCCCTTAGGCTTTAAGCA-------GCATTTTACTGCTGTGTTGCAATTCAGGTTTGCTTACAGAGGTGCAAAATGAGTGACCAGCAGCTTCCACCAAGAGAGGGCAAAGCCTTTT--TCTGGCTGTGTGCTCTGGCTCCTGCTTCCTCCCTGATATTGGTGTCAGATTGCTC--------------TCCCATTTTCATGTAGATGAGATCTGACCTGTGGCAGGGGATGTGTTATTAAAAATGCACGCTTGGAAACACGCATGCA---GCTAATTAG ......x.x.:..:...x:-------..x.....:.--.xx:...:....:.::.:.:......::x..:..:.....:.:.:..:x..xx::..x::::xx...::..x.::....--..::.xx.:x.-....x::.xx:::..:x:.::.x:....::::..x....x:x.--------------.........:.....:..:.x:x.......x.....xxx:....................x.......:..--....:.---:........ 19M7D10M2I79M2D11M1I43M14D71M2I6M3D9M 161/248 64.9% 253/94230402 0.0% 31/248 12.5% 12702800 NA +3073 chr4 + 190214555 65278542 65278541 65278611 70 AGTTCTTTTCTTTTTTTTTTTCTCTCCTTCTCCTCCTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTT chr4 + 94230402 14674438 14674437 14674507 14674438 14674437 14674507 70 AGCACTTTTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCCCCCCATTCCCTCAATTTTTCTTGTATTTT ..:x.....:......:.........:::...::...x.:..::.x.:::..:xx.....:..x.x.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 50604104 NA +3261 chr4 + 190214555 65278561 65278560 65278612 52 TTCTCTCCTTCTCCTCCTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 68431716 68431715 68431767 68431716 68431715 68431767 52 TTCATGCTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTTT ...x:x.:...........:.:x..x....:..:.................. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -3153155 -91077247 +3285 chr4 + 190214555 65278569 65278568 65278645 77 TTCTCCTCCTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTGACAAGAAC-------TCACTTTGTTGCT chr4 + 94230402 56907959 56907958 56908039 56907959 56907958 56908039 81 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTC---TTTTTGGCAAGGGCTTTTCTTTCACCTTATTACT .:.x..:::.:.....:.x......:::.:.:...............---......:....::.-------....:..:..:.. 47M3D14M7I13M 55/74 74.3% 81/94230402 0.0% 10/74 13.5% 8370610 NA +3063 chr4 + 190214555 65283158 65283157 65283220 63 TTATCTCTCTCTCTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 48270726 48270725 48270788 48270726 48270725 48270788 63 TTATCTCTTTCCTGTTATAAATATGTATACATGTACATATTTGTGTGCATGCATATATGCTTG ........:..::xx....x....:....:..:..:....x......::..::.:.:..:x.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 17012432 NA +3074 chr4 + 190214555 65283165 65283164 65283219 55 TCTCTCTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 6857599 6857598 6857653 6857599 6857598 6857653 55 TTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGT .::...x:x.x.......::..:...::....x..........x........... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 58425566 NA +3022 chr4 + 190214555 65283172 65283171 65283236 65 GTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATGTATATACAAA chr4 + 94230402 27325495 27325494 27325559 27325495 27325494 27325559 65 GTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAA ....:xx.:....:.:x.:x.:x..x..:...........:..........::.::.....::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 37957677 NA +3036 chr4 + 190214555 65283174 65283173 65283225 52 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 6857610 6857609 6857661 6857610 6857609 6857661 52 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAAT .......::..:...::....x..:.......x...........x..x.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 58425564 NA +3216 chr4 + 190214555 65283177 65283176 65283238 62 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATGTATATACAAACA chr4 + 94230402 27325502 27325501 27325563 27325502 27325501 27325563 62 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .:....:.:x.:x.:x..x..............:.........:::..::.....:x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 37957675 NA +14132 chr4 + 190214555 65319552 65319551 65321432 1881 ACAATCAGATGTAACTGT-ATTCAAAGGGTTTTTATTTTC-TGAAAAAATATA--AAATTTCATATCTTACACTACAAAAAGCATGTACACAAACCAAATGCACATAAAGATTCAAATGAG--------------AAAAAATACAGAAATCCTA-ATCCTTCTTTGAATT--AACTGTGAGACAGGAACTTGAGATAGCCTGATGTATATC--ATAGAATAAGATATGCTATATAGCTGCTTCTGACATGTCTGAAACTAAGAGATTTTGGTAAAAATACTAACAAATGA-CTGAGTCTAAGT---ATTCTCAGGCTCTTATAAATGTAACTACTCACTTTTAAATAATTGACTGTAAAACTACAGCAGCCTAAAGAGTCATAGATATGTTGACCACTGAAACTTCTACTGTGAATACAGTTCCCAGCCTGAATAAACA----TGACATTTTACCACCTTCAATTTTCT---------CCATTAACGTTTAGAAGAAAC-----AAACAACATTTGATTCTGATTATTATAAACAGACTTTTTTT--------------CTTTTAAAAGAATTGGTATCTTCTTC----------TAAGCAATGATTATGTGGTCATTCTGAACAAGAACATTCAATCATTTATGTGTGAAAAGATTTCTTCATAAATGAATAAGAAA------TGAAAAGAAAGTTCCTATTTC-----TATTTTGATACATTACTATATAATTAACAGCACAA-----TAGAGAAAATTATTCAATGTA--AACAGCTGTGCTACAGAGTTGAAAAAATGATGACTTATTTTACTTATTAATGTCAAATAA---AGCTAGCATTTTGATTCCATTTATTCTTCATCATCATCATCATCATCATCATCAGGATCATCATCATATTGTACCTACTTTTTGCTTAATTTGAAGTTAAACATCTGGCAGGACATTAGCAAAGACAGTTTACTATCACACTTCTTTTTTTTCTTATTTTTAGGAAAAACAAAATGAGAAAGGGA---CCTTATTCTACTA-TGTAATATAATACATCTAATAA---ATTTCTAACACCTGACTCAAATAGTGTTTGCCATCCAATGCACTTTTATA-GCCAAAAATGTCTTCAGAAGGTAAATATCTGTGCTTGTGCTTC-TGAGAACCCACTTTACATGGCATAAATA------------------------------------------------------------------------------ATGGTGTTAAAAATATTTTACTTT-CACATACAGAT-TAAGTAGAAGACATGAAAACACAT--AAGTGCTCAAATGAT------------ATTAACTTTCCAT--------------------TTTAAACTTGAAACATGAAACTGTGTCTTCACTTTT---TTACACTGGTCAAAAC-TCTTTT----------------ACAAA--CTGAATTAAGGATATTCTGTGTTGTTTAGGCAACTCT--------------------------------------GAAACCAATAATGCTGGCCACACTTA-------AGTTTAGAT---------------------------------AAAATATT------------------------------------------GGAATATAATTTTTACAGTAATCT--TACAACCTTAGAATACTGACTTGGTAATTGAAACACAAGAAATAAAAGATCATGCACATTACAATTTT------AAAACATAGGAAAATCAAAATCTTTACATCTTTACATAGAAATAGTACATTATGAAA----AGAGCAACTGGTTATATTAATAGTATATATGAGCAAATGACAAGATTAGAAAC--AAATT-------------ATGATAGGTCAAAGTAGTAATTGAGTGA--CTTC---AAGTATCAGTCTGTTGAAAATTACTCCCTGTAC-CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCC-CCTTAAGATATTGCTACTGGCAATTACAATAAGATTATGTATTATTTGCCAAATCTGTTGTATATACTAAAATTGTCATGTCTGTGCTTT----------ATTTTTGGTAGTCTGGTGGGTGACAAAATGAATCAACAGAATAAGAAATTACACAATCAAGATTTGTTAAACTTTGCCTTGGATTATGGCCTCACTACATTTTACTA---GAGTTGGCTCCTCTCCTTGTTCCATTTCTCACACTTGCAGATGAGATTGGCATTTTC chr4 + 94230402 52559211 52559210 52561338 52559211 52559210 52561338 2128 ACAACTGGATGTAGCCATTATTCAAAGattttttatttttatgaaaaaatatataaaatttCATATCTTACACTACTAAAAACATGTACACAAACAAAATGCACAGAGAGCATCCAAGGAGCGGAGCAAGGAGGGGATAAATACAGCAACACTACGGTCTCCTGTGAGTTGAAACGGTGATGCAAAGAGCTGAGACAAA-TGCTGCAGCACCAATAGCACTGGATATACAA-------ACTCCTGACCTACATGGC-CTAAGGAATT--GCAAGAAACATTAATAAAGGATCAGAAACTAAGTGCTACTCTTAGACTGCTATTGATGTATC-ACACACGCTTTAATGACTAATTTCAAGACTACAGCAGTCCAAGGAGTCACA-ATTTCTTGACCACGGGGAACTCTACATT---TTTATATTCAATACTGAATAGACAACTTTTTTTTTTTTTAATCTTTGCTTTTTGTTCTTCTTGCTGTTAATATGTAAAAGGAATTTAAAAAACAACA----------------AAAAAAAGAATTTCTTTTAAAAAATAATCTTCCTTTCTAAGGTTAGGTAATTTAGCCAAATGATAAATAAACAATGAATTGGAGGTCAGTCTAAACAAG-------------CCATACTTGGGGAGGTTTCCTTCTCCCGAGATGAAAAACTGTTTTGAAAAGAGCCTCTTCACCTCGCAAGCCCTTTGAAATACCTCCTCACAATTAGCAGCAAAACGTACTGGAAAAAAGTATTCAATGTACCAACAGCAGCGCTGGTGAGTTGAAAAAGCAA--ACTGCTTTGACTTAACGTAGGCAAGAAATCCACCTACAGCTCCAATTTTACTGATTA------------------------ATGAAAACCACTGCCTTGTCGTGGCTTCC---------------------AAGTCCAGCACACAACTGGCAAGGTCAGCTAACTACCGT--CTTTATCTCCCCCTGTGCTTACAAAGGGCATAGCCAGAAAAATATTACTGTGATCTCCTACTGCACACCAATATATACAATCATCCATTCACAATGTCTGATTT-------------CAGGCTATACATTTTCATTTGCCA----CTCCTTTTGACAGCAAGTTTTTCTACTTGTGCTTTGTGGTGCCCCGGCTCAGCAGGTGAAAGCAGCAGCAGCCTGGCCAAGCCCGCAGGCAGAAGGTTTCAAAGAGGTGCTACCAGATCCCCCCGAGCCCTTCGAAAACGCCATGGTAGAAAGGGAGCTTTACTTTACAAACCTAAATCTGCATAAGAGGCCCGAATAAATGTCCAATTGCCCCAGAGACTGAGTACTTGCAGTTCTCTCTTCACCGGTAGCTCTGTCGTCAGAATTTGTGTGTGAATGTTGAAGCTGTA-----ACTTTTGGACCATACCTGTTAAAATGTCTTTTTATTTTCAGTTCAGAGACAAAGCCTATAGTAAAGAGATC---TGTAGCATGAACAGCTCTTGAAATAAATATAAAAGATCATTTATTTATTTATTCAGGGAACTGAGAGTAGGTGCCCTATTTACAGATGCAGTCTGGTTTAAGAACAGTTCATTTTCCACGGGTCCCTCTGAAGAGCATTCTGAAGACTGCTCCAGTATCTGGCAGTTACTGCAGTGTCTCAGGAACACCATTCTCACCTCCATGTGGTGCACCCCAGCAGCACTGTGTATGCCTTTAAAACCCCACAAACAG-----------CGATGGGATTTTCTTGGAGAAGCACACGAAAAAGGACAAACCCAAATCCTTACGCAGAGCCAGCAGTTAATAAAATACCAAAGAAATTGGGCAGA------------AAGGCCAAGTGCTGAAATTTGCTACTAAAATCTCTCTTGGTGCAGCTGATGGATGCATGTGGAAACCAAACGATACTTCCCAAAGAAACGAGTTGTTGTTTTTGTCTTCCTACGGGTTATTTTACAAAGTGCTACAGGCAGAGAGGCACAAATAATCCCAAGACAGCTCTGCAGACAGCCCTAATAATGTTATTTATTATTTGACAAATCTCTGCTATGTGCCGAAATTGTTATGTCT-TGATTTCCTCTCCCCCACCTTTTGTGGCCTGGTGGCTGACAAAATGAAGCAACAGGATGAGAAATCACACAATCGAGGTTTGTCAGACCTTCCCCTT-----CTGCCCGGCTGTGTCTCACTGCGCAACTCAGCTC-------TGTCTCATTTCTCGTGCTGCCAGGCGAGCTCGACAGTCCC ....:::......:.::.-........:x..........:-............--.....................x....:.............x.........x.:..xx..x..x...--------------:.x........x..:x...-:x:..:..x...:..--...x....x:..:::.x:.....:.:x-..x..:.xxx.--....x.:x:.....:.x.-------:..:.....x.::x..:x-.....::...--.xx.:...:.:...:...x..-.x..:x......---.:...:..:..x:...x:.....x.-..x...x:..x...:.:.:.:.x:..:..........:.:..:......:.-..x.x........x.::.x:.....xx.---.x:.xx.:.x.xx.......:...----.xx:x....x:x.:...::x....:x---------.::....::.x..:...:..:-----........----------------.x...x...x...:...--------------.:...xx...:x.x....x:..xx:.----------...:......x.xx.x.....x...:......-------------::..::x..:::..:....:.:x.xxxx::..:.:...------........:xx.::::.::..-----:x:.....x.:.::x.:x:.:.....:.....x..-----.:..:....x...........--......x.:...:xx...........:::.--...xx...x.....x::xx.x...:x..---.x...xx::.:::...::.:.x...x------------------------..x.::.:..::::.x.:.:..:x..x.:---------------------.x:..::...x:xx.:.:....:.x...:.x....:.::--:.:.x.:.:::.:.:.x:...x:..:::..x.::x.....::x.---.:x.:x...x...-..:.xxx:....:..x:...x.---...:x:..:::....:.:-------------..xx.x..:..:...:..x-....----:x:...:x..x:.:..:.x.:.x.:.........:-..:x:x...:x:.:.xxx..::x..::.------------------------------------------------------------------------------.....:xx..:::x::........-..x.:x:.:..-.:x:..::..:.x:...x.x.::.--..x...:.x.:x..:------------:..xx..:.:..:--------------------...:x::x....xxx....:....:-----......---::.:..:x..:....:-......----------------.....--..:x.x...:..x..:---...x.:x.:::..:....--------------------------------------.:...::.x.:.:xxx...x:.:...-------...:.:.x.---------------------------------.:.::...------------------------------------------....:.:x...:.:..xx:x..x.--.:..x..:x:x.::....xx.xx.:xx..:....x.x.x...:.:-----------.:x.:x:.....------:..:..:.x.....xx:.x.xx:::.x...:....::...:x:..:.xx.x..:...----.:..x..:...x:.x.------------.x.:x...:..x::.:...x.xx..--....:-------------x....:.:.xx.x..:.x..:::.::..--....---...x.x.::x:.....xxxx.xx..:...:::x-:x.....x......x.x.:.xxxx..:..:.x..x::x-:.::....:.x:x..:.x.:..:::x:.....x:....x.........x.......x.xx...:.:.::.......:......-..x...----------.::...x..:.:.......x............x......:..:......:........:..:.....:.:..:..x..:.x-----:x...:x:..:::.:.:...:---:.x.::....-------...::........:::..xx...::...x.:.:..x.::. 18M1I21M1I12M2I66M14I19M1I15M2I27M1D11M2I18M7D18M1D10M2D21M1I12M3I25M1D51M1D28M3D24M4I26M9I21M5I8M16D17M14I26M10I32M13D38M6I21M5I35M5I21M2I30M2D28M3I26M24D29M21D39M2D44M3I13M1I22M3I18M13D19M1I4M4D35M1I28M78I24M1I11M1I24M2I15M12I13M20I25M5D6M3I16M1I6M16I5M2I16M3D18M38I26M7I9M33I8M42I24M2I45M11D12M6I57M4I16M12D25M2I5M13I28M2I4M3I33M1I38M1I83M1D6M10I81M5D21M3I10M7D40M 1091/1726 63.2% 2128/94230402 0.0% 557/1726 32.3% 12760341 NA +40151 chr4 + 190214555 65323316 65323315 65324254 939 TATATGTTGCTAAAATTGAAACACTATTAGAAATGCAA-GCAGAATGGT-AACACACA-----------------CATGTGCAAGCAAACACACACACAATT---CCATCTTAAATCAGTTCCTGGGTATATTGCAAATTATACAGTATATACACATTTATTACCTAATAATCTC-TAGAAGAGCAA-CTAAAAGTAAACTTTATAACACAAA---AAATAAATATACACCCTGTATTGTACTTTTTCTTGATCAAGCAACATGTTTACACACTAGTTTCTATAACTTAACGCTGTGTAACAGCATTTT--AAAATTACAAAAGAAGATATCTATTAAGAAATAATCTAATCATATTGCTCTTCAATACACTTTTGTAGACAATTAAGACTTGAAGTAAACTTCAGTAAACTGTAGCTTTTGTTAGCTCACAAATGGCTATAAAACATTTCCTTTCAAGTAGATCCCTGGAAGTTTTGAAAGG---GGTTGCCTTAATTCAGTCTATAAAAGTGCTATATAATTATATA--------------TTTCATGTACAAAATTTTGTAGAAGTAGTGGGAAGGATT-CTGTTGT------TGTAACTTAAGATGATGTCTAACTTCATGT----------------CCCTTTTAATGCAAGATATGTTTGCTTCATGAAAAATGAAGAC-TAAGGACTAAG-AACTGGATACTTCAGTAAAACCATGA-TTACAAATTCTGTGGCTGAGGCAAATGTTTTCTAAGGTTTAGAAATCACTG-TTTTCCCTTTTCCCCCTTTTTTTGTTAAAATAAATCTCAGTGCT-GTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTTACAATGGCACCATTCCGTTTACCAGCTGCACCTTCATTTCTTGAAGGCTGTTCATGATCTTCTTCTGGTGACCGACAAGAGTCACTCCAAGCCGTCTCAAATCCCTGCATGAAGAAAGCACACATTGGATGTATTGATT chr4 + 94230402 52562875 52562874 52563871 52562875 52562874 52563871 997 TATATGTTGCTCAAACC-AAACAGCAGCAAAAATACAAAGCATAGTGGTTAACACAAAAGGAAGACAAAATGAAGCAAAAGAGGGAAAAAGAACAAAACATTGAGAAAGCCCCAATCTTGTACCTGATGTGTAGCAAACTGTACAGTATATACA---TCATAACGTATTATCCTCACAGAAGAGCAAACTAAAAG--AACTTTGCAACACAGAGAGAAAAAAATATACACCCTGTATTGTATTTGCCATTGAGCAAGCAACATGTTTATACACTAGTCTCTATAACTTAACGCTGTGTAACAGCATTTTTTAAATTTACAAAACAAAATATCTATCCAGAAATAATCTAATCATATTGCTCTTCAATACACTTCTGTAGACAAGTAAGACTTGAAGTAAACTTCAGTAAACCGCAGCTTGTGTGAGCCCACAAATGGCTGCAAAACTTCTCTAGTCAAGTAAGTCCTTGGAAGTATTAACATGTGCTGCTGCTGTAATTCAGTATATAAAGGTGCtatatatatatatgcatatatatatatCTCCCATGTATAGAC-----AACATGTGGTGGGAAGGCTTGCTGTTGTCATCGCTGAAGCGCAAGAAATTGGGTAACCTCATGTACAGTAGATCCATTTCCATGTTCCATGCATGTTACATTTACTTCATG-AAAATGAGGACACAAATAGGAAGAAAATGAAAACTTCAGTCAAACACTGCTTTATAAATGCTGTGGCAGAAGCCAGCGTCCT-TCAGTTACAGAAACCACTGAATTTCCCTTTT--TTCTTCTTTAGTCAAAATAAATCTCAGAGCTAGTATACAAAGTGCAGGACCGACCACTCGAGGAAGTGACTTAAAAACCGAGTTACAATGGCACCATCCCATTCACCAACTGGACCTTCATCTCTTGAAGGCTGTTCATTATCTTCTTCTGGTGACCAACAAGTGTCACTCCCAGCCGCCTCAAATCCCTGTG-GGAGAAAGCAGATGTTGGTTCCAGGGATT ...........x...::-.....x:.x:.:....:...-...x.:....-......x.-----------------..x:x.x::.x...x:x...x.xx...---xx.x.::x....xxx.x.:x.:.:.:.x.....:.:.............---.:..x..x..x..x:...-:..........-.......--......::......:.---...x.....................:..x::x....x...............:........:...............................--...x........x..:........:x....................................:.........x...........................:.:.....x...x...:...........::.....x.:..:xx.......::...:.......x..:.x.x.---x.:...:x.........x......:..........xx.....:--------------.::......:.:.x-----x.x.x..:.........x..-.......------..x.:.x:....x:x..xx....:......----------------.x:x..:x.....x.x..::...:.......-.......:...-:..:x.xx...-..x..:.x........x....xx..x-...:....x.......x..:..x.::..::.-.x..x.x:.....:.....-x..........--::...:...x..:..............x...-..x............:.:.:x:....:..:....:...x.xx.x.:x:.................:..:..:....:...x........:.................x.................:.....x........x.....:............::-.:........x.::....x.x:.xx.... 17M1D20M1I10M1I8M17I27M3I49M3D18M1I11M1I7M2D16M3I93M2I172M3I43M14I14M5D20M1I7M6I30M16I31M1D11M1I11M1I26M1I31M1D19M1I11M2D31M1I161M1D29M 724/923 78.4% 997/94230402 0.0% 90/923 9.8% 12760441 NA +14162 chr4 + 190214555 65331738 65331737 65332133 396 CAATTATTCAAGTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGT------------AGCATTAACC----ATGCAGTTGTTAACA---ATACAG--GCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTT-----ACCTCATCCAGATTGGTTTTTGAACAATTTTTCTTGCCCCAGCAATTAT-------GTAAAAATTATCAGAAAAATTACTCACTCCAAGGTCACCTGAGCCACAGCGTCCATTGAACTGTATCCATTTTCCATGAAAATCTCTGTATACCGGCCCATCTTGATTGCCTCTAGCCATTCACCTACTGATCTGTAGGCCCCAGATCCTAGTGGGCTATGTTCTGCCAATAAATTAGATACTCTAAA chr4 + 94230402 52572459 52572458 52572868 52572459 52572458 52572868 410 CAATTATTCAA--ACTCAAGCATTAATTTCTGTGAGTAAAGAAGCCAAAGTACTGGCTGCCAGCGTAGTGACGGTAAGTTTTAGTCTCGTCTGCACTTGTTATCATCAATACAGATGCTAAAAGAGAAG--------CTGATGACTGCAA-------ACAAAGGCAAACAG-TTTCCTTTCTTCAGTCTCCTCCGTACATATTTTTGAAGTTTGTTTCCCTCCCCAGCTGCAATACAAGTGGTGAAAATGATCTGGAAA-CTACTCACTCTAGGGTCACCTGAGCCACAGAATCCATCGAACTGTATCCATTCTCCATGAAAATCTCGGTGTATCGACCCATTTTGATGGCTTCCAGCCACTCACCCACTGACCTGTAGGCACCGCTCCCCACTGGACTGTGTTCTACCAACAAATTTGATACTCTAAA ...........--.:x.x.:::...x..x:.xx:..:........x..::.......::.xx.:------------..:x...::.----x....x......x..---......--......::x..x.--------:...x::....x.-------:......:x...x.-.....:..-----::...x...:x.:xx:........xxx.x....::x.......x::x..-------..:.....x...x.:...-:.........:.:.................x:.....:..............:..............x..:..:..:.....:.....x..:..:.....:.....:.....:........x..:xx:..:.x...:..:......:....:.....x........... 11M2D51M12I10M4I15M3I6M2I13M8D13M7D14M1D8M5I49M7I18M1D169M 281/377 74.5% 410/94230402 0.0% 52/377 13.8% 12759279 NA +21123 chr4 + 190214555 65335901 65335900 65336756 856 TCTGGAAAATCACTCGGATCTGGCCTTGTACCTGCAGGATGCATTAACCAGCGTCTTCAGACTACTTGGGTTACGTATCAGCTTGTCCAACATGTTGACTATTTCATCAAACTTGGGCCTGCTATTTCGCTCTTTCTGCCAGCAATCCAGCATTAACTGATAGAGAGCAGCAGGACAATCCATGGGGCTTGGCAGACGATAGCCTTCCTCTACCGCTTTAATCACCTGTATAAAGCAAAACAGAA---------------------CCAGCACCCCAACACCACAAATTTAG-----------TATAGAA---TAGCTTTAAAAATGTCCCACTGTCCAACTTTTATCCTTTCTTATCCTTACTCTTGCA-----ATAACAACTAGCATTACTGTCTTTAAAATCCACGGCT------------------------ATTTCCATTTGCTGCAAAATACAACATAAAATAAATATACTATCATAATATAAAAAGATAGGCTTTCTTCACGTATTATAAATAAAATAAATGGTAATCATTTTTTCTTAAAATCTTGGTGAAGGGTGATTTGTAAAATTAATTGACATAAAATATACAGTTCATGTTTTATTTATCCTTGCACTCCAGAATCAA---ATAGAGATT----AAATTTTCT--------AGTGATTTTTCTG----AAAAGTTAATGTCTTTTT-AATGAAAAACTATGTGCACAGCCAC--ATTT---TTAAAGTAATAGAACTGTAATTTTACTTCAAAAGAGACTTTTCGATGGTAAATGATGGATAAGTCAAAGGCTAAATTAGCATAACTGTCTCATGTATCATTTAATAATGTCAAGGTCTGACTGTTTATTATCATCTGCTGATTTCTGTCAGGAATCTGGAATGACTGTCTAGTAGCACAAGAATTATAAATA-------------TCCTTGATTTTAAATGTAA chr4 + 94230402 52575842 52575841 52576736 52575842 52575841 52576736 895 TTTGAGAAATGGCTCTGGCCTGATTTTGTACCTGCTCGATGCATTAACCAACGTCTTCAAGCTGCTTGGGTTACGGATGAGCTTGTCCAACATGCTGACAATTTCATCAAACTTGGGCCTGCTGTTGCGGTCTTTCTGCCAGCAGTCAAGCATCAACTGGTAGAGAGCAGCAGGGCAGTCCATGGGACTTGGCAGGCGATAGCCTTCCTCCACGGCTTTAATCACCTATGGGAAGTAAAACACAAGGCTGATGGGTTGCTTTTTTTCCTCTTACCTTTTTCCCCAAATGCAGATTGGTTTAAATAGAGAACTCTGGGTCTAGCAATATGCTCACGCGCAAC--TGATCC-------CCCCAGCCTCTGCATACAGGAGACCAATAACGTAAACCCCATTATCTTTCACTGCTTCTATGGCACAGGTTGAATAATTGATTTTTAGTCACTGCAAAATGAGTCTAGAAATCCA-ATGCAACTAGAAGGTCAGA-------------TCTCATGTTGCA-----------------------CTTGTTCAAAGCTCAGCCGAGGTCTGTAGGTCACAC-------CAGAAAACTCCTAGAGACTGTT---------CTTGTCTGCCAGCAGCAGCCTATGGGGCTTTCTGGCATTGTCTTGGAGTACAGTGATTTTGTTTATTCAGATGTTGGCTTCTTTTTAAATGAAAAGGCATGTGCTCAACCACAGATTTGTATTACAGTAATAAAAGCCTGACTGTATTTCAAAAGAGACTTTG-AATGCTAATTGATGGATGGATTCGAGGCAGAGGCAGAACAACCATCTCATATATCATTCAATACTGTCTGGGTTTAGTCGTTTCTTACTGTGTCCACGTTTCTGCCAGGAATTTAAAATGTCAGCCTAAGAGTATGTAAATTAAAAACAGGGGAAGTTTGTTGCACTGATTTCAAATACAA .:..::....x:...x.::...:::..........xx.............:........::..:...........x..x...............:....x.......................:..x..x..............:..x.....:.....:..............:..:........:........:..............:..x.............:.:x:...:......x..---------------------..xx:xx..:xx:x..x.....x:..-----------..x....---.:.x.:..:x...:.x.:xx:.:x....--.x....-------:..:x:.:::....-----:x:..x.x..:.:.x.x:x:.x...xxx.:...x...------------------------....::.x.::.........:x:x.xx:....xx.-..:.x.::.x..x:.x.:.-------------..x.:.:..::.-----------------------:..x..x...x..::.:x:...x:x:.xx..x.x.:-------..x....:x:x:..xxxx....---------....:x:x....x.x..:---..:.:.x..----:x...x...--------.........x:.x----.:.x...:::x.......-........:x:......x..:....--....---...x.......:..x:x.:.:.x..:...............x-:...x...x........:::.:x:....x:.:x:..x.:...::......:.......:....x....x:...:.::::....x...:::.x.x.xx:......:.......:.::....x.x.:...:x..:.::x:.....x...:.-------------x.x:......:....::.. 245M21I26M11I7M3I28M2D6M7D14M5I37M24I35M1D19M13D12M23D36M7D22M9D18M3I9M4I9M8I13M4I18M1I25M2I4M3I42M1D149M13I19M 548/793 69.1% 895/94230402 0.0% 165/793 20.8% 12760059 NA +17179 chr4 + 190214555 65348045 65348044 65348487 443 CATACTCACATCTTGATTGGTCATCTCCCAGTAGGGTCTCTCTCCATAAGACACAACTTCCCACATTACTATTCCATAACTCCAGACATCACTGGCAGAAGTAAACTTTCGGAAAGCTATTGCTTCTGGGGCAGTCCATCTGATTGGAATTTTTCCTCCCTAAAATTGAAAAAGATTTAAAAAACTTCCTACATACTTCAAATGTGCCTAG--------------------GGACAGTGTTGCCT----CACTGAAAAG-----------ATCTAGACAGAGATGTAGCATTTTTAAGTGAATCTGTTTGACAGCGCGCAGTGTCTTTTCAAATC-TCTCAGCCCATAAGCAGTTGTAGA----CTACTAATTGGCTGTCTAGAAGGTTTCTAGTTTAAATTCTGTGTGACTACTGAAATACATACAGAAACCACATCTCAATTACAGTCCTCAGTATAGCAGCTCTAAGTAAGGGAAAGCAG chr4 + 94230402 52580748 52580747 52581220 52580748 52580747 52581220 473 CGTGCTTACATCTTGGTTTGTCATTTCCCAGTAAGGTCTCTCGCCATAGGACATCACTTCCCACATCACAATGCCGTAGCTCCACACATCGCTGGCCGACGTGAATTTGCGGAAGGCGATTGCTTCAGGTGCCGTCCATCGGATGGGGATCTTCCCTCCCTGCAATGAGAAGGCAGAAAAAAAAAAAAAAACAGACTGCAGAGGAGGGCAGATAGCATGCAAAAGAGGACAAAACAGCACTCCTTAGAGCACTGAGGGATGTTATTTTCTCTCTGGAAAGAGACATCGAATTTTAAAGTAAATCTGTTTGACAGCATGGGGCCCCTTTCCACATTATCTCAGCCCATAAGCATTTGTAGGCTGCCTACTAATTGGCTGTCCTGAAGGTTTGTTGTTTGAATGCTGTTTGAATGCTGGGACATGTATAGGATCAACATCTCAATTA----------TGTTGCACTGGTTGGTAGGGGAATACAG .:.:..:........:..x.....:........:........x.....:....:x...........:..x..x..:..:.....x.....:.....x..x..:..:..x.....:..x........x..x..x.......x...x..:..:..:.......:x...x::..::x.xxx......xxxxxx...x...x..:.x.x.xx:..--------------------::....:::.x.:.----......::::-----------x...:..x.....::.x.x.....x....:...............::.x:.:x:....:..x..:-................x......:----................:x........x.x....:...x....x...x.:...::.:.::..:..:.x.x............----------.:.x...x:xx.x:...:.....x:... 211M20I14M4I10M11I65M1I24M4I81M10D28M 314/433 72.5% 473/94230402 0.0% 50/433 11.5% 12767297 NA +3420 chr4 + 190214555 65348685 65348684 65348808 124 TATATATATATATAAAATATATATGTGTGTGTATATATATGTGTGTG---TATATATATGTGTGTGCATATATATATGTGTATATATATGTG----------TGTGCATGT----GTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812920 89812919 89813060 89812920 89812919 89813060 141 TGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:..:.:.x::..:..::..xxx.xx..x.:...:.xx:...x....---....x...x:.:....:....x..x...:x.xx...:.....----------..:.:....----..................:.x..x.. 47M3I42M10I9M4I26M 86/124 69.4% 141/94230402 0.0% 17/124 13.7% -24464235 -69766167 +3042 chr4 + 190214555 65348694 65348693 65348773 80 ATATAAAATATATATGTGTGTGTATATATATGTGTGTGTATATATATGTGTGTGCATATATATATGTGTATATATATGTG chr4 + 94230402 86633916 86633915 86633991 86633916 86633915 86633991 76 ACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGT----ATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:.x.:...:x:::..:...:...x:.......x...----...:...:.....:.....:..x...:.::..x.:.:.. 37M4D39M 52/76 68.4% 76/94230402 0.0% 4/76 5.3% -21285222 -72945180 +3356 chr4 + 190214555 65348700 65348699 65348806 107 AATATATATGTGTGTGTAT-----ATATATGTGTGTGTATATATATGTGTGTGCATATATATATGTGTATAT----ATATGTGTGTGCATGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 89812945 89812944 89813060 89812945 89812944 89813060 116 AGTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:.x.......xx....x.-----.....x:.:x:.:.:.:.....x.:x:...x.xx...:.....:.x.:----..::..:...x.x.............:.....:.x..x.. 19M5I48M4I40M 74/107 69.2% 116/94230402 0.0% 9/107 8.4% -24464245 -69766157 +3170 chr4 + 190214555 65348722 65348721 65348772 51 TATGTGTGTGTATATATATGTGTGTGCATATATATATGTGTATATATATGT chr4 + 94230402 65759986 65759985 65760036 65759986 65759985 65760036 51 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ..x:.x....x:...:..............:..:.x........:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -411264 -93819138 +3018 chr4 + 190214555 65348737 65348736 65348802 66 ATATGTGTGTGCATATATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..::..:..xx::....:.:x..x::x..x...........::.:.........::...:...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 38023246 NA +3129 chr4 + 190214555 65348739 65348738 65348804 66 ATGTGTGTGCATATATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:..:..xx.:....:.:x..x.:x..x..:......::...:.........:::..:...... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 38023248 NA +3213 chr4 + 190214555 65348741 65348740 65348802 62 GTGTGTGCATATATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATAT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:....:..x:.......x.:....:...:.....:..:.:::.x...:..:..x.:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -21285188 -72945214 +3102 chr4 + 190214555 65348781 65348780 65348833 53 GTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 23522769 23522768 23522821 23522769 23522768 23522821 53 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTT ..::..........................x:x.x..::.x.....:.x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 41826012 NA +3203 chr4 + 190214555 65348782 65348781 65348832 51 TGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251053 33251003 33251002 33251053 51 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATT ...................:.:........x.xx....x...x.....x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 32097779 NA +3003 chr4 + 190214555 65348783 65348782 65348833 51 GTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 23522769 23522768 23522819 23522769 23522768 23522819 51 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTT ..::........:.................x:x....::.x.....:.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 41826014 NA +3043 chr4 + 190214555 65348795 65348794 65348837 43 ATATATATATATATATATATATTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 24792626 24792625 24792668 24792626 24792625 24792668 43 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAA ...................x:........x.........x.:. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 40556169 NA +14612 chr4 + 190214555 65351373 65351372 65351610 238 CTCTGTTAGATCTTACCCTTGTGGTGTAGGCTGCCTCGGGATCATCTTCCAGTACCCGGGAAAGTCCAAAGTCAGACACTTTGCACACAAGGTTACTGTTGATTAAGATGTTTCTGGCAGCAAGATCTCTATGCACATAGCCCATGTCAGAAAGGTACTTCATTCCTGCAGAGATACCTCTCAGCATGCCAACAAGCTGAATCACAGTGAACTGCCCATCGTTTTTCTGTAAAGACAA chr4 + 94230402 52582861 52582860 52583098 52582861 52582860 52583098 238 ctataatATAACTCACCCTGGTTGTGTACGCTGCTTCAGGATCATCTTCTAGGACTCTGGAGAGGCCAAAGTCAGACACCTTGCAGACTAAGTTGCTGTTGATGAGGATATTCCTGGCAGCGAGGTCTCTGTGTACGTAACCCATGTCAGACAGGTACTTCATCCCTGATGCGATGCCTCGCAGCATCCCGACCAGCTGAATGACCGTGAACTGCCCATCGTTCTTCTGCAAAGGGAA ..x.:x..x.x..:.....x..x.....x.....:..:...........:..x..:.x...:..x..............:.....x..x.:...:........x.:...:..:........:..:.....:..:..:..:...........x...........:....xx.x...:....x......x..:..x........x..x.................:.....:....:x.. 238M 190/238 79.8% 238/94230402 0.0% 0/238 0.0% 12768512 NA +10824 chr4 + 190214555 65356667 65356666 65357016 350 AAAAGCAATTAAAATGAATGTTTGCAAACAAGTA--TGATCTTCTTTTGTTGACAAGAATAAGA---CACTTCAGGACCCATTCGATTATTCTTCATGCGTGAGTCATTTTAATGCTAATTACATTTAGTTTGGCTTATGTTTTGTCTCAGCAAAACATAGCCTGCTAGCCTGCAAAAATGACATAGCAATAATTAACATGGCTTACTCTAACCCTTGTAAATTCAATAAAACTGTA--------------------------TAAACCATATTCCATTATCCAGCTTGAAGTACAGACAAAGACTAGATCTGCCAATAATTTTGAAAGCATGTTATCAAAAATCCATATAAAAATAACTCATAAA-------GCATGTCAAAACATG chr4 + 94230402 52584892 52584891 52585275 52584892 52584891 52585275 384 AAAAAGGATCAAAACAAAAGTTCTTAACAAAAGACCTGGCCTCCTATTGTTGACAGGAATAATAATGTTTTTCGAAATCCATTTGATTAATTTTCATGCCCGAGTCATTTTAATGGTAATTATATATA---TAGTTTTTGCTCAGTTTTTATATCTAATTTCTCGCTAGCTTGCCACAGTGGCATAGCAATAATTAATGTGGTGTGCTCCAGCCCTTGTAAATTCAATGAAATCTTATAAGAACATGtaaattattttttatttaaatCAATTTGCATTAGCTAGCATGAAGCACAGACAAA-AGAGGAGCTGTCAATTATTTGTAAAGTGCATTATAAGTGTCTTTTGTTGAAACGATCAACGAGAGCTGCCACATGTCATAACATG ....:x:..:....::..x...:x:..xx..:x.--..::..:..x.........:......x.---:x:...:::.:.....:.....x.:.......x:..............x......:..x..---.:.:..x..:.:x..:.:x::.xxxx..xx.::......:...x.x.:..:...............::...:x.:...:.:................:...::x..--------------------------....:..xx..x.....x.:...x.....:.........-.xx:..x...:....x....xx....::::....x.:x:x:::x.:.x:...::.::x.::.:-------:.......x...... 34M2I28M3I61M3D106M26I39M1D63M7I15M 234/346 67.6% 384/94230402 0.0% 42/346 12.1% 12771775 NA +8377 chr4 + 190214555 65362018 65362017 65362409 392 AAAGTGTCT---TGCATTTCAAATGAGTCAATTAAGCCAAGAACTGTGGGCTTTTTTTATGTCATTCGTCATGAAAGTTCTTTAGAATATATGTATCTATTTATGATG------------GTTGCTGTTTAACAATAAATCACAGAAGGAATTTGAATGGGGGCTCAAGCTTCTGGCATGTGATAGT---------GAAAAGATGAAGGCTCACGATGACACCACCCATAGGAGGGCTACTTCAGACTCCCTACCTCAACTTCAATAAGAAAAGTCACAAGATTTAGTTGCACTTATGTCTCATTATCTGTGTGCTGCTGGTTGAGAATAATTGCTGAATAAATTAGCATCAGATCAGAGAGCATGAAATTAAGGACACAAATAAAGTGAGTTGCAA-CATGGTAAATTAAAAACAA chr4 + 94230402 52585981 52585980 52586375 52585981 52585980 52586375 395 AAGGTGTTTCTCTGCATCACTGATGAGTGATTTAAGGTAAAACCCGGG----TTCTTTAAGCCACCTGTCATACAATCTCCGCAGAGAGCACGCTGCCATTC-TGATGTGCCCAGTCTGAGTTGCTGCAAAGCAA-------CTGCAGGA--------TGGGGCCCTTATCTCTGACATGTAAAGGCAGCACTGCAGCAAGACTGGCATCTCGTCACCTCACTGCCCCGAGG-GACCTCCTGCAGGATCCCGCCTCGGGTTTCCATCTGAGAAAATAAAAGATTTC-TTGCACTTACGTTTCATTATCTGACGGCCGCAGGTTGACACTAATTGTGAAATAAATTAGTCCCATATCCAAGAGCGTGGAAATAAGGACACAAACAGAATAACTTCTAACCAAAGTAAATTAAAAGTAA ..:....:.---.....:x.x:......x.x.....x:..:.x.:.x.----..:....x.:..:::.....:x..x:..:x:...:x::.:.:xx.:...:-.....------------.......:xx.:...-------.x.x....--------x.....:.xx:::....:.....:.x:.:---------.x..::x..:x:x...::x.:xx...::...xx...-.:x..x..x...:x....xx.::x:::...x..xx..:..:x:.x.......x-.........:..:..........xxx..:..x......x.x......:x:..........:x:..x...x:.....:..:..x............:.:.:.:.x..x:..-..x:...........::.. 9M3I36M4D50M1D5M12I15M7D8M8D29M9I36M1D53M1D110M1I19M 242/370 65.4% 395/94230402 0.0% 47/370 12.7% 12776037 NA +12498 chr4 + 190214555 65365011 65365010 65365225 215 ACTTACTTTTGGTCACCACACCTTCTAAATGGATGATGTTAGGATGATCAAACTGTCCCATGATACTTGCTTCACCTAGGAAATCTCTGCGTTGCTTTTCAGTATAGCCTACTTTAAGGGTTTTGATAGCCACAGGTAATTCTCTTTTTCCTGGTAGTTTCAAACGTCCACTACAAACTTCACCAAATTCACCTTGTGATAAAGATGAAAAAAAT chr4 + 94230402 52589306 52589305 52589520 52589306 52589305 52589520 215 ACCTACTTTTTGTGACGACACCTTCCAGGTGGATGATGTTGGGGTGGTCGAACTGCCCCATGATGCTCGCTTCTCCCAGGAAATCTCGCCTTTGCTTCTCTGTGTAGCCCACCTTCAGGGTTTTGATAGCCACTGGAAACTCGCGTTTTCCCTGCAGTTTCAGCCGTCCACTGCAGACTTCTCCAAATTCACCTTCAGAGAAAATCATAAAGGAT ..:.......x..x..x........:.::...........:..:..:..:.....:........:..:.....x..:..........xx.x......:..x..:.....:..:..x.................x..x..:..x.x......:x.:.......:x........:..:.....x.............xx..x...:x::x...::.. 215M 167/215 77.7% 215/94230402 0.0% 0/215 0.0% 12775705 NA +11145 chr4 + 190214555 65365916 65365915 65366072 157 AAACACATTGTCGTACCTGCTCCAATAACTCTCTCAATGGTGATACATGATGCTTCTATCTCCTTAGCAAATTCGTGGACAGCTTGATTGGGATCCTCATAGGTATGTGGATCAATGTAAGTTCTTACTCCTGGCAGTTTAACTGTAAATATAAATT chr4 + 94230402 52590608 52590607 52590764 52590608 52590607 52590764 157 AAACAAATTTCCATACCAGCTCCGATAACTCTCTCGATGGTTATGCACGAAGCTTCTATTTCCTTGGCAAACTCGTGGACAGCTTGATTAGGGTCCTCATAGGTGTGGGGATCAATGTAGGTTCTTACACCAGGCAGTTTAACTGCAAACACAAATT .....x...x:.:....x.....:...........:.....x..:..:..x........:.....:.....:.................:..:...........:..x...........:........x..x.............:...:.:..... 157M 133/157 84.7% 157/94230402 0.0% 0/157 0.0% 12775308 NA +6842 chr4 + 190214555 65367348 65367347 65367439 92 TTTGCTTACTGTGCCCATTATGAAAATGCATCTTTTCCTCTTCTGGATCTTGTTTTGCTTTGCTGTAGCCACACCGCCTGGAACAAAGTAAG chr4 + 94230402 52592484 52592483 52592575 52592484 52592483 52592575 92 TTTACTCACTGTGGCCATTATGAAAATGCATCTTTTCTTCTTCTGGGTCTTGTTTAGCCTTGCTGTAGCCACAGCGCCTGGGAAAAAACAAG ...:..:......x.......................:........:........x..:..............x.......:.x...::... 92M 80/92 87.0% 92/94230402 0.0% 0/92 0.0% 12774864 NA +11037 chr4 + 190214555 65376922 65376921 65377166 245 AGAAAGAAAAGGA-ATGCCGACGGTA-----ATACATATAGGTGG-ACATCACATAGGAGTGAAAGTGGGAGGGAACACTAACCATATTAGGCTTGGATGGGCAACAGCGCACAGGGAAGAAGCCCTCCCACAGCCACATTCGCAGCAACTGAAAAGCAAACAAGAGAGCCCAAGATAAGGAAGAGATCCCACTCCCTCAAATATAGCATAAAGACACTATGAATTTACTCAGGTGTCTGCTTTCCTTTTCA chr4 + 94230402 52599403 52599402 52599652 52599403 52599402 52599652 250 AGAAAGGAAGGGAGAGGCAGACTGTGCACAGAAACATGGAGGTGGGACACAAAATAGGAGCCAGCGCAGGAAGGAACACTGACCATATTAGGCTCGGATAGGCAACAGCACGCAGAGAAGAAGCCCACCCACAGCCATGATCGCAGCAACTGAAAAGCAAACAAAAAGGCCCAGGATAAGGAATA-ATCCCACTGCCCTGGCAAT-GCCCAAACACATTAGCAACATTCCTATATGCCCTTTTCCCCTTCTA ......:..:...-.x..x...x..:-----.x....:x......-...:x.x.......:x.:x.::...:........:.............:....:.........:.:...:..........x..........::x........................:.::.....:.........x.-........x..::::xx..-..x:...x...:..xx..:x.x.::.x:..:.:x:..:..:..::. 13M1I12M5I14M1I139M1D19M1D46M 181/243 74.5% 250/94230402 0.0% 9/243 3.7% 12777519 NA +12610 chr4 + 190214555 65404257 65404256 65404521 265 TCTGCTGATATATTGCTT--GCCTGATTTGTTTTGGGATGTGCTCAACAGCCAAATGGTCAGATCAAGGTGAGGAAGAGATCAGCTGCAGAACTTCAGAATCACAGCTTCCTCTCTTACCTTCCACTGAGGAGGACGCCGATAACCACTGCCAACAAAATGACTCCCACTGTCACAGACACAGCAATTACAGGAATCTGGCTTTGATCGCTGGATGCTGCAACTGCTGATAGGAGATACAGAAAATGGAGCTTGTGGTTAAAGTGAT chr4 + 94230402 52609119 52609118 52609368 52609119 52609118 52609368 250 TCTGTTCACATGCTGCTCTCGCCTAAATTGT----------GCTAATCAGC----TGGTCAGATAAAAGTTATTACAAAA---GTTGGAGAAGTGTAAATACACAGCTTCTTCTCTTACCTTCCACTGAGAAGGAAACCGATAACAACAGCCAGCAGAATAACTCCCACTGTTACAGACACAACAATTATAGGAATCTGGCTCTGGTCACTGGATGCAGCTACTGCTGAGACGAAAAACAGAAAATGGAGATTAAGGTTAAAATTAT ....:.x.:..::....:--....:.x....----------...x.x....----.........x..:..x.xx.x:.:.---.:..x....x.x:.:.xx.........:...................:....x:........x..x....:..:...:...........:.........:......:............:..:..:........x..x........x.x..:.x.............x..:x.......:.x.. 18M2I11M10D10M4D25M3D184M 196/248 79.0% 250/94230402 0.0% 19/248 7.7% 12795138 NA +3923 chr4 + 190214555 65412088 65412087 65412170 83 CGTGGTGGTGCATGCCTGTGATCCCAGCTACTTGAGAGGCTGAGTCAGGAGAATCGCTTGAACTCAGGAGGTGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--...::.:............:........:.xx.x...x.:.......:...:..x.xx:..:...:. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -10621109 -83609293 +18151 chr4 + 190214555 65414012 65414011 65414446 435 AAAGTCTTTAAAAGCAAGTT-TAAACATTTTTAAAGTATCTCCTGAAGT--ACCATCTCCCAGAAGACTGAA----------------TGCAATGAGGAG-CACGGACCAACGTGTTAA-CCTGCCGACCTACCATAATAGCATGACAGATGCTTCCTACCTGAAGGGGTCATGCCTGGGAGAGAGAGAGGGAGAGTGAGACTGACAGAGTGCCCAGGGAGGGTATTGATCCACTGACTCTTTTCTGGTAACCATTACTGAGACATGAGCTGACAGTAATTAAAATGACTTACACACTGGGGTGGTTTCAAACTCAAATCTTCGACTGAAGACACCATAGCCTGCTGCTGTACGTGCTCGAATTTGGAAGACATAAACTGAAGCTGGTTTCAAGCCCTCTGCAGTAATAGTTGTCTCTTTAGATTTGATAATCGTGTAGCTGGTCTCTTGGTCCTT chr4 + 94230402 52613029 52613028 52613475 52613029 52613028 52613475 447 AGGGCTTTTCTAAGCCAGTTCTAAGCTTTTCTAAGGCATTTCTGGAACCTAACAATCTCCTGGT-GCCTCAACTCCTGCCCCAACATGTGAAATGAGGAGGCAAGGACAGATGTGTTAAACCACCCAATGTACAGTCATGGTGTGCCTGAGGCATAATAAGTCAAGGGATGAGACC----AGAAAGGAGAAGAGCACAAGACCAGCAGAACTCTCTATAAAGGTAT----CAACTGACTCCTTGCTGGTAGCCATTTCAGGGTCATGAACTGACAGTAATTAAAAGGACTTACACACTGGGCTGGTTTCAAACTCAAATCTTCGACTGAAGCCACCGTAGCCAGCAGCTGTCCGGGCTCGGATCTGGAAGACGTACGCTGAGCCTGGTTTCAAGCCATCTGCCGTAATTGCGGTCTCTTTGGATTTGATGATGGTGTAGCTTGTCTCCTGGTCCTT .::.::...xx....x....-...:.x...:...:.:..:..:x...x:--..x......::.x-.x..x..----------------..x.........-..x....x:.:.......-..xx..:.:x...x:.x..:.::..x.x..x..x.xx..xx.x.....:.x.x:..----...:..:::::...x:::....:::....::x.:.x:x:.:.....----.x........:..x......:.....x.x.:.x.....:................x...............x.............................x....:.....x..x.....x..x.....:..:........:..x:....:x.............x.....x.....x.:x........:........:..x........x.....:........ 20M1I28M2I13M1D7M16I12M1I18M1I56M4D46M4D226M 318/426 74.6% 447/94230402 0.0% 30/426 7.0% 12800983 NA +14078 chr4 + 190214555 65420258 65420257 65420607 350 AGCAGCAGAACATGAATAGAGAGCTCCCTGTACACTTCTAGCCTCCATAATTATG-ACTGCAGAATCAAT-TGTCATTGATTTACACATAAAATTGCAACATACTCTTCTGCAAGTTGGATAATTGTAGTTGCTAAAATGAAAAAAAAAAGAAAGTGAGGACATTTTTTATTCT---------GTTAGTCTTACCTTTTCAAAATACTTGATTTCATACTCTAGGATGATTCCATTGGGACGATCTGGTTCTTGCCAAGACAAAGAGATGCTGTTTTTTGCAATTTTCCCTTTTTTCACATTGGTGACTGGAGATGGAGCTGCAAAATAGTTTAAATAAGGAGCAG-------TATGATTAATAAGGC chr4 + 94230402 52617059 52617058 52617422 52617059 52617058 52617422 364 AGAAGCGGCACACTAATGGAAAACAACACCCTCATTTCAAGTCTTCCTAATCATTTACTGCAAAATCAATGTGACATTGATTTATGCATAAAACTGCTCCATTCCTTTCCATGACTCAGATAATTATAACC----AGAAGAAGAGGACAGGAAAGAGAAGGTACTTGGGATGCTCAGCAATCAGTCCATCACACCTTTTCAAAATATTTGATTTCGTATTCCAGGATGATGCCGTTGGGTCGATCTGGCTCCTGCCAGGAAAGGGAGATGCTATTTTTAGTTATCTTCCCTTTTTTCACACTACTGACTGGAGAAGGTGCTGCAAGACAGGAGAAAAACAGAACAGACAAAACCATGGTTAGTAAGAC ..x...:.x...:x...:..:.:.xx.x:x:x..:...x..:..:.x....:..x-......:.......-..x..........::.......:...xx...x.::...::::.x.::.......:..:::----.:.x...:.::.x.:.....x..:.::.:..xxx..x..---------..:x:..x:..............:........:..:..:........x..:.....x........:..:.....:..x.::........:.....x.:x..:...............:.:x..........x..x.......:.:..xxx...x.x:..:...-------:...:...:....:. 55M1I14M1I60M4D39M9I163M7I15M 246/346 71.1% 364/94230402 0.0% 22/346 6.4% 12803199 NA +9901 chr4 + 190214555 65428393 65428392 65429041 649 TGCATTCTCAACACACTTAGTACCTAACCATGTTCTGTACTAAAGAAAGAAGGTAT------TTTAAAGGTTTCTTTCTCAAATAAAA----ATTCAATCTGCTCACTCAGACAAAAACCTACAATCACTCCATCTTAAAAGCCTGCAACTGGATCTTTTGATATATGACCTCAGTAAAGTTTTGAAACGACCATTTTACCAAAACCTG-GCCTTAAATGTCAGTAGTTCTAGAGAGACGGTATCTGTTTTAATAAAAAGAATTTATAAACTAAAATGCA---CCATTC--AGTATAGTTTGGTTTTTTTCAAA------------GACTTGAAAATCACAAAATATTAAAAATTAGTTGCTT-----------CCAGCAGGAAACGAAAGTAACTTAATTGCCAAGAAGTAATTTCTGGTGTGATTACA------------GTTCATA------GTTGAAATCATACACTTTAAATATTGTTTTGAAGTCACATTCACAGTGATATTAACTTGAAAAGAAAATGACAATAATAAAAATAGAAAACTATATCACTGGCACTCATAGT----ATTCTGTAAAATAACAGTGCAAATCACAGTAACAAATATTAAATGTAACAAGGTGTATAA-TGGCAACATGCCT----CCTTCTGAATAGCAAAATTAATCTCACACCAAATTAATTGTCATTGAATGTGTTTTCCATTCATTA chr4 + 94230402 52620139 52620138 52620803 52620139 52620138 52620803 665 TGCATCCTCAACACAGGAAGAGT---ACAATGCTCTGAACCTAGGAAGGAAGGTATAAGTATTTTAGAGTTTTCTTTGTCAAACAAAACGTAATGCAATCTGGGTGAGCAGACAAAG-CCTGCAATCATTCCATCTTAAAAGCCTGCAACTGGATACTGTGCTATATGATCTCAGGAAAA---TAAAGGGATTACTT----GAAACTTGCTTTTTAAAGGTCACTGCTTCTGCAAGGGCAGCTTCC-TTTTAATAGAAGGAA--GGCAAGCCACAGGGTAGTTCCATTTGGAGTATAACATG-------TAAAAAAAAACCACGTTGATGTAAGAGCCAGGATATATTAAGCTGTAATCGCTTATGTTTTTATGCAAACAG---ACAGAAGT--CTTGTTCA---------AACCTCTGCCTTGACTCTACAAAGAGTGGAGATACATAGCAATTGTTTACATCTTGCATTACAAATAAT-------CGGCACATTTGCATCGAT------TTCAAAGCAAAACACTCAAAATCAAAGAGGGATATTGCATCATTTATGCTTATGTTCGCCATTCCTGAGAACAGCCATGCGTGTGATGAAAGCAAACAGAAGATGTAACTAGGTGTGAAATTGGGAATGTACATTTTGCTTTCCAGAGACCAGGATTAATCAGGAAGCAAATAAA--ATCACAGAACTGATTTGACATTTTTTA .....:.........xxx..x::---..x...:....x..:x.:...:........------....:..x.......x.....:....----..x.......xx::xx........:-...:......:..........................x:.x..x.......:.....x...:---.:..:x..::.:..----:....:..-x::.....x....x.:x....:x.::.:.:.:x..:-........:..:...--x::..:.:.x.:x.:.---.....:--......::x..-------.x...------------..:x.:.:.::..x:.x.......:xxx..:.:....-----------.x.:...---..::....--...:x.::---------..::....x:x...:.x:.------------:.x....------...x.x...x.:..:.x:.....x.-------x.x......::..x:...------..x...:x....::x:x.x...x...:x:.:.x.:.::....:.x:::..:..:x.----....:xx.:..:.:.x:...:x:.x.:::x.:....:.xx.:.......x......:x..-...x..::.:.x.----.:...:::.x.x..::.......xx:x.x.....x..--:...:x...:xx:...xx....:x... 23M3D30M6I26M4I25M1D62M3D14M4D8M1I36M1D15M2D16M3I6M2I11M7D5M12I37M11I7M3D8M2D8M9D19M12I7M6I25M7D18M6D56M4I60M1I13M4I37M2D27M 397/599 66.3% 665/94230402 0.0% 116/599 19.4% 12808254 NA +3383 chr4 + 190214555 65465438 65465437 65465557 120 AAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAAGGAAGGAAAGGAAGGAA chr4 + 94230402 59372604 59372603 59372723 59372604 59372603 59372723 120 AATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAA ..x..x:....:..:..x:.x..x..x:.x:.:.:::.x:..:::.:......:...x..x:....::.:..x::x.:x..:.::.x...x..x:........:x..x:.x......:.. 120M 71/120 59.2% 120/94230402 0.0% 0/120 0.0% 6092834 NA +3251 chr4 + 190214555 65465441 65465440 65465684 244 AAAGAAAGAAAGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAAGGAAGGAAAGGAAGGAAAGGAAGGAAAGGAAGGAAAGGAAGGAAAGGAAAGAAAGGAAGGAAAGGAAGAAAGAAATTGAGTAAGAGCTCACCAAACAAAAAGCGGAAATAATAGGAATATGACAGATGTTGCCCATACGGGTTC chr4 + 94230402 15256151 15256150 15256382 15256151 15256150 15256382 232 AGAGATGGTGAAGAGAAAAACACAGAAAAAGGAAGAGAATTGGGTGCAGAAAAAAAGAGCACAAAAGAAGAGGGATATGGATGAAATATAGGAGATGGCTCAGGTGAAAGGACAAATGGAGGGCAAAGGGCAGCATAACTCTACAGAAGATGAGGGAGAGACAAGAAGAA--------ATTCTTACCTCACTGAACATGAATAAAAAAGA----GAACATTATATTGGTCGCCCAAATGAGCTC .:...x:.x:.::.::....x.x........:....:.:xx:.:x:x.:.:...:.:..x.x:......::::::x.x.:.x....x.x.:..:.x.:xxx:::x.......x::.x:.:::.x.....:x:.x.x::xxxx.x..:.:.x:.:...::..x.:......--------.x.xxx.x.....::....x:..xx::...x.----...:..x.:.xxx..:.....x.:.:.:.. 170M8D32M4D30M 126/232 54.3% 232/94230402 0.0% 12/232 5.2% 50209290 NA +3358 chr4 + 190214555 65465460 65465459 65465567 108 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAG----AAAG---AAAGAAA--------AGAAAGGAAAGGAAGGAAAGGAAGGAAAGGAAGGAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .....:.....x........x......:..:....-------....x.x.:x..::...::x....:----....---...:...--------.x::..:...:.x.:..:.x........::..::... 35M7I25M4I4M3I7M8I37M 79/108 73.1% 130/94230402 0.0% 22/108 20.4% 11453867 NA +3459 chr4 + 190214555 65465464 65465463 65465576 113 AGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAG----AAAG---AAAAGAAAGGAAAG---GAAGGAAAGGAAGGAAAGGAAGGAAAGGAAGGAAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .......:...x........x......:..:....-------....x.x.:x..::...::x....:----....---....:..xxx.x..---.:..:...:.x.:..:.x........::..::... 35M7I25M4I4M3I14M3I35M 82/113 72.6% 130/94230402 0.0% 17/113 15.0% 11453871 NA +3166 chr4 + 190214555 65465469 65465468 65465554 86 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAAGGAAGGAAAGGAAG chr4 + 94230402 75817436 75817435 75817521 75817436 75817435 75817521 86 AAGAAACAACAAGAAAAAGACAGGAAGAATGAGGAGGATAAAATGAGAAATAGCAATAAAAATGTCAGAAAAGGAGGGCAAGGAGG ......x..x:.:.:.....x..:.....x..:::::.x...:x:.....x.:x:.x.:...x.xx..:......:..x.....:. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% -10351967 -83878435 +3129 chr4 + 190214555 65468543 65468542 65468685 143 ATATATAATATATATATTATAT--ATTATATATATATATGTAAAATATATATAATATATATATTATATATATTATATATATATGTAAAATATATATAACATATATACATATATATGTAAAATATA----TATAACATATATACATATAT chr4 + 94230402 37244953 37244952 37245101 37244953 37244952 37245101 149 ATGCATATCAGTTGTTTTACATTGATTTCCTAATTATTTGTTCAGTGTTTAGCAGAGAAAAAATATATATATTCTGTCTATATATAGAGAATATACAATATATACATACAATAATATAGGATATAAACTAATGACATATGGATAATTAT ..::...x:.xx.:.x...:..--...x:x..xx...x...xx.:.:.x..xx.x.x.x.x.x..........x.:.x.....:..:.:x.....:..:.....:.:.:.xxx..:..::.....----x..:......:x.:.xx... 22M2I101M4I20M 91/143 63.6% 149/94230402 0.0% 6/143 4.2% 28223590 NA +30155 chr4 + 190214555 65490370 65490369 65490801 432 CACTTACCTGCTTGATTTGTGGTTACATTTACAGACACATACTGCCGGGCTCCTGGGCTCAAGTCGGACACTCCATTCACTGCCTCAATCTCAAAGGTATAGTTTGTGTGAGCGAGTAGATCCACCATCATGACAGAGGTGTTTTTCAGGCCGCTTTGCCGGGGAAGGTACCTGACATGACCGCCACACTCCTCACACACACCTGCATGGGAGTTGCACTTCTTGCATGCAATATAATATGACACGTCTTTCCTTCCACCAGTGTCAGCAGGCGGAATCCATTCCAGAAAGACACTAGTTTCATTAACATTTGAGATGGCATTCCGAGGAGCAGAGGGGGGTCCTGGTTTACAAAGTAAAGTAAGAAAAACATATTTT-AAGATGGTATTAATTAGGCATTATTTATCACACCAATTCCTGGTCTGAAGGAAA chr4 + 94230402 52650166 52650165 52650592 52650166 52650165 52650592 427 CACTTACCTGCCTGGTTTGTGGTTACATTTACAGACACAAACTGCCGGGCTCCAGGGTTCTGGTCGGACACTCCATTCACTGCCTCAATTTCAAAGGTATAGTTTGTATGAGCAAGCAGATCCACCATCATGACAGAGGTGTTTTTCAGGCCGGTTTGCTGGGGGAGGTACCTGACATGACTGCCACATGCCTCGCACAGACCTGAGTGTGAGTTGCACTTCTTGCATGCAATATAATAAGACACATCTTTCCTTCCACCAGTATCAGCAGGGGGAATCCATTCCAGAAAGACACTAGTCTCGTTAACATTTGAGATGGCACTCCGAGGAGCAGAGGGGGGTCCTGGTTT-----GCAAAGTGAGAAAAACACATGGTAAAAACAGTATT-ATCAGTCATCCTGCTCTCTACTACTCTTTGGTTGAAAAGAGA ...........:..:........................x.............x...:..x:...........................:.................:.....:..:....................................x.....:....:................:......:x....:....x.....x:..x.............................x.....:.................:........x..........................:..:..................:............................-----.:.....:.........:..xx.-..:.::.....-..:..x...:x.x:x::x:..:.x.:::....:x:..:..:. 350M5D23M1I11M1D42M 368/426 86.4% 427/94230402 0.0% 7/426 1.6% 12840204 NA +11437 chr4 + 190214555 65495383 65495382 65495595 213 CTTACTTGTGCATGCCATTGTGGGTGGATCAGACTCTCTCCTGAAATAATCCTTTTCACAGACACAAGAGGTTGAAGCTTCCTCATGGGTATAACTGTGAGGTGGACATTTGCCGCAGCTCTGGATGTGAGGTGAGGCTTTGAAGAACCCAGGTCTGCACACTGTCAAAAGA--AATAAGAGACTAAGCTTTTCCCTGGAACAGATGCAGTGTTT chr4 + 94230402 52657021 52657020 52657233 52657021 52657020 52657233 213 CTTACTTGTACAGGCCATTGTAGGTGGGTCTGATTCTCTCCTAAAATAGTGCTCTTCACACAGGCAAGATGTGGATGCTTCATCAAGCGTGTAGCTGTGAGGGGGACATTTGCTGCAGGATGGACTGTGGGGTGAAGCTTTGAAGAACCCAGGTCTGCATACTGTAAAAAGAAGAACCACAGACTAAGCTCTCCCAT--CACAAAATTAGTGTCT .........:..x........:.....:..x..:........:.....:.x..:......x.x:.....x..x..x.....x...x.x..:..:........x..........:....xx:x.:x....:.....:.......................:.....x......--..:x.x..........:.:..x.--x...:.xx:.....:. 172M2I23M2D16M 166/211 78.7% 213/94230402 0.0% 4/211 1.9% 12838362 NA +11213 chr4 + 190214555 65512881 65512880 65513233 353 TATTATACATGCCAATATTAAAACAATCTGCTGGCAAAATCTGGAAAAAAAAAACACTTTTAAAAGCCAGATGCGTGATGGCTT--TACTAGAATTGAAAGTCTGTTGTCCTATGATTAAGCATGCCATGCAGATTTGGCTCTGAGCCTG--TAGAGAAAGAGGGAATCTCAAATTATTATGTGGTTTGGACAATTGAAGTAATTTGTGGTTAGGAAATATGGCATTTGGGAGAAGTTACTCTGATGATTTATGTCATATGTGTTTGCTCTACCCACATTTTAGGACCTTAAAGTAA--TAAAAAGTTATAAATGTGGTTCTTG-AGAAGCAACTAAATATTCTTGATAGATTTTCATTT chr4 + 94230402 52665733 52665732 52666081 52665733 52665732 52666081 349 TATTACAGACAGCAATGCAAAGACCA---GTCAGTAGAATCTCCTGGAAAATAGGGTTCTTCAAAGCCACATGTTTGCTGGCATAACACTGCAA--AAAGGTTTTTAGTCTTCTGATTCAGTCGGCCATACAGAGTTGG-----AGCCTGGCCAAAGAAAGAAAGATTCTCTAATTATGCTGTGGTTTGGACAATTGCAACCAATTGTGGTTAAGAAATATGACATTTGGGAGGATTTATTTTGATGATTTATGTCCTCTGTGTTTACTCTACCAACATTTAAAGGATTTAGCTTCAATTAGTAAGCTGAACATGTGAAAACAGTAGGAAGAACTAAA-ATGCTTGAAGTATTTCCTTCT .....:.x.::x....::x..:..x.---.:::.:.:.....xxx::....x.:x::.:..x.......x...:x..x....x.--:...:x..--:..:..:.x.x...:.x.....x..:xx.....:....x....-----......--:.:.......::..x....x......xx.................x.::x.x.........:........:..........:.x...:.:..............x.x.......:.......x......x.:.:x:...:xx.x.--..:x...:.:x.x.....:xxx:x.-..:.:x.......-..x.....x:x....:.x.:. 26M3D55M2I8M2D43M5D6M2I145M2I25M1I13M1D21M 240/342 70.2% 349/94230402 0.0% 18/342 5.3% 12847148 NA +3018 chr4 + 190214555 65518235 65518234 65518280 46 ATTTTTTCTTACTTTTATTATCTTTTTCTTTATTATCTCTTTCTAT chr4 + 94230402 43615921 43615920 43615966 43615921 43615920 43615966 46 ATTTTTTCTTAATTTTCTTATTTTTTTCTTAATGATTTTTTTCTAT ...........x....x....:........x..x..:.:....... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 21902314 NA +3214 chr4 + 190214555 65523340 65523339 65523494 155 AGAAGACTATAACAACAAAGATCAGTACTTTTTCACTC----GGTTTGATATTTCATCTCTCTTTGCTAATGTAATGAAGAGAATCTGGTTAATTTTTCCATAGTTCTTTGGCTATCAGCCATCGTAAACTCAATGTGACAAAATATCCAGTTAGCTGG chr4 + 94230402 52670348 52670347 52670506 52670348 52670347 52670506 159 AGCAAAATCTGACAGGAAAGCATAGTGATATATCTCACATGTGCCTTGACATTTTGATTCTGTTTGTTAGAGTATGTGCACGGATCTGGCTTTTACTCCAAGACCTCTATAGCTGTCAGTCTGTGCAAACAGTATTTGACAGGATGTCCATTTAGCAGG ..x.:.x.x.:...:x....xx:...:x.x.x..x.x.----.x:....:....::x:...x....:..:x...xxx:x:x.:......:.xx.x:.:.x.x.x:...x.:...:....:.xx:.:....xxx..x.....::..:....x.....x.. 38M4I117M 93/155 60.0% 159/94230402 0.0% 4/155 2.6% 12852992 NA +22658 chr4 + 190214555 65528465 65528464 65529057 593 AAAAAAAGTCGTTAGTTTTCCCTGTTGCTTAAAAAAATCCGTAGAGAATTCAATGTGTACAGGCACTTGTTTATTAAAATCCATCTTTTATTGTTTAATTCACGAATTTCCAAGAGGGAAATACGTAGTTCAAGATATCCAGTGATTTGCATACTATGTACTTGTCAACAAATAGGTA-------GAGTTG---AGAT---------TACTTTCATT-TCCCTTTGTTTCATGTTATTTTTTTTCCAACTTTGGTTAAATCTGAATTTTAATTCTGCTCACATTCTGCCATTCCTAGGAAAGTGGCCTGAAGCGGACAGCAAGAGGAGTGCACTAAATCGAGCACTTAAATCACTTCTTTCCCCGTTCCATAACCAATTTAAAGACCATTCTGGCATTAATGCTCGGAAATAATATACTGTCAAGGCTGACACAGCAGAAGGACTCTACTTCAAATTATAGGATAGTCCAGGTGACCATGCAATTACAATTAACCCACTGCCCACAATGTC-AGTGATAAACAGCTATGCAAGTCATGGTCT-AGGAAAGCACTGAGGTAATATTGAAGTTATTTCTGAGGTTTTAGAGTGTTTAAAAA-CTATGTTCAATTAAAA chr4 + 94230402 52672341 52672340 52672943 52672341 52672340 52672943 603 AAAAAACGTTG--GGTTTTCTCTGCAGCTTAATAAAACCTGTGGGGAAT-CAGTGTA---AGGCTTTCATTCATTATAG-CTAGCCTTTAATGTTGGCGTCTGGATTTCCTGGAGGGGAACTGAGTAGTTTAGAATAATTAGTGATTTACATA---TAGAGTTGTCAACAAAGATGCACGGTATTAAGTTGCCAAGATGAAGGGCTCTGCGTTCTTGGTCGCTACTTTTGATTTGATTTTTTTCAAAACTCTGAC-ACATCTGTATTTCAATTCCACTCACATTCTGCTATCGCTAGTAAAGTGGCCTGAAGCGGACAGCAAGAAGAGAGCACTAAATCGAACGCTTAAATCACTTCTTCCTCAGTTCCCTGGCAGATTTAAAGAGCAGCCTGGCACTAACGCATTCAAATAATATACTGTTGGACCTGACACAGCAGAGAAACTCTGCTTCAAATCACACAATAGTCCAGGTGACTGCACAATTACAATTAACCTCCTGCCCGCTGTGCCTAATGACAAATGATCGTGTGAATGATAGGCTCAGAAAAGGACCCAGGTATCAAGAAAATGATTTCTGA--TTCTTACATATTTAAAAAGCCATTTTCAGTTAGGA ......x..:.--:......:...:x......x....:.:..:.:....-..:...:---....x:.::..:....x.:-.:.x.:....x....x:xx..xx..x..:.:::::.....x.:x......:.::...x::........:....---.:x.x...........x.x.:.-------:.....---....---------.:.x...x.x-..x..x:x...x..x.x........:xx....:..::-.x.....x....:.....::............:..:x....x..........................:...x............:.:...............:.:.x.....x.::.x:.........x..x:......:...:..x:xx..............::::x.............:::.....:........:.:.x:..............::::...............:x......:.x:..:.-.:...:...::::::..::.:.x..:.x..-..:....x..:x.....x:.xx:..:.x........--..:.x:x:.:........-.:..x....:...::. 11M2D36M1D7M3D19M1D73M3D22M7I6M3I4M9I10M1I37M1D255M1I30M1I36M2D18M1I16M 420/580 72.4% 603/94230402 0.0% 36/580 6.2% 12856124 NA +3179 chr4 + 190214555 65551236 65551235 65551311 76 GAGTGTATATAT------TTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGGAGTCAGCA chr4 + 94230402 27325499 27325498 27325580 27325499 27325498 27325580 82 GATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCAGTGCGAAACCAGCA ..x......:.:------...x..............:.........::..::......:x.x.:.xxx:.::.:.::..... 12M6I64M 54/76 71.1% 82/94230402 0.0% 6/76 7.9% 38225737 NA +3002 chr4 + 190214555 65551247 65551246 65551304 58 TTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGGA chr4 + 94230402 85834531 85834530 85834588 85834531 85834530 85834588 58 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAA .....x:..x.....x.................:.xx..:..x::...:....:.::. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -20283284 -73947118 +36478 chr4 + 190214555 65552068 65552067 65552710 643 TTTTCATTCACAGCAGAGGGCAGAAAAAGAACCAATA----TTACTAATAAAGCTGTCCGGCCCTGTGGCCTGATGTCAGAACAGCCAAAGCAGATGCTGACTTCATCAGTATTTAAGAATTACAGGAGCTGAGAATGTTTCCTACTTCAGCATTGTTCCAGTTCTTTGAACCAACTGCCATGGATTCCTGGAGCTTGACCACATTACAATTTTCACACTTAGCAACTGTAAAATTGTTAAAGCGATATCTTTCCACACGGTTTATCCGTTATTACTGCTAAGTTTGGCATACCACCTTAGTTACGGGCTTTAAATGCCACTTTCATCACTTCCCAGGGCAACCTGGGCCATGAAATCGGAAAATCAGATAATTTTCTGGTCCGTTTTCTTCTTTTTCTTTGGATGGCATTAGATTTTGCTACGCTTGACTGACAAATCTCATTTAGGATTCAAGGAGAGGCCTGAGCCCTGACCTCTTTAAGAAGTGGGAGGT-GAGATGTCTTAGGCAGTGATGAGGAAGAAAAGACCAATTTCAACTCCTCACATAA-AGGTAATTAGTCATTAATTCACACTGTAAGACATAAATACTTGTG-AATGTATAGAGTCTCTTAGTGTCAGGTCACAACATTATTTAAGATTCTTTAAA chr4 + 94230402 52687803 52687802 52688432 52687803 52687802 52688432 630 TTTTTATTTTCAGAGGA------AAAAAAAACCCACACGTGTCTTTAATGAAGCTGTTCAGTCTT--------ATGTTTGAACAGCAAAAGCAGGAGCCGACCTCAGCGGTGTTTAAGAGTTACAGGGGCCGAAAGCATTTTCGCGCTGAGCG--ATTCCAGCTCTTTGAACCAATTGCCACAGATTCCAGGAGCTTGCCCACACTACAATTTTCACACTTAGCAACTGTAAAATTGTTAAAGCGATATCTTTCCGCACGGTTGCTCTGTTATTAGTGCTTAGTTTGGCATGCCACCTTAGTTACGGGCTTTAAATGCCACTTTCAGCACTTCCCAGGGTAACCTTGGCCATGAAATCGGAAAATCAGATCATTTTCTGGTCTGTTTTCTTCTTTTTCTCTGGATGAGATTAGATTTTGCTACGCTTGACTGACAAACCTCATTTGGGATTCCAGAGGAGGCCGAAGCCCTGACCTCCTTAAGGAGTGGGAGGCAAAGATGTCTCAAGATATGATGAGGAAGAAAGAACTAATTTCAACACACCACATAACAGGCAATTAGTAATTAATTTGTACTGAGAGAAAAACACACTCGCGAAACGTTCAGCAAGTCTCCCTGGAAAGTCACAGCCTTTTAT----TTCTCTAAA ....:...:x...x:..------.....:....x.:.----.:x:....:.......:.:.:.:.--------....:x.......x.......:x..:...:...x.:..:.......:.......:..:..:.:::...:.xxx:.x...:--:......:............:.....::......x........x.....:..................................................:.......xx..:.......x....x..........:..................................x............:.....x........................x...........:................:......:x.............................:.......:......x..::......x:............:.....:.........:-:........:.:.xx:..............::..:.........x.x:.......-...:.......x.......:::....x:...x.x.x.:...:.:.-..:..x:..x:xx...:xx..xx.:......:.x..x.x.----....:.... 17M6D14M4I24M8D80M2D339M1I55M1I45M1I40M4D9M 507/623 81.4% 630/94230402 0.0% 27/623 4.3% 12864265 NA +4804 chr4 + 190214555 65566568 65566567 65566704 137 TTTTTTTGATGGAAATCTAGAGAGGCAGCAAAGTGCTACTCCAATTTAATTCA---CAGTAGAGGCACTGAGCGTATGAGCTTTAAGCTCTAAGGTGGTTAGAAACATCTGCTGGTTAGCAATGCCTCTTCCTGTCAGTT chr4 + 94230402 52696581 52696580 52696719 52696581 52696580 52696719 139 TCCTTTTGAGCAAAATCATGACAGACAGCACAGCGCTGCTCCAAATTAATTCACAGCAGTGGAGGAGCAGGAAGGA-AAGCCCATGGCACAGAAGCAGTCAGAAGCATCTGCTGGTTGACCATGCCCACTCCTTCAAGTT .::......xx:.....xx..x..:.....x..:...:......x........---....:....x:.x.::x.x.-:...::xx:..x.x:.:.::..:....:............::.x.....:x:....x:x.... 53M3I20M1D63M 92/136 67.6% 139/94230402 0.0% 4/136 2.9% 12869987 NA +3370 chr4 + 190214555 65574607 65574606 65574712 106 TATATACATATATATATATACACATATATATATACACATATATATACACATATATATATACACATATA--TATACATATATATACATATATATACATATATATACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:.::.:.:.x.x.:.:x:.:...x.....::..x:.:......x.:.:..:x.....::..:..--:..:.x.x.:.:..:..:.:...:x....::..:..:. 68M2I38M 65/106 61.3% 108/94230402 0.0% 2/106 1.9% 44465413 NA +3137 chr4 + 190214555 65575837 65575836 65575919 83 CGTAGTGATGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGGTGGAGGATGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....:..x:..--....:.:...........::........x.xx.x...x::........::::..x.xx:..x..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -10457360 -83773042 +3354 chr4 + 190214555 65575953 65575952 65576069 117 GTGACAGAGCGAGATTCCATCAAAAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGA chr4 + 94230402 51148361 51148360 51148475 51148361 51148360 51148475 115 GTGGCAAATGGCGTTTACA--GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ...:..:.xx.x.x..x..--:...:.::...xx.x.....................x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:......:.::.. 19M2D96M 72/115 62.6% 115/94230402 0.0% 2/115 1.7% 14427592 NA +3077 chr4 + 190214555 65575975 65575974 65576079 105 AAAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 89498610 89498609 89498714 89498610 89498609 89498714 105 AAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGA ....::..x.::..:..:x:.:.:x.x:::..:.xx..::.:..x..:..:x...x.::..::..:x::.x...x........:.:....x.:.x.:..:..... 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% -23922635 -70307767 +3256 chr4 + 190214555 65575995 65575994 65576118 124 AGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ...:.:.:...x........x......:..:....-------....x.x.:x..::...::x....:x:xx...:xxx..:....xxx.x::x.x.:.:.:...:x..:...x:.:::..:....:..... 35M7I89M 77/124 62.1% 131/94230402 0.0% 7/124 5.6% 11564402 NA +3399 chr4 + 190214555 65575999 65575998 65576139 141 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA--AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAG---------------------AAAAGAAAAGAAAAGAAAG chr4 + 94230402 54011593 54011592 54011763 54011593 54011592 54011763 171 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAACTTAATTCCGTTATTCTTTACAAAAGAATAGCAAAAGAAG ...:...:...x........x......:..:....-------....x.x.:x..::...::x....:x:xx:..:xxx...:...xxx.x..x.--:......::x....:.x...:::....:......:---------------------.......x..x...::... 35M7I52M2I35M21I19M 95/141 67.4% 171/94230402 0.0% 30/141 21.3% 11564406 NA +3248 chr4 + 190214555 65576005 65576004 65576086 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:.:x.x...:..x...:..::.x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 24463827 NA +3110 chr4 + 190214555 65576009 65576008 65576083 75 AGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...-......x:..x...x:.....:.:x:.:x.x...x.x:............::...:. 18M1I57M 53/75 70.7% 76/94230402 0.0% 1/75 1.3% -6025017 -88205385 +3374 chr4 + 190214555 65576020 65576019 65576177 158 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAGGAA chr4 + 94230402 33877425 33877424 33877575 33877425 33877424 33877575 151 AAGTAAAAAAAAAAAAAAGGAATAACAATTGAAACTAACAGAAGAAAATGAATTAGGAAATATTGATAACAACATAAATAACAAAAATACCAAGGAAGAAGACAAACAGTGCAAAG-------GCAGGAGGGAGAAATGGAAAAAATCCAGAAAGGAA ...x..:...:...:....:..x..x:.xx....xx..x.:.......x:..xx.::.:.x.xx:.x.:x..x:x...x..x.:...x:xx...:..:....x..:x.:x.x....-------.x.::..::...:.x:..:...:.xx..:...... 116M7D35M 92/151 60.9% 151/94230402 0.0% 7/151 4.6% 31698595 NA +3006 chr4 + 190214555 65576025 65576024 65576106 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:.:xx.x...x..::......:.:x.x...:..x...:..::.x... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 24463847 NA +3659 chr4 + 190214555 65576027 65576026 65576152 126 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA-----AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:.....x.-----...x.x..x...::.:::x:...:x:xx:..:xxx...:...xxx.x..x.x::......::x....:.x...:....:.....:... 38M5I88M 81/126 64.3% 131/94230402 0.0% 5/126 4.0% 11564434 NA +3022 chr4 + 190214555 65576029 65576028 65576104 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.::............:.::.:......x:x..::...xx.xx.x::.:.:..x:.....:....:. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 27497251 NA +3232 chr4 + 190214555 65576029 65576028 65576103 75 AGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...-......x:..x...x.:..:....x::.x.x...x.x:............::...:. 18M1I57M 54/75 72.0% 76/94230402 0.0% 1/75 1.3% -6024997 -88205405 +3426 chr4 + 190214555 65576033 65576032 65576108 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...x..::..x...x...x.:..:....x::.x.x...x.x:............::...:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -6024993 -88205409 +3276 chr4 + 190214555 65576051 65576050 65576144 94 AAAGAAAGAAAAGAAAAGAAAAGAAA---AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGA chr4 + 94230402 15855381 15855380 15855477 15855381 15855380 15855477 97 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAA .....:...:...x::.x..:.:.:.---:..x...xx...::..::.xxx.:.:::.:...:......:.:......:.x..:......x....:. 26M3I68M 61/94 64.9% 97/94230402 0.0% 3/94 3.2% 49720670 NA +3784 chr4 + 190214555 65576051 65576050 65576175 125 AAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGA-AAAAGAAAGA------GAGAGAGAAAGTAAAGGAAGG chr4 + 94230402 10269762 10269761 10269893 10269762 10269761 10269893 132 AAAGAAATATCAGAAATGTAAAGGTATTTCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .......x.xx.....x.x....:x.xxxx..:x.:.:...x::x:.:.:.....:....x.:.:...x:...:.xx........x.x...::.-...:......------.::.....:.:....x..... 94M1I10M6I21M 84/125 67.2% 132/94230402 0.0% 7/125 5.6% 55306289 NA +3177 chr4 + 190214555 65576052 65576051 65576156 105 AAGAAAG--AAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAA--------AAGAAAGAGA chr4 + 94230402 37755103 37755102 37755217 37755103 37755102 37755217 115 AAGAAGGCAAAAGGAAAACAAAACAAAACACACACACACACACAAAATGAAAAAAAAAGCAGAGGAATGAGAACAGAGTAGGAAAAAATGAAGAGCACTTGCTCCAAGAGAGAGA .....:.--...:.....x....x....x.x.x:x.x.x.x.x:...x.....:.....x.:..:..x:....x...:x..:...:..x...:::x.--------....:..... 7M2I88M8I10M 73/105 69.5% 115/94230402 0.0% 10/105 9.5% 27820949 NA +3699 chr4 + 190214555 65576052 65576051 65576208 157 AAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAG-AAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAGGAAGGAAGGAAGGAAG---GAAAATAAATGCAGAAAA chr4 + 94230402 10269758 10269757 10269913 10269758 10269757 10269913 156 AGGCAAAGAAATATCAGAAATGTAAAGGTATTTCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAG-----GAAAGAGTATTGGGAAGAGAGAATAAATGAAGGTTGTCAATAACTGCATAAAA .:.x..::...x.xx.....x.x....:x.xxxx..:x.:.:...x::x:.:.:.....:....x.......x:...:.xx...-....x.x...:..x....-----..:.:....xx..:.:..::...x:..x....---.xx.....x....x.... 84M1I18M5D32M3I18M 100/152 65.8% 156/94230402 0.0% 9/152 5.9% 55306294 NA +7484 chr4 + 190214555 65577424 65577423 65577663 240 TTAAAATCTGCTTTATTATGTGTAATGTAATAGTAGCTTATATAGTA------AGTTACTACGCATTTGTTGAGGCTTATAAGTGACTGATGTGGTGTTTAGAAACCAATACAGGAAAAACCATTCCAAGTCAGTTCACTTACATAATTATAATTTAAATCTAATTTACTTATTATTCCTTAGTCTATAATAAAATTTTAAGCAAATTTTGTATATATACCATTATTCATATTTTAATTTGAAATA chr4 + 94230402 52706834 52706833 52707072 52706834 52706833 52707072 239 TTAAAATTTCTTTGCCTTTATGTCAT--AATACCATGCAACAAAGTAGCATACAAGCACTGCGCATTTACTGAAGCTCATAAGTTATTGATGAAACTCTTAAGGACTAA-GCTGACAAAGCCATTCTACTTCTGGTGATTTACATAATTATAATTTAGGCACAATTTACTTATTATTCTGCTGCCTATAATCAACTTTTAAGCAAACACTCTGTTCTCATCCTT----ATATTTTAACCTGAAGCA .......:.x:..xx:.x.:...x..--....x:.xx:x.:.x....------.:x:...:.......::...:...:......x.:.....x:::x:...:::..:..-:.x.:x...:......:.xx..x.x.x.:..................:::x:................:x:x.:.......x..x...........:x:.x.:.x:x:.:.x..----.........::....::. 26M2D19M6I56M1D114M4D18M 157/233 67.4% 239/94230402 0.0% 13/233 5.6% 12870590 NA +16965 chr4 + 190214555 65583470 65583469 65583768 299 CAATTTATATATCACCAATAAAATTCAGTAAAATTAAACATGACAATAGTTTATCAAGGTTTTGTTACAAGAAAAACAACAATTTGTAGTTGATAAAGACCCCACAGAATAAAAGACTGATTGCAATGATGAATAATGCATATCGCCTATGGTACTAATTAACCTTGTACTCCAGGAAGATATTACAGAACAATAAGGCTAATTTGAATGTGGTCCGGCACTTTTCCCTATGGCTTGTGGTTATCACCCTTCAGAATACGTAAAATTTGATTTTGTTAAAAAAGAAACATATCTTTGTT chr4 + 94230402 52709118 52709117 52709412 52709118 52709117 52709412 295 CAATTTATATATCACAAAAATCATTTGGCAGGATTAAATATGAAAATAATATATCATGGATTTGTTATTGGAAGGGAAACAATTTGCTGCACACGACAGCCCAACAGAAGAAAAGCCTGATTGCTGTGATGAATAATGCATATTGCCTATAGTACTAATTAACCTTGTACTCCAGTAAGATATTACGGAACAATAAGGCTAATTTGAATGTGGCCCGACACTTTTCCCAGTGGCATCTGGAAATCAGCCTTTGGAACATGTAAAATATGAATTTGTTAAACCAAAAGC----CTTTGCT ...............x..x.xx...::.:.::......:....x....:.x.....x..x.......:x:...:::x.........:x.:xx.::.x::...x......x.....x........x:.................:......:........................x..........:..........................:...:..........x:....x.x...xx....x....::...:.:.......x...x.........xx.:..:.----.....:. 288M4D7M 234/295 79.3% 295/94230402 0.0% 4/295 1.4% 12874352 NA +13669 chr4 + 190214555 65589278 65589277 65589730 453 AAATTCTTATTCTGAATTTAAATTTTTTTTCACCTGAATAAAGACTGAAGCCCTCCTCAAATGTAAGTACATTATTCTATTGCTGTTAGTCTGTGTGGGCCTTGAGGAGCACAAC-CTGACTTAAATGGGCTCTAT---TATTACTGTTA---AAGTTCCCTCCCCACCTCCCTCTGTAACCACTGGCTGTGCCAAAGAAAGCCACTGCTGTCAGAAAACAAGG---AGTCTTCACTGTTGTGACATTTCATTTATCTGGGCAGCAACATTCTTGAAAGGCAACTTGCCTAGCTCTAAGTGAAGTATGGAAGACAATCAAATGCAGTTAAGCAAACCGGTGTTGACATATTAAATCATGCTTGAACCAAGAGAGCAAACACAGATGACACACAGAACCTTCTAAAGAGAA-----TTTAAAATAAATAAATAATACAGGTCAGTCTGGTTCTAAAAAA-----AGAAGCTTTT chr4 + 94230402 52711151 52711150 52711589 52711151 52711150 52711589 439 AGAATCTCAATCTGGACCAAAATTCCTTTTCACATAAACAATTGATTAAATCT--CTCAAGCATAAGCTTGTC--TCCACATCTGT------GTGTGGGCC------AATGCTGCTCTGACCCAAGCAGCATCTATAGGCATTACTGTTGGTTAAATTCCCT-----------------ACTGCCAGCTTTGTTAGAGGAAGCGACC-CTGTCACAACACAAGAGCAAGTCCTAACTTCTGTGACACTTCATTTGTCTGGGCAGCAGCATGCCTGGAAAGATGACTGCCCTGCTTTAGTGGAAGTATGCAAGACAATCAAGGCCAGCTAAGCAAACCAGTTTTGACATATTAAATCATGCTTGAACTGTGAGAGCAAAGCAAAATAATGTAAAAGCTCTTCTAAAAAAAAAGTCTTTAAAAATAAATGGATGATACTGGCTGGCTTTGTCCTTAGAAAGAGGGGAAAGCCTTT .:.x...:.x....:.::x.....::.......x.:..:..xx:x.x..::.:--.....:::....:x::.:--..:.:xx....------.........------.:::.x:.-.....::..:::.xx.....---:.........:---..:......-----------------..::.::...x..::.:..:....x..:-......x..x.....:---....:.x...x:.......:.......:...........:...x.:..:..:.xx:x:....:x...:..:xx........x...........:xx...:..........:..x.........................::x.........xxx.:..:.:::.x.::x:........:.:..-----..x.........::..:....x..:::.::.x..:..x.:...-----::....:... 53M2D18M2D11M6D9M6D8M1I20M3I11M3I9M17D28M1D16M3I183M5I43M5I10M 293/419 69.9% 439/94230402 0.0% 54/419 12.9% 12878127 NA +11235 chr4 + 190214555 65596787 65596786 65597108 322 AGGTTCCTTTTGTTACATATAATAACATACTAAA-----TAGAACGATAAGTTCAACCCCTTTGATGTTTTTTGGTAATGTCCCTAATTAAAAATAACTAGGCTCTCTAATCCATAATTGCATGGACACCTAATATACCTAATATATTTCCAGCCAATTTTGCTTCAATCATAAATATGCACCAGAAGTACGAATGATCGACATTCTACTCCCTGCTGTAACTGTACTGTTTCTGAATCAAGGCTCTTTCTTGAATTGGGTATTTTCACTA-CATTTTCCTCGCTGTGCAATCATCTCCCAGTTGGACAATTAATAAGTACTTTTTCT chr4 + 94230402 52715092 52715091 52715415 52715092 52715091 52715415 324 AGGTGATCTCCTTTAAATGTGAAAAGATAATACAGACTGTGTAGCCAAAAATTCAGCTATTCTGATGCTGGTTGGTTTTGTGCCTAATTAAAATTAACTAGGCGCTTCAGCTCATAATTATATGAACACCTACCACGC----TATACTCCCAGCCAATTTTGTTTTAATCAGAAAAACGCACAAGAAGGATGAATGATGGGCAAAGAACTCCCTGGAGGGGCAACAGTATTTCCAAATTCAGTATTTTCCATATACTGAACATTTCCATCAGTGTTTTTCTTGCCATGGAATCACCTCCCAGTAGAACAATTAAGAAGAGGGtttttt ....xx::.::x...x..:.:.x..x...x..x.-----.:x.:.x.x..:....:.:x:.:.....:.xx.....xx...x...........x.........x..::.:::.......::...:.......x:.::.----....:.:.............:..:.....x...x.:....x.....x.:.......x.:..xxxx........xx.x::.x::.x.:....::...:x..xx.:..:.x.:x.:..:::....:..::.-::....:..:..::..x.....:........x.:........x...x:xx....:. 34M5I99M4D129M1I56M 213/318 67.0% 324/94230402 0.0% 10/318 3.1% 12881695 NA +46413 chr4 + 190214555 65601629 65601628 65602312 684 GCAAACTCTTACCTTGACAGGTGCCATTTTTCTCTTCATATCCTGCCTTGCACATGCATTTCCCGATGGGCACCAGCCACTCCCCTTCGGCGCTGCAGTGCATTTTGGGAGGTTCATCGGTCACAGAATGGTTGACACAGGAGCCTGACACTTCGAGCAATTGGGAAGAATCAGCTCCAGTGATGGTGTCAGGGAAGACAGCCAAGTGTCGTACCACAGAAGGGCATTTTTTATAGTATACACGCACAGAAACCAGAGCAATGCAAGCACCAACATCTTGAAAAGCAAGATAAAATCCCTTTTTGCTTAGAGGTCCTACATCTCTGACCTCTGTATTCAGTTTCATAACACGGTCACCAAGATCAAGTTCTGTAAAGCTTTCATCGGCAGCAATGGTATCAATTTTGATGTATTGGTTTTCCTTGATGTTTCTCCCATTCTGATCATCTGACTCAAAGTAATACATATTAAAGGTTTCCTTACAGGTCCCCAGTCCTCCAGGAAGGCTGTTGCAGTCCCGCAGGGTAAATTTGAGTTCTATGAAGATTCTGGAAGCACCTTCATTGGAGATCCAACTGGTCAAAAGCCAGTTATTCTGATTCTGTTCCATCACTTTGCATACTTGGTATGTGTGGATAGGGGCATAATTTTCATCCACTTCACCAATCTCTTCCCACTGTACAA chr4 + 94230402 52722781 52722780 52723464 52722781 52722780 52723464 684 GCAAACCCTTACCTTGGCAGGTGTTGTTCTTCTCCTCGTACCCTGCCTTGCACAAACACTTCCCGATGGGCACCAGCCATTCTCCCTCAGCACTGCAGTGCATCTTTGGTGCCTCATCAGTCACTGAGTGGTTGACACAGACGCCTGACACTTCTAGCAGCTGTGAGGAATCTGCTCCTGTGATGGTATCTGGAAAGCGTGCCAGGTTGCGGATCACTGATGGGCATTTCTTGTAGTACACACGCACAGAGACCAGGGCAATGCAGGCGCCCACATCCTGAAAAGCAAGGTAAAATCCTTTTTTTGTTAGAGGCCCAACATCTCTCACTTCTGTGTTTAACTTCATAACTCTGTCGCCGAGGTCCAACTCCGTGAAGCTCTCATCAGCAGCAATGGTATCTATCTTGATGTACTGATTCTCTCTGATGTTCCTCCCATCTTCATCATCTGACTCAAAGTAGTACATGTTAAAAGTCTCCTTGCAAGTCCCAAGTCCTCCTGGAAGGCTGTTACAGTCCCTCAGGGTGAATTTGAGTTCAATGAAGATGCGGGATGCCCCTTCATTAGAGATCCAGCTGGTCAGAAGCCAGTTGTTCTGATTCTGTTCCATTACCTTGCATACTTGGTATGTGTGTATCGGAGCATAGTTTTCATCCACCTCACCAATTTCTTCCCACTGTGTAA ......:.........:......:::..:.....:..:..:.............x:..:....................:..:..:..:..:...........:..x..x.x:.....:.....x..:............:x............x....::..x..:.....x.....x........:..x..:...xxx....:..xx..x.:...x..x........:..:.....:...........:.....:........:..:..x.....:...........:........:.....xx.......:..x........x..:.....:..:.::........x.x...:..:..:..x.::..:..:.....:.....:..............x..:........:..:..:..::.......:.......::.x..................:.....:.....:..:.....:..:.....x........x...........:.......x......:...........x........x.x...x..x........:........:.......:.........:.................:..:....................x..x..:.....:...........:........:............::.. 684M 563/684 82.3% 684/94230402 0.0% 0/684 0.0% 12878848 NA +3128 chr4 + 190214555 65608364 65608363 65608446 83 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCATGAGGCGGAGCCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:...........::........x.xx.x...xx:.x........x:..x:xx:.x...:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -10424833 -83805569 +10374 chr4 + 190214555 65611627 65611626 65611907 281 TGCTCTCTGTTCTTTTTTCAGTCCTCATTTTTCAGTAGA--TAATATTATGCTTCTGATGCAAGATTTGACAACAGCACCCATAAATCAATTCTATATCTCACATTAATGATGTTCTTGTAATCAGTGGCTATTCAACACAAATTTCCATCGCATTTTTTTTTGTTGGAAAACAGCCACATTAGGGCTGTT-AGCTTTCTCAAATGTAAGTGGCTATATTGCCATAATACATAATAAAGTGCACTCCAGCCACTTGCCA-AAGCAGTATTAAAGACATTCTATAG chr4 + 94230402 52732024 52732023 52732305 52732024 52732023 52732305 282 TGCTCCCTGGTCTCTCATCCACCCAAAGCTTTTCATAGAGATAATATTACATTCATGGCTCAGGTCCTGACAACTGCACCCATAAATCAATGTCAACTTTTGCATTAATCATCTTTCTGTCATCAGTGGCTATTCAGCACAAATTTACATCTCATTTATGTTGGCC---AAACAGCCACATTAGAGCTTTGAAGCTTATTCAGGCTTAAATGATTATATTCCCCTAATAAACACTGAAGCCCTCTCAGTCCGGTCACCGTGAGCAGCATTAATGACGTGCCACGG .....:...x...:.:x..x::..xx.x:...:x:....--........:::.:x..::x..:.x::.......x................x::.xx.:.::.......x..x..::...x...............:.........x....x.....x.x..x.::---...............:...x.x-.....x:...:::x...:..::......x..x.....x.:.x.:...:x.x...x:x..:x.::..:-:.....:.....x...:.x.:.::. 39M2I125M3D22M1I67M1I25M 192/278 69.1% 282/94230402 0.0% 7/278 2.5% 12879603 NA +3103 chr4 + 190214555 65611994 65611993 65612047 54 GCGATAGAGCGAGACCCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ..:.x:....:....xx:..........::.:...............x.x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -22770714 -71459688 +11098 chr4 + 190214555 65628559 65628558 65628921 363 AAAAAATAAACGTTATAA---GATGAGATA--------AATGCAGCATACAGCCACCACTATTAGTTACCTTTAAAAATTTCATTATTCAATCTGGCATCATAATAAAGCAAACAGCAAACTAGA-GAAGTTTGTTTAATGAAGTGACTATATTTCAGGATTATACTCATGGTTATGTCTTTAACTGTGCAGATTGGAAGTATTTG--------TGAATAATCTTGAATTATTTGAATAATTTATAAGCACAGCAGAGCCTG-TGTGATTCATTGGCTTATCGCACATTCGCATGTTATAATCAACCAA---AGTCCATGCATGCC---CAATATACAAAACTCTCTTAAATTTTTTTTTCTA-ACAGCCTTGGCAGCTGTCCTGTCCTGA chr4 + 94230402 52737690 52737689 52738073 52737690 52737689 52738073 384 AAAAAAAAAACTTCACAATTAGCAGGGATACAAAAGAAAACAAAATAGGCTGCCACTAAAGTTAACTACAGAGGAACATTCGGTTATTCAATCTGGCATCAAAACAACACAAACAGTAAACCAGAAGGAGACTGT--AATGAAGTGACTATCTCGCAGGATTATACTTGTGGTTACGATTTTAATTGTGTAGTCTGGAAGGATTTGCAATAAACTAAATAATCTTATGTTATTGTAATGATTTTTAATCACGACA---CTTGCTATGATTTACAGGCTTACTATACATTTGCA--TTGCAATCAACTAGAACAGTCAGTGCATGCCCCACAACACCTAACAGCACTTAAAATTATGTCTTGCATAGAGCTCCAACAGCTGCCCAATCATAA ......x....x.:.:..---.xx.:....--------..::x.::.x:.x.....:.xx:...::...xxxx:..x...:x:..................x..:..x:.......:....:...-.:..x:...--..............x.:x............::......:.x:.....:....:..x:......x.....--------.:.........:x:.....xx...:....x...x...::..---.:..-.:.....:.:x......::::.....:...--..::.......:.:---....x:........---...:.:x:..x.x:x::.x.....x.x.:..x:.-.x...:::::......:..x:..x.:. 18M3I9M8I87M1I9M2D69M8I41M3D4M1I30M2D14M3I14M3I34M1I27M 250/356 70.2% 384/94230402 0.0% 35/356 9.8% 12890869 NA +3048 chr4 + 190214555 65630061 65630060 65630099 39 ACACACACTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:.x.x.....................:.......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 53028760 NA +3048 chr4 + 190214555 65630063 65630062 65630101 39 ACACACTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:.x...............x.......:.......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 53028762 NA +3048 chr4 + 190214555 65630065 65630064 65630103 39 ACACTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:...............x.x.......:.......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 53028764 NA +3087 chr4 + 190214555 65640246 65640245 65640303 58 CCATGTGTAGACATTGAAGTCATTGCTCAGTTTTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 51392783 51392782 51392840 51392783 51392782 51392840 58 CTGTGTGAATACACAGAATTCATCGTTCAGTATTTTTCTTTTTCTTTTCTTTTTTCTT .::....x.x...:x...x....:.:.....x....::.....:....:......:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 14247463 NA +6469 chr4 + 190214555 65643355 65643354 65643476 122 AAACTTACCCCATTTTTTGGAAAAGCAATCCATCCCAGGTCCCCCATGACAGTGCGTGAATCCAATAAATTCACTGAAAAGAAAAGAACAAAAAACTCAGTGAAATGTATATTATCATGAAT chr4 + 94230402 52748570 52748569 52748685 52748570 52748569 52748685 116 AGACTTACCCCATTTTTTGGGTAGGCTATCCATCCTAGATCCCCCATTACTGTGCGTGAGTCCAGTAAATTCACTGAAAGTAAGA----AAAAAACT-GGTAAGGTGTATG-TATTATAAAT .:..................:x.:..x........:..:........x..x........:....:..............:x..:.----........-:..:.::.....:-...:..:... 85M4D8M1D13M1D10M 95/116 81.9% 116/94230402 0.0% 6/116 5.2% 12894785 NA +9202 chr4 + 190214555 65647422 65647421 65647627 206 AAAAAGAGGGGATTGGCAGTAATAGAGCATAGTCACTAAGTATCTTCTGTGCTATAATTACAGTAATTAAATTGTTCTGAACAGTATATATGCTTGTCGTAAATTGCAATGAATACA---TGAGTATTGATCT-TATTGTACAACTTAATTAAAACTTGTCTGGGAGAACCCACTAATGAATATAATTAGAGGAAATGTTTGATGCCACA chr4 + 94230402 52750934 52750933 52751139 52750934 52750933 52751139 206 AAAAAGAGAAACCTGCCAACAAAATGGCAGGTTACCCAAATTCCTCCTAT--TACAGTCACTGTAATTAAACTGTGCAGAAGAGTATAT--TCCTGTTGTAAAATGCAATGGATGCAAAACAAGTATTGATCTACATTGTACAACTTAATTAAAACTTGTCCCGAAGATGCTACTAATGAATGTAATTAGATGGCATGTTTGATGCCACA ........:::x:..x..::..x.x:...x:x.xx.:..:.x:..:..:.--..:.:.:..x.........:...x.x...x.......--x.:...:.....x.......:..:..---::...........-:..........................:x.:...xx.:..........:........x.:x............... 50M2D37M2D26M3I13M1I76M 153/202 75.7% 206/94230402 0.0% 8/202 4.0% 12896488 NA +3035 chr4 + 190214555 65659315 65659314 65659376 62 AACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGAAAGGTAAAGCATA chr4 + 94230402 38128981 38128980 38129042 38128981 38128980 38129042 62 AAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCAAAATATA ..x..:x..x.....x.:...:......x...:.....:....xx.....x..:...::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 27530334 NA +5709 chr4 + 190214555 65669520 65669519 65669636 117 CTCCGCCCCAGGTCGCCACGGTCCCCACCCCCATCTCCCTACCTTCGTTGCTGGGGCTGGCCAGGAGGGTCCGGAGTGCGGCGCACAGGAGAAGGCACGTCCAGAGGGGAGCCCGTC chr4 + 94230402 52762700 52762699 52762805 52762700 52762699 52762805 106 CTCTGCCACCGGCCGCCCCG-TCCCCGCTC----------ACCCTCGCTGCCCGGGCTGGCCAGCAGGCTCCGGAGCGCGGCGCACAGCAGCAGGCACGTCCAGCCGGGAGCCGGCC ...:...x.x..:....x..-.....:.:.----------...:...:...:x...........x...x.......:...........x..x............xx.......x.:. 20M1D9M10D77M 86/106 81.1% 106/94230402 0.0% 11/106 10.4% 12906820 NA +3172 chr4 + 190214555 65676307 65676306 65676400 94 AAATATATATATTTTATATATATATTTATATATAAATTTATAAATAAACATATGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857563 6857562 6857656 6857563 6857562 6857656 94 AAGTATTTATGGTATAAGTATCTGTTCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ..:...x...:x.x..x:...x.:..:xx:xxxx....:x.x..x...:....:::..:.x.::....x..........x...........x.. 94M 62/94 66.0% 94/94230402 0.0% 0/94 0.0% 58818744 NA +3695 chr4 + 190214555 65676309 65676308 65676437 129 ATATATATATTTTATATATATATTTATATATAAAT--TTATAAATAAACATATGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATAT chr4 + 94230402 68837014 68837013 68837144 68837014 68837013 68837144 131 ATAGTTACAGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT ...xx..:.x..:..:.:.....x:...:...x..--:..:.x.:.x..::.x.xx:.x:..xx..x:.x:xx..:x.x::.....:.............:.:.:.x.....:...:...:..::.:.:.. 35M2I94M 80/129 62.0% 131/94230402 0.0% 2/129 1.6% -3160705 -91069697 +3059 chr4 + 190214555 65676359 65676358 65676420 62 TGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACA chr4 + 94230402 27325502 27325501 27325563 27325502 27325501 27325563 62 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ......:.xx.:x.:x..x:.:...........:.........::...:......:x.x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 38350857 NA +3065 chr4 + 190214555 65676368 65676367 65676451 84 ATATATATATGTGTGTGTGTGTGTGTGTGT----GTGTGTGTATATATATATACACAC------ACACATATATATATATAAAGCCTGGCTAAT chr4 + 94230402 85834534 85834533 85834627 85834534 85834533 85834627 94 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAAT ..x:..x.:...x.................----:...:x.:...:....:..x.:..------.::..:.:...:.:.:.x:......xx... 30M4I24M6I30M 60/84 71.4% 94/94230402 0.0% 10/84 11.9% -20158166 -74072236 +3173 chr4 + 190214555 65676369 65676368 65676437 69 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATAT chr4 + 94230402 39937175 39937174 39937243 39937175 39937174 39937243 69 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGAT ...............::...x......::xxx.x.::...:xxx:.......:...:.....:...x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 25739194 NA +3148 chr4 + 190214555 65676375 65676374 65676437 63 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x::.x.....x...................xx..:..x:..:...:.::..x...:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -20158158 -74072244 +3180 chr4 + 190214555 65676375 65676374 65676437 63 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATAT chr4 + 94230402 79265520 79265519 79265582 79265520 79265519 79265582 63 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .:..........::........xx...:.:..:...:.::.:::.....:..x.:....x.:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -13589145 -80641257 +3152 chr4 + 190214555 65676377 65676376 65676435 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATAT chr4 + 94230402 79265520 79265519 79265578 79265520 79265519 79265578 59 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT ............::........xx...:....:...:.::::::.....::.x.:.... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -13589143 -80641259 +3374 chr4 + 190214555 65676378 65676377 65676437 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............::........xx........:...:..:::::....:::.x.:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -13589141 -80641261 +3152 chr4 + 190214555 65676380 65676379 65676438 59 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACATATATATATATA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx.:......:......:::::..:.:::.x.:... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -13589139 -80641263 +7123 chr4 + 190214555 65696617 65696616 65696794 178 AGAACATTTTGTGATGGAACAGATGCTGTGGCAATGGTGAGTTTATATGAGGATGCTGATGACAGATGCCACATTACAGCATTAGCCAATTAAAAAAAAATTATGGGTATTACTATTTACAATTACTCAAAATGAGCTGGGCTGTGGGCAACCCCGAATGCACAGTCTCACTCTCATG chr4 + 94230402 52772838 52772837 52773008 52772838 52772837 52773008 171 AGGGCAATATGCAGTAGAACAGATGCTGCAGCAGGAGTGTGTTTACATGAAGCTGCTGACAGCAGATGCCAGCTTGTAAAATTAGCCAAT------AAAAATACCAGCATCACTGTTTACAATTACTCTGAGCAAGATGGGCTGCCAGCAAACTGGAAATCACA-TCGCACTGGCATG ..::..x.x..:::.:............::...:x:...x.....:....:.x......:::.........xx..::.:x..........------....x..:x:.:..:...:.............x:.:::..x.......:x:....x.:x...xx....-..x....xx.... 90M6D68M1D13M 121/171 70.8% 171/94230402 0.0% 7/171 4.1% 12923779 NA +3971 chr4 + 190214555 65732005 65732004 65732097 93 TTTGACAGAAT----------TCTGTACTTTATTGGTGTGTGTGTCTGTGTGTGTGTAT--ATATATACACACATATATATATACA----TATACACACATATACATAT chr4 + 94230402 85834507 85834506 85834615 85834507 85834506 85834615 109 TTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ....x......----------.:.x.xx..:...x....x.....x.............--..:..x:..:......:..x.....----...:........:...:.. 11M10I38M2I25M4I19M 75/93 80.6% 109/94230402 0.0% 16/93 17.2% -20102502 -74127900 +3135 chr4 + 190214555 65732030 65732029 65732089 60 GTGTGTGTGTCTGTGTGTGTGTATATATATACACACATATATATATACATATACACACAT chr4 + 94230402 85834556 85834555 85834615 85834556 85834555 85834615 60 GTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ........:.:x:...:x.::..:....:..x.:....:.x...::...:.......... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -20102526 -74127876 +3255 chr4 + 190214555 65732041 65732040 65732089 49 TGTGTGTGTGTATATATATACACACATATATATATACATATACACACAT chr4 + 94230402 68837096 68837095 68837144 68837096 68837095 68837144 49 TGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT ....:......:.:.:..:.....x...:...:.....:..:....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -3105055 -91125347 +3045 chr4 + 190214555 65732062 65732061 65732141 80 ACACATATATATATACATATACACACATATACATATATACATATATACACATATACACATATATACACATATATACATAT chr4 + 94230402 54005688 54005687 54005767 54005688 54005687 54005767 80 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT ........:...x..:.......:...:.:...:.:.x.x..x.:.x.xxx.::...x.x.xx....:..:....x:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 11726374 NA +3145 chr4 + 190214555 65732106 65732105 65732176 71 ATACACATATACACATATATACACATATATACATATATACACATATATATACATATATACATATATACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:........x.....::.x......::.....x.x...:::....x.:.:::.:....:::..::..:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 43131908 NA +3327 chr4 + 190214555 65732117 65732116 65732208 92 CACATATATACACATATATACATATATACACATATATATACATATATACATATATACATATATATACATATATACACACATATATATAGGTG chr4 + 94230402 22600181 22600180 22600272 22600181 22600180 22600272 92 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ....x.x..x..x:x.x.:...:....x.....::.x.:....::.....x.x...::.....x.:::.:.:..:.::...::.::..:... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 43131936 NA +3751 chr4 + 190214555 65732124 65732123 65732235 112 ATACACATATATACATATATACACATATATATACATATATACATATATACATATATATACATATATACACACATATATATAGGT---GTGTGCTTCTGTGTGTGTGTATATATAT chr4 + 94230402 76376858 76376857 76376972 76376858 76376857 76376972 115 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ..:..:.:x.x.x:.:....:..x.x...:..::..::.....x.xx...x.:.:.........:.:..:.:.x.:.x....:x---:.....:...x......:x.:.x..:.. 84M3I28M 73/112 65.2% 115/94230402 0.0% 3/112 2.7% -10644734 -83585668 +3228 chr4 + 190214555 65732147 65732146 65732235 89 CATATATATACATATATACATATATACATATATATACATATATACACACATATATATAGGTGTGTGCTTCTGTGTGTGTGTATATATAT chr4 + 94230402 89812968 89812967 89813054 89812968 89812967 89813054 87 CATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGC--GTATGTTCTTGTGTGTGTGTGTATATATGT ......x...x....:.::....x..x..::x.xx.:.:..:.:..x..x:x:..::--..:...x...x.................:. 57M2D30M 60/87 69.0% 87/94230402 0.0% 2/87 2.3% -24080821 -70149581 +3404 chr4 + 190214555 65732151 65732150 65732217 67 TATATACATATATACATATATACATATATATACATATATACACACATATATATAGGTGTGTGCTTCT chr4 + 94230402 70600711 70600710 70600777 70600711 70600710 70600777 67 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGTTTTT .:.:.:.:..x:.x...:..:..x....:...........x...:::.:.:.:.........:..:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -4868560 -89361842 +3601 chr4 + 190214555 65732184 65732183 65732244 61 ATATATACACACATATATATAGGTGTGTGCTTCTGTGTGTGTGTATATATATAACTTTCCT chr4 + 94230402 6857610 6857609 6857670 6857610 6857609 6857670 61 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTT ........::.....::.....:......:x.............x.:x.x....:...::. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 58874574 NA +3218 chr4 + 190214555 65740198 65740197 65740250 53 TTAAAAATACACACACACACACACACACAGACACACACACACACACACACTCA chr4 + 94230402 66743630 66743629 66743682 66743630 66743629 66743682 53 TTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCA ...x.....x.:...:x:....x...x...:..................x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -1003432 -93226970 +3663 chr4 + 190214555 65749298 65749297 65749376 79 GTGGTGCATGCCTGTAACCTTAGCTACTTGGGAGGCTGAGACACGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:::::.........::........x.x:.x...x.............:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -10283903 -83946499 +3085 chr4 + 190214555 65800575 65800574 65800675 101 ACATATATATGTGTGTATATATATATATATAAATACACACGTATATATATATATGTTGACACATACACTTACATATACATATATGTCTGTGTATATATTAT chr4 + 94230402 91734602 91734601 91734702 91734602 91734601 91734702 101 ATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTAT .:...x......x.x:x...:x.xx.....xx..:..:.:....xx...x.x.x..:x...x.x.:..x....x.x.......::.xx..:.....x.... 101M 67/101 66.3% 101/94230402 0.0% 0/101 0.0% -25934027 -68296375 +3071 chr4 + 190214555 65800576 65800575 65800614 39 CATATATATGTGTGTATATATATATATATAAATACACAC chr4 + 94230402 28919109 28919108 28919147 28919109 28919108 28919147 39 CATATATATGTGTGTATATATAAATATATGCATACACAC ......................x......:x........ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 36881467 NA +9980 chr4 + 190214555 65845379 65845378 65845688 310 ATTTGCATTTGAATGGTTGCCAG-------AATGTATTTTTTTTTGCTTTTGAATTCACCGCATCATGCATTCTTTTAGTCTTTTGTAAAAGAAAAATCTGCAGCAACATTGCAGAAAGCGTTGTTAATTCATTTTTTAATGAATAACGCCCTTTGGCATTCTCTTTGATAGCCATGGTTTGCTGGAATGAACAGTGTACACTTCTCTTTTTGGATTACTACAGCCCTTTTCAAGCTTGAATATGCCTTGAGGTAAAATAGAGGGTTATCCATTTGTACACAGGAGGGAAAGTACTTAGATGAATACCGAAATAGAG chr4 + 94230402 52782145 52782144 52782447 52782145 52782144 52782447 303 ATGTGCACTGAAAAGCTTGCTATGACATTTAATGTATTTATTGA-GTTCCTGAATCCAGAGCATC-------CTTTAAATTCTCTGTCAAAGGAAGCTCTACGGAGGAAATGCAGAATGCCTTGTTAATTCAGTTTTTAATGAAGAATACCCTGTGGCTTTCTCTTTGATAATCACAGTTTGCCTCCATGAGTAGGTCATACCT---TTTTTAGCTCACTATGCCCCTTAATAAGACTGCAAATGCCTCCAGGTAAAACTGAATGTTAGCCAACTCTGTAGATGAGAGGAAGAACATA---GAATACAAAAATGGAG ..x....:.x:..x.x....:.x-------.........x..xx-.:.::.....:..xx.....-------....x.:.::.:...x....:..:x...:.:.x::x.x.......x..x...........x...........x..::....x....x............::..::......:xxx....::..xx:.:..:.---.....:.x.:....::x.....xx:...x:..x.x......:x........:x..:x....x...x:.x.::.x.x...:.:...x..x..---......x:....:... 23M7I14M1D20M7D132M3D91M3D16M 206/296 69.6% 303/94230402 0.0% 21/296 7.1% 13063234 NA +3219 chr4 + 190214555 65860193 65860192 65860249 57 TGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTATTTCCACATATAGACAT chr4 + 94230402 6200763 6200762 6200819 6200763 6200762 6200819 57 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATAT .:.x.x....::.:.:.......x...:.....x.........:....:...:.:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 59659430 NA +3096 chr4 + 190214555 65889776 65889775 65889845 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -10143421 -84086981 +3149 chr4 + 190214555 65889908 65889907 65889978 71 TCCGTCTCAAAAAAAAAAAAAAAAGAAAAAAAGAAAAACAAACAAATATATAGAAAAAGTAATGAATGTTA chr4 + 94230402 58839984 58839983 58840054 58839984 58839983 58840054 71 TCCAAATTAAAGAGGAAAAAAGAAAAAAATAAGAAAAATAAGAAAAGCTATTGGAGGAGTGCTGAATGTCA ...:xx.:...:.::......:..:....x........:..:x...xx...x.:.::...:x.......:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 7049924 NA +8054 chr4 + 190214555 65893756 65893755 65894192 437 TTTTTAGGGATAGCTTATAATCTCTTGAATATGTGCATAGTAAAAAGGCTTCATTTCTGATATATGAAGATCTATGAA-TTGTTAGAGTGGATGAAAGCAAACAGTGTAGTGAATTCAACCTTTAGTCTTT-TGAACATTCTTAGTTTCTATTATCTTCTTTGG-TGGTAATTGTCATTTTGAAT---TCACTTGGGGTGATTTCACTAATTTAATTACAGAATAGGTATGTAGATAGAAAATGAGGTGAGGAAGGTGAGGAGCTAGAGCTAAGGAAATCAGAGCAGATATGTTCTACCACGTGA---------AATAGTTGATGGAGTGCTATTATTGGCACCATTTGTAACTAAAATTGAAGGTGATCGCATCCTAATGTAGTCACATGCTTGAGGTGCTTACTTAA---CCCGACAGCTAGCAAAGTGTCTGCACTATAGAAGACTTCAACA chr4 + 94230402 52787081 52787080 52787499 52787081 52787080 52787499 419 TTTCTAGAGAAGATTATTAATTTCTTGGCT--TTAAATATTAGGTAAGACTAATTTCTCACTCATGAA----TTTGAAGTTTTTGTACTGCAGAGAAGCTTGCAATCC--TTAACACCCTCTCCATTCCCTGCAAACATTTAGAACAGCTATTTTCTCTTTCAGATGACAATTTTCATTTCAAGCAGGCTACAAGAGGTCATTTAGCTAATTTA---------------TGTGGA-----GATGAGG----GAGGGCTGGTTGCACAGGCTTGAGAAATCAGGG-AGATATGT---AGCAAATAAGACTGCAAAAATAGTTGATGAAGTGCCATTGCTGTCAGCATTTGCAACTGTAGATTAAGGTGTTCACATCCTAATTTAGCCTTGTGCTCGAGGCACACCATTAACCTCCTGACAGCTAGCAAAGTGCATGCACTGTGGATCACCTGATCA ...:...:..x:::.xx....:.....:x.--x.:x...x..::x.:.x:.x......x.:x:.....----.x....-..x..:x.x..x.x::....xx:..:.x:--.x..:x.xx:..::.x..::.-::......:xx.::xx.....x...::..::.-..::....x......::.::---::..xx.:...x....x:........---------------...:..-----:......----..:..:x:.xx..xx::...x::........:.-........---.x..x:.:.---------...........:.....:...::..x..x......:....:x.:x.x......x..:.........x...:.x::....:....::.x:xx....---..:................:x......:.:..xx..:.x.x.. 30M2D36M4D6M1I29M2D21M1I32M1I20M3I26M15D6M5D7M4D33M1D8M3D9M9I95M3I43M 264/401 65.8% 419/94230402 0.0% 54/401 13.5% 13106675 NA +13424 chr4 + 190214555 65924862 65924861 65925173 312 CTTGCCTATTGTGGTTATTTTTCTTTTTAACATCTATTGGGCGGTGTGGATGAGCAACAGTACCTGCAACTGTAGAGATATTCAAATCCTCACAGCTGTCAGTAAAGCCTACACTAATGTGTCCTGAAAGAGTGATTAATAGGTTTTGACAATATCATTGCATTGCATATTTAATCAGATTATACATCTGTTAGAAATGGTTTGCTTCTAACATCTGCAGTCAAAATTCACAATCGGTATTCAGATCATTTCCTCAGCAGACACATGAAACG-ACTATGTCAGTGTTCCTGGTGACAAGTTAAAACTGCATGC chr4 + 94230402 52792288 52792287 52792588 52792288 52792287 52792588 301 CCTGCATACTCTTTATCTTTTCCTCTTTGAGATCCAATGGG--GTAACTCTGAGCAACGTTACCTGCA------GAGACAGTACAATCATCACAGCTGTCACTAAAGCCTACCTTAATGTGTCTTGAAAG--TGATTAATGGGTTTTGACAATATCAGTGCATTTCATATTTAATCAGATTATGCATTTGTTAGGAATGGTGCACTCCTAACATCTGCAGTCAGAACCAATGATCTGCATCCAGATCATCAGTTTGGCAGAAGCATGCGAAGTGGTATACAGCAGGTCTT--TCACAAGCTAAAGCTACGTGC .:...x..:.x.xxx.x....:..:...:.x...:.x....--..:xxxx........:x........------....:.x.xx....x............x..........x:.........:......--........:................x......x..................:...:......:......x::..:................:..::x.::...x.:..:........:xx:.::.....x:....x:.x.-:x...::x:xx.x..:.--.x.....:....:..:.:... 41M2D25M6D56M2D140M1I17M2D21M 225/300 75.0% 301/94230402 0.0% 13/300 4.3% 13132574 NA +3017 chr4 + 190214555 65925307 65925306 65925358 52 ATACATACACACACACATGCACACACACACACATATGTACATATATATAATT chr4 + 94230402 74526074 74526073 74526125 74526074 74526073 74526125 52 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ..x..:.............x...:.....x.:....::::......:..x.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -8600767 -85629635 +15319 chr4 + 190214555 66035496 66035495 66035832 337 AAATGAAAAGAAGAATTACACACAAACCAGTGTGGACTACTCTCTTGGGGGCAGCTAAGTCCTAAATCAATCTGAGGCTGTTCTTGAAATGCAGGCATACGTTTCCAAGCATTATATTAAAATTTCATGATCAATAACGCTGAAAGCAGCAGAACATACAAGC-AAAATAAGTGCTGACAATTCACTAGCATACGAATTTAATAAAATGTCATCCTCCAGCCTCAGCAGTAGTGCCAGGAGGAGATGACCATCTTGATTAGA----ATCTGTCAAATGAATCTCTGTTTGTCAGGTAATAATAAACTCAGGATAGTACCTTTTGTTCCAGGTTTTGTTTACT chr4 + 94230402 52815707 52815706 52816039 52815707 52815706 52816039 333 AAAGGAAAAGGAGGAT-----ACCGAACAGCAAGGACTTCTCTCTGGAGAGCAGCTAAGTTCTAAATCAATCCAATGGTGTTCTTGAAATATCAGTGAATGTTTCCAAGCATTATATTAAAATTTCATGATCAGTAGTGCTGAAAGCTGCCCTGCACACAAGCTGAAATAAGTGCTGACAATTCACTAGTATATGAATTTAATAAAATGTTGTTCACCAGTGTTAGCTGCAATGCACTGTCCGGATTATCCTCTTGATTAGAAATTACCTGTCAAAACAGTCCCTTTTTGTTAGGTGAGTGTAGATCAGAGACAGTATTGCTTGCCC----TCTTGTGTATT ...x......:..:..-----..x:.x...::x.....x......x.:.:..........:...........::.x.x............::x:.::x.:.................................:..::.........x..xxx:..:......-:........................:...:................::.:.x....:x.:...x.:.:...xxx.xxx:...x.:.x...........----.:........xx.:..:..x.....:....:.xx:..:.::x::..:....::x:...::.----.:....x..:. 16M5D142M1I98M4I61M4D11M 243/328 74.1% 333/94230402 0.0% 14/328 4.3% 13219789 NA +3726 chr4 + 190214555 66043497 66043496 66043709 213 ACTCTGTAACACTTTCTTTGGTCTCTAGTCAGCTGGCCTACCCTGCAGATTT-TAACCTTGACT---------------CTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTACACATATATATACACACACACACAAAGCTG-GCCTA------TCCTGCAGATTTTAACCTTGACTCTGTGTGTGCGTGTGTGTGTGTGTATATAT-----ATATATATATATATATATATATAAATA chr4 + 94230402 79265447 79265446 79265678 79265447 79265446 79265678 232 ACACTGTATTGCATTCTCAGGTCTTCCTTCA---------CTCTACAGATTGATAGCTGTAGCTGTCCTATTCAGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA ..x.....x::.x....:x.....::xx...---------.:..:......x-..:.:x.::..---------------.x.............::........x:...:.:....:.:.::.:.:.....:..x...x.x:..-.:.:.------::..::.x.xx.xx..:...x..:.x..x...::::x:..::.x.x.:..x:.-----::.:x.:...x....:..x...:.:.. 31M9D12M1I11M15I65M1I5M6I53M5I27M 128/204 62.7% 232/94230402 0.0% 37/204 18.1% -13221950 -81008452 +3275 chr4 + 190214555 66043559 66043558 66043628 70 TCTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT----GTACACATATATATACA--------CACACACACAAAGCTGGCCT chr4 + 94230402 85834539 85834538 85834620 85834539 85834538 85834620 82 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCT .:.....x.................:..x:...----:....:..:..x.....--------......:...x.xx...... 33M4I17M8I20M 57/70 81.4% 82/94230402 0.0% 12/70 17.1% -19790980 -74439422 +3646 chr4 + 190214555 66043620 66043619 66043799 180 AGCTGGCCTATCCTGCAGATTTTAACCTTGACTCTGTGTGTGCGTGTGTGTGTGTGTATATATATATATATATATATATATATATAAATATATATAGTGAAAGAGAAGGATCTATATATATACACATATAAATATCTGTGTGTGTGTATGGATGGATATATATA---------TATATATATATATACA chr4 + 94230402 79265498 79265497 79265668 79265498 79265497 79265668 171 AGCTGTCCTATTCAG------------TCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT-TTGTGTCCACAACACCTCTATATAAATGCACTT-----TGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACA .....x.....:.x.------------.::..xx........:...::........xx.:......:...:.::.:.::.:.:::...:....-.x...xxx:x:.x:xx........x..:...x.-----.::..x.x..x.....:::...x..x.x.:..---------:.:x.:...x...... 15M12D66M1D33M5D32M9I16M 106/162 65.4% 171/94230402 0.0% 27/162 16.7% -13221878 -81008524 +3081 chr4 + 190214555 66043652 66043651 66043715 64 TCTGTGTGTGCGTGTGTGTGTGTGTATATATATATATATATATATATATATATAAATATATATA chr4 + 94230402 85834539 85834538 85834602 85834539 85834538 85834602 64 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .:.....x..:................xx..:..x::...:....:..x...:.x:.x...::. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -19790887 -74439515 +3013 chr4 + 190214555 66043771 66043770 66043823 53 ATGGATATATATATATATATATATATACACACACACACACATATATATATATA chr4 + 94230402 61270775 61270774 61270827 61270775 61270774 61270827 53 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ...:......x.:.......:.......:...::.....x.:.:x:..:.... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 4772996 NA +3147 chr4 + 190214555 66048376 66048375 66048448 73 TAATGAGAAAACTAACAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAAGAAAGAAC chr4 + 94230402 85790941 85790940 85791013 85790941 85790940 85791013 73 TGAAGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAAC .:.x.....:....:xxx....:..:.....:.........:.:.:.::.:.::::x...:...::.x..... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -19742565 -74487837 +3141 chr4 + 190214555 66048378 66048377 66048454 77 ATGAGAAAACTAACAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAAGAAAGAACCCCAAA chr4 + 94230402 69582220 69582219 69582296 69582220 69582219 69582296 77 ATGAAAATATTCAGAATGAAAAAAAAGAAAGAAAAAAAATGACAAAAATGACAACGAAAAGAGGAGAGAACCATGAA ....:..x.:.x.x..x:........:..::...:....x:.x.:...x..x..x:...:..:..:......x::.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -3533842 -90696560 +3141 chr4 + 190214555 66048388 66048387 66048484 97 TAACAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAAGAAAGAACCCCAAA---CACAGTAATTTGTATACAT----GATATTTTCTT chr4 + 94230402 44508577 44508576 44508680 44508577 44508576 44508680 104 TAACAAACAAAGAAAAAAAGACATGAGGAGAGGAGAAGGAAAAAAAAAAGGATTCAAATAACCTATATGTCTCATTGTATTGCACGCACTCAGAATATTTTCTT .......x...:.........x.x..::...::....:::....:.......xxx..:x.x..:.x.---.x..x.:xx...:.::..:----:.......... 67M3I19M4I11M 67/97 69.1% 104/94230402 0.0% 7/97 7.2% 21539811 NA +9792 chr4 + 190214555 66059149 66059148 66059366 218 GGATAGATTTCTGCAACTGTATTGCTATTCTTAACATGTTCCAGCTCCATCACAATCAATCCATTCTTGGTTGACTCCTCATTCTTTTAG-CAATTAACACAATTTATCAGGTTATGAATATGCAACAAAAATAACCCTTGACAGA-----TTTTTCTTCATCCTGGTTATGAAACCAGGCTTCA----TTTTTCCATATGGCATTCCAACTGCTGGCACAATTGTTT chr4 + 94230402 52824390 52824389 52824613 52824390 52824389 52824613 224 GAATGGATTTTTGAAACATTATTGTTATTCTTAAGGTGTGCATACTC-AGCACAACACATTCATTCTTGGTTGCCTCTTCATTCTTTTAGCCAATTACAGCAATTTATTAGTGTATGAATATGCAAC-AAAGTAACCCTCCAAAGATTTTTTTTTTCTCCATCCTGATTATGAATGTAGTCTGCAATTTTTTTTCCACATGCCTTCCCAGCTGCTGGTGCA--TGTTT .:..:.....:..x...xx.....:.........x:...x.xx:...-.x.....:xx..:............x...:............-......xx:........:..xx..............-...:.......:x.x...-----.......:.......:.......xx:..x..x..----........:...x.x.:...:.......::..--..... 47M1D42M1I36M1D18M5I34M4I32M2D5M 170/214 79.4% 224/94230402 0.0% 14/214 6.5% 13234759 NA +15069 chr4 + 190214555 66061810 66061809 66062561 752 GAAACTCAGCATAGTTCCAATAAAGAGAGAAAATACCCTATCATCTCAACAAAAACGTGGATTACATTACA-ACACGTTTTTTACCAAAGGGGACAATTTTTCATTACTTAACACTAAAGTGCTGAAACCATTAGTGTACCCTTTTAGACTTAAAATAAACATGTGTATTATGTGCCTATATCTCCCAATGGAGATCACAAATGGTGTCACATTGCACTGTGGATCCATTAGTAACATAATGGCATCCAACCACAGGATTTGCTAATGGTTTAAATTGGAAAGCAGATTTTTATTTTCTTCAGTTCAAAAGAGAGAGAGAGAGAGAAAAAGGAAAATAGTAAGAAATGAAAGGAAAGGAAGAAGAAAGAAAATCTTCCCCTCTTGTTCCTTTTACGTCCATAGTCAGCTTAAAATTTTGTTTCTGTTGAGTAA---TTCAGGATATGACACTTTAAGAAAAAATGAATGAATCAGAAGACCCAGTATTTTAAACCGTTGTCTAGCATATAAAATTTAATAAAGGTTAGAGCCCATGTAAAATCATTTAACAAAATGTTTTTTTCTGATTAGACAAAGGAGAACTGTAACATTTTAAAACTGGGGCATGTGA--CCTAATTTTGGATAGATGTCTCAGGACATGCAAAAGCCTGTTTTTATAAATCATGT---ACAGAAAAAGCTAATTGGCTTCTCAGTG--ACTTACAATATCATCCTTATAGCAAAATTGCTG-TAATTACTAGAAGGAAAAGGGGAGGTGG chr4 + 94230402 52827695 52827694 52828356 52827695 52827694 52828356 662 GAATTTCATCGTACCTCTGATTGAGGAAAGAAAGACCA-ATTAACTCGG-GAAAACATGGATTGCATTACATATGCATTCACTGCCAAAGGGGGAGAATGTCGATTACTTAACACAAAAGTGCTGAAGCCATTAGTACAGCCTTTTAGAGTTGAAATAAACATGTGTATTATATGCCTGTAAATCCCGGTGGACAGCACAACTGGTGTCATATTCCACAGTGGATCCATTAGCAATATAATGTCATCTAACCACAGGCCATGCTAATGGTTTAAATTAGAATGT--GTGGGTATTTTTTTAATTT--------------------ATAAATGACACTGCTGTGCGATTAAAATAAA----------------------CCTCT--------------------TCAGCATAGAACTGCTTCTCTTTTATGAAAGCCCTTGTGATGCATCACTTCAAG-CGATATCAGTGAATGGGAAG-----GTGT----------------GAATGCAAGAACTA--AGAGTTCAG---CCAAATAAAATGCATTCATGTGGTGCTTGAT----AGCACAGAAAGAGGGAATGGAATGTCTTAAAA----AGCAACTGAATTCCAGTTTTGGGCAGGTAACAGAGTACATACAATACTATATCTGTACAAA-CTTGTTTCATAGCTGAAAATAATTGGCTCTTCCATACTACCAGCAACAATGCCCCACTGGCAATAGTAATGCTAATTGCTATGAGTAGAGAAAGAAGTAG ...x:...x.:..x:..::..x:..::.::...x...x-..:.x...::-:.....:......:.......-.::.:..:x:.:.........:x:.x.x.:x............x...........:........::.x.........x..:...................:.....:..xx....::....x.x.....x........:...x...x.............:..:......x....:.........x:x.................:...x.:--:.xxx......:..x.x..--------------------.x...x..x.x.:x.:x.x:..x...:x...----------------------.....--------------------.....x..:..:.x:x.:...x..:x.x..---:.::x...:::x.....:...-x:.x..x.:.....x:....-----..:.----------------.x..::..:.x:..--.:..x.:..---...x:......xxx..x.::x::..:..xx.----.x:.x.x....::.:.x..x..::.:......----:...xx...--:.:.:......::..:.:x.xx..x....:...x.x:x.:.:.x..:...-.x...---.:..xx:..:x.........::..x:.:--..:x:...:.x:::..:xx.:....x.x.:x..-.....:...x:..x.:.::::..:..:. 38M1D10M1D21M1I212M2D19M20D31M22D5M20D30M3I21M1D20M5D4M16D14M2D9M3D31M4D32M4D9M2I50M1D5M3I28M2I33M1I28M 439/650 67.5% 662/94230402 0.0% 114/650 17.5% 13234115 NA +3296 chr4 + 190214555 66071968 66071967 66072027 60 TCCTCCTATGTAGATGCC------GTTTTTTGTTTGTTTGTTTGTTTTGTTTCTATTGCCTGATTT chr4 + 94230402 15612096 15612095 15612161 15612096 15612095 15612161 66 TCTTCCTTTACAGATGTTCGGAGGGTTTTTTGTTTGTTTGTTTGTTTTGTTATTTTTTCCTAATTT ..:....x.::.....::------...........................x:.x..x...:.... 18M6I42M 49/60 81.7% 66/94230402 0.0% 6/60 10.0% 50459872 NA +3278 chr4 + 190214555 66092242 66092241 66092359 118 AAACAGAACTAATGTATATATATATATACATTATATATATATATAATGTGTATATGTGTATATATATATATATATATATATATATATATATATATATAAATTTGGATTGTGCTTATCT chr4 + 94230402 74976138 74976137 74976246 74976138 74976137 74976246 109 aaataatattCAAGTGTATACATGTTTACAGTCC---------TATGGTGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGTACTGTTTTTATTT ...:.:x.:.x.x..:....:..:.x....x.x:---------..xx.....x....x.:.:.......:....x...x...x.:.x....:xx.:.:x.....x.:...x:....:. 34M9D75M 73/109 67.0% 109/94230402 0.0% 9/109 8.3% -8883896 -85346506 +3286 chr4 + 190214555 66092250 66092249 66092309 60 CTAATGTATATATATATATACATTATATATATATATAATGTGTATATGTGTATATATATA chr4 + 94230402 93711960 93711959 93712019 93711960 93711959 93712019 60 CCATTATATATATATGCTTACACCATGTGTATATATAATGTGTGTGTGTGTGTGTGTTTA .:.x.:.........::x....::..:.:..............:.:.....:.:.:.x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -27619710 -66610692 +3520 chr4 + 190214555 66092250 66092249 66092341 92 CTAATGTA-TATATATATATACATTATATATATATATAATGTGTATATGTGTATATATATATATATATATATATATATATATATATATATAAA chr4 + 94230402 6083136 6083135 6083227 6083136 6083135 6083227 92 CTGATGTAGTGTTGATATATGC-TTCTCCCTATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAA ..:.....-.:.xx......:.-..x.x:x.......::.....:.:....:::...:.:.x.:..............x:x..:..:..x... 8M1I13M1D70M 65/91 71.4% 92/94230402 0.0% 2/91 2.2% 60009114 NA +3553 chr4 + 190214555 66093042 66093041 66093131 90 TATGTACATATATATGTGTGTGTACATGTGTGTGTATATATATGTGTGTATATATATGGAGAGAAAGGAGAGATGGATTGAGACAAAGAT chr4 + 94230402 86633930 86633929 86634019 86633930 86633929 86634019 90 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAAGATGAAGATGGTCTTAGAGAAAAAT .::..:.:..x:...:...x....:.::..:....:......::.x.....::..x..x.x:...::x::......x:.x...x...:.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -20540888 -73689514 +3187 chr4 + 190214555 66093044 66093043 66093112 69 TGTACATATATATGTGTGTGTACATGTGTGTGTATATATATGTGTGTATATATATGGAGAGAAAGGAGA chr4 + 94230402 86633934 86633933 86634002 86633934 86633933 86634002 69 TGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAAGATGAAGA ..:::.x:.......x...:......:...........:..x...:.::..x.:.:x:..::.x.:... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -20540890 -73689512 +6704 chr4 + 190214555 66096706 66096705 66096899 194 TGCATCCAGGAATTAGGTTCAGG---TAATAGCCTGCTGACACCTAAGGTAAAATT--CAGTCATTGTGTATGCATGTCAAAATCTATTAAAGCAATTGAATGAAGAGCTTACACTACAAAGCTTAATTAAACACATAGATTTTCACCTAGCTTATTTT--AAAAGTATGACTTTATCTAAATGATGGAAAAAGAGTTTCC chr4 + 94230402 52837268 52837267 52837468 52837268 52837267 52837468 201 TGTATCTAGTAATCTGGTTCAGAAGTTAGCAACCTGATGATACACAAAGTAAAACCAGCAGAGAGTGTACTTCCATGTCTAAGTGCGTTAAAGTGAAAGAACAGAAGGCTTACAGCCTAAAGCTTAATTAAACAAGTGGATTTTCATCTAATATACTTCTGAGAAGAACTGCTGTGTGTAAATGATAATAAGAGACTTCCC ..:...:..x...:x.......:---..::.:....x...:..x:..:......::--...xx.x...::x.x......x..:.x::......::.xx...:::.::.......x:x:................x:.:........:...::x..:..:--.:...x.:x:..x.:.x........::x..:...x..:.. 23M3I30M2I101M2I40M 130/194 67.0% 201/94230402 0.0% 7/194 3.6% 13259438 NA +6023 chr4 + 190214555 66107514 66107513 66107692 179 AGAGAAAGTGTAAGTTTGTTTCCAAATCAGGCATC------------AGGGTGATATTAAGTATGAC-TGGAATCTCACTAGGCAGATGTGCAGTCACTGTAAATGCTGATAGTGTTCCTGTTTAGTACAGAACGTTTATAATTTTTCATGTAATCAATGACAACCTGTGACAGATTTCTTCCAAATAAAGG chr4 + 94230402 52840599 52840598 52840788 52840599 52840598 52840788 190 AGGGGAAGGGGAAACTTCCATCTAAGTCACAAATCTCTTGCCTAGCAATGGGGATGTTATACAGGACGTAGCAATTTGCTATGCACATGTACACTTGCTGTGAGCCCTGACAGTGTTTCTGTTTGGTACAGTGCG--CATAACTTCTTATATGATGGGTGACAATCTGTGACAAATCCTTTCTGAGTAAAGG ..:.:...x.x..::..x:x..:..:...x:x...------------.x..x...:...x::.x...-.:.x.x:.::...x...x....:..x.::....:.::x....:......:......:......x:..--:....:..:.:..:.:..x::......:........:..:::...::.:...... 35M12I20M1I67M2D55M 118/177 66.7% 190/94230402 0.0% 15/177 8.5% 13266915 NA +22175 chr4 + 190214555 66123864 66123863 66124488 625 AAGAAAAATAGAAGGTCATCTTTGGGTCACTGCTATTCAGTTTGCTGTGCCAAGCTGAAAACCAAGGCCATTAAATATGAAAATCCACTCATTGTCTCAGGCTTGATTGTATCCTGTCTTTCAGATCAGACTCACCATAGTCATAGCAACCCTAATAGGCGGATGTGCAT----------------TGGACCACATCATTTGCAGGGTGTCTTTAACTGAGAAAAGTTTTGTTGAAAATATGTGTGATTAATGCCTTCAACTATTATCTCTCATTGAACAGACATGAAAGGGGGCTACTTTGTGAGCCCAGATAAGCCTATTGCATGGCCATTAATGGCATATTCAGCCCTTGCTGAATTAATCTATTATTGCC-TCTTGTCTTTGGTAACCATAACATGTTGTTGGAAGGCTGTGCAAAATTTGA--GTAACTGAACCACAGCTCCAGTAATCCTTTAGACCTGGGTGTAAGAGAAGAGTGAAAAGCTGTTTAGTGACTAATTGAGTGTGCTGTGCTGTT-TCATTAGTATT-AAGCAGTGGTTCTTTATTTTAATCTGTTTATATCAGAGTGATATATCACCTTAACATCATCAGTTACTCAGCAAGC-TTCA--CACAG---------------TTCCTCTATCCATAAATATAACTAAAA chr4 + 94230402 52842571 52842570 52843214 52842571 52842570 52843214 644 AGGAAAAATAAGAA-TCAAGAGAGGATCATTGCCACTGAATT-GCTGTGCCAGGCTGAAAGACCACCCCATTAAATGTGAAAATCTACTCATTGTTTAAGTTCTGATTGTATCTT-TCTTTCGGAGCAAGGACAGCAAAGCCATAGCAACGTAAATAGGTAGATGTGCATGATGTGCCAAATGATGTAGACCACATCCTTTGCATGGTGTCTTTAACTGAGGAAAAAATTGTTGAAAATACATG--ATTAATGCCTTCAACTATTATCTCTAATTGAACAGACATGAGAAAGGCTCACTTTGTGAGCCCAGATAAGCCTATTGCACAGCTGTTGGGAGAGTATTGAGACCTGGCTGAACGAAGCTGTTATTTCCATTTTTTGTTTCGTAAGTATAGCATGTTATTGAAA--CCTAGCAAAAATGAATGATTGCTGAAATGTCGTTCTTGTAATCTGCTAAGTACTGGTGTCTAAGAAGACAGAAAGACTGTTTAACAAACA--------TGCCCTCACATTGTCATTAGTATTAAAATAATGG-----GACTTTAATATATTTAGATCATAATAATCTATCAGCTGAATATCAAGTGCTCGGCATTAAGTGTTCAACCACAGTGTTACCTCTTTAGCTTCATTTATCAATAAGCTTAACAGAAA .:........::.:-...xxxxx..:...:...:.:.x.:..-.........:.......:x.x.xx.........:........:.........:.x..x::..........:.-......:..x..::xx..x..x..:.........x:x......::.........----------------.:.........x......x................:...:xx............::..--.........................x...............:.::..x::.............................::..::..::x:.x:....x..x...x......:x..x..:.....x..-.:..x.x...x....x:...:......:...:..--.:xx......x.x:.--:.x:.....x:::x.:..:x......:x:..:::x:x.....xx:......xx....::.......:::.x:.--------...:x.xx::..-...........-..::.:...-----x.:......x.:....x....x.:.:..x.....x..x..:....xxx.:.xxx..x:...:-....--.....---------------...x.:....x....::x....x:... 14M1D27M1D72M1D54M16I58M2D128M1I34M2D15M2I73M8D12M1I11M1I9M5D62M1I4M2I5M15I27M 442/605 73.1% 644/94230402 0.0% 59/605 9.8% 13281293 NA +3482 chr4 + 190214555 66171574 66171573 66171656 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -9861623 -84368779 +3164 chr4 + 190214555 66173028 66173027 66173087 60 TATACATGTACATAAATACTTATACACAAATACATATATATGTGTATGTATATATATGTA chr4 + 94230402 66642211 66642210 66642270 66642211 66642210 66642270 60 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA .....:.:..:.:x....:.:......x...::.........x:....:.:...:..::. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -469183 -93761219 +3268 chr4 + 190214555 66173056 66173055 66173118 63 AATACATATATATGTGTATGTATATATATGTATACATATGTGTGTATATATGTATGTATACAT chr4 + 94230402 86633922 86633921 86633984 86633922 86633921 86633984 63 AATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCAT ...:x:::.:::..:...x......:.x.........::...........::.x.....:... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -20460866 -73769536 +3081 chr4 + 190214555 66173066 66173065 66173128 63 TATGTGTATGTATATATATGTATACATATGTGTGTATATATGTATGTATACATACACACAAAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC .:...:....:...:.:...x..xx:.x.:...::..:.....:....:...:....:..x.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 19037889 NA +14308 chr4 + 190214555 66179023 66179022 66179323 301 ATAAATAGAACT------------AAGTGGGAGAGGAAGAT---------TGCTCCCATCCACTCAAAA-GTGTATGCCTGCCAGAACCATTTAGTGGAGCTGCTGAACAGCTTTGTTAAGGTGTTTATCCCCTAGACACAGTTCTGAGCTGTGGGCATTCAGTGGTATAGAAAGGAATTTCAGAGTATGCCAAGCACACAAGAGGAGGTTTTCTAGGCAGACACAGTGTTGTGACTCATCTGCATAATCCCTTCACCCTGTTCAAGGAGGAAGGAGGAC------ACCATGAATTCTGAGGATGTCAGTCCTGACAGCTTTATTACAA chr4 + 94230402 52859389 52859388 52859713 52859389 52859388 52859713 325 ATAAATAAAACTTCAAAGGTTTGAGAGTGAGGGAAGAGGATGAGAGCGCATTCTACCATCCACTAGAAATGTTTTTGCCTGCCAGAACCGTTTAGTGAATCTGCTAAACAGCTTTGTTAAGGTGTTTATCCCACCAAGACAGTTCATAGCTGTGGGCATTCAGGGGTATAGAAATGAA-TTCAGGCTATGCCAAGCATACAGGACAATTTTTCTGGGCCAGACACAATACAGCGGCTCATCTGCATAATCCCTCCATCCTGCTTGA-GATGGAGAAGAACTGAAAAGCAGTAGATACT--ATATGTCAGCCCTGACAGCTTTATTAAAA .......:....------------:....:.:..:..:...---------.x..x.........x:...-..x.x..............:.......:.x.....:..........................x:x:.x.......xx................x..........x...-.....:x...........:...:..x:.xx...::x:.x........:.::x.:.:..................:..:....:.::.-..x.:..:..:..------:.x:.::..x..--:x.......:................x.. 12M12I17M9I19M1I108M1D87M1D13M6I12M2D29M 234/297 78.8% 325/94230402 0.0% 32/297 10.8% 13319634 NA +3095 chr4 + 190214555 66182225 66182224 66182269 45 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGTGTG chr4 + 94230402 79265519 79265518 79265563 79265519 79265518 79265563 45 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTG .............::........xx...:...:...:..:..... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -13083294 -81147108 +3119 chr4 + 190214555 66199388 66199387 66199448 61 TTTCTTCTTCATTCCTTCCTTTTTTCCTTCATTTTTTCTCCCTTCCTTCTTTCATCCTTTC chr4 + 94230402 57538450 57538449 57538510 57538450 57538449 57538510 61 TTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ...........:...:.....::.:.:x.:.....:...:....:x...::..x::.:.:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 8660938 NA +3533 chr4 + 190214555 66199390 66199389 66199578 189 TCTTCTTCATTCCTTCCTTTTTTCCTTCATTTTTTCTCCCTTCCTTCTTTCATCCTTTCCTTTCTTCCTCCATCCCTCTTGCTCTTTTTCTTTATTCTTCTTTTTTCTTTCCTTCCTTCCTTCCTTTTTTCC--TCTCTCCCTTCTTTGTTCCCTCTTCCTTCCTTGCCTCCCTTTTTCCTTTCCTCCTTT chr4 + 94230402 26457966 26457965 26458134 26457966 26457965 26458134 169 TCTACTGTTTCCCATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATT----------------------CTCCTGCCCTGTTTCTCATTTCCTCTTTCATTCACCCTTTTCTCAATCCATGTGACCAATCTAGCCCAGATCAAATCACTCTGCCATCTTGACGTCTCCTTTTACCTAACTTGTTT ...x..x:x.:..x.:.............x..::.:.:.......x....xx.----------------------...:...:..x.....:xx...:.....:x.::x:....:::..xx...x.x.xx..--...xx...xxx.:x:x..x....x..x..:.x:.x..:.:....x.:.xx..:x... 53M22D57M2I57M 106/167 63.5% 169/94230402 0.0% 24/167 14.4% 39741424 NA +3027 chr4 + 190214555 66199476 66199475 66199537 62 TTTCTTTATTCTTCTTTTTTCTTTCCTTCCTTCCTTCCTTTTTTCCTCTCTCCCTTCTTTGT chr4 + 94230402 18373061 18373060 18373122 18373061 18373060 18373122 62 TTTATACATTCCTTTTCTCTTTATTCTTTTCTCCTTCCTTCTTACCTCTCTGCCTTTTGTGT ...x.x:....:.:..:.:.:.x.:...:::.........:..x.......x....:.x... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 47826415 NA +3364 chr4 + 190214555 66199489 66199488 66199591 103 CTTTTTTCTTTCCTTCCTTCCTTCCTTTTTTCCTCTCTCCCTTCTTTGTTCCCTCTTCCTTCCTTGCCTCCCTTTTTCCTTTCCTCCTTTTCTTCTCTCCTTC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCC-------ACACCCATTTCC--CCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ....x:.:.....:::..:.:.....:...:....:....-------::x...x:....--......:..:..x::.::.:..x.:...x..x..:..:..:. 40M7D12M2D42M 63/94 67.0% 94/94230402 0.0% 9/94 9.6% 12434954 NA +9164 chr4 + 190214555 66204535 66204534 66204914 380 ATTTTAAGGATGAAAAGA---AATGAAACCTAATCTCTGATAATTTTAAAAATAGATA--AACATCACTGGACTTCAAATTCACTTCCCTCTTCACAAAAGAAATGGA---CTCTACACACTAGTGACTCTGCCAAGGTTTTAACATTCAGTAATATCCCACCAGCGTACACTAAAGAAAATGGAAAGCAAATACCATGCCAAGATTAGACGTTTGCAGTTCTGTCTGCTTTTCCAACTCTCATCACACTCAGACACCAGGGACTGAAACAACATCATTTTAAACTTAAAAGTAAAGTTTGTCATGTGAAAATTGCAGATGAAATAAATCCTAGCTAAGCATGCCCTTTTCTCTTAGGGAAAAAAAAAAGTAAACTGGATTATAAGGA chr4 + 94230402 52864252 52864251 52864615 52864252 52864251 52864615 364 ACTTCAGAGACCAAAAGATCCAAAGAAATCCACTCCCAAATTAATTTAAAGATAAAAAGGAAAAACTCCTGGCCAAACAATAATTAGGC------AAAAGGAGGTAGAAATCTCT-TACAGAATTGGTTCTGCCAGAATTATAATACTT-GTAATGTCCCACTAGTGGCCAGTAAGGGAAATGGAAAGTGAAAGTCATGCCAAGATTACACATTCACAGCTCTGCCTACTT----GCTTCTCAGTGCCCAGAAGCATGAAGGCCTGAAACAACGTCATTTTTAACATTAAACTAAATCTTGTCATGTGAAAGTATAAGATGAGCCAAAT-----ATAAATATTGCCCTTCTGCTACGG-------AAAAGGAGGTTGGATTCTGAAAA .:..:.::..:x......---..x....:.:.x..:.x:..x.x......:...:.x.--..x.x.x.:x.:.:xx.x.x.x.:.xxx.------x...:..::.:..---....-:...xx.x..::.......:::..x...:.:.:-.....:......:..:.xx..x...:.:..........::..x::.............x..:..::...:....:..:...----:x:.....x::.x.xx.::..:x.:..x..........:.......x...x.x...x....x:.............:.xxx......:x:....-----x...::..xx..:..::x..xx..-------.....x.:::......x.:.::. 18M3I37M2I29M6D13M3I4M1D33M1D81M4D94M5D24M7D23M 236/356 66.3% 364/94230402 0.0% 32/356 9.0% 13340283 NA +3121 chr4 + 190214555 66211213 66211212 66211249 37 GCAAAAAACAAAACAAACAAACAAAAAAAAACCCACC chr4 + 94230402 57136545 57136544 57136581 57136545 57136544 57136581 37 GTAAAAAACAAAACAAACAAACAAAAAAAAAACCACC .:.............................x..... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 9074668 NA +3258 chr4 + 190214555 66218616 66218615 66218703 88 GGTTTTCTTTTTCTTTTTTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTT----TCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 34734817 34734816 34734908 34734817 34734816 34734908 92 GATTTTCCTTCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTT .:.....:..:...:.:.:.....xx....:...:.:...xx:.x.:..----x:x.....:..:..x......:..:.::.x.....x... 49M4I39M 60/88 68.2% 92/94230402 0.0% 4/88 4.5% 31483799 NA +7519 chr4 + 190214555 66218620 66218619 66218743 124 TTCTTTTTCTTTTTTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCT---TTTTCTTTCTTTC-TTTCTCTCTCTCTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 27163708 27163707 27163835 27163708 27163707 27163835 128 TCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCctttctttctttctttctttcttttctttctttcttttctttctttctttctttctttctttctttctttcttt .:......x.............x..:..xx:..........:...:...::.:.:.:.:.:.:.........---.............-.....:...:.................:...:...:... 72M3I13M1I39M 102/124 82.3% 128/94230402 0.0% 4/124 3.2% 39054912 NA +3046 chr4 + 190214555 66218628 66218627 66218727 100 CTTTTTTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTT chr4 + 94230402 38131849 38131848 38131948 38131849 38131848 38131948 100 CTTGACTCATTAATTTCCTTTTGAATTCTCTTGACTTTTTTCCCCCCTCTTGCTTTTCCTTTTTTTTCTTCCTGCTTTTTGACTCTCTATTCCTTCTGTT ...xx:..x..xx...:.....xxx.:..::.xx....:..::::.:....x.....:....:....::.:::x:.:...xx......x..:...::x.. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 28086779 NA +3359 chr4 + 190214555 66218632 66218631 66218703 72 TTTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ...........x...........:..:..:.::.::.x:.:.:x..:...x..x:..::.:.x...x..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -2944715 -91285687 +3011 chr4 + 190214555 66218652 66218651 66218731 80 TTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTT chr4 + 94230402 66421008 66421007 66421087 66421008 66421007 66421087 80 TTCCTGGCATATTTCTAAATTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTCCTGGTTT .....xx:x.x.....xxx..:...:.......:....:.x......::...x....:x...::.::.:.:..:.xx... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -202356 -94028046 +3517 chr4 + 190214555 66218663 66218662 66218761 99 TTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCT----CTTTCTTTCTTTCTTTTTTTTTTTTTTTTGATGGAGTTTTGCTCTG chr4 + 94230402 61949704 61949703 61949806 61949704 61949703 61949806 103 TTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTG .......xxx..::x:.x:.x.x..:::..:x.x:.:.x.:...x:...:..:----...::...........:............::....x....:..:.. 53M4I46M 66/99 66.7% 103/94230402 0.0% 4/99 4.0% 4268959 NA +3239 chr4 + 190214555 66225653 66225652 66225706 54 GGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAAGGAGGCAAGGAACAAG chr4 + 94230402 16453596 16453595 16453649 16453596 16453595 16453649 54 GGTATGTAGGGGGGGGGGGGGGGGAGGAAAGGAGGGGAGAATGCGAGGAATAAG ..x.x.x.:...:...:...:........:......:..:.x..:.....:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 49772057 NA +9630 chr4 + 190214555 66242067 66242066 66242328 262 AATCACATGAAATTTGGATATAAAAGATTCTTCAAGTGTGTGTGCATCTGTTTGCTATTCAAAAAAAGGCACTCTGAGGAGTACAATTTTCCATAGGCCATCAGGCATAAAATGCAAGAAATCTTCTGAATTATTGATATGTCAGAGGCATACAATAGTAGCTTACATGATGTGTTTTGTTCCTTTTACTCTGATGTATCAGATTTTGTTTTAATACACTCATAATC--------TAAGAAGCA----TTTTGCAATATAATAAATATTTATTT chr4 + 94230402 52872751 52872750 52873020 52872751 52872750 52873020 270 AACCGCTTGAAATTTGGAGACAGGA-ATTCTTCAAAAGCCCCTGCATCTGTTCTCAGTCCAAGCAA--GCACTCTCAAGAGGCCAACTTCCCATAGGCCATCATGCATAATGTGGATGAAACCTCTTGAATTATTGATCTTGCAGAAGCATATAATTGTAGCTTACACAGTGTG-TTTACTCTCAGCGCTTTGATTTATCAGTTCTTATAATAATGTTCTCACTTTTGGTGCTCGTAAAATGCAACTGGCTTGTAGTTTAATAAATATTGACTT ..:.:.x...........x.:.::.-.........:x.:x:x..........:x.x:.:...:x..--.......x.:...xx...:..:.............x......x:..x.x....:..::............x.xx....:.....:...x..........:::....-...::..::xx::..:....x......x.:..:.xx....::x....:xx.:--------...:.x...----x:...:.:.x...........x.:.. 25M1D40M2D106M1D52M8I9M4I26M 184/258 71.3% 270/94230402 0.0% 16/258 6.2% 13369316 NA +3044 chr4 + 190214555 66243403 66243402 66243460 58 AATAATAATCAGTAAACATGTTTTATTTATGTGTTATACTTGATTGTCAACACAATAA chr4 + 94230402 58310517 58310516 58310574 58310517 58310516 58310574 58 AATAACATTCAGTGAACATGTTTTATTTATTTTTTTTAGTTAATGATCAAAATAAGAA .....:.x.....:................x.x..x..x..:..x:....x.:..x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 7932886 NA +3076 chr4 + 190214555 66262470 66262469 66262524 55 GGTTCTGGTGGTTGCTTTATTTATTTGTATTTTGTTTTTTTTTTCTGGTTCTTTT chr4 + 94230402 52669390 52669389 52669444 52669390 52669389 52669444 55 GATTTTGGTGGTTATTTTTGCTGTTGGCATTTTGTTTTTTGTTTTTGTTTCTTTT .:..:........::...xx:.:..x.:............x...:..x....... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 13593080 NA +15547 chr4 + 190214555 66274542 66274541 66274851 310 AAATGCACTTCATGGAATTGTTCGTCCTTACTCAAATTCAATTCCAGTTATGACCCTGAGAGATGATTAGTAAATTCAACTTTTTAATTAGCATTTTGCATAATTCATTGAAATTATAATGCACTCATGCATTTGATTGTCAAGGTGCAGATGTGCTAATATGAGGCTATAATTTTCTCATCTAAATAACACTTTTAGTAAAACCTCCAA-TTTCTCACAATTCTATTATATAAGACCTATTATTGC-----TCATTTTTAAAAAATGAGTTCAGTTGGATTT-----TGAAGTCAGCTTGTATTGTTACAATGGATTGCT chr4 + 94230402 52876198 52876197 52876516 52876198 52876197 52876516 319 AAATTCACTCTGCAGAATTGTATGTCCTTAATAAAATTCAGCTCTAGTTATGACCCTGTGAGATGATTAGTGAATTAGGCTTCTTAATTAGCATTTTGCATAATTCATGGCAATTACAGCGTTCTCATGGATATGATTGTCAAGGTGCAGATGTGCAAACGTGCAGCTATAATTTTCTCATCTAAATAACTCTTTTGGTGAAACATCTAATTTTTTTACAACTCTATTGTGCCAGGGCCATTATTCCTGTTGTTATTTTTAAGGCATTAG--AAAATGGATGTGAATATCACTTCAGCTTCAATCGTTGCAACCAACTGTT ....x....:::::.......x:.......x.x.......::..:.............x............:....x::...:.........................x.x.....:.::.:x......x..x.......................x..::..x:.........................x.....:..:....x..:..-...:.:....:......:.::x..:x.:......x.-----.:........::x..x..--x.:x.....x.-----.x.xx.......xx..:...:...:x:.:..:. 210M1I36M5I18M2D11M5I33M 238/308 77.3% 319/94230402 0.0% 13/308 4.2% 13398344 NA +3271 chr4 + 190214555 66297817 66297816 66297916 100 TATTATAATCAGGATGTTTATCATACATAATTACTGAGCAAGAGCTGTATTATATGGTGCTGACAAGCATGGATCTGTAACTCCAGATTTATGTCATTTT chr4 + 94230402 52883064 52883063 52883147 52883064 52883063 52883147 84 TATTGTGGTCAGGATGTTTATTAGATGCGGTTACTGAGCAGGAGTTGTGTTTTCTGTTCC-------------ACGGTAA---CAGATTTATGTTCTTTT ....:.::.............:.x.:::::..........:...:...:..x.x..x.x.-------------x.x....---...........:x.... 60M13D7M3D17M 63/84 75.0% 84/94230402 0.0% 16/84 19.0% 13414753 NA +3255 chr4 + 190214555 66300645 66300644 66300707 63 TCCCTCCCCTCCCCTCCCCTCCCCTCCCTTCCACTTCCCCTCCCCTCTCCTCCCTTCCCCTCT chr4 + 94230402 86523033 86523032 86523094 86523033 86523032 86523094 62 TCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCC-AACCCCCCTTCCACTCT .....:::.....:::..x..........:..x:...:.......-xx..:.......x.... 45M1D17M 47/62 75.8% 62/94230402 0.0% 1/62 1.6% -20222388 -74008014 +3040 chr4 + 190214555 66312212 66312211 66312267 56 CTCTAAAAAAAAAAAAAAAAAGAAAGAGAGAGAGAGACCCAAGCAGAACCAATGGC chr4 + 94230402 66158975 66158974 66159030 66158975 66158974 66159030 56 CTCCAAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAGGC ...:...::.......:......:..........::.x:x.:......x:.:x... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 153237 NA +8629 chr4 + 190214555 66340836 66340835 66341072 237 GGAGTTTCATTTGTTATTCCCTTCTTTTCCTTCA--TTGCAAAGTACACCTCTTAGTATTCCCAAAGAGACCC-AAGATTTGCATATAAATCTAATTGTGTGTATTCATGCAAAACTTTTCAATTCATCACAAACTATCCATAGATACTAAAATTAATTTGTGAGTGAA--GAGTCATTGTGTTCAGACATAGAAAGTGTCAAGCTTTCTGCTCTTCCTT---------ACTTTCCTGCTACTTAGCTGTC chr4 + 94230402 52890779 52890778 52891028 52890779 52890778 52891028 250 GGAGTTTTTTTCTTTTCCTCTTCCTTGTCTCACAAGCTGTAAAGAATGCCTCTTAGTATTCTCAGGGGAGCAGGAACATTTGCATATTAATTTAATTGTGTGTGTTCATGCAAAACTACTCAACTCACAGCAAACTAGCCACAGTTATTAAAATTAATTTGCAAAGGAAGGGAGCTATTGTTTTC-GAGAGTGGGGCTGTCAAAGCTTGTGTTTTTCCGTGTGCTGAGCACCTTCCTATTTGTTTACTGCC .......:x..:x..x:::.:.:...x..::x..--:..:....x.::.............:..::.:::.xx-..x..........x...:...........:.............x:....:...:x:.......x...:..x..:.............::.:x...--...::.....x...-..x.xx.:::x......:x:..x..:.:....x.---------..:.....::.xx..x:...:. 34M2I37M1I95M2I14M1D34M9I22M 166/236 70.3% 250/94230402 0.0% 15/236 6.4% 13450057 NA +3235 chr4 + 190214555 66354369 66354368 66354425 57 TTTTCCTTCACTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTGTTTTTTGTTTTTTT chr4 + 94230402 78800053 78800052 78800109 78800053 78800052 78800109 57 TTTTCACTCTTCTGTGTGTGTTTTTTTTTTGTTGTTGTTGTTGTTATTTGTATTTTT .....x:..x::.x...x.....x...............x.....x.....x..... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -12445684 -81784718 +3056 chr4 + 190214555 66354386 66354385 66354435 50 TTGTTTGTTTTTTGTTGTTGTTTTTGTTTTTTGTTTTTTTTGAGATGGAG chr4 + 94230402 14574246 14574245 14574295 14574246 14574245 14574295 50 TTGTTTTTTTATTTTTGTTGTTGTTGTTTTTTGTTTTTAGAGGGATGGAG ......x...x..x........x...............xxx.:....... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 51780140 NA +3131 chr4 + 190214555 66355737 66355736 66355818 82 TTTTTCATTATGCTTGACATTTTTGAAACTGAATTTTGATACAGTCCATTAGCCTATCGTTACATGCTGGTATGATGAGATT chr4 + 94230402 63914614 63914613 63914695 63914614 63914613 63914695 82 TTTTTCATTATATTTGACATTTTTAGATTTAATCTTGGTTCCAGACTAGCAGCTTGTAGCTATAGGCTGAAGAGATGATACT ...........::...........::.x:.:.x:..x.x.x...x.:.x:...:.:.x.:..:.x....:x:x.....x.:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 2441123 NA +5980 chr4 + 190214555 66355973 66355972 66356094 122 AATCAATGGAGAAAGTTGT-AATGATGTATGAAATGAAAAATCCCGGCCCACCCAGTGCAGAGAGAAT--ACAAACTCTCCTTTGCAATCACTGCTATGCTATTTTCTCTAAATTATCATTCAAC chr4 + 94230402 10283608 10283607 10283732 10283608 10283607 10283732 125 AATCATTGCAGCGAGTTGTGAATGATGTATGAAATGAGAAATCCCTGCCCACCCAGCGGAAAAAGAATTCACAGACAGTGCTTTGCAATCACTTCTGTACTCTGCTGTTTGAAGTAGCATTTAGC .....x..x..x:......-.................:.......x..........:.x.:.:.....--...:..xx.x.............x..:.:..x.x:.x.:.:..x..x....:.:. 19M1I48M2I55M 95/122 77.9% 125/94230402 0.0% 3/122 2.5% 56072365 NA +22316 chr4 + 190214555 66367234 66367233 66367740 507 ATTCAAATCACTGTGTATGATTCCGTGTTGCTTGGGACTGTCAAGGTAATATCTTCCTTA----CTGCTTTGTCTCTTTAAACCTTCTTGATAATTAAATTTAAAAAAAGAACATAAATAAAGGAACGCGCCCCCAGAACTTTTCATTATTAATG---TTCTATGACTAAATTGGAAATCTGCTACTGTATCCCAAGGGGGTGATT----TAGCAGACTAAGAGTTTTGATTAAAACGGAATGAAATGTCTGACACGTAGTCTATTTATCAGTTATTATGATATGAAAACGCTCTAATCATTGTGGTGCCTAAATTAAGACTTCACAGCCTAAATGTCACTTCATTTTGCTTCTTTTGGTTTGGTGATGTTTTATGGGCTTATTATCTGCGAATGTGTATGCATGTGCGTGTGTGAATGGCACACATTCTTACTGATCTTCAAAGAAAAATAATGCGGCAAGAAAGCTTTCTAACACAAGCACTGTTCCCTATAGCTCCATGCTTCAGGAGAAATGAG chr4 + 94230402 52900478 52900477 52900955 52900478 52900477 52900955 478 ATCAAAAATGATGTTTATTTATTTGGATTGCTGGAAGGTGT-----TGATGTCTTCCGTGTTCTCCGTCTTGTCTCTTTAAACCTGCTGGATCAT--------ACAAAAGAACATGAATAGAAGAATTTGCCTCCAGAACTTTTCATTATTAATGATGCTCTATGACTAAATTGGAAATCTGCTACTGTACCCCAAGGGGGTGATTAATTTAGCAGACTAGGAGTTTTGATTAAAAGGGAATGAAATGTCTGACACGTAGTCTATTTATCAGTTATTATAATATTAAAACACTCTAATCATTGTGGTGCCTAAATTAAGGCTTCACAGCCCAAATGTCACTTCACAGTGCTCTTTTAGATCTGGCTGTGTGATACAAGTTTATTATCCGTGGGCACCTGAGAATGTATGAGTATA---------------TAGAGATCTTCAA------------TAGGAACAGAGTGGTTTAGTAAGAGCCCTGCTCTTTACCTCTTCTTGTTGAAGAGGACATGAG ..:x...x::x...x...xxx.::.x:.....x.:::x...-----.:..:......x.:----.:.::................x..x...x..--------.x..........:....:.:...:x:...:......................---:...............................:...............----..........:...............x..........................................:....x.....:............................:..........:.............:xx....::...x.:.:...:x:...xx..:::.:........:.:.:::::x.:x.x....::.x..:.:---------------..xx.........------------::.x..x.:..:xx.:..::.x:...x...:..::..:xx..:.x..:.xx..::..x..... 41M5D14M4I31M8D52M3I48M4I205M15D13M12D63M 358/467 76.7% 478/94230402 0.0% 51/467 10.9% 13466756 NA +3099 chr4 + 190214555 66405509 66405508 66405572 64 TCTAAAGTACTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTG chr4 + 94230402 90152622 90152621 90152685 90152622 90152621 90152685 64 TCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ...x:..:xx..:..:.....:..:....:.x.............x...x::.:.:.....x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -23747113 -70483289 +20644 chr4 + 190214555 66408247 66408246 66408661 415 GAGTTATATAGCAGAGATTGTGTCTAGCATTTAAGAAGTTGCAGCTACATTCCATTATCAAAGATATATTTGTTAAAACATGCATATAAAAGGATTTGTAATTGAAGCACAGCTTTGATATATTTAATAGCATGTATAACTGCCATCTTATTTTAATAGGCAATGTTTTAGGTGCATTAGCAGTAAT---ATAATGTCTTTTCCGTGTGCTCTTGCCATTAGC--ACTTTTTCCCTCCCTTTCTTTTAGTTAATCTTAAAACTTTAATGTAATCCAAATACATTAACATA--TTTTCTGCCCTCACAGTTCTTGAACAGAAGGGAGCTTTGAAATGAATTTTCCATAATTGAAGGAAGGATAGTTACTATACAACTAAATCATCAATGC-TTTTTCTCAAATTCTGCCTGCCCAGTGGTTCAT chr4 + 94230402 52913406 52913405 52913814 52913406 52913405 52913814 409 GAGCTGTATTGTAGGGATCTTGTTTAGCATTTAAAAAGCTACTGCTGCACTCTATTATCAAAGACATATTTGTTAAAACATGCATATGAAAGGATTTGTAATTGAAGTACAGCTTTGATATATTTAATAGGATGTAAAACTGCCATCCCTTTTTAATAGGAGATGCTTTATGTGCATTAGTAGTAATATAATAATGCCTCTCCACTGAGCTCTACCCATTAGCAGACTTTTTTTCTCCCTTTCTTTTAGTTAATCTTAAAACTTTAATGTAATCTAAACACATTAACATCTTTTTTCTCCCCTTTCTATACTTGGA------AGTGCTTTGAACTGAACTTTGTTTCA---AATAAGAGATAGC-----TACAAACATGGCATCAATATACAGTGCCCCGGCACTGCCTGACAGATGGCCCAT ...:.:...x.:..:...:x...:..........:...:.:.x...:..:..:...........:......................:...................:......................x.....x..........::x..........x:...:....x.........:......---......:..:.:.xx..x.....xx........--.......::........................................:...:..........x--......x....:x.x:.x....:.------:.x........x....:...x:x.x.---..x:.::.....:-----.....x:.x:x.......::-:xx.x.:.x:::x.......x.x::...::... 187M3I33M2I65M2I24M6D26M3D13M5D20M1I33M 317/401 79.1% 409/94230402 0.0% 22/401 5.5% 13494841 NA +3012 chr4 + 190214555 66425805 66425804 66425843 39 AAAATATTCCATGGAAATGAAAAGCAAAAAAAAAAAAAA chr4 + 94230402 35083422 35083421 35083460 35083422 35083421 35083460 39 AAAATATTTCATGGGAATGAAGAGGAAAAAAAAAAAAAA ........:.....:......:..x.............. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 31342383 NA +3288 chr4 + 190214555 66441449 66441448 66441506 58 ATTGAATTTTGAATTCTATTACCAAAAAAAAAAAAAAAAAAAACAAAATAAAAGGAAC chr4 + 94230402 90876765 90876764 90876822 90876765 90876764 90876822 58 ATTCAAGTTTGAATTTTCTTACCAAAAAAAAAAAAAAAAAATCAAGAAAAAGAGTAAC ...x..x........:.x.......................xxx.:..x..:..x... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% -24435316 -69795086 +3096 chr4 + 190214555 66472207 66472206 66472276 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -9560990 -84669412 +10660 chr4 + 190214555 66484534 66484533 66484770 237 TTTGG-ATCTGAATCCATATCTGGATGTCTGATACTGCTGTTTTAATTCTTTCTGAATATCATGTGTGCTTTTATTAAAAAAAGACAGACACACCCATTTAATCTTTCATATTGGCCACAGTAATAACCTCCTATTAAATATTTCA---TATTGTACTAATAAAGAACACAAGACATTATGCAAAACTTGGCACAAACTTGTTTCAGGAGAGCATCTGCTTAAAAATAAAACATTTGAGAG chr4 + 94230402 52931991 52931990 52932221 52931991 52931990 52932221 231 TTTGGCATCTGATGTTATATCTGTGTATTTGAT---GCTGTTTCTTTTGACTCAGAATACTAGGTTTCCTCCTCAGGAACTGGGGCCGACAGACCTATTTAATCTTTCATATTGGCCACAGTGATAACTTCTTATTAAATATTTCATGTTGTTGTACCGATAAAGAGCATAAGA-------CAAAACTTGGCATGAATACTATCCAGAAGAGCATCTGCTTAAAAATAAAACACTTGGAAG .....-......xx::.......x:.:.:....---.......:xx..xx:..x.....::.x..x.x..::.xxx:..xx::.:.x....x...:..........................:.....:..:..............---.:......::.......:..:....-------............::..:x:xx.:...:.........................:...::.. 5M1I27M3D110M3I25M7D60M 173/227 76.2% 231/94230402 0.0% 14/227 6.2% 13552543 NA +3243 chr4 + 190214555 66497639 66497638 66497712 74 GTATATATATATATACTGCTGTATATATATGTGTGTGTGTATATATATGTATATATACATATATGTATACACCA chr4 + 94230402 27325493 27325492 27325566 27325493 27325492 27325566 74 GCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCA .::...:xx.:.....xx...x.:x..x..:.........:...:.:...:..::..........x.x...x.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 39172146 NA +3147 chr4 + 190214555 66501041 66501040 66501099 59 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACC---------TGGGTTGTGGA chr4 + 94230402 76033211 76033210 76033278 76033211 76033210 76033278 68 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ....:.:...........::........x.xx.x...x..........---------....:...:.. 48M9I11M 48/59 81.4% 68/94230402 0.0% 9/59 15.3% -9532170 -84698232 +3118 chr4 + 190214555 66516441 66516440 66516535 95 ATAAATAAAACTCTCCTCTGTCTTCTTTGAGATCCTGTATATATATATATATATATGTGTATATATATATATATATATACACATACATATATATA chr4 + 94230402 25906357 25906356 25906451 25906357 25906356 25906451 95 ATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATA ....x:....x.x:.:::x..:......:x:xx:....x.::...:..:..x.::..:::.:x.x...x:.......x......:.x....:... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 40610084 NA +3180 chr4 + 190214555 66518843 66518842 66518901 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...xx:.x............ 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -9514363 -84716039 +3306 chr4 + 190214555 66540978 66540977 66541051 74 GTGCACCTGTGGTCCCAGCTACTTGGGAGGCTCAGGCGGGAGGGTCGCTTGAGCTAAGGAGATCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:...........::.....x..x.xx.x.::x.:.....:.:x..:..x.:x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -9492226 -84738176 +20758 chr4 + 190214555 66565258 66565257 66565878 621 CCTGCTGTGGGAGGCTGAAAATAAAAGACAATCTCACCACATTAATAAAACATGAGCCACAACTGAATCTGAGGCCAACTAAACCACCAGAGATCTAGTGTGACGCTTAATTTTGTCGATGATGGAAGTACTTTAGCCCAAGGTAACTTTCATGGAGGCCATATTTGCGTGCAAACCTTCACTTAAAGCACTACCGCCGGGCAGAGTTAATGTTCATGGGAGTGTAAACTTACAGTAAAAGGCAGGAACCACATAAGAAGCTACATCACTCAAGCCAGTAAACTTTGGTAGTGGTGTAATGTTTTATTGAAGCTCATTTCTCCTCAAAGGAGATCTGAAAATCCACTTAGTGCCCTCAGAAAATTGTCTGTTTGGACTGCATGAACTGGTTCCCAATCACAGAAAGATCAAAACATCAAAAGAAGCTAATAGGGTTTTGCCATGAAATACAGTCCCAAGAGATCTAGAATTAAAAAGGGGCGGGGGAGGTTTCCAGGGTAACTATTAAGTTCG----AGGTTTTGCTGGAATTAGGGGAAC-ATACTTCAGTAAAGAG-AAGGATAGGGGAGACAGAAGAAACATACATGAGAAAGGGGAAATCAGAAGGAATAAAAAATAAGAAAA chr4 + 94230402 52942259 52942258 52942854 52942259 52942258 52942854 596 CCTGCTGGGAGGG---------AAGAGACTCCCAAACCTCATGACTAAAACATGAGGCACGGCCGCACCGCCAGCAGCGTTACCCACTGGAGACCCTGCAGAGCGTGGCCTTTTGCTGGCGTGGGAAGTGCTTTTGCCCGAGGTGGCTTTTGTGGAGGCCATGTTTGCGTGCAAACCTCCACTTACAGCAACACGGGGCAGCCAAGCTGATGTTCATACGAGTGTAAACTTACAGCGAGAGGCAGAAGCCGCCGGAGATGTTCAAGCGCTGCAGCCAGTCAGCGTGGTGAGCGGCCTCATCTTTTATTGAAGCCCA---CTCCTCAGAGGAGAGCTAAAAATTCACTCAACGCCATCGGGAAAGTGTCTGTTTTGGCTGCAGAGAATGGTTCCCGATCACGGAAAGATAAAAACATCAAAATAAGCTAATAGGGATATGCCTTGAAATTCGGTCCCAGCGG---------------GCGGAGGGCTGGGTTTCCCGGGGACACATTAAGCATGGCTCAGGGAGCGCAGCACGCAGGCGCACTGGAGCCCAGCAGCCAGAAAGGACACTCAGCACAGGAAAAACTaaaaaaaaagaggagaaa----aaggaaaaaaaaagaaaaaaa .......x.:.:.---------..:....xx:.xx...x...x.x...........x...::.:.x.:.xxx:..x:xx.x.x....::....:.:x.::x::..:xxxx.....::.::.xx......:....x....:....::....::..........:...............:......x....x:..x.xxx:..x:..:.:........:x................::.:......:.:..:.xx:...x.:.xx.x.:..xx.......x.:.x.x.xx..:..:x.x..x............:..---.......:......x..:.....:....:.::...x..:.:...x.........x.:.....x::.x........:.....:.......x............x............x.x....x......x.:......:x:.---------------.x..x...xx:.......x...x.xx:......:x:.----...xxx:..x.x.xx:...x.x..-:x.x::...:.:xx..-.....:.xxx::x....:.:....xx.x.x:.:.:...:....----......x......x..:.... 13M9D294M3D142M15D37M4I24M1I16M1I43M4D21M 407/590 69.0% 596/94230402 0.0% 37/590 6.3% 13622999 NA +3396 chr4 + 190214555 66577451 66577450 66577568 118 ATGATCATTATTTGTGGTTCAGATGCTCACT-CTAAGCAATAAAATTAAATTTTAAAACTCCTAGACTGTTGAAATAAATGAGTTTTTTTCTTTCTCTTTTTCTTGTTTGCTTTTTATT chr4 + 94230402 63728648 63728647 63728766 63728648 63728647 63728766 119 ATTATAATTGCTTGTAATGGGAATAATAACAACTAAGTATGAAAAATATATTTTCAATCTACTAAAAGTTAGAGCAACATTAATTTCTTTCTCTCTCTTTTCCCTGTTTGCAGTTTCTT ..x..x...::....::.xx::..:x.x..x-.....:.xx....x..x.....x..x..x...:.xxx.x..:xx.x..x.:...:.....:........:.:.......xx...x.. 31M1I87M 78/118 66.1% 119/94230402 0.0% 1/118 0.8% 2848803 NA +5889 chr4 + 190214555 66581703 66581702 66581925 223 CTGAATACCAAATTATTTGACTAAG--TTACTAACCAGTCATCCAGCATGATCCTAATTGGTTTGTGAACTTACCTACAACTGAGATGTAACACTTGGG-ATGGAAGCACTTGCTGAACC-CTGTGATGAGGAGGTATCTGTGTTTTGGCACATCTCCAATATTTAATTAACCTGTCATCTTTTATTATGTCTCTGTAAAGCATCTAAATCTTGTACAAGTTTAACA chr4 + 94230402 52949161 52949160 52949376 52949161 52949160 52949376 216 CTGAACACAAGCTCACCCAAATAATGCTTTGTACCAAATAACTCAGGTTGAGCCTAATGAGTTTGTGAATGCACAAACAAACATGATTTATCACATGGGCAATGGGGCACCTGCTGGGCCACCATG-----------TCTTCTGCTTGGCCCAACTCCAGTATTTAATTAATCTGTCATCTTGCGTTATATCTCTATGAGGCATGTGAACACATTCCAAGTCCCACA .....:..x.:x.:.::::.x...x--..xx..x.x.:.x.::...xx...x......x:.........:x:..xx....x::x...x..x...x....-.xx.::....:.....::..-.::..-----------...x:xx:.....x..x.....:...........:..........x::....:.....:.:.:....x.:..:x:xx.x.....::x... 25M2I72M1I20M1I5M11D90M 140/212 66.0% 216/94230402 0.0% 15/212 7.1% 13632542 NA +17430 chr4 + 190214555 66588627 66588626 66589078 452 TGTTAGACCACATAA---------GGCGTGGTTACATTATTCCTTTAGCAGTTACTTTTAAAAAATTATATACAATTAATTTGTCAGAGCCATTT-ATTTTATGTTAATTAAATGCCTAGACAATTCTTCTTGTATAAGATGACT-------------------------ATCAGCATTAGTTCAA-----CTCCATTCTAGAAGACTGCAATACGGTGTTTATTACTTATGTAAATTCAGTTAATTATACACCAACTCAGTTATCTTATTTATTGCATTTCAATTAGTATCCTTGTAATAGTCAGTAGCTCTTTAATTAACTCACAAGAATAAGAGATGTCTTGTTAAATGTAAATTAAATAGATTTAAATAGACAATAGATTGCAAATGGTACA-TCACTGCTAA-TGCTATAGAAAACTGTTGCTGGAAGTTCTAAACGTACTCAGTACCATCTGCCTTCATCTG--AGCAAGAAGATAATTCC-ACTTTTTTT chr4 + 94230402 52951249 52951248 52951727 52951249 52951248 52951727 479 TGACAGATCACACAAAAGCCATTTGGTGTG------TTATGCTTTCAATGGTTACTTAAAGGATATTACATACAATTAATTCACCATAGTTATTTTGCATTATGCTAATTAAATCTCTGAATACTAATTTTAATATAGGTTGTTTTGTGTGtttttttttttttttttaaatGAGCATCAGTTCAGGGTACTTTTATGTTAGAAGGCAGCAATATCACGTTTATTACGTATGTAAATTCCCTTAATTATACTCTAACTAGGTTATCTTATT----GCATTTCAAT------CTCACTAAGAGTCAGTAGCTCTTTAATTAAGTTGAGAGAGCAAGAGGTGTCTTGTTAATTGTAAATTAAATAGATTTAAATAGACAATAGATTTCAAATGGTAGATTTACTTCTAAGTGCTATAGAGGA--GTTGCTGGAAGGCCTGAGCACGACTTGTGCCATCTGCCTCAGTTTGTCAGGAAGAAGTCAAATCCTACTTCTTTT ..x:...:....:..---------..:...------....x.:..:.:::.......xx.::.x....:............:::..x..::....-::x.....:.........x:..::.:.x.xx..:.x:....:.x..x:.-------------------------..x.....:......:-----:.::..x:......:.x......:x::.........x...........xx..........x.:....x:...........----..........------.::xx...x.....................x.::x:...::.....:...........x..................................x.........x.-.:...x....-.........::.--...........x:..:.:.:::x::x..:..........:x:.:..--..x......x:..x...-....:.... 15M9I6M6D59M1I49M25I16M5I80M4D10M6D105M1I10M1I12M2D46M2I17M1I9M 330/434 76.0% 479/94230402 0.0% 63/434 14.5% 13637378 NA +19210 chr4 + 190214555 66636412 66636411 66637410 999 TTGGCCCCATGTCACTTTCATCCCATTGGATGACTGTCATGGGAGCTGCCCAATGGTGCGCTGCTAATGAGGCAGCTTAAAGAGCAGCTGGGGATGTGCAATTGCTGGATTAGGGTCAAGGCCAGGAGAGAAAATGGATGAGAGAGATAGAGCCTGAATGACTGCCAGTAAGCAGGGGTTCTATTATCCTGCTGAAGCAGGACATTCATTACCATCTATTGTAACATAATTTGGGCTCAGTCAAGCTGTCTCTCCCTCTTTTTTGGATTTACAATTCATAAACCACAAATGGTCCAAAGGGTGTATTGTCCC-TGTGGCCATGTAACCCTGGGCCGG-GGGAGGACTGGCAGAAATGAATGAGCTATGAAGTTC-----CTGGTGTGAACACCATCAGGGCTGACACCTTGTTTCTTGGAGTTGTGACATAAGTTGTAGGCACAATGCTGACAAAGTTTTGCATCTCTCTGGAGCCAGGTTTGCTCATTAAGCAAAGATAAAATAAAAAGTCCTTGTTTATCCTTTGCAAAAAT-----------------------------CAAATCC----TAATGCTAACAGCCGGTATTTCCATGCTAATTTCCTCTAGTCACTGATGAGATTACTGCACAGGAACAGAAGTG----------AAGTTTGTTTT--TTCCACAAGCATACAAATGCTTGCTTTTTTTAGATCAAGTTCTTCCAAGTCCCAGAAAATTA-TCTGTTCTATTTTTTAGTAGGTTTG-TGGTATTTCAACACATGAAAAATGTAGAAAATTGTCTCGTGTCT-CTTTTA--TCGAAAAGCTTCCTTTGAAACAGGATAAATGTGTCT-----CTCCTTCCTCTTC-------CCTTCTCCTTGGGCCCTTACTGATCTTTTCAATTATACTATTTA---TTATCTTTTGGATTCAGGGCCAAAACCCACCTGCCATCTGAACTAA-CGAGACCATAGTGTTATTGTCTCCGTGCTGCACTCAGTT-AGGAAGGCAAATGAGTTTGGTGAAAAGCTAGCAA--GCACAGAAGCTCGGAGAGAAAAGGATTCAAG chr4 + 94230402 52956939 52956938 52957926 52956939 52956938 52957926 988 TTGGCTCCCTGCAACTC-CTTCCTGCTGGATGACTGTCATGGGAGCTGCC------------ACTCATGG----------AGAGCAGCTGGAGATGTGCATTTGTTGGATTTGGGTCAAGGCCAGGACTGCAAGTCAGGGGCAGAGAGGGAGTCTGTACGAGTGCCAAGAAGCAGGGGTGCTATTATCCCACGAGAGCAGAACATTCACTACCAGCTTTTTTAACGCCTGTGGGGCTGAGTCAAGCTCTCTCTCCTTC-TTCTGAGATTTGCAACCTATAAATCATGAATAGGCCAAGCAGCTCATTGTCCTGGGCAACTGTGTTGCCCTGAGTGAGCAGGAGGCATGCTGCAAATGAATGTGACACGAAGTTCAGACTCAGGGATAAGC-----CAGAGCTCAAATCCCA----TTGGTGCAGTGACAAAAGTTATGGGCAAAGTGCTGCTGTGTTTTTGCACCTCCCTGGTGCTA-GTTTGCTCATTAAGTAGAGACAGAAATAAAAGTCTTTCTTGACTCTGGAGGCAAATGGTGCGGGGAGGAGGGGGATGGATGCTTCCAAGTCCTCCATGAAGCTGACTGC----ATCACCATGCTAACTTTATCTTGCATTT-------TGACAGGAAAACAAAAAAAGTGCATGACACAAGAATTTACTTTCCTTTAAGAAGCATCTTAAAGA-TGCTGGTTTTAGTTCCATCTTTT-----------AAAGTTATTTTTTTCTCCTTATCTGTGGCATGGATGGCTTCCCACTAGATACAAAAAGGACCCAAGTGCTTCTCTTCTGCTGCTAACACACAAAGCTCCTATTT---TAGGATGAGCTTACATAAGAGCTCCTCCATTTGCGAGCCCTCCTTCCCTT------CATGCAGATATCTCCAGTAATTATGCTTAGCTTCATCTTT-------------AAAGCCCACCTGCTGTCTGCACAAATCAAGAT--TAGCAAGATGGTTTGTGTGCTGTGGGTAGCTGAGGAATGTGAA------CAGTAACACACTGGGAATTGAGCAAAGCCATGATAAGAAAAGAATTCAGG .....:..x..:x...:-.x...:::........................------------:..x...:----------...........:........x...:......x...............xx.x..:.x::x.:x.....x:...:...x.:..x.....:x..........x.........::.x::.....:.......:.....x..x..x....::xxx.x.....x.........x.......:..-..:.x:.....:...:::.....:..::...:.x....:x:.:x:.......:-x.:::.::...x:.....:.:x:.-:.....xx..x::x.........x.x:.:.......-----.x..x:.:.:.-----...:...x.x.:.:::----....x.:x......x.....:.:....x.:.....x::x:x.......:...:....x..:.-..............:.:...:.:..xx.......:..x..x.::..xx:x:x....-----------------------------...:...----.:.x...:..x..----..:x.........:..:x...x.:xx:.-------.x..x.x.x.:x..x.:.....----------:.:...::...--..:x.x......x:x..x.x-....xx......x..x.x:.:..-----------...:...-.:.x....x:..x.:x..:.xx.x.-...:x.::..x:.x..:x....x.x.xxx..x..::..x:x...-..x:..--x.:x......:.:x..x---:.....:.::x.::x.-----.....:.x.:.x.-------.....:.:.------.x.:.x...x.:.:..:.x..xx.::...---.:......-------------...:.........::....x..x..-.:...:--...::xx..x..:.x:......::xx:..:.-.....x.::..------::..:.x.x:..:.x..--.x:..:.:x.x:.:x:.......:.....:. 17M1D32M12D8M10D178M1D53M1I24M1I36M5I11M5D16M4D62M1D56M29I7M4I13M4D28M7D22M10I11M2I20M1D23M11D7M1I25M1I44M1I6M2I17M3D16M5I13M7I9M6D29M3I8M13D25M1I6M2D31M1I11M6D17M2I31M 615/912 67.4% 988/94230402 0.0% 163/912 17.9% 13679473 NA +3085 chr4 + 190214555 66672372 66672371 66672441 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -9360825 -84869577 +3024 chr4 + 190214555 66679448 66679447 66679517 70 ATATATATGTATGTGTGTATATATACGTATATATACGTATATATATTTGTGTGTGTATATATATATACAT chr4 + 94230402 22600198 22600197 22600267 22600198 22600197 22600267 70 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGT .:.:.:..:.x::::..:.x.:.:.:.:...:.x.x:...:...................::..::..:. 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% 44079250 NA +3361 chr4 + 190214555 66679465 66679464 66679572 108 TATATATACGTATATATACGTATATATATTTGTGTGTGTATATATATATACATGGTGTGTGTGTATGTATATATGTACATATACGTACATATATACATACACACACAC chr4 + 94230402 86234543 86234542 86234648 86234543 86234542 86234648 106 TATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATA--ATGTGTGTGTATGTGTGTGTGTACACAAACTAGAATACAGGTATTTTCAAACAC .......x::......xx:...x...:.x:.x.:.x....xx..x..:..:.--:.............:.:.:......:.x..xx:x...:.x::..x:x..x.... 52M2D54M 70/106 66.0% 106/94230402 0.0% 2/106 1.9% -19555078 -74675324 +3016 chr4 + 190214555 66679526 66679525 66679612 87 TGTATGTATATATGTACATATACGTACATATATACATACACACACACATATCATGGAATACTACTCATTCATAA--AAATGAATGAAAT chr4 + 94230402 23247723 23247722 23247811 23247723 23247722 23247811 89 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAAT ...:.....::.:::....x..:.x......:....:...:.......:.:x.x.:..x.xxx:x...xx....--.x..:x....... 74M2I13M 59/87 67.8% 89/94230402 0.0% 2/87 2.3% 43431803 NA +3005 chr4 + 190214555 66702592 66702591 66702645 54 ATATATCTCCACATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAAAT chr4 + 94230402 70089058 70089057 70089111 70089058 70089057 70089111 54 ATATCTCTCTCCGTCTCTCCCTATATATAGAGAGAGACAGAGAGAGAGAGATAT ....x....:x.:.x.x.x:x................x.............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -3386466 -90843936 +21029 chr4 + 190214555 66708656 66708655 66709019 364 CTTGCTTTTCCTATTATTTTTTTCCACATGGGCTATTATATTG---ATAAATCAAAAGAAAAAAGATCAAATAGACAAAGCAACAAAGCATTAAAGTGCTCACTTCAGGGTTGCAGCCAATCTAATTAATTTTTCATTTGGTTCTCATGTATTGGACACCAATCAATTTGGGATTATGTTTACAGAGTTATAAAAGGAGAGGAGATCGGTCCCTCAATTTGTTGTCT-AGCTGTCCAAATTAGTCAGTTAAATGATCCTGGGGGACATTATAAACTGTATGAATAGTTTCTTGTAAGTACCTTTTCTTTTAATTACAGACCAAGTCATCAACACTTCCTGCAGATCTCGACT--CTGATAGAAGGGAAAA chr4 + 94230402 52972983 52972982 52973350 52972983 52972982 52973350 368 CTTTTTCCTCCTTTTTTTTTTTTCCTCTCCCCTTTCTCCTTTGCCCATAAATCAAAGAAGAAAGGATCAAATGGACAAAACAACAAAGTGGTAAAGTGCTCACTTCAGGGTTGCAGCCAATCTAATTAATTTTTCATTTAGGTCTGATGTATTAGAGGCCAATCAATCAGGGATTATGTTTACAGAGATGTAGAAAGAGAGGAGACCAAGTCCTC-ATTTGTTGTCTGGGCTGTCCAAATTAGTCAGTTAAACGATCCCAGGGGAGATCATAAAGGATATGAATAGGTTCTTGTAAGTACC-TTTCTTTTAATTACAGACCAAACAGTCAACACTTCCCGCAGTCCTTGACTTCCTGCCTGAAGGGCAGA ...x:.::....x..x.........x.x:xxx:.x:.x:x...---..........::.:...:........:......:........::x................................................:.x...x.......:..x:.........:x..................x.:..:..:.........:.::x:....-...........-:.......................:.....::.....x..:.....xx:.........x..............-.....................::x:...........:....x:..:....--...x:x......x.:. 43M3I169M1D11M1I73M1D50M2I16M 295/362 81.5% 368/94230402 0.0% 8/362 2.2% 13735673 NA +3039 chr4 + 190214555 66720947 66720946 66721008 62 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAACTGCTTGAACCTGGAGGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...::.x....:.:...........::........x.xx.xx..x::........::..:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -9312257 -84918145 +8412 chr4 + 190214555 66724269 66724268 66724847 579 AAAAATAGGTCATTTTCAGCAGACAATCACACG-----TGTCAGCCAACGATAGAGCTCAACCATAAAATACATTTCTTTGACAGAATAGCTTGAAATGTTTCATGAGCC-----TTTTTTCCCTCTCCACCATGTTTTCCTA-GTGCAAGATTT--------TTCCTTTTCGCATATTTAAATTCATTTCATTGACAACAGGCATTGCAAACT---CAATGATTTCTCTGTGCCAAATGAATGTCTGTCAAAAGGCTCAGGTGAAATCTGTCTACTCCTGGTTGACCAAATTGATCCAGCTG--CAGTAAATGATGAAACAGATCATTCATCTAAGGTTGGCCATGCCAAAAGGTTATTCCTTTCCACTTATCCACGGCTGCTAAAAAGTGGGCAACTG----------------ATTTTATCTTACAACCAGAGCTTAGGGTAGTTGAGTGTTTTCAGTACCTG-TGAACATCAATGG--CTTTGGACATAATTAATCGTGCTGAAATCACTTCATTATTTTAATGAGCTTTT-------CTCTTTCCTCTAGCTATGATAATAAGTACATGGGAAAGAATTTTTTCTCATTATTTCTGAAACTAAAGGAGA--GCAAAGGGAGCGAAA chr4 + 94230402 52979458 52979457 52980061 52979458 52979457 52980061 604 AAAGGAAGCACATTTCAAGCAGTTCACCATATGCAACCTGTCATCAGAAGTGATGGATTAACCAGAACATACATTTCTTTGACAGCATAGCTTGAAGGGCTTGGTGAGCCCAAGTTCTTTTCCCCCTCAATCATGCTGGTCTACGTGAGAGATTTCTTTTCTCCTCCCTTATCCACATTTACATCCAGTCTGCTGGCAATGTGCCTTACAAGCTCTGCAGTGACTTCTGCAAACCCAATGAATTGTTGTCATCA-TCCCAATCCAAAACTCACCCCCTCCGAACAGCCAAACTGGCTGTGCCACCCAGCTAACCA--AAACAAATCGTTCATCTTGGTTCGGTGGCATCAAAGCAGCATT--TTTGTATATGTC--------CTACAAGGTGAACTACAAGGACTATTATTGTACCGTTACATCTCTTATCCATGTCACATGTCA---GAAAGCTTTC--CTCCTGCCGGACAGCAAGAAATTTTTGGACATAACTAACCAT-CTGAGG-CAATCCATTATTTTAATGAATCTGCTGAAGAGCAGTGTTCTCTAATAA--AAAACACTTGCATGGCAGAAG-----CTCTCATTACTCCCCATACAGAAGCAAACTGCAAAAGAGGGGAAA ...::x..xx.....:x.....x:x.:..:.:.-----.....x.x:.x.xx.x:.x.:.....x..x.................x..........:x.:..x:......-----.:.......:...x.:....:.xx:...-...x:......--------:...:..x:x..:.....x..:..x.::::..:...::x..x..:...:..---..:...:....x::x:..x.......xx:.....xx.-x.:..:x:x...x..xx.:x.::.:.:x:::.....:..:::xx..::--...:x..:x.--.....:...:.......x:.x.:..:x::::....:x:x:...--...x:.:x.:..--------...x..:...::.x..x:----------------:..x:....:x:.x...x:x.x:.x.x:.---..:x.:....--:x....-:.:...x...x::--:...........:...:.:.-....::-..x.:..............:::.x:-------.xx.x.:.....::x.--.x..:.xx.:.....x.:.::-----:........:.:.:x.x..x:...x.:.--.....:.::.x.... 33M5I72M5I28M1I11M8I51M3I37M1D48M2I10M2D43M2D12M8D18M16I29M3D10M2D6M1I13M2I20M1D6M1D25M7I16M2D21M5D28M2I15M 349/552 63.2% 604/94230402 0.0% 79/552 14.3% 13744811 NA +3210 chr4 + 190214555 66753124 66753123 66753206 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:...........::........x.xx.x.:.x.:........::.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -9280073 -84950329 +3120 chr4 + 190214555 66761555 66761554 66761607 53 AAACAACAACAGAAACAACAACAACAAAAACAACAAAAACAAACAAACAAAAA chr4 + 94230402 45330823 45330822 45330875 45330823 45330822 45330875 53 AAACAATCACGTGAATAACATCGTTAAAAAAAACAAAAACAAACAAACAAAAA ......:x..:x:..:....x.:x:.....x...................... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 21430732 NA +14277 chr4 + 190214555 66763973 66763972 66764403 431 AAAAAAGGTGGCTAACTGCCAGT-CAA-TCCAAGTTACGAAGAAGTTAAAGCAGTAAAT--TTTCTTCCATTACATACAGTTAAGCATTAACATTCCTGTTGTTTTAATCTCTGCTATTAGTACAGCAGTGAGAGGAAA--CAGCATAATCATGAATCTAAACTCAGG--ATGATGACTGACAATCTGTTGGTTAAAGAAACTAATTTACCTAGCATAAGTCTAAAGAGGGACCAAAGAACTAATTTATCTTTTGATATGGTCCCAATTCTAAATGAGAGGAGAAATGGCAATGCATTAGTCTATGTCTCTGATGTCACAGTTCTAATTTAACATATTACTGAGAAGATAAATCTTTGAATACGTCTTGCATAAATAACAT--ATTGTTGTAAGTCCGTTAATAAACCATGAACAATTAGCCTGGGAACCTCTAGCACTCT chr4 + 94230402 52993187 52993186 52993617 52993187 52993186 52993617 431 AAGAAACATGAACTACTGCCAATGCAACTCCTTGAAACAAAGA--CTAAAGTGGTAAACAAGTTATTTTTTGAGATCCTGCAAAGCATTCAAATTCCCAGTGTCTCATTTTTTACAGTGAAGAGCATAACAAGAAGAAAAGCGACACAGACATGAATCTA---TCGGGTGACTGTGATTGACACTGAGCTGGTGAAGGACA-----GCACTGAAAATGGATCTACGAAGAGACCACAAAACTAATTCCTTTTGTGATATAATCCTGATCCTAAGCTACAGTAGAAATGCTAATACATTAATCTATGTCTCTAATGTCACCATTCTAATTTAATACATTACTAAGGAGATAAATCTCTGAATACATCCTGCATAAATAGCGTGCATTGTTATGATTTTCTTAATAAGCCGTGGAAAATTAACATAGGCATTGCTAGCAGCCT ..:...x:..:x:x.......:.-...-...xx.xx..:....--:.....::.....:--x..x..::x.x.x..x.x.:x.......x.x.....::x...:.:.x.:.:.:.x:.x.:x.xx::.:::...:....--.::..:.:x..........---..:..--.:x:...:.....x.xx.:....x..:..x.-----x:..:x.:x..:::....x::..:.....x.:........:x.:..x......::...::..:....::x.x..x.......x:...:.....:...........:.......x:...........:.:......:..:..........:.......:..:..........:.:.--......:.:.x.::x.......:..:..:.x.....:.x.:..x.::x......x:.. 23M1I3M1I15M2D14M2I78M2I19M3D5M2I31M5D175M2I58M 288/421 68.4% 431/94230402 0.0% 20/421 4.8% 13770786 NA +3720 chr4 + 190214555 66780498 66780497 66780571 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCAGGGACGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x...x..........x:.:.xx.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -9252706 -84977696 +3413 chr4 + 190214555 66782582 66782581 66782652 71 ACATGGTGGCGGGCACCTGTAATCCCAGCTACTCGGGAGCCTGAGGCAGGAGAATCACTTGAAACCAGAAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....:.--...x....:.:.........:.::..x.....x.xx.x...x........x....... 11M2D58M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% -9250614 -84979788 +23314 chr4 + 190214555 66797495 66797494 66797889 395 TGATAAATATGTATGTCTTATTTCTCCTTTCCCACTGCTTTCCATCCAGCTGCAGCTGGGAA-CCAAGCAATAAATACTATTTATTTATTTTAATAGTATGCTTAGTGGAAGTATTACCAATATTTCCTATGCTTAAAAACATCCCCAAATGCATTTTGT-GTTAGGCTCAGCATTTTCATCGTAATTTACAACTT-AAAAGGGTAAATTCTATTACTCTATGTCAAACCAACAACTGGGTAAGTGCAGAATGTTACCCTGTGAACTATGACCAAATTTATTGCTGCAGTCATTAGTACATATTGATTCTGCTTATAACAACCCAAAGGGAATAGTAAAGCTATTATGCTGGTGTTTGGT---CTCTCTCTCTCTGAGAGGAGCCAGGCTTGGCACAGCCA chr4 + 94230402 52995737 52995736 52996121 52995737 52995736 52996121 385 TGATAAACATGCATGCTAGGTTTCTTC----------------ACCCAGCTGCAGCTGGAAAACCAAGCAATAAATACTATTTATTTATTTTAATAGTATGCTTAGTGAAAGTATTACCAATATTTTCTGAGCTTAAAATCATCCACGAATGTATTTTACCATGAGGCTCAGCATTTTCATAGTAATTTACAACTTTAAAATGGTAAACTCTATTACTCTCTGTCACACCAACAACTAGGTAAGTGCAGAATGCTACTGTATGAAGTATGATGAAATTTATTGCTGCAGTCATTAGTACATATTGATTTTGCTTATAACAACCCAAGGGGAATACTAAACCGATTACGCCTGTGCTGTGCTCGCTCTCACTCCCTGACAGGAAGCAGATGCTGCAATGCCA .......:...:...::xx:.....:.----------------.:..............:..-.............................................:.................:..:x........x.....x.:....:.....::-:.x.................x..............-....x......:...........x.....x..........:...............:...:x.:....x.....:x...................................:.................:.......x....x.x....:..:x...:.xx.:---.....x...:....x....:x...::x:x...xx.... 27M16D19M1I97M1I35M1I163M3I38M 320/379 84.4% 385/94230402 0.0% 22/379 5.8% 13801758 NA +6808 chr4 + 190214555 66813995 66813994 66814331 337 GCCTAGAAATGGAATAAGCATTTGCTAGTTATCGTGGGAAAAGCTATTTT-CTCTCCTCTCAGC--AAGACGAAAAGAATGAGGCTA-GAATGCTTTGTCTAAAAAT-------------CTTTTTCAAAGAAACTAATATTATAGTATAAACTAAGAAAGGTGCTGTGCTTTCAGAAAGCAGTTCTACCAAACTCATTGATTGTTTCCTGCCCATAGATAATCCTGAGTAAGTATGCTCATTGATTTATGTCAGTTTTAAAAGCCCCAATTCTCCTGAATTATTCTAGTGCATGTTAAGC----CAACCAATTCTAATTTGGTTCTT----------------TAATCTATAGACTGCATAAGAAATTTTCAG chr4 + 94230402 52998913 52998912 52999276 52998913 52998912 52999276 364 GCATCAATACAGAATAATCACTAGGTAGTCATTCTGGAAACATCCACATCACAGGGCCCTCAGTGAAAGCATAGGAGAGAGAGACaataaataaataatttaaaaaGGCCAAACCATTAGTTTTTCCATAGATGCTATTCTAAGAGTTTGAGGTAAG---------GTGCTTATTGAAAACAAGGCTTCTGAGCTCATTGATTGTTTCTTGCTTGCAGAAAATCCCAACTTAGGGCTCCCATTGATTTATGTCACATTTAAAAG-CTTGGTTCTCTTGAGTTATTCCACCATACTTCAAGCAAAGCAATTAATTCTTGTGTGTTTTCTTTTTTTTTTTAAATAATAACTTACCTCCTGCATAGAAAGTTTCTGG ..x.x:.x.::......x..:.x.x....:..:x...:..x.x.:.:x.:-.xxxx.:.....:--...xxx.::...:x...:.x.-:...:xx.x:.:......x-------------:....:..x...x:...x.x.x.x...x.:.:x....---------......x:x....:..:xx..x.::.:...............:...::::...x.....::.x.x..x::x.:...............xx........-.::::.....:...:......:.x:::.:x.:....----...::......x:.x..x..::.----------------...::..:xxx.......::..:...:::. 50M1I13M2I21M1I19M13I37M9D98M1D36M4I23M16I30M 209/327 63.9% 364/94230402 0.0% 47/327 14.4% 13815082 NA +11055 chr4 + 190214555 66821983 66821982 66822237 255 AATAATCATTTGCTTTTATTCAACTAAAAATTTCCCTTTTAAAAAT--ATTCATTATCCTAGAAAAATCAATTGACATTTGACAGAGGCTTATTTACAAAAATTTAACTCAGTAGCAATGTAATTTAGAAGCTGGCCACTGGGCGTAC-CTAGTAATAAATCAAATCCATGTTTTATTCAAACTC--AGACAAAAACATTACATTTAAATAA---CAATATTGTAATAACATGACAAAGACCAAGGTGTCCAATGTTAAAGCT chr4 + 94230402 53003842 53003841 53004104 53003842 53003841 53004104 263 AAAAATCATTTGCTGTTAGTCAACCAAAGCTGTCTTTTCTCTCTCTCTATTGATTACTCCTGAATAATCAATCGACATTTGGCACAGTCTTATTTATAATAATTCAAGTCAGCAGCAACATAATTTAGAAACTGGCTACTAGGCATGTGTTGGTAATGAATCGAATCCATGGATAATTCAAATTCATAGACTAAAAAATTACATTTAAATAATGTTAAGGTTGCGACAACCTGACAAAAGACTGCAAATTCAATGTGAAAACT ..x...........x...x.....:...:x.x..::..:.xxxxx.--...x....::.:x...x.......:........:..x..x........:..x....:..x....:.....::..........:.....:...:...:.::-:.:.....:....:........xx.x.......:..--....x....x...............---:..x:...::.:...x.......::x.x:x:x:.:......x...:.. 46M2I100M1I36M2I25M3I48M 188/255 73.7% 263/94230402 0.0% 8/255 3.1% 13818141 NA +3340 chr4 + 190214555 66835049 66835048 66835184 136 TTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTTTTGACAGAGCCTCACTCTG chr4 + 94230402 90152551 90152550 90152685 90152551 90152550 90152685 135 TTCATTTCCCTTTTTACTTTCCCTGATTCCTTTTGCCCCCCAAGTAGGTTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTC-CTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ..:x...:....::.x.:....:.xx......::x:...:.xxx.xxx.:..:..xx...::x..:.:::.....xxx::x..::..::.:....-.....:.x:...:...:.....x..x::.:::.....x.. 95M1D40M 79/135 58.5% 135/94230402 0.0% 1/135 0.7% -23317502 -70912900 +3038 chr4 + 190214555 66844463 66844462 66844513 51 TTCTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 51335344 51335343 51335394 51335344 51335343 51335394 51 TTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAA .....x....:.....x......:.........::..:...::.:...::. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 15509119 NA +13701 chr4 + 190214555 66845770 66845769 66846149 380 AATATACAGAGATGTCGCTTTAATGGTGCCATCATTATTGGAGC-----TGTCCTCT-----------------ACACAGAAATTT-TAGCCACTAGTAGTAAATGACAGATGTGTTAATTAAGAGACTGAGGCAAAGCCAAGGTTGATGTTCTAATAAACAGGTCATTAACTTTGGTAATGACCAATTTGAGAAGATGATTGTTATTACAAACTATATTCCATGAGTTAT-GAGAGCAACAGTATTACTTTGAAGTACATCTAATGGTCAGA---TGATAATGGGAAGTATTCTAAAACAATGGATATTTCTCA-TATGTCACCTTGCCTATTTATCACTTTACACATTTGCAAAACGTGATTT----------TATATAAAGCAAAACTCATTAAATGCTTAATTAGATTCAAAAA chr4 + 94230402 53013044 53013043 53013460 53013044 53013043 53013460 417 AAAATGTAGAGATACCACCTTAAATATGCCTTAGCTAGTAAAGCAACCCTATCCTCTTCCCCTGAAACCCACACATGCACAAATTCATGGCTACCAGCAGTTAATGACAGATTTGTTAATTAACAGCATGAGGCAAAGCCAAGGTTGATGTTCTAATAAACAGGTCATTAACTTTGGTAATGACCAATTTGGGAAGATGATTGCTCTTACAAACTGTATTCCACGGCTTATAAAAAGCAACAGTGCAGCTCTGAAATACAGCTGGCAGCCAAGACTTTAGCAGAGCAGTTGGTCTGAAACACTGTCCATTCCCCAGGAAGTAATCTTCCCCATTTTTCAGCAGACACAATGTGAAACCGGGAATCAGAATAGATGTATTTCAAGCTACAGCAATTAAA-ATTCATACAGATGTAAAAA ..x..::......::.:.:....xx:....x.x::..x.::...-----.:......-----------------.::..x.....:-.:..:..:..:...x..........x..........x..xx...............................................................:...........:.x.........:.......:.:x....-:.:.........::x:..:....:....x..::::.:..::---.x.xx.x:.x.:x.:x...:.....x..xx:...:.:..-x.x..x.:...x..:....x...x:xx.....x.xxx...x..x..x.:----------...x.x....x.x.x:x......-::.:.xx:....x:..... 44M5I8M17I12M1I144M1I41M3I39M1I49M10I23M1D19M 274/379 72.3% 417/94230402 0.0% 39/379 10.3% 13832726 NA +8422 chr4 + 190214555 66880223 66880222 66880571 349 ATATATGTGTGAAGGCTGACCAACTGTTCACTACTTCACTT------------AGGACAGGCTGGGTCAAAACTATGATAATTGATAGATACAGGATGAGGCTGCATACCTAATGGAAATGTTAAGCACAAAGCAAATTCTGTCAACATAAATGATTGGTTCTTTAAATGGCAGC-ACAGTTTAAGGATGACATACTGAATCAATCCCTAACTAATTGAAAAATTAATTAGTGCCTGTCACTTTAACTCTGAGTATTT--TTAAGCTTGAGTGTGAATATAGTTAACCAGCTTCC-TGCAAGAAGCCAGTTTGAAAATGCAGTGCAACTGTTGCCTAAATT---TTTCACAAGAAAAGATATCATCCT chr4 + 94230402 53020701 53020700 53021058 53020701 53020700 53021058 358 ATGGACGTGGGAAGGCTGAAGGACTG--CACTTGTACACTTTTTGTCAGGTGAGAGATGGTTGAGGGCCAGGCCTGGATGATCGATAGATCAAGG--GAGGCTGTATGCTTAATGGAAATGTTGAACCAAACATTACTTCTGTCAAGATAAGTAATTGGTTGGTTTAATGGCAACAAAAATTTTAAGATG---TTGTGAATCGATACCTCACTAATTGTTAAATTAATTGCTGTCTGTCATCATCTTCCAAAGTACTTGCTGGAGTTTGTATGTTACAAAAGTTATCCAGCTGCCTTGCTAGTACATAG---GCAAATTTCATCCCACTTTTGTCCATTTTTAATTTCACGAATGAGGAAGCAACCCT ..:x.:...x.........xx:....--....xx.x.....------------::..::.x:x:..x.x.::.:xx...:..:.......xx...--.......:..:.:.............:.:.xx..x::x.x.........x....:.:.......xx..x.......:.-.x.:...x.:....---.xx......:..x...x........xx.........:x..:......::x.xx::.x:....:..--.x:..:...x:...x.xx.x.....x......x..-...x..x.xx:..---.x....x:x:.x.x...x...:.:.xx..---......:.:x:.:..x::x.:... 26M2D13M12I42M2D78M1I14M3D65M2I35M1I13M3D29M3I24M 229/339 67.6% 358/94230402 0.0% 29/339 8.6% 13859522 NA +3004 chr4 + 190214555 66887806 66887805 66887840 35 CAACAACAACAACAACAAAAAAATTAAAATGAATT chr4 + 94230402 60531198 60531197 60531232 60531198 60531197 60531232 35 CAACAACAACAACAACAAAAAAATTGAAATGAACT .........................:.......:. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 6356608 NA +8216 chr4 + 190214555 66929776 66929775 66930063 288 CAATTGGCCCTCTGAGTTTAAGACATTCATGTCTTGAATTTTAATTCCAATTTTACAGCTTGCAAGCTAATGCCATAATGGACATGTTTTCCTCTCTATTTAGAAGGGAGGAGGAAAGGGAAAACTACATATGGCATCACTGGAAACAAGCCAAGTGGCA--GGGTGCTGGGGAAGGAATTGGCAGCCACACCATCTGAGAGATCAAACTGGCGACAACTTTTGTTGCATTTCAAA---AATAAGATGTGGCATAGTATGACAAGTACAAACTTTTTA-ACAAAAGCAGTGAAA chr4 + 94230402 53035692 53035691 53035968 53035692 53035691 53035968 277 CAGGTGGCTTTTGTAGGTAGAGATGGCTGTGTCTTGAATGCTAATTTCAATTTTACAGCCTACAACTGAATGCCAGAACAGACCTGTTTTCTTTTCTCCTTAGTAAG---------AGGGAAAACTACACATGCTATTGCTGGAAACAGGCCAAGCAGCACCAAGTGTGCAGCAGGTAACTGGCAGCAAAGCAACTGGAGCCCTAACGCAGGAGACAACTTTCATGCTCTTTCGGAGCGAGCAAGG--------ATTATGCCAAGCCCTAATGTTCCGTACAAAGGAAATGAAA ..:x....::.:xx..x.x:...::x:::..........x:.....:............:.:...x:x.......x..::...x.......:.:...x:....x.:.---------.............:...x:..::.........:......::...--::...:xx:.x.:.x..:.......x.x:.x.::x...xxx.x.x:.x..x.........::.xx:x....::.---.::...:--------.x....x....:x.x..:x..:::-.....:.x.:..... 107M9D44M2I74M3I7M8D24M1I15M 180/271 66.4% 277/94230402 0.0% 23/271 8.5% 13894084 NA +4112 chr4 + 190214555 66933120 66933119 66933204 85 CATGGTGGTGCACACCTGTAGTCCTAGCTACTCAAAAGTTTAAGACACGCGGATTGCTTGAGCCCAGGAGTTCTGGGCTGCAGGA chr4 + 94230402 76033197 76033196 76033279 76033197 76033196 76033279 83 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA ..::.........:--......:.:.......::....x:.:..x.x:.:.:.x::.....:.....:..:.:.......:..:. 14M2D69M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% -9100077 -85130325 +3403 chr4 + 190214555 66933782 66933781 66933860 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGCAGGTGGAGGATGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x::........::.x..x.xx:..x..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -9099419 -85130983 +3304 chr4 + 190214555 66936742 66936741 66936941 200 TGGTGCGTGCCTATAGTCTCAGCTACTTGGGAAGCTGAGCCAGAAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCATGCCAC-------TGCACTCT-AGCCTGGG--CAACAGAGCAA-TACAAAAAATTGAGGGCAATAAG--TGTC--AAAATAGGTGATGGACCAGATAGTT-GATCTATTACTTTAGGAAGTAAAA chr4 + 94230402 76033202 76033201 76033405 76033202 76033201 76033405 204 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGACAGCGGGTCTGATAGTTAGGTCT----TGTTAGGGAATAGAA ......::.--.:....::..........::.:........xx:x...x.:........::.:..x:xx:..:..:..------:.x..x......x-------..::.:..-......xx--..:..x:.::.-.:..:.:.::.x:...:x.:...--....--.::.x..:::::..::.x.......-.:...----:x.....:.:..:.. 9M2D67M6D13M7I8M1I8M2I11M1I23M2I4M2I25M1I5M4D15M 123/188 65.4% 204/94230402 0.0% 28/188 14.9% -9096460 -85133942 +15534 chr4 + 190214555 66949980 66949979 66950495 516 ATGTTATTTGGGCAACAAAGAAAAAATGACTGCATTTGCCAACAACCA-AGAATAATTTCACTG--GGAATTCTCTACTTCATATTTTCTCTTGAGATTTTT--AATAGGCTTTTAAAGAAGATTCTGAGCTGGGAACTAATCCAAGAAATAAAGA---AAGC------CAAGGGGAAAA----AGTAATAATAATAGACAGTTGTACTTGATTGTTTCCATGGTCAGGGCCTCCTCCTGAGTGACAGATAATTCATCTTCTGTC-AGTTTCCATTGCCTAGAGATCATTCTAAGTATTGTTATCAGCAAAACCTCCATAAAATGAAGGATTTTCAAACAGGAAACCAGATGTGATGGGGTCAGGCCCTGCATGTGATGGGGATATTTGGGTTAATGATGACTGATGCCATATCACATTTCATAAAGTACACACTTGCCAAATCAGGTATTTTTCCCGTCACATA-----------GGAGCAGTTGCTAAGTTCCTTTATGGTAAAGCACCAAGGTGAATGAGGAAGGAGTGAACACAAAAGAAAG chr4 + 94230402 53037350 53037349 53037878 53037350 53037349 53037878 529 ATTTAATTTGAGAAACAAAGAGAACAACCCCACTTTTACAAATAGCTGTAAAATCGTGTGGTTGCAGGACTCAGGTGCTTCTCAT---CTCTAGAGTGTTCTCCAAAAGGCTGAGAGAGCAGAT-----GCTGTTAAATGATTTGAAAACCAAACACACAAGCGTGGGGTGGGGGGAAAACAGGACTAATCAAACCCTAAGAATGCGCTTGATGGTTTCCGCAGCCAGGGCATCTCTCTGAGTGACAGACAATTCATCTTTTTTCCAGCTCCCATTGCCTAGAGATCAGTCTTTTGCTTGTTTTCTGCTAAACCTACATAAACCAAAGTATTTTCAAGCAGGAAACCAGATGCGATGGGGCCTGCCCCAGCCCGTTACAGGGACATGGGAGTTAATTATGATTGATGCCATATCACTCTTCATAAAGCACCCACTTGCCACATCAGGTGTTTTTACTGTCATTTGTGGAATGATGTGGGGGAGATGCCA---------GCAGTCAAGGTCTGGGGTCAAGGAGAAAGGGACAGAAGCATGAAATAG ..x.x.....:.x........:..x.xxx.::.x...:.x..:.:.::-.:...x:.x.x::..--...x.:xxx.:....x:..---....x...xx..:.--..x.....xxx.:..x....-----....xx..x.:..:::.:..x:...x.---....------:::........----.x....x.x.x:xx.x::x..::......x......:::.:......x..:::............:..........:.x..-..:.:.................x...xxxxx.....x..x..x......x......x::...x........:..............:.......:.x.x...x..x:..x.::....:..xx.:......x....:..............x:.........:..x.........x.......:.....x.:....:x.:-----------..:.x..x...:.---------:::..x...xx.:::...x..x...:....:::::.x:..x:.:.x.. 48M1I15M2I19M3D14M2I20M5D27M3I4M6I11M4I81M1I199M11I13M9D48M 346/499 69.3% 529/94230402 0.0% 47/499 9.4% 13912630 NA +3011 chr4 + 190214555 66955409 66955408 66955452 44 ATATATATATATATATATATATATATATATGGAAAGTAAGAACC chr4 + 94230402 42290368 42290367 42290411 42290368 42290367 42290411 44 ATATACATATATGTATATATTTATCTACATGGAAAATAAAAACC .....:......:.......x...x..:.......:...:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 24665041 NA +3555 chr4 + 190214555 66960437 66960436 66960509 73 TGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGTCAGGAGAATCACTTGAACCCGGGAGGAGAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::........:.xx.x...x...........:.:..xxxx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -9072768 -85157634 +13445 chr4 + 190214555 66974437 66974436 66974960 524 TGAACTTTGAGCTAATTTTTCAGGGAGGAAGATCATTCTTAATCATTTCTATTTGTCACTTGAAGATATTTCTAAAATAAAATTGTCAAAACTAAAGCATGAAATAAATATCAGCACATCACCTAGTGAAAAATAT----------AATAAACAACTTTCCAATTAGTTGTAGAGGTATTCAGGAATGAATTATCCTCTGCTTTCAGGT-TTCATGAATAATTCAAATTCCA--GTGTCAGTCGACCTAATTAGTAATTATACAAACTATTTCTGAATTATCTGGTTTGAAGCTACCTGTGTTACAGTTAGGTTTATTTCTGATATAATTATTAACCC-CATCCGAGT-TGGTCTTGTCTCTTTTTCTGTTTCTGGTAATGGAACAGGCATCTCCAGAATGCAGAAAAACCTGCAGATTCAGTTTATTAATGTACCATTACCAATTAGTCCCTCTAGTG-CCAAGAACTGACAGCATATACCATACAAGGAAATATTTTAAGCACT-TAGAAATGTCTGTCTTACATTCTACTGATTTAAC chr4 + 94230402 53038945 53038944 53039447 53038945 53038944 53039447 503 TGATCCTCTAGCTAACTTTTCAAG------------TCTTTTTCCCCTATCTTTGCAGCCATGGTGTTCCTCGGTGGTGAAATGATCAACGCTGAAAGGAGGGATCATCTTCAGCAGATCATCTGGGTGTGTGTGTGGGGGGGGGAAATAAACAACTTTCACATTAGTTGCAGAGAAGTGCACAAATGAATTACCCGCTGTTTTCAGCCAGTCATGAATAATTCAAATTCCCCTGTGTCAGTGGATCTAATTAGTAATCATCCAAACTATTCTTAAATTATCTAGTTTGGAGTTACTTGCATAGCAACGACATTCATTTCCGATAGGATTATTAATCCACTTGCCAGTGTGAGATTGCC-------------------AGGGCAGAGG------CAGTGGGAAGCCATACCATCAG-TTAACGTTATTAATGTTTCTTTAACAATTAACCTACCCAGTGTTCAGGGACAAACAGCATATGTCATGCAGAGAGATATTTTTAAAGCTCTGTGGATACGTGCCATACATCCTGCTGATTCGGC ...x.:.:x......:......:.------------....xx..x::.x.x....:x:.:xx::x:.x::..x:x::.:....x:....x:..:..:x:x.::..x.x:x......x....:..:.xx:x:x:.:.----------..............xx........:....:x:.x..x:.........:..x...:......x:-x....................x--........x..:............:..x.........::.:........:.....:..:...:..::.x:..::x.x:..:.....:....x:........:..-.x.x.x...-..:xx...:.-------------------.x..x.x...------...x:x.x..xx.x...xx...-..x.xx..........x:.x...x......::.:x:.:....-:..:.:..x:.........::...:..::..:.......x.:x:..-.:x::..::x..:.x.....:..:......:::. 24M12D100M10I63M1I22M2I104M1I9M1I10M19D10M6D22M1D42M1I46M1I34M 326/486 67.1% 503/94230402 0.0% 55/486 11.3% 13935492 NA +3143 chr4 + 190214555 66982658 66982657 66982724 67 ATGCAACAGCATCAACATCAAAAAACAAAAAACAAAACAAACAAACAAACAAAAAGACCACACAAAA chr4 + 94230402 75561876 75561875 75561941 75561876 75561875 75561941 66 ATGTAACATTTTCTCTGTTAAAAAA-AAGAAAGAAAACAAACAAACAAACAAAATACCCACACACAA ...:....x:x..xx::.:......-..:...x.....................x:x.......x.. 25M1D41M 51/66 77.3% 66/94230402 0.0% 1/66 1.5% -8579218 -85651184 +3165 chr4 + 190214555 66982662 66982661 66982712 51 AACAGCATCAACATCAAAAAACAAAAAACAAAACAAACAAACAAACAAAAA chr4 + 94230402 57454514 57454513 57454564 57454514 57454513 57454564 51 AACAGCGACAACAACAAAAATCAACCAACCAACCAAACAAACAAACAAAAA ......:x.....x......x...xx...x..x.................. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 9528148 NA +3032 chr4 + 190214555 66982670 66982669 66982716 47 CAACATCAAAAAACAAAAAACAAAACAAACAAACAAACAAAAAGACC chr4 + 94230402 33446097 33446096 33446143 33446097 33446096 33446143 47 CAACATTGTAAAAACAAAAATAAAACAAACAAACAAACAAAAAACCC ......::x....xx.....:......................:x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 33536573 NA +3208 chr4 + 190214555 66982684 66982683 66982727 44 AAAAAACAAAACAAACAAACAAACAAAAAGACCACACAAAAACT chr4 + 94230402 22392456 22392455 22392499 22392456 22392455 22392499 44 AAAAAACAAAACAAACAAACAAAAAAAAAAACCACCAAAAAATT .......................x.....:.....xx.....:. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 44590228 NA +3275 chr4 + 190214555 66984024 66984023 66984086 63 ATTTACAAA----GCAAATGAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGGGGTTGCA chr4 + 94230402 66803505 66803504 66803569 66803505 66803504 66803569 65 ATTTAAAAATATTGCAGAT--AAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTA .....x...----...:..--......:.:...:.........:..:..:.............x.:. 9M4I6M2D46M 51/61 83.6% 65/94230402 0.0% 6/61 9.8% 180519 NA +3859 chr4 + 190214555 67034394 67034393 67034476 83 CATAATGGCATGCACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:...--.....x......:...........::........x.xx.x...x::.......:...:..x.xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -8998803 -85231599 +3661 chr4 + 190214555 67036360 67036359 67036442 83 CATAGTGGCATGCACCTGTGGTCCCAGCTCCTTGAGGGGCTGAGGCAGGAGGATCCCTTGAGTTCAGGAGGTCAGGGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--.....x...:..:......x.....::.......x.xx.x.:.x.x.....:::...:..x.:x.......:. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -8996837 -85233565 +17904 chr4 + 190214555 67047638 67047637 67047934 297 TTCTTTTGCAGGAAGTCTTATCTGAGTTAATCTATT-----ACCTTATATATTACTAC-GACCATAACTCAGATAAAGCATAACACATTTTCATTTTGTCACTCCATTATTTTTGCAGTAAGTCAATATAATCTGAGATGAAGCATGCCTTGCTCAGCATTTATTGATCTGCCGGTTTGCTCATTGTTTACATCAAAATACCACTTGTCAGTTCTGGCCCTATTATAATTATCTTCTCATATGGGAAATGACAGCTTCAAAGCCCAAGTATGAGTCAATTTCTAAGATGAGTTACTCTCAAGA chr4 + 94230402 53046842 53046841 53047144 53046842 53046841 53047144 303 TTTTTCAACAGCGAGTCCCATCTGAGTTAATATATTGTGTTATATTATATATAACCACTGACCATAACTCAGATAGAACACAACACATTTTCATTTTGTTGCCCCATTATTTTTGCAGTAAGTCGATACGATATGAGGCGAAGCGTGCCTGGCTCAGCACTTATTGATCTGTCTGTTTGCTCATTGCTTACATCAAAACACCACTTGTCAGCTCTGGCTCTGTTATGATTATCTTATCATGCAGGAAACGACAGCCTCAAAGACTAAATGCTAGTCACCATCCAAGGTCAGGTGATAGCAAAA ..:..:x:...x:....::............x....-----.:x........x..:..-................:.:..:..................::.:.....................:...::..x....::.....:.....x........:...........:.x............:...........:............:......:..:....:........x....:::.....:......:......x.:..:.::x.....x:x..:...:.x..x.:x.xx...:. 36M5I17M1I244M 237/297 79.8% 303/94230402 0.0% 6/297 2.0% 14000796 NA +15390 chr4 + 190214555 67076848 67076847 67077170 323 TTTTTTAAACTTCTGAATTGCTTTCTGCATCTAGAATGCTATCTAAATCCCTGCTGATTTATCCTT-------ATACTTTCAGCAGGATTTCATTGCTCCTGGGCACCAGACAGTCTTGTTAATAATGGCAAATCCTTTCAGTCCCTCTTTGGTGCAAGGTGGGCTTTGATTGACAAGGTAATAAAAGTGTTAATGAGACAGAGTGGCACAGTCAGAGATCAATAGTTGCCAATAACAAAAACAATACTGATACTCAG-TTTGTAAAATTCCCTTAAACCAGATAAAAATATTTTGCATCAAAATAGAGACTTTTCATTTTATAATTGATG chr4 + 94230402 53054097 53054096 53054420 53054097 53054096 53054420 324 TTTTTTTTTCCTCTGAATCAGTCTCCAGA-CTGAAATGCTACTGAAATCTCAGCAGACTTCTCCCTCCCCCAAGTGGTTTCAGCTGT-TTTTATTGCTCTGAGGCACCAGACAGTTTTGTTAATAACGGTAAATCCTTTTAGCCTCTGGTTAGCACAGGTTGTGCTGTGATTGACAAGGTAATAAAAGTGTTAATGAGAGAAACTGGCACAGTCAGAGATCAATAGTTGCCAATAAGAAAAACAATTCTGATACTTAATTTTGTAGAATTCCCCCAAAGCGGTTGAAAATA-----CATCACAATCAGTCTATTTTATTGTTTAATAGATG ......xxx.:.......::x.:..::x.-..::.......::x.....:.x..x..:..x...:.-------:.:x.......x.x-...:.......:x:.............:..........:..:.........:..:.:..xx..:.::..:.x..x...x................................x.:.x................................x.........x........:.:-......:.......::...x.:.x.:......-----.....x...x::xx:x...:...x.x....x.... 29M1D36M7I14M1D170M1I32M5D35M 244/316 77.2% 324/94230402 0.0% 15/316 4.7% 14022751 NA +16255 chr4 + 190214555 67091578 67091577 67092072 495 AGATTTCATTCCACATTGGACTAATGGTAAATA-----------CTTTCACTACTTTGCTTCCTAAAAAAAAAAATGTGATTAACTTTGATGGAAACAATGAATGTTCAACCCTGGAGCAATGTCCACTTTCCATTCTTTCTATGAGAATTGTTGGAATGAAGGAAAAGAAATAGCCCAGGAGCCTTTTA-AGCATCCTTATTTTTCTCTGTCACAACATTAAAGGTTCAATGAATCTCCAATTAAGTCTCCCTGGCTGCTGTCACCAATTTGATTGATAGATGTCCTTGGCTCACCCTCCACAGGACATGCCAGTACACCAGGCCCCC---ACCTGCCACCATCAATTATCACTCTCTTGTCATCAGTGCCCTCACTTGTCAATTTATTTGCCACAAATCCAGTGAAGCCTTCTAATCAGGAAAAAAAAAGAAAAGCCATTCTTCTTTACTTTTAATGGTGGAATAGGAAAAAAAAAAAAACT-TAACAAACCACATACTGTTTAATCTT chr4 + 94230402 53057282 53057281 53057765 53057282 53057281 53057765 484 AAATCCCTTTCTGTAGTGAAGCAATGAAATATATATATACACGTCTCCAAACACTTTGCTCCCTTTCAAAGCACA-GCGATTACCTCTTACAGATGCAATGACAAGAGGCGCCTTTGGCAATCCCACGGTCCCCTTCTCCTTCTGAAAACTGGCAGAACGAGGGGGAAAAAA-AGCCCAGAAGCCTTTTTTAGCCTCCTTATTTTTCTTTGTCACATCATTAAAGGTTCAATGAATCTCCAATTAAATTTCCCTGGCTGCTGTCACCATTTTGATTGATGGGTGTCCTTGGATCAACCTCAGTAGGGCATGTTGTTGCAACGAGCCCCCCTTCCCCCTCACCACCCAATATCAGCCCCTTGTCGTCATTACCTTCACATGTCAGTTCATTTACTGCAAAAACAGTGTCACCAACTAATAGGGGCAATAGAAAAA--------------CATTTGTAAC-----------AAATAAGGAAAAACTCTAATAAATCAAGTTATGCTTCACTTT .:..::.x...:::.x..:.x:....:x.x...-----------..::x.x:........:...xxx...:x.x.-.:.....x..:.x.::..x:......xx:xxx:xx...xx:.....x:.xxxx.:..x....:::.x...:..:..x::...:..:..::..:...-.......:........x-...x.............:.......x.............................:.:...................x..........:.:.........x...x....x::...:....:::x.:..x.::......---x..:x:.....:.x.x.....x:.:......:...x.:..:....x.....:..:....:.::....xx.....xx:..xx.....x:..:x..x.:..:..--------------:.:..x...:-----------...x..::.......-...:...:..x:.xx..:..x.::.. 33M11I31M1D96M1D17M1I138M3I102M14D10M11D15M1I26M 325/468 69.4% 484/94230402 0.0% 43/468 9.2% 14034296 NA +3179 chr4 + 190214555 67109749 67109748 67109816 68 GAAAGAAAAAAGGAAAAGAAAAGGAAAGGAAAGCAAAGAAAAGAAAAGAAAGAGAGAGAGAGAGAAAG chr4 + 94230402 61411080 61411079 61411147 61411080 61411079 61411147 68 GAAACTCAAAGGACAGAGAAAAGAAAAACAAAGCAAAGGAAAGAACATAAAAAGCAGGAGAGAGGGGG ....xxx...:.:x.:.......:...:x.........:......x.x...:..x::.......:::. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 5698669 NA +3377 chr4 + 190214555 67109752 67109751 67109919 168 AGAAAAAAGGAAAAGAAAAGGAAAGGAAAGCAAAGAAAAGAAAAGAAAGAGAGAGAGAGAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAGAGAGGAAGAGAGGGAGGGAGGGAGGAAGGAAGGGA chr4 + 94230402 89498600 89498599 89498757 89498600 89498599 89498757 158 AGAATCTAGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAA----------AAAGAAGATAGGTAGAGGAAAGATTAATTAGAGTCTTACAGAGGAGAACAAAGAGCAAGGATGTGA ....xxx...........x....:....x:x...x:x.:..::.xx....::::x.:.:..x..:x.:.:.::..:x::.x...x.......----------......::x.:.x::.:......xx:.xx....xxxx.x.....::::x.::...x.....x.x.. 92M10D66M 94/158 59.5% 158/94230402 0.0% 10/158 6.3% -22388848 -71841554 +4421 chr4 + 190214555 67109753 67109752 67109958 206 GAAAAAAGGAAAAGAAAAGGAAAGGAAAGCAAAGAAAAGAAAAGAAAG-AGAGAGAGAGAGAAA------GGAAGA--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA-----AGAAAGAAAAGAGAGGAAGAGAGGGAGGGAGGGAGGAAGGAAGGGAGAAGGAGAGAAAGAGAGAAAGGAAAGAAGAAAGAAGAGA chr4 + 94230402 65771126 65771125 65771340 65771126 65771125 65771340 215 GAAAAAGGCAGAGGAACAGG----GTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATA-ATAAAGTCAGTAAAAAAAAAATGA ......:.x.:.:...x...----.x..::.....x.::..x.xx.:.-..:.xx..x:.....------:.....--:.:....:.....:.:x..:.:...:.:..:x.x.:...xx.:::.......-----...:x.....x...x.xx::....:......:..:x...x....::x.x:..:..x..x.-.x....xx.:x..:...:..:x.. 20M4D24M1I15M6I6M2I52M5I60M1D24M 131/201 65.2% 215/94230402 0.0% 19/201 9.5% 1338627 NA +3601 chr4 + 190214555 67109757 67109756 67109895 139 AAAGGAAAAGAAAAGGAAAGGAAAGCAAAGAAAAGAAAAGAAAGAGAGAGAGAGAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAGAAAGAAAGAAAGAAAAGA----GAGGAAGAGA chr4 + 94230402 84536568 84536567 84536704 84536568 84536567 84536704 137 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAG-------AGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGA ..:.....:.:....:...::.x.:....:.x.:...:x...::.:.:..:..:..::..-------..:.....:xx.x.x.:x...:xx..x.:x-:...x.xxx..........x.:.x....::..----.......... 60M7D30M1I32M4I10M 87/132 65.9% 137/94230402 0.0% 12/132 9.1% -17426811 -76803591 +3227 chr4 + 190214555 67109776 67109775 67109862 87 GGAAAGCAAAGAAAA--GAAAAGAAAGAGAGAGAGAGAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 58935721 58935720 58935809 58935721 58935720 58935809 89 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGA ....x.x:.......--.x:.xx..:..:.:.x::....:......:.x.......x..:::.::......x..x.x...::.:..... 15M2I72M 59/87 67.8% 89/94230402 0.0% 2/87 2.3% 8174055 NA +3099 chr4 + 190214555 67109783 67109782 67109846 64 AAAGAAAAGAAAAGAAAGAGAGAGAGAGAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 24148911 24148910 24148974 24148911 24148910 24148974 64 AAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGA ..:.....:....:.............:.:...xx.xx:x:x..:x.:......:...:..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 42960872 NA +3825 chr4 + 190214555 67109803 67109802 67109962 160 AGAGAGAGAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGA-AAGAAAAGAGA---GGAAGAGAGGGAGGGAGGGAGGAAGGAAGGGAGAAGGAGAGAAAGAGAGAAAGGAAAGAAGAAAGAAGAGAGAAA chr4 + 94230402 2498506 2498505 2498657 2498506 2498505 2498657 152 AGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGA------------AAGCAAAGCAGAAAGAAATGAGAAA .....x:.....:....x..x:.::..x::x:.x.:x..x...x:x:::...x:.::..x..x.:.x:xx:...-...::.:....---........xxxxx::......:.........:......------------...x....x........:x...... 74M1I11M3I38M12D25M 97/148 65.5% 152/94230402 0.0% 16/148 10.8% 64611297 NA +3147 chr4 + 190214555 67109917 67109916 67109967 51 GGAGAAGGAGAGAAAGAGAGAAAGGAAAGAAGAAAGAAGAGAGAAAGAAAA chr4 + 94230402 5537931 5537930 5537981 5537931 5537930 5537981 51 GGTGAGGAGGAGAGTGAGAGAAGGGAAAGAAAAAAGAACAGAAAAAAAAAA ..x..:.::....:x.......:........:......x...:...:.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 61571986 NA +3659 chr4 + 190214555 67109918 67109917 67110046 129 GAGAAGGAGAGAAAGAGAGAAAGGAAAGAAG--AAAGAAGAGAGAAAGAAAAAAAGCAGACAGAAAGAGAGAAATAAAGAAAGAAAGAAAAGTAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAAGTA chr4 + 94230402 70762131 70762130 70762259 70762131 70762130 70762259 129 GGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGA--AGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAGGCATTAAAAAGCA .:.:....:.x..x:.:.....:x.......--.....x.:x...:.xxxx.:..::...--::..:.:x...x.....:.x:.x.xx.x:x.:........:...:....:......:x.xx......:. 31M2I27M2D69M 83/127 65.4% 129/94230402 0.0% 4/127 3.1% -3652213 -90578189 +3111 chr4 + 190214555 67109933 67109932 67109980 48 AGAGAAAGGAAAGAAGAAAGAAGAGAGAAAGAAAAAAAGCAGACAGAA chr4 + 94230402 24326925 24326924 24326972 24326925 24326924 24326972 48 AGAAGTAGGTAAGAGGAAAAAAGAGAGAGAAAAAAAAAGCAGACATAA ...::x...x....:....:........:.:..............x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 42783008 NA +3256 chr4 + 190214555 67109971 67109970 67110051 81 GCAGACAGAAAGAGAGAAATAAAGAAAGAAAGAAAAGTAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAAGTATAAAG chr4 + 94230402 75241505 75241504 75241584 75241505 75241504 75241584 80 GTAGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAG-AAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGG .:......:..:x::...x..x...x..........:x:...-........:..x..:.xx...:..::x...::....:. 42M1D38M 56/80 70.0% 80/94230402 0.0% 1/80 1.2% -8131534 -86098868 +3149 chr4 + 190214555 67109978 67109977 67110055 78 GAAAGAGAGAAATAAAGAAAGAAAGAAAAGTAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAAGTATAAAGATCT chr4 + 94230402 59222797 59222796 59222874 59222797 59222796 59222874 78 GAAACAGTAAACTAAGCAAAGGAGGAAATGGAGGGAAAAAAAAGAAGAAGAAAAAAAAAAGATATCAAGCAAATATCT ....x..x:..x...:x....:.:....x.x.::.....:...::.:........:......x.xx:x::...x.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 7887181 NA +3293 chr4 + 190214555 67112862 67112861 67112925 64 AAAACAAAAAAAGAAAAAAGAAAGAAATGAAGAGATAAATATATTGAAGATAGATATGAAAAGA chr4 + 94230402 5781986 5781985 5782049 5781986 5781985 5782049 64 AAAGTGACAAAAGAAAGGAGACAGAAATGAAAAAATAGGTATGTTAGAAAAAAATATGAGAAAA ...:::.x........::...x.........:.:...::...:..::.:.x.:......:..:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 61330876 NA +3068 chr4 + 190214555 67135614 67135613 67135664 51 TGATTTTTTCTTTTCTTTTTTTTTTTTTTTTTTGACTAATAGTACTCTATG chr4 + 94230402 56311877 56311876 56311927 56311877 56311876 56311927 51 TGATTTCTTCTGTTCTTTTTTTTTTTTTTTTCTGAGGAAATGTAGTCTGTG ......:....x...................:...xx..xx...x...:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 10823737 NA +4008 chr4 + 190214555 67170068 67170067 67170150 83 CGTGGTGGTGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCAATTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..........--......:...........::........x.xx.x...x..x..........:..x:xx:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -8863129 -85367273 +3346 chr4 + 190214555 67171782 67171781 67171860 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTTAGGCAGGAGAATTGCTTGAATCCAGGACTCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::.....x..x.xx.x...x::......:....:.x::xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -8861419 -85368983 +6243 chr4 + 190214555 67194265 67194264 67194431 167 ATAAATAATAATATGTTTTTTAAAATGTATGACTATTCATTAAACCATTGACCACTTCCAGCCTATTAA--GTATGTAAGTATTTTAAAAATTACTTTAATACATATTTACCCAATAGACCAGAAAAGTTC-CTTTGGTCCACG-ATGTGCATT-TTAAAAGCTGCCTACAC chr4 + 94230402 53065724 53065723 53065888 53065724 53065723 53065888 165 ATAAATAAGTGTATGCATTAAAAAATA-------ATGCATGGTTGGACTGACCCTTTCCAGCTCATTGGCTGCATGGAAGTACTTTGAAAATTACTTTAATACATATTTACCCAATGAACCAGAATGATTCACTTTGTCACATGAATATGCCTTATTAGAAGCTGCTTACAC ........xx:....:x..xx.....:-------..x...x:xxxx.:.....x:.......::...::--.:...x.....:...:.............................::.......x::...-.....x:x..:.-..:...x..-...:.......:..... 27M7D35M2I60M1I12M1I9M1I17M 121/160 75.6% 165/94230402 0.0% 12/160 7.5% 14128541 NA +3530 chr4 + 190214555 67206720 67206719 67206802 83 CATGGTGGCATGCACCTGTAATCCTAGCTGCTCAGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGTGGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.:....:..::::........x.xx.x...x.x...........:..x.xx...:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -8826477 -85403925 +3017 chr4 + 190214555 67216253 67216252 67216372 120 TCCAGAAAAAAAAAAAAAAAGGAGTGGGGGGGAAGAAAGAGCAAAAGAAAGAGGAAAGGAAAGGAAAGAAAGAGCAAAAGAAAGGAAAGGGAAGGGAAGGGAATGGAAGGGAAGAGAAGG chr4 + 94230402 59467941 59467940 59468060 59467941 59467940 59468060 120 TTCAGCAAAGTAAAGAGAAGAGACATGGGAGCAAAAAACTCAAGGAGAATGAAGAGAGGAGAGGAGAGAGAGAAGTGAGGAAGTGAGTTAGGCAGCAGCAAGATGGAGGCAGGGAGGAGG .:...x...:x...:.:..::..xxx...:.x..:...xxxx.::....x..:..:....:....:...:...:xx:.:...:x..:xx:.:x:.x.:x:::.....:.x:::...:... 120M 68/120 56.7% 120/94230402 0.0% 0/120 0.0% 7748312 NA +3429 chr4 + 190214555 67216449 67216448 67216605 157 GGGGGAGGGGAAAGGAGGGGGGGAGGGGAAGGGAGGGAAGGGAGGGGAA-------GGGAGGGAAAGGAAAATTAGCTGGGAG---------CAGCGGCATGAACTTGTAGTCCCAGCTACTTGCCAGGGTGAGGCAGGAGGATCACTTGAGCCCAAGAGGTGGAGGATGCAG chr4 + 94230402 76033109 76033108 76033277 76033109 76033108 76033277 169 GAGGAAGTAGACTGAAAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCA--TGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:..x:..xx.:.:.:..:.:.x:.....x..x:...:xx:....x-------....::.x.x.x..x:.:.--..::..---------...:..--..x..x......:...........xx...x....x.xx.x.:.x.......:....::..x.xx:..x..:.. 49M7I19M2D6M9I6M2D73M 100/153 65.4% 169/94230402 0.0% 20/153 13.1% -8816660 -85413742 +3390 chr4 + 190214555 67216461 67216460 67216516 56 AGGAGGGGGGGAGGGGAAGGGAGGGAAGGGAGGGGAAGGGAGGGAAAGGAAAATTA chr4 + 94230402 84535565 84535564 84535620 84535565 84535564 84535620 56 AGAAATGGGGGGGGGGGAGGGGGGGAGGGGTGGGCAAGGCAGAGAAAGAAGAATTA ..:.:x.....:....:....:....:...x...x....x..:.....:.:..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -17319104 -76911298 +10250 chr4 + 190214555 67223983 67223982 67224175 193 AGAAAAAAACTATAATTCTAGAGCTGATAAGAATTGGACAGATTTAGTGATACTCAATCCAGCTTAAAATAAAGTTGCTGTCCTGTCCTTTCCTGTGGCTTATGTCTCTGACAGCAAACATAATTAAAGCTACAGAGAGAGAAATCACCAGTTGTTCTGAATCAGTGAGACTCGACAACCAAGAAAATAATGC chr4 + 94230402 53070367 53070366 53070557 53070367 53070366 53070557 191 AGGGGAAAGCCAT--TTCCAAAGCTGAAAGGGATTCAGGAGATTTAGCTACAGCCTACCCAGCTTAAAATAAAGTTACAGCCCCGTCCTTTCCAGTGGCTCATGTCTCTGACAGCAAATGTCATTAAAGCCATATGGAGAGACATCGCTGCTTGTTCTGAATTGCTGAAACTTGACGACTGAGAAAATGACGC ..:::...:.:..--...:.:......x.:.:...x::x........:x.:.x:.x.:..................:.x.:..:.........x......:.................::.x........:.:.x:......x...:.::x...........::x...:...:...:..::.......:.:.. 13M2D178M 142/191 74.3% 191/94230402 0.0% 2/191 1.0% 14153616 NA +3508 chr4 + 190214555 67231658 67231657 67231740 83 CATGGTGGTGCACACCTGTAGTCCCACCTACTTGGGAGGCTAAGGTTGGAGGATTGCTTAAGCCCAGGAGGTTGAAGCTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:...x.......::.....:..x::x.x.:.x::...:.:.....:..x..x::.....:. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -8801539 -85428863 +8615 chr4 + 190214555 67232604 67232603 67232848 245 AAATACTTGTGCTATGCTCTGCATCTTAGACTCCCTTGAAATAAAGCAGCCATAATCCCCACGACAGTTGCCACCATTAATGCTGATCATAAATGCTGGTAAAGAGGCAGAGATGCTGATTTACCACACGTTGCTATGCTTGTGTGTCCTTTTTCTAATAAAAATGAGGGGAATTATTACTTT--CTGAAAGTTGAGCCCCTCAACATTTGTATCACGAACCTCCTCTACCGGGAGATTTCACTGCT chr4 + 94230402 53073502 53073501 53073743 53073502 53073501 53073743 242 AACTGCTTGTATTTGACTATGCCTTATAAAGACAGTTGAAATAAAGCAGTTATGATCTTTGTGACAGTCACGACTGCTAATGGCTACCATAAAACCCAGTAAAGAGGCAGATAAGTTGATTTATCATGCATAGCTGCTCCCATATATCTACTTTCTAATAAAAATCTGTGGAATGATTGCTTGCACTGAGCTTTGTGCACCC--ATATTTGTATTGCTAACCTCTCCT---GGAAGATTTCAAAGCT ..x.:.....::.xx:..x...x.:x..:.xx.xx..............::..:...:::::......::.x..:::.....x:x.:......xx.::.............x.x.:.......:..::.:.x...::x.:::.:.:..:x:..............xx.x.....x...:...x--....:xx...x..x..:--.:........::.x......::..---..:........xx... 183M2I17M2D24M3D16M 162/240 67.5% 242/94230402 0.0% 7/240 2.9% 14159102 NA +3262 chr4 + 190214555 67301264 67301263 67301368 105 CAGGAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATGTATATATATCAGGGTTATCAGAGAACAAAGATGGTCTACTTTTGCTTTCCAC chr4 + 94230402 51472497 51472496 51472600 51472497 51472496 51472600 104 CAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAAATTGCTCT-CTATTGTTCTCAAC ..::::......:x.......:.......x.:.:.......:x..:.:.....x:x.x.x:.x.::.xx:.:x:.:......:x..x...-..x...:.:..x.. 90M1D14M 67/104 64.4% 104/94230402 0.0% 1/104 1.0% 15828767 NA +3377 chr4 + 190214555 67308136 67308135 67308236 101 GATACTGGGCACATTTCTTAACCTCTCTATACCCCAGTTTCTTCATCTGTAATGTGGGGATAAGTATAG-AATCTACCACA------TAATGTAAGTTTAAATGAGTT chr4 + 94230402 83501141 83501140 83501248 83501141 83501140 83501248 108 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATT ..:x.......x...x........x.x.:.:..:......:::..:......x:...:.x.:.xx:..:-x.:.....x..------..x...:..x:.....x.:.. 69M1I11M6I21M 70/101 69.3% 108/94230402 0.0% 7/101 6.9% -16193005 -78037397 +3228 chr4 + 190214555 67319340 67319339 67319426 87 TCTATCTATCTATCTATCTGTGTGTGTGTGTGTGTATATATATATTTATGTATGTGTGTATATATTTGTGTGTGTGTATATATATAT chr4 + 94230402 85834531 85834530 85834615 85834531 85834530 85834615 85 TTTATTCATTTGT--GTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:...::..:.:.--:.....................xx..:..xx:..::..:...:x...:..x.x.:..:::::...:.:.:.. 13M2D72M 56/85 65.9% 85/94230402 0.0% 2/85 2.4% -18515191 -75715211 +3773 chr4 + 190214555 67348384 67348383 67348475 92 GTGCACCTGTAGTTTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGACGGAGATTGCAGTGAGCCAAAATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x.......:..........::........x.xx.x...x.:........::.:..x:xx:.::..:..------..x..x...... 74M6D12M 63/86 73.3% 86/94230402 0.0% 6/86 7.0% -8684820 -85545582 +4389 chr4 + 190214555 67348552 67348551 67348657 106 GAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGAAA-------------GAAAGGAAGGAAGGAAGGGA---GGGAGAGAGAAAGAAAGAAA chr4 + 94230402 1500700 1500699 1500821 1500700 1500699 1500821 122 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaa .:.....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:.....-------------..::....x:........:.---..:.:.:.:........... 66M13I20M3I20M 74/106 69.8% 122/94230402 0.0% 16/106 15.1% 65847852 NA +3165 chr4 + 190214555 67348589 67348588 67348656 68 AGGAAGGAAGGAAGGAAGGAAAGAAGAAAGAAAGGAAGGAAGGAAGGGAGGGAGAGAGAAAGAAAGAA chr4 + 94230402 84536568 84536567 84536635 84536568 84536567 84536635 68 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAA .:.::::.:....:...::...x..x...:.x......x:.:...:::.....:..:..:..:..... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -17187979 -77042423 +3295 chr4 + 190214555 67354735 67354734 67354792 58 AATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGACACACATGCGTATGCACATGGAA chr4 + 94230402 79265515 79265514 79265572 79265515 79265514 79265572 58 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAA ..:x.............::........xx....x.:...:.::...:......:.x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -11910780 -82319622 +3051 chr4 + 190214555 67354738 67354737 67354789 52 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGACACACATGCGTATGCACATG chr4 + 94230402 85834543 85834542 85834594 85834543 85834542 85834594 52 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATG ...x.................:.xx:.....:..:....::...x::..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -18479805 -75750597 +6584 chr4 + 190214555 67365652 67365651 67365813 162 AGGCAGGTCTTCTTTTACAAGCAACAGTAAAAAATTTTTGAG----CAGCTAAGCATGTTACCAGGGAATTAATAATAAATCTGTACAGATTGATATTCCCCTGAGAT------AAAACGAAAGAGAAAATATTAAAAAACTGATGCTTCTGGCAAATGAAAAACTAATGGA chr4 + 94230402 53083370 53083369 53083536 53083370 53083369 53083536 167 AGGCAGACCTACTTTTGCTACTGACATTGAGA--TTTTTGAGAAAACACCTGAGAAT--TGCCATAGAATTAATAATAGATCTATGCAGAGTGAAATTCCCAGGAGATTAAGAAAAAAAAAAAAGAAAAATACT-AAAAACTGACATTCCCAGCAAATGAAAAACTAACGGA ......::..x.....:.x.x::...x.:.:.--........----..x..:..x..--.:...x:............:....:.:....x...x......xx.....------....x:...:::......:.-.........:::.:.::................:... 32M2D8M4I11M2D49M6I20M1D37M 120/157 76.4% 167/94230402 0.0% 15/157 9.6% 14282282 NA +3579 chr4 + 190214555 67366925 67366924 67367036 112 AAAGAGCCAGACGTGGTGGCATGCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGAAGGAGAGTCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033186 76033185 76033289 76033186 76033185 76033289 104 AAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:::x.x..:::....--....:x....:.:...........::........xxxx.x..:x..........::.:..x:xx:..:..:..------..x...:..... 19M2D73M6D12M 71/104 68.3% 104/94230402 0.0% 8/104 7.7% -8666261 -85564141 +10098 chr4 + 190214555 67368013 67368012 67368345 333 GGTGCAGCACTACCCATCCAATCATCCCGTAGCACTGCCCTTGACAGGCCAATGACAAGA---CCATTCTCCCATCTCACTTGTAGGTT---TCCCTTTTCAGCACATTTCCCCCCTGCCAGGCATCATAATTAGTGCTTCTCTGTGGGCTTAATTGTACATTTGTTTTGATTAATTAGCCTCAGAGCTGACTTGGCAGTTATTGAGACATTGGAGAGGGTTCTGGATTTATTTAGTGTTCATACCTCTGCACCCTCTGGGACTCTTCTTTCTGTCAGCAGCAAAACTTCAAGTTCAAAACTGTCTGTTTTAGAAAATGTTTTATGTGTCCAATTAACT chr4 + 94230402 53090631 53090630 53090946 53090631 53090630 53090946 316 GATGCAGAAAGGCCTCTGCAATTATCACTTA--ATTGTCCTTCATGGGCCAATACTGGGAGTCTCATACTTTCCCCTTA-----AGGTTGATCCCTCCTTCAGCAC---TTCTTCTTAACCGGCTACTTAATTAGTCTTCCTTCCTGGACTTAATTGTAAATTTGTTTTGATTAATTAGCCTCAGAGCTGACTTGGCGCTTACTGAAATACAGGA-ATAGTGCTTAGTTTCTTCAGCTTATAGCCTACTGCACCCTATGGGAGCCCCTGCTTTGTCAGCATTAAAATTTCAAGTTCAGA--------TTGTGGAAAAACTTTTTCAT----AATTAGCT .:.....x.xx:..:x.x....:...x.x..--.:..:....x.::.......:x:::..---:...x..::.x:..:.-----.....---:..:::........---.:.::.:.:x.x...xx.x........x:.:..::x...:..........x.....................................:x...:...:.:.:x...-.x:..x..x::...x..:..:x.x:.xx.:x.........x.....x:.:::x:.:........x:....:..........:.--------..x.:.....xx....x::.----.....:.. 31M2D27M3I16M5D5M3I14M3D106M1D83M8D20M4D8M 216/310 69.7% 316/94230402 0.0% 29/310 9.4% 14277382 NA +3167 chr4 + 190214555 67385563 67385562 67385633 71 AGCAATCA-GACAAGAGAAAGAAAAGGAAAAGAAAGAAAAAGGAAGGGGAGGGGGAGGGGAGGGGGGAAGGA chr4 + 94230402 15856696 15856695 15856767 15856696 15856695 15856767 72 AGGAATCAAGACATGATAAAGAAAAAGAAAAGAAAGAAAAACGAGACAGCACTGGAGGGAAAGAAGAAAAGA ..x.....-....x..x........:...............x..::x:.x:xx......:.:.::.:..:.. 8M1I63M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% 51528867 NA +3013 chr4 + 190214555 67385571 67385570 67385626 56 GACAAGAGAAAGAAAAGGAAAAGAAAGAAAAAGGAAGGGGAGGGGGAGGGGAGGGG chr4 + 94230402 58942179 58942178 58942234 58942179 58942178 58942234 56 GATAATAGCAGGAAAAAGAAAAGTGAGGAAAAGGAAGGGAAAGGAGCATGGAAGGG ..:..x..x.:.....:......x:..:...........:.:..:.x:x...:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 8443392 NA +3512 chr4 + 190214555 67385578 67385577 67385660 83 GAAAGAAAAGGAAAAG---AAAGAAAAAGGAAGGG-GAGGGGGAGGGGAGGGGGGAAGGAGGGGGAGGGGAGGGGAGGGGAGGGGAG chr4 + 94230402 73744699 73744698 73744785 73744699 73744698 73744785 87 GAAATTAAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAG ....xx....x.x...---..:.......:.....-:.....:.:.:..:::...:.::......:...x:...x.....x..::.. 16M3I16M1I51M 60/83 72.3% 87/94230402 0.0% 4/83 4.8% -6359121 -87871281 +3052 chr4 + 190214555 67385612 67385611 67385675 64 GGGGGAGGGGAGGGGGGAAGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGAAG chr4 + 94230402 62860354 62860353 62860417 62860354 62860353 62860417 64 GGGTGTGGGGCGGGGGGAAGGAAGAAGAGAGAAAGGGGGGGGTGAGGTACGGATGGCGGGGCAG ...x.x....x...........:.::...:.:.:...:....x.:..x:x...x..x:...x.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 4525258 NA +3061 chr4 + 190214555 67406147 67406146 67406215 69 CTTTTTTTCTTTTATTTTTTTCTTTCTTTTTTCTTTTCTTTTTGGAGACAGGATCTCCCTCTGTTACCC chr4 + 94230402 32310639 32310638 32310707 32310639 32310638 32310707 69 CTTTGATTCTATTTTTTTTTCCCTCCATTTTTCTTTTTCTTTTGGAGACATTTTTTTTTTCTCTTCTCC ....xx....x..x......:.:.:.x..........::...........xxx.:.:::...x..x:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 35095508 NA +3015 chr4 + 190214555 67408891 67408890 67408936 46 CTCTCCTTTTCTTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 50052662 50052661 50052707 50052662 50052661 50052707 46 CTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTT .......::....x:x...:.x........:............... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 17356229 NA +3351 chr4 + 190214555 67408891 67408890 67408954 64 CTCTCCTTTTCTTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTGGAGATGGAGTCTCACTC chr4 + 94230402 56907965 56907964 56908028 56907965 56907964 56908028 64 CTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTC ..:....::..:x.:..:...:..................:.......x:.x..xx.:..x:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 10500926 NA +3033 chr4 + 190214555 67428083 67428082 67428145 63 GCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAGTGGGAGTAAATCAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ..:.x:....:....xx.x.........::.:...............x:.:.:..:.x.x:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -20954625 -73275777 +4996 chr4 + 190214555 67429592 67429591 67429754 163 AGGGGAAAGTGAGAA-------------CGCAGTCTCTCACTATCACCAATTATGCAGTTGAGTTTCCCACATTTGGGGAAATCGCAGGGGTCAGCACATCCTGAGTTTAATGGATAAACCTCACCCTGGGAAAACCACCTTTGTGATCATGGTATTTCCTCTGCCAGCTAAGTAT chr4 + 94230402 81180083 81180082 81180228 81180083 81180082 81180228 146 agggaaaaaaaagaaaaaaCACCCACACCCCAGTTCCCCACTACCAC---------AGTCAAATCTCTTGCATTTGGGGAAATCACAGGAGTAAACATACCTAGAGTGCAGGGGATGAGCCTCAC---------------------ATCATGGTGTCTCCCCTGCCAAGCAAGTAT ....:...:x:....-------------.x....::.:.....:...---------...::.:.:..:::..............:....:..x.:..:.:.:x....x:.:x....:.:......---------------------........:.:...:......:x:...... 15M13I19M9D69M21D30M 97/133 72.9% 146/94230402 0.0% 43/133 32.3% -13750491 -80479911 +3086 chr4 + 190214555 67442688 67442687 67442744 57 TGTATATATACATACACATATATGTGTACATATATGTGTATGTATACACACATACAC chr4 + 94230402 47135177 47135176 47135233 47135177 47135176 47135233 57 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACAC ...:.....:.........:x..xx..x:..:..::.......:.::.....:.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 20307511 NA +17389 chr4 + 190214555 67446196 67446195 67446582 387 TTTATGAAACAAATCTTCAATCAAGTATAACATTTTGATGCTTGGCATCTAGACTCCCTTGTGCCCTCACTATGCCAGCGGCGACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACTTGGATGAAGAGATGAAGAAAATTCGTCAGGTTATCCGAAAATATAATTACGTTGCTATGG-------ACAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTTTCCAGCTGTGGTTGCAAAACCCATTGGAGAATTCAGGAGCAATGCTGATTATCAATACCAACTATTGCGGTGTAATGTAGACTTGTTAAAGATAATTCAGCTAGGGCTGACATTTATGAATGAGCAAGGAGAATACCCTCCAGGAACTTCAACTTGGCAGTTTAATTTTAAATTTAATTTGATGTAAGT chr4 + 94230402 64995734 64995733 64996399 64995734 64995733 64996399 666 TTTATGAAACCGATCCTCAGTCAAGTGTAAC-TTTTGATGTATGGTCTTTAAAGCCCCC--------CACTATGCCAGCAGCTACCGTAGACCATAGCCAAAGAATCTGTGAGGTCTGGGCTTGTAACTTGGATGAAGAGATGAAGAAAATTCGTCAAGTTATACGGAAGTATAACTATGTAGCTATGGTAAGTAAACACTTGATGTTTATCTCAAAAGTTCTTGTAAAAAAGCGTGATGATCTTTTCTGATGTCAGTGAACTTGACGCTAGTAAAAGTGTTCTTCCACTTTTATTGGAGTGGAAATCTTAATGCATAAGTGTTAAGACCCCCATCTGTTACCACTTTAAAGCTGTGTTTGCACATGGTTTTCTTTAGCTATGGAATTTTTTGATACTTGAGATGTTTGATTAAAAACAGGAAGTGTGAAGTTCTATAGGTGTCTCCTACTGAAGTTTTGCTTCTCTCTTTACAGGATACAGAATTTCCAGGAGTAGTTGCAAGGCCTATTGGAGAATTCAGAAGCAATGCAGACTATCAATACCAATTATTACGCTGCAATGTAGATTTGCTAAAAATAATTCAGCTAGGACTGACGTTTATGAATGAGCAAGGGGAATACCCTCCAGGAACTTCAACTTGGCAATTCAATTTTAAATTTAATTTAACGTGAGT ..........x:...:...:......:....-........:x...:x.:..:.x:...:--------............:..x..:.....:..............:.....:..:........:................................:.....x..:..:.....:..:..x.......-------....-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..:.......xx..:.......::..:..............:........x..:............:....:..x..:........:...:....:..............:.....:.................:.............................:..:.................:.:..:... 31M1D27M8D122M7I4M281I194M 324/378 85.7% 666/94230402 0.0% 297/378 78.6% 2450462 NA +3300 chr4 + 190214555 67458301 67458300 67458385 85 ATGAATCAA----TCCCTTATAATAAATATCTCTCTCTCTCTCTCTCTCTCTGTATACACACACACACACACACACACACACACACACA chr4 + 94230402 60831506 60831505 60831593 60831506 60831505 60831593 88 atgattcaacagttcccataca-TATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA ....x....----....x..:.-..xx.......x.............x.x.:....:::::.:........:.....x:x:.x.:... 9M4I9M1D66M 62/84 73.8% 88/94230402 0.0% 5/84 6.0% 6626795 NA +3767 chr4 + 190214555 67458319 67458318 67458378 60 ATAAATATCTCTCTCTCTCTCTCTCTCTCTGTATACACACACACACACACACACACACAC chr4 + 94230402 60831523 60831522 60831582 60831523 60831522 60831582 60 atacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x......x.....x...............:..:.:.:::::.:........:..... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 6626796 NA +3942 chr4 + 190214555 67472597 67472596 67472696 100 TTGATCTTTCATCTTTTTATCTGAGTAAAAAGAAGAACACTTTCCTCATTCCGGAGATTTTTGATGTTATAATAGTTACCTAAAAGTAAAGTGATAAGAA chr4 + 94230402 53097340 53097339 53097438 53097340 53097339 53097438 99 TTCACCTGTCAT-TTTTGAGTTGTGTGAAATGAAGAACACTTTCCTCATTCAGAAGATTACGTATGTTATATCCATTTCCTATAAATAAAAACAGAAAAA ..x.:..x....-....x.x:..x..:...x....................x.:.....x:xx........x:x:..x....x..:....:xx.x..:.. 12M1D87M 72/99 72.7% 99/94230402 0.0% 1/99 1.0% 14375257 NA +3523 chr4 + 190214555 67483234 67483233 67483300 67 TGTAATCCCAGCTACTTGAGAGGCTGAGGCACGAGAATTGCTTGAACCCGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:............:........x.x:.x...x::.........:.:..x:xx:.....:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -8549977 -85680425 +3090 chr4 + 190214555 67491450 67491449 67491492 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 40485454 NA +6221 chr4 + 190214555 67493875 67493874 67493991 117 AAGTTTTACCTGATGGCCTTCCTTGATAATCTATTCGCTCTCCTCGCCAGTACTCCAAAGGTTTCAAACGTGTTCTCTTGGTCCTGCGAACATTTGGTGTGTTGGAGGGCAATACTA chr4 + 94230402 53102714 53102713 53102830 53102714 53102713 53102830 117 AACTTGTACCTGAAGGCTTCAATGTATAGGTTACTCGCTCTCCTCGCCAATATTCCAGAGGTTTAAGTCGTATCCTTTTTGTCCGACGAACATTAGGCGTGTTGGAAGGCAGCACTA ..x..x.......x...:.:xx.xx...:x:..:...............:..:....:......x.:x...:.:..:..x....x:........x..:........:....::.... 117M 87/117 74.4% 117/94230402 0.0% 0/117 0.0% 14391161 NA +3445 chr4 + 190214555 67497238 67497237 67497320 83 CATGGTGGCACACGCCTGTAATCTCAGCTACTCAGGAGGTTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--....:.::........::::...:....x.xx.x...x.:..............x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -8535959 -85694443 +3433 chr4 + 190214555 67515337 67515336 67515408 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx:x...x.............:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -8517869 -85712533 +3746 chr4 + 190214555 67522860 67522859 67522946 87 CGCAGTGGTGTGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACTCAGGAGGCGGAGGTTGCAGTGCA chr4 + 94230402 76033197 76033196 76033281 76033197 76033196 76033281 85 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA .:........:::.--.:..:.:...........::........x.xx.x...x.........:...:..x:xx:..:..:..x:.. 14M2D71M 60/85 70.6% 85/94230402 0.0% 2/85 2.4% -8510337 -85720065 +3377 chr4 + 190214555 67534287 67534286 67534345 59 GCACCTGTAGTCCCAGCTGCTCGAGAGGCTGAGACAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:......:..:..:........x.xx.x...x::.........:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -8498919 -85731483 +3572 chr4 + 190214555 67540531 67540530 67540612 82 GTGGTGGCACACACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCACAAGAATCACTTGAACCTGGGAGGCAAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.:...........:.........x.x::x...x..........::.:..x:xx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% -8492670 -85737732 +3325 chr4 + 190214555 67558107 67558106 67558207 101 GAGGACACATTCAAAACATAGCA-----CTAAATATTCATTGGGAACTCATGTACTTGGAATATCTACTGGCAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAGAA chr4 + 94230402 88637371 88637370 88637476 88637371 88637370 88637476 106 GAAGTCAAGTTCAGCACTCAGCAGAGATCAAAATGTAAACCAAGAACTGTTACAATTGGAAAAGTTATTAGGAGAGAAGGAAAGACCAGAAAGAAAGAAAAAAGAA ..:.x..x:....:x..x:....-----.x....:.xx.::::.....xx.::.x......x.x:..:.:.x.:.:..::...:.xx................... 23M5I78M 67/101 66.3% 106/94230402 0.0% 5/101 5.0% -21079264 -73151138 +3318 chr4 + 190214555 67562075 67562074 67562186 112 AAAAAAAAAAAAAAAAAGAAAGAAAGAGAGAAAGAAAGAAAAGAAAAAGAAAGAAAATAAGAGATAGTTTGGGCAACGTCTCATAATTTCTTCAATCTGTGATGTGCTAAAG chr4 + 94230402 44890393 44890392 44890504 44890393 44890392 44890504 112 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGCTAAACCAAATAGTGCAATCCACTTCCTTGGATCTTTGAAAGGTGTGATATCATCAAG ..::...............:...:.....:::.....x.x.xx.........x:xx.x.xx.:.....x:::x.x..x..::xx:..:.:.xx..xx......:.xx.x... 112M 71/112 63.4% 112/94230402 0.0% 0/112 0.0% 22671682 NA +3108 chr4 + 190214555 67570704 67570703 67570777 74 GAAAGAGAAAGGAAGGAAGGAAGGAAGGGAGAAAGGAGGGAGGAAGAAAGGAGGGAGGGAGGAAGGAAATAAAA chr4 + 94230402 70338957 70338956 70339030 70338957 70338956 70339030 74 GAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAA ...:.:....::...:...:..x..::........::...:..x:.:::..:x..x...:x.::.::.:.:... 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% -2768253 -91462149 +3921 chr4 + 190214555 67571071 67571070 67571162 92 TTCTTTCCCACAGGAGTATGAGCATTACTGGACAGAGTTGAGAGGAACTACTCTTTTCTTTTATACCGACAAAAAGAGTATAATAGTAAGTA chr4 + 94230402 53120492 53120491 53120583 53120492 53120491 53120583 92 TCCTCTGTAACAGGAATTTAGACTGTTTTGGACAGAACTGAGAGGAACTATGCTCTTCTTTTATGATGATAAGAAGGCACCAACAGTAAGTA .:..:.x:x......:.x.:::.xx.x:........::............:x..:.........:x:..:..:...:xxx:..:........ 92M 62/92 67.4% 92/94230402 0.0% 0/92 0.0% 14450579 NA +3086 chr4 + 190214555 67577610 67577609 67577674 65 TGAAAATACATTCCAATTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGATGA chr4 + 94230402 34387706 34387705 34387770 34387706 34387705 34387770 65 TAAAAATAGGTTATAATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTTAAAGTAA .:......x:..x:.....x..:.x:.x::..x....:........:...........:.::.:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 33189904 NA +4951 chr4 + 190214555 67581285 67581284 67581491 207 ACTCTTTTAATTGGTTTCAGCTGTCAGTTCCCCAAAACGTGTCACTCCTACCTGGGCAAGTAATTAAACTGCATGAAGTCCTAGAGAGAGAAAAGAAAAGGAGGATTGAG---ACAGAGCAG---AGTACGTCCGTGGAAAAAGAGAAGGAACCAACTGAAGATTATGTGGATGTACTGAACCCTATGCCAGCGTAAGTGCACAATGAACTGC chr4 + 94230402 53123238 53123237 53123450 53123238 53123237 53123450 213 ACTATGTTGTTCATTTTCAGTTGTCAGTTCCACTGGATGAGTCGTTATCACTTGAACAACTTACAAGAATTCATGAAGTGCTAGATAAAGAAAAGAAAAGAAGGGTTATGCTTACTGACTGTTCCAGCACAACCCACAATAAAGAAAGCCTTTCCAGCAAGGACTACAGCAGTACAGTGACTGCTATGCCAGCGTAAGTTCTGACTGAAATAC ...x.x..:x.::x......:..........x.x::.:.x...::.x::..:..::...x.x.:x.:.x.x........x.....x.:............:...:..:x.---..x..x::x---..:..:x..xxx:.x.....:.:xxxx:.x.x::.:..:..::xx::.::.x...x:x................x.xx.x....x.:. 110M3I9M3I88M 127/207 61.4% 213/94230402 0.0% 6/207 2.9% 14458047 NA +7839 chr4 + 190214555 67583546 67583545 67583709 164 ATTCTGTTTTTT-TATCTCACCTCTGTAGATGTTTTTATACAGTGTCCCGGAAAGAGGCAACTGAGATGCTCCAGAAGAACCCTTCTTTGGGAAATATGATCCTGAGGCCTGGTAGTGACAGTAGAAACTACTCCATCACTATTCGGCAGGAGATAGAGTATGTT chr4 + 94230402 53124015 53124014 53124179 53124015 53124014 53124179 165 ATGCTGTTTCTCCTCTCCCTTCTATGCAGGTGCTTCTATGCAGTGTCTCGGAAAGAAGCAATAGAGATGTTAGAAAATAACCCTTTGTGTGGGAATTTGATCCTGCGTCCTGGCAGTGACAGCAAGAACTATGCAATCACTGTCCGACAGATGCTGGAGTAGGTT ..x......:.:-.x..:.x:..x..:..:..:..:...:.......:........:....:x......:.xx.:..x.......:x.xx..:...x........x.x.....:........:.::.....:x.x......:.:..:...:x.x.:.....x... 12M1I152M 119/164 72.6% 165/94230402 0.0% 1/164 0.6% 14459531 NA +3011 chr4 + 190214555 67588387 67588386 67588423 37 TTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTT chr4 + 94230402 5942459 5942458 5942495 5942459 5942458 5942495 37 TTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTGTTTT ...................x.x............... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 61645928 NA +3081 chr4 + 190214555 67588392 67588391 67588429 38 TTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTTTTTTGA chr4 + 94230402 44382713 44382712 44382750 44382713 44382712 44382750 38 TTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTTCCTGGA ................................::.x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 23205679 NA +10352 chr4 + 190214555 67618843 67618842 67619194 352 TCTTCAGTGCAGTTTCTTACTGATGTTTCCC---TTAAAATTAAGGCTT-----AATGAAAGAGAAATCCATAGTATTATGAACTGATTTTCTTTAGCTTCTGAAT-TAAGTGCACTCTTTCCAAAATCAAGTGGTCCTGGAGTAACGTTAAGACAACTTGTATTAATCAGTGTCATGACTGAAGTAGTATCTTACTGGAGGTCCCGGCAAATCTTCATCTCCATCAATGTCTGGAGCAAATGACACAGTAAGATCCACATATTTCTTTTCAGTAGTAGGTTTTACAAGTTTATGCATTCTAAGAAAAATAAGCAAGAATGAATACTTTGGTAAATTCTATAAAATGAAAAAATGATTTGC chr4 + 94230402 53129335 53129334 53129663 53129335 53129334 53129663 329 TCTTCAGCGCAAAGCC--ACTGACTTCCATCATTTTTTAATTAAGGCTTCACCAAAAAAAAAAAGAATATATAGTACCAT-----------CTTTAATAGCTGAAAATTAGCACACTCCTTTCAAAA-CAAATGGTCCTGGAGTGACTTCTGTATCTCTACCATCAATTGTCTTCCTGAACAAAGTAGTATCTCACAGGTGGCCCTGGCAAGTCTTCATCTCCATCAGTCTCTGGAGCAAATGATACTGTCAAGTCCACATACTTTTTGTCAGCTGATGGCTTCACAAGCTTTTGCATCCTACAAGGA------AATGAAGAACAGTT------------TAAGATAAGAGAAGGAATTGC .......:...:xx:.--.....:x.::x:.---..xx...........-----..x:...:.::...x:......::..-----------.....::xx.....x-.x..::.....:..:.....-...:............:..x.:x:x.:xx..xx:..:...::x:x..x...x::...........:..x..x..:..:.....:...............:.x..............:..x..x.::........:..:..x....:x.xx..:..:.....:..x.....:...x:.::.------..x:.x...:.x..------------...:..:.:.:..x..x.... 16M2D13M3I15M5I26M11D15M1I20M1D180M6D14M12D21M 225/320 70.3% 329/94230402 0.0% 41/320 12.8% 14489508 NA +9582 chr4 + 190214555 67622823 67622822 67624267 1445 ATACTTACGTTAACTTCAATCTTTTTGCATGACCAGGCATTACAGGAACATAAAGCATTTTGACTCCCTGTACCACCATTGTTGGCTCAATTCCATACTTCTCCTAAAAGTGA--ATATCCAAAAAAGAA-----ACAATG--AAAGCCTCGCTCAAACATAAAATGCTTATTTAACATT-----------------------------GTTCGTAAACAATG-------TTTTATGAC----CAGTAAAAAAAGCAAATTCA--------TGGTAAATAATT---------------------ATAACTTCCAATAAAATTA------------------------TAAATAA---------------AAACAAAACAGAAACCAGACATAAAGCTACTA-----------------ATGAACTAAATG-AACAAAAG-TATCTCACTTTGACTGCATTTATGAAATCCAAGAGGGTGAAATCTTCTTTTCCATGTACGGTCCATCGATCCCAAATTGTAAATGATATTCCATTTCTGTTACAGAAAAATA---------------TTCAGAACAGAAACATTGAAATTTTCTTCCTTTTAGTGATGACACACACACAAAAAAAAC----CCACTTTCAGAAGTCCATTATTTGTGATCAGGCTAGAAATTAATGTGGGGAAATAAAGGATAATATATCTTCTAAAATATTCCATAATCTTATTTCTTCATCACAT-CATATAGATAACCACTTTTAATCAGTACCTTGCTGATCCTTCCAGTGTATTATAAATCAGTATGTTTTAGCAAGA----CAGTGTTGTCTCTCTCTTTTTAAAATGGGTTTC--ACTGTGTGGATGTTCCAGTACCCCATTACTGGACACTTCGGTTATTCTAATCATTGGCCACGATAAATAAT--GCCAGAATAATTATCTTGCAAATATATAGTTTGAGACTTGTGCAAATGTATCTGAAATATAGTGCTATATATCCCTTACTGTGGATTATAGTATTTTGTACTCTCATTAGTAATGTATGAGAGTGTCTGCTTTCTCACACCCTTGTTAAGGTAGGTTTTTTTTCAAGTTTTTGGTTGTTGCCAATCTGAAAACTAAAAAGTACAGGCCCAGGAATTGTTCTGCTTTGTCTCAAGCTTGTGGAATTCTTCTAAATCTCATGACCTACAGTCAGACACCAGGGTACCTTCTAATTCATCTGGCAGACACAGATGA----AACCATAATGCCA--AATAATGTGGCAGATAAAGT---GCTGTAAGGGTTCTTTGGCTACTTTAGTCAGAAATATTTAATGAAGATGAGGTTTGAGCTGATCTTGAAG--------TGATGGCA--AAAATT----TACACATACACAATAGAAGAAAAAAGAG---GTGAAGCTAGTA----------TTTTTCCCTT--TTAAAAGGTAAAATATTTTATTTC------ATTCTCATTATACAAGAGAAATAGACTTTCATACATACCTGATTTTAGTTTTCCTTACTTCAGTTGTCTCTGTAAATACTACAATTGGAATGGCTAAGTTAAGAAAACAATTTTTGTAAGCTTCAAATGGATAGCCACCAGTTACTTTGATCATCTCCAAGGCAACCTAGATAAAAGAAG chr4 + 94230402 53132344 53132343 53133753 53132344 53132343 53133753 1410 ATACTTACGTCAGCTTTAATCTTTTAATGTGACCTGGCATCACAGGAACATACAGCATTTTGACTCCCTGTACAACCATAGTTGGTTCAATTCCATATTTCTCCTGGAATTCACAAAACACATTAAAGGACTGTGACGATGGCACAGACCAGCAGATACAACTGATGTTGATACTACATCTAATCACTAAAACCATACAAAATAAGCTAATGCGTGGACACTGATATAAGTTTTATCAATATACAATTGAACAAGTGGATTAACAAAGAATTTGAAAATAGATTGGGATGTGTTCTACTTAGACACAACCTCCATTAACATCAATTTTTTCTAGAATTATTCTTGTTTAAATAATAATTTGACAAATGCAAAAAAGCCAATAACCCCAAACAAGAAAACTCTTTACTTATCATCTTGCATTAACCCAGTGCAATAGATGATATCTTACTCTGACAGCATTTATGAAGTCCAGCAGAGTAAAATCCTCCTTTCCATAAATTGTCCACCTGTCCCAGATGGTAAATGATATCCCATTTCTGTTTAAAAAAAAAAAAGATTCTTTGTTACTTCAGAAGGCAAACTTGGGCA----CTCCCTTT--------AAATATATATCAAAGAATTGCTACCTCTTCCCGTGATTTGCTGTTTTATCTTA----------------------------------ATCTCTTCC------CTCCCTGCTGCCATTTCTCCAGCTCTTTCACCTGCCTAAGTGCA---AGACAAAACCTAACT------CCAAGTG------AACACAGTAT---TGGGCAATGAATTTACTGTTTTCACGCCTGCTGAAAAACAGGTTTTTTACTGACCACATGTTCCAGT---------CTGAGCACACAGGATGTTT---------------ATTAATAAGCAGGCGACACGTTTATCTC------ATCTAGCTT------------------TTTAGAGCCTAGCTACCAACAGCTTCCACTGAAAAC--------------------------------AAAACTAACTGCTT----AAAACC-------------------------------------ACTAATTTTAAAATTA----GGACAG----AAGAGTGTATCAGCTGCATTTCC-GAACAAGGAGTTCT---------------CAAGAGGTGCACTATGGGACACCCT----------TGGCAG-TACTGAGAATTTCAATTACACTGTTAGTAGTAA-ATGGCTAATGGAGCTTGACAGCAAGCACTAAGTGACCA-----ATCGTCAACCTTGAATATCCATAACATTTGACCAGAATTTGAATGTGAACTTTGATTCCACCATACTTCTGCTACACATGCACA-TACAATATTGATGTGATTGTGAATTTAATAACTGTACATATTTTGCACTTGTTTTAAGTGACAAATAGCACGTTTCCAGAATATTACCCTTCTACCA----------TCATCCTTCCTACCTGATTTCAGTTCTTCTTACTTTAGCAGTTTCTGTAAAGACCATTATGGGAATGGCTAGGTTCAGAAAACAGTTCTTGTAAGCATCCACTGGGTAGCCACCCACAACTTTGATGAGTTCCAGTGCAACCTGCAGTAAATAAG ..........:.:...:........x:::.....x.....:...........x....................x.....x.....:...........:.......::..x.x.--.x.:x..xx....:.-----..:...--.x..x.:x..xx.x...xxx:...:.x..x:x....:-----------------------------:.x...::...x..-------......x.x----..:.x:..x...:::...x.--------.x.x.....:x.---------------------.:...:....x...x..:.------------------------.......---------------...x..:x..:x....xx.x.:..::xx...x-----------------..x...:x.:..-..:.:.x.-.....:...:....x...........:....:x..:..:.....:..:.......:x.:x.....:.x:.....:..x...........:...........xx.:.....x.---------------.......x:x....x.x.:x.----..:.....--------.x.:.:.:.:x...:..x:----..x...:.x.x::.::::.:...xxxx.:.----------------------------------..x.....:------:...x.:x.x::......:..x.x.x.-..:x.:xx...x::.x---.:x..:x....x:..------:.x....------..xx......---.x:....x:----:.x....x..x.x.::x:.xx....::.....:--....xx::x..........---------...::...x:x..x.:..:---------------..x.....x--.x.::x.::x......:------..x...:..------------------.:.::.::x...:xx:xx.:.x.::::....x::.:--------------------------------:.:.x.:x......----.x.x..-------------------------------------:.:...:.x....:..----.x....----.:..:.xxx..x...x::.:..x-.xx::x...:....---------------.x.x..x::x..xx::..::...:.----------......-:..x..x:.----..::.:.x..::.--.:...-:....x:..::..:---:.x.:...x::.xxx..:.:.-----:..:xx..:x..x...:xxx..:.x:.....x.x..x:.....x--------....xx..--.x.x..----.......:....-..x..x.xx:.x.x.---.....x:..:..----------....x.x...--..x..:x.xx.....x:x::....------...x:.x..x...x.----------::x..x.x.x..........:....:.:.......:..:x..:........x..:.:x..x..........:...x........:..:........x..x.x...:........x::x........x.x:....:x.......:x.xx...x... 113M2I15M5I6M2I37M29I14M7I9M4I20M8I12M21I19M24I7M15I32M17I12M1I8M1I112M15I21M4D8M8D19M4I30M34D9M6D27M1I16M3D15M6D7M6D10M3D9M4I33M2I19M9D19M15D9M2I17M6D9M18D36M32D14M4D6M37D16M4D6M4D23M1D14M15D25M10D6M1D9M4I13M2I5M1D14M3I21M5D44M8I8M2I6M4I12M1D15M3I12M10I10M2I24M6I15M10D155M 799/1202 66.5% 1410/94230402 0.0% 451/1202 37.5% 14490479 NA +12336 chr4 + 190214555 67624958 67624957 67625190 233 AAAGGAGCATTTTTATT--------CAAGGAATAATAAACTTACCAAGCCAGAAACTGTAGCAGTGGTTGTTGCTATAGCAGGTATAATTTTACCAGCTATGCGCTTTGTTTTGAAACGGTCAGCTGGTTCAATGCTGTACATTTTGGCACGAAGATTTGATGCAGCTGTGATGAAATCTATGTGTCCATTATGATCATCATCTTTTTCAAATGAAAGCACTGCCATCTGAAGGTCACCTG chr4 + 94230402 53134890 53134889 53135124 53134890 53134889 53135124 235 AAAGAAACATTTTCACTATTTTTTACAAG------CATACTCACCAGCCCTGAAACTGCAGCAGTAGCTGTTGCAATTGCAGGAATAATCTTGCCAGCAATGCGCTTTGTTTTGAATCTATCTGCTGGTTCAATGTTGTACATCTTGGCTCGCAAGTTTGATGCTGCTGTTATGAAATCTATATGCCCGTTACTATCATCATCTTTTTCAAAGGAAATGGGCTTCATTTGTAAGTCATCTG ....:.:......:.:.--------....------:.x...:....:x..x.......:......:.:......x..x.....x.....:..:.....x.................x.x:..x............:.......:.....x..x.::........x.....x...........:..:..:...:x..................x....xx:x:x:...:..x.:....:... 17M8I4M6D206M 179/227 78.9% 235/94230402 0.0% 14/227 6.2% 14490068 NA +7501 chr4 + 190214555 67626355 67626354 67626489 135 CTTACTTTTGGTGGCTTCATTAGATAAAATAGCCTTTTCTAGTTGGAAAATTGCATTCCTCTCATCTTCACTGCTAATAGGAACATGGTCTGGTTTCCTTGCAGTTTCATCTGTTTGAACAACCTTTGAATATAT chr4 + 94230402 53136090 53136089 53136224 53136090 53136089 53136224 135 CTCACTTTGCAGAGCTTCATTGGACTGTATAGACTTCTCCAGCTGGAAAATAGCATTTCTTTCATCCTCACTGCTGACTGGGATATGATCTGGTTTTCTTGCAGTTTCATCAGTTTGTACAACCTGCAAGTGTGT ..:.....xx:x:........:..:x:x....x...:..:..:........x.....:..:.....:........:.:x..:.:...:........:..............x.....x.......x::.:.:.:. 135M 101/135 74.8% 135/94230402 0.0% 0/135 0.0% 14490265 NA +3065 chr4 + 190214555 67631096 67631095 67631157 62 TGCACCTGTAATCCCAGCTACTTGGGAAGCTGAGGTGCGAGGATTGCTTGAGCCTAGGAGTT chr4 + 94230402 76033205 76033204 76033266 76033205 76033204 76033266 62 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .....x....:.:...........::.:......x:x:.x.:.x::.....:..:..:..:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -8402109 -85828293 +9887 chr4 + 190214555 67631676 67631675 67631921 246 AAGGATACATAAAACTAAATATAAATACTTACAAAGGCTCATTTAAATCAAATTTTATTGGAGAGGGTGGCCTCTTTGGTGACTGCCAAAATAAACCTGGCAAAAAGATACAAATATCATTTTCAATGTATGTAGCCAGTAATAAATGTCATTAA-AATTTATTCTCAACA--------------TTTATACTTACTGCCATCTTTTAATCGTATGTCCAGAGGGAAACAGTGAAGAAGCTGAAGAGCCTAAAGAAAAAAA chr4 + 94230402 53139123 53139122 53139379 53139123 53139122 53139379 257 AAAGATGTTTTAAAATGCAGAGCAATACTTACAAAGGATCGTTAAAATCAAACTTCACTGGGAAAGGTGGCCTCTTTGGTGACTGCCAGAACAAACCTGGTTAGAAGACAGACTTAAGAT----GAAGTCCTAGAACAGCAACACATGACACAAGCCATGAATTCACAGGAGGCACACGGAGGTGTTTGTACTTACTTCCATCTTTTAATCGTGTATCAAGAGGAAACGAATGAAGAAGCTGAAGAGCCTAAAAGGAAAGA ..:...::x.x...x.:x.x.xx..............x..:..x........:..:.:...::.:.......................:..:........:x.:....:.x.xx..xx..----:.x..x:xx::x...:..:.x...x..:x.:-x..xx....x..:x.--------------...:........x...............:.:..x.....:..xx.:......................:::...:. 120M4D31M1I15M14I76M 176/242 72.7% 257/94230402 0.0% 19/242 7.9% 14492553 NA +3029 chr4 + 190214555 67633045 67633044 67633104 60 TTATTATTTCTATTTTACAGATGGGGAAACAGACATAAAATGTGATTATCAGATATGGGT chr4 + 94230402 83149351 83149350 83149406 83149351 83149350 83149406 56 TTATTATTTCCATTTTATAAATGGGGCAACTGAGATGATATGTGATT----GCTGTGGGT ..........:......:.:......x...x..x..:.x........----.x.:..... 47M4D9M 46/56 82.1% 56/94230402 0.0% 4/56 7.1% -15516306 -78714096 +16160 chr4 + 190214555 67633338 67633337 67634525 1188 TACTTACCTTATGGTTAAAATATTTTTCAAACTTTAATCTTGCTAATTCTACACACTGGGACCAATTTCTAGGTCTTCTGCTAAGTAACTTTATAACTTGAAAACAGCCTTCTAAACTGTGTCCACTCTGTATCTTCTAGAATGGGAGAGAAAAAAAAAATCAACATACTTCCAATTACAAACATATACACATCCCTCACCAAAAGTTAGCC--TAAGTTTGAAGTGTCAACTCATGTGTTTTATGCTTTTCTTTTTTCACCTCAAGCTCCTTTTCCCTTCCTTCTTCTTTAACCTTTCTTTTCTTTTCTGTTTGAGAAGGGGAATGGTAAGAGATAGCATACAAAATTTTAACTC-----TGATTTCTTATCTTACAAGTTATCCTCATATTTTCCTAGCTGTAAGTTATTAGTACTATAATATATGTACTCACTATAAGTGCTATGAATATTTGATACTAAAAAGTGGGCCTTGTTAGCAAAAGATTAAAAGAAAGTGAGAAAACATCTTTAAAGTTGCCTTCACTATAAGAGTAATAAGTCTTGGAGATTATTGTTCCCTCATGAAATTTTAACTAGAACTTACCTCAATTTTTTCTTTCCAAAGGGCTTA-----ATAAAAGCC-CTTTTATTATTTGTAGCCCTTCTATCATAATTATCATATCTTTATTAGCTCGCACCATAC-GAATTGCT--GTTTTGTGAGTCGAACATGCTC-AAATATCGACAATTCCATGTAGTTCAAACAACC---AAAATGATAATTTGTGACCTAATTTCAAGATTCCTTA-------TGTATCATTTCATTTTTTATATACAATCACTCTTTATGGAGGTAAAATAAATCACTTGTAGATGACTTGAAAATAAGATTACACTGACACAAAGTGTTAAGTTTGTA--TTAAAATTTACTGA---------TTTTTACCTGTAAGACTTCTTCTGCAGATGAATAGGTTTGCCAAAATTTGTTAAACAATGAAGGTTTGTGGGAAAAGGAACTTTCAAACTGTAACAGAGAAAAGAAAAAAAAAATTACAAATAGAAGTCTGTTTAAAGTCAGAAATATCTTCTTTCTCAC---TTCAAAGAAAATAAATTTAAAA----AGGAACTT------TTACCTTATCTCTTGCCCACTGTATGGTATGTTCAATAGCAGCTGGAAAGGATTTTAGAGTACAAAATGGTATTTCCTCTTCTGGGGGATCCCGCTAATTT chr4 + 94230402 53140195 53140194 53141193 53140195 53140194 53141193 999 TACCTACCTTGTGGCTAAAATACTTCTCAAACTTTACTCTTGCTAATTCCACACATTGAGTCCAATTTCGGGGTCTTCTGCTGAGTGTTTTAATAACATGAAAACAGCCTTCTAAACTCTCCCCTGATTTTATTCTCTAGA-------TACAAAAGAAAATAAACAAATATTTA---AAAAACA----------------AAAAAGTCAAACAGCAAGTATGA------------------------------------------------------------TCTTAGTAAG---------------CTGCAGGTAAAAGGAAATGG---AAGGTCGCTTTGTGAACATTAACTTGCATGTGATCCCTT-CCCTCCAGGTTTTCCACA--------GAGCTGTTGTCTACTTGTCCTAC----------CTCCACCTCGTCCGAATGACTATTAGCCATTATAGA----------------------CAAAAACAAGTAAG------TGTTTAA----GTCTGATCTATTAGGTAGACAA---------------GTTCACTCA--------AAAGTACATCTTCCCCTCATTTTTTCCCTGCTGACTGCACATCTGTATGACACTCACTGTTCTTGCTAACAACCCCTCTGT-----TTTTAGTTTCTGTATCA--------CGTACAGAATCCCTGAGCTAGAGAAACAGGCCATGCACGAGACTTCAGCTCTTACTGACAGCAGAAAGATCCTATGAAACATCAACAAATGACTTGGGCAAATAAGTCTTTAGAAAATCTGAACCAAGTCA-------------------------GAAAACAAACCAAACCGTACTTAACATAAATGGAAACAAAATC-------CTTAAAGCATT-AGTTCATACTCTGGATTTTATCCAGGCAACATTCTCCTACCTGTAGAACTTCTTCTGCAGATGGATAGGTCTGCCAAAACTTGTTAAACAATGAAGGCTTGTGAGAAAATAAACTTTCAAACT-------AGAAAATAAAAAGAACAATACGG---------TATTTAACAATAAGTACCTCAAATACCTCACCTTTTCAAACACAGTCATTTCAAAAGCCTGTGAACTTACTTCCTTACCTTATCTCTTGCCCACTGTATCGTATGTTCAATGGCAGCTGGGAAAGACTTCAAGGTGCAAAAAGGTATTTCCTCTTCTGGTGGATCCCGCTAGATT ...:......:...:.......:..:..........x............:.....:..:.x........x:...........:...:x:..x.....x....................x.x:..xxx:.x...::......-------x:x....:.....x....x.:x.::.---.x.....----------------x......:.:x.--:....x...------------------------------------------------------------....xx.x.:---------------...:xx.x:..:..:.....---:..:.x..x.xxx:..:x......:-----....::...-:.:.x..:...x...x..--------x......x:x:..:.x..x...:----------...xx:x.x:x:xxx....x....x.x:.:..x.:.----------------------:....:x....:..------.x.....----.:..xxx....x..:xx:.:..---------------....x....--------x..x..x.x...x..::x........::.x.x:.xx..x:.-----..:.x.x:.-..x..x..::.x::.:...:...:.-----..x.x:.x...x...:.--------.:...-....:x..--.:.xx:x:.::x.:x.....x.-.:.:x..::.xx..x.xx::..:xx...x.x..---:...::x:..:xx:....:.::x:xx.x:.x..:...-------..x.:..xx...-------------------------.:.:::...x:...:.::x:x..:xxx.xx..:...:..:..:-------.x:....::..-....::..--:.::.x....::x.---------:.::........::................:......:........:.................:.....:.....x:............-------......x.....:..x.x...::---------.:.....x:x:.::x.:x..xxx.x:.....---......x.x.:.x.x..:....----:x......------.........................x...........:........:..:..:..:.::..:.....x.................x...........:x.. 141M7D26M3D7M16D12M2I9M60D10M15D20M3D25M5I9M1D18M8D23M10D36M22D14M6D7M4D22M15D9M8D41M5I9M1I25M5D17M8D5M1I8M2I22M1I33M3I37M7I12M25D43M7D11M1D8M2I14M9I90M7D23M9D31M3I22M4I8M6I101M 648/948 68.4% 999/94230402 0.0% 291/948 30.7% 14493143 NA +7667 chr4 + 190214555 67635447 67635446 67635573 127 ACTTACATGACTATTGTAAGACTCAGTCAAATGCGGTACAATAACTTCAGTGTGTCCCTTAGTGCCCATTGTTCCAGAATCTAAAAGAGGCCTTAGATTTGCTAAGCAACGACT-ATTTGAAAAGACA chr4 + 94230402 53142068 53142067 53142195 53142068 53142067 53142195 128 ACTTACGTGACTATTATAGGACTCTGTCAGATGAGGCACAACAACTTCTGTGTGTCCTTTTGTTCCCATGGTTCCAGAGTCTATCAGAGGACGCAGATTTGCTACACAACGACTGATATGGAAAGACA ......:........:..:.....x....:...x..:....:......x........:..x..x.....x........:....xx.....x.x:..........x:........-..x..:....... 114M1I13M 104/127 81.9% 128/94230402 0.0% 1/127 0.8% 14493379 NA +10829 chr4 + 190214555 67638898 67638897 67639129 232 AAAACTAAAGACAATTCTGTAGGAACATGAATTTCAAGAACATACCTGTCTACGTATCTCCTGGCTTCCACATTATCTAATGCTGTAATAATTACATCTTGTTTAGTATAGAACTCATCATTGTAAATGGTCTCAGTGGTTGGACATACTTTGTTCAGGTGTGCATCTATCTTTATTTGAGAATTTATTTTCAGAGTAGCATCAGCAGCAGTGTAGCTTTTAGGTTTCTAAA chr4 + 94230402 53142811 53142810 53143031 53142811 53142810 53143031 221 AAGACTAAAAATAG------AAGAGCAGAGGTTC-----ACCTACCTATCAATGTATCTCCTTGCTTCCACATTGTCCAAAGCAGTCACAATCACATCTTGCCTGGTGTAGAATTCATCACTGTAAGTGTTTTCGGTGGCTGGACAAACTTTATTAATGTATGAGTCAATTTTTAAGCAAGGATTGATGTTCAGAGTTGCTTCTGCTGCAGTATAGCTTTTAGGTTTCTGAA ..:......:.:.:------.:..:..x:::..:-----..x.....:..x.:.........x...........:..:..x..x..x.:...:........::.:..:.....:......:.....:..x.:..:....:......x.....:..x.x..:..x:..x..:....xx::..:...x..x........x..x..x..x.....:................:.. 14M6D14M5D193M 165/221 74.7% 221/94230402 0.0% 11/221 5.0% 14496087 NA +6701 chr4 + 190214555 67641133 67641132 67641232 100 AACAGAATAGCAACATACCTGTATGTGATGAGGACGAAATAGGAACTGTCTATTTAAGTTGGATTTCTCTATCAAGTCAGGATCTGTAACTGTAATCTAA chr4 + 94230402 53144239 53144238 53144335 53144239 53144238 53144335 97 AACAAAAAAGCC---TACCTGTATGTGATGAGGTCGAAAAAGAAACTGTCTGTTCAGGTTGGATTTCTCTATCAAGTCTGGATCTGTAATTGTAACCTAA ....:..x...x---..................x.....x..:........:..:.:.....................x..........:.....:.... 12M3D85M 85/97 87.6% 97/94230402 0.0% 3/97 3.1% 14496894 NA +5743 chr4 + 190214555 67644693 67644692 67644793 101 CTTACCATTCCTTTCTCTTTGCTTGTGCCAACACCAAGTAAAGCAAAATTTTTCAACATTTCACAGCCTATGGCTCCACACCCTACCTATGGAGGAGAAAA chr4 + 94230402 53144710 53144709 53144810 53144710 53144709 53144810 101 CTTACCAATCCTTTATCTTGTCCAGTACCAACACCAAGAAGTGCAAAGTTTTTTAGCATTTCACAGCCTATTGCTCCACAGCCAACCTGAAGAGAATGAAA .......x......x....xx.:x..:...........x.:x.....:.....:.:...............x........x..x....:x:...:.x:... 101M 79/101 78.2% 101/94230402 0.0% 0/101 0.0% 14499983 NA +6200 chr4 + 190214555 67645923 67645922 67646072 150 ATTATTGATACTTACTAAGAAGATGTTTAAATTTTGCAGTTTCTGACACAAAGTGTCTCCAATGCAAGCTCTTAAGGCATCATATCTATCTCCTCTGAAAAAAATAACATATACCAAAAAGCAGAAATAAAAAACATTAAAATTAGTTTC chr4 + 94230402 53146831 53146830 53146971 53146831 53146830 53146971 141 ATCAGTTGTACTCACCAAGAAAACATTCAAATCATGCAGCTTCTGGCACAGAGACTCTCCAATACAAGCCCTCAAGGCATCATATCTATCTCCCCTAAAGTGAGG---------CAGGAAACAGAAACAGATGAGTAGCAAGTTATTTTC ..:.x.x:....:..:.....:.::..:....:x.....:.....:....:..xx........:.....:..:....................:..:..:x:.:x---------..::..:......:.:.x:.xxxxx..:...x.... 105M9D36M 100/141 70.9% 141/94230402 0.0% 9/141 6.4% 14499092 NA +3193 chr4 + 190214555 67646713 67646712 67646809 97 TTCATTATTACCGTGGGAGAAATTCTTCACATTCAGGTTTGCCTAGTGATTCAACAATATCTGCTGCTTCAAGATATAACTT--AAAGTAGAAGATTAA chr4 + 94230402 53147164 53147163 53147262 53147164 53147163 53147262 99 TTCATATTTACCGTGGAAGAAATTCTTCAGAGCCCATCTTTTCTAGAGGTGTAACGATGTCTAACATATCTATATACAACTGTAAAAACAAAAAATGAA .....xx.........:............x.x:.x:x:..x:....x.:.x:...:..:...:x:::x..x.x...:....x--...::.:..:..x.. 82M2I15M 64/97 66.0% 99/94230402 0.0% 2/97 2.1% 14499549 NA +8851 chr4 + 190214555 67649059 67649058 67649237 179 AGAACTAACCCACTGGCACAAAGGAGAAAATTTTCCTGTTACAGCTTTCAATACTTCTTGGCTGGCAACACCTCCTACTGCTGCAGCAAGTGGAGATAAAAAGCCTTGGGCAGTCCAAGAGAGCCAATGCACAATGTCAGCATTTACATCAGGCTAAAACAAAAGCCATAAAAGACAAT chr4 + 94230402 53147770 53147769 53147947 53147770 53147769 53147947 178 AGGCCTTACCCATTGCTGCAATGGAGAAAATTTTCCTGTTACTGCTTTCAGGACTTCCTGGCTAGCAACACCACCCACTGCTGCTGCCAGAGGAGCTAGAAATCCCTGAGCAGTTCTGGACAGCCACTTCACTACATCTCCATTTACCTGAGGCTTAAAGAAAGAACA-AAACAACAAT ..:x..x.....:..x::...x....................x.......:x.....:.....:........x..:........x..x..x....x..:...x..:..:.....:.x:..x.....x.x...x.::..xx.......x.x.....x...x...::x..-...x:..... 168M1D10M 135/178 75.8% 178/94230402 0.0% 1/178 0.6% 14501289 NA +3171 chr4 + 190214555 67657833 67657832 67657888 56 AAAAAAAAAAAGAAAACAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATA chr4 + 94230402 82576602 82576601 82576657 82576602 82576601 82576657 56 AAAAAAAAAAAAAAAACAACAAAAAAGCAACCCAAACAAGCAGAGGGATAAGGATA ...........:.......x...x..:......x.x...:x..x...xx....... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -14918769 -79311633 +4331 chr4 + 190214555 67663877 67663876 67663970 94 TTATTTACCTCAGGGTTGCTAAAATCCACAATAAGGCACTTTGGATGTTTTAACTGCCTCTCCAGTGATTCCTGATAGGAAGGAAAAAGTCATT chr4 + 94230402 53150144 53150143 53150234 53150144 53150143 53150234 91 TTAATTACCTCAGGCTTGATAAAATCTGCAACTAGGCACATTGGATTTGTTAGCTGCTTCTCCAACCGTTCCTG---GAGAAACAGAATTCATT ...x..........x...x.......::...:x......x......x.x...:....:......::x:......---.::.::x.:..x..... 74M3D17M 68/91 74.7% 91/94230402 0.0% 3/91 3.3% 14513733 NA +6167 chr4 + 190214555 67665177 67665176 67665307 131 AAAAATACTTACAAAAAAAACTGTTTTAGGAGTCTTAACTTGGACAGCTATGCCTCCATGTAAATATGGTTCCAGTTCTGTGGTGTCACCAATACTAAAAGAAAATGGCGATATCACT-AGAAGACAAAAAA chr4 + 94230402 53150981 53150980 53151112 53150981 53150980 53151112 132 AAACACACTTACAAAGTAAAACATCTTGGGTGTCTTCACTTGGACAGCTATGCCACCATGCAAGTAAGGCTCCATGTCTGACGTATTTCCAATGCTGAAGGAGTACGGTGACACCACTGAAAAGAGGAAAGA ...x.:.........:x...x::.:..:..x.....x.................x.....:..:..x..:....xx....xx..:.:x.....:..:..:..:x.:..:..:.:....-.:....x:...:. 118M1I13M 95/131 72.5% 132/94230402 0.0% 1/131 0.8% 14514196 NA +3059 chr4 + 190214555 67665408 67665407 67665454 47 ATAGTGTTTTTTTTTGTTTGTTTGTTTTTTTTTTTTTTTAATGAAGA chr4 + 94230402 48553586 48553585 48553632 48553586 48553585 48553632 47 ATATTACTTTTTTCTGTCTGATTCTTTTTTTTTTTTTTTAATGAAAA ...x.::......:...:..x..x.....................:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 19111822 NA +3002 chr4 + 190214555 67665409 67665408 67665463 55 TAGTGTTTTTTTTTGTTTGTTTGTTTTTTTTTTTTTTTAATGAAGAGCTGGGAGG chr4 + 94230402 41855257 41855256 41855309 41855257 41855256 41855309 53 TGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTGGTGGGGAG--AGGAGG .:.x.:....................x..x........::..::...--:..... 47M2D6M 43/53 81.1% 53/94230402 0.0% 2/53 3.8% 25810152 NA +9311 chr4 + 190214555 67668546 67668545 67668713 168 CTTACCCGTTATTTGTTGTATAGATCCATTTAAACCTGTCATTCCATTAATTTCTCGAAATGTTAGGAATTGTCCTGTCTCCAGTTTGTGAGGATGATTTTCAAGGCAAGTAACAATGCCAGGATTTGCCTAAAAATAAGAGTA--------ATCTATTAAAAAAGAACTTCTTTT chr4 + 94230402 53152313 53152312 53152488 53152313 53152312 53152488 176 CTTACCTGTTATCTGGTGTGTGGAGCCGTTCAAACACGACATTCCATTAACTTCCCGAAAGGTTAAGAACTGCCCTGTTTCAAGCCTGTGTGGATGATTTTCAAGGCAAGTGACAATACCAGGATTTGACTGAAAGCAAAAGCAGCAAAGTTAGCAAAGAGAAAAGAGTTTCGTTT ......:.....:..x...:.:..x..:..:....x:.x...........:...:.....x....:...:..:.....:..x..::....x....................:.....:..........x..:...::..:..:.--------.x.x.xx.:......::...x... 144M8I24M 130/168 77.4% 176/94230402 0.0% 8/168 4.8% 14516233 NA +9909 chr4 + 190214555 67670467 67670466 67670609 143 TACTTGCGTTATGTTTGAAATGAAAATTTCTTTTGGTTCTTCTCCTGTTGTATCTAAAACTTCAAATTCATCACCGAAATCACAAAATAACCTTGACCAAATTCCATGTACATCTGCACTGATAAACTGTAAAAT--GGCAAAAA chr4 + 94230402 53153487 53153486 53153631 53153487 53153486 53153631 145 TACTTGTGTTATATTTGAAATGAAGATTTCCTTTGGCTCCTCTCCTGTTGTATCCAACACTTCAAATTCATCACCGAAGTCACAAAACAAACGTGAACATATTCCATATACATCTGCACTGATGAACTACGAAACAAAGCAAAAA ......:.....:...........:.....:.....:..:..............:..x....................:........:..x.x...x..x.......:...............:....:::...:--:....... 135M2I8M 122/143 85.3% 145/94230402 0.0% 2/143 1.4% 14516980 NA +6089 chr4 + 190214555 67673661 67673660 67673809 149 GGTTAACTACATGTCATTACTAAATGATACAATTACCTTAATTGGAGGGCACTGAGAACGGCAAAAGTCATTGATCTTCTTCTGCAATGGAAGTTTCATCTCAGTCAATACTACACACTGTTGAGAAAACAACAAATTAAAAACTAGAA chr4 + 94230402 53154103 53154102 53154243 53154103 53154102 53154243 141 GATTAATCACCTGT------TTAATTTTTCTATTACCTTAATGGGTGGCTGCTGAGCATGACAGAAGTCATTAATCTTCTTCTGCAGTGATAGGTTTACTTCAGTCAATATGACACACTGTGAGTAAGAATACAAAT--AAAGCTAAAA .:....::..x...------.x...xx.x.x...........x..x..x::.....x.:.:..:........:.............:..:x..x..:.::..........:x.........x::x..:.xx......--...:...:.. 14M6D117M2D10M 104/141 73.8% 141/94230402 0.0% 8/141 5.7% 14519558 NA +8428 chr4 + 190214555 67682114 67682113 67682242 129 CTTACCAATTTCCAAACCAAGACCACCCATCCCACTTAAGAAAACATGGGACTTGGCCATCTTCTGCATTGCTGTGTCTCCAAGAACGTACCTCTGTCGACTACAC----GGAAAACACAATAAAAAACAAAA chr4 + 94230402 53157495 53157494 53157627 53157495 53157494 53157627 133 CTTACCAATCTCCACACCAAGACCACCTACACCACTCAGGAACACATGGGACTGAGCCATCTTCTGCATTGCTGTGTCTCCAAGAACATACCTCTGCCGACTACATCAAAGATAAACTCAAATTAAAACAAGA .........:....x............:.:x.....:.:...x..........x:................................:........:........:----.:x....x...xxx.......:. 106M4I23M 109/129 84.5% 133/94230402 0.0% 4/129 3.1% 14524619 NA +3797 chr4 + 190214555 67683438 67683437 67683628 191 CACTTAAGAGTTGTTTCTCTGATACAAGCTTGTCCAACCCACGGTCCACAGGCTGCATGCGGCCCAGGACAGCTTTGAATGCGGCCCAATACAAATTCGTAAACTTTCTTAAAACATTATGAGATTTTTTTGCAATTTTT--TTTTTTTTTTAGTTCATCAGCTATCATTACTGTTAGTG--GATTCTATGTGTG chr4 + 94230402 57173931 57173930 57174111 57173931 57173930 57174111 181 CACTCTTGAATGGTCTAGTTGAATTGGACAAGTCCAACCCATGGTCCACAGACTACATGCAGCTTGGGATAGCTAGCAATATGGACCCATA--------------TGTTCAAGAAATTTTAATACTATTATGTGAATTTTAGTTATATTTTTCATGAGTCAGTTGACCTCAACTTGAGTGCAGATTGCATAGGTG ....:xx..:.x..:.xx:...xx::::.xx..........:.........:..:.....:..:::...:....xxx...::..x..x...--------------.x:.:..:.x...x.:.x.:.x..x..::.x....--..x.x.....x:.xx:....:.:x.x.:.x:x.x....--....x:..:x... 91M14D35M2I38M2I13M 111/177 62.7% 181/94230402 0.0% 18/177 10.2% 10509507 NA +3187 chr4 + 190214555 67686962 67686961 67687046 85 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAAACAACCTACCGTTTTTACATAAAATCTTTAAGACTATGTTTTTTTTTTTT chr4 + 94230402 49163132 49163131 49163216 49163132 49163131 49163216 85 AGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAACAAGACTTTATTTCTTTCTTTT .:...:...............:..x...x:x.x.....xx.xxx::.x.::.x.....x..xx:......x.:...:...:.... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 18523830 NA +3298 chr4 + 190214555 67696361 67696360 67696476 116 ATTTTAACTTGAGAGGAACTCTTTATATATATGTGTGTATATATACACACACATATACATATATACACACATATATATACA-CATATACACATATATATACATATACATATATACAC chr4 + 94230402 58675369 58675368 58675481 58675369 58675368 58675481 113 ATTTGAACTTG----GATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAATTGTAAAGACAGAAAGACATAC ....x......----..x....x:.:..x.x...:..:.......:....x.....::::.:.:....x..x......x:.-.x.....x:.x.xx.:..x.x.:.x.x.x.:.:.. 11M4D66M1I35M 76/112 67.9% 113/94230402 0.0% 5/112 4.5% 9020992 NA +3227 chr4 + 190214555 67696374 67696373 67696479 106 AGGAACTCTTTATATATATGTGTGTAT--------------ATATACACACACATATACATATATACACACATATATATACACATATACACATATATATACATATACATATATACACATA chr4 + 94230402 21109182 21109181 21109301 21109182 21109181 21109301 120 AGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .....x.:.x:x....:........x.--------------....::..x.........x::.:...x:.:.::...:...x...::x:x::.:.....:::...:x....::.::..:. 27M14I79M 67/106 63.2% 120/94230402 0.0% 14/106 13.2% 46587192 NA +3556 chr4 + 190214555 67696391 67696390 67696472 82 ATGTGTGTATATATACACACACATATACATATATACACACATATATATACACATATACACA---TATATATACATATACATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..........::.:.....:x:..:x......:..........:.:.:.....x:x.x.x.---..:..:x.:.x...:...... 61M3I21M 59/82 72.0% 85/94230402 0.0% 3/82 3.7% 44448669 NA +3167 chr4 + 190214555 67696397 67696396 67696485 89 GTATATATACACACACATATAC-ATATATACACACATATATATACACATATACACATATATATACATATACATATATACACATATATACA chr4 + 94230402 46063276 46063275 46063365 46063276 46063275 46063365 90 GTATTTTTCCTGGCACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....x.x.x.xx:.....x...-...:..::::....:.:...:x:..:..::x...:...:.x:............:xxx......... 22M1I67M 60/89 67.4% 90/94230402 0.0% 1/89 1.1% 21633121 NA +3797 chr4 + 190214555 67696634 67696633 67696728 95 GAGATTCTTACCTATACAATGCATCATCGATTTCCACAGATGCTGTTGACATAATGGGCAAATTTTTATTTGTGCT-----------GGAAAAAAAAACATGGTTA chr4 + 94230402 53158762 53158761 53158867 53158762 53158761 53158867 106 GATACTCTTACCTATACAAAGCATCGTCGATTTCCATAGAGTCTGTTGCCATGATGCAATGTGATTGATTTGCACTAAACTGATTACAAAATAAAGAATATAGTTA ..x.:..............x.....:..........:...xx......x...:...x:xx:xxx..x.....::..-----------::..x...:..:..:.... 76M11I19M 69/95 72.6% 106/94230402 0.0% 11/95 11.6% 14537872 NA +3285 chr4 + 190214555 67698831 67698830 67698902 72 GCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCGCTTGAACCCGGGAGGAGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....x.:...........::........x:xx.x...x.:.........:.:..xxxx:.....:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -8334375 -85896027 +3086 chr4 + 190214555 67698952 67698951 67698995 44 CTCTGTCAAAAAACAAACAAACAAAACAAAACAAAAAAACCCTG chr4 + 94230402 73208170 73208169 73208213 73208170 73208169 73208213 44 CTATATTTAAAAACAAACAAACAAAACAAAACAAAAAAACTATG ..x.:.:x................................:x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -5509218 -88721184 +3085 chr4 + 190214555 67720189 67720188 67720262 74 TGATGGTGTCCTTTGGCCTCAGCAGCACTTTGGACAGGATGGAAAAAAGTTTTAGACACATCTGCAGGTCTCTG chr4 + 94230402 20894655 20894654 20894728 20894655 20894654 20894728 74 TGATGGTCTCATTGGCTTTCTGGAGCAACTCTGATAAAATAGTGAAAAGTTTTAAGCACATCTGGGGATCTTTG .......x..x..x.x::..x.x....x:.:x..:.::..:.x:..........::........x:.:...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 46825534 NA +3225 chr4 + 190214555 67749599 67749598 67749711 113 TTCTTTTCCTCCTTCCCTCCTTCGTTT-----TTCTTTTCTACCTTTCCTCCTTTTTCCTCCCCTTCCCTCCTTTCCCTCCCTCCCTGCCTCCTTTCCTTC-GTTCCTTCCTTCTTTCC chr4 + 94230402 61286231 61286230 61286349 61286231 61286230 61286349 119 TCTTCCTCCTCTCTGCCTCCTCCAGTTGTCTGTTCTTTTCTGTCTTTCCTCCCATCTCCCACTCTCTCCTCTTCTGGTTCTGTCCTTATTAATTATCTGACAGCTTCTTCCTTCATACC .::.::.....::.x......:.:x..-----.........::.........:x.:...:x.:..::....:.:.xx:..:x...:.:::xx:.x..:xx.-.:.:........x.x.. 27M5I69M1I17M 71/113 62.8% 119/94230402 0.0% 6/113 5.3% 6463368 NA +3726 chr4 + 190214555 67759447 67759446 67759529 83 CATGGTGGCATGCACCTGTAATCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.......:.::::........x.xx.x...x.............:..x.xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -8273750 -85956652 +7250 chr4 + 190214555 67766473 67766472 67766658 186 TTTTGCACTAAAGACCAGTTTTGGATAGGATCCAGTCTCAATAGTATGTCACTTGAGTGTAGACACTAGGCTTGTTTGGAAGAGCACGTTCATTTCTCCAGCTTTCAATACCAGCAGGGAACCTTTAGCAAGGATGCCTTTAGAATCTGTACCAACCAGTGGTCCACCAGAGTCACCCTAGAGAGA chr4 + 94230402 53167743 53167742 53167920 53167743 53167742 53167920 178 TTTGGAATTAGATGCCAGTTTTTGAGGTAATCCAGTCACGGAAATAAGTCACTCGTGTGTAAACTCCAGGTTTGTTTGGCTTGGCACATTCATCTCCCCAGCTCACTATTCCCACGAGGTACCAC--------ATCAGTCTAGAATCTGGAGTAACCAGCGGTCCCCCAGAGTCTCCCTGGAGAAA ...x.x.:..:.x:........x..x:x:........x.::x.:..x......:.x.....:..x.:...:........xxx:....:.....:..:......:x.x..x..x:.::..x...x:--------..xxx.:.........x.x:......:.....x........x....:....:. 125M8D53M 125/178 70.2% 178/94230402 0.0% 8/178 4.5% 14598730 NA +6556 chr4 + 190214555 67766482 67766481 67766659 178 AAAGACCAGTTTTGGATAGGATCCAGTCTCAATAGTATGTCACTTGAGTGTAGACACTAGGCTTGTTTGGAAGAGCACGTTCATTTCTCCAGCTTTCAATACCAGCAGGGAACCTTTAGCAAGGATGCCTTTAGAATCTGTACCAACCAGTGGTCCACCAGAGTCACCCTAGAGAGAA chr4 + 94230402 53216048 53216047 53216217 53216048 53216047 53216217 170 AGATGCCTGTTTTGGAAGCGATCCAGTCTCGATATGCAGTCACTCGTGTGTACACTCCTGGTTTATCAGCCTTGCCACATTCATCACCCCAGCTCACTATTCCCACGAGATACC--------AGATTCCTCTGGAATTTGCATGAACCAGTGGCCCACCAGAATCACCCTAAAGAGAA .:.x:..x........x:x...........:...xxxx......:.x.....x..x.:x..:..:.:x.xxxx:x...:.....:x.:......:x.x..x..x:.::.:x...--------:...x...:.:....:..:.:x.........:........:........:...... 114M8D56M 117/170 68.8% 170/94230402 0.0% 8/170 4.7% 14550434 NA +4925 chr4 + 190214555 67770560 67770559 67770722 163 AGACTTACCTGGCAGGCATCCACACGTGGCTCCAGGAACCCGGCACACAACATTCCAGATGTGATGACTCTGCCATCTGCCTCCCCATTGTTGCAGGTCCTATTATCTATAATCTTCACTAATCCCTTGTGGAGTACATTAGAAGTTGTTCGTAAAGGAAGAA chr4 + 94230402 53216619 53216618 53216781 53216619 53216618 53216781 163 AGACTTACCTGGCAAGCATCCACCCGTCCCTCTAAGTATCCAGCACACAACATTCCTGGTGTTATTGCTCCAGCATACACTTGTGGTCTATTACAAACCGCAGTGCTAATAATTTTTACTTCTGCTTGTCGAAGCTGATTAACACTAGGGCCTAGAAGGAAAA ..............:........x...xx...:.:.x.:..:..............x.:...x..x:...::x...x::.:.x:xxx:.:..:..:::.x:.x.:::x.....:..:...xx.x.:.xx:.:..:xx....:x.x.x.xx.x..:.:.:.:.. 163M 100/163 61.3% 163/94230402 0.0% 0/163 0.0% 14553941 NA +5914 chr4 + 190214555 67770564 67770563 67770723 160 TTACCTGGCAGGCATCCACACGTGGCTCCAGGAACCCGGCACACAACATTCCAGATGTGATGACTCTGCCATCTGCCTCCCCATTGTTGCAGGTCCTATTATCTATAATCTTCACTAATCCCTTGTGGAGTACATTAGAAGTTGTTCGTAAAGGAAGAAA chr4 + 94230402 53169186 53169185 53169345 53169186 53169185 53169345 160 TTACCTGACAAGCATCTACTCCTCCTTCCAAGTACCCAGCACACAACATCCTAGGTGTTATGTCCCCATCATACACTTCTTTTCTGTTGCAAGTGTCTGAGTCGATAAGTTTCACTGTTGCTTCCTGAAGAGCATTAGGAGTCGGACCTGAGGGAAAGAA .......:..:.....:..x.x.xx:....:.x....:...........:.:..:...x...x.:.:::...x::.:..:::x:.......:..x::xxx:..x....x:......:x.x.:.:x..:..x:......:...:.xx.x.:.:....::.. 160M 102/160 63.8% 160/94230402 0.0% 0/160 0.0% 14601378 NA +3394 chr4 + 190214555 67771306 67771305 67771384 79 GTGGTTCATGCCTGCAGTTCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCACTTGAACCTGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x..:.--..:...............:x........x.xx.x...x..........::::..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -8261895 -85968507 +3574 chr4 + 190214555 67771429 67771428 67771516 88 GAGACTCTGTCTCGAAAAAAACAAAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAAAAA--CAAAAGAAAACAAAA chr4 + 94230402 87692597 87692596 87692686 87692597 87692596 87692686 90 GAGATACCATGTGAAAAAAAAAAACAACAGCAAAACAACCAAAAATGAAACCAACCAACCAAACTAAAAGCAACCCAACAAACAACAAAA ....:x.::.x.x:.......x..x....:x.x..x...x.....x:.................x..x.:x..--...x.:.x....... 73M2I15M 65/88 73.9% 90/94230402 0.0% 2/88 2.3% -19921168 -74309234 +3479 chr4 + 190214555 67771433 67771432 67771512 80 CTCTGTCTCGAAAAAAACA--AAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAAAAACAAAAGAAAAC chr4 + 94230402 57454486 57454485 57454565 57454486 57454485 57454565 80 CTTCATTTTAAAGCAAATATTAAAGCAAAACAGCGACAACAACAAAAATCAACCAACCAACCAAAC--AAACAAACAAAAAC ..:::.:.::..:x...:.--...:.......:x:....x..x.....:...........x.....--.......x:..... 19M2I45M2D14M 59/78 75.6% 80/94230402 0.0% 4/78 5.1% 10316947 NA +3025 chr4 + 190214555 67771443 67771442 67771506 64 AAAAAAACAAAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAAAAACAAAA chr4 + 94230402 621660 621659 621723 621660 621659 621723 64 AAACAATCAAAAATAAATAAACTAATAAATAAAAACCCAACCAACCAAGCAAAAGAAAAAAAAA ...x..x......:...xx..xx.xx...x.....x............:....x:....x.... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 67149783 NA +3463 chr4 + 190214555 67771452 67771451 67771581 130 AAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAAAAACAAAAGAAAACAAAATGAAAAACTCATATTGCAGGAGCATACATTTTATGATTATTTAAAAATTTTTAAGCTAAATTTTT chr4 + 94230402 6279104 6279103 6279207 6279104 6279103 6279207 104 AAATCAGGGAAAAAAAAATAAAAAAAAACAACCAACCAACCAACCAAAAACCAACGCAGAGAGGA---------CAAATTGTGGGA-----------------ATATAAAAACTATTAAGATAAACTGTT ...x..:::x.....x..x........x...........x...x.......x..x.x.:.x.::.---------..x....::...-----------------..x......:.x.....x....:.x.. 65M9D12M17D27M 78/104 75.0% 104/94230402 0.0% 26/104 25.0% 61492348 NA +4799 chr4 + 190214555 67773683 67773682 67773857 175 GTAGGCTTTTAAGGACTTGAGTGACTTTGAGGCCTTACCTTATGAAGCAGTGAGCAGCAGTGATAAGCCAGCTGTTACTAAGCCATGTGGCTCCGCGTCGGTAGACATTGTTCTGTGGAAGGCTAGCTTGCCAGGGCCATTCTCCTTCCTCAGCATCCAGACCCTCTGCTATTCT chr4 + 94230402 53218054 53218053 53218228 53218054 53218053 53218228 175 GTAGGTCCTACAGGATCAGAAGGGTGCTAATAACTTACCCTTTAAAGCAGTGGGCTGCAGTCACTAGCCACGTATTACTGATCACCGACGCACCGCAGTAATGTGTCCCATCGAGCTGAATACTAGCCTGCCATGGCCATTCTCCATCCCGTGCACGCTGTCCATCAGTTATTCT .....:::.xx....::x..:x.::x:.:.x:x......:.x.:........:..x.....x.:x.....xx.:.....:.x.xx:.xx..x....:x:::.:x::x:::.:xx.:x...x:.....:.....x...........x...:xx...:x.x.x..x..x.:...... 175M 105/175 60.0% 175/94230402 0.0% 0/175 0.0% 14555629 NA +3166 chr4 + 190214555 67796076 67796075 67796127 52 TGTGTATGTGTATATGTATATATGTGTGTGTATGTGTGTGCGTGTGTAAATA chr4 + 94230402 6857611 6857610 6857662 6857611 6857610 6857662 52 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA .:.:..:..::...:.....x..........x........:..x..x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 60938465 NA +4336 chr4 + 190214555 67802482 67802481 67802551 70 ATAATAATACTTAGCACTTATACAACTTTTCATCTTCAAAGTGTTTTCTGAACATTTACTAATTAATTTT chr4 + 94230402 41768501 41768500 41768570 41768501 41768500 41768570 70 ATAATATTACTTAGCACTTACAGCGCTTTTCATCTTCAAAGCATTTTGCAAACATAAACTAATTAATCTT ......x.............:.xx:................::....x::.....xx..........:.. 70M 57/70 81.4% 70/94230402 0.0% 0/70 0.0% 26033981 NA +3312 chr4 + 190214555 67802844 67802843 67802906 63 ATGTTCTTCAACTTATAATTCTCTTGCCTCCTTTCCTCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757793 53757792 53757855 53757793 53757792 53757855 63 ATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTT ..x..:....x..:x...x..:.::x..:..:::.............::.......:...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 14045051 NA +3137 chr4 + 190214555 67804205 67804204 67804259 55 CAGGAGTTTGTGCGTGTGTGTATTTGTGTGTGTGTGTATGTGTGTGTGTGTTTAG chr4 + 94230402 39131742 39131741 39131796 39131742 39131741 39131796 55 CAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAG ..:.x......:..::x....:.:...x.x........x.....::......... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 28672463 NA +3735 chr4 + 190214555 67807436 67807435 67807518 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCACAAGAATCCTTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:............:........x.x::x...x.x:........:.:..x:xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -8225761 -86004641 +3246 chr4 + 190214555 67816650 67816649 67816719 70 CATAATGGTGGGCACCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.:.....--...x...::.:...........::........x.xx.x...x::......:..:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% -8216547 -86013855 +7578 chr4 + 190214555 67822339 67822338 67822509 171 AGATCCCAGTTTGTTGCCTAATCCAGTCAAGGTAGGCTGTCACTCGAGTATACACTCCTGGCTTATCCGGCAGGCCACACTGATCTCCCCAGCTTACTATCCCCACAATAAACCAAAGCCGCCGTGAGTCTTCTTGTACTAGTGGGCCACCAGAGTCACCCTGTAAAAAAA chr4 + 94230402 53216048 53216047 53216218 53216048 53216047 53216218 171 AGATGCCTGTTTTGGAAGCGATCCAGTCTCGATATGCAGTCACTCGTGTGTACACTCCTGGTTTATCAGCCTTGCCACATTCATCACCCCAGCTCACTATTCCCACGAGATACCAGATTCCTCTGGAATTTGCATGAACCAGTGGCCCACCAGAATCACCCTAAAGAGAAA ....x..x....xxx:xx::........xx.:..x..x........x..:...........:.....x.x.xx......:.x...x........:.....:.....:.x.x....:.x:.x:.xx..:.:.x.x..x..:.....x........:.......:x.:.:... 171M 122/171 71.3% 171/94230402 0.0% 0/171 0.0% 14606291 NA +3172 chr4 + 190214555 67843074 67843073 67843125 52 AGAGAAGGGGAGAAGGAAGCAAAGGGCAGTCTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 851741 851740 851792 851741 851740 851792 52 AAAAAGGGGAAGAAAGAGAAAAAAGGGAGTTTTTTTTTTCTTTTTTTTTTTG .:.:.:...:....:..::x...:..x...:........:............ 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 66991333 NA +3019 chr4 + 190214555 67844650 67844649 67844702 53 GCACCTGTAATCCCAACTACTTAAGAGGCTGGGGCAGGAGAATCACTTGAACC chr4 + 94230402 76033206 76033205 76033258 76033206 76033205 76033258 53 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC ....x....:.:...:......:.:......:.x.xx.x...x.......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -8188556 -86041846 +3104 chr4 + 190214555 67855126 67855125 67855184 59 GCGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x....:.::..........::........x.xx.x...x::.........:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -8178080 -86052322 +3003 chr4 + 190214555 67857289 67857288 67857341 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 44609567 NA +3036 chr4 + 190214555 67857304 67857303 67857343 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 63448222 NA +3353 chr4 + 190214555 67899721 67899720 67899803 83 CATGGTGATGAGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:..x::.--....:.:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -8133476 -86096926 +10200 chr4 + 190214555 67911284 67911283 67911586 303 GAATTCTCATGCATATATGACCTGCATACAGCTTTCTTTGTTTAACTTTTATCGTGAATTAGATGCCTGTTTTTGAAGCAATCCAGTTTCGGTAATAAGTCACTTGTGTGTAGACTCCAGGCTTGTCCTTTTGACCACAGTTATCTCCCCAGCTTACAATTCCAATGAGATACCACGTATCTTTCAGATCCCTTGTGACTAAAGGTCCCCCAGAATCACCCTAAAAATAAAAACATAAGAAAAAAGAAAGAAAATTAGCT------------AAACATAAAGCTCATTAT--TTAAGATATTTTGATGAATCACATA chr4 + 94230402 53167697 53167696 53168007 53167697 53167696 53168007 311 GAATTATGAGTTACGTGTAACCTATGTAATTATATCCATTTTTGATTTTG-----GAATTAGATGCCAGTTTTTGAGGTAATCCAGTCACGGAAATAAGTCACTCGTGTGTAAACTCCAGGTTTGTTTGGCTTGGCACATTCATCTCCCCAGCTCACTATTCCCACGAGGTACCACATCAGTCTAGAATCTGGAGTAACCAGCGGTCCCCCAGAGTCTCCCTGGAGA-AAGAGGAGGGGGAAAAAAAAAACAATTTAATTGTTCAGAAGGGAAAATATAAGTCTCTTCACAGACAAGAAGGCTTGATGCATCCCATA .....x.x.xx:.::.:.:....:::..xxxx.x..:x.x...:.:...x-----............x........:.:........:x...x...........:.......:........:....::xx:.x:x....x.:............:..x.....x.:...:......:.xxx.:.x::...:xxx..:..:.:x...........:..x....::.:.-..:.:x.x::.:.....:...:x..x...::.------------...:....:x...x.:.:--x:....x:x:......x...x.... 50M5D172M1D32M12I18M2I25M 202/297 68.0% 311/94230402 0.0% 20/297 6.7% 14743587 NA +8991 chr4 + 190214555 67911342 67911341 67911602 261 TTAGATGCCTGTTTTTGAAGCAATCCAGTTTCGGTAATAAGTCACTTGTGTGTAGACTCCAGGCTTGTCCTTTTGACCACAGTTATCTCCCCAGCTTACAATTCCAATGAGATACCACGTATCTTTCAGATCCCTTGTGACTAAAGGTCCCCCAGAATCACCCTAAAAATAAAAACATAAGAAAAAAGAAAGAAAATTAGCTA--AACATAAAGCTCATTATTTAAGATATTTTGATGAATCACA-TATTTTGTTAC--TAGACAG chr4 + 94230402 53216046 53216045 53216302 53216046 53216045 53216302 257 TCAGATGCCTGTTTTGGAAGCGATCCAGTCTCGATATGCAGTCACTCGTGTGTACACTCCTGGTTTATCAGCCTTGCCACATTCATCACCCCAGCTCACTATTCCCACGAGATACCAGATTCCTCTGGAATTTGCATGAACCAGTGGCCCACCAGAATCACCCTAAAGAGAAAAATGTCAGCGGACAGGAACAAAA--AGCAAACAACATTCACTTCACTAATGCAGAGA-------GCATCATATTGTTATGTTACAATGGACAG .:.............x.....:.......:...:..xxx.......:.......x.....x..:..:..xx::.x:.....x.:...x........:..x.....x.:.........x:.x:..:.x::..::x:xxx:..:.:x..:..x................:.x.....::.x..x::.x..:..x....--...x.--.....xx.x:...:..x.xx...x.-------.x....:.-.:..x......--.:..... 196M2D5M2I25M7D8M1I11M2I7M 179/252 71.0% 257/94230402 0.0% 14/252 5.6% 14695296 NA +5229 chr4 + 190214555 67911350 67911349 67911568 219 CTGTTTTTGAAGCAATCCAGTTTCGGTAATAAGTCACTTGTGTGTAGACTCCAGGCTTGTCCTTTTGACCACAGTTATCTCCCCAGCTTACAATTCCA-----ATGAGATACCACGTATCTTTCAGATCCCTTGTGACTAAAGGTCCCCCAGAATCACCC-----TAAAAATAAAAACATAAGA---AAAAAGAAAGAAAATTAGCTAAACATAAAGCTCATTATTTAAGAT chr4 + 94230402 84945755 84945754 84945976 84945755 84945754 84945976 222 CTATTCTCTCATTAATCCAATTTACATAGTTTGTTACTCTTGTATATACTCCAGGCTTGTTGACTCTGCCACAGCCATCTCCCCAGCTGATGACTCCATAAAGGTAAGAGATTTCATTTTTCTCACA--------GGCCAGAGGTCCACCAGAATCTCCCTGTGTTAAAAGTAAGGAAAGATTATTTAATTTGACAGAAAATCA-CTGGAAAAACAGTTTA-CATGTAAGAT ..:..:.:xx.x:......:...xx:..:.xx..:...:x...:..x.............:xx:.:x:......::............x.::.:....-----:.:...x.::x.:.x.:.:...x.--------.:.:.:......x........x...-----.....:...::.x.x.xx.---..xxx..x.......:.-..::.x.x.x..:.:.-:..x...... 98M5I24M8D25M5I19M3I17M1D16M1D10M 140/209 67.0% 222/94230402 0.0% 23/209 11.0% -17034405 -77195997 +5416 chr4 + 190214555 67918962 67918961 67919252 291 GAGATACCCACCACCATAGTAAAGTGCTCCAAATCCTGTGATGTGGACAGTCAAATTTGGTTGGAAGGATGCA-GAGGCTTCTGGCAAACAAATCTGGCGTATGTCATCCGAAAAGGTGACTCTGGAAGAGACCTGCACAACAGCAATGTCGTACTCTCTTGCTG---CAGAGCG---GTACTTCTCATGGATAATAAATCTTCTGACATTTCTTTTCATTAAGGGAGGGTTGATTTTTGTTCCAAAACTAACAGTCCATTGATGTGGATTTTTATACCTGGAAAAGGTTAGAAATTA chr4 + 94230402 53217578 53217577 53217874 53217578 53217577 53217874 297 GAGACACTCACCATCATTCTTCAAAGCTCCCCAACCTGAGACA-AAACAGGAAGTATTATCCCGTAATATGTAAGATGCTTCAGGAAGACAGACACTGTGCACATCACTTGTGAACTCAATAGAGGAGGCAAGTTCCACAAGAGCTATATCATACTCATGATCAGGGACAAAGCCATCGTATTTTTCATGAATGATAATTCTTCGGACATATTTTCTCTGTTTTGGAGGTCTCAACAGAGTTCCAAAGCTGGCAGTCCATCTCCGAGGTTCTCTTTCTCTGAAACACATTGGCAATTA ....:..:.....:...xx.xx.:x.....xx.x....x..::-::....xx.:xx..:x::x.x.:x...:.-..x.....x..x.:...:.:x:x.:.:.::...:::.x:..xx::.:xxx...:.x:.x:.x.....x...x..:..:.....x:xxx.x.---..:...x---...:..:.....:..:....x.....x.....x.:..:..xx.xxx.....x:.x.x:xxx........:..::........:xx:.x..x.:.:.x.x:...:..x.x:..:.x..... 43M1D29M1I91M3I7M3I120M 173/290 59.7% 297/94230402 0.0% 8/290 2.8% 14701384 NA +7336 chr4 + 190214555 67918967 67918966 67919265 299 ACCCACCACCATAGTAAAGTGCTCCAAATCCTGTGATGTGGACAGTCAAATTTGGTTGGAAGGATGCAGAGGCTTCTGGCAAACAAATCTGGCGTATGTCATCCGAAAAGGTGACTCTGGAAGAGACCTGCACAACAGCAATGTCGTACTCTCTTGCTGCAGAGCGGTACTTCTCATGGATAATAAATCTTCTGACATTTCTTTTCATTAAGGGAGGGTTGATTTTTGTTCCAAAACTAACAGTCCATTGATGTGGATTTTTATACCTGGAAAAGGTTAGAAATTAACAGAATATATAT chr4 + 94230402 53170071 53170070 53170369 53170071 53170070 53170369 299 ACTCACCATCATTGGTAAGCGCTCCCCAGCCTGTGATGACAGCATAAATATTATATGGAAAAGTCTGAGATGGCTCAGGCAGACAAACGCGGTGTATGTTACTTGTAAACTCAACTTGTTTAGAGAGCTTCACAAGTGCAATGTCATAATCGTGTTCTGGGTAGCGGTACATTTCGTGAATAATAATGGTCTTGACTGATCGTTTCAAAGTTGGTGGCTTCAAAAGAGCTCCAAAAGTAGCAGTCCACTTGTGAGGGTGACTCATTCTGAAAAAGGTAAGAGTGCTGTAAAATATTTGT ..:.....:...x.xx...:.....xx.x.........xx::..xxx.x...xx:.x.:..:.x:xx...x.x:..x....:.....:x:..:......:.:::.x...xx::...:xxxx.....x..x.....xx........:..x..x:x.x...x:x........x.:..:..:.......xxx.::....xxx..x.....xx:xx..x..x..x.xxxxx.:.......x..:.......:.x:..x..:.xx:.xxx:...:.......x...:xx:x::.:.....x.:. 299M 183/299 61.2% 299/94230402 0.0% 0/299 0.0% 14748896 NA +3216 chr4 + 190214555 67961420 67961419 67961541 122 ATGTTTCCCACCATTTCCTTTCTTTTTCCTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCT chr4 + 94230402 78259293 78259292 78259410 78259293 78259292 78259410 118 ATGTTTTTCATGTCTGCTTTTTCGTCTCCTTCCTTTGCTTTTCT----TTGCCTTCGCTTATGTCTCTCCTTATAATCTCATTTATTTATTTTAACCTTTTTTATTTAATGAGATGATGTCT ......::..:xx:.x.:...::x.:.....:....x.......----..x....:x...x.x::.:.::..x.xx.:.:x...x...x....xx::......x...xx.....:::x.... 44M4D74M 75/118 63.6% 118/94230402 0.0% 4/118 3.4% -10297873 -83932529 +3354 chr4 + 190214555 67961435 67961434 67961521 87 TCCTTTCTTTTTCCTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72383365 72383364 72383451 72383365 72383364 72383451 87 TCCATATCCCTCTCTCTTTTTCCCTTTCATCCCTTTCCTCTCCTTTCTCTGTGGTGGGTTTTTTTTTTTTTTTGTGCttttatattt ...x.x::::.::..:.:...:.:....x.:........:.:....::..x.xx.xxx...............x.x:....x.x... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% -4421930 -89808472 +3221 chr4 + 190214555 67961448 67961447 67961530 83 CTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 69568192 69568191 69568274 69568192 69568191 69568274 83 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTG .....:..x..x:..xx.:x......::.:.x.::..::.:.x.:.:....::.:x:..:xx.:................... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -1606744 -92623658 +3064 chr4 + 190214555 67961462 67961461 67961498 37 CTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTT chr4 + 94230402 76064718 76064717 76064754 76064718 76064717 76064754 37 CTTTCCTTTCCTTTTTTTTTCCCTCTTTTTTTTTTTT ...............:......:.:............ 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -8103256 -86127146 +8708 chr4 + 190214555 67991673 67991672 67991882 210 TGATTGTTGCATTAGATGTTAGTTTTAGATTTAATCCAGTCCCAATAATGAGTCACTTCGGTATAAAGTCCTGGCTTGTTTTATTTTCCACAGTCTATTCCCCAGCTTACTATTCCAACAAGGTACCAGGCATTTCTATCACGTGCAATAACCAGAGGACCTCCAGAATCACCCTGGA-AAAGAAGAAGAAAACAATACGGTCAATGTAAT chr4 + 94230402 53167739 53167738 53167949 53167739 53167738 53167949 211 TGATTTTGGAATTAGATGCCAGTTTTTGAGGTAATCCAGTCACGGAAATAAGTCACTCGTGTGTAAACTCCAGGTTTGTTTGGCTTGGCACATTCATCTCCCCAGCTCACTATTCCCACGAGGTACCACATCAGTCTAGAATCTGGAGTAACCAGCGGTCCCCCAGAGTCTCCCTGGAGAAAGAGGAGGGGGAAAAAAAAAACAATTTAAT .....x.x.x........::......x..xx..........x.::x...:.......:xx..:....x...x..:......x::..xx....x..xx:.........:........x..:........x::xxx....xx.:x..x.:.......x..x..:.....:..x.......-.....:..:.:::.x..x.x::x....x.... 178M1I32M 149/210 71.0% 211/94230402 0.0% 1/210 0.5% 14823934 NA +6861 chr4 + 190214555 67991684 67991683 67991858 175 TTAGATGTTAGTTTTAGATTTAATCCAGTCCCAATAATGAGTCACTTCGGTATAAAGTCCTGGCTTGTTTTATTTTCCACAGTCTATTCCCCAGCTTACTATTCCAACAAGGTACCAGGCATTTCTATCACGTGCAATAACCAGAGGACCTCCAGAATCACCCTGGAAAAGAAGA chr4 + 94230402 53216046 53216045 53216220 53216046 53216045 53216220 175 TCAGATGCCTGTTTTGGAAGCGATCCAGTCTCGATATGCAGTCACTCGTGTGTACACTCCTGGTTTATCAGCCTTGCCACATTCATCACCCCAGCTCACTATTCCCACGAGATACCAGATTCCTCTGGAATTTGCATGAACCAGTGGCCCACCAGAATCACCCTAAAGAGAAAAA .:.....::x.....:..xx::........:.:...xxx.......:xx..:..x.x......:..:.:xxx:..x.....x..xx:x........:........x..:..:......::x::...:xx.:x....xx......x..x..x.............::.:.::..:. 175M 117/175 66.9% 175/94230402 0.0% 0/175 0.0% 14775638 NA +6650 chr4 + 190214555 67997321 67997320 67997594 274 GAGATACTCACCATCTAATTTAAGTGCTCCCCATCCAGTGACAAACACTTTACTCTTAGGCAAGGCTTCAAAAGTAGCTTCTGGAAGACAGACTCTGTGCACCTCATTGGAAAATATGATGGGGGTGAAGAGCTTCACTACAGCGATATCATCCTCGTGTTTATGGGCAG------CATAGTTCTCATGAATAATAATTGACTCCCCCTTTCTTCTCATTAGTGAGGGATTCGGGTTA-TTCCAAAACTAGCCATCCAGAGTTTGGGTTTTTCTTCACTGA chr4 + 94230402 53217578 53217577 53217858 53217578 53217577 53217858 281 GAGACACTCACCATCATTCTTCAAAGCTCCCCAACCTGAGACAAAACAGGAAGTATTATCCCGTAATATGTAAGATGCTTCAGGAAGACAGACACTGTGCACATCACTTGTGAACTCAATAGAGGAGGCAAGTTCCACAAGAGCTATATCATACTCATGATCAGGGACAAAGCCATCGTATTTTTCATGAATGATAATTCTTCGGACATATTTTCTCTGTTTTGGAGGTCTCAACAGAGTTCCAAAGCTGGCAGTCCATCTCCGAGGTTCTCTTTCTCTGA ....:..........xxx:..x.:x........x..x.x......xxxxxx.x.x...xx.x:x:x.x::x...xx.....x...........x........x...:.x.x:..:x::..:.:..x.:x:..:.:...x.x...x.......x...:..x.:.x..:..:------.:..x..:........:......xx::xxx.x.x.:.....xx.xx..::..x:..::xxx.-.......:..:..x:....xxx::x:....:.::...x.... 170M6I62M1I42M 171/274 62.4% 281/94230402 0.0% 7/274 2.6% 14779743 NA +3015 chr4 + 190214555 67998475 67998474 67998513 39 TTTTCTTCTTTGGGTGTTTGTTTGTTTGTTTGTTTTTTG chr4 + 94230402 73021701 73021700 73021739 73021701 73021700 73021739 39 TTTTCTTCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTG .........x.....x...x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -5023226 -89207176 +3787 chr4 + 190214555 68015628 68015627 68015735 108 AATTAATAGATACTTACCATATGCCAAAAAATAAACAAGGAGACCAATCAGTATCACCAGAATCAACACAACAGCTCTGACAATAAGGGCAAACATCCATGGTTTCAG chr4 + 94230402 53197882 53197881 53197989 53197882 53197881 53197989 108 AGTTCTTGAAAACTTACCATATGCCAGAAAATAAACAAGGAGACCAATGGTGATGGCTGCTGCCAATGCTGTTCCAATAACAATTAGAGCAATTTTCCACGGCTCGAG .:..xx.::.x...............:.....................x:xx..x:.::xx::...::.x::xx.xx.:.....x..:....x:x....:..:.:x.. 108M 70/108 64.8% 108/94230402 0.0% 0/108 0.0% 14817746 NA +6006 chr4 + 190214555 68053930 68053929 68054171 242 AATCCAATCTCGATACTTAGTTACTCTGGTGTAGACTCCAGGTTTTTTGGGAAGTGCACATGATTGTCCCCAACTTACTATACCTACAATGTACCAGATGTCATGATTATCATAAACCAGAGGTCCACCAGAATCTCCCTG------AAATAAAAACATATTTTAAATTGTTAACTCTACTTTAATTCAGTGGGAAGGTATTGTA-ATCTGACGTTCACAGAGAAAAAAGGAAATTGGTACACAGACCA chr4 + 94230402 84945768 84945767 84946005 84945768 84945767 84946005 238 AATCCAATTTACATAGTTTGTTACTCTTGTATATACTCCAGGCTTGTTGACTCTGCCACAGCCATCTCCCCAGCTGATGACTCCATAAAGGTAAGAGATTTCATTTTTCTCACAGGCCAGAGGTCCACCAGAATCTCCCTGTGTTAAAAGTAAGGAAAGATTAT------TTAATTTGACAGAAAATCACTGGAAAAACAGTTTACATGTAAGATTCAGACTTAAAAAACAAAA-----ACAAAAACCA ........:.xx...x..x........x..:..x........:..x...:xxxxxx....xxxx.x......:..x.:x.:x..xxx..x...xx....x....xx..x...:.::.........................------..:...::.x.x...x.------....:.:x..xxx..x...x...:..:::.x.x..-..x.:.x:....x.xxx......x:...-----...x.:.... 141M6I17M6D35M1I28M5D10M 158/231 68.4% 238/94230402 0.0% 18/231 7.8% -16891838 -77338564 +6449 chr4 + 190214555 68059286 68059285 68059470 185 AACTTTCCTCATAAACTTTTGGCCTTGACTTTAAACTTACCTTACATGCATCTATTTTTCCTTCCATGAATCCAGCACATAACATTCCTGGAGTTATCAGGCCATCATACACATCCTTTCTGTTACACACATCAGTGCTTATGGTTTCCACTCTGGCTTGCCGAAGTGTATTTTGTATAGGTCCT chr4 + 94230402 53169158 53169157 53169334 53169158 53169157 53169334 177 AGTTTTCCTTTCTAATTTTCAGCTATGG--------TTACCTGACAAGCATCTACTCCTCCTTCCAAGTACCCAGCACACAACATCCTAGGTGTTATGTCCCCATCATACACTTCTTTTCTGTTGCAAGTGTCTGAGTCGATAAGTTTCACTGTTGCTTCCTGAAGAGCATTAGGAGTCGGACCT .::......:x:x..:...::..:x..:--------......x...x.......:.::........x.x.:........:.....:.:x..x.....xxxx...........x..:........:..x:::..x.x.::x..::x..:....x.x....x.:....x.:...xx.x:.x..x... 28M8D149M 120/177 67.8% 177/94230402 0.0% 8/177 4.5% 14890128 NA +6484 chr4 + 190214555 68059309 68059308 68059471 163 CTTGACTTTAAACTTACCTTACATGCATCTATTTTTCCTTCCATGAATCCAGCACATAACATTCCTGGAGTTATCAGGCCATCATACACATCCTTTCTGTTACACACATCAGTGCTTATGGTTTCCACTCTGGCTTGCCGAAGTGTATTTTGTATAGGTCCTA chr4 + 94230402 53216610 53216609 53216772 53216610 53216609 53216772 163 CTTAAGATGAGACTTACCTGGCAAGCATCCACCCGTCCCTCTAAGTATCCAGCACACAACATTCCTGGTGTTATTGCTCCAGCATACACTTGTGGTCTATTACAAACCGCAGTGCTAATAATTTTTACTTCTGCTTGTCGAAGCTGATTAACACTAGGGCCTA ...:.xx.x.:........x:..x.....:.:::x...:..:.x.x..........:...........x.....::xx...x.......x.x:xx...:.....x..xx.......x..::...::...::x.....:.....:xx...xxxxx....x.... 163M 112/163 68.7% 163/94230402 0.0% 0/163 0.0% 14842699 NA +3140 chr4 + 190214555 68060507 68060506 68060593 87 CTCCAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAGATATATTAACACTAGTTTTTTTTTCAGGATATCCTTGACAGAAACATAAGT chr4 + 94230402 90395524 90395523 90395610 90395524 90395523 90395610 87 CTTCACCTCAAAAAGAAAAAAAAAAAAAAAGAGTAATTATTACAAAAGTACATTATTTTCCTATATAGCGTTTAAAGAGATGTAAAT ..:..x........:...............:.:x.:x...xx:..x.x..xx..x....:.x:x...x.x..x.x...:.::...:. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% -22335017 -71895385 +3652 chr4 + 190214555 68073396 68073395 68073452 57 AGAAAAGAAGGAAGGAAGAAAAGGAGAAAGGGAAAGAAGGAGAGAGGGAGGAGAGAA chr4 + 94230402 24330661 24330660 24330717 24330661 24330660 24330717 57 AGAAGAGACAGAAGGAACAAAAGGGGAAGTGGAAAGGAGGAGAGGGGGAGAGGGGAA ....:...x:.......x......:...:x......:.......:.....::.:... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 43742735 NA +3098 chr4 + 190214555 68095756 68095755 68095838 83 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.--....:.:...........::........x.xx:x...x::.........:.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -7937441 -86292961 +3702 chr4 + 190214555 68107813 68107812 68107879 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...x.:...........:..x:xx:.....:.. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -7925398 -86305004 +3254 chr4 + 190214555 68114991 68114990 68115066 76 AAAAAAAAAAAAAAAAAAAAAAGAAGAAGAACAAGAAGAAAGCTTTCAACAAGCTAGGGATAGAAGAAAAGTTTCC chr4 + 94230402 92119554 92119553 92119625 92119554 92119553 92119625 72 AAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAAGCCATGGACGGGCCAGG----GAGGGAAAATTTCC ..............:...x......:::x.x::..:.......:x.x:..::..:...----..:.:...:..... 58M4D14M 52/72 72.2% 72/94230402 0.0% 4/72 5.6% -24004563 -70225839 +3245 chr4 + 190214555 68115334 68115333 68115394 61 GCAACAGAGCAAGACACCATCTCAAAAAAAAAAAAAAAAAAAAAAA--AAAGAAGAAGAAGAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ....x:..........x.x.........::.:..............--.x.....x.x..x.. 46M2I15M 50/61 82.0% 63/94230402 0.0% 2/61 3.3% -20267374 -73963028 +3248 chr4 + 190214555 68134676 68134675 68134778 103 TTGAAAGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCCTGCCACCCAAAAATACTATATCCAGCAAAA--TTATCCTTCATAAATG chr4 + 94230402 9731257 9731256 9731350 9731257 9731256 9731350 94 TTGGAGGT-TTAAAAAAACAAAAACAAAACAAACAAAAAAAAAACCATGAAACACCCTGC----------TGGGAAATGCAGAAGAATTTTAACATTCATAAGTG ...:.:..-.........x.....x....x...x..........xx.x:...........----------.:xx.x..x...x.:..--...x.x.......:.. 8M1D51M10D17M2I16M 72/92 78.3% 94/94230402 0.0% 13/92 14.1% 58403419 NA +3004 chr4 + 190214555 68135892 68135891 68135941 50 CAATTTACAATAACTACAAGAAAATATAATACATAGAAATAAATTTAACC chr4 + 94230402 70485410 70485409 70485459 70485410 70485409 70485459 50 CAATTTACAGTGGTTACAAGTAAATGTGATACATAAAGATAAAGATAACC .........:.:::......x....:.:.......:.:.....xx..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -2349518 -91880884 +3722 chr4 + 190214555 68137019 68137018 68137118 100 GCACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAACCAGAAGGCAGAGGTTGCAGTGAGCCGAGATCATGCCAA-CAGGTATAT chr4 + 94230402 76033206 76033205 76033300 76033206 76033205 76033300 95 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGT ....x.:..:.:...........::........x.xx.x...x........x.......x:xx:..:..:..------:.x..x.......-...:.:.:. 72M6D13M1I9M 69/94 73.4% 95/94230402 0.0% 7/94 7.4% -7896187 -86334215 +3111 chr4 + 190214555 68138361 68138360 68138431 71 ACACTGTTTTTTTG--TTTGTTTGTTTTTTGTTTTTTTTTTTTCAAGACAGATTCTCACTCTGTCGCCCAAGC chr4 + 94230402 71820545 71820544 71820617 71820545 71820544 71820617 73 ACACTGTGTTGTTGGGTTTGTTTGTTGTTTTTTTTTTGTCTTTAAAAATATATTTCCACTGAGAAGTCCAAGC .......x..x...--..........x...x......x.:...x..:.:.x...::....xx.xx.:...... 14M2I57M 54/71 76.1% 73/94230402 0.0% 2/71 2.8% -3682184 -90548218 +3025 chr4 + 190214555 68138368 68138367 68138402 35 TTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTTTC chr4 + 94230402 76801341 76801340 76801375 76801341 76801340 76801375 35 TTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTTTTC ..........................x........ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -8662973 -85567429 +3025 chr4 + 190214555 68138368 68138367 68138421 54 TTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTTTCAAGACAGATTCTCACTCTG chr4 + 94230402 53858857 53858856 53858910 53858857 53858856 53858910 54 TTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTTTTGCCTCATATATATACTCTG ..................x...............::xxx..x..x:x:...... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 14279511 NA +3259 chr4 + 190214555 68174949 68174948 68175031 83 CATGTTGGCACATGCCTGTACTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::x...::..:.--....x.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -7858248 -86372154 +7287 chr4 + 190214555 68184081 68184080 68184269 189 TTAAACACCCGTCTCAGAGGTAATCCAGTTGCAGTAGGTGGTCACTCACGTGTAGACCCCTGGACTATTGATTGCACCACATTCATTCCTTCCCCAGCTCACTACTCCAACAAGGTACCAAATATACCAAATATTTAGAGAATTAGGATGAACTAGTGGTCCTCCAGAGTCTCCCTGAATAAAAAAAAG chr4 + 94230402 53167750 53167749 53167926 53167750 53167749 53167926 177 TTAGATGCCAGTTTTTGAGGTAATCCAGTCACGGAAATAAGTCACTCGTGTGTAAACTCCAGGTTTGTTTGGCTTGGCACATTCATC---TCCCCAGCTCACTATTCCCACGAGGTACCACATCAGTC---------TAGAATCTGGAGTAACCAGCGGTCCCCCAGAGTCTCCCTGGAGAAAGAGGAG ...:.::..x..:.:x.............::.:.x.:xx:.......::.....:..:..x..x:.:..x:x:x::x.........:---..............:...x..:........x..xx::.---------x.....:x...xx...:..:.....:..............:.x...:.::.. 87M3D38M9D52M 124/177 70.1% 177/94230402 0.0% 12/177 6.8% 15016331 NA +5912 chr4 + 190214555 68185356 68185355 68185518 163 GCCAGAATTACCTGGCAGGCGTCTATATTTCCTTCCATGTACCCAGCACATAGCACTCTATCCTGTACCATACTACGATAGGCTTCTTTAGCATTACAAGTGTTTGTATCAGTAATCTTCACAGATGCTTTCTAAAGGAACACTAGGTGTT-TACCTAAAGGAA chr4 + 94230402 53169179 53169178 53169341 53169179 53169178 53169341 163 GCTATGGTTACCTGACAAGCATCTACTCCTCCTTCCAAGTACCCAGCACACAACATCCTAGGTGTTATGTCCCCATCATACACTTCTTTTCTGTTGCAAGTGTCTGAGTCGATAAGTTTCACTGTTGCTTCCTGAA-GAGCATTAGGAGTCGGACCTGAGGGAA ..:.x::.......:..:..:....:x::........x............:.:..::...xx:xx..:xx:x.:.:x...x:.......xx::..:.......:..x:..::...x:.....x.x.....:..:..-..:..:....x..:-x....:.:.... 136M1D14M1I12M 108/162 66.7% 163/94230402 0.0% 2/162 1.2% 15016177 NA +6397 chr4 + 190214555 68186980 68186979 68187244 265 AACTTAACACTTTAAAACAGTGAGCTGCAGTCACCAAGTGTCTTTCACTGATCAATGATGCCCCACAGTAGTGTTGCCCACTCATTTTAAGGCTTGCTTGTCATGGTCATTCTCCTTCCTGATCAATGGAACCTCCCCTGACTCTATCAA-----ATGTAGGTG---GCATCCTTGCTCGTCTCCCACAGCCTGTCAGAAAAAGTCAGTTTTGCTTCATTAAAAATAGGAAAATAACATTTGATTACAAAGC--AGAGAGTGAGCTGAGTTGGCT chr4 + 94230402 53218085 53218084 53218344 53218085 53218084 53218344 260 AACTTACC-CTTTAAAGCAGTGGGCTGCAGTCACTAGCCACGTATTACTGATCACCGACGCACCGCAGTAATGTGTCCCATCGAGCTGAATACTAGCCTGCCATGGCCATTCTCCATCCCGTGCACGCTGTCCATCAGTTATTCTTTCCACTCCTGTGAAGGAGAATGCCTCCTT--TCGTATTCCACAGACTGTCaaaaaaaaaaaa------------aaaaaaaaaaaaacaacaaccaaaaaaaaaCCCAACAAAGGCAGCTCTGTTAGCT ......x.-.......:.....:...........:.:x:::x.x.:........x:..:..x..:.....:...xx....::x.x:.x..x:..x..:..:.....:........x...:.xx..xxxx:x..x:.xx.x.:...x..x.-----:..x...x.---..x.....--....x.:......x......:.....:xx.:------------.....x.::....:....x:::.xx.x...x.--.x.:..xx....xx...:... 8M1D141M5I9M3I8M2D31M12D32M2I21M 169/250 67.6% 260/94230402 0.0% 25/250 10.0% 14968895 NA +3132 chr4 + 190214555 68193823 68193822 68193889 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTCAACCCAGGAGGGGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x:....x.......:..xxxx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -7839388 -86391014 +3178 chr4 + 190214555 68220315 68220314 68220397 83 CATGGTGGCACGCACCAGTAATCCCAGCTACTCTAAAGGCTGAGACAGGAGAATCACTTGAACTTGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....xx...:.:.........:x..........x.xx.x...x.........:::.:..x.xx::.:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -7812882 -86417520 +8363 chr4 + 190214555 68227822 68227821 68228094 273 TACCAACAATCAAAATAAAAAGATC-----CCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATAATTCCTTTTTTT---TCAGAGTCCAGTCTTGGATGTAATCCAATTGCGATAAGAAGTCACTCGAGTATAGACACCTGGCTTATTCTTTTTACCACATCCATCACCCCAGCTTACTATTCCAACAAGATGCCAGATATTTCTGGAATCAGGGTAAGCTAGTGGTCCACCAGAATCATTCTAGAAGAAGAAAAGAAAAAAA chr4 + 94230402 53167654 53167653 53167933 53167654 53167653 53167933 280 TACTAAAAAAAAAAAAAAAAAAACCTTCCACAAGACATACAGAGAATTATGAGTTAC-GTGTAACCTATGTAATTATATCCATTTTTGATTTTGGAATTAGATGCCAGTTTTTGAGGTAATCCAGTCACGGAAATAAGTCACTCGTGTGTAAACTCCAGGTTTGTTTGGCTTGGCACATTCATCTCCCCAGCTCACTATTCCCACGAGGTACCACATCAGTCTAGAATCTGGAGTAACCAGCGGTCCCCCAGAGTCTCCCTGGAGAAAGAGGAGGGGGAAA ...:..x..xx....x.....:.:.-----.x.:.xx:.....x..xx..::x:...-...xxx::.....xx:.x.:.x:.x..::xx....x---.:...xx.....:..x..x........:.::..:x..x..........x..:..:..x..x..:..:..:xx:..:x.....:....x........:........x..:..:.:...x..xxx...:.....x..:xx.:.:..:.....x.....:..x::..:..::....::..::::... 25M5I27M1D36M3I184M 177/272 65.1% 280/94230402 0.0% 9/272 3.3% 15060168 NA +9713 chr4 + 190214555 68227909 68227908 68228097 189 TTTCAGAGTCCAGTCTTGGATGTAATCCAATTGCGATAAGAAGTCACTCGAGTATAGACACCTGGCTTATTCTTTTTACCACATCCATCACCCCAGCTTACTATTCCAACAAGATGCCAGATATTTCTGGAATCAGGGTAAGCTAGTGGTCCACCAGAATCATTCTAGAAGAAGAAAAGAAAAAAATGT chr4 + 94230402 53216044 53216043 53216223 53216044 53216043 53216223 180 TTTCAGATGCCTGTTTTGGAAGCGATCCAGTCTCGATATGCAGTCACTCGTGTGTACACTCCTGGTTTATCAGCCTTGCCACATTCATCACCCCAGCTCACTATTCCCACGAGATACCAGATTCCTCTGGAATTTGCATGAACCAGTGGCCCACCAGAATCACCCT---------AAAGAGAAAAATGT .......xx..x..:.....x.::.....:.:x.....x.x.........x..:..x..x.....:....:xx::..:......:.............:........x..:....:......x::........:x.x:.:.:.:.....:............::..---------.....:........ 166M9D14M 138/180 76.7% 180/94230402 0.0% 9/180 5.0% 15011865 NA +3413 chr4 + 190214555 68231819 68231818 68231915 97 AAAAGATGTAACAGGACAGCGATATGCTCCTATAGGCCCAGCTACTTGGGAGGCTGAGGCAGGAGGACTGCTTGAGCCCAAGAGTTCCAGGCTATAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACA---CAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....xx...---...:.:.--..x.x.:...x:...........::........x.xx.x.:.x::.....:....::..:.:::....:... 13M3D7M2D72M 64/92 69.6% 92/94230402 0.0% 5/92 5.4% -7801367 -86429035 +3122 chr4 + 190214555 68238592 68238591 68238669 78 TGGCGAACGCTGGTAGTCCCAGCTACTTGAGAGGCTGAGGCGGGAGAATTGCTTGAATCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x...:--.....:............:........x.xx.x...x::......:.::.:..x:xx:..:..:.. 10M2D66M 53/76 69.7% 76/94230402 0.0% 2/76 2.6% -7794610 -86435792 +3125 chr4 + 190214555 68241683 68241682 68241755 73 ACTCACCAACTGCCAGAAAATGAACAAGAAGACCAATGGTTACTCCCAAGATTGCCGCCA------CTCCAAGAAAAAT chr4 + 94230402 53197893 53197892 53197965 53197893 53197892 53197965 73 ACTTACCATATGCCAGAAAATAAACAAGGAGACCAATGGTGAT------GGCTGCTGCCAATGCTGTTCCAATAACAAT ...:....xx...........:......:...........x.:------.::...:....------:.....x..x... 43M6D11M6I13M 54/67 80.6% 73/94230402 0.0% 12/67 17.9% 15043790 NA +3046 chr4 + 190214555 68242364 68242363 68242426 63 ATATATAATATTATATATATAATATATAATATATTATGTATTATATTATAAATACATAATATA chr4 + 94230402 68588541 68588540 68588603 68588541 68588540 68588603 63 ATAGATAATACTATTTAGGTCATGTAAAAGACATTATGTATTAAAATTTAAATGCAGAATATA ...x......:...x..x:.x..:..x..x.:...........x.x.x.....:..x...... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -346177 -93884225 +3382 chr4 + 190214555 68254960 68254959 68255014 55 CCCTGTCTCAAAAAAAGAAAAAACAAAGCAAAACAACAACAACAACAAAAAAAAA chr4 + 94230402 23069441 23069440 23069495 23069441 23069440 23069495 55 CTCTTTCTTGAGAAAGGGGAAAACAAAACAAACAAACAACAGCAACAAAAAAAAA .:..x...::.:...:.::........:....xx.......:............. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 45185519 NA +3014 chr4 + 190214555 68254963 68254962 68255017 55 TGTCTCAAAAAAAGAAAAAACAAAGCAAAACAACAACAACAACAAAAAAAAACCA chr4 + 94230402 4563800 4563799 4563854 4563800 4563799 4563854 55 TGTTTTCTAACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCA ...:.:xx..x..:......x...xxx.....:...................:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 63691163 NA +3046 chr4 + 190214555 68254970 68254969 68255014 45 AAAAAAGAAAAAACAAAGCAAAACAACAACAACAACAAAAAAAAA chr4 + 94230402 17617505 17617504 17617549 17617505 17617504 17617549 45 AGAAATGAAAGAGTAAAGAAAACCAACAACAACAACAAAAAAAAA .:...x....:.::....x...x...................... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 50637465 NA +3417 chr4 + 190214555 68275071 68275070 68275134 64 AAATATCACAGTTTGGAAACAATTTCTCTCTTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 6553993 6553992 6554056 6553993 6553992 6554056 64 AAATGCCATTGTATCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ....::..:x..x.x:.....:x..:x:.x..:...:...........:............... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 61721078 NA +3274 chr4 + 190214555 68275093 68275092 68275153 61 TTTCTCTCTTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTGTTTT chr4 + 94230402 56907966 56907965 56908026 56907966 56907965 56908026 61 TTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTT ....:::..::x::.........................:...xx.:..:..x...x.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 11367127 NA +3003 chr4 + 190214555 68275100 68275099 68275135 36 CTTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847282 45847281 45847317 45847282 45847281 45847317 36 CTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .....x.:............................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 22427818 NA +9380 chr4 + 190214555 68282432 68282431 68282672 241 TAAAAAAAAAATTATACTCATGAAGGGTTATATATGACTGTCTTCTATATATCGAGCAAAT-CTGTACTTGACTTTGTGCTCAAGTCCAATATAACAGCTGCTCCCTTGGCCTTCATGTGAGCAATGTTATCATGTTGGTCCGCAAACAAAGGAATGCCCA-TGGAGGGACTCCACGGTAGATCATCTCATAGATGCTATT-GTTCCACCATAAGTTATAAAGGCTTTGGTTTGGGGATGATCT chr4 + 94230402 53289430 53289429 53289672 53289430 53289429 53289672 243 TAATGGAAGAACAAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTG-TCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT ...x::..:..:x.x.....:.x..::..:.xx........x...xx.::...:.x:.:..-....:-.:.x.xx......x..:....::x:...x..x.....:..x...:............:...:.....:.....x.......x:.....x..x.-::xx....:....:....:..x:::........x.:...-..:.......:...x..:.....:..x.::x:......::.. 61M1I5M1D93M1I39M1I42M 168/240 70.0% 243/94230402 0.0% 4/240 1.7% 14993002 NA +3440 chr4 + 190214555 68337123 68337122 68337248 126 CATTTCCCTCCTCTTTCTGGTCTCTCTCATCCTGTTCATATTCTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCATCTTCATCCACCTCTTCATCTT chr4 + 94230402 34908133 34908132 34908255 34908133 34908132 34908255 123 CATGTTCATCTTCTCTACTGCTGTCATCAGACTGATCAAAATCATCGCTCTCCTGGTCCATTTCCTCCTC---CTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ...x.:.x..:...:.x:x.::x::x...xx...x...x.x..x..x:::....xx...x::........---...:...x..........:.xx..x:.xx...x......xx.x.....x.... 70M3D53M 80/123 65.0% 123/94230402 0.0% 3/123 2.4% 33428990 NA +3191 chr4 + 190214555 68337176 68337175 68337252 77 TCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCATCTTCATCCACCTCTTCATCTTCTTC chr4 + 94230402 34908174 34908173 34908250 34908174 34908173 34908250 77 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTC ..x..x::.....xx..:x::...............x....:......:x...x:..x.xxx:..x.....x..... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 33429002 NA +3021 chr4 + 190214555 68368424 68368423 68368466 43 AAAAAGAATTAAAAAAAAAAAAAAAGGAAAGAAAGGAAAAAAA chr4 + 94230402 41027788 41027787 41027830 41027788 41027787 41027830 43 AAAAAGAATGAGGAAAAAAAAAAAAGGAGAAAAAGGAGAAAGA .........x.::...............:.:......:...:. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 27340636 NA +3035 chr4 + 190214555 68372598 68372597 68372669 72 AAGCATGCTCCTTTCTAAAATTATATTCTAAAATGTTAAGAAAAAATACAAAAAAGGGCATTTTCAGAAAAT chr4 + 94230402 28007441 28007440 28007512 28007441 28007440 28007512 72 AAAAATGTTCATGTCTTTGATTGTATTTCAAAATAATAAAAAAAAGTACACAAAAGGGTGTATGTGGAGAAT ..:x...:..x.x...xx:...:....::.....:x...:.....:....x.......::.x.x::..:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 40365157 NA +3282 chr4 + 190214555 68403116 68403115 68403188 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATTTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x........::::.:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -7630089 -86600313 +3038 chr4 + 190214555 68412791 68412790 68412827 37 CAAAAAAACCCAAAAAACCAAAAACAAACAAACATAC chr4 + 94230402 56795198 56795197 56795234 56795198 56795197 56795234 37 CAAAAAAACCCAAAAAACCAAAAACAAACAAAACTAC ................................xx... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 11617593 NA +3294 chr4 + 190214555 68413583 68413582 68413657 75 GAGGGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGTGGAGAGGAAGGGGAAGGG chr4 + 94230402 84536553 84536552 84536624 84536553 84536552 84536624 72 GAATGAGGCCTTGTC---AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGG ..:x...:.:::...---..:::...:::...:.......x..x.....x........:...::..:.....:.. 15M3D57M 51/72 70.8% 72/94230402 0.0% 3/72 4.2% -16122970 -78107432 +3031 chr4 + 190214555 68417253 68417252 68417333 81 AATATATACATATATATATATACACACACACACGTATATATATATATATATATATACCGTATATATATATATATATATATA chr4 + 94230402 70020909 70020908 70020989 70020909 70020908 70020989 81 AACATAGTTATATACGTACCTACACACATGCATGTAATTTGACATAAATACACATGGAGCACACATATATTTGCATATATA ..:...xx:.....::..:x........::..:...xx.xx.:...x...:.:..:xx.:.:.:......x.::....... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -1603656 -92626746 +3063 chr4 + 190214555 68417260 68417259 68417335 76 ACATATATATATATACACACACACACGTATATATATATATATATATATACCGTATATATATATATATATATATATA chr4 + 94230402 58071367 58071366 58071442 58071367 58071366 58071442 76 ATATATATATGTATGCACACACATAGCTTAGTTCATTTATGTACATAATTCCTCTATATACATAGGTATAAATATA .:........:...:........:.xx.xx:.x:..x...:..:...xx:.x.x......:...x:....x..... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 10345893 NA +3065 chr4 + 190214555 68433025 68433024 68433091 67 TGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::.:......x.xx.x...x.:........::.:..x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -7600186 -86630216 +3310 chr4 + 190214555 68436757 68436756 68436816 60 CTCTTCCCTTAGTCCTTTGTTTTCTTTTTTCTCTTGTTTTCTTTTCTATTTTTTCTATTT chr4 + 94230402 10672517 10672516 10672576 10672517 10672516 10672576 60 CTCTCTCTTTTACCCCTGGCTTTTTTCTTTCTCTTGTTTCTTTTTCTATCCCCTCTATTT ....::.:..x::..:.x.:...:..:............::........::::....... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 57764240 NA +3967 chr4 + 190214555 68471224 68471223 68471400 177 TTTTCTTTTCTCTT---TTCTTTTCTTTCTCTCTCT---CTCCCTCTCTCTCCTTCCTCCCCTCCATTCCCTTCTCTTCACTTCCTTTTTCCTTTCCC--TTCTCCTTCCTTCCTTTTCTCTTTTCTTTCTTTCCTCCCTCCCTCCTTTCTTCACTTCCTCCTTCCCTCCCTCCCTCCCTCCCTT chr4 + 94230402 85792679 85792678 85792853 85792679 85792678 85792853 175 TTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTC----------TGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTT ...:x...:x....---..x.:..:..:..:.....---..:x....::x..x..xxxx:x...xx...x.....::..x..x..........x.x.x--..:.:.x.x:..:...:..xxx..:x.....:.x...----------.x.:..::.xx::............:.....::.:... 14M3I19M3I59M2I37M10D38M 110/167 65.9% 175/94230402 0.0% 18/167 10.8% -17321455 -76908947 +3450 chr4 + 190214555 68471267 68471266 68471363 97 CTCCTTCCTCCCCTCCATTCCCTTCTCTTCACTTCCTTTTTCCTTTCCCTTCTCCTTCCTTCCTTTTCTCTTTTCTTTCTTTCCTCCCTCCCTCCTT chr4 + 94230402 51335295 51335294 51335391 51335295 51335294 51335391 97 CTCCTTATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTT ......x:x:.::.:..x..x...xx.x.x.:.....xx..:..:x.xx.....x...::..:..x.:.:..:.:...:......:.:.:....:.. 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 17135972 NA +3080 chr4 + 190214555 68471303 68471302 68471375 73 TTTTTCCTTTCCCTTCTCCTTCCTTCCTTTTCTCTTTTCTTTCTTTCCTCCCTCCCTCCTTTCTTCACTTCCT chr4 + 94230402 45957266 45957265 45957338 45957266 45957265 45957338 73 TTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTCAGCTACT ......:.....:.:......:..x.::.x..x..x:.:..::..x..:..:..x:..::.:.....x:.x.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 22514037 NA +3268 chr4 + 190214555 68471378 68471377 68471451 74 TTCCCTCCCTCCCTCCCTCCCTTCCTGCCTTTCTTTCTTCTTTTCTTTTCTTTCTTTCATTTTCTTCTTTTTTG chr4 + 94230402 86518997 86518996 86519070 86518997 86518996 86519070 74 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTTCTG ..:.:..........:..:x:...xxx::.......:..:.........::.x....:.x:::..xx....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -18047619 -76182783 +3109 chr4 + 190214555 68478419 68478418 68478470 52 CAGGTGTAAGCCACCGCACCCGGTATCCCCCGCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42041341 42041340 42041392 42041341 42041340 42041392 52 CAGCAGTAAATGACTGCACCCGGTTACCACTGCTTTTTTTTTTTTTTTTTTT ...xx....::x..:.........xx..x.:..................... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 26437078 NA +7215 chr4 + 190214555 68509533 68509532 68509673 141 TACCTTAGGCAGGGTTTTGGCTGGTTTACAGTGGAGTTCCCCCACAAAATCGACATTTGGTAAGGGTGGGTGAAGAAATTCAAAATCCCAGTACGTTTGAATGAGCCACACTTCAGCTTTCCCCATTGTCTCAAATAATGT chr4 + 94230402 53292263 53292262 53292403 53292263 53292262 53292403 141 TACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGT ......x.....x.x:..x..x..:.x:.....:...:.:..x.....x..:.x:..x..:.:.::x...:..:...................:...:x:..x.....:.::..x.....:.....:......x.:.:... 141M 102/141 72.3% 141/94230402 0.0% 0/141 0.0% 15217270 NA +12157 chr4 + 190214555 68537616 68537615 68537927 312 TTGATATAACTAATCCCTTTTCTTCTTCTTTCCTGTTTTGGCAAGCTTTCGGAAACAAAACAGGCAACATTTTGTGATCATAAATATCATAGTTGCCACGCAGGCCAGCAGGAATGCTATCACATCCAAAGAGTGGTACTGGATCCAGGTGAGGTTGTGGGCTGCGACCCGAAGGTGCTTGGCTCCTTTATGGCGCATGACAAACTCAATCCAGAAGACTGCTCGATCCAGGGGCTTCACCGGTTGATCATGATGAATTCTTGATAATTTCATGATATTCTCTTTATAGCTGAAGGATAAATATAAAGATAT chr4 + 94230402 53288518 53288517 53288826 53288518 53288517 53288826 309 TCAATGTATCTATTC---TTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGAGAT .::..:..x...x..---......:......x:x::::.:x..x::....x:x.:.......x...:..:..x:::.xx..:..xx:x::.:.x..::.:...::x.:..:......:.xx.......::x...........xx......:..:.x...:..x..x:x:.xx.:......x........:..:...........:..............x....x:.....:.....x.::..:..:..:..:..x..::.x.....:..:.x:.:.:.:..:..:........::.x:..x:x..:..x.. 15M3D294M 204/309 66.0% 309/94230402 0.0% 3/309 1.0% 15249098 NA +3133 chr4 + 190214555 68540153 68540152 68540202 50 TACATATATACAGATATATGTGCAATATATATACACACACACACATATAA chr4 + 94230402 87329511 87329510 87329560 87329511 87329510 87329560 50 TATATATATACACGTATACTAGCAGTGTACATACATACACACACATATAA ..:.........x:....:xx...:.:..:.....:.............. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -18789358 -75441044 +11250 chr4 + 190214555 68550668 68550667 68550902 235 AATACTCACATAGGGTCATTAATGACTGACTTCAATGCATTGAGCAAATCTCTACTTGACATGGTCCTGATGTCCACACTGAGGGCTGCTCCCTTGGCTTTCATGTGAGCAATGTTATCATGTTGATCCGCAAACAAGGGAATGCCCACCATAGGGATCCCATGGTAGATTGCCTCATAGATGCCATTGGTTCCACCATGAGTTATAAAAGCTTTGGTTTTGGGATGACCTAAAA chr4 + 94230402 53289442 53289441 53289676 53289442 53289441 53289676 235 AAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCTGCAA ..x......:...::.::..........xx....x.....::.x:.:..:::xxx.:.x..xx..x....x:....xx:::.xx..x.....:..x..::............:...:.....:..:..x.......x......x..x.....x.....:........:..x..:........x........:...........x..:..:..:..x.::xx......:...:x.. 235M 169/235 71.9% 235/94230402 0.0% 0/235 0.0% 15261226 NA +4538 chr4 + 190214555 68551818 68551817 68551913 96 TCTTACCAAGAAGGTCATTCTGGGGTAACCACTTATACAGTCGAGTATTGGAACCTAAAGTATTTGGCTTCTTGCCATCAAATCTCCATAGAACCT chr4 + 94230402 53290396 53290395 53290491 53290396 53290395 53290491 96 TCTCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCT ...:......x........:.......x...x.:...x.x:.x:..:.....:..x.:..:x.:...:..:..:..x.::x...x...x..:.... 96M 68/96 70.8% 96/94230402 0.0% 0/96 0.0% 15261422 NA +3040 chr4 + 190214555 68557500 68557499 68557539 40 AAACATTGCTGATCCTTTGTTTTGTTTTGTTTTTTTTTTT chr4 + 94230402 71626689 71626688 71626728 71626689 71626688 71626728 40 AAACAATGTTGTTCCTTTGTTTTGTTTTGTTTTTCTTTTT .....x..:..x......................:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -3069189 -91161213 +6844 chr4 + 190214555 68560532 68560531 68560681 150 CTAACCTTTTGTGGGATCTGGGCAAGGGCTGATGCAATCATGTTGGCACTTTCTTCTGACATGTTACTGATCATCGACCCCAGAGAAAACACCACAATACCATTTTCTCCAGAGCTCTGCACAAACTCTTCCATTTCCTGTGAAGAAAGA chr4 + 94230402 53290865 53290864 53291014 53290865 53290864 53291014 150 CTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAA ..x..x........:.x....x::......xxx.......::..:x:x.....x::x.x:.x...::x..:...:.....x........:........:....x...:..x..:.....x.....:.....x.......:x..:.x.::. 150M 106/150 70.7% 150/94230402 0.0% 0/150 0.0% 15269667 NA +9944 chr4 + 190214555 68565550 68565549 68565741 192 AATGAAACAAGAATATGTTCACCTTAGGCAAGGGTTTGGCTGGTTTACAGTGAAGTCCTCCAACAAAATCAACATTTGGTAAGAATGGGCGAGGAAATTCAAAATCCCAATAGGTTCGAATGAGCCACATTTCAGCTTTCCCCATTGTCTCAAATAATGTAGTGGGTCTTCCTGATGGAAAAAAACAAAACA chr4 + 94230402 53292250 53292249 53292435 53292250 53292249 53292435 186 AACAAAGTCAGAATA------CCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTGTGGGCAAAGTACAAGGCA ..::..::x......------....x....:x..:..x..x..:.x:....................x....x:..x..:.:...x.......................:..x....x:..x.....:..:..x.....:.....:......x.:.:...x.....:.......xx..x...:x....::.. 15M6D171M 143/186 76.9% 186/94230402 0.0% 6/186 3.2% 15273300 NA +3085 chr4 + 190214555 68565568 68565567 68565678 111 TCACCTTAGGCAAGGGTTTGGCTGGTTTACAGTGAAGTCCTCCAACAAAATCAACATTTGGTAAGAATGGGCGAGGAAATTCAAAATCCCAATAGGTTCGAATGAGCCACA chr4 + 94230402 57836286 57836285 57836396 57836286 57836285 57836396 111 TTACTTCTGGCAGAGGGCTGGCCGGTTTGGTTAGGATTCCTCCCACATAAACAACATTCGGTAGCGTTGGTCTTGGAAACTCCAGCGCTATATCAGTACAAAGCATCCACA .:..:.:x....::..x:....:.....:xxxx.:.x......x...x..x.......:....:x:x...x.xx.....:..x.:xx.:xx..x:..x.:..xx.x..... 111M 69/111 62.2% 111/94230402 0.0% 0/111 0.0% 10729282 NA +11378 chr4 + 190214555 68567756 68567755 68568429 674 CTTACCTAGAACTTCACTATAAAACTGGTCCCACT-TCTTCAGATCATATGCTTGAAACCAAAAGTCAAAATAAAGCATAT-ATATCATATTTTTTATCCTCTCCATGAAAATCATTTGATCACTTAATTCTGACATAACAACAGGTACATAGGAAGGAGGGAACAGAAATCCTCCACCATTCTTCTCAACTGTGTAGCCAACAGAGAAGCGGAGACTGTACAGAAAGGGTATGTTAAGTAGCTCAGCCAGCAGCTCACCACAGGGATTAACGGCATCTGCCAGAAGGACATCAAATTTTGACTCTTGTAGTTTTCTCATAAGTTTCTTGT---TCAAAACTGCATCTTCACAGAGCTTTATATTATAGTCAGAATATTCC----CAACACAATTCTTGTAGTTGTGAAAAATATGACCAAAATGTATTTTTTGAAATACTATATGTCCATCTATCGAACATTTTCATAAA--AAAATCTTC---------------CAAATCATTTTTAGTTAAAGATGTAGGATAAACTTCTAATTTAATAGCAGATGATTTACTGGCATTGACAAGAATAGAAGCCGAAGATGTCAACACAATCACCTCATGACCCCTCTGAACAAGCTCTTCCAGGATTGTCTTCATATTTATCCAATGGCTGTATTCTGTGGGCCACACCAGCACCTTTCCACAACTCCCAGAGC chr4 + 94230402 53297397 53297396 53298070 53297397 53297396 53298070 674 CTTACCTAAAATATCACTGTAGAATTGATTCCAATGTCCCCAGAGAACGTAATGGTATGCGAGGTCCTG--CAGAGCATAGGAGAACATGTTTTTTAGCCTCTCTGTGAAGGTCATCTTGTCTGTTAGGGAGCTTAGGCTGGCTGGCACGTAGGAAGGAGGTGCTGGGAGCCCCCCGCAGAGCCGCTCCACAGTGTTGCCCATGGAGAACCGGATGGTGTACACCAAAGGGATACCCAGCTTCTCTGCAAACAGCTCCCCGCTGGGCATCAGTGGGTCTGCCAGGAGGACATCAAAGGCAGATGTCCTCAGCCTTTCCAGCAGCACCTTGTCCTTCAAAACTGCATCG-CAAATGGTTCTG-GTTATATTCTCAAACTTGCGTAGCAGATCAATCATC----TTGTAAAGACTTTCCCAGAAAGGTAACCTTC-------------TCTCCTCATAGAAC-----CAAAAATAGAAACCTTCATCCATTGCGGCAGCCATCTCACTTTTGCTGATTGGCACCTCAATCATCTCAAACTGGAAAGGTGAGGGCTGGGTGCCATTGAGGATAAGGAAGCACGAAGGCAGCAGCACAGTCACCTCATGGCCCCGGGCTACAAGTTCGTGCAGGATATACTCCACGTTGAGCCAGTGGCTGTTGTCAACTGGCCAGACCAACACCTTCCCACCATACACGGAGC ........:..:x.....:..:..:..:.:...x.-..::....xx.::.:x.x.x.xx.:.::x:.x:--:.:......x-.x.x...:.......x......::....::....:.x:..xx...:xxxxxx:.x:x:::.x..:..:...........x:x::.:.::..:..:.x:xx.:x...x..x....x...x.::.....x....x:x......xx..:..x..:::x..:xx...x..x.:......x..:.x...xx.x.xx.x:........:...........xx:x..:x:::x:..::..::..xx..:x:.....---.............x-..x.x:.:.:.:-:.....x..xx..xx..x.----..:xx....:x.:----....:..:.x.x.xx.x:...x...x::..:-------------..:x:::..x....-----..x...--:...:....---------------..xx...:....:x.x.xx.::::xxx.xxx.::..x..:.x:.x..xx..x.::.x:x..x......x:.x..x::.:xx.....:::x..:....:..........:....xxxxx.....:..x.x......xxx..:..::..x.x...:.......xx..x::x.....x....:......:....x.:x.x.:.... 35M1I33M2D10M1I249M3I14M1D12M1D19M4I13M4D31M13D14M5D6M2I9M15I203M 393/648 60.6% 674/94230402 0.0% 52/648 8.0% 15270359 NA +6654 chr4 + 190214555 68626841 68626840 68626981 141 TACCTTAGGCAGGGTTTTGGCTGGTTTACAGTGGAGTTCCCCCACAAAATCGACATTTGGTAAGGGTGGGTGAAGAAATTCAAAATCCCAGTACAGTTGAATGAGCCACACTTCAGCTTTCCCCATTGTCTGAAATAATGT chr4 + 94230402 53292263 53292262 53292403 53292263 53292262 53292403 141 TACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGT ......x.....x.x:..x..x..:.x:.....:...:.:..x.....x..:.x:..x..:.:.::x...:..:...................::x.:x:..x.....:.::..x.....:.....:....x.x.:.:... 141M 99/141 70.2% 141/94230402 0.0% 0/141 0.0% 15334578 NA +6278 chr4 + 190214555 68628183 68628182 68628859 677 CTTACCTAGAACTTCACTGTAAAACTTCTCCCACTTCTCGTATCAAACATT-TGAAACCAAAAGTC------AAAATAA-AGCACATGTATTAAATTTTTAATCCTCTCCACGAATGTCATTTTACCACTTAATTCAGACAGAACAGCAGGTATGCGGGAAGTGGGGAATAGAAGTCCTCCACTATACTTCTCAAGTGTGTAGCCA--GGAGACTGTCAACAAAGGACATGTATTTAACATGCCTTTAACATGCTCAGCTAGCAGTTCACCAC-AGGCACCAAGGGCATCTGCAAGAACGACATCAAACTTTGACTCTTGTAGTTTTGTCGTAATTTTCTTGT---TCAAAACTACATCTTTACAGAGATTATTAACACAGTCTG--TAGATTCCCAAAAGAGTTCTTGTG---------------CTTGTGAGAAATATGACCAAAATGCATCTTTCT--------------GAAGATCGTA-TATCCATCTATTGATCAGTTTCACAACAAGACCCTCAAAATTATTTTTAATTAGAGATGTTGGATAAACCTCAAATCTAATAGCAGATGATT---TACTAGGGTGAATAATAATGGAAGC-CAAAGATGACAGCACAGTCATCTTATGGCCTCTCCAAACAAGTTCATCCAGGATTGTCTTTATATTCATCCAATGGCTGTATTCTGTGGGCCACACTAGCACCTTTCCACAACTCCCAGAAC chr4 + 94230402 53297397 53297396 53298070 53297397 53297396 53298070 674 CTTACCTAAAATATCACTGTAGAATTGATTCCAATGTCCCCAGAGAACGTAATGGTATGCGAGGTCCTGCAGAGCATAGGAGAACATGT-------TTTTTAGCCTCTCTGTGAAGGTCATCTTGTCTGTTAGGGAGCTTAGGCTGGCTGGCACGTAGGAAGGAGGTGCTGGGAGCCCCCCGCAGAGCCGCTCCACAGTGTTGCCCATGGAGA-----ACCGGATGGTGTACACCAAAGGGATACCCAGC-TTCTCTGCAAACAGCTCCCCGCTGGGCATCAGTGG-GTCTGCCAGGAGGACATCAAAGGCAGATGTCCTCAGCCTTTCCAGCAGCACCTTGTCCTTCAAAACTGCATC---GCAAATGGT----------TCTGGTTATATTCTCAAA------CTTGCGTAGCAGATCAATCATCTTGTAAAGACTTTCCCAGAAAGGTAACCTTCTCTCCTCATAGAACCAAAAATAGAAACCTTCATCCATTG----------CGGCAG--CCATC----TCACTTTTGCTGATTGGCACCTCAATCATCTCAAACTGGAAAGGTGAGGGCTGGGTGCCATTGAGGATAA----GGAAGCACGAAGGCAGCAGCACAGTCACCTCATGGCCCCGGGCTACAAGTTCGTGCAGGATATACTCCACGTTGAGCCAGTGGCTGTTGTCAACTGGCCAGACCAACACCTTCCCACCATACACGGAGC ........:..:x........:..:.xx.:...x.x::.x:.xx:...:.x-..:x.:xx:.:...------.:x...:-..x......-------....x.x......:::...x.....:..::.xx...:xxx:xx:..:x::..x..:.:.::.....x:..x:x.:.:..:..:..:.x:x:.:x...x.xx....x...x--.....-----.x.::.x.:::.::.::x..x:x::x:::.:.-.x...x..x.:...:..x..:.-:....:..:x..-:.....x..:.x.........xx:x..:x:::x:..::..x:.:xx.x:x:.....---........:....---:..:.x:x.----------....--..x....:....------....:.---------------.....:.::.x.x.xx.x:...x.:.x.:....--------------:..:..x.x.-:x.:....:....----------.::..:--..x..----.:.:....:x.x.xx.:::::xx.xxx.:......::x:.x..xx..x.::.---.:.:.xx.x.:....----......-.:...::::...........:..:......:.xxxxx........:.x......xxx..::.::..x.x...:.......xx..x::x.....x..:.:......:....x.:x.x.:..:. 51M1I14M6I7M1I9M7D110M2I5M5D32M1D22M1I12M1D56M3I13M3D9M10D4M2I12M6D6M15I33M14I10M1I13M10D6M2D5M4D52M3I15M4D6M1I122M 377/624 60.4% 674/94230402 0.0% 103/624 16.5% 15330786 NA +12946 chr4 + 190214555 68647095 68647094 68647406 312 TTGATATAACTAATCTCTTTTCTTCTTCTTTCCTTTTTTGGCAAGCTTTCGGAAACAAAACAGGCAAAATTTTGTGATGATAAATATCACAGTTGCCACGCAGGCCAGCAGGAATGCTATCACATCCAAAGAGTGGTACTGGATCCAGGTGAGGTTGTGAGCTGCGACTCGAAGGTGCTTGGCTCCTTTGTGGCGCATGACAAACTCAATCCAGAAGACTGCTCGATCCAGGGGCTTCATTGGTTGGTCATGATGAATTCTTGATAATTTCATGACATTCTCTTTATAGCTGAAGGATAAATATAAAGATAT chr4 + 94230402 53288518 53288517 53288826 53288518 53288517 53288826 309 TCAATGTATCTATTCT---TTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGAGAT .::..:..x...x...---.....:......x:xx:::.:x..x::....x:x.:.......x...:x.:..x:::.x:..:..xx:x:..:.x..::.:...::x.:..:......:.xx.......::x...........xx......:..:.x......x..x:x..xx.:......x...........:...........:..............x....x:.....:.....x.....:.....:..:..x..::.x.....:..:.x:...:.:..:..:........::.x:..x:x..:..x.. 16M3D293M 211/309 68.3% 309/94230402 0.0% 3/309 1.0% 15358577 NA +11137 chr4 + 190214555 68654028 68654027 68654262 235 AATACTCACACAGGGTCATTAATGACTGACTTCAATGCATTGAGCAAATCTCTACTTGACATGGTCCTGATGTCCACACTGAGGGCTGCTCCCTTGGCTTTCATGTGAGCAATGTTATCATGTTGATCCGCAAACAAGGGAATGCCCACCATAGGGATCCCATGGTAGATCGCCTCATAGATGCCATTGGTTCCACCATGAGTTATAAAAGCTTTGGTTTTGGGATGACCTAAAA chr4 + 94230402 53289442 53289441 53289676 53289442 53289441 53289676 235 AAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCTGCAA ..x......::..::.::..........xx....x.....::.x:.:..:::xxx.:.x..xx..x....x:....xx:::.xx..x.....:..x..::............:...:.....:..:..x.......x......x..x.....x.....:........:..x..:........x........:...........x..:..:..:..x.::xx......:...:x.. 235M 168/235 71.5% 235/94230402 0.0% 0/235 0.0% 15364586 NA +4416 chr4 + 190214555 68655089 68655088 68655184 96 TCTTACCAAGAAGGTCATTCTGGGGTAACCACTTGTACAGTCGAGTATTGGAACCTAAAGTATTTGGCTTCTTGCCATCAAATCTCCATAGAACCT chr4 + 94230402 53290396 53290395 53290491 53290396 53290395 53290491 96 TCTCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCT ...:......x........:.......x...x.::..x.x:.x:..:.....:..x.:..:x.:...:..:..:..x.::x...x...x..:.... 96M 67/96 69.8% 96/94230402 0.0% 0/96 0.0% 15364693 NA +6844 chr4 + 190214555 68663003 68663002 68663152 150 CTAACCTTTTGTGGGATCTGGGCAAGGGCTGATGCAATCATGTTGGCACTTTCTTCTGACATGTTACTGATCATCGACCCCAGAGAAAACACCACAATACCATTTTCTCCAGAGCTCTGCACAAACTCTTCCATTTCCTGTGAAGAAAGA chr4 + 94230402 53290865 53290864 53291014 53290865 53290864 53291014 150 CTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAA ..x..x........:.x....x::......xxx.......::..:x:x.....x::x.x:.x...::x..:...:.....x........:........:....x...:..x..:.....x.....:.....x.......:x..:.x.::. 150M 106/150 70.7% 150/94230402 0.0% 0/150 0.0% 15372138 NA +3149 chr4 + 190214555 68664251 68664250 68664306 56 AATGTATTCTCACACCAAAAAAAAAAAAAGAGAGAGAGAAAGAGGAAAAGAAATGT chr4 + 94230402 53933638 53933637 53933689 53933638 53933637 53933689 52 aatGTA----CAGACTTAAAAAAAAAAGAGAGAGAGAGAAAGGAGAAAAAGAATGT ......----..x..:x..........:..............::.....::..... 6M4D46M 44/52 84.6% 52/94230402 0.0% 4/52 7.7% 14730613 NA +3168 chr4 + 190214555 68667144 68667143 68667180 37 CTTTACTTTTTTTTTTTTTGTTTATTTGTTTGTTTTT chr4 + 94230402 69082524 69082523 69082560 69082524 69082523 69082560 37 CTTCACTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTT ...:...................:............. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -415380 -93815022 +3338 chr4 + 190214555 68668036 68668035 68668146 111 TTACCTTAGGCAGGGGTTTGGCTGGTTTACAGTGAAGTCCTCCAACAAAATCAACATTTGGTAAGAATGGGCGAGGAAATTCAAAATCCCAATAGGTTCGAATGAGCCACA chr4 + 94230402 57836286 57836285 57836396 57836286 57836285 57836396 111 TTACTTCTGGCAGAGGGCTGGCCGGTTTGGTTAGGATTCCTCCCACATAAACAACATTCGGTAGCGTTGGTCTTGGAAACTCCAGCGCTATATCAGTACAAAGCATCCACA ....:.:x.....:..x:....:.....:xxxx.:.x......x...x..x.......:....:x:x...x.xx.....:..x.:xx.:xx..x:..x.:..xx.x..... 111M 71/111 64.0% 111/94230402 0.0% 0/111 0.0% 10831750 NA +10156 chr4 + 190214555 68668037 68668036 68668209 173 TACCTTAGGCAGGGGTTTGGCTGGTTTACAGTGAAGTCCTCCAACAAAATCAACATTTGGTAAGAATGGGCGAGGAAATTCAAAATCCCAATAGGTTCGAATGAGCCACATTTCAGCTTTCCCCATTGTCTCAAATAATGTAGTGGGTCTTCCTGATGGAAAAAAACAAAACA chr4 + 94230402 53292263 53292262 53292435 53292263 53292262 53292435 173 TACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTGTGGGCAAAGTACAAGGCA ......x.....x..:..x..x..:.x:....................x....x:..x..:.:...x.......................:..x....x:..x.....:..:..x.....:.....:......x.:.:...x.....:.......xx..x...:x....::.. 173M 136/173 78.6% 173/94230402 0.0% 0/173 0.0% 15375774 NA +9953 chr4 + 190214555 68669890 68669889 68670563 674 CTTACCTAGAACTTCACTATAAAACTGGTCCCACT-TCTTCAGATCATAAATTTGAAACCAAAAGTCAAAATAAAGCATATG-TATCATATTTTTTATCCTCTCCATGAAAATCATTTGATCACTTAATTCTGACATAACAACAGGTACATAGGAAGGAGGGAACAGAAATCCTCCACCATTCTTCTCAAATGTGTAGCCAACAGAGAATCGAAGACTGTACAGAAAGGGTATGTTAAATAGTTCAGCCAGTAGCTCACCACAGGGATTAAGGGCATCTGCCAGAATGACATCAAACTTTGACTCTTGTAG---TTTCATCATAAGTTTCTTATTCAAAACTGCATCTTTACAGAGCTTGTTACTGTAGTCATAATATTCCCAACACAATTCTTGTAA-------------TTGTGAAAAATATGACCAAAATGTA---TTTTTTGAAACACCATATATCCATCTATCGAGAATTTTCAGAAGAGAATCTTCCAAATAATTTTTAGTTAAAGATGTAGGATAAACTTCTAATTTAATAGCAGATGATTTACTGGCATTGACAAGAGTAGAAGCCGAAGATGTCAACACAGTCACCTCATGACCCCTCTGAACAAGCTCTTCCAGGATTGTCTTCATATTTATCCAATGGCTGTATTCTGTGGGCCACACTAGCACCTTTCCACAGCTTCCAGAGC chr4 + 94230402 53297397 53297396 53298070 53297397 53297396 53298070 674 CTTACCTAAAATATCACTGTAGAATTGATTCCAATGTCCCCAGAGAACGTAATGGTATGCGAGGTCCTG--CAGAGCATAGGAGAACATGTTTTTTAGCCTCTCTGTGAAGGTCATCTTGTCTGTTAGGGAGCTTAGGCTGGCTGGCACGTAGGAAGGAGGTGCTGGGAGCCCCCCGCAGAGCCGCTCCACAGTGTTGCCCATGGAGAACCGGATGGTGTACACCAAAGGGATACCCAGCTTCTCTGCAAACAGCTCCCCGCTGGGCATCAGTGGGTCTGCCAGGAGGACATCAAAGGCAGATGTCCTCAGCCTTTCCAGCAGCACCTTGTCCTTCAAAACTGCATC---GCAAA---TGGTTCTG-----GTTATATTCTCAA----ACTTGCGTAGCAGATCAATCATCTTGTAAAGACTTTCCCAGAAAGGTAACCTTCTCT----CCTCATAGAACCAAAAATAGAAACCTTCATCCATTGCGGCAGCCATCTCACTTTTGCTGATTGGCACCTCAATCATCTCAAACTGGAAAGGTGAGGGCTGGGTGCCATTGAGGATAAGGAAGCACGAAGGCAGCAGCACAGTCACCTCATGGCCCCGGGCTACAAGTTCGTGCAGGATATACTCCACGTTGAGCCAGTGGCTGTTGTCAACTGGCCAGACCAACACCTTCCCACCATACACGGAGC ........:..:x.....:..:..:..:.:...x.-..::....xx.::x.x.x.x.xx.:.::x:.x:--:.:......x.-x.x...:.......x......::....::....:.x:..xx...:xxxxxx:.x:x:::.x..:..:...........x:x::.:.::..:..:.x:xx.:x...x.xx....x...x.::.....:..:.x:x......xx..:..x..:::x.::xx:..x..x.::.....x..:.x...xx.x..x.x:........:.x.........xx:x..:x:::x:..---..:..x..xx.x:..x.:x..............---:..:.---..x.x...-----:.x......:...----.:.:x:...:-------------....:..:.x.x.xx.x:...x...---..:.:.----.x:....x.x...xxx..x..:.x:..:xxxx.xx.x:x.xx...xx.x.:....:x.x.xx.::::xxx.xxx.::..x..:.x:.x..xx..x.::.x:x..x......x:.x.:x::.:xx.....:::x..:...............:....xxxxx.....:..x.x......xxx..:..::..x.x...:.......xx..x::x.....x..:.:......:....x::x:x.:.... 35M1I33M2D11M1I228M3I33M3D5M3D8M5D13M4D10M13I25M3I6M4D246M 385/653 59.0% 674/94230402 0.0% 42/653 6.4% 15372493 NA +11725 chr4 + 190214555 68704589 68704588 68704886 298 ATGTAACTAATCCCTTTTCTCCTTCTTTCCTGTTTTAGCAAACTTTCAGAAAGAAAACAGGCAACATCTTGTGATGATGAAGATCACAGTTGACACATAGGCCAGCAGGAACCTAATCACATGCAAGTTGTGGTATTGGAACCAGGTGAGGTCGTGGGCTGCAACCCGAAGGTGCTTGGCTCCTTTGTGCTGCATGACAAACTCAATCCAGAAGGCTGCTTGATCCAGGGGCTTAATTGGCAAATCATGGCGAATTATTGATAACTTCATAGCATTCTCTTTGTAGCTGAAGGATAAA chr4 + 94230402 53288521 53288520 53288815 53288521 53288520 53288815 295 ATGTATCTATTC---TTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAA .....x...x..---.....::......x:x::::..x..x.:....x:x.:x......x...:..::.x:::.x:......x:x:..:.x.x::..:..::x.:..:...:x:x.xx....x..:.:x......:...x.......:..:.x...:..x..x:x:.xx.:......x...........x:..........:............:.x...:x:.....:............x::..:...:.x..:x.x........:.x.:..:.:..:...........::.x:.. 12M3D283M 198/295 67.1% 295/94230402 0.0% 3/295 1.0% 15416068 NA +9093 chr4 + 190214555 68708642 68708641 68708857 216 ACTCACACAGGGTCATTAATGACTGTCTTCAGTGCATTGAGCAAAT-CTGTACTTGACATGGTCCTGATGTCCA----CATTGAGG--------GCCTTCATGTGAGCAATGTTATCAGGTTGATCTGCAAACAAAGGAATGCCCACCATAGGGATCCCATGGTAGATTGCCTCATAGATGCCACTGGTTTCACCATGAGTCATAAAAGATTTAGTTTTTGGATGACCT chr4 + 94230402 53289445 53289444 53289672 53289445 53289444 53289672 228 ACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTG-TCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT ......::..::.::...........x....x.....::.x:.:..-....:-.:.x..xx..x....x:....----x.:..x:.--------...:............:...:...x.:..:..x.......x:.....x..x.....x.....:........:..x..:........x...:....::..........x..:..:.x:..x.::xxx.....:... 46M1I5M1D21M4I8M8I135M 158/215 73.5% 228/94230402 0.0% 14/215 6.5% 15419197 NA +3304 chr4 + 190214555 68710036 68710035 68710122 87 TTACCAAGAAGGTCATTCTGGGATATCCACTTGTACAGCTGAGTATTGGATGCTAAAGTATTTGGTCTCTTTCCAT-------CCACAGAACCT chr4 + 94230402 53290398 53290397 53290491 53290398 53290397 53290491 94 TCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCT .:......x........:....:......x.::..x.x.:x:..:.....xx.x.:..:x.:....:.:..x..x.-------...x..:.... 76M7I11M 61/87 70.1% 94/94230402 0.0% 7/87 8.0% 15419638 NA +3050 chr4 + 190214555 68710735 68710734 68710792 58 CTTTTCTTTTCTTTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTGAGATGGAGTCT chr4 + 94230402 80127507 80127506 80127564 80127507 80127506 80127564 58 CTTTTTTGTTCCTTGTTCTTTTCTTCCTGTTTACTTTCTTTTTGCTGTCATGGAGTCT .....:.x...:..x..........:..x.:.x:...:.....x:..xx......... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -11416772 -82813630 +3081 chr4 + 190214555 68739071 68739070 68739141 71 TTTGTTTTGTTTTGTTTTGCATGAAGAAAAAAAGGCTGCTTGTCTCTACTCTGCCATTTTGGAACCAGAAG chr4 + 94230402 46849964 46849963 46850034 46849964 46849963 46850034 71 TTTATTTTTATTTGTTTTGAGTCAAGAAAGGACAACTGTGTTTCTCTCCATTGCCCCTTTCAAACCAGAAG ...:....xx.........x:.x......::.x::...:x.x.....x.x:....x:...x:......... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 21889107 NA +3496 chr4 + 190214555 68739767 68739766 68739849 83 TCTCAAAAAAATTATACATATATATATATATATATATATATATATATATATATTGTGTGTGTGTATATATATATAGTGTGTAT chr4 + 94230402 6841111 6841110 6841189 6841111 6841110 6841189 79 TCTTGAAAAAATTGTGCATATACATATATTCATACTTACATATATATAAAT----TGTGTAAGTACATACACAGAAAGCACAT ...::........:.:......:......x:...:x..:.........x..----.....:x...:...:.:.x.:x.:::.. 51M4D28M 57/79 72.2% 79/94230402 0.0% 4/79 5.1% 61898656 NA +3054 chr4 + 190214555 68739797 68739796 68739842 46 TATATATATATATATATATATATTGTGTGTGTGTATATATATATAG chr4 + 94230402 22934832 22934831 22934877 22934832 22934831 22934877 46 TATATACATACATATATATATAGTGTGTGTGTGCATATAGAGAGAG ......:...:...........x..........:.....x.x.x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 45804965 NA +3490 chr4 + 190214555 68765967 68765966 68766038 72 CTCCAACTTCTGTTTCCTCAGCATCATCTTTTCTTTTCTTTCTTACTAGTTTTATCCTGCCTTTATTCTTTT chr4 + 94230402 62204760 62204759 62204831 62204760 62204759 62204831 72 CTTCCACTTCTGTTTCCTCAAAATCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTT ..:.x...............:x...x....:::..x....:...x..xx....x::..x.:........x.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 6561207 NA +3224 chr4 + 190214555 68777175 68777174 68777251 77 AGTCAAAGAAACACAGA---TTCAGCA--GGAAAAAAAAAACAAAACCAAACACACACACACACACACACAGAAGACATTCA chr4 + 94230402 82391608 82391607 82391689 82391608 82391607 82391689 82 AATCAGAAAAACGTGAAGCCTTCAGTACTGACTGAAAACACCAAAAACAGACACACACACACATACACACAAAAGGTATTTA .:...:.:....::::.---.....:.--.:xx:....x.x.....x..:.............:.......:...::...:. 17M3I7M2I53M 56/77 72.7% 82/94230402 0.0% 5/77 6.5% -13614433 -80615969 +3235 chr4 + 190214555 68792815 68792814 68792864 50 TTTTTGAATACATATATTCACACACACGCAGACACACACACACACACACA chr4 + 94230402 66743629 66743628 66743678 66743629 66743628 66743678 50 TTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACA ...x.:....x...:..::....x...x...:.................. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 2049186 NA +3694 chr4 + 190214555 68796012 68796011 68796125 114 AAGGAAAAAAAAGAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAA------------ACAGAAAGAAAGAAAAGAAAGCGAA chr4 + 94230402 24042726 24042725 24042850 24042726 24042725 24042850 125 AAGGAAACATTAGGCAACAGTAG-GAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAAA .......x.xx..:x:.x..x.:-..:x......:x:....x.:x...::..:....:x.....:x...:...:.:...x.:.x.....------------.......x...x...:......:.. 23M1D65M12I25M 79/113 69.9% 125/94230402 0.0% 13/113 11.5% 44753286 NA +3257 chr4 + 190214555 68796013 68796012 68796126 114 AGGAAAAAAAAGAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAG----AAAGAAAGAAAGAAAACAGAAAGAAAGAAAAGAAAGCGAAA chr4 + 94230402 78266968 78266967 78267085 78266968 78266967 78267085 118 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAACATTATGAAAACAAAA .:.....x.....xx...:....:..xx...:::::.....:.......:......x.xx..::xx...x...----...:x..xx...xx...x...x:..x:xx.x....:.:... 73M4I41M 75/114 65.8% 118/94230402 0.0% 4/114 3.5% -9470955 -84759447 +3184 chr4 + 190214555 68796025 68796024 68796158 134 AAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAA-----CAGAAA--GAAAGAAAAGAAAGCGAAAGAAAGAGACTTAGCTTTATATTATCAAGTGCT chr4 + 94230402 34175637 34175636 34175774 34175637 34175636 34175774 138 AACAAATAAAAGACAGAAAGAAAACACTAAAAATAGGAGAAGATAAGAAGTAGAAGAAAAGAAGTAAAGAATGACACATTGTCAGAAACTTGAAGAATGATCAGTCCTAGAAAG---CTTCCCTGTACCTCTTCAAGTGCT ..x...x......x.........:x.xx...:.x..:.::.:.x..::.:x::..........:x......x..x.x-----......--x:.....x::xx..:xxx......---...xx..x..:x.:x......... 77M5I6M2I24M3D24M 88/131 67.2% 138/94230402 0.0% 10/131 7.6% 34620388 NA +3592 chr4 + 190214555 68796055 68796054 68796201 147 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAACAGAAAGAAAGAAAAGAAAGCGAAAGAAAGAGACTTAGCTTTATATTATCAAGTGCTCAAAATATATTTTATATTATTGAG-------CAAGATAATGTATTAATAA chr4 + 94230402 38078778 38078777 38078929 38078778 38078777 38078929 152 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGA--AAAAAAAAAACCCATAAGCATGACCTACCTACTACTGCAAGTATGTGTTTTATTCTTGAGAGATATTAAGGGTAATAGAACAATAA ..x......:.::............:.:::.......x.x...::..:x.xx.x.:......x::.--:...:...:.xx.x..:x:x.:xx:..:.x.x.:..xx..:...:.x..x....x.....-------x.:.:....:x.x:..... 66M2D60M7I19M 92/145 63.4% 152/94230402 0.0% 9/145 6.2% 30717277 NA +5947 chr4 + 190214555 68834210 68834209 68834398 189 ACTGACTTTTTGTGGAATCTGAGCCAGGCCTGAAGTGATAAGATCAACCTTTTCTTCTGTAAGGTTTTGCACAACTGACTCCAGAGAAAACACAACAACACCATCCTCATCAGAGCTCTGGACAAATTCTTCCATTTCCTA-----CAGAGGAAAAACTTTCTTCATTATAAAGATGCAATGCCACATAGAATA chr4 + 94230402 53290864 53290863 53291056 53290864 53290863 53291056 193 ACTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAAGGCATACTAACGGTAATCACAAAATGC-ATGTTACACAGATTA ...x..x..........x...:x:x...x..xx:.::..x.x..:.x:::....x::x..x.....x.:x..x.:....:.x........:..x....::....x:..x:.x..:.....:...........x........-----....:.:x.x...xx.xx:.x.xxx..:....-...::...:...x.. 141M5I32M1D15M 126/188 67.0% 193/94230402 0.0% 6/188 3.2% 15543346 NA +12189 chr4 + 190214555 68861320 68861319 68861625 306 TTGATATAACTAATCCTTTTTCTCCTTCTTTCCTGTTTTGACAAACTTTCAGAAACAAAACAGGCAATATTTTGTGATGATGAATATCACATTTGCCACACAGGCCAGCAGGAACCCAATCACATCCAAAGAGTGGTACTGAAACCAGGTGAGGTCACGGGCTGCAACCCGAAGGTGCTTGGCTCCTTTGTGGCGCATGACAAACTCAATCCAGAAGACCGCTTGATCCCGGGGCTTCGTTGGCTGATCATGATGAATCCTTGATAATTTCAAAGCATTCTCTTCATAGCTAAGGATAAACAGAAA chr4 + 94230402 53288518 53288517 53288820 53288518 53288517 53288820 303 TCAATGTATCTATTC---TTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAA .::..:..x...x..---.....::......x:x::::.:x..x.:....x:x.:.......x...::.:..x:::.x:.....xx:x:..x.x..::.....::x.:..:...:x.x.xx.......::x..........:x.......:..:.x::.:..x..x:x:.xx.:......x...........:...........:..............x...:x:...x.:.....x:.......:..:..:..x...:.x.....:..:...:..:.:..:.::.....:.::.x.:.x..... 15M3D288M 202/303 66.7% 303/94230402 0.0% 3/303 1.0% 15572802 NA +3032 chr4 + 190214555 68870297 68870296 68870340 44 TCAACTTAAAATTTATATATATACATATATATATATATATATGT chr4 + 94230402 23477844 23477843 23477887 23477844 23477843 23477887 44 TCAACTTAGAATATATACACATACATATATAAATATATATTTGT ........:...x....:.:...........x........x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 45392453 NA +3414 chr4 + 190214555 68870313 68870312 68870420 108 ATATATACATATATATATATATATATGTATATATACACATATATATGTGTGTGTATATATATA------------------TGTGTATGTGTGTGTATATATGTGTATGTGTGTGTATATATATGA chr4 + 94230402 63788529 63788528 63788651 63788529 63788528 63788651 123 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATAAAGTGCTTTGTAATTGGAATTCTGTAAAACTGTGCATTTA---GTGTATGTGGGCAAATATATGA ........x..x.xx..xx:...:..:....:...x...x.....:x..............x.------------------.x....x:xx....:..x..---..:.:....x.:.x........ 63M18I20M3D22M 78/105 74.3% 123/94230402 0.0% 21/105 20.0% 5081784 NA +3447 chr4 + 190214555 68870323 68870322 68870445 123 ATATATATATATATATGTATATATACACATATATATGTGTGTGTATATATATATGTGTATGTGTGTGTATATATGTGTATGTGTGTGTATATATATGATATATATGA-----TATATATGATATATGA chr4 + 94230402 89812969 89812968 89813096 89812969 89812968 89813096 128 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTAAGAAAAATGA .....x...x....:.......x..x.:::x.xx..:::....:.x.:x:x:...:......x:x...:.:.:.......:.:...x..x..x.xx::.x.x.....-----:..:..x..x.x.... 107M5I16M 79/123 64.2% 128/94230402 0.0% 5/123 4.1% -20942646 -73287756 +3081 chr4 + 190214555 68870360 68870359 68870414 55 TGTGTGTATATATATATGTGTATGTGTGTGTATATATGTGTATGTGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..:...:...:.::...:...:.......x:x::....:......:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 13175906 NA +9219 chr4 + 190214555 68877624 68877623 68877906 283 TTCTTTTTTTTCTTTCTTGTCTTAACAAACTTTTGATAATCAAACAAGGAACATATTATGAAAAAAGAGTAAA-AATTGCCTCGCAG------------GCCAGCACAACCAGAGAGCAGTGCTGGAACCAGATGAGGTTTTTCGCAGGTGGCGGCAAGTACTTGGCTCCTCTGTGGCGCATGACAAACTTGATCCAGAAGACTTTTTGGTCCATGGGCTTCATAAGCTGATCATAATGAATGACCGATAACCATATAACATTCTCTTTACTGCTAAAGGAAAATCAAATAGACAT chr4 + 94230402 53288531 53288530 53288826 53288531 53288530 53288826 296 TCTTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGAGAT .::..:.........x.x::.:..x..x.:...:x.:.::x.....x.x.:..:x.x.::.:..x::..:x.:-...x..:x.:...------------.....x...x....:x..::..:....x.....:.:..:.xx.xx....x...:xx.....:...x......:....:...........:.::...........xx:.:x.....x:.....x..x:....:..:.::..x..xx:x......:x..x....:.:..:..::x...:..::..:.xx:..x:..x.. 73M1I13M12I197M 183/283 64.7% 296/94230402 0.0% 13/283 4.6% 15589093 NA +4660 chr4 + 190214555 68879908 68879907 68880134 227 GAGTCATTAATGACTGCTTTTCATGCATTGATCAAATC--TATAGTTGACATTGTTTTTGAGTCTACTCTAACAG----CTTATGCCTT-AGCCTTCATGTGAGCAAACTTATCAGGTTAATTTACAAACAAAG-AAGGCCCACCACAGGGATCCCATGGTAGATCCTCTCATAGGTGCCATTGGCTCCACCATGAGGTATAAAAGCTTTGGTTTTTAGATGACCTAGGATTACA chr4 + 94230402 57814222 57814221 57814449 57814222 57814221 57814449 228 GGATCATTAATAACTTTTTCTAGTGCTTCATACAATTCACTCTCAGTGACAGTCTT-------CCAGTTCAACAATATTCCCATGCCTTTGGCCTGCACTCGGGTCATAGTATCGTAATGGTCTCCGAAAAGGGGAATTCCCACCACTGGGACCCCATGGTACATGGTTTCAAAAATGCTGTTCAAACCACCATGACTAAGAAAAGCTTTTATGTTAGGGTGACCTGGAAATATA .::........:...x:..:.x:...x.::xx...x..--.x.x:x.....x.x..-------.:.x.::....:----.::.......-:....x..:x:.:.:x.xxx....:x:x.::.:.x.:..x.::.-..xx........x....:.........x..xx.:...x.::...::..x:xx.........xxx.x.........x:.x..x:.:......:.:.x..:. 38M2I16M7D12M4I10M1I44M1I100M 139/220 63.2% 228/94230402 0.0% 15/220 6.8% 11065686 NA +9780 chr4 + 190214555 68900640 68900639 68900919 280 AACAGACCTACTCTCTTTTCCTTCTTTCTCATCTTAACAAACTTTTGATAATCAAGCAT-CATAGTATGACAAA---GAGAGTAACAAGAGCTGTGCAG------------GCCAGCACATCCAGAGAGCAGTACTGAAACCAGGTGAGCTTGTGGGCAGGTGGCAGCAGGTACTTGGCTCCATTGTGGTGCATGACAAATTCAATCCAGAAGAGTTTTTGGTCCAAGGGCTTCAGAGACTGATCATAATAAATGATTGATAACTACATAACATTCTCTTTACAGCTAAAGGAAAA chr4 + 94230402 53288520 53288519 53288814 53288520 53288519 53288814 295 AATGTATCTATTCTTTCTTT-TTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGA ..::x.:...:...:.:..:-......x.x.:.:..x..x.:...:x.:.::x..:...-..xx::x......:---..::x:.:...x:....::...------------.....x........:x..::......:x.......:..x.x...:....x...:xx..:..:...x.....x.....::........................xxx:.:x.....::.....x.xx.:...:..:.::.:x..xx.x.......x:.x....:.:..:..::....:..::..:. 20M1D38M1I14M3I22M12I185M 188/279 67.4% 295/94230402 0.0% 17/279 6.1% 15612120 NA +3340 chr4 + 190214555 68910139 68910138 68910244 106 AATTGAGGAGATGTGGAGAGAAAAAGAGACATAAAAACAAAAGATAGAAAGAGAGAGAGAGAAGCGGAGAGGGAACATGTTGTTTCCAAC---AGAACTTTGAAAGTTA chr4 + 94230402 43459374 43459373 43459482 43459374 43459373 43459482 109 AATAAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAGTGAATCACCAGTTAATAAGTAACATAAGAATTTGGAAACTTA ...x:....:..:...x:.:.....:.:.xxx..x..x..x....x..:................:.x..:xx.x..xx.x:.xxx:...---....:..x....x... 90M3I16M 72/106 67.9% 109/94230402 0.0% 3/106 2.8% 25450765 NA +11182 chr4 + 190214555 68914917 68914916 68915221 305 TACAGCTAATCTCTTTTTCCCTTCTTTCCAGTTCTAGCAAACTTCCAGACACAAAACATACAACATTTTGTGATGATAAATATCACAGTTGCCACATAGTCCAGCAGGAACCCAATCATATCCAAAGAGTGGTACTGGAACCAGGTGAGGTCACGGGCTGCAACCTGAAGGTGTTTGGCTCCTTTATGGCACATGACAAATTCAATCCAGAAGACTGCTCGATCCAGGGGCTTCACTGGTTGATCATGATAAATTCTTGATAACTTTATAATGTTCTCTTTATATCTGAAGGATAAATGTAGAGA chr4 + 94230402 53288522 53288521 53288823 53288522 53288521 53288823 302 TGTATCTATTCTTTCTTT---TTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGA .::.x...x...:.:...---......x:::::...x..x.:..:.x:xx:........:..:..:..x:::.x:..:..xx:x:..:.x..::..:..x:x.:..:...:x.x.xx.:.....::x...........x.......:..:.x::.:..x..x:x::xx.:...:..x........:..:.:........................x....x:.....:.....x.:...:..:..:..:.:x..::.x..........x..:::.:..:..:..x.....::.x:..x.x.::.. 18M3D284M 195/302 64.6% 302/94230402 0.0% 3/302 1.0% 15626395 NA +5886 chr4 + 190214555 68924611 68924610 68924747 137 TTCTGCGGCATCTTGGCAAGAGCTGATGCAATTATATTGGTCCTTTCTTCTTTCATGTTACTGACCATTAACCCCAGAGAAAACACTACAACACCATTTTCTCCAGAGCTCTGGAAAAACTCTTCCATTTCCTGTGA chr4 + 94230402 53290871 53290870 53291007 53290871 53290870 53291007 137 TTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGA ..:..:..x.x..x.x::..:...xxx.....:.:...:x.:.....x::xx.:.x...::x.......:....x........:..:....::....x...:..x..:.....:.x...:.....x.......:x.. 137M 94/137 68.6% 137/94230402 0.0% 0/137 0.0% 15633740 NA +17755 chr4 + 190214555 68929811 68929810 68930767 957 ATCTATTCCCTCTTTTCTATCTTTCTAGTTTTATTAAATTTTTGACAGGAAAATAAAAAACATTTTGTGAACAAGAATATAGCAGTTGCCACACAGGCCAGCAGGAACCCAATCACATCTATAGAGTAGTGCTGGAACCAGGTGAGGTCATGGGCAGCTGATCGCAGGTGCTTGGCTCCTTTGTGGCGCATGACAAACTCGATCCAGAAGACTGCTCGATCTAGGGGCTTTACAGGTTGATCATGGTGAATTCTTGATAATCTCATAGCATTCTCTTTATAACTG----------GAAGGGA-------------------AAAACACACAT-----------------------AGAACTTAGAAAGTTGTAGTTTTGTTTTCATAAAAGACAGGTAGATAAAC-----------------------------CGTAGTATATGTTATGCAAGCC----------AAG--AACATGTTCAGTAAAAGAT---------TGATTCTGGTT---------------GTGACATGAATATTGTT----------GGTTACATAGT----ATTAAACAGATATAGTGGAGAGACTGA-AAGAG--------TATATTCTTAACAAAATGGGGTAAAA-------------TTAAGATGTGAAT--AAAAGCTTAGTAAGCCAGTTGTTAACTTAAA-----CCTAATA----------------TTTCCATGAAGAAAGTTTGACACTC--TATGAACTACAATTTCCACAACTATTCCAGTAACAAGGTGATGAATGACTCAATATTGTGGAGTAAAA----------TCCCTCA-ACATGTCTACCAGGATGATATTTAACATTTTCTGGT------------ATAATGTATAACATAGTCAATGTTAG-----------ATCAGTCTGTACAAGCAGTAGTACTTACGAGGAATCGGTAATGACTGTTCTCAAAGCCCTCAGTAAATCTTCGCTTGTCATAGTTTTGAAGTTTATTTCTACAGCTGCTCCTTTGGCCTTCATGTGAGCTATGTTATCAAGCTGATCACCAAATATGGGAACTCCCACCATAGGGACCCCATGGTAAATAGCTTCATAGATCCCATTCATTCCACCATGAGTGATAAAAGCTTTGGTTTTGGGATGACCT chr4 + 94230402 53288525 53288524 53289672 53288525 53288524 53289672 1148 ATCTATTCTTTCTTTT---TCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGAGATTTGTCACTGATTTCTGAAACAACCCATTCCACAACTGGCTGTTGTTTTGAGGAAGGTAGAAAGCTGTGCTTTTACTTTCGTCAATATTACATAAAAATATTTGAAACCAGCCCAGTTTATTCCTATCTGCACAGAACTTGAGATACAAACTTTAATAGAGAAAGTCAATCTTTGCAAAGAAAAATTATGCCAAATGATTCCAATTACTCTGTAAAAAAAAGTGACGTAAACTTTTTTACATCTGTTCAGGTACATCGCTACAATAACCTAAGGATACTGGAGGCTCAGATAAGAGAACTGTGATGGCTCCATACAGAGAATAGATAAAACAACTTTGCACTGTCATGCAGTGTATCCAAAGAATT--TATGCTAGCAGTGAACACAGAATCATCCTGGGAGTTGCTCCGGAGCTATCTTTCTCAAAGGAATCTTAAAATGCAATACAAGGTAGAATTGCTGGTCTCTCTTTTCTGAGAAGATGCTGA------------TATTTAGTAAAGATTTGTTTTTTCTCTAAGACCCGAGTGCCA----GCTATTCGATATTTTGAGTTCCCAGAAGAGTCAGCATGTCTCACATCAGCAGCCCAAGGTTTAAATAGCATCACTCTAATGGAAGAACAAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT ........::......---.....x.:::::..::.x.....:x....x....:.x:x.:..:..x:::.:x.x...xx:....:.x..::.....::x.:..:...:x.x.xx.....:.x:x...:..:....x.......:..:.x:..:.......:..x..:......x...........:...........:..:...........x....x:..:..:.....x.:x..:..:..:.....x..::.x.....::.:.x.:..:.:..:..:..:...----------...:...-------------------...xx..x...-----------------------:...xx.......:...:x....::....:.x..x:x:.x:..:.x.x.:-----------------------------.::..x.:x..xx..:...:.:----------...--..:x.x.x..:x:...:..---------......:::..---------------.....:.:..:x..x..----------:.x.....x.:----..x.xx:.::x...x.....:xx.x..-.....--------.:xx.:.x..xx:.:.xx:.:.....-------------.:.x.xx...x..--...::x..--..x..:..:x..x...x:.:.-----...::x.----------------:..:.x::...:..x:..:.x.:x.--..::.:x..x....x.::xxx::x:.::xx.:.x...:..x...------------.:.xx......:----------..:..x.-..x:.xx.:...----.x....::.:.....xx.x.------------.xx....x.x....x:x..::x:x..-----------....x...:xxx:.:x.::.:x...:...x:....:.x..........x:...xx..x::x.x..:..::.xxx.:....xx..x:....:.::.x:..x..x..x........x...:..........x.:...:...x....:...x....:.......::..x.....x....::.............................x:.:...........:..:..:..:..x.::xx......:... 16M3D266M10I7M19I11M23I50M29I22M10I3M2I19M9I11M15I17M10I11M4I27M1I5M8I26M13I13M2I8M2D21M5I7M16I25M2I44M12D12M10I7M1I12M4D20M12I26M11I250M 612/936 65.4% 1148/94230402 0.0% 233/936 24.9% 15641286 NA +7440 chr4 + 190214555 68930549 68930548 68930769 221 GAATCGGTAATGACTGTTCTCAAAGCCCTCAGTAAATCTTCGCTTGTCATAGTTTTGAAGTTTATTTCTACAGCTGCTCCTTTGGCCTTCATGTGAGCTATGTTATCAAGCTGATCACCAAATATGGGAACTCCCACCATAGGGACCCCATGGTAAATAGCTTCATAGATCCCATTCATTCCACCATGAGTGATAAAAGCTTTGGTTTTGGGATGACCTAG chr4 + 94230402 57814222 57814221 57814442 57814222 57814221 57814442 221 GGATCATTAATAACTTTTTCTAGTGCTTCATACAATTCACTCTCAGTGACAGTCTTCCAGTTCAACAATATTCCCATGCCTTTGGCCTGCACTCGGGTCATAGTATCGTAATGGTCTCCGAAAAGGGGAATTCCCACCACTGGGACCCCATGGTACATGGTTTCAAAAATGCTGTTCAAACCACCATGACTAAGAAAAGCTTTTATGTTAGGGTGACCTGG .:...:x....:...x..:::.:x..:::xx::..x..x::x::x..x.:...:..xx....:.x:xx..:xx.:::x..........x..:x:.:.::..:x....:x:x..:..x..:..x.x.....:........:x..............x..:.:....x.:..x.::....xx.........x.:.x.........x:.x..:..:......:. 221M 139/221 62.9% 221/94230402 0.0% 0/221 0.0% 11116327 NA +4554 chr4 + 190214555 68931150 68931149 68931257 108 CCTACCAAGAAGATCATTCTGGGGTATCCAATCATACAGCCGAGTATTGGCTCCTAATGTGGATGGTTTTTTTCCTTTGTACCTCCATAACACCT--ACGGAAGAAACAC chr4 + 94230402 53290397 53290396 53290506 53290397 53290396 53290506 110 CTCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCTTGAACAAAGGaacac .::......x..:.....:...........:.....x.x..x:..:....xx..x.:x.:xxx.........x........:.x...x.:x....--.xx:...:..... 95M2I13M 78/108 72.2% 110/94230402 0.0% 2/108 1.9% 15640753 NA +6884 chr4 + 190214555 68932622 68932621 68932771 150 ACTGACCTTCTGTGGGATCTGGGCAAGGGCTGAAGCAATGATATTAGCCTTTTCTTCTGTAACATTTTGAAACAGTGACCCCAGAGAAAACACCACAATACCATCTTCCCCTGAACTCTGGACAAAATTTTCCATTTCCT-GAAGATAAAA chr4 + 94230402 53290864 53290863 53291014 53290864 53290863 53291014 151 ACTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAA ...x..x..:.....:.x....x::......xx:.....x.:....x:::....x::x..x.x:..x.::.x..x......x........:........:....x...............:.....x.:...x.......-.:..::.:.. 140M1I10M 109/150 72.7% 151/94230402 0.0% 1/150 0.7% 15641758 NA +3111 chr4 + 190214555 68935250 68935249 68935315 66 AAGGAGGTGTGTATGTATGTATGTATGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094145 70094144 70094210 70094145 70094144 70094210 66 AAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..:x.x......x...x...x...........:......x.:.xx.x:...x........::.:.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -1158895 -93071507 +9932 chr4 + 190214555 68945303 68945302 68945456 154 TACCTTAGGCAAAGCTTTGGCAGGTTTACAGTGCAATCCTCCAACAAACTCAAAGTTAGGTTGGTATGGTTGAGGAAATTCAAAATCCCAATATGTTCGTATTAGCCATATCTCAGCTTTTCCCACAGTCTCACATAATGTAGTGGGCCTTCCT chr4 + 94230402 53292263 53292262 53292416 53292263 53292262 53292416 154 TACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCT ......x....:x.x:..x.....:.x:.....x.:.....................:..:x..x.x..x:...................:.......xx..............x..........:x........:.:...x............ 154M 127/154 82.5% 154/94230402 0.0% 0/154 0.0% 15653040 NA +3193 chr4 + 190214555 68945588 68945587 68945665 78 GGAAGGGGGAATTAATGAAA--TAATAAAG-----AAGAAAAAAGAAAGAAAGGAAAAAAGAAGGAAGGACAGAGAAAGAAAGGA chr4 + 94230402 4411703 4411702 4411787 4411703 4411702 4411787 85 gaaaggagaaaggaaagaaaaCTGGGAAAGGCACCAAGAAAGATAACAGAAAAAAATGAAGGAGAAAGGATAGAGAAAGAAAGGA .:....:.:..xx..x....--.::x....-----......:.x:.x.....::..x:...:..:.....:.............. 20M2I8M5I50M 58/78 74.4% 85/94230402 0.0% 7/78 9.0% 64533885 NA +3270 chr4 + 190214555 68945590 68945589 68945670 81 AAGGGGGAATTAATGAAATAATAAAGAAGAAAAAAGAAAGAAAGGAAAAAAGAAGGAAG--GACAGAGAAAGAAAGGAGGGAA chr4 + 94230402 49044726 49044725 49044808 49044726 49044725 49044808 83 AGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:..::..:....x....x..x....:x......x........:....:..x:.:.x..--:..x....xx:::.:....... 59M2I22M 57/81 70.4% 83/94230402 0.0% 2/81 2.5% 19900864 NA +3439 chr4 + 190214555 68945679 68945678 68945769 91 GGAAGGAAGGAAGGATGGAGGGAGGGAAGGATGGAAAGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGG-----AAGGAAGGAGCAAAGGACAGA chr4 + 94230402 1500702 1500701 1500797 1500702 1500701 1500797 96 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaagga .....::.:...:.:...:....:.:.:x..x..:...:.....::..:x.:.:....:..:..x:::..-----.x.:::...::......x:.. 70M5I21M 58/91 63.7% 96/94230402 0.0% 5/91 5.5% 67444977 NA +3130 chr4 + 190214555 68948377 68948376 68948475 99 GCTAATGCCAAAACCTAAGGTGATGTTGTGGTTGGTTTAATTTTTTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTGGTAGTGGTTTTGCTC chr4 + 94230402 2999866 2999865 2999954 2999866 2999865 2999954 89 GCTGCTGGAGAAACCTGCAGTGATATTTAAGTGGATTTCCTTTTGCTTGCTTGCTCTTTTTTTTTTTTTTTCTTT----------TGGTTGTCTTGCTC ...:x..xx:......:x:.....:..xx:..x.:...xx....x:..x:..x..:......:........:...----------.:..x..:...... 75M10D14M 62/89 69.7% 89/94230402 0.0% 10/89 11.2% 65948511 NA +6884 chr4 + 190214555 68951041 68951040 68951697 657 CTTACCTAATGCCTTACTATAA---------AACTCTTCCCAAAAA---TGATAGTCGTAATCCTGAATCCAGAAGTGGAACAAAACTGAAAGCATTGAATTTTTTACTCTTTCCAGAAAGGTCATTCTGTCTGTTAGTCCTGTCATAGGCACAGGTACATAGGAAAGTGGAGCTGGAAGTTTCCCACAGCTTCGCTCCATATTGCCTCCTACAGAAATTCTAAGTGTGAGCACAAAAGGGACTGCAAGCAACTCAGCCATCAGGTCTCCACAGGGAATCACAGGGTCTATAAGCATTACATCGTAGTTGGTTTCCTGTAGCTTCTTCATAAGCGTCTGATTGTAGATAAAGCTCTCACACATC---------------------ATTTTTAAAGTTCCTCTTATTTCAACAAAAAAATCATTTAATTTTATAACTGATTGCCAGGTTGATAAGCC----TGGCAAGACATTCAGAGCTAGGTCAACAAATATTTCATTTTCTTCTGTTCTGTCCTGTGGCATATGGACCACCTCAAATTTCAATGCAGAAGGCTT--CCTGTAGTCAATTAACGAAGG---CTTTGAGTGAGTCAATACTGTTACCTCATGGCCTCTCACTATGAGCTCTTCTAGAATGACCTTGACATTAAGCCAATGGCTCATGTCACAGGGCCACACCAGGACTTTCCCACAGAA chr4 + 94230402 53300225 53300224 53300890 53300225 53300224 53300890 666 CTTACCCAAGATCTTGCTGTAGTAGATGTCCCATTCTCCCCAGTAGCTCTGGAAAATGTAGTCTTGCA------AGTG--ATAAGACAGGAT-------ATTTTTAATTCTCTCGCCAAAGGACATGTGGTCAGTGAGCTCAGACAGGGCCGCAGGTGTGTAGGATGGTGGGGCTGGGATCTTGCCACAGTGCCTCTCAACAGTCGAGGCTGGAGAGAAGCGCAGGGAGTACACAAAAGGCAGTGCCAGCTTGAGAGCTACGAGGTCCCCGCATGGAGTCACTGGGTCTGACAGCAGCAGGTCGTAGCCAGAGCCCTGCAGATGGGCCATCAGCTCCTGGTTGGTCAGCACTGCATCGCACATCTGCCTGTTGACCTGGTGCCAGCTTTTGGACAGTTTCCCCAGCTCCTTGTAAAACTGCCAGAAGGTCGAAGCTGTTGGCC-TGTTGTTCAGCCATAACGTCATGATGTCTTCAATCAGGTTTGCAATGGTGTC--TTTCTTGAAG----------GGCACGTTATAGACCTCAAACTTC---TCGGTGGTCTCAGCCTTTGGCTGAATGAAGAGGGAAGCATTGGACA--CCAGGATGGTAACGCTGTGCCCACGGCGGATGAGCTCCTGAATAACCATCTTCACGTTTAGCCAGTGGCTGCCCTCCGTTGGCCAGACCAGCACATTCCCACAGAA ......:..x::...:..:..:---------x.:...:....:x.:---..:x.:x:...:..:..x.------....--.:..:..x.:.x-------......x.:...:..xxx.....x...x:x...x..x..::.x.x..x:.x.:.....:::.....x:....:.....:.x:..x......:x:.x...x.:.x.xxxxx..:x...:.xx.xx..x.x.x:.........x.x...x...xxxxx...:.:x.....:..:..x...:....x......:xx....x:.x:......:::.xx:....:..x.xxx:...x...x:...:...xxx.xx.xxx:x..:......---------------------x....x:.x:x.:::.::.x:..xx::x....x.xx:xx..xx.::x.:...x.x...-x....x.x....----:.x..x..::.::xx.:::....:x:...xx:.x..--......xx:x----------....::.x:xxx........:...---x.:.x:.x..:--...x.:.:::.x.:.x..:..---.x...::::--:..:x.:x..x..x:::..x..x.xxxxx........:.xx.x..:x.:...x..:..x.....:.....xx:x..xxxx.....x.....x..x........... 22M9I15M3I19M6D4M2D12M7D265M21I58M1D12M4I36M2D10M10D24M3D11M2I21M3I9M2D106M 370/624 59.3% 666/94230402 0.0% 75/624 12.0% 15650816 NA +14391 chr4 + 190214555 68972990 68972989 68973999 1010 ATCTATTTCCTCTTTTTCTTCTTTCCTATTTTACCAAATGTTCGACAGGAAATCAAACAAAGTTTTGTGACCAAAAATATAGCCGTTGCCACACAGACCAGCAAAACCACAATCACACCCAAAGAGTGGCACTGGTACTAGGAGAGGTTGTGCGCAGCTAGCCGAGGGTGCTTGGCTCCTTTGTGGTGCATGACAAACTTGATCCAGAAAACTGCTCAACCCAGGGGCTTTACAGGTCGATCATGGTGAATTTTTGATAACCTTATAGCATTCTCTTTATAATTGGAAAGCAAGAG--------------------------------------CACA--------------TATGGAAAACAGAGTTTTG---TTTTGTTTTC------ATTAAAAAGAAGTAGGTAAAC-----------------------CGTAGCATATGTTATACAAGCC--------AAAAGC---TTGTTGAATAAAAGAATTAT------------------TTTTGT-------TGTGATATGAACTT-----CATTGGTTGCATAGCATTGAACAGATACGGTGGGGAAATTGAAAAAGACACATATTCTTAGCAGAATGGGGTAAAATGAAGACGTAGAAAAATACTTAGTAAGCTGGTTGTTAATTTAAATCTACTGTTTCCAAGAAGGAGGATTGACACT--CTATGAAC----TATCAT-----------TTCCAGGACTATT---------GCAATACTAAGATGATTATACCTGATGATATAATCATTG------CAATACTAAGATAATGGCAATACTAAGATGA---------------TAATACCTGAGATTGAGAGGGAAGATCTTTTAAATAGTCTTCCAGTATGGCCCTAACATTTTCTAGTATGATATATAACA-TAATCAATGG--TAGATA-----AGCCTTTTAAAGCAGTAATACTTACAAAAGATTATTGATACCTGTTCTCAAAGACCTAAGCAAA-TCTGTACCTGTAATTGTATTCATGTTCAGCTGCACAGCTGCTCCTTTGGCTTTCATGTGAGAGGTGTTGTCAAGATGATCACCAAACATAGGAAACTCCCACCATAGGGACTCCATGGTAAATAGCTTCATAGACCCCATTTATATCACCATGAGTGATAAAAGCTTTGGTTTGTGCATGACCT chr4 + 94230402 53288525 53288524 53289672 53288525 53288524 53289672 1148 ATCTATTCTTTCTTTTTCTTTGTG---ACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGAGATTTGTCACTGATTTCTGAAACAACCCATTCCACAACTGGCTGTTGTTTTGAGGAAGGTAGAAAGCTGTGCTTTTACTTTCGTCAATATTACATAAAAATATTTGAAACCAGCCCAGTTTATTCCTATCTGCACAGAACTTGAGATACAAACTTTAATAGAGAAAGTCAATCTTTGCAAAGAAAAATTATGCCAAATGATTCCAATTACTCTGTAAAAAAAAGTGACGTAAACTTTTTTACATCTGTTCAGGTACATCGCTACAATAACCTAAGGATACTG---GAGGCTCAGA----TAAGAGAACTGTGATGGCTCCATACAGAGAA------TAGATAAAACAACTTTGCACTGTCATGCAGTGTATCCAA-----AGAATTTATGCTAGCAGTGAACACAGAATCATCCTGGGAGTTGCTCCGGAGCTATCTTTCTCAAAGGAATCTTAAAATG-CAATAC---AAGGTAGAATTGCTGGTCTCTCTTTTCTGAGAAGATGCTGATATTTAGTAAAGATTTGTTTTTTCTCTAAGACCCGAGTGCCAGCTATTCGATATTTTGAGT----TCCCAGAAGAGTC------------AGCATGTCTCACATCAGCAGCCCAAGGTTTAAATAGCATCACTCTAATGGAAGAACAAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTC-GTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATC-CCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT .......:::..........:x.x---.:::.....x..x...x....x...x..x:..:x::..x:::.xx.x:..xx:...x:.x..::......:x.:...:.x::.x.xx...:...::x.....:........:...x:..:.x...x......:.:.xx::......x...........::..........:.::........:..x....x::....:.....x.:x..::.:..:.....x..:..x......:...x.:..:.:..:..:..::..:...:x:.:..--------------------------------------....--------------.:x....:::...:xx:..---....::....------....x.x.:..:..xx.:..x-----------------------.::..x.:x..xx......:.:--------:....:---.:x...x.x.:..:......------------------:.:...-------x....::.:.....-----...:x...xx:xx:...:.xxxx:...xxx.::...x.:..---:..:.x..x.----..:x....:x.x.xx::x.xx.x..:x....------.x::...:x::::.x.xx.:.xxx..x:.x...x.....-----..:...x.::..--.x:.....----x.....-----------:...:.::....:---------.x...x:...:...-:x....---.x.:..x...:::..------.xx.x..:...x:...x::...:.x..xx:.---------------...x...:...xx:x..xx:xxx...x....:.:.----.:....x.x:.:.------------..:...x:x:.:.x..-:.::.x.x..--..:...-----.x:..xx.::.:x.::..x...:..:x.::...:..:..:x....x:...xx.xx::..x:.:.-.....::.-..x.x...::.x.x:.:.....xx..x..x........x..::.........x:::.......x.x..:...x.......:....x.-..x.....x....:.......................:......x:.x:..........:..:..:..:..x.::x:x.x...:... 24M3D269M38I4M14I19M3I10M6I21M23I22M8I6M3I20M18I6M7I14M5I41M3D10M4D31M6D39M5D12M2I8M4I6M11I13M9I14M1D6M3D15M6I31M15I35M4D13M12D16M1I10M2I6M5I64M1I8M1D87M1D87M 617/967 63.8% 1148/94230402 0.0% 224/967 23.2% 15684465 NA +6559 chr4 + 190214555 68973781 68973780 68974025 245 GATTATTGATACCTGTTCTCAAAGACCTAAGCAAATCTGTACCTGTAATTGTATTCATGTTCAGCTGCACAGCTGCTCCTTTGGCTTTCATGTGAGAGGTGTTGTCAAGATGATCACCAAACATAGGAAACTCCCACCATAGGGACTCCATGGTAAATAGCTTCATAGACCCCATTTATATCACCATGAGTGATAAAAGCTTTGGTTTGTGCATGACCTAGTTGGGAAACTGAATAAGAAGTATG chr4 + 94230402 57814223 57814222 57814458 57814223 57814222 57814458 236 GATCATTAATAACTTTTTCTAGTGCTTCATACAATTCACTCTCAGTGACAGTCTTCCAGTTCAACAATATTCCCATGCCTTTGGCCTGCACTCGGGTCATAGTATCGTAATGGTCTCCGAAAA-GGGGAATTCCCACCACTGGGACCCCATGGTACATGGTTTCAAAAATGCTGTTCAAACCACCATGACTAAGAAAAGCTTTTATGTTAGGGTGACCT-----GGAAAT---ATAAGAGGTATG ...:...:...x..x..:::.:x.x:::.x:...x..xx.x:.x..:.:x..x...xx.....:.x::.:xx.:::x........:.x..:x:.:.xx:.:x.:..:x:...:..x..:..x.-:..:..:........:x.....:........x..:.:....x.:.:x.::..:.x.:........x.:.x.........x:.x.xx.x:......-----.....:---......:..... 123M1D95M5D6M3D12M 149/236 63.1% 236/94230402 0.0% 9/236 3.8% 11159558 NA +8548 chr4 + 190214555 68985007 68985006 68985276 270 CTACTCTCTTTTTTTTCTTGT---CTTAACAAACTTTTGATAATCAAACCAGCAAAATATTATCACAAAGAGAGTAAAAATTGCCTTGCAG------------GCCAGCACAACCAGAGAGCAGTACTGGAGCCATGTGAGACTGTTGGCAGGTGGCAGCAAGTACTTGGCTCCTCTGTGGCGCATGACAAACTTGATCCAGAAGACTGTTTGGTCTGTGGGCTTCATAAGCTGATCATAATGAGTGACTGA-AACCATATAACATTCTCTTTACAGTTAACGAAA chr4 + 94230402 53288527 53288526 53288812 53288527 53288526 53288812 286 CTATTCTTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAA ...:...:.:.....::....---.:..x..x.:...:x.:.::x....xx...:x.:x.x.:x.x..x..::x:.:x...x..:x::...------------.....x...x....:x..::.......x:...x..:...:x..x:....x...:xx.....:...x......:....:...........:.::...........x.:.:x...::x:.....x..x:....:..:.::..x:.xx:x..-...:x..x....:.:..:..::..:.:.x:... 21M3I67M12I149M1I33M 175/270 64.8% 286/94230402 0.0% 16/270 5.9% 15696480 NA +3512 chr4 + 190214555 68996029 68996028 68996187 159 GCATACAAAAGTTACACAGT----AAAAGTGAAAGTGTATATGTGTGTG-TGTGTATATTTTACATATA------TATGTGTATATATATATGT----GTGTGTGTATATATATGTATATATATATGTGTGTGTGTGTGTATATATATATATATGTGTATATATATATATATAT chr4 + 94230402 21109116 21109115 21109286 21109116 21109115 21109286 171 GCATGCAA---TTACTTGGTGATGAAATGTCAAAGCATCGGTGTATGGGCTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTAT ....:...---....x::..----...x..x....::.xx:...:..x.-..x.::...:.x.x.x...------.x..:x....:..:.:...----...x.:....x........:x:.:....::x:....::x.:..::...:..:x:...:x.x.:.:.....:.:... 8M3D9M4I25M1I19M6I19M4I76M 102/156 65.4% 171/94230402 0.0% 18/156 11.5% 47886913 NA +3546 chr4 + 190214555 68996042 68996041 68996157 116 ACACAGTAAAAGTGAAAGTGTATATGTGTGTGTGTGTATATTTTACATATATATGTGTATATATATATGTGTGTGTGTATATATATGTATATATATAT-GTGTGTGTGTGTGTATAT chr4 + 94230402 67514856 67514855 67514969 67514856 67514855 67514969 114 ACAAAGTAGAAATGT--GTTTACATGCACATGTGTCCATATTTTGGGTGGGTATTTATAGATATGTATGTGGGTATGAATATATA-GTACATTTAAATAAAGTGTGTAATTTTATAT ...x....:..:..x--..x..:...::::.....x:.......:x:.:x:...x.:..x....:......x..:..x.......-...:..x..x..-:x......:xx.x..... 15M2D68M1D12M1I18M 79/113 69.9% 114/94230402 0.0% 4/113 3.5% 1481186 NA +3186 chr4 + 190214555 68996110 68996109 68996171 62 GTGTGTGTGTATATATATGTATATATATATGTGTGTGTGTGTGTATATATATATATATGTGT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:...:...x:.......x.:....:...:......:.:.::..x.:...::..x...:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -17637819 -76592583 +3190 chr4 + 190214555 68996117 68996116 68996177 61 TGTATATATATGTATATATATATGTGTGTGTGTGTGTATATATATATATATGTGTATATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.:....:...:...:.::.......:.......x:x:..:..::........... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 13301669 NA +3273 chr4 + 190214555 68996143 68996142 68996210 68 TGTGTGTGTGTATATATATATATATGTGTATATATATATATATATCTTGGTTAATTGGTCCACTCATT chr4 + 94230402 48958675 48958674 48958741 48958675 48958674 48958741 67 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAG-TGATTTTTCCAATCTTT .......x......:........:............x....:x.xx..:.-.:...xx....x..x.. 50M1D17M 53/67 79.1% 67/94230402 0.0% 1/67 1.5% 20037468 NA +3000 chr4 + 190214555 68996145 68996144 68996185 41 TGTGTGTGTATATATATATATATGTGTATATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x.:....:............:........x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 20037470 NA +3033 chr4 + 190214555 69003143 69003142 69003195 53 GGCTAAAAAAAAAAAAAAAAGAAAAAAACCCATCAAAAAGTAGCCTAAGGTAA chr4 + 94230402 92505096 92505095 92505148 92505096 92505095 92505148 53 GGCTGAAAAAAAAAAAAAAGGAAAAAAAGGCAACAATATGTGGCTGAAGGCAA ....:..............:........xx..x...x.x..:..:x....:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -23501953 -70728449 +11995 chr4 + 190214555 69004849 69004848 69005155 307 GATTTAACTAATCCCTTTTTCCTTTCTTTCCTTTT------CTAGCGAACTTCCAGAAACAAAACAGACAACACTTTGTGATGATAAATAGCACAGTTGCCACACAGGCCAGCAGGAACCCAATCACATCCAAAGAGTGGTACTGGAACCAGGTGAGGTCATGGGCTGCAACTCGAAGGTGTTTGGCTCCTTTGTGGCGCATGACAAATTCAATCCAGAAGACTGCTCGATCCAAGGGCTTCACTGGTTGATCATGATGAATTCTTGATGATTTCATAATATTCTCTTTATATCTGAAGGATAAAAATAAAGA chr4 + 94230402 53288511 53288510 53288823 53288511 53288510 53288823 313 GATGGGATCAATGTATCTATTCTTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGA ...xx:.::...x:x.:.x.:........:::...------...x.:x.:..:.x:x.:.......x:..:.....x:::.x:..:..xxxx:..:.x..::.....::x.:..:...:x.x.xx.......::x...........x.......:..:.x:..:..x..x:x..xx.:...:..x...........:..........................x....x:....::.....x.:...:..:..:..:..x..::.x...:.:..:.x..:.:.:..:..:..x.....::.x:...:x..:.. 35M6I272M 204/307 66.4% 313/94230402 0.0% 6/307 2.0% 15716338 NA +10718 chr4 + 190214555 69008851 69008850 69009078 228 ACTCACGAAGGATCATTAATTACTGTCTTCAGTGCATTCAGCAGGT-CTGTACTCGACATTGTGTTGAAGTCCACTCTAACAGCTGTTCCCTTGGCCTTCATGTGAGCAATGTTATCAGATTGATCAAAAAACAATGGAATGCCCACCATAGGGATCCCATGGTAGATTGTCTCGTAGATGCCATTGGCTCCACCATGAGTTATAAAAGCTCTGGTTTTTGGATGACCT chr4 + 94230402 53289445 53289444 53289672 53289445 53289444 53289672 228 ACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTG-TCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT .......x..:..::.....x.....x....x.....:x.x:..:.-....:-...x..x....:....:....x:::...x..x.:...:..x...:............:...:...x::..:...:x.....xx.....x..x.....x.....:........:..x.::..:.....x.......::...........x..:..:..::.x.::xxx.....:... 46M1I5M1D176M 166/227 73.1% 228/94230402 0.0% 2/227 0.9% 15719406 NA +7020 chr4 + 190214555 69014018 69014017 69014184 167 CTTACCTTTTGTGGGATCTTGGCAAGGGCTGTTGCAATTACATTGGCCCTTTCTGCTGTCATGTTACTGACCATTGACCCCAGAGAAAACACCACAGCACCATATTCTCCAGAGCTCTGTACAAACTCCTCCATTTGCT--GTGGAAAAAAAAATGTT-----TCATCACAAAA chr4 + 94230402 53290865 53290864 53291038 53290865 53290864 53291038 174 CTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAAGGCATACTAACGGTAATCACAAAA ..:..x........:.x..x.x::......x.x.....:.....:x::.....xx:x..:.x...::x............x........:......:::....:...:..x..:.....x.....:..:..x....x..--.x..x.:..::x..::.-----.x......... 139M2I17M5I11M 120/167 71.9% 174/94230402 0.0% 7/167 4.2% 15723153 NA +9009 chr4 + 190214555 69018226 69018225 69018390 165 AAAGTATGTTTACCTTAGGTAGGGGTTTGGCAGGTTTGCAGTGGAGTCCTCCAACAAAATCAACGTTTGGTAAGAATGGATGAGGAAATTTAAAATTCCAGGAGTTTCGCATAAGCCATATGTCAGCTTTTCCCATTGTCTCAGATAAGGTAGTGGGTCTTCCTG chr4 + 94230402 53292253 53292252 53292417 53292253 53292252 53292417 165 AAAGTCAGAATACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTG .....xx.xx......x..:..x..:..x.....:.x......:..............x....x...x..:.:...x..::.........:.....:....x.xx...xx..x........x..x...........:......x.:.:x..x.....:....... 165M 128/165 77.6% 165/94230402 0.0% 0/165 0.0% 15725973 NA +9407 chr4 + 190214555 69019659 69019658 69020299 641 CTTACCTAAAACTTCACTGTAAAAGTGATCCCACTTCTTCATATCAAATATTTGGTACCAA-AAGTCAAAATAAAGCACATAGAGCACATTTTTTACCCTCTCCATGAAAGTCATTTGATCACTTAATTTTGACATAACAACAGGTACGTAGGAAGGAGGGAAAATAAATCCTCCACTGTGCCTTTCAAATGAGTAGCCAGGAGTGAAGCTGTGACTGTACACAAAGGGTATGTTAAATAGCGCAGCCAGCAGCTCACCACAGGGTAAATAAGCATCTGCAAAAACGATGTCAAATCTTGACTCTTGTAGTTTTTTCATAAGTTTCTTATTTGAAACTACATCTTTACAGAAGTTTCTAATTATGTT--------ATTATATG-------------CCCACATGATTTCTT-------------------GTTCTTG--TGAAAAATATAACCAAAATGTATCTTTTGGAATGTTGCATCGTGATATTCTC-----CAACTCAGTTTTAG----TTAAAGATGTAGGATAAACTTCGAGTTTAAGAGTGGATGAGTCATTGGGATCAAAAAGAATGGAAGCTGAAGATGCCAGTACAGTCACCTCATGACCTCTCTGAACAAGTTCTTTCAGGATTGTCTTCATATTCATCCAAGGGCTGTACTCTGCGGCCCACACCAGCACCTTTCCACAA chr4 + 94230402 53294698 53294697 53295364 53294698 53294697 53295364 667 CTTACCCAAGACATTACTGTAGTATCCATCCCA-TTCATCTCGCCAAAACTTTAAGAAAAATAAATCCATGGAAAGGTAAAAGAAGAAATTCCACAGTCTCTCCACAAAGGACATCTGGTCTGTCAACCCTGTTGTGCTAGCAGGCACGTAAGAAGGTGGAGATGGGAGCCCACCACACAGCCGCTCTACCACATTTCCCTCAGAAAAACGGAAGCTGTAGACAAAAGGAATTTCCAGGAGTTGTGCTGCAAGCTCACCACATACAGCTAAAGGGTCAGCGATCAGAACATCAAACTTGGCCTGATGCAGCTTTGCTATCAGCTGATGATTTGACACCAAGGCATCACAGGAGTGCTTTGACAAGTTGGAAAAGGAGTATATGGCTTCTTTCATCCTCCACATGACCTCCCAGGGGAACAGATTAGGGAGGTCATTAATCCAGAGATCTAA--GAAGTCCACCATCAGA------GCATCGAAGGTCTCTTGGGTGAAGTTCACTTTCAGGACCTCAAAGGTGAAAG-----------------GAGATGATGTGTCTTGGTAGTCAATGAGCATATTTATTGATGGTACCAGCACAGTCACTTCGTGACCCCGGAGAATGAGTTCTTCCAGCAGCACTTTCATGTTGATCCAGTGACTGGCATCGGTGGGCCAGACCACCACCTTCCCACAA ......:..:..x.:......:x.x:x......-...x..x:::....xx...::x.xx..-..:..x.x:x....xxx.x...:x.x...::x:.x:.......::..:.x...:..:..xx.:..:::..x::.:x:.:....:.....:.....x..::.x:x:.::..x....xxx...x:..x.x::x:.xx..xxx..x:..:.x.x::.....x.....:..x..x.:x.:x..:xxx..::xx...........x:xx:xxx...x:..x..:.xx.x:.::.....::.x.x..xx..:..:...x::..x..:.xx.x......x..:.x:x.x.:....:...x::.x:x:.x...--------.x......-------------:........::..::-------------------..:x..:--:x.:.:..x...--:..:.x:.:.x.:x.:------......x::xx:...:-----x.::...x...:..----.:....:..x.:.-----------------...xx....x...x.x.x::....x:..x..:xxx::...x.:.:....:........:..:.....:.xxx...::.......:...x.x::::.....:..x.....:x.:...xxx..x.:..x...x....x......:...... 33M1D27M1I305M8I8M13I15M19I7M2I12M2D16M6D16M5I14M4I13M17D149M 367/615 59.7% 667/94230402 0.0% 78/615 12.7% 15724961 NA +3821 chr4 + 190214555 69041528 69041527 69041601 74 ATAAATATAATAAATAAATAAAACTTAAAAAAATTAAAAATTAAGAAAAAAAAAGTCAAGAAGTTAATCATAAT chr4 + 94230402 54057085 54057084 54057158 54057085 54057084 54057158 74 ATAAATATAAGAAATGAATAAAACTCCAAGGAAATGTAAAATAAGGAAAATAAAATAAAGAAGTTACTCTAAAT ..........x....:.........:x..::..x.:x...x....:....x...:.x.........x..xx... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 14984443 NA +3185 chr4 + 190214555 69052534 69052533 69052595 62 AAAAGTTTGCTTAAAAAAAAAGAAATGGTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 + 94230402 66171666 66171665 66171727 66171666 66171665 66171727 62 AAAAATTATGGTAAAAAAAAAGACATTATTTGCTTAAAAAAAAAAAAAAAAAAGAGAGAGAA ....:..xxxx............x..x:..xx...x.................:.:.:.... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 2880868 NA +3218 chr4 + 190214555 69063179 69063178 69063248 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.... 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -6970018 -87260384 +3022 chr4 + 190214555 69064001 69064000 69064058 58 AAAGGGGAAGATGAGATGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 90382673 90382672 90382730 90382673 90382672 90382730 58 AAAGATGAAGGTGAGATGATAAAAAAAGAAAGATGTTGAGATAAAAAAAAAGAAAGGA ....:x....:.......:x...:.........x:xx:...x.:...:........:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -21318672 -72911730 +3106 chr4 + 190214555 69064023 69064022 69064104 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:.x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 27951845 NA +3010 chr4 + 190214555 69064049 69064048 69064113 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 40049376 NA +3455 chr4 + 190214555 69064063 69064062 69064147 85 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAG----AAAGAAAGAAAGAAAGAAAGAAAAACAAAAT chr4 + 94230402 75241507 75241506 75241595 75241507 75241506 75241595 89 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAGT ...x..:..:x.:...xx.x...x.........:..:..........:...x..----.:......x..:.x.x..:.:.x..::..:. 54M4I31M 61/85 71.8% 89/94230402 0.0% 4/85 4.7% -6177444 -88052958 +3611 chr4 + 190214555 69094052 69094051 69094156 105 TGTTGCAGATTTGGTTCTAG----------AATACTAAAATAAAGCAAATATTGCAATGAAGCAAATCACACAATTTGTTTTGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 3383826 3383825 3383937 3383826 3383825 3383937 112 TATTGGAGAGTTGATTCCAGTGCAAACTTAAAGACTACAA-AATGGAAAAAT--AAGTGTTGCAAATGATATACTTTGCTTAGGTTCCTTTTTTTTTTTTTTTTTTTCCTTCTCT .:...x...x...:...:..----------..x....x..-..x.x...x..--x.:..xx......x.:.:.x....:..x....:....................::..:.:. 20M10I10M1D11M2D61M 77/102 75.5% 112/94230402 0.0% 13/102 12.7% 65710226 NA +3073 chr4 + 190214555 69123199 69123198 69123254 56 TAAGAGGTAGACTGAGCATGTAAAACAAACAAACAAACAAAAAAACAGAAAAGAGT chr4 + 94230402 80233301 80233300 80233356 80233301 80233300 80233356 56 TAAGACGTGGACTGAATAAATTAAAAAAACAAACAAACAAAAAACCAGGAGTGAAT .....x..:......::.x:.x...x..................x...:.:x..:. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -11110102 -83120300 +3069 chr4 + 190214555 69130695 69130694 69130759 65 ATCTTTT-TAGAATTTTTTTTCTTCCTTTCCTTTTCTTTTTTCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 84739513 84739512 84739578 84739513 84739512 84739578 66 ATCTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTT .......-.x:......:.....::.::.x...x:.x::.:..........x.x............ 7M1I58M 49/65 75.4% 66/94230402 0.0% 1/65 1.5% -15608818 -78621584 +3148 chr4 + 190214555 69130696 69130695 69130764 69 TCTTTTTAGAATTTTTTTTCTTCCTTTCCTTTTCTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTGAC chr4 + 94230402 72471349 72471348 72471417 72471349 72471348 72471417 69 TTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGC .::.:...x.:x....:....xxx....:.x..:x.:..:...:.....:....:........:...:. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -3340653 -90889749 +3034 chr4 + 190214555 69130713 69130712 69130785 73 TTCTTCCTTTCCTTTTCTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTGACGCGGAGTCTCTCTCTGTCACC chr4 + 94230402 56907959 56907958 56908031 56907959 56907958 56908031 73 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTCACC .:.x:........::..:x.:......:.:.:..............:..xx:.xx:..xx::.:...x..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 12222754 NA +3050 chr4 + 190214555 69130718 69130717 69130763 46 CCTTTCCTTTTCTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 44980311 44980310 44980356 44980311 44980310 44980356 46 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAA ....:.:.......:..:.x.:.:..........:.........:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 24150407 NA +3778 chr4 + 190214555 69155533 69155532 69155641 109 TATATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTGTGAATATATATATGTGTGAATATATATATATGTGAGTATATATATATATATATATACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....:..:.....x.x....x.:....x.....:..:x:.:.....:x:...x.:x....::.:...:xx:..::x.x.:...:x:.:.:...:x....::..::.... 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 48046339 NA +3840 chr4 + 190214555 69155535 69155534 69155641 107 TATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTGTGAATATATATATGTGTGAATATATATATATGTGAGTATATATATATATATATATACAC chr4 + 94230402 21109194 21109193 21109300 21109194 21109193 21109300 107 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCAC ....:........x.x....x.::...x.....:..:x:.:....::x:.x:..:x....:..:..x.:x:..::x.x....x:...:.:...:x....::..:... 107M 68/107 63.6% 107/94230402 0.0% 0/107 0.0% 48046341 NA +3009 chr4 + 190214555 69167104 69167103 69167180 77 TAAGCAATTGTCCTCTAAATTATAAAAAAAATAAAAAGTAGAATCACAACCAAAATTACAAAAATATTATATTTTAT chr4 + 94230402 85491464 85491463 85491540 85491464 85491463 85491540 77 TAAACATTCATTTTCTTAATTAACACAGAGATTACAATAAGAATTCCAGCCAAACTTATAAAACTATTCTATTTTGT ...:..x.::.::...x.....xx.x.:.:..x.x..xx.....:x..:.....x...:....x....x......:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -16324360 -77906042 +3049 chr4 + 190214555 69167649 69167648 69167715 67 TATTACTTTTTTTTATTTTCTGTAAGTAGTTTTTCAAATATTCTTTGCATCTTTTCTTTCCTTCTTC chr4 + 94230402 79479912 79479911 79479978 79479912 79479911 79479978 67 TATTACTTTTTTTTTTTTTCTCCAATTACTTTAATAGTTTTTCCTATCATCTTTTTTTTTTTTTTTC ..............x......x:..x..x...xx:.:x.x...:.xx........:...::..:... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -10312263 -83918139 +3050 chr4 + 190214555 69172417 69172416 69172485 69 TTTTTTTTTTTTTTTTTTTTAGTTTTCCACTACTTTGATGGAAACTGTATGTAGATT-------TGATATACACAG chr4 + 94230402 91238573 91238572 91238648 91238573 91238572 91238648 76 TTTTTTTTTTTTTTTTTTATGGTTTTCAATTATGTTAACTGAAAATAGATATAGATCCTCTAAATAATATTTACAG ..................x.:......x.:..:x..:.:x....x.:x..:.....:-------.:....x:.... 57M7I12M 52/69 75.4% 76/94230402 0.0% 7/69 10.1% -22066156 -72164246 +3054 chr4 + 190214555 69191245 69191244 69191328 84 TTCAAATGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCACAAGAGAAAAATAACCCCCAAAAATTAGGCTAAGGTA chr4 + 94230402 22790703 22790702 22790786 22790703 22790702 22790786 84 TCCAGATGCAGGCAGCAAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAGCCTGAAATAGATAAGAAAATGTA .:..:...xx::x.:x.......x......x...x........:......:....x..x.:..:xx..x.:x..:.xx..x... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 46400542 NA +11788 chr4 + 190214555 69200439 69200438 69200739 301 ACTAATCTCTTTTTCCCTTCTTCCCTTTT------CTAGCAAACTTCCAGAAACAAAACAGACAAAACTTTGTGATGATAAATATCACAGTTGCCACACAGGCCAGCAGAAACCCAATCACATCCAAAGAGTGGTACTGGAACCAGGTGAGGTCATGGGCTGCAACTCGAAGGTGTTTGGCTCCTTTGTGGGGCATGACAAATTCAATCCAGAAGACTGCTCGATCCAGGGGCTTTACTGGTTGATCATGTTGAATTCTTGATAATTTCATAATATTCTCTTTATATCTGAAGGATAAAAATAAGGA chr4 + 94230402 53288517 53288516 53288823 53288517 53288516 53288823 307 ATCAATGTATCTATTCTTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAAAGGA .::...x.x.:.x.:.:.....::::...------...x..x.:..:.x:x.:.......x:..:x....x:::.x:..:..xx:x:..:.x..::.....::x.:..::..:x.x.xx.......::x...........x.......:..:.x:..:..x..x:x..xx.:...:..x...........:x.........................x....x:.....:.....x.:...:..:..:..x..x..::.x.....:..:.x..:.:.:..:..:..x.....::.x:...:x..... 29M6I272M 201/301 66.8% 307/94230402 0.0% 6/301 2.0% 15911922 NA +11196 chr4 + 190214555 69204424 69204423 69204651 228 ACTCACAAAGGATCATTAATTACTGTCTTCAGTGCATTCAGCAGGT-CTGTACTCGACATTGTGTTGAAGTCCAATCTAACAGCTGCTCCCTTGGCCTTCATGTGAGCAATGTTATCAGGTTGATCAAAAAACAATGGAATGCCCACCATAGGGATCCCATGGTAGATTGCCTCATAGATGCCATTGGCTCCACCATGAGTTATAAAAGCTCTGGTTTTTGGATGACCT chr4 + 94230402 53289445 53289444 53289672 53289445 53289444 53289672 228 ACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTG-TCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT ......:x..:..::.....x.....x....x.....:x.x:..:.-....:-...x..x....:....:....::::...x..x.....:..x...:............:...:...x.:..:...:x.....xx.....x..x.....x.....:........:..x..:........x.......::...........x..:..:..::.x.::xxx.....:... 46M1I5M1D176M 169/227 74.4% 228/94230402 0.0% 2/227 0.9% 15914979 NA +6785 chr4 + 190214555 69208346 69208345 69208495 150 CTTACCTTTTGTGGGATCTTGGCAAGGGCTGTTGCAATTACATTGGCCCTTTCTGCTGTCATGTTACTTATCACTGACCCCAGAGAAAACACCACAACACCATTTTCTCCAGAGCTCTGTACAAACTCCTCCATTTCCTGTGAAAAAAAA chr4 + 94230402 53290865 53290864 53291014 53290865 53290864 53291014 150 CTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAA ..:..x........:.x..x.x::......x.x.....:.....:x::.....xx:x..:.x...::xx.:..:......x........:.......::....x...:..x..:.....x.....:..:..x.......:x..::x.:.. 150M 105/150 70.0% 150/94230402 0.0% 0/150 0.0% 15917481 NA +8673 chr4 + 190214555 69212560 69212559 69212724 165 AAAGTATGTTTACCTTAGGTAGGGGTTTGGCAGGTTTGCAGTGGAATCCTCCAACAAAATCAACGTTTGGTAAGAATGGATGAGGAAATTGAAAACTCCAGGAGTTTCGCATAAGCCATATGTCAGCTTTTCCCATTGTCTCAAATAAGGTAGTGGGTCTTCCTG chr4 + 94230402 53292253 53292252 53292417 53292253 53292252 53292417 165 AAAGTCAGAATACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTG .....xx.xx......x..:..x..:..x.....:.x......:.:............x....x...x..:.:...x..::.........x....::....x.xx...xx..x........x..x...........:......x.:.:x..x.....:....... 165M 126/165 76.4% 165/94230402 0.0% 0/165 0.0% 15920307 NA +10047 chr4 + 190214555 69213997 69213996 69214657 661 CTTACCTAAAACTTCACTGTAAAACTGATCCCACTTCTTCATATC----AGACATTTGGAACCAAAAGTCAAAATAAAGCACATAGATCATATTTTTTACCCTCTCCATGAAAGTCATTTGATCACTTAATTTTGACATAACAATAGGTATGTAGGAAGGAGGGAAAATCAGTCCTCCACTGTGCCTTTCAATTGTGTAGCCAGGAGTAAAGCGGAGACTGTACACAAACCGTATGTTAAGTAGCGCAGCCAGCAGCTCACCACAGGGAAAAACAGCATCTGCAAAAACGATGTCAAATCTTGACTCTTGTAGTTTTTTCATAACTTTCTTATTTGAAACTACATCTTTACAGAAGTTTCTAAATATGTCATATAATTCCCACAGGATTTCTTG----------------TTCTTGTGAAAAATATAACCAAAAGCTATCTTTTCGAATGTCTGACCATCTCTTAACCTGTTGCATGATGATATTCTC-------AAATTCAGTTTTAG----TTAAAGATGTAGGATAAACTTCAAATTTAAGAGTGGATGCATCATTGGGATCAAAAAGAATGGAAGCTGAAGATGCCAGTACAGTCACCTCATGACCTCTCTGAACAAGCTCTTTCAGGATTGTCTTCATATTCATCCAATGGCTGTATTCTGCGGCCCACACCAGCACTTTTCCACAA chr4 + 94230402 53294698 53294697 53295364 53294698 53294697 53295364 667 CTTACCCAAGACATTACTGTAGTATCCATCCCA----TTCATCTCGCCAAAACTTTAAGAAAAATAAATCCATGGAAAGGTAAAAGAAGAAATTCCACAGTCTCTCCACAAAGGACATCTGGTCTGTCAACCCTGTTGTGCTAGCAGGCACGTAAGAAGGTGGAGATGGGAGCCCACCACACAGCCGCTCTACCACATTTCCCTCAGAAAAACGGAAGCTGTAGACAAAAGGAATTTCCAGGAGTTGTGCTGCAAGCTCACCACATACAGCTAAAGGGTCAGCGATCAGAACATCAAACTTGGCCTGATGCAGCTTTGCTATCAGCTGATGATTTGACACCAAGGCATCACAGGAGTGCTTTGACAAGTTGGAAAAGGAGTATATGGCTTCTTTCATCCTCCACATGACCTCCCAGGGGAACAGATTA-GGGAGGTCATTAATCCAGAGATCTAAGAAGTCCACCATCAG-AGCAT--CGAAGGTCTCTTGGGTGAAGTTCACTTTCAGGACCTCAAAGGTGAAAG-----------------GAGATGATGTGTCTTGGTAGTCAATGAGCATATTTATTGATGGTACCAGCACAGTCACTTCGTGACCCCGGAGAATGAGTTCTTCCAGCAGCACTTTCATGTTGATCCAGTGACTGGCATCGGTGGGCCAGACCACCACCTTCCCACAA ......:..:..x.:......:x.::x......----.....x..----.:..x..x:...xx.x..:..x.x:x....xxx.x...xx.x...::x:.x:.......::..:.x...:..:..xx.:..:::..x::.:x:.::...:.:...:.....x..::.x:xx..:..x....xxx...x:..x.:::::.xx..xxx..x...:....::.....x.....xx.x..x.:x..x..:xxx..::xx...........x:x.:xx.x..x:..x..:.xx.x:.::.....::.x.x..xx..:..:...x::..x.x:.xx.x......x..:.x:x.x.:....:...x::.x:.:.x..::x.x..xxxx:.:.x.::.....x----------------.:.:x.x.:..x.x..x.-x::.:.::..:xx.:.::.x:...:.xx.x::.x:x.:.x.-x....--:..x:x....-------..:....x...:..----.:....:..x.:.-----------------...xx....::..x.x.x::....x:..x..:xxx::...x.:.:....:........:..:.....:.xxx...::..:....:...x.x::::.....:..x.....:..:...xxx..x.:..x...x....x...:..:...... 33M4D8M4I345M16I18M1D41M1D5M2D10M7I14M4I13M17D149M 373/636 58.6% 667/94230402 0.0% 56/636 8.8% 15919299 NA +3008 chr4 + 190214555 69230475 69230474 69230536 62 GAGAAAGAAAGAGAGAAAGAAAGAAAGAGAGAAAGGAAGAAAGAGAAGTTATTATAGTGCAA chr4 + 94230402 38078777 38078776 38078838 38078777 38078776 38078838 62 GAGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAA ...x......:..:............:..:.:..:...x:x.::.:.:..:.:.:..x.x.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 31151698 NA +3109 chr4 + 190214555 69256124 69256123 69256220 97 TTTTTGAATACATATATTTACCCACACACAGACACACAGACACACACACAGCCCAAAAAACAACAAGTTTTGAAGAGAATGTATATAAATAGAAACT chr4 + 94230402 66743629 66743628 66743716 66743629 66743628 66743716 88 TTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTC----AGTCTTCAGGTTTTTATAA-----TACATTAACAAAAGCT ...x.:....x...:..:...x.x...x...:......x............:.----.:x.xx..:.....x.x:.-----..:..x..:.:..:.. 53M4D19M5D16M 64/88 72.7% 88/94230402 0.0% 9/88 10.2% 2512495 NA +3174 chr4 + 190214555 69261559 69261558 69261650 92 TCTCTTCCT--TTCCTTCTTTCTTTCTCTTTCTTTCTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895609 32895608 32895702 32895609 32895608 32895702 94 TTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .:.......--..::.:..x..x......x.x...::....xx....x..xx:x.:..:.:x::.:.:...x:.x......x.....:...... 9M2I83M 62/92 67.4% 94/94230402 0.0% 2/92 2.2% 36365950 NA +3296 chr4 + 190214555 69261561 69261560 69261637 77 TCTTCCTTTCCTTCTTTCTTTCTCTTTCTTTCTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 31719021 31719020 31719097 31719021 31719020 31719097 77 TCTGTCTTTCCTTCTGCCTTCCTCTTCATTTTTTGCTGACTGCTGCCCTCTGTCTTCCTTTTTTTTCTTTATCTTTT ...x:..........x:...:.....:x...:.....xx:.x:.x.::...x....:....:...::..:x.::... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 37542540 NA +3384 chr4 + 190214555 69261574 69261573 69261683 110 CTTTCTTTCTCTTTCTTTC-----TTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:....:::..:.-----..x......:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.:.::..........:..:.:. 19M5I58M4I33M 71/110 64.5% 119/94230402 0.0% 9/110 8.2% 5564457 NA +3165 chr4 + 190214555 69261577 69261576 69261678 102 TCTTTCTCTTTCTTTCTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCT-CTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x....:.-.......x..x...:..:..x..x....:.x.x.:..::x:.xx....x..----.:..:.:x::.:.:...x:.x......x.....:...... 10M1D51M4I40M 69/101 68.3% 105/94230402 0.0% 5/101 5.0% 36365979 NA +3132 chr4 + 190214555 69261591 69261590 69261683 93 TCTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCT chr4 + 94230402 18131234 18131233 18131326 18131234 18131233 18131326 93 TCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCT ........x..:....x.....:::...:.x.:.:..:xxx:..:::.......::.:x..::..::.:xx.::..x::::....:.:..... 93M 55/93 59.1% 93/94230402 0.0% 0/93 0.0% 51130357 NA +3434 chr4 + 190214555 69261592 69261591 69261680 89 CTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTC chr4 + 94230402 57372022 57372021 57372110 57372022 57372021 57372110 89 CTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..x...:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x...... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 11889570 NA +3147 chr4 + 190214555 69261594 69261593 69261684 91 TGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTC chr4 + 94230402 57372020 57372019 57372110 57372020 57372019 57372110 91 TGCTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ....xx:.:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.:.... 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 11889574 NA +3097 chr4 + 190214555 69261605 69261604 69261697 93 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTGTCTCTCTGTTA chr4 + 94230402 57372027 57372026 57372119 57372027 57372026 57372119 93 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTA .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x.:.x..x:x:..... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 11889578 NA +3269 chr4 + 190214555 69261609 69261608 69261692 84 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTGTCTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x:.xx....:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 11889582 NA +3172 chr4 + 190214555 69320293 69320292 69320357 65 GTCACAGCGAGACTTTGTCTCAAAAAAGAGAAAACAAATAACGAAAAACAAAAACCAACAAAAAA chr4 + 94230402 22392433 22392432 22392497 22392433 22392432 22392497 65 GTCACAGACTGGCTTCTATTTAAAAAAAACAAAACAAACAAACAAAAAAAAAAACCACCAAAAAA .......xxx.:...:xx:.:......:.x........:..xx.....x........x....... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 46927860 NA +3324 chr4 + 190214555 69322358 69322357 69322406 49 AGGTTTTTTTGTTGTTGTTGTTGTTGTTTTATTTTTTTTTGTCCCTGTT chr4 + 94230402 49686176 49686175 49686224 49686176 49686175 49686224 49 AGGCTTTTTCACAGTTGTTGTTGTTGTTTTAGTTTTTTTCTTCCCTGTT ...:.....:::x..................x.......:x........ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 19636182 NA +3033 chr4 + 190214555 69322362 69322361 69322407 46 TTTTTTGTTGTTGTTGTTGTTGTTTTATTTTTTTTTGTCCCTGTTG chr4 + 94230402 65988178 65988177 65988223 65988178 65988177 65988223 46 TTCTTTGTTTTTGTTGTTGTTGTTTAGTTTTTTTTGGTCCTTACTG ..:......x...............x:........x....:.::.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 3334184 NA +3142 chr4 + 190214555 69322365 69322364 69322412 48 TTTGTTGTTGTTGTTGTTGTTTTATTTTTTTTTGTCCCTGTTGAAAGA chr4 + 94230402 63908324 63908323 63908371 63908324 63908323 63908371 48 TTTGTTGTTGTTGTTGTTTTTTTTTTTTTTTATAACTGTGTTGAAAGA ..................x....x.......x.:x.:x.......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 5414041 NA +3102 chr4 + 190214555 69353379 69353378 69353445 67 TGTTTTGTTGTTGTTTTGTTTTGTTTTGTCCTCTCTCCTACTTCTTTCATTATTCTTTTTGTTCTTT chr4 + 94230402 1663289 1663288 1663355 1663289 1663288 1663355 67 TGTGTTAGAGTTGGTTTGTTTTGTTTTGTGTTTCCTCCCCTTTTTTGTTTTATTCCTTCTTTTCTTT ...x..:xx....x...............x:.::....:x:..:..x:x......:..:.x...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 67690090 NA +3209 chr4 + 190214555 69363040 69363039 69363112 73 TGCACCTGTAGTTCCAGCTACTCAGGAGACTGACATGAGAGAATCGCTTGAACTCGGAAGGTGAGGGTTTCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x................::::..:....xx:xx.x...x.:.......:.:....x.xx...:.x:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -6670165 -87560237 +3249 chr4 + 190214555 69367976 69367975 69368040 65 GAATGGCTTTTTTTTTTTTTTTTTTTTTCTGCTGAATCTGTGTTTCTTCG----ACTCTGGAAAGTCTG chr4 + 94230402 41690925 41690924 41690993 41690925 41690924 41690993 69 GATTAGTCTTTTTTTTTTTTTTCTTTTCCTTCTAAACCTGTTTTTCTTCTAAGCACCTTAGAAATTCTG ..x.:.::..............:....:..x..:..:....x.......x----..::.:....x.... 50M4I15M 50/65 76.9% 69/94230402 0.0% 4/65 6.2% 27677051 NA +3149 chr4 + 190214555 69418215 69418214 69418269 55 GAACTTCTTTATATTTATTTTCCAGTCCTAGGGGAAAAGAATATACTATAATTGT chr4 + 94230402 29409140 29409139 29409194 29409140 29409139 29409194 55 GAATTTCTTTACACTTATTTTCTAGTGTTAGAGAAAAAGAAAATAGAAAAATTGT ...:.......:.:........:...x:...:.:.......x...xx.x...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 40009075 NA +3758 chr4 + 190214555 69433084 69433083 69433191 108 AACTATGCAAACATATTAGGAGAAGTTGAC-TGCAGTGGCATGCACCTATAGTTCCAGCTACTCAGGAGGCTGAGGAAGGTGGATTACTTGAGCCCAGGAGTTCAAGGC chr4 + 94230402 76033169 76033168 76033272 76033169 76033168 76033272 104 AAGTATGTAA---TGTCATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ..x....:..---.:.:.x..:.:.x...:-::......--.....x.:..............::::........xxxx...:.x:......:.....:..:.:x:... 10M3D17M1I8M2D68M 73/103 70.9% 104/94230402 0.0% 6/103 5.8% -6600085 -87630317 +3089 chr4 + 190214555 69458041 69458040 69458092 52 CTTTCTTTCTCTGAATAGTCCCCTGAACAACACACTGAATAGGTCTATTTCA chr4 + 94230402 16139247 16139246 16139298 16139247 16139246 16139298 52 CTTTCCTTCTCTGAAGACTCCTCTGAAAAACTCACTCAATAACTTTATTTCA .....:.........x.x...:.....x...x....x....:x.:....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 53318794 NA +7019 chr4 + 190214555 69463259 69463258 69463458 200 ACGGCAGAGTAAACATAAATATATTGGTCTTAGACAGGGGATTAGCAGGTTTGTAATAGGGCCCTTCAACAAAATCAAAATTTGGTAAGTTTCGGTGAGGAAGTACTAAATACCGTTGGGTTCAAATGAACCATATTTCTGCTTTCCCCTTTGTCTCAGATAATGTAGTGGGTCTCCCAGAATGAGTAAAATAAAAAACA chr4 + 94230402 53292243 53292242 53292435 53292243 53292242 53292435 193 ATGGCAGAACAAA-GTCAGAATAC----CTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTG--TGGGCAAAGTACAAGGCA .:......::...-:.x.:x...:----...x.:...x..x..x.....:.x.:.:.:::.:...:.......x.....:..x..:.:.xxxx..:......:.x.x....x..:x.:x....x:..x.:......:........:...x.:......x.:.:...x.....:..:..x.--..:.:...:..x..::.. 13M1D10M4D152M2D18M 132/193 68.4% 193/94230402 0.0% 7/193 3.6% 16171016 NA +3152 chr4 + 190214555 69468482 69468481 69468525 44 TTTGGGGGTTGTTTGGGTTTTTTTTGTTTGTTTTTTGTTTGTTT chr4 + 94230402 80358761 80358760 80358804 80358761 80358760 80358804 44 TTTGTGGGATGGTTTGGTTTTCTTTGTTTGTTTTTTGTTTGTTT ....x...x..x..x......:...................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -10890279 -83340123 +3066 chr4 + 190214555 69470400 69470399 69470484 85 TTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTTAATCAAGCATATGCCCATGAGTTTTTCTGCAGTAGTGGAAAATACGTTCAAA chr4 + 94230402 28518183 28518182 28518267 28518183 28518182 28518267 85 TTGTGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTCCTGGATATTTAAATGCATTTTACTACAGATGAGCAAAATAAGCTCAGA ..x..xx..x....................x..xx..xx.x....x:xx...x:....x..:...xx.x.x......x.:...:. 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% 40952217 NA +3616 chr4 + 190214555 69472168 69472167 69472252 85 ATGAATGGTGGTGCGTGGCTGTAGTCCCAGCTACTTGGGAAGCTGAGGTGGGAGGATTCCTTGAGCCCAGGAGGTCTAGGCTGCA chr4 + 94230402 76033194 76033193 76033276 76033194 76033193 76033276 83 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..:x.::.......::.--......:...........::.:......x:xx.x.:.x:x.....:.....:..x.:.:.....:. 17M2D66M 58/83 69.9% 83/94230402 0.0% 2/83 2.4% -6561026 -87669376 +3153 chr4 + 190214555 69473389 69473388 69473438 50 TTCTATTAAGTGTGCCATTAGCTTTTTTTTTTTTTTTTTTTTGCAGATAC chr4 + 94230402 78218066 78218065 78218115 78218066 78218065 78218115 50 TTCTGTTTAGTGTGCCACCAGTCTCTTTTTTTTTTTTTTTTTTCTGATGC ....:..x.........::..::.:.................x.x...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -8744677 -85485725 +3055 chr4 + 190214555 69479338 69479337 69479388 51 AGATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857606 6857605 6857656 6857606 6857605 6857656 51 AGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ...x.......::..:...:..:.:x:.........x...........x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 62621732 NA +3021 chr4 + 190214555 69479347 69479346 69479429 83 TATATATATATGTGTGTGTGTGTGTGTGTGTGT--GTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA--TGCACACATACACACAT ...x:..x.:...x.................:.--:...:x.::.x::...::.x......:.x..--.::.:.:...:...... 33M2I31M2D17M 57/81 70.4% 83/94230402 0.0% 4/81 4.9% -16355186 -77875216 +3259 chr4 + 190214555 69479349 69479348 69479423 75 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ...............::...x......::xxx.x.:::.::.xx:.................xx..x..:.::.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 29542174 NA +3613 chr4 + 190214555 69479349 69479348 69479430 82 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x.................:.xx:...:xx::..:.:.::..x...:..:x....::.:.:.......:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -16355184 -77875218 +3690 chr4 + 190214555 69479351 69479350 69479437 87 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACATACATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATA----CATGTTTATGCACACATACACACAT ...x:..x.....x.................:.xx:...xx.:.....:..::.x...----:..:.x...::.........:.:.. 58M4D25M 61/83 73.5% 83/94230402 0.0% 4/83 4.8% -16355182 -77875220 +3141 chr4 + 190214555 69479358 69479357 69479428 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx...:.:.x::..:..:::.:..:.:::..x:....x.:.:.x.... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -9786161 -84444241 +4200 chr4 + 190214555 69479365 69479364 69479438 74 TGTGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACATACATATATA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.................:..x:.:..x:.........:...x..:..:.x...:....:.:.:.:.:. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% -16355176 -77875226 +3031 chr4 + 190214555 69479367 69479366 69479438 72 TGTGTGTGTGTGTGTGTGTGTGTTTGTATACACATACATATATAATTATATATATATACACATACATATATA chr4 + 94230402 85834541 85834540 85834612 85834541 85834540 85834612 72 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .....x.................x.xx..::.x::.:.:....:xxx...:..:.x..::..:.....:.:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -16355174 -77875228 +11008 chr4 + 190214555 69480640 69480639 69480930 291 TCTTTTCCCCTTCTTTCCTGTTCTAACAAACTTCCAGACACAAAACA---GACATTTTGTGATGATGAATATCACAGTTGCCACACAGGCCAGCAGGAACCCAGTCACATCCAAAGAGTGGTACTGGAACCAGGTGAGGTCGTGGGCTGCAACCCGAAGGTGCTTGGCTCCTTTATGGCGCATGACAAATTCAATCCAGAAGACTGCTCGATCAAGGGGCTTCACTGGTTGATCATGATGAATTCTTGATAATTTCATAGCATTCTCTTTATATCTAAACGATAAGCAGAAAAG chr4 + 94230402 53288530 53288529 53288821 53288530 53288529 53288821 292 TTCTTTCTTTTTCTTTGTGACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAA--AAAAGAAAGAAAG .::....:::......x:x:::...x..x.:..:.x:xx:.......---::..:..x:::.x:.....xx:x:..:.x..::.....::x.:..:...:x.x:xx.......::x...........x.......:..:.x...:..x..x:x:.xx.:......x........:..:..........................x....x:..x..:.....x.:...:..:..:..:..x..::.x.....:..:.x.:..:.:..:..:..x..:..--.x...x.::.... 47M3I229M2D13M 192/289 66.4% 292/94230402 0.0% 5/289 1.7% 16192110 NA +3570 chr4 + 190214555 69481139 69481138 69481198 60 TGTGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x......:............:........x.xx.x...x.:..........::.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -6552066 -87678336 +10929 chr4 + 190214555 69485187 69485186 69485429 243 TAAAAAAAAAGTTATACTCACAAAGGATCATTAATTACTGTCTTCAGTGCATTGAGTA-AGTCTGTACTCGACATTGTGTGGAAGTCCAAACTAACAGCTGCTCCCTTGGCCTTCATGTGTGCAATGTTATCAGGTTGATCTGCAAACAATGGAACGCCCACCATAGGGATTCCATGGTAGATTGCCTCATAGATGCCATTGGCTCCACCATGAGTTATAAAAGCTCTGGTTTTTGGGTGACCT chr4 + 94230402 53289430 53289429 53289672 53289430 53289429 53289672 243 TAATGGAAGAACAAAACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTG-TCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCT ...x::..:.::x.x......:x..:..::.....x.....x....x.....::.x..-.x.....:-...x..x....:x...:....:x::...x..x.....:..x...:.......x....:...:...x.:..:..x.......xx....:x..x.....x..............:..x..:........x.......::...........x..:..:..::.x.::xxx..:..:... 58M1I8M1D176M 175/242 72.3% 243/94230402 0.0% 2/242 0.8% 16195757 NA +3064 chr4 + 190214555 69485743 69485742 69485804 62 TTCTTGTTTTTTTGTTTTTTGTTTTTTGCTTTTAATGGAGACGGAGTCTCCCTCTGTTGCCC chr4 + 94230402 74754348 74754347 74754409 74754348 74754347 74754409 62 TTCTCATGTTTTTGTTTTGTGTTTTTTTTTTTTAATGGAGGTGTTATTTCCTTCCCTTCCTC ....::.x..........x........x:...........::.xx:.:...:..:x..x.:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -5268605 -88961797 +4270 chr4 + 190214555 69486604 69486603 69486698 95 CTTACCAAGAAGATCATTCTGGGGTATCCACTTGTACAGCCGAGTATTGAGTCCTAAAGTATCTGGTTTATTCCCATCAAATCTCCACAGAACCT chr4 + 94230402 53290397 53290396 53290491 53290397 53290396 53290491 95 CTCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCT ..:......x..:.....:...........x.::..x.x..x:..:...::x..x.:..:x........x..x..x.::x...x...x..:.... 95M 67/95 70.5% 95/94230402 0.0% 0/95 0.0% 16196207 NA +7046 chr4 + 190214555 69489434 69489433 69489672 239 CTTACCTTTTGTGGGATCTTGGCAAGGGCTGATGCAATTACATTGGCCCTTTCTTCTGACGTGTTACTGACCATCGACCCCAGAGAAAACACCACAACACCATTTTCTCCAGAGCTCTGGACAAACTCTTCCATTTCCTGTGAAAAAAAAGAATTTGTTCTATCATAATAGATTATCAGCACAGCAAGCACTGTGAAAGAATTGTTATAAAAAGAGAGAAAATCAAGT------TTTATCAGGAA chr4 + 94230402 53290865 53290864 53291094 53290865 53290864 53291094 230 CTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCTAGGAGGCAGAAGG-----------CATACTA-ACGGTAATCACAAAATGCA-TGTTACACAG--ATTATGTGAAGAGAGAGTATAAATTATTTAGTTTATTAAGAA ..:..x........:.x..x.x::......xxx.....:.....:x::.....x::x.x::x...::x......:.....x........:.......::....x...:..x..:.....:.....:.....x.......:x..::x.:...:-----------....x..-.:x:.x.x....:x.x...-...x.x.x.:--:....:x:........:x..x..x.------.....:.:... 152M11D7M1D19M1D10M2D25M6I11M 155/224 69.2% 230/94230402 0.0% 21/224 9.4% 16198569 NA +9269 chr4 + 190214555 69493668 69493667 69493861 194 GACAAAACAAACAGTAATAGTTTACCTTCGGTAGGGGTTTGGCAGGTTTGCAGTGGAGTCCTCCAACGAACTCAACATTTGGTAAGAGTGGGTGAGGAAATTGAAAATCCCAGTAGTTTCGAATAAGCCATATGTCAGCTTTTGCCATTGTCTCAGATAACGTAGTGGGTCTTCCTGATGGGGGAAAAAAAAAG chr4 + 94230402 53292245 53292244 53292433 53292245 53292244 53292433 189 GGCAGAACAAA----GTCAGAATACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTG-TGGGCAAAGTACAAGG .:..:......----:x:..xx......:..:..x..:..x.....:.x......:...........:.......x:..x..:.:..:x...:.........x............xx...x:..x........x..x......x....:......x.:.::..x.....:.......-....x:..:x.x..:. 11M4D162M1D16M 143/189 75.7% 189/94230402 0.0% 5/189 2.6% 16201423 NA +5168 chr4 + 190214555 69495140 69495139 69495427 288 CCTAGAACTTCACTGTAGAACTGATCCCA-CTTCTTCATGTCAAATATTTGGAACCAAAATTCAAAATAAAGCACAT-AGATCATATTTTTTACCCTCTCTATGAAAGTCATTTGGTCACTTAGTTCTGACATAACAACAGGCACATAGGAAGGAGGGAACAGAAGTCCTCCACTATGCTTTTCAATTGCGTAGCCAGGAGAGAAGCGGAGGCTGTAGACAAAGGGTATTTTAAGTAACTCGGCCAGCAGCTCACCAAAGGGGAAAACAGCATCTGCAAGAACAACATCA chr4 + 94230402 17221866 17221865 17222153 17221866 17221865 17222153 288 CCTAAAGCATCTCTGTAGTATCAATCTCAGTTTCCAGAGGGAAGATAATGGTATGTCATATTCTA--CAGAGCATAGGAGAACATGTTTTTTAGCCTCTCTGTGAAGACTGTCTTGTCTGCTAGGGAGTTTAGAATGGCTGGCACATAGGAAGAAGGTGCTGGGAGGCCCCCACAGAGCCACTCCACTGTGTTTTCCGTGGATAACCAGATGGTGTACACAGAAGGGATACACAGCTTCTCCACAGACAGCTCCCTGCTGGGCAGCAGTGAGTCTGCCACATGGACATCA ....:.:.x..x......x.:::...:..-:...:xx.x.xx.:...x.x.x.xx:x.x....x.--:.:....:.x-...x...:.......x.......:....:::::.:.x...xx:...xxxxxx:.x..:::.x.............:...x:x::.:..x..:....x:x..:x:..x.:..:..xx:.x.x:..x..x.:..x.x....x...:.:..x..x:xx..:xx...x:.x::......x.::xx...x.:x.xx.x:.....x.x.xx:...... 29M1I35M2D10M1I212M 168/286 58.7% 288/94230402 0.0% 4/286 1.4% 52273274 NA +7288 chr4 + 190214555 69495221 69495220 69495808 588 ATATTTTTTACCCTCTCTATGAAAGTCATTTGGTCACTTAGTTCTGACATAACAACAGGCACATAGGAAGGAGGGAACAGAAGTCCTCCACTATGCTTTTCAATTGCGTAGCCAGGAGAGAAGCGGAGGCTGTAGACAAAGGGTATTTTAAGTAACTCGGCCAGCAGCTCACCAAAGGGGAAAACAGCATCTGCAAGAACAACATCAAATCTTGACTCCTGTAGTTTCTTCATAAGTTTCTTATTTGAAACTATATCCTTACAGAACTTTCTAAGTATGTCAT-TAAATGTCCACATGATTTCTT---GTACTTGTGAAAAATATGACCAAAATGTGTCTTTTGGAAGTTCT--GCCCATCTCTTAACCAGCTGCTTGATAATATCCTCAAACTCAG--------------TTTTAGTTAAAGATACAGGATAAACTTCAAATTTAAGAGTAGATGGGCTGTTGGGATCGAAAGAAATGGAAGCTGAAGATGCCAATACAGTCACCTCATGACCTCTCTGGACAAGTTCATCCAGGATTGTCTTTATATTCATCCAGTGGCTGAATTCTGTGGGCCACACCAGCACCTTTCCACA----------ACTCCCAGAGCTA chr4 + 94230402 53300307 53300306 53300910 53300307 53300306 53300910 604 ATATTTTTAATTCTCTCGCCAAAGGACATGTGGTCAGTGAGCTCAGACAGGGCCGCAGGTGTGTAGGATGGTGGGGCTGGGATCTTGCCACAGTGCCTCTCAACAGTCGAGGCTGGAGAGAAGCGCAGGGAGTACACAAAAGGCAGTGCCAGCTTGAGAGCTACGAGGTCCCCGCATGGAGTCACTGGGTCTGACAGCAGCAGGTCGTAGCCAGAGCCCTGCAGATGGGCCATCAGCTCCTGGTTGGTCAGCACTGCATCGCACATCTGCCTGTTGACCTGGTGCCAGCTTTTGGACAGTTTCCCCAGCTCCTTGTAAA----ACTGCCAGAAGG-------TCGAAGCTGTTGGCCTGTTGTTCAGCCA-TAACGTCATGATGTCTTCAA--TCAGGTTTGCAATGGTGTCTTTCTTGAAGGGCACGTTATAGACCTCAAACTTCTCGGTGGTCTCAGCCTTTGGCTGAATGAAGAGGGAAGCATTGGACACCAGGATGGTAACGCTGTGCCCACGGCGGATGAGCTCCTGAATAACCATCTTCACGTTTAGCCAGTGGCTGCCCTCCGTTGGCCAGACCAGCACATTCCCACAGAAGACAGGTGCTACCAGAGCCA ........x.::.....xx::..:.x...x......x.x..:..x....x::.x:....::::.....x..x...:x::.:.x:::x....x:...:.:....:x.:xx..x.x...........x...xx...x.....:..:.x.x:x..:xxxxx:..:.xx..x..x..:x.x..::xx..x.x:....xx..x.xx.x:..:x.x.:x..x:....:..x.xxx:...x..:.:..x:..x.xx.x:.:xx.x.::..x.x..x:..:xxx.:x.x:.-:x.::x.:::x.:::....::---x.x.....:..----.:x:...:..x.-------.x....:.x.--...::.:x:.:.:...-:x:.x.x..:..:..:....--....--------------:...xx.x..:.::..:xx...:..:.....:..xxx:..:.x:xx:x:x..x..x.x:.x::.:.x......xxx:..::...:x.::..x..x:::..x..x.xx:...::..:..x.xx.x:.:::....:.::..:.x..........xx:..:..x.....x........x..:.....----------:..x.......:. 283M1I21M3I11M4D12M7D10M2I16M1D20M2D4M14I184M10I13M 326/574 56.8% 604/94230402 0.0% 44/574 7.7% 16194914 NA +3408 chr4 + 190214555 69500458 69500457 69500538 81 AGGAAAGGAAGAAGAAAGGAAGAAAAGAAAGAAAGCAAGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGAAA chr4 + 94230402 2498577 2498576 2498657 2498577 2498576 2498657 81 AGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ..:x....:..:.....x.:.::.:.xxxxx....x:......:...::........:.x..::x.........x:..... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 67001881 NA +3610 chr4 + 190214555 69500531 69500530 69500665 135 AGAAGAAAGAAAGAAAGACAAGAAAGAAAGCAAGAAA--AGAAAGCAAGAAAGCAAGAAAGCAAGCAAGAAAGCAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 16412915 16412914 16413054 16412915 16412914 16413054 140 AAAAGAAGGAGAAGCCGACAGTGATGAATGTAGCAATTTGGAAAGCGAGAAAGAAAGCAAGCATGAGGAGAAGTTCTGGAGGAGGAGAGCAAGGAGGACTAATAGAAGGAGAGACTTTGGAGGGAGGAGAAGAAAGGAAG .:.....:..:.::xx....:x:.x...x.:.:x..x--:......:......x...x.....x.x::::...:xxx.:..:.:..:..x...:.:..xx:.x....:..:...x---:..::..::::.......:... 37M2I76M3I22M 83/135 61.5% 140/94230402 0.0% 5/135 3.7% 53087616 NA +3023 chr4 + 190214555 69502041 69502040 69502143 103 TGCCTTGTCTCTCTTTCCCTTCCTTCCTTCTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 40546846 40546845 40546948 40546846 40546845 40546948 103 TACCCTTCCAATCTCTTGCTTCCTTGCTTCTTATTGATTTCTCTTTCTGTTTTCTCCTTCCTTTGGATTTTGATTCCCTCCAGTTCTTGTTTTTCTTTTTGTT .:..:.x:.xx...:.:x.......x......x.:xx.:.:.......x.:.::.:...:....xxx.:..xx..:.:.:.xx.::..x...:.:.:...x.. 103M 63/103 61.2% 103/94230402 0.0% 0/103 0.0% 28955195 NA +3197 chr4 + 190214555 69512681 69512680 69512746 66 AACCATTTTTTTCTCTGCAACTTCACCAG-----CATCTGTTTTTTTTTTGTTTGTTTGTTTGTTTTGTTT chr4 + 94230402 55600280 55600279 55600350 55600280 55600279 55600350 71 AGTCATCCTTCTCTTTGCCTTTCCCTCATTGGATCGACTGCTTTTTTTTTGTTTGTTTGTTTGTTTTGTTT .::...::..:...:...xx:.:.x:..x-----.:x...:.............................. 29M5I37M 50/66 75.8% 71/94230402 0.0% 5/66 7.6% 13912401 NA +3203 chr4 + 190214555 69512687 69512686 69512758 72 TTTTTTCTCTGCAACTTCACCAGCATCTGTTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTGA chr4 + 94230402 78321265 78321264 78321336 78321265 78321264 78321336 72 TTTTCTCTCTTCATTGAAAACAGTATGTTTCACTGTTTTGTTTGTTTGTTTATTTTGCCTTATTTTATTTAA ....:.....x..x:xxx.x...:..x.x.:x:.x................:.....::..:....:...:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -8808578 -85421824 +3015 chr4 + 190214555 69512715 69512714 69512779 65 GTTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTGACTTTTGTATAATAGCCATTTG chr4 + 94230402 27280223 27280222 27280287 27280223 27280222 27280287 65 GTTTCTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTTACCCATCTATAGGATAGGAAGCTTCTG ....:...x..x..........................:::::x..x.x.x...:x.:x.x.:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 42232492 NA +3071 chr4 + 190214555 69512716 69512715 69512754 39 TTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGT chr4 + 94230402 23572658 23572657 23572696 23572658 23572657 23572696 39 TTCTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTGT ..:.x...........................x...... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 45940058 NA +3025 chr4 + 190214555 69512718 69512717 69512752 35 TTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 12568759 12568758 12568793 12568759 12568758 12568793 35 TTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTT ..............................x.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 56943959 NA +3001 chr4 + 190214555 69526096 69526095 69526162 67 CAGACTGCGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTCCAATAGAG chr4 + 94230402 83042899 83042898 83042965 83042899 83042898 83042965 67 CAGGTAGTGTTAGAAAAAAGAAGGAAAAAAAAGAAAAAAACCAACAAGACCCAATACTCCAATAGAG ...::x.:...xx......:..::........:.......xx..x..:.xxx..x:........... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -13516803 -80713599 +3289 chr4 + 190214555 69526106 69526105 69526185 80 TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTCCAATAGAGATAGTCCATAGTGAAGAGTGTTT chr4 + 94230402 58075157 58075156 58075236 58075157 58075156 58075236 80 TTCACAGAGTAACCAAAATGAAAAAAAAAAAAAATACAAAAAAAAACCCCAAAACAGATGTTCTATATTGTGGAAGATTT ....x.:.:x..xx....x:..............x.x.......::.:....x.x....:x..:...x..x:..:x:... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 11450949 NA +3009 chr4 + 190214555 69545534 69545533 69545587 54 TCTCTCTCTCTCTCTCTCTCTCTGCCTCTGTATGTGTGTGTGTTTGTGCATGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.x::.:.x.xx..:...:...:...:.:.... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 42967268 NA +7530 chr4 + 190214555 69549336 69549335 69549653 318 TGTTGTGAGTCCCACAAAGGGGTCAAGAAAATATCCTGCATCAATAGGTTAGACTTTATACA---------CAATGGTA--------CTTATCTGGAGGTTTATTAATGACTGCTCTTAAGATATTTTGAAAATTCACTCTTGTCATTATGTTTACATTCATATCCACAGCTGCCCCTTTGACTTTTATGTGAATGATGTCATTAGGCTGATGAGCAAATATGGGAACTCACACCATACAGA-CCTATGATAAGTAGCTTTATATATCCCATTATTTACACCACAAATGATAAATGCTTTCTTTTTGAGATGACCTACTTTGTGGAACGGATGAGA chr4 + 94230402 53289363 53289362 53289690 53289363 53289362 53289690 328 TATTTTGAGTTCC-CAGAAGAGTCAG---CATGTCTCACATCAGCAGCCCAAGGTTTAAATAGCATCACTCTAATGGAAGAACAAAACTCACGTAGAA--TTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCTGCAACAAGGAA--GGTGAGA .:..x.....:..-..:.:.:....:---x..:..:::.....::..x::.::x....x.:.---------:.....x.--------..:.:x.:..:--..:..........:x:.:.xx::..:xxxx.:....xx.x.:....x.:..:.x.x..:..xx..x..x..x..:.....x:.::.:......:::.:..::.:.x....:.x......:.......::.xx.....xx:..-:.:...:...:......:...x........:x.:x.....::.:.:..:..x..:..:x::xx.:....:...:.xx::x....--.:..... 13M1D12M3D33M9I8M8I11M2D142M1I84M2D7M 195/310 62.9% 328/94230402 0.0% 26/310 8.4% 16259973 NA +3081 chr4 + 190214555 69553265 69553264 69553319 55 CTGAATAAAATTGAGATACAAAAAAACAAACAAATGAACAACAAAAAATCAATGA chr4 + 94230402 28741147 28741146 28741201 28741147 28741146 28741201 55 CTGACTAAAAATCTGATTTAAAAAAACAAACAAATGCAAAACAACAACTCAATGA ....x.....x.xx...x:.................x.x.....x..x....... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 40812118 NA +3200 chr4 + 190214555 69567067 69567066 69567154 88 TCAACTTTTTCCCACTTCCTCTGCTCCAGAAATATACACTTCCAGAAGAAAAAATGACATTGAAAAACATACACAGCCTAGCAGAAAA chr4 + 94230402 59296580 59296579 59296667 59296580 59296579 59296667 88 TCAATTTTCTCCAGCTTCCACTGCTCCAAAAATGCACAGGTTTAAAAAAAAAAAAACCTTAACTGACCATACTAGTTCTTGCAGAAAA ....:...:...x:.....x........:....::...xx.::.:..:......x:x.x.x:xx:.x.....xx:x:..x........ 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 10270487 NA +3023 chr4 + 190214555 69572963 69572962 69573027 65 ATATATATACATGTATATATATATACATGTACATATATATACATGTATACATATATATCATTTGA chr4 + 94230402 76709593 76709592 76709657 76709593 76709592 76709657 65 ATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGTTGA ........:.....:.x....:.x:...x:....:...:.::..x.:.::x........xx.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -7136630 -87093772 +3322 chr4 + 190214555 69578551 69578550 69578677 127 CTCTCCCTCTTCTTTTCT------------TCTGTTCTGTTCTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTCCTTCTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCCTTCTTCTTCTGCTTCTTCATCTTCTT chr4 + 94230402 65167896 65167895 65168034 65167896 65167895 65168034 139 CCCTCTCTCCTCTTATCCCAGAACTATCAATCTCTTCTTATCTCTTCTGCTTCTTCTTCTCTGGTTCTTTTTATTGCTGGTTCCCTTGCAGATATTTCTGCCTCTGTTCCTGCTCTTTCTTCCACCTGCACATTTTTTT .:...:...:....x..:------------...x....xx........x.....:......:xx:..:..:.x:.x..xx.:.:::.x.xxx.x:.:..x.::..x:....x..::......::.:.x:x...:..:.. 18M12I109M 79/127 62.2% 139/94230402 0.0% 12/127 9.4% 4410655 NA +3171 chr4 + 190214555 69584811 69584810 69584884 74 TGAAACCAAAAGTCAAAACACACACACACACACACACACACACACACACACACACACACACGCAGTTCTCCATT chr4 + 94230402 4929420 4929419 4929490 4929420 4929419 4929490 71 TGAAACCAC---TCAAAACACCCATATGCACACACACGCACAAACACACCATCACACAGTCTCAGCAATCCACT ........x---.........x..:.::.........:....x......xxx......xx.x...:xx....:. 9M3D62M 54/71 76.1% 71/94230402 0.0% 3/71 4.2% 64655391 NA +3344 chr4 + 190214555 69586499 69586498 69586578 80 GTGCACATGCAGTCCCAGCTACTTGGGAAGCTGAGGTGGGAGGATGGCATGAGTCCAGGAGGTTGAGGCTGCAAAGGGTG chr4 + 94230402 76033204 76033203 76033283 76033204 76033203 76033283 80 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATG ......:..:...:...........::.:......x:xx.x.:.xx:.x...::....:..x..x:.....:.:.:x:.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -6446705 -87783697 +12521 chr4 + 190214555 69589370 69589369 69589667 298 ACCTATTCTCTTTTTTTCTTCTTTCCTATCTTACCAAATTTTTGACAGGAAAACAAACAACATTGTATGACCAAAAATATAGCCGTTGTCACACAGACCAGCAAGAACCCAATTACATCCAAAGAGTGGTACTGGAACCAGGTGAGGTCATGGGCTGCAACCCGAAGGTGCTTGGCTCCTTTGTGGCGCATGACAAACTCGATCCAGAAGACTGCTCGATCCAGGGGCTTTACAGGTTGATCATGGTGAATTCTTGATAACCTCATAGCATTCTCTTTATAACTAGAAGACAAATAAA chr4 + 94230402 53288525 53288524 53288819 53288525 53288524 53288819 295 ATCTATTCTTTCTTTTTCTTTGTG---ACCCTACCACATTTTCTACAGCAAAACATGCAGCACTTGACAAGAATGAAGCCAGCAATGGCTGCACAGATGAACAAGAATGCCAGAACATCCAGGCAGTGGTACTGGTACCAGGTAAGATGGTGAGCAGCTGGTCTCAAGTGCTTTGCTCCTTTGTGACGCATGACAAATTCAATCCAGAAGACAGCTCTGTCCAGAGGCTTAATTGGCTGGTCGTGGTGTATCTTGGATAACTTTAAAACACTTTCCTTGTAGCTGAAAAAAGAAAGAA .:.......:.:........:x.x---.:.:.....x.....:x....x......x:..:..:.xx.::.xx.x:..xx:...x:.x.:::......:x.:......:x.x.xx.......::x...........x.......:..:.x:..:..x..x:x:.xx.:......x...........:...........:..:...........x....x:.....:.....x.:x..:..:..:.....x..::.x......:.:.x.:..:.:..:..:..:..::..:.x:..x:.. 24M3D271M 203/295 68.8% 295/94230402 0.0% 3/295 1.0% 16300845 NA +12302 chr4 + 190214555 69594471 69594470 69594722 252 ACTTACGAAGGTTCATTAATGACTGTTCTCAAAGCGCTAAGCAAATCCACACTTGTCATTGTGTTTAGGTTCACTTCCACAGCTGCTCCTTTGGCCTTCATGTGAGCAATGTTATCAGGCTGATCAGCAAACATGGGAACTCCCACCATAGGGACTCCGTGGTAAATAGCTTCGTAGATCCCATTAGTTCCACCATGAGTGATAAAAGCTTTGGTTTTGGGATGTCCTAATTTGAGGATGGAGTGAGAAGTG chr4 + 94230402 53289445 53289444 53289696 53289445 53289444 53289696 252 ACTCACGTAGAATTGTTAATGACTGTATTCACTGCATCAACTAGATTCTGTGTCGTCAGTGTGCTGAAATCCAGCTCAACTGCAGCTCCTTTTGCCCTCATGTGAGCAACGTTGTCATGCTGGTCAGCAAACATGGGAATCCCAACCATTGGGATTCCATGGTAAATAGCTTCATAGATCCCATTGGTCCCACCATGAGTAATGAAGGCCTTTGCCAAGGGATGGCCTGCAACAAGGAAGGTGAGACACATG ...:...x..:x.::...........x:...xx..:::..x:.:..:.xxxx.:....x....:.x.::.:..x:..x..x..x........x...:............:...:...x....:................::..x.....x....:...:..............:...........:..:...........:..:..:..:..x.::xx......x...:xxx::....x..x.x..x.x:.. 252M 182/252 72.2% 252/94230402 0.0% 0/252 0.0% 16305026 NA +4834 chr4 + 190214555 69595153 69595152 69595293 141 CAGTCTTACCAAGAAGATCATTCTGGGGTATCCAATCAAAGAGCTGAGTATTGTTTCCTAATGTGGCTGGTTTCTTTCCTTTGTATCTCCATAAAACCTGTGGAAAATGGTGCTTTAATTT---TGCAAGGAAAAACACAATGA chr4 + 94230402 53290393 53290392 53290535 53290393 53290392 53290535 143 CATTCTCACCAAGCAGGTCATTTTGGGGTATCCAGTCATAAATCCTGGTGTTGGAGCCAAGAGCTTCTGGTTTTTTACCTTTGTATCGCCAGAGGACCT-TGAACAAAGGaacactaagataaacactaagataaacactaTGA ..x...:......x..:.....:...........:...x.:.x.:x:..:...xxx..x.:x.:xx.......:..x..........x...x.::....-..:.x..x..x:.x:...xx.---::.x.:..x......x.... 99M1D21M3I20M 97/140 69.3% 143/94230402 0.0% 4/140 2.9% 16304760 NA +7309 chr4 + 190214555 69596241 69596240 69596383 143 TGTACTGACCTTCTGTGGAATCTGGGCAAGGGCTGAGGCAATAAGATTGGCCTTTTCTTCTGTAAGGTTTTTGACCATTGATCCCAGAGAAAACACCACAACACCATTTTTACCTGAGCTCTGGATAAATTCTTCCATTTCCT chr4 + 94230402 53290861 53290860 53291003 53290861 53290860 53291003 143 TGAACTCACATTTTGTGGAAGCTGGCTGAGGGCTCTGGCAATCACATTACTTCTTTCACTGGTTAGGTTGTAGACCATTGACCCGAGAGAAAATACCACAATGCCATGTTCCCCTGAACTCTGAACAAATTCTTCGATTTCCT ..x...x..x..:.......x....x::......xx......x.x...:x:::....x::x..x.....x.x.........:..x........:.......::....x..:x.....:.....:.:.........x....... 143M 107/143 74.8% 143/94230402 0.0% 0/143 0.0% 16305380 NA +10059 chr4 + 190214555 69599243 69599242 69599408 166 TACCTTAGGTAAAGGTTTGGCAGGTTTGCAGTGCAATCCTCCAACAAACTCAAAATTAGGTAAGTATGGACGAGGAAATTCAAAATCCCAATATGTTCGGATTAACCAAATTTCAGCTTTCCCCATAGTCTCACATAACGTAGTGGGTCTTCCTGGAGAAAATGTA chr4 + 94230402 53292263 53292262 53292428 53292263 53292262 53292428 166 TACCTTTGGCAGTGGCTTTGCAGGCTGGCAGTGAAGTCCTCCAACAAACTCAAAGTTGGGCAGGAAAGGGCGAGGAAATTCAAAATCCCAGTATGTTCTGATTAGCCATATCTCTGCTTTTCCCATCGTCTCACACAGTGTTGTGGGCCTTCCTGTGGGCAAAGTA ......x..:.:x..:..x.....:.x......x.:..................:..:..:.:.x.x..:....................:.......x.....:...x..:..x.....:.....x........:.::..x.....:.......x:.:x..x... 166M 131/166 78.9% 166/94230402 0.0% 0/166 0.0% 16306980 NA +3318 chr4 + 190214555 69599564 69599563 69599687 124 GGAAGAAAGGAAGGAGGAAGGAAGAAAAGAAGGAAGGAAGGGAGGAAGGGAGGAAGGCAGGCAAGCAGGGAGGGAGAGAGAGGA---------AAGCAAGGAAAAGTGAGAAAAAGGGAAGAAAGAGGTAGAA chr4 + 94230402 39603864 39603863 39603996 39603864 39603863 39603996 133 GGGAGCAGCGGCAGTAGCAGTGAGGGAAGAAGTGGGACAGCTAGGAAAGGAGATGGGTATGTCTGCAGGGTGGGTGAGAGAGGATGAGGTTTGGAACAGAGAAAAAAGAGAGAAAAGCTGGGATGAGTTATAA ..:..x.:x.:x:.x:.x..x:..::......x::.:x..xx.....:....:x:..:.x.:xx......x...x.........---------:.:..::.....:x....:...:.xx:.:.x...x..x.. 84M9I40M 77/124 62.1% 133/94230402 0.0% 9/124 7.3% 29995700 NA +3207 chr4 + 190214555 69617047 69617046 69617110 64 ATTGCCAGGAAATTCTCAACTTCTCTGATCTTGATTTCTTCATCTGTAAAATAAAGTTAGAATT chr4 + 94230402 35017922 35017921 35017985 35017922 35017921 35017985 64 ACTGCTGCAAAAATCACAGCTCACCTGGCCTCTATTTCTTCATCTGTAAAATGAAGCTACAATT .:...::x:...x..x..:..:x:...::..:x...................:...:..x.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 34599125 NA +3447 chr4 + 190214555 69627523 69627522 69627684 162 AGAAAGAAAGAAAGAGAGAGAGAGAAAGAGAGAGA-------GAGAGAGAGAAAGAAAGAGAGAAAGAAAAAAAGAAGAAAGAAA----------AGAAAGAAAGAAAGAGAAGAAAGAAAAAAGAAAATCTCCTAAGGCCAATTCAA--ACTGTTCAGAAAAGGACTGAAGAACAAATAT chr4 + 94230402 54011593 54011592 54011766 54011593 54011592 54011766 174 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAA-------AAACTTAATTCCGTTATTCTTTACAAAAGAATAGCAAAAGAAGCAT .....:...:.x.:...:..x:.....:.::..:.-------..:.x.x.:x..::...:.x....:x:xx....xxx...:...----------:..:.:....x......x...:.......:...-------..:x::.....x:--.:.x..:.x.....:.:x.x.:..x..::.. 35M7I43M10I33M7D13M2I31M 101/155 65.2% 174/94230402 0.0% 26/155 16.8% 15615930 NA +3253 chr4 + 190214555 69627545 69627544 69627634 90 AGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAAAGAAAAAAAGAAGAAAGAAAAGAAAGAAAGAAAGAGAAGAAAGAAAAAAGAAAA chr4 + 94230402 51148379 51148378 51148468 51148379 51148378 51148468 90 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAA .......:::..xx.x.......:...:...:.....x.:..:xxx.::.xx....x.:..x.x:..::.x..:::..:.....:..... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 18479166 NA +3105 chr4 + 190214555 69634246 69634245 69634316 71 AAAATCAAACAAAACAAAACAA---------AACAAAACAACAACAACAACAAAAACCCACAACACTGATCACAGGAAAG chr4 + 94230402 12866356 12866355 12866435 12866356 12866355 12866435 80 AAAAATAATAAAAACAAAACAATCAAAAACCAACCAAGCAACAACAACAACAAAAACCCTAAATGCTCTTCAGTGCAAAG ....x:..xx............---------...x..:.....................xx..::..xx...xx.x.... 22M9I49M 56/71 78.9% 80/94230402 0.0% 9/71 12.7% 56767890 NA +3255 chr4 + 190214555 69635826 69635825 69635864 39 ACCAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 + 94230402 75300453 75300452 75300491 75300453 75300452 75300491 39 ACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .....................:.:.............:. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -5664627 -88565775 +3439 chr4 + 190214555 69635833 69635832 69635869 37 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT chr4 + 94230402 75300456 75300455 75300492 75300456 75300455 75300492 37 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT ..................................... 37M 37/37 100.0% 37/94230402 0.0% 0/37 0.0% -5664623 -88565779 +3203 chr4 + 190214555 69635834 69635833 69635879 46 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATAAGGTTCAGT chr4 + 94230402 13073582 13073581 13073627 13073582 13073581 13073627 46 AAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGAGTCAGT ...............xx..............:...x...:x..... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 56562252 NA +11936 chr4 + 190214555 69638894 69638893 69639565 672 CTTACCTAAAATTTTGCTATAGTATGAATTCCATTCTCCCCAGTAGGACT----GAAATATATAGTCTTGCAGAGAATAAGATATGGTATTTTTAATCCTTTCACCAAAGGTCATCTGGTCAGTGAGCTCTGATAAGGCTGCCGGTACATAGGAGACTGGTGCTGGGATTTTCCCACAGTGTCTCTCCACTGTTGATGCTGGAGAGAACCTCAATGTGTACATAAATGGAATTCCTAATTTCAGAGCAACAAGATCACCACAGATTGTTACTGGGTCTGCTACCAACACATCAAAACCACCTTTCTGAAGTCTTGCCATCAACTTTGGGTTCTTTAGTACACCATCACAG-AGTTGTATGTTAATTTGAAAGAA-AGTGTCTAGAAGTTTTCCTAGTTCTTTGTA-GAAAGCCCATATTGTGAGAGGAGTTGGTCTATGGTCAATCCACAGCATTATCATATGCTCAATTAAGGAATCTATATTGCTCTTCTTGTAGGAAA--------CAGGTATCACTTCAAAATTCACAGGAGA--ATCGGGATTGG-AGTTGATGAATAGAGTTGCTGATGAAGCCAGTACAGTCACATTGTGATTTCTTTGAATCAACTCTTCTAGAATAATCTTAATATTTAACCAATGGCTACCATCTGTAGGCCAAATTAACACATTCCCACTTAGAACAAC chr4 + 94230402 53294698 53294697 53295372 53294698 53294697 53295372 675 CTTACCCAAGACATTACTGTAGTATCCATCCCATTCATCTCGCCAAAACTTTAAGAAAAATAAATCCATGGAAAGG-TAAAAGAAGAAATTCCACAGTCTCTCCACAAAGGACATCTGGTCTGTCAACCCTGTTGTGCTAGCAGGCACGTAAGAAGGTGGAGATGGGAGCCCACCACACAGCCGCTCTACCACATTTCCCTCAGAAAAACGGAAGCTGTAGACAAAAGGAATTTCCAGGAGTTGTGCTGCAAGCTCACCACATACAGCTAAAGGGTCAGCGATCAGAACATCAAACTTGGCCTGATGCAGCTTTGCTATCAGCTGATGATTTGACACCAAGGCATCACAGGAGTGCTTTGACAAGTTGGAAAAGGAGTATATGG---CTTCTTTCATCCTCCACATGACCTCCCAG---GGGAACAGATTAGGGAGGTCATTAATCCAGAGATCTAAGAAGTCCACCATCAGAGCATCGAAGGT----CTCTTGGGTGAAGTTCACTTTCAGG----ACCTCAAAGGTGAAAGGAGATGATGTGTCTTGGTAGTCAATGAGCATATTTATTGATGGTACCAGCACAGTCACTTCGTGACCCCGGAGAATGAGTTCTTCCAGCAGCACTTTCATGTTGATCCAGTGACTGGCATCGGTGGGCCAGACCACCACCTTCCCACAAAAGCCAAC ......:..:.:x..:..:......xx..:......x:.:.:x:.::...----....x...x.x:.x..x.:..:-...:.x.x.:x...::xx.x:..:..xx......x.........x..x.:.:...x.:x.x:x..x..:..:..:..::x...x.x.....x:::x.....xx.:.x...:..:::xxx.x.:xx...:..x.xx..xx....x.:...x......:.:.:xxx:x.x..x:....x........x.:x.:..xx.....x..x.:..:x........x:::x.:.xx..x..::....:....:..xxx.:..:xx:.x:.x:x........-...xx.x..x:..x...:..:.:-...:.x.:.---:..:::.x:.:..::::.-..xxx....x---.x..:x:..x.x..xxx:.x:.:......x..xx:..xx.x:.x.x.x..:.::.x...x.x:x.----:.....x:x...:--------....----..:.....:x.x.x......--..xx.xx....-...::....::.x.x..::.....:x:....:........x.:....:::.xxx....x.::.....:..x.xx.::..x..:..x.x...:..:..:x....x..:.....:.::.x...x.......xx.::x.... 50M4I22M1D273M1I23M1I9M3D18M1I10M3D65M4D13M8I4M4D20M2I11M1I139M 398/657 60.6% 675/94230402 0.0% 33/657 5.0% 16344196 NA +24668 chr4 + 190214555 69638894 69638893 69639619 726 CTTACCTAAAATTTTGCTATAGTATGAATTCCATTCTCCCCAGTAGGACTGAAATATATAGTCTTGCAGAGAATAAGATATGGTATTTTTAATCCTTTCACCAAAGGTCATCTGGTCAGTGAGCTCTGATAAGGCTGCCGGTACATAGGAGACTGGTGCTGGGATTTTCCCACAGTGTCTCTCCACTGTTGATGCTGGAGAGAACCTCAATGTGTACATAAATGGAATTCCTAATTTCAGAGCAACAAGATCACCACAGATTGTTACTGGGTCTGCTACCAACACATCAAAACCACCTTTCTGAAGTCTTGCCATCAACTTTGGGTTCTTTAGTACACCATCACAGAGTTGTATGTTAATTTGAAAGAAAGTGTCTAGAAGTTTTCCTAGTTCTTTGTAGAAAGCCCATATTGTGAGAGGAGTTGGTCTATGGTCAATCCACAGCATTATCATATGCTCAATTAAGGAATCTATATTGCTCTTCTTGTAGGAAACAGGTATC-ACTTCAAAATTCACAGGAGAATCGGGATTGGAGTTGATGAATAGAGTTGCTGATGAAGCCAGTACAGTCACATTGTGATTTCTTTGAATCAACTCTTCTAGAATAATCTTAATATTTAACCAATGGCTACCATCTGTAGGCCAAATTAACACATTCCCACTTAGAACAACTTCAGTCAGAGTCAAATTAAAAACCAGCATCTGGACAAACTTCTTAGGCATGGT chr4 + 94230402 53300225 53300224 53300950 53300225 53300224 53300950 726 CTTACCCAAGATCTTGCTGTAGTAGATGTCCCATTCTCCCCAGTAGCTCTGGAAAATGTAGTCTTGCAAGTGATAAGACAGGATATTTTTAATTCTCTCGCCAAAGGACATGTGGTCAGTGAGCTCAGACAGGGCCGCAGGTGTGTAGGATGGTGGGGCTGGGATCTTGCCACAGTGCCTCTCAACAGTCGAGGCTGGAGAGAAGCGCAGGGAGTACACAAAAGGCAGTGCCAGCTTGAGAGCTACGAGGTCCCCGCATGGAGTCACTGGGTCTGACAGCAGCAGGTCGTAGCCAGAGCCCTGCAGATGGGCCATCAGCTCCTGGTTGGTCAGCACTGCATCGCACATCTGCCTGTTGACCTGGTGCCAGCTTTTGGACAGTTTCCCCAGCTCCTTGTAAAACTGCCAGAAGGTCGAAGCTGTTGGCCTGTTGTTCAGCCATAACGTCATGATGTCTTCAATCAGGTTTGCAATGGTGTCTTTCTTGAAGGGCAC-GTTATAGACCTCAAACTTCTCGGTGGTCTCAGCCTTTGGCTGAATGAAGAGGGAAGCATTGGACACCAGGATGGTAACGCTGTGCCCACGGCGGATGAGCTCCTGAATAACCATCTTCACGTTTAGCCAGTGGCTGCCCTCCGTTGGCCAGACCAGCACATTCCCACAGAAGACAGGTGCTACCAGAGCCACATGGAAAGCAAGAAGCTGGAGGCATTTCTTGAAGCTGGT ......:..:..:.....:.....x:x:.:................xx...:..x..:..........::x:......:.x.:..........:..:..:.......x...x..............x..:.:...:..x...:::.....x:x...x........:..x........:.....x..x..:..x...........x.x..:x.x.....:...x..x.x.x.:.::..x.....x..:..:..x..:..x:xx..:..........x:.x..:..x:..:x.:...xxx::...x..x:xx.......:..::x....xx.:..:..xx....:..x.x:..:x....:.::..:x:xx.:x.x.:x::x.....:..:..:..:.....:..xxx...x.xx..x::..xx.....:..:.x..:x.x...:.:.:.:..x..:.x:.....:.:.xxxx.x..:x..:::......x...:x..-.x...x-..:.....x...x.:.x:.xx..:.xx..x.:x.x:.....x..:.xx..xxxx..x:....x.::..x..::....x::x.xx:.:..x.:...:.xx.x..:x.....x.::....:...:.....:..x..:..x.....:.::.:...........xx.::...:x.x.x::.....:..x..x:...:.x..x.x.....x:x.:.....:::xx.... 495M1D6M1I224M 470/725 64.8% 726/94230402 0.0% 2/725 0.3% 16338669 NA +22169 chr4 + 190214555 69646901 69646900 69647633 733 AAGTAATAAAAACAAAATTTGTTACA---TACCTAAAGCTTTACTATAGTATGAATCCCATGATTTCCAAAGAGTTTCAAACATGTAGTCCTGTAGGTGGTAGGAGATGAAATTTCTTATTCTGTCAGTGAAAGACATTTGGTCGGTGAGTTCTGATAAAACAGCAGGAACATAGGAAGGAGGGTATGGTACCTTCCCACAGTGCTTTTCCACTGTTGAGGCTGGAGAAAACCTCAAGGAGTACATAAATGGAATTCCAAGTTTTAAAGCTACTATATCGCCACAAGGAAATACTGGATCAGACACCAGGACTTCAAACTTGCTTTTCTTTAGCTTTGCCATCAGCTGTTGGTTTTTAAGAACGCCATCACAGATCTCCTGAGACACCATGTGGAAGTCCTTGATTACTTTGGCCATCTCCTGATAGAATCTCCAAATGGTTGAAGGAGATGGTCTATTTTCCAGCCATGTCAAAACGAAGTCCTTAATTACTCCTTCTATTCTTTCTTTGCCAAAGGGCACCTTATATATTTCAAATGTCAGAGATGGGTTAGAGGTTGGTGTGATGAAAAGTGCACCAGAGGCAACTAGGACAGTCACATTATGCTCCTTTTTAATGAGCTCATCTATAATTATCTTAACATTTAGCCAATGACTACCTTCCATTGGCCAAATCAAAACATTCCCACCAAGAGTGGTTCCTATGAGACTTATCTGAAGGGAGAACAGCAGAAGG chr4 + 94230402 53300198 53300197 53300933 53300198 53300197 53300933 736 AAGTGATGAAAAGCTATGTAGCAACAGCTTACCCAAGATCTTGCTGTAGTAGATGTCCCATTCTCCCCAGTAGCTCTGGAAAATGTAGTCTTGCAAGTGATAAGACAGGATATTTTTAATTCTCTCGCCAAAGGACATGTGGTCAGTGAGCTCAGACAGGGCCGCAGGTGTGTAGGATGGTGGGGCTGGGATCTTGCCACAGTGCCTCTCAACAGTCGAGGCTGGAGAGAAGCGCAGGGAGTACACAAAAGGCAGTGCCAGCTTGAGAGCTACGAGGTCCCCGCATGGAGTCACTGGGTCTGACAGCAGCAGGTCGTAGCCAGAGCCCTGCAGATGGGCCATCAGCTCCTGGTTGGTCAGCACTGCATCGCACATCTGCCTGTTGACCTGGTGCCAGCTTTTGGACAGTTTCCCCAGCTCCTTGTAAAACTGCCAGAAGGTCGAAGCTGTTGGCCTGTTGTTCAGCCATAACGTCATGATGTCTTCAATCAGGTTTGCAATGGTGTCTTTCTTGAAGGGCACGTTATAGACCTCAAACTTCTCGGTGGTCTCAGCCTTTGGCTGAATGAAGAGGGAAGCATTGGACACCAGGATGGTAACGCTGTGCCCACGGCGGATGAGCTCCTGAATAACCATCTTCACGTTTAGCCAGTGGCTGCCCTCCGTTGGCCAGACCAGCACATTCCCACAGAAGACAGGTGCTACCAGAGCCACATGGAAAGCAAGAAGCTGGAGG ....:..:....xxx.xx.x.:x...---....:..::::..:..:.....x:x:......xx.::...:x::x.:.x:..x........:..:.:...:..:..x.x..x....:.x.....x..:x::..:.....x.....:.....:..x..:.:::.x.....x:::.....x..x...xx...x.:...x.........:.:..x..x..:...........:..x.x..:........:...x..x.x.x.x..:..x.:......x.x:..x..:..x...:x:.....:..x....x...x.xx..:x.x:::xxx::..x:..x.xx..........x:.....xx.x..x..xx....:..x....x.:x:xxx...xx...xx..:::...:x:.x...xx...x.....x:..:..::x...:.x...:....xx.x...:..:..x.:.......:x.:xx.:..x...:.:...:.xx::.x.x..xx.x.....x:::........x.....x.::.....:x..xx:.xx.xx.:..xxx....:xx:.....:..x.x.x..xx..xx..:....::..x..::.:...:.x:xx:x:........x.xx....::.....x..:........:..:..:..:...:.......:.:..:x..........x:.:::::.x.x...:x...x::.:x..:.::.x:.:x...x.:... 26M3I707M 459/733 62.6% 736/94230402 0.0% 3/733 0.4% 16346703 NA +10202 chr4 + 190214555 69646927 69646926 69647588 662 TACCTAAAGCTTTACTATAGTATGAATCCCATGATTTCCAAAGAGTTTCAA---ACATGTAGTCCTGTAGGTGGTAGGAGATGAAATTTCTTATTCTGTCAGTGAAAGACATTTGGTCGGTGAGTTCTGATAAAACAGCAGGAACATAGGAAGGAGGGTATGGTACCTTCCCACAGTGCTTTTCCACTGTTGAGGCTGGAGAAAACCTCAAGGAGTACATAAATGGAATTCCAAGTTTTAAAGCTACTATATCGCCACAAGGAAATACTGGATCAGACACCAGGACTTCAAACTTGCTTTTCTTTAGCTTTGCCATCAGCTGTTGGTTTTTAAGAACGCCATCACAGATCTCCTGAGACACCATGTGGAAGTCCTTGATTACTTTGGCCATCTCCTGATAGAATCTCCAAATGGTTGAAGGAGATGGTCTATTTTCC------AGCCATGTCAAAACGAAGTCCTTAAT----TACTCCTTCTATTCTTTCTTTGCCAAAGGGCACCTTATATATTTCAAATGTCAGAGATG--GGTTAGAGGTTGGTGTGATGAAAAGTGCACCAGAGGCAACTAGGACAGTCACATTATGCTCCTTTTTAATGAGCTCATCTATAATTATCTTAACATTTAGCCAATGACTACCTTCCATTGGCCAAATCAAAACATTCCCACCA chr4 + 94230402 53297399 53297398 53298060 53297399 53297398 53298060 662 TACCTAAAATATCACTGTAGAATTGATTCCAATGTCCCCAGAGAACGTAATGGTATGCGAGGTCCTGCAGAGCATAGGAGAACATGTTTTTTAGCCTCTCTGTGAAGGTCATCTTGTCTGTTAGGGAGCTTAGGCTGGCTGGCACGTAGGAAGGAGGTGCTGGGAGCCCCCCGCAGAGCCGCTCCACAGTGTTGCCCATGGAGAACCGGATGGTGTACACCAAAGGGATACCCAGCTTCTCTGCAAACAGCTCCCCGCTGGGCATCAGTGGGTCTGCCAGGAGGACATCAAAGGCAGATGTCCTCAGCCTTTCCAGCAGCACCTTGTCCTTCAAAACTGCATCGCAAATGGTTCTGGTTATATTCTCAAACTTGCGTAGCAGATCAATCATCTTGTAA-AGACTTTCCCAG--------AAAGGTAACCTTCTCTCCTCATAGAACCA----AAAATAGAAACCTTCATCCATTGCGGCAGCCATCTCACTTTTGCTGATTGGCACCTCAATCATCTCAAACTGGAAAGGTGAGGGCTGGGTGCCATTGAGGATAAGGAAGCACGA-AGGCAGC-AGCACAGTCACCTCATGGCCCCGGGCTACAAGTTCGTGCAGGATATACTCCACGTTGAGCCAGTGGCTGTTGTCAACTGGCCAGACCAACACCTTCCCACCA ........::x.:...:...x..x:..:...xx:.::...:...::x.x.x---.:::.x:......:..:xx:.......xx.x:...:...x:..x..x.....:.x...:.x...x..x..xxxxxx..::x::..x..x..:...........xxx...x.x.::...:...x..:x:.....x..xxx.x.::x:..:....xx.x..x.....:x..x..:..x..x..:..:xxx..x.x:.xx..x..:.x:..x.x:.x...:..x.x..xx.....x.....xx::xx.x..:.:...:..x...x....xx:.x..::..x.:...xx....:..:..xx:::x:.x:.:xx.x.x:..x.:x:xx.x:.xx.::::.....:x.:.-...x.:...x.:--------::..:.:::..x:.:...------.:...----....:::.:x....x..----.:.xx.xx.:..:::x::.....::.xx.......:.xx:..:.....:xxx.:..:..--..:.:.:x.:::x..x.:xx..:::x....x.-.....:.-..x........x.:...x:..:xxx:x.::..:..:.x:.x:..xxx..:x..:..x.....:..:..:::x..x.:......:.:...x..x......... 51M3I344M1D12M8D18M6I5M4D17M4I59M2I32M1D7M1D102M 373/647 57.7% 662/94230402 0.0% 30/647 4.6% 16349528 NA +4099 chr4 + 190214555 69727063 69727062 69727207 145 TCTTCAGATGTGTGATTTAGACACTTTAAATCTCTGTGCGGAATTGAAGTGCAGTTTTGGACATTTCTGTCTCATAAATAGCATCAAATTTCTCATTTTGGGCCACGGTGAAGTAATTCTTCCAGTCACCAGCCGTCCCTAAAGG chr4 + 94230402 53306768 53306767 53306905 53306768 53306767 53306905 138 TCTGAAGGTATGTGA----GAC---TCAGATTTCTGTGCGGAAGCGCAGGTCAGTGCCCGCCATCTTCTGAGCATAGTACTGGTCAAAGTGTGCACTCTGGGCCACAGTGAAGTGGTTCTTCCAGTCACCGGTGATGCCTGGGGG ...xx..:.:.....----...---.:.:..:...........x:.x..xx....x::x.x...:.::xxxx....:xxxxx:.....x.x:x..:.:........:.......::..............:.:x:.x...:::.. 15M4D3M3D120M 90/138 65.2% 138/94230402 0.0% 7/138 5.1% 16420295 NA +4172 chr4 + 190214555 69727081 69727080 69727207 127 AGACACTTTAAATCTCTGTGCGGAATTGAAGTGCAGTTTTGGACATTTCTGTCTCATAAATAGCATCAAATTTCTCATTTTGGGCCACGGTGAAGTAATTCTTCCAGTCACCAGCCGTCCCTAAAGG chr4 + 94230402 53309809 53309808 53309935 53309809 53309808 53309935 127 AGGCACCTCAGATGTGTGTGCGGAAGCGCAGGTCAGTGCCCGCCATCTTCTGAGCATAGTACTGGTCAAAGTGTGCACTCTGGGCCACAGTGAAGTGGTTCTTCCAGTCACCGGTGATGCCTGGGGG ..:...:.:.:..x.x.........x:.x..xx....x::x.x...:.::xxxx....:xxxxx:.....x.x:x..:.:........:.......::..............:.:x:.x...:::.. 127M 80/127 63.0% 127/94230402 0.0% 0/127 0.0% 16417272 NA +3700 chr4 + 190214555 69727146 69727145 69727231 86 TCAAATTTCTCATTTTGGGCCACGGTGAAGTAATTCTTCCAGTCACCAGCCGTCCCTAAAGGTAAATAAAAAAACATAGGAAAGAA chr4 + 94230402 53312953 53312952 53313038 53312953 53312952 53313038 86 TCAAAGCGCTCATTCTGGGCCACAGTGAAGTGATTCGCCCAGTCGCCGGAGATGCCTGAGGGGGTAGAAAAGCACGTGAGGCAAAA .....x:x......:........:.......:....x:......:..:.xx:.x...:.:..x:x.x....:x..:.::.:x.:.. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 16414193 NA +4549 chr4 + 190214555 69733362 69733361 69733509 148 ACAGCATGATGCAGTGGGGAAATTATCCAGAATCCATATCTA--CCATTTT-ACCTCTTTCATATCTTCATAGTACAAAAAAAGTATTGGGTGTTCTTCCTTTTTCTTCCACCAGTTTTTAACATGAGTAAACCAGGAACCATAGGCCACT chr4 + 94230402 53313333 53313332 53313483 53313333 53313332 53313483 151 ACGGCTTGGGGCAGCAGGGGTGGGCTCCAGACCCTCCCTCCAGACTATCCTCACCTTCTTCATATCCTCATAGAAGAGGTAGAGAAGCCGCTTCTCGTGCCTCTTCTCCCACCAGCCCTTCACATGCTTGTACCAGGACCCATAGGCCACT ..:..x..:x....::...:x:xxx......x:.:x:x..:.--.:..::.-....::........:......x.x.::x.:..x.x:x.x.x:..x.x.:.:....:.......:::..x.....xx.:x.......x............ 42M2I7M1I99M 96/148 64.9% 151/94230402 0.0% 3/148 2.0% 16420029 NA +4061 chr4 + 190214555 69733409 69733408 69733509 101 TTACCTCTTTCATATCTTCATAGTACAAAAAAAGTATTGGGTGTTCTTCCTTTTTCTTCCACCAGTTTTTAACATGAGTAAACCAGGAACCATAGGCCACT chr4 + 94230402 53310249 53310248 53310349 53310249 53310248 53310349 101 TCACCTCCTTCATGTCCTCATAGAAGAGGTAGAGGATGGGGTGCTCCTGCCGGCGCTCCCAGTAGCCCCGCACGTGGTCAAACCAAGAGCCATAGGCCACT .:.....:.....:..:......x.x.::x.:..x..x.....:..:.x.:xx:x..:...x:..::::xx..:..:x:......:..:............ 101M 66/101 65.3% 101/94230402 0.0% 0/101 0.0% 16423160 NA +4061 chr4 + 190214555 69733409 69733408 69733509 101 TTACCTCTTTCATATCTTCATAGTACAAAAAAAGTATTGGGTGTTCTTCCTTTTTCTTCCACCAGTTTTTAACATGAGTAAACCAGGAACCATAGGCCACT chr4 + 94230402 53307219 53307218 53307319 53307219 53307218 53307319 101 TCACCTCCTTCATGTCCTCATAGAAGAGGTAGAGGATGGGGTGCTCCTGCCGGCGCTCCCAGTAGCCCCGCACGTGGTCAAACCAAGAGCCATAGGCCACT .:.....:.....:..:......x.x.::x.:..x..x.....:..:.x.:xx:x..:...x:..::::xx..:..:x:......:..:............ 101M 66/101 65.3% 101/94230402 0.0% 0/101 0.0% 16426190 NA +7209 chr4 + 190214555 69734130 69734129 69734286 157 CCACATACCTTTTCCAGTTAAGAATTTCTCCAGATATTCTTCCCAGGTACCAGGAAAAGGCTGTAAATTATTCATTAAGTCAAAATGGTAATATGAGACTGAAACATCCTTGGCATTACGAGCCAGATAAATCATCTGCAGTGGGG--GGTGGGGGTAG chr4 + 94230402 53310422 53310421 53310580 53310422 53310421 53310580 159 CCCCCCACCTTTGCCAGCCATGAAAGCCTCCAGGTACTGGTCCCATGTCCCTGGGTGAGGGTGCAGCTTGTTCATCAGGTCAAAGTGGTAGTAGGAGACAGCTACATCCTTGGCATTGCGGCCCACATAGATCATCTGCAGAGGGGCTGGTGTTGGTGG ..x.x:......x....::.x...xx:......:..:.xx.....x..x..x..:x:...x..:.:x..:.....:.:......:.....:..x.....x.xx..............:..:x...x...:...........x....--....xx...:. 146M2I11M 115/157 73.2% 159/94230402 0.0% 2/157 1.3% 16423708 NA +6077 chr4 + 190214555 69734136 69734135 69734286 151 ACCTTTTCCAGTTAAGAATTTCTCCAGATATTCTTCCCAGGTACCAGGAAAAGGCTGTAAATTATTCATTAAGTCAAAATGGTAATATGAGACTGAAACATCCTTGGCATTACGAGCCAGATAAATCATCTGCAGTGGGGGGTGGGGGTAG chr4 + 94230402 53307393 53307392 53307543 53307393 53307392 53307543 151 ACCTTTGCCAGCCATGAAAGCCTCCAGGTACTGGTCCCATGTTCCTGGATGTTGTTCAAACTTATTCATCAGGTCAAAGTAGTAGAAGGAGACAGCCACGTCCTTGGCATTGCGACCCACGTAGATTATCTGTGGAAGAGGCTGCGGACAG ......x....::.x...xx:......:..:.xx.....x..x..x...x:xx.:.xx..x........:.:......:.:...:x.x.....x.xx..:...........:...x...x:..:..:.....::.x:.:..x..x..::.. 151M 103/151 68.2% 151/94230402 0.0% 0/151 0.0% 16426743 NA +4606 chr4 + 190214555 69749718 69749717 69749821 104 TACCTTGCAATTGTTTTCCCAGAAAGATTTAGGAAGAAGATCAGTCGGTAGATGTGTTTTCACAATCCGGGGTGATGGATTCTTCTCCAATTGTTCTATACCTG chr4 + 94230402 53313799 53313798 53313902 53313799 53313798 53313902 104 TACCTTGCAGTCTTTCTCCTGGAAGGAGGCCGGGAGGAGGTGGACTGGCAGGTGAGTCTTCACCAGCCGTGGGGATGGGATTTTCTCCAGCTGTTCGACACCTG .........:.:x..:...::...:..xx:x..:..:..:.x::::..:..:..x..:.....x.x...x..x.....:x.:.......::.....x.:..... 104M 70/104 67.3% 104/94230402 0.0% 0/104 0.0% 16435919 NA +3438 chr4 + 190214555 69790937 69790936 69791111 175 ATGTAAATTGTATAGCATAGTTTGCGGCACAATTTAAGTACTCAGTAAATGTCAGCTGCTAGTATTGTGGCTGTTTTGTAAGCTCTCATAATTATTTCTCTGTGTATACATT---------------------TTTATTTTGTTTTTTTTTTTTTTTTTTTTGAGAGACTCTTATTTTTTTAAAGCAGTTTTAGGT chr4 + 94230402 83190407 83190406 83190582 83190407 83190406 83190582 176 ATGTGAATTGGA---CATAGTTTA-AGCACAAATTT-GTGCTCAATTG--------TGTCTGTACTGGGCACAGTTTATAAGAGCACACATTTGT------GTGCAAACACTGATCCTAGACTGCATTTCCCATCAATTTTGCTTTTTTTTTTTTTTTTTTTGGAAGACTTTTGTAGTTTTGGAATA-CTTTAGGT ....:.....x.---........:-:......x..x-..:....:.x:--------..::x...:..x.xx::x...:....xx.x..:.x..:.------...:.x...:.---------------------.:x......:....................::.....:..:.xx....::.::.-:....... 12M3D9M1D11M1D11M8D39M6D11M21I54M1D8M 111/155 71.6% 176/94230402 0.0% 41/155 26.5% -13399470 -80830932 +3447 chr4 + 190214555 69791030 69791029 69791100 71 ATTTCTCTGTGTATACATTTTTATTTTGTTTTTTTTTTTTTTTTTTTTGAGAGACTCTTATTTTTTTAAAG chr4 + 94230402 26123044 26123043 26123107 26123044 26123043 26123107 64 ATTTCTGTGTGTGT-------TTTGTTGTTTTTTTTTGTTTTTTTTTTGAGAGGATTTTTTTTTTTTTAAG ......x.....:.-------.x.x............x...............:x.:..x.......x... 14M7D50M 54/64 84.4% 64/94230402 0.0% 7/64 10.9% 43667986 NA +3346 chr4 + 190214555 69791927 69791926 69792007 81 TCAAATTTCTCATACTGGGCTACAGTGAATTGATTCTTCCAGTCTCCTGAAACACCTAAAAAGAAATATAAAATAACACAT chr4 + 94230402 53312953 53312952 53313029 53312953 53312952 53313029 77 TCAAAGCGCTCATTCTGGGCCACAGTGAAGTGATTCGCCCAGTCGCCGGAGATGCCTGAGGGG----GTAGAAAAGCACGT .....x:x.....x......:........x......x:......x..x..:.::...:.:::.----:..:..x.:...:. 63M4D14M 55/77 71.4% 77/94230402 0.0% 4/77 5.2% 16478974 NA +4703 chr4 + 190214555 69797698 69797697 69797802 105 CTTCTTACCTCTTTCATGTCTTCATAAAATAGGTAAAGGATACGATAATCTTTCTTCTTTTCCCACCAGCCCTTCACATGGTCATACCAGGAACCAAAACACACT chr4 + 94230402 53307215 53307214 53307319 53307215 53307214 53307319 105 ccccTCACCTCCTTCATGTCCTCATAGAAGAGGTAGAGGATGGGGTGCTCCTGCCGGCGCTCCCAGTAGCCCCGCACGTGGTCAAACCAAGAGCCATAGGCCACT .::..:.....:........:.....:..x.....:.....:x.:.:x..:.x.:xx:x:.....x:.....:x...:......x....:..:...x.:xx.... 105M 72/105 68.6% 105/94230402 0.0% 0/105 0.0% 16490483 NA +4703 chr4 + 190214555 69797698 69797697 69797802 105 CTTCTTACCTCTTTCATGTCTTCATAAAATAGGTAAAGGATACGATAATCTTTCTTCTTTTCCCACCAGCCCTTCACATGGTCATACCAGGAACCAAAACACACT chr4 + 94230402 53310245 53310244 53310349 53310245 53310244 53310349 105 CCCCTCACCTCCTTCATGTCCTCATAGAAGAGGTAGAGGATGGGGTGCTCCTGCCGGCGCTCCCAGTAGCCCCGCACGTGGTCAAACCAAGAGCCATAGGCCACT .::..:.....:........:.....:..x.....:.....:x.:.:x..:.x.:xx:x:.....x:.....:x...:......x....:..:...x.:xx.... 105M 72/105 68.6% 105/94230402 0.0% 0/105 0.0% 16487453 NA +5357 chr4 + 190214555 69797699 69797698 69797802 104 TTCTTACCTCTTTCATGTCTTCATAAAATAGGTAAAGGATACGATAATCTTTCTTCTTTTCCCACCAGCCCTTCACATGGTCATACCAGGAACCAAAACACACT chr4 + 94230402 53313380 53313379 53313483 53313380 53313379 53313483 104 TCCTCACCTTCTTCATATCCTCATAGAAGAGGTAGAGAAGCCGCTTCTCGTGCCTCTTCTCCCACCAGCCCTTCACATGCTTGTACCAGGACCCATAGGCCACT .:..:....::.....:..:.....:..x.....:..:.xx..x.xx..x.x.:....:....................x.::........x...x.:xx.... 104M 77/104 74.0% 104/94230402 0.0% 0/104 0.0% 16484319 NA +3031 chr4 + 190214555 69800035 69800034 69800107 73 ACAGAGAGATTGAAATCATAATGAAGAAATTATTAAGCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGGATG chr4 + 94230402 46134742 46134741 46134814 46134742 46134741 46134814 73 ACAGGGGAATGGGAGTTTTCAGGAAATCACTTGTAAACAAGCAAAGGAGAAAAAAAAAAAAAAGAAAGGGATG ....:.::..x.:.:.:x.x.x...:xx.:.xx...:...:x...::.:..........:.......:..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 23665293 NA +3097 chr4 + 190214555 69800059 69800058 69800116 58 AGAAATTATTAAGCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGGATGTGGAGGAAA chr4 + 94230402 92119537 92119536 92119594 92119537 92119536 92119594 58 AGAGATTTTAAAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAA ...:...x.x...::................:...x.......:.x..xx:.::.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -22319478 -71910924 +6245 chr4 + 190214555 69800747 69800746 69800893 147 CAGGACTCACACTTTCCAGTCATGAATTTTTCCAGGAACTCCTCCCAAGTTCCAGGATCTGGGTGCATTTTTGCCATCTGGCGGAAATAATAATAAGACACAGCCACATCTTTGGCATTCCATGCCATGTAGATCATCTGTGGAGAG chr4 + 94230402 53313568 53313567 53313714 53313568 53313567 53313714 147 CAGCCCCTACCTTTCCCATCCATGAATGCCTGCAGAAACTCGCTCAGTGTGCCAGGATCAGGGTGGATCTTGGCCATCTGGTAGAAGTAGTAGTAGGAGATTACGACGTCCTTGGCGTTGCGAGCCATATAGATTACCTGAAGGGAG ...xx.::..x:..:...x:.......x::.x...:.....x::.x:x..x........x.....x..:..x.........::...:..:..:..:..x.:x:.x..:..:.....:..x.:x.....:.....:.:...x:.:... 147M 99/147 67.3% 147/94230402 0.0% 0/147 0.0% 16487179 NA +5800 chr4 + 190214555 69800752 69800751 69800918 167 CTCACACTTTCCAGTCATGAATTTTTCCAGGAACTCCTCCCAAGTTCCAGGATCTGGGTGCATTTTTGCCATCTGGCGGAAATAATAATAAGACACAGCCACATCTTTGGCATTCCATGCCATGTAGATCATCTGTGGAGAGATTTGAAAAAGCAGGACTTTGTTTC chr4 + 94230402 53307390 53307389 53307554 53307390 53307389 53307554 165 CCCACCTTTGCCAGCCATGAAAGCCTCCAGGTACTGGTCCCATGTTCCTGGATGTTGTTCAAACTTATTCATCAGGTCAAAGTAGTAGAAGGAGACAGCCACGTCCTTGGCATTGCGACCCACGTAGATTATCTGTGGAAGAGGCTGCGGA--CAGCACCTGGTTCC .:...x:..x....:......xx::......x...xx.....x.....x....x.x.x.xx.x:..xx:....x..:x:..:..:..:x.:..x........:..:........x.:xx...:......:.........::::x:..x::.--...x..:.x...:. 151M2D14M 110/165 66.7% 165/94230402 0.0% 2/165 1.2% 16493362 NA +4768 chr4 + 190214555 69809822 69809821 69809927 106 TATCTTACAGTTATTCTTCCAAAATGAAGAAGGGAGAAGTTGAACAGGCAGGTGTGTTTTCACTAATTGAGGAGACTGCATGTTTTGCAACTGCTCAACACCTACA chr4 + 94230402 53313799 53313798 53313904 53313799 53313798 53313904 106 TACCTTGCAGTCTTTCTCCTGGAAGGAGGCCGGGAGGAGGTGGACTGGCAGGTGAGTCTTCACCAGCCGTGGGGATGGGATTTTCTCCAGCTGTTCGACACCTGCA ..:...:....:x....:.:::..x..:.xx.....:..x..:..x........x..:.....:.:::.x..:..:x.x..x..:.x..:...:..:......:.. 106M 72/106 67.9% 106/94230402 0.0% 0/106 0.0% 16496023 NA +4432 chr4 + 190214555 69810753 69810752 69810900 148 CCAGGAATTATAAGTTCCATGAAAGTCACTCGCTTGTATATTGCATCACGTTTACATTTCTCTGCATCCCCATTGTTAAAGATCAAATCCAATATTTCACTGATCCAGGTCATCCCTAAGGAAA-------------GAAAATATTAACAAAACTTTAAAC chr4 + 94230402 53307829 53307828 53307989 53307829 53307828 53307989 161 CCAGGGGCAACAAACTCCAACATGGGTACCCGGTTGACGATGGCATCCCGTTTGCACTTCTCTGGGTCACCGCCTTGCAGGATCATGTCCACAATCTCACTGACCCAAGTGGTGCCTGGGGAAATTGGCCCATCAGGGAAGGTACTGAAGAGACTCTCAGC .....:::x.:..::....xx.x:.x:..:..x...xxx..x.....x.....:..:.......x:..x..:::x.xx.:.....x:....xx..:.......:...:..x:.x...::.....-------------...::..:.:.x:.:...:.x.:. 124M13I24M 94/148 63.5% 161/94230402 0.0% 13/148 8.8% 16502924 NA +3312 chr4 + 190214555 69817267 69817266 69817340 74 TATATATATATATGTGTGTGTGTAT--ATATATATATATATATGTATATATATATATATGTATATATATATATGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .:.:.x.:.:.:.............--..:..x::...:.......x...:..:.x....:.:.:...:.:.::.. 25M2I49M 52/74 70.3% 76/94230402 0.0% 2/74 2.7% -16017274 -78213128 +3113 chr4 + 190214555 69840907 69840906 69840997 91 GTGGTGGCGGCCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGCGGGAACCCAGGAGGTGGAGCTTGCAGTGAGCATGA chr4 + 94230402 76033201 76033200 76033284 76033201 76033200 76033284 84 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA--GAACATGA ......-----.:.x......:...........:.........x.xx.x...xx:.xx........:..x.xx:.x:..:.--..:..... 6M5D70M2D8M 62/84 73.8% 84/94230402 0.0% 7/84 8.3% -6192294 -88038108 +4065 chr4 + 190214555 69849429 69849428 69849572 144 GTTCCTACCCTGTCCTTGCATGAATTTCTCCACAAACTCTGGAAAGGATCCAGGATTTGGATGACCAGCCACCATTAGAAAGAAATAATAAAAGGAAACAGCCACATCCTTTGCATTCCGGCAAAGATAGATTATCTAAGAGGA chr4 + 94230402 53313570 53313569 53313713 53313570 53313569 53313713 144 GCCCCTACCTTTCCCATCCATGAATGCCTGCAGAAACTCGCTCAGTGTGCCAGGATCAGGGTGGATCTTGGCCATCTGGTAGAAGTAGTAGTAGGAGATTACGACGTCCTTGGCGTTGCGAGCCATATAGATTACCTGAAGGGA .::......:.x:..x.x.......x:..x..x......xxxx.:x.xx.......:x..:..:x:xx:x:....:x.:x....:..:..:x....:.:x:.x..:.....x..:..x..:xxx.x........:..:.::... 144M 88/144 61.1% 144/94230402 0.0% 0/144 0.0% 16535859 NA +3198 chr4 + 190214555 69849501 69849500 69849571 71 CATTAGAAAGAAATAATAAAAGGAAACAGCCACATCCTTTGCATTCCGGCAAAGATAGATTATCTA-AGAGG chr4 + 94230402 53310494 53310493 53310565 53310494 53310493 53310565 72 CATCAGGTCAAAGTGGTAGTAGGAGACAGCTACATCCTTGGCATTGCGGCCCACATAGATCATCTGCAGAGG ...:..:xx:..:.::..:x....:.....:........x.....x....xx.x......:....:-..... 66M1I5M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% 16539007 NA +3521 chr4 + 190214555 69849501 69849500 69849574 74 CATTAGAAAGAAATAATAAAAGGAAACAGCCACATCCTTTGCATTCCGGCAAAGATAGATTATCT----AAGAGGATG chr4 + 94230402 53307459 53307458 53307536 53307459 53307458 53307536 78 CATCAGGTCAAAGTAGTAGAAGGAGACAGCCACGTCCTTGGCATTGCGACCCACGTAGATTATCTGTGGAAGAGGCTG ...:..:xx:..:..:..:.....:........:.....x.....x..:.xx.x:..........----......x.. 65M4I9M 56/74 75.7% 78/94230402 0.0% 4/74 5.4% 16542042 NA +4366 chr4 + 190214555 69855325 69855324 69855429 105 ATTCCAGGAAAGGTATTCGATTAAAAATTACATCTTCTTTGCACTTTTCCACATCACCCTCTTTATAGATCATATACACAATTTCACTAACCCAGGTTGTACCTG chr4 + 94230402 53310912 53310911 53311016 53310912 53310911 53311016 105 ACTCCAACATGGGTACCCGGTTGACGATGGCATCCCGCTTGCACTTCTTGGGGTCACCACCTTGAAGGATCATGTCCACGATCTCACTGATCCAGGTGGTGCCTG .:....:x.x:....::..:..:.x:..x:....::x:........:.:x:x:.....x:...x.x:......:.x...:..:.....:.:......x..:.... 105M 69/105 65.7% 105/94230402 0.0% 0/105 0.0% 16544413 NA +3101 chr4 + 190214555 69862473 69862472 69862513 41 TTCTCAAAAAAAACCCAAAAAACAAACAAACAAACAAAAAA chr4 + 94230402 26431516 26431515 26431556 26431516 26431515 26431556 41 TTTCCAAAAAAAAACCAGAAAACAAACAAACAAACAGAAAA ..::.........x...:..................:.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 43430957 NA +3486 chr4 + 190214555 69877969 69877968 69878050 82 ACCATGGCCCACGCCTCTAGTCCCAGATGCTTGGAAGGCTGAGGCAGGAAGATTGCTTGAACCCAGAAATTCTGGACTATAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:...:x....--.x....:....x.:....:.........x.xx.x::.x::.............::.:...:..:... 13M2D67M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% -6155229 -88075173 +3182 chr4 + 190214555 69935420 69935419 69935491 72 TGCACTTGTGGTTCCAGCTACTTGGGAAGCTGAGGTGTGAGGGTCACTTGAGCATGGGCGGTTAAAGCTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....x...:..............::.:......x:x..x.::x.......:.x::.:x.x..x::....:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -6097785 -88132617 +3608 chr4 + 190214555 70079914 70079913 70080009 96 AAAGAAAAAAATATATATATACACACACACATATATATACATGTATATACATATATATATATATATAAAATCTCAACTCTTTCTTCCCCTCAACTT chr4 + 94230402 58988593 58988592 58988684 58988593 58988592 58988684 92 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATGACA----AATTTATTCTTACTGTCAATTT ...:..:...x..........:.......::......x......x.xx.:.x::..x....xx...:.x.----..:.:x.....x.:x....:.. 70M4D22M 66/92 71.7% 92/94230402 0.0% 4/92 4.3% 11091321 NA +3184 chr4 + 190214555 70082322 70082321 70082390 69 AGAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAACAAAA chr4 + 94230402 42234771 42234770 42234839 42234771 42234770 42234839 69 AGAAAAAAGAAAAATAAAAAAAAAGTGAAGCAAGATTAATAAGAAACAGGGAAAGTAGATAAAACAAGA ........:.....x......:...x:...x..::xx..x..:.:.x.:.:....x.:.:.......:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 27847551 NA +3333 chr4 + 190214555 70089682 70089681 70089769 88 AATAAAATTAAAAATAAAAACAAGAGAAAAAGAAAAAGAAAAGAAAAGGAAAGAAAGAAAAGAAGAAAAGAAAAGAAAAGAAAAAGAC chr4 + 94230402 91777247 91777246 91777331 91777247 91777246 91777331 85 AGTGAAACTGCAAAACAAAACAATAAAGAAA---AAAGCAAGGAGGAGGTAGGAAGGAGGAGAGGAAAAAAATAGAAAAGCACCAGGC .:.:...:.:x...xx.......x.:.:...---....x..:..::...x.:...:..::...:.....:..x.......x.xx..:. 31M3D54M 59/85 69.4% 85/94230402 0.0% 3/85 3.5% -21687565 -72542837 +3014 chr4 + 190214555 70092154 70092153 70092207 54 AGAAAAAAGCAGTATATATATATATATATATATATATATATATATATATCATAC chr4 + 94230402 85548425 85548424 85548478 85548425 85548424 85548478 54 AAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGAC .:.......x:x.....:...:.:.:.::...:..........x.......x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -15456271 -78774131 +3144 chr4 + 190214555 70149695 70149694 70149769 75 AGGAAAAAAAGAAAAAAAAATGAAGAAAGGAATGAATATAAGGGGAAAATAGAAAAAAAGGCAAAACTATGGGAA chr4 + 94230402 44043472 44043471 44043546 44043472 44043471 44043546 75 AAAAAGAAAAAAAGAAAAAATGAAGAAGAAAGTCAACATATCAGGAAAAAAAAATCTAAAACACAACTATGCAAA .::..:....:..:.............:::.:.x..:...xx:......x.:..xxx..::..x.......x:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 26106223 NA +3113 chr4 + 190214555 70160408 70160407 70160490 83 TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCCCT--TGCACCAAG chr4 + 94230402 26578266 26578265 26578350 26578266 26578265 26578350 85 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCTTGGTGCAGTAAG .....................:.:.:.:.:.:xx.x...:...x...::.....x:xx.x:x.x..:...:.:.--....x:... 74M2I9M 57/83 68.7% 85/94230402 0.0% 2/83 2.4% 43582142 NA +3070 chr4 + 190214555 70160410 70160409 70160463 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:xx.:...:...x...::..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 43582144 NA +3295 chr4 + 190214555 70160412 70160411 70160465 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:x..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 43582146 NA +3212 chr4 + 190214555 70160414 70160413 70160467 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 43582148 NA +3129 chr4 + 190214555 70160416 70160415 70160469 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 43582150 NA +3510 chr4 + 190214555 70218938 70218937 70219020 83 CGTAGTGGCACACACCTCTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAAGCCGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....::...:--.x....:.........:..:........x.xx.x...x........x..:.:..x:xx:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -5814259 -88416143 +3044 chr4 + 190214555 70253793 70253792 70253856 64 TCTCAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAGACATAAATAG chr4 + 94230402 92119542 92119541 92119605 92119542 92119541 92119605 64 TTTTAAAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAAGCCATGGACGG .:.:...:x:....................x.......::x.xx:.:..:....x...::.::. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -21865749 -72364653 +3872 chr4 + 190214555 70276179 70276178 70276283 105 AAAATACAAAAAGTTAGCCAAGTATGGTG----GTGG-GTGCTTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCAAGGAGGTGGGGGTTGCAG chr4 + 94230402 76033168 76033167 76033277 76033168 76033167 76033277 110 AAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..::x..x..:.xxx...x...:.:----....-.::.x....:.:...........:.........x.xx.x...x..........x..:..x.xx...:..:.. 29M4I4M1I72M 75/105 71.4% 110/94230402 0.0% 5/105 4.8% -5756989 -88473413 +3604 chr4 + 190214555 70283112 70283111 70283223 112 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGAACCTGAGAGGCGGAGGTTGCAG----TGA-GCCA---AGAT-TGTGCC-----ACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......x......:.........:.::........x.xx:x...x..........::::..x:xx:..:..:..----...-....---....-......-----x....x.-.....x....... 74M4I3M1I4M3I4M1I6M5I7M1D13M 86/111 77.5% 125/94230402 0.0% 15/111 13.5% -5750092 -88480310 +3256 chr4 + 190214555 70302487 70302486 70302608 122 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGTGACAGAGGTTGCAGTAAGTTAAGACCATGCCACTGTA--------------CTCCAGCCTGGTGACGGAGGAAGACT chr4 + 94230402 76033205 76033204 76033339 76033205 76033204 76033339 135 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCT .....x....:.:.........::::........x.xx:x...x.:.........:.:x.x:xx:..:..:..-..xx.:.x:...x..x:x...:--------------::.....x.......x.x:..:::.. 73M1D22M14I26M 78/121 64.5% 135/94230402 0.0% 15/121 12.4% -5730718 -88499684 +3589 chr4 + 190214555 70310266 70310265 70310333 68 ACATGGTGGCGCGCACCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAAGAGAATCACTTGAACCCAG chr4 + 94230402 76033196 76033195 76033261 76033196 76033195 76033261 66 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ...::....:..--..x......:...........::...x....x.xx.x...x............. 12M2D54M 53/66 80.3% 66/94230402 0.0% 2/66 3.0% -5722930 -88507472 +3290 chr4 + 190214555 70334309 70334308 70334373 65 AAAATAAAATAAAAATAAATGAAAAAAAAAAAAACAAAAAACAAAAAAAGAAAAAAAAAAAAAAA chr4 + 94230402 78446723 78446722 78446787 78446723 78446722 78446787 65 AGAATAAAATAAAAAGGTTTGAAAAGTCTAAAGGCAAAAAACAAAACCAAAAAAAAAAAAAAGGA .:.............x:xx......:xxx...::............xx.:............::. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -8112414 -86117988 +3566 chr4 + 190214555 70345094 70345093 70345212 119 TACAAAACTCTTGTGTAATAAAGAATTATTCTGAATCTAGTGGTAAAAGATG---------TATAGTAAGGGGTCTCAAAATGGTTCATTAGTTGCCTTTTTCTCTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 68982878 68982877 68982991 68982878 68982877 68982991 114 TACAAAGCCTTTATGTA--------------TGTATCTTCTGGTAAATGTTGATATTTTATCATATTGATTAGATTCAAAATATTTCAAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ......:.::..:....--------------..x....xx.......x.x..---------:...x.:.xx:.x:.......:x....xx....x:x.:.......:...:.:............... 17M14D21M9I67M 77/105 73.3% 114/94230402 0.0% 23/105 21.9% 1362216 NA +3476 chr4 + 190214555 70386143 70386142 70386202 60 TGCACCTGTAATTCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:...........:x.:........x.xx.x...x.:.........:.:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -5647062 -88583340 +3565 chr4 + 190214555 70390961 70390960 70391048 88 AGTTAATACTTAATAAACTTCCATATATATAT---ATATATATAGACACACACACACACACACACATATATATATACACATACATATATAT chr4 + 94230402 91043310 91043309 91043399 91043310 91043309 91043399 90 AGTTGATATGCAATAAATTCCTTTA-ATATTTGAAATGCATGTAGTGACACACACACACACACACATATATATTTAAGCTTAATTAAATAT ....:...:x:......:.:.:x..-....x.---..::..:...xx..........................x..x:.x..xx..x.... 25M1D6M3I56M 66/87 75.9% 90/94230402 0.0% 4/87 4.6% -20652349 -73578053 +3187 chr4 + 190214555 70390983 70390982 70391037 55 ATATATATATATATATATAGACACACACACACACACACACATATATATATACACA chr4 + 94230402 61270781 61270780 61270835 61270781 61270780 61270835 55 ATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ....x.:.......:....x..:...::.....x....x...:....x:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 9120202 NA +3008 chr4 + 190214555 70390990 70390989 70391058 69 TATATATATATAGACACACACACACACACACACATATATATATACACATACATATATATATACACATAC chr4 + 94230402 89823932 89823931 89824000 89823932 89823931 89824000 69 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTAC .......:x...x................x:.:.xx.........::..x.xx.xx.....:.x:x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -19432942 -74797460 +3056 chr4 + 190214555 70390991 70390990 70391041 51 ATATATATATAGACACACACACACACACACACATATATATATACACATACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:.x....x.x....:........:.:......:.x..x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 24250135 NA +3123 chr4 + 190214555 70390994 70390993 70391039 46 TATATATAGACACACACACACACACACACATATA--TATATACACATA chr4 + 94230402 89823932 89823931 89823979 89823932 89823931 89823979 48 TATATATGGATACACACACACACACACACTTATAACTATATATACGTA .......:..:..................x....--......:..:.. 34M2I12M 41/46 89.1% 48/94230402 0.0% 2/46 4.3% -19432938 -74797464 +3344 chr4 + 190214555 70411677 70411676 70411798 122 CATAAACTACCCTATAACAAACGACACTTACATTTTATTGACCAGACCCCATCTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGCCGGGCGCGGTGGGCTCACGCCTGTTAT chr4 + 94230402 24651510 24651509 24651627 24651510 24651509 24651627 118 CACAGATAATACTTAAAAATACAACACTTCTTTTTTTCTCACCAGTTCCTTACTTTCCATACAGCAACAGGGAAAAAAAAAAAAAAAACAGAGACAAGAAACAGCAGG----TGCCTGTTAT ..:.:.:x.:x..xx..x.x..:......x:x....x:.x.....x:..:xx..:.x..x.x.:x..x.:::................x....:.x:.:x:.:.::..----:......... 108M4D10M 75/118 63.6% 118/94230402 0.0% 4/118 3.4% 45760167 NA +3570 chr4 + 190214555 70444922 70444921 70444981 60 TGCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x..................::........x.xx.x...x.:........::.:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -5588283 -88642119 +3199 chr4 + 190214555 70506079 70506078 70506184 106 TTATACATATATACTGAATTATATATATATATACACACACACACACACACACACATATATACA-------------------------TATATTTGCTGGCTACAGTTTGAGCCTTGGAAGGAGTAACATT chr4 + 94230402 46140836 46140835 46140963 46140836 46140835 46140963 128 TTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAAGGTGCTGTTGATTTTTGACAGCAGCAGTTTGA--CTTGGAAGTA-CAACATT ...:..xxx...x:..x:.x.........:.:....x.x....:........:::........-------------------------x..x....x::..x:........--........x.-:...... 63M25I23M2D10M1D7M 77/103 74.8% 128/94230402 0.0% 28/103 27.2% 24365243 NA +3298 chr4 + 190214555 70506092 70506091 70506147 56 CTGAATTATATATATATATACACACACACACACACACACACATATATACATATATT chr4 + 94230402 89823926 89823925 89823981 89823926 89823925 89823981 56 CTGACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATT ....x........:x...:................x:.:.xx......:.::.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -19317834 -74912568 +3040 chr4 + 190214555 70506101 70506100 70506150 50 ATATATATATACACACACACACACACACACACATATATACATATATTTGC chr4 + 94230402 46140856 46140855 46140905 46140856 46140855 46140905 50 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTAC .........:......x.x....:........:.:....:.:.x.:..:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 24365245 NA +3292 chr4 + 190214555 70514829 70514828 70514909 81 TTCCAAAAGCATCTCAGAGAAAGAAAAGTCTAACTCCAAATGAGAGGAACAAAAAGAAAGGCTTCATG---AAGGTGGTAGCAT chr4 + 94230402 77707923 77707922 77708006 77707923 77707922 77708006 84 TCCTGAAAGCTTCTAATACTTAAGAAAGACTAACTAGAAGTCACAGGAACAAAAAAGAAGGCTTCATGTCAAAGGCAGTTGCAT .:.::.....x...x.x.xxx.::....x......xx..:.x.x...........::...........---....::..x.... 68M3I13M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% -7193094 -87037308 +3096 chr4 + 190214555 70516287 70516286 70516355 69 AAAAAAAAAAAAAAAATATATATATATATATATATATACGTATATATATATAT-ACGTATATATATACAT chr4 + 94230402 85548421 85548420 85548490 85548421 85548420 85548490 70 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ............:.:x.....:...:.:.:.::...:.::.......x.....-.x::..:x....x... 53M1I16M 50/69 72.5% 70/94230402 0.0% 1/69 1.4% -15032134 -79198268 +3148 chr4 + 190214555 70516362 70516361 70516425 64 GTATATATATACATGTATATATATACGTATATATATATATACGTATATATATATATATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..........:.....:.x....:.x.:..x:.:..:...::....x.:.:.x.......x.:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -6193229 -88037173 +3177 chr4 + 190214555 70521249 70521248 70521322 74 GTGCACCGGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATCATTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......xx...:.:.........::::........x.xx.x:..x..:.......::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -5511955 -88718447 +3106 chr4 + 190214555 70548661 70548660 70548708 48 AGGAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTTT chr4 + 94230402 27444613 27444612 27444660 27444613 27444612 27444660 48 AGAAGGTTGTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT ..:..x..xx...x....x..x.......................... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 43104048 NA +3089 chr4 + 190214555 70548666 70548665 70548712 47 TTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTCCA chr4 + 94230402 74136542 74136541 74136588 74136542 74136541 74136588 47 TTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCA ..........:.........xxx..x..............x...:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -3587876 -90642526 +3161 chr4 + 190214555 70577961 70577960 70578032 72 TTATTTATTCATTTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT chr4 + 94230402 85834528 85834527 85834599 85834528 85834527 85834599 72 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ..x...........:.x.x.................:.xx:...:x.::.:::.:...:x:.:::...x... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -15256567 -78973835 +3589 chr4 + 190214555 70580786 70580785 70580853 68 ATATGCAATGGTGCACACCTATAGTCCCAGCTATTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCC chr4 + 94230402 76033194 76033193 76033259 76033194 76033193 76033259 66 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC ...::..:........:--.:....:.......:...::........x.x..x...x::......... 17M2D49M 51/66 77.3% 66/94230402 0.0% 2/66 3.0% -5452408 -88777994 +4109 chr4 + 190214555 70583333 70583332 70583476 144 TTACATATATGTGTATATATGTATATACATATATATGTGTATATATGTATATACATATATATGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATACATATATATATCCAAATATCAGATTTTTA chr4 + 94230402 89812948 89812947 89813072 89812948 89812947 89813072 125 TTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTG------------------TATATATGTCTAAATCTCAAGTTTTTA ...:..:.xx....x.:.:-.:.....x...x............x.:x..::x:xx...:.....:.x.:x:x::..:..:...x:x............------------------.......:..:....x...::...... 19M1D79M18D27M 87/125 69.6% 125/94230402 0.0% 19/125 15.2% -19229615 -75000787 +3218 chr4 + 190214555 70583355 70583354 70583429 75 ATATACATATATATGTGTATATATGTATATACATATATATGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:......x:.::..:.x.:.::.::.....x.x......:...x.........:.:..::..:::..:x... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 47983157 NA +3036 chr4 + 190214555 70583370 70583369 70583435 66 TGTATATATGTATATACATATATATGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..::...:xx.:......:x.:x.:x.:x..............:.........::..:::.:.... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 43257878 NA +3040 chr4 + 190214555 70583372 70583371 70583417 46 TATATATGTATATACATATATATGTGTATATGTGTGTGTGTGTGTG chr4 + 94230402 6857611 6857610 6857656 6857611 6857610 6857656 46 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ......:...:....:....x......:.:.x...........x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 63725761 NA +3102 chr4 + 190214555 70583393 70583392 70583496 104 ATGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATACATATATATATCCAAATATCAGATTTTTACATTATGGAACCAAAAAAAT chr4 + 94230402 27325491 27325490 27325584 27325491 27325490 27325584 94 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCAG----------TGCGAAACCAGCAAGAT ...:....:xx...:.::::x..x::x.:x:.:.......:...:.......:...:..:......xx...:.x...----------.::.:.....:x..:.. 77M10D17M 61/94 64.9% 94/94230402 0.0% 10/94 10.6% 43257902 NA +3043 chr4 + 190214555 70583410 70583409 70583465 56 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATACATATATATATCCAAATA chr4 + 94230402 65759992 65759991 65760047 65759992 65759991 65760047 56 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAATA ....x..:...:........::..::...x.............:..:xx.:x.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 4823418 NA +3111 chr4 + 190214555 70583410 70583409 70583461 52 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATACATATATATATCCA chr4 + 94230402 85834541 85834540 85834592 85834541 85834540 85834592 52 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA .....x...................xx:...:x.:........:..x..x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -15251131 -78979271 +5507 chr4 + 190214555 70588677 70588676 70588914 238 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAATGTGTATATATATAAAACATATGTATATATACACACATATATACATATAGAAAACATACTATATATACACATATATAAAA---TATATACACATACATATATACATATATAACATATATGTATATATGTTATGTATGTATGTATATGTTATATATGTATATATGTTATATATGTATGTATATATACACATATA chr4 + 94230402 4618357 4618356 4618564 4618357 4618356 4618564 208 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT-TATATGT---------TGTACTAATA-------------ATACGGAGATAGATAAGGATTTATCTATGC-TTCGTAT-----TCTATtatatatatatatatgtgttagat---tacatatacaatacatatatacatata-tatatatgtatgtatataAAAGAATGTA .::.x.......::..............x:....::......x.x..xxxx.....x.....xx.:....-.....:.---------.:...xx...-------------...::x.x...x....::---...x..::.-.x.:...-----.x...x.:......:.....:.....x:.---..::....::x..:....:..:....:-..................x.x:x..:.. 70M1D7M9D10M13D18M3I9M1D7M5D29M3D27M1D28M 149/205 72.7% 208/94230402 0.0% 36/205 17.6% 65970320 NA +5707 chr4 + 190214555 70588678 70588677 70588847 170 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAATGTGTATATA-TATAAAACATATGT------------------ATATATACACACATATATACATATAGAAAACATACTATATATACACATATA---TAAAATATATACAC-ATACATATATACATATATA-ACATATATGTATATA chr4 + 94230402 4618362 4618361 4618554 4618362 4618361 4618554 193 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTC-TATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatata .......::..............x:..x.x:......x.x......:.:.:x.....-....x.x:......------------------...x...x:x.:x...x..:::x.x.x.xx.-..:........:.:....:---..:.x..:...:..-...................-.:..:.......... 57M1I14M18I31M1D19M3I14M1I19M1I15M 128/169 75.7% 193/94230402 0.0% 25/169 14.8% 65970316 NA +5575 chr4 + 190214555 70588680 70588679 70588867 188 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAATGTGTATATATATAAAACA-TATGTATATATACACACATATATACATATAGAAAACATACTATATATAC-ACATATATAAAATATATACACATACATATA------TACATATATAACATATATGTATATATGTTATGTATGTATGTATAT chr4 + 94230402 4618362 4618361 4618553 4618362 4618361 4618553 192 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGT-TGTACTAATA-ATACGGAGATAGATAAGGATTTATCTATGCTTCGTAT-TCTATtatatatatatatatgtgttagattacatatacaatacatatatacatata-tatatatgtatgtatat .......::..............x:..x.::......x.x....xx..:..x......x.x.:.-...:.:.-.:...xx.:.-...::x.x.....x..x:xx:...x...:.-x.:...-.xx.x......:.:...:..:.:------........:..:.:....:..:....:-...:............. 64M1I7M1D10M1D30M1I6M1D23M6I27M1D17M 133/184 72.3% 192/94230402 0.0% 12/184 6.5% 65970318 NA +3360 chr4 + 190214555 70593725 70593724 70593807 83 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -5439472 -88790930 +3064 chr4 + 190214555 70611476 70611475 70611520 45 CTCCATCTCAAAAAAAAAAAAAAAAAAAAATCTGTTTCTCATCTT chr4 + 94230402 73241399 73241398 73241443 73241399 73241398 73241443 45 CCCCCCCCCAAAAAAAAAAAAAAAAAAATCTCTGTTTTTCATCTT .:..x:.:....................xx.......:....... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -2629923 -91600479 +3813 chr4 + 190214555 70622642 70622641 70622785 144 ACATAATAAATTATATAATATATAATATATATTAT-----------ATATTATATAATATATAATATATATTATATGATATATTATATATAATATAATATATAATATATAGTATATATAATATATTACATATAATATATGATTTATATTATATAT chr4 + 94230402 46018761 46018760 46018915 46018761 46018760 46018915 155 ATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATAT .:...:x....:.xxx.x.x.x...x.:..x....-----------...:.::...x:..x:...:xx.xx..x..x:.....x:.....:x.:.:......:...x...xx::...........x.x.x........:::.x:...xx...... 35M11I109M 94/144 65.3% 155/94230402 0.0% 11/144 7.6% 24603881 NA +3105 chr4 + 190214555 70624738 70624737 70624798 61 TTTTCTTTTTCTTTCTTTTTATTTTCTTTTC----TTTTTCCTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 84866864 84866863 84866928 84866864 84866863 84866928 65 TTTCCTTTTGCTTTTTTTTCATATTCTTCTCATTGTTCTTTCTGTGTTTTTTGTTTTGTTTTTAA ...:.....x....:....:..x.....:..----..:..:..x.x......x....x....... 31M4I30M 49/61 80.3% 65/94230402 0.0% 4/61 6.6% -14242126 -79988276 +3022 chr4 + 190214555 70641336 70641335 70641405 70 CAATAGAATTCTTTTTTCTTTCTTTCTTTCTTTTATTTTTTTTTATTTTATTTATTTATTTATTTTTTTT chr4 + 94230402 36195282 36195281 36195351 36195282 36195281 36195351 70 CAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTT ......x...:.:...::.x.:.......:...:x...x...x.x..xx.....:.:....::..:::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 34446054 NA +3405 chr4 + 190214555 70649984 70649983 70650042 59 GCCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x....:.:...........::........x.xx.x...x...........:.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -5383222 -88847180 +3268 chr4 + 190214555 70652667 70652666 70652732 66 GTGGCGCATGCCTGAAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGTTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:...:.--..x.:.:...........::........x.xx.x...x.::..........:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% -5380534 -88849868 +6408 chr4 + 190214555 70656299 70656298 70657311 1013 AAAGAGCTATGCAGTCAGCAATGACTTAAATTAGTCAGGATAGCAGGCATCTGGGGTTAAGGCTGTTTCCACCATTTTGGTCTCACCACCATATACGAGTGGGACCACAGCTGTGTAGCACTTGTTTCTGTCATAAGTGTAGCAGGTCTCTGTAGCACTGTCTTCATCACAGATATTGCTCTGGGTAGCAGTAACTATCTGATTATCCAGCTCCACTTCTGTAGGATCACATTTTTTACAGCTGAAAAGCA-----AATATATGTATTAGACAATCCCCTCAAATGCTGTCTCAAAATGTGACTACACATTTCAATCCAAAATCAATTAGTTCTTGCAGCTCTGACATGACAGCAAGGGATGACTCCTTTCAGACATAAGCAGCTCTACAATACAGAATAGCTTATGGGATTTTCCAATCTTTAATATATATTAGTTGAAAGTAAGCAATATAATTAATGATATGATAATATGATTGTTTTATCTACACCATACAGCAATTTCTACTGTGTTAGGCTTATTCCCAACTGTATATCTGTCTAAACAAGTTATTTATAGTGACAAGAAAGGGAGAATTTTTAAAAAAATTGATGTTGGAGTCTGTCATTTCCAAAGAAACACCTGCCTTTTTATAAGATCAAATCCACTTATTGAACTATTAAGAGAAATTGGCCTTTCTATGAATGCCAATGATTTTTT--CTTTAGAAAAAATGTATAGCTAAATTTTATCTGTGACAAAGTTTTATGAA-----------TTTATGATACCTAATAATTAACATAGGAATTAATGTATTCAAAAGTTCAGATTATGTTTGTAAATGTTTATACTCCAACATATTTTTAAAAACATTCTTACTAACAAGGTTAAAATTAAAAGCTATTAACTTCCACATCTATATTACTATGGAAAAAAATATATCTTACAGGTCAGACAAATGGTACACAAATCTGGTTCTCAATGGTGAGGTGGGATCAGAGATATTCTCCCTGTTGTTCAGAGGAACACTAAAAGAAAAGAAAGAAAA chr4 + 94230402 51508455 51508454 51509280 51508455 51508454 51509280 826 AACGAGGTGTTAGGTTAGCAGTGGATTGAGCTATTCGGCATAGCAGGATGTTGGTGTCAGTGCTGCTTGAATATGCTTTGTTTCCCCGTGGTAGACAAAAGGGAAGGTTGTGGTGTAGCATTTGTCCCTGTTGTAGGTGTAGCAGGTTTCTGG---------CTCGTTGCAGGAGTTGCTCTGCTGGGCCTGGTATGTCTCACCCCCCAGCTCAATTTCTACGGGATCACATTTTTTGCAGCTGGAAGAGATAAGGAATAGAAGTATTA---------CTCAGA-GCTGT----GATTGAGACCCCTCTGACAAAACTGTAGTC------TTCCT----CTCTAATCTGACAGCTGTGGCTAGCTGGGTACCAA---------------------------------GGCCTTTCCAAGCC-----ATATGTTC--------TACGCAGCA----------------------------------ACGCCCAGCAGGTGCTCTCAGTGTGTCA-----------AACTGCAATTCA--CCAAACTGGCCCCTAAAAGGGAGGGTTAAAGATGAACTGTGCAATTTCTTGATATTTAAGACATTCA-----AGAAGAAAATAGGTCAGCATGAAACTTTGCCTGCAAATGTAACACTTTTAATGTAAATTAATC-----ATAGATGT-AACAATTCCTTGGCTTGCAATGGAATACACAA----------------ACAAGGCTCTAAAAGGAAAACTTTCCTCTGTGATGCTCC------------------------TTCACATTATCAG-CTGTCCTTCAAGATGTTTGTGAGCCACTGTGTGC-----AGCACTGCAG--GATAGGGTAGGTGTTAGGAA--ATTAATTTA---------------GTAAAGAGAAATA---CTTACAGTTCAGTCATGCGGTAGACAAAAGTGGTTCTGAGTGGGGATGTGGGATCAGAGATATTCTCCCGGCTCTTGAGTGGGACACTGGAATGGAGGAAAGAGAA ..x...x.:.xx:..:....:..:x..:.::..x..:.x........xxx:...x..:.:x....:..xx.:xxx:..x..:..x..::x:..x..:.:x....xx::x.:x........:....::....::..:...........:....x---------:..:.::...:x:........xxx:..xxx:xx.:...x.::x:.......x.:....:::..............:......:..::x.-----....x.x......---------....:.-.....----:.x..x...:x.x.xxx:x..x.::x.:..------...:.----....:.:x.......x:x..x.::..xxx.x.x:.---------------------------------..x:.......x.:-----....:..x--------..x...::.----------------------------------..:..xx:...xx::.:::.x.....:.-----------.....:.xx..x--.:....x:.::x:.x.x..x..x::xx..:.:x...:.x.xx..xxxx.....:..x:..x.xx...-----.:.::..x.:xx.:.xx:x.:x..xx.::xx.x..xx.:.x:x...x....x:x.....:::.-----..::...:-..::...::..--...xx:.x::...::.:.:----------------....:.:.:..x:.:-----------.:.:....:.::x------------------------....x.xxx....-:.:.x:..xx.:......:.:xx...x::.:.x:-----.:..:.x:x:--:.:.:...x::x:...::.:--.....:..x---------------:.::.:.:.....---.......x....x..x::....x.....xx.......x.:...x..x......................x.:.x..x..x..:.....::..x::.:......:.. 153M9D89M5I13M9D6M1D5M4D30M6D5M4D35M33D14M5D8M8D9M34D28M11D12M2D67M5D63M5D8M1D11M2I19M16D15M11I13M24D13M1D34M5D10M2D20M2D9M15D13M3D106M 491/808 60.8% 826/94230402 0.0% 223/808 27.6% 19147844 NA +3299 chr4 + 190214555 70659415 70659414 70659492 78 AGGAGTGCATATGTAGTTCCAGCTACTAGGGAGACTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.....::................x.::..:.....x.xx:x...x::........::.:..x:xx:..:..:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -5373785 -88856617 +4922 chr4 + 190214555 70662082 70662081 70662210 129 TGCCACATACATAATTCGGATGTTTCTCTCCACAATGTCCTCATTAGGATCTTCGGAAGAACGGATGATCCTGGAAGTAATCCGGGCACACTTACATTTGTTGTCAACAAGAACAATCCTTTCATCTTC chr4 + 94230402 51510157 51510156 51510285 51510157 51510156 51510285 129 TGCCACTTACATGATACGTATGTTTCTCTCCAGGACTTCTTCCTCAGGATTGTCTTTGGAGGGGACGAACTTTGAGGTCACCGTTACGCACTTACACTTGTTATTAACCAGCACACGCTCCTCACCATC ......x.....:..x..x.............x:.:x..:..x.:.....:x..xxx:..:x...:..x.:.x..:..x.:.xxx:.:........:.....:.:...x..x...xx.:::...:.x.. 129M 86/129 66.7% 129/94230402 0.0% 0/129 0.0% 19151925 NA +3109 chr4 + 190214555 70664180 70664179 70664250 71 CTGCACCACTCCACTCCAGCTTGGGCAACAGAGCGAGACTCCATCTCAAAAAATAATAATAATAATAATAA chr4 + 94230402 45966276 45966275 45966346 45966276 45966275 45966346 71 CTGCATCACTCCTGGCCAGTTAGAAAAACAAAGCAACACACCCATGGAAAAAATAATAATAATAATCACAA .....:......xxx....:.x.::x....:...:.x..x..xx:xx...................x.:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 24697904 NA +36024 chr4 + 190214555 70688880 70688879 70690122 1243 AGAGTGGAGACGAGGAGGATG-------GCGAGGAGGAGGAGGAGGAGGTGCTAGCCCTAGATATGGACGATGAGGACG------------------ACGAAGAT---------GGAGGGAATGCGGGGGAGGAGGAGGAGGAGGAGAATGCCGATGATGATGGTGGGAGC---------------------TCCGTGCAAAGTGA--------AGC----TGAGGCCTCTGTGGATCCCAGT---TTGTCGTGGGGTCAGAGGAAAAAACTTTACTATGACACGGACTATGG------TTCCAAGTCCCGAGGCCGGCAGAGTCAACAGGAGGCAGAGGAGGAGGAAAGAGAGGAGGAGGAGGAGGCACAGATCATTCAGCGGCGCCTAGCCCAAGCGCTGCAAGAGGATGATTTTGGTGTCGCCTGGGTTGAGGCCT---TTGCAAAACCAGTG----CCTCAGGTAG-ATGAGGCTGAGACACGGGTCGTGAAGGATTTGGCTAAAGTTTCAGTGAAAGAGAAGCTGAAAATGTTGCGAAAGGAATCACCAGAACTCTTGGAGCTGATAGAAGACCTGAAAGTCAAGTTGACAGAGGTTAAGGATGAGCTGGAGCCATTGTTAGAGTTGGTGGAACAAGGGATCATTCCACCCGGAAAAGGAAGCCAATACTTGAGGACCAAGTACAACCTCTACTTGAATTATTGCTCGAACATCAGTTTTTATTTGATCCTGAAAGCTAGGAGAGTCCCAGCACATGGACATCCTGTCATAGAAAGGCTTGTTACCTACCGAAATTTGATCAACAAGCTGTCCGTTGTGGATCAGAAGCTGTCCTCAGAAATTCGTCATCTGTTGACACTTAAGGATGATGCTGTAAAGAAAGAACTGATTCCAAAAGCAAAA-----------------TCCACCAAGC-----------CCAAACCAAAGTCTGTTTCAAAGACTTCTGCTGCTGCCTG------TGCTGTTACAGATCTTTCTGATGATTCTGATTTTGATGAAAAAGCAAAACTGAAGTACTATAAAGAAATAGAAGACAGGCAAAAGCTAAAGAGAAAGA------AAGAAGAAAATAGCACTGAAGAACAGGCTCTTGAA---GATCAAAATGCAAAGAGAGCTATTACCTATCAAATTGCTAAAAATAGGGGACTTACTCCTAGGAGAAAGAAGATTGATCGCAATCCCAGAGTGAAACACAGAGAGAAGTTCAGAAGAGCCAAAATTAGAAGAAGAGGCCAGGTTCGTGAAGTTCGTAAAGAAGAGCAACGTTATAGTGGTGAATTATCTGGCATTCGTGCAGGAGTTAAAAAGAGCATTAAGCTTAAATGAAGTTT chr4 + 94230402 51519581 51519580 51520935 51519581 51519580 51520935 1355 aggatgaagaggaggaggaggtggaggagggaggaggaagaggaagaggaAGGAGAACCTGGTGAGGAAGTAGAGGAAGCAAGGGAAAGTAGGTTTTACGAGGACCGCAGTGCAgaggaggatgggggagatgaggaggaggaagagaatgaagatgaggatgaggagaatgaagatgaggatgaggaCCTGTCCATGGAGAGTGATTTGGAAGAGCGTGGTAAGGACACTGATCTCCCCCATGAGCTGTCCTGGGGCCGACGCAAACAGCTCTACTACGATACGGACTATGGGGGCGATGCCCAGGCTAAGGGCAAACGTAGCCAGCAAGACGTCGATGCTGAGGAGGAGGAAGAGGAGCAGGAGGCTAAAGTGATCCAGAGGCGACTGGTAGAGGACTTGGGGGAGGATGATTATGGGCTGGATGTGATCCAGGGCTACCTGGCGGAGCAACAGAAAACCCACGATAGCAAGGGGCAGAAA-----ATTGCCAAGGACTTGCAGGCCCTTTCCAAGAAGGAGCAGCTGAAGCTATTGAAGCAGGAATCTCCTGAGCTCCTGCAGCTGATTGAAGACTTTGAAGTCAAACTGATGGAGCTCAAGGATGAGCTGCACCCACTGCTGCAAATGGTCAAAAATGGCACTATCCCCCAGGGGAAAGGCAGTCGCTATTTGCAGACCAAGTATCAGCTCTACTTGAATTACTGTGCCAATATCAGTTTCTATTTAGTTTTAAAGTCAAAAAGGATGCCAGTTCATAGTCACCCCATCATTGAACGGTTGGTTGCTTACAGAAATATCATCAATGACCTAGCTGTGATAGACCAAAAGTTATCCTCACAGGTTCGCCTGCTTCTGAAGAACTATTACGATAAGAAGGAGGAAAAACTG----CGAGAGCGGAAGAAGTTTCCGGTGCTTCTCCAACCAACTGCAAAGAAAACCAAACGAAAACGTG------AACCTGCTCTTGCTAACGGCCGGCTTGCTGCTGAGGAACTGGCAGATGAATCTGACCTGGATGGAGAGGCTGCGCTAAAATACTATAAGATGATGGAAGAGAAGTTGAAACTCAAGAGGAAGAGAACTGAAGAACAGGAAACGCCTGAAGAACCAGTGACAGAAGAGGATCCAAACCAAAAGAGAGGTGTGACTTACCAGATGATCAAGAACAAAGGCCTCACCCCCAGGAGGAAGAAGATTGACCGCAACCCCAGGGTCAAGCATCGGGAGAAGTTCAGGAGAGCCAAGATTCGCCGGAAGGGCCAGGTCCGAGAAGTTCGGAGGGAGATACACAGATACAGCGGGGAGCTCTCTGGCATTCGTGCCGGAGTTAAGAAGAGCAGAAAACTTCAGTGAAACTT ..::..:...x........x.-------.x........:.....:....x:xx..xx.:x.:.:x...x.xx.....x.------------------....:..:---------.::.:.:...x...:..x...........:.......xx.....x....:x.:..::---------------------...:..x.:.....--------...----.:...x.x...xxxx:...x:.---:....x.....:.::x.x...x.:..:.....:..:...........------.x..x..x.:x::...x::.:x..:..:..:..x.:x..x.xx.....::::..:......x.......xx.::.x..:...x....x..:.:xx.:.xx:..x::..........x...xx.x.x:xx.:.:x...x..---.x..::.:.x.xx.----..:xx.:...-.x.:...x..:.-----:.:.:x.....:...xxx:xxx....x:x...:...x.......:x.:...x::x.......x..x..:...:..x.......x......:.x:.......::...::...x.:............x.x...:..:.:x.:x....x:..x.x..x.::..:..x.xx..:.....x..:.:x..:...x:.........:x.x..............:..:x.x..:........:.....::.::.:..:x.x.::..::.x....:x...:.x..:..::....x...x..:.x...:.:...x.....x.x.....::.x..:x.:..x:.:..:..:...:.:......x.::....:.xx..x:...x:xx:x.xx.:...:xx:x::..:..:.....----.:.:...::..-----------------....x.x.:.-----------......x...::x..------.:x..x..x:....:x.x.------.....:.:x:..x..xx.x.....x.....::.x....:.:.:..x:x:..:..:........::x:..:.....x.:.:x:..:..x.....:....------.....x.::.x.xxx.........x:.:xx:x...---....x...:xx........x.:.x..:..:..:..x:::..:..:.::..x..:..:..:.....:...........:.....:.....:..x..:..:x.:...........:........:...x.xx.:.::........:..x........x.::..::x:..xx.x..:..:..x..::.x..............x........:.......xx..:...x.:....::.. 21M7I51M18I8M9I57M21I14M8I3M4I22M3I47M6I140M3I14M4I10M1I12M5D405M4D11M17I10M11I15M6D19M6I98M6I35M3I236M 813/1228 66.2% 1355/94230402 0.0% 142/1228 11.6% 19169299 NA +3143 chr4 + 190214555 70692329 70692328 70692396 68 GCTCCTGGCCATTTTTTGGTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATGGAGCCTTTCTC chr4 + 94230402 25418131 25418130 25418198 25418131 25418130 25418198 68 GCCTCTAGGGTTTTTGGGGTGTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTAGCATTTTGGTTTTCCC ..::..:.xxx....xx............................x.....::x..xxx.x:....:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 45274198 NA +3281 chr4 + 190214555 70692340 70692339 70692404 65 TTTTTTGGTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATG---GAGCCTTTCTCTGTCACCC chr4 + 94230402 48643527 48643526 48643594 48643527 48643526 48643594 68 TTTTTGGGTGTTTTTTTTGTTTGTTTGTTTGTTTTTTGCTGTGATTTGCTAACTCTTCTGTTTCATCC .....x............................x..x:..x...x---x.:.::....x.x...:.. 46M3I19M 52/65 80.0% 68/94230402 0.0% 3/65 4.6% 22048813 NA +3013 chr4 + 190214555 70692345 70692344 70692387 43 TGGTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATGGA chr4 + 94230402 50802153 50802152 50802195 50802153 50802152 50802195 43 TGTTGTTTTTGTTGTTTATTTGTTTGTTTGTTTCTGAGGAGGA ..x.......x......:...............:....:x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 19890192 NA +3135 chr4 + 190214555 70697205 70697204 70697287 83 CATGGTGGTGTGCGCCTGTGGTCCCAGCTAGTGGTGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::..--...:..:.......x.x.x:........x:xx.x.:.x.......:..::.:..x.:x:.....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -5335992 -88894410 +3794 chr4 + 190214555 70699499 70699498 70699605 107 ATATGTATATATATGTGGGTGTGTGTGTGTGTATATATAT--------ATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x....:.....x..x.x....x.:....x.....--------.....:.:x....:x.:..:..:...::x::..:x.x.........:.:...:x....::..::.:. 40M8I67M 72/107 67.3% 115/94230402 0.0% 8/107 7.5% 49590312 NA +3031 chr4 + 190214555 70699528 70699527 70699592 65 TGTATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..::...:xx.:....:x::..x.:x.:x..:...........:..........::..:...... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 43374036 NA +3297 chr4 + 190214555 70699543 70699542 70699619 77 ATTTTTGTATGTG-TATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 29797126 29797125 29797203 29797126 29797125 29797203 78 ATTTCTGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT ....:..:.::..-:..:::.::..:..:......:...:..x.........:.:.:.x.x.x......x:.....:. 13M1I64M 53/77 68.8% 78/94230402 0.0% 1/77 1.3% 40902417 NA +3197 chr4 + 190214555 70699544 70699543 70699610 67 TTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTT chr4 + 94230402 85834531 85834530 85834597 85834531 85834530 85834597 67 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x.x:..x...:.x.................:.xx..:..x::...:....:..x...:..x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -15134987 -79095415 +3191 chr4 + 190214555 70699545 70699544 70699606 62 TTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 + 94230402 85834528 85834527 85834589 85834528 85834527 85834589 62 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAAT ....x...x::.x.....x...................xx..:..x::...:....:..x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -15134983 -79095419 +3022 chr4 + 190214555 70699546 70699545 70699606 61 TTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 + 94230402 85834539 85834538 85834599 85834539 85834538 85834599 61 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....:.x...:.............:.xx:...:x::...:....:..x...:..:.x... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -15134993 -79095409 +3224 chr4 + 190214555 70699546 70699545 70699608 63 TTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTT chr4 + 94230402 85834535 85834534 85834597 85834535 85834534 85834597 63 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ..::.x.....x.................:.xx:.:..x::...:....:..x...:..:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -15134989 -79095413 +3297 chr4 + 190214555 70699559 70699558 70699626 68 GTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250994 33250993 33251061 33250994 33250993 33251061 68 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..x.x.x.x...................:.:........x.xx.x.xx...x.....x..x....... 68M 53/68 77.9% 68/94230402 0.0% 0/68 0.0% 37448565 NA +3289 chr4 + 190214555 70699561 70699560 70699627 67 GTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250994 33250993 33251060 33250994 33250993 33251060 67 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTT ..x.x.x.x...........:.......:.:........x.xx.x..x...x.....x..x...... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 37448567 NA +3001 chr4 + 190214555 70699562 70699561 70699622 61 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::..........................x:x.x.x:x.x.....:.x....:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 47176798 NA +3025 chr4 + 190214555 70699563 70699562 70699627 65 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9942685 9942684 9942749 9942685 9942684 9942749 65 GTAAGTGTGTATGCATGTATAGATATATTTGTATACATGCACATACTGTATTTTTCCTATTTTTT ..:x......:..::......x......x.:....:..::.:..x:.x.x.....::.x...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 60756878 NA +3096 chr4 + 190214555 70699566 70699565 70699628 63 TGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 23522764 23522763 23522826 23522764 23522763 23522826 63 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCA ..x.x..::......:.:.................x:x.x..::.x.....:.x....:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 47176802 NA +3017 chr4 + 190214555 70699585 70699584 70699623 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 45906959 NA +3745 chr4 + 190214555 70715984 70715983 70716055 72 TACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGCAGGTGGAGGTTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:...x......:...........::........x.xx.x...x...........:.x..x.xx:..:..:. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -5317221 -88913181 +3145 chr4 + 190214555 70717582 70717581 70717647 66 TGTGTGTGTGTGTGTTTGTGTGTGTGTGTTTTAAATGTCTTTTTATTTTCTCTGAATAAAATTTAA chr4 + 94230402 28875079 28875078 28875144 28875079 28875078 28875144 66 TGTTTGAGTTTGTGTTTGTGTCTGAATATTGTAAATATCTTTATACTCTCTCTAATAAAGCTTTAA ...x..x..x...........x..x:.:..x.....:.....x..:.:.....:.xx..:x..... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 41842503 NA +30859 chr4 + 190214555 70721804 70721803 70722818 1015 CTGATCACAGTTTGACTAGCACAGTCTGGAAGTGGGTTGTACAGGATGAGAGAGAGAAGCCTAATTGCTCTCCCAGCATCAGCAGCATCTATAAAGCATCCTGGGAATTGCTTGCCCTACGTTCAGAGCAGCTGGTCACATGAGCCTGAATTTTCAGTTCAGTTCATTAGTCAGCCATTTTGGTCAACACCCTGCTTACTGCGCACGGCCAATCCTATGAGAACTCAGCATCCCAGCTCATCTGAGCAGA----TCCTGGAAG--TGATTTCTGCAGCTCAGGATTTTTTTTTTAAGCTACATT-----------------------GAAAATATAGG--------------------------TTTATTTTTTGTTCAGGTTTTTCTTTTATATTTTTTTTCTGCACAAAGGAGGAGGATTTTTCACTTACTCATATCGAGGCCAGATTTTTAAAGCCAGCTAAGGCAGCATCAGCTGTGCGGGATTTAAAGCCTATAGCTCAGCTGAAAAAAAAGGTGGGGGGCAGGGAAGGGAAGATAAAAGGAGAGGAAGCTGGGAGAAGACAAGCATCATCTT-ATTTTGCTATGTGGTAGGAACTGTCTATAAGATAGTGTAGAATTGTTTATCTTGAGCAGTTTGTTCTTAACCTATAA------GGTATTTTTCCTTTTTTTTTTTTTTAAACCTCCCCCACCCTTTTCCTGAAAGCTTTGTTTCAGAGCTTTGTATTGGGTTTTTTTGGTGAGGAGGTTGTATTTATTTTTTTGGTGTGTGTGTGTGAGTGTGTGTGTGTCTGTGTGTGTGTTGTGGTCCCAGCTGAGTCATCATGTCTGCTCTGACGCCTCCGACCGATATGCCAACCCCCACCACTGACAAGATCACACAGGCTGCCATGGAGACCATCTACCTTTGCAAATTCCGAGTGTCCATGGATGGAGAATGGCTCTGCCTGCGAGAGCTGGATGACATCTCACTTACACCTGACCCAGAGCCTACCCATGAAGGTATGGTCAGATCCTGTCCGCTAGTATTTCACCAGCATCCTCATTGTTATGG-----GGGAGGGCTGGGAGG chr4 + 94230402 51530992 51530991 51531919 51530992 51530991 51531919 928 CTGCTCGGAAATGGCCCAGCGGAGCCCGATGAGGAGCTGCTGGGGATGAT-----GAGACCTAATTGCCATCCCTGCATCAGCAGCGCCTACGAAGCATCCTGGGAATTGCTCGCCCCACGCTCGGAGCAGCTGGTCACATGAGCCTGAATTTTCAGTTCAGTTCATTAGTCAGCCATTTTGGTCAACACCCTGCTTACTGCGCACAACCAATCCTATCAGCACTCGCTGCCCTGCCTGAGCTGGCAAGAAAGGCACCAGCAGCTTCATTTCAGCAAACCTGGATATCTTTTT----CTACGTCCTTCCTTTGTTTTTGCTTGGGCGGTCATCAGAGGAAGCCCttctttttcttcctcctgcattttttttttcttttaatatattttttatcttctttttttt---------------ttttCCACCT-TTGATGCAGAAGCCAGGTTTC------------------CTGTGGTTGCTTAGGATCAATAGCCTTTAGCGTATCCGAAGACAACGACAGCTGACGGGGAGGAG---------GGAGGAACAGACGAGCGTGAAGGAGCGGCGTTTTTACCTTGCTTTATA-TATGAAAAGGCCAAAGCAGTCTGTG-------TGATCCTGAGCA-----TATCTGACCTATAATAGCAAGGTATTTCTTGTTTT------------------------CTTCTTCCAAAAGCTCTTCTTCTTAGTTCT----------------------------------TTTTTTCCCTGT-------------------------------TGTTGTCGTACCAGCTGAGTCATCATGTCTGCTCTGACGCCTCAAAGCGACATGCCAACCCCCACCACCGACAAGATCACTCAGGCTGCCATGGAGACCATCTATCTTTGCAAATTCCGAGTGTCCATGGATGGAGAGTGGCTCTGCTTGCGCGAGCTGGATGACATCTCGCTGACCCCCGACCCAGAGCCTACCCATGAAGGTACGGTCCGGTTCGCTGCCTCGGGATCCCTGCAGCCGCCGCATTGTTACTGCTGCTGCAAGAGTTGGGAGG ...x..:x.:x.x.x.:...:x..:.:.:x::x.:.:..:xx:......x-----..::.........:x....x...........::...::...................:....:...:..:.................................................................................::..........x..x....:x:::..::x..x.x...:xx...----:x.::.x..--.x.....x...:x:.x....x.:.....----....:.:-----------------------.xx.x:.x...--------------------------...x......x..:x::.x.x.:......x..:.....:.x---------------....:...:.-:.x..::x..:.....:...:------------------.xx::.:..:x::....:x.x.....x....x:.x.:...:.x..x.:::.xx.:.:....:.:.---------....:::x..x:.:.x.x::.x:...:x.:.:..-.::.....x.:.:-..x...xx.x.:.x.:x.xxx...:-------.x...:......-----.x::.:........------.......:.:x....------------------------...:.:.::......:.x:...xx..:.:.----------------------------------......:xx...-------------------------------......x..x.................................x:.x...:.................:...........x.......................:................................:.........:....x.................:..x..x..:.........................:....x.:.:.xx.x.x:::.x..::.xx....xx..x........:x.-----.x:..:.:....... 50M5D195M4I9M2I28M4D7M23I11M26I41M15D10M1D21M18D65M9D34M1I13M1D25M7D12M5D14M6I15M24D30M34D12M31D254M5I15M 637/861 74.0% 928/94230402 0.0% 221/861 25.7% 19190812 NA +12603 chr4 + 190214555 70741516 70741515 70741716 201 GAACCTCCCTTTCAGTTATCCCTTT-GGAAATCTTGTTTTTAATAGCACTTTTCTTTCTG-----GGCTTGCATGACATTTTATCTTTCTTTTCCTTTCTTTTTGCCGTTTGCAAAGACTCTTGGGAGGATTTGACAGATTTGGTGGAGCAAATGCGCGATGATACAGAAGGTGCGTGCCACACCAACATCTTTCAGCTTTTTCTCC chr4 + 94230402 51543829 51543828 51544029 51543829 51543828 51544029 201 GAATCTCCCTTTCAGTTATCCTTCCCTTATACCTTGATTTTGA----ATCTTTCCTTTAGATCATGGCTTGCATGACATTTT--CTTTCTTTTCCTTTCTTTTTGCTGTTTGCAAAGACTCTTGGGAGGATTTGACAGATGTGGTGGAGCAATTGCGTGATGATACTGAAGGTGCGTGCCACACCAACATCTTTCAGCTATTATTTC ...:.................:.::-xx.x.:....x....:.----.::....:..:x.-----.................--......................:.................................x...........x....:........x................................x..x:.:. 25M1I17M4D13M5I17M2D123M 171/195 87.7% 201/94230402 0.0% 12/195 6.2% 19197687 NA +14335 chr4 + 190214555 70762476 70762475 70762698 223 ATTTCTAGTAACCAGCCTTCATCTTCTTCCCCTTTGGCTGCAGATCCTAATTATCTCATGGCTAATGAACGCATGAACCTCATGAACATGGCCAAGCTGAGTATCAAGGGCTTGATTGAATCAGCTCTGAACCTGGGGAGGACTCTTGACTCTGACTATGCACCTCTCCAGCAATTCTTTGTGGTGATGGAGCACTGTCTGAAACATGGCTTGAAAGGTAGGC chr4 + 94230402 51552648 51552647 51552868 51552648 51552647 51552868 221 ACTTCTGTTACTCACCTGTGTTTTTCTTCTGTTTT--CTATAGATCCTAATTATCTCATGGCTAATGAACGCATGAACCTGATGAACATGGCAAAACTGAGTATCAAAGGGTTGATCGAATCAGCGCTTAATCTGGGCAGGACACTGGACTCTGACTATGCACCTCTTCAGCAGTTCTTCGTTGTGATGGAGCATTGCCTTAAACATGGCTTGAAAGGTAAAC .:....:x..x:..x.:x.xx.:......:x:...--..::.......................................x...........x..:...........:..x.....:........x..x..:.....x.....x..x....................:.....:.....:..x...........:..:..x...................::. 35M2D186M 184/221 83.3% 221/94230402 0.0% 2/221 0.9% 19209828 NA +3062 chr4 + 190214555 70763137 70763136 70763320 184 TCAATATTCTTTTCTTGTTGTTTTTTGTTTGATTGTTTTTTTTAAATCTGTATGCCTATGCTTACCAACTTCCCAATATTCCATAGCCTATTTCTGGATTACATATTCTTTTCTATTGAGCTGTTTTCTTCATTAATACCACACAATTTTAGGCACTAAATTGTTAAAATGTTTTATTATATTA chr4 + 94230402 60289725 60289724 60289878 60289725 60289724 60289878 154 TCAGTATTGAATTGTTGTTGTTTGTTGTTTGTTTGTTTTTTTTAAATGTG---------------CAACT-----GGGTTACATAA--TACTATTGTGGTATAACTTTGTACCTATAAAGCCCACTTCTTGATTAAAAGCTCA-------ATGCACT-GTTCATTATAGTATTTTAGTGGATTA ...:....xxx..x.........x.......x...............x..---------------.....-----:x:..x....:--..:.x:..x:x..:.xx..:x.x:....x:...:xx:.....x.....x.x.x..-------.x.....-:x.::...x.:.:.....x.:x.... 50M15D5M5D11M2D55M7D7M1D26M 107/154 69.5% 154/94230402 0.0% 30/154 19.5% 10473412 NA +9285 chr4 + 190214555 70763538 70763537 70763675 138 TTTTGTTGCCTTAGCTAAAAAAACTTTTCTCGGACAAAATAAATCCTTCTGGGGGCCTCTAGAACTGGTAGAAAAGCTTGTTCCAGAAGCCGCAGAGATAACAGCAAGTGTTAAAGATCTTCCAGGACTTAAGTAAGT chr4 + 94230402 51554098 51554097 51554235 51554098 51554097 51554235 138 TTTTCTTTTTCTAGCCAAAAAGACTTTTCTTGGGCAAAATAAGTCATTTTGGGGACCTTTAGAACTAGTAGAAAAACTTGTTCCTGAAGCTGCAGAGATTACGGCAAGCGTTAAGGATCTCCCAGGCCTGAAGTAAGT ....x..x:::....:.....:........:..:........:..x..:.....:...:.......:........:........x.....:........x..:.....:.....:.....:.....x..x........ 138M 113/138 81.9% 138/94230402 0.0% 0/138 0.0% 19209440 NA +8343 chr4 + 190214555 70764439 70764438 70764601 163 TATGTTTTCAGTTGTTTGATTTCTGTGTTTTTGTAGGACACCAGTAGGTAGAGGAAGAGCCTGGCTTCGTTTGGCATTAATGCAAAAGAAACTTTCAGAATATATGAAAGCTTTGATCAATAAGAAAGAACTTCTCAGGTATGAACACCTTCTTGAACTTTCT chr4 + 94230402 51556098 51556097 51556252 51556098 51556097 51556252 155 TACATGTGTAATTGTGTTGGTTTTG-GCCTTTGTAGGACACCTGTGGGTAGAGGAAGAGCTTGGCTTCGCCTTGCTCTAATGCAGAAGAAACTTTCAGAGTACATGAAAGCCTTGATTAACAGAAAGGATCTTCTCAGGTGAG-------CCTTGAACTCTCT ..::.x.x:.:....x.x:x..:..-.::.............x..:..............:........::.x..x:.......:..............:..:........:.....:..:.::..:..x..........:x.-------:........:... 25M1D117M7D13M 120/155 77.4% 155/94230402 0.0% 8/155 5.2% 19208341 NA +3019 chr4 + 190214555 70765181 70765180 70765236 56 CTGTCTCAAAAAAAAAAAAAAAAAATGTGTATATATATATATATATTTGTAAAATC chr4 + 94230402 23965212 23965211 23965267 23965212 23965211 23965267 56 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTAAAGTC ....x...:.::............:xx.::...........x....x.x....:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 46799969 NA +8919 chr4 + 190214555 70768530 70768529 70768663 134 TCTTACAGTGAATTCTACGAACCCAATGCCCTCATGATGGAAGAAGAAGGAGCCATAATTGCTGGTCTGTTGGTGGGTCTGAATGTCATTGATGCCAATTTCTGTATGAAAGGAGAAGACTTGGACTCTCAGGT chr4 + 94230402 51557172 51557171 51557305 51557172 51557171 51557305 134 TCCTGTAGTGAATTTTACGAGCCTAATGCACTGATGATGGAAGAAGAAGGTGCGATCATTGCTGGCCTCCTCGTTGGTTTGAATGTCATTGATGCAAACTTCTGCATGAAAGGAGAAGACCTGGATTCACAGGT ..:.::........:.....:..:.....x..x.................x..x..x........:..x:.x..x...:................x..:.....:...............:....:..x..... 134M 111/134 82.8% 134/94230402 0.0% 0/134 0.0% 19211358 NA +3010 chr4 + 190214555 70769703 70769702 70769759 57 TCAGTCCTCTCAAATCTTGCTGCTGCTTTATCAACTAAGTTTATGTAATACTCTAGT chr4 + 94230402 51226476 51226475 51226532 51226476 51226475 51226532 57 TCTGTTCTGTGAAATTATGCCACCACTCTGTCAACTAAGTTTACATTATACTCTAGT ..x..:..x.x....:x...::.::..:.:.............::.x.......... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 19543227 NA +5548 chr4 + 190214555 70773451 70773450 70773624 174 GTGTTATGCCTTGTAAAGAATATCTAATTTTATATTAAAACCTGAAAATTCTCTCTGTAGGTTGGAGTTATAGATTTTTCAATGTATCTCAAGGACGGGAACAGCAGTAAAGGTACTGAAGGGTACGTACAAAGAAAATTAGATTTCTTTTCTCCTGATGTAGCATTTTTTTTC chr4 + 94230402 51557531 51557530 51557692 51557531 51557530 51557692 162 GTGTTTAGTCTTATGAAAAGTGTTTAATGT------ACAA--TGCAATTTTTTCTCCTAGGTTGGAGTTATTGATTTCTCAATGTATTTGAAAGATGGAAACAGCACAAAAGGCAGTGAAGGGTAAGCACATGCACAACTGTCCTGCACACCTCTTGATG----ACTTGTTTTC .....xx.:...:.:..:.:.:.:....x.------.x..--..x..x..:.::::x..............x.....:.........:.x..:..:..:.......xx.....:.x.........x.:...x:x.x..:.:xx:.x.x:x:...:.....----.:..x..... 30M6D4M2D118M4D10M 113/162 69.8% 162/94230402 0.0% 12/162 7.4% 19215920 NA +3545 chr4 + 190214555 70774486 70774485 70774557 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x..x.x...x::.........:.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -5258720 -88971682 +3222 chr4 + 190214555 70774611 70774610 70774680 70 CCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAAAATAAACA chr4 + 94230402 49163127 49163126 49163196 49163127 49163126 49163196 70 CCTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAACA ....x.:...:...............:..x...xxx.:.x.:.:.::.......x:.x.....x.x.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 21611484 NA +3076 chr4 + 190214555 70774618 70774617 70774674 57 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAAAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:......x.x......:.:..:...:.....x....:x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 69279618 NA +3089 chr4 + 190214555 70774620 70774619 70774675 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAAAAT chr4 + 94230402 90030076 90030075 90030131 90030076 90030075 90030131 56 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAAT ...x.......xxx:...::..............:.:.:............xx... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -19255456 -74974946 +3162 chr4 + 190214555 70774620 70774619 70774671 52 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:......x........:.:..:...:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 69279620 NA +3217 chr4 + 190214555 70774622 70774621 70774669 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 69279622 NA +5764 chr4 + 190214555 70775154 70775153 70775244 91 TCCCCTTCCCCCAGAGACGGTCAGATTACTGCAATTCTGGACCAGAAGAACTATGTAGAAGAACTGAACAGACATTTGAAGTAAATAATGA chr4 + 94230402 51558987 51558986 51559077 51558987 51558986 51559077 91 TTTCTTTTTTCCAGAGATGGTCAGATAACTGCTATTTTGGACCAGAAGAACTACGTAGAAGAACTGAATAGGCACTTAAGGTAATACATGA .::.:..:::.......:........x.....x...:................:..............:..:..:..:.:....xxx.... 91M 72/91 79.1% 91/94230402 0.0% 0/91 0.0% 19216167 NA +6952 chr4 + 190214555 70778300 70778299 70778444 145 TTTAAAAAGGAAGGTACAGAGTATTGTC-TGTTTTTCAAAAGTGACTTTTTTTTCTTCTCTATATTATAGTGCTACTGTAAACAACCTTCAGGCAAAAGTAGATGCATTAGAAAAATCCAACACTAAACTGACAGAGGAGGTAAGT chr4 + 94230402 51559124 51559123 51559258 51559124 51559123 51559258 135 TTTAAAAAAGAAGG----AATTACTGACATGTTTT------GTGGTTGTTTTTT-TTCCCTCTTCAACAGCGCTACAGTAAACAACCTGCAGGCCAAAGTGGATGCCTTAGAAAAGTCCAACACTAAACTGACTGAGGAGGTAAGT ........:.....----:.x..:..x.-......------...::.x......-...:..x.x:x.:..:.....x...........x.....x.....:.....x........:.................x............ 14M4D10M1I6M6D13M1D91M 112/134 83.6% 135/94230402 0.0% 12/134 9.0% 19219176 NA +8254 chr4 + 190214555 70783079 70783078 70783189 111 TTTTATCCACAGCTTGCAGTTGCAAACAACAGGATCATTACCTTACAAGAAGAAATGGAACGAGTTAAAGAGGAAAGTTCCTACATACTGGAATCCAATCGGAAGGTTAAT chr4 + 94230402 51560795 51560794 51560905 51560795 51560794 51560905 111 TTTTGCTCACAGCTTGCTGTTGCAAACAACAGGATCATTACATTGCAAGAAGAGATGGAACGAGTTAAAGAAGAAAGTTCTTACATCTTGGAGTCCAATCGTAAGGTCAGT ....:::..........x.......................x..:........:.................:........:.....x:....:........x.....:.:. 111M 96/111 86.5% 111/94230402 0.0% 0/111 0.0% 19222284 NA +3185 chr4 + 190214555 70787136 70787135 70787208 73 CAGCCTGGGTGACAAAGTGAGACCCTGTCTCAGAAAAAAAAAAAAAAAAAAAATATATATATATATATATATA chr4 + 94230402 44287077 44287076 44287149 44287077 44287076 44287149 73 CAGCAAGGATGACATCTTGTGAGCTTGGCAAAGAAAAACAGAAAAGAAAAAAATATATAAATCCATACACATA ....xx..:.....xxx..x..x.:..x.xx.......x.:....:.............x..x:...:.:... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 26500059 NA +3728 chr4 + 190214555 70787160 70787159 70787274 115 CTGTCTCAGAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA------------------------TATAAAAACAAATTGACAGTATATAACATAATTTTAGA-----------------------TTTATTTATTTGTTTTTTTTTTTTTT chr4 + 94230402 23965212 23965211 23965373 23965212 23965211 23965373 162 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTAAAGTCCACTGAAGTAAGTAAAAGGAATAAATAAAATATAGCAGTTAATAACTTAAGCTTATAGATGTATGCACTAATTAAGTCtttttatttatttatttattttttCCTT ....x.....::............:.xx.:...........x......x..------------------------x.....x.x..xx.::....xx.....x...x:...x.-----------------------...........:...x......::.. 51M24I38M23I26M 89/115 77.4% 162/94230402 0.0% 47/115 40.9% 46821948 NA +3234 chr4 + 190214555 70787166 70787165 70787214 49 CAGAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495003 1495002 1495051 1495003 1495002 1495051 49 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ............x.:......x........:.:..:...:.....x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 69292163 NA +3131 chr4 + 190214555 70787169 70787168 70787221 53 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAAAAACAA chr4 + 94230402 1495004 1495003 1495056 1495004 1495003 1495056 53 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA .:.........x.:...............:.:..:...:.....x.x.x:... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 69292165 NA +3622 chr4 + 190214555 70788145 70788144 70788227 83 CATGGTGGCATGCACCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x:.....:.........::::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -5245052 -88985350 +12425 chr4 + 190214555 70788803 70788802 70788985 183 CAGGATGTTGAGAAAGAACTGGAGATGCAGATCAGCATGAGGCAGGAGATGGAATTGGCTATGAAGATGCTGGAGAAGGATGTCTGTGAGAAGCAGGATGCCCTGGTATCTCTTCGGCAGCAGCTGGATGACCTCAGAGCTCTCAAGCATGAACTTGCCTTTAAGCTGCAGGTAGGGGAAATA chr4 + 94230402 51562141 51562140 51562323 51562141 51562140 51562323 183 CAGGATGTGGAAAAGGAACTGGAGGCTCAGATTGGGATGAGACAGGAGATGGAGTTAGCTATGAAGATGCTGGAGAAAGATGTCTGTGAGAAGCAAGATGCACTGGTGGCACTCAGACAGCAACTGGATGATCTCAGGGCCCTAAAGCATGAACTGTCTTTCAAGCTGCAGGTAAGAAAAATA ........x..:..:.........::x.....::.x.....:...........:..:....................:.................:.....x.....:x.x..:x.:.....:........:.....:..:..x...........xx.:..:............:.::..... 183M 150/183 82.0% 183/94230402 0.0% 0/183 0.0% 19226662 NA +8727 chr4 + 190214555 70789399 70789398 70789598 200 TCTGTTTTC--CCACTTACCATTAGATTCAAAAGGCATGTGTGGTTG--TATTTTAGGATTTATGTTA--TACAGGTTGTTTATCGTTATTTTCCATAACAGAGTTCAGACTTAGGAGTAAAACAGAAAAGTGAACTAAACAGTCGCTTGGAAGAGAAGACTAATCAGATGGCTGCTACCATTAAACAACTTGAACAAAGGTAAAA chr4 + 94230402 51563665 51563664 51563856 51563665 51563664 51563856 192 TCTATTTCCTGCCATTTGCCACATGATT-----------TGTTATTGCTTATTTTGGTTTTACTGATACTTACAAAAAGCACATTGCTACTTTTTGTA---GAGTTCAGACATGGGAGTGAAACAGAAGAGTGAATTGAACAGCCGTTTGGAAGAGAAAACAAATCAGATGGCTGCTACCATCAAACAGCTTGAACAAAGGTAAAA ...:...:.--...:..:...:xx....-----------...x:...--......:.xx..xx..x..--....::xx.:x:..:.:..:...:::..---..........x.:.....:........:......:.:.....:..:...........:..x....................:.....:................. 9M2I17M11D8M2I19M2I28M3D105M 146/186 78.5% 192/94230402 0.0% 20/186 10.8% 19225734 NA +39249 chr4 + 190214555 70791141 70791140 70793912 2772 CTTATTCTCTTGCTATTTTTGTGTTTCCTGTTTATCCATTTTCTCATTCTCCTTTCACTTCATTGTCATTTTTATTT---TATTTAGTGAAAAGGATTTGGTGAAACAGGCAAAGACCTTAAATAGTGCAGCAAATAAACTGATCCCAAAACATCATTAGGCATTTTTAAGT-TGGTCACGTCGCAAGTCCGATATCACAACTTAATTGTAAAAGGAAGAAATCTGAAAGTTACTACATTTAAGCTCTGATTCTATATAAAATGTCACCAAAAAGTTGACTTTGAATTTGTTGGACTTTTAAAAAACCAGTTGGAAATATAGGTTGGGTTTTTTTCTTATTGTTTTCTCCCCAGGGTTAGAAAAATTGGTATAAGTTCCTAATTAAAAGCTGAATAAACTTTGAGAAATTATTTCTGAGTTGACCAATAAATAAAAATACCACTTTCTTTAAAAAAGCCTAGGGAATTGAAGCTCTGTACATATACTAATGATGCCTT-----TACAAC----CCAGTCCTTGATAATACCAGATTCTCGGTGCATTGTTCATGTCTGTATCTGCA--AGCCTGTTCTGCCA-----------TTGCAGTGTGA---------TGAACCTAGAGGTAACTACCATGTGAA---CTTGAACTCTTCTAAAATAGTTCTGTG--TCTCTTAGACCATGACCCCTTTTCACTTTTGTTATATAGGTTTAATCCCCAAGCCAAGGATAG--------TACTTAGTATTTCACTAC-------ACTTCTATTCTCAGTAACCAAGATTGCTTGCAACTTTTTTTGCCTTGGTGACTTTTGAAAAAAAAAGAAAAGAAAAAGCAGCATCCTTATATTTCTTTAAAATACATAGAAATAAAGTTAGTAATTAGGTAACCTATGATAACATAATAATGTGG-ACGCCTGGGGAAACCCTCCTCATGTTTG--TCATCTTCTACCTCTGCCGT---------------TTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAACAATTCTAATAAAAACACTCCTCTCCTATTAACAAAAAATGATGCAGTACCCATTTTTCGT---------ATCCTGCTTTTCTTATATTGGAGT-------------AAAAAGGACAGGGTATAGACATG---------AATGATGATATTCTGCCTGGCCTGTCATTTCTTACCTGGAAA--CATTTACTTAAGAG-------------TTTCTGTTACTTTTT----------------------------GTTCAGATG-GGGATTTGCTAAAGGTTCTGGGAAGCTAATAATTGAATTATTAGAAAAACATTTCAGAATAGGAAGTAAATGATAAACTTATATTCTTTATTATTATTTAGTACAAAAATAGATTCCCAGTAGATATCCACAAGCAATATTAGCAGGGCT---------------TCTGTTTCTAAGTGACCACAGA-----------CTAACCCTTTCTAGGCTTTAACATTGTAAATAATCCTATAAACAGTTTGATTTTTTAAGATGATTTTTGATTTGAAGAGACAGGCTTTACATAAGCCTTCATTCCTTCAAAAGGTCCTGACAAAATACTTGGGTTTTTTTCTCTTTTTTTCATTCTG-GTATGCTTTGCAGCATTTCAGCTGCTTTGGTGGGG-----ACACAGATAACCCCTTCGCTTCCAGCTCTTAAAATTCTTTATCTTTTTCTTGGCAAAACCAGAATTAAGAGTGTAAGATAG-ATTCCATGTGTGC-TTATATAGGTCCCTGCACAGATTGGACTTGAACCAAAATTAAGTCCAAAGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAA--CTTATTTTAATTCTTATAATTTGCACCTATATAAACAAAGCTCCTACTGTATTCTTCTCTTCATCAACCTTTTGTGGTGATGGGTTGCCTTTTCTACGAGCA--TTTGGAAGGAGTGATCAAATACCGAAATTGAACTTTCTAA-AACCTACACATAGCATGCGTTTAAATTCTATTATATAAAGCCCCAAGTGCTTTACCTTCTAAAACATGCTTCTCTATAGGTGCAAAGTTATAAGATATGTAGAAGAAAACATCCATCAGAATCTTCTGGAGAATATGGTCAGAGTCTT-AAACAGGCCCAGT-------GCTGAGTTCTTTGTCCACTTAGTCACACATCTTTTGTGGGAATGGGA------------------------------------AAGGAAGGAGACAGCCAAAC-TCTGACAAAGGCTTTTCCTTATAGAATAACCCAAAGCCTAGGTGAGGGTTGATATATAATGTCCCA------TGATTTAATATATGTGGTTTGGGGGAAAGGACAAGAAAAAACTATAATTCCACATATAAGAAGGTAGTTG-CCCAT-TTACAAGTTCCAGTTATGTGTGTAAAACAGAAAAATTAAGTACCAAACCTATTAGGAAATTTTTTTAAAAAGTGGATTTAACTTAAATTACTGTGTACTTGAGGTTGGCTTTGGATATGGATTTTCTAAAAAGTGATGTTTTATTGTTTATCATCTAATGGCTGTAAACTGTAGTACTAGAATAAAAAAAA---TGGAAAATCAGCTTTTCCTCTGCCTGGTTCACCTTCATCTTACTTTTCTTTAGAATTTGTTTCTTCT--CCATCTTTTCCCCCCCATAATTTCTTCACCTGTGTCCTGCAAAGTTTTTTTCCTCTCTCTGTCTCTCTGTGCATTCTTCCTTGGGTTATTTTATTTTGTGTTGTGAACTTGGTCTTCTTCCCCACCATGGCTTTTGTTTTTTATCACAAGTTCATGTGGCTCACATCCAGATTGCGCCAGGCTGAGCGAAGCCGCCAATCTGCTGAGTTGGACAACCGGCTCTTCAAACAGGACTTTGGAGACAAGATCAACAGTCTGCAGCTGGAAGTCGAGGAGCTCACCAGGCAGCGGTGAAGAG chr4 + 94230402 51564840 51564839 51567418 51564840 51564839 51567418 2579 CTTTTTCTCTTGCTGTTGTTATTTTTCC---------ATTTCCTC-------------TTCATCCTCATTCTAACTTACTTACACAGTGAAAAGGATTTGGTGAAACAGGCAAAAACCTTAAACAGTGCAGCAAACAAACTGATCCAGAAGCATCATTAGACATTTTTGTGTCTGGTCACCTCACGGCTCTGACATCAGAACTCACTTATGAGGGGAG--AACTTTAGAATTGCTAAGATCAA---CTGTTAAAATGTTAATTGTCACCTAAA-GTTGATTTGGATTTTGCTGAATTTTTAAAA--CTAGT--------------GAGTTTTT-------------CTTCAGAGATTTAGTTGGAT--ATAAAAATCCCTAACTTT--GCCATTTAAACTGTGTTAAAATACCAACGAGTTGGCCAATAAACA---------------CCAGAAAAGCATAAGGAAT-GTGGCTCTGTACATC--CTGGTGATGCATGCCGTATACAGCAGCACAAGTCTTCAACATGTATGGATACTAGGTGCATTGGTCAAGCCAATAT-TGCATTGGCCAGCTCTGGAAAGTCAACTAGATTTCTGTGTTACCCTTTTTGTGAAT-TAGAGG-----AGCAAATGCATCCCTGGAAGTTGTTGAAAGTAGTTGTGTGCGTACCCCAAGCCGTTACCCATT--CACTTCTGTTTTGTGGGCTCAGCCCCAAGTCTTAAGACAGATGGGCACGGCTCAGTAGCTCATCACCACGAAGACCAGCCCTCTT-GTAACCAAGACTGCTTGCAACGATTTT-GCCTTAGTGACTTGGTGGGGGGGGAGACGGGGGAC----TTATCCTTAT--TCCTTTAAAATTCATGTGTCCAGAATTAGTAGTTAGGTGTCTTAGAGTAACATAATAGAGTGGTAAGTTCAGTGAAAACCTCCTTATCTTTGCATTGCCTTCTACCTCTGCCATGAATCCCTCTAGACATACGTTGCTGTTCT--TCCTTACTGAAGGAAGCTGAGGAGGGGTATTTTGATAGG------TCTCTCCTCTT--CCTAGAATGGGAAGTTACATGTTTTACAACAACAACAAAATCTGATCTTTGTACACTCGTGTTTAAAAGAAACAAACAAAAAAAAAAGTGCAGTGGTGGGGAGTGGAAATGGTAATTTGGTACTTGACC----GCTCCTTATCTGAGTAGTTAGTGGTTTAAAAGGAAGAGTTGCCTTTTGCTATTATTTCTTTCATTTGCTTCTACATTTCTACTGCTCGATACAAATATGGAATTTGCTGATGAAAGATGAAAA--AACAACTGAAGCTT---GGAAACATCTCTGAATGGGAAA----------------AGTAGTTGTCATCAT----------AACA---TCCCAGTGCAAAACGTTAAGCAACTGTAGTGTGGCCAATTATAAATCAATGTCCTCTTCCCTGTGGCCACAGAAGCTCAAGGTGCTGGACTGTTATAAGGCTTTACATTAGAAATGCTCCTAGA--------GATTTTTT-----------------------------------------TTTTTTCTTTCAAGAGG-------ATAATGTTTGGGGTTTTT---------------CTGAGTAAAATCAAGAGTTTTT----TGCTCAGATGAGACACTTACAAAAATAA----TTTGGTGCCAGTTCGCCA-----TTTATCCTGTT---------------------------GGATAGTACTTCTTGGGGGCAGCAGATGG---------CAGGTGTGACT-GAAATACAACTGG---CAAAAAACATCTACTAATTCTCACTAAATACATTTACAAA---------TCTTGGAGGCTCAGCCTAGTCCT-----------CCTACGCACAAGCGCGTTCCACTGC-------------TTAGCTTGTT----TAGTGGACT--CCTGCACATGAGCAGACTTGGAG-------------ACTGGATTTAAACCTTCTAGTGATGCCCAAGTCTCATGC-TTGAGA-------GTATAGA----------CTTAACCTTCTGTAATCT--TTCACTAGAAATGCATTTTAACTATTTGGGGGGGGGAAAAAAAAAGGCAAAAGCTT----------TCATCAAGGTATCCAAACAG--CTAGTTAGAACAGTTAACACCCCTGCCACTCTCCTCAAATTTCTTCCGTAGGAATTGGGGTTTGGGCTCATTTTGTTTGCTGTCACAACAACGCTAAAATAAGACAGAATTAAGCATCTGGCAG-----TTTGATGTCAGG----CCCAAAGC--AGAGAAGCTTTGGTGTCTAAATGCCCAGGCACTTGAGTCAACGTG-ACAGTCAGTGGAAGAGACCAGGAAGATGCACTAATTCTACATATA-----GTAGCTAACCTATGTTGCAAGTTCCAGCTACATGTGTAAAGCTGAGATGTAACGTAC---------------ATT------AAAATCAAATTTGACTTCAAATTTTGTGTACTTGAGGTTTGCTTTGAATCTGGAT------AAAAGTGATGTTTTAT-GTTTTTCATCTAATGGCTGTAAACTGTAGTAATAGAATAAAAAAAAAAATTGAAAATCAGAG---CTTCTGCCTGGTTCACCTACATTTTACTTTTCTTTACAATGTTTTCCTCCTTCCCATC--------------------------------------GTTTTTACCATCCCTTTTTTTGGCTTTACCTTTTCACTGGGTTTTTTTTTATTTGTTGGTTAAAGTCGGTCTTCCTCCCCACCATGGCTTTTGTTTTTTATCACAAGTTCATGTGGCTCAAATCCAGATTGCGGCAGGCGGAGAAAGACCGTCAGTTGGCACAGCAGGACAACCGGCTCTTCAAGCAGGAGTTTGGGGACAAAATCAACAGCCTCCAGCTAGAAGTGGAAGAGCTCTCCAGGCAGCGGTGAAGAG ...x..........:..x..:.x.....---------....:...-------------.....:x.....:.x.:..---..:x:.............................:........:...........:..........x:..:.........:.......:x..-.......x..:.::x..:..:....x....:.x..:.:.::...:--..::.x.:.:..:...x:x.:..---...x.xxx..:.x..x.......x...-.....:..x..x....:..:.:........--.:...--------------.:......-------------..:.xx..:x....xx::..--:..x..:.:.....:.xx--..::xx......x..xx...x..::xx:......:........:.---------------::.:......x..:.....-.x:...........x--..::......x.x-----....:.----.x....:.::.:.xxxx::...x..x.........x...x.:.x:...-....--:...x.:....xx.-----------..x.x....x.---------....:-......-----.x..x:..x.---..x...x.:x.:x...:.....x....--.x:.::.::..:.x....x..--.....:....x.:.:..:.:.::...x.:x.:x.:..:..--------x:..:....x:...::..-------..:xx:x:...:-..........:..........xx....-.....:.......xxx::::::::...x::.::.x----x:........--.:.........x...:x:xx:.:.:......:......:x.:..x::..........:x....-.x.::::.x....x......:..x....--.:::..............:.---------------.x:x:...x:...:--.:.:....x.:.x.:x:::::...::xx...:.:...::------:.......x..--.xx.:....:x:x:x...x::....x.:x---------.x:...x.:..:x..:.:.x.x..-------------.x...::.x.::..::..xx:..---------....:.:..x.xx.:.:..:..----::.:....:...::x.--:.x.x::....:..-------------..x..:...:..:..----------------------------:.x..:..:-..:.......:.x.:xxxxx.:..:--..:..:....x:x.---::......:..x....:....:----------------.x.xx..:.:..:..----------..:.---.......:x.x.x.xx:......:xx...::x...:---------------..:x:...:xx...:.......-----------..::x.:x..x..:.x:..x.....:x....:x.....x.--------........-----------------------------------------..:x...:.....:...-------.x...::.....x.....---------------...-...x:x.:x:x..:x...----....:x.:..:.:-----...x.:....----..:.x.x....:..x:x.-----......:.x..---------------------------:.....-.:.:.x..x.x..-x:.x..:.---------...:.xx....-...x:.x..:.::---....:.....x.::.x.xx.:x...xx..:x.xx.:x..:---------.....:.--..:.x::..:.:..-----------....:::.x.x:x:xx.:.:....:-------------.:.:.:.x..----.::...::.--.:.x:x:.:.....--:.....:-------------..:.:.x..:...:.....:-:.:x:x..x:.xx.....-..x.:.-------:....:.----------...x.......:x..:x.--...x...x.::....xxx.x.:x.xx.:x.x:.::.....x.xxx:x..:..x...----------.x:...::..x.:-......--.:...-------.:.:.xx:.::..:.xx::.xx...x.:x....::..:.....x..:------------------------------------..::x.:..x.x.:::..:.-....:..:-----...xx.xx:..:----........--..:x:..xx...:.:.x...xxx....------...x.:..::.:-:::..:x.x..:.:..:x..:...:.x:.xx......:.......-----....:.:-..:..-..:..........:..::........:.x..:.x:.x.x....---------------...------....x:::....:....x..x.x:...............x......:..x.....------................-....x..........................x..............---.x.........xx---.:................x...:.............x...x.x..:..:..--.....--------------------------------------......x:.x..:..:.x.:.xx..x.:.x..:.:x..x..x..x....xx.....xxxx.:..x.:.......:.............................................x............x.....x...x:.::...:..:.:x..xx..:x..................:.....x.....:.....:........:..x.....:.....x..:......x.................. 28M9D8M13D19M3I92M1I45M2D23M3D27M1D30M2D5M14D8M13D20M2D18M2D45M15D19M1D15M2D13M5I6M4I48M1D4M2I14M11I11M9I5M1D6M5D10M3I27M2I21M2D40M8I18M7I12M1D27M1D35M4D10M2D63M1I28M2I20M15I14M2D39M6D11M2D29M9I24M13I23M9I22M4D16M2I14M13I15M28I9M1I25M2D14M3D22M16D15M10D4M3D36M15I22M11I40M8D8M41D17M7D18M15D3M1I18M4D13M5I10M4D18M5D11M27D6M1I13M1I8M9D11M1D13M3D40M9D7M2I14M11D25M13D10M4D9M2D14M2I7M13D20M1I18M1D6M7D7M10D18M2D56M10D13M1I6M2D5M7I47M36I20M1I8M5D12M4D8M2D27M6I12M1D45M5D7M1I5M1I43M15D3M6D55M6D16M1D46M3I13M3D51M2I5M38D255M 1607/2334 68.9% 2579/94230402 0.0% 683/2334 29.3% 19226301 NA +9064 chr4 + 190214555 70806502 70806501 70806661 160 TCCTCTTCTCATAGAATGTGTGTAAGAACTGCAGCGGAACCTTCTGTGATGCCTGTTCAACAAATGAACTGCCTCTTCCTTCAAGTATCAAGCTTGAGCGAGTTTGCAATCCCTGTCACAAGCATCTGATGAAGCAATATTCTACCAGCCCATCATAAGA chr4 + 94230402 51574499 51574498 51574658 51574499 51574498 51574658 160 TTTTCTTCCTCCAGAACATCTGCAAGAACTGTGGTGGTATCTTCTGTGAAGCCTGTTCAGCAAATGAGCTGCCCCTCCCGTCCAGTATTAACCCAGAGCGCGTCTGCAATCCCTGTCACAAGCAACTCATCCAGCAGTATTCCACCAGTCCCTTGTAGGA .::.....::x:....::.x..:........::.:..x.:.........x.........:.......:.....:..:..x..x.....:..x.:x.....x..:....................x..x..xx....:.....:.....:..x.::..:.. 160M 121/160 75.6% 160/94230402 0.0% 0/160 0.0% 19232003 NA +3367 chr4 + 190214555 70809090 70809089 70809149 60 GTGCACCTGTAATCCCAGCTACTGGGGAGGCTGAAACAGGAGAATCATTTGAACCCAGGA chr4 + 94230402 76033204 76033203 76033263 76033204 76033203 76033263 60 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ......x....:.:.........x.::.......:x.xx.x...x..:..........:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -5224114 -89006288 +3309 chr4 + 190214555 70822459 70822458 70822525 67 TGTAATCCTAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.........::........x.xx:x...x...........:.:..x:xx...:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -5210752 -89019650 +3488 chr4 + 190214555 70822968 70822967 70823026 59 GCACCTGCAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x..:...:.........:.::..:.....x.xx.x...x.............:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -5210238 -89020164 +3615 chr4 + 190214555 70823257 70823256 70823339 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........::........x.xx.x...x.x.........:.:..x.xx::.:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -5209940 -89020462 +3874 chr4 + 190214555 70823730 70823729 70823812 83 CATGGTAGTACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGAGAGAATCACCTGAGCCCAGAAGGTTGAAGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:..:...:--......:...........::.......:x:xx.x...x...:...:........x..x::....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -5209467 -89020935 +7157 chr4 + 190214555 70825290 70825289 70825469 180 ACTTACGAACGTGGGACCGATCCTTGAGCATCGCTGCAACAGCATCCTCATGGGTCTCAAAGTGCACATCAGCTTCTCCAGTGGCCTTCCCACTGGAGCTGTATTCCATGGTGATTCTAACAGGCTTGAGTGGAGCAAAAAACTAAAC-----GACAAACAAAGGCAGTCAAGAGGAACATGATG chr4 + 94230402 51578344 51578343 51578528 51578344 51578343 51578528 185 ACTTACGCAGCTGTGCCCTCTCCTTAGCCATTGCAGCGACTGCATCGTCGTAGCTCTCAAAATGCACGTCAGCTTCTCCTGTGGCAACTCCATCAGAGTTGTATTCTATTAGGATCCTTGTGGGCTTCAGAGGAGCAAAAAACTGAAAAGAAGGAAAAACAGGGATCCAAAAGGTGAGCGTGGTG .......x.xx..x.x..xx.....::x...:..x..:..x.....x..:.:.x.......:.....:...........x.....xx::...:::...:.......:..x:x...:..x:::.....x..x.............:..x-----..x.....::.::xxxx...:x..:.:..:.. 148M5I32M 124/180 68.9% 185/94230402 0.0% 5/180 2.8% 19246946 NA +3847 chr4 + 190214555 70826098 70826097 70826274 177 AGATTGGAT--ATCTTACTGCCACACACGTTTATAATGTCTTGGGCATTGGCTTGGAAAGGTAATCCTCTCATGTGGACAAAATGCAGAGAAGAC--GTAGTTCCAAAATCAGCAGCCTCTGGAAGC------TTTTCTGGCACCTCCTTAGGCAATTCTGAGAGGTGGAACAGAAAGCACTGTTAA chr4 + 94230402 51578670 51578669 51578850 51578670 51578669 51578850 181 AAATTTGATGCATACTTCTACTACTTACATCTACTATGTCTTGGGCGCTAACCTGGGGAGGAAAACCCCTCACGTGGACGGTGCGTAGTGATGATAAGATGCTCCCAGATTGTGAA-----GAAAGCCCAGAGCTTTCTGCTGCTTCGCTAGCCACTTCTGTGGAAGGGAGGAGAAA-CATCATTAA .:...x...--..x:.x..:.:..x:..:.:..:x...........::.::.:...::...x..x..:....:......::x::.:..x..x..:--.xx.:...x.:..::xx.:-----.:....------:......x::.:..x:...x..x.....x.:::x...:x.....-..:::.... 9M2I84M2I19M5D6M6I44M1D9M 108/171 63.2% 181/94230402 0.0% 16/171 9.4% 19247428 NA +3146 chr4 + 190214555 70831215 70831214 70831297 83 CATGGTGGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTAAACCAGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x....:.:...........::........x.xx.x...x.:...:....x:.:..x:xx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -5201982 -89028420 +5322 chr4 + 190214555 70831533 70831532 70831677 145 ACTCACCGATTACCAATTTCTTCCCTGTGTTTCAACAGGGCTTGGTTGGCCATTTCTGGTTCTTCAAATTGCACATAGGCTTCCCCTGTTTTTCGCCTCCCTCTATAGTCCATCACAAAAGTAATGTCAACTATATTCAGTCCTA chr4 + 94230402 51580571 51580570 51580709 51580571 51580570 51580709 139 ACCTACCTATTCTCCATGTACTCCTTATGCCTTAGTAGGGCTTTAGCTACCATTTCCGGAGCTGCAAACTGTACATAAGCTTCTCCCGTTTTTCTTTCTCCCCGATAA------ACAAAGGTCATGTCAGTTATCCTCAAACCTA ..::...x...x:.x..x.x:...:.:..::.:.::.......x:x:x:.......:..xx..x....:..:.....:.....:..:.......x::::..:.x...:------.....:..x......::...x:...:x.... 108M6D31M 92/139 66.2% 139/94230402 0.0% 6/139 4.3% 19250962 NA +8883 chr4 + 190214555 70833112 70833111 70833290 179 ACATACCTTCCACATACCGCTGGCCCATGTACATGCGGTGCTTCTCTAAGGCTTTCTGCACATCCTGCTCTGACTCCATTTCAATTAAGGCATCACCCCTTCGTTTCCCATCTCTGTTTAGGAGAAAATGTATTCCATTCTCACCGTTGCGGATTCTGCAGTCTAAAAGTGTATGAGCA chr4 + 94230402 51582790 51582789 51582968 51582790 51582789 51582968 179 ACCCACCTTTCACGTAGCGCGTGCCCATGTATCTCAAGTTCTTTTCCAATGCTTTCTGGACATCTGCTTTTGACTCAAGCTCGATCAGGGCGTCTCCCCTGCGCCTCCCATCCCTGTTTAGGAGGAAGTGTATGCCATTCTCACCGTTCCGAATCTTACAGCCTGGAAATAGGGGAACA ..x:.....:...:..x...xx.........:x.xx:..x...:..:..x........x.....:xx:.:......x.x:..:..:.:...:..x.....x..::.......:...........:..:.....x..............x..:..::.:...:..::..:.:x:x..:.. 179M 128/179 71.5% 179/94230402 0.0% 0/179 0.0% 19250322 NA +3033 chr4 + 190214555 70838221 70838220 70838263 43 AAAAAAAAAAAAAAAAAAGGCTTAATGTTTAGTTTTAAGGAAT chr4 + 94230402 40508149 40508148 40508191 40508149 40508148 40508191 43 AAAAAAAAAAAAAAAAAAGGTTTAATGCTTTATTTAAAAGAAT ....................:......:..x:...x..:.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 30330072 NA +3726 chr4 + 190214555 70843934 70843933 70844016 83 CATGGTGGTGTACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -5189263 -89041139 +3679 chr4 + 190214555 70861331 70861330 70861412 82 GTGGTGGCACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCCAGGAGATGGAAGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----..:.:...........::........x.x..x...x.:...........:..x.xx::.:..:.. 6M1D6M4D65M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -5171870 -89058532 +3226 chr4 + 190214555 70866115 70866114 70866200 86 TTCCAAAATTCTTTTCATTATACCTTTCTATACCTTTCTTTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTAGGTGGATTCTCACT chr4 + 94230402 90152601 90152600 90152682 90152601 90152600 90152682 82 TTCCCAGCCTCTGTTCCCT----CTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ....x.:x:...x...x:.----...::.:x:..x.....::......::....:.x:...............:x.:.x.:..... 19M4D63M 57/82 69.5% 82/94230402 0.0% 4/82 4.9% -19286486 -74943916 +3107 chr4 + 190214555 70867775 70867774 70867821 47 TTTTTTTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 17835962 17835961 17836008 17835962 17835961 17836008 47 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTAAGCTGGTGAGTGT ................x................:x.:xx...x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 53031813 NA +3675 chr4 + 190214555 70871656 70871655 70871728 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.xx.x...x...........:.:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -5161549 -89068853 +3030 chr4 + 190214555 70891480 70891479 70891535 56 TCATAAATCTTTGAATGACTGGGGTTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTT chr4 + 94230402 14148410 14148409 14148460 14148410 14148409 14148460 51 TCACTGATTTTTAACTG-----GGCTCTTTTTTGTTGTTGTTGTTTTGTTTTGTTT ...:x:..:...:.x..-----..:.:............................. 17M5D34M 43/51 84.3% 51/94230402 0.0% 5/51 9.8% 56743070 NA +3136 chr4 + 190214555 70893623 70893622 70893683 61 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:.........:.::........x.xx.x...xx:.x.......:.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -5139581 -89090821 +3653 chr4 + 190214555 70904630 70904629 70904701 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGACGGGAGTATCACTTGAACCCGGGAGGTAGAGGTTGAAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x.x.x...........:.:..x.xx:..:..x.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -5128576 -89101826 +3263 chr4 + 190214555 70910406 70910405 70910552 147 TACACATGCGTGTATATACATATATACACACATATGTATGTATATATGTGTGTATGTATATCTATATATATATTTTTTTCTTAAAGGTGATATTCAAGTGGGCCTTGTTATTAAGGGAAGTCTTATGTTACCAGGCATTATTGTCTC chr4 + 94230402 41743180 41743179 41743315 41743180 41743179 41743315 136 TGCACATGTATTTTAATTTATATACACATACATCTGTATTTATATATATGTGCATTTAAAAAATGATACAAATCCTTTTTCAAATCCTTTTGTTCAAGAAG-----GTTAAAAAGGTA------GCACTAGAAAGCATTATTGTGTC .:......::.x.xx..x:.....:...:....x.....x.......:....:..x..x.xxxxx...:.x..::....::x..xxx.xx.:......x:.-----....xx....x.------::::..xx.:..........x.. 101M5D12M6D23M 89/136 65.4% 136/94230402 0.0% 11/136 8.1% 29167226 NA +3296 chr4 + 190214555 70910414 70910413 70910484 71 CGTGTATATACATATATACACACATATGTATGTATATATGTGTGTATGTATATCTATATATATATTTTTTT chr4 + 94230402 80774376 80774375 80774446 80774376 80774375 80774446 71 CACGTATGTGCATAAAAGCACACGTATGTATGTATATGTGTATGCATGCAACTGTCTGGACATAGTTTCTT .::....:.:....x.x:.....:.............:...:..:...:.xx.x.x.:x.:...x...:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -9863962 -84366440 +3301 chr4 + 190214555 70921457 70921456 70921658 202 TTTCTTTTCTTCTCTCTTCTCTTCTCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCTTTTCCTGAGATGGAGTATTGCTCTGTCACCCAGGCTGGAGTG---CAGTGGTGCGATCTCAGCTCACTGCAAGCT------------GAGTGAGCTTGCAGTTCAAGCAATTCTCTTGCCTCAGGCTCCCCAGTAGCTGGGATTACAGGCATGTG chr4 + 94230402 34366985 34366984 34367178 34366985 34366984 34367178 194 TTTTTTGTGTTTTCATTTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTT---TTTTCTTGAA----------TCTTGATTACCTAAGAGGTAGTGAGCAGGAGGTCTGCTCTCATCTGATT--AAGCTTTCTGCCTGATAGTGTGAGTT----GCTGATAGAATCCAGTTGCTGTAGGCAC----GCAGATGAAATTCCAGGCTAGTG ...:..x.x..:..x:..:.x....:..:...:........:...::....:..::..---.....:...:----------x..:x:.:...:.:.xx.x....---x:.x...x:.x.....x..x.:.--.....------------.x.....:.----.:.x.x:x...:.xx....:x:....x.----.:..x..::...x.....xx... 58M3D10M10D23M3I23M2D5M12I9M4D28M4D23M 120/179 67.0% 194/94230402 0.0% 38/179 21.2% 36554472 NA +3371 chr4 + 190214555 70927400 70927399 70927482 83 CATGGTGGCACTCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.x..--....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -5105797 -89124605 +3109 chr4 + 190214555 70930763 70930762 70930833 71 TTTTGTGCATTTTTTTCTTTTTTTCCCTCTGATGGTTTTCACTTATTTCTGTTATCCTCTCTTAGTTTAAA chr4 + 94230402 15846253 15846252 15846323 15846253 15846252 15846323 71 TTTTGTTTGTTTGTTTCTGTTTAAATCTTATTTGGTTTTCAAATATTTCTGTGATCTTCTCTAAATTTAAA ......x::...x.....x...xxx:..:xxx.........xx.........x...:.....x.:...... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 55084510 NA +3119 chr4 + 190214555 70938306 70938305 70938352 47 ATTTGCCGCCCCCGCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAGAG chr4 + 94230402 57999176 57999175 57999222 57999176 57999175 57999222 47 ATCTGCCAACTCCTCCCCTCCCCCCCCCCCAAAAAAAAGAAAAAAAG ..:....:x.:..x....:..........x........:.....:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 12939130 NA +3016 chr4 + 190214555 70938311 70938310 70938349 39 CCGCCCCCGCCCCCCCCCCCCCCCAAAAAAAAAAAAAAA chr4 + 94230402 72364013 72364012 72364051 72364013 72364012 72364051 39 CTACTCCTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAA .::.:..:x.............................. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -1425702 -92804700 +3687 chr4 + 190214555 70952849 70952848 70952965 117 CTTGTACTCACTGATGAGGACTTCTGTGTACATGCTTGGGTATTTATGCTTTTGAATTTGAAGACTCTGTCATTTTGTCATTTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGTT chr4 + 94230402 83165216 83165215 83165315 83165216 83165215 83165315 100 CTTGCACTGAGTGAGGAAGCCTT-TGTAAAAATCCCTGG----CCATGTGTTT------------TCTGTACATTTGTCATCTGGCCTTTTTTCTTTTTCTTTTTTTCCTTTGAGTT ....:...x.x...x..:.x...-...:x.x..x.:...----::...:x...------------.....xxx........:...:.......:.....:.......::........ 23M1D15M4D10M12D52M 76/100 76.0% 100/94230402 0.0% 17/100 17.0% -12212367 -82018035 +13766 chr4 + 190214555 70958855 70958854 70959051 197 TTTTCTTTTCTATTCATAGTGGTAGTCGCTCTTCTAAAACTTTTAAACCAAAGAAGAACATTCCAGAGGGTTCTCACCAGTATGAGCTCTTAAAACACGCAGAAGCCACACTTGGCAGTGGCAACCTTCGGATGGCTGTCATGCTTCCTGAAGGGGAAGATCTCAATGAATGGGTTGCAGTTAACAGTAAGTAGCCT chr4 + 94230402 51609502 51609501 51609698 51609502 51609501 51609698 197 TTTCCTCTCCCCTTCACAGTGGCAGTCGCTCTTCCAAAACCTTCAAACCAAAGAAGAACATTCCAGAGGGATCTCACCAGTATGAGCTGCTTAAACATGCCGAGGCCACGCTTGGAAGTGGTAACCTCAGGATGGCTGTTATGCTTCCAGAGGGTGAAGACTTAAATGAATGGGTTGCAGTTAACAGTAAGTTGGCT ...:..:.:.:x....:.....:...........:.....:..:..........................x.................x:.x.....:..x..:.....:.....x.....:.....:x..........:........x..:..x.....::.x............................x.x.. 197M 166/197 84.3% 197/94230402 0.0% 0/197 0.0% 19349353 NA +3537 chr4 + 190214555 70963231 70963230 70963317 87 GTACATGTAGCCATAGCTACTTGGGAGGCTGAGGTGGGAGGAATACTTGAGCCCAGGAGTTCAAGGCTGCAGTGTACCATGATCCTA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA .:..:.....::x:.........::........x:xx.x.:.::......:.....:..:.:x:.....:..---.x......x.:. 72M3D12M 58/84 69.0% 84/94230402 0.0% 3/84 3.6% -5069975 -89160427 +3390 chr4 + 190214555 70963692 70963691 70963762 71 CACCTGTGGTCCCAGCTACTTGAGAGGCTGAGGTGGGAAGATCGCTTGAGCCCAGAAGGTGGATGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x...:..:............:........x:xx.x::.x.:.....:........x.xx:x....:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -5069515 -89160887 +3022 chr4 + 190214555 70963807 70963806 70963857 51 GAGACTCCATCACAAAAGAAGAAAAAAACAAAACAAAAAAAACCCCAAACA chr4 + 94230402 30146865 30146864 30146915 30146865 30146864 30146915 51 GAGGCTTTCACAAGAAAGAAGAAACAAACAAACAAAAAAAAACCCCAAACA ...:..::xx..x:..........x.......xx................. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 40816942 NA +3045 chr4 + 190214555 70965292 70965291 70965407 116 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAGTGGTTCTTTGCAAAGTTTAAAAATTTATAACTCCTGGTAAGATTGATCAAGAAAAAAATATTTTAATATTTTAAAAATAATATTAA chr4 + 94230402 14116867 14116866 14116982 14116867 14116866 14116982 116 ATCTTAAAAAAAAAAAAAAAACTAAGAGAGAAATCCTTTGTATTGTTCCTAAATTGTGGAGTTTTGATAATGATGCCCCAGAAGACTATCCTGTCGTACTTTTTAGCTGTTACTAA ....:................xx..:.:..x::.:.....:.xx...:xx.....xxx:.x.::..:...x:x..x:.x....:.xx..x:.x.x:..:...xx.:x.:x..:... 116M 71/116 61.2% 116/94230402 0.0% 0/116 0.0% 56848425 NA +8339 chr4 + 190214555 70969921 70969920 70970030 110 TGCTTTACAGCTGTGGATTTCTTCAATCAGATCAACATGCTTTATGGAACTATCACAGACTTCTGTACAGAAGAGAGTTGTCCAGTGATGTCAGCTGGCCCAAAGTAAGA chr4 + 94230402 51614175 51614174 51614284 51614175 51614174 51614284 110 TGCATTGCAGCTGTTGACTTCTTCAACCAGATCAATATGCTTTATGGAACCATTACGGACTTCTGCACAGAGGAGAGTTGCCCCGTGATGTCTGCTGGCCCAAAGTAAGA ...x..:.......x..:........:........:..............:..:..:........:.....:........:..x........x................. 110M 96/110 87.3% 110/94230402 0.0% 0/110 0.0% 19355746 NA +3084 chr4 + 190214555 70971884 70971883 70971953 70 CTTCCCTCTCTTTCTCTTCTTTCTTCCTTCTTTCCCTTCCTTTCTCCCTCCTTCTTTCT--TCTTTCTCTAC chr4 + 94230402 20861466 20861465 20861537 20861466 20861465 20861537 72 CTTTCATCCTCTTGTCATCTTTTTCCCTTCTCTCCCTTTTTCCCTCCTTCCTGTCTTCTAATTTTTATCTGC ...:.x..:::..x..x.....:.:......:......::.::....:....x::....--.:...x...:. 59M2I11M 49/70 70.0% 72/94230402 0.0% 2/70 2.9% 50110418 NA +3034 chr4 + 190214555 70973446 70973445 70973497 52 AGCTACAGAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAACATA chr4 + 94230402 88382707 88382706 88382758 88382707 88382706 88382758 52 AGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATA ...x.x:.........xx:x.........::.:..............:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -17409261 -76821141 +11311 chr4 + 190214555 70975126 70975125 70975289 164 TGTGTGCTTTTTATCTCTCCAATGCAGATATGAGTATCATTGGGCAGATGGAACGAACATAAAGAAACCTATTAAGTGCTCTGCACCAAAGTATATTGATTACTTGATGACTTGGGTTCAGGACCAGTTGGATGATGAGACGTTATTTCCATCAAAAATTGGTA chr4 + 94230402 51619980 51619979 51620143 51619980 51619979 51620143 164 TGTCTTCTTGTTGTTGTCCCAACCCAGGTACGAGTACCATTGGGCAGATGGGACAAACATAAAGAAACCAATTAAGTGCTCTGCGCCAAAGTACATTGATTACCTGATGACTTGGGTCCAGGATCAGCTGGATGATGAAACGCTATTTCCTTCTAAAATAGGTA ...x.x...x..:.:x::....:x...:..:.....:..............:..:..............x..............:........:.........:.............:.....:...:..........:...:.......x..x.....x.... 164M 137/164 83.5% 164/94230402 0.0% 0/164 0.0% 19355146 NA +12827 chr4 + 190214555 70979113 70979112 70979296 184 TTATCTCTTTTCTAGGTGTCCCGTTCCCAAAGAATTTCATGTCTGTGGCAAAAACTATACTCAAACGCCTCTTTAGGGTTTATGCTCACATTTATCATCAGCATTTTGACCCTGTGATCCAGCTTCAGGAGGAAGCACATCTAAATACATCTTTCAAGCACTTTATTTTTTTTGTCCAGGTAAG chr4 + 94230402 51622492 51622491 51622675 51622492 51622491 51622675 184 TTTCCTTATTTCTAGGTGTACCGTTCCCAAAGAATTTCATGTCAGTGGCAAAGACGATTTTAAAGCGCCTCTTCCGAGTTTATGCTCACATTTATCACCAGCACTTTGATCCAGTGATTCAGCTACAGGAGGAGGCACATCTTAACACGTCCTTCAAGCACTTTATATTTTTTGTTCAGGTAAG ..x:..:x...........x.......................x........:..x..x:.x..:........:x.:....................:.....:.....:..x.....:.....x........:........x..:..:..:..............x........:........ 184M 156/184 84.8% 184/94230402 0.0% 0/184 0.0% 19356621 NA +15275 chr4 + 190214555 70981953 70981952 70982602 650 TTCTGCCTTTCTTTATATCATGCATAGGAATTCAACCTTATTGATAGAAGAGAACTTGCACCACTCCAAGAACTGATTGAAAAACTCACCTCAAAAGACAGATAAAAGGATGCAGAGCTGT---GCAAATTGTTCCTCAAATGAAGCAGTGTGGAGTGTATTGGGGATTTTGTTATATTTTGTTTTTATCTGGATTGTTTTTGTCCTAGGTTTGGGGGCGGGGGCTTGTTTGGGTTCCTTTTTCTTTATTCTGATTATGTGAAACCATATTCTATTGCTAGGGGAAGCCAAGAACCATTCTCTATACACTTGATAAGGGTAA--ATTTATC--TTAGTG----------------TTTTTAAACTTGGTTTTGGTTACTTGAGGAGTTTTTTAATAATATTGTGTG-CTGCAA----GAAAGTGCTTG---------TTGATTGAACTGCCGATGGATTGGTTTCTGTGTGGTATAAATTGTGGCCCATTT--ATGAAGTCCCCAAAAGA----GTTATGTT-TTTAAGTGCCTTGGCAGGCTCACTTCTGAGGTGCAAAACATAGATATAGAACTGAACAGGGCTTGAAAC---AATATTAGGATTACTACCCAGGGCACTTACTGGTGCATGTTGTA------------------ACATATCTA-------------TGATAAAAGCCATAGTTTACCTAAAATGGTGATTTCCAGCCTTTACTGC chr4 + 94230402 51623246 51623245 51623894 51623246 51623245 51623894 649 TTGTGTTTCTCCTCATCCCTATTACAGGAATTCAACCTTATTGACAGAAGAGAGCTTGCACCACTTCAAGAACTGATTGAAAAACTCACCTCTAAGGACAGATAAAAGGAAGAGGATTTTTTAAGTCAGTTGTTTCTTTAAGCAAGC-GTGTGGTATATGTT-----TTTTGTT-CATTTGTTTTTTA-------------------------AAAAACAAAAG------------------------------------AAAAACCTGTGCTGTTATTCCTAACAGCCAAGATCTACTCTCTGTGCTTTTATTAGGAGAAATCTTTTGTCTGTTAGTGACATGCAGTAAATAGCTTTTTTTTTTTGATAGTTATTCATTGTGGGATTTTAGCA-GGTGCTGAGTGTTTGTAAAAGGAAACGTGCTTGGTTGGGGGTTTGACT---CTGCTGGTGGA-TGGGTTCTGTATTGTGTCAGTGGTAGCCCATTCTAATGAAGTCCCTGAAAGACTTCCTTACATTCTCTAAGTGCCTTGGCAGACTCACTTCTGAGGTGCAAAGCAC--ATACAATACTGAACATTGCTGGAAACAGAAAAATATGAACTAACACCCAGGATACTTACTGATACTTGTTTTAGaaaaaaaatatatatatacatatatataaataCTTACAGTAAAAAAAGCCATA----ACTTAAATCGATGATCTCCAGCTTTTAATAC ..x..::.:..:.:..x:.xxx:.:...................:........:...........:..........................x..:..............x.x:..x:.x.---.:x.:.....:..:x..xx....-......x:.:.:..-----.......-:....xx......-------------------------:::::.::::.------------------------------------:...x.x.:.x..:..::.xxx::x........x.:.:.....:.:.x:..:x..:.:.x..--x...:..--......----------------.....xxx:...:.xx.x:..xx...x..::....xxx.-::.::..x...-:..:..----:..x.......---------....:.---....:.:....-...x......:.x..:.x.:.x..:.......:--..........::.....----x...::..-.:...............:...................:..:--...:.:x........xx...x.....---..x..xx.:.:..x:.......::........:.:.x....x..------------------......x..-------------.:.x..........----..:....x:.:....:......:....x.:. 121M3I23M1D14M5D7M1D13M25D11M36D62M2I7M2I6M16I39M1D11M1I6M4I11M9I6M3D11M1D33M2I17M4I8M1I41M2D26M3I44M18I9M13I14M4D31M 418/571 73.2% 649/94230402 0.0% 157/571 27.5% 19358707 NA +6407 chr4 + 190214555 70988001 70988000 70988167 167 ATGTCAGAAAATCTGTAATATGTTTTATTCAAAAGATGTAAATAATGTATACAGAC--TTGTATGTGATGGGATGGGAAATATTTAAATTCTAGGTGTTTTTTTTTTTTTAAAGAAGAAACTCAA---TGTTTATAAGAAAAAAATGAATAAATAGTTACGTTTGGCCATGA chr4 + 94230402 51629910 51629909 51630061 51629910 51629909 51630061 152 ATGTCTGAAAATCCGCACCGTGTT-----CGAGAGTTGTAAATAATGTACACAGATTGTTGTATGTGACGGGAC--AAAATATTTAAATTCTAGG---------TTTTTTCAACAAGAAGCTGAAGGCTGTTTATAAGAGGCA----ATAAAATAGCTATGTTTGACCACGA .....x.......:.:.x::....-----.:.:..x.............:.....:--..........:....:--:..................---------......x..x.....:..x..---...........::x.----.xx......:..:.....:...:.. 24M5D27M2I16M2D19M9D21M3I15M4D25M 120/147 81.6% 152/94230402 0.0% 25/147 17.0% 19358091 NA +7371 chr4 + 190214555 70998038 70998037 70998197 160 TTCCTCAATTTTATCTTTCC----------TCACAACAGCTGCAGGGAAGTCAACATTTGTGAATATCCTTAAACAATTGTGTGAAGATTGGGAAGTGGTTCCTGAACCTGTTGCCAGATGGTGCAATGTT---CAAAGTACTCAAGATGAATTTGAGGTATGAAAATAAAAT chr4 + 94230402 51632289 51632288 51632461 51632289 51632288 51632461 173 TTTCCTGATGTTATTCTTCTGGACTGCTTTTTACTACAGCTGCTGGGAAATCAACGTTTGTGAATATTCTCAAACAAGCTGATGAGGGATGGGAAGTTGTTCCTGAGCCTGTAGCTAGATGGTGCAACGTCCAACAAAACTCTGAAGAGGATTGTGAGGTATGGTGAAAGAAT ..:.:::..x....::...:----------.:..x........x.....:.....:...........:..:......x:xx:...:.:x........x........:.....x..:...........:..:---....::x..x....x..x.x.........:x:.x.:... 20M10I101M3I39M 119/160 74.4% 173/94230402 0.0% 13/160 8.1% 19365749 NA +3011 chr4 + 190214555 71006101 71006100 71006155 55 AAAAAAAAAAAAAACAGAAAAAACAAAAACACCAAAAAAAAAAAAAAAAAAGCAA chr4 + 94230402 53758075 53758074 53758129 53758075 53758074 53758129 55 AAGAAAAAAAAAAGAAGGCATAACATGGAGATTAAAAAAAAAAAGAAAAAAGCAA ..:..........:x..:x.x....x::.x.::...........:.......... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 17248026 NA +3415 chr4 + 190214555 71006678 71006677 71006750 73 TGCACTTGGGGTTACAGCTACTTGGAAGGCTGAGGTTGGAGGACTGCTTGAGCCCAAGAAATTGAGACTGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x..x:...x..........:.........x::x.x.:.x::.....:....::.:x..x:.:...... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -5026527 -89203875 +3482 chr4 + 190214555 71021862 71021861 71021944 83 CATGGTGGCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCTGGTAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--......:...........::........x.xx.x...x::........::.x..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -5011335 -89219067 +12231 chr4 + 190214555 71022357 71022356 71022566 210 TTCAAAATAGGAACTTACAATGTCTCAGAAAAATGGTGGGAATGTTCTTCAGATGATGTATGAGAAACCTGAACGATGGTCTTTTACCTTCCAAACATATGCCTGTCTCAGTCGAATAAGAGCTCAGCTTGCCTCTCTGAATGGCAAGCTCAAAGATGCAGAGAAACCTGTATTATTTTTTGAACGATCTGTGTATAGTGACAGGTATGT chr4 + 94230402 51634877 51634876 51635086 51634877 51634876 51635086 210 TTAAAAACAGGAACTGACTACATCACAGAAGAGTGGTGGAAATGTGCTTCAGATGATGTACGAGAAACCGGAGAGGTGGTCTTTCACCTTCCAGATGTACGCGTGCCTCAGCAGGATTCGGGCTCAGCTCAAATCCATTGATGGCAAACTCAGAGAGGCAGAGAATCCTGTGGTGTTCTTTGAGCGATCTGTCTATAGTGACAGGTACGT ..x....:.......x..x.::..x.....:.:......:.....x..............:........x..:x.:........:........:.::..:..x..:.....:x.:..xx.:........::xx..:x.x:.......:....:...x........x.....:x.:..:.....:........x..............:.. 210M 162/210 77.1% 210/94230402 0.0% 0/210 0.0% 19387480 NA +11129 chr4 + 190214555 71023557 71023556 71023728 172 AGGTATATTTTTGCATCTAATTTGTATGAATCTGAATGCATGAATGAGACAGAGTGGACAATTTATCAAGACTGGCATGACTGGATGAATAACCAATTTGGCCAAAGCCTTGAATTGGATGGAATCATTTATCTTCAAGCCACTCCAGAGGTAAAACCCAATAAAAATGTGT chr4 + 94230402 51635842 51635841 51636010 51635842 51635841 51636010 169 AGATATATCTTTGCAGCTAATTTATATGAGTCTGACTGTATGAATGAAACTGAGTGGACTATTTACCAAGACTGGCACGACTGGATGAATAAGCAGTTTGGTCAAAGCCTTGCACTGGATGGAATTATTTATCTCAGAGCCACTCCTGAGGTAAGG---AATAAGAGTTTAT ..:.....:......x.......:.....:.....x..:........:..x........x.....:...........:..............x..:.....:..........x.:..........:........:x:.........x.......::---.....:.:.x.:. 156M3D13M 141/169 83.4% 169/94230402 0.0% 3/169 1.8% 19387715 NA +9380 chr4 + 190214555 71025782 71025781 71025944 163 CCTTTTTCTTCCATCTCTTATTACTTGCTTTTAGACATGCTTACATAGAATATATTTACGGGGAAGAAATGAAGAGCAAGGCATTCCTCTTGAATATTTAGAGAAGCTTCATTATAAACATGAAAGCTGGCTCCTGCATAGGACACTGAAGTAAGACTTATTT chr4 + 94230402 51637339 51637338 51637499 51637339 51637338 51637499 161 CCATCTTTTTTTCTTTTTAATT--TTGCATTTAGAAATGCTTAAATAGGATTTACTTGCGTGGAAGAGATGAAGAGCAAGAAATTCCTATTGAGTATCTGGAGAAGCTTCACTACAAACATGAAAGCTGGCTTCAGCATAAGACACTGCGGTAGGATTTGTTT ..x.:..:..::x.:.:.x...--....x......x.......x....:..x..:..:..x......:............:x......x....:...:.:...........:..:.................:.x.....:.......x:...:..:..:... 22M2D139M 127/161 78.9% 161/94230402 0.0% 2/161 1.2% 19388443 NA +6363 chr4 + 190214555 71026615 71026614 71026822 208 TTTTTTTTGT--TGAATTTCTGATTATTTTATTAATCTCTCTTTTTAAACAGAACCAACTTCGATTATCTTCAAGAGGTGCCTATCTTAACACTGGATGTTAATGAAGACTTTAAA---------GACAAATATGAAAGTCTGGTTGAAAAGGTAGATTTAGAC-AGACTACAAACAAATATTTGTTTTTTCTAAA------AAAGTGTACTGAGTGGTGAGAAAA chr4 + 94230402 51637902 51637901 51638120 51637902 51637901 51638120 219 TTTGTTTTGCAGTGAAT-----AATGTTTTCTATGTTTCTGTTCCAATACAGAACAGATTTTGAATATCTACAAGAAATACCTATTTTAACATTAGATGTTAATGAAGACTTCAAAGGCAAAAAGGACAGATATGATCACATGACTGAAAAGGTAAAGTCAGATGAAACAACATACATATCTACATTAATTGCAAACCTGTCAAAATGAATTCA--GGTGAAAAAA ...x.....:--.....-----.x.:....x.xx:.:...x..::x.x.......x:.:..:..x.....x.....::.:.....:......:.:.................:...---------....:......xx::x..::..........:.x.:...:-.:..x...x...x..x.x::..xx..x:...------...:..x.:.x.--.....:.... 10M2I5M5D94M9I39M1I31M6I12M2D10M 145/201 72.1% 219/94230402 0.0% 25/201 12.4% 19388713 NA +3246 chr4 + 190214555 71040331 71040330 71040426 96 TCAATTAAACCTCTTTCTGTT---ATAAATTACCCATTTTCTGGC---AGTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAGATGGAGTTTTGCTCTTGTTGC chr4 + 94230402 43396559 43396558 43396660 43396559 43396558 43396660 102 TCAAACAATCCTTTGCCTATTGAAATAATTTGTCCTTGCCTCAGCTGCAGGTCTCTTTTGATTTTTTTTTTTTTTTTTAAGCTACAGTTTTGATGCTTTTGC ....x:..x...:.x:..:..---....x..::..x.x:::::..---..x...:....xx....................x.:x.......x.x:.x.... 21M3I21M3I54M 68/96 70.8% 102/94230402 0.0% 6/96 6.2% 27643772 NA +3230 chr4 + 190214555 71041623 71041622 71041713 91 TTTCTTTATTGATTTCCTATTTTCTATTTCTGATTTGTGCTCTAATTTTGATTATTCCTTTTCTTATGTTTATTTTGGATTTAATTTGTTC chr4 + 94230402 77531017 77531016 77531107 77531017 77531016 77531107 91 TTCCTATATTTTTTTCCTATTCTCATGTACTATCTTGTTCTCTTTTGTGGATTTCTCCTGTCTTCATGTTTCTTTTGCTTTTCATTTTTTC ..:..x....xx.........:..xxx.x..:x:....x....xx.x.x....x:....x.::.:......x.....xx...x....x... 91M 63/91 69.2% 91/94230402 0.0% 0/91 0.0% -6489394 -87741008 +3447 chr4 + 190214555 71044508 71044507 71044607 100 GTGGTGCCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAAGGGGAGGTTGCAGTAAGCCAAGATGAGGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .......-----:.x......:...........::........x.xx.x...x.:.........:.:.:xxxx:..:..:..------..x....x.... 7M5D70M6D12M 66/89 74.2% 89/94230402 0.0% 11/89 12.4% -4988693 -89241709 +3020 chr4 + 190214555 71073954 71073953 71074014 61 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGAAAGACCACTTGAGCCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:...........::........x:xx:x::.x.......:...:.:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -4959250 -89271152 +3317 chr4 + 190214555 71074545 71074544 71074636 92 TATGTCTAGGACGTAGC-CATGATT------ATTAAGAAAAAGAAAGGAAGGAAAGGAGGGAGGAGGAAGGAAAGAGGAAAGGAAGAAAGGAGAAAAAG chr4 + 94230402 24028107 24028106 24028205 24028107 24028106 24028205 99 tatgattAGGATATAACATGGGATTTTCTTAAGTGAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGACAG ....x:.....::..:.-::x....------.x.:......:....:xx:....:..:......:..:..:.:....:.:..::.::...x...:.x.. 17M1I7M6I68M 62/92 67.4% 99/94230402 0.0% 7/92 7.6% 47046438 NA +3256 chr4 + 190214555 71074572 71074571 71074634 63 AAGAAAAAGAAAGGAAGGAAAGGAGGGAGGAGGAAGGAAAGAGGAAAGGAAGAAAGGAGAAAA chr4 + 94230402 91777260 91777259 91777322 91777260 91777259 91777322 63 AACAAAACAATAAAGAAAAAAGCAAGGAGGAGGTAGGAAGGAGGAGAGGAAAAAAATAGAAAA ..x....x:.x.:::.::....x.:........x.....:.....:.....:...:x...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -20702688 -73527714 +3252 chr4 + 190214555 71079637 71079636 71079718 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGTGGTGGGAGGATCACTTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.::......x.x:xx.x.:.x.......:..::.:..x.:x:.....:.. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% -4953564 -89276838 +3784 chr4 + 190214555 71092964 71092963 71093037 74 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........:.::........x.xx.x...x.........:...:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -4940240 -89290162 +3101 chr4 + 190214555 71093143 71093142 71093183 41 TTTTGACCTCTTTTGTTTTTTCTTTTCTTTTTTTCCTTTTT chr4 + 94230402 90788251 90788250 90788291 90788251 90788250 90788291 41 TTTTGACCTCTTTTTTTTTTTCTTTTTCCTTCTTCCTTTTT ..............x...........:::..:......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -19695108 -74535294 +3525 chr4 + 190214555 71115279 71115278 71115399 121 ATACATATGTAACTAACCTGCACAGTGTGCACATG--TACCCTAAAACTTAAAGTGTAATAATAAAAAATAAAAAAATAAATAAAAAAGAAGGAAACACACAAACAAACAAACAAACAAACAA chr4 + 94230402 79014219 79014218 79014332 79014219 79014218 79014332 114 ATAAATATTTAACTACTCTAGGCAGTCTGAGCTTGATTTTCCTGA---TTACAAC------ATAGAAAATAAAGCTACCAATGAAAAAAAGAAAAACACACACACACACACACAAAAAAACAA ...x....x......x:..:x:....x..x:.x..--.x:...:.---...x.::------...:........:xx.:x...:.....:.:::.........x...x...x.....x...... 35M2I8M3D7M6D62M 80/112 71.4% 114/94230402 0.0% 11/112 9.8% -7898940 -86331462 +3255 chr4 + 190214555 71164542 71164541 71164596 55 AAAAACAAAACAAACAAACAAACAAAAAAACCCGTAAGACCTAAAACCATAAAAA chr4 + 94230402 23148128 23148127 23148182 23148128 23148127 23148182 55 AAAGACAAAACAAACAAACAAACAAAAAACCACACACAACACAAAACCCTCAAAA ...:.........................x.x.::.x:..x:......x.x.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 48016414 NA +3276 chr4 + 190214555 71187344 71187343 71187419 76 CTGCAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGACGGAAGCCAGACCCCAGGAGGTGAGCGCCCGGCCCCGG chr4 + 94230402 51694021 51694020 51694092 51694021 51694020 51694092 72 CCGCAGCCCC-CGC-CCGCCGCCACGCTGGAGGAGCGCCCCAAGCCCGAGCCCCGCAGGTGAGCG--TGGCCGCGG .:........-.:.-.........x:...........x.xx.....x..x...x.x.........--:....x... 10M1D3M1D50M2D9M 59/72 81.9% 72/94230402 0.0% 4/72 5.6% 19493323 NA +3128 chr4 + 190214555 71195198 71195197 71195261 64 CTGATGTTCTTTTCCTTTTTTCCTGTATTTGAGTTTTTTTTTTTTTTTTTTTTTT---TTTAAAGAG chr4 + 94230402 38901783 38901782 38901849 38901783 38901782 38901849 67 CTAATACTGATTTTTTTTTTTTCTGTACTTGAATTTCTTTTTTTCTTTTCTCTTCATACTTAGAGAG ..:..::.xx...::......:.....:....:...:.......:....:.:..:---:...:.... 55M3I9M 47/64 73.4% 67/94230402 0.0% 3/64 4.7% 32293415 NA +3113 chr4 + 190214555 71196710 71196709 71196776 67 TATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:...........::........x.xx.x...x.:..x.....::.:..x:xx:.....:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -4836501 -89393901 +3085 chr4 + 190214555 71196833 71196832 71196884 52 CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCAGACAGA chr4 + 94230402 10137926 10137925 10137977 10137926 10137925 10137977 52 CCAGAAAAAAAAGAAAAAAAGAAAGAAAATAGACAAATTAAATGCAAGCAGA ...:........:.......:...:....x.:.x...xx.......::.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 61058907 NA +3910 chr4 + 190214555 71204209 71204208 71204300 92 TGAAAATTGATGATGATTTTTAGCACTTA----GCTTCTTATCTTCAAAGCACTTTCCAAATGTTAAATAATTAATTGCCACAACCCCCATGTGGG chr4 + 94230402 41768492 41768491 41768587 41768492 41768491 41768587 96 TGTAAGATGATAATATTACTTAGCACTTACAGCGCTTTTCATCTTCAAAGCATTTTGCAAACATAAACTAATTAATCTTCCCAACACGTCTGTGAG ..x..:x....:..:x.x:..........----....:.:............:...x....::.x..x........:x:.x....x.x:x....:. 29M4I63M 67/92 72.8% 96/94230402 0.0% 4/92 4.3% 29435717 NA +3886 chr4 + 190214555 71204222 71204221 71204319 98 TGATTT-----TTAGCACTTA------GCTTCTTATCTTCAAAGCACTTTCCAAATGTTAAATAATTAATTGCCACAACCCCCATGTGGGCGTAGAATAGCAAGCATGT chr4 + 94230402 41385165 41385164 41385272 41385165 41385164 41385272 108 TGATTTAATAATTAGCATTTATAGAGTGCTTTCTGCCTTCAAAGCACTTTGCAAACATTAACTAATTAATTCTTGCAACTCCCCTGT-AATTTGGGGAAGCAAGCACAT ......-----......:...------....::.::..............x....::....x.........x:::....:...x...-:::x.:.::x........::. 6M5I10M6I60M1D21M 72/97 74.2% 108/94230402 0.0% 12/97 12.4% 29819057 NA +3071 chr4 + 190214555 71217432 71217431 71217503 72 GTGTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGTGGAGATTGT chr4 + 94230402 76033204 76033203 76033275 76033204 76033203 76033275 72 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ...::.x....:.:.......:...::........x.xx.x...x::........::.:..x.xx:.::... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% -4815772 -89414630 +3707 chr4 + 190214555 71225212 71225211 71225294 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCAGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:...........::........x.xx.x...x.::..........:..x.xx:..:..::. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -4807985 -89422417 +28818 chr4 + 190214555 71235679 71235678 71236654 976 CGTGTTTGGCATCGG--GAGGCCCTAAAAACGCTGTCATTCCTTGGATGG-ATTCTGAGGTCTTATTTAGCATATGAAATTGCAGAGTAGATCCTATTATGTAAGGAGACAGGAGGACAGCATAATGTGGTTACAAAATGAAGAACTTTGTGCCCTTCAGGGAAGAGTTAACAGG--GCAGATATACATAGAGAAAGATGTGTGATAAGAA-TGTGGAAA---------------ATGAATGAATGGGTGGCATGTAT---------CTGTG------TGTATTGTCGAAGCCGGGTTGCTGGATAATCCTCAGATGTCAGATTTCCGTAAGGCCAGCATGTGACTCAAAGCTTGCCACTCAACAGAGAATACTGGGCTGTGCTGATATTAAGAGGCTGGCTGGAAGCTAGGCTCCCACTGTGCACTAGCCTACCTCCCTGTCGCTCTCTGCGTGTGGGTGGGTGTGCATGTGTGTGTGTGTGAGGGTATACATTTTATGCAGTGGGTGTTTAAAGAGCTAAGCACTGAAGCTGGATTTCCACAAACGATCATCACGAGCACTCCAGACACAC-CAAACTTCCTCTCTTGGTATTTTTTTTTTTTTTTTGCTTTCATCCTTTTTA-------------------AAAAGAATTTTAAAACCCTAAAGGGGAGAGCCCCCAACATCCTGCCTACAGGATT------GGGATTAT-TTTCTCTTACCTGTCTATGTGGGTGCCCTCTCAAGGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAGTGACTCTGCCC-TGCTAACATGAACAACAGCTTGCAGGTTAACCTGCCCAGAAGCTGGGCTGCTCCAAGTGGCTCGCTCCAGGAGAAGTCTGAGCATTCTTTTTTTCTTTTTTATTACTATAGGATGGAGGATGAAGCTGTCCTGGACAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGAAGAAGTAGAAGGTGAG chr4 + 94230402 51714498 51714497 51715471 51714498 51714497 51715471 974 CGTGTTTGTTTTTGGAAGAGAGCTTGCAAATG-----AACCATTGAAAAGCATTCAGGCCCTTTATTTTATGTATGAAATATAGCAGTAAGTATGTCTGGGCAATGCCCCAGGAGGACTTCACGACAGAGGTATAGAATTAGGAGCCT---GTTCTGTAAAGAGGAGCTGATAAGAGGTGGAGAGGAATGGAAGGGGAAG---GAGAGGAACTGCTGAAATCAGTCTTCAAGTAGATGAATGAATGGGTGACACACATAAATGACTGCTGTGATGGCCTGACTTACTGGAGCTTGGTCTCTGGATAATCCTCGTATGTCAGATTTCTGTAAGGCCAACATGTGACACAAAGCTTGCCTCTCGACAGACAAG--TGTGCTTTGCTGGTATTAAGAGGCTGGCTGAAGCCGAGTCTCCCACTGTGCATTCGAAT------------------GCGTGCGTATGTCTGTGTATA-GTATGTGTGCTGCAGCCAACATCCT------------TTAGAAGAACTTGAAAGGGAAACTGGAATTCCACAAGCTCTTGGCTCTTGCAT---AGACAGTCTCAAACTTGC---CTGAGTGTGTGTAT---------------GTCCTTGTTAGaaaaaaaaaaaaaaagaaaaaagaaggaaaaaaaaggaaagaaaaaagaaacagaaaaaaaCCACAAAGACTTCTAGCCGGGATTACCTTTCTCACACCTGTCACCACTGATGTCCTCTCAAGGTTAGAATTCGAGCAACGTGAGGCCAGCTTATAC-CAAACGCCATTTGAAAGAAGCTCTATGAAGGAACAGCAGGCACTGGAAGGAGGACGGGAGTGCCCACAGTAACATGAACAACAACTTACAAGTCAACCTGCCCAGGACTTGGGCTGGTTCAAATAGCTCGCTCCAGGAGAAGTCTGAGCATTCCTTTTTTCTTTTTTATTACTATAGGATGGAGGACGAGGCAGTACTGGATAGAGGGGCTTCCTTCCTTAAACATGTATGTGATGAAGAAGAAGTGGAAGGTAAG ........x:x.:..--...:x.:.:x...:.-----.x:.x...:.x:.-....x.:xx::......x:::........xxx:x....::.x:xx:.:x.:..x.xxx.........xx..::.::x:.x..:.:...x.:..:.:.---.::..x:.::..:...:.:.:.:.--.::..x.x:x..:..::::..x.---..x.:...-..:x....---------------...............:..:::..---------.....------..xx..:::.:...:x...:x.............:x............:.........:........x...........x...:.....x..x--..x...x.....:.................:.:x.x..x.............:.x.xx.------------------.....:.x:..xx....:..:-..:......:x:x:.:xx....::.------------..x:....:..x::x.xx...:.....x........:.xx.::x.x.xx...:---.....xx.-.......x.---..x:..:.x.x.x.---------------:.....x...-------------------.......xxxx....xxxx....:::.:..xxx.x:.x.xxxxx.x:.x..:x..------.......:-......x:.......xx:::x.:..:................:.x:...x.:...:.:..:..x...x.-.:.:.:...xx...:..:....x::.....x.::.....:...::....:..:::.:xxx.....-::x..............:...:..:..:...........:.x:.......x.:...:.:............................:................................:..:..x..x.....:.................:..:.....:.................:......:.. 15M2I15M5D13M1I97M3D24M2I23M3D8M1I8M15I23M9I5M6I93M2D59M18D21M1D25M12D53M3D8M1I9M3D14M15D10M19I55M6I8M1I69M1D65M1I190M 640/910 70.3% 974/94230402 0.0% 130/910 14.3% 19521181 NA +14471 chr4 + 190214555 71255203 71255202 71255434 232 TTGTGTACCT--TCCTTAGGCCACCATACCATTTACATCGGAGTCCATGTGCCGAAGAGTTACAGGAGAAGGAGACGTCACAAGAGAAAGACAGGGCACAAAGAAAAGAAGGAAAAGGAGAGAATCTCTGAGAACTACTCTGACAAATCAGATATTGAAAATGCTGATGAATCCAGCAGCAGCATCCTAAAACCTCTCAGTGAGTACTCTCTGAGCGTTGG-TGCCTCTCTCTGC chr4 + 94230402 51733637 51733636 51733866 51733637 51733636 51733866 230 TTGTATTCCTATTCCTTAGGTCATCACACTGTTTACATTGGGGTCCACGTGCCGAAGAGCTACAGGAGAAGGCGGCGTCATAGGAGAAGACCTGGGCACAAAGAAAAGAAAGAAAAGGAGAAAATTTCTGAGAATTACTCTGACAAATCAGACGTAGAAAATGCTGATGAGACAAGCAGCAGCATCCTCAAACCACTCAGTAAGTACT-----GGTGTTGATTGTCACTCTCTAC ....:.x...--........:..:..:..::.......:..:.....:...........:............x.:.....:.:.....::x.x.................:..........:...:........:.................::.x..............:x.x..............x.....x......:......-----:.:....:-..:.x......:. 10M2I196M5D8M1I13M 189/227 83.3% 230/94230402 0.0% 8/227 3.5% 19521566 NA +3298 chr4 + 190214555 71277482 71277481 71277593 112 GCTTCCCTTCCCTTCCCTTCCTTTTCCTTCCCTTTTCCTTCCTTCCTTCCTTCTCTTTTTCTTTCTTTCTCTTTCTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCT chr4 + 94230402 85792743 85792742 85792854 85792743 85792742 85792854 112 GTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTT .:...x....:::..:..x......:.:.x:x:x.x::..:.x.x:..:......xxx...x..::.::x..:.x:..:x..xx.:......:...:.:.:....:..:.:. 112M 66/112 58.9% 112/94230402 0.0% 0/112 0.0% -14515261 -79715141 +3384 chr4 + 190214555 71277584 71277583 71277713 130 CCTTCTTTCTTTCTCTCTCTCTCCTT-CCTTCCTTCCTTCCTTCCTCTCTCTCTCATTCACTTCTCTCTCCTTCTTTCTCTGTTTTTCTTTCTCTTTTTCTCTCGCTCTGTCTTTTTCTGTTGAGTTTTCA chr4 + 94230402 83326928 83326927 83327057 83326928 83326927 83327057 130 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCTGAAACTCAGTCCTCACCT-CTGCGTTTTTA ..:x.x...:..:x:..x.:x..:..-:...:..xx.::....:..:.....:.......x:...x.::::x:x...:.....:...::..:::::.....xxx:...x...:.:x:..-:..x.....:. 26M1I92M1D11M 78/129 60.5% 130/94230402 0.0% 2/129 1.6% -12049344 -82181058 +3173 chr4 + 190214555 71293427 71293426 71293514 88 GTGATGCACACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCACAAGAATTGCTTAAACCCGGGAGGCGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033201 76033200 76033291 76033201 76033200 76033291 91 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ...:.....:--......:.:.........::........x.x::x...x::...:.....:.:..x:xx:..:..:.----....-...... 10M2D66M4I4M1I6M 62/86 72.1% 91/94230402 0.0% 7/86 8.1% -4739774 -89490628 +14917 chr4 + 190214555 71296731 71296730 71297312 582 ATAATTCTTCACTTATTACACATACTTGAAAATCTGCTCTCTCAGTTTTTCAAGTTAAAAGTATTCTGTCCTTGTGGATCTGT---CATTTCACAGACATACCTGTTTGCTTTGTTGGCTAGGTGATAGAAAATAAAGGGCAGAACATAAGAAATTATCCTTCATTGGATATTA--GTTCGTTCTC----TCATCTGGATTTTAAAGTATTA-CTGGAAAAAAATCCTCTAATCTTCTATTAAAGATAA--GATAAGTTCTTACAATGTATAGGTTGTTTGTAGGACTGAGAAGTATTGGAAATATGTCTTGGCTCAACTAGTTGGCCACCCTTGAGAGCCAGTAATACCAA-GTGGCTAAGCTTAGTTGCACCCAGTGGCAAGAGACATTCTGAGGTTTCCCATGTATTGGGAG-----GAGGCC-CAAGACAAAGAGGTCCTTGTAAAACTCAGCTAGAGACTTGGCTGTGGGACAGAGTCCTAGAAGAATCTACATTAACTGTGCCCTGCCCAGAGGCATGCTGCTACAGCCTTTGTGCTGGGAACCACCAGGATCATGGTATGAGTTTGCGTCTCCAGGTAGACACTCTGAGCTTCT chr4 + 94230402 51765096 51765095 51765669 51765096 51765095 51765669 574 ATAATCTGTTGTTAATCCCTCAAGTCTGAACCTGTGACTTCCCAG-----AGGGCCCAAAGCCTTTTGTTGATTTTGATTTGCAGCCCTATTATAGACAAATTAATGTACATGAGTGACAGCATGCCAGAGGGACACAAGAAGAAAATGAGTAATTAACATATATTGGGTATTACTGATTGCTTTTATGATTATCTGGATTTTAAGGTATTAGCTGGAAAAATAACTCCTAATCCCTTATTAAAGATAAAAGGCAAGTCATTAAAAGTAGAAGGTTGTTTTCAGTCCTGAGAAGCCATGGAAATATGTCTTGGCTCCAGCAGCAAACTAACTTTAAGAGCCTGTAATTCCAATGTTACTCAGCTTAGTTGTTCTCCTTGGTAAGGGAATTTCTGAAGTTTCCCATGTGCTGGGAGGTAGAGGGGCTGCGAGACAAAGCGACCCTTGTCACACG-AGCTGAGCACTTGGCAGTGGGTCAGGAGCCTTGGAATATCTGTGTGGAGCGAGCCCTGCCCA-------GCTGC---------TGGGCTGTGAACTTTCAGCGGTGTGGTCTGAG-----GTCGCTTAGCACGCAGTGGGAGCTTCT .....::x.:::.x..:x.x..x:::....xx.x..x::..:...-----x::.::x....:x..:...:xx.x.x...:..:---.x.x.:.:.....x.::x:.x.:.x.x:x..:.x:x:..x:...:::xx.x::.x....x..:..x.....x.x.x:.....:.....--.x.:.:.:.:----.:.............:......-.........x.x.::......:::............--.::....:x...x..xxx:x.........x:..xx........:xx...................x.x:..:x::.:.x.:..:......x.....x....-..x:..x..........:x.:.xx...:...:..xx......:...........::......-----.:...:-.:........x.::......x.x..x-....:::x.......x.....x...::x...x.:.:x....:::.x:.x:.x..........-------.....---------..x....x....:x:...x:x::....x....-----...x.:x:.:.x:..x.xx........ 45M5D33M3I88M2I10M4I22M1I36M2I101M1I62M5I6M1I26M1D62M7D5M9D32M5D27M 369/555 66.5% 574/94230402 0.0% 46/555 8.3% 19531635 NA +3132 chr4 + 190214555 71303753 71303752 71303808 56 TTCCCTTTCTTCTTCCCCTCCCTCCCTTTTTTCCTTTTTTCCCTCCCTTCCTCCCT chr4 + 94230402 86523039 86523038 86523094 86523039 86523038 86523094 56 TTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCCACTCT ...:.::...:.x.................:....::::xx..:.......x.:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -15219286 -79011116 +3470 chr4 + 190214555 71306453 71306452 71306525 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGATAATTGCTTGAACCCAGGAGGCGGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.xx..x::...........:..x:xx...:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -4726752 -89503650 +8666 chr4 + 190214555 71306812 71306811 71307183 372 AAAAAGAAAAGGTGACTTATTTTAGGAAAGATGTT-GCTTTTTCTTCGCCTGCTCTTGCTTTAA----AGAATGGATCAT----AAGGTTCTGGTTAATGTCATAAGGAGCTCACATGTATTTTGCTAATTATA---AGTCATGCTTCTCAGTGACCCTTTTAACTGTTAAAATGACCTCCAGATTCTGATTTTTCTTCACTCTTTATTAATGGTTAACAAACTGTTTAATGCGCGGTAGGAAAGCCAAGTAAGCCTGAAGCATTTAGAAAATGGCATGTGAATTAGTTGTAAACTGTTTCAGTAAACATTAAATGGGTGGCAATTACTTAAAG---TGATTGCCTAAGTTTCATTAAAGTATTTAAAAGA-----AAAAATATGTGCTTAA chr4 + 94230402 51768828 51768827 51769205 51768828 51768827 51769205 378 aaaaaaaaaacagaac-------aaaAAACCTGTTCACTTCTGACTTGCCTGCT-TTGAGCTAACCATGGGGTTGACCATTAGGAAGGTCAGTGCTTATGCAAAAATCACCCTCCTTGCATTTTGCTAATTACAGGCAGCTGTTCTGTTCAGT---CCAAGCCATCCTTAAACTGACCTCCTACTT--GTTTTTTCCTCCCAACTGTCTAATAATTAACAAACTACTTAATGCACGACAAAAGA-CCAATTAACCCTAAAGGGTTTAGTGAACTACATGTAGATGAGTTGTAAAATGTTGCTGTAAACATTAAATGTTAGGCAATTACATAAAGCAATAATTGATACAGTTGCATTTAGGAGTCTAGAAGAGGGGGGGGAAAAAGTGCTTGA .....:....x:x:..-------.::...xx....-:...:.xx:.:.......-...xx:...----:.::.x..:...----.....:xxx.:.x...:x.x..xx.x.::x.x..:.............:.---..:::.x..x:.....---..xxx:x.::x.....x........x:x..--.x......:..x.xx:.xx:....::..........::.......:..::.::.:.-....x...x...:...x:.....x:..:x:.....::..x.........x....x.x..............xxx.........x.....---.:....x:xx....x....x.:.x:.:..:....-----:::..x.x......:. 16M7D12M1I18M1D9M4I12M4I50M3I16M3D30M2D56M1D89M3I34M5I16M 242/358 67.6% 378/94230402 0.0% 34/358 9.5% 19537984 NA +7546 chr4 + 190214555 71322526 71322525 71322698 173 AGATTTCCTAATGTTGATGAGAATTGAGTCTGACTTTAGAAACCTCGGGGTATAAATTGTTCTGATAATTGGTCCAAGTTGAACCTGGAGAAAATGCTGATGTGTTCA--CTCTTAAGCAGAGTGATTCATCATGTAAACCTTATCATAG-CAGCTCT------GGCAGAAGGGAGAGAAGT chr4 + 94230402 51778522 51778521 51778702 51778522 51778521 51778702 181 AGATTTCTCTGTGTTGATGGAAATTGATTTTGCCTTTGGGAACCTGAGGGTATAAATTGTACTCGTAATTGGCCTGAGCTGAACTAGGAGAAACTGCTGATGTGTTCATTCTCTTCAGT-GAGCGATTTGTTGTATAAGCCACTTCATGGACTGCTTTTTAGTGAGCACGAGGGAAGGGAAT .......::x:........::......x.:..x....:.:.....x:.............x..x:.......:.::..:.....:x.......x..............--.....x..:-...:....::.::.:...:..x:x....:.-.x...:.------:...x:.....::.:.:. 108M2I9M1D30M1I7M6I18M 127/172 73.8% 181/94230402 0.0% 10/172 5.8% 19544004 NA +3060 chr4 + 190214555 71329554 71329553 71329664 111 TAAGTATCTTATTTTATTTGTAATGATTATAAATGGAATTACTTTCTTGATTTCTTTTTCAGATTGTTCACTGCTGGCATGTAGAAATGCTACTGATTTTTGTGTACTTGA chr4 + 94230402 45411994 45411993 45412104 45411994 45411993 45412104 111 TAATTAGCTTCTTTCATTTACACTGAGTTTCTACGTAAATATTTGCTTGTTTTCTAGGTCTTGATTTTTATTGTTAACTTTTAGAAAAACTGCTATTTTTCTTTCACTTGA ...x..x...x...:....::.x...x.x.xx.:.x..x..:..x....x.....xxx..xx:x.x..:.:..:.::.x.x......x:..:..:x....:x.x:...... 111M 70/111 63.1% 111/94230402 0.0% 0/111 0.0% 25917560 NA +3289 chr4 + 190214555 71338482 71338481 71338592 111 ATCAATTTCCAACTGCTTTTCTTTCTCTCTCTCTCTTTCTTTTCTTCTTCTTCTTCTTTCTTCTTTCGTCGTCTTCTTCTTCTTCTTTTTTTTTTTTTTGAAAGGGAGTAA chr4 + 94230402 14829147 14829146 14829255 14829147 14829146 14829255 109 ATCAATTG--AAGTATTCTTTCTTCTCTGTCTGTGTGGTACTTTTTTTTTTTTTTTTTCCTTTTTACTCCTTCCAGTTCCTCTTCTACTTTATTTATTTGTAAAGAAATGA .......x--..x.::.:..::......x...x.x.xx:x:..:..:..:..:..:..:...:..x.x:.x..:xx...:......x:...x...x....x..:.:.:.:. 8M2D101M 70/109 64.2% 109/94230402 0.0% 2/109 1.8% 56509335 NA +14772 chr4 + 190214555 71338757 71338756 71339510 754 TTTTTCAAGTGCATTGAAGTGTGACTAAACATTTTTGGGTACTACCATTCTGTAAAGAAGAGG-GCCCATCTTGTTAAATATTCCTTCATCAACTTTGCAGTTAGCCAGTTATTGGCAGGGAGAAGCCTGCGAGGGCATGAGCTTTAGGCATTGGACAGAGGGAGGGTGGGTGGGA--GGCGGGGACTTGGGGGATCTCAGGATTGGGGTACTTTGTTGTCCCTCCCACTGCTGTATGAAAAAGTGACTGGTTCAAGCTGGCTTT-TGTCTTATAATTTTGGATGAGTCATAAGTGGAGAAGGAGGGGAAGTGAGTGGTTAGACCTCAGCTCATCTGAGGGCTAAAGGTTCTTTGTGACACATCACACAGAAT-------------TGGAGTGCTGTCCTTCTG-GAGAGTGGTGGAGAACCAAGATACAGTTCAGAACCAAAGGAATAGAGAAGGGCTT-TGA--TTTCTTTTTGGCTTTAGATT-----GGGGATTTGGGAGGCTTAGCAGGAAAGA----------------------------------TGTCCACTG--AAAATGTGGAAGGGAAG-------------------CCCAGTAACCTTGGGGAGAGAGGAAGAGCCCGGAGCTCCACTTTCCTCAGGGTTGTCCAGCCAATGTTTAACCACAGTATTTTCACTTCTGCAGTCTCTCCTGCTGCAGAACGCATCCGATTCATCTTGGGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAAGGAAACAGCCAGGTGAG chr4 + 94230402 51781926 51781925 51782690 51781926 51781925 51782690 765 TTTTTTCAGTTCATTGGTGCCTGACTAAATGCATTCAGTCACATTCTTCATGTATAGATGAGACAAACTTTCTGTTAAATATTCCT----------------------GTGTTTTCTAGCAATAGGGCTGGGAAGGTTATGGCTTGCCTTGTGGGCCAATGAGAGCATGAGCTGGGCTGGCAGGGG---GGGGAAAGCCAGCTACGGGATGCTG-----------CCACAATAAGCCCCAAAACAGTTTGGCTGAAACTGGTTTTACATCATATAA---------------------AAAAGGGGGCTAAG----------AATCTCAGCTGATCAGAGTACTAAAGGTCCTTGGGCACGCACCATAGAGCATATTGGTTTTGAGCTTGATAGCTCTTTTTTTACAAGGGCTGCAAATTGCTGTAACATAGTTAAGGACTGTAGAAAGAGGCAAGTTTTCCTGAACTTTACTCCCAGCTTGAAGTTTTAAGAAGTAAGTGAGAGGCGAGGAAGGGAAGAGAGGGTGATACACAGACCCTCGCTCACGCCCCTCTGTCCACGAGTAGGATGTCAAACGGAAAAGACGGCTTGGAGAAACAACTGAATGGCTTTGGGGAGAAGGGGAAGGAGAGGAGCCGCACGTCCCT---GGTCATCTCTCAGGCTGTTAACCACAGTATTTTCACCTCTGCAGTCTCCCCCGCTGCTGAACGTGTCCGCTTCATTCTGGGAGAGGAAGATGACAGCCCAGCACCCCCACAGCTTTTCACGGAGCTGGATGAGCTTCTGGCTGTTGATGGACAAGAAATGGAATGGAAGGAGACTGCAAGGTGGG .....:x...x.....:x.:x........:::x..::.x:..xx:.x.:x....x...x...:-:xx.x.::..............----------------------..xx..xx:..x:.x.:.x...x..:..:xxx:....xxxx::.x..x..:x.:...x:..:.:x..:--...:...:---....:.xx:...xxx:...:.:..x-----------....x::x:xx:xx....xx.x:...:.x..:....:...-::..x.....---------------------.:....:..xx...----------:.:.......x...x...x:........:...x.xx..:..:..:.x..x..-------------.x..xx...x.::..:.:-:..:.:x.:::.xx:.::x:.:.:....x..:..::x..:..x..:x...xx:.:-...--...x:.::::....x.::..-----::.x.xx..:.....xx:.x...:....----------------------------------.......x:--.::....x:..x....:-------------------.:x.:.::.:.........::..:.::.xxx.....:x...x.:...---...::..:xx.x:::xx...................:...........:..:.....x.....::....x.....::..........:..............x.....x.....:........:...........x.....:..x.....:..:..:.....:........:..x..x.....:. 63M1I22M22D68M2I8M3D25M11D40M1I10M21D14M10D52M13I18M1I55M1I3M2I20M5I28M34I9M2I17M19I47M3D185M 448/684 65.5% 765/94230402 0.0% 151/684 22.1% 19556831 NA +12117 chr4 + 190214555 71349879 71349878 71350113 235 TTTAATTGCTCTTCACTAATCTCATCTTCCTAGGTGGATCAAGTTTGAAGAAAAAGTGGAACAGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCTGAGGACATGTATGGAGAAAGGATCCATCATGCTTGATCGGGAGGCTTCTTCTCTCCCACAGTTGGTGGGTAAGTATGCTG-TTTGAATTTTATC-----CTATTTTTTTCGGCTT chr4 + 94230402 51788968 51788967 51789199 51788968 51788967 51789199 232 TCTCATTGCTCTGCCCT---------TTTGTAGGTGGATAAAGTTTGAGGAGAAGGTAGAACAAGGTGGGGAAAGATGGAGTAAACCTCACGTGGCCACGTTATCCCTGCACAGCTTGTTTGAGTTAAGGACGTGTATAGAGAAAGGCTCAATAATGCTGGATATGGAGGCCTCTTCTCTTCCTCAGGTGGTGGGTAAGTAAGCTTCCTTGGCTCTTGCCATAAACAATTCCCTTCAGCTT .:.x........x.x..---------..:x.........x........:..:..:..:.....:.................:..:..:..:........:..:.....x..:..:..:......:.:.....:.....:........x..x..x.....x...xx......:........:..x...x.............x...x-:...:x.:..::.-----.x...:::...:.... 17M9D180M1I13M5I16M 177/226 78.3% 232/94230402 0.0% 15/226 6.6% 19560911 NA +14828 chr4 + 190214555 71356963 71356962 71357222 260 GGTCTTGTGACTGAGTTTTGTTTT-------TTGCTTTTGTTTTTGTACCAGAGATGATTGTTGACCATCAGATTGAGACAGGCCTATTGAAACCTGAACTTAAGGATAAGGTGACCTATACTTTGCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAACCTTCGGTCCCTGGCTGACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACCAACCCTGATAATGGTAATGCAGAGGCCAGCTGGCTGCTGCTTTCTCTT chr4 + 94230402 51791614 51791613 51791880 51791614 51791613 51791880 267 GGCTTTGGGATTCATTTTCCTTTCCCCTCTCTCATCCCTTTCTACGCAACAGAAATGATTGTCGACAATCAGATTGAGACAGGGCTCTTGAAGGCAGACATGAAGGACAAAGTCACCTACACGCTGCTCAGGAAGCACCGGCACCAGACCAAGAAGTCCAACCTGCGCTCTCTGGCAGACATTGGAAAGACCGTCTCCAGTGCAAGTAGGATGTTTACCAACCCCGATAATGGTAATGCAGAGGCTAACTGGCTATAGCCTTCCGTT ..::...x..:.x.x...:x...:-------.::::::.x.:.x:.:.x....:........:...x................x..x.....:x.x..xx.x.....:..:..x.....:..x:.....x.............:..:........:........x..x..:.....x........:.....x................................:....................:.:......::x..:...:x.. 24M7I236M 203/260 78.1% 267/94230402 0.0% 7/260 2.7% 19565349 NA +10546 chr4 + 190214555 71368912 71368911 71369261 350 TTCTCCTTTAACCCGCTTGTGTG---ATTTGCTTTAGCATTTTTTTCTTCTTAATTAATGCTTCCA-TCCTCATCCTTGCTGTGGCTGCTCATGTGTCCTCCTCCTCCTCCTGTCTTCTGCTTCTGACACTAAAGTGCGCAGCCCGCTTGAGAACTCAGTGCCCTGCCTAGCAACCCGCACCTTGGATGATGACCCCCGAGTGCGGCGCACTCCCAGCGTGGGATGGCTAAGTAAGTCAATGGCTGGGGAAAGGGCAAGGAAGGTGGCGGTGGTCGGGAGAGGGAGGGCAGGAAGATCGG-------------------GCTCATGGTTAC-TGAGTGGAGGGAAACCTCAAGA---ATGCCTGAAAGTGTAAGATG chr4 + 94230402 51797532 51797531 51797898 51797532 51797531 51797898 367 TTGTCTCCTAACTCGCTTTTTTGTGCAATTGCTTGAGCGTTTCTTTTTTTTT------TCCTTTGACTTTTCAACTTTGCTCTC-TTCCTCCCCTCTGCTGCTGCTGCCTCTGTCTCCTGCTTGCACCACAAAAGCACGCAGCCCACTCGAGAGCTCCGTGCCCTGCCTAGCGACACGCACGCTGGATGATGAAATCCAAGTGCAGCGCAGCCCCAGCGTGGGATGGCTCAGTAAGTCAGAGGCTGGGATGCGGG-GAGCGGGCTGGGGGGCTTC--CAGAAGGAAGGATGGGTGAGTGGCACCAGCCGGTGCCTTAATGCTCACTGCTGCATGAATGGGGAAAAAACTGGAAATCTATACTTGAGGGAACGGAATG ..x..:::....:.....x.x..---.x......x...:...:...:..:..------.x...:x.-.::...x.:.....x.x-:.x...x:x.x.x..x..x..x.::......:......x::x...x....::........:..:....:...x..............:..x.....x:..........xx:..:.....:.....x:.................x.........:x.......:x:x...-:..x::.x...x..xxx..--x...:...:..xx..:x..x:..-------------------.....:x.:.:.-...:...:.::...x..x:.:.---..:.:...::.x:::::... 23M3I26M6D8M1I17M1D170M1D19M2D23M19I12M1I22M3I20M 236/340 69.4% 367/94230402 0.0% 37/340 10.9% 19571380 NA +3028 chr4 + 190214555 71368940 71368939 71369000 61 CTTTAGCATTTTTTTCTTCTTAATTAATGCTTCCATCCTCATCCTTGCTGTGGCTGCTCAT chr4 + 94230402 85074963 85074962 85075023 85074963 85074962 85075023 61 CTCTATTATTTTTTTCTTCTTGATTAAAGTTTCCAATTCCACTGTCACTGTTGCTGCTTGT ..:..x:..............:.....x.:.....x:::..::x.::....x......::. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -13706023 -80524379 +3535 chr4 + 190214555 71376018 71376017 71376215 198 TTCAACCAAAACTACATATATATACATATATACACGTATATATATATACATATACACGTATATATATACATATATACGTGTGTATATATATATACGTTTGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACACACACACACACATATATATGTGTGTATATATATT chr4 + 94230402 54005575 54005574 54005768 54005575 54005574 54005768 194 TCCAATCAGCTTGACATAAACCTACAATTCCCAAAACATGTGTGTAAACATATAGACAACAACATTTAGTTACTTATGTGTGTA-ATGAATGCAGAATCAACAAATTATATTGA---ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATT .:...:..:xx:x.....x.:x....xx.x:xx.x::..:.:.:..x.......x..:xxx.:..x..xx..:x..:.......-..:x..::.x:x.::xxx.xx.....xx.---........:..::.:......:.:.............x.x.:x:::x.xxx::....x.x.xx..::.:......x:.... 84M1D29M3D81M 115/194 59.3% 194/94230402 0.0% 4/194 2.1% 17370443 NA +3097 chr4 + 190214555 71376027 71376026 71376181 155 AACTACATATATATACATATATACACGTATATATATATACATATACACGTATATATATACATATATACGTGTGTATATATATATACGTTTGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACA chr4 + 94230402 25906305 25906304 25906459 25906305 25906304 25906459 155 AACAACTTTCATATACTCACAATCTTGAAAATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA ...x..x.x:......x:.:.xx.x:.x.x....x:.x....:x.:.:x:x:...xx:.x.x...:x:x..xx.x.x.x..:...:x.x.x..:...:..:..x..:.:....:x.x..:.::......x.....::.x:.:...:.xx:..:.. 155M 89/155 57.4% 155/94230402 0.0% 0/155 0.0% 45469722 NA +4752 chr4 + 190214555 71376033 71376032 71376135 103 ATATATATACAT-----ATATACACG-TATATATA-TATACATATACACGTATATATATACATATATACGTGTGTATATATATATACGTTTGTGTATATATATATACATA chr4 + 94230402 71715478 71715477 71715587 71715478 71715477 71715587 110 atatatatatatgaagaatatacacaatatatataatatatatatatTCATGCATATGTACTTGCAAACATTTGTACATATCTTTGTGTTTGTGTATACATAGATACATA .........:..-----........:-........-....:.....:x.:.::....:...x.::.x..:.x....:....x.x.::...........:...x....... 12M5I9M1I8M1I74M 81/103 78.6% 110/94230402 0.0% 7/103 6.8% -339445 -93890957 +3094 chr4 + 190214555 71376053 71376052 71376106 54 GTATATATATATACATATACACGTATATATATACATATATACGTGTGTATATAT chr4 + 94230402 55694455 55694454 55694508 55694455 55694454 55694508 54 GTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ....::...:.....:..::::....:.:...x.x:..:............... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 15681598 NA +3025 chr4 + 190214555 71376101 71376100 71376161 61 ATATATATATACGTTTGTGTATATATATATACATACACATATATACCTGTATATATACACA chr4 + 94230402 63788529 63788528 63788589 63788529 63788528 63788589 61 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATA .......:x..x:x..:xx:...:...........x...x..........:.:....:.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 7587572 NA +7421 chr4 + 190214555 71397517 71397516 71397724 208 CCAAAGTCTTTGTGTT-----------ATTGAAAAGAAGTCTTTAATTAGAGTTTACTTGTGTTTTTCCAGGTAGCCCAGCCATGACCCATAGGAATCTGACTTCCTCCAGTCTGAATGACATTTCTGATAAACCGGAGAAGGACCAGGTAAGCAAAAAATTCTTGCTTCTTTGAAATGTAAGAGAACGTATATCTAAAA----GATGCTGAGAAAGGATTAG chr4 + 94230402 51802637 51802636 51802852 51802637 51802636 51802852 216 CCTGAGCCTCTGTATTCTTCTGACTGGATTTAAATAGGTGCTTTAATTGGTATTGGCAT-TGTTCTTACAGGCAGTCCAGCCATGACTCACAGAAATCTGACTTCCACCAGTCTGAATGACATCTCTGACAAGCCTGAGAAAGATCAGGTAAGCTTCAGATTTGGACTTC------ACTTGGTGATATGTTTGGTTAGGAGCTGGGTGTTGAGGAAGGAATAG ..x:..:..:...:..-----------...x...x:::xx........:.x:..x:.x.-....:..x....:..:...........:..:..:............x................:.....:..:..x.....:..:.........xxx.:...:xx:....------.:x.::x::x.:..x.:x:..::.----.:..:....:.....x... 16M11I32M1D110M6D24M4I19M 142/201 70.6% 216/94230402 0.0% 22/201 10.9% 19594880 NA +3635 chr4 + 190214555 71439297 71439296 71439370 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCAAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.xx:x...x...........:.:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -4593907 -89636495 +11919 chr4 + 190214555 71440602 71440601 71440778 177 TTCTTCTCATGCAGCTGAAGAATAAGTTCATGAAAAAATTGCCACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGAGGTTGACTTTTTGGATACTCCTTTCATTGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGGTGCCCTGACTGAAGTTCCTGTGCCCACAAGGTAAG chr4 + 94230402 51820956 51820955 51821132 51820956 51820955 51821132 177 TTCTACTAATGCAGTTGAAGAATAAATTCATGAAGAAATTACCCCGTGATGCTGAGGCCTCCAACGTGCTGGTTGGGGAGGTAGACTTCCTGGACAGTCCTTTCATTGCCTTCGTCCGGCTGCAGCAGGCAGTTATGTTGGGTGCTCTGACAGAAGTCCCCGTCCCTACGCGGTAAG ....x..x......:..........:........:.....:..x........x..:..:...........x...........x.....::....:.x...............:..:x....:........x..:...:.......:.....x.....:..:..x..:..:x...... 177M 146/177 82.5% 177/94230402 0.0% 0/177 0.0% 19619646 NA +9897 chr4 + 190214555 71442303 71442302 71442588 286 GTAGAGGTAAAATACAGCATCACTTAAATTAGCAAAAGGAGCCAGGCAATTCAAGGCAACGTAATTCAATAATATTATATAACTATTTCAGGGCAATAATCTGAACGATATATCCTTGCATGTTAACATTTTT---CCAGGAAATAGCTTCATCCATTTGCTGTCCTCTGAACTAG-TACAAGCCTTAATCACTGAGTAGGGAGTCTCATTAGCTTTTTGTGTGTAGGTAATGTGGGGTCATTTACAGTGGCTGCATCCTGTGAAATCCAATAAAGGAAATCCCACAAGG chr4 + 94230402 51822629 51822628 51822909 51822629 51822628 51822909 281 GCAGAAGTAACATCAGGAATTGTTTGTTTTGGTAGTGGGAGC-AGGAAGCTAGATCGAGGATTGTGGAATGACCTCAT-----TGTTCAATAGCATTAACCAAGACAAGATGTCCTTCCATGCCAACATTTTTTTTCCAGGAAATAGTATTATCCATTAGCTGTCCTCCAAACCAAATGTTAGCCCTAATCA--AAGTAGGGAAGCTCATTAGATTGCTTT-TGTGAGTAATGAAGAGGTATTTGCAGTGGCTGCATCCTGTAAAATTCAATCAAGGAAATCCCATAAGG .:...:....x..xx:.x..:::..:xx..:.:.:x:.....-...x.::.x:.xxx.:x:.x:.xx...:.:x.:..-----.:..:x.x:...x...:.x::..:.x..:.....x....::.........---...........:x.:.......x.........::...:.:-.::x....:......--:........:x........x..x:.x.-...::......x:.:.x:....:.................:....:....x............:.... 42M1D35M5D50M3I40M1I15M2D27M1D68M 193/277 69.7% 281/94230402 0.0% 13/277 4.7% 19619674 NA +3550 chr4 + 190214555 71443086 71443085 71443161 76 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATATATATAAATTTTTTG chr4 + 94230402 4618357 4618356 4618432 4618357 4618356 4618432 76 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATATTATATG .::.x.......::..............x:....::......x.x......-....x......-....x...x.x.. 51M1I11M1D13M 60/75 80.0% 76/94230402 0.0% 2/75 2.7% 66824729 NA +3267 chr4 + 190214555 71443091 71443090 71443157 67 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAAATTT chr4 + 94230402 60831530 60831529 60831596 60831530 60831529 60831596 67 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x...x.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 10611561 NA +3016 chr4 + 190214555 71443093 71443092 71443159 67 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAAATTTTT chr4 + 94230402 60831530 60831529 60831596 60831530 60831529 60831596 67 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x..x.x.:x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 10611563 NA +3328 chr4 + 190214555 71443095 71443094 71443155 61 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAAAT chr4 + 94230402 60831530 60831529 60831590 60831530 60831529 60831590 61 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAAT ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x.x..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 10611565 NA +6320 chr4 + 190214555 71447644 71447643 71447738 95 AGGTTCTTGTTCATTCTCTTAGGTCCTAAGGGGAAAGCCAAGTCCTACCACGAGATTGGCAGAGCCATTGCCACCCTGATGTCTGATGAGGTAGG chr4 + 94230402 51829607 51829606 51829701 51829607 51829606 51829701 95 AGATTTCTCTTCATTCTACTGGGACCTAAGGGCAAAGCAAAGTCATATCATGAGATTGGCCGAGCCATTGCTACCCTCATGTCTGATGAGGTAGG ..:..::.x........x:.:..x........x.....x.....x..:..:.........x..........:.....x................. 95M 79/95 83.2% 95/94230402 0.0% 0/95 0.0% 19618037 NA +13469 chr4 + 190214555 71450371 71450370 71451309 939 TCTTTTATTATTCTTTAGGTGTTCCATGACATTGCTTATAAAGCAAAAGACAGGCACGACCTGATTGCTGGTATTGATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTGGGGAATGGGATCCAGCAATTAGGATAGAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGGTAAATTATAGGCAGTTGATAATTTTCAGTAGCTGAGATGACTCTGAGAAGGAGGTTGTGTTAAAAAAAAAAAGTGAAGTCAACCTGT-----TGTTCTAATATTTTCAGGTTCCTGTTTAACTTGATGTATTTTCTCAAATGGATCACTTATGTGCCTTGGTTTCACGTTTCCTTGGCATTGTAAAATAAATGTTATGTGGTATGATGTTCTTCAGTTATTATAAATTGGAGATCTCAGATTACTACATGGGAATGTATCACAGACATGCTTTGGCGATGTTTTGGGGACCCCCTGTATATCTGGAAACATAAATTTACTGAAGATGAGTCCTTGTAGATGTACATGGTTAAGACATTGGGTAAAATAGTTGAAGAGAAACAATTTTCTAGAAATCTATTT----TTTCCCAGTTGAAGCAGTTTCCCTCT--TTTAAGACATACAGTTCA---TTCAACTTTCCTATTCATCCAGTCATTTGTATTGGTTCTAAATGTAACACTTAAAGAACTGTCTGTTAGATAGCAGAAAGAAATAACAATCTTTCACCTTAAGGGTTTTCACTCCATCTCCCCATTAGCCAGAGCATGATACAGCTAAGAAGCGAATGAATAAAATAAACTAATATACTCTTGGGCTCTGTTGTCTTGCTTAGAAAGAATATGTACTCAGGTGGAGAGAATGTTCAGATGAATGGGGATACGCCCCATGATGGAGGTCACGGAGGAGGAGGACATGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTAACTGA chr4 + 94230402 51829876 51829875 51830606 51829876 51829875 51830606 731 TCTCTCCTTTCCTTGCAGGTGTTCCATGACATTGCCTATAAAGCCAAGGACTGGCAGGACCTGATTGCTGGCATTGATGAGTTTCTGGATGAAGTCATTGTGCTCCCCCCTGGGGAATGGGATCCAGCTATTAGGATAGAACCTCCCAAGTCTCTTCCATCTTCAGATAAAAGGTAA-----CAGCAGGTGACAG--------GGCAGGGTTACCTCTG----TGTGTTAGTTCTGAAAAAGTGAGAGGAAGTGCTGCTGCTTGGGTGCACCAAGTTTATCAAGTAACTG--------------------CAGGGGGACC-----TGTGTCT--GCATCGCTTTCTCTAGAAAGCACTGGACATATTTT------CATG-------TCTGTCTTAATAGATTG-------------------TGGAGGTGGATC--------------------TTCTTACAATTCTGTGTGTTTCTGGGCA------------------------------GTGTGCAGGGATATGATGAT--ATATAATGGGTATCCAGACAC----TTCCGGTGTTCTGCTTGCACCTTCTAACTTGCTGT-GTTTCACACTGGTTTCAG-----CAGGTCAGCTTTCTAGTCTCC--TTTATACA-------GCATGGCTT------------------------------------CAGGAAAGGCTAATA-----CCTCTGTAGTGGATTCTATTTTGTGGAGCCATTAAGTAATGCA--GTGAGCCTCAG-------------------------------TTTGGCT-TGTGTTCTTGCCTAGGAAAAACATGTACTCTGGTGGAGAAAATCTGCAGATGAATGGAGACACGCCTCATGATGGAGGACATGGAGGTGGGGGCCACGGGGACTGTGAAGAGCTGCAGAGAACCGGCAGGTCAGTAA ...:.:x..x:::.x:...................:........x..:...x....x..............:...........:..:...........:..x..:..x....................x...........:.....:...xx.........:..x..:.........-----x:....x...:.:--------:..x.:.x.:x.....----x.x.x.x..x:.:.....:x:.::x.....xxxx...:-----..:x.:..xx..x...:..xx...--------------------..::x...:.-----....:..--.:x..:.x..::..x.:x.x:::x::.:.x..x..------:...-------..x..:x.x...:....-------------------...:::..x...--------------------..:.x:x:.::.:x...:.x.....:x.------------------------------:...:..x..x..x..::x.--:..x...:.x.:xxx...x..----...::.x:x...::..----:...:x.x...xx.:-.....x.x..--...x..-----...x...---...x.x.:...--..:..x..-------.:..x.x..------------------------------------...:..:::x...:.-----:.x.:x..:x..x..::.:.:::.xxxx......:x:.:x...--:.:x:x..x..-------------------------------..x....-...xx......:...:..:..:........x........:...x.x...........:..:.....:...........x..:.....x..:..x..:.....:........::.....x....:..xx...x.x.:. 177M5D13M8D16M4D38M5I24M20D10M5D7M2D35M6D4M7D17M19D12M20D28M30D20M2D21M4D16M4I15M1D10M2I6M5D7M3I11M2D8M7D9M36D15M5D43M2D11M31D7M1D137M 496/717 69.2% 731/94230402 0.0% 236/717 32.9% 19620495 NA +13885 chr4 + 190214555 71453486 71453485 71453934 449 TCTGCCCAGGTTCTGTGGTGGACTAATTAAAGACATAAAGAGGAAAGCGCCATTTTTTGCCAGTGATTTTTATGATGCTTTAAATATTCAAGCTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTGTAACTAATGCTATCACTTTTGGAGGACTGCTTGGGGATGCCACTGACAACATGCAGGTGGGT-ATGGTTTTGAGGAGGACACAAATAGTACAGCCCAGATTGCCTTCCTCACCCCTACAGCTCAGTTAGAAGCAGATGGCCT---TTCAGTTACTCAGCGTGATTTTCTTTCTTTTGCTGGATGCTGCATTTTACTTTGCTTCTGGCCTGCTGCTGTATTTCCAGCATTTTAGTAATTATAAAAATAGCTCGATGAAATCTGGCTTGAGTCACAAGTAGGGAAAGGAAGGGAAGGAAATGAGGATATACAATTCTATTTGGGCAA chr4 + 94230402 51832091 51832090 51832520 51832091 51832090 51832520 430 TCTTTTCAGATTCTGTGGTGGCTTAATCAAAGACATAAAGAGGAAAGCACCATTCTTCGCCAGTGACTTCTATGATGCTTTAAATATTCAAGCCCTTTCAGCCATTCTTTTCATCTACCTGGCCACAGTGACCAATGCTATCACTTTTGGAGGACTGCTTGGTGATGCTACAGAAAACATGCAGGTTAGCAATAGCTTTCAGACGCA-ATGAATAAATCGGAGCTGACTTGCTTTTTGTTGTCTA-----CAGTCAGAACTGAAT--TCTGGGTACAATTAATAGAGGTA--TTGTGTACTTCCACTGAAAGCTG------GCTGTCTTTCT---CTGCTGTTGGATGGCTGTCTGTTGAAAAATTGTACCATTACCTT----AAATGGAGTTTGAAAGATGGCCAGGCAAGAGAGAAGAACTTAGTAAGGATCCTTGCTCCTATGTAGAGAA ...x::...:...........x:....:....................:.....:..:........:..:.......................:.....:..x.....:.....:..:.....x..x..:..:.............................x.....:..x..x...........x:.:-..:.:...x..:x.x.-.::....:xx.:.xx.x..:.xx...::.xx:x:...-----....:....x:::..--:..---.x..:...x.x::x..:--..x:x.x...:::...:.x....------:..x.x:....---......:..x..xx.::x.xx..x.:x....:..xx.x..x..:----....xx:.:....:xx.:::x:...x..::..:::...xxx.:.:.....x:x::x.:....x.:.:x.. 190M1I16M1D37M5D15M2D3M3I17M2D23M6D11M3D44M4D70M 293/426 68.8% 430/94230402 0.0% 27/426 6.3% 19621395 NA +10951 chr4 + 190214555 71466418 71466417 71466580 163 TAACATCTATATTTTCTTTATTTTAGGGCGTGTTGGAGAGTTTCCTGGGCACTGCTGTCTCTGGAGCCATCTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGCAGCACCGGACCTGTCCTAGTTTTTGAGAGGCTTCTATTTAATTTCAGCAAGTA chr4 + 94230402 51837273 51837272 51837435 51837273 51837272 51837435 163 TAACATCTCTTCTGTCTCTACCGCAGGGTGTGTTGGAGAGTTTTCTGGGCACAGCAGTCACCGGAGCGATATTTTGCCTTTTTGCTGGCCAGCCACTCACTATTTTAAGCAGCACGGGACCTGTCCTTGTCTTTGAACGGCTTCTCTTTAATTTCAGCAAGTA ........x.x:.x...:..::x:....:..............:........x..x...x.:.....x..x.................:..:............:.:........x...........x..:.....:x.......x................. 163M 136/163 83.4% 163/94230402 0.0% 0/163 0.0% 19629145 NA +18537 chr4 + 190214555 71472676 71472675 71472980 305 ACATTTTTCTTTCTT-------------TTTTCCAGGGACAATAATTTTGACTATTTGGAGTTTCGCCTTTGGATTGGCCTGTGGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAATACTTCACACGTTTCACGGAGGAGGGCTTTTCCTCTCTGATTAGCTTCATCTTTATCTATGATGCTTTCAAGAAGATGATCAAGCTTGCAGATTACTACCCCATCAACTCCAACTTCAAAGTGGGCTACAACACTCTCTTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAGGGCAT chr4 + 94230402 51841357 51841356 51841674 51841357 51841356 51841674 318 ATATTTTCCTTCCCTGCCACCTGTGTCTTGTTGCAGAGACAATGATTTTGACTACCTGGAGTTTCGTCTCTGGATTGGTCTTTGGTCAGCCTTCCAGTGTCTCATTCTTGTTGCTACTGATGCCAGCTTCCTGGTCAAGTACTTCACACGCTTCACCGAAGAAGGTTTCTCCTCACTTATTAGCTTCATCTTCATTTATGATGCTTTCAAGAAGATGATCAAGCTGGCAGATTATTACCCTATAAACTCCGAGTTCAAGGTGGATTATATCACACGTTATTCATGTGCCTGTGAACCACTGGGTCCAGGTAAGAGAAT .:.....:...:.:.-------------.x..x...:......:..........::..........:..:........:..x.....x.......x:.........:.x..x..:...............:....:x.:...........:.....x..:..:..:..:.....x..x..............:..:.............................x........:.....:..x......:.x.....:....::..:.x...x.x:.x...x...:......x:....:x.::......:..:.x.. 15M13I290M 244/305 80.0% 318/94230402 0.0% 13/305 4.3% 19631319 NA +13038 chr4 + 190214555 71497483 71497482 71497702 220 AATGTT-TTTCTTCTTCAGTACCATAATACTACCTTTGACTGGGCATTTTTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCCTGATATCACACTCATGTCTTTTATCCTCTTCTTGGGAACCTACACCTCTTCCATGGCTCTGAAAAAATTCAAAACTAGTCCTTATTTTCCAACCACAGTAAGTACCT chr4 + 94230402 51849275 51849274 51849492 51849275 51849274 51849492 218 AATGTTCTTTTTTCTGCAGTAC---AACACCACCATTGACTGGTCGTCTCTGACAAAGAAGGAGTGCTTGAAATACGGGGGACACCTTGTGGGCAACAACTGTGGATATGTCCCTGACATCACCCTCATGTCTTTCATCCTCTTTTTTGGCACTTATACCTGCTCCATGGCCCTGAAGAAATTCAAGACTAGTCGTTATTTTCCAACCACTGTAAGTCTCT ......-...:....x......---..:..:...x........x.:.:.:..x.:...........:.::........:...x....:..x..x.........::x.x...:.....:.....x...........:........:..x..x..:..:....x:........:.....:........:.......x...............x......x:.. 6M1I15M3D196M 176/217 81.1% 218/94230402 0.0% 4/217 1.8% 19648208 NA +3204 chr4 + 190214555 71516015 71516014 71516115 101 TTCTGTTGTTTTGTATATTCTTTCTTCCTTTCTTTTTCTCTTATTATTTGTGGTTTGGGGGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 68083545 68083544 68083644 68083545 68083544 68083644 100 TTCTTTTGGGATGCATTTTTTTTCT-CTGAGGTTGTTGTTTGGTTGGTTGTTGTTTGGGTGGCTGCTTTTTTGTTGTTGTTTTTTCTGTCTTTTTTTTAGA ....x...xxx..:..x..:.....-.:xxxx..x..x.:.x:..:x....x.......x.::.x.......x..x..x......:.x.:........x.. 25M1D75M 69/100 69.0% 100/94230402 0.0% 1/100 1.0% 3432470 NA +3211 chr4 + 190214555 71516032 71516031 71516110 79 TTCTTTCTTCCTTTCTTT---TTCTCTTATTATTTGTGGTTTGGGGGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79896005 79896004 79896086 79896005 79896004 79896086 82 TTTGTTCTTCTGCTCTTTAACCTTTCCTAGTGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTGGCTTTT ..:x......:x:.....---:.:..:..x.:.....x......xx.:..xx..xx...................xx:.... 18M3I61M 58/79 73.4% 82/94230402 0.0% 3/79 3.8% -8379973 -85850429 +9586 chr4 + 190214555 71532056 71532055 71532227 172 TTCCAGGCAAGAAAACTGATCAGTGATTTTGCCATTATCTTGTCCATTCTCATCTTTTGTGTAATAGATGCCCTAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAAGTGAGTTCAAGGTAGGTGAATGTCTATCTTTTGGTCATTCCTGGAACTCTTTTTCTTTCTTTC chr4 + 94230402 51851798 51851797 51851949 51851798 51851797 51851949 152 TTTCAGGCCAGGAAGCTCATCAGTGACTTTGCCATTATCTTATCCATTTTGATTTTCTGTGGAATAGATGCCCTGGTAGGTGTGGACACACCAAAACTAATTGTGCCAAGTGAATTCAAGGTATGTAGTTGTC--------------------AACTCATTTTGTGTCTTTC ..:.....x..:..:..x........:..............:......:.x..:..:....x............:.....:........x.......................:.........x..::x....--------------------.....x....x.x...... 133M20D19M 129/152 84.9% 152/94230402 0.0% 20/152 13.2% 19680258 NA +10639 chr4 + 190214555 71534217 71534216 71534396 180 CTTTTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAACCCCTGGTGGGTGTGCCTTGCTGCTGCTATCCCGGCTTTGTTGGTCACTATACTGATTTTCATGGACCAACAAATTACAGCTGTGATTGTAAACAGGAAAGAACATAAACTCAAGGTAAGTGT chr4 + 94230402 51852501 51852500 51852680 51852501 51852500 51852680 180 CCCTTTAAAGCCAACCAGTCCCGAGAGGGGCTGGTTTATCCCACCTTTTGGAGGGAACCCATGGTGGGTGTACCTGGCAGCAGCCATCCCTGCACTGCTGGTGACTATCCTCATCTTCATGGACCAGCAAATCACAGCCGTCATTGTCAACAGGAAGGAACACAAGCTCAAGGTGGGTGT .::...x........x.....x:.xx.:..:.....::.:.....x.......::.....x..........:...x..x..x..:.....x..x:..:....x.....x..x..:...........:.....:.....:..x.....x........:.....:..:........::.... 180M 140/180 77.8% 180/94230402 0.0% 0/180 0.0% 19681716 NA +3918 chr4 + 190214555 71537373 71537372 71537529 157 TATATATACATATGTGTGTGTATATATTATACATATATGTGTGTATATATACATATATGTGTGTGTGTGTGTATATATAGAGAGAGAGAGAAAGAGAG-------AGAGAAGCCCAAGACTAATTTATAAAAGGCCAGATAACTTTA-AACT---ACAAGTTTGCCTT chr4 + 94230402 41749096 41749095 41749258 41749096 41749095 41749258 163 TATATAAACACACATATAAGTTTATATCA-----GTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAAAGAAGAAGAGACGAAGGAAGCAGTTGCAGAGAAAGTCGCTTTCAAATGACAGTAGACGAAACAATCTAACAGCTCTGACAAGTTTGTTTT ......x...:.::.:.:x..x.....:.-----:......:....:........:....::.:x.:.:.x:..:..x...:::.....x:...::..-------......:x:.:xxx::..x.x.:.:x..:.x.:.:..::.x.-.:..---.........::.. 29M5D64M7I42M1I4M3I13M 98/152 64.5% 163/94230402 0.0% 16/152 10.5% 29788277 NA +3275 chr4 + 190214555 71537389 71537388 71537455 67 TGTGTATATATTATACATATATGTGTGTATATATACATATATGTGTGTGTGTGTGTATATATAGAGA chr4 + 94230402 43288469 43288468 43288531 43288469 43288468 43288531 63 TACGTATGTATTCAAAATATATACATGTATAAATGCATATA----TGTGTTTGTGCATATATAGAGA .::....:....xx.x......:::......x..:......----.....x....:........... 41M4D22M 50/63 79.4% 63/94230402 0.0% 4/63 6.3% 28248920 NA +3414 chr4 + 190214555 71537395 71537394 71537461 67 TATATTATACATATATGTGTGTATATATACATATATGTGTGTGTGTGTGTATATATAGAGAGAGAGA chr4 + 94230402 49681661 49681660 49681722 49681661 49681660 49681722 62 TAAGTTGTACACAT-----TTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGA ..x:..:....:..-----.x......x.:.......:..........x.:....x........... 14M5D48M 51/62 82.3% 62/94230402 0.0% 5/62 8.1% 21855734 NA +13300 chr4 + 190214555 71546335 71546334 71546543 209 TATCTCTTTCTACAGAAAGGAGCAGGGTATCACTTGGATCTCTTTTGGGTGGCCATCCTCATGGTTATATGCTCCCTCATGGCTCTTCCGTGGTATGTAGCTGCTACGGTCATCTCCATTGCTCACATCGACAGTTTGAAGATGGAGACAGAGACTTCTGCACCTGGAGAACAACCAAAGTTTCTAGGAGTGAGGTGTGTTAACTCAGA chr4 + 94230402 51856838 51856837 51857046 51856838 51856837 51857046 209 TGTCTCCCTTCACAGAAAGGTGCTGGATATCACCTGGATTTGTTCTGGGTGGCCATTCTGATGATTGTCTGCTCCTTTATGGGTCTGCCCTGGTATGTTGCTGCTACTGTGATCTCCATTGCTCATATTGACAGCTTGAAGATGGAGACTGAGACTTCAGCCCCCGGAGAACAGCCCAAGTTTTTGGGAGTGAGGTATGTCAAACCAAA .:....::.::.........x..x..:......:.....:.x..:...........:..x...:..:.x......:.:....x...x..x........x........x..x..............:..:.....:..............x........x..x..:........:..x......:.:..........:...:..x:..:. 209M 168/209 80.4% 209/94230402 0.0% 0/209 0.0% 19689497 NA +7736 chr4 + 190214555 71547574 71547573 71547752 179 TTTTGAAGG---TGAAAAGACAAGAGCATGTTTATGAAGACAAGAGGTAGATTGGTAATCTTTTGATTTGGTTTCAGGGAACAAAGAGTCACTGGAACCCTTGTGTTTATTCTGACTGGTCTGTCAGTCTTTATGGCTCCCATCTTGAAGGTAAATATGTGAAACATTCACCTCTTCCTTCT chr4 + 94230402 51858347 51858346 51858526 51858347 51858346 51858526 180 TTTTGAATGCTCTGAGAAGGGAATAAAATTGGAATTAAAGCTGAAACTATACTGCTAACCTAGTGCTTTTCTTCCAGGGAGCAGAGAGTCACTGGAGTCATTGTTTTCATTCTGACTGGTGTGTCTGTCTTTATGGCTCCTATCTTGAAGGTAAGCACAT--AACCTTTTCTTCTTCCTTCT .......x.---...:...:x..x.:x..xxxx..x..::.x::.:x..x.:..x...:..xx..x...xx..:......:..:............::.x....x..:............x....x..............:.............::.::.--...x..:x.:.......... 9M3I148M2D20M 130/177 73.4% 180/94230402 0.0% 5/177 2.8% 19689227 NA +11067 chr4 + 190214555 71555127 71555126 71556173 1047 TTTTTCCTTCTAGTTTATACCCATGCCTGTACTCTATGGTGTGTTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTGCAGGTAAGTTTTTGAATAGCAATGTAAGTACAGTAGTGTTTTTCTAGTAGTAAGAATAGTCCAGTAACAGATCTTTGAAGAAAAG-TGCTAATCATTATTAACTGCTGAGTTT---TTAAAAT------GCATTTATTTTCTACTTCACCATTCACCTGCTTTTCATTTCTGGTTTAATCAA--CAAGTTAGCCAGTATTAAGAAAAGTTGCCATACA-TACCCATTGTTTAAATAGGCTGTTA---AAAGTCATTTA---ACCAAGAAAGCAA---------GAGGCTATAATC-----------TTTCTTTTCCTTCCCCTTACCCATCTTTATCTCCTTTTTACTGTCTCAGGAAGGATACCTAACTCTTTCTGTGTGTTCTTAAAGATAGTGTTTATCCATTTGCCTTAACTCTATACTAAAAACAGGCTATTGATTTGCTTTTCACATGGCTATGATCAATAATCAAAAGTTTTTTTACCAATAAAAGAATA--AAGTCAATGTGGTTGATGTATTGCTTTTGTTGAAAACTTCAGCTATTCATAACTTTGGGAAAACTGACACACTTTTAATAAAATCATTATCAACTGGGCATGGTGGTGCACACTTTTAATCTCAGCTACTTGGGAGGCTGAGGTGAAAGGTTCACTTGAACCTGAGTTTTAGTCCAGCCTCAACAACATAGTGAGACCCTGTCTCTTTAAAAAAACCAAATCATTAGGGAGA-ACTTTGTAAGGGACTTTGTCTTTCAATTGGGTTTTAATTAAATTGGCACCAGGAAACTGGAAGTACTTATGCTGTTTTCTGGCACCTTGTTAACTGTAGCCT---TATTTAGCACTTAGTAATATTTTAATGGGAAAAGACTGCATGTCCTGTGAACATCATAAGAATTTATTTGAAC-CCCTTCAAAATAGTCCTTGCTTTTGCTTATTGAATTCAGATTAATTTGGTTTTAAAGTCAGATAGAACTGGGCAAGTGGCCAGACTACCAAAAAGAGAAAAGG chr4 + 94230402 51862505 51862504 51863393 51862505 51862504 51863393 889 TTTTCCCCCGCAGTTCATTCCTATGCCTGTGCTCTATGGTGTCTTCCTGTACATGGGTGTTGCATCCCTCAATGGCGTGCAGGTAAGCTTCCGCAGCGC---------CCAGGGCTGCTCTGGCAGCTGTGAGCAGACTCC--CCGCAGGACCTTGCCCAGAAGATGGTAATCATTAATTATTACAAGGCTTCTCTTAGGACTTTCTGGCCTTCCTCTTCTCCTCCGC----CGCCTCATTTATGTTTCCAAAGAAACCCAGGCAGGGCAGCAACTGTTTACAAATATTGCCACACACTGGCTGTTCTTGAGAATGACACTAAAGGAAAGAAATTTGCTCAGCAGGAAAGCAGCCAAGTCTTGGCCCCGTAAGCAATGAGGGGGGTCTATGTGAAGACCCGGGATCCTTCTTCACCCCCACCATACTGATACAGAGAAGA---------------GCATGTGCTTACAA---------------------------------------AGGCTCTAGGCTCACTTCTGGGATAGATTGGGTCCTCTGCTGGGACATGTGTTACAGACTGAAGAAAAACAAGAGAACATGATTTATG--------GTGGTGGCA-------TTATTC-------------------CGCAGTGTTAA------------CAAGTGGGAACATTGCTGTTTGCT----------------------------ATGGAAGG-------GAAGCCAAG------------------------------CCCCCTTTCTTT-----------GTCACTGAGGAAATATTACGTAAGGAGCCTT-TCTCACAGTGCACTATC--TTTAATTGGTGCTAGGAAGCTGGAAGTGTTTTTGTTGCTTTCTGGCACCCTATTAATTGTAGCCTTTCTTTTTAGTGCTTAGTGGTGCTCTAATGGGGAAAGACTCTGTGTTCTGTGAGCACCATGAGAGTTTATTTGGGTATTCTTTAAAAAGGCCTGGGCTTTCATTCACTGGTTTGCGATAAATCTGGTCT----------CAGAAGTGGGCAGTAAGCCCAAGTTCTGGCAAGAGACAAGG ....:..::x:....:..x..:........:...........x........:.....x..x........:.....:...........:..::.x.xx..---------x...x:x..:.:.xx:..:x..:..x.x.x...--:x:...:x.:...xxx.:...-..x.........x.x.:.:.x::.:..---...::.:------..x..:x.:....x..:.:.----.:...xx...x::....:::xxx..:.x.--..:.x:...x.x.:..x.x...x:......:...-.:x.::..x..x.:.xx.:.xx.x.---....xx....:---.x..:.......:---------.:xx.::...x.-----------.:.x.x.xxxxx...xxx.:..x....:.:.:..x::x.....x:x...::.:..---------------.::...x....x.:---------------------------------------.....x.x.::.::...:.x:x..:.x.xx.:..xx:x::::::.xx.x.x....x:.:x:.....x.--...xx..::..:..x...--------x..x..:x.-------:.....-------------------.:..x.x....------------...x....x.::x..x..:x::..----------------------------:..:....-------...x.::..------------------------------...:x.:.....-----------:...:.::...:.-.:.x:......::.:..-...:x..:.xx:x.x.:--..x......::.:.....:........::..x..:..:...........:.:....:........---.x.....::......::.::.:.......:.......x::...:......:..:...:...:........:::-::...:....x:.:.:xx.....:::.:.:..:x..xx...x...:....:.----------:....x......:xx:...x:.x.x.:::x......x.... 99M9D33M2D21M1I27M3I7M6I20M4D29M2I34M1I25M3I11M3I13M9I12M11I55M15D14M39D68M2I18M8D9M7D6M19D11M12D24M28D8M7D9M30D12M11D13M1I17M1D17M2D65M3I73M1I52M10D41M 541/843 64.2% 889/94230402 0.0% 250/843 29.7% 19692622 NA +13869 chr4 + 190214555 71557692 71557691 71557890 199 CTTTCCTCTTTCCTCCCCAGTTCATGGATCGTCTGAAGCTGCTTCTGATGCCTCTGAAGCATCAGCCTGACTTCATCTACCTGCGTCATGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTGCTATCATTTTTCCAGTAATGGTAGG chr4 + 94230402 51864255 51864254 51864453 51864255 51864254 51864453 199 CTTTTCCATTTTCCATCCAGTTCATGGATCGTCTGAAGCTGCTCTTGATGCCTCTAAAGCACCAGCCTGATTTTATCTATCTGCGTCATGTCCCGCTGCGCAGGGTCCATCTGTTCACGTTTCTGCAGGTGGTTTGCTTAGCCCTACTCTGGATTCTCAAGTCAACTGTGGCCGCTATCATATTCCCTGTCATGGTAGG ....:.:x...:.:x:...........................::..........:.....:........:..:.....:...........:..x........:.....:........x..:.........x.x..::.:.....:..:.....:...........x.....:........x..:..x..x........ 199M 165/199 82.9% 199/94230402 0.0% 0/199 0.0% 19693437 NA +15011 chr4 + 190214555 71560080 71560079 71560268 189 TTTGCTCTTTCAGATCTTGGCACTTGTAGCTGTCAGAAAAGGCATGGACTACCTCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAAAAGAAGGAGGATGAGAAGAAAAAGAAAAAGAAGAAGGGAAGTCTGGACAGTGACAATGATGATGTAAGGAACTTTCC chr4 + 94230402 51867023 51867022 51867211 51867023 51867022 51867211 189 TCTGCCTTTTCAGATCTTGGCACTTGTAGCAGTCAGAAAAGCCATGGACTACCTCTTCTCCCAGCATGACTTAAGTTTTCTTGATGACGTCATTCCAGagaaggacaagaaaaagaaagaggatgagaagaagaagaaaaagaagaagGGCAGTCTGGACAGTGACAATGAGGATGTAAGGAACTTCTC .:...::.......................x..........x........................:...:.x..:..:..x.....:...........:.................:..............:.................x....................x..............::. 189M 170/189 89.9% 189/94230402 0.0% 0/189 0.0% 19693057 NA +14652 chr4 + 190214555 71563679 71563678 71564299 621 TTTTCTCCTTAGT---------AGTATGTAAATGATTATAGAAAACGGTTTGATCGATGCTAGGAGATAGGAAGGGCTGTATAATAAAAACATTCTAAAACCTCTTGTACATTTTTTTCACAGTCTGACTGCCCATACTCAGAAAAAGTTCCAAGTATTAAAATTCCAATGGACATCATGGAACAGCAACCTTTCCTAAGCGATAGCAAACCTTCTGACAGTGAGTAGAACTAACCTCTTGCATGCTTGCTTGAATATGATTTGCACTTACAGAGAA----------AACACTTTAGAATGGCCATCTGCATTAACTTTCCCTCAATTTTG----TTTTTCCTTTTTCTATGAGAAGATTTACA-----CTTAATTATAATAAAA-----CTTTGTTTTTACATACCCT-------------AAGCTTCATTCTTCCTTTTA-----TCCA--TAAAC-----TTTTAAATTTTTATTTGGTAG-----TCTTTTCTCTT----------------------ACCCAAATCATCCCCAGTTTTTCCAAT----GGCTAAATTAATAACCATGTTTTTAATTGATTTTTCTTTTTTTTTCTGTTGGTATTGAGAATTGCAGCTTATA-ATACTACATCACTGTC-----ACTGTTTGTCTTCCTTAGGTTTTAACTAGTGATCAAAT----CAGCTCAAAAGAGAAATT----GCATCATTGGTC chr4 + 94230402 51871836 51871835 51872521 51871836 51871835 51872521 686 TTTTCTCCTAATTCCTACAGAAATTATGTGAAGGATAATA---------TTAATTTATG---GGTGACAGTAAGAGA---GCAGTGGAAATTTTCTAAGAACTTTTACACGTTTCTTTCACAGTCTGACTGCCCCTACTCAGAAAAAGTCCCAAGTATTAAAATACCAATGGACATCATGGAGCAGGAACCTTTCCTAAGTGATAGCAAACCTGCCGACAGTGAGTAGAACTAACCTCTTGCATGCCTGCGTGACTCTGACGTGCA-GTACAAAATATATATCCATTAATTTTTTAAAA---ACTTCTCTATTA----TTTCCCAAGTGTGGGGCTTTTGTTTGTTTTTA-------ACTTCCAGGTCTCTGATTTATGACAGTATTTGGCTTTGTTTTTATGTATTCTTTTTTCTTTCCAAAATTTGTGTTTTTTCTTTTGGTGCCTCCAGCTTAACTGCTTTTGTCCAGCTGTGTTTCGTGGTAACTTCCTTCCTCCTCCTCCCTGTACCTTCCCCATCCACTCAGTCCATTTCTGACCTTTGCCATTTTATGTTAAATT--TGCTGATGGTTTGCATTTATTTTTC---CTGAGTCTATTAGTCT--GGATTTGCAGCATGTCTAAACTGCATTTCTGTCTTGTTACTGTTTAT-TTCCTTAGGTTCCAAGCAGTTGCAAAACTCAGCACCTTAAAAGAATAATTAAGCATGTCATTGATC .........x.x.---------.x.....:..x...x...---------..:..:x...---..x..:..x...:.x---::.:.::...:x......:.x..:..::..:...:...................x..............:..............x.................:...x.............:............x.:..............................:...x...x.x...:x....-x....:.:x.----------..:x:....:..---x.x...x:....----.::.:...x.x..----....x::.x...:..-------.:..x..-----..x.x....:.:.:x.-----...........::..::..-------------..x:.x::..:..:.....:-----....--.x...-----..x.xx.x:.x.:...x..:.-----..:..:...:.----------------------..:..:x:...::.:::::...x.x..----x.:......--.:x:x...x...xx...x.......---:.xxx...:..:..x.--:..x.......x.:.x-.x...:...:x.....-----.......:.-...........::..x:...x::x...:----..x..:......:x....----:::......:.. 13M9I18M9D10M3D15M3D186M1D10M10I12M3D12M4D13M4I15M7D7M5I16M5I19M13I20M5I4M2I5M5I21M5I11M22I27M4I9M2D25M3D16M2D16M1I16M5I9M1D28M4I18M4I12M 429/583 73.6% 686/94230402 0.0% 141/583 24.2% 19691843 NA +6921 chr4 + 190214555 71567001 71567000 71567087 87 CAGGAGAAAGATCACCAACATTCCTTGAACGCCACACATCATGCTGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGGTAA chr4 + 94230402 51875403 51875402 51875489 51875403 51875402 51875489 87 CAGAAGAAAAATCACCAACATTCCTTGAACGCCATACGTCGTGCTGATAAAATTCCTTTTCTTCAGTCACACACTATGCCAAGGTAA ...:.....:........................:..:..:..................:..........x.:x............. 87M 78/87 89.7% 87/94230402 0.0% 0/87 0.0% 19691598 NA +41254 chr4 + 190214555 71567756 71567755 71569050 1295 ACTTACTACTTTTTTTTTTCCTTTTTCTCTAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCTGTTTGTCTTTCTTAAAACTGACATTTGTTGTTAATGTCATTTGTTTTTGTTTGGCTGTTTGTTTATTTTTTAACTTTTATTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCTCTCTGCTTCTCTCTTGCATAGACACAATCAAGACAATA---GTGCACCGTTCCTTAAAAACAGCATCTGAGGAATCCCCCT--TTTGTTCTTA----AACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAG--ACACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATTAAGGATTT--TGTAACACCTTTTATGAAAATGTTGAAGGAACTTAAA--ACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCT-TTGTCTGGTAGAACAAACCTTGACCTCCAGACAGAGTCCCT-TCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGCT-ATTTTAACTTGCTCTTGCTTGTAAATCCTAATCTTAGAGTTATCAAAAGAAGAAAAAACTGAAGGTACTTTACTCCC--TATAGAGAAACCATTGCCATCATTGTAGCAA---GTGCTGGAATGTCCCTTTTTTCCTATGCAACTTTTTTT-----AACCCTTTAATGAACTT-ATCTGTTGAGTACATTGAAGAATATTTTTCTTCCTAGATTTTGTTGTTTAAATTAT-GGGGCCTAACCTGCCAC----TTATTTTTTGTCAATTTTTAAAACTTTTTTTTAATTACTGTAAAGAAAATGAATTTTTTCCTGCAGCAGGAAAC--ATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGCTTTCTGTAAAAA----TTGTATTGTATATAATGTGATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAG-ATTAAAAACACCATGT--TTCTAAGCATCCATTTT-----------TCCCTTTCTTTAAAAGAAACTTAACTGTTCTATGAAGGAGATTGAG-------------------GGAGAAGAGACAAACTCCTATGTCATGAGAATAACCGATGTTCTGATAAT--AGTAGCATCTAGGTACAGATGCTGGTTGTATTAC-CACGTCAATGTCCTATGCAGTATTGTTAGACATTTTCTCATTTTGAAATATTTGTGTGTTTGTGTATGTG chr4 + 94230402 51876324 51876323 51877592 51876324 51876323 51877592 1269 ACTTACCTGCCTTGCCTTCCTTTTCTTCGCAGCCCTCCACGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTCGAGCCTGAAGACAATGGTTATTTCTGGAGGAGCAAGGGAACAGAAACTACTTTGTAATTTGTCTGTCTG--TTAAGTCTTAC-----------ATGGAATTTATTTT-------------------------------------------------GTCACTAGCCAAATATTACAATG--CTCTCTGCTCCCCACCTGCATAGGTAAA--TGAGACATTCTGTGCTCCCCGCTCCACCCTTACCCCCCCTGCAGACTTCCTCTTATTTATCCTCACCCGATCTTTCCACTTCGACC----AAGACTCATTTTTGCCTTCTCTGTTGCTTAGACATGCACGCATCTCAT----------TTTCAAGCAGAGGGCAGAAGTATTAAGGATATAATATAATA-CTTTTGTG-AAATGTCAGAGGAACTGGCATTACTTTAGTTGTGAATCAGtgtttgtttgtttgtttgttGTCTGGCAGAACAAAAC-TGACCTCCAGGCTAATTCAATGTCTTTATTACACTGCTCTAAGATGCTGG--AAAGTGCTGCTAATACTAACTTGCTCT------TAAAGCCTGTACTCGTAG-TAACACAGGAAGGAAAACTCAAAGGTACTTCACTCCCAGCACAGACAAACTATTGCCATCGTTGTAGCAATGTGTTTTGAAATGTCCC---TTTCCTATGCAATTTTTTTTAAAAAAACACTTTAATGGACTTAATCCGTCAGGTACATTGAAGAGTGTTATT-TTCCTAGATTATTTTGTTTAAATTATGGGGGCCTAACCTATGACTTTTTTTTTTTTTGACAATTTTTTTAACCTTTTTTTAATTACTGTAAAGAAAAATGAATTTTTCCTGCAGCAGGAAACGTATAGTTTTGAGTAGTTCTACCTCTTATTTCTAGATGCCAGGCTTTCTGTAAAGATGTCTTGTACCATATATAATGTGATTTTTAC----AAACAAGAAAAGAAACACACAATCTCCAGGACATGGCATAGGGCTGGATCAGTTTTATTAACACCTTCTACTCTAAAGCTTCTGTTTGACTTAGGGTTATTTTATTTGTTATGAATAACCTAACTTCACTATGAAGGAGATGGGATATAACTTAAATCTCTCGTGAGCAAGGAAGAGTCTTAAGTGTACTGTGGGTAAGTGAAAGACTGACTGCTGAACAGTGTCAGGGGACAGATGCTGATTGTATTCCTTTTGTTGATCTCCTACGCAGTATTGTTAGA-ATTCTTTCA-TGTGAAACATCCGTGTGTGCACGTGTGTG ......:xx::..x::..:.:...:.::x:..:.....xx........................................:..:.............:.................................x......::...:.....x--....:x..x..-----------...xx....:....-------------------------------------------------.....x:........x....::.--.........:.:.x.:.......::.x.--::.....x.x---.:x.x...:...x:xxxx..xx.x:...x:..x.:..:..--...:.:..:.----.x.....x:x.x:.x..----.x:..:x.x..:..:.x:::xx.--:.x:.....:....:x.:.:::.----------.x.:.........:::..............x.--.:...:.-.....:..-......:::.......x:x.--.......:.x..:.x.x...:..::.x.:....:.-........:........x.-..........:.x:.x..xx.-...:xx...:.xx.....xx::x:....--...........-..x:...........------....x...:xx..::x..-..x..x.:....:....x:::.........:......--:.:...x....:.........:.........---..x:..:........---............:.......-----...x........:....-...:..:::............:.:..x..-..........x.x.............-............::x..----..x.......x........xx...:........................xx:.x....................--.............................x...x..................:.----.....:::...................----.x.:.x:x.x.x...:..........:...::.x.x..x.:...x:......-x...xx......x.x.--.::x....x..::...x-----------.:::x..:x...x:.:x...:.....x:x.............x.::-------------------.::x...::.x.:x..:xx:...xx..x.::...x:..x:xx....:x::--.::..::..x:..x..........:.......x.-:x:..::..x.....:..............-...:.:...-.x.....:..::......x:::..:.... 150M2D11M11D14M49D23M2D28M2D10M3I40M2I10M4I17M4D23M2I23M10D32M2I7M1D8M1D20M2I35M1I19M1D21M1I28M2D11M1I15M6D18M1D37M2I31M3I15M3D20M5I17M1I29M1D26M1I17M4I74M2I54M4I27M4D52M1I16M2I17M11I46M19I50M2I34M1I30M1D9M1D29M 891/1193 74.7% 1269/94230402 0.0% 178/1193 14.9% 19691432 NA +26878 chr4 + 190214555 71571049 71571048 71572108 1060 CATGCACCAACCCATACAGAGTAAATCTTTT-ATCAACTGTATACTGGTGTTTAATAGAGAATGATTGTCTTC-------CGAGTTTTTTGGTTCCTTTTTTAACTGTGTTAAA-GTACTTGAAATGTATTGACTGCTGAC------------------TATATTTTAAA--AACAAAATGAAATAATTTGAGTTGTATTACAGAGGTTGACATTGTTCA-GGGATGGGACAAAGCCTTCTTCAATCCTTTTCATACTACTTAATGATTTTGG-----TGCAGGAACCTGAGATTTTCTGATTTATATTTCATGATA-----------------------------TTTCACATTTGCTCTTC--------------------------ACAGCATGAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGA---TATTTTGTAGCACCTCACTATCTGAAAGGCCATGAGTTTTCAGATGATTTCATTGAGCTTCATTGCAGCCTGAAATTTTAAAAAAGTTGTG-TAATACGCCAACCAGTCAAGTTGTGTTTTGG--CCAGAGATTT----AGATATGTCCAATT------TCCTGGCTCATTTCATTGTGCTCT-----------ATGGGTACGTATAAAAAG---------CAAGAA--------------TTCTGTT-----TCCTAGGCAAACA--TTGCAACTCAGGGCTAAAGTC--------ATCCAGTGAAACTTTTAGAGCCAGAAGTAACTTTGTCCCAGTCCTACAATGTGAAAAGAGTGAATAGTTGCCTCTTT---------TTAGCCATTTTCATGGCTGGTACATATTCGTACGCATTACTTTTC-----------AGAATCAATACGCACTTTCAGATATTCTTATTTTT----ATTCTCTTAAGTCTTTATTAACTTTGGAGAGAGAAATGATGCATCTTTTTATTTTAAATGAAGTAGATCAACATGGTGGAACAAAATGATAAAGAACAGAAAACATTTCAATATATTACTAATAACTTTTTCCA---ATATAAATCCTAAAATTCCT-ATAACATAGTATTTTACAGTTTTATGAAGCTTTCTATTGTGACTTTTATGGAATTAAGAGATGAAGAAGATGAGATATTTTAGCATTTATATTTTTCAAAATTATATGTATACTTAAAAATAAAGTAACTTTATGCATTTAT--GACTGTCAAGTGTTTCTGTT chr4 + 94230402 51879028 51879027 51880198 51879028 51879027 51880198 1171 CATATACGCACACACACATAATGCATCCTTTCATCTGCTATTACCTGGTGATT-------------TGTCTTCACAAAAATGAGGTCTTC----CACTTTTGAACCATGTTAAATGTACTTGAAATGTATTGACTGCTGATCTAGACCTTTCTCTTTTTTATTTTTTACGTTAACAGA-----------CGAGCTGTTGTACAGAGGGTAGCATTGTTTAAGGGACGGGACAAAGATTTCTGTAGTTCTCCATGTCCAA---AACAACTCTGGATGGAGACAGGAGCTGGAAATTTTTCATTTCCTGCTTCCTGACAGCAGCACTTTGTGGAAGGTTGTGTGTCCTTTCTATTTTTGTTTTCCTATACAAACATTAAACAACGACAAAGACAGCA--AGCAAGAGCTCTGCTGGCACCAAGAGATGGAAGGCAGTGAAAAGCAGCCACCTAATAGCA--------TTTGGTGGGCTG-GTGTCACCACAAGAT------GAGTTTCACTGCG--------CTTTGTAGGCCTTGTGACAATACAGCTA--AAACTAATTTTGGTTCAGAATTGGACATTTGATGAGAAAAGCCCGGATAAGCACCTCTGGCT--TCTGGGAAGGCTCTTCTGAAATCAGAAGAGTCCATTTAAAAAAAAAACACCACAAAAACTTCCCCAAACAGCTTCTCTTCGAAGTCCCACAAGAACAGCTACCAACTGAGGGCAGAAATCCTGCCATCACCCAGGGAAAACAAACGAACTGCAGACAGCTTTGTCCCAGGCCCA-----TGGAAATGGTGACGGTCTGCCTCTGTAGCCACTACTTATTTGTCGTCACGGCTGACATATATTTGTATGCATTACCTTTTTTTTTTTCCTTGGAATCAATACGCACTTTCAGATACTTTTATTATTTTTAATTCTCTTAAGTCTGTATTTGCTTTGGAGGGAAGAATAAAGAAT----TAATGTAAAATGAAGTGGATCAAGATGGTGGAACAAAACCGAAAAAAGCAGAAAACATTTCAATATATTAA----AATTTTTTCCACTAATATAAACCATGAAATTCCTTATAACATAGTATTTTACAGTTTTATGAAGCTTTCTATTGTGACTTTTATGGAATCAAAAGATGAAGATGATGAGATATTTTAGCATTTATATTTTTCAAAATTAAATGTATAC-TGAAAATAAAGTAACTTTATGCATTTATTGGAGCGTTGTGTGTTTCTGTT ...::..xx..x..:...x.:.:x...:...-...x:..:.xxx......x..-------------.......-------:...x.:..:----.x:....x...::.......-.........................:------------------...x.....x:--....:.-----------:...:...xx........x.::.......:.-....:.........x:....x:.:.:..::x::.x.x.---..::.:.:...-----x:.....:.:x..:.....:::x..:x.::...x...:.-----------------------------..::.:x....:.:.:.--------------------------......--....x..:x:.::x.........:x.::x.::x:..:.x..:x.x---:.::.x:.....--------.:..:x:...::-.x..:x:..x.x...------...:....:...:--------:...:x.::xx.....-:.....:x.x.--.:x.x.:..x..x..::.--:::..x....----...x.x.:..::x.------::......--.:.x:xx:x.....-----------.x.:..x.:.x......:---------...:..--------------....x..-----...:.x:x:....--.xx.....x.....x:..:..--------.:....x....x:xxxx..:.::x.:::.:...........x..:.-----..:...x:....xx:x:.......x.---------...x:::.:x...:.....::.:.....:...:.......:...:-----------:.......................:.:.....x..----..............x....x:........:..::...:.x.x..----.x..x.x.........:......x..............:x:x...:.:......................x----..:........---.......:.x.:........-......................................................:..:.........x....................................x........-.:..........................--..x:..::x........... 31M1I21M13D7M7I10M4D20M1I26M18I11M2I6M11D31M1I38M3D11M5I39M29I17M26I6M2D45M3I12M8D12M1D15M6D13M8D16M1I11M2D18M2I10M4I14M6I8M2D14M11I18M9I6M14I7M5I13M2I21M8I46M5D26M9I45M11I35M4I44M4D71M4D11M3I20M1I113M1D28M2I20M 727/986 73.7% 1171/94230402 0.0% 259/986 26.3% 19692021 NA +3397 chr4 + 190214555 71589449 71589448 71589567 119 TGAGTTTTTCAATTCAGTCATTGTAATCTTTATCCTCAAGATTTCAGTTTCTTTCTTTTTTATGGTTTGTATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCT chr4 + 94230402 42857352 42857351 42857458 42857352 42857351 42857458 107 TGAAGTTTTCAGCTTTAGCATTG----CTTTA-----AAAATATTTGTTTCTTT---TTCTATTTCTTGAATTTCTTTCTTTTTGTATTTTTCTGCTCTCTTTGAAATGACATTTAGCT ...:x......::.:x:x.....----.....-----..:..x.:x........---..:...xx:...x..............x.x.....:.x:.:.:.....:.:.:x:.:.x... 23M4D5M5D17M3D62M 76/107 71.0% 107/94230402 0.0% 12/107 11.2% 28732097 NA +3474 chr4 + 190214555 71589487 71589486 71589551 65 AGATTTCAGTTTCTTTCTTTTTTATGGTTTGTATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 37743668 37743667 37743732 37743668 37743667 37743732 65 AAATTTCAAATTCCATCTTTTTTGTAGTGGATATTTTTCACTCTTTTTTTTTTTTTCTTTATTTT .:......:x...:x........:.:..xx:.....:.:x..:.............:...x.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 33845819 NA +3058 chr4 + 190214555 71621989 71621988 71622035 47 GTGTATTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTGTTGTTGTT chr4 + 94230402 47840031 47840030 47840077 47840031 47840030 47840077 47 GTACATCCTCTTTTATTTTCTTTTTTTTTTTTTCTTTTGGTATTGCT ..::..::......x..................:.....x.:...:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 23781958 NA +4430 chr4 + 190214555 71683174 71683173 71683295 122 CTTTCTTCCTCTCTTCCTCTCT-TTCTCTCTTCCTCTCTCTCTTTCTTTCTCTCTCTCTCTGTCTT----CCTCTTTCTTTCGCTCTCTCTTTCTTTCCTTCTTTCTTTCTTCGTTTCTCTTTAAGA chr4 + 94230402 63697117 63697116 63697243 63697117 63697116 63697243 127 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGA ....x........:.:::.xx.-..:......::.:..:::x..::.:.x.:..xx...:......----.:.:x:.:....:.xx...:.:...::...::...........x...:.x....... 22M1I43M4I57M 82/122 67.2% 127/94230402 0.0% 5/122 4.1% 7986057 NA +3663 chr4 + 190214555 71685036 71685035 71685192 157 ACATATTATATTA--------TATTATATTATATATAATATATACTATATTATATATTGTATATTATATTATATATACATTATATAATATATATTATATGTAATATATACAATATAATATACATTATATATATTGTATATTATATTATATATACATTATATAATA chr4 + 94230402 46018787 46018786 46018938 46018787 46018786 46018938 152 ACATTTTATGTTAATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATG---------ATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGA--ATATATTA-GTCGTATGTATA-GATATGATA ....x....:...--------..:.::..xx:..x:...:xx.xx..x..::.....x......xx.:.x......:---------...x....x::..:.........x..x..........x..:...x.--:.......-:.::...:..:.-x....:... 13M8I56M9D46M2D8M1D12M1D9M 102/144 70.8% 152/94230402 0.0% 21/144 14.6% 25666249 NA +3157 chr4 + 190214555 71696785 71696784 71696878 94 CTCAAGTATTTAAGTTTGGGCTTTTACAAAATGATGAGAACGACTTTTGTTATTGTTGTTAGGTTTTTTTGTTGGTTTGTTTGTTTGTTTTTTG chr4 + 94230402 23733988 23733987 23734073 23733988 23733987 23734073 86 CTCAAACAGTGAATTT---GCTTTCAGAA-----TGACATTGGCTTTTGTTGTTGTTGTTTATTTGTTTTTTTTGTTTGTGTGTGTGTGTTTTG .....::.x.x..x..---.....:.x..-----...x.x:.:........:........x:x..x....x..x......x...x...x..... 16M3D10M5D60M 65/86 75.6% 86/94230402 0.0% 8/86 9.3% 47962797 NA +3022 chr4 + 190214555 71717407 71717406 71717455 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 18936945 NA +3608 chr4 + 190214555 71736905 71736904 71736983 79 GTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATAGCTTGAACCCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........:.::........x.xx:x...xx:...........:..x:xx:..:..... 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -4296296 -89934106 +9431 chr4 + 190214555 71765423 71765422 71765655 233 GGCACTCACTGATTAGCATATTCCTTTGGATCTTTCCTGAACGCCTCACAGATTTCATCATTTGTGGGTTCCACGTAGGTAGGGAATTCCTGTGGCTGGTGTTTCAGAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTGGTGCAGCACTCAGCAGTGCCTGGGTGAACGGGGAATGGAGAATTACTTTCACAGGACTTGGCAGACAGTGCTGAGGTCTGGAGGAGAAG chr4 + 94230402 51906876 51906875 51907108 51906876 51906875 51907108 233 GGCCCTTACCTGTCAGCAAAGTCCTTCGGGTCCTTCTTGAATGCCTCACAGAGTTCCTCATTGGAAGGCTCAACATAGTGGGGCAGCTGACGTGGTGGGTGCTCTAGGGCAGCTAGGCACAGCTTCTGCTCCAGGCCTTGGTGAAGGCAGCAGGCGGCTGTCCCCGGATGGGCAGGGAAAGGCGAGTCGGGGCTGCAGGACTTGGCTGACAGGGCTGAAGACTGTGGGAAGGG ...x..:..:x:.:....x.x.....:..:..:...:....:..........x...x.....x.x:..:..x..:...xx:..x.::.xx:....:x....:.::..:.....:.x...x.....::.:........:.xx.x::x......xx.:..x..x..:..:..::.:.....x..x..:.::xxx:::...........x.....x.....:.x...x:...:::. 233M 154/233 66.1% 233/94230402 0.0% 0/233 0.0% 19858547 NA +7257 chr4 + 190214555 71768294 71768293 71768453 160 AACCTACCCTGGTGTCATAGCAGTCAGGGTCAGCCCCTTCCGCACAGCAGGCTTCGGTCAAGGAGACAACTTCCTTCACAAGTTGGCTGACCTGTTCAAACGTGCCACTGGGAAATTTTCTACTGTACAGGACTAGTGACCTGAGGGGAAAATAAGACAA chr4 + 94230402 51907193 51907192 51907351 51907193 51907192 51907351 159 AACATACCCCAGTATCGTAGCAGGAAGGGTCAACACCATCCGCACAGCAGGTCTCTGCCAATGAGACCATCTCATGCACGAGGTGGCTGATCTCCTCGAAGGTAGCATTGGAGAACTTCCTGCTGTTCATGATGAGGGTCCTGGGAGCAAAA-ATGACAA ...x.....::..:..:......xx.......:.x..x.............::..x.:...x.....x.::..x.x...:..x.......:..x:..:..x..:x..:...::..:..:..:....x..x..:x..x.x....:.:.x....-.x..... 152M1D7M 114/159 71.7% 159/94230402 0.0% 1/159 0.6% 19861101 NA +3323 chr4 + 190214555 71788632 71788631 71788728 97 TCTGCTTGAAAAAAAGCAGAAAGGGAGAAAGAAGGAAAGA----AAGAAAGAAAAGAAAGAGAAAAAAAGAAAAAGAAAGAATGAGAAAGAAAGAAAGAAA chr4 + 94230402 58935713 58935712 58935813 58935713 58935712 58935813 101 TCTCTTTGGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAA ...x:...::..x:..x.....:x::x:.xx.......:.----:..:...:...:x....:.:x...:...:......x....x:.::....:.:..:.. 40M4I57M 63/97 64.9% 101/94230402 0.0% 4/97 4.1% 12852919 NA +3298 chr4 + 190214555 71816109 71816108 71816205 97 TATAT-ATATATACACACACACATATATATACATATATATATATACA--CACACATATATATACATATATATATACACACACATATATATACATATATAT chr4 + 94230402 29286186 29286185 29286277 29286186 29286185 29286277 92 TATATCATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTAT--------CTATTTATACGTATCTAT .....-.....:.:....:..x.x::.......x...x.x.x.....--.x....x............x.:...--------x...x.....:...x... 5M1I41M2I25M8D18M 70/89 78.7% 92/94230402 0.0% 11/89 12.4% 42529923 NA +3193 chr4 + 190214555 71816187 71816186 71816320 134 CATATATATACA----TATATATACACACACATATATATACATATATACATATATACACATATATACATATATATACATATATACATATATATACACATATATACATATATACACATATATATACATATATATACACA chr4 + 94230402 25906314 25906313 25906451 25906314 25906313 25906451 138 CATATACTCACAATCTTGAAAATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATA ......:x:...----.:x.x...:x..x....:x....x.x:...xx..x.x....x:x.:xx.x:x.x..:...:x.:.x.:....:..:..x..:.::.:..x.x...x..:.....x.:....::x......:. 12M4I122M 83/134 61.9% 138/94230402 0.0% 4/134 3.0% 45909873 NA +3569 chr4 + 190214555 71816196 71816195 71816276 81 ACATATATATACACACACATATATATACATATATACATATATACACATATATACATATATA---TACATATATACATATATATA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA .::.:.:...:.........x...:x......:....:.:.......:.:.:.x:x.x.x.---.....:x...x......... 61M3I20M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% 48568474 NA +3078 chr4 + 190214555 71816239 71816238 71816326 88 CACATATATACATATATATACATATATACATATATATACACATATATACATATATACACATATATATACATATATATACACATATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x..x:x.x.:...:....x..:..::.x......::.....x.x...:::....x.:.:::.:.....:..:::.::.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 49216058 NA +3371 chr4 + 190214555 71841030 71841029 71841100 71 TCTCCAGAAGAAAATAAAATCCAAGTTAATTTTTTGGGTCTCTCTCTCTCTCTCACACACACACACATACA chr4 + 94230402 75248018 75248017 75248088 75248018 75248017 75248088 71 TCTCAGGCACAAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ....x:.x.x.....x.xxx.x..:.x...::..:xxx.............................:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -3406988 -90823414 +3193 chr4 + 190214555 71862885 71862884 71862978 94 GTGTATATATATATATACACACACACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATAT chr4 + 94230402 54963190 54963189 54963283 54963190 54963189 54963283 94 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT ..x.:.....x:...:.x.::.....x......:.:.......xx:.::.::::x..:........x....::x.xx.x.x.x.x..:...:.. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 16899695 NA +3025 chr4 + 190214555 71862894 71862893 71862970 77 TATATATACACACACACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATAT chr4 + 94230402 74526053 74526052 74526129 74526053 74526052 74526129 77 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT .:..x..xx.x.x....xx.x..x:.:.........:..:x.:.......x.:.:...::.......:...x..x.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -2663159 -91567243 +3189 chr4 + 190214555 71862908 71862907 71862995 88 CACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x:.x:x.x.....:....x:.:.::..x......::...:.x.x....:.....x.:.:.:.:.....::..::.::.. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 49262727 NA +3008 chr4 + 190214555 71862916 71862915 71862985 70 TATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATA chr4 + 94230402 28997783 28997782 28997852 28997783 28997782 28997852 70 TGTAGTCACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATATAAATCAATA .:..xx....:.....:x.x........:...::...xx:.xx....:...:..........x..xx... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 42865133 NA +3003 chr4 + 190214555 71862961 71862960 71863013 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 48615239 NA +3076 chr4 + 190214555 71862971 71862970 71863036 66 ATATATATATATATATATATATATACACACACACACACACACATACATGTTGGCAACAGACCACCA chr4 + 94230402 50629533 50629532 50629598 50629533 50629532 50629598 66 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACATGGTGTTTATGAATGACCA .......:x......x....:..........:::.x.:.....x.....x..x:x.:::.:x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 21233438 NA +3222 chr4 + 190214555 71867280 71867279 71867337 58 TTCATTAAAAAATATATGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857599 6857598 6857656 6857599 6857598 6857656 58 TTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ...x.:..:........::..:::.::..:..x:.........x...........x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 65009681 NA +3141 chr4 + 190214555 71871710 71871709 71871768 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.:......::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -4161496 -90068906 +3017 chr4 + 190214555 71871928 71871927 71871966 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 47079302 NA +3289 chr4 + 190214555 71876472 71876471 71876573 102 CCTTCCTCCTTTCCTTCCTTCCT----TCCTTCCTTCCTTCCTTCCTTCCTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTCCT chr4 + 94230402 63998153 63998152 63998258 63998153 63998152 63998258 106 CCTTGAACTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTCT ....xxx.:.......:.:..:.----...:.........x..x:.:.:......xx:.:.:....x..:...x::.:..:x::.:..xx.::.x.:..x...:.. 23M4I79M 65/102 63.7% 106/94230402 0.0% 4/102 3.9% 7878319 NA +3459 chr4 + 190214555 71883229 71883228 71883378 150 TTTTTTCCATGGGAAGTCTTGGTTTAATGCCATTGTTTCTTGTATCCTACATGTTTTCTTCTTCCTTGCATATACTTTTATGGGAATCTATTTTATTTTATTTTCTTTTTTCCTTTTTCTCTTTCTCTCTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 35922825 35922824 35922957 35922825 35922824 35922957 133 TCTTTTCCATAAGCTGGCATGTCCTAG---CAGGGCTTCTTGCGGCTGAGATGGTTTCATCTC-------TAAACTAACATAGG-------TCTTTTCCTTTTTTTTTCCCCCTTTTTATATTTCCCCCCTTTTTTTTTTTTTCCCTGAG .:........::.xx.x.x..x::..:---..xx.:......::x.:x.x...x....x...:-------..x...xx:..:..-------.:.x..::x....:...:::.......x.x....:.:.:.............:::.... 27M3D33M7D14M7D59M 88/133 66.2% 133/94230402 0.0% 17/133 12.8% 35960404 NA +3029 chr4 + 190214555 71883339 71883338 71883394 56 TCCTTTTTCTCTTTCTCTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTG chr4 + 94230402 38525373 38525372 38525428 38525373 38525372 38525428 56 TCCCTCTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTG ...:.:....:........::.:.:.:...........::..:.x:.:.:.:.:.. 56M 39/56 69.6% 56/94230402 0.0% 0/56 0.0% 33357966 NA +3156 chr4 + 190214555 71888356 71888355 71888599 244 AAAAAAAAAAAAAAGAAAGAAAAAAGTCATCCTAATGGGAAAAGAAAAGGTAAAATTGTCTTGTGTTTGATGGCTACGTGATCTTA-----CAGATGGAAAAATCCTA---AAGACTGC---------AAAATACCGTTAGAACTAAATTCATTTATAAAATGAATACTGTTAGAACTAA---TTAATTTATTTAAATGAATTAAAATATATGAATTCTTTT--ATTAAAATGAATTCAGTAAAGGTGCAGGATACAAAATCAACA chr4 + 94230402 44043478 44043477 44043715 44043478 44043477 44043715 238 AAAAAAAGAAAAAATGAAGAAGAAAGTCAACATATCAGGAAAAAAAAATCTAAAAC-------------ACAACTATGCAAAATCAGAAATCAAGTTTAAAAAGCCTATATAAAAATGCTCTGCCTTGAAAATACAG-CAGAAATAAGC-----------ATGACTATTTTTATAATAGACCTTAGAAATATTTAATTGAAGTGGTAGATAGATGTTATTGTGAATCACAATGTATT-AACAAAGAAGCA--ATAAAATATAAACA .......:......x:.....:.......x.x..x::......:....xx.....:-------------.:::...:.::.xx.:.-----..::.xx.....x....---..:.x...---------.......x.-:....x...::-----------....x..:.x...x..:x:.---.x:.xx.......x....x.::x.x...x:x:..x..x.--..:.x....x...-.::....:x...--...x..x..x.... 56M13D17M5I17M3I8M9I9M1D11M11D20M3I39M2I13M1D12M2D14M 149/216 69.0% 238/94230402 0.0% 50/216 23.1% 27844878 NA +3444 chr4 + 190214555 71970866 71970865 71970937 72 GTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.:.........::........x.xx.x...x..........::.:..x.xx:..:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -4062340 -90168062 +3035 chr4 + 190214555 72031753 72031752 72031803 51 TTTACAAACGAGGAAACTGAGGCACAGAGAGGCTAAATCACTTGCCCAGGA chr4 + 94230402 33545654 33545653 33545704 33545654 33545653 33545704 51 TTTACAGAGGAGGAAATGGGGGCACAGAGAGGTGATATCACTTGCCTCAGA ......:.x.......:x.:............:x.x..........:x:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 38486099 NA +3981 chr4 + 190214555 72075918 72075917 72076056 139 CAAAATAATAA-AAAGTAAATCA---ATCTCTCTCTCTCTCTGTCACACACACACACACACATACACACACACACACACACACACACACACACAGAGAGAGAGAGAGGGCAGACAGCACAAGCCAAAGCAGGAAGGAACAAAG chr4 + 94230402 75248027 75248026 75248136 75248027 75248026 75248136 110 CAAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCT--------------------------------CACACACACACACACACagagagagagagagag-agagaaaaaaaaagaaagaaagaaagaaaaaag ......x..x.-...:......x---x...............x.--------------------------------...............................:.-...x.:x.x..:xx....x.:...:...x.... 11M1I11M3I18M32D33M1D33M 88/106 83.0% 110/94230402 0.0% 37/106 34.9% -3172109 -91058293 +3287 chr4 + 190214555 72075932 72075931 72075975 44 GTAAATCAATCTCTCTCTCTCTCTGTCACACACACACACACACA chr4 + 94230402 12601296 12601295 12601339 12601296 12601295 12601339 44 GTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA .....x.:x...............x........:.......... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 59474636 NA +3528 chr4 + 190214555 72080131 72080130 72080176 46 CCTGTTTTTTGTTGTTGTTGTTGTTGTTTTTTTGTTTTGTTTTTCT chr4 + 94230402 76208468 76208467 76208513 76208468 76208467 76208513 46 CCTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCT ..........x..................x.......:x....... 46M 42/46 91.3% 46/94230402 0.0% 0/46 0.0% -4128337 -90102065 +3070 chr4 + 190214555 72080135 72080134 72080182 48 TTTTTTGTTGTTGTTGTTGTTGTTTTTTTGTTTTGTTTTTCTTTTTTT chr4 + 94230402 81934683 81934682 81934730 81934683 81934682 81934730 48 TTTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTT ......................xx.....x..x..xx...:....... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -9854548 -84375854 +3705 chr4 + 190214555 72127266 72127265 72127379 114 TGCACTCCAGCCT--GGGTGACAGAGCTAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCATACAGATTCTAAATAATTTCTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59382565 59382564 59382667 59382565 59382564 59382667 103 TGCCCTCTACCCTCAGGAAAATAGAGACAGG---------AACAAAAGAAAAAAGGAAAAACAAAATAAGCAAACAGAATTAAA----TTTCTGTTCTTTTTTCTTTTTTTTTTTT ...x...:.x...--..:x:.:....x:..:---------..x....:......::.....x....x.:x..x.....x.:x..----.....x.........:............ 13M2I16M9D44M4D28M 77/101 76.2% 103/94230402 0.0% 15/101 14.9% 12744701 NA +14921 chr4 + 190214555 72128576 72128575 72128947 372 TTTATTAAGGTTCATCA-----TGAATGAGAAATGGGACACAAACTCTTCAGAAAACTGGCATCCCATCTG--GAATGTCAATGACACAAAGCATCATCTGTACTCAGATATTAATATTACCTATGTGAACTACTATCTTCACCAGCCTCAAGTGGCAGCAATCTTCATTATTTCCTACTTTCTGATCTTCTTTTTGTGCATGATGGGAAATACTGTGGTTTGCTTTATTGTAATGAGGAACAAACATATGCACACAGTCACTAATCTCTTCATCTTAAACCTGGCCATAAGTGATTTACTAGTTGGCATATTCTGCATGCCTATAACACTGCTGGACAATATTATAGCAGGTATGTTGGCTT---TTGTGCAGTTTGAAGA chr4 + 94230402 51930724 51930723 51931103 51930724 51930723 51931103 380 TCTTTTAAGGCACATCACAACATGATTAAGGAAACCTACTCAAATTCTTCATTCAATTGGC--CTCATCTGCTGAGTTATAATGGAACATACAAGTACCTCTACTTAGAAGGCAATGTCTCCTACGTGGACTTCTACCATCATCAGCCTTCAGTGGCAGCTGTTTTCATTGCCTCTTACCTCCTCATCTTCCTGCTCTGTATGGTTGGCAATGGAGTAGTCTGCTATACGGTTCTGAGGAGCAAGCATATGAGAACGGTCACAAATCTTTTCATCTTAAACCTGGCTGTCAGCGATTTACTGGTGGGAATCTTTTGCATGCCCACCACCCTCCTGGACAACATCATTGCAGGTACGCTGGTTCACATTGCACAGCAAGAAGA .:.x......:x.....-----...x.:..:..xxxx..x....:......xxx..:....--.:......--..:.xx:....:x...x.xx.x:.:..x....:...x:x:...:.:x....:...:...x...:.x...:......:x.........x:.:......:::..:...:.:..x......:.x:.x..:...:.x..x...:xx..:..:....x..:x..xx......:...:......x:x..:.....x.....:.................::.x..:........:..x..x..x..:........:.:x..x..x........:..:..x.......:.:...:.:---...::...:xx..... 17M5I39M2D8M2I290M3I16M 261/370 70.5% 380/94230402 0.0% 12/370 3.2% 20197852 NA +4915 chr4 + 190214555 72128719 72128718 72128943 225 AAGTGGCAGCAATCTTCATTATTTCCTACTTTCTGATCTTCTTTTTGTGCATGATGGGAAATACTGTGGTTTGCTTTATTGTAATGAGGAACAAACATATGCACACAGTCACTAATCTCTTCATCTTAAACCTGGCCATAAGTGATTTACTAGTTGGCATATTCTGCATGCCTATAACACTG--CTGGACAATATT------ATAGCAGGTATGTTGGCTTTTGTGCAGTTTG chr4 + 94230402 21626359 21626358 21626591 21626359 21626358 21626591 233 AGGTGCAGATAATCCTCATCTTTGCTTACTGTTCCATTATTCTGTTGGGGGTGATCGGGAACTCTCTTGTGATCCACGTGATCATCAAGTTCAAAAGCATGCGTACAGTGACCAACTTCTTCATCGCCAACCTGGCTGTGGCTGATCTGCTGGTGAATACATTGTGCTTGCCTTTCACTCTAGTTTACACACTATTGGGTGAGTGGAAACTGGGCCCGGTTTTGTGCCACTTG .:...xx:::....:....:x..x.:....x.::x..:x.::.x...x.x:....x..:..:x..x.x..xxx.:x::.x:.x..x.:.xx....x::....::.....x..:..::........x:x........::.::x....:.:..:..x:::.:...x...x.....x.x..x..:--:.:x...x....------:.:.x.:x.:x.::x.x........x::... 182M2I12M6I31M 133/225 59.1% 233/94230402 0.0% 8/225 3.6% 50502360 NA +7697 chr4 + 190214555 72138029 72138028 72138144 116 TTTCCTTTCAGGATGGCCATTTGGAAACACGATGTGCAAGATCAGTGGATTGGTCCAGGGAATATCTGTCGCAGCTTCAGTCTTTACGTTAGTTGCAATTGCTGTAGATAGGTAAG chr4 + 94230402 51931834 51931833 51931949 51931834 51931833 51931949 116 TTTCCTTCCAGGATGGCCATTTGGGAGCATGGTTTGCAAGATGAGTGGGATGGTCCAAGGAATCTCTGTCTCTGCCTCCATCTTCACTCTGGTTGCAATTGCTGTAGACAGGTAAG .......:................:.:..:.:.x........x.....:x.......:.....x......x.x..:..x:....:..x:.:.................:....... 116M 95/116 81.9% 116/94230402 0.0% 0/116 0.0% 20206195 NA +32854 chr4 + 190214555 72146973 72146972 72147814 842 TGCAGGTTCCAGTGTGTGGTCTACCCTTTTAAACCAAAGCTCACTATCAAGACAGCGTTTGTCATTATTATGATCATCTGGGTCCTAGCCATCACCATTATGTCTCCATCTGCAGTAATGTTACATGTGCAAGAAGAAAAATATTACCGAGTGAGACTCAACTCCCAGAATAAAACCAGTCCAGTCTACTGGTGCCGGGAAGACTGGCCAAATCAGGAAATGAGGAAGATCTACACCACTGTGCTGTTTGCCAACATCTACCTGGCTCCCCTCTCCCTCATTGTCATCATGTATGGAAGGATTGGAATTTCACTCTTCAGGGCTGCAGTTCCTCACACAGGCAGGAAGAACCAGGAGCAGTGGCACGTGGTGTCCAGGAAGAAGCAGAAGATCATTAAGATGCTCCTGATTGTGGCCCTGCTTTTTATTCTCTCATGGCTGCCCCTGTGGACTCTAATGATGCTCTCAGACTACGCTGACCTTTCTCCAAATGAACTGCAGATCATCAACATCTACATCTACCCTTTTGCACACTGGCTGGCATTCGGCAACAGCAGTGTCAATCCCATCATTTATGGTTTCTTCAACGAGAATTTCCGCCGTGGTTTCCAAGAAGCTTTCCAGCTCCAGCTCTGCCAAAAAAGAGCAAAGCCTATGGAAGCTTATGCCCTAAAAGCTAAAAGCCATGTGCTCATAAACACATCTAAT---CAGCTTGTCCAGGAATCTACATTTCAAAACCCT----CATGGGGAAACCTTGCTTTATAGGAAAAGT-GCTGAAAAACCCCAACAGGAATTAGTGATGGAAGAATTAAAAGAAACTACTAACAGCAGTGAGATTTAAAA chr4 + 94230402 51932506 51932505 51933353 51932506 51932505 51933353 848 TGCAGGTTTCGATGCATCGTTTATCCATTTAAGCAGAAGCTGACCACTTCAACTGCTGTCATCATTATAACAGTCATCTGGATTCTAGCCATTGCAATCATGTGTCCTTCAGCAGTCATGTTACAGGTACAAGAAGAGAAGCATATAAGAGTAATCCTTGGCTATGGCAATGAAACCCGCCCTGTATATTGGTGCCGGGAGAACTGGCCTAACCCAGGAATGAGAAAGATCTATACGACGGTTCTGTTTGCCAATATCTATCTTGCCCCCTTGTCACTCATTGTTATTATGTATGCTAGGATAGGCATTGCTCTCTTCAATACAGCAATGCCTACAGTGGGAAAGCACAGGCAGGAGCAGCGACACACTGTGTCTAAGAAGAAACAAAAAGTCATCAAAATGCTCATTATTGTGGCTTTGCTTTTCACCCTGTCCTGGCTTCCACTGTGGACTCTGATGATGCTCTCAGACTACGCCAACCTGTCAGATATCCAGCTGCAGATCATCAATATTTATATCTATCCTTTTGCCCACTGGCTGGCCTTTTTCAACAGCAGCATCAACCCCATCATCTATGGTTTCTTTAATGAAAACTTTCGCAGAGGCTTTAAGGCAGCCTTTAAACTTCAGCTCTGCTCTAAGAACATCATTCACAGGGAGGTCTACTCCCATCGAGGCCAAAGCAATGCCATTTTGCCAGCTGCCAATTACCAAACACCCCAGGATCAGGCTTGTCAAAATGTCAAGGCAGAGAGAAAACCGATTAGAAAAGGGAATTGGATGAATAA--CCAGCAGGATTTGATGATGGAGGATCTTGAAGAGCCTTACAACAACAGGATGAAGTGAAA ........:.::..::.x..:..:..x.....:.x:.....x..:.::xx:..x..xx.::.......x.:::........:.:........::.x..:....x...x..x.....x........x..:........:..::..xxxx....:.xx..:::..x:x:x...:.....x.:..x..x..:...........::.......x..:.x:.:......:........:..x..x..x...........:.....:..x..:...:.x..x........:..:.......xx.....x..x...x.x.......:x:.x...:.x...xxx:::..x.:.x.x.:x.........:.:...::x.....:.:......:..:..::....:..:......x.x........::.......:.::..x..x.....x..x...........:....................::....x..xxxx.x:x.:..............:..:..:.....:........x...........x..:xx.........::....:........:...........:..:..:..:..:...x.x..:..:x.:.x...:..:x.:..:.........:xx..:.:x::x.xx.x:.x...:.::..:x...xxx:..x:x.....x...:xx.:x.:xxx:.xx.:...---..:x:xx:......x:xx:.x.x......:x::----..x:.:....x.:x::.xx.x.:.::..x.-.x....x..--...:.....x..::.......:..x:.x:....:x..xx:....:...x:x..xx.:... 708M3I33M4I30M1I9M2D60M 570/840 67.9% 848/94230402 0.0% 10/840 1.2% 20214467 NA +3217 chr4 + 190214555 72149469 72149468 72149525 57 AATAATTGTAGAGTTTTTTGCTTATTTGTTTGTTTTTGTTTTTTTGGGTTTTTTTTT chr4 + 94230402 45439644 45439643 45439700 45439644 45439643 45439700 57 AATAATTGTGGAGTTTTTATTTTTGTTGTTTTGGTTTGATTTTTTGGATTTTTTTTT .........:........xx:..xx......xxx....x........:......... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 26709825 NA +3260 chr4 + 190214555 72162061 72162060 72162208 148 CATATATATCTCATATATATATTTCATATATATATACATATATAATATATGTTATATATAACATATATATGTTATATATATAACATATATATG---TTATATATATA-----TGAAATATATATGTTATATATATATGAAATATATATG---TTATATA chr4 + 94230402 73478949 73478948 73479098 73478949 73478948 73479098 150 CGTGTATAATATATATATATATGTCATATATGTATACTTACATAACTAATGTTATATAAATGAAA------TTCTAAATGCCCCAAATTTTTGTACTTAAGCATATGGCAATTGAAATTAATATGCTTTGT---CATAAAATATGTAAGAAATTACATA .:.:....x:x:..........x........:.....x..:....:xx..........x.xx.x.------..x..x..::xx..x..x.x..---...x::....:-----......xx.....:.x.:.---:..:......:..x.---...:... 65M6D22M3I11M5I19M3D15M3I7M 99/139 71.2% 150/94230402 0.0% 20/139 14.4% -1316888 -92913514 +3031 chr4 + 190214555 72236025 72236024 72236085 61 TGGTGACATACAGATGGGTTTTTGGTGTGGATGTCATTTCTGTTTGTTAGTTTTCCTTCCA chr4 + 94230402 34633436 34633435 34633496 34633436 34633435 34633496 61 TGGTGCTCTATAGTGGGGCTTTTTGTGTGGGTGTTATTTTTGTTTGTTTTTTCCCCTCTCA .....x:x..:..xx...:....x......:...:....:........xx..::...::.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 37602589 NA +3116 chr4 + 190214555 72243303 72243302 72243364 62 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATACATACATATATG chr4 + 94230402 79265520 79265519 79265581 79265520 79265519 79265581 62 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTG ............::........xx...:.:.:::.::::.....:.:.::..x......x.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -7022217 -87208185 +10714 chr4 + 190214555 72280904 72280903 72281362 459 GAGGAAATACACGTTTCCATTACCCCATGATGAACCTAATGATAAAATC-TAGATAGAGCCAGATGTA--------TATTTTGTTAACATTTTTATTGGTACGTGCTCTC-AGTACAACAAACAGCATCAGTAGTGTACACTTTGATAAAAAGGAATTTTTAGCTTAGTAGAAAAGAAAGCCCAAAGGTCAGAAGTATAATGAATATGTACATCTTTATGGAAACTGTTTGTGTGACCATCTTTATCTTCCCCTGTGGATGAGATGTATGCACACACAAGTAAACTAGAGAGAATTTTATTCTATGGGAATTTTTAGGAAAAAAAAAAGAC-------------TTAAGGCTTAGGGATTGTTT---TACTATCTGGAAT-TTGCCTAATTTGACCTTCAAAGTTCTTGCACAAA-GTAGCAGCAATTCTTTAGAGGTATAGAGTCAATAGTTTAAGCTGTTAGTTTACAACGATTAAAATGCAAAA chr4 + 94230402 51976973 51976972 51977404 51976973 51976972 51977404 432 GAGGATGTACATATT-CCTTCATTTTGTAAAGATTAAAATAACAAAATCACGGATCAAACCAGAAAAAAAAAGCCTTATTATCTTAAAGATTTTATTGCTACATGCTCCCCAATACAACAAACAGGATCAGTAGTGTACACTTTAATGAAAGAGAA--AGTAGCTTGGTAGAAAAGAAAGCAAAAAG-------GTACAACGATTATCTACACCCACAC---------------------------------------------TATATATATGTAGAAGATAAAGACAGAGTATTTGACTTTTTGGAAATTTCCAAGTAACAAAACACACCCTATTTGTCTGTTTGAGGCTCAGGGATTGTCTGTACAATATATTTAATACTGATTTCTTTGACCTTCAAAAGCCTTGCGGAAAGGTAGCAGCAATTCTTTAGAGGTGGTGAGTCAGTACTACAGTGGGTCAGATTATGTGCATCGCAACGTAAGA .....x:....::..-..x.:.:::::.:.x..x:xx...:.:......-::...x:.:.....x:x.--------....x.x....x:x........x...:.....:.-.:............x..................:..:...::...--xx......:..............xx....-------...:..:..x...x....:.:x:.:---------------------------------------------.:...::.:::.x...xx..xx.x....x....x.:.:.x...:.....::.:.x..x....x.x..-------------..:.....:.........:.---:.x...x.xx...-:..x:.xx.............:x:.....:x...-......................:xx......:..x.x:.:xxx..:..x...::xxx..::x..:.:..:. 15M1D33M1I18M8I34M1I45M2D29M7D25M45D67M13I20M3I13M1I34M1I71M 282/404 69.8% 432/94230402 0.0% 83/404 20.5% 20303931 NA +57104 chr4 + 190214555 72281592 72281591 72283712 2121 CTTGAAGGGAAACAAGT------CATCAAC--TTAATATCAACTACT-AAAAATGCAAGATGTTTGCA-TAACATCAAATTTGTTCAG-------TTTTAGCTTTTGAG---------------TTGGCTGTAGTAGTTT-----GCTTAAAGGTCT---CTATGCACAGAACAAAGCATGCA----TCTCTAATTATGTCT-CTCTAGTTTACCAAAA----TATGTAATTGATATTAGTGTAAATATTTAGTACATAAAAATACTATCAAGAAAAAAAATCAACTTTTAATAAATATCTTCAGTTCTGAATTCTATGTACAAGTACTTTACATCTACTCCCTGGAGAGAGCATTTCTGGCTTTGCTGTGAGCAAGGTGACTACTGACATAAATTATTAGCACATTATTGCAGTCAGATGCATTGTGGTTGTGAACATTTGAACATGAACCATA-TGGAAAATAAATATCTCAACCATC----GACATATGCTTTCTT-------GAACCTGCCTTCAAAGCC---CCAAAGCTCTACTATACTCAAATATCAATTCTAGACTGATGATATTTTTCTCAGCTACCAACATACAAATAAGTTATCCCAAAAC---------TTTTTCCTTTGCGATTATTACAGTACATTGAGTATA---------------ACTGTTTGTATCTGTCAA-CAATGCGAAAATTAAAAAAGAACACACACACACAAAAACAAAGGACACCTCAACGGTGCCTACTGAGGTCCTGGAAAGAGGGTTTCAGTTTTGTCTTGCACGAGTTCATTATTTACTATTCGTTGATCC---CTGTGACCACAAGTGTACTAAGAC------ACCAATCCTTTAAATTATAAGTATAGAAGGCAATAGGTAAGCTGATATCTGTATATCTATAGCTTTTGTGTTTCTTTTCTTTTTCTATAATTTACGTATCACATTGTTGATT----------------CAACAAAACCCTTTATATTGTCAGTAGCTGTAATTC-----------TAACTTCTC-TTTTGTAATA-CTCTGCTTTGAAAATTAACCTATAGAATGTCAAACAAGGCAATACTCAACGACAGGCACCTAGAA--CATCCAGAAATGTAATATAG-TAAACAATCATTTGAGAACACAT--CTCTTAAAA-TAATACTGATTTT-TGCAATATACAGTATTTACACAACAGCTGCAAATTTGCTCATACAATATTT-CTAATATAGATAAAT-AGGAATACAAGTCTAAG-AATTC-TTTGTTCCATATCCAAAATTTCTTGTTAAAGTGTAAACCATTGGTATCTCTTTT-------TAATTTTTAC-TGTAACTTTTCTAAAACAAA-CAAAAA--GTCAGCTGA----TATGCACAATTGGTTCCAGTCCCTTTTCTGCTTCAGAGAGCGACCAACACAATCTTAGCAACATATTTTTCT------TTTGTAATAATCTTTGGTGATTTCTTCCAATGAATTCTGGTAAATGAGTCAATGCAGAACAAAAGGAGGATGAAAGCAACTAGAAAGTGAGCCAGCACTTTCTGTTCTTC-CAATTACAGATAAAATGAGCTGACGATCTATAGAGATTTCCACTTTAAACAAGCA-TATGCACCATGG-----------GAAGAGA--------GAGGTTGTCCAGGTTTTCCTCTGGTTTCTAGCCTTTTTG----GTTCACTTTCTCATCTTTCTAAGGTGGATGATCTTGTCGGACGTCTGTTGTCAATGATCTTTCCATCTTTCTTTGAGGTTCTTGCCTGAGAAGAAGCACCTATTGAA---TCACTGGCTGCAAAGAAGGAAGCAGCAGC--------------CATTTGTGAAGCTGAACTGAGGTGGACCCTCTTGGTGGGTGGGGAGGATGGTACGGTGACCAGTCTCACAGTCTTACTTCCTGCTTGCTGAGCACTCCTCTGGCGTAAATTAGCACCATCAGGTTTACTGTTTGGCCTGAAAGCAGCATATGCATTTGGACCTCCCACTG--AAGAGATG-CTACTCAAAGACATCTTCTTTGCAGGGGTCTCTGAATGATAAGGAACCAAAGATGTAGGCATCACTAGAGATCTAGGGAGGTCACTAGGGTTAGAGATGACATCATCATGAGTTTCAGCAGCTTCTAGAAGGTATGGTGGTGGCAGGGTGCTACTGCGCTTGCTGCAGGACTCACAACATAACTTGTTATAACCTGGTATGGAGCAGTATCGTGCCAACACTTCCATTTGACAGAATATGGACTTGTCTCCCAAACATGGTTCATCTGCAAAA chr4 + 94230402 51978361 51978360 51980611 51978361 51978360 51980611 2251 CTTATGGGGAAACAAAAATTGCACATGAATATTTAATATC--CTACTTAGAAATTAAAGATGCTTGTAATAAAAAAAAAATTGTCAAAGACTTTTTTTTTATTTTTAAGAATAAGATCAACAATTTCTCTACAGTAGTTTAGTTAGCTTAAATTTCTGTTCTATCCATATGACATAGCATGTACAAGTATCTAGTTACATCTATTTTATCTTGGCAAAAAGGATAGTCAACTGCCCTTAGTGTAAATATTTAGTACATAAAA-TACTATCAAGAAT-----TCAACTTTTAATAAATATCTTTAGTTCTCAATCCTATATACAAGTACTTTACAGCAACACACAGGAGAGAGTGTGATTGGGTGGACTGTGAACAAGATGGTTATTGACATAAATTACTAGTACGTTATTGCAGTCAGATGCATTGTGCTTGTGGAGATTTTGAGGTGAACCATGCTGAAAAATAAATATCTCTCTCACCTTTAAACCAATGCTTCCAATAGGAAAAAAAATCTCTTTTAAGTCTTGCCACAGCTAT----TTCT----TCTTAGTGCTACCACTATGATGCTTTTTTAGCTTCATAAAAAACAACTGGATCGTCTGGAAAACACAACTCATTTTTGACTTGTGAATATTACAGTACTTACAGTATATACATGGTTTCCTACACCGGTCTGACCTCTTAGGCAAGAGGAGACTTAAGGGACAGCGCTGCAACTCCTAACCAAAG----------CAGTGCCTGCTCAG--TGTAGGCTGCAGGTGTCAGTGTT-CATTTCACAGGCACGTAA------AAGCATTTTTCCAACCTGTGACTGGAATTATGCTAAAATGTCTGAACCAA--CTTTTAAT-----GGACAGGTGGCAACAAGCAGACTCTTATGTTTAGAATTACA-CTTCTTTTTTTCCCCCCTCTCTTTGAAAAGAAAGCATCACATTGTTGATATTAAAGAACAATCAAACAACAAACTCTTTCCTAGTGTCAGTAGATGTAATTCATATGAAAATTGAACTTATCCTTTTATGACAACGCTGCTTAAGAAATCAATTTGTGGAATGT-AAATAAGGCAGTACTCAATGGCAGGCACCTAGCAATTGTCCAGAA-TGTAACATAGGTAAACAGTTGTCTGACAGCACAAAACTCTTAAAAATAATACTGATTTTCTGCAATATACAGTATTTACACAACAGCTGCAAATTTGCTCATACAATATCCATTTATATAGATAAATTAGCAAAACAAGTCTTATTAATTCAGTTGTTCCACTGTAAAAGTATTTTGTGTCA-TGTAAACGTTTGGTACTTCTTGTAGTGGGGTGTTTTCTACATGTGATTGTTTAAAAACAAAACAAAAATAGTGAGGTGACTACTGAGGACA--TGGCCACTTTCCCTGTACT-----AGAGCTTGACCGATGC--CTTCGGCAAC----TTTTGTGCACTGTTAGGAATATTCTTTGGTGCTTTCCTCCAACGCATTCAAGCTAAGCAGATGACACAGTATGGAAGGAGGATGGGAGCAACTAGAAAGTGAACCAGCACTTCTTGTTCTTTGTATTTACAAGGAGAATTAGTTGATGATCTGCAGTG--TCCTGCTCGTGGAAAGCAGCATGCACCGTAGTGTCCAGAAGTGAAGAAATGAAACACAAAGCGGACCAAAGCTTCTTTTTGCAACTATTCTCCATGTGGCATTCACATTC--ATCTTTCCACAGTGGAGGGCCTCGAAGGCCATCTCTTGTCAATTTGCTTCTCACTCTTCTGTGAGGTTCTTGATGGAGAAGGAGCACCCACTGTGGTGTTATTAGCTGACACCACAGGAACAGCTGCGACCAAAGCAAGGTCATTTGGA-----GGACCAAGACTGCTACTGTTGCCAGGTGGTTGGTGGAGCAAAGCAAATAGCTTGGAAGTCTTGCTT---GCCAGAGGAACTCTCCATTGTGGAAACTCAGCACCCTTGGGCTTTGTGTTTGAT---GGGGCGATGTGTGTATCTGTATCCGCTTCTGCGAAGCGAAGTCTGCCCAGGCCCCTTTTCCCTGGCAGGAACTCTGCATAGTGAGGGACTAAAGGCGTTGGCATCACCAAAGCTCTATGCAAATCACTTTGATTAAACATCACTTCCTCCTCAGTTTCAGCAGCTTCGGTAAGGAATGGTGGTGGGAGAGTGCTGCTGCGCTTGCTGCAGGACTCACAGCACAGCTTGTTGTAGCCAGGGATGGAACAGTAACGTGCAAGCACTTCCATCTGACAGAAGATAGATTTGTCTCCCATACAGGGCTCATCTGCAAAA ...:x:.........:x------...x..:--........--.....-.:....xx......:...:.-...x.xx...x....:x.:-------....x::....:..---------------..xx..::........-----.......xx...---....x..:.x:...x......:.----.x....:...::...-:.:..x:..:x.....----..xx:..:..x:x..........................-............x-----.....................:......x...:....:...............x.x..x.x.x........::.xx:...x.xx:......:....:..::..:............:...:..:.......................x.....:.x....x:.x:........:-..:..............xx:..:.----:..xx......:.xx-------:..xx.x:...:x...:.---...x....x.----.x..----.x.:.:.x...xxx:x.....::....:.x:x:.xx:..x.x....x.:::.::..:x:...x---------.....xx:...:..x...........x.xx......---------------..:.x.:xx.:..x.:.:-...x:x..:.x....:::.x.:.:.xxxx..x.xx..x.....----------.:......:..x..--:x.:.:xx.x:...x.....x..-:x..x...::.:x.:.x.------.xx.:..xx...---.......::x..x.:.:....:.:------.....--....x...-----.x.:..:x.....:.:.:.::..xx...x.x..x.x:..:.-...:.x.x....::::..:.:.:.:x..xxx.x.:..............x----------------.......x:.:..:x..x.........x........-----------x.....x..-....:.:.:.-.x......x::....:..::.:.:......-...:......:.......:.:...........x.--::.......-.....:....-......:.::.:...x.:....x--.........-.............-.................................................::-:.x............-..x..x........x.x-.....-x........:xx:x...:.x.:....xxx.-.......xx......::....x.-------.:x...:...-...:.:.x..:x........-......--..x..x...----.:x.x...--...::x.xx.....x.x..-----....xx:....:.::.--::.::.....----....x.------..x.x....x.........x....:.....:.x....x:.:x..xx..x::.::...x.:::..........::................:.........::.......:-:.x.....::x.:...x..:...:.....::..x.--.:.::..:xx::x.....-:.......:.:.-----------.....:.--------:.:.:x.x...::x:...:.:.x.:xx...x:..::x..----:.....x...--.......:.x:.....x.::..:.xx..x.:...x........xxx...::..:::....x...........x:x......:......:.:..x:---.:.:.:....xx.xx.x:.:.:....x..--------------......x:-----.:..::..::x.x:x..x...x::.....xx:.x:x:.:.x:.::.x:..::.x:x......:...---..:x.xx..:.x....x:..xx.x..x.:......x.::..:..xx......::---:::..::::.:..:..:..x.:.:x.:x...--...x..x.-..:.:..::xx.x.:...::..xx:..:x.....x..::.:...:..:....::..x........:.:..x....x.x.::.....xx.:...:.x..x..x..x..x.x...............x:x....x..........x..:.....:.......................:..:.:......:..:..x..x.....:.....x.....x.:.........:........x..:..:..........x...x..:............ 17M6I7M2I8M2D5M1I20M1I19M7I14M15I16M5I12M3I23M4I15M1I16M4I39M1D13M5D174M1I24M4I15M7I18M3I10M4D4M4D63M9I36M15I18M1I43M10D14M2D23M1D18M6D12M3I24M6I5M2D8M5D41M1D50M16I36M11I9M1I10M1I30M1D34M2I9M1D10M1I23M2I9M1I13M1I51M1I15M1I17M1I5M1I30M1D23M7I10M1I20M1I6M2I9M4I8M2D19M5D16M2D10M4D6M6I110M1I35M2D18M1I12M11I7M8I39M4I10M2D95M3I29M14I8M5D66M3D54M3D31M2I8M1I273M 1452/2047 70.9% 2251/94230402 0.0% 278/2047 13.6% 20303231 NA +3342 chr4 + 190214555 72288912 72288911 72288972 61 GACCATGCACATACACACACACACACACACACACACACACACACACACACACACACAAAGA chr4 + 94230402 23247718 23247717 23247778 23247718 23247717 23247778 61 GACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA .......::::..::........:x:.::x...:.:::.......:............:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 49041194 NA +13173 chr4 + 190214555 72290850 72290849 72291064 215 CCTACCTCACTCCAGGGTCCTGTTTTCCACTGTGCAGGGCAGGGCACTCTGTTACAGGGCCGGCGGCTCTCGGGACGGTCACCCATGCAGTATTTGCTGTGCACAGAGCGGTTGGTGCCATCAAGGAGTGGCTGAAGGCAGCGTACAGTGCGAAGCTGATAGCCAGAACTTCCACAGGTTTTGGTGCAGTGTTCCCATTCTTCTGCTACCCAGCT chr4 + 94230402 51986495 51986494 51986709 51986495 51986494 51986709 215 CCTACCTCAGACCAGGGCCCAGCTTTCCACTGTGCAGGGCATGGTACTCGGTTACACGGCCTGCGACTCTCAGGGCGATCTCCACTACAGTACTTGAAATGGACAGAGCGGTTTGCACCATCATGAAGGGGCTGAATGCAACGCACAGTGCGGATCTGGTAGCCTGAATTCCCACAGGTTTTTGTGCAGTATTCCCACTCATCTGCTGCCCACCT .........xx......:..x.:..................x..:....x......x....x...:.....:..:..:..x..xx.:.....:...xx:..x...........x.::......x.:..x.......x...:..:........:.x...:.....x...:.:...........x.......:......:..x......:....x.. 215M 171/215 79.5% 215/94230402 0.0% 0/215 0.0% 20304355 NA +10144 chr4 + 190214555 72295649 72295648 72295794 146 CTTACAGTGGATGTGTACACTCTTGAATATTGCACATTCGTCTAATAGGTTTCGGCTTTTTGTTGGCCTCACAGAAGCTGCGATGGACCATTTTATTATCACTTTTCCTACGGCATCCATATTTAGTGTACTGGAAACCTGGAAAA chr4 + 94230402 51987000 51986999 51987145 51987000 51986999 51987145 146 CTCACAGAGGCCGTGTGCATTCCTGAAGATTGCACATTCTACGAATGGGCTTTGGCTTTTTGCTGGCTTCACAGAAGCTGCGATGAACCATTTTGTTATCACTTTTCCTGCGGCACCCATATTTCGTATATTGGAACCCTGGAAAA ..:....x..x:....:..:..:....x...........xx.x...:..:..:.........:....:.................:........:..............:.....:........x..:..:.....x......... 146M 122/146 83.6% 146/94230402 0.0% 0/146 0.0% 20308649 NA +3239 chr4 + 190214555 72296547 72296546 72296612 66 TTTGTGACTATGTCACATTTGCTATATTTCTTTATATATGTGTATGTGTGTAAATATACATATAAT chr4 + 94230402 34014298 34014297 34014363 34014298 34014297 34014363 66 TTCTTGGCTATTTTCCACCTGCAATATTTCATTACATATATGTATATGTGACTATATACATCTAAT ..:x..:....x.:x..::...x.......x...:....:.....:....xxx........x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 38282249 NA +11829 chr4 + 190214555 72298270 72298269 72298445 176 TGGTTACCTCCACCACAGGGTTTGGAACACTGAGACCAGCTCTTCAAAGCCCACTCAAAAGTATCTAATTCTTCCTGGATGACATTGTTGCTGTTGATTGTAGGTACAGAGTCTTCATGGATGATGTACTTATATGTCAGGCTAGAGCGGGTATCATTTTCTTGAGGTATAATCTA chr4 + 94230402 51987878 51987877 51988053 51987878 51987877 51988053 176 TGTTTACCTCCACCACAGGGTTTGGAGCACTGTGACCAACTTTTCAACGCCCACTCAAAAGTATCTATTTCCTCCTGTAGGACGTTGTTGCTGTTGATAGTTGGTACTGAATCTTCGTGAATGATGTATTTGTAAGTCAGGCTAGATCTTGTGTCATTCTCCCGAGGAATGATCTA ..x.......................:.....x.....:..:.....x...................x...:.....x.x...:..............x..x.....x..:.....:..:........:..:..x...........x.xx..:.....:..::....x..:..... 176M 147/176 83.5% 176/94230402 0.0% 0/176 0.0% 20310392 NA +12364 chr4 + 190214555 72303907 72303906 72304145 239 TGCCACATACCAAAACAATAACAGGATCATGTAAAGGTCCATCGGTGTGAAGACTTTCAATGTCATCTTCAATGTTATAATCCCACTCCACACCAAGATCTATGAAGGTCCGCGACTTGGCTTCCTCCCCTTTGCCATTTAAAATATAATGGCCTGTAGCCTGGTTCTTAATAGCTAAAGGGA-GAAAAATGAGTAACCAGCATACATTTTATTTTATCATATTAAGTGCTGAAGATTCA chr4 + 94230402 51988600 51988599 51988839 51988600 51988599 51988839 240 TACAACCTACCAGGACAACTACTGCATCATGCAAAGGCCCATCAGTGTGCAGAGTTTCAATGTCGTCTTCTATATTGTATTCCCATTCCACACCCAGGTCGATGAAAGATCGGGATCTGGCCTCCTCCCCTTTTCCATTCAGAATATAGTGTCCTGTAGCCTGGTTCTTAATTGCTGAAGGGATTGAAAAAGAGTGACAGTTGTGCCTCTTATCATATCATCTCCAATTGTGAAGGCTTA .:.x..x.....::....:x..x.x......:.....:.....:.....x...x..........:.....x..:..:..x.....:........x..:..x.....:.x:..x..::....:...........x.....:.:......:..x....................x...:......-x:....x....:..x:x::.:.x.:....:x......x.:x.:.xx.....::.:. 183M1I56M 179/239 74.9% 240/94230402 0.0% 1/239 0.4% 20315307 NA +27586 chr4 + 190214555 72305972 72305971 72307851 1880 GACAGAAACACTTACCAAGAATATGAGGAGAAGCCTCGTCTTCTTGGATTAACACATGTCTAGCCCCAGGGGGTATATCAAACATCTTAAGGTACCCTTTG-CATGTGTAGTAAATATTGTAGGAAGCAAAGAAGAAAACAAAA-GCAACAACCATGGTTAGTTGAGCACTACATTCTTACTGCTTCTGCGTGCAGAAGAGGGCATCCATAAATTTAAAGAAGCAGTTTCGGAAATTAACT--TCAAAGCATTGGTAGCTTTTGTGACATCCAACATGAAATTAGAGGCAACTT--------TTTTTTTTATTAAAGAGGGAAAAAAGTTAATCTTGTTACCAACGTATTAGTCACTTATCTTGCGTTGAC-CTTCAAATGATGTGAAC-AACAATTCAGGCAAATACTATAC-TTTCCTGTGTCCCT-------------------------CTGTGTGATTCTAGTTTTCTAAACCATCCTTTTGAAGTGGAGTCAATTTTTAG--TGAAAGTTCACTTA----AGTTGTAAACTTTTTGGGATATGT----------TATCTGCTTACATGTTATTTTAAAAGTCTAA--------GAGGGAAGTATAGACAGCTAAACTTCTAATTATTAAAATATTTTCATATTTAAAGCCTTCTTTATTCTAAAGGAGTTACAACAGAAAAATCAGTGCTTTCATTTTTCTTGTGATCAGTATTAATTTTAAAGCTTTAGGCAAGTTTTATGATGGGACTATTTTAACCAAATCGACAACATGGATTTTAAACCACTTAGTTGGAAAATGTGTGCAAGATGTGTTATGCATTGCCTTTATATGCACCCTAACCTCAAAACCTCCTAAGCCAGAAATAAGAAAATCAATATGCTTAATAGGTTGCTTTGTGTTTTAAAATCATATATCATTCCTATTACTGTAAATGTCATAT--ATCACATACTATGTTGAT--------ACTATCACATGTCCTAAAAATTATCTTACAATCATTTAGAATTAAGATTATGACCATAAA--TCATAAATATTATGACCTGACAATAGTCAGGTCAATTAGAACAGATGTTATACATCTCATTATCATACAAATAAATGAATATAAAATGATTATGTAACCTACACCTTCAATACATTATGAAACATCCAATACATATTC---TATGGAGAATATTAACAGAAATCCAGTTATCAATCCACAATTATTGATGAAATAAGAAAAAACAAGTGTTTTTGTCATTTGTATATGTATAATAATATACACCTATGAATAGATTTACCTAAGTTTTTC---ACAATATTTATTAGTGTCCTAACTAAATAAAGTGGTCCTTTTGGGATCAGGGTGTTCAGCACTTTAGCCTGGGGTAAAGTCTAACACATGAAATGTACCATGTTTGCCTGAGTACACAGTGGCTAAAAGGAACATGCTTAAGATGCCAAGTACAGCAAAACAGCTT--GATGCCATTTATGGATGCCCATCTTTCTGCAGTTTGCTACAACTTACCCAGTACGTTTTTAGCTTCTCTTGTTTCAGCAAGAGAAATATTACGAGCTCCTTTGGGTAAAGTGAAAGCGCCTCTTGTCTTCCCTTAAATAGAATGTCTTTAATTAGTGGAGGGTTCATGTTTATCAAAGTCTTGTTGTTTCATTGACTATCCCATAAGTCACATATTTTATTAGGCAAGTTATAAAATATGTTCTGTAAGTTTATGTGTTGAAGTCACAATGCATTTGTAA------TAGATAATGCCAATAAACTGTTAATAGTCAATGAAAGTAAGACTAAGCATGAAAGTAAGACTAAGTAGATGATTTGAAGTTGAATACTTGCAGATTTCATTTTCCAGCAACTTCAATTCTTTATGGCACCTCTTGCTTAAATGTTTTCCTGTTGGAAAAGGTTAATTAGTCTATTAAATCACTATGATGACAATATTAGTGCAAA chr4 + 94230402 51990359 51990358 51992012 51990359 51990358 51992012 1654 GAGGGAGGAACTTACCAAGAAAATGAGGAGAAGCCTCGTCTTCTTGGATAAACACATGTCGAGCACCAGGAGGGATGTCAAACATCTTAAGGTACCCTTTGGCATGTGTAGTAGTCAATGGAGAAAGCAGAGGAGGAAATAAAAAGTAATAGCCATGGTTAGGAGCACTCTACATTATC-TAGCTTCTACTTGCAGAAGGGGGCATCCACCAACT--GAGAAGCAGTGTCAGAAAGAAACTGATCAAA-------TAGCTTT-GTAACGT----------ATTTGACAGGACCTCCTTGTGTTTTTCCTCTTTCCAGAAGTAAAGAG---AAACCAGTTACAAATCTATTTGTCTCTTCGTTAGCTATACCGCTATAGGTCATATTAATTAACAATTCAGGCAAAAAAAATATGTTTCCAATGTTTCTGAGTATACAAGGGAGAAGAACGATTCTTCCTGATTATTTTTTTCCAAATCACTCATC--------AGCCAGGCTGTAGGATTTCAGTTTACTTACTGTAATGATACAC--------ATATGTCTCTTCAGTGTGTCTGTTTAC------TTTTGAGACACCAATGATTCTGGAGAAAGGTGGATGTAGTAAATTGTACTGTCACTATA-------CGTAAGGAAGGGCTTGTCTAC---ATGGAAGTTAATCCAAACAGTTTAAAACTACAAAT------GTAAAATGCATTAATT-------------CAAGTATTA--------CTGCTGAAACGAAAGGGCTGAATTCAACTCTATACAATTAAGAATAAAAA------------------------GCTCTT-----------------------CCCAAAGACAGTAAT------------------------TTGTTTTAAATTTCAA--TTATTTATCAGTCTAAATA--ATTAGTGTAATGTTCAGCATGTACTACTGTCATTCAGGAAGACTAAAATCCATCTTGAGAACCTGTCAGCAGTCACTTCTATTGCAAGTTTTAAACAAGAGCTTCACAAGCA-------CTGAAGAGAATCTAATTAATTTGATGTAAGGATGCAAATCTC-----------------TGAGTGTA---------------CGGCACTTTCA-TAT-TTCTGTATTTTCCCTTTAATGTCCGTGTATTCAG----TTAAGACGAATCTCCTTG--GATCCA---TTTTTAAAGAATGAAGAG--------------------CTACATATGTGTAATG-------TCTGGGACTTGGCTGGTGAGAGTCTGCAGAAACAGCATTTGATGATCTTTTTCCTGACCA-------TCTTTTGAGCATATGAAACACAAAGCTTTTGCCTGATTTGGAGT-----------AATGTGTCAA---TGCCT-------------------------TGTTGGAGATTAGAACTGCAGCAAGAACTCTCCAGTTGCCAT----GGATGCC--TCTTTCTGCAAGC-ACTTGAACTTACCCAGAGTATTTTTAGACTCCTTTGTTTCAGAAAGGGAAATATTGCGAGCTCCTTTGGGCAATGTAAATGCTCCTCTCGTCTTCCCTTAAATAGAACGTCTGTAATTAGTG------TTATGGG-AGCCAAGTCTCATTATTTCATTGACTACATTGTCAGCCAGATGGTCT-----------TAACAAATACGAAGTATAA-TTTACGTTATGTATTCA-AATGCACTTGAAGCAGCATTAGACACATCCAGCAAATT-TTAATAGTCAATGAAATTTAGACCAG---TGAAAAT----TCAGGTAGGTGATTTTAAGTTGGATACTTGCAGATTTCATTTTCCAGAAACTTGAATTCTTTTTGGCACCTCTTGCTTAAATGTTTTCCTGTTGGAAGAGGTCAATTAGTCTTTTTAATGACTAGACTGACACAGATACTGTAAA ..x:..::x............x...........................x..........x...x.....:..x..:........................-...........:x:.x..x..:.....:..:..:...:....-.:..:.:..........xx.x:.x.......x.:-:x......:.x........:.........:x..:.--:.........x..:....xx....--.....-------.......-..:..:.----------...x..x:x:..:.--------....::.:x..xx...:.x...:.:---..x.:x.....x..:x....x...x...xx:.x..xx.:x.-..x:.::.x..:.x..:-...............x.xx...:-.....x:...::..-------------------------..x:x.....x.xx.....:...:..::.x.:--------..:..:x:.x...--.xxx....:.....----.:.x:..x..--------......----------.:....:....------....:.:.xx.:..--------...::.:..:x.x::..:x..x:x.x:x:.:.:..x.-------.:..xxx..:.x...x.:..:---.x:.:.....xxx..:.x.:x.:.:x:..x:x.x.------..:.xxx.:.......-------------.....x...--------..::.xx...x...xx.x::.xx.x:.:.:..x..x.:.x..xxx:....------------------------..::..-----------------------:..x...x...x...------------------------...:...:x:...:..--.:..x.....x..:x.x..--:.x.:...x..:.--.x..::.....:xx.x..--------....xx.:x::..:.:.:..::xx::x:..:...:..xx.x.xx.::..x.:.x..x:.:--...:..::.-------....x:.x.:..x::.:....x..xxx:.x.x.::.x.....-----------------...:.:..---------------.x:...:....-..:-..x..x.x:x...xx.xx..:.:.---...xx..----....x.x:....:xx..:--:.....---..x..:.x...xx....:--------------------:.::......:....:-------:..:x..x.x.::.x::xx:...:.x:x---...::....:x.::.x.::.xx..:.x:.-------:......:.xx:.x.:x::x..:x:....x.....:xx.::...-----------.....::..x---.....-------------------------..:.x:....xxx..x.:......:.xxx..:--.x......----.......--..........:x:-:..xx...........x:::.......x:..::.........x...:........:..............:..x..:..x..x.....:..................:....x.........------.:...xx-.x.x......::..:............:x:::.x..:..x..:x.:.-----------..xx.....:.xxx.:...-....:..xx..x.x...-......:...x.:------....:.xxx...::...:.-................x.x....:.:---.....:.----::.:....:......x......:........................x.....x........x..................................:....:.........x..x...x....x:x.....xx:x..x..:... 101M1I42M1I34M1D35M2D24M2I5M7D7M1D7M10D14M8I25M3D41M1I17M1I23M1I14M25I32M8D13M2I14M4I10M8D6M10I11M6D14M8I37M7D21M3D35M6D16M13D9M8D50M24D6M23D15M24D16M2D19M2D13M2I18M8I60M2I9M7D42M17D8M15D11M1D3M1D24M3I7M4D18M2D6M3D18M20D16M7D28M3I29M7D44M11D10M3D5M25D32M2I8M4D7M2D13M1D122M6D7M1D47M11D19M1D17M1D13M6I19M1D26M3D7M4D145M 1078/1564 68.9% 1654/94230402 0.0% 406/1564 26.0% 20315613 NA +10588 chr4 + 190214555 72309289 72309288 72309534 246 AAATTTTGATTATGTTTATAGAGAAAATGCTGCATTTCTAAAGGAAGAAGCCTCAAAAAGTACAA--ATCACAGAGA--------AGAATA----------CTAAATCCATGAGAGACCTCATCTTACCAAGCTTCCTGGGAGTTCTGGTAAATGTCCCCTTCACGGTTCGGCAGTGGGAATTATCTCCTCCACAGACACCACACTTATCCTCAACCTTATTAGAACCAATTTCTTTATCACAGCCCACTTTCTGGAGAGAGAAGA chr4 + 94230402 51993787 51993786 51994048 51993787 51993786 51994048 262 AAATTTTTGTTTTGCTACCTGGAAGTAAGCCACGTTTCT----GATCAGTCTTCAAAAACAATAAGCATGACAGAAACATGTGAGATAATAGAAACTATATTCAGATGCATAAATTTGCTATTCCTACCAAGCTTTTTGGGAGTGCGGGTAAAGGTTCCTTTCACAGTTCGGCAATGGGAGTTATCTCCACCACAGACACCACACTTATCTTCAGCCTTATTGGAACCAATTTCCTTGTCACAACCCACTTTCTGCAGAATGAAGA .......x:..x..:.xx:x.::.:x.x..::.:.....----..xx.:x.:.......xx.:..--..x.....:.--------.x....----------::.:..x...:.:xxxx..xx..:..........::.......x.x......x..:..:.....:........:.....:........x....................:...:.......:...........:..:.....:...........x...:x..... 39M4D22M2I10M8I6M10I165M 182/242 75.2% 262/94230402 0.0% 24/242 9.9% 20315502 NA +10518 chr4 + 190214555 72311028 72311027 72311227 200 GGGAAGCAATTTGAACTTACCACACACTCTCCTCGCACACATATGCTATATGGATCTTTGTAAGAACAGTGCGTTCCATCATGCACCAGTTGTTTCATGTAAGCAACATCTCCAGTCTCCTTGGACTGACAGTAAAGGTGGCATCTTTTCTTGGCTGCATAAGATGGAGGATAAAATTAACTATTTACATAAAATGGAAT chr4 + 94230402 51994527 51994526 51994722 51994527 51994526 51994722 196 GGGAAGCTGTC---ACTCACCACACATTCTCCACGAACACAAATGCTGTAGGGATCTTTATATGAACAGCGAGTCCCATCATGTGCCAATTGTTTCATATAAGCAACATCTCCTGTTTCTTTGGATTGGCAGTACAGGTGGCATCTCTTATTAGCTGCATAGCA-GGAAAACAGACGTAACTGCATAAGTTAAAAGCAAT .......x:.:---...:........:.....x..x.....x.....:..x........:..x......:.x..:........::...:.........:..............x..:..:.....:..:.....x...........:..x..:........:x.-...::.:.:.xx.....::x..x:.x...x.x... 11M3D150M1D35M 152/196 77.6% 196/94230402 0.0% 4/196 2.0% 20316501 NA +13368 chr4 + 190214555 72312285 72312284 72312490 206 ACTCACGGTCAGGATGTTCATATGGCAACCAGTGGTGTTTGGTATTCTGGTATTCAAAGTGGGAGTTTCGCTGCTGACACTGCTGTGCTCTGAAGTCCTCAAAGTGTTTTTGGCATTCTTCTGTGTTACAAAGCTGGTACTCAAAATTAACACCAGGACAATCCTGACCACCATTGATGGGCCTAAAGAAAAGACAACATTTAAAA chr4 + 94230402 51995809 51995808 51996013 51995809 51995808 51996013 205 ACTTACAGTCAGGGTGTTCATATGGCAGCCAGTGGTGTTTGCTGTTCTGATACTCAAAGTGGGAATTGCGTTGTTGACACTGCTGTGCTCTGAAGTCCTCAAAGTGCTTCGGACACTCTTCAGTATTGCAGAGTTGAAACTCAAAATTGACACCAGCACAGTCTTCACCTCCATTAATTGGCCT-ATGAAAAGAAAACATCTGAGA ...:..:......:.............:.............x.:.....:..:...........:..x..:..:................................:..:x.:..:.....x..:..:..:..:..:x..........:.......x...:..:.x...x.....:..x.....-.x.......x.....:.:.:. 184M1D21M 168/205 82.0% 205/94230402 0.0% 1/205 0.5% 20316476 NA +11128 chr4 + 190214555 72313671 72313670 72313832 162 ACTCACATGGGATTATTGCACTGGCGTGTTCTGAAACGAACACCAGTTCCACATGTCCGAGAACAGGAGCCAAATTTAGTCCATGACCCCCAATTGCCATCTTGTTTTTGCTGATTAGCATTCTTCCACATGCAATGACCCTTATAGCACCACTTAGAAAAA chr4 + 94230402 51996552 51996551 51996713 51996552 51996551 51996713 162 ACCTACATTGGATTGTTGCACTGACGCGTTCGGAAGCGAACTCCAGTTCCACAGGTTCGTGAGCAGGAGCCAAATTTTGTCCAGGGTCCCCAGTTGCCATCCTGCTTCAGCTGGTTAGCATTCTTCCACATGCAGTGACCTTTGTAGCACCACTGAGAGAAA ..::....x.....:........:..:....x...:.....x...........x..:..x..:..............x.....x.::.....:........:..:..:x....:....................:.....:..:..........x...:... 162M 134/162 82.7% 162/94230402 0.0% 0/162 0.0% 20317119 NA +10040 chr4 + 190214555 72315768 72315767 72315982 215 GTGCAGCTGTGTTTACCATTTTCCAG---ACCTTTAAAGATGATAATTATGCAACATATCTTACATATTTATTGTGTAAATAGATA-TACTCACTTTTCCAGCAGCACATTCAGTCCCATCAAGTGGAGGTCCCTTTTTAGTCTTACAAAAGTAGGGATTATCAGGATGGCTACACCACAGCTGTTTACATGGGTCAAAGGTTCGGAACTGGAAGATAG chr4 + 94230402 51997547 51997546 51997753 51997547 51997546 51997753 207 GTGCAATTGT-----CTATTTTCCTGTGTGCTTTTCAACCCAA-ATTAATGCAACTGATTGTGTTTATTTTT------AATACATGGTACTCACTTTTCCAGGGGCACATTCTGTCCCATCGAGTGGAGGTCCTTTCTTAGTCTTACAGAAATACGGGTTATCTGGATGGCTACACCACAACTGCTTGCATGGGTCAAAGGTTCGGAACTGAAATGCAG .....::...-----.:.......x.---:.:...x..xx::.-.x.x.......xx..:x.::x.....x.------....x..:-...............x:........x........:...........:..:...........:..:..x..:.....x................:...:..:.......................:..x::.. 10M5D11M3I14M1D28M6D8M1I132M 162/203 79.8% 207/94230402 0.0% 16/203 7.9% 20318221 NA +3396 chr4 + 190214555 72316548 72316547 72316680 133 CATGTTGGTGCATGCCTCTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCCAGGATGTGGAGGTTGCAGTGAGCCGAGATCAAGCCACTGTAC-CCTCCAGCCTG----------AGTGACAACAGTGAG chr4 + 94230402 76033197 76033196 76033337 76033197 76033196 76033337 141 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAG ..::x.......:.--.x..:.............::........x.xx.x...x.:..x........:.xx.xx:..:..:..-:.xx:..x::.....x:x...::-..::x......----------:.....x:...x... 14M2D67M1D23M1I11M10I15M 88/130 67.7% 141/94230402 0.0% 14/130 10.8% -3716649 -90513753 +11442 chr4 + 190214555 72318566 72318565 72318715 150 ACATACCGCGGTGCACATTTTATAGCCAACACCAAAATCAAAACGACATTGCTCATCCATAGAATAATTGATTCCAGGAAGTTCTGGGAGTTTAGGCCAATCATGATCAAAAGGGTCATCAAGGAGACAGTCATAGGAACTGTAGGAAGA chr4 + 94230402 51998019 51998018 51998168 51998019 51998018 51998168 150 ACATACCGCTGTGCACATTTTATAGCCAACACCAAAATCAAAGCGGCACTGTTCATCCATGGAATAATTGATGCCTGGCAGTTCAGGGAGCTTGGGCCAATCATGTTCAAAAGGGTCATCAAGAAGACAGTCATAAGAGCTGTGGAAAGA .........x................................:..:..:..:........:...........x..x..x.....x.....:..:...........x.................:...........:..:....:.:.... 150M 132/150 88.0% 150/94230402 0.0% 0/150 0.0% 20320547 NA +11387 chr4 + 190214555 72319329 72319328 72319487 159 TACTGGATATATCTTTTCAGTTCTTGACCACTGCATCGGGACCAGTGGTAACGATGGAATGCTGCTTGTACCAAGGGAGCCATGACACTTCCCATAGCAGTCTCATCACCACACCTGTTGCCTTGTCCATCATGCTCCATTCCCAACCTAGAACACAAA chr4 + 94230402 51999445 51999444 51999603 51999445 51999444 51999603 159 TACTGTATATATCTTTTGAGTTCTTGGCCACTGCATCTGGACCAGTGGTAACGATGAAAGGCAGCCTGCACCAAGGGAGCCATAACACTCCCCATTGCTGTCTCATCCCCACATCTGTTCCCTTGCCCATCGTGCTCCATTCCCAGCCTGAAACAAAGA .....x...........x........:..........x..................:..x..x..:..:..............:.....:.....x..x........x.....:.....x.....:.....:.............:...::....x.:. 159M 136/159 85.5% 159/94230402 0.0% 0/159 0.0% 20319884 NA +8140 chr4 + 190214555 72319851 72319850 72319980 130 GACTTACACATGGCCCGTTTCATGGGCTACTACAAAAGCAGATGAAAAACCATCCTCATGATTCAGGGTACAACTTCTCACTGGATGACACATGCCGGTGACTGGAGCATATCCTGTAGAGAATAACAAT chr4 + 94230402 52000532 52000531 52000661 52000532 52000531 52000661 130 GACTTACACGTGACCAGTTTCATGAGCAACAACAAAAGCTGATGAAAACCCATCCTCATGGTTGAGAGTACAGCTTCGGACCGGGTGACACATGCCAGTAACAGGAGCATATCCTATTGAGAGAAATCAT .........:..:..x........:..x..x........x........x...........:..x..:.....:....xx..:..:...........:..:..x............:.x....:x..:x.. 130M 105/130 80.8% 130/94230402 0.0% 0/130 0.0% 20319319 NA +11803 chr4 + 190214555 72320686 72320685 72320897 212 TATTTCTTCTACATATTGACAGCAATACCTTGCATTCCAGCAGGTCCAAAGTCTTGCCTGGTTAAAAAAATTGCATGGTCATGGTGTTCAGAGTGGTTGAGATCAGATCTTTGCTGTTGGGACGCCCAGCGACACACATTCTCCAAGCTTCTGGATGGGTTTCCCCTTTCTATGAGGCTGATGGACTAAGTGAAAACAATATGTTAAAGACA chr4 + 94230402 52002708 52002707 52002917 52002708 52002707 52002917 210 TACTTTTGCTCCAGGTCAGCTGCATTACCTTGCATACCAGCAGGCCCAAAATCTTGCCTAGTCAAGAAGATGGCATGATCATGGTGCTCAGAGTGATTGGGGTCTGACTTCTGCTGCTGGTACGCCCAGCGGCAAACATTCTCCAGGCTTCTCGAGGGATTCCCCCTTTCAATCAAGCTAATGGACTGA--AAAAGCAAAGTATTAGAACCA ..:..:.x..x..x:.:::.x...x..........x........:.....:........:..:..:..:..x.....:........:........:...:.:..x..::.:.....:...x..........:..x..........:......x..x..:..:........x..x.:...:.......:.--:...:...x:.:...:.:x.. 189M2D21M 160/210 76.2% 210/94230402 0.0% 2/210 1.0% 20317978 NA +6813 chr4 + 190214555 72323010 72323009 72323145 136 TTACCTTTGCATATCCCAGCATTATCATGCGCACCAGGACCACATTTATATGCACTCCGAGGGACTCATCATGGTAAATTTCATTCACCT-AGCAACAAAAAAAGATAATTGCTAAAAGAAAGGAAACACCGAGGAT chr4 + 94230402 52004489 52004488 52004623 52004489 52004488 52004623 135 TTACCTTTGCATACCCCAGCATGATCATTCGGACCAGCACAACATTTATGTGAACGCCCAAGGATTCATCGTGGTAAATTTCATTCACCTGAGAAAATAAGAAGGAAAACT--TAAAAAGAAATAATCATGGATGAT .............:........x.....x..x.....x..x........:..x..x..x.:...:.....:...................-..x..xx..:..:..x..:.--.....::..:x..x..:x..x... 90M1I20M2D24M 106/134 79.1% 135/94230402 0.0% 3/134 2.2% 20318521 NA +3115 chr4 + 190214555 72324556 72324555 72324597 42 TTTATACATATATACACATGCACATGCACACACACATGTACT chr4 + 94230402 43671853 43671852 43671894 43671853 43671852 43671894 42 TCTATACATGTATACACATGCACACACACAAACACATGCACT .:.......:..............::....x.......:... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 28652703 NA +3209 chr4 + 190214555 72333759 72333758 72333859 101 TTTTACTTTAAGTCTCAATTTAATAATCAATTCCTGAAAGAAGGTTTTCTTTTTTGTTGTTTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTT chr4 + 94230402 28945642 28945641 28945718 28945642 28945641 28945718 77 TTTCACTTTAGGTTTCATT------------------------GCCTTTTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTCTCCT ...:......:..:...x.------------------------.::..:....x...xxx...............xx........:...:......:.::. 19M24D58M 59/77 76.6% 77/94230402 0.0% 24/77 31.2% 43388117 NA +3370 chr4 + 190214555 72333803 72333802 72333864 62 TTTTCTTTTTTGTTGTTTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTT chr4 + 94230402 73452901 73452900 73452962 73452901 73452900 73452962 62 TCTGCTTTCTTCTGTTTTTGTTGTTGTTGTTTGTTTGATTGATTGATTTGTTTTGCTTTCTT .:.x....:..x.xx......................x...x...x...x....x:...:.. 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% -1119098 -93111304 +3121 chr4 + 190214555 72333804 72333803 72333889 86 TTTCTTTTTTGTTGTTTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTTG chr4 + 94230402 48450042 48450041 48450114 48450042 48450041 48450114 73 TTTCTTTCACATT------TTGTTCTTGTCAGTAGGTTTGCTTGCTTTTTTTTTTTTTTTTCTTACAA-------TTGTGCTGTTG .......:x::..------.....x....:x..xx..........................:..:x:.-------...:x...... 13M6D49M7D11M 58/73 79.5% 73/94230402 0.0% 13/73 17.8% 23883762 NA +3134 chr4 + 190214555 72333826 72333825 72333868 43 TTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 79896038 79896037 79896080 79896038 79896037 79896080 43 TTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTG ..........x...x...x...x.................... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -7562212 -86668190 +12279 chr4 + 190214555 72339487 72339486 72339712 226 TACTCACAATGTTCATTAGGGTCAGGAGGTAGTTTTGGACGTGCTCTTTGCCATGGAAACGGACCACAGAGTCATCCACTCCCAGCAGTACCTCGATATTGTAATCGTTTTCTCCCGCGTGTCTGCGGCGTCTCATTGTTTCATTCAGCTGCTGGTGGATGTTGCCATAAACAGTACCTAGATCATCAAGGCCTTCCAGGTCCGACTCTAATAAGAGACAAAAGGA chr4 + 94230402 52015908 52015907 52016133 52015908 52015907 52016133 226 TACTCACTATGTTCATGAGGGTGAGGAGGTAGTTTTGAACATGTTCTTTGCCATGGAACCGGACGACAGAGTCGTCCACACCTAGCAGCACCTCAATGTTGTAGTCGTCATCTCCTGCGTGCCTGCGTCGCCTCAGGGTTTCATTCAGTTGCTGTTCTACACTGCTGTACAGGGAACTCAGGTCTCCAAGGCCCCCAAGAAGAGATTCTACAATGAAACAGTAAGA .......x........x.....x..............:..:..:..............x.....x........:.....x..:.....:.....:..:.....:....:x.....:.....:.....x..:....xx...........:.....x.xx.:::...::..x.x:.x..::..:..x:.......::.x..:xxx..:....xx.x..:...:x.:.. 226M 170/226 75.2% 226/94230402 0.0% 0/226 0.0% 20323579 NA +14779 chr4 + 190214555 72341288 72341287 72341830 543 TACTTTAATTCACTTTGACCTAAGCCCAACTGCTAGCTCA-TTAGCTGGGAAAATTCTCCTCACCAAGGAATTACATTGGCTCC--ACAATATATAAATAACTCTCACCATCATCCACATCAAACAGAAAGCTT-TCCTCAAAAGTTTTCAAGAGCTGCAAACCCTCACTGAGGTTAAGAGACGACTACACCTGCAAATAGCTTTACCATTCAACCTCAAGTCTTTTTCACACACTTA-GAATGTGAAAGGCTGTGATAGCTAGTGTACAAATATAGGAAATTCAGACATGAGCTCTCAATTCTAAAAATGGCTCCTGTTGGCAGAA-TGCTCAGAGAAAAC-GTCCAATGGAAATATACCAGCAATGTTATTATATCATGAAGCTTGATGTGTGAATGAAGTAGGCTGAATACTTATTTCAGAGAG-----GCAGTTCATTCTGCTTTAACACACCTTTGGTTTGGCCTTTGCAAGCCTCTTTAAATAGGTAGTTTTCTGGT-----AAGGAAACAGAATCTCTCTTTTTAT-TGCATAAGAAACCTGGGAAAGAAGAAG chr4 + 94230402 52017344 52017343 52017877 52017344 52017343 52017877 534 TGCTGTAATTCATCCAGAGC-AGATTCAACAACCAGCTCAATTAACTGGAAAACCTCTCC-CTCCTTGGTACCACAGTGGTTCACAGCAACACATAAATAACTCTACCCAAACTCCACATCAAATGGAAAGGTTGTCCCCAGTTGTTTTTAGAAGCT-TAGCCTGTCACTGTGGGTGAGAGAC---CAGGTCTGCAAGCAGCTTTACAATTCAACCGCAAGTCCTCT---CACTCTCAAGAATGC-AAACCCTGTGATAGC------ACACAAGTGGGAAATTCATAGACAAGCTC-CAATTCTAAAAATTGCTACAGCTGGCAAAGCTGCT--GAGCATGCTGTCCAATGGAAATATACCAGCAATGTCATCATATCACTACACCCACGGCATGAATGGAATAGCTTGA--GATCGGTTCAGAAAGAACCAACTATCGGCTCTGTGTAGA---ACCTTTGGTTTGGCTGTCACTCCCCCTATTAAATGGGTGGTTTTGTGGTTCAAAAGAGGAGGAGAATCTTTTTCACTGTGTGCATGTGAG---TGGGCACAGAGGAG .:..x.......:::x..x.-.::::....x:.:......-...:....:...x:.....-.x..xx..x.::...x...:..x--:...:.:............xx...xxx...........::.....x..-...:..:xx.....:.::....-:.:x.:x......x..x.:......---:.x::......::........x........x......:.:.---...x..:.-.....:-...xx..........------...x.x:.:.........x.x.::.....-.............x...x.x.:.....:.:-....--...x.x:.-..........................:..:......:x.x:.:::xx.::......:.:...x:...--:x.::x......:..-----:.x:.:x::....:x.x:.---..............:x.::.xxx..::x......:...:.....x....-----.::.:.:x.......:.:.:x:.:.-.....:x..:---....x.x::..:.. 20M1D19M1I19M1D23M2I48M1I22M1D25M3D41M3D8M1I6M1D15M6D29M1D30M1I4M2D8M1I67M2D15M5I19M3D49M5I25M1I10M3D14M 365/516 70.7% 534/94230402 0.0% 45/516 8.7% 20323944 NA +8566 chr4 + 190214555 72358116 72358115 72358283 168 TGGAGTACACAGGATATATGCCAGCTTTTTGCCAAAGA-TGCCTATGAGATCATTCTTTGAAAGGCCTCCCCTCTATACTCTTGACATGATATAAACTACTTTTATATTTATGTATGCTGGACACTGCTTTAGTGTACTTTATAGATCTTTAAATAAAACCAGCTGTCA chr4 + 94230402 52030149 52030148 52030313 52030149 52030148 52030313 165 TGAAGCCCACAG--TATGTGCCAGATCTACAACAAAGAATGCCTATGAGATCATTTCTCAAAAGACCTTCCTTCCATAGTCCTGACATGATATAAACTGGTTTGGTATTTACGCATGCTGGAAACTCCTTCAATACGTTTTACAG--CTTTAAGTAAAAACAGCTGTCA ..:..:x.....--...:......x.:.x::x......-................::.::....:...:..:..:...x..:................:x...x:......:.:........x...x...:.:.::::....:..--......:.....x......... 12M2D24M1I106M2D22M 127/164 77.4% 165/94230402 0.0% 5/164 3.0% 20327967 NA +3067 chr4 + 190214555 72367721 72367720 72367779 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -3665485 -90564917 +5810 chr4 + 190214555 72374396 72374395 72374790 395 CAAAGAAAACCAGTCACAAGGGATTA---TCTCTTTCAGGACTGTACTCGAATTATTATACATGTGAATT--ATTTAAGAATCAGATAATTTTATGTGGCAAAAGGAAGAAGAAAGCTATGAATAGAAGAAAGTACAAGTTGTCACTAATTATTAACTAGTCAATATGAAAATAAACCCTTCCATAAATAGATTTTTATATT--TTTTTCCTTACACTAAATTTTCTTCCACTTCTGTT-----TCTTCCATCCTGTCCACATTGGTGGATTATTTATTGCTATTTCAGTTATACATTTCAAGAGAATGAGGTGACTGATTATATTTTTGCATAGTTTCTTGGTTTAAAATACTGTGAAAGGAATTTATTTTTAA--ATGTGGAACCTGTTACTATGACATCAAAAATG chr4 + 94230402 52034051 52034050 52034443 52034051 52034050 52034443 393 CAGAAGAAGCCAGTAACAAGAGAAAAACTTCCCTACCAGatttaaaaaaaaaaaaaaaaaGTAGTAAACTGCATTTATAAAT-AGATACCTGCAGGAGTCATGGAAAAGAAGAAAAGCAAAAATAAGAAACAA-ACAAG------CCAATTCCTTAATCATAACAGTCTAACGAAATTCTTCTTGGAGTAGCCCTTCTTCATAATTTTTCCTTATGTATCATTTCC--CCATCATTAATGCGGGTCTTACGTTGTTTCT---TTTGTTGCTCATCTA--ACTACTTTGGCTGTTCATTTTGCTTCGATGAAGCGAGTGAT-GCATTTATATACAGTTGCTTAGTTTTAAATGCTGTGAAAGGAATTTGTTTTTAAACATGTGGAACATGTTATTGCAACAGTAAATGTG ..:.::..:.....x.....:..xx.---..:..x:...:x:.:x.xxx:..xx.xx.x.xxx..:..:.--.....x:...-.....x:.x:.x.x.x..x::::.........:x:.x:....::.:.x.:-.....------.:....x:.x.x.x:.x.xx:.xx..xx...::....:xx:.:...x::..:x.xx.--..........:::xxx....:.--...::x:.:x.-----....x.:.:x.x..:---..x..x.x.:..:..--:...:..::.:.:.x.....::xxxx:....:.:..x....-::....x.::.:....x...:....x....:...............:.......--.........x.....:.:::...x:...x:.. 26M3I41M2I10M1D50M1D5M6D57M2I22M2D11M5I15M3D15M2D41M1D54M2I32M 235/379 62.0% 393/94230402 0.0% 30/379 7.9% 20340345 NA +3009 chr4 + 190214555 72401567 72401566 72401622 56 AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAGAGTGAAAGAAAGGAAGAA chr4 + 94230402 84536580 84536579 84536635 84536580 84536579 84536635 56 AAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAA ..:.......x..x.....x.:...:x...:.......:.x:.::..:........ 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -12135013 -82095389 +4766 chr4 + 190214555 72403090 72403089 72403230 141 TGGGTACCTAAAGTAAGAAACT-GCCATCATGTTTGGTCTTAATT---------TTTCCTTTGTTTTTGCCAAGAATTGAAGAAGACTAAAACAGAT-GATCTCTCTATTTGTAC----------TGAGTGAGGCCT---------GGACATGGTACTTCTGTCACTTTTC chr4 + 94230402 52053996 52053995 52054166 52053996 52053995 52054166 171 TGGGTGCCTGCAGTGGGAATCAAGCCTTTATCCTTGGTTTTATTTAAGAATAATTTTCCTTTGTTATTGCCAAGAATTAAAGATGACTTAAACAGATGGATGTCTCTAATCCTATCATCGGGAGGTAAGCGTAACCTCCATGACACAGACACAGTATTTAAGTCACTTTCC .....:...:x...::...x.x-...x.:..x:.....:...x..---------...........x............:....x....x........-...x......x.:x..:----------.:..:.x::...---------:....::...:..xx........:. 22M1I22M9I43M1I17M10I12M9I25M 107/141 75.9% 171/94230402 0.0% 30/141 21.3% 20349094 NA +3299 chr4 + 190214555 72404786 72404785 72404917 132 AACTCCTTCAACTCAGTAGCAAAACAAACAAGCAAACAAAACACACACACACACACACACACACAC--ACACACACAAAACACACAA--AATAACTCGATTAAAGAATGGGTGAAGGACTTGAATAGACAATTCTT chr4 + 94230402 26446811 26446810 26446946 26446811 26446810 26446946 136 AGCATCTTCACCTCACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACACCCCCCAAAACCCTCCACAGACCTAACCAACAATCCAACAACAAAATAAACCATGAATATGAAGAGGCAAATGTT .:.x:.....x....x:.xx....x....x.:x....xx....x..................x.x.--.x..x.x.x.x.x..x:..--..:..::.:.:x.x.:...::::x.x.:.:x....x..:...x.x.. 66M2I19M2I47M 86/132 65.2% 136/94230402 0.0% 4/132 3.0% 45957975 NA +17906 chr4 + 190214555 72410099 72410098 72410508 410 TCTTTGATTAGGGCATAGGTCATGAGAACTTCCAAATACAGCAGGTTAGAGTATATACTGACATGTCTACAGATTCAAGGAAGGGCTCTGGGCCTAGGAAGTCCCTAGGAG----CAATAAAATAAGAAATAATCTTCTCGTTTTTCTAGTTCTTGTTTCATAGTTTCATTCCCTGGCAACCAGCAGCAACTCCCAAATCATTTCTGACTTCTACATGTTTCCCACCTGGGACAAAAACACGCCTTCACAGCACCATGACAACCACACCAGCAACACAAGCACTCGGGTTCATGCAGGAAAATGAAAATCCTGAAAGGAAGCTAGGAGATAAAGGCTCACTATTCCTTGTTTCCCACTGGTAGGATGTAATTACAAAAATTACTTTAACACAAAG---CTTCTG-GTGAATGAATAGT chr4 + 94230402 52055786 52055785 52056202 52055786 52055785 52056202 417 TCATCCATCTGAACACAGGTCATGAGAAATTCTGTTGAGAAAACCTTCAGATACCTTCTGGCACAACAACAGTTCTAAGAAACACTAATGTGACTGGGGAAGTGCTCAGAGAGGTCTCTGAAGCAAGTAATAGTCTTCCCATTCTTCTATCTTCTATTCCAGGGTTTCACTCCCCAGCAACCATGAGCAATTCCCAAATCATTTCTTCCTCCTACATTTTTCCCACCTGGGACAAAGACACTTGAACCCAGTGCCATGGCAACTCCATCAGCCACACAAGCACTTTGGTTCTTCAGGGAAAATGAAAATTTTGAAAGGAAGCTGGGAGATAAAGGCTC-CTATTTCTTGTTTCCCACTGTTAGGAAGTAATTACAAAAAATACTTTAATCTGAAGTGCCCTCTGTGTGAATAAGTTGT ..x.:x..:x.::..:............x...::xxx.x.:x.xx..x:::..:x.x...:..::x.x....x.::...:..x:x:xx..x.x..:..:.:x:x..x:...----.xx.:..::...x....:.....:.:..:.....x:.::.:..:..x:......:....::.......xx.....:...............xx..:......x..................:....x:xxx.x...::.....:....:x..:....x...........:x.....x.xx:.............::............:..............-.....:..............x.....x.............x........:x::...---.:....-......:.:.x.. 111M4I223M1D56M3I6M1I13M 295/409 72.1% 417/94230402 0.0% 9/409 2.2% 20354313 NA +8274 chr4 + 190214555 72414812 72414811 72414987 176 TACCTCTGTAGTGGAAGTCTTTGGACATGTCTATGGGAGCCTGTTCTACAGCTGATCTCTTGTAGACAACATGAATCCTTCCTTTTTCTTCCTCCATCTGTTTACCTCTTTCCAAGGGTTCAATGAAATACTCTTCATTATCACTTTTTATCATTCCAGCCT----------AGAGAAA--GCACAAA chr4 + 94230402 52065112 52065111 52065299 52065112 52065111 52065299 188 TACCTTCAGTGTGGACATCAGGGAGCATATCAGTGATATGTTGCACTATAGCTGATCGCCTGTACACCATATGGATTCTTCCCTTTTCTTCTTCCATTTGTTTTCCTCTTTCCAAAGGCTCAATGAAGTATTCATCCTCATCAGTTCTTATCATACCAGCCTGGTAAGGAAGAGAGAAATTGCACAAA .....:::xx.....x:..xxx.::...:..x:..:x.xx:..:x...:........x.:....x..x.:...:..:.....:........:.....:.....x...........:..:........:..:..x..x.:....x..:.......x.......----------.......--....... 162M10I7M2I7M 132/176 75.0% 188/94230402 0.0% 12/176 6.8% 20349700 NA +3223 chr4 + 190214555 72450892 72450891 72450990 99 AATAGAAAGAGGAGGAGGAGGAGGAGAGCAGGGAAGGAAGGAAGGAAGGAAGGAAGGCAGGCAGGCAGGCAGGCAAAAAGAAGAGAAGAGAAGAGAAGA chr4 + 94230402 48231244 48231243 48231342 48231244 48231243 48231342 99 AATGAAAAGATCAAAAGTAATATTAACTCAGTGAGGATGGGAAAAAATGCAGCAAGTCATGGGGGCAGGCAGGATAAAAGAAGGGAAGGAATGAAAGga ...::.....xx.::..x.:x.xx.:xx...x..:.:x:....::..x.x..x...x..x.x:..........xx........:....::.x..:.:.. 99M 63/99 63.6% 99/94230402 0.0% 0/99 0.0% 24219648 NA +3009 chr4 + 190214555 72455602 72455601 72455649 48 TCCCAGAACTTAAAGTATTAAAAAAAAAAAAAAAGAAAGAAAGAAATA chr4 + 94230402 72525457 72525456 72525504 72525457 72525456 72525504 48 TTTCAGAAATTAAATCATTAAAAAAAAAAAAGAGGAAAAGAAAAAATA .::.....x.....x:...............:.:....::..:..... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -69855 -94160547 +3438 chr4 + 190214555 72456303 72456302 72456458 156 TATACTATATATATTTTATATATAGTATATATACTGTATATACTATATATAGTATATAGTATACAATATATAGTATATATAGTATATAT-------------------ATTATAGATTTTATATATAGTATATATATAACATATATATAGTTCTATTCACTTCTCTAAAATGTAA chr4 + 94230402 26320252 26320251 26320415 26320252 26320251 26320415 164 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCC--TTTTTAGTATG---AAAAATTAAGTGTGATTTTATTC------CTAAAATGTAA ...x::.:..:...x.xx..:...x..........:....:.x.....x..x...:..x:xx.:.:.....xx.xx:...x......:.-------------------....:....::--.x.x......:---.x..xx..x:.:.::..:.....------........... 89M19I11M2D11M3D23M6D11M 101/145 69.7% 164/94230402 0.0% 30/145 20.7% 46136051 NA +29098 chr4 + 190214555 72463752 72463751 72464339 588 CTTCCACAACTTCACATCTACTTCTTTCTTTATTTTTTAACTTGTCCAGTTACAGGTGGCTAGCAGCAAAGAGTTCCACCCTGCCATTAACCAAAGAGAAGCCTCACTGAAAAGGATCAAGAGCTCTGTGTTTCATCAATTTAACATCCTAGCATTAGCACCAGCCAAGCAGACACAGCCAGCCTGCCAAGACAAACAAATGGGTCTTGGCTAAAGGGGCG----CCCATCTCTGGAGACAGCCCTCCAGTCTAAACTTCTTAAGGAGTCCATATAAACGTGCTTTTATTGAAA-GGTGCTACTCCATCTAAAAAGCACAGATTCAGTTCAAA--CACTACCACCTTTCACGGT-TATGTTGGCTTAAGGTGTGTGCAGCTCAATGACCGTGCAAAACCTGCGTCACAGCTACCTGCTGCTCACTTTTTAAATCCCCAAACCAAAAC-TTCTGGAGCCACATTGAACACTGGCTGTTTTATCAGAAAGAAAATAAGAGTGAAGAAGGATGCTGGGCC-ACAGAATCTTTTCC--TGCCTCCACCCCAACCCCATCCAAATAGAGAGCTGCACTAGGTGAATAAATGGTTATAGGTCTCCT chr4 + 94230402 52075696 52075695 52076263 52075696 52075695 52076263 568 CTTTCCCCCCACCCCTTTTATTTCTCTCTTTTTCCT---GGTTGGACAATCGCAGGTGGCTGACAGC-------TCTATCCTGCCGCTAACTAAATAGAAGCCCTATTGAAAAGCATCAAGAGCTCTGTGTTCCCTCAATTTAATATCCCAGCA------CCAGCCAAGCAGACTCTGC-ATCCTGCCAAGACAAACATATGGGACTTGGCAAAAGGGGAGGGGGACAGTTTCTGGAGACAGCCCTCCAGTCTAAACTTCTTAAGGAGTCGATATAAACATGCTTTTATAAAAAAGGTGCTGCCTCGTCTAAAAA-CACAGATTCAGTGCAAAAACACTACTACCTTTCACCCTCTCTGTTAGTTTAAGGTGTGTTCAGTTCAATGACTGTGCAAAACCTGCGTCACAGCTACCTGCTGCTCGCTTTTTTAATCCAAAGATGAAAACTTTTTGGAGCCATACTGAACACTGGTTGTTTTATTGAAAGAAAAGTAAAAGCAAAGAAGGATGCTTTGCCTGCAGCACATTTTGCTTTGCCTGCACCAAAAC-------------AGAGCTACAGTAGGTGGA-AATTGATTATAAGTTTCCT ...:.x.xx.x:.x.x.:..:....:.....x.::.---:x...xx..:.::.........::....-------..:.:......::....:...x.......::.:.......x.................:.x.........:....:....------..............x.x..-.x................x.....x......x.......x.----x.x:.:.......................................x........:.........x:...-......:.::.:........-............x....--......:.........xx.-.x....:.:...........x...:........:.................................:......x.....xx.:.:x.....-..:........:.:..........:........:::..::...:...:..::............xx...-:...x.:x....x.--.....x....xx...-------------......:..x......:.-..x..:.....:..:.... 36M3D28M7D80M6D19M1D41M4I69M1I20M1D17M2I19M1I92M1I69M1I14M2I15M13D18M1D19M 453/556 81.5% 568/94230402 0.0% 44/556 7.9% 20388056 NA +3026 chr4 + 190214555 72470347 72470346 72470395 49 AAATTATTTTAAGTTTATATATATATATATACACACACACACACACACA chr4 + 94230402 54005676 54005675 54005724 54005676 54005675 54005724 49 AAATTATATTGAACACATATGTATTTATATATACATACACACACACACA .......x..:.::x:....:...x......:...:............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 18464671 NA +5052 chr4 + 190214555 72470377 72470376 72470495 119 ACACACACACACACACACACACACACACACATTTCATATACATAATAT---ATACATCTCATGTATA-ATATATATACACTCATAATATATACATAT----TATGAGTATGTATATACACACATATA chr4 + 94230402 84895804 84895803 84895925 84895804 84895803 84895925 122 ATATACAGGCATACACACACACACACACACAGTTCCTATATAGAGTATAGCATATATTTAGTGTGTGtatatatatatac-----atacatatacattatatataagtgtgtatatatatatatata .:.:...x:..:...................x...x....:.x.:...---...:..:.x:...:.:-.........:..-----...:...:.:..----...:...:........:.:.:..... 48M3I16M1I12M5D12M4I26M 89/114 78.1% 122/94230402 0.0% 13/114 11.4% -12425427 -81804975 +3009 chr4 + 190214555 72498630 72498629 72498668 39 CTCTCACTCTCTCTCTCTTTCTCACACGCACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..::.x............:........:........... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% -2749419 -91480983 +3487 chr4 + 190214555 72533573 72533572 72533683 111 GCAGCGCAG-----TACATTTATATGTATACACATATGCACATATGTATATATACATATATATGTATATGCA----CATATGTATATATACATATATATGTATATGCACATATATGCACA chr4 + 94230402 5214201 5214200 5214320 5214201 5214200 5214320 120 GCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACA ....:....-----:x...xx::.:.:..x.:::.:...:..x:...x.::.:...:..x..:..:......----...:...:.::::.x.::.:.:...::.....x..:.:...... 9M5I58M4I44M 70/111 63.1% 120/94230402 0.0% 9/111 8.1% 67319372 NA +19815 chr4 + 190214555 72548466 72548465 72548900 435 AAGGAGTCTTACCAGACCATCACAGTTGCTGATGGCAACAGAGGTTCCTGGAATGTCCACGATGTCACCAACATAAGCACAGTTAGTCTGCAAAGGCTCTGTTCTCCGGATTCTATACGTAGCACTTCCTGGTTGATGGTTGTTAATGGGATCGGTTATATTCCCAGGCACCAGAGATGTCTCATGCCACTCCACAACAGCCCCAGGAGCTACTAGTTGAGTGTTGGGCTTTAGTCGCAGATGAAAATCTTTTCCAAATGCCGTGATGTTAAAGAACAACTGCTCAGGGTTGGAAGACACGTCCCTCGCTGACCTCTTTTTGTGACTCGCAGAAAGAGTATGGGAGAGATAGCGTCCTTCTAGATTTGTGCTGACTGGAGTCACCAGCTCATACTCTCTATATCTCTTTATTGGTAAATCTGTGGGGTGAAAAAC chr4 + 94230402 52098140 52098139 52098574 52098140 52098139 52098574 435 AATAAGCCTTACCAGACCATCACAATTGCTAATTGCAACAGAAGCTCCAGGGATGTCAGTTATGTCTCCCACGTAAGCGCAGTTGGTCCACAGGGGCTCTCTTTTCCACAACCTCTCCGTAGCAGTTCTAGTCTGACTTGAGTTACCAGCATCGTTTCCATTTCCAGTTTCCACAGAGTCTTCGTACCACTCCACAACTGCCTCAGGAGCCACTAAACGAGTGTTGGGTTTCAGCCGGAGATGGAATTCCCTTCCAAACGCGGTGACGTTAAAATACAGCTGTTTGGGGCTCTGGGATACCTCCCGCGTTGATCTTCTTTGATGGCTTGCAGAGAGTACATTGGAGATATAGCTTCCGTCTGCATTGGTACTAATTGGAATCACTAACCCATACGGCCTTGGTCTGCTTTTTGGTAATTCTGCCAAGAGAAATAC ..x:..:.................:.....:..x........:.:...x..:.....x::x.....x..x..:.....:.....:...::..::......x..:...:x.x:..x.x.......x...:x.x:...:xxxx....x::.x....x..x:...:....x:x...x...xx::..:.:............x...:.......:....:x:..........:..:..:..x.....:..x..::.......:..x....:......:x...:...:.::...:.xx::..:..x....x..:...:..::...x:..:..:.....:..x::..x.....x.....x...x...:x...x..:..:.:....:....:.:.:.....xx:..xx:...x:..x.......x....:x::.x....x.. 435M 303/435 69.7% 435/94230402 0.0% 0/435 0.0% 20450326 NA +3270 chr4 + 190214555 72549943 72549942 72550036 94 ACAAGGGTAAAAAAAAAAAAAAGAAGAAGA--AGAAGAAGA------AGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535391 9535390 9535492 9535391 9535390 9535492 102 ACAGGAGTGAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ...:.:..:..:.::..:xx..x...x.x.--......x..------...:..:.:.....x.............:.x:.::..::....xx.:.:...:.. 30M2I9M6I55M 65/94 69.1% 102/94230402 0.0% 8/94 8.5% 63014552 NA +3733 chr4 + 190214555 72549955 72549954 72550125 171 AAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAA--GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCATAGA chr4 + 94230402 49044660 49044659 49044827 49044660 49044659 49044827 168 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGA-----ATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA ...:.:.......x....::xx:::.:x.:xx.::....x:.:x..x:.....x.--:.:x:....:::.....:xx.:.::........::.x:.:.::x::.:...:..:....-----.x....x:...:.xx:...xx.:.....:.:.:..x:..x.:x.:.....:. 55M2I59M5D52M 96/166 57.8% 168/94230402 0.0% 7/166 4.2% 23505295 NA +3231 chr4 + 190214555 72550016 72550015 72550105 90 GAAGAAGAAG--AAGAAGAAGA--AGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535399 9535398 9535492 9535399 9535398 9535492 94 GAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA .....:....--..x...x.x.--......x...x.xxx:..:....:.....x.........:...:.x:.::..::....xx.:.:...:.. 10M2I10M2I70M 64/90 71.1% 94/94230402 0.0% 4/90 4.4% 63014617 NA +3035 chr4 + 190214555 72550024 72550023 72550101 78 AGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548760 35548759 35548837 35548760 35548759 35548837 78 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA ...:.x...:.....:.x.....x.:..........x..:.x.......:xxxx...:.x.x:x::....:x...x.. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 37001264 NA +3175 chr4 + 190214555 72550028 72550027 72550117 90 GAAGAAGAAGAAGAAGAGGA----AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535399 9535398 9535492 9535399 9535398 9535492 94 GAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA .....:....xx:.x:..x.----...:..x...x.xxx:..:....:.....x.............:.x:.::..::....xx.:.:...:.. 20M4I70M 61/90 67.8% 94/94230402 0.0% 4/90 4.4% 63014629 NA +3288 chr4 + 190214555 72550030 72550029 72550107 78 AGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548760 35548759 35548837 35548760 35548759 35548837 78 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA ...:.x...:.......x.....x.:..........x..:.x.......:xxxx.....x.x:x::....:x...x.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 37001270 NA +3430 chr4 + 190214555 72550036 72550035 72550113 78 AGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548760 35548759 35548837 35548760 35548759 35548837 78 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA ...:.x...........x.....x.:..........x..:.x.......:xxxx.....x.x:x::....:x...x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 37001276 NA +3362 chr4 + 190214555 72550042 72550041 72550116 75 AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548760 35548759 35548834 35548760 35548759 35548834 75 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGA .....x...........x.....x.:..........x..:.x...:...:xxxx.....x.x:x::....:x... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 37001282 NA +3370 chr4 + 190214555 72550048 72550047 72550096 49 AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAA chr4 + 94230402 35548760 35548759 35548808 35548760 35548759 35548808 49 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAA .....x...........x.....x.:..........x....x...:... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 37001288 NA +3261 chr4 + 190214555 72550054 72550053 72550136 83 AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGA---AGAAGAAGAAGAAGGCATAGA-AAGGGAAATCT chr4 + 94230402 35548760 35548759 35548846 35548760 35548759 35548846 87 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAGTGGAGTCT .....x...........x.....x.:.......:..x....x...:...:x---.....x.x:x::..:x.....-:..x.:.:... 51M3I21M1I11M 61/83 73.5% 87/94230402 0.0% 4/83 4.8% 37001294 NA +3065 chr4 + 190214555 72571422 72571421 72571492 71 CATTTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGAAGAATCGCTTGACCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x......:.........:x.:........x.xx:x...x.:.....x.....:..x:xx:..:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -3461785 -90768617 +3363 chr4 + 190214555 72576067 72576066 72576115 49 CTTAGAATCTAGCTTGTTAGGAAGAAAAAACAAAACAAAACAAAAAACT chr4 + 94230402 32920324 32920323 32920372 32920324 32920323 32920372 49 CTGATAACTTTGCTTGTTAGGCAGGAAAAACAAAACAAAACAAAAAACT ..x.x..::.x..........x..:........................ 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 39655743 NA +3463 chr4 + 190214555 72577669 72577668 72577751 83 CGTGGTGGCACATGCCTGTAATCCCAGCTGTTTGGAAGGCTGAGGCAGGGGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:......::...:.........x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -3455528 -90774874 +3621 chr4 + 190214555 72581155 72581154 72581234 80 AGTGGTGTGCGCTGGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCGCTTGAACCCAAGAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::..:--...:.:...........::........x.x::x...x.:..........::..x.xx:..:..:.. 12M2D66M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% -3452045 -90778357 +3114 chr4 + 190214555 72617821 72617820 72617880 60 GTGCAACTGTAGTCCCAGCCACTCAGGAGGCTAAGACAGGAGAATCGCTTGAACCTAGAA chr4 + 94230402 76033204 76033203 76033263 76033204 76033203 76033263 60 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .....xx......:.....:...::::.....:..x.xx.x...x.:........:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -3415383 -90815019 +3018 chr4 + 190214555 72640512 72640511 72640567 56 TAATAAATATATGTGTATATATACATATGTGTGTGTGTATATATATACATATAAAC chr4 + 94230402 15015665 15015664 15015720 15015665 15015664 15015720 56 TATTAAATTTAAGCATGTATGTATATGTGTGGGTGTGTATGCATATGCATAGAAAC ..x.....x..x.::.:...:..:..:....x........::....:....x.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 57624847 NA +3025 chr4 + 190214555 72640513 72640512 72640569 57 AATAAATATATGTGTATATATACATATGTGTGTGTGTATATATATACATATAAACAC chr4 + 94230402 43288484 43288483 43288540 43288484 43288483 43288540 57 AATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGAC ....x...:....:..x..::.:........x....:.......x.x..x....x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 29352029 NA +13422 chr4 + 190214555 72643139 72643138 72643405 267 CCTTAGGTCACTGATCTTC---------TGAGGTGCAGGTTAAATTTTGGTTTTGGGAGTTTTATTTGCCCTCAAGTA---GCCATCTCAGCAGTCCACCACAGACTAGACAGAAACATGAACACCCT-CGGCCACGCCGCTGATGTTGGCTTTCAGGCCATTCTGAAACCAGCATTACAGGAAAGCCTAATATTTGAACTTTTCACTCTTGGTTCATTTTATTAGACAGCAGTGAACATTATCCTTGTACTAAATGATGAAGAGAAAAATATGAAACAC chr4 + 94230402 52131013 52131012 52131291 52131013 52131012 52131291 279 CCTTCAGTCATTGAACTACAGGTCTACGTGAGGTACAAGTTAGGTTTTCCCATTAGGGTTTTTATTCACTCCAAGGCATATGCCATCTCAGCAGGCCACCACAGACTAGACAGAAACATGAACTCCCTACTATCATACTGTTGATGTTGGCTGTCAGGCTACCATGAAACCAGCGCCACAGGAAAGTCTAATATTTGAACTTTTCACTCTAATTTCATTTTATTAGACAGCAGTGAAGGTTAGTGTTGTAAAAAAGGCTG-AGCTAAGAACTTGAAATGC ....x:....:...x..x.---------......:..:....::....xx:x..:..:x.......::.:.:x.:.:.---.............x............................x....-.x::..::.:.:...........x......:.::x..........:::.........:.......................x:x........................x:...x:x.....xx...x.x..-..xx..:..:x.....::. 19M9I50M3I47M1I131M1D19M 206/266 77.4% 279/94230402 0.0% 14/266 5.3% 20512126 NA +3572 chr4 + 190214555 72717904 72717903 72718033 130 TAAAAATATTTTTAAATGTGATTTTATATATATATATATATATATATATATGA--ATATTATTCAGCTTTAAAAAAGAAGAAAATTCTTTTATTTGCAACAACATGAATGTACCTTGAAGACATCATGTTAC chr4 + 94230402 91432058 91432057 91432183 91432058 91432057 91432183 126 TAAAAATGTTTCTAAATCTGATTATATATATATATATTTGCATTCACAAGTGAAGATATAAAATAATATCTGAAGAAAAATAAACTCTTCTAATTAAAAC----TAAGGGTACATTTCAGTC--CATGTTGC .......:...:.....x.....x.............x.::..x:.:.x:...--....x.xx:.::x.:x:..:.:..:x...:....:..x..:x...----.:.:x....x..xx..x.--......:. 53M2I45M4D18M2D8M 85/124 68.5% 126/94230402 0.0% 8/124 6.5% -18714154 -75516248 +3572 chr4 + 190214555 72717904 72717903 72718033 130 TAAAAATATTTTTAAATGTGATTTTATATATATATATATATATATATATATGA--ATATTATTCAGCTTTAAAAAAGAAGAAAATTCTTTTATTTGCAACAACATGAATGTACCTTGAAGACATCATGTTAC chr4 + 94230402 91422922 91422921 91423047 91422922 91422921 91423047 126 TAAAAATGTTTCTAAATCTGATTATATATATATATATTTGCATTCACAAGTGAAGATATAAAATAATATCTGAAGAAAAATAAACTCTTCTAATTAAAAC----TAAGGGTACATTTCAGTC--CATGTTGC .......:...:.....x.....x.............x.::..x:.:.x:...--....x.xx:.::x.:x:..:.:..:x...:....:..x..:x...----.:.:x....x..xx..x.--......:. 53M2I45M4D18M2D8M 85/124 68.5% 126/94230402 0.0% 8/124 6.5% -18705018 -75525384 +5494 chr4 + 190214555 72758436 72758435 72758693 258 AATCTGGATGCTATAAAAAATTTTACCTGTATCAGGCTAAAAAGGATTTTTTAAACAATTGTCAGGCCAATATC-TCATATTGCCAAA--CCCATAAACTGCTTCAAGAAACAGATGGAATTTATATCACAGA--------------------CTCTCAAACCTCATGGGGAGG-GATCTTTGAGTCCAATTAACCCCTTGGCAATAG---TTAATCTGGAGTGATATGCTCAAAGCATCCAAAAATATTTTGTCTAGACTTGCCCACTGCAGAATTTTCTATAG chr4 + 94230402 52153096 52153095 52153376 52153096 52153095 52153376 281 AATCTGGAGACTATTAGAATTTCTCCTTGGATCCATGCTGAAAGTATTTTT---GTAATTTTAAAGCCAAAAACATCCTACTGCCAAGACCTCTTaaaaaaataaaataaaaaagtaagaatgaaaaaaaagaaaaGCACCTTCCAAATGGAATTCACAATTCTCATGGGTAGGTGATCATCAGCTCCAATTAGTCCCT-GGCAGAGGAGTCTGAGCAAGACTGATAGACTCAATGCATCCAAAAATGTTTAGTCTAGACTAAACCAAGCTGGAATTCTCCACAG ........x:....x.:..x..:.x.:..x...x:xx:x:....x......---::....x.x.:.....x.x.-..x..:......:--.:.x....xx:x.xx..x...x.::.:::.x.x.x.xx.x...--------------------:..x...x:........x...-....x.:::x........::....-....:x:.---:.:.x.x:..x.....x:.....x............:...x.........x:x...xxx::.....:..:.:.. 51M3D20M1I13M2I43M20I21M1I24M1D8M3I74M 169/254 66.5% 281/94230402 0.0% 31/254 12.2% 20605340 NA +3837 chr4 + 190214555 72769458 72769457 72769537 80 AGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--...x......:.........:.::........x.xx.x...x.:...........:..x:xx:..:..:.. 7M2D71M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% -3263742 -90966660 +3516 chr4 + 190214555 72804354 72804353 72804435 82 GTGGTGACACACACTTGTAGTCCCAGCTACTTGAGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:............:........x:xx.x.:.x.......:..::.:..x.xx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% -3228847 -91001555 +13750 chr4 + 190214555 72827740 72827739 72828088 349 GAATCTATTATTGTCTTTGAAACAAAATACACAAAGCATTAGTAAAGACAAAAGTTCAAGAATGGTAAATCACTCTTACTTTCAGAACTGAATGCCCTTTCAAATAGTTAACTGCAAAAAGCATAAAACTATGAAACACATAAAAATGGTATGTAACAAATAGTAAAGCATAATGGAAGTTTAACTGTTAAAAGAATAAAATCTGCTAAATGAATAATAGGAGTAGCCAAGCCGGCTATGATTTCATGCTTTTCCATTGTAAAATGTAGGAATCCATTCACATATAATAATTCCAGAGGGAA--AGTTCCACAATTTTAAGATATTTGTGGAGTAACAAGTGAA------CTTCACT chr4 + 94230402 52173284 52173283 52173605 52173284 52173283 52173605 322 GAAACAAGTATCATCCTAGTAACAAGAAAAGCACAAAATGAGCAGAGAGAAAGTCACAGTCCTGGCAAGTCACTT---CTTTC-----------TCCTTTCAAACAGTTAACTGCAAAATACATAAAACT--GAAGCGCATAAAAATGGCATGCAGCAAACAGTAAAACATAATGGAAGTTTAACTGTTAAA------------------TGAATAATAACCCTAGCCAATGTGGCTATGATTTCATGCTTTTCCACTGTAAAAAAGAGGAATCTGTCCACATTTCATAACTCCAGAGGGAATGAGTTCCACATTTTCTGGAT-TGTCCAGAGTAGGAAGCAAGTCACCCCTTCACT ...x.x.x...::..:.x.x.....:.x.x:..x.:x..x..:.:...x...:x:x..:xxx...:..:.....:---.....-----------:.........:..............x:.........--...:.:...........:...:.:....:......:........................------------------.........:xxx.......xx:.......................:.......x:x.......::.:.....x.x....:...........--.........x...:x:...-.x.x::.....:x...::.:------....... 75M3D5M11D36M2D60M18D92M2I19M1D20M6I7M 243/314 77.4% 322/94230402 0.0% 43/314 13.7% 20654456 NA +3324 chr4 + 190214555 72843278 72843277 72843344 67 CAGCCTAAATGACAGGAGTCCCGAAAAAAAAAAAAAAGAAAAAGAAAAGAAGAAGGAAGAAAAAAAA chr4 + 94230402 1046807 1046806 1046873 1046807 1046806 1046873 67 CACCTTAATTCAAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAA ..x.:...x.x.x.:...x.x.x.......:............:..xx..:......:.::...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 71796471 NA +3193 chr4 + 190214555 72894316 72894315 72894374 59 AGGCTGTAACCACCTCTAGGCCCAAAGAGACCAAAAAAAAAAAAAAAAAAAAAAGAGGG chr4 + 94230402 75300424 75300423 75300482 75300424 75300423 75300482 59 AAGCAGCAGCTACTTCTGAGATAAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAG .:..x.:.:.:..:...::.x:x..x.:......................:.:....:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -2406108 -91824294 +3793 chr4 + 190214555 72938017 72938016 72938129 113 GAGGATAGTTAAAACCATGGAGCAGCCAGGCATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGACTGCTTGAGTCCAAGAGGTCAAGGCTACAG chr4 + 94230402 76033167 76033166 76033277 76033167 76033166 76033277 111 GAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::..xx...x::....:.:x:::x.x:..::.........:--......:...........::........x.xx.x.:.x::.....::...::..x.:x:....::.. 44M2D67M 70/111 63.1% 111/94230402 0.0% 2/111 1.8% -3095150 -91135252 +3820 chr4 + 190214555 72939065 72939064 72939172 108 AAAAAAAATGAACGAAAGAAAGAAGAAAGAAAAAAGAGAGGGAAGGAAGGAATGAAGCAAGGAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGGAGGGAG chr4 + 94230402 65771204 65771203 65771311 65771204 65771203 65771311 108 AAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAG .......:x...::.....:....:.:x:x.....xx:::....:....:.x.::..::.::.x:..x.xx:.....:......:..:x...x.....:x:x..::.. 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 7167861 NA +3722 chr4 + 190214555 72950107 72950106 72950182 76 TTTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAT-CACAT chr4 + 94230402 85834539 85834538 85834615 85834539 85834538 85834615 77 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...:...x...................xx..:..x::...:....:..x...:..:.x...::.:.:...:-..... 71M1I5M 57/76 75.0% 77/94230402 0.0% 1/76 1.3% -12884432 -81345970 +3116 chr4 + 190214555 72950109 72950108 72950191 83 TATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATCACATTCTCTTTAT chr4 + 94230402 79265520 79265519 79265601 79265520 79265519 79265601 82 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACA-CCTCTATAT .:..........::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.:.x:.:x...-:....x... 73M1D9M 54/82 65.9% 82/94230402 0.0% 1/82 1.2% -6315411 -87914991 +3235 chr4 + 190214555 72950110 72950109 72950173 64 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094147 70094146 70094210 70094147 70094146 70094210 64 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..:.......x...x...x.....:.....:......x.:.xx.x:...x........::.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 2855963 NA +3437 chr4 + 190214555 72950111 72950110 72950177 67 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x...............:...xx..:..x::...:....:..x...:..:.x...::.:.:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -12884430 -81345972 +3071 chr4 + 190214555 72950114 72950113 72950169 56 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 68837095 68837094 68837150 68837095 68837094 68837150 56 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .....:.............:.:.:.x...:...:...:.:..::.:.:..x.x... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 4113019 NA +14328 chr4 + 190214555 72953536 72953535 72953918 383 GAAAATCATTAAAAAAGGAAATAAAAGTAAAATAAATGTCTCTAAGTTCACACAATGTTATCTGCATATTTTGAAAACAATTTCACTATTTGGTGGGAAGTCAAATGAAGCCATACACAAATTTAATACTCAAATGAGGGGAAAAAAGTTGGCATCAGGGCATTTGCTGCTTGCCAAGCTGAAAGAATGTTATTGAAGATCCCTTACATAAATGTTCCTTGACCTTTGAGTGAACCAACAGGTCTTAAAAGTTGCATTTGCCAAAGCAAGTTCCCATAGCAAATAAAGTTTTCAGATGAGTGCATCAGATTTTTTTCCCTCTTCGGCCTAAAGAGGAATTACCATCAGCCATCACCAGGAAGAGCAAGTTAACTTTTCAGGTT chr4 + 94230402 52201596 52201595 52201940 52201596 52201595 52201940 345 GAAAATCAAT------GGAAGCTAATTCATAACACATGACCCTGCCTTTACATGATGCTGTCTTCAGCTTTTAAAAGAAATTTTCCCACT-----GGAAGTCACAAGGATCCATGCA--GTTTTAATTCTCAGAAGAGGTG--------------CAGGGCTTTTTCAATTTGCCAAGTTAAAGGAATGTTATTGAAGATTC-TTACATAAATGTTCCTTGACCTCTGAATGAACCAACAGGTCTTAAAAACTGCATTAGGCAAAGCAAATTCCCATAGCAAATAAAACATTTAGCCCAGCGGATCAGA-TTTTTTCTCTCTATAGCACAAAGGAAACT---------CCGAGACCAAGAATGGCAAGTTAGCATTTCCTGTT ........x.------....::x..xx:.x..:.x...x.:..:xx..:...::...:.:...x..xx....:...:x.....:x.:.:.-----........x.x.:.x....:..--:x......x....:.x....x.--------------......x...x.x::........:.:..:................:.-......................:...:....................::......x.x........:.................::x..:..x:x..:.x......-.......:....x::..x:....:::.x.---------..:xx....:...x:........:.x....xx... 10M6D74M5D22M2D22M14D47M1D106M1D29M9D35M 259/345 75.1% 345/94230402 0.0% 38/345 11.0% 20751940 NA +3007 chr4 + 190214555 72955698 72955697 72955764 67 AAAAAAAAAAAAAAAAAAAAGAATAAAGAAAAAAAAGAAAAAGAAAGAAAAGAAAGAAAGAAAGCGA chr4 + 94230402 54037034 54037033 54037100 54037034 54037033 54037100 67 AAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAA .....:..............:.:.:...:xx:.::..x......x...:.:::..:.:.x:..:.:. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 18918664 NA +3060 chr4 + 190214555 72979501 72979500 72979572 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...xx::x.........:..x.xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -3053705 -91176697 +3357 chr4 + 190214555 72981934 72981933 72981992 59 GCACCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::..:.....x.xx.x...x.:...........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -3051272 -91179130 +3965 chr4 + 190214555 72984671 72984670 72984768 98 CTGATTCTTGTTTCCTTGGAAAAGTGTGCTTCCTGCTTTGAACCGTCCTGTACCTTGGCTCCATTAGGTTTCCATCTGCTTAGGTCAAG--CGTGAATCA chr4 + 94230402 52214025 52214024 52214124 52214025 52214024 52214124 100 CTGACTCTCACTTCCTTACAAAAGTATGTTTCCTGACTTGCATTAATCTGCAGTTACAGTCAATACGATTTCCATCTGCTTATGTCAAGTACGTAAACCA ....:...:::......:x......:..:......x:...x.:::x:...:.x:.xx:x..x..xx.:..............x......--...:..:.. 89M2I9M 68/98 69.4% 100/94230402 0.0% 2/98 2.0% 20770646 NA +3190 chr4 + 190214555 73045319 73045318 73045368 50 TCTCAAAGCAAAAAACAAACAAACAAACAAAAAAACCCCAATTTATTGCT chr4 + 94230402 48799554 48799553 48799603 48799554 48799553 48799603 50 TTTCCACATAAAAAACAAACAAACAAAGAAAAAAACCCCAAACTACTGCT .:..x.x::..................x.............x:..:.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 24245765 NA +3598 chr4 + 190214555 73045325 73045324 73045408 84 AGCAAAAAACAAACAAACAAACAAAAAAACCCCAATTTATTGCTCAAAAATGCTAACAATCATCTGACTCTTTAGTGAGTTGTA chr4 + 94230402 77919160 77919159 77919242 77919160 77919159 77919242 83 AGCAAAAAACAAACAAACAAACAAAAAAAACCCAACAAATTGTGCAGAAA-GATAATAAGCaattaaatttattttaaattaCA .............................x.....:xx....:x..:...-.x...:..x..x:.:.x.:.x.xx.:.:..::. 50M1D33M 61/83 73.5% 83/94230402 0.0% 1/83 1.2% -4873835 -89356567 +3168 chr4 + 190214555 73051284 73051283 73051335 52 GCTTTTTAAATTTATCTTGCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 37944947 37944946 37944998 37944947 37944946 37944998 52 GTTTTTTAAGGTTATCTTTCTCATCCTTTTTTTTTTCTTTTCTTTTTTTCCT .:.......:x.......x..:x.:...........:....:.......::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 35106337 NA +8251 chr4 + 190214555 73058106 73058105 73058365 260 AAAATATGTCATTTTCTTGAAATGAACTTGGTATTAAAGGCAGCAAATATGTCTTTATAAGGAGTTTCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTGGAGCATAACCAGTAGAGAACAATTGACTATAAAGAGA-AGACATAAATGTTAGCATCT----------------GTAATTCTACAAGGAC----ATCACAGTCCAGACAATAAAAAATAAAATGA chr4 + 94230402 52230640 52230639 52230920 52230640 52230639 52230920 281 AAAGCACATTATTTCTTAAAACTGTACTTGGTAGTCAAGGCAGACACAATATCCCTGTAAGGAGTATCTGAGTCAGATTTGGTCCTCGGTATGCAACACAGTCGACGAACGGTCGGAGAACGGAGCAACAGGTTGTGAGAGAGTCCCATGAAGCTTGAGGACAACCAGTACAACGCCATGGACTGCAACAAGACAAACACCGAGTTCAGCCTCCCCTAGGTGCAATTTAGGCAGCTCTTCACAAACCACAACCACATTCCCAGTTATAAGAAAAACAATGA ...::.::.:....::.x:..x..x........x.x.......xx.xx..:..::.:........x.....:..x..:......xx:.....x.::..x...:.:....xxx:x........x....:..::..x..x..:..x....:......x...x.:........x.:x:.x..x....::..x:...-.:...:x:.xx.:...x..:----------------.:.::...x..x::..----.:....x...x:::x....:...x.x..... 193M1I20M16I16M4I31M 173/260 66.5% 281/94230402 0.0% 21/260 8.1% 20827466 NA +3464 chr4 + 190214555 73063177 73063176 73063248 72 GCGCCTGTAATCCCAGCTACTCGAGAGGCTGAGACAAGAGAATCACCTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:.........:..:........x.xx.x...x...:......::.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -2970029 -91260373 +6491 chr4 + 190214555 73064776 73064775 73064928 153 ACCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTAGCTAACTGTTCCTGAACAGAAAAACCTGCTAAAACAGTTTTATAAATAAAACAA chr4 + 94230402 52232659 52232658 52232799 52232659 52232658 52232799 141 ACCTCCACTATCAGCAAATTTAAGAGTCCAAGTGAGACTGGCATAATCCACGTGGAATCTGGTGCTGTGAGGTCTGTAAACCACAGTGTCCCACCTGTCGAAAACTGCTCTTGAA------------CTGAAACAACAATGTAAAGAAGACAA ...........:.:......x.x..xx....xx....:x....x......x.....:..x.....x........x.x.........x:.:.....x..x.xx.....:..:....------------..:.....::xx.:....x..:.... 115M12D26M 107/141 75.9% 141/94230402 0.0% 12/141 8.5% 20832117 NA +7538 chr4 + 190214555 73065200 73065199 73065415 216 ACAAAGAC--AATGTTAGAGAACTTCTTTGGGAGAAGACATACAA--TAATTACCTTCTGAATGTGCTGCCCCCGTGCTTAAATTCCGGAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTGGCTTTGAAAGGGTGGCAGTTATCTCGCACATATAGCTCTGAAATTAGCCTCCTCATATTCTTTAGATAAGTGAGCCT chr4 + 94230402 52233792 52233791 52234011 52233792 52233791 52234011 220 ACAGAAACTAAAGGACAAACGACTGTTTTGAGTGTATTTATTCAAACGGATCACCTTCTGAGTCCAGGGCACCAACGCTGCAGTTGCGCAAGGCAAGGGACACACAGACCCACATTGGAATCTGCACCCACACCAATAAAGTGGCTTTGAATGGATGGCAGTTGTCTCGAATGTACAGTTCTGTAATAATCCTCCGCAGCTTCTTCTTAAAATGGAACCT ...:.:..--..x.x:.:.x:...x:....:.x.x.xx:..x...--x:..:.........:.x::xx..x..x::...xx.:..x..x.::....::....::x...:...........x...x.:...x.....:.x............x..:........:.....x.::..:..:....x...x.x.....x..xx.....:xx.x..xx..:... 8M2I35M2I173M 146/216 67.6% 220/94230402 0.0% 4/216 1.9% 20831408 NA +6131 chr4 + 190214555 73068020 73068019 73068145 126 TTAGCTTACCTGGCATCTCTTTTGGACCACCCCAACTGATTTGCACGAACTGCAACTTCTTGGTTAAGATGCCTGGCAATAGTTTTTATTTCTGGCTGCAAATTTTCCACCTAGCTAAAAAATAGG chr4 + 94230402 52234701 52234700 52234826 52234701 52234700 52234826 126 TCATCTTACCTGGCAACCTTTTCAGACCAACCCATTTGCTTTCCACGAACAGAAACTTCATAGCGAAGCTGCTCAGCTAGTTTTTTAATCTCAGGCTGCAAATTCTCCAACTAGCTAAAGAAAAGG .:.x...........x.::...::.....x....x:..x...x.......x.x......x.:.:x...x...:::..x.xxx....x..:..x...........:....x.........:..x... 126M 93/126 73.8% 126/94230402 0.0% 0/126 0.0% 20833319 NA +63102 chr4 + 190214555 73075623 73075622 73077556 1934 GGGAAACATCCAATGATAATGCCCATTATTTTACTTTATACTTAAATTACACCAGTAGAAAAGTTATGCTTATTAATAGTTTAATGTATGAAGGAAACATCCAGATTTCTGAATATGAAGGTACATATCTCACATTAATTTAAGTCTACATAAAGTAGAGCCTCTATACTGACATATTGAAATTTACTTTCTGCTTAGCCTTTTCTGTTATGTAAACAATTGTACATTTATTTGCCATTCTAAAACTTCAGGATCAAGTTTACATAATTTTGCTAAATTTCCGTGTTTGCTCAGAAGCAGTTTACAGTACTAAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAAGAAAAATGATAAGAAAAATGCTAACTAAGGTAAAACGGATGATGATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTCAAGCACATCAGTAGAATGATTTGGGAGCATAATTTTTTTTTTCGGCCACTTGTGATTTCCTCCAAATGAAAAGGAATCTGCAGGCTAACAAGCTGATCCTCATCAGCCAAGCTGGTTCATATGCACACTGTTCATGTGAGGTGCCCAGGGTCCAGTCCACACCTATGAATATAGAGCATGCATTTTACAAAATATATATCTAGCATATATTTTATTAAAATAAAACTTTTAAAAAACTAAGGAGGTACTCTTCAAT------------TTGCAATATACTAGGAACTAATGGAAAAAAATGAT--------AAAAACCTTTTT---TCTATTATTTTCCTACCTCTTATCCCT-CAAACAGAATCTGATTTACAACCTTTAAAAAAAAAATCATTACCTGAGCATTT------ATAGATTCACGGTTGTGGAAGAAAAATAAATCAAAGATATTA---------------------AACATA-CACTAAACTAAAATATACAACCATTTATGTGAATTCTCAGAGTTATTTATAGTACCT--TTAATAAATAACCTTTAGATGGTCTTTTCACACCACT-----------------------------------AGTAAACTTTAATGTATAAAAT-CATATGACAGTCACTT---TGCAACTTAAAATCTTTCATTT----------ATTATCTG-CTACCC-AGTAGAATA----------------------------------TACAATACCTTTCATAATTTTAGCC--CCAAACCTGCCTTTGGTACCA-----CTGCCCACAGCCCTCT---GCTATATTGCAGCTATATTAGATTTCCTCAACTGCCCATATT-------------------CACCAAACTCTCTT---------GCTATCATGAGTTACCT-----------------------GAATCCTATTTGTCTTTGC------ATTTCTTAAAC-ACAAAACAACTGTTTATTCACTGAATGATCAGCCTCACCGTTTGAGGGCCATTATTTTCCGTGGAGCTGGAAACCATCTTTATCAGTGAGTTCCAAGAAGGGTCTGCAGCATGAGGGCCATTAAATATGGGTCCTCCAGCACCATCAGGGATAGGTGCTACTGGAGGAATCATTGCATTCCCATACACAGAAAAAGGCATACCCTTA----AAAAAGGAAAACACACACATTAACATCCA-----AGTCATTGTTCATTTTTCCCAATATAATCAATAGCCTTAAAA------TTGATATTT----GAAAGTTCACCTCATCCTGGGAATGTGTAACTT--ATCTAAGA--AATCT-----AAAAATTATTAC-CCAT----------TATATAACTTATTTTAACATTAGATTAT-------ACATATGCC-TACTATATTCAAAACATTTTCTC------------------------------AGAAAATCC------TCCCTTAAATAACTAGTACAAAATCAGGACTTTACCCCAACTTTAGGAAAGTCCATGTAGCCTGCAGGAACATGCTGATGGAATGTACCAGAAGGAGTTACAATTCCTGTACTATCTCGCTCCATTGCTTGATGTTGTGAAAATACTCCTGGGTCAGACATCGGTCTGTGGATCATAGGATTTCCCATCCCAGGGTTACACCAGTCTACTTTGTCTGAGGGCAAACAAAGAGGCAAA chr4 + 94230402 52237425 52237424 52239582 52237425 52237424 52239582 2158 GGAAAAAACCCTCTGATAATGCCCAGT-TTTTACACTGTACTTAAATTACACAAGTAGAAAAGTTATGCTTATTAATAGTTTAATGTATGAAGGAAACATCCAGATTTCTGAATATGAAGGTACATATCTCACATTAATTTAAGTCTACATAAAGTAGAGCCTCTATACTGACATATTGAAATTTACTTTCTGCTTAGCCATT--TGTTATGTAAACAATTGTACATTTATTTGCCATTCTAAAACTTCAGGATCAAGTTTACATAATTTTGCTAAATTTCTGTGTTTGCTCAGAAGCAGTTTACAGTACTAAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCAA-------------AAAAAAAAAAAGAAAAAGGAAAGAATAAAGGCTAACTAAGTTGAAACGTATGATGGTGGGGAATGGGCAGTCAC-AATGTTCACAGAAAA-AGGTCAGTTAGTAAGTTCTTCTGCAAAAAGCCTACACACTTCAGTCAAGCACATCAGTAGAATGATCTGGGAGCAC-ATAAACTGTTTCTGCCATTTTTATTTTCCTCTGGA--AAAAGGAATCTCAAGTCTAGCATGTTGATCCCACTCAGCCAAGTTGGTTCATATGCACACTGTTCATGTGAGGTGTCCAAGTTCCAGTCCACACCTG-AAAGAGATAGCTTA-ACTTAGTACCACAGATCGGCAG---------TTTCAACTCAAAGTATTTCAGAAACCAA--AACTACATTTCAGTGCTTATTTTCCACCGCAGTGAATTCCAACATCAGAAAACATAGCGATCAGTCATCAATAAGCTACTTGGATTTATTTTCATCATGTTTTTTGCTACTGCAGTTCAGATGAGACCTCTAGCTTTCAGAGTGAAAGGC--TATCTATCCTTTTCACCTCATAAAAGCTC------AGGAGACTGAGAAATTGAATCTGTCACCTTCAACTGTCTTCTCCCAGAACATACCAATAAGCTAAACTCCAGGAAAACTCAAGTG---TAACAAAG-----TAGAGCAACTTCTTGAGGACAAACGGCTGCATTTTCCTCGTGTATCTGTCAGTATGACAGAAATCAGTGTATAATTAAGAATAAAATGGAATTTAGTGTAAAAACTACCAATGGTAAGGTCTTGCCTACAACATAAAGAAGCTCATCTGCAGTAATTAATCACATGACTACTCAAATTGAATAGACTCAGCTGGAATCAAACATCCTAATTCTCAAGTACACTTCTTTAAACTGTATTAACTTACTGATGCTGTTTTTTATATCGAGTGTCAGCTTATACTTATTTTTGGATAGACAACTAATGTTTGAGTTGTCTTTA--TGTCCATACTGTATAGAGAGGTGGAAAGAAATAAAAAGAACTTAAGAAACAAGCCAAAAGGAGAAACTTATTTTTAAACTTCCTACCAGCTAGGATCTTA--TATCTTCACCATGTGGTTTCTTAAGCTAGAACAAAACTGCAAACATGA-GAACAAAAAACATTACCGTCTGAGGCCCGTTATTTTCTGTGGAATTTGAAACCATCTTTATTAGCGAGTTCCAAGATGGGTCAGCAGCATGAGGCCCATTAAATATTGGGCCCCCAGTACCATCTGTGATGGGGGCTACTGGAGGAATCATTGCATTCCCATACACAGAGAAAGGCATACCCTTATGAGGGAGGGAAAAAAACAAGCATCAGTATGTATTCACAGACACTACTCCTATT---AAACATACACAGTAAC---AAAAGGGGACTTGACATATTAAAGAAATTCTGTCTCAAAGTAGCAAAATGCAGCCTTAATTTAGGAATAATCTTTTTATGCACTTATTACATCATGGGCATATGATATTTTGCTAGTTCTAGGCTTCGGCAATACTGCTCACAGATGCTACACTGCACAGCAAGCAGTATCTCATGTTCTCTATCTGTCAGACACACAGATGTAGAAAAATCAAGCAGTACAGCACATACGAAGTACAAGA--GGGTCATTACCCCGACTTTTGGGAAGTCCATGTATCCTGCAGGAACGGGCTGATGGAATGTACCAGAAGGCGTTATGATTCCTGTGCTGTCTCTTTCCATGGCTTGG---TGTGAAAACACACCCGGATCAGACATGGGCCTGTGGATCATGTGGCTCCCCATTCCACTGTGACACCAGTCCACTTTATCTAACAACAGACCAACAGAGAAA ..:...x.:..xx............x.-......x:.:..............x...................................................................................................................................................x..--............................................................................:........................................................................x.-------------...:.............x..x.::.x...x..........x.:.....x......:..................-...............-...............x..................................................:........:-..xxx:.x....x....:..x.:x.......:::.--...........xx..x...:..x.:......:xx.........:...............................:...:.x..............:-:..x.x.x...x.:-.:..x::.xx.:.x..xxx:..---------.x.:..xx:...::x...x.:....:..--.:x...x:....:.------------::...:.:x.:.xx:.xx.x.x::..x.x.::...--------..x..x..x:..---.:....x.:x..x.:::.:..:::x..-..:x:x::..xx..::.x:.:.:..:.:.:x:...:x.--..:..:xx.x...------...:.xx.x.------:.:...xx:.x....::..xx.:.:.---------------------......-..x...:.....x.x:.x:.xx.:.:.x...---.xx..:..-----..x..:.x..--..:.x:.xx...xx:.:x..xx..:.:x:::.:.xx.-----------------------------------.:.::.x....:....x...x.-.xx...::.:xxx...---.:....x....:xxx:....:.----------..:.:x..-....:.-.:.x.....----------------------------------....x.x.:..xx.:x:.x...:.:--.::.xx...::...x:..:.:-----.x..::.:.x::x.:.---.x..x.:x:.x:x.:.x.x..x.x..:.:.--..:.....:.-------------------x.:x...xxxx...---------..:.xx.x...xx..:.-----------------------.:...:..--.:....::.------:........:.-.x..x.x.....:xx.:x::x-...::.xx.:.x.:.....:.....x..:........:.....::.x..............:..:...........x.....x...........x...........x..x..:....:......x.x...:..x...................................:...............----::.::.:....x...x:...:.::..x:.-----..x..:.::..x.x..---x..:...xx..:..:.---....------....:..x.----....x.::::....xxx.:.x..x:..:.:.:.--..:..:..--.....-----x:x.x.......-:...----------...x.x:..x:..:..:xx..x.::x..-------...x....:-:...::.:xxx..:..x.x....------------------------------......x:.------.x.xx:.x...xxx.......:.--:..x.x.......:.....x..:...........x...........:x......................x....::........:..:....x:.....x.....:---........:..x..:..:........x..:...........:x.::.:.....:...xx..x.........:.....:...:.x::..:..x..x..:x... 27M1D175M2D151M13D74M1D15M1D76M1D35M2D97M1D14M1D22M9D28M2D14M12I35M8I12M3I27M1I38M2D13M6I10M6D26M21I6M1I31M3D8M5D10M2I37M35I22M1I16M3I22M10I8M1I6M1I9M34I25M2I21M5I16M3I30M2D10M19I14M9I17M23I8M2D9M6I11M1I21M1D185M4I29M5I16M3D16M3D4M6I9M4I33M2I8M2I5M5I12M1I4M10I28M7I9M1I23M30I9M6I23M2D107M3D102M 1398/1868 74.8% 2158/94230402 0.0% 356/1868 19.1% 20838198 NA +17268 chr4 + 190214555 73078639 73078638 73078901 263 TACCTTGATTGCCACCAATCCCTTCAAAGGACCAGATGCCACTATGTCCTACTGATGTAGACAAATTGCTCCCAATAACAGATGGAGCTGACGTTCCAGTTTGCCTGATACGTGCAGAACGTTCAGTCCCAATAGGGACTGGAACTTTCCTGTCCTGAGACACATTGCTGGGCTTTTCTGACCCTAACGGTACTGATGATGGGGCAGGAGATGGTGCACGAACTCCCGAGGATACTGACTGTGCAGAAGAATCTAGAGAAGAG chr4 + 94230402 52241007 52241006 52241269 52241007 52241006 52241269 263 TACCTTGATTGCCACCTATACCTTCGAAGGACCAGATACCACTATGTCCCACTGGAGCAGCTAAGTTGCTCCCAATAACAGATGGAGTAGAAGTTCCAGTTTGTCTAATACGTGCAGACCGTTCAGTCCCAATTGGAACAGGAACTTTTCTGTCCTGAGAAACATTACTGGATTTTTCTGATCCCAAGGACACTGCTGAGGGGGTAGGAGACTGCGTTCGTACTCCAGAAGACACCGACTGAGCAGGAGATTCTACAGAAAAG ................x..x.....:...........:...........:....:x.:..x:..:......................:x..x...........:..:...........x..............x..:..x........:...........x.....:....::........:..:..x.::....x...x....:......:x.:.:x..x.....x..:..:..:.....x....:...x....x....:.. 263M 215/263 81.7% 263/94230402 0.0% 0/263 0.0% 20837632 NA +3689 chr4 + 190214555 73082010 73082009 73082092 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGAGAAGCTGAGGCAGGAAGATTGCTTGAGCCCAGAAGGTGGAGGTTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:............:.:......x.xx.x::.x::.....:........x.xx:..:.::.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -2951187 -91279215 +3113 chr4 + 190214555 73082359 73082358 73082420 62 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGGACTGCTTGAGCCTAGGAGTTT chr4 + 94230402 76033206 76033205 76033267 76033206 76033205 76033267 62 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT .::.x......:...........::........x.xx.x.:.x::.....:..:..:..:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -2950847 -91279555 +15954 chr4 + 190214555 73085235 73085234 73085452 218 TGTATAAAACTCACCATTTGATGCTGATGAACACGGAGTCAACAAACTAAGCGGGGAAAAATGTTGTCTGTTAAAGTTAGCAGCTGCGGGTGCTCCTCCAAGGGGTGCCCCAGGTCCGTACATCTGACCTCCTGAAATGTTTGAAGCAAAGTTTCCCAAATGTGTTGAAGAAGGTGTTACAGAACCATATGGCGAGTCCATATTGACAATACCTATAA chr4 + 94230402 52242103 52242102 52242320 52242103 52242102 52242320 218 TGAGTAGAACTCACCATTTGATGCTGATGAACATGGAGGCAATAAACTAAGTGGGGAAAAATGCTGTCTGTTAAAATTAGCAGCTGCAGGTGCTCCACCAAGAGGTGCCCCAGGTGCATATATCTGACCTCCCGAAAGGTTTGAGGCAAAGTTACCCAGGTGTGTAGACGAAGGTGTTACAGGAGCATAGGGTGAATCCATACTGACAATACCTAAAA ..x:..:..........................:....x...:........:...........:...........:...........:........x.....:............x.:..:...........:....x......:........x....::.....x..x.............:.x....x..:..:......:............x.. 218M 188/218 86.2% 218/94230402 0.0% 0/218 0.0% 20843132 NA +3177 chr4 + 190214555 73086890 73086889 73086985 96 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATCTGTAGGAT-----TTTAAATAGGTTTAAGGACCAAA chr4 + 94230402 51472479 51472478 51472579 51472479 51472478 51472579 101 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAAA .......:x:x...x.x.x...::......:..x.....:.......x.:.:.......:x..:x::..x..x-----x.x...x.:...:..::..x... 73M5I23M 65/96 67.7% 101/94230402 0.0% 5/96 5.2% 21614411 NA +3405 chr4 + 190214555 73086898 73086897 73086952 55 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495001 1495000 1495055 1495001 1495000 1495055 55 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..x.:.........x.:...............:.:..:...:.....x....::. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 71591897 NA +3123 chr4 + 190214555 73086899 73086898 73086950 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:......x........:.:..:...:.....x....::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 71591895 NA +3253 chr4 + 190214555 73086899 73086898 73086951 53 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:....x..........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 71591899 NA +3060 chr4 + 190214555 73086900 73086899 73086954 55 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATC chr4 + 94230402 85548420 85548419 85548474 85548420 85548419 85548474 55 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATC .............:.:xx.x..:...:.:.:.::...:..........x...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -12461520 -81768882 +30988 chr4 + 190214555 73090659 73090658 73091108 450 AAACTCACCTGAGGGACTTGGAGCAGGTCTCTGTAATGGTGGTCTAAAACCTGGAGCTTTGGAAGTATCAGACTGATGTAAAGGATCTGAATTTGGCAAATATGAGGATTTTCCTGATAGCATAGATTCTGGTGTTGACTGAGATGAAACAACAGATCCTCCCCAGAAGGCATGAGCAGAAGTAGGGCTGTTTTCAAACAATGTGCTAAAGGGCCCAAATGGTAAGGGGGCACTGAAATTGGGAGCAATAGGCTTATTTGCTGGATGTACTGAATTCTGACAAGCACTTTGTGTACTTAAGGTCGAAGGTAGCTGGACAGAAGAGGGAACACTGTGAGGTCTTTTAATGTGATTGACACTGAGGACTGCAACAGATGAATTTTGCACTGAAGCTGAATTCTTGTGAGGGGCAGTTGTGCCATGAGGGGGTGGTCTAATAGCAGGGGTTTC chr4 + 94230402 52243997 52243996 52244446 52243997 52243996 52244446 450 AGACTTACCTGAGGGACTTGGAGCTGGCCTCTGTAACGGGGGCCTAAAACCTGGGGCTTTGGAAGTATCAGACTGATGTAAAGGCTCTGAATTTGGCAAAAACGAAGACTTTCCTGATAGCATAGACTCTGGTGTTGTCTGAGATGAAACGACAGAACCACCCCAGAAGGCATGAGCAGACGTAGGATTGTTTTCAAACAATGTACTAAAGGGCCCAAATGGTAAAGTAGCACTGAAATTGTTACCCATGGACTTGTTCGCTGGATGGGCTGAATTCTGAGAAGCATTTTGTGTACTTAAGGTAGAAGGAAGCTGCACTGAAGAAGGAACGTTGGGGGGCCTTTTGATATGATTAACATCGAGGAGTGCAACAGAAGAATTTTGCACAGGAGCTGGATTCTTATGGACGGTGCCCGTTCCCTGGACAGGTGGTCTGATGGCAGGGGTTTC .:...:..................x..:........:..x..:...........:.............................x...............x.:..:..:.................:..........x............:.....x..x....................x.....::................:....................:.x:............xx.x.x..:.:...:..:........x:...........x.....:................x.....x.....x..x.....:.....::..x.:..:.....:..:.....:...::.....x.........x...........x.:.....:......:..::x..::x::..x..x..::x:........:..:........... 450M 376/450 83.6% 450/94230402 0.0% 0/450 0.0% 20846662 NA +74613 chr4 + 190214555 73091142 73091141 73092335 1194 TGTCTGAGGCATAGGGTAAGTCACTGGGGCAGTAGAAGGCACCGCCACTGGAGCAGA---ACTTGT---TGCTAAA---GGAGGAACAGTCATTCTAACTTCCGGGGGAGGAACCTGAGACTGCTGAAGAGGTGGTCTTGGTTCCTGAGAAACAGATCCCGGAGGTTGTTGCTGATTAGAATGAGCTGATGAACTCCCAGAAGAACTGCTGCTGTTTGGAGGTCTAGTGTTTGT---------TGTTTCTACTACTGGTGGACTACCTGCTTCCTGTTCGGAGGAAGATGCCACTTTATTTGGAGATGCTGATCCACAATCCAAAGGGCTGTTTCTAGAAACCCCTCCTGGCTGGGCTGGTGGTGATGGGGAAGATGGGGATGATACTGGATAGTGTTCTTTGGCAGTAGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTTGTTGTTGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATTGGATGTCTTCACAACTGTGACAAAAAGCTGCCTTCGGACAGAAGGTGAACTTGGACTGCCATTTGTAGATGTACCAGGCACCGTTGAAGCTGATGAACTGGTTGTAGTTGTTGGGCTTGAAGTTAAAGAACCTGCTGAATTCACCTGAGAACCACTGCTATTCTGATTGCTATGGCGAGGCACCATGTGAGGCTTAGGCGAGTTAGTAGCTCTGGCAGGGCTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATTGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTTGGTGGACGGATCTGCTGGAAAGTCTGAGCAGCAAGCAAAGCATGTGCAAACTGTGGAGGAGGATATGCTAATGGAAGAGAAACTGGAAAACCAGGCCTCACATTATTCACTGGGTTCTTAATGGTTTTGTGAGTGGATGCAGAAGAAATTGCAGGCACAGTGAGTGCTGTGGCAGTTTGAGATGTTGATGACAGAGCTACAGTTGTCATTTTAATTCCCATTAAGGAAGTGTTAGCAGC---AGTGGTGGTAGGTGCTGATGACCCTATTTTGGAATTTGCTGAGGAGCTTTTCAAACGATTCTTTGGAATAAGTTCATCAATTTCTTTGTCTGGATCCTTGATCAAAGCATTAATCAATTGAGTTGCTTGTCTTGTTGATTCAGTGCCACCCCTATAAATTGAGAAAAAAAAATTAGGTA---GAATTTT chr4 + 94230402 52244933 52244932 52246144 52244933 52244932 52246144 1212 TGTTTGAGACATGGGATAGGTCATTGGGGCATTTGTTGGACCTGCCACAGGAGCAGATGAGCTTGTCACTGCTAAATTCGGAGGCACAAGCATTCGAGGATCTGGTGCAGGAACCTGAGGTTGCTGAAGAGGGGGCCTTGCCTCTTGCAGAGGAGCTCCTGGAGGCTGCTGATGAGCAGGGTGCACAGAAGAACTCCCAGAA------CTTGTACTGGGCTGCCTAGTACTGGTCGAGCTGCTTGTTTCTACTGCTGGCGGACTACCCACTTCCTGATCAGACGAAGGTGCACCTTTATTTGGAGAGGTTGCTGCACAGTCTGAAGGACTGCTTCTAGAAACGCCTGCTGGCTGTGCCGGAGGAGAAGGCGATGATGGGGAAGATGCAGGGTAGTGTTCTTTGGCAGTAGGAATTGGATATGTGGCATTCGTAGCCGCTGTGCTGGTGTTACTTGCTGTGGTCGTCACCGTGGTTGTCGTGGCATTTGACGTCTTCACAACAGTAACAAAAAGCTGCCTTCTGACTGAAGGTGAACTTGGACTGCCATTTGCAGAAGAACCAGGCACAGTAGAAGCCACTGAACTTGTTGTAGCTGTTGGACTAGTTGTCAAAGAACTTGCTGAATTCACCTGAGAACCACTGCTGTTCTGACTGTTATGGCGAGGCACCATGTGAGGTTTAGGCGAATTGGTAGCTCTTGCAGGGCTCAACGGCCTAACAGGAAATGGACCCCATGTGGACTGAGCTGGTGGGAAAGTACCTCCAAAGTGCGTCATGGGCAACCGAGGCGGACGGATTTGCTGGAAAGTCTGAGCAGCGAGTAGAGCGTGTGCAAACTGCGGAGGAGGATATGCTAATGGAAGAGAGACTTGGAAACCAGGTCGCACATTATTCACTGGATTCTTAATGGTTTTGTGATTAGATGCTGAAGAAATTGCAGGCACGGTGAGTGCAGAGGCAGTCTGAGATGTTGATGAAGCAGCTACGGTGGTCACTTTGATTCCCACAAGAGAACTGTTAGCAGCTGTAGTGGCGGCAGGTGCTGATGTCCCTATTTTGGAGTTTGCAGATGAACTTTTCAAGCGGTTCTTTGGAATAAGTTCATCAATTTCTTTATCTGGATCCTTAATCAGAGCATTAATCAACTGTGTGGCCTGTCTTGTTGATTCCGTGCCACCCCTGAAGAACAAAAGAAGAGGAAAAGGAAAGTGAATTTT ...:....:...:..:..:....:.......x.x.xx..xx.:.....x........---:.....---.......---.....x...:x.....x.:xx..:..x.x...........::...........x..:....x:..:..x::.:x..x...:.....:..:..x...x:..::..x:.x..x............------..xx.::.x..xx.:.....::.x..---------..........:....:........::.......x..:..x....:...xx.............x.:..x.x....:..::....:...:..........x...x.......x..:..x..x..x..x..x........x...:.x..:....................x..x..............:..:.x:..x...:..x....:.....:.....:..x..:..x.....x........x..:...........x..:................x...x.........................:...x.x.........x..x.....::x......x.......:......:..x.xx..:.......:...........................:......:..:......................:........:..:........x...........x.....:........:........x.....:...........:.................x.............xx..:........:....................:..:.:...:...........:..........................:...x.:........:.x...............:..................x.:.....x.................:........x.x......:..............x:x......:..x....:...:.......:x.::...x..........---.....:..:...........x............:.....x..x..:........:..:.............................:...........:....:............:..x..x..:..............x...........:x.:.x::.:.:..:.::.xx...x.---....... 57M3I6M3I7M3I123M6D26M9I783M3I179M3I7M 978/1188 82.3% 1212/94230402 0.0% 30/1188 2.5% 20846209 NA +10318 chr4 + 190214555 73094074 73094073 73094238 165 TTTGCCTTATAGTGATTATCCGGTCTCCAGTCTTGTCTTTCTGTTTATCAATATCTATGTGTGCACCAGTAAACTCCCGAATAGCATTGATATTACAGCCTCCTCTTCCAATCACTCTGGATATCACAGTTGATGGAACAGATACTTTCTTTGACCTGTTTAAAA chr4 + 94230402 52246582 52246581 52246746 52246582 52246581 52246746 165 TTTACCTTATTGTTATTATTCTATCTCCAGTTTTGTCCTTCTGTTTGTCAATGTCTATGTGTGCTCCCGTGCATTCACGTATAGCATTGATATTACATCCTCCTCTGCCAATGACTCTGGAAATGACAGTTGATGGAACAGAAACCTTCTTGGATCTATAGGAAA ...:......x..x.....:.x:........:.....:........:.....:...........x..x..:x.:..x..x.................x........x.....x........x..x.................x..:.....x..:..:.xx:... 165M 135/165 81.8% 165/94230402 0.0% 0/165 0.0% 20847492 NA +3495 chr4 + 190214555 73095043 73095042 73095113 71 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGATGGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x....:.:.........::::........x.xx.x...x........:..:.:..x.xx:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -2938161 -91292241 +3165 chr4 + 190214555 73095462 73095461 73095544 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTCGGGAGGCAGAGGCAGGAGAATCACTTCAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.........:.::....x...x.xx.x...x.....x....::.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -2937735 -91292667 +11987 chr4 + 190214555 73097082 73097081 73097284 203 AGCACATAAAAAGAATGACAAAAACAATT---ACTCACCTTCTTACAACTTCTTTCCATCCTTCTTCCCTCTTTTGCCCACGCTTAGGACTTGCTACTGTTAACTTCCCATTTGGAGAAGAAAGGGGAGATGGACCAGATTTTGTACAAGTAGATAGAGAATTACTGGTCCCTTCACTGATAGTTTCTGACAATCTTTAACAAAGA chr4 + 94230402 52246810 52246809 52247015 52246810 52246809 52247015 206 AGAACGTAAGAAGGAAATTAGGGAAAAGTTCAGCTTACCTTCTTACAACTTCCTTCCATCCTTCTTCCCTTTTTTGACCACGTTTAGGGCTAGCAATGGTAAGCTTTCCATTTGGAGAAGAAAGGGGGGAAGGACCAGATTTTGTGCAAGTAGACAAGGAATTACTTGTCACTTCACTGATGACTTCAGACAACCTTTAAAAGAAA ..x..:...:...:.x:x:.:::.x..x.---:..:................:.................:.....x.....:.....:..x..x.:x..x.:...:....................:..x..............:........:.::........x...x..........:::...x.....:......x.:.:. 29M3I174M 160/203 78.8% 206/94230402 0.0% 3/203 1.5% 20850272 NA +9390 chr4 + 190214555 73098066 73098065 73098230 165 AACTAACTTTATTGAAGCCTTGCCAGAAACAGATTTTCTCTCTTCCTTTGGAAATGTAACAAGAACTGATGGCTGCTTTTTGCTGCTCACAGTGGTAGTGACCACAGCTGGTGAATGATTGTCACTCTTACGACTGCTGTTGCTGTTACTACTTTCATCGCTGCA chr4 + 94230402 52247970 52247969 52248134 52247970 52247969 52248134 165 AACTTACTTTATGGATGATTTGCCAGTAACTGCTTTCTTCTCATCCTTTGGACAAGTAACAAGAACCGATGGTTGCTTTTTGTTGCTCTGTGTGTTAGTAACGGCTGTGGAAGAATGATTGTCACTTTTGTGGCTGCTGTTGCTATTGCTGCTTTCGTCGCTACA ....x.......x..x.x:.......x...x.x...::....x.........x.x...........:.....:.........:.....xxx...x....:..x:.x.:x.:x..............:..::.:...........:..:..:.....:.....:.. 165M 128/165 77.6% 165/94230402 0.0% 0/165 0.0% 20850096 NA +19539 chr4 + 190214555 73098229 73098228 73098550 322 CAGCTGGAAATCCTCATGTTATCACTGTCCCCACTCTCGCTGGTACTGCTGCTCTTGGACTCTCCATTCACCTTCTCTGGCTGACTGTATGAAATTGGTAGTGGATCATCAAATATAATTTGAACGTTTTCTGGAGTAATTTTATTTTTCCTGTTTTTCCTCTTTGAACTGGTTGTAGTTATGGTATTATTTCTTTTACCATGAGAACCTGCCAAAGTTGTCCAGGTTGCAGATATACCTATGGTAGTAGTGGTTGTGGCACTTGGAGGTTCTGTCAAGACTTCAGGCTCATCT-GTAAAAG------TAGCAATACTGAATTAGCAAG chr4 + 94230402 52248639 52248638 52248967 52248639 52248638 52248967 329 CAGCTGGAAATCCTCATGTTGTCACTATCACCACTTTCACTAGTACTGCTGCTCTTAGATTCACCATTTACTTTTTCTGGTTGGTTATAAGAAATTGGGAGCTGGTCATCAAATATGATCTGAACATTATCAGGGGCTACTTTGTTTTTCCTGTTTTTTCTTTTGGAGCTTGTTGTGGTGATGGTATTATTCCTTTTCCCATGAGAACCTGCTAAAGTTGTCCAAGTTGCAGATATACCTATGGTGGTTGTAGTGGTAGCACTAGGAGGCTCCATTGGGACCTCTGGATCATCTGGTGGAAGAATATAAAACAGTACTAATTTAGAAAG ....................:.....:..x.....:..:..:..............:..:..x.....:..:..:.....:..::.:..x........x..:x.:...........:..:.....:..x..x..:.:x.:...:..............:..:..x..:..x.....:..x...........:.....x..............:...........:....................:..x..:..x..:.....x.....:..::.:::...:..x..x......-..::...------x.:..:....:.x....x... 294M1I7M6I21M 257/322 79.8% 329/94230402 0.0% 7/322 2.2% 20849590 NA +3096 chr4 + 190214555 73100771 73100770 73100856 86 TTTTCTGTAGTTTGAAAA----TTTTCAAAATAAAATGCTGGAGAAGGGAAATTAAAAACAAAACAAAACAAAACACACACACACATACA chr4 + 94230402 37755062 37755061 37755146 37755062 37755061 37755146 85 TCTGTTGCAGATTGAGAAAAGTGATTAGAGGCAACATCATGAAGAAGG-----CAAAAGGAAAACAAAACAAAACACACACACACACACA .:.x:..:..x....:..----xx..x:.:::..x..xx..:......-----:....:x..........................:... 18M4I26M5D37M 60/81 74.1% 85/94230402 0.0% 9/81 11.1% 35345709 NA +13241 chr4 + 190214555 73102368 73102367 73102563 196 GAAAATACCTTCAACTTTAAGCTTTTCTTTTTCTTGAGCAGCTTGGAGTTCAAAGTTCTCTTTATTTTTGGCTTCAATTTCTTCTAGTTTCCTTCTTTGTTCTTCCTTTTTCTTCCTTCTCTTCTCTTTTCTTTTTTCTCTTTTCGCAGCCAAAGCCAGCCTCCGACTTTCTTCCCTTAACT---GTTAAAGATCAATA chr4 + 94230402 52249784 52249783 52249982 52249784 52249783 52249982 199 GAAATCACCTTCAGCTTTTAGCTTCTCTTTCTCCTGAGCAGCTTGAAGTTCAAAAttttctttagtttttgcttcaatttcttctaattttcttctttgttcttcttttttcttcctccgtttctcctttcttttctctcttttAGCAGCCAAAGCCAATCTCCTACTTTCTTCCCGTAGCTAAAATTAAAGCACATTA ....x:.......:....x.....:.....:..:...........:........:..:......x....x................:...:..............:...........:.x:.....:........:........x.............::....x...........x..:..---:......xx..x.. 182M3I14M 166/196 84.7% 199/94230402 0.0% 3/196 1.5% 20852584 NA +3710 chr4 + 190214555 73106748 73106747 73106821 74 GCGCACCTGTAGTCCCAGCTACTCGGCAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.:x........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -2926456 -91303946 +3071 chr4 + 190214555 73109981 73109980 73110034 54 ATACTATTACCTAGCTCCCTAAAAGTTTACCAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 26269579 26269578 26269632 26269579 26269578 26269632 54 ATTTTATTCCTTTGCTCCCTGGAAATCTACCATTAAAAAAAAAAAAAGAAAAAA ..x:....x.:.x.......::..:.:.....xx.............:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 46840402 NA +9649 chr4 + 190214555 73113788 73113787 73113924 137 TTACCTTTTCCAAGTCTAACTCCTCTAACAAAATGCTGGCGTTTTTGTTTGCTTCAGCAGCCTGTCTATCTTTGGCTTGTACTATTGACTCCATACAAAGATGACACTTCTTCAGCATCTCCTATAATGAAAAATTA chr4 + 94230402 52250749 52250748 52250885 52250749 52250748 52250885 137 TTGCCTTCTCCAAGTCCAATTCCTCTAAAAGAATGCTTGCATTTTTGTTGGCTTCAGCAGCCTGTCTATCTTTGGCTTGAACAATTGATTCCATACACAAGTGGCACTTCTTCAGCATCTCCTAAAATAACAAAGTA ..:....:........:..:........x.:......x..:........x.............................x..x.....:........x.::..:....................x...:.x...x.. 137M 117/137 85.4% 137/94230402 0.0% 0/137 0.0% 20863039 NA +8745 chr4 + 190214555 73115814 73115813 73115930 117 ATATTACCTTATCAGTGATGGTTGCTATGTATCTCATACATTCAGAATCTGATGGAAACTGATTGACTTCTTTGACTAAGTAGCGCACCACCTTCACATGACCCTAAAAAATAGATA chr4 + 94230402 52251816 52251815 52251932 52251816 52251815 52251932 117 ATCTTACCTTATCAGTAATGGTTGCTATGTATCTCATACATTCCGAATCAGATGGAAACTGGTTTACTTCTTTCACTAGGTAGCGCACCACTTTTACATGACCCTGAAAAAGGAATA ..x.............:..........................x.....x...........:..x........x....:............:..:..........:.....x::... 117M 103/117 88.0% 117/94230402 0.0% 0/117 0.0% 20863998 NA +11513 chr4 + 190214555 73118682 73118681 73118857 176 TTATACCTTTCTAAATGCTGCCATAAGAGGAGTTATCTTGCGGTTATCTGCTGCATCCACATCTGCACCTGCTTGCACCAGTAACTGAACCACATCGAGGTGTCCACCATTTGCTGCTAGCCACAATGGAGTGTTCCCCTTCTTGTTACGTACATCAATATGAGCTCCCCTAAAAA chr4 + 94230402 52252469 52252468 52252644 52252469 52252468 52252644 176 TTCTACCTTTCGGAAGGCTGCCATAAGAGGAGTTATTTTCCTGTTATCAGCAGCATCCACATCTGCTCCGGCCTGGACTAGCAATTGGACAACATCTAGATGCCCTCCGTTTGCTGCCAGCCACAGTGGAGTATTCCCCTTCTTGTTACGCACATCGATGTGGGCTCCTCTACAAA ..x........x:..x....................:..x.x......x..x..............x..x..:..x..:..:..:..:..x.....x..:..:..x..:........:.......:......:.................:.....:..:..:.....:...x... 176M 144/176 81.8% 176/94230402 0.0% 0/176 0.0% 20866213 NA +14061 chr4 + 190214555 73120159 73120158 73120394 236 TACCTGCCAATAAGAAGCTCACAGAATTTGTAATGCCCTTTATCTGCTGCTATGGTTAAAGCTGTATCTCTTGAGGAGGGAACTGGAGGGGCATTAACATCAGCACCTTTATCCAAAAGAACTCGGCCCACCTCCGCATATCCACCAGAGGCAGCTTCCATTAGTGGTGTGAGACCAGTCTAAGTTTAGTGTAAAATTAAAAGTAATGACACGTAAGAGACTGGAAAGATCTAAAA chr4 + 94230402 52253422 52253421 52253650 52253422 52253421 52253650 229 TACCTGCTAATAAGAAGTTCACAGAATTTGTAGTGCCCTTTGTCCGCTGCAATGGTTAAAGCTGTGTCTCTTGAGGAAGGTACCGGAGGAGCATTTACATCTGCACCTTTGTCCAGCAGAACTCTGCCTACTTCTGCATATCCACCAGAAGCAGCTTCCATTAATGGCGTGAGACCAGTCTACGAT-------AAACACGCAGGAAAATCAAGCAAGTCATTTGAAAGAACTGGAA .......:.........:..............:........:..:.....x..............:...........:..x..:.....:.....x.....x........:....:x.......x...:..:..:..............:.............:...:..............x.x.-------...:xx:x..x..x:x..x.:...xx.:.x......x..::.. 186M7D43M 186/229 81.2% 229/94230402 0.0% 7/229 3.1% 20866737 NA +19447 chr4 + 190214555 73120875 73120874 73121762 888 TCTTACCTTAGCTCTGTGTTCAACATTTGCTTTTCTATCAAGCAGAAGACTAACCACTTCAGTTCTTCCTTGGAAGCAGGCTAAAGTAAGGGCAGTGTTCCGATTGGTTTCTATCTGAGCATTTATGTCAGAGCCCATGTCTAACAGGAGCTTAACAGCAGCTGTATGCCCATTCATAGCTGCTAACATCAGAGGAGAGATGCCCAATTTGCTACCAGTTCTAGGGGTGCAGGTATGGGGAAAACAAATGGAAAAATATATATTTTAAATGA---CAGAAAAATTGGAGATGATATATAATTCTA-----------------------------------------ATCTAAGATTATTTTGAAGGATTGTTTA-AAATATCCATTTTTCTCAACCTTAGTAAGTCTCTGAGATACTACC-----AAGACTCCATTAGAAATGTTTTATTAGAATATT--------------TTTTGTATTTCACT----CAACATAATGACTTAGGCTGGAAGGTGATTAATAAGTTATTA---GGATAAA-------------------CTTTCAATCTTA----------AAGCATGTA----TTAGCTTGCTTAATAA--AAGCTTCTAAGATGTTTACATTTAGTATCAT---------AAGAAACAGTACTCAATATTTTTCAAACTCTATATCAAGTTTTAATTACTTAAATAAAGTTCATCTCAAAAATCTCTAACACTT-----------TGAATGCCAAATTTGTAATAAAGGGATTTACTAAA----------TTTGGCACTAAA---------AAATAGG--TGTTCTACAAATATCTAT------------AACAGTCTTACTAAAT-----------AAGGGGCTTACAGAAAGGG---------------------AATACAACTTGCCTAGAGTTAATCTCAGCTCCTGCATTTAGTAATATTTTGATGATGTTCACATAGCCACCAGAAGCAGCCAGACTTAGAGGTGTGTAATCAGAAACATTCCTGTGCTCTTTATTTGCCCCTCGAGCTAACAATAGCTCCACCACCTG chr4 + 94230402 52254675 52254674 52255743 52254675 52254674 52255743 1069 TCTTACCTTAGCTCTATGTTCCACATTTGCTTTTCTATCAAGGAGCAGGCTAACCACTTCAGTTCTCCCTTGGAAACAAGCCAGAGTTAGTGCTGTATTTCTATTGGTCTCTATCTGGGCATTTATATCAGAGCCCATGTCCAGTAATAACTTCACAGCAGCAGTGTGGCCATTCATGGCGGCCAACATTAAGGGAGAAATGCCCAATTTGCTACCAGTTCTGAAAGAAAAAATA-AAGGAGTTTAAATCG-CAATCACGTTCCTGAGATGACTTCAACAAAAACAGAGAAAATAGAGTATTTAACAAGAATGGAAGTCAGCAACACAGCAACTACAACTGGAGCCACAGAAGGTTCTTGTCAGCAACTTTGGACAAGTATTTCTATTTC-AAAGCATCGCAGGCATGTTAGATTCTAACTGCTGCAAATTTAA--AGGCATCTCTTATGAGGAACTTAACTTCTGCTTAAACTTTTTATTTGACTTGTGCAACGCATGG--TTGAACTGCTCAATGTATGAAGAGGCACTACATAGATGCAAACACACAGCAAATTCTTTCTTTAAATTACAGGCAAGAAACAAACATGCACACttttttttttttaattatttaaCCCAGAAGTAATTTCAAACTAACAGGACAACCAGAGAAAGATGAAATACTT--TTTTTTTTTAACCTTTAATCAAAGAGGACTGACAT-AACATGATGCATGGTGGAAGTTATCAAAACGTACAGAAGGAGCTGGAAGTTAAGTGAGCACTGAAAAAGCATAGTAAAAAACCTTTCCTTTCTACCTGAAGTCTACTACAAGTAAGACAGTTACATGGATATTTATCATGTAAGCACAAGCCAGCTTGTTCAATTTAGTTGCCCAGAAAGCCTTTCGAAAAGGGTAAAGACCACGAAGAAGTGAAAAGGGAACTTGCCTGGAATTGATTTCTGCCCCAGCATTTAGCAGAATCTTGATAATGTTCACGTAGCCACCAGAAGCAGCAAGGCTTAAAGGTGTATAATCTGAAACATTCCTGTGCTCTTTGTTTGCCCCTCGAGCTAGAAGCAACTCCACCACCTG ...............:.....x....................x..x..:.................:........:..:..:.:...x..x..x..:..:.x......:........:........:..............:.::.:x.:...x........x..:..x........:..x..:.....:.::.....:.......................::::.x:x.::..-::...:xx:....x.-x..x:.::.x::.x.:....---..:x....x::....x:...x.xx...:x.-----------------------------------------.:xx...:..x..x.x.:x:.:.x.xx.-..:...::x.x....-x..x.x.x.:.:.:x.x.x....x...x.-----x.:.:.:x.--..:x..x.:....x..:.xx..--------------:...x.....x...----....::.xx.--..:::...xxx::..xx.:.x:..x:.:..---:...:x.-------------------....x...:x:.----------..:....:.----..xx:..x:.....x.--x.:.::xx...xx:...xx.x:..::.xx.:---------....x:x.:....:--.x.....:x...::.xx.....:xxxx.x.x..x.-..:.x::.x...xx:::..:.:x::..x..x.-----------..:.x.::..:.xx.:.x.:..:::::x..x....----------...xxxx..:..---------..:..:.--x...x:.:::....:...------------.:.x:x...::.x...-----------:.::.x...x.::......---------------------..x:x.........:..:..:..:..x..:..x........:.:x..:.....:........:.................x..:....:......:.....x....................:................:x.::.:............ 235M1D15M1D20M3I30M41I28M1I15M1D29M5I9M2D22M14I14M4I10M2D30M3I7M19I12M10I9M4I16M2I31M9I14M2D35M1D32M11I35M10I12M9I7M2I18M12I16M11I19M21I158M 595/878 67.8% 1069/94230402 0.0% 201/878 22.9% 20866200 NA +18291 chr4 + 190214555 73124906 73124905 73125327 422 ACATTACCTCCTGTCTTCCCCCAGAACAAGCCAAGGAGAGTGGTGTGTCCTTGGTTCTTTCAGACTGGGCTTCAATGTCTGCACCATTGTCCAGCAATATTTCCACAACACCAACATGACCAGCTGTGGCAGCCAAGATGAGTGGAGTAAAACCTGGA--GAAAAATAATG--------------------ATCTTCTCACTACATG--CTAAGGCAAAAGAACAAAATATCTGACCTTCAAAATAGGACTAAAAAATAATGTTCCTAAATAAATTTTTTGACCAGTATTCCAAAAAATAAAACAAAAGTAGGC---------------------CCTACCTTTCTTGTCTCGGTGCTCTATACTAGCTCCTCTCTCTAGCAGTGTTTGTACCAGTTCCTCGTGGCCACCAGCACAGGCAAGTGTTAGTGCCGTGTCATGATTACTCTCAGTCT--ATAAGAAATTATT chr4 + 94230402 52257659 52257658 52258122 52257659 52257658 52258122 464 ACTTCACCTCTTGTCTCCCTCCTGAACAAGCCAAGGACAAGGGAGTATCCTTTGTTCTCTCCGACTGGGCTTCGATATCAGCTCCATTATCAAGTAAGATTTCAACAACACCCACGTGGCCAGCTGTAGCAGCCAAAATAAGTGGAGTAAACCCTAGAATGAAAAAGGATGTTTGAAGAATCCACATTCATAACTTCAAATTAAGTGACTTATGTTAAACCATCAAGAAAGCAAGCCTAAAAGCTTCACACAAAAACTATATTTACTGCATA-----TTTATTTACTACTTTACAGTGGAAGACAAGAGTGGGTCTGTATTGCCACGGTGAGATACCTACCTTTCTTGTCCCTATGTTCAATATTGGCTCCTCTCTCTAGCAGTGTTTGTACTAGTTCTTCATGGCCACCAGCACAAGCAAGCGTCAATGCTGTGTCATGATTACTCTCAGTCTGAAAAAGAAATAATT ..x.:.....:.....:..:..x..............x.:x..x..:.....x.....:..x...........:..:..x..x.....:..x..:..x.....x........x..:..:........:........:..:...........x...:..--......x:...--------------------.x....xx.:..x:..--:..x.x:...xx.x...:.x.x.x::...xx..:x.xx:xx:.....x..xxx..x..:x...-----...:x::.x..:.::.x.:x:x..:....:...:..:---------------------...............:.x:..:..x...:.:..........................:.....:..:..............:.....:..:.:...:......................--.x.......x... 158M2I11M20I16M2I63M5D37M21I119M2I13M 314/417 75.3% 464/94230402 0.0% 52/417 12.5% 20867247 NA +3218 chr4 + 190214555 73124942 73124941 73125026 85 AGAGTGGTGTGTCCTTGGTTCTTTCAGACTGGGCTTCAATGTCTGCACCATTGTCCAGCAATATTTCCACAACACCAACATGACC chr4 + 94230402 52278787 52278786 52278866 52278787 52278786 52278866 80 AGAGGAGTGTGACCAT-----TTTCATTATGGTCCTCAATACTTGCGCCCGATTCCAGCAGTACTTTCACAACATCAACATAGCC ....x:.....x..x.-----.....xxx...x.:.....:::...:..xxxx.......:..:..:.......:......::.. 16M5D64M 57/80 71.2% 80/94230402 0.0% 5/80 6.2% 20846155 NA +13853 chr4 + 190214555 73135110 73135109 73135371 262 GACTTACCTGTGCATCAATATCAATGGCAGGGTAGATAGGAAGCATGGCTGAAGGAGAGATGATAGGACTTGGAGTTGGAGTCTGAGGTTGGGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTGACATTGCAGATGCTCTTCCACTGACTGCTGTTGAACAAAATAACTGCACTTAATAAGGATGAAACATTGTTAAGTAATACTAAGACATATT--CACTCAAAAATATTTAAAGACTTCTTAAAACAATATGTCTAC chr4 + 94230402 52259245 52259244 52259503 52259245 52259244 52259503 259 GGCTTACCTGAGCATCAATATCTATAGCAGGGTAAATCGGTAGCATGGCTGAAGGAGAAATGATAGGACTTGGAGTTGGCGTCTGAGGCTGGGAGACAGAAGTTGCAATGCTGTGGGTAGGAGTGTTTGACATTGCAGATGCTCTTCCGCTCACTGCTGTTGAACAGAATGATTACAATTAGTAAAAGCAACAGA-GGGTAAGAACTCCTCAAATATTTCAATATTCAGAAATGTGC----ATTTCTCCATACATTTTATCCAC .:........x...........x..:........:..x..x.................:....................x........:.....:.::..x.:x.....:......................................:..x..............:...:.:.:..x...:...:::::.x.x.-x.x....x.x.x..x.:.:..x.:--:.:...:....:.x:----.:....:x.x...x.x.:..:.. 195M1D24M2I15M4D23M 201/257 78.2% 259/94230402 0.0% 7/257 2.7% 20875865 NA +71108 chr4 + 190214555 73139456 73139455 73140411 956 CAAAAAATTTGGGTACATTCTTACTCGCCTTAAGCAAATCATATTTGATACCTGCTCATAACAATATAAACCCACCTGCCATGATGTCATCCAGCGTGTCATTGAGGGTCTGAGCAGGGCTGGCTACCATTAACCCTTGTTGTGTTTCTGTCAGAATTCCTTGCCCCAGCCCTGCCAACTGTGCTTGGCCCAGTACTGGCTGTCCAACTATCACTCCTTGCAGTTCTGTAAGATTTGCGATGGACCCTGGAGGCAAGGGACCTGCCGCCAGAGGCAAAGCTTGAGGCATCGCCAGAGGCTGGATTGGCGCAAAACCCATCTGAGCAGCAGTCTGCTGGGGTTCATCTTTAAGTAAAACAGGATCCACTTGCTGTAACCGTGCATAGTCTCCCTCAGAAAGCTGCTCTCCAACTCCAACAGGAGTTAGTAATCCCAGGTGTTGGCAAGACTGT---TGCTGCTGTTGCTGAAGTTGAATTCTTTGAGCTTTAACCTCTAGATACTGCTTTTTTAGCTGCTGCTGAGTTTTCAGTTGTAACTCTCGTTCTACTTTCTGTAGTTCCTCCAAAATCTTTTGTTTCTTCTGAATTTGTTCCTCCCTTGTTTTGTTGAGCTCCTCGATCTTCTCCTTGGTAAGTTGGTCAGCATGAGCCAGTTCCAAGGACTGCAGCTGTGCATTCTTTTCTATGGCTTCTTTTATCCTCTGTTCCAGTTCTGTTAACTTTCCCTGAGCCTCTTCTACAATGCTCTCTGGAGACTGATTGGTGATGTAACCCTGTACATCCTGGCTGTTTGCTGGCAAATGGCTGCTGGACTTTTGTTTAGAAGCAGCTGTGTGAAAAAGAAACCCCCTCA---------GAAGTGCACATGAATGGCATCCTCATTACAGAGTTACTGTTGGGAGGTTTAGTGCCAACAGTTATGCACTAAGTAATCATATCCATAACAGGTGAAAATGCACT chr4 + 94230402 52265435 52265434 52266384 52265435 52265434 52266384 950 CAAAAAAAGCTGACATACCCTCAACTGG-TTAAGCAAAT---ATT--ATACCTGCTCATAACAATATAAACCCACCTGCCATGATGTCATCCAGCGTGTCATTGAGCGTCTGAGCAGGGCTGGCTACCATTAACCCTTGCTGTGTTTCTGTCAGTATTCCTTGCCCCAGCCCTGCTAGTTGTGCTTGGCCCAATACTGGCTGTCCAACTATAACACCTTGCAGTTCTGTAAGATTTGCGATGGACCCTGGAGGTAAGGAACCTGCTGCCAGAGGCAAAGCTTGTGGCATCGCCAGAGGCTGAATTGGCGCAAAACCCGTCTGTGCAGCAGCTTGCTGAGGATCATCTTTAAGCAAGACGGGGTCCACTTGCTGTAATCGTGCATAGTCTCCCTCTGAGAGTTGTTCTCCTACCCCAACAGGAGTCAGAAGTCCCAGGTGCTGGCAAGACTGTTGCTGCTGCTGCTGCTGGAGCTGAATTCTTTGCGCTTTTACCTCTAGATATTGCTTTTTCAGCTGCTGCTGAGTTTTCAGCTGTAACTCTCGTTCCACTTTCTGCAGTTCCTCCAAAATCTTTTGTTTCTTCTGAATTTGTTCCTCTCTCGTTTTGTTCAGCTCCTCAATCTTCTCTTTGGTGAGCTGGTCAGCGTGTGCCAATTCCAAGGACTGCAGCTGAGCATTCTTCTCTATGGCTTCTTTTATCCTCTGCTCCAGCTCTGTCAACTTGCCCTGAGCCTCTTCTACAATGCTCTCTGGAGACTGATTGGTGATGTAACCCTGTACATCCTGGTTGTTTGCTGGCAAATGACTGCTGGACTTTTGTTTAGAAGCAGCTGTGTGAAAAAGAAACCCCCTCAGAACCAATGGAAGTGCATATGAATGGCATCCTCATTATAGAGCTACTGTTGGGA-------TGCTAA-----ATGCACTGAGACACAGCACCCACAGAAGGTCAGAAAGTACT .......xx:x.::.:.::..:.x::.x-..........---...--...........................................................x................................:..............x....................:.::.............:..................x..x......................................:....:......:.................x.................:...............:....x.......::.....:..x...........:..:..:..:..............:.................x..:..:..:.....x..:...........:..x.:.........:............---........:.....:..:...........x.....x...........:........:....................:..............:........:.........................................:..:........x........:........:.....:..:........:..x....:..................x........:.......................:.....:.....:.....x...............................................................:................:.................................................---------........:...................:....:...........-------...:..-----.......:..xx.:x::.:...:.:x....x.:..x.:... 28M1D10M3D3M2D405M3I400M9I45M7D6M5D41M 842/938 89.8% 950/94230402 0.0% 30/938 3.2% 20874021 NA +22368 chr4 + 190214555 73141712 73141711 73142788 1077 AAGAAACAGTCTTTAGAAGTATAACTGACCTTTATTCCTGATGGGAAGAGTGGTGGCAACATTGGCAGGTGGTTTGTCAGGCTCCTGAGGTGGAACAACCATGGGCAGTGCTTGAACTGGTACACGAGGAGCCTAAGACAAAGGACACTAAGTGACTATTAGTGTCCTAC-ACAATCCATTAAG----TAATATGCTCTAAATAAAG------AATAAATTAGAGATTTTT---------------TGACAATATTTTTAATATGTCATCTTAGACAAT-GACA--------------------TATTTACTTAAAATATG-----TTGGCACCAAATTGTTTACCACGACATTTTTTAGTAGG-------------CTTTGA--------ATTCAAGTTGTGACCTTTAAAAGCTA-AAGCATAATCATA----------TCATCTAGGATCTGAATATTGT-ACCAGATGTTCATTAACTGTATCAAGTACATATTTACAAAC-------AGAACTACATATTAGAACAAAAAAAA-----ACCCTAATTTAAACAG---AAACTGTAAGTGAA-----------AGAATTAGGATAAAGAAGACATACCATA-------AAATGCTTTAATTTTTA-------------------------------------------------------AAATCTTACCCTATTTAAATCGTGGGATGGGGGAGTTAACTGAGTGACATCTGGTGGAGGGGCTGAAAGCAAGTTATTAGGATAATCCAAGAGATAGCAAACAACACTTGTATGGCCACCTTTTGCTGCTTCTATCAACATAGTTGAGCCATCCTAAAAGAGTGAATATGGAAGGGGAAAAAAAGTG---AAGAAAAATAAGTTAG------------TTTACAGAATCACTTAGGAAGATAAAG-CCAACAGGTCCCAGACGCATTAAAATCATAGGTTTGGTAAAGAACGCTTCAAG--------------TGAAAAAGGAGAAAATTTACA-CTTAGAATGCCATTATGAATGGAACTTGTACATGATATGTTGTAACAATGACCAAGAGAGAAATACTAATTCACAATTCTGCAC-----------------AAACATTTGAGTTACATACTTTCAAACGGTGAGTAGGATCTGCCCCATGAGCCAAAAGTAGTTCCACCACTGCCAGATGACCCCCTGCACAAGCCAGGGACAGTACAGTATGGTCATTATTAGCTGTGGTTCTATTCACATTCGCTCC-TAAAACAGAAAAGGCATGGA chr4 + 94230402 52267724 52267723 52269009 52267724 52267723 52269009 1286 AGAAAATAAGCTCCAGAACTAAAACTGACCTTTATTTCTGATGGGAAGGGTTGTGGCGACATTAGCAGGGGGTTTGTCAGGCTCCTGGGGTGGGACGACCATGGGCAGCGCCTGCACTGGTACACGAGGAGCCTAAAATGTTGGATACTAATAGATTATTTTTCTCATACTCCAATCTAGTGATAGTTCAATAGAAGGTAAACAAAACCTGTTAGAAAAGCAGACGTTTGTGGTAACTAACAACATTGAAGACATTTTAAATATGCTGAGTTCAACAGTTAACAGTTTGAAATCATCTAGCTTCTATATGCTTCGAATTTGAAGCCTAAGAAATAACTCGGGTAAGAATACTCATCTCTGTATGGCACAGTGCTACACTCTGATAAAGCAAATACAAGCCACAGC------AGGCTACAAACATAATTCTGCAGAACAGCCTCACTAAAG--CTGACTTCAGTTGCTGGCTTCTCTTTTTTTTTTTTTAATG-ATCTTTGTAGATGAACAGAAGGACTACACAGCAATGCTCAGAAAACTTTCACCATCTTTACAACAGCTCAGATTTTCAATGCATTCCCTACAGTACAACAGTGTAAGAAATGACACACCTGACTCTTCTGTATGTTTCAATTTTGACTAAGCTGCAAGAAGAAATGCAAACAAAGTCCCGCAAATCAAACCACTAGACCTTAAATCTTACCCTATTTAAATCATGGGATGGCGGGGTCAGCTGGGTAGCATCAGGTGGAGGAGCAGAAAGCAAGTTGTTTGGGTAGTCTAGAAGGTAACAAACCACACTGGTGTGACCACCCTTCGCTGCCTCTATTAACATAGTCGATCCATCCTGAAGAGGCAAAGATCACAGTATTAGCAAAGAGTATAATCAAAACATGACAATGTTGAAATGTTTTGACAGACCCAACAAAATACATGAAGACTTAAATATTCCAACTGCAGCAAGTCCACAACTAAACGTAAGAACTCTACAAAAAATACCCAACAATTAAAAAAAAAAGCAATCAATATTTTAGTTTTCCTTCAACTAT-GACCTTACAACTG---TGCTGTGATTTAAAGCAGCAGGCAGTTAAGCACACACAGCTGTTCTCTCACTCAGACGAAAATAAGGCAGTGGAGTGACAAACCTTCAATCTGTGTGTAGGATCAGCACCGTGAGCTAGCAGTAACTCCACAACCGCCAGATGACCTCCAGCACAGGCCAGTGATAACACTGTATGATCATTGTTAGCAGTAGTCCTGTTCACATTTGCTCCTTGAAAAAGAGAGCGCAAAGA .::...:.:x..::....x..x..............:...........:..x.....:.....:.....x.................:.....:..:...........:..:..x.....................:.::xx...:.....xx..:....xx.x..x...-x.....:.x.:.x----:....x:xxx....:...:------.:x...x:...x:...x.---------------...x:.:.....x......:::xx..x:...:.-:...--------------------...x.:...x:...x..-----.x:.x.x:..x.:.xx..xx.xx..x:x.:.:x...x.-------------..:...--------..x....::::::.------.:....-..:......:x.:----------...::x.:.--....x.x:x..-:.::.x.x:..x..xx:.x.x.:x.:.:-..x...::.:.:-------..:......:.x:.:x:.xx.:....-----...x.xx..xx.....---.:.:.x.x.:..x.-----------.x..:x:x.xx.:.:.x....:...xx.-------:x...:..:......x.-------------------------------------------------------.....................:........x..:..:.:...:..::....x........:..x...........:..x..:..:..:.::..:..:.....x.....x..:..:.....:..:.....:.....:........:..x.......:..:::.::..x..x:x..x:xx.:x....x.---..xx....:.x.x:.:------------..x.....x:..x:x.::x.x..:...-.:x.x.x:.:...:x:...x:..:x:..:.:x.xx:xxx......x..x...:--------------.:.....::.::x...:x.:.-:....xx.x..x.:.xxx..-..x...::.xx..---..:...:.:xxx:.x..:x..:x.:x..xxx.:x....::.x.x.x.-----------------.::..x.x....x...x..:.....x.x...x........x..x..:.....:.:x....::.....x..:...........:..x.....:.....x..:.::..x.....:.....:.....x..:..:..:........:.....-.:...x...:.:x...x:.. 170M1I13M4I19M6I18M15I33M1I4M20I17M5I38M13I6M8I14M6D6M1I13M10I9M2D11M1I28M1D12M7I26M5I16M3I14M11I28M7I17M55I187M3I16M12I27M1I53M14I21M1I20M1D13M3D47M17I148M1I20M 711/1064 66.8% 1286/94230402 0.0% 235/1064 22.1% 20873988 NA +7741 chr4 + 190214555 73144730 73144729 73144867 138 TTTATACAA-ACCTACCTTTACTAATTAAGAACTGAACAGTACAAACATGACCAGCTCTTGCAGCTTTCATTAAAGGAGTTCTTCCACCTTCAGATTCATGTTCCTGTTTAAAAAAAAAAAAAAAGACTTGACATTTAA chr4 + 94230402 52269852 52269851 52269987 52269852 52269851 52269987 136 TTCACACAATACTCACCTTTGCTAATCAAGAACTGAACAGTGCAAACATGACCTGCCCTTGCAGCTTTCATGAGAGGAGTTCTTCCACCTTCTGATTCATGCTCCTA---GAGCAAATTAACGAACACTTTGTATTCAA ..:.:....-..::......:.....:..............:...........x..:..............x.:..................x........:....:---:.:x...xx..x:..x....x::...:.. 9M1I97M3D29M 109/135 80.7% 136/94230402 0.0% 4/135 3.0% 20874878 NA +21890 chr4 + 190214555 73146714 73146713 73147442 729 ATTAATTTCT-TATTGTTAAATATTAAGATTTAAAAAGTAACATAGCTTACCAGATCTGCGCCTGCCTGAAGTAAGACATCTGCTACATCAGTATGACCATTTTCACAGGCATATGTTAGTGCTGTATCCCCTGTTGCTGTTGTTGCATGAACGTTAGCTCCTGTAGTAGTCAACAAATAATACATAGACTTAATAAAGGAGC-CATAAGACATATATGACGAAAATAAAAACTTCTTCTAGATAAGTCATACCTCCTCAAGTTAAACAAATTCAAA---CTTCACTCATTTCCAGAAACAGAGAATATTGTAGGCATTAAAAA---AATTACAAACAAAACTGGTTGAAATTAAAGCTGCAGATACTTCAAACAGCAGTAAGGTAAACTGTTCAGAATACATACAAAGGTATATCACACGTTTTTTTAAACTCACA---------CATTCAGTGTATCAT--AGCATCATAAAAATATTTGCA-------TTATGACATTTTTACTTAAACAAATCATG-------TAAAAAACTTCTCCC-----------------------AAATGCAAAAATGCCTACCTGCAGCTAATAAGTATTTAACTAACTCCAAATGACCCTCTTGAGCAGCTTCCATTAAAGGGGTAGAACACCCTAGTTCTATATCGGCTCCTGCCTTAATTAGAAAGTCTGCCACTTCCAGAAAGCCTCCACAGCAAGCCAGAGTCAAGGCAGTTTCTTGAGTTTCTTCTGTCTGTGCATTGATATTTGCTCCTAAAATAAA chr4 + 94230402 52270636 52270635 52271372 52270636 52270635 52271372 737 ATTAATCACTGTATTTCCACTTTATAATTTGTAAGAAGGAA-ATTACTTACCAGATCTGCACCTGCCTGAAGTAAGACATCTGCTACATCAGTATGGCCATTTTCACACGCATATGTCAGTGCTGTATCACCTGTTGCTGTTGTTGCATGCACATTAGCCCCTAAAGCAGT-ATTAACAAGCATGTAAGCTTTGT---GGAGCTCATTACA----------GAAGATATGCAATTCTCTTTATAATCTTTTACAAGATCAGGT--AGCAAACCTAACTTCCTCCTCTGAATTACAACAGCTATGAA-ATTAT-----TTAATGACTTAGCCATACGCTAGGGCAATTAAAAGAAAAAACCCTAGGACTTCA-------------------GTTC------CAAGGAAATGTACACCAACCGAGTCTTTAAAAGCTAAATTAGGTTCCAACCAGTACATTATTTAAGATTCCACCAGCCTCTGCAACCAACTTAATGAAGCTGCTAATCAGAAGCATAATGAACGTGAGAACAGACTTTTTCCTGTAAGGATACATTGAATCTGTTAAAAAAAAAAATCCATACCTGCAGCTAATAAATATTTAACCAACTCCAAATGACCCTCTTGAGCAGCCTCCATCAAAGGTGTTGAACAACCAAGCTCTATATCTGCTCCTGCTTTAATAAGAAAATCGGCAACCTCCAAAAAACCTCCACAGCAAGCCAGAGTTAGAGCAGTTTCTTGTGTCTCTTCTGTTTGAGCATTGATGTTCGCTCCTTCAAAAAA ......:x..-....x::.xx.xx...xx.x...:...x..-..x:..............:...................................:...........x........:...........x....................x..:.....:...:x..:...-.x:..xx.::.::..::...x:.---.....-...x.x.----------...:...x:x.x....::.x:xx.xx.:x...xxxx...:..--.:....:::..x---..:.x..x.x..x..:x.:.x:x...-...:.-----....x:.---.:::.:.x:.x.::x:::..:...xx...:x:x.x::x......-------------------....------..x:x...x...:.:..xx..xx.:......xx.xx.---------..x:....::..:..--.:x..:x:.xx.::x.:....-------.x....x::.x:..x.:.:.x:x..x...-------x..x.:....:.:..-----------------------...x:x......x.x................:........:..........................:.....:.....x..x.....x..x..:........x........:.....x.....:..x..x..:....:...:....................:.::...........x..:........:..x........:..:......xx..x... 10M1I30M1D129M1D23M3D5M1I7M10D42M2D12M3I26M1D5M5D7M3I44M19D4M6D37M9I15M2I21M7I29M7I15M23I220M 493/681 72.4% 737/94230402 0.0% 104/681 15.3% 20876078 NA +16998 chr4 + 190214555 73148805 73148804 73149097 293 ACGGTTACCTTGACCAAGAAGTAATGCCACCATTTCTTCATGTCCTTCTCGAGCTGCTTCCATCAATGGTGTATAACCTTCATCATTGACCTCTTCCAGGCTAGCTCCTCTTTCAATAAGTAAAGCCGCAAGTTCCACATGCCCACCACATGCAGCCAAAGTTAATGGTGACTCAAATGAATCAGCAGGCATGTTCACTTGGGCACCGCTGTCAAGAAGTAACCTAGCTACTTCAACATGGCCATCCTAATGA-TAATACAATTTAAAAAATTAAATCAGCACCATTAAAAAAA chr4 + 94230402 52271866 52271865 52272159 52271866 52271865 52272159 294 ATAGTTACCTTGGCCAAGTAGTAGTGCCACCATCTCTTCGTGGCCTTCTCTAGCTGCTTCCATTAGCGGTGTGTATCCCTCATCGTTTACCTCTTCCAAGTTAGCTCCACGTTCAATCAACAAAGCTGCCAGTTCAACGTGCCCTCCACAAGCTGCCAAAGTCAACGGAGACTCAAAGGAGTCAGCAGGCATGTTCACCTGAGCCCCACTGTCAAGCAGTAATCTTGCCACTTCCACATGGCCATCCTAGGAATTcaaacaaacaaacaaacaaaaaaaACAACAACAAAAAAA .::.........:.....x....:.........:.....:..x.......x............:.::.....:..x..:.....:..x..........:.:.......x.x......x.::.....:..x.....x..:.....x.....x..x........:..:..x........x..:.................:..:..x..:........x.....:..x..:.....x..............:x:.-.x.x....x:x..x...:x...xx.:..x..x:....... 253M1I40M 231/293 78.8% 294/94230402 0.0% 1/293 0.3% 20876939 NA +3213 chr4 + 190214555 73149727 73149726 73149807 81 CGTGGTGGTGTGCACTTCGTCCCAGCTACTCAAGAGGCTGAGGAGGGAGGATCATTTGAGCTCAGGAAGTTGAGGCTATAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......::.::x.x..:.........::.:........xxxx.x.:.x..:....:.:...:.:x..x:....:... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -2883470 -91346932 +7529 chr4 + 190214555 73151396 73151395 73151562 167 TATAAACATATTTGACATATTTCACCAAT--------------CTTACCATGCAAGCCTCCATCAGAGCAGTGTGCATTTCATCTGTTTTATGCTCTTGATCCGCGCCTGCTTCCAAAAGAAATCGCACCATCTCTAAGTGTCCTAAACCAAAAGTGTACAAGATTACTTGAAAATATTTT chr4 + 94230402 52276625 52276624 52276805 52276625 52276624 52276805 181 TAAAAAGACAACAGATATTCCTCACCAATAAATCCATGCATCTCTTACCATGCAAGCCTCCATGAGAGCAGTGTGCATTTCATCTGTCTTGTGTTCCTGGTCTGCGCCAGCTTCCAGCAAGAATCTCACCATTTCTAGATGACCTGTACAGAGAAAATACTTAATAGATAGAAACGACTTT ..x...x.:.x:x..:..x::........--------------....................x.......................:..:..:..:..:..:.....x.......:x.::....x......:....::..x...:x..x:.:.:x:...xx:..x:x.x....xx.:... 29M14I138M 122/167 73.1% 181/94230402 0.0% 14/167 8.4% 20874771 NA +18487 chr4 + 190214555 73153792 73153791 73154142 351 TATTTTTTAACTTAGAAACAAGATTACATAAAATA---------ATTATAATTTCACATATTTAAAAACTTT----GTTTTAAGAAAGG--TTTATACTGTACCTTTGTAACAAGCTAAGGTAAGGGCACTCTCTTTAAATTCATTAGAATGCGTATTAATGCCAGCCCCATTTTCTAGCAGCAATCTGGCTACTTCCACATGTCCAGCACTTCCAGCTTCCATAAGAGGGGTATGACCATTTTCATTATGGTCCTCAATACTAGCACCGGATTCCAAGAGCACCTTTACAACATCTACATAGCCTCCAGCACAAGCATATGTAAGTGCTGTATTGCCTAT--TTTAATTAGGAAAAATAAAAAGACA chr4 + 94230402 52278563 52278562 52278929 52278563 52278562 52278929 367 TATTTATAGCCTTAAAAATCA-ATTTCATAACATACAGCAAAGCAGAGTAAATACACGTTTGAAGAGACCTTCCACACCTTAGTAAAGGCCTTGGTACCATACCTTTGTAACAAGCCAGGGTAAGCGCGCTCTCCTTAAACTCATTGGAATGTGTGTTTATGCCAGCGCCATTTTCTAACAGCACTCTGGCCACTTCCACATGACCAGCACTTCCTGCTTCCATTAGAGGAGTGTGACCATTTTCATTATGGTCCTCAATACTTGCGCCCGATTCCAGCAGTACTTTCACAACATCAACATAGCCTCCAGCACAGGCATATGTAAGAGCCGTATTGCCTAGAACCAGAGCAGAAAGATTTGAAAGACA .....x.x:x....:...:x.-...x.....x...---------.xx:...x.x...:.x.xx.:.:..:..----:::...:x.....--..x:...::................:.:......x..:.....:.....:.....:.....:..:..x........x..........:.....x......:...........x...........x........x.....:..:.............................x..:..x.......:x..:..:..:........x.................:...........x..:..........x--::x:.x:..:..:.x.x:....... 21M1D13M9I28M4I13M2I250M2I25M 277/350 79.1% 367/94230402 0.0% 18/350 5.1% 20875229 NA +3079 chr4 + 190214555 73153921 73153920 73153983 63 TTAGAATGCGTATTAATGCCAGCCCCATTTTCTAGCAGCAATCTGGCTACTTCCACATGTCCA chr4 + 94230402 52272047 52272046 52272109 52272047 52272046 52272109 63 TCAGCAGGCATGTTCACCTGAGCCCCACTGTCAAGCAGTAATCTTGCCACTTCCACATGGCCA .:..x.x..:.:..x.:x:x.......:.x..x.....:.....x..:...........x... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 20881874 NA +3218 chr4 + 190214555 73154901 73154900 73154970 70 CATAGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....:--..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -2878296 -91352106 +20263 chr4 + 190214555 73155629 73155628 73156182 554 ACCTGTTGAAGACTGTGCATTAACATCTGCTTTATGAGCTAGCAGCAACTTCACAATTTTGACATGTCCTCCATTAGCAGCAGCCATTAAAGGTGTAATGTCACCTTTGATTCCCCTATCTTCCACATTTGCATGCATTGCCAACAAAACCTTATGAGAGAAAAATAGT--------TTAAAAAGATATTAGGAAATAATCGTCAAAAAATTTTGAACACGTATTTATATAACGTCTACCTAGTCATAGTAAAAGAGCTATAAGCACACAAAATTTATCTAACAAA-ACTATTTGTTGAAATAA--TCCTAATGGTTGGAAGGATTTAT-----------------TTTATTATTTCCTTAGTAAGCAAGCCAGTTTTTAAAAAAACAACAAATAAGCTTTATTTTGATAAT------------------------------------------ACGAACCTGTGCAAGCTCATAGTATCCAGCAGAACAAGCTAAACAAAGGAGGCTCTCCCCTTCCTCTGTGTGTTCATTTACACTTCGCCCTTCAATGAGTAACTTTCGCACAGCATTTACATCTCCTTCTGAACAGGCTTCTGCCAAACTGCGGCTATT---ACGGAAAGAAT chr4 + 94230402 52279955 52279954 52280562 52279955 52279954 52280562 608 ACCTGTTGATGACTGTGCGTTCACATCAGCACCATGAGCTAGCAGCAACTTGACAATTTTGACATGCCCGCCATTAGCAGCAGCCATTAAAGGTGTTATGTCTCCTTTAATACCTCGGTCCTCTACATTAGCATGCATTGCCAGAAGAACCTGTGAACAGAAGGATGATCAGCAGCCTTGGGAAGTGACAAGGC--TGAGTGTCAAGATGGTTAAAATG-----TTATACAACCCCCACACCTTCACA----AACAGTTTTATGC-TAGAAACTTTGAAAAATAAGCACAAAATGCAGCAGCAACATGCAGCTGTGTGCAAGTCTTCATCTGTCAGTTTACTGACGTTTTCCACTATCTTAACA-------CTACCTTCAAGAACATAAGAAAAAAGTGTTAATTTAACACCTACCTATTTTTGTGGAAAATGCACAAAACAGTTAAAAAAAGAACCAACCTGCGCAAGCTCATAATATCCCGCTGAGCAGGCTAAACAAAGGAGGCTTTCCCCTTCTTCTGTGTGCTCGTTCACACTTCGTCCTTCAATTAGCAACTTCCGCACAGCATTTACATCTCCTTCTGAACAAGCCTCTGCCAAGCTGCGGCTAGTCAGATAGAAAGCAT .........x........:..x.....x..x::..................x..............:..x..........................x.....x.....:..x..:.x:..:..:.....x.............:x.:.....xxx:.x....::..::.--------..:::...xx.:x...x--.:.x:.....:.x:x..x:..::-----.....:...x:.:..x:xx...:.----..x..:.x..x..-:.x...x...:xxx..:..:-..x.xx..:x.x.::..--.x.x:x..xx..x...xx..:..-----------------...x::.:.x:....::.-------.x:::..:..:..x.:..x...x...:x...x...:.:.x:------------------------------------------..x......:...........:.....x..x..:..:.................:........:........:..:..:........:........x..:.....:.............................:..:........:.........x.---.::.....x.. 169M8I17M2D23M5D24M4D13M1D20M1I17M2I23M17I18M7D41M42I159M3I11M 396/535 74.0% 608/94230402 0.0% 92/535 17.2% 20875674 NA +3693 chr4 + 190214555 73157967 73157966 73158033 67 TATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:...........::........x.xx.x...x.............:..x.xx:..:..:.. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -2875244 -91355158 +3152 chr4 + 190214555 73158135 73158134 73158216 82 AAAGAAAGAAAGGAAGAAAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAAGTAGAA chr4 + 94230402 32723434 32723433 32723519 32723434 32723433 32723519 86 AAGGAAAGAAATGAAGAAAAAAAATGGAAGAAAACCCCAAAGACAGCAAACACGTGAACAGAAGAATGAAGGAAGAAAGTGTGGAA ..:........x.........:..x.:......:----.....x..x..:x.x.x:.:x:::....x...:...::..:x..:... 34M4I48M 57/82 69.5% 86/94230402 0.0% 4/82 4.9% 40434701 NA +3103 chr4 + 190214555 73158143 73158142 73158225 83 AAAGGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAAGTAGAACATGTCATT chr4 + 94230402 49908307 49908306 49908389 49908307 49908306 49908389 83 AAAGGGGAAAAAAGAAAGAAATAAAGAAGAAAAGGATAAATAAATGAGGTAAAATGAAGGTTAAATTAGGAGGAAAGGTTACT .....:::.............x......::....:.x:..x:..x...:x.:..x...:.xx.:.xx..x..:.x.x..:.:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 23249836 NA +12884 chr4 + 190214555 73161168 73161167 73161407 240 TGATGGCAGCAAAAATGTACTTACTTGTCCGACTGCCCTGCATTTGCTGTGCTTTCAGCTCTCATACGGGTAAGTGCAGCAGCAGCTTCATCCAACGCACAACTAACAGACGATGTCAACCTCCGAAGTACTTCAGGATCTGCAAAGGCTTTACCATCAGCCGTGGACAATTTTCCTATTCCT---ATTATATTATTTTCACACCAATATGGACACACCC----AAAAGGAGAAACAAAGCAAAATT chr4 + 94230402 52281533 52281532 52281778 52281533 52281532 52281778 246 TGACAGTATAAAGCATG-GCTTACTTGTCCGTCTGCCCTGCATTTGCTGTGCTTTCTGCTCTCATCCGGGTAAGTGCAGCAGCAGCTTCATCCAACGCGCAACTGACCGAAGAAGTCAGTCTGCGAAGCACCTCAGGATCTGCGAATGCTTTACCATCAGCCGTCGATAGTTTACCTATTCCTTCCGTGATGCCAATTTGCAACAAGTTGGTACACGTGCCAGGAAAGGAGGAAACAAAAAAAAGTT ...::.:.xx..:x...-:............x........................x........x................................:.....:..x..x..x....::..x.....:..:...........:..x.................x..:.:...x.........---:.x..:::.x...xxx..x.:.xx.x....::x.----...:.::........:x...:.. 17M1D165M3I34M4I23M 189/239 79.1% 246/94230402 0.0% 8/239 3.3% 20879635 NA +3948 chr4 + 190214555 73164651 73164650 73164734 84 ACATGGTGGCATGCGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--...:.x.:....:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 9M2D73M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% -2868545 -91361857 +12220 chr4 + 190214555 73177370 73177369 73177544 175 GAGTACATACCTGCAGCTTCTAGTAAAGCTTCCAGTCTAGCCTGTGTTTCTGGATCTACTGTCCTGAGGTCTGCACCATCAGCAGTACCTGATAAGAGCAACTTGGAAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTGATCCAAAATGAAAGACTCCACCTATAAAACAA chr4 + 94230402 52282310 52282309 52282484 52282310 52282309 52282484 175 GAGTACTTACCTGCAGCTTCAAGTAAAGCTTCTAATCTTGCCTGGGTTTCTGGATCTACGGTTCTCAGGTCAGCACCATCAGCAGTACTTGACAAAAGCAATTTGGAAGCTGTTTCCAACATAGGGTTTTCAAGATCATCCTGATCCAGGATAAATGATTCCACCTGAAAAATAA ......x.............x...........:.:...x.....x..............x..:..x.....x................:...:..:.....:................:...x..:.....x.:..............::..:..x..:.......:x....:.. 175M 148/175 84.6% 175/94230402 0.0% 0/175 0.0% 20895060 NA +3212 chr4 + 190214555 73179359 73179358 73179446 88 ATAAAAAATACAAAAACAATTTTTTAAAATTATATATAT-TTTAAATTATATATATATGTGTGTGCATATATGTGTGTGTGTATATATA chr4 + 94230402 43288443 43288442 43288527 43288443 43288442 43288527 85 ATGGAAGCCACAAAGATAAAGT----AGAATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATA ..::..:x:.....:.:..xx.----.:.x..::...:.-..:...x......:..:.:.:x:.............x....:....... 22M4D13M1I49M 60/84 71.4% 85/94230402 0.0% 5/84 6.0% 29890916 NA +3075 chr4 + 190214555 73179388 73179387 73179465 78 TTATATATATTTTAAATTATATATATATGTGTGTGCATATATGTGTGTGTGTATATATATCTGTGTATATATGTATAT chr4 + 94230402 38686920 38686919 38686997 38686920 38686919 38686997 78 TTATATTTATGTTAGAGTGTGAGCATACAAATGTACACCCATGTGTATATGAATAAAGATCTGTATGTATACATACAT ......x...x...:.x.:.:x::...::x:...:..:x:......:.:..x...x.x......:.:....::..:.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 34492468 NA +3068 chr4 + 190214555 73179416 73179415 73179478 63 GTGTGTGCATATATGTGTGTGTGTATATATATCTGTGTATATATGTATATATGTGTGTGTGTG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:....:..x:.:.:...x......:..::x..........::.x.:....::.x...:.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -13454513 -80775889 +3358 chr4 + 190214555 73179420 73179419 73179525 106 GTGCATATATGTGTGTGTGTATATATATCTGTGTATATATGTA--------------------TATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTT chr4 + 94230402 68837023 68837022 68837148 68837023 68837022 68837148 126 GTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTT ..x...:.:.:.:.:::.::...:...:..::::.:.:.:.:.--------------------x:..x.x::.....:.............:.:.:.x...:...:...:.:..::.:.:x..... 43M20I63M 66/106 62.3% 126/94230402 0.0% 20/106 18.9% 4342397 NA +3062 chr4 + 190214555 73179444 73179443 73179496 53 ATATCTGTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ....x.::...:...:.....x..........x...........x.:x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 66321834 NA +3119 chr4 + 190214555 73179461 73179460 73179525 65 TATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x:..x.....x...............:...xx..:..x::...:....:..x...:x.x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -12655072 -81575330 +3336 chr4 + 190214555 73179464 73179463 73179523 60 ATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTT chr4 + 94230402 85834538 85834537 85834597 85834538 85834537 85834597 60 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ..x.....x...................xx..:..x::...:....:..x...:..x... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -12655074 -81575328 +3242 chr4 + 190214555 73179496 73179495 73179591 96 ATATATATATATATATATATATATTTTTTTTTTTTTTTTTAAAGAGACATGGATAGTCTCACTGTGTTGCCCAAGCT-GGCCTCAAACTCCTGGGAT chr4 + 94230402 24792626 24792625 24792719 24792626 24792625 24792719 94 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCAT---TGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCCCTGGAAT ...................x:.x......x.........:...:xx:...---.:.x:.:x:x.x....x:.x.x..-:::.....x.:.....:.. 50M3D24M1I19M 66/93 71.0% 94/94230402 0.0% 4/93 4.3% 48386870 NA +3850 chr4 + 190214555 73181908 73181907 73181990 83 CATGGTGGTGCACTCCTATAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTAAACCCGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........x--.:..:.:...........:.........x.xx.x...x.....:.....:.:..x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -2851289 -91379113 +3016 chr4 + 190214555 73182033 73182032 73182119 87 GCAAGACTCCGTCCCCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAAGAAAGTATTCGAAAATATTT chr4 + 94230402 46597860 46597859 46597946 46597860 46597859 46597946 87 GCAGTGCTCCCTCCCCACCAAAGCAGAAAAAAAAAGAGAAGGAAAAACTAAGGCAGTGATTCTCAAGGAGAAAAATTGCATTTATTT ...:x:....x...........:x.:.........:.:..::.....xx..::x.:x:.x.:.x..:..:.:x.x.:.x.xx..... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 26584173 NA +3134 chr4 + 190214555 73182035 73182034 73182124 90 AAGACTCCGTCCCCACCAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAAAAAAAAAATTTAAAAGAAAGTATTCGAAAATATTTTATTT chr4 + 94230402 5872031 5872030 5872122 5872031 5872030 5872122 92 AAAACACCTTTTCCTCCAGAAAAAAAAAAAAAAAAAAGAGAATTAAGGTTGAAAAAAATATATAAAAATCAATGTTTTATCCTTTTTCATTT ..:..x..x.::..x...:..................:.:..--..::xx:.......x..x.....:xx.:.:..:x.xxx.x...:.... 42M2I48M 62/90 68.9% 92/94230402 0.0% 2/90 2.2% 67310004 NA +3675 chr4 + 190214555 73190239 73190238 73190311 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x...........:.:..x:xx:.....:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -2842966 -91387436 +3094 chr4 + 190214555 73191329 73191328 73191381 53 CAAAAAATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857604 6857603 6857656 6857604 6857603 6857656 53 CAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ...:.........:..:::.::..:.:x:.........x...........x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 66333725 NA +3214 chr4 + 190214555 73211718 73211717 73211807 90 GTGCCTGTAATCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTCGCAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.x....:.:........x..::........x.xx.x...x...........:.:..x:xx:..::.:..------:.x...:..... 72M6D12M 58/84 69.0% 84/94230402 0.0% 6/84 7.1% -2821488 -91408914 +3797 chr4 + 190214555 73218931 73218930 73219003 73 TGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:.::........x.xx.x...x.............:..x:xx:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -2814274 -91416128 +3706 chr4 + 190214555 73225725 73225724 73225804 80 AGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x:..--....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 11M2D67M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% -2807475 -91422927 +3064 chr4 + 190214555 73249727 73249726 73249816 90 GCGCCTGTAGCCCCAGCTACCTGGGAGGCTGAGGCAGAAGAATCACTTGAATCTGGAATGCGGAGGTTGCAGTGAGACGGCATGGCGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x.....::........:..::........x.xx:x...x........:.::...xx:xx:..:..:..------::....::.... 72M6D12M 56/84 66.7% 84/94230402 0.0% 6/84 7.1% -2783479 -91446923 +3134 chr4 + 190214555 73250586 73250585 73250647 62 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAAAAGAGTTGTTTTTAAAGACACTAA chr4 + 94230402 28185853 28185852 28185914 28185853 28185852 28185914 62 TCTCCAGAAAAAGACTGAAAAAAAAAGAAAAAGAAAAAAGCAGTTATGTTAGGAGATACTAA ....x.:.....:.xx:.........:...x........:x....:.x..x::...:..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 45064733 NA +3013 chr4 + 190214555 73301070 73301069 73301115 46 TTCTTTTTCTTTTCTTTTTCTTCTTCTTCTTCTTTTTTTTGAGACA chr4 + 94230402 54936179 54936178 54936224 54936179 54936178 54936224 46 TTCTTTTTCTTTTCCTTTTCATGTTTTTCTTTCCTTTTGTGAGACA ..............:.....x.x..:.....:::....x....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 18364891 NA +3809 chr4 + 190214555 73314787 73314786 73314869 83 CATGGTGGCTTGTACCTGTGGTCTCAGCTACTTGAGAAGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGGTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..:..x...:..::...........:.:......x.xx.x.:.x.......:.....:..x..x:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -2718410 -91511992 +4006 chr4 + 190214555 73318639 73318638 73318785 147 TCTCCCTCATTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTT chr4 + 94230402 50176269 50176268 50176414 50176269 50176268 50176414 146 TCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCT-TCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...x:....:.x..:..::.::...:..:x.:.x::.x:.:..x.x..x..::..::x......x.x.::x.:...x...-...:.......::xxxx.:.x.:.:.::x:......x::.:...::.....:....:.:.x..... 80M1D66M 87/146 59.6% 146/94230402 0.0% 1/146 0.7% 23142370 NA +3501 chr4 + 190214555 73318639 73318638 73318758 120 TCTCCCTCATTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .::.:...x....:xx:x:.:.:.....:....:.:x..::.:.x....xx....--.x....xxx:::..x....:..x.xx...:.:....:.:.::.:........:....:.x.:. 55M2D63M 73/118 61.9% 118/94230402 0.0% 2/118 1.7% 9621517 NA +3518 chr4 + 190214555 73318643 73318642 73318766 124 CCTCATTTCTTTC-TCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.:...:..:..-.:..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x..:.:..x.xx...:..--....:.:.::..........:....:.x.:. 13M1I78M2D31M 77/122 63.1% 123/94230402 0.0% 3/122 2.5% 9621526 NA +3773 chr4 + 190214555 73318648 73318647 73318770 123 TTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x..:.....---.....:xx:x..:.:.....:....:.:x..::.:.x....xx....--....xxx.::.:x..:....x.xx.:.:.....::.:.::..........:....:.x.:. 12M3D47M2I61M 79/120 65.8% 122/94230402 0.0% 5/120 4.2% 9621530 NA +3355 chr4 + 190214555 73318649 73318648 73318762 114 TTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697128 63697127 63697239 63697128 63697127 63697239 112 TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC--CCCTCTTTTCTTTCTTCCTTTTTATTT .:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.:..x.xx..........--:.::::..........:....:.x.:. 85M2D27M 70/112 62.5% 112/94230402 0.0% 2/112 1.8% 9621521 NA +3204 chr4 + 190214555 73318653 73318652 73318748 96 TTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.......:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:......:.:::..:...:.:.::..:...x... 59M4I37M 61/96 63.5% 100/94230402 0.0% 4/96 4.2% 9621513 NA +3540 chr4 + 190214555 73318659 73318658 73318784 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx...:.x....xxx.::..x..:.:.:x.xx.......:..:::::..:.:.:...::....:.x.:. 13M3D110M 75/123 61.0% 123/94230402 0.0% 3/123 2.4% 9621542 NA +3086 chr4 + 190214555 73318670 73318669 73318761 92 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTC----TCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895607 32895606 32895702 32895607 32895606 32895702 96 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ........:..x.:...:::.x.:x:.:...x.x...::.x..xx:...x..----....:.:x:..:.:...x:.x......x.....:...... 52M4I40M 61/92 66.3% 96/94230402 0.0% 4/92 4.3% 40423063 NA +3323 chr4 + 190214555 73318674 73318673 73318800 127 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-TCTCTCTTTCTTTCTTATTTCTTTCTGACAA chr4 + 94230402 32895607 32895606 32895734 32895607 32895606 32895734 128 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTTATACATTTGTGCTAA ........:..x.:...:::.x.:x:.:...x.x...::.x..xx:...x..xx:x....:.:x:..:.:...x:.x......x.....:......-x:..x.x.x:..:.....x:x...x..x:.. 96M1I31M 79/127 62.2% 128/94230402 0.0% 1/127 0.8% 40423067 NA +3318 chr4 + 190214555 73318702 73318701 73318788 87 TCTTTCTTTCTTTCTCTCTCTC-TCTTTCTCTCTTTCTCT-CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTATT chr4 + 94230402 57372027 57372026 57372115 57372027 57372026 57372115 89 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATT .:.......::..x..:..x..-..:.....:....xx..-..x.:.........:...::...x.....x:.xx..x.:.:..x.... 22M1I17M1I48M 63/87 72.4% 89/94230402 0.0% 2/87 2.3% 15946675 NA +3008 chr4 + 190214555 73318744 73318743 73318808 65 TCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTATTTCTTTCTGACAAAGGGTATT chr4 + 94230402 56907959 56907958 56908023 56907959 56907958 56908023 65 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTT ..:x:.:..:::..:.:.x.::.:...........:...:..x.......:..:...:..x.x.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 16410785 NA +3339 chr4 + 190214555 73333945 73333944 73334042 98 TTTCTTTTCTTTTTCTTTTTCTCTTCCTTTCCTTTCCTTTTATTTTATTTT-TATTTATTTATTT------ATTTTTGAGACAGCATCTTACTCTGTCGCCTAGG chr4 + 94230402 62204783 62204782 62204887 62204783 62204782 62204887 105 TCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTTTTGTGTGTATGTGTTTTGTGGGTCTTTTTAATCATCCCCTCACCCTATCTCAGAGG .:.::..:....x....::.:.....:...:..:..........:.:....-.:.x...x.:...------x:....x.:x..x.x:..:..:..:..x.xx... 51M1I13M6I34M 67/98 68.4% 105/94230402 0.0% 7/98 7.1% 11129162 NA +3089 chr4 + 190214555 73343041 73343040 73343120 80 AAGATGGAGAGACAGTATTATTTCTTTTCTTTTCGTTTCTTTTCTTTTCTTTTTTGTTTTCTTTTCTTTTTTTTTTTTTT chr4 + 94230402 53879502 53879501 53879581 53879502 53879501 53879581 80 AACATGGTTAAAAAATGCTACTGCTATTCTCTTCATACCAATATTCTTCTTTTCTGTTTTCCTTTCTTTTCATTTCCCTT ..x....xx.:.x.:.::..:.x..x....:...:.x:.xx.x:.:.......:.......:........:x...:::.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 19463539 NA +3084 chr4 + 190214555 73343067 73343066 73343127 61 TTCTTTTCGTTTCTTTTCTTTTCTTTTTTGTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 65914874 65914873 65914934 65914874 65914873 65914934 61 TTCTTTCCTGTTCTTCTCTTTACTTCCTTGTTTTCACTGTTTTATTTTATTTTTTTGTCTT ......:.xx.....:.....x...::........x:.x:...x....x.......x.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 7428193 NA +3718 chr4 + 190214555 73346726 73346725 73346804 79 GTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -2686475 -91543927 +3116 chr4 + 190214555 73406078 73406077 73406113 36 TCTCTTTAAAAAAAACAAAACAAACAAACAAAAAAA chr4 + 94230402 22392447 22392446 22392482 22392447 22392446 22392482 36 TCTATTTAAAAAAAACAAAACAAACAAACAAAAAAA ...x................................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 51013631 NA +7082 chr4 + 190214555 73408558 73408557 73408835 278 CTGTCCAGCAA-----CTGAAACCTGCTTTCTTCCATTTAGCATACCCTTTTTGGAGACAAATTATGCACAGTTGCAACTCTTCGTGAAACCTATGGTGAAATGGCTGACTGCTGTGCAAAACAAGAACCTGAGAGAAATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCG---ATTGGTGAGACCAGAGGTTGATGTGATGTGCACTGCTTTTCATGACAATGAAGAGACATTTTTGAAAAAGTAAGTAATCAGATG----TTTATAGTTCAAAAT chr4 + 94230402 52348313 52348312 52348602 52348313 52348312 52348602 290 CTTTCTAGCAATGATTCTGACTCTCATCATCTCCCTTATAGCCTTCCATTATCCTGGATGAAATCTGCCAAGTGGAAAAGCTCCGTGACTCTTATGGTGCAATGGCCGACTGCTGTAGCAAAGCTGATCCTGAAAGAAATGAGTGTTTCCTGTCATTTAAAGTTTCCCAACCAGACTTCGTTCAGCCATACCAAAGACCAGCTTCTGATGTGATATGCCAGGAATACCAGGACAACAGAGTGTCATTTCTGGGACAGTAAGAAAAATGATGATGTTGCATTGTTCAAAGT ..x..:.....-----....xx.:::::x...:..x.x....x.x..x..x.:xx:..::..x.x...xx...x.x..xx..:.....xx.:.......x......:.........:xx...xxx..x.....:........:..:...:..:x.:x:....x.xx.x.x...:..:..x::.:---..xxxx:.......xxx:.........:...xxx.xx.x:..x.....:::..x.x.....:..::.x......x..xxx....----.x:..x.......:. 11M5I168M3I84M4I15M 179/278 64.4% 290/94230402 0.0% 12/278 4.3% 21060245 NA +3013 chr4 + 190214555 73408658 73408657 73408703 46 CTGACTGCTGTGCAAAACAAGAACCTGAGAGAAATGAATGCTTCTT chr4 + 94230402 52372785 52372784 52372830 52372785 52372784 52372830 46 CTGACTGCTGTGCTAAAAAGGACCCTGAAAGAAACGATTGCTTCCT .............x...x.:..x.....:.....:..x......:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 21035873 NA +5922 chr4 + 190214555 73411984 73411983 73412130 147 TTTTCTTTTTAGGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGTAAA chr4 + 94230402 52374644 52374643 52374790 52374644 52374643 52374790 147 TCTTCATTTTAGGAAACTTGTGCAGATAAGCCAAAGATTCCCTAAAGCTGATTTTTTTACCGTTACCAAACTTGTGTCGGATATTGCTAACATGCACAAAGACTGCTGTCGTGGAGATATGCTGGAGTGTATGCGTGACAGGGTAAA .:...x.......:x.x.x.:x.:xx.:.....:.....:..:........x...x:x:xx...x....::.x...x.:...x..:.:..x:.x....x:..x.....:.:.......x....x..:...::xx:............ 147M 100/147 68.0% 147/94230402 0.0% 0/147 0.0% 21037340 NA +3161 chr4 + 190214555 73447262 73447261 73447340 79 TGTAATTTCTTCTTCTTTCCTTCCTCCTTCCTCC-ATCCCTCTCTATTTCCCTTTCCCCTTCCTTCTTTCCTGGCCTTTT chr4 + 94230402 57538442 57538441 57538519 57538442 57538441 57538519 78 TGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCC--TCCTGGGATTTT ...x.:..:........:x..:............-:.:x:.:...x..:.::.x.:....:...:.--......xx.... 34M1I31M2D12M 56/77 72.7% 78/94230402 0.0% 3/77 3.9% 15908820 NA +7330 chr4 + 190214555 73447365 73447364 73447680 316 CCCTCCCTCCCCTT---TCTTCCTTTTTCT------AAAGCTGGCTTTGAGATCCT--TTATTAAAGAATA-AATCTT-TAAAACTTATACTTTATTTTCTCTG--TTGCAGGAAAAAATCATGTCCTACATATGTTCTCAACAAGACACTCTGTCAAACAAAATAACAGAATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATAATTCATGCAGAAAATGATGAAAAACCTGAAGGTCTATCTCCAAATCTAAACAGGTTTTTAGGAGATAGAGATTTTAACCAATTTTCTTCAGGGGAAAAAAATATCTTCTTGGCAAGGTAA chr4 + 94230402 52375286 52375285 52375613 52375286 52375285 52375613 328 CCCTTCCTCCCTTTGAGTGTCCCCTTCTCTGCCTGTAAAATGGGGATAACAATGCTGATTACAAAAGACCACAATCTGATTAAACTT---CCTTCCCTTCTTTGCTTTTCAGGAAGAAATTCTACACTATGTCTGCACCAACCAAGACGTCATATCAAGCAAAATTAAAAAGTGCTGTGAAAAGCCACTGCTCCAAAGAAGTGAATGCATTGTTAATGCAGAAAATGATGACAAACCTGCAAACTTGTCTCCCCAAGTCAGAGAGTTTATAGAAGACAAAGGAATATGTGAACGCTTTGCTCAGGAAAAAGATACCCACTTAGCCAGGTAA ....:......:..---.x.:..:..:...------...::x..xx.x:x:..x..--...:x.....x:.-.....x-.x......---.:..x::....:..--..x......:....:x.::x...::.x..:x.:x.x......:::x.:....:......x.x.:.:.....::..xx.x.xx:...xx..x.x:..x....:..x:..x................x.......x.::::.:.....xx.xx.x.:x::....x...:...:.:..:xx.xx::x..:x:.:.x.xx:.......:...:.:x...:..x...... 14M3I13M6I20M2I13M1I6M1I8M3D14M2I225M 201/313 64.2% 328/94230402 0.0% 18/313 5.8% 21072079 NA +5592 chr4 + 190214555 73449324 73449323 73449473 150 ACATATTTCAGTTTTGTTCATGAATATTCAAGAAGACATCCTCAGCTTGCTGTCTCAGTAATTCTAAGAGTTGCTAAAGGATACCAGGAGTTATTGGAGAAGTGTTTCCAGACTGAAAACCCTCTTGAATGCCAAGATAAAGGAGTAAGT chr4 + 94230402 52376431 52376430 52376580 52376431 52376430 52376580 150 ACATATTGCAGGTTTCTCTATGAATATTCCAGAAGACACCCTGAATTTTCTGCTCAAATGCTTTTAAGAATAGGTAAAGGATATGAGGATCTACTGGACGAGTGCTGCAAAACTGGCTCTCCAGACAACTGCTGCAGCAGAGGGGTAAGT .......x...x...x.::..........x........:...x.::..x...:::x.:.:x..:.....:.x.x.........:x....x:..:....x:....:.x.x.:....:xxx:..xxx::.x...::x:::.:...:...... 150M 98/150 65.3% 150/94230402 0.0% 0/150 0.0% 21072893 NA +5627 chr4 + 190214555 73449329 73449328 73449473 145 TTTCAGTTTTGTTCATGAATATTCAAGAAGACATCCTCAGCTTGCTGTCTCAGTAATTCTAAGAGTTGCTAAAGGATACCAGGAGTTATTGGAGAAGTGTTTCCAGACTGAAAACCCTCTTGAATGCCAAGATAAAGGAGTAAGT chr4 + 94230402 52353615 52353614 52353759 52353615 52353614 52353759 145 TTTCAGGTTCGTTTATGAATACTCACGAAGACACCCTGAGTTCTCCATACAGCTTATTATGAGAATTGCCAAAGGATATGAATCACTTCTGGAAAAGTGCTGCAAAACTGATAACCCTGCTGAGTGCTACGCAAATGCTGTAGGT ......x..:...:.......:...x.......:...x..:.:x.::.x:x:x.x...x.:...:....:........:x.:xx::.x:....:.....:.x.x.:.....x......x:...:...:.x.xx..x.xx...:.. 145M 97/145 66.9% 145/94230402 0.0% 0/145 0.0% 21095714 NA +5787 chr4 + 190214555 73450592 73450591 73450787 196 TAGTTAAAAAATGCTTCTTTCAGGTTTCTCGTTGCTTACACAAAGAAAGCCCCCCAGCTGACCTCGTCGGAGCTGATGGCCATCACCAGAAAAATGGCAGCCACAGCAGCCACTTGTTGCCAACTCAGTGAGGACAAACTATTGGCCTGTGGCGAGGGAGCGGTGAGTGTCTGCTTGGTTTGGTCCCATCTCATTT chr4 + 94230402 52378656 52378655 52378848 52378656 52378655 52378848 193 TATTAAAGAAATTATCATTTCAGGCTTCTCCTGAGCTTCACCAAGAAGATGCCTCAGCTAACATCTGCAGAGCTGATAAAATTCACCAAGCAAATGACTACAATTGGCTCCAAATGCTGCCAGTTGAGCCAGGACAAGCTATTGCCTTGTGCTGAGGAAAATGTGAGT---TTGTTGGTTTTTTGTTTTCTTACTT ..x.x..:....xx.:x.......:.....x.x:x:.x...x.....:::x..:.....:..x..xx.:........::xxx......::x.....:.x:.x.:x.xxx...xx..:.....::.x..:x.......:......x.:....x:....:.:xx......---.xx.......xx.x::x...:.:.. 168M3D25M 124/193 64.2% 193/94230402 0.0% 3/193 1.6% 21071936 NA +6415 chr4 + 190214555 73452379 73452378 73452629 251 TTTTTCTCATTCTCCTAACCAGGCTGACATTATTATCGGACACTTATGTATCAGACATGAAATGACTCCAGTAAACCCTGGTGTTGGCCAGTGCTGCACTTCTTCATATGCCAACAGGAGGCCATGCTTCAGCAGCTTGGTGGTGGATGAAACATATGTCCCTCCTGCATTCTCTGATGACAAGTTCATTTTCCATAAGGATCTGTGCCAAGCTCAGGGTGTAGCGCTGCAAACAATGAAGCAAGAGTAAG chr4 + 94230402 52379220 52379219 52379470 52379220 52379219 52379470 251 TTTTTCACCTCTTCCTGTAAAGCTGGATCTTGTGCTTGGAGAAATTTGTAGAAGACACCTGACCAATCCAATAAACCCTGCTGTTTGCCACTGCTGTAGTAGCTCCTATGCTCTCAGGAGGCCGTGCATGGGCAAACTAGAAATTGATGAGAATTACGTGCCCTTATCATTAACACCTGATCTATTCACCTTCCATGAAGACTTGTGTACAACTGAAGAAGAAAAGTTACAGCACAGGAAGCAGGAGTAAG ......x.x.::....:xxx..x:x..:x..:.xx.:...x.xx.x....xx.....:xx:.:x.x....:.........x....x....x.....:.x.xx:..x.....:xx.........:...x.x:...:x:.:.x::.x.....:.xx..:..x..:::xx....xx.xxx...:xx:....::......:.:..::....:xx.:..x.:.:x.x.:x.:.:..:xxx.x......:....... 251M 152/251 60.6% 251/94230402 0.0% 0/251 0.0% 21073159 NA +3087 chr4 + 190214555 73461006 73461005 73461066 61 CCTTTCCCTTCTCCCCCTTCTTCTCCCCCCCACTTCCCCTCCCCCTCCCCTTCCCTTCCCT chr4 + 94230402 7218317 7218316 7218377 7218317 7218316 7218377 61 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT .:...:::..:..::::x..:.:.......:x.::.......:..:...x...:....... 61M 41/61 67.2% 61/94230402 0.0% 0/61 0.0% 66242689 NA +3032 chr4 + 190214555 73461078 73461077 73461126 49 TCCTCTTCCTCTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTC chr4 + 94230402 51335344 51335343 51335392 51335344 51335343 51335392 49 TTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC .:...x.:....::..x...:......:..:..:........:...... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 22125734 NA +3140 chr4 + 190214555 73463720 73463719 73463800 81 GTGCACCTGTAATCCCAGCTACTGGGGAAGCTGAGGCAGGAGAATTGCTTGAATCTGGGAGGCAGAGGTTGCAGAGGTTGA chr4 + 94230402 76033204 76033203 76033284 76033204 76033203 76033284 81 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGA ......x....:.:.........x.::.:......x.xx.x...x::......:.::.:..x:xx:..:..:...:xx... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -2569484 -91660918 +3098 chr4 + 190214555 73478982 73478981 73479037 56 TTCTCTTTCTTTCTTCAGTGTATGGATGTATATGTATGTATGTATGTATGTATACT chr4 + 94230402 60168485 60168484 60168540 60168485 60168484 60168540 56 TTTCCTTTCTCTTTTCTGAGTACGTGTGTGTATGTATGTATGTATATACACACACT ..::......:.:...x.x...:.x:...:...............:..:::.:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 13310497 NA +3348 chr4 + 190214555 73484409 73484408 73484531 123 TTTCTTTTCCTTTTATCTTATGTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGT-----TTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x..:::..::.x..:x:...-----.........:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...::.x.::...........:..:..x:.. 23M5D58M4I37M 75/118 63.6% 122/94230402 0.0% 9/118 7.6% 9787291 NA +3727 chr4 + 190214555 73484423 73484422 73484547 125 ATCTTATGTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCTTTTTT chr4 + 94230402 63697116 63697115 63697239 63697116 63697115 63697239 124 ACTTTATTCCTCTCCTTTCCGGTGTTT-TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .::....x:..:..:..::.xx.x...-.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.....:xx.:.:.:...:.::.....::..::......:..x... 27M1D97M 76/124 61.3% 124/94230402 0.0% 1/124 0.8% 9787307 NA +3770 chr4 + 190214555 73484432 73484431 73484562 131 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCTTTTTTTTTTCTTGAAACAGA chr4 + 94230402 63697117 63697116 63697246 63697117 63697116 63697246 130 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGA ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:.:.:....x:xx.::..:::.:.::.....:...::..::.....x..x..:x... 13M1D117M 79/130 60.8% 130/94230402 0.0% 1/130 0.8% 9787315 NA +3268 chr4 + 190214555 73484434 73484433 73484551 118 TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCTTTTTTTTTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:.:::.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:x...x:xx.:.:.:::.:.::.....::..:....:.....x... 118M 68/118 57.6% 118/94230402 0.0% 0/118 0.0% 9787312 NA +3189 chr4 + 190214555 73484448 73484447 73484542 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx.:::..........:.:.:x:.:xx:.:::.....x.x..:....x.....::..::.:.:.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% -9842486 -84387916 +4626 chr4 + 190214555 73485568 73485567 73485724 157 AAGGAGAAAGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGGGGAGGAGGAGGAGGAGGAGGAGGTGGAAGAGAAGGAGGGGGGGAAGGGAAGGAGAAGGGGAAGGGGAAG chr4 + 94230402 30683307 30683306 30683458 30683307 30683306 30683458 152 AAAGGGAAAAAAAAAAAAaaggaaggaaggaaggcaggcaggaag-----gaaAGGGAAAAAAAAGAAAGAAAACAACAAACACCATCGCGAAAGAAACCCTAAGTGGGTTTGGGAGGGAGCAAGGGGTGGAGGGGAAGGAGGAGAGGAAAGAGAGG ..:.:....:.:..::.:.....::::......:x:::x......-----...:::...:........::::..x..x..:x.xx.xx.x:::..:.:xxxx.:.x..:xx...:..:..:x:.....x...:.........:..:....:.:..:. 45M5D107M 92/152 60.5% 152/94230402 0.0% 5/152 3.3% 42802261 NA +3033 chr4 + 190214555 73485581 73485580 73485659 79 AGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGGGGAG chr4 + 94230402 35548760 35548759 35548838 35548760 35548759 35548838 79 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAG ..::.x..::.......x.....x.:..........x....x...:....xxxx...:.x.x:x::....:x..:x... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 37936821 NA +5697 chr4 + 190214555 73491821 73491820 73492097 277 AAGAAAACCCAGCCTGAAAGTAAAATAATCTCTCATTCTTATTTGGTACAGAGCAAGGTTATGAACCATATTTGTTCAAAACAAGATTCTATCTCCAGCAAAATCAAAGAGTGCTGTGAAAAGAAAATACCAGAGCGCGGCCAGTGCATAATTAACTCAAACAAAGATGATAGACCAAAGGATTTATCTCTAAGAGAAGGAAAATTTACTGACAGTGAAAATGTGTGTCAAGAACGAGATGCT---GACCCAGACACCTTCTTTGCGAAGTAATATAACT chr4 + 94230402 52375348 52375347 52375620 52375348 52375347 52375620 273 AAAAGACCACAATCTGA--TTAAACTTCCTTCCCTTCTTTGCTT--TTCAGGAAGAAATTCTACACTATGTCTGCACCAACCAAGACGTCATATCAAGCAAAATTAAAAAGTGCTGTGAAAAGCCACTGCTCCAAAGAAGTGAATGCATTGTTAATGCAGAAAATGATGACAAACCTGCAAACTTGTCTCCCCAAGTCAGAGAGTTTATAGAAGACAAAGGAATATGT---GAACGCTTTGCTCAGGAAAAAGATACCCACTTAGCCAGGTAATGTGTCT ..:.:.x.x..::....--x....x.xx::..:.x.::..::..--.x...::x:.::..x.:x..:..:.:..:x.x..x.....:x::..x..x........:...:..............xx.x.:.:xx.:x.x:.:x.:.....x:....:x..:.x..x.....:.:...x:x::.:..:....:xx:..xx:..:.:....:x..x::::..::x:.:...---.....xxx....---..xxx...:...:x...x..x.:.....:.:x.. 17M2D25M2D182M3D12M3I34M 161/270 59.6% 273/94230402 0.0% 10/270 3.7% 21116473 NA +5516 chr4 + 190214555 73491881 73491880 73492090 210 ATGAACCATATTTGTTCAAAACAAGATTCTATCTCCAGCAAAATCAAAGAGTGCTGTGAAAAGAAAATACCAGAGCGCGGCCAGTGCATAATTAACTCAAACAAAGATGATAGACCAAAGGATTTATCTCTAAGAGAAGGAAAATTTACTGACAGTGAAAATGTGTGTCAAGAACGAGATGCTGACCCAGACACCTTCTTTGCGAAGTAA chr4 + 94230402 52352866 52352865 52353075 52352866 52352865 52353075 210 ATGAGCAATCTGTGCTCTCAACAAGATGTTTTCTCAGGTAAAATCAAAGACTGCTGTGAGAAGCCTATTGTGGAACGAAGCCAGTGCATTATGGAGGCAGAATTTGATGAGAAACCTGCAGATCTTCCTTCATTAGTTGAAAAGTACATAGAAGATAAGGAAGTGTGTAAAAGTTTTGAAGCAGGCCACGATGCATTCATGGCAGAGTAA ....:.x..x.x..:..xx........x:.x....x:.:...........x........:...xxx..xx::..:..x:..........x..x:.xx..:.xxxx.....x.:...x:x:...:.x:..::.xx..xx.:...:.x:.:x..x::.:.::.x......x..::x:xx..x..x.:..xx..::.x...x.x..::..... 210M 128/210 61.0% 210/94230402 0.0% 0/210 0.0% 21139015 NA +4987 chr4 + 190214555 73495294 73495293 73495438 145 TTGCAGGTTTACTTTTGAATACTCAAGGAGACATCCAGACCTGTCTATACCAGAGCTTTTAAGAATTGTTCAAATATACAAAGATCTCCTGAGAAATTGCTGCAACACAGAAAACCCTCCAGGTTGTTACCGTTACGCGGTAGGT chr4 + 94230402 52353615 52353614 52353759 52353615 52353614 52353759 145 TTTCAGGTTCGTTTATGAATACTCACGAAGACACCCTGAGTTCTCCATACAGCTTATTATGAGAATTGCCAAAGGATATGAATCACTTCTGGAAAAGTGCTGCAAAACTGATAACCCTGCTGAGTGCTACGCAAATGCTGTAGGT ..x......:::..x..........x.:.....:..x..x:.x..:....x:xxxx..x.:.......::x..:x...::..xxx..:...::...x........x..x..x......x.x.:x..:...xxxx.:..x...... 145M 96/145 66.2% 145/94230402 0.0% 0/145 0.0% 21141679 NA +6313 chr4 + 190214555 73499983 73499982 73500269 287 TTGCAACTCTTGTTGGTACAGGCAGATTTAGTTTTTGGAGAGTTATGTGGAGTAAATGAAAATCGAACTATCAACCCTGCTGTGGACCACTGCTGTAAAACAAACTTTGCCTTCAGAAGGCCCTGCTTTGAGAGTTTGAAAGCTGATAAAACATATGTGCCTCCACCTTTCTCTCAAGATTTATTTACCTTTCACGCAGACATGTGTCAATCTCAGAATGAGGAGCTTCAGAGGAAGACAGACAGGTACAAATAATCTCTTCCATTCTTCT-----TTTTCTTTGGTTTGAA chr4 + 94230402 52379222 52379221 52379512 52379222 52379221 52379512 291 TTTCACCTCTTCCTG-TAAAGCTGGATCTTGTGCTTGGAGAAATTTGTAGAAGACACCTGACCAATCCAATAAACCCTGCTGTTTGCCACTGCTGTAGTAGCTCCTATGCTCTCAGGAGGCCGTGCATGGGCAAACTAGAAATTGATGAGAATTACGTGCCCTTATCATTAACACCTGATCTATTCACCTTCCATGAAGACTTGTGTACAACTGAAGAAGAAAAGTTACAGCACAGGAAGCAGGAGTAAGGCATACCTCTTTTACTCTCTTACCCGTGTTCCTTATTTTTAA ..x..x.....x:..-..x..x::...:.x..x:.......:x.x...:..:x.x.:xx:.x:x:xx.x..x...........xx:...........:x.xxxx..x...::....:.....x...x.x.:x.:x:.::..::....:.:.xx..:.....:::.:.x..xx.x.xx...:....:.....:..:.x....x.....xx.x..x.::.x..::..:.x...x:x.:..x:x.x::...x::xxx.:.....::.:...::.-----.x...:..:x...x.. 15M1D255M5I16M 171/286 59.8% 291/94230402 0.0% 6/286 2.1% 21120761 NA +3176 chr4 + 190214555 73529869 73529868 73529921 53 TATTCCATTACCTAGCATTTCTAAAGAATGACTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53812228 53812227 53812280 53812228 53812227 53812280 53 TATTCCCTAACCCAAAATTTCTAAAATATAATTCTTTTTTCTTTTTTTTTTTT ......x.x...:.:x.........:x..:.:.:......:............ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 19717641 NA +3197 chr4 + 190214555 73535515 73535514 73535581 67 TGTAGTCCCAGCTACTTGGGAGGCTGAGACGGGAGAACCTCTTAAGCCCAGGAGGTAAAGATTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::........x.xx.x...x.x...:.:.....:..x.xx:.::..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -2497696 -91732706 +3372 chr4 + 190214555 73540611 73540610 73540693 83 CATTGTGATGCATGCCTCTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x...:....:.--.x..:.:...........::........x.xx.x...x:.........::.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -2492586 -91737816 +3245 chr4 + 190214555 73543745 73543744 73543812 68 ATATAGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAAA chr4 + 94230402 6083166 6083165 6083233 6083166 6083165 6083233 68 ATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAA .....xx.............:::...:.:.x.:..............x:x..:..:..x.x.x.x... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 67460579 NA +3000 chr4 + 190214555 73552025 73552024 73552095 71 ATGGAAGATGAAATGAATGAAATGAAGTGAGAAGGGAAGTTGAGAGAAAAAAGAATAAAAAGAAACGAACA chr4 + 94230402 63755621 63755620 63755691 63755621 63755620 63755691 71 ATGCTAGAGGAAATGAATGAAATGAATGGAATGGAAAAGTTGTGAGAAGGAAGGGGAGCAAGACTAGAACA ...xx...x.................xx..:x:.::......x.....::...::x.:x....xxx..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 9796404 NA +3307 chr4 + 190214555 73569217 73569216 73569309 93 TTTGGTTCTTATGAAGGTTTTTTCTTTTTTTCTTTTTCTTTGTGTGTGTGTGTGTGTGTGTGTAAATCATTGTTA-AATTTGGTGTTCCTGTTT chr4 + 94230402 26257025 26257024 26257118 26257025 26257024 26257118 94 TTCAGTGTTTTTGTGGCTCTTGTCCTGTCTTTTTTTTTTTTTTGTGTGTGTGTGTATTTGTGTATTTGAAGGTTGTAATTTACTGCTCATATTT ..::..x:..x..x:.x.:..x..:.x.:..:.....:...x.............:.x......xx.x.xx...:-.....:x..:..x.:... 75M1I18M 64/93 68.8% 94/94230402 0.0% 1/93 1.1% 47312192 NA +11500 chr4 + 190214555 73576404 73576403 73576743 340 ACTTACTTTGTTACTATTCTTTGAATCTCTCTTTTCTCTTCTTCATTTAATCTTTGAAGAATGGATTCCAAGAGAGAAAAGTGAAAGTTAATGTACTGAGCCACCTAAGAAAGAAGAAGAAGAAAAAAAAAAGAAAGCAGAACAATTATGCAAGAGGTGCTGAGTCAGGAGGGAAGCAAAAAACAGATTCAGGGTGATGGTATTCATACATCACTGCTAATTTCTTCTGCATCTTTATCCATGAGGAAAATGCGAGCATTCTTTTCAGAAGGTCCCTGTAGGAGCCTCTGCAGTAGCGGAATGTCTGTCTTCTTTAGTCGTCTTTGTTCTGCAGTGAAAA chr4 + 94230402 52386624 52386623 52386945 52386624 52386623 52386945 322 ATTTACTTTGCAATTGTCTGTTGAATCTCCTGTTCTTCCTCTTCTTTTATTCTTTGCAGAATTGATTCCAAAAAGGGAAGATGAAATTGAATATATTGAGCAACCTATCAA----GAAAATGAAGAGAAATGCCCATTAG--TGATTATG----------TTAACTGGGAAAAATACTGTGAACTG--TTAGAATGATGATATACATACATCACTGCTGACCTCTTCCACATCCCTGTCCATGAGAAAAAACTTGGCAGCCTCCTCTGATGGCCCCTGCAGGAGTCTGTGCAGTAAGGGAATGTCTCCACTCCTCAGCTGCTTCTTCTCTGGGATGTAAA .:........:x.:.:.::x.........::x..::..:.....x....x......x.....x........:.::.:..::.....x.x...:..:.....x.....xx..----...:.x...:.:...x:xxx.x:..--::......----------.x.::::...:::.x:.x:x:...x.--.:..::.....:...x..............:.::.....::....::.:........:....xx:x:...x:..::..x..x..:.....:.....:..x.......:x.........x:x:..:.:..::.::.:.x:....x::..x... 111M4D25M2D8M10D26M2D152M 215/322 66.8% 322/94230402 0.0% 18/322 5.6% 21189780 NA +3744 chr4 + 190214555 73581812 73581811 73581882 71 CTTACCTCCTGTTGCAAAAATAATGTGAAGAGCAAAATCCTGGGGACTATTTTCAATCTGTCAAGGGAAAA chr4 + 94230402 52387946 52387945 52388016 52387946 52387945 52388016 71 CTTACCTCCAGACACATGGATAATATAAAGTGCAAAATCATGGGGACTGTTTTCTATCTGTAAACACAAAA .........x.x::..x::.....:.:...x........x........:.....x......x..x:x.... 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 21193866 NA +6429 chr4 + 190214555 73582184 73582183 73582302 119 GTTACCTTAAATTTTTGGAGAAGTTGCTTTATTACTTCTTCAGTTCTCATGTTACTGTTTACTCTGACCTTAGTTTCTGATTCAAAGGCTGGAATGAAAATTGATGTCTAGAAAAAGAA chr4 + 94230402 52389051 52389050 52389169 52389051 52389050 52389169 119 GTTACCTTGAACTTTCGAAGCAACTGTTCTATTACTTCCCTTGTTCTCATATGGCTGTTAATTCTTATTTTGGTTTCTGATCCAGAAGCTGGAGTGAAAACAGACGTCTAAGAAACAAA ........:..:...:.:..x.::..:.:.........:::x........:.x:.....x.:...x.::..:.........:..:.:......:......:x..:.....::...x:.. 119M 86/119 72.3% 119/94230402 0.0% 0/119 0.0% 21193133 NA +5618 chr4 + 190214555 73585177 73585176 73585403 227 TACTTCATGGTTATAGAAGTGTCCATTAATAGAGGCTCTATTTTTCTGTCTTTCTTTTCTGTCCATCATCAGAGGCTTCATCCTTTTTCTCACCAGAGCTGCTTCACTCATGGTTCTATAGAGCACTGGGG---AGTCTGGTTCATCCTTTGCATGTGGCTTCAGGGTGTTGCTGTGATAAGATAAATAGTCTGGGAAGAAT-AGATTATAAGCTCATATCATTCAGCTGC chr4 + 94230402 52389618 52389617 52389845 52389618 52389617 52389845 228 TACCTCATAGTTGTAGAAGTGGCCATTAATAGAAAATCTGTGAGTTTCCACTTCTGTTCTTGCAATCATGGAGAACTTGGTCCTCTTCCTTAC---AGCTGCAGTACTGCTGACCGCCCTGGGCAGAGTAGCACAGTCATGTTCCTGCTCGCTCTTGGACTTCAGAGTACTGCTTTCATAATATGAATAACCTGGACAGAATGAAACTGCATCAGCACATTGTACAGCTGC ...:....:...:........x...........::x...:.xxx.:.x:x:....x....xx.x.....x:::::...x:....:..:..:..---......xx:...xx..:::x:x:x.:...xx.x:.---....xx....x.x..:xx:x.xx.:......:..::....x.x....x..:....::....:x.....-.:.:.::.xxxx..:..::.x....... 93M3D35M3I68M1I28M 140/224 62.5% 228/94230402 0.0% 7/224 3.1% 21195559 NA +4263 chr4 + 190214555 73587831 73587830 73587985 155 GATACTGACCTTCCTGGGAATTCCTTTTTTCAGACATAGGAATCTGGGTCCTGTCCAGCTCACTAATACGATAGAGATCGTCAAATTCCCCCCAGCGTGTCATTCTGA-GAAGTAATAAATC----TTGTAAGTACATCAGTTCCATTTATATTGAAGCC chr4 + 94230402 52390231 52390230 52390384 52390231 52390230 52390384 154 GACACTAACTTTTCTCAGAGTTCAGCTTTTCTTCAGTAGATTTCAATGTCTC------CCCGCTAATATGATGCAGATCATCAAATTCTCCCCATCGTGTCATTCCCCTGAAATAATAAATTTACATTATTAACTTGCGAGTTTAATTCATCCTGTAGCC ..:...:..:..:..x:..:...xx:.....xxxx:...:xx..x:x...::------.:.:......:...:x.....:........:.....x..........:xx-...:........:----..:.x.::x:::x....:x...:..x:..x.... 52M6D50M1I13M4I34M 98/149 65.8% 154/94230402 0.0% 11/149 7.4% 21197600 NA +5478 chr4 + 190214555 73593442 73593441 73593613 172 ATAGCTTACCCTTTGCTGGAGAAGACG---------TCTGATGACTTCATACTAGTAAAAGAAGAGAATGGCTTCTCATCTTGTATTTTTAGCTGTATAGGTCGTTTTACTCCCCAGAAAATGTCCAGCATTCCTTCAACAATTAGTTTGCCATCT--TCAGTCTAAGGAAGAAATGAATAAT chr4 + 94230402 52392231 52392230 52392413 52392231 52392230 52392413 183 ATATATTACCTTTTACTGGGGAACAAGCCCACATTCTCTGTTGACTTCAAGGTTACAAAAGAGGGTATCTGCTTCTCATCCTGAATTTGTAAGCGGATAGGATGTCGAACTCCCCAAAATATTGATAAGATTCCTTCAATAAATGGTTTACCTCCTTCTCGCTGTGGGGGGAAAAAGAAGAAT ...xx.....:...:....:...x.x.---------....x........x:x.x::......:.:x.x:x..........:..x....x..:x:.x.....x:..:xx........:..x..xxx:.:x..........:..x.:....:..x:..--..:x.x.::..:::...x...x... 27M9I120M2I25M 116/172 67.4% 183/94230402 0.0% 11/172 6.4% 21201211 NA +3518 chr4 + 190214555 73614962 73614961 73615121 160 TGAAAGGTAAGAACATGCTTTGGTAAAAGTCCCATTGTTAGTATTAACAGTGAAGTGAAATACAAAAGTTAGCCGGGTGTGGTGGAACACACTTTTAATCCCAGCTACCTGGGAGGCTGAGGCCCGAGAATCACTTAAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033144 76033143 76033277 76033144 76033143 76033277 134 TAAAGATTAGGGACCTGGTTTGGGAAA---------GTATGTAATGTCATGAAAGGATGATACACA------------GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::x..:.:..x..x.....x...---------..xx...x.:x..xx:...x:x:.....x.------------......-----...x.x..:.:........:..::........x..:.x...x.....:....::.:..x.xx:..:..:.. 27M9D30M12D6M5D71M 91/134 67.9% 134/94230402 0.0% 26/134 19.4% -2418182 -91812220 +4693 chr4 + 190214555 73620548 73620547 73620740 193 GAGCCCCAGGAGCTGTTAATTATTTCTCCTTTTCGCCACAGCAGGGAAGTGTCAAGAAACCTGAGCCACTCCCTGTGCCTCAGTGCATGTTGGGAGTGTTTACTTTCTTAGG------------AACAGCTGATAGGTACACTCCTTTGCTCTCTGCCACACTTCTTGAGAAATGAATGGACATTCTAGTTAACGCTTTAACCAC chr4 + 94230402 52404860 52404859 52405048 52404860 52404859 52405048 189 GACCTCACGGAGCTGCTAATTA---CTGTTTTGCTCACCAAACTGGGAGTGCTGGGAAGCCAG-GACACTCCCCGCACCTCGGTGCATGTCGGGAGTGTTCACCTTCCCACTTTCCTTCCTCCCCGCAGCTGA-GGGAGCGCTCCCTGAGTCACAGCTGCACCT-----------ACGGGAGGCTCCGGTTAACACTTTAATCAC ..x.:.xx.......:......---..x:...x.x.xx..:xxx..:....::::...:..x.-.x.......:.::....:........:.........:..:...::.xx------------x:.......-:..x:.:....:.x:x..x.x..::...:.-----------.xx...x::..::......:......:... 22M3D38M1D48M12I9M1D30M11D30M 119/177 67.2% 189/94230402 0.0% 28/177 15.8% 21215688 NA +6100 chr4 + 190214555 73636510 73636509 73636666 157 AGCCAGAAGAGTTAGGCAAGAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAG---AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGA chr4 + 94230402 39943836 39943835 39943996 39943836 39943835 39943996 161 agacagaagagggaattgaggaaaaaaaagaaaggagaataagcaaagagggaagggagagaagaaagaggagaagaaagaataagagaagaTAGCAAGCAGGGAGAAAGA-AGAGCATAAAGAGAGAAAATGAGAGTAGAGAAGAATGAAAGAGGAAAAGA ..x........xx.:x::..::...:........:.--.x..:x.....::...:.:.:::........::::.........x:.:....::x.:x.::x..:....:...-....---.:.......:..x..:..x.:::.....x........:..... 36M2I73M1D4M3I43M 108/156 69.2% 161/94230402 0.0% 6/156 3.8% 33692674 NA +3018 chr4 + 190214555 73636530 73636529 73636605 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 32524352 NA +3373 chr4 + 190214555 73636563 73636562 73636755 193 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGA----GAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAA-------------GGAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGG chr4 + 94230402 17246041 17246040 17246250 17246041 17246040 17246250 210 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGGG .....:x..x:.:xx:::..x:...x..x.:x::....:.:...:..x......----::....x.:.:x:x...xx..::x.:...xx:..::...:..:..:..:.:xx.xx.:::.:.......:x....x.:x..:....:.:.x.-------------:.x::.........x..:.x:::..::x.xx..x:...:.x.x.:.. 54M4I92M13I47M 109/193 56.5% 210/94230402 0.0% 17/193 8.8% 56390522 NA +3898 chr4 + 190214555 73636567 73636566 73636761 195 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGG--------------AAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGGAAGGG chr4 + 94230402 17246041 17246040 17246249 17246041 17246040 17246249 209 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGG .....:x..x:.:xx:::..x:...x..x.:x::......:...:..x......x:xx::....x.:..x:x:..xx..::x.:...xx:.......:...:.:..:.:xx.xx.:::.:.......:x....x.:x......::.:.--------------x..x:....:.:.:.x....x.::.:..x.xx::.:.::.:..x:.. 148M14I47M 110/195 56.4% 209/94230402 0.0% 14/195 7.2% 56390526 NA +3658 chr4 + 190214555 73636571 73636570 73636742 172 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAG-GAAGAAA---------------GAAAAGAAAGAAAAGGGAAGGA chr4 + 94230402 17246041 17246040 17246228 17246041 17246040 17246228 188 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAA .....:x..x:.:xx:::..x:...x..x.:x:::.....:...:..x......x:xx::....x.:..x:x:..xx..::x.:...xx...::...:...:.:..:.:xx.xx.:::.:.......:x....x..x......-....x..---------------..:........x..::x:..:. 143M1I7M15I22M 103/172 59.9% 188/94230402 0.0% 16/172 9.3% 56390530 NA +3133 chr4 + 190214555 73636575 73636574 73636720 146 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAA chr4 + 94230402 17246041 17246040 17246186 17246041 17246040 17246186 146 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGA .....:x..x:.:xx:::..x:...x..x..x:::.....:...:..x......x:xx:::...x.:..x:x:..xx..::x.:::.xx:..::...:...:.:..:.:xx.xx.:::.:.......:x..:.x..x.......:. 146M 80/146 54.8% 146/94230402 0.0% 0/146 0.0% 56390534 NA +3616 chr4 + 190214555 73636579 73636578 73636729 151 GAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAA chr4 + 94230402 17246041 17246040 17246191 17246041 17246040 17246191 151 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAA .....:x..x:.:xx:::..x:...x:.x..x:::.....:...:..x......x:xx:::...x.:..x:x:..xx..:.x.:...xx:..::...:...:.:..:.:xx.xx.:::.:........x..:.x..x..:....:...x.. 151M 86/151 57.0% 151/94230402 0.0% 0/151 0.0% 56390538 NA +3589 chr4 + 190214555 73636581 73636580 73636731 151 AAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAAGA chr4 + 94230402 2498505 2498504 2498657 2498505 2498504 2498657 153 AAGAGATGGAGAAGGGAACAATGGG-GAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGA-AATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ....:.x::....:.:..x..x.:.-...x.:x::x.:x..x:..x.x::....x:.::..x..x...x:xx..:.x.:..:.:..:.-..x.:....:.x----....::......:...:::...:.:...x..:.x.........x..:.:. 25M1D62M1D12M4I50M 92/149 61.7% 153/94230402 0.0% 6/149 4.0% 71138076 NA +3996 chr4 + 190214555 73636594 73636593 73636707 114 AGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAA--AGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--------AAGAAAGAAAGAAAGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..xx.x...............:...:.x....:xxx....--::..x.:..x.x:.....x:...:.:...:..:....:::..::.x.--------...x.x...:...:... 50M2I47M8I17M 79/114 69.3% 124/94230402 0.0% 10/114 8.8% 22488215 NA +3694 chr4 + 190214555 73636604 73636603 73636721 118 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAA--AGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----AGGAAGGAAGGAAGAAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ...:...:::..xx.x....................--....:xxx....xx:..:x..:.x.x::..::x..:.....:...:::.:..:..::..x..x.-----.:.x.x........::.. 36M2I64M5I18M 78/118 66.1% 125/94230402 0.0% 7/118 5.9% 22488225 NA +3353 chr4 + 190214555 73636608 73636607 73636741 134 AGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAG------GAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ...:...:::..xx.x...........:.........x.:.::xxx.:.:xx.:..x.:..x.x:..::.x:...:.:...:..:...--..:..::.:x..------....x.x...:...::..:x.x:xx...:... 88M2D12M6I32M 82/132 62.1% 138/94230402 0.0% 8/132 6.1% 22488229 NA +3054 chr4 + 190214555 73636612 73636611 73636708 97 AGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ...:...:::..xx.x.......:...:.........x.:.::xxx..::xx::..x.:..x.x:..::.x:...:.:...:..:....:::...:. 97M 58/97 59.8% 97/94230402 0.0% 0/97 0.0% 22488233 NA +3074 chr4 + 190214555 73636714 73636713 73636777 64 GAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGGAAGGGAAGGGAAGGAAAGGAA chr4 + 94230402 48632627 48632626 48632690 48632627 48632626 48632690 64 GAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA ...::x.....:......x.......:::......::.....:.:x.....::x:::....::. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 25004087 NA +3239 chr4 + 190214555 73636752 73636751 73636894 143 AAGGGAAGGGAAGGGAAGGAAAGGAAAGGAAAG-----GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAGGGAAGGGAAAGGAAAGGAAAGAAAGAGAGGAAGGAAGGAAGGAATTCAAATTGGAAAAGAGGAAGT chr4 + 94230402 59372556 59372555 59372694 59372556 59372555 59372694 139 AAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAAT---------AAAAGGGTAAGT ...x:.x.x..:......x..x:.:.......:-----.....x..x.:.x.:x...:.:..::.x.:x..x::x..x..:...::x.::::..:...:...:..x:.x.::.:....::x..x...---------.....:.x.... 33M5I89M9D12M 83/134 61.9% 139/94230402 0.0% 14/134 10.4% 14264196 NA +3084 chr4 + 190214555 73644122 73644121 73644195 74 TTCTTGTTCATTTTCTGATGGTGTTACGGTCTCTTCTTCTTTCTTTCTTTCCTTCCTGTCTTCCTTTTACTGAA chr4 + 94230402 47742209 47742208 47742282 47742209 47742208 47742282 74 TTCTTGTTGCTTTCTTGATGTTGGTACTGTTTCTTCCTCTTTCATGCTTCCCCTTCTCTTATACTGTGCCTAAA ........xx...::.....x..x...x..:.....:......x.x...:..:.:..x.:x.x..x.xx..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 25901913 NA +3536 chr4 + 190214555 73674289 73674288 73674365 77 ATATATATACACGTATATATATATACATATATATATACACGTATATA---------------TATATATACACGTATATATATATATATATA chr4 + 94230402 6244962 6244961 6245053 6244962 6244961 6245053 92 ACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACA .:..:..x...................x..............x:x..---------------.:.:..x:x::..:....x.........:. 47M15I30M 60/77 77.9% 92/94230402 0.0% 15/77 19.5% 67429327 NA +3073 chr4 + 190214555 73699742 73699741 73699828 87 CTCCACTTTTCCTCCTCCCTCTCCTTCTTTTCTTTCTTCTTTTTCTTCTCTCCATCCTTTCCTCCTTTTCTTTTTTCCCTCCTCTTC chr4 + 94230402 14546073 14546072 14546159 14546073 14546072 14546159 87 CTCCTGTTTTCTTGCCCAGCTCTCATCTTTTCTTTCATCTGTCTCTTCTTTTTTTCCTTTCATCTGGTTTTTGCTTCTCTTGCTTTC ....xx.....:.x.:.xx::::.x...........x...x.:......:.::x.......x..:xx..:..x:...:..:x::... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 59153669 NA +3062 chr4 + 190214555 73699777 73699776 73699828 52 CTTCTTTTTCTTCTCTCCATCCTTTCCTCCTTTTCTTTTTTCCCTCCTCTTC chr4 + 94230402 29748786 29748785 29748837 29748786 29748785 29748837 52 CTTCTTTTTTTTCACCCCTCCCTTTCCCCCTATTCTTTTTTATTTCCCCTCC .........:...x.:..x:.......:...x.........x::...:..:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 43950991 NA +3046 chr4 + 190214555 73717363 73717362 73717405 43 AGACCCCGTCTCAAAAAAAAAAAATAAAAAAGGAACTAAGAAA chr4 + 94230402 33767111 33767110 33767153 33767111 33767110 33767153 43 AGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAA .......x:.:.............:......::...:...... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 39950252 NA +3464 chr4 + 190214555 73727501 73727500 73727585 85 GAGGGAGGGAGGAAGGAAGGAAAGAAGGAAAGAAGGGAGGGAGGAAGGAAGGAAGGAAAGAAGGAAGAAAGGAAGGAAGGAAGGG chr4 + 94230402 1500700 1500699 1500784 1500700 1500699 1500784 85 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGG .:..:..:..:...:.:x..:::....:.:x..:....:.......::..:x.:.:....:..:..x.::..:x.:x.x..:... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 72226801 NA +3050 chr4 + 190214555 73788380 73788379 73788439 60 ATGAGGAGGAGGAGGAGAAGGAGAAGGAGGAGAAAAAGGAGGAGGAGAAGGAGGAGGAGG chr4 + 94230402 1196833 1196832 1196892 1196833 1196832 1196892 60 ATGATGAAGAGTTGCGGAAGGAGCAGCAGGAGAAAATAAAGGAGGAGGATGATGAGGAAG ....x..:...xx.x:.......x..x.........x::........:.x..x.....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 72591547 NA +3192 chr4 + 190214555 73796783 73796782 73796829 47 AAAGTATAATTCAAAAAACTTGCATAACTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72071167 72071166 72071213 72071167 72071166 72071213 47 AAAAAACAACACAAAAAACTTGCAAAGCTTTTTTTTTTTTTTTTTTT ...:x.:..:x.............x.:.................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 1725616 NA +3341 chr4 + 190214555 73804955 73804954 73805015 61 GTGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGGGGCGGGAGAATCGCTTGAACCCTGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:......:....::......:.x.xx.x...x.:.........x.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -2228249 -92002153 +3012 chr4 + 190214555 73840886 73840885 73840929 44 ATGGTTTTTTGTTTGTTTGTTTTTTTGTTTGTTTGTTTGTTTTT chr4 + 94230402 27947637 27947636 27947680 27947637 27947636 27947680 44 ATGGTTTTGTGTGCATTGGGTTTTTTGTTTGTTTGTTTGTTTTT ........x...x::..x.x........................ 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 45893249 NA +3709 chr4 + 190214555 73858530 73858529 73858705 176 AGGGTAATAGAATTAGTTTTCTTTGGCCAGAGAAT-----GAATAGCTAACCTATGTGATCCAGCATTCACTTATACATAT-------------ATGTAGATCCTATGATTCTTATATTCATT---GTGTGTATATGTATGTGTGTATGAATGTATGTATATATTTCCACACATACAGATACATACACACTCACACA chr4 + 94230402 85834426 85834425 85834614 85834426 85834425 85834614 189 AGGGTAACTGGAT--GTTTTCTATG-CTACTGAATACACTGACTGTTGACTTTCTGTGATACAGC-TTTATTAATACCTACCTTATTTGCCAGAATGTAGTT----TGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .......:x.:..--.......x..-.:.xx....-----..x.:x:x.x::.x......x....-..:.:.x....x..:-------------......x.----..:x.:..x........---..x...:.:...:.........x......x.:...:..x.x:.x.:.:.::xx..:::.....:x...... 13M2D10M1D9M5I25M1D15M13I8M4D17M3I71M 118/168 70.2% 189/94230402 0.0% 29/168 17.3% -11975896 -82254506 +4251 chr4 + 190214555 73869664 73869663 73869797 134 CCTAGGAGCGTCCGTGGCCACTGAACTGCGCTGCCAGTGCTTGCAGACCC--TGCAGGG-AATTCACCCCAAGAACATCCAAAGTGTGAACGTGAAGTCCCCCGGACCCCACTGCGCCCAAACCGAAGTCATGTAAG chr4 + 94230402 52434697 52434696 52434831 52434697 52434696 52434831 135 CTCAGGCACGTTCA--GCGATTGAACTCCGATGCCAGTGCATAGAGACTCATTCCAAGTTCATCCACCCCAAGTTCATTCAAAATGTGAACCTCACCCCTAGCGGACCTCACTGCAAGAATGTGGAAGTCATGTAAG .::...x:...:.:--..x.:......x..x.........x.:x....:.--.x..:.x-x..:.........xx...:....:.......x.x.xx:.:xx......:......:xxx.x::x............. 14M2D34M2I7M1I77M 92/132 69.7% 135/94230402 0.0% 5/132 3.8% 21434967 NA +3071 chr4 + 190214555 73882731 73882730 73882798 68 AGAACATTCTTTTCTTTTCAGAACCACACTGAAAGATGGGAAAATAATTTCTTCGGATCCCTGCATAT chr4 + 94230402 86547224 86547223 86547291 86547224 86547223 86547291 68 AGAATTGTTTTTTTTTTTCAGACTGACATTAAAAAATGGAAAAATAATTGTTTCAGGACAATGCAGAT ....:xx.:....:........x:x...:.:...:....:.........x:...:.:x.xx....x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -12664493 -81565909 +3072 chr4 + 190214555 73921868 73921867 73921939 72 ACTACAATTAGATTGTCTAATTTTACCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCG chr4 + 94230402 78260491 78260490 78260562 78260491 78260490 78260562 72 ACTAAAATGAACTTGCTTAATTTTGTCTTTTTTTTTTTTTTTTTGATTGCTTATTTCTGCAACAACCTCTTG ....x...x.:x...::.......::...:..............xx..x:..x...:..x:..::xx...:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -4338623 -89891779 +3339 chr4 + 190214555 73925098 73925097 73925180 83 TTTACATATATATGTATATGTGTATATATATCGATATATATGTGTATATGTATCGATACATGTATATACATATATACATATAT chr4 + 94230402 85834535 85834534 85834615 85834535 85834534 85834615 81 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTA--AATACATGTTTATGCACACATACACACAT ..:.:x.:.:.x...:.:.....:.:.:...::..:..x:::.::.......--:........x...:..:.:.....:.:.. 52M2D29M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -11909437 -82320965 +3102 chr4 + 190214555 73961117 73961116 73961182 66 CTTGGGTACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 + 94230402 92218270 92218269 92218335 92218270 92218269 92218335 66 CTTTGATTCATTTTCTTTTTTTTTTTTTTCACTTTTTATTTTAATTTTCATTGGTTTTGAGAAGAA ...x.:.x...:..:..............:x:.....x....xx....:x..xx........x.:. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -18257153 -75973249 +3117 chr4 + 190214555 73982160 73982159 73982231 72 TTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAA chr4 + 94230402 77634761 77634760 77634832 77634761 77634760 77634832 72 TTATTAAGAAAAGTAATTTAAAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAAGTCATACAGAAA ...::..:....:x..xxx......x:x..............:....x...x...x.....xx.x.x..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -3652601 -90577801 +3029 chr4 + 190214555 73982162 73982161 73982242 81 ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 27189992 27189991 27190072 27189992 27189991 27190072 81 ATCAAAAAATATGGAAAATACAGAAAAAAAAAAACAGAAAAAAATGGAAAATACATCAAAAATATGGAAATACAGAAATAA .:.......x.x::....x.x.:...........x.:.......x::.:..x.x.xx.:...x.x:....x.x.....x.. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 46792170 NA +3113 chr4 + 190214555 73982177 73982176 73982232 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAG chr4 + 94230402 78266968 78266967 78267023 78266968 78266967 78267023 56 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAG ..:....x...:.xx...........xx....:.:...::.:.......:...... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -4284791 -89945611 +3244 chr4 + 190214555 73982181 73982180 73982236 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 78266968 78266967 78267023 78266968 78266967 78267023 56 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAG ..:....x...:.xx...........xx.:..::.......:.......:...... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -4284787 -89945615 +3587 chr4 + 190214555 73986030 73986029 73986112 83 TTTAATCCTTCCATAAACTCTATGAGGGAGG----CAATATTATCCCCATTTTAGGGATGAAGAACCTAAGGTACAGAGAAATTAAG chr4 + 94230402 28016162 28016161 28016248 28016162 28016161 28016248 87 TTTAAACCTTCCTGCACCTCTAGGAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAG .....x......xxx.x.....x...:x...----.........:.........x:....:....x:::x.:........:::.x.. 31M4I52M 61/83 73.5% 87/94230402 0.0% 4/83 4.8% 45969868 NA +3203 chr4 + 190214555 74019320 74019319 74019425 106 ATATATTTATATATATATTATATATATTTATATATATATTTATATATATTTATATATATATTTTTATATATATTTATATATATATTTATATATATATTTATATATA chr4 + 94230402 81427512 81427511 81427617 81427512 81427511 81427617 106 ATCCATCCATAAAAGAATTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ..x:..::...x.x:x.........:.x.x.::..:.::xx.xx.x.x.:x...::.....x:...x.......:..::.:........:...xx..xx:...... 106M 67/106 63.2% 106/94230402 0.0% 0/106 0.0% -7408192 -86822210 +3469 chr4 + 190214555 74019349 74019348 74019459 111 ATATATATATTTATATATATTTATATATATATTTTTATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATTTATATA chr4 + 94230402 56938588 56938587 56938690 56938588 56938587 56938690 103 ATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA---ACAGATAC-----TGTATTCATTATTCTGTACATGCAGATGTATATGCATATA ...x.......x.x.....xx.:x......::........:....:.x.......---.:.x...:-----.:...x:...xx.x.:..:..x:.x..:.....x:..... 55M3D8M5D40M 74/103 71.8% 103/94230402 0.0% 8/103 7.8% 17080761 NA +3029 chr4 + 190214555 74074837 74074836 74074894 58 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAGAGTGCAGGATGTTTTCAGGAATG chr4 + 94230402 90391916 90391915 90391973 90391916 90391915 90391973 58 TTTCTTATCTTATTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGTTGTCAGAGATG ...:..x.:..x...................:.:.:.x.x:..:x...x....::... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -16317079 -77913323 +3176 chr4 + 190214555 74103776 74103775 74103858 83 CATAGTGGCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGAAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--.::.x......:...........::........x.xx.x...xx:........::.:..xxxx:..:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -1929421 -92300981 +9537 chr4 + 190214555 74174460 74174459 74174696 237 GTGTTTCTTATTTTCTTTTTAGTATTTATTGTTTTGCTTTCCACAGACATGAAGCCATTATTATATCAGGAACCGAAATGGCCAAGCATATCCAGAAAGAAATACAGCGAGGTGTGGAATCATGGGTTTCCCTTGGAAACAGAAGACCTCACCTCAGTATAATTTTAGTGGGAGATAACCCAGCAAGCCATACATATGTCAGGAATAAGATAAGAGCTGCCTCTGCTGTAGGTGGGT chr4 + 94230402 46114923 46114922 46115135 46114923 46114922 46115135 213 GTGTGTACTTTTGTCTTTTTAGTG------------------------ATGAAGCAGCCGTTATCTCGGGGACAAAGCTCGCCAAACAAGTCTTAAAGGAAGTTCAAAGAGATGTGGAATCGTGGATATCCTGTGGGAACAAGAGACCTCATCTCACTGTCATATTAGTAGGAGACAACCCAGCTAGTCATATCTATGTCAGAAATAAGGTAAAAGCAGCTGCAGCTGTAGGTATGT ....x.x:.x..x..........:------------------------.......x::::....x..:..:..x:.:x.x.....:..x:..:x:..:...:.x..:x...:.........:...:.x...:x...:....::........:....x.:.x..x.....:.....:........x..:....:x........:......:...:...x..:x.x.........:x.. 24M24D189M 154/213 72.3% 213/94230402 0.0% 24/213 11.3% 28059537 NA +7417 chr4 + 190214555 74175250 74175249 74175496 247 AAGTGACCTTCTCTACCTGTTTTTCTTCTAGGTATTTGTAGTGAGCTCATTCTAAAACCTAAGGATGTTTCTCAGGAAGAACTTTTGGACGTAACTGATCAATTGAATATGGACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCACTACCAGGTACATAATGCTCCTCTTATTT----------ATCTGATTTTGTTAAAAGTGAAACAAAGGGCATCTTTCAACATCATATTATGATACTGCAAGTAATTTATA chr4 + 94230402 46115967 46115966 46116200 46115967 46115966 46116200 234 AAGTGTCTTTCT--------TTTTCTGTCAGGAATTTCTAGTGAGGTCATACTGAGGCCTAAATATATTTCTCAGGAAGAACTCTTGGATATGACGTTAAAACTCAACAAGGACTCAGCGGTTAGCGGTGTATTAGTTCAGCTGCCTCTCCCAGGTAGGTGTTA--TCTCTTATCTCACTTCCTACATATGGTCTATGTAAGAGGAAAATGTTGGACAACTTT-------------TGTTGTTGTAAGTATATCATA .....x.:....--------......x::...x....x.......x....x..:.::.....:x..:................:.....::.:..xxxxx..:.x..:.x....:..:x:..:......:...........:.:..x..x.......x:.:x.:--:.......:.----------..x..:.:.xxx...:..x:...::xx..:..x....-------------..x.::..:.....xx.:... 12M8D144M2D10M10I37M13D21M 157/224 70.1% 234/94230402 0.0% 33/224 14.7% 28059283 NA +3037 chr4 + 190214555 74185422 74185421 74185474 53 GGAACATCAGAGCAAATTAAACACAACATAAAAACAAAAAAAGAAATAATAAA chr4 + 94230402 47452226 47452225 47452278 47452226 47452225 47452278 53 GAAATGGCAGAGAAAATTAAAAACAAAATAACAACAAAAAAAAAACCAATAAA .:..::x.....x........x....x....x..........:..x:...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 26733196 NA +10076 chr4 + 190214555 74199784 74199783 74199959 176 TATTTTTCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATATTATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAATAAAAAGAACAGGTTGGTAATTTGT chr4 + 94230402 46119584 46119583 46119759 46119584 46119583 46119759 176 TGTTTCCCAGACCATATAGATGAGCGGACAGTTTGTAACGCTATCGCACCTGAAAAGGATGTGGATGGATTTCATATTATTAACGTTGGACGTCTGTGTCTCGATCAGCCTTCTGTAATACCTGCCACTGCTGCTGCTGTCTGGGAAATCATAAAGCGGACAGGTAGGAAATTCAT .:...::.......::.x........:...:.x..:..:.xx..:..x..x.....:.....:.................:..::.....x.x:....:..:.......x....x.x..............::x......:........x.....:x.:......x..x....::. 176M 135/176 76.7% 176/94230402 0.0% 0/176 0.0% 28080200 NA +8155 chr4 + 190214555 74201256 74201255 74201376 121 TTTTAAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCTATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTAGGT chr4 + 94230402 46120491 46120490 46120611 46120491 46120490 46120611 121 TTGTAAGGAATACAAACATTTGGGAAAAATATTCTTGTAGCTGGAAGATCTAAGAATGTTGGAATGCCCATTTCAATGCTTCTGCATACTGATGGAGAGCATGAAAGGCCTGGAGGTAAGT ..x........x...........:......:.xx....:...........:.....:..x..:.....:...x.x......:.:..:..................x....x.......:.. 121M 101/121 83.5% 121/94230402 0.0% 0/121 0.0% 28080765 NA +3399 chr4 + 190214555 74204151 74204150 74204257 107 AGACATGGAGTCAGGCCCC--CTCCATTACCAAGCC--CTGTGATCTCGGGCAAGTCATTTAATCTGTGTAGGCCTCCGCTTTCCTCATCTCTAAAATGACAATAATATTA chr4 + 94230402 13242434 13242433 13242544 13242434 13242433 13242544 111 AGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTA ....x..::...x.x:...--...::::..::.x:.--......:..:..........:x..::..x.x..:xx.::.:x.....:.....x......::x:...x..:.. 19M2I15M2I73M 70/107 65.4% 111/94230402 0.0% 4/107 3.7% 60961717 NA +3053 chr4 + 190214555 74211913 74211912 74211981 69 GGAGGGTGTATGTGTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGTGTAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x.:.:..:...:...:......x.......:....x.x::..:.x:...::xx.x....:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -3634851 -90595551 +3038 chr4 + 190214555 74228704 74228703 74228756 53 TGAGTACAGATATTTAAAAAGAAGACAGGAAAAGAAAAAGAAAAGGAAAATAA chr4 + 94230402 12842632 12842631 12842684 12842632 12842631 12842684 53 TGAGTACACATGTCTGAGAAGAAGAGAGGAAAAGAAAAGAAGAAAAAAAGGAA ........x..:.:.:.:.......x............::.:..::...:x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 61386072 NA +3353 chr4 + 190214555 74230454 74230453 74230532 79 GTGGTGGGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--....:.:.........::.:........x.xx.x...x...........:.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -1802747 -92427655 +3022 chr4 + 190214555 74230550 74230549 74230633 84 ACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAGAAAAAAAAAAAAAAGAAAAAAGAAAAAAAGAAATTATGGGAA chr4 + 94230402 25699775 25699774 25699858 25699775 25699774 25699858 84 ACAGAATTCTATGTTAGATAAAAGATTAAGAAGGTGTTTTTTAATAAACAGAAAAGAAAAAAAGAAAAAAAGAAATGACGGCAA ..x.x.:..:.xx:.:.::..x...x:....xxx...:.:xx..x...x.:....::...................x.:..x.. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 48530775 NA +3143 chr4 + 190214555 74267260 74267259 74267335 76 GGAAATACATTTCTTTTTTCTATTCTA-----TTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTC chr4 + 94230402 78025172 78025171 78025252 78025172 78025171 78025252 81 GAAAAGACATATTTTCTCCTCTTTTTAGAGAGTTCTTTTTTTTTTTTTTCTTTACTGCATTTCTCTTCCTCTCCCCCTCCC .:...x....x.:..:.::::x..:..-----.......:....:........x..x:x........:.....:::..::. 27M5I49M 53/76 69.7% 81/94230402 0.0% 5/76 6.6% -3757912 -90472490 +3924 chr4 + 190214555 74267270 74267269 74267446 177 TTCTTTTTTCTATTCTATTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTT-----------TCTCTCTTTCTTTCTTCCTTTCTTTCTCCTTTCTTTCTTCCTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTTCTTCTTTCTTTGACAGCATATCACTTTGTT chr4 + 94230402 64726428 64726427 64726613 64726428 64726427 64726613 186 TTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCT--CTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTTAAATGATTAGGCAACACAATACTTCATT .....:..:x.x:.:.::...xxx:...::xx......x..:.x..:...x.-----------:..:...x::.x.:x..x...x.x.::.x.....--........:x:xxxx..:...:..:......:x...:.:.:.....:::...::.....:.xxx.xx..x.:..:..:.x:....::.. 52M11I34M2D89M 106/175 60.6% 186/94230402 0.0% 13/175 7.4% 9540842 NA +3184 chr4 + 190214555 74267271 74267270 74267393 123 TCTTTTTTCTATTCTATTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCTCTCT------TTCTTTCTTCCTTTCTTTCTCCTTTCTTTCTTCCTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 69568145 69568144 69568273 69568145 69568144 69568273 129 TTTTGTTTGCCTCTTATCATCCTAATGTCTGTTCCGTTACTACAGTACTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT .:..x...x:x.::...:x.::.xx.x...x...:x..x:.x.xx.x::..:..:x..------..x....:......x.:......:.x.:....::::..x...:xx.....:...:...:...:.. 58M6I65M 76/123 61.8% 129/94230402 0.0% 6/123 4.9% 4699126 NA +3811 chr4 + 190214555 74267289 74267288 74267413 125 CTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTC-TCTCTTTCTTTCTTCCTTTCTTTCTCCTTTCTTTCTTC----CTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTT------------CTTTCTTTCTTTTCTTTC chr4 + 94230402 21408807 21408806 21408948 21408807 21408806 21408948 142 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC .....x.....:...:.x:.xx........x...:-...:........xxx..xx:.::.:..:.:..::..x.----:x....:.:.............:::...xx:..:------------....::.....x:..... 35M1I38M4I34M12I18M 86/125 68.8% 142/94230402 0.0% 17/125 13.6% 52858482 NA +3070 chr4 + 190214555 74267364 74267363 74267413 50 TTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTC chr4 + 94230402 87127724 87127723 87127773 87127724 87127723 87127773 50 TTCTCATTCTTTTTTCCTTCATGCTTGCTTTTCTTTTTTCCTTCTCTTTC .....x..:..:....:...x.x...x.........:..:...:...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -12860360 -81370042 +9631 chr4 + 190214555 74281410 74281409 74281552 143 TCTTTTTGTTTTCAGGTATTCCAAAGTTGATTACGTCTGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCAACTATGTCCACGATCCAGTGACAGGAAAGACAAAATTAGTTGGAGATGTGGACTTCGAAGGT chr4 + 94230402 46128881 46128880 46129023 46128881 46128880 46129023 143 TCTTGATGATTCCAGGTATCCCGAAGTTGATTACAACCGATATGGTCAAAGAAGGTGCAGCTGTGATAGATGTAGGCATCAATCATATCCACGATCCTCTAACTGGAAAGACCAAATTAGTTGGGGATGTGGACTTCGAAGGT ....xx..x..:.......:..:...........:x.:........:...........x.....:..x.....:..:.....::..:..........xx.:..x........x...........:.................. 143M 119/143 83.2% 143/94230402 0.0% 0/143 0.0% 28152529 NA +7055 chr4 + 190214555 74283811 74283810 74284066 256 GCCATGACTCAGCCACCCACAGGAGCAGGCAAGTGATAGGTTTTGACATGT-TGCTCTTCAAGTTGTTCATCAGGACTTAACCTGAGGTGAAGGATGATCCCCCAACTGAGAGGGAGGAATTTTAAGATGGGTTATGCCACAAAACTCATAAGTAACATTTGGCTTCAAATTGCCACAGGGAAAGTGTGGTGGCTGCTTTGTGAGTATCGGTGAAAAGTTTCACTATAACTATAGCCAAGATAAACAAAACAGATGT chr4 + 94230402 46130318 46130317 46130553 46130318 46130317 46130553 236 GCCATGACTCAGAGTTTCAGCG----ATGCACTGTATGTGTCTTGTCATGTCTGCTGT--GGGTTGCTC-TCAGGATTTTACCTGGGGGGAGGGAAGATCC---AAAAAGGAGGGAGGAACTTCAACCTCGATTATGCCACTGCAACTCCAAGTAGCATTTTGCTGTGCATTGCCAAAGGGAAATTGTTGT---TGGTTTATTGGTATCGGTG-AAAGTTTCACTAAATCTCTAAC-------AACAAAAAAACTGT ............xxx::..xx.----.x...xxxx..:x..:...x.....-....x.--::....:..-......:..x.....:..x..:...x.....---..xx::..........:..:..xx.x.:.........x:x.x::x:.....:.....x...x::x.......x.......x...x..---..x...:.x:.........-............x.x..x..:.-------.......x.:x... 22M4D25M1I6M2D9M1D31M3D87M3D19M1D22M7D14M 171/235 72.8% 236/94230402 0.0% 22/235 9.4% 28153493 NA +12691 chr4 + 190214555 74301669 74301668 74301991 323 ATATCTGTTTGTTTTTTTTCCTCATCAGCTGTTAAAAAGAAAGCTGGCTTTATCACTCCAGTTCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACCCTTCTGGCAGCTAAAAAAATCATTTACTAGATCACATG----------AAAGGATAAAGCAAACTGAAGTCATGCTATTTGTTTATTTGACAAAGGGTAAAACCTTTATATTTTACTACAAAGCTATTTATTTCTACATGGTATTTATTTTTTCATGGGTGAAATCATTGTGAATCAATTGATTCACATAGTTTTATG-----------CATTTCCTGCTAATTTATTTTGAG chr4 + 94230402 46135865 46135864 46136190 46135865 46135864 46136190 326 ATGTCCACTTTCTCTCTTTTCTC-TTAGAAGTGAAGAAGAAGGCTGGCTTCATCACTCCAGTGCCAGGAGGAGTGGGACCTATGACTGTCGCAATGCTTCTGAAGAACACGCTGATAGTTGCTAAGAAGCTCATTTACTAGAGGAAGTGGGCTGTCTCAGAAGAAGAATGC------AAGTTGTTCTATTTATTGTTAT--------ACAAAACCTTTATTTTTTACTAGAAAGATATTTATTTCTACATTGTATTTATTTTTTCATG---TAAACTATATTGAACTTGATGGTTTATAAAATGTTATAATACTTTATGTTACCTCCTGCTGACTTACTGTGAG ..:..:::..x:.:.:...:...-.:..xx..x..:.....:........:...........x........x........:.....x..x....................x..xx.:.:x.....:..:x............xx.x:..----------:...:.x..x..------....::.x......:..xx.x.--------::...........x........x....x...............x.................---x...::..xx....::x:x..:..:.:.x.:.x....:-----------:.::.......:.:...:.x.... 23M1D125M10I12M6D22M8D61M3D38M11I24M 230/305 75.4% 326/94230402 0.0% 39/305 12.8% 28165804 NA +9767 chr4 + 190214555 74308257 74308256 74308582 326 ACTTTTACATACATGATTATGCCCACAGGTAACAGGAAACCAGTGTTTCAAAAGAAAACTTGATCACATTGCTAGATAATACAGGTATCCTAACCAAGTGCGTGAGCGCCCAGAGGCTTTCTGCTGCTGCCAGAAGTACATATTTTTTTGATTGGTAAGAACTGCCAGATGACGCTTCATGAAATATAAATGCAACAAAGACTCAGAGAGCTCAATAAAAACCTTCCACCCGTCAGTCTAGAAGGATAAGAG---AAAGAAAGTTAAGCAACTACAGGAAATGGCTTTGGGAGTTCCAATATCAGTCTATCTTTTATTCAACGGTAGGT chr4 + 94230402 46139245 46139244 46139562 46139245 46139244 46139562 318 ATCTCTGCATGCACAACAATGCCCACGGGTAATAGGAAACTGGGGTTTCAAGAGAAAACCCGATCCCAGTGCTAGATAATAGCAGTTTCCTAAATAAATGTGTGGTTGCCCCAAGGGCTGAGCTTGCTGCCAGACG--CACCTTTTTTTGATTGGTGAGAGCAG-CAAATGACGCTTCGTGGCGTATAAGTGCAAGAGAAAACACGGCAGCACAGATAAGTGGATCCAACGAGCA--CCGGCAGAGGAAGGTTGCAAAGGTGCTAAAGCAGCTGCTTGCCATGGCATTTGGAATGCTCA------TCTACATTTTGCTGAAAGGTGGGT .::.:.:...:..::.:x........:.....:.......::.x.......:.......::....x..x............xx:..x......x:..:..:...:x:....x:...x:.xxxx:..........x.--..:x..............:...:.x.-..:..........:..:x:.....:.....x.:.:.x:xx.:x...x..:xx..:xxxx....x.x:x..--.::.x..::x...:x---....:x:x.x.....:..:.xx.xx.....x..x...:.x.:x.------....:x....::.x..x...:... 136M2D26M1D70M2D15M3I44M6D24M 210/315 66.7% 318/94230402 0.0% 14/315 4.4% 28169012 NA +8392 chr4 + 190214555 74312904 74312903 74313180 277 CCTCTTTAATTTAAATTCCTTATTTCCATTTATTTTTTTAAATTTATTGAAACAGGTTATTTGTATTTCTACCAC------CGTAGGTTTTAAAATTAAACTTTTT----------TTCTTTTTTTAAAGGTGTTTTACTGGTTATACTGGAGAAAGGTGTGAGCACTTGACTTTAACTTCATATGCTGTGGATTCTTATGAAAAATACATTGCAATTGGGATTGGTGTTGGATTACTATTAAGTGGTTTTCTTGTTATTTTTTACTGCTATATAAGAAAGAGGTATGAAAAA chr4 + 94230402 46145849 46145848 46146128 46145849 46145848 46146128 280 CCTTCCTAGTTCAGACTCATTCTAC------ATTGTTTAAAACTACTTAAAACTAGCA---TGTATTTCTGAAATAGAGAGCAGAAGTTCTGAAT----ACTTTTTACATGGTGTGTCTTTATTTTGCAGGTGCCTTGCGGGTTACAATGGAGAGAGGTGTGAACATTTAACACTGAATTCCTATGCGCATAATTCTTATGAGCGCTACATTGCTGTGGGAATTGGCATAGGAATACTCACAAGTGGGATACTTGCAATCATCTACTGCTATGTAAGAAAGAGGTATGGGAAA ...:::..:..:.:.:..x..x.x:------...x...x...:.xx..:....x:.:x---.........:xx.:------.:x.:...:.:..x----.......----------.::..x....:x.....::..:.x.....:.x......:........:..:..:..x:.:.x...x.....xxxx:..........:x:x........x:.x..:.....::.x...x....xx:......xx.x....:x..:x.:.........:...............::... 25M6D27M3D14M6I14M4D7M10I177M 182/264 68.9% 280/94230402 0.0% 29/264 11.0% 28167055 NA +3409 chr4 + 190214555 74315812 74315811 74315894 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTCCAGAGGCTGACACAGGACAATCACTTGAACCCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:.........:x.:.......xx.xx.xx..x.............:..x:xx:..:..... 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -1717385 -92513017 +3259 chr4 + 190214555 74345004 74345003 74345075 72 GCGCCTGTATTCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATTACTTAAACCCAGGAGATGGAGGTTGCGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....x.:.....:.....::........x.xx.x...x:....:.......:..x.xx:..:..::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -1688202 -92542200 +3260 chr4 + 190214555 74373656 74373655 74373731 76 TATATATGTGTTCATATATATTTATATATAAGTAATATTTATAAGTATATATGTATGTATATATA--TAAGTATATAC chr4 + 94230402 81444693 81444692 81444770 81444693 81444692 81444770 78 TACAAATGTGATTAAATGTATTCATATATAAAGAATATAAGCATGTATGTGTGTAAGTATATATAACCAAATCTATAC ..:.x.....x.:.x..:....:........:x.....xx::.x....:.:....x.........--:..:.x..... 65M2I11M 56/76 73.7% 78/94230402 0.0% 2/76 2.6% -7071037 -87159365 +7045 chr4 + 190214555 74381007 74381006 74381141 135 TTTACAGTTCAGACAGAAGACAATCCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACATGAATGGCTATTGTTTGCATGGACAGTGCATCTATCTGGTGGACATGAGTCAAAACTACTGCAGGTAA chr4 + 94230402 46168810 46168809 46168944 46168810 46168809 46168944 135 TCTGCAGTCCAGACAGAGAACAGTCCTCGTGTGGCTCAAGTTGGGATAACCAGGTGCAAGCCTGAAATGAAGGACTACTGTTTCCACGGACAGTGTGTGTACATAGTGGACCTGGATGAGCACTATTGCAGGTAA .:.:....:........::...:...x..............xxx:.....x.:...:.:x:....x.....x.:...:.....x..:........::.x..:x.:......x..::.x.:x....:......... 135M 99/135 73.3% 135/94230402 0.0% 0/135 0.0% 28212197 NA +3241 chr4 + 190214555 74400956 74400955 74401080 125 CTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCTTCCTTTCTTTCTTTTTCTCTTTCTTTCTTTCCTTCTTTCTCTCTTTCTGTCTTTCTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCT--CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:x.....--..:.:....xx:x..:.:....::....:.:x..:....x....xx.....x::.:xxx.::.:x:.:.x..x:xx..........::::::.:...:...::....:.x.:. 10M2D113M 73/123 59.3% 123/94230402 0.0% 2/123 1.6% 10703839 NA +4589 chr4 + 190214555 74400983 74400982 74401096 114 CTTTCTTCCTTTC-TTTCTTTTTCTCTTTCTTTCTTTCCTTCTTTCTCTCTTTCTGTCTTTCTCTTTCTCTCTTTCTCTCTC----TCTCTCTCTTTCTTTCTTTCTTTCTTTCCTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x.....:..-....:xx.x:.:.:.....:......:x..::...x....x......x....xxx.::..x..:.:..----...:.....::.:.::..........:.:.... 13M1I68M4I33M 81/114 71.1% 119/94230402 0.0% 5/114 4.4% 10703866 NA +3585 chr4 + 190214555 74406789 74406788 74406871 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:...:. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -1626408 -92603994 +3333 chr4 + 190214555 74406906 74406905 74406970 65 CCAACAAGAGCAAAACTCTGACTCAAAAAAAACAAAACAACAACAACAACAACAACAAAAACAAG chr4 + 94230402 61993775 61993774 61993838 61993775 61993774 61993838 64 CCAACAGGATCGTAACTTTCA-GAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAG ......:..x.:x....:.x.-xx..:.....x..:..:......................x... 21M1D43M 51/64 79.7% 64/94230402 0.0% 1/64 1.6% 12413131 NA +6603 chr4 + 190214555 74421747 74421746 74421926 180 TCACTATGAAGAAGAAGGAGAGGAAGAAAAAAAAGGAGAAGGAAAAGAGGAAGGGGAAGAGGAGGGGAAGGGGA---AGGAAGATGGGGAGGAAAAGAGAAAGAAGAAAAAAGAAGAAAAGGAGGATGCTAATGGGGAGGAGG-AGGAAAAGGAAGAGAAAGAGGGAAGAAGAGAGGAAGAAAG chr4 + 94230402 84415333 84415332 84415516 84415333 84415332 84415516 184 TTGCTAAGGAGAGAAGGGAGAGTAAATAAAAAAGATTGTAAGAAGAGAGGGAGAAGGAGAATGGGAGAATGGGAGAGAgaaggaaagagagaaaggaatggagaaaggaagggaggaaagaaagaataaagaaggaaaggaggaaggaagaggaagggaggggggagagaggagaggaGAGGAG .::...x.:...::.:......x..:x......::xx.x.:...:.....:..::.:...:x:..:...x....---..:.:..x:.:...:..:::.x::....:::..::..:....:::..:..:xx:.x..::......-.....:......:..::.:..::...:.......::::.. 74M3I66M1I40M 113/180 62.8% 184/94230402 0.0% 4/180 2.2% -9993586 -84236816 +3102 chr4 + 190214555 74421797 74421796 74421860 64 AAGGGGAAGAGGAGGGGAAGGGGAAGGAAGATGGGGAGGAAAAGAGAAAGAAGAAAAAAGAAGA chr4 + 94230402 39594992 39594991 39595055 39594992 39594991 39595055 64 AAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA ....:...:..:.:xxx.......::.::..x....x.::...:.:......:..:...:.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 34826805 NA +3025 chr4 + 190214555 74425143 74425142 74425177 35 ATTAAAAAAAAAAAAAAAGAGAGAGAGAGAATTAA chr4 + 94230402 37997915 37997914 37997949 37997915 37997914 37997949 35 ATTAAAAAAAAAAAAAAAGAGAGAGAGAGAAATAA ...............................x... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 36427228 NA +3442 chr4 + 190214555 74449894 74449893 74449964 71 TGCTCCTGCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTATATATATATGTATGTGTGTGTG chr4 + 94230402 26578249 26578248 26578319 26578249 26578248 26578319 71 TGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....:..x:x::::xx.:...................:...:...:.xx:...:.....x...::..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 47871645 NA +3429 chr4 + 190214555 74449907 74449906 74449960 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTATATATATATGTATGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:...:..xx...:...:.x....:..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 47871641 NA +3259 chr4 + 190214555 74449909 74449908 74449962 54 TCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTATATATATATGTATGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:...:...:x:...:...:.x.:.::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 47871643 NA +3087 chr4 + 190214555 74449925 74449924 74449991 67 TCTCTCTCTTTCTTTCTATATATATATGTATGTGTGTGTGTATGCATTTTTTAAAAACTCCTTTAAA chr4 + 94230402 38817785 38817784 38817851 38817785 38817784 38817851 67 TCTCACTTTTTTTGTCTATGTATAAATGTATGTATATGTTTTTAGTTGATATAAAAATTCCTTTGAA ....x..:...:.x.....:....x........:.:...x.x.:xx.xx.x......:......:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 35632140 NA +10962 chr4 + 190214555 74450070 74450069 74450540 471 GCACATTAAATAATATTGGAATGTATCAACTGCATAACAAATCACTGAACTCATCAGTTGGTCATAAAAG-AAACACAAAGAATGACAAGGCGTGTCTTCTTGAACTATCACACCCAAACTAATCTCAACTTGTTCTTATACTAATAGATCCTTAGTTAGAATGCATTCTGTGTCTCAT-----TATTTAAAATACGAGTATAT---------GGCATAACTTTTTTAATGTTGGAATTAAA--TGGTTCTTTATGATCTGGAGAATAAGCTTAAAACACACCGCACGTTTTTGTGATTATAATTTTTAAATGTGAATTGCTTGCAGATGTCAGCAAGAATATTTCGGTGAACGGTGTGGGGAAAAGTCCATGAAAACTCACAGCATGATTGA--CAGTAGTTTA-TCAAAAATTGCATTAGCAGCCATAGCTGCCTTTATGTCTGCTGTGATCCTCACAGCTGTTGCTGTTATT---ACAGTCCAGTAAGTAT chr4 + 94230402 46184162 46184161 46184641 46184162 46184161 46184641 480 GTAAATTAAGTGCTGATGGAATCTG--AGATGCATAACAAGCCACTGAACTCATCGGTTGGTCATAAACTTGAACCTAAAGAATGGAAAGGTGTGTCCTGCTGGGACATCACACCCAAACTAATCTCGACTTGTTGAAATACTGACAAACCTTCTGCTAGAGCAGTGACTGTGTTCCATAAGCATGCTCCAAGT--GAGCATCTTGAGATTCATGTGCAACTCTGAGGATGTCAAAGTCAGGCTTGACTGTGTGTGGGC---ATCCTTGGCTCCAGACAGTATGGGAGC-----TGATAAGAACTTGTGTTGATG--TTTGTTGCAGGTGTTATCAGGACTATTTTGGTGAACGCTGTGGTGAACAGTTCATGAAGACTCAAAGGAAGAATGATGTGGCAGACTACTCAAAGACTGTGTTGGTCGTGGTAGCTGTCCTGCTCTCCAGCATCAGCTTTGTTGCTGTACTTATCATTGTGATAGTGCAGTAAGTAT .:.x.....:.:x.:x......x.:--.:x..........::.............:............xx-:...x:........:x....:.....:.x:..::x:....................:.......xxx.....:.:.:.:.:.:x.:....:::xxxx......::...-----.::.:x..:.--...:..x.---------x.:::....:.xxx:....:::.:.:.::--..::.x.x.:..:x.---.xxx.x:...:x.:...xxx:.x:x.:-----....x.x..:..x.:xxx:..--..xx......:...:.x..:..x.....:........x.....x...x...:......:.....x..x.x..x...--::.:..x:..-.....:.:..::..:.:x.:x:......:.:.xx.x..::x::.x.x.:.:::x.....xx:.:.:...---.:...x.......... 25M2D43M1I108M5I10M2D8M9I29M2I15M3D27M5D21M2D76M2I10M1I69M3I16M 296/457 64.8% 480/94230402 0.0% 37/457 8.1% 28265908 NA +4117 chr4 + 190214555 74456636 74456635 74456718 83 GTGCACCTGTAGTCTTAGCTACTTGCCAGGCTGAGTCGGGTGGAAAGCTTGAGCCCAGGAGTTCAAGGCTGTAGTGTGTTATG chr4 + 94230402 76033204 76033203 76033286 76033204 76033203 76033286 83 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ......x......:::.........xx........:.xx...:.:x:.....:.....:..:.:x:........x:::.x... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% -1576568 -92653834 +3542 chr4 + 190214555 74476791 74476790 74476854 64 GTTGGGCACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCTGGAGG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x....x....:.:...........:.........x.xx.x...x.:........::..:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -1556410 -92673992 +3219 chr4 + 190214555 74495557 74495556 74495654 98 ATATATACACATATATATACACATATATATACACACATATATACACACACA--TATATATACTCA-CATATACACACACACACACACACACACACACACAC chr4 + 94230402 58675381 58675380 58675481 58675381 58675380 58675481 101 ATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAATTGTAAAGACAGAAAGACATAC ..x.x.......x.x.:..::.............x.....:.:........--:.x.....:.:.-.x.....x:.x.xx:::.x.x...x.x.x...:.. 51M2I12M1I35M 69/98 70.4% 101/94230402 0.0% 3/98 3.1% 15820176 NA +3108 chr4 + 190214555 74495568 74495567 74495643 76 TATATATACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACA chr4 + 94230402 58675366 58675365 58675441 58675366 58675365 58675441 76 TGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATA .:...x.:x..x.:x..x.x:......x.x.::.::..:.......:.....:..:.:.........x..x.:.:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 15820202 NA +3048 chr4 + 190214555 74495570 74495569 74495638 69 TATATACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACAC chr4 + 94230402 54963193 54963192 54963261 54963193 54963192 54963261 69 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .:....:x....:.x..:.....x..............:.xx:.:::x.:.x:.........:x:.:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 19532377 NA +3285 chr4 + 190214555 74495630 74495629 74495678 49 CACACACACACACACACACACACACACACATATATATATATATATATTT chr4 + 94230402 74526077 74526076 74526125 74526077 74526076 74526125 49 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ..............::x...:.....x.:.....::.......:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -30447 -94199955 +3371 chr4 + 190214555 74560525 74560524 74560671 147 GTTATATAATATATATTACGTATATTATATATAATATGGTATATTATATATATT---------ATAT--------ATTATATATATGT------TTTATAATATATATTATATATATTATATATTATATATATATTTTATAATATATATTATATATTAACTAAAATATGT chr4 + 94230402 26320175 26320174 26320338 26320175 26320174 26320338 164 GTTCTGTAATGTA------GTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATAT ...x.:....:..------..:.:.:..xx....x..:x.x.x......:....---------....--------x...x..x...x.------.x....x..:............:......:x......x....x.:..x:xx...x.....x..x.x..xx:...:. 13M6D35M9I4M8I13M6I76M 102/141 72.3% 164/94230402 0.0% 29/141 20.6% 48240350 NA +3117 chr4 + 190214555 74560569 74560568 74560654 86 TATATATATTATATATTATATATATGTTTTATAATATATATTATATATATTATATATTATATATATATTTTATAATATATATTATA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA--GTATTGTATATGTAATA .:......:..:............:xx.x..:.......x.xx...:...:xx...x.....x.x..--x...x:.....:.x... 67M2D17M 61/84 72.6% 84/94230402 0.0% 2/84 2.4% 48240308 NA +3587 chr4 + 190214555 74560725 74560724 74560837 113 TTATATTTTATATATTATATA------TTAACTA--TAATATGTTATATTATATATATTATATATAA-TATATAATATGTTATATTATATATTATATATAATATGTTATATTATATATAATA chr4 + 94230402 38120556 38120555 38120677 38120556 38120555 38120677 122 TTGTATTTGAGATGCTTTAGAAACTTCTAAACTAGTTAATATTTTTGTTTATAGGGAACAAATAAGACTACATAATATGTAATATTATACACTATACATAATATGTAATAATATGTAAAGTA ..:.....x.x..::.x..x.------.x.....--......x..xxx.....x:x.x:.x...x:.-..:.........x........:.:....:.........x...x...:..x.:.. 21M6I7M2I31M1I54M 83/113 73.5% 122/94230402 0.0% 9/113 8.0% 36440169 NA +3011 chr4 + 190214555 74560810 74560809 74560858 49 TATATAATATGTTATATTATATATAATATATAATATGTTATATTATATA chr4 + 94230402 38120624 38120623 38120672 38120624 38120623 38120672 49 TACATAATATGTAATATTATACACTATACATAATATGTAATAATATGTA ..:.........x........:.:x...:.........x...x...:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 36440186 NA +3225 chr4 + 190214555 74560836 74560835 74560884 49 TATATAATATGTTATATTATATATTATATATAATATGTTATATTATATA chr4 + 94230402 38120624 38120623 38120672 38120624 38120623 38120672 49 TACATAATATGTAATATTATACACTATACATAATATGTAATAATATGTA ..:.........x........:.:....:.........x...x...:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 36440212 NA +3225 chr4 + 190214555 74560862 74560861 74560910 49 TATATAATATGTTATATTATATATTATATATAATATGTTATATTATATA chr4 + 94230402 38120624 38120623 38120672 38120624 38120623 38120672 49 TACATAATATGTAATATTATACACTATACATAATATGTAATAATATGTA ..:.........x........:.:....:.........x...x...:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 36440238 NA +3426 chr4 + 190214555 74561065 74561064 74561201 137 ATTTATATACTTTATATAATATATAATTTATAATTTATAGAATATATAATACATAATTTATATAATATATAATATATAATATATAATTTATATAATATATAATGTATACAATAATCTATATA-ATATAATATATATTA chr4 + 94230402 46018827 46018826 46018945 46018827 46018826 46018945 119 ATTCATAGATCGTATATGGTATATGCTGTG-----------ATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATAT--------TAGTCGTATGTATAGATATGATAAAGGTTA ...:...x.::x.....::.....:x.x.:-----------......:...x...xxx:.............x.x........:.:.x:...x.......--------:.:.x:.x.:....-....:...x.x:... 30M11D59M8D14M1I15M 84/118 71.2% 119/94230402 0.0% 20/118 16.9% 28542238 NA +3209 chr4 + 190214555 74565239 74565238 74565308 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCCGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:...........::....:...x.xx.x...xx:.x.........:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -1467958 -92762444 +3109 chr4 + 190214555 74578184 74578183 74578242 59 GCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAATGAAAATTCA chr4 + 94230402 88382708 88382707 88382766 88382708 88382707 88382766 59 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACA ..:.x:.........xx.x.........::.:...............x..::..::x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -13804524 -80425878 +3067 chr4 + 190214555 74589513 74589512 74589579 67 AAAGAGAGAGAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGGAGAGAAAGAAAGATAGAGAAAGAA chr4 + 94230402 59054335 59054334 59054401 59054335 59054334 59054401 67 AGAGAAATAGAGAAAGGAAAGGAGAAAAGCAGATAGAGAATGAAGGGAAAAACAAACAGACAAACAA .:...:.x....:........:..:..:.x..:x..:..:x.:..:....:.x.:.:...x...x.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 15535178 NA +3959 chr4 + 190214555 74589532 74589531 74589669 138 AGAAGGAAGGAAGGGAGGGAGGGGAGAGAAAGAAAGATAGAGAAA---GAAAGAAGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGA chr4 + 94230402 14751870 14751869 14752007 14751870 14751869 14752007 138 AGAAGAAATAAATTGAGGTAGTGGGGGAAAG---AGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAA .....:..x:..xx....x..x..:.::..:---..:.:.....:---....:x.::.x.x...::x.:.:::....:..:..xx.:......:..:...x::....x....:x:...xx...::...x.:.....::.:. 31M3D11M3I93M 85/135 63.0% 138/94230402 0.0% 6/135 4.4% 59837662 NA +3299 chr4 + 190214555 74589551 74589550 74589618 68 AGGGGAGAGAAAGAAAGATAGAGAAAGAAAGAAGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAA chr4 + 94230402 29014670 29014669 29014737 29014670 29014669 29014737 68 AGTAAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ..x::..x...:..:xx...:..:....::.:..:::.......:...:..........:...x.:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 45574881 NA +3337 chr4 + 190214555 74589571 74589570 74589739 169 GAGAAAGAAAGAAGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGA----------AAAGAAAGAA--------------AAAAAGAAGGAAAAGAAAGAAAGAAAAGGAAGGAAGGAAGAAGGGAAGGAAGCAAGGAAGGGGGAGAAA chr4 + 94230402 38078777 38078776 38078969 38078777 38078776 38078969 193 GAGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAACCCATAAGCATGACCTACCTACTACTGCAAGTATGTGTTTTATTCTTGAGAGATATTAAGGGTAATAGAACAATAAGAGTAAGAAAGAAGAGTAAGGAGCTGTGAAAGGGAAGAAA ...x......:.:.........:.:....:.::..::.x.x..:.:..xx:xx:x...:.:..x....:...:...:xxx:x...x.x..----------.xx.x...x.--------------:.:.::x.xx..::.x..x.:.:x..x:::..x...:......:.x.:.:...x:x...:...:..... 90M10I10M14I69M 102/169 60.4% 193/94230402 0.0% 24/169 14.2% 36510794 NA +3018 chr4 + 190214555 74589575 74589574 74589635 61 AAGAAAGAAGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAG chr4 + 94230402 26216011 26216010 26216071 26216011 26216010 26216071 61 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG ..x.:x...:...............x.:.:.:.:::.......:.x::...:.::....:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 48373564 NA +4457 chr4 + 190214555 74589578 74589577 74589725 148 AAAGAAGGAAAGAAAAAGAAAGAGAGA---AAGAAGAAAAGAAAGAAAGGAAGAAAGAAA-------GGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAAGAAAGAAAGAAAAGGAAGGA-------AGGAAGAAGGGAAGGAAGCAA chr4 + 94230402 49044653 49044652 49044817 49044653 49044652 49044817 165 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAA .....xx:..:::.......x:.....---::.:x.:xx.......x.:.x..x:....:-------x..::..:.:....:xx..........:.:.::x:.....x...:............x...:x:...::x-------.......:..:..:x:..... 27M3I30M7I70M7I21M 99/148 66.9% 165/94230402 0.0% 17/148 11.5% 25544925 NA +3737 chr4 + 190214555 74592938 74592937 74593141 204 AAAAGAAAAAGAAAAAGAAAGAAAGAG--AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA----------GAAAGA----------------------------AAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAA---GAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 8397341 8397340 8397587 8397341 8397340 8397587 247 AAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAG ..:......:x.:x..x.x..x...x.--..:..:...::.x:.......:.x::.x..x.:....----------....x.----------------------------:.x.:..xx.....:...x:...:....:..x.:.:x::...::..x:..x:.::x.....x:....:..:...x...:---:..:..x:x:::.x.:..:....xx..:..:..:.::..x.::.::.x..:.:.. 27M2I37M10I6M28I79M3I55M 124/204 60.8% 247/94230402 0.0% 43/204 21.1% 66195597 NA +3371 chr4 + 190214555 74592943 74592942 74593052 110 AAAAAGAAAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAA---------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAG------AAAGAAAGAAGAAAGAGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .:......:...xx.x.:.............:.:.:.x....:---------....x::.:x.x.:.:.:x:::.::...:....:.:..:..::..x..------:...x.x....:...:... 43M9I48M6I19M 72/110 65.5% 125/94230402 0.0% 15/110 13.6% 23444564 NA +3214 chr4 + 190214555 74592953 74592952 74593070 118 AGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGA----GAGAAAGAAAGAAAGAGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........::..xx.x.......:...:.........x.:.::---.::.xx....x::.:x.x.:.:.:x..:.....:...:::.:..:..:.:.x::x.----..::x.x:...:...:... 43M3I56M4I19M 73/118 61.9% 125/94230402 0.0% 7/118 5.9% 23444574 NA +4031 chr4 + 190214555 74592958 74592957 74593169 212 GAAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA--GAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA------AAGAGAAAGAA chr4 + 94230402 59372544 59372543 59372754 59372544 59372543 59372754 211 GAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAA--AGGAAAAATAATAATAATAATGAGGGGG-------GCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA ....xx.:....:..x:.x:x:.:.::.::x.:x.:...:....:.x.--.....x..x:..x..x...--.:....:.x.:x..x..x..x...:.:.-------.x:..:.:.::.....:...x..x.:....:..:.x..x..x.::.:.:x.::x.:x..:.:::...x..x:.x..:......x..x:..:.:x.:.------.....:..:.. 48M2I19M2D28M7D97M6I11M 123/203 60.6% 211/94230402 0.0% 17/203 8.4% 15220414 NA +3135 chr4 + 190214555 74592965 74592964 74593046 82 AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..::.::.......x..x...x...x....x.:..:..xx.x.:.x.............x:x.:::..x....:.:..x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 33480787 NA +4009 chr4 + 190214555 74592983 74592982 74593104 122 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGA-AAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAG--------AGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....:x.xxxx....x.-..x......:.:x....:x.xx.:.:xxx..:...:--------.x:....:....x....:.x........:...:..... 48M1I36M8I38M 85/122 69.7% 131/94230402 0.0% 9/122 7.4% 20581390 NA +3012 chr4 + 190214555 74593018 74593017 74593092 75 GAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGA chr4 + 94230402 62301307 62301306 62301381 62301307 62301306 62301381 75 GAAATTAAAAGGAAAGTGGGGAAAAGGCAGGAGAGACTGAGAATGGAAGGGAAAGAGAAGGAAATGGCAGAGGGA ...:xx.:..:.....x::.:..:.:.x.:......xx:....x.:...:..:......:....x::x...:... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 12291711 NA +3002 chr4 + 190214555 74593040 74593039 74593128 89 AGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 6681993 6681992 6682081 6681993 6681992 6682081 89 AAGAGAAATAAAGAAAATGAAAGATAAAAACAGAGCAAGAAGGAAAAGGGAATGTGATAGGACTAGTAGGATAGGAAGTACATGAGAAA .::.....x.:...:..x......x.:.:.x....x.....:......::::x:x..x..:.xx..x.:..x..:...x.x:x:..... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 67911047 NA +3047 chr4 + 190214555 74593065 74593064 74593140 76 AGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 71601026 71601025 71601098 71601026 71601025 71601098 73 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGA---AAAGAAAGAAA ..::......:...:...x......x:..x...x:...:..:.x...x:x:.:x.x......---........... 62M3D11M 53/73 72.6% 73/94230402 0.0% 3/73 4.1% 2992039 NA +3305 chr4 + 190214555 74706506 74706505 74706599 94 CCTGGGTTCAAATTCTGCCTCTGCCATCCACTTGCTGGGTGACTTTGAACAAATTATTTAGCCTCTCTGTACCTTGCTTCCTCATCTATAAGAA chr4 + 94230402 79898254 79898253 79898347 79898254 79898253 79898347 94 CTTAAGTTCATTCACCAGCTCTGCCACTGACCTGCTGGCTAACTTTGGAGAAATTGCTTCATCTTTCTATTCATGAATATTTCATCTGTAAAAA .:.::.....xx:x.::x........::x..:......x.:......:.x.....::..x::..:...:.x.x.x:x.x::......:...:.. 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -5191748 -89038654 +3054 chr4 + 190214555 74791213 74791212 74791284 72 GTGCCTGTTGTCCCAGCTACTCGAGAGGCTGAGACAGGAGAGTCACTTGAGCCCTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x...x..:.........:..:........x.xx.x..:x.......:...x.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -1241993 -92988409 +3233 chr4 + 190214555 74795204 74795203 74795291 88 TGTTTCAAAACAACGACAACAACAACAACAACATCAGCAACAAAAAAAAAAAAAAAAAAAAAGAAAAGAAATG-AAAAAAGTCTTCAAG chr4 + 94230402 5941501 5941500 5941589 5941501 5941500 5941589 89 TGTTCCCAAGTTAAAACAACACAGAATACAACAACAGCAACAAAAAAAAAAAAAAAAAACATGCCCAAATGTACACAAAAACTTTCAAG ....:.x..::x.x:......xx:.xx......x.........................x.x.xxx.:.x:.:-.x....:::...... 73M1I15M 62/88 70.5% 89/94230402 0.0% 1/88 1.1% 68853703 NA +3152 chr4 + 190214555 74795205 74795204 74795262 58 GTTTCAAAACAACGACAACAACAACAACAACATCAGCAACAAAAAAAAAAAAAAAAAA chr4 + 94230402 43882932 43882931 43882989 43882932 43882931 43882989 58 GCTTGTAAAGAATGATAGCAACAACAAAAACATCAGCATCAACAAAAAAAGTGAAAAA .:..xx...x..:..:.:.........x..........x...x.......:x:..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 30912273 NA +3089 chr4 + 190214555 74795211 74795210 74795275 65 AAACAACGACAACAACAACAACAACATCAGCAACAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAT chr4 + 94230402 83870612 83870611 83870676 83870612 83870611 83870676 65 AGGCTATGACAATAACAACAACAACAACAAACTGAACAAAAAAAAAAAAAAGGAGAAAAGGATAT .::.x.:.....:.............x..:xxxx..x..............::.::...:..x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -9075401 -85155001 +3285 chr4 + 190214555 74866481 74866480 74866548 68 AATTCAGATTTTTTTTTTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAATATGTAA chr4 + 94230402 85834520 85834519 85834587 85834520 85834519 85834587 68 AGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAA .:..::.:......x..::x......x.................:.xx:...:x.::x.x........ 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -10968039 -83262363 +3011 chr4 + 190214555 74878390 74878389 74878426 37 AAAACAAAAAACAAAACAACAACAACAACAAAAAAAA chr4 + 94230402 79648968 79648967 79649004 79648968 79648967 79649004 37 AAAACAAAAAACAAACAAACAACAACAACAAAAAAAA ...............xx.................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -4770578 -89459824 +3264 chr4 + 190214555 74878390 74878389 74878444 55 AAAACAAAAAACAAAACAACAACAACAACAAAAAAAAAAAACTGCTCTTAGGTGT chr4 + 94230402 78781390 78781389 78781444 78781390 78781389 78781444 55 AGAGCAAAAAACAAAGCAACAACAACAGCAAAACAAAAACACTTCCCTGTTGTGT .:.:...........:...........:.....x.....x...x.:..xxx.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -3903000 -90327402 +3049 chr4 + 190214555 74878391 74878390 74878430 40 AAACAAAAAACAAAACAACAACAACAACAAAAAAAAAAAA chr4 + 94230402 49372049 49372048 49372088 49372049 49372048 49372088 40 AAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAA .............x......:..:......x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 25506342 NA +3221 chr4 + 190214555 74880937 74880936 74881052 116 AGGAGAGAGAGAAGGAAGGAAGGAAAG--AAAGAAAGAGAAAGA------------------------AAGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAGAAGAAAGGAAGAAAGAAAGGGAGAAAGAAAGA chr4 + 94230402 1317349 1317348 1317490 1317349 1317348 1317490 142 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGA ..::x......x..::...x.x:x...--..:..x:........------------------------:..:.....:.....:......:.:......x.:xx...:x..::.:x....:x:..xx...::.:.:.:.... 27M2I15M24I74M 77/116 66.4% 142/94230402 0.0% 26/116 22.4% 73563588 NA +3089 chr4 + 190214555 74880939 74880938 74881017 79 GAGAGAGAGAAGGAAGGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAA chr4 + 94230402 75241508 75241507 75241586 75241508 75241507 75241586 79 GACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ..x..::.:x.....xx.x:..x.........:..:..........:...x.::.xx.:......x.:..x:x...::. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -360569 -93869833 +3302 chr4 + 190214555 74880942 74880941 74881021 80 AGAGAGAAGGAAGGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAGA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..:.::x.....xx.x...x.......:....:..........:...x..:.xx.:....::x.:..x:x...:.. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -360565 -93869837 +3293 chr4 + 190214555 74880969 74880968 74881058 90 AAGAGAA----AGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAGAAGAAAGGAAGAAAGAAAGGGAGAAAGAAAGATGGTGG chr4 + 94230402 85790943 85790942 85791036 85790943 85790942 85791036 94 AAGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAACCCAGAAGATGG .......----...xx:......::.....:.......:....::.:.:.:::.x:...::..:.x::..x.x:........xxx...x.:... 7M4I83M 60/90 66.7% 94/94230402 0.0% 4/90 4.4% -10909974 -83320428 +3016 chr4 + 190214555 74936437 74936436 74936471 35 TGTTTTTTTTTTGTTTGTTTTTTTGTTTTTTTTTT chr4 + 94230402 63648348 63648347 63648382 63648348 63648347 63648382 35 TGTTTTTTTTTTGTTTGTTTTTTTGGTTTTTTTTT .........................x......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 11288089 NA +3467 chr4 + 190214555 74948882 74948881 74948982 101 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGACCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:--.::.x....:.:...........::........x.xx:x...x.:...........:..x:xx:..:..:..------..x..x...... 9M2D72M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% -1084315 -93146087 +3353 chr4 + 190214555 74992280 74992279 74992355 76 GGCAAAGTAATAGAACGTTTTCAAAATAAAACGAAGAAAATAAAACAAAAAATAAACAAAATAACAGAGCAGCAAT chr4 + 94230402 32375655 32375654 32375727 32375655 32375654 32375727 73 GGCAAAGTAGTGAAACTTTTTCAAAATAAAACGGAACA---AAAAAGAAAAGAAAAAAAGCCCACAGAGCAATAGT .........:.::...x................:.:x.---....x:....:x...x..:x:x........::.:. 38M3D35M 54/73 74.0% 73/94230402 0.0% 3/73 4.1% 42616625 NA +3051 chr4 + 190214555 75084888 75084887 75084951 64 GGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 1500702 1500701 1500765 1500702 1500701 1500765 64 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAA .....::.....:.:x..::.....:.:x..:..:.:.......::..:x.:.:..:.:..:.. 64M 42/64 65.6% 64/94230402 0.0% 0/64 0.0% 73584186 NA +3258 chr4 + 190214555 75085672 75085671 75085747 76 CCTGTTCATTCTGAT-GGTAGTTTCTTT------------TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCTATTTGTCAATTTTG chr4 + 94230402 52780422 52780421 52780510 52780422 52780421 52780510 89 CCTGTCCTTGCTGACAGGCAGCTACTCTAACATCACTTGCTGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.x.x....:-..:..:.x..:.------------.....:.....:....:......:.:x.xx.x................. 15M1I12M12I49M 59/76 77.6% 89/94230402 0.0% 13/76 17.1% 22305250 NA +3003 chr4 + 190214555 75091897 75091896 75091932 36 TTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 55690047 55690046 55690082 55690047 55690046 55690082 36 TTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT .....x........:..................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 19401850 NA +5104 chr4 + 190214555 75122419 75122418 75122802 384 AGGAGAGGGGAGAGGGAGGGAGGGAGAGAG---GGAAGGAGAGAGGGAAGGAAACAGGGGAGAGAGGGAGGGAAGGA------AGGATGGGAGAGAGAGA--------AAGGAAGAGA----------AAGAAAAAGAAGAAAG---TAAGAGAGAAAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAAGAAAGAAATAGAGAAAGAAA--------GAATAAGAAGAAG------GAGGGAGAGGAGGAGGGAGGGAAGGAA-----GGAAGGAAGGAGAAGAGAGGAAAGAAAGAGACAAAGAGAAAGAAAGAAAGGAAAGAAAGAGAGAGAGAAAGAAAGAATAAGAAGAAGGAG--GGAGAGGA chr4 + 94230402 1405520 1405519 1405942 1405520 1405519 1405942 423 AAGAGCAGAAAAAGGTTTGGAGGGAGAGAGAATGAAAGAAGAGCTGAATGGAAA-AGGTGGTCTCGGGTGGAACAGAGCCTGTAGGACTGAAACTGAAGGTTGTTATGAGGGTAAAGACTTCTCTTTAAAGAGAACGATGAAAACTTTCAGAGACAAAAGGAAAACGTAGATG-----------AGAGGTAAAGGAAATGAAACAGAAAATGAACATGAGAGCCAGCACCTCAGAAACAGGACCGGAAACAAACAGGAGATGTAAAGATAAAGGAGTTCTGCCTGTGTAAGTGGAGGTCTGCAGCGCCAGAGGGGGCAAGAAGACAGGACTGCTTAGAAGGAAAGAAATGAGAAGAGATGGAGAGGTTTATGAGGACTGGGAAAGGGAAGATATGGGGAAGACATCAAAGAACAAGAAGAGGGAGGTGGAAAGGA .:...x:.::.:...xxx............---.:...:....xx.:.x.....-...x.:xxxx...x..:.x:..------....:x.:.:xx::..:--------.:..x.:...----------....:..x..x....:---.x.....x...:::.:..x:x...x:-----------...::x:......:x....x...:..x..:x:x.:...xx..x.xxxx..:..x::...x.:...x:.:x.:..:.x:x.x...x....:.:--------.x:....x:..:.------.x.xx.....:..x::..:.:x....x-----:.......:..:.x....:..:.x::....::xx.x::::.xx::......:....x.x:.:..:::x.xx......:.......:....--...:.... 30M3I21M1D22M6I17M8I10M10I16M3I26M11D92M8I13M6I27M5I90M2I8M 228/372 61.3% 423/94230402 0.0% 63/372 16.9% 73716899 NA +3618 chr4 + 190214555 75122485 75122484 75122576 92 GGGAAGGAAGGATGGGAGAGAGAGAAAGGAAGAGAAAGAAAAAGAAGAAAGTAAGAGAGAAAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAA chr4 + 94230402 58935726 58935725 58935814 58935726 58935725 58935814 89 GAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAA---AGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA .:....:..:x.xx.:xx.::..:...x......:...:....x..........---..:.....::..x..x.x...:..:.....:::.. 54M3D35M 62/89 69.7% 89/94230402 0.0% 3/89 3.4% 16186759 NA +3987 chr4 + 190214555 75122517 75122516 75122651 135 AGAAAGAAAAAGAAGAAAGTAAGAGAGAAAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAAGAAAGAA chr4 + 94230402 8397450 8397449 8397584 8397450 8397449 8397584 135 AGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAA ...x...:xx.....:....:........:..x.:.:x::....:..x::.x:::.x:.:..x...::::::...x.:..x.x:.:...x.x:...x:...:....xx....:.x..:::.:x....:.:x.:.. 135M 79/135 58.5% 135/94230402 0.0% 0/135 0.0% 66725067 NA +3370 chr4 + 190214555 75122536 75122535 75122605 70 TAAGAGAGAAAG-AAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGA chr4 + 94230402 48632620 48632619 48632690 48632620 48632619 48632690 71 TAATACAGAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA ...x.x......-.:.:.:......x.::.::.....::...x.........x.:....:x....:..... 12M1I58M 52/70 74.3% 71/94230402 0.0% 1/70 1.4% 26489916 NA +3689 chr4 + 190214555 75122545 75122544 75122690 146 AAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAAGAAAGAAATAGAGAAAGAAAGAATAAGAAGAAGGAGGGAGAGGAGG chr4 + 94230402 84536568 84536567 84536713 84536568 84536567 84536713 146 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGG ...::.:.:.:..::..:.:.:x..x...:.x......x:.:.:...:..:.....:......:..:::xx.x.x.:x:..:xx::...xx:...x:xxx:.:.....x.x.:.x....:.:.:x:.:..:.:...:xx:..:... 146M 82/146 56.2% 146/94230402 0.0% 0/146 0.0% -9414023 -84816379 +3755 chr4 + 190214555 75122559 75122558 75122708 150 AAAGAGAGAAAGA-AAGAAAGGAAGGAAGG---GAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAA----GAAAGAAATAGAGAAAGAAAGAATAAGAAGAAGGAGGGAGAGGAGGAGGGAGGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044817 49044660 49044659 49044817 158 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAA .......:..::.-....:.xx.:..:x..---......x.::x..x....:.x.xx:..x:..:....:.:...x:.:.:.....::..----....:.x:x.:::...........:.::x::.::.xx....xx....:.::..:..:x:..x.. 13M1I16M3I57M4I64M 93/150 62.0% 158/94230402 0.0% 8/150 5.3% 26077899 NA +3035 chr4 + 190214555 75122567 75122566 75122626 60 AAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAG chr4 + 94230402 62475715 62475714 62475774 62475715 62475714 62475774 60 AAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ....:..:...::.:..::.....x...............::.x::...::x.::.:... 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 12646852 NA +4860 chr4 + 190214555 75122712 75122711 75123042 331 AGGAGAAGAGAGGAAAGAAAGAGACAAAGAGAAAGAAAGAAAGGAAAGAAAG-AGAGAGAGAAAGAAAGAATAAGAAGAAGGAGGGAGAGGAAGA--AGGAAGGAAGGAAGA---GAAAGGAAAGGGAGAGACAAAGAAAGAGAAGGAGGAAGA-GGAGGAGGAAGGAG-GAAGGAATGAAGGGGAAGAGAGGAAAGA-------AAGAGAAAAAAGAAAGAAGGAGAGAGAGAAGGAGGAGGAGGAAGAAGAAAAGGAAGGAAGGAAGGAAAGAAAGAAGGGAAGGGAAGATGGGGGAAGGGAAGAAGGGAGGGGAATGGAAGAAGGGATGGGAGG---GAAAGAGGA chr4 + 94230402 28204462 28204461 28204799 28204462 28204461 28204799 338 AGGATGAGAGTAGACAGAGAGAGGACAAG-GAAATATTGAAAGTTAAGTGCGTAGATAGAGTCAAAAAGACTGTGAAACCAAGATGAGAAAAAGGTTAGTGGTGGAGTAAGATTTGAACAGTGAGGGGTAAAATTGGACTGCAGAGCTGCGAGATGGATTAGGAGAGATCAAAGGCATCAGAGCCAAGAGAGGAAAGAAAAAGGAAGGAGAAAATAGTAAAGAAGCGAGACAGAACGATCAGGCTGAAGAAGAGCAGGAAAAGTGGGAGG----------GTGTGGTGGCGGTgggggaaacaaacaacagaaaaggaagtgagagatgaaggcaaaattgaaaaagaa ....x:....x:..x...:....:xx...-....x.xx.....xx...x:x.-...x....xx.:.....x.:x...:xx::::x....::...:--..x::x.:..x....---...x:.x:....:x.:.xxx:..xx.x::..xx.x:...-...xx....::..x-:....x..x.::.xx.............-------.:.......x..x..::.:.x....x....x..xx...xx........:x.....:::x..:...----------.x.x:.x.:x.:........:x:..x..x:..:::.:.x.x:...::x..x..x.::---....:..:. 29M1D22M1I42M2I15M3I39M1I14M1I28M7I65M10D57M3I9M 198/320 61.9% 338/94230402 0.0% 29/320 9.1% 46918250 NA +3164 chr4 + 190214555 75122905 75122904 75122991 87 AGAAAAAAGAAAGAAGGAGAGAGAGAAGGAGGAGGAGGAAGAAGAAAAGGAAGGAAGGAAGGAAAGAAAGAAGGGAAGG-----GAAGATGG chr4 + 94230402 39003015 39003014 39003106 39003015 39003014 39003106 92 AGCAAGCAGAAAGAAAGGGAGGAGAATGGAGGGGGGGGAAGGAAAAAAAGGAAGACCGAACATAGGAAACTGTGGAAGACTTTCAAAGATGG ..x..:x........:.:...::::.x.....:..:.....:.:....:.:.:..xx...x:x.:....xx:x.....:-----:....... 79M5I8M 58/87 66.7% 92/94230402 0.0% 5/87 5.7% 36119890 NA +3211 chr4 + 190214555 75186546 75186545 75186611 66 GTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:...........::........x.xx.x...xx:.x.......:.:.. 6M2D58M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -846655 -93383747 +3075 chr4 + 190214555 75187028 75187027 75187139 112 CATATCTATGTGTATATATATATATACATATCTATGTGTATATATATATATACATATCTATGTGTATATATATATATACATATCTATGTGTATATAT----------ATATACATATCTATG chr4 + 94230402 91734601 91734600 91734722 91734601 91734600 91734722 122 CATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACTTCAAATACTCATTTATG .....xx..:...x.x:x...:x.xx:....:....::...:...xx...x.x.x:....::x:x...:...:.x.x......x:...x........----------.x....x:..:.... 97M10I15M 74/112 66.1% 122/94230402 0.0% 10/112 8.9% -16547573 -77682829 +3097 chr4 + 190214555 75187201 75187200 75187272 72 ACATATCCGTGTGTGTATATATATATACATATCCGTGTGTGTATATATATATACATATCTGTGTGTATATAT chr4 + 94230402 55694437 55694436 55694508 55694437 55694436 55694508 72 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x..x.x:x...x:x.:...::.......:x.:.........:.:...x:x...:.x:............ 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 19492764 NA +3095 chr4 + 190214555 75236818 75236817 75236947 130 TGAAGAAGATCTCACTAGCCACAATTAGGAATAATTAATAGCAACTAGGAACAATAAATG----------ATAGCAGCAATTGTAATCCACTGAATAAACAGAAATTCATGAGTCCAAGCTGATATAAATAAGTGAATAA chr4 + 94230402 74311225 74311224 74311356 74311225 74311224 74311356 132 TGAGAGAAGTTCCACTTTTTATAAATAGAAA--------AATATTTACAGACAATGATTGCACAGACAACATAGCATTTGTTGTATTGCACTGAATAAACAGAAGTCCATGAATAAGAATGAATACAGGTCAGAAAATAA ...:::.::.::....xx::.:..x...:..--------.::.x:..x::.....:.x..----------......x:x:.....x.x................:.:.....:.xx:.::x:...:.::.x..x:..... 31M8D21M10I70M 77/122 63.1% 132/94230402 0.0% 18/122 14.8% 925593 NA +3164 chr4 + 190214555 75266333 75266332 75266410 78 AAATAAAATAAAATAAATCA-TGCATATTCTCATACACACATATATATCATATATATATATATACACATACACACTTTT chr4 + 94230402 1400161 1400160 1400239 1400161 1400160 1400239 79 AAGGAAAAGAGCATATTTCACTGTGCTCTCTCATGAAAACATACCAAGCATATATATATATATACACACACACACATTT ..:x....x.:x...xx...-..:::x:......:x.x.....:xx.x....................:......x... 20M1I58M 57/78 73.1% 79/94230402 0.0% 1/78 1.3% 73866172 NA +3231 chr4 + 190214555 75301702 75301701 75301741 40 CTCTCCATCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.:x................................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 53653 NA +3270 chr4 + 190214555 75301704 75301703 75301743 40 CTCCATCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:.x................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 53655 NA +3002 chr4 + 190214555 75301709 75301708 75301743 35 TCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ................x.......:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 62700404 NA +3136 chr4 + 190214555 75301709 75301708 75301749 41 TCTCTCTCTCTCTCTCACACACACACACACACACACTTCTA chr4 + 94230402 12601307 12601306 12601347 12601307 12601306 12601347 41 TCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTA ......................:..........x.x.x... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 62700402 NA +3398 chr4 + 190214555 75318451 75318450 75318541 91 AATAAATACTAAAAAAAAAAAAAAAAAAAAAA-AATCACAAGCATTCCCATAAACCAATAACAGACAAACAGAGAGCCAAACCATGAGTGAA chr4 + 94230402 32995681 32995680 32995771 32995681 32995680 32995771 91 AATGAATACTAAAAAAAAAAAGGAAAAAAAAATAGTTATATG-GCTACCAGAAACCACAAACAAACAAAAGCAGAACAAACTCACTGATAAA ...:.................::.........-.:.:.:.x.-::.x...x......xx....:.....x:x...:.x..x:..:x::.:.. 32M1I9M1D49M 64/90 71.1% 91/94230402 0.0% 2/90 2.2% 42322770 NA +3019 chr4 + 190214555 75326253 75326252 75326315 63 TGCACCTGCAGCCCCAGCCACTTGGGAGGTTGAGGTAGGAGAATAGCTTGAGCCCAGGAGTTT chr4 + 94230402 76033205 76033204 76033267 76033205 76033204 76033267 63 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT .....x..:..::.....:.....::...:....x:xx.x...xx:.....:.....:..:.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -706952 -93523450 +3202 chr4 + 190214555 75451381 75451380 75451441 61 TATACACACGTGTGTGTATATGTGTATATACATACATATATATATATATATATATATAAAC chr4 + 94230402 40402331 40402330 40402390 40402331 40402330 40402390 60 TATACACG-GTGCGTGTGCATGTATATATCCATACAGATAGATATAGATATGCATGTGAAC .......:-...:....::....:.....x......x...x.....x....::..:.:... 8M1D52M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% 35049050 NA +3248 chr4 + 190214555 75451796 75451795 75451881 86 AGGCTTAAATATATATGGAACAATAACTGACAGAACATGGGGAGAAAAAAAATTAGTCATTCTACATGCAGATTTGTGATTGTTAA chr4 + 94230402 82418699 82418698 82418784 82418699 82418698 82418784 86 AGGCTGCAAACTCTACAGAACAATAGCAAACAAAATACAGGGGGAAAAAAAATTAGTCACCCCTTCCAATGGCCTGTGACAGCTAA .....xx..xx.x..::........:.x:...:..:.::...:................::.:x:x::xx.:::.....:x.:... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -6966903 -87263499 +3401 chr4 + 190214555 75457728 75457727 75457834 107 AAAAAGCTTTTAGAAAAAAAGCATCAGAATAAAACAATTTACTGCATATACCAAGACATATAAGATTTTAGGACTCTCACAATTTCAGAATACATATTAATAACATA chr4 + 94230402 46006317 46006316 46006416 46006317 46006316 46006416 100 AAAAAGATTTTAAAAAGGAGGCAAAAAAATAAAGTAATTTACTGCATGT------ATATTTAAAATGATTCTACTCTCAC-TTTGAAGAAATAATAAAAATAACATA ......x.....:...::.:...xx.:......::............:.------.:..x...:..xx.xxx........-x..xx....xxx...xx......... 49M6D25M1D26M 73/100 73.0% 100/94230402 0.0% 7/100 7.0% 29451411 NA +3231 chr4 + 190214555 75486839 75486838 75486921 83 CGTAGTGGTGTGCGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATTGCTTAAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......::..--......:.........:.::........x.xx:x...x::...:.....x.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -546358 -93684044 +3492 chr4 + 190214555 75488946 75488945 75489017 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:.........x.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -544260 -93686142 +3838 chr4 + 190214555 75545012 75545011 75545121 110 AACCTCTCTGTGCCTCGGTTTTCTCATCTCTAAAATGGGGATGACAATAG-TAACTACCTCATTGGGTTGTTTTAAGAATTACATGACTTAATGTATGTCCA--ATTCTTAGA chr4 + 94230402 83501160 83501159 83501271 83501160 83501159 83501271 112 AACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAG-GCTAAATCAATTCCTGTTTATTCAGGATCTTCAGA .....x.x........:......:..:..x........:.x...:.:..:-..x........:x...x.:..x.:..-::..x..x.x..xx...x.:.:..--..::.:... 50M1I26M1D24M2I9M 78/109 71.6% 112/94230402 0.0% 4/109 3.7% -7956148 -86274254 +3077 chr4 + 190214555 75554515 75554514 75554569 55 TTTAGTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTCCATGATACCCAGGAAAATG chr4 + 94230402 25903017 25903016 25903071 25903017 25903016 25903071 55 TTTACTATGGCCTTTTTTTTTTTTTTTTTACTTTTCCATAGCACATATGAAAATG ....x.x..x:..................x:........:::..x:.x....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 49651498 NA +3959 chr4 + 190214555 75561718 75561717 75561789 72 GCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........::.:........x.xx.x...x.............:..x.xx:.....:.. 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% -471488 -93758914 +3404 chr4 + 190214555 75563342 75563341 75563425 84 AAAGGTAAGGCTTGATTACATTTTACATATGGGTACATATAAATGTGTGTATGTGTATAAACATATGTATGTACATATATATCT chr4 + 94230402 63972307 63972306 63972390 63972307 63972306 63972390 84 AAAGGGGGAGTCTAACTACATTTTATATATGGATGTATGAAAATGTGTGCATGTTTACTTATATTTATCTATACAAGCAAATTT .....x:::.::.:.:.........:......:.::..:x.........:....x..:xx.:..x.:.x.:....x::.x..:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 11591035 NA +3614 chr4 + 190214555 75570654 75570653 75570760 107 TTGGAAAAATTTTAAATGCTACCATGTGGTGGCACACA--------CCTGTAGTCCCAGCTACTCGGGAGGCTAAGACAGGAGAATCGCTTGTACCCGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033163 76033162 76033277 76033163 76033162 76033277 115 TTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.x.xx....::.:x.x:x.:..::.....--------.x......:.........:.::.....:..x.xx.x...x.:....x....:.:..x:xx:..:..... 38M8I69M 71/107 66.4% 115/94230402 0.0% 8/107 7.5% -462509 -93767893 +3186 chr4 + 190214555 75571623 75571622 75571719 97 TGGTTTTTTTAGAGATTTTTGTCCAT--TTTGATCTTTTTTTTGTTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGG chr4 + 94230402 33814249 33814248 33814347 33814249 33814248 33814347 99 TGTTTCTCTTAGTTATTCTTCGAAATGATTTGCACTCAGGTTTGTGGGGTTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGGAACAGGG ..x..:.:....xx...:..xxxx..--....xx..:xxx.....x.x..x..........xxx........x...x...x....x.....::...... 26M2I71M 69/97 71.1% 99/94230402 0.0% 2/97 2.1% 41757374 NA +3150 chr4 + 190214555 75571644 75571643 75571714 71 TCCATTTTGATCTTTTTTTTGTTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 37743673 37743672 37743743 37743673 37743672 37743743 71 TCAAATTCCATCTTTTTTGTAGTGGATATTTTTCACTCTTTTTTTTTTTTTCTTTATTTTTCTCCATGGGA ..x.x..:x.........x.:x..x:.:.....:x:.:.............:...x.....:.::x..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 37827971 NA +3029 chr4 + 190214555 75589852 75589851 75589924 73 TGCACCTGTAGTCCCAGCTCCTTGGGAGACTGAGGTAGAAAGATGGCTTAAGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:......x....::..:.....x:xx:x::.xx:...:.:.....:..:.:x:.....:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -443353 -93787049 +3273 chr4 + 190214555 75590585 75590584 75590657 73 TGCACCTGTAATCCCAGCTGATTGGGAGGCTGAGGCACAAGAATCACTTGAACCTGGGAGGCAAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:......:x...::........x.x::x...x..........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -442620 -93787782 +7402 chr4 + 190214555 75591816 75591815 75592316 501 TACCTGATGTAATGTAATACTGGGGGTGTGCAGGTCAATAGCAGCCAGAGAAGGAATTCGAGATTCTGAAAGAATTTTGCTCTCTTTCTTTGTTAGCCTGGAATTTCGAGCTAGATAGAAATGACCATAAACACAGTGAAAATATTAGACATTTTGTTAGTTTTTAGTTTTTCACATTCTCTACGTGTTCCTCAGTATGTACTTATTATAACAGGTATTTACATACTTAAATATGTAAAGTTAGTATG----AATTTTTATTTTTAAATTCTGTCTAACATACATTTTAAATAATCTAAACAGACTACACAAAGTAAAAGCATTATCAACACACCTATGCCTCCCAGTGCTCTTAGTTCAGGGAGATGATTATAGTTTAGTTCAGGCAAACGGACATCTGTCCTGGAGTATTCTCTTCTTTTCTTACTTGCCCAAAAGAGGTTTTTTTCACTAGAGACCTAATATCATCAACATAGTCAACAAAAAAGAATTAGTTTCAAGGTTA chr4 + 94230402 35186958 35186957 35187337 35186958 35186957 35187337 380 TACCTGCTGTGAGGCCAGACTCGTGTTATGAAGGTCAATAGCAGCAAGGGAGGGGACCCGGGACTCTGAAACTGTTTTATTTTCCTTTTTGAGATACCTGGGATGCCATCCTGCA---AAATG-CAACCAACGCA------------------------------------------------------------------------------------CACAAGGTTAAAGAAGCAAGATCTGACTGCTGCAATGCATACTGCTTCCTGCCACTTAGCATCCAGGTTTAAT------------TTAGAGGACATAAAAGC-------------TCATACCTTCCACTCCTTTCAGTTCAGGGAGATGATT------TAGTTCTGGTAAATGCACATCCGTCTTAGAGAACTCCCGTTTTTTCTTATTTGCCTGAAGGATGTTCTTTTCATTAGAGACCTCGTGTAGACAGAGAAG------AAACAAAGCTATTTTCAGGACTA ......x...:.x.:x.x...x.x.x.:..x..............x..:..:..:.::..:..:.......xx:....::.:..:..:..x:xxx:.....:..x:.:xx..:x.---.....-.x.:x...:..------------------------------------------------------------------------------------:...x:x.....x.x.:..::.:x.xx..----...x:x..:.x:.xxx.x.::::..:...x..xx..x...------------:..x.x:.x:.......-------------::..:...:...x.x..:.:.................------......x..:...:.x.....:...:.:...x.:..:.x.:........:.....::..:..x...:......:.........x:.:.x:x..:x:x..------...x.:.::..x.....:.::.. 115M3D5M1D11M84D29M4I40M12D17M13D37M6D99M6D23M 248/376 66.0% 380/94230402 0.0% 129/376 34.3% 40404858 NA +6182 chr4 + 190214555 75600272 75600271 75600381 110 GTACTAT--ACCTCTCAGCAAATCCATCCATTTGAAAGAAATCATGGTGTAGGAGCTCAGCACAGAAGGGTCTTTTGTCGGGGTCAATATGTAAGCATTTCTGAAAAATTAA chr4 + 94230402 35190855 35190854 35190966 35190855 35190854 35190966 112 GTACCATTCACCTTTCAGCAAATCCATCCTTGTTAAAGAAATCGCTCTGCAAGAGTTCAGCACAGGATGGTCTTTTGTCTGGGTCAATCTGCAAACACTTCTGTTAAACCAA ....:..--....:...............x.x.x.........::xx..:.:...:.........:.x...........x........x..:..:..:.....xx...::.. 7M2I103M 87/110 79.1% 112/94230402 0.0% 2/110 1.8% 40409417 NA +3056 chr4 + 190214555 75602082 75602081 75602210 129 CTGGCTGCAGCCAATACAGTGGCTAAGCAAAAACCCCTTTGACAATATCATACAGATCATGATCCTATGCCCTACATTTTGT----TTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTTGACATGGAGTCT chr4 + 94230402 81178836 81178835 81178961 81178836 81178835 81178961 126 CTGTCTGCTGCAAGTG----AGCCAAGCATAGACATAAATAGGAACAATACACATTTTGTGTTTTCA---CTCAGGTTTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAGGATATAGTTT ...x....x..x.:.:----:..:.....x.:..x:xxx.::x..:.x:.:...xx.::..x.:::.---.::.x:.....:----......x...........................x::x..:x...:. 16M4D47M3D12M4I47M 80/122 65.6% 126/94230402 0.0% 11/122 9.0% -5576754 -88653648 +3202 chr4 + 190214555 75602158 75602157 75602196 39 TTTTGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT chr4 + 94230402 27444622 27444621 27444660 27444622 27444621 27444660 39 TTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT ...x..x................................ 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 48157536 NA +3020 chr4 + 190214555 75602161 75602160 75602197 37 TGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTT chr4 + 94230402 4756113 4756112 4756149 4756113 4756112 4756149 37 TGTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTT .........x......................x.... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 70846048 NA +3056 chr4 + 190214555 75602162 75602161 75602203 42 GTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTTGACAT chr4 + 94230402 77610504 77610503 77610545 77610504 77610503 77610545 42 GTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCAT ............................x..x.....xx... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -2008342 -92222060 +8621 chr4 + 190214555 75603813 75603812 75603962 150 TTACCTTTGCTAAATCTATCACCACTTCAGAGAGCTTAGGATAGCGTCTTTCAAGAGGTTCTCTTTCCTTGATTTCAGGCAACCTTACTCCAGCAAACACAGGATTTTTATTAAAAAGCTCCTGATGCCTTGGAATTAGATTACCTGGAA chr4 + 94230402 35191798 35191797 35191947 35191798 35191797 35191947 150 TTACCTTGGCTAAATCTAGCACTGAAGCAGAGAGCTTAGGATATCGTCTGTCCAGAGATTCAGCCTCTTTCACTTCAGGCAACCTCATGCCAGCAAAGAGGGGATTTTTACAGAATAACTCTTGGTGTCTTGGAATTAAATTACCTGGAA .......x..........x...::xxx................x.....x..x....:...xx::..:..x.:............:.:x........x.x:.........:x:..x.:...:..:..:..........:........... 150M 117/150 78.0% 150/94230402 0.0% 0/150 0.0% 40412015 NA +8287 chr4 + 190214555 75605517 75605516 75605648 132 CTTACCTAAACACATCATAATATGATATAGCTGATCAATATCAGAATCTCCAGGAAATAGGGGTTCCCCCATGAACATTTCAGTTACCAGACAACCAATGGCCCACACATCAACAGCCCTGAAAGAAAAGCA chr4 + 94230402 35192234 35192233 35192365 35192234 35192233 35192365 132 CTCACCCAGGCACTTGGTGATGTGGTAGAGCTGATCGATGTCTGAATCTCCAGGGAACAGAGGCTCTCCTGTGAGCATTTCTGTTACCAGACAGCCAATAGCCCACACATCCACAGCCCTGGAAGACAAACA ..:...:.::...x.x:.:..:..:..x........:..:..x...........:..:..:..:..:..::...:......x...........:.....:...........x.........:....x..:.. 132M 103/132 78.0% 132/94230402 0.0% 0/132 0.0% 40413283 NA +11813 chr4 + 190214555 75607157 75607156 75607375 219 ACTCCTCCCCATTACTGATGTCTTACTTGCCATACTTGACATCACCAACCAATAGTTCTGGAGCTCTGTACCATCGGGTTGCCACATAATCAGTATAAACCTCCCCAGGAGCTGCCAATGTTCGCGCAAATCCAAAATCGCATAGCTTGACAACGCCAGACTGGGAGACTAATATATTCTCTGGCTTTATATCTCTGTGTATGATCT----AGACAAGAAGCA chr4 + 94230402 35193156 35193155 35193378 35193156 35193155 35193378 223 ACCCTTCTGCCTGGCCACTCTCCTACCTGCCATATTTCGTGTCTCCCACCAGCAGCTCTGGAGCTCTGTACCATCGAGTTGCCACATAGTCTGTGTAAGCTTCCCCAGAAGCTGCCAACGTGCGAGCAAAACCGAAGTCACAGAGTTTTACCACTCCTGACTGGGAGACCAGTATGTTCTCTGGCTTAATATCCCGATGTATTATCTGCACAGAGAAAAAGCA ..:.:..:x.x.x:.::x.x..:...:.......:..x:::..x..x....::..:....................:...........:..x..:...:.:.......:.........:..x..x.....x..:..:..:..x..:..x..x..x..x...........:.:...:...........x.....:.x:.....x....----...x..:..... 207M4I12M 166/219 75.8% 223/94230402 0.0% 4/219 1.8% 40414001 NA +12089 chr4 + 190214555 75614247 75614246 75614519 273 ATACTTACATTGTGACTGTGACAAAATCCAATTCCATTAATAATCTGAAACAAATACTTTTGAACTACTTGGTAGTCTAGTCCATTTGGAAAGAGCTCCAAGTCATCAAGAATTGTGTGGTCAACAAATTCAAAGACTAGGTACCATCGTTTTTTTTTCTTACACACTTCCAAGAGATTCACCAAGTTTTCATGCCTAAGTTGCTGTTATTAAAAAATGCAAAATAGCTGTTATTTAAAAATGCAAAATAGTTTAT--ATAAACTAAGATCAAAT chr4 + 94230402 35194125 35194124 35194393 35194125 35194124 35194393 269 ATACTTACGTTCTGGCTGTGACAAAACGCTATTCCTCTCAAAATCTGAAATAAGTATTTCCGAACCCTGCTGTAGTCAAGTCCATTTGGAAATGCCTCAAGATCATCAAGCACCGTGTGATCCACAAATTCAAACACCAGATACCACCGTTTCTTCTTTTTATACACTTCCAGCAGGCTCACAAGATTCTCATGCCTGAGTTGCTGTAACGAAACAG---GAAATA--TTTTGTGAGAGCATG-AAAGCATTTGATGGGTAAACTAAGACCAGAT ........:..x..:...........:x.x.....x:.x.x.........:..:..:..::....:x:x:x......x..............x:x...x.::........x.::.....:..x...........x..:..:.....:.....:..:..:...:.........:x..::....x.::..:........:.........x.:x...x.:---:.....--.x..:.xx:.:x...-...::.x..x..--:..........:..:.. 217M3D6M2D15M1D12M2I17M 197/267 73.8% 269/94230402 0.0% 8/267 3.0% 40420122 NA +5064 chr4 + 190214555 75617022 75617021 75617139 118 ACTTACATCGTGACTGCGACAAAATCCAATTCCATTATTAATAATCTGAAACAAGTACTTTTGAACTAGTTGGTAGTCTAGTCCATTTGGAAAGAGCTCCAAGTCATCAAACCCCATG chr4 + 94230402 35194127 35194126 35194241 35194127 35194126 35194241 115 ACTTACGTTCTGGCTGTGACAAAACGCTATTCC--TCTCAA-AATCTGAAATAAGTATTTCCGAACCCTGCTGTAGTCAAGTCCATTTGGAAATGCCTCAAGATCATCAAGCACCGTG ......:.:x..:...:.......:x.x.....--.x.:..-.........:.....:..::....:xxx:x......x..............x:x...x.::.......:.x..:.. 33M2D6M1D76M 85/115 73.9% 115/94230402 0.0% 3/115 2.6% 40422895 NA +3361 chr4 + 190214555 75622589 75622588 75622660 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGCGGGTAGAAGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x::...........x:.x.xx::.:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -410617 -93819785 +3202 chr4 + 190214555 75629799 75629798 75629867 69 CGTGGTGGTGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......-::.x....:.:...........::........x.xx.xx..x.:...........:.. 10M1D58M 50/68 73.5% 68/94230402 0.0% 1/68 1.5% -403398 -93827004 +3695 chr4 + 190214555 75638434 75638433 75638499 66 GTGGTGCATGCCTGTAATCCGAGCTACTTGGGAGCCTGAGGCATGTGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--....:.:.x.........::..x.....x.x......x...........:.:.. 10M2D54M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% -394767 -93835635 +3585 chr4 + 190214555 75641311 75641310 75641393 83 CGTGGTGGCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::....--......:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -391886 -93838516 +3524 chr4 + 190214555 75648217 75648216 75648290 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGGGAATCATTTGAACCCGGGAGACAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x..:........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -384987 -93845415 +3008 chr4 + 190214555 75648351 75648350 75648384 34 AAAAAACAAACAAACAAAAAAAAAAAACAAAAAA chr4 + 94230402 66953679 66953678 66953712 66953679 66953678 66953712 34 AAAAAACAAACAAACAAAAAAAAAAAGCAAAAAA ..........................:....... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 8694672 NA +3604 chr4 + 190214555 75649882 75649881 75649953 72 GCACCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGAAGACGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:::...........::........x.xx.x...x.:.........:....x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -383324 -93847078 +3294 chr4 + 190214555 75664447 75664446 75664535 89 GCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGATCCCAGGAGGCAGAGTTTGTAGTGGGCCAAGATCATGCC chr4 + 94230402 76033206 76033205 76033288 76033206 76033205 76033288 83 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCC ..:.x......:...........::.:......x.xx.x...x.:.....x.....:..x:xx:.x:.....------..x..x..... 72M6D11M 60/83 72.3% 83/94230402 0.0% 6/83 7.2% -368759 -93861643 +3191 chr4 + 190214555 75667158 75667157 75667231 74 GTGCAAGCGTAGCTCCAGCTACTCGGGAAGCTGAGGTGGGAGGAATGCCTGAGCCCGGGAAGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:....:..........:.::.:......x:xx.x.:.:::.:...:...:.:.:x.:x:.....:.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -366046 -93864356 +3914 chr4 + 190214555 75677431 75677430 75677513 83 CATGGTGGTGCGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x......:.........x.::........x.xx.x...x.............:..x:xx:..:...:. 11M2D70M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% -355766 -93874636 +3684 chr4 + 190214555 75681194 75681193 75681266 73 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:.::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -352011 -93878391 +3019 chr4 + 190214555 75709608 75709607 75709662 55 TCTCAGAAAGAAAGAAAAAGGAAGGAAGGAAGGATTGATTTGTGGTTTCATTTTT chr4 + 94230402 12839286 12839285 12839340 12839286 12839285 12839340 55 TCCAAGAAAGACAAAAAAAGAAAGACAGGAAGGATTGATTTCTCTTTATATTTTT ..:x.......x.:......:...:x...............x.xx..x:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 62870322 NA +3147 chr4 + 190214555 75711190 75711189 75711261 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCTCTTGAACCCAGGAGACAGTGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x:xx.x...x.x...........:..x:xxx..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -322016 -93908386 +3388 chr4 + 190214555 75720656 75720655 75720738 83 CATGGTGGCATGTGCCTCTATTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCCGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x.x..x.:...........:.........x.xx.x...x.:.........:.:..x::x:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -312541 -93917861 +3843 chr4 + 190214555 75721014 75721013 75721086 73 GTGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGAAGAGCTCTTGAACCCAGGAGTTCCAGGATGTA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x......:.:.......::::........x.xx.x::...x...........:..:.:::..x.... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -312190 -93918212 +3424 chr4 + 190214555 75732737 75732736 75732821 85 CATGGTGGCACCTGTGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCAGGGAGTTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG----TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....----..::.x....:.:...........::.:......x.xx.x...x..........x:.:..:.xx:..:..:.. 8M4D73M 57/81 70.4% 81/94230402 0.0% 4/81 4.9% -300460 -93929942 +3623 chr4 + 190214555 75733130 75733129 75733201 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx:...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -300076 -93930326 +3090 chr4 + 190214555 75741577 75741576 75741624 48 ATTTTAAAATTTTTACTTTTTAAACTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 39449330 39449329 39449377 39449330 39449329 39449377 48 ATTGTAAAATCATTACTTTTTAAACTTTGTTTTTTATTCTTTTTATTT ...x......:x................x......x..:.....x... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 36292247 NA +3248 chr4 + 190214555 75772969 75772968 75773040 72 GCGCCTGTAATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.x...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -260237 -93970165 +3422 chr4 + 190214555 75775400 75775399 75775468 69 GTGGTGGTAAACACCTGTAATCCCAGCTACTTGGGAGGCTGAGAAACGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x....:.:...........::........xxx:.x...x...........:.:.. 6M5D58M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% -257801 -93972601 +3076 chr4 + 190214555 75788143 75788142 75788186 44 TCCTATATCTTTATTTATTTATTTATTTATTTTTTTTTTTTTTT chr4 + 94230402 40936486 40936485 40936529 40936486 40936485 40936529 44 TTCTCCATTTTTATTTATTTATTCATTCACTTTTTTTTTTTTTT .:..x:..:..............:...:.:.............. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 34851657 NA +3926 chr4 + 190214555 75790034 75790033 75790175 142 ACTTAAAGTATAATA-AAAAAAAAAACAAAAAAAAAAGATTTTTTTTCTATTGAAAACATATTTTCCTTCTTGACTTAATTTCTCTAAATGTTCTTTTTCTTTCTTCCCCTTAACAGACCATAAATACTGTATCAGAAGTTAT chr4 + 94230402 73754428 73754427 73754570 73754428 73754427 73754570 143 ACCTAAAAAATATTCCAAAAAAAAAAAAAAAAAAAGAATTTATGTTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTTGGCCTCCAAAAGCTAGAAAATACATTATCAGAAATTAT ..:....:x...x.x-..........x........:.:x..x.x..:..x..:x:xx.x.:.x.x:....:.:x....x..:..::xxx.x..:.....:...:.xx..:::..x..x:x:x......xx........:.... 15M1I127M 91/142 64.1% 143/94230402 0.0% 1/142 0.7% 2035606 NA +3273 chr4 + 190214555 75792557 75792556 75792639 83 CATGGTGGCACACACCGGTAGTCCTAGCTACATGGGAGGCTGAGGTGCGAGAATCACCTGAGCCTGGGAGGTCGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...::--.....:.:......x..::........x:x:.x...x...:...:..::.:..x.:x:.....:.. 15M2D66M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -240640 -93989762 +3053 chr4 + 190214555 75802687 75802686 75802769 83 ATTCAGTGTTTTTGATGCTGAGGTTGCTTTCCATTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGT chr4 + 94230402 54568116 54568115 54568198 54568116 54568115 54568198 83 ACTCATTACTTTTGAGGCTTATGTTGCTTATTACTTTCTTTTTTTTTTTTTTTTTGCCTTCCAATTTATTGGTTCAGCACAGT .:...x.::......x...x.x.......x::.:...::.....:....:.....x::..::xx...x..xx..:::x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 21234571 NA +3307 chr4 + 190214555 75805567 75805566 75805649 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACGCAGGAGGCTGAGGCAGGAGAATCTCTTAAACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:........x::::........x.xx.x...x.x...:.......:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -227630 -94002772 +3635 chr4 + 190214555 75819068 75819067 75819141 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.........:...:.:x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -214136 -94016266 +3675 chr4 + 190214555 75827583 75827582 75827659 77 GTGACTCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTAGGAGGATCACTTGAGCTCAAGAGTTTGAGGCTGAAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::x...x......:.:.........::........x:xx.x.:.x.......:.:..::..:..x:.....x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -205618 -94024784 +3336 chr4 + 190214555 75829551 75829550 75829612 62 ATACTACACTTGATCTTAGCCAAAAGGCCAAGAAGCGATAGAGTCTCACTCTGTCACTGGGA chr4 + 94230402 37937484 37937483 37937545 37937484 37937483 37937545 62 ACACTACACTTGATCTTAGCCAAAAGGACGAGAAGCAATGGAATAATAAttaagcactagaa .:.........................x.:......:..:..:.xx:.x.:x:x....:.:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 37892067 NA +3076 chr4 + 190214555 75842688 75842687 75842742 55 TGTACCTTGAATGTGCTTTTTTTTTTTTTCTTTCTTTTTTTGAGATGGAGTCTCG chr4 + 94230402 2771299 2771298 2771353 2771299 2771298 2771353 55 TGTAAATTAGATGTGCTTTTTTTTTTTTTTTTTCTTTCTAGAAAATGGGGTATTG ....xx..::...................:.......:.xx:.:....:..x.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 73071389 NA +3134 chr4 + 190214555 75856847 75856846 75856909 63 TATATATATATATATATATATATATATATATATAT------ATTTTTTTTTTTTTTTTTTTTTTTTTCT chr4 + 94230402 7823264 7823263 7823332 7823264 7823263 7823332 69 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACT ..:...:.........:.:......x.:.:x.x..------...:...x..:..............x.. 35M6I28M 50/63 79.4% 69/94230402 0.0% 6/63 9.5% 68033583 NA +3017 chr4 + 190214555 75856862 75856861 75856900 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 51064236 NA +11064 chr4 + 190214555 75860748 75860747 75860942 195 GGATTTCTCCACAAGGCGGAAGGCCTCCAGGAACTCATTGATATCAATGTGGCCATCTTTGTTGAAATCAATGCTCCGAGCAAGGTCACAGATGCAGTCATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAACTCGTCCAGTGAGATGAACCCTTATCAGAGGGAGGAAATCAC chr4 + 94230402 51446049 51446048 51446240 51446049 51446048 51446240 192 GGACTGTTTGACAAGGCGGAAGGCTTCTAGGAACTCGTTGAAGTCAATGTTTCCATCTTTATTGAAATCAATGCTGCGAACTAAGTCATTGATGCCATCGTCTGTGAGCTCAATGTTCATGTGAGAGCTGAACAGCTTCCAGGTTTGGTGGAACTCCTCAAATGAGATGAGACCTG---TGAGGGAGGAAGGCAC ...:.x:.:x..............:..:........:....x:.......xx........:..............x...:.x.:....:x.....x:..:.....:.xx..:..:.............................:..x:x......x..x.:........:x...x---x..........:x... 176M3D16M 152/192 79.2% 192/94230402 0.0% 3/192 1.6% 24414699 NA +7126 chr4 + 190214555 75864434 75864433 75864573 140 CTTTACCTGAATGATCACTGTCTATGATCCTAAAAATGGTCTCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTGCAAGAAAAAAT-TCATTTTCCTTCTTTGTCATACGTTTAGACTT chr4 + 94230402 51446777 51446776 51446917 51446777 51446776 51446917 141 CCTTACCTGAATGATCTCTGTCTATGATCCTGAATATGGTCTCCAGGTTGGATCTGTTTCGATAGATAACTTCCAGCAAGCTCGACTGGATGTGCTGAAAGACAATATATTGTCATGCTCCTTTTCAATAGCTCTGGGCTT .:..............x..............:..x........:..........x.........x.xx::.........:..:..:..x....x...x....x..x..-.::.:x.x..:....x:x...xx.:.:.:... 108M1I32M 107/140 76.4% 141/94230402 0.0% 1/140 0.7% 24417657 NA +10370 chr4 + 190214555 75866182 75866181 75866365 184 CCGTTACCTCGCGACTCAGTTGTTCCTTGGCCAAGTTCTTCAGCCAAGACTTGTACTCCAGCATGTTGTCTGCTGAGCTGTTCACCAGCTGTGGCCTCAGCATCCGCCATGGCAGTCCTAGGTGCAACACAGACTCCACCGCTGCTGCCCAGTCACTCAAGGTGATTAAACCTACAGGTGAGAG chr4 + 94230402 51447437 51447436 51447620 51447437 51447436 51447620 184 CCCTTACCTCTTGGCTCCTCTGCTCCATGGCCAAATCATCAAGCCAGGACTTGTACTCCAGCATGCCATCTGCCGTGCTGCGCACCAGCTGTGGTCTCAACATCCGCCACGGCAATCCCAGGCGCAAGACTGACTCCACGGCCGTTGCCCAGTTGCTCAGCGTGATCCTTCCTGTAGGGAAAAG ..x.......x:.:...xx:..:...x.......:.:x.:x.....:..................:::.....:.x....:x............:....:.........:....:...:...:....x..x........x..:.:........::....:x.....:xxx...::...x:.:.. 184M 138/184 75.0% 184/94230402 0.0% 0/184 0.0% 24418745 NA +6221 chr4 + 190214555 75867303 75867302 75867450 148 TCATTCTTACCGACTTTATCTGCATCATGCTTCTTAAATTCACTGAGAAGATCTGAAGAATGAGCAAACAGCTTCTCCCTCAGAGCTCTCAGAGCCGACTCCTCCACTCTGCTAATCCTGGGACAGGAGATGAAAAGCGA--CATTTTAA chr4 + 94230402 51448824 51448823 51448973 51448824 51448823 51448973 150 TCAGATTTACCTGTATTGTCTTTATCGTACACCTTGAATGCACTGATGAGGGCCGAGGTGTGAGCAAACAGCTTTTCCCGCAGGGCTCGGAAGGCTGACTCCTCTACTCTGCTGATTCTGAAGCATGCAGAAAAGAGAGAAGCATCTTAA ...xx:.....x::x..:...x:...:.:.x:...:...x......x:..:x.:..:.x:..............:....x...:....xx.::..:........:........:..:...:::..x.x::x:..:..x..--...:.... 140M2I8M 101/148 68.2% 150/94230402 0.0% 2/148 1.4% 24418479 NA +9825 chr4 + 190214555 75872014 75872013 75872205 192 AAAAGTCTTGCCTTTGCCTCATGGTGAGTGTGTGGGTCACCTTGTTAGCTTGATACTGCACAATATGTGGGGTCAGGGCTGGCCCCAGTTTGACATAGGCCCCTCTGTTGCTGCCAACTTCATAGTAGTTGGAGGCAGAAAAGATTGTTAATACCTACATCAAAACAGAAGAGAGACAGGTGTTCACATTCA chr4 + 94230402 51449610 51449609 51449786 51449610 51449609 51449786 177 AAGAGCCTTGCCTTTGGGTCATGGTGAGGGTGTGGGCTGTCTTGTTCGCTTGGTACTGAACAAAATGGGGCACCAGGTCCGGCCCCAGCTTCACGTAGGCTCCCCTGTTGCTGCCAATCTCATAATAGTTTGAGGCTGAAAATATGGTCAGTACCT---------------AAAGAAAGGTATTTACAGTCA ..:..:..........xx..........x.......::::......x.....:.....x....x...x..x::....x.:........:..x..:.....:..:.............::.....:.....x.....x.....x..x..:.:.....---------------.:...x....:..:...x... 156M15D21M 139/177 78.5% 177/94230402 0.0% 15/177 8.5% 24422404 NA +11219 chr4 + 190214555 75873120 75873119 75873316 197 CACCCACCTTGCGGTTGTGACAGAATTCATAGCCTTCAGGTTTGCATTCATGTGAACGGATCAGGAATTGCATGTTGTATTTTTGTAGCAACTGTTGTGTCACATCAGGCCCAAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCACTCCACAGGATATCTACAACCTGA chr4 + 94230402 51450355 51450354 51450551 51450355 51450354 51450551 197 CACCGACCTTCCGGTTGTGACAGAACTCATAGCCGTCTTGCTTGCACTCATGGGAGCGGATGAGGAACTGCAGGTTGTACTTCTCAAGGATCTTCCCCGTCACATCAGGCCCAAAGTAGCAGCCGCCGCCTCGCACCGTATTTTCTCTGCAGCCCTCCTGAGGCATGGGGTCACTCCAGAGAATGTCTAAAATCTGA ....x.....x..............:........x..xx.:.....:.....x..:.....x.....:....x......:..:.xx..x.x..x::x:.................:..:.....x..x.....x.:x..:..xx.::..........:....x......:........x..:..:....x..:.... 197M 153/197 77.7% 197/94230402 0.0% 0/197 0.0% 24422765 NA +3580 chr4 + 190214555 75877196 75877195 75877266 71 ACGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::........:.--....:.:...........::........x.xx.x...x::.........:.:.. 15M2D54M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -156000 -94074402 +3447 chr4 + 190214555 75877340 75877339 75877447 108 AAAAAAAATAAACAATAAAAAAGAGAGAGAGAAAGAAAGAGAGAAAGAAAGAAGAGGAAGAAAAA---GAAAGAAAGAGAGAGAAAGGAAGGAAAGAAGGG-AAGGAAGGAA chr4 + 94230402 75176415 75176414 75176519 75176415 75176414 75176519 105 AGAATAAGTAATCAGTGAACA-------GAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA .:..x..:...x..:.:..x.-------...x.x...:x.......:...:.:.......x....---:.:.:......::.x:...:..xx..x..:..:-.......... 21M7D37M3I33M1I10M 73/101 72.3% 105/94230402 0.0% 11/101 10.9% 700925 NA +3148 chr4 + 190214555 75877389 75877388 75877456 68 AGAAGAGGAAGAAAAAGAAAGAAAGAGAGAGAAAGGAAGGAAAGAAGGGAAGGAAGGAAGGAAGGAAC chr4 + 94230402 7358263 7358262 7358330 7358263 7358262 7358330 68 AGATGGGGAGAAAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGAC ...x.:...::...:....:.:.xxx......:..x.....:.....:..::...::.x...::.:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 68519126 NA +8716 chr4 + 190214555 75882922 75882921 75883207 286 CTACCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACACCCCACCATGAAGAATTAGAACTTTCTCATCTATCAGAGTGGCCAGTGGAAGCCAACAGAAAACATCTTGCAGGGTTCTTAGTATTTCCTTCCCGTGTACCT-GGAAAAAATGATATAAACAAAATGTTATCAAATAATTCACTCAA----CTTATCTGA---ACTGAGAGAAACTTTTGTCTTTAAAGGCA-GCGCACCTTGTATTTATTCATCACTTCCTTGGTGAAGCCATATCTAGA chr4 + 94230402 51453036 51453035 51453322 51453036 51453035 51453322 287 CTACTTTGTTCCTTTGAATTTTCTCAAGCATGTCCAGATCAGTAGTATCAGAGACGCCCCCATGTATAACAAGGACTTTCTGATCAATCAGGGTGGCCAGAGGTAACCAGCAGAAGACATTCTGAATCATCTTCAAGATTTTCTTCCCATGCAACTAGGAGGACAAGGCAGAAAGGAAAAGTTGAAGCATCAGGCCTCCAAAGTCCACATCTCACATGCTGCAGAAGACAT--------GAACACATGCCTACCTTGTATTTCTGCATGACTTCCTTGGTGAAACCATACCTAAA ....:...:....:.xx.....x..x.:x.xx...........x:.:..x..x..x..x.....x.x..:x..:.......x...x.....:........x..x.:...:.....:....::..x.xx:.::.:.:x....:......:..:.x..-...::.x.x.::.x...x:...x...:xx:x..x.xx.x::...----.x:....x.---:...x:::.:..x.--------:..x:..-..x:...........x.x...x..............:.....:...:. 156M1I44M4I9M3I14M8D7M1I48M 190/278 68.3% 287/94230402 0.0% 17/278 6.1% 24429886 NA +9122 chr4 + 190214555 75884490 75884489 75884762 273 AAACTAGTTTTAAAGGCATTTAACAAATAAGAAGTTCTGGAGAAATAACATTTTACAATTACAAC----AAACAAACATCAAATACTCAAGCATGTTTTGACTTGTACCGTAAGTTCACCATATGGTCCTCATGGTTTCCTCTGTTAAGATGGAACTCTTTGGGGTAAACCAGCATGAAGGCAAAAAGAATCATCAGGATCTCTACTGAATCCTTGCCTCGATCCACAAAGTCACCGTTGAACACATATGACCGTTCTGGCGACGGGAGGCCATTCT chr4 + 94230402 51453309 51453308 51453570 51453309 51453308 51453570 262 AAACCATACCTAAAGGAAC--AAGAGAACAGAAGTT------GAGTAAGATTTTGTATTGACACCCTTGACATTGTCATCAGCCCCACAAGGA-------ACCCATACCGTAAGTTGACCATGTGGTCTTCATGGTTCCCACGGTTGAGATGAACCTCTTTTGGATATATCAAGAGGAAGGTAAAGAGGATGATGAGGATCTCGAGGGACTGTTTGCCCCTATCTACAAAGTCCCCATTGAACACATAGGACTTGGAAGGAGAAGGAAGGCCATTCT ....:.xx::......x.:--..x.:.xx.......------:.:...x.....::.x.x...x.----.x.:x:x.....:x:x.x....x.-------..:::...........x.....:.....:........:..x.x...:.....:.x......x..:..x.:..:x.x.....:...:..:..x..x........x.xx..x.x:.....:.x...:........x..:...........x...:xxxxx..x..x..:.......... 19M2D15M6D23M4I24M7D177M 183/258 70.9% 262/94230402 0.0% 19/258 7.4% 24431181 NA +5714 chr4 + 190214555 75886414 75886413 75886529 116 ACGGCACGTTCGTGGGGAACCTGACATTAAACTGTTCGTAGATGACCTGCTTCTGGGTCAGGATTTCGCACTGAGCAGAGCAGCTCCCTCGCTGTGATCTACTGAAAGTCAGCCCT chr4 + 94230402 52529362 52529361 52529477 52529362 52529361 52529477 116 ACCGCGTAATCGTGGGGAATCTAGTACTAAATCGTTTGTATATTATCGGATTCTGAGTCAGTGCTTTACAAATAGCAAAGCAGCTCTCTTACTGTGATCTACTGAGACACAGCCCT ..x..:::x..........:..:::.:....::...:...x..x.:.x.x.....:.....x::..::..xxx....:........:..::..............:.xx....... 116M 82/116 70.7% 116/94230402 0.0% 0/116 0.0% 23357052 NA +4734 chr4 + 190214555 75886798 75886797 75886919 122 AGCTTCTAAATTAAGCTTCAGAGCAAGAAAGCAACTTAATTTGAACATTCATACCTTATAAAATATAAAGATTAAGTCATCCAATTGGCCATGTAAGTCTCCTAACAAAGATAGAAAAAGAA chr4 + 94230402 51453912 51453911 51454015 51453912 51453911 51454015 104 AGTTTGCAAAT---GCTTCTCAGCAAGCAAG---------------GTGCTTACCTTATAAAATATGAGGAACAAGTCATCCAGCTGGCCATGCAAGTCTCCTAACAGGCACAAAAAGACAA ..:..x:....---.....xx......x...---------------:.x.x...............:.:..x:..........::........:.............::x.:.:...:.x.. 11M3D17M15D76M 81/104 77.9% 104/94230402 0.0% 18/104 17.3% 24432886 NA +9217 chr4 + 190214555 75888211 75888210 75888362 152 TACCACACACTGTGATCTCCTCACTGTAACAGGTTGAGACCCGGTTGATGTTTGGCAGCTGTACCAGATGTTTCTTGGTTTCATACAAAAGGTTCAAGACGTAGCGAGCATGGAGCTGCTACTGGGAGGAAGAGGAGG----GAAGGAAGAAAACA chr4 + 94230402 51454412 51454411 51454567 51454412 51454411 51454567 156 TACCACACACAGTGACCTCCTCACTATAGCAGGTGGAGACATGACTGATGTTTGGCAACTGCTTGAGGTGCTTCCTGGTCTCATGTAGAAGGTTTAAGACATAGCGAGCGTGGAGCTGCTACTAGGAGAAAGCGAAGGAATTAAAGCAGGAAATCA ..........x....:.........:..:.....x.....x:.::............:...:x:x..:..:...:....:....::.:......:.....:........:.............:....:...x.:...----:...x.:....x.. 138M4I14M 120/152 78.9% 156/94230402 0.0% 4/152 2.6% 24433799 NA +8709 chr4 + 190214555 75889952 75889951 75890136 185 CTTACTTGTTTCAGTCTGAATGCTTCTACCAGGGCAGTTGCATGGTCAGGCAGGAGTGGGAAGGAGAGGCGTGGCCCCGTGTAACTGTCGGGTACCTCTATGGATTCATAGTCACTGCATTTCTTCATCTCGGAGTCCTGGGCGAATCTGTCCTCA---GTGAATATGCGGGTCAGGAAGTCCCCTAG chr4 + 94230402 51455581 51455580 51455765 51455581 51455580 51455765 185 CTTACTTGTTTTTGTTTGAAAGCTTCCAGCAAGGCAGTCGCATGGTCAGGAAGGAGTGGGAAAGAGAGATGGGGTCCAGTATAGGAGTCTGGCACCTCCAGGGATTCGTAGTCACAGTACTTCTCCAGCTCTGCCTCTT---TGAAGCTTTCTCCACTTATGAACATGCGACTGATAAAATCCCCTGG ...........:x..:....x.....:.x..:......:...........x...........:.....::.x..:..x..:..:xx...x..:.....:.x......:.......x.:.:....:..x...x.xx..:.---:...x..x..::..---:....:.....:x.x.x:..:......:. 139M3D14M3I29M 135/182 74.2% 185/94230402 0.0% 6/182 3.3% 24434371 NA +4171 chr4 + 190214555 75891639 75891638 75891716 78 CATACTCACTGTCGTTGTGGCTGCTGGGGATGAAGTGATCCATGAGATAGCTGAAGAAGTCATGGAGCTGCAGAAGAA chr4 + 94230402 51456885 51456884 51456962 51456885 51456884 51456962 78 CAAACTTACTTTCTTTACTGCTGCTTGGTGTGAAGTTGTCCATGAGGTAACTGAAGAAGTTGTGAAGCTGCAAGAAGA ..x...:...x..x..::x......x..x:......x:........:..:..........::..:.......::.::. 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 24434754 NA +8431 chr4 + 190214555 75891843 75891842 75892012 170 CATTGTACCTTGACTTGGTCTTGCTGCCCAGCATATTCTATAGACTGGAAGATGCTCCAGGTGCAACGCCGCCTCATCTCCAGGCGGGCCACGTAGCGCCGGTACCATCTCTGGATCAGGGCTGCTGCCTTGAAGGCTATGACACCGATGGAGAAGCAAGCCTGTGAGCT chr4 + 94230402 51457863 51457862 51458031 51457863 51457862 51458031 169 CACCTTACCTTGATCTGATCCTGCTCACAGGCATACTCAATGGATTGAAAGATTCTCCAAGTGCACCGTCGGCGCATTTCCAGGCGAGCAACGTAGCGCCGATACCACCTTTGGATCAGAACAGCTGCCTTGAAAGCTAGGGAACAAAACCAGAA-CAACCTGCTGAGCT ..::x........::..:..:....xx.x:.....:..x..:..:..:.....x.....:.....x..:..x.x...:........:..x...........:.....:..:........::.x...........:....x.:x..x:.xxx....-...x.:xx...... 155M1D14M 125/169 74.0% 169/94230402 0.0% 1/169 0.6% 24433980 NA +3633 chr4 + 190214555 75895289 75895288 75895371 83 CATGGTGGCACCCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.x..--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -137908 -94092494 +3387 chr4 + 190214555 75897639 75897638 75897736 98 GTGGTGCACACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGCAGAGGTTGCAG----TGA-GCCA---AGATGTGTAACC chr4 + 94230402 76033201 76033200 76033304 76033201 76033200 76033304 104 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCC .........:--....:.:...........::........x.xx.x...xx:........::.:..x:xx:..:..:..----...-....---........:x.. 10M2D67M4I3M1I4M3I12M 72/96 75.0% 104/94230402 0.0% 10/96 10.4% -135562 -94094840 +3652 chr4 + 190214555 75907607 75907606 75907689 83 CATGGTGGCGGGAACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--x..x....:.:...........::........x.xx.x...x.:...........:..x.xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -125590 -94104812 +3127 chr4 + 190214555 75914921 75914920 75914988 68 TTCTGATCCTAGTCATGTACTTGTCTGGGCTACCGGCGCTCATTACCGTAGTATAAATTGTGAAGCTG chr4 + 94230402 51469135 51469134 51469202 51469135 51469134 51469202 68 TTCTGATCCATGTCTGGTACTTCTCTGGAAATGCAGCACTCATTACTGTAGTATACACTGTGCTACTG .........xx...xx......x.....:xxxx.:..:........:........x.:....xx:... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 24445786 NA +9449 chr4 + 190214555 75920942 75920941 75921127 186 TCTACTTACGCTCCATTCAAAGGATCTAGAGGCCAAATGTCTGCTGGGCCATCTCTGTTCCTCGTGATGACCACCCCCTCCCGGGGGGACGTGCCACCAACAATGTAATAAACATCAGCAATAAGGGGAGTCTTGGCCAACTTGCCAACAGCTGCTTCGAAGTTTTCCGACTCACTCAGGGTCTGA chr4 + 94230402 51472081 51472080 51472266 51472081 51472080 51472266 186 TCTACTTACGCTCCACCTAAAGGATCAAGAGGCCAGAGGTCTGCTGGCCCTCTTCTATTTCTTGTTATGACCATGCCTTCTTTGGGCGATACGCCTCCTACAATATAGTAAACTTCAGCAATGATGGGAATGTCAGCTAGTCTGAGAACAGCTGACTGAAAGTCCTCTGCTCTGCTCAGGGTCTGA ...............:::........x........:.x.........x..x::...:..:..:..x.......:x..:..::x...x..:::...x..x.....:..:.....x........:.x....:.x.::..:.:::..xx........x:.x:....::..:.x::::............ 186M 133/186 71.5% 186/94230402 0.0% 0/186 0.0% 24448861 NA +3471 chr4 + 190214555 75925722 75925721 75925814 93 TAAATATACTCACAGCGCGGATCAGCCAGCTGACGGGAATGTGTCTCCGAAACAGG---GCAGCGATAGCATTCTCCCACCACCAGCCTTTATCTG chr4 + 94230402 51473015 51473014 51473107 51473015 51473014 51473107 93 TAGTTGCACTTACATCTCGGATAAGCCAGCTGACGGG---GTAATTTCGATTCAGAAATGCAGCTATTGCATTCTCCCACCAGCTACCACCCTCTG ..:x.::...:...x.x.....x..............---..:x:.:...xx...:---.....x..x..............x.x:..x::x.... 37M3D16M3I37M 66/90 73.3% 93/94230402 0.0% 6/90 6.7% 24452707 NA +3135 chr4 + 190214555 75926421 75926420 75926503 83 CATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x....:.:...........::........xxxx.x...x::........::.:..x:xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -106776 -94123626 +8171 chr4 + 190214555 75931200 75931199 75931342 143 TTTGTTTTGATTACCTCGTTCATCACCAGAAACTGTAAACTTGTGTGGGCTCTGGCCAGTCCATAATCCTACATAGCCAATAAAAGTAGTTCCTGTGAATGCAATCTGAAATCAAGAGATAACATGGATCATTTCACCATTCC chr4 + 94230402 51474908 51474907 51475047 51474908 51474907 51475047 140 TTTTTTTTTTTTACCTCGTTCATCACCAGAGATTGTGAACTTGTGAGGACTTTGTCCAGTCCATAAACCTACGTAGCCAAGAAACGTAGTGCCTCGATATGCTATCTGAAACCAGAAG---ACATGGAGTATTTCAGCATTCC ...x....xx....................:.:...:........x..:..:..x...........x.....:.......x...x.....x...xx:x....x........:..::..---.......x:......x...... 118M3D22M 114/140 81.4% 140/94230402 0.0% 3/140 2.1% 24456292 NA +8166 chr4 + 190214555 75936097 75936096 75936252 156 TACGGATTATACCTGCCCATTCTTTAAGAATTGCACATCCACTGTCAGCTTGCGTAAGACATTCCCAAAAGGATAATCCAAATTCCGACCATGGTAAATGTGGCCTCTGGAGTCTTGAGCCACAATACTGGTGCAGAACCTGAGAAAAGGGAAAAG chr4 + 94230402 51475786 51475785 51475941 51475786 51475785 51475941 156 TACAGTTTATACCTGCCCGCTTTTTATGAACTGCACATCGATGGTAATCTTGCTTAATATATCTACAAAATCATAATCCAGGTTCCGTCCATGGTAAATGTTTCCTTTGTCATCCTGAGCGATAATACTCGTGCAAAACCTGAAAGAACAAAAAAG ...:.x............::.:....x...:........x.:x..x.x.....x...x.:..::x.....xx........::.....x.............xx...:..xx:..:.....x.:......x.....:.......:.:..x::..... 156M 117/156 75.0% 156/94230402 0.0% 0/156 0.0% 24460311 NA +7543 chr4 + 190214555 75940733 75940732 75941042 310 CCCCAGCTCACCCGATGACTTGCGCCATCGCGGCGCGCACCAAGTCCAAGTCGTAGTGCCGCAGCACGGGCAGCCAGCGCAGCTCGG--GGACCGAGTCCAGGCTCACGTTGAAGCGCGGC---GCTGCTGGGGGCGAGGCGGCTG------ACAGCCCGGCCCCGGCCAGCAGCAGCAGCAGCAGGGACGGAAGCCCCGGGCGCGCCTCCCGGTCCGCGGT----CCGCATGGCTCGGGCTCCAGCGGCCGCAACTTGGAGACCTGCAGCCGCTGTCGGAGCCCGGGTAAGCCGTGGAGGAGGAGGAGCTGGGGCTGGGCTGCG chr4 + 94230402 51477045 51477044 51477357 51477045 51477044 51477357 313 cccgcACTCACTCGATGACCCGGGCGACGGCAGCGCGCAGGAAGGCGGGATCGAAGTGCCGCAGCACCGGCAGCCACCGCTCCTCGGCCGGGCT--GTCCAGGCTCACGTTACACAGCAgcggggccgccgcgggccgggcagccgccccgcACAGC---GCCGCCGCCAGCAGCAGCCCCCGCAGCG--GGCAGCCCCGCAC-CGCTCCCCG--CCGCATCGCCGCCGGAGGGCACAGCCGCCCG-AGCCGGGACCCGAGCCACAGCGGCCGCC-TCACGCCCCTGAGGGGCGGCTCAGGGGGAAGGGCCAGGAGAAGGCGGCG ...xx:.....:.......::.x..x.:x..:.......xx...x.x:::...x.............x........x...xx.....--..:.:--...............:x.xx..:..---..:..:.x....x:...:..:.------.....---...x.x............xx.x....x.--..x.......x:.-...::....--....:x:----...x.x...x.:.x.x..x.-:....x:..::.::xxx.x..:.....:-..:x:x...x.:x::..x.:xx...:...:.:..::..:xx:...x... 87M2I5M2D25M3I22M6I5M3D28M2D13M1D9M2D7M4I20M1D28M1D49M 204/298 68.5% 313/94230402 0.0% 27/298 9.1% 24463688 NA +3135 chr4 + 190214555 75942287 75942286 75942378 92 AGAGCAAAACTTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAATGCATAGTAGAAACTAAACACA chr4 + 94230402 41404434 41404433 41404522 41404434 41404433 41404522 89 AAAGCTAAAGCTTGTCATAAACAAAGAAAAAAATAAAAGGAACAAGAAGAAAGGTAGAAAAAGCACTGAG---GTAAGAGGAGATAAGCATA .:...x...x:.....x:...x...:.......x....::..x..:..:...::x.:.....:x...:.:---:..:x..:.:x...:..:. 70M3D19M 59/89 66.3% 89/94230402 0.0% 3/89 3.4% 34537853 NA +3322 chr4 + 190214555 75947783 75947782 75947854 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x::......:....:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -85423 -94144979 +3332 chr4 + 190214555 75949535 75949534 75949617 83 CGTGGTGGCGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--.:..:.:...........::........x.xx.x...x.:........::.:..x:xx:..:...:. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -83662 -94146740 +3057 chr4 + 190214555 75949677 75949676 75949724 48 AAAAAAAAAAAAACAAATAAATAAATAAAAAAGAAAATGCTTTCTGAG chr4 + 94230402 84810350 84810349 84810397 84810350 84810349 84810397 48 AAAAAAAAAAAACCAAACAAACAAATAAAAAAGGAAAAGCTGTTCAAG ............x....:...:...........:...x...x.:::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -8860673 -85369729 +11054 chr4 + 190214555 75955971 75955970 75956139 169 TCACCTGTTTTTCTCGGAAGGAACGCTTATTTTTTGACCGGACATTCTGGCTATACCGCATCATCATAAAGTTCTTCTGTTTTTTCTTCTCTTTATTTGTCGAACTGGAAAATGGATTTGTTTTGGTTTTCTTCCTCACAAATTCTTTTCGGTCTGTCTTTCCAGCCTA chr4 + 94230402 51480450 51480449 51480618 51480450 51480449 51480618 169 TTACCTGTTTTTCCCTGAAAGAACGCTTATTTTTGGTCCGGACATTATGGCTGTATCTCATCATCATAAAGTTCTTCTGCTTTTTCTTTTCTTTGTTGGTTGAGCTGGCAAAGGGATTCAATCTTTTTTTCTTTTTCACAAATTCTTTTCTATCGGTTTTTCCAGCCTA .:...........:.x...:..............x.x.........x.....:..:.x.....................:........:.....:..x..:..:....x...x.....::x.:.xx.......::...............x:..x..:........... 169M 139/169 82.2% 169/94230402 0.0% 0/169 0.0% 24475521 NA +6148 chr4 + 190214555 75957292 75957291 75957411 120 GTTTAAAAAACTAGGAATGATATGCTCA-----CTCACCATTGCAGTTGCTAGTCTTGTCTCTTTGTCAGACTTTGGCTTTTTATGAAGGCGTTCAATGTCCCGAAGAGAAAGTAATTCACCCCT chr4 + 94230402 51480952 51480951 51481074 51480952 51480951 51481074 123 GTCTAAAAGA--GGATATGAAATAGCCAAGTTCCTCACCATTGCAGTTGCCAGTCTCGTCTCCTTGTCCGACTTTGGCTTCTTATGGAGATGTTCGATATCTCTGAGTGAAAGCAACTCTCCTCT ..:.....:.--:.:x....x..:x:..-----.................:.....:.....:.....x...........:.....:..::....:..:..:.x:..x.....:..:..x..:.. 10M2D16M5I92M 91/118 77.1% 123/94230402 0.0% 7/118 5.9% 24476340 NA +8841 chr4 + 190214555 75957466 75957465 75957711 246 TTTCATTACCA---CATGAGCTGACTGAAGTACTAAAGTGGATGTGCCATTTTACCTGGGCTCTTCATCACTGTCTATTTCAATGTATTTCCTCTTCTGGGATTTCCCGGGGGCAGCATCAAGTTCTTTTCTCATTTGGGCCATGCGGATTTTCTGGAAGTCTTCCTGAGTTAAAACTCGGCTAGTGCTGATGGCTGCAGCTTTGGCCTTCCGCTCCTCCATGGGCATGCTGTTCAGCTTCTTGGACTT chr4 + 94230402 51481508 51481507 51481756 51481508 51481507 51481756 249 TTACATCACCAGCCTGTGGGTCAAAGAAAGCACTCGTCAGCATTTCATATCCTACCTGCTCTCCTCTTCATCATCTATTTCAATATTTTTCCTCTTTGCAGCTTTGCCCGGTGCAGAATTGATTTCTCTGGAGAGCTGGGCAAGACGTATTCTGTGGAAATCTTCCTGAGTCAGCAGCCTACTTGTACTGACTGCTGCAGCTTTAGCTTTTCGTTCCTCTACGGGCATGCTTTTGATCTTCTCTGCCTT ..x...:....---::..:.:::.xx:...:...x:xxx.x..x.xx:..::......xx...:..x...:::...........:.x.........:xx:.x...x..x..x....x..::.x....:.xxxx.x:.....x.x:..x...:.x.....:...........:.:x.x:.x:..x..:....:x...........:..:..:..:.....:.:.........x..x.x.....:x.x... 11M3I235M 164/246 66.7% 249/94230402 0.0% 3/246 1.2% 24475958 NA +6878 chr4 + 190214555 75957841 75957840 75957955 115 ACTTACGATTTCTTGCTGTTCTTCATCGGAAGAGTGTTGCACATCAATCCATTCACCA---TCAGCATCCTCCTCCTCACTGAGACTGGTACTTTCCCATCCATCTGCGTGAAAAAAG chr4 + 94230402 51482200 51482199 51482317 51482200 51482199 51482317 118 ACTCACCACTTCTTGCTGCTCCTCATCCGAAGAGTGGTGCACATCAATCCACTCTCCATCTTCACCGTCATCCTCCTCACTCATACTAGCACTTTCCCATCCATCTGCTCAAGGGAAG ...:..x.:.........:..:.....x........x..............:..x...---...x.:..x...........x.x...:.:..................x::.:::... 58M3I57M 93/115 80.9% 118/94230402 0.0% 3/115 2.6% 24475641 NA +7871 chr4 + 190214555 75960035 75960034 75960207 173 TGCCCAAAATAAGGGTGA--AATAAAAATCAACCTTCATCAT------TTTCAGCATTCTCTTCTTTCTCAACTTCCAGAACTTCTGCTCCTGGAATGTAATCTTTAGCATCTAATTCTCCATATTCTTGTACTCTTGCTTCTATGGAGGCCTCTGTAGGCTTACCCTAAAGGAAAAGAAA chr4 + 94230402 51483278 51483277 51483458 51483278 51483277 51483458 181 TGCACAAAATTGAAGTAATAAAGAAAGGCTTACCTTCTTCTTGGTTTCCTCCTTCTTTCTCTTGATCCTCAACCTCCAGTACTTCTGCTCCTGGAATATAGTCCTTGGCATCCAGTTCTCCATATTCATGAATCCTGGCTTCCACCGAGGCCTCAGTAGGTTTACCCTGTAAGTAAACAAA ...x......x:::..:.--..x...::::x......x..x.------:.:.xx.x.......xx.:......:.....x.................:..:..:..:.....:.:............x..x.::..x.....:.:x........x.....:.......:x.:.x...x... 18M2I22M6I133M 128/173 74.0% 181/94230402 0.0% 8/173 4.6% 24476757 NA +5817 chr4 + 190214555 75961023 75961022 75961108 86 CCTACCCGGAATTTCTTCTGCAGCATCTGAGGATTCAGTGTTCGGAAGAGGTGAATCAAAGTTCTAGCAGACATCATTACATCTGT chr4 + 94230402 51483819 51483818 51483904 51483819 51483818 51483904 86 CTTACCCGGTATTTCTTCTGCAGCATCTCTGGATTCAGAGAGCGGAAAAGGTGTATCAGAGTTCTTGCAGACATCATCACATCTAT .:.......x..................xx........x.xx.....:.....x....:......x...........:......:. 86M 73/86 84.9% 86/94230402 0.0% 0/86 0.0% 24477204 NA +6394 chr4 + 190214555 75961206 75961205 75961371 166 CTTACTCTTATCCTTGTGTGTTTTATACTGAGCCAGGTCTTGGAGAAGTTCTTCAGTCATGGCCAGAGGACATCGAGCTGTTATCTCCTTTATAGCATTGATTCTAGAAAAAGAAAAACAAAGTTTAAAAGAGCCCGAATAGCAATTTTTTCATGATTCAACACAG chr4 + 94230402 51484297 51484296 51484438 51484297 51484296 51484438 142 CTCACTTTTATTTTTGTGAGTCTTGTAGTGAGCAAGGTCATGGAGCAGATCTTCAGTCATTGCCAATGGACATCTTGCAGTGATTTCTTTTATTGCATTGATTCTAAAAA-----------------------TTCAAATTGAAATATTTTCCTGAAT-AACACAG ..:...:....::.....x..:..:..x.....x.....x.....x..x...........x....:x.......xx..x..x..:..:.....x............:...-----------------------::.:...x.x...x.....x...x.-....... 110M23D25M1D7M 111/142 78.2% 142/94230402 0.0% 24/142 16.9% 24476909 NA +5564 chr4 + 190214555 75964115 75964114 75964233 119 TCCAACCAGATTCT--ACATACCCTACTGTCATGACTTCTCCAGAGTTCTTGTCGGTAACAAAATTGTTTGCCACAGTCATAAGCAATGATTGAATAATCTGAATTGGAAACAAAAAAGAG chr4 + 94230402 51485081 51485080 51485196 51485081 51485080 51485196 116 TTTAATGAGGTTCTGTACCCACCCTACAGTCATGACCTCCCCAGAATTCTTGTCAGTGACAAAGTTGTTGGCAATGGTCATCAAAACCGATTGGATAATCTGA-----AAATTAAAAAAAG .::..:x..:....--..x:.......x........:..:.....:........:..:.....:.....x..x.::.....x.:x.x:.....:.........-----...:x.....:.. 14M2I87M5D13M 87/114 76.3% 116/94230402 0.0% 7/114 6.1% 24479034 NA +4695 chr4 + 190214555 75965738 75965737 75965847 110 CCAGAAGTCAGGTTACAGGTTCTCACCTCTGGGGGTACTAGGTGATGAGATGCTTGTGCAGCAAACAGAAGGATCTTGGTTACTTCTGAAAACATAAGAGAACAGAAAGG chr4 + 94230402 51485539 51485538 51485644 51485539 51485538 51485644 106 CCAGAAGTAGG--TGCAG-TACTGACCTCAGGTGGTACCAGCTGGTGCGAAGCATGTGCAGCAAACAGAAGAATCTTTGTCACTTCTGAGAGAA-AAGAGAAAAAGGGGG ........x:.--.:...-.x..x.....x..x.....:..x..:..x..x..x.................:.....x..:........:.:x.-.......x.::::.. 11M2D5M1D75M1D15M 82/106 77.4% 106/94230402 0.0% 4/106 3.8% 24480199 NA +4995 chr4 + 190214555 75967264 75967263 75967346 83 AGTGGCAGCTTACCTCTTTGGTGGGGCTGCAGAAACCTTTGCAAAAAGGGATAGAAATTGAAGAGGAAAAGCTGTGGAGAGAA chr4 + 94230402 51486174 51486173 51486256 51486174 51486173 51486256 83 AGTAGCTACTTACCTCTCTGATGGGGCTGCAGGAATCTCTGAATGAAGGGGTAGAAATTAAAAAGAAAAAGCTGCAAGGACAA ...:..x:.........:..:...........:..:..:..x.x:.....:........:..:..:........::::..x.. 83M 63/83 75.9% 83/94230402 0.0% 0/83 0.0% 24481090 NA +3333 chr4 + 190214555 75968902 75968901 75968973 72 TGCGCCTGT-GTCCCAGCTACTTGGGAGGCTGAGGCAGGAGACTCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x...-..:...........::........x.xx.x..xx.............:..x.xx:..:..:.. 9M1I63M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% -64303 -94166099 +7435 chr4 + 190214555 75969294 75969293 75969403 110 ACCTCATGAATTCCCACCAATCTGGAGATAAGGTTCATGAGCATCATCTTCACTTCAAACCTCTCCTTACAGCACTCAAGCTGCTTTAGTAGTTTTTCCGCAAAATCTGG chr4 + 94230402 51487069 51487068 51487178 51487069 51487068 51487178 110 ACCTCATGTATTCCAACTAGCCTAGATATTAGGTCCATGAGCATCATCTTCACTTCAAATCGTTCCTTACAGTTCTCCAGCTGCTTCAGCAGTTTCTCCGCAAAATCTAG ........x.....x..:.::..:..x..x....:........................:.x:.........:x...x........:..:.....:............:. 110M 91/110 82.7% 110/94230402 0.0% 0/110 0.0% 24482225 NA +5888 chr4 + 190214555 75970243 75970242 75970403 161 CAAAGGCAGGAAATAAAATAGGCAGAGATAAGGCCAACAAGGAACTCGGACGTCATAATA-ACGTACCTTGGGGATCATGAATCAAGTGAATGGCTGAAAAGTTAAACACCTCTGGTTTTTTCTTCTTTTTTTGTTTCTG-------AAAGGGAGAGGAAAAACATTTT chr4 + 94230402 51488081 51488080 51488242 51488081 51488080 51488242 162 CAAAGTTAGTAAAAAAAATA--CAGA-ATAAGTT----AGAAAATACAGAAGGCAATATGTGCTTACCCTGGGGATCATGAATCAAGTGAATAGCAGAAAAGTTGAATACCTCTGGCTTGCTTTTCTTCTTGTGTTTCTGCATGACAAAAAGTGTAAACAAGACATTTT .....x:..x...x......--....-.....x:----.:::..:x.:..x.x..xx..:-:.x....:.......................:..x........:..:........:..x:.:.....:..x........-------...:.x:x.::x..:....... 20M2D4M1D7M4D22M1I79M7I22M 116/154 75.3% 162/94230402 0.0% 15/154 9.7% 24482162 NA +6340 chr4 + 190214555 75971346 75971345 75971470 125 ACAAGTCCCACCTTGAGCACTTTCATTGCCTTTTCCAACTTTTTCTTGTTTTTGGAACTTTTCTTCCCTGTAGCATATTGTACTAGCAGGTCTCTTGCTGTTGGTCCATCATCCTAAAGAAGAAA chr4 + 94230402 51488660 51488659 51488784 51488660 51488659 51488784 125 ACACTCCTCACCTTGAGAACCTTCATTGCCTTTTCCAGTTTCTTCTTGCGCTTGCTGGTTTTCTTGCTAGTCGCATATCGCACCATCAGATCTCTGGCTGTGGGGCCATCATCCTTCACAAGGAA ...xx:.:.........x..:................::..:......:x:...xx:x.......x.:x..x......:.:..:.x...:.....x.....x..x..........xx.x...:.. 125M 93/125 74.4% 125/94230402 0.0% 0/125 0.0% 24482686 NA +5374 chr4 + 190214555 75973311 75973310 75973396 86 ACTAACCTCAGATTCGGAGTCACTGTCCTGTTTTTCATCTTCATCTTTCCCAAGAAAGAATGTCAAAGCGGCAACTAATATCTAAA chr4 + 94230402 51489556 51489555 51489641 51489556 51489555 51489641 86 ACCCACCTCAGAATCTGAGTCACTCTCTTGATTCTCATCCTCATCCTTCCCAAGGAAGAACTTCAAACCAGCAACTAATACCTGAA ..:x........x..x........x..:..x..:.....:.....:........:.....:x.....x.:..........:..:.. 86M 69/86 80.2% 86/94230402 0.0% 0/86 0.0% 24483755 NA +4677 chr4 + 190214555 75974049 75974048 75974147 99 CTTACACACAGCCCTA-------TAGGTGCTCACCTTGGTGACCTTAGAGAAACATGCAGTTGTGATAACATTGACAGTTTTTGCATCATTCCTGGGGGAAGACAA chr4 + 94230402 51490226 51490225 51490331 51490226 51490225 51490331 106 CTCACCCACAGTTTCAAATCATTTCAGTTCTCACCTTTGTCACTTTGGAAAAGCAGGCAGTTGTGATGACATTTACTGTTTTGGCATCATTCCTTGAATAAAACAA ..:..x.....::::.-------.x:..x........x..x..:..:..:..:..x...........:.....x..x.....x...........x.::x..:.... 16M7I83M 74/99 74.7% 106/94230402 0.0% 7/99 7.1% 24483823 NA +3616 chr4 + 190214555 75974579 75974578 75974651 73 TGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCACGAGAACTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.............::........x.x:.x...x::...........:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -58626 -94171776 +12183 chr4 + 190214555 75975740 75975739 75976019 280 CTACCAGATGTTCCTTCTGTAGAGTTCAATCATTACATCTAAAGACATCTTGGCTGCGGTTGCATTGCTATCTCTTAACATGGTGTACATGAAATTTTGCAATACCTGCAGAAAAGGAGGAGAAAGAAGACTTAATGCA-----CTGATGGTACAATGCTGCAA---ACAT--GGAAGACAGAAGAGTACTTACTACATTCACTTTATTGTTCTTGTGTTTTGCATTTATATTCTTGATATCAGTCACAATATGTGTGTATAAAGTCTGAGGAAAAGA-AACAAAAATATA chr4 + 94230402 51491049 51491048 51491333 51491049 51491048 51491333 285 CTACCAAATATTCCTTCTGTAAAGTTCAATCATCACATCCAGAGAGATCTTGGCAGCAGTTGGATTGCTGTCTCTCAACATAGTATACATGAAGTTCTGCAGCGTCTA-AGAAAACCGTTTGGAAGA--ATTTATTACAAATCTTTCTTAATAAAAAGTAGTAATGTGCATCAGAAAGATACAA---TACTTACTGTATTTATTCTATTGTTCTTGTGCTTAGCATTTACATTCTTGATGTCTGTCACAATGTGAGTATACAGAGTCTGTAAAAGAGAGAGCAAAGAAATA ......:..:...........:...........:.....:.:...x........x..:....x......:.....:.....:..:........:..:....::::..:-......xx:xxx.:....--.:...x.:..-----:.xx.::..x..x.:x.:..---:...--.:....:.x..---........::...:.:.:.............:..x.......:.........:..x........:..x..:..:.:......x::..:...-.:....:.x... 108M1D18M2D10M5I20M3I4M2I11M3D91M1I12M 207/274 75.5% 285/94230402 0.0% 17/274 6.2% 24484691 NA +6911 chr4 + 190214555 75977636 75977635 75977772 137 TGCCCTTTACCTTTCGCAGAAGTTTATCATGGCAACGAAAAAGTTCAAAGAAGAGTTCTAGCAGGCTTGATGGATTGATGAGATTCTTATTTCTCAGCAAGATCAAAGCTTTGCAAAATGTCTCGGGAAGGAAAAAA chr4 + 94230402 51492057 51492056 51492193 51492057 51492056 51492193 137 TGCAGCTTACTTTTCGTAGGAGCTTATCGTGACATCTCAGCAGCTGAAAGAAGAGCTCCAGCAAACTCGTTGGATTGATCAGATTCTTGTTTCTTAACAACATCAAAGCCTTACAGAAGGTCTGGATGAGAAACAGA ...xx:....:.....:..:..:.....:..:..x.xx.:x..:.x.........:..:....::..:.x.........x........:.....:.:...x........:..:..:..x....x.:x:..:..x.:. 137M 99/137 72.3% 137/94230402 0.0% 0/137 0.0% 24485579 NA +3273 chr4 + 190214555 75978842 75978841 75978921 80 GTGGCACACACCTTGTGGTCCTAGCTACTTGGCACGCTGAGGTGGGAGGACTGCTTGAGCCCAGAAGCTTGAGGCTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG---TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::...:---...:..:.:.........:x.x......x:xx.x.:.x::.....:...........x:.....::. 10M3D67M 54/77 70.1% 77/94230402 0.0% 3/77 3.9% -54359 -94176043 +4924 chr4 + 190214555 75981364 75981363 75981490 127 GGTCCTACCATTCGCAGATCTGGATCCAATACGGTATGATTGCAGGAGAGAAGATCTTTCACCTCTTGAGGAAAATTACTTAGGTACTCTGGGTAGCAGTGACTAATCTGTAACAAAGCAAAGGCTC chr4 + 94230402 51492302 51492301 51492426 51492302 51492301 51492426 125 GGCCTTACCATTCGAAGGTCGGCATCCAGCACCGTGTGGTGGTACGAGAGCAGCTCCTTCAGCTGCTGGGGGAAGTTGGCCATCTGTTCTGGGTAGCAGTGGGCAACCTG-GGCAAAG-ACAGGCTC ..:.:.........x..:..x.x.....::..x..:..:.x.:.x.....x..x..:....x..x:..:..:..:..:x::.xx.::..............:x:..:...-::.....-.x...... 110M1D7M1D8M 87/125 69.6% 125/94230402 0.0% 2/125 1.6% 24489062 NA +5644 chr4 + 190214555 75990732 75990731 75990867 136 CTGCCGCGCCGCACTCCCACCTCCTCGATGTAGGCCGGCGGGTCTCGCTTGATTAGATTCTGTAACTGCGGCAGGTTGCTGGGAAGCTTGTTGTTGTTTCTGTTGGACATTTTGGCTGC-----AGACAGACTTCGCGGCG chr4 + 94230402 51492801 51492800 51492940 51492801 51492800 51492940 140 CCGCCGC-TCGCTCTCTTACCTCCTCGGTGTAGGACGTGGGGTCACGCTTGATGAGGTTCTGCAGCTGAGGCAGGTTGCTGGGCAGCTTGTTCCCCTGGCGGCCCGACATAGCGCCGGCTCCCAGGACAGACAACCCGACG .:.....-:...x...::.........:......x..xx.....x........x..:.....:.:...x..............x........x::x.xx.x.::x.....xx:.x.x..-----:.......xx.x..:.. 7M1D111M5I17M 99/135 73.3% 140/94230402 0.0% 6/135 4.4% 24497931 NA +3446 chr4 + 190214555 75993889 75993888 75993962 74 GCGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAGTCGGTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........::::........x.xx.x..:x.:x..........:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -39315 -94191087 +3097 chr4 + 190214555 75996055 75996054 75996109 55 ATTTAATTTTTTATTGCATTTTCTTTCTTCTTTCTTTCTTTCTTTTTTTAGACGG chr4 + 94230402 34810904 34810903 34810958 34810904 34810903 34810958 55 ATTTTTCTCTTTCGTGCATATACTTTCTTCTCTCTCTCTTTTTTTTTTTAGATGG ....xx:.:...xx.....x.x.........:...:.....:..........:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 41185151 NA +3134 chr4 + 190214555 76010355 76010354 76010408 54 TTTCTCCTTCTCCTTCCCCTCCCCTCTTCTTTTCTTTTCTTTTCTTTCTTTTTG chr4 + 94230402 59557954 59557953 59558005 59557954 59557953 59558005 52 TTTCTCATTTCC--TCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTG ......x..::.--.........:.:..:..........:x..:.......... 12M2D40M 43/52 82.7% 52/94230402 0.0% 2/52 3.8% 16452401 NA +3538 chr4 + 190214555 76020678 76020677 76020796 119 GGACATGTCTTAGAGAAATTTG----GCCAT---AGGGCTGGATGTGGTGGCTTGCACCTGTAATCCCAGCTTCTCTGGAGGCTGAGGTCAGAGGATTACTTGAGCCCAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033154 76033153 76033277 76033154 76033153 76033277 124 GGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x..x:..:.::..:.x..----.:...---...::x:x.::::....--.....x....:.:......x..:x::........x:.x.x.:.x:......:.....:..:.:x:.....:.. 22M4I5M3I17M2D73M 77/117 65.8% 124/94230402 0.0% 9/117 7.7% -12476 -94217926 +3785 chr4 + 190214555 76040186 76040185 76040254 69 ATGGTGGCGCATGCCTGTAATTCCAGCTACTTGCAAGGTTGAGGCAGGAGAATCGCTTGAACCCAGAAG chr4 + 94230402 76033198 76033197 76033264 76033198 76033197 76033264 67 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::....:...:.--....:.............x....:....x.xx.x...x.:.............. 13M2D54M 54/67 80.6% 67/94230402 0.0% 2/67 3.0% 6988 NA +3020 chr4 + 190214555 76051873 76051872 76051926 54 GTTTATGTTGTATCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 64957185 64957184 64957238 64957185 64957184 64957238 54 GTTTACACTGCATCTTTCTCTCTCTCTCTTTTTTTTGTTGTTCTTATCAAAATA .....:::..:....:...........:........x..x..:..x.::.:.:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 11094688 NA +4462 chr4 + 190214555 76079897 76079896 76079951 55 CTTTCACTCTCTCTCTCTCTCTCACACACACACACAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 75248049 75248048 75248103 75248049 75248048 75248103 55 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagag ...:.x..............................x.x................ 55M 51/55 92.7% 55/94230402 0.0% 0/55 0.0% 831848 NA +3522 chr4 + 190214555 76099171 76099170 76099244 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGTCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x.:.x.......::.::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 65967 NA +3225 chr4 + 190214555 76125161 76125160 76125220 60 TGCACCTGTAATCCCAGCTACTTGGAAGGCTGATGCAGGAGAATCACTTAAACCTGGGGG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:...........:........xx.xx.x...x.....:....::.::. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 91956 NA +3134 chr4 + 190214555 76140234 76140233 76140314 81 TGGTGGAGGGAAGTTGAAGGAATTGCAATAAGGGATTTTATTTTCTCTTTGGTTTTTTTTTTTTTTTTTTGAGACAGAGTC chr4 + 94230402 76347864 76347863 76347944 76347864 76347863 76347944 81 TGTTGGGAGAAAGTATATGGAATTAGAACAGTGGATGTGTGTTGTTTTTTGGTTTTGGTTTTTCTTTTTTGGAAAGGAGTC ..x...::.:....xx.x......:x..:.:x....x.xxx..x:.:.........xx.....:.......::.x:..... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -207630 -94022772 +3064 chr4 + 190214555 76143473 76143472 76143546 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGTATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx:x.x.x.:........::.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 110269 NA +3211 chr4 + 190214555 76150279 76150278 76150343 65 CGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGATTTAGCACATTGTCTAATGGCTAAGTAC chr4 + 94230402 14824960 14824959 14825024 14824960 14824959 14825024 65 CACAGCCCAGAGAAGCCAAAAGGTTGGACACCTGTGATGTAAAACATTCCATGGTGCCTACTTAC .:::......:...........:.........:x....x..:x.....x:x.::..x...xx... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 61325319 NA +3716 chr4 + 190214555 76153947 76153946 76154029 83 CGTAGTGGCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....::.:..--......:...........::........x.xx.x...x.:.......:.:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 120750 NA +3370 chr4 + 190214555 76159593 76159592 76159664 72 GCACCTGTAGTCCCAGCTACTTGGGTGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::x.......x.xx.x...x::.........:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 126387 NA +3687 chr4 + 190214555 76164661 76164660 76164743 83 CATGGTGGCACACACCTGTAGTTCCAGCTACTTGGAAGGCAGAGGTGGGAGGATCACTTGAGCCCGGGAAGTCGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--..................:.....x...x:xx.x.:.x.......:...:.:.:x.:x:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 131464 NA +3049 chr4 + 190214555 76167647 76167646 76167706 60 ATTTCCTTTCCTTTCCCTCCCTCCCTCCCCCCCCCCGCTTTTTTTTTTTTTCCTGAGACA chr4 + 94230402 22511681 22511680 22511738 22511681 22511680 22511738 58 ATATGCTTTCTTTTATTTCTCTCCCCCCCCCCCCCCCC--CTTTTTTTTTTCCTAAAATA ..x.x.....:...x::..:.....:..........x.--:.............:.:.:. 38M2D20M 45/58 77.6% 58/94230402 0.0% 2/58 3.4% 53655966 NA +3145 chr4 + 190214555 76167651 76167650 76167703 53 CCTTTCCTTTCCCTCCCTCCCTCCC---CCCCCCCGCTTTTTTTTTTTTTCCTGAG chr4 + 94230402 56436025 56436024 56436080 56436025 56436024 56436080 56 CCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTTTTTCCTGGG ..:..::...::.....:...x...---.......x:.................:. 25M3I28M 43/53 81.1% 56/94230402 0.0% 3/53 5.7% 19731626 NA +3169 chr4 + 190214555 76170261 76170260 76170343 83 AAGTATAAGTGCTTCATACACATTATTTTATTTAATGCTCCCAACAGCCCAGTAAAGTCAGAACTATTAGCCTCACTTTGCAT chr4 + 94230402 69039367 69039366 69039449 69039367 69039366 69039449 83 AAAAATAGGTGACTTACACACATTATTTTATTCTATGCTCCAAACATCTCAAATAAAATGTAACCTTTAGTATAAATATGCAT ..:x...:...x:.:.:...............:x.......x....x.:..:xx..:x::x...:x....:x.x.x.x..... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 7130894 NA +3235 chr4 + 190214555 76191712 76191711 76191785 74 TTCTTCTCTCTCTTTCTCTCTCTCTCCCCTCCCTCCCTCCCTCCCTCCCTGTCTTTCTTTCTTTCTTCTTTTTT chr4 + 94230402 53757784 53757783 53757857 53757784 53757783 53757857 74 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ....::..:x.....:..x.::::.xxx::...:...:...:......:.x.:....:..:...::.:...... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 22433928 NA +3046 chr4 + 190214555 76191713 76191712 76191761 49 TCTTCTCTCTCTTTCTCTCTCTCTCCCCTCCCTCCCTCCCTCCCTCCCT chr4 + 94230402 4662707 4662706 4662755 4662707 4662706 4662755 49 TCTTCTCTCTTTTTCTCTCTCTTCCCCCCCCCTTCCCTGCACACTCCTT ..........:...........::....:....:..::x.x.x....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 71529006 NA +3026 chr4 + 190214555 76237356 76237355 76237389 34 TTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTGG chr4 + 94230402 7161731 7161730 7161764 7161731 7161730 7161764 34 TTTTTTTTTGTTTGTTTGTTTGTTTTTCTTTTGG ...........................:...... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 69075625 NA +3140 chr4 + 190214555 76244509 76244508 76244559 51 ATATGTTTGTTTGCAGGCATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 43275283 43275282 43275333 43275283 43275282 43275333 51 ATATCTGTGTTTGAACAGATTCTTCTTTTTTTTTCTTTTTTTCTTTTTCTG ....x.x......x.x:x................:.......:.....:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 32969226 NA +3109 chr4 + 190214555 76247889 76247888 76247930 42 GGTTATCTTTTCACTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847276 45847275 45847317 45847276 45847275 45847317 42 GGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ....::.....xx..........:.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 30400613 NA +5545 chr4 + 190214555 76256195 76256194 76256529 335 AGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACGACTTCAGGAAGGGCTGCCCGCCTTGCACTGGTCTGGTGACTCAGGTCCCTGTGGA-------GGGCTTTCTGCCCCAGATTTATCACAG----AGCTCCCCAACTGGCCCCAAAGAAGAGGCAGATCAAGCTGCTCAAGGAAGCAGACGT---GCTTTCCAAGCTCTCGCCAGCCCAGCAGGCTCGGAAGGCATTCCTGGAGGACGTGGAGGCCCACCTGACCCCACATCCCTTAGCGCTCTACCTGAATCTGGAAGAAGCTATGCCCATAGAGGTGATG chr4 + 94230402 51499382 51499381 51499722 51499382 51499381 51499722 341 AAAGCAGACTGCAGTTCTCAGACTCACTTAATGGCCAGCACTGGATATTCCTGAGAAAAGGCCTAGATGACTTCAGAGGTGGCTTTCCTCCT-----TCATCTGAAAACATGATTGTGTATGGAAAAAAGCGACCAATTATCCTGAAAAGCAGCACAGTAAAATCTTCACACACAGCTCCACGGAACA---AAAGCAAGAAGTCCAGCAAAATACAGGTCTGTCTTTCCCAGCTCCGTCCTCAGCAGCAGAGCAGGAGGGATTACATTGCGTGCACAGAGTGCTGTCTGAATCAGCATCCTTCAGTGCTCTGTTCATGTTTGGAAAAAACTATCTCCCGAAAGGCAATG .:.:.:.:...x.....:.x:x...x..xx.::...:...x.x.:....:.::.....:..x..:..:........:::x....x:..x...-----.x:....:x:..x:::x.x:x.:....-------.:x.xx.:xx..:x.:.xx:.x.....----.x..:.x..xx::..:...x:...x.---.:.x....xx.::..:x:..::.x.x..---x......x.....:xx..xxxx......:x:x...:..xx.x.x.x.x.x:.:::...xx.:::....x:.x:.....:.:..:.....:::::x:.:.....:..:....x:..xx.:...::... 92M5D27M7I27M4I26M3D28M3I127M 189/327 57.8% 341/94230402 0.0% 22/327 6.7% 24756813 NA +3210 chr4 + 190214555 76276343 76276342 76276392 50 GGGAGGGGGTTACTTTTTTTTGTTTGTTTGTTTTTTTGTTTATTTGGGGA chr4 + 94230402 73905341 73905340 73905390 73905341 73905340 73905390 50 GGAAAGGAGTTGCTGTTTTTTGTTTGTTTGTTATTTTGTTTTTTAGGGAA ..:.:..:...:..x.................x........x..x...:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 2371002 NA +3371 chr4 + 190214555 76281568 76281567 76281647 80 TCTGTGGTATATGTGTGTGTATATATAAATCCTTATTTGCCATTGATATTATTGTGGCTCATTTTTGTATCTTAACATTT chr4 + 94230402 81507248 81507247 81507327 81507248 81507247 81507327 80 TTTGAGGTGTTTGTGTGTGTATATGTAATTTTTCTTTTTCCTACAAAAGTGTTGTGAATTATTTGTGTGTTTCAACATTT .:..x...:.x.............:...x.::.:x...x..xx::.x.x.:.....:x.:....x...:.:.:....... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -5225680 -89004722 +3438 chr4 + 190214555 76299336 76299335 76299414 79 GTGGCACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATCACTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:.........::::.......:x.xx.x...x................x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 266135 NA +3375 chr4 + 190214555 76302721 76302720 76302811 91 TTTCTTTTCTTTTTCTTTTTGGGGGGGGGGGGTTGGTGGAAGGTGGGGG-------GGGGGGGTCTCCCTGTGTTGCCCAGGTTGGTCTCGAACTCCT chr4 + 94230402 62333906 62333905 62334003 62333906 62333905 62334003 98 TTTCTTTTTTCTTTTTTTTGGGGGGGGGAGGGCTGGGGGGGGGGAAGGGGTTGAGTGTGAGAAGCTGCTTGTGTGGTTATGAATGGTTATGAATTCCT ........:.:...:....x........:...:...x..::..x::...-------.x.:.::x..x.:.....x.::xx.:x....:x:...:.... 49M7I42M 61/91 67.0% 98/94230402 0.0% 7/91 7.7% 13968815 NA +3068 chr4 + 190214555 76319439 76319438 76319494 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 74824439 NA +3121 chr4 + 190214555 76319441 76319440 76319494 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -13710635 -80519767 +3282 chr4 + 190214555 76319441 76319440 76319496 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 74824441 NA +3014 chr4 + 190214555 76319443 76319442 76319501 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 24846953 NA +3282 chr4 + 190214555 76319445 76319444 76319500 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 74824445 NA +3014 chr4 + 190214555 76319447 76319446 76319505 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 24846957 NA +3174 chr4 + 190214555 76319448 76319447 76319501 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -9228972 -85001430 +3499 chr4 + 190214555 76319450 76319449 76319515 66 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT-----ATATATGTCCAT chr4 + 94230402 85548420 85548419 85548490 85548420 85548419 85548490 71 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .............:.:x.....:...:.:.:.::...:..........x.....-----..:x..:..... 54M5I12M 52/66 78.8% 71/94230402 0.0% 5/66 7.6% -9228970 -85001432 +3222 chr4 + 190214555 76319454 76319453 76319507 54 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............x.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -9228966 -85001436 +3008 chr4 + 190214555 76319456 76319455 76319509 54 AAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...........x.x.xx.....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -9228964 -85001438 +3070 chr4 + 190214555 76321731 76321730 76321798 68 GTGTACACATATATATGTAAATATATATATTTTTTATATATATATAATAAATATATATATGTATATAT chr4 + 94230402 27158678 27158677 27158745 27158678 27158677 27158745 68 GTTTATACAGACTTATATAAGTATAGATATTTGTGATATATATAGGAAATATCTGTATATATATCTAT ..x..:...x.:x...:...:....x......x.x.........x:.x.x..x.:.....:...x... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 49163053 NA +3209 chr4 + 190214555 76336042 76336041 76336111 70 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAGCCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:...........::........x.xx.x...xx:.x...:.....:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 302845 NA +3211 chr4 + 190214555 76348299 76348298 76348364 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.::........x.xx.x...xx:.x.......:.... 6M2D58M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 315098 NA +3111 chr4 + 190214555 76354184 76354183 76354288 105 GCCATAAGCGCCATCAGGAAGGAT-AAGCACTGCTTTAGGTTCCCAAAGGCAAAAAAAAAAAAAAAAAAAAAAAGGAGAAAGAAAAAAGTGAATTCAGGATAAGAG chr4 + 94230402 61492416 61492415 61492519 61492416 61492415 61492519 104 GCCAAAGACTTCATTTGAAGGGTTCAAGAA--GCATTAGATGTGCAAATGCAAAAAAAAAAAAAAAAAGAAAGATCAGTATGTGGGAAGTAAACTAAGTGCAAGGG ....x.::.x:...:x.:.:..x.-...x.--..x....:.x:x....x...................:...:.xx..x.x.x:::....:..:.x..x::...:. 24M1I5M2D74M 69/103 67.0% 104/94230402 0.0% 3/103 2.9% 14861768 NA +3087 chr4 + 190214555 76361422 76361421 76361491 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 328225 NA +3022 chr4 + 190214555 76366589 76366588 76366657 69 CTACAATCTTGTAGGGAAAAGGAGACACTGCTACATAAACACACACACAAACACACACACACACACACA chr4 + 94230402 80695897 80695896 80695965 80695897 80695896 80695965 69 CCATAATCCAGCAGTGAAAAAATAAAATGGCTCTAAAACCATTAACACAAGCACACACACACACACACA .:.:....:x.:..x.....::x:.x.:x...x:.x..x..:xx......:.................. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -4329308 -89901094 +3445 chr4 + 190214555 76369075 76369074 76369157 83 CATGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--....:.:...........::........x:xx.x...x::......:..:.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 335878 NA +3113 chr4 + 190214555 76390979 76390978 76391046 68 TAAAGCAAATATTATCAGAAATAAAAGAGAGATAAGCCTCAATACAACAATAGCTAGAGACATCAACA chr4 + 94230402 77899417 77899416 77899484 77899417 77899416 77899484 68 TACATTAAATAGGATCAGAAATAAAAGAAAAACAAACCTCAATATAGGGGTGAACAGAGACATGGGCA ..x.x:.....xx...............:.:.:..:........:.:x::.::x:........x::.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -1508438 -92721964 +3281 chr4 + 190214555 76411262 76411261 76411343 82 CATGGTGGTACTTGCCTGTAGTCCCAGCTACGTGGAAGGGTGAGGTGGGAGGATCCCTTGAGCCCAAGAGTTCAAGGCTGTA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::.....:.x:.--......:........x..:....x....x:xx.x.:.x.x.....:....::..:.:x:....... 14M2D66M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 378065 NA +3441 chr4 + 190214555 76430761 76430760 76430834 74 GTGTGCCTGTAATCCCAGCTACTCGAGAGGCTGTGACAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:.........:..:......x.x.xx.x...x...........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 397557 NA +3197 chr4 + 190214555 76432542 76432541 76432614 73 TGCACCTGTAGTCTCAGCTACTTGCGAGGCTGAGGTGGGAGCACTGCTTGAGCCTGGGAGATTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......::..........x:........x:xx.x.x.x::.....:..::.:..x..x:....::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 399337 NA +3734 chr4 + 190214555 76462231 76462230 76462314 84 ATACAAAAATGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGGAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:xx.::...x......:...........::........x:xx.x...x.:...........:..x:xx:..:..x.. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 429037 NA +3528 chr4 + 190214555 76474776 76474775 76474869 94 AAAAAGCCAGACGTGGTGATACATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::::x.x..:::...:.:..:.--....:.:............:........x.xx.x...x::........::.:..x.xx:..:..:.. 25M2D67M 61/92 66.3% 92/94230402 0.0% 2/92 2.2% 441590 NA +3783 chr4 + 190214555 76484443 76484442 76484513 71 CACCTGTAGTCCCAGCTACTTGGGAGGCTGAGCTGGGAGGATCATTTGAGCCCAGGAGTTGGAGACTATAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:...........::.........:xx.x.:.x..:....:.....:..:.xx:.:..:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 451236 NA +3586 chr4 + 190214555 76497729 76497728 76497800 72 GCACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::.:......x.xx.x...x..........::.:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 464523 NA +3169 chr4 + 190214555 76515091 76515090 76515157 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAAGAGGTAGAAGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::..........::..x.xx::.:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 481880 NA +3390 chr4 + 190214555 76521268 76521267 76521324 57 CTGTGTGTATGTATATGTGTGTGTGTGCGCACATATGTGTGTGTGTGCACACATGTG chr4 + 94230402 5214260 5214259 5214316 5214260 5214259 5214316 57 CTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ..::.......:..x..::............x.::........::....x.::.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 71307008 NA +3200 chr4 + 190214555 76528103 76528102 76528359 257 GTAACAGTGAATTAATTTACACT---GAAACATGTTGCAGGAATAAATTTTTACAATCACATTTGTCAAGTGAGCCAAGAAGTAATTTTATTTCTCTATAATTGAATTAGATTAACTTATTATCCCCAATTTCTACTTGGTAATAGAAAACTATATCTTTCTAATTCAAGATAAATCCAATTACTTCTTGTTTAGAAC---TCAGTCAACTTAGTCTTTCTTTCTTTCCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTT chr4 + 94230402 44980109 44980108 44980350 44980109 44980108 44980350 242 GTAAAAATGACTCGGCTAACAATTAAGGAACATATCGCAGACTTA--TTTTCCCTATTATAT-------AGAATTTGAGAAACAAAGACATTTCT------TAGACTTTTATAGCCATGGTAGCACTTCTTTGCTTTTGGTTATAGAGACATATTACTGCCTGCTT---GGAAAATGCAAACATTT---GCAAAGAACATATAAAGGAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTT ....x.:...x.::::.x...x.---.:.....:.:....:xx..--....:x.x..:.:..-------:x:.x:::....::..xxx:......------.x..x..xx..x:x.x.:x..x.x.:xx...x:x:.....x.....:.xx...xx..x:..:x..---.:x....x...x:.:..---.:xx.....---.x.:xx..:x....::x.:.xx.:......:.........:x.:............:..... 23M3I19M2D15M7D26M6D65M3D17M3D9M3I62M 147/236 62.3% 242/94230402 0.0% 27/236 11.4% 31547994 NA +3068 chr4 + 190214555 76528323 76528322 76528380 58 TCCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTGAGACAGGGTCTTCCTATGTC chr4 + 94230402 32437272 32437271 32437329 32437272 32437271 32437329 58 TCCTGGCTCTTCTTCTTCTTCTTTTTTTTTTTTTGTTAAACTTAATTCTTCCTACTTC ....xx:...........................x..:.:x:x::x........:x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 44091051 NA +3045 chr4 + 190214555 76561679 76561678 76561726 48 GTGATGCTAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGACAAAAGACA chr4 + 94230402 11613202 11613201 11613249 11613202 11613201 11613249 48 GCAATGTTAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGTCAGCAAACA .::...:..................:.:.......:..x..:x.:... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 64948477 NA +3495 chr4 + 190214555 76589331 76589330 76589409 79 GTGGCGCATGCCTGTAATCCCAGCTAATCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.:.......x.:.::........x.xx.x...x.:..............x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 556130 NA +3968 chr4 + 190214555 76603289 76603288 76603360 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 570083 NA +3166 chr4 + 190214555 76603395 76603394 76603465 71 GCAAGAGAATGAGACTCTGTCTCAAAACAAAAACAAACAAACAAACAAAAACCCACAAACAAAAAAAAACC chr4 + 94230402 23148105 23148104 23148175 23148105 23148104 23148175 71 GTGAAACAACAGGGACCTATAATAAAGACAAAACAAACAAACAAACAAAAAACCACACACAACACAAAACC .::.:.x..:::.:x:..:.xx:...:xx......................x.....x....x.x...... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 53455290 NA +3424 chr4 + 190214555 76603402 76603401 76603468 67 AATGAGACTCTGTC-----------TCAAAACAAAAACAAACAAACAAACAAAAACCCACAAACAAAAAAAAACCGTA chr4 + 94230402 28037150 28037149 28037227 28037150 28037149 28037227 78 AGTAAAACCCTGTCCTGAGGTGGCATTAAAAACAAAACAAACAAACAAACAAAAATCCACAAGCAAAGAGATAGTGTA .:.:.:..:.....-----------.:....xx......................:......:....:.:.x.x:... 14M11I53M 53/67 79.1% 78/94230402 0.0% 11/67 16.4% 48566252 NA +3805 chr4 + 190214555 76605873 76605872 76606002 130 TATCATTTCATAGTTCCAAAAATGTATTAAAGGCACAATTTTCTCTCTCTCTCTCTCTCTCTATATATATATATACACATATATATATACATATATATACACATATACACAC-ACACACATATATATATAT chr4 + 94230402 60831505 60831504 60831623 60831505 60831504 60831623 119 tatgattcaacagttcccata------------caTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x...:x.:......x.x.------------..:.x:.x.....x.............x.:.......:.:..:...:.:.:::.:..x.x..x.....:x....::xx.-:::.:...:.:.:..... 21M12D79M1I18M 80/118 67.8% 119/94230402 0.0% 13/118 11.0% 15774368 NA +3449 chr4 + 190214555 76605907 76605906 76606012 106 ACAATTTTCTCTCTCTCTCTCTCTCTCTATATATATATATACACATATATATATACATATATATACACATATACACACACACACATATATATATATATATATTTTT chr4 + 94230402 60831525 60831524 60831627 60831525 60831524 60831627 103 acaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC---TGTGCGCATGTGTGTATATTTCT ...xx.:.x.....x.............:.:.......:.::.:.:.:.:.:::...:x.x..x.:....x..:.::xx.---::.::::..:.:.:.......:. 80M3D23M 65/103 63.1% 103/94230402 0.0% 3/103 2.9% 15774382 NA +3168 chr4 + 190214555 76605912 76605911 76606000 89 TTTCTCTCTCTCTCTCTCTCTCTATATATATATATACACATATATATATACATATATATACACATATACAC-ACACACACATATATATAT chr4 + 94230402 60831534 60831533 60831623 60831534 60831533 60831623 90 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT .:...x.............x.x.......:.:........:.:::.:.:x:x..x...:.:x:....:xx.-:::.:..::.:.:..... 71M1I18M 58/89 65.2% 90/94230402 0.0% 1/89 1.1% 15774378 NA +3008 chr4 + 190214555 76605927 76605926 76605968 42 CTCTCTCTATATATATATATACACATATATATATACATATAT chr4 + 94230402 70237110 70237109 70237151 70237110 70237109 70237151 42 CTCTCTCTCTATATATACATACACATACATATATACTTTTAT ........x........:.........:........x.x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 6368817 NA +3843 chr4 + 190214555 76605933 76605932 76606008 76 CTATATATATATATACACATATATATATACATATATATACACATATACACACACA-----------CACATATATATATATATATAT chr4 + 94230402 23247720 23247719 23247806 23247720 23247719 23247806 87 CCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:..:.:.:...::.....:..x...:x......:..:.......:.........-----------:....:x...x.......... 55M11I21M 59/76 77.6% 87/94230402 0.0% 11/76 14.5% 53358213 NA +3470 chr4 + 190214555 76605937 76605936 76606008 72 ATATATATATACACATATATATATACATATATATACACATATACACACACACA-----------CATATATATATATATATAT chr4 + 94230402 23247722 23247721 23247804 23247722 23247721 23247804 83 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATAT ..:.:.:...:....:.:..x...:x.:....:......:.............-----------:.:..:x...x........ 53M11I19M 55/72 76.4% 83/94230402 0.0% 11/72 15.3% 53358215 NA +3096 chr4 + 190214555 76605945 76605944 76606005 61 ATACACATATATATATACATATATATACACATATACACACACACACATATATATATATATA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x.:....x.:....:..:.......:..::......x....x...:....x:..:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 15335170 NA +3004 chr4 + 190214555 76605969 76605968 76606037 69 ATACACATATACACACACACACATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTCTGAGAC chr4 + 94230402 18734805 18734804 18734873 18734805 18734804 18734873 69 ATAGACATGTACACACACACACATATGTATACATGTATTCATTTGAATCTGTGTTCTTTCCTTCTGGAC ...x....:.................:....:..:...x:x...xxx.:.x.x..:...::.::x:... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 57871164 NA +3249 chr4 + 190214555 76606574 76606573 76606645 72 GTGCCTGTAATCTCAGCTACTTGAGAGGCTGAGGCAGGACAATCACTTGAACCCTGGAGGCAGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.::...........:........x.xx.xx..x...........x.:..x:xx:..:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 573368 NA +3360 chr4 + 190214555 76612810 76612809 76612882 73 TGCTCCTGTAGTCCCAGCTACTTGGGAGGCAGAGGCAGAAGGATCACTTGAAGCCAGGAGTTTGAGTTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:...........::....x...x.xx:x.:.x........x....:..:..x:.x:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 579605 NA +3459 chr4 + 190214555 76617162 76617161 76617234 73 CTAGACCTTGGGAAAATTACTTAATCTTTCTGTGCCTCAGTTTCATTATCTGCAGAAATAGAGTTATTTGTGA chr4 + 94230402 83501138 83501137 83501209 83501138 83501137 83501209 72 CCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTA-AAATGGAGCTGATAGTAA .:....::....x...........:..x.x.............:x::.:...:.-....:...:.:x.x..:. 54M1D18M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% -6883976 -87346426 +3019 chr4 + 190214555 76620050 76620049 76620109 60 AACAGAACAGGAATCTATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAAAAGA chr4 + 94230402 18047932 18047931 18047991 18047932 18047931 18047991 60 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAA .........:xxx.:.x...:............x........xx.....x:.x.....:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 58572118 NA +3150 chr4 + 190214555 76626689 76626688 76626753 65 CTTTACAGAGGAAGGAATTGAGGCTCAGAGAGGTGAAACACCTTGGCCAAGATCACCTAGTAAGT chr4 + 94230402 33545653 33545652 33545717 33545653 33545652 33545717 65 CTTTACAGAGGAGGAAATGGGGGCACAGAGAGGTGATATCACTTGCCTCAGACTGCACAGGAAGT ............:.:...x.:...x...........x.:xx....x.:x...:::.x:..x.... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 43081036 NA +3037 chr4 + 190214555 76645523 76645522 76645572 50 TCAAAAGAGCCTATTTAAGTAGATGAGCATAGATAGATAATTCTGGGAGA chr4 + 94230402 67741816 67741815 67741865 67741816 67741815 67741865 50 TCAGAAAATTCCATTTAAGTGGGTGGACCTGGATAGATAATCCTGGGAGA ...:..:.x:.:........:.:..::.x.:..........:........ 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 8903707 NA +3541 chr4 + 190214555 76647765 76647764 76647838 74 GTGCACCTGTAGTCCTAGCTACTTGGAAGGCTGAGGTGGGAGGATTGCTTGAGCCCTGGAGGTTGAGTCTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.........:.........x:xx.x.:.x::.....:...x.:..x..x:.x....:. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 614561 NA +3163 chr4 + 190214555 76652770 76652769 76652843 74 TGTGATGTATG---TGTGTGGTGTGTATAAGTGTGTGTGTGTATATATATACATATACACACACATATATAAAACAT chr4 + 94230402 83316536 83316535 83316612 83316536 83316535 83316612 77 TGAGATGCATGCAGTCTTGGGAGTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAAT ..x....:...---.x.xx..x...x..:..x..:.......:.....:.x:..:......:.....:....::x.. 11M3I63M 54/74 73.0% 77/94230402 0.0% 3/74 4.1% -6663766 -87566636 +3270 chr4 + 190214555 76662758 76662757 76662824 67 TGTGGTTCGAGCTACTTGAGAGGCTGAGGCAGGAAGATTGCTTGAGCCTAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....x..........:........x.xx.x::.x::.....:..:..:..:.:x:.....:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 629547 NA +3403 chr4 + 190214555 76674500 76674499 76674577 78 AATTTATTTTCTTCTCTCTCTTTCTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 73754464 73754463 73754533 73754464 73754463 73754533 70 AATTTATGTTCCT-------TTTATGTTCCTGTATGTCTT-CCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTTG .......x...:.-------...x.x..:..x.x.x....-...x....x.......:.................... 13M7D20M1D37M 59/70 84.3% 70/94230402 0.0% 8/70 11.4% 2920036 NA +3426 chr4 + 190214555 76674505 76674504 76674588 84 ATTTTCTTCTCTCTCTTTCTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTTTGTTTTGACACAG chr4 + 94230402 53757783 53757782 53757866 53757783 53757782 53757866 84 ATTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCCACAG ...:.....:x...:....x.:.::.xxx.::.:::..::..::...:.:.......::.......:.....x..::xx..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 22916722 NA +3277 chr4 + 190214555 76674519 76674518 76674590 72 CTTTCTCTTTC---TTTCTTTCTTTCCTTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTTTGTTTTGACACAGGG chr4 + 94230402 10558378 10558377 10558452 10558378 10558377 10558452 75 CCTTCTCTTTTGCATTTCATGCTTTCCATTGTTTTTTTTTCCTTTTCCTTATTTTTTTCTTGTCTTGACACAAAG .:........:---....x.x......x.:x..::..::.::....::..x.......:....:........::. 11M3I61M 52/72 72.2% 75/94230402 0.0% 3/72 4.2% 66116141 NA +3093 chr4 + 190214555 76674530 76674529 76674584 55 TTTCTTTCTTTCCTTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTTTGTTTTGAC chr4 + 94230402 84739527 84739526 84739581 84739527 84739526 84739581 55 TTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTTGAC .........:...:.x...x.:x...:.:.:......x.x.......x....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -8064997 -86165405 +3044 chr4 + 190214555 76674531 76674530 76674589 59 TTCTTTCTTTCCTTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTTTGTTTTGACACAGG chr4 + 94230402 59557954 59557953 59558012 59557954 59557953 59558012 59 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTTACAGG ..::.:x......:..:...:.::.......:....::x......:x.....x:..... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 17116577 NA +3083 chr4 + 190214555 76717031 76717030 76717193 163 CAATTTTTGTTTACCTGAGAAAGACTTTACTTCTTTCAACACTTTTGAAGAATAATTTCA----------CAGGATCCAGAATCTATGTTGGTGTTTTTTGTTTGTTTGTTTTTCCTTTCAACACTTTCAATCTTTTACTCCACTCTCTTCTTTCTTGCATGGTTTCTGAGGA chr4 + 94230402 42729574 42729573 42729743 42729574 42729573 42729743 170 CAATCCCCATAAGCCTTACACATAACTTCCTATTTTCCCTACTTTCTATTAGTATTTCCAATATCTTTTCCAGTAT---AAGTTTGTTTCATTGTCTTTTGTTTGTTTGTTTTTACTATTAAAACTTTTGATTCTGTTTTGGATTTCATGCTTTCTTCCTTAATGACTGTGAA ....:::::.xx:...x.x.x.x.x:..x..x:....xx:.....:x.xx.:..x..:..----------...x..---:.:.:.:.x.::x...:..................x..x.:..x.....::..::.x.x:.xx.:.::x.x.......x.x.::.xx...x.:. 60M10I6M3D94M 97/160 60.6% 170/94230402 0.0% 13/160 8.1% 33987457 NA +3191 chr4 + 190214555 76717115 76717114 76717174 60 TTTTTTGTTTGTTTGTTTTTCCTTTCAACACTTTCAATCTTTTACTCCACTCTCTTCTTT chr4 + 94230402 25227200 25227199 25227259 25227200 25227199 25227259 60 TTTTTTGTCTGTTTGTTTTTCCTGATGAAACTTTGGGTGTTTTCTTTCACCCTTTTCTTT ........:..............xx::.x.....x::.x....x:.:...:..:...... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 51489915 NA +3172 chr4 + 190214555 76720137 76720136 76720180 44 AAAGTGTTTTTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 45983633 45983632 45983676 45983633 45983632 45983676 44 AAAGTGTTTTCTGGGTTTTGTTTTTTTGTTTTTTATTTTTTTTT ..........:.:......x.......x......x......... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 30736504 NA +3096 chr4 + 190214555 76721171 76721170 76721240 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 687974 NA +3492 chr4 + 190214555 76727749 76727748 76727830 82 CATGGTGGCACAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGGAGGTGGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA-CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..-.x....:.:...........::........x.xx.x...x::...........:..x.xx::.:..:.. 12M1D69M 57/81 70.4% 81/94230402 0.0% 1/81 1.2% 694552 NA +3340 chr4 + 190214555 76735838 76735837 76735899 62 TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.:::...x.:.........x.:......x........:.:..:...:.....x....::. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 75240844 NA +3068 chr4 + 190214555 76735842 76735841 76735897 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 75240842 NA +3312 chr4 + 190214555 76735844 76735843 76735915 72 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATTTTAGTGATGG chr4 + 94230402 90030076 90030075 90030142 90030076 90030075 90030142 67 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA-----ATTTTACTGGTAG ...x.......xxx:...::..............:.:.:............x..-----......x..:.:. 54M5D13M 53/67 79.1% 67/94230402 0.0% 5/67 7.5% -13294232 -80936170 +3014 chr4 + 190214555 76735846 76735845 76735904 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 25263356 NA +3529 chr4 + 190214555 76735846 76735845 76735953 108 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA------TATTTT-------AGTGATGGTATCTTCC-----------CCACTCGATAGTGTTTCAGTTAACCATCAG chr4 + 94230402 1495000 1494999 1495129 1495000 1494999 1495129 130 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTTTGGAGTGGGGTGGTTGTGTCCTTCAGCCCGCAGTGCTAATTGTTATTGTTCCCA--AACCATCAG ...x.:.........x.:...............:.:..:...:.....x....::.------..:...-------:...:.x..:..:.:.-----------.:.x.:.x..x....:.x:--......... 56M6I6M7I16M11I19M2D9M 80/106 75.5% 130/94230402 0.0% 26/106 24.5% 75240846 NA +3282 chr4 + 190214555 76735848 76735847 76735903 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 75240848 NA +3157 chr4 + 190214555 76756384 76756383 76756438 55 CCTTCTCTTATCACTCTCTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTAAATA chr4 + 94230402 64144315 64144314 64144369 64144315 64144314 64144369 55 CTTCCACTCATCACTGCTATTTTCTCTCTCTCTCTCTTTTTTGTTTTTTCAGATA .:.:.x..:......x::x:...............:......x......:.:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 12612069 NA +3102 chr4 + 190214555 76756391 76756390 76756430 40 TTATCACTCTCTCTTTCTCTCTCTCTCTTTTTTTTTTTTT chr4 + 94230402 6554017 6554016 6554056 6554017 6554016 6554056 40 TTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..:.:.:.......:...........:............. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 70202374 NA +3031 chr4 + 190214555 76756394 76756393 76756443 50 TCACTCTCTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTAAATATCCCT chr4 + 94230402 40429933 40429932 40429982 40429933 40429932 40429982 50 TCCTTCTCCCTTGCTCTCTCCTTTTTTTTTTTTTTTCATTAAATATCTTT ..x:....:...x.......::.:............:x.........::. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 36326461 NA +3284 chr4 + 190214555 76762037 76762036 76762084 48 GATCTCAGAAGCTGACCAGGGTCAGGCCTGGTTAGTACTTGGATGGGA chr4 + 94230402 2289847 2289846 2289894 2289847 2289846 2289894 48 GATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGA .......x.....:.:....:.::....x...:...:........... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 74472190 NA +3140 chr4 + 190214555 76810613 76810612 76810685 73 TGTACCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCTCAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..x.:....:...........::........x:xx.x.:.x::.....:.:...:..x.xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 777408 NA +3230 chr4 + 190214555 76825058 76825057 76825129 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACATAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x..:......x:..:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 791852 NA +3441 chr4 + 190214555 76832795 76832794 76832867 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCTCTTCAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.x:.x...x.x...x.......:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 799590 NA +3017 chr4 + 190214555 76838475 76838474 76838521 47 GTGGAAATATTTCCTTTTTTCTTTCTTTCTTTTTTTTTTCTTTTTTT chr4 + 94230402 49122574 49122573 49122620 49122574 49122573 49122620 47 GTGGAAATGTTTGCTTTCTTCTCTCTTTTTTTTTTCCCTTTTTCTTT ........:...x....:....:.....:......:::.:...:... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 27715901 NA +3107 chr4 + 190214555 76838475 76838474 76838531 57 GTGGAAATATTTCCTTTTTTCTTTCTTTCTTTTTTTTTTCTTTTTTTTTTTGAGATG chr4 + 94230402 54888929 54888928 54888985 54888929 54888928 54888985 57 GCAGAATTGCTTCTTGTTTTCATTTCTTCCTTTTTTTTTCTTCTTTGTTTTCAGATG .::...x.::...:.x.....x..::...:............:...x....x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 21949546 NA +3086 chr4 + 190214555 76840038 76840037 76840101 64 TCTTCTTCTTTCTTTCTCTTCTCTTCTCTCTCTCTCTCTCTGTCTCTCTTTCTCTCTTTCCAGT chr4 + 94230402 81121922 81121921 81121985 81121922 81121921 81121985 64 TCTTATCATTTCTTTTTCTTCCCTTTCTACTTCCTCCCTCTACCTCACTTTCTTCTATTTCAGT ....x.:x.......:.....:...:::x..::...:....::...x......:::x..:.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -4281884 -89948518 +3281 chr4 + 190214555 76869270 76869269 76869329 60 TCAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAGAAAACAAACAAAAAAACCCAGCA chr4 + 94230402 92660645 92660644 92660704 92660645 92660644 92660704 60 TTAAAAAACATTAAAATGAGAGAAAGAAAAAGAAAAGCCAACAAAAAAGAAAAGCGAGCA .:......x.xx....x..:.................xx......x..:....x.x.... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% -15791375 -78439027 +3091 chr4 + 190214555 76869274 76869273 76869323 50 AAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAGAAAACAAACAAAAAAAC chr4 + 94230402 67558794 67558793 67558843 67558794 67558793 67558843 50 AATAAAACAAAAAGCAGGAGAAAAAAAGAGCAGAAAACAAACAAACAAAC ..x....x......x.:..:.:.......:x..............x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 9310480 NA +3153 chr4 + 190214555 76873377 76873376 76873435 59 TCTCAAAAAAAAAAAAAAAGAAAAAAGAAACAAAAACAAAACAAACAAACAAAACCAAG chr4 + 94230402 69716314 69716313 69716372 69716314 69716313 69716372 59 TTTAAAAAAAAAAAAAACACCCTCAAAAAAAAAAAGCAAAACAAACAAACAAAACTGAG .:.x.............x.xxxxx..:...x....:...................::.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 7157063 NA +3057 chr4 + 190214555 76877664 76877663 76877722 59 TTCCTTTTTATGGCTGCATAGTATTCCATTGTGTATATATATATATATATATATATATA chr4 + 94230402 28991164 28991163 28991222 28991164 28991163 28991222 59 TTTCTTCCTAAGCTTTCTGAATATTTCATTTTGTACATACATACATATATATATATATA ..:...::..x.x:.x.xx.:....:....x....:...:...:............... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 47886500 NA +3255 chr4 + 190214555 76900826 76900825 76900906 81 AGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAAAAAAAACAAAAAAAAAAAACAAAC----------------AAAGAAAGAAAAGAAAAGAGCT chr4 + 94230402 12520817 12520816 12520913 12520817 12520816 12520913 97 AAGCTTCATTTGAAAAAAAAAAAAACCAAAAAATGAAAGAACAATAACAACAAACAAATGGGTAAAACTGGACAAAATGAGATAAAATAAATGGGCT .::..:.:.:.x.............x.......x:...:.....x..x..x.......:----------------..x..:.x....x...x.:... 59M16I22M 61/81 75.3% 97/94230402 0.0% 16/81 19.8% 64380009 NA +3199 chr4 + 190214555 76900837 76900836 76900901 65 CAAAAAAAAAAAAAACAAAAAAAAAAAAAACAAAAAAAAAAAACAAACAAAGAAAGAAAAGAAAA chr4 + 94230402 22790718 22790717 22790782 22790718 22790717 22790782 65 CAAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAGCCTGAAATAGATAAGAAAA ........x..........x........xx..x....:..x..x.:x.x:.:.x...x....... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 54110119 NA +3011 chr4 + 190214555 76900850 76900849 76900897 48 AACAAAAAAAAAAAAAACAAAAAAAAAAAACAAACAAAGAAAGAAAAG chr4 + 94230402 22790716 22790715 22790763 22790716 22790715 22790763 48 AGCAAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAG .:........x..........x.........xx.....::..x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 54110134 NA +3426 chr4 + 190214555 76918857 76918856 76919008 152 CAATAAAAAAAAAATAAATAAATAAAAAA------------ATAAAAAATAAAAAAATAAAAAAATAAAAATAAAATAAAATAAAAAAAAAGGAAAAAAAAAAAAACAATTGACATACCTTGACTAAAAAATGCTTGCTGCAAAGATACTAATGATCATATGAG chr4 + 94230402 43574198 43574197 43574346 43574198 43574197 43574346 149 CAGAAGAAAAAAATTAAGTGGATAGGTAATTTTTAATTCTGAGGAAAAAGAAATAAATGAAAAAAGGTGGTTAAAATAAAACCAAAAACAAACAAACAAAAAAAACCCACCAAGAT-----------AAAATGTTT-CCACAAAAA---GAATTATTGCATGAG ..:x.:.......x...:.::...::x..------------.x:.....x...x....:......x:x::x..........:x.....x..:x...x........x.x.:::.x..-----------......:..-.::....:.---x...x..:::..... 29M12I75M11D9M1D9M3D15M 95/137 69.3% 149/94230402 0.0% 27/137 19.7% 33344659 NA +3150 chr4 + 190214555 76921004 76921003 76921054 51 CAACTGTCAGCTTGGCTTGCTTGCTCTCTCTCTCTCTCTCTCTTTCTCCTT chr4 + 94230402 153449 153448 153499 153449 153448 153499 51 CAAATGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTT ...x...:x..:.......x..xx.....................:.::.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 76767555 NA +3568 chr4 + 190214555 76942986 76942985 76943057 72 TGCATGGTGGCTTGCACCTGTAGTCCCAGCTATTTGGGAGACCGGGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033195 76033194 76033264 76033195 76033194 76033264 70 TACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..::....--.....x......:.......:...::..:.:.:.x.xx.x...x.............:.. 10M2D60M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% 909791 NA +3120 chr4 + 190214555 76949771 76949770 76949821 51 CCAGCGGGACGCCGGCGAGCAGAGCGCAGCCGCGAGGGAGGCGCGAGGGAG chr4 + 94230402 3794345 3794344 3794395 3794345 3794344 3794395 51 CCAGCAGGACACTGGCACCCAGGGCGCAGCCTCAGGGGGGGCCCGAGGGAG .....:....:.:...:xx...:........x.::...:...x........ 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 73155426 NA +3241 chr4 + 190214555 76967058 76967057 76967126 69 GTGGTGGCTCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAGTCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x....:.:...........::........x.x:.x...x::.....::....:.. 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% 933857 NA +3062 chr4 + 190214555 76994901 76994900 76994946 46 TTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAATGGAACATTG chr4 + 94230402 76859463 76859462 76859508 76859463 76859462 76859508 46 TTCCTTTCTTTTTTTTTTTTTTTCTCTTAAATAAAAATGAACACTG ..::...:...............:.:..........xx.....:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 135438 NA +6537 chr4 + 190214555 76996407 76996406 76996550 144 TCTCCCCTGAAATTGCAGAATGAAGAGCTTCGAAACTTGTCTTTGTCTGGCCATGTGGGATTTGACAGCCTCCCTGACCAGCTGGTCAACAAGTCTACTTCTCAAGGATTCTGTTTCAACATCCTTTGTGTTGGTAAGTTATTC chr4 + 94230402 16642129 16642128 16642272 16642129 16642128 16642272 144 TTTTTCCTTTCATTTCAGGGTGAAGGCTGTCGTACTGTCCCCCTTTCTGGACATGTAGGATTTGACAGTTTGCCTGACCAGCTGGTTAATAAGTCAGTTAATCATGGGTTTTGTTTCAACATCCTGTGTGTGGGTGAGTATTTC .:.::...xxx...x...::.....:x:x...x.x:x.x:.::.x.....x.....:...........::.x..............:..:.....x::.xx...x..:..:..............x.....x...:...xx... 144M 102/144 70.8% 144/94230402 0.0% 0/144 0.0% 60354278 NA +9763 chr4 + 190214555 77005599 77005598 77005799 201 AGGTGAGACAGGCATTGGCAAATCCACGTTAATGGACACTTTGTTCAACACCAAATTTGAAAGTGACCCAGCTACTCACAATGAACCAGGTGTTCGGTTAAAAGCCAGAAGTTATGAGCTTCAGGAAAGCAATGTACGGCTGAAGTTAACCATTGTTGACACCGTGGGATTTGGAGACCAGATAAATAAAGATGACAGGTA chr4 + 94230402 16648324 16648323 16648524 16648324 16648323 16648524 201 AGGGGAAACTGGCCTTGGTAAGTCCACTCTCATGGACACGCTTTTCAACACCAAATTTGAAGGTGACCCAGCATCTCACTCACAGCCTGGGGTTCAGCTGAAATCCAGTACCTATGACCTGCAAGAGAGCAACGTCAACCTCAAACTGACTATTGTAAGCACAGTGGGCTTTGGGGATCAAATCAACAAAGAGGACAGGTA ...x..:..x...x....:..:.....x:.x........x:.x..................:..........xx.....xxxx.:..x..x....:.:.:...x....x.x:.....x..x..:..:.....:..xx:x..x..::.:..:.....x::...x.....x.....:..:..:..x..:.....x........ 201M 147/201 73.1% 201/94230402 0.0% 0/201 0.0% 60357275 NA +3223 chr4 + 190214555 77010180 77010179 77010246 67 TTTACCTGTGAGGAAATTGAGACACAGAGAGGTTTAGTGACTTGCTTAAGGCTGTGCAGCTAGTAAG chr4 + 94230402 82283130 82283129 82283196 82283130 82283129 82283196 67 TTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG ..:.:x::..:.....:..:.......:x..:..x.......x:.:.....:::::...:....:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -5272950 -88957452 +10756 chr4 + 190214555 77011563 77011562 77011924 362 AGGAGAGGTGAGCCTGGAGCGCTGTTCAGGGATCAGGTGATGGAAGGCCTGGATACCTAGGTAAGGACTTGGGCTTTAGCCCTTAGGAGAGAAGAAGCCATTGTGATGTTGAATGGAGGATTGTCCTGTGAAAGAGGTTTGAGACTAGAAACATGCTGTTTCTG-CATTCTAGCTATAAGCCGATAGTAGAATATATTGATGCCCAGTTCGAGGCCTACCTGCAAGAGGAATTGAAGATTAAACGTTCTCTCTTCAACTACCATGACACGAGGATCCATGCCTGCCTCTACTTTATTGCCCCTACTGGACATTCACTAAAGTCCCTGGATCTGGTCACCATGAAAAAGCTGGACAGTAAGGTA chr4 + 94230402 16649534 16649533 16649854 16649534 16649533 16649854 321 AGGAGAGGAGA-------------TTCAGAGAATTGGTCCTGGGAAG--TGAATAGCTAAGCAGCAGCTCATTTCTAAAACGCTAGCAAAGGAGTAG-----------------AGGTGGTTTACCTCTGTGAGATGT----------AAAAATCTTTTTCCTTTCATCAAAGCTACAAGCCCATTGTTGAGTTCATTGATGCTCAGTTTGAAGCCTACTTGCAAGAAGAACTGAAGATAAAGAGGGTCTTGCACAATTACCATGACACCCGGATCCACGCTTGCTTGTACTTCATTGCTCCGACAGGCCACTCACTGAAATCCTTGGACTTGGTAACAATGAAGAAGCTTGACAGCAAGGTA ........x..-------------.....:..x:x...xx...:.:.--..:...x...:.:.:x::..::xx::.x.:x.x:...x.:..:..x..-----------------:.:x.:..xx...x..x:...x..----------...x..x:.x..:..x-...:xx.....:.....x..x..x..:.x:........:.....:..:......:.......:...:.......x..:x.xx:::.x:x...:...........xx.......:..:...:.x.....:.....:..x..x..x..:.....:..:...:....::....x..x.....:.....x.....:...... 11M13D23M2D48M17D24M10D16M1I198M 222/320 69.4% 321/94230402 0.0% 43/320 13.4% 60362029 NA +3122 chr4 + 190214555 77012082 77012081 77012141 60 AGACAAAAATAAAATAAAACAAAACAAAACTAGCAAAAAAAAAAAAAAAAGTCAAGTTGC chr4 + 94230402 85614766 85614765 85614825 85614766 85614765 85614825 60 AGTCACAAAAGAAAAAAGGTGAAAGAAAACTTGCAAAAAAAAAAAAGACAGTCAAGATGC ..x..x...x:...x..::::...x......x..............:.x.......x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -8602684 -85627718 +10630 chr4 + 190214555 77014839 77014838 77015023 185 ACGTGTCTGTTTTAC---AGGTGAACATCATTCCAATAATTGCAAAAGCTGACACCATTGCCAAGAATGAACTGCACAAATTCAAGAGTAAGATCATGAGTGAACTGGTCAGCAATGGGGTCCAGATATATCAGTTTCCCACTGATGAAGAAACGGTGGCAGAGATTAACGCAACAATGAGTGTAAGT chr4 + 94230402 16650058 16650057 16650245 16650058 16650057 16650245 188 ACATCTCTGTTTCTCTCTAGGTCAACATCATTCCTATAATTGCCAAATCTGATGCCATTTCCAAAAGTGAGCTGACCAAGTTTAAAATCAAAATCACAAGTGAACTGGTCAGTAATGGGGTGCAGATCTACCAGTTCCCAACAGATGATGAATCGGTGGCGGAGATAAATGGAACAATGAATGTAAGT ..:.x.......:x.---....x...........x........x...x....::.....x....:.:...:...xx...:..:..:.x:..:....::..............:........x.....x..:.....:..x..x.....x...x.......:.....x..:.x........:....... 15M3I170M 147/185 79.5% 188/94230402 0.0% 3/185 1.6% 60364781 NA +3156 chr4 + 190214555 77016440 77016439 77016643 204 GGAAAAAAAAAAT--GCAACAATAAAAACAATAATACAAAATATATATATATATGTGTATATATATAGCATATATATATATTTTGTATTATTGTTTTTATAATATATATAGCATATAT-------ATTATATATGCTAAAATATATATATAGCATATATATACACACACATATATATATATACACATATATATATATATACACATATATATAT chr4 + 94230402 92344559 92344558 92344771 92344559 92344558 92344771 213 GGAAAAAAAAAACAAGCGACCATACAACAAATAAGAAAGAGCAGTACTAAAGCAGAGAACAAGTATATGGTCAAGACACCACAGGTAACACTGATTGCACAAAACACTTCTGATATTTTGAAAGAATCAGGCCTATTTGAATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ............:--..:..x...x..xx.....x.x.:.::.xxxx..x.xxx.x.x.:.x:....xx:.xx.x.:.:xx:xx...x:.:..x..x:.:..x.:.:x.xxx....x.-------..:.x::x.::.x:.....x...::.:x.......:...x.:x.....:.......::...:.x.x::.:xxx.::......:..... 13M2I103M7I88M 119/204 58.3% 213/94230402 0.0% 9/204 4.4% -15328119 -78902283 +3077 chr4 + 190214555 77016570 77016569 77016643 74 AATATATATATAGCATATATATACACACACATATATATATATACACATATATATATATATACACATATATATAT chr4 + 94230402 92341557 92341556 92341630 92341557 92341556 92341630 74 AATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT .....x...::.:x.......:...x.:x.....:.......::...:.x.x::.:xxx.::......:..... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -15324987 -78905415 +5963 chr4 + 190214555 77019162 77019161 77019267 106 CAGGTCCATCTCCCATTTGCAGTGGTTGGCAGCACCGAAGAGGTGAAGATTGGCAACAAGATGGCAAAGGCCAGGCAGTACCCCTGGGGTGTGGTGCAGGGTATGT chr4 + 94230402 16654667 16654666 16654772 16654667 16654666 16654772 106 CAGGCCCACTTGCCATTTGCAGTGATTGGAAGCACAGAGGAGTTGAAAATAGGAAACAAAATGATGAAAGCTCGTCAGTACCCTTGGGGCACAGTGCAGGGTGAGT ....:...::.x............:....x.....x..:...x....:..x..x.....:...:::..:..:x.x........:.....::::.........:x.. 106M 79/106 74.5% 106/94230402 0.0% 0/106 0.0% 60364495 NA +12410 chr4 + 190214555 77020494 77020493 77020676 183 TCTTGTAGTTGAGAATGAAAATCATTGCGATTTTGTGAAACTTCGAGAGATGCTGATCCGCGTGAACATGGAGGACTTGCGAGAGCAGACTCACACCCGCCACTATGAATTGTACCGACGCTGTAAGCTTGAAGAGATGGGGTTCAAGGACACTGACCCTGACAGCAAACCCTTCAGGTATGA chr4 + 94230402 16655038 16655037 16655220 16655038 16655037 16655220 183 TCTTACAGTGGAGAATGAAGCTCACTGTGATTTTGTGAAGCTGCGGGAGATGCTGATCCGTGTGAACATGGAAGACCTTCGTGAACAGACCCACACACGCCACTATGAGCTGTACCGGAGATGTAAACTGGAAGAGATGGGTTTCAAGGACACTGATCCGGACAGCAAGCCTTTCAGGTGGGA ....::...x.........:x...:..:...........:..x..:..............:...........:...:.x..x..:.....:.....x...........::.......:x.x.....:..x...........x..............:..x........:..:.......:x.. 183M 151/183 82.5% 183/94230402 0.0% 0/183 0.0% 60365456 NA +3037 chr4 + 190214555 77024719 77024718 77024767 49 CAGCCATGCAGTGCAGGAGATGGAGTTCTTATCTGAGCAAGGCAGCCTG chr4 + 94230402 934647 934646 934695 934647 934646 934695 49 CAGCCATGGGATGGAGGAGGGGCAGTTCTGATCGGAGCAAGGCAGCCTG ........x::..x.....:x.x......x...x............... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 76090072 NA +8459 chr4 + 190214555 77028619 77028618 77028766 148 TTTTCAATAGTCTTCAGGAGACATATGAAGCAAAAAGGAATGAATTCCTGGGAGAACTGCAGAAGAAAGAAGAAGAAATGAGACAAATGTTTGTTATGAGAGTGAAGGAGAAAGAAGCTGAACTTAAGGAGGCAGAGAAAGAGGTAAG chr4 + 94230402 16655688 16655687 16655835 16655688 16655687 16655835 148 TTCTCTTTAGCTTACAAGAAACTTATGAGGCCAAAAGAAACGAGTTTCTGGGGGAACTGCAAAAAAAGGAAGAGGCCATGAGGCAAATGTTTGTCCAGAGGGTCAAGGAAAAAGAAGCAGAGCTGAAGGAGGCTGAAAAAGAGGTGAG ..:..xx...::.x..:..:..x.....:..x.....:..:..:..:.....:........:..:..:.....:.xx.....:...........:xx...:..x.....:........x..:..x........x..:........:.. 148M 113/148 76.4% 148/94230402 0.0% 0/148 0.0% 60372931 NA +3011 chr4 + 190214555 77029759 77029758 77029826 68 TATATATATACACACACACACACATATATATACACACACATATACACACATATATACATACACATATA chr4 + 94230402 54963193 54963192 54963260 54963193 54963192 54963260 68 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA .:.....x:.:...x.::.....x......:.........xx:..:::.::x:.....:...:x.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 22066566 NA +3099 chr4 + 190214555 77029766 77029765 77029818 53 ATACACACACACACACATATATATACACACACATATACACACATATATACATA chr4 + 94230402 74526074 74526073 74526126 74526074 74526073 74526126 53 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..x...............:x.:.......x.:......::.:....:..:x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 2503692 NA +3152 chr4 + 190214555 77029784 77029783 77029846 63 ATATATACACACACATATACACACATATATACATACACATATATATGTGTATATATATACAAA chr4 + 94230402 63788529 63788528 63788591 63788529 63788528 63788591 63 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATAAA ........x:.x.xx..xx..:.............x...x.....:x...:.:......:... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 13241255 NA +3223 chr4 + 190214555 77063244 77063243 77063370 127 AAAAAGGCATAAGAGAAAGCTTAAAAATATCTTACTTTTCCAT------TTTTACCAACACTTCAAAACCAAATTAGAAAAGTCAGAGCAACAGTGGAAAGGGAGGTAAAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 6738213 6738212 6738339 6738213 6738212 6738339 127 AAAAAGGGACAAATGGAAGC----AAAACCTTTACGTATTCTTACTGTGTTTTAAAAATGCTGAGGAACTTG--TAATACAGTCAGACCAACTAGTTAAAAAGAGGTAAAAAAAAAAAAAAAATAGGAAAAAG .......x.:..:x.:....----...xx::....x.x.:.x.------.....xx..::..xx::...:x:--..:x.x.......x....x:xxx...::.....................x.::...... 20M4D19M6I23M2D59M 83/121 68.6% 127/94230402 0.0% 12/121 9.9% 70325031 NA +3117 chr4 + 190214555 77063291 77063290 77063370 80 ACCAACACTTCAAAACCAAATTAGAAAAGTCAG---AGCAACAGTGGAAAGGGAGGTAAAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 59222775 59222774 59222857 59222775 59222774 59222857 83 ACAAAAATCTCACAAACTTTTTGAAACAGTAAACTAAGCAAAGGAGGAAATGGAGGGAAAAAAAAGAAGAAGAAAAAAAAAAG ..x..x.::...x..x.xxx..::..x...x.:---.....x:.x.....x.....x........:..:..:........... 33M3I47M 58/80 72.5% 83/94230402 0.0% 3/80 3.8% 17840516 NA +3177 chr4 + 190214555 77064112 77064111 77064185 74 GGTGCCTGT-TAATTCCAGCTACTTGGGAAGCTGAGGCAAGAGAATCACTTGAGCCCGGGAGGCCGAGGTTACAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x:..-..:.............::.:......x.xx.x...x.......:...:.:..x::x:..:.::.. 9M1I65M 52/74 70.3% 75/94230402 0.0% 1/74 1.4% 1030909 NA +3036 chr4 + 190214555 77065971 77065970 77066043 73 TGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGAGAGGATTGCTTGAGCCCGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::........x:xx.x.:.x::.....:...:.:..x:xx...:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 1032766 NA +3060 chr4 + 190214555 77068038 77068037 77068107 70 CATGGTGGCAGGCACCTGTAATCCCAGTTACTTGGAAGCCTGAGGCAGGAAAATCGCTTTAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x....:.:....:......:...x.....x.xx.x:..x.:...x.......:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 1034841 NA +3011 chr4 + 190214555 77075864 77075863 77075905 42 GGTGAAAGGGGGGGAGGGGAGAAAAGAAAAGAAAAAAAAAAA chr4 + 94230402 82220804 82220803 82220845 82220804 82220803 82220845 42 GGGGGAAGGGGGGGAGAAGAAAAAAGGAGAGAAAAAAAAAAA ..x.:...........::..:.....:.:............. 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -5144940 -89085462 +3048 chr4 + 190214555 77075890 77075889 77075940 51 AAAAGAAAAAAAAAAAAAGAAAGGGGAAAGGGGGGAAAAATAAGAAAAAGC chr4 + 94230402 69516251 69516250 69516301 69516251 69516250 69516301 51 AAAAAAAAAAAAAAAAAGGAGAGGGGAGGGGAGGGATTTATGTGAAAAAGC ....:............:..:......::..:....xxx..:x........ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 7559639 NA +11336 chr4 + 190214555 77082380 77082379 77082605 226 CATTTGGCACCTGGGTCTGGTTCAGCTGGCGGATGAGCTGATTGATGCATTCACCCTGATAGCCAGCTGTGCCCATCTCCTTGAGGAAGCCCACTCTATTTTTGGTAGCATGACGGGCCACTGAGTGGTGGAAAGGGCACAAGAACCATGAGCTCTCCTGGAAATGCTTCCCTGGGAAGGCAGTTTCATGAATGAGGTCTTCCAAGCAAATGACACCAAACTTCCC chr4 + 94230402 56084771 56084770 56084994 56084771 56084770 56084994 224 CATTCCTCACCTG--TCTAGTTCAGCTGACGTATAAGCTGGTTGATTCCTTCACCTCTGCAGCCAGGCTTACCCATCTCCTTGAGGAAACCCACTTTATTATGTGCAGCATGGCGGGCCACTGACAGTTGAAAGGGCCACAAGAAGTCTGTGACATTTCTGAAATACTTCCCAGCTGAGTAGATTTCATGAATAAGGTCTTCCAGGCAAATAATACCAAAGTTCCC ....:xx......--...:.........:..x..:.....:.....x.x......::x::......x:x.:.................:......:....x.xx.:......:...........xx.x..:..:..x........x:x..x.x:x.:::x.....:......x.xx:..xx::..........:..........:......:.:......x..... 13M2D211M 167/224 74.6% 224/94230402 0.0% 2/224 0.9% 20997609 NA +4262 chr4 + 190214555 77082716 77082715 77082858 143 ATCCCTAGGTCACATAAGGTTCCACTATACGCAGCATTTTTAG-GTTCTTGGGGGTGGCTTTTACAAAGACACCATTAAAAATTTTCTTTAGGCGAAGTCTTGCAATGGTTCTCTGCCCCAGTAAACTCACACCATCAATCCTT chr4 + 94230402 56085597 56085596 56085739 56085597 56085596 56085739 143 ACCCCCAGGCCACATAAGGTTCTACGATCCGCAGCATCTTCAGCGATAATGGAGACAA-TTTAACGAATGTTCCAGTGAAAATTTTTCTCAGCCGCAGCAACTCGATCACTTTTCTTACCCTCATACTCACTCCTTTAATCCTT .:...:...:............:..x..x........:..:..-.x.xx...:.::::-...x..:..x::x...x.:........::.:..x..x..:xx:x.:..x::.:.::x:x..xx:.x......x..x.:....... 43M1I14M1D85M 91/142 64.1% 143/94230402 0.0% 2/142 1.4% 20997119 NA +3692 chr4 + 190214555 77097080 77097079 77097153 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx:x...x.x...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 1063876 NA +3018 chr4 + 190214555 77126537 77126536 77126577 41 TCTTTTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 6554016 6554015 6554056 6554016 6554015 6554056 41 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT .:.x..x..:...............:............... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 70572521 NA +3009 chr4 + 190214555 77126539 77126538 77126579 41 TTTTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 6554016 6554015 6554056 6554016 6554015 6554056 41 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ...x:.x................:.:............... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 70572523 NA +3171 chr4 + 190214555 77126539 77126538 77126578 40 TTTTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847278 45847277 45847317 45847278 45847277 45847317 40 TTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..x:.....x.............................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 31279261 NA +3059 chr4 + 190214555 77126540 77126539 77126609 70 TTTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTTGCTCTGT chr4 + 94230402 15335378 15335377 15335447 15335378 15335377 15335447 70 TCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTTATTACTGATGCCTTTTCTGT .:........::...:::......:.x.x:.......x...x...x....:x...x..xx.:.x:..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 61791162 NA +3038 chr4 + 190214555 77126560 77126559 77126606 47 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTTGCTC chr4 + 94230402 52752938 52752937 52752984 52752938 52752937 52752984 47 CTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATTAGTC .......:::....:...............:.......:.x..:x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 24373622 NA +3729 chr4 + 190214555 77135019 77135018 77135158 140 GCTCAATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTGTATATATGTGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATTAGCTGGTCTCAAACTCCT chr4 + 94230402 89812941 89812940 89813071 89812941 89812940 89813071 131 GCTCAGTTTATATGTTAGTGTTTGTG-----GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAA----ATCTCAAGTTTTT .....:.x.......xx:...x.:..-----.:....:x...x:...:.......x.:x..::x.xx:.:::....:.x::x:x::..:..:...x:x...................:.x.x.----:......::.::. 26M5D92M4D13M 84/131 64.1% 131/94230402 0.0% 9/131 6.9% -12677922 -81552480 +3600 chr4 + 190214555 77135035 77135034 77135139 105 TATGTATATGTATATGTATATGTATATGTATATGTATATGTGTATATATGTGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 5214211 5214210 5214315 5214211 5214210 5214315 105 TGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGT .:..:x:...x::.:.:..x:..:.:..:::.x..:.x..:::.:.:..x.::....:..:..x..:.........:.::x::.........::.::.x..:.:. 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% 71920824 NA +3147 chr4 + 190214555 77135072 77135071 77135137 66 ATGTGTATATATGTGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:....:xx...:.::::x..x.:x.:x..:...........:.........::...:...... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 49809581 NA +3044 chr4 + 190214555 77136726 77136725 77136798 73 TGCGCTGGTAATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCTAGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.xx...:.x...........::........x.xx.x...x::.........x::..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 1103521 NA +3615 chr4 + 190214555 77150560 77150559 77150642 83 CGTGGTGGTGCACACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--.:..:.:...........::........x.xx.x...x.x...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 1117363 NA +3219 chr4 + 190214555 77222153 77222152 77222220 68 GCGTACTCCCAGCTACTTGGGAGGCTGAGGCCTGAGAATTGCTTGATCCTGGGAAGTTGAGGTTACAG chr4 + 94230402 76033210 76033209 76033277 76033210 76033209 76033277 68 GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x.:...........::........x....x...x::.....x..::.:.:x..x:..:.::.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 1188943 NA +3157 chr4 + 190214555 77308165 77308164 77308238 74 GTGCACCTGCATTCCCAGCTATTTGGGAGGCTGAGGGATGAGAATTGCTTAAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..:.x.:.......:...::........xxx..x...x::...:....::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 1274961 NA +5365 chr4 + 190214555 77394954 77394953 77395243 290 GGTCTCCTATACCTTTTTGTTTTTTCAACATGTGTTGTAATGTT---TGGGCCCACTCTATAATGCCTTGCCCTCTAGGATTATAAGGAATTCCTGTTTTGTGAGTTATAGCCCAAAGCTGTAGGAAATTTTGAAAAGCATGACTAGTATAAGTGGGTCCATTGTCAGTTTTTAATTGTTTAGGGATTCCCATATGAGCAAA-TAACA------ATGTCACTGTGCATGCAT-----------CTGTTTGGCATGTAGCATGCAGCATATGAGAATAAGTGTCTATAGTCACATGAACATAGCTAAGTTTG chr4 + 94230402 19065303 19065302 19065613 19065303 19065302 19065613 311 GGTCTCTTACATCAGCACGCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTACCAATCTAAAGCTG ......:..:.:.xx:x:.:..:.:...xxxx:x..x.......---.xx...:::....:x..xx::..x...x.:..xxx:.xx:.:..x..:..x:....xx...:xx....x:x:..:..:..x.:::x..:xx:.:.......:..:.:x..x........x.......x....xxx..x..x......xxx.....-:....------...:.x:.x.:.......-----------.x.x...:xxx..:..x::..xx.x....xx...x..:.......x...:..x..xx.x....:x:.. 44M3I155M1I5M6I18M11I68M 178/290 61.4% 311/94230402 0.0% 21/290 7.2% 58329651 NA +3096 chr4 + 190214555 77421497 77421496 77421566 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 1388300 NA +3087 chr4 + 190214555 77480349 77480348 77480418 70 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:.........::::........x.xx.x...xx:.x.........:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 1447152 NA +3215 chr4 + 190214555 77480472 77480471 77480540 69 GAGCAAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAAAGTTACACCATCACCAT-CAGCTTCC chr4 + 94230402 88382714 88382713 88382783 88382714 88382713 88382783 70 GAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACAGCTCCC .........xx.:.........::.:..........:...:x.x..xx:...x..x....:-.....:.. 61M1I8M 52/69 75.4% 70/94230402 0.0% 1/69 1.4% -10902242 -83328160 +3075 chr4 + 190214555 77574141 77574140 77574195 55 TTATGCTTTTTCTCTTCTTGGCTCTTGTTTTTTGTTGTTTGTTTGTTTTTCTTTT chr4 + 94230402 43232276 43232275 43232330 43232276 43232275 43232330 55 TTTTGCATCTTCTGTTTTTGGTCGTTGTTTTTTTTTGTTTATTTGTTTGTTTTTT ..x...x.:....x..:....::x.........x......:.......x.:.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 34341865 NA +3494 chr4 + 190214555 77611819 77611818 77611889 71 CAAACATTTTACTTAATTA------TGAGCAATTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 + 94230402 64884849 64884848 64884923 64884849 64884848 64884923 75 CAAATACTTTAC--AGTTAGAGACTTAAGCAATTTCTTCTTCTTCTTCTTTTTTCTGTTTTCTTCTCGTAAGTCAAA ....:.:.....--.:...------.:...........................:.x....:..:.:x.:..x..:. 12M2D5M6I52M 56/69 81.2% 75/94230402 0.0% 8/69 11.6% 12726970 NA +3326 chr4 + 190214555 77613008 77613007 77613097 90 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGAGGGAGGCTTGCTTGAGCCCAGGAGGTCAAGGCTGCAGCTACTAAATGACAAGC chr4 + 94230402 76033204 76033203 76033292 76033204 76033203 76033292 89 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA-ACATGATGCCAAGC ......x......:.........::::........xxxx.x.:xx::.....:.....:..x.:x:.....:..x-..xx:...x..... 75M1D14M 61/89 68.5% 89/94230402 0.0% 1/89 1.1% 1579804 NA +3427 chr4 + 190214555 77617519 77617518 77617585 67 GTTGTTTGGAATATTTAGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATACGGAGTCTCT chr4 + 94230402 24097403 24097402 24097469 24097403 24097402 24097469 67 GCTGTATTGACTATTCAGGACTTATTCCTTTTTTTTTTTTTTTCTTCCTTCCTGATGTTGAATCCCT .:...x.x..x....:....:..x..::...............:..::..::....::x..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 53520116 NA +3139 chr4 + 190214555 77621285 77621284 77621326 42 TAAGCTTAGGTTTTGTTTTGTTTTGTTTTTTTTTTTTTAAGT chr4 + 94230402 90316280 90316279 90316321 90316280 90316279 90316321 42 TAAACTTAGGTTTGGTTTTGTTTTTTTTTTTTTTTTTTCAGT ...:.........x..........x.............x... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -12694995 -81535407 +3418 chr4 + 190214555 77661049 77661048 77661124 76 TAGGCAAGTCTCTTAACATCTCTGTACCTCAGCTTTCCAATCTGTAAAATGAGTGTGATAAGAGT--ACTACCTCATA chr4 + 94230402 83501146 83501145 83501223 83501146 83501145 83501223 78 TGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACA .:.....:.:x......x.x.x...:......:.....x.:..........::xx.....:x.:.--x........:. 65M2I11M 56/76 73.7% 78/94230402 0.0% 2/76 2.6% -5840097 -88390305 +3802 chr4 + 190214555 77675044 77675043 77675126 83 GTGCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033204 76033203 76033291 76033204 76033203 76033291 88 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ......x......:...........:.........x.xx.x...x.:........::.:..x:xx:..:..:.----....-...... 73M4I4M1I6M 64/83 77.1% 88/94230402 0.0% 5/83 6.0% 1641840 NA +3324 chr4 + 190214555 77714406 77714405 77714480 75 TATAGAGAGAAAAAGTACATACACACTCTCTTTAAAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAGCCCT chr4 + 94230402 5486783 5486782 5486860 5486783 5486782 5486860 78 TACAGGAGGAAAAAATGCTAGCTAGCTCTCTTTAAAAAAAAAAAAACACAAAAAACCCAACAACAAAAAGAATGTCCT ..:..:::......:.:.xx:.xx:.....................x.x......---..x..x.....:..x.:... 55M3I20M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% 72227623 NA +3068 chr4 + 190214555 77714427 77714426 77714499 73 CACACTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCTCCATACTTCCCCACTCCAG chr4 + 94230402 26083759 26083758 26083831 26083759 26083758 26083831 73 CATACTTCCTTAAAAAACAAAACAAAACCAAAAAAAAGATAGAGAAAAGGGTTCCAACACTTCACTACACTAG ..:...::...x.....x....x....xx........:.x.:.:....:.x:::.x.:.....x.:..x.:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 51630668 NA +3229 chr4 + 190214555 77724210 77724209 77724292 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTCAACAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGGGTGAAGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:.........::.x........x:xx.x.:.x::.....:.....:..xx.x::....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 1691013 NA +3046 chr4 + 190214555 77758022 77758021 77758089 68 AACCAAATGTTACAAAGAATGCAGAATACCTTGAACTCTTCTACTTCAATTCAATTACTGGTAAATGG chr4 + 94230402 26739936 26739935 26740003 26739936 26739935 26740003 68 AACAAAATGTGAGAAAGAATATAGATTTCTTTGAACTCTTCTATATCAATTTACTGTTTGCAAACTGG ...x......x.x.......::...x.x.:.............:x......:.x.xx:..xx..x... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 51018086 NA +3180 chr4 + 190214555 77779835 77779834 77779893 59 GCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:............:........x.xx.x...xx:.x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 1746629 NA +3380 chr4 + 190214555 77792596 77792595 77792668 73 TGCTCCTGTAATTCCAGCTAACTGAGGGGCTGAGACAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x....:.........x:...::.......x.xx.x...x.:...........:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 1759391 NA +3317 chr4 + 190214555 77808331 77808330 77808404 74 GTGCGCCTGTAATCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:......x..:.::........x.xx.x...x.:........::.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 1775127 NA +3104 chr4 + 190214555 77811423 77811422 77811489 67 TGTAGTCCCAGCTTCTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:......x..::.:........x.xx.x...x..........::.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 1778212 NA +3473 chr4 + 190214555 77832174 77832173 77832239 66 GTGGTGCGTGTCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......::..--:..:.:...........::........x.xx.x...x...........:.:.. 11M2D53M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 1798973 NA +3326 chr4 + 190214555 77852248 77852247 77852351 104 GAGAATTCATATTTTTCCTTAGGAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------------ACAATCTAATAG---TTATCCACTAGACAACTGAA chr4 + 94230402 37981893 37981892 37982011 37981893 37981892 37982011 119 GAGAATTGGTATTCTATCTTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTGCTTTCAAACAGTGACAATCTAAAAGTGTTTATTCACACTACAAAAGAA .......x:....:.x:...x.xx..x.x.x...xxx...x.....:...............x...x.x..:------------.........x..---....:...xxx....xx... 72M12I12M3I20M 77/104 74.0% 119/94230402 0.0% 15/104 14.4% 39870355 NA +3052 chr4 + 190214555 77852274 77852273 77852331 58 TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAATCTAATAG chr4 + 94230402 65759991 65759990 65760048 65759991 65759990 65760048 58 TTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAATAG .....x..:...:........::.:::...x.....:.:::.:.....x.::...... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 12092283 NA +3384 chr4 + 190214555 77878739 77878738 77878808 70 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:.........:.::........x.xx.x...x.:........::.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 1845542 NA +3069 chr4 + 190214555 77897779 77897778 77897848 70 ATCAGAAGTTTTGGTTATATAAGGGAAAATAACCAAAACGGAGAATTTTTGCAAGGTAATGAATTTGAAA chr4 + 94230402 76681357 76681356 76681426 76681357 76681356 76681426 70 ATCAGCATTGTTGGTAATATGAAGGAAAACAGTAAAAACATAGAGTGATTAGAAGGAAATAAATTTTAAA .....x.x.x.....x....:.:......:.::x.....:x...:.xx..:x....x...:.....x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 1216422 NA +3213 chr4 + 190214555 77904430 77904429 77904483 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x..........::.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 1871219 NA +3283 chr4 + 190214555 77905356 77905355 77905439 84 ATATGGTGGCGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCCTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::....:....:--....:.:...........::........x.xx.x...x::.:......::.:..x:xx:..:..:.. 15M2D67M 55/82 67.1% 82/94230402 0.0% 2/82 2.4% 1872160 NA +3047 chr4 + 190214555 77907863 77907862 77907908 46 CTCTCATGCCAGTTTCTTTCTTTTCTTTTCTTTTTTTTTTTTTTTG chr4 + 94230402 17260891 17260890 17260936 17260891 17260890 17260936 46 CTCTCATGCCAGCTTCTTTTTTCTTTTTTTTTTTTCCCCTTTTCTG ............:......:..:.:....:.....::::....:.. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 60646972 NA +3213 chr4 + 190214555 77907866 77907865 77907924 59 TCATGCCAGTTTCTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTC chr4 + 94230402 52752926 52752925 52752984 52752926 52752925 52752984 59 TCATACCACAGCCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATTAGTC ....:...xxx:....:..::.....................:.x.....:.x..:x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 25154940 NA +3604 chr4 + 190214555 77917916 77917915 77917997 82 CATGGTGGTGCATGCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGTGAACTGCTTTAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG-TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.-......:........:..::........x.xx.....x::...x....::.:..x:xx:..:..:.. 14M1D67M 57/81 70.4% 81/94230402 0.0% 1/81 1.2% 1884719 NA +3722 chr4 + 190214555 77923796 77923795 77923881 86 ACGTGGTGGTATGCACTTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAACTGCTTGAACCTGGGAGATGGAAGCAGGAGAA chr4 + 94230402 76033196 76033195 76033279 76033196 76033195 76033279 84 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA ..:::.....--....x......:...........:.........x.xx.x...x::........::.:..x.xx::..x.x.... 10M2D74M 61/84 72.6% 84/94230402 0.0% 2/84 2.4% 1890600 NA +3564 chr4 + 190214555 77935791 77935790 77935874 84 ACATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATCACTTGAACCTGCGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.........:--......:.........:.::.....:..x.xx.x...x..........::x:..x:xx:..:..:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 1902595 NA +3349 chr4 + 190214555 77941125 77941124 77941194 70 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....::..:.--....:.:...........::...:....x.xx.x...x...........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 1907928 NA +3578 chr4 + 190214555 78000722 78000721 78000800 79 GTGGTGCACACCAGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........::--.....:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 11M2D66M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 1967521 NA +3394 chr4 + 190214555 78043665 78043664 78043830 166 AAATGTGTATCACTTAAAAAATTAATTAGGCCTGGTACATTTTTCTC-TTTCTTTCTCTTTCTTTCTTTCTTTTCTTTCTTCCTTCCTTCCTTCCT-TCCTTCCTTCCTTCCTTCCTTCCTTC--------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176241 50176240 50176414 50176241 50176240 50176414 174 AAAGGTTTGTTTCTGGCAAGATGGATT--TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...x..x.:.:x..x:x..:..x:...--x:...x:x..:.x:....-......:..:.x..:x:.:x::...x.x..x...:...:x.:...:x.-.:.x.::..x::.:...:...:....--------.:.:.::x:......x::.:...::.........::.:.x..... 27M2D18M1I48M1I26M8I45M 100/164 61.0% 174/94230402 0.0% 12/164 7.3% 27867424 NA +3097 chr4 + 190214555 78043775 78043774 78043831 57 TTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 86518998 86518997 86519054 86518998 86518997 86519054 57 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ...:.:...:...:....x:..:xx..:.......:...:...........x::... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -8475223 -85755179 +3027 chr4 + 190214555 78043809 78043808 78043862 54 TCTTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCTCTCTC chr4 + 94230402 66421027 66421026 66421080 66421027 66421026 66421080 54 TTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTC .:....:.......:....:.x......::...x.:..:x....:.:..:.... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 11622782 NA +3585 chr4 + 190214555 78065015 78065014 78065105 91 ATGTGTCTATATTTTTTTTAAGTTAAGATTTCAGTTTTATAGTGTATAT--------ATATATATATATATATATATACATACACACACACACACTAAA chr4 + 94230402 85078453 85078452 85078551 85078453 85078452 85078551 99 ATGTGATTTTGCGTCTGTAAAGTTAAGAATTCACCATTAAAGGACTTTTCACTCCTAATATATACAGATATCTATATATACACACACACACACACTAAA .....x:.x.::x.:.x.x.........x....x:x...x..x::x.x.--------.......:.x....x......:.:.................. 49M8I42M 67/91 73.6% 99/94230402 0.0% 8/91 8.8% -7013438 -87216964 +3189 chr4 + 190214555 78070215 78070214 78070289 75 TACTATATATGTTTATATATGTGTATATATGTATATAAGTGTATATATATATATATATATACCTCCCCCCACTTT chr4 + 94230402 6200760 6200759 6200834 6200760 6200759 6200834 75 TGCTATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCTGTCCACAACTT .:....x.x...x:............x.......:.xx......x.x:.:.:...x.....x..x:..x..x:.. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 71869455 NA +3187 chr4 + 190214555 78091597 78091596 78091668 72 TTATATACATACATACACACGTGTGTTTGTGTGTGTGTGTGTGTGTGTGAATCTATATATATATTTTGGAGA chr4 + 94230402 55694453 55694452 55694516 55694453 55694452 55694516 64 TTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTG--------TATATATTGTTGAGA ..:...:............:......x.....:.x:x::...::.....--------........x.x.... 49M8D15M 50/64 78.1% 64/94230402 0.0% 8/64 12.5% 22397144 NA +3311 chr4 + 190214555 78127644 78127643 78127763 120 CAAACAAACAAACAAACAACAACAACAACAACAAAATGGAACACAGGAAGAGGATCGTTTAGAGGAAGGATGATGAAGTAAGTTTTTTTTATTTATTTATTTTTTTAATTTTATTATTAT chr4 + 94230402 76741965 76741964 76742071 76741965 76741964 76742071 107 CAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACAAACAGAACTGCT---------GCT--TGAATTAGCATAGCTTTATTTGTT--TCTTTTTAATAATATAATGAT ................x..:................x:::x..x.x:..x..:.::.:.---------.x.--....x..:xx.xx:.......:..--.:........xx...x..x.. 59M9D3M2D24M2D21M 78/107 72.9% 107/94230402 0.0% 13/107 12.1% 1385679 NA +3473 chr4 + 190214555 78159741 78159740 78159823 83 CATGGTGGTATGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--.::.x.:..:.:...........::........x.xx.x...x...........:.:..x:xx:..:...:. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 2126544 NA +3229 chr4 + 190214555 78161730 78161729 78161790 61 AAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 76607301 76607300 76607361 76607301 76607300 76607361 61 AAACCTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAA ...x.....:........x....x.:...........:.:::..:.::.xx:.....:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 1554429 NA +3116 chr4 + 190214555 78218071 78218070 78218112 42 TCCCTTCTCTCTCTCTCTCACTCTCTCTCACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.:.............x.....x.x.............. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 2970024 NA +3108 chr4 + 190214555 78218074 78218073 78218114 41 CTTCTCTCTCTCTCTCACTCTCTCTCACACACACACACACA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:.::...........x.......x................ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 2970026 NA +3413 chr4 + 190214555 78218075 78218074 78218116 42 TTCTCTCTCTCTCTCACTCTCTCTCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::.........x.......................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 2970028 NA +3139 chr4 + 190214555 78218079 78218078 78218118 40 CTCTCTCTCTCACTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.......x.........x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 2970030 NA +3102 chr4 + 190214555 78218081 78218080 78218116 36 CTCTCTCTCACTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........x...............:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 65616777 NA +3564 chr4 + 190214555 78258200 78258199 78258283 84 ACATGATGGTTCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:::....x..:.--......:...........::........x:xx.x.:.x.x.....:..::.:..x..x:.....:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 2225004 NA +3674 chr4 + 190214555 78297975 78297974 78298055 81 TATGGGAAGATGGGTATGTTAAT-TTGTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTA chr4 + 94230402 81889405 81889404 81889486 81889405 81889404 81889486 82 TAAGAAAATATAGGTATACTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACATTA ..x.::..x..:.....::.x..-..:x..x..:......:.:x......:......:......x.x...:...:..:.... 23M1I58M 59/81 72.8% 82/94230402 0.0% 1/81 1.2% -3591430 -90638972 +5058 chr4 + 190214555 78297998 78297997 78298223 226 TTGTTCCTC-TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTACTAATCCTCTTTATATATATATATTTTAAGGTATATGACATGATATTATAAGGTATGTGTATATATATTTAAGGTATATAACATATTATAAGGTGCATATATATATACCTTATATAAAATATAAAATATA-AGGTACAGATATATACTTAGCCTTATAAAATATAAGGT chr4 + 94230402 4618352 4618351 4618563 4618352 4618351 4618563 212 TTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA---------------GTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTT-ATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatataAAAGAATGT ....x...:-.......::..............x:x...::......x.x......---------------:....x.......x..x:x......x::.:x..x..xx.x.x.x:.:x...x:x....-.xx...::xx.:....x..xx:.::..........::x...x..x.x.....x....:.-.x:....x.......:x.:xx:x....x..x.x..x.. 9M1I46M15D58M1D59M1I38M 141/210 67.1% 212/94230402 0.0% 18/210 8.6% 73679646 NA +4019 chr4 + 190214555 78298005 78298004 78298174 170 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATTACTAATCCTCTTTATATA-TATATATTTTA------------AGGTATATGA-------------CATGATATTATAAGGTATGTGTATATATATTTAAG-----GTATATAACATATTATAAGGTGCATATATATATACCT---TATATAAAA chr4 + 94230402 4618362 4618361 4618557 4618362 4618361 4618557 196 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATA-----TATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacat----atatacatatatatatatgtatgtatataAAA .......::..............x:....::......x.x......-...x:x..-----:x.......-.....:..x..------------..:..x..:.-------------.x.x:....x..xx:...:.:.......:.x.x..-----:....:..:.:..----.x:.:............:x.---......... 46M1I8M5D9M1I11M12I10M13I35M5I13M4D20M3I9M 122/161 75.8% 196/94230402 0.0% 44/161 27.3% 73679643 NA +3033 chr4 + 190214555 78298007 78298006 78298082 76 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTACTAATCCTCTTTATATATATATATTTT chr4 + 94230402 60831530 60831529 60831605 60831530 60831529 60831605 76 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCT ...x.....x.............x.:.......:.:....:.:.:.:xxx:.x.:..xxx..:..x.....:x.:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 17466477 NA +3252 chr4 + 190214555 78298009 78298008 78298125 117 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTACTAATCCTCTTTATATATATATATTTTAAGGTATATGACATGATATTATAAGGTATGTGTATATATATTT chr4 + 94230402 60831530 60831529 60831627 60831530 60831529 60831627 98 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT-----GGTCTGTGC--------------GCATGTGTGTATATTTCT ...x.....x.............:.:.......:.:....:.:.:xxx:.xx.:...xx...:..x.....-----...x.:..x--------------.:......:.....x.:. 71M5D9M14D18M 71/98 72.4% 98/94230402 0.0% 19/98 19.4% 17466479 NA +3037 chr4 + 190214555 78312809 78312808 78312877 69 GTGACAGAGTGAGACCCTGTCTGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAG chr4 + 94230402 73002023 73002022 73002091 73002023 73002022 73002091 69 GTAAAATACTGATATTCTGTCTTGGAGACAAATGAAAAAATGAAGGAGGAAAAAGAGAGAGAAAGAAAG ..:.x.x.x...x.::......x::...x.:.x:..:...x:...:.:....:.........:...:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 5310786 NA +3048 chr4 + 190214555 78320610 78320609 78320691 82 AAGGAGAAAATAGAAAGAGAAAGCATAACTTCTCTCTCCCTCCCTCCTT--CTGTCTCTCT---CTCTCTCT---CTCTCCCGCATTTTA chr4 + 94230402 30106699 30106698 30106788 30106699 30106698 30106788 90 AAGGAACTAAAAAAAAAAAAAAGCATAATTTTCCACTCCCTCACTCCTTGCTTGTCTCTCTGACCTGTCCCTGAGCTTCTCTGCTTTTCA .....:xx..x.:...:.:.........:..::.x.......x......--:.........---..x..:..---..:::.:..x...:. 49M2I10M3I8M3I15M 61/82 74.4% 90/94230402 0.0% 8/82 9.8% 48213911 NA +3006 chr4 + 190214555 78347758 78347757 78347819 62 TGTGTGTATGTGTGTGCGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTGGTCATCCCTTCCT chr4 + 94230402 41434315 41434314 41434376 41434315 41434314 41434376 62 TGTCTGGGTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCTTTT ...x..x:.:.x....:......:..........:.:.:.......x.x..::.::.:.::. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 36913443 NA +3557 chr4 + 190214555 78382268 78382267 78382358 91 AAAATAAGGCATTATTTAATAAAATAAAATAATTTTTAAAAATGATAAATAATGTATTTTAT-TTATAATGCTGTATTTTATTTATAATGCT chr4 + 94230402 10518746 10518745 10518837 10518746 10518745 10518837 92 AAAATAAGGCAATAATTAATTAGATAAATCACTTTTCCATACTGATAAATAATCTATTTTGTGTTTTGTTGCAGTGAATTATTAGCTATGCT ...........x..x.....x.:.....x:.x....:x.x.x...........x......:.-..x.:x...x..:xx.....x::x..... 62M1I29M 67/91 73.6% 92/94230402 0.0% 1/91 1.1% 67863522 NA +3032 chr4 + 190214555 78411014 78411013 78411080 67 ATTTCAAACTTTAAACAAATCCTTTTCTAATAATTCTTTTCCTTTTTTCTTTTTTTTCTTTAAAGCA chr4 + 94230402 28615128 28615127 28615194 28615128 28615127 28615194 67 ATCTTATACTCTAATCAAATTAGAAATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTTAAGCA ..:.:.x...:...x.....:xxxxx::....x.........:...:.:........:...x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 49795886 NA +3881 chr4 + 190214555 78443217 78443216 78443300 84 ACGTGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCAGTTGAGCCCAGGAATTTGAGGCTGTGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....::..:.--......:...........::........x.xx.x.:.x..x....:.....:.::..x:......:. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 2410021 NA +3454 chr4 + 190214555 78486801 78486800 78486878 78 TCCACTGCCTTTTCTCTTTCTCTCTCTCTATTTTTTTTTTTTTTTTTTTTG--------GCAGACAGGGATAGAAGTGAGAGTGAA chr4 + 94230402 17384395 17384394 17384480 17384395 17384394 17384480 86 TCCACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAGAAGAAACGGACTATGATTACAGTGGAAGTGAA .......x.x...x.:xx...........x.:.:.................--------:.:...x:x...x:x....::...... 51M8I27M 59/78 75.6% 86/94230402 0.0% 8/78 10.3% 61102406 NA +3375 chr4 + 190214555 78488006 78488005 78488075 70 ACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATTGCTTGAACCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......:...........::........x.xx.x:..x::.........:.:..x.xx:..:..:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 2454798 NA +3038 chr4 + 190214555 78498376 78498375 78498448 73 TGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCGCTCAAACCCAGGAGGTGGAAGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........::::........x:xx.x...x.:..::.......:..x.xx::.:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 2465171 NA +3795 chr4 + 190214555 78514937 78514936 78515010 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 2481733 NA +3098 chr4 + 190214555 78537816 78537815 78537888 73 TGCACTTGTAGTCACAGCTACTTGGGAGGCTGAGGTGAGAAAATCACTTGAGACTGGGAGGTCAAGGATGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:x..........::........x:xx.x:..x.......:x.::.:..x.:x:..x..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 2504611 NA +3079 chr4 + 190214555 78543782 78543781 78543849 68 AAGCTCTGCTTTCAATTTCTCTGATTTGCTCACTAATGCCTTGTGTGTGTTTTACTAACCTTTTATAT chr4 + 94230402 81402333 81402332 81402400 81402333 81402332 81402400 68 AAACTGAATTTTCCATTTCTTTCACATGCACATTAATGCCTTGTGAGTGTTTTATTATGCATCCATAT ..:..xx::....x......:.x.:x...x..:............x........:..xx.x.::.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -2858551 -91371851 +3578 chr4 + 190214555 78583484 78583483 78583565 82 CATGGTGGCTCATGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGAATCACTTAAGCCCAGCAGGTCTAGGCTACA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::....:x..:.--......:.......:...::........x:xx.x...x.....:.:.....x..x.:.:....::. 14M2D66M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 2550287 NA +3601 chr4 + 190214555 78587965 78587964 78588056 92 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTACAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.........::::........x.xx.x...x::...........:..x:xx:..:.::..------:.x...:..... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 2554761 NA +3576 chr4 + 190214555 78648185 78648184 78648286 102 ATTTCTTCTTTCTTTTCTTTTCTTTTCTTTTCCTTTC---TTTTCTTTTCTGTTTCTTTTCTTTTTTCTTCTTTCTTTCTCCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792748 85792747 85792852 85792748 85792747 85792852 105 ACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT .:.......:...x:::.....:.x.x:x.x::....---.......:..x:x...x.....:.x:...x.:.:x..xx........:...:.:.:....:.::. 37M3I65M 67/102 65.7% 105/94230402 0.0% 3/102 2.9% -7144563 -87085839 +3464 chr4 + 190214555 78648191 78648190 78648315 125 TCTTTCTTTTCTTTTCTTTTCTTTTCCTTTCTTTTCTTTTCTGTTTCTTTTCTTTTTTCTTCTTTCTTTCTCCCTTCCTTCCTTCCT-TCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCC chr4 + 94230402 89201217 89201216 89201338 89201217 89201216 89201338 122 TCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAA----GCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTCTCC ..x.x.....xx:.x:..............:...:....xx----x..x.x.....:.:x.:xx:..:........::..::...x.-:...........x:..:.x:.:xx.x::..x.::.... 41M4D42M1I38M 79/121 65.3% 122/94230402 0.0% 5/121 4.1% -10553026 -83677376 +3410 chr4 + 190214555 78648195 78648194 78648303 109 TCTTTTCTTTTCTTTTCTTTTCCTTTCTTTTCTTTTCTGTTTCTTTTCTTTTTTCTTCTT---TCTTTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCC chr4 + 94230402 85792741 85792740 85792849 85792741 85792740 85792849 109 TCGTTTCACTTCTTCTCTCTGCCTTT---TTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCC ..x....x:.....:...:.x.....---...:.x.x::.x.:...:x.x.........:---.::x.:..:..x.::.x.:..x..xx.:......:...:.:.:...... 26M3D31M3I49M 71/106 67.0% 109/94230402 0.0% 6/106 5.7% -7144546 -87085856 +3271 chr4 + 190214555 78648208 78648207 78648277 70 TTTCTTTTCCTTTCTTTTCTTTT---CTGTTTCTTTTCTTTTTTCTTCTTTCTTTCTCCCTTCCTTCCTTCCT chr4 + 94230402 49829835 49829834 49829907 49829835 49829834 49829907 73 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT ..:.x...:..x.xx:..x....---.::.......::..............:.....:.::..::...:... 23M3I47M 51/70 72.9% 73/94230402 0.0% 3/70 4.3% 28818373 NA +3307 chr4 + 190214555 78648233 78648232 78648314 82 GTTTCTTTTCTTTTTTCTTCTTTCTTTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTC chr4 + 94230402 57538429 57538428 57538510 57538429 57538428 57538510 82 GTCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ..:....:.xx...x.:x::...::....:.x:...:........:.:x.:x..:::..:.:.:..x:...........::. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 21109804 NA +11599 chr4 + 190214555 78652460 78652459 78652707 248 CATGTGAAGGGCTTT-GTTTAAGGAAATGCTATGTTGCCAGCACAG--TCACTTGTCAAAGACAATAGCTGTTGGCAAAGCATTAATATGTGAGGATTGGGAGAGCTGCCAGTGGAAGCAAACTGTTTTGTGGTGTGTACAATGTTGTGCTGGGACATCAGCTGAAGTTCACCATTGATGACCATCTGAAAACTGCCTTCCACTCACAGTACACTCAAATGGACAACTCAGC-AAATTGAAGAATGAATTTC chr4 + 94230402 46282281 46282280 46282530 46282281 46282280 46282530 250 CATGGGAAGATTTTTTGTTGCAGTGGATCCTGTTCTGCCTGCGCAGAGTCACTTGTCAAGGACAATGGCTGTTGGCAGAGCATTAATATGACAGAATTGGGCGTGCTGCCAAGGAAAGCAAACTCTTTTGTGGTTCATGCAATGTTTTGCTCACCCGTCAGCTTGAGATCACCACTGATGGCCATCTGAAAACTGCCTTTCACCAGCAGTGGAAC--AACCGTCCACTCAGCAAAAATGGATAATGGACTTC ....x....:x:...-...xx..x::..x..:.x:....x..:...--...........:......:..........:............xx..:......x.x.......:x.:.........x.........x::.:.......x....x:xx.:......x:..x......:.....:..................:...:x:....:x.x:--..:x.x.x.......-...x..:.x....:.:... 15M1I30M2I167M2D15M1I19M 187/246 76.0% 250/94230402 0.0% 6/246 2.4% 32370179 NA +3600 chr4 + 190214555 78655512 78655511 78655612 101 CATATTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTCACGAGAATTGCTGGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x.....x:..--....:.:...........::........:.x:.x...x::..x........:..x:xx:..:..:..------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 2622315 NA +3726 chr4 + 190214555 78671518 78671517 78671600 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCGAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:...........::........x.xx:x...x..........x..:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 2638321 NA +3659 chr4 + 190214555 78685669 78685668 78685747 79 GTGGTGCACGTCTGTGGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGGATTGCTTGGGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...........--..:..:.........::.:........x:xx.x.:.x::....::.....:..x..x:.....:.. 11M2D66M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 2652468 NA +3210 chr4 + 190214555 78708720 78708719 78708780 61 ACACACACACACACACACACACACACATATATATACACATATATACATATATACATATATA chr4 + 94230402 74526066 74526065 74526126 74526066 74526065 74526126 61 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ....xx.x.:x..............::x.:...:...x........:......::...x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 4182654 NA +3059 chr4 + 190214555 78708722 78708721 78708792 71 ACACACACACACACACACACACACATATATATACACATATATACATATATACATATATACACATATATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .......:.:x....::..x......::...:.x.x....:..:..x.:.:::.:....::...::.::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 56108524 NA +3142 chr4 + 190214555 78708722 78708721 78708779 58 ACACACACACACACACACACACACATATATATACACATATATACATATATACATATAT chr4 + 94230402 74526066 74526065 74526123 74526066 74526065 74526123 58 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ....xx.x.:x...............:x.:.......x.....:.::....:..:... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 4182656 NA +3891 chr4 + 190214555 78708765 78708764 78708847 83 CATATATACATATATACACATATATATACATATATACACACACACACACACACACATATATA---TATATATATATATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ...:.:.::..::.:......x...:x......:........:...........x:x.x.x.---..:..:x...x.......... 62M3I21M 62/83 74.7% 86/94230402 0.0% 3/83 3.6% 55461044 NA +3074 chr4 + 190214555 78708773 78708772 78708834 62 CATATATACACATATATATACATATATACACACACACACACACACACATATATATATATATA chr4 + 94230402 61270774 61270773 61270835 61270774 61270773 61270835 62 CATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...:x...:.:x.:......::.......:...::.....x....x...:....x:..:.:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 17437999 NA +3155 chr4 + 190214555 78708789 78708788 78708877 89 TATACATATATACACACACACACACACACACATATATATATATATATA--------TATATATATATACACACACACACTTTTTTAAAAAATAAAAT chr4 + 94230402 89823932 89823931 89824027 89823932 89823931 89824027 96 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTAC-CTCAATCCCCATGAGAAAAAATAAAAT ....:..:x....................x:...xx........::..--------.....::x.x...-.x..xx.x.:x.xxx............ 48M8I13M1D27M 66/88 75.0% 96/94230402 0.0% 9/88 10.2% -11115143 -83115259 +3092 chr4 + 190214555 78708791 78708790 78708839 49 TACATATATACACACACACACACACACACATATATATATATATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..:....:x.:..................x....xx........::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -11115141 -83115261 +3300 chr4 + 190214555 78709021 78709020 78709105 85 CAGGGTGGTGGTCCACACCTGTAGTTCTAGCTACTCCAGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTCCAAGCCTGTA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x:......-----...x........:.......:x.:........x.xx.x.:.x::.....:.....:..:::x:.x..... 10M5D70M 57/80 71.2% 80/94230402 0.0% 5/80 6.2% 2675824 NA +3111 chr4 + 190214555 78727952 78727951 78727989 38 GGGTTTTGTTTTTTTGTTTGTTTGTTTGTTTTTGAAAT chr4 + 94230402 29689848 29689847 29689885 29689848 29689847 29689885 38 GGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAAAT .......x.........................x.... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 49038104 NA +3091 chr4 + 190214555 78732375 78732374 78732453 79 GTGGTGGGCGCCTATAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCCTGAACCCAGAGGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--.:..:.:.:.........::........x.xx.x...x::.:..........:.x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 2699174 NA +3405 chr4 + 190214555 78756130 78756129 78756201 72 GAGTGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATAGAAAAAAAGAAACAATACAGAGG chr4 + 94230402 16379592 16379591 16379663 16379592 16379591 16379663 72 GAGAAGAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAGG ...x:::...:....:.x......x:.....x...:x.:.......:x.....x..:.:..x..:...:... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 62376538 NA +3319 chr4 + 190214555 78756138 78756137 78756193 56 CCCTGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATAGAAAAAAAGAAACAA chr4 + 94230402 55094095 55094094 55094150 55094095 55094094 55094150 56 CCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAACACAA ....x:.x...::.x........................:...xx....:.x.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 23662043 NA +3386 chr4 + 190214555 78760553 78760552 78760680 128 CACTAAATATT---GACCTGCCACAGAAAAATATGG--------GAAGAACCCAAGCATGGTGGTGTGCACCTCTAGTTCTAGCTACTTGGGATGCTGATGTGGGAGGATCACTTGAGTCCAGGTGTTTAAGGTTGTAG chr4 + 94230402 76033141 76033140 76033277 76033141 76033140 76033277 137 CAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x...---......x:x::.:...:....x--------...:::x:x.x:..::......--...x.x......:.........::.x.....xx:xx.x.:.x.......::....:x.:..x:..:..... 11M3I22M8I22M2D71M 84/126 66.7% 137/94230402 0.0% 13/126 10.3% 2727412 NA +8691 chr4 + 190214555 78776446 78776445 78776764 319 GGCCAGGGGCGGCGACCCCTCGCGGACGCCCGGCTGCGCGCCGGGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCTCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAGCGGCGGCGGAGCGGCGGGTGGCGGGGCTGGCGGGGCCGGGGCCGGGGCCGGCTGCGGCTCCGGCGGCTCGTCCGTGGGGGTCCGGGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTACGGGCGCCCGGGGAGGCTCGGACAGGCAGGTGAGGGAGGG chr4 + 94230402 46313928 46313927 46314207 46313928 46313927 46314207 280 GGGCAGAGGCAGCGGGGAGCGGCCGAGGAGCGGCGGCATGTGAAGCGGGCAGCTCCCCATCTCCGGCCGCCT-CGGGGCCCCGCTCGCC---------ATGAAGAAGTTCTCCCGCATGCCCAAGGCCGAGGGGAgcggcggcggcggcggagcgggcggcggagccggaggagcgggcggtgcggccg---------------------ccctggg---ccgggTGTTCGCCGTCGGGCGGCACCAGGTCACCGCCGAGGAGCTGCTGGCAGAGGGTA---ACGCTGGGGCCG--TAGGACGGGCCGGGCTGGGGGGG ..x...:...:...:xxxx:x..x..x.xx....x..::.:x::..x..x::..:x..x.:x.xx..:x...-..xxx:..x.......---------..............:..x.........x.x.....x:..:..........x.x:.....:.....:..:..x..:..x..x.x:.x.....---------------------..x....---............x.....x..x............x:x..:...::......x..:....---:...:x...xx.--.x....:...x..xxx...:... 72M1D16M9D91M21D7M3D59M3D12M2D23M 197/280 70.4% 280/94230402 0.0% 39/280 13.9% 32462518 NA +3567 chr4 + 190214555 78805831 78805830 78805900 70 CACGGTGGCGGGCGTTTGTAGTTCCAGCTAATTGGGAGGCTGAGACAGGAGAATCACTTGAATCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:....:.x:...--.............x...::........x.xx.x...x........:..:.:.. 15M2D53M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 2772634 NA +3528 chr4 + 190214555 78812904 78812903 78812986 83 CATGGTGGTGTGTGCCTGTAGTTCCAGCTATTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCTGGAGGATCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:::.--..............:...::........x:xx.x.:.x.:.....:..::..:.x.:x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 2779707 NA +8370 chr4 + 190214555 78833562 78833561 78833693 132 ATTTTTTTTTTTCTTTCCAGAAAGAGCTATCTGGTCACAAAAATATTGTGGGCTATTTGGACTGTGCTGTTAATTCAATTAGTGATAATGTATGGGAAGTCCTTATCTTAATGGAATATTGTCGAGGTAAGT chr4 + 94230402 46337177 46337176 46337308 46337177 46337176 46337308 132 ATGTGTATTTTCTTTTTCAGAAAGAATTATCTGGGCACAAGAATATCGTGAGCTATTTGGATTGTGCTGTTAACTGTATAAGTGATAACGTCTGGGAGGTCCTCATTCTCATGGAGTACTGTCGAGGTAAGT ..x.x.x....::...:........::.......x.....:.....:...:..........:...........:.xx..x........:..x.....:.....:..::.x.....:..:............. 132M 106/132 80.3% 132/94230402 0.0% 0/132 0.0% 32496385 NA +10290 chr4 + 190214555 78842366 78842365 78842544 179 AAATTACTTTTTTGGTT----AGCTGGACAGGTAGTGAATCAAATGAATAAGAAGCTACAGACGGGTTTTACAGAACCAGAAGTGTTACAGATATTCTGTGATACCTGTGAAGCTGTTGCAAGGTTGCATCAGTGTAAGACTCCAATAATTCACCGGGATCTGAAGGTAAGAACTTTAGAATT chr4 + 94230402 46338785 46338784 46338967 46338785 46338784 46338967 183 AAAGTTCTTTGCTGCTTCTTCAGCTGGGCAAGTTGTGAATCAGATGAATCAGCGCCTGCAGACGGGCTTTACAGAGTCAGAAGTAATGAGAATATTTTGTGATACCTGTGAAGCTGTTGCTCGGCTGCATCAGTGCAAAACTCCTATAGTTCACCGGGATTTGAAGGTACGAACCTGATACTT ...x.x....x:..x..----......:..:..x........:......x..x:x..:........:........::.......:x.:x::.....:.......................xx..:..........:..:.....x...:...........:........x....:.x.x.x.. 17M4I162M 142/179 79.3% 183/94230402 0.0% 4/179 2.2% 32503581 NA +9488 chr4 + 190214555 78844907 78844906 78845055 149 TATTGATTTTCTTTTCTTAAGGTAGAAAATATTTTGTTGAATGATGGTGGGAACTATGTACTTTGTGACTTTGGCAGTGCCACTAATAAATTTCTTAATCCTCAAAAAGATGGAGTTAATGTAGTAGAAGAAGAAATTAAAAAGTAAGT chr4 + 94230402 46339222 46339221 46339367 46339222 46339221 46339367 146 TGTTAACTTCCTTTC---AAGGTGGAGAATATATTGCTAAATGACAGTGGAAATTATGTTCTCTGTGATTTTGGCAGTGCTACAAACAAGTTCCTTAATCCTCAAAAAGATGGTGTTAATGTGGTCGAAGAAGAAATTAAGAAGTAAGT .:..:.:..:....:---.....:..:.....x...:.:.....::....:..:.....x..:.....:...........:..x..:..:..:....................x........:..x..............:........ 15M3D131M 120/146 82.2% 146/94230402 0.0% 3/146 2.1% 32505685 NA +7260 chr4 + 190214555 78847159 78847158 78847283 125 TCCACTCCATTTCACTCATTTACTGCCAGGTATACAACTCTGTCATACAGAGCCCCTGAAATGATCAACCTTTATGGAGGGAAACCCATCACCACCAAGGCTGATATCTGGGTAAGGCCAAGAAA chr4 + 94230402 46340403 46340402 46340525 46340403 46340402 46340525 123 TCTGTTCTCTTGCAATTATGTGCATTTAGGTATACAACACTATCGTACAGAGCTCCTGAAATGATCAATCTTTATGGAGGGAAATCAATTACTACCAAGGCAGATATCTGGGTAAG--CAAAAAA ..:::..:x..x..x.:..x.:.xx::...........x..:..:........:..............:...............:.x..:..:........x..............--...:... 116M2D7M 98/123 79.7% 123/94230402 0.0% 2/123 1.6% 32506756 NA +9670 chr4 + 190214555 78850891 78850890 78851069 179 CTCTAATGATATTTATGCTTCTTTGGTTTACAGGCACTGGGATGTCTACTCTATAAACTTTGTTTCTTCACTCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGATGGCAACTTCACCATCCCAGACAATTCTCGTTACTCCCGTAACATACATTGCTTAATAAGTAAGTATTTGGG chr4 + 94230402 46341142 46341141 46341317 46341142 46341141 46341317 176 CTTTTATGGGGCCTATATTTGTTT---TTACAGGCACTTGGCTGCTTGCTGTATAAGCTTTGTTTCTTTTCACTTCCCTTTGGAGAAAGTCAAGTTGCTATTTGTGATGGAAGTTTTACTATTCCAGACAATTCCCGATACACTCAAAGTATACACTGTTTGATAAGTAAGTATTTGGG ..:.x...:x:::...::..x...---...........x..x..::.:..x.....:...........:x.x.....:.....x..:.....:........:........x.::..:..:..:...........:..x...x.:.:x.::.....:..:..:................. 24M3D152M 134/176 76.1% 176/94230402 0.0% 3/176 1.7% 32509749 NA +9336 chr4 + 190214555 78859560 78859559 78859702 143 TAACATTTTGATCT-----ATTCTTGCAGGGTTCATGCTTGAACCAGATCCGGAACATAGACCTGATATATTTCAAGTGTCATATTTTGCATTTAAATTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAATGTAAGTAGATTTTCA chr4 + 94230402 46345236 46345235 46345383 46345236 46345235 46345383 148 TGACAATTTGATCTTACCAATTTTTGCAGGATATATGCTTGAACCAGATCAAGAACAGAGACCTGATATTTTTCAGGTATCTTACTTTGCCTTTAAACTTGCCAAAAAGGATTGTCCGGTGTCCAATATTAATGTAAGTAGTCTTTCA .:...x........-----...:.......:.x:................x:.....x...........x.....:..:..x..:.....x......:...................:..x.....:..:...........x:..... 14M5I129M 121/143 84.6% 148/94230402 0.0% 5/143 3.5% 32514324 NA +7242 chr4 + 190214555 78861374 78861373 78861477 104 TTTTTTTCTTCCAAGAATTCTTCTATTCCTTCAGCTCTTCCTGAACCGATGACTGCTAGTGAAGCAGCTGCTAGGAAAAGCCAAATAAAAGCCAGGTAGGCAAA chr4 + 94230402 46348025 46348024 46348128 46348025 46348024 46348128 104 TTTATTTTTCCCAAGAATTCTCCTGTCCCTTCAACTCTTCCTGAGCCTATGACAGCCAGTGAGGCAGCTGCTAGAAAAAGCCAAATAAAAGCAAGGTGAGTAGA ...x...:.:...........:..:.:......:..........:..x.....x..:.....:...........:.................x....::.:.:. 104M 86/104 82.7% 104/94230402 0.0% 0/104 0.0% 32513349 NA +10900 chr4 + 190214555 78865548 78865547 78865724 177 CTGTTGTAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGGCCAACTCTGCTACTACTGCCACTCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAAGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGTAA chr4 + 94230402 46349312 46349311 46349485 46349312 46349311 46349485 174 CTGTTTCAGAATAACAGATCCTACTGGACCAACAGAAACCTCAATTGCACCACGACAAAGACCAAAGGCCAATT---CAAGCACTGCTGCTTCAAGTGTTCTGACGATCCAGAGTTCAGCAACACCAGTCAAAGTACAAGTTCCTGGTGTATTTGGTAATCGTGGGCAAAAAGGTAA .....x:............x.:.:............................x...................:.---.x.x:.....::..:.x.....x.....x..:..:..............x..:.....x.xx.:........x...:.....:.:.:.:.x......... 74M3D100M 143/174 82.2% 174/94230402 0.0% 3/174 1.7% 32516236 NA +3719 chr4 + 190214555 78867923 78867922 78868020 98 AGTGGCATATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAGTCACTTGAACCCAGGAGGTGGAGGTTGCAGTAAGCCAAGATCATGCCA chr4 + 94230402 76033200 76033199 76033289 76033200 76033199 76033289 90 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....:::.:.--....:.:...........::........x.x::x..:x.............:..x.xx:..:..:..------..x..x...... 11M2D67M6D12M 66/90 73.3% 90/94230402 0.0% 8/90 8.9% 2834723 NA +10296 chr4 + 190214555 78872606 78872605 78872809 204 TTTTTCAGATGCCGCAGTATCAGCAGGCTTTCTTTCAACAGCAGATGCTAGCTCAACATCAGCCGTCTCAACAACAGGCA---TCACCTGAATATCTTACCTCCCCTCAAGAGTTCTCACCAGCCTTAGTTTCCTACACTTCATCACTTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGCAAGTATTTT chr4 + 94230402 46352100 46352099 46352306 46352100 46352099 46352306 207 TTATTTAGGTGCAGCAATATCAGCAGGCTCTTATACAACAGCAGATGCTTGCTCAGCAACAGCAGCGGTCACAACAGGTGCAGTCTCCTGAATATGTCCCTTCTCTACAAGACTTCTCGCCAGCCTTAATCTCCTACTCTGCATCACTTCCAGTACATGCTGGAACAGTGGCAGATTCTCCCTATGCTGCAAGCAGGCAAGTATTCT ..x..:..:...x...:............:.:x.x..............x.....:..x....x.:xx:x........::---..x.........x.:x.:..:.:x.....x.....:.........:.:......x..x............:x..x.:......x:.::::..:..::.....:x...x.::...........:. 80M3I124M 151/204 74.0% 207/94230402 0.0% 3/204 1.5% 32520506 NA +3342 chr4 + 190214555 78873657 78873656 78873736 80 TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCACATGTGCA chr4 + 94230402 85834531 85834530 85834610 85834531 85834530 85834610 80 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .:.:.x::.x.....x.................:.xx:...:x.::.::..:::.:x..:.....x.:......::.:.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% -6960874 -87269528 +3045 chr4 + 190214555 78873659 78873658 78873728 70 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCA chr4 + 94230402 79265520 79265519 79265589 79265520 79265519 79265589 70 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ............::........xx...:.:.:::.::::.....:::.:...x:...::x.....x::.. 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% -391861 -93838541 +3154 chr4 + 190214555 78873660 78873659 78873730 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCACA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx...:.:.:::.::::.....:.::.:::x.:::..x.....x.... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -391859 -93838543 +3227 chr4 + 190214555 78873662 78873661 78873730 69 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCACA chr4 + 94230402 79265519 79265518 79265587 79265519 79265518 79265587 69 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA .............::........xx...:.:.:::.::::....:::..:...x:...:.x....:x.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -391857 -93838545 +3006 chr4 + 190214555 78873673 78873672 78873723 51 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGT chr4 + 94230402 63659728 63659727 63659778 63659728 63659727 63659778 51 TATGTGTACTTGTGCCTGTGTGTGTGTGTCTGGATGCATGCATACAAATGT .:.....::x....:x.............x..x..........:..x:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 15213945 NA +3250 chr4 + 190214555 78873679 78873678 78873733 55 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCACATGT chr4 + 94230402 85834541 85834540 85834595 85834541 85834540 85834595 55 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .....x.................:.xx...:.x....:...:...:x::...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -6960862 -87269540 +3071 chr4 + 190214555 78873680 78873679 78873729 50 GTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTGTGTGCAC chr4 + 94230402 79265519 79265518 79265568 79265519 79265518 79265568 50 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACAC .............::........xx.:.::..:...:..:.....::... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -391839 -93838563 +27800 chr4 + 190214555 78878640 78878639 78879473 834 AGTATTTATAAAGTATAAAGTAGGGCATTGTAAATTTTTATT-----------TATTTTAATTTTTCTTTCCATCTTCTTTTTTCTTACTCAATTATTACTATAGGTCAG---TTGCTGATAAAGAGGCCATTGCAAATTTCACAAATCAGAAGAACATCAGCAATCCACCTGATATGTCAGGGTGGAATCCTTTTGGAGAGGATAATTTCTCTAAGTTAACAGAAGAGGAACTATTGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATTTTGCTTCACAGTAAA-------ATAACAGCTCTAT----TATTATTCAGCAAGGCCAAAGACTTTTGAGAATGTGTATGGAAAATTCTTTTTGTGCATTTGAGGGCAAAATTCAGGCCATCTTCTTATACATATACTATCAAATTATG---TTGTGTGCATTAGAAATCAGTTGCTTGA---TAGTAGCTATTAAACCCAATATTGCTGATAGTATGCTAATATCCTAAAACTTAAATATTGCATAT----CTATGAATGTTAAA---TTCAGAATATCTCTAAAACATGGAAAATTGATGTTTCAATAAAAAGGGAGACATTTTATTATTTTGCCTTACTAATGATTTTGCAGCTCTGTTTTTCTGCACACTC-AATAGAAAATATTGTGGGTCTGAGATGCCCTTTGAAAATGCCTGAAAGAAAACATGGGCTACTACATTATGTTAATGTTTTGTAATGTCC-TTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATATGGCAAAAATTAAATAAATTCTTTTTCACTTTAAATCAGATATCTCAAT-GTTTTTACTTGGAATCATTGCTTT chr4 + 94230402 46353849 46353848 46354647 46353849 46353848 46354647 799 AGTATTTTGACATAACAAAGCATACCATC---AATTTTTATCCTGACAGACAATCCTGTAATGTTCCTTTCTATTTTCTTTCTGTGGACTGACTT-----CACAGGTCAGGCATTCTTGATGCTGAGGCAATTACCAGTTACCCAACGCAGAA---CATCAATAACCCACCTGATATGTCAGGCTGGAACCCATTTGGAGAGGACAATTTTTCCAAGTTGACAGAGGAGGAGCTGCTGGACAGAGAATTTGACCTGCTAAGATCAAGTAAGGGACACTTGAAGGCTTATTTTGCTTCACAGTAAATAAGGTCTCAGCAGTACCATCACCTGTTTTACTGAAGGGCCA---------TACAGTCTGTGTACAGAATTCTTTCTGAGCATTTGAGGGCAGAGTTGGGCCTGTCTCCTT-------TCCTTTCCCTTTCTGAAAATGTGTGCAATAAGAGATGACCGTCTAAAACTGGTAGCTACTGGCTGAAGTACTGCAGA---AATGGCTCTATCTTGGCTTTTAAATCCTGCTTATGTCACCTTGATTGTTAAAAAGCTCTGACTAGC-----------------------------------AGAGGTATTTGGCTG-CTTGCTTCATT----CCTCTTCAGCTT--TTTTCTTGCACACCAGAACAGAAGATTTTGTGGGTCTGATATGTCCTTTGAAAATGCCTGAAAGAAAA-ATGATCTCTTACATTATGTTAATGTTTTGTAATGTCCTTTTTGATGAGTGGCTACATGTAAGGGCTGCTTTATTGTTCTGATATGGCATTAGTTGAATAAA---CTTTTCTCTTGAAGTCAGTTATCTCAATGGTTTTTACTTGGAGTTACTTTTTT .......xx.x.xx.:....:.x:x...:---.........:-----------.x:.x....x..:.....:..:......:.x:xx...x.x..-----:.:.......---..x:....:xx.....x...:.x.:..x.x...xx.....---.....::..:.................x.....:..x...........:.....:..:.....:.....:.....:..::...................x.................................................-------x:.:...:x.:..----.:..x.x.x.x.:.....---------x.x.:.x...:.:x.:........:..x.............:.:..x:.x.::...:...-------.x..x..xxx..x..---x........x..::.:x:::::.::.:.---.:.......:.::x:xx.:..:...x..---x...x:xx....:.::xx:......x:...x...----.:x...x.......---:..x..x..x.-----------------------------------:...::....x::.:-:....:.:.:.----x:.:.x.....:--....::.......:x-..:....:..x............x...:........................-...:x..x:............................-....:........:x....:x............:....:...........xx.:..:......---:.....x...x..:....x.........-.............:.:.:.x:... 29M3D10M11I42M5D10M3I40M3D149M7I13M4I18M9D60M7D15M3I28M3I28M3D34M4I14M3I11M35D15M1D11M4D12M2D15M1I52M1D37M1I63M3D28M1I24M 570/758 75.2% 799/94230402 0.0% 117/758 15.4% 32524791 NA +11495 chr4 + 190214555 78887125 78887124 78887310 186 CATTTTTATTTCATTTCATTTTTTATTTCGTTTCATCTTATTTTT-GCAGATAGGCTCGAGGA---GAGAGCATCCTCAGATAAGAATGTAGACTCACTTTCTGCTCCACATAACCATCCTCCAGAAGATCCTTTTGGTTCTGTTCCTTTCATTTCTCATTCAGGCAAGTTACACATGTAACATCATCAC chr4 + 94230402 46358936 46358935 46359125 46358936 46358935 46359125 190 CATttttattttattttattttttgttctgtttcattttattttTTACAGACAGGCTGGTGGACAGGAGAACAACTTCAGATAAGAATGTGGAGCTACATTCTGCTCCACAGAAAAGTCCTCCCGAAGATCCCTTTGGTTCTGTTCCTTTCATTTCTCACCCAGGCAAGTGACATCTGTAACATTGCTAC ...........:....:.......:..::.......:........-:....:.....x.x...---....:..x.:..............:..x::..x............x..xx:......x........:..........................::.........x...:x........::::.. 45M1I17M3I124M 153/186 82.3% 190/94230402 0.0% 4/186 2.2% 32528189 NA +3774 chr4 + 190214555 78887968 78887967 78888018 51 CTTCAGTTCTGTTCCTTTTGTTTCTCACTCAGGCAAGTTACATATGTAACA chr4 + 94230402 46359068 46359067 46359118 46359068 46359067 46359118 51 CTTTGGTTCTGTTCCTTTCATTTCTCACCCAGGCAAGTGACATCTGTAACA ...::.............::........:.........x....x....... 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% 32528900 NA +13261 chr4 + 190214555 78902344 78902343 78902938 595 ATTTTTCATCTGGCTGGGAAATACTGTTCACAACTATTAGGATTCTCTTCTTATACTCAAACCCTGTCACTTGGCCTGCCTTCTGAGAAGCAGTACAGATTTGATAAAACCTTCTCCTAATCCACTAATCCTTGTGACTAACATG--GTAAATTGCTGGGAGATGATGGCAGGCAGTATGCTGCCAATTCAAAGTGAACTTTGAAGTCTTATA---------------GCCCCTCCCGTACACCCTCAATGATGAGACAACAGAAGGCATGTAATTACAATAGAAGTTTCAAGCCATTTATCTTCT-ATAATCTGATAGGTAAGAAAAGAACATCAAAACA--AAATTTCCCTGAC-ACTGGAAGCTTCTTATATGATTAAAAATGTACCACCTGTTTTATAACTAA---AAGAACAACTGCCCTCTAAAAGGAAAAGAGGGAAACCTGATTCTAGAAGAGCGGTAATATGCATAGTATGATGCAAACATGCTTCTCTCTTCATATT--GGATATTTTCTAAATATTT---TGAATTTTTT-------GGTATAGTTTATAAAGGTTT----------ATTTAATAATATATTGCAAT------ATTTGTTTAA-------AATAGTGTGGCATTAACTAGGATCTCATTCTTT chr4 + 94230402 46364568 46364567 46365202 46364568 46364567 46365202 635 ATTTTTTTTTT--CTTGAAAATAAAGGTGGTAAGCAGTGCAAATCCATTACAATATTCAGCAGCTGCTGCTCTGGCTGTTGTCAAAGAAGTAGTGCAGATTTAGTTGCAGTGT-------GCTGGTAATCCTTGGGCCTGACATGTGGCAAATTGCTCTGAAATGATGGC-GGCAGTATGTTACCAATTCCAAGAAAGCTGAAAGCCCTTATGCCCTACCCTTTGGTCACCCCCGCGGTAC-CCTCCAGTGATGAACTAGCAGAAGGCATGTAATTACTGACGTTGTTAGAGGGAATTCATCCTCTTATAATCGGATGTCTAGAAAAAGAACATCAGAACAGAAAATTTCCTTGAAGATTGGGATCATCTTATATGATTAAAGATGTTCCACCTGGCTCGCATTTGAGTGAAGAACAATCGTCTCCT------ACAAGATGCAAACCTGAT--TAGAAGTGTGCTAATCTGAACAGTACATTACAAACAGATGTTACTCCACATTTTTCAGCTTTTTAATAAACGTTTATCTGAACAGTCTATGCAGCAGTTTAGTTTGAGAAGATTGCATAAAATCAACGTGATGGAATGTTTCAATTTTGAAATCTGTTTGACCAGAGCATTAAATTGTCATTAACTGAGGAATTTTTTTTT ......:x.:.--..x.:.....xx.x.x::..x:.x.:x:.x..:x..x:x...:...:xxx...:::..:x.x...::x..x:.....:...:.......::.x:x.x:x.-------x.::x.........x.x..:.....--.:........xx..:........-.........:.:.......x...x:.:..xx:.:x:.....:---------------:....:x.x....-..::..:......:x:.:..................x:xx.xx...xx.:.xx...:...:...-......x...:xx..::............:....--........:...x-.:...:.x.x...............:....x.......x:.:::.x:.:.---........::.:.::..------.x....x.x.........--......x.:.x....x..x.:....::x.:......x::x.:x...:x...x..--:.x.x...xx....::...---....:xx.:.-------:..x......:x:...:..x----------.:x.:..::x..:..x....------..:.....:.-------.x..:xx..x........::.:xx.:x..:... 11M2D100M7D25M2I23M1D42M15I13M1D64M1I34M2I13M1I50M3I17M6D18M2D54M2I19M3I10M7I20M10I20M6I10M7I33M 388/576 67.4% 635/94230402 0.0% 78/576 13.5% 32537776 NA +3125 chr4 + 190214555 78909035 78909034 78909080 46 CCTTCTTACCTTCCCTTAGTCTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 15355532 15355531 15355577 15355532 15355531 15355577 46 CCCACCCACCTTCCCACAGTCTTTCTTCTTTTTTTTTTTTTTTTTG ..:x.::........x:.......:..:.................. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 63553503 NA +55393 chr4 + 190214555 78910593 78910592 78912048 1456 TTTATTTGAACTTGCAGGTTCTCCTGAAAAGAAAGCTGAACATTCATCTATAAATCAAGAAAATGGCACTGCAAACCCTATCAAGAACGGTAAAACAAGTCCAGCATCTAAAGATCAGCGGACTGGAAAGAAAACCTCAGTACAGGGTCAAGTGCAAAAGGGGAATGATGAATCTGAAAGTGATTTTGAATCAGATCCCCCTTCTCCTAAGAGCAGTGAAGAGGAAGA---GCAAGATGATGAAGAAGTTCTTCAGGGGGAACAAGGAGATTTTAATGATGA---TGATACTGAACCAGAAAATCTGGGTCATAGGCCTCTCCTCATGGATTCTGAAGATGAG---------GAAGAAGAGGAGAAACATAGCTCTGATTCTGATTATGAGCAGGCTAAAGCAAAGTACAGTGACATGAGCTCTGTCTACAGAGACAGATCTG---------GCAGTGGACCAACCCAAGATC-----TTAATACAATACTCCTCACCTCAGC--CCAATTATCCTCTGATGTTGCAGTGGAGACTCCCAAACAGGAGTTTGATGTATTTGGCGCTGTCCCCTTCTTTGCAGTGCGTGCTCAACAGCCCCAGCAAGAAAAGAATG------AAAAGAACCTCCCTCAACACAGGTTTCCTGCTGCAGGACTGGAGCAGGAGGAATTTGATGTATTCACAAAGGCGCCTTTTAGCAAGAAGGTGAATGTACAAGAATGCCATGCAGTGGGGCCTGAGGCACATACTATC-CCTGGTTATCCCAAAAGTGTAGATGTATTTGGCTCCACTCCATTTCAGCCCT-TCCTCACATCAACAAGTAAAAGTGAAAGCAATGAGGACCTTTTTGGGCTTGTGCCCTTTGATGAAATAACGGGGAGCCAGCAGCAAAAAGTCAAACAGC---GCAGCTTACAGAAACTGTCCTCTCGCCAAAGGCGCACAAAGCAGGATATGTCCAAAAGTAATGGGAAGCGGCATCATGGCACGCCAACTAGCACAAAGAAGACTTTGAAGCCTACCTATCGCACTCCAGAGAGGGCTCGCAGGCACAAAAAAGTGGGCCGCCGAGACTCTCAAAGTAGCAATGAATTTTTAACCATCTCAGACTCCAAGGAGAACATTAGTGTTGCACTGACTGATGGGAAAGATAGGGGGAATGTCTTACAACCTGAGGAGAGCCTGTTGGACCCCTTCGGTGCCAAGCCCTTCCATTCTCCAGACCTGTCATGGCACCCTCCACATCAGGGCCTGAGCGACATCCGTGCTGATCACAATAC---TGTCCTGCCAGGGCGGCCAAGACAAAATTCACTACATGGGTCATTCCATAGTGCAGATGTATTGAAAATGGATGATTTTGGTGCCGTGCCCTTTACAGAACTTGTGGTGCAAAGCATCACTCCACATCAGTCCCAACAGTCCCAACCAGTCGAATTAGACCCATTTGGTGCTGCTCCATTTCCTTCTAAACAGTAGATACTTCTGATGGAT chr4 + 94230402 46370028 46370027 46371486 46370028 46370027 46371486 1459 TTAATTTGGACTTGCAGATTCCCCTGGAAAACAAGTGGAGAACTCAGCCAGCAATCAAGGAAACAACTTAGGGACCCCTACCAAAGCTGGAAGACTGAGTCATGCTTTTAAAGATCCTCGGCCAGGAAGGAAGACTGCAG---AGGGACAAGTGACGAAAGGTGGTGATGAGTCAGAGAGCGATTTTGAATCAGATCCTCCCTCTCCTAAGAGTAGTGAGGAGGAAGAAGAGCAAGAGGATGAGGAGGTCTTGCAAGGTGAGAATGGAGACTTCAATGATGACAATGATACGGAACCGGAGAATTTAGGCCACCGCCCTCTGCTCATGGACTCTGAGGAAGAGCTGGAAGAAGAGGAGGAGGAGAAGCAAAGTTCTGACTCTGAATCTGATCGTACCAAACAAAAATTTGTGGAAGGGCTCCCAAGCAGTAGATTCAGAAATGTTATGGGTAGCAGTGAAGTTA---AAGAACGCAGTTTAATGCAAA------CACCTGAGGTGCCAACTA----CTGTTGTCAAAGTG---AGCCCTGGCCAGGAATTTGATGTATTTGGGGCAGTGCCCTTTTTTTC---------TCTTCAGCCTCAGGCAAGAGAGAAGGGCAACCAAGACGTCTCTTCTCAGACTGCATTTCCTAGCCTGAGCCAAGAGCAGGATGACTTCGATGTTTTCACCAAAGCTCCGTTCAGCAAAAAGGTGTCTCAGCAAGATGACCATGTGCTGGGAAGCAAGAATCA-ACTCTCGCCCACCTCGCCACGGAGCGTTGATATTTTTGGCTGCACCCCATTTCAGCCCTCTCTTCTCCCCAAGATG----AGTGGGAGTAAGGAGGACCTGTTCGGGCTGGTTCCTTTTGAAGAGATCACAGGGAGTCAGCAGCAGAAGGTGAAGCAGCAGCGCAACCTGCAGAAGCTTTCATCCCGCCAGAGGCGCATGAAGCAGGAGGTCCCAAAGAACAATGGGAAGCGTCACCATGGCACCCCAACAACCACAAAGAAGACTTTGAAACCCAACTACCGCACTCCCGAGAGAGCCCGCAGGCACAAGAAAGCAGGCCGCAGGGACTCTCAGAGCAGCAACGAGTTCCTGACCATCTCTGACTCCAAGGAGAACATCAGTGTTTCGCTGACGGACAGCAAAGACCGAACCAACCCTTTGCAGACAGATGAGAGTCTGCTGGATCCCTTTGGAGCCAAACCCTTCCACCCACCAGAATTGATGCGGCATCCTCAGCATCAGGGGTTTGGTGACAGCCGTGGGGATCATGGTGCAGTGGTAGTGGCTAGCAGGCCTCGGCAGAGCTCCTTGCATGGACCAGTGCATGCTGGTGATGGACTGAAAACAGATGATTTTGGTGCGGTCCCCTTCACAGAACTGGTTGTGCAGGGTGCA---------CAGAGCCAGCAGCAACAGGCACTAGAGTTGGATCCCTTTGGAGCAGCTCCATTTCCTTCCAAACAGTAAATGCTTCCAGTGGGT ..x.....:........:...:....:...:x...:x..:x.:...x.:.xx.......:...:::.x:x.x:.x.....:...::x:..x.:.x::....xx..x.:........xx...x.x....:...:..:x...---....x......xx:..:..x::......:..x..:..:.................:..:...........:.....:........---......x.....:..:..::.x..:..x..:x.x.....:..:........---......x.....:..:...:.:..:..:x.x.....x........:.....:..x...---------..:..:........:..x..:.....:.....x.x...x.:x:.:...xx...:.x::xx..x:x.xx.:.x:x.x::...xx....xx..---------......:.x:x.---....x.-----.....:...x------.....x..x--....:..----...x...::x....---.x:..:::x.....:..............x..x..x.....:...x.---------..xx.....:...xx.::.:....x.------..:.x:x.::::....:xx::x:......:x:x:::.x.x:........x..x..:.....x.....x..:..x..x..:.....:......xx.xx:.....xx:.....::x....:xx::..:xx..-...x..-..::x:.xx..xx::..:..x...:.x.......x...:.............-..:..x.x:...x.x.----....::..:..x........x..:.....x..x..:.....x..:..x..:.....:........:..:..x..:....---...:.:.:.....:..x..x..:.....:.......::........x:.x:.x..:.::...........x..:........x.....x.x..................:..:.x...:........x.....:..:...........:....::......x.:........:..:.....:..:..::.:........x.................:......x.:.....x..::.x.....:x.::xx..:x::..:..:x.x..x.....:...:....:.....:..x.....:........::.x.....x:..x:::....:....x:........x:.x:.:....x.....xx.....:::.:.---x..xx..x.x:.xx....xx.:..:.::..x:.:.....::..x.x...:x..xx....x.:......::..............x..x.....:........x..x.....::.:::x---------...xx...:...:xx..:x..x.x..:..:..:..x.....x..x..............:........:..:....:::...:. 140M3D85M3I51M3I58M9I91M9I12M3D6M5I10M6D9M2I7M4D14M3D47M9D26M6I130M1D6M1I52M1I16M4D79M3I373M3I118M9D84M 999/1414 70.7% 1459/94230402 0.0% 87/1414 6.2% 32540565 NA +12438 chr4 + 190214555 78915526 78915525 78916115 590 TACTGTGAGAATGAGATGACATAT---CTACTGTGAGAATACCATAAATGATGAATAGTTTATTTG-AGAACTTTTATACTCAGTGGTGT---TTTATATATTAAGATAAAAATATGTA-----CACACATGCATGT-CACATCTCTCTACTGTGGAGTTAATGTGAATTTTTAAAAAATGGAATTGCAACCACAATCATATCTAAGAGAACATTCACTCCTAGTGAGGGT---TTACAAAAGCTACTAAGAGAATAAGGTAGATGATAATGCAAAGGGTCATGATTTGGGGTTATTTTTGTTTTATTTTAAAATTTATACTGCTACTTTTGAAAGAA------------TTGTTTTTATGACTATGCTCTTTTTGTGATTGAAAAGTCATCTAATAG-AAGCTGTATAGAAGCTACTTTTTAATTGCTGGCAAACAGCTTT-AAGTGCACTTTCTTTGATTACACTTCCATTTTTTGTTAAACTTGAATTTTCTGAAGC-CTTTTATGTACCACTAAGCAAATAACTTTAAC------CTTTAAATAAAGCAAATTTACATCTTTATTGTATTTCTACTTGTTACA-AAACATACTTGCTAA-AGTAACTT--CAG---TCCTCAAATATAGC chr4 + 94230402 46374874 46374873 46375429 46374874 46374873 46375429 556 TACTGTGAAAATAAGTTGGTATATTTGCTACTGTGAGAATA-------------AGAGTTTATCTGGAGTTTTTTTATACTATATAGTGTATTTTTATATAT---GAGAAGTATATATAAAATATACACATGCTCGCACACATCGC---ACTGTGT------------TTTTTTAGTAACG---TTGCAGCCACAATCAT-TCTGATGGAAC---------TAGGAAGAGTGACTAAGGGAAACCTGCAAGAGAAAAAA---------AGTGCAAGGGGTGGCTGCT--GAGTTACTTTT---------------CTACAGCGCTTCTTTTCAAAGAAAAATGGAGGAAGTGGTGTGTATAGCTGAG-----TTTGTGACTAAGGCATCACCTAATATTAAAGAGCGTAAAATCTATTTTAAAATTGCTGGCATTCAGCTTTTAAGTGCACTTTCCTGAACTACACTTCCATTTCTTGTTAGACTTCAAGTTTCTAAAGCTTTTTTGTGTACCACTAAACAGAGAACTTTAACTTTTTTTTTTTGGTGAAACTGATGTATGTCATAAATA---CTGCAGTTGTTAAATAAACAAACATGATAACAGTGACTTTGCAGATCTCCTTAAACATGGC ........:...:..x..::....---..............-------------.x.......:..-..xx:.........xx:.:....---.........---..x..:x....:..-----:........x:.:-......x.---......x------------.....x.:x..:.---.....:..........-...:.x:....---------...x:..:..---.x.x::..:.:xx:.......x..:---------.:.....:....x::x::.--.:....:....---------------:..:.x:...x.....x......------------.x..x.x...::..:x.-----.......:.:.::x:...:......x-..:xx.::..:..x...:...xx...........xx.......-............:.x:.:.............:......:....x..x.....:....-:....:...........:..:.x.........------:...x::.:..:.x:..x..::..x.x.x.:---:.x:.x......x.-.....x..x..x...-...:....--...---....:...:..:.. 24M3I14M13D12M1I23M3I9M3D14M5I13M1I8M3D7M12D13M3D16M1D11M9D10M3I25M9D19M2D11M15D23M12I17M5D26M1I43M1I57M1I32M6I31M3D14M1I15M1I8M2I3M3I14M 382/512 74.6% 556/94230402 0.0% 122/512 23.8% 32540652 NA +10287 chr4 + 190214555 78920526 78920525 78920710 185 GGCCATACCT-AATTCACAAATGTGAAACATAGTCAGGACAAGGCTTGCTATGTCTGTACTGCATGACATACACTGTTGACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAGGTAGTTTAGTTGTCCT----GGAAAGAAGGTAGAAAGAAAATGATAA chr4 + 94230402 46378250 46378249 46378439 46378250 46378249 46378439 190 GGCTATACCTTCACTCACAAGTCCACGCTATGCTCAGGACAGGGCTTGCTGTGTCGGTACTGCATGATGTACACTGCAGACTGGTGCCACCAGTACAACATCACTACAGCAAGGATGTGCCATATTTGGTGACTAGAGCCGAGGTAGTTGAGCTGTCCTGTGAGGAACAAAAAGGGGAAGCAGTTGATAA ...:......-x.:......:.x::x:x:..:x........:........:....x...........::.......:x.....:........:..:...........x........:..............:..x..x...........x..:......----....x:..::x:.:...x.:x...... 10M1I148M4I27M 145/185 78.4% 190/94230402 0.0% 5/185 2.7% 32542276 NA +14306 chr4 + 190214555 78926518 78926517 78926742 225 TACCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCAGTGAAGAGTAGGAATCACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGCGCAAAGAACACTGCCAGGATCATAGCAAGCACTGTGATCAAGTACACCTGACGCCAGTACT----AGAATGAAAGGAAATCACATTT chr4 + 94230402 46380129 46380128 46380357 46380129 46380128 46380357 229 TACCTGTACAATAGCTGCACCAATGCCGCCGTTGAGTGAAACCCAGTGGATAGTAGGAATGATGCCATACCCAGACACTGAGCAAAAGATGATGGAGCGCAGCCTGCGCCACTGCTGCGTGAGGTAATTGGGATGAATCTGAACAAAAAATACTGCCAAGATCATTGCCAGCACAGTGATTAAGTACACCTGACGCCAGTACTGAGAAAAAAGAAACAAAATCAAGTTT ..............xx........x..x..:.....:x..........:.x.........x.:x.....:..x..x..x..:...........:..:..x.....x:....:.............................x:....:..:.......:......x..x.....x.....:......................----.:..x....x:......x:... 203M4I22M 187/225 83.1% 229/94230402 0.0% 4/225 1.8% 32546389 NA +11592 chr4 + 190214555 78930164 78930163 78930349 186 ACTTACGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCCAATAGAAATTCCTGCATAATCTAATGCCATCCATCTTCGACATGTTTTTTCTGACCGATGGCAGGAAAAAAGATGATAGCCCACAGAGCAAAGCATACAGACCTGT-------GAAAAATAAAAACAAATTAA chr4 + 94230402 46380974 46380973 46381166 46380974 46380973 46381166 193 ACTTACTTTACTACAATAAAATGCATAAAACACGCCTGATACGTAGCAGCCTAGGATACCAATGGAAATTCCTGCGTAATCTAATGCCATCCATCGTCGGCTGGTCTTCTCTGAGCGATGACAGCAGAAGAGATGATATCCTACTGAGCAAAGCATACAGACCTACATAAATAGCAAAACAAGGACACATTAA ......x...:.............:.....:..x.....x..:........:..x..x.....:...........:...................x...:.xx..:..:.....x.....:...x.:..:........x..:..x...................::-------.x....:..::...x..... 166M7I20M 153/186 82.3% 193/94230402 0.0% 7/186 3.8% 32549190 NA +3435 chr4 + 190214555 78931207 78931206 78931300 94 AAAAAATTGGGCATGGCGGCATGCACCTGTGGTCCCAGCTACTTGGGAGGCTAAGGCAGGAGGATTACTTGAGCTTGGGAGATCGAGGCTGCAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..x:x:..::.:..--.....x...:..:...........::.....:..x.xx.x.:.x:......:.:::.:..x.:x:.....:.. 19M2D73M 60/92 65.2% 92/94230402 0.0% 2/92 2.2% 2898021 NA +7580 chr4 + 190214555 78935113 78935112 78935286 174 TGACTTACCTGGAAGCAGAAAAGACAAATAGAACAAATTACAAAATCTTCTCTGGACGCACTTGCTGAAGGTAACACAGATGTCATGTCATATATTCCCAGGGTGAAGAAGAGAAAGAAACCCAGCAAATGACTCCAGATGTTTACTGTCTCATTAGATAAAATAAACAAACTG chr4 + 94230402 46382825 46382824 46382998 46382825 46382824 46382998 174 TGCCCCACCTGGAAGCAGAAGAGGCAGACGGCGCAGATGACGAAGTCCTcgcgggcggcgcgggcggcgggcAGCACGACGGTCAGGTCGCGGATACCCAGCGTGAAGAAGAGCAGGAAGCCCAGCAGGTGGCTCCAGATGTTGACGCTCTCGTTGGAGAGGATGAAGAGGCTG ..x.::..............:..:..:.::.x:..:..x..:..:..:..x.x..xx..:.xx..x.x:..:.:...::xx....x...:::x..x.....x...........x.:...:.......::..:...........x..xx....:..:..x.::..:..x.::... 174M 118/174 67.8% 174/94230402 0.0% 0/174 0.0% 32552288 NA +14431 chr4 + 190214555 78939032 78939031 78939336 305 GACCGTACCTTTTGATACACAGCCTGGACGGCAGGTAGGCCCGGTAGCCGTCGGTGATGTACGGGTTGTCCTTGAGGGACCCGGGGATCTGCTCGTAGGTGTACAGGCGGATGCCACGGGGCACCAGGACCGGCCAGTACTGGTAGCTGCCCAGCTCGATGTAATGCGCGCTCTTCAGCAGCTTCTGATGCATCGTTCCCGGCCGCCGCCGCTCCCCGGCTCGGGAGCTCCCCCAGGTCCCGCC---TCCCCGGGGAGGG---GGCTTCGCCGCTGGCGCCCCCGCCCCGGAGCCCGCGGACGCTGCGCGA chr4 + 94230402 46383056 46383055 46383350 46383056 46383055 46383350 295 GGCCGTACCTGCGGAGGCAGAGGCGGGAGGGCAGGTAGGCGCGGTAGCCGTCGGTGATGTAGGGGTTGTCCCTCAGGAAGACGGGGATCTGCTCGTAGGTGTACAGGCGGATGCCGCGCGGCAGCAGCACGGGCCAGTACTGGTAGCCGCCCAGCTCGATGTAGTGCGCGCTGCGCAGCAGCTTCTGCTGCATCCTGCCCGCCCCGCATCGGCCCGCGG----------CCCTCCGATCCCGTCACGGCTCCGCGCAAAGCCCGGCCGGGCCG-----GCTCGCGCCCCGCACGTTGCGG-CGCTTTGCGA .:........x:x..x:..x..x.x...x...........x....................x.........:.x...:.xx..................................:..x....x...x..x................:...............:........x:x............x......x.x....x..xx.::..x:..x...----------...:.x.:.....:.---x.:...x.x.::.---...:xx....-----..:.x.......x.xx::....-....x:.... 219M10D15M3I13M3I10M5D22M1D10M 229/289 79.2% 295/94230402 0.0% 22/289 7.6% 32555976 NA +7723 chr4 + 190214555 78962714 78962713 78962944 231 TTTGAAGAGTTGTTGCATTTGCTCTGTATGCTCTCTGTGTTTTGATACACTGAGCAAGGAATGTTGATGAGACATGAGGCAGAACAGCTTGTTCCTCCACAGCTATTTTGACTTTGCAATGCTGGCAGTAGTAAAAAAAAAAGAAAAAAAAAGAAAAAAAAATAGAAAAAAAAGTTTAGTGTGTTAACTAAGCAAACACATGGGGCTTGGAAGAAGGCTAGGGAACAGCTA chr4 + 94230402 46391089 46391088 46391282 46391089 46391088 46391282 194 TTTGAAGGGCAGCTGAATTTGCTA---ATGTTC---GTGCTTTGATACAGAGTGTGAGAAATGTTGATGAGGCATGAGGCTGAACAGCTTGCTCTATTGCTGCTGTATCGGCTCTGCAGTGCTGACAGTAGTTAAAAAAATGGC------------------------------TTTGGTACATAAGCTTAGTTAATATATAGAACTTGGAAGACAACTA-GGAACAGCTA .......:.:x.:..x.......x---...:..---...:.........xx.x.::..:............:........x..........:..:x:::.x...:.x.:.:..:....:.....:.......x.......x:.x------------------------------...:..:::.x.:..x..:x..:.:..:.::.........x::...-.......... 24M3D6M3D108M30D46M1D10M 143/194 73.7% 194/94230402 0.0% 37/194 19.1% 32571625 NA +19309 chr4 + 190214555 78984632 78984631 78985193 562 CCCACTTACTGTATCTTCATTATTAATTCATTTAACTTCTGTCACAAGGAGATCAAGCATTTATTCCTTTTTGAACATTCACTTCCCTACACGCTTAGAAATATTTTACTGACAGC----AATGGCTACCTCCATGGAGCCTGTGTAAACACGAGTTTATGGGC-TGCTGTGCAGGCACCTTTGGTGATTTACTTTCTGGTTATTGGGAT--------------------------------------------------TTATTTATTTTTTGATGGACTGGTAAATTATGAGGCTGTGGAC------------CTTGCCAAGTTTTCAGGTATCAACTCAGCC---CTGCTGGAAAAACTGTGGTTGGCACTGCAACACAGAGAATGACCAATGAGGCATCATATATTTTTAATAGATATA-TGTTTTAATAAACATTCTCC-TCCTAAAGCAATGGATTTTAAAATAGGCTTTTGCCTTGAGCCATGTAGCTACCCAGCTGTGAGTTTTATAAGGCAACAATCTCCACATCATTAGATGTTGTGACTAATATTCCAGCAACTGAAATAATAGCTATTTACATGCACATAAAAAG-TTAAAATGACATTT----AAGGTGCACTTCTACTCAGAAAA chr4 + 94230402 46392603 46392602 46393211 46392603 46392602 46393211 609 CCCCCCCATGAGAGCTTCATTATC--TCAGCGTAACTTCTGACATGAACAGATCAAACTTGATTCCCTTTCTGAATGTC--------------------AGTCTCTGGCTGTCAGTGGGAAGAGACCAACT-----GTGGTTGTATGAGTGCAAGTTTCTGGGCACGCCACGTGAGAGGGATTGGTGAGCTTCTCACAGGCTGCTGGAATGCTTTTATTGTGTTTTTGGGttggttttgtttttgtttagttttttttgtttttttttttTTTGATGGACTAGTAAATTATTAGGATGAGGACTTTTCAGGCAGGCTTGCCAGGTTTTCAGCAGTCTTCCCAGGCGGGCTGCCTCAAAAA---GGTTTGGCACTGCATCACATGGAATGACCGATGATGTGTCATCTATTTTTAATGGGCAAAATGTTTTAATAAACAATCTCCCTCCTAAAACAGTGGATTTTAACATAGGTTTTAGCCTTGAGCCATGTAGCTACCCAGCTGTGAATTTTATAAGGCAACAATCTCCACATCATTAGATGTTATGACTGATACTCCAACTACTGTAAGTGTAACTATTTCCGTGCACTAAAAAAGTTTCAGATAACAGTTACAGAAAGTACAGCTCTGCTTGGAAGA ...x.::.:x:x.x.........:--.:x::x.........x..::.:x.......:.x.xxx.:.....:....::.:--------------------.:.x.:.x:...x...:----.:x.:.:.x..-----.x.x:...:.:.:::.:.....x.....-:..:::.:::.x:xxx.......x:.x..:x.x..:.::...:..--------------------------------------------------..x...x..............:.........x...x..x....------------.......:........xx:..xx.:...x.---....:xx.....---x.x...........x....x:........:....x.::....x..........:.::.x.-..............x.....-.......:..:..........x.....:...x..............................:....................................:.....:...:....:.x....x..xx:..:......x.:.....xx......-..x.:..:...x..----..:..:..x:...:..::...:. 24M2D53M20D17M4I11M5D28M1I45M50I43M12I30M3I12M3D60M1I20M1I152M1I14M4I23M 395/532 74.2% 609/94230402 0.0% 107/532 20.1% 32592029 NA +45618 chr4 + 190214555 78987483 78987482 78988037 555 TGCACAGCATGCCCTCAGCTTCAGCTGAAGTCTTGAAAGACTTTGCGGGTTATGACATTCCCCTAAATGTGCTGAGCTTTCTTTAACCTTTCATAAAACATTGTGATCTTTATGGACTGTATCATATTGTGCAGTAATGTGCTTTATTGTCCACAGAATAAGCTTTTCTTAAAGATAATTGGAAAGCTGGAAATGGCTGCTATCGGCTGATTTTTTAAAAATACATTATTTCTGAAATGGGGCTGGTGTAATAATGACCCTATCTGTTCAAGATTTAAGATTTGTCTTGGCAGAGAAAATTGATCCATTTCACCTTTGTCTAATGGAAATTTTTATCTAGGATTATCTGTTTATGTAAATGAATGTTCCTCTGAAAAGGGAACTTGAGGGGGCTGTAAATCTTGGTGACACTTCAGTTTCATAGGGGAGAAATTGGAAAGGATTCTAGTATTTATCTGCCTGAAATTGGTTATAAAAACAAAGTTGTCTTCATGTACCTGCAGCATCTGATGTTTCCTTGAATTTCATTATATTTTTGAATAATTCAGTGCTATA chr4 + 94230402 46394677 46394676 46395230 46394677 46394676 46395230 554 TGCACAGCCTGCGCGTGGATCCAGTT-AAGTCTTGAAAGACTTTGTGGGTTATGACATTCCCCTAAATGTGCTGAGCTTTCTTTAACCTTTCATAAAACATTGTGATCTTTATGGACTGTATCATATTGTGCAGTAATGTGCTTTATTGTCCACAGAATAAGCTTTTCTTAAAGATAATTGGAAAGCTGGAAATGGCTGCTATCGGATGATTTTTTTTTAATACATTATTTCTGAAATGGGCCTGGTGTAATAATGACCCTATCTGTTCAAGATTTAAGATTTGTCTTGGCAGAGAAAATTGATCCATTTCACCTTTGTCTAATGGAAATTTTTATCTGGGATTATCTGTTTATGTAAATGAATGTTCCTCTGAAAAGAGAACTTGAGGGGGCTGTAAATCTCAGTGACACTTTAGTTTCATGGGGGGAAAATTGGAAAGGATTCTAGTATTTATCTGCCTGAAATTGGTTATAAAAACAAAATTATCTTCATGTACCTCCTGCATCTGATGTTTCCTGGAATTTCATTACCTTTTTGAGTCATACGACATTACA ........x...x.x::.x.:...:.-..................:................................................................................................................................................................x.........xxx......................x................................................................................................:.......................................:.......................::.........:........:....::.....................................................:..:.............x.x................x...........:x.......:.x..x.:::::..:. 26M1D528M 516/554 93.1% 554/94230402 0.0% 1/554 0.2% 32592806 NA +3814 chr4 + 190214555 78990022 78990021 78990132 111 GTGTGTGTGTGTGCGTGTGTGTGTGTGTGCGCGCGCGTGTGTGCGTGTGTGCGTGTGTGTGTGTATGTGTGCGCGTGTGTGCGCGCACGTGTGTGCGTGTGTTTGTGTGTG chr4 + 94230402 5214210 5214209 5214316 5214210 5214209 5214316 107 GTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACA----CATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .....:x::..x..::.::.x:..........:x.:..x..::.:::----.:.x.::....:.:::.x...::..........:x.........:.::..:xx:...... 47M4D60M 67/107 62.6% 107/94230402 0.0% 4/107 3.7% 73775812 NA +3049 chr4 + 190214555 78997622 78997621 78997668 47 TGTTTTCTTTTCTTTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 68431720 68431719 68431766 68431720 68431719 68431766 47 TGCTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTT ..:.....::..:.....x..x..:..:.:................. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 10565902 NA +3097 chr4 + 190214555 79009489 79009488 79009571 83 CTCTTCTTTGTACCTCTGGTAGATTCAGCTGTAAATCTTTCTGGTCCTGAGCTGTTTTTTTTTTTTTTTTTTTTTTTGGTGGT chr4 + 94230402 60470958 60470957 60471040 60470958 60470957 60471040 83 CTCTTTTTTGTGTGGTTCACAGTAGCACCTTTTGATTTCTTTAGTTCAAAGCAGTGTTTTTTTTTTTTTTTTTTTCTTGTAGT .....:.....::xx:.x::..xxx..x..x.x:..:.:.:.:..:.x:...x..x...................:.x..:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 18538531 NA +13311 chr4 + 190214555 79015435 79015434 79015841 407 TTGCCAGCACTGAATAAGTATAGCTCTGTCAATTTGTAGTTTAGATGCCCTGTAGTTCAACAGGCCTGAACACTCACCTGACTAGGGCAGCTTGGCT--GTGAAACC----TTCATTCTCCCCACCCCCACCTCCAAGAGCTGTTATAAACACTGGA--------------AAAAAATTGTGGACCATCTGTAGCTGCAGATGGGGATTTGTGGACGGTGTACAAGTTGCAGTCATGGAATCAGCAGAGATGCCCAAAATATGTCATCCAAATTGACCAGTCAGAATGGTGAGGAGAGCATTATCTTGTGCAGATACTGCGTCTCACA-----ACCATGGTGAATGGGCCCCTCATGGGATCACAGGCTCATTGTCTTTCCTCATTCTCTGATAATACTACTGTTTTAACTTACAGCAGGCTGGACTTAGAG chr4 + 94230402 46397545 46397544 46397953 46397545 46397544 46397953 409 TTTCCAGCACAGAATAA--ACAGTATTGCAGATTTGGAACTGGGGCTTTCTTTACTTCAGCTGAATTCAATGTCTACCTGGCTGCTGCAGCAGGGCACAGTAAAACCGCATCTCTGCCTCTTTTCTGCAACCTCGAAGAGCTGTTACGCACAATGAAGAAAGGGAGGGAAAAAAAAAAAGTGGACCATCTGTAGATGCAGATGGGGATCTGTGGACGGTGTACAAGTTGCAGTCACTGAGTGAGCAGAGATGCCCAAAATATGTCATCCAAATTGACCAATCAGGCTGGTAAAGGGAACATTAGCCTGTTTGGATGCGCAGCCACGCAGGCCCACCCCAGCAACTGTGCGGCTCACATGGGC----GCTTATGGACTTTTCTTCCCC---------ACTGCTGCT--------CAGCAGCCGGAAATCAGAG ..x.......x......--.:..:x:..:x:.....x.::.x:.::x::..x..x....:.x.:x:.x..:::::.....:..:xx.....xx...x--..:.....----:..xx:...:::x.:x.x.....x...........::x...x..:.--------------......xx...............x.............:..........................:x..:.x.....................................:....:x....:.:.:..:.....x.:...x::...:.xxx.:.x.:..-----...x::.::.x..x..xx....::x.:x.----...:..x.x....:..:x::.---------...:...:.--------......x.x.:.x.:.... 17M2D78M2I8M4I46M14I157M5I29M4D21M9D9M8D19M 271/384 70.6% 409/94230402 0.0% 48/384 12.5% 32617890 NA +37776 chr4 + 190214555 79023728 79023727 79024294 567 CTCTGCTTCCCCTCTTAC--TCCTCGTGTCCCTCTCTTTCCTTT--CTGCTCTTTATCCCCACACCTCTCACCCTTAACCACTGGTCCTGCCCT-GCCCAATAAAGCCTCTGCACCTTCCTGCTTGTAATTTGTCGCTAATCAGCTGTCACTGTCATCGCCATGATGAGAGGTTCATCTCTGGCTGAGGGTAATGGCCTTAAAAGTCACACAGTCAATGTCAATGGGATCGCTCCAATTCAATCACTGAGCTGAATGAGGGATGGCACCTGCTGACATTAGCACTCATTTTGAGCTCAAGCATCTGGGCCCCAGTAAATAACCATCAGTGGGTGGGTCTGGGGGACAGGTCATTAGCCCCACGAAAAATAAATATCGCTTCCCTTGATGGCTGCAAGTAATTTAGCTCAGATGAGGAAATTTCACCCTAGATTAAGTATGATGAGCCAATATCAGTCAGAGGAGGCCAAACAGTGAGAGCTTGATGAGATAGAGGGAAATTTATATTCAGCTGGCTGCATGTGAGATGAGCTCAAAGAAACAACATACCCTTCTGGCCCATCTTCATGTGCA chr4 + 94230402 46399996 46399995 46400556 46399996 46399995 46400556 561 ctccgctactcattctaccttccctgactccatgcttttcccttgcctcctcccaatctctcctccccttcccccc----------cccACCTTCACCCAACAAAGTCTTAGGTTCTTCCTCCTTGTAATTTGTCGCTAATCAGCTGTCAGCGTTGGAGCAATGATGAGAGGTTCATCTCTTGCTGAGGGTAATGGCCTTAAAAGTCACAGAGTCAATGTCAATGGGATCGCTCCAATTCAATCAGAGACCTGAATGAGAAATGGCCCCCGCTGACATTAGCACTCATTTTGAGCCCAAGCATCTGGGCCCTAGTAAATAACCATCAGTGGGTGGGTCCGGGGGACAGGTCATTAGCCCCACGAAAAATAAATATCGTTTCCCTTGATGGCTGCGAGTAATTTAGCTCAGACGAGGAAATTTCACCCTAGATTAAGTATGATGAGCCAATATCAGTCAGAGGAGGCCAAACAGTGAGAGCTTGATGAGATAGAGGGAAATTTATATGCAGCTGGCTGAATGCAAGATGAGCTTAAAGAAATGATGTACTCTTCC-ACTTTTCGCCGTGTGCA ...:...x.:.x.::...--...::.xx...x.x::.....:..--..x...::x...:.:x.x..:..:x...::----------..::..:.-:.....:....:..:x.xx:......x............................x:..::xx..x....................x............................x..................................xx..x.........::.....x..:.........................:...............:..........................:......................................:................:................:..............................................................................................x..........x...::.........:.......::.::...:....:-:.::x..x:.:...... 18M2I24M2I30M10D8M1I459M1D17M 476/556 85.6% 561/94230402 0.0% 16/556 2.9% 32623732 NA +10636 chr4 + 190214555 79038013 79038012 79038298 286 TTTTATGTACTGCTGAAATTATTCCCCT-ACAAACTGTATTTTATCTGGAGAAGTGATTGGTGTCAAAAGTATTGCTTGTATCAAGATATATGTACAGAGTGGAGGTTGCTCAGTAATATATAGTGTCCTGATGGTTTATGTTGACGGTGCACTGACATAATTTACATCAGCCATTCCTTTTTACCTTGAACTATAAGGTGTGATAGCTTCCGGATTTATATTTGTAAGACTTTTAACCATTTAAGGAGTTACTGTTAACAAATGCACACATATTT-ATGATATTCTG chr4 + 94230402 46405787 46405786 46406070 46405787 46405786 46406070 284 TCTGATGCAGGGCTGAAACAATTCCCTTTGCAAGCTGTATTTTATCGTTGGAACTGATGGGTGTCAAACTTAC-ACTGGTATCAAGACAGATGTATAGTGTTTGGGGCCTACAGTAATATGTTGTGCCCTGTTGTTTTATGTCGATAGCACGCTGGTA-AATTTACATCAGCTATTCTTTCTTACCTTGAACTGTAAAGTACAGCAGCTGTTGACTTCTTATTTACAGCAC-TGTAAGTGTTT-AGGCTATGCTTCTGACAAGCACACACATATTTCATGGTGCTCTG .:.x...:.xx.......:x......:.-:...:............xxx:...x....x.........xx..:-:..x.........:.x.....:..x..xx:..x:x:x.........:.x...:....x..x.......:..::.::.:...::.-.............:....:..:............:...:..:::::....x::.:x..:x.....::.:x..-.x...x::...-...xxx.:..x:.:....:::...........-...:.::.... 28M1I44M1D84M1D72M1D11M1D32M1I11M 198/282 70.2% 284/94230402 0.0% 6/282 2.1% 32632226 NA +26462 chr4 + 190214555 79043061 79043060 79043593 533 ATTTAAAAATTCTCAAGCTATTATGTCTTTTAGACTATGAAAGCATCAGCAGACCCTTAACTAGAGCTTTGTGAGGGGCAGCGCTGCAATCCAATGAATAATATCTATGAATCCAGGATCACGTTGGATATTATCACTCATTACCATTGTGAGAAAAGGATGATTAAACTAATAGTTACTCGGAGACACTTCTGATGACAGGAGGCTATGATGAAAATAAACTGGCTTCAATATACATTTAGAACCGGTAATAATGGGATGTGGCAGGAAGCCAATAAATGAACATGGCCCTCCGCTCTGATCAATGAATTACTTTCCCTTCTCTTTCCCTGCTCTTGAGGGCAGCACAGGAACCTTAATGAAAAATCAATAACCCTCTGTAATTCAGAAATGGAATCAATCGTTTGACCTGA-------CTTTTTCTTTTT-----------------------CCTTGCTAAGAGAATG--CTTAGCTCAAGATAGAATTCAGTTGTAAAGAGCTGTTCTTCAAAAAGCCTACAGAAGACACCTGATATCAGTCCACAACAATTTATACCTGC chr4 + 94230402 46409329 46409328 46409878 46409329 46409328 46409878 550 ATTGATAAAGTCCCAGGCCTGGGGGCTTTGTA----ATGGAAGTGCTGACAGACCCTTAACTGTAGGATTGTGAAATGCAATGCTGTAACACAATGAATAATATTCATGAATCTGCCATAATGCTGGATATTATCACTCATTACCATTGTAAGAAAGGGGTGATTAAACTAATAGTTACCGAGCGACATTTCTGGTGACAGGAGGCAATGATTAGGATGAACTGACTTCAATATACATTTAGAACTGGGAATAATGGGATGTGGCAGGAAGCCAATAAGTGAACATGGCCCACAGCTCTGATCAATGAATTACTTTTTTTCCGCTTTAC-----------AGCAGTACATGGTGTTTAATGAAAAATCAATAGCCCCCTGTAATTCAAAACTGTAATCAATCGTTTGACCTGAAGctttccttttttttttttttcttttttcctttccccctccctttcCAGAGAAGATGTCTTCAGCTGAGGACACAGTTCAGCTGCAAGGCGCAGTACTTCACTGGGCTTGCAGAAGGAACCTGACACAGTTCTGATGCAATTTACACCAGC ...x.x...x..:..:..:xxx:x.::..x..----...:...::::::.............:x..xx......::x...::....:..:x.............::.......::xx..x.:.:..........................:.....:..:...................:x:.x....:.....:...........x.....x.::..:.....:....................:..x.............................:............x.x......................:::.:.x....x.-----------:....:...x.:xx:.................:...:..........:..x..x...................-------......:.....-----------------------.:..x.x:...::...--:.:....x.:..:.x.:.....:..:..:.x..x..x.....xx::..:.:......:x......:.:x:x..::xx:.......:...x.. 32M4D293M11D73M7I12M23I16M2I92M 398/518 76.8% 550/94230402 0.0% 47/518 9.1% 32633732 NA +30594 chr4 + 190214555 79050241 79050240 79050816 576 TCAGTTCACCCTGCGCCCGCGGTTGAGCAATGATCTGCGTGGTCAGAGTTTGTGACTGCGGTGGTCTCGGGGGCGCAGGGC------TGTC-CGCCATGTGAGGCATGGCTCTTCTTCCCAAGAAAGCCAGTCAC----------GAATCCAGATATTCAGGGCACGCAGGACAGAGCAAGGGAGGAAGCCACTGTCGCCGATCTCGCCT--AATGCCCCTGGCTTGCTCTCCTCCTTCTTCTTCTGGTTCCTGTTTTCCTGGTACATTTTATTCCCCTCTTTTCTTCTCCCCCATTCCCTTAAGTAGAGGTGACACAGATCAATACCTTTGATGGAAAGTAATAATCAGGCCTATTAAGTGACAAAGGTTTACTCTGTAACAGCTGTGCTGGCGGGAGAGGAGAGCTTGTCTGACTAATGAATCATGAAACAATCAGGCAGTAGCCATTTGTGTTTAGATCTGTAAATATGGTGTGGTTCAAGTGCCAGACCATTGCCGGCGCTCCAGCTGGGGGCACAGATGGTCCGCATTCAGAGCAGCACGAGTGTGAAGAAAGGGTTTTTTCCCTTTCTCTGTCCCACACCGCACCTCTC chr4 + 94230402 46412838 46412837 46413421 46412838 46412837 46413421 584 TTAATTCACATTGTGTCTTTTGCCGACCAATTATATGCATGGCCATATTGTGTGACTGCAGCAGTCT----GGTGCAGTGCAAGGAATGCCACATCATGTGCGAC--GCCTCATCTCCATGAGTAACCTTGTCACTGTGCTAAATGAATACATGAATACAGTACAGCCAGGAGAGATTAAACGTATTGACCAGTGCCTCTAATAACCACAGAAATGTCA-----TTGTTTTTCATTTTTTTCCCCCCTTTCTTGTTTTCCTGACACATTTTGGTCCCCTTTTTGCTTTTCCCCTTTTCCCTTAAGTAGAGATGACACAGATCAATACCTTTGATGGAAAGTAATAATCAGGCCTATTAAGTGACAAAGGTTTACTCTGTAACAGCTGTGCTGGCGGGAGAGGAGAGCTTGTCTGACTAATGAATCATGAAACAATCAGGCAGTAGCCATTTGTGTTTAGATCTGTAAATATGGTGTGGTTCAAGTGCCAGACCATCTCCAGCACTCCAGCTGGGGGCACAGATGGTCCACATTCAGAACAGCACAAGTGTAAAGAAAAGCTTTTTTTTTTCTCCCCCCCCCCCCCCCCACTATTC .:.:.....x:..:.:.:x:x.::..x....x..x...:...:..x.x.x.........:.::....----..:....x..------..:.-.::......x.:.--.x...x...:.x::..x..x.:x.....----------....x..x:x..x...x:..xx.....x...x:..:x.x:xx::...x..:.x.::..xx.xx.x--....:.x-----...:.:.:.x::..:...::.:xx...:..........::.......:x......:...x...:.....:x...............:........................................................................................................................................................................................:x..:..:.........................:........:......:.....:......:.x......:::.:..:.:x:...x.x..x...:x:.. 67M4D10M6I4M1I13M2D28M10I65M2I7M5D371M 446/565 78.9% 584/94230402 0.0% 30/565 5.3% 32637403 NA +35607 chr4 + 190214555 79057693 79057692 79058867 1175 TTATCTAAAATGCC--TGTAGACCAAAGAGCATTGACTAAGAAAAGAGAGCAAAAGTGTTTTCCTGC----AATCATTATTTTATTGGGACAAAAGAGCAAAGTTTTCTGAATCAACCTTAAGAAGTACAGATATTGAACATGTTAACAATACTAGTGTTTTTCCTAAAAACCACATTACACCTCACCTCACTGGCTCTATTGAATGGA-ATGTCATGTCAAA---TGAAAGGAAATAAAGAAGCCCAAACTGCTT--ATTCGAACAAGGTGCCATCAATAATGCCCACATGGGCGATTGTTCCCTGATTTAAGAGCTTGTCTACTTCATGCATCCACTTAAAGGCCTTTGGATAGAAGAAAACACACCCACCCAAACAGAATGTTAAATTAAGAAAGATTCATTCCCATTCTACTGCCCCATTCCTTATGCAGCCAATTTCCTTTGCCTATCTCTCT-CTCATAGCATTCATTCTATTGACCATTTGTAGTATTGAATTAACGATGTGCAATTTGTGCTTCTAAACTTAGACCCTGTGCCTATGTATTTACATATAATAGGACCTTTGTTCTAATTTTTAAATAAAAATG-------TTTGCTTTTGGAAGGCGTCTT---AGGAAGATCAATCAGGGAAGAACACAGCTGGCTTTTGAAAGTTGAGTTTCTATTTAAAGTTTCCTGCTATTGCCTTGACAATTTTATTATTATCAAAGCATTTGAATATTAGATATGACGATGAACACTCACTGCAGGGAAGAGAGGAGCAGGAACGTAAGTGGGAGGGGGCCACTAACAATTGTGCCCCCCGTTGT---AGCCATAATAATTTAATATTCTCATACTGGGAGGCTCCATTTTTCTTGCCCTATATGGAGCTACTCACTGGATGTGTTGTTTCCTTTTGGCCAAACTATCAGGGTC-TCCCTTGAACAGCCTGTAAAGACTTCAAATAAAGAATCATGCTGATAATTGCCTAAGGGCAGGATTTTT--GTTTT------------------GCCTAGGAGTCAGTAATTTAACTGTTACACTGAGGGAGGCTTCTGGGTTTTGAATAGAATTTCTTTCAAGGTTGTATTAAAGTTGTTGGTAGATCAATAGTTTTTCATCTTGGTGACTATTTGTCT-CCTCTCAAAAACTAGGGATTACACAGTCACTAAGTGATACAGACTCTAGATGTATTGGAGTTGCCACATGCCG chr4 + 94230402 46415806 46415805 46416914 46415806 46415805 46416914 1109 TTGTCTGAAATAGTGATACAGAGCAAAAGG----------GGAGAGGGAACATTTTTCTTTTCCTGTTTTAAGCCATTCTTTTGTGTGGACAAAGGAGCAA-GTTTGCTTAA---ACCATAAGAAATACAGATTTTGTGGATTTCAGCAATACTGCCATTCTTTCAAAAAATCACATTGTATCCCAGCTCATTTAAGCTGTTGAATGGTTATGTCAAGCCAAAAGGTGGATGAGAGAGAAAAGGCCCAAACTCTTTCAGCTTGATCC--GTGCAATCGATAAAGCTCACTAAGGTAATTACTCTCTGATTTAAAACCTGTTCTTCTATTTGCA--------ATGTTATTTGCCTG----------CACTGACCAAAACGCTGCAGAGAACAAAGAAGTTATAACTCACATAAAAA------ATAGTTTCTCCAGGAAGTTGTTTTCATCCCTCTCTCTTCTGATTGCCCCCTTTCCCTTT--------------------------------------CTTCT------------------------TCTTCTTTTGGGAGGAGAATAGTTTTGTTTTTCTTATGAGCAAGGCTTAATTTTGCTTTTTGGAGGCATCTTCTTAGGAAAAGCAACTGGGGCCGTGCACAGCTGGCTTTTGAAAATTGAGTTTCCACTGAAACTTCCCTGCTATTATCTTGACAATCTTATTATTATCAAAGCATGCAAATATTAGGTGTGACAATGAATGCTCACGGCAGGGAAGAACGTAACTTGGTCATCAGAGGAAGGGGGCCACTAACAATTGTGCCCCCTGTCACAAAAGCCATAATAATTTAATATTCTCATACTGGGAGTCTCCATTTTGTTGGGCCTGCATAGAGCT----GCTGAGTGCGTTGTTTCCTTTTGGCCAAATCACCAGGGCCGTTCCTTGAACATCTTGC-AAGACTTCAAATAGAGGATCATGCTGATAATGACTTGAGGGCAGGattttttaattttttatttttttttCCCTACGCCTAGGAATAAATGATTTAACTATTAAACTGAGTCAGGCTTCTAGCTTCTGAATGTAATTTATTTCAAGGTTGTGTTAAACTTGTTAGTAGATCAATCGTTTTTCTTCTT-----CTGCCAGCCTGCTTAGCAAAAAATAGGGAAGACAAATCAGCTAAATGTCATCGCCTC--AGTATATTTGAAGTGTCACATATTG ..:...:....:x:--.::...x....::.----------.:.:..:..:..xxxx.x........:----.::....x....:.xx.......:......-....x..x..---...x......:.......x...x:x..x.:.:.......:x::..:..:.x.....:......::.:.:..x....:.x:xx..:........x-......x.:....---..:.x.::.:x:..:.:.........x:..--::.:..x.x--....x...:....x..:...xx:..::...::..:.........:.x..xx...x..x:x....--------.x.x:x....xx.:----------...:x...x....:xx:::xx:..:x.....:xxx.x.:..x...xxx.x------..xx:..x.x...xx.:..x::..:::.:x.......-..x..x..x::.x...:x..x--------------------------------------.....------------------------.:.x.x.x.::x....xxx.x...:.:x....:xx..:.:x.x.-------.........x.:....:....---.....:.x...:::...xx.x:..................:.........:.:.x...x..:.........::.........:..................x::........:.:....:.....::.....x..........:x.x.:.xx.:x.:.x..x..:..........................:..:::---.................................x.........x:.x.x...::..:.....----:...::..:....................::.:.....:.-.:.........x.:..:-.............:..:..............x:.:.:..............--:....------------------........:.x.:.:........:...x......xx........:.x..:.....:x.....x............:.....x.....:..........x.......x....-----..:::x.:..-.:.xx......x......xx...x.x:x:....:..x:.:x.x...--::.:....x..:x..:.....:::. 14M2I14M10D27M4I30M1D10M3D94M1I13M3I30M2I9M2D64M8D14M10D50M6D37M1I21M38D5M24D44M7I21M3I197M3I62M4D40M1I17M1D51M2I5M18I111M5D10M1I46M2D25M 763/1061 71.9% 1109/94230402 0.0% 162/1061 15.3% 32641887 NA +7962 chr4 + 190214555 79059764 79059763 79060102 339 GAGATTCCCATGACCACATGGGTCTTGTCTCTTGTTTTGGAGCCCAGTGACCTCAGGCGTGAAGGTCAGAGGTCATCATGGTGTTCTGTGTACTTCCATTGTCTGCATCTTT-ACTCAGGATGGTGAAAAGAGTTATCATTGCTGGGGCCAGCCTTCATCTCCAAGGTAGGTTGATAGAACATCTGAACATGAATGATTATTATTGGTATATTTATGCTGAGTTCCAATGGAGA-ACAAA--------GTCTCTTTAAGAAATAGGCCTGACCATTAATATGACCATTATCATGATAACAAAGAGGATAGTTTAGGTTAAG-GAGCAGA-CCATCAAGGTTAGCACCCTTG chr4 + 94230402 46417614 46417613 46417929 46417614 46417613 46417929 316 GAGATTCCCATGACCACAGGGGTCCTGCCTCTTGTTTAACAGCCTGGTGGTCTGAAACATCAAGGTCAGAGTGCAGC-TATTGGTCTGCGTGC--CTATTGTCTGCGCTTCCAACTTAGGCTGGTGAAAAGGATAATCGTGTCT-GAGCCAACCTCTGCTTCCAAACCCACACCACTGGAAGCCTGTTCATGAATTATTA-CGGAGAGATGCTTATGCTGGGTGGCCATTTAGAGACAAGGAGGAGGCGTCTTTCTGCAAAGTGGGT------------------------------ACTGGGAGCAAAGTTTGGGTTAAGTTAGCTGAGGCATCAGGGTTAACACCCTTG ..................x.....:..:.........x:x....::...::..x.::.:.x..........xx..x.-.:x..x....:..:.--.:.........:::.::-...:...x..........::.x...:.xx..-.:....:...:::::.....:x:x:xx:x.:x.:.x::...xx.......x....-::xx.:x..::........:..xx.x..xx...-....:--------....:.:.:x:..:.:..:------------------------------..x::...x.x.....:.......-x...x..-x.....:.....:........ 77M1D15M2D17M1I31M1D55M1D33M1I5M8I19M30D24M1I7M1I21M 208/304 68.4% 316/94230402 0.0% 47/304 15.5% 32642150 NA +32910 chr4 + 190214555 79063770 79063769 79064235 466 ACATCAACTATCCAACTAAATATACCCTCTGAGG-AAAATTTATTCTTTGCACTCCTTTGCCTTTTTATTGTGATGAAAAGAAAAAAAAAACAACCAGAGATTCAACGGGCTGTAACTTTAATAGGTCATTCCAGCCAGTGCTTACCTTCACAAAATTCTGATAATACACGGAAGACAATACAGTGATCAAAAGCAGTGATGAGATTTTTTAGCAGCATTAACCGTCATGACCTAGCAAAATGAAAGAAAATGGTTTAACAGAACTGTCAGCTTCAATATAGCTAATAAAGGCATGGATAAATGTTTATTACATACCGGAGACAGATCATTTCTGTACAGAAATTGAGGATGACCTTTACTGATAACTCTTATCTGCCTAATATCCTGAGAGGGAGGAAAAGAGAGGGGTAAGAGAGAAGCATATTTACTGATATTTGTGAAAGG-----AGAAATTATCATTTGCAAATAA chr4 + 94230402 46420188 46420187 46420648 46420188 46420187 46420648 461 ATGTCAACTGAACAACTAAATATAACCCCGAAAGTAGAATTTATGCTTTTCACTCCTTCGCTTTTTTATTGTGGTGAGAAAAAAG---------CCAGGAACTCAACGGGCTGTAACTTTAATAGGTCATTCCAGCCAGTGCTTACCTTTACAAAATCCTGATAATACAGAGAAGACAATACAGTGATCAAAAGCAGTGATGAGATTTTTTAGCAGCATTAACCGTCATGACCTAGCAAAATGAAAGAAAATGGTTTAACAGAACTGTCAGATCCAATATAGCTAATAAAGGCATGGATAAATGTTTATTACGTACCGGAGACAGATCATTTCTGTACAGAAATTGAGGATGACCTTTACTGATAACTCTTATCTGCCTGATATCCT--GAATAAGAAAAAGAGAGGGGGAGAGAGGCTGCACTATTGCTGATATTTATGAAAGGTGGAAAAAAATTACCCTTTGCAGATGA .::......:xx............x..:.x:.:.-.:.......x....x........:..:...........:...:..:...:---------....::.:...............................................:.......:...........x:....................................................................................................x.:......................................:..................................................................:.......--..:x:..:............x.:::::.xx...:xx..:.........:.......-----.:......:.x......:..:. 34M1I50M9D293M2D56M5I22M 403/455 88.6% 461/94230402 0.0% 17/455 3.7% 32643582 NA +39708 chr4 + 190214555 79082812 79082811 79083377 566 TAGATTTC----CTGACTCCAGTCTCTATCCCTTTTAAACAGATAATTTAGAGGAGAATAAAAAATATTGA--AAATTAATGGCAATTTTGAAATAGAATATTTGGTCAAAATCAAATTCATTTCATTAA---------------ATGCTTGAGAAGAATGCAATGAGTAAATGAGGTATGAATAACTGTAAGATGGGACAATTACCACCTCAGAAACAATATATTTGTAAAGTTAATTCCTCTCGAACATGAACAATCCCCTTACACTTGACCCCTTTCTATTGCCTCTTCCATGCTTGAACTCTCCTTGAACTTTGAAGATCCATCTTGAGAGTATGATACGGCCATCTCTTTTGCATCTGGTTATTTTAGCTCCAATTTGCAGCCTT-AAATGGCAATTATGATGATATATTGCTCAAGTCACCCGACATGGATTAGTATCGGGATCAGCACATTTACGCACAGGAGTAGTGAATGGAGACTGCAGCTATGATTTTAAATGACTTGATTAATTCTGAAACAACATTTCAGAGTCCATTAGGTCCAGCAGGTGTTGGGGTGCAGACTATGCTTTTTCCGTAAGCAG chr4 + 94230402 46422612 46422611 46423191 46422612 46422611 46423191 580 TAGATCTCGTGGCTGGTTCTGGGCTGTGTGGTTTCAAAGAGAATTATTTCAAAGG-----AAAAACCTTGGTGAAATTAGTTGCAGTTTTAAAACAGAATATTTTGTCAAAATCAAATTTATTTCAATGAGGGGCAATCACTCTAATGGCTGAGAAGAATGCAAAGATTAAATGAGGTATGAATAGCTGTAAGATGGTACAATTACCACCTCAGAAACAATATATTTGTAAAGTTAATTCCTCTTGAACATGAACAATCTCCTTACACTTGACCCCTCTCTATTGCCTCTTCCATGCTTGAACTCTCCTTGAACTTTGAAGATCCATCTTGAGAGTATGATATGGCCATCTCTTTTGCATCTGGTTATTTTAGCTCCAATTTGCAGCCCTAAAACGGCAATTATGGTGATATATTGCTCAAGTCACCCGACATGGATTAGTATCGGGATCAGCGCGTTTATGCACAGGAGTGGTGAATGGAGACTACAGCTATGATTTTAAATGACTTGATTAATTTCGAAACAACACTTCAGAGTCCATTACATCCAGCAGGTGTTGGGGTTCAGACTG---CCTTCCCTTAAGCAG .....:..----...::..::.x..x.:.xx:..:x..:x::..x....x:.:.:-----.....:x...:--......:.x...:....:...:.........x..............:......x.:.---------------...x:..............x..x.................:...........x..............................................:..............:.................:................................................................:.............................................:.-...:..........:...............................................:.:....:..........:.............:..............................::.........:..............x:..................x......:---::..:..x....... 8M4I43M5D11M2I57M15I245M1I179M3D15M 495/558 88.7% 580/94230402 0.0% 30/558 5.4% 32660200 NA +3529 chr4 + 190214555 79084836 79084835 79084950 115 GGAAGGAAGAGAGAGAGAGAGAGAGAGAAGAAAGAAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAAAAGGGAAGGGAAGGGAGAAAGGGAAA chr4 + 94230402 12647117 12647116 12647231 12647117 12647116 12647231 115 GGAAGGTAATGAATGCAAGGGGGGGGGAAGAGGGAAAATTAATGGGAAGAAATTAAAGGAGAAAATAAAAATGGGAAAATAGGACAAGGTTGTGAGGGGAAAAAAAAAAAAGAGA ......x.:x..:x.x:..:.:.:.:.....::.....xx..x:.:......xx...:..:.:..x:...:x.::.:..x.:..x.:::xx.x..:.....:::.:...::..:. 115M 68/115 59.1% 115/94230402 0.0% 0/115 0.0% 66437719 NA +21259 chr4 + 190214555 79089194 79089193 79089718 525 AAATATTTTATCTGAAGCAGAATCTGACCTCAGGCATACAATATCCTTTGTTCACATTTCTCACTCTGCTCACCACTG--AAGTGGTGAATTTTAACACAAGAAGCTCAAGAAAGATGT-GCAAAATAGGGTATAGGGATATACAAATCCTTATTTTATTAACACTGTAAATTCTACTTCCTCAGAATTTCCAATTTTTCCCT--GCCTAGCAGCATAAAGACAGTTAAAGGGACTTTTGGTGACATTCCCCTTGTTTAATGAAGCTTGGATTTATGGGCAAGTGCCTTGAACTGCTGTTATTATCTGCATGAGTGAATAAGGGCTGAGGGTCCAGATCTGTGCAAAGAGTTCTACTGCAAATAGGCACATTGATCATTCATAATCAGACCTACCAGGTCAGCAGTGCTGCAGTGCCAGCAGGCTCTGAAAAAGCTGACCAAGGGAGCAGTAGTGCTCACAGGTTAATGTAATATTCAGGCAGAATAAGAT-----CTTTCTTATATACTAATCTCTTTGCTTTTTTTCTGGCAT chr4 + 94230402 46425790 46425789 46426311 46425790 46425789 46426311 522 AACCATTCCTTTTGAAGCCGTTCCTGACCTCAGGCGTGT------TTCTGTGCACAGCCCGCTCTCCTCCCACCCTCGCTAAGCAATGAGACTCTGCACGC-AGGCACAGCCCAACTGCAGCCACTCCACGCA-----ATACCCAAGTCGTCATATTATTTGTATTCCAAATCCCA-TTCCTCAGCACTGTCAATTTTTTCCCTGGCAGAGAAGCGAAAAGACAGTTAAAGGGACTTTCGGTGACATCCCCCCTGTTTAATGAAGCTTGGAGTTATGGGCAAGTGCCTCGAAGTGCCGTTATTATCTGCATGAGCGACTGAAGGCCGAGGGTCTGGCAGTGTGCAAAGAGCTCCGCCGCAAATGTGCACATTGATCACTGCTAATCAGCCCATCCGGGTCAGGGGTGCTGCCGAGACAGAGAGCTCTGCAAAAGCTGACAAATGGAGCAGTGGAGCTTGGGGGTTAATGTAATATTCAAACAGAATGAGGTATTCATTTTCTTACAAGCTTGTCACTTTTCCCTTCCTCTGACAT ..x:...::x.:......x.xx:............:.::------:.:...x....x::.x.x...:x.:....x::.--...:::...:x:.:x:...:x-.:..x..:xxx.:x..:-..x.xx:x:x.:.-----...:x...:..x.:..x.....x::.:.x:....:.:.-........x.:.x:........:..:--..xx..x...:x.....................:........:....:..................x................:...x...:.................:..x.:.:...:.......::.xxx...........:..::.:......:x............:.xx.......x..xx..:......x:.......x.x.x...x::......x..........x..x........:.x...::x:.................::......:..:.-----:.......:.x:..x:..x....x.::..::....:... 39M6D33M2I21M1D17M1I13M5D38M1D26M2I286M5I39M 368/512 71.9% 522/94230402 0.0% 23/512 4.5% 32663404 NA +3016 chr4 + 190214555 79127475 79127474 79127559 85 CCTTATGTAATGCCCTTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTA chr4 + 94230402 4618326 4618325 4618410 4618326 4618325 4618410 85 CCCTATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTA ..:...:.x:..x.:x.:.:...:...:x.x.::.x.......::............x..:x.:..::.:.:.x.x.:.:.:x.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 74509149 NA +3164 chr4 + 190214555 79127499 79127498 79127552 54 TCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...:...............:.:.:.:.:.:x..:...:...x...::..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 52549233 NA +3251 chr4 + 190214555 79127503 79127502 79127556 54 TTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....................:.:.:.:.x.xx..:...:...x...::..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 52549237 NA +3241 chr4 + 190214555 79132689 79132688 79132756 68 AATTGTTTTATGTTTTAATCTTAACTAATTTGTTTCAGTTTCCTTAGGTTTATTTTGCAGTTTTTTTT chr4 + 94230402 41595684 41595683 41595741 41595684 41595683 41595741 58 AATTGCTTTTGGTTTTAAT----------TTGTTTCAGTTTTTTTTGGTTTTTTTTTCAGTTTTTTTT .....:...xx........----------............::..x.....x....x........... 19M10D39M 50/58 86.2% 58/94230402 0.0% 10/58 17.2% 37537005 NA +3203 chr4 + 190214555 79135549 79135548 79135680 132 AAGTCCTCCTCCTCTTTTCTTTTTTTTCTTTTTTCTTTTTTTTTTTAAGAA--------------TAACTTCAGTAGGATTGGTACTAGCTCTTTTACATCTTGTAGAATT----TGACTGTGAATCCATCTGATACAGGCCC-TTTATTG chr4 + 94230402 68448595 68448594 68448741 68448595 68448594 68448741 147 AATTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTCCAGAAGCCTGAAGGACGTCCTACTTTTGCAGAATTAGTAGAAACCCTCACAGATATAATGGAGATGGGATAACTGGGG----GTTTTATACAGGTCTATTTACTG ..x.:.......:..x..:..:.........:..::.....:...:x....--------------:x....:x.:..:...:...xx.:.:..:x:.x..x.x:.:..:x.----.:....x.:----:.:.x.......:.:-....:.. 51M14I46M4I9M4D15M1I7M 86/128 67.2% 147/94230402 0.0% 23/128 18.0% 10686954 NA +8942 chr4 + 190214555 79152927 79152926 79153138 212 TTAGTTGTTGACAGCCTTCTTGGCTCACTAATTAGAACTGTAAAAT-TTCAGGTGAGTGACAGTAGCTT-AAACACTAATTCTGCTTTTT---------------------------GCAGCTGCAATCATTGGGAAGCTAATGGTATAATTGATGGATGCTGCCAGTTGCTGAAAAGAAGTGGAAATTAATACTTAAATTACCATTGTTAGAG------GTCATAATCACATTTTCAGTTGCATCC chr4 + 94230402 46435295 46435294 46435537 46435295 46435294 46435537 243 TTGATTGTTGACAGCTTCTCCAGCTTGCTAATTACAACTGTAAAATATTCAGGTGAATGACAGTAACTTGAAATGTTAATTCTGCtttttttttttttaatttttttttattattttGCAGCTGCAACTGTTAGTTGGCTATTGCTGTAATTGATGGACACTGGCAGTTGCT-CAGACAGATGGAAATTAATACTCGTGTTAC---TGTTAGAACTCGCTTTCACAGTCACGTTTTTATTAGCCTCC ..::...........:.:::::...::.......x...........-.........:........:...-...:::..............---------------------------..........:::..:.xx:....x..x.:...........::...x........-x.:.x.::..............::x:....---.......:------x...:.:....:....:.x.x..x... 46M1I22M1I20M27I55M1D30M3D8M6I27M 161/208 77.4% 243/94230402 0.0% 39/208 18.8% 32717632 NA +3198 chr4 + 190214555 79157501 79157500 79157547 47 ATATGTATGTATATATACATATATGTATATGCATGTATATATACACA chr4 + 94230402 27759113 27759112 27759159 27759113 27759112 27759159 47 ATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACA ........x..:.x.:......:................:.::.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 51398388 NA +31608 chr4 + 190214555 79164893 79164892 79165387 495 CTGGTGTTATAGCTGGGG----AACAACTGCCTAATGTCTTTCAACCGGATTGTTTAGCAAAGCTTCATTATGAACGTAATTGTGTGCTTGCACAGGCACACCACACGGAGGGAACACTCACAG--TAAAGGTATGATTGTATTGCCTGCTGCCATGCCAATTACTGGATATTAATGGCAGGATGGCATGCATATGCCGGAGCTGGGAAGCAGAAGGTTAATAGACAAACAGCACCAGAAGAGCCCATTTATCAGTTTCTATTTATCTCTCCTTGGGAGGTGGCAGGTTTACAGTAAATACCTTCTGTCCTCCTAATTTCCTAATGATGGGGATAATGATGGAGAATGGTGAAGTCATTAACTGGGACAGGCTCTGTGCATCACTCTGTCAACCACATCTCCCCAAGACCTGCAATGAGAAGTGATGGGCCCCAGCTGTTCACCAGAATCTGAGCCCCTCCTCCCATCCCC---TCCACTCTAAACTGCAGGCTTGGGAAATGG chr4 + 94230402 46437280 46437279 46437775 46437280 46437279 46437775 496 CTGACCTCAGAGCTGCAGTGTCAGCAGTTGCTAAGGATCTCTCCACTAGCCTGCTCAGCAAAGCTTTGCTGTCAATATAGTTTTGCTCTTGCAT--GCA------GTGCAGGAGATGTTCATGTGCTAAAGGTAGGATTGTGTTGCCCACTGCTATGCCAATTACTGGATATTAATGGCAGGATAGCATGCATATGCCTAAACTGGGAAGCAGAAGGTTAATAGACGAACAGCACCAGAAGATCCCATTTATCAGTTTCTATTTATCTCTCCTTGGGAGGTGGCAGGTTTACAGTAAATACCTTCTGTCCTCCTAATTTCCTAATGATGGGGATAATGATGGAGAATGGTGAAGTCATTAACTGGGACAGCCTCTGTGCATCACTCTGTCAACCACATCTCTCCAAGACCTGCAATGAAAAGTGATGGGCCCCAGCTGTTCACCAGATTCTCCTCCCCTCCCCCTCTCCCCATTCCCAACCCCAGTTGCAGGCGTAGCAGTTGG ...::x.:.x.....x:.----.:..::...:x.:x:...:..x..::.x:..:.:..........:::.:.x..::..:..x..:x......:--...------::.x...::.:::...::x--........x......:.....::....:..............................:.............x:.:........................:...............x...............................................................................................................................x..............................:................:............................x...xxx.......:..:x.....---:...x:.:x.::.......x.:.x.:x... 18M4I72M2D3M6D19M2I345M3I30M 408/487 83.8% 496/94230402 0.0% 17/487 3.5% 32727613 NA +3023 chr4 + 190214555 79166740 79166739 79166811 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTGCAACCTGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x::..xx....::.:..x.xx::.:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 3133534 NA +3608 chr4 + 190214555 79167188 79167187 79167252 65 TATATATATACATACATATATATACATATATACACATATATGTATGTATACACACACACACACCC chr4 + 94230402 47135177 47135176 47135241 47135177 47135176 47135241 65 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACTC .:.:.....:......:..:x..xx:.x...::....:.....:....:........:.....:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 32032011 NA +7428 chr4 + 190214555 79174629 79174628 79174874 246 GCATCAGCTCATTTAGCAGTTGCCTCCTTAGCTTTGAAACATCAACTGTGACATAAATCAAGATGTACATTAACAAGGATGGTATAAAACATCTGT-GAATTCTAAATAAGGGAAAATCACATTAGTCACCATGCAAACAATGTGTATGATAATTTACATAAAGGCAGGAGGTAGCCAGGAACTCAAACAGACCAAAGAACTGAAATAGACCTCTTATCCGAATGCAAATAGTATACAAAAGGAACT chr4 + 94230402 46439412 46439411 46439650 46439412 46439411 46439650 239 GCATCAGCTGTTTCTGTGGCCAGCCTCTCAGCTTTGACACCTCAAGCATGACATAAATCAGGCTAAACAG-AACATGCA--ATATTAAACATCTGTTGACTTCTAAATAAGG-AAAATCATATTAGTCACTCTGTAAGCAATCTGCATGATAATTT-CAGGAAAGCATGAGGTGACTGCTCTCTCAGA-GGAAGAAATAGCTG--ATAGATCTTTTCTATATATGTGAACTAGCTGTAAGAAAGACT .........xx..:x.::.:::x.::..:........x..x....x::............:.x.:x...x-....x.x.--:...x..........-..x............-.......:.........:x..:..:....x..:..........-..x:..:...x.....::.::xxxx....:.-:..xx...x.:...--.....:..:..x.x::x...::..:x:xx.::..:.:::... 70M1D8M2D15M1I15M1D43M1D31M1D14M2D42M 165/238 69.3% 239/94230402 0.0% 9/238 3.8% 32735217 NA +8244 chr4 + 190214555 79175505 79175504 79175998 494 AGCAGTTTGTTTCATCTATAATTTGCGCTGTATAACAATGAGAATGATATTCTCGTTATTCTTGGTATAACAGG-CTGTTCCTATCCTTGCCCCCATTAACAATAAAAACCCATGCAGTTTTCAGCCATTATCATTTTTCTCCT--------------------------------GATAAACCATCTGTGACATGGAGACCTTGAAGCCGGGAGTTCTGGCCACAATGCTCAATAGACTATGCATACAGCTTTTTCAGAGGTAATCACTGTAAAAAAAAAAAAAAAAAAAAAGATACCA-GCTCCAGTGTTATTCTTCTCTCTTATAAGTTTTGTTTTGCTCCTTTTTATACATCTAATGTAATGTGAGTTCACATG--AATTCAGCCCAAGGCATTTTGCCTGACAATAGAAACTACATCTAAGGCTAGTGCTTAAGTAGGTGCTAGAGCTGTCTTTTCCCTTAATTCCAGCTGCTCTTGATGCTATATTTAATGCAATAACTAGAAGGAAAATGTTCTCACTACAGA chr4 + 94230402 46440811 46440810 46441272 46440811 46440810 46441272 462 AGCATTTTGTTTGGTCTTT-------------CTACAATCACAGTGATATTTTCATTACTCTCAGTTTATCCTTTCTCTTTTTTTCCTTGCTCCCACTTGCACTGGAAACCTATGTGGTTCTATCCTGTTAACATTTTCTTCCCCTTCCCCTTTCCCTTTTCCTTTCTTTTTCTCAGATAAACCA---------------CTTTGAAGCCATGAGTTGTGGCCACAGCCCTCCGTAGACTCTACATAGAGTTTTCCAGGGGTCAAGTGCTGTAAAAAGTCATCA----------ACACCATGATGCAGAGTTATGACTGCCTATTCGGGGTTT----------CCTCTTATTCCCATAATGGAACGCATCTCCACATATTCAATCAGCCACGGTTATTCTGCCTGGCTACACAGACTGAAGCTAAGATGCACACTGAA-----------------CATTTCTGTCACTTTT-GCTGTTCTGGCCACTATGCTTATTCAAAGAGCTGGAAGGAAAA--CTCTCATTAGAGA ....x.......x:...x.-------------:x.....x.x.:.......:..:...:...::..x..x.xxx-..x..::.x.......:....:.x:..x.::.....:...::...:.xxx.::...x......::...:--------------------------------.........---------------.:........:x.....x........::x...x:......x.:....x..:...::x:.:.x:..x::.........:xx.xx.----------.:....-.x.x...x.....xx:.x:..x..xx::....----------.:.:....x.x:x.....x..:.::xx.:.....:--x.x......xx:.x:...:......:.x.:.x.:...:x.x.....::xx:::..x..-----------------.x....:x.:.x..::-....:...x.x::....::...x.xx..x.:..:.........--:.....:..x... 19M13D42M1I69M32I9M15D84M10D6M1I32M10D35M2I58M17D16M1D43M2D13M 280/426 65.7% 462/94230402 0.0% 104/426 24.4% 32734694 NA +17542 chr4 + 190214555 79185646 79185645 79186027 382 TCTCTCATTTTGTAGATGTGGCTTTAATTTGAAGCAATATGGTATTCTCTCCCCACCCCATTCTAACT------------------------AAACAAACTCTGTAAGAATTAGCTTTGAGTTATTCCATCTGTGGACTTTTAATTTTGTCATAAAAACACAGAAGCCTGGCAGGAAACTC-TTTCCAACTGGCTACATGTATCATCTTGTCTGAAAGCTGGTTAAGTAAGTATGGCATTTAGAATGAAATTAAAAAAAAAAAAACTTCATTTATGGAACTAGTTCACACGAAGTGTTTGCCCACTTCTTTGACCATCTGTTTATGTTGACAACCACCGCCCCACATTGTGCCAAAGTGCCCTTGGCTATTAAAAACAGTGT---TTTGTGTGTGAGT-------------GGTATGTGTGTC chr4 + 94230402 46447793 46447792 46448191 46447793 46447792 46448191 399 TTTCTCCTCTTGTAGTTGTTGCTTTAATTTCCTACAATATGTTATTCTTGTT-------GTTTGGAATCATGGGGAGGAGGGAGAGAGGGGAAACCAACCTGTGTAGAAATTAGCTTTGAGTTATTCCATCTGTGGACTCTTAATTTTGTCATGAAAACAGAGAAGCCTGGCAGGAAGCTAGCTTTTGACTGGCTTCATGTATCCTCTTGTCTGGAA-CTGGTTAAGAAAGTGTGGCATTTAGAATG--------AAAGCAAAAGCTTCATTTCTGGAACT--------CTGAGTGTTTGCCCAATTCTTTGACCATCTGTTTTTGTTGACAGCCACCTCTTTGTGTTGTGCCAAAGTTATTTTGGCTTTTATAATCtgtgtgtgtgtgtatgtgagtacatggtggtgtggttgtgtgtgtC .:....x.:......x...x..........xxx:.......x......:x::-------:..:x:.x.------------------------..x...x..x....::...............................:.............:......x................:..x-:..:::.......x........x.........:..-.........x....:..............--------...:x....:........x.......--------.x:............x..................x........:.....x.::::::............xx::......x...x..x.x....---.x...:.......-------------.x.:........ 52M7D9M24I89M1I35M1D29M8D26M8D93M3I13M13I12M 292/358 81.6% 399/94230402 0.0% 65/358 18.2% 32737853 NA +13208 chr4 + 190214555 79187157 79187156 79187646 490 TGTTTTATCATCAATTGCTTTAGAATTATTTCTCAGAGCCCGAGTCTGGGCTGAATAACAGATATCATTTCTGACAGCTGTAAAGTGAGGCTAACGAACATCCCAATGAGGATGTACCATGCCAGGTTCATCCATCCAGCTGAATTTGTATTGTGAGTGC-AAATAGCTGCATGTCATGGCCCACTGC---TGCCCAGGGCTGGAGTCATTTATTTAATAACTCAGTTCACAGGCATTACAGGGGAAC--TGTAGCATTTCATATTATTCAAGACAAATAAAAAATCAAAAAATTTTA-CATGGAGAAAAGT-AACATTTCAGTTCTTC----CCATTGACTGAGGCTGTTTAAATACTAACCGTGACAGTTAGTCCTGAGGTATAAAACATTAACAATTTATATTAGGTTCGGAAACGGTATCTCCAACTGTGTCATTTGATGG----------CATGTAGTTTTTCTTTGGGTTTATTGGAGAGGAA--TTTT----AAGATGTGTTTATTTCTCT chr4 + 94230402 46448895 46448894 46449389 46448895 46448894 46449389 495 TGTTTTCCTAGCACTGCCTTCAGAACTCCTGCCTGGCATGAGAGTA-GGCCAGAATAACGTGTATAGCCCGTGACAGCAGCAAAATGAGGCTAACAAATATCCTACTGAGGATGCGGTTTGACAGCTTCATCCATCCAGCTGAATTTGCATTGTGAGTATGAAATAGCTGCGTGTCATGGGCCACTGCCATTGCACA------CAGTCATTTATTTAATAACTCAGTGCACAGACATTAAAGGGGAGCCATGCAACACTTCATTTTGTTGAAGACAAATAAGAAAGCTAGAGATGCCAGCATTTAGAAAAGTCGGGGTTGCACTGTTTCATCACCAT--AC--------TTTTAATGTTCAGTCAGGCAGT---TCTTCAGGTGTGAAATGGATCAAATTTTTATTAATAAAGGTGAAGGCAT---GGGCTGTGGTATGTCACAGGCTGTTTCCCCATGTTGTTTTCCTTCAGGCTGAATAAGAAGGTAGGCTTTGAGAAAGATCAGCTTATTCCCTT ......x::.x..x.xx...:....:.x:.x.:::.x::xx....x-..x.x.......:x:...x::::x.......x.:...:..........:..:....:.x........::x:x..x...x......................:.........::-..........:........x.......---...x..------x.......................x.....:.....x......:.--..:.:..:.....x..:..x...........:...x.x.:.:..x::.-...xx........-::x:..x..x.x:...----....--..--------...x...::.x.x:xx.:....---..:.x....:.:...::xxxxx.....x.....:xxxx..x:.x..:..---x::.....x:..x.x.::.----------.....x.....:...::..:.x.x.::::...x.--:...----.....xx.:.....:.::. 46M1D113M1I27M3I6M6D45M2I48M1I13M1I16M4I4M2D2M8D22M3D49M3D19M10I34M2I4M4I19M 328/467 70.2% 495/94230402 0.0% 51/467 10.9% 32738262 NA +3005 chr4 + 190214555 79196937 79196936 79196998 62 TTTGGAAGATGAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAA chr4 + 94230402 38128969 38128968 38129030 38128969 38128968 38129030 62 TTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAA ...x.x.:x.::.....:...x.....x.:...:......x...:.:.......:x...:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 41067968 NA +3088 chr4 + 190214555 79196948 79196947 79197018 71 AAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAGGATTCTGTCCCAG chr4 + 94230402 1046819 1046818 1046889 1046819 1046818 1046889 71 AAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAATCGTTTTCATTTTAG ...:.....xx.......:......:........xx:.:...:..::.:..:....xx.x..:::.:::.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 78150129 NA +3239 chr4 + 190214555 79209906 79209905 79209975 70 CGTGGTGGCGCACACCTGTAATTCCAGCTATTTGGTAGGCTGAGGTAAGAGAATCGCTTGAACCTGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:....:--....:.........:...:x........x:xx.x...x.:........::.... 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 3176709 NA +15184 chr4 + 190214555 79211604 79211603 79211834 231 CTGTTCTCCTCCCTATT-CCCCACCCCCCACAAGCTGGAGGGCCAGAAGGTGGGGCGGTACCTCAGGATAATGGCAGCAGAAGGCAAAGGGAGCAGACAGCTGGCAAGCTCTGTCCCAATATGCTTCCCTGAAAGAGGCGAGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGAACCAAGGT-AAATTCCTTAGAATGTCATCCATTTTAA chr4 + 94230402 46454817 46454816 46455049 46454817 46454816 46455049 233 ctctcttcctccctctttcccccccccccCCAAGCTGTAGGGCCAGAAGGTGGGGTGGTACCTCAGGATAATGGTAGCAGAAGGCGAAGGAGGCAGACAGCTGGCAAGTTCTGCCCCAATATGCTTCTCTGAAAGAGGCAAGGAAAATGCAGAAGATGTGATGCCTGAATGGCTCACTTTGCAGCAAAAGGGAAGATTAAAAGTAAAATTAGTTAACATCTTGCTCATTTCAA ..x.::........x..-....x......x.......x.................:..................:..........:....::................:....:.............:...........:......x.x.........::........................x....x:.....x:x..:..-.....xx...:x..x.::::.....:.. 17M1I186M1I28M 194/231 84.0% 233/94230402 0.0% 2/231 0.9% 32756787 NA +18333 chr4 + 190214555 79216920 79216919 79217233 314 CATATGCATATCTGAAATTCAAATTGAGTGCACCTTACCTCATGC--TCTCCTCCGTACCTCTAATGAGGTGGAAAAATG------TACATTAATGACAGAAAGTTATTTAGTGCTGAACAGAGTTAATTGCTTCTAATCACTGCTTACATCCATGTGGTTTTATGGTAGACAACAAACCTCTTCATTGGGTTTGCTCATTAGACATATTGTAAATCACAGAGATGCACTGGCATCTTGCATATTGTGCTTCTATTAGTGAGGCAGCATTTTCATATAGCC--------CCAGTGGCAGGCTTTGGGATGCAGATCAACTT--GTCTGTGTT chr4 + 94230402 46456960 46456959 46457291 46456960 46456959 46457291 332 CACATGAGTGTATGAAATTCCTATGGAGCCTGCCTTACATCATATATTTTCCTGTGTACCTCTAATGAGGTGGGGAAAAAAAGCACCACGTTAATGATGGAAAGTTATTTAGTGCTGCATGGAGTTAATTGCTTCTAATCACTGCTTACATCCATCTGGTTTTATGGTAGACAACAAACCTCTTCATTGGATTTGCTCATTAGACATACTGTAAATCACAGCGATGCTCTGGCATCTTGCATATTGTGCTCCCATTAGTTGGGCTGCATTTTTGTAGAGCTGGGAACAAAGACTGGTAGGCACTGGGAAGTGGATGGATTTCAGTCTTTGCT ..:...x:.:.x........xx..x...:x::......x....::--.:....x:..................::...x:------:..:.......::..................x.::..................................x..................................:.................:............x.....x......................:.:......x:...x.......::..x...:--------xx.x...:....x:.....x.::...x:.:..--....x..:. 45M2I33M6I195M8I32M2I9M 257/314 81.8% 332/94230402 0.0% 18/314 5.7% 32759960 NA +3312 chr4 + 190214555 79218987 79218986 79219037 51 TATAATACATGATATATAACATATATACACATGTAAATATAGAATTAAATC chr4 + 94230402 59005993 59005992 59006043 59005993 59005992 59006043 51 TACAATACATAATATATTACATATACACATATGTAAGTATAAAAAAAAATC ..:.......:......x.......:...:......:....:..xx..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 20212994 NA +3053 chr4 + 190214555 79222103 79222102 79222171 69 GGAGAGTGTATGTGTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT ....::.x.:.:..:...:...:......x.......:....x.x::..:.x:...:.xx.x....:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 1375339 NA +3026 chr4 + 190214555 79223627 79223626 79223674 48 CTAAAACTTAAAGTATAATTAAAAAAAAAAAAAAAGATTTCTCTACCA chr4 + 94230402 12825426 12825425 12825473 12825426 12825425 12825473 48 CTAAAACTCATGGCATAGTTAAAAAAAAAAAAAAACATTTTTGTATCA ........:.x:.:...:.................x....:.x..:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 66398201 NA +11450 chr4 + 190214555 79253868 79253867 79254230 363 TTTGTCAAAATAGATGAGCTTTCTGTCAGGAGGGAAGGTAGTTTTTCGTTGACATCTTCATTAGAA-TCAGTAGCATTGAATAAGAATAGCTTCAGATTCCCTTTTTTAAGACAAACATAAATAACTTCACAGGGCATGCTCTGCCTCACATAGATTTCCAGGAATCTAGGCATGTGGCAGGAGTGGCAGGCCTGCCACCCAGTGTAGCTGGTTCTGTGTGATGGATTGGTGAGCTTTGATGAATGGCCTATGCCAGGCAGCACCATTAGAGCTGACTCACTCCAGCAAGATTAATTGTATTAGATTGTACAGACATCTTTCAAGAGGGAAGCATTTCTGTTTATCTATCGCATGTCCATCACA chr4 + 94230402 46458954 46458953 46459305 46458954 46458953 46459305 352 TTTGACAAAATAAGCAAGCAGGATATTAAGAAGGA---TATTTTCTTCCTGATGTCTTTATAAGAAATCAGTGG---TGGTTATAAGTGGTTTCAGCTCCTCTTTTTCAAGCCAATCATAAATAATTCCCTGGAG---GAGCTACCTTGCACAGCTTCAGAGGTGCATTGTCATCCACTAATCATGGCAGCTCTGCCAAACTGTGT--CTGGTGCAGTGTGATGGATGGATGTGATTTGATGAATGGCATATGCCTGGGCACGCTATTAGAGTGTATTCACTTCAGGAAGATTAATGGTTTCAGGTTGTGCTGGCATCTTTCAGGACTCAATGTTTTAGGTTTATCTATC-CATCTTCCACACA ....x.......::::...xxxx.:.:.:..:...---..x...:.:x:...::....:..x....-.....:.---..:x..x:.:.:.:.....x.:.:......:...x...x.........:.:.x::.:.---.xx..:...::..:..x..:xx...x::x.x.x...x::x:.:xx:......x:......xx.x....--.....x.x...........x.:..x.x.............x......x..xx:.:.:.......:xx.:.....:...x.........x..x.:..:....:.x.:.........:..xxx..xxx...xx...........-...x.:.xx.... 35M3D28M1I7M3D58M3D68M2D142M1D13M 240/351 68.4% 352/94230402 0.0% 13/351 3.7% 32794914 NA +11553 chr4 + 190214555 79266050 79266049 79266328 279 GGGTGGCTGTCTATGCCACTGTACACATAACTCTCTCCCACCCACCTGCCCTCAT---ATCCCCACTTCTCCTTAGCATCCATTACATTGGCATTCAGTTTTATAACAGAATGTGGGACTTGCAGGGCCTCTGCCAAAGCCCTGCACATCCAAAGTCATTTAGTGAAGGAATCCATTATGATCGGCACTCGCAGAGATAAATCCCCCGTGATGGAGGCAGCTCACTCACACAGAGCAGTAGCTCTCTTCCTAATGGCATTCTGCTCTGCTTGGCAGGCAACC chr4 + 94230402 46460603 46460602 46460870 46460603 46460602 46460870 268 GAGTGAATTCTTCTGCTTCTGCATGCAGGGCTTCCGAGAGACCGCCTGCACTGATGTGATGTCCCCGTCCCCT--GCTCCTATTACATGGGCATTCAGTTTAATAATTG--TGTGAGGATGGCAGACCTGCTGCCAAAGCCCTGCGCATCCAAAGTCATTTGGTGAAGGAGTCCATTATGATCATGGCTCGCAGTGATAAATTCCCTGTGATGGTAGCAGCTCAC--------AGCAGC--CTCCTCTCATAATGGCATTCTGCTCTTGTTGGCAGGGATCC .:...:x.x::.x...:x...:.::..x::..::.xxxx:x..:.....x..x..---..x:..x.x..:...--..x:.:.......x............x....:x.--....:.:x.x....:x.:x...............:...............:........:............:xx:.......x.......:...:.......x:.........--------.....:--...:::..x.................xx........x.x.. 55M3I15M2D34M2D114M8D6M2D41M 198/265 74.7% 268/94230402 0.0% 17/265 6.4% 32805447 NA +3104 chr4 + 190214555 79272079 79272078 79272141 63 CACATATATTATATGTGTGTGTATATATACATATATACTATGCTATATACACAAATAAGGCTC chr4 + 94230402 39524137 39524136 39524199 39524137 39524136 39524199 63 CACGTATATGAGATGTGTGTGTATATATGAATATATACAATTCCATACAGGTGCATAATTCTC ...:.....x.x................:x........x..x.:...:.x:::x....xx... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 39747942 NA +42858 chr4 + 190214555 79273824 79273823 79274414 591 TCTTTCATCAGGCTATTTGCAAGTCCCTTGCTTCTTCATGTCAGCTGCCCTTGGCTGCAAGATAGCCATAAAACATTTACTGCAAAGCCATGAAGAATCCATATGTCCATTTGATGTGTCAGGCCACCAAGAAGCCAGAGCTTGTGGGGAAGCATAAGGATATCTGAAGGTGACACATGCTGTCAGTTGATGAACAGAGATGCAGAAGGGAATTCTGGCAGCCTCTATCTTGGCCTTGACAACTTGTGATGGTGACCAGGTGGGGTGTGTTATCTTAATAGTCTGGAGCTCTTGTGAATTATTTGCTGATAGATGTAAACAGCTGTTATTCTTGGTAATGGAAAGCAATTAGAAACATCTGTACTCTTGGCTATGAGTAATGCCTCCTATCCTCACTGCTCCCAAGTGCCAATTGGAAATAACTACATCATCGGGATGGTGTTGGCAATTCTACACTGCATTATGGGCTGATGATTACTACTGAGCTGTGAAGAACAAGAGGTGAAGTACAGGGGGGAAAGGCTTTACCTGAAAT---------------------TTATGAAGCAAGAAG-GAAAACTTACTGCTTTATCTGGGTAACAGAAGGCAAGCACT chr4 + 94230402 46462094 46462093 46462704 46462094 46462093 46462704 611 TTTTTCACGGGGTTATTTGCTAGTCCCTTGCTCCTTT-TGTCACTTGCCCTTGGCTGTGGTATAACCATGAAACATTTATTGCAAAGCCATGAAGAATCCATATGTCCGTTTGATCTGTTAGGCCACCAAGAAGCCAGGGCTTGTGGGGTAGCATAAGGATATCTGAAGGTGACACATGCTGTCATTTGATGAACAGAGATGCAGAAGGGGATTCTGGCAGCCACTACCTTGGCCTTGACAACTTGTGATGGTGACCAGGTGGGGTGTGTTATCTTAATAGTCTGGAGCTCTTGTGAATTATTTGCTGATAGATGTAAACAGCTGTTATTCTTGGTAATGGAAAGCAATTAGAAACATCTGTACTCTTGGCGATGAGTAATGCCTCCCATCTTCACTGCTCCCAAGTGCCAATTGGAAATAACTACATCATCAGAATGGGGCTGGCAATTCTACACCGCATTATGGACTGATGATTAGTACTGAGCTGTGAAGAACAAGAGGTGAAGTGCAATAGAATGAGCTCCTACCTGCGTTTGCTTGTTTGTTTGCTTCCTCTTTTGGAAAAAGTAGAGGGAATTTACTGTTTTCTCTGTA-AAGAGGAGCAAGGCACT .:.....:x:..:.......x...........:...:-.....x:............:::x...:....:.........:............................:......x...:..................:..........x...................................x........................:............x...:...............................................................................................................................................x...............:...:........................................:.:....x.:..............:.........:..........x..............................:..:x:.::x:..x:::......x:x.---------------------..x..:.:x...x..-.::..:......:...x....x:-..x..:..xx.:..... 37M1D497M21I15M1I23M1D17M 521/589 88.5% 611/94230402 0.0% 24/589 4.1% 32811730 NA +3286 chr4 + 190214555 79281857 79281856 79281929 73 AGGCTTCTAAAAGCCTAAAACAAAACAAAATAGAACAACAACAACAAAATAAGG--CAGGTTGGACAAGCTCTAG chr4 + 94230402 80206910 80206909 80206984 80206910 80206909 80206984 75 AGACTATGAAGAGTCTACAGCAAAACAAAACAAAACAACAACAACAAAAAAAGAACTGGGTCTCCCAAGTTCTGG ..:..x:x..:..:...x.:..........:.:................x...:--::...:xxx....:...:. 54M2I19M 53/73 72.6% 75/94230402 0.0% 2/73 2.7% -925053 -93305349 +17652 chr4 + 190214555 79285475 79285474 79285878 404 TCACTATTGTTAAATGCACTTCTGA-AATTCAATTGCAAGAG-TATTACAATACCTTGTAATTATGCAGACTGACTAGAGTTAAAGACTTTGGAAATTAATTTTGAGTTGAAATATTAAA--TGAAGTAGAATGTTTTATCATAATGGCATAATTTAAAACTAACTAAAAATAGCATTAATAATAATCATGATCACTCTCCTTTCATTAAAAGAAGAGATTTAGTACTAAATTATTAAATGATCAAATTTACGGTGCCCAAGTTAGTAAAGATTTTCTAGTAGTGTAAATCATGCTACATGATTTCTGTCTCATGACTATAGCAAATTAGTCACTATAGTAAATTTTAGAGGCTGTTAATAATACAAACACTTCAATGTTGGAAGCTTTGGTAGAATGATACTGCATG chr4 + 94230402 46463358 46463357 46463757 46463358 46463357 46463757 400 TCCCCATTATCAAGGGCGTTGTAGAGAATTTGCTTGTGATAGATGCTACAGTACTGTGTAAT-----AGTATGGCTGAAATTGAAGACTTAAAAGATTAATTTTGAGTTGGAATATTAAAAATTAAATAGAATGTTTTAGCATAATGACATAACTTTAAATCAACTAAAA-TGGCATTAATAATAATCACGTTAACTCT--TTTCATTAGAATAAGAAATTTAACGCTAAATTATTAAGTGATCAAATTTATGAGGCATGAGTTAGTAAAGATTTTTTACCAGCGTAAATCATGTGACGTGACTTCTGTCCAGCAACTGCTGCAAATCAGCAACTGTGTTAAGCCCTGGAGGGCATGAATAATGCAAACATGTTGGTGCTGTGACCATTGCCAGAATACGGCTGTTTG ..x.:...:.:..:x..::.x:x..-....::x...::.x..-.::....:...:x......-----..xx..:..::.:..:.......x::.:...............:.........--.x..:............x.......:.....:..x...::........-.:................:.x.x.....--........:..x....:.....:::............:............:.:x..x::................:..x:..:..........:x..:...:.......:x:::...::x......:..:x...:.:x...::::.:....x::.x......:......:x.:::..:..x:.x.x...x:.....:xx:...:x.. 25M1I16M1I19M5D53M2I48M1D28M2D207M 287/396 72.5% 400/94230402 0.0% 12/396 3.0% 32822117 NA +3026 chr4 + 190214555 79287659 79287658 79287717 59 ATGTGTGTGTGTCTGTGTGTGAGTGAGAGAAAGAGGGAGAGAGAGAGAGAGAGAGAGCA chr4 + 94230402 41511097 41511096 41511155 41511097 41511096 41511155 59 ATGTAATTATGACATTGTGAGGGTGGGAGAAAGACGAAGAGAGGGAGAGAAAGAGCGCA ....:xx.:..x.xx....x.:...:........x.:......:......:....x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 37776562 NA +5649 chr4 + 190214555 79288067 79288066 79288424 358 AAGTAGCAGGCTTACAGAAGGAGACACTCTCAGCAGAGGGAACTGGTGCAGAAGATTCTCTTTCTTCTCTTAGTAGCTTTCGATAGGTCAGCAAATCAGAATTGTTTGCTGTTTTCCTTCTTTCCCCACTGACACCTCATTACAGAATGGGGTG-----TTTTTTCCCCCAGTCT---GTATTAGCAGAAACAGAAAAGTAATTAATACATAAAGTACCAAATATGAAATATTACTCTGCACAGACGCATTTCACACTTCA-TTGATTTCATGAGTAGGCCAGAGGTGCCAGAACAATAATTAATATGTTGTAAGAAAAAAAACATTATGCAAGGTCAGCAGCATTTGAAGACTTTACAAGGAAGAG chr4 + 94230402 46464843 46464842 46465164 46464843 46464842 46465164 322 AAGAAGCATTAGCACAGATGAAAATCTTTCCAGCAG--GCAGCTGAAGAAGAGG------------CTCATATTTACTT-------GTCAGCAGAGCAGTA--GGCTACTTTTCCTTTTCTTGGCATGCTGGGTCATTCTCACGGGCTGTGTGGATAAATTCTTCTCCCCACCCCCAGAAATGAGGGAAAGCTGAGAAATAATTA-CAGATAAGGTCAAAAATATGTGATAAAGTTCTGTAGAGAC--ATTTCTTTCTTTAATTGGTTTTAGGTGTAAGTT-TAGGTGCCAGAACAATAATTAATATGTTGTAAG----------------AAGGTTAGTATTGTTTTGTGGCTTT--AAGGGAGAG ...x....xxxx:.....x.:.:.:x:.::......--.x.:...:x.x...:.------------...x..x.x:...-------.......:.x...x.--.x:.:..x..::::.....xx.x::...:xx.x.:x.:..:.:x..x.xx.-----..:..::.....x:.:---:x..x..x::..:.x..:..:......-:.x....:..xxx.......x:...xx::....:.x....--.....x:x...:.-...:...:.x.x...:.::-x................................----------------.....:..:.x::...x:x.:....--....:.... 36M2D16M12D13M7D15M2D51M5I16M3I27M1D40M2D13M1I19M1D33M16D25M2D9M 208/313 66.5% 322/94230402 0.0% 54/313 17.3% 32823224 NA +17859 chr4 + 190214555 79292458 79292457 79293009 552 TAGAGTAAACCAGGGGTAGAGGACCAATCTGATTAAATCTAACAATTTGTACATCTGTGCCTGAC-------TTTCATCACTTCT--TATGATTGCGTATAAAGTACCTGCTGTTGAATGAGGGATTAAGCCCATTCCAATTATTGATGCTTTTTAACTTTACAGATGTCA----AAGGCATTCCTTCAAACCTGTTCATTTCCAGAGCAAGGCTTTTCCAGATGGGAATTAGAAAGCAAGATTTGACAAAATCTGCTTCTCTGTTACTCAGTACAAAGGAATATTACAGTAACGCTCCCATTTCTGTTAATCCATTCATTTCAGGTTTGATTTACCTTTTTTGCTTTGATCTAAAAATCTCTGTGGCTTTATAGGATTATATGTTGCTATATTCAGGTTTTGAATGAATCACACTGTATGCATTTTAATATGATTTCTCTGACTCCAAAGCCAGGATTAACCTGTTGTTTTTGATTAAAAAGATGCTATGTCTAGATTTCAGAGGAGTGTTAGATTTCTCTGCTTATCTAC-TGTTTTTCTTCTT-TTTAAATAGACAAAAGAAAT chr4 + 94230402 46465773 46465772 46466312 46465773 46465772 46466312 540 TAGTATAGGTTTGAGGGAGGAGCACAACCTTACTAAATCA--------GTTCAGCTATCCCAAATATTGTTTTTTGATCAGTGCTACTGTGATAGCCTGTGAAGTACCTGCAGCTGGATGAAGGATTATGATGAGCTC--TGATTGCTGTATTTTA-CTTTACAGATGTCATAAAAAGACATTC-TTCAAACCTATTCATTCCTCCAATGCTGCTTTTCCAGATGGGAATTACAGAGCAAGATTCAGAGAAATCTGCTTCTATCTTATTTAACAGAAAATAATATTACAGTAAC--------CTTTTCTAATCCTTTCATTTCAGGTTTGATTTACCTGCTATACTTTGATC-AGAAATCTCTGTAGTTTTACAGGATTAGATATTTTCATGTCCAGTTCTGGAATG-ATTGTAGTTTATAAGATGTTCTATGATTATTATATTTTGAAATCTAGGATTAACCTGTGATTCTTGATTAAAAAGATACTGTATGGAGATT--GGGTGGGTGTTTAAAGTCT---CCTAGCTGTGTGTGCCTCTCCTTGCTTGGAAGAACGAAAAAAAT ...x:..::::x.:..x..::.xx...:..x.:......x--------..x..x..:.x..x:.:-------...x....x.x..--.:....x..x.:.:..........x.:..:....:......x.x:x.x::.--.x....x..:x.....-..............----...:.....-.........:......:.:xx.:::xx....................x.:.........:::x:............x.x...:.:.::.x...:x..............--------:.:.x:......x.......................x:.x.:........-.:..........:.:....:.......x..:..x::..:.:...x.:.x.....-..:::.x.x...:x:x.x.xx.......x:.x.:x:.:x...x.:.............x:..:..............:..:.:.xx.....--:.:x.:.....x:.xx...---.:..x..::-...x::...:...-:..::.x::..:...:.... 40M8D17M7I13M2I51M2D16M1D14M4I9M1D109M8D50M1D54M1D91M2D19M3D9M1I13M1I20M 374/525 71.2% 540/94230402 0.0% 42/525 8.0% 32826685 NA +9659 chr4 + 190214555 79306631 79306630 79307088 458 TATTTTTCAATAACAGTAC--TTTGAAAA----ATGACA---TTGTGTCTGTTTC---TTCCATTTTAAAAGGAATACAA-----CATGTTT--------AAGACCACAGAACATCTGCATAGGTAAGTATAAATCTTGTTGGCATTTTAATTTTCTCACTGGAAACCTTGTTTTCATGTGCAAGTGCTGAAGG--TTCTGGAATATTTTTTCATTATTGCTCTCGTTATGAAAGCAGCTGTTCAATGAACACAGCATATTTTGTTACCTCATCAAGAAGCAGAGGAAGATTATGTTGTGATCAAGTTTTGTATAGCTATAGTCAAAGCTTTTCTGATTGTTTGAGCCTGGTGGTTGATTTAATAGGTATACTCCAGGGCAGTTACTCATCCCTGATATATGTCCAACCCAAAACTCCAAGTTATTTATGTAAACGATGCTTCATATGCCTTCCATGCAGATAAATCCCAGTTGACAGAACTGTT chr4 + 94230402 46471297 46471296 46471736 46471297 46471296 46471736 440 TGTTTTACAATAGCTGTATATTTTGAAAATGGAATGAAAAGTTTGCATTTTTTTTCTTTTCCCTCTCACCACCAATATAATAGTTCATGTTTTAAAGGCTAGGATTGCAGGACATTCACATAGGTAAATATATATCTCTTTGGCATTTCAATTTTCCCCTTGGAAATCTTGCTG--------------TGAAGGAATTCTGGGAGCTTCTTCCCTCATTGCAC-CTTTGTGAAAGCAGCTGTTCCATCAATGCTGCATATTCTGTTA-CTGATCATGAAGGACAGCGTGAGCATG----------GCTCTTTCTGTC-----------CTCTTCTTAT--TCAGGGGAGAATTACTGATAAAATATGTTCACTGT-GAGTGATTACTCACATCTGTTGATTGTACAATTTGGGACT----GTTTCTTATTTAAATATTGCTTTGC-TGTTCTTCATGCACATGAATCCCATGTGACAAAACCATT .:....x.....:.x...:--........----....x.---...::.:.x...:---....x.:.:.xx.xx....:..-----.......--------.:..:::...:....:::.........:....x....:x.........:.......:.x:......:....:.x--------------......--......:.xx..:..:.x.:.....x.-.x..:...............x..x..::.x.......:.....-..x....x....x.x..x:x..x:...----------.:.:.x.x.:x.-----------..:....x..--.:x.:.xxx::.x::....xx....x..x:...x:-.:.:::.......:x:...x.:xx...x...::::::...----...x:....x....::x.....:::-..:::.:......x..:.......xx.....:...::.. 19M2I8M4I6M3I13M3I22M5I7M8I74M14D6M2I27M1D43M1D27M10D12M11D10M2D35M1D40M4D25M1D39M 286/413 69.2% 440/94230402 0.0% 72/413 17.4% 32835334 NA +34374 chr4 + 190214555 79308241 79308240 79309274 1034 TGCACTAACATTAGCTTCTCTGGTATTTGCAGGCTGTAAATTTCGTTGAAT-----GATGGATGCAAAGATGGAAGACAGATGGATAGAGGAAAAGACAGAATCAGATACTGGATGAGTTAGTACTGCTGCCTGTGCTTCAGAGCTGTCTTATTACCACAAGGCCGGCA-AGCATCAATGTCCCC--ACATC--CCCCTCTGCCTCCCCCTGAAATGTACCGATTTATATGAAAATTAAGATTACAAATTAAAGCCTGGCTATCCTGGAGTTTTCCAGTTCATCAGCCATCCAATAAAAATGATGTCAAGCCTGTATGCATAATTCCCGGAAGATTACTTTCGTCCTTACAGCTAAGCCCTGTCCCTGATATGAAAGATCTCTATCCACTTTTATTGAAATAAAGAACTAACATCATAATCCCAATATTGAGGTATAATCTTCATTATCTCCTGACCCTCTTGAGGTT------------CCCCCAATCTATATTACTTCAGATTTGGTTTATGTGTAATCCTTATGTATTTACTTTTATTGAGATAGGATTAAAAACTAAA-----AAAAAAGCTTCAAAAAATCCTTATGATCTCATGATTGAGTTTCATTTCACCAACAATCAACTAATGTGTTAGACTGAGTTTT-------------------------TTTTTAAGTGCTTCTTATAGTTATATAGTCCAAGCTTGAAAAGGCAT----TAATTGGTCCCATGTGTTTCCTGTTTCATTACATGAATTATTTC-------CAATTCAACTTGGTTTGTGAAATAATGGCATCATCTTCTTTTCCTATTAGAAAAGGTGTGGGAGGGGGAT-GTATGAAAA-GATAAGCA--TACACATAAAATAAT--CCAAAGTAACTTAAATCTCTTTTCTTAGGAAGTTTTGATTCATACCTATAGTTAATTACTGGTAAACCA--CAATCTACC-----------------------AACCTTTTC-TTTCCCCCAGAGCCTTAATAGCCTCTGGCTATGCCTCGGGCTGTTAACTACCAAACTAGTCATT-AATGCTGGTCAAGATGATTTCTT--GGAGATTATTGC------TCATTTATTTTTTTAACAGACAAAACAGAATTT chr4 + 94230402 46472167 46472166 46473266 46472167 46472166 46473266 1100 TACACTAAAGTTCTCCTTTCTGCTCTGGGGTGGTTGAGGGTTTTTTGGAAACAATAGATAGATGCAAAGATGGGAGACAGATGGATAGACAAAAAGACAGGATCAGATTCTAGATGAGTTACAGTTGTAGCCTTAATGCATGTGCTGTCTTAATGCTGCAATATTAGCACAGCATCAGATTCCCTCTACATCTGCCCCCCTTCCTCC-----GACTGTACCGATTTATATGAAAATTAAGATTACAAATTAAAACCAGGCTATCCTGGAGTTTTCCAGTTCATCAGCCATCCAATAAAAATGATGTTGAGCCTGTATGCATAATTCCCAGAAGATTACTTT-GTCCTTACAGCTAAGCTCTGTCCCTGATATAAAAGATCTCTATCCAGTTTTATTGAAATAAAGAACTAACATCATAATCCCAATATTGAGGTATAATCTTCATTATCTCCTGACCCTCTTGAGATTTTTTTTCTACCACCCCCATTCTATTCTGCTTCAGATTTATTTCATTTATAATCCCTATGTGTTTACCTTTATTCAGATAGGATTATAAACCGAATAAATAAAAAAACCTCCCCCCACCCCAAACAGCAAACCATTGAG------TTCAGTAATAATTCTCTAATGTGTTGGGCTGAGCTATGCAATATATTGGGTTGAGTTCTCGCTTATTCTGCGGTTCCTGTAACTCCTTA-TCAGCACTACCAAAGAGATCTTCTAAAAGA---AACGTGTCTCCCAGGCAATGCTATGGCTACTTTCCTGTTAGCATTTCCTCCTGCTTTG---------------ATCTCCCTTTGCTTGCAGGCATGGCGTAAGGAGGACATAGTATAAAGGTGATGGGTGGCTGCAGATAAGATGGTTGCTACACCTGCTAAGTGTACCTTCTCTA------TTCCACTTATTACTATTA-TGAGTGCAAGTCAATCATCCAGTATGACTGACTGGATGGTGACTTGGCCAAGACCTCTTCAGGTGACTAAGAGCCTTAATGGCCATAGACTTTGCCTAATGCTGTGAACTATCTTCCCAGTCATTCAATAATGATCAGAATTATTTTTTTCAGAGACTATTGCATGCTTTTTCTTTTTTTTTCTGGGGGCAGAGCAGTATTT .:......x:..xx.:.:....x.x.xx.xx..:..x:::...:x.x...x-----...:.............:...............x:.........:.......x..:.........xx::..:x....xx::x:xx.x.........x.:.::...x::::...-.......:xx....:--.....--....:..x.....-----:.x......................................:..x.................................................::....................:............-................:.............:...............x............................................................................:..------------......x.....x:.:..........:x..:..x.:......:.....:.....:......x...........x....::..-----......:.:..xxxxx.:..:x.xx.x.xx.:x......------....x:..:...:xx..........:.:.....:.x.-------------------------..x..xx.:.x...:.:..::.x:x..-..x:x:..xxx....:x..----...xx.:---x.:....:...::xx:x..xx:...:x.xx....-------..x...xx.:..x....---------------....:.:...x..xx:..:x.x..:..::.::..:x..-....:..::-...::.::--.:..x....:..::.--.:.x.x:x:..x.:xx:x.:..:::..------..:x.:.:..xx....x:-.:.x.:.x:..x..:..--..:.x.:x.-----------------------:....:...-xx.xx.:x...........:...x:x.:..x.....x:x.....x.....:.xxx.:.......-...:x..:...::..x....:..--:....:......------.:x:..x......:x:x:.:..:.:...x.... 51M5I113M1I15M2I5M2I13M5D129M1D126M12I82M5I39M6D37M25I27M1D19M4I7M3D34M7I17M15D38M1I9M1I8M2I15M2I27M6D18M1D17M2I9M23I9M1I64M1I23M2I12M6I33M 730/996 73.3% 1100/94230402 0.0% 142/996 14.3% 32836074 NA +3083 chr4 + 190214555 79314643 79314642 79314683 41 AAAAAAAAAAAAAAAAAAAAAAGACTCAGTAGTCTTTTTCA chr4 + 94230402 38858499 38858498 38858539 38858499 38858498 38858539 41 AAGAAAAAAAAAAAAAAAAAAAGACTTAGTGGTCTTACTCA ..:.......................:...:.....x:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 40456144 NA +14089 chr4 + 190214555 79315989 79315988 79316282 294 AGAAGTCATATATCATTTCCCATTTTCCAATTGCTCCAACTCCTATCAAGTTACTAGAGACAGCAAGTCAATGTGCCTGGTGCTGGAAAAAAATCATTCAGGTAAGCTGAGGCTACTCCTTCTGTTTCTCCATCTGCTAAGCTGTTAACACAAAGACATATTGACAAAAGCTCAAGGAAAACATGGAATACTTCATCAGTAAGATTATGCTGCCCTAGAGACAGATGTTAGAAAGCTGTAATATTTAAAAATAAAGAGATAAACACATGGTTG-AGAGGAAAGAATAAAATAATT chr4 + 94230402 46474722 46474721 46474994 46474722 46474721 46474994 273 AGAAATCATGTTGCATTACTGA------AATTGCTGTGATTCTTGTCCCG-----AACTACAGTAAGT--ATGTACTTACC------AAGAAATCACCCAGGTAAGCTGAGGTTATTCCTTCTGTGTCTCCATCTGCTAAGCTGATAACACAGAGACATATTGACAAGGGCTCAAGGAAAACATGAAATATTTCATCAGTAAGATTACGCCACAC---AGACAGATGTTGGGAAGCCATAACATTTAAAAATAAAGAGATAAACACATGCTCGCAGGAGGAACAGAAAGATTATT ....:....:.xx....x.:x.------.......x::.:..:.:..xx.-----.:xx....:....--....:.:.:x:------..:......::..............:..:.........x..................x.......:..............::................:....:................:..::.x.---...........:.:....::...:...........................x.:.-..::.:..x.:x..:..x... 22M6D22M5D13M2D11M6D128M3D55M1I21M 217/272 79.8% 273/94230402 0.0% 23/272 8.5% 32841267 NA +3627 chr4 + 190214555 79316940 79316939 79317000 61 CTTCTCTGA-GCTTCAGTTTCCTCATCTGTAAAACAGGGATAATAC----TACCTACTTTACAGGG chr4 + 94230402 13242497 13242496 13242562 13242497 13242496 13242562 66 CCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTACCTACCTCGCAGGG .:.....:.-..:.........:...........:.......x...----.......:.::..... 9M1I36M4I16M 52/61 85.2% 66/94230402 0.0% 5/61 8.2% 66074443 NA +10921 chr4 + 190214555 79319728 79319727 79320309 582 CCCCCTCTTTATCTTCATAGAG-----TGCAGTTGCATTTGAAATCTATGGTTTCTGGCATATCTGGGGTAAGGTTATACTACGAATTTACCAGACCTGTCAGTCTGTAGGTTTCTTCCATATTTCATTATATCATTCCAGTTATAATTAGTTGTCTGGTAAAATTAAGAACAGTCTATTTCAGTGACTGCTCATGTGAACATTTAACAACTTTTTGTTAGAATGACAGTTTAGCGACACAAAGAATAAACCAGAAAGGGAGAGTCACTGAAGTAACCTTACTTAACTCAATGTTGCCAGCTCAATTGAAAACACTAAGATTTTGCATTTTTTTCATTTTTGTTATTAATAATCAAGCACATATTTCTTGTCAAGAGATAAGCAGCAGTTTGATGACATTCCTGCCTCAACCAGCATGTTTTGAACTGACCTGTCTTCATTGCTATGGCTCCCAAGAAACTCTGCCGTTGACAAGCGTTGATTCAGCTGAATGCTTTGACATTTAGCTTGTCAGTGAAAGCTA-TTTTAATCATTAAGATGCATTTCCCATCCAAGATTGCAAACTGTTGCTGCTCATACACAACATT chr4 + 94230402 46478473 46478472 46478982 46478473 46478472 46478982 510 CCTCCCCCTTATCAGTGTTAAAATCACTGCAGTTG--TTTGAAATATACAGTTTCTGGCATATCTAGGGTAAGGTTATAGTTGGATCCTAACCAAATTGTCAGTTTGTAACTTAGTTGTGTATTTCATAATATCATCCTCCTTCTAATTAGTTGTCTGGCAAAATGAAGAGCAGTCTATTTCGGTGAGTGCTCATGTATATATTTAGCAACTTGGTGTT-------CAGTGGA-TGACTCTAGGAGTAG--CAG-AAGCCAGCTTTAGCCAAGCAGCC-----CAGCCCTAGGTGGTCTG------------CACT---CCTCTGCAGCAGGTGCATTGCTGCTGGCTCTACT-AGCTGTGGATTCCCTGTC-----TTAAGCAA------GTTGTCA--CCTCACTGATGTGGGACCTTTTCAACTGACCTGACTGCACTGTTGAGCTGAACCAGA-------------------------TCAGGTGAATGTTTTGACACCTCCCTCGTC----AAAGCTATTTTTGATGATTAAGATCCATTTTTCAACTGAG--TACCAAATAGTTCAATCTGTACATAGCACT ..:..:.:.....xx::.x:.:-----........--........x..::...............:.............x.xx..x::..x.x:.x:.......:....:x..xx..x::........x.......:.:xx..x...............:.....x....:...........:....x.........:x.:.....:......xx....-------....xx.-:...x.x.:..:..:--...-...xx..xx.:.x:x...:.:..-----:.:.:.x.x..x.:.x.------------....---x:.:....x:xxx.x....x:..:.:x:xx..x.-.:x::::x...:.:....-----x......:------.x..x..--...xx..x.xx::.x.:x....x..........x..x..:..:.:x.x:xxx.x...-------------------------....x......:.......::.xx..:...----.......-....:..x........x.....::..x.::..--.:.x..x.:x.x.x:::::....:.:..:. 22M5I8M2D182M7D7M1D15M2D3M1D23M5D17M12D4M3D34M1D18M5D8M6D7M2D57M25D30M4D7M1I32M2D30M 344/504 68.3% 510/94230402 0.0% 84/504 16.7% 32841255 NA +3048 chr4 + 190214555 79322479 79322478 79322517 39 TTTTATAGGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529264 72529263 72529302 72529264 72529263 72529302 39 TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA .......x::...................:......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 6793215 NA +3048 chr4 + 190214555 79322479 79322478 79322517 39 TTTTATAGGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525691 72525690 72525729 72525691 72525690 72525729 39 TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA .......x::...................:......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 6796788 NA +3350 chr4 + 190214555 79323995 79323994 79324067 73 TCTGTCTCAAAAAAAAAAAAAAAAAGTACAGTAATTGTTTTGGCTCTTTAACTTTTCAT----GCTAATTTTCACAC chr4 + 94230402 37225562 37225561 37225638 37225562 37225561 37225638 77 TTTTTCTCAAAAGAAAAAAAAAAAAAAAGAGTGCTTGTTTTGCTTGTTTAACTTTACACTGCAGCTAACTGCCTCAC .:.x........:............:x.x...:x........x:.x.........x..:----.....:.x:.x... 59M4I14M 56/73 76.7% 77/94230402 0.0% 4/73 5.5% 42098433 NA +3767 chr4 + 190214555 79327470 79327469 79327536 67 TGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGGCCAGGAGTTTAAGGCTGTAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::..........::........x.xx.x.:.x.......:x....:..:..x:........ 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 3294259 NA +3560 chr4 + 190214555 79333716 79333715 79333794 79 GTGGCGCATGCTTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTAGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.............::........x.xx.x...x::........::.:..x.xx:..:...:. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 3300515 NA +3157 chr4 + 190214555 79352691 79352690 79352877 187 GGCAGAGAAAGAGAGTAAGACAGAAGACAGATACAGAGAGAGAGAGAGAGAGACAGGTAGAGAGAGAGAGAGACAGAGAAAGAAAGAGAGAGACAGAGAAAGAAAGAGACAGACAGAGAAAGAGACAAAGACAGAGATGGACAGAGAAAGACAGAGAAAAACAGAAAGAGAGAGAGAGAGACAGAAA chr4 + 94230402 51148345 51148344 51148514 51148345 51148344 51148514 170 GGGAGAGCACGGGGCTGTGGCAAATGGCGTTTACAGAAAGAA--------------GAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACA---GCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGA ..x....x.x.:.:x.:x.:..:.x.:.:xx......:...:--------------.x..xx.x.........x...........x...::xx....:xx::..x.::...x:x..:.x:.....x...:.x:..:.x...x:..x.---:..xxxx:..:..x:...::..:...x.x.x.:.::. 42M14D91M3D37M 102/170 60.0% 170/94230402 0.0% 17/170 10.0% 28204346 NA +3113 chr4 + 190214555 79352719 79352718 79352798 80 AGATACAGAGAGAGAGAGAG--AGAGACAGGTAGAGAGAGAGAGAGACAGAGAAAGAAAGAGAGAGACAGAGAAAGAAAGAG chr4 + 94230402 41112172 41112171 41112253 41112172 41112171 41112253 82 AGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG ..x.:...::.::....:..--.x.:...:::.:..x::.....xx.....x.........:::.x........x:..:... 20M2I60M 54/80 67.5% 82/94230402 0.0% 2/80 2.5% 38240547 NA +3232 chr4 + 190214555 79352841 79352840 79352946 106 ACAGAGAAAAACAG--AAAGAGAGAGAGAGAGACAGAAACAGACAGACAGGGACAGAGAGAGAGACAGAGACAGAGACAGACAGAGAGACAGAGAAAGAAAGAGACAG chr4 + 94230402 51148377 51148376 51148478 51148377 51148376 51148478 102 ACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAG------AGAAAAAAAAGGAAAAGGAGGGACAG .....:.:..:x..--.x...............x.........x:xx...::x.::.:x.::.x..:...:xx...------...:.:.x.::....:::..:..... 14M2I60M6D26M 67/100 67.0% 102/94230402 0.0% 8/100 8.0% 28204464 NA +3316 chr4 + 190214555 79353174 79353173 79353292 119 AGAGAGAAACAGACAGGCAGAGAGAGAGAGAGAGAAAAACAGACAGACAGGAAGAGAGAGAGACAGACAGAGAGAGAGGGACAAACAGACAGAAAGAGAGA---------GAGACAGACAGGAAGAGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTA--CAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAAC--ACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ...:....:x..x:.--................:.:.......x:xx...:.xx::.:x.::..--..:...:.x...:..x...x.::x.:..:...:..---------..::..x:x......:.. 15M2D47M2D35M9I18M 77/115 67.0% 124/94230402 0.0% 13/115 11.3% 28204795 NA +38744 chr4 + 190214555 79358349 79358348 79358944 596 GTCCTACAAAACTATGTAAGTGGAAGT-TTTTTGAAGAGGGTTGGCTTGAAGCACTTCATTATTTTGAAGACTGGATTAATGTTCATAGTTTTCTGTTGCTCCTTTTTATGGGGG---TTGTCTCAAATGCAGTATATTATGCAATGGTTTTGTCATGTATCAGTAATGATATTAACAGTCTAATGCTAAACAGGTTCTGAGAAAATGAAGAGGGGAAAAAAATGACTTACTATATTTACCCTGAAACAAGATTCAATCTGCCACTGTATTTAATGCTATATTTTTCATTATCTCACAAGCATATGTTGAAACCACTACAGATAATGAAGTTAGCTGCTGGGCAGAGTTATCATCAATGCTTTCCATCTTTATTTTAATAAGAGGAATGAGCAAATTGTTTGTGACCTTTGTCAAGGGCTTCGTGAAAGACAAGACACCTAACC---ACAAAATCACTAGCCTGGAGCCCTATTGAATATTCAGATCCATCTTTCCTAGAATAAAATATTGTATAACAAAGCCATTGTTTCTGATAGAGCCATGTCTCAAACAAA-------AGGTCCAAAAGCTAAAGGTAAA----ATATACTTTCATTTTTTTTCTTTAAA chr4 + 94230402 46483167 46483166 46483776 46483167 46483166 46483776 610 GTTCTCTGAAGGTCTGCAAATGGAAACATGCCGGAAGAGGGCTGGCTTGGAGCACTTCATTATTGTGAATGCTTGAGTAATGTTCATACTTTGTCATTGCTCACTTTTATGGGGGGGCTGGCTTCGAATGCAGTATATTATGCAATGGTTTTGTCATGTATCAGTGATGATATTAACAGTCTAATGCTAAACAGGTTCTGAGGAAATGAGGAGGAAAAAAAAATGACTTACTATATTTACCCTGAAACAAGATTCAATCTGCCACTGTATTTAATGCTATATTTTTCATTATCTCACAAGCATATGTTGGAACCGCTACAGATGATGAAGTTAGCTGCTGGGCAGAGCTATCATCAATGCTTTCCATCTTTATTTTAATAAGAGGAACGAGCAAATTGTTTGTGACCTTTGTCAAGGGCTTCCTGCAATACAAGAAACCTAGCTGCAACAGAATCACTAGCCTGGAGCCCTGCTGAATATTCAAAGC--TTCAGCCCTGAATAAAATGTGCTGTAACAAAGCCATTG--TCTGATGGAGCCGTGTCTACTACAAAGGAACAGGGATCTAACAGCAAAAGTTAAATCTTTTTTATTATTATTATTCTCCCCTAAA ..:..x::..:x.x..:..:.....::-.x::x........:.......:..............x....x:..x..x...........x...x:::......x:...........---.x.::..:.......................................:....................................:......:....::.............................................................................................:....:........:.......................:.......................................:..................................x..x..x......x.....:.:---...:....................::..........:.x.--.::xx..:x.........:.xx.:..............--......:.....:.....xxx.....-------:.:..:..x...x....x....----x.x..:.x.:...x..:.:.::.... 27M1I87M3I326M3I40M2D38M2D26M7I22M4I26M 507/592 85.6% 610/94230402 0.0% 22/592 3.7% 32875182 NA +27447 chr4 + 190214555 79362536 79362535 79363121 586 TTCCAAAGGAGCAAAGCCAGATTGTCTTTGGCAATTGAAACTAAAACCCTGCACTTGTGATCAGAGACCCAAGTGCTATGATTTATTAATATTATTTTGATATCAAGTACTTGAAAAATAGTTTGTATGAACAATTGGGGAGTCTAGCAAAATAGTTTTGACATTTCGCTAACATTAGTGCTTCA-ACACTGAACCATCTGCTAGAGAGTTCCGAGT-CTGAATGAAAGGTGCAAACCTGGATTAGCATCGATATGGTTTTCTTTCAAGTTTGGCTTATTCTCATCTCACTGGATGTTTTCCAGGTCCCTTTTGAAG--CCAAGATTGCCATTGTAGAGTGCAATGCCATATGTTAAGATTCATGTGACATATTACCTAAAAGTCATGAATTATTATACCGTGTCTCTTTACAAAGCTGTGATTAGAAATGTTTATGTAAGTGCACC-TCCAAAGAAAAATGGTACCCAGTGTTGGGCAACAGTTTGCCTGGTAGCATCAATGAGATTCCCTGACACAGAGAG-----TATCTCAAAAACAGTTTAATCCTGGGATAATGAAAAATCAATGCCTTTTCCCTAAGTGTACTGATCTT chr4 + 94230402 46485475 46485474 46486035 46485475 46485474 46486035 561 TTCTAAAGGATTAAAACCA-----TCCCTGGCACCTGTGAAT---------CACTT-------------------CTGCAGTTTATTAAGATTGTTTTCATGTTCAGGGCTTCAGAAATAGCGTGTCTGAAAACTGGAGGAGTCTCCACAATTATTTCTGGCATTT-GCTAGAATTAATGCTTCTTGTGCAAAACCATCTGGTGGAAAGCTAGGAGCACTGAATGAAAGGTGTAAACCTGGATTAGCATTGATACGGTTTTCTATTGCATTTGGCTCGTTCACATCTCACTGGATGTTATCCAGGTTCCCTTAGAAGAGCCAAGATTGCCATCATACAGTGTAATGCCATATGTTAAGATTCATATGACATATTACCTAGAAGTCATAAATTATTATACTGTGTCTCTTTACAGGGCTGTGATTAGATATGTTTATGTAAATGCACCTTCCAAGGAAAAATGGCACATGATGTTAAACAACAGTATGCATGGCAGCTATAATGAGATACTTTGACTCAGTCAGGACGTTGCCTCGAAAACAATCTGATCCTAGCGTAATGAGAAATTAATGTCCTTT-TTTAAATGCACTGATCCT ...:......x:...:...-----..::.....x:..x:.x.---------.....-------------------..::::........x...:....x..:.:x..x:...x.:......:x...x....x.x.x.:.......xxxx..x..x..:..:.....-....:x....:......x-:::.x:.........x.:..:..:.xx...:-..............:................:....:........x.::x:.......::...x................x.......:..:..x....--.............::..x....:......................:..............:.......:...........:.............::............x............:......-.....:.........:..x:::....:::.......x...x...:...xx:........x.::....x...xx..-----.::...:......:.:.:.....:.x:......:....:....:.:...-::...:..:.......:. 19M5D18M9D5M19D91M1D18M1I31M1I99M2I128M1I75M5I49M1D18M 429/551 77.9% 561/94230402 0.0% 45/551 8.2% 32877061 NA +18510 chr4 + 190214555 79364141 79364140 79364438 298 GCCCATATTTTCTTAGCTTCGACAGAAC-TTAGTGGGCATTTAGTCAAGGCTCTGTGTCGCTGTGGGATCAGC-CACACGTGATTATGTATGGGATCAGCATGATCGGCTGTCACTGGTTTCACTGACATCTGTCCCCACAGTGAGACAAGCTGCAACATGAATTATTGAAGACATACACATGCAGATCTTTGTCATGATTATGCCAAATAATACATTTTGCCACACTCTTGAGAGCTGAAAGAAGTCATGGACCATGTTGTCTTTAACCCTTTTTGGCAATCTGCTACTTTGTTACAGA chr4 + 94230402 46487078 46487077 46487376 46487078 46487077 46487376 299 GTCTACCTCTTCTTACCCTCGTCGGAGCGCTGCTGGGTGCGCTCCCCAGGCTCAGTGTCACTGCGGGATCAGCTCACACATGATTATGTGAGGGATCAGCATGATCGGCTGTCACTGATTTCACTGACATCTGTCCCCACAGTGAGACAAGCTGCAACATGAATTATTGAAGACGTACACATGCAGATCTGTGTCATGATTACGCCAAACAATACACTTTGCCACACTCCAGAGAGCTGAGGAGAGCCATGTGGACAGCTG-CTTTAACCCTTTTTGGCAATCTGTTCCTGTCTTACAAA .:.:.:x.:......x.:...x.:..:.-:.:x....:::x:xx:.x......x.....:...:.........-.....:.........:x..........................:........................................................:...............x...........:......:......:............:x.........::::..:....x:xxxx.:..-.......................:.x..x.x.....:. 28M1I44M1I187M1D38M 244/297 82.2% 299/94230402 0.0% 3/297 1.0% 32877063 NA +3356 chr4 + 190214555 79368194 79368193 79368252 59 AATGATATGTTCCTGTCAGAAAAAAAATAAAACAAACAAAAAAACC----AAACAAGAAAAAA chr4 + 94230402 6760468 6760467 6760530 6760468 6760467 6760530 63 AATGACATCTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAA .....:..x.::..x...:...x....:..................----.....x...:... 46M4I13M 49/59 83.1% 63/94230402 0.0% 4/59 6.8% 72607726 NA +3260 chr4 + 190214555 79368208 79368207 79368255 48 GTCAGAAAAAAAATAAAACAAACAAAAAAACCAAACAAGAAAAAAAAA chr4 + 94230402 59161797 59161796 59161844 59161797 59161796 59161844 48 GTTAGAAATGAAACAAAACAAACAAGAAAACGAAACAGAAAAAAAAAA ..:.....x:...:...........:.....x.....::......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 20206411 NA +3357 chr4 + 190214555 79376051 79376050 79376132 82 GGTATATATATACATATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATGTGTATATATACA chr4 + 94230402 46063287 46063286 46063365 46063287 46063286 46063365 79 GGCACATTTAC-CATACATGTGTACATGTGTATGAGCACATGTCC--ATGTATGTCTATATACATATATGGCAATATATACA ..:.:..x..:-....:..:...:::........x.:.:..:.x.--..:.....x..:...........xxx......... 11M1D33M2D35M 59/79 74.7% 79/94230402 0.0% 3/79 3.8% 33312764 NA +28554 chr4 + 190214555 79385170 79385169 79386044 875 TGACTCTTTTGGAAACTTTACCTTAACTTGTGGTGCTCCTGTTTGGCTGGAAAAAGCCATATGGCCAATGAAAATGTGCAGAAGTTGCCTGAAACCAATCCACAGAGAGCTGGTAAACTATAACTTTAGGCTGTG-ATGACCACATGCTGCCTTTCATCAGCCAAGAAAACAAAAATAGCCAAGCTTTTTATAATGCTTTCTAAAAAAATTGTAAATCCATGATTGTATCTTC--------------------------------TATCAGAAAGTC----------------------TTAGTGGTAATACAGGTATCCTAGGTATGGGCCTCATTGATCCTCTAAAAAAAATGTACCACTAGGGAATTCTACTTCACCAACATTTTCTTG-------------------ACAATAGTTGAATCAATCATGTA-AATCAGTCTTAGGATTTAGCTGAT-----------------TCTGCAGCATG----GTGGTTTTCTTTGAAAAGA------------AGAAATGTCTTGATC--------CTGAA-----GACATTCACCGTCATCTAAATGTCTTCCCCTTGATTCAGTTTCTTACAT---------------------------------TATAGACTACTTTAGT-------------GAAGA-------------TATCCTTTTCTTGCAACAGTTATTCACTTAAAAAGACTTCAAAATATTATCCAGTCACTGAAGCTTCTTTGAAGAAAAATATGACTGCTCGTGTAAACAATTAATGGTTGTTAAGCATGGCAGTGTATATTATGACAAACAACACATGCTACATTATGCCAGCTGGTGTAATGATGTGATAATGTCTGACTCATTAACTCTGGCACACAGTTTACGATGCCCTTCTATGACAGGATTAATTGATTCACACATACATTAAAACAAAAATAACTAAACTGAAATTTAGCTGGAAGCCTGGCTCCTCATTTGTCATAAACCCTGCTGTTGGTGATAGCTGACAAAGACCCTAATGCCGAACGGGGT----TGAGGTTC chr4 + 94230402 46491902 46491901 46492916 46491902 46491901 46492916 1015 TGGCTGCTGTAGTAATTTCAGCCTTAAACATGTTATTAGCCTTTGGCTTTGGAAAGCCATATGGCCAACAAATCTGGCCAGAAGCAGACTGAATCCAATTCACAGAAAGCTGGTAAACCTGGATTTGTTGCTGAGTATGTCCAAATGTTGTCTTTACTCAGCCAAAAAAATACTAGCAGCCAAACTACT-ATGAT----------AAAGTAG--GACTGATGGCTGTGTTTTCACCTGACAAACGCAGGTGACAAATGCAGGGAGTGGCAGAAAGCCACCAGCATCTTTTTCAACTTGTTCAGAGCTGATTCTAGTATT-----TACCAGTCTC------TCTCT----------TGCCACAGATGCATTTAACTTCTGCC-CATTTTCTTGTGGTGCGCTCCAAAGTGGAAGGAGGGTTGGCTCCAACTTGTGTGCTCAGTGCCTTGAATGGGTAAATGAAGAGAGCCCTCCATCCCTGCAGAATATGGAGGGGCTTGCTCTGCCCAGGCTATTAATATTCATGGAAGTGTTGACCAGTGGGGATTGAATTCACGGAACTAGCTGGAATCAGAATGGGTTTGTTTT---TCAATTTTTTTTTTAATGAAGGAGATGGAGCTTTAATTGTCATTATGTATAAATTCTTTTTGTTGTTCTTTGTGAGGGAGAGGGTTATTTTTATTGTCTTCCACTAGTAAGAGTTACTTGCTTAAGAAGCTTTCAAAATATTAACCAGTCGCTGAAGGTTCTTTGAAGAAAAATATGACTGCTCGTGTAAACAATTAATGGTTGTTAAGCATGGCAGTGTATATTATGACAAACAACACATGCTACATTATGCCAGCTGGTGTAATGATGTGATAATGTCTGACTCATTAACTCTGGCACACAGTTTACGATGCCCTTCTATGACAGGATTAATTGATTCACACATACATTAAAACAAAAATAACTAAACTGAAATTCAGCTGGAAGCCTGGCTTCTCATTTGTCATCAGCCCTGTTGGTGGCTGAAGCCAACCCAGGCC------CAGAGCAGGGTGAGCTGAGGTTC ..:..x:.x.:.x..:..:.x.:.x.xx::..x.::.xx:x.......xx::................::..xx..xx......:x.x.....x.....:......:...........:xx:.:..xxx....x.-...x...x...:..:....xx........:....:.xx.::......:..x:.-..:..----------...:.x.--:.::x...::...:.:...--------------------------------.:x.......:.----------------------.:..x.x.:..x.x:....:-----..:x:.:...------:....----------.:....x::x.x...:x.....xx.x-..........-------------------.x:.x:....:x..x.x.x...:-:x.....x::xx..x.x:.:x:..-----------------:......x..:----.x..:..x..:..xxx..:------------.x::.x..x....:.--------:....-----.:x.:.x:.:.xx...x:....xx..:x::..---...:...:..x:x.---------------------------------....:.:.x:...x..-------------.:...-------------.:..:.::x..x.:..x.....:.::.....:...x:............x......:......x...........................................................................................................................................................................................................................:................:............x.:.....:..x...:x:x...::..xx..:..------.x..:.:....----........ 135M1I53M1D5M10D7M2D19M32I12M22I20M5D10M6D5M10D26M1D10M19I23M1I24M17I11M4I19M12I15M8I5M5I32M3D14M33I16M13I5M13I346M6D11M4I8M 628/831 75.6% 1015/94230402 0.0% 228/831 27.4% 32893268 NA +30880 chr4 + 190214555 79401198 79401197 79402615 1418 GCTGATATGATAATGAAGTATAATGTATGCTAAACACATAGAGAACAAGGATCACATGCAATTTCTCCAAGCCTCGAATAAATTGAGCTGTAAAGGTTGTTGATGGAAACGATGGGGGCTATTTAAATATTAAGTTTATTAAGTTTATTCATTTTGTATTGATTGAAACAATCAGAATATAGACAGACTATAGAGCTGTCATTTCAGTGGGAGGTTAAAGTAGGTGACTTACTGAGATGGTATTGTATTTATTCTAGACTTTGCTGGA-AGATTACCCTAGGGGATCTTATTAGTTCACAAGATTTAAAAA--AAGGCATGAAAGCAA------------ATTTTCCATATAGAGCAGTCATAGAGTTGGTACATAATTTCCCACCAAAATG-AGGATTGTATAATGTAACATTTAGACTCACGCATTGAGAACGAGGGCTTACCATGAGTGAAACAATAGGTTCCTT--GGTAGATTATGAATATTAATATCAAAATGATAATATAAGCACCAGACATCACACACAAACAGATAATAATTCAGATTCTGAGTAGGGTGGGGAGGGGGAGATGCTTATCTCTCTCAGTG--CAGTGTATATGGTTTCCATTCCCAGAGCTCAGTT-------------AGAAATGATCTAGCTGTTTAGTGCTGCTTCTACATTTATATCACATGA-----------------------GGTGTTTTTAATTAGATTTA-ATAATACATCTGTCTTCTCTTCGGATACCTTTAACA--------TTTCT--TTCCCTTCCTCACCTTGTTTCTCTTTTCTTCTTCTCCTCTCTCTCTCTTTCTCTTCCTGTCCTCCAACTTTTTCTCTCTCTCACTATTCTTTCTTACTGTCCTCCTCCCCTCCCAGCCACAACTTAAATTTACAAAATGGCTTCTCGGAAAATAGCATCAGAATTAGGTGC-TTTTCTTTCTCCTGGTTAGTGTTCCAGCTCATGCTCTCTCACTCGCACATATGCCTGACATTAAATGATGACTTGCTGTTTCATAACATGCATGCAGTGAGACCCCATCATCATAATTTCACCATGTAGTTCTGCTTAGTGGCAATATAGAGAAATTATTAATTAGATAATTTTATAATAAAATACACAGAAGCTCCTTTATAGCCTTGGGG-----TAAAGTATTGTAATTTACCAATATCCTATGAGTTAAGTTAAGAAAATGAGGCTTTTAAAGGCAAAGATACCTAAAAAAGATAAGCTGATAAGCACAGGAATGTGCATATGGAAGGAGTGAGAGTGAGATGCTGAGTTTGAGGACTTTTATTTCTGATTTTCTTATGACATCTTTGTTTGTAACTCTTCATAAGGTCCTTTGGAATAGGTCCCAGAAGGAGAATTATGACCGGATAGAATGAAATGAGAAATTAATTTGTTTTAAATGATTGTAGACATTATCATG--------TACTTCTCCAGCCTAATCACACAAATGACTTCAAAT chr4 + 94230402 46499150 46499149 46500506 46499150 46499149 46500506 1357 GCTGGGATAGTTACAAACTGCAATGTATGCTAAACATAGAGG---------CTGCAGGCAGTTTCTCCGACGTTTGTATAAATCACATGGTAAAGGTT-TTACTGGGAACTCAAGTGGATATTTAAATATCCCCCGGGTTAGGTTTATTCATTTTGTTTTGATTGAAACAATCAGAA------AAGCTTGCGAGGCTGTAATTTCAGCAGGAGGTTAAAGTGGGTGACTGACCGACTTGTGATCGTATTTACTTTAGACCTCAGTAGAGAGATTACTCATAGGGATCTTATTAGGCTGCATGATTTAAAAAGGAAAAAAAAAAAGCTATTGAAAATATCTATATTCAATATCTAACA--CATCTAGTAGCTGCATAATATTGCATCTAGATGGATGATAGTTTAATTTAACATTTAGTCATACACAT---------GGGCTTACTTAGAGACAAACAATTGCTTACTCCCAGCGGATTATGGGCATTAATATCAAAATGATAACACAAGCATTGGA-GCTGTGCTCAAACAGAGAG-----------CTG--------GAGGATACAAAGGAGCCTGATTCTCATAGGAGCTGATTTATTTGGTTGATCTTGCTGTAACTTTGCCTTCTTGAAAGAAAAGAGAGGCTGTAACAGCT--GTATTGCCTGTGCCTGTAGGTGAAACCAAAGACTCCAGCTAGGCTCCTGCAGAAATCCCTAATGAGATTCGCGCAGTACACCT----TGTCCTTGAGTTAAACTAACAAGCTGTGGTCTCTGACTGCATTCAAAAACCTGGATTTTAATTATTCCTCATCTTTCACCCTA---CTCTCCATGACCT--------TTCTCTCTTCATCCACTGAGTCTGACT------------------------CTTTAAAATATGAAAGGGGAGCCCTGGAAAGAG--TCACAGGCAAGTGCAGGGTCCTGCTTGCGATCAGTGTGCATGCACACA-----------ACACACA---CTGACAGTAAATGATGGCTTGCTGTCTCAGAACGTGCACGTAATGAGGCACCATCATCATAATTTAACCGTGTAGTTCTGCTTAGTGGCAATATAGAGAAATTATTAATTAACCAATTTTATAATAGAATATACAGAGGCGATCTAGCAGCCTAAAGGAGGACGAGAGCGCTGTAATTTGCCGCTATCAGATGAATTATATTATGAATATGAG---CTTCAAGGAA--------TGAAGAAACGGGGAGGAAAAATACAGCTAT--------------AATGGTTTTGAGTTGTT--TTCTATTTGCTAGTTTTTCTGATTTGCTAATGACA--TTTGTATGT---CCATCCTAAGGTCATTTGTGATGTGTCCCATGCTGAGAATTATGACCAG-CAGCAAGAAATGAGAAATTAATTTGTTTTAAATGATACTACACATTATCAAGAGAGAGACTGCTTTTTCAGC-----CACCAGAATGATTCCTAAT ....:x..::.x.::..x.::...............:.x..:---------:::..x...:.......:.xx:.:.x......::x::x.........-..:x...:...xxx:.x..x...........:xxx:xx:...:...............x...................------x..x:.:::::.....x.......::............:.......x..:..xx..xx..:.......:.:.....:.::x.:..-.......:.xx:.............x:::..x..........--..::x.x:.....x.------------..x...x....xx.:..--...xx...x.x.:......x.:x..:.x.:...-.x...x..x....x..........x.x:..:...---------........:xx...xx.......x.x..x..:--:.::.......:::...................:.:.....:::..-::::::.x........x.:-----------...--------.:...x:x::..:x..:.:x:....x:..x:--:::.x...x.....xx:x..x.::x.:..:x.::-------------...:.x.x.x..:.x.:.--..::...:.x.:.x.x..x:.x.x.:x.-----------------------.:x:.:::....x.....::-::.:....:..----.x..:.:.::.xxxx:.....--------.:...--:.x.x...xxx.x.:..xx.:.:xx..x...:..x:..:..x.:..x---....:.x..x...--------........::xx.:.:.xxx...x...------------------------...x..xx..::...x..xxx.:.x.:...x..--...x.:x:.:....-xxx..:.x..:x:.:.:.....x.xx..x..::-----------:....:.---......x.........:........:...x...:....:.:.:....:.x...............x...:.........................................:x:............:....:.....:..xx::.x::.....x::..-----x.:..:::........:..:x....xx....:...x:...x...x.....---:..x....x.--------.:..:..:xx::.xx..x..::....xx..--------------.:..:xxx....x..:.--x.:.:xxx:..xx.x..........x..x......--.....x...---:.x..x.......x....x:..:x......x:xx.............:.-:..x.x..............................xx..x.........x.--------.:...:.:....-----...xx:.....:.:.x... 42M9D47M1D78M6D85M1I42M2I15M12I17M2D33M1I34M9D32M2I46M1D19M11D3M8D31M2I34M13I18M2D28M23I20M1I11M4D21M8I5M2I47M3D13M8D27M24D33M2D14M1I33M11D7M3D158M5I50M3D10M8D30M14D17M2D35M2D9M3D49M1D52M8I12M5D19M 875/1276 68.6% 1357/94230402 0.0% 223/1276 17.5% 32902048 NA +47170 chr4 + 190214555 79412987 79412986 79413890 904 ATCCCTCTTTGTTCTAATGAA-GAAAGGAAAAATTAAAGCAAGCTACCGTGGTTTATTA--CTCATGTTTTCTCTGTTATGCATGGGCCGTGGGAGCCACCGCATTCACATTAGGAGCCCTTGGCATTTTAGGTAAGCATTACATGACAGACAAGCCAATGAGTTTAATATTCACGGATCTGGAAGTGATTTTATGAATATTTGAATCTTGAAATGTTTGATTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTTGTCATTTTCTCAGTGAAAATTGCCCTGACACTGATCTCAATGTTAATGTATTCCTGCTTACATTTGACTTTGGAATATGTTACAGCTAATTATCATTACACTGGATGAAAGATCAGAGCCCTGAGTGAGGTGCTTGGGTTTAGGAACAAAGGGAGACCAAATCAGCATCTTGGCTCTAGGCCCAATAATTGTAATCAAACATCTTGAAACTGATGGGATCT--------------------TTGCATTTATTTTTTATTTGTTATTTTTTTGTTTTCTTTCCTCACTTTTTGAAAGGAGGTGGGAAAAGGGGGCTAAGGGTTTGAAGGGGCTGAAATTTCCCCTTGAACATGATGTCAATATGTTGGCGTGTCTCCTTTTATTAAGACGCCATCCAACTGATAACAAGTCCTGCTGTGTTTTACCAACATAAAAAATTAGACTGGAGACCGAGGAGCGGCAGGTGGCTTTTGGCACCAAGAAATAATCACACTTGATGTGGAAAGTAAAGTAAAAGGAGCCATCTGTTCACTGCAGGAGGACGTGAAAAATCACATTAACATATTGTCACTAACATCATGAAATACACAGTTAATAATAAATTTAGTTATCATGGCAAGTTGCATTGGATACTTACTCTGAAAATGCAGAATGTGAAAGATGCTCATTC chr4 + 94230402 46504304 46504303 46505167 46504304 46504303 46505167 864 ATGCTGCTTTGTTTCCACGAGTGTGTAGAGAAATTGAGATGGGCCACAATAGCTTATCAGACTCATATTGTTTAT-TTAT----------TGTAAACCACAGCTGTC-TGTTGAGTGC---TGGCT----------------CGTGACTGACAAACAAATGAGTTTACCCTTCATCTATTTGAAAGTGATACTGAAAATCTCCGCATCCCGGA---TTTCAATTTTTGTGTCC-------------------TTCTTTGTCGTTTTCCCAATGAAAATTACCCCCGCACTGATCTCAATGTTAATGTATTCCTGCTTACATTTGACTTCTGAATATGTTATGGCTAATTATCATTACACAGGATGAGAGATCAGAGCCCTGACTGAGGTGCTTGG-TATGGGAACAAAAGGAGGCCAACTCTGCTTCTTGGCATGGGGCCCAAAAATTGTGACTGAGCATCTTGGAGCTGGTGGAGTCTGGAGGGGCAAGGGGGGCTTCTTGttttttttttttttttttt-tttttttgtcctttcattttattattttttATGAACTGGGGGA--GGGGCCAGG------ACGGGGCTAAAATTTCCCCTTGAACATGATGTCAATATGTTGGCATGTCTCCTTTTATTAAGATGCCATCCAACTGATAACAAGTCCTGCTGTGTTTTACCAACATAAAAAATTAGACTGGAGACCAGGGAGCGGCAGGTGGCTTTTGGCACCAAGAAATAATCACACTTGATGTGGAAAGTAAAGTAAAAGGAGCCATCTGTTCACTGCAGGAGGACGTGAAAAATCACATTAACATATTGTCACTAACATCATGAAATACACAGTTAATAATAAATTTAGTTATCATGGCAAGCTGCATTGGATGCTTCCTCAGAAAAAGTGTGGTGTGGAAGATGCTTGCTC ..x.:x.......::x.:..:-.x:x:..:.....:.:::::..:..x:.:.:....:.--.....:..x.:.x.-....----------..x:.:....x..xx..-::..::.x..---....x----------------.:....x.....:.x..........x:x....:xx..:..:.......x:.:x:...x.::.x...::.:.---...x.x.xx......x:-------------------.........:.....:..:........:...:x:..........................................:x..........::.................x......:...............x............-.x.:........:....:....x..x..x.......x:x:.......x......:.:::.:.......:.:...:...::...--------------------...:x...x......x...x..-.........::.:.:x::.:.:.x...xxx.x..:x....::.--.....:.:.------.x......:...................................:..................:..............................................................::.......................................................................................................................................................................:..........:...x...x.....x.::x::....:........:::.. 21M1I37M2I14M1D4M10D17M1D10M3D5M16D71M3D17M19D143M1D83M20I22M1D43M2D9M6D345M 689/841 81.9% 864/94230402 0.0% 86/841 10.2% 32908683 NA +5822 chr4 + 190214555 79417131 79417130 79417319 189 AGATATGTCATTCCCTGCATGCTGGGCTTCTTT--GCAGTTGTTGAAAACTAAGGCAGATGGGCACTCCAGTCAGCCTGAGGGGACAGGAGTAGCATACTTCAGGGC-ACCAGGTGCCCTGAGATTCCTCCTTTTCATCAGATGGGCTAATAGACCCACAGAGGCC--AGGGATTCAGTGA---------TATCCTAGAGGGT chr4 + 94230402 46508368 46508367 46508568 46508368 46508367 46508568 201 AGTTAGTTCATTTTGTACACGATGGACCTCTCTCTGCAGCTGTGGCAATGGGAGGCAGATGGGCTGTACAGTCAGCCTGAGGGGACAGGAGT-GCA-GCTTCAGAACTTCCCAGTACTCCCAGTCCTCTGCCATTCATCACAGAGCCTAAGGGACCCACAGAGACTAAAAGCACTTGGTGAGCACTGGGGTATCCTAATGAGT ..x..xx.....::x.:..:.x...:.:...:.--....:...x.x..xxx:............xx.x........................-...-:......::.-x..x:..:.:.:x..x:::..x.:x.......x.x:.x....x:...........:.:--.:.x.:.::....---------.......:x.:.. 33M2I57M1D3M1D10M1I58M2I13M9I13M 132/187 70.6% 201/94230402 0.0% 16/187 8.6% 32908763 NA +3659 chr4 + 190214555 79439974 79439973 79440057 84 TTGGTTTCTTTGATGTTTTGTGTTGCTTTTCTAGCCTCTATTTTATTTATTTCTGCTCTGAAAGTTAGTATTTTCTTCCTTTTG chr4 + 94230402 7526233 7526232 7526316 7526233 7526232 7526316 84 TTGGTTTCTTTGCTCTTTTGTTTTGTTTTACAAATCCTTATTTAATTTATCCCTGCTTTGGAAATTCTAATTTCTGTTATTATG ............x.x......x...:...x.x.::.::.....x......::.....:..:..:..xxx....::x.:x..x.. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 71913741 NA +39058 chr4 + 190214555 79445237 79445236 79446001 765 CCTAGGACCTAAATGGGTTGCCAGGTTCATAACTTAGAAGAATTTGCTCTTTATAACTTAGCTC-AAGAAATCATGCTTTCATTGCA-TGCTTTCAAAACATCCTGTCAAAAGACCTCACTGAAATTAATGGCTCAGAACCGATGCTAAGCTTTCAAGGATGCTGCAGTGATTTATTGAGTGGTGCCAGTCTCCGGCTTCACTGGGTGGAGAGCACTTGTCTTCATGTAACAGGGCTAATATTACTTCAAGCTGTTGTCAGTTGACTCGGTAAAATTGCTTAGATAC-ACTCCCCACACAGTTAGCTGGTGATGATTACCCTTAAGTATTCACAGAGCAGAAGCCCTGGGGAAACACTAATTAGCCACCCGCAAGGAAGATGTTCCAGCCACATAAACAATCTCCTGAAGTCTCTGGGCTGTAATGAGGACTAAGCCCCAGTGACAAAACCTGCCCTGTGCTGTGCTGCTGCATCAAGTTTCAGCAATTTTCAAGGAGAAAGTGATTGGAGTCAGGCCCAGGGATGCACGGAATCCACTAATCACCACAAAGAGACTTTGGGTACTGGAAATCCACGGGGGAAAATTGGCTCTTATGAGCTAAAGGAGACACTTGCGTATGTTGTTAAAAAGTGTGGGGGCAAT--CTGCTTAAATATTTATATATTTAAGGTATATTGGGGTCTCTTTGGTC-TTTGCATAGTTGATACCTTGCTCTCTTTCTTTTAACTAACTAAAAAGACAAAC-----AATAAACCCATATCTTTACTCAAG chr4 + 94230402 46512651 46512650 46513415 46512651 46512650 46513415 765 CCAAGGACTTAAATGGGTT---AGACTAGCACCTTCAGGGAAGTTGCTCTTTATAATTTAACTTTCAGAGAGCAGG------TTACAGTGCTCTCAAACAGTTGTGTCAAA-GACCCAGCAAAAATTAATGGCTCAGAACTAATGGCAAGCTTTCCAGGATGTTGCTCTGATTTATTGAGTGGTGCTAAGCTCCAGCATCCTTGTGTGGAGAGCACTTGTCTTCATATAAGGGGGCTAATATTACCTCAAGCTGTTGTCAGTTGACTTGGTGAAATTGCTTAGATGCTGCTCTCAGTGTAGATAGCTGGTGGTGATTACCCTTAAGTATTCAAAGAGCAGAAACCCTGGGGAAAGGCTGATTAGCTGCCCAGGAGGATGGTGTTCCAGCCATGTAAACAAACTCCTGAAGTCTCCTGGCCATAATGAGGACCAGGCCTAGGTGACAAAGCCCCCTCAGCTCTGTGCTGCTGCATTGAAGTTGAGCAATTTGCAAAGGGAAAGTGATTGGAGTCAGTCCCTGTGATGCACGTAATCCACTAATCACCACTCAGAGACTTCTGGTGCTCGGAAACAGCAGGAGGGAATTGGCTTTTATGAGCTGAAGGAGACACTGGCATATGTTGTTGAGAAGAGGGGGAGGAGGGACTACTTAAATATTTATAGATTAAGGGTACATTGGGATCCCTTCTGTCTTTTGTATGCCCGGTTCCCTGA-CTTCCTCTTGGGGATAACAAGACAGAAACACTCCTGAACCCACCTGTGTTTTTCTTCAGG ..x.....:..........---..::.x::.x...x:::...x.............:...:..:-x...:.x..x.------..:..-....:.....xx:.:x.......-....:x:.x:..................::...x:........x......:...xx..................:.:x....:..x..x:..x.....................:...x:.............:.....................:...:.............:.-:...:.x::::..x.........:....................x.........:...........x:..:......::...:x:....x.:...........::.......x.............:x...::..........:.:...:x:........:..:x.:.x.:x..............::.:x..x........x...:.:..................x...x.x........x.................xx........:x...:..x.:..x.x:.:..:.::........:.........:...........x..:.........:.:...x.x...:.x.:x--..:..............x...x.:....:......:..:...:x...-....:..:x::.:.x..:..x-..:::....xx::x....x.:.x...x.x..-----..:xx...::.:.:...x:...:. 19M3D42M1I11M6D5M1I23M1D175M1I356M2I47M1I21M1D31M5I24M 580/754 76.9% 765/94230402 0.0% 22/754 2.9% 32932586 NA +10209 chr4 + 190214555 79450065 79450064 79450479 415 TTTGAATTTTTTTCAAAGCAAGAGACAGCCACCCACAAGGACAGCTTTTCTTTCATGAAGTACAGAATGTTGTGTGGTTGCTATAATTTCCTTGGTCTCACTTGTGAGTGACTGAGTTGAGTGAGTGAAT------CAGTGCTGATGCCCAAAGCCTTTCCAGCCTAAGAAGTTCTTAGGCTGTTTAA-CATGTTCCCTGTAATCCACTTAATTGCATACATAAGCTTG-CAGGAGAACTTCCAGCTAAACGAATCAATAATGTATTCAGA-------------GCACAGTTGGAAGACACTGAAAATGAAGTTTTCAGCTTTCTGGAGCA---------------TGCTGGCTG----AGTCGCTTGTGAGTCT---TGTTGACCTGGCCAATAATTAGGCCAATAGCTTCTGGAGCTGGGTGGTCAGGATCTGAGATGTGGGTTCTGATTAAGTGA chr4 + 94230402 46518210 46518209 46518646 46518210 46518209 46518646 437 TTGAAATTTGTTGAAAAGCAGGTGACAGCCACCCATGGAAAGAGTCTCACTTCCTTGGAGTGTGTGATGCTGTGC---TGCTATTAGTTTCTAAGCTCTGCTTACGAGTGG---------GGAAGTGAATGATACACAGTGCTGCTATACAAAGCTGCCTTGGCCTAAGAAGTTCCTAGGCTATTTAAACATGTTCTGTGTAATCCACTTAATTGCATGTGTAAGCTTGTCAGGAGAACTTGAGCAAAAGCAAACCCATAATGTGCTCAGAGAAGTGGCGGGGGGAACAGCTGCAGCACTCTG-CGCTGA----TTCAGTGTTCAGAGGCAGCTTTAATTCCAAGTCACCGGCTGGAGCAGTTGCTGGAGAATCTTAATATAGAATGGGTCA--GGTGAGGCTGACAGCAGGCGAAGCAGGGCTGGAATG--CTGAGCTGTAGGCTGGGAGCACATGA ..x:.....x..xx......:.x............:::::.x..::.:x...:.x..:...:::x:...:....:---......x.x..:..x:.:::::...::.....:---------.x:.......------........x.::x......:x:::::.............:......:.....-.......:x....................:::........-...........xx:xxx..:.:..:.x.......::.....-------------.x....:..x.:x..x...-x:x...----.....:x...x.::...---------------::.:.....----...:...x.x..:...---.:.x..x:x..:..--::.x....::.:...xxx:.:...x...:x.xx.x.--.....x...:..:.xx..x:.x:... 75M3D33M9D10M6I52M1I40M1I41M13I19M1D6M4D17M15I9M4I16M3I14M2D36M2D26M 269/394 68.3% 437/94230402 0.0% 64/394 16.2% 32931855 NA +35486 chr4 + 190214555 79453575 79453574 79454076 502 TACAGCTGTCACTCCAATGTAAGACTAA------ATCTAATTTGTTGGGTGGAAAGAGTTAAATGAACTTTAACTGAAAAGCTCTCGTTCTCTTCCTCTCAGGGTAGAAAATAGCCAAGGGCAACAGCGGATGACTAATGTGTAGAATATTGCAATTAGTATAGCAAGGTACTTACAGGGATCAAATTAAAAAATTCATTAATGTACGCACTTAATTAAGAAACACTTTTCGGTTTACATGATAAATTATGACACCTATTAAATCTTCCAGTACAAGCTGTAATGGCTTCTTTGCTCCTGGGTAGAGAACTATTGCCTTTGAGGTCCTTTGAAACTCCCCAAGGACCAGCAGCATTAGTTACAAGTGTATTAAAAACAATGC--TTTCCCCCTGCAAGGTGCAAAAGCATCTTTATTGGAAACTAATTTAAACTTAAGAAAGCA--CCAGGGAGCAAGAGA-CTATCATGCTGCAAGCAAA--------TGACAACACATATGAAATGACCTTGAAAAGAA chr4 + 94230402 46520958 46520957 46521475 46520958 46520957 46521475 518 TACAGCTGTCACTCTCTGGTGTGAATAACAGGAAATTTAATTTGTTGGGTGGAAAGAGTTAAATGAACTTTAACTGAAAACCTCTA--TCTCTCCCTCTCAGGGTAGAAAATAGCCAAGGGCAACAGCGGATGACTAATGTGTAGAATATTGCAATTAGTATAGCAAGGTACTTACAGGGATCAAATTAAAAAATTCATTAACGTACGCACTTAATTAAGAAACACTTTTCGGTTTACATGATAAATTATGACACCTATTAAATCTTCTAGTACAAGCTGTAATGGCTTCTTTGCTCCTGGGCAGAGAACTATTGCCTTTGAGGTCCTTTGAACCTCCCCAAGGACCGACAGCATCAGTTACAAGTGTGTTAAAAACAATGCTTTTTTTTCCTGCGAGGAACAAACCCTGCTTTACTGGGAACTAATTTAAAGTTAAGCAAGCAGCCTGAGGATTAGGAGACCTGTCAAACTGCAAACACAGTGGATGGTGA-AACAAACAAGAAACGACCTTGAGAATAA ..............:xxx..:x..x...------..:...........................................x....x--.....:............................................................................................................:.................................................................:.................................:..............................x.............::......:............:.............--...:::.....:...x:....xx.xx.....:...:............x.....x.....--.:::...x:.:....-..:...x:......:..x.--------...-....x.:.x....:........:..x.. 28M6I52M2D294M2I60M2I15M1I19M8I3M1D28M 449/499 90.0% 518/94230402 0.0% 22/499 4.4% 32932617 NA +9060 chr4 + 190214555 79457850 79457849 79458207 358 CTTTTTAAT----CATTGAATGAAAATGTCAGCATAAGACTTTTTTCAG----------GTGATGAGGTGTTCAGTAATAGAGAATCCTTATTAGGGATTTT-CTTTGCAGATTGTTTTGTGTGAATTAAGATCCCCTATGAATACTCCAAAACAGGCTGTAATGTCTGCTAATCACT-CTAGTGTCAGAGCTTATAGTGTCAATATATCTTTCTCAGACTACATCAGGAGACAGTAATAATTTCAAGAACTAGTGCTTAAAACTGCCATCAAATAAATTCTCAGTCCCATTTCACCTAAATGCACATTTCTATTTATGATAGAGGAGGGCAGTTGTCCTTAGTCATGAAGAAATTCTCATTGAAATTTGACTT chr4 + 94230402 46523212 46523211 46523566 46523212 46523211 46523566 355 CTTTTTAATAAATCAATAACTGGAGGTGACACTGGAAAAGTGTCTTTAAAATGATTTTTGAGGTGAAGTGGAAGGCACTAGATTATCCTTATTAGTGATTTTTCTTTGCAGATTGTTTTGTTTGAAGTAGCTTCTGTGATGAGTTCTCCAGAGCAGTCCATACTGGCTGCTGATCGCTGCTTTTGTCAGCACTTACTGTGT---TATATGTCTCTGATGGTCTGTGAGGAGCCC-TACCTTTTGTAAGAACTGGTAC-TAAAATCACTAGTAAATGCAT-----ATCCTATTTCAACTAAATGTACATTTTTGTTTGAGAAAGA-----ACAGTTGCTTTGAGT--TGAAAAGTATTTCA--GAAATCTGGCTT .........----..x.:.x..:.::..x..x::x..:.x.x.:..:.:----------.x.:...:...xxx:.:.x....xx...........x......-..................x....x..:xx..:x:x....:.x.....:.:...x.::..x..x.....:...:..-..xx......x:....:x....---.....x.:...x.x:x.x::.x.....x.x-..x:xx..x:.......:..:.-.....:::.:.x:....:x..-----:...:......x.......:......:.:...:x..x...-----:......:::.x...--....:.:xx.:...--.....:..:... 9M4I36M10I43M1I75M1I22M3D30M1D22M1D21M5D40M5D15M2D14M2D12M 235/339 69.3% 355/94230402 0.0% 35/339 10.3% 32934638 NA +11605 chr4 + 190214555 79460719 79460718 79461007 289 ATTGTTTTTTTCTCCCGTTTTCTTTCTAATAGGAGTGGCCTTGCATATCAATGAGGCTTTACTTGATCCAGTGCCAACCAGTCTTTGTGGGGTAATTAATTGGCATAGTGATTGGCAAAAACCCAGCCCAAATTTTTGTAGGTGATTTGTGGCACAGGTAATTGCCTACTTGTGAGTAATT-TCTAAATTTGTGGTGAGCAGAAGGTAAGTGATATTTTGATTCTGAAGCAGCTTATTAGCAAAT--TACTGTATAAAATTACAAATGCCAAAGAATTCAGTT-TTGATTTAA chr4 + 94230402 46525393 46525392 46525681 46525393 46525392 46525681 289 ATTTCTCTTTTTGTCCTCCTTCATCCTGTAGGCACTGGCATTGAATACTGATGAGGAAATACTTGGTCTAACGCCAGCTAGTCAATTTTGGTTAATTAATTGGAATGGTGATTGGCAAAAACCCAGCCCAAATTTTTGAAGGTAATTTATAGCATAGGTAATCGTTTACTTGTGGATAATTATCTCTACCTGTAGGTAGCAGAAGGTAATGGTTATTGAGATCCAGATGCA--TCACTAACAAATGCCATTTTAGGAAATTACAAATACTTAGG--CTGAGTTATCGGTTTAA ...x:.:....:x:..x::...x.:..:xx:.x.x....x...x...:::......xxx......:..:.::....:.:....xx.x.x..x...........x..:...............................x....:....:.:...:.......:.::........::.....-...xx.::...:.xx............xx.x....xx...:.x..x...--.:.:..:.....--:.:.x..x:...........:.:x.:.--:.x....-.:.:..... 181M1I49M2D12M2I27M2D7M1I9M 206/285 72.3% 289/94230402 0.0% 8/285 2.8% 32935326 NA +3157 chr4 + 190214555 79485959 79485958 79486037 79 GCATTTCTTAATTTCATTTAATTTTTTTATTTATTGGCATAAGGTA---TTTTTTCTGTATCCTTACTATCACTTTATTATT chr4 + 94230402 73345163 73345162 73345244 73345163 73345162 73345244 82 GCTTTTCTTTCTTTCATTTTATTTTTTTATTTTTTGGAAAAAAATATCCTTTTTTTTTTCTTCCCACTTTGACTGTGCCATT ..x......xx........x............x....x.x..::..---......:.x.x.:.::...x.x...x.:::... 46M3I33M 58/79 73.4% 82/94230402 0.0% 3/79 3.8% 6140796 NA +3001 chr4 + 190214555 79490124 79490123 79490190 67 TTTCTTTTTTTTTTTTTTTTTTCTGCTGGGTTTGGGTTTGGTTTGATCTTATTTCTCTGGTTCCTTG chr4 + 94230402 89552766 89552765 89552832 89552766 89552765 89552832 67 TTTCTTTTTTTTTTTTTTTTTACTTTAAATGTTTGGTTTGGTTTGGTTTCTGTTGTTTGATGTCTTG .....................x..x:x::xx..x...........:.:.:xx..x.:..:.x:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -10062642 -84167760 +3069 chr4 + 190214555 79491157 79491156 79491207 51 ACTACCTTGTTTTTTTTTTTGTTTGTTTGTTTTTGTTTGTTTTTTATTGCT chr4 + 94230402 10122861 10122860 10122910 10122861 10122860 10122910 50 ACTGGCCTATTTTTTTGTTTGTTTGTTTGTTTTTGTTT-TTTCTTAATGCT ...:x.:.:.......x.....................-...:...x.... 38M1D12M 43/50 86.0% 50/94230402 0.0% 1/50 2.0% 69368296 NA +25270 chr4 + 190214555 79495450 79495449 79495807 358 TTTGAGTCTGATCTTACCTCATTCTACTGGTGAGCTGTACTATGTCTTGCACAGTGCTGCCTCCCTTTTT----------------TTCTG--TGGCTCTTTGACACCC-CCACCTCCCTGCCAGCCTGGTGTGGCTGATCAAGCTGTTCAAACAACTGGAAGACATCAGAAGTTAAACACTCATTATTTTAATTTGATGCTAATCATGTGTTAATGAGACTAATCCTTGCAATGATTCAGGTAATTTGCTTAATGGCTGCCCAGAGTACAGATTATAGCAATCAGTCACGTCTGATAAGATGTCTGTTGTGGAGGAGGCTGTCAGGTGAATGAAGTGGGAAAAGGCTCAGGAGTAAGGGTCTGATGTCAGGCATGT chr4 + 94230402 46529490 46529489 46529864 46529490 46529489 46529864 375 TCTGAGAGCGGCCGTGCTTTGTTCTGCAAGTCAGCTGCACTCCGTCTCGT-TGGTACAGCCTACCTTTTTCTTGCTTTTCCTTTTATTCTTGCTGACTCTTTGACACCCACCACCTCCCTGCCAGCCTGGTGAGGCTGATCAAGCTGTTCAAACAACTGGAAGACATCAGAAGTTAAACACTCATTATTTTAATTTGATGCTAATCATGTGTTAATGAGACTAATCCTTGCAATGATTCAGGTAATTTGCTTAATGGCTGCCCAGAGTACAGATTACAGCAATCAGTCACGTCTGATAAGATGTCTGTTGTGGAGGAGGTTGTCAGGTGAATGAGGTGGGAGAAGACTGAGGAGTAA-GGTCTGATCTCATGCAAGT .:....xx:.::.x.:.:.::....:.x:..x.....:...x:....:.:-::..:.x....x.......----------------....x--..:.............-......................x...............................................................................................................................................:..........................................:..............:......:...:..x........-........x...x...x.. 50M1D19M16I5M2I16M1I247M1D19M 319/356 89.6% 375/94230402 0.0% 21/356 5.9% 32965960 NA +9124 chr4 + 190214555 79509738 79509737 79509943 206 GTTTTTCCAATTATTTTTATGCACTTTGGGTTTAATCAATTAATTTTCCAAGCTGTAAATTATGCATTTTGAGATCATAATTTGTTTTTAATGTATGTCTTAACACCATGATTTGTTTCATGTTTGTAATTAATTTTGGGCTTTGAAAATAAAATTGCATGACAAATCATTATGGTAATGCCACTGCCGTAGACAGCAAAGCTGAA chr4 + 94230402 46532699 46532698 46532896 46532699 46532698 46532896 198 GTTTTTGCCATCATTAGTGAGCGCTTCAGGTTTA-TCAATCA-TTTCCCAGGCTTTAAGTTAC-----TGGAGACTATAATTTGTTTATAATGTATGTTTTAACAGCATGATTTGTTTTGTGATTTTAATTAATATTGAGCTTTAAGTCTAAAATTGCATGGCAAATCATTATGG-AGAGCTATTACCTTGAATATTGCTGCTGAA ......x.x..:...xx.:x..:...::......-.....:.-...:...:...x...:...:-----.x....::...........x..........:......x............::..x..x........x...:.....:.:xx............:.............-.:x..:.:.:..x.::.:.x::xx...... 34M1D7M1D20M5D107M1D30M 151/198 76.3% 198/94230402 0.0% 8/198 4.0% 32977039 NA +14380 chr4 + 190214555 79514825 79514824 79515228 404 GCGGTTTGTGGCACTTTGGAACACAAATTCACAGTTACCAGAAGTTAGGTTTATCACTGTTGCAAAGCCACTGAGTTCTGATCCAGAATCTCACAAACTGGTACATGCCCACGCAGATCTAGCCTGTCCAGA-AGA-TGAACAGGAGGAAAAACGCAATGCCAAGAAGGAAGCAACCGGGTCCTAATTAATCAGAAACAAATAAGTCATTTTAATAGTGATGTTGAAGGAGATAGAAATGTATTCTTATGAGAACCCTATGTTCCACCAGGATGACACTGTGAAATTATTCTACTGCCAGTTATTGTCACTA-AGTTCTGGAATACTGGAAAACAAATGAGTCATT---TGGAGTGTGTTCCTATTTTTTGTTTTTATATTTTAATGCACTTCAAGATGTAACACAGCTT chr4 + 94230402 46535448 46535447 46535843 46535448 46535447 46535843 396 GTGCCTCATGACACTTTGCAATA--GATTGACAGAAACCAGAAGCCAGGTTCATCA--------AAGCCACAGATTTCTGATCCAGAATTACAGTGTCTGATTTGTGCCAGCACAGACCTAGACTGTCCAGATAGACTGAACAGGAGGAAAA-TATAATGCCAAAAAGGAAGAGGCTGAAATCTAATTAATCAGAAACAAATAAGTCATCCTAATGGCAATGCAGAAGCAG-TATCAATTTAATTTGA-GAGTACCCTATGTTCTGTAAGGATGACATTGTACAGTAATTCTGCTGCCAGTAACTGCCGTTAGAATTGCTGAACAGTAAGAAACAAATGAGTTACTGCCTCCACTG-GTCTGTATTTTGCACGTTTAAATGCTGTGGTACTTCAAGCTCAAATTCTGCTT .:.x:.::..:.......x..:.--:...x....xx........::.....:....--------.......x..x..............:x..xx:x...:.x::....x:.:....:....x.........-...-...............-:::........:.......x::.:.::x:...........................::....:.::...:x....x..-..xx...x..x.:.x.-...x...........:::x.........:...:x.:.x.....:........x.:..:.::..-.:..x:x...:.x.:::............:.:.---.xx.x..-..::x......x:::x....x..x:.:xx.:........x.xx..:x.x.... 23M2D31M8D68M1I3M1I15M1D78M1D16M1D63M1I33M3I7M1D53M 281/390 72.1% 396/94230402 0.0% 20/390 5.1% 32979377 NA +24191 chr4 + 190214555 79526655 79526654 79527137 483 ACCAGAAAAAATGTACTTTGGGTTTCAGTTTTCTAATTATTTTTGCAACTCATATTTCCAAAATGTAGAAAAGTTAACACACTTTCAAAGA---------TTCCCCTCTTTTATTTTTCTCCAGGAATCTTTTCTGGCAGTTACAAGTTCAGAATGCTTTTGTGCATTCCAAGCAGTCTTGCCCAGATTCTGCCACCTGTTCCATCATTCTGGGTATATTTAGGGTATAGTTCTTTTCCATATGGGCAGTGTAATTCCATTAAGTAGCAATCCAGCACAATTTCTTTTTTTTTTTTTTACGTTAAACCTCGAGAGTTAATCGTCCATCTGTGTGTAATCATCGATTCCATTAAGCCTTATGGCCTTGTCAGATTATCAAACATTTTAAACAGTACTCCTTTCTTC-------------------------GCAGGAAACACATTTGATAATTAAGGGCATGATGGAATCTAAGTTTTTGAGTCTGACTCCAAGGTCCCACAGTGGCTTATGTTAATC chr4 + 94230402 46538445 46538444 46538934 46538445 46538444 46538934 490 ACAAGAAAA-------TTTGAGGATTACTTTGTTAATT---TTCACCACTTAAAATTCTCAGACTT-GAAAAGTTAACACAGTTTGGAAGACttttttttttttctttttctttctttcttttttttttttttCTGGCACTTACAAGTTCAGAATGCTTTTGTGCATTCCAAGCAGTCCTGCCCAGAT-CTACCACCTGTTCTATAATTCTGGGTATAGTCAGGGTATAGTTCTTTTCCATATGGGCAGCGTAATTCCATTAAGTAGCAATCCAGCAC----------TTTTTTTTTAACATTAAACCTCGAGAGTTAATCATCCATCTGTGTGTAATCATTGATTCCATTAAGCCTTATGGCCTTGTCAGATTATCAAACATTTTAAACAGCACTTTTTTCTTTTCTATTTTTTTTCTTCTCTTACTCGACAGCAAAAGCATTTGTTA---GGGGGCATGATTAGATCGATGTTTTCAAGATATGCTCCA--GTCTCATAGACATCTATGCTTACC ..x......-------....:.xx.:.x...x:.....---..::.x...:.x.x...:x.:.:x.-..............x...x:....---------..::.:.:..:.x.:.....::xxxxx.:..........x......................................:.........-..:..........:..x............x.:............................:............................----------.........x..:....................:...................:..................................................:...::......:-------------------------:...x...x:......x..---::.........x::...x.x.....::..x:xx:.....--...:..:..xx:::....:.x.:. 9M7D22M3D25M1D24M9I88M1D89M10D117M25I19M3D39M2D24M 374/456 82.0% 490/94230402 0.0% 61/456 13.4% 32988210 NA +20000 chr4 + 190214555 79531891 79531890 79532154 264 GGAGAAGGCCAGAGCATCCTATTTTAATCAATTATAAAAATTCTCCTTCTCCAATCAAAGAAAGGTATTAGTGAAATGAATGAAAGTAATTAAATCTAATTTAGTCATGCAAATGAGTTTAATTAAAAGAAATCTACCCTTTAATAACTTCAGGGGAAAATGCAGTTCCTTATGGAGTTTGAAATTTAGTTAAGCTCACAAGACACAATAGCTGAACTGATGAGACCACACTGTTGTAATCTGCTTGTGTAAATATTGACACAT chr4 + 94230402 46542960 46542959 46543223 46542960 46542959 46543223 264 GGAAAGACCCACTGAGTCCTGTTTTAAGCAATTAGAAAAGTTGCCTTTCTCCAATCAAAGAGAGGTATTAGTGAAATGAATGGGAGTAATTAAATCTAATTTAGTCATGTAAATGAGTTTAATTAAAAGAAATCTACCCTTTAATAACTTCAGGGGGAAATACGGTTCCTTACGGAGTTTGAAATTTAGTTAGGCTAACAAGACACAATAGCTGAACTGATGAGACCATGATGTTGTAATCTGCTTATGTAAATAATGGCACAT ...:.::x...xx.x:....:......x......x....:..x:.:...............:....................::.........................:..............................................:....:.:........:...................:...x...............................::x...............:........x..:..... 264M 233/264 88.3% 264/94230402 0.0% 0/264 0.0% 32988931 NA +3139 chr4 + 190214555 79538455 79538454 79538514 60 ACTTATGCTCCTACTTTGATTTTTTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 21393862 21393861 21393921 21393862 21393861 21393921 60 ACTTCTCCTTTTGTCTTGATCTTTATAAACTGCTCTTTTTTGTTTTTTTGTTTTTTTTTT ....x.x..::.:::.....:...x....:.x:.:......x.......x.......... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 58144593 NA +3495 chr4 + 190214555 79544375 79544374 79544439 65 TGGTGCATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033202 76033201 76033264 76033202 76033201 76033264 63 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......:.--....:.::..........::........x.xx.x...x...........:.:.. 9M2D54M 50/63 79.4% 63/94230402 0.0% 2/63 3.2% 3511173 NA +3149 chr4 + 190214555 79548019 79548018 79548182 164 TTTTGTACAAA---TGAGTTTAAATACTGAGTCACTTGACACAATTACATAGTCATTCTGGAAATGGATATTTAAGCCATGCATATTTGGGTGTGTTTTTATTAAAGCAGATTCTTCTTTATGAACAGTAAGTTGATGTTTGTGCATTTTTCATACATTCTTAAGTT chr4 + 94230402 90727049 90727048 90727213 90727049 90727048 90727213 165 TTTGATACAAAATGTAAGTTTATCTCTTATGTTTCTAAAAAGAATCCATTACTAATTCCAGACTTAATCATACGAAGCA-GAAAATTTGG-TGTTTTTTTATGAAAGGAGGCACCTCTATAACTACAGTCAGTTTCATCTTGTTCATCTCGCATTCATTCTTAGGTT ...x:......---.:......xx.x:.:x..:x..x:.x.x...:xxx..x.x....::..xx.::x:..x::.:x..-.x.x......-...x.......x....x..::x.:...x..xxx.....x....xxxx:....x...:.:x...x........:... 11M3I65M1D10M1D76M 103/162 63.6% 165/94230402 0.0% 5/162 3.1% -11179030 -83051372 +21511 chr4 + 190214555 79568177 79568176 79568517 341 GTTTTACCTTGTCTACCTCTCAATTTTTCCATGTTGTTTTCTGATA-TATTATTTTAATTATTCAAAATATTAATGGAACAGAATATCTTCTTTTAAGTTATGAATGCAATCAATTTTGAGTCTTTAATT------TTTTTTCCATAAAAT-ATTTTAATTTAGCCTAATATAATGGCACATCAACCAGTAATAGGTACATTAAATTGAATCATGATGCTCATATACACATTTTATGACACAATCAAATATCTTAATGCATTAATTCATATCTATCAGTTAATAAAATCAAGTAGGAAACATTTCGCTATTGCTGCTAACTGTACTTATCCCATTTACTGGATGAGAAG chr4 + 94230402 46554860 46554859 46555204 46554860 46554859 46555204 345 GCTTTGTTTTGTCCTTCTTTACATAGT-CAGTGTTGTTTTCTAGTCCTTTTATTGTCATTATTCAAAACATGAATAGAAGTGGATATCCTCT---AAGTTATGAATGTAATCAATTTTGAGTCTTTAATTGTAATTTTTTTTCCATAAAATTCTTTTAATTTAGTCTAATATAATGGCACATCAAGCAGTAATGGGTACATTAAATTGAATCATGATGTTCATATACACATTTTATGACACAATCAAATATCCCAATGCATTAATTCATGTCAATCAGTTAATAAAATCAAGTAGGAAACATTTCTCTAGTGCTGTTAACTGCGCTTCTCCCATTTAGTGGGTGACAAG .:...:::.....:x:..:.xx..xx.-.x:...........::.x-.x.....x.x...........:..x...:...xx.:.....:...---............:......................------...............-x...........:....................x.......:........................:.................................::...............:..x................................x...x.....:......::...x.........x...:...x... 27M1D18M1I45M3D35M6I15M1I197M 291/337 86.4% 345/94230402 0.0% 12/337 3.6% 33013317 NA +3173 chr4 + 190214555 79569472 79569471 79569545 74 GTGCACGTGTAGTCCTACCTACTCAGGAAGCTGAGGTGGGAGGATTGCTTGAGTCCAGGAGCTCGAGGTTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .............:.:.x.....::::.:......x:xx.x.:.x::.....::....:....:x:..:.::.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 3536268 NA +4859 chr4 + 190214555 79576414 79576413 79576637 224 CCCCTAAGCTTTAAACTCAACTGATATTAAAGGTGATTTGAAAACAATGAAAATTGACAGCTTTATTAATCTAGATGGTGTGTGTGAGAGAGAGACAGAGTGTGTGTGTGTGTGTGCGCGAACACGCACATGATGTGTGACTGCTGCATGTATAGACTGTGCATTTTTACTGTGGGCCTTGCACAGACGAGGGAGCCCTCTACTGATTGGAAATTGTACTAGAT chr4 + 94230402 46561850 46561849 46562030 46561850 46561849 46562030 181 CCCTTGTGTTTTTGTATCATCTGATATTAGGATGGATTTGAGAACAATGAGAAATGACAGCTTCATGCATTTGGATCTT------------------CGGTGAATGCAAGTGTGTGAGAGAAGGCGCA-----------------------ATACACCGCGCACGAT--ATATAGGGCTGCCATAGGCGAGGGAGCCCTCTACTGATGAGATAATGAAGTATAT ...:.:x.:...x:xx...x.........:::xx.......:........:..x.........:..xx..:.:...xx.------------------x:...x:..::x.......x.x...x:....-----------------------...x..:.:...:xx.--x.:.:..x..xx..:..:....................x:..x.x..x.x..x.. 79M18D31M23D16M2D55M 125/181 69.1% 181/94230402 0.0% 43/181 23.8% 33014564 NA +3776 chr4 + 190214555 79584371 79584370 79584480 110 ACTTGT--CAGAAGTATTAGCACTTATCAAATTGTGCATTGCTGTTTAAATAAGGCATTTGTGTCTGTGTCCCTGTAATATGAATGTTACTTGACCCAGAAAACTATTCCTC chr4 + 94230402 56087994 56087993 56088104 56087994 56087993 56088104 111 ACTTGTACCAGAACTGTTGGCACCTCCCCA-TTCTCCACTGCTACTTGAATGGGTCCGTTGTATGTGTTTCTGCATAACATCAATGTAACTTCACCCAAAATAGTATTTCTC ......--.....x.:..:....:.x:.x.-..x.x..:....::..:...::.x.xx....:.x...x..:x::...:..x.....x....x.....:..x.x....:... 6M2I22M1D81M 76/109 69.7% 111/94230402 0.0% 3/109 2.8% 23496377 NA +11300 chr4 + 190214555 79594724 79594723 79595151 428 AAAGTGTTCATTTTAAGCAAACAAATGAACTCTAATTGCTGCAACGTGTCCC----TGGTTTATGAATGTCATTGACAACAGGATAGGCCAAAATTATACAATTTATATA------------TTTGTGTGCCCTCATTAAAATCATGAGAAACATTAATGTGTATAAATGGTAGAGATTTCCAAA--------TCTAAAATTATGCTAAATATCCAATGTGGTCTAAA-----------TTGTGCAGATTGGAACTATGACATATACTTTTACGAC-TCTGGAGGTCTAATTTATGAACATTGTTACAAGGTTTTTAATGGAGTGAAAATGAAGTCAAATTGAACTTCTTCCTGATGACATTAAAGCTCCAATCACAACACAT------AGACTAATAAATGTTACTTTTTAGGTAGTGACTGTCCCATCAAAGCCTCTTTAATTTGAGTGAAATTGTAATAGGGAATGT chr4 + 94230402 46568859 46568858 46569306 46568859 46568858 46569306 448 AAAACATTAATTTTAAGTGAGTGAAAGAGTTCTCAT-----CAGAATGCCTCATTTTGGGTTATTAATGTAATTGAAAACACAATCTACCTAAATTATGCAAATTATACGCAAGGAGAGGGGTTTTTTAGCCTACATAATGATAATCTAAA----TAAAATGTGGGTTGTATGGGGAGTGCCAAAAGACTGGATCCCAGATTAATATGAA-ATGCAAAGATGTGTAAAAGACAGCCACATTGTGTAG-CTGCAACTTTG-------CTTTTAAGATGTTTAAAACCCTGATTTATGAACATTGTTACGAGGTTTTTAAC----TGAAAATGGAATGAGGTTAAACTTCTTCCTATTAGCATTAGAGTTACAATCACAATACATTACAATAGACTAATAAATGTTACTTTTTTAGTAATGAAATTGCCATCAAGACATTGTTAATCGGAATGAGATTATAATTGGAGTTGT ...:::..x........::.:::..x..::...x..-----..:x:..:.:.----...x....x.....x.....x....x:..xx:..x.......:...x.....::------------...x.xx...:x...x.x:..x..xx:..----...x:...:x:xxxx:.:.:..x.x.....--------..:x.:....xxx.:..-..x...x.xx..x....-----------.....:..-:..x....x..-------......x..:-.:.::.:x:..:..................:..........:----........:.:.x.::..:...........:x.::.....:..:.x.........:....------......................x:...:...xxx.x.......::.x.:x.....:x..:...:...:....x..::x... 36M5D11M4I54M12I29M4D30M8I17M1D17M11I8M1D11M7D10M1I42M4D60M6I81M 286/406 70.4% 448/94230402 0.0% 64/406 15.8% 33025865 NA +14201 chr4 + 190214555 79604256 79604255 79604481 226 ATTTGAGAGTGAGAGGGTTAAGTGTTGTGATCATAAACCTTACAGTAATTGCTCTCAGACCTATTAGCAAAATGTCTTGCATAGAGTGTCATCCTGCCATTCCCCATGGGTCCTGTTCACTAACCCCTTGCATTTTGACAGTTATTATCATCC----AAGCACAAAACATCACT-GCTGCAACATGGAGCTATCTGCATAGTAATGTATCAACAT-TACTTGGTCTCCAAGA chr4 + 94230402 46571028 46571027 46571259 46571028 46571027 46571259 232 ATCTGAGAGGTAGAGGGTTAAGTATTGTGATCATAAACCATACAGTAATTGCTCTCAGACCTATTAGCAGGATGTCTTGCATAGACTGTCATCCTGCCCTTTCCCTTGGGTCCTGTTCACTAACCCTTTGCATTTTGACAGTAATTACCATCCAAGTAAGCACAAACCATCACCAGCTACAACACAAACCTACTGTCATGGTAACGTAGCAACCTCCAGTTCATCTTAAAGA ..:......xx............:...............x.............................::..............x............x..:...x....................:...............x....:.....----.........x......:-...:.....:::.x...::xx...:....:...x....x.-:.x..x:...:x.... 153M4I17M1I40M1I16M 191/226 84.5% 232/94230402 0.0% 6/226 2.7% 33033228 NA +3122 chr4 + 190214555 79609435 79609434 79609490 56 TAGTTTGACTTCTTCTTTTCCTATTTGGATGTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 49759313 49759312 49759368 49759313 49759312 49759368 56 TAATTTGTAACCTTCTTTTATTTCTCAGATGTCCTTTTTTTTTTTTTCTTTTTTTT ..:....xxx:........x:.x:.::......:.............:........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 29850122 NA +13089 chr4 + 190214555 79616060 79616059 79616526 467 TGCTATTTTTGTTAGAAGTAATTGGTGGTCAATAGGGACTGGCT--TTGTCACTTCTACTCTTTTGAAATGAGCCTGATGTGTCTCTTGTTATCCATGGAAATGCCACCTTTATCCCCACTGTACTTTTCAATTCATTATCCCCTTTGGACAAGTGATTGAGTCCTCCTGTAATGT-CTTTAATGGAAGCTGTGTTACTTAACCAAGGAAGCTTGGGATGGAAAAGACA-GGTATTTATTTGTAATGGGGTCACCCTGTATCAGGTGAAACTCTCTGCTTATGGGTCAAATGCAAGTGTCACACTGAGTGGATGTTTCTGTGGGATGAGCACAGAGTGGAG-------CTGGTTCACGCTGCGGTTTCTTAGCCACCTGTCTTGGAAAATATGTACTGCTAACCAGCTTGTAAGTCATCCTTGTTGACAACTAATGTCATGGAATAGTAAGACTCAAAGATAGAAGT-TGGTCATTTTT chr4 + 94230402 46573046 46573045 46573512 46573046 46573045 46573512 467 TGCCACACTTGCTAGCCGTAATTGATGGCCAACAGAGGCTGGCTCTTTGTCACTTCGAGTCTCCCCAGCAGAGCCTGATGTGCTGCTTGC-------AGAGAAGCAACCTCTG--CCGACAGCAAAGCTCCGTGTGCTGCTCCCTTTGGACAAGTGATTGATTCCTCA-GTAATATTCTTAAATGGGTGCTGTATTGGAATCCAGTGTGACCATAGGATCAGAGAGACAAGGTCTTTAACATTAATTGGGCCACCCTGTGTCAGGTAAATTTCTCTGCTTATAGGCCAAATGCAAATGTCACTTGAAGTGATTGTTAGAAGGGAACAAATGTGGCTTTGAGAGCACTCCTTGTTTAGAGCACAGGTTTTT--CCACGTGCATAGGAAATCACATACTGCTAGCAGAGTTTGAAGTCATTGCTTTTGACAGAAATGGTCATGGATCAGCAAAACACTGAGACAGAAATAAGGGTATTTTT ...:.:x:...:...xx.......:...:...:..:.:......--..........x.x...:::x.:xx............::x....:-------:..:.x..x....:.:--..x..x.:.xxx:..x:.x:::.:::....................x.....x-.....:.-...x.....:x.....:..:xxxxx.x:x.x:.x.x.:....x::.:.....-...x....x:xx....x...:........:......:..x:...........:..:.........:......x:x:....:x....xxx:x..:.::.:::::.xx.x...-------..x...:.x:x::.:.x..:..--....x..:x.x.....x:.::........:.x::x..xx.......:x:.x......:xx.xx........x:..:..:..x.x:...:....:.-x..x:...... 44M2I44M7D16M2D53M1D7M1I52M1I111M7I22M2D95M1I11M 301/455 66.2% 467/94230402 0.0% 24/455 5.3% 33043014 NA +28667 chr4 + 190214555 79622560 79622559 79623707 1148 TTTCCTTTCTTATACTTGGCATGTCATGTCTGCTCTCCAGGTTGGTATCTGATGAAATCTCCCAGTTTTACTTTAATTGGCATTGGCAACATGCGGTCCCTGATAAAAAGCATATTTTCTTTCGAGATTACAATCATCAGTTGGGCTCATTTTTCTTGGCCCCTCCATCGAGCTGAACTTCTTTGGAAAAAGAAACAGCAGCTTGTGGGTTACTAAATGCCAGAGAGCTGAACTTAAAAAAAAAGAGAGAGGAAAAAAAATCACAAAGGAAAACAACTTAAAAATACATTTAGAAAGCCTGCGTGCATGCATGCGTGTGTGTATGTGTGTGTGCATGAGAACATAGACTTGCATTAATCACTCAGTTCACATATGATATATATGCAGAACTAGTGTGTGTATGCAAAACTCTTAAAGGGCATGATTTTTA-TCCATAGCC-TATTTATTCCAAACATAGCTAAATG---AGGAGGCCAAATATAGAAAGTGATGCTCCAGGGGCCCTACAGCCTATATAGAATTTAAACTCAAATG------------ATTTGCAAAATCACTACTAAGACAGCTTGCTCATACTGTCAGCGTGCCAGCACCAGAAGCTTGTCGTGTATTTTTGTCTTGGCAGATGCACATTCTGTTATAAAGGTCTGTTCATCTGATGCCTTCCTTGTTTTCAGGTAATGCTCAGCGCCTTCTTGCAGAGGGAAG----AGTGAGCCTGTGT--CGCTTCTCCATGTCCTGGAGGAGACA--------GTCTGCACTCAGACT---CTGACCATGTGCTGGTGTCCTGGCTTAC---CTCCATTAAGAGTTCATTTCTGCTCCATAAAACTACAGGTCACGAGTGCTCTCATTCCTTTCTTTTTATATTAT--TCAATTTTATTT--CTGACATTTGCCAGGGC---ACAGGGAAATAAACCAGTGTTAGTTAATATCAACAATGACTCCGTTTC-------------------------TTTAAAAATCACCTGAGGTT--TGAGGAGGTTGTCTTTTTTTTCTTTTAGATT----------------AAAACATGGTTTCCCAAAACTGATTAGCA-TAGTTTTTAAGCCACTCTGAAGTGTTTGTTAGGCTTCGCATGCTGGTCTCCATATGCCTCTTTTCAATTACATGTGCCGCCACAAGTA--TGGCTAAACG--AAACGCTTCTTTAAAA--ACAGAAAGCAAACTGTTAGGCT chr4 + 94230402 46579080 46579079 46580147 46579080 46579079 46580147 1068 TTTTTTTTCTTCTTTTT-----------TCTTTTATGCAGGCTTATATCCGATGAAATCTCCCAGTTTTACTTTAATTGCTGTTGGCAACATGTGGTCGCTGATAAAAAACATATTTTCTGTCGAGATTGCATTCATCAGTTGGGCTAATTTTTCCTGGCCC-TCCACCCATCAGAGCTTCTTTGGAAAGGGAAACAGCAGCTTGTGGGTTAGCAAATGCCAGGCAACTGAAC----AAAACGAGAGAGAGGGAGAGGGA-----GGAAAAAACAACTCACAAGT-CTGTTGCAAAGCATTTGTACA-------------------------------------------------------------------------------------------------AAAAGTCTTGGAAGGATTTCTTTTTAGCCCGTAGCCCTGTCTATCT--------GGTGAATGCTTAGGTGGTGGTATATAGAATGTGTTGCCCTTGGGGCCTTACGGCCTTTGCAGAATTCATACTCCAATCTTGTAATGGATCATTTGCAAAATCATTGCAAAGACAGCTTGCTTATATTGTCACAGTGCCAGCACCAGAAGCTCGCTGGGTATTTTTGTCTTGGCAGATGCACATTCTGTTGTAAAGGTCTGTTCTTCTTGTGCCTTCCTTGTTCTCAGGTAATGCTCAGCACATTCATGCAGAAGGAGATTTTTGATAGCTTGTATTATGATTTTTTTTTTCCTTGGGAAAAAAAAAAAGGGAATGGAAGTCAGACGCAACTGGTGCTGTACAGTTGT--TGGTTAACGCTTTCCCAGATGGGT-------TGCTC-----------------TGAGCTTTCGAAGGCATTTGTGTGGATGTTGTGGGTAACCCTGTGTGCATGGGATCCGAAAGGAAAAGATGATGAGAGGAGGAAGAGTTGGTGGAGA--------GGCTCCCTGTCCCTTACAGGGTGCTGCTATGCTGTTCTTCAAAATCACCTTGGATTCCTGAGAAA------------TTATTCTAGAGTCAAAAGAAAGGGAGGGGAAAAGAAGTTTCAAAAAATTGATTAGCATTAGTTTTGAAGCGATGCTGAAATGTTTG-CAGGGTTTGCATGCTGGTCTCCATATGTCTCTTTTCAATTCCATGTGCTGGAAGAAAAAAGTGGCAATGTGTAAAGTGATTTGTTAAAATTGTAAAAATGGAAATGCTATGCT ...::......x.x:..-----------...x:.x.x....:.x:....:.............................x::...........:....x..........:..........x........:..x..............x.......:......-....:.x.x.x..:............::.....................x:.........:x.:......----....x:.........:.:.:::.-----::::.........:.x..:.-.xx..:x.....x.x:..:..-------------------------------------------------------------------------------------------------....x....::.:..xx.xx......-:..:.....-.:.:...::--------.x.:....---...x..:x:x........x...x...:.:x......:...:....x.::......:.x....x...x------------.............:.:.x.............:...:.....xx..................:.::.x................................:.............x...x:.............:................:.x...x......:...::----x.xx...:...:.--:.x..:.::x.x....x.:.:.:.x.--------:x:x.x.x......x---...::xx...:.x.x...--...:.x..---:...xxx.x.:..-------.....-----------------:...:x:..xx.xx.x...x.x.xx..:..:.--x:..:::.:.x.--x..:x..::.xx...:x---.:::x..:.x:.:xx..x...:..x:.x.--------.:....x.x..-------------------------:..x..........x:.:..--....:.:------------..x..:....x.----------------:...x:x:.....xx....:.........-.......x....x.:x.....:......-:...x..:...................:............x.......:.xx.x..:x.--....x.x::.--..::.x..:x......--::.:...xx:..x..:..x... 17M11D134M1D70M4D23M5D20M1D21M97D26M1I9M1I9M8D8M3I67M12I168M4I13M2I26M8I15M3I18M2D8M3I13M7D5M17D32M2I12M2I17M3I29M8D11M25I20M2I7M12D12M16I29M1I28M1D59M2I10M2I16M2I22M 719/974 73.8% 1068/94230402 0.0% 268/974 27.5% 33043480 NA +43642 chr4 + 190214555 79625455 79625454 79626139 685 TGCACACATTTCCTGAAAGGATTTATAATCCAGCCAATACGGTACATTTTGAATGTGTTACAGAAAGGACAGATTTACAGGAGACAATCTGCCTTCATGATGATTGCATATTGTGGCATTTCTAGTCCATATGGATCAGTAAGACTTGGATAGCAGGCATTTGACCTTCAAAATCATGCAAATGTGAAACCAGACTTCT-TCTCTTACAGCTGGGAACGTCA--GTGGGACTTCTTCAGCTTATTTTGAAGGCAGTGATTAAAGCACAATTTGACTTCTAAAAATTATTGAGATCTTATTTTAATGCTTCTTTCCCCCTATGGAGAATGATTTCGTCTTTTGCTTCCCTCATCCCCATTCCCTCTGGCTAACCTTCACTCATTAGCACCCAGAACTCAAATACTGATCATTTAAGAGAGAACTTGCCAACTCAGAGCCATGGGCTAACTATAAACAAGACTTTAAACCTTTTTGCTAATGCCATAGTTAATCTCAAGTAATAACTTCTGAAAACCTTTGAAAAGGTCTGAGAATGGCTTTCTGTCAGGGGCCTAAGGAAACTGTACATTTTCTCACCGTGAAACCTTGATCATGCCAGATATAATCAGACTGTTTATCTGGCAATGTTAATTTTCTGAGTTTACAGTGTAACAATTCGCCAAGATTATTGGAACAGAATCAGAAGAAG chr4 + 94230402 46580664 46580663 46581341 46580664 46580663 46581341 678 TGCTCGTATTTCCTGAATGGATTTATAATCCATCCAATACGGTACATTTTGAATGTGTTACAAAAAGGACAGATTTACAGGAGACAATCTGCCTTCGTGATGATTGCATATTGTGGCATTTCTAGTCCATATGGATCAGTAAGACTTGGATAGCAGGCATTTGACCTTCAAAATCATGCAAATGTGAAACCAGACTTCCATTTTTTACAGCTGGGAAAGTCACAGTGTGGCTTCTTCATCTTATTTGGGAGGCACTGATTAAAATACAACTTGACTTC-AGGAATTATTGAGATTTT-TCTTACTGCCTTTTTGCA-----GAACGGTGGCTCGAGATCTTTCTCCCTTCTTCCTCACCCCTTCTGGCTAAACTTCACTCATTAACACCTATGACTCAA---TTGATCATTTAAGAGAGAAGCTGCTAATTTAGAGCCATGGGCGAGCTACAAACAAGACTTTAAACCTTTTTGCTCACGCCATAGCTAATCTGTGATAATAACTCCTGAAAGCCTTTGAAAAGGTCTGAGTGTGGCTTTCTGTCAGCTGCATTAGGAAACTGTACATTTTCTCACTAAGAAACCTTGATTGTGCCAGATCCAATCAGACTGCTTGTACGGCAGTATTAATCTTCTTGCTTTACGGTATAATAACTCACTGAGATTGTAGGGATGGCATCATTAAAAG ...x.::..........x..............x.............................:.................................:.....................................................................................................:-.:.:.............x....--...x.:........x.......x.:.....x........::....:........-.::............:..-.:...x...:.:...x.x-----.:.x::..::.:x:xx.:..x..:..:..x...:..::..:.........x............:....:.x:......---:..................x:...:..:.:............x.:...:.........................x.:.......:......xx::........:......:..................x:..............xx..x.x......................::x...........::........x:..........:..:.x:....:.:.....:....x:x.....:..:...:..:..:.::.....:.x..:.::.x....xx.:... 199M1I22M2I54M1D18M1D18M5D78M3D286M 564/675 83.6% 678/94230402 0.0% 13/675 1.9% 33044791 NA +3656 chr4 + 190214555 79628092 79628091 79628170 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTCGAAACCAGCAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::........x.xx.x...x....:...x....x..x:xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 3594891 NA +24173 chr4 + 190214555 79634079 79634078 79634464 386 AAAATCTATTCTG-GGAGGGTAACACTTAGTGGGACATGTTCCCTGTCCCTCCGGCTGTAGCTTTCTAAGTATTCTAATAACTCAAGTAAACTGCCGGGACAAACAACACAGCTATGACTGTGTCTGGAGATACTGCATCTGCCTTCCTTAATCAACTTCCTTTCCTGAATATGAATTGCAATAATGAGTCAATTAACGTCCTCAAATGCCAATGAGATGCAAAAGAGATTGGTAGTGGTGGTGGTGGCAGTGCGTTTCGGGAGCTCTTCCAATGTCTGGATTTTAACGAGAATCACACACTGAGCTCACAACTGATTATTTATCTCACGCAAACGTGACTGGCTGGCACTTTCCCCTGCAGCCTTCCCCCCGGCTCCCCCAAGAAA chr4 + 94230402 46589205 46589204 46589588 46589205 46589204 46589588 384 AAGATGAATTCTGCATGGGGCCACTCTTCCCAGGATTTGTTCCCTGTTCTCCTGGCTATTACTTCCTAAGTATTCTAATAACTCGAGTAAACTGCCGGGACAAACAACGCAGCTACAAATGCGTCTGGAGATTCTGCATCTGCCTGCCTTAATCAACTTCCTTCCCTGAATATGAATTGAAATAATGAGTCAATTAACGTTCTCAAATGCCAATGAGATGCAAAAGAGATTG---GTGGAGGTGGTAGCAGTGCGATTCGGGAGCTGTTCCAGCGCCTGGATTTTAACAAGAATCATACACTGGGCGCACAACTGATTATTTATCACATAAAAATGTGCCTGCCTGGCACTGAGCCATGCTCACCCCGCCCCAGGTCACTCAGGGAA ..:..xx......-:x:...:x..x...xx::...:x..........:.::.:....:.x:...:...................:.......................:......::.x..:..........x............x.................:...............x....................:...............................---....x......:........x..........x.....::.:............:.......:......:..x..................x..::x...:...x...x........xxx..x...xxx.::.x....:.x..x.:..:.:.. 13M1I218M3D152M 315/383 82.2% 384/94230402 0.0% 4/383 1.0% 33044874 NA +23183 chr4 + 190214555 79651449 79651448 79651933 485 CTTTGCTATTCCCTCTTAAGTCAGTGATAAAATATACATGGAACAAATTATCTCAGTCTGCCA--------------ATTATGGTTGGAAGTATAACATTATCCTTTAACTTAACATTTATGAAGCAATTTGCTATAGAAATAGGGGTGATGTGATGG-TTTTCAGATGGTAAACTGTGTTA-ACTGCTTGAAAATGCAAACAATTTAGGAGCTGACAGGTTCAATTCTCAAGTAGAGGAGGTGCATTGTGATGTTT-GGCATTGGTTAAATATTCAATCATTCCACTACCCTGTCTGTGGGAAATATGCTAATGGGTTATTGCTACAGCCTTTGAACTCCCAGGGCAAGTGAAGCCCAGAATTCCATAGCCCTGATGCCAGTGGGTGTGATTACATTTGATGGATGCAAATAACCTTGGCTTTAATATCT-TGATTGATCTGGAATGTATTAAG---GAGGAATTTTTATCACACAAACAGAATGCTACAGAATCAAATTCTACT chr4 + 94230402 46593195 46593194 46593686 46593195 46593194 46593686 492 CTTTCCAGTTTTCTCCCTGGTAAATAACGAACTGTATATAAAACACATTATTTCTGTCTGTCAGGAGGCACTGTCTAATTGCAGCGGGAAACATAATGTTATCCTTTAGCTTAACGTTTATGAAGCAATTTGCCATAGAAATGGGGACTATGTGATGGCTTTTCAGATAGT-----GTGTTGCATTGCTTGGAAATGCACACAATTTAGGAGCTGACAAATCCAATTCTGAGGCAGAGGAGGACCATTGTGATATTTTGGCACTGTTTAAATATTCACTCATTCGCTTGCCCTGTCTGTGG-AAATATGCTAATGG-TTATTGCTGTAGCCTTTGAACTCGCAGGGCAGGTGAAGCCCAGAATGCCACAGCAACGTTGCCAGTGATCTTGATTGTAGCTGATGGATGCAAATTGCTTTGGCTTTGATATTTGTGTTTGATCTGAAATGTGCTCAGAGTGCAGGGTTTGTGCTA-------AGGATACAATAGGATAAACCTCTGTT ....x.x:..::...::x:..x.:.:.::..x.:..:..::....x.....:..x.....:..--------------...:::.:x....::....::..........:......:.................:........:...::x.........-.........:..-----.....:-.:......:.......x..................::.:.......x.:.:........xx.........:...-....:..x...........x......xx:.:............-..............-........::.............x.......:..............x...:...xx:.x........:x:x.....::.x:..............x:.:........:....:.-..x........:.....::.x..---.x:.::...x.:::.-------..:..:.x.:..:..x..x:...::. 63M14I81M1I12M5D6M1I74M1I43M1D14M1D114M1I23M3I15M7D26M 365/471 77.5% 492/94230402 0.0% 35/471 7.4% 33058254 NA +3186 chr4 + 190214555 79654635 79654634 79654671 37 TATATATTATATATATATATACACACACACACACACA chr4 + 94230402 30834200 30834199 30834236 30834200 30834199 30834236 37 TATGTATTATATATATATATATACACACACACACACA ...:.................:............... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 48820435 NA +52300 chr4 + 190214555 79687106 79687105 79687935 830 TGTTTGGCCCATCTGCTAAAGAACTGTGGGGAATAACGTCTGCCCTACTGGCCTCAGCAATCCACTGCATTAATAGAACATAAGCGCTTATGCAATGGCACTGGATCTGTGGCAGCTGTTTGTTCAATGTTTCATGCTTTTAGTCACATCTGCTCCAAATGAGTGTTAATATTACAGTGGCATCCACTAAGGATGGGCTCTGTCAGCTTTGCTGAGGATCAGTCTGACCCCTGAAACAATGGAAAAGCACTTTGTCCCAAAGTACCATCTTTTAAAATATCTGTATCCTCTTAACCTGCAGGTTACACCATCATACCCTCTCTGCCTTCAGCTTTCTGCT--------CTTTAATCCACACCCCCCACCCCAACA-------------AATGAAAACCCAAGTCAGTGAATCTCAAGGAGAAAAACTGCATTTATTTCTAGCACCCTGTCCAGCAATGTCAGATAACAGTTTATTCATCCCCCGGCCCCTGGATGACATTGAAGCATATCAACAGTGACAAAAGTATATTGAATAATTATCTTGAAATTAATACATTATCCCAAACTTAAATAAATGTCATCTGATCAATATATCTTGGAATGGAAAGGGAAGAGAATGTGAAGGGCATCACTTCATTATTCATTAATTTTAGAGTAATGTAGGCAGATGAAATGGTTATTTCAGAGCACTGCTATTATACTCACTGGCATTTTAAATAACTCCCAATATTTAACAGTATATAGTCTCTTGTTGGAACAGCTTATAGATGTTAACACTTTGGCTTCCAGATTCTACTGTTCTGGGAAGTCAACTGACAATATTCAAAGGCCATTACTTTTGTTTCTCTCTT chr4 + 94230402 46597533 46597532 46598354 46597533 46597532 46598354 822 TGCTTGACCCATCTGCCAGGGAACCA-AGGGAATAGAGGCTGCCCTCCCGGCCCTGGGAAAGCAGAGCATTAATAGAACATAAGTGCTCATGCAATGGCACTGGATCCGTGGCAGCTGTTTGTTCAATGTTTCATGCTTTTAGCCACATCTGCTCCAAATGAGTGTTAATATTGCAGTGGCATCCACTAAGGATGGGCTCTGTCAGCTTTGCTAAGCATCAGGCTGACCCCAGTGACAACGAAAGAGCAGTTCAGCCCACAGTGCTCTCT--------GTGTTTTTCCTTTCTGCCCCCCCG--------------CCTTGCTGGGCTCCGCTCCATGCTAACGCCCTCCGCAGTGCTCCCTCCCCACCAAAGCAGAAAAAAAAAGAGAAGGAAAAACTAAGGCAGTGATTCTCAAGGAGAAAAATTGCATTTATTTCTAGTACCCTGTCCAGCAATGTCAGATAACAGTTTATTCATCCCCTGGCCCCTGTATGACATTGAAGCATATCAACAGTGACAAAAGTATATTGAATAATTATCTTGAAATTAATACATTATCCCAAACTTAAATAAATGTCATCTGATCAATATATCTTGGAATGGAAAGGGAAGAGAATGTGAAGGGCATCGCTTCATTATTCATTAATTTTAGAGTAATGTAGGCAGATGAAATGGTTATTTCAGAGCACTGCTATTATACTCACTGGCATTTTAAATAACTCCCAAGATTTAACAGTATATATTCCCTCGTCGAAGCAGCTTATACATGTTAACACTGTGGGTTCCAGATTT--CCGTGCTGCGAAG--GACCGGCAATATT--ATTGTGATCCCATTTTTTCCCCTTTT ..:...:.........:.::....::-:.......:x.x.......x.:....:::.x..xx..xx..................:...:..................:...................................:.............................:.......................................:..x.....x........x.x:....:.:..:....x..::x....x...:.:x...--------:.x.x.x....:.:x:..:x.xx.--------------...:x...xx:..x...::x....--------.:x:.:.x.x.x.:.......xx.:..-------------..x.....x.:...x......x...............:...............:........................................:........x..........................................................................................................................................:................................................................................................x...............x..:..:..:.:.:.........x...........x...x.........:--.:..x...x....--:..:.:.......--.xx.:x..:x.x...x..:.:..:.. 26M1D243M8D24M14D24M8I27M13I405M2D13M2D13M2D26M 688/801 85.9% 822/94230402 0.0% 50/801 6.2% 33089573 NA +23039 chr4 + 190214555 79713844 79713843 79714360 517 ACAGCAGAATTGGTCCTTTTAAACAACGTCTGCAGCCTCTACAGAACAGAACATAGGGTATGCAAGGAGGCATTAT-CTTTTACAGAGCTGTGCATCCCCCT-ATGCACTATCTCCTCTTAGCCAGTTGCCTGAATG--------------TGGAACATCTGTGTTTATTTTGCATGAGGAAGTTGTTCCTTGGCTTTGCCAAAATGAGCTTTGATGTGGGACTCTGGGTTTGTGGATTTTCCGTAGGGTGATGATAAAGCTCAAGTGGCAGGACATTGTTTTTGTATATAATGCATATTACATGAAGTCATCCATATTTAATGACAAGTGTGCTATATTTTTAATCTTTATAGCTTTAATGTGTGCGAGAGATTTTAATAATTGGTGCTGGGATGATGGTAACGTCCCAGAAATGCTCAGCACAACTGCTGTGGTTCTCAGCCCACAGTTTGCACAGGTTGTAAATTATGAAACTTGATTAGCAATAGACTTGGCA-ATATCTCTCATCTTTTGAAGATGCCAATCTGTAGCA chr4 + 94230402 46604927 46604926 46605455 46604927 46604926 46605455 529 ACAACAGGATATGTCCTTT-AAATGACTCATCCAGCCTCAGCTGATGCCGAAGTACAGTATGTGCAGAGACGGTAGACTTGCACTGAGAGGCATATTTTCCTTAAGCACTTTCTTTTCCTAGCCA-TTGCCCGAAAGCTACAGTCAGTGCTTGGAACATCTGTGTTTATTTTGCATGACAAACTTGTTCCTCGGCTTTGACAAAATGCGTGCTGATTTGGGACTTGGGGTTTGCAGTTCTTCCATGGGGCTGTGCTGAAGCACACACGGCTGGCCATGGCATTGGTATATAATACATATTACATGATTTCATACATATTTAATGACAAATGTGCTATATTTTTAATCTTTATAGCTTTAATGTGTGCAAGTGGTTTTAATAATTGGTGCT-GTAGGATAGTTACTTCCCAGAATTACCCTCCGAAATTGCTGT-GTTTTCAGCCTTCCA-TTGTGCAGGTTGTAAATTATAAAACTTGGGTAGTAATGAACTTGGCACCCACTCCTTGCTCTTTAGAGATGCCAACCTGTAACA ...:...:..xx.......-...::..x:x.x.......x:.x..xxxx:.x:..x:.....::x:...:.:x..x-...x:..x...xx.:::..:::...-.x.....x...::..:......-.....:...x.--------------...........................x:..x........:.......x.......x.:x:....x.......:x.......::.x.:....:.:...:x:..x.:....x..x::...x..x...x.:x..x.........:............xx....x...............:......................................:..x.:.................-.x.x...:..x..x........x.:.:.xx.:x..:......-...:......:x.x:-...::...............:.......:x...:...::........-x:.:::..:::::...::.........:.....:.. 19M1D56M1I25M1I22M1D11M14I239M1D42M1D15M1D47M1I36M 383/512 74.8% 529/94230402 0.0% 22/512 4.3% 33108917 NA +3843 chr4 + 190214555 79730600 79730599 79730761 162 CATATATATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATATATATGTATATGTATATATGTATATGTACATATATTCCACTAATTCTGTCCC--ACTAGAGAACCCTAATACAACAACCTTAACCAATTTTGTAGAAAACTCTGGT chr4 + 94230402 22600199 22600198 22600355 22600199 22600198 22600355 157 CACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAATCCTGATCTGCTTCTACTT-TGTTCCAAATTAGAAAACCTGGA------AAGATTAACTAAATTCACAGGTATTTATAGT ..:.:....x:...::..x.....:...:...x.x..........x...:.........::...:.::.:x:.:xxx..:x.x:.x.xx..x.x.:x...x..-...:..--.:....:....:x:.------..xx.....:..x..:::..:x.x:.x.:.. 103M1D6M2I15M6D31M 99/155 63.9% 157/94230402 0.0% 9/155 5.8% 57130401 NA +20190 chr4 + 190214555 79745481 79745480 79745824 344 TTTATCAAGACCTCTAAGGTTGTAT----TTTTACTGATATTTTTAAAATAAATTCTGATAACATCAAACCTATAAAACGTTCATCACAGACC-AAATACCTCCCTAACCTTTTAAGCTTTCACAGTAAAAACTGTCTTTTTTATTTATATAAGTTTGAGAAATATACAAATGTAATCATAACCCCCAAAGCAAAATTTTATGGCAATTTTCAGAACTCTTCACTATAAAAACTACTCAAACCTACAAACATAAAAGTTTCCAATAAAATTTGTTTTAGATACTGGCAATAAAACACTCTTTGCTTGCCTCTTAACTCCAAATTTTGGAGCCACAGCTGTCCAAATGCC chr4 + 94230402 46611093 46611092 46611430 46611093 46611092 46611430 338 TTTATCAAGAAATGTAAAGttatatatttttttattgatattta-agaataaattCTTATAACATCACATCTATAAAAGGTTCATCACAGACCCAAATGCCTCTCTAACCTTTTAAGCTTCTACAGTAAAAACTGTCGTCTTTATTTATATAAGTTTGGGAAAGATACAAATGTAATCATAACCCCCAAGGCAAAATTTTATGGCAGTTTTCAGAACTCCTCTCTATAAAAACTACTCAAACCTACAGGCATAAAAGTTCTCAATAAAATTTG-TTTAGATGCTAGTCGTAAACCCCTGTCT--CTTCCCCTTGGC-------TGTGACACTGCAGGTGTCCCACTGCC ..........xx.x...:...:...----.....:........x-.:..........x.........x.:........x..............-....:....:................::...............x.:..................:....x.........................:................:............:..x........................::..........::............-.......:..:.:x:....x.x..x.:.--:.x..:...::.-------.x..:x:.::...x.....x.x.... 25M4I15M1D48M1I179M1D28M2D12M7D26M 282/333 84.7% 338/94230402 0.0% 16/333 4.8% 33134388 NA +8580 chr4 + 190214555 79755702 79755701 79755936 235 ATTCATTTAGTACTTTACTTCTTCTGGTTTATCTAAAGCAGCACTACTGTATAATTGCTTTTGTGCTTTCCCATTTGCTTTTTTCTTGTAAAAGAAAAAAGA-ATGAGAATATTAACAAGCCAGCTGTTAGCACTTCTTTGATATTTCCCTATGGTCTGCTCCATTAGAGGGGGCTAAGTTCTTAATAACCATTGGATTTGTTAATTATTGGTAAACAGTGGTCTACGAATTTGGA chr4 + 94230402 46614059 46614058 46614281 46614059 46614058 46614281 223 ATTCATTAGGTGACTT---TTTTTTTGTTTATCTTAAAATAGACT------TAATTACAACTCTGCCTTCCCATTTG----TGTCTTACGTAGGAAATTGGCTCTCAGAGTATTAACAAGCCAGCTGTTAGCACTTCTTTAATATTTCCCTGTCTTCTGCTCCATTAGAGAGGGCTGCATACTTAGTATCTGCTAGGTTTCTTAATCATTAGTTAACTCTGCTTTATGGATATTGA .......x:..:x:..---.:..:.x........x..:xx:x...------.....:.xx:.x...:..........----.x....:::x.:....xx:.x-x.x...:..............................:..........:.xx...............:.....:x:.x....:..x.:::.:.:...x.....:...:..x...xx..x.:..:.:..x.x.. 16M3D26M6D26M4D21M1I133M 161/222 72.5% 223/94230402 0.0% 14/222 6.3% 33141643 NA +14135 chr4 + 190214555 79757003 79757002 79757376 374 AAGTTGACCACTTC--CCTAATTGGAAAATTTACAAGGCAATAGATTTCTCTCCACCTCTCTGCATGTATAGGTCCATGGA--GGACAACAAACTGAAATGATCCTCCCTCCTGGAACCAATATGGAGGCAAT--ATGAAGTGCAGGCATATCCCCTGAGTCCTAAATGGCCTTCAGCAGACATGTCCTAATGAAGCAAAGTTAAAAATTGGTAATAAATTAATAAGAATGTGCCTCTTAGTGACAATCATCCATCCATTTCCTCTTAGAGCACCTTTTAATTATTGTTACCAATGACAGAGTTTGGGGGTCACTGCTTTC-------ATAAAAGAAGAAAACTTTTCTGCTCTCAAGTCAGTAATGTATAGCCTTTGCATTCTTCA chr4 + 94230402 46614988 46614987 46615352 46614988 46614987 46615352 365 AAGAGGGACACTTCTGCTTGATTAGAAGACTGACAAGCTGATAAATTCC-------CTGGGTACACATGCAAAACTGTGCACTAGCCAACAGATCTTTCTTGCCTTCCTACCTCATGACAACACCAAGGGAGTCAGTGAAGTACACAAATATCCCCAGAGTCCTAAACGGCCTTCATCAGACATGTCCTAATGAAGCCAAGTTAAAAATCTGTAGTAAATTAATGAGAATGTTCCTTTTCGTGGCAATCATCCATACACTCCCTCTTATGGCACCTTTTAATTATTGTTACTAATGATAGAGTTTTTGGGTCACTGCTTTTGGTAAGAAGGAAACCAAAAAACTTCTTTCTTCT------AGAAATG---------AGCATTCTTCA ...xx.:x......--.:.:...:...:.:.x.....x::...:...:.-------..xxx.:..::.::.::x.::..x.--:.x.....:.::xxxx.x::.:...:x...x:x:x...:.:x:...x.:.--:......:..x:x........x..........:........x....................x...........:x...:.........:.......x...:..x...:...........x..:.:.......x:.....................:.....:.......xx.............:-------.x:...xx.:.......:.:.x:...------..x....---------x.......... 14M2I33M7D25M2I50M2I186M7I26M6D7M9D11M 259/352 73.6% 365/94230402 0.0% 35/352 9.9% 33142015 NA +9963 chr4 + 190214555 79766486 79766485 79766748 263 TCCTTCTTAATAGCAATGAGATCTTTTACCTAGAGATTTCAGAACAAAAGGTAAGAAAGACAATTAATTATAGCCTAGGCCTCACATGCAAAGTTAATGAATTTTAATGCATATCAATTAATAGCTAATTGGGTTTTG---CCTGACTATAGATGGAGGTGTTGG-------GTGATGAGAAGGAAAGAGGTC----------CTATTTTAGCTGAAATACAACA--GTCATTCTTC--TAGGACT--TTGTCTTCCCAGTTCTCCTTGTCTTTAAGTCAAAATAAGAA chr4 + 94230402 46618405 46618404 46618693 46618405 46618404 46618693 289 TCTTTCTTATTAACAATGGGACCTTCAACCTGGAGATTAAAGAACAAAAGCCTGGGAAGACAGTTAATTATAGCTTAAGCTTCACACACAGAGTTAATGAATTTTAACATGCCTCAATTAATAACTAATTGAGTTTTGCGCCTCAGCTGTGAATAGAAGTGTAGGGGTGTCCGGGAGAAAAAAAAAATGGGTCTAAAGATGAGCTATTTTAATTGAAATAATGTAGGGTCATTCTACAGTGGAAATGATAACCTTGTGATGTTTTCTTGTTTTTAATGGAAAAGGAAAA ..:......x..:.....:..:...:x....:......xx..........x:x:.:......:...........:..:..:.....::..:................:::::x..........:.......:......---.::::..:.::..:..:....x..-------.x..x:.:..::...x:....----------........::.......xx::.--........x.--.:.:.x.--.x::...x:x.xx.:.:.....:.....xxx....x:.:.. 138M3I24M7I21M10I22M2I10M2I7M2I41M 188/263 71.5% 289/94230402 0.0% 26/263 9.9% 33148081 NA +3130 chr4 + 190214555 79779062 79779061 79779149 88 TATATATATATATATATATATATATATATATATACACACACACACATACACACACACACATGAGTATATA---TGTATCTCATATATGTAT chr4 + 94230402 91738225 91738224 91738315 91738225 91738224 91738315 91 TATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACTTCAAATACTCAT .....x...::....:...xx...x.x.x:.x....x.x.:...:.:.x.x...:.:.............---.:..::...x...:x:.. 70M3I18M 61/88 69.3% 91/94230402 0.0% 3/88 3.4% -11959163 -82271239 +3130 chr4 + 190214555 79779062 79779061 79779149 88 TATATATATATATATATATATATATATATATATACACACACACACATACACACACACACATGAGTATATA---TGTATCTCATATATGTAT chr4 + 94230402 91734627 91734626 91734717 91734627 91734626 91734717 91 TATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACTTCAAATACTCAT .....x...::....:...xx...x.x.x:.x....x.x.:...:.:.x.x...:.:.............---.:..::...x...:x:.. 70M3I18M 61/88 69.3% 91/94230402 0.0% 3/88 3.4% -11955565 -82274837 +3443 chr4 + 190214555 79779899 79779898 79779990 92 AGAAAGAAAAAGAGAGAGAGAGAGAGAAAGGAAGAAGGAAA-----GAGAGAGAAAAAAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ........:...xx.x...........:..:.....:x.:.-----:::.xx....x::..x.x:..:..x:...:.:...:..:......:.:.:. 41M5I51M 62/92 67.4% 97/94230402 0.0% 5/92 5.4% 28631520 NA +3014 chr4 + 190214555 79779914 79779913 79779991 78 GAGAGAGAGAGAAAGGAAGAAGGAAAGAGAGAGAAAAAAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAA chr4 + 94230402 75176442 75176441 75176519 75176442 75176441 75176519 78 GAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ..::x.....:...::...:.....:x.:.:.xx..:....::.:...x...::..xx..x..::..x...:...:.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 4603472 NA +3206 chr4 + 190214555 79779944 79779943 79780026 83 GAGAAAAAAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAGCA chr4 + 94230402 86089085 86089084 86089167 86089085 86089084 86089167 83 GAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGGGCA .....:::...:.:x.x...:..:...:...:.....x.:.::::.x::.x.::.....:...x..x....:x:...:.:... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% -6309141 -87921261 +3107 chr4 + 190214555 79779953 79779952 79780021 69 AAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAG----AAAAGAAAGAAAGAAAAGAAAGAAA chr4 + 94230402 38078781 38078780 38078853 38078781 38078780 38078853 73 AAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ......:.:.............:.::.:......x.x...::.:----x.x...:.:..x.:...:...:... 44M4I25M 50/69 72.5% 73/94230402 0.0% 4/69 5.8% 41701172 NA +8113 chr4 + 190214555 79782336 79782335 79782535 200 TAACTTTCTTTTCACAGTATCTGATGGGGCACTGCCTCGTGTACTAAAAATGGATGACTTCCCAAAGTGTGGCATATCTTTATTTCTTGGCTAGCTTCCCATGTAG---AGAAATAAGTGTTCA---TAATTATCTGAAGGAGAGTTTTTGCATATTACTCTTTAAGCATATAATTATCTCTTATATTTTGGGAAGCATTTTATGT chr4 + 94230402 46619202 46619201 46619399 46619202 46619201 46619399 198 TAACTTTTCATTTA-GGTTTTTGACAAGACACTGCAGATTATA--AATAATGGATGAATTCCCAAAGTATG-----TCTGCACTTCCTGGCTAACTTCCCACATGGGTGAGCTGTGAGTTTTCTCCTTAATTATCTGTAGGAGAACCTTTGCATATTGCTCTTTAAGCATATAATTATCCTTGATCATTTGGGATGAATTATATGT .......::x..:.-:..x.:...:::.:......xxxx.:..--..x.........x..........:..-----...x:.:...:......:.......::.:.---..xx:.:...x...x---..........x......:::..........:.....................::.x..xx.......x.x...x..... 14M1D28M2D26M5D30M3I15M3I79M 146/192 76.0% 198/94230402 0.0% 14/192 7.3% 33163134 NA +24767 chr4 + 190214555 79784880 79784879 79785485 606 AAATATGTTCAGTTGAAATGGATGCCTACGGTCTTTCTGATGATTGAAGGAAAAATTTATATAT-AGACTTTCCT------ATGCAATCTCTAAAGGATATTTATCAGCAATTTTACTGATCGATGACCAAAGGTTTATAAACCCACA---------------------------------TGCTATTAATT------------TTTAAGCACCAAAGGATAGGAGAGTGATAATAT--GAAAAAGAAAGAACTCATTA--GTTTTTAATAGAGCATTGAATGGCACACATTTTGCCAT-CCAACTATTTATCCAGGGCTTCTCACCATGCTCCTCAAAACTGCTGCACAATAAATAATAAAAGATTAAAACCCTAAACCTGGAAAACTTAG--AAAAAATATTAGAAAATTTTATTTGAGATTATAAAAATCCTCAAATGATTTACTTTAAGAGACACCTTCATTGCTTCCATGTGCAAGGACTAATGATGTCCTGGGGCTGAGGACTGGCGAGAGTGCTGCTTGGGAAACATAGTCTGTGGTAGGTGATAAAGCAGGCC-CTCCACACGGCTCTCTCACTGTCACCAGCCTATCTTTTTACCATTTGTTACAAAAAAATGATAGTTCATGTACATATTTATATATCTGGACTGTTATAACCCTG chr4 + 94230402 46620082 46620081 46620728 46620082 46620081 46620728 647 AATTGTGTTCTTTTGAATTTGATACTTTAAGT-------GTAAAAAAAAAAAGAATATATATGTTCCATTCTCCTCCTTCAGTAAAATTTATCAAGAATATTTATCAGCAGCTTTA---------GCCACAAGGCGGGAAAATACACAAAAGCCAAAGAGTAGCATTAGTTTGTTTTGTTTTACTATTACTGGGTTTTGTTCAATTTGAACACCCTCAGAAAGAGCAATGAGATTATAAGAGAAAGGAAAAAATCATTAATGTCTTAAATGCAGCATTGTCGTGCACCGATCCCTCAGTGTCAACTATTTACACTGAGCTTCTCATCATGCCCTTCACAACTGCCGTACAATAAATAATAAAAGATTAAAACCCTAAACCTGGAAAACTTAGGAAAAAAATATTAGAAAATTTTATTTCAGATTATAAAAATCCTTGAATGATTTACTTTAAGGGACAATTTCATTGCTGCCATGTGCAAGAACTAATGATCACCCAGGGCATCTGATTGGCGAGAACGTTGCTTGGGAAACATAGTCATAGGTAGGTGATAAAGTAATCCTTTCTCCATGACTGCCTCTCTGTCACCAGGATATC-TTTTACCATTTGTTACAAGAAAATGATAGTCCACGTACATATT--TATATCTGGATGGCAATAACGTTG ..x.:.....xx.....x.x...:.:.xx:..-------:.:.xx:..::..:...x.....:.-xx.:.:....------:.:x...:.x.x...:.............::....---------.x.xx....:xx:x...:x....---------------------------------.:......x.x------------...:.:....xxx:..x..::x.:...x.x...--..:....:..:..x......--..:..x...:x.......xxxx....xx..:::x.x:.-:..........:x.x.:........:.....:.:...x......:.:.............................................--........................x................::................:....x:.........x...........:.........xx..::....xxxx..:........::.:..................xxx..............:.:x..-:..:x..:.:..x:...x..........xx....-..................:...........:..:.........--..........:x.:x.....x:.. 32M7D25M1I10M6I35M9D23M33I11M12I33M2I20M2I38M1I92M2I167M1I34M1D43M2D24M 451/587 76.8% 647/94230402 0.0% 79/587 13.5% 33164798 NA +3169 chr4 + 190214555 79786581 79786580 79786654 74 AAGAAAAAATGCATTTTTCTATCAACTGCTATTAGAAAGAAAAAAAGAAAGAAGAAAAGAGGGAATAAAGGCAA chr4 + 94230402 64564346 64564345 64564419 64564346 64564345 64564419 74 AAAGAAAAGTTTAGTGCTTTTTAAACAGGTAGTACAAGGGAAAAAAAAAAAAAAAAAAGAGGGAAAAAATGCAA ..::....:.x:.x.x:.:.x.x...x.x..x..x..:.:......:...:..:...........x...x.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 15222235 NA +3951 chr4 + 190214555 79796198 79796197 79796413 216 TCTGCTAACTCTTCAATTCTCTGCACATCGGACACATTAGGCTTGCCTGCCTGCCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTC-----TTTTCTTTTTCTTTTTCTTTCTTTTTTCTTCTTTTCCCTAAACACTTTTCTT----TCTTTCTCTCTCTCTTTCTTTCTCTCTTTCTCTCTTTCTTTCTCCCTCCCTCCCT chr4 + 94230402 22118210 22118209 22118422 22118210 22118209 22118422 213 TTTGGCAGTACTTCCATTCCCTTC---CTGGACTCACATTCTTTCCCATGCTGCTATCATTTTTTTGTGATATTTCTTCTCATGTCCTTAGTACCTCTTCTTTTCTTTCAAACCTTTTCTCTCTCCATTTCCCACTTTTTATTTGGT---------CACTCTTCTTCTTATCTTGCCATATGTTGTTGTTTTGTACCTTCTCTTTTTTATTCTCCCTTCTTCTCT .:..x:.::x....x....:..x.---::....x..:xxxx:..x..xxx....:xx.x...:...x.xx:x..::....:x:x.:...xx.x:.....::........-----......:.:..:x....::x......x:..xx.---------....:.....----....x.:x.x.x.:x..x...:x:x.:......:...:x........:.:..:.. 24M3D82M5I33M9D10M4I55M 128/204 62.7% 213/94230402 0.0% 21/204 10.3% 57677988 NA +3072 chr4 + 190214555 79796283 79796282 79796333 51 TCTTTCTTTCTCTTTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTCTTTTTT chr4 + 94230402 13063277 13063276 13063327 13063277 13063276 13063327 51 TCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTTT ..::.x..:..........:...:.........:..x..:..:..:.:... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 66733006 NA +3040 chr4 + 190214555 79796285 79796284 79796341 57 TTTCTTTCTCTTTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTCTTTTTTCTTCTTTT chr4 + 94230402 90927825 90927824 90927881 90927825 90927824 90927881 57 TTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCTCCT ..:..::.:.x......:...:........:xx.......:.:...:....:..::. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -11131540 -83098862 +3023 chr4 + 190214555 79796296 79796295 79796344 49 TTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTCTTTTTTCTTCTTTTCCC chr4 + 94230402 34797283 34797282 34797331 34797283 34797282 34797331 49 TTCTGTTTTTCCTTTTTTTTCATTTTTCTTTCTCTTTCTTCCTCTTCCC ....x.:....:...:....:x...........:...::.:..:..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 44999013 NA +3267 chr4 + 190214555 79796296 79796295 79796388 93 TTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTCTTTTTTCTTCTTTTCCCTAAACACTTTTCTTTCTTTCTCTCTCTCTTTCTTTCTCTCTTTC chr4 + 94230402 45442944 45442943 45443036 45442944 45442943 45443036 93 TTCTTTCTTTCATTACTTTTTTTTTTTTTTTTACATCTTTGAATTCCTTTTTAAAAAGTTCTGTATTCCTTTCTCTTCTTTTTCCTATCTTCC ...........x..x......:.....:...:x:x.:.:.xxx..:.::.xx.x.xxx....x.x..:..:.....::..:..:..x....:. 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 34353352 NA +3247 chr4 + 190214555 79796354 79796353 79796454 101 TTCTTTCTTTCTCTCTCTCTTTCTTTCTCTCTTTCTCTCTTTCTTTCTCCCTCCCTCCCTTCCTTCCCTCCTTCTTTCTTTTCTTCTT--TTCCCTAAACACA chr4 + 94230402 83326934 83326933 83327036 83326934 83326933 83327036 103 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCTGAAACTCA ...:..:x...x.:x...:.x.......xx.:::..:.......:.:..x:..xx::.:x.:...x.x.::....x.........::.--..:.:x....x.. 88M2I13M 65/101 64.4% 103/94230402 0.0% 2/101 2.0% -3530580 -90699822 +17446 chr4 + 190214555 79854766 79854765 79855132 367 ATACAAAATTAATTATAGCATAATAAAATCCAATAGCATTTGTTCTTAATTCTCCTCTGA-TCTGCATTCTGTTGTTTATTCCCATTTGTTCTGATAAGGTCCGTTGTCTCTAATGTTGCTTTCTAAAGGGTAAGAAATAAATCAATGGTACTTAGCTTTTCTAACCATCTGGTCTGGCAAACATCCCAAAATTAATGTTTAAATCCGGGTGCAGTTCATGTATTTTTGTCTTGTGTTAGGGAACATCTCTGGAAGTAGGGAATGAAGGGTAAGATTTGCTCT--CTAATTTCA-CTGAGAAATTTGGCCTTTTTATACATATCACTCTGTAAATATTATAGATTTCCATTACATGTTATGTGGTTCAGTT chr4 + 94230402 46631550 46631549 46631911 46631550 46631549 46631911 362 ATTCAGAATTAATCATAGCATAATAGAAGCTGGTAGATATGGTTGTTAATTCTCTATTGAGTCTGCATCCCCATGTTTATTCTCATTTGTTCTGATAAGGTCCATTGTCTCTAATATTGCTTCGTAAAGGGTAAGAAATAAATCAACGGTATTTAGCTTTTCTAACCATCTGGTCTGGCTTACATCCCAAAATCAATTTTTAAGT-TGAGCACAGTTCATGTATTTTTGCCTTGTAATAGAGGATGTCTC------CAGGGAGAGAAGGGAAGGAGAAGTTCCTACTAATCTCACCCCAGGGATTAATCACTCTCATAGACATCGCACTTTAAACTCTACAGGTTCTTGCTGC-TGTTATA-GCTTCAGTT ..x..:.......:...........:..x.:::...xxx.x...x.........:x:...-.......:.:xx.........:....................:...........:......:x......................:....:...........................xx............:...x.....:.-:.:.::.................:.....:x...:.:.::....------:.....:x......x.:..xxx.:..:--.....:...-.:x..::...x:x.x:.:.:...x.:...:.x..x....:x:..:..:..:::::.:.-......:-.x....... 60M1I144M1D44M6D27M2I9M1I58M1D7M1D9M 275/358 76.8% 362/94230402 0.0% 13/358 3.6% 33223216 NA +15264 chr4 + 190214555 79862930 79862929 79863179 250 TGACCTAAATTGAGAAAATAGAGGGGCTGTGTGGACAAGGAGAGAGAAGAGAGCATACAGCTGCCCTAT-GCCGTTGCTCTGTTCACAGTAAGGATTGAGCCATTCTAATCCCCTTGGATTTTTTATCTACCAAAACAGCTTGGGCCCATCAGCAAATTGCAGTGGCATATGGTCCAGGTTTACGAGTAATCTGGCACATGATTAAGGCAAGG-GGGATGTCATCTTTCAGCAAATACTGAAAATATTGTAG chr4 + 94230402 46633372 46633371 46633599 46633372 46633371 46633599 228 TGACCTAAATTGAGA-----------CTG-------------AGCAAAGAGAGCAAGCAGCTGCCCCACCGCTGTTGCTCTGTTTTCAGCATGGATCGAGCCTCCCTAATCCCCTCGGATTTTGTATCTACCAAAACAGCTTGGGCCCATCAGTAAATTGCAGTGGCATATGGTCCAGGTTTATGAGTAATCTGGCACACGCTTAAGGCAAGGAGGGACGTCATCCTTCAGCAAATACAGAAAATATTGTGG ...............-----------...-------------..x:.........x:.........:.:-..:...........:x...:.x....:.....x::..........:.......x.............................:.............................:...............:.x...........-....:......:............x...........:. 15M11D3M13D27M1I143M1I38M 201/226 88.9% 228/94230402 0.0% 26/226 11.5% 33229558 NA +3846 chr4 + 190214555 79896834 79896833 79896918 85 ACTCTTTTTTTGTTGTTGTTGGGACTCTTTTTTGTTGTTGTTGTTGTTGTTGG--GACTCTTTTTTTGTTGTTG---TCCAGGGTTTTTT chr4 + 94230402 6481180 6481179 6481267 6481180 6481179 6481267 88 ACTTTTTTTTTTTTTCTGATGGATTTTTTTCTTGTTGTTGTTGTTG--GTTGGTTGACTTTTTTTTCGTAGTTGCCTTCCAGAATTTGTT ...:.......x..x:..x...:x:.:...:...............--.....--....:......:..x....---.....::...x.. 46M2D5M2I19M3I13M 67/83 80.7% 88/94230402 0.0% 7/83 8.4% 73415654 NA +3180 chr4 + 190214555 79896859 79896858 79896926 68 TCTTTTTTGTTGTTGTTGTTGTTGTTGGGACTCTTTTTTTGTTGTTGTCCAGGGTTTTTTC---ATTGTAA chr4 + 94230402 153492 153491 153562 153492 153491 153562 71 TTTTTTTTGTTGTTGTTGTTGTCGCTGTAAATTATTTTTTTTTTTTGACCAGCCTTTTTACTGGATTATAA .:....................:.:..x:.x.:x......x..x...x....xx.....x.---...:... 61M3I7M 53/68 77.9% 71/94230402 0.0% 3/68 4.4% 79743367 NA +3107 chr4 + 190214555 79897110 79897109 79897167 58 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGGGAGGGAGGGAGGGAGGGAGGAAGGAG chr4 + 94230402 10675421 10675420 10675476 10675421 10675420 10675476 56 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGG--GGGGAGAAGAAATGAG ..:.:....::..:......:......:........x...--...::.:..:..x... 40M2D16M 43/56 76.8% 56/94230402 0.0% 2/56 3.6% 69221689 NA +3375 chr4 + 190214555 79903349 79903348 79903387 39 TTTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:...................x................ 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 4655299 NA +3031 chr4 + 190214555 79903350 79903349 79903387 38 TTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248047 75248046 75248084 75248047 75248046 75248084 38 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACA .:..::.................x.............. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 4655303 NA +3276 chr4 + 190214555 79903351 79903350 79903387 37 TCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248050 75248049 75248086 75248050 75248049 75248086 37 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACA .::.................................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 4655301 NA +3193 chr4 + 190214555 79903352 79903351 79903388 37 CTCTCTCTCTCTCTCTCTCTCACACACACACACACAA chr4 + 94230402 12601304 12601303 12601340 12601304 12601303 12601340 37 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAA ...................x.....:........... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 67302048 NA +3125 chr4 + 190214555 79903354 79903353 79903387 34 CTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601337 12601304 12601303 12601337 34 CTCTCTCTCTCTCTCTCTCACACACGCACACACA .........................:........ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 67302050 NA +95033 chr4 + 190214555 79905553 79905552 79907480 1928 AAGAAATGGTAGCACAGGCATAGGTAAAATTTTTATTTATG----AATGTGTGGACACATGACTTTGGAT--CCAGCCAGCCAGTGACATAAATAAACTTGAGCAAAAGTTTCAAGCTAGAGGATATATATGTATAGAAAATTATATATTTGTGTGTGTGTGTAAGGCCTCTTGGAACAGTGCCACAAACCTGGACACCAACCAACAGAAT-ACTCCCGTCCTTTGAAATTTCCATTAAGAGCACAATGGGGGTAATTATACCAGGATGCTCCA-ATCGCTCTTTCCATCTTGTGCACTCACATGCCCGCCAAACATGAAATGTTCGCCTTCTCCCTTCCAATGTGATGGTTGTTGAACTTATTTTTAGTGTCATTTGATAAGCCTTTGTGCTCACAGAGAGACATCCCACTGACCCAGCCACTGGTCATTGTCTATACCAGTTCACATCAAAGCAGGCGCACTTTGTCAGGTTTCCACTCGAATATCCATTTCGCATCTGAAGTACAGTATCGAAAGTGACTAGATCATTTGAGCTTTTTTCTTCAGCTGCT---GCCTTCCTCCCCCACGGTGTTTCTGCTCACGCTAACATAATTTGGCATCGTCGACGTGACACGATGGTGGTTTTTCTAAAAAATTATAATACATACATCGTCAATGTTTTGTGATAG-CGACCCTCCAGAAGATTTAATTTGTAAATTGAAGAAAGGTGGTCTTTTTCCTCTACTGAATCATAACCAAGGTAGAGTG-CCCCTCAAAATCCAAGTAATGCGCATACAGTAATAGGTCATTCAATGTCAAAAGGCATAAAAAAGATGAGCAAAATCTTCACAGGCTGCTGCTTGCTGTTGCTTTTAATTATATTAATTAAACTTTGAAATTTTAATGCAAAGAGAGTTGCTGGCTTGTGACGCTGAAGAGCCCTTGGAGACTTGAAGAAAGAAAAAACCCTGAG-CGGAAGCTTTGTGGTTACTGCTTCCTTTAAATTAAAAGCAAAACAA--------------ACTTCTAGGTATGTTTATGGATATTAATGCTTTATGCACTACTAAATCCTAAACACAGGAAAAGGG-GGAATCTACTAGTCACAGGGACAAGTTCGCAAAAAATGAGTCCCTTGCACTACACTCAAGATCTCTGGCTAGAGG----CCTTCTGTGGAATAACGCTCTATTAATTTTCT---TGTCCCGAGTGCATAATGAAAGAAAGGTGTCTTCGAAAACTAAAGGGCAAAATCTTGCTTGCTACCAATACCTTGAGGCATCTTGTCTACATTTTGTCATGCGTGTGCACTTTTCAGTGTTAGAATGACAAGATTTTCCAGTCAGAAACTTCCCATAAGGCACACTGTGATAGAGCACTTGGAAGGATTCTGTGATCTGACATAGCTATAAGGCAATGGACTTCTTTATTTGCTTAGCCTGGTGGGAAATTTCATACTCTGCCTATGGATAAAGAT--CTTGCCACATAAAAACACAAGTGCCATGTTTCCATGTAAAAAACTCC-TGTCTCC----------CATCATGGCTAGTTGTTTTGTGGTCCTT------GTTTTGG--------------TATCATCTTCGTGTTGTTGCTGTTGTTGCTTTTTCCTCTTCTACACATTCAAACAAACTTTCTTGTACAAACCATAGTCTGCAGGTCAATGTTCCTCTTTATTTTCAATGTCATAAATCATGAGTTACCACTGAGTTTCATCACCTCCCATGTA-GATGGCAGAACA--AGTGTTT-----AGAAATGTTTGGTGCAAGCAAAGCAGAAGGCAGAGAAAACATTTCCCGACTGAG--AGGAATTAAGCTGCTCTTCCAAAAGCTTCTGAAATGCACTTGATTTTTTTCATTTGGTTGAAAATCAGCTATGTGAAAATGTGCCATCTTCGTACCTTCTTGGTCTTCCTGCTTCCCTTTTACTGAGATGGAACTCGGGAGAAGTTTATGCACCGGCCCTGAAGAAAGAAA chr4 + 94230402 46644395 46644394 46646284 46644395 46644394 46646284 1890 AAGAGATGCT--CACAGACTTAGGTAATCACTTTATTTATAGCGTAATGTGC--ACACATGGTTGTTGATGATGAGGCTACCAGTGACATAAATAAACTCAAGCAAAAGATGTAAGCGAATGGATATACATG-------------------------------AAGGCTTCTTTGGGCAGTGCCACGAATTTGGACATCGACCAAAAGAATTATTTATGTCCCTTGTGATTTCAATGAAGAGCACAAAGGAGATAATTAGACCAGGATGCTTCGCATTGCTCTTTCCATCTTGCACACATTCATGCCCACCAAATGTGAAATGTTCGCCTTTTCCCCTCAAACGTGATGGTTGTTGAACTTATTTTTAGTGTCATTTGATAAGCCTCCCTGCTCGCAGAGAGACATCCCACTGACCCAGCCACTGGTCATTGTCTATACCAGTTCCCATCAAAGCAGGCGCGCTTTGTCAGGTTTCGACTCGAATATCCATTTTGCATCTGAAGTACAGTATCGAAAGTGACTGGATCATTTGAGCCTTTTTCTTCAGCTGCTCCCTCCTTCCTCCCCCACAGTGTTTCCGCTCACGCTAACATAATTTGGCATCATCGACGTGACACGACACTGGTTTTTCTAAAAAATTATAATACATACATTGTCGATGTTTTATGATGGCCGGCGCTCCCATAAATTTAATTCCTAAATTGATGGAAGGAGGTCTTTTCCCATTGCTGAATCTTAACCAATGCTCGGTGCCCCCTCGAAAACCGAGTAATGCACATACAGTAATAGGTCATTCAATGTCAAAAAGCATAAAAAAGATGAGCAAAATCTTCACAGGCTGCTGCTTGCTGTTGCCTTTAATTATATTAATTAAACTTTGAAATTCTCATGCAAAGAGAGTTGCTGGCTTGTGACGCTGAAGAGCCCTTGGAGATTCGGGGGGGAAAAAAACCCTGAGATACCAGCTTAGTGGCTACTGCTTTTTTCATCTAAAAA--AAAATAATACATAAGCCTACTACTGCTAGGTATGTTTATAGATGATGATGTTTTATGCGCTACTGAACTTTGAATGCAGGAAGGGGGAAAAAACCACCAGCCACAGTGTCAAGGTCTTGAAGCATCAGTCCCTCAAACTCCGCTCAAGATCTCTGGTTACAGGCTGTCTTCCTGTGCAATAACGCTCTATTAATTTTCTTCCTGTCCCGGGTGCATAATGAAAGAAAGGTGTCTTCAAAAACTAAAGGGCAAAGTCTTGCTCGCTACCAATACCTTGAGGCATCCTGTCTACATTTTGTCATGCGTGTGCACTTTTCAGTGTTAGAATGACAAGA-TTTCCAGTCAGAAGGTTCCCGTAAGGCACAGTGCGATGGGAGACTCGGAAGGATTTTGTGATCTGACATCGCTGTAAGGCAGTGAACTCTTGCGTTTGCTGAGCCTGGTGGGAAGCTTTATCCTCCGCCCATGGCAAACAGTCCCTATTTACATA-----ACACGTGCCGTCTTTGCGTCTGAGAAACTCTGCATCTCCCCTAAAAGCACATTATGTCCTGAGAATTCGCAGTCCTTAAAAAAGTAATGAAAATAGAAAAACATTATTATCTTTG-GTTGT--CTGTGCTCTCCCTTTTGTGTTCTATA-----AAGCA-------------GAGGCATAG-----GAGTCAATGCTTC------TTGTCACTGTTGCAAGTCACGGAGTAAGA-------------------GTGTACGGTGGTGGAACACGAGAGCTTGGTGCAGTGATGCTGGCTCCTGGTAGCG-GGAATGCAGAAA---------CCTTCTGAGTTCGGGCTGAAGGTGCTC--CAAGAAACGTGCGGAA-GTGCTTGGTTCTCTCTGCTTGGTTGGAAAGTGGCAGTGTGGTTGTATTTCCTCCTTGTATCCTCTT----------CTCCTCCTCTACTGAGACTGAACTCGGGTGAAGTTAATACATCGGCCCTGAGGGGGGAAA ....:...x.--.....:.x.......xxx:.........:----......:--.......::.x.x...--:x..x.x:...................::........x.x:....x.:x.......:...-------------------------------.....:....x.::.........:..::......:.:.....x.....-.:.:x:....:...x:.....x..x..........x..:.:......x...........:.:-..:...............::...x:x.......:.....::...............:....:..x..:...........................................::x.....:..................................................x...............:..............x................:.............................:............:................---x..............:.......:.........................:..............::x...............................:...:.......:....:.-..:.x....x:x.:........:x........x.:....x........:..x:.:.......x.......x.:xx:...-......:...x..:........:..............................:................................................:.............................:.x..............................................:.:.::.::::.............-::xx.....x....:........::..:.xx.x....--....:..--------------...x..............:...:x.:...:.......:.....:..:::.:..::......::...-::..x.:..:..:.....x.x....x..x::..:x..x.......::x...x.:..............:..x...----.:.:.....x......................---.......:..........................:................:.......:......................:..................................................-.............:x.....:.........x..:...:.::x...:.........:.............x...:.......:..:...::.x::......x.............::..:..x...:...:....xx..x::.--..xx::.....-----...x.....:.x...x.:.x.:.:......:-::.....----------...:...x.:x.xx:x..:.::......------..xx..:--------------...:.....:.-.....--....xx.:x.::...:x.x.....:.-----..:..-------------:.:x.....-----::.......:.:.------..x...x...:::..:...:.::x..xx.-------------------:....-.:...::.....--..x.:..-----..x:...:.x.x.x.x:.:.:x.-:...x.....:.---------..xx.....--x..:x.x...x.....--.x.:..:.x.x:.:..-.::....:..:.:.::::.......:...x::..x:....:xx:.:.x:.x..:.:...:.:....----------..:.:.:.:........:x.........x......x..:..:.........:.:::.... 10M2D29M4I7M2D16M2I60M31D48M1I62M1I278M3I117M1I79M1I205M1I37M2D7M14I66M1I75M4I32M3I133M1D142M2I11M5D31M1I7M10I28M6I7M14I11M1D5M2D26M5D5M13D9M5D13M6D29M19D5M1I12M2I7M5I23M1D12M9D9M2I16M2D16M1D66M10D60M 1460/1811 80.6% 1890/94230402 0.0% 196/1811 10.8% 33261158 NA +3369 chr4 + 190214555 79910369 79910368 79910451 83 CGTGGTAGCGCATGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:.:...:.--......:.........:x.:........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 3877172 NA +7841 chr4 + 190214555 79911873 79911872 79912067 195 CTTTAGGTAGCACCCACACTACT-TACTCAATTAGGCAATCAATACAACCAACTTGAATTTG---ATATCATGCCTTATAAATCATTGAATCATAAACTTTAACAATAACAACATTTAGTTAATATAAAATTGAATTAAATTAGTGT-------CTGCATTAGTT-CAAAATGAACTATAAATATATTACCTTATTTTGGTTTGGGA chr4 + 94230402 46649640 46649639 46649846 46649640 46649639 46649846 207 CCTAATGTCACACTCACGTCCCTGTACTCCATTAAGCAATCAATACAAGCCATTTGAATTCACATATATCATGCCTTGTAAATCGCTGGATCATAAACCTTAACAATACCAACATGTCGTCAGTAGAAAATTGAACTAATTTAGTATTTTAGGGCTAGAGTAATTAAAAAATGAGTTATGCAAGCATTCTGTGATCTTCATGTGGAA .:.x.x..x:...:...:::x..-.....x....:.............x.x.:.......::---............:......::..:.........:.........x......x.x..:.:..x.........:...x.....:.-------..:x.x..:..-x.......::...:x.x::...x:x.x..:..x:.x...:. 23M1I38M3I82M7I11M1I41M 143/195 73.3% 207/94230402 0.0% 12/195 6.2% 33262233 NA +12849 chr4 + 190214555 79915331 79915330 79915554 224 AGCAGCATTAACCAGAGCAAGTGTCATGT--CTCCCATCTCTTGAGCATTAAAATTCCACTGGCATTAACGCTTGTGAGCTCCTTTACTAGCTATCTGCACAGGATGTATTTCACTGCTATAACTGTTATAGTATTATGCTCACCTCATAAATATCCATTGACAAGCTGAAGCAAACAACTGCACTTTAGTTTAGA--------CTTTTCAAACACAGTTAGCTGATTTATTTA chr4 + 94230402 46652149 46652148 46652382 46652149 46652148 46652382 234 AGCAGCATTAACTGCGGCTTGTGTCACCTTGCCCCCATCTCCTGGGCATTAACATTCTACTGGCATTAACATCCGTGTGCTCCTTTACTAGCTCCCCGCTCGGGATGTATTTCACTGCTATAACCGTTATAATATTACTCTCGCCTCATAAATATCCGTTGACAAGCTGGAGCACACAACTGAAGTTAAGTTTATATAGATCTCTTTTTTAAAGATGGCTGATTGATATGTTTA ............::x:..xx......:x.--.:........:..:.......x....:............::::...x...............x:.:..x.:......................:......:.....:x...:..............:...........:....x.......x.x..x......x.--------:....:...x.::.:.:::....x.:.... 29M2I165M8I30M 178/224 79.5% 234/94230402 0.0% 10/224 4.5% 33263182 NA +3199 chr4 + 190214555 79915807 79915806 79915900 94 TGTCTCTGTCTCTGTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACATAAAGAATCTGTGCTATCTT chr4 + 94230402 4618334 4618333 4618427 4618334 4618333 4618427 94 TGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT ...xx....:.:.x.:...:x:x.::.x.......::..............x:..x.::......x.x....:.xx.x::..x.:.xx...x.. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 75297473 NA +3308 chr4 + 190214555 79915807 79915806 79915909 103 TGTCTCTGTCTCTGTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATA---TACATAAAGAATCTGTGCTATCTTTTGCTCTAA chr4 + 94230402 4618336 4618335 4618441 4618336 4618335 4618441 106 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAA ..x..x.x.:...x...:x:x..:.x.......::..............x:..x.x:......x.x....---..:.x.x.x.x.x.:.::...x.x...:x.... 70M3I33M 70/103 68.0% 106/94230402 0.0% 3/103 2.9% 75297471 NA +3287 chr4 + 190214555 79915813 79915812 79915882 70 TGTCTCTGTCTCTCTCCCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACATA chr4 + 94230402 4618334 4618333 4618407 4618334 4618333 4618407 74 TGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ...xx....:.:...::..----.::.x.......::..............x:....::......x.x..:... 19M4I51M 52/70 74.3% 74/94230402 0.0% 4/70 5.7% 75297479 NA +3280 chr4 + 190214555 79915831 79915830 79915914 84 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACATAAAGAAT---CTGTGCTATCTTT--TGCTCTAAATAAA chr4 + 94230402 26578266 26578265 26578354 26578266 26578265 26578354 89 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCTTGGTGCAGTAAGTAAA .:...................:.:.:.:.:.:x:...:...:.x.:...:.:x:....---..x....x.::..--...xx...:.... 58M3I13M2I13M 60/84 71.4% 89/94230402 0.0% 5/84 6.0% 53337565 NA +3034 chr4 + 190214555 79919831 79919830 79919929 99 AGTTCTGTCCCTCTAGAGA--ATCCTAATACA-----TATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAAAATGA chr4 + 94230402 68888489 68888488 68888594 68888489 68888488 68888594 106 AGCTCTTTCTCTCATGAAATGGTCACAGTGCAAATGATGTCTAATATGCAAATATATGTATTTATTTGTATTTGTATACACCCATATCTAGATGCAGAAAAAATGA ..:...x..:...xx..:.--:..x:.:.:..-----.:.:.x....::.x......:...x...x.:...x.:....:.:x:....x..x..::.x......... 19M2I11M5I69M 67/99 67.7% 106/94230402 0.0% 7/99 7.1% 11031342 NA +3210 chr4 + 190214555 79919848 79919847 79919923 76 GAATCCTAATACATATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATAAA chr4 + 94230402 50293970 50293969 50294045 50293970 50293969 50294045 76 GAATTTCTATAGGTATTTTAGGTATTTATAGGCATATAAATCTATATAAATATAGGTATTTATAGATATTTTTAAA ....:::x...x:.......x:...x....x::.....x..x......x.....x:...x....x....x.x.... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 29625878 NA +3476 chr4 + 190214555 79919851 79919850 79919931 81 TCCTAATACATATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAAAATGATA chr4 + 94230402 41743167 41743166 41743247 41743167 41743166 41743247 81 TTTTAAAAACTACTGCACATGTATTTTAATTTATATACACATACATCTGTATTTATATATATGTGCATTTAAAAAATGATA .::...x.xx..:.x:.:..:...x.xx..x......:.:...:..x.:...x.........:.::..x............ 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 38176684 NA +3168 chr4 + 190214555 79926865 79926864 79926919 55 GCATATATATGTGTGTATATATATGTGTGTATATACACATGTGTGCATATATGTG chr4 + 94230402 86633937 86633936 86633991 86633937 86633936 86633991 55 GTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:.x:.......x......:..::.............:x...:.....x.:.:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -6707072 -87523330 +3618 chr4 + 190214555 79926949 79926948 79927059 111 ATATACGTGTGCATATATGTGTATATATACGTGTGCATATATGTGTATATATACACGTGTGCATATATACATATGTGTATATATGTGTGTATATATATGTGCGTGTGTGTG chr4 + 94230402 21109187 21109186 21109297 21109187 21109186 21109297 111 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..x.:.x.:.:...:.:...x.x.:.:x:...:.x:....:.::x:.:......x.....:.x....:::..:.::x:..::x.x.........:.:.:..x:.:..::.. 111M 66/111 59.5% 111/94230402 0.0% 0/111 0.0% 58817762 NA +3204 chr4 + 190214555 79926976 79926975 79927037 62 TACGTGTGCATATATGTGTATATATACACGTGTGCATATATACATATGTGTATATATGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:....:.:.x:...:...x.:......:.:...::.........x...:.::..x...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -6706954 -87523448 +3398 chr4 + 190214555 79926984 79926983 79927057 74 CATATATGTGTATATATACACGTGTGCATATATACATATGTGTATATATGTGTGTATATATATGTGCGTGTGTG chr4 + 94230402 22600199 22600198 22600272 22600199 22600198 22600272 74 CACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ..:.:..:.x:.:..::.x..:::......:.x.x......:...x.:...........::...::...:x... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 57326785 NA +3148 chr4 + 190214555 79927002 79927001 79927103 102 CACGTGTGCATATATACATATGTGTATATATGTGTGTATATATATGTGCGTGTGTGTGTGTATATATATATATATATGAATATTATTCAGCCTTAAAAAAAA chr4 + 94230402 86633928 86633927 86634017 86633928 86633927 86634017 90 CGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGA-------AGATGAAGAT-----GGTCTTAGAGAAAA .::.:....:..x:..:..:.x......:...:....:......::.x:..:..::.x.....:x.-------.x.....x..-----:.:....:.:.... 66M7D10M5D14M 62/90 68.9% 90/94230402 0.0% 12/90 13.3% -6706926 -87523476 +3246 chr4 + 190214555 79934403 79934402 79934487 85 TGTAATCCCAGCTACTTGGGAGGCTGAGGCATGGGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAATGAGCCAAGATCATGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.:...........::........x.x..x...x.::.......::.:..x:xx:..:..:.:------..x..x...... 67M6D12M 56/79 70.9% 79/94230402 0.0% 6/79 7.6% 3901192 NA +8302 chr4 + 190214555 79944230 79944229 79944783 554 ATTTTCATGCCAAGCTCTCTATAACTAATTCAGCCCCTACAGAAAAATTTAAATAATGCTGAAAA-----AGTAAC-ACATTACATTAAGTATTGCTACTTTGTTATCCATTGTGACTAAAATATTGTATTATATATAGGAATAATTATTACTGTTATACTTATTAAAAACCATTAAATTACAAGACCATTTTAAACTGCTGTAGTAGGAGAAAAAT-GTTCAGATTTTTACAATATCATATTCT---GGCACCACACCAAAAACATGATGTACTGCACTGCTTGGGGGAAAAATGTGAACATGAGTTCTTATACTTGTGTATAGTTCTAATT--TGTGTGACAAATAAAAGGTATTTTTTTCAGCATTCACAATAAAAAAA--AATTGCC-----TATACT---ATGCTTGTCACAATATAAAAGTAAGCCATTGGTCT-AAGCTGTAGCCCATATGGTTG---GTACACATATATTTGTGAGTTTGGTACAACATGCTTTGTGCTGGCAATTTTAATTTCAATAGCCCATTAATCTTTTAAATACATTAAGCATGTCCACCACTGCTGGCAGACTCTT chr4 + 94230402 46665793 46665792 46666349 46665793 46665792 46666349 557 ATTTCCACATGAAGTTTTCAGTTCCACATCC---TTCTTCAGAGGAATTAGCATGGTGTTAAAAAGGAGAAGTGACTGCTTTATTTTAAGGGCCACTTCTTCCTTATGCAGGATGCTTAATATATGGAGCAGTATGCAAGAATCATTTCTCCTGGTACTATTATTAAAAATAATTA---TACTTGAACATTAAAAAACGCTGCAGTAGAAGAAAAAAAGTTCTGAAAATTACAATATTGCATTTCAAGGACTAAAAAGGAGAAAAAATATATATAGAACTAAGCAGAGACAAAAT---------CATCTCCACCCTCATTCATGTCTCTCATTATTTTCTCCCCGGTAAATGGCAAGTTTTAAAATAT-CATGGTCAGAGAACTAAAGGCCAGGTTTGCACTTGAGTGACTACCACGAAGGGCAGGCACACTGGTGGCTTGAAAAGGCAGTTCACAGGGCTGCGGGCAGACAGAA------GACGTTGGCACAATATGGGATGCATTTGCAATTT-AACTTCAATAGGCCGTTAAGCTCTTAACCACATTAAGCATATCCACCACTGCTGGCAAAACCTT ....:..:::x...:.:..x:.xx.xx..:.---::..x....::....x:x..::..:.:....-----...:..-:.x...:x.....x::::..x...:x....x..xx:..x:...x....x.x::x:...::.:....x...x:.x...x..:xx..........:x....---...xx..x....xx...x:....:.....:.......x-....x..xxx.........:::...::---.:.xxx.x.xx.:...x.xx..:..:x.x...:xx::.:.:x.....---------x:.::::.:x..::.x:..:x:...x...--.x.x.xx.x::....x..:.xx....xx.::..-..:::.x.:.:..--..xx...-----.::...---:..x:.::...:.x:x:x.:.:.x:.::x...::.-..:xx.:..::..:.x..:..---.:.x...x.x------..xx....:....:...xxx..:::.x.......-..:........x..:....x..:....x:...........:................:.x:... 31M3D31M5I6M1I99M3D38M1I27M3I47M9D29M2I33M1D13M2I7M5I6M3I35M1I21M3I10M6D34M1D64M 328/531 61.8% 557/94230402 0.0% 49/531 9.2% 33278437 NA +15227 chr4 + 190214555 79947410 79947409 79947763 354 ATTTTAAGTGCTACAAAGATGAAACAGCAAGACA-----AACTCATAGTGTTAAAA--------AAAAAGTTTTTTATTTTGCCCCAGCAGAACATTTTCTGACCTATAGCCTCCAATCACCCTTTACTGTGG-GTGATGTCAAAAACACTTACTGCACAAGCAGAGACCTGTGTTTCCTTTGCCACAGACAATAAATCTTTAGTGTCTTCTCCTGATACGCATCACTCCACTTGCTCTCAAGAGGCACTATACATCTCTCTTGCCTTTCCCCTC-ACTAACAAGGTCACTTTTGAGTGATAACACAACTTATTGCAAAAATGTATAGACATGCACAATAATTAGTATCCACTTTTAAGTACCTTGTCA chr4 + 94230402 46669170 46669169 46669530 46669170 46669169 46669530 361 ATTCTCAGGACCAACAAAGCTAAACAGCCAAGCAGTCACACCTCTTCATATAAACAGCCCTGTGAAAATGTCTATTATTTC-CTTCAGTGAAACATTTT-TAACCTACAGTATGTAGTCATTCTTTATAGTTGCATGATGTCAAAAACATTTATTGCACAAGCAGAGATCTGTGTTACTTTTGCCACAGACAATAAATCTTTAGTGTCTTCTCTTGATACGCATCACTCCACTTGATCTCATGAGGCACTCTATGTCTCTCTTTCCCTCTCACTCTTCTAGCAAGGTCACTTTCCAGAGATGAAACAACT--TTTCCAGAAGGTAAAG---TGTTCAATAATTAATATCTGCTGAT-AGTACCTTCCCA ...:.x..x:.:.xx..:::x.......x.::..-----.x...x.x:.:.x..x.--------....x..:.x......:-.::...:::........-.:.....:..:x.x:.:...::.....:x..x.-:..............:...:..............:.......x.:..................................:.....................x.....x........x..::........x..:.::.x...-x...:............:x..x...:.x......--..x.x.:..x...x..---..:x.........:....::..xx.-........x:.. 34M5I17M8I17M1D17M1D33M1I141M1I34M2D16M3D25M1D12M 266/346 76.9% 361/94230402 0.0% 23/346 6.6% 33278240 NA +9631 chr4 + 190214555 79949186 79949185 79949527 342 GTACCCACAAACAGGATGAGA-ACACAGAAATAACATGGGTTTGGCACATTATGACATGATGCTTACATGTTTGGGATGACTAAGAGT----TATCTGTTAAATAGAGGGTGACAGGTAGTAATTATTCCAATGCAAGACATTGAACACTAAACAAGGATGGCTAGGATAAAGTGTCAAATGCAGGTCATTAATGATGACAAGGACTGGATTCAGCTGCAGCAGCTGTCACTGTCCCAGGTGGG-TGACC-ATACTGTCATAATCCTTATCGCTATGGTCTTCCTGGAAA-----AGTACAGG-CTAATATGGCAGGTTA---AAAAAGTACAAATGATAAGTATTGCTTACAGAAAT chr4 + 94230402 46671594 46671593 46671944 46671594 46671593 46671944 351 GTACACACACAGAAGCCCAGACACAGAGAGTCAACATTAGTTGAGCATCTAGTCAAATG----TCCCTTGTTTGTCGAGGCTAAGAGGAGTGTGTGTGTGAAACAGAGGATGACAGGCTGTAATTATTCCAATGTAGTGC-TTGTACACTGAAGGAAGGTGGCTGGGAGGAGGTGTCAACTGCAGGTCATTAAGGCTGACAAGGGCTGCAGTCAGCTCTAGCAGCTGGCCCTCTCCCAAGTGGGCTGACCAATGGTGCCATCA-CCTTGTCTCCAAGG-AGCCTTGGAGGCACGTGGCGTAGGCCTCATAGAGTGAGTAAAGGAGAGAGGAATAATGCTAATTGTTGTTCAGAGCAAT ....x....x.x.:.x:x...-...x...:x:.....x:...x:...:x.x:.x.x...----.:x.x......xx:x.:.......x----.:.x...x...:.....:.......:x...............:.:x:.-...x.....:..x:.:.:.....:...x:.:.......x.............x.x........:...x.x......x:........x.x..x.....:.....-.....-..:x..:...x.-....:..x.:.x..-xx:.:....::-----:.:::...-..x...x:.:::..x.---.:.:..x.xx....x...x.:...:.:.x..x... 21M1I37M4D25M4I48M1D103M1I5M1I12M1D14M1D11M5I8M1I16M3I35M 235/335 70.1% 351/94230402 0.0% 23/335 6.9% 33277592 NA +3103 chr4 + 190214555 79951555 79951554 79951624 70 GACAGAGAGAGACTCTATCTCAAAAAACAACAACAACAAAAAAAAAAAAACAACAAAAAGAACAACCAAA chr4 + 94230402 74675428 74675427 74675491 74675428 74675427 74675491 64 gaaaaagaaaaaCCC-----AAACAAACAACAACATCAAAACAAAACAAACAATAAAAAGAA-AACCAAA ..x.:...:.:..:.-----x..x...........x.....x....x......:........-....... 15M5D42M1D7M 53/64 82.8% 64/94230402 0.0% 6/64 9.4% 5276127 NA +11047 chr4 + 190214555 79954784 79954783 79955112 329 CAGAGGCCAGAGGTCAGAGGCTAGACAAGTGTTATTTGTCATCTAGTTAGCTGCAGGTAAAAAGACCACTTAATAAAATGAGTCTATTAGGCTGATTTAAGTAAAAGTGATTGATTTTCATTTAACATTTGTCCATTATTGTTAGGTCAAGTTGGAAAATCAATTTCAATGTGACCCAATGGGAGAACAGTTCCA-GTATCTATATGTGTTTAATGACAAGAA--CACATTAGT-ACTCATTTGCTTATAACAGTATTAAATGAT----AGCTTGTGTTTAAATTATTTTACAGTTGTGACACAAGACAGCAAAATACAGCATA-TCAAAATGACAAT chr4 + 94230402 46677850 46677849 46678180 46677850 46677849 46678180 331 CAGAGGGTATAGGTCAGTGA------AACTGTTACTTATCATCTGGTTAGCTGTCCG-ACAGAGGCTGCTTAAGAAAGACAGTGAGCTTAGCTCATTTAAATTGAAGTGATTGATTTTCATTTAGCGTTTGTCCACCATGGTTATCAGAAGTTGCAAAATTCATTTCAGAGCGACTTAAAAGGAACAGAATCGTATGTATCCATATATATTTAGTGACACGAAGCAGCATTAATAACTCCACTGCTCATAATTGAATTAATTTTTTTTAAAACTGCATTTAAATTACATGAAGGCTGTGACACAAGCCATCAAAAAGCAGCACATTCAATATTAAAAT ......x:.x.......x.:------..x.....:..:......:........:xx.-.x.:..:.::.....x...:xx...xx::.x:...x......:.x:....................:.:........::..x....xxxx......x.....:x......:x.:...::..x:...:x.x.:.:x:.-.....:....:.:....:.....x...--x:.....:.-....xx:....:....:x.x.....x.xx.----.:x:..::.........:x.x.x:.:...........x..x.....x:.....:.-....x..x.x... 20M6D31M1D137M1I27M2I9M1I30M4I55M1I13M 228/322 70.8% 331/94230402 0.0% 16/322 5.0% 33276934 NA +23468 chr4 + 190214555 79958381 79958380 79958889 509 TCATAAAAGAGTATCTGATGCCAGAGCATGAAAAGTGTATTAAGAGCTTAACATCAGTATTAATAACTCAGATTTAAAACTCTTAGCAATTAATTAAGATTAATGACAGAAGTCATCCCTTTTTCTCCAATGTAACACTTCCTCACATCTTTTCAATCTCTCATTCATGAGCCCCTCCATGCTCATTTCAGGCTGTGAAAAACGAAGGTCCTGAAACTTTGATCCTGTTATCTGCTGCTTTTTGTATCTGA----------GATTAAGGAAGTAGACACTGGCAAATTTACAACCAACAGCTCGGACAGCTGTCCTACTTTAAGCAGTTAATGGAAAAGGAACTAATCTAGTTAAGAGCATAAGACTAGTTCATAAATCTGGATTCGGAGGACAGTTAAAACCGTCCCACCTCTTCTGAAGAGTAGTAACTGAATTAA-------ATTCTCTTCTCACTGTTTGTTGAGAAGAGCCAGTGTTTCTGTAAACTGGACTAATGAGGCACTCAGAGCTAACATAAGCCA chr4 + 94230402 46681108 46681107 46681582 46681108 46681107 46681582 475 TCCCAAAAGAGCATCTGATGTTGATGTGTAGACAGTATGTTAAGGATCT----TCCTAATTAATAACCCAGATTAAAACCTCTTGGCAATCAATTAAGATTAATGACAGAAGTCA------------------------------------------CTCTCTATC-----CCCCTGCGCCCGCATATCAGGCTGTGAAAACCCTGGGTCGTGAAACTTTAATCCTGTTATCTGCTGCCTTCTCCATCTGAAAAGCCTACAGATTAACAGAGCAGACATTATCGAATTTACAACCAGCCGCTCGGACAGCTGCCCTACTTTCAGCAGTTAATGGAAAAGGAACTAATCTGGTTAAGAGCATGGGACTAGTTCATAAATCTGGGTGCACAAGACAGTTAAAGCTGCCACGTCTCTTCTGGATGGCAATGACTGAATTAACCTGTCGGCTTTCTTCCCACTGCTTCTTGAAGGCGGTCAGTCTTTCTGTAAGCTGCACTAACGAGACACTCGACATTCACATAAACTA ..x:.......:........::::x.::.::.x...:.:.....::::.----..xxx.........:......x...x.....:.....:........................------------------------------------------.....xx..-----.....x.::x.x...x..............x.xx:....x.........:.................:..:.x:......----------......x::..:.....:.:x.:............:.x.............:........x...........................:...........::...................:.x.:x.:..........:.:.:.x.::........:.x:.:.:.:..........-------::.:.....:.....:..x....:::x:.:....x.........:...x.....:...:.....::x::.x......:.:. 49M4D62M42D9M5D80M10I177M7I81M 356/458 77.7% 475/94230402 0.0% 68/458 14.8% 33277273 NA +42028 chr4 + 190214555 79964208 79964207 79965271 1064 AAGCTCCTTGGAGATTTAATTGGTTTGTGGAACTACTCCAAAACTAGTGCTGCGCTTTCTTCTTTCTTTGCCTTTCTGCTTCTCTAACTCTCTCTTTTCAAATCAAAAAGGA-----------------GAACGCATGGTAATGCATCATTTATAAATTACCTTGTTACTGCGAAAAACAAAACACTGCTTTGAAAACCAAACAAACTCCTGCTGCGGACTCCGGCATGTTTGATGGAGGCCTTTCAAAAGAGTCCACGGCTTAATGGAGGTTGTTTATGTGGAGACTTCGATCTGTACCTGCTGTCCCCTGTCACTCCCTGGAAACTTGGCGGCAGATGTTGCAGCGTTAAGTTGTCTCTGAAGTGGCTTTCTGTCCTCGTCTCCCCACCGCAACGGAGTCAAACTACATTAGATCTC-TTATTTGTGCCTAAGGCAAGTTTGGGAGCGCAGCTGTGTCCACCCCGACTCCTACCTTTGGTGTTTCAGGCCTCCAGGCAGCGAGAGTGAGACCAAAACGGTTTTGCCGCTCTCAACTACCTCCGCTGACAATCCGGCCG-CTAGCTGCGGGATGGGGAGGCCGCTGCCGCCGCTGCAAACAGATGTCAGCGACAACCTGCTAGCTTACACCTGGACGCGCGGCCCTCACCTCGCGCGCCGC--GCTGAAACATTCATGTCTCGGAGGACTTCCCGCCGCAATCAAAGCCCGGGCC---------CGGCGTGCGGCCCGCGGACCCCGCCA-CCTCTGCGGAAGCTGGC-GCGCGGAAGAGAGCGCGAGAGAGGGCCCGAGCGGGAGACTGCTCGC-CCGCTTTGATACTTTCTGCCTGAACTTCAATTACTTGATCAAGGACTTCAATTCAGCAGTGAATTCTTCCACAAACGTGCCCGGTGCGGCCTCCGAGCCATAAGAG-----CCATAAAAGGGGCGCATTTGGCTGGAAATTCACCGTGACGGGACTCACAGAGTAAATGCGCGTGACTCTGGGTTGAGTTCTAGGAACGCTGATTTGTTTATACAACTAAACTTGAGTTTCAAGCGGCA-------GAATCTGCAGTAAAC-AATTATAAATAAATGACAAGA------TTGTTTTCCT chr4 + 94230402 46683898 46683897 46684962 46683898 46683897 46684962 1065 AAAACCCTTGGTCAGTTAAGTGGTTTAACAAGCTACCCTAGAACTA---CAGCGATTCCTTATT-CTTTACC---------------------CCTTACATAAAGAAAAGAAAGCATAAATATGAGTAGGAACATGGGGTAATGAATCATTTATAAATTATCTTGTTAGCAAAGAAAACAAAACACTGCTTTGAAAACAAAACAATCTCCTGCCGCAGACTCTACTATGTTTGATGGGAGCCCTTCAAAAGA-TCCATGGCTTAATGGAGGCTGTTTGTGTGGGGACTTCGATCCGTACCTGCTGTCCCCTGTCACTCCCGGGGAACTCGGCGGCAGATGTTGCAGCGCTAAGTTGTCTCTGAAGTGGCTCTCCGTCCTCATCTCCCCACCACAACAGAGTCAAACTATATTAGATCTCTTTATTTGTGCCCGAGGCATGTTTGGGAGCGCAGCTGTGTCCACCCCCAAT-CTACCTTTAGTGTTTCA-GCCCCCAGGCGGCAAATGGGAGACCAAAACTGTTCTGCCACTCTCAACTACATCTGCTGACAATCCAGCCGCCTCGCTGCAG------------GCTGCCGAGGACCCGTGCAGATGTCACCGACAACCTGCTAGCTCACACCTGTACTGGCATCCCCAGCCTCAC-CATTGCTGGCTGAAAAATGGATGGCTCCAAGGACTGCCGTCCGCAATCAAAGC----GCCTTCACTCAGCTGCATGCAGCCT-CTGACCAGGCCACCCTCGGCATTAGCTGGCAACATGGAAGAG-GTGGGAGAGGGGAGAGGAGGAAGAAAA-GCTCTCGCTGCTTTGATACTTCATGCTTAAATTTCAATTACTTGATCAAGGAACTGAATTCAGCAGTGAATTCTTCTGCAAATGGGAACTACCACATTCCTAGGCAGTAAAAGGAAGAGAATAAAAGCGCTGC--TTGGCT-GCTGTTTGCCATAACAATGTTTCCCAGGTAAGTGCATGCACATATGTATTTCACCGTACACACTTGGGGCTGCTCATCAAACTGACTTCAGCCTACCAGGGGAACAGCATGGGATCTGCACCCAGTAAATCATGAACAAAGGAGGAGGTGTATTTTTTTTTCCT ..:x:......xx.x....x......:xx:.:....:.:.:.....---.x...x..:...x..-....:..---------------------.:..x..x.xx:.....:.-----------------....:::x.......x...............:.......x::x::........................x......x.......:..:.....::x:...........::...:.........-....:.............:.....:.....:..........:.........................x..:....:...................:.....................:..:......:..........:....:...........:..........-...........::.....x...........................x.x.-........:........-...:......:..:.:x.x...........x...:....:...........x..:...........:....-..x.....:.------------.......xx.x:x.:x:.........x................:.......x..xx..:x...:x:....:.-.:::..--.......x..xx...x...x:......x..xx.............----...---------.x..:...:...:-.x....xx....-....x..:xx.......-:.::.......-.:.x.....:..:xxx...x::..:.x-....x.-.:............:x...:.:..:....................x:.x....................::....:.x.xx.x::xxx::::.:::..x:...:..-----xx.......x.x:..--......-.xx:..::..:.:..::x::.:x.x::....:...::.::xx.x..x:..xx:::x..x:x..x:x.:x:..:.:..xx....:.x:.:::x:.x.x..x..x.-------.:.......x:x.::-...:..:..:...x..x:..:------..x....... 46M3D15M1D7M21D19M17I123M1D166M1I50M1D17M1D71M1I10M12D72M1D6M2I45M4D3M9I13M1D12M1I17M1I11M1D27M1D6M1I106M5I15M2D6M1D104M7I15M1I21M6I10M 762/1013 75.2% 1065/94230402 0.0% 103/1013 10.2% 33280310 NA +11895 chr4 + 190214555 79977598 79977597 79978212 615 TCAATACATTCCCA-TATACAAACCTCATCTCCTTCCTGAGGTCGCATCAAAGAAACCCGGTCATACTGCCGCCTCAACAAAGCCCAGAGAGCATCAAGACGACCCTAAGGGAAAATGAGATTTGTGAATTCCCAGAGAATGTACTCAATCTCTATGTACTGAATAAATGAAGACATAAAACGAAGAAAGTAAAATCTTCTTTACCCTCATTTCTTTCATAAGGTAAACTAATAAGTAATAAAAACCTAGAGGTTCTTATTGCCAAGAAAGTATTCAGCTGTTAAGAGTGTACAATGAATATCTGCAATTTCATCTACCCTCTTTCAAGTAGCTGGGGGGATGTGGTACAAAAAAAGTTACAATGTCTCCAGAAGTTTTGAGTTAAATTACACAAAATCTGGACACATACCTTAATTGGGGTGTACCATTTTGTCTGAGGAGGCTGGTG-TGTGGGTTTGGGTCGAGGTGGTCTAGGCCTGATGGGTTCCTCTGTTTCTTCAGGAATCTTCACCACAGCATTTTTGGCTTTCTCTAGCCTTGCACCTTCCTCAGTAGATCCTTTATCACCCCAACGAACCTGTAAAACAAAGGGAGAGTACTGTTATCAGACATAAA chr4 + 94230402 46686603 46686602 46687071 46686603 46686602 46687071 469 TTGATACATTCGCGCTGCACAAACCTCATCTCCTTGTTGTGGTCGCATCAAAGAGACTCTGTCGTACTGTCTTCGTAACAGCGCCCACAGTGCATCAAGTCGACCCTGTGGCAACAGAGGA-------------ACAGGA----------CTCTGAGTATG--------------ATAAAACCAACCAAAT---------------CTCATTTATTTCA---GTCATACTTGGAAGCAGTGCACA---------------------------GTTCAGCTGTGTAAGACGAGTAAGGCACA----CAAAGTC--CTACCTT----------------------TAGTACAAAA----CTACACTGTAATGAAGACTAAAGAGCT-----------------------TACCTTAATTGGTGTATACCACTTCTCCTGAAT-GACTGGTGAGGTAGGCTTTGGTTTAGGTGGTTTCGGATGAAAAGGTTCTTCTGGTTCTTCTGGGAGTTTCACCACAGCATTTTTTGCTTTTTCTAATCGAGCCCCTTCTTCAGTGGATCCTTTGTCACCCCAGCGAACCT---AAATAAAGCCAGAGT-------TTAGATGTAAA .::........x.:-.::.................x:..x..............:..:.x...:.....:.x:.x:....:x.....x..x........x.......:x..x..x.x::..-------------.x..:.----------....:x...:x--------------.......x..xx..:.---------------.......x.....---.x:.x...x:x...:.:.:x.x.---------------------------:.........xx.::::.x::..x.x.:.----...xx..--.....:.----------------------.:........----:....x...xx:x.::.x.xxx...:.-----------------------............x..:.....:..:x:....:x-.:......-x..:..:..x...:x.......:.x..x:x:.x:.....:....x......x..:.x:.................x.....:....::.xx..x.....:.....:........:........:.......---...:....xx.....-------.:...::.... 14M1I106M13D6M10D11M14D16M15D13M3D23M27D29M4D7M2D7M22D10M4D27M23D33M1D8M1I131M3D15M7D11M 339/467 72.6% 469/94230402 0.0% 150/467 32.1% 33290995 NA +11056 chr4 + 190214555 79979513 79979512 79979774 262 GGCTTACTTAGATGTTTTTACCTTTTTTTA-----------------CTACAATTTTAGAATGGGCTTTCAATTTCAAGTGGGCCCTGTTGAGTCATTAAAATGTATCTATATCTTTCAGTGTGATCAATGATACTAGAATG----TTTTTATGAGGTTGTTAAAAT-TGTTTTAAACACCACTAAA--CCTTTAGAGCTAGATAGTTGGCTTTCTTTCCAGAGAAATGACCTTCTCTTTCCAATCACAGTGTCATCACCTGGATAAACTAACACTTATAAAATCT chr4 + 94230402 46688763 46688762 46689043 46688763 46688762 46689043 281 GGCTTGCTTAG----TGATACCCTTTTTTCACAGGGGAGTCCTGTCTCTACAATATTACAATGGGCTTTCATGTCCAAGTAGACCCTGCTGAGTCATTAAAATGCATCTGTATCTTTCGCTGTGATCAATGGTACTTTTACGGTGTTTTTTATGAGGTTGTTAAAATGTATTTTAAACACTGTTAAAGCCATTTAGAGATACATGG-TAGATTCCTTACTGATAGAATGACCTTCTCCTTCAGATTTAAATGGCTTCACCAGAAGAAACCAGAATTCGTAGATTCT .....:.....----.xx....:......x-----------------.......x...x............xx.:.....:.:.....:...............:....:........:x...........:....xxx.:.----.....................-.:..........:::....--.x.......x..x..:.-.:.x..:...x.:::x::............:...x:..:xx.:..x.x.....x.:.x....:.:x.:.::..:.x... 11M4D15M17I95M4I21M1I19M2I17M1D79M 197/257 76.7% 281/94230402 0.0% 29/257 11.3% 33290750 NA +7715 chr4 + 190214555 79983805 79983804 79984012 208 GTTTCTATGGCTTAATAGCCCTAGAAATAC-ATACTCCAG---ATTAGCAGCTTC-TATTTTTTTTTAAGATACCAACCTCCATTCTTTTAATTCCTCCAACCCCTCGACCACCATAATAGGAAGCATCCACAGTTGGCCACTTTTTAGTAGGCAAAGGTTC---TTCTTCCTCCTGT------------GGAAATATGTTTT--ATAAATAGTTTTTAATTAATTTCTT chr4 + 94230402 46690857 46690856 46691075 46690857 46690856 46691075 219 GTTTCCACCACTTG-CAGCCTCAGAGACCTTGTATTTCAGTAAATTATCATCTTCATATT----------GTACAAACCTCCATCCTTTTAATTCCTCCAACTCCTCGTCCACCATAGTAGGAAGCATCCACTGTGGGCCATTTCTTGGTAGGTAAGGGTTCTTGTTCTTCTTCCTGTCAATAAATTGAAAGACATTTGCTTTTAAAAGAtatttatttatttatttatt .....:.:x:...:-:....::...:.:x:-:..:.:...---....x..x....-....----------:...x.........:.................:.....x........:..............x..x.....:..:..:.....:..:.....---......:......------------:..x..x..:...--.x.:...x..x..x...x....x.. 14M1D15M1I9M3I12M1I4M10D92M3I13M12I13M2I25M 155/197 78.7% 219/94230402 0.0% 33/197 16.8% 33292948 NA +19569 chr4 + 190214555 79996764 79996763 79997273 510 AGTGCAAGAATACACATTCATTT----CAGAAAAGAATGTATTCATATGCACCATATTTTATGAGAATTTGCAGATTTTAAAAGGCATAATATTGCCTAGTTGCCAGAATTTTTTCCACTTAGCATCCTTCAGCTCTG-----TATTGAAGATTCTGGAAAACACTTTCACCACTTTATGAACCATATGCAGAGTTTGATTCTTCTCCAATTTTTTTTTCATTTGTT-----ATTATCATCATCAGGAAGGATTACATCTCATCTACTTAGCTGCTA-GAATGAAGATTTCAGTTTGGAAGAGAGCCGATTTCTTT-------AAAAAAAAAAAAGTTAGCTGCTTCAGGCAACAGTCCTTTTGATCTGCTCATTAACACTTTTCAAATGTTCAAGTGATATGGGCATTCTTTGCGCTAAAAAATGTCAGCACTGGAGCCTGCAGCCAGCTTGATGCAATCATATGTTCCAATATTCAGAAAAGAGTGAAAAGAACTGTCAACATTGAATTGCCTTGGATTAAAAAAAAAAG chr4 + 94230402 46694527 46694526 46695019 46694527 46694526 46695019 493 AATGCAAAGA-ACCCATGCAGTTTTGGCAGAAAACAGTG----CAAATGTAGCAT---------GAAGCTGAAGTTATTGAGTATCATAATATTGCTAAATTCAC--------TTTCCCTGATCTTGATTCAGATTGGATAAGTAACGAAGACTCTGGATAAGGTT---GCTGTCTTGTTACCCACATGTAGAGATGGATTACTTCCTAATTCTGTTTTGTTTTGTTTTATCGTCATTGTCACCAGGCAAGTCTGCATCTCTTTTATTTAGTTGCAAAGAAGGAAGACTTGAGCTTGGAGGAAAGCCGATTTCTTCCAAAAAAAAAAAAAAAAAAGTTAGTTGCTTCAGGCAACAGTCCCTTTGATCTGCTCATTAACACTTATCAAATGTTCGCGTGATGTGGGCAT---------TAGGAAATGTCAGCACCAGAGCCTGAAGCCAGCTTGATGTGATCATATGTTCTGATATTGAGGGAAGAGTG-AAAGAACTGTCAACAGTGAACTGCCT----TTAAAAGAAGGGG .:.....::.-..x...x..x..----.......x.:..----..x...:.x...---------...x:..x..x.x..:.:x:x...........:x.:..xx.--------..:.x..x.x.x.xx.....x.:x.-----..x:.....:......x..x::.---:.::::..:.x.x...:...:....x.x....x:.::.:....:.x....xx......-----:.:..::...:....x.:.x:.:......x.:..:....:...x.-...x.....:..x..:.....:..:............:-------.................:..................:......................x..........:x.....:.......---------..::............::.......x.............::...........::.....x..::.......-...............x....:.....----......:..:::. 10M1D12M4I12M4D12M9D41M8D25M5I23M3D58M5I45M1I38M7I85M9D71M1D26M4D13M 361/471 76.6% 493/94230402 0.0% 61/471 13.0% 33302237 NA +3231 chr4 + 190214555 80014438 80014437 80014494 57 CACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCATGAGAATTGCTTGAACCCGGGA chr4 + 94230402 76033207 76033206 76033263 76033207 76033206 76033263 57 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...x....:.:...........::.:......x.x..x...x::.........:.:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 3981231 NA +3659 chr4 + 190214555 80021009 80021008 80021091 83 CATGGTGGCACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--....:.:...........::........x.:x.x...x...........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 3987812 NA +23333 chr4 + 190214555 80025207 80025206 80025636 430 ATACACAATTTAGTAAA--TAAAACTCACTAAGTCCTAATAGTCACA----TACTTCTATTTAATGTCTAAAGATGCATGACTCTTCCAAAACAGGAGAATGGCTCAGTGCCATATGTCATAGCTATTCTGATCTAAGAAATGTTATACTCCATGAATTATGATTGACATTTCAATCCACAGTAACATATTTGCAAAGTATTCATTTGCTTCTGACTTTATATATATCCAATAAAAGATTGTCATTTTATGATCCATTAAAAAGGATGAAAAAA--TTAAATAAAATTGTGAAAGACATTTGCTGGAAGTAATAAATAATTTACCTTCAATTTGCACATACTGAAAATTAAACTGGCAGCTACTCAAAAAGTTATTACAATTATGGTGACTTAAGATATTTTGAAATCAAGTGATACTATTTAATGTTCTGCAGTGCT chr4 + 94230402 46704149 46704148 46704586 46704149 46704148 46704586 438 ATCCACAATTTAGCAAAAATGTAACTTCAGAAGCCCCAATAATTGCAATTCTTTCTTTCCTTTATGTGCACGGCTGTCTTATTGTTACAAAAGAGGAACATGGCCCATTGCCATATGTCACTCCAGCTCTGGTCTGCAGACTTTCAAACCCTATGAAATACAACTGACATTTCAATACACAGTCACCTATTTGCAAAGTATTCATTTGCTCCTTACTTTATGAGCATCCAATAAAAGGCTGCCATTTTATGACCCATTAAAAAAGATGAAAAAAAGTTAAATAAAATTGTGAAAGACGTTTGCTGGAAGTAATAAATAATTTACCTCCAATTTTCACGCACTGAAAATTAAACTGGCAACTGCTCAAAAAGTTATTAAAATTATGGTGACTAAAGGTATTTTAGAATCAAGTGGCAGCATTAAAATAGCTAGAATGCT ..x..........:...--.:x....:xxx...:..:....:.::..----.x::.:.x:..x....x:.x:.x..:x.x.:.x..x.....x....:x.....:..x............:xx.x::....:...:x::.x.x.:.x..:.:.....x..::.:............x......x..x.......................:..x.......:x::............::..:..........:..........:..........--.....................:............................:......x...::...................:..:...............x.............x...:......::.........::.x:...x..xxxx..:x.:.... 17M2I28M4I223M2I162M 335/430 77.9% 438/94230402 0.0% 8/430 1.9% 33321058 NA +38390 chr4 + 190214555 80027532 80027531 80028830 1299 CTTTTAAGAGAACT---AATACT--ATCAGTTTCATCTGATTTAGATATTTATTTCATATTTGCCAGAAGATTCTGGCCAATGTTTTTGAAAGCACATTTAACTATACCATATGCCTCCTTAAATCATCTCTATCAAAAAAACTGTAGGATAAGACTCCGGTTCATTCTGTTCTGTTTTTCTTTC-TTCACAATGTGTTTATGTATATTTACCCAATTTGCTCTGTTCTTCTTGCCAAATTACAGGTTTGAGATCTCAACTATTGCAGAACAGCTGTGCTATTGTTGATGTCTCACAAAACAAGGGTCATAGAATAAGCCCACGTTGCAAATACTTGTAATACTTGCACATTAA--ACTGTGAGGCTAGTGCCCTGGATTAGGGAACATCCAAAGAACATCAGA-----GAATGCATCCTATTCAAACTTAAAGAAGACAATTTGGCACAAAGGAACC--ACTTTTAGAAATAAATTTCTAAATAATAGGCAGATT--TTTCTTGGTAAA-ACAGTTTGTTTAATCATACACC---------------------------------ATTTTAAAAGTAAACCGTGTTCATCCAAAAAAATAGAAAACAACCTCACTACTATGAC------CATTCTTTCTG---------TTTAAATA---ATAAGAGTTT--GTTCATCTTAGCCTAAAAATCTATA--TCAAATAAAGAAATTTAATAAATACAGATCTCTGTATCAGACAGATCTATCAAAAAAAGTTATTGAAAGACCCATCTGAACAATGCTCAAAA---TGATATACCTGGACAGGATTTGCCCAGATAACTTTAACTTTCCTTTACTCCATAACATCAA---------------ATTCCAAATGACGACCTATGTCCTAGCTACTCGGCTACATTCTTACTCCCCCATCTCCCACATGCTCTTTTAAACCAAAATCCACAGGCCTTAAGTT-TTTAAAAGAATAATCCTCAAA-CAAAGTGAAA--TTCATGAAATAACATAAAGATAAGAAAAG-AACGGATAGAGCAGGCTAATGAGATGAGGCACATGCCCATGGATGCAGCTCTGAGACTGTGCATCTGGCTTTGAGGCTCTCTGTCTAGGGTTACTTCACCAGCATGTTGTTAATTATTTAAGTGAGAGAATGAGGGGAACTATCACCACATCTGTCACCCTCACACAGGAAAAACCTTCATTCATTGTTGGGCCAGATGTGTTTATCTGAAACATAGACTAACTAGCTACTTAATGGGTTTGAATCCTTAGCCAAAAGCTAATTAGGCAAACATATTAAGCATCAGTCACCTTACAAGGCTAAACTGTTTCAATTGTGTTGATTTCAATCCAATCTCATAAGAGAGCTCATCACCTACAAAA chr4 + 94230402 46708977 46708976 46710277 46708977 46708976 46710277 1301 CCTTTGAGAGAACTCATGATACTGTATTAGCTCTTTC-AATTTAGATATTTATTTCATATTTGCTTGAAGAATCAGGCCAATGTTTTTGAAAGCACATTAAACTATACCATATGCCTCCTTAAATCATCCTTATCAAACAAGTTGTAGGATGATGCTCTGGTTCACTCTGTTCTGTTTTCCCTTCCTTCACAATGTGTTTATGTATATTTATCCAATTTGTTCTGTTCTTCCTGCCAAATTGCAGGTTTGAGATCTCAGCTATGCAGGGGCAGCTGTGCTATTGTTGCTGCCTTACAAAACAAAGGTCACAGGCTGAGCCTGTAGCACTAGAACTAATGACAGATGCATGTCACCCATTATGGGACAAACAC---AGAATCATGAGGGTTCAAGGACCCTCTGAAGTAGGAATAAATCTTACCTTGCCTT------------TTGGGAAGCACGAACTCAAGTTTTAAGAATTAACTT-------ATGTGCAAGTTAGCCTTTTGCCAAATACAGTGCTGTTAATGACATTCTTCCCCCCTCAGGGGGAGGAGGGGGTGGGGGCGAGGTTTAACACCCCCCCACACACACAAAAAAAAGTCTGAAACAAAATCTCAGCTGAGTTGAGAGGCATGATGCCTGCATGATACTTTTGAATACTGGTAAGAATTTCCAGCTGCCCCAGTCCAGGGAGTTATGGGCCACACAAAGAAGTGGACTGCCACAAGATGTTT------------CCTTCCAAAGAAGGTTGTTTCCAAACCCAGCCTAGCAA--CTCCAAGCCCTGAAACACCAGGGCGGGACT-GTTCAAATG---------CTCTTTGTTTGTAAGAGATCAATCTGTAGGGCTGGTGAATTCAAAT--CTATTTGTTCCTTGGGTGGCCGGA-GCATTATTTCTTCTCC-TCTGCC--------TTTCAGAACAGAAGCCAGTAGTCCAAAGTTATTTAAAGGGATGTTTCTTAGAGCTATGCTTAGCTTTCA-----------AAGAATAGGGAATGCGATAGATGGAGCAGACTAATGAGATGAGGCACATGTCCATAGATCCAGCTCTGAGACCATGCAGCTGGCTTTGGGGCTGTCTGTCTAATGCAACTTCACCAGTGTGT-GTTAATTATTTAAAGGGGAGCACTGGGGAAACTACTGTCACATCTGTCACCCACACACAGGCAGAACCTCCAGTCAGTGCAGGACCAGATGTGTTTATTTGAAACAAATACTAGCTAGCTACTTAATGGGATAGAATTATTAGCCAGAAGTTAATTAGGCAAATATATTAAACATCAGTCATCCTACACAGC-----------------------ATCACTTTAACTTCTTTAGAGCCATTATCAGCTACAGAA .:...:........---:.....--..:..:.::x..-:.........................:x.....x..x........................x.............................::.......x..::........:.x:...:......:.............:.:...-.........................:........:..........:.........:................:....xxx:.::.................x..:..:.........:.....:..:x.:....::::x::.x.:x...x:.:.:.xx....::.:.x--.:.:..:.:.x.:::.---:..x.x:x..:x:.:...:..x.x..x..-----....:x...:..:::x:x...------------....x.x:x.x....:--.x.....::...x..:..-------..:x...::..--::.:...x:...-.....x:xx.....x.:.:x.:---------------------------------:x.....x.x:xxx..::::x..:xx......:.xx:......xx..x.x:..:x.x:------...xx.x:...---------...:....---:.....:...--:x::::.::..:.:.:::.x:...:--:..x.:......:.xx.x.:xxxxx....x.:.------------:..x:....:..:...:..xxx.:.....x.:x.:...--...x..:---...x.:...x..:.:...:.-.::..:..:---------:..:..xx:.x:.x:.x.....---------------.x.:.....--.x.::.:.x:.:.:.x.:x:...x-:....x..x..:.:..-...x..--------...:.:.x..:..x...xx:.:.:x.....-......:.:..:x.:..:.:.-.x.x.:xx.:--....-----------..::...:.:..x.-:.::...:......:....................:....:...x............::....x.........:....x........:x.:x..........::...-.............:x.:...x.:x:...:.....::::..............x........x.:.....:..x...x..:x..:..............:.......x.x....:................x.x....:x.......:...:............:.......:.........:.:....x:..-----------------------x...x.::..::..x.x....xxx.:....x.....:.. 14M3I6M2I12M1D147M1I168M2I16M3D29M5I21M12D16M2I18M7D11M2I12M1I22M33I58M6I11M9I8M3I10M2I25M2I33M12D38M2D7M3I20M1D9M9D22M15I9M2D24M1D16M1D6M8D30M1I21M1I10M2I4M11D14M1I107M1D192M23D39M 858/1205 71.2% 1301/94230402 0.0% 190/1205 15.8% 33318555 NA +3811 chr4 + 190214555 80031611 80031610 80031704 94 TTAAGTACTTACTCTCCAGCTTTATTCAGGATAGGTGCAGGACAAAGCATAGAATTAAGCTGTACACTTACTGGTTTTACACCTAGAAAATAAA chr4 + 94230402 46716308 46716307 46716401 46716308 46716307 46716401 94 TCAAGTACTCACTGGCCACTTCTGTACAGGATTGGTGCGGGGCAAAGCAGAAACTCCGATTCCACCTTTTTTGGTTTTTCATCTGCAAAACAAA .:.......:...xx...x:.:.:.x......x.....:..:.......x.:.x.:x:::.x:..x:..x:.......x..:..:x....:... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 33315303 NA +4155 chr4 + 190214555 80035958 80035957 80036057 100 TTCTAAACACTTACCCCCCACACAGACACTTGAGGGCTGCAATTCTAGGATTTCAGTACATGACTGAGCTAGTATCT-----AAAAAAGAAAAAAAAAAAAGATT chr4 + 94230402 46721319 46721318 46721423 46721319 46721318 46721423 105 TTTTGAGAACTTACCTCCCACACAGACACTGGATGGTTCCAAATATAAAATCTCAGTGCATGACTGCTTCAACACCTGTTGCAAAAGAGGAAACAGTAGTAGGTT ..:.:.:x.......:..............x..x..:.x...x.x..::..:.....:........xx::.::.:..-----....:..:...x.:x.:x..:.. 77M5I23M 70/100 70.0% 105/94230402 0.0% 5/100 5.0% 33314639 NA +6811 chr4 + 190214555 80054265 80054264 80054363 99 TACTCACAGAATTAATTATTCCTTTAAGAGCCTGAAATCCACCTTTGACAGGGAAAACTTGCTCCTTGGAATCAGCAATTCTTTCAAGCTTTAGAAAGA chr4 + 94230402 46737050 46737049 46737148 46737050 46737049 46737148 99 TACTTACAGAATTGATTATCCCTTTAAGTGCTTGGAATCCTCCAGTGACAGGGAAGACTTGCTCTTTTGTGTCAGCAATTCTTTCAAGCTTTGGAGAGA ....:........:.....:........x..:..:.....x..xx..........:........:..x.x:.....................:..:... 99M 83/99 83.8% 99/94230402 0.0% 0/99 0.0% 33317215 NA +11839 chr4 + 190214555 80055145 80055144 80055528 384 CTTACCTGTGCTTGTTCAAAATCAAGGACACCAACACAATAAACACTAGCCCCAAGTGACCTGGATATCTTTGCCTATGG-AGAATGAGGAGGGAAAGAGAGAAAAAAAGAGAGGGGAGAGGGAGAAAGTGAATT---ATTCAAATATCAAGCTATACATTCCGAGACACACAGCGATGTACAGTGGGGTGTAGAGAACAGTCTCAGTTCAATACTCACCTCTTTCTCTGCATATGATGGCACCAGACCGTCCAACTTGCCATCTGTCAGAGCAATTATGATACTGGAGGTTTTCAAGCCTCCTGCTTTCTGAATTTGTTCATTCGCCTGAAAATGAAGAATAATTATCCAACTCACAATTTAATTTTAACTTTTAACCAGCATGTTC chr4 + 94230402 46738006 46738005 46738336 46738006 46738005 46738336 331 CTTACCTGTGCTTGTACAAAATCAAGGACGCCAACACAGTAAACTCTAGCCCCCAGCTCTCTGGATATCTTTGCCTGCCCCAGAAT----------AGAGAGA------------------GGAATAAGTATTTTTTCATTCAGTGGTCA--TTAGAAACTCTTAGA---------ATAT--------GTGT---------TTTCAACT-AGTGCTCACCTCTTTCTCTGCATACAAAGGAATCTGACCATCTAGCTTGCCATCTGTCAGCGCAATGATGATACTAGAAAACCTTGATGCTCCCTGCTTCTCAATCTGCATGTTGGCCTGAAAATGAAAAATGTTAATTGCACTTAAAATTATATCTTAACTTTTAACTAGGAAGCTC ...............x.............:........:.....x........x..:xx:................::xx-.....----------.......------------------...:x....:xx..---.....:xx:...--:..x.x.:..:x...---------..:.--------....---------.:...::.-.:.:....................::.x..x.:.x....:..:.:...............x.....x........:..::x::.::.xx....:xx:....x...:..:x::..x.............:...:x.x..:xx...:.x....xx..:............:..x.x.:.. 80M1I5M10D7M18D14M3I12M2D15M9D4M8D4M9D8M1D178M 245/327 74.9% 331/94230402 0.0% 61/327 18.7% 33317139 NA +7026 chr4 + 190214555 80057929 80057928 80058154 226 ATAAGTTATGTAAT-TCATA-AGCTTGTTGTATCTAAAATATTTACGTTTGATAGCTACAGAAACAACTTGAAACTGATTGTGTCTGAATGCAGA-TAAAAGTCAAATATTTGGTGCTTTTCAGAAATGAGTGGCAGTGTGTCTTTGAGCATTAGTGTT-TGCTGCCAACAAGTGAAATGCA-----------AGTTTACACAAACAGATTT-----TGCATAAGACAGCCTTCTCCATTCAGTTC chr4 + 94230402 46740003 46740002 46740246 46740003 46740002 46740246 244 ACAAGTTATGTAAGATAATACAATCTGTTTGATCCAAATATTTTATATTCGGCATCTATAGAAACAACTTGAAACTGATTATGTACGAACGCAGATTATAAACCACATACTCAGTGCTTGCCAG-GATGAGTGGCAGCACATCACAG-GCGTTAGTGTTCTGCTGCCAAGAAATAAGCAGCAACCCAAGTCCCAGTTTTCTGAAACAGATTTCATTCTGTAAAAATAACTTTTGTACGATCAGTTC .:...........x-.x...-.:::....xx...:...xxx....::..:.::.x...:.....................:...x:...:.....-..x..::..x...:.::......x:...-:...........::::..x:x.-..:........-.........x..:.:.:xx...-----------.....x.xx..........-----..:.x..:xx.x::..x.x.:x....... 14M1I5M1I74M1I28M1D22M1D11M1I22M11I19M5I29M 162/224 72.3% 244/94230402 0.0% 22/224 9.8% 33317926 NA +6243 chr4 + 190214555 80069416 80069415 80069575 160 TGAAATGATAATGCACTAACCTGTCTCCAGTTAATGGCAAAATAATAGTTGCTTGAGAAGAAAACACAATGAAAGATAATCTCATTTCAGGGCTGCAAAATAA--GAAAAGAGGCAGTTAAAACATTTTTAAAAAGAAATATTGATACGATACAGATGTATA chr4 + 94230402 46744364 46744363 46744515 46744364 46744363 46744515 152 TAAAAACGCAGTGCACTAACCTGTCTCCAGTTAATGGCATAATGACGTGTGCCTGGGAGGAAAACACGATGAATGATAATCTCATCTTGGGGCTTTTAAAAGAGGGAAAAGAAAAAAATAGATTTTAGTCAAACAAAAA----------GTACAGATGCACA .:...xx::.:............................x...:.::xx...:..:..:........:.....x...........:.::.....x:x...x:.--.......::x.:x..:.x:x.xx.:...x.:...----------:........:.:. 103M2I34M10D13M 108/150 72.0% 152/94230402 0.0% 12/150 8.0% 33325052 NA +3529 chr4 + 190214555 80072367 80072366 80072546 180 CCGCCCTCACCAGGAGACCCTGGACC----------TCCCTCGCACACTCACTTGTCCAGGACGAAGTAGAGATCAAAGGCTCTTCTGCAGGAGGGCTGCTC-----------CTGGGCGCGCAGCAGCCCCCCGGGACCGC-------TGAGCACCAACAGCCACAGCCCGGGGAACAGCCA---GCTCCCGGGGCTGCGGGCCGGGGAC chr4 + 94230402 46748347 46748346 46748550 46748347 46748346 46748550 204 CCGCCCGCACCCGGTGATCGCCGGCAGACAAAGCGGCCCCGCGCAGCCTTACTTGTCCAGCACGAAGTACATGTCGAAGGCGCCGTGGCACGACGGCTGTTcggcggccggggccgggctggcggcgg------ggAACAGCAGCGGGAGGAGGAGGAGGAGCGGCAGCGCGGGCCGC-GCCATGGGGCCTCGGGGCGGCGGTGAGGGGAC ......x....x..x..:.x:x.:.x----------:...x....xx..:..........x........x.x:..:.....x.:x:x...x..x.....:..-----------.:....xx..:..:.------..:..x..-------x...x.xx.:x...x:....x....xx:.-....---.x:.:......x....xxx...... 26M10I66M11I15M6D8M7I29M1D4M3I25M 120/173 69.4% 204/94230402 0.0% 38/173 22.0% 33324020 NA +3022 chr4 + 190214555 80083105 80083104 80083179 75 ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTATATGCAGATATATAGCTCTGTCTACTTAGATA chr4 + 94230402 85834538 85834537 85834612 85834538 85834537 85834612 75 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ..x.:...x.................:.xx:...:x:...::.....:.:...:..:x:.x..:x:..x..x.:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -5751433 -88478969 +3147 chr4 + 190214555 80099471 80099470 80099590 120 TGTTGAGCATTTTTTTTACGTTTGTTGGTCGTTTGTATATCTTCTTTATATATATATATATATATATATATATATATATATATATATATTTTACTATACTTTAAGTTATAGGGTACATGT chr4 + 94230402 7319689 7319688 7319799 7319689 7319688 7319799 111 TGTTGAAAGTTTTATTTACGTTCTTGTATTGCCCTTGTATTTGTACAATACATATATATGTATATATACACATTTATTTGTACCTGCA---------ACTTCAACATTTGTGGCAAATGT ......:x:....x........:x.xx:.:.:::x.:...:.x:x:x...:........:........:.:..x...x.:..:x.::.---------....:..xx.x.:x..:.x.... 88M9D23M 71/111 64.0% 111/94230402 0.0% 9/111 8.1% 72779782 NA +10675 chr4 + 190214555 80103613 80103612 80103956 344 AGTGATCACTCCTTCACCAGGAG-TAGGGATGGGAAGAAATAATAACCCAAGGGAGAAAGAGTGATAAAAAACAACTGCTTATAGTGGTGTTT-GGAGAAAATTATGTAAATATTTATGCAAAGACAGCTTTGCAGAACACATCGAGCTGCATTAGAACTGCTTGTGCCAGTGTGCACAGGCAGCCTCACAGTTGGATCAACAGCCTGAAAA-GCAGATGTGCCAATTTCCTGTATTTGATTATGATGATTCCTAATTATGCCAAAGCTGTGGCAATGTCCTTCCCTA-GAATGACTCTTAATTTTGTTTTGCTAAACCACACACACAACCTGTTTTGGATGTGTAAT chr4 + 94230402 46754013 46754012 46754319 46754013 46754012 46754319 307 AGTGATCCCTCC------AGAGGCTAGGGATAGAAAGGGAACATAACCACTGGGAGGATAAATGATGAAAAAC---TGCATACACCACTGTTTTGGGGGAGCCTGCATAAATGTTTGTGC---------TTTGCAAGGCTCA--GAGATTCAGTACAGCTCCCCCTGACAGCATGC---------------------CCGACAGCCTGAAAAAGCAGATGTGCCAATTTCCTGTGCTTGATGATGATAGCTCCTAATTACGCCAGAGCTGTGGCAATGTCCTTTCTGATGCATGACTCTTAATTTTGTTTCGTGAAGTCATCTGTGCAACACTCTTCCGGCATACAAT .......x....------..::.-.......:.:...::.xx......xxx.....:.x:.:....:......---...x..:.x::x.....-..:.:.:x:.:::.....:...:...---------......:::.x..--...x.x..x..x.:..x.::x..x...::...---------------------:.:............-.....................::.....x.....:::.........:....:..................:.:x.-.x...................:.:x..::..:x::::....x:x:..:x.:::.::... 12M6D5M1I49M3D17M1I26M9D13M2D32M21D15M1I75M1I59M 218/303 71.9% 307/94230402 0.0% 45/303 14.9% 33349600 NA +3273 chr4 + 190214555 80127219 80127218 80127318 100 TTTCTTACAGCTTATTTTTATTTTAAAAGAAGGAA-------AAGAATTACTAAAAATAATAAATAAATAAATACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 77634718 77634717 77634820 77634718 77634717 77634820 103 TTTCTTAGAATTAAATTTT----TCATAGGAGTAATTTCAATAAGCGTTATTAAGAAAAGTAATTTAAAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAA .......x.::.x.x....----.x.x..:..x..-------...x:...:...:..x.:...x.x..x....:.x.............:....x..:x...x.... 19M4D12M7I65M 71/96 74.0% 103/94230402 0.0% 11/96 11.5% 2492501 NA +3111 chr4 + 190214555 80127286 80127285 80127366 81 CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCGGCATGAACAAGGGAGCTATCAGGGATCAGATAGCCT chr4 + 94230402 54794475 54794474 54794555 54794475 54794474 54794555 81 CTCACAGGATAAAAGAAAAAAAAAAAGGAAAAAAAATGAAGTACCACAAGAAAAGGGCAGCGATCAGCAGAGAGCTAGCCT ..x.x.::.x....:...........::........x:..x.x.x:..x...x.:..x...x.....x::xx..x...... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 25332811 NA +3335 chr4 + 190214555 80165989 80165988 80166110 122 TTTTTTTAGAATGTTTTTTCCCCCTCTCTTTCTTTTCTTTCCTTTCCTTTCCTTCCTTCTTTCCTCCCTCC-CTCCCTCCCTTCCTTCCTTCCC--CTCTTTCTTTTTCCTTTCTTCCTTCCTTC chr4 + 94230402 53764504 53764503 53764628 53764504 53764503 53764628 125 TCTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC .:.....:x.x......xx:::xx.:..xxx....x....:::::.::.:.:.....::..:.........-.x...x:::::....x....:.--.::.....:x...:.x..x...:.:..:. 71M1I22M2I29M 75/122 61.5% 125/94230402 0.0% 3/122 2.5% 26401485 NA +3331 chr4 + 190214555 80166019 80166018 80166104 86 TCTTTTCTTTCCTTTCCTTTCCTTCCTTCTTTCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCCCTCTTTCTTTTTCCTTTCTTCCT chr4 + 94230402 11873168 11873167 11873253 11873168 11873167 11873253 86 TTTTGGCTTTCCTTTTCTTTCCCTCTTTTTTTCCTTCCTGTTTCCATTGCAGACAATTTTACCTTCATGTTTTTTTTTTTTTTCCT .:..xx.........:......:..:..:......:...x::...x.:x.xxx.xx::..x..:..x.x:.....::...:..... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 68292851 NA +3223 chr4 + 190214555 80166035 80166034 80166103 69 CTTTCCTTCCTTCTTTCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCCCTCTTTCTTTTTCCT----TTCTTCC chr4 + 94230402 7218317 7218316 7218388 7218317 7218316 7218388 72 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCC-TCCCCCCATTCTCTTCCCTAAGGTTTTTCC ....::..::......:x...:.:..:.......::..:...-.....:.x....:..:...----..:.... 42M1D19M4I7M 51/68 75.0% 72/94230402 0.0% 5/68 7.4% 72947718 NA +16111 chr4 + 190214555 80186624 80186623 80187065 442 GCCACTCTTCACAGCTACACCCTGGCCTCTTTAGCTTTCAATTGAAAACCAATTAAAAGTTTCTATAAATCTGTTAGTGC-CCCTTTTATCTGGGGACCCCTGATGCATGCGATATTGCCCTTTAGATGCCTCTTCCGTGTTTTGTTTTACAATTGTTGTATCAATATAATGCGGCCTTTCTTCTGCTGTCTCTATAGATACAGATACACAAGGAAAA-----CCAAAGCTATTCAGGCTCCTCATTTGTCCAGCAG----CCTAACAGTGGTGCCCTTTCTCTGT-GCTGCT-TTCCCTGCTTCGGGAGCAGCAGTTATGGTAGAAGCAGATGGCTACTGATTGGGGGAGCTTTGTGGCTCTAATACTGAATACTTTATGGAAAAGGACTTTATCATGCTTCGTTGGGCAGAGGAACAA-GGGATGAGATTTATGGCCAGGAAAAATAAATCTT chr4 + 94230402 46759300 46759299 46759734 46759300 46759299 46759734 435 GCCGCTGCTCGGGGGTTGTCCCCCGACTCTTTGGTTCCCGATCGAAAAGCAAT-GAAAGTCTCTATAAACCCCGCAGTATACCCTTCCACCCGGGGCCCTCCGCCGC-CGCAGCGCTGCCCTTTGGGTGCCTCTTCTTTTGCTCGTGTTACAATTGTCGCATCGCTATAATGCTCCCTTTCTTCCTCCGTCTCCATAGGCACGGA---GCGAGGCAGAGGCTGCGGCCGCTATTCAGCGCCGCCGTTTGTCCCGGAGCGGTCCGGACAGCGCGGCCCTTTCTCTGTGGCCGCTGTTCTCCGCTCCCGGAGC---------------AGCAGATGGCTGCGGGCCGGGCGGGCTGTGCGGCTCCGGTGCTGAATACTCGATGGAAAAGGGCTTCATCATGCTTGGGTGGGCAGGGGGACAGCGGGCTGAGATTTATGACGGAGGGAAATCAATCTT ...:..x:..:x:.x.xxx...:x.x......:.:.::.:..:.....x....-:.....:........:.:xx:...::-.....::.:.:....x..:.:.x:..-:..:::::........:.:.........:x.xx:.:..x..........:.:...:x........xx.........:x.:.....:....::..:..---:.:...x.:.-----.x:xx.........xx:.x:.:.......x.x..----..x:....:.xx.............-..:...-...:.:...:.x.....---------------...........:.x.:::...x.:...x..:.....:::.:.........:x..........:...:.........x.x.......:..:...:-...x...........:.x::.::....x...... 53M1D26M1I26M1D97M3D10M5I34M4I25M1I6M1I17M15D94M1I34M 300/422 71.1% 435/94230402 0.0% 33/422 7.8% 33427324 NA +9984 chr4 + 190214555 80197314 80197313 80197531 218 CGTTGCCACCCGGGGTAGGCGCTCAGG------ATCTGCGGGG------CGCGGGCAGGCCGGGGGAAAAAGCTGCGAGGCAGGCGGCGCCGGAGGGAGCGCCTGGCCCAGCAAAGAGTTAAAGGGAGGGGACGTGGGCTGTCACGCGTCATTGGGCAGATTATGTGCAGCAAACAAAAAGTGTGTGTCTGCGTGCCAGTCAGTCACTGCATCGGGTCCATCTGTACAAC chr4 + 94230402 46761214 46761213 46761437 46761214 46761213 46761437 224 CGCTGCCCCCCGGGATCGGACGTCGGGTCCCGAAGCTTCGGGGGGTCCCCGCACGC-TGCCAGGTGAGGGCCGTGCG-GGCGGACGG----GCGGCGAGCGGGCGTTCCCCGAAGGGGTTAAAGGGAGGGGACGTGGGCTGTCACGCGTCATTGGGCAGATTATGTGCGGCAAACAAAAAGTGTGTGTCTGCGTGCCACTCACTCACTGCGCCGCGTCCATCTGCGCGGC ..:....x......:.x..xxx..:..------.x..x.....------...:x..-x...:..x..:::xxx....-...:.:...----.x:.x.....xx:.x:..xxx..:.:...................................................:.............................x...x.......::..x.........::.::. 27M6I10M6I7M1D20M1D9M4D139M 166/212 78.3% 224/94230402 0.0% 18/212 8.5% 33436100 NA +3198 chr4 + 190214555 80198960 80198959 80199006 47 AAATACCTGGGTTTTTTTGGGTTTTTTTTTTTTTGTTTTTTTTTTTT chr4 + 94230402 31889193 31889192 31889239 31889193 31889192 31889239 47 AAATACCTAGGTCCTTTTGGGTTTGTTTTTCTTTGTTTTCATTTTCT ........:...::..........x.....:........:x....:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 48309767 NA +3186 chr4 + 190214555 80198964 80198963 80199021 58 ACCTGGGTTTTTTTGGGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTAGT chr4 + 94230402 56386557 56386556 56386612 56386557 56386556 56386612 56 ACCTGG--TTTGTTGGGTTTTTTTTTTTTTGGTGTTCTTTTCTTTTTTCTTTGTAAAT ......--...x...................x.x..:....:......:...x.x.:. 6M2D50M 47/56 83.9% 56/94230402 0.0% 2/56 3.6% 23812407 NA +3066 chr4 + 190214555 80199680 80199679 80199752 73 AAAAATTATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATATATATAA chr4 + 94230402 27325486 27325485 27325558 27325486 27325485 27325558 73 AGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGA .::..x.:::...:xx.:....:.:x.:x.:x.:x:.:...........:...........:..:......:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 52874194 NA +3262 chr4 + 190214555 80199687 80199686 80199733 47 ATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......:...:...::....x..........x...........x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 73342077 NA +28746 chr4 + 190214555 80202886 80202885 80203542 657 GGGGCGGAACGGGCG--CCGGGGCCGCAGGCGGCGCGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGTGCTGGGCCAGAAGCTGGGCGCGCT---CGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCTGAACGGAGGTTGCGGGTCCCTGCCGAGCGGCGG--CGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGCTGCAGCCGCGGCTGCGGCGGCGGCCGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCATGACCTCCGACCTGGTGTACCATATGAGGTCGCACCACAAAAAGGAGTATGCGATGGAGCCCTTGGTGAAGCGGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATT------GACTCGGAAAGG chr4 + 94230402 46763657 46763656 46764232 46763657 46763656 46764232 576 GGGGCAGAGCGTTCAGCTCGGTGCCGCAGCTCGGGGCGGCGGGGGCC-----GTCGGGGCGGAGGAGCGGAAGAGCGCGTTCTCGCAGCCCGCCCGCTGCTTCCCGCCGCTGCC---------GCTCGGCCCCAAGCTGGGCGCACTGGGAGAGCCGTGCC------CCGACGGCCC---CTCCGCCGGCCGCCTGTACGCCGCCG------------------AGCT------GGCCGCCAA---GGAAGGAG---------------CGGGCGGCGGGGCGGGAGCC-----AAGCAGAGCCCCTTCCTCTACGCCACCGCCTTCTGGCCCAAGAGCTCCGCGGCCGCGGT------------------------GGGGCCCCTCCAGCTGCAGCTGCCGTCGGCGCTGACGCTGCTGCCGCCGTCGTTCGCGTCTCTGTGCCTCCCGGCGCAGAACTGGTGCGCCAAGTGCAACGCGTCGTTCCGCATGACGTCGGACCTGGTGTACCACATGCGCTCGCACCACAAGAAGGAGTACGCGCTGGAGCCGCTGGTGAAGCGGCGCCGCGAGGAGAAGCTCAAGTGCCCCATCTGCAACGAGTCCTTCCGCGAGCGGCACCACCTCTCCCGCCACATGACCTCGCACAATTAGCGGCGGCGCGGAAGGG .....:..:..xx.:--:...x.......x:x.x.xx..........-----.:..x.x....x.....x..:.....x...........x..x....x:...:...x....:.---------...x....xx...........:..---x.....:....------........x:---.:..:..:.x.x.:xx:x........------------------....------......x:.---.:.x....---------------..:.......--...x:...-----.................x................................x.....x.:------------------------.......:.x..............x........x..............x..x...:.x..x.....:..x..x..........................:..x..x...........x..x..............:...x.x...........:........:...x.......x:.............x..x........:....................:.........x.x.....x............x.x..............:....------.:.x.....:.. 15M2I30M5D62M9D24M3I11M6D10M3D26M18D4M6D9M3D8M15D10M2I8M5D59M24D275M6I12M 469/563 83.3% 576/94230402 0.0% 107/563 19.0% 33439229 NA +3145 chr4 + 190214555 80247445 80247444 80247580 136 CCCCACTCGTGCCTCTTTTGTCTTTTTTTTTTTCCATTTCTGCTTTCATTCTCTGAAAGCTC-----TTTTTTTTGTCCTGATTCTTAGAGTAATCTTCCAAATAAAATATATATTAATATACCCAATCTTTGTCTCAGGT chr4 + 94230402 35385255 35385254 35385383 35385255 35385254 35385383 129 CCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTTTAATGCTTAAATGCTTTTTTGG---TGAGTTGTA-AGCAATTCT--------AATGCAGGTTTTCACAATCAATTTTAAGCTCAGGT ....x.:.x:x..:.:...x.:..................x...:..x..:.:.x..x...:-----:......x.---...x.:x..-..:...::.--------...::.x:..xx:.:.x:....:..x:x....... 62M5I9M3D9M1D9M8D35M 85/124 68.5% 129/94230402 0.0% 17/124 13.7% 44862190 NA +3763 chr4 + 190214555 80248648 80248647 80248745 98 GTGGTGTCTCACATTTATAGTTCCAGCTACTTGAGAGGCTGAGGCAGGAGGATAACTTGAGCCCAGGAGTTCAAGGCCTGCAGGACCTACAGACAAGC chr4 + 94230402 76033201 76033200 76033292 76033201 76033200 76033292 92 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG-CTGTAGAACATGATGCCAAGC ......-----..:x.:.................:........x.xx.x.:.xx......:.....:..:.:x:..-...:..:..x.:xx.x..... 6M5D65M1D21M 68/92 73.9% 92/94230402 0.0% 6/92 6.5% 4215447 NA +5168 chr4 + 190214555 80266808 80266807 80267337 530 CCCCCGCGGCTGGAAGAATGAGCTTGTCCTTCCTCCTCCTCCTCTTCTTCAGCCACCTGATCCTCAGCGCCTGGGCTCACGG---GGAGAAGCGTCTCGCCCCCAAAGGGCAACCCGGACCCGCTGCCACTGATAGGAACCCTAGAGGCTCCAGCAGCAGACAGAGCAGCAGTAGCGCTATGTCTTCCTCTTCTGCCTCCTCCTCCCCCGCAGCTTCTCTGGGCAGCCAAGGAAGTGGCTTGGAGCAGAGCAGTTTCCAGTGGAGCCCCTCGGGGCGCCGGACCGGCAGCCTCTACTGCAGAGTGGGCATCGGTTTCCATCTGCAGATCTACCCGGATGGCAAAGTCAATGGATCCCACGAAGCCAATATGTTAAGTAAGTTACTCGCTCTCCTACAAAACCCGTCCTA--------------GGCGGCCGCGGAAGATT-------CGGGAGGGACAGCAGGTATTCGCCGGGACACAGGCTCACCTT--------------CCTGAGCCCAGGCCACTGGGACCAAGCTGATACTCAGAAACAGCCGGGCGGGTTGGGTGGAGATG chr4 + 94230402 46769041 46769040 46769488 46769041 46769040 46769488 448 ctcctccCGCCGGCGGCATGCGCCCGGCCTTCCTCTTCCTCCTCCTCTTCCTCTCCCTGCCC------------GCTCGCGGCCGGAGGGAGCGGCTGCCCGGCGGGGGGCActccgcgccttcatcc------------------------------------------------------tcctcctcgtcttcctctccctcctccCTGAc-------ggcggc-----------------------------------gggccc---gggccggcggcggggccggcTGTACTGCCGGGTGGGCATCGGCTTCCACCTGCAGCTGCACCCCGACGGCCGCGTGGACGGCGCGCACGCCGCCAGCCCGCTCAGTGAGTGCCGGGGCCCCTTCCTGCCCGCGTTTTGGAGGTCGGGGCTGTGGCAGCCGCGCCTGGCTGGCCGCACGGAAG---CAGCAAGGTTTCTCCGGG-TGGGAGCTCGCCCTGTCCCAAACCATCCTCTGAACCGCGGCTCCCGGGGCTGGGGTGG-----GGACAAACCTGCGTGGCTTGAGAGCAGGTG .:..:x.x..:..x:.x...x..::.x........:........:.....xx.:x....x:.------------....:...---.::.:....x..xx..xx.:::.....x:...x:..:x.xx..------------------------------------------------------..:.....x...x....::.....:..x:::.-------...:..-----------------------------------.:....---...x..x...xxx...x.x..x......x.:...........:.....:......x.x:....x..:...x:x..x:.:..xx.x....xx....::x:.:.x...:...xx.xx.x:.:.:.x.x:xx.x...::.:--------------...:......xxx.::.-------...:..---.....:.xx...x.....-::x::....:..:.--------------:....:..xx...:x.:...:.:::.x..:-----:..x.x.x.:.x.:..x...:.x.x..:.. 62M12D8M3I43M54D32M7D6M35D6M3D138M14I17M7I6M3D18M1D14M14I30M5D30M 263/410 64.1% 448/94230402 0.0% 158/410 38.5% 33497767 NA +11542 chr4 + 190214555 80274845 80274844 80275019 175 TTTAATTCT-TCACAATGATATAAATAAGAGCCTGTGTTTTATTTTGGGATTTCTGTCATCCTAGGTGTTTTGGAAATATTTGCTGTGTCTCAGGGGATTGTAGGAATACGAGGAGTTTTCAGCAACAAATTTTTAGCGATGTCAAAAAAAGGAAAACTCCATGCAAGTGTAAGTA chr4 + 94230402 46769750 46769749 46769924 46769750 46769749 46769924 175 TTTATTTTTGTCACACTGATGCAAAAAAGAAA-TGTGATTTATTCCGGGCTTTCTGTCGTCCTAGGCGTCCTGGAAATCTTTGCTGTCTCTCAGGGGATCGTAGGAATCCGAGGAGTTTTCAGCAACAAATTTCTAGCTATGTCAAAGAAAGGAAAACTCCATGCGAGTGTGAGTA ....x..:.-.....x....::...x....:x-....x......::...x........:.......:..::.......x........x...........:........x........................:....x........:.................:.....:.... 9M1I22M1D143M 149/174 85.6% 175/94230402 0.0% 2/174 1.1% 33505095 NA +8504 chr4 + 190214555 80277049 80277048 80277301 253 TACAAATGG--AAGCCAATTAGAAAGGTCAAACTGAGAGGTTAAGATACATGATTCCTCTGTCAAAGGCAAGTAACAAATTTCTAGAAATTTGACCCAAATGTCTAAGGATGGCTGGTTGAAATAATGCAGATAATGCAAAAACAGCATCTGTTATTCTTTCTCATCTTGGCAGGCTAAAGTTATTTCATAGAATAATGACTTTTAAACAGTACAAAGCAAGTCTTGCTCTTGTCACTCACTGAAGCTCTTTGAT chr4 + 94230402 46770611 46770610 46770849 46770611 46770610 46770849 239 TACACGTGGCAAATCCATGTTGCGGGAGCAACCTTGGAG---AAGAGACATGGTGCCTTCCTCTGATGAAAGCCATCACTTTGTAGAAACTTGACCCAAACGCCTGAGGATGGCCGGGCTGA-TAATGCCGATAACGCAAAGCCTGCATCTGTTGTTCCTCCCGGCCTTGGCGGGATAAAGTTATTTCATGGCCCAAT------------GCACAAAGCACGCTCTGTGCCCGTCACTCACGGCCACGCTTTGAT ....x:...--..x...xx.x.x::.:x...x..x:...---....x.....:.x...::x..x:.x.x...:x.:x.x...x......:..........:.:..:........:..x:x:.-......x.....:.....:x.x.........:...:.:.:x::......:..x..............:.xx:...------------.:........x.:::..:x.::.........x.xx:.x....... 9M2I28M3D80M1D75M12D45M 166/237 70.0% 239/94230402 0.0% 18/237 7.6% 33506438 NA +3280 chr4 + 190214555 80284434 80284433 80284540 107 AAAAACAACAACAATAACAAAACAACAACAACAACAACAACAAAGAAACAAACAAAAAATACTTGCCTTCAGCCTGCTCGAGATCATATCCAGAGATTCACCAGTAG chr4 + 94230402 24290682 24290681 24290778 24290682 24290681 24290778 97 AAAAAAAAAACCCACAACAAAACAACAACTATAACAACAATGGAATAATAAGCAAAGCATTCT----------CTACCAGAAATTCTAATCAGAAACTGCACAATAG .....x..x.x.x.:..............x.:........:::.:x..:..:....:x..x..----------..:.:x..:..:x..x:....:.:.xxx..:... 63M10D34M 66/97 68.0% 97/94230402 0.0% 10/97 10.3% 55993752 NA +9599 chr4 + 190214555 80286313 80286312 80286673 361 TCTCCTCCT-TAGGCCAAGTTCACAGATGACTGCAAGTTCAGGGAGCGTTTTCAAGAAAATAGCTATAATACCTATGCCTCAGCAATACATAGAACTGAAAAAACAGGGCGGGAGTGGTATGTGGCCCTGAATAAAAGAGGAAAAGCCAAACGAGGGTGCAGCCCCCGGGTTAAACCCCAGCATATCTCTACCCATTTTCTGCCAAGATTCAAGCAGTCGGAGCAGCCAGAACTTTCTTTCACGGTTACTGTTCCTGAAAAGAAAAAGCCACCTAGCCCTATCAAGCCA------AAGATTCCCCTTTCTGCACCTCGGAAAAATACCAACTCAGTGAAATACAGACTCAAGTTTCGCTTTGGATAAT chr4 + 94230402 46771371 46771370 46771729 46771371 46771370 46771729 359 TCTCTGCCTGCAGGCACGCTTCACCGCCGAGTGCCAGTTCCGTGAGCGCTTCCAGGGGAACAGCTACAACACTTACGCCTCAGCTGTGCACCGTGGGCAGCGCTCCGGCCGCCAGTGGTATGTGGCCCTCAACAAGCGGGGCAAGGCCAAGAGGGGCTGCAGCCCCCGCGCCCGCCCCCAGCACGTCTCCACTCACTTCTTGCCCCGCTTCCGGCAGCCCCCACCATCCCAGTTGGCTTTCACTGTCGCCCGCCCTG---AGAAGAAGCCACCCCCTCCTCCACCGCCACCCAAGAAGATGGCC------ACGTCACGACACAGCCCCGGTCCTGGCCGCTACCGGCTAAAGTTTCGCTTTGGGTAGT ....:x...-:....xx:x.....x.x:..x...x.....x.x.....:..:..:.::..:.....:..:..:..:........x:.:..:x.x:xxx.:x:xx.x..x..xx................x..:..:x.:..x..:.....:x.:..x...........x.::x:x........::....:..:..:..::....xx.x...x:....:.xxx:.x::.xx.::.xx.......x..::.:xx:....---....:........:xx:...x:xxx....------.....xx..------:.::.x..:x.x.::x..::::.x.xxx:x...x.:..x..............:..:. 9M1I247M3D29M6I9M6D58M 222/352 63.1% 359/94230402 0.0% 16/352 4.5% 33514942 NA +3092 chr4 + 190214555 80309059 80309058 80309131 73 TTCTCTCTTTCTTTTTCCTTCTTTCTTTCTCTCTCTGTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTTTTTC chr4 + 94230402 92183520 92183519 92183592 92183520 92183519 92183592 73 TTCTTTCCTCTTCTTTCCTCCTTTCCTCCTCTCTCTTTGACTCAAGTTTTCTCCGTTCTTCTCGCTCTGCTTC ....:..:.::.:......:.....:.:........x.xx...xxx..:....:x.::....:x..:.x:... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -11874461 -82355941 +3364 chr4 + 190214555 80311031 80311030 80311112 82 ATGGTGATGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACATGAGCCCTGAAGGTTGAGGCTACAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...:.....:--......:.........::::........x:xx.x.:.x...x...:...x....x..x:....::.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 4277833 NA +3487 chr4 + 190214555 80319186 80319185 80319272 87 TTATTTAGAGGAGAGGGGTTTTAGGTACACTTGGATATACTTGAATATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325471 27325470 27325557 27325471 27325470 27325557 87 TCATTTAGAGCTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG .:........xx...:..xxx.:x...::x...x...:..:....:x.xxx.:...........:.........::..:::.:.:.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 52993715 NA +3129 chr4 + 190214555 80320362 80320361 80320438 77 AATATGCTTCCTCACAGTGGGAGATGGAGAGAAGTAGTCCTGCCCCCCTGCCCCACCACTTTTTTTTTTTTTTGAGA chr4 + 94230402 21137887 21137886 21137963 21137887 21137886 21137963 77 AATATTTCTCTTCTCATTGGATTTTGAGCAGGAGTGGCTCTTCTCCCTTGTTCTACCTCTTTTTTTTTTTTTTTAAA .....x::..:..x..x...:xxx..::x..:...:.::..x.:...:..::.:...x...............x.:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 59182475 NA +3020 chr4 + 190214555 80381357 80381356 80381413 57 TTATAATTACTCTTAACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 27540769 27540768 27540825 27540769 27540768 27540825 57 TCACAATTATTCTTCACACAGAAATTAAGTTTCTTTTTTTTTTTTTTTTTTGTTCTT .:.:.....:....x...:.x.x...xxx...:..................x..:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 52840588 NA +3058 chr4 + 190214555 80381358 80381357 80381424 67 TATAATTACTCTTAACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 63990384 63990383 63990450 63990384 63990383 63990450 67 TATATGTACTTATGAAATACTCATTTTCTCTTTCTTATTCTTTTTTTTTCTTCTATCTTCCTTCTTG ....xx....:x.:.x...:x......:.:...:..x..:.........:..:.x.:..::..:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 16390974 NA +3106 chr4 + 190214555 80381359 80381358 80381423 65 ATAATTACTCTTAACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077431 47077430 47077495 47077431 47077430 47077495 65 ATTGTTAATTGTAATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTT ..x:...x.:x...:........x.x.......x:...x:x...:.xx................. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 33303928 NA +3839 chr4 + 190214555 80390473 80390472 80390558 86 TCTCT-CCTCTCTCTCTCTCTATATATATGTATATATACACACATATATGTATATATGTATATAT---GTATACACACATATATGTATAT chr4 + 94230402 60831534 60831533 60831623 60831534 60831533 60831623 90 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT .....-:............x.:.........:....:......::.:.:x.x..x..::..x...---..x.:::.:...:.:....... 5M1I59M3I22M 64/86 74.4% 90/94230402 0.0% 4/86 4.7% 19558939 NA +3249 chr4 + 190214555 80390479 80390478 80390556 78 CTCTCTCTCTCTCTATATATATGTATATATACACACATATATGTATATATGTATATA---TGTATACACACATATATGTAT chr4 + 94230402 60831543 60831542 60831623 60831543 60831542 60831623 81 CTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ..........x.x.......:......:.:....:..:.:x.x..x...::.x....---.x.:.:.:..::.:.:.:... 57M3I21M 55/78 70.5% 81/94230402 0.0% 3/78 3.8% 19558936 NA +3457 chr4 + 190214555 80390480 80390479 80390568 89 TCTCTCTCTCTCTATATATATGTATATATACACACATATATGTATATATGTATATATGTATACACACATATATGTATATATGTATATAT chr4 + 94230402 60831540 60831539 60831623 60831540 60831539 60831623 84 TCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-----GTCTGTGCGCATGTGTGTATAT .............:.:.....:.:.:..........:::.:::x.x..x:..:..x.:...:-----:.x.:..:::..:...:..... 62M5D22M 57/84 67.9% 84/94230402 0.0% 5/84 6.0% 19558940 NA +3632 chr4 + 190214555 80390497 80390496 80390569 73 ATATGTATATATACACACATATATGTATATATGTATATATGTATACACACA-------------TATATGTATATATGTATATATG chr4 + 94230402 23247722 23247721 23247807 23247722 23247721 23247807 86 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ..:...:...::........x....x.:.......:.:.::..:.......-------------..:...x...x..:........ 51M13I22M 57/73 78.1% 86/94230402 0.0% 13/73 17.8% 57142775 NA +3034 chr4 + 190214555 80390580 80390579 80390646 67 TATATGTATATATGTATATATGTATACACACATATGTATATATGTATATATGTATACACATATATGT chr4 + 94230402 85834549 85834548 85834615 85834549 85834548 85834615 67 TGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.:...:.:.:.....xx.....x:..:.........x...::.:.x....:.:...:.:.:.::. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -5443969 -88786433 +3271 chr4 + 190214555 80390688 80390687 80390758 71 TATATGTGTATATATGTATATATGTATACACACATACATGTATATATGTATATATGTATATATACACACAT chr4 + 94230402 85834547 85834546 85834615 85834547 85834546 85834615 69 TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATA--TGTAAATACATGTTTATGCACACATACACACAT .:.:.....:.:.:.....xx.....x:..:.....--....x...::.:.x....:.:.:.......... 36M2D33M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% -5443859 -88786543 +3122 chr4 + 190214555 80390862 80390861 80390949 88 TATGCGCACATATATGTATATATGTATATACACACATATGCATATATGTATATACACACATATGTATATATGTATATATGTATGTACA chr4 + 94230402 92344692 92344691 92344774 92344692 92344691 92344774 83 TATTTGAATATCTATGCAAA-----ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ...x:.x.:..x....:.x.-----.....:.....x..x.....:.:.....::.....x.x.:.:xxx....:........:.x.. 20M5D63M 59/83 71.1% 83/94230402 0.0% 5/83 6.0% -11953830 -82276572 +3122 chr4 + 190214555 80390862 80390861 80390949 88 TATGCGCACATATATGTATATATGTATATACACACATATGCATATATGTATATACACACATATGTATATATGTATATATGTATGTACA chr4 + 94230402 92341551 92341550 92341633 92341551 92341550 92341633 83 TATTTGAATATCTATGCAAA-----ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCA ...x:.x.:..x....:.x.-----.....:.....x..x.....:.:.....::.....x.x.:.:xxx....:........:.x.. 20M5D63M 59/83 71.1% 83/94230402 0.0% 5/83 6.0% -11950689 -82279713 +3555 chr4 + 190214555 80390870 80390869 80390937 68 CATATATGTATATATGTATATACACACATATGCATATATGTATATACACACATATGTATATATGTATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:....:..:....:...:x:.....:.x...:.....x....:...:.....xxx....:..:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 34327572 NA +3029 chr4 + 190214555 80390915 80390914 80390987 73 ACACACATATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATGTACACACATGTA chr4 + 94230402 61270769 61270768 61270841 61270769 61270768 61270841 73 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...xx...:x:.....x.............:...:...:.::.:.x.:::x:..:.:..x.......xx..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 19120146 NA +3536 chr4 + 190214555 80390964 80390963 80391046 83 TATATATGTATGTACACACATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATACACACACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:...x::::::...:.:.:.....xx.....x.:.:...:.....x...::.:.x....:.:...:........ 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -5443569 -88786833 +3032 chr4 + 190214555 80390991 80390990 80391065 75 ATGTATATATGTATGTACACACATGTATATATGTATATATGTATACACACACACATATATACACACATATATATA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ....:..:..:.....xx:x::....:x..:.....:.x...::...:.......:x....::x.x.:.:...:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -9357659 -84872743 +3024 chr4 + 190214555 80391008 80391007 80391084 77 CACACATGTATATATGTATATATGTATACACACACACATATATACACACATATATATACATATACACATATATACAC chr4 + 94230402 45816031 45816030 45816107 45816031 45816030 45816107 77 CACTCTAGTGAATACGTGTACATGCATACACCCACACATACATCTATACAATTATTAACACAAAAGCACACATGCAC ...x.xx..:x...:..:..:...:......x........:..x:.:...xx...xx...:.x.x:..:.:..:... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 34574977 NA +9839 chr4 + 190214555 80402992 80402991 80403433 442 AGCTTTTGGTG----ACTAAACATTCATGTCCTTAATATGTTTATTTAACAATATTAAATCAGTTTTGAAAAGGTGCAGGTGTATTTGGGTAGCTTTTCTCTCTAAGTAGTGAATTTGCAAAATTAGCAAAAATGTTTTTGCACTTGGATTTGGATAGCGATAACAAACTTTCTCAGCCTAAGAAAAAACCGGAACTCTGACTTAAAATTTTTCTCTGTGATTTCAAAATGTTTTAACTCTAAGTAGTCTTGGAGAAGCTCACAACAATAAAT-AAATTTGTTTACATAAGTGCTGAAAAAAATTTCCTTTTAATAGAAATAGTTGCTCTTTGCGATAAGCAAATAATCTTCAAGCAAAGAAGA-TACAGTATAGGAAAT-AACTTATTTGTGGATTCTAAGGCTGTTATCCCTAAGTTTAAAATGATTCTGCTGTTTTGAATCTTGTT chr4 + 94230402 46779182 46779181 46779587 46779182 46779181 46779587 406 AGGTTTTGGTGTGTTCCCAAGTGTTC-CATCCTTGATGCCCTTAAT--ACAAAATTAAATGTTTTGTGAAGAGGCCCAGGTGTGTTTGGGTAGCTTTCTACTCCAGGCAGCGAATTTGTTACACTAACAGAAGTGTTTTTTCACCTGGCAGTATGTTGCAATAATCAGCATTCTTTGTTTAAGGATAAACTGA------GCCTTCTTTTTTCTCTTTATAAATTGTGGATAGTTTGG---GGAAAAGTTTTGGAATA---------AATAAATGAAATGTGTTTAAGTAGGTGCTGGAAAATGTTTCCTTTTCAGAGGGGAAGTTTATTATTTT-----ATGAGTAATCTTCAGGCAAAGGAAACCGGAGTCCAGGAAATGGATTTGCCAGTGGATTC-----CTGCAGTTCATAA------------CCTGCTGCTTCAGATTTCTTT ..x........----x.:..:::...-::.....:..::x:...x.--....x.......xxx..x....:...:x.......:.............::x...:.:.:..:.......:x.x.:..:..:..:.......x...:...xxx.:x:.x..:....:x.:.x....:x.::....:.x....:.:------.x...xxxx...:...:.:.:.x..xx::..:x...::---x:.:x...:.....:x.---------.......-....x......x:..:......:....x:.........x.x..:::x....xx.:x..x:-----:::.:.........:......:.:.-::x...x:.......-:.:..:::x........-----...:x:.:.x...------------:......:..:::..:.:x.. 11M4I11M1D19M2D145M6D38M3D17M9D7M1I60M5D25M1I15M1I17M5D13M12D21M 265/399 66.4% 406/94230402 0.0% 50/399 12.5% 33623810 NA +4066 chr4 + 190214555 80431393 80431392 80431604 212 TCTCTTCCTTTCTTCCTTCCT--CCCTCCTTTTTTCCCTTCCTCCCTTCCTTTCTTTGCCTCCCTTTTTGCCTC----CCTCACTCCTTCCCTTCTTTCCGTTTCCTCCTCCTCCTCCTCCTGTTTCTTCTCTTCTCCCTCGTCCTTCTCTTCT--------TTCCCTTCCCCTTCTCCTTCTTCTCCTTTTATTTTTCTTAAGAAACTTGGAGAAGCCACTGAGT chr4 + 94230402 71957335 71957334 71957557 71957335 71957334 71957557 223 TTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCTTGTAGGATCAGTACTTTTTCCCACTTCCTTACCTGTTCTTGATGCGGCCAAGGAAA---AGAGTAACCATTAAGT .:...xx.x....x...::.x--:.:.x.:.:...x:...::......:..x.x....:.:..:::..:x:..:----.x.:........:xx....xx.:x.....:xx.:.x:...xxx.x..::..:.:.....:...x..:.......x.--------.x.::..:...x::.....x:::x:::..x..x:xx.:x.:....---:...x.:...:.:... 21M2I51M4I76M8I45M3D16M 125/209 59.8% 223/94230402 0.0% 17/209 8.1% 8474058 NA +3217 chr4 + 190214555 80468711 80468710 80468777 67 TGTAATCCCAGCTACTAGAGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.........x..:........x.xx:x...x.:...........:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 4435500 NA +3077 chr4 + 190214555 80476932 80476931 80476983 52 TGTGTGTGTGTGCGTGTGTGTGCGCATGCGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 5214265 5214264 5214316 5214265 5214264 5214316 52 TGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...:..::.x...:............x:..........::..::x:...... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 75262667 NA +3297 chr4 + 190214555 80504468 80504467 80504536 69 TATATATATATATATATATATATATATATATATATATATTTTCCTTTGAAAGAATGCAATGAATTCTTT chr4 + 94230402 66601388 66601387 66601456 66601388 66601387 66601456 69 TGTATATACATACACACATACACATGAAAAAATATATGTTTTTCTTTTAAATAAGGCAGTTATTTCTTT .:......:...:.:.:...:.:..:x.x.x......:....:....x...x..x...:.x.x...... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 13903080 NA +3096 chr4 + 190214555 80535355 80535354 80535424 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 4502158 NA +3035 chr4 + 190214555 80562025 80562024 80562108 84 AGAGTTTTTGTTTTCTTTTTGCTTGTTTATGCAATCAGTGTTATTTTCAGCTTCAAATAATGGACTATAAGATAGTATTTGCAA chr4 + 94230402 8498635 8498634 8498718 8498635 8498634 8498718 84 AGAATTTGAGTTGGCTGGTTGCCAGTTCAAGCCATCAGTATTCCTTTCAGCTGAAAAAAATCCACTATGTGATAATCTTTAGAA ...:...xx...xx..xx....:x...:.x..x......:..x:........xx...x...xx.....:x....:.x...:x.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 72063390 NA +3629 chr4 + 190214555 80629749 80629748 80629822 74 GTGCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTGGAGCCAGGGAGACAGGGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........:.........x.xx.x...x.:..x..:..x:.:..x:xx...:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 4596545 NA +3321 chr4 + 190214555 80629870 80629869 80629925 56 GGAAAAAAAAAAAAACAAAAAAAACAAAAAAAACCCAGAAAAATTTATTTAAAAAT chr4 + 94230402 9875535 9875534 9875589 9875535 9875534 9875589 55 GGAAAAAAACAAAAACAAAC-AAACAAAAAAAACCCCAAAAAACCCTTTTAAAAAT .........x.........x-...............x:.....:::x......... 20M1D35M 47/55 85.5% 55/94230402 0.0% 1/55 1.8% 70754335 NA +3498 chr4 + 190214555 80634359 80634358 80634446 88 ATTCCGTTGCCAACTTCTTCGGCAATTTACTTAATCTTTTTGGTCCTTGATTCCCTCATGTGTAAAATGGAGAAGACAGTATTTACCT chr4 + 94230402 83501129 83501128 83501215 83501129 83501128 83501215 87 ATTCTGTACCCAGACTCTG-GGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCT ....:..xx...:x:...x-.....x........:..x.x..xx...:::..::.:..:x............xx..:....x...... 19M1D68M 62/87 71.3% 87/94230402 0.0% 1/87 1.1% -2866770 -91363632 +11324 chr4 + 190214555 80637206 80637205 80637583 378 ATAAAAGAGGTATGGTTAATATCCCCTAAATTGTATGCCAACAAAATAGAGGGAAAATGAGAAAAATATGCCATTGTCAGCAAGGTATAATAGATATAATATAATGTACAGTAA-AAGGAGAAGTGATAGACATGCAATTTTTTTCCTGTGAAATGCCCTGACTTTGGAAAGAAATGGTTGTCAATGCCTGTGCATTTCCTTGACAGATTATGCCAGACTGCACAATGGCAGCATTTGTCTTTGGTCTGTGGACCTAAGACAGTTGCTATCGGTGGAACCTTTTTCTGTACAGGTAATAACAAGGTGGTCAGTCATGCAACCCAAAGATCGAGTTTAAAGTTAAAATTAAAGAGGAATTCCCAGCACTATAGCATTTCA chr4 + 94230402 46806295 46806294 46806624 46806295 46806294 46806624 330 ATAAAAAAAGTATTCTTA-------CTGCTTTTTACTTCAACTAATCAAACTGGAAATGCTAAAA---TGTCATTGTCAGCAGTTGGTAATAGATACAGTATAATGTACAGTAACAAGCAGAATCGATGGACAAGCATTTTCTTT-----------CCCTGACTTTGGAAACCAATAGTTGTCAATGCTTCTCCATTGCC-------ATTGT---ATGGTGCATCAAGGCAGTGTTTGTCTCTGGTTTTCAAGCCCAGGACATTTGATGTTGG--------------GCAGAGACAATAACC---TGGTCAGCCATGCAGGTGAAAGATCAAATTTAAAGTGGAAA-AAATGAAGAATTCCCAGCCATACTGTGTTTCA ......:.:....xx...-------..:xx..x..:x:....x..x:.:.xx.:.....xx....---..:...........:xxx:.........:.:...............-...x....x:...:....x...x...:...-----------...............xx...:...........:.x.x....x..-------...:.---.x:x....:x.x.....::.......:....:.x::::..:.:....x...x.:.:..--------------.:.x..::......x---.......:......:x:x.......:.:........x:...-x..x..:...........xx..:x.::..... 18M7D40M3D46M1I30M11D44M7D5M3D58M14D15M3D41M1D32M 242/329 73.6% 330/94230402 0.0% 50/329 15.2% 33830911 NA +13440 chr4 + 190214555 80646096 80646095 80646457 362 TTTGAACCACAAGTTAATGGAAATG-AACAATTTAACTACCAAGCCACAACAGTGCCTCCAGTGTCTGTCATCTTGCTCTGAGCTGGTGCAAATGCGTGTGTTCTACATCTGTATTAGAGAGTTTAGCCTTGACATTCCTTCGTCCCATGCAATATTTGTTAAATAAAAGAAAAAGAAAGGGGCAGGCATGCTTTACCCAGATGTGATATTTAGTCAGCCTGGAAATTCTTTTGCTGTGGCTTTACTCTCACTGAACAGTATCCACCAGTGCTGGCCTCCTGTATCCAATTTAAATTGATGATTGCTAGAGACATATTACCCTAATTTCTAATCAGCTAATTACAATGGATCTACTGTGCAGA chr4 + 94230402 46811717 46811716 46812047 46811717 46811716 46812047 331 TTTGGACTGTA-GTTAATTAAAATGGAAGATTTTGAGTGCCAAACCACAACTGC-TTTCCAGTGTCTGTAATCTTTCTTTAAGCTGACGCAAATACATGTGTTCTACATCTGTACTGGAGCGTTCAGCCCTGACATTCCTTC-TCTAGTGCAGTATTTGTGAAATAAAAGAC-----------TGGATGTGCTTTATACAGATGGGATATTTGATCAGCTTGGAAATGCTTCCACCATGGCT-------------GCAGTG--CTCTATTCCTGACCACCTGTGTTCCATTTAAATTGGTGATTAGTTGAGACTTATT---CTGCTTTCACACCGGTTCATTACTGTTAACTGACAATGGAGA ....:..:::.-......x:.....-..x.x...:.x.:....:.......x.:-::............x.....x..:.:.....::......:.:.................:.:...x...:....:............-..:x:....:.......x..........x-----------::.:::.......:x......x.......::.....:.......x...:::.::.....-------------:....:--.x.:.x.x...:..x.....:.:.x..........:.....:x.x.....x....---..:x....xx.:.:.:.x.....x:.x:.::x..x:..x... 11M1D13M1I28M1D87M1D29M11D59M13D6M2D55M3D42M 244/330 73.9% 331/94230402 0.0% 33/330 10.0% 33834379 NA +3737 chr4 + 190214555 80647929 80647928 80647999 71 CACCTGCAGTTTCAGCTACCTGGGAGGCTGAGGCAAGGGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x..:....:.......:..::........x.xx.x...x.............:..x.xx:..:..:.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 4614722 NA +22028 chr4 + 190214555 80655368 80655367 80656226 859 TGATGAAATACTGA-TTTTAAAAGAAATATTCTGGAATC---ATGACAGGAAATGTATTTTATA-TATCTTAAACTCAAGTCTGTAAAA-GCTAGAATGGGTAC-------ACAGAATTGGTATGGTAAGTGGGTCCTGCAGCTGTGTTGGCTCCACAAATGCTTTGCATGTGTTGTTCTTGAAGAGCAAATAAAAGAGAAAC---------------CC-----CCTCATTTT-----TCAAGGGTATGGGAATATGTTTCTTTT---TTTCATTTT-------AATAATGGTACCAGATAGGATTCCCATTCTATTTTCTTAAAATATTTGAAACAGTGAGTAGACACTTCAACTTGAAGACACAGCTGTTCAGACGATTAGGCACAAAAGAAGCCCAACAATATTCTCAAAGTGAAATTGCAATTGTAATTATGTGAATGTTAGCTACTGGAATTATAAACATGGGGCCCCAGGAGG--AAAACTGGGAAGCTGCCAACTTCATTTTCTGAAACTATTCACATATATCACAAAG--AAACGTACACTTTTCACCCTGCTCTGCTTATTGGCATGCAAACCATCTCCTTGCTCTCTGTTTGAAGAGCTGTTCTTGCTTCTCTTGCTTCTTCTAGTCAAAGGTGGAAGTCAGGTGGCTGGAAG----TTGCTTAAATGATTTCCTCTCATCTGCCCATAATGAACAGCTGCAGTAAATTGCCCAACATCATTTTGAATATGCATAAACCAATGAGCAGCTCAGATTTTTTAATGTA----ACTTTATAT-----TCTTGGCTATTCCGGTGTTTGCATT-----GTTCATTTTTA---AGTCATTTAAAAATTGATACAAATCAAATTATTGTTGCAGTTTTATACTAAAAAA-------AAGACTATTATTATTACAGGACCATTGAGATATGTTTT chr4 + 94230402 46814360 46814359 46815255 46814360 46814359 46815255 896 TGCTGAAACATTGACTTTTAAAGAAAATATTTGGGGATCGTTATTACAGGAAATAAATTTCATGGTGTTTTTAACTTGTATCTATAAAAAGCTAGAAAGGATACCAAGCAGACAGCACTGGTCTGCTGAGCGG-CCCTGCAGCTGCTTTGGCTTCACAAATGTTTTGCATGTGCTGTTCTTAAAGAGAAAAGGAGAAATAAATGGGGGAAAAACAACACCAAAAACCTTGCTTCCCGCATCCAAACCATGAGAATTTCTTCCCCTTCatttttattttttttaataataattGTCTTGAACACGGTTTGCATT---TTTCCATTGAATGTTTGAAATAATTAGCAAAGACTTTAGCTTCGAGAAGCAGCTGTTCCAAAAATCAGGCGTAAAAAGGGCCTGACAATATTTGCAAAGCGAAATTGC------AATTATGTAAATTCCAGCTACTGGATTTGTAAGCATGGGAGCCTGGGAGAACAGAGCTGGAAAGCTCTCAATTACACTGTAGAGAAATCCTGGTTTGTGTTACAAGGCCAAGGCTGTGCTTGGCAGTTTTCACTG------AGCGTACAAA--------------TCGGGTCGCAGACCTGTAC------CCATCGCTTCTTCTATTTTGGTCTGGAAGTTGAGCGGCTGCAAGGTTCTGTCTTTAATGATTTCCTCTTGACCG-CTGTAATGAACAGCTGCACAGCATTGTCCAACACTATTTGGAGTATTTACTGGCCGGCATTCAGCTGAGA---TGAAACGGGAGACACTTCATCTAATCGTCTTGGATGGCTCAGTGTTTGCACTTGAAAGTTTTCTTTTATACAGTCTTTGAGCAAGTG---CAGAACAAATTAATGTCACAGTTTGACACCGACTGACCTTTTGAGAATGATTATTGCTGGGGAGCTCTTGAGGCATATTTT ..x.....:.:...-.......::.......:x..:...---..x.........:x....:..:-.:.:..x....::x:...:.....-.......x..:...-------....x.:....x..x.:..:..-:..........:x......:........:..........:.......:.....x...x:.:.:.x...:---------------..-----...:::..:-----..x.::x:...:....x.x..:.::..---...:.....-------......x..x::::.:.x.:..:x....---...:.x.x:...:.......:.:.x..:.:.x....:.:...x:...x:.........x:.x:..:....::....:::...::........:x.....:........------........:...x::..........x..:...:......:x..::....:--.:.:....:.....x:...:.x..:.x.xx::..x.x:.x::x.:.:.:....:.--..:xx.:::...xx..x::.x.x...------:..:.:....--------------..x.x.:.x...x....x.------.:x.:..........x.:x::xx.......:::.:.....x...----.xx...x.............::x.:.-.::...............xx:x....:......::....x..:...x:.:x::..::::xx.....x...---.xx..:.x:----....:..x.-----......x.:x::.:.........:.-----...:x:.....---....x..x.:x..x..---..:.x.......x...::......x.:..::.xx:.-------.::.:x......::.:x:.::.:x.....::..:.... 14M1I24M3I22M1I24M1I14M7I22M1D69M15I2M5I9M5I27M3I9M7I28M3D108M6D50M2I55M2I26M6D10M14D19M6D44M4I26M1D70M3D9M4I9M5I25M5I11M3I16M3D36M7I38M 560/816 68.6% 896/94230402 0.0% 123/816 15.1% 33841008 NA +3097 chr4 + 190214555 80669103 80669102 80669175 73 TTTTTTCTTTTCTTTTCTTTTCTTTTCTGTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72471342 72471341 72471414 72471342 72471341 72471414 73 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTT ..x...:..:....x:xxx..:.:.....xx......x:..x::...:.::.....:....:........:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 8197761 NA +3648 chr4 + 190214555 80669105 80669104 80669171 67 TTTTCTTTTCTTTTCTTTTCTTTTCTGTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 73754466 73754465 73754532 73754466 73754465 73754532 67 TTTATGTTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTT ...x:x..:.....x.x...:.x.x......:..x:...x...:...:................... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 6914639 NA +3055 chr4 + 190214555 80669132 80669131 80669185 54 TCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACTA chr4 + 94230402 87791846 87791845 87791899 87791846 87791845 87791899 54 TCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGACCA ...::x.:..::..:...:.::............::.....:.....:....:. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% -7122714 -87107688 +3083 chr4 + 190214555 80672731 80672730 80672799 69 GGAGGGTGTATGTGTCCAAGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x.:.:..:.......:x.....x.......:....x.x::..:.x:...:.xx.x....:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 2825967 NA +3035 chr4 + 190214555 80679731 80679730 80679793 63 TCTGTGTGTGGGTTTTTTTTTTTTTTGCTTTGTTTTTTGTTTGCTTATTTTCGAATTGGATTT chr4 + 94230402 2740442 2740441 2740504 2740442 2740441 2740504 63 TCTGTTTTTGGGTTTTTTTTTTTTTTGCTCTATTTATTTTTTTCTATTTCTATGATTTTATTT .....x.x.....................:.:...x..x...x..xx..:.xx:...xx.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 77939289 NA +18921 chr4 + 190214555 80685242 80685241 80685703 462 ATATATTTTTTGGCTGTTATTAAATTTGGGTTACTAGTTTCTCAGGTTTGCTTTGAGATCTCTGAGGGAAAAATCCAGGGCTTCA-ACATTAGCTACCCAATGCAGAATGTCTGGTTTCAAAACAATGCACAGGGAAATGTGACCCTGTGCTTGGGAACTGAAACCTTGCCAATTGCACTGAAGTGTTACATTCATTATGTCATACCACACACATCTGATAAGGGAAGACATAATGCTGTTGGATAGGTTCTTGTATACAAAAACTCTATAGGTCAAGTAAAGAGCTGTTTTTCATTTAATAACTGAACTATGCAGGTGCTAATTTAGACCATATGC---AGGACAATGCAGAAATATGTTACTCCACAGTGGAATGG-----TTGTGTGTGGGGTGGGGGGTGGGTGAGAGAGAGCAAATTGGTATTAAAGGGAATTTTTTGATTAATTAAGGTGCCTGTGCTCTGGTTA chr4 + 94230402 46816830 46816829 46817287 46816830 46816829 46817287 458 ATACATTTTTCCCCAGAGACTGCATTTTGTACATCAGA--CTGAGGTTAAATTTGAAGGATCTGAGGTAACATTCCAGGGCTCCATCCATTAGCCAGCTAGCCCGTGCAGTCTGCTGT-AAAGCAGTGCAATGGGAAATGTGACCCAATGCTTGGGAATTGAACTAGCGCCAACTGTGCTGCAGTGCTACATCCATTATGTCATACCACACACATCTGATAAGGGAAGACATAATGCTGTTGGATACGTTCTTGTATACAAGAGCTCTGCAGGTCATGGAGAGAGTTGTTTTTTATTTAATAACTGAGGTATGCAGGTGCTAATTGGAACCATATGCACGAGGCCAACACCAAAATTTGTTACACTACAGTGAAATGAAGACTTTGCATTT-------CTAGAGGGCAAGAAGGGTTAGTTTTAGATTAATCTTTATTTTTCAATACATTAAGGTAGATGTA---TGGTTA ...:......:xx.x.xx.:.:x....x.xx:.::..x--..x.....x:x.....::xx.......x..x.x.........:..-x.......:.x.:.::x.:x:xx.....x.x.-...:..:....xx..............x:..........:....x:xx:.....:..::...x....:.....:.....................................................x..............:.:....::......x.x.:....:.......:.............:x................x::.........---...x...::.x:....x......x.:......:....:-----...::.x.-------xx:.x...::...::.:x:.:x..x:x.....xxxxx......::..xx........:xx...:---...... 38M2D45M1I32M1D218M3I38M5I8M7D64M3D6M 331/449 73.7% 458/94230402 0.0% 22/449 4.9% 33868412 NA +20957 chr4 + 190214555 80694080 80694079 80695066 987 TGTTTCTGGCTTACAATTTAATATTGGAAATACA--------ACAGTTGATTTCTGAAAGTCACATGTGCAGTGCATTCTTTGGAATCTTCTTTGTTTGATCACCGTTGAACAACACATGAAGCTTTGTATTTTTTCACCTGAATAAATAGTACCCTGCATTTCACCCTTTGAGGTCAGTACATACGTCTCACAAGACAGGCGTTCATCAGCTCTTTTCCTGCCAATTCTAAAGAAAAGCAAAAG-CTCAACACCCATGCCACCTGACTGAGAGT---GGAGTCTATGTTTTATGTTCTTATTCTGCAAGGCCAAATGCTGGTCACCACTAG-TTAAATAGGGTAATGTTTTCTCAGTAAGAAAGAACAATGCATATCTATATTATGCTCT----CAACTTTGATGACTAACATAGTTTCAAAGAAGATGACTTAACAAATACTCTGAGTATTTAAGCTTCATGATAATATGCAGTAACAGGTATGCAGAAGAGTTGCCAATGTCTGTGTAGTGTTTATGA---ATTCAGTTGTTATTTGCTAGAATAAAATGGTATTTAATTGATATCTTGAATTCTAACTTGGTAATAGCTCTCTTTCAAATGTTTCAGCTTTCAATAGGAATAATTGTATTTAATTATCTTTAAATGTCAATTGTGGGTTA---GAAGCATATTTTCAATT-CTTAGGATGTTT-----CAAATTATTTACAGAATGAAT--------------TAAG------------------------------GTGAAATTGCTAGTTTGTTTTTGATGTGTATTGAATTTTACACTTTGAAAAAATTACTGTG--ATTGAA---------TTGTGCAGAATG-----------------AATATATTATAAATTTGAGAATTCAAAACAGAAATAAAAGCCTCATTTACAT------------------------GGCTTAGATGATTCTCCATAACCTGAATTTTTGTTAGATGCAGGAGCCAGATTTTTGGGGATAAAGTTGTGCTAGCAGTGACCAAA---------TCATTAGGGTTTTCTAACAA-------------------ACCCTTTACACTCTGGTATTTTGGTATGCCTCATAGTAGCATCATTTTAAAA chr4 + 94230402 46822825 46822824 46823947 46822825 46822824 46823947 1123 TGCTTCTGGCTGTCA-CTTGATATTGCAAATACAGCGTGCTTACGGCGGAGTTAGGAAAGTCGCACATGGAGCGCATTCTTTGGAATCCTCTTTGTTTTATCATTACAGAACAACCCACAAAGATTTGTATTATTGCACCTGAATAAATAGAGCTCTGCACTTCACCCATTGAGGTCACTGCACGTGGCTTGCAAGGGGAGCATTCTTCAGCTCATTCCCTACTGCTCCTGCTGAACAACAAGAGCCTCGGCACCCGTGCCA--TGACCAAATGTCACACAGTGCATGTTTTTGGTACTTATCTTGAAAGGCCAGCTGCTGGCCACCAGTAGTTTCTGCGCAGCAATATTTTTCTAGCAAGCAGGAACAGCATTCGTCTACGCAGTTCGCTGTTACAACT------ACCAGCATAGTTTTAGTGGAGCAGACTTGCCAAATTCTCTAAATATTTTAATTTCATTGTAATGCATAATAACAGGTGTACAACATAGTTGCCAGTTTCTGCTTGCTGGCTGGGAGAGAGTAAATTATTCTTTGAAAAATGAGAGTAACACTTAATTGATATTTTAAGATACAAATGAACAACAGAAAATTCTCTA--GCTTCAGCTCTTAGCAGTTAGGATGATAGCTTCTTTCTGTAGACTGAGGATTTTGCCTTCCTTGAAAGTTATTCTCATCTGCCCAGAATGACCAGAAACAAACTGTTTCAGGGATATGTTTTCCAAACCTTTCTAAGTTTTTTCTTGTAGCTCTCTAACTCTTGCACATGGGCTCACAGACTTGTTCTCAATGTTT------TTCTACTCTTGTTAGAAGTTATTGTGTCAGTGAAAGACCTTTCTTGTGCATTTTGACCACGGCTGCTCTGCAAATACATTTTTTAATTTAGAAGTCTGAGCAGACACAAAAGCCTGATTTCCATGGTCTTGGCTGCAGAGCCTTGTGAGGCTTATATGATACGACTACTGCTGAGCTGAAGTCTGATTTGGGAGCCAAACTTTTTTTTCCTACATTGTTCTCATGGAGCCCAGACATTTGTACTAGTCAGGATATGTTGCCAAAATCCAAATGTGAAACTGCACCTCCTGCTCACTGGTATTGTGGAAGGCATCTCAAAATCACTGCTTCAAAA ..:........xx..-:..:......x.......--------..:.:x..x..xx.......:..::..x..:...............:.........x....::::x.......x..::...x........x..x...............x:.:.....:.......x.........x.:..:::.x..::....:x::..:...x.......x..:...:.::x.:..:xx...x.:...:..-...::.....:.....--....::.:x..---:x...x:.......xx..x.....::..x.......:x......:.....x...-..xx:::x:.:...:....:::..:...x.:.....::::x::....:::x:.x.x..----.....------..:.:........:.:x.:..xx.....:x.....x....:.:.....x.::.....x:....::::.:........:.:..:x.x........:.x....:x.:x..x:.:x..---.x.x.:..:..x....xx.:.xx.:.:.:::.:...........:..:.:x.x:..x.x:::..:..xxxx:.:..x.--.:.......:.:.::..xx.x:..x:..x:.xx..x::x.x:.x..xx:...x..xx..x---...:xx....:...x:.-.::..:...x::-----....:.:...xx:.:..:x:.--------------....------------------------------:..::x.::.x:::.....:.::....x.------..:...x...xxx.:..:...:....--.x....---------.......xxx..-----------------....:...x.xx.x..x....x..x:.:....x.:........x....x...------------------------......x.....x.xx.xxxxx....::.xxx..:x...x::.......:.:....xxxxx:x.x:....x..x:::.x.x...:.---------.x:.:...:.x.x:.:x...-------------------...:::.:.x.x........x...x.x..x..x:.:x.x..::::..:.... 15M1D18M8I203M1I16M2D11M3I54M1I58M4I5M6D115M3I78M2D60M3I17M1I12M5I21M14I4M30I29M6D26M2I6M9I12M17I52M24I86M9I20M19I52M 628/970 64.7% 1123/94230402 0.0% 170/970 17.5% 33871255 NA +3585 chr4 + 190214555 80696161 80696160 80696243 83 CATGGTGGCACGCACGTGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.........:...........:.::........x.xx.x...x::........::.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 4662964 NA +3037 chr4 + 190214555 80710451 80710450 80710510 60 TCTCTCATAACGTGGGCTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTAAAAAAAAAA chr4 + 94230402 58654083 58654082 58654142 58654083 58654082 58654142 60 TCTTTCTTAATTTTGGATTTCTTTTTTTTCTTCTTTTTCTTCTCCTCTATGTAAAAAAAA ...:..x...:x.x..x.........:..:........:..:.::.:.x.:x........ 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 22056368 NA +12477 chr4 + 190214555 80714871 80714870 80715261 391 TACTAATCATACTTCCGACATTGACTATTTTGTATGTTATTCCAGGAAAAAAATATCAATTCTGACACATGACAATTTCTTATAATTGCATTTAATCAAAGAGTTTATGTTCAAGCTACCTAGAGTTCTTACTGAATTCCACAGGGCTGACTCTTGGCAAGTTTAGGAGT------ACCGATAG----TCTTACTAAAACCTCACAATTTTCCAGGTAGTTCCCTGTCTTACCCAATAAATCTTAGTTTCT-CTTCTCAAAAGTTATTAGACTTCCTGGGCAGAGTACCAAGTTGGGCAGATGTTTTGAAGATGTTCTGATCAATCCAAATTAGGAAATAGGTGTTTGAAGTTCACTATATAAACACAATGATTCTGAAACTTGGCTATGTGATTTGGTTGG chr4 + 94230402 46835029 46835028 46835421 46835029 46835028 46835421 393 TAATATTTTTGCTTCTGAAATTAACCACTTTATGAATTAT-ACAAAAGGAAATGATCAGTGTTGACAGCTGA---TTCTTTGAAATAGGGGGTAATCACAAACACCATTAAAAGTACGCCTGGAGTTC--ACC--ATTCCACAGTGCTGACTCTCATCAAGTTTTGAAATGCTATTACCAATAGCATATCTTTCCTAAGACTCATAATTTTCCAGGTATTGCCCTGTCTGACTCAATAAATTTCAGTTTTTACTCTTCAGAAATCATTATGATTCCTGGGCACTGCACCAAAATTTGCAGATGTTTTGAAGATGTCCTGATCAGCCAAGCTTAGGATATGCGTGTTTTAACCT-ATTATATAGATATGGCATCCTTGAAACCAGACTACATTAGCTGGTTAG ..x..x.:x.:....:..x...:..:.:...:.:x:....-x..::.::...xx....:.x:.....xx...---..::..:x...x.x:xx......x.:.xx::..xxxx.:xx::...:......--..:--.........x.........::x.......x.:.:.------...:....----....x.:x..:x....:.............x.x........x..:........:.:.....:.-..::...:..:.:....x:x..........xx.:.....:x.xx...................:.......::.x.:x......x..:x......x..x:.-.:......:.:.:::::x:::......:x.:...::.x.x:.....:. 40M1D31M3D53M2D3M2D35M6I8M4I63M1I101M1D48M 261/382 68.3% 393/94230402 0.0% 20/382 5.2% 33879842 NA +3015 chr4 + 190214555 80722410 80722409 80722460 51 TCCATCTCAAAAAAAAAAAAGAAAATGAAAAAAAAGAAAACCTGATAAATT chr4 + 94230402 6758232 6758231 6758282 6758232 6758231 6758282 51 TCCAACTTTTAAAAGAAAAAGAAAATAAATAAAAAGAAATCTTAATAAATT ....x..:xx....:...........:..x.........x.:.:....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 73964178 NA +3573 chr4 + 190214555 80724837 80724836 80724964 128 ATTTCCTTCATTCCTTCCTTCCTTTCCTTCCTTCTTTCCTTTCTTTT---TCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCTTTCTTCTTT------CTTTCTCCTTCCTTCCTTCCTTCTTTCTGTTTTTT chr4 + 94230402 50176265 50176264 50176401 50176265 50176264 50176401 137 ATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTT ....:..x:x.:x..x.::.......:.:.:..x.::x.::x.....---.:x........x.::..:x.x...x..:..x:..........::..------.:x:....::x:..:...x::..:....x..:... 47M3I46M6I35M 81/128 63.3% 137/94230402 0.0% 9/128 7.0% 30548572 NA +3289 chr4 + 190214555 80724852 80724851 80724979 128 TCCTTCCTTTCCTTCCTTCTTTCCTTTCTTTTTCTT----TCTTTCTTTCTTTCTTTTTCTTTCTT-TCCTTCTTTCTTCTTTCTTTCTCCT--TCCTTCCTTCCTTCTTTCTGTTTTTTTGAGACAGAGTCTTG chr4 + 94230402 76521921 76521920 76522055 76521921 76521920 76522055 135 TCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTTATCCACACCTAGGCCATTAATGCTGCTTTGTAGATATTTACTACTAAGTCTTG .....:.....:::.......x....x...x.....----...:....:..x:....x.::.x...-..x:...:...x...x:::x.x...--x..x.:xx.x..x....x.:xx.x...:xx..x:....... 36M4I26M1I25M2I41M 86/128 67.2% 135/94230402 0.0% 7/128 5.5% 4202931 NA +3337 chr4 + 190214555 80724882 80724881 80724968 87 TTTCTTTCTTTCTTTCTTTCTTTTTC---TTTCTTTCCTTCTTTCTTCTTTCTTTCTCCTTCCTTCCTTCCTT--------CTTTCTGTTTTTTTGAG chr4 + 94230402 49829835 49829834 49829932 49829835 49829834 49829932 98 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAG ..:.x..:.:.x.xx...x:....x.---........:..:...........:.....:::..::..:...:.--------.x:.:........x... 26M3I44M8I17M 63/87 72.4% 98/94230402 0.0% 11/87 12.6% 30895047 NA +6456 chr4 + 190214555 80732101 80732100 80732286 186 TGTTGTGTGTTTTGAGTGTAGACAATCTAAGCAGGAA-------AAAAGACCAATCTGATTGGAAATGTTCCAGAAATCATAGAGTATTTGAAGGAAGTGATTCAGTTTCATGGTTTTCCCTCATAAATCTTGCTGT--TTATTTGGAGAAAAGCCATAGATACTCTGGAAGTTTGTTTTAAGAATCACACACCT chr4 + 94230402 46839446 46839445 46839634 46839446 46839445 46839634 189 TGGTGTGTG------GTGCAGACGCTTGGAGCAGGAAGTTGTGAAGCAGACTGATCTGGCTGGAAAAGGGCCAAAACAGGCAGAAGACTTAGAGGAAATGATTTGGTTTCATGGTTTTCTCTCGTAAATCTTCATGCCATCCTTTTGAGAGCTGCCACAAGTACTCAGAGGATGTGATGTAAGAATAGGACACCT ..x......------...:....:x.:x:........-------.:x....::.....::......x.xx...:..xxx::...:x.:..::.....:.....::..............:...:........xx..:--.:x...x....:xx....:.::.....x.::::.x..x.x.......x:x...... 9M6D22M7I93M2I56M 125/180 69.4% 189/94230402 0.0% 15/180 8.3% 33892655 NA +8788 chr4 + 190214555 80755537 80755536 80755814 278 TTTACCCTTCAGGGTAATAAGTGGATAA-TAAAAGTGACCGTTGAACTTGAGGGGGAGTAGAAATTCAACATAATCCAATTAATGGTAAATC-CTAGATGAATCTTCGTCACTGCTTAAGAAACTCAAATGTTCCCTTTTCTAAGTTGTAATTCCTGTGCAAGGAGCAGTGCAGTT-TCATTAGGATTCTGTGGCCAGCAGAAATATCCACCTAATTCATTTTACTAGCAAGTACTTTTACACTTCT-CATGAATAAATAAAAGTGATTCTGGCATAAACAG chr4 + 94230402 46846276 46846275 46846551 46846276 46846275 46846551 276 TCTGTCCTCCAGGGTGATAAGTGAAAAAATTAAAATGCCAATTGATCTGGGTGGGAAGTGGAAAGCTGCTATAATCCAATTAATCACAGAGCACTGGATGCCTCTGTGTCAATGC----AGAACTCTGCTGCATGCTCAGCT--GTTGTTACTCTTTCACAATGAGTAGTACAGTTGTCACTGTGAGACTCCTGCCAGCAAAAACATCCGCTGGGTTCATTTTACCACCAAATATTTTTACACTTCTGCACTAATAAATATAAACTACCCTAGCTGGAGCAG .:.::...:......:.......:.x..-.x...:..x.x:....x..x.:x...:...:....x:::x:..............x::.:.x.-..:....xx...x:....x...----::.....x:x..:x:x..:xx..--.....x.:..:.x::...x...:...:.....-...:.:x..xx..x:x.......:...:....:.:x::..........:.x...:..:............-..:x........x..::x.::..:..xx:.:... 28M1I63M1I22M4D23M2D32M1I70M1I34M 184/272 67.6% 276/94230402 0.0% 10/272 3.7% 33909261 NA +3005 chr4 + 190214555 80757699 80757698 80757746 48 TTTTTTTTGTTTGTTTGTTTGTTTGTTTGGTTTGGTTTTTTTTTCATT chr4 + 94230402 31166933 31166932 31166980 31166933 31166932 31166980 48 TTTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTTTGCCTT ........x............x...x......x.x........x.x.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 49590766 NA +3004 chr4 + 190214555 80757701 80757700 80757743 43 TTTTTTGTTTGTTTGTTTGTTTGTTTGGTTTGGTTTTTTTTTC chr4 + 94230402 395121 395120 395163 395121 395120 395163 43 TTTTGGGTTTGTTTGTTTATTTATTTGGTTTGGGTTTTTTTCC ....xx............:...:..........x.......:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 80362580 NA +8726 chr4 + 190214555 80775750 80775749 80776132 383 AATAAAACATGTTTGTCTGGGATGCAAATTCATAAACAAAATGGTTGTAAGA-AGTGAGA-AAGACATGAGTCTTTGTTTTCTTTGATATTATTTTTAACACATGGAAATATTCCAGTAAGTGATTTGAATTGCAATTTGGGAACCAACTGAATCAACAAAATAAATATGACAATTTGATGCCATTTGAGGATATTGGCATTTTATAAAAGAAATTG--TCTTGTAGA-GCAGATGATGGTTCTGGCTCAGGTTGCATCTCTTTTTCTTCTTTTTCTCCCCCTGGATGT--AGACTGTTGCTGTTAGGTTCAAAGCACTCTTGCCAACTCTAACA--CCATGGCAATA-ATTAAAAGGTGGAATTA--GTGAAATGCTGCAAGGTAATAGAGGCT chr4 + 94230402 46851414 46851413 46851782 46851414 46851413 46851782 369 AATGAAGCATACTTGCAGGAGTAACTTATTTGTAAATAAG-----CACAGGAGAGCAAGAGAAGGCTTGAATGTACATTTT------TATTACTGG-AACACACCAAAATATTCCAGTAAGTGAGTTGACTGTGAGTTTACGAACACGCTGACTCAACAGAACAAATACTACAGCTTT-TGCCCTTTGAGTGTGTTGGCACTCTATGAAAGAATTTGTATTTTGTAGATGTAGATGATGGTTCTGGCTGGAGATGC------TTTTCTTAAGTTATT-------AATGTTGAGACCATTTCTTCCAGCCCCAAGTTACTTTTTCCAACCACAATACTCTGTGACAATATATTAGAACTTCAAAGTAACGGGAAGTGCTGAAGAATATCTGGGGCT ...:..:...::...:xx.:.xx:.xx...::....:..:-----:::.:..-..::...-...:.x...:.x.x::....------.....:.xx-......:x:..................x....x.xxx.:...:x....xx:....x......:..:.....:x...::..x-....x......x:.:......:.:...:......x...--.:.......-.:.................x::.x...------.......xxx..x:.-------:....--....::..x..x::..x::...:x:...:..x.....:x:..:.--.::..:.....-....:..xx.x:..x..--.x...:.....x.:::..x:x.:.... 40M5D7M1I7M1I20M6D9M1D81M1D38M2I9M1I27M6D15M7D5M2I44M2I11M1I17M2I27M 245/357 68.6% 369/94230402 0.0% 38/357 10.6% 33924336 NA +3112 chr4 + 190214555 80784467 80784466 80784534 68 TACTTCTTGGCCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTTTTCTTTTCTTTCTTTCTTTTTTT chr4 + 94230402 61949717 61949716 61949784 61949717 61949716 61949784 68 TACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTT ....x..xx..::.....x.x..::x.:::.x.......:xx.x:....................... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 18834750 NA +8590 chr4 + 190214555 80786404 80786403 80786748 345 GAGGGTTTGACATTCAGATTAATGAAGCTGTAAAGA------TAAATTGCTACGTACG-TGCTTCTC-CACTTTTCAAATATGAAC---TACTTTAAAAACTGAAGTCTAATTATGGACTATAGTCTTTCTGTGAATATTAATAAAAGTTTGGCCAAACCTAAA-TTATGCTTTCCATAA--CCTTTTTAAAGTCAAATGAAAACAAAACAAAC-------------CTCAACCAATTATAGTAACTGTGCTGTGTAGCAGGCTTGCAAATATAT-----GATACATTTTGACAGCTGTTTTTTACTGGAATCCTATCAAGGCAATCAC-TAAATATTTTGGGATTCTTAAAATGAGAGAATGCTAAATTTGTAACTG chr4 + 94230402 46855024 46855023 46855384 46855024 46855023 46855384 361 GAGGGTTTGGATTTCAGA-------AGCTGTGAAAAGTGAAATAAATCAGTACCAACACTGCTGCTCGCTTTCTTTCAGTCAGAACACATTCTTCTCAAATTAAAATATAATTATGGACTTGATGTGTTTTGAACATTTTA-------TTTAGCTGAGCCGAAAATTATTTTTTCTGTAAAGCTGCTTTCAAGCaaaaaaaaaaaaaaaaaaaaaaattaaaaaaaaTCCACCTAATTATAGCAGCAGTG---TGGAGGAGGTCTGCTAGTATATTGTATGATACATTTTGACAGCTGCTTTTTACTGGAAGGTTGTCAAATCCATCACAAAAATGTTTTGAAATGTTTAAAATGGGGGAACACATGGTCTGTAGCTG .........:xx......-------......:..:.------.....::x...xx..:-....x...-.x:.:..:x.:.xx....---.x...:xx...:.:..:.x............xx.xx:x..:..x:x..x...-------...:..::.:..x...-....x:....::...--.:x:...x...:x...x:....x....x...x-------------::..x.:........:.:.x...---..x..x...::...x.:.....-----..................:............xx:.:....:x.x.....-x....:.....::..x:........:.:...::.xx::.:....:... 18M7D11M6I16M1I8M1I18M3I52M7D16M1I15M2I32M13I23M3D22M5I49M1I48M 232/328 70.7% 361/94230402 0.0% 50/328 15.2% 33931380 NA +3242 chr4 + 190214555 80799726 80799725 80799817 92 ATAAATATATATATT----TTTATAAATATATAATATATAAATA--TATTATATGATATATATATTATATATTATATTATATAATATATAAATATATA chr4 + 94230402 53982924 53982923 53983021 53982924 53982923 53983021 98 ATAAAAATAAATATAGGAATGTATAAAAGTATAATATGTAAATACATATTACATATAAACTATATCATATAGTACAATATATAAAACAAATACAGATA .....x...x....x----.x......x:........:......--.....:..:xx.xx.....:.....x..:.x.......x.:.x.x.:.x... 15M4I25M2I52M 69/92 75.0% 98/94230402 0.0% 6/92 6.5% 26816802 NA +4478 chr4 + 190214555 80799800 80799799 80799922 123 ATAATATATAAATATATATATTATATATATTTATATATTATATTATATAATATATAAATATATATTATATATATTATATTATATAATATATAAATTATATATTATAATATAATATATAATATA chr4 + 94230402 78074631 78074630 78074746 78074631 78074630 78074746 116 ATTGTATACATCCATATGTAATTTATATAATTGTATATTGTATGATA--GTATATAGATGTATATTATATACTTTACTGTATAT----TATAAATT-TACAATACTGTATAATATATACTTTA ..x:....:.xx:....:..x.x......x..:......:...x...--:......:..:...........:x...:xx.....----........-..:.x..:x:...........x.x.. 47M2D35M4D8M1D26M 88/116 75.9% 116/94230402 0.0% 7/116 6.0% 2725169 NA +3417 chr4 + 190214555 80799975 80799974 80800082 108 ATATAATATATGTAATATATATTATGATATATAATAAGTAATATATATTATATATAATATATAATAATATATAATAAATGCTATAATATATATTA--------TATAAATAAAATA chr4 + 94230402 46018831 46018830 46018938 46018831 46018830 46018938 108 ATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAA---AAGATAATATACAGTA-----CATAGAATATATTAGTCGTATGTATAGATATGATA ...x.x::...:.::.....::.:........:....:..xx::....x........---.x:........:.:..-----:...:x........--------....:...x:... 57M3D16M5D14M8I13M 73/100 73.0% 108/94230402 0.0% 16/100 16.0% 34781144 NA +3003 chr4 + 190214555 80800748 80800747 80800793 46 TGTGTGTGTGTGTGTGTGTGTATATATATATATGTATACATATATA chr4 + 94230402 65759992 65759991 65760037 65759992 65759991 65760037 46 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ....x..:...:........:...:..:.x.:...........:.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 15040756 NA +3377 chr4 + 190214555 80800748 80800747 80800805 58 TGTGTGTGTGTGTGTGTGTGTATATATATATATGTATACATATATATATATGAGTTTA chr4 + 94230402 85834541 85834540 85834598 85834541 85834540 85834598 58 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA .....x...............:...xx..:..x.:........:..x...::x..... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -5033793 -89196609 +19284 chr4 + 190214555 80808663 80808662 80809290 628 CTAACCTGCTATTCCATGTGCTGCACATGTTAGGCATTAACTAATGTGATTTTTCAAGCATCTCTTACATGTGACACATTCAGGACTGCATTCTTTTGAG----------GGTCTCGATTCTGAGAGCCACAATTATAGGTTAG---AG-----CCCATTCTCCCTTTTTATTTGTGGTTCAGTCTTAATGTGGTCATGGTACATAGTCCCATGATTTACGATCAGATGGATTAACCACTGACTTATGCCTCACATAAGCATTATAAATTTATATGCATATCTTCCAGATGC---AGAGAAAATGCAGAGAGATTTTCGTAAGGGATTATTCAGACCATCTTAAGTAGGGAGAAACCAATCCAAAGCAAAAACAGCTTTTGCATATGGCATCCA---TAGCTGCAAGGTTATTTTGCAGAAAGTGCTCAGATGAAGCAAAGATGTCCTTGATAAAGGCAAAAAATAAAAAAGCCAACAAACTATTTATAGCTGGGGCTATCTAATTTAGAGTAAACCTTT------------TGCCTCTAACCACATTTGCTGCAGAATTCTTCTGGCTAATTGCAGGCTACTCCTACTTTACATGGAGACATCTGCACTATGGCA-CACCCTATAATTATATGGGAAGGGATCACT----CATGATTTTGTTGATAGC chr4 + 94230402 46862955 46862954 46863571 46862955 46862954 46863571 617 CCAGCCCATCAGCCCAGGAGCTACATATGTAAGCCATTAGA-GATACGACTGT-CAAGCATCTCCTTTATATGATAGATCTAGGAGTAAATGTGTGTGAGTCCATGGAATAGGCTTGATTCAGTCAACCAAAATTGTAGGTTAGCTGAGTTTTCCCTTTTTTTTTTTTTAATTCATGGCAAGGTTTTAATGTGGTCGCAGTACATAGTCACATGATTTACAGTCAGATGGATTAACCGCTGCCTTATGCTTCACATAAGCCTTATAAATCCATGTGCATACCTTCCAGATGCTAGACAGAGAGCATTGAGACAGCTTTAAGATGCATTAGTGAAGCTATTTTCCGATAGGAAA------------------------TATACACATGGGACTGAATCTCACTGAAATGATATTTTA-GGAGATTGC--------AGCAGAGATGTGCTTGAC----------------AGGGCCCAATAGCTATTTATAGGCAGATCTGTCAAATTTTGGATAAACTTGTCTCTTTTTTTCCTCCTTCCAACCACATTTGCTGCAGGATTCTTCTGGTTAACTGTGGGCTGCTGAAGCTTTGCAT-GAGCCATCTGCCCAGTGGCACCACCCTGTAATTACCTGGGAAGGGATCCCTGTCCTGTGATTTTGCTGGTAGC .:.:..::::.x:...x.x...:..:....x..x.....:x-:..::..:.x.-..........:.x:..:...:.x..::....x.:x..x:x.x....----------:.x..:.....x.xx.:...x....:........---..-----..:x..:.:::....x...::...:xx:..:...........:::..........x..........::...............:...x.......:..........x........::..:......:...........---.x...:.::::x....x.x:..::x:.x.x....x.x.::.:..:..xx.xx:...:.------------------------.x.:..:....x.::x.---.x:...x..x.x......:-:..:.x...--------....:......x.....:----------------.::...x.xx.:..........x::.:x..:..x.....x.::.....:.x.------------.x.:..:.................:..........:...:..::....:..xxx:....:...-...x.......x.x:.....-......:......:x............x..----::........:..:.... 41M1D11M1D46M10I34M3I2M5I138M3I58M24D17M3I19M1D9M8D18M16D52M12I63M1D20M1I30M4I18M 412/576 71.5% 617/94230402 0.0% 93/576 16.1% 33945708 NA +23270 chr4 + 190214555 80821384 80821383 80822367 984 TTTAACTCCTTTAATAGTAACCCCCACCTCCCTCATTTTTGGAAAACGAATTATACAAACAAGCTTCTAAAGAAAAGAAATGCTTCAGAACTGAGCAGAAGATGTGTTCTCCTGGTAAAAGAGAAAATGAAA-AGCGGCACACCTGCTTCCAGCTGGGCCCCC-CTTTGCAAATCTCACACAGCCTCTCCATGTGAAGTCTTGTCCAAGTCAAACAAGTAGCAATTTTAAAGTAGCACCTAAAGAGGAACTTGGGCAGGATTTGCCAGCAAAACCCCAGACCCTAAAAGTTCCTGCTGTACAGGCTTTATTTTCATTTCCTTGACCCATTTGCAGAGACTTGTTACTGATGGCCGGCTGGGCCTCCCTGTACACAGCACACGAATAATAAACAGAGGCCAGCTGACACCCAGAGACACCTGCAGAGTACT-CACAGTGCAGGATTGTTCATCC-----AAGGGGAAACATTTTGATGGGGAGGTG-------GATGCATAGCCATCCCCTGGCTCAGTACACAACACACACACACACACACACACTCAC-AGACACGCCTGAAAGAAGTCTACCATGGACTCTCCTGAGGGCCTGCTGACCTGCCAAGAGAGCTAATAAAAAAGAACCGCTGACGATGGTAGCAATGTGTGAAAAGGCCTCTGTAGGTAGTCATCCCCTTGTATCCCAAGCACTTGGACTTGGTGAAATTAATTTTTCAGAAGT----TTGGTAGAAACTTCATGCAAGCCTTTGCACAAATACTTTAATGCACTGAGCTTATTATTCCAGTTTTTCGGGATCCAACTTCTTATTTATTCATAAATTACATATTTGCCAATGAAAATACTTTGTTGAAGGTCTGATCAAGCAGGTGCATTCAAGTAGCCTGAAAAG----------------------------------CCTTCACTAACATTTGAAAACTTTTCAGAACTGGATTTCTTGGAATTGACAAGAAAAGCCTTTTTTTAAATTCCATGAATTCACGTTTGAAATATTTTTATAAATAAT chr4 + 94230402 46866080 46866079 46867027 46866080 46866079 46867027 948 TTTTACTATTTTTACAGTAA--------TTTTTCTCCACTGGAAAACAAATTATACAAACAGACTTCTAAA--AAGCAAATCCCTCAGCACTGGGCAGAGGAAGCAGTCCTCTGGTACGATGTGGAATAAAACAGCAGCACACCTGCCTCCAGCTGCTCTCCTGCCATGCAGATCTCACGCAGTCCAGCTATGTGAAGTCCCTTCCAAGTCAAACAAGCAGCAATTTTTAAGTAGCACCTAACAAGGAA--TGAG--------GCCAGCAAGCCCC--AACCCCGAAGGTTCCTGCTGCACAGGCTTTATTTTCATTTTCCTGACCCGTTTGCACAGAGTTGTTGCTGATGACCTGGCCTGCCTCCCTGCACACAGCAAAGCAATAACAAACACAGAGCAGCTGGCACTTTGAGACACCTGCAGCACACCAAACACTGGGGGATTGTTCGTCCTGCATGATGGGACA-ACTCTACTGGCGTGGTGTCCACACGATGCAC-GCAGTGTCCTGG------ACAGGACAGCTCCAGGGCCCCAGAGAGTTTCTTGGCCAATTTATAGAAACTATACCATA---TTTCTTA-------------CTGCC-AGAGGAAGAATAAGGATGACCAGCAGAGGA------------ATAAAAGAGCCCAT-TGTGCAGCATTGCTGTTGT----------CTTGAA---GGCAGGCTCAATCCT--AGAAATGCCATCAGTATGATATTTGGGC-AGCCTCTGAGCACAC-CTTCTATAAAC----CTTATTATTCCAGATTCTCATG-CCTCACTCCTTATTTATTCATTAACTAGGTGTTTTCCAGTGAAAATACTTGGATGTCCTTCTGATGGAGCAGGTACAGGAGAG-AGTGTTaaaaggaaaaaaaaaaaaaaaaaaagaaaaCTCCTAAACCCTTAAGCAATATTTATGGACTTTTGAAAGTTGAGATTCTTGGAA--AAAGAGCTACATTTCTTTTCAAATACT-----TTCCAGGCTGGAATCTTTTGCTAATTTAT ...x...x:...x.:.....--------.:::..x::x:........:.............::........--..:x....x.:....x....:.....:..x.::x..::......x:.x:x::...:...-...:..........:........xx.:..:-.:x....:.......:...:.:xx.:..........::x...............:.........x.............x:.....--..:.--------........:x...--:....::..:..........:...................:.:......:......x...x.....:......:..x.x:xx.........:........x.xx.....:.....x..:x......:...::x.............x::..:-x...x..x:.........:...-----:.x....x.-.:.:.:x...x.x....-------......:-..x:.x:.....------...x:...xx:x..x:xx.x..x.x.x.:x.-x.:.xx:::.:x.::..x.x......:---.:..:.:-------------.....-....::xx.....::.x..x.x..x..x..------------:.:...::...:x.-.:x.:..:xx.x.:x....----------....:.---..::::x.:...::.--....:.----.::...x:.xx..::x..-.....:..x:..x.:-...:x..:x..----.............x..:..:x.-:.:x...:.............x..:..x:.:...x...:...........x.x..xxxx......x:.......:..xxx:..-..:x.x.....----------------------------------....x.x:..:....:x::......x.:.::..::x.........--:.x:..xx.x:::.:....:....x.:-----...xx.x:..:...x....xx...x.x.. 20M8D43M2D59M1I30M1I85M2D4M8D13M2D152M1I22M5I9M1D17M7I7M1D12M6D31M1I27M3D7M13D5M1D30M12D14M1D19M10D6M3D15M2D6M4I18M1D15M1D11M4D22M1D83M1D11M34I45M2D27M5D29M 624/894 69.8% 948/94230402 0.0% 144/894 16.1% 33955304 NA +3406 chr4 + 190214555 80864444 80864443 80864557 114 ATATACCTATATAAGTATATATATACCTATGTGTATACATATATACACATATATATACATATATACCTATATATACGTATATATACATATACGTATATATAGGTATATATATAT chr4 + 94230402 21109187 21109186 21109296 21109187 21109186 21109296 110 ATTTGCTTATACATGTGTGTCT----CTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ..x.:.:....:.x..:.:.x.----..:..x.::..:x.....::..x:.:......x::.:........::..:...:x:..:.x.x.::......:.:x:.:x....::.. 22M4D88M 68/110 61.8% 110/94230402 0.0% 4/110 3.6% 59755257 NA +5932 chr4 + 190214555 80869941 80869940 80870138 198 AATAAATCAGCTCTTTTATATTTTTGTC----------TTATTCTCTATTCTGTG-CTACCAGTCCGTGATCTTTATTCGTGACAGAAATTCTCATGGGCAAGAGATATCAGGATACATCGACTATGCCCACAGGCTAAAGACGGAAGATTTTGAAGTCTACTTTACTGGAAAAAAAAGACTTCTTCCAAGGCCTACAGATATAAGGTA chr4 + 94230402 46873458 46873457 46873666 46873458 46873457 46873666 209 AAGAAATCTGTACTCATATGTATGTTTCCATCCATCATTTGTGGTCTGGTTTGTGTCTTCTGGTCCTTACTCTATATTTGTTGCCACAATTCTCATGGCCAGGAGATATCTGCCTACATTGGCCATGCACCCAGAATGACGACCAGTGATTTTTAAGCCTACATCAATGAGAGAAAAAGACTTCTCCCTCATAATAAGGACCTGAGGTA ..x.....x.:x..:x...:.x.x.x..----------..:.xx...:x.:....-..x.::....x.:x...x....:..x:.x:x...........x..:........x.xx.....:.:.:....x.x...:x.:.x...x::x......x...:....x.:.x..::.:............:..xx:xxx..x:..:x.:..... 28M10I17M1I153M 131/198 66.2% 209/94230402 0.0% 11/198 5.6% 33996483 NA +3133 chr4 + 190214555 80875524 80875523 80875593 70 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--.::.x....:.:...........::........x.xx.x...x.:........::.:.. 9M2D59M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 4842327 NA +3606 chr4 + 190214555 80880590 80880589 80880668 79 GTGGTGGGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--......::..........::........x.xx.x...x.............:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 4847389 NA +8144 chr4 + 190214555 80895816 80895815 80896125 310 AAGCAACAGAAAGATGGTGAAAAGGGTAAA---GGAATAAGAAATTAGAATTCATTCAAACAAAACTCACTCGGATGAATGAGGAAGAAGGTTTTTTCCCGCCAACTCAGTAAATGTTTAATCTGGAAAAGCATGCTTCCACATCTGGCTTATGTTT-AATATTGTAAATATAACTTCTTTCATTTTTAA--------TTTTATTTTTGATGTGAATTTTAGTTTATGAACAAAAGTAAAATAAAAATCAGTGGAGAGACATTGTATTTAATGTTACAAATA------TTAAATATTTCAAATAAAATATTCAGAATACAAAATAGTA chr4 + 94230402 46877642 46877641 46877963 46877642 46877641 46877963 322 AGGCAACAGAGAGCAAGTGGCA--GGTAGATGTGGAGGTAGAAATTAGACTGCACGCAGGCCTGAC--GTTTACATGTGTGAGAAGAAAATTCCATTGCTGCCAACTCAGTAAATGTTTAATTTGGAGATGTGTACTTCCACATCTGGCTTATACTTAAATACTGCAAATATTGTTTCTTTCACTTCTAATTTCTCCCTTTTTTTTCCAGTTCAAGCTTCAGTCTCTTAAGAAAGATAAAGTCTTCTACA--GGAAAGGTTGTCTTTTTACTGCTTTGAGCAATCTACCTATACATTTGAAATAGGAAATGGAAACTGCAAGTTAATA .:........:..xx:...:x.--....:.---...:xx..........x.x..:x..::.xx:..--::.::x...x:....:.::..:x.::x..x.:......................:....:.x.::.:..................::..-....:..:......x::........:..:...--------....x...::::.x::.::..:...:.x.x..x...::....:.xxxxxx..--...:..::xx.x.x....x..:.x::.::.------:..x.:....x.....::.x..xx.:.x.:...:x..:.. 22M2D6M3I33M2D89M1I32M8I52M2D30M6I40M 199/304 65.5% 322/94230402 0.0% 24/304 7.9% 34018174 NA +3715 chr4 + 190214555 80902512 80902511 80902628 117 ATATGTATGGATACAAATATATATTTTATCCATATGTATCTGGATTATTATTTTATCCATATATATGTAATATATACACACACACACACACACACACACACACACACACACACACTT chr4 + 94230402 46140803 46140802 46140903 46140803 46140802 46140903 101 ATATGTGTGCATTCAAATGTATTG-----CAATAAATGT-TACACTATTATTTTGT----------GTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTT ......:..x..x.....:...xx-----.x...x:.:.-.:x.:.........:.----------..........:........x.x....:........::::.:.:...x.... 24M5D10M1D16M10D51M 76/101 75.2% 101/94230402 0.0% 16/101 15.8% 34761709 NA +3099 chr4 + 190214555 80924507 80924506 80924574 68 ATTCATT-ATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATCTGTGTCTGTA chr4 + 94230402 85834534 85834533 85834602 85834534 85834533 85834602 69 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .......-:...x.................:.xx..:..x::...:....:..x...:x...x.x..:. 7M1I61M 51/68 75.0% 69/94230402 0.0% 1/68 1.5% -4910027 -89320375 +3716 chr4 + 190214555 80943926 80943925 80944008 83 CGTGGTGGCGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:....:--......:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 4910729 NA +7220 chr4 + 190214555 80948170 80948169 80948431 262 TTTGTCCAACACAGATGTGGACTCATTAATTCTGAAGTATGTTTCCCGTGAAAGGCAGTTGTTTGGGAATGGTAACAGTG-GAAACAGAAACTTGTGCAGGTCTTACAACAAGTAATATGAGTTCATTGGTTAGGAAATTCCAAATGC-------AATAAGAGTTTGGTTGCATTGAAAACAGGACCACTGGCTTTAACTTCCCTGCAGCTGTATAACATCTGGAACAAATAAGCCAAGTTTCTATTTTTGAGTGAAGAATGCTTGTTTG chr4 + 94230402 46894781 46894780 46895042 46894781 46894780 46895042 262 TTTGTACGGAACAGATCTAAGATGATGTTTTCTTTGATGTGCTTCCCATGAAAGACGGTTGTGTATGAATAGCAACAGTACAAAATATCAAATTATATGCATTTCAAAATAAG-----TGCGTCGGTTTGTTAGAAATTCAAAAATGCATACCTAAAAATGTGTTTGGTTGCATTGAAAG-AGGGCCACCAA-TCTAACTT-CCTGCAGCTGCAGAACATCTGTAACAAATCAGCAGCTCCTTACTGTCTACGTGAAGGACTCTTGCATG .....x.::x......x.:::x.x..xxx....xx::.:..:.....:......:.:.....x.:x....:.:......:-:...:.xx..x..:.:::x:.:.:.x..:...-----..x..:x:..x.....:..x.:xx......-------..x.x.x.................:-...:....:::-.:......-..........:.x........x.......x...x:xx::.:xx.x.:.:x......:.:x....:x.. 80M1I32M5D30M7I25M1D11M1D8M1D68M 170/254 66.9% 262/94230402 0.0% 16/254 6.3% 34053389 NA +3218 chr4 + 190214555 80954860 80954859 80954929 70 CATGGTGGCAGGCACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x..:...:...........::........x.xx.x...xx:.x.........:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 4921663 NA +6180 chr4 + 190214555 80990935 80990934 80991145 211 ACTATCTGTGAGACAGATGGGAACTCCTGATGCATACCAGGCGACTGTTCTT-CAGCAAAGAAAACAAAAACCCAGGTGCAGAATGTATTGCAACAGTGCAGATGGGTCTTCAAGG--GTGTTCACTGTTTACAAGAAAGAGGAACAGAGCTCTCATCATTGAGTGACCACTCTTC-CTGGGGATCTATTTC-CCCCAGCT-GGCCTCAAGCAGAAT chr4 + 94230402 46897969 46897968 46898182 46897969 46897968 46898182 214 ATTCTCTGCAAGGCAGGCAGGGACAAGCAACGCAGGCCAAGCCACTGTTCCCGCTGCAAAGAAAATAAAAACACAGGTGCTGAACATACTGAAGCCATGCAGATTAGCCCTGTGTGCAGTATGCGCTCTTTACAAGAAGAAAAAACATCATTCTTGCTATT---TGGCTATTGTTCGCTGGAGGCATGTTTTATTTCAGCTCGGCTCCAAGCAGAGT .:.x....::..:...:::..:..xxx::.:...x:...:..x.......::-.x..........:......x.......x...::..:..x.:.x:.......x:.:.:.xx:x.--..:.x.:..x..........::.::....xx::...::::...---..:.:.:.x...-....:.::x.:...:-:::.....-...::........:. 52M1I63M2I43M3D12M1I15M1I8M1I15M 136/208 65.4% 214/94230402 0.0% 9/208 4.3% 34092966 NA +3146 chr4 + 190214555 80999013 80999012 80999091 79 GTGATGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCCGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.....:--......:.........::::........x.xx:x...x::........::.:..x::x:..:..:.. 10M2D67M 52/77 67.5% 77/94230402 0.0% 2/77 2.6% 4965812 NA +4757 chr4 + 190214555 81000813 81000812 81000994 182 ATATGAATTTTCCA-AAGAAGTGATTTAGGAAGATGTAACCTCTGTTGGAGTTTGGAACTGGACAATGTTTCTTCTTGAAATGTTTGCCTTATTTTTATAAACAAATTAAAAGTGCAAGAATTTCTCTACCCCCAACCTTCCCATTGCTTTGATTA----TATGTTTGGTTGCTAAA--TAGCAACCCA chr4 + 94230402 46899302 46899301 46899482 46899302 46899301 46899482 181 ATTTGGATATTCCAGAAGGAGTGATTTAGGAAGCTGGACAGTGTTTTGAGATTTTGAGCCTGCCAGTATATCATACTGAAATGTTTGCCTTGTTTTTATAAACACTGGAAA---GCAGGTACGCTTTCATTCC--ACTCTC---TTGCTTTGATGATTATTCCATTGAGCTGCTACATTTGGCAAACCA ..x..:..x.....-...:..............x..x.xxx.x.x...:::...x..:.:x.x..:.:.x..x.x:...............:............xxxx...---...:.x.:x::.::.::..--..::..---..........x.----.x::..x:.:.....x.--.:....x... 14M1I96M3D19M2D6M3D12M4I17M2I10M 122/174 70.1% 181/94230402 0.0% 15/174 8.6% 34101511 NA +7409 chr4 + 190214555 81031197 81031196 81031607 411 CAACCCTCGGCTCCGCCGCCGGCTCCTTGCGCCTTCGGAGTGTCCCGCAGCGACGCCGGGAGCCGACGCGCCGCGCGGGTACCTAGCCATGGCTGGGGCGAGCAGGCTGCTCTTTCTGTGGCTGGGCTGCTTCTGCGTGAGCCTGGCGCAGGGAGAGAGACCGAAGCCACCTTTCCCGGAGCTCCGC---AAAGCTGTGCCAGGTGACCGCACGGCAGGTGGTGGCCCGGACTCCGAGCTGCAGCCGCAAGACAAGGTCTCTGAACACATGCTGCGGCTCTATGACAGGTACAGCACGGTCCAGGCGGCCCGGACACCGGGCTCCCTGGAGGGAGGCTCGCAGCCCTGGCGCCCTCGGCTCCTGCGCGAAGGCAACACGGTTCGCAGCTTTCGGGCGGCAGCAGCAGGTGAGTG chr4 + 94230402 46904594 46904593 46904940 46904594 46904593 46904940 347 CAATCCGCGGCTCTG-----AGCTCCCCGCGCA-----------CCGCGTCG----CGGGTGCCGGGGT-CCGCGATGGCA----------GCTCCGGCCCGCTGGGTGCTGTGCCTGTGCCTGGGCTGCCT------GTGCCTGGCTCCGGGGGACGTGCTGCGGGCACGCTGGGCCGGGCTGCGGCGGAGGGCTGCGCGGGGCGGCCGGGCGAGAGCAGGTGACCA------CGGGCTGCAGCCGGGGGACAAGGTGTCGGAGCACATGCTGCGCCTTTACGCGCAGTACAGCGCTGGTCCGGCG-----------GAGCCGCCCCGAGAGCCGCCCG-------------CCCCGCACCTCCGCCGCGGGAACACCGTGCGAGGGTTCCGCCCGAGGGCTGCAGGTGAGCG ...:..x......:.-----:.....::....x-----------....:x..----....x....:x.:-.....xx..:.----------...xx...xx..x..x....x.x:.....x.........:.------.x.......x.x...:..x:x:.:.x:.x...x:.xxx.x.:...x..x---.::....:..x:..:.:...x:..:x..xx....:..x------..:..........x::........x..x..:...........x..:..:.xxx:.......:.x.x:.x....-----------.:..:x..:x...:.xx..:..-------------.:.x..x...x...x:x..x.....x..x..x:.x..:..xx..:x:..x.........:. 15M5D13M11D8M4D13M1D11M10D41M6D49M3I38M6D73M11D22M13D61M 232/344 67.4% 347/94230402 0.0% 70/344 20.3% 34126603 NA +9668 chr4 + 190214555 81034036 81034035 81034307 272 CATACCTGATTAAAATTATTTATTGTTCTAAACCTAGAATATCTTCGATTGAAATTTAGCTGCTGTGGTCTCCCTCTGATTACTTTCTACTTAAACCATTACTTGATGGTGGGTGGCATTCATCC--TAAATACACTTTCTGCTAAACCCTTTTCTCCTCCCTGAATGCTAT-GTAGTTGGTGTGCCAAAACCGTAAGTTTGGAGTGCTTGTAAGTTTTTTTGT-CATGTGGAAGGGTTTACATAAA----------GATAGGTT-TTATCTTTCCCTTTGCAAAAG chr4 + 94230402 46906503 46906502 46906782 46906503 46906502 46906782 280 CATATCTGATTAAAGATATTTATTGTTCTAAACCTAGAAGGTCTTTGGTTGAAATCCCATCTCTGTGGTCT--TTCTGATTG-----TATTTATACTCTCACTTGACTTTGGGTGGCAGTAGTCCTATAAACACACTTTTCACTAATCCCTTTCCTCCTCCTCCAATACTTTCACAGTTCAAGTGCCAAAGCAATAAATTGGAAGTAGTTATAAGGTTTTTGACGCTTCTATAAGTATTTATGCAAAATATCTAACCAATTGGCTGTTGTCTTTCTCTCCCCATAGG ....:.........:x.......................x:....:.:.......::x:::x.........--:.......:-----..:...x..:x.:......:xx.........x.x:...--....:.......:::....x......:.......::x...:..x.-::....x:x........:.x:...:..x.:...:x..:....x.....x::-.x.x.:x...x:....:::...----------:..x..:.-..:......:..::x..x.:. 71M2D9M5D38M2I45M1I51M1I22M10I8M1I21M 190/265 71.7% 280/94230402 0.0% 22/265 8.3% 34127533 NA +38354 chr4 + 190214555 81045725 81045724 81046651 927 TTTTCCTTCCTAGAAACTCTTGAAAGAAAAGGACTGTATATCTTCAATCTGACATCGCTAACCAAGTCTGAAAACATTTTGTCTGCCACACTGTATTTCTGTATTGGAGAGCTAGGAAACATCAGCCTGAGTTGTCCAGTGTCTGGAGGATGCTCCCATCATGCTCAGAGGAAAC---ACATTCAGATTGATCTTTCTGCATGGACCCTCAAATTCAGCAGAAACCAAAGTCAACTCCTTGGCCATCTGTCAGTGGATATGGCCAAATCTCATCGAGATATTATGTCCTGGCTGTCTAAAGATATCACTCAACTCTTGAGGAAGGCCAAAGAAAATGAAGAGTTCCTCATAGGATTTAACATTACGTCCAAGGGACGCCAGCTGCCAAAGAGGAGGTTACCTTTTCCA---GAGCCTTATATCTTGGTATATGCCAATGATGCCGCCATTTCTGAGCCAGAAAGTGTGGTATCAAGCTTACAGGGACACCGGAATTTTCCCACTGGAACTGTTCCCAAATGGGATAGCCACATCAG-AGCTGCCCTTTCCATTGAGCGGAGGAAGAAGCGCTCTACTGGGGTCTTGCTGCCTCTGCAGAACAACGAGCTTCCTGGGGCAGAATACCAGTATAAAAAGGATGAGGTGTGGGAGGAGAGAAAGCCTTACAAGACCCTTCAGGCTCAGGCCCCTGAAAAGAGTAAGAATAAAAAGAAACAGAGAAAGGGGCCTCATCGGAAGAGCCAGACGCTCCAATTTGATGAGCAGACCCTGAAAAAGGCAAGGAGAAAGCAGTGGATTGAACCTCGGAATTGCGCCAGGAGATACCTCAAGGTAGACTTTGCAGATATTGGCTGGAGTGAATGGATTATCTCCCCCAAGTCCTTTGATGCCTATTATTGCTCTGGAGCATGCCAGTTCCCCATGCCAAAGGTA chr4 + 94230402 46913661 46913660 46914587 46913661 46913660 46914587 927 TTTATTCTCCTAGGGAGCCCTGGAAGCCAGGAGCTGTATGTTTTTAACTTGACTTCACTCACCAAGTCAGAAAATATCTTGTCAGCTTCGTTGCATTATTATATCGGTGATCTGCTGGACGCTGACTGGAACTGTTCCCAGTCTGGAGGCTGTTCTCATCGTGGGCACAGGAAACCTGAAATTCAAATACATCTTTCGGTGTGGACCTTTCCATCTGTTGGGAACCAGACCCGGGGTCTGGGCCACTTCCTAATAAACATCTCCAGCTCTTACAGCGATGTCCTTTCCTGGCAGTGGAAAGATATCACTCAGGTCCTGCACAAAGCAAAACAGAGCAATGAACTTCTGATTGGTGTCAAAATGGATTCAACCAGCCGTCACCTGT---GGAGGAGGGCACCATTTCACTATGAGCCCTACATTCTGATATATGCCAATGACTCTGCCATTTCAGAGCCAGAAAACGTTGTTTCCAGTTTGCAAGGGCACCACAATCCTTTGGCAAGGGTCTTCCCTAGGCCAGAAAATCACATGAGGAGCAGCCTT----GGAAAGCGGCGGCGAAAACGCTCCACCAACGTCCTGTTGCCATTGCAGAACAACGAGCTTCCAGGAGCCGAGTACCAGTACAATGAGGATGAGAGGTGGGAAGACAGAAAACCGTACAAAACTTTCCAGCCTCGACTGGCCGAGAGGGCAAAGAGTAAGAAAAAGCAGAGGAAGAACCACCACCAGAAGAGCCAGACTCTCCAATTTGATGAGCAGACCTTGAAGAAGGCGAGGAGGAAGCAGTGGAATGAGCCACGGTATTGTGCCCGACGCTATCTCAAGGTGGATTTTGCTGACATTGGCTGGAGCGAGTGGATTATTTCCCCAAAATCCTTTGATGCCTATTACTGCTCAGGGGAATGTCAGTTCCCAATTCCAAAGGTA ...x:::......::.x:.:..:...xx.:.::......:.:..:..::....x..:..x........x.....:..:.....x..:x.::..:...x:.:...:..x..x..:xx::..:::::.:x..::...:.xxx.........x..:..:....:..xx..x.......---.x.....:..xx.......x.::......:.:xx..:::x::.:.....:.x:.::xx:..x.....::.x::.:.::.:..xx...:x...:.:x.x...:.:x.x.......x..xx..............:x..:..x:x..:..x...x.:.:::.x..::.:..x..x..xx.:..x..x:xx..x.xx:.x..:..x...:---:.......x:...x....xx---.....:..:..::..:.............:x.:........x..........::..x..x..x..:..:..:..:....:x...::.::x:.x:.::::x.:..:.:::x:..x.::.....x..-...x...:.----:xx:.....x..x::..:.....:..:::x...:..:....x:...................x..:..x..:........:..x:........:x......:..x.....:..x.....:..::.:...x...::x:xx.:..:.:.:xx....:...:..:..:.....:...::x.x:..:.:............x.....................:....:.....:.....:..........x...:..x...x....:...x.:x.x..:........:..:.....x..:...........:..:........:.....x..:.................:.....x..:.x...:........x..x......... 175M3I207M3D20M3I125M1I9M4D384M 628/920 68.3% 927/94230402 0.0% 14/920 1.5% 34132064 NA +3402 chr4 + 190214555 81047800 81047799 81047871 72 CACAGTGGCATGCCCCTGTAGTTCCAGCTACTCTGGAGGCTGAGGCAGGAGGATCACTTGAGTCCAAGAGTT chr4 + 94230402 76033197 76033196 76033266 76033197 76033196 76033266 70 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ........--...x.x................:x::........x.xx.x.:.x.......::...::..:. 8M2D62M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% 5014603 NA +11250 chr4 + 190214555 81049995 81049994 81050359 365 CTGCAAAAGTTGACAACCTGTTCTCTAATTCAGAACAGCTGTGT-----------------TCTTTCTGCCTTTCCCAAATTCCAGGCTTTGCCCTTTCACTGATTCCAATTAGATAGTTTCTGGGCTATCACACCCATGTGGGCTGGACTGGAAGA--ATTGTGGAGTA-----------AAACTCCATGGCCCAGGTCAGGAATGAAGGCTCTTAGCTGATGACATGCTCTCCCCTGCTAATGCATTTGTAATCAAATTCAACTCGAGGACATCA---------------TACACGGCTTGGCAGGTGCAGGCCTGACCATTGTAGATTTCATTCACAGACACGGCAGTTTGGATTTTTCTGATTTCTAGCCCTTACAGCCAATCTGTT---------CTCCCAGAGAGAGATTCTT chr4 + 94230402 46915964 46915963 46916377 46915964 46915963 46916377 414 CTCCTAAAGCTGACAACCTGTTGTGTAATTAGGAACAGATGTGCCTCATCACCCCCCCCCCTCCTTCTCCACCTCTAAATTTTCTGGCCCTACCCTTCCCCTGATTTCAATTAGCTGCTTTGACCGCTATTATACTCATGTGTGTTGGGCTTACAGAGCACTGTAGAGCACGCAGCCAGGCAGACCCTCT--CCCAAGTCAGGAATGAAAGCCCATAACTGACATCATTTGCCCCACTCCTAATATATCTCTAATGAAACTCAAC---AGGGCAGCAAGTCTCCCAAGGATGCACACAGCTCAGCAGGTGCAGCCCTGGCCACAGCTGGACTCATTCACAGATTTGGCAGCTTGCAGTCTGCTCAGTGCTGTTCCCTCCCACCGTTCTTTTTGGCCTCACCTCCTACAAGAAAATCTTT ..x.x....:............x.x.....x:......x....:-----------------..:....x.x::..:x..x..:.x...::.:.....:.x......:.......x.:x...xxxx.....:.:..:......x.:...:..x:x...--.:...:...:.-----------.:..:.:x.--....:............:..:.x..:....::x...x:x.:..x..x.....::..:.x....x...:.....---...:..x..---------------:....:...::..........x....:...:x.:x.:x:...........:x:.....:...x.x.:.x..x.x.x..:x:..:.x.x:..:x...x..---------....:.x.:::.:..::.. 44M17I96M2I11M11I9M2D73M3D9M15I99M9I19M 248/360 68.9% 414/94230402 0.0% 59/360 16.4% 34134031 NA +17477 chr4 + 190214555 81053297 81053296 81053973 677 ACGCAGTTCCACCTAACATATGTGTTCTTCTTTCATTTCTTTCTCTAGTCTTTGAAGCCATCAAATCATGCTACCATCCAGAGTATAGTGAGAGCTGTGGGGGTCGTTCCTGGGATTCCTGAGCCTTGCTGTGTACCAGAAAAGATGTCCTCACTCAGTATTTTATTCTTTGATGAAAATAAGAATGTAGTGCTTAAAGTATACCCTAACATGACAGTAGAGTCTTGCGCTTGCAGATAACCTGGCAAAGAACTCATTTGAATGCTTAATTCAATCATTAGTTTATTTTTATGGACTTCTTCCTGTTTTTTTTTTTTTTTTTTTTGCACTGCCAATGCATTTTGTTTCAAAAGATTATTTCTATAGTCAGAGGGGAATGAGCAAATAGACTGAAGATTGCCACCAAGGAAAAGA----ACTGTATTTGTTTCTGAATG---------------------------------------TAACTTAAAGCAAGATTTTTAGT------AAATATGGACATCTATTTCTCTTT---TTGTAATCAAACACAACAACTTATCAAACT-----GTTTTTAGAACTGTTAG-AGAACACACTGGTTTATTTTTGTA-ATGTTCTTTGAAAACAGAATGGAGAAGCAGCAATAGCTTGTCATTTAT-------CTCATTTAATGACTAATGGGAAATAGAGA----------ACAATTTCGCGTTTTGAA-TTAGGCTTATTGCCTTAGAATCCTGAGAAA chr4 + 94230402 46918728 46918727 46919434 46918728 46918727 46919434 707 ATGCAGTTCTA-----------TTTTCTGCTTTATCTTGCTCTTGCAGGCCTTGAAGCCATCCAACCATGCCACCATCCAGAGCATAGTGAGAGCTGTCGGCGTTGTCCCTGGAATTCCTGAGCCGTGCTGCGTTCCTGACAAAATGTCATCTCTCAGCATCTTATTCTTCGATGAAAATAAGAATGTGGTTCTCAAAGTGTACCCCAACATGACAGTAGAGTCCTGCGCGTGCAGATAACGTCTCAGAAGAGCCTTTAGAAGCACTAAGGAGATCACTCGCCATTCACTGGGGTTCTTTTCATG---ATTCCTACTTTTTGTTTGCACTGCCAAGGCATTTCCTTCCAGGAG------------GGGAAAAAAAAAAAAGTAAATAAATCCAA-------ACAAAAAAAAAGATGACAATGGAGTGGATTCTGAATAGCAATTCCAAGGGACTGGAACACCAACTTCATTCATCCTTAAATTTGATCGAGGCATTAAGTCATGGCAAAGGGGACTGACTGTTGCTGTTGAAACTGAGATGAAAGAGAAATTTACAGAAGACTTCGAAATTTTTGGGTCTGTCAGAAGGACACACTGATCTATTTTTGTACATGATTTTGGAAA--------------CAGCAGTAGCTGTTAATTTTTGCCTCCATTCTTCTGGTGACTGATGGGGGAGGGAGATTAGAAGTCTACTTTTATTCGTTTTAAACCTAAGCTTTCCATCATAGTTTACTGAGTAA .:.......:.-----------.x....x....xx:..x:.::.x:..x.:...........x..:.....:...........:..............x..x..:..:.....:...........x.....:..x..x..x..:.....x..x.....:..:........:.................:..x..:.....:.....:.................:.....x..........x.xx..:.::.x:.x..x...xxx:...xxx:....:.x.::xx.:x:.:x..x::.:...x..---x..::.x:.....x.............x......:x..:..::..------------.xx.:.::::..x:..:.....:.::x..-------..x..::......----.x..x.x.x.x........:---------------------------------------...x..x:.x.:..::x..x...------...x:x.:x::x..:..x..x..x---:..x:..x...x.x..xxx:x:.xx.:...-----:.....:.:x....:..-..:........:.:..........-...x.:..x....--------------.....:.....xx.x....x.-------:..x.:.::.....:.....::.x:....----------..xx..x:x......:..-:..:....x::::.x...xx.x.....x.. 11M11D283M3D45M12D29M7D13M4I20M39I23M6I24M3I30M5I17M1I24M1I13M14D21M7I29M10I18M1I30M 439/630 69.7% 707/94230402 0.0% 124/630 19.7% 34134569 NA +3473 chr4 + 190214555 81108426 81108425 81108505 80 CCAAAAACATTGTTATGA---TATATTCAACTTATTTATATATTAACACTATTGGTTTTTTTTTTTTTTTTAATTTTCATTTC chr4 + 94230402 55280377 55280376 55280459 55280377 55280376 55280459 83 CTAGACACACTGTCAGGAACATATCTTCACTTCAATTATATAATAATATACTTGGCTTTTTTTTTTTTTTTAATATGCTTTTC .:.:.x...:...:.x..---...x....x:.:.x.......x...:.:xx....:..................x.x.x.... 18M3I62M 60/80 75.0% 83/94230402 0.0% 3/80 3.8% 25828049 NA +3069 chr4 + 190214555 81126679 81126678 81126728 50 TGAGAAGCGTCTGTTCCTCTCCTTTGCCCACTTTTTGATGGTTTTTTTTT chr4 + 94230402 13574737 13574736 13574786 13574737 13574736 13574786 50 TGAGAAGCGTTTCTACTTCGCCTGTTCCCACTTTTTGTTGGCTTTTTTTT ..........:.x.x.:..x...x.x...........x...:........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 67551942 NA +3220 chr4 + 190214555 81140427 81140426 81140485 59 ACTATGTACCCACAAAAATTAAAAATAAAAATAAAAATAATTTAAGTAAATACATAAAT chr4 + 94230402 71764406 71764405 71764463 71764406 71764405 71764463 58 ACTATGTGCTCTGAAATTTTAAAAATAGGAATAAAAACAATTTAAGTAAA-ACAAAAAT .......:.:.xx...xx.........::........:............-...x.... 50M1D8M 48/58 82.8% 58/94230402 0.0% 1/58 1.7% 9376021 NA +3096 chr4 + 190214555 81155038 81155037 81155107 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 5121841 NA +3028 chr4 + 190214555 81168348 81168347 81168406 59 AGTATTAGTTGAATGAAGGAAACAACAAAAGGAGGGAAGGAAAGAATGAATATTCACTA chr4 + 94230402 80189229 80189228 80189287 80189229 80189228 80189287 59 AGTATTTGCAGGCAAAAAGATGGAACAAAAGGAAGGAAGGAAAGAAAGAATACTCATTA ......x.:x.:xx:..:..x:x..........:............x.....:...:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 979119 NA +3185 chr4 + 190214555 81189038 81189037 81189103 66 AAGAAAAAAAAAAGATTAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGCTAGCAA chr4 + 94230402 78003592 78003591 78003657 78003592 78003591 78003657 66 AAAAATGAAATCAGAGCAGCAAAAATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAA ..:..x:...xx...x:.:x......:x......:.....x.............x..:.:.x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 3185446 NA +4713 chr4 + 190214555 81199513 81199512 81199666 154 ACCTTTGGCAGGTTATATAAT-TCTGTGTGCCTCAGTTTTCTCATATATAAAATGGGAGTGATTAATAATATCTATCTTATAGGTTTATTGTGAGGATTAAATGATTCA-GTATTTGCGAGGCATTCAGAGTGGTGACTGGCACATA--ATTAGTGGT chr4 + 94230402 83501142 83501141 83501293 83501142 83501141 83501293 152 ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGTTTATTCAGGATCTTCAGAGTG------AGTACATAATATTAGTAGT ..::.x....::...:x...:-.x.:...............:..:x.:........::x....x:xx.x..:...:..:.:...xx..........x.x..x::....x-..x.x.x.::.::x.........------:.:.....--......:.. 21M1I87M1I23M6D8M2I9M 103/148 69.6% 152/94230402 0.0% 10/148 6.8% -2301629 -91928773 +3266 chr4 + 190214555 81261783 81261782 81261840 58 AGAAAATAGAGAAAATGAAAAATGTCATTTTTCAGAGAGGTCTTCATGAAGTAGCTAA chr4 + 94230402 28896827 28896826 28896884 28896827 28896826 28896884 58 AGAAAATGTAGAAAATGAAAAATGTCATTTGACAGGGATAAATTTATAAAGTAGTTGA .......:x.....................xx...:..x:xx..:..:......:.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 52364956 NA +3263 chr4 + 190214555 81264337 81264336 81264415 79 ATTGCATTTGGAAGATCTTTAATTGCACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTG chr4 + 94230402 7075041 7075040 7075119 7075041 7075040 7075119 79 ATTGCTTACGAAAAATCTGAAATTTTACTCTTGCTTTTTTTTTTTTTTTTTAACTTTTTCATCTTATACAAGCAGAATG .....x.x:.:..:....xx....x:......x:.................xx:.....:x.:..x.xx.::.:..:.. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 74189296 NA +3020 chr4 + 190214555 81360075 81360074 81360130 56 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAG chr4 + 94230402 76033206 76033205 76033261 76033206 76033205 76033261 56 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ....x......:.........:.::........x.xx.x...xx:.x......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 5326869 NA +3048 chr4 + 190214555 81365559 81365558 81365641 83 GGGCAACAAAAATGAAACTCCATCTCAAAAAAAAAAATAAAGTTAAGCAATAAAGAAAAATACAAAAAAGAAAACCACGCATG chr4 + 94230402 63832027 63832026 63832109 63832027 63832026 63832109 83 GAGTAACAAAGAGAACACTGAAGCGTGAAAAAAAAAAAAAAATTAAACATTGAAGAAATTTCCATGAAAAATAACCTCAAATG .:.:......:.x:.x...xx.x.x::..........x...:....:..x.:......xx.x..x:...:.x....x.:x... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 17533532 NA +3418 chr4 + 190214555 81402972 81402971 81403060 89 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAA-----------------GGAAGGAAGGAAGGAA---GGAAAGAAA chr4 + 94230402 1500702 1500701 1500810 1500702 1500701 1500810 109 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaa .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:..:..-----------------....x:..........---.....:... 64M17I16M3I9M 63/89 70.8% 109/94230402 0.0% 20/89 22.5% 79902270 NA +3199 chr4 + 190214555 81405534 81405533 81405618 85 AAAAAGAAAGAAAAGAGAAAGAGAAAGAAAAAGAAAAAGGAAAAGAAAGAAAGAAGGAAAGAAAGTAAAGAAAAAGAAGAGGAAA chr4 + 94230402 48565842 48565841 48565926 48565842 48565841 48565926 85 AAAAAGGGAATACTGAGAAAGGGGACATCAATGAAGAAAGATCAGAGAGGGGGTTTTAAAAAGAGTAGAGAGAAAGAAGAGGAAA ......::.:x.xx.......:.:.x:xx..x...:..:..xx...:..:::.xxxx...:.:....:...:............. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 32839692 NA +3198 chr4 + 190214555 81405552 81405551 81405620 69 AAGAGAAAGAAAAAGAAAAAGGAAAAGAAAGAAAGAAGGAAAGAAAGTAAAGAAAAAGAAGAGGAAAAA chr4 + 94230402 84536568 84536567 84536635 84536568 84536567 84536635 68 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAA-AAGGGAAAGGGAGAGGAAGAA ...:.....::.........::x..x:...:x.:....x:......:-..:.:...:.:.......:.. 47M1D21M 49/68 72.1% 68/94230402 0.0% 1/68 1.5% -3131016 -91099386 +3148 chr4 + 190214555 81463929 81463928 81464001 73 TCCAGGCAAG-----TATTTATCCCT--GGGCACTATTAACTCCAGGAATCACTTCCTAACAATTTCTCCAGGGGAAGAA chr4 + 94230402 36354705 36354704 36354784 36354705 36354704 36354784 80 TCCAGGTAAGATGTGTAATTTTCACTCCAGCTACTTTTAACTGCAGGAAACACTCCCTAACAATTTTTATAGGAAAAGAA ......:...-----..x..x..x..--:.x:...x......x......x....:...........:.x:...::..... 10M5I11M2I52M 57/73 78.1% 80/94230402 0.0% 7/73 9.6% 45109224 NA +3137 chr4 + 190214555 81469616 81469615 81469686 71 TAAATACATATGTATATATGTACATATATGTGTATATATACACACACACACACACACATATAAATAATCTA chr4 + 94230402 23247717 23247716 23247787 23247717 23247716 23247787 71 TGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTA .:.x:.::.:.....::.:::....x....x::....:........:...........x:x...x..x:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 58221899 NA +3014 chr4 + 190214555 81469634 81469633 81469674 41 TGTACATATATGTGTATATATACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ...........:.:......:.......x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 77060552 NA +3166 chr4 + 190214555 81488584 81488583 81488627 44 TTCTTTTTTCCTTTCTCTCTTCCTTTCCTTTTCCTTCCTTCCTT chr4 + 94230402 64726540 64726539 64726583 64726540 64726539 64726583 44 TTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTT ..:..............x....:..::...........:..:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 16762044 NA +3456 chr4 + 190214555 81522599 81522598 81522675 77 CTTCCTCT-CCTGCTTATGCAGAGGCTGTTCTTAAAAAATACTAAACACACACACACACACACACACACACACACACA chr4 + 94230402 84895757 84895756 84895834 84895757 84895756 84895834 78 CTTCCTATACTTTCCTAAGAAGTGGAAGCTTTTGAGAAATACTCAAGATATACAGGCATACACACACACACACACACA ......x.-.:.x.:..x.x..x..xx.:.:..:.:.......x..x.:.:...x:..:................... 8M1I69M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% -3373158 -90857244 +3173 chr4 + 190214555 81575375 81575374 81575427 53 AAAAAAAAGAGAAAGAGAGATACACACACACATACATATATACATATAAAGAA chr4 + 94230402 67195530 67195529 67195582 67195530 67195529 67195582 53 AGAAGGAAAAGAAAGGTATATACACACACACACACACATATATATATAATAAA .:..::..:......:x.x.............:...:.....:......x:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 14379845 NA +3009 chr4 + 190214555 81582283 81582282 81582339 57 TGGGCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATATTTGGTAAAGACCAG chr4 + 94230402 42875450 42875449 42875506 42875450 42875449 42875506 57 TGGGCGGGTTTTTTTTTGTTTTTTTTTTTTTCTGCTGTTGTCTTTGAAAAAGACAAG .....x.:.........x.............:.x:.xx.:.x....:x......x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 38706833 NA +3152 chr4 + 190214555 81594193 81594192 81594270 78 GAACATTTTCATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 87898153 87898152 87898228 87898153 87898152 87898228 76 GAGTGTTTTAATTTTC--ATTTCTGTCTCATGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTT ..:::....x......--x.....x....x:x...:x..:..x:.x..:.x.....:....:.....:....:..... 16M2D60M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% -6303960 -87926442 +3198 chr4 + 190214555 81594194 81594193 81594292 99 AACATTTTCATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 68890607 68890606 68890705 68890607 68890606 68890705 99 AACATTTTTGTTTCCCAGTCTCATTTTCACATTTTTGTTTCCTGGTCTCATTTTCTATGAATTGCTTTTTTTTTTTTTTTCTTTTACTTTATCTTATTT ........::...:.:xx.:..x:.:..x.x:.x..x...::.xx.:.:x....:.x.xxx..x:...............:....x:...x.:..x... 99M 64/99 64.6% 99/94230402 0.0% 0/99 0.0% 12703587 NA +3212 chr4 + 190214555 81594199 81594198 81594282 84 TTTCATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 48601716 48601715 48601799 48601716 48601715 48601799 84 TTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTTTT ...x...:.::.xx......:.:.....x.x...xxxx.x:...:..........::.x........:.:x.:::::....... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 32992483 NA +3708 chr4 + 190214555 81594200 81594199 81594320 121 TTCATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTTTTTTTTTAGAGATGAGGTCTCACCATGTTGCC chr4 + 94230402 65924208 65924207 65924324 65924208 65924207 65924324 117 TTTATTTGCTCCTTATCTTTTCTGTGTGTTTTGCTGGTCTTTTTTTATTTTTATTTTTTGCTTTGATTTTTGATTTCTTACAGATTTCTTTTGTTTTT--------TGAAATCTTACCA-ATTGCC ..:....x......x:::.:...x:x......x:.xx.:.......x.....x......x:...xx.....xx...:..-----...:....x.....--------...::...:....-:..... 79M5I14M8D13M1D6M 82/112 73.2% 117/94230402 0.0% 14/112 12.5% 15669992 NA +3022 chr4 + 190214555 81594203 81594202 81594269 67 ATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 51335325 51335324 51335391 51335325 51335324 51335391 67 ATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTT ....:..xx......x.xx.:.:::..:.:.:...x......:.........::..:...::.:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 30258878 NA +3341 chr4 + 190214555 81594204 81594203 81594296 93 TTTTCTCCTTTCTCT--CTCTCCCTGTTTTTTTTTTTTTTTTTTTT--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 48601704 48601703 48601800 48601704 48601703 48601800 97 TTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTTTTA ......:.x.:..:.--:...:..x...:.:.....:::...x...--xx.x:...:..........::.x........:.:x.:::::........ 15M2I29M2I49M 64/93 68.8% 97/94230402 0.0% 4/93 4.3% 32992500 NA +3190 chr4 + 190214555 81594205 81594204 81594258 54 TTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59557954 59557953 59558007 59557954 59557953 59558007 54 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT ......x....:::.:......x........:....::x......:.....x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 22036251 NA +3066 chr4 + 190214555 81594213 81594212 81594301 89 TTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-------TTTTTTTTTTTTTAGAGAT chr4 + 94230402 72471345 72471344 72471440 72471345 72471344 72471440 96 TTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATAT ..:.:.....:x.x.x....:..:.xxx...:..x...x.:..::.::.....:....:........:..-------.:.....x.:x...x.x.. 70M7I19M 61/89 68.5% 96/94230402 0.0% 7/89 7.9% 9122868 NA +3054 chr4 + 190214555 81594213 81594212 81594294 82 TTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 68895481 68895480 68895562 68895481 68895480 68895562 82 TTCCCTTCAGCACTGTTTTTTTTTTTTTTTTTAATCTATTTCTGCTGTTTGATGCCCTGTTGTTTGTGTTTTTTTTTCTTCT ...:..::xx.x....................xx.:.x...:.x:.x...xx.x:::.x..x...x.x.........:..:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 12698732 NA +3021 chr4 + 190214555 81602197 81602196 81602246 50 GTTTTTGTTTGATTGGATCTCTTTTTTTTTTTTTTTTTTTTAACAGGGGA chr4 + 94230402 49716939 49716938 49716988 49716939 49716938 49716988 50 GCTTTTGTTTGATAGCATTTCACTTTTTTTTTTTTTTTTTTAAGGGAGAA .:...........x.x..:..x:....................x:.:.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 31885258 NA +3042 chr4 + 190214555 81613903 81613902 81613967 65 TATGCTCTTCTCTCTTCCAATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAACACA chr4 + 94230402 24125088 24125087 24125152 24125088 24125087 24125152 65 TATCCTCTCTTCCCACCTGGTCATTTGGAAAACAAACAAACAACAACAACAACAAAAAAAAAACA ...x....::..:.x:.:::.x.xxx::x..........................x.....x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 57488815 NA +3026 chr4 + 190214555 81613905 81613904 81613968 64 TGCTCTTCTCTCTTCCAATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAACACAG chr4 + 94230402 31697778 31697777 31697841 31697778 31697777 31697841 64 TACCCTCCCCTCCTCTAAAAAAAAAACAACCAAACAGTCAACAAAACCCCAAACCAAAAGACAG .:.:..:.:...:..:..x..........x......:x......x.x.xxx...x....x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 49916127 NA +3271 chr4 + 190214555 81613915 81613914 81613982 68 TCTTCCAATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAACACAGATC----CACCTCCTGGC chr4 + 94230402 4563802 4563801 4563873 4563802 4563801 4563873 72 TTTTCTAACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAACTCTGTACAGCTTTTGGC .:...:..:.......x...x.x.......:............x.....xx..:x..----..x..::.... 57M4I11M 53/68 77.9% 72/94230402 0.0% 4/68 5.9% 77050113 NA +3146 chr4 + 190214555 81622115 81622114 81622163 49 TTTAGGCTCTGAAATTAAAAAAAAAAAAAAAAAAGAAAGAA---AAAAAAAA chr4 + 94230402 69840821 69840820 69840872 69840821 69840820 69840872 52 TTTAAGATCTAAAATTAAAAAAAAAAACAACAAAGAAAGAACTCAAAAAAAA ....:.x...:................x..x..........---........ 41M3I8M 44/49 89.8% 52/94230402 0.0% 3/49 6.1% 11781294 NA +3123 chr4 + 190214555 81630054 81630053 81630126 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGAAGCAGAATCGCTTGAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........xxxxxx...x.:.........:.:..x:xx:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 5596849 NA +3057 chr4 + 190214555 81640852 81640851 81640890 39 AGGTAGGGAATATTATTCCCATTTTACAGATGGGAAAAT chr4 + 94230402 28016190 28016189 28016228 28016190 28016189 28016228 39 AGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAAT .....:.x.........................::.... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 53624662 NA +3550 chr4 + 190214555 81654419 81654418 81654486 68 TTTTCTTTTTTTTTGTTTTTT--TGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTGAGATGGAGTCT chr4 + 94230402 49679078 49679077 49679145 49679078 49679077 49679145 68 TTTTATTGCCTTTTGTTTTTCAAGGTTTTTTAGTTGTTGTTTTTTGTTTGTTTGTTTTAAA--GGAGTCT ....x..x::..........:--x.....x.x..........................:.:--....... 21M2I38M2D7M 56/66 84.8% 68/94230402 0.0% 4/66 6.1% 31975341 NA +3160 chr4 + 190214555 81654424 81654423 81654474 51 TTTTTTTTTGTTTTTTTGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT chr4 + 94230402 76208459 76208458 76208509 76208459 76208458 76208509 51 TTTTCTTTCCCTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTT ....:...:x:.x....x................x...........x:... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 5445965 NA +3224 chr4 + 190214555 81654424 81654423 81654477 54 TTTTTTTTTGTTTTTTTGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTGAG chr4 + 94230402 85943122 85943121 85943175 85943122 85943121 85943175 54 TTTATTTTTGTGGGTTTTTTTTGGTGCTGTTTGTTTTTGTTTGTTTGTTTTGAG ...x.......xxx...x.....x..:....xx..................... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% -4288698 -89941704 +3147 chr4 + 190214555 81654426 81654425 81654476 51 TTTTTTTGTTTTTTTGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTGA chr4 + 94230402 14999520 14999519 14999570 14999520 14999519 14999570 51 TTTATGTGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTTGA ...x.x..xx.....x.x...........:..x.................. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 66654906 NA +3006 chr4 + 190214555 81654436 81654435 81654482 47 TTTTTGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTGAGATGGA chr4 + 94230402 44116788 44116787 44116834 44116788 44116787 44116834 47 TTTTGGTTTTGGGGTTGTTTTTTTTTGTTTGTTTGTTTTTTGGTGGA ....x......xx......x...................xx.:.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 37537648 NA +3357 chr4 + 190214555 81655706 81655705 81655762 57 TTTTTTTTTTTTTGTTTTTTTTTTTGTTTGTTTGTTTGTTTTTGAGATGGAGTCTTG chr4 + 94230402 61024692 61024691 61024748 61024692 61024691 61024748 57 TTTTTTTTTTTTGGTATTGGTTTTTTTTTGTTTGTTTGTTTTTAAGAGGTAAACTTG ............x..x..xx.....x.................:...x.x.:x.... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 20631014 NA +3070 chr4 + 190214555 81655709 81655708 81655756 48 TTTTTTTTTTGTTTTTTTTTTTGTTTGTTTGTTTGTTTTTGAGATGGA chr4 + 94230402 14999530 14999529 14999577 14999530 14999529 14999577 48 TTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTTGAAGATTGA .......x.....x..x..x...................x:....x.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 66656179 NA +3085 chr4 + 190214555 81655709 81655708 81655753 45 TTTTTTTTTTGTTTTTTTTTTTGTTTGTTTGTTTGTTTTTGAGAT chr4 + 94230402 22701651 22701650 22701695 22701651 22701650 22701695 45 TTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAGGT ...:.x..x..x............................x..:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 58954058 NA +3349 chr4 + 190214555 81668619 81668618 81668679 61 TGAAACTCTGTCTTAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAATGTGGCCAGAATT chr4 + 94230402 22388885 22388884 22388945 22388885 22388884 22388945 61 TGTAACTCTGAGACAGAGAGAAAAAAAAAGAGAAAAAGAAGAAAGAAATGTGATTGGATTT ..x.......xxx:.:.:.:.........:..........:...........::::..x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 59279734 NA +3117 chr4 + 190214555 81669340 81669339 81669427 88 CTCTCCTTAAATGCTGCTTTCATTGAAAAGAAAAAGAAAAGGAAACAGGCACCAGGTTACAAGAGGTTAAGAAAAGGAAAAGGCAGCC chr4 + 94230402 14348895 14348894 14348982 14348895 14348894 14348982 88 CTCTCCTTAAACTGTACATTCATTTAAAAGAAAAAAAAAAAAAGAGGCATATCCCATCATAATGGTTTATGGTGATAAAAAGCCAGCC ...........:xx.:.x......x..........:....::.:.x:x::.:.xx:.:.:..x:.x...x.:x:.x:.....x..... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 67320445 NA +3578 chr4 + 190214555 81683327 81683326 81683407 81 ACTTTAGTAATATGTTTTTTGTTGTTGTTGTTGTGTGTGGTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTTGAGACAGTCT chr4 + 94230402 44216805 44216804 44216884 44216805 44216804 44216884 80 ATTTTGGTTAGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTCTTTCTGTACTTGTTGGTGTGTGTTGTTTTAGAT-CAGTCT .:...:..x.xx......................x.x.xx:...:...xx......x...x....x....x..x-...... 74M1D6M 62/80 77.5% 80/94230402 0.0% 1/80 1.2% 37466522 NA +3399 chr4 + 190214555 81683336 81683335 81683412 77 ATATGTTTTTTGTTGTTGTT---GTTGTGTGTGGTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTT------GAGACAGTCTTACTG chr4 + 94230402 81178881 81178880 81178966 81178881 81178880 81178966 86 ACACATTTTGTGTTTTCACTCAGGTTTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAGGATATAGTTTAATTG .:.::....x....x.:::.---...x..:..x...........................x....------..x.:...:.x.:.. 20M3I42M6I15M 60/77 77.9% 86/94230402 0.0% 9/77 11.7% 504455 NA +3180 chr4 + 190214555 81703005 81703004 81703080 76 CATATATATGTGTGTGAATGTATATATATACACACATATATA----TACACATATTATATACATATATACATAGTGCAAG chr4 + 94230402 37579519 37579518 37579598 37579519 37579518 37579598 80 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGTTAGTCTTAAACCTTTATAAAGCAAG ................x.........x..:.....::.....----.:..x..:...xx:x:.x.:x.x:...:x..... 42M4I34M 56/76 73.7% 80/94230402 0.0% 4/76 5.3% 44123486 NA +5136 chr4 + 190214555 81703007 81703006 81703139 133 TATATATGTGTGTGAATGTATATATATACACACATATATA-TACACATATTATATACATATATACATAGTGCAAGTATCTATCTCATACACACACACACACACACATATATATGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 44243186 44243185 44243309 44243186 44243185 44243309 124 tatatatat-----aatgtatatatatatata-atatataatatatataatgtgtgtgtgtgtatata-tatatatatatat---ataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATG .......:.-----..............:.:.-.......-..:.:...x.:.:.:::.:.:..:...-.::.x:...x...---.......x.............::.:.:.........x.....:.:.:.. 9M5D18M1D7M1I27M1D13M3D49M 95/123 77.2% 124/94230402 0.0% 11/123 8.9% 37459821 NA +5493 chr4 + 190214555 81703025 81703024 81703150 126 TATATATATACACACATATATATACACATATTATATACATATATACATAGTGCAAGTATCTATCT-------CATACACACACACACACACACATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTA chr4 + 94230402 44243186 44243185 44243314 44243186 44243185 44243314 129 tatatatata---atgtatatatatatataatatata-atatatataatgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGATTTA ..........---.::........:.:...x......-.......:.xx...::x..:.x...x.-------:...:.:.:.....x.......:.:.:.:..............x.....:.:.:..x.... 10M3D24M1D27M7I61M 94/122 77.0% 129/94230402 0.0% 11/122 9.0% 37459839 NA +3109 chr4 + 190214555 81706250 81706249 81706304 55 GCGACAGAGCAAGACTCCGTCTCAAAAAGAAAAAAAAAAAAAAAAAAAACACAAG chr4 + 94230402 88382708 88382707 88382762 88382708 88382707 88382762 55 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAG ..:.x:.........xx.x..........:.:..............:x.:.x... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -6676458 -87553944 +3089 chr4 + 190214555 81720786 81720785 81720824 39 AAAACAAAAACAACAACAAAAACAAACAAACAAAAAACC chr4 + 94230402 68134268 68134267 68134306 68134268 68134267 68134306 39 AAAAAAACAACAACAACAAAAACAAACAAACAAGAAACC ....x..x.........................:..... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 13586518 NA +3032 chr4 + 190214555 81737702 81737701 81737767 66 ATATTTCCCATTTTACAGATAAGGCAACTGAGGCACAGAGAGGTTAAGTAACTTGCTTATGGTCAC chr4 + 94230402 51253951 51253950 51254016 51253951 51253950 51254016 66 ATTTATCCCATTTTCCAGAAAAGGAAACAAAGGCCTCAAGAGGTGAAGTGACTTACACAGGATCAC ..x.x.........x....x....x...x:....x:x:......x....:....:.x:.x.:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 30483751 NA +3235 chr4 + 190214555 81744743 81744742 81744845 103 TTGGTCAATTC------CCTCTCCG-TGACTCAGTTTCCTTATCTGTAAAATAGGGATAATAATAAAGAGCTATTGTAAGGATGAACAAGTTAATTTTTGTAAAACACTT chr4 + 94230402 13242480 13242479 13242589 13242480 13242479 13242589 110 TTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTACCTACCTCGCAGGGGGGTTAGTTCATTCTTTACAAGCACTT ....x...x..------......::-..x..........::..................x..x..xxx.x...::x::x:.:x.:::x....x...:..xxx..:..... 11M6I8M1I84M 71/103 68.9% 110/94230402 0.0% 7/103 6.8% 68502263 NA +3261 chr4 + 190214555 81761796 81761795 81761874 79 GTGGTGGGCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGTGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:.........:..:........x.xx.x...x.:........::.:x.x:xx:..:..:.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 5728595 NA +3321 chr4 + 190214555 81763719 81763718 81763778 60 AAAACAACAACAACAACAAAAAAACAAACAAACAAAC--------AAAAAAAGCAGAGTG-----TTTCATTC chr4 + 94230402 71776054 71776053 71776126 71776054 71776053 71776126 73 AAAACAACAACAACAACAGAAAAACAACCAACCAAACAAACAACAAAAAAAATCAGACTGCAGCCTTTCATCC ..................:........x...x.....--------.......x....x..-----......:. 37M8I15M5I8M 54/60 90.0% 73/94230402 0.0% 13/60 21.7% 9987665 NA +3053 chr4 + 190214555 81780387 81780386 81780435 49 CCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAG chr4 + 94230402 60096764 60096763 60096812 60096764 60096763 60096812 49 CCTTAAAAAAAGAGAAAAAAATAACAAGAAAGAAGGGAGGCAGGAAAAG ...:.......:.:.......x..x.........:.:.:.x.:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 21683623 NA +3166 chr4 + 190214555 81788117 81788116 81788220 104 TCCTATTTGTGTGTATCTGTGTGTATATATATGTATATATACATATGTATGTATATATGTATGTATACATATGTATGTATATATGTATATATATGTATATGTAT chr4 + 94230402 85834530 85834529 85834615 85834530 85834529 85834615 86 TTTTATTCATTTGTGTCTGTGTGTGTGT------------------GTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .::....::.x...:.........:.:.------------------..:.....xx.....x.:...........x:..:..:.x...::.:.::..:.:::.. 28M18D58M 59/86 68.6% 86/94230402 0.0% 18/86 20.9% -4046413 -90183989 +3396 chr4 + 190214555 81788120 81788119 81788194 75 TATTTGTGTGTATCTGTGTGTATATATATGTATATATACATATGTATGTATATATGTATGTATACATATGTATGT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x.x.....:.x.......:...xx.....x::...........x:..:..:.x....:.:.....:::.::. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -4046421 -90183981 +3205 chr4 + 190214555 81788150 81788149 81788233 84 TATATATACATATGTATGTATATATGTATGTATACATATGTATGTATATATGTATATATATGTATATGTATATATGTATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x::.:.x.:...:.:.:...:.....xx..:.:x:::..:.......x...:....x....:.:.:..::.:.:... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -4046383 -90184019 +3101 chr4 + 190214555 81788154 81788153 81788222 69 TATACATATGTATGTATATATGTATGTATACATATGTATGTATATATGTATATATATGTATATGTATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:..x......:...x.:.x...x.....::........:..x.:.xx.x:...x..:......:.:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 11694012 NA +3040 chr4 + 190214555 81788202 81788201 81788316 115 TATATATATGTATATGTATATATGTATATATGTATATATACATATG------TATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATAT chr4 + 94230402 91738175 91738174 91738295 91738175 91738174 91738295 121 TATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ....x......x.x:x...:xxx.:.....x:...:.x.x.x.:..------...x.:.::........xx...x.x.x..x..::x.x...::..:.x.x......::..:x........ 46M6I69M 75/115 65.2% 121/94230402 0.0% 6/115 5.2% -9949973 -84280429 +3162 chr4 + 190214555 81788202 81788201 81788316 115 TATATATATGTATATGTATATATGTATATATGTATATATACATATG------TATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATAT chr4 + 94230402 91734577 91734576 91734697 91734577 91734576 91734697 121 TATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ....x......x.x:x...:xxx.:.....x:...:.x.x.x....------...x.:.::........xx...x.x.x..x..::x.x...::..:.x.x......::..:x........ 46M6I69M 76/115 66.1% 121/94230402 0.0% 6/115 5.2% -9946375 -84284027 +3047 chr4 + 190214555 81788225 81788224 81788344 120 GTATATATGTATATATACATATG----TATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATAT chr4 + 94230402 91738172 91738171 91738295 91738172 91738171 91738295 124 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x:...:.x.x.x....----:....:x....:.x.x:x.:.:x.xx.:...x.:.::........xx...x.x.x..x..::x.x...::..:.x.x......::..:x........ 23M4I97M 76/120 63.3% 124/94230402 0.0% 4/120 3.3% -9949947 -84280455 +3169 chr4 + 190214555 81788225 81788224 81788344 120 GTATATATGTATATATACATATG----TATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATATGTATATGTATATAT chr4 + 94230402 91734574 91734573 91734697 91734574 91734573 91734697 124 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x:...:.x.x.x....----:....:x....:.x.x:x...:x.xx.:...x.:.::........xx...x.x.x..x..::x.x...::..:.x.x......::..:x........ 23M4I97M 77/120 64.2% 124/94230402 0.0% 4/120 3.3% -9946349 -84284053 +3228 chr4 + 190214555 81788369 81788368 81788443 75 ATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACACACATAGACACACATATA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ....:..:....:.:.xx:x::..:..x..:.....:.x...::.:..........x:.:..::.x.......:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -7960281 -86270121 +3005 chr4 + 190214555 81788379 81788378 81788427 49 ATGTATATATACATATGTATATGTATATATGTATATATACACACACACA chr4 + 94230402 27759113 27759112 27759161 27759113 27759112 27759161 49 ATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA ..:.:...x....x.:::......:......:..:.......:...... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 54029266 NA +3179 chr4 + 190214555 81788393 81788392 81788450 58 ATGTATATGTATATATGTATATATACACACACACACATAGACACACATATATATATAC chr4 + 94230402 61270775 61270774 61270832 61270775 61270774 61270832 58 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTAC ...x....:.x.:...:...:....:..:...::...:......x...:....x:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 20517618 NA +3005 chr4 + 190214555 81789135 81789134 81789217 83 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGGGATTTATTT chr4 + 94230402 87420509 87420508 87420591 87420509 87420508 87420591 83 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAAAAATGTTGTAAGCAATTTAATT .:...........:.:........:.x:x.x.....:.:xx.x.........xx.x:.:.:...x:xx.x:..x:.....x.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -5631374 -88599028 +3097 chr4 + 190214555 81789137 81789136 81789200 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAGAAAGA chr4 + 94230402 87420509 87420508 87420572 87420509 87420508 87420572 64 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAAAAA .:...........:.:........:.x:x.x.....:.:xx...........xx.x:.:...:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -5631372 -88599030 +3180 chr4 + 190214555 81789139 81789138 81789202 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAGAAAGAGA chr4 + 94230402 87420509 87420508 87420572 87420509 87420508 87420572 64 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAAAAA .:...........:.:........:.x:x.x.....:::x............xx.x:...:.:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -5631370 -88599032 +3420 chr4 + 190214555 81834196 81834195 81834278 83 CATTGTGGTGGGCACCTGTAGTCCCAGCTACTCAGTAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x......--...x......:.........:::x........x.xx:x...x.:...........:..x:xx:..:..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 5800999 NA +3410 chr4 + 190214555 81844015 81844014 81844092 78 TGACGCATGGCTGTAATCCCAGCTACTCAAGAGGCTGAGGCACAAGAACCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:.--....:.:.........::.:........x.x::x...x...........:.:..x.xx:..:..:.. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 5810813 NA +3010 chr4 + 190214555 81851536 81851535 81851600 65 AAAAAGAAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ...:x...::..xx.x....:....::.:::::........:...:.:.........:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 52836863 NA +3307 chr4 + 190214555 81851542 81851541 81851639 98 AAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG .:......::.:xx.x...:.............:.:.x....:xxx....--::..x.:..x.x:..::.x:.......:...:::.:..:..::..x.. 50M2I48M 63/98 64.3% 100/94230402 0.0% 2/98 2.0% 30703163 NA +3141 chr4 + 190214555 81851566 81851565 81851630 65 AGAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA .:..x...::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 52836893 NA +3133 chr4 + 190214555 81851580 81851579 81851649 70 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACAAA chr4 + 94230402 75241507 75241506 75241576 75241507 75241506 75241576 70 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAA ...x..:..:x.:...xx.x...x.........:..:..........:...x.:::xx...:.:.:.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 6610073 NA +3168 chr4 + 190214555 81855442 81855441 81855486 45 TGGTTTTTGCTGTTGTTGTTGTTGATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42595721 42595720 42595765 42595721 42595720 42595765 45 TGGATTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT ...x....x:...........:..x:................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 39259721 NA +3236 chr4 + 190214555 81855445 81855444 81855492 48 TTTTTGCTGTTGTTGTTGTTGATTTTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 90203145 90203144 90203192 90203145 90203144 90203192 48 TTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATTAAGACA ......:.............x:x..............x.x..:..... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -8347700 -85882702 +3555 chr4 + 190214555 81873187 81873186 81873270 84 ACATGGTGACACATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::...:::..--.x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:...:. 13M2D69M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 5839991 NA +3072 chr4 + 190214555 81930650 81930649 81930695 46 TTACTTTGGGGGTTTTTGTTTGTTTGCTTGTTTTTGTGGTTTTTTT chr4 + 94230402 43031792 43031791 43031837 43031792 43031791 43031837 46 TTTCCTTGTGGTTTTTTGTTTGTTTGTTTATTTTTTTGGTTTTTTT ..x.:...x..x..............:..:.....x.......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 38898858 NA +3017 chr4 + 190214555 81942398 81942397 81942449 52 AACAAAACAAAGAGAGAGAGAGAAAGAAATCAATTTATAAATGGGGGAAAGA chr4 + 94230402 24148915 24148914 24148966 24148915 24148914 24148966 52 AAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAA ..x....x...:.............:......x.x.:.:.:...::....:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 57793483 NA +3367 chr4 + 190214555 81944567 81944566 81944609 43 TCCTTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTC-CTCTCTCTCTCTCTCTCTCACACACACACACACACa ......-...................x................ 6M1D36M 41/42 97.6% 42/94230402 0.0% 1/42 2.4% 6696520 NA +3646 chr4 + 190214555 81944570 81944569 81944630 61 TTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAG chr4 + 94230402 75248047 75248046 75248107 75248047 75248046 75248107 61 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagag .:..::....................................x.x.x.x.x.x.x.x.... 61M 50/61 82.0% 61/94230402 0.0% 0/61 0.0% 6696523 NA +3102 chr4 + 190214555 81944574 81944573 81944609 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 69343270 NA +3406 chr4 + 190214555 81944574 81944573 81944630 57 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAG chr4 + 94230402 75248049 75248048 75248105 75248049 75248048 75248105 57 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagag ..::.................x..................x.x.x.x.x.x.x.... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 6696525 NA +3226 chr4 + 190214555 81944576 81944575 81944630 55 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAGAG chr4 + 94230402 75248049 75248048 75248103 75248049 75248048 75248103 55 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagag ..::...............x.x..................x.x.x.x.x.x.... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 6696527 NA +3316 chr4 + 190214555 81944576 81944575 81944611 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 69343272 NA +3102 chr4 + 190214555 81944578 81944577 81944613 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 69343274 NA +3994 chr4 + 190214555 81951301 81951300 81951390 90 GACCTGGGGCAA----TTTAATCTCACTGTGCCTCAATTTTCCCATCTGTAAAATGAAGGAAATAGTAA-TGCCTAATATATAGGATTATTGTGA chr4 + 94230402 83501141 83501140 83501235 83501141 83501140 83501235 95 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA ...::x......----:....:..xxx.........:........:..........:..xx:.......-.:....x:x:.:...:x........ 12M4I53M1I25M 68/90 75.6% 95/94230402 0.0% 5/90 5.6% -1549840 -92680562 +3142 chr4 + 190214555 81958704 81958703 81958761 58 ATATATGCATGCGTATATATATATGTGTGTGTGTGTGTGTGTGTGTATGTATATTTTT chr4 + 94230402 6857610 6857609 6857667 6857610 6857609 6857667 58 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTT ......:.:.:.:..::....x..........x...........x.:x:x...x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 75101094 NA +3484 chr4 + 190214555 81962382 81962381 81962473 92 CCTGGCCCTATCTACAACTTACCATGG-GACCTTGGGCAAGTTATTTAATTTCTTTGTGCCTCAGTTTCCCATCTGTAAAATGGAAATAATAA chr4 + 94230402 87144280 87144279 87144371 87144280 87144279 87144371 92 CCTGGCTCTGT-TACAGATTTCCAGAATAACCACAAGCAAGTTGTGTAGTTTATCTGTGCCACTGTTCCCCATCTGTAAAGTCGGGAGGATAA ......:..:.-....:x..x...x::-:...x:::.......:.x..:...x.:......x.x...:............:.x.::.x:.... 11M1D15M1I65M 64/91 70.3% 92/94230402 0.0% 2/91 2.2% -5181898 -89048504 +3265 chr4 + 190214555 82006700 82006699 82006757 58 AACCTGAATGGTTTTTTGTTTTGTTTCTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGT chr4 + 94230402 84223586 84223585 84223643 84223586 84223585 84223643 58 AATCTGGATGGTTTTTTTTTTTGTTTGTTTGTTTTACCATTTTTATGTTTTCTTGTGT ..:...:..........x........x........:::x..x..x......x..x... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -2216886 -92013516 +3120 chr4 + 190214555 82006708 82006707 82006748 41 TGGTTTTTTGTTTTGTTTCTTTGTTTTGTTTTTGTTTTGTT chr4 + 94230402 37013835 37013834 37013875 37013835 37013834 37013875 41 TGATTCTTTTTTTTGTTTGTTTGTTTTGTTTTTGTTTTGTT ..:..:...x........x...................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 44992873 NA +3041 chr4 + 190214555 82015206 82015205 82015278 73 GAGAAAGAAGAGAAAGAAGACAGAAGAAGAATGAGAAGGAGGAAATGAAGGAAGAGAAGAAAAAGGAAGAAAA chr4 + 94230402 66803521 66803520 66803593 66803521 66803520 66803593 73 GATAAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAA ..x....x..........:.x.:........x:.:.......::xx.x...x.::..:::..x....x:x... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 15211685 NA +3139 chr4 + 190214555 82025756 82025755 82025825 70 ATTAGACCTAACCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 86518985 86518984 86519054 86518985 86518984 86519054 70 ATCAGACTGTAGTTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ..:....:xx.x:.:...:.:.:.:.:::..x....xx.:................:.....:.x:.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -4493229 -89737173 +3031 chr4 + 190214555 82025791 82025790 82025864 74 CTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACACAGGGTCTCTCTCACCCTGTTGC chr4 + 94230402 56907965 56907964 56908038 56907965 56907964 56908038 74 CTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTCACCTTATTAC .....:.:::::x.:..:.:.:.:.:..............:.....x.xx.x:.xx.:...:.....:.:..:. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 25117826 NA +3069 chr4 + 190214555 82044950 82044949 82045057 108 CCAAGGACCGGCATGGAGACTGAAACAGGTA-TGGCCCTGATGGCCCTGTTTTTTCTTCTTCTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTT chr4 + 94230402 56907919 56907918 56908026 56907919 56907918 56908026 108 CCTGAGACCAGCTCAGAGAGAGGGTCAGTCAGTGGTCAAGTCCACCCT-TTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTT ..x::....:..x::....xx.::x...x:.-...:.xx.x:x:....-..::.:..:.x......::..:.:..............:.....x.x:.x..xx.:.... 31M1I16M1D60M 69/107 64.5% 108/94230402 0.0% 2/107 1.9% 25137031 NA +3328 chr4 + 190214555 82044990 82044989 82045063 74 TGGCCCTGTTTTTTCTTCTTCTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTTACTGTT chr4 + 94230402 44980308 44980307 44980378 44980308 44980307 44980378 71 TGGCC---TTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAGATGTTTGCTGCT .....---..::..:.........:x...:..........:.........xx.::..:.:..x:x:..:...:. 5M3D66M 52/71 73.2% 71/94230402 0.0% 3/71 4.2% 37064682 NA +3062 chr4 + 190214555 82045007 82045006 82045047 41 CTTCTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 + 94230402 87791857 87791856 87791897 87791857 87791856 87791897 41 CTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGAC ..:....:...............::.....:.....:.... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -5746850 -88483552 +3010 chr4 + 190214555 82079834 82079833 82079923 90 CTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAACTAAATGGTTCTAGACCAGTGAAAATTGGAAAAGGCACACCTCCTCTGAAGGAGAAC chr4 + 94230402 63010449 63010448 63010538 63010449 63010448 63010538 90 CTTTGTTAAGTAAAAAAAACAAAAAAACAAAAAACAAAACGTAAACGACTCAAGGAAGTTGGAACAGTGACCCCTTCTCTAATGGAAGAC ..x.x.:..:x........x.......x.....x:...xx..xxxx...:x:x.:..:......x..xx..x...:....:.x...::.. 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 19069385 NA +3711 chr4 + 190214555 82083893 82083892 82083971 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAATCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::........x.xx.x...x.:......:.::.:..x:xx:.....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 6050692 NA +3300 chr4 + 190214555 82093498 82093497 82093575 78 GTGGTGGCACCTGTGATCCAAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-...x...::.:.x.........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 6M1D71M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 6060297 NA +3109 chr4 + 190214555 82103712 82103711 82103753 42 ATGTATATATGTATATGTATATATGTGTGTGTGTGTATATTT chr4 + 94230402 58110761 58110760 58110802 58110761 58110760 58110802 42 ATGTATTCATGGACATATATATATGTGTGTGTGTGTATATTT ......x:...x.:..:......................... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 23992951 NA +3479 chr4 + 190214555 82121177 82121176 82121273 97 GAGAAGAAAAAGAAAGAGGGGGTGAGAGGGAGGGAGGGGAGAGAAAGATAGAAATACAGATAGAAAGATGGATGGATGGAAGGAAAGAGAAAGGAAA chr4 + 94230402 32265570 32265569 32265662 32265570 32265569 32265662 93 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCA----GCTGATTTGAAACAGAGAAAAAGGAGA .::.:...:..:.:.....:.:x............:.:::..:..x:.....:.x....:.x::x.----.x..:x.x...:x.:...:......:. 66M4D27M 61/93 65.6% 93/94230402 0.0% 4/93 4.3% 49855607 NA +3277 chr4 + 190214555 82135942 82135941 82136024 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAGAAGAATCGCTTGAACCCGGGCGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::..:.....x.xx:x...x.:.........:.:x.x:xx:..:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 6102745 NA +3032 chr4 + 190214555 82145182 82145181 82145220 39 TTTTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTGAGATG chr4 + 94230402 73021718 73021717 73021756 73021718 73021717 73021756 39 TTTTTTGTTTGTTTGTTTTTTGTTTTTTGCTTAGAAGTG .............................:..x..::.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 9123464 NA +3601 chr4 + 190214555 82148244 82148243 82148302 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.............:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 6115038 NA +3389 chr4 + 190214555 82170034 82170033 82170125 92 CGTAGTGGTGTGCGCCTGTAGTTCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAATCCCAGAGGTGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033197 76033196 76033291 76033197 76033196 76033291 95 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG .::.......::..--................::.:........x.xx.x...x::......:..x::..x.xx:..:..:.----....-...... 14M2D66M4I4M1I6M 66/90 73.3% 95/94230402 0.0% 7/90 7.8% 6136837 NA +3327 chr4 + 190214555 82182589 82182588 82182667 79 ATATATGATATAATTTATGTATATACACACAAACACACACATATACATATATACACATGTATATACATATATATACACA chr4 + 94230402 56867285 56867284 56867363 56867285 56867284 56867363 79 ATATTTTATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ....x.x...:.xx..:...:.:x.:...:.x...:.:...:xx.:....x.:::............x:...:...... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 25315304 NA +3099 chr4 + 190214555 82182619 82182618 82182688 70 AAACACACACATATACATATATACACATGTATATACATATATATACACACACATGCATACATGCACACAC chr4 + 94230402 22600196 22600195 22600265 22600196 22600195 22600265 70 AGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCAC .:.......:..x:....::.x.......:...:.x.x....:..:.:x::::..::..:.....::... 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 59582423 NA +3249 chr4 + 190214555 82214772 82214771 82214862 91 TATATATCTATCTATATATATATATACACACACACACGCACACACACACACATATA-----CACACGCACATACATGTATATACACACACACATAC chr4 + 94230402 58675386 58675385 58675481 58675386 58675385 58675481 96 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAATTGTAAAGACAGAAAGACATAC ..:.:....x.x...::............x..:.:::..........x..x.....-----.x:.::.x:.x.xx....x.x...x.x.x...... 56M5I35M 64/91 70.3% 96/94230402 0.0% 5/91 5.5% 23539386 NA +3064 chr4 + 190214555 82214791 82214790 82214841 51 ATATATACACACACACACGCACACACACACACATATACACACGCACATACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .......:........x.x....:........:.:..:.:..:x..x.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 36073935 NA +3014 chr4 + 190214555 82214812 82214811 82214893 82 CACACACACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACACATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ..::..:..x:x.x....:.:...x.x.:.::.:...:..:...x.xx...x.:.:....:....:.::.....x...x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 5837955 NA +3099 chr4 + 190214555 82214818 82214817 82214905 88 CACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACACATACGCACACACACA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x..x:x:x...:....:.x:.:.::..x......:....:.x.x....:.....x.:.:.::::...:...::...::. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 59614637 NA +3196 chr4 + 190214555 82214861 82214860 82214930 70 ACATATATATATATATATATATATATACACATACGCACACACACATACATGCATATATACATATATATCT chr4 + 94230402 61270769 61270768 61270838 61270769 61270768 61270838 70 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCT ...xx:..:x......x.:.......::.:........::.....x...:x...:....x:..:.:.x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 20944092 NA +3364 chr4 + 190214555 82222587 82222586 82222683 97 ATATATATGTGTATATATATGTATA----TATAGATATATACATATATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATA chr4 + 94230402 74976143 74976142 74976234 74976143 74976142 74976234 92 atattCAAGTGTATACATGTTTACAGTCCTATGG---------TGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGTA ....x:.x.......:..:.x..:.----...:.---------.:..x....x................x.......x.:.x....:xx.....:.x.:.. 25M4I5M9D58M 67/88 76.1% 92/94230402 0.0% 13/88 14.8% 7246444 NA +3566 chr4 + 190214555 82222667 82222666 82222758 92 ATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATAT chr4 + 94230402 74976143 74976142 74976233 74976143 74976142 74976233 91 atattCAAGTGTATACATGTTTACAGTCCTATG-GTGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGT ....x::x.......:....x..:.xxxx...:-:::..x....x................x.......x.:.x.....xx.......x.:. 33M1D58M 66/91 72.5% 91/94230402 0.0% 1/91 1.1% 7246524 NA +3013 chr4 + 190214555 82222697 82222696 82222770 74 ATATACATATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATAGAT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT .:.:......x::::..::x.:.:...:...:.x.:....:..:..x.............:::.::.::..::. 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% 59622499 NA +3688 chr4 + 190214555 82222705 82222704 82222795 91 ATATGTGTGTGTATATATGTATATATAGATATA-TACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTATATATGTA chr4 + 94230402 74976143 74976142 74976234 74976143 74976142 74976234 92 atattCAAGTGTATACATGTTTACAGTCCTATGGTGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGTA ....x::x.......:....x..:.xxxx...:-.::.x....x................x.......x.:.x.....xx...:...x.... 33M1I58M 67/91 73.6% 92/94230402 0.0% 1/91 1.1% 7246562 NA +3477 chr4 + 190214555 82222741 82222740 82222828 88 ATATGTGTGTGTATATATGTATATATAGATATA---TACATATGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATAT chr4 + 94230402 74976143 74976142 74976233 74976143 74976142 74976233 91 atattCAAGTGTATACATGTTTACAGTCCTATGGTGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGT ....x::x.......:....x..:.xxxx...:---..x..:.x................x.......x.:.x.....xx.......x.:. 33M3I55M 65/88 73.9% 91/94230402 0.0% 3/88 3.4% 7246598 NA +3532 chr4 + 190214555 82222783 82222782 82222864 82 GTGTATATATGTATATATAGATATA-TACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATAT chr4 + 94230402 74976151 74976150 74976233 74976151 74976150 74976233 83 GTGTATACATGTTTACAGTCCTATGGTGTAAATGTCTGTGTATATATGTATAGATAGATAGACAGATATGGCTGTGTATTTGT .......:....x..:.xxxx...:-.::.x....x................x.......x.:.x.....xx.......x.:. 25M1I57M 62/82 75.6% 83/94230402 0.0% 1/82 1.2% 7246632 NA +3089 chr4 + 190214555 82222929 82222928 82222982 54 ATATATAAATACATACATATATATGTGTGTGTATATATGTATATATAGATATAA chr4 + 94230402 6857610 6857609 6857663 6857610 6857609 6857663 54 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAA .......x:.......:....x..........x.:.:...:.:.x.:..x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 75365319 NA +3591 chr4 + 190214555 82238668 82238667 82238741 74 GTGCACCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........x.::........x.xx.x...x.x...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 6205464 NA +3275 chr4 + 190214555 82240537 82240536 82240616 80 AAAGAAAGAGCAAGGGAGGG-------AGGGAGGAACGAAGGAAAGAAAGAAAGAGAGAAATGGAGGGAGGGAGGGAATGAAAGAAA chr4 + 94230402 66252359 66252358 66252445 66252359 66252358 66252445 87 AAAAAAAGAGGGTGGGGGGACAGTGAAAAAGTGGAACTAAACTTTAAAAGAAAAAAAGAAATGGGGGGCGGGGGGGAATAAAGGAAA ...:......x:x...:..:-------.::.x.....x..:xxxx:.......:.:........:...x...:......:..:.... 20M7I60M 57/80 71.2% 87/94230402 0.0% 7/80 8.8% 15988178 NA +3101 chr4 + 190214555 82240671 82240670 82240725 55 AAGGGAGGGAGAGAAAGAGAAAGAAGAAAGAAAGAAAAGACGAAAGAAGGAAAGA chr4 + 94230402 9535438 9535437 9535492 9535438 9535437 9535492 55 AGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA .::..........:x....:.........:x.........x:.xx:.......:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 72705233 NA +3054 chr4 + 190214555 82240683 82240682 82240762 80 GAAAGAGAAAGAAGAAAGAAAGAAAAGACGAAAGAAGGAAAGAAAGAGAGAAAGAAAGAACAAAAGAAAGAAAGAAAGAA chr4 + 94230402 48220515 48220514 48220594 48220515 48220514 48220594 80 GAAACATGAAGTAGAAAGAAGTAGAAAACGAAAATAGGAAAGGGAAACAAAAAGCGGAAGTAGGAGGAAATAAGCAGAAA ....x.x:...x........:x.:..:......:x.......::.:.x.:....x:::.::.::..:..:x...x.::.. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 34020168 NA +3163 chr4 + 190214555 82241040 82241039 82241135 96 TTAGTCTGGGCAACAGAAGCAAGATCCTGACTCTAAAAAAAAAAAAGAGGGAGAGAAAGAGAGGGAGAAATACAGAAAGAATAGAAAACTCTAGAA chr4 + 94230402 58530959 58530958 58531054 58530959 58530958 58531054 96 TCAGTCCAAGCACAACAAGAAATCTGCCGCCACTGGTACAAAGGAAGCAGGTGAAATAAAGAGGGAGAAAAACAGAAAGTAAATAAAACCAAAGAA .:....:::...xx.x...x..xx.x.:.x.x..::x.x...::...x:..x..:.x.:...........x........x.x.x.....:xx.... 96M 63/96 65.6% 96/94230402 0.0% 0/96 0.0% 23710081 NA +3009 chr4 + 190214555 82241074 82241073 82241124 51 AAAAAAAAAAAAGAGGGAGAGAAAGAGAGGGAGAAATACAGAAAGAATAGA chr4 + 94230402 44890394 44890393 44890444 44890394 44890393 44890444 51 AGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAA .::.........:.::......:.....:...........xx..:..x.:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 37350680 NA +3700 chr4 + 190214555 82244630 82244629 82244708 79 GTGGTGCATGACTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGAGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--......:...........::........x.xx.x...x.:.........:::..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 6211429 NA +3060 chr4 + 190214555 82270267 82270266 82270361 95 GCACTCCAGCCTGGGCGATAGAGTGAGACTTGGTCTCAAAAAAAAAAAAAAAAGAAAAGGAAGAAATTAAAAAAAAAATGTAATGTGCATCTTAA chr4 + 94230402 78317031 78317030 78317116 78317031 78317030 78317116 86 GCACTGAAACCTGGATAACAATGGAGGG---------AAAAAAAAGAAAGAGAGAAAAAGAAAAATGCACAAAGAAGGCTTGGTGTGCATCTTAA .....xx.:.....:::.:.:x.x::.:---------........:...:.:......:...:..xx:.x...:..:::x.::............ 28M9D58M 57/86 66.3% 86/94230402 0.0% 9/86 10.5% 3953236 NA +3060 chr4 + 190214555 82270267 82270266 82270361 95 GCACTCCAGCCTGGGCGATAGAGTGAGACTTGGTCTCAAAAAAAAAAAAAAAAGAAAAGGAAGAAATTAAAAAAAAAATGTAATGTGCATCTTAA chr4 + 94230402 78316164 78316163 78316249 78316164 78316163 78316249 86 GCACTGAAACCTGGATAACAATGGAGGG---------AAAAAAAAGAAAGAGAGAAAAAGAAAAATGCACAAAGAAGGCTTGGTGTGCATCTTAA .....xx.:.....:::.:.:x.x::.:---------........:...:.:......:...:..xx:.x...:..:::x.::............ 28M9D58M 57/86 66.3% 86/94230402 0.0% 9/86 10.5% 3954103 NA +3130 chr4 + 190214555 82304003 82304002 82304085 83 CATCATGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACTCAGGAAGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x:...::..:.--....:.:...........::........x.xx.x...x.x.......:...:.:x:xx:..:...:. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 6270806 NA +3025 chr4 + 190214555 82307841 82307840 82307875 35 TGTTTTTTTGTTTTTTGTTTTTTTGTTTTGTTTTT chr4 + 94230402 55056286 55056285 55056320 55056286 55056285 55056320 35 TGTTTTTTTGTTTTTTGGTTTTTTGTTTTGTTTTT .................x................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 27251555 NA +3642 chr4 + 190214555 82325524 82325523 82325593 70 AGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......-----.:.x......:...........::........x.xx.x...x.:...........:.. 7M5D58M 53/65 81.5% 65/94230402 0.0% 5/65 7.7% 6292324 NA +3084 chr4 + 190214555 82333367 82333366 82333437 71 CACTTGTAGTCCCAGCTACTTGAGAGGCTGAGGGGAGAGGATCCATTGAGCCCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:............:........xxxx.x.:.x.xx....:.....:.:x.xx:..:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 6300160 NA +4646 chr4 + 190214555 82335179 82335178 82335422 244 TCTCTGTTTCTT----CCTCTCTCTTTCTATGACTTTCTGTC---TCTTCCTTTCTTTCCTTCTCTTTGTCTCTCTGTTTCTTCCTCTCTCTGTCTTTCTATGACTTTCTGTCTCTTCCTCTCTTTCCTTCTCCCTTTGACTCTGTCTCTTCCTCTGTCTCTCTCTTTGACTCCTTGTCTCTGT-CTCTTCCTCTCTCTTTCTGTGACTTTCTGTCTCTTTCTCTCTTTCCTTTCTGCTGGT-------CTTTCCCTGC chr4 + 94230402 5346928 5346927 5347175 5346928 5346927 5347175 248 TCACTGTTTCCTGGAACCGGTCTCATTCTAGATTTTGATGCCAAGTCCTCTTTCACCTTCTTCTGTTTCTCTCTCTGTACACCCCTTGTTCTATAATTAGTTGAATTTCTGTCTCTGCTTCGCTTCCTC-----------CTTTGTCCTTTTCCCAGCTCTGCTCTTAGATCTCTCTCTTCTTTACTTTTGCTCTGCCCTCTCATGGCTGGATATTTATTTGCTTATTTTAATTTCTCTGGTGGGAAAGCCTTTCCTGC ..x.......:.----..xx....x.....x:x:..xx..:.---..:..:..:x::.:.....x...x.........x:x::...:x:...:.xx..xxx...x...........x.:..x...:.::-----------..:....::..:.:.x.::::x.....x..:::..:x::...x.-..:..x....x:.:.::::..:..xxx.:.:.x...x::.x...:xx..::x.....-------.:..:..... 12M4I26M3I84M11D44M1I57M7I10M 143/233 61.4% 248/94230402 0.0% 26/233 11.2% 76988251 NA +3679 chr4 + 190214555 82347818 82347817 82347878 61 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.........::::........x.xx.x...x...........:.:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 6314614 NA +3643 chr4 + 190214555 82349277 82349276 82349355 79 GTGGCGCATCCCTCTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...--.x.x....:...........::.:......x.xx.x...x.:...........:..x.xx...:..:.. 8M2D69M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 6316076 NA +3029 chr4 + 190214555 82349413 82349412 82349467 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAGGAAGGAAAAAAA chr4 + 94230402 1046819 1046818 1046873 1046819 1046818 1046873 55 AAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAA ...:.:.x.xx.......:......:........xx:.:......:..:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 81302594 NA +3576 chr4 + 190214555 82349413 82349412 82349490 78 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAGGAAGGAAAAAAACAATATTCTGCCAGCTGTCAGCA chr4 + 94230402 15856715 15856714 15856792 15856715 15856714 15856792 78 AGAAAAAGAAAAGAAAGAAAAACGAGACAGCACTGGAGGGAAAGAAGAAAAGAAACAATATCCTTTTATGTGTCAGCA .:.....:....:...:.....x:.:.x.:x.xx:..::...:....:...:.........:..x::.xx........ 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 66492698 NA +3775 chr4 + 190214555 82350358 82350357 82350431 74 GTGTACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..x......:........:..::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 6317154 NA +3374 chr4 + 190214555 82384547 82384546 82384628 82 GTGGTGGCACACACCTGTAGTCCCAACTACTCAGGAGGCTGAGGCAGGAGAACCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...:.....::::........x.xx.x...x.:...........:..x:xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 6351346 NA +3414 chr4 + 190214555 82387905 82387904 82387977 73 ACCAGACTCTGTCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAAAAAAAGAAATAAAAAGGAAAAA chr4 + 94230402 47268480 47268479 47268552 47268480 47268479 47268552 73 ATCACACCACTTCTCAAAAAAAAAAGCAACAAACCAAAACAATAAGAAAAAACAGAGAGGTAAAAAGGAAGAA .:..x..:x:x..............:x..x.:.xx:...x..x.........x.:...::..........:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 35119425 NA +3143 chr4 + 190214555 82398106 82398105 82398164 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGTACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x.:....x...::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 6364900 NA +3218 chr4 + 190214555 82400316 82400315 82400398 83 CATGGCGGCACATGCTGGTAGCTCCAGCTACTGGAGAGGCTGAGGTGGGAGGATGGCTTGAACCTAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:..::..:.:--....:..........x..:........x:xx.x.:.xx:........:..:..x.:x:.....:.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 6367119 NA +3850 chr4 + 190214555 82403192 82403191 82403322 131 GGAGGATAGGAGGGAGAAAACA---------------GGAAAAGAAAGTGA------GAAGAATCCAGACACAGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGGAGGATCGCTTAAGGCCAGGGGTTCGCGGCTGTAG chr4 + 94230402 76033128 76033127 76033277 76033128 76033127 76033277 150 GGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....::..:...x..x...x.---------------..:....x.x..:.------...:::x:x.x.........--.....x......:.........::::.......:x.xx.x.:.x.:...:.:x....::.:.:xx........ 22M15I14M6I20M2D73M 89/129 69.0% 150/94230402 0.0% 23/129 17.8% 6370064 NA +3599 chr4 + 190214555 82404581 82404580 82404666 86 TGGTGTGCTGTCATGCGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033192 76033191 76033277 76033192 76033191 76033277 86 TGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:::.x..x:...:.x...:..:.........::::........x:xx.x.:.x.......:.....:..x.xx:.....:.. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 6371389 NA +3031 chr4 + 190214555 82410474 82410473 82410543 70 TTCTTTTCTTTCTTTCTTTTGTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 58577649 58577648 58577718 58577649 58577648 58577718 70 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT .::....:....:::x.:x....:.:x:..x...:.x.x:........::..........x...x..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 23832825 NA +3139 chr4 + 190214555 82410498 82410497 82410565 68 TTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGATCTTGCTCTCTT chr4 + 94230402 32310636 32310635 32310703 32310636 32310635 32310703 68 TTCCTTTGATTCTATTTTTTTTTCCCTCCATTTTTCTTTTTCTTTTGGAGACATTTTTTTTTTCTCTT ..:....xx....x.........:::.::x.....:.....:....x......xxx.:..x:...... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 50099862 NA +3349 chr4 + 190214555 82421061 82421060 82421130 70 CATGGTGGCAGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::x.:.--....:.:...........::........:.xx.x...x.:.........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 6387864 NA +3553 chr4 + 190214555 82438512 82438511 82438595 84 ACATGGTGATGTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTAGAGACTGTGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::...--......x....:.:.........::::........x:xx.x.:.x.......:.....:..x.xx:.:....:. 8M2D74M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 6405316 NA +3131 chr4 + 190214555 82441772 82441771 82441833 62 TACAAAAACAACAACAACAACAACAAAAATAAATTTAAAAAACCAAAAAAGCCTAATGTATT chr4 + 94230402 73664717 73664716 73664778 73664717 73664716 73664778 62 TATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAACCCACAAAGATAAATGAATT ..:....:x......:.............x...xxx........x.x....x:x....x... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 8777055 NA +3096 chr4 + 190214555 82448918 82448917 82448987 70 CGTAGTGGCCGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:--..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 6415721 NA +3394 chr4 + 190214555 82455657 82455656 82455715 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:...........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 6422451 NA +3005 chr4 + 190214555 82466202 82466201 82466288 87 GCCATTTTGCTATTTGATTTCTATATATATATATATGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCT chr4 + 94230402 47077426 47077425 47077512 47077426 47077425 47077512 87 GTCACATTGTTAATTGTAATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTTGGTAGTGTGTCCCTCT .:..:x...:..x...xxx.x....:......x.x.x.::...x:x...:.xx...................:x.xx.x...:.x.. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 35388776 NA +3012 chr4 + 190214555 82475337 82475336 82475388 52 GGAAGGAGAGAGAGAGAGACAGAGAGGAGAGAGAGAGAAAAAAAGAGAGATT chr4 + 94230402 2605166 2605165 2605217 2605166 2605165 2605217 52 GAAAGGAAAAAGTGAGATGGAGAGAGGGGGGAGGGAAAAAAAAAGAAAAATT .:.....:.:..x....x:x.......:.:...:..:.........:.:... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 79870171 NA +3463 chr4 + 190214555 82490569 82490568 82490656 88 TGGTTTTTTTTGTTTGTTTGTTTTTGTTTTGGTTTGTTTGTTTGT----------TTTGAGACAGGG-------TCTTTACTCTGTCTCCCAGGCTAAA-ATACAG chr4 + 94230402 90070610 90070609 90070714 90070610 90070609 90070714 105 TGGGTTTTTTTGTTTGTTTATTTTTGTTTTGGTTT-TTTGTTTTTCCTGTAGAACTTTGAGCCATGGAATAAATTCCTTTCTATTACTCTCAAGCAAAACATGCAG ...x...............:...............-.......x.----------......x..x..-------..:..x..x.xx...:..:..x...-..:... 35M1D9M10I12M7I25M1I6M 73/87 83.9% 105/94230402 0.0% 19/87 21.8% -7580041 -86650361 +3052 chr4 + 190214555 82492112 82492111 82492146 35 TGTTTTTTGTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 + 94230402 76208470 76208469 76208504 76208470 76208469 76208504 35 TGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT ........x.......................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 6283642 NA +3044 chr4 + 190214555 82492114 82492113 82492147 34 TTTTTTGTTGTTGTTGTTGTTGTTTGTTTGTTTG chr4 + 94230402 14999531 14999530 14999564 14999531 14999530 14999564 34 TTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTG ..................:............... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 67492583 NA +3058 chr4 + 190214555 82504901 82504900 82504959 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x......:..:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 6471695 NA +3109 chr4 + 190214555 82505635 82505634 82505691 57 CATGTTATTGAGCAGCAATCGCAGGAGACTAAAGATGAATGTTCTGTAAAACAATGC chr4 + 94230402 51253702 51253701 51253758 51253702 51253701 51253758 57 CATGTGCTGCAGCAGAAATTGCAGGAGACAAAAGATGTATTTTCTGGAAAGCAACGC .....xx.xx.....x...:.........x.......x..x.....x...:...:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 31251933 NA +3350 chr4 + 190214555 82507681 82507680 82507761 81 TTGCAA---AGGATAAACAATATATTAAATTAACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 12818494 12818493 12818571 12818494 12818493 12818571 78 TTGCAATCCAGGATATATAA------AAATAAATTCTCTCTCTCTTTTTCTTTTTCAATTTCTTTCCTCTTTTTGCTTATTTTT ......---......x.:..------....x..:...........:.:.......:xx...:...::.:.....x:..x..... 6M3I11M6D58M 59/75 78.7% 78/94230402 0.0% 9/75 12.0% 69689187 NA +3001 chr4 + 190214555 82507702 82507701 82507758 57 TTAAATTAACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907954 56907953 56908010 56907954 56907953 56908010 57 TCAAGTCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT .:..:.:x..:..:..:::...:x....:.:.:.:.:..............:..... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 25599748 NA +3059 chr4 + 190214555 82507722 82507721 82507776 55 TCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACACGAT chr4 + 94230402 66958937 66958936 66958991 66958937 66958936 66958991 55 TCTCTCTTTTGTTTTTTTTTTCTTTCTCATTACTTTTGTTTCTTTCAGAAATGAT ..........x..........:...:.:x..x:....x...:...x...x.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 15548785 NA +3725 chr4 + 190214555 82510139 82510138 82510221 83 CATGGTGGCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 6476942 NA +3576 chr4 + 190214555 82515597 82515596 82515679 83 CATGGTGGCACGCGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--.:..:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 6482400 NA +3409 chr4 + 190214555 82536224 82536223 82536287 64 GTCATGCACCTGTAGTCCCAGCTACTCAGCAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x:.....x......:.........:::x........x.xx.x...x.:.........:.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 6503023 NA +3032 chr4 + 190214555 82559554 82559553 82559602 49 CAAAAACAAACAAACAAAAAAAGTAGGGACACACTTATTACACACCTGT chr4 + 94230402 26426488 26426487 26426536 26426488 26426487 26426536 49 CAGAAACAAACAAACAAAAAAAATGGGAGCACATTTAAGATACATTTGT ..:...................:.:..::....:...xx.:...::... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 56133066 NA +3334 chr4 + 190214555 82573765 82573764 82573838 74 GAGAAGCTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030056 90030055 90030129 90030056 90030055 90030129 74 GAATAGTTGACAGATAACTGAAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ..:x..:....xx.x..xx:...x.......xxx:...::..............:.:.:............x.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -7456291 -86774111 +3289 chr4 + 190214555 82573766 82573765 82573844 79 AGAAGCTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1494977 1494976 1495055 1494977 1494976 1495055 79 AGAAGCCACATGGAGATTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ......::xx.x:.:.xxx.:::...x.:.........x.:....x..........:.:..:...:.....x....::. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 81078789 NA +3068 chr4 + 190214555 82573783 82573782 82573838 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 81078783 NA +3282 chr4 + 190214555 82573785 82573784 82573840 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 81078785 NA +3014 chr4 + 190214555 82573787 82573786 82573845 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 31101297 NA +3496 chr4 + 190214555 82573787 82573786 82573842 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 81078787 NA +3014 chr4 + 190214555 82573791 82573790 82573849 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 31101301 NA +3118 chr4 + 190214555 82573800 82573799 82573866 67 AAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 58988593 58988592 58988659 58988593 58988592 58988659 67 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATG ......:...x............:.:.:..:......x.:..:.x.xx...x::..x....xx.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 23585207 NA +3402 chr4 + 190214555 82573802 82573801 82573890 89 AAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGACAACCTATTATTCTGGTTGTC chr4 + 94230402 58988593 58988592 58988679 58988593 58988592 58988679 87 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATGACAAAT--TTATTCTTACTGTC ......:..xx............:.:.:..:......x.:..:.x.xx...x::..x....xx.:......x:--.......x::.... 73M2D14M 62/87 71.3% 87/94230402 0.0% 2/87 2.3% 23585209 NA +3133 chr4 + 190214555 82575074 82575073 82575154 81 TTTTTATAATTTTGTTTTCAGATTGTTTGTTGCTAGTGTATAGAAACACAATTCAATTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 37575392 37575391 37575472 37575392 37575391 37575472 81 TTATTATTATCTTGTTTTCAGATTATTTGTTCCTGCTTGATGAAAAGGTGGTTGGTGGTTGTGTTTTTGTTTTTTTTTTAA ..x....x..:.............:......x..:x.xx..::...x::::..x:xxx..x.x.....x..........:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 44999682 NA +3146 chr4 + 190214555 82580454 82580453 82580543 90 TCTCT-CTGATGATGTCAATAAGAATATCAATCACAATGAACGTCCCTGTCCGGCCAATTCCAGCACTGCAGTGCACCAAGACCGGCCCTG chr4 + 94230402 47260506 47260505 47260596 47260506 47260505 47260596 91 TCTCTGCTGATGAGCCCCAGAACTACGTCGATACAAATCAGGGTCCCTGAGCGGCCAATGCCCGCACTGCAGTGCGTTACGATGGGTCCCG .....-.......xx:.x.x..xx.::..:..xxx...x.:x.......xx........x..x............:::.x..:x..:..:. 5M1I85M 62/90 68.9% 91/94230402 0.0% 1/90 1.1% 35319948 NA +3332 chr4 + 190214555 82592780 82592779 82592864 85 GAAGAAAGAAAAAGAAAGAGAGGAAGAGAGAAAGAGAGAAAGAAAGGAAGGAAGGAAAGA-----------AGGAAGAAAAGAAGGAAAGAAGGAA chr4 + 94230402 61683535 61683534 61683630 61683535 61683534 61683630 96 GAAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAA ...:..:...:..:.x.:.:....x.x.::.....:.....:x..:.........:.x.:-----------.......x.xx.....:x.:..:.. 60M11I25M 60/85 70.6% 96/94230402 0.0% 11/85 12.9% 20909245 NA +4193 chr4 + 190214555 82592793 82592792 82592903 111 GAAAGAGAGGAAGAGAGAAAGAGAGAAAGAAAGGAAGGAAGGAAAGAAGGAAGAAAAGAA---------------------GGAAAGAAGGAAGGAAGGAGAGAGAAAGAAAGAGAGAAAAGAGTAAAAGAA chr4 + 94230402 1500702 1500701 1500833 1500702 1500701 1500833 132 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaa .:......:...::.x.:::.::....:x:.:..:.:.:......:..:x.:......:.---------------------....x:..........::x.::.:...:.....:......x:.x..x.... 60M21I51M 75/111 67.6% 132/94230402 0.0% 21/111 18.9% 81092091 NA +4412 chr4 + 190214555 82592799 82592798 82592938 140 GAGGAAGAGAGAAAGAGAGAAAGAAAGGAAGGAAGGAAAGAAGGAAGAAAAGAAGGAAAGAAGGAAGGAAGGA------GAGAGAAAGAAAGAGAGAAAAGAGTAAAAGAAAGACCAAATTAAGAAAGATGCCCATAGCAGGAGAA chr4 + 94230402 1500700 1500699 1500839 1500700 1500699 1500839 140 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaa------gaaagaaaatggaaatagaagaggaa .:........::..::.x.:::.:...:.:x..:..:...:.....:....x.:.:....:..:..x:::..:------...:.:..x....::..:...:x.x....:...:.------x..::..:...xxx....x..::... 73M6I35M6D26M 86/134 64.2% 140/94230402 0.0% 12/134 9.0% 81092099 NA +3073 chr4 + 190214555 82619889 82619888 82619977 89 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGGAGAGGAGGGGAGAGGAGGGAAGGGGGAAAGGTAGGAGACA chr4 + 94230402 1053162 1053161 1053250 1053162 1053161 1053250 89 GGAGGGGAACGAGATCATGGAAAGAAGAGAGATAGAAAGATAGAAATCCAGAGGAAGGGGGAGAGGGGCAAAGACATGGGAAGGAGACA .:::.:..:x....xx:x.::.:::.......x...:...x....:xxx......:...:...::...x.::.:x.x:..x........ 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% 81566727 NA +3118 chr4 + 190214555 82623804 82623803 82623866 63 CTTGAGCCTCTTCCCTGCTTTTCTTTTTCTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTG chr4 + 94230402 90152623 90152622 90152685 90152623 90152622 90152685 63 CTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ........x:.:::.:x:..:..:...:..x.............x...x.:.:.:.....x.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -7528819 -86701583 +3459 chr4 + 190214555 82625946 82625945 82626018 73 TGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGTGGGAGGATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........x.::........x:xx.x.:.x::...........:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 6592741 NA +3278 chr4 + 190214555 82641231 82641230 82641293 63 GCGAAGAAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGTGAATAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ..:...:.....:..xx.x.........::.:..............:x.x.....xxx..... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -5741477 -88488925 +3032 chr4 + 190214555 82662720 82662719 82662789 70 CATGGTGATGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::...:..x::.--....:.:...........::........x.xx.x...x.x........::.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 6629523 NA +3187 chr4 + 190214555 82664962 82664961 82665034 73 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATGTATAATACACACA chr4 + 94230402 4618346 4618345 4618418 4618346 4618345 4618418 73 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ...:...:x:x.::.x.......::..............::x...::......x.x...:..xx...x.:.:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 78046616 NA +3208 chr4 + 190214555 82664962 82664961 82665036 75 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATGTATAATACACACACA chr4 + 94230402 4618344 4618343 4618418 4618344 4618343 4618418 75 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA .:...:...:x:x.::.x.......::............x.::x...::......x.x.:....:..:.x.:.:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 78046618 NA +3098 chr4 + 190214555 82664969 82664968 82665025 57 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATGTATA chr4 + 94230402 4618357 4618356 4618412 4618357 4618356 4618412 56 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATA .::.x.......::..............x:....::......x.x......-..... 51M1D5M 45/56 80.4% 56/94230402 0.0% 1/56 1.8% 78046612 NA +3053 chr4 + 190214555 82665033 82665032 82665081 49 CACACACACACACATATATACACACACACATATATATATATATATTTTT chr4 + 94230402 74526077 74526076 74526125 74526077 74526076 74526125 49 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ...............:x.:.:.....x.:.....::.......:.x... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 8138956 NA +3092 chr4 + 190214555 82665035 82665034 82665083 49 CACACACACACATATATACACACACACATATATATATATATATTTTTTT chr4 + 94230402 74526077 74526076 74526125 74526077 74526076 74526125 49 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ............:..:x...:.....x.......::.......x.x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 8138958 NA +3362 chr4 + 190214555 82679194 82679193 82679303 110 ATCTCCAAAAAA-----AAAAAAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAAGAAA chr4 + 94230402 78003575 78003574 78003689 78003575 78003574 78003689 115 ACCTCTGAAAGATATTGAAAAATGAAATCAGAGCAGCAAAAATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAAGTAAAAAACAGGGAAGGAATGAAACAGGAGAA .:...::...:.-----.....x:..:xx...:x..x..:..x.xx.:.......:.x.:...:...:...x:...xxx.x...x..:...x.:........x....x.::::.. 12M5I98M 72/110 65.5% 115/94230402 0.0% 5/110 4.5% 4675619 NA +3038 chr4 + 190214555 82687157 82687156 82687221 65 TAAGACCTTGTT---ACAAGAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAA chr4 + 94230402 44890376 44890375 44890443 44890376 44890375 44890443 68 TAATACCTCTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAA ...x....:x..---.....:.............:...:...:....:..:..:x.x:xx.:...... 12M3I53M 49/65 75.4% 68/94230402 0.0% 3/65 4.6% 37796781 NA +4443 chr4 + 190214555 82696534 82696533 82696731 198 AATAACATTTCTGATTGGTACTAAATTAGGAGGTGCTGCAGACATCATTGAGGAAAGAGGAATAAC----ACAGATGGATCCAAAGAGGTTAGAAATATGAATAGAAATTATCACAATGAGATTTGATTTCAGAAAAATGCAAATGAAGGCAGC-TGGGGGAGAAAT--CA--TCCAAAATGCAATATAATCAGTGGGTTGGGAAAC chr4 + 94230402 76523549 76523548 76523750 76523549 76523548 76523750 202 AATACAATTTGCAGATGATGCCAAATTAAGAGGGATCATAAACACAGTGGAAGGCAGAGGGAGAGAGATAACAAAAGGATGTTGAGAGTTTAAAGAACTGTGCAAAAATTAACAAGATGAGATTTAATTTAGATAAAATACAAGGTCATACACCATGGGAGAAAAATACCAACTACAAAATGGAAGAT-----GCTGGTTAGAAAAC ....xx....x:::x..:.:.:......:....x:::::.:...:x:.x..:.:x.....:.x.:x----...:.x....x:x:....x...:.:.xx..x::.:......x..x:.........:....x::x.....:...:xxx.x:..x.-....:..:....--..--.x.......x..x..-----.:x....:.:.... 66M4I84M1I12M2I2M2I15M5D14M 124/193 64.2% 202/94230402 0.0% 14/193 7.3% 6172985 NA +3004 chr4 + 190214555 82700782 82700781 82700848 67 GTCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACATTCTCAGACAAACCAAAAT chr4 + 94230402 167269 167268 167335 167269 167268 167335 67 GTATCTCAAGTAGAAAAAGAATGTAACAAAAAAAGAATAAGAACAACATTCACACCCAAACCAAAAT ..x...x..:x.:.....:..x:x..x.......:..x..:..x:......x..xx........... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 82533513 NA +3312 chr4 + 190214555 82712240 82712239 82712322 83 TAACATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATTTTTATT----------TTATTTTTTTTTT chr4 + 94230402 7572253 7572252 7572345 7572253 7572252 7572345 93 TAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATATTTCAGTAGTGTTTAGGCAAAACTTATTTTTTTCCT .........x.:..:.:...:.x.x.x:...x:..x....:.....:....x........:.x.xx.:..----------..........::. 70M10I13M 61/83 73.5% 93/94230402 0.0% 10/83 12.0% 75139987 NA +3117 chr4 + 190214555 82712255 82712254 82712337 83 TATATATATATATATATATATATATATATATATATATATATATTTTATTTTTATTTTATTTTTTTTTTTTGAGATGAAGTCTC chr4 + 94230402 65285586 65285585 65285668 65285586 65285585 65285668 83 TATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCTACTCATCTTGAAACTAGTTTTC ...x..:.......:....x.........x.:.:.:.x....xxx.:..x.......x.:.x:.:x.:....:.:x.:x.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 17426669 NA +3759 chr4 + 190214555 82715101 82715100 82715197 97 GTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGCACTAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....::....--....:.:...........::........x.x:.x...x::...........:..x:xx:..:..:..------..x..x...... 10M2D67M6D12M 66/89 74.2% 89/94230402 0.0% 8/89 9.0% 6681900 NA +3707 chr4 + 190214555 82755360 82755359 82755442 83 CATGGTGGCACACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCATTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--....:.............::........x.xx.x...x..:.......::.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 6722163 NA +3438 chr4 + 190214555 82763375 82763374 82763453 79 GTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATCACTTGAATCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........::::.....:..x.xx.x...x........:..:.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 6730174 NA +3581 chr4 + 190214555 82775717 82775716 82775799 83 CATGGTAGCACATGCCTGTAGTCCCAGCTACTCAGGAGACTGAGGCTGGTGGATCACTTGAGCCTGGGAGGTTGAGGCTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:.::..:.--......:.........::::..:.....x.:x...:.x.......:..::.:..x..x:.....::. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 6742520 NA +3264 chr4 + 190214555 82781285 82781284 82781358 74 GTGCTCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x......:.........x.::........x.xx.x...xx:.........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 6748081 NA +3249 chr4 + 190214555 82783663 82783662 82783745 83 CGTGGCAGCGCATGCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCGCTTGAACCTAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.::.:...:.--....:.:...........:x........x.xx.x...x.:........:..:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 6750466 NA +3868 chr4 + 190214555 82786652 82786651 82786734 83 CATGGTGGTGCATGTCTGTAGTCCCAGTTACTGGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:..--.....:....:....x.::........x.xx.x...x.:..............x:xx:..:..:.. 15M2D66M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 6753455 NA +3036 chr4 + 190214555 82789931 82789930 82789971 41 TAGGGGTTTTTTGTTGTTGTTGTTGTTAGTGTATTTGTTTG chr4 + 94230402 68761440 68761439 68761480 68761440 68761439 68761480 41 TGGGGTTTTTTTGTTGTTGTTGTTGTTAATATATTTTTTTG .:...x......................:.:.....x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 14028491 NA +3134 chr4 + 190214555 82789933 82789932 82789984 52 GGGGTTTTTTGTTGTTGTTGTTGTTAGTGTATTTGTTTGTTAGTAATTTTTC chr4 + 94230402 74136536 74136535 74136587 74136536 74136535 74136587 52 GGGGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTC ................:........:.xx.x..........x..xxx..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 8653397 NA +3695 chr4 + 190214555 82791108 82791107 82791180 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 6757903 NA +3373 chr4 + 190214555 82795686 82795685 82795764 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGCGGTGGGAGCATTGCTTGAGCCCAGGAGACTGAGACTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::......x.x:xx.x.x.x::.....:.....:..x:.x:.:...:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 6762485 NA +3202 chr4 + 190214555 82800779 82800778 82800848 70 CTGTTCTATCTTGAATCCATCTTTTGTTTGTTTGTTTGTTTTTGTTTTT------GAGACGGAGTCTCGCTCTGTT chr4 + 94230402 41855246 41855245 41855321 41855246 41855245 41855321 76 CTGTTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTGGTGGGGAGAGGAGGTTGTGTTTTGTT .....:...:...::x.:x.:...................x..x.....------....x.::..:x:.:.:.... 49M6I21M 52/70 74.3% 76/94230402 0.0% 6/70 8.6% 40945533 NA +3494 chr4 + 190214555 82806467 82806466 82806539 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACCTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x:xx.x.:.x...:...:..::.:..x.:x:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 6773262 NA +3259 chr4 + 190214555 82811722 82811721 82811764 43 TAAAATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792622 24792621 24792664 24792622 24792621 24792664 43 TAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...:...................x:........x......... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 58019100 NA +3002 chr4 + 190214555 82811725 82811724 82811766 42 AATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 24792623 24792622 24792664 24792623 24792622 24792664 42 AAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ..x...................xx........x......... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 58019102 NA +3725 chr4 + 190214555 82835656 82835655 82835737 82 GTGGTGGCACACACATGTAGTTCCAGCTACTTGGGATGCTGAGGCATGAGAATTGCTTGAACCTAGGAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...:..................::.x......x.x..x...x::........:..:..x:xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 6802455 NA +3360 chr4 + 190214555 82836233 82836232 82836315 83 CGTGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--......:...........::...x....x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 6803036 NA +3004 chr4 + 190214555 82836375 82836374 82836424 50 AAAAAAAAAAAAAAAAAAGAAAAAGAATTAACAGCAAGGACTCAAACAGA chr4 + 94230402 42663013 42663012 42663062 42663013 42663012 42663062 50 AAAAGAAAAAAGCAAAAAAAAAAAGAATCAACAGAAAGAATGTAAACAAA ....:......:x.....:.........:.....x...:.:x:.....:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 40173362 NA +3356 chr4 + 190214555 82841407 82841406 82841483 77 AATGAGACTCCATCTCAAAAAAGAAAAAAAAAATTTTATATATATATATATATATATATATACACACACACTAAAAA chr4 + 94230402 74671040 74671039 74671112 74671040 74671039 74671112 73 agtgtgaacccaccacaAGAATATACAAAAA----TTAGCTGTATATATATATATATACACACACACACACAAAAAA .:..x..x:...:.x...:..x:x.x.....----...xx.:................:.:..........x..... 31M4D42M 56/73 76.7% 73/94230402 0.0% 4/73 5.5% 8170367 NA +3319 chr4 + 190214555 82841420 82841419 82841472 53 CTCAAAAAAGAAAAAAAAAATTTTATATATATATATATATATATATATACACA chr4 + 94230402 34623051 34623050 34623103 34623051 34623050 34623103 53 CTTTAAAAAAAAAAAACAGATTTTCTATATATATTGATATATGTATATACACA ..:x.....:......x.:.....x.........xx......:.......... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 48218369 NA +3595 chr4 + 190214555 82854223 82854222 82854305 83 CATGGTGGTGCATGCCTATAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACGCAGGGGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--.:..:.:...........::...:....x.xx.x...x.........x...::.x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 6821026 NA +3857 chr4 + 190214555 82856611 82856610 82856693 83 CATGGTGGCGGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x...--....:.:...........::........x:xx.x...x.:..............x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 6823414 NA +3712 chr4 + 190214555 82858406 82858405 82858486 81 CAGTGGTGTGCACCTGTAGCCCCACCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--...x.....::...x.....:.::........x.xx.x...x.............:..x:xx:..:..:.. 8M2D71M 59/79 74.7% 79/94230402 0.0% 2/79 2.5% 6825207 NA +3098 chr4 + 190214555 82871699 82871698 82871781 83 CATGGTGGCTTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::........x.xx.x...x.::.......::.:..x:xx:..:..:.. 8M2D73M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 6838502 NA +3474 chr4 + 190214555 82880458 82880457 82880531 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCACAAGAATTGCTTGAGCCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x.x::x...x::.....:..::....x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 6847254 NA +3039 chr4 + 190214555 82881599 82881598 82881660 62 ATGCCATCTATTGTGCTTAATACTGGAGGAATAAAGATAAAATACAATTCCTGTGAAGGAAA chr4 + 94230402 60307246 60307245 60307307 60307246 60307245 60307307 62 ATAACATCCATTCTGCTTATTAGTTGAGGCATAAATGTTAAATACAATCACTGCCAAGGAAA ..:x....:...x......x..x.x....x.....x:.x.........:x...:x....... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 22574353 NA +3232 chr4 + 190214555 82902055 82902054 82902126 72 TCAAAACTAGTTATGC------------TAGTTAGATT-ACAATATTTCCCAACATTTTCCTTCTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 52482980 52482979 52483064 52482980 52482979 52483064 85 TCAAAAATAGTTCTGTCCCTGTGAGCAATATTTCAATTGACAACATTTCAAAACATATTCCTGCTTTTTTTTTTTTTTTTTTGTG ......x.....x..:------------..x..x:...-....:.....xx.....x.....x...................x.. 16M12I10M1I46M 60/72 83.3% 85/94230402 0.0% 13/72 18.1% 30419075 NA +3303 chr4 + 190214555 82927007 82927006 82927076 70 CATGGTGGCATGCACCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x......:........x:.::........x.xx.x...x.:........::.:.. 8M2D60M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 6893810 NA +3111 chr4 + 190214555 82942860 82942859 82942909 50 GCACACACACACACACACACACACACACACACACCCTCCCTCCCTCCCTG chr4 + 94230402 1607789 1607788 1607838 1607789 1607788 1607838 50 GCAGGAACAAACACCCGCACACACACACACACACCTTCCCATCCTTCCTG ...x:x...x....x.:..................:....x:...:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 81335071 NA +3019 chr4 + 190214555 82949364 82949363 82949427 64 CTACTATTAAGCTGTATGAGTTCTTTTGTTGTTGTTGTTGTTGTTGTTGTTGAGATGGAGTTTC chr4 + 94230402 3774043 3774042 3774106 3774043 3774042 3774106 64 CTCCTGGAAAACTTTGTGCTTTTTTTTGTTGTTGTTGTTGTTGTAGTTTTTTAAATGGAACATC ..x..:xx..:..x.:..xx..:.....................x...x..x.:.....::x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 79175321 NA +3302 chr4 + 190214555 82974081 82974080 82974139 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 6940875 NA +3710 chr4 + 190214555 82974609 82974608 82974679 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAAGCAAGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::.......:x.xx.x...x................x:xx:..:..:.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 6941402 NA +3246 chr4 + 190214555 82986564 82986563 82986633 70 CATGGTGGCATGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x.:....:.........::::........x.xx:x...x..........::.:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 6953367 NA +3600 chr4 + 190214555 82991006 82991005 82991107 102 CATGAAGAAGTCAGGTGCAATGGCGTGCACCTGTAGTCCCAGCTATTCAGGAGGATGAGATGGGAGGATCGCTTGAGGCCAGAAGTTCAAGGCTGCAGTGCA chr4 + 94230402 76033182 76033181 76033281 76033182 76033181 76033281 100 CATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA ......::::.x.x:::..:...--.....x......:.......:.::::...x....x:xx.x.:.x.:.....:x.......:.:x:.....:..x:.. 23M2D77M 65/100 65.0% 100/94230402 0.0% 2/100 2.0% 6957824 NA +3728 chr4 + 190214555 82997854 82997853 82997936 83 CATGGTGGTGCGCTCCTATAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......:.x--.:..:.:............:........x.xx.x...x.........:...:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 6964657 NA +3155 chr4 + 190214555 83001419 83001418 83001492 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTCAGGTGGAAGGATCACTTGAGCCCAGGAGGTCAAGGATGCGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::.....x..x:xx:x.:.x.......:.....:..x.:x:..x..::. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 6968215 NA +3221 chr4 + 190214555 83001924 83001923 83002008 85 AGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGATCTTGGAGAA--ATTCAAGAGCTAA chr4 + 94230402 86438911 86438910 86438997 86438911 86438910 86438997 87 AGGGTGGGAGAGAGAGAAAGTAATGGGAAAAGATGGAACGAAACGAGACAGGAGGGGAGAGATGGTGGGGAAAGACTCAAGTGCTGA ....x....::..::...:.x.:x::.:..:..x....x...:x:..:x....:.....:...xx...:...--.:.....x...:. 72M2I13M 57/85 67.1% 87/94230402 0.0% 2/85 2.4% -3436987 -90793415 +3363 chr4 + 190214555 83004259 83004258 83004341 83 AGTGGTGGTGGGCACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----...x......:........:..::........x.xx.x:..x.:........::.:..x:xx:..:..:.. 7M5D71M 56/78 71.8% 78/94230402 0.0% 5/78 6.4% 6971059 NA +3130 chr4 + 190214555 83006319 83006318 83006378 60 TGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGGACCTGGCAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x......:.........:.::........x.xx.x...x.:....:...::.x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 6973114 NA +3875 chr4 + 190214555 83007000 83006999 83007082 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGAGAGGCCGAGGCAAGAGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........:..:....:...x.xx.x...x.:.........:.:..x.xx:.....:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 6973803 NA +3335 chr4 + 190214555 83014718 83014717 83014777 60 TGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x......:........:::::........x.xx.x...x...........:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 6981513 NA +3260 chr4 + 190214555 83018299 83018298 83018392 94 CATGGTGGCACATGCCTAAAGTCCTAGCTACTTGGGAGGCTGAGGTGAGAGGATCACTTGAGCCCAGGAGTTCAAGGTTACAGCGAGGCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGAT ..::....::..:.--.:x...:.:.........::........x:xx.x.:.x.......:.....:..:.:x:..:.::..---::...... 14M2D67M3D8M 60/89 67.4% 89/94230402 0.0% 5/89 5.6% 6985102 NA +3171 chr4 + 190214555 83020741 83020740 83020795 55 AAGAACATAGCACTGAATAGAAATATGATGTCCTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 79275857 79275856 79275911 79275857 79275856 79275911 55 AAGGATTTCACACTAAGCATAAAAATGATTTCCTTTTTTTTTTTTTTTTTTTCTG ...:.:x.x:....:.::.x...x.....x......................:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 3744884 NA +3078 chr4 + 190214555 83026076 83026075 83026165 90 TTGTCCCTGTTAACAAGTCTTTTTATTTTTAGCATTTCCTTTTTACATTTTCTTTTCATTTCTGCCCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 29935313 29935312 29935402 29935313 29935312 29935402 90 TTTTCTCTGCTAACAGTTATTGTTTCAATTAGCCTTTGCTTTTTCAGAGTAGTTTTAGTTTGCTTTCTCTTTTGCTTTTTTTTTTTTTTT ..x..:...:.....:x.x..x..x:xx.....x...x......xx:xx.xx....x:...x:x::.......x:............... 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% 53090763 NA +3104 chr4 + 190214555 83026107 83026106 83026181 75 GCATTTCCTTTTTACATTTTCTTTTCATTTCTGCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 27283384 27283383 27283458 27283384 27283383 27283458 75 GCTTTTTCTTTCAAAAGTCCTATTTCACTATTCTCCTCTTTTTTTTCTTTCTTTTTTTTGTATTTCATTTTGCTT ..x...:....:x.x.x.:::x.....:.x:.x:............:...:........x.x...:x....x:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 55742723 NA +3014 chr4 + 190214555 83026129 83026128 83026182 54 TTTCATTTCTGCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507630 80507629 80507683 80507630 80507629 80507683 54 TTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT ...x......:.:::..:...x:.x..::..............x.:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 2518499 NA +3921 chr4 + 190214555 83027383 83027382 83027456 74 GTGTGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGTGGGAGGACTGCTTGAGCCCAGAAGTTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........:.........x:xx.x.:.x::.....:........:.:x:.....:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 6994179 NA +3013 chr4 + 190214555 83038585 83038584 83038658 74 TGATTTCTCTCTCCTAAAAATTATATTAGCACTTACCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 53858816 53858815 53858889 53858816 53858815 53858889 74 TAATCTATTTCTCTGATAATTTAGAATAATGGTGAGGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTT .:..:.x.:....:x.x..x...x.x..:::x.x.xx...x.....................x.x....x.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 29179769 NA +3129 chr4 + 190214555 83038600 83038599 83038659 60 AAAAATTATAT---TAGCACTTA-CCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTG chr4 + 94230402 23572632 23572631 23572695 23572632 23572631 23572695 64 aaaaaaTATATATATATAATTTAACCTTCTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTG .....x.....---..xx.:...-...x:.x...........................x..... 11M3I9M1I40M 52/60 86.7% 64/94230402 0.0% 4/60 6.7% 59465968 NA +3476 chr4 + 190214555 83038621 83038620 83038661 41 CTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGAG chr4 + 94230402 12568756 12568755 12568796 12568756 12568755 12568796 41 CTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTAAG .................................x....:.. 41M 39/41 95.1% 41/94230402 0.0% 0/41 0.0% 70469865 NA +3286 chr4 + 190214555 83038623 83038622 83038677 55 GTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGAGATGGAGTTTCACTCTT chr4 + 94230402 88153964 88153963 88154016 88153964 88153963 88154016 53 GTTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTTTAAGAAG--GTTTCAGTCTT .....................x.x.......x....:...x.--......x.... 42M2D11M 47/53 88.7% 53/94230402 0.0% 2/53 3.8% -5115341 -89115061 +3117 chr4 + 190214555 83038624 83038623 83038658 35 TTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 55690048 55690047 55690082 55690048 55690047 55690082 35 TTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT .............:..................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 27348576 NA +3086 chr4 + 190214555 83038626 83038625 83038669 44 TTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGAGATGGAGTT chr4 + 94230402 81099540 81099539 81099583 81099540 81099539 81099583 44 TTTTTTGTTTGTTTTTCTGTTTTGTTTTGTTTTTGGATGAATTT ..............x.:................x:....:.x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 1939086 NA +3033 chr4 + 190214555 83038627 83038626 83038664 38 TTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGAGATG chr4 + 94230402 45081602 45081601 45081639 45081602 45081601 45081639 38 TTTTTGTTTGTTTGTTTGTTTTGTTTTATTTTGGAGTG ...........................:.....:::.. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 37957025 NA +3033 chr4 + 190214555 83050279 83050278 83050317 39 GATACTCTTGTTGTTGTTGTTGTTGTTGTTGTTTTTTGT chr4 + 94230402 44383943 44383942 44383981 44383943 44383942 44383981 39 GATCCTCTTGGTGTTGTTTTTGTTGTTGTTGTTTTTTGT ...x......x.......x.................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 38666336 NA +3391 chr4 + 190214555 83051124 83051123 83051201 78 CATGATGGCACATGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCGGGAGGATCGCTTGAGCCCAGGAGTTTGAGAC chr4 + 94230402 76033197 76033196 76033272 76033197 76033196 76033272 76 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ..:::...::..:.--......:.:.........::........x.xx.x.:.x.:.....:.....:..:..x:.:. 14M2D62M 53/76 69.7% 76/94230402 0.0% 2/76 2.6% 7017927 NA +3186 chr4 + 190214555 83060904 83060903 83060963 60 TGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x....:.:.:.........::........x.xx.x...x..:........:.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 7027699 NA +3304 chr4 + 190214555 83067521 83067520 83067629 109 GCCCTTTTTTTTTTTTTTTTTTTTAAAGAAACAGGGTCTTGCTATGTTGCCCAGGCTAGTCTTGAACTCCTGGTCCCAAGTGATCCTCCTGCTTCGGCCTCCCAAAGTG chr4 + 94230402 57916781 57916780 57916886 57916781 57916780 57916886 106 GCTTTTTTTTTTTCTTTTTTTTTTAAATAGAGATGCTCTTCCTATGCTGCCAAGTC---ATTTGAAATTCTCTTTCAAATTGTATGTGTTATTTCTTCCTTTTAATGTG ..::.........:.............x.:.x.x.x....x.....:....x..x.---x:.....x.:..xx.:.x..x..xx:x.x:.::...xx...:::..x... 56M3D50M 71/106 67.0% 106/94230402 0.0% 3/106 2.8% 25150740 NA +3348 chr4 + 190214555 83068841 83068840 83068899 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTAAACCTAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.....:....:..:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 7035635 NA +3259 chr4 + 190214555 83079207 83079206 83079289 83 CATGGTGGCGGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAATCCTGGGGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x.:.--....:.:...........::........x.xx.x...x:.......:..x.::.x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 7046010 NA +3028 chr4 + 190214555 83088692 83088691 83088753 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAGAAAGAAAAAGAAAAAGAAA chr4 + 94230402 86089086 86089085 86089147 86089086 86089085 86089147 62 AGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGA .:..:::.....:x:x.:::..............:....:::...x...x......:...:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -3000394 -91230008 +3123 chr4 + 190214555 83088695 83088694 83088767 73 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAGAAAGAAAAAGAAAAAGAAAAGAACAAAAAATTC chr4 + 94230402 54037031 54037030 54037103 54037031 54037030 54037103 73 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAACTC .::.....:................:x:..::x:::::..x..:.:.x...:.:........xx...x..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 29051664 NA +3020 chr4 + 190214555 83088697 83088696 83088764 68 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAGAAAGAAAAAGAAAAAGAAAAGAACAAAAAA chr4 + 94230402 42663013 42663012 42663080 42663013 42663012 42663080 68 AAAAGAAAAAAGCAAAAAAAAAAAGAATCAACAGAAAGAATGTAAACAAAGAACTTGAGAGTAGATAA ....:......:x...........:..xx...........x.x...x:..:..xxx:...::.:.x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 40425684 NA +3039 chr4 + 190214555 83092776 83092775 83092849 74 GAAGCAACATTTCATTTCTTTTCTTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGCTGGAGT chr4 + 94230402 73765942 73765941 73766015 73765942 73765941 73766015 74 GAAGTTTCATTTTGTTTGTTTTCTTTCTTCTATGCATTTCTTTTTTTTTTTTTAATTAGAAACATGCTAGAAGT ....:xx.....::...x........:.::.x.x.x...:.............xx..x..:...x.x:x.:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 9326834 NA +3099 chr4 + 190214555 83100152 83100151 83100223 72 GCTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x......:...........::........x.xx.x...xx:.x.........:..x.xx:.x:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 7066946 NA +3611 chr4 + 190214555 83112174 83112173 83112248 75 AAAAAAAAAAAAATTTATATATATATATATGTATATATATATATGTATATAT---ATATATATATATGTATCAGCTGT chr4 + 94230402 85548422 85548421 85548499 85548422 85548421 85548499 78 AAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTTAGTTGT ...........:.x......:...:.:.:..:...:........:.x.....---.:..:x....x::.x.:..:... 52M3I23M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% -2436248 -91794154 +3257 chr4 + 190214555 83117599 83117598 83117670 72 GCACCTGTAGTCCCAGCTACTCGGGGAGCTGAGGCAGGAGACTTGCTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::::......x.xx.x..xx::.........:....x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 7084393 NA +4099 chr4 + 190214555 83118259 83118258 83118375 117 GAGACCTGTTTCTACAAAAAATATAGTAGC---------TGA-GCATGGTGGTGCACACTTGTGGTCCCAGCTACGTGGGAGGCTGAGGCAGGAGGATCACTTGAGCTCAGGAGCTCAAGGCTGCAG chr4 + 94230402 76033153 76033152 76033277 76033153 76033152 76033277 125 GGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:......x..:x:x...:x..:..:.:x.---------...-:..::.........:--...:..:........x..::........x.xx.x.:.x.......:.:...:....:x:.....:.. 30M9I3M1I15M2D67M 81/115 70.4% 125/94230402 0.0% 12/115 10.4% 7085106 NA +3199 chr4 + 190214555 83119764 83119763 83119809 46 CCTTCCCTTTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTCTGA chr4 + 94230402 44980311 44980310 44980356 44980311 44980310 44980356 46 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAA ......:...:.......:x.:............:.......:.:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 38139453 NA +3470 chr4 + 190214555 83125974 83125973 83126045 72 AGTGGTGGCACACTCATGTAATCCTAGCTACTTGGAAGGCTGAGGCAGGAGAATGGCTTGAACCCGGAAGCT chr4 + 94230402 76033200 76033199 76033266 76033200 76033199 76033266 67 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .......-----.x.:....:.:.:.........:.........x.xx.x...xx:.........:...... 7M5D60M 53/67 79.1% 67/94230402 0.0% 5/67 7.5% 7092774 NA +5928 chr4 + 190214555 83128395 83128394 83128547 153 CTCTTTTGTACTTTCTCTCTCCTTGCTTCC-TCCTTCCTTCCCCTTTCCCTTTCTC--------TTCCCTTCCCCTTCCCCTTCCCCTTCC--------CTGCCCCTTCCCCTTCCCTTCCCCTTTCCCGTTCCCTTTC----TCTT------TCCCTTTCCCTTTTCCTTTCATTTTTT chr4 + 94230402 1114873 1114872 1115052 1114873 1114872 1115052 180 cccttccatttcttccctcttctcccttccctttttcctttccctcttcctttctcgcttcccatttcccttctcttcccttTTCTCTTACTATGTTCGCTGGCCCTTTTCCTTCCCTTTCCCTTTCCAATTTCCCTTCAACATCTCCTTACATCTCCTTCCTTTTTCCCCTTACCATTT .:...:::.x::...:....:..:x.....-.::......:....:.:........--------..:..:.:.:......:..:.:...x.--------...x.....::.........:........x:..:..:...----...:------..:.:....:......::.:.::x... 30M1I25M8I27M8I40M4I4M6I27M 111/153 72.5% 180/94230402 0.0% 27/153 17.6% 82013522 NA +5544 chr4 + 190214555 83128397 83128396 83128545 149 CTTTTGTACTTTCTCTCTCCTT-----GCTTCCTCCTTCCTTCCCCTTTCCCTTTCTCTTCC--------CTTCCCCTTCCCCTTCCCCTTCCCTGCCC-CTTCCCCTTC-----------------CCTTCCCCTTTCCCGT------------TCCCTTTCTCTTTCCCTTTCCCTTTTCCTTTCATTTT chr4 + 94230402 1114902 1114901 1115092 1114902 1114901 1115092 191 cctttttcctttccctcttcctttctcgcttcccatttcccttctcttcccttTTCTCTTACTATGTTCGCTGGCCCTTTTCCTTCCCTTTCCCTTTCCAATTTCCCTTCAACATCTCCTTACATCTCCTTCCTTTTTCCCCTTACCATTTCTcctccctttctcattccc-ttccctctccctttcctttt .:...x.x.....:....:.:.-----......:x:....:.:.:...:..:........x.--------..xx.....::.......:......x:..-x..:......-----------------......::......x.------------..........x.....-......:.:......x.... 22M5I35M8I29M1I10M17I16M12I16M1D20M 117/148 79.1% 191/94230402 0.0% 44/148 29.7% 82013495 NA +3458 chr4 + 190214555 83128438 83128437 83128571 134 TTTCCCTTTCTCTTCCCTTCCCCTTCCCCTTCCCCTTCCCTGCCCCTTCCCCTTCC----------------CTTCCCCTTTCCCGTTCCCTTTCTCTTTCCCTTTCCCTTTTCCTTTCATTTTTTGAGACAAGGTCTCACTCTGTTGCC chr4 + 94230402 46440847 46440846 46440992 46440847 46440846 46440992 146 TTTTCATTACTCTCAGTTTATCCTTTCTCTTTTT-TTCCTTGCTCCCACTTGCACTGGAAACCTATGTGGTTCTATCCTGTTAACATTTTCTTCCCCTTCCCCTTTCCCTTTTCCTTTCTTTTTCTCAGATAAA---CCACTTTGAAGCC ...:.x..x....:xx:..x:....:.:...:::-....:...:..:x.::x:x.:----------------..x:..:x..xx.:..::...:.:...:...................x....:.x...:..:---:....:..xx... 34M1D21M16I62M3D13M 85/130 65.4% 146/94230402 0.0% 20/130 15.4% 36687591 NA +3067 chr4 + 190214555 83130007 83130006 83130065 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 7096801 NA +4287 chr4 + 190214555 83138477 83138476 83138559 83 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAGCCCAGGAGTTTGAGGCTGCAGTAAACTATGC chr4 + 94230402 76033205 76033204 76033287 76033205 76033204 76033287 83 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGC .....x......:...........::........x.xx:x...x::.....:.....:..:..x:.....:..x.x.:x.... 83M 61/83 73.5% 83/94230402 0.0% 0/83 0.0% 7105272 NA +3093 chr4 + 190214555 83141038 83141037 83141109 72 GCACTTATAGTCCCAGCTACTGGGGAGGATGAGGCAGGAGAATCACTTGAACCTGGCAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:.........x.::...x....x.xx.x...x..........::.x..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 7107832 NA +3558 chr4 + 190214555 83200528 83200527 83200598 71 CACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCATGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.........::::.......:x.x..x...x...........:.:..x:xx:..:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 7167321 NA +3032 chr4 + 190214555 83214905 83214904 83214972 68 GCTTAAACTTCACGAGCCTCACTTCTCTCATCTACAAAATGCAGATAGTA----ATACCTAGTGAGGCTTCA chr4 + 94230402 86370205 86370204 86370276 86370205 86370204 86370276 72 GCTTTATCTTCCCGAGCCTCACTTTTCTTGTCTACAAAGCACAGGCAGTGCCACAAACCCAGCTCAGCTCCA ....x.x....x............:...::........:::...::...:----.x...:..:xx:...:.. 50M4I18M 49/68 72.1% 72/94230402 0.0% 4/68 5.9% -3155300 -91075102 +3155 chr4 + 190214555 83219096 83219095 83219170 75 AGGAAATCCATTTAAGAAAAAAATAGAAAGTTGATTTTCAGAATAGGGCTTTCTTCTTTCCCTCCTCCTCCTCCT chr4 + 94230402 66831797 66831796 66831871 66831797 66831796 66831871 75 AGAATTTCCATTTAAAAAAAAAATAATGATCTCTCTTTCAGAATAAGTACTCTTCCTTCCCTTCCCCCTCATACT ..:.xx.........:.........:x:.x:.xx:..........:.xx:.::.:...:..:...:....x.x.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 16387299 NA +3003 chr4 + 190214555 83220227 83220226 83220262 36 TTTTTTGTTTTGTTTTGTTTTTTGTTTGTTTGTTTT chr4 + 94230402 7924226 7924225 7924261 7924226 7924225 7924261 36 TTTTTTGTTTTGTTTTGCTGTTTGTTTGTTTGTTTT .................:.x................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 75296001 NA +3064 chr4 + 190214555 83233967 83233966 83234011 45 GTTTTTGGTTTTTGGTTTGTTTGTTTTTTTGTTTTTTTTGAGACA chr4 + 94230402 28795520 28795519 28795564 28795520 28795519 28795564 45 GTTACTGGTTTTTTGTTTGTTTGTTTTTCTGCTCTTTTTGTGACA ...x:........x..............:..:.:......x.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 54438447 NA +3021 chr4 + 190214555 83254666 83254665 83254724 59 GTGGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAGGTTGGG chr4 + 94230402 76033212 76033211 76033270 76033212 76033211 76033270 59 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG ..:..:...........::........x.xx:x...x.:........::.:..x..x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 7221454 NA +3176 chr4 + 190214555 83257237 83257236 83257310 74 TTTTCACTGTACCTTTTCTGTGTTTCTTTCTTTTTTTTTTTTTTTAGACAAGTTCTCACTCTGTTGCCCAAACT chr4 + 94230402 54484362 54484361 54484435 54484362 54484361 54484435 74 TTTCCTTCATATTATTTCTGTAGTTCTTTTTTTTTTTCTTTTTTTAAACAAACTGCATTTCTGTAGTTCAATCT ...:.x:::..::x.......:x......:.......:........:....::.x:xx:.....x.::...x.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 28772875 NA +6228 chr4 + 190214555 83264211 83264210 83264383 173 TTTATTCTCTATACCCTTCTTTGTTTTGTCTGTCTTCTTTTCTTTCCACAAATTCCCAAGGACAATCCCTAAAAAAACTATTAGTCCCAGTGTTCGGTTGGAGATAAATTTATTCCAACAATCCTCAGGTCTGTGGATGTCTAGAGTGTAAATCTGCAAGAGAGGAATACAAA chr4 + 94230402 47891860 47891859 47892032 47891860 47891859 47892032 173 TCTGCTTTCTAAAGGCTCTTCTACAGTTTCAGAGTTTTTCCTTTTCCAGAGATTTCCAAGCACGATCCCTACGAAGAGTAGAACTCCTACAGTACGATTTGAAGCGAACTTCTTCCAACAGTCTTCAGGCTTATCTATATCCAAAGTGTAAATCTGCAAAAGCACAGTATAAA .:.::.:....x.xx..::.:.::xx.x..x.xx..:..:::......x.:...:.....x..:.......x:..:.x..xx.x...:.xx..x..:..x..::::..:..x........:..:.....::.:.xx..:..:.:...............:..x:x.:..:... 173M 111/173 64.2% 173/94230402 0.0% 0/173 0.0% 35372351 NA +5960 chr4 + 190214555 83272027 83272026 83272182 156 CTCCATAAAAGTGTAGTTTGCAAATATCAAAGGAAATACTTTTAGTTATTGTAAGCTCACCCAAGGCTAGTTGAGGCCAGTATGAAATTCTTTTCATTAGTGGGTAGGTGATGACAAGAAGTAAGGATCCTGCTCCCAGAGCTATACTGAAAAGAG chr4 + 94230402 47896158 47896157 47896304 47896158 47896157 47896304 147 CTCCCCAAAAGC-TAGATCACAAGGATGGAACTGAAAAC--------ATTTCCAACTCACCCAAAACTAACTGTGGCCAATATGTTATTCTCTTCATCAGAGGGTAGGTGACCACAAGAGACAAGGAGGCTGCTCCCAGGATGATACTGTAAAAAG ....x:.....:-...x.::...:x..x:..xx:..x..--------...x:x.:.........::...::..x.....:....xx.....:.....:..x..........:x......:::.....xx..........:::x......x...:.. 12M1D26M8D109M 105/147 71.4% 147/94230402 0.0% 9/147 6.1% 35375869 NA +3269 chr4 + 190214555 83272483 83272482 83272544 62 AGGTATTATAATATAAAGTTTTATTCTCTTCCTTTTTTGCAGATGGGAAAACTGAAGCACAA chr4 + 94230402 33470341 33470340 33470402 33470341 33470340 33470402 62 AGGTGTCATGAAGTGAATTTGTATTCTGCTTTCTTTTGGCAGATGGAAAAACTGAAGCAGAA ....:.:..:.x:.:..x..x......x:.:::....x........:............x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 49802142 NA +7606 chr4 + 190214555 83273494 83273493 83273662 169 ACCTGTAGTAATTTAGACACAGAAGAACACCCAGTGCCAGGGTTAGCTGTCCCCCAAGAAAAACAAAGGACTGAAAAGTTGAAATGTCTCCAGCGGCTATTGGACGATTGGCTGTTCTTGTAACCTTAAAACATAAAAACAGATACCTTAGCTTCATGTAATGACTCAA chr4 + 94230402 47896507 47896506 47896662 47896507 47896506 47896662 156 ACCTGTAGTAATTCAGACACAGAAGCACACAGAGAGCCAGGCTGAGCTGTCCACCAAGGAAAACGAAGGACTGAAAAGTGGAGATTTCTCCAGCTGCCAGGGGTCTTCCTGCTGTCCTTGCGACCT--AAACGTGGAAAGAA-----------TCATGTTAATACTCAA .............:...........x....xx..x......x.x........x.....:.....:..............x..:..x........x..:.xx..x.xx::x.....:....::....--....:.::...x.:-----------......x.xx...... 126M2D14M11D16M 122/156 78.2% 156/94230402 0.0% 13/156 8.3% 35376987 NA +3106 chr4 + 190214555 83279557 83279556 83279618 62 TGTTTATTGTGTGTTTATATGTGTATATAAATATATATATATATACGTACCTACATATAAAA chr4 + 94230402 6083165 6083164 6083226 6083165 6083164 6083226 62 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAA .:.x...x......x.:.:..:.:...:.x.x.:...........::.x.:.....:..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 77196392 NA +3059 chr4 + 190214555 83299343 83299342 83299415 73 AACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAGAAAATGTCTACAGAGG chr4 + 94230402 18047932 18047931 18048004 18047932 18047931 18048004 73 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCTAAGG ......:::.xx..:.x...:............x........xx:....x..x.:.:...:::.x.:.x:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 65251411 NA +3096 chr4 + 190214555 83300675 83300674 83300744 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 7267478 NA +3112 chr4 + 190214555 83302392 83302391 83302470 79 TAAATAGGATTCATCTTTTTTTTTTTTTTCCCCTCACATGTGACCACCATGAATCTGAGAGCAGT------ATCGTGCTTGCTGC chr4 + 94230402 32004118 32004117 32004202 32004118 32004117 32004202 85 TGAAAAGCATTCTTTTTTTTTTTTTTTCCCCCTTCACATGTGAGCACTCAGACTATCAAAACAGGACTGAAACCGTGGTTGTTAC .:..x..x....x.:............::...:..........x...:xx..x.x.x.:.:...x------.:....x...:.:. 65M6I14M 57/79 72.2% 85/94230402 0.0% 6/79 7.6% 51298274 NA +5884 chr4 + 190214555 83306197 83306196 83306320 124 ACTTACAGGTAAAGGATCGAAGTTTTCATCCACTAAATGGTAGTTTCCTGCTCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACCTG chr4 + 94230402 47902438 47902437 47902561 47902438 47902437 47902561 124 ACGCACCGGCAAGGGCTTGAAGCCGGCATCCACCAGGTGATAGCTGCCAGCACCAAAGAAGACCTGCCTCATCACCACATCAATGCCACGCCGAGCCGCCAACCCCAGCTTGTCCAGCCACCTG ..x:..x..:..:..x.:....::xx.......:.::..:...:.x..x..x........x..:..............x..x..x..xxx:..:..:.x..:x....::..:............ 124M 88/124 71.0% 124/94230402 0.0% 0/124 0.0% 35403759 NA +3541 chr4 + 190214555 83310024 83310023 83310080 57 TACTTACTGATGCCATGTAACTGAATCAATCACTTCTCCACCAGCCTTCAGGAAGCT chr4 + 94230402 47903708 47903707 47903764 47903708 47903707 47903764 57 TACTCACTGGTGCCAGGTGACCGAGTCAATCGCCTTCCCTCCAGATTTCAGGAAGCT ....:....:.....x..:..:..:......:.:.::..x....x:........... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 35406316 NA +3129 chr4 + 190214555 83316849 83316848 83316914 66 TATCTTCTGGGACACCCGTTTTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTT----GTTTTTGTTT chr4 + 94230402 59675233 59675232 59675296 59675233 59675232 59675296 64 TGTATTTTGGCATAC------TGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTACCGTTTTCCTTT .:.x..:...x.:..------.x.................................----.....:x... 15M6D35M4I10M 52/60 86.7% 64/94230402 0.0% 10/60 16.7% 23641616 NA +3002 chr4 + 190214555 83316878 83316877 83316922 45 TTGTTGTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTTTGAGA chr4 + 94230402 43031797 43031796 43031841 43031797 43031796 43031841 45 TTGTGGTTTTTTGTTTGTTTGTTTATTTTTTTGGTTTTTTTTGGA ....x...................x..x....x........x:.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 40285081 NA +3102 chr4 + 190214555 83316882 83316881 83316919 38 TGTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTTTG chr4 + 94230402 53858855 53858854 53858892 53858855 53858854 53858892 38 TGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTTTTG ....................x........x........ 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 29458027 NA +6641 chr4 + 190214555 83322224 83322223 83322385 162 TTGACTTGAGATTGCCAGTAACTTCTCTCTTCAAAGGTTGATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTTGGTGCCACCAAACCTCAGGTACGCAGGAGACAAGCCTCTGGCCAAGGTACGAAGCTTTGGAGAACTGTTAGGAAGACAAGCAAGA chr4 + 94230402 47904718 47904717 47904877 47904718 47904717 47904877 160 TTGGCCTGAAATTCCGACAAGACTTTCTCTTCCCAAGTTGAATCTTTGTTGGGATTGAAGATCAGGAAATCTGTACTGGTGCCACCAAACCTGAGGAAGCCTGGGGAGAGCCCACTGGCCAGAGTGTGCAGCTTGGGGTGTCTGT--GGAAGGTAAACTAAA ...:.:...:...x.x.xx.:x:.:.......xx.:.....x..:..x.......:...:..:.....:.....x:................x...x.xx.x..:..x.:x..x.......::..::.x.....x..:x:x....--.....::..:.x.:. 145M2D15M 112/160 70.0% 160/94230402 0.0% 2/160 1.2% 35417506 NA +3006 chr4 + 190214555 83337559 83337558 83337602 44 GTCAAAAAAAAAAGAAAAAAAAGAAAAAGAAAAGAAACTGGGAA chr4 + 94230402 81563452 81563451 81563495 81563452 81563451 81563495 44 GTGAGAGAGGAAAGAAAAAAAAGAAAAAGAAAAGGGACTGGAAA ..x.:.:.::........................::.....:.. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 1774107 NA +3227 chr4 + 190214555 83344263 83344262 83344365 103 CATCTCTTGGAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAGGGAAAAAAGAAAAAAGTTATTTTAAAGAAAAACATTATTTAAGGAAGAGAGAAGC chr4 + 94230402 94191755 94191754 94191857 94191755 94191754 94191857 103 CACTCCTTTGGAAAAAAAAAAAAAAAAAGGAAAACTAAAAAGACTTTGGAAACAAAGCACAATGCTGCTTTGGAGGAGGGGAGAAAACAAAAACAAGAGAAGC ..:::...x.:..............:..:.....xx...:.:.xxxx..:..x....x.x..x.:.::...::..:.:::x.xx.xx:..::.x:........ 103M 64/103 62.1% 103/94230402 0.0% 0/103 0.0% -10847492 -83382910 +3979 chr4 + 190214555 83345487 83345486 83345569 83 CGTGGTGGTGGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x.:.--....:.:...........::........x.xx.x...x................x.xx:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 7312290 NA +3560 chr4 + 190214555 83355004 83355003 83355070 67 TGTAGTCCCAGCTACTTGTGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGGGGTTGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........x:........x:xx.x.:.x.......:.....::.x..x:.....:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 7321793 NA +3504 chr4 + 190214555 83356293 83356292 83356357 65 GTGGTGCACACGTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCAC--GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .........--.....:.:...........::........x.xx.x...x.:........::.:. 9M2D54M 50/63 79.4% 63/94230402 0.0% 2/63 3.2% 7323092 NA +3225 chr4 + 190214555 83360996 83360995 83361065 70 TGCACCTGTAGTCCTAGCTTCTCAGGAGGCTGAGGTTAGAGGATCCCTTGAGCCCAGGAGTTCGAGGCTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .....x......:.:....x..::::........x::x.x.:.x.x.....:.....:..:.:x:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 7327791 NA +3057 chr4 + 190214555 83368794 83368793 83368865 72 AAAATATGAAAAATACAATGTGATTCTATTTTCTTTGGCAATTTTTTTTGAAAAAAGAATATATATATTTTG chr4 + 94230402 71664226 71664225 71664297 71664226 71664225 71664297 72 AAAATGTGAAGAATGCAATGTAATTATGTTTTCAGTAATTTTTTTTTTTCAACTAATAACAAATATTTTCTG .....:....:...:......:...x.:.....xx.:::xx........x..xx..x..:.x....x..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 11704568 NA +3735 chr4 + 190214555 83376687 83376686 83376769 83 CGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.:.........:::.........x.xx.x...x................x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 7343490 NA +3408 chr4 + 190214555 83379855 83379854 83379927 73 AAAAAAAAAAAAAAAAAAAAACCCGAAACAAAACAAAAAACTCCCATTTCAGAAAACTTCTTTACAAAGAGGA chr4 + 94230402 79667724 79667723 79667791 79667724 79667723 79667791 68 AAAAAAAAAAAAAAAAAACAACCCACAACAAAACAAAAGCCTTC-----TAAAATAGTTCTTTGGGATGAGGA ..................x.....:x............:x..:.-----:.:..x.x......:x:.x..... 44M5D24M 54/68 79.4% 68/94230402 0.0% 5/68 7.4% 3712131 NA +3346 chr4 + 190214555 83405808 83405807 83405866 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAAATCACTTGAGCCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x:xx.x:..x.......:...:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 7372602 NA +8995 chr4 + 190214555 83416723 83416722 83416893 171 TTGCTTACCTTTGCTGATGAAACAATTTGCTTGGCTTGGCGTCTTGATAAATGATCAATTGTCCTTACGAGCACTTCAGGATTTGCATTAGCTAAGTGCATTAGACTTTTGTAACCTGCACTGTATAACTGTTTTGCTCGACCCTG-------AAAAGTG----------TTACAAAAATCAGTAGGA chr4 + 94230402 47909230 47909229 47909417 47909230 47909229 47909417 188 TTGCTTACCTTTGCAGACGAAACCATTTGTTTGGCTTGACGTCGTGACAAATGCTCGATCGTCTTCACCAGAGTTTCTGGATTTGCATTAGCTAAGTGTGCTAAAGTTTTGTACCCTGCATTATAAAGCTGTTTAGCTCGTGCCTGTAAGCCAAAAATTGTGTTAGGTTATTATAAGAGGCAGTAAGA ..............x..:.....x.....:........:....x...:.....x..:..:...:.:..x..x::...x....................:::..:.x.......x......:.:..x.:......x.....xx....-------....x..----------...:..:.:x.....:.. 146M7I7M10I18M 135/171 78.9% 188/94230402 0.0% 17/171 9.9% 35507493 NA +10042 chr4 + 190214555 83421546 83421545 83421743 198 ATATTCAATGAAATTACCTCACAGAAATGTAACACACAAGATGAGAATGAGGCAGTTCCAGTGAGAAGATTTTGTATATATCCTCGAGGCATATTAAATTTTTCAGATACAGTCCAAATGTTGGTCTCTTTGAGCAAGGTATAAAGAACAAAAGACAGATATAGCCTGTTGACAACGTTCTTGTCCACCTTCTAGAAA chr4 + 94230402 47912043 47912042 47912239 47912043 47912042 47912239 197 ATATTTAAC-ACACTACCTCACAGAAATGTAGAATACAAGAGGCAAACGAGGCAGCAGATGTAAGGAGATTCTGCACATAACCTCGGGACATGTTGAATTTCTCTGAGACGCTCCATACGTTGGTCTCTTTCAGTAGGGCATACAGGACAAATGACAGGTAGAGCCTGTTCACAGCAGTACTGTCCACATTCTAGGAA .....:..:-.x.:.................:x.:......x.x:..:.......:xxxx..:..:.....:..:.:...x.....:.:...:..:.....:..x..x..:x....x.:............x..:.:..:...x..:.....x.....:..x........x...:.:x.x:.......x......:.. 9M1D188M 147/197 74.6% 197/94230402 0.0% 1/197 0.5% 35509503 NA +9113 chr4 + 190214555 83427557 83427556 83427737 181 TCTCACCTGCCTGAAGTATATCATCCAATCAGGGTTACACTGTGAAACCAGATCATAGGGGGTTGTTAGGTAGATTAGATGAAGAAGGCTTTCAAGCACAAGTCCTTCAAGACCTTTCTTCAAGTCTCTGTACAGAATGTCACAATAAGCTAAATCTATAGTTCCTAAAAGAAAGATACAA chr4 + 94230402 47915044 47915043 47915224 47915044 47915043 47915224 181 TCTCACCTGCCTCAAGTATATCATCCAATCTGGGCTGCAGTTGGAAACCATGTCATACGGAGTAGCCAAATAGAGAAGATGAAGACTGCTCTCAAGAACCAGCCCTTCCAAGCCTTTCCTCAGCTCTTTGTAAAGAAGATTGCAGTACGACACATCTATAGACCCTAAAATAAGCACACAA ............x.................x...:.:..x.xx.......x:.....x..:..x.::.::....xx.........xx...:.....x..x..:.....x.::......:...:x...:....x....x:.::..:..x.x:.x........x:.......x..:x.:.... 181M 134/181 74.0% 181/94230402 0.0% 0/181 0.0% 35512513 NA +3256 chr4 + 190214555 83428431 83428430 83428503 73 TGCCCCTGTAGTCCCAGCTACTTGCGGGGCTGAGGTGGGAGAATCATTTGAGCCCAGGAGACGAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:...........x::.......x:xx.x...x..:....:.....:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 7395226 NA +12232 chr4 + 190214555 83431661 83431660 83432275 615 TACCTTCAAACCAATCAAAGAGAGAAATAATGTTTGGATTCCCTTGGTGAATTCCTGAACAAGATGGCTGTAACAGTTTTCCAATGGTTTAGTTATTAACTCCAATACCTATAAAGGTTAAAGCAAAACCATGCCTTGTGTTATTATTAAAAATAAATGGTATTTAATATAAATATTTTATACTTTACATAAAT-------CTTGTGGAGCCAGAAGGAGACCAAAAAAGTAAAGACAAAAGAATTTAACATTTATCTTCATTAAAAATGGAAGAAAAACAAATAGGA--AAAATATTTTTTCATTGTCTGAAATACATACATTTTCAAACCACTCTAATTCTTAATCATATAGGAAAGAAAGCATCATTTAAAGAAAATTAATAATTAATTTTTAAAAGATGATTTCATAAAAGGGCTAGACCAACAACCAAGAAAAAGACAAAAACAACCAACCAACCAAATTGAGTATTACCTGTTGTTTGTCTTTTTCTTGCAATATGAGGATACTCTCCCCAATAGTATCTATTCCAGCACGACCAGCTCTGCCAATCATCTGTTTATATTGATTCCTCTTTAAAAATTCCTTAGCAACATAGGGAGCTCTTAAAATAACTCTGTGGAA chr4 + 94230402 47916678 47916677 47917231 47916678 47916677 47917231 554 TACCTTCAATCCAACCAATGACAGCAACAGGTACTGCATTCCCTTGGTGATCTCTGGCAGAAGATTGCTGTAACAATTCTCCAAAGGACTGGTTATTAAATCTCGAACCTAAAAGGTCCCAAGAAATA-------------TATTGGTACAGAAAAATA----TTGATGTAATAGTTTTAAACAGTTCTGAAGTATTGATACTCGTGATTCT----GCTTATCAACAAAGTATCTGCAAAC--ATCTAGCATTTATAGC--TGATGCACGAAAACAATCCACGTATGACCAAAGCAATTAACAGGTAT------TACGTAAATC----AATTACT-------TCAAACAAATTCCACAGAAA---TTAGGCTAAGGAGCTCATCTACTCCTCTTTA--------TCTCA-------------CCAAC--TTAATCCAATGACTGAAACCACCAACAGCTTCA--TAAAAGTTACCAAATGTTTGTCTTTTTCCTGCACTACGAGAATACTTTCACCAGCGTTGTCAATCCCAGCTCGACCAGCTCTGCCAATCATTTGTTTGTATTGATTCTTCTTCAGGAACTCACTAGCAACATAAGGGGCTCTTAAAATCACCCTGTAAAA .........x....:...x..x..x..:.:xxx:..x.............x:..:x.x.x.....x.........:..:.....x..x:.:........x..:x:x.....x..:.x::x...x..x.-------------....:x..x.:.x....:----..:..:...xx:.....x..xx.x.xx..:.-------..:...:xx.:----.xxx.:...x......xxx:....x--..:..:.......xx:--.x.x:x.:.:..:x..xx..x:..x..--...::.x..xx:x:x.:.------...:..x..:----..::...-------.:..x..x..xxx.x.....---.:.xx:x...:.:x.:.x:x.:.xx.:....--------.:...-------------.....--::..xxx..x...x:....x......x:x::x.--.:.:x:.....x:x..............:....x..:...:.....:..x...:::x.:..x..:.....x....................:.....:.........:....:.::..:..x:..........:..:...........x..:....::.. 128M13D18M4D31M7I11M4D25M2D16M2D27M2I18M6D10M4D7M7D20M3D31M8D5M13D5M2D33M2D160M 366/545 67.2% 554/94230402 0.0% 79/545 14.5% 35514983 NA +3617 chr4 + 190214555 83434235 83434234 83434313 79 GTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 7401034 NA +12398 chr4 + 190214555 83436853 83436852 83437106 254 CTTACCTTCGAGCTGGTAGGTTGACACCTGCCGCTAGGGTAGATGTGCAGGTAAAAAGACAGAGCACTCCTGTGGAGTAGGCCTCCTCCAAGAGTTTCCTTTCATCACTTGTTAAGCCACTGTGGTGATAGGCAACTCCAAATGGGATAGTGCGCTTTAAAACAGGACACAGGTTGCCATTGCCAATATTCTTCAAGTTCTTAATCACCTCACATTTTTCTTTCTCCTTATGTTTCAGATATTCCCTATGAAAA chr4 + 94230402 47918058 47918057 47918311 47918058 47918057 47918311 254 CTGACCTTCTGGCTGGCAGGTTGACTCCAGCAGCTAACGTAGCTGTGCAAGCAAGAAGACACAGGACACCTCTAGAATATGCCTCTTCTATACTCTTTCTTTCATCATTTGTAAGGCCACTATGGTGATAGGCAACACCAAAAGGAATTGTTTGCCTCAGAACAGGACAGATGCTTCCATTTCCAATATCCTTTAGGTTCTTAATGAGGTCCTGTTTCTCTTTCTCCCTGTGAGCTCTGAATTCTCTTTGAGAA ..x......x:.....:........x..x..x....:x....x......:.:..:......x..x..x...x.:..:..x.....:..:.x:xx:..:.........:....x.:......:..............x.....x..:..x..x:..:.:.:.........x.x.:.x.....x.......:...:.:.........x.xx..x::...:.........:.:..xx::xx:x....:..x...:.. 254M 185/254 72.8% 254/94230402 0.0% 0/254 0.0% 35518795 NA +3748 chr4 + 190214555 83438611 83438610 83438753 143 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCACTTGAGCCCAGGAGACAGAGGCTGCAG----TGA-GCTAGCTGAATTTGTGCT-----ACTGCATTCCAGCATAGGTGA---CAGAG----TGAGACC------CTGTCTCAGGAAAAA chr4 + 94230402 76033204 76033203 76033367 76033204 76033203 76033367 164 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGC-TCCCAGCAT-GGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGA ...::.x......:...........::........x:xx.x.:.x.......:.....:..x:xx:.....:..----...-..:.:x:::..x.....:-----x....-.:.......-.....---.....----..:.::.------......x....:.:. 74M4I3M1I18M5I5M1D9M1D5M3I5M4I7M6I15M 104/141 73.8% 164/94230402 0.0% 25/141 17.7% 7405407 NA +8820 chr4 + 190214555 83439808 83439807 83440015 208 TAGTCTGTAATTCCTAATAAAAATAAAACAGGCTATTTAAAAAATATTAACATACTTGCTTAAAAATTTGCATATCATTTCTGCTACATTTTCACAGTTCTTCTTACTAGGACAAAAAACTAAGCAGGAATAATTGGGAATAACTTCTGTCACCAATGCTACCAAGTGATCAGGATCCATCTTTTTTAGGGTATCAGAATACTGCAAA chr4 + 94230402 47919117 47919116 47919318 47919117 47919116 47919318 202 TAGCCAACAATTCCATACGTAAGAAAAAAAA-----TCAGGAGATAA-AACATACTTGTTCAGATACTTGCAAACCATTGTAGCCACATTTTCACAGTTCTTTTTAGTGGGACAAAAGATTAGGCAGGAATATTTTGGAATAACTTCAGTAACCAGTGCAACGATGTGGTCAGGATCTGCTTTCTCCAGACTACTAGAATACTATCAA ...:.x::......xx.::x..:x....x.:-----.:.::.:...x-..........:.:.:.x.:.....x.:....x:x..:.................:...x.:........:.:..:.........x..x...........x..x....:...x..x.x...:........::::..:.::..:x..::........::x.. 31M5D11M1D160M 144/202 71.3% 202/94230402 0.0% 6/202 3.0% 35520691 NA +7140 chr4 + 190214555 83441298 83441297 83441408 111 ATGTTACCTTATAATTAAGAAGACGTGAAAAAGTCATGCCATTCTCAGCTTTGCTGTCAACTTCATATATTGTATCATTTATTTTCAGATATTCTTTTAACTCAACCTTGA chr4 + 94230402 47919997 47919996 47920107 47919997 47919996 47920107 111 ATCTTACCTTGAAATTAAGGAGACGTGAAAAAGTAAAGCCATTTTCTGCTTTGCTGTCAACTTCGTAAATTGTATCTCTTATCTTTATGTATTCCTTTAACTCCACCTAGA ..x.......:x.......:..............x.x......:..x.................:..x........x:....:..:.x:.....:........x....x.. 111M 92/111 82.9% 111/94230402 0.0% 0/111 0.0% 35521301 NA +6943 chr4 + 190214555 83443502 83443501 83443625 124 ACCTTAGGTACATACTGGTCTAAATTGACTGGTATAATATTCTGCTTGAAGAAACTTTTGTAGGTCTTCAACATTGTTTAATGTTGCACTCATACCAATAATTTGAGTCGTTTC--TAAAACACAA chr4 + 94230402 47920578 47920577 47920703 47920578 47920577 47920703 126 ATTTTGTGTACATACCGGTCTGAAATTTTTAGTATAGTACTCTGCTTGCAGGAACTTTTGCAGGTCTCCAACATTATTTAAAGTTGCACTCATTCCAACAACGTGGGTATTTTCTGTAAGACACAA .::..:x........:.....:..x.xx:.:.....:..:........x..:........:......:.......:.....x...........x....:..:x..:..xx....--...:...... 114M2I10M 97/124 78.2% 126/94230402 0.0% 2/124 1.6% 35522924 NA +5666 chr4 + 190214555 83446008 83446007 83446088 81 ACTTACTGCTAGTGTAGAGGATTTTTGCTAGGGTCATTTCCAGTGTAGCTCCACGGCTTCCTTCACCAATCATGTGCAACT chr4 + 94230402 47921152 47921151 47921232 47921152 47921151 47921232 81 ACTTACTACTGGCGTAAAGTATTTTTGCAAGAGTCATTTCCAGCACTGCTCCACGACTTCCCTCACCAATCATATGCAACT .......:..:.:...:..x........x..:...........:::x........:.....:...........:....... 81M 67/81 82.7% 81/94230402 0.0% 0/81 0.0% 35524856 NA +12782 chr4 + 190214555 83446828 83446827 83447041 214 AACCAACCTCGTCTACAACAACCAGACCCAGACTGTCAATTCTTCCAGTTTCAATCAAGGAGTTCACCAAGCTATGTCCTTTTTCAATAGTGGCAATATAGAGTGATTTCTTTTCCCTTCTTTTAGTTGGAGGAAATCTTCCTTTGCTTCCAGCATATTCTTCAACAAAGAAACCGAGTTCTATACCAAAACTTGACAAACCTGAAATCTAGAA chr4 + 94230402 47922197 47922196 47922410 47922197 47922196 47922410 214 AACCTACCTCATCTACTACAACTAGACCAAGGTCATCAATCCTATCCGTTTCAATCAAAGAATTCACAAGAGCATGTCCTTTTTCTATGGTGGCAATATAAAGTGACTTCTTTATTCTTCTCTTGATGGGTGGAAATCTTCCCTTACTTCCTGCATATTCTTCAACCAGGAAACCCAATTCTATCCCAAAGCTTGATAAACCCCAAACCTGTAA ....x.....:.....x.....:.....x..::::.....:..x:.x...........:..:.....x.::x:............x..:...........:.....:......x::.....:..::.x..x...........:..:.....x..............x.:......x.:......x.....:.....:.....:x...:..:x.. 214M 167/214 78.0% 214/94230402 0.0% 0/214 0.0% 35524631 NA +3314 chr4 + 190214555 83448070 83448069 83448152 83 CATGGTGGCACACACCTGCAATCCTAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--..:.:.:.:.........::.:......x.xx.x...x............::..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 7414873 NA +11949 chr4 + 190214555 83448778 83448777 83448980 203 CACACCTTTTCTTGGACAATTGCCACATATGGAAGAATCATTAAAACATCTTTCCGACAGCAAAGCAGTTCTTGCAGCATTAAAATCTCAGCCACGAGGGTTTTTCCACCACTTGTTGGCAAGGAATATATTAAATTTTTTCTTTCTTGCACAGAATTCAATGTTAAACAAGTATGTTGCCATTCTGTGGAATTAAAAAAAAA chr4 + 94230402 47922953 47922952 47923155 47922953 47922952 47923155 203 CAGACCTTTTCTTGGACAATGGCAACATACGGCAGGATCATCAGAACATCCTTCTGCCTGCAGAGTAATTCCTGGAGAATTAAAATCTCAGCAACAAGTGTTTTTCCACCACTAGTTGGTAACGAGTAAATCAAATTCTTCCTCTGCTGTAGAGATTTTAATGTTAAGCAATCGTGCTGCCATTCTGCAAAATTAAAAAAGAA ..x.................x..x.....:..x..:.....:.:......:...:.x.x...:..:.:...:..x..x..............x..:..x..............x.....:..x..:..x..:.....:..:..:.x:..:.x...x..:........:...x::..:..........:::..........:.. 203M 158/203 77.8% 203/94230402 0.0% 0/203 0.0% 35525825 NA +14260 chr4 + 190214555 83453226 83453225 83453963 738 ATTACCATATAATTTTTCAATTCCCTTGAATTGGGCATAAAGGTCTCTCACTTTGCTGGGTAATGAATAAAAAGGACCAAGGTCATTTGATGATGACTCAACTGTTTTCTTAGCAACATTAATTTCCTCAGATAGGAGAGTGTCTTTGAGCTGTTTACTTCTAGAAAATATTGGTGTCTGGGCCTTCGCATTTCCAGTCATGGCATTTTTTAGATGATCTTTAATACTTTTTCTCCTGTTCATATCTGAACTAGTTCTGACTTTGGAAGAGGACTCATCATTTTGCTGGGGTTGCTCTATGCAATTATGGGGCA-----GTTCCTCATTCACAGTGTTGTGAGAGGATGA---CTTCCAAT--CCCTTTCTTTCATAGAATGATCACCCAAATCATTTG---------AAGAGTTC-TGCAAATTTTCAAAGTATATAGCCTGTGAGGAAGGTACATCATACAAAAGATCAGCTCCAGGTTCAATAGTGACACCTTCATATCCACTCTGGTTCTCTGTG---------TGCTTATCAGTTTGTAATTCAGTAAGGTTGCCTATGGTA-GTAA--TGCTGAGTTTGTTTTTGATACTTTCCGAGCAAAGATTTTCAGTGGCAAAGTCTGTAGCATGTTTCTTATGTTCAGGGAGT-----TGCATATATTTTTGTTCCAGGTCGTCAACTTGAGCTATAAAGGAGT---TTTCAGTAAAGCTATCATAGTCACCAAACATGTCCACTTCACTGTCATT-----AGGCTGCAAAGAGAACAAAAA chr4 + 94230402 47923617 47923616 47924380 47923617 47923616 47924380 764 ATTACCATAAAGTGTTTCAATCCCCCGAAATTGCCTGAGGAGATGTTTAACCTTACTGGGTAATCCATAAAACGGGCCTATATCAAAAGACGATGATCCAATAGTTTCCCTAGCAACAGAAATCTCTTCAGATAAAATAGCTTCTTTAAGCTGCTTGGTCTTTGAGACCTTTGGAGTCTGGGCTTTGGCATTTCCAGTCAGAGCATTTTTCAGATGATCTTTAAGACTCACGCTTTTACATGAATCACACACAG---AGCCCTTGGAAGA--------TTTTGTGCTTCTGTTCTTGTGTCCAGAGTCAGGACACGGAGATGACGGACACCGGATTTTGTCCAAGGAGGAATTCTCCCACTTATCCATCCTTTC------TGTACCCGCAGACCTTTGGGAACGAGAAGAAAGCTCACGCGTTTTCTCCAAATACAAAAGCTGCGATGAAGGCAATTCATCGAAAACAGAATCACTGAGGTCTTCATCGGCATCTCCAGCATCATTTTCATTCATTTGGAAGCCATAATGTTCATCCACTTTACGTACACTACTATCTCCTGCGGCATGCAAATTGCCTTGCTTGCTTTGGTCCATTTCCAACTGAAGATCCCCATGTGCAAACCCTCCAGCTGCTTTC--ACGTCCAGGCCTTTTTCCTGGGAGTGCTGGGGCTCTGCATCAAGAACTTGAGCCAATAAGGAATCACTTTCATGAAAGCTATCATAGTCACCAAACATATCCTCTTCGCTGTCATTGTTACACTGTGAAAACAGAACAATAA .........x.:.x.......:...:x:.....xx::x::..:.x.:.x..:..:.........xx......x..:..x.x:...xxx..:.....::...:x....:.:........xx...:..:.......::.x..:x.....:.....:..:x.::.x..:.x:x....x........:..x.............x:........:.............x...:x:x..::.::x::x...xx.xx:..---x.x.:........--------:x..x....xxx...x:.x.:.x..:xxx::..:..-----:.xx.xx.:x.xx::.x....xx:....x..---..:...x.--:..x.:.....------..xx.x.x..:.:.x..x.---------:.:..:..-:..:xx..:..x..:..:.x.:x...:..x.....:.xx....xx....x.xx.x.x.:::.x..xx:.x:.:..:..:..xxx:..:.:.x:...x:.xx.---------..:.:...x::..xxx:.x..x..xx:.:x...::..:.-.:..--...:xx.:...:...x.x:xx.....:.x::.....:::..xxx.....x:..x:...xxx....--.:..:....xxx.-----..x:x:.::.xxx.:..::x:..:xx.........:.xx.....:.---.....xx........................:...x....:........-----.xxx..x...x.......x.. 254M3D13M8D36M5I31M3I8M2I11M6D19M9I8M1I102M9I39M1I4M2I65M2D13M5I46M3I49M5I21M 454/719 63.1% 764/94230402 0.0% 64/719 8.9% 35529609 NA +3053 chr4 + 190214555 83454202 83454201 83454251 50 CAAAAAAACCAAAACAAACAAACAAACAAAACCCCCAAAAAACACTTCAG chr4 + 94230402 34765062 34765061 34765111 34765062 34765061 34765111 50 CACAATAGTAAAAACAAACAAACAAACAAAACCCCCCAAAAACCATTTAG ..x..x.::x..........................x......xx..:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 48689140 NA +3180 chr4 + 190214555 83454203 83454202 83454250 48 AAAAAAACCAAAACAAACAAACAAACAAAACCCCCAAAAAACACTTCA chr4 + 94230402 9875537 9875536 9875584 9875537 9875536 9875584 48 AAAAAAACAAAAACAAACAAACAAAAAAAACCCCAAAAAACCCTTTTA ........x................x........x.....x.x:..:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 73578666 NA +5580 chr4 + 190214555 83458344 83458343 83458434 91 AGCCCATTTCAATGGAAAATCCTTATAAAGAACCTCTTAAGAAATGTATCTTGTGTGGAAAGCATGTAGATTATAAGAATGTACAGGTGAG chr4 + 94230402 47926101 47926100 47926191 47926101 47926100 47926191 91 AGCCTATAGAAATGGAGAATCCATATGAAGAGCCTCCTAAAAGATGTATATTGTGTGGAATAAATGTGGACTACAAGAATGTGCAGGTGAG ....:..xxx......:.....x...:....:....:...:.:......x..........x:x....:..:..:........:........ 91M 72/91 79.1% 91/94230402 0.0% 0/91 0.0% 35532243 NA +5056 chr4 + 190214555 83459735 83459734 83459803 69 AACAGCTTTTGTCCCAGTTTGTTTCTCCATTTACTGGATGCATTTATGGAAGGCACATTACAGGTATGT chr4 + 94230402 47926509 47926508 47926577 47926509 47926508 47926577 69 AATAGCTTCTGTCCCAGTTTGTTTCTCCATACACTGGCCGCATTTATGGCAGGCATATAACAGGTATGT ..:.....:.....................x:.....x:..........x.....:..x.......... 69M 60/69 87.0% 69/94230402 0.0% 0/69 0.0% 35533226 NA +7285 chr4 + 190214555 83460948 83460947 83461197 250 AATAAGAAAGCTTTTTATTTTACAGGTCTTTGTGGGAAGAAACAGAAAGAAATCACAAAAGCAATTAAGAGAGCTCAAATAATGGGTAAGAA--AGAATACCTCAACAACTGAATTGAGCTAGCTGAAATTTTGCTCATTATGTTTTGTCAAGAACTTTAA--TTATCTCTTTACAGGGTTTATGCCAGTTACATACAAGGATCCTGCATATCTCAAGGACCCTAAAGTTTGTAACATCAGATATCGGGAATAA chr4 + 94230402 47926753 47926752 47926994 47926753 47926752 47926994 242 AAAAAATAACTTATTTGTTT---AGGCTTGTGTAATAAGAAGCAGAAAGAAATTTCAAAAGCCATTAAAAGAGCTCATATACTTGGTGAGTATTGTTATACTTCAGA----GTATTTGGTAAGTCACACTTATCCT--TTA---TTTAAAAAAATCCTCCATTTTATTTTCTTACAGGATTTATGCCAGTTATGTTTAAGAACCCATCATTTCTTACAGACCCCAAGATTTGTAATGTTAAGTATTGAGAATAA ..x..:x..x:.x...:...---...::.x...::x.....:...........:x.......x.....:........x...x.x...:..x.--:xx....:...:x----.x...x:.:x..:::x.x..x.x..--...---...:xx..:.x.:.:x.--....:.::.......:.............::.x:...:.:..xx...x...:.x:.....:..::.......::.:.::...:.:...... 20M3D69M2I13M4D25M2D3M3D17M2I91M 163/238 68.5% 242/94230402 0.0% 16/238 6.7% 35534195 NA +9221 chr4 + 190214555 83462468 83462467 83462919 452 ATCAAAATGTAGGAGACCGTGAATATTCACCAAAACCCTTCATCTTTTCAA---TTTCTTCATCTGTTTCTGGGCTGCTCATTTTGGATGCTTTATCTTGGTTACTACTACCAGTATCTGCTTTAGATCGTTTGTCTTGTGTATCTAACAACCGAGATCTCTTGAATTGCCAT----CTGTCATCTAAGTCTAAGGCTTTATGCTTAATGATTTGTGGTGTACTAGCTGGACT--AGCTTCAGGAATGTCAGTGTGTTCTACCATTAAGGTCAGATTGTCTACTACATCGAGATGGTGGTTGTAGTTACAGCTACTTTTAGAAACATGTCTATTTTTTAAAGACATAACACATGAATGAAGAAATTCAGAATTTGGAAAAAAGGTCCGTAATGCCTGACAAAGAAAAATGTTCTCCTGAGGGTCTTTT---TGGATGTTCTTCTCTCCTAAACAAAATAGAATA chr4 + 94230402 47928335 47928334 47928777 47928335 47928334 47928777 443 ATCAGAAAGTGGGAGAGTATGAATATTCGTTTGTATCTTTAGGGTTTTCCAATGCTTCCTCATCTGTTTCAGTGCTACTCAGTGCGAGCTTTGTTTCCTGGTTGCAGTCTTCTTCATCTTGATGTAATTCTTGGTCAAGT---TGCAGTGACCTTAATTTCTTCAATGATTTTGGTCCTGTTGT-GGTGACTTTGACTTTGCGCTTGGT-----------TACTAGCTTTGTTTCAGCTTCAGTGAAGTCCCTTTCCTCTACCATGAGAGTCAATTTGTCCATGATATTAATATTATGGTCGATCTTACAACAGTTCTTAGAGAT---CCTTCCCTTGAAGGAAACAATACATGTCTGAAGA---TCAGAACTGGGGAAAAATGTTCTCAGTGCCTGACAAAGCAAAACGTTTTCCTTTGGTTCCTCTAGCTGATCTTTGTTCCCTCCTGAAAAACAAAGGTTA ....:..x..:.....x::.........:::x:x.:.:..x:xx.....x.---:...:...........x.x...:....x.x:.:::x:.x.x..:.....:.x:::x:.xx:....xxx.xx:..:x..x...xx..---.x:.:::...xx:..:....x...x:::x.----....::.-x:x.x..xx.:....::....::.-----------........xx::.--........x:.x...xx.x.x:........x.::....:x.....:.:x.:..::.x..x:....:.xxx.....:.x::.:.....:.:---:..x:::..x..:..x.:..:.....xx......---......:.x..:.....x..:.x:.:............x....:...:....xx..x..:.:.---..:x:x..x...:.....:..x..x.x..:x.. 51M3I86M3D30M4I7M1D24M11D13M2I90M3D34M3D63M3I33M 270/431 62.6% 443/94230402 0.0% 33/431 7.7% 35534133 NA +3521 chr4 + 190214555 83464051 83464050 83464129 79 GTGATGCATGCCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGTGAATCGCTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--......:.........::::..:.....x.xx.....x.:...........:.:x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 7430850 NA +3257 chr4 + 190214555 83465156 83465155 83465256 101 CGTAGTGGTGGGTGCGTGTAATCTCAGCTACTTGGGAGGCTGAGACAAGAGAATCTCTTGAACCAGGGAGGCGGAGGTTACAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.......--::......:.::..........::........x.xx.x...x.x........x:.:..x:xx:..:.::..------..x..x...... 10M2D71M6D12M 65/93 69.9% 93/94230402 0.0% 8/93 8.6% 7431959 NA +6464 chr4 + 190214555 83467445 83467444 83467548 104 TTAACTTACCTTTAATTCCTCTTGTAATGAAGCATACATTTCATTTATCTTATGTACCTCCTTTAAGGATCCATCTTCTTCAAAAAATTTAGAGCTGTAAAAAA chr4 + 94230402 47929429 47929428 47929532 47929429 47929428 47929532 104 TTAACTGACCTTCAGTTCCTCCTGCAAGGTGGCATACATCTCATTTATCTTGTGAACCTCTTGTAAGGATCCATCTTCATAAAAGAATTCTGACCTGTAGAAAA ......x.....:.:......:..:..x.x:........:...........:..x.....:.x...............x.x...:....:x..x.....:.... 104M 84/104 80.8% 104/94230402 0.0% 0/104 0.0% 35538016 NA +11304 chr4 + 190214555 83470149 83470148 83470413 265 ATTAGATATATTTTTCTATTAGTTTAATACAGCCAGT-----GACTGGCCAACATTTACCCTTTTTGAGGTTTATATAAGGAATGTTCCAGTCGATGAGTAGAGCAGCTTTCTGTTATTATACTTGGTGTTAATAGCAGAAAAACAAGGTCTTGGTTTGAAAAATGCTCCTGCAAGTTTTTGTGAAGCAGCCTCTCTCTAAACGTCATGATCTGATCTGAATGACGACGGAATTTGTACCAACCTACCACATTCTGAAATACAGAATAAA chr4 + 94230402 47930579 47930578 47930840 47930579 47930578 47930840 262 ATCAAATAGGTTATTTAATGGCTTTGTTAAAACTAGAAAACAGACTGG-------TTACCCTTCTTGTGGCCGGTGTAAGGCATGTTCTAGCCTGTAAGTTGAACAGCTTTCTGTCATCACACTCGAAGTTAATAGAAGGAATACAAGGCCTTGGTTTGATAGGTGTGACTGCAAATTCTTATGCAGAAGTCTTTCCCGGAATGTCATGATCTGGTCTGTGTTGCGTCTGAATTTGTACCATCCTATTACACTCTGCAA-ACAGAACAAA ..:.:...x:..x..:x..x:x...:x..x.:.:..x-----......-------........:...x..::x:.:.....x......:..:.x:.:...x..:...........:..:.:...:.:x........x..:..x......:..........x.::..:xx......:..:..:..x..x..:..:..:.x:..:...........:....x:.x:..x.x............x....::...:....x..-......:... 37M5I6M7D204M1D10M 186/257 72.4% 262/94230402 0.0% 13/257 5.1% 35539570 NA +3227 chr4 + 190214555 83476638 83476637 83476690 53 CTTACCTAAAAAGCTGATAGCATGGAATATATTTCTGAATGTCTGGAAGAAAA chr4 + 94230402 47932288 47932287 47932340 47932288 47932287 47932340 53 CTCACCTGAACAGCTGGTAGCATGGAATATGCTTCTGTATATCTGAAATGAGA ..:....:..x.....:.............::.....x..:....:..x:.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 35544350 NA +6921 chr4 + 190214555 83482133 83482132 83482246 114 TAGGAGAAATAAATA---ACTCACCAATTGTATAAACAACTTCAACATCATCCATTTGGGAATCAGTAATGCTGTTCTTGGCTTCACCTTTTACTTCCCCAAGAAGAAAACCTTCCT chr4 + 94230402 47933073 47933072 47933189 47933073 47933072 47933189 117 TACGAGAAATGAGGATGCACTGACCGATCGTATAAACCACTTCCACGTCGTCCATCTGTGAGTCGGTGATGCTGTTCTTGGCCTCACCTTTCACATCTCCAAGGAGAAAGCCTTCCT ..x.......:.:x.---...x...:..:........x.....x..:..:.....:..x..:..:..:..............:........:..x..:.....:.....:....... 15M3I99M 92/114 80.7% 117/94230402 0.0% 3/114 2.6% 35549060 NA +6816 chr4 + 190214555 83484851 83484850 83485124 274 GCAGAGCCGCGACCGCAGGGAGGAGGCGCGGCGGCGTCGGGGGAGCGGGCGGGGACCGGAGCAACAGCGG--GGAGGCAGGCCGCGCGCAGG----------GCTCTTCCCAGGCGAC----GCCGGACCCCGCCCCGTCCCTCGGC--TCACCGTGTCCGAGTCCGTGTTGAGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGCACCGCCGACGTACTCTCCCCCTCCATGCTACCGCCGCCTCAGGCTACACAAGAGGACGAGGGCGGGGCGCGCGGAGGC chr4 + 94230402 47933712 47933711 47933968 47933712 47933711 47933968 257 GCGGCACCGCCAGCTCCGGGCGTGGGCAGGCCGGCGGCTG-----CGGGCTGCGAC-------ATGGCGGCTGAGCGctgcccgcgcgcgtgcacagcggccgccccgcccggccgcctctcgcccgcccccgtcccg-cccgcGGCACGCACCGTGTCCGAGTCGGTGCTGAGGAGCTGGAAGGCGAGGGCGCCGAACACGAAGGCCGAGAGTAGAGTCGACATGATCTCTTACTCAATGATG--------------TATACA--------ATGGCGGGCCGCGCCGCGGC ..:.x:....x.x.x.x...x.x:...:x.x.....x.x.-----.....x.x...-------.::....--.::x..x.x........:x.----------..:.:x...:.x..x.----...x.x.....:....-...x....--x...............x...:.....x.......:.....x.......:...:...x.......:.xx.:....:.:x....::x...x...x.:--------------..:...--------.x......x.....x.x... 40M5D11M7D7M2I20M10I16M4I16M1D8M2I95M14D6M8D20M 176/239 73.6% 257/94230402 0.0% 53/239 22.2% 35551139 NA +7725 chr4 + 190214555 83484974 83484973 83485158 185 CCCTCGGC--TCACCGTGTCCGAGTCCGTGTTGAGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGCACCGCCGACGTACTCTCCCCCTCCATGCTACCGCCGCCTCAGGCTACACAAGAGGACGAGGGCGGGGCG---CGCGGAGGCAAGA---CCCTGTGGT----GGCAGCGAGGCGGGGCCCAGC chr4 + 94230402 47934594 47934593 47934768 47934594 47934593 47934768 175 CCCGCGGCACGCACCGTGTCCGATTCCGTGCTGAGGTGCTGGAAGGCGAGGGCGCCGAAGACGAAGCCCGAGAGCAGAGCCGACGTGCTCTCGCCCTCCATGCCCCC----------------------TACAATggcgggccgcgccgcggcggcgggAGCCCCCAGCGGTCGCCGGTGGCAGGGCAGGGCTCGGC ...x....--x............x......:.............:.....x.......:x..:.............xx........:.....x..........:x..----------------------x..:.x......x..---.....x...::..---...x.:...----..::..::...:....:.:.. 8M2I97M22D15M3I13M3I9M4I21M 132/163 81.0% 175/94230402 0.0% 34/163 20.9% 35550380 NA +3897 chr4 + 190214555 83488178 83488177 83488251 74 GTGCGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:...........:.........x.xx.x...x..........::.:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 7454974 NA +3988 chr4 + 190214555 83488608 83488607 83488690 83 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 10M2D71M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 7455411 NA +3743 chr4 + 190214555 83489143 83489142 83489344 202 TTAGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATCATGCCACTGTACTCCAGCGTGGGCCAG-ACCCAGTTTCAAAAAAAAATCAGTCAAGTGTGGTAGTGCACACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCGGGAGGATTGCTTGAGTCCAGGAGCTTGAAGCTGGAG chr4 + 94230402 76033094 76033093 76033277 76033094 76033093 76033277 184 TTGGGAACCTGATTTGAGGAAGTAGACTGAAAGAGGAGGGCAGAAG--GCAGTAA----AGATTAGGGACCTG-------GTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACA----CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...:x....xx..:.::::.x.x:...:xxx:.::........--.....:.----....:.x.xxx...-------.:x....xx..-.:x:.:.x...x:...::..x.xx..----::..:......:--......:.........x.::........x.xx.x.:.x::.....::....:.....x::....x.. 46M2D7M4D14M7D11M1I26M4D12M2D67M 118/183 64.5% 184/94230402 0.0% 20/183 10.9% 7456049 NA +3015 chr4 + 190214555 83490439 83490438 83490497 59 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGGATCTCAATCCTGT chr4 + 94230402 14492260 14492259 14492318 14492260 14492259 14492318 59 TTTTCTGTTTGTGGTTTTTTTTTTTTTTTTTGTATTTTTAAGCAAAATCACATTTCTGT ....:.x...x.xx.................x.x......::..::...x..x.:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 68998179 NA +3467 chr4 + 190214555 83493883 83493882 83493965 83 AGTGGTGGCAGGCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----..:x....:.:...........::........x.xx.x..:x.............:.:x:xx:..:..:.. 7M5D71M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% 7460683 NA +3544 chr4 + 190214555 83494254 83494253 83494326 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGAGGTGGAGGTCGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.x...x::...........:..x.xx:..::.:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 7461049 NA +3115 chr4 + 190214555 83494674 83494673 83494724 51 AAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548423 85548422 85548473 85548423 85548422 85548473 51 AAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..........:.:x.....:...:.:.:.::...:..........x..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -2053749 -92176653 +3612 chr4 + 190214555 83494675 83494674 83494744 70 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT-AAACATGTATATATAT chr4 + 94230402 85548420 85548419 85548490 85548420 85548419 85548490 71 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .............x.xx.....:...:.:.:.::...:..........x.....-.:.....x....x:.. 54M1I16M 55/70 78.6% 71/94230402 0.0% 1/70 1.4% -2053745 -92176657 +3588 chr4 + 190214555 83494679 83494678 83494793 115 AAAAAAAAATATATATATATATATATATATATATATATATATATATATATAAACATGTATATATATATATAAACATGTTTATATATATTTTTTATATATGTTGATATATATGTTT chr4 + 94230402 58988593 58988592 58988697 58988593 58988592 58988697 105 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTAT-----GACAAATTTATTCTTACTGTCAAT-----TTAATACATGTGTTT ......:..xx............:.:.:..:......x.:..:.x.xx....:...x....xx...-----:...x:.....x:x..:.x.:x..-----..:...:..:..... 66M5D24M5D15M 75/105 71.4% 105/94230402 0.0% 10/105 9.5% 24506086 NA +3584 chr4 + 190214555 83498316 83498315 83498460 145 AGAAAAAGAAGGAAAAGAAAAGAGGAGAGGAGAGAGAGAAAGAAAGAAGAGAGGGAAAGA---AAGAAAAAGGAAAGAAAGAAAGAAAAAGGGAAGAAA----GAAAAAGAGAGAGAGAGAA------AGAAGGAAAAAAAGAAGGAAAATGGACTCT chr4 + 94230402 1317416 1317415 1317570 1317416 1317415 1317570 155 AGAGGAAGAAGGAAAAGGAAA---GAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCT ...::............:...---....::...:.x..xx.:..x..::..x..:..x..---.:..:::...:....:...:x:x..:x.........----..xxx...:..::..:.x.------:...x.:....::::..xx..:x:..x... 21M3D36M3I36M4I19M6I30M 93/142 65.5% 155/94230402 0.0% 16/142 11.3% 82180900 NA +3029 chr4 + 190214555 83498349 83498348 83498452 104 GAGAGAAAGAAAGAAGAGAGGGAAAGAAAGAAAAAGGAAAGAAAGAAAGAAAAAGGGAAGAAAGAAAAAGAGAGAGAGAGAAAGAAGGAAAAAAAGAAGGAAAA chr4 + 94230402 49206534 49206533 49206637 49206534 49206533 49206637 104 GAGATGAATAAATGTGAGAAGAAAAAAATGAAAATGTTTGGAAAAAACGAAAATGAGAAGAATTAAATGAAATGTTATAAACTTTAGGAAGAAAAAAAAAAAAA ....x:..x...x:x....:.:...:..x.....x.xxx:....:..x.....x.:......xx...x::.:x.xx.x.:.xxxx.....:....:..::.... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% 34291815 NA +3034 chr4 + 190214555 83498371 83498370 83498426 56 AAAGAAAGAAAAAGGAAAGAAAGAAAGAAAAAGGGAAGAAAGAAAAAGAGAGAGAG chr4 + 94230402 78266968 78266967 78267023 78266968 78266967 78267023 56 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAG ..::...x...:.xx...:...:...xx.........:.:...:.........:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 5231403 NA +3219 chr4 + 190214555 83501795 83501794 83501949 155 GAACATTTCTCTTTCTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTCCTTCT--TTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCTCTC chr4 + 94230402 21408804 21408803 21408950 21408804 21408803 21408950 147 GAACTTTTATTTTCCTTTTTACTGGTTCTTTCT----------ATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCC ....x...x.:..:...:..x..xx:.......----------x....x.:.:....:...xxx..--...:::..:..:.:.:.x.xxx::x....:.....::.........::::.xx:...x:.x.xxx::.x...:.:.:::..:..:..:. 33M10D23M2I89M 87/145 60.0% 147/94230402 0.0% 12/145 8.3% 62092991 NA +3068 chr4 + 190214555 83501802 83501801 83501912 111 TCTCTTTCTTCTTTCTTTCTCTTTC--------TTTCTTTCTTTCTTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTT chr4 + 94230402 36195259 36195258 36195376 36195259 36195258 36195376 118 TTTCCTTCGTGTTT-TTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTTAGCGTTTTT .:..:...x.x...-..:x....:.--------..........x:........:.......:x..:x..:.xxx:..x:.:x...x...:....x:.:.:.::...x:..xx.x..:.. 14M1D10M8I86M 73/110 66.4% 118/94230402 0.0% 9/110 8.2% 47306543 NA +3787 chr4 + 190214555 83501834 83501833 83501951 118 CTTTCTTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCT------------TTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCC----TTTCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCTCTCTC chr4 + 94230402 48010635 48010634 48010768 48010635 48010634 48010768 134 CCTTCTTTTCTGCTGTACCTCCATTTTTTTTGTCTTTCTCCTTCACGTGGATTTTTTTTTTTACTAAATTCATATTTTCCCTTCCCAACTTTCCTAGTGCCTTTCCCTCTGTTTTCATTCTCTGTCTCCTTCTC .:.........x::x.x...:.x..:...:.x..:....------------..:...::...x..xxx:..x.x:...:.:....----....:.xx.x.:....::...x.:...x...........::.... 39M12I34M4I45M 81/118 68.6% 134/94230402 0.0% 16/118 13.6% 35491199 NA +3485 chr4 + 190214555 83501835 83501834 83501961 127 TTTCTTTTCTTTCTTTCC--TTCCTTCTTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTTT-------------CTCTGTCTCTCTCTCTCCCTTTCTC chr4 + 94230402 21408809 21408808 21408950 21408809 21408808 21408950 142 TTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCC ...x.....:..:..x.:--...:....x.:..x:...:..::..:xxx:.xx...:.:.::..:.::..x:xxx:.x....................::.:..-------------x....::.:...:::.x......:. 18M2I84M13I25M 81/127 63.8% 142/94230402 0.0% 15/127 11.8% 62093026 NA +4560 chr4 + 190214555 83501839 83501838 83501973 135 TTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCTTT-CTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCTCTCTCTCCCTTTCTCTCTCTTTTTTTT chr4 + 94230402 50176266 50176265 50176401 50176266 50176265 50176401 136 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTT ......x...:x.:x::..:.......:.:..x.::-.::x.:...x.x.:x:.......x......x:x...x.:...x.:..............xxxx:.:::...:.:x.:.:.:.x....::......:... 36M1I99M 87/135 64.4% 136/94230402 0.0% 1/135 0.7% 33325573 NA +3174 chr4 + 190214555 83501872 83501871 83501946 75 TTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCT chr4 + 94230402 36924288 36924287 36924362 36924288 36924287 36924362 75 TTGCTTTCCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTTAATTTGTCAGTATTT ..x.......x..:..x.......x....:..:.:::..:.......::...x.:.x.:.xx...x..x..x.:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 46577584 NA +3164 chr4 + 190214555 83501884 83501883 83501953 70 CCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCTCTCTCTC chr4 + 94230402 32205781 32205780 32205850 32205781 32205780 32205850 70 CTTTCATTTTCTGGTGTTTTTTTTTTGTACGTTCTTTTCTTTCTTTCTTCCTTGTCTGTCCCTGACCCTC .:...x:.:.:.xx.x.:...::...x.x.x...................:..x......:..xx.:... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 51296103 NA +3299 chr4 + 190214555 83521061 83521060 83521189 129 TGTCTTATCTTTTCTTTTCTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT---------TCTTT-----CTTTCTTTCTTTCTTTCTCTCTCTCTTCTGTCCCACACAT chr4 + 94230402 33934167 33934166 33934309 33934167 33934166 33934309 143 TGTCTGCTGTTTATCCTTCTATTTACTTGCTTTTTTTTCTCATGTAGTGTTATCTTTTTTTTTTCCCTTCTTTCTTTCGTGCATGTTCAGAGCTGTTTAATAACTTTTCTCCTTAATGTCTTTTTCCTTTGTGTCAAATATAT .....xx.x...x:::....x..:x...x::....:..:..x.x.xx.x..x.....:...:..:.:...........x.x.x.---------.x...-----....::.:...xx.x...:.:..::..x....xx.:.:.. 84M9I5M5I40M 85/129 65.9% 143/94230402 0.0% 14/129 10.9% 49586894 NA +3267 chr4 + 190214555 83521065 83521064 83521169 105 TTATCTTTTCTTTTCTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCT chr4 + 94230402 48874866 48874865 48874967 48874866 48874865 48874967 102 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCT---TCTCTTGTTTTCTTTATCT ..x...:.....:x.x.x........:x.xxx.:..:x...:::....x::.:..x::.x.........x.:.x..x...:..---.:....x:.......x... 83M3D19M 68/102 66.7% 102/94230402 0.0% 3/102 2.9% 34646199 NA +3474 chr4 + 190214555 83521070 83521069 83521151 82 TTTTCTTTTCTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ............x..:..x.:..::.::.::....xx:.x:.x.:.........:...::...x.....x..xx:.x..... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 26149042 NA +3200 chr4 + 190214555 83521078 83521077 83521148 71 TCTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTT--------CTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 77321719 77321718 77321797 77321719 77321718 77321797 79 TCTGTTACCTTGTGTTTTCTTTTCTTTTATTTTTTTTAATCTTTAAGATTAACTTTGCTTCTTTCTTTCTCTGGTCCTT ...x..x:...x.x..............x.......:xx.....--------....x:............:.xx.:... 44M8I27M 56/71 78.9% 79/94230402 0.0% 8/71 11.3% 6199359 NA +3206 chr4 + 190214555 83521087 83521086 83521163 77 TTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ............x..::.x:::.::....::....-----..x.:.........:...::...x.....x..xx:.x..... 35M5I42M 55/77 71.4% 82/94230402 0.0% 5/77 6.5% 26149059 NA +3190 chr4 + 190214555 83524542 83524541 83524580 39 CAAAAACAAAAACAAACAAACAAACAAAACCCCCCAAAA chr4 + 94230402 34765064 34765063 34765102 34765064 34765063 34765102 39 CAATAGTAAAAACAAACAAACAAACAAAACCCCCCAAAA ...x.::................................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 48759478 NA +3015 chr4 + 190214555 83524543 83524542 83524581 39 AAAAACAAAAACAAACAAACAAACAAAACCCCCCAAAAC chr4 + 94230402 9875539 9875538 9875577 9875539 9875538 9875577 39 AAAAACAAAAACAAACAAACAAAAAAAACCCCAAAAAAC .......................x........xx..... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 73649004 NA +3272 chr4 + 190214555 83529194 83529193 83529291 98 CAGTGGTGGCACGCGCCTGTAATCCTAACTACTTGGGAGGCTGAGGCAGGTGGATCACTTGAAGTCAGGAGTTCGAGACCAGCTTGGCCAACATGGTG chr4 + 94230402 76033199 76033198 76033286 76033199 76033198 76033286 88 CAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC-----TGTAGAACATGATG ........-----.:.x....:.:.:.:.......::........x.xx...:.x........x:...:..:.:x:.:.-----..xxx......:.. 8M5D66M5D14M 63/88 71.6% 88/94230402 0.0% 10/88 11.4% 7495995 NA +3090 chr4 + 190214555 83531508 83531507 83531583 76 ACTCCACCCTGGGCAACAGAGCAAGACACCGTCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTATGTGCCTG chr4 + 94230402 7001191 7001190 7001266 7001191 7001190 7001266 76 ATTCCATTCTTAAAAACATAGAAGAACATCTTGACTAAAAAAAAAAAAAAAAATACCCAAAAAGACAATATGCTTG .:....::..x::x....x..x.::...:.x.xx...................x.xxx.......xx..:...:.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 76530317 NA +3150 chr4 + 190214555 83533031 83533030 83533139 109 CAGCTGTTTGTGTGTATATATATATACACACATATATATACATATGTGTATATATATGCATATATATACACATATATACACATATGTATGTATATATATGTGTACATAT chr4 + 94230402 5214227 5214226 5214321 5214227 5214226 5214321 95 CATCCGTGTGTGCGCAAGTGTCTGCACACACATCTAC--------GTGTATGCATTTGCATGTGTGTGCGCA------AACGTGTGTGTGCATGCAGATGTGTGCACAT ..x.:..x....:.:.x:.:.x.::........x..:--------......::..x.....:.:.:.:.:..------x..:.:...:..:..::.x......:..:.. 37M8D27M6D31M 64/95 67.4% 95/94230402 0.0% 14/95 14.7% 78318804 NA +3244 chr4 + 190214555 83533049 83533048 83533114 66 TATATATACACACATATA------TATACATATGTGTATATATATGCATATATATACACATATATACACATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x...........------...xx:......::...:...:....:..:...:.x.....x..::.. 18M6I48M 51/66 77.3% 72/94230402 0.0% 6/66 9.1% 41783953 NA +3107 chr4 + 190214555 83533080 83533079 83533163 84 ATATATATGCATATATATACACATATATACACATATGTATGTATATATATGTGTACATATACACACAGGTGTGTAAGTGTATAT chr4 + 94230402 22600200 22600199 22600283 22600200 22600199 22600283 84 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAAT .:.:....x..:..::.x......::.....x.x..:.:.:...x.:.:......:..::.::...:x:x...xx....x.x.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 60932880 NA +3178 chr4 + 190214555 83542862 83542861 83542940 79 GTGGTGGGTGCCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGGTGGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--...x..:...........::........x.xx.x...x.:.........x.:..x.xx:.::..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 7509661 NA +3214 chr4 + 190214555 83546318 83546317 83546413 96 AATTTGGCAGGTGATGGGATTAAAAAATCAGTAGATGAGAGGGTCTAGTAGCGTGGATTTAGTTTTTTTTTTTTTTTTGCCTATACAGAAATGAGA chr4 + 94230402 44908987 44908986 44909082 44908987 44908986 44909082 96 AAATTGGAATGTTATGAAATTTTTAAATAAATACAGGACTAAATATACTTGTTTGGATTTCTTTTTTTTTTTTTTTTTACTTAAACAGGTTTGAGA ..x....x.x..x...::...xxx....x.:..x.x..xx:::.x..x.x.:x.......xx................:.:..x....:xx..... 96M 65/96 67.7% 96/94230402 0.0% 0/96 0.0% 38637331 NA +3137 chr4 + 190214555 83547820 83547819 83547892 73 GTTATTGCACTTTCACCTTCCTCTTCTTCTTCCCTTTTTTTTTTTTTTTTTGAGATGGGGTCTGGCTGTATTG chr4 + 94230402 73711706 73711705 73711778 73711706 73711705 73711778 73 GCCATTATGCCTTCACCTCCCTTTTTTCCTTCATTGATTTTTTTTTCTTTAAAGATATGCTCTTAGTGTATCG .::...:::.:.......:...:..:.:....x:.xx.........:...x:....:x.x...x:x.....:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 9836114 NA +3056 chr4 + 190214555 83556494 83556493 83556575 82 TCTCAAGAAAAAAAAAAAAGAAAAAGAAACAAACAAAAAAGGGAACTCTGCCTGTTATTCTCAACGCTATTTTTTTTTCAGT chr4 + 94230402 63205517 63205516 63205598 63205517 63205516 63205598 82 TTTCAAGAGGCAGAGTAGAGAAGAAAAAAAAAAAAAAAAAGGAATTTTTGTTGGGTTATTTCAACACTTTTTCACTTTTAGT .:......::x.:.:x.:....:..:...x...x........:.x:.:..::x.x.xx.:.....:..x...:x:...:... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 20350977 NA +3262 chr4 + 190214555 83574611 83574610 83574695 85 TAAAGTAA--AATGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAATTAGAGTTTTACCA chr4 + 94230402 34187254 34187253 34187340 34187254 34187253 34187340 87 TAAAATAATCAGAGAACATTTTTTTTTTAATACTTTAGGTTTTTTTTATTTTTTTCTTTTACTTTTGTTAGAAGCAGGAAATTACCA ....:...--.:x...:x..........xx.x:...xxx........x.......:....x:....x......x:..::xx...... 8M2I77M 62/85 72.9% 87/94230402 0.0% 2/85 2.4% 49387357 NA +3066 chr4 + 190214555 83574850 83574849 83574897 48 CTCCCGAACATTTCTTTCTTTTTTTTTTTTTTGTTTTTTTTTTTTTGA chr4 + 94230402 24062476 24062475 24062523 24062476 24062475 24062523 48 CTCTCTTGCATTTCTACCTTTTTTTTTTTTTTGCCTTTTTTTTTTTAA ...:.xx:.......x:................::...........:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 59512374 NA +3728 chr4 + 190214555 83578800 83578799 83578957 158 CCACTTAGACTTGACTTCTGAAAAAGAGAACCTA-ATAATCATTCAAGAACTTACTTTTTTCCTTCCTTCCTTCCTTCCCTCCCTTCCCTCCCTCCCTCTTTCTTT-----TCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCT chr4 + 94230402 27101842 27101841 27102005 27101842 27101841 27102005 164 CCATTTATACCTGATGTTTAGGAAACAGTGATTATATAGATTGTCATTAATATTAGTTGCTCCTACTTTCTCTACTTCCCTACCTCCTCCCACTCCCCTTCTTTTTAATAATTATTTTTCTTCTTGCTTTTCATTTTGGTTTGCTGCTGTTGTTTGTTTTTACT ...:...x..:...:x.:.:::...x..x:x:..-...:x:xx...xx..:x.xxx..x:....x.:...::.x.......x...:.:.:.x.....::.:.:...-----.:x........:..x......x..:.xx:..x..x:.x..x.:.x..:..x.. 34M1I71M5I53M 98/158 62.0% 164/94230402 0.0% 6/158 3.8% 56476958 NA +3824 chr4 + 190214555 83578834 83578833 83579024 191 ATAATCATTCAAGAACTTACTTTTTTCCTTCCTTCCTTCCTTCCCTCCCTTCCCTCCC----TCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTT---CTTTCTTTCTTTCT---------TTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCC-----TTCCTTCCTTCCTTCTTTCCCTTTCTT chr4 + 94230402 61081191 61081190 61081399 61081191 61081190 61081399 209 ATGAATATTAAAAAA---ACTCTTTTCTAATTCTCTTTTTATGCCTTCTTCTCCCCTCAGATTTCCTTTGCCTAATCTTATTTCTGTTCTTTTTTCTTACTACTTTGCCTCTATTTCCTTCTAAACTAACCTGCTTTCCCATCACCTGCTCTATTCTGCACTAATTTATTTTTCATTTCCAGCAGTTCCTTCCTCCCTTCTAGCCCTCACTT ..:.x:...x..:..---...:.....:xx:::..:..::x.x...:.:.::..:.:.----.:...:.x:..xx....x.....x..:.:.......x..x::..x.:.:.x...:...:.---..xx.:.x.....:---------:...x.::.x.x:.xx..:x..::.:x:....-----.........:......xx....:x... 15M3D40M4I60M3I14M9I32M5I27M 119/188 63.3% 209/94230402 0.0% 24/188 12.8% 22497643 NA +4198 chr4 + 190214555 83578849 83578848 83578986 138 CTTACTTTTTTCCTTCCTTCCTTCCTTCCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTT--TCTTTTTTCTTTTCTTTCTTTCTTT----CTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 50176274 50176273 50176414 50176274 50176273 50176414 141 CTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTT--TGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT-TCTTTCTCCTCCATTCTT ..:...x:.:.....:.......:x.:.x.:.x...:--.x.x.:x:.......x......x.--..x.....x.:.............:----.::x:..:::.x...::..x.:..:......-.:.:.:..:.:.x..... 37M2D24M2I25M4I31M1D18M 93/135 68.9% 141/94230402 0.0% 9/135 6.7% 33402575 NA +4029 chr4 + 190214555 83578850 83578849 83578997 148 TTACTTTTTTCCTTC-CTTCCTTCCTTCCC-----TCCCTTCCCTCCCTCCCTCTTT---------------------CTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCC chr4 + 94230402 40375385 40375384 40375559 40375385 40375384 40375559 175 TTGCTTTTTTCCCTCTCCTCCCTCCTTCTCCGTGttcttttctttttttcttttttttttttttCCTTAGGGGGGGGGCTTTTCTTTTTTTTTTTTTTATCTTTCTCGTTCTGAGCTTTGTCGGCGGCTTTTTGTATCTTTTATTTTTCATTTTTTGCCGTCGTTCTTGTCCTCC ..:.........:..-.:...:......:.-----..::...::.:::..::.:...---------------------............:......:x.:.:.:..x....xxx:...x.:xx.xx:.:...x.x.....:x..:..:x...:..x.:x..x...:.x:.:... 15M1I14M5I22M21I97M 98/148 66.2% 175/94230402 0.0% 27/148 18.2% 43203465 NA +3752 chr4 + 190214555 83578872 83578871 83579039 168 CCTTCCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 64726422 64726421 64726585 64726422 64726421 64726585 164 CCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATT-CTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCT---TTTCCTTCCCTCTTTTT ...x.x:..:::.:.x...:.:x....xxx......xx..-....x:...x...:.:x.xx:...xxx.x.:.....x:.:x..x.:x:..x:x...:x.:.:....:....:x.xxxx.::..::......:..:x........:..---....:...::.....:. 40M1D107M3D17M 100/164 61.0% 164/94230402 0.0% 4/164 2.4% 18852450 NA +3033 chr4 + 190214555 83578875 83578874 83578987 113 TCCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTT chr4 + 94230402 68974688 68974687 68974805 68974688 68974687 68974805 118 TCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCATCTGTTCTAATTTTTGCAGCTTCTTT ..::.:.:x.:.:..xx.....:...:....:......:.x.x:::.::...x.::xx:......x.x.x....x:.:.::..x....:.:x...x.::.xx...:.-----...... 107M5I6M 69/113 61.1% 118/94230402 0.0% 5/113 4.4% 14604187 NA +3176 chr4 + 190214555 83578875 83578874 83578928 54 TCCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTT chr4 + 94230402 59557954 59557953 59558007 59557954 59557953 59558007 54 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT .::...x:....::........:...:.........::x...........:x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 24020921 NA +3235 chr4 + 190214555 83578876 83578875 83578948 73 CCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTT--CTTTTCTTTCTTTCTTTCTT---TTCTTTTCT chr4 + 94230402 35385251 35385250 35385328 35385251 35385250 35385328 78 CCCTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTTTAATGCTTAAATGCTTTTTT .......:....:...:....:...:....:.......:x...:--..:.::...:...xx.x...---.x.....:. 44M2I20M3I9M 55/73 75.3% 78/94230402 0.0% 5/73 6.8% 48193625 NA +3071 chr4 + 190214555 83578879 83578878 83578954 76 TCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTT chr4 + 94230402 39752768 39752767 39752843 39752768 39752767 39752843 76 TCCACTCCCTCCCCCCCGCTTTTTTTTTTTTTCTTTTAAACCTTTTGGCAACATCTTTCATTCTTTTACCTTTCTT ...x:........:...x....:....:....:.:..xxx:.....xx:xx:x......x..::...x.:...... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 43826111 NA +3028 chr4 + 190214555 83578882 83578881 83578931 50 CTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTT chr4 + 94230402 79176017 79176016 79176066 79176017 79176016 79176066 50 CTTCCCCCCCCCCCCCTTTTTTTTTTCTTTTTTCTTTCCTATCCATTCTT ......:...:...:....:....:.:....:.:...:..x.:.x..... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 4402865 NA +3231 chr4 + 190214555 83578885 83578884 83578963 79 CCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTT chr4 + 94230402 83244984 83244983 83245061 83244984 83244983 83245061 78 CCCTCCCTCCCTTTTTTTTTTCCTATTTTTTTTTCATTTTCTCTGTCTCCTG-TCGTGTTTTCTATACCCCATTTCATT ............:...:.....:.x...:.....:x......:.x.:..:.x-.:x.x......x.x.:::x....x.. 52M1D26M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 333901 NA +3034 chr4 + 190214555 83578887 83578886 83578984 98 CTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531213 30531212 30531310 30531213 30531212 30531310 98 CTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC ..x::..:........:..x.xx.....:x.::.x...:...x::x:xxx:...x..x:.x..x.:x.:.::...x.....:..:...:......... 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 53047674 NA +3525 chr4 + 190214555 83578902 83578901 83579037 136 TTTTCTTTTTTCTTTTTTCTTTTCTTTC-------TTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 27978820 27978819 27978962 27978820 27978819 27978962 143 TTTTTTTTTCTCTTGCTACTTTTGTTGCACTGATATGTTTTTAGTTATTTTTCTGTGCCTTAGCTCTCTTGACTTTCCTTTCCTTCCGTCTATGTGTTTTTTCTCTATATATGCCTTTTTTCCCCTACTTTCTCCTGTTCCCT ....:....:....x:.x.....x..x.-------.x.:...xx..x:......x.x.:..xx:...:.:xx::..:.....:...:x...x.x:x.::..:..::x.x:x.x....:......:.x......:::x...::. 28M7I108M 84/136 61.8% 143/94230402 0.0% 7/136 5.1% 55600082 NA +4024 chr4 + 190214555 83578902 83578901 83579105 204 TTTTCTTTTTTCTTT---TTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---CTTTCTTTCCTTCCTTC-----CTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-CTTTCTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792637 85792636 85792852 85792637 85792636 85792852 216 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTT---TCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ...:::.........---.x.........xx...---..x:x:.x....x....x.::.xxx..x::..:..:......:.---...x..:.:.x..x..x-----..:x:...x:.:.....:..:x::.:....:.x:---.x.:....x.x:......:::xxx..:x.....:.-..:.x::..x..xx........:...:.:.:....:.::. 15M3I16M3D44M3I17M5I34M3I35M1I40M 128/201 63.7% 216/94230402 0.0% 18/201 9.0% -2213735 -92016667 +3247 chr4 + 190214555 83578914 83578913 83578980 67 TTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 45957265 45957264 45957331 45957265 45957264 45957331 67 TTTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTC ............:...:.:......x:...x.:x:.x::.......x:::.:...x....:..:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 37621649 NA +3019 chr4 + 190214555 83578915 83578914 83578987 73 TTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 57372027 57372026 57372099 57372027 57372026 57372099 73 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT .............x:::::x.:..::.::.::....xx:.x..x.:.........:...::...x.....x.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 26206888 NA +4008 chr4 + 190214555 83578919 83578918 83579176 258 TCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCCTTCC--------TTCCTTCCTTCCTTCCTTCTTT---CCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC----TTCCTTCCTTTCTTTCTCCCTCCCTCCCTCTCTCTCTTTCTCTCTTTCTCTTTCTTT chr4 + 94230402 61286086 61286085 61286364 61286086 61286085 61286364 279 TCCTTATTTTCTTCAAGTCATTTCTTTTTTTTTTTTTTTTTAAACCTAAGAATCATTTCTTACTCTTCTCACTCTCTTCCACAGCCATTCTATTCCTTTAGTCCTTTGCTAAACCCCTTATTTCATTGCCCAGTTCTCTGTAACATCTTCCTCCTCTCTGCCTCCTCCAGTTGTCTGTTCTTTTCTGTCTTTCCTCCCATCTCCCACTCTCTCCTCTTCTGGTTCTGTCCTTATTAATTATCTGACAGCTTCTTCCTTCATACCCGTTCCACTATCTTT ..:..x:......:xxx..x........:....:...:...xxx:..-----.:x......x..:.::.:x:.::.....--------.::x......:xx.....:x:.---...:..x....x..x:::xx....:.x.xx.-.:.:::..:.:::.x.:.:..::xx..x.:.x...::...:x..:.....:..x..:::.x:..::....:::----...:x.....x:.xx:.x:..xx.xx.:...::..::x.x:.:x..:.x..x..... 47M5I28M8I22M3I31M1I73M4I57M 149/258 57.8% 279/94230402 0.0% 21/258 8.1% 22292833 NA +3250 chr4 + 190214555 83578919 83578918 83579071 153 TCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215414 19215413 19215566 19215414 19215413 19215566 153 TCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ..::::.:::....:...:....:xx....xx:xx......x..::...x......xxx....x.x..::.:xx....:..::x.:::.::.x.:x...:..xxxx::.:....xx:..:.....x:...x:x..:..::x.:..:.x.:... 153M 85/153 55.6% 153/94230402 0.0% 0/153 0.0% 64363505 NA +3595 chr4 + 190214555 83578922 83578921 83579109 188 TTTCTTTCTTTCTTTCT-TTTCTTTTCTTTTCTTTC------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTC---------CTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTT-------TCTTTCTTTCTTTCTTTC----TTTCTTTCTTT-CTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792637 85792636 85792852 85792637 85792636 85792852 216 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT .....:.:.......xx-.x.........xx:....------....x..::x....xxx..x.:.:....:..:..::xxx.:.x.::.:.x..---------..:x....x...::.:...:.x::.:....:.-------.:....x.x:......::----..:x.....:.-..:.x::..x.:xx.:......:...:.:.:....:.::. 17M1I18M6I52M9I32M7I18M4I11M1I40M 120/188 63.8% 216/94230402 0.0% 28/188 14.9% -2213715 -92016687 +3252 chr4 + 190214555 83578925 83578924 83579075 151 CTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 19215411 19215410 19215566 19215411 19215410 19215566 156 CCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .::..:::.:::.:...:....:....xx....-----......x..::...x......xxx....x.x:.::.:xx....:..::x.:::.:..x..x.:::..xxxx::.:....xx:..:.....x:...x:x..:..::x.:..:.x.:... 33M5I118M 86/151 57.0% 156/94230402 0.0% 5/151 3.3% 64363514 NA +4062 chr4 + 190214555 83578926 83578925 83579117 192 TTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTC-------TTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTT-------CCCTTTCTTTCTTTCTTTCTTTCTTTCTT---------TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCC-CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792637 85792636 85792852 85792637 85792636 85792852 216 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT .....:.:.......xxx.x.........xx...:-------....x..::x....xxx..x.:.:.......:..::xxx.:.x.::.:.x..x..-------:.x....x:.::....:...x:....:.:---------.:....x.x:......:::xxx..:x.....:.x:..:-.:..x..xx.:......:...:.:.:....:.::. 35M7I55M7I29M9I38M1I35M 121/192 63.0% 216/94230402 0.0% 24/192 12.5% -2213711 -92016691 +3712 chr4 + 190214555 83578936 83578935 83579059 124 TCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.x...:.:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx..:..x::.:xxx....:x:.:....x.xx......--...::.:.::..........:....:.x.:. 91M2D31M 76/122 62.3% 122/94230402 0.0% 2/122 1.6% 19881818 NA +3924 chr4 + 190214555 83579023 83579022 83579257 235 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT-----------TCCTTCCTTCCTTTCTTTCTCCCTCCCTCCCTCTCTCTCTTTCTCTCTTTCTC------TTTCTTTCCTTTCTTAATTTTTATTTCTTTCTCTCTCTCCCCTT----CCTTCCTTCCTTCCTTCTCTCCCTCTTTTCTCCCTTTCCCTTCC chr4 + 94230402 67728277 67728276 67728531 67728277 67728276 67728531 255 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGC-TTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCC .....x:..x....:....xx:.::..:x.......x.x.-..x.x:..:.:...:.....:.x.x:.....::x:x..:..:...x..:x:..-----------.x..x.:....::x::....x..:.xx.:.:.::...x:::....:x.:x.:.------x.:.xx....::...:::.::.x...:..:x..:x:....:.:.----:x......xx:...:.x..xx.:..:..x:x..::.x:x.:... 40M1D53M11I53M6I44M4I44M 135/234 57.7% 255/94230402 0.0% 22/234 9.4% 15850746 NA +15610 chr4 + 190214555 83581532 83581531 83581837 306 TTTTCTCATGTCCTGATGCTTTCTTT---TAAGGTATTATCCAAAGAGATGAGTCACCCATGGAAAAAGGGCTCTCTGGTCTACGAGGAAGGGACTTTGAGCTGTCTGACGTGTTTTATTTCTCCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGAGGAGCTAGTGTCATGGAATCTCCTCACAAGAACCAATGTAAATTTCCAGTACATCAGTCTGCGGCTCACTATGGTGTGGGTGCTGGGCGTCATAGTGCGCTATTGTGTCCTACTGCCTCTGAGGTAAG chr4 + 94230402 47980424 47980423 47980732 47980424 47980423 47980732 309 TTTATTCATATGGTTACCCTTTTCTTCCTTAAGGTATCATTGAAAGAGATGAAACGCCTATGGAGAAAGAAATCGCAGGTCTACATCGAATGGAGTTCCGATTCTCCGACATATTCTACTTCTGCAGAAAAGGATTTGAGGCCATTGTGGAAGATGAAGTCACTCAGAGGTTTTCCTCTGAAGAGCTGGTCTCCTGGAATCTCCTCACAAGGACTAATGTCAACTTCCACTACGTCAGCCTGAGGCTTACTGTTGTGTGGGTCATTGGGGTTATAGTGCGATACTGCTTCCTTCTGCCACTCCGGTAAG ...x:....:.xx.x.:x....::..---........:..:x..........:x.:..:.....:....::x..x.x.......:xx...x...x..:x:::.x..:...:.:..:..:....x..::..:.....x..:........:...........x..:..............x..:.....:..x..x.................:..:.....x..:.....x...:....:...x....:...:.x........xx.x..x..:........x..:..:x....x.....x..xx...... 26M3I280M 229/306 74.8% 309/94230402 0.0% 3/306 1.0% 35601108 NA +12061 chr4 + 190214555 83581559 83581558 83581883 325 AAGGTATTATCCAAAGAGATGAGTCACCCATGGAAAAAGGGCTCTCTGGTCTACGAGGAAGGGACTTTGAGCTGTCTGACGTGTTTTATTTCTCCAAGAAGGGATTGGAAGCCATTGTAGAAGATGAAGTGACCCAGAGGTTTTCCTCAGAGGAGCTAGTGTCATGGAATCTCCTCACAAGAACCAATGTAAATTTCCAGTACATCAGTCTGCGGCTCACTATGGTGTGGGTGCTGGGCGTCATAGTGCGCTATTGTGTCCTACTGCCTCTGAGGTAAGTCATATGCCTGGTAATTTGATGATA-CGCTTGACTCAGCTTTCTTTT chr4 + 94230402 47948308 47948307 47948628 47948308 47948307 47948628 321 AAGGGATCATCCAGAGAGAGGAAACCTCCATGGAAAAGGAGATTGCTGGCCAGCATAGGGGATACTTCAACCTTGCAGATGTTATGTACTTTGCCAAGAAGGGATGCGAGGCAGTTGCAGAAGATGAAGTCACACAGCGGTTCACCTCTGAGGAGCTGTTGTCCTGGAATCTCCTCAGCAGAACCAATGCCAACTTTCACCGTGTCAGCTGGCAACTGACCACTGTGTGGATCATTGGGATCTTAATCCGGTACTGTCTCCTGGTGCCTTTTCGGTGAGCCAAAT-----GTAATTTGTTGGGATTGCTTTTTTCATATTACTTTT ....x..:.....:.....x..:x.x:..........:.:.x.:x....:.x:.:x:.::.:x....::.x..xx.x..:..xx.x..:..:x............xx..:..x:...:............x..x...x....:x....x........:x....x.............xx..........:x..:..:..x::::....::x..::..x..:.:x......:.xx.x..x:..x..:.x..x..:...x....:x.....:.xx...:..:..x..-----........x..:x.-:....xx:...xx..x..... 285M5D14M1I21M 219/320 68.4% 321/94230402 0.0% 6/320 1.9% 35633251 NA +6484 chr4 + 190214555 83588173 83588172 83588306 134 CCAGAATGGCACAATAAAATGTTTCTATTTCCTTCAGCCTCAAAAACTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCGGATCTGTGTGCGAGCCCTCTCTGGTACCATTCATTATCATAACAAGTGAGTA chr4 + 94230402 47981726 47981725 47981858 47981726 47981725 47981858 133 CCAGCATGCCCCAGATGCCTGTGTCT-TCTCTTTCAGTCTGAAAAACTATCTGAGTGAAGTGGTGCACCTCACATGCTCCCGGATCCTTGTGAGAGCTCTGTCTGGAACTATCCATTACCATAACAAGTGAGCA ....x...x.x..:xx:xx...x...-.:..:.....:..x.......:x.........x....x..:..x..x....x.......:x....x....:..x.....x..:..:.....:.............:. 26M1D107M 101/133 75.9% 133/94230402 0.0% 1/133 0.8% 35606447 NA +3296 chr4 + 190214555 83588197 83588196 83588305 109 CTATTTCCTTCAGCCTCAAAAACTGGCTGAGTGAACTGGTCCATCTGACTTGCTGCCGGATC-TGTGTGCGAGCCCTCTCTGGTACCATTCATTATCATAACAAGTGAGT chr4 + 94230402 47949906 47949905 47950014 47949906 47949905 47950014 109 CTTTCCCTTCCAGGGTTAAACACTGGCTGAGTAACCAGGTTCAGCTGACATG-TGCTGCATTAGGTGTCCGATGTCTGAGTGGTCTTGTTCAATTCCACAACAGGTGAGT ..x.::.:.:...xx.:...x...........:.x.x...:..x.....x..-...:.x..:-x....x...xx:..xxx....x:::....x.x:..:....:...... 52M1D9M1I47M 73/108 67.6% 109/94230402 0.0% 2/108 1.9% 35638291 NA +3050 chr4 + 190214555 83589965 83589964 83590016 52 ACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCC chr4 + 94230402 76033208 76033207 76033259 76033208 76033207 76033259 52 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC ..x....:.............::........x.xx.x...x::......... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 7556757 NA +6110 chr4 + 190214555 83590188 83590187 83590301 114 TGTAATTGCAGGCAGTACAGACCCCAGAAGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCATTGATGTTTTAATCTTGACAACGGATGGATGTTATGCTATGGTAAGAGCA chr4 + 94230402 47950902 47950901 47951015 47950902 47950901 47951015 114 TGTTGTTACAGGGAAAACAGACCACAGAAAGGAGGCATCTGTGTAGCCAACCACACATCTCCACTAGATGTTCTAATCCTGGCTAGTGATGGATGCTATTCCTTGGTATGAGCA ...x:..:....x.:x.......x.....:........:.....x........:..x..:..xx.x......:.....:..:.x.xx........:...x.:x.....x..... 114M 87/114 76.3% 114/94230402 0.0% 0/114 0.0% 35639286 NA +6940 chr4 + 190214555 83590188 83590187 83590312 125 TGTAATTGCAGGCAGTACAGACCCCAGAAGGGAGGCATTTGTGTTGCCAACCATACTTCCCCCATTGATGTTTTAATCTTGACAACGGATGGATGTTATGCTATGGTAAGAGCAGCTCATTGATA chr4 + 94230402 47982064 47982063 47982188 47982064 47982063 47982188 125 TGTAATTACAGGGAGAACAAACCTCAGAAAGGAGGCATTTGCGTTGCCAACCACACATCACCCATAGATGCGATCATCTTGACCAACGATGGATGCTATGCAATGGTACGAGGAGACTGATGACA .......:....x..x...:...:.....:...........:...........:..x..x.....x....:xx.x........x.xx........:.....x......x...x..x:::x...:. 125M 97/125 77.6% 125/94230402 0.0% 0/125 0.0% 35608124 NA +6157 chr4 + 190214555 83594806 83594805 83594973 168 TGCCTTTTACGTTTTTTCCTTTTCTTATGCTACTTCTAGGTTGGCCAGGTTCATGGCGGCTTGATGGGAATTATTCAGAGAGCTATGGTCAAGGCTTGTCCTCATGTCTGGTTTGAACGCTCAGAAATGAAGGATCGACACCTGGTTACTAAGAGGTAAG-CAGTGAAA chr4 + 94230402 47951262 47951261 47951424 47951262 47951261 47951424 163 TGCCTTATAAGTATTTCAGTTTT----TGC--CTTGCAGGTTGGCCAGGTACATGGAGGGCTTCTGGGACTGATTCAGAAATCTTGCATGCAAACCAGTCAACATGTTTTGTTTGAACGTTCAGAAATGAAAGATCGTCATCTGGTGAGAAAAAGGTAGGATAGTGAGA ......x..x..x...:xx....----...--...x:.............x.....x..x:.xx.....x.x.......:.x..xxx:.xx.::.:x...xx.....:.x.........:...........:.....x..:.....x.xx..:.....:.-:.....:. 23M4D3M2D128M1I8M 119/162 73.5% 163/94230402 0.0% 7/162 4.3% 35643544 NA +8341 chr4 + 190214555 83594843 83594842 83594971 129 AGGTTGGCCAGGTTCATGGCGGCTTGATGGGAATTATTCAGAGAGCTATGGTCAAGGCTTGTCCTCATGTCTGGTTTGAACGCTCAGAAATGAAGGATCGACACCTGGTTACTAAGAGGTAAGCAGTGA chr4 + 94230402 47982567 47982566 47982695 47982567 47982566 47982695 129 AGGTTGGCCAAGTTCACGGTGGATTGATGGGAGTTATTCAAAGAGCCACCGTGAAGGCCTGTCCTCATGTCTGGTTTGAGCGCTCGGAAATTAAAGACCGCCATCTAGTGACAAAAAGGTGAGGTGTGA ..........:.....:..:..x.........:.......:.....:.:x..x.....:....................:.....:.....x..:..:..x..:..:..x..x..:....:..xx.... 129M 104/129 80.6% 129/94230402 0.0% 0/129 0.0% 35612276 NA +4296 chr4 + 190214555 83596842 83596841 83596920 79 CTTTTTTTTTCCATAGACTAAAAGAACATATTGCTGATAAGAAGAAACTACCCATACTAATTTTTCCTGAAGGTAAGAA chr4 + 94230402 47983822 47983821 47983900 47983822 47983821 47983900 79 CTTTTTGCTTCCCCAGACTCAGGGAACATGTGGCAGATAAGAACAAGCTTCCAATTTTAATTTTCCCAGAAGGTAAGAA ......x:....x:.....x.::......:.x..x........x..:..x..x..x:.......:..x........... 79M 61/79 77.2% 79/94230402 0.0% 0/79 0.0% 35613020 NA +5682 chr4 + 190214555 83597410 83597409 83597518 109 CTACCCTCACCCCCTTG-CAGGAACTTGCATCAACAATACTTCAGTCATGATGTTTAAAAAGGGGAGCTTTGAAATTGGAGGAACCATACATCCAGTTGCAATTAAGGTA chr4 + 94230402 47984287 47984286 47984396 47984287 47984286 47984396 110 CTAACTTTATTTTCTGGACAGGCACCTGTATAAACAATACATCTGTGATGATGTTCAAGAAGGGCAGCTTTGAAATAGGAGGGACAATCTATCCTGTTGCAATCAAGGTA ...x.:.:.::::..x.-....x..:..:..x........x..x..x........:..:.....x...........x.....:..x..x:....x........:...... 17M1I92M 84/109 77.1% 110/94230402 0.0% 1/109 0.9% 35613123 NA +6396 chr4 + 190214555 83597427 83597426 83597519 93 CAGGAACTTGCATCAACAATACTTCAGTCATGATGTTTAAAAAGGGGAGCTTTGAAATTGGAGGAACCATACATCCAGTTGCAATTAAGGTAA chr4 + 94230402 47954107 47954106 47954199 47954107 47954106 47954199 93 CAGGTACCTGCATAAACAACACGTCAGTTATGATGTTCAAGAAGGGAAGCTTTGAAGTAGGAGGGACCATCCATCCAGTAGCAATCAAGGTAA ....x..:.....x.....:..x.....:........:..:.....:.........:.x.....:.....x........x.....:....... 93M 78/93 83.9% 93/94230402 0.0% 0/93 0.0% 35643320 NA +11388 chr4 + 190214555 83598028 83598027 83598728 701 AGATGTATTTTCTTTTTTCT------------------CAGTATAACCCTCAGTTCGGTGATGCATTTTGGAACAGTAGTAAATACAACATGGTGAGCTACCTGCTTCGAATGATGACCAGCTGGGCCATCGTCTGTGACGTGTGGTACATGCCCCCCATGACCAGAGAGGT---------ATTCCTT--AGCTAACACTTTATCTAATCAGGTAGAGGCAAGGAGATCTTCACCTGAAAATCTGGGTGTCTCCCTTCTCCATGTCATGCTTTTC----TGCTTTCT-CAGCAA----ATGGGTCATTTTTTTAATGA-----TGTATTTAGCTCACTTTAAATCAGACCATTTT--ATATTGAGAGATTATTTTC------CACGATG--GTTTTATAATTGCTGTTGGTTTATTGAACCTAC----------AGATATTATCTTGGGTAAG-----------ACTAATAAAGAGCGTAATAAATATATGCACATG----GTAAAAAATTAAACAATACAACACTGCATTTTCTTTATAGAACAAATGATATTTGCTATGATTGATTAAGAATAGAAAGCATTTGAGCTGAA----------ATATGAATCTTA---TATTTTAAAACAAATA---------CAAATGATTATGAGATGGTATTAAAAACTCGA---TAACTAAGATATTCTTGCA---ATTTTTTTTTTTTTTAAACC----------------AGGAAGGAGAAGATGCAGTCCAGTTTGCTAACAGGGTTAAGTCTGCTATTGCTATACAAGGAGGCCTGACTGAACTTCCCTGGTAAG chr4 + 94230402 47984612 47984611 47985384 47984612 47984611 47985384 773 AGGAGTGTTTTCATCTTTCTTTTACCTGTGATCCCTTGCAGTATGACCCTCAGTTTGGAGATGCATTCTGGAACAGCAGCAAATACAACATTGTCAGCTACCTGCTGCGAATAATGACCAGCTGGGCCATTGTTTGCCACGTGTGGTACATGCCACCAATGGTTAGAAAGGTAAGAGCATCATTGTTTGCAAGTGTCTCTTTGTCC---------------------TCTTCTCCAAAA-------------CCCCTGTCCACTCCATGTTTCCCAAAATGTTTTGTACAGGGCTTTTATTGGTGGTTAGTTTAACAAATGATTGGACTTAGCT---TTT---CCAGATGTATTGAAATATTGGGAGAATCTCTGCTGAATGTAGAATGCAGCTTGAT-ACTACCATTGCTGTACTAAAGATGCAAATAGCGGTAAATATACTGCTGTATATGATAGCATTGCTACTAATGCAAGCTGTAGTCAATG-ATGCATTTGTAGCTTAAAACCTTATCCCCTCTGTTAATCCATGCT-TTTGGAGCAAAACTTCCCTTAACTTCAAT--ACTCTGGATAAAAA-----TGAGCTAAATGTTTATCCTATAGAAACCTCAGGTTATGTTGGCATGAGGAGGGTGGGATTACTTGGTACAGAGTTAATTTGAAGCAGACGACTGTAATGGAGGTCTGTTTGAATTTACTTCTCTCTGTTTTGATTCAACTTACAACACTCAAAGGAAGGAGAAGACGCTGTTCAGTTTGCCAATAGAGTCAGGTCAGCCATTGCTCGCCAAGGGGGACTGACTGAACTTCCCTGGTAAG ..:x..:.....x.:.....------------------......:..........:..x........:........:..:...........x..x...........x.....:.................:..:..:x................x..x...:::...:....---------...x:..--.:x.:x.x....:..:---------------------.....x..x:..-------------...:.x....:x:....:..::.----..:...x.-...x:x----..x...x:..xx.....::.-----..x.:......---...---:....:xxx..x--......:....x.x.:.x.------:.x:...--.:..x..-.:.:.::...x.x..:.:..xx.:.----------.:....xx.x:..x:..x.-----------......:x.::x:...:.x...:-.....:x..----x.....xx...xx.xx.x::x:.x.x...x:.-...:x..x.x..x.xx:x..x:..x::..--.:.xx.:...:...-----......:..----------...x:..:..:.---...x..::x.::.:x.---------:.xx..:.xxx...x.::.x.x..:x.xx...---...:x:..:.x.x:...x.---.:..:.:.:.x....:.x:.----------------.............:..x..:........:..:..:..:.:...x..:......xxx.....:..x...................... 20M18I134M9I7M2I16M21D12M13D23M4I8M1I6M4I20M5I11M3D3M3D12M2I19M6I7M2I7M1D25M10I19M11I23M1D9M4I32M1D29M2D14M5D9M10I12M3I16M9I32M3I19M3I20M16I87M 451/651 69.3% 773/94230402 0.0% 172/651 26.4% 35613416 NA +5393 chr4 + 190214555 83598641 83598640 83598730 90 CAGGAAGGAGAAGATGCAGTCCAGTTTGCTAACAGGGTTAAGTCTGCTATTGCTATACAAGGAGGCCTGACTGAACTTCCCTGGTAAGAG chr4 + 94230402 47956922 47956921 47957011 47956922 47956921 47957011 90 CAGGAAGAAGAAGATGCTGTTCACTTTGCTGACAGAGTCAAGGCTGTCATTGCTGCTCAGGGAGGAATGTCTGTACTTCCATGGTAAGAG .......:.........x..:..x......:....:..:...x...::......::x..:.....xx..x...x......x......... 90M 71/90 78.9% 90/94230402 0.0% 0/90 0.0% 35641719 NA +3087 chr4 + 190214555 83604053 83604052 83604091 39 TCAATCCAGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAG chr4 + 94230402 43231800 43231799 43231838 43231800 43231799 43231838 39 TCAAGCCAGTTTTTGTTTGTTTCTTTGTTTGTTTTTAAG ....x.................x.............:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 40372253 NA +4375 chr4 + 190214555 83604650 83604649 83604767 118 TTGTCTTTCTGTTTGCAGGGATGGAGGACTAAAGAGAGCAAAGGTGAAGGACATCTTTAAGGAAGAGCAGCAGAAAAATTACAGCAAGAT---------------GATTGTGGGCAATGGATCTCTCAGCTAA chr4 + 94230402 47957456 47957455 47957587 47957456 47957455 47957587 132 TTATCTGTATATTT-CAGGGATGGAGGACTGAAAAGAAAACAAGTCAAAGAGTCTTTCAAGGAAGAGCAACAGAAAAAGTATTGCCAGCTAGTGACATAAAATGGGTTTGTGGGAAATGGAAATGTTTACTAA ..:...x.x.:...-...............:..:...:x.x.:..x..:..xx::..:...........:........x..:x..x..x.---------------.x.......x......xx.x.:x:.... 14M1D75M15I28M 86/117 73.5% 132/94230402 0.0% 16/117 13.7% 35647194 NA +6420 chr4 + 190214555 83604653 83604652 83604757 105 TCTTTCTGT-TTGCAGGGATGGAGGACTAAAGAGAGCAAAGGTGAAGGACATCTTTAAGGAAGAGCAGCAGAAAAATTACAGCAAGATGATTGTGGGCAATGGATC chr4 + 94230402 47985948 47985947 47986053 47985948 47985947 47986053 106 TCTTTCTCTGTTGCAGGGATGGAGGTCTGAAACGAGCCAAAGTGAAAGATAGTTTCAAGGAAGAACAACAGAAAAACTACAGCAAGATGTTAGTGAGAAATGGATC .......x.-...............x..:..:x....x..:.....:..:.x:..:........:..:........:............x.x...:.x........ 9M1I96M 86/105 81.9% 106/94230402 0.0% 1/105 1.0% 35618705 NA +4010 chr4 + 190214555 83608899 83608898 83608972 74 GTACACCTGTAATTTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x....:..:..........::........x.xx.x...x.............:..x.xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 7575695 NA +3000 chr4 + 190214555 83616828 83616827 83616885 58 TGGATTATTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTGAGATGGAGTTTCGCT chr4 + 94230402 90152625 90152624 90152682 90152625 90152624 90152682 58 TGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ..::::...::.::....:.:....:..x.............x...x.:.:....:.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -6535797 -87694605 +3513 chr4 + 190214555 83628798 83628797 83628871 74 GTGCACGTGTAGTTCCAGCTACTCAGGAGGTTGAGGCAGGAGAATGGTTTGAACCTGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......................::::...:....x.xx.x...xx::.......::.:..x:xx:..:..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 7595594 NA +3366 chr4 + 190214555 83634139 83634138 83634230 92 AAAAAAAAAAAAAAAAAAGTAGAAATTCTTTTTTTAAAAAAATAGTTAATAACAATGTATTTTATTCCTTAAAGGGTTTTTAATATTTTCAA chr4 + 94230402 6204090 6204089 6204171 6204090 6204089 6204171 82 AAAGAAAAAAAAAATAAACTTGAAATTCTTTTTTGAGAAAAATAATTACTATTAAATTCATATATGCATAA----------AATATTTTCAA ...:..........x...x.x.............x.:.......:...x..x:..xx.xx.x...x.x.x.----------........... 71M10D11M 64/82 78.0% 82/94230402 0.0% 10/82 12.2% 77430049 NA +3515 chr4 + 190214555 83643206 83643205 83643347 142 ACAATGAATTGTGCACATTCTACTGGGGACTTCCTTCCTTTCCTTTCC-------TTCCTTTCCTTCCTT-TCCTTCCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTCCTTCCTTCTCTCTCTTTTCTTTTCTTT chr4 + 94230402 63697091 63697090 63697239 63697091 63697090 63697239 149 ATATTTAAATGTGAGTACTCCAC---AGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.x.x..x....x::.:..:..---:.....:x.....:........-------.::....::.....:-.:....:x....xx..:..x::.:xxx....:x:.::...x:--..:...::...:::...:...:....:::....x... 23M3D22M7I15M1I42M2I37M 89/139 64.0% 149/94230402 0.0% 13/139 9.4% 19946115 NA +4620 chr4 + 190214555 83646751 83646750 83646935 185 TTTCCTGTGTGAT-TCTCAGCCTGCCAGCTCAAGTGAAGTGAGGAACAGCTTCTCTTCATATGCCATGCACAATATGGGAGCACAGCAGCTTTTGCTGCTGATGAAAATATTATGGCCTCAGTTCTCTGTAATCAATTTACTGCTTTATGGACCCAAAGTCCTCCAGAGAATTTAATAAATTCACA chr4 + 94230402 52867814 52867813 52867989 52867814 52867813 52867989 176 TTTCCTGTTTGAGATTTCAGATTACTGGTCTGGAGAAAATGGG---CAGGTTGCCTCTATATTATATGAACA-----GCAGAATAGGATCCTCT--CACAGATGAAAGTACTATATTTGCGTCTCATTATAATCCATTCGTTGCTTCATGGACTCAGAGCCCTCCAGGGAGTGCCACAAACTCACA ........x...x-.:....x:.:.::.::::::x:..:..:.---...x..x:..::....xx:...x...-----.x..x.:..x.x.:.:.--::.x.......:..:...:x::x.:x:..x:.:.....x...:::.....:......:..:..:.......:..:.x:x.:...:..... 13M1I29M3D26M5D17M2D90M 110/175 62.9% 176/94230402 0.0% 11/175 6.3% 30778937 NA +5612 chr4 + 190214555 83646877 83646876 83647085 209 TGTAATCAATTTACTGCTTTATGGACCCAAAGTCCTCCAGAGAATTTAATAAATTCACATAATGTTTCTAAGTGCTGCATTGTGCATTTGGAGCGCTGATTTAGCTGACAAATGTG-AAAAATTCGTGTAGCTAGACAACTCCCTAGTGATTAGACATGTGTGGAAGCTAAAGAGACCACGTTGCTCCAGAGAAGGTCAGCATTAACATA chr4 + 94230402 36951777 36951776 36951985 36951777 36951776 36951985 209 TGTAATTGATGCATTGGTTTATATACCCAAAGTCCTTTAGAGGGTGCCACAAATATTTATGAAGTCTTTGAGCATTTAATTTTACA-CCAGATCTGTAAATTAACTGAAAGATGTGTAAAAATTCATACAGTGAGACAGCTCCCTCCTGGCTACATACACGAAGTGCCTCAGGAGCGTAAATTATTTCTGCTGAGGTCAATCTTAATTTA ......::..x:.:..x.....:x............::....::.x:x.:....x:x:..:.x..:.:.:..:::.xx...x.:..-:::..x.xx.:.x...:....x.:.....-........:.::..:x.....:......xx..::..x.:.:::.x:.x:x..x.:...xx:.x:..::.:.x.xx:......::x....:x.. 86M1D29M1I93M 126/208 60.6% 209/94230402 0.0% 2/208 1.0% 46695100 NA +19899 chr4 + 190214555 83650552 83650551 83651010 459 TTTGGTTGCTGTCATTCCTCATAAGTATGTCTCCACACTTGTCAGGTCAAATCTGCTGTCAATTGAAATACATAAAATGCATATCTCTGTATGTATACATATTTTTCATTTTC-TAAAATGAACATCATAAAAA---CAGAAACATGACCTACAAAGGCAGGATACAGACTCCAAATATTGTACAGCAGCTTCATTTTTTTATTAGATTTTCTG-TGTTTTCTTCCCCCCCAGTTGCTGGATAAAA---TCCATACAAATGAAATACTGGCTCACTCAGTAAATAATAATGAAAAGGTAAATTCATTTTACAGAGAAGCCAGTGCATGTAAGACATCATCTTGAATGACTGTGA-----TTTTCTTGAACTGATCACCAGGCTATTATAGTCTCTCAAGAATGATATCTGGTTTTTAGGTTCTCCAATTGTGCCTGCGACCTCTCCTTAACCCTTTGGCCCTTAAGAAACAT chr4 + 94230402 47991313 47991312 47991769 47991313 47991312 47991769 457 TTTTGGCACTGCTGCTCCT--GAAGAATGTCCTTGCCATCGCTAGACCTGATTTGTTGCCATCCAGAATGT------------TTTCCTTTTTTTTTTTTCCTTTCCATTTCCCTGCAATGAACATAATAAAAAATGCAGAAATGTGACCTCAGGAGTCAAGATACAGACTCCAATAATTGTTCACTGTCTCCATCTTTATATTAGATTTTCTGAGGCTGTTTTTTCCTCTATTTGCTGGAAAAAAAAATCCATACAAATGAAATACAAGCACAGTCAGTAAATAATAATGAAAAGGTAAATTCATTTTACAGACAAGCCAGTGCATGTAAGACATCATTTGGAATGATGGTGATGCTTTTTTGTTGCACAGATCACAAAGCTATTACAGTCTTTCAAAATTAATATCTGGCTTTTAGGCTCTATAATGGTGTGTATGACCTCTTCTT-ACCCTTTGGCTATTGAGAAAAAT ...x.x::...::::....--x...x.....::::.xx.:.::..::.x:..:..:..:..x::::...::------------.:..:x.x.x.x.x:x.x:...:.....:.-.:x.........x.......---......::......xx::..x..:..............xx.....x..x::x..:...:...x..............-x.:.x.:..::..:.:.x........x....---..................x:..x..x.......................................x........................:.x......:x....-----....x...x..x......x.:.......:.....:....:.x.:........:.......:...x:...x...:x.::.......:...-..........:x..:.....x.. 19M2D50M12D30M1I20M3I77M1I31M3I105M5I89M1D23M 334/444 75.2% 457/94230402 0.0% 28/444 6.3% 35659239 NA +3124 chr4 + 190214555 83652341 83652340 83652405 65 TTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATGAGATGGAGTCTT chr4 + 94230402 22915683 22915682 22915747 22915683 22915682 22915747 65 TCTTTTATTTATTTATCTACTTATTTCTGTATTAATAGCTTTGTCTTTTTAAGAGAAGAAGACTT .:..............:..:......x.x....x..xxx...:.:.x....x....x.:..x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 60736658 NA +18839 chr4 + 190214555 83664928 83664927 83665210 283 GCAGCTAGGGGCCAGGAGCAGCCCGCGGTTGGCTCT--CCTAGGA-------TCCTCTGCTGTGCT-GGAAGCAATTGCTGTGCATTTGTATGGCACACCATTTGCATACTCTAACGAGATGGGCTATAATTGGCCTTCATTGATTTTGTTTTCATTGAGCTAAAATAGAGTCAGAGCTTCTTAGGCTAGAAGAACTGATTGATTTGTGGTAGAATTCAGGACTATTCAGTTGAAGAAATAATTAATTATGTTCTTATTTAGTAATCATCAGGGTTCAGCCTGTTTCTTAGCA chr4 + 94230402 47996385 47996384 47996677 47996385 47996384 47996677 293 GCAGCTAGGGGCCAGTACCAGCTCACGTTTGCATTTTGCCTGACAAGCATATTTCTCAGCAGTGCCCTAAAGCAATAGCAGCTCATCTATATGGTGCACTATTTGCATACTCTAACGAGATGGGCTATAATTGGCCTTCATTGATTTTGTTTTCATTGAGCTAAAATAGAGTCAGAGCTTCTTAGGCAAGAAGAGCTGATTGATTTGTGGTAGGATTCAGGACTATTCAGTTGAAGAAATAATTAATTATGTTCTTATTTAGTAATTGTCAGGGTTTAAGTTTGCTCTTACCA ...............x.x....:.:..x...xx.:.--...::x.-------.:...x..x....:-x:.......x..x.:x...:.:.....::...:.......................................................................................x......:..................:....................................................::........:.:x:.xx:.....x.. 36M2I7M7I14M1I226M 244/283 86.2% 293/94230402 0.0% 10/283 3.5% 35668543 NA +32533 chr4 + 190214555 83676475 83676474 83677134 660 TTCATAATAATAATGCAAGACCAATCCTTTCCATCCTTCA--TTACTCTTTTCTCCATTCTTCTACTTTCTTAACTTCCTATCTTACCTCATAAAATGCTGAACACTCTGCAATGTACTGAAACAGTTGTTCTATAGAAGACCAGTATGCTCCAATGACTCTCAGTATTG-TATATCTTCATCAACCCTAAAAGAAGGCTGTGTTTGTGTTTGTGTGTGTGTGCACGTACCTCCACGCCGAGTTGAGAAACATGAATTAGGAGGAGGAATGATTAGGTGGTTGGGCTTCAAAGAGAACATTTGTAGATTCTATCTGGAACACATTTTATTAAAATTGCAACAAACTTTATAAAATCAGATGTATGGTTCATTAAGAGAACATTACCTTACAATCATGATTAATTAGATTAAACTTATGAAAGTGTGTTATTTGTTCAAATCAAAAG---GGTGGGGGAAGATGATGGATGATGAAAGAGTGTGATAAATGAAGAAAGCAGCTGAACTAAATTGAATGTGTATTCATCCGTTTTCACTTCATAACTAATGATAAATTGAGCATGTCACACTTAACAATACATATCTGGGCTTAAGCACACAGTTTCAGCTCCTGTTCACTAATGCCTTTTGATAGGTAGTTGAGACCAAAGAAT-TGAAATTTTAGTT chr4 + 94230402 48000750 48000749 48001350 48000750 48000749 48001350 601 TTCATAGAAGTAAGGTGTGAAAAATGTTT---GTTTTTTAATTTGCTTCTATTTCGATTAACTT--TTTTTCAACTGCACGTCTTGTCTCATAAAATGATGAACGCTTTCCAATTTATTGAAACAGTTGTTCTATAAAAGAGCAATATGCTTGAGCAACTTCTTGTACTGATACATCATCATCAACCTTAGTAA-----------------------TGAGTG----------------GGATAGAGAGATA-------------GGGATGCTT-------TTGGCTCCACTGAAAACATTTGTAGATTCTATCTGGAACAGATTTTATTAAAATTGCAACAAACTTTATAAAGCTCAATATACGCTTCATTAAGGGAACATTACCTTACAATTATGATTAATTAGATTAAACTTATGAAAGTATGTTATTTGTTCAAATCAAAAGGGTGGTGGGGAAGAATGATGGATGATGAAAGAGTGTGATAAATGAAGAAAGCAGCTGAACTAAATTGAATGTGTATTCATCCGTTTTCACTTCATAACTAATGATAAATTGAGCATGTCACATTTAACAATACATGTCTGAGCTTAAG--CACAGTCCCAGCTCCTGTGCTCTAATGTCTTTTGTCAGGTAGCTGCATCCAGGGGACATGATATTTTGTTT ......:x.:...x.::x..xx...x:..---:.::..:.--..:..::.x.:..x...xx::.--...:.:....x.x::....::...........x.....:..:.x....x..:..................:....x..:......:x.:::...:::x...:..-..:...x.........:..:x.:-----------------------..x...----------------.::.x....:.:.-------------..:...x..-------.x....:..xx..:..........................x...............................:::x:..:..:.x.........:.................:.............................:......................---.......:.::............................................................................................................:............:....:.......--......::..........x.x......:......x:......:..x:x...::.:.:-...x.....:x.. 29M3D8M2I22M2D104M1I23M23D6M16D13M13D9M7D165M3I145M2D57M1I13M 487/594 82.0% 601/94230402 0.0% 73/594 12.3% 35675725 NA +3644 chr4 + 190214555 83696310 83696309 83696392 83 CATGGTGACGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGAGGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...::....:--......:.........:.::........x.xx.x...x..........::.:..xxxx:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 7663113 NA +23252 chr4 + 190214555 83708661 83708660 83709230 570 AAAAGGAAAGACGCGCCTGGTTTCACGCTGAAATTCTTTGGAGTCTTTGGCTTGAAATAACA--TAAAAGACCTTTGT---TATTCAACCTGTGCATTCATCTATGCA-AGCACATCTCCTTAGGGAACTGCTTGAAAATGGGATTTTT--------GTGGCCTTCTCTCCCATTTGACTTTCTTTCCCCTCTCCTTTTCCCCCAT--CCACGTCCAGGTATCTATTAGTTCTCTCTCTTTCAATAACACTGTTCTGGCTGCATTGAAAGTACTTTTTAATGCAGGAGATGCACTTCAGGCATAACACCAGG-TCACTTTTTGAGTAATGTTTTATAGGATTGGTTAAACTTTAGCACCATAACTGTTGACTTTACAGGCCAGAAAAGAGACTCAAGAGTGTTACGTGCTGGATAATTTGTGCCTTACAATTTTGAAAAATCAAATTGAGATAAGGGTTTAATGTGCTTGAAAAAAGAAGCTGTCATCTATTTT------TGAGTCTTCTATGTTTAATAGACCTCAACATTTAAGATAAAATAATATCTTTTACATTAA-----TAAAGTTGCAGTAAATAACTGTATATAAAGGAA chr4 + 94230402 48007847 48007846 48008435 48007847 48007846 48008435 589 AATATGAAAATTGCATCCAGCTTTACTGTTAAATTCACAAAGAACTCAGCTTTTGGGCAATTGTTAAAAGAGCTTTTTATCCTTCCAATCTGATCATCCACTCATCCACAATTTAGCTCCATGGGAAACCATTTGAAAAAAGCTTATTTCCCCCTGCTCTGTCGCCTCTCCCAAT--ACTCTCCTTTCCTTCTACCTCCCTCTCTTAACCTCATCTAGATACCTATTAG--CTTGCTCTTTCAATAACACTGCTCTGGCTTCCATGAAAGTGCTTTTTAATGTAGGAGATGTACTTCAGCCATAACACCAGGGTCACTTTCTGAGTAACATTTTATGGGATTGATTAAACTTTAACACCATAACTGTTGACTTTATAGGCCAAGGAAGAGACTC-TGAGTGCTAAGCTCTGGATAATTTGTGCTTCACAATTTTTTAAAATCAAATAGATATAAGAGTTTAATGTATTTGATA----AAGTAGCCCTCTATTTTTTTCCCTGTGTCTCCTATTTTAAAAGACCCCCAACATTTAACATGAAATAAAGTCTTTAACACTAATGAAGTAAAGTTATAGTAAATAACCATATTAAAAAAAA ..x.x....:x:..::.::.:..:..xx.x......x:x::::x..:x.x:..x::::..:x--.......x....x.---:x.:...:...xx...:..:::..x..-.::x:.x....x.:..:...:::.......x:.xx.x...--------x:x.:.x:........x.--...:..:..:..:...x.:.::.:.:.x.--..x.:..:..:..:.......--..:x.................:.......x.xx.......:..........:........:.......x............-.......:.......::......:......:..........:....................:......:::.........-x.....:..x.:x...............:.:........xx..........x..x.....:.........::....x.----...:x.:.x........------..x....:....x..x..x::x..:..........x..:......x:.....x...:...-----.......::..........::...xx...::.. 62M2I14M3I27M1I40M8I18M2D29M2I21M2D81M1I81M1D78M4D17M6I60M5I33M 414/561 73.8% 589/94230402 0.0% 37/561 6.6% 35700814 NA +87434 chr4 + 190214555 83723980 83723979 83725249 1270 CTTATTCCACCAGATTCATGTTTCAACTGTTAAACAAACAAAATGCCCACTGCATTGG-AAGAGGCATCTATTGCTTTGGTATCCATTTGATACCTTCCC------------TTGAAGCCAGGGAATTATATTGCTTGTGTGAAATAACTTTCCTTTTTTAGTTGTTCAATCTGATTCAAGGATTTTTGATTAACCATTCAGGGGCTATGAATAAATAAGAACCAGCAGTCCAGTAATTGGGACATCATTACTATCTAGTAGCACATTTAATACTCAACTTCACTCTGCTACATAACCTTTTCCTTCCGT------CTTCCTCCGTGATATTACCTCCTACCCGCAAAAGGCAGTGG--------------------TGTCATTGCAAGCTTCAGAAGTTAGCATTAAAATGAATACTTTTTAATTTCTTTGGATGAGATGGGGCTCTGGGCTCTGGGACAATGCTGATGGATGATGTTTTAATGCAGCTGAAATGTTATTTTTACTGAACCAGGGAAAACTATAAATTTTGCTTCATTGCCACTGATGGCTCTATGCATAAAACTATGGTGGCGCCCATCGGCCGTGAATAATCACCTCAGCACGGCAGATGTTACTTTGCGGGGAAAGCAATTCTTATGCCGAAGAATTGTGGAAAGATTAATTGTCTACAGCTGTTTCATGGCCCACAGCAATCTTGATACATTTATGATAAGTTTAAGAGCTCACTAGAGGCAGCTCCTATTCCCTGTTGTGAGAAGGGGGTGGGGGAAGAAGCCAGAGGCTTTATTTTGACACCTGGATTCATAGAATCTGTCAGCAACATTACAGCCTTCATAGAAATCCGGCAGTTGGCAGTTCTGAAATGATTGTGAGTGAGGTAAGATGCAGGAATTATCCATACGTAGATAAAGAAAAGGAGACTGAGAAGAATTATTCAAATTTGTGCAAATGAATTGCTTCCATTTTTCCTCCCTCTGCCAAGTGGAAATTGAACGTGACCCACTCTGACCTTTCTCTATTAAGTGCTGCAAATTGCAGTAAATGCACAGTTCTGAGTGCCCTAATGAGACAGAGCCCCAGGAATGCCTCATTAATAAGGGGAGTTTGACCTTGCTGGTCAGCCCTTCATTCGATATTGAAAAGAAATAAGAAAAAAGAAGAGATGACCCACTGTAAATTTTGAACAATACATTTGATTTAGTTTGCATATACTCCCAGCTAGACGCTTCGCAACCTTTCTCCCTCTCTGCTTCCCTTCAGCCACAGGCTAAGAAGATGGTACTTACCTTTTAGGCGCCAAGAGAAT chr4 + 94230402 48012800 48012799 48014090 48012800 48012799 48014090 1291 CCTACTCCTTTAAGCTAATGTTTTAAA----AGACTAAC------CCTACCACTCTGGCAAGAGCTGTGTCTTGCCTTTATATCCATTTGGCACCCTCTTGCTTTTTTTTTTTTTAAGCTGAAGAATTACATTATCTCTGTGAAATAACTTTCCTTCTTTAGTTGTTCAATTTGATTCAAGGATTTTTGATTAAGCGTTCAGGGGTTATGAATAAATAAGAACCAGCAGCCCAGTAATTGGTATATCATTACTCCCCAGTAGCACATTTAATCCTCAGCTTCGCTGCACCACGTAACCTTTTCCTTCAGTTCTCCGCCTCCTCCTCAATATTGCTTACAAA----AAAAGGAGGAGGGAAAAAAAAAAAAAAAGCAATGTCACTGCAAGCTTCACAAGTTAGCATTAAAATGAATACTTTTTAATTTCTCTGGATGAGATGGGGCCCTGTGCTCTGGGACAATGCTGATGGATGACATTTTAATGCAGCCGAAATGTTATTTTTACTGAACCAGGGAAAACTATAAATTTTGCTTCATTGCCACTGATGGCTCTATGCATAAAACTATGGTGGCGCCCATTGCCCATGAATAATCACCTCAGCATGGCAGATGTTACTTCGCAGAGAAAGCAATTCTTATGCCGAAGAATTGTGGAAAGATTAATTGTCTACAGCTGTTTCATGGCCCACAGCAATCTTGATACATTTATGATAAGTTTAAGAGCTCACTAGAGGCAGCTCCTATTCCCTGTTGTGAGTGAGGGGAAGGGG--GGAGCGAATGGCTTTCTTCTGACACCTGGATTCATAGAATCTGTCAGCTCCATTACGGCCTTCATAGAAAGCTGCCTGTTGGCAGGTTTGGGATGATTGTGAGTGGGCTAAGATGCAGGAATTATCTAGACATAGATAAAGAAAAGGAGACTGAGAAGAATTATTCAAATTTGTGCAAATGAATTGCTTCCATTTTTCCTCCCTCTGCCAAGTGGAAATTGAACGTAACCCGCTCTGACCTTTCTCTATTAAGTGCTGCAAATTGCAGTAAATGCATAGTTCTGAGTGCCCTAATGAGACAAAGCTCTAGCAATGCCTCATTAATAAGGAAAGTTTGACCTTGCTGGTCAGCCCTTCATTCGATATTGAAAAGAAATAGGAAAAAAGAAGAGATGACCTGCTGTAAATTTTGAACAATACCTTTGATTTAGTTTGTATATACTCCCAAGCAGACACTTCACAACCTTTTTTTCCCTTCCGTTTTTTGCTG-TACAAGTGAAGGAGG-AGTATTTACTTATTGGGTTCTCAGTTAAT .:..:...x::.:::.x......:..x----.:..x...------..:..::.x:...-.....x::.x.x....:..x:..........::...:..::------------..x....::::......:...:::.x..................:..............:......................x.:........:.......................:...........x.:.........x:.:...............x....:....:..x::.:..:..............x..------.:......x::.....:.:.x.x.x----......x:.x..--------------------.....:...........x..................................:...............:...x.........................::............:..........................................................................................:.x..:..................:..............:..:.:.....................................................................................................................................x::....x:....--.:...x.:x......x..:.............................xx......:.............x.:.x.x........x.:..::.............:.x..................:.x..:..............................................................................................:....:............................................:........................:...:.:..x..................::...............................................:...................::....................x..............:...........:x:....:....:........:.::.:..::xx..:::.x.x.-:...:.:x...:..:-:...:....:.x..:..:x.:x..xx... 27M4D8M6D13M1I41M12I198M6I25M4D12M20I394M2D490M1D15M1D29M 1088/1252 86.9% 1291/94230402 0.0% 57/1252 4.6% 35711180 NA +3285 chr4 + 190214555 83725367 83725366 83725496 130 TCTTGCTTTTCCTTCCTTCCTTC------CTTCCTTCCTTCCTTCCTT---CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCCCCTTCTCCTCTTCCCCCCTTCCCCCTCCCTCCCTTCCTCCCTTC chr4 + 94230402 708473 708472 708609 708473 708472 708609 137 TCTGGTTGTTACTTTCTTCCTTCAAGATGCTTGCT--CTTCCAGACTTAGCCCGTCACCCAGGACTGTGTTTTACCCTCCCTGCCTTCCCTCCTCCCCTCTCCCCATCTGCCTTTCCCCATCTGCCTTTCCATCCTCTC ...x.:.x..x...:........------...x..--.....xxx...---..x..x::.xxxx..x:x..::x:...:...x......:...:...:.....:.x..:x..:......x..:x:.::.:.x...::.. 23M6I6M2D11M3I88M 84/128 65.6% 137/94230402 0.0% 11/128 8.6% 83016894 NA +3379 chr4 + 190214555 83725499 83725498 83725552 54 CTCTTTCCCCCTTCCCTCCTTACTCCCTCTCTCTCTTCCCTCTTTCCTTCTTAC chr4 + 94230402 53459266 53459265 53459319 53459266 53459265 53459319 54 CTCTTTCCCTTTGCCCTCCTTTCTGCCTCTCCCTCCCCCCTTTTTTTTTCTTGC .........::.x........x..x......:...::....:...::.....:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 30266233 NA +3141 chr4 + 190214555 83727882 83727881 83727921 40 CCACACCTTGCTATTTTTTTTTTTTTTTGTATTTTTTCTG chr4 + 94230402 87970380 87970379 87970419 87970380 87970379 87970419 40 CCATACTTTGCTGGTTTTTTTTTTTTTTGTATTTTTTCTG ...:..:.....:x.......................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -4242498 -89987904 +3067 chr4 + 190214555 83735986 83735985 83736042 57 TCTATTTTTTTTCCTCCTTCTCTCCTCCCTTTCTTTTTTTTTTTTTTTTTTTGAGAT chr4 + 94230402 5672106 5672105 5672162 5672106 5672105 5672162 57 TTTGTTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGAT .:.:....:..x..:..::.:.:x.:.::...:...........x.:.......... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 78063880 NA +14249 chr4 + 190214555 83755949 83755948 83756386 438 TTTTTTTTTTGTATTACTAGTGGTTTAAGTGTATCTCTGTAAGGCTTCTAAAGCTATCTAGAAGTTAGGCAGAGTATAAATAAC-----------CGGTCATTATATGTAGCATTCACTCTGTTTTGCTGCCATTACTAAACCATTCAAGCAATGTTGTTGCAATGTGTAATATTAGCAGAAGACTCCCTGGGGAAGCATATAAGTGGATGTTTAATATTCTGCTTGTTTCTCAGTTCATCTCTTCACA-GCAGAGGTGTTAGAGCATGTTCAAAGTTCAGTTGAAAAAAA--GATAAAATCTACAGTATCAGAACACAGCAT----AAACATGC--TACTGTAATTCATAGAATTGCTTTTGCTTTAGCATTTTTGCTAAATTAGGAGATCATAAATTAGTTAAGTCAATCTGC--TCTTGAAATTTTTATTCCTTTTTAGATATTTTCAAATGAACAC chr4 + 94230402 48018791 48018790 48019237 48018791 48018790 48019237 447 TTTTAATACTGCAATGCCAGCATTTTAAGTGTATTTTTGTGAGGCCTCTAGAGTGCTGTCGTGGGTAGGCACCATATAAATAACATTTATTGTTATTATCATTGTATGTCGTATTCACTCTGTTTTGCTACCATTAATAAACCATTCAGACAATGTTGTTGCAATGTATAATATTAGCAACAGCCTCCTTTGGGAGACATATATCGGGGTACTTAATATTCTAGCTGTTTCCTGGGCCATCTCTCCACAGGCGCAGACACTGCAGTGTGTTCAAAGTTCAATATAAAAAAATGGGCTGGCTGTGCAA----AGATCACAGCATCCTACAGCACGCCTTGCTGTAACTCACGCCATGGCTGCTACTGTCCAAATGCTGCTATGCAGGATAATAGTAAATTAG-TGAGGCTGCCTGTTATTTTGAGA-----ATGCTGTTTTGG---TTTTAAAATGGCCAC ....xx.x:..:.x.:.:..::x...........:.:...:....:....:..:xx.x.x.x:.x......xx:..........-----------:x:.....:.....x.:.................:......x...........::.................:...........:x..x....:.x....::......xxx..:.::..........:x:......:::.x:.......:....-..:x..::::.:x..::.............:.xx.......--.::x::x.x.:..:----...x........----x.:..:..--.:......:...::xx..x...x:.:..x.xxx.x.x:.....x::x:.:x:..x:........-.:..x.x::...:--.:....:.-----..x.:x....:.---....x.....:x... 84M11I154M1I41M2I14M4D12M4I8M2I64M1D13M2I8M5D12M3D15M 297/425 69.9% 447/94230402 0.0% 35/425 8.2% 35737158 NA +18458 chr4 + 190214555 83767241 83767240 83767544 304 GAAGTTGCATTGTTGCCTACAGACAGGCATTCATTTCCTTTTCTTTTCTGGGCCATCCCTGTGTACAATTATTCTGATTAGGATGAGTAACAATGTGCTTCTGACTCCCATTGTATTGACAGTGTGC--AGAATTTTCCACTCAAGTGGCGCCAGTCATTACTTAGCCTCTCAGATATTGTGACAGGGAAGATCCATGCCTGCCAGTCAAGTATATCAATGACAAAGAGGGCTTAGACCCTGGCCACATACCTCTAAATTAAAGTAGTCAAAGTCATCTCCACTGGAAGATTATGAACCTCTTTTT chr4 + 94230402 48022351 48022350 48022655 48022351 48022350 48022655 305 GAAGTTGCATTGTTGCCAGCAGATAGGCATTCATTTCCTTTTAGTCCCTGC-CTCTCCCTGTGTACAATTACTGTGATCCCTATGAGTAACAATGTGCTTCTGACACCCGTTGTATTGACAGCTCGCCTAGTTTTTTCCACTCAAGTGGCACTAGTCATTACTTAAACACTTGGATATTTTGACAGGGAAGATCCATGCCTGCCAGTCAAGTCTATCAATGACAAGAGGGCCTTAGCCCCTGGATGCATACCTCTGAATTAAAGCAGTTAATGCCCTCGCTACTGCAATATGATATACCTTGTTTT .................x:....:..................xx.::...x-.:x................:.x....:xxx.......................x...:............:x:..--..xx.................:.:............:x.x..::......x................................x............:::..x.....x......x::.........:........:...:..x.:.x..x.:....x..x..x..:x....:x.... 51M1D75M2I177M 248/303 81.8% 305/94230402 0.0% 3/303 1.0% 35744890 NA +78279 chr4 + 190214555 83778946 83778945 83780008 1063 GAAGATGAGAGAGTGGCTTGAAGAAGGCATTGGGGATAGCTGCTATTTTTCTTCAGGTGTTTGATCTGACTGACGGCCCCCGTCTGAACTTCCTAGTCATTTGCCATTTCATTAGCTGCAAGGTTTTCAATTTCTGCCTCTTGGAAGTTACACCGCTTTGAACAAGTCCCCACAGTAATTGAATTTGCCACAGAAATAGAACACTGGAAAATTTCATTTTCTTCTTCCCTGCATGAAGGCAAGCAAGCAGGCAGGGCATACACATATTCCTGCTGGAATGCTCCTCTCTTCTTTCCTGGCTCCATTTCCCCTCCCTTCCCCCCATGCA--------TTCACTAATG--CTCACTCCTGTCCTGCTCCCAAGGCAGGTATACAGTCACACAAAAAAGGCCTGCTTTCAAATCATCTCAGAGTGCATCAGCCTGTCACTTTGTAATTTTCTTCTAAATGCCTTCCACAAATAATGGTTTTCAAAATGAGCATTAACAGGCTTGATTACATGAAATTGTCCTTTTAATTTACACCAGGATTCTATTGATCACACAAGTGCAGATTAAAGTGTTCAATGAAGCCCGTGATGAGGTATTAACCAGCTAAGGGTCCTCCAGGGGCCGCCAGGGA-GGCCAGGAATATGCTAGAAGTGTACAGTTATTTCCCCATAATGAAGTGGCACTATGCGAAGGCATGAATCGCTGGCAGGAAGAATAGATCGGAGATGATGAGCTCTTCAAAGTCATTTCTCCCTCACTCATTCAGCCTCATGCCCAGATCCTCTTGCGATTCTTCTGCATTACTTGTCATGAAATGCCAGGATTTACTTAGCCAGCTGATGCAATTTTTATGACCTTATTGCTTTTTCACCATGGTAATAGTTTTGAATCAATTTATCAATCCAGCGGTGCCATCAGACATATTGCCCTGAAGATCAAGTCCGGGTCATTCCATCAATTCACTGCGGTTTACGAAGATAGAGAAAAAAGCCAGGCCGTGTGGGCTATCAACTTCAAATGGCTTAGTAAACA---------TGCCTCGGCTGCTTTAACTGCTTCACTTCTGACTCCAGACCTTT chr4 + 94230402 48032643 48032642 48033694 48032643 48032642 48033694 1052 GAGGATGACAG-----CCTGTTGAAAACAGGAAGGAAGGC-GCTATTTTTCTCTAGGTGTTGGATCTGACTGACAGCCCCTGTCTTAACTTACTAGTGATTTGCCATTTCATTAGCTGCCAGGTTTTCAATTTCTACCTCTTGGAAGTTACACCGCTTTGAACAAGTCCCCGCAGTAATTGAATTTGCCACAGAAATAGAACACTGGAAAATTTCATTTTCTTC---CCGGCATGAAGGCAAGCGAGCGGGTG---------CACGTTCCTGCTGGACTGCTTCTTCTACCACCCCTCTACCTCTTCCTGCCTCCTTCCCCCATCACAGCGATATCTTTGCCGATGGGCCCCCACCAACCCCGCGCCCA-----------CAGTCACA--AGAAGGACCTCCTTTGGAATCGGCTCTGAGTGCATCAGCCTGTCGCTTTGTAATTTTCTTCGAAATGCCTTCCACAAATAATGGTTTTCAAAATGAGCATTAACAGGCTTGATTACATGAAATTGTCCTTTTAATTTACACCAGGATTCTATTGATCACACAAGTGCAGATTAAAGTGTTCAATGAAGCCCATGATGAGGTATTAACCAGCTAAGGGTCCTCCAGGGGCCGCCAGGGACGGCCAGGAATATGCTAGAAGTGTACAGTTATTTCCCCATAATGAAGTGGCACTATGCGAAGGCATGAATCGCTGGCAGGAAGAATAGATCGGAGATGATGAGCTCTTCAAAGTCATTTCTCGCTCACTCATTCAGCCTCATGCCCAGATCCTCTTGCGATTCTTCTGCATTACTTGTCATGAAATGCCAGGATTTACTTAGCCAGCTGATGCAATTTTTATGACCTTATTGCTTTTTCACCATGGTAATAGTTTTGAATCAATTTATCAATCCAGTGGTGCCATCAGACATATTGCCCTGAAGATCAAGTCCAGGTCATTCCATCAATTCACTGCGGTTTACGAAGATAGAGAAAAAAGCTGGGCCGTGTGGGCTATCAACTTCAAATGGCTTAGTAAACAtgctgctgctgctgctgctgctTTAACTGCTTCACTTCTGACTCCAGACTTTT ..:.....x..-----.:..xx...::..xx::...x:..-...........::.......x............:.....:....x.....x.....x.....................x...............:...................................:....................................................---..x..............:...:..::---------..::...........x....:..:::x:.x::...xxx:.:x..:.:x.::.........xx::..--------..::.::...--.:.x.x..x::..:..x....-----------........--.:..:.:...x....x:....:x...x.................:................x.................................................................................................................................:..............................................-.........................................................................................................................x.........................................................................................................................................................:....................................:...............................................::.......................................---------...:x.x.................................:... 11M5D24M1D183M3D26M9D66M8I10M2I21M11D8M2D238M1I401M9I44M 943/1032 91.4% 1052/94230402 0.0% 51/1032 4.9% 35746303 NA +21940 chr4 + 190214555 83786136 83786135 83786604 469 TTCCAGTCACGACACTTGCAATTTGGCTGGAAGATGTGAATAGTCCTTTCTGGACTA--CAAGCCCAACAGCTGTTCACATTTATACAGTAGGTTAAAATTTATATTT--AAAAAATAGTGGCTCATAAAGAAAGAATATGGAACAATGACAAC--TGCAAAAAAGAGATAATTGTATTCATGAAACATGAACTGGTGAGTGATACATT---TTTTTAAGCAAAACGTGTTGCAGCATTAAATAACGG------TGTCTTTAATTAATTCTGCCTAACATTAAAAGAATAAGGTCACTCATACCAAAAAATTGTTGAATAAAGCAAAAATGTGTGAAAGATATACTCTCTGATGTTACTCATAATGAAGAAGGGTTATCTACTGGTCAATCTACCACCATTATTTCTTAGTTAGAGGTATTACAGTTGAAAATAGACAATGGTTATAACAACCTAA----------TGTGATTAA-----CACAT-AAAATGTACTTTAT chr4 + 94230402 48034986 48034985 48035480 48034986 48034985 48035480 495 TTTTGGTCACAGTGCCAAACTTTCAGCTCCAGGCTGCTGGGAGTGCTGCCTGGACTATGCAAGTGTAACAGCTGTTCACGTTGGGAAAGCAGATTCAGATTTATACTGTAAAAAAATCGTGGCTCATAAA-AAAGAATATGGAACAATGACAACCCTGGAAAAAGGTAATAATTTAAGTTATGAAAAATTAATCAGGGAGAGATACATTATTTTTTTAAGCAAA---TGTTGCAGTAGGAAAAAAAAAACCTCATGGCTTTAATTAATTCTGCTTAACATTAATAGAATAAGGTCAGGCACACCAAAAA-CTGTTGAATAAAGCAAAACAGTGTGAAAGATATATTCTCTGATGTTATTCATAATGAAGAAGGGTTATCTTGTGGTCAATACAGCACCATTATTTCTAAGTTAGAGGTACAACTGCTGAAAATATACAGTGGCTATAACAACTTACCTAACCAGATTGTGAAAAAGGGTTCACATAAAAAAGTATTTTAT ..:::.....::::.:x:xxx..::...xx.:.x..:x::x...x..x:........--....:x:.............:..x:x.x..:..:..x.:.......:.x--.......x............-.......................--..x.....:.x:......xx.x.:......x..x..:::.x...x........---............---........:.xx...x..x::------..x................:.........x............xx..:........-:.................xx..............:............:......................xx........x:.x.............x...........:x..x.:........x...:...:.........:..x----------.....xx..-----.....-....x...:..... 57M2I49M2I20M1D23M2I53M3I12M3D21M6I55M1D146M10I9M5I5M1I14M 370/464 79.7% 495/94230402 0.0% 36/464 7.8% 35751150 NA +4811 chr4 + 190214555 83791911 83791910 83792071 161 TGTTTTCCGGTTTTCAGCTGGAGCTGGCAGTGCAAAGACTTTCAGAAA-ATAATTTTTCTATTTGTAAACTGAAGGAATGTGATATGGAAGTAAATGAGGAAGAATAAATATGGAGTGACACAGTATGGTTTT---ATAGTCACTTTTGGGGAGATGACTGTACT chr4 + 94230402 10788184 10788183 10788346 10788184 10788183 10788346 163 TGATTTCCAGAGCCCAGGCTGAGCTGGCAGAGCT--GGCAGGTAGAAATATCGTGTTTTGACTGGTAAACTGAGCAAATTTGACATGGAAACCACTGAGGGAGAATAAATATGGAACAACAAGATGTAATTTTTACAGAGGCTCTTTTCCAACCATAACTGTACT ..x.....:.xx::...x:x..........x..x--.:.xxx:.....-..x:.x...:x.:.x.........:x:...x...:......::x.x.....:..............:::...x::.:.::....---.x..x.x.....xx::xx..:........ 34M2D12M1I84M3I29M 107/159 67.3% 163/94230402 0.0% 6/159 3.8% 73003727 NA +4994 chr4 + 190214555 83799059 83799058 83799254 196 AATCAGTATT-CTTCTATGTTACCAGCAACCCTAGACTGATGGAGACTTTTTTTTTTTGTATGAATTCAGTTTAACATCAAAGTTCTAAAAGATGCATAGAATTCTGTGGCCAGCCCTTCAGGCTTAAATGCTCTGAT---CAGAGACAAAGGAGGCGCCTTTCC-------------------------TCTCATGGAGTCAGGAGAGGCACCACCATCTTTTT chr4 + 94230402 48040488 48040487 48040707 48040488 48040487 48040707 220 AATCAGTGTTTCCTTTCTGACAGCAGACGCCTTAGCCC--TGCCAACATGTTTTTACTGTGT--AGTCATTTCAACATCAAAGATCTAAATGATGCATAAGATTTCATGGCTAGCCCTGT-GATTTAAATGTTATGACTGATGGGGGCAGAAGAAATGCCTTTTCTTTTCACTGTGATAGTAGAAGAAAGTCTCACGTTGTATGGAAAGAAACGACCATTTGTTT .......:..-.:.:.x..x:.x...xx:..:...x.:--..xx:..x.x.....x:...:.--.x...x..:..........x......x........::...:::....:......x:-.::.......:.x...:---::.:.:..:.:..:::......:.-------------------------.....:.xx..xx...:..:x..x.....:.x... 10M1I27M2D22M2D56M1D17M3I24M25I35M 131/191 68.6% 220/94230402 0.0% 34/191 17.8% 35758571 NA +36225 chr4 + 190214555 83809652 83809651 83810330 679 AAATAAATGAGAGATTGCTTTATTCTTTT----CAGGCAGGATACATTCTGTGACCTATCTTTTCCGTGACCTACAAGGCTTTAGGGGAAGAGCTTCCAGAATTTTATTGGCAATGCCACTATTAGACGGACTTCCCTCTCTCTTTT----AAGCTCTTTGGGGGTCAGCTTTAAAGTGAGCATTAAGTGAATGGCTAATGGAATTAAGGGTATAATAATAGAAGGATATAGTGAGACAATTGTATTAACAAGAAATAAATCATGTTGAATGTAAGGTAAGTGTTTTTTAATTGATTGATGGGAAGGATGCTCCACAGGTTTTGTCAGGGACTAACAGCCATTTACCTTCTCATCTACAGTAAAAAGCCAAAATGTAGAAAAAAAGATAAGAAAATTATGCAGCAGGAAGATAAATTATTCAGAGAAGATGGCCATTTTGTGCTGACATCACTAATGTGAAAAGGCATTAAATCTTTGACACTAGCTTCATTCCTTAGGAGCTATGG-GGTTGAAATAACATTTTGTACTATAGATAAAAACTGAAATGTCTACTCTCAAGCTTTCTTCTGTGCCAGAAATGGCTTC-CAAGATGCCCAGATACTTGAAGACATAGTGGGTACTATGCTTTCCAAGTTGAAGCAAGTCTTGCACTTTG---AAAGCTAGTGGCTGTCTATATAATTATAACA chr4 + 94230402 48043030 48043029 48043697 48043030 48043029 48043697 668 AAATGAACGAAAAATAAATATTCTCCTGTAGAGCAAGCAGAATATGTTCTG-GATCTGTCTTTCCAGTGACCTACAGGATTTTAAGAGAAGAGCTTC-AGGATTTTATTGGCATTGCCACTATTATACGAACTTTTCTTTCTCTTCTCCCCAGACT-----GGGGTCAGCTTTAAGGAGAGCATTAAGTGAATGGCTAATGGAATTAAGGGTATAATAATAGAAGGATATAGTGAGACAATTGTATTAACAAGAAATAAATCATGTTGAGTGTAAGGTAAGTGTTTTTTAATTGATTGATGGGAAGGATGCTCCATAGGTTTTTTCGAGGACTAACAGCCGCTTGCCTTCCCATCTACAGTAAAAAGCCAAAAGGGA-AAAAAGAGATAAGAAAATTATGCAGTGGGGAGATAAATTATTCAGAGAAGATGGCCATTTTGCGCTGACATCACTAATGTGAAAAAGCATTAAATCTTTGACACCAGCTGCATTCCTCAGAGGTTGTAGTGGCTGAAACAA-----GGTATTAGAGATTACAGCTAGAA---CAGTGCTTCAACTTCCTTGGATGCCTTAAGTGGCTTTACAAGGTGATCCAGTAAGTAAAGGTGCATCAAGGGCCATGGGTACTGAGTT-------GTTTTG-ACTTTGTTTTACACTAGTGGCTTGATCTCTATTGGTAACA ....:..:..:.:..x:x.x.x:..:.x.----..:....:...::.....-..:..:.....:.x..........:.::....:.:..........-..:............x...........x...:....::..:......:.----.::..-----..............:.x...........................................................................................:.............................................:.......x..::............::..:.....:......................x.x.-.....:...................::..:................................:......................:..................:....x.......:..::.:.:.:.-..:.....:..-----x...:..x....x.x.:..::..---.x::x..:x.:...:...xx:....xx..:......:-....:..x:.x::..xx.:...::::.x:::.x:.:...xx.x.::....-------..:...-......---x.x:.........xxx.x.x..x.x:..... 29M4I18M1D45M1D49M4I5M5D216M1D129M1I11M5D23M3D37M1I50M7D6M1D6M3I31M 531/655 81.1% 668/94230402 0.0% 37/655 5.6% 35766622 NA +11048 chr4 + 190214555 83816242 83816241 83816558 317 TCTCAATATCTGGGTGTTACTAGATTGACTGTAGCCATTCTTAATT-TTTCTGACTACTTCAAAGTGTTATTTTCTGTGAGTTACTTTAGCTTTGCTATTAACTAAGAATTTCAGGCTGTCAATGCAATTTTGCCCATTAAAGACAATAACCCCAGTT-GGCTCTGAGGTACTATTTTTAGTTC-TCTTGTGAGATGACTCTCTATACATCTTTTGTATATATTGAATTATTCAAATTCATAGAATCATTTTTTGTCTAAAGGTCTTGATTTGTTGGGCTT--CTTAAGATTTTTACAGTTAATTCTAACTGCAGAGCTTTT chr4 + 94230402 48044958 48044957 48045272 48044958 48044957 48045272 315 TCCCATGATCAGCCTGTCATTGACTTGTCAGTAACCAATCATACCAATTTTTGACCATACCATACCGTCACTTGCTGTAAATTAATTTACTTTTGCCATTAACTACAGACACTGTGCGGTCAATGCAATTTTGTCCATTAAAGACAATAACCTTAGCCAAGCTCTTTGATGCTATTCTTAGTTCACCCCTTGGGACTACTCTACTTACATCTCCAG-AGGTACTGG------TAAATTTACATTATCATTTCTTGTCTAATATTCTTGATTTGTTGGCTTTTCTTTAATACATGCACAGTTAAATCTAAATGCAGAGCTTCT ..:..xx...x.xx...:.:.::x...x.x...:...x..x..x:x-...:....:.:x:..x.x:..:.:..x....:.:...x....x:.....:........x::.:x:::x..x...............:..................::..::-:.....xx.:.:.....:.......-:.::x..:..:x.....x:x.......::x.-.x:..:..:------:.....:.:.xx.......:........x:x..............x:..--:....x.:x.x:........x.....x..........:. 46M1I111M1I25M1I31M1D9M6D49M2I39M 216/310 69.7% 315/94230402 0.0% 12/310 3.9% 35771284 NA +78583 chr4 + 190214555 83829834 83829833 83830926 1093 TGATAATCATCGAGCCAG-CTATTATGAGCAGTATAAACAAATGACAAATCTCTGGGTGCAGGAAAGGTAACAAGAGGCTGATCAGTAGTTCTAGTTATCTTTCCTTCATGTTTATTGCAGTCTGGTGCAGTTATTTCTAAGGGCCTGACATTGATCGACAGCTTCTATTAAGGCCTATCCAGGGCAGCTGGATTGAACAGATACATTAAATAAAGCAGTTATTGCTTTTCATTGCCTTTCTGTAAAATATCACTGCTAAATAGCTTCTGCCATCAGATGCAGTTAGGTACATGGTTTTAATTTGAGGGACTGCTTTATAACACTGCACAATTGACACTGGCCTTTGTTTCCCCTACAATAATGATTGTGTACATCCTGGAGAATTGATGGGCTGTCCTTTGAGGTGGAGTTGGGAGGAGGCGAGGAGGAGGGAGCTCTGGCTTTGTTGTTCTCCCTCTCTTTTTATACATGCCAGGTTTGTCACTTGTTTGCAGCACTGGCAGGAACAATGTCAAGCGAGGGCCCTTATCTCAGGATGTTGTAATGTAGGGACTGTAAGCCTTTGCCTGGAAATGAGATAAGCGCAACCTTACAAGCATGGAGGAAG-ACAGGGGATGGGGGAGTGGTGGGTGCGTGATTGAGACAACAATGG-AAAGCTGTCAGGTTCCTGTTACAGCTCTTTCTGGTGCTACAGAAATATATGCATGTGGAATGGTGCATAACAAGCATGAAAATAAAAGTCTGGAATGTTCATCTAATAATGATGTATTTGGAGCAGGATTATGCTGCCCAATGATATTCTTGTTTTATCTCTGGGCTAAATGCTGGGGCAGCTGTGTGCTTTGGCACAGTCTTCTGTCCCTCCTTTTGTGTGCTGCATATTAATCCTTTATTGAAGTAATTAAATGTGTGCTTAATGGCAATGAGCTGGCAGAATGAACATACAATTGAATTAACAGTTATGATTGGGAGCATGCTACAAGATGAACTAAATGCAATTACTGTAGGCATTTCTTTCTCCAAGTCGAATCTGGCTACATGACATGACTTAATTAGAGCTTGTTAGATACACTTACTCCCTGATCCTCTAGTG chr4 + 94230402 48049881 48049880 48050965 48049881 48049880 48050965 1085 TGATAATCATCAACCCAGGCTATTATAAGCAGTACAAACAAATGACAAATCTCTGGGTGCAGGAA-GGTAACAAGAGGCTGATCAGTTGCTTTAGTTATCTTCCCTTCGTGTTTATTGCAGTCTGCTGCAGTTATTTCAAAGGCTGTGACATTGATCGACAGCTTCTATTAAGGCCCATCCAAGGCAGCTGGATTGAACAGATACATTAAATAAAGCAGTTATTGCTTTTCATTGCCTTTCCGTAAAATATCACTGCTAAATAGCTTCTGCCATCAGATGCAGTCAGGTACATGGTTTTAATTTGAGGGACTGCTTTATAACACTGCACAATTGACACTGGTCTTTGTTTCCCCTACAATAATGATTGTGTACATCCTGGAGAATTGATGAGCTGTCTTCTGAGGGTGGCGGGGGAGCTGGGGGGGGGGCAGCAGC-----CTTTGTTGTTCTCACTCTTTTTTTATACTTGCCATGCTTGTCAGTTGTTTGCAGCACAGACAGGAATAATGTCAAATGGGGCCCCTTATCTCAGGATGTTGTAATGTAGCTGCTGTAAGCCCTCGCCTGGAGACGAGATAAGAGCAACCTTACAAGCTTGGGGAGAGCAAAGAGGGGGGGCCAGCAGTG---CCACCGATGGGACAACAATGGCAGAGCTGTCACTCGCACATTATAACTCTTTCTGGTGCCAAGGAAATGTATGTGTGCTGACTGGTGAATAACAAGCATGAAAATAAAAGTCCCGAATGTTCATCTAATAATGATGTATTTGTAACAGGATTATACTGCCCAATGATATGCTTTCTTTATCTCCTCACTAAATGGTGGGGCAGCTGTGTGCTTTGGCACGGCGTGATGTCCTTTCTTTTGTGTGCTGCATATTAATCCTTTATTGAAGTAATTAAATGTGTGCTTAATGGCAATGAGCTGGCAGAATGAACGTACAATTGAATTAACAGTTATGATTGGGACCATGCTACAAGATGAACTAAATGCAATTACTGTAGGCATT--TTTCTCCAAGTCGAATCTGGCTACATGACATGACTTAATTACAGGTTGTTAGACACACTTACTCCCTGATCCCGCAGCG ...........:.x....-.......:.......:..............................-.....................x.:.:..........:.....:................x............x....x:x..............................:.....:..........................................................:..........................................:........................................................:................................................:......:.:.....xx.:xxx.....xx..x.:..:..x:.x...-----.............x....:.........x.....x.:......x.............x.:......:........::.:..x...........................xx:.........:.:.......:.:........x..............x...:.::..-.x..:..:x...xx..::...---x.::x:x..:...........-.:........xx:x.x::...:.:.............:.x:.....:....::..:x..x.....x........................:x............................x.:.........:..............x...x:........:xx:.......x........................:.:x.xx.....:.:.............................................................................:.............................x........................................--.........................................x..x........:..................:x:..:. 18M1I46M1D370M5D167M1I21M3D21M1I360M2D79M 957/1082 88.4% 1085/94230402 0.0% 14/1082 1.3% 35779953 NA +35468 chr4 + 190214555 83832157 83832156 83832651 495 TAAAATGTACATTTTGTTTTATTTTT-ATTTGAGCACAATAAGTCAGGACTTCTGGTCAGTGGGACCTCCTGGGTCTATTTTACAGCCTTCATTCTCTTTCTCAGGGCCATAAATGAAACCCTTTCAGCCCTAATGACCACAATGACTTTCCTCGATCACGTTATTGCTACTTTGGCACATTTATTGCTTTCACATGCACTAATGGATGAGTTTGGATATGTTAACAATTTATATATCATTTGATCCTAAAAAAGAAGCCCT-------ACCAAACTAACTTAGCCCCCACGATTGAGTAGCTTTTAAGGAGTATAAATGAATTTAATGCTTTAGAAAGAGCTTCTGTAAATTATGAACATGACACCTATTACATTAAGCTGCATTAAGCATTAATACATCTTCATTACTGGCAGGTTGCCCAAACCTCCAAGGTTGAAAAAGCTGCCTGAAAATGTTCAATGTGACAGTCACCTAGGCTGAGATTGATGGTTCCTTTTTTGG chr4 + 94230402 48052343 48052342 48052841 48052343 48052342 48052841 499 TGAAATGAAAAATGTGTTTTATTTTTTACTTTAACATTGTATGGCAAACCCTCTGGTCATCGGGGCTACTAAGGTTTATTTTATAGCCTTCGTCCTCTT---CGGGGCCATAAATGAAACCCTTTCAGCCCTAATGACCACAATGACTTTCCTCGATCATGTTATTGCTACTTTGGCACATTTATTGCTTTCACACGCACTAATGGATGAGTTTGGATATGTTAACAATTTATATATCATTTGATCCTAAAAAGAGCCCCCTCTCACCAACCAAACTAACTTAGCCCTGAGGATTGAGTAGCTTTTAAGGAGTATAAATGAATTTAATGCTTTAGAAAGAGCTTCGGTAAATTATGAACATGACACCTATTACATTAAGCTGCATTAAGCATTAATACATCTTCATTACTGGCAGGTTGCCCAAACCTCCAAGGTTGAAAAAGCTGCCTG-AAGTGCCCAACGTGGTACTCACCTGTGCTGAGATTGATCGCCTCCTTTTGGG .:.....x.x.x.x............-.:..x.:..:x:..x.x..::x.:........x:...:.:x.:x:...:.......:.......:.:.....---.:.......................................................:...................................:.........................................................:::xx....-------..................:x.x......................................................x........................................................................................................-..:..::...:...::.x......:x............x.:::.:....x.. 26M1I72M3D160M7I181M1D52M 435/491 88.6% 499/94230402 0.0% 12/491 2.4% 35779814 NA +32687 chr4 + 190214555 83851012 83851011 83851882 871 AATGTATGT-TTAATTA------TTTTACTTTTAGAAA------------ATGATGACTCTAACATT---GTTTAAATAAATTAACTCAATTCCTATT-ATTAGAAGCAAA-GTGTCTTGCATTTTACAGGTGCTGAGTCTGGTAGGAATGGATTAACCAGAGGCTC--------ATTAAATGTATCACCACTGTTGGCCAAACCATATAAACTCTTTGGAGTATGAGATGGTTCCAACCGTCTACTGTTGTGCATTAATAGTGGAGAGTGCCTCAGTGTATTTCCTTGTTTTGAATAAATTGTGGTATTAAATTCACAGCCTTCCTTCATCAGAAAGGGAAAATGATTTGACCTTCACATTCTTCAGAGCTGAACTCAAACTTTGGAGGCACACTTCAAAGCTCTGTAAATAATATGAGTAACACTTTGGACCCTTCTGG---------GGTGGGAGGGAAATTCCCTTTCTGAAGAACACCCAAGTCTTTAAAAAGAAATGGTCAGGTTTAAATATCTCACTATTTTTCTTGTTTGAGACTCCATGCTGAGGATTTTATTTTCCTTTGCAAAGCTTATGCTGCCCAAGCTGCTTTCTCAGAGGTCGGCTGGCGTTGGTGCTCAGGGCCTGCTTGCAGATTTCGCTGGAACAAGTTTATTTGTAGTATAGCCCGGGGCG-GGTTGAAGATTCCATTATGATGCGGGAGGCTCCCCTAGTTTGGAATATCAATGGCACTTCAAAGGGCTGGAGCTGTGAATTAGCAGCCAGGCTTCTTCTCAGGCCCTAGAATAGAATAAAATAACACGAAGAGATGTGTTTCAAGATAGAAAGAGTGGAGTATTTTCTTCTAGGGCTCTAATTGTAAAGTGGGCACTCCAAGTCTTCATGGATATCCTGGCGTCTCTCAGGG chr4 + 94230402 48056761 48056760 48057639 48056761 48056760 48057639 879 AATGCATGTGTTAATTAGACTCCTATTACTGTTACAAACCATCACTCAATACGATGATCCCAACTTTCAGACATAAGGCATGTCACTTTATTTTTATTTGTTAAGAGCAAGCGGTTCTTGCA--------ATGCTG---CTAATTTGCAGTGGCTAAACACCCTCTCTCTCTAAAATTGCATGTGTTTTTGGTGCAGGCTAAC-----TAAACTTTCTGACA---GTGGAGGTTTTAACTTCTGACTGTTGTAAATTAAG---GTAGGATTCCTCCACGCATTTCCATGTTTGGAATAAATGGCAGAACGAAATTTA--GCCTAATTTCCTCAGAAAGAGAAAATCAGTTGACCTTTGCATTCCTGAAAACAGAACTGAAAATTGGGAGGCTCACATCAAAGCTCTGTAAATAAAGTGAGTAACGCTTTGGACTCTTCTGGTGGAGAACAGAGGAGGGGGAAATTCCCTCTATAAAGAACACCCAAGTATTTAAAAAGAAATGGTTAGGTTTAAATATCTCACTGTTTTTCTTCTCCAGGGCTCCATGCTGAGGATTTTATTTTCCTTTGCAATGCTTATGCTG-CGGAGCCCTTTTCTCAGAGGTAGGCTGACGTTAGCACACTGAAGCAGCAAGCAGG-TTCACTGGAGCAAGTTTATTTGTAGTGTGGCCTGAGTCGCGTTTGAGGGTGCCATTATGATTCAGAAGGCTCCACAAGGTTTGAATATCAATGGTACATCAAAGGACTGTAGCTGTGAAGTACCAGACGTTCTCCCTCACAGGCCCCAGAATGGG-------GAGAGTGAGAGATGGGTTCAAAGTTGGGAAATGGGTAGGATTTT-TCCAAGGGCACTAACAGTCAAGTAGGCACCCCAGGTCTTTGTAAATGTGGTGGAGTCTTTCTGGG ....:....-.......------.x.....x...x...------------.:.....::.:...x..---::x...:xx.xx.x...:x...::....-:...::.....:-.xx.......--------:.....---..::.xx.x.xx.::...x..xxxx...--------...:x....:.:x:::x..:x...:..x-----......:.:..:x:---.x.:x....::...:x::x........:x.....x---.x..::.x....x::.:......x.....x........x.::.x.:x.....:.--....xx:...x........:......x.x........::.....:.x.:.:.x.....x...x..x......x...x..................x:........:........:.......---------.:x.:.:............:.x.:..............x................:..................:........x.::::.:................................x..........-.x:...:x:............x.....:....:.::.x.x.::x.x..xx....:-...:.....:................:.:...:.:.x..-.x....:.:.x..........x.:.:.......x.x..x..x............:..x.......:...x.........x..x...x.:xx..:.:..x.......:.....:.:-------:.x.xx:.......x...:x...x.:.:..:x.x.x..x.....-.:.x.....x....:x..x....:.....:...:.....::.::..:.xx...x....:..x... 9M1I7M6I15M12I17M3I28M1I12M1I10M8D6M3D28M8I28M5D14M3D35M3D54M2D122M9I134M1D55M1D39M1I115M7D44M1D65M 618/837 73.8% 879/94230402 0.0% 76/837 9.1% 35794251 NA +18656 chr4 + 190214555 83856760 83856759 83857215 456 TTTGCTTAATATAAAAAAACACCAAACCTT---GATATGACCAGTGCCAAGAAGAGTAACAA--AATAACTCTTCATGGTATATTTACCTTTTCATACCATCCATT------------------AGCCACTTTGTTTTATATGGCCAGCAGATGTTGGAACTTACAGCACCTACGAAGACAAGTTGATTCTTTATGGCTGCAGCCTGATCCCATCTCCATGGGATTTTA--TGTCCCCCTGCTGCCTTACTGGAGCCCCCACGCAATCTGTGCTCTTAGTTCATTAGTGCAGTCAGAGTCTGTGGTGGGTCTTAGATTCTCCATTCAAGAGGATCTGCTGGGCCTGCTTTGATAGTGCAGCCAAGCAACTGCTGGTTGCAATGTAAAAAATGCCAGAGGCTTCTTTTC-----TGTTTAGAAACATCATCTGAAAGCCCAATAGCAGAAGACAAGCACAGGTTTTCTTGCCATAAAACCTTAAAAA chr4 + 94230402 48061963 48061962 48062443 48061963 48061962 48062443 481 TTTTCATAAGCAAGAAAACTGCTGAACCTTCTCTATGGGTTCAGTGCCAAGAATAGTAACAGGGAAGAAGCCTT-ATAGTGTATTTACATGTTCACGTCATTCATTTGCGTAAACGCTTGTAGAAGCAGCTTTGATTTATATGGCCAGCAGATGTTGGAACTTGAAGCACCTGCTAAGAAAAGCAGATTCTTTATAGCCGTGGCCTAGTCCTGTCTCCACGGGCTTTTATTTTTCCCCTGGCCTCCTTGCTGTGG-CCCAGCAGTATCTGTGCGATTAGTTCATTTGTGCAGGCAGCGTTTGCGGTGGGTCTTGGATGCTCTGCTC-TGTGTATCTGCCAGGCCAGCTTTGATAATGCAGCCAAGCCACTGCTGGTTGAAATGTGAAAAATGCCAGAAGCTTCTTTTTCTGTGTGTACAGAATCAGC--CCAGGAGGCCTGTGACATGAAGAAAGCATAACTCGTTCTACTATACTGCTTAGAAAA ...x.x...xxx.:....x::.::......---x..:x.x:............x.......:--..x..x:...-..:..:.......x.x....:::...:....------------------...x:.....x............................:x.......:.x....x...:x..........:..:.::....::...::......:...x.....--.x.....:x..:x....:...x:.-...x:.:xx........xx..........x......x...x..:..:..........:...x...:::..-x.x.x......::....x.........:...........x...........x.....:............:.........:-----...x:....x..x.--.::::..x..x:.::..x:.::x.....:.:x.:x.::.:.:...xx:.:.x:.... 30M3I29M2I10M1D31M18I105M2I24M1D70M1D81M5I14M2D57M 332/451 73.6% 481/94230402 0.0% 35/451 7.8% 35794797 NA +3285 chr4 + 190214555 83862556 83862555 83862627 72 GCACGTGTAGTCCCAGCTACTCGGGAGGCTAAGGCATGAGAATTGCTTGGAACCGAGAGGTGAAAGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...........:.........:.::.....:..x.x..x...x::....:.x..:::..x.xx::.:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 7829350 NA +5871 chr4 + 190214555 83880089 83880088 83880322 234 GAACCCATCACATGACCTAGCCCCCACTGCATTTTC-TGGTACCACTTGCTTTTTGATTATGCAGAGAAGTAGCTGATCCCCAGATTATAGTGTTTACT------GTCTCCAACAGACATTAGCAATCTGTTGGAAAGATGCTAACAAAAGTAATCAATAGAGCAAAGAAAGATGAACCACTGAAAAGAATATAATTAGATGGTAGAAGTCACCTTAAATA-------TATTGTGGTTGCATAATTAT chr4 + 94230402 48069233 48069232 48069473 48069233 48069232 48069473 241 GAGCTCTGCGCCAGGCCGAGCACTCACTGCACTTTCCTGGAACTCTTTGCCTTTCAAATCGGCCAGCAAAGTGCTGA-CTCGGCACCACAGTGTTTGCTCCACCTGTCCTCATCAGGACTGCTTGAGCTGGGAGAAGGATGTTGACAAAAGCAATCAATAGAGTAAAGAATGATGAACCAATGGAAGGGATGCCACTG------AAAGGCCACCACAGAGACAACAGTCATGACGGTATCATAATTAT ..:.:.xx.:.xx.:..x...x.:.......:....-...x..:x:....:...::.x.xx..x::x..:xx.....-.:.x:x.::.:.......:..------...::..x...:xx.xxx::.x...xx:...:....:.:.......:...........:......x.........x..:..:.:..::x.:.:------.:.:.:....x:.:.x.-------:..x::...xx......... 36M1I40M1D21M6I93M6D17M7I20M 147/227 64.8% 241/94230402 0.0% 21/227 9.3% 35810856 NA +29763 chr4 + 190214555 83885806 83885805 83886202 397 TAGGTCAGAAAAGGACACAGAGAGAGATTGTGTGTCCTTGGTGGAGATGGGCTTGTGCTGAACTTGCAAAATGTATGAGTTCAGTGTCATCTGTTTTCAGTATTTCCTGAACAATTGATTTATTCCACATTATTAATGAACTTTGCAGCAGTTCCACTTGTCAGAGCCTACTCTGTAGGGGTCAATAATGAGAGGAAACCTGATGTTAGTGAATCCAGCTTAAGTGATTCTGTCATGCTAACAATTCAATATATCAGGACAAATGTCAGCTCCTTCCAATATGTTAATTCCTCTGATCCTATTTGCATAAACTACAGTCAATGAAATACAAGCTCCCCCTCTAAGGTAGTTAATGGAGATTTGTAAAGGATTTTTAA---TTTACTTTTTTTTGGTCTTC chr4 + 94230402 48071141 48071140 48071537 48071141 48071140 48071537 397 TAGGTCAGAAAAGGACATTTTTATA-ACTG-GTGTCCTTGATGGAAACTGATATGTGCTGAATTTGCAGAAAGCCTGAGTTCAGTGTCATCCGTTTTCAGTATTTCCCGAACAATTGATTTATTTCACATTATTAATGAACTTTGCAGCAGTTCCACTTGTCAG-GCCTACTCTGCAGGGGTCAATAATGAGAGGAAACCTGATGTTAGTGGATCCAGCTTAAGTGATTCTGTCATGCTAACGATTCAATATATCAGGACAAATGTCAGCTCCTTCCAATATGTTAATTCCTCTGATCCTATTTGCATAAACTACAGTCAATGAAATACAAGTTCCCTCTCCAGGATAGTTAATGGAGATTTGCAAAGGattttttattttttatttttttttaaGTTTC .................:xxxx.x.-.:..-.........:....:.:x.::x.........:.....:..x.:x................:...............:................:.......................................-..........:...................................:..............................:.........................................................................................:....:...:.:.:.................:...........x.---....:........::x:... 25M1D4M1D133M1D212M3I20M 357/394 90.6% 397/94230402 0.0% 6/394 1.5% 35814665 NA +3104 chr4 + 190214555 83890577 83890576 83890635 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAAAATTTATATCTATATCTAT chr4 + 94230402 33250994 33250993 33251052 33250994 33250993 33251052 59 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTAT ..x.x.x.x.............:.:.:............:.:...x.:.:.:.x.:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 50639583 NA +22304 chr4 + 190214555 83899978 83899977 83900414 437 AGTGTGTTAAAGTTTCTAGGGACAGAAAAGATAAGTGGCTGCTGCTTTGTTTTCTCTTGCTTCCTCTATATATGAAACCATTCCAATAGATCTGCAGGAAGAGATTTAGTTGCAGATGGCAGAGGTCAGTGTCTTGTGTATTCAATGTAGTCAATAATAAAGTCAGGACTTATGCTACCTGAATGTTAATAAGGAAGCACAAGGACCTTGGAAAGTCATTATGTCTGGTCATTTGCTTCATAATATTACT-CCAACAGGCTCAGGAGGCCAATGCAAGGAGATTTTTAAACAAGTAACAAGAAAAGG-CCAGAAAAATAAGGAAACAATTGAAATGTTGCAG----AAATTGTAAGGTTCATGTAATATACTACAGCTCGGCAGAAGGAGAATTTTAAAATGTAGTTTATGTGTAGCAGAGGGAATAGTATTATTTCTTATTG chr4 + 94230402 48072869 48072868 48073281 48072869 48072868 48073281 413 AGAGTGTTAAAGTTTCTCAAGACTAAAACTAAA----GCTACTGCTTTGTTTTCTTCCACTTCCTCTGTGTATGAAATCACTGTGATAGATCTGCAGGAAGAGATTTAGTTGCAGATGGCAGAGGTCAGTGTATTGTGTATTCAATGTAGTCAATAATAAAGTCAGGACTTATGCTAACTGAATGTTAATAAGGAATCACAAGGACCTTGGAAAGTCATTATATCTGGTCATTTGCTTCACAATATTGCTGCAAACAGGTTCTGGAGGCCAATGCACGGGGAT-----------TAAAAAGAAAAGGTCTGGACAAATAAGGGAAA------------GCAGCCTAAAAATAGAAGGCTTGCGTAAAGTGCACTAACCCATGGTAAAGACAATTTTCGAGTACAGT---TACATAGCAAAGGAAAGAGCGTTACTTCATGATG ..x..............x::...x:...xx.x.----...:..............::::........:.:.......:..:.x::...............................................x............................................x..................x.........................:.................:......:..-.x......:..x.............x..:...-----------...x.........-.::..x........:..x------------....----...x.:x....:.:::....x:.:.xx:.:.:.:xx:x..:..x......x:.:.::...---.:::.....:...:..x..::...:...x.:x.. 33M4D213M1I32M11D13M1I18M12D4M4I60M3D34M 330/407 81.1% 413/94230402 0.0% 36/407 8.8% 35827109 NA +31583 chr4 + 190214555 83919463 83919462 83919979 517 GGGGTGGAAATATTTAT--CCAAGAATAGACATGACGCCTTTTTGACAAGAGACAAATGTTTCATTCAAATGCTGCATTTCGCATATTGGAAACTGTAATGAATTTTTGTGCACCTCTCTACCTAGTTCACAATGTCAGGCCCAGGCATTGAAGCACCTCAGGCTTCCCTCACAAAATTAAATTTAATGCTATACCCTCCAGTAAAATGGTACATAAATCAAGCATTTGATTTGCATGGACTGCAGCAAGCAGCTCCGTTCTGGACAAATATAAACCCAACTCTGAATATTATGTCAGGGACAGGAACAAAGCAATCTAGGACTTCCAATAAAAGTCTGGTACCAAGGGTAATTCATGCTGGTATTA--CTGCTCT-GTGTTAAGCCTGTTATTAGAACTCTT--GTTTTAACCTCCTTTTTTCATTTCAAAAGAAAATGTTTTTTTTTTTTTTGACCTCCCTGTATTCAGAAAACCAGTGCACACTCAAACCAGTACTATTTATAAACTGGTATCTACTAGGA chr4 + 94230402 48079436 48079435 48079947 48079436 48079435 48079947 512 GGGGGAGAAATATTTTTTACAAAGAACAGACATTACTCCTTTTTGACAAGAGACAAATGTTTCATTCAAATGCTGCATTTCGCATATTGGAAATAGTAATGAATTCTTGTGCACCTTTCTCCCTAGTTCACAATGTCAGCCCCAGGCATAGAGGCACCTCAGGCTTTTCTTACAAAATTAAATTTAATGTTACACCCTCCGGTGGAATGATGCATAAATCAAGTGTTTGATTTGCATGGACTCTACTGAACAGCCCCGTTCTGTGCAAATATAAACCCAGCT-TGAATATTATGTCAGGGACAGGAAAAAAGCAATCTAGGGTTTCCAATGAGAGTCTGGTACAAAGTGTAATTCAGGCTGGTATTATGTTGGTCTCATGTCAAGGCTGTTATTACAATTCTTAGGTTTTGCTTCCTTTTTTTCATTTCAAAAGAAAATG-----TTTTTTTCTGACCTATTATGTTTTGGCAAACCAGTATGC------ACCAGTGCTGTTTATACCCTGTTGTCTGCGAGGA ....x:.........x.--.x.....:......x..x........................................................:x..........:..........:...x..................x.........x..:.............::..:..................:..:.......:..::....:.:...........::.................x:.x::.:....:........x:..............:..-........................x.............::.......:.:..........x...x........x..........--:..x...-:...:...x.........x..:....--.....:x:::.:.......................-----.......:......x::xxxx..::.x........:::.------......:..:......xx...x.:...:.x.... 17M2I263M1D84M2I7M1I26M2I35M5D39M6D34M 425/505 84.2% 512/94230402 0.0% 19/505 3.8% 35840027 NA +26034 chr4 + 190214555 83926053 83926052 83926641 589 AATGAGATAAGTACAAAATATTCCTACACCACTGGCTCCATGCTCTCCTCATATTCAATCATGAAGACTAATGAACCAGAGATGATTACGGTGGTAAAAATCCAAATGCAGATTTTTGCTGTCCTTACTAATGAGAGAAAAATATAGTAGACCATTGGCCTAAAGGCTCCAGATGCGATTCCTTTGTAACTTAGAGTGCATTAAAAAAGCTTCAGTCAGCAAGATAAGTTAATTTTTTTATGACCTTTATAAACTCTTTTAGCCTGTATCTCGGGAGC--TTCTTAAAGATTAAATTTTAAAAAATCCTTTTAGCTCAGGCCAACACAGCATCT--GAGTCTTTTTTGCTTCCAAGGCTACATCCAAAATCTATAAAAAAATTCTGTTCATGACAATTATTGTCAAAGTAATGATTAGCTAACATGTCATTTTTAGT--TTTTACTGTTCTTGCCTCTATGAGACTAATCCAATAA--AGCTCACATCTTCTTAATGTAAAAGTTGCATGAAGGATGCATTATTCCCGTTGACT-TTGCCTACATTTGCAAATTCTTGAAAAAGCAAATTGAATTGTCACTAGTGGCACCTCTTTCAC chr4 + 94230402 48085052 48085051 48085637 48085052 48085051 48085637 586 AATGAAACAAACATAAAATGCACCTCCCCAGGTAGCTCCATG---TCTTTATGTTCAGCCATGAAGACTAATGAACTGAGGACAAATGCAGCGCTAAAA-TCCACATGTAGATATTTGCTGTCCTCACTAATGGGAGAAAAATATAGTA--CCATTGGCCTGAAGGCTCCAGCTGTGATTCCTTTGTAACTTGGAGTGCATTAAAGAAGCTTCAGTCAGCAAGATAAGTTAA--TTTTTATGACCTTTATAAACTGTTTTTGCCTGGAACTCGGGAGCATCTCTTTAAGATTAAATGTT--TAAATCCTTTTAGTTCGGGACTGCTAAGCATCTTGAGGTCTCTTTCGTTTCAGAAGAAACCTGCAACATCTATAAAGAAATTCTGCATGTGGCGATTATTATCAAAGCAATGAGCAGCTAACGTGGCACTCTTAGGTATTTAATAGTTCTTATTTCTACAACATTAATATCATAGATAGCTGCTGTTCTC-TAATGCCAGAGTT-CTCAAGGTGTGCGTTGCCACCAGAGACTGCTCCCTGTGTTTGCATACTCATAGAGGAGAAAACTGAGTTGTCACCTATGTCATTAATTTGAC .....:.:..::.:.....::x...x.x.x:x.:........---..:.:..:....::.................::::..::.x.:.:.:.x.....-....x...:....x...........:.......:...............--..........:..........x..:................:............:..........................--.....................x....x.....x.x.........--:....x..........x..--x............:..:..x.x:.xx.......--::....:...:.:...x:.:.xx..x.x...x.........:........:x::..:.:......:......:.....x:.......:..x..:.:....x--...x.:x......:::....::.x.:....x:x...:--....xx::.::..-.....:x.:....-.x::.:.x:...:..:::x..:xx....-:.x...:::......x.:..x.::.::..x...:...:.......:x:..x..::xx...x.. 42M3D54M1D49M2D81M2D44M2I19M2D33M2I101M2I37M2I13M1D13M1D28M1I63M 432/577 74.9% 586/94230402 0.0% 21/577 3.6% 35841001 NA +24537 chr4 + 190214555 83927987 83927986 83928466 480 ATTTTCTGGGGAAATCCTTTTTTTCTAATTTGACACAGGACAATATAAAATGTTTTATTGACTGTATACATAACTGTTCAGAAAGCTCTTATAGCGACTATCTTTTGTCAATTTCTTCTGATTCTACTAAACGTTGTTTTCATTCCATAACAAGAAATGAATGAATGCAATGATTTTGGAGAGGAGGCAGTATCATTGGCTCTTTCAAAGATAAAACACTTCCAAGGTTCCTAGAACTGACTTTTACTATAGTGCCACCATGAAAGATCTGAAGATCATTATTTACTAGAAATAAAGGAACAAGGCAGAAATCGATGACTAC---ACTAGATTTATGTTTCCCTTGCTTTCTATATACATCTC-TATTTGTCCTAACTTCATGGGGAGGATATTTAATACATAATGGAAGGAGCCTGTTGCTTTTGATTTATTTTTTGTTTATTATTTTTGGCATTCCATAGAGAAATTCTGGAAATCAATACT chr4 + 94230402 48087033 48087032 48087509 48087033 48087032 48087509 477 ATTTTCTGTACAAAACCGTAATTTCTG-CATGCTGCTGAACAACCCAAAATGCATTATTGATTATACACATGATTGGATGGAG-GTTAGTGGAAGGGATGCCCTCCGTAAATTTCCTTTGATCCTGCTAAATGTTGTTACCAGTGTTCTATAGGAAACAAGCGAGTGTAATGATTTTAGAGTGG---CATTATTGTTGGCTACAGCGAAGATGAGACAGTGCCTGTGTTCCCTTAGCAGACTTT-ACTGTAGTGCCACCATGAAAGATCTGAAGATCATTATTTACTGGAAATAAAAGAACAAGGCAGAAATCGATTACTACGACACTAGATTTATGTCTCCGTTGCACTCTATATACATCTCCTATTTGTTCTAACTTCATGGAAAG-ATATTTAATACATAATGGAAAGAGGCTTTTGCTTTTGATTTATTTTTTGTTTATTATTTTTGGCATTCCTTGGAGAAATTCTGGAAATCAATACT ........x:x...x..x.xx.....:-:x..x::.x.:....:x:......:x.......:.:..:....:.:..xx::..:-.:.xx.:x.:x.:x.::.:.::..x......:.:....:..:.....:......x:..x.x:x:x.:.:....::.::..:..:.........:...x..---..x...::......x:xx.:.....:.:...x.x..x:x.....:xx.:.x......-...:......................................:........:...................x.....---.............:...x....x:..............-.......:............::..-....................:...x..x.........................................x.:....................... 27M1D55M1D100M3D57M1D77M3I38M1I24M1D95M 369/473 78.0% 477/94230402 0.0% 11/473 2.3% 35840954 NA +3007 chr4 + 190214555 83930012 83930011 83930049 38 ATATATACATATATATATGTATACACACACACACACAC chr4 + 94230402 85078510 85078509 85078547 85078510 85078509 85078547 38 ATATATACAGATATCTATATATACACACACACACACAC .........x....x...:................... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -1148498 -93081904 +3045 chr4 + 190214555 83930015 83930014 83930054 40 TATACATATATATATGTATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:.............:............x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 79520933 NA +12190 chr4 + 190214555 83932091 83932090 83932591 501 ACATTTATCAATAACAATTTATAGCAGATA----GCTTTCTGGAAAACAGTAGGAATCTAATGAAGCCTAACAATACAGCCCCCACAAAGGTTTCCAGGCCTGG---GATCAATGTCATCAGCGAAATTTATGGGAAGGCCGTGCAACTCTCTGAGATGCAGGGGCATTCTCTGCAACCTGTCTTGGATTCCATCAATTATGGTCTAATAAGGTCTTTCCTGACACAGGAGACATCTCTCTT-AGTAAGGCTTTCATTCTGCCGCTGCCTCTGAGATGTACA-TGTATATG---TAAAAACAGTTGTTTTTCTATTGCAACTGTGGCC------CTCTGAGAGAGA----------------GGTCTCCATGGGTTTTGTCTGCCTTTCTGGG----TTCTGGCAAATCCCTGTGGTTTCTCTCACTGGGTCTGTTTGCTCCAGGGAATCTG-AACAGCCAGACACCAGCTCCCAAAATCT-----CTCTGAGGTGAAACAAACACTTGTCCCTAAAAATTTCACATTCCCTGCATATTTTAAAA chr4 + 94230402 48088896 48088895 48089431 48088896 48088895 48089431 536 ACATCTATCAATAACAATTTCTAACTGATATATAGCTTTATGAAAAAGAGTCAGCATCAGCTGAAGCCTAGCAATGCA-TCTCCACCAGGGCTTCCTGGAGCAGAGCGATCAATATCCTCGGTTAAGTTTATGAGGATGCCGTGAAACCCTCTAA-ATGCAGTGGCATTCTCTCCAACCTTTCTTGTAGCCCATCAATTACAGACTAA-AAGGTCAGTCTTGCTGTAGGAAAAGTCTGTCTTCAGTAAAGATTTTCTTCTTTTCCTG-CTCTGCGAGGGGGAGGGTGTTTGTTTTGGCAAGAGTTGTTCCTTTACAGCAGACCTTGCCAGAAGATCCTGAGAAAAATCCTTCTTACTATTCCTATCTCCTTGCTTTTC-----CATCTCTGAATCCTTTCTGGTAAGTCACAGATATTTTGCAGCTTGTGATTGCTTGCTCTAAACATTCTGAAAAAGCCAGAGATGATGCTCTGGATTCTGGATGCTCTTGAGTATGAAAAACTTCTCTCCCCCAAAACTTCAACTTCTCTCAATGTAGTCAAA ....:...............x..:.x....----.....x..:....x...x:.x...x:x.........:....:..-:.:....x.:..:....x..xx::.---.......:..x..:.:x..:......:.:.x......x...:....:.-......x..........x......x.....x.x:..........::.x....-......xx..:..x:::....:.x:...x....-.....:.x...:x....x::x...-.....x..x.x:x.-x..:.x..---.::x..x.......::.:..:x...:x:x.x...------::......:.:.----------------x:.....x..xx...:-----.x.:....::----......:..:..x.x.xx:...:x.xxx:..x.x:..:......:.::x.x....-..x.......x.:x.xx::.:::.x...-----....x::..:x:.x....x::.x....:x....:....xx...:..xx..:.xx.x... 30M4I44M1D25M3I48M1D52M1D33M1I24M1D14M1I8M3I34M6I12M16I16M5D10M4I55M1I28M5I59M 334/492 67.9% 536/94230402 0.0% 53/492 10.8% 35843195 NA +3216 chr4 + 190214555 83934175 83934174 83934243 69 GTGGTGGCACGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAACCTGGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-......----....::..........::........x:xx.x...x..........::.... 6M1D6M4D52M 52/64 81.2% 64/94230402 0.0% 5/64 7.8% 7900974 NA +34559 chr4 + 190214555 83947061 83947060 83947687 627 AGCTAAGGAGTAAATTCTGTATGCAGTGAGCTCC---TATGAAGTCACTGATTAATATAATTAAAAGCCTGAGTTAATTGCAT-ACTTTCCATTAGCT-------------------------TTCATTGTATACTTACTTTCCAAGGACCCACTAGCCT---TCCCCATGGGGATCTGGTCCCACGTTTATTCAAGTGAGATGGCTGCTTTCAAAACTGAACCTTTCATCAATCCCCTATTAATTAGCTAAACGCCGCACTGGATTATGCATTTATGCCTGCCAGCAAGGCGGGAGCATCCGGAGAGCAGAGCTCACAGTCCTCTTGG-CTCATCCTCCAGCCTGGTCATTGGTATTCCAGGACAAGTCGGCTTACTGTAATTTGAAATTGGTCTGCCATCCCATTAGGAATCTGCCCGATCAATACCAAGTGAATTAGAGTTTCAGTGATCTGATTAACTCCCCATTATTTTCTACCCTGGCTGATTTAGAATGCATGATGAGACAATATTCCAGTTTCTTTGCTTTATCCCAGTTTAAGTGAAATATAGACATCTAAGGAAGCAGTGCCTGTGCATTTGATTTGGCTCAGCTGTAATAAAGTCAAACACCATGAGTATCTTCCCCATCAAAGCAGTCTTAAGTGACTGAGGGCTGCC chr4 + 94230402 48090978 48090977 48091631 48090978 48090977 48091631 654 AGTCAAGACTTAAATGCTTCATACGTTAGATTTCAGTGATGAAGACTACGATTAATATAATGAAAAGCCTGGTTTAATTGCATTGCCTTCCATTAGCTCctctctctctctctctctctctctTTTTTTATGTAATTG-TTTCTAAGATTCTGCCTCCCTAATTCCTGCTGAGGCTTTCATCCCATGTTTATTCAAGTGAGGGTTCTGCTTTCAGAACTGCACCTTTCATCAATCTCCTATTAATTAGCTAAATGCCGCATTGTATTATACATTCATGCGTTCGGTCGAGCGTGTGCCATAAAGAGGGGAGAGCCCCTGGTCTGCCTGGGCTCCTCGCAGGAGCTGGTCATTGGTATTCCAGGATAAGTCCGCTTACTGTAATTTGAAATTGGTCTGCCGTCCCATTAGGAATCTGCCCAATCGATACCAAGTGAATTAGAGTTTCAGTGATCTGATTAACTCCCCATTATTTTCTACCCTGTCTGATTTAGAATGCATGATGAGACAATATTCCAGTTTCTTTGCTTTATCCCAGTTTAAATGAAATATAGACATCTGAGGAAGCAGTGGCTGTGCATTTGATTTGGCTGTGCTGTAATAAAGTCAAACATTGTGAGCATCTGCCTCGCTGTGACAGCTGGGAGTG-----GGACTGCC ..::...:xx.....x..x:..:.:x.::::.:.---x......x.xx:............x.........:x..........-:.:...........-------------------------..:x..:.:..x..:-....:...:x:.::.:xx...---...:xx..:..x.:.x:.....:...............:xxx.........:.....x..............:.................:......:..x.....:....:....x.x.x:x.:..xxx.x:x...xx:...:.x.....:.x::...:x.:...-...x..x:xx::x.....................:.....x............................:...................:...:..........................................................x..........................................................:................:...........x...................xx...................:::....:....x..:.::::x::...::xx:....-----..:..... 34M3I46M1I14M25I15M1D21M3I166M1I317M5D8M 497/621 80.0% 654/94230402 0.0% 39/621 6.3% 35856083 NA +6388 chr4 + 190214555 83950238 83950237 83950390 153 TATTACACATTTTGTGGACTATGAGACAAAA--TGGATGGTTATGT---TAA-ATATACAGCTATTATATTAATATCAATTTATGTCTATTACAAATTACTTGTTATAGATTTGCTGACTTGTACATAGACAACTCATAAAAACATACATAAAATTTTA chr4 + 94230402 48092460 48092459 48092614 48092460 48092459 48092614 155 TGCTGCACATTTTGTGTACTAATAGGCAAAAAATGGGTCATAATCTGCTTAACATGTGCAATGAGtatataaatattaatttatatCTTCTGCAAATTAAT----ATAGATTTGCTGACTCGTACATGTGTAATACATAAATACATACATAAAAGTTTA .::.:...........x....xx..:.....--...:.x:.x..x.---...-..:.:..::x.x.....x.....:.......:...x:.:.......x.----...............:......:x::..:x......x............x.... 31M2I13M3I3M1I48M4D54M 115/149 77.2% 155/94230402 0.0% 10/149 6.7% 35857778 NA +11374 chr4 + 190214555 83965444 83965443 83965725 282 TTAAATATTTTATAGTTGTTTGTGAGAAACCATTATATACTTCTATTAATTAAAACTCACTCTGACATGCAGGCTC--TAATATTTAGGAATTACTGAGATTTTATCTCATTTGTGCATTTACAACCCTATTTGTGCTGCCAATTAACCAGAATGCTCCTCCAAGGTAAGTTCTATCATCCCACAATGCACCTGGGCTGTCCTTTACTTGACTGAA-ATATATCATGAAATGACAGCTGCTTGAAAGGGACCTTTAATGAAGTATGCTCTACTTTTGATGTCTTC chr4 + 94230402 48093537 48093536 48093819 48093537 48093536 48093819 283 TTTAATGTTTTATTATTATTTCTGAGAAACCCATATAGAACTCTATTAATTAAAACTCAGCCCGACACTTTGGCTCCATAAGATTTAGGAATTAGTGAGATTTTATCTCATTAGCGCATTTATTGCAGTGTTCGTCCTTTTAATTAAGCATTAAGTCCCTCCAAGGTGGGTTTTATCATCCCATAATGCACCTGGGCT-TTGACTACTTGTCTAAATCTGCATTAGAGGATGACAACCACTTT-GAGAAACCCTAATTGTGTTATCACCCAAGTCTGATGCCATC ..x...:......x:..:...x.........xx....x.x:..................x:.:....:x:x.....--...x............x.................x.:.......:x:.xx.:..:..x..x::......x..xx.x.::..........::...:..........:..............-.:xx:......x..:..-x.::..:.x:::......:.::...x-:..::...:.x.x..x:x...xx:.:.xx.:.....:.x.. 76M2I120M1D17M1I26M1D41M 201/280 71.8% 283/94230402 0.0% 5/280 1.8% 35871907 NA +22131 chr4 + 190214555 83970509 83970508 83971107 599 TTTTGGCTAAAGAGATTATCATCCCTGAATATAATCTCAAAGAAAGTTCCTGGGCCCTGCTCCAATAAGAAAAAGTCTTGTTTCTCTTTACAAAATCAAAGGAAAGGGCTTTTTATTATATGAGAAGTATAACATTGCATTCCAGTAGAGGAAACAGGCAATCACCTTTTGATCCCTAATGTGGATACCCAAGTTTGTAAATTTAAT-AAAAAGATAAAAAATGTGGTGGTGTTTTTATCTCAAGCAATAAACTCTGATTAAATCTTGCCAGTTTGATGCTAACAGTCTTCCTGGGTAGCATGAAGGTGAGTGAAAGCTTTGGACAAGATAATAGCAACAGACAAATGTGAAAGAATATGAAGTTTTAAAGAGCCTTTCAGAACACTAAAGAGTTTAGGAAATTAAAGTAATC-AGTATGGCTTT--TCATGCTCCCGTGTAGGCTTAACTGTCTAGGT-------TCATTCACTTCTCTGTCATGGAGTAAATC----TATCTCCACCATTGTAATGACTATTTCTTAGTCTGTAATGATTATCTTTCATGTTCCTTTTTATTATTATTTAAAAAAATAAAGATGGGCCAGAAAGTAATATGCACATTATCTG chr4 + 94230402 48095647 48095646 48096241 48095647 48095646 48096241 595 TCCTGTTTAAAGAGATTATCAACTCTGAATATAATCTGATGAAAAGTTATCTCTCCCTGCCTTGGTAATGAAAAGTCACCTATTTTTCCGACAAATTAAAAGAAAAGGTTTTTTATTGTATGAGAAATATAGCCTAGCACTCTGAGGCAGGGTGCAGG-AATCACCTTTTGATCCCAAATATGGATGTTCAAGTTGGTAAATTTAATAAAAAAGATAAAAAATGTGGCAGTGTTTATACCAAAAGCAATAAACTCTGATTAGATCTCACCGGTTTGGTATTGA-AGTCTCTTTGGGTTGCACAGAGGTGAG----AGCTTTGGGCGAGATAATAGCTTCAGACAAATGCAGGAGAGTATGAAG-TTTAAATAACCTTTCAGATCTCT-CATTGTTTAGGAAATTAAAATAATCAAGTATGCTTTCTGTCACTGTCCCCTGTGTGCCTAACTGCCCATGCCTCTCCATCATTCATTATCCCATAATGGGGGATATCTCTGTACTTCTTCCATCACGCAACCTGGCTGCCTGAATGCTGTGAATATCTCCATCAGATCATTTTATTAATGTCTAAAACTGCAAA---GGGACAGAA--------GCAAATCACCTG .::..x:..............x.:.............x.x::......x::xxx......:::::...x:.......x:x.x.:.:.:::xx....:...:....:..:........:........:....:.x.x...:..:::x:x...:x:....-.................x...:.....:::......x...........-...................::......x..:.xx...................:....::..:.....:.::.:.-.....:::.....x...:::.......----........:.:..........xx..........::::...:.......-......x.:.........x.x..-x.xx...............:.....-......x:..:--...:xx....x...:x..:......:.:.x.:-------.......:.x::.::.x....:.x.x...----..::..:x....::::xx:x..:x:.x::x.xx..:x:...x.....::xx::xx:.x........x.:.:.....xx::...---...x.....--------...x..:.:... 158M1D48M1I75M1D27M4D48M1D23M1D25M1I11M2I32M7I29M4I83M3D9M8D12M 413/580 71.2% 595/94230402 0.0% 34/580 5.9% 35874862 NA +7439 chr4 + 190214555 83972017 83972016 83972164 148 GAAGATAACCATAATATAAAATGAGTCTGAAAGTCATTTATAAAGAACAGGATATTAAA------AGCTATAGGAAAAAA-AGGCCATTTATCTATTTGTGTACTATTTTGAAGACTTGAGCCAAATGTTTCATCAGTGATTTGGGCGCCTTCCA chr4 + 94230402 48097256 48097255 48097409 48097256 48097255 48097409 154 GAAGACAAC-ATAATATAAAGTAAGTCTGAAAGTCATTCATAAAGGACAGGATATTAAAGCAATGAGCCAGGGGAGGGGGCAAGCCATTAATCCATTCATCCGCTATTTTGAAGACATGTGCCAAATGGTTCTCCCACAATTTGGATCCCTTCCA .....:...-..........:.:...............:......:.............------...:.x:...:::::-.:......x...:...::.x::.............x..x........x...x:.x:::......::x....... 9M1D49M6I15M1I74M 114/147 77.6% 154/94230402 0.0% 8/147 5.4% 35874761 NA +29407 chr4 + 190214555 83977329 83977328 83978247 919 TAAGAATGTTAAACTTCAATAAAGAGGAAAACAGTTTATAAGAACTGTTCCTTTGTGATGTAGAGAGATGCTTAATTAGCTAGAATGTCATTTAAAATTGCAGTGTAAATCTTTAAAAAATTAATCCCAAGTCCCCA-TGAATTATGTCTCCTCTGA-TTGTGCGCTCCAAAAGATTTTAAATCAGCAAGGCACATCTTGATCTAAGAACCATGT-TAATGTTTGCACACTCTCCACTTTCTCATTTGCTTCAAGAGAGGAAGGT---TTCTCCTTAATTCCATTTAC------AACAGCTGGATTTTGGAAGACAAACATTAACAATCTACAATTAAAAATCATTTCAGCTAAAGGGAACCTGAACAGATGAGGAGCATCATTGACAGTGGATTTTCCCCACTTCCTACGCTCTCCCCAAAACACTGCTTGTTTCCCTTCCCTTTTAT----------------TTTATTTTAATCACTCTTCTGAGACATTGTTGGGACTGACTCTTCATCAAGGTGTCCAGCTGAAAAATGGTTATCAGATCCTGCTGAGGCAGGGACAGAGGAACAGCAGCTCACATCGGCTGCAGATGTGCAGAGTGGTAA-CTTTGGGAGGCAATGATAATTAAAGAGCATATGGTCCATAATAAATCTGTACAGTAGTGTTAGCCTGTATTAATCGAGGGATTAAGAGTAATAGCACATCCTTACAAATAGCATGTTAAATCTCAAGTTACAATTCCTAGGCTTAACATAGGTCTGTGTAAATTTGGT-----GTTTTTCTTATTCGATATAGCATATGAAGTGTGAGA-GATTTATGATATAATTTGTGTACATGCACCCTGATCAAAATGGCTGAGAAGGGCCTGATAACACACAAACATCTGGAGATACAGATGTCAT-----TCCCGTGAAGCTGAAGACTGCCTGGGGTGGGGTGGGGGCAGTAGAA chr4 + 94230402 48099024 48099023 48099928 48099024 48099023 48099928 905 TAAAGTTGTTAAGTTC--GCAAGGGGAAAAATGGCTGAGAGGAACTGTTCGGTGGTAATGTAGGAAGACACTTAATTAACTTGGGCTTCATTTAAAACCGTAGCGTAAATCTTTTCAAAATGAATCA-AAGTCTTTGCTGAATTATGTCTCGGCCAAGTTTTACAGTCAAAAGGATCTTAAATCAGTAAAAGCTGTCA----CTGAGAGCGCTGTGTGGTGTTTCCACACTCACTACTAGCTCATCCGCTCTTGGACTTGGAAGTCTTTTTTCCCCAGGTCCGTTTGCTCCAGCAGCAGCTGGCTTTTGGAGGCAGCACATTAGCAGCTCACAATTAAACAGCATTCCAGCTAATTTGAGCT---------------CATCAGTGACAGTGAGTTTCCTCC-----CTACCCTCT------------GTTTGTT--------CAGTTATAAAAAAGGAAACGTTATGTATTTTAATCGCTCTTCGGAGATGTTGCGGGATTTTTCTCTCCATTGTGGTGTCCAGCTGAGAAATCGTTCTGGGATCTTGCTGAGGGAAAGG--AGAGAGTGTCAGCCCACAC--GCTGCAGATGTGCAAGGGGGCAAACGGGGGGAAGCAATGGCAATTAAAGAGCATATGGTCAACAATAAATCTGTACAGTAGTGCCAGTCCGTGTTAATCACAAGATAAAGAATAATAGCATATCTGTACAAGTAGCATGCTAAATTTCCTATTATGTTTACTAGCCTT--CATATATCTGTATCTGTTTGTTTATCAGGGTGTCTTACGTGATATAGTATATGAAGTGAAGGAGGATTTATAGTACATCATGTGTAAATGGA-CCTGATAAAAACTGCAGGAAAGGGCATGATGAAACATTAACATCTGGAAAGAAGTATGTCACTGGAATAACGCACAGCAAATAGCTGCGTGAATGTGTGAAAGGACAGCAGAA ...::x......::.:--::..:.:.:....::.:.x.x.:.........xx.x..:......::...::........:..x.:::x..........::.:..:..........xx.....x....x-.....::::-.............xx.::.-..x.:.:x..x...:...:.........:..::xx::..x----..:...:.xx...-.::.....x.......x.:...xx.....::...::x:..xxx.:.:..---..:...::.:x...:...:.------.:.......x.......:.xx:x......:..::::.........x.x....:.......xxx..:.:---------------.....x........::...:.:..-----....x....------------.:.....--------.xx....----------------.x..........:......x....::...:x..:x:.xx....:...::x.............:....x...x.x:....:........x.::.:--:::..:::x....:....:--..............::.x..:..-.xxx....:......::...................x.:....................::..:.:..:......:x::...x....:........:...:x.....:.......:.....:..xx:...::x..x....x...--....x:.....:.xx:....x.-----.xx.x.....:x:.......:..........x::..-.......::..:.x:x......x...x.-......x....:x..x.::......x....:.x...:x..........:.x.x:x......:-----.xx..::x...x:.x::....x..::xxx.x.x::..:...:.... 16M2D109M1D9M1I19M1I40M4D13M1I49M3I20M6I68M15D24M5D9M12D7M8D7M16I95M2D19M2D23M1I144M2D22M5I36M1I28M1D62M5I46M 609/865 70.4% 905/94230402 0.0% 94/865 10.9% 35878305 NA +9274 chr4 + 190214555 83979898 83979897 83980101 204 GCTGATCAGCAACTCATTTTTCACCCGATGTCATTCTGTTCTCTTCTGGCCTCCTCCTAACCATACTGTAGATGAATAGCCATGCTCCTAGATTTACTGTTCTGCCACTGACTGAGGAAGCAGCTGCTGATGCTGTGATGATGCATGCAGTCTAGGGATGCCAGGCTTTTACTTCTATCAGGGACATTTTTTCCTTATTGGTTT chr4 + 94230402 48100725 48100724 48100918 48100725 48100724 48100918 194 GCTGGTCAGCATCTCATTTTTCACA----GTC-TTCTGTTCT-TTCCGGCTTCCTCCCAGGCACACCATGTGTGCGCAGCAGCACTCCTGGATTTACTGTCCTGCATCTGAATGAGGAAGTGGCTGCTGATGCTGTGATGATGCAGGCACTCTAAGGTTGCTAGGTTGTCATTCCTGTCTATGAGAATTTTCT----TTGGTTT ....:......x............x----...-.........-...:...:......:.:x..:..::.:x:..x::...x:::.....:..........:....xx....x........::.......................x...x....:..x...:...:.x.:.:.:..:..x:x..x.x....::----....... 25M4D3M1D9M1D150M4D7M 148/194 76.3% 194/94230402 0.0% 10/194 5.2% 35879173 NA +15834 chr4 + 190214555 83996636 83996635 83996919 284 GCAGAGGC-AGAAAGCTCATTACAAATTCGGAACCACAGTGAAATGTTAGTACATCATTAATATGCGTAGGTGTAGATATCTGTCTGTTGTT--TTATAATGCTATTTCATTTATATAGTGCCAGTACTTGACGGATGTAAGAGACTTCATTCCC-AGCTAGAGAGATTCCTAAATAAAACTAGCAAGTTATTGCAGAAGTAATCAGACAGAGTGAAGGAGTTCAGGTTCTTGTGTCTCTCTCTATATAAGACCAGGTTTTGAGTTTTGTTTCAAATGTCTCTCTATG chr4 + 94230402 48103980 48103979 48104264 48103980 48103979 48104264 285 GCATAGGCGAGCATGCTGGTTATGAATTCCAGGCCACTTCAGAATGTTAACACATCATTAATATGCAAAGGTGCAGATATCTGTCTGTTGTTCTTTATAATGCTATTCCATTTATATAGTGCTAGCACTTGAAGGATATAAGAGACTCCATTCCCCAGCCAGAGAGGTTCCAAAATAAAAC---CAAGTTTCTGCAGAAGTAATCAGACAGCCTGTGGGAGTTCAGGTTCAGATGTCTTTCTCTATGTTAGTGCAGGTCTCGAGTCCCATCTGAGAGGTCTCTGTATG ...x....-..x.x...x:...::.....x:::....xx:::.......::...............:x.....:..................--.............:..............:..:......x....:.........:.......-...:......:....x.........---......x:...................xx..x:.............xx:.....:.......:.x..xx.....:.:....::::.:.x.:.x......x.... 8M1I83M2I61M1I25M3D104M 226/281 80.4% 285/94230402 0.0% 7/281 2.5% 35892656 NA +3121 chr4 + 190214555 83998210 83998209 83998302 93 AAAACAAACAAACAAAAAACCCATGAAAAACACAAAAACAAAACAAAACACCAAAAAAACCAACAGTAGACATACATTGTCCCATGGTGAAAA chr4 + 94230402 24083629 24083628 24083714 24083629 24083628 24083714 86 AAGCCAACCAAACAAAAAGCCCATGGAAACAACAACAACAACAAAAAAATACAGAATACCTAGCAGTGAGAAAACA-------ATGATGAGAA ..:x...x..........:......:...xx....x.....x.x....xxx..:..x.x.:.:....:::x.x...-------...:...:.. 76M7D10M 61/86 70.9% 86/94230402 0.0% 7/86 8.1% 59914581 NA +40788 chr4 + 190214555 84001693 84001692 84002542 850 GCTACTAAATAATATAGTTTGTAAAATGT-------CATGGTACAGAATTTGGATGATTC-CAGTTCTAAAAAGTTGATGACAATATGCTCATCCTTTTAATGGAAAAATTACTAGGAGGTTCCTGGCTACATAATCCAACATACTGCAGAAGACTTGCTGACTTACGCTTTGTGACAGGCCAGTGAGAAAAATACACAAACTCATACACCAATGTTGCAAATCAATTCTGCGGCAAAGTGGAAATAACTCTTGTACCAATAAGCAGTAAGACCTAGAGGGGAGAAATCC---TTTTCTGAATTTCCAACTTGCAGACAGAAAGAGAAGCCATCAATCATGCTAGAGAGCTTCCATTTCAGGGCCATTGTTCTTAAAGACAAACCAAATGAAATCAGACAAGACCAGAATATGCAAAG--GCCTTTGGATTTTTCCAGTCTTGGTGCAGGAAGGAAGCAGAGAAAAACAAGA----------------------CTTTCTCTCCTTT----TCTTCTAGATGTGAAATGTGAAGTCCAGCAAAAGCATGCACATAGTCTCAGTTTATTGTC-AAATGACCAATTAATCACTCCACAAATGGCTATTAATCATACACATTAATGAGATATTCTCTTTGCTCTGGCAAATACAGATTCTGTGGCAATCCTTTCTCCTTGGTACCGAAAGCAAGCTAAAAGCATGTAGAACTCAATTAATCTTGAAGCAGCATGGGGTGTTTGAAATTGCTCACAGTTTGAAAAGAAGCAAACAGCAAAGACATTTAAACTTGTCCATATTTCACTGTGTAAATTCAGAAGCACTTAATCATTCCCT-ACACATTCTTTTGTTCCCTTTCTTCCTCTGTCATGTTATAACTGTGTTTTAAGTCT chr4 + 94230402 48105881 48105880 48106755 48105881 48105880 48106755 875 GCTGTTGGGTAATATGCTTTGCAAAATGCAGGCATCCACAGCA-AGGCTGCAGATGCTCCACTGCTTCTGGAAGTTAATGACAATTATCCCACTCTTCGGTGGCAAATGGTGTCGTGAGGCTCTCATTTCCACAATCCATCATGCCACCGAAGACTTCCTGAGTGATACTTCATGATGGGCTGGTGAGAAAAATATACAAACTCATATGCCAGCGTTGCAAATCAATTCTGCAGCAAAGTGGAAATAACTCTTGTACCAATAAGCAGTGAGACCTA---TGAAAAAATCCCCATTTTCTGAATTTTCAACTTGCAGATAGAAGGAGAAGCCATCAATCATGTTAGAGGGCTTCTATTCTGGCGATGTTTTTCTTAAAGACACA-CAGATGAATTCGGACAAGACCAGAATATGCAAAGCCTCTTTTTTTTTTTCTCCCCCTCTGTGCTGGAGTGCTGGATATGAGAACAGGGAACCTTTTTTTTTTCTCTATTTTTTTTTCTCTTTTCTACTATTTTAAAAGC-AAACCTGTAGTCTAGCAAAGGCATGTATATTGGTTAAGTTGACTGTCAAAATGACTAATTAATTGCTTCACAAACGGCTATTAATCAT--ACTTTAATGAGATATTCTCTTTGCTTTGGCAAATAGAGATTCTGTGGCCATTCTCTCTCCTTGGTACCCCGAGCAGGCTGAAAGCATGCAGAACTCGATTAATCTTACAGCACCACGGCGTGTTCG-AACTGCTCACTAGCTGAAGAGAAGCAAATAGCTGGGACATTTAAAC-TGTCCATATTTCACTGTGTAAATTCAGAAGCACTTAATCATTCTTTCAGGCATTCTTTTGTTCCTCTTC--CTTCTGCCTTGTTATA----TGTTTCAAGCCT ...::.:::......:x....:......:-------..::.:.-..:x.x::....x.:.-.x.:.::x::.....:........xxx.:..::...:x:xx.x...x:x.::::x....:..:::x:.x..:......x...:.::.x........x....x.x.::...::...::...::............:...........::...::..................:...................................:.......---x.:.:......---............:...........:....:..................:.....:.....:...:::.x.x::..x............x.-..:.....x..:......................--x.:...xxx....::.xx:..:x....x...:x.xx.x.x.x:.:....:.:----------------------:...:....:...----.x..:..:.x.:-...:x..x....:......:.....:.:..x.x:.x....x.:....-.......:.......::..:......:.............--..x......................:.........x............x..:..:.............xx:....:...:........:.......:.........:x....x..:..x.....:.-..:.......x:x:....:.........:...x::...........-...........................................::.-.x:..............::...--.:....:.x.......----.....:...:.. 29M7I7M1D16M1I215M3D11M3I90M1D34M2I52M22I13M4I12M1D47M1I40M2D126M1D46M1D46M1I22M2D16M4D12M 645/834 77.3% 875/94230402 0.0% 57/834 6.8% 35895812 NA +3198 chr4 + 190214555 84002652 84002651 84002703 52 TCTGTGTGTGTATGTGTATACACACACACACACATATATATATATATTATAT chr4 + 94230402 60831550 60831549 60831600 60831550 60831549 60831600 51 TCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT-TTATAT .......:.:.................:.....x.x..x...:..-...... 45M1D6M 44/51 86.3% 51/94230402 0.0% 1/51 2.0% 23171102 NA +14521 chr4 + 190214555 84014892 84014891 84015388 497 TTGCCTCTTTTCCCTTTGCCAAATAGTTGCTTATTAGTTTCCTAGGTTTTCACTCTAGAAGCTTG----TATTCATATATGATGAAGTTGGTAAAATGCATTTTCTTTTCTCAGTAGTAAAAT----TATTTTTCTTTGGCTACATGTCAATGAAAATAACAAACTCTTCAGCTCCAAAGGGTCTAAAATGCCAGCTCACAAGTAGTT--TTTTATTGGGGTACTTGTTTTTACTAACTTCTCCATTAATAGTACAAATCTGTTGCCTGATTAAAGTGTCCTATGAAATTGCCCTATTCCACTCAAATCTGGAAGTCTTC--CCTACAGCAAGTGTTTTGAGATATTGTTTCTGGTTCTGTGAAATAAAATATGGTCCAGATTTGACAAGTAAAGATTAAGTTGGAGCAGGTCCTTGGCCTCTCCTCCCTCTGTGGCTAAAGAGAAGCCTACTCCATCGCAGGTTGTGCAGGAGT----------------------------GACCTTC-CCCACTCGCTGGGCTCTCTTTGGCTTA chr4 + 94230402 48108191 48108190 48108705 48108191 48108190 48108705 515 TTTCCTCTTGTCCTTT--CCAAATGGCTACCTTTGAGTT------ATCCCCGCACCAGGATGCTGGAGGTGTTCATTTTCTGAGAA-------AAATGTATTTG-TTCTCTAAAGGGTACCATAGTGTGTTTTCTTTTGGCAACGGGCTGATGAAAACAATAAATTATTCAACCTAAGAATATCTAAAATGCTGACTCACTGCTGGTTCCTATTTTTTAGGT-CTTGTTTTCATTAACTTCTACACGAATAGTCCAAATGTGTGGTTGGATTGAAATGTCCTGTGAAATTGCCCCGTTCCCTTCAAATGCAGAAGCCCTCAGCCTCTATTAAGTGCTCGGAGATATTGCTCATGATTGTGTGAAATAAAATACGGTCTAGATTTGACAAGAAAAGATTAATCTGAAACAATTTGCT-GCCACCCCTCCCTCT-----CAAAGTAAAAGCTCTGCTGCTACAGCTGCAGCAAGAGTAGGGGCTGCTATTGCAGAAAGAGCCAAAAACCTTCTCTCAACTGCTGAGCTTTCTCCATCTTA ..x......x...:..--......:.:.:.:.x.x....------:.:::.:.x.:..:.xx:..----.:.....x.x:x:x...-------.....:....x-..:...x.:x:...xx..----.:....::......x..:x.:::.......:..:...:.x....:.::x.:.:x:..........:::.....x:x.:...--.x..x..x:...-........:.:........x..:x......x.....x...x.::x....:..:......:...........::....x:......x::....:.:..--...x:.x:.....:.:x.........:.:x..:..x..............:....:............x.........x:..:.:..:x.:x:.-...x.:.........-----:....x:..:x..x:x.:::::...x.xxx...:....----------------------------:......-.:..x::....:...:...:::x.... 16M2D21M6D20M4I17M7D11M1D18M4I81M2I12M1D97M2I94M1D15M5D38M28I7M1I27M 328/474 69.2% 515/94230402 0.0% 64/474 13.5% 35906701 NA +5942 chr4 + 190214555 84016050 84016049 84016155 106 TTCTTCATGTCTTGTTTTTATTAACTTCTTCATTAATAGTACAAATCTGTTGCCTGATTGAAATGACTTATGAAATTGCCCTATTCCATTCAAATCTGGAAATCTT chr4 + 94230402 48108387 48108386 48108492 48108387 48108386 48108492 106 TTTTTTAGGTCTTGTTTTCATTAACTTCTACACGAATAGTCCAAATGTGTGGTTGGATTGAAATGTCCTGTGAAATTGCCCCGTTCCCTTCAAATGCAGAAGCCCT ..:..:.x..........:..........x..:x......x.....x...x.::x..........x.:.:...........::....x.......x::...::.:. 106M 81/106 76.4% 106/94230402 0.0% 0/106 0.0% 35907663 NA +16405 chr4 + 190214555 84024398 84024397 84024682 285 TCTAAACATAGTTGTATTTCCATCCATTTGGTGGGTCTTGGGAATTTTCTTTTCATATCTGTGAAAACAGCAAGCTGACAAGCTTCTCCTTGGCATGACACAGCATGTGTGAATCTATGTCATGTCCAAGTGACTTTGTTCATAGTTAATTTGTTAAATTCCTTTGGAGAACAGACATGGCATTCCCTACTGAGCAATCAGCACAGCTGCGAAGCCAGGCAGTGGCCAAACAGAACCCAGTGGGAAATGTGTATTCAAAGTCCAGAGACAGCAGTCATGGCTGAG chr4 + 94230402 48110489 48110488 48110768 48110489 48110488 48110768 280 TCTAAACATGAAAACATCTTCATATATTGAGTGGGTCCTGGGAATTTTCCTTTCAGATTTGTGAAAACAGCAAGCTGACAAGCTTCTTCTTGGCATGACACAGCATGTGTTAATCTATGTCATTTCCAGGCTACTTTGTTCCTAGTTAATTTGTTAAATTCTTTGTGAGAACAGACATG---CTCCCCACTGAGCAATCAGCACAGCTGCAGGGAGAGCCAGTGGCCAAACAGAGCCCACTGCCTGCTGAGTATTGAGAA-CTGGGAAGTGAAGTCA-GGCTGGG .........::xx::..:.:...x:...x:.......:...........:.....x..:............................:......................x............x....:.:x.........x...................:..xx.............---:....:......................:::.xx..x...............:....x..xxx:x..x.....x.:.:-.::.::.xx.x.....-.....:. 179M3D78M1D16M1D7M 227/280 81.1% 280/94230402 0.0% 5/280 1.8% 35913909 NA +7014 chr4 + 190214555 84030628 84030627 84030997 370 TTAAAAAAAGGTCAGACACCTAACCTGGCGGGTCTCAGCCATCTCT---CCTCTCTTTGGC---TGTTCTCCCTGGGTAAATCTCTCCATGAACATAGGCCCTGCTGCCCAACTTTTCACGTTGAATGACTTTATGCACCACTTGGATTCCACAT--------GGCTGGGCACCTTGGCTGGTTCTTGAGTTGTCTTCATCT---TGTCTCCACACTAGCAGCCACCAGCAATTTTCTCAAGTTATCTGGAA--GCATAATCCTTTTTATTTTTTGAGAGAAT--GAGTGAATGAATGGGGATGGAAAGTCGTCCCAAAGGGAACTGAGTGGTATTCCTGG-CTTTATGCCTCAGCTTTTC---CCTCTGTCAATCTGCTTCCCAGCTTTTATTT chr4 + 94230402 48113276 48113275 48113654 48113276 48113275 48113654 379 TTATAAAAAGGTCAAACACATAACTTTGCAGCTTTCAGCCGTCTCTATTCTTTTCTTTTGCAATTCTTCTCTCTGATTAAAT-TCCGGATAAGTCTAGGCACTGTTGCCCAGCCCTTCACATTTAATGATTTTATGCATCACTTGCTCTTGGCACTGTTCGCAGGCCTGCCATCTCCACTGCAGCCTGTGATCTTCTCCTCTAAATGT-------TTGACATCCACCAGCGTTTCTCTT---TCACTCGGAGCTGCCTTTTTTTCCTTATTTCTAGTGAGGCCTGGAGAGGGAAAATGATGGCGGACAACCCTC---AGACGGATTACCTAATACCCAAGGATTTTCCTTCTCAGCTCTCTTAATTGTTGTTTATCTTCTTCCC--TTTCTATTT ...x..........:....x....:.x..:.x.:......:.....---.:.:.....x..---.x.....:...:x.....-..:xx..:.::x.....x...:......:.::.....:..x.....:........:......xx:.:x:..:--------...:x.x..:..:x:...xxx.:..x.x.x.::..x...---...-------:.::..x........:x..:...:---.:.:::...:--..x.xx.::.::......:.x.x...:x:--...x.::x:....:x.::...x.::.x..---.::x.:.:.:xx.::..::.xx..-:...x:x:.......:.::---::x:...:x....x......--:..:..... 46M3I12M3I18M1D72M8I39M3I3M7D24M3D10M2I29M2I29M3D24M1I19M3I20M2D9M 228/354 64.4% 379/94230402 0.0% 41/354 11.6% 35917352 NA +3573 chr4 + 190214555 84040151 84040150 84040224 74 TTTCATCTGCTCATTCTC-----TCCTTCCTTTTGGTCTCCTCTCTCCCTCCCCTTTTCTTTCTCCCTCCTCTTCCTCT chr4 + 94230402 68929820 68929819 68929898 68929820 68929819 68929898 79 TTTCATCCCTTCTTCCACGGGGTTATTTCCCATTTACCCCCTCCCTCCCCCCCCTTTTTTTTCTTCTTCCTCTTCCTCT .......:x:..x.:.x.-----.x:....:x..x::.:....:.....:........:.....:.:............ 18M5I56M 55/74 74.3% 79/94230402 0.0% 5/74 6.8% 15110331 NA +17624 chr4 + 190214555 84051566 84051565 84051869 304 AGAATAATTACCAGCCAAAAAAAAAATAATATTTTCACTGACAGTTGAGGGCAGTTAGTTTCCCAGGGAGAAG-CACTGGTGGCAAAGGGCTTTACACAGGGAGGCCTTTGTCATTTTATGGATGCTCATCTGTCAACTGTCAGCGTGTTTCAAAGGGACTCTGCCCATAATGTTTT-CCTCTGCACCTTTCCCATCATGGTGGCCCAAATTTCCCTGACTAACCATTCGTCTTCCTATTTGCCTAGTCTGGTCTCTTACAATGAGTGGAGATGTAGTGGTGATTCTGCAGCTGCAAAGAGTGAGG chr4 + 94230402 48120725 48120724 48121021 48120725 48120724 48121021 297 AAAATAATTACCAG-------AAAAATAATATTTTCAGTGACAGTACAGGGTAATTAGTTTCCCAGGGAGAAGACGTTGGTAGCAAGGGTCTTTACACAGGGAG-CCTTTGTCATTTTATGGATGCTCATCCATCAGCTGTCAAGTTGTTTCAAAGGGATGCTGGTCGTAATGTTTTCCCCCTGCGTGTTTCCCATCATGGTGGCCCAAATTTGCCTGAATAACCATTCGTCTTCCTGTTTGTCTAGTCTGGGCATTGACAATGGGTTGGGA-GTAGCAGTAGTGCTGTTGGTGCACAGTCTGGGG .:............-------................x.......xx....:.:...................-.::....:....:..x..............-..........................::...:......:xx.............:x...x:.:.........-..:....::x.........................x.....x.................:....:.........x.x:.x......:..x.:..-....::..::.x...:x.x....x..xx..:.. 14M7D52M1I30M1D72M1I94M1D33M 246/295 83.4% 297/94230402 0.0% 11/295 3.7% 35930841 NA +17438 chr4 + 190214555 84058118 84058117 84058451 334 TTCTGTGCTTTTCCCTGGAGGTACTAAAACAATTGTGAAAA--TAAGGCCAAAGATTTC------TTTTCAGTTTCCTCTATAGTCACAGAGAATCGCTTAGGCTCA-CTAAAACCGTTCCCTAGATGGAGTCAAGTTGCTTTTTTAGTAATTCCATTCATAAATACACACTGGCTGTCTAGTAGAGCACTTGAAATCTTGATAATCAAAAGCTTATTGTGTGTTTGAGAAGCCTG-AAAGGAAATTGAAGCTAATACCAAGGGAGAATAGAATAAAGTTAGATGTTTTCCTTCCAAACCAGCAGGAGGTCATTTAAAGTATAATGTAATGCACAACGTTTAAC chr4 + 94230402 48126203 48126202 48126545 48126203 48126202 48126545 343 TCCTATGGCTTCTACTGGATATCACTAAATAAATGTAAAAAATGAAGGCCAGAAACCTCCAGGTCTTTTGAATTTCCACTTGTGTCACTCAGAGACACTTAAGAGTAGCTGCAAATGCTCCCTTGATGGAGTCGGATTGCTTCTTTATTAATTCCATTCATAAATACACAATGGGTGTCCAGTGGAGCACTTAAGACCCCGATAATCAAAAGCTTATTGTGTGTTTGAGAAACTTGAAAAGGAAACTCAAGTAAATACCAAGGGAGAATAGAGTAAAGTTAGAGTTTTTCTTTCTAAACCAGCAGGAGGTCATCTGAAGTATAACGTTATGCACAA-GTTTGAC .:..:..x:..::x.....x:.xx:x...:..x...:....--x.......:.:.::..------....x.:.....x..xxx.....xx...:x.:....:.xx:.-..:x..x:.:.....x.........:::......:....x......................x...x....:...:........:.:.:.::...............................:.:..-........:.x...:x...................:..........xx.....:...:..................:.:........:..x........-....:.. 41M2I16M6I42M1I128M1I99M1D7M 261/333 78.4% 343/94230402 0.0% 11/333 3.3% 35931915 NA +3514 chr4 + 190214555 84058726 84058725 84058827 102 GAAGTAGAAACAGAATC---ACTACAGTTAAAAAAAAAAAGAAAGAAAGAGAAAAGAAAGAAAGA-------AAGAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAA chr4 + 94230402 53385276 53385275 53385387 53385276 53385275 53385387 112 GAACTGGAGAAATAATCTCAACTGGAGTTGAGAAAGAAAAGAAAGAAAAAGATAAGAAAAACTGGCTGTGCTAGAGAAAGGTGAGGGGGGAAAAAAAACAACAAAAGAAAAA ...x.:..:.x.x....---...:x....:.:...:............:...x......:.xx.:-------.:::...:.x:..:::.:..:...:.x..x:.....:... 17M3I45M7I40M 70/102 68.6% 112/94230402 0.0% 10/102 9.8% 30673450 NA +3069 chr4 + 190214555 84058747 84058746 84058812 66 CAGTTAAAAAAAAAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 62475709 62475708 62475774 62475709 62475708 62475774 66 CATTCAAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ..x.:....::.....:....:::.:.:..x..:.......:...:...x....:::x:::..... 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 21583038 NA +3339 chr4 + 190214555 84058765 84058764 84058857 93 AAGAAAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAG----AAAGAAAGAGAAAGA-AAGAAAGAAAGAAGCAATTTAGGAAAAA chr4 + 94230402 75241511 75241510 75241608 75241511 75241510 75241608 98 AGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAGTGGTCAAGTGACAA .:....x..:..xx.x...x............:..........:...x..----.:......x:...x.-...::.x..x....:::.:x..x:.x.. 50M4I15M1I28M 67/93 72.0% 98/94230402 0.0% 5/93 5.4% 8817254 NA +41812 chr4 + 190214555 84070254 84070253 84071401 1148 AGAAAAACTCCAACGAAACAATAGAAATTTTAAGCTGAAAGTGTTCCAGATCCCTCTGACAAAGAGCCTCCCGAGGATTACAATGCAGTCAATGTTGCTTTAATTAAATTTAATGCTGTGTGAAATGCACTCCAAGAAACTTTGATGAATGACTGGGGCAATTCACGGAGCTCACTAAAGGGCATCCAGCCCTTGCCGGGGTGTCAAGCCACGATGAATTGGTTAGTACAGGCATGTTTATAGACTGCCTCGGGAACCTCGTATCTGTGTGGTAATGTCAGAGATAATGTTATGATTCGCTGGACCTGAGGGGGCTTTGATGACACGGTTAATGAGATGTCCCAGAGAGCACCCCTGCAGGTTGTGCTCGGACCTCCCACATCAAAC-GAGCGGCCTTGCCCCTCCAGAG-CTGCTGCCCTCCAAATCCCTCAGCTGGGCTTTTCTTTCCTTAGGGTCTTTCTCCCTCTTTTC-TTTCTTTCCTTTTTTTTTTTTTTCCTTCTGAGTCTACATTCACTTTGTCTGGCTGTTGAAATTCAAAAGTTGTTAGTTTTTAATTTGGCTTCTTGTTGACCTGACAGTGAACAAAAGGCTTTCTGGGA-TTTGTGGAAAC-TAGG----------------------AGAG----AAAAGAAAAGGATGCTGGGGAAAGGATAAAGAAAAAAGAAAA-AGGACTCATGACCAAGAGAGGCAACATCTAAACATCACCCTGCTT--------------------------ACAAAAAACAAAGG--------TTCCCTGTAGACTTTGGTAGTAAAAT-GTGGTCATATTGTGGGAGAATGTGATTTTTAAAAACCTCAAATTTTATTTGCTTTACTGACATCTAAAAGAA-----------------------AAAAAATTAATTGATAAAAATTAAAAATTAGCCAAAACAAGCACATAAGCAAGCAATTCACTTA------TGATTATAAA-----GGACACTGTTGTGTTTTAACAGTTTTTCTCCTCATTATAATCTGTGGGTAGAAAAAAATCCTCCTGGGAATTGAAGAAAGAAATGGTAGCTGGTAAATAAACATGCTTG---GAATATATCTATCTCTGCAAAAAGTCCCCAGACAGGAAATGAACAGACAGTATTACCTCATTAAAGAGA-ATATGCATAGAAGGCAAAACAGAAGTATATCAAATAACCCTTCCTGAGAAAGAAAATTGTTTTGTTTATT--TTATACTTT chr4 + 94230402 48128303 48128302 48129468 48128303 48128302 48129468 1166 AAAAAAATCCCACCTAAACAATAGATACTT-AAGTAGAAAGTGTTCCAGCTCCTTCTGACAAAGAGCCTCCAGAGGATTACAATGCAGTCAATGTTGCTTTAATTAAATTTAATGCTGTGTGAAATGCACTCTGAGAAACTTTGATGAATGACTGGGGCAATTCATGCAGCTCACTAAAGGGCATCCAGCCCTTGCAGGGGTGTCAAGCCACGATGAATTGGTTAGTACAGGCATGTTTATAGACTGCCTAAGGAACCTTGTATCTGTGTGGTAATGTCAGAGATAATGTTATGATTCTCTGGACCTTGGGGGGCTTTGGTGACATGGTTAATGAGATAGCCCAGGGAGTGTCCCAGTAGGTTACTTGCAGACCTCCCACATCAAAAGGAGCAGCTTTGCCCCTTCTGAGCCTGCCGTCCTCTAGATCTCTCCGCTGGCCCTCGCTTTCCATAGGG--------CCACTTCTCGCCTCACTCCTCCCCCTTCTTTTGGGTTCTTAGTCAACATTAACTTCGTCTGCC----AAAATTCAAAAGTTGTTAGTTTTTAATTTGGTTTCTCTTTGACCTACC--TACAC-AATGGCTTTCGAGGATTTTATAGAAACACAAGCCACCACCATTACCCTCCTCCCAGAGCCTCAAAACAAA---------GAGAAAGAACAAGGAAAAAAGCAGCTTAGGCAGAGGGAGAAATGAGGAAACA---AAACTTAACTCTCCTTCTTTCTCTGTTCCCTCTCTCCGCACCACAAAAAAGAGAGGAATGTTTCTCTCATGCAGAGTTTGGTTACAAAGCAGTGGGC-TCTGCTGGTACAACCGGGTC---------------TTTTATCTGCT------GCACCCAAAGAAGTGGAGGGGGTGGGGGGGGGGAACAGTGGATCAATTGATAAA---TGAAAGTCTGT-------------TATTCAAGTG--TGATTTAAAGGGTTGATTATAGGTCTGTGGAAAAGGTTG---TTTAACAGTTTCTC------------TTTGTAGGGGGGAAAAACTCACTGTCGGTTTGGTTTAAAATGAGGTTAGGTGGCAAGTAAACATTCTTGTAATAATACAGCTATCTTTGCAAAA------CGGTCAGGAAATGGATATTTGGGATTACATCATTAAAGTGAGGCATACATCAAAGTAAATGCAAGACCATCTCAAATGATCCTTTCAAAATAAAAAAATCCTGAAGTTGCTTAATTGTACTTT .:.....::...x.x..........x.:..-...:x.............x...:.................x............................................................::...............................:.x............................x.....................................................x:.......:......................................x........x:..........:.....:............:x.....:...:::...x.:.....::x:x.:................x-....:..:........:.x...-....:.:....:.:...:...x.....x.:.:x......x.....--------..x...:..-::..x:....:::::..:....xxx....x....x.....x....:.....x.----:..............................:....:x.......:x.--.:x..-..x.......x:...-...:.:.....-:.:.----------------------....----....x...---------.:.....:.:..:........x.:x-x:.:.xx.x.:xx..:x....x....---....x.x..:..x...--------------------------........x.:...--------.::.x..:...x......x::...::-....x.-.x.xx...x.x..:xx.:.:---------------......:....------:..:.:...::.:-----------------------.:x::..:..........---.:...:.:x.:-------------..xx....::--.x.:...------........::-----...x.xx....---...........:..------------.:...:..x:.:.....x..x::x.x..xx.x.xxx...:x:.x.x...x...:..:.......x....---x....:.x......:.......------.:.x.........:.:.xx::.x.....x.........x..-::..:...x:...xx..x:..::.x:..x......:.:....:.x:.:x..:.....:x.xxx...xx..--..:...... 30M1D356M1I22M1I45M8D9M1I53M4D48M2D5M1D15M1I11M1I4M22I4M4I8M9D25M1I26M3D16M26I14M8I26M1I6M1D20M15D11M6D13M23I18M3D11M13D10M2D7M6I10M5I11M3D14M12D69M3I22M6D41M1I70M2I9M 822/1059 77.6% 1166/94230402 0.0% 196/1059 18.5% 35941951 NA +6886 chr4 + 190214555 84092376 84092375 84092527 152 AATGAAAAGCCCTATTTTAATACATTTGCCTGCTCTTGTTTTTTCACTTGACTTCCCAATCTAATTTCTTTGCTGCCAAGGGTTCTC--ACTCATATCACCATTTAAAATTTAAAAGCAATATATATTTAAATGCGAAACAAAATGCTTATATG chr4 + 94230402 48134130 48134129 48134283 48134130 48134129 48134283 154 AATAGAAAATGCTATTTTAATATTTTTCTGTTTTCTGGCTTTCTCGCTCGACTTCACAATCTAATTGCTCTGCTGCCAGAGATCCTCTTAGTCGCATCTGCTTTAAAAATTTAAAGGCAATATCCATTTACATGTAAAACAATATGGTTGAGTG ...::...::x...........:x...x:x.x:...x.:...:..:..:......x..........x..:........::.:.:...--.x..::...xx.x..x..........:.......x:.....x...::......x...x..:x:.. 87M2I65M 110/152 72.4% 154/94230402 0.0% 2/152 1.3% 35958246 NA +3017 chr4 + 190214555 84098716 84098715 84098766 51 AGGGGACAGGGTGAGACTCTGTCTTAAAAAAAAAAAAAAAAAAAAAGGAAA chr4 + 94230402 39747366 39747365 39747416 39747366 39747365 39747416 51 AGAGGAAAGGTTGAAAGTTTATGTTAAAAAAAGAGAAAAGAAAAAAGGAAA ..:...x...x...:.x.:.:.x.........:.:....:........... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 44351350 NA +17612 chr4 + 190214555 84110044 84110043 84110620 577 AAAATTTTACTTAATTTTTGTGGCCAAATGCAAAACATCTGACAAT-TTTGCCAAGAAAACCCAAATTGCCTTGTTCTGTTTGCATAAGCAAAAGAAAAAGTCCAGGATATCCATCTGCAAATCAACATCAAAGGCTTTCCACAAAATACGGGGAGGGTGACTTGTATTTGGAGAA-CAGCATGAGATCTTTCTGTTGCTAGGGCACTGCTGGCTGCAGCTTTCTACACTAATCATGGTCAAGGGCAACTGAGGTTTATGTGTCTATATTGCTGAGGTAGCTTGTCTTTTCAAGCTGAAACTCACAGCTCTCTGCCTTTTGCCCACTCCTCCACCCTTTGACATCTGTTAATGATGGAGATTCACAGCACATTTTCTATGAAATGAAACCATTCTAAAAACTTTTATAAAGTCAAAGGT------TTTGGAAAAAAGGAGAAAAAGTCATTGAGTAAACACATCTTTTTTGAGACCTGATCCTAATAA-------GCCTCATATGAGTTATTCCGTGCATATAAAATTTACTCCACAGAATTATGGTCTTGATAC---CTGACCAGAAAGCCTCTATTTCTTTCTCATTATTAAC chr4 + 94230402 48136706 48136705 48137245 48136706 48136705 48137245 540 AAAGATTTACTTAATTTTCATTGCTGCACATAAAACATCTGACAGTATTTGCCAAGAAAACTAAAAT-GCCTCTCTTTGTTTGCACAAGCCAAAGGAAAAGTACAGTGTATCCGTCTGCAAACGAACATCAAAGCACTTCTGCAAAAT-CAAGGATGGTGACATATATTTGGAGAAACAGTATGAGAGCTGCTTGTCA----GAGAGTGATGG----GGGTCTCTGCACTTACCAAGCATAATCCCGATTGGAG---------CCACAT-----------CTTTTCTTT--------------------CTTCTCTTTATTATCACTTCGTGG----TTAACATTTGTTGACGAGTAGGATTAACAGCACATTTTCAATGACATTTAGCTCTTTTAACAAGCTCTCTGCTGTCAAAGGTGGCTGGCCTGGAAAAAAAGAGAAAA-GTCATTAAGCAAACAAATCTTTGCCAAGAGTTGATGCTAAACATACCATCACCCTGTGTGAGTTATTCACTGTATATGAAATTTATTCCACAAGACTGTGACCTTGGTGTTGATTAACCAGAAATCCCTTCTTTTTCTGTCATTATTAAC ...:x.............::.x..::x.:::.............:.-..............:x....-....:x:.:........:....x....:......x...x:.....:........:x..........xx:...::......-.::...x......x.:...........-...:......x..x::...::----.:x.x..x...----:.x.:...:....x.:..x.xx:..xxx.:.:..::.---------.:.:..-----------...x.....--------------------..::x.:..x.xx:....:.x:x:----..:....:....:.:..xx::....x.............x....x..xx.:.:x..:...x..x:.:.x.:xx.........------::.........:.......-......:..:.....x......x:::...x:....x....xx.-------:..:::.:..........xx..:....:.......:......::.:.:..::....:.::---:.:........x..::.x...:.:.x........... 46M1I20M1D80M1D27M1I21M4D11M4D37M9D6M11D9M20D24M4D82M6I19M1D43M7I60M3I37M 373/522 71.5% 540/94230402 0.0% 73/522 14.0% 35973338 NA +3046 chr4 + 190214555 84111856 84111855 84111928 73 TTTGAATATCTTATTTTGTGAAGTATCTATTTAAGACTTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTGAGAT chr4 + 94230402 44165338 44165337 44165410 44165338 44165337 44165410 73 TTTAAAAATCTTAGCCATTACTGGATTTATTAAAAACGTTCATCTTTTTTTTGTCTTTTTTTTTTTTTAATAT ...:..x......x::xx.:xx.x..:....x..:..x..:::.........x.:.............:.x.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 39946518 NA +3022 chr4 + 190214555 84116838 84116837 84116887 50 GGTTTTGAGTGAGTTTCTTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 45847265 45847264 45847314 45847265 45847264 45847314 50 GGCTTTAAGCTGGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTT ..:...:..:x:...x.:....x.:...:...:................. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 38269573 NA +3038 chr4 + 190214555 84125543 84125542 84125603 61 AAAAAAAAAAAAAAAAAAAAAAAAAAATCAACATAATTACAAGTAGAAAAAGACAAACACA chr4 + 94230402 78347566 78347565 78347626 78347566 78347565 78347626 61 AAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACA ....x..x....x...x..:.......:.....:.......x:..x.x.x.x...x..... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 5777977 NA +8619 chr4 + 190214555 84146629 84146628 84146931 303 CAGAGGGTTAAAGAGGAATGAGCTGAATTCCATCCATATT-----------------CAGGGCCTG------TGCCGACGTCCTCCCTGGGTTTAATGCTCCATATGGTTTGGCACAGTGACATTACTTCT--------------------CCTGCTA---AAATACCCCTTAGCCTGTGTGGCATCCATCAGTTTGCTTGTTGACTTAGTTTCATTTTCTGTTTTCATGGCCTGCTCAACTGCCTGCAAAAGCATTAAATTATTCTTCTGATCTTTCCATCTCCCTGGGTTCACAAACTGCAATTTATGGAAGTCTTTAAAACTTAAAGGGCTTTCTGAT--AAAGGTAG chr4 + 94230402 48141542 48141541 48141884 48141542 48141541 48141884 343 CATAAGGTAGAAGAG-AATAAGCTGAGCTGTATCTGTATTAGCTATATCTGCTATATCAGAATTAGCGGTACTGTTGATACACTTAATATTTTTAATGCCTGTTATGGCCTGGTGTAATTGGCTTCCTTCTGGTGTCTGTGAGTGAGGAAACTTGCAACCTACATAGAACACAGCCTGTGTGGCATCGAC----TCCCCTGTTGATTTAGTTTCATTTCCTGTTTATCTGGCTCGCTCAACTGCCTGTAACAGCATTAAAGTGTTCTTCTGATCTTT--GTCTCCATGTGTTCACAAAATGCACTTTTTGAAAGCCTTC-GTGCCAAAGGGACATTCTGACTGAGAGGCAG ..x.:...x:.....-...:......::.x:...::....-----------------...::::x.------..::..:::x..:xx.:xx........::xx.....::...:::.:.x:xx..x.....--------------------.:...x.---.x...xxx.x:...............x.:----.:x.:......:............:......x:x....::.............:..x.........x.:..............--:.....x..x.........x....x...x..:...:...:-:x:.:x..:..:.x......:--.:...:.. 15M1D24M17I9M6I59M20I7M3I29M4D83M2D40M1D21M2I8M 208/295 70.5% 343/94230402 0.0% 56/295 19.0% 36005087 NA +3155 chr4 + 190214555 84156001 84156000 84156091 91 CAGAACACTGTGCTGCATTTATTTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATA chr4 + 94230402 85834512 85834511 85834602 85834512 85834511 85834602 91 CAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .....:::x..x:x.xx...x.x.x::.x.....x.............:.:...xx..:..x::...:....:..x...:..:.x...::. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% -1678511 -92551891 +3076 chr4 + 190214555 84156011 84156010 84156088 78 TGCTGCATTTATTTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTAT chr4 + 94230402 39937172 39937171 39937249 39937172 39937171 39937249 78 TGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ....::..x...x.....::...x......::xxx.x..:...:xxx:...:.:...:.......:...x..:..:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 44218839 NA +3930 chr4 + 190214555 84156017 84156016 84156091 75 ATTTATTTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATA chr4 + 94230402 85834534 85834533 85834608 85834534 85834533 85834608 75 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ...:........x.................:.xx..:..x::...:....:..x...:..:.x...::::.:... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% -1678517 -92551885 +3762 chr4 + 190214555 84156018 84156017 84156092 75 TTTATT--TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATAT chr4 + 94230402 85834531 85834530 85834607 85834531 85834530 85834607 77 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ......--.x.....x...................xx..:..x::...:....:..x...:..:.x....:.:.:.. 6M2I69M 58/75 77.3% 77/94230402 0.0% 2/75 2.7% -1678513 -92551889 +3159 chr4 + 190214555 84156024 84156023 84156091 68 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATA chr4 + 94230402 79265522 79265521 79265589 79265522 79265521 79265589 68 TGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ..........::........xx........:...:.::.:.::.:.:::.x.:....x.:...x:.:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 4890502 NA +3296 chr4 + 190214555 84156024 84156023 84156135 112 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATATGTCACTACCACCCCAGTAGACCATGAGCCTCTTAAG---ACAAATG chr4 + 94230402 79265520 79265519 79265633 79265520 79265519 79265633 114 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGC-CTTTTTGAGTGTACAAATG ............::........xx.:......:...:.::.:.::.:.:::.x.:....x...:.x:.::x...:x.:.:x:x.:.:x..:x..x-.:.:..:..---....... 95M1D9M3I7M 70/111 63.1% 114/94230402 0.0% 4/111 3.6% 4890504 NA +3293 chr4 + 190214555 84156024 84156023 84156091 68 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATA chr4 + 94230402 85834543 85834542 85834610 85834543 85834542 85834610 68 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x.................:.xx..:..x::...:....:..x...:..:.x...::.:::...:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -1678519 -92551883 +3202 chr4 + 190214555 84156025 84156024 84156090 66 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.:. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 4890506 NA +3275 chr4 + 190214555 84156028 84156027 84156090 63 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATAT chr4 + 94230402 70094148 70094147 70094210 70094148 70094147 70094210 63 TATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .:.......x...x...x.....:.....:......x.:.xx.x:...x.........:.:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 14061880 NA +3193 chr4 + 190214555 84156028 84156027 84156094 67 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGTATATATGT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x...............:...xx..:..x::...:....:..x...:..:.x.:.::.:.::. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -1678513 -92551889 +3255 chr4 + 190214555 84159164 84159163 84159211 48 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTACACGTGTGTAC chr4 + 94230402 79265519 79265518 79265566 79265519 79265518 79265566 48 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCAC .............::........xx...:..:.::..........:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 4893645 NA +3054 chr4 + 190214555 84159167 84159166 84159239 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTACACGTGTGTACCAATTTAATATTTAGTTTATTCAAAAGT chr4 + 94230402 72321894 72321893 72321966 72321894 72321893 72321966 73 TGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACATTTTAATATATATTTCAGAAAAAAAT .....xx:.................:.....:..:.:x..xx:xx..x........x..x..:.xxx....:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 11837273 NA +19815 chr4 + 190214555 84167281 84167280 84167783 503 CCTCTGG--AAGCTGTTAGGATAAGAGCTAATGTGGGCTGTGCCACACAA-AGGTGATGGCAAATTGATGAGCCTGTAAAGAGATTCAGAGGCAAATAGGGAAATGCATTGTTAATGCTATTAAATATTACTTAG-CCTACAGCAAGCTGCATGTTCAACAGTTTAAACTTTAATTGCTAGCTGATGCAGAAACAAGCCTGGATATATGTAAATCCTATTGAAAGCTAATATCATTTTGGCTGCTTAGATGGATTAGCAGCCACTACAATTAGCAGCATGTGCAACTAATGATATTAGGGGAGAATCCATCATGCAGTGGTCTAG---GCCTTTAAATCTG-----AAAAGAAGTTAAGGCTCTTTTCCCCACAGAAACCCCACACTGGGGAGTCTTGCCAATTGATGCAGCAGACTCTA------------------GAGTGAGCCAAGAAGCTTATAGAATGCAGGAGCCTGACTCCACTATCACCTTGAATTGTTCTTCTTTTT--------GCCCTCTACCGGCAATTCTAGCTAAG chr4 + 94230402 48163957 48163956 48164472 48163957 48163956 48164472 516 CCTCTGGGGAGGCTGTTGGGAGGGGAGCACATGGCTGCTGTGCCATGCAGCAGGCCTCAG--GATCAATGAGCCTCTAAAGAGATCCTGGGGCTGATGGGGAAGTGCACTGTTAATGCTATTAGACATTACTTAGGCCTACAGCAAGCTGCATATTCAACAGTTTAAACTGTAATTGCTAACTGATACAGAAATACGACAGAGTATATGTAAATCCTGTTGAAAACTAATATAATTTTAGCTTCTCAGCTGGATTAGCAGCCTCTGCAATTAGCAGTATGTGGAGCTGGTGATGTTAGCAGAGAATCCATCAGACAGGGCTGTAGGGTGCATGTAAATTTGTGTTCAATAGAAGT---GCCTCTTTTTCCAGTTGA------------GGGGATATTGCCA---GATAAGGCAGAGCCAATGTTGTGTCCCAGTGGAGGAAGGAGGCCAGGAGCTGCAGGAAT---GGGACCTACCTC--CTGTCACCTTGAGGTTTTCTTCCTTTTCTCATTAGGTTCATGGCCTGCGGTTCCATCTGAG .......--.:......:...x::....xx...xxx.........::..:-...:xx::.--:..::........x.........:.x.:...x:..:.....:....:..............:.:.........-.................:................x.........:.....:......:.x.x.x.::..............:......:.......x.....:...x..:..x.............x..:..........:.....x.:..::....:....x:............x:...x.x.x...---..x.x.....:..-----..x......---.x.......:..x::x..------------...::.x......---...:x:.....x:.x.------------------..:x...x.x..:....xxx:....---..::...:x...--..:.........:x.x......:....--------.::.x:x:..x..::...:.x..:.. 7M2I41M1I9M2D73M1I189M3I13M5I9M3D18M12D13M3D16M18I25M3D12M2D27M8I26M 365/478 76.4% 516/94230402 0.0% 63/478 13.2% 36003324 NA +3300 chr4 + 190214555 84169945 84169944 84170017 73 CTTTTTTTACATATATGTGTGTATATATATTTACATATATGTATATATACACATAAATGTATA----TGTAGGTATA chr4 + 94230402 40388204 40388203 40388280 40388204 40388203 40388280 77 CTCTCTTTAGTTTTGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA ..:.:....xx.x.:.....:.:.:.x...:.....:....:....:.:..:.:......:..----....:x.... 63M4I10M 53/73 72.6% 77/94230402 0.0% 4/73 5.5% 43781741 NA +6745 chr4 + 190214555 84178200 84178199 84178411 212 CAGGCCTGCAGCTTAAAACATCCCTGTGGCGGCCTGATGATTAAC-TCAGCAGCTTGAGCTATTCCAAATGTTGCTCTCTTGTCGGAGAAAAAGAATAAATACATTGGGTGTGAGTGATGGCCAGCAAGGGAAAG---CTGGGATG--------------TTTGCATAGCCTCAGTTTTCTGTGAGCTGAACAGCTTT---------------CCAAAGCCACTTTTTTTTCCTCTCCAGATGTT chr4 + 94230402 48171202 48171201 48171444 48171202 48171201 48171444 243 CAGACCCACCACATAACAACCACAGGTGCTGTCCTGATGATTAACGTTGGCTGTTTGAAATAATCCAAATGCTGCTCTCTGATCTGATAAAA-GAATAAATACATTGGGTGTGAGTGATGG-GAGCTAGGGGGAGGAACAGGGAGGGGACAGGGACAGGTTTTTGTCAGGCTCAGTTTTCTGAAAATGGAACAGCTTTTGAGGAAAAAAAGAACTATATATATATATTTTTTTTCTACAGATGTT ...:..::.x:.x...x.xx:x.xx...x:.x.............-.::..x.:....:x..x........:........x:..x..x....-............................-x...x....::..---.x....x.--------------...xxx:..x............x:.::x..........---------------.:.x.xx:.:x.x.....::...x........ 45M1I46M1D28M1D13M3I8M14I38M15I32M 155/210 73.8% 243/94230402 0.0% 35/210 16.7% 36006998 NA +14201 chr4 + 190214555 84184001 84184000 84184395 395 TTCCTTAGCCTCCCTACCCTTCTACCCTTTCATCCCATAGATCAAGTCACTCATCCAAATACTGCTTTGTTAATGTTTTCCTGACAGGGCTG--TTCAATGATAATTTGTTACAAGGAAGCCCGTAAATGACTTTTAATTGTAGTAGCTACTATCCCATGCTATCATTTAAATCTCGATGGTTGTCGCTTCCTCCTCCTCACTCAGAAAAAATACAACATTTTCCCCTCT-GAACATCTGCATTAGCACATAGTTTATGCTTTTCTGGGATAGGTTAAGTAAGTTACAAAATGCTAGTTTCTGGAATTATTATCTGATGTGAATTGGTCTGAGTAGGGAAAAAATCCCTCTCTCTATAAT-CTCTCTAAGCATAATCTGTATATAAAAGACACAATGCA chr4 + 94230402 48174565 48174564 48174950 48174565 48174564 48174950 386 TTTTTTTTTTTTCCTGATCTTTTCTCCCTCC------TGACTTAAGCTACTGGTCCAGCTATTAATTTGTT------TTCCTGATGGAGTAGCATACAATGATAATTTGTTACTGTGGAGCCCATAA-TGACTTTTAATTGTGGCTCCTAATGTCACACGCTGTCATTTAAATCCCAATGGCTGTCACTTCCTCGTTCTCTCCCAGAGAAAATACGGCTTTTTCCCCCTTCAAACATCTGCATTAGCACACAGTTTATGCCTGCCTTGCTTGGGCTAAGTGAGTCACAGAATGCCAGCTCCTCAAATTATTAGCTTCTCTGACTTAGCCATTGTGGAAAAATAAGCATCATCTATTTGTTACTTTCAGTGGACTCTCAGGATACAAAAGAAATATTGCA ..::..xx::.:...:x:...:.x:..:.:.------.::x.:...::...x:....:x..:.:x......------.......::.:.:x.--.x.................x:x.:.....:...-..............:.:xx...x.:..x..:...:...........:.:....:....:.......x.:...x.:....:.......::.x........::.-:..................:.........:.x:..x.xx.:..:.....:...:...:.....:..:.:..x:........x..xx.x...x..:.:.xxx..:.::...x..x.x::x...x.x.:x.-..:..x:x.x.:xx..x.x...:......x.:.x.... 31M6D34M6D15M2I33M1D102M1I129M1I38M 265/382 69.4% 386/94230402 0.0% 17/382 4.5% 36009436 NA +3060 chr4 + 190214555 84194168 84194167 84194236 69 AGGAAAATATGTGTGTGTGTGTGTGTGTGCATGTATGTATATACACATATATACATACATATTCATATA chr4 + 94230402 68837071 68837070 68837139 68837071 68837070 68837139 69 AGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCA ......x..x..x:xx..:x.x::......:...:...:.:......:.x...........:x...::. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 15357097 NA +3210 chr4 + 190214555 84194173 84194172 84194235 63 AATATGTGTGTGTGTGTGTGTGTGCATGTATGTATATACACATATATACAT----ACATATTCATAT chr4 + 94230402 79265518 79265517 79265584 79265518 79265517 79265584 67 AGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .:.:..........::........xx.....:..:......:.:.::...:----.......::.:. 51M4I12M 47/63 74.6% 67/94230402 0.0% 4/63 6.3% 4928655 NA +3485 chr4 + 190214555 84194175 84194174 84194236 62 TATGTGTGTGTGTGTGTGTGTGCATGTATGTATATACACATATATACATACATATTCATATA chr4 + 94230402 85834541 85834540 85834602 85834541 85834540 85834602 62 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .:...x................:..xx.....x::.:......:..x......:..:..::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -1640366 -92590036 +10902 chr4 + 190214555 84197483 84197482 84197684 202 TTGGCAGCCAAAAAAGGTGCTGTATATTAGCTACTATGATGTAAAACGGCCCAGTAGAGATCAGTGTAACATCTGCCTTGGTCATTTTTTGCATGTCTACATATTCATGCCCAGCTTTCAGAATTCTCTGGAGACACTCGAGTATATAGGAAGATGAGTTCCAATGAGCTGC-AGCCTCCTGCT-TTGCTGAAGGGATATAAAA chr4 + 94230402 48176680 48176679 48176883 48176680 48176679 48176883 204 TTGGCAGCTGGAAAGGATGCTATAGGTTAGTTTCTGTGATCTGAGATGCCCCAGCAGAGATCAGTGCAACATCTGCTTTGCTTGCCTGGTGCATACCTACATATTCATGCACAGCTTTCTGAACTCTCAGGAGACACTTGCATGTTTAGGAAGAAGAGTTCCAGTGAGCCGTAAACCTCCTGCTAGAGCTGATGGGAGATGAAA ........:::...:.:....:..x:....:.x..:....x.:.:.:.x.....:...........:.........:...x.::::.xx.....::..............x........x...:....x.........:.x:.:.x........x........:.....:.:-.:.........-xx.....x....x..:... 172M1I11M1I19M 155/202 76.7% 204/94230402 0.0% 2/202 1.0% 36020803 NA +10403 chr4 + 190214555 84220137 84220136 84220588 452 CCCAGATCAGGATTTATATAATGGATTTTGGTTTTGTAAAAGGTACTCATAACTCTTGTTAAATTTCTGCATGTTTTTT----CTTTAATTCAAGTTTACCAAAGATAGGGAATGGGGCTAACCCAAAGGTAAAAGCAGGAACAAAGTGAATAAAGTGTTTCTCTATTT--TGATAAGGGCACTGGGTTAACACGTGAATGTTGGTGTTGATGTCAACATCCCAAGTCAAAGTTAAACATGGCTGGGCTGCTCTTACTTCAGATTTGGGTGACATTTTTCCCGGTTAATGAACATTTCCTTTTCT---GCAAAAGAAAGGTTTTGTCTTAAGTTCCATGGCTTTGGGCCAAAAAGAGATCTTTTCTTCTCTCTTTGCCTTTACCCTTTAACAAAAACAATGAAATTCCTTCTTTTTCATAATTATCTTTGTATTTCTGTTAATGTCCTTTT----ACTTTCATTT chr4 + 94230402 48179483 48179482 48179913 48179483 48179482 48179913 431 CCTGAAGTAGGATTTA-GTAA--GATTCTTGTGCTCTAAAAAGTACTCATAATTTTTGCTTAATTTCTACATGTTTTCTAGCACTTTAATAGTAGTACGACAAAG-TAGAG----GGACTAATCTCA-GTTAAAAGTAGAAATGCCAAGATTAAAGTGCACTTCTGTTTATTTTTAAGGGCAGTAGGTTAATATGAGAGCTCTATTGTTGATGTCAGCATCACAAGCCAAAGATAAACACCACTTTTCTGCACTTAGATCACATTTTCAGAACATTATTCTTCGTTAATGAGTATTTTCTTCTGCTAAGAAAACGAATGACTTAGTCATATGCTTATTGGCT----ACCAATATTAG-----------TCATTTCACAGCTGTTCTGTAA----------AATATTTACTCTATTCTGTGATGATCTTTTCTTTTATTTCACCATCTTTTTTTAAATTTTCATTT ..:::.x:........-:...--....:.x..x:.x.....:..........:.:...:.x.......:........:.----.......xxx...x::x.....-...:.----..:....:.:x.-.x......:..:..::xx:x..x.......:x::...:...--.xx........x.:......:.:.x..::x:.:x...........:....x....:.....x......:x:..xxx....x....xx...x....xx:x:.....x...::x........::....:...:.x:---.x...x...x.::..x...x..x.:.:xx.....----:....x.xx..-----------..x:..::.xx:.:::..x...----------:.x...:x:...x..:::.:..x......x:x...x.x.:.x::..:....----.:........ 16M1D4M2D56M4I22M1D5M4D12M1D41M2I134M3I34M4D11M11D22M10D51M4I10M 282/418 67.5% 431/94230402 0.0% 47/418 11.2% 36040654 NA +18660 chr4 + 190214555 84232381 84232380 84232754 374 ATCAGAATTTTCATTAGGA----GAAGGAGAAAATAAAAATGGGCCTGGGACACAGATCTGTGAGGTATGGATGTGCAGAGTCCCACATGAGCCTGACGCCTCTGAGCGTTAACACATGGTCCCCC-ATCAAAGGTCTGTATATGCAACTCAGCTGCTGCCCTGACAGAAGATTTGGTGTTGTTAACACACACTTCATTAAAATACCAGCTAAAATCCAAGTTCCAAATCCCACAGTTTGTGTTAGTTGATAAAACTCAATTGCTTCTAATTACTGTTAGTGCAGCTTTAAAATAATATTTTGTTGTAATAAAGGACTCAATATGACAAGTGAGAATTGGCCCGCTGAACTGGAAACACCAGGCCAGAGGGAATGTGTG chr4 + 94230402 48186579 48186578 48186951 48186579 48186578 48186951 373 ATCAGGTCCTTCGCTGGGGTGGGAAAGGAGGTTA-GAAAATTGACCTAAGTGATGGATCTATGGACTGCTGGTGTGTATG----CTCATGTGCTGTAAGCATCTGAGTGTTAACACATGGTCTCCCTACCAAAGGTCTGTATATGAAACTCAGCTGCTGGAGTGACAGAAGATTTTGTGTTGTTAGCGCACACTTCATTAAAATACCAGCTGAAATCCAAGTCTGAAATCCCACAGTTTGTGTTAGTTGATAAAACTCGATTGCCTCTAATTACTGTTAGTATGGCTTTAAAATAATATTTTGTTGTAGTAAAGGTCCCTTTGTGATGAGGAATAGCTGGTATTCAGAAGTGGAAAC-TTGGGAAAGAGTGAAAATATG .....:x::...::.:..:----:......:xx.-:.....x.:...::.xx.::.....:..::x.::x.:....:.x:----.x....x..:xx.x..x......:..............:...-.:................x.............xxx.............x.........:.:.......................:..........::x.................................:.....:................:::........................:......x.:.xx.:...::..x:.x.::...:x:x.x...x.......-:::..xx....x...x:.:.. 19M4I11M1D45M4D42M1I230M1D21M 282/368 76.6% 373/94230402 0.0% 11/368 3.0% 36045802 NA +14417 chr4 + 190214555 84238499 84238498 84238812 314 TAAATTGTTACAGAAACCTATCTAGAACTTAAAAGTTATTCTGGCATCTGGCTGAAAGTTACTGTGAGCATTCTAGAAGAATTTCAATAGGAATAGAAAGGACGGGGAAGTGAGTAAAGTCATTTCAGAACCATTCTTGAAGGGTAATACTGGCGTTCCGGAGGGATTTCAGTGCTCAGCTAGAGGGCAGCAGAATTATTGCTGAAGTATTCCTTGTGGAGAGCTTTAACCTCATGGCCGAAATGCATTCAAAACAATTCTGCTGTGATAGTAAAAAATATATATCCATGCTGTGCATTCCCAGAAGAGCATTT chr4 + 94230402 48189172 48189171 48189473 48189172 48189171 48189473 302 TAAATCAGTATTGAAACCCTTCCAGAACATGAAAGTTATTCTGGCATCTTGCTGAAGGTTAACTTTAGCATTCTGGAAGGATTTCAATAGTAATGAAAAGAACAGTAAAGTGAGTAAAGCTATTTCAGAAACACTTCTGAAGGATAATGCTAGCCTGTTAGGGAGACTTGAACAGTAGGCTAGAGGGCAGCAAAATTATTTCTGAAGTATTCCTGAAGGAGAACTTTA-----ATAATCTAGTAGTATTTAAAATAGTTCTGCTATGGTGGT-AAAACTATATGGCAA------GCATCCCTGGCAGGTAATTT .....::x..:x......:x..:.....x.:..................x......:....x:x.x........:....:..........x...::....:..:.x:............::.........x..:.::......:....:..:..x.x:::.:.:..:..x.:::x.x:..............:.......x.............x:x.....:.....-----..:::.x.:xx.:...:....:.:.......:..:.:..-....x.....:x.x.------....:..::.x..:xx.... 228M5D39M1D15M6D20M 222/302 73.5% 302/94230402 0.0% 12/302 4.0% 36049327 NA +7538 chr4 + 190214555 84253099 84253098 84253270 172 TACTAACACGACAACCCTTGGTTTGGTTGCAGTAGCAAGCTCCACTCTAATCATTCAGCTGAACAAACAAAACCCAGGATTTTGTTATTTTCCCAGAAACTAGGTAAACAGCCACTTCCCTTTTAGT-TCTCTTTTTAAAGTAAGAAGGTCCACATCTCTCCTAATCATCACT chr4 + 94230402 48193237 48193236 48193398 48193237 48193236 48193398 162 TGCTGACACAAC---------CTTAAGTGTAGAAGCAAATGCTATTCTAATAATTCAGCTGAATAAATACCAGCCAGCATTTAGTTATTTTCCCAGGAACTGGATAAACAGCCACTTCCTTTATAGTGTCTCTTTGTGAAGTAAAAA--TTCCCTAGCCTGCTAATCATCACT .:..:....:..---------:..::x..:..x.....::x.:.:......x...........:...:.xx.x....x....x.............:....:.:...............:..x....-.......x.:......:..--.:.x.xxx:..x............ 12M9D106M1I19M2D24M 124/161 77.0% 162/94230402 0.0% 12/161 7.5% 36059862 NA +15660 chr4 + 190214555 84276792 84276791 84277121 330 TGATTCTTCATTCTCAG---CTTATTTTTGGTTGTAATCTATGAAATCAGTGAAACTGAAGAAGTTGCAGATGAATTGCTTGTGAACTGATTTATGATCTTTATTGCACCAGAGAAGTAATTGTATGCATACAACTTCCTTTTACAATTACCTCCAC-ATGATTTCAAAGCAATTCACTGCCTATGGGAGGAGGCCATCAATAAGTGACACTTGCATATTCATTCATTTCAATATGAGAGTTTTTAAAGGCTCAGGGGAATAGTTCAGTGCTATTGAAAATTACTTTTCTTCCATCAGGATTTTTCTAATTGTTTTTGTTTTTGTTTTTTAGAG chr4 + 94230402 48198598 48198597 48198918 48198598 48198597 48198918 321 TAATCATTCAACTTTAGGTATTTATGTATAGATACATATTTTTAAATCTTCTAGATTGAAATAGTTGTGGATAGATTGATTGTGAACTGATTTATGATCCGTATTGCACCAGAGAAGTAATTTTATGCATATAACTT-CTTTTACAATTACCTCCACAATGATTTCAAAGGATTTCACTGCTTGTG---GGAGGCCGTCAATAAGTGGCACTTGCATATTCATCCATTTCAATCTGAGA-TTTTTAAAGACCTGAGGGAATAGAACAGAACCACTGGAAATTAATTTTTTTCAGCAAG---TTTGCT-----TTTTCATTTTTTTTTTTTAGGG .:..:x....x::.:..---:....x.x.:.x.::.xx:.x.x.....xx:x.:.:....:x.....::...::....x....................:x.....................x........:.....-...................-............x.x........:.:..---.......:..........:...............:.........x.....-.........:.::::........xx...x:.:.:..:......x....:...x::x..---...x..-----....::.....x........:. 17M3I117M1D19M1I28M3D50M1D58M3D6M5D22M 250/317 78.9% 321/94230402 0.0% 17/317 5.4% 36078194 NA +7586 chr4 + 190214555 84282459 84282458 84282698 240 GCAAGCAGTGTCTCTTGCCTGAGAACAGTTTCTGTTAAGCAAGGTAAACACACATTAATTGACCCTGAATAGCTGATGGACTGAGAG--AGAAATGTAGAGTTTGTGATA-CAAAATCCA-------------AGCAGATGCCCTTTCTGAGTTTTCATTATTTGCTAAAGAAGTTGGCCACCTAATCCCATAGAAATGTATGTAACGTTTTGGTTTTGATAAGCTCTCAATCATTATGGGTCTTGGTTCAGCTGA chr4 + 94230402 48200195 48200194 48200444 48200195 48200194 48200444 250 GCAAGCTATGTCTTTTTCATGGAGATGATTTCTGTTGAGCAAGGAAAACTCAGGTTAATTAGGCCAAATAAGCTGATGCAGTCAGAGGCAGAGACGCAGAGGTTGCAAGATTGAAATCCATCAAGACACTGTCGACAGATGCCCTCT-----TGTTTGTTATTTGCTAGGGAGGGTGGCCACATAAATGTATAGAAATATATTT-ATTTTTTTGTTACAATGAGTGCACCATTGTAGGAGGTCTTAATTCAGTAGA ......x:.....:..x.x..:::.:::........:.......x....x..x:......::x..x:.xx........x.x.x....--...:.:.:....x...::.x.-::.......-------------::..........:.-----.x..::..........::..:.x.......x...x:x:........:...x.-.:x....x...x::..:..:x.x.x..::.x:x:......::.....:x.. 87M2I21M1I9M13I14M5D52M1D51M 161/234 68.8% 250/94230402 0.0% 22/234 9.4% 36082264 NA +3257 chr4 + 190214555 84308735 84308734 84308804 70 CATGGTGGCTCACACCTGTAGTCCCAGCTACTTGGAAGACTGAGGCAGAAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:x...:--......:...........:...:.....x.xx:x...x::.........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 8275538 NA +30436 chr4 + 190214555 84312364 84312363 84312855 492 GTTGACATTAGATGGAAATTGCAGCCAAGTGAATTCTCCATATTGTAACCCTATTATCTCTCTCTCCCTTCATCTATCTCGCCTG-TGCTGTGCATGGTTGGGCCTTATGGAAAGTTATCATTTGGATGCAAAACAATTATACTAAAACAGTTAGCCAGAGTGGTCTGGACACACAGATTTATCTTCCCTCT-----TCTTCAGTGAAGAACATCTATCTTCCATGACCTCTTGATTACTGAAGCCTTCAGAATATATTCTTTGGTCTGTGACACTGTGCATGGTGCTGGGCTGAGCATTAAATATCACCCTCTATGATTAATTGGAAGTTAATTAAATCTATCACTGAAACAATGGGAAGGCAATGAGCTATGTAATCATTGCAATAGTAAATGAAATGATGTACAGGTCTCTCCATCTCGCTTATTGACAATGATGGAGGGGTGGCCGGCCTCGGATGCCTGGCGAGGCTTGCTGCCTGACCTCACAGGCCAGCTC chr4 + 94230402 48204775 48204774 48205269 48204775 48204774 48205269 495 GCTGCCCTCAGATAGGAATTACAGCCCTATGGAGTCTCTAAGATG--ATCCTATTACCTGCCCCTTGCCTCCTCCCTTTTATCTGGCTTTGTGCATGGATGGGCCTTTTGGAAAGTTATAATTTGGATGTGAAACGATTATCCTAAAACAGTTAGCTAGAGCAGAGCAGACGCACAAATTTATCTTCTCTCTCTCTCTTTTTGGTGAGCAACATCTATCTTCCATGACCTCTTGATTACTGAAGCCTTCAAAATATATTCTTTGGTCTGTGACACTGCGCTTGGTGCAGGGCTGAGCATTAAATATCACCCTCTGTGATTAATTGGAAGTTAATTAAATCTATCACTGAAACAATGAGAAGGCAATGATCTATGTAATCATTGAAATAGTAAATGAAATGATGTAAGGGTC-CTCTGTTTCACTTAGTGACAGTGATGGAGGGGTGCCCGAGCCCGGCTGCTCAGCTGTGTTTTCTGCCTGACCACCCAGGCCTGCTC .:..x.x.:....:.:....:.....xx:..:.x....:.x:x..--.:.......:..x:.:..:x.:..x..:x.:.:::...-:x:.........x........x...........x.........::....:.....x..............:....::.xx::...:....:..........:....-----.:..::....:x.........................................:..........................:..x......x..........................:.........................................:...........x..............x.....................x:....-...::.:..:....x.....:.............x...:x.:...x...:::..x:x.:..x..........x.x......x.... 45M2D38M1I106M5I214M1D86M 401/489 82.0% 495/94230402 0.0% 9/489 1.8% 36107589 NA +5441 chr4 + 190214555 84320186 84320185 84320430 245 TCACCATAATACCTAGGCATTCATGTGGAC--AACATCATTTC-ATCATAAATGAGAAGGTCGTCCTATTGAAC--TGTAATCCATTCATTGATTTATGGTCCCAAGTTCCTCCAAGGATTTTCACAAATGCCTGTGATGATTCCTAGTGCTGGACTTTGCATTTGGATCTGTGATTTAGATGACAGATGCGTGAAATCATATGTAGCCAGACAAATCCCTGGTGATAACACATTTGAGGGGGCTCAAGA chr4 + 94230402 36951704 36951703 36951949 36951704 36951703 36951949 246 TCTCTGTGGTTCTTAAGCACTTTAGTAAAATGAAGATCATATCTGTCAGAGATGGA---GTGGTGTTATGGATCAGTGTAATTGATGCATTGGTTTATATACCCAAAGTCCTTTAGAGGGTGCCACAAATATTTATGAAGTCTTTGAGCATTTAATTTTACACC-AGATCTGTAAATTAACTGAAAGATGTGTAAAAATTCATACAGTGAGACAGCTCCCTCCTGGCTACATACACGAAGTGCCTCAGGA ..x.::.::.x.:..:...:.:xx..::.x--..x.....x..-:...x.:...::---..x..x:...x..x.--......:x..x.....:.....:xx.....:x....::.::.:x.x:.......:::.:...x.x:.::x..:::.x:.:...:..::-:.......:.x...:x...x.....:..:...x:x:..::..:x.....:x.....xx..::x...:.:x:..:.x.x....:.. 30M2I11M1I12M3D15M2I88M1D85M 147/241 61.0% 246/94230402 0.0% 9/241 3.7% 47368482 NA +61108 chr4 + 190214555 84324434 84324433 84325337 904 CCCCAGGCCCCTTTAATCCTCTTCTCATTTCTAATGCTGAAGGCCCTTTGAGAAAGGGGGAGGGGAGGAAAACAAAAGGTTAATTTTCTCCAGCCTGCCCAGGCCAACTTAATGTAACAGAAGGCAGCAAATTGTATTGATTTAGTGACATGCAACTGTCCAGAAAGAGCTATTTATACATTATTCAGGACAAACACTGTCATAATGGACAAACAGCAGCAGCATCTGGGATGTTAATGTCTACAAATAAGATTATTCTTTGAAAGGATTAGGATGAAGCATTTTGTGTAATTAGATTTCTCCGTTTCAGGAATGAATTGCCTTTTAGCAGTAAAAGCTGTCACTGAGGGAGCCATTAGCTCCTTATAACTGAATTAAATGCATAATTAGTGACATGATCACATTAGGATTTGTTTCATTTTTAACTAATCGGGGTGGGGGGAGGGGCCGAGGGAGAGTTGGGGAGCAGAGGCGGTGCCATTTCCAGGTCACTGCGGCCTTCCTCAGCTGGGATAGGCCTCAGCTGGCGTGCTGAAGTTGGTAAAAGTCAGGCGTGTGTGAATCAGAGCCCGGGCCTCGCCACGGCGACGGCCAGGCTATTCATCACTGGGTGGTGGGTGACAGTGACTGATGGGCTAGGCCCGGGCCTGGCACTTCACCAGTGCAAGAATCATACGAGCCAGGGAGCAGAAAGACAGCTGGAGCGCTGTGTCAAGTGGTGGAGAGACCAGAGCTATTAATAATGTGTGCCACATGATCTCAGCCTCAAGAAAACAATGATTTAGACATTGGTGAGAATAAAGATTTTACATTTAGTCCGGGGGTGACTCTTCTCCTTGGCACTTGTAGAATAAATCGCTATGCAATCAGCATGTATGAAAATCAAGCAGTGCATATATTAGAG chr4 + 94230402 48209162 48209161 48210014 48209162 48209161 48210014 853 CCCATAGGCCCTCCAACCCT-TTCTTGTTTCTAATTTCAAAGGCCCTTTT------------GAGTGGGAAACAAAAGGTTAATTTTCTCCAGCTTGCCCAGGCTGACTTAATGTAACAGAAGGCAGCAAATTGTATTGATTTAGTGACATGCAACTGTCCAGAAAGAGCTATTTATACATTATTCAGGACAAACACTGTCATAATGGACAAACAGCAGCAGCATCTGGGATGTTAATGTCTACAAATAAGATTATTCTTTGAAAGGATTAGGACGAAGCATTTTGTGTAATTAGATTTCTCGGTTTCAGGAATGAATTGCCTTTTAGCAGTGAAAGCTGTCACTGAGGGAGCCATTAGCTCCTCATAACTGAATTAAATGCATAATTAGTGACATGATCGCATTAGGATTTGTTTCATTTTTAACTAATCCGGGGTGCGGGA------------------------------GGTGCTCTTTCCAGGTCGCCGCAGCCCACCTCGGCAGGCCCA-GCCTCAGCTGGCGGGCCGGAGCTGGTGAAAGTCAGGCGCGTGTGAACGGGAGCT--GGGCCCGCCACGGCGCTTGCGGGGCTATTCATCACCGGGTGCCGCCTGACAGTGACTGATGGGCTCGGCCCGAGCCTGGCACTTCACCAGTGCAAGAATCATACGAGCCAGGGAGCAGAATGACAGCTGGAGCGCCGTGTCAAGTGGTGTAGAGACCAGAGCTATTAATAATCTCTGCCACATGATCTGCGCCGCCAGAAAACAATGATTTAGACATTGGTTGGAATAAAGATTTCACATTTAGTATGGAGG-GACCAGTCTC----GCACTGGAGGGATAAATCGCTATTCAATCAGCATGTATGAAAATAAGGCAATGAATACATTAGGG ...xx:.x....::..:...-....::........x:::..........x------------.:.x..:.........................:.........::........................................................................................................................................................................:...........................x.............................:...............................:...................................:..............................x...xx.x....------------------------------.....:x..........:.:..:...:x....:..x..xx:.-.............x..:.:..:....:...........:.......:x:....:--..x.:..........x:x..x:.............:.....x:.xx...................x......:...............................................x..............:.............x......................x.x.............xx...x.x.........................x:............:.........x:..:..-...:xx....----.....x.x:.:............x....................x.:...:..x...:.....:. 20M1D29M12D381M30D42M1D54M2D252M1D10M4D65M 759/853 89.0% 853/94230402 0.0% 51/853 6.0% 36115272 NA +3375 chr4 + 190214555 84360162 84360161 84360262 101 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTGGAACCCAGGAGGCAGAGGTTGCAGTGAACCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:--.::.x....:.:...........::........x.xx.x...x..:.x........:..x:xx:..:..:..------..x..x...... 9M2D72M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 8326965 NA +48928 chr4 + 190214555 84362710 84362709 84363418 709 GTTGCTTTATTTCTT--------CAGAATTTAAGAAACCACTCTAATGAGCCCAGTCCTCC-CCAATAAAACCAGTCGCCTCTTATATCCTGGCTGCTCCATATTAAACTGGCACAGAAGCACTTAACCTGCTAGATCGCCTTTCTCCAGACACCTGCCCAAGCAGCAGACTAAACAAACAGGGATTCTCCACTGCGCAAAAGTTGGCTTCTTTCACTAGGTCTCCCATCTGTTAAAAAGCCATTGTCTGAGAAAGTGTTCAGCTAGCTGGAGAGCGAGAGTGATTGCATACTGAACTGCCCCCTTTTCCCCATAAAAAGTCCTCTTTAGCATTTTCTTTTCTCCCCGGTTTTCATTGCCTGATTTATTCATTGGTTTCACCTCTTCTCCCCTCCCCCT-TGGTTCGGGAGGAGAGCCTCCTTGTCTTCGGTTTCTGAGGGGTCATGTCTTTTCAGTCACTAGGACAATACCCGCTGCTGGCATCTGCTTCCAGATCCAATCAGCCATATTGTGAACACATCCTGCCAGAGAATTGTTCCTCCTTTTGCTCGGCTTTGTTGCCAATTTCATGCCATGTATTGCTCCATGTTTTGTGCTTCATGAAGCTGTCACAGGCATAAAAGTGGTCTGACCAGGGTCGTAGTAAAAGGGGTGGGAATGAAACATCCACCAAAATGTTGAGCAGGCCACCCACAGTCCACACACACACACACACACA chr4 + 94230402 48216224 48216223 48216938 48216224 48216223 48216938 715 GTTGCTTTTTTCCTCTCCATCCCCAGGGCTTCACACACAAGTCTAACAAGATCAGTGCCCTGCCAGTGAAACCAGTCCTCCTCCATACGCTGGCTCGCCTGTGTTAAAC-GCCTCTGAGACACTTAACCTGCTGGATCGCCTTTCTGCAGACACCTGCCCGAGCTGCAGACTAAACAAACAGGGATTCTCAACCGCACACAACTTGGCCCCTTTCAGCAGGGCTCCCATCTGTTAAAAAGCCATTGTCTGAGAAAGTGTTCAGCTAGCTGGGGAGGTAGAGCTATTGCACATTGAGCTGCCC--GGCTCCCCATAAAA-GTCCTTTTTAGCATTTTCTTTTCTCCCCTGTTTCCATCGCCTGATTTATTCATTGGTTTCACCTCCTCTCCCCTCCCCCTGTGGTTCATAAGGAGGGCCTCGTTGTCTTCTGTACCTCGGGGGTCATGTCTTTTCAGTCACCAGGACAATACCCGCTGCTGGCATCTGCTTCCAGATCCAATCAGCCATACTGTGATCACATCCTGCCAGAGAATTGTTCCTTCTTTTGCTCGGCTTTGTTGCCAATTTCATGCCATGTATTGCTCCATGTTTTGTGCTTCATGAAGCTGTCACTGGCATAAAAGTGGCCTGACCAGGGTCGTAGTAAAAGGGGTGGGAATGAAACATCCACCAAAATGTTGAGCGGGCCACCCACTGGCCGCATGCACCCCCATGCACA ........x..:..:--------...:::..x.x.x..x.x.....::..x:....x.:.:-...:.:.........x:.::::...:x......xx:.::.:......-.x.x.x..::.............:............x.............:...x.........................x..:..:..x..x.....::......x:...x.................................................:...xx....:x......:.:...:......--xx:...........-.....:......................x....:...:...........................:..............-......:x:.....:.....x........x..x:..x:......................:................................................:.....x.........................:.......................................................................x.............:........................................................:..........x.x..:..::...x.x..::.... 15M8I38M1I47M1D192M2D14M1D80M1I319M 610/705 86.5% 715/94230402 0.0% 14/705 2.0% 36146486 NA +44173 chr4 + 190214555 84366147 84366146 84366762 616 TAGTTTTTATTTATGTTTAATAAGGACACTAAGC---CAGCAAGACTCGAAAGGGGGCCAGAGCCAG--CTTTGTGCTCTGTGTGAGCGTGTATGTGTGTGTTAAACAATTTCATGGACATCTGTCATGCACAGTTAACTTTGCATTGCTGCATTTTAAGTGGTGGGCCCAGGCTTGGCTGGCAGTGATAAAGTAGCTGGCAGTTTTCAAAAAGCCACAGGATAACTGAGCATGAATCATAAAACACACTACTGTGTAGCAATATCCAAGTTCATTCAATGCAATGAAACCATGCAGAGGCCCTTTATCCCCAGCTAATTATGTGGAAACGTCTAAGACAATAAAGCATCTGGTGGTCTTTCTTCCCCATTTCAATTTTTCTCAATATTGTGACAGGGGAAAGTATTGTGCCTTTCCCAGGGTAGTTGCAGTGAAGAGGAGTAAAAGCAAGGGTCAGGGAAGAGCAAATAGATGAATTTATAACTTTCTTTTTATTTATTCCTTCCCCATTGTTTCTCTGGA-AGTCTTCCTGCAGGGCTGTATTTTGGGATCACTATTCTCATTGCACCCTGCTTGAATCCCCTTTTCTCCCCCTTTAAAAAAATACCACCCAAACTGCCA chr4 + 94230402 48218033 48218032 48218641 48218033 48218032 48218641 609 TGGGTTTTATTTCTATTTAGTCGCGACATTGACCTCGCAGCGAGA----GAGAGGGGCTGGAGACAGAGCTGTGTGTGTGGGGTGTGCATGCGTGCGTGTGTTAAACAATTTCATGGACATCTGTCATGCACAGTTAACTTTGCATTGCTGCATTTTAAGTTGCAGGCCCAGGCTTGGCCGTCAGTGATAAAGTAGCTGGCAGTTTTCAAAAAGCCACTGGATAACAGAGCATGAATCATAAAACACACTACTGTGTAGCAATATCCAAGTTCATTCAGCGCAATGAAACCATGCAGAGGACCTTTATTCCCGGCTAATTATGTGGAAACGCCTAAGACAATAAAGCATCTGGTGGTCTTTCTTCCCCATTTCAATTTTTCTCAATATTGTGACAGGGGAAGGCATTGTGCCTTTCCCAGGGTAGTTGCTGTGAAGAGGAGTAAAAGCAAGGGTCAGGGAAGAGCAAATAGATGAATTTATAACTTTCTTTTTATTTATTCCTTTCCCATTGTTTCTCTGGAGACTCTTCCTTTAGGGTCGTATTTCCAAACCACTATTCTCACTACGCTCTGCCTGAATACTCTTTTTTTTTT---------AATACCACCCAAACTGCCA .:.x........x.:....:.x:x....:.:.x.---....:...----:.::.....::...x...--..x....:x:x.x...x..:..::..:.................................................................x.::..............:.x....................................x.......x...................................................::....................x.......:...:..................:.....................................................................:.:.........................x..........................................................................:.................-.x.......x:....::......:x::.:...........:.:.:.:....:.....x.:.....:.::::---------................... 34M3I8M4D18M2I453M1I71M9D19M 535/603 88.7% 609/94230402 0.0% 19/603 3.2% 36148114 NA +41144 chr4 + 190214555 84378952 84378951 84379491 540 GGCAAGTCTTTTATCAGATATATCTCCTTTCCTTTTCGAGTGCCTATCATATCACACAAACTGCTCCTGAAGAGCCCTCCATTTACCCTTTCCCCTAATTAAATGTGCACTTCATTAATGTAAATTGGGGGTTTAATGCTCTTGTTGAAATTCTGAAGAAAGTGCTATGGCCTTGCGAAATGCTTAAGCATCATTGCAAATTAGATTAGGGACCAAGAAAGGCAGTAAAATTAGAATGATAATGGCTGATGTGGCTTCCTGACAGGCATGACTATTCAGGGATCAATGGAATGGAGAACAGTTT-CCCGAGCCCAAAGTGAAAGGCAGGGACAAACGTCAGCCTACAGATGTGGCTTTTGGAAGCACTTTCAATTAGTTTAATTTGGTAAATGGTGGGGATTTAGAGGCTCTCAGCCAGTCATACAAGACAAGAATACATTGAAATGTTTTTC-ACTTTTTAACATAAAATAGGATTGGCTTTAGATTTGCATTTCTCGAACAAGAAGATGGAGTGGGGTGGGAGGGGATGGGGGTGCAGGG chr4 + 94230402 48225213 48225212 48225742 48225213 48225212 48225742 530 GGAGAGTCTTTTATCAGGTGCATCTCCGTT---TTTCGAGTGCCTATCGTATCACGCAAACTGCTCTTGAAGAGCCCTCCATTTACCCTCTCCCCTAATTAAATGTGCACTTCATTAATGTAAATTGGGGGTTTAATGCTCTTGTTGAAATTCTGAAGAAAGTGCTATGGCCTCGCGAAATGCTTAAGCATCATTGCAAATTAGATTAGGGACCAAGAAAGGCAGTAAAATTAGAATGATAATGGTTGATGTGGCTTCCTGACAGGCGTGACTATTCAGGGATCAATGGGATGGAGAACAGTTTCCCCCAGCCGAAAGCGAAAGGCAGGGACAGACGTCAGCCTACAGATGTGGCTTTTGGAAGCTCTTTCAATTAGTTTAATTTGGTAAATGGTGGGGATTTAGAGGCTCTTAGCCAGTCACACAAGACAAGAATACATTGAAATGTTTCTCGGCTTTTTAACATAAAATAGGATCGGCCGC--ATTTGCATTTCTT-------AACGTCGCTGGGGGTGGGGGAGGAGGGCTGTGCGTGG ..x:.............:.::......x..---...............:......:..........:......................:...................................................................................:.......................................................................:.....................:.....................:..............-...x....x....:..............:...............................x..............................................:.........:...........................:..-:.....................:...:x:--............:-------..x:.x.xxx........:.:...x..xx....:x.. 30M3D271M1I148M1I29M2D13M7D37M 487/528 92.2% 530/94230402 0.0% 14/528 2.7% 36153739 NA +28366 chr4 + 190214555 84384790 84384789 84385445 656 GAATGATTAGGTGTGGCCCTATAGCTCACTCTCACTTATTCAGCTGTTAAAGCAGCTTAAACCCTCATAAGAACATTAACATTTGGGTGCCAATAACAGATTGACCTTTATTCATAAAGTGCAAATAGTTGGAAGTTGAACAGATTGGTTGCCAGCGATTGCCTTTTATGTGCAGTTTA-AGGCTTTGATTTCTCTCCCCTTTCTTCCTTTAATCTGACATCACTGGGTTGAATAGGGTTTGCACTCTAAGTAAACAAGGCCAGGGGAGGCCTTTGCTTTT---GTAGCACAGTTTGCTTGGAAAGAGAAGGAGACAGGAG----GGTGACATTAAAA--GATTTGCCTTTGGAATTAAACAATTTAAGAATGGATTGGAAACCCCAAAACTGAGTGGAGCTGTTGGTAG-GCTCTGAACTGAACTCACACAAGAGCCTTTTGCATATGGGACTATTTATCCACAATCATTCATGTAGATGGTGAATGAGAATGTAAGGATTTATATTAACTCTCTTGAAAGTTTACTCTATGTCATACACAAAAGGGAAACTCAGAAA---CCCACAGAGCCTATGGATTTGAAATGAGACCACAGTGCACTGCTTTGTTACCCTCTTCTAGCCAGCTGTGAGCATTTTGATGCTTAAGATTGCAGAGGGTGGCTGAAG chr4 + 94230402 48226487 48226486 48227145 48226487 48226486 48227145 659 GGACAGTGAGGTGTGGCCCTGTGCATCCTTCTCACTTATTCAGCTGTTAAAGCAGCTTAAACCCTTATAAGAACATTAACATTTGGGTGCCAATACCAGCTTGACCTTTATTCATAAAGTGCAAAGAGTTGGAAGTAGAACAGATTGGTTGCCAGCGATTGCCTTTTATGTGCAGTTTAGAGGCTTTGATTTCTCTCCCCTTTCTTCCTTTAATCTGACATCACTGCCTTGAATA-TGTTTGTGCTCTAAGTAAACAGGGCCAGCACAGGCCTCCCTTTTTTGAAGAGCTCTGTGTGTGT-GAGAGAGAGGGAGGTGGGGGCCGAGGTGCCTCAAAAAACAGTTTGCCTTTCGAATCAAGCAGCTTAAGAATAGACAGGGGATACCAGGCCTGAATGGAGCTGTGCACAGCTCTCCAAACTGAGTTT-CACGTGAGC--TTGGTCGGCCCCGCTATTAATGCCCAGTGCCCTGTGTATGTAGAGAATGAGAATGCGAGGATTTGCATCAACTCTCCTGACTTCTTCCTCCATTACATCCACAGAGGAGAAACTGAGGAGAGCACTACAAAAGCTAGGCATCTGAAATAGCTTCACAA-----TTCCTTGTCCCCAGCCACTTGACAGCTCT-AGCGCTCAGGTAGAAGAGATTCCTGTGGCTAGCCATAG .:.:::.x............:.:xx..x:....................................:.............................x...x.........................x..........x..........................................-..............................................xx.......-x.....::.............:......x:x......::x:....---:x...x.x..x..:x.-..:.....:....:::..:.----....x.x:x....--::.........x....:..:..::........:..:x..::.:x...::x....:.........xx::..-x...::......::.:-...:x....--..x.:xx::xxx:.....x..x.x..:.xx::::....x:.:.x...........::.......::..:.......:...xxx:..x...:..xx...x....:.:.:......x..:.:---x.:...:.:x...x.x..:......::xx:....:-----.x.:....:x..xx.:x..x.x.....x.-...::.:x.:.:xxx:.....x.x.x..x.:..::x.. 179M1I55M1D45M3I16M1D20M4I13M2I70M1I16M1D9M2D120M3I35M5D29M1D38M 481/645 74.6% 659/94230402 0.0% 25/645 3.9% 36158303 NA +4193 chr4 + 190214555 84390683 84390682 84390828 146 CCTGATTGGATAAAGCTTTTAAACGGTCATGAATTAGCTGAGCATGGTGGCTCACGCCTATAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAATCCAGAAGTTTGAGACCAGCCTGGACAACATTGTGGGAGGCA chr4 + 94230402 76033157 76033156 76033293 76033157 76033156 76033293 137 CCTGGTTTGGGAAAGTATGTAA--TGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG-----CTGTAGAACATGATGCCAAGCA ....:..x.:x....:x.x...--x........xx:::x:x:..::....:x....--.:....:.:.........::........x.xx.x.:.x........:.......:..x:.:-----...x.x.....x:..xx.:... 22M2D32M2D61M5D22M 93/137 67.9% 137/94230402 0.0% 9/137 6.6% 8357526 NA +28851 chr4 + 190214555 84393223 84393222 84393793 571 TCAGCAAACTCCTTACTAAAAATATTAATTCCACTAAAAGCATCGAAAAGACCTTTTTTTCCTTAGAAAGAAAAAAAAATACAGCTGCATAGCAAAATGGAAGGCTTGAATGAACATTTCAAGTCCTACCTGTCACAAGCCATTAGTCGAATTGCCTAAAGAAATCCCTTGACAAGTATAAGTGCTGTTTTTATGTTAGAGCGCTTCATAATGTTGCCCACAAGAAGAAATTTCTCCACAAAAGCTTCTTCTGTTTAATAAAGTGATTTGTTCCAGTAACAGTGATAATAAAATTGCTGAATTGAAATAGGATTGTTCAATGAAGACCTGAATCCAATTTGCTGGACTAGTATGATTACACTTTTATCTCTGTGTTTACTCATTTGTAGAATTGCTACCAGTCTTTTGATACGCAATTAATAGGATTAATGGTTTTCAGGAC-CAGAAGGCAGTAACAGGGAAGAGAACCCATTTTTATGTGGCACAGTATCTGTGTGTTGACCT--ATTAAGGCCTGTGCACCTTGTCAGCTGTGCTACAGAACGATAGGTTGATTGCCTTTCCTTATCCTTT chr4 + 94230402 48229185 48229184 48229731 48229185 48229184 48229731 547 TCAACCAAGCCCTGACACAAAGCATTCATTTCGCTAAAAGTGTG---------TTTTTGTTCT---------GACAAAATATAACTCTATAGCAGAG-GGAAGGCTTGAATGAACATTTTGAGTCTTACCCGTCACAAGCCATTAGCTGAATTGCTTAAAGAAATCCCCTGACAAGTGTAATTGCTGGTTTTGTGTTACTGAGCTTCATGATATTGCCCACAAGAAGAAATTCTTTTACAAAAGCCCCTTCTGTTTAATAAAGTAATTTGTTCCAGTAACAGTGATAATAAAATTGCTGAAATGAAACAGGATTGTTCAATGAGGACCTGAATCCAATTTGCTGTGCTAGTACGATTACACTTTTATCTGTGTGTTTACTCATTTGTAGAATTGCTACCAGACTTTTTATATGTAATTAATAGGATTAATGGTTCCCCTGACGGGGAAGGCAGCACCCAGGAGTACAGCACCTTATTTTGCATGCCGGTGAC---ATGTCACCCTGAAGTAAAG---GGTCGCCTTA--GGGTGCAATGCAGACTAACAGGCTGATTTCCTAACCAttttcttt ...:.x..x:...x..xx...::...x...:.:.......::.x---------.....x.:..---------:.x......:.:..x:......:.:-.....................::....:....:...............::.......:............:........:...x.....x....:.....xx.x.......:..:...................::.::........::.................:....................................x.....:...............:....................x:......:................x...............................x.....x...:.:....................::.xx...-x:........:.x.x:...:x.x.:.x.x..x..x..::xxx.:..:x.---:...::x...--.x...:.---.xx.:....:--:.x..::x.:....x::.:...:.....x...xx..x.x.:.... 44M9D10M9D25M1D344M1I49M3D10M2I7M3D10M2D45M 431/544 79.2% 547/94230402 0.0% 30/544 5.5% 36164038 NA +3283 chr4 + 190214555 84405503 84405502 84405581 79 GTGGTGCACACCTGTAGTCCCAGCTACTCAGCTTGATGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........:::xxx.x....x.xx.x.:.x.......:.....:..:.:x:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 8372302 NA +3453 chr4 + 190214555 84407365 84407364 84407405 41 CCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...::...................x................ 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 9159317 NA +3567 chr4 + 190214555 84407368 84407367 84407407 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 9159319 NA +3102 chr4 + 190214555 84407370 84407369 84407405 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 71806066 NA +3353 chr4 + 190214555 84407370 84407369 84407409 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 9159321 NA +3139 chr4 + 190214555 84407372 84407371 84407411 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 9159323 NA +3316 chr4 + 190214555 84407372 84407371 84407407 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 71806068 NA +3102 chr4 + 190214555 84407374 84407373 84407409 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 71806070 NA +38173 chr4 + 190214555 84407786 84407785 84408300 515 CTGGCAGAAATGGATGGTCCACACAAGGAAGGATCAATTGTAAAAAGTGGAATTAGTCATTCTAAATCATGCAGCTGTGGTCGAAGGGAGCTCTTCTAAAAATCATTAAACAATCATGTATTCCTATTGATTTATTCAAAATACCTTGAGGGAAAGCAGATTAAACACAAGGTAAAAGTAAGCTAATGCAGATTAAATGGATGAAGGATGGGCCGAGAGTTCCCTAGGTAGTTTTTGTACTAATGAGAGGAAAATTATATGTACACTATTACCAGGATAAAAGGGTCTATTAGAGGTCTTTTGCTTGACATATTTATGTATTTCAAATACTAAGTAGCATAGTGAATTAGGTTTACTCTGGACATTTGTTATTTTTATTGCATCTCCAAAGTGATAAACAGAGTTCTCTGTTGA-GGCAGCATGCTGCCTCACTCCAGGA-----AGCCCTGCCTGAATAGACAAATCCTGATGCCAGAGCTGTTCCCTGGATGTCATTTATTAACAAACCCAGTGCAGTT chr4 + 94230402 48232788 48232787 48233306 48232788 48232787 48233306 519 CCGGCAGGAATGGATGAGCCGCACGCAGCGGAATCAATTGTAAAAAGTGGAATTAGTCATTCTAAATCATGCAGCTGTGGTCGAAGGGAGCTCTCCTAAAAATCATTAAACAATCATGTATTCCTATTGATTTATTCAAAATACCTTGAGGGAAAGCAGATTAAACACAAGGTAAAAGTAAACTAATGCAGATTAAATGGATGAAGGATGGGCCGATAGTTCCCTAGGTAGTTTTTGTACTAATGAGAGGAAAATTATATGTACACTATTACCAGGATAAAAGGGTCTATTAGAGGTCTTTTGCCTGACATATTTATGTATTTCAAATACTAAGTAGCACAGTGAATTAGGTTTACCCTGGACATTTGTTATTTTTATTGCATCTCC-AAGTGATAAACAGGGTTTTCTGTTGAGGGCAGCATGCTGCTTTGCT-CAGAAGACACAACCCTATCTGCATTGCAAAACGCTGAGATGACTGTCATGTTTCAGATGCCATTTATTAGCAATACGACTGCAGCT .:.....:........:x..:...:x:.x:.:..............................................................:......................................................................................:..................................x.......................................................................................:..................................:................:..............................-.............:...:........-.............:.::..-...:.-----.:....::...x..x.xx...:x....x::x.xx.:::.x:::::....:.........:...xx.x.x.....:. 387M1D26M1I19M1D5M5I76M 459/513 89.5% 519/94230402 0.0% 8/513 1.6% 36174998 NA +6220 chr4 + 190214555 84410764 84410763 84410919 156 GTAGGTCCAGGACAGGAAAAGTCTTTCTGCTTACTGAAAATGAGTTCTATTCACAACTGTGCTTTTCCAGAGTTTGGCTGTTCCCATTTTCTTGGACGCTGTTAGAGTTATAAAATAAACACTTCCAAGATTGTTTTCTTAAA-AGTCAGTCCAACA chr4 + 94230402 48235674 48235673 48235822 48235674 48235673 48235822 149 GTAGGTCC-GTACAGG-------TTTCAGCCGGCAGAGAATCAGCCCCATTCACCACTGTTCCCCTTCAGAGCCCTACTGTTCACCTTCTCCTGGAAGATCGCAGGGTTGCAGAATAAACTCTTTCAAAATTGTTTTCCTAAAGAGTTAGTCCAACA ........-.x.....-------....x..:x:.x..:...x..::.:......x.....x.:::.:.....:::x:......x.x..:..:....x.x.xx:..:...::.:.......x...:...:.........:....-...:......... 8M1D7M7D120M1I13M 108/148 73.0% 149/94230402 0.0% 9/148 6.1% 36175090 NA +40232 chr4 + 190214555 84418207 84418206 84419175 969 CAGGCTGAAGAG------TGGGGCAGGGCAGCTCATGCTGTTTGCCAGAGGTCTTAAGGGGATCTTCTATTTCATTCCCTAGTAATGCCCTTTTTGTTGACAAAAGTAAATTGATGATAGTCAAGAGGGAAGCATTTGGTGGAAAAAATTCTGTTGACCCTTCTCAGATTGAATTTGACCACAGAACAGGATACCAGCAGTTGCAGAAATGATAGATTATTGTAATGACTGCCAGAATGGCCTTTTGGCATGTTTAAATGGCAATAAATTTCACCAGGAAGAAGGCAATTTTACTACTTTAGAGCAGTAAGGAAACACGGTGTTTAAGGTGTAAATAAATCGTGGGTCATTAACAGCAAGCGTATTCTGTCCATGGTGCAATTCTCAATCAGTGGCTATTCATATTTAATTTAA-TTATGTGGATTTACTTAGCC------AATTATGCTTTTTTGTTCCAGGTCACAGACTTCTCAGGCT-----------------GACAATTTTGCTCTCTTCCTGTCTCCCTTAT-------------GTCTATAAACACAGCCCTAGTTTCTCCCTCACTTTTCCTTCCA--------------------------------------------------------------------CAGGTACATAAATACCATCGGGGAAGTTCAATGATACTAGCTCACTGAATAGCCTG---CTGAG-ATTATTAAATTAGAGACT------------GATG------------------------TGCTATGTGGTCTTTTT-------------CTTGGCTCCAAAATCCCCTCTGTCCCTCGCTCATTAATCTGGTTCAGTCCTTCACTGAACTCTGCCATT--AAAGGAGGAGGCGG--GAGAAAGAGGTGTG--CAATGAAGTTTGACATTTTCTCAAAAATGATTGTATTAAAACCCACTTACATTTATAGCTCCATCTCATTTGAGAATGTTAATCAGTTGCAATTTCATCAAGGTAAAGGTATTGGGATCTAATCAAGTCAAAGACTTGCTCACATTGGTATGTATCGCACTTCTGAAGCATCACTTCAAAAGGTCATTTTTAAATACAG-TAAAGCTGATA-ATTTA--AAAAGTTCATTCATA chr4 + 94230402 48241988 48241987 48243125 48241988 48241987 48243125 1138 CGGGCAGAAAAGATGTGATACGTCAGAGAAGCTCTTGCTGTTTGCCAGAGGTCTTAAGGGGATCTTCTATTTCATTCGGTAGTAATGCCCTTTTTGTTGACAAAAGTAAATTGATGACAGGCAGGAGGGAAGCATTTGGTGGAAAAA-TTCTGTTGACCCTTCTCAGATTGAATTTGACCACAGAACAGGATACCAGCAGTTGCAGAAATGATAGATTATTGTAATGACCGGCAGAATGGCCTTTTGGCATGTTTAAATGGCAATAAATTTCACTAGGAAGAGGGCAATTTAACTACTTTAGGGCAGTGAGGATACTCTTTGTTTGAGGTGTAAATAAATTGCGGTTCATTAACAGTGCACATATTACATTCACGGTGCAACTCTAAAGCACGGGATGttaatatttaatttaatttaaGCAGATACGTTTCACCTGTTTGGGTTTTTTTTTTTTTTCCCCCATC-CAGGCTTCCTCAACTTCCAGTGGCAGTTTCGAGGCACTTTTAACCTCCTTAGGTCTCTTCTATCCCAAATAAACTGGTGTGCAAACAAAAAGCAGTGCTTAGGCTCATATTTCCAGCCAGCATGAGCAGCTGGGACTGTTGGTACTGCTTTGTGCCAGCAAAGCCTGTAGCATTCAGTGTGTGGTTTTATGTACAATGGTGTAGTCAGGAGAACTACGTGAAGCCAAAGCCTTG--TCGGCTGCACCCAAGCAAAATCAAAGGGAAGGCTCGGAGTGAAGCAGATGGCAGCAGACCCGCAGCAATATCGCTGCTGGGAGAATTTATTTCTCATCTTTCACCTTGACTCCGAAATTCCCTCTGTCCCTTGCTCGTTATTTTGGCACAGTTCCTTGCTGAACTCTGCTGTTACAGAGGAGAAGGAGGGTGGGGAGGAGATGTACCCAATGAAGTTTGACATTTCCTCAAAAA-GATTGTATTAAAATCCACTTACATTTAGAGCGTGCGCTCATTTTGGAATGCTAATAAGGCGTCGTTTCATCAAGGTAAAGGGAGCAAAATCTAATCAAGCCCAAGACCAGCTTGCCTTGCTGTTGACTGTGTTCCTGAAACATCACTTTAGAAGGTTGCTTTTAGACGTAGCTGAAAGTGACAGACTTAACAAAAGCTTATAAATA .:...x...:..------.:x.x...:.x.....x..........................................xx......................................:..x..:.......................-.................................................................................:.x..........................................:.......:........x..........:.....:....x..x.xx.....:..............:.:..x..........::x:.:....x::.:..:.......:...x..x..xx..x.:..x.............-...x.::...x:::..x:..------::..x.x:......x.:..xx:..-...:....::x::..-----------------.:..x....:x:...:.:xx.....:::...-------------..x.::.....x.:xx.x:xx:.:xxx....:x.....xx...--------------------------------------------------------------------:.x.....xx::.::x:..:..::.::.xx:...x:.:.:xx.x:..--.x.x...---.::..-.xx..:...xx::..:..------------....------------------------....:x.x.:x:..x..-------------....:....:....:............:....:...x.:...:x....:.:.::...........::..--.:.....:...x..--.:.:.:...:...:--..................:........-.............:.............x...x:xxx.......x:.....:....x..x:.:x:.................x.x::::...........:.x.....:x...::.x...x.:.xx.::.:::.:.....:........:.:.....:::.....:.:::..-.:..:x...:.-.:...--.....:.:..xx... 12M6I129M1D266M1I20M6I24M1D15M17I31M13I43M68I47M2D7M3I5M1I18M12I4M24I17M13I69M2I14M2I14M2I27M1D171M1I11M1I5M2I15M 733/964 76.0% 1138/94230402 0.0% 179/964 18.6% 36176219 NA +6920 chr4 + 190214555 84428564 84428563 84428821 258 CTTAAACTTATGCTTTATTCATTTATTATTCATATCAATAATTATTTTTGTATTCACTATTTTTATTTCTATGTATTGTTTATTTATAGCT------CACTCATCATGTAATATTAACCAGGCAATAACACAGGCCCTGATGGAAAGGTGGACTCCTTTTTCATTTACTTTTATAAATATTTCAAACTAGTAGCCAAAATGCACAATTCCTACATTTTTATATAAGCTCTTTGATGTGCTAGGTTATGAAGTACTACAAATTCT chr4 + 94230402 48244905 48244904 48245140 48244905 48244904 48245140 236 CTCAAGCCtat-ttttatt-atttattatttGTA---GTGATTATTT--ATATTCACTATC---ATTTATGCTTCTTGTTTATTTATGGTTATAACACACTCATCATACAATATTAACCAACCTATAACACTGTCATTGATGG----------CTGTTTTTCATTATCCTTCATGAATATTTCAGTGTAGTCCTC--------CCGGTTCTTCTATTTTAGAAAAGCATTCAGAAGTGCAGTGTTGTGAAGTCCTATGAATACT ..:..:.:...-:......-..........::..---:.:.......--:..........:---....x.::x.x............:.:.------..........::...........:x.x.......x.x.x:......----------::x.........xx.:..:..:.........:xx....xx:.--------.x:x.:..x.xx.....x.x....x:.:x..x....x:x...:......x...::...x.. 11M1D7M1D14M3D10M2D12M3D27M6I46M10D42M8D61M 168/230 73.0% 236/94230402 0.0% 34/230 14.8% 36183659 NA +3030 chr4 + 190214555 84428973 84428972 84429011 39 TATATATATATATATATATACATACACAGACACACACAT chr4 + 94230402 4409084 4409083 4409122 4409084 4409083 4409122 39 TACATATATATATATATACACACACAGAGACACACACAT ..:...............:...:...x............ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 80019889 NA +3090 chr4 + 190214555 84428973 84428972 84429013 41 TATATATATATATATATATACATACACAGACACACACATAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.................:.......x.......:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 80019891 NA +3048 chr4 + 190214555 84428988 84428987 84429067 80 ATATACATACACAGACACACACATATATATACACATATGTGTATATATGTATATGTGTATATATGTGTGTGTATATATAT chr4 + 94230402 22600182 22600181 22600261 22600182 22600181 22600261 80 ACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCAT .:.x.x..x..x::.x..........x:.:.::..x.::::.::...::x.x..:.......x.............::.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 61828806 NA +3293 chr4 + 190214555 84429000 84428999 84429079 80 AGACACACACATATATATACACATATGTGTATATATGTATATGTGTATATATGTGTGTGTATATATATTCTTCTGTAATA chr4 + 94230402 22600196 22600195 22600275 22600196 22600195 22600275 80 AGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATA .........:..x:.:..:..x.:.::..:...:.x:x......:...x.:.......:...::..::x.x.xx..:... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 61828804 NA +94350 chr4 + 190214555 84433521 84433520 84434877 1357 CCTGCGGGGA---AGAATGAAAAGAAGGGAAACTAAGAGAGAAAAAGAACAGCTCCTCCATCATCGGTGCTGCCTTCTTCATCTTCGTCTC-------TTTTTTTTTTCAGATGGCACACTGACAGAAGATTAATTCAAGTCAGCTGCTGAAAATAATTATTGCATTATGGGAGCAGTAATCATTATTTAGAACATGATTAAATATGTCTGCACCTATTGACTCTGCCTATGATTTATGTATTTGTTTAGTCAATAGTCTAATGTAAATGATGTAATTAATTATAGATGGTGGTGTCAGGTCATTGGTGAAAACAATCTGAGGAGAACAAGGGCTCTGTTTTTTTCATGACAGATGCAGGGGG---GTGGG------GGGCTGAGTTGAGGGAATTCCAGGGGAACTTTTTCACGTGTGAATGGCGGCTGGGATCTCAATTTGCATGTTGTCTTTCTCTTGTTCAGCCTTCGTTTAGAAATTGAAATAACTTGTTAAGCAAAGGGGAAGGGAGCACATGGTTGCCAGGAGGACACCTGGGACTTGGGCGGGTGAGTAGGTAAAGAACCAGCTGCTCCCTAACACAGGGGAGCGTGGCACCATCATTTACCGCTTCATAAAATTAAATGTTTTCCAAATTAAATCAGTAGACAGTGTGCAGGAGG-CCTACTATCTCTAATAACAATTTTTCAATCAATATGAGGGGCCTTGCCAATATGAAATCTGAGCTGAGGAAGTTAGGATGGGCTGGGGAGGGAGTGTCAGAGGATGGCACAGGCGAGGAGGTGGAAACAGGGTTTGAGTACCGAAGCTTTCAATCAAACCAAAGGTTTAAAAAATATAGATATATATTCATGGTGGATTCGCCACCACTGTGAGTCTATTCCCTGTAGATTTTTCTCTTAACTGATAATTCGGTCAGTCACATTCCTCAGAGGGGGGTCACAGGTCACCCCAGCCCCTGTCAGGCCTCAGAGAAACCATTTCCATTTTAATGCCACAGCTATAATCTATCAAAGATGTGATGTACAAGATACAATGAATTTAAGTGGTCTTCATATATCACTGAGCTTTCATGCCTTCACCTGGGTAATAGTCTGAATTACTCTCCCTACCTCACAATCTGTCACCCCCAGTAAAATAACTGCCATGCCGGTGTTAATGACAGATTTGTCCAAATTGGGGCCACAGTAGCCAAAGTCATTCTACATCATAAACTTTAGCATTTAGTGCTTAGCCTGGAAAGGGCCCATAGCTTAAAATACTTCTGTAAATAATTCTGTGGAGAGGCTCTACTCATGTTTTTATTTATAAGAGCTAAAATAAATCTAGCTGGGGCTGCACA----CAACCTGCCTTCTCCATTTC----------TCTGTATCTAGA chr4 + 94230402 48246251 48246250 48247622 48246251 48246250 48247622 1372 CCCGTGGGGAGTGAGGGGGAGAAGGGGAGAGGCCGAGCGTGGTGCGAGACGGTCTCTCCTTCACCGGGGCTGCCTTCTTCATCTTCGTCGCGGTCTACTTTCTTTTTTCAGATGGCACTTTGACAGAAGATTAATTCAAGTCAGCTGCTGAAAATAATTATTGCATTATGGGAGCAGTAATCATTATTTAGAACATGATTAAATATGTCTGTGTCTATTGACTCTGCCTATGATTTATGTATTTGTTTAGTCAATAGTCTAATGTAAATGATGTAATTAATTATAGATGGTGGTGTCAGGTCATTGGTAAAAACAATCTGATGAGAACAAGGCCCCTGTTTTTTCC-TGACAGATGCGGAGGGAGGGCGGGAGGGACGGGCAGAGTTGAGGGAATTCCAGGGGAACTTTTTCATGTGTGAATGGCGGCTGGGATCTCAATTTGCATGTTGTCTTTCTCTTGTTCAGCATTCGTTTAGAAATTGAAATAACTTGTTAAGCAAAGGGGAAGGGAACACATGATTGCAAAGAGGACACCTGGGAGTAGTGACGGCGAGCAGCTAAAGAGCCAGCTGCTCCCTAACACGAGAGAGCGTGCCACTATCATTTACCGCTTCATAAAATTAAATGTTTTCCAAATTAAATCAGTAGGCAGCATGCAGGAAGACCTACTATCTCTAATAACAATTTTTCAATCAATATCGGGGGCCCTGCCGATCTGAAATCGGAGCGGAGGAGCCTGGGATTGGCCGGGG-GGGAGTG--GGGGGAAAG-------GAGGAGGTGGGGG--AGCTCTGAGCGGCGCAGCTTTCAATCAGAGCAAAAGTT-AAAAAATATA----TATATGCATGGTGGATTCTCCATCACTGTGAGTCTATTCCCCATAGATTTTTCTCTTAACTGATAATTCGGTCAGTCACATTCCTCAGAGGGAGGTCACGGGTCACCCCAGCCCCTGTCAGGCCTCAGAGAAACCATTTCCATTTTAATGCCACAGCTATAATCTATCAAAGATGTGATGTACAAGATACAATGAATTTAAGTGGTCTTCATATATCACTGAGCTTTCATGCCTTCACCTGGGTAATAGTCTGAATTACTCTCCCTACCTCACAATCTGTCACCCCCAGTAAAATAACTGCCACGCGGGTGTTAATGGCAGGTTTGTCCAAATTGGGGCCGTGGTAGCCGGAGGCATTATACATCATAAACTTTAGCATTCAGTGCTTAGCCCGG-CGGTGTCAACAATTGAAAATTATTCCGTAAATACTTCTGCGGGGCTGTTCTGCTCATGTTTTTATTTATGGGAGCGGAAATGAGCGTAGCTGGACCAGCACAGGGGCCATCTGCTTGTGCAATTGCACAGCTAATGCCTATATTTAGA ..:.:.....---..::x..:...::.:..::.::..x.x.:x:x:::..:.:::....x...:...x.....................x.-------...:................x:...........................................................................................:::..............................................................................................:............x..........x.:.........:.-..........:.:...---.:...------....x...............................:.....................................................x............................................:......:....x.:..............x.x.x.xx..:...:..x......:..................::.:.......x...:.................................................:...::.......:.-...................................x:......:....:..x.......x....x.....:x:.:....x...:....-.......--:.:...x:.-------..........:::--:.x.:....::x..x............:.x....:...-..........----.....x............x...:..................::.................................................:......:...........................................................................................................................................................................................................:..x..........:...:..................:::......::..x....x.....................:...........:..-x:.x.:.x.:.::.x.....xx...:.......x.....:..:.xx.:...:.................::....x:....:.::x.......:x.x.....----.x.:....:.x:x.x...x.----------:..:...:.... 10M3I78M7I248M1D16M3I5M6I287M1I88M1D7M2D9M7D13M2D38M1D10M4D395M1D102M4I20M10I12M 1178/1338 88.0% 1372/94230402 0.0% 53/1338 4.0% 36187270 NA +11868 chr4 + 190214555 84437745 84437744 84438073 329 TGATTTCTGTTGCTGTATTCCTTTTGCAACTTGGGTATTATTTACAATAAATTGAATCCTTTCCATATTTGACATATTACACTGATCTATGGCTTTGCTTTCATTTTGTCCTGTTAACTAGAAACCCACTTCATCATGAAATATGTTCCCCACACTTTTC----CCCATAGTGAGTAAAAACATTGATAAAGCATCATAAATTGTAGGTCATTTCTCAACTGCTTCCTGCTACAGTGAGGACTGGGAGAAGGAAAAGTAAGTACTGATCAATGGCCACTTAATAAAATTTATGCTGAATGTATAGACAAAAAAGC---ACTGGACGTGTGAGAAGC chr4 + 94230402 48248805 48248804 48249130 48248805 48248804 48249130 326 TGATTTCCAACGTTGTGTTTTTTT---AACCTGAATGTCATTTACAATACGTTGAACTCTTTTCTCTTCTGACATCTTATGCTGATCTATGAGTTGGCCTTCATTTTGTCCTGTTAAGTAGAAACCCACTTCATCATGAAATATGTTCCTCATACTTTCTCCAACCCAGGGAGAG-AAAAACATTGATAAA-CATCATA---TGGCAACCATTTCACAAAAGCTTCGAACATATCTCAGGAA-AGGAGAAGGAAAA-TAAATATGAAGCAACCGCTGCTTGTTGAGGTAGATGCTGATTCCATGAAGGAGTGAGTGGGACTCGAGGTTAGAGGAGC .......::x:.:...:..::...---...:..::.:.:..........x:.....::....:.x:x.:......x...::..........:x..x..:..................x...............................:..:.....::----....x:.x...-...............-.......---..xx:::......x...xx.....xx:.xxxxx.x....x-:............-...:..:x:.x...:x..::...:x.:.::.xx.......x.x:..::.x:.:x:..:---...x..x..xx...:... 24M3D133M4I11M1D15M1D7M3D40M1D13M1D58M3I18M 231/319 72.4% 326/94230402 0.0% 17/319 5.3% 36188940 NA +3502 chr4 + 190214555 84440674 84440673 84440759 86 CTGTTAAAATGGCAG--ACAGCCTCTCAGCATTTCCATTATAAAACCTGATTTTCAGGGATTTATAACTAAAC---TGAAGATTTCCTTCA chr4 + 94230402 81743797 81743796 81743887 81743797 81743796 81743887 91 CTGTTAACAGCGCTGCTGCAGTCTCTCAGCATTTCCATTATAAACCTCCATTTTCATGAGTTCATTTCTTGGCTAATAAAAGTTTCCTTCA .......x.xx..x.--:...:......................x.::x.......x.::..:..xx..x::.---.:..::......... 15M2I56M3I15M 64/86 74.4% 91/94230402 0.0% 5/86 5.8% 2696877 NA +38544 chr4 + 190214555 84443455 84443454 84443983 529 AGATATTATT-----ATTATTTTCATGACCACAGGGATTTTTTTTTAAATGTAGGTTTTTAAATGCCTGAGAAAATGGGGCAGTCACAGAACCATGATTTTAAACAAACTTTATTTGGGCGCATGACTGACTGGCAATTGTGTGCAATCATTTCAGCTGTCACA-GGCCCAGAGAAATGTGGGAGAGCTCTTCCATGAAATGTTTATATTTCATAAACAAAATGATGTGCTTAACAG----AGTGATGGGAGGGTTCCGGCTAATGCATTTTCCAATGTGTGAGGCAGATTATTAATGCGCTCCAGTAGCTGTTAATTTCAGTTTGCCGGAATGATTTATGGGGAGGTAAAGGAGAGAGACATAATCTAATTGAGATCAGAATCACTGTTCTAGCAGCAAAGCACCAACATGGACCGTAGGCACAGCAGAATAATTAATACCTAATAAGCAAATAATCCATTAAATTATTATAAACATTACTTTTGACAACTCTTTTGTTGGCAGATGGAAGAGGGAAAAAAAGAAAAAAGA--AACAAAA chr4 + 94230402 48252098 48252097 48252638 48252098 48252097 48252638 541 AGATATTCTTTTTCCATTCTCCCCACATAAAGAGGAATTTTATTTTAAATCTGGGCTTTTAAATGCCTGAGAAAATAGGGCGGTCACAGAGCCATGGCTTTAAACAAACTTTATTTGGGCGCTTGACTGACTGGCAATTGCGGGCAATCATTTTAGCTGTCACAAGGCCCGGAGAAATGTGTGAGAGCTCTTCCATGAAATGTTTATATTTCATAAACAAAATGATGTGCTTAACAGTCAGAGTGATGGGAGGGTTCCGGCTAATGCATTTTCCAATGTGTGAGGCAGATTATTAATGCGCTCCAGTAGCTGTTAATTTCAGTTTGCCGGAATGATTTATGGGGAGGTAAAGGAGAGAGACATAATCTAATTGAGATCAGAATCGCTGTTCTAGGAGAGGAGCACCACCACGGGCCCCAGCCGCGGCGGAATGATTAATATCTAATAAGCAAATAATCCGTTAAATTATTATAAACATTACTTCTGACAACTCTTTTGTTGCCGGTGGGGAGAGCAAAACAAGCAAACAGTATTAACAAAA .......x..-----...x.:::..::xxx.x...:.....x........x.:..:....................:....:........:.....::........................x.................:.x..........:..........-.....:..........x.......................................................----...............................................................................................................................................:.........x..x::.......x..:..:..x:..x.:.:..:....:.......:..................:.......................:.................x.:.xx..:....x:...x..:x...x.:x.--....... 10M5I149M1I72M4I291M2I7M 471/529 89.0% 541/94230402 0.0% 12/529 2.3% 36191357 NA +12276 chr4 + 190214555 84459793 84459792 84460134 342 ATTTTTTTTAATCAACCTAAACCTCTGACTAAAT-TAATAAGAGTTGAGTTTGACCTTTAAAATGCTAAAAAATACAGTTCCCA---GTATAATTCTTGTTCATCCCTGGACCAAACCATTCTCATAGTAAATTATGGCACTAACAGCTGGCTGCCAATGAAGTCAACTATTAATTGTATGTTCACTGCACTCCCTGATATAAATCAATATGAGCAATGAGCAATTGTCCTCAGTCTC---TAGATACAAAGATCTTACATTGCAAAATAATTTAAGGTTGGCTGTCAGCCTTCTTAGACTAGATGTCATTCAGTCTTCCCTTTGCTAAAGATATGA---TAAAAATGAACA chr4 + 94230402 48256653 48256652 48256985 48256653 48256652 48256985 333 ATTGTTTTCAGCCAGTCGGAA--TCCAACCAACCCTAATGGAAGTTGAGTTTGACCCTTAAAATAC--AGAAATACAGTTTCTACTAGTATAATTCTTCTT-ATTCTT-----AAACTGTTACCATTGTAAATTATGGAGCTAACAGCTGGCTTGCAATGAAGTCAGCTATTAATTGTACGTTCACTACCCTGCCTTGCGTAAATCAATATGAGAAACGAGCAGTCTCCTACCATCCAGCGCAGATACAGATACTCTGCACTGGGAAGTAATTTAAGGGTGGGTGTCAGATCACTTGG----GAAGTCTTG-----TTTCCTTTACAGAAAACAGGACAGTGAAAAAAAACA ...x....:.::..::.x:..--..::..:..x:-....:::..............:.......:.--.:..........:.:.---...........x..-..:.:.-----....::..x:...x...........x:.............xx...........:............:.......:.x..x...x:::..............x..:.....:.:x:.:x.x:..:x---:.......:.x.:::.:..:..x:..:..........x...x......x::x...:.----..x...x.x-----..:.....:.x:..:.:.x..---.:....x:.... 21M2D11M1I31M2D16M3I14M1D6M5D125M3I57M4D9M5D21M3I12M 238/323 73.7% 333/94230402 0.0% 29/323 9.0% 36203140 NA +16555 chr4 + 190214555 84468425 84468424 84468869 445 GGAAGGAAAATAAAAACTCAGAAAACTCTTCAGTTTAAAGAAAACTACTGTGCTGTACCCCAGCATAACTGCGCAAAGCATGTTTGCAGCAGTAGATTGGATTAGCTGTCTATTGTACAATAAATGAGTTAGAAATCCAAGCAGTAAGTGTGCTGACATTTTGT-------------------------------------------------------TGTAAAATTCATGTGTCAAGAAGTCTTTGACAAGCAGTATTTCCATACTTAAATTGAGCAATGGATTGAAGCCTGAAA----AAAAGCAAAGAGAATGTATTCTGCAGT--TGTCTTTTAAATTGTGTTACCTATTGATAGTTTTCTACCATGGAAAAAGCAATCCTTCCAATATAAAGACATTGCAAACCCAGAAAACAGGCTCTAATTAAATCAGTTATGTTGCATTATATCATGTAAACAATGAGTGTCTATGGCAATCTTTCCATGGAAAAATTAAGTTAAAC chr4 + 94230402 48257731 48257730 48258223 48257731 48257730 48258223 493 GGAAAGAAAATACAA-----GGAAGCTATCGAGTTTAAAGGGACC------GTTGTGGAGGAGTGCAACTGCGCAAACCTTGTTTTCGGGAGCGGATTGGATTGTCTGTGTATCGTACCATAAATGGGTTAAGCACACAAGCAGGAGGTGCACAGTTCTTCTTTGGGGTGTTTTTCTTTTTTTTTTCATTATCTTTCTTTCTCTGCCTTCCTTTAATTCTGTGCAATTCACGTGTCAGGTACTCCTTGACAAACGTTATTTCCATCCTTAAATTGAGCAGTGAATTGAAACTGGCAAAAGGAAAGGAGAAGAGAATATATTCTGTGGCTGTGTCTTTTAAATTGCTTTATCTATTGATAGGTTTGTCTCATGCTAAACACAATTTCAACAATAT--AGAAAGCACAGGCTGAAAAACTGAGCTCTAATTAAATCAGTAACGTTTCATTATTTCACGGGAACAATGCAAGTCTAAAGCGATCTTTCTGCAGAAAAATTAAATCAAGC ....:.......x..-----.:..:..x.:x.........::.x.------.:...:xxxx..:::...........x.x.....x.:.x..::.........:x....x...:....x.......:....::x.:x.......x.:...::.x.x:x..:.x.-------------------------------------------------------...:x......:......:.x.x..:.......:.:x.........x.............:..:......:.:x.x..----...:.x:........:.......::.:--..............:x...:..........x...x.x:....xx...x:....:::xx......--...x.x::..::.:x.:...x:::.................x.:...x......x...:.x:.......x:x.....x:..:.......::::..........:.:..:. 15M5D25M6D113M55I78M4I27M2I64M2D110M 312/432 72.2% 493/94230402 0.0% 74/432 17.1% 36210694 NA +3028 chr4 + 190214555 84470403 84470402 84470459 57 GCCAGCAGATGGAGCAAGGGAAGAGGGGTACATCACAAAGTGTTCACGGATCAGGTC chr4 + 94230402 192999 192998 193055 192999 192998 193055 57 GCCAGCAGACTGAGAAAGGGAAGAGAAACCAATCACAAAGAGCTCAGAGATCAAATC .........:x...x..........::::xx.........x.:...x:.....::.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 84277404 NA +16964 chr4 + 190214555 84470892 84470891 84471183 292 GGCCAACTTGATTTGCTAATCTACAGTCTGTGCTTCTGGAGAGGAAA----------AGAAGGGGGAGTTCACAATCCACAAACCAATTTGTGTTGTTTCTGCAACACTGCAAAAGTGCGACTCATGAATATGCTAATGAAATAGCAATGAGAGTTTTGGCACTATTTCATCACCTCAACTAGATTAGAGAGTAATAACACTATGGGTTTACACATCTTCAGAAACTGCTGTGGT----------------------AGTAGAAAAAAATGAATCTGTGATATTTATAATGCGACAAAAATTACAACCATGCTACAATAAAATA chr4 + 94230402 48258396 48258395 48258719 48258396 48258395 48258719 324 GGCACGCTCGCCTCGCTAATCCTCAATTTGCCATTCCGAAGAAAAAAGCGACGAGGAAGAAGGGGGAGTTCACAATTCACAAACCAATTTGTGTTGTTTCTGCAACACTGCAAAAGTGCGACTCATGAATATGCTGATGAAATTGCAGTGCGAGTTTTGGCACCATTTCATCACCTCGGCTAGATTAGGGAGCAATAACACTATAGGTTTACACGTCTTCGGGAACTGCTGCGGCggggcgggggcgggggggggggggggggaagggATAGGGCTGCAATGTTTATAATTCGACAAAAATTGCATTGCCTCTCCCGTAAAATA ...xx:..:.x:.:.......:x..:.:..:xx...:.:...::...----------...................:..........................................................:.......x...:..x............:.............::.........:...:...........:.........:.....:.:........:..:----------------------:.x:.:..:::..:::x...::..:........x...........:..x:xx:x..x.x:....... 47M10I178M22I67M 233/292 79.8% 324/94230402 0.0% 32/292 11.0% 36212496 NA +3184 chr4 + 190214555 84490818 84490817 84490880 63 GGGGGAAGGGAATGGAAGGAAGGAAGGGGGGAGGAAAGAAAAAAGGAAGGAAAACAAAAGAAG chr4 + 94230402 88792827 88792826 88792889 88792827 88792826 88792889 63 GGGGTGAGGGGGAGGAAGGAGGAGAGAGGGGAGGAAAGCTAATAGGCATGAAAAAAAGAAAAG ....x:....::x.......:.::..:...........xx..x...x.x.....x..:.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -4302009 -89928393 +3092 chr4 + 190214555 84490819 84490818 84490865 47 GGGGAAGGGAATGGAAGGAAGGAAGGGGGGAGGAAAGAAAAAAGGAA chr4 + 94230402 64575614 64575613 64575660 64575614 64575613 64575660 47 GGTGAAGGGAACTGACGGAAGAAAGGAGGGAGGAAAGGAAAAAAAAA ..x........:x..x.....:....:..........:.....::.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 19915205 NA +3082 chr4 + 190214555 84490843 84490842 84490897 55 GGGGGGAGGAAAGAAAAAAGGAAGGAAAACAAAAGAAGAAAGAAAGGAAGGTATT chr4 + 94230402 73633586 73633585 73633638 73633586 73633585 73633638 53 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAG--AGGTGTT ......:...::.::..........:...x....:..:...:....--....:.. 46M2D7M 42/53 79.2% 53/94230402 0.0% 2/53 3.8% 10857257 NA +3784 chr4 + 190214555 84493485 84493484 84493551 67 TTGGCCGTGGCCATCTCGGCAGCGTGCTTCTTCCTCCACTTGGTCCGGCGGTTCTGGAACCAGACCT chr4 + 94230402 84420702 84420701 84420768 84420702 84420701 84420768 67 TTGGCCGCCTCCAGGTCGGCGGCGAGCTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAAATCT .......:xx...xx.....:...x...x.:x.:........x.x.................:.:.. 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 72783 NA +3000 chr4 + 190214555 84550944 84550943 84551000 57 GCCTGACTGTTAAAAGAAAAACAAATAAACAGAAAACAACAACAACAACATCAACAA chr4 + 94230402 27313581 27313580 27313637 27313581 27313580 27313637 57 GTCAGATTATTATGAGGAAAAACAAAAAACAGAAAACAACAACAACAACAAAAAAAA .:.x..:.:...x:..:....xx..x........................xx..x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 57237363 NA +3584 chr4 + 190214555 84557216 84557215 84557256 41 CCTGTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...x:.................................... 41M 39/41 95.1% 41/94230402 0.0% 0/41 0.0% 9309168 NA +3002 chr4 + 190214555 84557220 84557219 84557254 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 71955915 NA +3253 chr4 + 190214555 84557220 84557219 84557258 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 9309170 NA +3139 chr4 + 190214555 84557221 84557220 84557260 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 9309172 NA +3316 chr4 + 190214555 84557221 84557220 84557256 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 71955917 NA +3102 chr4 + 190214555 84557223 84557222 84557258 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 71955919 NA +3034 chr4 + 190214555 84560244 84560243 84560298 55 GATCTTGGACAATTCACTCAACTTTTTCATACCTCAGTTTTCTCACTTGTAAAAT chr4 + 94230402 83501141 83501140 83501195 83501141 83501140 83501195 55 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAAT ..:::...:...x.:...:...:.x.x::.:...........:...:........ 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 1059103 NA +8034 chr4 + 190214555 84609417 84609416 84609533 117 TTTTCTTTGTAGGTGGAAAAACTGGTGGATACGTGGAATTCTCACTCTAACTATGATCTCGTTGTTTTTCCTGATCATCTATATGGGATCCTTCATGCTGATGCTTCTTGTAAGTTT chr4 + 94230402 48267861 48267860 48267977 48267861 48267860 48267977 117 TTCTCTTTACAGATGGAAAAATTGGTGGATTCGTGGAATTCTAACGCTGGCTATGATTTCCATGTTTTTTCTGATCATATACATGGGATCTTTCATGCTGATGCTTCTGGTGAGTTT ..:.....::..:........:........x...........x..x..::.......:..xx.......:........x..:........:.................x..:..... 117M 98/117 83.8% 117/94230402 0.0% 0/117 0.0% 36341556 NA +3119 chr4 + 190214555 84613474 84613473 84613539 66 GTGGCGCACACCTGTAGTCCTAGCTACTCAGGTGGCTGAGGCAAGAGAATCACTTGAACCCAAGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:....:--......:.:.......::::x.......x.xx.x...x............::.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 8580273 NA +8411 chr4 + 190214555 84617539 84617538 84617668 130 TGTTAATGTTTTCTCTTGGTTTCAGGTTCTGGGCATCCAAGTGAAATGCTTCCATGAAATTATCACTATAGGTTATAGAGTCTATCATTCTTATGATCTACCATGGTTTAGAACACTAAGTTGGTAAGTA chr4 + 94230402 48270410 48270409 48270539 48270410 48270409 48270539 130 TGTTCCTTCTTTTTCTTAATTTTAGGTCTTGGGCATCCAAGTGAAATGTTTCCATGAAATCATTACTATAGGTTACAGAGTGTATCACTCGTATGATTTGCCGTGGTTCAGATCCCTCAGCTGGTAAGTA ....xx.x:...:....::...:....::...................:...........:..:...........:.....x.....:..x......:.:..:.....:...x.x..x..:......... 130M 105/130 80.8% 130/94230402 0.0% 0/130 0.0% 36347129 NA +11289 chr4 + 190214555 84619368 84619367 84619697 330 AAAAGCTAATTGTTTTTAAATTATAGGTACTTTCTATTGTGTGTAAACTACTTTTTCTATGGAGAGACTGTAGCTGATTATTTTGCTACATTTGTTCAAAGAGAAGAACAACTTCAGTTCCTCATTCGCTACCATAGATTTATATCATTTGCCCTCTATCTGGCAGGTAAGT-TAAGGAATATTCTGTATTGATATATAGTTAACAT-ATT-TTCCATGTTTATTTTTATTTCTGTTATTTTAATTAGTAATTTTTTGGTTAAATTTTATTCCAGCCTCTCTTTTTCATTGTTTCTTGTGTATAAAGCTATTTCTTTCATCATGTTCTTAAAT chr4 + 94230402 48272665 48272664 48272968 48272665 48272664 48272968 304 AATAGCTA-CCATTTATATGTTTTAGGTATTTCTTGCTGTGTGTCAATTACTTTTTCTATGGGGAGACGGTGGCTGATTACTTTGGTACGTTTGTTCAGAGAAGAGAACAGCTTCAGTTCTTAATTCGTTACCACAGGTTCATCTCTTTTGCACTCTACTTGGCAGGTAAGTGTGGGGAA----------TGATAGAAATTAAAGATCATTGTGCTGCATTTGTTCTTGTGCCTATTTGTTTA-----TGTTTTCTTGGTGGTTTTTTGTT---GTTGTTCTTTTTC-TTGCTCCtttttt---------tttgttttgttttgttttTAAAT ..x.....-:::...x..x:..x......:..::.::.......x..:..............:.....x..:........:....x...:........:...::......:.........:.x.....:.....:..:..:..x..x.....x.....::............-.::....----------.....x.x.x.x..x..-...-.x.::::...:..:..:.x:..:..xx....-----.:x...:.....x:xx....:..---.::x:........-...:.:...x.x.---------...x...::.:x....:...... 8M1D163M1I7M10D17M1I3M1I31M5D23M3D13M1D13M9D23M 223/301 74.1% 304/94230402 0.0% 32/301 10.6% 36346703 NA +3206 chr4 + 190214555 84624252 84624251 84624306 55 AGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAACAAACAAAAAAAAAAAAACT chr4 + 94230402 28489351 28489350 28489405 28489351 28489350 28489405 55 AAAGAAAGCAAGACTTGGTTTGAAAAAAAAAAAAACAAACACAAGAACAAAATCT .:.x.:.........:x..:.x...................x..:..x....x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 56134901 NA +6687 chr4 + 190214555 84631781 84631780 84631905 125 AATTGTACAACGAGCACATGTTTTTTGTTCTTGAACAGGTTTCTGCATGTTTGTACTGAGTTTGGTGAAGAAACATTATCGTCTGCAGTTTTATATGGTGTGTATTAACTATTATTCCTTAGTCA chr4 + 94230402 48273822 48273821 48273941 48273822 48273821 48273941 120 AGTGGTACAAACTACACTTACTTTATTTT-----ACAGGCTTCTGCATGTTTGTTCTGAGTTTAGTGAAGAAACACTATCGTCTGCAGTTTTACATGGTGTGTATTACCCACTTTGCTGTGGTCA .:.x......xxx:...x.::...x.x..-----.....:..............x........:...........:.................:.............x.:.:.x.x.:x.:.... 29M5D91M 96/120 80.0% 120/94230402 0.0% 5/120 4.2% 36357959 NA +3647 chr4 + 190214555 84632985 84632984 84633066 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGGATCACTTGAACCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........x.::........x.xx.x.:.x..........::.:..x.:x:.....:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 8599784 NA +10063 chr4 + 190214555 84633803 84633802 84633975 173 AGCTGCACTGATCAGTTGTGTTCACTAATTTTTGTATTGTTGGGCTATTAACAGTTCGCATGGACTCATGTCACTTTACTGATAACTGTCACTCAGTCACACCTTGTCATCCAAAATCTGTTTGAAGGCATGATATGGTAAGGCAACAGAATTATGCTGCTTTATAAGTATGT chr4 + 94230402 48275868 48275867 48276039 48275868 48275867 48276039 172 AGATGTACTGATCCGT-GTTCTCACTAACTGTTGTGTTGTTGCATTGTTAACAGTTCGCATGGACTCATGTCACTTTGCTGATCACTGTAACTCAATCTCATCTAGTCATCCAAAATCTCTTTGAAGGCATGATCTGGTAAGGGGACAGTAATAAACTAATTTGTAACTCTAT ..x..:.......x..-..x:.......:.x....:......x::.:..............................:.....x.....x.....:..x..:..x..............x..............x........x:....x.x..x:..:x...:...x.x.:. 16M1D156M 139/172 80.8% 172/94230402 0.0% 1/172 0.6% 36357935 NA +6716 chr4 + 190214555 84635262 84635261 84635372 111 AGGTTCCTTGTTCCAATATCAAGTGTTATCTGCAATGACATAACTGCTTACCTTTTTGGATTTTTTTTTGGGAGAACTCCATTAATTAAGGTA---ATGGAAAAATTTTATAAG chr4 + 94230402 48277784 48277783 48277897 48277784 48277783 48277897 114 AGGTTTCTGGTGCCAATTTCAAGTGTTATCTGCAATGATATCGCAGCTTACATTTTTGGATTCTTTTTTGGCAGAACTCCCTTAATTAAGGTATGTATTGAAGTATTCTTTGAG .....:..x..x.....x....................:..x:.x......x..........:........x........x............---..x...:x...:.x.:.. 93M3I18M 93/111 83.8% 114/94230402 0.0% 3/111 2.7% 36357478 NA +5682 chr4 + 190214555 84638921 84638920 84639021 101 TAGTTGTCTCCTAAAAAGACTTGGGAAGGATTCATTGGTGGTTTCTTTTCCACAGTTGTGTTTGGATTCATTGTGAGTATTACTAAGATTTTTATTTTGTA chr4 + 94230402 48278324 48278323 48278424 48278324 48278323 48278424 101 TAGCTGTCTCCCAAAAAGACCTGGGAAGGGTTCATTGGAGGTGGCTTCTCTACAGTTCTATTTGGATTTGTTGTAAGTAACCACAGGGCTTTCCTTTTATA ...:.......:........:........:........x...xx...:..:......x.:........::....:....x:xx:.:.::...:x....:.. 101M 76/101 75.2% 101/94230402 0.0% 0/101 0.0% 36360597 NA +7592 chr4 + 190214555 84640815 84640814 84641001 187 TTTTGTTTTGTTTTTAATATCAGGCTGCCTATGTGTTATCCAAATACCAGTACTTTGTCTGCCCAGTGGAATACCGAAGTGATGTAAACTCCTTCGTGACAGAATGTGAGCCCTCAGAACTTTTCCAGCTTCAGACTTACTCACTTCCACCCTTTCTAAAGGCAGTCTTGAGACAGGTACAGTAAAA chr4 + 94230402 48279214 48279213 48279395 48279214 48279213 48279395 182 TCTTGTTCTGCTTTC-----CAGTTTTCCTATTTCTTGGCTCAACATCAATACTTTGTCTGCCCAGTGGAATATAACAGTGAAACCAACAGATTTGTGACAGAGTGTGAACCTTCAGAGCTCTTCCAGCTGAAGAAATACTCCGTGCCACTATTGCTTCAGGCTGTGTTGGGATGGGTAAGGAAAAA .:.....:..:...:-----...x:.x.....x.x..:x.:x..:.:..:.......................:x:x.....x::x...xxx..:........:.....:..:.....:..:........xx...xx.....xx.x....:x..x..xx....x..x...:..::....x:.x.... 15M5D167M 129/182 70.9% 182/94230402 0.0% 5/182 2.7% 36361601 NA +9085 chr4 + 190214555 84643021 84643020 84643149 129 TAGGAAAGAGTGAGCTTGTACCCTTTCCAGATCCACAGCATTGCACTGTCAACCTTTGCATCTTTAATTGGCCCATTTGGAGGCTTCTTTGCTAGTGGATTCAAAAGAGCCTTCAAAATCAAGGTGTGT chr4 + 94230402 48282173 48282172 48282301 48282173 48282172 48282301 129 TAGGAGACAGTGAATATGTACCCATTCCAGATGCACAGCATTGCACTGTCAACATTTGCCTCGCTAATTGGGCCGTTTGGAGGATTCTTTGCCAGTGGATTTAAACGAGCTTTCAAAATCAAGGTGTGT .....:.x.....::x.......x........x....................x.....x..x:.......x..:........x........:........:...x....:.................. 129M 111/129 86.0% 129/94230402 0.0% 0/129 0.0% 36360848 NA +7829 chr4 + 190214555 84645216 84645215 84645328 113 CTAAAGGATTTTGCAAATACCATTCCTGGACATGGTGGGATAATGGACAGATTTGATTGTCAGTATTTGATGGCAACTTTTGTACATGTGTACATCACAAGTTTTATAAGGTA chr4 + 94230402 48283786 48283785 48283898 48283786 48283785 48283898 113 CTGAAGGATTTTGCAGACACAATCCCTGGGCACGGTGGCATAATGGATCGCTTTGATTGTCAGTACTTGATGGCTACTTTTGTTCATGTCTACATCACCAGTTTCATAAGGTA ..:............:.:..x..:.....:..:.....x........:x.x..............:........x........x.....x........x.....:........ 113M 96/113 85.0% 113/94230402 0.0% 0/113 0.0% 36361430 NA +8581 chr4 + 190214555 84648545 84648544 84648839 295 TTTTATCATTAGGGGCCCAAATCCCAGCAAAGTGCTACAGCAGTTGTTGGTGCTTCAACCTGAACAGCAGTTAAATATATATAAAACCCTGAAGACTCATCTCATTGAGAAAGGAATCCTACAACCCACCTTGAAGGTATAACTGGATCCAG-AGAGGGAAGGACTGACAAGAAGGAAT----------TATTCAGAAAAACACTGACAGATGTTTTATAAATTGTACAGAAA---AATAGTTAAAAATGCAATAGGTTGAAGTTTTGGAGAT----ATGTTTCTCTC----------TGAAATTACTGTGAATATTTAACAA chr4 + 94230402 48284952 48284951 48285259 48284952 48284951 48285259 308 TTCCATTGACAGGGGCCCAAATCCCAGCAAAGTACTGAAGCAGCTGTTGGTCCTTCAGCCCGAGCAGCAGCTCAACGTGTACAGAACCCTGAAATCTCATCTTGTCGAAAAAGGGATCCTGCAGCCATCTCTGCGAGGGTAGTTTGTCACAACAGAGGAACGG--TGAGAAAAAGACATTCAGACGTTGTCTGTGGAAAAGCACTGTAAG-------------TGTGCACAAAGGTAATGGCTGAAGAAAGAATACATCGTGATCTGGAGGAGGTGAATGTTTCTCTCCTTAAAGGAACGCGAATGCTGTGACTTTCCAATAA ..::..::x:.......................:..:x.....:.......x.....:..:..:......:.x..::.:..:.:.........:x.......::.:..:.....:.....:..:..xx.::..x::.x:..::.x.x:x..:-.....:.x..--...x..:...:x..----------.x.x::.....:.....xx..-------------...:..x...---...:.:.:..:.x:x....x:.:.x::.:.x.::..x----...........----------:.x:.x.:......x.x.::..:.. 152M1I10M2D14M10I21M13D10M3I37M4I11M10I25M 191/280 68.2% 308/94230402 0.0% 43/280 15.4% 36363593 NA +3132 chr4 + 190214555 84676705 84676704 84676765 61 TATAAATGGATTTCAAAAACAATGTTGAGTAAGAAAGTTACAGAAGGGCAAAAACAGTATA chr4 + 94230402 13991082 13991081 13991142 13991082 13991081 13991142 61 TGTAAATAGATGTCTAAAACAATATGGGCTAAGGGGGTCAAAGAAAAGCAAAAATAGTGTA .:.....:...x..x........:.x.:x....:::..:.x....::.......:...:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 70685623 NA +3114 chr4 + 190214555 84679819 84679818 84679905 87 TTCATATATATATATATATATATACACACACACACACACACACACACGTACGTGTGTATATATATATATATATGTATGTATGTATTT chr4 + 94230402 74526040 74526039 74526125 74526040 74526039 74526125 86 TTCCTGAAAATAT-TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ...x.:x.x....-.:..x..xx.x.x....xx.x.:x.........::..:..x::...:.:.x.......:....:......... 13M1D73M 60/86 69.8% 86/94230402 0.0% 1/86 1.2% 10153779 NA +3228 chr4 + 190214555 84679822 84679821 84679895 74 ATATATATATATATATATATACACACACACACACACACACACACGTACGTGTGTATATATATATATATATGTAT chr4 + 94230402 54005688 54005687 54005761 54005688 54005687 54005761 74 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTAT .:.:....:...x..........:.............x.x.:x:..x.xxx..:.:.x.x.xx..:........ 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 30674134 NA +3036 chr4 + 190214555 84679823 84679822 84679862 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 80270741 NA +4977 chr4 + 190214555 84679823 84679822 84679892 70 TATATATATATATATATATACACACACACACACACACACACACGTACGTGTGTATATATATATATATATG chr4 + 94230402 44243240 44243239 44243309 44243240 44243239 44243309 70 tgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATG .:..................:.:.....x................::......:.:.x.:.:........ 70M 59/70 84.3% 70/94230402 0.0% 0/70 0.0% 40436583 NA +3988 chr4 + 190214555 84693755 84693754 84693837 83 CGTGGTGGTACACGCCTGTAGTTCCAGCTACTTGGGAGGGTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:....--..................::...x....x.xx.x...x.:...........:..x.xx:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 8660558 NA +3259 chr4 + 190214555 84708910 84708909 84708984 75 TCTGAGTCATAATCTGCAAGGATCCAGGGGAAGACAGGATACTGCATGAGATCATTATATGATCTGCCAGCCAAA chr4 + 94230402 34094843 34094842 34094917 34094843 34094842 34094917 75 TCTGATTCATAGTTGGTAAGAACCCAAGGGAAAATAGGGTACTGATTTAAATCATTGTAAGTGCGACCTGACAAA .....x.....:.:x.:...:.:...:.....:.:...:.....xx.x.:......:..x.xx.x:..x.x.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 50614067 NA +3272 chr4 + 190214555 84711720 84711719 84711811 92 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGTTTGAACCTGGGACGCGGAGGCTGCAGTGAACTGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:....x......:.........:.::........x.xx:x...x.::.......::.:.xx:xx:.....:..------:.x...:..... 74M6D12M 59/86 68.6% 86/94230402 0.0% 6/86 7.0% 8678516 NA +4219 chr4 + 190214555 84728390 84728389 84728472 83 CATAGTGGTGCATGACTGTAATTCCAGCTGCTTGGAAGGCTGAAGCGAGAGGATTACTTGAGCCCAGGAGGTCCAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.........:.--....:........:....:........:x.xx.x.:.x:......:.....:..x.:::.....:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 8695193 NA +4208 chr4 + 190214555 84738471 84738470 84738544 74 GTGCACCTGTAGTCCCAGCTATTTAGGAGGCTGAGACATGAGAATCACTTGAACCCGAAAGGTAAAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.......:..:::........x.x..x...x...........::...x.xx:..:..... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 8705267 NA +3096 chr4 + 190214555 84744713 84744712 84744782 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 8711516 NA +12942 chr4 + 190214555 84752848 84752847 84753120 273 TTTTTAAACCTGTTTTATGTTTACAGT---TTATTAGCTAATCAACATCAACGTGCAAAAGTAAGTG------ATAAGCCCCTGCTATATGGTTTTGTGTAAACTACAGTAGTTCATTCGTTTTGAAAAGTCACCAATATTTAT------GTCA-----ACTGAACTATTAGTTACTGTAATGAATAGTATTTAGACTCTAAAGTTATGAAACTATCCTGCAAGCCCTCTGCAAAAA-TGTGCT---------------TCAGTGAATTTCCACGTGAATACATTTTCAAAGCAGGAAACCAGGCAGCA chr4 + 94230402 87545895 87545894 87546203 87545895 87545894 87546203 309 TTTATTAACATGTTTTACATTTACAATCTTTTATTAGCTAATCAACATCAACATGCAAAAATAAGCGCTAAATACAAACCTCTACAATATGGTTTTGTTTAAACTACAATGGTTTAATTCTTTTCAAAAGTCGTAAGGATGTGTTCTGTAGTCATTAAAATTGAACTATTAGTTTCAGTCATGAATACTATTTAGGCCCTAAAATTATGTAATTATCCTGCAAGGCATCTTCAGAAACTTTGCCCAACACTTAAGAATACCAGCTCATTTTCATGTGAGTACATTCTCAAAGCAAGAAATAAGGCAGTA ...x.x...x.......::......:.---......................:.......:....:.------.:..:..:..:.x............x.........:.:...:.x.:x....x.......::x.:x..x.:.------....-----.:.............x.x..x.......x.......:.:.....:.....x..:...........x.x...x..:...-.x...:---------------:...:xx....:..:....:......:........:....:x......:. 27M3I37M6I71M6I4M5I78M1I6M15I50M 216/273 79.1% 309/94230402 0.0% 36/273 13.2% -2793047 -91437355 +3109 chr4 + 190214555 84767955 84767954 84768025 71 CACCTATAGTCCCAGCTACTCAGAAGGCTGATGTATGAGGATCGCTGGAGCCCAGGAGGCCGAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:....:.........:::........xx:x..x.:.x.:..x..:.....:..x::x:.....:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 8734748 NA +3003 chr4 + 190214555 84784856 84784855 84784908 53 ATGTATATATATATATATATATATATATATATATATACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ....:.:...::.:.:.:..x...:x.:....:..:.....:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 61537134 NA +3036 chr4 + 190214555 84784873 84784872 84784912 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 80375791 NA +3363 chr4 + 190214555 84794447 84794446 84794541 95 TTTAAAATAA--ATACAAAA--ATGAAGTTTTAATACTTCTATAATCAAAAGAAGAAAACAAAAAAAAATACTGACCATAATTTTGGAGGAGTTCCTCT chr4 + 94230402 66529279 66529278 66529374 66529279 66529278 66529374 96 TTCAAAATAACAATACAAAAGTATGAAAGGTGG---TTTCTGTAATCAAATGCAGATGACAAAAAAAAATACAGAACATCATTTTAAAAGATTGTATCT ..:.......--........--.....:xx.x:---:....:........x.x...x:..............x..x...x.....::.:..x.x:x... 10M2I8M2I11M3D63M 70/92 76.1% 96/94230402 0.0% 7/92 7.6% 18265168 NA +3099 chr4 + 190214555 84795631 84795630 84795704 74 GTGCGCCCATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAATGCTTGAACCTGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x::..:.:...........::........x.xx.x...:::........::::..x:xx:..:..:.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 8762427 NA +3068 chr4 + 190214555 84833640 84833639 84833716 77 TGAGACCTTGTCTCAAAAGAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAGAGAAGAGAAGAGAACAGAAC chr4 + 94230402 80070286 80070285 80070362 80070286 80070285 80070362 77 TAAAACAGTGTTACTAAAAAGGAATGGAAGAAAAAGAAAAAGAAAAATAATGAGAATGGCAAGGAAGTAAACAAAAC .:.:..xx...:x.x...:..:..x:...:.:...::.........:x..x.....x:.x.::....x:....:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 4763354 NA +3375 chr4 + 190214555 84842343 84842342 84842416 74 GTCATGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGTACCCAGGAGGTGGAGGTTG chr4 + 94230402 76033201 76033200 76033274 76033201 76033200 76033274 74 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..x:..x:.x....:.:...........::........x.xx.x...x......x......:..x.xx:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 8809142 NA +3723 chr4 + 190214555 84842646 84842645 84842712 67 GTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAGGAGAATTACTTGAACCCAGAGGC chr4 + 94230402 76033201 76033200 76033265 76033201 76033200 76033265 65 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ......--...x......:...........::..:.....x.xx.x...x:.............:.. 6M2D59M 53/65 81.5% 65/94230402 0.0% 2/65 3.1% 8809445 NA +3064 chr4 + 190214555 84850884 84850883 84850962 79 TGAGCTTTAGAATAAATAATTCTTATTTTTAATTTTATTTATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 46198777 46198776 46198854 46198777 46198776 46198854 78 TGGGTCTTGGGA-GAATATGTTGTGTTTATAATTGCATTTGTCCGGGCTTCTTTTTTTTTCTTTTCTCTTTTTTCTTCT ..:.::..:.:.-:....xx.:x.:...x.....x:....:..:.xx:..:.........:....:.:......:..:. 12M1D66M 53/78 67.9% 78/94230402 0.0% 1/78 1.3% 38652107 NA +3264 chr4 + 190214555 84854773 84854772 84854869 97 GTGGCACATGCCTATAGTCCCAGCCACTTGGGAGGCTGAGGCATAAGAATAGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATGGTACCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....::..:.--.:....:.....:.....::........x.x.:x...xx:........::.:..x.xx:..:..:..------..x...:.:... 10M2D67M6D12M 62/89 69.7% 89/94230402 0.0% 8/89 9.0% 8821572 NA +3103 chr4 + 190214555 84867334 84867333 84867393 60 ATAAGAGGTTTAGAAAGCAATAAAGAAAAGATATGCAAAATAAGAACAAACCACAGAAGA chr4 + 94230402 48890991 48890990 48891050 48890991 48890990 48891050 60 ATGAGAGATCTAGAAGTCAAACAAGAAAAGAAATAAAAAATAAGAATAAAATAAAGAAAA ..:....:.:.....:x...xx.........x..:x..........:...x:.x....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 35976343 NA +3267 chr4 + 190214555 84868035 84868034 84868098 64 GTCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x:...:.x......:.........::::........x.xx.x...xx:...........:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 8834834 NA +3086 chr4 + 190214555 84868175 84868174 84868251 77 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTATAAGCAATTCCTGAGGTTTTCCTTTTTCTTTCTTCTTCT chr4 + 94230402 28545465 28545464 28545541 28545465 28545464 28545541 77 AAAAGAAAAACAAAAACAACAAAAAAAAAAAACGCCTATTATTAACACCTACAATTTCTTCTTTCCTTATCTCTTTT ....:.....x.....x..x............x:::...x.x:..:x...:x::...::::...:...x::....:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 56322710 NA +3041 chr4 + 190214555 84873754 84873753 84873800 47 GTCTTGTTCGTTTTTTTGTGTTTTTTTTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 48643515 48643514 48643561 48643515 48643514 48643561 47 GCCTATTCCACTTTTTTGGGTGTTTTTTTTGTTTGTTTGTTTGTTTT .:..xx.:.::.......x..x......................... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 36230239 NA +3564 chr4 + 190214555 84885304 84885303 84885352 49 AAATATATACATACATACATATACATATGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857608 6857607 6857656 6857608 6857607 6857656 49 AAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ..........:.......:....x..:.......x...........x.. 49M 43/49 87.8% 49/94230402 0.0% 0/49 0.0% 78027696 NA +3063 chr4 + 190214555 84885305 84885304 84885356 52 AATATATACATACATACATATACATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857605 6857604 6857656 6857605 6857604 6857656 52 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ..x.x...:....:......:::...x:.........x...........x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 78027700 NA +3186 chr4 + 190214555 84906824 84906823 84906893 70 TATGTGGCCCAAGACAATTCTTCTTCTCCCAGTGTGGCCCAGGGAAGCCCAAAGATTGGACACACCTGCA chr4 + 94230402 47258236 47258235 47258305 47258236 47258235 47258305 70 TACACAGCCCAATGCAGTTCCTCTCCAGTCCACGTAGCCCAGGTAAGCCCAAGGGTTGGAGACCTCTGTA ..::::......x:..:...:...:.xx:.x::..:.......x........:.:.....x..x:...:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 37648588 NA +3475 chr4 + 190214555 84918798 84918797 84918877 80 CATATTTGTGTGTGTGTGTATATATATATAGATATATATATACACACACACACATATATATATATACACACACACATGTG chr4 + 94230402 85834537 85834536 85834616 85834537 85834536 85834616 80 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x.x...x.........:.:.:.:...x:..:..x::.....:.:::.x.:.:..:.x...::.....:.....::.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -915739 -93314663 +3091 chr4 + 190214555 84918822 84918821 84918863 42 TATATAGATATATATATACACACACACACATATATATATATA chr4 + 94230402 78281296 78281295 78281337 78281296 78281295 78281337 42 TATATGGGTGTATTAATACACACACACACATATATATATATA .....:.:.:...xx........................... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 6637526 NA +3034 chr4 + 190214555 84921592 84921591 84921678 87 AATATATATTCTATTATTTATAAGCAAATATGGAACCAAGTCTCTATTGCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 72888184 72888183 72888270 72888184 72888183 72888270 87 AAAATATATTTTTTTCTTGACCAACATAAATAAAAGCAGTTTTATATTGACTTTTAAATATTTTTTTCTTTTTCTTTTTTTTTAGAG ..x.......:.x..x..x.:x.:..x.x..::..x..:x.:.x.....x:..:xxxx.x.......:.....:.........x... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 12033408 NA +3678 chr4 + 190214555 84929775 84929774 84929840 66 GTGATGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.....:--....:.:...........::........x.x:.x...x.:...........:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 8896574 NA +3875 chr4 + 190214555 84950650 84950649 84950732 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:...........::........x.xx.x...x.::..........:..x:xx:.....:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 8917453 NA +3052 chr4 + 190214555 84979527 84979526 84979569 43 ATAAAGCAAACAAAAATAAATAGTAAAAAAAAAAAAAAAAAAA chr4 + 94230402 27722902 27722901 27722944 27722902 27722901 27722944 43 ATAAAAGAAACATAAATACATAGCAAAAAAAAAAAAAAAAAAA .....:x.....x.....x....:................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 57256625 NA +3711 chr4 + 190214555 84980500 84980499 84980578 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x::...........:..x.xx:..:..::. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 8947299 NA +3011 chr4 + 190214555 85002051 85002050 85002100 50 AGTAAGACTCTGTGTCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAG chr4 + 94230402 68414473 68414472 68414522 68414473 68414472 68414522 50 AATGAAAGTCTGTGACACCAGACAGGAGGAAAAAAAAAAAAAAAAAAGAG .:.:.:.x......x.....:.x.::.::..................... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 16587578 NA +3351 chr4 + 190214555 85004574 85004573 85004656 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAACTTGGGAGGGGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x.x..x...x.:.......:::.:..xxxx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 8971377 NA +3111 chr4 + 190214555 85066298 85066297 85066356 59 CTGCCTTCCTGCCTTCCTGCCTTCCTTCTTCCCCTCTCTCTCTCTCCCTCTCCCTCTCT chr4 + 94230402 708535 708534 708593 708535 708534 708593 59 CTGTGTTTTACCCTCCCTGCCTTCCCTCCTCCCCTCTCCCCATCTGCCTTTCCCCATCT ...:x..::xx...:..........:..:.........:.:x...x...:....:x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 84357763 NA +3061 chr4 + 190214555 85120374 85120373 85120456 83 TTAAAATATTTATATTTGTGTGCATATATATGTATACATTCATATATACACACATATATGTGTATGTGTGCATGTGTATATAC chr4 + 94230402 38031365 38031364 38031447 38031365 38031364 38031447 83 TCAGAATGTTTCATTTTAAGCTCATACAGGTGCTTATCACAGTGTATGCACGCATATATGTGTATGGGTGCATGCACACACAC .:.:...:...xxx...:x.:x....:.x:..:x..:xx:x:.:...:...:..............x.......:::.:.:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 47089009 NA +3068 chr4 + 190214555 85150146 85150145 85150259 114 TCCTCTTC-TTTTGCCTTGTACACCCTTAAACAAGCCCAATAAACGACAGCCTTGGTTTCCCTGTCTAAGCTGATCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 82640282 82640281 82640386 82640282 82640281 82640386 105 TCCTCTCCACCTTTTCTTACCTGCCTCTGAACTAGCACATTC--CTTCAACCTTGAGATT--------AGTTGGCTTCTTTGTCTCTCTCTCTCACCCACAGACACATACACACA ......:.-::..x:...::x::..::.:...x...x..x.x--.xx..:.....:xx.:--------..:..:::...:.x..............x....x.....:....... 8M1I33M2D16M8D47M 71/104 68.3% 105/94230402 0.0% 11/104 10.6% 2509864 NA +3085 chr4 + 190214555 85150211 85150210 85150253 43 TAAGCTGATCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601297 12601296 12601339 12601297 12601296 12601339 43 TAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...:x:.x..................x.....:.......... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 72548914 NA +3124 chr4 + 190214555 85150219 85150218 85150253 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248054 75248053 75248088 75248054 75248053 75248088 35 TCTCTCTCTCTCTCTCTCACACACACACACACACa ..................x................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 9902165 NA +3253 chr4 + 190214555 85150219 85150218 85150257 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 9902169 NA +3139 chr4 + 190214555 85150220 85150219 85150259 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 9902171 NA +3316 chr4 + 190214555 85150220 85150219 85150255 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 72548916 NA +3438 chr4 + 190214555 85150220 85150219 85150255 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 9902167 NA +3102 chr4 + 190214555 85150222 85150221 85150257 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 72548918 NA +3369 chr4 + 190214555 85196935 85196934 85196997 63 CTTATTTGTTTTC--TGGTCATTTTGTGGTGTTCTTTTCTCTCTCTTTCTTTCTTTCTCTCTTTT chr4 + 94230402 15438516 15438515 15438580 15438516 15438515 15438580 65 CTCATTTGTGTTCATTGCTAGTTTTGTGATTTTCATTTCTCTCTCTCTCTTTTTTTTTTTCCTTT ..:......x...--..x.x:.......:.x...x...........:.....:...:.:..:... 13M2I50M 50/63 79.4% 65/94230402 0.0% 2/63 3.2% 69758419 NA +3129 chr4 + 190214555 85225643 85225642 85225714 72 TGCCTACTTTTTCTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTACTTTTTTACCCATAACTTGCTGTTTTG chr4 + 94230402 31646071 31646070 31646135 31646071 31646070 31646135 65 TGCCTGCTTCCTTATGTCTGCCTTTTCCTCCTTTTTTTTTTTTTACTTTTTTGTC-------TGCTGCTGTG .....:...::.:x.x...x.:.:...:.::.....................::.-------.....:.x.. 55M7D10M 49/65 75.4% 65/94230402 0.0% 7/65 10.8% 53579572 NA +3483 chr4 + 190214555 85265587 85265586 85265664 78 CGGTGG-GCGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....-..:.x......:.........::.:........x:xx.x...x::...........:..x.xx:..:..:.. 6M1I72M 56/78 71.8% 79/94230402 0.0% 1/78 1.3% 9232388 NA +3118 chr4 + 190214555 85282017 85282016 85282082 66 AAAATTTCCTATTTAAAAGTTTGCATGGTTTATTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGT chr4 + 94230402 153436 153435 153501 153436 153435 153501 66 AGAAATACCTTATCAAATGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGT .:..x.x...xx.:...x......x...:..:x.:.x...................:.x.x.x... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 85128581 NA +3082 chr4 + 190214555 85282045 85282044 85282103 59 TTTATTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578261 26578260 26578319 26578261 26578260 26578319 59 TCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:..x.:...................:.:.x.x.x.xx..:...:...x...::..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 58703784 NA +3077 chr4 + 190214555 85282049 85282048 85282101 53 TTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578267 26578266 26578319 26578267 26578266 26578319 53 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ....................:.:.:.x.x.xx..:...:...x...::..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 58703782 NA +3211 chr4 + 190214555 85296988 85296987 85297051 64 AGTCCCAGCTACTTGGGAGGCTGAGGTGGGTGGGTCACTTGAGCCCTGGAGTTCGAGGCTACAG chr4 + 94230402 76033214 76033213 76033277 76033214 76033213 76033277 64 AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...........::........x:xx...::x.......:...x.:..:.:x:....::.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 9263774 NA +3073 chr4 + 190214555 85352047 85352046 85352083 37 TTTTTTGTTGTTGTTGTTTGTTTATTTGTTTTTGCCT chr4 + 94230402 25538668 25538667 25538704 25538668 25538667 25538704 37 TTTTTTGTTGTTGTTGTTTGTTTGTTTGCTTTTGTCT .......................:....:.....:.. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 59813379 NA +3067 chr4 + 190214555 85386661 85386660 85386719 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 9353455 NA +3322 chr4 + 190214555 85437079 85437078 85437150 72 GTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGCTGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.::..........::........x.xx.x...x.x.........:.:..x:.x:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 9403873 NA +3194 chr4 + 190214555 85456330 85456329 85456413 84 GATCCTTTTCACATCCTGGCTTCT-----CTCCTTATAAAGAAAAAGTTATATATGTATGTGTGTGTGTATATATATATATATATATAT chr4 + 94230402 85548385 85548384 85548473 85548385 85548384 85548473 89 GACCATTGTCACATCTGGACAATCAAAAGCTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..:.x..x.......:x.:.xx::-----...:.:.x...:.....:xx.xx...:.:.:........:...:..........x..... 24M5I60M 59/84 70.2% 89/94230402 0.0% 5/84 6.0% -92055 -94138347 +3386 chr4 + 190214555 85456360 85456359 85456441 82 ATAAAGAAAAAGTTATATATGTATGTGTGTGTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTAT chr4 + 94230402 25672298 25672297 25672379 25672298 25672297 25672379 82 ATAAAGAGAAAAATGTGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT .......:...:x.:.:.....:x....:x:.x..:xx....::.:.....:.:::.....::..:x......::.:..:.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 59784062 NA +3167 chr4 + 190214555 85456387 85456386 85456457 71 TGTGTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATAC chr4 + 94230402 27325492 27325491 27325562 27325492 27325491 27325562 71 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAAC ..:..:.:xx.:....:.:x.:x.:x..x..............:..........:..:::.....:x.x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 58130895 NA +3625 chr4 + 190214555 85456409 85456408 85456488 80 TATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTA--TATATATACGTATATATGTGTGTATATATATATACGTATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.:...x...................xx:....--:...:...:...x...::...x...::.:.:....::.:. 40M2I40M 58/80 72.5% 82/94230402 0.0% 2/80 2.5% -378124 -93852278 +3565 chr4 + 190214555 85456411 85456410 85456492 82 TATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x...............:.:.xx:.:..x::....:...:..x:.:::.:.x...::.:..:..:..... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -378122 -93852280 +3620 chr4 + 190214555 85456413 85456412 85456496 84 TATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTG--TGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x............--.....:.xx..:..x:.:..:......:x:..:..:.x...:.::.:.:....... 26M2D56M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -378120 -93852282 +4200 chr4 + 190214555 85456417 85456416 85456498 82 TATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x::.x.....x.........:.........xx..:..x.:...:..:...:x...:..:.x..:.:.:...:....... 82M 60/82 73.2% 82/94230402 0.0% 0/82 0.0% -378116 -93852286 +3323 chr4 + 190214555 85456424 85456423 85456515 92 GTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACAC chr4 + 94230402 79265519 79265518 79265609 79265519 79265518 79265609 91 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC .............::.:......xx.:.......:..:.::....:::.:::.x.:...:x.:.::x....-....x:x:.:.:.x.::... 71M1D20M 58/91 63.7% 91/94230402 0.0% 1/91 1.1% 6190905 NA +3120 chr4 + 190214555 85456426 85456425 85456502 77 GTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTG------------------TGGCTGTATATACATACACGTGTGCACACGCAAACATA .............:.......------------------..xx........:...:....:.:.....:..x...:. 21M18D38M 49/59 83.1% 59/94230402 0.0% 18/59 30.5% 6190907 NA +3004 chr4 + 190214555 85456431 85456430 85456490 60 TGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACA chr4 + 94230402 86633924 86633923 86633983 86633924 86633923 86633983 60 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCA ..x.:...::..:..:x:.....:.x:.....:...:....:......:..x:....:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -1177493 -93052909 +3150 chr4 + 190214555 85456445 85456444 85456520 76 TGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACACACAGT chr4 + 94230402 89748651 89748650 89748726 89748651 89748650 89748726 76 TGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACAGT ...:..:.....:..xx:x:.:....x..:.:...:.x:..::...:........x:.:.::x.x.....:..... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -4292206 -89938196 +3191 chr4 + 190214555 85456471 85456470 85456520 50 TATATATATATACGTATACACACACACACACACACACACACACACACAGT chr4 + 94230402 66743631 66743630 66743680 66743631 66743630 66743680 50 TATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGT ....x...x....:.x.....x...x..x:.................... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 18712840 NA +3529 chr4 + 190214555 85463635 85463634 85463754 120 GCATATATATACGTATGTGTATATATATGTGTATATATATACGTATGTGTATATATGTGTATATATATGTATGTGTATATATATGTGTATATATATGTATGTGTATATATATATGTATGT chr4 + 94230402 89812967 89812966 89813085 89812967 89812966 89813085 119 GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCT-CAAGTTTTTATGAACAGGCATGT .......x...x:...........x..x:..:x.xx...:.:..:::x::x:x:...:....:.x:x...:.....:.:.....:...x..x..x.-:.x..x.x...:x.:.x.:.... 96M1D23M 76/119 63.9% 119/94230402 0.0% 1/119 0.8% -4349332 -89881070 +3348 chr4 + 190214555 85463647 85463646 85463707 61 GTATGTGTATATATATGTGTATATATATACGTATGTGTATATATGTGTATATATATGTATG chr4 + 94230402 86633931 86633930 86633991 86633931 86633930 86633991 61 GCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .::..:...x:.......x.:....:..:...:...:....:..x.....::..x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -1170284 -93060118 +3631 chr4 + 190214555 85463672 85463671 85463780 109 TATACGTATGTGTATATATGTGTATATATATGTATGTGTATATATATGTGT----ATATATATGTATGTGTATATATATATGTATGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812949 89812948 89813060 89812949 89812948 89813060 112 TATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ....:..xx....x.:.:-.::....x...x:...........x..x:..:----...:..:..:.x::x:x:..:::.....x:x...................:.x..x.. 18M1D32M4I58M 74/108 68.5% 112/94230402 0.0% 5/108 4.6% -4349277 -89881125 +3428 chr4 + 190214555 85463702 85463701 85463763 62 TGTATGTGTATATATATGTGTATATATATGTATGTGTATATATATATGTATGTGTGTGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..::..:...x:.......x.:....:...::..........:..x......::.x...:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -1170228 -93060174 +3215 chr4 + 190214555 85463712 85463711 85463767 56 TATATATGTGTATATATATGTATGTGTATATATATATGTATGTGTGTGTGTGTGTA chr4 + 94230402 92759686 92759685 92759741 92759686 92759685 92759741 56 TACATTGGTGCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGTA ..:..xx...:.:..x.:..:......xx.x......:.................. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -7295974 -86934428 +3197 chr4 + 190214555 85463728 85463727 85463824 97 TATGTATGTGTATATATATATGTATGTGTGTGTGTGTGTATATATATATATATATA----TATATATATGGAGAGAGAGAGAGAGAGAGAGAG-------AGAGAGAG chr4 + 94230402 41749096 41749095 41749203 41749096 41749095 41749203 108 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAAAGAAGAAGAGACGAAGGAAGCAGTTGCAGAGAAAG ...:..x::::.:.....x:.x...:.xx..:....:....:....:...:..:..----.....x:...x.:...:::.....x::..::..-------.....:.. 56M4I33M7I8M 65/97 67.0% 108/94230402 0.0% 11/97 11.3% 43714632 NA +3156 chr4 + 190214555 85483614 85483613 85483683 70 AAAATAAATAAATAAATAAACAAACAAAAATAAAAAATATAAATAAATAAAAATTGTTTCATATGTTTTA chr4 + 94230402 56329946 56329945 56330015 56329946 56329945 56330015 70 AAAACAAATCAATAAATAACCTTAAAGAAATAAGAAGTAAAAATAAATGTGGTTTGCCTTATATAGTTTA ....:....x.........x.xx.x.:......:..:..x........:x::x...::.:....:x.... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 29153668 NA +3198 chr4 + 190214555 85485339 85485338 85485434 96 CTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAT--ATATATATATATATATATATATATATATATATCTCCTTGGATTTTTAAAATG chr4 + 94230402 22367299 22367298 22367396 22367299 22367298 22367396 98 CTCCAGCAGAAAAAAAAAAAAAAAATAGAAACAGAAAAGTATTTTCAAGTGTATAAATATTCATTTTCAAATAGATATTTACAACAATTTTATAAATG .....x.xx................x.:...x.:....:...x.--.x:.:....x....x:..x.x:.x...x....:.x.xxx:.....xx..... 44M2I52M 68/96 70.8% 98/94230402 0.0% 2/96 2.1% 63118040 NA +3471 chr4 + 190214555 85485346 85485345 85485407 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:......x........:.:..:...:.....x....::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 83990352 NA +3068 chr4 + 190214555 85485350 85485349 85485405 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 83990350 NA +3121 chr4 + 190214555 85485352 85485351 85485405 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -4544724 -89685678 +3014 chr4 + 190214555 85485354 85485353 85485412 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 34012864 NA +3496 chr4 + 190214555 85485354 85485353 85485409 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 83990354 NA +3282 chr4 + 190214555 85485356 85485355 85485411 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 83990356 NA +3174 chr4 + 190214555 85485359 85485358 85485412 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -63061 -94167341 +4099 chr4 + 190214555 85485361 85485360 85485524 164 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATC-TCCTTGGATTTTTAAAATGTAGGCTTTCAGTAGGTATATATATTAACTGTATGTTTCAAAAGGTCCTCCTTTATTTTTTGTTTAAATAAATGCTATGGTTGGAGAAAAG chr4 + 94230402 85548420 85548419 85548555 85548420 85548419 85548555 136 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCA----------TTTTAGTTGTTGTA-----AAACTTCTTGTTTCAAAAAGC---------TATTTTGTACAGGTAAATGCCA-----GAAGGAAAG .............:.:x.....:...:.:.:.::...:..........x......-xx.x.....x.::.----------...:...x.x.:..-----x....x:x..........:.:---------.x......x:.::.......:.-----.:..:.... 55M1I14M10D14M5D21M9D22M5D9M 100/135 74.1% 136/94230402 0.0% 30/135 22.2% -63059 -94167343 +3114 chr4 + 190214555 85485374 85485373 85485420 47 AAAATATATATATATATATATATATATATATATATATATATCTCCTT chr4 + 94230402 82013243 82013242 82013289 82013243 82013242 82013289 47 AAAATTTGTATATGTATGCATATATGCATGTATACATATATCTCCTT .....x.:.....:...::......::..:....:............ 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 3472131 NA +3816 chr4 + 190214555 85487667 85487666 85487793 127 AACATATATTTATTATAT-TATATAAATAT--ATATTTA------------TTATATTATATAAATATA-TATTTATATTATATATTATATAATATATATTTATTATATATTATATAATATATATTTATTATATATTATATAA chr4 + 94230402 26320201 26320200 26320342 26320201 26320200 26320342 142 AAAATAT-TTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAA ..x....-...x......-...x:....:.--.......------------....x.:.:..:x.....-..:x...xx......:......xx.............:...:xx...:.....x....x...xxxx...:... 7M1D10M1I11M2I7M12I18M1I73M 97/126 77.0% 142/94230402 0.0% 17/126 13.5% 59167466 NA +4510 chr4 + 190214555 85487677 85487676 85487906 230 TATTATATTATATAAATATATATTTATTATATTATATAAATATATATTTATATTATATATTATATAATATATATTTATTATATATTATATAATATATATTTATTATATATTATATAAATATATATTTATTACATATTATATAAACATATTTATTACATATTATATAAATATATA--TTTATTATATATATTAT-ATAAATATATAATATATATAATAAATATATTTTATATAT chr4 + 94230402 73633765 73633764 73633969 73633765 73633764 73633969 205 TATCACATTGTAGAGATATAAG---ACAACATCAAATAT-TAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATA--------AAGTATCTGttt------tataatacaaa-----ttattaaatattatttCACGTTATAATGTTATGATATACATGGTAATTAACATTTGAC-----TTAGAAATATTTTTTCTCTAT ...:.:...:..x.:.....x:---.:x.:..:.x...x-..x.:x....x...:..:x........:..x..:x.......:.x......x.......x.x:....--------..:...x.:...------...x...:...-----......x.......x.x.xxx....--x....x.....:..x:.-..x..:..x.:.:-----.x.x......x....x.x... 22M3D14M1D67M8D12M6D11M5D25M2I17M1I13M5D21M 146/202 72.3% 205/94230402 0.0% 31/202 15.3% 11853912 NA +3066 chr4 + 190214555 85491978 85491977 85492047 70 TCTCTAACCACTTTTTTGTCTTTTGTCTTTCTTCCATTTTGGTTCTTTTTATTTCCTCTCTCTCTTCCTC chr4 + 94230402 44858089 44858088 44858158 44858089 44858088 44858158 70 TCTGTTACCACTTTTGTGTCTTTTGTTATACTGTCATTTAGGCTTGTATCAGTTTCTTTTCTTCTTCCCC ...x.x.........x..........:x.x..x:.....x..:.:x.x.:.x..:..:.:::......:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 40633889 NA +3458 chr4 + 190214555 85510405 85510404 85510499 95 ACTCCCCTTTCTTTCACTCCTTCTCTTTCCCTCTCTCTCCCTTTCTTTTTCTCCCTCT----------------CTCTACCCGTTTGCCTT-------CTTC-------CCTTCTTTTTCCTTCT chr4 + 94230402 72001424 72001423 72001548 72001424 72001423 72001548 125 ACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTGAAATACCCTCCCCATCTGCCTTTCATTTGCTTTTGTGAGATTTTTTTTTTCCTTTT ...x..:.::...::.....:.x.:...:::........::...:.........:...----------------.:..x...:.:......-------...:-------::..:.........:. 58M16I17M7I4M7I16M 70/95 73.7% 125/94230402 0.0% 30/95 31.6% 13508981 NA +3357 chr4 + 190214555 85539921 85539920 85539987 67 TGTAGTCCCAGCAACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.....x.....::........x.xx.x...x.:...........:..x:xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 9506710 NA +3260 chr4 + 190214555 85570295 85570294 85570391 97 TTCCCTTGCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCT--TTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ....:..::..x.:x...--..x.......xx.:.:..:.:.:.:.:....x...xx..:.x..::.x:x.:.....x.....::..::.:...... 18M2D77M 62/95 65.3% 95/94230402 0.0% 2/95 2.1% 2243361 NA +3527 chr4 + 190214555 85570303 85570302 85570428 126 CTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTTCCTCTCTCTCT chr4 + 94230402 71957364 71957363 71957485 71957364 71957363 71957485 122 CTCTTTGTCTTTTTCCCTTTCTGTGTTTGTC-------CCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCT ....:.x...:....:......x.x.:.x..-------:::..:........xx..:x..x...:....xx::..xx:xx..:...xx:..x..:.---...::..:...:.:...:......:..... 31M7D58M3I30M 79/119 66.4% 122/94230402 0.0% 10/119 8.4% 13612939 NA +3256 chr4 + 190214555 85570316 85570315 85570414 99 TCTCTTTCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC ...x.........:......x:xx...:..x.:.:x:...:..x.:x.xxx...:x:.x:.x:.x.:x.:.::...x.....:..:...:......... 99M 63/99 63.6% 99/94230402 0.0% 0/99 0.0% 55039104 NA +3386 chr4 + 190214555 85586758 85586757 85586827 70 CATGGTGGCACGTTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::.:--.x......:............:........x.xx.x...x.:........::.:.. 12M2D56M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 9553561 NA +3122 chr4 + 190214555 85608528 85608527 85608568 41 ACTCAATGTTTTTTTGTTTGGTTGTTTTTTTTTTTTTTTTT chr4 + 94230402 6437109 6437108 6437149 6437109 6437108 6437149 41 ATTTAAGGTTTTTTTGGTTGGTTGTTTTTTTTTTTTTTTTT .:.:..x.........x........................ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 79171419 NA +3295 chr4 + 190214555 85669623 85669622 85669733 111 TGCATTGACCCTGTACTTTCAAATATATATATATATATATATATATATATATATATATATATATATATATGTGATATATATAGCTATATTACAAAC-TTCTATGTGAAGCAT chr4 + 94230402 53037254 53037253 53037351 53037254 53037253 53037351 98 TGCATTGACACTGATTTGGCAAATATTTATTTGTGCTCACATATATATATAAAGATATATATACAGAT--------------GCCAAGTCAGAAATGCTCGATGTGAAGCAT .........x...xx:.xx.......x...x.:.::x:.:...........x.x.........:.x..--------------..:.x:.:.x...:-:..x........... 68M14D14M1I15M 71/97 73.2% 98/94230402 0.0% 15/97 15.5% 32632369 NA +3329 chr4 + 190214555 85737096 85737095 85737150 55 ACAGCTGGTGAAAAAATAATGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGC chr4 + 94230402 66079343 66079342 66079397 66079343 66079342 66079397 55 ATAACTGATGAAAAATTGTTGGTTTTTCTGGTTGGTTTGTTTGTTTGTTTTTTAC .:.:...:.......x.:x.......x:.x...x...................:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 19657753 NA +3210 chr4 + 190214555 85742297 85742296 85742370 74 ACATGGAGAGCGGGAGAAAATGAGGGAGGACAGAAGAGAGGAGAAGGAGGAGGAAAATAAGAAAAGGAATACTA chr4 + 94230402 1500696 1500695 1500767 1500696 1500695 1500767 72 ATGTGGGGAAGAGAAGAAA--GGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATA .::...:..:x:.:.....--.:x..:..:x.....x....:.........::....:.:........:x.x.. 19M2D53M 51/72 70.8% 72/94230402 0.0% 2/72 2.8% 84241601 NA +3013 chr4 + 190214555 85743379 85743378 85743460 82 CGGGATCCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTGGGCATGTTAGTCCCAGCTGTTT chr4 + 94230402 11702787 11702786 11702868 11702787 11702786 11702868 82 CGGGGCCTCCTACCAAACAGGAAAATAGAAAGAGCAAAAAAAAAAAACAAAAAAACCCAAACCATAGGAGTTTCACTTGTTT ....::.:.x.x:....x.::....x.:...:.:x............x.......xx.x::x...:xx...::..x:..... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 74040592 NA +3030 chr4 + 190214555 85743382 85743381 85743443 62 GATCCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTGGGCAT chr4 + 94230402 3859061 3859060 3859122 3859061 3859060 3859122 62 GAGCACGTTTGAATTAAAACAAGAAGGAAGGGAAAAAAAAAAAAAAGAAAAAGGATGAGCAT ..x.x.:.:.x..xx....x..:..::..:::..............:.......x..:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 81884321 NA +3202 chr4 + 190214555 85785429 85785428 85785515 87 TTATATTTTATTTTGAGATAAAATCATCTCCTTGTTCTGTTT----TTGTTGTTGTTGTTGTTATTTTGTTTTGTTTTGTTTTTTTAAGAA chr4 + 94230402 28945637 28945636 28945723 28945637 28945636 28945723 87 TTCTATTTCACTTTAGGTT----TCATTGCCTTTTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTCTCCTAAAGA ..x.....:.:...::.x.----....:x....x..:...x.----.................x.x..xx........x..:.::...::. 19M4D19M4I45M 62/83 74.7% 87/94230402 0.0% 8/83 9.6% 56839792 NA +3148 chr4 + 190214555 85785456 85785455 85785508 53 CTCCTTGTTCTGTTTTTGTTGTTGTTGTTGTTATTTTGTTTTGTTTTGTTTTT chr4 + 94230402 23298692 23298691 23298744 23298692 23298691 23298744 53 CTTTTTTTACTTTTTTAGTTTTTGTTGTTGTTGTTTTGTTTTGTTCTCTTTTT ..::..x.x..x....x...x...........:............:.x..... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 62486764 NA +3099 chr4 + 190214555 85785468 85785467 85785540 73 TTTTTGTTGTTGTTGTTGTTATTTTGTTTTGTTTTGTTTTTTTAAGAAAGAGCAGCAAGAAAAGTAAAACAGA chr4 + 94230402 23574663 23574662 23574735 23574663 23574662 23574735 73 TTTTTGTTGTTCTTGTTGTTTATTTGTTTTGCTCTGTAGTTTTCAAAAAATAAAGGGAAAAACAAACAACAAA ...........x........xx.........:.:...xx....x.:...:x:x..x:.:...x:x.x....:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 62210805 NA +3722 chr4 + 190214555 85800504 85800503 85800599 96 GAGGAGGAAAAGGAGGAAGAAGAGGAGAGAGGGGGAAGGGAAGGAAG--AGGAAGAAGAAAAGGGAGAGAAGGAAAGGAGGAAGAGAAAGAAGAAAAA chr4 + 94230402 18344025 18344024 18344121 18344025 18344024 18344121 97 GGAGTGGAAAGGGAGGAGGAAGAGGAGAGAGGGAACAGGGAAGGAAAATAGCAAGTAGGAAATGG-GAGCCTCCAAGTGGAAAGAGGAGAAGGGTAAA .::.x.....:......:...............::x..........:--..x...x..:...x..-...xxxxx...x:.:.....:.::.:.:x... 47M2I16M1D32M 68/95 71.6% 97/94230402 0.0% 3/95 3.2% 67456479 NA +3374 chr4 + 190214555 85800506 85800505 85800586 81 GGAGGAAAAGGAGGAAGAAGAGGAGAGAGGGGGAAGGGAAGGAAGAGGAAGAAGAAAAGGGAGAGAAGGAAAGGAGGAAGA chr4 + 94230402 65503041 65503040 65503121 65503041 65503040 65503121 81 GGAGGAGAAAAAGGAAGAAAAAGATAAAGTGGATGGGGGAAGAACAAGCATGGGAAAAAGGCAAGAAGGGGCAAGGGGAGA ......:..::........:.:..x.:..x..:x:...:.:...x.:.x.x::.....:..x:......::x:::..:... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 20297465 NA +3456 chr4 + 190214555 85812036 85812035 85812118 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATTGCTTGAACTCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:.........::::........x.xx.x...x::.......:.:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 9778839 NA +3307 chr4 + 190214555 85823828 85823827 85823898 71 TTCTTCCCTAGCTCCCTCCCTTCCC----TCCCCTCCCCTCCCCTCCCCTTTCTTCCCTTTCTTTCTTCTTTTTC chr4 + 94230402 53757784 53757783 53757858 53757784 53757783 53757858 75 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTC ....:::.:.x..:::..x.:..::----:....:....:....::..:...:..:.....:......:...... 25M4I46M 49/71 69.0% 75/94230402 0.0% 4/71 5.6% 32066044 NA +3211 chr4 + 190214555 85827479 85827478 85827530 52 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGAGAGAGAGA chr4 + 94230402 87420509 87420508 87420560 87420509 87420508 87420560 52 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGA .:...........:.:........:.x:x.x.....:.:.x........... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -1593030 -92637372 +3209 chr4 + 190214555 85838459 85838458 85838528 70 CATGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......x:..--......:...........::........x.xx.x...xx::x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 9805262 NA +3388 chr4 + 190214555 85853814 85853813 85853883 70 CATAGTGGCACACACCTGTAGTGCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....::...:--......x.........::::........x.xx.x...x..........::.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 9820617 NA +3143 chr4 + 190214555 85867873 85867872 85867925 53 TAAACATATATAATGTGTGTGTGTACATATATATATACATATATGTACACACA chr4 + 94230402 55049666 55049665 55049718 55049666 55049665 55049718 53 TAGGCATGTATAACGTATGTGTGTTCACATATATATACACCCATGTGTATACA ..::...:.....:..:.......x..:...........:x:....::.:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 30818207 NA +4577 chr4 + 190214555 85875484 85875483 85875687 204 ATATTATATTATATATAATATATATTATAATATTATATTGTATATAATATATATTATTTATATTTTATATTATATTTTTATATTATATAATATATAATATATATTTTATATTATATTTTTATATTAT-ATATATGTAATGTATATATAATATAAATATATATTTATATTATATATAATATAACATAAAATTTATATATAAATATT chr4 + 94230402 73633764 73633763 73633959 73633764 73633763 73633959 196 ATATCACATTGTAGAGA--------TATAAGACAACATCAAATATTAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaattat-taaatattatttCACGTTATAATGTTATGATATACATGGTAATTAACATTTGACTTAGAAATATT ....:.:...:..x.x.--------.....x.:x.:..::x....x.x.:x.x.x.x..:..:.......x.:..:.x:........:........x.......x..x...x.x:.x.:.:.x....-...:.x:.x..-..x....x..x.x.xxx....x.xx...x.....:.xx:...:xx.x.x..x.:x..x....... 17M8D102M1I11M1D65M 130/195 66.7% 196/94230402 0.0% 10/195 5.1% 12241720 NA +3029 chr4 + 190214555 85888377 85888376 85888423 47 GCAACAGAGCAAGACTTCCTCTCAAGAAAAAAAAAAAAAAAAGAAAG chr4 + 94230402 88382708 88382707 88382754 88382708 88382707 88382754 47 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAG ....x:.........xx........:..::.:..........:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -2494331 -91736071 +3255 chr4 + 190214555 85894915 85894914 85895002 88 CATACCACTGTACTCTAGCCTGGGCAACAGAATGAGACTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCA chr4 + 94230402 18047909 18047908 18047994 18047909 18047908 18047994 86 CAAAACACTCTGCCTTAA--TGATGAACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCA ..x.x....x.:.::..:--..:xx.......::.xx..:::...:............x........xx:..:..:.x.x........ 18M2D68M 60/86 69.8% 86/94230402 0.0% 2/86 2.3% 67847006 NA +3100 chr4 + 190214555 85894949 85894948 85895020 72 AGACTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAA chr4 + 94230402 31499678 31499677 31499749 31499678 31499677 31499749 72 AAATTTCTTTTAAACAAAGAGAGGAAAAAAATGGAGAAGTAAAGGCAAAAAGCAAACAAACAAACAAAAAAA .:.:.:.:.:.x..x...:.:.::.......x::.:..:xx..::...........x...x...x....... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 54395271 NA +3031 chr4 + 190214555 85894962 85894961 85895041 80 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCAGGATTTT chr4 + 94230402 49206622 49206621 49206701 49206622 49206621 49206701 80 AAGAAAAAAAAAAAAAACACACAAAAGCAAACAACCAAACAACGACAACAAAAGAACAGGGTAAATAAAAGGAAGTTATT ..:..............x.x.x....:....xx.xx..:...x:.x..x....:..x.::.x...x.....x.:.x.x.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 36688340 NA +3025 chr4 + 190214555 85894975 85894974 85895042 68 AAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCAGGATTTTG chr4 + 94230402 29891622 29891621 29891689 29891622 29891621 29891689 68 AAAGAGGGATAAAAGAATGCAAAAGATTTAAAGGAAAAAGTAAAAAAAAAAAGAAAAGCAAAATTATG ...:.:::.x....x..x:.....:::xx...::.....:x......:............::...x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 56003353 NA +3067 chr4 + 190214555 85894976 85894975 85895020 45 AAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAA chr4 + 94230402 52156296 52156295 52156340 52156296 52156295 52156340 45 AAAAAAAACAAACCAAAACAAAAAGCAAACAAAGAAAACAGAAAA ........x...x................x...:....x.:.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 33738680 NA +3054 chr4 + 190214555 85897974 85897973 85898059 86 CTCTAATACACACATATATATATATATATACACATATATATATACACACACATATATGTGTATATATATATATATATATATATATA chr4 + 94230402 76376853 76376852 76376938 76376853 76376852 76376938 86 CTGTCATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ..x.x..:..:..x.x.x..:....::.x.x.:.:..:...::.:...x.xx..:x........:....:.::.....x.:.x... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 9521121 NA +3052 chr4 + 190214555 85897979 85897978 85898067 89 ATACACACATATATATATATATATACACATATATATATACACACACATATATGTGTATATATATATATATATATATATATAATTATTTT chr4 + 94230402 29286192 29286191 29286280 29286192 29286191 29286280 89 ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTT ...:...:.:.:::.x.x::.......x...x.x.x.....xx.x..:.x..:.:..:....x.:...x...x....::..x:...x.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 56611787 NA +3084 chr4 + 190214555 85897984 85897983 85898060 77 CACATATAT-ATATATATATACACATATATATATACACACACATATATGTGTATATATATATATATATATATATATAA chr4 + 94230402 46063289 46063288 46063366 46063289 46063288 46063366 78 CACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAA .....x..:-...:..:.:....::.:...:x::...:::x...:.....x......:......:xxx.......:.. 9M1I68M 53/77 68.8% 78/94230402 0.0% 1/77 1.3% 39834695 NA +3021 chr4 + 190214555 85901362 85901361 85901397 36 CAAGAGGGAAAACAAACAAACAAACAACAAAAAAAA chr4 + 94230402 21578416 21578415 21578451 21578416 21578415 21578451 36 CAAGATGAAAAACAAACAAACAAACAACAAAAAAAA .....x.:............................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 64322946 NA +3003 chr4 + 190214555 85950625 85950624 85950705 81 TTTTTCTTTTTCTTTTTCTTTTACTTTTATTTTTTCTTTTTCTTCTTTTTTCTTTTTTCTTTTTTTTTTAAGAGTCTCCCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ..:..:...x.:.x:.:x...:.::.x.:....:.:..x:..x..:x........:..:..:.......xxx.:...::.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 61974124 NA +8502 chr4 + 190214555 86012866 86012865 86013288 423 TTTAAGTCCAT-TTTATAAACACTGACACAAGACAATTCTCATCATTGGTAATAGTCTTTGGAGTCCAATCATGCAGAAAAACAGGCAGGTGCAAGTTAGGTCTCATTGCAAGATGGACATGGCAAGGTGAACAGATAATCC-TACATAAGGATTGGGAGATTTGTGTC--------CATTAGAATATACTGGCCATTGGTCCCACATAAGTAAAGT--TACATATACAAGATTCTATATATAAACAGAG---------GCCCCTCACTTCAG--TTTGGCTGACCAAAGAAACAGGTCA-AAGTGAGCCATTTTCAGATAGTTAAAGGACTAAGTACCAAAAGAAATAACAAAATC----------TTATCCTCTAATCACAAAGAAAATA--GCTAAAATAACTATTTACATTGCAACTTTTTTGTTGTTTTTACAGAGAGGAGTTTCCTTGCTTGG chr4 + 94230402 47388450 47388449 47388899 47388450 47388449 47388899 450 tttAAAACTATGTTTATCAACACCGATACATTACAGACCGTGT---TGGTTATA--CTCCAAAGTCTGATCATGCAGAACTACAGGCAGGTGCAGCTTAGGTCTTGCTACAGGACAGACATGGCAAGGTGAACAGTTGGTTTGCTCATTAAGATCTGGAGCTCTGTTACTGTTGTGGCTTTAACGCATACTGGCCAGAAGTCCCACTTACTCCATTTACTAACTATACATGTTTCTATATGTACACTGAACCCTCCAGCACCCTCCTTTGCAGCATGTGGCTGACCAGGGAA--AGCTCAGAGGTCAACCGTGTTGAGGCATACAGTGGCCTTATTG-TAAAAGATCAAACAGAAGTTGTGTGTTGATTACATATTAGTTACAGAAGAAAAAATGTCCATACAACTATATACATCATGAATACCTTGCT-TTCCAGAAGACAGGAATGGCCCCGTTCAG .....:x.:..-.....x.....:..:...xx...:x:.x::.---....x...--..::::....::...........xx.............:x........:::.:..:..::...................x.::.::-:x...x.:...:x....x.:...xx.--------.x...:x::..........xx:.......x..xx:x.xx.--..xx......x.x........:..x..x..:---------:...::.x:.x...--.x..........::...--..x...-.:..x.:..:.x..x..::.xx:.:x..x..x.x.:-:......xxx....:..x:----------...:x:x:..:.:...:.::...x.--.::x.x.:......x.....::::.x.x::...:.-..::x:x...x....:.xx..::.:.::. 11M1I31M3D8M2D86M1I26M8I40M2I31M9I14M2I17M2D6M1I36M1D19M10I25M2I35M1D29M 270/414 65.2% 450/94230402 0.0% 45/414 10.9% 38624416 NA +27227 chr4 + 190214555 86016507 86016506 86017413 907 AAATTTGGAAGCTACATCTTCAAGGGTCTGAGAGAGC------TCACTCCCCCCATATATTCCCCCTTTACATGTTTTCTTATAAGACATACAGTTTAATCAATTAACAAACTAAACAGCTTATATACTGGCAATATATTACAGATGGGTTTATGTCAGAGTAATAGATCACATGAAATGGACCATGTGGTACCCCAGTGCATTATGTCTTGGTAGAGCC------------------------CTGAGGACACTGACAGTAGCATCTCTAAGTAAGTAGTGCTGTATGAATA---CAGACACATGCGGATCTGTATCTACATCCATCTGACTAGG--------------CCAAGGAGCAGGTAGAT------GCAAGATAGAGACACACACATGCTGG------ATGGGGC--CACTGCACACCTTGTCATGCCATT-TAAAAGGGCAGTTACAGGTTGCCGGTTTTGCAGCCATTAAAATTACACTTTAT------GGAAAAGGCTTCTCTAATTGTGTCTGA-------TTTGCTTTCTGTA-----GTAAGCATCATTGGAAGAAGACCAAAGCAAGAGCAACTAGAAGTTAAATATACATTTGAGCTTAGCTGCAATACAGAACCCTGGGGAAGAAGCAGGCTGAAAGA-----TTTATTTAATTTTAGGCT-TGGATTCTCTCCCTTGCTGTTTTCTTGATGTTGTGTGTCTGCATTTGTGTGTGTGTGTGTGTCTGCGTGTGTGTGTGTTCCATCACATCATCTCCTGAAGAACGCTGGGTTTCGCAGGCAGGCGGCTAGTCACCTGCAACAACCCAGGGGTCCTGCCGAGGCTTCCAGGCTGCTGTCAGTGTCAGATGCCAGGGTCTGGTCGGTGGACATGGAGGAGATGTCATTGACAGACGAGGATGGAGGGAGACTCTCACTGCTGTTCACTGCTGCACCTGTGCTAAGAAAATGAAGACCAACATGACTCAATCTAGAACC chr4 + 94230402 47393188 47393187 47394116 47393188 47393187 47394116 929 AAACGTTGGTGCTACATCTTCAAGGGTCTGAGGGAGCCACAGCTCAGTGTGGTTAT---TTTCACTTCCACAAATAATTGCACAAGCTGTGCAGCCTCATCCATGACCAAG-GACACGACATATACATGGGTAACAG--CACCCATGTATGTATGCT---------GCTCACCTGAAATGGGCCATGTAGTTGTGTGGTGCACTGAGTATGTGTGCAGACTGACGAGTTCCTATAGGCACACAGCTGCACACACAGCCATTGGCGTGTGTGTGT-----GCTCTGCATGCATGGGGAAAAAACGTGTGTATCCCTATCTGTATATCCCTAACTGTATATCTATCCCTGCCCCAGGGAGCAGG-AGACAACAGAGCAGAGTGAGGGCAGATCCGCACTGGTGTGTTGTGGAGTGGCACTGCGCACCTTGTCATGCCAGCGTGAGAGGACAGCTGTGGGTCGCTGGTTTTGCAGCCATTAATTTTGCATCTTGTAAGGGGGGAAAAA--------AAAAGGATCTGAAGAATCCTTTTCCTCCCCCACCCCAGAAAGCATCATCGTAAGAAGACCAAAGCA-GAGCAACTATGAGTTACATACACACTGGAGCTGAGCTGCATTACATAGCTCTGTAGGAGAAGCAGGCGGAAAAGATTTGTTTGTTTCGTTTAAATCTGTGCATTTTATTTCCCTCCGTCC-CTTAGCTCTGTTGCTTTCCCTCTGGACGC---------------------------------CGTCACCCCCTGAAGAAGGCGGGGTTCCGCAGGCAGGCGGCTAGTCACCTGCAGCACCCCAGTGGCCCCGCCGATGCTTCCAGGCTGCTGTCCGTGTCGGACGCCAGCGTCTGATCCGTGGACATGGAGGAGATGTCGTTGGCCGATGAGGATGGGGGGAGGCTCTCGCTGCTGTTCACTGCTGCACCTGTGCTACGAAAATGAACACCACCGTGATTCAACCCGAAACC ...:x.x.:x......................:....------...x.x:xx::..---..:.x.:.::...x:.xx.:x:.:...x::.:...::.x...x..x.x...:-x.x..::.x....:.:x..:..:.x--:..xx...x:.x....::---------.x....x........:......:..xx:x::.....:.:x..x.xx..:x..x.------------------------...x:x....x.x..x.:..:.x.x.:x..-----.:x...:...x..:---x.:.x..:..:.x...:x.....::..x:x:..:...:x:--------------...:........-...:------...:::.:::.:..x.:x.:::....------:...:.:--......:...............x:-.:.:...:...:.:::...:..:.................xx..:..::..:.------......:--------..xx.x:.....-------...x.:.:.:x:.-----.x.........:.x...............-.........x:.....x...:...:.x.....x.......x....x.:.:...x:.:..........x....::-----...:...x:...x.:x..-..x...:.x.::.::x.:..::-...:::x:...xxx.:.x.x.:..x::.:---------------------------------.:...:.:.........x..x.....:..........................:..x.....x..:..:.....x.................x.....:..:.....x.....:..x....................:...:.x..:........:.....:.....:...........................x.........x....x.:...:....:.:::.... 37M6I13M3D52M1D25M2D18M9D54M24I30M5D14M3I40M14I12M1D4M6I26M6I7M2I24M1I53M6I7M8D12M7I13M5I29M1D74M5I18M1I22M1D29M33D230M 599/843 71.1% 929/94230402 0.0% 150/843 17.8% 38623319 NA +7963 chr4 + 190214555 86029177 86029176 86029306 130 TATTCACGGAGAGTGAGTACCTGAAGGAGAAGGCTGTCCTTTTACTACACCATTTTTAGTCTTTTCTTCTGAATTCATTACTTCCTTGTAGATAAGTTCTGTAAGAAACAGCTGT--GTTATTATAGAAAAC chr4 + 94230402 47394972 47394971 47395103 47394972 47394971 47395103 132 TATTCACTGGGGCTGAGTACCTGAAGGAGATGGCTGTCCTTTTACTACGCCATTTTTCGTCTTTTCTTCAGAATTCATTACTTCTTTGTAGATGAGTTCTGGAACCAAGAATTGCAAGTTACAAACAAAAAC .......x.:.:x.................x.................:........x...........x..............:........:.......x..xx..x.::..:--....:x.xx:..... 115M2I15M 108/130 83.1% 132/94230402 0.0% 2/130 1.5% 38634205 NA +4775 chr4 + 190214555 86051203 86051202 86051351 149 ATTAGAAAGGGACATAATAATTTTATTATAGCACATACTCCTGGAAAGACCATAAACTTTTAATAGACTTGTAAAAAGGGAGTGTAACCTTTTCAATATTCTGTCTCATCTATTCTACCTTCTCCTCACATATAACGAATGCCCTAGGG chr4 + 94230402 9128614 9128613 9128753 9128614 9128613 9128753 140 ATGAGAATGGGATACCGTAATTTTAATGCCCAGTATAGTCTGCGAAAGACTATAAACATTTAATAGACCCATAAACACAGGCTTTAACCTTTTCAATATTTGG---CACCTGACCAACCTCCACCGCAC------CGTGTCCCCCAGGG ..x....x....:.:x:........x.::xxx::...x..:xx.......:......x..........:::....x.x:.:x.x................:x.---..:..:x:.x....:.x..x...------..x:.x...:.... 103M3D23M6D14M 97/140 69.3% 140/94230402 0.0% 9/140 6.4% 76922589 NA +9101 chr4 + 190214555 86064261 86064260 86064398 138 CTTACCGCCTCCACTTCGGCTGGGTCATACCAGACGTTGATGTAGGGATGCTGTAAGGCGTCGTCCACTGATATTCTTTTTGCTGGGTCAATCACTAGCATCTTTGACAACAAGTCCCTGGCTTGGCTGGCTGAAACA chr4 + 94230402 47396992 47396991 47397129 47396992 47396991 47397129 138 CTCACCGCCTCCACCTCGGCAGGGTCGTACCAGACGTTGATGTATGGGTGCTGCAGGGCCTCGTCCACCGATATGCGCTTGGCTGGATCGATGACCAGCATTTTGGACAGCAGGTCCCGAGCTTGGCTGGCTGCAGCA ..:...........:.....x.....:.................x..:.....:.:...x........:.....x.x:..x.....:..:..x..:.....:..x....:..:.....x:.............x.:.. 138M 112/138 81.2% 138/94230402 0.0% 0/138 0.0% 38667269 NA +13885 chr4 + 190214555 86067768 86067767 86068006 239 CATACCTTTGAGTTTATTGTGCTCGGAGTCCGCTGGGAAGAGGGAATCTGGGAAGAGTTTGGGGAAGGTGAGTCCCGCATACTTGGGCCGATTCTCCACATAGTTTCTTACTGTGGGTTGCAATTTCTTCATGAATTCTGGACATGGTGTTCCTAGTTGTTCAATTACCTTATTCCACTGGTCAATATCTGAGAATTGAACAGTTAAGGGAA----AAAAGAAGAGCAGACCACTAGCCTTTC chr4 + 94230402 47398294 47398293 47398535 47398294 47398293 47398535 242 CGTACCTTTGAGTTTGTTGTGTTCTGAGTCAGCTGGGAAGAGAGAATCAGGAAACAGTTTGGGGAAGGTGAGGCCAGCGTACTTAGGCCGGTTCTCCACGTAGTTCCGCACCGTTGGCTGCAGCTTCTTCATGAACTCTGGGCAGGGTGTTCCCAACTGCTCTATGACTTTATTCCACTGGTCAATATCTGGACATTGGG-AGTTAAGGAAAATCCAACACAAGCCCCAAACCCCAACCTTTC .:.............:.....:..x.....x...........:.....x..:..x.................x..x..:.....:.....:........:.....:.x:..:..x..:....::...........:.....:..x........:.::..:..x..x..:......................::x....::-........:..----..x.x...xx.x:.x.x.:.:...... 200M1D11M4I27M 189/238 79.4% 242/94230402 0.0% 5/238 2.1% 38669474 NA +12014 chr4 + 190214555 86089128 86089127 86089340 213 AGCAGTACTGCATTTGAGACAAAAGGGAATTAATTGAGAGTGACACCCATAGATACCACTGGCTGCTAAGAAGGATACGATCAGTGCCAGGAAACAGCACTGCACCTTTTATCATTTCTCCCATGATGCACCCTACTGACCACATGTCAACTGAAAACAAAAATGAAATGAAGATAAACAAGAACACAGGAATAGAACAACAAATAAATGAAA chr4 + 94230402 47405061 47405060 47405268 47405061 47405060 47405268 208 AGCAGCCCTGTGTGTGGGACTGGAGGGGAAGGGTTGGGTG-----CCCACTAAGCCAAGCTGCCGTGAGGAAGGATACGATCGGTGCCAGGAAACAACACTGCACCTTTAACCATTTCGCCCATGATGCACCCTACTGACCACATGTCGACTGAAAACAGAAATGAAATGGAGGTAAACAAGCAAACAGGAACACAACAACAAATCAATGAGA .....:x...::.x..:...x::....:.xx::...:.x.-----....:x:.xx.x.x:x..:.:x.:.............:.............:............x.:......x.............................:..........:..........:..:........x.x.......:.x..........x.....:. 40M5D168M 164/208 78.8% 208/94230402 0.0% 5/208 2.4% 38684067 NA +3333 chr4 + 190214555 86091515 86091514 86091568 54 CTTTCAGGCTAAAATCCCTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCT chr4 + 94230402 59451498 59451497 59451551 59451498 59451497 59451551 54 CTGTCAGATTCAAATTCCTTGATTTTTTTTTCTTAGTATTTTTTTTCTTTTGCT ..x....::.x....:...............:..xx.x........:....... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 26640017 NA +14804 chr4 + 190214555 86098423 86098422 86098696 274 AACTTTTTGCTTCTATCTTTACTCTCCTGGTAAAATCATTATGTGTTTAAAAGGGAGAG---------AGAACAAA--ACAGGTAAAGCTGTAGCAAAAGGTACAAGGATACAGTCCCTTCCTGGAAAGAGGATTTTGTGGCGAACCATTTCTCCCATAATGCATCCCACAGACCATATATCCACTAGAACAGGAGAGAGAGGGTAGTGAAGAAAAGGGAGGAAAGTAAAGTTAACTAAGATAATTGACTTCTGAAGGAGGAGGAAAAAGAACAGTTTGATTAAA chr4 + 94230402 47410136 47410135 47410419 47410136 47410135 47410419 284 AATTTCTTGCTTCTATCTTTGTAATCCTGGTACATTTGTTACACAGCAAAGGGGGTGGGTGGAGGAGAGGAACAAATGATGGGTGAAGCTGCAGCACATGGCACAAGGATACAATCCCTTCCTGGAAAGAGGATTTTGTGGCGAACCATTTCTCCCATAATGCATCCCACAGACCATATATCCACTAGGACAGCAGAGACAGGAGGTGGAGAAGGAGGAAAAAAAGCAAAGTTAACCATGACATTTCACTTCTAAAGCAGG-GGACAAAGAGCAGGGTGAGCAGA ..:..:..............::xx........x.x.::...::::x:x..::...x.:.---------:.......--.::...:......:....x.x..:...........:..........................................................................:....x.....x...:x:xx..::.::...:.::....:.........:.x..:.x..x......:...x...-...x.....:...xx...x:.:. 59M9I8M2I183M1D23M 213/273 78.0% 284/94230402 0.0% 12/273 4.4% 38688287 NA +13752 chr4 + 190214555 86101042 86101041 86101251 210 GCATCCCTACCGTTCTCCTTGTAGCCCATCCCCAGGATGACCTCAGGGGCTCTGTAATAACGTGTCACCACATATGGAGTCATCATGAAGCTTGTGCCTGCTGTCCTGGCCAGTCCAAAGTCCAGGATTTTCAATGTGCAATCAGACTTGACTACAATGTTACTTGGTTTTAAATCCT----AACAGTAAGGATAAGGGAAAAAATTA---AAAGCC chr4 + 94230402 47412964 47412963 47413180 47412964 47412963 47413180 217 GCAGCCCTACCGTTCTCCTTGTAGCCCATTCCCAGGATGACCTCCGGTGCTCTGTAGTACCGTGTCACCACGTACGGAGTCATCATGAAGCTGGTGCCCGCAGTCCTGGCCAGCCCAAAATCCAATATCTTCAGCGTGCAGTCAGATTTTACCACAATGTTACTTGGTTTTAAATCCTGCAAAAGATTATGAAAGAGTGAAAAGAGTGCATAAAGCC ...x.........................:..............x..x........:..x...........:..:.................x.....:..x...........:.....:....:x..:....::.....:.....:..x..:.........................----..x.x..x.:.x:..x.....:.x.:---...... 178M4I26M3I6M 178/210 84.8% 217/94230402 0.0% 7/210 3.3% 38688078 NA +11311 chr4 + 190214555 86101884 86101883 86102040 157 GTGTTCTTACCCTGTGAATAATTCCAGCAGAATGGAGGTGCTTAATGCCACACAACATTTGGTACAGCAGGTAAGACATTCGCTCATGGTCTAATTCCATCTGAATCACTTGACATAAGTTGGCATCCATCAGTTCCATTACTAAGTAACTAGAAGG chr4 + 94230402 47414147 47414146 47414303 47414147 47414146 47414303 157 GTCTCCTTACCCTGTGAATAATTCCCGCAGAGTGCAGGTGTTTGATGCCGCAGAGCATTTGGTACAGCAGGTAGGACATTCGTTCATGGTCTAGCTCCATCTGAATCACCTGGCACAGGTTGGCATCCATCAGCTCCATCACCAGGTAACTGAATGG ..x.:....................x.....:..x.....:..:.....:..x.:..................:........:..........::..............:..:..:.:...............:.....:..:.:......::.x.. 157M 132/157 84.1% 157/94230402 0.0% 0/157 0.0% 38687737 NA +6756 chr4 + 190214555 86103176 86103175 86103296 121 TGTTACTTACACATCTTGGAACTCCTCCAGCGTTTTCTGGGGTGTGAAGACATTTAATAAACTAATAATCTGAAAGAGAGTGGAAGGGACAGAGGAAACGAGAGAAAGAAAAAAGAGAGAG chr4 + 94230402 47415421 47415420 47415539 47415421 47415420 47415539 119 TACTACTTACACATCCTGGAACTCCTCCAGAGATTTCTGTGGTGTGAAGACATTTAATAAACTGATAATCTGAAAGACAGATCAA--AACAAAAGGAAGAAGAGAAGTGATAAAGGTAAAG .::............:..............x.x......x.......................:.............x..xxx..--:...:.:.:..x:......:x:.x....:x.:.. 85M2D34M 95/119 79.8% 119/94230402 0.0% 2/119 1.7% 38687755 NA +10739 chr4 + 190214555 86107212 86107211 86107357 146 ACAAAACTCACGTTTTTATGGTTCACACACTTCATGAGGACCAGCTCCCGGTACGCTCTCTTGGCATGTGTTTGGTTCTGAAAGGGTCTGCTGAGCTTCTTAATGGCCACATTTCTGTCAAGGACAGCATCATACGCGGCACTGTA chr4 + 94230402 47416763 47416762 47416908 47416763 47416762 47416908 146 ATAAAACTTACATTTTTGTGATTCACACACTTCATGAGGACCAGCTCTCTGTAAGCACGCTTGGCATGGGTTTGGTTCTGGAATGGTCTGCTGAGCTTCTTAATGGCCACGTTTCTATCAAGGATGGCATCGTATGCAGCACTGCA .:......:..:.....:..:..........................:.x...x..x.x.........x...........:..x..........................:.....:.......::.....:..:..:......:. 146M 125/146 85.6% 146/94230402 0.0% 0/146 0.0% 38690449 NA +14760 chr4 + 190214555 86159233 86159232 86159486 254 GTTTGTGTCTAGTAGT-----------TGCACACGGTGTGTTCCCTTTAAAAATACAGCAAATCCATT-CCGCTTACCAAACTATGCCCTGAGCCCCAGAGCCAATAGGCTTTAGATTCTGGTAGCGCTTGAGAACTGTGAAGGTTGAGTCTCCCACTTCCACACTGTAGAACTGGTTGTCAACTTTGCTTTTGCTCATGTTGTAATGTTTGGCAATATATGACACATCCACTTGTTTATCGAATCCCTGTCAAAAAGAAGAACAG chr4 + 94230402 47419280 47419279 47419545 47419280 47419279 47419545 266 GTCTGTGACTAGCAATCTGTGAAGAAATGCAAAAGGCAAATCCTACTGAAAAGCAAAGAGAAAGTGCTGATACTCACCAAACTATTCCCTGAGCCCCAGAGCCAATTGGTTTCAAGTTCTGGTAGCGCTTGAGAACAGTGAAGGTCGAGTCACCCACTTCCACGCTGTAGAACTGGTTGTCAACTTTGCTTTTGCTCATGTTGTAATGCTTGGCAATGTATGACACATCCACTTGTTTCCCAAATCCCTGTTGTGCAGAAGGGAAG ..:....x....:.:.-----------....x.x..::x:.:.:x:.x....::.x..x:..xx:::.-x::..:..........x....................x..:..:.::....................x........:.....x...........:............................................:........:....................x:.:.........::x:x.....::x.. 16M11I41M1I197M 202/254 79.5% 266/94230402 0.0% 12/254 4.7% 38739953 NA +3512 chr4 + 190214555 86179062 86179061 86179144 83 CATGGTGGTCAGCACCTGTAGTCCCAGCTACTTGGGATACTGAGGCAGGAGAATCACTTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--....x......:...........::.x:.....x.xx.x...x..........::.:.:x.xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 10145865 NA +9490 chr4 + 190214555 86194274 86194273 86194438 165 ATGTCAAAGTGGAAATACAAGGGAATATACTGTACCTTGTTTTACCTGTAAGGAACACACACCTGACAAAAGGCAATTTTCACATCCAATGTTGGTTCACTGCAGTAGTATAAGAAATGGAGGCTCATAAATACCTA-GAGGAAAAAGAAATGGAGCATAAATTTT chr4 + 94230402 47430774 47430773 47430936 47430774 47430773 47430936 163 ATGTAAAAATA-AAGTACAAGTG--TGTACTGTACCTTGTTTTACCTGTAAGGAACACACACCTGACAAAAGGCAATCTTCACATCCAGGGTAGGTTCACCACAATAGTACAACAAATGGCGGCTCATAAATACCTACAATTAAAAAGAAAATAAAAATAGACATT ....x...:.:-..:......x.--.:..................................................:..........:x..x.......::..:.....:..x......x................-:.xx.........xx:.:x...:.:x.. 11M1D11M2D112M1I28M 135/162 83.3% 163/94230402 0.0% 4/162 2.5% 38763500 NA +3371 chr4 + 190214555 86215726 86215725 86215804 79 GTGGTGCTCACCTGTAGTCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--..x......:.........::::......:.x.xx.x...x.:.........:.:..x:xx:..:..:.. 7M2D70M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 10182525 NA +3007 chr4 + 190214555 86221148 86221147 86221206 59 GTGTGAAGCTAGAAAGACAAAATGGAGAAGTGATAACAGGCTAGGACCAAACTAAACAG chr4 + 94230402 36537310 36537309 36537368 36537310 36537309 36537368 59 GTTTGAAGCCAGAAAGAGAAAATAGAGAAATGAATTCAAGCCAAAATCAAAACAAATAG ..x......:.......x.....:.....:...xxx..:..:.::.:....x:...:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 49683838 NA +3138 chr4 + 190214555 86229919 86229918 86230000 82 GGTACATTGGAATGCACCTGTGGTTCCAGCTACACAGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCATGAGGTCGAGACTG chr4 + 94230402 76033193 76033192 76033274 76033193 76033192 76033274 82 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .:....:x.x::.....x...:...........x::::........x.xx.x.:.x::.....:....x:..x.:x:.:... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 10196726 NA +3541 chr4 + 190214555 86231523 86231522 86231605 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGAGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGGAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........:..:........x.xx.x...x.:........::.:..x:xx:..:..x.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 10198326 NA +3079 chr4 + 190214555 86256693 86256692 86256747 55 AACTTTATGTATTATACTCCATTTTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTT chr4 + 94230402 68431713 68431712 68431767 68431713 68431712 68431767 55 AACTTCATGCTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTTT .....:...:x..x.x....x....x..x..:..:.:....:............. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 17824980 NA +3275 chr4 + 190214555 86286542 86286541 86286627 86 TTATTATCCTCATTTTACAGATGAGGAAACTGAGGCAGAGAGAAGTGAGGAAACTTGTCCAAGGTTAAAGAGCTAAAAGGGGCAGA chr4 + 94230402 93889599 93889598 93889682 93889599 93889598 93889682 84 TCATCATTCCCAGTTCACAGTTCAGGAAACTGAGGCAGAGAAAGGAGAGG--ATCTGTCAAATGTCCAACAGTCCTGGGATGCAGA .:..:..:.:..x..:....x.x..................:.:.x....--.::....x..x..:x..x..::xx::.:x..... 50M2D34M 58/84 69.0% 84/94230402 0.0% 2/84 2.4% -7603057 -86627345 +3312 chr4 + 190214555 86294546 86294545 86294633 88 GAAAACTTCAAGAATAAGTATTTTCTGACATTGAAAAATAGCCAGAGCAAAATTGTGTTGTTTGAAAGAATGAAAACAAATTTTCTTT chr4 + 94230402 45633286 45633285 45633373 45633286 45633285 45633373 88 GAAGACACCAAAAGGTATTATTTTCTCATGTTTATGAAGGACAGTATTAAAATTGTTTTGTTCTAAAAAATGGAAACAAACTTTTCTT ...:..x:...:.:xx.x........x.::..x.x:..x::.x:x.x:........x.....:x...:....:.......:...::.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 40661260 NA +3333 chr4 + 190214555 86295733 86295732 86295818 86 TATATAAATTTATATATATTTTATATATATATATTTTATATATATATATATTCTCTATATTTCCCATCCTCT----TTTCTCTCTTACTA chr4 + 94230402 78811855 78811854 78811943 78811855 78811854 78811943 89 TGTATACTCTTGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA-ATCCCATCTCTTGAAACTTCCTTCTTATTA .:....xx:..:.......:.:x...:.......x.x...x..........::.x....-x.......:::.----:...::.....:.. 59M1D12M4I14M 62/85 72.9% 89/94230402 0.0% 5/85 5.9% 7483878 NA +3480 chr4 + 190214555 86305676 86305675 86305748 73 AAGCATGGTGGCCAGTG-----CCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033187 76033186 76033264 76033187 76033186 76033264 78 AAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x...:.:xx.....-----.x....:.:...........::........x.xx.x...x...........:.:.. 17M5I56M 56/73 76.7% 78/94230402 0.0% 5/73 6.8% 10272489 NA +3033 chr4 + 190214555 86359257 86359256 86359310 54 TTTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...:.::..............:.:.:.:.:.:x..:...:...x...::..... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 59780991 NA +14713 chr4 + 190214555 86359517 86359516 86360227 711 TTCACTTGATTAACCTGCTTTCCACCCCACCTCTCTCGTCTCTTCCATACTCCCTCTCCCGCCCCACCAGGAGCAATCAATAGACATCACCCCACCCTCCAAAAACAGGTTAGAACCCAGAACGAGCAAAG--AGCCACCTACCATTCCGTGC---CTGAGAACTACGATCCTGATCCGGCAGTGTTTGCCCCAGAAATCCTCCCTACTTGTTTTTCATTAACCACATTCCAGAC--TAACATGGAAGAGAT-------TCTTTGGAGATATGGAGATTGTTTAAAATTAACGATGGACAGGTGATTTCCAAGAAAACCCAATCTTAAACTCACTCAAGCCCCTAGGAATTGAGGGGTGAGGACAAAAAAGGAAATTTGTAAAAATGAAAAAAGAAAAGAAAAAGGTAAGCATATAGCAAGCACCACCCACCCCCATAAAAATAAAAAGTGAAGGGGAGGTTAAAGAAAATAGAAGAAGAGTGGCTTGCTGAATCACCCTCTTTCACTGCCTGGAAACCATTGTGCAGCGTGATGCTGCCTGTACCATTGTGGAACCTACCAGAGGAGACGGACAGAGGGCTTGGGGAATGGGGTTGCTATGGCAACCGAAAGGAGCACACATGACGTCAAAGCCCAGAGAGGTCTAGGGAGGGGGATGAGGGGGAAACAGAAAGAGGAAGCGTCTATGTGCAGCTACAGCTACTGTGTTTTCCGGTGAAATGAG chr4 + 94230402 47488988 47488987 47489602 47488988 47488987 47489602 615 TTTGCTCCATTAACCTGCCTTCTGCTCCCCCATTCTTAAAGC------AATCCATCCATCAATCCAC-------GCTCAGCATCCATCACCCCACCCCACAAGAGCAGGTCAG--TCTTTGACCACCAGTGTCAGGTGCCTACCATTCCGTGCTGCCT-----CTGTCCTCCTTGTCCAGCCACCTTCCCCC---GGCTGCACTTCAGGTGGTGTTGTTAAGCCACATTCCAAATGGTGCCAAGGAAGAGATGAGCTTCTTTTGaaaaatataaagaaaaataaaataaaaaGGTGGGCAGCTGG-----------ATCCAACGTT---CTCCTTTAAG-------GAATT-----------ACATAAAAGGGAAT----------GGAGGAGAAAAAGAAAACGGGGAG-------------------------------GCAAAATGTCTGAAGATAGTGGAATAAAAGAGGAG----GTTGGTTGCTGAATCACGCTCTGTCACTGCCTGGGAACCATTGTGCAGC-TGATGCCGGCTGTACCATTGTGGAAG-GACCAGAGGAGACAGGCGGAGCGAT-GGGGAATGGGGCTGCCATGGCAACGGGCAGGAGCGCACATGACGTCAAAGCGC--AGAGGTCTGCAGGGGGGGCAGAGGGGG-AGCAGGGAGAAATGGGATC----TGCAGACACAGCTCCGGTACCTCGCGGTGAACCGGG ..::..:x..........:...::.:..x..x:...::xxx.------.x...x..:x:.:x:....-------:x...::.xx.............:x...:.:.....:..--:.:xx:..x.x..:x.--..x::...............---..-----..::xx....x:...:..x::x..:x...---::x.x.x.:::.xx..x.x..xx.x.:..........:.:--.:x..x.........-------.:..x::.:....::...xx:x.x...xxx..x.:...:...x..:-----------.:....:x..---...x:.:...-------.....-----------...x......:...----------.:.::.::.........x..x:..-------------------------------::....x..xx:::.:x:..x:..x....x..:..----..x.x............x....x...........:..............-......:.x................x-x............:.:.:...x.x.-...........:...:........x.:x......:................x.--........:x:.:.....xx.......-.:...::...::x:.x:..----.....x:......x.x..:::.:x.......x:.:. 42M6D19M7D39M2D16M2I20M3I2M5D29M3D40M2I15M7I46M11D10M3D10M7D5M11D14M10D24M31D35M4D49M1D26M1D25M1D53M2D27M1D19M4D36M 420/601 69.9% 615/94230402 0.0% 124/601 20.6% 38870529 NA +3327 chr4 + 190214555 86365308 86365307 86365374 67 TATAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:........:..::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 10332097 NA +3225 chr4 + 190214555 86372386 86372385 86372459 74 GTGTGCCTGTAAACCCAGCTACTTGGGAGGCTGAGGCAGAGGAATCTCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:x:...........::........x.xx:x...x.x...........:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 10339182 NA +3028 chr4 + 190214555 86372520 86372519 86372596 77 AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112183 41112182 41112259 41112183 41112182 41112259 77 AGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .::......x..x...x...x....x.:..:..xx.x.:.x..........:.:x.x...:..x...:..::.x... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 45260337 NA +3839 chr4 + 190214555 86375575 86375574 86375657 83 CATAGTGGCATGCACCTGTGGTCCCAGCTACTTGGAAGGTAGGGATGAGAGAATCACTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--.....x...:..:...........:....:x.:.x:xx.x...x.......:.....:..x.:x:.....:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 10342378 NA +3203 chr4 + 190214555 86380214 86380213 86380267 54 CTCTGTCTAAAAAAAGAACAAAAACAAACAAACAAAAAAAACCCCCCCAAAAAA chr4 + 94230402 75561888 75561887 75561941 75561888 75561887 75561941 54 CTCTGTTAAAAAAAAGAAAGAAAACAAACAAACAAACAAAATACCCACACACAA ......:x..........x:................x....:x...x..x.x.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 10818326 NA +3398 chr4 + 190214555 86380225 86380224 86380275 51 AAAAGAACAAAAACAAACAAACAAAAAAAACCCCCCCAAAAAAACCTGTTT chr4 + 94230402 9875537 9875536 9875583 9875537 9875536 9875583 47 AAAAAAACAAAAACAAACAAACAAAAAAAACCCC----AAAAAACCCTTTT ....:.............................----........:x... 34M4D13M 44/47 93.6% 47/94230402 0.0% 4/47 8.5% 76504688 NA +3666 chr4 + 190214555 86394139 86394138 86394211 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 10360934 NA +3319 chr4 + 190214555 86431052 86431051 86431130 79 GGAAAGGAGCAAGAAAGAGAAGGAGAGAGAGAGGAAGAGAGGAAAGGAGGAAGAAAAGAGAAAGAAAAGAAAAAAGAAA chr4 + 94230402 32265547 32265546 32265625 32265547 32265546 32265625 79 GGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA ..:......x.x.x.x.x.x..x:..::..::::.........:.....:::..::::....:.....x..x.:..... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 54165505 NA +3363 chr4 + 190214555 86468724 86468723 86468814 91 TGCACCTGTAGTCCCAGCTCCTCTGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x......:......x..:x::........x.xx.x...x::...........:..x:xx:..:..:..------..x..x...... 73M6D12M 61/85 71.8% 85/94230402 0.0% 6/85 7.1% 10435519 NA +3876 chr4 + 190214555 86486125 86486124 86486229 105 TAAATAATCACATGGAAAGTTGG-GTGTGGTGGTGCCCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATCACTTGAAGCAAGAAG-TTTGGATTGTA chr4 + 94230402 76033172 76033171 76033276 76033172 76033171 76033276 105 TATGTAATGTCATGAAAGGATGATACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x:....xx....:..:.x..:-:::::.......--..x......:.........:.::........x.xx.x.:.x........x.x.....-.....::.... 23M1I12M2D57M1I11M 75/103 72.8% 105/94230402 0.0% 4/103 3.9% 10452953 NA +3644 chr4 + 190214555 86494835 86494834 86494899 65 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTCACATATTTTATGTA chr4 + 94230402 15362529 15362528 15362593 15362529 15362528 15362593 65 TTCTTTTCAGAAAAAAAAAAAAGAAAAAAAAGTGAAAATAAACTTAGCTTCATCTATTTTATGTA .:.x.:...:............:........:x:....x...xxx.......:x........... 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 71132306 NA +3028 chr4 + 190214555 86510491 86510490 86510545 55 TGTCATGTATATAAATACACATGAATATATCTATATACATGTATATAAATACACA chr4 + 94230402 47135174 47135173 47135228 47135174 47135173 47135228 55 TGCTGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACA ..:::.......:x............xx:.:...:.........:.:x:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 39375317 NA +3320 chr4 + 190214555 86511837 86511836 86511919 83 GGAAGGAGCAGGAATGAAGGAAAGGAGGGAGGGAACAAGGAAGGAAAG----AAGGAAGAAAGGAGA----------AGAATGAGGAGGAAGGAAAA chr4 + 94230402 18344025 18344024 18344121 18344025 18344024 18344121 97 GGAGTGGAAAGGGAGGAGGAAGAGGAGAGAGGGAACAGGGAAGGAAAATAGCAAGTAGGAAATGGGAGCCTCCAAGTGGAAAGAGGAGAAGGGTAAA ...:x.::x...:.x..:.:.:.....:.........:.........:----...x.:....x.:..----------:...x......:.:..x... 48M4I15M10I20M 61/83 73.5% 97/94230402 0.0% 14/83 16.9% 68167812 NA +3470 chr4 + 190214555 86515840 86515839 86515934 95 AATTAAGACACATCTATTTATCTTTGGGTTTTGTTTTTTGTTGTTGTTTTTTTTTTGTTTTGTTTTTGTTTTTGTTTTGCATTTGCTTTTGGGTT chr4 + 94230402 44312133 44312132 44312227 44312133 44312132 44312227 95 AAGTAGGAATTGTTCAATTTTCCTTGGGATTTGGGTTTTGTTGGTGTTTTTTTTTTTTTTTAAGTAGTTTTTTGTTTTGTTTTTCCAGTTCAGTT ..x..:..xx::.::.x..x..:.....x....xx........x............x....:xx.xxx...........:x...x.xx..x:... 95M 66/95 69.5% 95/94230402 0.0% 0/95 0.0% 42203707 NA +3082 chr4 + 190214555 86516614 86516613 86516667 54 ATTCCTAAGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGTTTGTTT chr4 + 94230402 10099105 10099104 10099158 10099105 10099104 10099158 54 ATACCAAACTATTTTGCTGTTGTTGTTTTTTTTGTGTTTTTTGTTTGTTTGTTT ..x..x..xx:....x:..........x...x.x.................... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 76417509 NA +3052 chr4 + 190214555 86516621 86516620 86516655 35 AGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT chr4 + 94230402 14587475 14587474 14587509 14587475 14587474 14587509 35 AGGGTTTTTTTTTTGTTGTTGTTTGTTTGTTTTTT ...........x....................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 71929146 NA +3714 chr4 + 190214555 86516622 86516621 86516679 58 GGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGTTTGTTTGTTTGCAGCTAC chr4 + 94230402 74136536 74136535 74136593 74136536 74136535 74136593 58 GGGGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCAGGTGC ...x............:.....xx.xx.......................x...x.:. 58M 49/58 84.5% 58/94230402 0.0% 0/58 0.0% 12380086 NA +3103 chr4 + 190214555 86516628 86516627 86516667 40 TTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGTTTGTTT chr4 + 94230402 73409408 73409407 73409447 73409408 73409407 73409447 40 TTTTGTTGTTATTGTTTGTTTCTTTTTTATTTGTTTATTT ..........:..........x......:.......:... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 13107220 NA +3172 chr4 + 190214555 86551513 86551512 86551594 82 TTTCTTCCTTCCATCTTTC------CTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTC chr4 + 94230402 84992620 84992619 84992706 84992620 84992619 84992706 87 TTTCTTTCC-CCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCC ......:.:-......xx.------..:....::..::......:...:.:.:....:..:.x..x:.........:.x..x.x..:. 9M1D9M6I63M 58/81 71.6% 87/94230402 0.0% 7/81 8.6% 1558893 NA +3270 chr4 + 190214555 86587886 86587885 86587956 71 GCGTGCCTCTAGTCCCAGCTACTTGGTAGGCTGAGGCTGTAGATTCACTTGAGCCCAGGAGTTTGAGGCCG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .:.::.x.x....:...........:x........x.:xxx..xx.......:.....:..:..x:...:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 10554682 NA +3561 chr4 + 190214555 86590655 86590654 86590728 74 GTGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGGATAGCTTGAGCATAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.........::........x.xx.x.:.xx:.....:.x:..:..x..x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 10557451 NA +3039 chr4 + 190214555 86600416 86600415 86600471 56 TTTTTTTACATAACCACTTTTTTTTTTTTTTTTTTTTTTTTTTACCTATTCTGATC chr4 + 94230402 22593960 22593959 22594015 22593960 22593959 22594015 56 TTTATGTAAAGAATCACTTTTTTTTTTTTTTTTTCTCTCTTTTGCCTGTAATAATC ...x.x..x.x..:....................:.:.:....:...:.xx.:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 64006456 NA +3527 chr4 + 190214555 86610085 86610084 86610143 59 GCTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x......:...........::........x.xx.x...x.:...........:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 10576879 NA +3404 chr4 + 190214555 86625526 86625525 86625600 75 ACCTGCTAGATATTTTTAGTTTGTTTTTGTTTGCTTATTTTTTTGTGTGTATGTGTGTGTGTTTAATGTCTGGTA chr4 + 94230402 28405906 28405905 28405980 28405906 28405905 28405980 75 ACTAGCTAGGTTTTGTTATTTATTTTTTATTTTCTTACTTTTGTTTGTGTATATGTATGTATTTTATTTTCAGTA ..:x.....:.x..x...x..xx.....:...x....:....x.x.......:...:...:...x..x.:::... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 58219620 NA +3411 chr4 + 190214555 86642414 86642413 86642479 66 AGTTCATCTTTTCTTTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTT--TGAGATGGAG chr4 + 94230402 44980300 44980299 44980366 44980300 44980299 44980366 67 AGTTCAT-TTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAG .......-..xx.:..:...:.........:x.:............:.........--.::....:.. 7M1D48M2I10M 53/65 81.5% 67/94230402 0.0% 3/65 4.6% 41662114 NA +3199 chr4 + 190214555 86692949 86692948 86693021 73 TGCACCAGTAGTCCCAGCTACTCTGGAGGCTAAGGCATGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....xx.....:.........:x::.....:..x.x..x...x.:........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 10659744 NA +3176 chr4 + 190214555 86693074 86693073 86693162 89 AAAAAAAAAAAAAAAAAAAAGACTTAGCATTTCACAAATGTAATTTCTGAAGGGCAAGATCTATAAAATTATTTCTGAAAGTAATTTAA chr4 + 94230402 33567373 33567372 33567461 33567373 33567372 33567461 89 AAAAAAAAAAAAAAAAAAAGATCTTATTAGCAAACAAATGAAACTTTAAAAAATCAAAATCTACTGTATGTTGTTTGCAAACTATTTAA ...................::x....x:.x:xx.......x..:..:x:..::x...:.....:x:x..xx.x.:..x..::x...... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 53125701 NA +3761 chr4 + 190214555 86695597 86695596 86695752 156 ATTTAAAAGACATTTTTGTTTTTCTTACTTATCTTTTTCTATTTTCTCCCTCTCTTT-----CTTTGCTCTCTCCACCTCCCTCTTTCCTTTCCTCTCTCCCTCCCTCCTTTCTTATTTCTCTTTGTTATTCT---TTCTCTAACCTCTTTCAGCAGTTCCCTA chr4 + 94230402 53764480 53764479 53764629 53764480 53764479 53764629 150 ATTTAATAGCTATTGTTTTTAGGCT-------CTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCC-------CCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCA ......x..x:...x..x..xxx..-------......x....x.:.:xx.:.xx..-----.......:.:...-------:..:...........:...........x:x.::.....:.:...:.x:...---..:...x.::::.x...x.xx...:.:. 25M7D25M5I13M7D51M3I28M 98/142 69.0% 150/94230402 0.0% 22/142 15.5% 32931117 NA +3754 chr4 + 190214555 86703733 86703732 86703811 79 GTGGTGCACACCTGTAGTTCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCTGAGAAGTTTGAAGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--................::::........x:xx.x.:.x.......:.:x.....:..x::....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 10670532 NA +3351 chr4 + 190214555 86715189 86715188 86715256 68 TTTATATTTAAATTGTTGTGTTTGTGTGTATGTGTGTGTGTATATACGTGTGTGTGTATATATGTGTA chr4 + 94230402 65759973 65759972 65760037 65759973 65759972 65760037 65 TTCATATCTA---CTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ..:....:..---:x..:x:......x......:.......::....:...x........:..:.... 10M3D55M 50/65 76.9% 65/94230402 0.0% 3/65 4.6% 20955216 NA +3197 chr4 + 190214555 86728641 86728640 86728719 79 GCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAGATCTTCCTATGTCCCTTTATTT chr4 + 94230402 36195287 36195286 36195363 36195287 36195286 36195363 77 GCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTG--CTTCCCTTGCCCCCTCTTTT ..x....:...:..x.....:.......::...x....:...xx....:..::x.x.--.....:x..:...:.:x... 57M2D20M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 50533354 NA +3584 chr4 + 190214555 86745647 86745646 86745718 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 10712441 NA +3063 chr4 + 190214555 86751915 86751914 86751977 63 TTGTATGTATGTGTGTGTGTGTGTGTGTGTGCATGCACATGTGCATATATATCTATATATATG chr4 + 94230402 85834532 85834531 85834594 85834532 85834531 85834594 63 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATG ..:.x::.x.....x................:..xx.::.:x.....:....x..x...:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 917383 NA +3064 chr4 + 190214555 86761116 86761115 86761172 57 TATGTGATGTGTGTGTGTGTGTAAATATATATATATATATATATATATATATATAAA chr4 + 94230402 83657508 83657507 83657564 83657508 83657507 83657564 57 TGTATGATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAA .:.:......x...x.......:x............x.x.x.........x..x:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 3103608 NA +3287 chr4 + 190214555 86803155 86803154 86803244 90 TATTTTTTATATATACACATACATACATATATATTTATTGTGTATATATATACACACACATATATACATATATATTTATTGTGTATATAT chr4 + 94230402 52366995 52366994 52367076 52366995 52366994 52367076 82 TATTTTTTGCATGTACACATT--------TTTTTTTAATGTGTACATACATACACGCACATGAACTCGTGCGTATTTAATTTGTTCATGT ........::..:.......x--------.x.x....x......:...:......:.....:x.:x.:.:::......x.x...x:..:. 21M8D61M 59/82 72.0% 82/94230402 0.0% 8/82 9.8% 34436160 NA +3025 chr4 + 190214555 86803167 86803166 86803218 52 ATACACATACATACATATATATTTATTGTGTATATATATACACACACATATA chr4 + 94230402 87329508 87329507 87329559 87329508 87329507 87329559 52 ATGTATATATATACACGTATACTAGCAGTGTACATACATACACACACATATA ..::.:...:.....::....:.x::x.....:...:............... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -526341 -93704061 +3167 chr4 + 190214555 86803200 86803199 86803252 53 ATATATACACACACATATATACATATATATTTATTGTGTATATATATAGAATA chr4 + 94230402 23477854 23477853 23477906 23477854 23477853 23477906 53 ATATATACACATACATATATAAATATATATTTGTTTTATAGGAGTGTAAAATA ...........:.........x..........:..x.:..x:x:.:..:.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 63325346 NA +4084 chr4 + 190214555 86807636 86807635 86807760 125 AGAAGAGTTCGTTTACATTGCCTGCCAAGGACCACTGCCTACAACTGTTGGAGACTTCTGGCAGATGATTTGGGAGCAAAAATCCACAGTGATAGCCATGATGACTCAAGAAGTAGAAGGAGAAA chr4 + 94230402 92038917 92038916 92039035 92038917 92038916 92039035 119 AGAAGGACTC--CTACATTGCCAGCCAAGGGCCACTGCAGCACACGATAGAGGACTTCTGGAGGATGATCTGGGAGTGGAAATCCTGCTCCATAGTGATGTTAAC----AGAGCTGGAGGAGAGA .....:::..--:.........x.......:.......xxxxx..x:.x.::.........x:......:......:::......xxxx:x....:x...x.:..----::..:x.:......:. 10M2D93M4D16M 81/119 68.1% 119/94230402 0.0% 6/119 5.0% -5231281 -88999121 +3096 chr4 + 190214555 86812170 86812169 86812239 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 10778973 NA +3036 chr4 + 190214555 86820504 86820503 86820559 56 CATCTCAAAAAAAAAACAAAAAACAAACAAAAAAAAACCTCACGGTAATACTCATT chr4 + 94230402 31926808 31926807 31926863 31926808 31926807 31926863 56 CACCACAAAAAACAAACAAAAAACAGAAAAAAAGAAACCAAACAACAACATTCACT ..:.x.......x............:.x.....:.....xx..:::..:.:...:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 54893696 NA +3707 chr4 + 190214555 86823222 86823221 86823304 83 CATGGTGGCACACACCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAAGGGAATCACTTGAACCCAGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--...::.:...........::........x.xx.x...x.............:..x:xx:..:...:. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 10790025 NA +3436 chr4 + 190214555 86829271 86829270 86829353 83 CGTGGTGACACATGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::...:::..:.--....:.:.........::.:........x.xx.x...x:............:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 10796074 NA +3433 chr4 + 190214555 86835679 86835678 86835768 90 AGACAGAAAGACGAA-AAGACACAAGAAAAGAAGAAAAGAAAGAAAAGGAGAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAA chr4 + 94230402 31955433 31955432 31955523 31955433 31955432 31955523 91 AGATAGCAAAAAGAGTGAGACACAAGACAATAAGAAAGAAAAGACAAAGAGGAGAGAGAAAACAAGGGAGATTAATGAAGACCAAAAAGAA ...:..x..:.x..:-:..........x..x......::.....x..:...:...:.....:x...::...xx:.x::...xx:...::.. 15M1I75M 61/90 67.8% 91/94230402 0.0% 1/90 1.1% 54880246 NA +3321 chr4 + 190214555 86835701 86835700 86835769 69 AAGAAAAGAAGAAAAGAAAGAAAAGGAGAAGAA---AGAAAGAAAGAAAGAGA-GAGAGAGAGAGAAAGAAAA chr4 + 94230402 69368739 69368738 69368811 69368739 69368738 69368811 73 AAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAA .......::........:..:.....:.:....---x.:.:.:........:.-..x.x..:..x........ 33M3I17M1I19M 54/69 78.3% 73/94230402 0.0% 4/69 5.8% 17466962 NA +3283 chr4 + 190214555 86835703 86835702 86835761 59 GAAAAGAAGAAAAGAAAGAAAAGGAGAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAG chr4 + 94230402 32265570 32265569 32265628 32265570 32265569 32265628 59 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAG .:..:..........:..:.:......:.:.:.:.....:....:x:.x.....:.x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 54570133 NA +3524 chr4 + 190214555 86837171 86837170 86837336 166 AGGGAGAGGAAGAAGAGCCCATGGTGCATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044662 49044661 49044808 49044662 49044661 49044808 147 AGAGAAAAGAATAAGAGATTAGGG---GTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---------------GGAAGAGTTAAAGAAAGAA-GAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ..:..:.:...x.....x::.x..---:..xxx...:...x.::x..x....::x.xx...x:......---------------.:....:xx..........-.....:x::....x.....:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 24M3D42M15D19M1D62M 95/147 64.6% 147/94230402 0.0% 19/147 12.9% 37792509 NA +4028 chr4 + 190214555 86837172 86837171 86837330 159 GGGAGAGGAAGAAG----AGCCCATGGTGCATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGA-----AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148345 51148344 51148516 51148345 51148344 51148516 172 GGGAGAGCACGGGGCTGTGGCAAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG .......x.x.::.----:..xx....:.:x.::...:...:::..xx.x...........:.........x.:.:----.:.:xx::..x.:..x.x:..::.x:...:.:...:..:.....:..::.:x..x.-----.:.x.x.........:..x:x.xx:..:... 14M4I58M4I56M5I31M 100/159 62.9% 172/94230402 0.0% 13/159 8.2% 35688827 NA +3358 chr4 + 190214555 86837202 86837201 86837326 125 AGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGA-----AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148383 51148382 51148516 51148383 51148382 51148516 134 AGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ...:::..xx.x.....................x.:.:----.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....:::.::..x..x.-----.:.x.x.........:..x:x.xx:..:... 38M4I56M5I31M 79/125 63.2% 134/94230402 0.0% 9/125 7.2% 35688819 NA +3431 chr4 + 190214555 86837202 86837201 86837348 147 AGAGAGAGAGAGAG-AGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGCA chr4 + 94230402 49044667 49044666 49044816 49044667 49044666 49044816 150 AAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCA .:...:x:.....x-..:.:x:.xx.......x.::x..x:....:x.--...x:......::.::.:xx..::..::.......:x:..:..x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:....::x::... 14M1I33M2I100M 86/147 58.5% 150/94230402 0.0% 3/147 2.0% 37792535 NA +3087 chr4 + 190214555 86837218 86837217 86837295 78 AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..::.::.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x..:::.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 45725040 NA +3107 chr4 + 190214555 86837226 86837225 86837303 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x...:.:x..:.:.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 45725048 NA +3358 chr4 + 190214555 86837228 86837227 86837326 99 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG---AAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 10269792 10269791 10269893 10269792 10269791 10269893 102 AAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG ...x.:.:...x.:x.......::.:....x:..::..x:....---..::....x.x...:..x.......:..:x:xx..:.:..::...x:..x..... 44M3I55M 65/99 65.7% 102/94230402 0.0% 3/99 3.0% 76567436 NA +3096 chr4 + 190214555 86837230 86837229 86837307 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:..x.x..::.:x..:.:.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 45725052 NA +3056 chr4 + 190214555 86837269 86837268 86837333 65 AAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 26216011 26216010 26216074 26216011 26216010 26216074 64 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGA-AAAAGAAGGTGGGGAGGGGAGAAGGCAG ..x.:x...................x::...:..:.-:..:.....x:..:...:::.....x.. 36M1D28M 47/64 73.4% 64/94230402 0.0% 1/64 1.6% 60621258 NA +3661 chr4 + 190214555 86839315 86839314 86839393 79 GTGGTACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATGGCTTGAGCTCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:...:--......:.........:.::........x.xx.x.:.xx:.....:.:...:..:..x:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 10806114 NA +3539 chr4 + 190214555 86842784 86842783 86842883 100 TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:......x... 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 23145644 NA +3088 chr4 + 190214555 86842786 86842785 86842867 82 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 29470758 NA +3015 chr4 + 190214555 86842787 86842786 86842879 93 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 63697147 63697146 63697239 63697147 63697146 63697239 93 TTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:.x... 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% 23145640 NA +3298 chr4 + 190214555 86842788 86842787 86842893 106 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TTTTTTTTTGAGATGGA chr4 + 94230402 63697140 63697139 63697247 63697140 63697139 63697247 108 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAA ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........--.....x...:...x.:. 89M2I17M 67/106 63.2% 108/94230402 0.0% 2/106 1.9% 23145648 NA +3057 chr4 + 190214555 86842789 86842788 86842871 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 29470762 NA +3257 chr4 + 190214555 86842793 86842792 86842890 98 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTGAGAT chr4 + 94230402 57372027 57372026 57372124 57372027 57372026 57372124 98 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGATAT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x.x..x..x..x.. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 29470766 NA +3294 chr4 + 190214555 86853742 86853741 86853842 101 CGTGGTGGTGGGTACCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACATGAACCTGGGAGTGAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::......--:..x....x.:...........::........x.xx.x...x...x......::.:..:xxx:..:..:..------..x..x...... 10M2D71M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 10820545 NA +3271 chr4 + 190214555 86895177 86895176 86895255 79 GTGGTGGCACACACCTGTAGCCCCAACTACTCCAGAGGCTGAGGCAGGAGGATCCCTTGAGCCCAGGAGGTTGAGGCTG chr4 + 94230402 76033201 76033200 76033274 76033201 76033200 76033274 74 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......-----...x.....::...:.....:x.:........x.xx.x.:.x.x.....:.....:..x..x:..... 6M5D68M 55/74 74.3% 74/94230402 0.0% 5/74 6.8% 10861976 NA +3294 chr4 + 190214555 86898263 86898262 86898334 72 GTGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGACACAAGAATCGCTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::.:......x.x::x...x.:.....:.....:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 10865057 NA +3461 chr4 + 190214555 86910282 86910281 86910354 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.xx.x...x...........:.:..x.xx:.x:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 10877077 NA +3145 chr4 + 190214555 86910953 86910952 86911043 91 TGCACCTGTAGTCCCAGCTACTCAGGGGGCTGAGGCAGGAGGATTGCTTGAACCTGGGAGGCAGAAGTTGTAGTGGGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x......:.........:::::.......x.xx.x.:.x::........::.:..x:xx::.:.....------..x..x...... 73M6D12M 58/85 68.2% 85/94230402 0.0% 6/85 7.1% 10877748 NA +4068 chr4 + 190214555 86915646 86915645 86915716 71 ACATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::........:.--....:.:...........::........x.xx.x...x.............:.. 15M2D54M 56/69 81.2% 69/94230402 0.0% 2/69 2.9% 10882450 NA +3458 chr4 + 190214555 86917336 86917335 86917498 163 AAGGAAGGATGGAAGGAAGGAAGGAAAGGATGGAAGGAAGGAAGGAAAGGAAGGAAGGAAGGAGAGAGAAAGAGAGGAAGAGAGAGAGAAAGAAAAAGAAAGGGAGAGAAAGAGAAAAAGAAAGAAAGAAAAGAAAGAAATAAAGAAAAAGAAAGGGAGAGAA chr4 + 94230402 45017392 45017391 45017550 45017392 45017391 45017550 159 AAAGAAAGATGGAATAGAT-ATGGCAAGTATTTAGAGAAGGG-GAACAGACTGTAAGGAA--AGGCTGTTGGAAAGGAAAAAAAAGCGAAAGAAACAGAATGGGAGAGAAACAACATGAAAGAGACTGATAAAACTGCGACTAGCATGAAGAAGCTGAAAGGA ..:...:.......x::.x-.x..x...x..xx.::.....:-.:.x..:xx.x......--..:xx.xx:..:.....:.:.:..x........x....x..........x.:x.x:.:.:...xx..x..:.xx.x:.:x.:x.x:.....:xx..:..:. 19M1D22M1D17M2D101M 100/159 62.9% 159/94230402 0.0% 4/159 2.5% 41899944 NA +3012 chr4 + 190214555 86917397 86917396 86917448 52 GAGAGAGAAAGAGAGGAAGAGAGAGAGAAAGAAAAAGAAAGGGAGAGAAAGA chr4 + 94230402 65032005 65032004 65032056 65032005 65032004 65032056 52 GAAGGGGGAAGAGTGGAAGGGAAAGATAAGGGAAAAGAAAGCAAGAAAAAGA ..::.:.:.....x.....:..:...x..:.:.........x:...:..... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 21885392 NA +3643 chr4 + 190214555 86917422 86917421 86917572 151 AGAAAGAAAAAGAAAGGGAGAGAAAGAGAAAAAGAAAGAAAGAAAAGAAAGAAATAAAGAAAAAGAAAGGGAGA--GAAAGAAAGAGAAAAAGAAGAAAGAAAAGAGAGAGAAAGAGAAAGAAAAGTAAGGAAGGAAGAGAGAGTG--AGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAA-----------ACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAG------CATGAAGGAAGGGAGCGTGCCGGGGAGG ........:...xx.x:......:.....:......-----------.x....:.xx....xx::..x..:.x.--..::.x:.........:...:..:.::..:..x..x.xxxx:...------x.x........:...x...--:...... 36M11D27M2I45M6D19M2I7M 94/134 70.1% 138/94230402 0.0% 21/134 15.7% 35769043 NA +4279 chr4 + 190214555 86917435 86917434 86917584 150 AAGGGAGAGAAAGAGAAAAAGAAAGAAAGAAAAGAAAGAAATAAAGAAAAAGAAAGGGAGAGAAAGAA-----AGAGAAAAAGAAGAAAGAAAAG----AGAGAGAAAGAGAAAGAAAAGTAA--GGAAGGAAGAGAGAGTGAGGGAGGGAGGAAGGAGAA chr4 + 94230402 84536568 84536567 84536725 84536568 84536567 84536725 158 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGA---TTAAGAAGGCAAAAATTAAAA ......:..::.:.......:.x.:x..:..x..:...x:.x:..:...::...........:.....-----:x..x....xx..x.:xx:...----x:.........x...x.:...x:.--..:.........---.x.:.:...x.::..xx.:.. 68M5I22M4I24M2I12M3D21M 101/147 68.7% 158/94230402 0.0% 14/147 9.5% 2380867 NA +3013 chr4 + 190214555 86917485 86917484 86917527 43 AGAAAGGGAGAGAAAGAAAGAGAAAAAGAAGAAAGAAAAGAGA chr4 + 94230402 22388895 22388894 22388937 22388895 22388894 22388937 43 AGACAGAGAGAAAAAAAAAGAGAAAAAGAAGAAAGAAATGTGA ...x..:....:...:......................x.x.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 64528590 NA +3752 chr4 + 190214555 86917507 86917506 86917614 108 AAAAAGAAGAAAGAAAAGAGAGAGAAAGAGAAAGAAAAGTAAG-----------GAAGGAAGAGAGAGTGAGGGAGGGAGGAAGGAGAAGGGAAGGGAAA------GAAGGAGGGAGGAAGGGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .:.........:xx.x.........:...........x:x...-----------:.x....x.x:...x.x.:...::.::..:.::..:...:..:x.:------....x.x.:.......... 43M11I46M6I19M 76/108 70.4% 125/94230402 0.0% 17/108 15.7% 35769128 NA +3479 chr4 + 190214555 86917577 86917576 86917657 81 AAGGAGAAGGGAAGGGAAAGAAGGAGGGAGGAAGGGAGGGAGGGAAGAAGAGAAAGAGAAAGGAAGGAGGAAGGAAGGAAA chr4 + 94230402 84536568 84536567 84536648 84536568 84536567 84536648 81 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAA ....::.......:.:...:..x:.x::.::x...:..x..:.:..:...:.....:..:......:..xx.x.x..x... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 2381009 NA +3080 chr4 + 190214555 86917586 86917585 86917645 60 GGAAGGGAAAGAAGGAGGGAGGAAGGGAGGGAGGGAAGAAGAGAAAGAGAAAGGAAGGAG chr4 + 94230402 4113357 4113356 4113416 4113357 4113356 4113416 60 GAAAGGAGAAGTAAAGGGGGGGAAAGGAGGGGGGTGAAGAAAGAGAGAGAGAGCAGGGAG .:....::...x.:::...:....:......:..x:.::.:...:.....:..x.:.... 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 82804229 NA +3024 chr4 + 190214555 86919278 86919277 86919349 72 GAAAATTTTCAAATCTTTCCATTCTGCTTTTTTCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGGAGGAG chr4 + 94230402 17850305 17850304 17850376 17850305 17850304 17850376 72 GAAAATATACAAGTTCTTACACTGTGCTGCTTTTCGGTTTTTTGTTTGTTTGTTTGTTTTTTTAATAAGGAG ......x.x...:.::..x..:.x....x:...:.xx:.....x...x...x...x.......:.x:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 69068973 NA +3393 chr4 + 190214555 86919300 86919299 86919413 114 TCTGCTTTTTTCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGG-----------AGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATTTTGACTAACTGCAACCTCTACCTC chr4 + 94230402 14401526 14401525 14401648 14401526 14401525 14401648 123 TCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTTAAGAGAGCTCTTTATAGAGTTATCACTATACTACTT--TCTTAAGTAATGGGAAAGGATTCTGGATATCTTCAACTTCTCCCTC ..::.......:....::......:.....:..........:..:-----------..::x.x.::..x.:::..::--x..x:...:xx.x.:x.x....:..:x..x..x....:...x.... 45M11I21M2D46M 74/112 66.1% 123/94230402 0.0% 13/112 11.6% 72517774 NA +3330 chr4 + 190214555 86940954 86940953 86941030 77 GTTGGACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCGCTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x:...x....:.:...........::........xxxx.x...x.:.........x.:..x.xx:..:..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 10907753 NA +4993 chr4 + 190214555 86949838 86949837 86949910 73 ACCTCGTAGGTGTAGTTGGGGCAGGACACCAGCAGGAAGAGCCACGTGAAGGGGTTCTTGGTGGGGTATGGGA chr4 + 94230402 50556469 50556468 50556541 50556469 50556468 50556541 73 ACCTCATAAGTATAGTTGGGACAGGATACCAGCAAGAAGAGCCACGTGAAGGGGTTGTAGGTTGGACTTGGAA .....:..:..:........:.....:.......:.....................x.x...x..::x...:. 73M 60/73 82.2% 73/94230402 0.0% 0/73 0.0% 36393369 NA +3400 chr4 + 190214555 86963036 86963035 86963095 60 TGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCACGAGAATTGCTCGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:............:........x.x:.x...x::..:.....::.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 10929831 NA +3206 chr4 + 190214555 86972123 86972122 86972211 89 GCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTGAAGAGCAGAAAAGCAGGCATTTTATGCTTAAGGGAGAGCCAGAGAA chr4 + 94230402 82629035 82629034 82629108 82629035 82629034 82629108 74 GCCAGTCTCATTAAAAAAAGAAAAAAAAAAAAGGCAAAATTTGAAGTATGGAAAAGA---------------AAATGAGGGCCAGAAAA ..:x......xx.......:............::x...:.......x:::......x---------------..:x...:......:.. 57M15D17M 56/74 75.7% 74/94230402 0.0% 15/74 20.3% 4343088 NA +3257 chr4 + 190214555 86973690 86973689 86973791 102 TTTTCCAGAGTTAACGTTTTCTTTCTTTTCTTTTCTTTTTTCCTTTCTCTTTTCTCTTTTCCTTTCTTTTTTTTCTTTTCTTCCTTTCTTCCTTTCCTTTTT chr4 + 94230402 36195277 36195276 36195375 36195277 36195276 36195375 99 TCTTCCAA---TAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTTAGCGTTTT .:.....:---..:.:...........x.:...::...........x.:.x..:.xxx..:x:.:x...x:..:.:..x.::...:.:..x:..xx.x.... 8M3D91M 65/99 65.7% 99/94230402 0.0% 3/99 3.0% 50778413 NA +3164 chr4 + 190214555 86973720 86973719 86973822 103 TTTTCTTTTTTCCTTTCTCTTTTCTCTTTTCCTTTCTTTTTTTTCTTTTCTTCCTTTCTTCCTTTCCTTTTTCCTTTCCCTTTTCCTTTCCCTTTTCCTTCAT chr4 + 94230402 68974683 68974682 68974780 68974683 68974682 68974780 98 TCTACTCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCC-----TCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCAT .:.x..:.....:x....::xx..:.....::...:........:x.x:.....-----..:x...xx.....:.x.x:x..:.x........x.:::::... 54M5D44M 64/98 65.3% 98/94230402 0.0% 5/98 5.1% 17999037 NA +3114 chr4 + 190214555 86973749 86973748 86973810 62 TCCTTTCTTTTTTTTCTTTTCTTCCTTTCTTCCTTTCCTTTTTCCTTTCCCTTTTCCTTTCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTG-------TCTCTTTTCCTTTCC ......:......:::.........::..::....:...x-------..:............ 40M7D15M 44/55 80.0% 55/94230402 0.0% 7/55 12.7% 12543068 NA +3272 chr4 + 190214555 87022528 87022527 87022585 58 CTTCCCGTGCTTACAGATATATATATATATATATATATATATATATAT-ATATATATCT chr4 + 94230402 9193575 9193574 9193633 9193575 9193574 9193633 59 CTTTCTGTGCTTACAAACCTATATATATATATATACACACACACATATGATATAAACCT ...:.:.........:.:x................:.:.:.:.:....-.....x.:.. 48M1I10M 46/58 79.3% 59/94230402 0.0% 1/58 1.7% 77828953 NA +3070 chr4 + 190214555 87022599 87022598 87022671 73 TGTGTGTATATATATCTGTGTGTGTATAT----ATATGTGCGTGTATATATGTGTGTGTATATATATGTGTGTGTAT chr4 + 94230402 5214245 5214244 5214321 5214245 5214244 5214321 77 TGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x..:.:.:.:....::....:.::..----..:....:.:.:.x.::........:..::.x.......:::.. 29M4I44M 49/73 67.1% 77/94230402 0.0% 4/73 5.5% 81808354 NA +3427 chr4 + 190214555 87022599 87022598 87022687 89 TGTGTGTATATATATCTGTGTGTGTATATATATGTGCGTGTATATATGTGTGTGTATATATATGTGTGTGTATATATATGTGTGTGTAT chr4 + 94230402 5214233 5214232 5214321 5214233 5214232 5214321 89 TGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ......:::.x:.:....:::::::..x..::...::.::.x.::.........:::.x.::........:..::.x.......:::.. 89M 53/89 59.6% 89/94230402 0.0% 0/89 0.0% 81808366 NA +3557 chr4 + 190214555 87022616 87022615 87022678 63 GTGTGTGTATATATATGTGCGTGTATATATGTGTGTGTATATATATGTGTGTGTATATATATG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:...::..x:...:..:x......:...:...........:..x...:..:..x.:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 388687 NA +3023 chr4 + 190214555 87022619 87022618 87022663 45 TGTGTATATATATGTGCGTGTATATATGTGTGTGTATATATATGT chr4 + 94230402 65759992 65759991 65760036 65759992 65759991 65760036 45 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ....x:...:......:...:...:....x........:...... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 21262627 NA +3446 chr4 + 190214555 87022632 87022631 87022693 62 GTGCGTGTATATATGTGTGTGTATATATATGTGTGTGTATATATATGTGTGTGTATGTATAT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .......::..x:.:.:...x.:....:...:...........:..x...:..:..x.:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 388703 NA +3253 chr4 + 190214555 87022642 87022641 87022709 68 ATATGTGTGTGTATATATATGTGTGTGTATATATATGTGTGTGTATGTATATCTGTGTGTATATATAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:x.:...:..:::..x:.:.:...x.:....:...:........:..:..:...:..:..x.:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 388719 NA +3170 chr4 + 190214555 87022660 87022659 87022727 68 ATGTGTGTGTATATATATGTGTGTGTATGTATATCTGTGTGTATATATATATCTGTGTGTATATATGT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...x.:...::.:::..x..:.:...x......:x..:....:......:..:...:..:..x.:.:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 388737 NA +3252 chr4 + 190214555 87022677 87022676 87022804 128 TGTGTGTGTATGTATATCTGTGTGTATATATATATCTGTGTGTATATATGTATATATATCTGTGT-------GTGTGTATATATATATAATAT-CATGTGTGTGTATATATATACAT--------------ATCACGTGTGTGTATATAT chr4 + 94230402 79265520 79265519 79265669 79265520 79265519 79265669 150 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACAT .........:..:..:.x....xx.:......:..x:::....::.:.:.:.x.:....:.....-------::x.x......x..::.x.x.-.x.x.x..x..:..:.x..:...--------------.x...x...:.x....:.. 65M7I21M1I23M14I19M 86/128 67.2% 150/94230402 0.0% 22/128 17.2% 7757157 NA +3334 chr4 + 190214555 87027726 87027725 87027802 77 CTAATTCAAAATCCTAAACATTCCAAAATCTGAAACTTTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTT chr4 + 94230402 34771831 34771830 34771907 34771831 34771830 34771907 77 CTGACTCAGCATACTAAACATGCCAAGAAATATCCACTTTTGTTGTTGTTGTTGTTTTGTTTGTTTTGTTTTCTTCT ..:.:...:x..x........x....:.xx.:xxxx:..............:....xx....x....x....:..:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 52255895 NA +3320 chr4 + 190214555 87027747 87027746 87027817 71 TCCAAAATCTGAAACTTTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGAGT chr4 + 94230402 42595712 42595711 42595779 42595712 42595711 42595779 68 TCAATACTCTGGATTTTTTTGTTGTTGTTGCTGCC---TTTTTTTTTTTTTTTTTTTCCCTGGAATTAAAT ..x.x.x....:.x:..................::---...................:::.x..:x.:.:. 35M3D33M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% 44432035 NA +3206 chr4 + 190214555 87027762 87027761 87027814 53 TTTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTGAGGTG chr4 + 94230402 74136541 74136540 74136592 74136541 74136540 74136592 52 TTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTC-AGGTG ...........:...:.............x...x...x...x....:-..... 47M1D5M 45/52 86.5% 52/94230402 0.0% 1/52 1.9% 12891221 NA +3398 chr4 + 190214555 87027762 87027761 87027808 47 TTTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 81934684 81934683 81934730 81934684 81934683 81934730 47 TTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTT ...............:...............x.xxx........... 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 5093078 NA +3035 chr4 + 190214555 87027763 87027762 87027804 42 TTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 61549813 61549812 61549854 61549813 61549812 61549854 42 TTTTGTTGTTGTTGTTGTTGGGTTTTTTTTTGGCTTTTTGTT ..............:................xx:.....x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 25477950 NA +3003 chr4 + 190214555 87049082 87049081 87049120 39 AAAAAAAAAAAAAAGGGGGGGGGGGGACAACTTAACATT chr4 + 94230402 70751941 70751940 70751979 70751941 70751940 70751979 39 AAAAAAAAAAAAAAGGGGGGGGGGGGACAGCATAATTTT .............................:.x...:x.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 16297141 NA +3170 chr4 + 190214555 87051373 87051372 87051446 74 CTCACTTTTATCTTTCATCATTCCTCTTTTTCTTTCCTTTTTCTTTTTTTTTTTTTTAACGTACTCATTCAACA chr4 + 94230402 80181782 80181781 80181855 80181782 80181781 80181855 74 CTCAATCCTTCCCTTCAATATTCCACTTTTTTTTTTCTTTTGCTTTTTGGTCTTTCTAAAATGATTGTGCAACA ....x.::.x:.:....x:.....x......:...:.....x......xx.:...:...x:.:x.::.x..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 6869591 NA +3020 chr4 + 190214555 87060834 87060833 87060891 58 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAA chr4 + 94230402 7664419 7664418 7664476 7664419 7664418 7664476 58 TTAAGAAGGAAGGAGGAAAAAAAAAAAAAAAAAACTCAGAAAAATCAGAAGAAACAAA .:..:..::..::.::...................x..:.....:x.x..x...x... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 79396415 NA +3202 chr4 + 190214555 87060836 87060835 87060897 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAACGGAAT chr4 + 94230402 49206622 49206621 49206683 49206622 49206621 49206683 62 AAGAAAAAAAAAAAAAACACACAAAAGCAAACAACCAAACAACGACAACAAAAGAACAGGGT ..:..............x.x.x....:x...xx..x...x...:.........:...:.::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 37854214 NA +3026 chr4 + 190214555 87060842 87060841 87060896 55 AAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAACGGAA chr4 + 94230402 11041417 11041416 11041471 11041417 11041416 11041471 55 AAATTAAGCAAAAAAAAAACAAAAAACACAAAAAGACAAAAACAAATCAGCTGAA ...xx..:x..........x..............:....x......xx.:.x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 76019425 NA +3042 chr4 + 190214555 87060847 87060846 87060896 50 AAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAACGGAA chr4 + 94230402 17691367 17691366 17691416 17691367 17691366 17691416 50 AAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAA ..................:........x.....:x:.x...:.x..x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 69369480 NA +3294 chr4 + 190214555 87069377 87069376 87069440 64 CCTTCTGTCCCCATCTCCTCTCTTTTCTGTCTCTCCCTCCCTCCCTCTCCCCTTCTCCCTCTCT chr4 + 94230402 50958175 50958174 50958238 50958175 50958174 50958238 64 CCTGCTGCTCTCATCTTATCTCTTTTCCCTTTCTCCCCCCTTTTCTACCCTGTCCTCCCTCCCT ...x...::.:.....:x.........:x.:......:..:.::..x:..:x.:.......:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 36111202 NA +4253 chr4 + 190214555 87090885 87090884 87090957 73 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::........x:xx.x...x.......:.....:..x..x:.....:.. 73M 57/73 78.1% 73/94230402 0.0% 0/73 0.0% 11057680 NA +3217 chr4 + 190214555 87090970 87090969 87091048 79 AAGCCACTACACTCCAGCCTAGACAACGGTGAGACCCCGTCTCTCTACCACCAAAAAAAAAAAAAAAAAAAAAAAGGTT chr4 + 94230402 45193460 45193459 45193538 45193460 45193459 45193538 79 AAACTAACGAACTTCCATCTAAACAATAATAAAAATCCATCCCACTCCCACAAAAAAAAAGAAAGCAAAAAAAAAAATT ..:.:.x::x...:.x::...:....:::.:.:.x:..:..:.x..x....x........:...:x.........::.. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 41897510 NA +3370 chr4 + 190214555 87091274 87091273 87091345 72 GCACCTGTAGTCCCAGCTACTGGAGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x..:........x.xx:x...x.:........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 11058068 NA +3275 chr4 + 190214555 87092148 87092147 87092225 78 AGTCATGTGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTAGGAAGTAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:..::.x...:..:...........::........x:xx.x.:.x.......:..:..:.:x.xx:..:..:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 11058948 NA +3058 chr4 + 190214555 87096375 87096374 87096429 55 CAGGGACACACCCGGCTTTTTTTTTTTTTTTTTTTTTGGTAGAGGTGGGGTCTCC chr4 + 94230402 78245882 78245881 78245936 78245882 78245881 78245936 55 CACGGACATGGACAGCTCTTTTTTTTTTTTTTTTTTTGCTGAAGGTAAGACCTCC ..x.....::xx.:...:....................x.::....::.::.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 8850493 NA +3154 chr4 + 190214555 87135513 87135512 87135575 63 TTCCATTTTAATTTTTGTGTGTGCTTGTGTATTTACTTGTTTTTGTTTTGTTTTGTTTTTTTT chr4 + 94230402 62522691 62522690 62522753 62522691 62522690 62522753 63 TTTCACTTGACTTGTTGTGGGTGTTTGTGTATGTGTTGGTTTTTTTTTTTTGTTGTTTTGTTT ..:..:..x.x..x.....x...:........x.::.x......x....x.x.......x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 24612822 NA +3032 chr4 + 190214555 87142594 87142593 87142643 50 TCCTTCCTTCACCCCCCCCCCCATTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 5672112 5672111 5672161 5672112 5672111 5672161 50 TTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGA .:...x.::.x......x...:x...............x.:......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 81470482 NA +3315 chr4 + 190214555 87146044 87146043 87146115 72 GCACCTGTCCTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCAAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...xx.:...........::........x.xx:x...x..........x..:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 11112838 NA +3254 chr4 + 190214555 87149011 87149010 87149092 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGGAAGCGAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::........x.xx.x...x.:.........:.:.:x:xx:..:..:.. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 11115810 NA +3087 chr4 + 190214555 87149152 87149151 87149194 43 AAACAACAATAACAACAACAAAAAAAACTGTCTTCAGAACTAT chr4 + 94230402 40599665 40599664 40599707 40599665 40599664 40599707 43 AAACAATAACAACAACAACAAAAAAAACTTCCTTCAGGTCTAT ......:..:...................x:......:x.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 46549487 NA +3688 chr4 + 190214555 87156029 87156028 87156102 74 GTGCACCTGTGGTCTCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTTGAGACTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..::..........::........x:xx.x.:.x.:.....:.....:..:..x:.:..::.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 11122825 NA +3264 chr4 + 190214555 87158255 87158254 87158308 54 AAAAAAACCAAAAGGGAAAAAAAAAAAAAAAAGAAATGATAGATTCAAGGAGGT chr4 + 94230402 91504312 91504311 91504365 91504312 91504311 91504365 54 AAGGAAGCCAAATGGTAAAAAAAAAAAAAAAAAGAAGAATAAATCCAAAGAGGT ..::..:.....x..x................::..x:...:..:...:..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -4346057 -89884345 +3272 chr4 + 190214555 87158884 87158883 87159001 118 GGGCAACAGAGTGAGACTCTATCTC-------AAAAAACAACAACAACAACAACAACAACAACAACAAAAGAGAAATGTAGTGACCAGAAATACTTTCATACTGCTAAGAAGAGACTACAAAAAA chr4 + 94230402 4792616 4792615 4792740 4792616 4792615 4792740 125 GGGCAATAGGAAGGAAATCCACCTTCCCTGTTGGGAAAAAAAAAAAACAACAACAAAAAACAACACAGAAGAGAAAGGTAATAAATAAATGTAATAGAAGACTGATAAAAGAGGACTAGGACAAA ......:..::x.::.x..:.:..:-------:::...x..x..x...........x..xx.xx...:........x...:.:.x:.:.x:..x.xxx.x....x...:.:::.....x:.x... 25M7I93M 75/118 63.6% 125/94230402 0.0% 7/118 5.9% 82366268 NA +3665 chr4 + 190214555 87168653 87168652 87168766 114 TATATATGTATATATATGTGTGTATATATGTGTGTATATATATACGTATATATATGTGTATATATATACGTATATA--TATGTGTGTATATATACGTGTATATATGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGG--------GCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:....:.:.x.x....x--------.:..:.x.....:...x:.:.....:x:..:..:x.........:..--:...:x.x.:.:....:......:x..:..::..:.:. 21M8D47M2I38M 72/106 67.9% 108/94230402 0.0% 10/106 9.4% 66059459 NA +3068 chr4 + 190214555 87168657 87168656 87168713 57 TATGTATATATATGTGTGTATATATGTGTGTATATATATACGTATATATATGTGTAT chr4 + 94230402 86633934 86633933 86633990 86633934 86633933 86633990 57 TGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .::...x:.......x......:...:....:......:.:x.:...::..x..... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 534723 NA +3563 chr4 + 190214555 87168658 87168657 87168755 98 ATGTATATATATGTGTGTATATATGTGTGTATATATATACGTATATATATGTGTATATATATACGTATATATATGTGTGTATATATACGTGTATATAT chr4 + 94230402 5214224 5214223 5214321 5214224 5214223 5214321 98 ACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .:.:..x::.:....:.:.x:.:.x..:::.:.:..x.....:...::..x..:..:.:.:.:..:.x.::.:......:..::.x.:....::.:.. 98M 58/98 59.2% 98/94230402 0.0% 0/98 0.0% 81954434 NA +3100 chr4 + 190214555 87168665 87168664 87168781 117 TATATGTGTGTATATATGTGTGTATATATATACGTATATATATGTGTATATATATACGTATATATATGTGTGTATATATACGTGTATATATGTGTGTGTATATATATGTGTATATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .::.x.....:x:..:x.:::.:..x::.:.::.:::.x:.:.x..:.:.:.:..x::::.:...:::.x..:..:.:.::.:.:.x.::........:..::.x......::.:.. 117M 61/117 52.1% 117/94230402 0.0% 0/117 0.0% 81954460 NA +3343 chr4 + 190214555 87168735 87168734 87168827 93 TGTATATATACGTGTATATATGTGTGTGTATATATATGTGTATATATATACGTATATATACACACATATATATACACACACATATATATATAT chr4 + 94230402 21109190 21109189 21109282 21109190 21109189 21109282 93 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGT ..:x....:.:....:.x.x....x.:....x.......::x:.:......x::.:..:x:.:..:...:..:x..::.x:x.:.:.....:. 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 66059545 NA +3039 chr4 + 190214555 87174230 87174229 87174272 43 TATATCATATATATGTGTGTATGTGTGTGTGTATATATATATA chr4 + 94230402 72529260 72529259 72529302 72529260 72529259 72529302 43 TACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..:..:x....:.:......:............:......... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 14644970 NA +3039 chr4 + 190214555 87174230 87174229 87174272 43 TATATCATATATATGTGTGTATGTGTGTGTGTATATATATATA chr4 + 94230402 72525687 72525686 72525729 72525687 72525686 72525729 43 TACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..:..:x....:.:......:............:......... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 14648543 NA +3419 chr4 + 190214555 87184602 87184601 87184687 86 TAAATGAAGAAAGGAAAAAATGGAGGAAGGGAAGGAGGGAAGGGAGAGAAAGGAGAGGAAG----------------ACGACAAAAGAAAAAAAGATCACAA chr4 + 94230402 24028136 24028135 24028237 24028136 24028135 24028237 102 TAAGTGAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGACAGTTCAGGAACGTCAGAACTCAAGAATGTCACAA ...:...::.........xxx...:.::...:...:....:::.......::....:....----------------...x..:..xxx..:..x:...... 61M16I25M 61/86 70.9% 102/94230402 0.0% 16/86 18.6% 63156466 NA +3502 chr4 + 190214555 87189894 87189893 87189976 83 CATGGTGGCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--......:...........::........x.xx.x...x.:........:x.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 11156697 NA +3056 chr4 + 190214555 87200140 87200139 87200188 49 AAAAAAAAAAAAAAAAAAAAAGAAA----AAAAAAAAGGTAAAGGACTTGAAT chr4 + 94230402 41136197 41136196 41136249 41136197 41136196 41136249 53 AGGAAAAAAAAAAGAAAAAAAGAAACTTGGAAACAAAAGCAAAGGACTTGAAT .::..........:...........----:...x...:.:............. 25M4I24M 42/49 85.7% 53/94230402 0.0% 4/49 8.2% 46063943 NA +3412 chr4 + 190214555 87205278 87205277 87205349 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGGGAGGATCGCTTGAGCCCAGGAGGTCGAGGCCACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::.......:x:xx.x.:.x.:.....:.....:..x.:x:...:::.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 11172072 NA +3644 chr4 + 190214555 87217235 87217234 87217302 68 TTGTTCAGAAAAAAAAAAAAGACATAGTCAAGTGAATTTTAGCGACTGAAAACAACATTTTGTTATTT chr4 + 94230402 29038141 29038140 29038207 29038141 29038140 29038207 67 TTATTCAAATAAAAAAAAAAAACA-AATCATCTGAAGTTCATCAGCTGAAAACAACATTTTGTGATTT ..:....:.x..........:...-.:...xx....x..:.x.::..................x.... 24M1D43M 54/67 80.6% 67/94230402 0.0% 1/67 1.5% 58179094 NA +5080 chr4 + 190214555 87226631 87226630 87227051 421 ACTTATATAAATAATATATATATTACTTATATATAATATATATTATTTATATATAATATATATATTATTTATATATAATATATATTATTTATATATAATATATATTATTTATATATAATATATATTATTTATATATAATATATATTATATATATAATATATATTATATATAATATATATTATATATAATATATATTATTTATAAATAATATATATATTATATATAAATAATATATATTATATATAAATAATATATATTATATATAAATAATATATAATATATAAATAATATATATATTATATATAAATAATATATATTATATATAAGTAATATATATTATATATAAATAATATATAATATATAAATAATATATATTATATATAAATAATATATATTATATTTCCTTTCTGATATCATCTTC chr4 + 94230402 63976809 63976808 63977155 63976809 63976808 63977155 347 ACTTGATCAGAAGGTATAAATATTA---------AATGACTTCTATTTTTAAATGATG---ATACTATT-ACATAC----TTTATCCTTTATAGCAAATGCAGAT-GTATAAACATAAGATAAAG-ACATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATAT-----------TTTACAATATACATGTAAATTTTAACTATAGACTATATACTACA--------------GTTTTATATGACTAACataaattat----ttgatatttat------tttaaattatatatattttagaca------ttatattataatGCACTTCTGTA--------AAGTCATCTAGACTTTGGAT------TCTGCATTATGTTTCCTTTCAGGAAATATCTTC ....:xx:.:.x::....x......---------...:xx.x:.....x..x..:..:---...:....-.:...:----.x...:x......xxx...::.x..-:.x..x.:....x...x.x-.:x..:....:xx....:::..::.....x.:...:x...x...........:..:....-----------....:..xxx.:..:..x...x..xx..x.x.x......:..:.--------------:..x.....:.x...:...x.x...----x.:....x...------.x.....x.........x..x.:.------x.........xxxx.x.xx.:..--------..:.x..x..x.:.x.:x..------.x.::.....:.........x.:x.x:...... 25M9D24M3D8M1D6M4D25M1D19M1D60M11D44M14D25M4D11M6D24M6D23M8D20M6D33M 236/347 68.0% 347/94230402 0.0% 74/347 21.3% 23249822 NA +3609 chr4 + 190214555 87226705 87226704 87226851 147 ATAATATATATTATTTATATATAAT---------ATATATTATTTATATATAATATATATTATTTATATATAATATATATTATATATATAATATATATTATATATAATATATATTATATATAATATATATTATTTATAAATAATATATATATTATA chr4 + 94230402 26320199 26320198 26320344 26320199 26320198 26320344 146 ATAAAATATTTT-CTTATATGTATTCAAATGTTGATAT-TTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----GTATATTTTT----AGTATTGTATATGTAATA ....x....x..-:......:..x.---------....-...x.:.xx.xx...x...x.:.:x.:......x..:............:x.....:.x.....x..x...:...:xx...----:......x..----.:..x.:.....:.x... 12M1D12M9I4M1D81M4D10M4D18M 101/137 73.7% 146/94230402 0.0% 19/137 13.9% 60906506 NA +3100 chr4 + 190214555 87226750 87226749 87226864 115 ATATATTATTTATATATAATATATATTATATATATAATATATATTATATAT---AATATATATTATATATAATATATATTATTTATAAATAATATATATATTATATATAAATAATATA chr4 + 94230402 60709394 60709393 60709508 60709394 60709393 60709508 115 ACATATTCTGGATATGAAAGAGATATTTATTATACAACATATATTATATATCTGAGTGTG---TATATATACTATATGATGACTATAAAGCATATTTTAATTTTACAGTGAGGACATA .:.....x.xx....:x..x.x.....xxx....:..:.............---.:.:.:---........x.....:x.:x:......xx....x.xx...x..:.xx:.x:.:... 51M3I6M3D55M 77/112 68.8% 115/94230402 0.0% 6/112 5.4% 26517356 NA +3238 chr4 + 190214555 87227520 87227519 87227615 96 TGTACCTATAGTCCCAGCTATCTGGGAGGCTGAGGTGGGAGGATCCCTTGAGCCCAGTAGTTGGAGGTTGCAGTGAGCTATGATCATGCCATGCAG chr4 + 94230402 76033205 76033204 76033294 76033205 76033204 76033294 90 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAG ..:..x.:....:.......::..::........x:xx.x.:.x.x.....:.....x..:.xx:..:..:..------.xx..x......x.... 73M6D17M 62/90 68.9% 90/94230402 0.0% 6/90 6.7% 11194315 NA +3407 chr4 + 190214555 87234299 87234298 87234418 120 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCA----------CTGAGCGGAGGT----CGTACCACTGCACTCAGCCTGGCAAC chr4 + 94230402 76033197 76033196 76033328 76033197 76033196 76033328 132 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGAC .:::.........:--......:.........::::........x.xx.x...x::........::.:..x:xx:..:..:.----------.::...:..x..----.x..xxx....x.:....x...::.. 14M2D66M10I12M4I26M 79/118 66.9% 132/94230402 0.0% 16/118 13.6% 11201102 NA +3090 chr4 + 190214555 87243080 87243079 87243122 43 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGAGAAAGA chr4 + 94230402 17691367 17691366 17691409 17691367 17691366 17691409 43 AAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGA ..................:..x.x...x......:........ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 69551713 NA +3023 chr4 + 190214555 87243082 87243081 87243145 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGAGAAAGAATGAAAGAAAGAAAGAGAAAAAG chr4 + 94230402 86089093 86089092 86089156 86089093 86089092 86089156 64 AAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGG .....:x:x.:::..............:....:.:...x...::.:.:.:...:.x..x...:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 1153989 NA +3182 chr4 + 190214555 87244213 87244212 87244284 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx::x.........:..x.xx:.x:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 11211007 NA +3051 chr4 + 190214555 87256576 87256575 87256626 51 TTTCTTTTTTCTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 2999901 2999900 2999951 2999901 2999900 2999951 51 TTTCCTTTTGCTTGCTTGCTCTTTTTTTTTTTTTTTCTTTTGGTTGTCTTG ....:....x...x....:.:...............:....xx..x.:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 84256675 NA +3533 chr4 + 190214555 87259603 87259602 87259730 128 CCTCAAGCATTCTCTTCTCTTTTCTTTTCT--------TTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTCCCTCCCTCCCTTCCTTTCTTTC---TTTTCTTTCTTTCTTTTTTTTTT chr4 + 94230402 33980795 33980794 33980929 33980795 33980794 33980929 135 CCTCAA--ATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTC--CCCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTTATT ......--.......xx..x...:x..:..--------:.....x.:..x.:...xx...:x......x......:.....x.x....--........::.:.x::::.x...---..:x...:x::..x......x.. 6M2D22M8I50M2D23M3I23M 88/124 71.0% 135/94230402 0.0% 15/124 12.1% 53278808 NA +6920 chr4 + 190214555 87259611 87259610 87259735 125 ATTCTCTTCTCTTTTCTTTTCTTTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTCCCTCCCTCCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 27163706 27163705 27163827 27163706 27163705 27163827 122 ACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCct---ttctttctttctttctttcttttctttctttcttttctttctttctttctttctttctttcttt .:..::..:.x....:.:..:.:.x.....xx.....:..:.............:...---.......:...:.:.:.:.:.::...:........::...............:...:...:... 58M3D64M 93/122 76.2% 122/94230402 0.0% 3/122 2.5% 60095905 NA +3085 chr4 + 190214555 87259622 87259621 87259697 76 TTTTCTTTTCTTTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTCCCTCCCTCCCTT chr4 + 94230402 64726509 64726508 64726584 64726509 64726508 64726584 76 TTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ...x:x..:.x...:.:........x.xxxx.::..::......:..:x........::.::...:......::.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 22533113 NA +3766 chr4 + 190214555 87259631 87259630 87259726 96 CTTTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCTTTCC------TTCCTCCCTCCCTCCCTTC----CTTTCTTTCTTTTCTTTCTTTCTTTTTT chr4 + 94230402 21408807 21408806 21408912 21408807 21408806 21408912 106 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTT .....x..........:x:.xx.:...:..x::..x::.::.......x------....:...::.......x.----:x....................::::.. 49M6I19M4I28M 69/96 71.9% 106/94230402 0.0% 10/96 10.4% 65850824 NA +3000 chr4 + 190214555 87259670 87259669 87259722 53 CCTTCTTTCCTTCCTCCCTCCCTCCCTTCCTTTCTTTCTTTTCTTTCTTTCTT chr4 + 94230402 70062265 70062264 70062317 70062265 70062264 70062317 53 CCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTT .....::.x......x.:..:...x...::...:...:.....:..x...... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 17197405 NA +3250 chr4 + 190214555 87259686 87259685 87259758 73 CCTCCCTCCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTGACAGAGTCTCACTCTATCGCC chr4 + 94230402 56907960 56907959 56908031 56907960 56907959 56908031 72 CCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTT-TTCTTTCACC ..x....::.:....::x.:.::.:...:.....:..........:......:..::.x..:-:...x..:.. 62M1D10M 50/72 69.4% 72/94230402 0.0% 1/72 1.4% 30351726 NA +3285 chr4 + 190214555 87267713 87267712 87267763 51 TCAAAAAAAAAAAAAAGGAGAAAAGAAAAGAAAAGAAGGAAGAGGAAGAAA chr4 + 94230402 40414743 40414742 40414793 40414743 40414742 40414793 51 TTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAA .:...::...........:.::::.:.......:..:..:........... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 46852970 NA +3050 chr4 + 190214555 87276903 87276902 87276993 91 TCATTTATCACTCATCCATCAATGGACATTTGGTCTGGGCTGATGGTTTTTTTGTTGTTTTGTTGTTTTTTGTTTTGTTTTTTGTTTTTGA chr4 + 94230402 82144282 82144281 82144372 82144282 82144281 82144372 91 TCAAATATTAACCAACCTTTAATCTTTTCTTTCTCTGGGTTATTAGTTTTGTTGTTGTTGTTTTGTTTTGTTGTTGGTTTTTTGTGTGTGA ...xx...:.x:..x..x.:...xxx:x:..xx......:.:x.:.....x........x.x.......x.xx..x.........x.x... 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% 5132621 NA +3122 chr4 + 190214555 87296860 87296859 87296930 71 GTGCACCTGTGGTCCCAGCTACTCAAGAGGCTGAGGTGCAAGGACTGCTTGAGCCTAGGAGGTCGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x...:..:.........::.:........x:x::x.:.x::.....:..:..:..x.:x:..:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 11263656 NA +3350 chr4 + 190214555 87309255 87309254 87309326 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAGCCAGGAGGCAGAAGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x........x....:..x:xx::....:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 11276049 NA +3265 chr4 + 190214555 87314609 87314608 87314657 49 AGGTAGAGTCGTTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248040 75248039 75248088 75248040 75248039 75248088 49 AAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::..:.x:.x.::..................x................ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 12066569 NA +3282 chr4 + 190214555 87314620 87314619 87314661 42 TTTTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.::.................x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 12066573 NA +3589 chr4 + 190214555 87314621 87314620 87314659 39 TTTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:.................................... 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% 12066571 NA +3199 chr4 + 190214555 87314622 87314621 87314663 42 TTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::...............x.x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 12066575 NA +3002 chr4 + 190214555 87314623 87314622 87314657 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 74713318 NA +3316 chr4 + 190214555 87314624 87314623 87314659 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 74713320 NA +3102 chr4 + 190214555 87314626 87314625 87314661 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 74713322 NA +3096 chr4 + 190214555 87328837 87328836 87328906 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 11295640 NA +3070 chr4 + 190214555 87334479 87334478 87334536 58 TTCTTCTTCTTCTTTTCTTCCTCTTCTTCTTCTTTTCTTCTTCTTCTCCCTCTTCCTC chr4 + 94230402 49829851 49829850 49829908 49829851 49829850 49829908 58 TTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC ..x..:..x::.x......:..:..:.........:.....::::.:...:..:.... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 37504628 NA +3779 chr4 + 190214555 87334510 87334509 87334608 99 CTTTTCTTCTTCTTCTCCCTCTTCCTCTTCCCTTCTTCTTCTTCCCTCCTCCTCCTCCTCCCCTTCCCCTTCCTCCTCTTCCTCTCCTTCTTCTTATCA chr4 + 94230402 53764535 53764534 53764618 53764535 53764534 53764618 84 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTC---------------CCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCA ....x...:...::...:.::........:..:..---------------.....x.x:..x:........x..:....x...:.:..:x.....:... 35M15D49M 62/84 73.8% 84/94230402 0.0% 15/84 17.9% 33569975 NA +3727 chr4 + 190214555 87342253 87342252 87342324 72 GCACCTGTAATTCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTAGAACCCAGGAGGCAGAGATTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:...........:..:........x.xx.x...x....x........:..x:xx:.::..... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 11309047 NA +3172 chr4 + 190214555 87346510 87346509 87346592 83 CATGGTGGCACGCACCTGTACTCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCGCTTGAATCTGGGAGGTGGAGGCCGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....x.:...........::........x.xx.xx..x.:......:.::.:..x.xx:...:.:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 11313313 NA +3633 chr4 + 190214555 87347071 87347070 87347152 82 TGATGATTTTAGGGTTGTTTTTAGTATTCTGGATTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTT chr4 + 94230402 67586610 67586609 67586689 67586610 67586609 67586689 80 TGGTGGTCCTAG--CTGATCTTAGCATCGAGAACTTTTCTTTTTTCTTCTTCTTTTTTTCTTTTTAACTGTACTTTGTGTTT ..:..:.::...--:..x.:....:..:xx.:.:....:.........:..:.......:.....x.:.:....:.:x.... 12M2D68M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 19760461 NA +3975 chr4 + 190214555 87376360 87376359 87376447 88 TGGGGCATGGTGGTGTACGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033192 76033191 76033277 76033192 76033191 76033277 86 TGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x:..::......:...--....:.:.........:..:........x.xx.x...x.:...........:..x:xx:..:..:.. 19M2D67M 62/86 72.1% 86/94230402 0.0% 2/86 2.3% 11343168 NA +3287 chr4 + 190214555 87377319 87377318 87377392 74 GTGCACCTGTAATCCCAGCTGCTCAGGAGGCTGAGGCAGGAGAATCGCCTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:......:..::::........x.xx.x...x.:.:.......:.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 11344115 NA +3182 chr4 + 190214555 87378902 87378901 87378971 70 ATAAATATATATATATAAATATATATAAATATATATATATATATATTTATATATATATATTTTTTTTTTT chr4 + 94230402 23063144 23063143 23063213 23063144 23063143 23063213 70 ATAAGCCCTTGTGCAAGAATACTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTT ....::x:x.:.::.x:....:x.:...x...............:.x.:.:.:.:...x........... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 64315758 NA +3067 chr4 + 190214555 87379974 87379973 87380053 80 ACAGGTATCTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAAGATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....xx:.x::.x....:.:.........:..:........x.xx.x::.x::...........:..x:xx:..:..:.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 11346776 NA +3500 chr4 + 190214555 87380330 87380329 87380415 86 ATGCGTGGTGGCGGGCATCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:::....:.--..:x....:.:.........:..:........x.xx.x...x::...........:..x:xx:..:..:.. 13M2D71M 58/84 69.0% 84/94230402 0.0% 2/84 2.4% 11347136 NA +3266 chr4 + 190214555 87380432 87380431 87380535 104 CACTACACTGCAGCCTGGGCAACAGAGCAAGACTGTCTCAAAAAAAAAAA----AAAAAAAGAAAAAAGAAAAGAAAAGAGAAAAAGAAAAAAAGTTCTGATACTAAA chr4 + 94230402 78266931 78266930 78267036 78266931 78266930 78267036 106 CACTATGAAGCAGTTTTTG--ACAGAGATAAATCAGCCTAAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGA .....::xx....::.xx.--......xx.:.:::x.::..:....x...----.......:...xx.:..::.........:.....:.:.....x:.:.x..:.:. 19M2D29M4I54M 68/102 66.7% 106/94230402 0.0% 6/102 5.9% 9113501 NA +3286 chr4 + 190214555 87380460 87380459 87380522 63 AAGACTGTCTCAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAGAAAAAGAAAAAAAG chr4 + 94230402 85790948 85790947 85791010 85790948 85790947 85791010 63 AAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAG ......:xx.:....:..:...................:::..:::.:.x...:.:.:..x.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 1589512 NA +3466 chr4 + 190214555 87385779 87385778 87385857 79 GTGGTGGGCACCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:.:.........::........x.xx.x...x........:..:.:..x:xx:..:..:.. 6M2D71M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 11352578 NA +3375 chr4 + 190214555 87398475 87398474 87398557 83 AGTGGTGGCGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTAGATGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----::.x.:..:.:...........::........x.xx.x...x.............:..x.xx:x.:..:.. 7M5D71M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% 11365275 NA +3691 chr4 + 190214555 87411948 87411947 87412026 79 GTCATGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGAGAGCTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:....:.--....:.:...........::........x.xx.x...x...........:::....xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 11378747 NA +3034 chr4 + 190214555 87412337 87412336 87412406 70 CTGGCTTAAAAAAAAAAACACCAAAAAACAGTCCATGAAAGCTTTGAAAACTACTTACTTTCAACTGCAA chr4 + 94230402 18192809 18192808 18192878 18192809 18192808 18192878 70 CTGTTTAAAGATTAAAAATACTAAAATAAAGTCCAAGAAAGCTTTTACAACTACTCAGTTTAGCATGCAA ...x:.x..:.xx.....:..:....x.x......x.........x.x.......:.x...x:xx..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 69219528 NA +3016 chr4 + 190214555 87426926 87426925 87426963 38 CTCCCTTGCCAAAAAAAAAAACAAAAAACTAAACCAAA chr4 + 94230402 3957839 3957838 3957876 3957839 3957838 3957876 38 CTTCCGTGCCAAAAAAAAAAACAAAACACTAAACCAAA ..:..x....................x........... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 83469087 NA +3013 chr4 + 190214555 87439306 87439305 87439359 54 TACATGGCAACAGGTGACAGAGAGTGAATAAGTAAAGGGGGAAGAGCCCCTTAT chr4 + 94230402 11613702 11613701 11613755 11613702 11613701 11613755 54 TACAAGGCACAAGGTGGAAGAGAGTGAATAAGGAAAAGGGTAAAAACTCATTAT ....x....xx.....:x..............x...:...x..:.:.:.x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 75825604 NA +3129 chr4 + 190214555 87453813 87453812 87453894 82 AAAAGTTTTATGATATTTACATTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTGT chr4 + 94230402 22344057 22344056 22344138 22344057 22344056 22344138 82 AAAAAGCTTATGAGTCCTTCATTTCCAATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCTGACATAGAAACTCCTTGT ....:x:......xx::.x......:xx:..:x...:x:::.......:...:.........:...x.:...:x...x:... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 65109756 NA +3396 chr4 + 190214555 87462459 87462458 87462518 60 TTTGGTCTCCACGTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTGGTATGTAT chr4 + 94230402 26578247 26578246 26578306 26578247 26578246 26578306 60 TTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTAT ....x...:x:.:x.:.xx.....:...:...:...:.....:................. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 60884212 NA +3077 chr4 + 190214555 87465540 87465539 87465590 51 GAAAAGGAATAGAAATCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT chr4 + 94230402 49328443 49328442 49328493 49328443 49328442 49328493 51 GAAATGAAATAGGAATTTGTCAAAAAAAAAAAAAAGAAAAGAAAGAACAGT ....x.:.....:...:.::x..............:....:...:..x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 38137097 NA +3077 chr4 + 190214555 87511944 87511943 87511985 42 CCTTTCCTTTCCTCTTTCTTTCTCTTTTTTTTTTTTTTTGAG chr4 + 94230402 76064717 76064716 76064758 76064717 76064716 76064758 42 CCTTTCCTTTCCTTTTTTTTTCCCTCTTTTTTTTTTTTCCAG .............:...:....:..:............:x.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 11447227 NA +3369 chr4 + 190214555 87514064 87514063 87514136 73 TGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTTCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x....:.:...........::........x.xx.x...x:x...........:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 11480859 NA +3986 chr4 + 190214555 87530129 87530128 87530252 124 TGGCAGAATTTGAGGCCAGCCAGC-----TTGGATTTGCATCCTATCTTCACCACTTCCTAAC-TATGACCCGGGACAAGTTATATAACCTCTCTAAAGCATCAGTGCTTTTATCTATAAGACAGGGATA chr4 + 94230402 13242409 13242408 13242538 13242409 13242408 13242538 130 TGACAGAGCACAGGACAAGACAGCAAGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATA ..:....::x:::.:.x..x....-----...::x.:xxx...:.x..:::.....xx..x..-.:.....:x..:.....:.::..:.........x..x.....x:::::....:...:.:....... 24M5I34M1I66M 80/124 64.5% 130/94230402 0.0% 6/124 4.8% 74287720 NA +3818 chr4 + 190214555 87537738 87537737 87537820 83 CACAGTGGCATGTACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCATGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--..:..x....:.:........:..::........x.x..x...x.:........::.:..x:xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 11504541 NA +4151 chr4 + 190214555 87542508 87542507 87542807 300 CCCTTCACTTCCCATCTCTGGCTCTGTCCTGTGTCATAGGGGAATAGCATATTCATTTA--------ATTTTTTCTCTGGCATTTTTCACTTTTCATT-------GTGTAATACAGAG---TCCTCTATCCCTTACTAGGTAATATTTTCAAACAGGGATTCTTTCTTTC---------TTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTT------TCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTC chr4 + 94230402 50176102 50176101 50176415 50176102 50176101 50176415 314 CTCTGCACTTCCCATTGTTGGTTTTCAAACAT----TAAGGAGCTCGTACTTTTATGTAGGTGATTCATTCTTTCCCTATCATTCCTCTCCTGACATTTGAAATTGGATTTTGCAGAGGTACCATTTGCCTCTAACTGA----------TAAGAAAGGTTTGTTTCTGGCAAGATGGATTTTCTGTCTCACTG-CTCTCCTTTCTTCCTTTAT--CCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTT--TTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .:..x..........:x:...:.:.xxxx::.----..:..::x.x.:.:x..:..x..--------...:....:..:x....::..x.:.xx....-------.x:.xx.:.....---:.x.:.::.:..x...::----------:..:x.:..x..x.....xx.---------.....x...:x..x-..:.:.......:....x.--.:x:.:x::...x:x.:x........x.::..:x.x..:x...--..x...............------:.x.:..:::x...::..x.:..:.......::..::::...x.:.... 32M4D23M8I31M7I13M3I18M10D21M9I14M1D19M2D43M2D18M6I49M 177/281 63.0% 314/94230402 0.0% 52/281 18.5% 37366406 NA +3320 chr4 + 190214555 87542555 87542554 87542747 193 CATATTCATTTAATTTTTTCTCTGGCATTTTTCACTTTTCATTGTGTAATACAGAGTCCTCTATCCCTTACTAGGTAATATTTTCAAACAGGGATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTT chr4 + 94230402 64726426 64726425 64726584 64726426 64726425 64726584 159 CATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTA-----------------CTCTATTCCTCG--------TAGTTTTAGA---------TGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ...x:.:x..:.x::...x......xx...:.x.:.:..:.-----------------......:...::--------..x...:.:.---------.x:......x::.x.:x.:x...x.x...:x.:.:....:....:x.xxxx.:...:....:..::.:x:........::....:...::...:.. 41M17D12M8D10M9D96M 100/159 62.9% 159/94230402 0.0% 34/159 21.4% 22816129 NA +3701 chr4 + 190214555 87542630 87542629 87542768 139 TAATATTTTCAAACAGGGATTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTCTT--TCTTTCTTTCTCTTC-TTTCTTTCTTTCTCTTCTTT chr4 + 94230402 63697087 63697086 63697238 63697087 63697086 63697238 152 TATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ..x...x..:...::x.::.x..::-----....x..:..:..:..:::xx.x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:...x:--.......:..:.:..-..........:..:..:x.. 25M5I65M5I14M2I15M1I20M 92/139 66.2% 152/94230402 0.0% 13/139 9.4% 23845543 NA +3458 chr4 + 190214555 87542649 87542648 87542751 103 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--------TTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTCTTT chr4 + 94230402 37898161 37898160 37898271 37898161 37898160 37898271 111 TTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTT ..:.:.:.......x.....x......x...x.:..:.x:...xx....x.::..x.--------..x.......xx.x.......x::x..x...:.:...x.:..x... 57M8I46M 72/103 69.9% 111/94230402 0.0% 8/103 7.8% 49644488 NA +3537 chr4 + 190214555 87542651 87542650 87542764 114 CTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCT--TCTTTCTTTCTT-TCTCTTCTTTCTTTCTTTCTCTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:..:::xx.x.:..:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..:x:--.......:..::-...:.........:....:.x.. 65M5I14M2I12M1I23M 77/114 67.5% 122/94230402 0.0% 8/114 7.0% 23845534 NA +4110 chr4 + 190214555 87542667 87542666 87542794 128 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-------TTTCTTTCTTCCTTTTTATTT ....x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx....--....xxx:....x:..:.::x.xx.......:..:.:...-------..........:......x... 60M2I40M7D21M 83/121 68.6% 123/94230402 0.0% 9/121 7.4% 23845550 NA +4401 chr4 + 190214555 87542676 87542675 87542824 149 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCT-TTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTT-----TCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCTTTCTTTTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATC-CGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATT-----TTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:x..x:::.:.......:....x.:-.x::.x:.:..x.x..x........-......x.x...x..-----...x...............-----:.:x:..::.:x...::..x.:......:..:...::.:..::x..... 35M1D25M1I15M5D19M5I49M 99/143 69.2% 149/94230402 0.0% 12/143 8.4% 37366410 NA +3031 chr4 + 190214555 87542722 87542721 87542786 65 TTCTTTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 90927825 90927824 90927889 90927825 90927824 90927889 65 TTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCTCCTATATATCT ...:.:.::.x......:...:.:.......xx.:........:..::.:..:.:..x.x.x... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -3385103 -90845299 +3844 chr4 + 190214555 87542749 87542748 87542931 183 TTTCTTTCT---TTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCT--TTCTTTTTTCTTTCTTTCT------------TTCCTTTCTTTTCTTTCCTT------CCTTCCTTCTTT-----CCTCCCTTCCTTCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCCTTTCTTTC-------CTTGCTTTTCTTTTCT chr4 + 94230402 38131862 38131861 38132079 38131862 38131861 38132079 218 TTTCCTTTTGAATTCTCTTGACTTTTTTCCCCCCTCTTGCTTTTCCTTTTTTTTCTTCCTGCTTTTTGACTCTCTATTCCTTCTGTTTGGATCCCAGCTCTTCCGACTTTTTCCCAGCTCTCAGAGCCTTTCTTCTTTGCCCACCTCACCTCTCTGTATGCAGTCACACATCTCCTTTGTTATCTCCATCCCTTCTCACTGTCTTGCTGCTTATCTCT ....:..:.---.......xx:.:...::::.::....x.....:....:...:......x.:..:.--:...:.x...:....x.:.------------....xx::.....::xx..:------....:.......-----....x.:..::.x.x.x.xx..x:x.x.:..:..:x..x.:...x.:.:...-------......x:.:x.:... 9M3I55M2I19M12I20M6I12M5I52M7I16M 121/183 66.1% 218/94230402 0.0% 35/183 19.1% 49410887 NA +4104 chr4 + 190214555 87542750 87542749 87543009 260 TTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTT---CTT-----TCTTTCCTTCCTTCCTTCTTTCTTTTTTCT---TTCTTTCTTTCCTTTCTTTTCTTTCCTTCCTTCCTTCTTTCCT--CCCTTCCTTCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCCTTTCTTTCCTTGCTTTTCTTTTCTTTCTTTCTTCCTTCCTTCCTTCTTTCTTTCCCTTCCTTCCATCCT------------------TCCTTCCTCCCTTCCTCCTTTCCTTTCTTTCTT chr4 + 94230402 61286086 61286085 61286367 61286086 61286085 61286367 282 TCCTTATTTTCTTCAAGTCATTTCTTTTTTTTTTTTTTTTTAAACCTAAGAATCATTTCTTACT--CTTCTCACTCTCTTCCACAGCCATTCTATTCCTTTAGTCCTTTGCTAAACCCCTTATTTCATTGCCCAGTTCTCTGTAACATCTTCCTCCTCTCTGCCTCCTCCAGTTGT-------CTGTTCTTTTCTGTCTTTCCTCCCATCTCCCACTCTCTCCTCTTCTGGTTCTGTCCTTATTAATTATCTGACAGCTTCTTCCTTCATACCCGTTCCACTATCTTTGTT .:...x:.....::xxx.:x.......:...:...:.....---.:.-----..x..:...x..--.....:x..:.:...:---x:.x....x.:.:..:xx.:....x..xxx::....x....x.--...xx:::...x.xx:x....:..::...:.x.:..:.:.xx..x.-------..x.........x......:...:x:..:..x:::.::::..:::.xx...::....------------------.:......:.x.x..:x:.::x..x.....x.. 41M3I3M5I12M2D16M3I43M2I46M7D57M18I33M 156/251 62.2% 282/94230402 0.0% 40/251 15.9% 26256664 NA +12204 chr4 + 190214555 87542891 87542890 87543168 278 TTTCTTTCCTTCTTTCCTTTCTTTCCTTGCTTTTCTTTTCTTTCTTTCTTCCTTCCTTCCTTCTTTCTTTCCCTTCCTTCCATCCTTCCTTCCTCCCTTCCTCCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCTTTCCTTGCTTTTCTTTTTCTTTCTTCCTTCCTTCCCTCTTTCTTTCTTTCCCTTCCTTCCTTCTGTCCTTCCATCCTTCCTTCCTCCTTTCCTTTCTTTCCTTCTTTCCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTC chr4 + 94230402 27163699 27163698 27163946 27163699 27163698 27163946 248 TTACTCTACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCC--------------------ctttctttctttctttctttcttttctttctttcttttctttctttctttctttctttctttctttctttctttct-------ttctctctctctctctctctctttctctctttctctctttctctctctctttctctctttctctctttctttctttc---tttctttctttctttctttctttctttcATTC ..x..:.x..:....::x..:....:..x..x..:..xx:....:................:.--------------------.:...:...:.:.:...:.:....:..................:...........:..x:..:.:.:.........-------...:....:...:...:..:...:..::...::x::...:.x::..::...:...::..:..:......:.......---.:.:.:...............:...:..x:.. 63M20D76M7D77M3D32M 184/248 74.2% 248/94230402 0.0% 30/248 12.1% 60379192 NA +3988 chr4 + 190214555 87542904 87542903 87543125 222 TTCCTTTCTTTCCTTGCTTTTCTTTTCTTTCTTTCTTC----CTTCCTTCCTTCTT--------TCTTTCCCTTCCTTCCATCCTTCCTTCCTCCCT----TCCTCCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCTTTCCTTGCTTTTCTTTTTCTTTCTTCCTTCCTTCCCTCTTTCTTTCTTTCCCTTCCTTCCTTCTGTCCTTCCATCCTTCCTTCCTCCTTTCCTTTCTTTC chr4 + 94230402 85792637 85792636 85792862 85792637 85792636 85792862 226 TTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCT---GCCTTTTTCCTGTACATGTTTTTCATGTT---------TTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTTGATGTTTC ..:..:.:....:..:xx.x.........xx...::x.----:...x..:.x....--------.:.....:...::.xx.:::x::....x..x:.----.x...x....x:.....:::.:.---x....:..:..x.x.x..:.....x.x..---------...:.::.xxx..:x.....:.x.::.x.:..x..xxx:......x...:.:.:.......:.::xx.x.... 38M4I14M8I33M4I23M3D29M9D73M 132/210 62.9% 226/94230402 0.0% 28/210 13.3% 1750267 NA +3433 chr4 + 190214555 87543000 87542999 87543067 68 TTTCTTTCTTTTCTTTCCTTCTTTCTTTCCTTGCTTTTCTTTTTCTTTCTTCCTTCCTTCCCTCTTTC chr4 + 94230402 45957264 45957263 45957331 45957264 45957263 45957331 68 TTTTTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTC ...:.........:.....:......x::..xx.x:.x.....::..x.::.....x...:...:... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 41585736 NA +3484 chr4 + 190214555 87543007 87543006 87543095 89 CTTTTCTTTCCTTCTTTCTTTCCTTGCTTTTCTTTTTCTTTCTTCCTTCCTTCCCTCTTTCTTTCTTTCCCTTCCTTCCTTCTGTCCTT chr4 + 94230402 39929910 39929909 39929998 39929910 39929909 39929998 89 CTTTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTTGGCTTCCTTTCCTCTCCATGTCTTTCTCCCTCCCTTTTCAGTTCCT ........::x..:.x.:..xxx...x....:.....:...:.xx.......:.....::x.x......:.:::.::::...x..:.:. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 47613097 NA +3064 chr4 + 190214555 87543064 87543063 87543137 74 TTTCTTTCTTTCCCTTCCTTCCTTCTGTCCTTCCATCCTTCCTTCCTCCTTTCCTTTCTTTCCTTCTTTCCTTT chr4 + 94230402 76394490 76394489 76394563 76394490 76394489 76394563 74 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTCCTTTTTTTCTTTTGCCTCTGCTCTTT ..:...:x.:..:..::...:..:...:...:....:xx.:.:x:.......::..::...x.:...x::.... 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 11148574 NA +3149 chr4 + 190214555 87543112 87543111 87543192 81 CTTTCCTTTCTTTCCTTCTTTCCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTCCTTCCCTCCCTCCCTCCCT chr4 + 94230402 76521922 76521921 76522002 76521922 76521921 76522002 81 CCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTT .:..:......::.......x....x...x:....xx.:...:...::..x:..:.x.::.x...x:.x.:...:..x.:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 11021190 NA +3106 chr4 + 190214555 87550872 87550871 87550922 51 AGGATACAGCACTGGTCTTTTTTTTGTTGTTGTTGTTTGTTGTTTTCTTTT chr4 + 94230402 77610490 77610489 77610540 77610490 77610489 77610540 51 AGGAAACTCTACAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTT ....x..xx:..x...:........................x...x:.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 9940382 NA +3117 chr4 + 190214555 87552220 87552219 87552291 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCATGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x::.x......::.:..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 11519014 NA +3209 chr4 + 190214555 87565114 87565113 87565184 71 AAACTTAGAGTATAATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGTTACAAACAACTAAAACT chr4 + 94230402 7434171 7434170 7434241 7434171 7434170 7434241 71 AAACTTTGAGGAAAGTTAAAAAAGAAAGAAAGGAAAAACAAAACAAAGCAAAGCTACAGGAAATGAATATT ......x...x.x.:.x......:...:...:......x....x...:x....:....::x..:x..x.:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 80130943 NA +3735 chr4 + 190214555 87584946 87584945 87585015 70 CGTGGTGGTGCATGCGTGTAATCCCAGCTACTTGGGAGGCTGAGACAAGAGAATCACTTAAGCCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........--......:.:...........::........x.xx.x...x.....:.:.....:.. 12M2D56M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 11551749 NA +3027 chr4 + 190214555 87589894 87589893 87589970 77 CTGTGATCATTGAACTCTTTCTCTGCTGCAGATGCTGCTGTCTCAGTGTAACTTGTCTGTTACTCAGTGTAATTGGT chr4 + 94230402 22045811 22045810 22045887 22045811 22045810 22045887 77 CTGTGACCTTGGAATTCCACTACAGCTGCAGATAATGATTTTTTGGTTCAGCCTATTTGTTTCTCAGCATGATTGGT ......:.x.x...:..:x::x.x.........:x..x.x.:.::..x:.:.:.:.:....x.....::.:...... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 65544083 NA +3036 chr4 + 190214555 87611050 87611049 87611100 51 TGTGTGTGTGTGTGCATGTACATGTGTGTATATATGTGTGTGTGTATATAT chr4 + 94230402 86633924 86633923 86633974 86633924 86633923 86633974 51 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACAT ..x.:...:...:.:.x...:....x......:...:......:....:.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 977126 NA +3056 chr4 + 190214555 87614364 87614363 87614405 42 GACAGTGACAGCAGTGATAGCAACAGTAGCAGTGATAGTGAC chr4 + 94230402 88713157 88713156 88713198 88713157 88713156 88713198 42 GACAGCGACAGCAGTGACAGCGACAGTGACAGTGACCGTGAC .....:...........:...:.....::......:x..... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -1098793 -93131609 +3619 chr4 + 190214555 87617596 87617595 87617662 67 GTGGCGCGCGTCTCTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGC chr4 + 94230402 76033201 76033200 76033265 76033201 76033200 76033265 65 GTGGTGCACGTGT--AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ....:..:...x.--...:...........::........x.xx.x...x.:...........:... 13M2D52M 52/65 80.0% 65/94230402 0.0% 2/65 3.1% 11584395 NA +3200 chr4 + 190214555 87629192 87629191 87629263 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 11595986 NA +3065 chr4 + 190214555 87631339 87631338 87631398 60 CCAGCTACTCAAAAGGCTGAGCTTGGAGGGTTGCTTGAGCCCAGGAGTTGGAGGCTGCAG chr4 + 94230402 76033218 76033217 76033277 76033218 76033217 76033277 60 CCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........::...........::x.x.::x::.....:.....:..:.xx:.....:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 11598121 NA +3026 chr4 + 190214555 87644847 87644846 87644906 60 TATATATCTATATATATTCATATATATTCCATGTGTATATATACATGTATGTATCTGTAT chr4 + 94230402 27007378 27007377 27007437 27007378 27007377 27007437 60 TATAAGTCTGAATAAATTTATATACATTACATGTGTACATATACAAGTGCATGTGTGTGT ....x:...:x...x...:.....:...x........:.......x..:::.:.x...:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 60637469 NA +3003 chr4 + 190214555 87667349 87667348 87667401 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 64419627 NA +3127 chr4 + 190214555 87667364 87667363 87667404 41 TATATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.......................x.x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 83258282 NA +3025 chr4 + 190214555 87667366 87667365 87667409 44 TATATATATATATATATACACACACACACACACACACATACTTT chr4 + 94230402 4409082 4409081 4409125 4409082 4409081 4409125 44 TGTACATATATATATATATACACACACAGAGACACACACATTTT .:..:.............:.........x.x.......:.:... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 83258284 NA +3172 chr4 + 190214555 87675604 87675603 87675723 120 GTGGTGGCATGTGCCTTTAATCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGTCGGAGGTTGCAG----TGA-GCCA---AGATG---GCTCTA---CTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033201 76033200 76033328 76033201 76033200 76033328 128 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ......-..:...----..:.:...........:x........x.xx.x...x.:........x:.:..::xx:..:..:..----...-....---.....---..:...---....x.-.....x....... 6M1D6M4D65M4I3M1I4M3I5M3I6M3I6M1D13M 90/114 78.9% 128/94230402 0.0% 20/114 17.5% 11642403 NA +3644 chr4 + 190214555 87695222 87695221 87695333 112 AGAAAGAAAGAG--AGAATGAGAGAGAGAGAAAGAGAAAGAA----AGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..--.x.:x................:.x....----....xx:..:x:::.x.x:...:.x......:...:..:....::..::..x..------:...x.x...:...:.:. 12M2I28M4I54M6I18M 78/112 69.6% 124/94230402 0.0% 12/112 10.7% 36546843 NA +3516 chr4 + 190214555 87695226 87695225 87695337 112 AGAAAGAGAGAATGAGAGAGAGAGAAAGAGAAAGAAAGAA------AGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .......:::.::x.x.........:...........x.:------....xx:..:x:::.x.x:...:.x....:.:...:..:..:..:..::..x..------:...x.x...:...:.:. 40M6I54M6I18M 74/112 66.1% 124/94230402 0.0% 12/112 10.7% 36546847 NA +3680 chr4 + 190214555 87695262 87695261 87695390 129 AGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA---AGAAGAAAGGAGGGAGGGAG------GGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........:--...xx.x.....................x.:.::xxx....--::..x.:..x.x:..::.x:...:.:...:..:....:::..::.x.:x.---x....x.x.:...:......------....... 9M2D41M2I50M3I20M6I7M 88/127 69.3% 138/94230402 0.0% 13/127 10.2% 36546883 NA +3361 chr4 + 190214555 87695270 87695269 87695400 131 AGAAAGAAAGAG--AGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGGG-------------------AGGGAGGGGGAGGGAAGGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAA--------------ATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::..--.x...........:.........x....:xxx....xx:..--------------.x.:..x.x:..::.x:...:.:.....::::.........-------------------...:....:.x.x.xx....... 12M2I41M14D41M19I23M 84/117 71.8% 138/94230402 0.0% 35/117 29.9% 36546891 NA +3073 chr4 + 190214555 87695286 87695285 87695420 135 AGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGGGAGGGAGGG-----GGAGGGAAGGGGAGGGAGGGAGGGGAGGGGAGATG chr4 + 94230402 51148379 51148378 51148518 51148379 51148378 51148518 140 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGGCG ...:...::...xx.x.:.....:...:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:...:..:.::::.:.......x:.-----x..:.x.x.::.:::.:.:.x.x.xx......::. 100M5I35M 77/135 57.0% 140/94230402 0.0% 5/135 3.7% 36546907 NA +3117 chr4 + 190214555 87695313 87695312 87695400 88 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGGGAGGGAGGGGGAGGGAAGGGGAGG chr4 + 94230402 78784184 78784183 78784271 78784184 78784183 78784271 88 AAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGGTGG ..:.::..xx..::.....x...:x.:.:.....:..x:...x:..::....:.:.x..x:xx.......:.::....x..::..x.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 8911129 NA +3153 chr4 + 190214555 87695316 87695315 87695372 57 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAG chr4 + 94230402 83419839 83419838 83419895 83419839 83419838 83419895 57 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAAG ........x...:.:x..x::....:x....x...x..:..............:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 4275477 NA +3063 chr4 + 190214555 87695332 87695331 87695421 90 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGGGAGGGAGGGGGAGGGAAGGGGAGGGAGGGAGGGGAG------GGGAGATGG chr4 + 94230402 85790944 85790943 85791036 85790944 85790943 85791036 93 AGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGA---GAACAGAACATGGGGAGAAACCCAGAAGATGG .:....::xx...xx:......::...:........:....::.......:..x::.....---.:.x:..:x:x......------:.:...... 61M3D17M6I9M 60/87 69.0% 93/94230402 0.0% 9/87 10.3% 1904388 NA +3207 chr4 + 190214555 87720859 87720858 87720965 107 ACAATATCTAGAAATTCCCTAA---TTTCCTTTCCT-----------TCCTTCCTTCCTTCCTTTCTTCCTTCCTTCTTTCCTTCTTTCCTTCCTTTCTCCTTCCCTCCCTCCCTCCCTTC chr4 + 94230402 63998137 63998136 63998257 63998137 63998136 63998257 121 ATACTACCTATGATTGCCTTGAACTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTC .:.x..:...x:.x.x..:.:.---...........-----------.........x..x:.:....:.:.xx:.:......x......x::.:...x:....:xx:.:.x::..x..... 22M3I11M11I74M 72/107 67.3% 121/94230402 0.0% 14/107 13.1% 23722722 NA +3072 chr4 + 190214555 87720912 87720911 87720986 75 TCCTTCCTTCTTTCCTTCTTTCCTTCCTTTCTCCTTCCCTCCCTCCCTCCCTTCCTCTCTTACTTTTTCTTTCTT chr4 + 94230402 49829854 49829853 49829928 49829854 49829853 49829928 75 TTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT .::..x.::x....:......::...:.:.:......:.....:...:.:.:::.x.x.x:..x:...x...:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 37891058 NA +3095 chr4 + 190214555 87720925 87720924 87720999 75 CCTTCTTTCCTTCCTTTCTCCTTCCCTCCCTCCCTCCCTTCCTCTCTTACTTTTTCTTTCTTTCTTTTTTTTGAG chr4 + 94230402 7218317 7218316 7218390 7218317 7218316 7218390 74 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCC-CATTCTCTTCCCTAAGGTTTTTCCAG .:..:...::...:...x.....:..:.......:...:.....:.::-.x..:....:.:.xxxx.....:x.. 48M1D26M 51/74 68.9% 74/94230402 0.0% 1/74 1.4% 80502608 NA +3090 chr4 + 190214555 87720930 87720929 87720999 70 TTTCCTTCCTTTCTCCTTCCCTCCCTCCCTCCCTTCCTCTCTTACTTTTTCTTTCTTTCTTTTTTTTGAG chr4 + 94230402 35837067 35837066 35837136 35837067 35837066 35837136 70 TTGCCTTCTTTTCACCTCCTCTCTCTGTACCTCCCTCTCTCTCACATGCTCTTTCTTGCTCATGTTTGAG ..x.....:....x...:.:...:..x:x:.:.:::......:..x.x:........x..:x.x...... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 51883863 NA +3069 chr4 + 190214555 87742009 87742008 87742056 48 AATTTTTTAAAAAAATTTTAAAGAAGAAAAAGAAAAAAGAAAAAAAAA chr4 + 94230402 75225891 75225890 75225938 75225891 75225890 75225938 48 AATTTTTTTAAATGATGCTACAGAGGAAAAAAAAAAAAGAAAAAAAAA ........x...x:..x:..x...:......:................ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 12516118 NA +3157 chr4 + 190214555 87784499 87784498 87784592 94 TACATAAAGAGCAAGTTCAAAATTATTCCCTCGTCTGTCCATTTGTAGAAAAAGGTTTTTGTTTGTTTGTTTTTTCCTTCACTGTGGCTGGTAT chr4 + 94230402 6986339 6986338 6986432 6986339 6986338 6986432 94 taAATAGAAATCACATTCAAAATTGTTCCTTTTTTTTTCCCCCTAAAAGACAAGTTAATTTATTGCTTGTTTTCTCTTCACTTGTGCTTGGTAT ..x...:.:.x..x:.........:....:.:x.:.x...x::.:x.::.x...x.xx..xx...:.......:..:.:xx:....x:...... 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 80798160 NA +3032 chr4 + 190214555 87803346 87803345 87803407 62 TTGTGAGAAAAACAAACCATCCCTTAAATTTGTAAACAAAAAGGAAAATAACTAAAAAAAAA chr4 + 94230402 6758209 6758208 6758270 6758209 6758208 6758270 62 TTATGGGAAAAGTAAGCAATCAATCCAACTTTTAAAAGAAAAAGAAAATAAATAAAAAGAAA ..:..:.....::..:.x...xx.:x..:..x....x:....:........x......:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 81045137 NA +3099 chr4 + 190214555 87826377 87826376 87826427 51 ACAGTTTTTTTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTTTTTGCTAGAG chr4 + 94230402 77610500 77610499 77610550 77610500 77610499 77610550 51 ACAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCATTTGAG ....x.............x.....x.........xx.......:::.x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 10215877 NA +3130 chr4 + 190214555 87856628 87856627 87856680 53 CTGTAAAAACAAACAAACAAACAAAAACACAAGAGCAGAGCTTCAGGGACCTA chr4 + 94230402 7459204 7459203 7459256 7459204 7459203 7459256 53 CTTTAAAAACAAACAAACAAACAAAAACACATGGTTATAGCCACATGTACCTA ..x............................x.:x:.x...:x..x.x..... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 80397424 NA +3116 chr4 + 190214555 87899269 87899268 87899341 73 TGTGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATTGCTTGAGCCCATGAGATTGTGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....x.:...........::........x:xx.x.:.x::.....:....x:..x..xx.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 11866064 NA +3048 chr4 + 190214555 87916343 87916342 87916404 62 GTGTGTGTATATATATGTGTGTATATATGTATGTATACATATATATATATAAAATCTTCACA chr4 + 94230402 83316558 83316557 83316619 83316558 83316557 83316619 62 GTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAATCTGGACA ...x:..x:x:...:...........:.x......:.....:...:...x::.....xx... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 4599785 NA +4286 chr4 + 190214555 87927672 87927671 87927915 244 ATTTTTATACCTTTAATCATCTATCAATCATGTCTTTCTTCCTTCCTTCCTTCCTCCCTTCCTCCATTCCTCCCTCCCTCCCTCTGTCTCTTTTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTCTCTT-TCTTTTCCTTCTCTCTCTCTCT chr4 + 94230402 19215331 19215330 19215566 19215331 19215330 19215566 236 ATTTTTAT---TTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCC----------CCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTT-TGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ........---....x.:x::.:.:...:...xx.x.:::x...:.x..:..:xx.x:x.:....x.xx.x...x.xx:...:.:x..:.----------.:.:::....:.:...:...xx....xx.xx......x..::...x......xxx....x.x..::::xx:....:.:.x.......-.x:.x.:....-----:.:....xx:..:.....x:...-.x....:..x::....x..... 8M3D79M10D87M1D11M5I23M1I22M 143/230 62.2% 236/94230402 0.0% 20/230 8.7% 68712341 NA +4019 chr4 + 190214555 87927706 87927705 87927861 156 TTTCTTCCTTCCTTCCTTCCTCCCTTCCTCCATTCCTCCCTCCCTCCCTCTGTCTCTTTTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTAT---------CCGCCCACTTTTGCATTGTTCTTTCT-GTTCTTTGTATTCATTTTTGTCTTC--TTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .....x:..:x..x.::....::......::..---------..x...x..x.:x.x..x........-x......x.x..:x...:.x....:--..........:----.::x.:.:.::x:......x::.:...::.....:...::.:.x..... 33M9D26M1D25M2D11M4I49M 97/144 67.4% 148/94230402 0.0% 16/144 11.1% 37751439 NA +4252 chr4 + 190214555 87927722 87927721 87927865 144 TTCCTCCCTTCCTCCATTCCTCCCTCCCTCCCTCTGTCTCTTTTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ..:..x:..:x..x.x:....::..:...::x..:.:.:x:....x.x..x.::..::.x:.....x.x.::x.:...x.:.............:----.::x.:.:.::x:......x::.:...::.:.....:..:.:.x..... 95M4I49M 87/144 60.4% 148/94230402 0.0% 4/144 2.8% 37751455 NA +3075 chr4 + 190214555 87927761 87927760 87927842 82 CTTTTTTCTTTCTCTTTCTT--TCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ......::.....:x.:.:.--:...:....::....xx:.x:.x.:.........:...::...x.....x..xx:.x..... 20M2I62M 56/82 68.3% 84/94230402 0.0% 2/82 2.4% 30555735 NA +3675 chr4 + 190214555 87927765 87927764 87928003 239 TTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-----TTTCTTTCTTTCTCTCTTTTTCTTT---CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTTCTCTCTCTC-------TCTCTCCCTTTCTCTTGCTTTCTTGCATTCTTTCTGGCTTTCTTGTTTTCTTTCTTGCTTTCTTGCTTTTTTTTCACGGGGTCTCATTCTG chr4 + 94230402 63925462 63925461 63925713 63925462 63925461 63925713 252 TTTTTTTCTCTGCCTTTTTTGTTCATTCTTTTTTTCTGTTCTTTTAATTGTAGGCTGTTAATTTTTGGCTAGATTTTCCTACTTTCTCTGACTTTATTTTGACTGTCTTTATTTTGTACCTTTTCACTTCCTGAGTTCAATTTCAATATCTACTTTAGTGTAACCTTTTCCTTTCTGTT-CTCTGTT-CATTTGTACCCATATTCCTGAATTCTATCCATTATTCTCTTTACCTCTACACTGGAGTTGCTTTTG ...:.......x:....:.:x...x......:.....x......:xx.:x.xxx:.x..xx...:.xx.-----....:.x........xx:...x...---..x.....x...:x.x.:..:.:x...:..xxx..:xx....xx.x...x::.:-------:..:.:.......x..-..:.x..-....:x.x.:x::x...:..xx....x..:xx:x....:x:.x::.:.x...x..:x:.xx..:.. 69M5I25M3I54M7I16M1D7M1D66M 146/237 61.6% 252/94230402 0.0% 17/237 7.2% 24002303 NA +3096 chr4 + 190214555 87927767 87927766 87927847 81 TCTTTCTCTTTCTTTCTCT---TTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.....:..::.x..:..---:..:....::....xx:.x..x.:.........:...::...x.....x..xx:.x...... 19M3I62M 56/81 69.1% 84/94230402 0.0% 3/81 3.7% 30555740 NA +3106 chr4 + 190214555 87927767 87927766 87927846 80 TCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326949 83326948 83327028 83326949 83326948 83327028 80 TCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .....x.......xx.:.::.:.:.:.:......x..:xx:...x.::..x:x.:.....x.....::..::.:...... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 4600818 NA +4075 chr4 + 190214555 87927770 87927769 87927936 167 TTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTTCTCTCTCTCTCTCTCCCTTTCTCTTGCTTTCTT chr4 + 94230402 28328430 28328429 28328596 28328430 28328429 28328596 167 TTTTCTCCCTGTCTATTGTTCTCTGCTTCCAATGTTTTTCCATTTTATATTGTCTGTTTCTCCTTTTATGTTTTGATTTTCATTTATTCTACTTTTTCTCTCCACTTTAATTTTTTTCTTCCTTACATTTCCTACTCACTTATTTCCTTCACCTATTTTGGCTTCTT ..:...::..x...x..x:.:...x::.::xx.x.:....:x.:..x:x..x.:.x.....:::...x.x.:..xx.:.::x...x..::x:.:.....:..:x::..xx...:.....::...x.x......x...x..:x:.::..:.x::.x.:...x:..... 167M 96/167 57.5% 167/94230402 0.0% 0/167 0.0% 59599340 NA +3014 chr4 + 190214555 87927773 87927772 87927871 99 TCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC ...x.:.:.........:.:x.xx.....:x..::x:...:..x.:x.xxx.:..x..x::x..x..x::::....x.:...:..:...:......... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 57396561 NA +3513 chr4 + 190214555 87927774 87927773 87927892 119 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTCTCTTTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTT--TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:::..:.xx.x...--.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x..:...:x.xx.......:.--.:.::..........:....:.x.:. 26M2D39M4I26M2I26M 79/117 67.5% 123/94230402 0.0% 8/117 6.8% 24230657 NA +3678 chr4 + 190214555 87927774 87927773 87927891 118 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTC chr4 + 94230402 2692248 2692247 2692364 2692248 2692247 2692364 117 CCTCCTTCCTCTTCCTCCATTAATTGCTTTCTGATTAGTCCCCATTTCTTTCTATATTTTCTGCTTACAGTGCATTTTTTTCTTTGTTTCTTTC-TCCATCGTTTCCTTCTTGCTCTC .:.:...:.....:..::x..xx..x....::xx.:xx..:::x.........x.x...::.x...x.xx.x:x.:.........x........-.:.x.:x....:.....x..... 94M1D23M 77/117 65.8% 117/94230402 0.0% 1/117 0.9% 85235526 NA +3082 chr4 + 190214555 87927778 87927777 87927860 83 CTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCT chr4 + 94230402 11873174 11873173 11873256 11873174 11873173 11873256 83 CTTTCCTTTTCTTTCCCTCTTTTTTTCCTTCCTGTTTCCATTGCAGACAATTTTACCTTCATGTTTTTTTTTTTTTTCCTGCT .....::........::.....:...:...:..x.:.::x..x.xxx.xx.:..x.:...x.x:...:.:.:......:.x.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 76054604 NA +3748 chr4 + 190214555 87927784 87927783 87927903 120 CTTTCTTTCTTTCTTTC----TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:..:----.x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:.:x.xx......--...::.:.::.....:....:.....:x.. 17M4I71M2D30M 78/118 66.1% 122/94230402 0.0% 6/118 5.1% 24230667 NA +3804 chr4 + 190214555 87927788 87927787 87927913 126 CTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC---CCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx...:.x.:..xxx:::..x....:.:x.xx.......:..---.:......::....:.:..:.:.x.:. 96M3D27M 77/123 62.6% 123/94230402 0.0% 3/123 2.4% 24230671 NA +4035 chr4 + 190214555 87927792 87927791 87927909 118 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTTCTCTCT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ....x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx:::..x....:.:x.xx.......:..:.:::..:.:..:....::.:. 118M 73/118 61.9% 118/94230402 0.0% 0/118 0.0% 24230675 NA +3248 chr4 + 190214555 87927795 87927794 87927900 106 TCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTC chr4 + 94230402 32895598 32895597 32895707 32895598 32895597 32895707 110 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTC ...x...::........:..x.:...:::.x.:x:.:...x.x...::.x..xx:.:.x..----.:..:.:x::.:.:...x:.x......x............xx... 61M4I45M 68/106 64.2% 110/94230402 0.0% 4/106 3.8% 55032197 NA +3004 chr4 + 190214555 87930752 87930751 87930808 57 GGAGGGAGAGAGGAAAGGAGGGAGGGAGGGAGGAAAGGAGAGAGGAAGGGAGGGAGG chr4 + 94230402 24873250 24873249 24873306 24873250 24873249 24873306 57 GGAAAGTAAGGGGGAGTGACAAGGGGGGGGAGGAAAGGAGCGGGGAAAAGAGGGAGG ...::.x:..:..:.:x..x:::...:.............x.:....::........ 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 63057502 NA +3846 chr4 + 190214555 87934341 87934340 87934418 78 TCCAATCTTTTAGCTTCCCTGGGCCACACTGAAAGAAGAGTTGTCTTGGGCCACACATAAAA----CACACTAACACTAATG chr4 + 94230402 65178290 65178289 65178371 65178290 65178289 65178371 82 TCCAACATTTTAGCTTGCTTGGGTTGCACTGAATGAAGAGTTGTTTTGGACTGCATACAAACaggtcactctgaaagtaatg .....:x.........x.:....:::.......x..........:....:.::..:.:...x----...x..:.x.x..... 62M4I16M 59/78 75.6% 82/94230402 0.0% 4/78 5.1% 22756051 NA +3062 chr4 + 190214555 87934422 87934421 87934468 47 GCTGATGAGCTAAAAAAAAAAAAAATCACAAAAAAAATCTCATAATG chr4 + 94230402 39460037 39460036 39460083 39460037 39460036 39460083 47 GCTGAAGTGTTAAAAAAAAAAAAAATCACACAAAAAAACCCAAAATG .....x.x.:....................x......x.:..x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 48474385 NA +4265 chr4 + 190214555 87940726 87940725 87940910 185 CTGTCCACACTTTCTTCTTAGGAGTTAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAAATCCCTAGGGAATTATTCTTATTTCAGATCACTGAAAACAGCACAAG----CATATTTTTTAAGTGTAGAATTGTCCAAAAG----AAATTCTATAAAAAG-----TGGTTTCTATTTTTTTTG chr4 + 94230402 29520056 29520055 29520255 29520056 29520055 29520255 200 CTGTGTTCACCTTCTTTTTTGTTGATAAAAGCAAATAAAGAGAAAAAAGAAAAAAAAAATGAAACCAATGATATAAAAACCTGGTGAATGTTTACCCTTCATGATCACTTAGAAATATGCAAAATTTCACAAGATACAAGCCTAGTACAGTCCATGTGTATCAAATCATAGAAAAAAAATACTGACTACTTTTTTTTTTG ....x:x...:.....:..x.xx.x.....--...x...:.:......:..........x:...xx..x....:...xx...:.x....xx..x::x..:xx.......x.:..xx:::...:----..:.xxx.x:...:x...x.:x.....x:x.----....:x..x.....:-----..::.x..x......... 30M2I91M4I31M4I15M5I18M 123/185 66.5% 200/94230402 0.0% 15/185 8.1% 58420670 NA +3165 chr4 + 190214555 87968364 87968363 87968433 70 CTTTTGTTGTATGGTTATTTGGGTTTTTGTTTTTGTTTTTTGTTTTTTTCTTTTCATTTTAACCAAGTTT chr4 + 94230402 3272670 3272669 3272739 3272670 3272669 3272739 70 CTGTTGTTGTGGGTTTGGTTGGTTGGTTTTTTTTGGTTTTTTTTTTTTTTTTTCCACTATAAGCCAGTTT ..x.......:x.x..:x....x.xx..x......x.....x.......:...:..:.x...x.x..... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 84695694 NA +4025 chr4 + 190214555 87971049 87971048 87971131 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCACAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:...........:.........x.x::x...x.:...........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 11937852 NA +3123 chr4 + 190214555 87972536 87972535 87972627 92 TTTTGTTGTCTAAGCTATTGAGCAATGGAATAAAAGAGTTTATGGTGTTTTTGTTTTTTTTTTTTTGTATTTCTGAAATGCTCTAATTTCAT chr4 + 94230402 37380259 37380258 37380347 37380259 37380258 37380347 89 TTTTTTTTCTTAAGGAACTGTTCAGTTGAATAGAACTGTTTTTTGTGTTGTTGTTTTTTTTTTTTTTTA---ATGAATTGTTTTGGATTTAT ....x..x::....xx.:..xx..:.x.....:..xx....x.x.....x................x..---x....x..:.:.::x..:.. 69M3D20M 63/89 70.8% 89/94230402 0.0% 3/89 3.4% 50592277 NA +3225 chr4 + 190214555 88024327 88024326 88024399 73 TGCACCTGTAATCCCAGCTACTTAGGAGGCTGAAGCACAAGAATCACTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:..........:::.......:x.x::x...x..........::.:.:x:xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 11991122 NA +3341 chr4 + 190214555 88025621 88025620 88025732 112 AAAAAAAGAAAAGAAAAGAAAAATAAATAAAATTTATTCAAATACAAAAGTGATGTGGTTTGACTCTGTG--TTGCCACCCAGATCTCATC--TCCAAT--TGTAATCCCCGTGTATT chr4 + 94230402 35711639 35711638 35711756 35711639 35711638 35711756 118 AAAAAAAGAAAAAAAAAGAAAATCACACCAAAGTTCAGCAAATTCAGAAGTGGTAACATTTGACTCTTTGCATTACATGCAATAGTTAATTAATCCAGTGCTCTAACCCACGTGTATT ............:.........x:.x.:x...x..xxx.....x..:.....:.:xx:.........x..--..:.xxx.x.x.x:.x..:--....:.--.x...:..x........ 70M2I19M2I6M2I17M 80/112 71.4% 118/94230402 0.0% 6/112 5.4% 52313982 NA +3026 chr4 + 190214555 88056965 88056964 88057006 42 TGGGGTTTTTTTGTTTTGTTTTTTTTTGTTTTGTTTTGTTTT chr4 + 94230402 27280219 27280218 27280260 27280219 27280218 27280260 42 TGGAGTTTCTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTT ...:....:........x.x...x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 60776746 NA +3433 chr4 + 190214555 88068330 88068329 88068413 84 CATGGTGGTGGGCACCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCGGGAGGCGGAGGTTACAGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::......--...x....:.:.:.........::........x.xx.x...x::.........:.:..x:xx:..:.::... 10M2D72M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 12035133 NA +3129 chr4 + 190214555 88071489 88071488 88071560 72 TTGTCTTTTTTTTTTTCTTCTTGTGTATGGGAACATTTTCCTGTTTTTTTGTTTTGTTTTTTGTTGTTTTGT chr4 + 94230402 26947409 26947408 26947480 26947409 26947408 26947480 72 TTGTCTTTTTTTTTTTCTTCTGTGATATAAGAGATTTCCCCTGCTTTTTTCCTTTTTTATCTTTTAGTTGGT .....................xxx:...::..:xx..::....:......x:...x..x.:.x..:x..x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 61124080 NA +3347 chr4 + 190214555 88071499 88071498 88071581 83 TTTTTTCTTCTTGTGTATGGGAACATTTTCCTGTTTTTTTGTTTTGTTTTTTGTTGTTTTGTTTTGTTGTTGTTGTTGTTGTT chr4 + 94230402 83667092 83667091 83667174 83667092 83667091 83667174 83 TCTTTTCTTTGACAGTACTGGAGCTTTTTTTTGTTTTTCTTTTGGTTTGTCAGTTGTTTTCTGTTGTTGATGTTGTTGTTTTT .:.......:xxxx...:x...:.x....::.......:.x..xxx..x.:x........x.x......x..........x.. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 4404407 NA +3630 chr4 + 190214555 88073386 88073385 88073455 70 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTACGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.........:--......:.........:.::........x.xx.x...x..........:.x:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 12040189 NA +3278 chr4 + 190214555 88086872 88086871 88086945 74 GTGCACCTATAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCACTGGAGCCTGGGAGATCGAAGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:.........:.::........x:xx.x.:.x....x..:..::.:..x.:x::....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 12053668 NA +3364 chr4 + 190214555 88087723 88087722 88087804 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCACCTGAACCTGGGAGGCTGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::........x.xx.x...x...:......::.:..x:.x:..:..::. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 12054522 NA +3350 chr4 + 190214555 88100374 88100373 88100445 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCGCTTGAACCCGGGAGGTAGAGATTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........xxxx.x...x.:.........:.:..x.xx:.::..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 12067168 NA +3202 chr4 + 190214555 88115192 88115191 88115299 108 TTCTTCCCACGTAATTTTACCCTTTCTTTTTATATATTCAGTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATAATTTATTTATTTATT chr4 + 94230402 4618320 4618319 4618427 4618320 4618319 4618427 108 TTTTTGCCCTATATTGTGGCTGTTTTTCTTTCT-TGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT ..:..x..x::..x.x.x:.:x...:.:...x.-.:.x.xx.x.......::..............::x...::......x.x......-....:x.xxx....x.... 33M1D55M1I19M 73/107 68.2% 108/94230402 0.0% 2/107 1.9% 83496872 NA +3236 chr4 + 190214555 88115214 88115213 88115302 89 TTTCTTTTTATATATTCAGTCTCTCTCTCTCTCTCTCTCTCT--CTATATATATATATATATATA-TATATATAATTTATTTATT-TATTTTG chr4 + 94230402 4618345 4618344 4618435 4618345 4618344 4618435 91 TTCTTTCTTGTGCCTT--ATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTG ..::..:..:.::x..--:.......::..............--....::......x.x......-....x...xx....x....-...x... 16M2D24M2I21M1I19M1I7M 68/87 78.2% 91/94230402 0.0% 6/87 6.9% 83496869 NA +3118 chr4 + 190214555 88115224 88115223 88115299 76 TATATTCAGTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATAATTTATTTATTTATT chr4 + 94230402 22187350 22187349 22187425 22187350 22187349 22187425 76 TAAATCTTGTTTCTCACTTTTCTTTTGAATAAGTAAATGTGTGTATATATATATATATGTAATTTACTCATTTATT ..x..::x..:....x..:.:::.:.xxx.xxx..x..:.:.:...............:.......:.:....... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 65927874 NA +3077 chr4 + 190214555 88115233 88115232 88115298 66 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATAATTT---ATTTATTTAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x.............x.:.......:.:....:.:.:.:::.:.x..:---..x:...... 56M3I10M 49/66 74.2% 69/94230402 0.0% 3/66 4.5% 27283703 NA +3631 chr4 + 190214555 88165734 88165733 88165816 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........:.::........x.xx.x...x.:.........:.:..x:xx:..:...:. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 12132537 NA +3613 chr4 + 190214555 88168347 88168346 88168429 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........::::........x.xx.x...x.:...........:..x:xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 12135150 NA +3264 chr4 + 190214555 88169971 88169970 88170040 70 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--...:.x......:.........:.::........x.xx:x...x::.........:.:.. 8M2D60M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 12136774 NA +3567 chr4 + 190214555 88181260 88181259 88181342 83 CATGGTGGTGCGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......::.--....:.:.:.........::........x.xx.x...x::...........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 12148063 NA +3828 chr4 + 190214555 88182956 88182955 88183027 72 GCACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::.:........x:xx.x...x.............:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 12149750 NA +3177 chr4 + 190214555 88183098 88183097 88183168 71 AAAAAAAAAAAAAAAAAAAGTGGAAAAACTTCAAATAAACAACCAAACTATGCATCTTAAAGAACTAGGAG chr4 + 94230402 39747391 39747390 39747461 39747391 39747390 39747461 71 AAAAAAAGAGAAAAGAAAAAAGGAAAATTTTCAAATTAACAATTGAACTACAAAGGTGACAAAATTAGTAG .......:.:....:....:x......x:.......x.....:::.....::x.xx.x.x.:..:...x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 48435707 NA +3019 chr4 + 190214555 88192379 88192378 88192428 50 TCAATGAAGCTATTTTCCCTTCCCTTTCCTTTTCCCTTTCTTTTCCTTTT chr4 + 94230402 7603986 7603985 7604035 7603986 7603985 7604035 50 TCATTGGAGCTAACCTTTTTCCTCTTTCCTTTTCCCTTTCCTTTCTTTTT ...x..:.....x::.:::.:.:.................:....:.... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 80588393 NA +3613 chr4 + 190214555 88203614 88203613 88203696 83 CGTGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 12170417 NA +6232 chr4 + 190214555 88206429 88206428 88206551 123 AAAATGATAGTTGGATGCCATGAAGTAGGTGGCAATGCCTTAACTGTGTGCTTGTTGTCAGGCCCG----AGGGCCTCTTCCATCCTTGTCAAGAGAAGTGTTAACCTTCTGTCCTTTCATACAACA chr4 + 94230402 45615199 45615198 45615325 45615199 45615198 45615325 127 aAAAACATGGTTAGATGCCATGACGTAGTTGGCAGTGCCTTCACCGCATGCATATTGTACGGTCCAGGCTAGGGCCTGTTCCATCCTTATCAAGGGGAACACTCACCTTCTCACGTTTCATACAATA ....xx..:...:..........x....x.....:......x..:.::...x.:....xx..:..:----.......x..........:.....:.:.::::.x.......xx.x..........:. 66M4I57M 93/123 75.6% 127/94230402 0.0% 4/123 3.3% 42591230 NA +3418 chr4 + 190214555 88209659 88209658 88209735 77 AAAAAAAAACAAAAAACAAAACAAAAACAAAAAACAAAGTTCATACCTCTTTCTATAAGTAAAAAATAAAAATTTTA chr4 + 94230402 23458947 23458946 23459022 23458947 23458946 23459022 76 AACAAAAAACAAAAAACAAAACAAACAAAAAAAGCAAAACCCATG-CTATTCATATATATATGAGCCAAAAATCTCA ..x......................x.x.....:....:::...:-..x..:x....x:..x:.:x:......:.:. 45M1D31M 56/76 73.7% 76/94230402 0.0% 1/76 1.3% 64750712 NA +3061 chr4 + 190214555 88210192 88210191 88210236 45 CACACACACACACACACACACACACACACATATACATATATACGT chr4 + 94230402 74526077 74526076 74526121 74526077 74526076 74526121 45 CACACACACACACATGAACATACACAAATATATACGTATATATGT ..............::x...:.....x.:......:......:.. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 13684115 NA +3366 chr4 + 190214555 88214949 88214948 88215034 86 ATGCAACATGGTGCACACCTGTAGTCCCAGCTATATGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGACGTTGAGGTTTCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..xx:........:--......:.......:x..::........x.xx.x.:.x.......:.....:.xx..x:..:.x:.. 17M2D67M 59/84 70.2% 84/94230402 0.0% 2/84 2.4% 12181755 NA +3176 chr4 + 190214555 88231870 88231869 88231924 55 ATTTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578265 26578264 26578319 26578265 26578264 26578319 55 ATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ......................:.:.x.x.x.xx..:...:...x...::..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 61653605 NA +3474 chr4 + 190214555 88251882 88251881 88251955 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCTGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.:x.x...x::.........:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 12218678 NA +3583 chr4 + 190214555 88258498 88258497 88258570 73 TGCACGAGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTAAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.....:.........:x.:........x.xx.x...x.:...:.......:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 12225293 NA +8660 chr4 + 190214555 88262590 88262589 88262788 199 GGTAATCAGGCCCATCGTCCACTGGAGGCAAAGCTTCTGCTGAATGAGAAGTTGATTTCAGAGTTCTTATATTTTCCCCAGGCACCAAAAGGCACTACTACTGCAGTACTGTTATCCTCAGTACCGTACTGTATTGCCTGCAAGGTTTGGCAGGAAGAAAGAGAAAAACATTGGAAATCACAGTC---TATACAAAGAGAAA chr4 + 94230402 48451544 48451543 48451731 48451544 48451543 48451731 188 GGTCTTCACGCCCACCTCCCACTGGAGGCAAAACTGCGGCTGAAGGAGAAGTTGATCTCACCATTTTTATACTTTCCCCATGCTCCAAATGGCACTATGACAACCGTGCTATTATCTTCAGTGCCGTACTGCATTGCCT--------------GAAGGAAGAAATAAATTGTCAGCATCACGGTCCTGCTCAGAAAGGGAAA ...xx...x.....:.x:..............:..x.x......x...........:...xx:..:.....:........x..x.....x.......:x..x:.x..:..:.....:.....:........:.......--------------....:....:.x...:xx.x::x.....:...---:x:.x....:.... 139M14D32M3I14M 140/185 75.7% 188/94230402 0.0% 17/185 9.2% 39811046 NA +10452 chr4 + 190214555 88264985 88264984 88265142 158 AGAAGCTCTGG-GTCACCTGTTCAGTCACCGCATGGGCTGCTTCGTTGGGATCATGGCACTGATTGACAAAGTCACAAATCTCTTGACTATTCACCATGAAGTTAATTCCATCTGTGGTGAGGACCAGGAAGCTGTCATCAGCATGATGTAACTGCAAT chr4 + 94230402 48451983 48451982 48452141 48451983 48451982 48452141 159 AGAAACCCTAGCATTACCTGCTCAGTAACAACGTGGGCAGCTTCAGCAGGATCGTGGCACTGGTTGATGAAGTCGCAGATCTCCTGACTGTTCACCATGAAGTTAATGCCATCTGTAGTAAGGACCAGGAAGCCGTCATCTGCATGATGCAACTGCAAT ....:.:..:.-:.:.....:.....x..x:.:.....x.....:x::.....:........:....::.....:..:.....:.....:.................x........:..:.............:......x........:......... 11M1I147M 129/158 81.6% 159/94230402 0.0% 1/158 0.6% 39813002 NA +15486 chr4 + 190214555 88268175 88268174 88268930 756 CAGGTCCTTTCTTACCTTAATCCTCTTAGTTTCAGGTTCTGCTATGACACCACTGGTCTTAAGGTCCAAATCTCCAATACTTCTTGTCATTGCAAGCCTGCCATTTACGTGAGGCTGCCCCAAACTATTCCAAGCTACAAAACCACCACATTTCTTGATCCTGTTAA--------------------AAGTTAAATGACAA-------------------------------------------------TGGTGTGATATGT--------------------AGAAAACCCTTTGGGAGG---CCAAGGAGGGCAGATCACGAGGTCAGGAGATCGAG-ACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAC------AAAAAATTAGCCGAGC-----------GTGTTGGCAGGCGCCTGTAGTCCCAGCTACTCAGG--------------------AGGCTGAAGCAGGAGAATGGTGTGAA--CCCGG-----GAGGTGGAGCTTG--CAGTGAGCCAAGATTGCGCCACTGCACTCCAGCCTGGGCGA-------CAGAGTGAGACTCTGTCTCAAAAAAACAAAAAGAAAACCAAGTCACTGTTAAACTTAACCATGACATCAGTTTAAAAACTATTATGAACTAAAAACATCATCCACATAGAATGATATGATGGATCAGTGGTGGTAGTACCTTTCTTTTTCATCTTTTCTTTCTGGAGTATGGTCAATGGTCAGCTTCATGGGTTTTCCTTTTCTACACAAAATAGCCCGGCTGTCCCCAACACTGGCTACAACCAGTTCAATACCATCTCGCAATAGGGCTACTGTTGCAGTAGTCCCAGAGGTCAGAAGAGTTGCTACAAGTATTATGAAAAAAAGAG chr4 + 94230402 48453067 48453066 48453909 48453067 48453066 48453909 843 CAGGCTTTCTTTTACCTGAACCCTTTTTGTTTCTGGCTGGGCTATCACACCACTGCTTTTAAGATCCAAATCTCCTATGCTCCGCGTCATTGCAAGTCTACCATTCACATGAGGTTGTCCCAAACTGTTCCAGGCAACGAAGCCACCGCACTTCCTAATCCTGTCCGGGGGCACAAGAGAGAAAGCGAAGATGAGTTACAGATTCAGACCGTTCCCCCTGTCTGTAGCTGCAGTTTCTGCCACTATCTGCTGATGTGAGATGGGGTACCAAGGACCTGAGCTGAGAGGGCCTGTTTGAAGGGTTCCACAGAAGGTATA----GGATTTAGAGGGCTGAGTGCTGCCCTGGGAACTACAGC-ACACTTCTTCACATCTTGGATATCCCTTGGAACTCTTGGATGAGTCTTTGAGCCATGTGATCTCAGTTCCC---AGTCCTAGCTCTGCTGGTCTTACTACAGTGACAGTTTATGCTCACGTAGGA---CTTTATAAATCCCCAGTTCTTGAAATGGAAATAAATTAATTAACAGGGGCTGTGCCACTTT-TTCCAGCTTGGGCTGTTACGTTCAGCTCTAGTCTTTTTCCCAG--------------------------GTCCGACCTGGCAGCAGCA-CAGCCTGACAGAGGCCAT---------------TCCCCAGAAAGCCACAACACAAGCCAACAG-----GTACCTTTCCTTCTCCTCCTTCCTTTCTGGTGTATGGTCAATGGTGAGTTTCATGGCCTTTCCTTTTCGACACAGCAGGGCACGGCTGTCACCCACGCTTGCCACTACCAGCTCGATACCATCCCGCAGCAGGGCCACCGTTGCAGTGGTCCCAGAGTTCATCAGAGTTGCTACAAATGTCATATCAGAGAGAG ....:::.:.:......x..:...:..x.....x..:.xx.....x.........x.:.....:...........x..:..:.x:...........:..:.....:..:.....:..:........:.....:..x..:..:.....:..:...:.:.......:x:--------------------...x.:.:.x...:-------------------------------------------------..:.....x...x--------------------...:::..:x..x.:...---...x:..:..:.x.----.::x.:..::.:::...-:.:::.....xx.x:..:.:-.x..::.x..x.xx..x::.x.:------:..xxx..:.x:...:-----------...x.xx...x:x..---.....:....x:x.x..--------------------.x...x.x.:....---:xx.:.:..--...:.-----..::....:x.x:--:.:.x.:.x::.::..:......x:-:......:.....x:-------...xx:x..x..:.x..:..:--------------------------..:x:..:.::.x::::..-...::.:.x.:xx:::..---------------...x..x.:.::x.:.xx.:::::..:::.-----.........:..:..x..:..:........x..............x..:.......x:..........x.....:x.x:..x........x..x..:..x..:..x.....:..:........:....::.....:..:........:.........x...xx.............:.:.:..:xx.:.:.... 167M20I14M49I13M20I18M3I14M4D17M1I20M1D23M6I16M11I15M3D17M20I14M3D9M2I5M5I13M2I25M1D15M7I21M26D19M1D18M15D30M5D194M 467/697 67.0% 843/94230402 0.0% 205/697 29.4% 39815108 NA +25991 chr4 + 190214555 88270860 88270859 88271319 460 TGCTAAGC-ATTTAAGAATGTAAA----TATTAAATCAGCATTCATTTTCATTTAACATTTAACATGGAAGTAAAAATTCTCACTTTTTGCCTAACAACAAAACTAGAAAACTAAGACATCTTTCAATAAGTTCTTAACACTCACTGGACAATTTCTACTGCAAGTCATCTCAACTAATGGGACAAAGAG-ATGTGGGAACCTTCCCGTAGTCCAGGATAGGAACCGCTGGACTCCTTCACCTGGGACAAAATTAAGCAGATCTCTCTTTCCACTGAAGCCCCGCATATAGTGTCCACGGGCTCCAGGTCTAGAGCTGCTGACCAGGCACAGTTCTCTGCCACAAATAACACG--CACAGAGGCAAATACGAATTTCACCCAGGAATTGTGCTCAAACATTACAAACCTGCAACACAGGGGAGAGCAGAGAAAGAGCTGCAAAATAAGGGAAGGGTTTTTTATTTTGG chr4 + 94230402 48456525 48456524 48456978 48456525 48456524 48456978 454 TGCTAGGTTATTTAATAACACAAAAATATATTGCATCAGCACGTGTACTCATTT-----TTAAAATTAAA---AGAGTTTATCTTGTTTACCTAACAATATCACTATAAAACTAAGA--TCTTTCAATAGGTTCTTAACACTCACTGGACACTTTTTACTGCAAGTCATCTCAACTAATGTGACAAAGAGGATGTGGGAACCTTCCAGTAGTCCAGGCTAGGAACCGCCGGACTCCTTCACCTGGGACAAAATTAAGCAGATCTCTCTTTCCACTGAAGCCCAGCATATAGTGTCCAGGGCCTCCAGTTCTAGAGCTGCTGACCAGGTACAGTG-TCTGCCACAAATAACACGTACACAGAGGCAAATAGGAAATTGACCCAGGGACTTTGTTCAAACAAAATAAACCTGCAACACTGGAGATGAAAGGACAGGGGCTGCAAAACAGGGCACG---TAGTCATTTTGG .....:.:-......x..:::...----....:x.......:x::.x:......-----....x..x:..---.:.:..:x:x:.x...:........:.xx....x..........--..........:.....................x...:........................x.........-...............x..........x..........:.....................................................x..............x..x......x...................:.....x-..................--..............x...x..x.......:.:.x..:.......xx.:.............x..:..x::x..::x.:.:.........:.:..x.x.---.xx.:....... 8M1I15M4I26M5D11M3D44M2D71M1I143M1D18M2I98M3D12M 375/446 84.1% 454/94230402 0.0% 22/446 4.9% 39814335 NA +4234 chr4 + 190214555 88271953 88271952 88272046 94 AAATGGGTATTTCTGCAGCTCTCTCTTTCCCCCAGTGTTGCAGGCCGACACA-TCAAAAGAAAAATGATCAAGATTGTGAATGCCAACATAAAGA chr4 + 94230402 48457453 48457452 48457547 48457453 48457452 48457547 95 AAGTAGCCATTTCTGCAGCTCTCCCTTTTCCTCAGTGTTGCAGGTTAACATAGTCAAATTAAAAATAATCATATGTTCAAACAATAACTTAAAAA ..:.:.x:...............:....:..:............:::...:.-.....xx......:....x:xx.x::..::x:...x....:. 52M1I42M 67/94 71.3% 95/94230402 0.0% 1/94 1.1% 39814500 NA +5730 chr4 + 190214555 88277133 88277132 88277306 174 TTTTACATACCATCAGCAGACAGGCGGGCATGACTCGAAAAGGCTTTATCTATTTCTAGAAAAGCCAAGGTCAACAGAGTTTCCAAGTTCTTCTCCTTAGGAAGCAAATCCCTTTG-------TGGGGAGGAAAAAAAGAG--------------------CCTTAAACAATCATTTTACAATAGGTTTTTCTCCTCACTG chr4 + 94230402 48461086 48461085 48461283 48461086 48461085 48461283 198 TTTTACCTACCATCAGCAGACAGCTGAGCATGCCTTTCGTATGCTTTGTTTATTTCTAGAAAAGCATCGTTCAAAACTTTTTCTAAGTTCTCCTCC-TGGGCAGCAAATTCCCTGGGAACAAACAGTGAAAAAAATCAGAGTCCTTACCAAGAAGTGTTCACCTTAATCAATCTCTTT--CGTAGACTTACTTCCTCCCTG ......x................x:.:.....x..:xx:x.x.....:.:...............xxx.x....x.xxx....:.......:....-.:..x.......:..:.x.-------::.x..::....xx....--------------------......x.....x:...--x:...::..x::.....x... 96M1D19M7I18M20I17M2D21M 125/171 73.1% 198/94230402 0.0% 30/171 17.5% 39816047 NA +24812 chr4 + 190214555 88278138 88278137 88278657 520 ACATACATAATACATTTCTCCATGTGGGTATGACAGAAATCAGCTGCTGCAGGTCCACCGTGTCCATCATACACTGCAAAGTACAGGACCTCATCTGTCAGCTGAGCGAAGTCAAACCGATCTTCATTCTCTTTCCGTTTGCCAATCTGTGAGGCGCACCCCACATTTTCCAAGCTGATTTTGGGAATTGGCTTGCCATACTTAATGCTGGGTGGCAGCAGAATTGGCTCATCAATGCGGTTATCCCAGATCCCAAAATTGTCCCAGGTAGCTGGACTCCCACTACCATCTGGGTCAAACCGAGAACACCTAGGCTCTGAAGTGGAGCTGTGGCACGTGGGTGTCACCCGCCTGTCGTCCTGCAGCAGGCGGGAGCTTAGCAGCACTCTCCTTCTCACCTGGTTCCCACCACTTCTGACCAAAGTAATTAAGGCAGCTGTTGACATAACTCAGCTCCAAAGGACTCAGTGATGAGGGAAAGGTCAATGGAACAATAATGGAATGTCTTCAAGAAAAATGA chr4 + 94230402 48461767 48461766 48462281 48461767 48461766 48462281 515 ACTTACTTGATATATCTTTCCATGTTCTTAGCGCAGAAGTCTGCTGCTGCCGCCCCGCCGTGTCCATCGTATACCGCAAAGTACAGGACATCCTCAGTCAGCTGAGCGTAATCAAAGCGGTCTTCATTTTCCTTCCGCTTCCCAATATGGCTGGCACAGCCCACTTTGCTCAAGCTGACTTTTGGAATCGGCTTTCCATACTTTATGCTAGGTGGGAGGAGAATAGGTTCATCAATGCGATTGTCCCAGATGCCAAAGGTGTCCCATGTGGCGGGCCGCCCGCTCCCGTCCGGATCGAAGCGGGATGCCCGGCGTTCGGAGGTGGAAATGCAGCACTCGGCTGTCGTACGCTTCTCGTCTTGCAAGAGGCGGGATGTCAGCAGGGCTCTCCTTCGTACTTGATAACCTCCGTTTCTTACCAAATGGATTAAAGCAGCTGTTGACATAACTTGTCTTCGCAGAGATTCGTAGGGATAAAAGAG---ATGTAGCAGC--TGGAATGTCTTCAAGAACAAAGA ..x...x.:...:..:.:.......xxx..xx:.....:..x........x.x:..:...........:..:..:..............x..x..x............x.:.....x..:........:..:.....:..x.....x..xxx...:..x.....x..x::........:...x.....:.....x........x.....:.....x..x.....x..:...........:..:........x.....:x.......x..:..x..x.x...:..x..:..:..:..:..x..:..xxx..x:x.:..x..:.....:x..::....x:..x....::x...:.x.....:....:x........xx.:.....x:.........x:..:..:.xx..x..::....x......xx:.....:..................::x..:.:x..::x.:x..::x..x::..::.---...x.:..::--.................x..x.. 482M3D10M2D23M 377/515 73.2% 515/94230402 0.0% 5/515 1.0% 39816371 NA +3309 chr4 + 190214555 88285968 88285967 88286029 62 TTCCTGGATTTTTTTTTCTTTTGTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 62204773 62204772 62204834 62204773 62204772 62204834 62 TTCCTCAAAATCTTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGTTTTG .....x:.xx.:..:...:........:.......:.....:.:.::....x..:.x..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 26081195 NA +3008 chr4 + 190214555 88285980 88285979 88286028 49 TTTTTCTTTTGTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 11806867 11806866 11806915 11806867 11806866 11806915 49 TTTATCTTTTGTCATTCCTTCTTTTTTTTTTTTCCCTCCTTCTTTATTT ...x.........x...:...............:::.::..:...x... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 76479113 NA +3050 chr4 + 190214555 88285980 88285979 88286041 62 TTTTTCTTTTGTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTT chr4 + 94230402 58103396 58103395 58103457 58103396 58103395 58103457 62 TCTTTCTTCTGTCATTATCTGTACATCTTTTATTTCTTTTTTTTTTTTTGAGAGAGTCTTTT .:......:....x..x.:.x.x:x.:....x...:.................x..xx.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 30182584 NA +3067 chr4 + 190214555 88287706 88287705 88287764 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 12254500 NA +3537 chr4 + 190214555 88289270 88289269 88289361 92 GTGCACCTGTAATCCCAGCTACTCGGGAGGATGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGCGAGCCAAGATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x....:.:.........:.::...x....x.xx.x...x..........::.:..x:xx:..:..:..------..x..x...... 74M6D12M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 12256066 NA +3847 chr4 + 190214555 88307422 88307421 88307504 83 CATGGTGGTACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:...:--......:.........:.::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 12274225 NA +3134 chr4 + 190214555 88324688 88324687 88324769 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATCGCTCGAACCTCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x.:..:.....:x.:..x:xx:..:..:.. 6M1D6M4D65M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 12291487 NA +4451 chr4 + 190214555 88332705 88332704 88332943 239 TTCCCTCCCTCCCTCCTT---------TCTTTCTTTCTTTCTCTTTTTCTTTCC-----TTCCTTCCTTCCCTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCCTCCCTCCCTACCTCCTTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTC-CTTCTCTCTTTCTTTCTTTCTCTCTTTCTTTC chr4 + 94230402 19215305 19215304 19215556 19215305 19215304 19215556 252 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCC--ACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATC ...:..x...:....::.---------.:...x...:x..:....x..xx..x:-----....--x...:.x..:..:xx:x:x....:...xx.x:..x:xx.:...:..::x..:..::.:....:...:...xx...xxx:xx......x..:....x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x.....:.xxx....-...xx..:...::.x.:..x.x.:.....x.. 18M9I27M5I4M2D156M1I32M 145/237 61.2% 252/94230402 0.0% 17/237 7.2% 69117400 NA +3385 chr4 + 190214555 88332719 88332718 88332945 227 CCTTTCTTTCTTTCTTTCTCTTTTTCTTTCCTTCCTTCCTT-----------CCCTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCCTCC----CTCCCTACCTCCTTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCT---CTTTCTTTCTTTCTCTCTTTCTTTCTC chr4 + 94230402 19215312 19215311 19215556 19215312 19215311 19215556 245 CCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATC ....:..:...x.:xx.xxx.....x...:x..:::.:x..-----------::.:x...:.x..:...xx:x:x.:..:...xx.x:..----.:...:x.::..::..:::.:...:...:...x...::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x..x..x..:xxxx.......---....:..::x:::.x.x...:.:.x.. 41M11I38M4I121M3I27M 129/227 56.8% 245/94230402 0.0% 18/227 7.9% 69117407 NA +3197 chr4 + 190214555 88332764 88332763 88332872 109 CCTTCCTTCCTTTCTTCCTTCCTTCCTTCCCTCCCTCCCTACCTCCTTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCA------CCATCTTTATCTTTCTAGCCCCCTTTCTTTCT--CTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:x.x.......x...x------..x..::.x:..::...x.:..:.:::.....--.....x....x:...x.::..x:x.......x.....::..::.:...... 18M6D32M2D51M 68/101 67.3% 101/94230402 0.0% 8/101 7.9% 5005836 NA +3462 chr4 + 190214555 88332782 88332781 88332938 157 TTCCTTCCT-TCCCTCCCTCCCTACCTCCTTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCTCTTTCTTTCTTTCTCTCTTT chr4 + 94230402 28328431 28328430 28328587 28328431 28328430 28328587 157 TTTCTCCCTGTCTATTGTTCTCTGCTTCCAATGTTTTTCCATTTTATATTGTCTGTTTCTCCTTTTATGTTTTGATTTTCATTTATTCTACTTTTTCTCTCCACTTTAATTTTTTTCTTCCTTACAT---TTCCTACTCACTTATTTCCTTCACCTATTT ..:..:...-..:x.:x:..:..:.:...xx:x....:::x:...x.x.::.:.x.....:::...x.x.:..--.:..:x...x..::x:.:.....:..:x::..xx...:......:.:.x...---.....x...x...x:..:...:x:..x... 9M1I63M2I52M3D30M 94/154 61.0% 157/94230402 0.0% 6/154 3.9% 60004351 NA +4158 chr4 + 190214555 88332792 88332791 88332942 151 CCCTCCCTCCCTACCTCCTTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTCATTCCTTCCTTCTCTCTTTCTTTCTTTCTCTCTTTCTTT chr4 + 94230402 19215408 19215407 19215566 19215408 19215407 19215566 159 CCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATC-CTCTGTCTCT ...:..::...:x..:.:..::....:...xx....xx..x......x..::...x......xxx....x.x..::----:......:.x.:.:.:..x.:x..:..-----...::...x.:.::..:..x.::.x.x.:.....x..-....x...:. 76M4I27M5I37M1D10M 98/150 65.3% 159/94230402 0.0% 10/150 6.7% 69117384 NA +3470 chr4 + 190214555 88332818 88332817 88332936 119 CTTTCTTTCTTTCATTTCT----TTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCTCTTTCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..x....:----..:.:..........:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx..:...x:...--...::.:........:....:.x.:. 19M4I37M2I35M2D26M 79/117 67.5% 123/94230402 0.0% 8/117 6.8% 24635701 NA +4042 chr4 + 190214555 88332822 88332821 88332985 164 CTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCTCTTTCTTTCTTTCTCTCTTTCTTTCTCAAGACAGGAGTGTGCCCTGTTGCCAAGGCTGGCCTGTGCT chr4 + 94230402 63697117 63697116 63697274 63697117 63697116 63697274 158 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAAAAG------CTGTAGACAATTGTTGCCTATACT ....x..:.x:.:.....:xx:x....:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.::....:xx::.:::....:.:.::.........::....:.x.:.x.::.x.::..------....x.x...xxx.x....:.:.. 134M6D24M 94/158 59.5% 158/94230402 0.0% 6/158 3.8% 24635705 NA +3219 chr4 + 190214555 88332827 88332826 88332913 87 TTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCT chr4 + 94230402 86491058 86491057 86491142 86491058 86491057 86491142 85 TTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTT--TTTTTTTCCCCCCCCCCTCTGTTTTTCCCT .....x..:...:...:........xxxx..:.::..:.x.x..:.:........--...:....:::.:::...:::..::.:... 55M2D30M 56/85 65.9% 85/94230402 0.0% 2/85 2.4% 1841769 NA +3522 chr4 + 190214555 88332832 88332831 88332944 113 TTTCTTTCTTTCTTTTTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTC----CTTCTCTCTTTCTTTCTTTCTCTCTTTCTTTCT chr4 + 94230402 63697118 63697117 63697235 63697118 63697117 63697235 118 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...x..:..:..:...::xx.-..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx....:.:.::...----::.:.....::.:.::.....:....:....:. 21M1I59M4I33M 72/113 63.7% 118/94230402 0.0% 5/113 4.4% 24635714 NA +3198 chr4 + 190214555 88358865 88358864 88358919 55 CTGATTTATATATATATATACACACACACACACAAATATATACATATATGTGTGT chr4 + 94230402 89823926 89823925 89823980 89823926 89823925 89823980 55 CTGACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ....:........:x...:...............xx....xx:......::..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -1465061 -92765341 +3015 chr4 + 190214555 88358871 88358870 88358933 63 TATATATATATATACACACACACACACAAATATATACATATATGTGTGTACATATATGTGTGT chr4 + 94230402 22600205 22600204 22600267 22600205 22600204 22600267 63 TATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGT ...x:.:..::.x.....::..:...x......:..:..x.:........:..::...:::.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 65758666 NA +3283 chr4 + 190214555 88358885 88358884 88359032 148 CACACACACACACAAATATATACA---TATATGTGTGTACATATATGTGTGTGTATATATATATACATATATGTATATCTTTTCTGCTTTTTCTCTTTGGATCCCATTATGAACATTTTTTTCAGTTGACTGAAACCCTTTTTAAAATTAT chr4 + 94230402 48958650 48958649 48958780 48958650 48958649 48958780 131 CACACATGCTTGAAACTAGCTGCACTGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGATTTTTCCAATCTTTCTC-------CTCATGATGA-------------TTGGTTAGTATTTTTCATAAAATTAT ......::.x::x..x..xx.:..---.:.:.x...:.........:..............x...::x.x:.xx:.:x:.....::x.:......-------.:...x....-------------...::.::x.:::..:x......... 24M3I68M7D10M13D26M 85/128 66.4% 131/94230402 0.0% 23/128 18.0% 39400235 NA +3082 chr4 + 190214555 88369693 88369692 88369746 54 TGTAATTCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.............::........x.xx:x...x.:........::.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 12336482 NA +4006 chr4 + 190214555 88379714 88379713 88379815 102 ATAAATATATATAATATATAAATATATAAATATATAACATATAAATATATATAATATATAAATATATATATAACATATA----AATATATATAATATATAAATATA chr4 + 94230402 53982924 53982923 53983021 53982924 53982923 53983021 98 ATAAAAATA---AATATAGGAATGTATAAAAGTATAATATGTAAATACATATTACATATAAAC-----TATATCATATAGTACAATATATAAAACAAATACAGATA .....x...---......x:...:......x:.....:..:......:....x.:.......:-----....x......----........x..:.x...x.x... 9M3D51M5D11M4I23M 76/94 80.9% 98/94230402 0.0% 12/94 12.8% 34396790 NA +3602 chr4 + 190214555 88380588 88380587 88380659 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 12347382 NA +3391 chr4 + 190214555 88384882 88384881 88384965 84 ACGTTGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATTACTTGAACCCGGGAGGAGGAGGTTATAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::x........:.--....:.:...........::........x.xxxx...x:..........:.:..xxxx:..:.:... 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 12351686 NA +3004 chr4 + 190214555 88386161 88386160 88386223 63 TAAAAGAGAAAAGGCACCCAATTTATCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTCTTTTTT chr4 + 94230402 63716685 63716684 63716747 63716685 63716684 63716747 63 TAAAAGAGCAAACTCATGCAATATATCTGTATTCTATTCTTTTTTTTTTTCTGTGACTCTTCT ........x...xx..:x....x.....x.x....x..............:.x.xx..:..:. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 24669476 NA +12332 chr4 + 190214555 88390633 88390632 88390864 232 TTTCTCGTCTTTGTTGTAGATAGCCAAGTGTTTTCGTGGGGAAAGAACAGCCATGGGCAGCTGGGCTTGGGGAAGGAGTTCCCCTCCCAAGCCAGCCCGCAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCACAGCTTTGCCCTGTCTCTCTGTGGGACTTCGTTTGGCTGGGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTG chr4 + 94230402 36218957 36218956 36219188 36218957 36218956 36219188 232 TTTTCTTTCTTTGTTTCAGATGGCCAGTTCTTCACGTGGGGGCAGAACAGCTATGGTCAGTTGGGCCTGGGGAAAGAATGTCCGTCCCAAGCAAGTCCACAGCGTGTCAAGTCTCTTGATGGGATCCCTTTGGCCCAGGTTGCTGCAGGTGGAGCCCACAGTTTTGCCCTCTCTCTCTCAGGAGCTGTGTTTGGCTGGGGGAAGAACAGCTCAGGACAGCTGGGACTAAGTG ...:::x........x:....:....:x.x..:x.......:x........:....x...:.....:.......:..:.x:..x........x..:..:...x.x..x.:...:..x..x........x:....:.....x.....x..x..:..:.....:........x.......xx..::..x:............:.:x.....:x.x..:.......xx..x.... 232M 173/232 74.6% 232/94230402 0.0% 0/232 0.0% 52171676 NA +7563 chr4 + 190214555 88390663 88390662 88390975 313 TTTTCGTGGGGAAAGAACAGCCATGGGCAGCTGGGCTTGGGGA---AGGAGTTCCCCTCCCAAGCCAGCCCGCAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCACAGCTTTGCCCTGTCTCTCTGTGGGACTTCGTTTGGCTGGGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTGGGCGTAATGTCCCAGGTAAGGAGATAGTCTTGTTTG----------TGCAGTAA-----ATCATTCTTTCTTTCCAGGTGGAAGACCAACTTGGCAAAGGGCAGTCTTAACGCTTAAAACAGTGGT chr4 + 94230402 36179425 36179424 36179742 36179425 36179424 36179742 318 TTTACCTGGGGCCAGAATACCCATGGACAGCTTGGAGTGGGGAGCCAAGACCTGCTCATCT---CCAAACCGCAGCTGGTGAAAGGCCTAAAGGGCATCCCACTTGCTCAAATTGCTGCTGGAGGAGCTCACAGCGTTGTTGTGTCACTCTCTGGAGCTGTATACTCCTGGGGAAAGAACGATTTTGGACAGCTGGGACT---TGGACATACAG---AAGGTATGAAAATAAAGCAGTTTGAGAGCAAAGCAGCAGGAAGATGGATGAGTTTTTTTTTGCAGGAACAGGAATGGTTCAGGAATGCTAAGCCT----GTTTGGAACAGCAGT ...x.x.....xx....:.x......:.....x..xx......---.:..x:.x.:.x:.:---...:x......xx.....::xx...::....x........x.....::.x.....:.....:.........x...::x....x....x...::..x::.x:xx........:x...::.x::..:.......xx..---...:.:..xx.---x.....x.:.:...:xx:x.....----------x....x..-----..x.x.:...:...x....x:x.:..x::::.::.x..x.xxx..:..----.:..::.....::.. 43M3I15M3D136M3D11M3D24M10I8M5I48M4D15M 198/300 66.0% 318/94230402 0.0% 31/300 10.3% 52211238 NA +3885 chr4 + 190214555 88391901 88391900 88392012 112 TTAGCTAAGTTTTT--CTTTCCTTTCCTTTCCTTTTCCTTTCCCTTTTCCTCCCCTCCCCACTCCTTTCCCCTCCCTTTCCCTTCCCTCCCCTCCCCTTCTCCCTCCCCTCCCC chr4 + 94230402 53764519 53764518 53764628 53764519 53764518 53764628 110 TTAGTTTAGTTTCAAACTTTGCTTT--TTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTT--CTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ....:.x.....:x--....x....--..:..:.:........::.....::......x...:.x........:x...--.::.x...:::...x:::.:x:.x....:..:.. 14M2I9M2D51M2D34M 75/108 69.4% 110/94230402 0.0% 6/108 5.6% 34627382 NA +3167 chr4 + 190214555 88391941 88391940 88392059 119 CCTTTTCCTCCCCTCCCCACTCCTTTCCCCTCCCTTTCCCTTCCCTCCCCTCCCCTTCTCCCTCCCCTCCCCTTCTCTCCCTCCC------------CTCCCCTTCTCTCCCTCCCTCCCCTCCCCCTTCC chr4 + 94230402 30502818 30502817 30502948 30502818 30502817 30502948 131 CTTTTCCTTTGCTTCCCCAACTCATCTTTCTACCTCCCACATCCAACCCCACACCTCCCTCCTCCCCCCCCCATCTCACCTCTCCAGAGCACAGCTGCAGCACTCCTGCACCTTTCACCCCACGTCCTCCC .:...:.:.:x.:......x::.x.::::..x...::.x.x...xx....x.x...:.::.......:....x....x..:::..------------.xx.x..:..x:x...::.x....x.x:...:.. 85M12I34M 73/119 61.3% 131/94230402 0.0% 12/119 10.1% 57889123 NA +3736 chr4 + 190214555 88391962 88391961 88392173 212 CCTTTCCCCTCCCTTTCCCT-----TCCCTCCCCTCCCC----TTCTCCCTCCCCTCCCCTTCTCTCCCTCCCCTCCCC------------TTCTCTCCCTCCCTCCCCTCCCCCTTCCTCCCCTCCCC----TTCTCCCCTCCACTC------CCCCCTCCCCTTCTCCCCTTCCGTTCCCCCTCTCCCC-----TCCC-----TTCCCCTCTCCTCCCCTGTCTTCCCTTCTGTCC--TCTTCCCTTCTCTTC chr4 + 94230402 36929154 36929153 36929408 36929154 36929153 36929408 255 CCTTTTCCCTCCATTTCCCCTAGAATCCCAACTTTTTCCACGTTTTTCTCTTCATTCTCACATTTTCCACCCTTTTCCCCAACATTCCCAATTTTTTTCCACCATTTCCCCTGCTTTCCCACCTTTTCCCACATTATCCCCTACATTCTTACATTTTCCCTACCTTTTCTCCTACGTTCCCACGTTTTCTCGTAAATTCCAAACATTTCTTCCTTTTTCCCTACATTCCCACTTGTCCCACCTTTCCCCCGCCTC .....:......x......:-----....xx.::.::..----..:..:..:.x:..:.x:x:.:...x:..::.:...------------..:.:.:..x..x.::..:.:x.:....:x..:.::..----..x......x..:..------:::..::x....:..:...x.xx.:..x.x.:.:.:.-----.:..-----..:.:::..::.:....::x.....x::.....--:...:..::.x.:.. 20M5I14M4I36M12I38M4I15M6I37M5I4M5I33M2I15M 131/212 61.8% 255/94230402 0.0% 43/212 20.3% 51462808 NA +3590 chr4 + 190214555 88391998 88391997 88392141 144 CTCCCTCCCCTCCCCTTCTCTC--------CCTCCCCTCCCCTTCTC------TCCCTCCCTCCCCTCCCCCTTCCTCCCCTCCCCTTCTCCCCTCCACTCCCCCCTCCCCTTCTCCCCTTCCGTTCCCCCTCTCCCCTCCCTTCCCCTCTCCTCCCC chr4 + 94230402 68040648 68040647 68040805 68040648 68040647 68040805 158 CTCCATCCCCACACCTTCCTCCAGATGTAACCCCTCCTGTCCTGCTCAGATGGTGTTGCCCCCTCCACCTCCTGCCCTCTCCTCACACAGCCCCGCTGCTGCCACGTCCCCGAATCCTCGCTCATCCCCTCCCACCCGCCTCTTTCTTATTCCTCCCC ....x.....x.x.....:::.--------..:.:...x:...x...------.x::x...:.:..x..:...x..::.:.::.x.x:xx....x.::..x..x.x.....xxx...:.x::.:.:...:.:.x...x:.:...:.::x:........ 22M8I17M6I105M 88/144 61.1% 158/94230402 0.0% 14/144 9.7% 20351350 NA +3031 chr4 + 190214555 88392056 88392055 88392133 78 TTCCTCCCCTCCCCTTCTCCCCTCCACTCCCCCCTCCCCTTCTCCCCTTCCGTTCCCCCTCTCCCCTCCCTTCCCCTC chr4 + 94230402 53757785 53757784 53757862 53757785 53757784 53757862 78 TCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCC .::..:..x..:::...x..:..:x.x.......:....::.:.:....::x..:..::.:.::.:.:::..:...:. 78M 46/78 59.0% 78/94230402 0.0% 0/78 0.0% 34634271 NA +3220 chr4 + 190214555 88392058 88392057 88392170 113 CCTCCCCTCCCCTTCTCCCCTCCACTCCCCCCTCCCCTTCTCCCCTTCCGTTCCCCCTCTCCCCTCCCTTCCCCTCTCCTCCCCTGTCTTC---CCTTCTGTCCTCTTCCCTTCTC chr4 + 94230402 1174658 1174657 1174773 1174658 1174657 1174773 116 CCTCTCCCCCACGGCACCTACCTCATCCAGCCTCCACTTCTGCCTGTCCCTGTCTCCCCACCTTCCTGCTCCCCTCTGCTCTCCTGGCTTCAAGCTGTTTGCCCACAGCCTTTCCC ....:..:..x.xx.x..:x:.:xx...xx.....x.....x..:x...x.x:.:..:.x..:::.:x:........x...:....x....---.:x.:..:..x.xx..:...:. 91M3I22M 71/113 62.8% 116/94230402 0.0% 3/113 2.7% 87217400 NA +3839 chr4 + 190214555 88394344 88394343 88394415 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAATTGAACCCAGGAGTCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x..x..........:..::xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 12361138 NA +3128 chr4 + 190214555 88399635 88399634 88399700 66 GTGGTACGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:.:x.--....:.:...........::........x.xx.x...x:::..........:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 12366434 NA +3106 chr4 + 190214555 88400188 88400187 88400238 51 TTTGTTTTTGTTTGTTTGTTTGTTTGCTTGTTTTTTTGTTGTTTTGAGACA chr4 + 94230402 89931299 89931298 89931349 89931299 89931298 89931349 51 TTTTTTTTTGTTTGTTTGTTTGTTTTGTTGTATTCCTGTGTTTTTGAGGCA ...x.....................xx....x..::...xx.......:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -1531111 -92699291 +3560 chr4 + 190214555 88432593 88432592 88432671 79 GTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAAGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--....:.:...........::........x.xx.x...x..........:.::..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 12399392 NA +3160 chr4 + 190214555 88438103 88438102 88438152 50 GCAACAGAGTGAGACTGTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGCAT chr4 + 94230402 88382708 88382707 88382757 88382708 88382707 88382757 50 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCAT ....x:...::....x.:x.........::.:.................. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 55395 NA +3357 chr4 + 190214555 88438104 88438103 88438283 180 CAACAGAGTGAGACTGTGTCTCAAAAA--AAAAAAAAAAAAAAAAAAGCATTTTAGCTTCTCAGGTGATTGTTTTAGCTCCTAATCTTTTAGAAAAAAGAAGCTTTTAAGATAAAAGAAAAGGA---GAAAGAATTCAGGGTTCAATATTTCCTTTGTAGCTCTTTTTACTATTTATTCATTTAG chr4 + 94230402 14832124 14832123 14832288 14832124 14832123 14832288 165 CAACAGGAAGGCAGTGGATTTGTAAAATTCAAAAAAAAAAAAAAAAATCAGTTTAGTTTCTCATGCAGATTTTGAAGGTCTGAATCTTATGG---------------AAGATACAAAGAAATGACTGTAAAAAAGTCATAGTAAATCATACCCTTT-----TCTTCATCATATGTATCTGTATAG ......::x.:x.x..x:.:.xx....--x.................x..x.....:......x.:::x.x..xx..x..:x......x.:.---------------......x..::...x..---x...:..x...x:..xx.x:..x:.....-----....:x.xx...x...:::.x... 27M2I63M15D17M3I29M5D24M 108/160 67.5% 165/94230402 0.0% 25/160 15.6% 73605980 NA +3572 chr4 + 190214555 88440179 88440178 88440272 94 CACATCCTACTATACAGTTGTTTTGGAAGGCTTTCCACAAACTAACCTTGGATGAAAAGAAAAAATTCCTCTGTAAGTACT-----GTGGTACTAGATG chr4 + 94230402 36242102 36242101 36242200 36242102 36242101 36242200 99 CGCACCCAACGGTGAGAATGTTTTGGGAAACCTTTCATGCATTTCCCTTGGAAAAGAAGAAGAAATTTCTCTGTAAGTATTTGGCAGTGGTGCAGGCTG .:..:..x..x:.:x::x........:.::.:..:..::x.:.xx.......x:.:.....:.....:...........:.-----.....:.x:.x.. 81M5I13M 63/94 67.0% 99/94230402 0.0% 5/94 5.3% 52198077 NA +3362 chr4 + 190214555 88448764 88448763 88448846 83 CATGGTGGTGTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:::.--......:...........::........x.xx.x...x::........::.:..x.xx:..:.x:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 12415567 NA +3772 chr4 + 190214555 88460850 88460849 88460932 83 CATGGTGGCTTCCACCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGGATCCCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.x...x......:...........::...x....x.xx.x.:.x.x.....:.....:..:..x:.....:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 12427653 NA +8796 chr4 + 190214555 88462121 88462120 88462364 244 TTGTTTATGTCAAGGTGGTGAGCTTTTTGCCTGGGGACAGAACCTGCATGGGCAGCTTGGAGTTGGAAGGAAATTTCCCTCAACCACCACACCACAGATTGTGGAGCACCTCGCAGGAGTACCCTTGGCTCAGATTTCTGCCGGAGAAGCCCACAGCATGGCCTTATCCATGTCTGGCAACATTTATTCATGGGGAAAAAATGAATGTGGACAACTAGGCCTGGGCCACACTGAGAGTATGGAA chr4 + 94230402 36179400 36179399 36179643 36179400 36179399 36179643 244 TTGCATGCATGAAGGAGGCAGTCTCTTTACCTGGGGCCAGAATACCCATGGACAGCTTGGAGTGGGGAGCCAAGACCTGCTCATCTCCAAACCGCAGCTGGTGAAAGGCCTAAAGGGCATCCCACTTGCTCAAATTGCTGCTGGAGGAGCTCACAGCGTTGTTGTGTCACTCTCTGGAGCTGTATACTCCTGGGGAAAGAACGATTTTGGACAGCTGGGACTTGGACATACAGAAGGTATGAAA ...:x.:::.x....x..:::x..:...:.......x.....:x:x.....:...........x..:..xx..xx:.:x::x.:.x...x...:...x.x...:.:x:...x:x:..x:.x..x:.x.....:...x....:....:...:......:.x.::x.:..xx.x.....x:x::.x..:..x........:..:..x.x......:..:..x..x..x..:..x..::.....:.. 244M 157/244 64.3% 244/94230402 0.0% 0/244 0.0% 52282721 NA +5631 chr4 + 190214555 88463853 88463852 88464021 169 AGGATGGGCTGCTGTTTACTTTCGGTGCTGGAAAACATGGGCAACTTGGTCATAATTCAACACAGAATGAGCTAAGACCCTGTTTGGTGGCTGAGCTTGTTGGGTATAGAGTGACTCAGATAGCATGTGGAAGGTAAGTTGTAAAGTATCAATAAGAATTGATAAAATG chr4 + 94230402 36181392 36181391 36181548 36181392 36181391 36181548 157 AGAATGGCTTGGTGTTCACCTTTGGAGCAGGAGGGGCTGGCCAGCTTGGTCACAACTCCACCCGGAATGAATTTAGACCTCGCATGGTGGCTGAACTGTGGGGAGCAAGAGTTTCACTGGTTGCCTGTGGAAGGTGGG----AAAGTACC--------TTAATAAAATG ..:....x:..x....:..:..:..x..x...:::xx...x..:........:..:..x..x.:......::.x.....::.:x..........:..xxxx..:xxx.....xx.x.x.:.x..x..........::.----......:.--------..:........ 138M4D8M8D11M 109/157 69.4% 157/94230402 0.0% 12/157 7.6% 52282461 NA +3287 chr4 + 190214555 88464546 88464545 88464599 54 AGGTTTTTTGG-----TTTTCTTGTTTGTTTGTTTGTTTGTTTTTTGGTTTTTGGTTTT chr4 + 94230402 25418137 25418136 25418195 25418137 25418136 25418195 59 AGGGTTTTTGGGGTGTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTAGCATTTTGGTTTT ...x.......-----....:..................x.....x.xx.......... 11M5I43M 48/54 88.9% 59/94230402 0.0% 5/54 9.3% 63046409 NA +3018 chr4 + 190214555 88471959 88471958 88472009 51 TCCCTCCCTCCTTCCCTTCCTTCTTTCTTTTCTTTTTTTCTTTCTTTCTTT chr4 + 94230402 86518998 86518997 86519048 86518998 86518997 86519048 51 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCT .:.:.......:..:...x:...xx.:............:.......:.:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 1952961 NA +3109 chr4 + 190214555 88471963 88471962 88472014 52 TCCCTCCTTCCCTTCCTTCTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTCTG chr4 + 94230402 86518998 86518997 86519049 86518998 86518997 86519049 52 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTG .:.:...:.....::...x....xx..:...:...:...:............ 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 1952965 NA +3160 chr4 + 190214555 88473280 88473279 88473342 63 TTCTTTCTTTCTCTCTCCTTCCCTCCTCCCCTCCTTCCTCCCTCTAGC-CTCACCCCATTTTTT chr4 + 94230402 49829865 49829864 49829928 49829865 49829864 49829928 64 TTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT ..........:.:...:...:...:...:..:..::........xx:.-.x...::::...... 48M1I15M 46/63 73.0% 64/94230402 0.0% 1/63 1.6% 38643415 NA +3656 chr4 + 190214555 88477211 88477210 88477341 131 AATCAATCAAAAGAAAGGAAGGAAGGGAG--------------GGGAGGGGAGAGGAGGAAGGGGGAGGGGAGGGAAGGGGAAGGGAAGGGGAAGGGGGAGGGGAGGGGGAGGGGAGGGAAGG-GGAAGGGAGGGGGAGGGGGGAG chr4 + 94230402 890625 890624 890770 890625 890624 890770 146 AGTCCAGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAG .:..x.x....:.:.x.xx:..:....:.--------------:.:::...:.x:.......:.......x..::::::.:.:x...x..:...::.:...x.x....:..::xx..:.:x.:-...:.:...x..:x........ 29M14I80M1I22M 81/131 61.8% 146/94230402 0.0% 15/131 11.5% 87586586 NA +3386 chr4 + 190214555 88477228 88477227 88477360 133 GAAGGAAGGGAGGGGAGGGGAGAGGAGGAAGGGGGAGGGGAGGGAAGGGGAAGGGAAGGGGAAGGGGGAGGGGAGGGGGAGGGGAGGGAAGGGGAAGGGAGGGGGAGGGGGGAGAGAAAGAGAAGGGGAGGGG chr4 + 94230402 14577298 14577297 14577426 14577298 14577297 14577426 129 GATAAAAGGAAGATGAGAGG----GATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGAGTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGACAGCTAAGGAAGGGTAAGGG ..x::....:..:x...:..----..x:..:.:...:.:...::.x......xx...:.:.x...x:.::.:..:....x.:.:.:..x::.:x:..xx..:.xx:::.::..x..xx.::......x.:... 20M4D109M 75/129 58.1% 129/94230402 0.0% 4/129 3.1% 73899930 NA +4020 chr4 + 190214555 88477238 88477237 88477398 161 AGGGGAGGGGAGAGGAGGAAGGGGGAGGGGAGG---GAAGGGGAAGGGAAGGGGAAGGGGGAGGGGAGGGGGAGGGGAGGGAAGGGGAAGGGAGGGGGAGGGGGGAGAGAAAGAGAAGGGGAGGGGAAGGGAAAGGGAAGGTGAAGGGAAGGGAACTGAAAGGA chr4 + 94230402 890630 890629 890784 890630 890629 890784 155 AGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCA---------GAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGGCTGCAGGGA ..x::....:x.xx.:...:....xx....x::---.x..:.:::...x..:.....:.......x..::...:.:::x...x..:...::...:.x.x:...:..:.xx.---------....x..x..:::..:.x:.:..::....:xx.::...x.:... 33M3I75M9D44M 92/152 60.5% 155/94230402 0.0% 12/152 7.9% 87586608 NA +4316 chr4 + 190214555 88504229 88504228 88504425 197 AAGGAGAGACTATGTTTCTAAG--TATATCAATTACATTTTCAACGACTCTGTAAAGGCGGTTTATGAAGAATTTCGGAGAGGATTTTATAAAATGTGCGACGAAGACATTATCAAATTATTCCACCCCGAAGAACTGAAGGATGTGATTGTTGGAAATACAGATTATGATTGGAAAACATTTGAAAAGGTACATCATC chr4 + 94230402 36241351 36241350 36241546 36241351 36241350 36241546 196 AGGGAGAAATT---TGTCGAAGCCTATGTAAATTACATCTTCAACTGCTCCATCCATGAGTGGTACACAGCCTTCTCCACTGGCTTCCTGAAAGTGTGTGGTGGGAAAGTCCTGGAGCTATTCCAGCCCACAGAGCTCAGGGCCATGATAGTTGGAAACAGCAACTACAACTGGGAGGAACTGGAGGAGGTAAAGCTTC .:.....:.:.---.x..x...--...:.x........:......x:...::.xx.x.x.xxx..::x..xx..::xx.xx..x..::xx...:....:.::.:::.x:.:x.x:.::.......x...:x...:..x.:..x::....x........:.xx:.:..::.:...:.::x.:.x..::.....x.x.x.. 11M3D8M2I175M 115/194 59.3% 196/94230402 0.0% 5/194 2.6% 52262878 NA +3019 chr4 + 190214555 88504478 88504477 88504601 124 TTTTGTATTTTCTCTAGAATGCACGTTATGAACCAGGATATAACAGTTCACATCCCACCATAGTGATGTTTTGGAAGGCTTTCCACAAATTGACTCTGGAAGAAAAGAAAAAATTCCTTGGTAA chr4 + 94230402 36194598 36194597 36194718 36194598 36194597 36194718 121 TTCTATCTCTTCAACAGAATGTGAAGTATG---TGTACTATGAAGCGTCACATCAAACCATCAAGAATTTTTGGACTGTGTTTTACAAGCTCCCAGAAGAAAAAAAGAAAAAGTTTCTTGGTAA ..:.:.x.:...xx:......::x:x....---::x:x...:.x:xx.......xx.....x:x..xx.......xx.:x..::....::.xx.xxx:...:..........:..:........ 30M3D91M 75/121 62.0% 121/94230402 0.0% 3/121 2.5% 52309880 NA +3144 chr4 + 190214555 88516476 88516475 88516558 83 TACGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCCCTTCTTTGCAGGATTGGCTGCAAATAAAGAAGGACA chr4 + 94230402 61620589 61620588 61620671 61620589 61620588 61620671 83 TGTGTCAAAAGAGAAACAAAGAAACAAAAACAAACAAAAACAACCCAGTGCTTTGCAAGATCTGCCAGCAACAGGGAAAGGCA .::...xx..:.:...x...:...x.....x...x.....x..:..xx.x.......:...:x..::xx..:.::...:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 26895887 NA +3780 chr4 + 190214555 88519713 88519712 88519792 80 CATGGTGGCACATGACTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAACTCAGGAGGTGGAGGCTG chr4 + 94230402 76033197 76033196 76033274 76033197 76033196 76033274 78 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::....::..:.--......:...........::........x:xx.x...x.........:...:..x.xx:..... 14M2D64M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% 12486516 NA +11849 chr4 + 190214555 88521570 88521569 88521785 216 TGCATCAATTATGCCTGAAGAGTTTAATACCCATCCAAGTCCAAAGGTGGAAGAATACATACACTGGTATGGTAATAGGCAAGAGCAGGCTGTAAAAGCAAAGGCTGGCTGTGCTAGTGCAGCCCTGTGGGAAGTTTTCTTCCACAGAGGCTGAGTAGAACAGTCCTGCTAAAGAAACCAGTGGAATAAGAACAGTCAACGTAGGAAGAGACAGAA chr4 + 94230402 36190585 36190584 36190800 36190585 36190584 36190800 216 TGTACTAATTGTGCCTAAAAAGCTTAATTCCCATCCAGGTCCACAGGTGGAAGAACACATAAACCGGTATCGTGACAGGAAGCAGGAGGCTGTAAAAACACAAGCTGTTGGTGCTGGTGCAGCCCTGGGGGAAGGTTTCATCCACGCTGGCCGAGTAGAACAAGCCCGCTAGGGAGAGGAGGGGAACGAGCACGGTCAGCGTGGGCAGGGAGGGGA ..:.::....:.....:..:..:.....x........:.....x...........:.....x..:.....x..:.:...x.:x..x...........:..x.:....x:x.....:...........x......x....x.....:xx...:..........:x..:....::..:.xx..x....::..x..:....:...:..x..:..x:.:. 216M 162/216 75.0% 216/94230402 0.0% 0/216 0.0% 52330985 NA +4108 chr4 + 190214555 88523494 88523493 88523864 371 TTACCTGAGCGGCTTCTTGGAGAGCGGGCACACCAGGAACTCCAGCAGCGCCGGATCGAAGTCGCGGGGCGGCTC---CTCAGTCTTCTTGCCCCGGTCG---GCCAAAGGCCGCGACCCCGACGCGTGCAGGCACCTACGGGCGACCGCGGACGGCGGCGCGCGCGTTCCC-CGCAGCGCTGAGGCGAGCCTGCAGCGTGCTCCACTCA----GCATGGTCTGGCAGCCGGAGACCAGGCCTCACCGCAGCCTCGCCACCCGTGG--CCGAGCTCCCGGCTTCCCGTTCGTCCAGGCCAGCCGGGCAGGCCCCGCCCCCTGGTCCTCCAGGAAACGCTGCCGAGGAGTAGGCGGGGCGGGCGCTTTG--GTTCCGAGGGTGCTTC chr4 + 94230402 36191556 36191555 36191909 36191556 36191555 36191909 354 TCACCTCAGCGGCCGCTTGGAGAGCGGGCACACCAAGAAGCGCAGCAGCGACGGCTCCA------GGGGCCGCCCCGGCTCGGGCCCccgctcctggccgctcgcc-----ccgcggctcc----cccgccgctccccgcag--caccgccgcc-gcgccgcgcccgcaaccgcgtagcatggcggctccccggcacgccgctccgcctccggtgcgcggcggagccgtgccgggctgcgcgccgccgccgccgcg----ctgtgGTTCCGGG---GCGGCTCGCCGCTCGGCCGCTCTCACCGTG-----ACCGTCTCCGGG--CTCGCAGGTGTACTTCGAAGGCGAAGAAGGGGAAGGAGTCGGGCTGTGCCGGGAGCTCTTC .:....x......:x....................:...x:x........x...x..x.------.....x..:.---...:.x.::.:xx:..:..:..---...-----.....:.:..----.x:..x.x:x..::.:.--x.....x.x.-...x.....x..:xx..-..:...::x.x...xxx..x...xxx:.....:.::x----..::..:xx:..x.:xxx:.:.::x..x:.:....x...x..----.:....--...:.---x.....:x...:...x..:xx.:x:...x.-----x...:.:..x..--...xx:.:x:::..x.x:...x.x..:x....x:..x.::xx.--..x...:.:.:x.... 59M6D10M3I22M3I3M5D10M4D17M2D10M1D17M1I37M4I42M4D6M2I5M3D30M5D12M2D43M2I16M 214/339 63.1% 354/94230402 0.0% 47/339 13.9% 52331938 NA +3702 chr4 + 190214555 88572289 88572288 88572370 82 GTGGTGGCACCCACCTGTAGTCCCAGCTACTTGGGCAGCTGAGGCAGGAGGATCGTTTGAGCCCAGGAGTTTCAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::x:......x.xx.x.:.x.::....:.....:..:..::.....:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 12539088 NA +3544 chr4 + 190214555 88572679 88572678 88572751 73 TGCACCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAAGGGAATTGCTTGAACTCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::..:.....x.xx.x...x::.......:...:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 12539474 NA +3168 chr4 + 190214555 88577544 88577543 88577628 85 ACTGTTTTTTGCATTAGAACAA----AAGATATCTTATACTATGTATATATGTGTGTATGTGTGTGTATATATATATAATAGGTTTGTA chr4 + 94230402 24523877 24523876 24523964 24523877 24523876 24523964 88 ATTGTTATTTGTATATAAATAACATGAAAATACAACAGGC-ATATATATATGTTTACTTGTGTGTGTATATATATATAATAATCTTATA .:....x....:..xx:..:..----..:...:xx:.x:.-..:.........x.::x.......................:x:..:.. 22M4I14M1D48M 61/84 72.6% 88/94230402 0.0% 5/84 6.0% 64053667 NA +3013 chr4 + 190214555 88577569 88577568 88577618 50 ATATCTTATACTATGTATATATGTGTGTATGTGTGTGTATATATATATAA chr4 + 94230402 72529254 72529253 72529303 72529254 72529253 72529303 50 ATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAA ..x.x...:.:.x.:..:.::.......:..........:.......... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 16048315 NA +3013 chr4 + 190214555 88577569 88577568 88577618 50 ATATCTTATACTATGTATATATGTGTGTATGTGTGTGTATATATATATAA chr4 + 94230402 72525681 72525680 72525730 72525681 72525680 72525730 50 ATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAA ..x.x...:.:.x.:..:.::.......:..........:.......... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 16051888 NA +3065 chr4 + 190214555 88577569 88577568 88577625 57 ATATCTTATACTATGTATATATGTGTGTATGTGTGTGTATATATATATAATAGGTTT chr4 + 94230402 72529252 72529251 72529308 72529252 72529251 72529308 57 ACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTT .:....xx...xx.x....:.:......:.........:..:.......xx...... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 16048317 NA +3065 chr4 + 190214555 88577569 88577568 88577625 57 ATATCTTATACTATGTATATATGTGTGTATGTGTGTGTATATATATATAATAGGTTT chr4 + 94230402 72525679 72525678 72525735 72525679 72525678 72525735 57 ACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTT .:....xx...xx.x....:.:......:.........:..:.......xx...... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 16051890 NA +3162 chr4 + 190214555 88590849 88590848 88590924 76 TACTCTTGTCCCCAGTGTT---TCT----TTTTTCCTTTTTCTTTCTTTTTTTTTTTTTTTTGAGACAACGTTTCATTCTGTT chr4 + 94230402 7740549 7740548 7740631 7740549 7740548 7740631 83 TACTCCCTTGATCAGTGTTGGCTCTACAGCTCTTCCTTTTGCTTTCATTTTTTTTTTTTTTTTGCAAAATGATTTATTCTGTT .....::x.xx:.......---...----:.:........x.....x...............x:x.x..:.x..:........ 19M3I3M4I54M 59/76 77.6% 83/94230402 0.0% 7/76 9.2% 80850300 NA +3453 chr4 + 190214555 88594973 88594972 88595044 72 GCGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.............::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 12561767 NA +3096 chr4 + 190214555 88601916 88601915 88601985 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 12568719 NA +15657 chr4 + 190214555 88605797 88605796 88606070 274 TACATGATTCCCTGAAAGATAAGAACAATGTTATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTGTCAAGGAAGTGGCCTGTGGGGGAAACCACTCTGTGTTCCTGCTGGAAGATGGGGAAGTTTACACATGTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAGCCAGGTAAGTGCACCTTATCTGTCT chr4 + 94230402 36202311 36202310 36202583 36202311 36202310 36202583 273 TACATGACTTACTGAAAAAAGAGAA-AATGCTATGCTGGGGTTACTCATCTTTTGGACAACCTGGGATAGGTAGCAACCTCCAGGTCATCATTCCCGAACCACAGGTGTATGGATTCATTCACGACAGAAATGTCAAGGAGGTGGCATGCGGAGGAAACCACTCAGTGTTCCTGCTGGAAGATGGGGAAGTGTACACCTGTGGCTTGAACACCAAAGGCCAGCTGGGGCATGAGAGTGAAGGAAGCAAGCCTGGTAAGTGTGTCTCTTGCATCT .......:.:x......:.x:....-....:....:.....x..:.x:...:.x..x........x..x:.:.x......x....xx..::.xx.:..:..x.......:...:.....x:x:.......:.........:.....x..:..:...........x..........................x.....x.....:...........:..x..:.....x........x.......:......x........:::..:x.x::... 25M1D248M 213/273 78.0% 273/94230402 0.0% 1/273 0.4% 52403486 NA +3265 chr4 + 190214555 88609280 88609279 88609337 58 CTCAAAACAAAACAAACAACAACAACAAAAAA--------------------CCCCAAAATAAATAAATAAATAAAAA chr4 + 94230402 14806925 14806924 14807002 14806925 14806924 14807002 78 CTAAAAAACAAACAAACAACAACAACAAAAAACCCCAAACAACAAACCTCTCCCCCAAAACAAACAAACAAATGAAAA ..x....xx.......................--------------------........:...:...:....:.... 32M20I26M 51/58 87.9% 78/94230402 0.0% 20/58 34.5% 73802355 NA +3111 chr4 + 190214555 88612259 88612258 88612350 92 CTCACATTAGCAATACCCTTATGTGAC--CAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAAGAAGGAGGCATTTCAAAGA chr4 + 94230402 87420476 87420475 87420569 87420476 87420475 87420569 94 CCCATAATGGAGACAGTCTTAATTAACAATAGTTATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAA .:..:.x.:.x:.:.x:....xx.:..--:.::.:...........:.:........:.x:x.x.....:.x.:...::...:x.:.x....:. 27M2I65M 59/92 64.1% 94/94230402 0.0% 2/92 2.2% 1191783 NA +3070 chr4 + 190214555 88617334 88617333 88617433 100 AATAAGAGCTTGCAGAGAGCCCTTAACAACAACAACAACAAAAACAAACAAAATCCCCAACATTTTCCACTTCAAATAGATTTGTGATTAGTTTATCACA chr4 + 94230402 6980624 6980623 6980720 6980624 6980623 6980720 97 AACAGGAAATTACTAGAAATGTGTAACAACAACAACAACAAAAAAAACCAAACTGCTTTACAGTTTACGTTTAAAAAATAATTCTGTTTA---CATCACA ..:.:..:x..:.x:::.::x:x.....................x..x....x.x.::x...x...x.::..x...x.x.x..x..x...---:...... 90M3D7M 65/97 67.0% 97/94230402 0.0% 3/97 3.1% 81636710 NA +3681 chr4 + 190214555 88627765 88627764 88627846 82 ATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::........:.--....:.:...........::........x.:x.x...x.:........::.:..x:xx:..:..:.. 13M2D67M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 12594567 NA +3173 chr4 + 190214555 88636998 88636997 88637058 61 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTAGGAGAATTGCTTGAATCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:.........:.::........x:xx.x...x::......:..:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 12603794 NA +10269 chr4 + 190214555 88649830 88649829 88650018 189 TCTCTTTCAGAACAAATTGGAGCTCTGGCAGATCAGCATATCATTCATGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATTCTGTGGCAGTGCCCAGGTAAGAAGGTTTTCAAATG chr4 + 94230402 36216173 36216172 36216357 36216173 36216172 36216357 185 TTTTTCTCAAAACCAATTGGAGCCCTGGCAGGGCAGCACATAGTGCACGTGGCCTGCGGAGAGTCCCACAGTGTGGCACTCAGCGACCAGGGCCAGGTCTTCTCCTGGGGTGCAGGCAGCGATGGACAGCTGGGCCTCACCACTATTGAAGATGCAGTGACAGTACCAAGGTAA----ATCTTTAAGTG .:.:.:...:...x.........:.......:x.....:..x:.x..:.....x..:..x............x....x.....:....::......x.x..:..:...........x..:.....x.....:..x....:x....:...:...x.x...:....:..x......----:.:..:..:.. 174M4D11M 142/185 76.8% 185/94230402 0.0% 4/185 2.2% 52433657 NA +6079 chr4 + 190214555 88651959 88651958 88652113 155 ATTGTGTTTGTGTGTGAATATCTATCTGAAAAAGAAAGCCTTTTCTGTTTTAGGTTAATACAAAAGCTGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGCGGCTGGTAAAGTAACATTAAACATATGCTA chr4 + 94230402 36217743 36217742 36217890 36217743 36217742 36217890 148 ACTGTATTTGTAAATGATTAT---TCTAAAATAATG----TCATCTTCTTCAGGCTGATAAAGAAACTGAACCAACAGACAATACTGCAGATTTCCTGTGGAAACTGGCATTGCCTGGCTTTGGCAGCAGGTACTGTAGTGTTCATTATTTATTA .:...:.....:x:...x...---...:...x.:x:----.:x...x:..:...:.:...x.:..:........:..:......:.:..::..........x............:.....:.x..:..x....xx...:::..x.x:..x.::.. 21M3D12M4D115M 104/148 70.3% 148/94230402 0.0% 7/148 4.7% 52434216 NA +14871 chr4 + 190214555 88652686 88652685 88653093 408 CTCTGTTATATCACTTGGGAGTTTTGGTTTTGGC--------AGTCTGATAGCATGAAGTATCTCTGTTCCTTTGCTCTTGGGTGGGTTTGGTGTTGGGGGGCAACTGGCAAATGACCCTAATAACTAGATTATTTTTGTGTGTGGAGCTTGTATCATTTTATGGTAATACCAG-----TTATCCTGTTATTTCAGATGGCCAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGAAGGAGTTCCCCTCCCAAGCCAGCCCACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCACAGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGATGAAAAAGGTA chr4 + 94230402 36218798 36218797 36219200 36218798 36218797 36219200 403 CTCGGTTATG-CATCTGTGTATTTACCTTTTGGCTTCACACTAGGCTTATAGCAAAGGATGTCTTGCTTGCTTTTTCCATCATGAGGTTTGG-GTGGGAGAGAAGC----------CCCCAATGCTAGTGCTTGTTCAGTTTGACAAACTTGC----TTTTCTGTTGA--CCAGCTTTTTTCTTTCTTTGTTTCAGATGGCCAGTTCTTCACGTGGGGGCAGAACAGCTATGGTCAGTTGGGCCTGGGGAAAGAATGTCCGTCCCAAGCAAGTCCACAGCGTGTCAAGTCTCTTGATGGGATCCCTTTGGCCCAGGTTGCTGCAGGTGGAGCCCACAGTTTTGCCCTCTCTCTCTCAGGAGCTGTGTTTGGCTGGGGGAAGAACAGCTCAGGACAGCTGGGACTAAGTGATGAACGAGGTA ...x.....:-..::..x.x:...xxx.......--------..x..x......x::::.:...:xx..x....x::.x.x:xx:.......-..x..:.:.x.:.----------...:...:x:x:x::.xx..:x..x..xx:.:....:----....x..x.:.--....-----..x.:::x..:......................x.....:x........:....x...:.x...:.:.....:..:.x:..x........x..:......x.x..x.:...:..x..x........x:....:.....x.....x..x..:..:.....:........x.................x.............x...:.::x.x..:.....:..:..x.........x:..... 10M1D23M8I50M1D13M10D37M4D11M2D4M5I242M 280/390 71.8% 403/94230402 0.0% 31/390 7.9% 52433888 NA +9125 chr4 + 190214555 88652867 88652866 88653099 233 AGATGGCCAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGA---AGGAGTTCCCCTCCCAAGCCAGCCCACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCACAGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGATGAAAAAGGTAGGTAAA chr4 + 94230402 36179412 36179411 36179644 36179412 36179411 36179644 233 AGGAGGCAGTCTCTTTACCTGGGGCCAGAATACCCATGGACAGCTTGGAGTGGGGAGCCAAGACCTGCTCATCT---CCAAACCGCAGCTGGTGAAAGGCCTAAAGGGCATCCCACTTGCTCAAATTGCTGCTGGAGGAGCTCACAGCGTTGTTGTGTCACTCTCTGGAGCTGTATACTCCTGGGGAAAGAACGATTTTGGACAGCTGGGACTTGGACATACAGAAGGTATGAAAA ..:x...x:x:....:........xx....:.x......:........xx.:....---.:..x:.x.:.x:.:---...:x..:...xx.....::xx...::....x........x.....::.x.....:.....:.........x...::x....x.....x........x.x:xx......:.x...::..x::..:.....:..:..::.xx..:x.:......x.x... 56M3I15M3D159M 159/230 69.1% 233/94230402 0.0% 6/230 2.6% 52473455 NA +7006 chr4 + 190214555 88654027 88654026 88654140 114 TTTAATTTATTCTA----GATCGAGAATCTCCATGCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCTATATTAGTTGTGGAGAAGAACACACAGCAGTTCTCACAAAGGTAAGGA chr4 + 94230402 36221573 36221572 36221690 36221573 36221572 36221690 118 TTTACTTTGTTCTACGCAGACCGAGAATCCCCTTGCCATGTGAAGCTATTGCGGTCTCAGAAGGTTGTTTACATCAGCTGTGGAGAGGAACACACAGCAGTTCTAACAAAGGTAAAGA ....x...:.....----..:........:..x........:..:..x..:..xx.x..:..:.....:..:..:..:........:.................x..........:.. 14M4I100M 93/114 81.6% 118/94230402 0.0% 4/114 3.5% 52432454 NA +14154 chr4 + 190214555 88655152 88655151 88656047 896 TATGGTGTTTG-TTCCTTGTTAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGTTCTAGAGCTGATGGGTAGTGAAGTAACTCAAATTGCTTGTGGCAGGTGAGTG-------------------TTCCTC-----------AAAGCTTGCTTGTATTCACTAGGACCCAGAAATTGGTCTTATCTTTGTAGTGATGAAGAATGTGATTATACCTAGTCACCGTCATTTTAA---------GAGATCTTAACTGCATGCA--------CGCCTATGGTGAAATGTGGAGAAAGACCTTGATAGAGTG-TGGCAAGGAAGGGTTTTAGATAAGCAGAGCAACACGGAGACA----TTAGGCTTCTTTTGGGATAAAGAGTAGCAGGATGTGGGGAAGGGATAAAGAAAGGAAAAGTGAGAGAGTCCCAAAGAACTTCTTG-----GAAATTTTTGCCTGAGTCTACCCTGCTTCTCTCTGTTCATCTTAGAGGCCACATGCAGTAGATCATTCAGCTCTTTCCTGACTTGCCAC--CCTCCTCATGATCTAGAGTGTTAGAGGATAGTATTATGGAG-AGCAGCCGCTGCAAGAAGAGTCACGTGTTAACATGGGAAAGGCTCTATAGGAGCACCCTGTGCTGTGCACATGTGGAAGTTA----AAAGTCAGAGTCAGAGTGTACATC-----CACATTAGTAG--AAACTATGCTGATGAGTTAAATTAT---------TTTTTCACAGACAACATACCCTAGCCTTCGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCAAGAGGTCAATTAGGAACTGGGCACACTTGTAATGTTAAGTGCCCATCTCCTGTCAAGGGTTACTGGGCTGCCCACAGTGGCCAGCTTTCAGCCCGAGCTGG-------TAAGAATGATT chr4 + 94230402 36222673 36222672 36223579 36222673 36222672 36223579 907 TATGCTGTCTGATTTGCTAACAGAGTGGAGGGGTGTTCACGTTCGGTGCAGGTTCCTGCGGGCAACTGGGACATGATTCCATGAATGATGAAGTGAACCCCCGAAGAGTTCTTGAGCTGATGGGCAGTGAAGTGTCCCAGATTGCCTGTGGCAGGTGAGTACTGTGTGCAGTCAAAAGTATTCCTCCAGTGGAGGTTAATGCTGACGCCGAGTCTTGTAAATAGAAGGAATAGTCTTGCTTTTGCA-TCACG-----TGTGTCAAAATTAAGTTAATGTAAATTTTATTTCCCTGGAAGATTTTAAGTCCCTCTAATGGAGATTGGTTTTTGTGCCCCAGGCATAGACACCTTTCTGTTTTAATGGTCAAGACAGACCGTAGGGCTGCAGCCCCTTATGGTCACAAGATTCCAGCCTCTTTCAGGA-------------------GGAAAGAAGTTAGTAACACAAGCGTTATGTTGTT-------GCCTTTTATGTGTGCAGGCTTAGCAAATGACTAAGCTGAATCAGTCTGTTATCCTGATATGAGTTGTGTGCTCCTGCAGGCTGCTCTTT--------GTCACTTCCACCTGAAGAGCT-GCATCCTATAAAGTGGTGCCATCAAGTGGCAGAAGCTG------------------AGCATTGG---TGCTTTGCACCAGCTTC--------TGCCCTGGGGGAAGTGAGAATAAATTTTAGGTTTGATTTTTTTTTTTTTTCCTTTTAATTGTTAAAC-------ATGGCCCAAACTTTGTACCCATCTCTGTTACAGACATCACACTTTAGCCTTTGTGCCTTCTTCAGGAATGATCTATGCATTCGGCTGTGGAACAAGAGGCCAGCTGGGAACTGGGCACACTTGCAATGTTAAGTGTCCCTCTCCCGTGAAGGGTCACTGGGCAGCTCACAATGGGCAACTCTCAGGGAAACCTGGTATGTACTATGAATGATT ....x...:..-..:x:.:x:..........x.....:..x..:..:..x........:........x.....:..:..............:..x.....:x..........x...........:........:x.:..:.....:..............:-------------------......-----------..x...x:.x:xx.x..x:xx::.:xx.:::.x.:.....:::....:.-.x.:.-----....x:x.x.::x...:.x:..x.x...x.---------:....:....x.x.x.x:.--------:.x:.x.x...xxx::x.x.x.:.x.....xx.:xxx.:-...:x.:..x:.:::x...:xxx....xx.xx:.:..xx...----.:x:..:.....::...-------------------..:...:::.x.:x..x:x..:x..x.x:xx..:-------:.:.:..:-----.x.:x:..x..xx:x.x...xx...xx..xx......xx:..x.x.x.xxx::..::x.xxxx..xx.x.......--------.:...--..x...x.x..x..-.x:.x:..x.:::.:..:::..x:..-:....xx....------------------.:...x..---x...:.::.xx...x:.--------...x.xx.x......x.----...x.:x::..:x..x.x.x:x.:-----.x:x...:.x.--....-------...:x::...:.x.---------.:.x.:.......x..:..::.......:...........x...x.x...........:..:......:.......:..::.:.................:...........:..x.....:..x......:.......x..:....:...x..:..:....xxx:.x....-------..x........ 11M1I149M19I6M11I49M1D5M5D30M9I19M8I39M1I42M4I17M19D34M7D8M5I76M8D5M2I14M1D26M1I11M18D8M3D17M8D17M4I24M5I11M2I4M7D14M9I172M7I11M 536/819 65.4% 907/94230402 0.0% 165/819 20.1% 52432479 NA +6539 chr4 + 190214555 88658400 88658399 88658496 97 TTTTTTTTTTGACAGATCGCTTTAAATATCATATCGTTAAGCAGATCTTCTCTGGAGGAGACCAGACTTTTGTACTTTGCTCCAAATACGAGGTAAA chr4 + 94230402 36224062 36224061 36224158 36224062 36224061 36224158 97 TTCTTTCCTCAACAGATGCCTGTAAATATCACATTGTTAAACACATCTTCTCTGGAGGAGACCAAACGTTCGTGCTTTGCTCCAAATATGAGGTAAA ..:...::.::......xx..x.........:..:.....:..x....................:..x..:..:..............:........ 97M 80/97 82.5% 97/94230402 0.0% 0/97 0.0% 52434338 NA +7383 chr4 + 190214555 88662400 88662399 88662561 162 CTTCTTTTTACTGTTACATTTA-ATTCTC-CAGAATTATTCTCCTGCTGTTGACTTCAGGACTATGAACCAAGCACATTATACCAGTTTAATAAATGATGAAACCATAGCAGTTTGGAGACAAAAACTCTCAGAACACAACAATGCAAATACAATCAAGTATGT chr4 + 94230402 36224917 36224916 36225080 36224917 36224916 36225080 164 CTTGTCTTTGCTGAAATCTGTATCTTCTCACAGAATTCCTTGCCTGCTGATGATTTCCGGACCATAAATGAAACACGTTACACCTGTTTAATAAATGATGAAACTATAGATGTCTGGAGGCAAAAGCTTTTAGAAAAGAACAGTTCTAATTCTGTCAAGTAGGT ...x.:...:...xx.:x.x..-x.....-.......x:.:x.......x...:...x....:..:..:x..:...:...:...x...................:....xx..:.....:.....:..:.:....x.x....:.x.x...x.x:.......x.. 22M1I6M1I134M 121/162 74.7% 164/94230402 0.0% 2/162 1.2% 52437483 NA +8634 chr4 + 190214555 88667327 88667326 88667492 166 AGTGTTTGCTTTTTCTTTTA-TTATAT-----ACCTTTTTGATTTTGTTTGTT-TAGAATTGATGAACATTTTAAAACGAGTCCCAAAATCCCTGGGATTGACCTGAACTCAACTAGGGTGTTATTTGAGAAGTTAATGAACTCTCAGCACTCCATGATTCTAGAACAGGTAT chr4 + 94230402 36227285 36227284 36227457 36227285 36227284 36227457 173 AGTGTTTTCTCTTCCTTCAACTTATGTCTGTGATCTTTTTTTTTTTTTTTTTTGTAGAATTGATGAGCATTTTAAGACCAGTCCAAAGATCCCAGGGATTGATTTGAACTCCACTAGAGTGCTGTTCGAGAAGCTGATGAACTCGCAACATTCAATTCTCCTAGACCAGGTAT .......x..:..:...:x.-....:.-----.:......xx....x...x..-............:........:..x.....x..:.....x........::.......x.....:...:.:..:......:.:........x..:..:..x..xx.:.....x....... 20M1I6M5I21M1I119M 132/166 79.5% 173/94230402 0.0% 7/166 4.2% 52440042 NA +12038 chr4 + 190214555 88667875 88667874 88668085 211 TCTTTTCCCTCATACAGATTTTGAACAGTTTTGAAAGTTGTCTGATTCCCCAGTTGTCAAGCTCACCACCAGATGTTGAAGCCATGAGAATCTATTTAATACTACCTGAGTTTCCCCTACTCCAGGATTCCAAGTATTATATAACATTGACTATTCCCTTGGCTATGGCCATTCTTCGGCTGGATACAAACCCCAGCAAAGTACTAGGTGA chr4 + 94230402 36228376 36228375 36228583 36228376 36228375 36228583 208 TTTTTTCCCTC---TAGATACTGAAGAGCTTTGAAAGCTTTTTGATTCCTCAGTTGTCCAGCTCACCACCAGATGTTGAGGCAATGAGGATCTATCTGATTCTCCCTGAATTCCCACCCTTCCAAGATTCAAAGTATTACATCACATTAACGCTTCCTCTGGCAATGGCTATTCTGCGCTTGGACACCAACCCTAGCAAAGTTCTTGGTAA .:.........---:....x:....x..:........:.x.:.......:........x....................:..x.....:......:.:..x..x.....:..:..x.:x:....:.....x........:..x.....:..xx....::....x.....:.....x..x:....:..x.....:........x..x...:. 11M3D197M 164/208 78.8% 208/94230402 0.0% 3/208 1.4% 52439499 NA +10027 chr4 + 190214555 88669821 88669820 88670034 214 GATTACATGTTGAAATATGTCTTTTCTTTCTTTCTAAAGATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCTCTATAAAGGTGCAGTCCTTTATCTACTGAGGGGAAGAAAGACATTCTTAATTCCCGTACTGTTTAACAATTATATCACAGCAGCTCTCAAACTCTTGGAGAAGTTATATAAGGTGAGCATAGG chr4 + 94230402 36230197 36230196 36230408 36230197 36230196 36230408 212 GATTCCACATTTATTTTGATGTTCCTCTTCTTTCCA--GATAACTGGTGGTCTCAAGTGTGCCCAAGATATTTCCTCAGGCTCGTGGATCTCTATAAAGGCGCAGTGGTTTACCTCCTCAGCGGAAGAAAAACGTTGTTGATCCCAGTCTTGTTCAGTAGCTACATTACAGCTGCTCTCAGGCTTCTGGAGAAACTCCACAAGGTAAGCCTGGG ....x..::..x.xx.xx:.x..::::.......:.--.................:..:.....:.:.......x.x.:...x..::.:...........:.....xx....:..x..x..x........:..:..x..:..:..x..x:....:.::.::..:..:.....x.......::..::.......::.x:.:.....:...x.:.. 36M2D176M 151/212 71.2% 212/94230402 0.0% 2/212 0.9% 52439624 NA +8798 chr4 + 190214555 88670128 88670127 88670265 138 TTCTTCATTAGGTAAATCTTAAAGTGAAGCATGTGGAATATGATACATTTTACATTCCTGAGATTTCCAATCTCGTGGACATTCAGGAAGACTACCTCATGTGGTTCTTGCATCAAGCAGGGATGGTAAGA--ATTCATA chr4 + 94230402 36230839 36230838 36230978 36230839 36230838 36230978 140 TTCCTCCCTAGGTAAATCAGAAAGTTAAACATATAGAATATGATAAGTTTTATATCCCTGAGATTTCCAGCTTGGTGGACATTCAAGAGGACTACCTCATGTGGTTCCTACATCAGGCTGGAATGGTAAGAGCATTCACA ...:..x:..........xx.....x..:...:.:..........x:.....:..:.............:::.x...........:..:..................:.:.....:..x..:.........--.....:. 131M2I7M 113/138 81.9% 140/94230402 0.0% 2/138 1.4% 52439289 NA +9054 chr4 + 190214555 88676196 88676195 88676426 231 CTTTTTATTTTTCTT-TACACAGAAGGCTAGACCATCAATAATACAGGTAA-------------ATGA-TCCTTTTTAAATTTGCTTTTATATTTTTCCAGCTATACTTTCTGTGGAATAGTATAATACTGTCAATAATGTGCTTTATTCTAGGATACTGTAACACTTTGTTCCTACCCTTTCATCTTTGATGCCCAAGCCAAGACCAAAATGTTACAGACAGATGCTGAACTACAGATGCAGGTA chr4 + 94230402 36232153 36232152 36232378 36232153 36232152 36232378 226 CTTTTTTTTTTTCTCCTTCACAGAAAGTGAGACCATCTATCATGCAGGTAAGAAAATTGTCTTTATGACTCCTATTTGAAAAAGTGTTTATAG-----AAGCTGTAA-----GTGG----GTACAGATCTGTCTGT------CTGTCTTGCAGGATGCTGTGACTCTCTGTTCTTATCCTTTCATCTTTGATGCTCAGGCTAAGACCAAGATGTTACAGACAGATGCAGAACTACAGATGCAGGTA ......x.......:-.x.......:.:x........x..x..:.......-------------....-....x...:..xxx.:x......x-----x....:..x-----....----...:.:xx.....x:.------..x.x..x:.....:....:..x..:.....:..:.................:..:..:........:.................x.................. 15M1I35M13I4M1I24M5D9M5D4M4D16M6D104M 170/211 80.6% 226/94230402 0.0% 35/211 16.6% 52444043 NA +13416 chr4 + 190214555 88677958 88677957 88678141 184 TTCCAGGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCTTCTCACCCTGGAGCCTCTGCTGGCCAGAAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGAGCATTCATTCTGATATTGATTTGAAAAAGCCTCTCAAAGTGAGTT chr4 + 94230402 36233645 36233644 36233828 36233645 36233644 36233828 184 TTACAGGTGGCAATAAATGGTGCAAATTTGCAAAATGTCTTTATGCTTCTCACCCTGGAGCCTCTGCTGGCCAGAAGCCCTTTCCTGGTACTTCACGTTCGCAGGAGTAATTTAGTCGGTGATGCTTTAAGAGAGCTGAGTATCCATTCAGACATTGATTTGAAAAAGCCTCTTAAGGTAAGTT ..x.........:.x.....x..x..::....:........:......................................:........x................::..::.x..:..x.....::.............:..:.....x..:....................:..:..:.... 184M 157/184 85.3% 184/94230402 0.0% 0/184 0.0% 52444313 NA +9325 chr4 + 190214555 88680091 88680090 88680241 151 AGGTAATCTTTGATGGTGAAGAAGCAGTGGATGCCGGTGGTGTTACAAAGGAATTTTTTCTTTTGCTGTTAAAAGAACTTTTGAATCCCATCTATGGAATGTTTACCTACTATCAAGATTCAAATCTCTTGTGGTTTTCAGACACGGTAAG chr4 + 94230402 36234450 36234449 36234600 36234450 36234449 36234600 151 AGGTCATCTTCGATGGTGAGGAAGCTGTTGATGCTGGAGGAGTGACGAAGGAATTTTTCCTCCTGTTGCTAAAAGAACTCCTCAACCCCATCTACGGCATGTTCACTTACTACCCGGAGTCGAACCTGCTGTGGTTTTCAGACACGGTGAG ....x.....:........:.....x..x.....:..x..x..x..:...........:..::..:..:..........::.x..:........:..x.....:..:.....:.x:..x..:..:..x:...................:.. 151M 119/151 78.8% 151/94230402 0.0% 0/151 0.0% 52445641 NA +11426 chr4 + 190214555 88681109 88681108 88681332 224 GCCAGAAACATTGCATTTCTTTTTAACACATTTGTATGTGTCCTAAAAAGTGTTTTGTAGAGCACAACTGGTTTCACTTGATTGGTATAACCTGTGGACTAGCTATCTACAACTCCACTGTGGTCGATCTCCACTTCCCATTGGCTCTCTACAAGAAGTTACTCAATGTAAAGCCTGGCTTGGAAGACTTAAAGGAGTTGTCACCCACTGAAGGAAGGTACAAA chr4 + 94230402 36235925 36235924 36236145 36235925 36235924 36236145 221 GCCAGAAACGCTGCATCTCATCAGGATTTCTCTGTGTG-GTTTTGAA--GTGTTTTGTAGAACACAACTGGTTTCACTTGATTGGCATCATATGCGGTCTTGCAATATACAACTTCACAGTGGTAGACCTTCACTTTCCCTTGGCTCTGTACAAAAAGCTCTTGAATGTGAAGCCATGCCTAGAGGATTTGAAGGAGCTGTCCCCTACAGAAGGAAGGTATGAA .........::.....:..x.:xx:.:x:x.:...:..-..::.:..--............:.......................:..x.:x..:..x..x..x..x.......:...x.....x..:..:.....:..x........x.....:...:.x:.x.....:.....xx..:.:..:..:..:......:....x..:..x...........::.. 38M1D8M2D175M 167/221 75.6% 221/94230402 0.0% 3/221 1.4% 52445184 NA +5284 chr4 + 190214555 88686710 88686709 88686808 99 TTCCTTTTCTGTCATTCTATGATTAGGAGTCTCCAAGAGCTTTTAGATTACCCCGGGGAGGATGTGGAGGAGACTTTCTGCCTCAACTTCACGGTAAGA chr4 + 94230402 36237159 36237158 36237255 36237159 36237158 36237255 97 TTTCTTTTCT--CGACTCACGTATAGGAGTCTTCAGCAGCTTTTAGATTATCCCGGGGAAGACATAGAGGAGACATTCTGCTTGAATTTTACAGTAAGA ..:.......--.:x:::.:.xx.........:..:x.............:........:..::.:........x......:.x..:..:..:...... 10M2D87M 74/97 76.3% 97/94230402 0.0% 2/97 2.1% 52449551 NA +3098 chr4 + 190214555 88689498 88689497 88689544 47 AACAAAGCAAGACCTCATCTCCCCCCGCCCCCGCCAAAAAAAAAAAA chr4 + 94230402 56761782 56761781 56761828 56761782 56761781 56761828 47 AACAAAACAACACCTTCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAA ......:...x....:x:.:......x.....x.............. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 31927716 NA +12712 chr4 + 190214555 88704058 88704057 88704285 228 AGACTTTGAGCTAAATGTATTTTCTTTTGTGTTCTGGC-----AGGCAGGAATTTGTGGATGCTTATGTGAATTATGTCTTCCAAATCTCAGTTCATGAATGGTACACAGCCTTCTCTAGTGGCTTCCTAAAGGTGTGTGGTGGCAAAGTACTTGAGCTCTTCCAGCCTTCAGAACTGAGGGCTATGATGGTGGGGAACAGCAACTACAACTGGGAAGAACTGGAAGAGGTAA chr4 + 94230402 36241308 36241307 36241540 36241308 36241307 36241540 233 AGGCATTTATGTAAAAGTGCTTTTCTTTGTCTCTCAATGTCCTAGGGAGAAATTTGTCGAAGCCTATGTAAATTACATCTTCAACTGCTCCATCCATGAGTGGTACACAGCCTTCTCCACTGGCTTCCTGAAAGTGTGTGGTGGGAAAGTCCTGGAGCTATTCCAGCCCACAGAGCTCAGGGCCATGATAGTTGGAAACAGCAACTACAACTGGGAGGAACTGGAGGAGGTAA ..:.x..x.xx....x..::...::.....x.::::::-----...x..:.......x..x..:.....:.....::.....x.xxx...x:.:.....:.................:.x.........:..:...........x.....x..x.....x........:x....:..x.....:.....:..x..:....................:........:....... 38M5I190M 177/228 77.6% 233/94230402 0.0% 5/228 2.2% 52462750 NA +7901 chr4 + 190214555 88704468 88704467 88704618 151 TTCCAAGATACATTTTTTTCTTTTTCTCTTTTTTGGACAGACTGCCATCTACAAGGGAGATTACTCGGCCACACATCCCACTGTAAAACTATTTTGGGAAACATTTCATGAGTTTCCATTGGAAAAGAAGAAGAAGTTTCTCTGTAAGTAT chr4 + 94230402 36242031 36242030 36242181 36242031 36242030 36242181 151 TTGCTAGATGCAATTATGTGACTTTTTGCTTTCCTAACAGAGTGCTGTCTATAAGGGAGACTACACTGCGACGCACCCAACGGTGAGAATGTTTTGGGAAACCTTTCATGCATTTCCCTTGGAAAAGAAGAAGAAATTTCTCTGTAAGTAT ..x.x....:..x..x.x.xx:...:.x:...::x:.....x...::....:........:...x.x..x..:..:..x..x..:.:.x.:...........x.......x:.....x.................:............... 151M 114/151 75.5% 151/94230402 0.0% 0/151 0.0% 52462437 NA +14442 chr4 + 190214555 88706736 88706735 88706960 225 TTCTCGTTCTCCCCAGTGTTCCTGACAGGCAGCGATCGGATTCCCATCTACGGCATGGCCAGTCTGCAGATTGTCATCCAGTCCACAGCCAGCGGGGAGGAGTACTTGCCGGTGGCCCACACTTGCTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGACCCAGGCCCTTGACAACTATGAAGGGTTTAGTTTGGCCTGA chr4 + 94230402 36242803 36242802 36243027 36242803 36242802 36243027 225 TTCTCTCTGCTTCCAGTGTTTCTGACTGGCAGCGACCGCATCCCCATCTATGGCATGTCGAGCCTCCGCATTGTCATCCAGTCCACCGCCAACGGGGAGCAGTACCTGCCTGTGGCACACACCTGCTACAACCTCCTGGACCTGCCCAAGTACAGCAGCAAGGAGATCCTCAGTGCCCGGCTGATGCAAGCCATTGATCACTATGAGGGCTTCAGCTTAGCTTGA .....x:.x:::........:.....x........:..x..:........:......x.x..:..x.:x.................x....:.......x.....:....x.....x.....:...........:..x.....x.................:.....:..x.............:x..:...x....:x.......:..x..:..:..:..:... 225M 182/225 80.9% 225/94230402 0.0% 0/225 0.0% 52463933 NA +4318 chr4 + 190214555 88719582 88719581 88719727 146 TTCTCCTCCTC-CTTCTCCCCCCCTTCTCTTTCTCCTCCTCCTTCTCC----TTCTTTCTTCTCCTTCTTTTC-TTCTCCTCCTCCTCCTTTTCTC----CTCTCCTCCTCCTTTTTTCTTCTCCTTCTTCTCCTCCTCCTTCTCTTCCTTCTCAT chr4 + 94230402 50176266 50176265 50176419 50176266 50176265 50176419 154 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCT--CCATTCTTCACAT ..:..:x:...-..x...:..::::.::....x...x..:x...:.x.----........x:..:..x.x...-..:.:x..:..:.:....::..----.:.x.....:.x....:.:x..........:..:.:.....--:.x.:....x... 11M1I36M4I21M1I22M4I41M2D13M 99/144 68.8% 154/94230402 0.0% 12/144 8.3% 38543316 NA +3139 chr4 + 190214555 88719622 88719621 88719723 102 CTTCTCCTTCTTTCTTCTCCTTCTTTTCTTCTCCTCCTCCTCCTTTTCTCCTCTCCTCCTCCTTTTTTCTTCTCCTTCTTCTCCTCCTCCTTCTCTTCCTTC chr4 + 94230402 55147404 55147403 55147503 55147404 55147403 55147503 100 CTTGTCTTCCTTTCTTTCCTGTGATCCACCCTCCACCTCCAGCCTGTCTCATCTCCTCATCCTTTGTCCCCACCCTGTTCCT--TTCCCATCCTCTGCTTTC ...x..:.:.......::.:x.xx.::x::....x.....xx.:.x....x.......x......x.:.::x:...x:.:..--.:.:.x.:....x.:... 82M2D18M 64/100 64.0% 100/94230402 0.0% 2/100 2.0% 33572218 NA +8931 chr4 + 190214555 88728530 88728529 88728677 148 CCCTCACATGGACTTGGAATCAGTGTCTCTCTTGCTGATGAGCACCTCCAGGAGCCTCAGTTTCGCCTTTATGTGCTTATATTCACTGTATTCTTCAGCCATAGGAGTGCGGTCTTCCTTCTGGACATTTCTAATGCAAATAAAGGAA chr4 + 94230402 36247017 36247016 36247164 36247017 36247016 36247164 148 CCTTTACATGATCTTTGAGCTAATATCTCTTTTACTGATCAGGACCTCCAGCAGCCTCAGCTTGGCCTTAATCTGCTTGTATTCGTTGTATTCTTCAGCCATAGGAGTACGGTCTTCTTTTTGCACATTCCTAGTGGGAGTAAAAGGA ..:.:.....:x...x..:::.:.:.....:..:.....x..x........x........:..x.....x..x.....:.....::......................:........:..:..x.....:...:..x:.:....:.:. 148M 115/148 77.7% 148/94230402 0.0% 0/148 0.0% 52481513 NA +5805 chr4 + 190214555 88731318 88731317 88731430 113 AGGCACTACCTTCCATTCTGTCTGAAAAAGTTGTCTTCAAAATCCCGAAGTTTCTTTCGAATCCTTTTCTTTTCTTCTCTCATTTCCTGGAGGTGTTCCAGGAGTTCAGGTCT chr4 + 94230402 36248038 36248037 36248150 36248038 36248037 36248150 113 AGAAATTACCTCCCATTTTGTCGGAAAAAATTATCTTCAAAGTCTCTCAGCTTTTTTCTGATCCGCTTTTTCTCTTCCCTGACTTCTTGCAGCTGCTCTAACAGTTCAGGGCT ..:x.:.....:.....:....x......:..:........:..:.xx..:..:....x:....x:..:..:.....:..x.:...:..x..x..:..:.:x........x.. 113M 82/113 72.6% 113/94230402 0.0% 0/113 0.0% 52483280 NA +13380 chr4 + 190214555 88731993 88731992 88732238 246 ATGACATACATTGAGGCAGCATGGAGATTTGAAAGCCCTGTGTCCTGGCTGCATTTTGATGGTATTTTATCATCCATTGGGGAAATAAATCCATCAGCGTCATCTTCGAATTGGTCCAGAAAGCATCGTGCACTGAAATCGGTTTTCAGAGTGACCATGAAGTCTGGCTTCACATTGCTATCGTCTTCTGACCCCTCCTCTTCTTCCT----GGAGATACACAGCAACCCCAATAAAAATCTGGTCACTT chr4 + 94230402 36248726 36248725 36248975 36248726 36248725 36248975 250 ACAACATACATGGATGCTTCATGGAGATTTGAAAGCCCCATATCCTGGTTGCTCCTTGATGGTATCTTATCGTCCACCGGGGAAACAAAGCCATCGGCATCATCTTCTAGTTGATCCAAGAAGCTACGCACGTTGAAATCTGTTTTCATAGTGATTGTGAAGTCTGGTTTCACATTGCTGTCCTCCTCAGAGCCCTCCTCTTCCTCCTACAGAGAGGGACAGAACACCCCCATCACACAGTAAGTTGCTT .::........x..x..xx...................::.:......:...x::..........:.....:....::.......:...x.....:..:........x.:...:....::....xx..::.::.......x.......x.....:::..........:...........:..x..:..x..x...........:....----:...:x...x.:..x.....x:.x.x.x:x:..::... 208M4I38M 186/246 75.6% 250/94230402 0.0% 4/246 1.6% 52483267 NA +15378 chr4 + 190214555 88737137 88737136 88737630 494 AGAAAACAAAACCAAA-CAAAAAGCATTGTGGACAACAAAACCAAA---CAAA--ATAATCCCTGAAAGCGAAGTAAAAACAAAACAACAACAGACAATACAAAAAAGAGGG----GGGGAATAAAATGAAACCAAAGAAATCAACTAAATGGAACTGGAGAAATTAGCACTCTTTAGAGGAACTGTTCAAAGTTGGTTATATGTAGCTACTGATTTTTAGGGAA----TGCTGTAAGAAG-CCACCACCAA----AAGGCCCGATCACACCCCCTTTCCATTCACCGGAGGGGAGGGGAGGAGGGAGGGAACTGGTGCGGATTTAGCAATGGGTTAGCAGCTGG-GGTCTTCACCTTTATCTCCTTGAAGAAGGAAGCAGTTTCGCCCTCGATAATTGGCTGCAGCAAAGGGCTTCTCCGCTTGCTGGAGGGGGAACCCTGTGACAGGTGTTAACAAGTAGGTTACATTCCGAACCCCTTTCCCTTTC-CCTCCAGCTCTCGGCCTCCTCTGAC chr4 + 94230402 36252383 36252382 36252868 36252383 36252382 36252868 486 AGAAAGCAAGGGCAAAGAAAAAAAAAAAAAGAACCACCAAGCCAAAGTGCAAAGGATAATT-------GTGAGGTTTTTAGCAAAGTAAAATACATTATGTGCAAGGGAGGGAGAAGGGAAAGAACACAAAGCCAAGGGAATATTGTAGTCTTATCTACAACAAGGGAAGAATTTGATCAGAACTGGACA-----GGCTTAAAGCAGCTACTGATTTTTCAGGAAGACACACTGCAAAAAAATCAACACTGATGGAAAAAAAAAATCATTCTC---TTTCATT--------------GGTATAAGGGGAAAATTGATGCAAACTGAGCAATTAGTTAGCAGCTGGAGGTCTTCACCTTTATCTCCTTGAAGAAGGAAGCAGTTTCGCCCTCGATAATTGGTTGCAGCAAAGGGCTTCTCCGCTTGCTGGAGGGGGAACCCTGTGACAGGTGTTAACAAGTACGTTACATTATGAAACCCTTTCTCTTCCGCCACCTGCTCTCAGATCATTCTCAC .....:...::x....-x.....:x.xx:x.:..x..x..:.....---....--.....:-------.:..:..xxxx.xx...xx.x..:.x.:x..:::x..::.....----...:..x..x.::..:....:.:...xxxx..:x:xx.x..:x.:x..xx::x:xx:..x.xx:......xx..-----..:.xx.x.:..............x:....----::...:..:..:-:..x...::.----..::xxx:....:x.:.---..:....--------------..x:x.:..:.::..:..:...::.:.x......x:............-......................................................:............................................................x........x:...x.......:...:.-..x..x......:.x::x:...x.. 16M1I29M3I4M2I6M7D44M4I74M5D30M4I12M1I10M4I17M3D7M14D48M1I143M1I25M 334/465 71.8% 486/94230402 0.0% 50/465 10.8% 52484754 NA +9189 chr4 + 190214555 88739020 88739019 88739163 144 TTCTACTCACAATGATGGGTATGGTGTTAGCTCGGGAGAGGATCTGTTTGACCAGCCGGTACCTGTCGTATAGTGGCTTCATCACCTGCCGTTCGTTCTTTGTTACCTGAAAAGCAA----GAATGAGAGCTATGAGAAGCCTGCTGC chr4 + 94230402 36254612 36254611 36254757 36254612 36254611 36254757 146 TTCTACTCACAATGATAGGGATGGTGTTGGCTCTGGAGAGGATCTGCTTGACCAAGCGATACCTGTCATACAGTGGCTTCATCACCTGTCGTTCATTTTTGGTAACCTGTAAAGGAAAAAGGAATGAGAACCATGAG--GTCTGCAGC ................:..x........:....x............:.......:x..:........:..:.................:.....:..:..x..x.....x....x..----........:.:.....--.:....x.. 117M4I16M2D9M 121/142 85.2% 146/94230402 0.0% 6/142 4.2% 52484408 NA +6686 chr4 + 190214555 88746910 88746909 88747058 149 GAAAATTTACTACATCACATACCGGCCGTCCATGAATGCTTTCATAATATAACAGAGCTTTCTGCAGAGCCACTTTCTCATTAGCAATCTGGTCTTTGGTCATATCCTGTATAAA----CACAGGGATAGAGAATTGAAAGAGAGGAAAATGT chr4 + 94230402 36257947 36257946 36258090 36257947 36257946 36258090 144 GATAAAATGCTGCTGTACATACCGGTCTGCCATGAATGCTTTCGTAATACAGCAAGGCTTTCTGAAGAGCCACTTTCTCAGCTGCTATCTGATCTCTTGTCATGTCCTATAAAAAGCAGCACAGAGAGAGGAGA---------AAGAAAATGT ..x..xx.:..:.xx:.........:.xx..............:.....:.:..::........x...............x:x..x.....:...:.x.....:....:..x...----.....:..x..:::.---------.:........ 115M4I15M9D10M 107/140 76.4% 144/94230402 0.0% 13/140 9.3% 52488963 NA +13043 chr4 + 190214555 88747624 88747623 88747913 290 ATCGCACCTTAATGTCCTCAGGGCGGCTGCTTTCCGCTCGCTTCTCCTGGAGCTTCCTCTGAATAGATTCCAATGTGGCTTCAACACTGGGCTTTATTGCTTTATCCACCAGCTCTTGCTTCTTCTCATCTTCTTTCTCAAGTTGGGAACCAAAACTCTTGGGGAGTGTGTTGCTTCGCTGCCGCATCCTGGGAGTTAGGTCCTCTTCAGATATCTTTAGTTTTGATTCTAGTTGAGAAGATTTGGGGGTAAAGATATATGAGATTTATTTATTTATTTATTTTGAGATG chr4 + 94230402 36259357 36259356 36259634 36259357 36259356 36259634 278 ATTGTACCTTTATATCCTCAGGTCGGTTTGTCTCTGTTCGTTTTTCCTGAAGCTTCTTCTGGATAGAATCAAGGGTCACTTCCACAGCAGGCTTGGCAGATTTATCTGATAGGTCTTGTTTCTTGTCATCCTCCTTTTCAAGCTGAGAACCAAAGCTCTTTGGGAGCGTGTTGCTTCGCTGACGTACCACAGGGCCCAGGTCTTCCTCTGATATCTTCAGTTTAGACTCTAAACAGGGACATTTAGGGGAAGAGGAATA------------ATTTCTCTTTTTTAAAGTG ..:.:.....x..:........x...:.xx.:..:.:...:..:.....:......:....:.....x..x.:x..x:....x...x::.....x::x.x......::x:..x.....:.....x.....:..:..:.....:..:........:.....x.....:..............x..:.:.x::..:x::.....:..:..x........:.....x..:....:x:::.:.x....:....x.:..:x...------------....x.:.x....:.::.. 259M12D19M 198/278 71.2% 278/94230402 0.0% 12/278 4.3% 52488267 NA +6584 chr4 + 190214555 88748922 88748921 88749038 117 CAGAAGCCACAGCTCCAGAATTTTACCCACCTTTAAGTTGTCTCCGGAATTTGGCAAGGTCATTTGTCCATTTCAGAACCTCCGGATTGGCTGCTTTGTCACTGTGGGAAGGCTGAG chr4 + 94230402 36259695 36259694 36259810 36259695 36259694 36259810 116 CAGAAGGTACATCAACAGTGACT-GCTCACCTTTAAGTTGCTTTCGGAATTTGGCCAAATCATTTGTCCATTTGAGCACTTCAGGGTTAGCTGCTTTGTCACTGTGAGAAGGCTGGG ......x:...x.xx...x:x:.-:.:.............::.:...........x.::..............x..x..:..x..:..:.................:........:. 23M1D93M 91/116 78.4% 116/94230402 0.0% 1/116 0.9% 52489227 NA +16679 chr4 + 190214555 88749756 88749755 88750665 910 TGAGGGGACACTTACTCTGTACTTCTTCTCTTCTTCGAATCTATCTTCAAACTTCCGGATCTTCTTTTTAAGGCTCTGAATCCTTCGTGTGAGCTGGGCAGGTGTCAGGTCCTCTTGCTCATCATCATAGGACCCCAGAGAGGAGCTTCGCCGCCTGTGAAGAGTACGACTTGGGTCA---GTTTCCCCAGGAGCAGTCACTG--------CTTGCCTAGAGGGGCCCTGGGGAAGTGGGACACCATGTGGCATGCGGTGGTGGGGTGGGGGCAG----TGCGGAGACAAAACAGCC----TCTCTCCTCTTGAATAAAAGACACTTGAGTGATCCATTGGAGCTTGGTATGTCCCACCTATTAAGTACATCTAGGCTTTCTAGCTCACATTTATAATTAGCAAAGTAGGACTGGACATCAACCTTTCCTGTGGGCCTACAAGAGCTGAATTGGAGAGCGCTTTGGAAAGGAGACGCTAAGAAAATTCAATATGTGATGTTGCAGTTGGGCCACAGCTCAAATGGGAAACTACAACATGGCCTGTGTCCTAGGATGGAGAATTTCAAATATGTTGCTCCATAGGCTCACGACTTAATTAAAAAAAATTATTCACTATCAGTGCCATTCCTCTTTTCTGATGTTGTGGGGATGATGCATTTGTCTATCAG---CAACACAGAG------AAACATACCTCATGAAAGAATGGGAGTTTGGTGGGGAAGGAGGCACTTCTGTGTCATCCAGGTATTGCCTGCTCTGCCCATAAGCGTAGAACCGAGGAGAGAGCATGGGGTCGCTGTCTTCGTCCAGCAGCTGACGGATCAGGCGCCCAGCCTGCGGCGAGAGGTGGGCTTCATCAGAGTCACTGTTCTCCCGCTGCCAGGAGGAGAAAGCAGGGATAGGCTCTGGAAGATAAGGGCAGTAAGATCAGGA chr4 + 94230402 36260603 36260602 36261365 36260603 36260602 36261365 763 TGAGTAGAGACTCACTCTGTATTTCCTTTCCTCCTCGAATTTGTCCTCAAACTTCCTGATTTTTTTCTTCAGTCCCTGAATCCTCCGGGTAAGCTGTGCAGGGGTAAGGTCTTCTCTGTCATCTTCGTAAGATCCCAAAGAAGAACTCCGCCTCCTACCAAGAGCAGAGATTGCACAAAGAGTTTATCCA--AACAGCTGCAGTACATCTTCTCCCTCAGAAGGACACTT----------AAACTTTGTGTAA------------ATACAGGCAAATCCCACGGAAGTGAGAAAGTTATGTTGGTTACTCTCTAATGACAGACA---GAGGAA-------GAGGACAG-------CCTCTTTCAGGAACAGCAA--CTCTCTAGATATTAATTCTAA-----AACCCTGAAATGACCAGTTACC----------------AAGAACT--------------TTT------------CTTATAACACCTATTTCCTGAT-----AGTAAAAACAGAAGCCCAACACAATATAGCTATATGGCTTGTGT-----------GATCCAAAGGTATGTTGCTT-----------GATGCAATTGTGCAA-------CGCAGCCAG--------------------------------------------ATCAGAGTCACCACAGAGTGATCACAACCCACCTCATAAATGAATGAGAATTGGGAGGGGAAGGAGGCACTTCTGTATCATCCAGGTACTGTTGGCTCTGTCCATAGGCGTAGAAGCGAGGAGACAGCATAGGATCACTGTCCTCATCCAGGAGCTGGCGAATTAAACGACCAGCCTGTGGGGAAAGGCGGGCCTCTTCTGAATCTAAGCCATCTCGCTGCCATGAAGAAAGTGCAGGGATGGGCTCTAG-------GAACAGTAAGACAAAGA ....x:..x...:........:...:.:..:..:......:.:..:..........x...:..:..:..x..x.:.........:..x..:.....x.....x..x.....:...:xx.....x..:..:..:....:...:..:..:....x...::x.....:.x::x...x::x.---....x:...--.:...:::.x.--------..:x.::...:..:.x..x----------.x..:x....xx.------------:.:x:....:----::....::::.:.x..::----.xx:.x....:x...:.x.....---...x:.-------...xx::.-------.x:..x.:.:.x...x.x.--..:.....x.xx:.x..x...-----..xx:x.:.x..:x..x:x...----------------....:..--------------...------------..x.x..x.:::.x.x:x....-----...x:::x..x.:x:.x..::x:.x.:x:.x.:.....:.....-----------..x::xx.::.........:-----------..:x:....:x:x..-------.:.x::...--------------------------------------------.....---..x.......------x...x:.......:..x.....:..:..x..x....................:...........:..::x......:.....:........x........x.....:..:..:.....:..:.....x.....:..:..:.::..x........:..x..:...:....:..x..x..:..xxx.::x..:........x..:..:.:x........:......:.-------.::........:x.:.. 178M3I9M2D11M8I19M10D13M12D10M4I18M4I23M3D6M7D8M7D19M2D21M5D22M16D7M14D3M12D22M5D44M11D20M11D15M7D9M44D5M3I10M6I226M7D17M 501/735 68.2% 763/94230402 0.0% 203/735 27.6% 52489153 NA +23350 chr4 + 190214555 88758746 88758745 88759702 957 AACCCTACCTTCCCAGTTCTTTTCATCACACAATGCAGTCAGGTCCGACTGGGGCACTTCGGAGACAAAGCTCTCCTCCTGGTCACCGGCATCTTGATTTCTCTGCTGTTTGGTGTCAGATAGGCTGGGATGCTCCTGGATCTTCATTGTGGGGCTCTGC--------------------------------AATAACAGCACAATGTCCCCAAATATCTACTGCTCACCAAAACCCCAAGACGT-----CTGCAGCAATTCCACTCCTTCAGGATAAAACCTTCCAAGT-CACAGCTGCTAATGCATCCAGCACAGAAATAAAAATCATGGCTTG--ATGCCCCCCGGATCCTAGCTGGCCACTTGCAT-GCAGAAAGCAACTGTCCATCTGTGCTCCTTTAACTTTCCCC---------------------------AGGCTGCTCTTCCCGATAACTGCAGGCAGCTGACAGTCTTGGTGATTACTGATTGGGGCCAGGAATGAGGG---------------------------AAAGGAGTTTG--GTGTTTTCTTAAAGGAGTATGGCTCTCATGACTGTAAACAACAACAATGAAAACCGGGCTACTGCTGTTGCTAAGGCTGTAGTAGCAACATGGTGTCTTTC-----GCAGG---TGGACTTCTTTGCCCCTTAGGTAAACAGTCCTGCAAGCCAGGAATAGAGGCTGTGTACGTGAAAGCTCCCCTGCCGGCCCTGGCTGCTTAGATCAAT----------TAAGCGGGGCTAGCTGCACATTCCCAGATTTCCTGTGGTTGTTTTCTCACTGAGTATTGGGAGAACAG-ACTATTTATGGAGGAGCTCTGGGTATTAAAGCATTGTTGCGCAAATTCAAACAGCACAGGGGATTGGCGTCTCATCTCAGCTAGCAGTAAAGAATACGGACTCTGGAAATGAGCCAAAA---TTACACAGGGAGCAATTTTTTTTTTTAAGTAAAAA------------------------GTCAAGAGCTGGCAAGTCAGTGATGCATAATTCATGTCTTACAAATACGCAACTGTCACTTGTTTTCCTACTATTCATC chr4 + 94230402 36268348 36268347 36269396 36268348 36268347 36269396 1049 AATCCTACCTTCCCAGTTGTTGTCATCACACAGCGTTGTCAAATCCAGCCGAGGCACTTCTGACACAAAGCTGTTTTCCTGATCATCAGCATCTTGATTTCTTTGCAGCTTGTTTTCAGGAATGCTTGGGTGTTCTTGAATCTTCATACTTGAAGGCTGCTATATTCCCACAGAAATGAGAAAAAAAAAAAAAAAAAAAGCAAAATATTTC--AAGATGAAGAGGAGGGAAAAATCCCCTGCCGTCACAGCAGCAGTAAGCTCAGGCTTTTA-AATAAAAAGGTCAAAATAAAAAGAACCTGACGTTTCCAGTTCCAAATTCAAAGCCCT---TTGCAGTGACCCC---ATACGTACCAATCACTCACATCGATAAAAACATCTGTCTATTTGCCTTCCTTGAATTTTCCCTTCTTCAGAAAGCCACAGCAAGTTCCCGAGGCTGCCTGCCCTGACAACCGCATGCAGCTGAAAAAGCCTCTGCTGATTGATTGGGGTGAAAAGGGAGGGAGGACTGCAGGGAGGAAGGGAGAGGGAAGAGGAGGCTGCAGAGAGTTCCTACAGGAGTGCAGCCCCTTGG---------AACAGCAACAAAAAT---GCTACTGC-------AAGGCT---GAGGCAATATGCGGTCTCCTAAAAAGCAGGCACTGGA-------GCTCCTGTCGTAGCAGCTGCAGACAGCAAGCAGTGCAGGCTACGTACACAAATGGTCTCATGCAGGCTGTGCTGGCTCAGATCAATTAGTGCCAGCTAAGCTGTGCAGGCTGCACATTCCCTGATTTCCTGTGGTTGTTTTCTAGCTGGGCGTGGGGAGAGCAGAACTATTTATGGAGGAGCTCTGGGTATTAAAGCAGTGTTGCGCAAATCCAAACGGCAGTGGGGTTTGGCATTTCAGCT--------GGAAAGCAGTGCGGACTCTGAGAATGAGCCAAAAAATTCACACAAGCATCCA----ATGACTTAAGAaacaacaacaacaacaacaaAAAACAATGGCAGAATGCTGTCAAATAAATGATTCATAATTTA-ATGCTACCTAGAGGTAACTACTGTTTGTCTCACCACTACTCATC ..:...............x..x..........::.:x....::...::.:.:........x..x........x.::.....:...:.:..............:...x.:...x.x....:x.x...x..:..:..:..:........xx.x.::xx....--------------------------------..x..x....x...:.::.--..x..xx.xx.xxx:xx....:...xx.x...-----.x....:..x::..xx.:..:.-:......xxx..x..:.-x.x..xxx..:.:.:x.....:x.x:..x.x...::.x.---...--:..x....---..x.xx:.::::....::...-.xx:...:..x.....:..:..:x:.....x..:......:---------------------------.......::x:..:..:...:...x........x.:xx::xx..x.x.:.........:x.::.:x.....---------------------------.:.....x:..--.x.xx...:..x......:::..:.::xx.---------....:...::....:---........-------......---.x:....:...xx....:::-----.....---....-------..:...xxx...:xx:x.x.x.xx...x..x.:.:x.....::....:::..x.x..:.x...x...:x..x:x...:........----------.....x.x..x:.............x.....................x:...:.::.x......:...-.................................x............:.....:...xx....x.....:.:...x..--------:.x..:x.:.:.........::............---.:.....:.x.x.x.----x.xx:.....x..x..------------------------.:x:.:x....x...:.x.:....x.......:.-:.x:...xx.x.x.:....:::::....:.:x.:....:..... 160M32I19M2D32M5I22M1D17M1I39M3D3M2I8M3D21M1I41M27I71M27I11M2I30M9D15M3D8M7D6M3D20M5I5M3I4M7D86M10I68M1I77M8D34M3I15M4D16M24I34M1D44M 630/906 69.5% 1049/94230402 0.0% 194/906 21.4% 52490398 NA +5996 chr4 + 190214555 88764192 88764191 88764348 157 AGTCTTTTTTTTTAAAATTATGAATGTCTTGTTTGTTATCAAAGGTATGCTTCTAAGCTCTCTTAAGCAGTAGGCTTAGAAAGCATAAAGAATGTAAAAATATTTTGAAAGAACTTAACACTTCACTGACCTTGTAATTCTGACATAAAATGATCTC chr4 + 94230402 36272245 36272244 36272392 36272245 36272244 36272392 148 AGTCCTTTCCTC----ATTCTGAATAT-----TTGTTACAAAAGGTATGTTTTTAAGCTGCCGTAAGCAACAGGCATTTAAGGGACAAGGAACGCAAAACTACTCTGCAGGAATGTAACATTTTCTTGACCTTCTAATTCCTATATAATGCCATCTC ....:...::.:----...x.....:.-----......:x.........:..:......x:.x......::....x.xx..:.x.:..:...:.:....x..:.:..x.:...:x.....:..:x:.......x......:x.:....x::x..... 12M4D11M5D125M 105/148 70.9% 148/94230402 0.0% 9/148 6.1% 52491947 NA +3341 chr4 + 190214555 88769693 88769692 88769774 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 6M1D6M4D65M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 12736492 NA +10431 chr4 + 190214555 88781160 88781159 88781364 205 CTTACCACAAGACCGTCCTGATTGTCATGAAGCTCAGAAAGTTTAGTACTGGATTTCTGACGTTTAGGCTTGCTCCTTTCTCCAGCACAACCAAAAGTATTTTTGTGTACCTTTTCGACTTCCTGAGTATTCAAAATACAATCATCAAGGTGGTTGAACCCAGAAGGAGTATTTTCTTTGTTGATAAGTCCCCTTGAATTGAGAA chr4 + 94230402 36277996 36277995 36278200 36277996 36277995 36278200 205 CTTACCACAGGACTATCCTGGTTGTCATTAAGCTCTGAGAGTTTGGTGCTGGATTTCTGGCGTTTTGGTTTATTCCTTTCATTAAGATATCCAGAGCTGTTGTCTTGTAATTTTTCTACTTCTTGAGTAGTTAGAATACAGTCTTCCAGACTGCTGAAACCAGACGGAATGTTCTCCTTGTTGATGACTTCCCTAAAACAAAAAA .........:...::.....:.......x......x..:.....:..:...........:.....x..:..::.......x::.:x.:.x...:.:x.:..x.:x....x:.....x.....:......x.:.:......:..x..x..::x.:....x.....x...:.:..:..:........:.x.:....x:..:x:.:.. 205M 148/205 72.2% 205/94230402 0.0% 0/205 0.0% 52503164 NA +9520 chr4 + 190214555 88787751 88787750 88787963 213 ACTTGTCTCTCCCATGTCGAACTTCATCCTGCTCCTTGGACTGGCGGCGGCGCTGTCTGGCAGATGTGGCAGAAGATGCTGATAGTGTTCCAGATTCTGAGTCCTCTGAACTTTGACCTCCAGAGTTATTAACATCAAAAAGATGTTGTTCTACAGCTGATCGGATGGTTCTTTCTAAGAGTCTGGCAAAAAAGAATGCAGAGTCATTCAAGC chr4 + 94230402 36281026 36281025 36281238 36281026 36281025 36281238 213 ACATGTCTCTGTTTCTCCGGGCTTCCTCCTGCTCTTTGTGCTGTCGCCTCCTCTGCCTGGCAGACACATTAGAAGAGGCTGAAGATGTTCCCGATTCAGAGTCCTCTGAACTCTGGCCGCCTGAGCCATGAACATCAAAGAGATGCTGCTCCACGGCTGAGCGGATTGTCTTCTCTAAATACCTGTCAAGCCGAAAAATAAGGTCAATTGAGC ..x.......x::x:x:..::....x........:...x:...x..x.xx.x...:........::::x:......x.....x::......x.....x..............:..:..x..x...::..x.........:.....:..:..:..:.....x.....x..::.:.....:x::...x...:xx::..x::.::....x.::... 213M 146/213 68.5% 213/94230402 0.0% 0/213 0.0% 52506725 NA +4417 chr4 + 190214555 88804994 88804993 88805082 89 AAAAATCAAATAAATACCTCAAATAGAAAGGTGACAGAGGTCTTTCATCTTCCTGTGAACTAAAAGGAA------AATAAATTTTGAATTAATAT chr4 + 94230402 36291734 36291733 36291828 36291734 36291733 36291828 95 AACAATTGAGTAAATACCTCACATAGAAGGGTGACATAGGCCGCTCATCCTCTTGGGAGCTAAAAACAAACAAACAAAAATTTTTAAGTTAGTAT ..x...::.:...........x......:.......x...:.x:.....:..:..x..:......:x..------..x..x....:.:...:... 69M6I20M 68/89 76.4% 95/94230402 0.0% 6/89 6.7% 52513260 NA +3112 chr4 + 190214555 88808532 88808531 88808609 78 AATTTTTTCCTAAAGATGAAATTGAGAATTAATTCTGATTCACTTTTAATTTTTAAAAATAAGCACATGTTCTGTGAA chr4 + 94230402 75154086 75154085 75154158 75154086 75154085 75154158 73 AATTTCTTCTGAAATATGAAATGAAGAAATTCTTCTGATTCATTTTAAATGTTTAAGGA-----ATGTTTTCAGTGAA .....:...:x...x.......x:....x.xx..........:...x...x.....::.-----.::.x...x..... 59M5D14M 55/73 75.3% 73/94230402 0.0% 5/73 6.8% 13654446 NA +3573 chr4 + 190214555 88836820 88836819 88836903 84 CATGGTGGCGGGTGTTTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::....:.x::..--...:.:.......:...::........x.xx.x...x...........:.:..x.xx:..:..:... 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 12803623 NA +3227 chr4 + 190214555 88841354 88841353 88841436 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAACCGTTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::........x.xx.x...x.::........:.:..x:xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 12808157 NA +3021 chr4 + 190214555 88841485 88841484 88841550 66 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAATTGAAAAGACAACCCATAGAATATGAGAAAATATT chr4 + 94230402 82267703 82267702 82267768 82267703 82267702 82267768 66 CTCAATTTCAAAAACAAAAACAAAAAAAACCCCAAACAAATAATTTACAGAATAAGAGGAAGTATT ...x:.:.......x.....x........xx:::..x.:.:..:::.:......x...:..:.... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 6573782 NA +3222 chr4 + 190214555 88850417 88850416 88850499 83 CATGGTGGCACACACCTGTAGTCTTAGCTACTTGGGAGGCTGAGGCAGGATAATTGCTTGAATCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:::.........::........x.xx.xx..x::......:....:..x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 12817220 NA +3388 chr4 + 190214555 88856353 88856352 88856426 74 GTCCACCTGTAGTCCCAACTACTTGGGAAGCTGAGGTGGGAGAATGGCTTGAGTCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x...x......:...:.......::.:......x:xx.x...xx:.....::....:..x..x:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 12823149 NA +3002 chr4 + 190214555 88865848 88865847 88865895 48 ATTTCTTTCAACTTTTTCCTTTGTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 71185735 71185734 71185782 71185735 71185734 71185782 48 ATATTTCTCAACGTTATGCTTTGTCTTTATCTTTTTTTTTTTTTTTTT ..x.:.:.....x..x.x........:.x................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 17680113 NA +3217 chr4 + 190214555 88899058 88899057 88899133 76 GTGTGTGTGTGTGTCTGTGTGTATGTGTGTGTATGTATATATACACACACACATACATATATATATATACATACAT chr4 + 94230402 85834542 85834541 85834615 85834542 85834541 85834615 74 GTGTCTGTGTGTGTGTGTGTGTA--TTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ....x.........x........--.xx:....x.:...:...:::.x.:....::x...::.:.:.....:.... 23M2D51M 53/74 71.6% 74/94230402 0.0% 2/74 2.7% 3064516 NA +3768 chr4 + 190214555 88899063 88899062 88899137 75 TGTGTGTGTCTGTGTGTATGTGTGTGTATGTATATATACACACACACATACATATATATATATACATACATACGT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x...x.......:.....:.xx.....x::.....:.:::.x......:.x...::.:.......:..:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 3064522 NA +3259 chr4 + 190214555 88899065 88899064 88899139 75 TGTGTGTCTGTGTGTATGTGTGTGTATGTATATATACACACACACATACATATATATATATACATACATACGTAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .:.:.:.x........:...x....:.::xxx.x....:..xxx......:...:...........x..::.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 48961890 NA +3389 chr4 + 190214555 88899066 88899065 88899146 81 GTGTGTCTGTGTGTATGTGTGTGTATGTATATATACA--------CACACACATACATATATATATATACATACATACGTATATATATG chr4 + 94230402 79265519 79265518 79265606 79265519 79265518 79265606 88 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATG ......x......:.........xx........:.:.--------.....:..x......x.:.:.x:...-...:x:x......x... 37M8I26M1D17M 62/80 77.5% 88/94230402 0.0% 9/80 11.2% 9633547 NA +4209 chr4 + 190214555 88899067 88899066 88899141 75 TGTGTCTGTGTGTATGTGTGTGTATGTATATATACACACACACATACATATATATATATACATACATACGTATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .............:...........xx..:..x:..:...:.::..x...:..:.x...:..:......::.:.. 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 3064526 NA +3059 chr4 + 190214555 88906270 88906269 88906354 85 AAAGCAAGACTCTGTCTCAAAACAAACAAACAAACAAACAAAAACAACAAAAAACAAAGAACCATGCTAAAGATTTCACATGGTC chr4 + 94230402 89117837 89117836 89117921 89117837 89117836 89117921 85 AAAACCCAACTTTGCTTAAAAAACAACAGATAAACCAACAAAAACCACAACAGCCATAGTATCATACAAAACAGTTAAGATAATC ...:.xx:...:..::.x....xx....:.:....x.........x....x.:x..x..x.:...:.x...x.x..x.x..::.. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% -211567 -94018835 +3498 chr4 + 190214555 88912966 88912965 88913167 202 GCAAGACAGAAGAAAGAAGAAAGAAGAA-------GAAAGAAGG-----AAGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGTAGTAGAAGTAGTAGTAGAGAGAAGGAACAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAG--GAGGAGGAGGAAGA chr4 + 94230402 91771693 91771692 91771908 91771693 91771692 91771908 216 GCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGGTGCTGAAGATAAGTGAGA ....:.::......x:.x...::x:.:.-------..:....::-----.:...x..x....:x.....::..x..xxx:x..:x..:.:.x:...:x.::..xx...::x.:.x.x.::.x......:...xx........::.x:x:.:....:.::::..::.x:x.xxx:.:...x....::..x::.x...:.x.--..:..x:..x:... 28M7I9M5I151M2I14M 115/202 56.9% 216/94230402 0.0% 14/202 6.9% -2858727 -91371675 +3162 chr4 + 190214555 88913053 88913052 88913201 149 GTAGTAGAGAGAAGGAACAAGAGGAGGAGGAAG----AAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGG-AGGAAGAGGAAGAG chr4 + 94230402 35548683 35548682 35548833 35548683 35548682 35548833 151 GTGATAGAGAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCT---CCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAG ..::......:...::.x.x..xx.x..x....----x..x:x:...:.x.::..x..x..x.xxx...:.xxxx---.x:....x...........x...:.x::....:.....x....x.......:xxx.:..:.-.x.x....:..x.. 33M4I38M3D61M1I14M 94/146 64.4% 151/94230402 0.0% 8/146 5.5% 53364370 NA +6131 chr4 + 190214555 88913111 88913110 88913537 427 GGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGA---AGAGGAAGAAG----------------AGGAGGAGGAGGAAGAAGA---AGAGGAAGAAGTGGAGGAGGAAGAGG------------------AAGAGGAAGAAGAACAGG--AGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAG----------AAGAAGAGGAAGAAGAGGAGGAAGAAGAGAAG-----AGGAAGAAGAGGA---GGAGGAGGAGGAAGACAAAGAAGAAGAAGTAGTAGAAGTAGTAGTAGAGGGAAGAGGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGA chr4 + 94230402 9535376 9535375 9535843 9535376 9535375 9535843 468 GGCAGAGAACCTCGGACAGGAGT-----GAAGAGGAAGCTAATAAGTA-----CATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAATCTGGTTTGTCTTCATCAGAAAGTGGGGAATCAGGATCTAGTTCAAGTTCTGAAAGCAGAAGTGGCTCTGATTCAGACTCTGAATCAACATCTAGAACAGATCAGGATTACATTGATGGAGACCACGACTACAGCAAAGTTGTGCAATCCAAAAAACCCAAAAGAAAAATCAAAAGAAAATTCACCAGTGggaaaaggacctggcagagcagagggac----aggaaggaggggtaga-----tggggaaggtgggggagatggagcagagggggaagaggtggtagaggtggaagaggctgtggcagaggaagaagaggtggtggcaggggcggaagaagaggccgaggaggcagagga ..x....:.xxxx.:.......x-----..........xx:.x:..x.-----x.xx......x..:x.xx.:.......:.....x.............x.x:..:..:::..---.:.....:..x----------------..:.:.x..:.:.xx.:..---..xxx...xxx..:.:.x:....x..------------------.xx.:x.xxx.......:--....xx.x:xx..x.:...xx.x..xx.x::x:...----------x.:..:.xxx.:....::.:xx.:....:..x-----..x::...:....---..x:...x..:::...----.:....:..x:.....-----.:.x::...x::.:.:..x.:..x:....:......:.x:.x.....x...:....xx.x..x...:.....:....x:.x..x..:..x:.....:....xx.....:.x...... 23M5D20M5D61M3I11M16I19M3I26M18I18M2I36M10I32M5I13M3I16M4D16M5D117M 261/408 64.0% 468/94230402 0.0% 79/408 19.4% 79377735 NA +3250 chr4 + 190214555 88913136 88913135 88913285 150 GAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAA-GAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGG-AGGAAGAGGAAGAG chr4 + 94230402 35548685 35548684 35548833 35548685 35548684 35548833 149 GATAGAGAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCT---CCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAG ..x::...::.:::...x..xx.x..x....x:-.x..x.x:.......::..x..x..x.xxx...:.xxxx---.x:....x...........x...:.x::....:.....x....x.......:xxx.:..:.-.x.x....:..x.. 33M1I39M3D61M1I14M 94/147 63.9% 149/94230402 0.0% 5/147 3.4% 53364451 NA +5667 chr4 + 190214555 88913195 88913194 88913570 376 GGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGA---AGAGGAAGA------------------AGAGGAGGAGGAAGAAG----------AAGAAGAGGAAGAAGAGGAGGA---------------------------AGAAGAGAAGAGGAAGAAGAGGAGGAGGA-------------------------------------GGAGGAAGACAAAGAAGAAGA------AGTAGTAGAAGTA-GTAGTAGAGGGAAGAGGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGA chr4 + 94230402 9535376 9535375 9535843 9535376 9535375 9535843 468 GGCAGAGAACCTCGGACAGGAGT-----GAAGAGGAAGCTAATAAGTA-----CATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAATCTGGTTTGTCTTCATCAGAAAGTGGGGAATCAGGATCTAGTTCAAGTTCTGAAAGCAGAAGTGGCTCTGATTCAGACTCTGAATCAACATCTAGAACAGATCAGGATTACATTGATGGAGACCACGACTACAGCAAAGTTGTGCAATCCAAAAAACCCAAAAGAAAAATCAAAAGAAAATTCACCAGTGggaaaaggacctggcagagcagagggacaggaaggaggggtagatggggaaggtgggggagatggagcagagggggaagaggtggtagaggtggaagaggctgtggcagaggaagaagaggtggtggcaggggcggaagaagaggccgaggaggcagagga ..x....:.xxxx.:.......x-----..........xx:.x:..x.-----x.xx......x..:x.xx.:.......:.....x.............x.x:..:..:::..---.:.....:.------------------...:::x.:....xx..----------...xxxx.:...x...:.x..x---------------------------....x...xx....xx.x:xx..x.::..-------------------------------------::.:...:.xxx.:.....:.------...:.x.:...x.-x.:.:....x::..:.:x.:....::.:..x:..x.::....:x.:..::..x.::.x.....::.....:.x..x:..:.x........xx.x:.x:.....:..:..:.x:.x..x..::.x...:.......xx.......x...:.. 23M5D20M5D61M3I9M18I17M10I22M27I29M37I21M6I13M1I151M 235/366 64.2% 468/94230402 0.0% 112/366 30.6% 79377819 NA +5563 chr4 + 190214555 88913261 88913260 88913573 313 AGAAGTGGAGGAGGAAGAGGAAGAG-------GAAGAAGAACA------GGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAGAGG-------------AGGAAGAAGAGAA----------------------GAGGAAGAAGAGG--------------------------------------AGGA-------GGAGGAG------------------------------GAAGACAAAGAAGAAGAAGTAGTAGAAGTAGTAGTAGAGGGAAGAGG----------GAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGA------GGAGGAGGAGGAAGAAGAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGA chr4 + 94230402 9535393 9535392 9535843 9535393 9535392 9535843 451 AGGAGTGAAG-AGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAATCTGGTTTGTCTTCATCAGAAAGTGGGGAATCAGGATCTAGTTCAAGTTCTGAAAGCAGAAGTGGCTCTGATTCAGACTCTGAATCAACATCTAGAACAGATCAGGATTACATTGATGGAGACCACGACTACAGCAAAGTTGTGCAATCCAAAAAACCCAAAAGAAAAATCAAAAGAAAATTCACCAGTGggaaaaggacctggcagagcagagggacaggaaggaggggtagatggggaaggtgggggagatggagcagagggggaagaggtggtagaggtggaagaggctgtggcagaggaagaagaggtggtggcaggggcggaagaagaggccgaggaggcagagga ..:....:..-......xx:.x:..-------.....x..:..------.....:.....x............::.x:..:..::....xx.:.....:..xxx.-------------..:...x:.:...----------------------:.:.x.....x..--------------------------------------....-------.:x....------------------------------:..:..xx.:.....:..x:.:x....:xxx:.x:..x.....:...----------.x...:.::x....:.:..::.x...x.:...:.:x.:..:...x.:..x...:.:...:..:.x..x.....x:.....------..x:.....:.....:.x..x:.x..:..x......:....xx.....:.x...:.. 10M1D14M7I11M6I56M13I13M22I13M38I4M7I7M30I47M10I80M6I57M 214/312 68.6% 451/94230402 0.0% 140/312 44.9% 79377868 NA +4206 chr4 + 190214555 88913350 88913349 88913561 212 AGGAGGAAGAAGAGAAGAGGAA-GAAGAGGAGGAGGAGGAGGAAGACAAAGAAGAAGAAGTAGTAGAAGTAGTAGTAGAGGGAAG----------AGGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAGAAGAGGAG--GAAGAGGAGGAGGA chr4 + 94230402 91771688 91771687 91771908 91771688 91771687 91771908 221 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAA----CAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGGTGCTGAAGATAAGTGAGA ......x.:..x:.....:x..-.....x.:.:...x.xx.::...x..x.x.x.:...----:..x..x.::..x....:.x..----------.:x.:..:.:..:.x:::x:..:.x...x.:..:.x......:...xx.........:.x:x:.::..::..::....:.x:x:xxxx.:...x.....:.:x:..x.....x.--.....x:..x::.. 22M1I36M4D22M10I114M2I14M 127/208 61.1% 221/94230402 0.0% 17/208 8.2% -2858338 -91372064 +7532 chr4 + 190214555 88938078 88938077 88938247 170 AGTTGCTTACTTTTACTATGATAAGCCTAGCCAGGTTTTCACATCTCAGATG------ATCATTTTCTGTATACTCTACTTCAAACAGGGTATTGTAATTTTCTAGAATTTTAGCCATTATCTTGTTGCACAGGTCCTGTTCCTTCATGCCTTCAAGCCCAGGTGGCACACTAGAA chr4 + 94230402 36345465 36345464 36345640 36345465 36345464 36345640 176 AGATACTCACTTTAACCAGAATAATTCTTGCTAGCTCTTCACATACTGGCTTTTCTTCATCCTTCTTCAAACCTTCCAGTTCAAACAATGTATTGTAACTCTCCAGCATTTTAGTCATGATCTTGTTGCAGATCTCTTGTTCTTTTATGCCTTCAAATCCAGAGGGCACACTAAAA ..x.:..:.....x..:.x:....x:..x..:..x.:.......x:::.x.x------...x..:.:::x.:x:..:.x........:x.........:.:..:..x.......:...x...........x.xx..:.....:..:..........::....:x.........:.. 52M6I118M 121/170 71.2% 176/94230402 0.0% 6/170 3.5% 52592613 NA +3002 chr4 + 190214555 88942555 88942554 88942606 52 AGACTCCATCTCAAAAAATAAATAAATAAATAGAAATGTAAAAAAAAAAAAA chr4 + 94230402 73293887 73293886 73293938 73293887 73293886 73293938 52 AGATTCAAGTTCAATAAATAAATAAGTAAATAAAAATGCAAAACAGAACAAA ...:..x.x:....x..........:......:.....:....x.:..x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 15648668 NA +3228 chr4 + 190214555 88944763 88944762 88944845 83 CATGGTGGTGGGTGCCTATAGTCCCAGCTACTCGAGAGGCTGAGGCAGAACAACTGCTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--.:....:.........:..:........x.xx:xx..x::..............x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 12911566 NA +3647 chr4 + 190214555 88945882 88945881 88946026 145 ATGTATTCTATGTGTGTATATACACAGACTATATA---TATATAGTATA----TATTATATGCATAGTATATTTATACACACATAGT---------------ATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATGTA chr4 + 94230402 85834437 85834436 85834602 85834437 85834436 85834602 166 ATGTTTTCTATGCTACTGAATACACTGACTGTTGACTTTCTGTGATACAGCTTTATTA-ATACCTACCTTATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ....x.......:xxx.:x......x....:.xx.---.x.:.::..:.----.....-..:.x..x:x.....::xx:x.::....---------------..:.....x.................:.xx..:..x::...:....:..x...:..:.x....:. 35M3I11M4I5M1D28M15I65M 99/144 68.8% 166/94230402 0.0% 23/144 16.0% 3111445 NA +3314 chr4 + 190214555 88945960 88945959 88946026 67 GTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATGTA chr4 + 94230402 85834542 85834541 85834608 85834542 85834541 85834608 67 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..:...................:.xx:...:x::...:....:..x...:..:.x...::.:.::.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 3111418 NA +3612 chr4 + 190214555 88953326 88953325 88953397 72 GCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGGAGGAGAATCACTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........:.::........xxxx.x...x................x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 12920120 NA +3179 chr4 + 190214555 88953453 88953452 88953493 41 TCAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAA chr4 + 94230402 89310879 89310878 89310919 89310879 89310878 89310919 41 TCACATAAAAACAAACAAACAAAAACAACAACAACAAAAAA ...x.x.x................................. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% -357426 -93872976 +3131 chr4 + 190214555 88953457 88953456 88953505 49 AAACAAACAAACAAACAAAAACAACAACAACAAAAAACATAACATAAAC chr4 + 94230402 76741966 76741965 76742014 76741966 76741965 76742014 49 AAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACAAAC ...............x..x..................x::x.x.:.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 12211491 NA +3056 chr4 + 190214555 88979847 88979846 88979913 67 TGTAATCCTAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.........::........x.xx:x...x.:.........:.:..x.xx::.:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 12946636 NA +10876 chr4 + 190214555 88990966 88990965 88991172 207 AACTTACTGAAAGCAATTTGGCCCAAATACAGTGGCGAGATTGTGAACATTCATGCGATTCTGCACATGATGCTTGGCTACTTTTGTCAAGAACTGGCAAAGGTACTTGAGGAGGCAGTAGTGGGTGTCTGGCAGCTCTTTTATTAAGTCTCTTAAGCTACT---CTCCTGAACATCATTTCTGCCATCTGGAAAAAAAAAGAATAAAAA chr4 + 94230402 36350069 36350068 36350278 36350069 36350068 36350278 210 AACTTACTGAAAGCAGTTCGGTCCAAATACAGTGGCAAGATTGCAAAGGTTCATCCTGTTCTCTACATGATGTTCAGCAACCTTTATCAGGAACTGGCACAGATACTTCAACAGGCAGTAATGTGCATCAGGGAGTTCTTTAAGCAGTTCTTTCAAGTTTCTTTCCTTCTGCACTTCATTTCTACCATCTAGAAAACACAAGAGGAGAAA ...............:..:..:..............:......::..x:.....x.x:....x:........:.::..x..:...:...:.........x..:.....x.:x........:..x.::..x..x..:.....x.x:.:x...:.:...:.x..---..:...x..x........:......:.....x.x....:x.:... 162M3I45M 156/207 75.4% 210/94230402 0.0% 3/207 1.4% 52640897 NA +11369 chr4 + 190214555 89020454 89020453 89020749 296 ACTAACCCTGAAAGAGTTGAATGAATCGAGGCTGCAACGCTGAGGTGATCAGACTGTCAGGCAGCTCCCTCAGAAACAGCTTCAACAGACTGGCTGCTGAGCAGACATCACCGTCCTTCCCGAGCTCCACGGGCACTCCACTCTCGAACTTCAGTCGAAGTTGTTCCACCACCTTCACGTTACCATTCACCCTAAAAAGACCTTCTTGGGTAAGTCCTGGAAGAGCAAAGTAGGCACAGAAAATAAAT--------AGGTTTCTCACAGAC---ATGAAACGTAAAGAATGATAAC---AACACAAAGAA chr4 + 94230402 36357031 36357030 36357338 36357031 36357030 36357338 308 ACTTACCCTGGTAAAGCTGAATGAACTTGGAATGTAAGGCAGAGGTGATAATCCCATCTGGCAGCTCTCTCAGAAACAATTTCAAAAGACTGGCTGCTGAGTACACATCGCCATCTTTAACCAGTTCCACCTCTTCTCCACGTTCATATTGCAGACGTAGCTGTTCCACCGTTTTCATGCTTCCATTCACCCTGAAAAGACCTTCCTGGGTCATACCTGTAATTATATGTTA--CACATGAGGTTGATCCGAACTAAGACATCCCACTGATATGATGAAGCGAATAATACAATAACATTAATACAAAGGA ...x......:x.:..:........::x:.:x..:..x..x........x.xx.::..x........:..........::.....x...............:.x.....:..:..:..xx.x..:.....xxx:x......x:..:x.:.x...x..x..:.........:::....:.:.x...........:...........:.....x.xx....x..xx::.x:x..--....x:.::.x:..--------..::x..:...x..:---.....:..x.x.:x.::.....---..:......:. 232M2D14M8I15M3I22M3I11M 207/294 70.4% 308/94230402 0.0% 16/294 5.4% 52663423 NA +15374 chr4 + 190214555 89029451 89029450 89029946 496 TTAACTCACCATGCTGCGTCAAATATTCCACTATATTCCACACTACTGCTGGAATGCCATTCTCGGTGAGCCCCTGCCGTTCAAGTTCTTGGAGACTGACTCCAAATAACTTCTGATAGGTAAAATCCTTCTGTTCATTTAATGGCACTGCCACTATCTTTTTCATGTCTTCTTTCAGCCGAACCGCTGCTTTACTTTGCTTAAAGGAGCGTAAGAAAAAAGAGCAGTCAGTCATATTTACCACAGGAGGTTGCATGGTTACAACAGAAACACCTGAATTAAAA--------TGTGTTTGAAGATGAATAGTTGTGGTCTTATTTTTACTTCAACTCAAATCAAAATCTCTAACATCTCTCACATGTTGCTCAGATATAATGGTTAAAAGGACTGAAA---AGTAATGAAAAACCTAA---AGCCA----------CAAATGAAGTGTGCAGCTAAGAGAGGG---AGCAATACACTGCCGTATCTAAGATATATTACTACAGTAACCAAGGGGTGTGACCCA chr4 + 94230402 36360554 36360553 36361046 36360554 36360553 36361046 493 TCAGCTTACCATGCTGGGTCAGGTACTCAACTATATTCCACACAACTACTGGAATGCCATTCTTGCTCAGTCCCTGCTGCTGGAGCTCCAGAAGACTCACACCAAACACCTTTGGACGGGTTGCATCCTTCTGCTTATTCAGTGGAAGTGAGGCTATCTTTTTCATGTCCTCCTTCAATCTCACAGCTGGCTTGCTTTGCTTAAAGAGGCATAGGAAAAAGAAGCA-TTAATCACATTTGCTACAAAATGTTGCACAGTTACTACATGATGGTATCCATCAAAACTGGCTTTTATGCTCCAGAATAAGT--TTTTGGTCTTACTTCC-TTTTAACTGACAGGAAAATCCCT-----------------------GTAAAGTGGGGAAAA--ACAAAAACCTACTAAAGAAAAATCAACGGTAGCTAACAGGAAGAGCAAGAGTAGTCTGTAGTTAAGATAAGGGAAAAAGAAACACTTTTGTATGCAAG-TATGTTACTAGAAAAACAAGGAACTGGGACTCA .:.:..:.........x....::..:..x..............x...:...............:.x.x..:......:.:.x:..:..:x.:.....x..x.....:.x...:x..::...x:x.........:.:...:.:...x.x..xx:................:..:....::.xx..x....x:..:............::..:..:......::....-.:.:...:....:.:...::.x......::.....x...x:.xx::x.xx..:....--------.:..:.:x.::..:.:.--..x........:..::-:..:....x.x.xx......:..-----------------------:..x.:...xx....--..x:...---.x...x......:.x.x---...:.----------...:x.x...x..:..:.....x.:..---.:x:.x.....x::....x:...-...:......x.:x...x.:.::x..x...:.. 226M1D57M8I17M2D16M1D23M23D15M2D7M3I17M3I5M10I27M3I23M1D33M 327/466 70.2% 493/94230402 0.0% 57/466 12.2% 52668897 NA +3020 chr4 + 190214555 89035448 89035447 89035486 39 AAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGGAAGGAA chr4 + 94230402 2216136 2216135 2216174 2216136 2216135 2216174 39 AAAAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAA .....:.....:....::.....:............... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 86819312 NA +3179 chr4 + 190214555 89061581 89061580 89061653 73 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTGCATTTGCTTGGCAAATTTTCCTCCATTCCTTTATTTTGA chr4 + 94230402 10673868 10673867 10673940 10673868 10673867 10673940 73 TTGTTTTTTTTTTTTCTTTTTTTTTCCCCCCTTGCATTGATAAAAAAGGGTTTTCTTCACTCCCTCAATTTGA ..x............:.........::::.:.......x::xx::x.::x...:..:..:...:.:.x..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 78387713 NA +3953 chr4 + 190214555 89066442 89066441 89066522 81 CATGGTGGTGCATGCGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.:...:.:...........::........x.xx.x...xx:........::.:..x.xx:..:..:.. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 13033245 NA +3073 chr4 + 190214555 89080986 89080985 89081056 71 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTACAAGAAACTTGAAACTTTTTTTGTCT chr4 + 94230402 63802455 63802454 63802525 63802455 63802454 63802525 71 AGAAAGAAAAGAAGAAATTGGGGAAAAAAAATTAAATAAAAACTTTAGAAAAGTTCAAGCTCTTTTTGTCT .:...:....:..:...xx::::........xx...x..:....x:.::...x..x..:..:......... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 25278531 NA +3208 chr4 + 190214555 89082567 89082566 89082638 72 TTGCACGTGGCATAGTATTTTCTCTCTCTCTCTCTCTTCCTCTCGCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578248 26578247 26578319 26578248 26578247 26578319 72 TTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ....x.x.....xxx..x...................:::.:.:x:.x.xx..:...:...x...::..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 62504319 NA +3390 chr4 + 190214555 89115957 89115956 89116039 83 CATGGTGGCATGCGCCTGTAATGCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.x.........::::........x.xx:x...x.............:..x:xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 13082760 NA +3075 chr4 + 190214555 89150299 89150298 89150358 60 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x....:.:...........::........x.xx.x...x::........::.:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 13117094 NA +3268 chr4 + 190214555 89157299 89157298 89157380 82 TATATAATATATATTATATATTATATGTAATATATAATTATATATTATATAATAATATATATATTATATATTATATATTATA chr4 + 94230402 26320263 26320262 26320344 26320263 26320262 26320344 82 TATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ......x..:...........xx...:..xx.....x....xxxx...x.....:.....x.x.x:...xx.....:.x... 82M 60/82 73.2% 82/94230402 0.0% 0/82 0.0% 62837036 NA +3834 chr4 + 190214555 89157428 89157427 89157556 129 ATTATATATTATATATTAATTAATAGATATTAATTAATATATAATATATAATATATATAATATAATATATAATATATAATATATAATATATATTATATATAAAACA--AAATATATACATATCTGTAATAA chr4 + 94230402 46018809 46018808 46018939 46018809 46018808 46018939 131 ACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATAA .:.::....:..x:.x.:...x......xx..xx.::.....:x.:.:xx....:xxx.....:::.............x.x........:.x..:...x..x.:.--.:x::...::...xx.:.:.... 106M2I23M 83/129 64.3% 131/94230402 0.0% 2/129 1.6% 43138619 NA +3087 chr4 + 190214555 89218089 89218088 89218199 111 TCCAGTGCTGTTCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTCCAAAGCACTTAGACATAAAAAATAAGGTTGGAATAAATA-AAGTGTGTTTTATT chr4 + 94230402 83462041 83462040 83462135 83462041 83462040 83462135 95 TCTAGTGCTGGTTTGTTGTTTTTCTTTTTTTTTATTATTCATTTTTTCTTCTTACTT-------GTTTGGG----------AAGGTTAGAGGAGAGGTATGTGTGTTTTATT ..:.......x.::...x.....:.........x..x..:x......:..:...x:.-------::..:.:----------......:..:x.:.x:-.x............ 57M7D7M10D16M1I14M 69/94 73.4% 95/94230402 0.0% 18/94 19.1% 5756048 NA +25601 chr4 + 190214555 89247779 89247778 89250120 2342 TTCAATCTAACACAGAAGACGGGGCAGGACGGACGCAGCAGTTGGGGCGTCGGAAGTTCTGCAGCATGGACTGGAAAACACTGTGCTGCCTTCCTCTGAGCTTCTTATTTGAAGAAGTATCTGAGGAAATGGATCTCCGGGTCTGGCTATTTTGAGTTTTGATTAATTTCTCATGTTCCCTGATTTGTCTTTGCAAATGGTTCTGGATCGCGATTCCCAGGGACTCTGCGTCCAAGGATGCACCATACACTTCCCAGGTCATTCCCTGCTCATCCCACACGACGTCCCTGACACGCTTGGACTGTTTCAGCTGGAGCTTGGAGTCTGCGCC------AAGCTGCTTTTTCTTATCTCCTGGAGTGAGTCCTACCTGAGCAGCAG------CTGCTGTCACATTTAACTTTTGCTC-----------CTTGAGGAACTCGCTGACGCGG------CTGGGCCTGCGTGGGCTGGCTTTGACGGAGCGAGATGGGGTCTTCTTGCCAGAACCTGGGCTGGAGTCACCCATGGGATCAGATGGCAGGCTCAGGCTGGTGGCTGTCTTGGTCTGTCTGTTTTCTTCTAAGGTGCTCTCCTGGTTCTTCCTAATTG----------GGGAGGGTGTAGGATTAGCAGCTGATT--CTGTGCCT-CCACTTTCTTGGGATTTAGGATTGAGCAGTAGGGTTTTGGCATCCGAGGTATCAGTGCCAGTAGACTCTTTTTCTTTTACTAC---CTGAGGAGATGCAGGCTTCTTTTCCCTTGCATCTCCTTTATTAGTGGGATCCAAGCT-CCCAGAA--------TGATCAGCTTTGC--------TGATAGAGCCACAAGAGTCAGATAGTTTGCAATCTGGGTCTGTTTTGTGG--------CCGTTTGTCGTTTTCTCTGCAAAC-TCAGATGGCCTGGTTTCAAATTTCCCCAATCCATAACTTGTT--TCAGCTTGACTGCATGCACTGATAGAAATCTGGTCAATGGCGGTAGCTTTCAGGGAGCTAGAATTAGTACCTGCGAGCTTTTTAGCAGTTGACTCTTCCCTCACTGGAGTCAT---TCCTGCTAAC--CTCCCATCTTCTTTACACGTATGCTGGGCATTACTGGAGACCAA-----------------ATTGATTGATGAGGTTTTAAGGACCCCA------------CCTGGTAGGCTCGCAAGTTTATTTTCCCGTTGGAAAGCTGTAGACTCAGCTGCAGCTGCCTGAATGTGCACCTGTGGCATGATGCCAGGGCACTGGCTGGACTCCTGGGGGGCTAGCGTGCTGTCAGAGAGCTCCAGTGTGTGGCT------CCCACTGCTGTGGCAAATGACACGCAGCTGCTCTTGTTCAAAATGCTCAGGAGCACGGCTTTCCTTCAGAAATGCAGTGAGGATACTGGGGCTGGTGGAGACGGATCTGCTCTCGACACTCGCCACTGCCTGCACCTCCGCATCTTGCCAAGCCCTGCTGGGAACTTCCTTGATTTCACTTTCAGC---TTGGTTG----GTCATCGTACTGGCTTCTTTGAACCTTGACATCTGACGCTGTGCTGGCAGCGGCACCTTCTCTGG----ACCTGGGGGACATGCCGAAGGTTCGCTAGTGAGGGGGGTTGGTTGAGGTGTCACAGAAGTTGTGCCTTGGGGGCCCGAGGCAG--TGACAGAGGGCTGCT-TGTT--------CTCTGAACATCCAGATTCTCTAGTTAGAGGTTTACAGGACCTCATTTCAGAGTCACAGATGGCTCCCTGCCTTTCCCCTTCAGG------------TCCACCTACAGGAGAGGATGAGTGACTGACCACCCTGGCTGCTGTCACTGGAGTCTGCACTGTTCCCTGGATTG--------TTTCTGGAGAAGGAAACTCACAGGACACCTGATCTTTGCTGCTACTGAGGACGCCTCCCACAGGACAACTTGGTT-TCT------CAGGTTGCTCTCTATTTGAGGTTCTCTGTGATCTCATCAGGGAATCTTCAGGCATGGATGAGGTGATGGCATTGGGCTGATCACCTGGGATGGACTGGCAGGTGTGCTGATTGGCGGGCATTGTCAATGGTGTGTGTATAAGATCCCTTCCTGCTGCAGAACTCGGGGCTGATGCTGC--GGGCTGGCT-----GCTCCCTGGCAG----CTGGGGATTGCCGGGAGAGTTGAATGTGGCAGGTGCTTTCTGCACTTCATTGAACACACCAGGAGAAGACATATCTGGTTG--GGTGGTCTCATGCTCACAAACCTGCATCAGGGCTTCGGCAGCTGCCCTGGGGCTGAGGTCTGGTTCTGCAGGGGCACCTGAAAAGCCAT---TGGCATTCTTACACAGGA-GAGCT---GGTCGATGCCGAGGTGAGGCAGCCTGTGGCTCTCCTAGATCGTCTTCTTTTCCGGAAGCTGCAATCAGGGAAGTTTTAGCTGATCTCAGAGGGTCAGGTACAGTCCCCATGGAATTTCTC chr4 + 94230402 36402526 36402525 36404777 36402526 36402525 36404777 2252 TTCAGTCTAACACAGATGACGGAGCGGGTCGGACACAGCAATTGGGACGCCTAAAATTCTGCAGCATGGACTGGAATACGTTATGCTGCCTCCCTTTCAGTTTCTTATTTGAGGACGTATCTGAGGAAATGGATTTCCGGTTCTGACTGTTCTGAGCCTGGATCAGTTTCTCGTGCTCTCGTATCTGTCTCTGTAAGTGGTTCTGGATAGCGATTCCCAGGGACTCGGGATCGAGGGAAGCACCGTAGACCTCCCACGTCATGCCTTGCTCATCCCAGACAACATCCCTGATGTGCTTGGATTGCTTCACCTGCACTTTTGCCTCCATGGCCGGGGTGGGCTGCTTCTTGTTTTCCCCATGGTTTGGCAAGGCCTGAGCTGAAGAAGGACAAGTCGTGGCATGAATCTCGGGCCTAGTCTCCTTGGCCTGAAGGCCCTGCTGCTGGGGATCTGTCGAGGCTTCTGTGTGAGGGCT----------GACATG----------TCCGGAACTGCAGCCTGGCACAGCCATGGCTTCAACCTG------CAGCTTGCTGGCCTCCGCAGCCTGCCTTGCCTCTCCTTGGCCTCTGCTCTGCTGCTCCCCACCTGCCTCCCCTGTGTGAGCCTTTCTGCTGATGGGCTCACTGCTTGTGTTTACCACTCCCTGGGCATCCAGCAC----CATCACGTTTTC---------------------------CTCCTTCAGTTTTGCCGCAGATTGAGGAATCAC---CTCCACTTTTGTTGCA-CTCTGACATT-----GCTCAGAGCTGCCCAGGACTTCGTTCTGCTTGGTTTCACCCTGTGTGTGACAGAGCAA--------AGGTAACTGGCTGCTT---CCTGCCTCGTGGACAAGACACTGCACATTGTTCTCAGTTCCAGCAGCAGGAGCAGTGTTTTC---TTTGCC--AGCTGCAGGCTGTTGATGGGGGTGAATG-GTGAGCTGCTGGACA----------GGCACTGATTTTGGCAGGGCTG----CAGCATCCACTGGCAGTGCAGCA-TTGCCCTTACCACCACTGGCTGCATCTGTCCCTTCAGCAGCACCCACAGGCGTCCCTTGGGAGGTGGCAGCTGCTGAGGACAAGGGGAGGGTGGGCTTTGCATTGTCTGCTGAAGCTTCGGACACCACATGAGGTGAGACTCCAGGCAGCCCGGCAGGCTGGCTCT---------GGGCTGTAG---CAGCCACAGCCATACCAACGGTTGATTTCAGCACAATACCAGGAGAACACGGGGATTTCTGTTGTGAGGAGAAGCTGTCAACAAGTTTAGAT---TGGCTCAGTCCCCCACTGCCTTGGTAAATGATGTGCAGTTCTTCCTTATC------CTCGGGAGGAGGATTCCCTTTTAAGAAGGCAGCAAGGATGCTGGGGCTGGTGGAGGCCGATTTGCTCTCCACAGTAGCCACGGCCTGAACCTCGGCATCTCTCCATGTCCTGCTTGCTGCTTCC-TGAGTTAACATGCTGCACTCTGACTGAACTGTCATTGTACCCGTTTCTCTGAATTTGGAGAGATGG-GTTGGGCC--------CAAGTTCCCTGGCTCAACACCAGCATCATG-------------------------------------TACAGGATGTGTCCCCTCATGG-CAGAGCTGGGCTGGCAACTGGCTGCTCTGCTCTGTCTCGCTTTGATCAGCAGGATGCAGCTGCTCAGTGACTGCAGCCCTACTTTTTGCATCCACA----GCCTCCTGTGGGTCTCTCCCAGGATCAGTGGTCGTTTCCCTTGCTGGAGAGGCAGGCTGAGCACCGGCTTCTTCTGCTTTC--------CCGCCTTCTTCCCCTCTTTGCAGAAGACTTGCCTGAGAAGTAGG---ACAGGAC------TCATTACCCCCAACTGGGGTGCTTGGGGAAGAAC-ACTGGGTCATCTGGAGCACTGGCTGCTCCTCA------GCCCTCTGAGGCTTCATGGCAGAGTCCTCCACCTGCACCAGAGCATTCACCCTCATCTGGCCACCCTGCATGAACTGCTGGGAGCTCTGTGGGGCTGGCAT-------------CATGTCAGGCCCACACC--CTGCTGAGC---AGGCCACTGCCACGGGGGCTGGCTCTACCGCTGCCTGAGGGCCTTCTGCAGCCTGGCTGGAGAGCCCAGAAAGAAGGCTGTCATCCTCAAGCC-------------------------TCTGGGTGTTGGTGTGCTTCAGGTCACAGG--TGCAAGAG----------GCTGC---AGAACCAAG----AGTTGTGCAGGGG--------AAGCCATTGCTGGCCTTCTC-TGCAGTATGAGCCTTAGGCTGGTGCTTA------GCAGGTGGCAGGTCTCCCAGGTGGTCCTTATCCTCAGGAGCAGTGACCAAGGAGAGCTTGGCAGGTCCCAGGGGATGTGGTACAGTCCCCATGGACTGCCTC ....:...........x.....:..:..x.....:.....:.....:..:.x:..:....................x..::.:........:...:.x..:...........:..x..................:.....x....:..:..:....::.x...:.:......:..:..:.xx..:.....:..:..:...........x.................x.x:..x.:...x.....:..x..:.....x.....x..:...........x..:..:.......:::.......:..:....x...x.x:..x.xx..:::.x.------::.......:..x..x..:..xx.:x.x:.:xxx:.......x.x..------xx.::..x:...xx.x..:xx..::-----------.:...:.:x.::....x:.x..------.x:...:.x:...x.xx....----------..x...----------x..:....:xx:..:x.:xx..x......xx...:x:x.------...x:..x....:x:.x::.:...:..xx::...:..x:.x:x..x::...x.x..:..:.x:..----------.x...xx.x.xx.x.x.xx:...x.:.--:....::.-.....::..x..x..::..x.:----..x:.x.x...:---------------------------...:..:xx....:.::.---:......:x::.---..:.x:..::x.....-...:xx:...-----.x..x:....-.....:.--------..x.::.:..::.--------...:.....x.--------..:..::.x..x:::.---:...::.:....--------.:.:x::.:...:..xx.x.x.:.-x...:x.xxx..x....---...x..--.x.:::.:x:....--.x:.xx...x..-:..x:...x.:..x.----------...:x.:::...x:x:.:...:----:..:.:.::.x:..xx.x:....-...x.::.x..x:......xxx...---...:x::.:.--.x....:xxx.x.:x.x:.x:x.x...xx::.:...::...x.:-----------------....x:..x...:.:..::::x...x..------------..x..:..x.:x...:.:.x::.:.---------::.......---....::....:::x:x..:.xx::x:.x::...::..:.....:x.x::xxx...:.:...xx.x.xx::x:x.......:x:..:.:x::.---.....------........:x...:......:::....:.x:..:.xx..------...:....x.x.::.::.:..:.::..x....::.....:...............:.x...:.......x...x.x.....x.....x.....x......:x...x.:......x.xx:.....-...x..x..x.x.x..---:..::..----.....:....:x.:....:....::.x..x.xx..:-.:..x..:--------..xx...:....----..x:x:.x:x....-------------------------------------:....:.xx...x..:.x:x..-.x...x::.--..:..:xx.......-..:.--------..:...x..x.x:...x.xx:x.:.x::x.x:.:...xx.:x.x...::x.x:....----..::....:xxx..:.:::....------------.:.x.:.:.x.......xx.:x...x::x.x:.:::xx.....x..--------.:..x:.x.....:xxx...--------..x.:x......x.::---.......------..x..:.:x.:.x:x:..::..:.xxx:x..:..-...x...:-...------.x..:.....:::.------.::.....x.:::....x:x:..:..:..x:x.xxx:x::::.::x.x:.x:.x:x...::....:x.x...:....x::..x.:x...xxx...x.....-------------::.:.x..::..x:x..--....x..:.---:...::x...::.--.........-----...x....:x:.----...x:.x:..x.x......::x.:x:x.:x:.x..::x..:x..xx:.-------------------------.....x..--....xx..:xx.x.....::--....xx..----------.....---:.::.::..----:...x........--------.......---....x....:-::...x.-....:---..::.:...:x.------....x:x.::.x.....:..:.x...:.:x.:::.:.:...x.::.:..:...::x:..:..x.:..:...:..:.xx.................x.x:... 331M6I47M6I25M11I22M6I21M10D6M10D39M6D65M10I27M2I8M1I22M4D12M27D18M3I12M3D16M1D10M5D10M1I7M8I13M8I11M8D16M3D12M8I24M1I17M3D6M2D14M2I12M1D15M10D22M4D23M1D25M3I10M2I44M17I28M12I25M9D9M3D92M3D5M6I39M6D124M1D16M3I7M4I36M1D8M8D12M4I14M37D22M1D9M2I15M1I4M8I57M4D23M12I46M8D20M8I16M3D7M6D34M1D8M1I3M6I14M6D101M13D17M2D9M3D13M2I9M5I12M4I48M25D8M2I20M2D8M10D5M3D9M4D13M8D7M3I10M1D7M1I5M3I12M6D102M 1298/2070 62.7% 2252/94230402 0.0% 454/2070 21.9% 52845253 NA +3371 chr4 + 190214555 89356338 89356337 89356620 283 ATTACTATCTGAAAAGGGAAGCCCCTATTTTGTTTTTCTTCAACATTTTCTATTTTCCTTGTCCTTTATTCTCCTATATACATTTTAGAATTGACTTGATGGTCTAAAATTGACCACAGCAGTTGGAGCCATTAAAACTATAGACCTAGGGTATTTTTGGAAGAATAGGACATTTTAATATATATGTTCTTATTTTTCTTCTTTCTTTCTTTTTTCTTTTTTCTTTCTTTCTTTTCTTTCTTTC---TTTTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCT chr4 + 94230402 83326783 83326782 83327028 83326783 83326782 83327028 246 ACTGCCATTGGGAAATGGAAATTTCCATCAAGTTT-----CAGCATTTCAG-----CAGTGCTGTTGAGTTTTACATTTACATT--AGATTTGACTT-----TTTATTTTTAACCA---------AAAGCAT--ACACTATAGTTTACTGCTTTTTTTGGGTGTAGAGTACA-----ACCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCT-------CTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT .:.:.:..:x.:...x....::::.:..:xx....-----..:.....:xx-----.xx..::x..x.x.:.:x:..x......--...x.......-----.:..xxx..:....---------:.:x...--.x.......x::xxx.x.x.......:x.x.x..x...-----.:x:.:..x:::.....:x:.x.....x.:.:.:.xx:.:::.........-------.....x...---.:.x.....x.x..:....x.....::..:..:...... 35M5D11M5D28M2D11M5D14M9D7M2D38M5D51M7D9M3I39M 156/243 64.2% 246/94230402 0.0% 43/243 17.7% 6029555 NA +3932 chr4 + 190214555 89356527 89356526 89356668 142 TTATTTTTCTTCTTTCTTTCTTTTTTCTTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTCTTTCTTT---------CTTCTTTCTTTCTTTCCTTCTTTCTCTCTCTCTC-------------------CCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCTCTCTTT chr4 + 94230402 72471342 72471341 72471511 72471342 72471341 72471511 170 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTCCCTTTCTGACTCCTT ........::....x.xxx:...:....xxx..::..x...x.:...:.:....:.:........:...---------.x.....:.x..x..x.x.x...:.x.x::.x.:-------------------:.:..:::.......:x..........::..xx...:.. 69M9I34M19I39M 95/142 66.9% 170/94230402 0.0% 28/142 19.7% 16885185 NA +3509 chr4 + 190214555 89356544 89356543 89356633 90 TTCTTTTTTCTTTTTTCT--------TTCTTTCTTTTCTTTCTTTCTTTTTTC--TTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTCTCTCTCTCCCTC chr4 + 94230402 49829809 49829808 49829908 49829809 49829808 49829908 100 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC ..::.:.:.xx.......--------...:x.:..:.x.xx...x:....x:.--..........:...::............:..:.:.:.:....... 18M8I27M2I45M 65/90 72.2% 100/94230402 0.0% 10/90 11.1% 39526735 NA +3082 chr4 + 190214555 89356550 89356549 89356629 80 TTTCTTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTCTCTCTCTC chr4 + 94230402 86491064 86491063 86491143 86491064 86491063 86491143 80 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTC ...:......:...:....xxxx:.::.:.:..x:x..:.:........:...:..:.:::..::..:.x.:.:..:... 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% 2865486 NA +3074 chr4 + 190214555 89356585 89356584 89356689 105 TTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTCTCTCTCTCCCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCTCTCTTTCTTTCTTTCTCTCCCTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .:.x.:..:.::.....:..x.:...:.:.x.:x:.....x.x.:::::x..xx...:x..xx:x:....::x...:.....x:.x......x.:..:....... 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 56460987 NA +3255 chr4 + 190214555 89356674 89356673 89356736 63 TTTCTCTCCCTCTTTCTCTCTCTTCTTTCTTTCCTTTCTTTCTTCCATCTCCCTCTCCCTCTC chr4 + 94230402 22331050 22331049 22331112 22331050 22331049 22331112 63 TTTTTTTCCCTCTTTTTCTATTTTCTTTCTTTTTCATCTCCTCGCCATCTCTCCCTCCATGTC ...:.:.........:...x.:..........:::x...::::x.......:.:....x.x.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 67025624 NA +4001 chr4 + 190214555 89356697 89356696 89356810 114 TCTTTCTTTCCTTTCTTTCTTCCATCTCCCTCTCCCTCTCTCCCTCTCTCTCCCTATCCCATCTTCCTCTCCCTCTCCGTCTCCCCTGTCTCTCTCCCTTTCCTTCCAATCCCT chr4 + 94230402 39651643 39651642 39651755 39651643 39651642 39651755 113 TTTTGCTCTCACTTCACTGCCCCTTC-ACCTCTGCTTCACCCCCCAGCTGTCCCTATCTTCCTCTCCTCCCCTTTTCTGTTTTCCATAGATTTCTCCTTTTTCTTCTAATCCCT .:..x..:..x:...x:.x::..x..-x.....x.:..x.:...:xx..x........::x:::.....:..:.:..:..:.:..x.:xx.:.....:...:....:....... 26M1D87M 73/113 64.6% 113/94230402 0.0% 1/113 0.9% 49705054 NA +3079 chr4 + 190214555 89374328 89374327 89374388 61 GTGCACCTGCGGTCCCAGCTACTTGGGATGCTGAGGTGGGAGGATCACTTGAGCTCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x..::..:...........::.x......x:xx.x.:.x.......:.:...:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 13341124 NA +3324 chr4 + 190214555 89380799 89380798 89381025 227 TGGACTGGAAGACTCCCTCTGTCCTTTCATATCGATGGCCTGCTTGCTCGCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---------TCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792620 85792619 85792852 85792620 85792619 85792852 233 TGGAGTTGGAAATGCTGTTTCTCTTTTTCTTTAAATGTCTT---TTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ....x.x.:.:.:x.:x.:.x..:...:x.x.x:...x.:.---.x..::x:....x:x.:x.:..x..::x....xxx..x.:.:....:..::.::xxx...x..:.::x..x..x---------.:..x:.:::.......x:..:....:.x.x:x.x......x.x:.....::.:xxx.::x.:.:...x:::.x.:.:x..xx.:......:...:.:.:....:.::. 41M3D74M9I109M 123/224 54.9% 233/94230402 0.0% 12/224 5.4% 3588179 NA +4032 chr4 + 190214555 89380835 89380834 89380955 121 GGCCTGCTTGCTCGCCTTTCT--TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTC--TCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTT chr4 + 94230402 63697115 63697114 63697239 63697115 63697114 63697239 125 GACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:.:.xx..x...x......:--.x:.........:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.--..........:.::::.:.........:..:..x... 21M2I63M2I37M 81/121 66.9% 125/94230402 0.0% 4/121 3.3% 25683720 NA +3929 chr4 + 190214555 89380850 89380849 89380974 125 CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC-TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x..:.:..x.xx......-...::.:.:...........:..:...x.:. 13M1D79M1D31M 81/123 65.9% 123/94230402 0.0% 2/123 1.6% 25683733 NA +3528 chr4 + 190214555 89380851 89380850 89380959 109 TTTCTTTCTTTCTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:..:..:..::.x---..:.:.....:....:.:x..::.:.x....xx.....x.:.------:..x....:..x.xx...:......:.::::......::...:.....x:.. 15M3I42M6I52M 72/109 66.1% 118/94230402 0.0% 9/109 8.3% 25683729 NA +3124 chr4 + 190214555 89380894 89380893 89380988 95 TTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x...:...xx.:.:..:...:........x.::xx..:.x..::.x:x...:...x...:.::..::.:...... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 6053960 NA +3088 chr4 + 190214555 89380901 89380900 89381063 163 TTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTCCTTCCTTCCTTCTTTC chr4 + 94230402 8009574 8009573 8009736 8009574 8009573 8009736 163 TTATTCTCTTTTTTTTTCTCTTTCTTAACCTATTGTAACCCCTTTTTCTGTTATTCCCTTCATTACCTCCTTCATTGTATTCTTCAGTTAAACCCTTTCTACTATAAGAGTTTCTCATTTCTCATCCTTTATTCCTTCCATGCTCTTATTATTCCAGTCTTTC ..x:.:.....:...:.........:xx:..x.:x:xx:::...:..::x..x..:.:...x..x:..:::..x:.x.x..::.:xx..xxx::......x.:x.xxxxx:...::x::.::.x.....:x........x.x....:x..x:.:.xx...... 163M 90/163 55.2% 163/94230402 0.0% 0/163 0.0% 81371327 NA +3462 chr4 + 190214555 89380901 89380900 89381003 103 TTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCC chr4 + 94230402 30531212 30531211 30531314 30531212 30531211 30531314 103 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTCCACC .:.x.....:.........:x.xx.:....x::.:x.:...:.x.:x.xxx....x..x::x..x.:x.:.:....x.....:..:...:.........:x.. 103M 66/103 64.1% 103/94230402 0.0% 0/103 0.0% 58849689 NA +3076 chr4 + 190214555 89380917 89380916 89381019 103 TCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCC chr4 + 94230402 30531212 30531211 30531314 30531212 30531211 30531314 103 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTCCACC ...x.........:.....:x:xx.:.:::x..::x....:..x.:x.xxx...:x..x:.x:.x.:x.:.::...x.....:..........:...:.:x.. 103M 63/103 61.2% 103/94230402 0.0% 0/103 0.0% 58849705 NA +3017 chr4 + 190214555 89401394 89401393 89401432 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 64608768 NA +11988 chr4 + 190214555 89427884 89427883 89428137 254 TGGCTCTATCTTTGTTTCCGTCATACCATGTTTGTGGTGATGTCATACTCCAATTTTAAAGATAAT-TTTATTTATCACACCGGAATTGGCCAATGCCTGGAAAGGTTACATCTGTAAAGTAAACATAAAACACTGTGGAGCCAAGTGGAGCCCAAATGATCTGTTTACATTTAAGATTGATTTTTTAAAACCTCATTTCCTTGTTTTGTTACAGATGGCAGTGGAAAAAACAATAGAATTTCTGAATGAAAAAA chr4 + 94230402 36459696 36459695 36459943 36459696 36459695 36459943 248 TGCCTGTGTTTTCAAATCTGTTACA-----TATGCAGTGATGTAAGACTCCTATTTTAAAGGCAATATTTATTTATCACACCAGAAGCGGCCAATGTCTAGAAAGGTTATATCAGTAAAGTAAACATGAAGCACTACTGAACAAAGTAGAACCTAAATAGTCTGTTTACATTCAGCATTGAGTTTTT--AATCTCATTTCCCCATTTTGTTACAAACCATAAAGGAAAAACCAATACAGAATCCATAGGAAAAAA ..x..x.:.:..::xx..:..:.:.-----.x..::.......x.x.....x.........::...-...............:...x:........:..:.........:...x.............:..:....::x..:.x....:..:..:....::............:.:x.....x.....--..:.........:::..........:.:x::.:x.......x.....x.:xx..::x.x....... 25M5D36M1I120M2D66M 185/247 74.9% 248/94230402 0.0% 8/247 3.2% 52968188 NA +3277 chr4 + 190214555 89455994 89455993 89456041 48 TCCGTCTCCCAAAAAAAAAAAAAAAAAAAAAAAGAGAACTGCAATGAA chr4 + 94230402 39595094 39595093 39595141 39595094 39595093 39595141 48 TCTGCCTCCCAAAAGTGAAAAAGGAAAAAAAAAGAAGACTGCAATGAA ..:.:.........:x:.....::...........::........... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 49860900 NA +3169 chr4 + 190214555 89462066 89462065 89462125 60 CAAAAAAAAAAAAAAAAGAGAGAGAGAGAGACAAAAATCTAGTCCATGGATCCATTTCTA chr4 + 94230402 44112715 44112714 44112774 44112715 44112714 44112774 60 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTTCCA .................:.............xx..x.:x:....:xx.:.xx......:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 45349351 NA +3281 chr4 + 190214555 89462066 89462065 89462108 43 CAAAAAAAAAAAAAAAAGAGAGAGAGAGAGACAAAAATCTAGT chr4 + 94230402 75300455 75300454 75300497 75300455 75300454 75300497 43 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGT .................:.............x.:....::... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 14161611 NA +3523 chr4 + 190214555 89465346 89465345 89465416 71 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGATGCAGAGGCTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x......:.........::::........x.xx.x...x.............:.xx:xx:.....:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 13432140 NA +3178 chr4 + 190214555 89530910 89530909 89530982 73 TGTGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGGACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x..:...:...........::........x.xx.x...x::....:...::.:..x.xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 13497705 NA +3214 chr4 + 190214555 89556237 89556236 89556310 74 GTGCACCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAAGAGAATCGCGTGAACCGAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::.:......x.xx.x...x.:.x......x..:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 13523033 NA +3244 chr4 + 190214555 89556375 89556374 89556418 44 AAAAAAAAAAAAAACGGAGAGAGAGAGAAATCTCTAGGTTAAAG chr4 + 94230402 86892843 86892842 86892886 86892843 86892842 86892886 44 AACAAAAAAAAAAAAAGAGAGAGAGAGAAATCTCCAGGGTAAAG ..x...........x:..................:...x..... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 2663532 NA +3548 chr4 + 190214555 89581120 89581119 89581192 73 TGTGCTTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGAAGTATTACTTGAACCCAGGAGTTTGAGTCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:.........::.:........x.xx:x.x.x:............:..:..x:.x...:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 13547915 NA +3362 chr4 + 190214555 89639531 89639530 89639595 65 AGGAAAGAAGGGAGGAAGGTAGGAAGGGAAAGAGGAAAGGAGGAAGGGAGAGAGGGAGAGAGGGA chr4 + 94230402 76841607 76841606 76841671 76841607 76841606 76841671 65 AGAGAATACATGAGGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGA ..::..x.x:x.......:..:.........:.:..:::...:...:.......:xx..:..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 12797924 NA +3302 chr4 + 190214555 89639810 89639809 89639940 131 GTATATATATATGTGTATATACACATATTAAAAAAATACATATATACGTATATATATATGTATATATATGTGTGTGTATATATACGTATATATATACATATATATACACACACATATATATACGTATATAT chr4 + 94230402 91734574 91734573 91734697 91734574 91734573 91734697 124 GCATATAGATATGTTTTCTTA-------TGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x......x.x:x..-------.:.x.:x...:.x....::x.x:x...:x.xx.....x....::.:.....xx...x:x.x:.x..:.x.x...:.....x.x.......:..:x........ 21M7D103M 81/124 65.3% 124/94230402 0.0% 7/124 5.6% -2094764 -92135638 +3106 chr4 + 190214555 89639889 89639888 89639999 111 ATATACGTATATATATACATATATATACACACACATATATATACGTATATATACACACATA--TATACGTATATATACACAC----ATATATACGTATATATACACACATATATACG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x.:.x....:..:.:::.x.x.:.:x:.::.:x.....:...x:.:......x.:::..--.........:..:x..::.----:.:....:..:...:x.:.::...::.:... 61M2I19M4I31M 68/111 61.3% 117/94230402 0.0% 6/111 5.4% 68530702 NA +3260 chr4 + 190214555 89640093 89640092 89640148 56 ATACACACATATATACGTATATATACACACATATATACGTATATATATATATACAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x......:.:.:..:.:x.:.......x................:...x..x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 15114019 NA +3107 chr4 + 190214555 89640098 89640097 89640156 59 CACATATATACGTATATATACACACATATATACGTATATATATATATACATATATATAT chr4 + 94230402 28997789 28997788 28997847 28997789 28997788 28997847 59 CACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATATAAAT ......:....x.x....:...:....:...xx..xx....:...:..:.......x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 60642309 NA +3099 chr4 + 190214555 89645392 89645391 89645434 43 AAAAAAAAAAAAAAAATCCAAAACCAAACCAAAAACAAATAAA chr4 + 94230402 34176498 34176497 34176540 34176498 34176497 34176540 43 AAAAAAAAAAAAAAAACCCAAAACCAAAAAAGAAACACATAAA ................:...........xx.:.....x..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 55468894 NA +3070 chr4 + 190214555 89645419 89645418 89645468 50 ACCAAAAACAAATAAACAAACAAAAAAACCCAGAAGCTTTTATGTACTAT chr4 + 94230402 53195378 53195377 53195427 53195378 53195377 53195427 50 ACTAAAAACAAGCAAACAAACAAAAAAACCCAACAAATCTTATGGACAAT ..:........::...................:x.:x.:.....x..x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 36450041 NA +3349 chr4 + 190214555 89652002 89652001 89652090 89 CGCCTGTAATCCAAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTAAACCCAGGAGGCAGAGGTTGCAGTGGGCCAAGATGGTGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:.x....:.:.x.........::........x.xx.x...x.:...:.......:..x:xx:..:..:..------..x...:..... 71M6D12M 59/83 71.1% 83/94230402 0.0% 6/83 7.2% 13618795 NA +3310 chr4 + 190214555 89654513 89654512 89654576 64 AAGTTGATTTCTTTATTTCTCTCTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCATTTCCA chr4 + 94230402 66351247 66351246 66351310 66351247 66351246 66351310 64 AAATCAATTCCCTGATCTCTCTCTCTTCCTTTCTTTTCCTGTTGTACCCTTCCTTCCATGTCCA ..:.::...:.:.x..:..........:........:::.x..x.x.:...:...:...x.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 23303266 NA +3573 chr4 + 190214555 89667120 89667119 89667202 83 CACAGAGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1494983 1494982 1495055 1494983 1494982 1495055 73 CACATGGAGATTC----------AGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ....x:....:..----------.:::...x.:.........x.:...............:.:..:...:.....x....::. 13M10D60M 56/73 76.7% 73/94230402 0.0% 10/73 13.7% 88172137 NA +3068 chr4 + 190214555 89667143 89667142 89667198 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 88172143 NA +3121 chr4 + 190214555 89667145 89667144 89667198 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -362931 -93867471 +3282 chr4 + 190214555 89667145 89667144 89667200 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 88172145 NA +3114 chr4 + 190214555 89667147 89667146 89667206 60 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATG chr4 + 94230402 51472490 51472489 51472549 51472490 51472489 51472549 60 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATG ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 38194657 NA +3282 chr4 + 190214555 89667149 89667148 89667204 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 88172149 NA +3174 chr4 + 190214555 89667152 89667151 89667205 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 4118732 NA +3305 chr4 + 190214555 89678082 89678081 89678162 81 AGTGTGTGTGTGTGTGTGTATGTGTGTGTGTTTATATATATATACACACACACATATACATATATATATATATAACTTATA chr4 + 94230402 79265518 79265517 79265598 79265518 79265517 79265598 81 AGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTA ..............::...:....xx...:.x..:...:.::.:::.....:..x.:.:..x.:.:.x:.:.xx..:.x.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 10412564 NA +3376 chr4 + 190214555 89678084 89678083 89678171 88 TGTGTGTGTGTGTGTGTATGTGTGTGTGTTTATATATATATACACACACACATATACATATATATATATATAACTTATAAGGAATTTT chr4 + 94230402 85834547 85834546 85834630 85834547 85834546 85834630 84 TGTGTGTGTGTGTGTGTATTAATGTAGG--CATACATATGTAAATACATGTTTATGCACACATACACACATGGCC--TGGGGAATTTT ...................xx:...:x.--:...:....:..x.:...:::x...:..:.:...:.:.:..::.:--.::........ 28M2D45M2D11M 59/84 70.2% 84/94230402 0.0% 4/84 4.8% 3843537 NA +3445 chr4 + 190214555 89678085 89678084 89678157 73 GTGTGTGTGTGTGTGTATGTGTGTGTGTTTATATATATATACACACACACATATACATATATATATATATAAC chr4 + 94230402 79265519 79265518 79265591 79265519 79265518 79265591 73 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAAC .............::.:......xx...x....:...:.::::::.....::.x......x.:.:.x:.:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 10412566 NA +3379 chr4 + 190214555 89678087 89678086 89678152 66 GTGTGTGTGTGTGTATGTGTGTGTGTTTATATATATATACACACACACATATACATATATATATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............:.........xx.x......:...:..:::::....:::.x.:....x.:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 10412568 NA +7974 chr4 + 190214555 89721031 89721030 89721298 268 ATATTTGTTTGGATTCAGCTTTACTGGAACACAGCTTAGCTTTGACATTTACAG-ACATGGGTTAGGTTTCATTTTGTTGCAAGATAAAAGGCAATCTGATATTTAGTTTACCTGCAAAAGGCAGTTAGGAAGCCCTAGAGGAACCTAATTAAAATGCAGCACATTTCCAAGGCACCATATCTTGCTGTGTTGCCATAGAAACAACGAGGATTTCTGGTCACTGACCTTCCAGGGAATCTGAGGATGTATTTTCATAAGGTTCATAAGA chr4 + 94230402 36526059 36526058 36526313 36526059 36526058 36526313 255 ATAGCTATTTAG-CTCAGCTTTAGCATCATACA---TAATTCTGACATTTGCAATCCACACGTCACCATTCATTTCACTGCAGGAAATAAGACAAAAAGGCATTTATTCTACCTGGAAAGGATGGTTGGACAGCCCTTAAGGAATCTAATTAAAACACAGCTTGTTACCAGAGCAGTGTATCACACTGTGCTGCCATAG---TAACCAGGATC-----CCACGGACCATCAGGGTCATCTGAGGGCATGTTGGCAAGAGG--CATGAGA ...x:.:...:.-:.........x::xx.:...---..::.:........:..:-x..::x..:.xxx.......:::....:..x.x...:...xxx.::.....x.:......x...:.:::...:.:x......x:.....:..........::....x::..x...::...x::....x::.....:........---:...x.....:-----:...x....x..x:..xx........:::.:..xx..x:...--...:... 12M1D20M3D18M1I144M3D11M5D42M2D7M 171/254 67.3% 255/94230402 0.0% 15/254 5.9% 53194972 NA +3083 chr4 + 190214555 89722182 89722181 89722255 74 GTGTTCCTGTAATCCCACCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x.x....:.:...x.....:..:........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 13688978 NA +25879 chr4 + 190214555 89726066 89726065 89726663 598 AGATAACGTTTTATTT----TAATT-CTCACCATTTATATACAAACACAAGTGAATAAAACACATCGCAAAATGGTAAAATTTCA-TATTTAGTATTTATAGGTGCATAGTTTCATGCTCACATATTTTTAAGTAT--------TATATATATTAACAAA----TTTCACAATACGTCATTATT---CTTAGACAGTATCATTAAAAGACACCTAAAAATCTTATAATATATGATAGCAAATCACTAACAACTTCTGAACAACAGCAACAAAAAAATAGTGAGGATTTAGAAATAAGTGGTAGTCACTTAGGTGTTTTTAATT-------TGTTTT--AACATCGTAGATTGAAGCCACAAAATCCACAGCACA-CAAAGACCCTGCTACCATGTATTCACTTCAGTGAAAGGGAAGCACCGAAATGCTGAGTGGGGGCAGGTACAGATACTTCAATCACTGCTGATGGAAGACTTCGAGATACACTGTAAAAACTTT-GAGAAATGTCATGACTGGGCACATTGGAACTGAGCACTTGTACAGGATGGAACATC--TGTCAGCAGATCTCA--AGAAACTGGGAGCAAAGATATTTCTTAGGCTTCAGGTTCGTAGTCTTGATACCCTTCCTA chr4 + 94230402 36527387 36527386 36528005 36527387 36527386 36528005 619 AGATTACATTTTATTTGCTTCAGTTGAACACCATT-ATTTACAGACACAAGTTAATAAAACACATCACAAAACAATAAAATTTCAACAGTTAATATTTATAGGTGCATAGTT-CATGCTCAGTTACTTTTTTATATATATAATACATACACATTTACATAAAGCTTTCACAATAAGTCTTTTCTGCACAGAAATAATAGTCATAGGAAACAAATAAAAATTGTATCATAAACAATATCAAATTACTGACAGCCTAT---------CAACAAAACAT--GTACAGAGTTAGAAATAAGCAGTAGACACTTAGGTGTTTTTATTTAGTATTTTGTTTTTAAACTTTTAAAAGTGAAGCCACAATATCCACAGCACAACAATGACCCTGCCAACCAGCTTTCATTTCAGCAGGAGGGAAGTGCTGAAACG--AGGTGGATGCAGTCACAGATACTCCAATCATTGCTGATGGAAGACTTCAAAATACACTGTAAAAACTGTAAAAAAATTTTACGACTGGGCACATTGGAACTCAGCACTTGTACAGGATGGGACGTCTTTGTTAGTAGATTTCAGGAGATACAAAGGAAGAAAAGATTTCTCATGCTTCAGGTTCATAATCTTGATACTCTTCCTA ....x..:........----:.:..-xx.......-..x....:........x.............:.....:::..........-:.x...:...................-........xx..:....xx:...--------:...:.:...x...x.----..........x...x..x:.---.xx.:.:.:..x:xx..::.:...xx.......:x...x...x.::...x.....:...:...:.:.x.---------........x.x--..:x:..x...........::....x................x..-------......--...x.:xx.:.x...........x............-...x........:.x.xx.:x....:.....::::.......::.:....:.--::....:x....x:.........:......:.................:.:................x.-:.:....x.:.:...................x..................:..:..--...:..:....:...--...x..x::.::x:..:.x......:.x...........:..:.........:....... 16M4I5M1I9M1D49M1I26M1D23M8I16M4I20M3I69M9D11M2D45M7I6M2I36M1I52M2D69M1I56M2I15M2I60M 456/583 78.2% 619/94230402 0.0% 51/583 8.7% 53198679 NA +6116 chr4 + 190214555 89729191 89729190 89729305 115 TACCTCAGAAGGCATTTCATAAGCCTCATTGTCAGGATCCACAGGCATATC------TTCCAGAATTCCTTCCTGTGGGGCTCCTTCTTCATTCTAATATTTAAAGTAAGAAGCACAAAAA chr4 + 94230402 36529453 36529452 36529572 36529453 36529452 36529572 120 TACCTCTGGAGGCATTTCATAAGCCTCATTCTCAGGATCCACAGGAATATCAGTATTATTCACCATTCCTTCCTGCAGAAAACCTTCTTCATTCT-ACATTTAAAACAGGGAGAGAAAAAA ......x.:.....................x..............x.....------x.:..xx...........::.::xx.............-.:.......::.:.:..x:x..... 51M6I38M1D25M 92/114 80.7% 120/94230402 0.0% 7/114 6.1% 53199738 NA +3343 chr4 + 190214555 89749823 89749822 89749961 139 TAACTCCTAGCACATTTTTAGTTAAA-AATATACATGCACAAAATATATGTGTAAATACACATGCTGATATCACAC--------------------------------ATATGTGTGTGTGTGTGTGTATATATATATACACAAAAGCAGATATATATATATATATATATAT chr4 + 94230402 70094042 70094041 70094210 70094042 70094041 70094210 169 TATTTTCTAATACATCTTTGGCAGATTGATAGTCATGCA---GCTATATGCAGAATTTCAGATTCTGGTATTACAAGACCACTTTGTTAGTAGCTGTCAAGGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..x:.:...::....:...:.:x:.x-:...xx......---:x......::x..x.x..x..x...:...:...x--------------------------------..........x...x...x.:...:.....::.:.x..:...x.x:...x........::.:.. 26M1I12M3D34M32I64M 93/136 68.4% 169/94230402 0.0% 36/136 26.5% 19655781 NA +3201 chr4 + 190214555 89749903 89749902 89749955 53 TGTGTGTGTGTGTGTATATATATATACACAAAAGCAGATATATATATATATAT chr4 + 94230402 34522012 34522011 34522064 34522012 34522011 34522064 53 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGT ...........:...:........:...x....x:x...:......x..:.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 55227891 NA +3265 chr4 + 190214555 89777789 89777788 89777847 59 GCACCTGTAGTCCCAGCTACTCGGGCAGCTGAGGCAAGAGAATCACTTGAACCTGGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::x:......x.xx.x...x..........::.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 13744583 NA +3409 chr4 + 190214555 89802589 89802588 89802681 93 TTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTT chr4 + 94230402 63697147 63697146 63697239 63697147 63697146 63697239 93 TTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.....:.:x..::.:.x....xx.....x....xxx:::..x..:.:.:x.x..:.:.:...::...::.........::....:.x... 93M 59/93 63.4% 93/94230402 0.0% 0/93 0.0% 26105442 NA +4136 chr4 + 190214555 89802596 89802595 89802705 110 CTTTCTTTCTTTCTTTC-------TTTCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ....x..:..:..:..:-------.....:...:....:.:x..::...x....x..:.:.x....xxx:::..x....:..x.xx...:.:...::.:.:.:.........:.... 17M7I93M 74/110 67.3% 117/94230402 0.0% 7/110 6.4% 26105479 NA +3112 chr4 + 190214555 89802607 89802606 89802702 96 TCTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTC chr4 + 94230402 32895607 32895606 32895702 32895607 32895606 32895702 96 TCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ........:..x...:..:..x..x......x.x.:.x:.x..xx:.:.x::xx:x...::::x:........x:.x......x:....:...... 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 56907000 NA +3787 chr4 + 190214555 89802610 89802609 89802753 144 TTCTTTCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTT------TCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC ..:.:.x.:.:x..x:::.:......::....x.x:x:.:x::...x.x.:x........x.::..:x:x...x..:..x...............------:.x::..:::x....x..x::..:x.::.........::..:x.::... 95M6I49M 86/144 59.7% 150/94230402 0.0% 6/144 4.2% 39626344 NA +3234 chr4 + 190214555 89802645 89802644 89802743 99 TTTCTTT---CTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTTTCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTT chr4 + 94230402 61949704 61949703 61949805 61949704 61949703 61949805 102 TTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTT .......---..:.x..x..x.x:.:..:..x.x...:x..:..x..:.:.:.xx.x:......:.............x...:..:x..xxx:.:..x.... 7M3I92M 67/99 67.7% 102/94230402 0.0% 3/99 3.0% 27852941 NA +3133 chr4 + 190214555 89802699 89802698 89802768 70 TTTCTTTCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTGT chr4 + 94230402 38921170 38921169 38921239 38921170 38921169 38921239 70 TTTCTTCCCCAGCCTTCTGGGGTTTCTTCTGTTTTTTCTTTCTTTCTTTTACTTTTGTTCTGATCTTTAT ......:..:xx.:....xxx:...........:...........::...x:..:.x..:.xx.:...:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 50881529 NA +3026 chr4 + 190214555 89802714 89802713 89802770 57 TCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTGTAT chr4 + 94230402 61558560 61558559 61558616 61558560 61558559 61558616 57 TCTTTGATTCCTATAGTTTTTTCTCTCTTTTTTGTCTTTCTTCTTCTTTTTGTTCAT .....x...:..x:x...:.....:......:.x........:..:.....x.x:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 28244154 NA +3436 chr4 + 190214555 89821198 89821197 89821299 102 GAAAAAGAAAGAAAAGGAAAGAAGGAAGGAAGGAAGCAAGAAAGAAAAAAGAGAAAGAAAGAAAGGGAGGAAGGAAGGGAGGGAGAGAGGGAGGAAGGAAGG chr4 + 94230402 73744688 73744687 73744789 73744688 73744687 73744789 102 GGAATAAATATGAAATTAAAGCATAAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG .:..x.:.x.x:...xx....x.x:.:xx..:.:.:x.......::...:.:......:.:..:....::.:..::...:x..:.x::...x....:.x.:. 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% 16076510 NA +3632 chr4 + 190214555 89821314 89821313 89821409 96 GGAAGGAAGGGAAAAGAAAGA--AAGGAAAGA-GAGAAAGAAGGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAGGAAAAAAAGTAGGGAGACTG chr4 + 94230402 58935721 58935720 58935817 58935721 58935720 58935817 97 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAG--AGGAAATTG ....x..:::.....x.:x..--.......:.-..::.:........:x.......x...:...:......x..x.x.:.::......--:...:.:.. 21M2I9M1I55M2D9M 69/94 73.4% 97/94230402 0.0% 5/94 5.3% 30885593 NA +3029 chr4 + 190214555 89821317 89821316 89821363 47 AGGAAGGGAAAAGAAAGAAAGGAAAGAGAGAAAGAAGGAAAGAAAGA chr4 + 94230402 86574861 86574860 86574907 86574861 86574860 86574907 47 AGGAAGGGAAAGGAAAGAAAGAAAAATGAGCTAGAGAAAAAGAAAGA ...........:.........:...:x...xx...:::......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 3246456 NA +3367 chr4 + 190214555 89821324 89821323 89821377 54 GAAAAGAAAGAAAGGAAAGAGAGAAAGAAGGAAAGAAAGAAAGAAAAAGAAAAA chr4 + 94230402 90892149 90892148 90892202 90892149 90892148 90892202 54 GAAAAGCAAGAAAGGAAAGAAAAGAAGCAGGAAGCAAAGATAGCAAAGGAAAAA ......x.............:.::...x.....:x.....x..x...:...... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -1070825 -93159577 +10863 chr4 + 190214555 89822218 89822217 89822421 204 ATGTAACACAAAACGTACACAGCCATACCT---TGCCCAACTGGTCCTTTTTGACAAAGCCAGTGGCTGCTGCAATGCTCCCTGCTCCCTCCACTGTCTTCTGGGCTACTGCTGTCACACCCGTCACCACTGCTCCTCCAACATTTGTCACTTGCTCTTTGGTCTTCTCAGCCACTG-GTACAAATAAAGAGCAACAACAGATTAAAG chr4 + 94230402 36579988 36579987 36580195 36579988 36579987 36580195 208 ATCTGAAAAAAAGCATAAACAAACCAACCTGTTTAGCCAGCTGATCCTTCTTCACCAAGCCAGTGGCTGCAGCAATATTCCCTGCTCCTTCCACTGTCTTCTGGGCCACTGCCGTCACCCCTGTCACCACAGCTCCCCCAACATTGGATACCTGCTCTTTGGTCTTCTCAGCCACTGAGGATAAGCAGAAGATGGAAAAACATTACAG ..x.:.x.x...:.:..x...:x.xx....---.:x...:...:.....:..x..x..............x.....::..........:.................:.....:.....x..:........x.....:........x.x:..:.........................-.x.:..::.:.::::::x..x.x....x.. 30M3I144M1I30M 157/204 77.0% 208/94230402 0.0% 4/204 2.0% 53242230 NA +3133 chr4 + 190214555 89826469 89826468 89826503 35 TCTCTCTCTCTCTCTCACACACACGCACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 77225164 NA +3696 chr4 + 190214555 89828138 89828137 89828196 59 CTTACCTGTTGCCACACCATGCACCACTCCCTCCTTGGTTTTGGAGCCTACAAAAACAA chr4 + 94230402 36586217 36586216 36586275 36586217 36586216 36586275 59 CTTACCTGTTGTGACACCATGAACAACTCCTTCCTTGGTCCTGGAACCTAAACAAAGAA ...........:x........x..x.....:........::....:....x.x...x.. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 53241921 NA +11884 chr4 + 190214555 89835514 89835513 89835719 206 CAAGCACCAAACTGACATTTGGGGTTTACCTACCTACATAGAGAACACCCTCTTTTGTCTTTCCTGCTGCTTCTGCCACACCCTGTTTGGTTTTCTCAGCAGCAGCCACAACTCCCTCCTTGGCCTTTGAAAGTCCTTTCATGAATACATCCATGGCTAATGAATTCCTTTACACCACACTGGAAAACATAA-AATACACTTTGAAT chr4 + 94230402 36592549 36592548 36592754 36592549 36592548 36592754 206 CAATCAGCAGCATGAC-CTTGCTGCCCACCTACCCACATAGAGGACTCCCTCTTTCGTCTTTCCTGCTGCTTCTGCCACTCCCTGCTTGGTTTTTTCTGCCGCTGCTACAACTCCCTCCTTTGCCTTGTTAAGTCCTTTCATGAACACATCCATGGCTGAAGGATTTCTTCACACAAAACTAGAAAAAAGAAGAACACACTTTTAAT ...x..x..:xx....-:...xx.:::.......:........:..x........:.......................x.....:........:..x..x..x..:..............x.....xxx...............:............:.x.:...:...:....x.x...:.....x.x..-..:.......x... 16M1D175M1I14M 166/205 81.0% 206/94230402 0.0% 2/205 1.0% 53242965 NA +5024 chr4 + 190214555 89894649 89894648 89895033 385 GAAAAGAAAGTTACTTCATATTTTTTCATGGGTTTTCCTGATAATA------ATTGCCTGTGCTTTCCCATTT------------ACCCTTA--------GCTTTGTCAGAGACCCTTCAGCACTTCCATAGAG-----------CCATCCCACTAGAGGTCACAGATCACAAAAA-CCCTACAGAAACAGGAAACCGAACTTCCTGAGTACGCTACAAAACACAGAAACCTGTTTCCTCTACACATCTCAAACTGGCAAAACTCAGT---------CTTAGCAGATTC---AGTGTGGAAGCAGCTATC---------AAAAAGGCCATAAGGATTTTGTCCCCAAATTTCACATGAGCTACCTTG------CTTCAAACTACTGAGATGAAGGGGGCAAGATTATTTGTCCTTCTTTCTAGTTTATGGAGTGGGGGCATTGGGCTTAA chr4 + 94230402 36615373 36615372 36615813 36615373 36615372 36615813 441 GAAAGGAAAATTACCTAATTATTTCATCTGGTTTCCCCCAGGATTACCAAACAGTACATATTTTTCCACATTTTTATTGTCATTAACCTTTATCCTGTATGTTCTGCAAAAACTTCTTTCTTCCTTCCACAAAGGCTGTCAGGCTCCTGCTCTCCAAGGGTCATAGGTTGCAGGGGGATCCACAGAAACAGGAAACCAGGCTTCCTCAGTCAGTTTTGAAACACCAAAATCTGTTTCCTTTCTACA----AAAC--ATAAAGCCCAGTAGGGCATTCTATGGTGGGCTCTCAACTGTACGAGTAGCAGCACAGGAGGAGAGAGAAGCTACGGGAGTCTTGCTTGGGAAATAGATGTGAGACATCCAGTAGCACTTACAAACCAGCAGAATGAAAGAGGTAATCTTG-CTGCTCCTATTGCT--CTTACAGAGTGGCAGCAATGGATTTAA ....:....:....:.x..xx...:x:x...x..::..:::x.x..------.x.:.x.:.x:..:.x.....------------...:...--------.:.:..:x.:.:x::...:xx:x......:.:..-----------..xx.:.x.:.::.....:..:.::..::::-x:.:................:::......x...xx.:.x::......x:...:.........:.x:...----....--::...:.:....---------:x.:.::.::..---.x...:x:..:...x::x---------.:.:.:..:.:::.::.:...:::xx:..x.xx.::....x:.:.:x.------:.x.....:.x::::.....:.:..:..xx..:-:..::.:.x..x..--:...::......x:...x...::.... 46M6I21M12I7M8I34M11I31M1I69M4D4M2D12M9I12M3I18M9I48M6I33M1D14M2D27M 225/376 59.8% 441/94230402 0.0% 74/376 19.7% 53279276 NA +14171 chr4 + 190214555 89906541 89906540 89906822 282 ATCAGTCTAGAAAGGT-ACAAAGGATTACTAGGTTTAAG-----------CAAAATGCTTGTCTGGGATCATTGCATTTGCCTTTAAACTGCCCATCACCATTTT---GCCATGCTTCATTTTCTATTTTTAAACCTACATTTT-----CAGATAATTTGGCTTTAAAATTATATTTACATTTTTAATATCCCTTAATGAGCTTATTTCATTGGTAGCATAAACCTAATTATGAGTCACACCAGGGGCTCTTTTGCTGTGGATAGTTCTTCTAATTTACCCTGGATCAAAGATTGCTGGGCC chr4 + 94230402 36625695 36625694 36625987 36625695 36625694 36625987 293 ATCATTCTGGGGAGGTTAAAGAGGGTTTTCAGGTTTAAGTTCCTGTTATGCAAAACAGTTGTCTG----TTCTGCCTTTGCATTAGCATATCCCATAATAGTTCTTTCACCATGCTTCATCTTCTGTTTTCAAATGTACATTTTTTTTCCAGACAATTTGATTTCAAAATTCTATTTACATTCTAAACATCTCTTAATGAGCTTAGTTCATTGGTAGCATAAAACTAATTATGAGTCACACCAGGGGCTCTTTTGCTGAGAATATTTCCTCTAATTTA-----GCTCAAAGATTGCTGGGCC ....x...:.::....-.x.:...:..x::.........-----------.....::x.......----:x:...x.....x..x:x.:xx.....x.:x:..:.---:...........:....:....:...:x........-----....:......::..:......x..........:.x..:...:.............x.................x..................................x.:...x...:.........-----.x................. 16M1I22M11I15M4D36M3I36M5I129M5D19M 222/273 81.3% 293/94230402 0.0% 29/273 10.6% 53280846 NA +5258 chr4 + 190214555 89909265 89909264 89909402 138 ATCTTCTTTAGGAATTGGTGTGCTTATGTACATACCAGGTTATCTCCCACAGTGATATTGGACAACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCTTGTGGCTGGACCGGTGGATCCTGTCCTCAGAGGTATGTA chr4 + 94230402 36630897 36630896 36631034 36630897 36630896 36631034 138 ATCTCTTACAGCAACTGGTGTGCTTATATCCATACGAGACTCTTACCAACAGTTGTAGTTGACAACCTGGAAACCTTCTCATCACGTAGAGCAAAGCCTTGTACTTGGCTTATTGGATCCTGTGCTCAGAGGTGTGTA ....::.x:..x..:............:.x.....x..::.x.:x..x.....x:..x.x.......x..xx..:.x:x:x:..x..:.::x.:::......:x:...x:::x..........x.........:.... 138M 91/138 65.9% 138/94230402 0.0% 0/138 0.0% 53278368 NA +14657 chr4 + 190214555 89911926 89911925 89912863 938 AATTGCTCAACTCTCTAGATCTCAGAAGATATCCAATCCTGTCTATAGGATGCAACATAAAATTGTCACCTCATTGGATTGGAGGTGCTGTCCTGGATACAGTGGGCCGAAATGTCAACTAAGAGGTA------------------------------CACTCTAATATTAATAATCACAAT--TCTGAACAATAAGAAACTGATTCTATTGAAGAAAAGAATAGCATTTCCCCTTTT----GAACCAAGGTAAATTAACATGTAGCCAAACT-CCTAGGACTGTTATACTTTC---------TAAGCTTTCTAACTTGGTAGCTTTTATAA-------------------CACTCTGAAATCTCATAAGCTATTCTTTAACTTCTCCCCCCATTTTTATGTTGGATTTATATGATGAGCAAATGGAAATCTGATGAAAGATCTTACTTATTCTTAACAACAAGCTATAGAGGCATGCCTTATTAAAATATCAGGAATGCTAATTTTC-----AATTTTTAA-ATAAAGTGTTATTAGAAG-----TGACTC-------------------------AATATA---------------AAAATAAGACTACCATCTAGTTTTGTTCCAGTTCAGTTATTTGAAATAATGTGCATATGAATGA-AATTTAGTATTAAAGGACATACAAGGTATGTCATGAATAATTCTCTCTTTTTCAAAATTCTAATGGAGCTATTTTTTTTTTTTCAGCTGAGGTTTTAAGGACTTTCTGGTGGCAAGGCTGATCAAACACATGGTAACCCGCTGTGGCCTAATATCCATGTGAC-------TATTATTTTGCTTTTGGCTTTAAACAG-----------GTTTCCTTTGAAAAATAAGATACAGCATCAGCATACATATTTTAAATGAATGAATATTACAAGAAAGGCCATTAGCAGTGGTGGGGAATTCAATCAACAGT-----ATAAGAGACTGTGATTAAAAATTAAT----AAAACTGTGGAGAAACCGTTATGGCTCACATTAAGAAAAAGAAAATTATAATAC-AAAAGCTCTAGGAATCCTGCA chr4 + 94230402 36633784 36633783 36634798 36633784 36633783 36634798 1015 AATAGTTTTGTTTTACAGGTCCCAGACAACAACACACCAAGCCTATAGGATTGAACATAAAATAGTAACATCGCTGGAGTGGAAGTGCTGTCCTGGATACAGTGGGCAGAACTGCCACCCAAAAGGTGGGTGAGAGTTGCACTGATTTGAAACCCATTCAGTTCAACAGAAGAAAGCAATACGGTCTTAATTGTACGTAAATGGCTCTGCTAAAAATCAATATGGTTCCTTCTCTTTTTTCAAAACCAGGAAAAATGCATGGTAGGCTAAAATGCTTTGAAATGTTG-ACTCTCCCCTGCATGTGAGCTTCCAGA----GCAGCTTAAGCAAAATGTCGTTTCCGTTCATCCACTCTAAAA-CTCATAA---CATCTTCAGC--CTTATTCCATTTTGCT-----------------AAAATATGGAGTTTGAATTCAGGGCTTCTCTACTTTTGACCTTTCAATTATTGAGTTCTGCAGTGCTGGAATATTA--AACCCAGGTCCTCCCTTGAATATTTGCTATAAAAT-CCATCTGCAGCACTGTGACCCTTTTGGCTTTTAGTTTGTCTCCAGGAATATATTTCACACATTCAGTAAAATAATGCACCAACTTTGTTTTCCTCTAAACTGAGTAGGAAATTTGTTGTTCAGTTCAATGGTGACTGAATTTTACTTGATATT--GTGCATTACATGTATAATTTTAGCTTTTT------TTTGACAGAACAGAACTCTTTACCCCTGCC-----------------CTGGTG---------ATCAAACATATGTTAACACACTGTAGTTTAACATCTGTGTAATAGCTATTTTTTTTTTTGCTTCTGGCCTTAAAAAGAAAAAAAAAAAGCTGCCCTTGAAAAATAAGATATGACATCAGCATGCATATTTTAAATGAATGAATATTACAAGAAAGGCCATTACATGTGATAGGGAGTTCAATCAGCAGTGGTAAAGAAGGGGCTGTAATTAAAAATTAATGTAGAGAAATGAAGAGAAATCACTGTTGTTCACATCCAG---GAGGGAATTCCAGTGCTGAAAGAGCCAGAACCTCAGCA ...x.:.:x::.:.x:..:..:....x:.:.x.xx.:.xx.:.........xx..........x..x..x..::....x....:.......................x...x..:..x.:..:....:------------------------------..x.::..:.xx.:x..x..xx.:--...x..:x:..x.x..x..::...::.:..:.xx.:x..:.:x::.:.:.....----:.....:.:x....xx.::xxx:..:...x.-.:.x.:.x....:-...:..---------.:.....:.x:.----.:.....xx::..-------------------......:...-.......---xx....:.:.--..:x::.......xx.-----------------.:x.x.....:x.:x:..xx.:.:::.:x..xx..:.x.x.xx:x.::...x...x:x...xx.::.::.....:.--..:x.x::.::..-----...x...:x-.....:.-::..:x.x..-----....:.-------------------------......---------------.......x:.xx.x.::.x.....x:..:.:x::::x..xxx:.xx.:x...x..xx.x....:-:.:.x.:.x...xxx..:..x--:x.:..xx....x......:.xx......------.:.:.::..:.x:xx:.:...x:::.x..:-----------------......---------........:...x....x.:....:.::...:...::...:.:-------.x..x........:....:.....x..-----------.:.x..:...............:::.........:.......................................xxx...:.:....:........:....-----.x...:.:....:.............----.:..x..x:......:.::.:.x.:......:x..---:..::....x:.:.:.-:....xx.:..:.x::.x... 128M30I24M2I54M4I31M1I13M1D6M9I12M4D13M19I10M1D7M3D10M2D16M17D76M2D13M5I9M1I7M1D10M5I6M25I6M15I64M1I21M2D29M6D30M17D6M9D43M7I27M11I101M5I26M4I35M3D16M1I21M 572/870 65.7% 1015/94230402 0.0% 213/870 24.5% 53278142 NA +9403 chr4 + 190214555 89915931 89915930 89916231 301 AAGACAGATTGCTTGGAAAACCTAGAATCTGTGGCAGTCCTTGTGATAGAGAATACATTTGGGGAGACAGAAAGATTGCTAAATGAAAAAACAAAAGAGCATCAATCAACGAGGCTCTTTATCACAAGAGAGTAACTGACTCCACTGTCAGAGATCCTATCAGCTCTTTGCTGTGGCTGGTTAAATCCCGTGTAATAAATTGGGATGAATGCAAGTACTGAACTCCAGTCAACAAACAAAGGTAGGGAAAGATAACATAAACTATTGAATTTGTAAAACAGGCATTTCAAGTTTTCAACAG chr4 + 94230402 36637546 36637545 36637840 36637546 36637545 36637840 295 AAGATGGATAATATAATAAATCTGCTGTCTGTTTCAGTAGCAGTAGTGGTAAATATATTTAGAGCAACAGAAGGATCGGTAAATGAGAGAATAAAAGGACATCGATCAGCTGG--TCTTTATCACAGTCAAGTAATTGACTCCCTTGTCATAGATTATATCA--TCATGTCAGCAACTGA-TAACTGATGTGTAATGAATTGGGCAAAATGCAAGCTGTTAACTCCTGTCAAT-AGCCGTGCCACAGTAAGATAACAGAAGCTATTGAAATTGTAGCTTAGAATTTTGTGTTTTTTATCAG ....::...x::x.::x...:..:xx:.....xx....xx:x..::.:.x:....:....:.:.x:......:...:.x.......:.:..:.....::....:....:.x:.--...........:xx:.....:.......x:.....x....:x.....--..x.xx.x.:::...:-...x.xx:.......:.......xx:........:xx.x......x.....:-.:.x:x.x:.x:.x.........x..:........x.....:xx:..:xx...xx:x....:.x... 113M2D47M2D16M1D52M1D67M 196/295 66.4% 295/94230402 0.0% 6/295 2.0% 53278385 NA +3347 chr4 + 190214555 89916333 89916332 89916407 75 TTCAGGAGTACAGTTTTCTCACTTAGATTCTGAAAAAAAAAAAACAAACAAACAAACAATAAA--TTTAACAATGCT chr4 + 94230402 90037228 90037227 90037304 90037228 90037227 90037304 77 TTAAAAAATGCAATCCTTTCATCCAAGTGCCAAAAAAAAACAACCAAACAAACAAACAAAAAATGTCTAACAGTGCT ..x.::.:.:..:.::.:...:::.::.x.::........x..x...............x...--.:.....:.... 63M2I12M 53/75 70.7% 77/94230402 0.0% 2/75 2.7% -120895 -94109507 +3430 chr4 + 190214555 89924703 89924702 89924803 101 ACGTGGTGGTGTGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCC chr4 + 94230402 76033196 76033195 76033288 76033196 76033195 76033288 93 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCC ..:::......:::.--....:.:.:.........::........x.xx.x...x.:.........:.:..x:xx:..:..:..------..x..x..... 15M2D67M6D11M 65/93 69.9% 93/94230402 0.0% 8/93 8.6% 13891507 NA +3594 chr4 + 190214555 89925687 89925686 89925759 73 ACACGTGGTGGCATGCACCTGTAGTCCCAGCTACTGGGAAGGCTGAGGCAGGGGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033194 76033193 76033264 76033194 76033193 76033264 71 ATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..:::....--.....x......:.........x.:.........x.xx.x...x.:........::.:.. 11M2D60M 54/71 76.1% 71/94230402 0.0% 2/71 2.8% 13892493 NA +10012 chr4 + 190214555 89927759 89927758 89928000 242 TTTTTTAATGGTCTCAATTTTCTCTTCTATATGCAGAAGTGATGCAAAAAATGACTGATCAGGTGAACTACCAGGCAATGAAACTGACTCTTCTGCAGAAGAAGATTGACAATATTTCTTTGACTGTGAATGATGTAAGGAACACTTACTCCTCCCTAGAAGGAAAAGTCAGCGAAGATAAAAGCAGAGAATTTCAATCTCTTCTAAAAGGTAAAAATGAAATAAAATAAAATATTCATTCA chr4 + 94230402 36641507 36641506 36641746 36641507 36641506 36641746 240 TTTTTTTTTCTTCTCATTTTTTTTTTTCTGACCAAGCACTTACACAAAAAATGAATGAGAATATTAGCAGCCAGGAAATGAAATTGACTTCTCTACAGAAGAAGGTTGACGACATTGCTGCTGCCATGAATGATTTGAGCAAGATGCTGTCTTCTCTGGAAGGCAAAATCAATGAAGATAAGGGTACAGACTTCCAATCTTTTCTAAAAGGTAAGAA--AAATAAATTAATGTAATCACTCA ......xx.xx.....x....:.:..::xx.:xx..x.x.x.::..........x...xx.x:.x.:.x:.....x.......:.....::...:.........:.....:.:...x..x:x:.::........x.:..x..x.:x:xx..:..:..:.....x...:...::........::.:.x...x..:......:.............:..--.......x...x:..x...:... 217M2D23M 168/240 70.0% 240/94230402 0.0% 2/240 0.8% 53286252 NA +37490 chr4 + 190214555 89934788 89934787 89935963 1176 TATTAATTATTTCTTTCTCTAGGTCTAAAATCCAAAAGCATTAATGTACTGATAAGAGACATAGTAAGAGAACAATTTAAAATTTTTCAAAATGACATGCAAGAGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCTATCAGAGGACCTCGAAAGCACCAGGCAAATAATTCAAAAAGTTAATGAATCTGTGGTTTCAATAGCAGCCCAGCAAAAGTTTGTTTTGGTGCAAGAGAATCGGCCCACTTTGACTGATATAGTGGAACTAAGGAATCACATTGTGAATGTAAGGCAAGAAATGACTCTTACATGTGAGAAGCCTATTAAAGAACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTCTAGAACAGGAACACTCAAGAAGCATTCTGTATTATGAATCCCTCAATAAAACTCTTTCTAAATTGAAGGAAGTACATGAGCAGCTTTTATCAACTGAACAGGTATCAGACCAGAAGAATGCTCCAGCTGCTGA-GTCAGTTAGCAATAATGTCACTGAGTACATGTCTACTTTACATGAAAATATAAAGAAGCAGAGTTTGATGATGCTGCAAATGTTTGAAGATTTGCACATTCAAGAAAGCAAGATTAACAATCTCACCGTCTCTTTGGAGATGGAGAAAGAGTCTCTCAGAGGTGAATGTGAAGACATGTTATCCAAATGCAGAAATGATTTTAAATTTCAACTTAAGGACACAGAAGAGAATTTACATGTGTTAAATCAAACATTGGCTGAAGTTCTCTTTCCAATGGACAATAAGATGGACAAAATGAGTGAGCAACTAAATGATTTGACTTATGATATGGAGATCCTTCAACCCTTGCTTGAGCAGGGAGCATCACTCAGACAGACAATGACATATGAACAACCAAAGGAAGCAATAGTGATAAGGAAAAAGATAGAAAATCTGACTAGTGCTGTCAATAGTCTAAATTTTATTATCAAAGAACTTACAAAAAGACACAACTTACTTAGAAATGAAGTACAGGGTCGTGATGATGCCTTAGAAAGACGTATCAATGAATATGCCTTAGAAATGGAAGATGGCCTCAATAAGACAATGACTATTATAAATAATGCTATTGATTTCATTCAAGATAACTATGCCCTAAAAGAGACTTTAAGTACTATTAAGGATAATAGTGAGATC chr4 + 94230402 36647359 36647358 36648516 36647359 36647358 36648516 1158 TATTTCTCCTTTTTTTCTGAAGGTCTCAAGTCCAGGAGTATTAATATGTTAGTCAAAGATATTATCAGAGAACAGTTAGAAGTATTTCGAAGAGAAATGTTAGAGAACATGGCTCAGATTTTCAAGACGGTGTCTAGTTTGTCAAATGATCTTGAAAATACAA-------------AAGAATTAGTGAAGC----ACTTAAATGAAACCCAAGAAAAAATTTCTCTAGACA-AAGACATAAGGCCAACAAATCTTGACATTTTGGAGCTGAAGAGTCATATGCTGCAGATGAAAGAGGAAATGACCCGAATTTGTGACCAGCCTATGAAAGCTTTACAGAAAAAGCAGAAATCCTTGGAAGACAACTTGGAGCTTCAACAGTCAAGAAGTGTCATTTATTATGAATCTTTAAATAGGACCCTTAATGAAATGAGAGATGTTCATGAACAACTATTATCAACTGAAGAGTCTTCAAGACAAAACATCCCTTCAACAGATGAAGTCACAGAGTA-CAATATTACAGAGTACATGTTTAATCTGCATGAGAAGGTGAAAAAACAGGACCTGATAGTACTACAGATCTATGATGACTTAAGAGTCCAGGACAACAAAATCAGCAACCTCAGTCTTGCACTAGAAATTCAGAGAGGTTCTGTTCTGGGAGTCTGTGATGACTTGTTGTCAGAGAGCAGAAAGGATTTCCAAATGCAGCTGTCAGGAACCCAAGAAAGTGTGGTTGTCCTAAACAGAAGTGTCTCTGATTTGGTCCTTTCATTGGACAGTAAGATGGACAAAATGAATGAGCAAATTAATGATTTGTCCTATGATATGGAGATCCTGCAACCCTTTATTGAACAAGGTCCACCTTTTAGTCTGACTTCTGAGTATGAACAACGAATCCAATCTGAAGCAATCAATGAGAAGCTTGAAAACCTCACAACTGTTGTTAACAGAATGAGTTCTACCATTAAGGAACTCTCAAAAACTCAGGAAGGACTTAAAAACAAATCTCAGGCTTATCAGGAGCTCTTGGAGAGTCATATGAATGAATGCACTGTGGAAATAGAAGATGGATTAAACAAGACCATGATAGTAATAAACAATGCTATTGATTCTATTCGAGATAATTATGTACAGAAAGATACGTTACATGCTCTGAAAAATGAGACTGAGGTC ....xx.:x...:.....xx......x..:....::..:......:.::.::.x.:...:..x:.x........:..x:..:.x....:..:x..x...:x.....x::.:..x...x.:........x..:..x...:.:...:.x..:..:....::..x.-------------..:.:...:....x.----::..x...::x.x..x..x....:...x.:.x.:::-....x.xxx....x..xxxxx:...:..xx....:..:.:..:...:..xx..x.x:.:.::x.:........:.xx.:x.....xx.......x....xx:..x.::x........xx:x:..:....:::x::.:..:.xxx....x........::.:x.x...........::.x....::..:...xx.:..x...::..x..x.....:..:..x............x..x:x...::x..:..x.x:x..:..:.x.x...-....xxx..:.-:...:.:..x..........:..x.:.:.....:..x:.:..:..:...::::....::.:..:..:..x.x...x..:..:x:x:.:..:..x.:...:..:.:...:....x:x.:x.x:.:..:..xx...:..:x...x.:xx:..x.xx.....x...x....:..x:.:x.......x.....:x..x.x..:..xxx:.:x..xx....:.:.x.:xx...x:....:x:..xxx.xx....xx.xx..:..:..x......:.................:.......x.x.........x.:.................x........xx....:..:..xx..:.x:.:..x.x...xx:x:x:..........x..xxx..x.x:x..::..x.:x:.:...x.x.....:..x..x.x..:...:..:..xx.:.:..:..::..:..:.....:x......xx..x:.xxx.....:...::..x:x....x.::.x.x..xx:...:..:..x.:...x.......:::.:x.:.....:........x:.x..:.....x....:x:.x.....:.............::....:......:....:x.x:.....x..x...x:.:..x.x..::..:.x.x....:.. 163M13D15M4D36M1D268M1I11M1D664M 749/1157 64.7% 1158/94230402 0.0% 20/1157 1.7% 53287429 NA +7159 chr4 + 190214555 89939989 89939988 89940257 269 GCCACTTCCTTTTGAGCCATTCCTACATTCA-TTCATGCTATTTCTGATTCCTA---GTAGGCCACTGATGATAAGATATTCTGGTTCAATTGCTAAATATTTGATTTGTTTCTAAACAATATTCTAATAGACACCAAGAG------GTTTTTA-TTTCATCTTTGAAGATTTGTTTGTACAGCAATTGGCAGACTTATCCCTGCAGAGAGCTTTTGGCTGCTTGCCCTTCCAAA-AGCAGCTGAATCCTGACTTAACACAATGTCAGCAGCTCACTGCTG chr4 + 94230402 36653138 36653137 36653391 36653138 36653137 36653391 254 GTCACTTCCTTTTCTGACATTTTCAGATCGAGCCCCTGGCATCACATTTTTCTATAAGGAGGCCA--------------------TTAAATTGCTAAATATTTTATTTGCTTCTAAACAATATTGCAGTAGATACTGGTAAAGCTTCATTTTTATTTTTATGTTTTAATACTAATTTATACAGC-ATTGGCAG-CATATTTCCCAAAAGAGCTTCTGGCTGCTTGCCCTTCCAAAGAGCAGAAAAACCCAGCATTAACCAGCTATC-----CTCACTCCTG .:...........xx.x....:::.x..:x.-::.x..x:..:x.xxx..:...---.x......--------------------..x...............x.....:..............x:.:....:..:::x.:------:......-...:..x...x..x.:.x:...:......-........-.x...::.:xx.:.......:....................-.....xx:..:..x.xx.....xx:x.:..-----......x... 31M1I22M3I8M20D56M6I7M1I29M1D8M1D41M1I30M5D10M 178/242 73.6% 254/94230402 0.0% 39/242 16.1% 53286851 NA +3484 chr4 + 190214555 89947142 89947141 89947224 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTAAGTCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:...........::........x.xx.x...xx:...:.::....:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 13913945 NA +25402 chr4 + 190214555 89952976 89952975 89953518 543 TGCCATTTTTTCCTCTAACAGATTTTTCCAAAGGATCTTACAGATATGCACCCATGGTGGCATTTTTTGCATCTCATACGTATGGAATGACTATACCTGGTCCTATCCTGTTTAATAACTTGGATGTCAATTATGGAGCTTCATATACCCCAAGAACTGGAAAATTTAGAATTCCGTATCTTGGAGTATATGTTTTCAAGTACACCATCGAGTCATTTAGTGCTCATATTTCTGGATTTTTAGTGGTTGATGGAATAGACAAGCTTGCATTTGAGTCTGAAAATATTAACAGTGAAATACACTGTGATAGGGTTTTAACTGGGGATGCCTTATTAGAATTAAATTATGGGCAGGAAGTCTGGTTACGACTTGCAAAAGGAACAATTCCAGCCAAGTTTCCCCCTGTTACTACATTTAGTGGCTATTTATTATATCGTACATAAGTTAGTATGAAAAACAGACTATCACCTTTATTGAGAAACAGCCAGTGTTTTCATTTATCTTTGCTTGCACATCTGCTCTGTTTTGGTTTTTCTACAGGAA chr4 + 94230402 36658023 36658022 36658556 36658023 36658022 36658556 534 TGTTCTTTATTCCTTTC-CAGATTTTTCAAAGGGATCATACAGATATGCACCTATGGTGGCCTTTTTTGCCTCTCATACGTATGGGATGACGACTCCAGGACCCATCAGATTTAACAATCTGGATGTCAATTATGGAGCTTCATTTGCCCCAGCAACTGGGAAGTTCCATGTTCCATATCTTGGGGTGTATGTTTTTGAATATACCATTGAATCATTTAGTCCCCGTGCCTCTGGCTATTTGGTTGTTGATGGAATAGACAAACTCAGTTTTCAGGCTGAAAATATTAATAGTAACAAATATAATGACAGAGTAATTGCTGGCAATGCTTTATTGGAGTTAAATTATGGTCAAGAAGTATGGCTCAGACTGGCAACTGGTTCTATACCAGCCAAGTACCCACCAGTCACTACATTTAGTGGTTACTTATTGTATCGTACCTAAATCGCTCATAAATGTAAACATTCACCATCA-AATGAAGCACCTGGCATATACATTTATCTTTGCATTTAAA-------TATTTCATTTCTTTCACAGCAA ..::x...x.....:.x-..........x..:.....x..............:........x........x..............:.....x.:x..x..x..:...xx:.....:..::........................x.:.....:x......:..:..:x:x:....:........:..:........::.:..:.....:..:.........x.:.:.:::.....x.x...:..x.................:..::xx...x..x.............:...:.x.x.:.:x:...:..:..xx.x:....x:....:.....:..:...........x..:.....x...:.xx....x....xx..xx.x..x..........x:..x..x..:..............:..:.....:........x...:.::x.xxx...x::.:..xx.....x.:.-x:x...:..x.::.::.x.x.............x.x:.x.-------.:...::x..:..::....x.. 17M1D455M1D40M7D22M 393/534 73.6% 534/94230402 0.0% 9/534 1.7% 53294953 NA +3710 chr4 + 190214555 89971552 89971551 89971671 120 TTTGCTTCTCCATTCTTTTTCTTTCCCCATCTCTTCCCTCTTCCCTCCTCCTCTTCCTCTTCCTTCTCCTTT---------TCCTCTCCTCCTTC---------TCCTCCATCTTTTCCTCTTCCTCCTTTTCTTCCT chr4 + 94230402 92917601 92917600 92917738 92917601 92917600 92917738 138 TCTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCT .:.x......::.x..xx:x.:x.....x.:...x..:.:....:::.x.:..:...:.::...:.:.::..---------..:.........x.---------.:........x...:::x...x.:..::..:... 72M9I14M9I34M 78/120 65.0% 138/94230402 0.0% 18/120 15.0% -2946049 -91284353 +3272 chr4 + 190214555 89983591 89983590 89983665 75 AAAACCCTGTCTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 49163116 49163115 49163190 49163116 49163115 49163190 75 AAAGTTTTATCCCTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAAT ...::::.:..:..x..:...:...............:..x...xx..x.x.:.:.::.......x:.x...x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 40820475 NA +3106 chr4 + 190214555 89983601 89983600 89983663 63 CTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 49163128 49163127 49163190 49163128 49163127 49163190 63 CTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAAT ...:.x...:...............:..x...xx..x...:.:.::.......x:.x...x.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 40820473 NA +3068 chr4 + 190214555 89983613 89983612 89983668 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 88488613 NA +3121 chr4 + 190214555 89983615 89983614 89983668 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -46461 -94183941 +3282 chr4 + 190214555 89983615 89983614 89983670 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 88488615 NA +3014 chr4 + 190214555 89983617 89983616 89983675 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 38511127 NA +3496 chr4 + 190214555 89983617 89983616 89983672 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 88488617 NA +3014 chr4 + 190214555 89983621 89983620 89983679 59 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 38511131 NA +3174 chr4 + 190214555 89983622 89983621 89983675 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 4435202 NA +3305 chr4 + 190214555 89983626 89983625 89983679 54 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 4435206 NA +3302 chr4 + 190214555 89995328 89995327 89995388 61 AGTCCCAGCTACTTGGGAGGCTGAGGTGGGCGGATCACTTGAGCCCGGGAGGTTGAGGCTG chr4 + 94230402 76033214 76033213 76033274 76033214 76033213 76033274 61 AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ...:...........::........x:xx.:.:.x.......:...:.:..x..x:..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 13962114 NA +34059 chr4 + 190214555 89998117 89998116 89999028 912 CTAATACTGCTCATTGAAATGTAAATCACAGTAAATGACCCGTATAGGAATAAATGGACAAACAGCAGAATAAATGGACAAACAGCAGAATAAATAAAAATGTATTACCTT-TATACAGCCGTTTGTCTTCTGATAGCATGAGTAAAGCTTAAGTCAGATACAATTAAATGGACTGAAGCTTTAACAATGACTTTTGAACTGCTTGATTTAACAAACTCAATCCTCATAAATTAAACTATCAGTGATCTATGATACAATTAAGTTCCATAATCAAAAAATGCTA-CAGTGCATGCAGTGTCACTTGCACTATTCCTAACGCTGAATTTTAACTACTCCTGGCTACCTCTTCCTGCAGGGTTGTGTAAAACT-CCATCTGGCACACTAGACACTAACATTATGATACATGGTTTCTTTTCTATTCTTCAATTTAGGCTGACATCTGGTGGTCCAGGGGAACAACAAGCAATGCCTCCGAATGTAAACCGATTCACAAATGCGGCTTTTTTTCCCAGTTTTCCCTTTGTCTTTTTGAAGTGCTTGAAATTGCCACCAAACCAGTTAATTAC-ATGGAAATTCACATAGAATAACA-ATTT---------AAACAGCAG-AACAATAA-GGGTGAA-GAAAGTGACCTTCACGTGATGAATTATATACATGTAAGTATATTGAACTCAGCGGTGACTAC---AAAGCATCAATAGAAAGCACCATATATTGGCCAATTAGACTCACTCAGAAAGGGTACTATTTAATGGCACCACACTGGGGATCATAATGGGAATGTGGTACATGTAAGATTTCCTTCTTTTTTTCTCCCTGTCAAGATAGTTGGAGGGAAGGAAATGAAGGGAATGAGGGGGAGGGGTAGAGGGAGCTACTGTGTATAGTGAGAAATTGACGTTTAAACAGGCATGAGGTAGT chr4 + 94230402 36671308 36671307 36672174 36671308 36671307 36672174 867 CTAACACTTTGCATTTAAATATAACTCACAGTTAGTGACAGGTTCTGAAATAAGTATACAAGTAGGGGGCGAAA---------------------------GCATTAGTTTATATGTAGTCATTTATCTTCAAATAGCACAAGCAAAGCTTAAGTCAGATACAGTTGAATGAACTGAAGCTTTAACAGTGTCTTTTGAACTGCCTGAATTAACAAAATCAATCCTCATAAATTAAACTATCATTGATCTGTGATACAATTAAGTGCTATAATCAAAATACGCTCTTGGTGCATGCTGTGTAAC-CGTACTTCCTCCAGCACAGAATTTTAACCACTGCTGGCTAACTGCTCTTGCCATGTTGTGTGAGACTCCCATCTGGCATGTGAGACGCTAACATTATGATACAGTATTTCTTTTTCATTTTTCAATTTAGGCTGACATCTGCTGGTCTACGCAAATGGCAGGCAACCCTGCTGAATGCAAACCAATTTGAGGCGGCAGTGATTT----CAGTTTTCCCTTTGTCAGTTTACAGAGCTCAGAACTGCGACCAAAGCACTTAATTACAAAGGAAATTCACAGTGAATAATACATCTCTGGAAGAAGAAAGGCAGCAACAATACTGTGTGAAGGAAAATGAGTTTGACATGATAAATTACATGCACGCA--CACCCTGTGTGCAGT-GTAAGTACTCAAAGGAACCAATAGAAGCTACTGTATATTGGCCAATTAGACCTACACAAAAAAGGTGTTATTTAAGGGCACCACACTGTGGGCTGTAATGAGGAGGCTGT--AGGTAGGAGTTAACTCTTTTT---GCCCTATCAATAAGGCTAAAGA------------------GAGGGGGAGTGGCAA-------TACATTGGGCAATCAGCTCTAAACGTTTGAGCAGGTGTATGGCAAT ....:...x:x....x....:...x.......x.:....xx..x:x.:.....:.:x....::..x:.:xx...---------------------------.:....x:..-...::..:.:...:.....x:......::..:...................:..:....:...............:..x............:...x........x.........................x......:..............x.:..........x.:...x-::........x....x..-:.:...x:::.:.:.:.x..........:...x.......x..x:..:...x:x.......:.:...-..........:::x....:................xx:........::...:.....................x.....:.x.x:..:::..:....:x.:x.:.....:.....:...::x::xx..:.:xx...----................xx...:x..x...:::..:...x......x..x........-.x...........xx......:.-..:.---------:..x:....-.......x-.x.....-....:...x:..x..:....:.....:..:..:.:.--:.:x:..x::x...:-..:.x...---..:.x.:........:x:..::..................::..x..:...:...::.......x............x..::::.....:.:.x.:x..--.x...:..x..xx:.......---x....:....x.x:.:.::..:------------------.........x..:.:-------...xx..x::.:.x..xxx.x:......:.:....::.:x..:.:. 74M27D10M1I172M1I18M1D67M1I136M4D57M1I23M1I4M9I9M1I8M1I7M1I36M2D15M1D8M3I99M2D21M3D22M18D15M7D46M 624/847 73.7% 867/94230402 0.0% 85/847 10.0% 53326809 NA +3096 chr4 + 190214555 90005428 90005427 90005497 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 13972231 NA +3017 chr4 + 190214555 90005574 90005573 90005650 77 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCTACCTCATTTGACTTATATTCTAGAGTGATCAGGTAAACAATA chr4 + 94230402 44642749 44642748 44642825 44642749 44642748 44642825 77 AAAAAAAAAAGAAAAAAAAATCCTTAGAAATTCCCAATTGATCCTTCTTATATTTTCAACTGATAAGATATAAAATA ..........:.........xxxxx.:.......:.x:.x..::xx........:.x:.x....x..:..x.x.... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 45362825 NA +3618 chr4 + 190214555 90013453 90013452 90013568 116 CATGGTGGCTTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTCAAGCCACTGCACTCC---AGCCTG chr4 + 94230402 76033197 76033196 76033312 76033197 76033196 76033312 116 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ..::....--...:.x......:.........:.::........x.xx.x...x::...........:..x:xx:..:..:..-:.xx:..x.:.....x:x..:::x..---...... 8M2D73M1D26M3I6M 77/113 68.1% 116/94230402 0.0% 6/113 5.3% 13980256 NA +3165 chr4 + 190214555 90014100 90014099 90014177 78 TTAGAAAAAGTTTTTAAAAATTTAAATAACAATAATAATAAGTGAAAAAAATCAAGTTCCTTGTTAATTTTACATTTT chr4 + 94230402 37499091 37499090 37499168 37499091 37499090 37499168 78 TTAGGCAGATCTTTTAAAAACCTACATGACAATAATCATAAGTAACAAGAATTAATATTAATGATAACTTTTTTTTTT ....:x.:.x:.........::..x..:........x......:.x..:...:..xx.:xx..x...:...x:x.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 52515009 NA +3265 chr4 + 190214555 90096379 90096378 90096448 70 CACACATAAATATATGCATATATACACATATAGTTAGTTGTATATGTATATCATACATACACATATTTAT chr4 + 94230402 23977531 23977530 23977600 23977531 23977530 23977600 70 CACAGATTAAACTATACACCTACACACTTTTATTTGGGTGTACATGTATGTTATACATAAACATACCTAT ....x..x..xx...:..:x..:....x.x..x..:.x....:......:.:.......x.....::... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 66118848 NA +3023 chr4 + 190214555 90107706 90107705 90107757 52 TATTTATGGCAATTTCAGTTGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 92137923 92137922 92137974 92137923 92137922 92137974 52 TGTTCATAGCAACCTCAGTGGAAATATTTTTGTGTGTGTATGTATGTGTGTG .:..:..:....::.....x.::..:.x.x.........:...:........ 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -2030217 -92200185 +3741 chr4 + 190214555 90113657 90113656 90113856 200 TCATATACATCCTGTTCATATAAATTCTATACATTAATA--TATATTATGTATAATTATGTGTGTATGTGTATATATAT------CTCCTGTAAATATACGTGTGTGTGTGTGTGTATATATATATGTATATGTATATATATATATACGTATATATATGTATATATATATACGTATATATATATGTATATATATATATACGTATATAT chr4 + 94230402 89812856 89812855 89813060 89812856 89812855 89813060 205 TTAAATATTTCCTGTTCAGTTGATTTCT-TATACTGGTAATCAAGCTGTCAAGATTTCTGTGTGT-TGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:.x...:x.........xx.:.x....-..:.:.::..--:.x::.:.xx.x.x..x.......-...::.:.x::..------:.x..xx:xx....:..xx....x....-.:.....x...x:...:.......x..x..::x:xx...:..:..:.x.:x:x:..:.....:.x:x.:...:.:.:.:......:..x..x.. 28M1D10M2I24M1D13M6I28M1D94M 123/197 62.4% 205/94230402 0.0% 11/197 5.6% 300801 NA +4094 chr4 + 190214555 90113743 90113742 90113849 107 ATATACGTGTGTGTGTGTGTGTATATATATATGTATATGTATATATATATATACGTATATATATGTA--TATATATATACGTATATATATATGTATATATATATATACG chr4 + 94230402 21109195 21109194 21109303 21109195 21109194 21109303 109 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...:.:......x.x....x.::...x........:x:::.....:x::.:...x....::......--:..::x.x.::......:.:....x....::..::.:... 67M2I40M 71/107 66.4% 109/94230402 0.0% 2/107 1.9% 69004548 NA +3231 chr4 + 190214555 90113847 90113846 90113940 94 ACGTATATATATATATATACGTATATATATATGTATATATATATACGTATATATATATATATATATATG-TATATATATATACACACACATACAG chr4 + 94230402 74437241 74437240 74437335 74437241 74437240 74437335 95 ATGTAGAACTAAATGCAAACTTATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGTTGTACTTGTATGCATCTAGATATGG .:...x.xx..x..::.x..x...x..........:......::....x:..x.:.:.....:.::...-.:..:x.:...:..:x:.x...::. 69M1I25M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% 15676606 NA +3416 chr4 + 190214555 90122613 90122612 90122674 62 ACACGCACACACACACACACACACAAATATATATGTGTGTGTGTATGTATGTGTATATATAA chr4 + 94230402 44243249 44243248 44243310 44243249 44243248 44243310 62 atatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGA .:.:::.:.:.:.:.....x.....x.:.:.:.:..........:...x...........:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 45879364 NA +3243 chr4 + 190214555 90122614 90122613 90122677 64 CACGCACACACACACACACACACAAATATATATGTGTGTGTGTATGTATGTGTATATATAAATG chr4 + 94230402 22600209 22600208 22600272 22600209 22600208 22600272 64 CACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ...:::..x.....::..:...x......:...:.x.......:.:....::.::.::...:.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 67522405 NA +4360 chr4 + 190214555 90150585 90150584 90150674 90 GTACCTCATTCATCTTCATCAC-TCTTATCAATGTCCTAAATGTAATAAGCAATTTGTTGTTAAAACCAGTACTGACCACAGTGATCATTT chr4 + 94230402 36733592 36733591 36733682 36733592 36733591 36733682 91 GTACCTCGTTTGTCTTAATCACATTTTGTTACTGTCCTGAACGTAATAAACAATAAGTCATTAAAGCTAGTCATGACCTCCATGATCTTTT .......:..::....x.....-.:..:.:.x......:..:.......:....xx..::.....:.:...xx.....x.x:.....x... 22M1I68M 67/90 74.4% 91/94230402 0.0% 1/90 1.1% 53416993 NA +5919 chr4 + 190214555 90239145 90239144 90239370 226 GCCAGAAAGTTTTAG---------TCAATAA--------CAAAAACACATTTTTTGAGTAGTTGTTTAACATGATTAAAAGCACACTTG-GACTTTAATTAGGAAACAATAAACATACATCCCATAGGAGTTAATCTTTGTAAACAACACCAATTTTGAAGGCTA--CAGTCAGTTATATTGATCACTTCAGTGATACTGAGACATATACTGCACTTTATGCATTGATCTTTGACATAGAAAGATC chr4 + 94230402 36765617 36765616 36765853 36765617 36765616 36765853 237 GCCTAGGAGTTTTAGAACACACTTTCAATAAGAGGTGGAAAAAAACAGATTTTTAGAAT---CATTTTGTGTAGTAAACAGAGCATTTGAGATAACAATCAGAGTACCATA----TGTGTCTTTCAGGAGCTAATCTTTTTA--TAATGGCTTTTCTGATGGATGTTCAGCCAATGATATTGATCACTTCGGTGCTACTGAGACATATACGGTGCTTTCAGTATTGATTTGTGACATTATGAGACC ...x:::........---------.......--------x.......x......x..:.---::...x:::.::.x..x..x:..:...-..:xx:...:..::x..x...----.:::..::x:.....:........x..--:..::x.xx..:...x..x.:--...:..:.x..............:...x...............x.::....xx.:......:.x......x:x:...:. 15M9I7M8I20M3D27M1I21M4D27M2D21M2I79M 150/217 69.1% 237/94230402 0.0% 29/217 13.4% 53473528 NA +3221 chr4 + 190214555 90243014 90243013 90243080 67 AAGACTGAATATTCAGCTAGTTGATCTCTCTCTCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847259 45847258 45847317 45847259 45847258 45847317 59 AAGGCTGGCT-TTAAGCTGGTTG-------CCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:...:x.-..x....:....-------:..:..x.............................. 10M1D12M7D37M 51/59 86.4% 59/94230402 0.0% 8/59 13.6% 44395755 NA +3398 chr4 + 190214555 90271805 90271804 90271898 94 TACTACCTGAGACTGGACAATTTATATATATATATATATATATATATATATATATATA---TTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGGAG chr4 + 94230402 33250975 33250974 33251071 33250975 33250974 33251071 97 TATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAAAG ..:...:.x.x..x.x.x::...x.x.x.:.:.:.:.:.:.......:.:........---.....x...x.....x..x.......x:..:.::.. 58M3I36M 65/94 69.1% 97/94230402 0.0% 3/94 3.2% 57020830 NA +3172 chr4 + 190214555 90271812 90271811 90271880 69 TGAGACTGGACA-ATTTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792598 24792597 24792664 24792598 24792597 24792664 67 TGAGAAAGAACAGAATTACTTATGTA---AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .....xx.:...-.x...:x...:..---.x...................x:........x......... 12M1I13M3D41M 55/66 83.3% 67/94230402 0.0% 4/66 6.1% 65479214 NA +3404 chr4 + 190214555 90271825 90271824 90271895 71 TTTATATATATATATATATATATATATATATATATAT------ATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAG chr4 + 94230402 7823262 7823261 7823338 7823262 7823261 7823338 77 TTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAG ....:...:.........:.:......x.:.:x.x..------...:...x..:..............x:..x:... 37M6I34M 55/71 77.5% 77/94230402 0.0% 6/71 8.5% 82448563 NA +3517 chr4 + 190214555 90272863 90272862 90272932 70 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--...:.x....:.:.........:.::........x.xx.x...x.:...........:.. 8M2D60M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 14239666 NA +4384 chr4 + 190214555 90276161 90276160 90276327 167 TCTAGCAGGAAAGACTTGAACACTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176252 50176251 50176414 50176252 50176251 50176414 163 TCTGGCAAGATGGATTTT----CTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...:...:..x:..:..x----....:.:x:.x..:..:..::...:..:x.:.x::.x:.:..x.x..x..::..::x......x.x.::x.::..x::.:...:...:....xxxx.::x.:...::x:..:...x::......:.........::.:.x..... 18M4D145M 96/163 58.9% 163/94230402 0.0% 4/163 2.5% 40099909 NA +3046 chr4 + 190214555 90276198 90276197 90276279 82 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 + 94230402 66493586 66493585 66493667 66493586 66493585 66493667 82 CTATTTTGCTATTTTTCGTTTTTAATTTTTCGGTTTTTGTATTGTATTTTTTTTTTTCTTCCATCCTCCCTTCCCTTCCCCC ..x.:..x..x.:....x..:..xx...:.:xx...:.x.x..x:x..:...:...:.....x....:......:.:.::.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 23782612 NA +3011 chr4 + 190214555 90276317 90276316 90276366 50 TTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTTTTTTTTTTTTTGGA chr4 + 94230402 53756248 53756247 53756297 53756248 53756247 53756297 50 TCTTCTTTCTTCCTCTCACTGGTCTCTCTTTTTTTTTTTTTTTTCCTGGA .:.........:..:..x:.xx...:.....:............::.... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 36520069 NA +4369 chr4 + 190214555 90282931 90282930 90283151 221 ACTAAGTGATCAAAGTCACATCAAAGCATTTGGTATAA-GGAAACAAAATGATTGTGATACTGCATTAATGGAAGGTTGCTTTCTCATGCTTTGAAAATAAACGGCTTTGCTTTACCTGAATATTTATTTCCAGTATATTTCTTCCTTGCAATCTACTACATGAAACAGAGGGGGACCGTTATCTAGTGATAACATGTTTTTCTAGTTACATTATATGTTAA chr4 + 94230402 75352585 75352584 75352765 75352585 75352584 75352765 181 ACAAAATGGTCATAAGTGCATCAA----TCTAATGTAATAGCAAGAATGTCATTGAAATAGAAAGTTGTCAGAGGATCAATGTCCCCTGCCTTGAAAATAAACG---TTGTTTTGACTCAGCACTTATCT----------------------------------AGCAGCAGGAGACCATTATCTTGTGATAACATCCTATCCTATTGACATTATCTGCTAA ..x..:..:...x.:x::......----.:.::.:...-:.x..x..x:.x....x:...xx:x:..:x::..:.:.::x.x..:.x...:.............---...:...:x..x.::.:....:.----------------------------------.:...x:..:....:......x..........x:.x.:...x.x.......x..:... 24M4D10M1I65M3D23M34D58M 120/180 66.7% 181/94230402 0.0% 42/180 23.3% 14930346 NA +3129 chr4 + 190214555 90302635 90302634 90302745 111 TATGAAATTTTTTTTAAAGTTAATTGGGCATGATGCTGTATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGAAGGATGGCTTGAGCCCAGGAATTCGAGGATGTAG chr4 + 94230402 76033172 76033171 76033277 76033172 76033171 76033277 106 TATGTAATGTCATGAAAGGATGAT---ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...x.:x.xx..:.x.:..---:..:::..x..:.:.--......:...........::........x:xx:x.:.xx:.....:.....:.::.:x:..x..... 24M3D15M2D67M 69/106 65.1% 106/94230402 0.0% 5/106 4.7% 14269463 NA +50924 chr4 + 190214555 90308264 90308263 90309613 1350 AGTGCAAGC-CTTTGATTCCCAATGGGGGACTCAGGATCAAGACGATCTACCCTGGTCTCCCGGTTGCCAATATTCAGAAGAAGTATTAACAGAAGACATGATTCTCTTCCTTCTTCACCTTCTTCCAGTAATACAGTTGGTGTCCACAGTTCCTCTCCTTCCAGCACTAACTCAAGCTCAGGTAGCACAGGTAAACGGAGGAGCATATTCCGTACTCCTTCCATTAGCTTCCACCATAAGAAGGGGAGTGAGCCTAAGCAAGAGCCTACCAACCAGAACCTTAGTATTTCAAATGGTGCTCAACCTGGTCACAGCAATATGCAGAAACTGAGTTTGGAAGAACATATTAAGACCAGGGGAAGACATTCTGTTGGTTTTAGTAGTTCACGAAATAAGAAGATAACAAGATCTTTGACAGAGGATTTTGAAAGGGAAAAAGAGCACTCAACTAACAAGAATGTCTTTATAAATTGTCTAAGTTCTGGCAAAAGTGAAGGGGATGATTCTGGTTTCACAGAAGACCAAACTCGTCGTTCTGTTAAGCAGTCAACAAGGAAGCTACTCCCTAAATCTTTTTCATCTCACTATAAATTTTCTAAGCCAGTTCTACAGAGCCAATCCATTTCATTGGTACAACAGTCTGAATTCTCATTGGAAGTTACACAGTACCAAGAGAGAGAACCTGTATTAGTAAGAGCTTCGCCATCCTGTTCTGTGGATGTAACAGAACGGGCAGGAAGCTCTTTACAATCTCCTTTGCTTTCTGCTGATCTTACCACAGCTCAGACACCTTCAGAATTTTTAGCCTTGACTGAAGATTCTGTGTCTGAAATGGATGCATTTTCTAAAAGTGGAAGCATGGCATCCCACTGTGACAACTTTGGCCACAATGATTCTACCTCTCAGATGTCCCTCAATTCTGCTGCTGTTACAAAGACAACAACAGAACTTACGGGAACTG-TTCCCTGTGCAATTATG--TCTCCTGGGAAATATAGGTTAGAGGGTCAATGTAGCACTGAATCTAATTCATTACCGGAAACCTCTGCTGCTAATCAGAAGGAAGTGTTATTACAAATTGCTGAACTACCTGCTACAAGTGTGAGCCACTCAGAGAGTAACCTAC-CAGCAGATAGTGAAAGAGAAGAAAATATAGGGTTACAAAATGGTGAAACAATGCTGGGGACAAACTCCCCAAGGAAACTTGGATTTTATGAGCAAC------ATAAAGCAATAGCGGAACATGTAAAAGGGATCCATCCTATTTCAGATTCAAAGATAATACCTACTTCTGGTGATCATCATATTTTTAACAAAACATCACATGGATATGAAGCAAATCCTGCCAAAGGTATG chr4 + 94230402 36788440 36788439 36789781 36788440 36788439 36789781 1342 AGTGTGAACACCTCGTGCCCTGATGGGGGACTCAGGATCCAGGCGATCAACTCTAGTATCTCGGTTGCCAATATTCAGGAGAAGTATTAGCCGGAGACATGACTCCCTCCCTTCCTCGCCTTCCTCTGCCAGCGCTGTGGGTGTGCACACCTCCTCCCCATCCAGCACTAACTCCAGCTCAGGGAGCACAGGCAAGCGCCGGAGCATATTTCGAACTCCTTCCATTAGCTTCCATAACAAGAAAGGGGGGGAGCAAAAGCCTGATGCCGCCAGCCAGAATGTTAACATCTCAAATGGTGCCCAGCCTTCTCTCAGCACTTTTCAAAAACTGTGCCTGGAGGAACACATTAAAAGCAGAGGAAGGCATTCGGTTAGCTTTGGCAGCTCTCGCAGCAAAAAGATAACAAGGTCTTTGACGGATGATTTTGAAAAGGGAAAGGAGCCTTCAGCTAATAAAAATGTCTTTATAAATTGCATAAGCTCTGGCAAAAATGAGGGTGACGATTCTGGCTTTGTGGAGGAGCAGAGCCGCTGCTCTGTCAAACAGTCCACACGAAAACTGCTCCCTAAATCTTTCTCATCACACTACAAGTTTTCCAAACCGGTTCCACAGAGTCAATCAGTTTCCTCTGTGCCTCAGACTGGGTGCATGCTGGAGATAAAATCCTACGTTGAAAGCGAGCCAGTGATTGCTGCATCCCCTTCTCCATGCTCAGCTGAGGTGACAGAGTGCATGGGGAGTGCTTTGCAGTCTCCACTGCTCTCAGCTGACCTCACGGCTGTCCAGACCCCCTCTGACTTCATAACTTTGACGGAGGATTCTGTTTCGGAGGTTGATGCTCTGCCCAGCAGTGGGAATGGAGCGTTGCTTAAAGAGGATTTTGGCCACAGTGTCTCTACCTCTCAGATAATCTTTAATCCTGCTGCTGTTCCATTGAAGAAAACGGATTATGTGGGAAGTACTTGCCAGTCCGCTTCTGTATCTCCTGCAAGTCAT------GCAAGCTTGTGTAGTGTTGAATCTAATACCTTGTTCAAAACCTCAGCTGCTGTTCAAACAAAAGCATCACTGCAAGCCAATGAACTTTGTGTTACAGATGCCAGGCA-TAAAGGAGAAATGAACTCAGCAA--AGTTGAATAT-AGAAACCTTTGCGTTACAGCATAAAGAAGAA---CTGGGGTTGCACTCGCCAGCAGCAAAGGAGTTGAGTGAGGACCAATTGGAAAACACGTTCTCTAAGCACATAAGAGAAACAATTCCTGTAATGGAACCTAAGATTATTCAATATTC---TGAACCTCAGTCCTTT---AGAACACAACAGGGATATGAAACAAACCATCCTAACGGTATG ....::.:.-.:.:.xx:..::.................x..:.....x..:..:..x..:.................:..........:.x.:........:..:..:.....:..:.....:..::x:.:::.x..x.....x....x:.....:..x..............x........x........:..:..xx..........:..x....................:x.:.....:...:.x....xx....xx..xx.::...:......:x...::..:...........:..:...xx..x.....x.x.x..:......x.::....:.....:.....:.x...:.....:.....x...:.:...:.:..:..x..x.::..:...........:........:..x..........:..:...:....x:...:....:..:.................:x....:..........:...:..x..:........:..::::..:..x..:.x:..::.:.....:..:.....x...x.:..:..:..............:.....x.....:..:.....:..:..:....:......:.....x:....x.:x..:.xx...x...::.x.x:::....::.x.x.:xx...xxx..:..x..:..x..:x.x.:x:x.x.::.x:.x:.x..:..x.:x..x..:.....::.x:::..:..:x....:..:.....x:....:..x.....:..:..x:.x.::.....x..:..x..x..:x..:.:.....x..:........x..x..::.x.....x:.x:.:.:x.....:.:::x:..:.:x.x:x:x..x:.:..........:..x:..............:x:.:.:...:...........x..xx..x:.x...:..x:x.::.....x.:-..x..x..x.:x..x..--.......x:.:x:..------.x::.::x:.....:::..........x.x..:::x:.......x......:x...:.x::...::.:.:.:...::::x......x:x..:....::..:x..x..-.x.::...x..:xx..-.....:--...x:..x.x-.....x:x.x.x......:x..::x...:x.---......x::x....x...:x::x.xxx.::..xx:....x.x.------.x..x:.:x.xx.x:.:..::...:..::.:xxx....:.xx::..x:.x.....x..x.xxxx...---...x.x...xx::...---.:....:x...x.........:....:.x.x.:..x...... 9M1I952M1I17M2I15M6D107M1D16M1I6M2D10M1D31M3D43M6I67M3D16M3D42M 904/1331 67.9% 1342/94230402 0.0% 30/1331 2.3% 53519824 NA +11310 chr4 + 190214555 90312802 90312801 90313073 272 ACATTTGTAAAAACTACATTTAAATATTTACCTTCATTTTTATTTATTTTCCTTTCCATAGTT---CTTGCCAGTAGTCTCAGTCCATTTCGTGAAGGAAGATTTATAGAGAGGAGACTGCGATCCTCGTCAGAAGGCACTGCAGGGAGTAGCAGAATGATTTTGAAACCGAAAGATGGAAATATAGAAGAAGTTAATAGTTTAAGAAAGCAAAGAGCAGGTTCTTCATCTTCAAAAATGAACAGTTTGGTAAGTATATACATATGTCTGCCTCT chr4 + 94230402 36794096 36794095 36794364 36794096 36794095 36794364 269 ATATTTGTAGAGAATA------ATTCTCTGTGATGATTGCTGATTGCTTGTCTATTTGTAGTTGATCTCGCCAATAGCTTCAGTCCATATCGAGAAGGCAGATTTATGGAGAAGCGACTCAGATCCTCCTCGGAAGGCACTGCTGGAAGCAGTCGACTGATCATAAAACCAAAGGATGGCAATGCAGAAGAGCTTCACAGTCTACGGAAGCAGAGAGCAAGCTCATCCTCTTCAAAAATGAATAGCATGGTGAGTTGATTCTTGTGCGTGTTTTT .:.......:.:.x..------.x.x.:.::xx.x...x:.:x..::..x:..x.:::.....---..:....:...::.........x...x.....x........:....:.x....xx.......x..:...........x..:..:..:x..x....:x.:.....:..:.....x...::......:x..x.:...:..x.:.....:......:.:..x..x..............:..:x....:...xx..x.x.:..:x..::.:. 16M6D41M3I209M 188/266 70.7% 269/94230402 0.0% 9/266 3.4% 53518706 NA +3474 chr4 + 190214555 90314616 90314615 90314694 79 AGTGGTTGCACCTGTAGTTCCAGCTACTCAGGAGGCTGATGTGGGAGGATCACTTGGGTCCAGGAGTTGGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGT-GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-....x................::::.......xx:xx.x.:.x......:::....:..:.xx:.....:.. 6M1D72M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 14281416 NA +17702 chr4 + 190214555 90330260 90330259 90330931 672 GAGGGTAACCAGCTGTCAGATAATTCATATCATGTATTAGGCTTCAGTTGGGATGAGACAGTATATCTCAGCATGCTGTTACCTTCAGTAAGATTTATGTTCCAAAG---TGTGGATACATTAATACAAATAGTGATTTTAAATGAAAAG---CAGATCAGCCACCTAGCTATGGTTCATGAATCACAGTGATTCTCACTTTATCTTTCTCTCTTTTATTTTTTAATAATAATAATAAAAGTACATAGAAAGTATCTCTGAGCCAAGTGGGTGCCAGAGTACATTGATGCTAAAGCTTTAACTTGACCCAGCCGTCCACTGGAAGTTGCTATAGCTGAGAAAAAAAGAAGTGAGGCATAGATGCTGGGTTTACATTTAGAAAAAGAGAAAGGAACTATTAATGCGTGCTTTT---CTCTAATAGCATTTATCTCTCTAGGAAGTCCTGCATAACAAAAGAAGTTGGGATGCCATTAAGTTTTATGAAGTGATACTATGATTTCTTGAAGGGAACTTACTATTACGCTGCTGGAAGCCTGTAAGGTCTGTTAACTAAAGAAGTTCAAAGATAGCCACAGTTGTTCAGTATATAGTTTTGCTTTGTATTTTTTTGATTCAGTGCAGTGGGGTTGAACATAA-AAGATGCTTGAATCTTCAGC--TTTTCATGAT-----TCTCTGCTTGTT chr4 + 94230402 36808324 36808323 36808945 36808324 36808323 36808945 622 GGGGGTTTCTGGATGTCAGATTCTTCGTTGCATGTAT----ATTCCACTAAGATGAAGCAATGAGTCTCAGCATGTTGGTGTCTTT-GTGAGGTTTTTATTTCAAAAAGATACAGATAGATGAATACAAATCCTGAACTTGAGTTGAAAGGAATAGTCAAGCCATTCAGCCATGGTTCATGAATCACAGCAATTCTTGTTTTA----------------------------ATAACTTGAGT---TGGGAAGC--------------TGGATGCCAAACTACTCTGAGCTTGCTGCTTTAAGTGGACTCAGCTGTCTACTGGAAGGGCCTACAGGTGGAAGAGAATAGAACCAAGCAGGGATGCTTTGCTT---TCTAACACAAGAAAGGAAAACCATTAATGCATGGTTTTGGTCTTGGAGAGCATTCACCCTTCTATGCAGTC-TGCATGACAAAGGCAATTGTAGCGTTATAGAATGGTATGGAGTGATACACTGATTTCTTCAAGCATATTTATAGCCACTCTGTAGGCGGTCTGTAAGGTCTATTAACTAGAGAAGTTCAAAGATACTCATTGTTGTTCAATA-------------TTTATTTAAAGAATTCCATGCAGTAGGGTGTCTGATAAGAAGGTTTTAGGATCTTCTGTTGTCTCTGTAATGCACGTTTCTGTTTGTT .:....xx.::.x........xx...:.xx.......----x...x::.::.....::..:.:x:..........:..x.::...:-..:..:...x.:..:....:---.:::....x..x.........xx...x:..:.:.x:....---:..x:x.....:::...:..................::.....:::....----------------------------....:xx:...---.:.:...:--------------...:.....:.x...x:...xx:.:xx.......x.x...:....:...:........xxx...:..x..::.:.:..x::.::x.:...x:......xx.:..---.:..:x.x....:.::::...:........:..x....---..:x:.x......:.:.::....x.x....-.....:.....:.x.:...x:::.::..x:.:.xx....:........xx.........x...x:x.:...:x:::..x...:x..x:.:...........:.......:...............x:..:x........:..-------------.x.....xxxx:....x:......:....xxxxx....-...:.x:.x.:......x.:--.:.:::.:..-----.:....:..... 37M4D45M1D20M3I40M3I50M28D11M3D8M14D104M3D38M3I30M1D142M13D38M1I20M2I10M5I12M 410/605 67.8% 622/94230402 0.0% 84/605 13.9% 53521936 NA +3348 chr4 + 190214555 90352533 90352532 90352591 59 GTGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x....:.:...........::...:....x.xx.x...x.............:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 14319327 NA +3171 chr4 + 190214555 90352668 90352667 90352790 123 AAAAAAAAACATATATGTATATATACACACACACACACACGCAGATAGTAACAGGTAGCATGATTTAGTAAACATAACATTGAATAACTGTTTTTCCTGTAAAATGGGGGAATAATATATACC chr4 + 94230402 25262931 25262930 25263035 25262931 25262930 25263035 105 AAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATAGTCAGAAATAGTA----CTATCAAATATGGTATTTTATTACT--------------AGAAGGGAGTAGAATATGCC ......:x.x............x......:.:..x:....::.x.....x.x.::...:.----:..x:...:..:::...xx..x...--------------.x::....:..:x....:.. 60M4D25M14D20M 72/105 68.6% 105/94230402 0.0% 18/105 17.1% 65089737 NA +3117 chr4 + 190214555 90354728 90354727 90354817 90 TTTTAAGTACTACAAGAACCAACTAGCATGTGGCCTTAGAAATGTTCAAATAGAATTTAGATAACTTCTGATTTTTTTTTCCTAGTGGAA chr4 + 94230402 74583140 74583139 74583225 74583140 74583139 74583225 86 TTATACCTATAATAAGAATTCATTGGTAT----TATTAGAAATATTCAAATAGAATATTTATAATGTCTCATTGATTATTCCCAGTGGAA ..x..xx..:x.:.....::x.:.:.:..----:x........:............x.xx....:x...x...xx..x....:....... 29M4D57M 61/86 70.9% 86/94230402 0.0% 4/86 4.7% 15771588 NA +3057 chr4 + 190214555 90359822 90359821 90359879 58 TATGTGTATATATATGTGTATATATATGTGTGTATATATATGTGTATATATATGTGTG chr4 + 94230402 86633934 86633933 86633991 86633934 86633933 86633991 58 TGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .::..:x:.....:.x......:..::...........:..x.....::..x...:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 3725888 NA +3217 chr4 + 190214555 90359846 90359845 90359906 61 TATGTGTGTATATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATATAT chr4 + 94230402 86633930 86633929 86633990 86633930 86633929 86633990 61 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT .::...:...x:.......x.:....:...:....:......::.x...:..:..x.:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 3725916 NA +3020 chr4 + 190214555 90359870 90359869 90359923 54 TATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATGTATATAAT chr4 + 94230402 44815600 44815599 44815653 44815600 44815599 44815653 54 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACAAT ...:......:...:.....x:...........x.:.x..:.:..::.:.:... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 45544270 NA +3124 chr4 + 190214555 90359870 90359869 90359936 67 TATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATGTATATAATTTTTTTTTTTTTT chr4 + 94230402 48958675 48958674 48958741 48958675 48958674 48958741 67 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGATTTTTCCAATCTTT .:.:...x......:....:.:..............x....:x.x..xx:.:......::xx.:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 41401195 NA +3018 chr4 + 190214555 90365361 90365360 90365401 41 ATATATGTGCATATATACATATACACATATATACATACATT chr4 + 94230402 28777205 28777204 28777245 28777205 28777204 28777245 41 ATGTATGTGCATATAGACATATACACAGACATATATACATT ..:............x...........x.:...:....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 61588156 NA +3183 chr4 + 190214555 90369331 90369330 90369407 77 AAAGAAGAAGAAGAAAGAAAAGAGGAGGAAAAGGAAAAGAAGGAAG--AGGAGAGAAAAGGGAAAGAAAGGGAAGAAAA chr4 + 94230402 55453399 55453398 55453477 55453399 55453398 55453477 79 AAGGTAGAGAGAATCAGAAAAGAGGAGGAAAAGGAAGATAAATAAGTAAGGAAAAGGAAGAGAAATAAGCTAAAAAAAA ..:.x...:::.:xx.....................:.x..:x...--....:.:::...:....x..:xx:..:.... 46M2I31M 54/77 70.1% 79/94230402 0.0% 2/77 2.6% 34915932 NA +3215 chr4 + 190214555 90384065 90384064 90384129 65 TGTTTAGTTTTTCGAACCCTCGTTTTTTTTGTTGTTGTTGTTTGTTTTTTTGGTGCAATCATTTT chr4 + 94230402 44646905 44646904 44646963 44646905 44646904 44646963 59 TGCTTGTTTTGTTGAA------TTTTTTTTGTTGTTGTTGTTTGCTTTTTTGGTGGATTTTTTTT ..:..:x...x.:...------......................:..........x.x.:x.... 16M6D43M 49/59 83.1% 59/94230402 0.0% 6/59 10.2% 45737160 NA +3195 chr4 + 190214555 90391414 90391413 90391488 75 CATGTACCCTATATATATAAATATATGGGGGTATATATATATATATATATATATATATATATATATATATATACA chr4 + 94230402 46063291 46063290 46063365 46063291 46063290 46063365 75 CATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...x....x..:..:.:..x..:.:.:x.:.:.:..:.x:..:...:.x......:......:xxx......... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 44328123 NA +6991 chr4 + 190214555 90400004 90400003 90400134 131 GTTTCTAATTGTTGGTTTTGATTTTTCTTCAGGATGTTTTGAATAATTTGGGATCTTGTGAACTGGATGAAGATGATCTAATGCTTGATCTTGAATTTTTAGAGGAACAGAGTCTTCACCCTTCTGGTAAG chr4 + 94230402 36844490 36844489 36844618 36844490 36844489 36844618 129 GCTTTTGCTTATTTGTTTT--CTTTTTATTAGGATGTTTTGAATAACTTGGGTTCCTGTGAGTTAGATGAAGATGATCTGATGCTTGATTTGGAGTTCCTAGAAGAACAACATCACCATCGTGCTGGTAAG .:..:.:x..:..x.....--:....:x.:................:.....x..:.....::.:..............:.........:.x..:..::....:.....:x:..x:..:.x.x........ 19M2D110M 98/129 76.0% 129/94230402 0.0% 2/129 1.6% 53555514 NA +3096 chr4 + 190214555 90403359 90403358 90403428 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 14370162 NA +3520 chr4 + 190214555 90413957 90413956 90414204 248 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT-ATCTTCTTCCTAAAA--GGAGCAGTAGTACAAATAATGATAGAAATAAAATATGTTTTATAG-TGCAGTAAGTGGA---TATTATTATTTTTATGAAA---GCCAGGAAGAACAATTTCAATGAAAGAATGGTATATGAATT---CAAAGTGAGTTCCTAAAAGGAGATAGCCTTGAGAGGAAAAAAATTTAAAAATAAAATTAAAA chr4 + 94230402 90030076 90030075 90030330 90030076 90030075 90030330 255 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTACTGGTAGAAATGTAGCATT-GTAAAAATCATGCT-----TTAAGACTGCCCCACAACTACAGTAAATTTAGCCTCATTTTGTTCTTCTGTAAATGATCCTGAAGAGAAATGTCAGTGAAGAATCATTTCAGAAAATGACAAGATTAAGTGGCCAGAGGTGAATGCTTTTTAGTGAAAAATGATACAACAGGAAAATAAAGA ...x.......xxx:...::..............:.:.:............x.-..:..x:.xx..:..--.x....x.-...x....x...x.-----.x..:xx..::::.:.:-.:......:.xx.---.xx.x..:..:..x..x..---::.xx.....:x...x...:....::.x::x.x:.x:..x.---x.:.x.:...xx.:.:.:.x::..:x::..x..x.:....x:..x:..x.:x.....x..:. 53M1I15M2I8M1D14M5D17M1I13M3I19M3I41M3I62M 152/242 62.8% 255/94230402 0.0% 19/242 7.9% 383881 NA +3253 chr4 + 190214555 90413957 90413956 90414009 53 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 88918957 NA +3071 chr4 + 190214555 90413961 90413960 90414011 51 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495050 1495000 1494999 1495050 51 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGAT ...x.:.........x.:....x..........:.:..:...:.....x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 88918961 NA +3060 chr4 + 190214555 90426757 90426756 90426817 61 ACTCTATTCTCTATATCAGTAAAAGCCATCATCAAGTTATTAAACAGAAGTGATAGCTCTA chr4 + 94230402 26476664 26476663 26476724 26476664 26476663 26476724 61 ACTCTATTCTCTCTGACAGCAACAGCTATTATTGAGTCATTAAATATAAACATTATCTCTA ............x.:x...:..x...:..:..::...:......:.x..:::x..x..... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 63950093 NA +3024 chr4 + 190214555 90439292 90439291 90439329 38 AGGAAAACAAAACAAAACAAAAACAAACAAACAAAAAA chr4 + 94230402 37643087 37643086 37643124 37643087 37643086 37643124 38 AGAAAAGCAAAACAAAGTAAAAACAAACAAACAAAAAA ..:...:.........::.................... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 52796205 NA +3855 chr4 + 190214555 90467246 90467245 90467324 79 CATGATAGTGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGT chr4 + 94230402 76033197 76033196 76033275 76033197 76033196 76033275 79 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ..:::.:....:.x......:.:.........::........x:xx.x...x.............:..x:xx:..:... 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 14434049 NA +3503 chr4 + 190214555 90471849 90471848 90471919 71 CACCTGTAATCCCAGCTACTTGCAAGGCTGAGGCAGGAGAACCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........x.........x.xx.x...x..........::.:..x:xx:..:..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 14438642 NA +4101 chr4 + 190214555 90473936 90473935 90474083 148 TAGGGGTTTTGTGTTGAAAAGCAGGTGAAATCCCTTCTGTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGCACGCCTATAGTTCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033151 76033150 76033277 76033151 76033150 76033277 127 TAGGGACCTGGTTTGGGAAAGTATGTAA---------TGTCATGAAAGGATGATA----------CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:::.x..x.x.:....:.x..:.---------...xx.:...:x.::.x.----------.:::....:.....--.:.................:........x.xx.x...x..........::.:..x.xx:..:..:.. 28M9D18M10D14M2D67M 89/127 70.1% 127/94230402 0.0% 21/127 16.5% 14440785 NA +3015 chr4 + 190214555 90496971 90496970 90497008 38 CAAAAAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAT chr4 + 94230402 75300455 75300454 75300492 75300455 75300454 75300492 38 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT ...................:.:...:.....:...... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 15196516 NA +5585 chr4 + 190214555 90501138 90501137 90501295 158 TACCTTTGCTGACCTTCATTACAGATTCATTTTTAAATCATTTTG----TTATTGATGGTAATAAATATATTTGATATTCACAGGAATTTCACTTGAAAAAGATAAAAGATTTCATAGTAGTAATAGAATGTTGGCTAAGTAGCTAATTATTGCATACTTAA chr4 + 94230402 36908996 36908995 36909153 36908996 36908995 36909153 158 TACCTTTTCTGTCCCTCATTACATGTACATTTAAAATTCACTTTAGATATTAATGATGCTTATAAATCCATTTGCTATCCATAGTGATTTCACTAGGGAAGACTGAAGTCTTTCA---TTGTAATGGAGCTGCAACTAAGTA-TTAGTTATCGGATACTTAA .......x...x..:........x:.x.....xx..x...:...:----...x.....x.x......x:.....x...:..:..x:........x.::..::x.:..:xx.....---.x.....:..::xx:::.......-:..:....:.x........ 45M4I66M3D24M1D19M 110/154 71.4% 158/94230402 0.0% 8/154 5.2% 53592142 NA +7678 chr4 + 190214555 90509941 90509940 90510066 126 TAAATTTTTATGGGACATAGTGATTAAATCTGTGTCTAAAAGCAATTAATGCCCTATATCTGTAGTAATGTCAGATTTTCATGGTTTATTAATCTCACAGTGTGCTAGAACTTTAACATTTCTCCT chr4 + 94230402 36914380 36914379 36914505 36914380 36914379 36914505 126 TACACTTTTATGGAGTATGGTTTTTAAGGCTTTGTCTGAAGGCAATTAATGCTCTGTATCTGCAGTAATGTCACATTTTCTTGGTTTATTAATCTCACAGTAGGCTGGAATTTAAACAGTTTTCTT ..x.:........:::..:..xx....:x..x.....:..:...........:..:......:..........x......x....................:x...:...:..x....x..:..:. 126M 100/126 79.4% 126/94230402 0.0% 0/126 0.0% 53595561 NA +3067 chr4 + 190214555 90511279 90511278 90511360 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGTGTGAACCCGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.::........x.xx.x...x:::x.......:.:..x.xx:..:..::. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 14478078 NA +6247 chr4 + 190214555 90519636 90519635 90519903 268 AAAAATAAT-GTAACTCCACTAATAGTAATTA--TGA-----TGCTTAATACTTACTTTTGGTTTTGCCAGAATAGATTTAAAATATTGATTGATG-----------GCACTTTTATTAAATTCTACCAGATACTGAGGAGTTGTAACTCTTGGACTAATACTTTGGAAGCAAAAGATCATTTACATTTCATTAACATTTAATTATCTCAGAACATCTCTGTTCTACCAATGACTAACAGATTCAGAAAAAAACTTAAATAATCTTAACTCT------TACACTATTCAAAAA chr4 + 94230402 36917558 36917557 36917848 36917558 36917557 36917848 291 AAAAATAATTGTAGGTTCTCTGCAAGGAGTTAAATGAAAAATTTATTATTATTTCATTCAGATGTTTTGAAGCTAGATTTTACATGTTGTCTGAGGTGCTGACATGAGCACTTTTGGTGAGCTGCAGCAGCTGTTGTGCAGTTACCACTCCACAGATAATGCTTTGAGACTAGCAGATTATTTATATTCCATTAACATTTAATTAGCCCATAGTACCTATGCTTTACCGATGACAGATGGATGCAGTCAACATCAGGACTAG--CTAGCTTTTTAAAATGCATTATTTAAAAA .........-...:x.:.x..:xx..x.:...--...-----.xx...x..:..xx..:x.:.x..x:x.::x.......x.x..:...x:...x.-----------........:x.:.::.x:.x...x.::..x.x....::x....:xx::x....:.....::.x:.:x....:.....:...:................x.:..x.::.:..x..:.:....:.....x:.::...x...xx..x.x.xx:.x..:--:..:..:.------.:..:....:..... 9M1I22M2I3M5I54M11I155M2D8M6I15M 173/266 65.0% 291/94230402 0.0% 27/266 10.2% 53602078 NA +3140 chr4 + 190214555 90524455 90524454 90524512 58 TGTTTTTTTTGTTGTTGTTGTTTGTTTG-TTTTTGAGATGGAGTCTGACTCTGTTGCCA chr4 + 94230402 27444627 27444626 27444685 27444627 27444626 27444685 59 TGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGTAGGAAATACAACTGTATTGTTA ............................-......:x.x.:.:.x::...x.:...::. 28M1I30M 46/58 79.3% 59/94230402 0.0% 1/58 1.7% 63079828 NA +11672 chr4 + 190214555 90527806 90527805 90528253 448 TATATTTTAGTAAATTGATGGTATTGTTTAAGTAGAAATGAAGAA--AATATATAATAGTTTTTAAAGCTTTACCTAAAAT-ATACAAGTCTTGGCAGG---AATACATACTATTCCCCATTTATTTATTT-ATCATTGTATTAAATCTTTTTGCTGACAGCATAGGGGAAATTATGATGATTTAAAGAGTGAGT----ATCAGTATTTGACAGAGAAGGAAAATGATGATAACATACAAGCAGTTATTTATAACAAAATTTAACTTTAAAGTGGCAATTGCTTCATATTTGATTTATGCATTTATCCTAGGTGGTAGAACAGACTTCCCCTGTCCAAGGAGTGACCTTTA-AAGGTGGCTATTGCAATATGAAAATATACATTTTGAGAGTACAGTGATTATGG-AAATGCAGAAGAAAAAATAGTTGTGTGGCATGT------TTTGCAGATTTTTTTTCTTTTT chr4 + 94230402 36920836 36920835 36921297 36920836 36920835 36921297 462 TATGTCACAACAAATGGGTGTCATTGGGCATG---AACTGAAAAATGAAAGTACAGTGCTTTTGAAACAACTACATGAAATTATACAACTCTCTTAAGATCTAAAGCGTACTTTTTA--ATCTATTTTTTTTATCACCATATTAAATCTTCTTTCTGACAGCTCAAAGGGACTTACTGTGATTTAAGGAGTGAATCTTTATCAGTAGTTGACAGGCAGAAAAAATGATAAGGCCATACAAACAGTTATTTATAATAGTATTTAGCTGGAAAGTGGCAATCACTCAGTATATGATTTATGTAATTTTTCAGGGCAGTAGATATACCTTCTGCAGTCCATCGGGCACTTCATATAAGCCTGCTTCTGAAGCATGAAAGCTTGCCTGCTCATTGCAGAAAGAGCAAGATAAATGCAAAACTGGATACAGCTGTGTAGCAGATAGTGTAATTGGAGATTCTTGTCCTGTTT ...:.:x:.::....x.:..x:....xx:.x.---..x....:..--..x:..:.:.:x....x...xxx:...x.:....-......x...:xxx..:---..x:.:....x..:x--..:.....x...-....:::...........:..x........x:.::..:.x...:x:........:......:.----.......x.......:x.:::........:.x:x.......:.............:.:x.....:..xx...........::..:x:...x.........:.x..x.:.x:..::.....xxx:x....:x.x.....xx.:.::x:::x..-...x:x...x:..x.::......::x.:.x.x:.x.xx.:.x.:x..x:.x.:-.......:..xx::.x.:..:.....:...x:.------x...x.....:..x.:..x... 32M3D10M2I34M1I17M3I15M2D12M1I63M4I152M1I53M1I33M6I22M 292/443 65.9% 462/94230402 0.0% 24/443 5.4% 53606970 NA +10093 chr4 + 190214555 90542360 90542359 90542649 290 CGCTCAGCAGGAGGAAAGTGAGAAGTACACTTATTCTAGTCAGGCTCAGAGA---TGTTATTCTTTTTCTGTTGTT---------GCTATGG--GATAAC-ATTGCATCAATAACAGGAAAGCGATCCAACTAAGCTTCATGCACCGCAATCAAGTTGTTTTGATGCAAATAAGGTTCAGTCACTTAGGGTACTCAGTTATGACAAACTGTGCTAACAAACTATAAATCAAACCTGAGCTGAATTGCAAGTGTAT-ATGCTAGATAAAAAAGAGGAAAAGCTTTTATCTTT--TAGTAGACTTAAGAG chr4 + 94230402 36930330 36930329 36930630 36930330 36930329 36930630 301 CACATAGCAAGAAGAAAGTGAGAAGTGCATGTATTCCAGTGAAGCTTATAGACACTGTACTTCCTTTTCTTTTCCTCCTCCCCCTGCCATTGCTGATAATGATTGTATCAGTGATAGGAAAGCTATCAAGTTAAACCTCATGCACAATAATGAAGTTGTTTTGATGCAAATAGGGCTCAGTTGCTTTAGTTTCTCATTTGTGACAATCTTCAGTAAC--CTGATAAATCAAATTGAAGCTGGAAAGC-AGTGTACAAAGCAAGTTAAAGAAGTAGA----CTTCCTTCTTGTATAGTAGCCTTGAGGG .:.x:....:..:.............:..:x.....:...x.:...:.x...---...xx...:......x..x:.---------..:..x.--.....:-....:....:.:.:........x...x.::...:.:........x::...x....................:..:.....::...x:.x.x....x..:......x..x::x....--x:x..........::x:.....:.xx..-......:-.x..x..x....:...x:..----...::x....x--......x...:..:. 52M3I21M9I7M2I6M1I116M2D28M1D7M1I20M4D11M2I15M 208/283 73.5% 301/94230402 0.0% 25/283 8.8% 53612030 NA +3165 chr4 + 190214555 90548678 90548677 90548861 184 AGAAAAGTTAGTTACAATAACATCTTATAAGCAAGGTTTATCATTTAAAGATATATATATATATATATATATACACACACACACAGA----CATATATACACACACATACACACACATACTAGCATATTCTTTATCAATAAGTGATTA-------CTCTGTACTATTTTCAAACTTCAGAATATCAAAGTTCAAA chr4 + 94230402 61270737 61270736 61270922 61270737 61270736 61270922 186 AGAAATGTGGGTTGCAAGAGC---TTA-AGGCGA----TAACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA-GCAAAATGGTGCATTCAGCAGGAATGAGAGAACAGCAGTATATTTGGAGAAATGCCAAATTCTATAATACTGAAAATTAAA .....x..x:...:...x.:.---...-.:..:.----..x..x::.x::......x.:.......:.......:...::.......----...:....x::.....xx::..-:..x.x.:.:::....xx:.xx...:..x..x:.-------x.:..x.xx.x.x:....:.::.x....:::..:x.:... 21M3D3M1D6M4D49M4I22M1D34M7I40M 112/175 64.0% 186/94230402 0.0% 20/175 11.4% 29277941 NA +3465 chr4 + 190214555 90548722 90548721 90548808 87 TTAAAGATATATATATATATATATATATACACACACACACAGACATATA------TACACACACATACACACACATACTAGCATATTCTTTAT chr4 + 94230402 54005684 54005683 54005776 54005684 54005683 54005776 93 TTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTAT ..:..x.:....:...x........:.................x..x.:------.:....x.x.xx:...:.::..:x..:..xxx...... 49M6I38M 63/87 72.4% 93/94230402 0.0% 6/87 6.9% 36543038 NA +3122 chr4 + 190214555 90548738 90548737 90548790 53 ATATATATATATACACACACACACAGACATATATACACACACATACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.......:x:.:::......:........:.:......... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 67301016 NA +3037 chr4 + 190214555 90551675 90551674 90551729 55 TAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATGT chr4 + 94230402 81889430 81889429 81889484 81889430 81889429 81889484 55 TAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACAT ....:x..:......:.:x......:......:......x.x...:...:..::. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 8662245 NA +3117 chr4 + 190214555 90551678 90551677 90551726 49 TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618359 4618358 4618407 4618359 4618358 4618407 49 TTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ..x.......::..............x:....::......x.x...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 85933319 NA +7037 chr4 + 190214555 90561294 90561293 90561593 300 TCTGTCCAAGAATGAAATAGCTTATTTATGGATCC---------ATTCATTGGTTTATGGATCCAGGGTGCCCTGGAGAACACCACAAATCTTCGTGACATCCC-AAGTGTTAACTTTAATGTTTATATCTTTAATTTAGCTGAAAGATGTGTAAAATCTCATATAGTCAAATAGCTCCCTCTTGACTGAACATATAAAA----TTGGGATTAAAGCATGCTGTTCCAATAGATATCAATCATAACTTATGCTCAATAATTTATTTTTGAATCTAC-ATTTTAAGATCGCACAATGTTAAGGAGCAATTGATTTT chr4 + 94230402 36951745 36951744 36952046 36951745 36951744 36952046 302 TCTGTCAGAGA-TGGAGTGGTGT---TATGGATCAGTGTAATTGATGCATTGGTTTATATACCCAAAGTCCTTTAGAGGGTGCCACAAATATTTATGAAGTCTTTGAGCATTTAATTTTACACC-AGATCTGTAAATTAACTGAAAGATGTGTAAAAATTCATACAGTGAGACAGCTCCCTCCTGGCTACATACACGAAGTGCCTCAGG---AGCGTAAATTATTTCTGCTGAGGTCAATCTTAATTTATGC----TATTTTGCCTCCGCATCTGCTATTCCGAGGAAGAAGAATA-TAAAGAACATTTGCATTT ......x:...-..:.:.:.:x.---........x---------..x...........:x.:...::..x.::.:...::::........x..::...x:..::-:..::..x.x...x.::::-.x....x...x...:.................x:.....:...x.:.:.........:..:..:x.:.:.::..:----.::..---.:x.:.x::.:..:.x::x..x:......x...:......----..x...:::.::.x....:.-...:::..:xx.x.x...:-...:..:..x...xx... 11M1D11M3D9M9I60M1I19M1D75M4I5M3D40M4D20M1I19M1D18M 189/287 65.9% 302/94230402 0.0% 28/287 9.8% 53609549 NA +5221 chr4 + 190214555 90561325 90561324 90561471 147 ATCCATTCATTGGTTTATGGATCCAGGGTGCCCTGGAGAACACCACAAATCTTCGTGACATCCCAAGTGTTAACTTTAATGTTTATATCTTTAATTTAGCTGAAAGATGTGTAAAATCTCATATAGTCAAATAGCTCCCTCTTGACT chr4 + 94230402 41573693 41573692 41573822 41573693 41573692 41573822 130 ATCCATTCATGGTTTTATGGACCCAGTGCTCTCTAGAGATCATC-----------------CCTGAGTGCTGGATTTTACATTTAGATTGCTGAGTTAGCTGAAATACGTGTAATATCACCAGTAGGCAAAGAGATCCCTATTGACT ..........x.x........:....x.:x.:..:....x..:.-----------------..::....:.::x...x.::....x..:x:.:.x..........x.:......x...x.xx:...x....x..x.....x...... 44M17D86M 94/130 72.3% 130/94230402 0.0% 17/130 13.1% 48987632 NA +3163 chr4 + 190214555 90580263 90580262 90580343 81 AGGTTCTCCTCCTTACTAATTATGTGACTTCAGGAAAGTCATTTTGCCTTTCTATACCTTGATTTCCTCATGTATAAAATG chr4 + 94230402 79037093 79037092 79037173 79037093 79037092 79037173 81 AAATTTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATG .::..:.x:.:..x..x.::.:.:....:.:...:....:.....:::.x...:x:::.::...:.::..x.......... 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 11543170 NA +3058 chr4 + 190214555 90610124 90610123 90610182 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 14576918 NA +12763 chr4 + 190214555 90627989 90627988 90628283 295 CACTGTAATTTTTGTTCTTTTTTTTTTTCTTGTTAGGAATCTTTCCCTGAAATTAACAAAGGACGTTGATCAAG---AAGCCAGGTGTTCCCACATCAGCCGAATGCCCAACAGTCCATCTGCGGATTGGCCTCTACAAGGTGTGGAAGAAAACGGAGGCATAGATTCTCTGCCATTCAGACTGATGTTACAGGACTGCACGGCAGTCAAGACGTTATTATTAAAGATGAAGAGAGTTCTTCAAGAGGTAATGGTTTCCTC-----TAAGATTAATGTCCTTCAGTGCTGGTAGACAATGAAG chr4 + 94230402 36983535 36983534 36983837 36983535 36983534 36983837 303 CATTTCAGTGTTGATCTTTCTATTTTCTCTTTTAAGGAACCTCTCTTTGAAACTGTCGAAGGAGGTAGAACAAGGAGAAGCCAGGTACCCCCGTATTAGCCAGCTGGCTGGCAGCCCATCCGTGGAGTGGCCTTTTACTGGTCTGGAAGAAGGCGGAGGCATTGAATCTTTGCCCTTCAGACTGATGCTGCAAGATTGCACAGCTGTAAAGACATTGCTACTGAAAATGAAGAGGGTTCTTCAGGAGGTAATTGCCCACTCATTTGTTAAATTAATAGCTTTCTGCATTAATGAGCTAAGCAG ..:.x:.:.x..x:.::..:.x....:....x.x.....:..:..::.....:.:x.:.....x..x..x....---.........:::...::..:....::x..x.:::...:.....:.:...x......:.xxxx...x........::.........x..x...:....x............:.:..:..:.....:..x..x.....:..::..:.:..:........:........:........x.:::x...-----.x.:......:x.:...x.:::.::.:::.x.x.x.. 74M3I184M5I37M 204/295 69.2% 303/94230402 0.0% 8/295 2.7% 53644454 NA +3106 chr4 + 190214555 90642857 90642856 90642922 66 AAATAAATACATACATACATACATGCATTATTTTCTGTTTTTTTTTTTTTTAAAGTAAAAGTGCTC chr4 + 94230402 29568801 29568800 29568865 29568801 29568800 29568865 65 AAATAAATACATGCATACATACATTGGCAGCTTTGTGGGTTTTTTTTGTTTAAAA-AAAAATGTTC ............:...........xx::x::...x..xx........x......:-....:..:.. 55M1D10M 50/65 76.9% 65/94230402 0.0% 1/65 1.5% 61074056 NA +3267 chr4 + 190214555 90648225 90648224 90648287 63 AAAGACAAAATGAGAGGAATAA--AGGAAAAAAAGAAGAAAGAAAGAGAGAGAGAAAGAAAGGAA chr4 + 94230402 76841607 76841606 76841671 76841607 76841606 76841671 65 AGAGAATACATGAGGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGA .:...xx.x.....::::....--...:........:..:...............xx......:. 22M2I41M 49/63 77.8% 65/94230402 0.0% 2/63 3.2% 13806618 NA +3153 chr4 + 190214555 90648240 90648239 90648313 74 GGAATAAAGGAAAAAAAGAAGAAAGAAAGAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 73002047 73002046 73002120 73002047 73002046 73002120 74 GAGACAAATGAAAAAATGAAGGAGGAAAAAGAGAGAGAAAGAAAGTACATCATTAAGAGCTGAAAGACTGAGAG .::.:...x.......x....:.:....:................x.x.xx.xx..:::xx......xx..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 17646193 NA +3111 chr4 + 190214555 90648244 90648243 90648383 140 TAAAGGAAAAAAAGAAGAAAGAAAGAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGTTGCCCTCAAGAAAGAAGTATACAAGTTCCTGGTATTC chr4 + 94230402 53255532 53255531 53255670 53255532 53255531 53255670 139 TAAAGGAGAAAAAGGAGAAAGGAAGAGAAGGGGAAGAAAACAGCACTGAACAAGAAACAAACAGACAAATATTAACAATAATTGGGAAAAGCAGTTGAACAGATA-TCTCGGGAGATAGGAAAATATCTTCTTGGCTCTC .......:......:......:......::.:...::...x::x.xx:.:x......x...x.:.x...x.xx:.x.:x..xx::....::x..xx::.x..x.:-:...::..:.x.:.x.x.:.xx...:...:x:.. 105M1D34M 82/139 59.0% 139/94230402 0.0% 1/139 0.7% 37392712 NA +3178 chr4 + 190214555 90648245 90648244 90648389 145 AAAGGAAAAAAAGAAGAAAGAAAGAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGTTGCCCTCAAGAAAGAAGTATAC----AAGTTCCTGGTATTCAAAAAA chr4 + 94230402 89572266 89572265 89572414 89572266 89572265 89572414 149 AACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGATTAAAAATCTGAAGTTGGAGGGAGGCAATCAAATCAAATAAGGGAATTTAGTTTAATCAAGACATACATATTAAAGTACCCAGTTTAAAATAAA ..x:........:..:.....:.........:x.:x.....x.x:.x.:...x:.xx...:.xxx:...xx:..::..::x..xx...xx..:x...:..:..xxx:.:..xx....x:..:.:----....x..::..x.xx..x... 124M4I21M 88/145 60.7% 149/94230402 0.0% 4/145 2.8% 1075979 NA +3235 chr4 + 190214555 90675590 90675589 90675724 135 TGAAAACTTTGTTAACACACATGATCT--AAAATTTAT-ATAGTATGTGTGTTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATG------TGTTTTTTTTTTTTTTTT chr4 + 94230402 69155102 69155101 69155234 69155102 69155101 69155234 133 TAAAATATTTCTTAATATGAGTGGTTTTTAACATTTATTATACTGTTTGA-----------TTGTTTTTGTTTGTTTGCTTTTGTGTTGGATGGGTGTTTTTTTTTTTTTTTTTTTGCAGTTAAACTGTCTTTTTATTATTATT .:...xx...x....:.::x:..:.:.--..x......-...x.:.x..x-----------..x.....x...x...x:.....xx....:.x....x..................xxx.------...:.....x..x..x.. 27M2I9M1I11M11D59M6I18M 91/124 73.4% 133/94230402 0.0% 20/124 16.1% 21520488 NA +3424 chr4 + 190214555 90675618 90675617 90675729 112 AAATTTATATAGTATGTGTGTTTTT-ATCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 68083542 68083541 68083654 68083542 68083541 68083654 113 AAATTCTTTTGGGATGCATTTTTTTTCTCTGAGGTTGTTGTTTGGTTGGTTGTTGTTTGGGTGGCTGCTTTTTTGTTGTTGTTTTTTCTGTCTTTTTTTTAGATTTTTTTTTT .....:x.x.:.x...::.x.....-x...xxxx..x..x...xx..xx..x.x.:......x.x..x......x..x..x......x...x........xxx.......... 25M1I87M 79/112 70.5% 113/94230402 0.0% 1/112 0.9% 22592076 NA +3371 chr4 + 190214555 90675627 90675626 90675730 104 TAGTATGTGTG---TTTTTATCTTTTTTTTTT---TTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9621585 9621584 9621694 9621585 9621584 9621694 110 TAATATGTCTGAGTTTTGGATTTGTCTCTTTTAGATGTTTTTTGTTTTTGGTGTGGTGGTGTGGATTTTTTTGGCTTTTTTTCTTGGCTTTTTTTTTTCTTCCTATCTCT ..:.....x..---...xx..:.x.:.:....---.x......x.......:x...xxxx....x.......xx:.......:x..xx..........:..::.x.:.:. 11M3I18M3I75M 74/104 71.2% 110/94230402 0.0% 6/104 5.8% 81054042 NA +3295 chr4 + 190214555 90675644 90675643 90675725 82 TCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTT chr4 + 94230402 47342172 47342171 47342253 47342172 47342171 47342253 82 TCTTTTGGCTTTTTTTTTTTCCCTGGGGGGAGGGGGGCTGGTTGGTTTTTTTTTTTTTTCCTGTTGTTTTATTTTGCTTTTT ......xx:...........:::.xx..xxx...xx.x.....xx..............:x...xx....x....x:..... 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 43333472 NA +3064 chr4 + 190214555 90675648 90675647 90675705 58 TTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTAT chr4 + 94230402 49823049 49823048 49823106 49823049 49823048 49823106 58 TTTTTTTTTTTTCTTTTCTGTTGTTCATGGTTTGTGGGTTGTTTTTTTTTTTTTCAAT ............:....:.x...x::xx....x....x..x.............:x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 40852599 NA +3302 chr4 + 190214555 90692026 90692025 90692161 136 TCAATGTGTGTATATATATATATATATATATATATATATATATATGAT------------------AAATACCAGACACA--------TTTATAGAGCTCTTATGATCATAAAATCTCTTATTTATGAAGGTATTTCTCATTCACA-----AATCTCATTATAAAGT chr4 + 94230402 9891164 9891163 9891322 9891164 9891163 9891322 159 TCAGTGTGTGTTTATATATCTATATACCTATATATGTATATCCATGATCATTTCTATCAATAATTCAAATTCCAGAAATGTCCAAAGCTTTGCAGAACTTTAGTAGAGATAA--------ACAGAAGGAGATATTTTTAATTCATATCCATATTCCCTCCATAAAGT ...:.......x.......x......:x.......:.....x:.....------------------....x.....x.::--------...::...:..:.x:.::xx....--------.:xx.x.:..:.....:.x.....:.-----.x..:.x::....... 48M18I14M8I24M8D26M5I16M 92/128 71.9% 159/94230402 0.0% 39/128 30.5% 80800862 NA +3150 chr4 + 190214555 90693861 90693860 90693954 94 AGGAAAAGAAGAAAGAGAGAAAGAAAGAAGAAAGAGAAAGAAAGAAGAAAGAGGAGGAGAGAGAGAGGGGAAAGAAGAAGTGGGGAGGAAAAAT chr4 + 94230402 49044718 49044717 49044811 49044718 49044717 49044811 94 AGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAAT ..x:.:.:.:.:.....xx...............:x:..:..x...::..:..:.:..:x..::x..:::.xx..::xx:x.::....:..... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 41649143 NA +3077 chr4 + 190214555 90693869 90693868 90693939 71 AAGAAAGAGAGAAAGAAAGAAGAAAGAGAAAGAAAGAAGAAAGAGGAGGAGAGAGAGAGGGGAAAGAAGAA chr4 + 94230402 38078781 38078780 38078851 38078781 38078780 38078851 71 AAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAA ......:..:...........:..:.:.......x.x.:::::.xx:xx.x.....:.:x.....:..:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 52615088 NA +3393 chr4 + 190214555 90698944 90698943 90699058 115 ATAAAAAAATTAACCAGGGTGGTGGTGTGCACCTGTAGTCCCAGCTACTCAGGAGACTGAGGTGGGAGGATCGCTTGAGCTCAAGAGGTTGAGGGTGCAGTGAGCCATGATCCCA chr4 + 94230402 76033183 76033182 76033289 76033183 76033182 76033289 107 ATGAAAGGATGATACACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA ..:...::..x.xx..x:......-----...x......:.........::::..:.....x:xx.x.:.x.:.....:.:..::..x..x:..x..:..---:x......x... 24M5D71M3D12M 72/107 67.3% 107/94230402 0.0% 8/107 7.5% 14665761 NA +3067 chr4 + 190214555 90710251 90710250 90710307 57 TTCATTCTAGTGATAGTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTT chr4 + 94230402 90203125 90203124 90203181 90203125 90203124 90203181 57 TTCACTGAATTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTT ....:.xx.x...x..x.....x..............x....x...x....x..... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 507126 NA +3423 chr4 + 190214555 90710260 90710259 90710302 43 GTGATAGTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTG chr4 + 94230402 7933827 7933826 7933869 7933827 7933826 7933869 43 GCAATAGTTTATTGTTGTTGTTGTCGTTTTTTGTTTTGTTTTG .::.......x.............:.................. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 82776433 NA +3050 chr4 + 190214555 90710267 90710266 90710360 94 TTTTTTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTGCTGTGCAGCAGTTCTTTAGTTTAATTACATCTCATTGGTCAATTTTTGCTT chr4 + 94230402 43922896 43922895 43922989 43922896 43922895 43922989 94 TTATTTATTGTTGTTGTTGTTTGTTTATTTTCCTACTTATCAGCTATACAGTCTCTTCTTTTTTTAATCCAAACTCATTAGTCTACATTTATTT ..x...:...............x..xx...x::.xx..x.:x...:.:...:xx:.::..xx......:xx.x......:...x.:x...::.. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 46787371 NA +3262 chr4 + 190214555 90710268 90710267 90710308 41 TTTTTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTT chr4 + 94230402 63215013 63215012 63215053 63215013 63215012 63215053 41 TCTTTGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTTTT .:.........x........x.................... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 27495255 NA +3300 chr4 + 190214555 90710268 90710267 90710311 44 TTTTTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTGCT chr4 + 94230402 50433365 50433364 50433408 50433365 50433364 50433408 44 TTTTTATTGTTGTTGCTGGTTTTTGTTTTGTTTTGTTTGTTGTT .....:.........:..x...................x...:. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 40276903 NA +3175 chr4 + 190214555 90717714 90717713 90717773 60 ATGTATGTGTGTTTATATATATATATACACATATATATATATACACACATATATAGTGTA chr4 + 94230402 55049678 55049677 55049735 55049678 55049677 55049735 58 ACGTATGTGTGTTCACATATATATACACCCATGTGTATACATGGTCAC--ACATAGTGTA .:...........:.:.........:..x...:.:....:..:xx...--.:........ 48M2D10M 46/58 79.3% 58/94230402 0.0% 2/58 3.4% 35668036 NA +3393 chr4 + 190214555 90717740 90717739 90717827 88 ACACATATATATATATACACACATATATAGTGTATATATATGTGTGTATATATATATA------TGTGTATATATATGAGAGATGTTTTTCTGT chr4 + 94230402 29870187 29870186 29870274 29870187 29870186 29870274 88 ACACATGAAC-TATATTCACACATGAATAGTTTATATATGTGTGTGTGTATATATATGGACTGCTATGAACACATATTA-----ATTTTTTTGT ......:x.:-.....x.......:x.....x.......:.......:.........:------.:..x.:.:....x.-----:.....:... 10M1D47M6I15M5D10M 65/82 79.3% 88/94230402 0.0% 12/82 14.6% 60847553 NA +6502 chr4 + 190214555 90723905 90723904 90723994 90 TCCTTGCAGAGTGCAGACATGAGTCCAGCAAGCAGTACCACGTCACTTCCTGTTAGTCCTCTTACTGAAGAGCCAGTGCCTTTCAAGGTA chr4 + 94230402 37034663 37034662 37034752 37034663 37034662 37034752 90 TTCTTTCAGAGTACAGACATGAGTCCAGCTAGCAGCACCACCTCACTCCCTGTTAGCCCTCTTCCTGAAGAGCCATTACTTTTTAAGGTA .:...x......:................x.....:.....x.....:........:......x...........x.:.:...:...... 90M 77/90 85.6% 90/94230402 0.0% 0/90 0.0% 53689242 NA +5324 chr4 + 190214555 90766657 90766656 90766954 298 ATAAGCAAAATTACCTTGTCATTATG---TGATGCCATCTGGTATTGAAATTGAATTTTATTCACACACATAATTTAATACAGTTTTTTAAAAATTTCTG--GATTCCTTCTCTATATTCACACATTTTGGCAATAACT--CATACAT----ATTTTCTCTCCATTGATACAGAAGTAGGGACACTGTAAAGATATAAAACATATATGACATCTAAGAACCCTTAATATTTGTTCACTA---GAGCTCATACGAGATGTGATCTATACTCTGTAGTTT-GGAGAGCTAAAGCAATTCATAACTACTTTAGCAC chr4 + 94230402 37055664 37055663 37055945 37055664 37055663 37055945 282 ATAGACAATATGTTTTTGTCAGTAAAAAATAATACCATCTGGTATTTACTTTCAATTTT-----TATATGAAGCTTAAA-----TTTTTATTATTTTCTGTCAAATCTGCCTCAAGATATACATATCTCTCTGTTAAATTACATTCATTATGATTATCATTCTGTTGATACAGAAATAGGTACAATATAAAGTTATAAAACATTTATGAAATC-------------------TTCACTACCTAGGCTGATTTGAAA--TGATCTATCGTTTCTGTCTGAGGAGAATGAGCACAATGCATGGCTATTTTAAGAC ...::...x..xx::......x..x:---.:..:............x.xx..x......-----:.:.::x.::....x-----......xx.x......--:.x..:x:...x.x..x:...:..:.:xx::x...x.--...x...----...x..x:..::...........:....x...x.:.....x..........x.....x...-------------------.......---::...x..x:..:.--........xx.:.x.:x:.x-.....::x.:x:....x...::...:....:x.. 26M3I30M5D15M5D16M2I37M2I7M4I61M19D7M3I14M2D20M1I34M 183/267 68.5% 282/94230402 0.0% 46/267 17.2% 53710993 NA +3227 chr4 + 190214555 90771563 90771562 90771642 80 ACTAAAAAAAAAAAAAAA--AAGAAAAGAAAAAAATGCATATTTTTGTAGAAAGTGAGATACTATTTTTATTACAAACAACT chr4 + 94230402 84541717 84541716 84541798 84541717 84541716 84541798 82 ACCAAAGGAAAAAGAGAAGCAAGACAGGAAGAAAGTAAATACTACTGTACAACTTGAGACAAGATTTTCATTACAATCTACT ..:...::.....:.:..--....x.:...:...:.:x...:.x:....x..xx.....:.xx.....:.......x.x... 18M2I62M 57/80 71.2% 82/94230402 0.0% 2/80 2.5% 6229846 NA +18603 chr4 + 190214555 90774428 90774427 90774872 445 AGTTAGTTACTAACATTTTCATGATAATATAATGAGTCATAGAAAATTTGCATTGAGATTTATT----GAATAAACTTGACATATT--------TAAA-------CTGTT------TGCCATAATTATGAGCCTAGTACCTG-TATGCCACAACAGTATTTTAAAGTACTGTACTTTGCACCTTCTTCACTAAGAATTG------------------------------ATCTGATAAATCCCTTTTTGCTAGATTGTGTCATGTCCATC-TTTTTAATACCTTCCTTGTTCATTATTAAGTGCTGTTAGCCATACTGTCTAATGAAAGGTACATAATATCAACTCTGATTACTGCTGTAATGTTTTCCAGGCATGCTTGGTGATGAGCCTGGCATATGAAACAATTTCCTACAGTAATAAAACTAATTAAAGTAGGCAGTCATCCACACAACACTTCCTAATGAATTATAATAAGCTCATTAATCTCATCTGTTCTTATTC chr4 + 94230402 37062771 37062770 37063260 37062771 37062770 37063260 490 AGTTACCAATTAACATTTTCATTAGAATATT-TGAGTCATAGTTAGTTTTCACTAAAATTTATTATCTGAGTAAACCTGACCTATTAATCCTTCTAAATCTATTACTGTCAGCTAATGTCATGATTACAGGGAGAGTACATGATGTGCCATAGCAACAC----AGCTGCTCTATTTT---TTTTTTTAACTTAAGATTGCTATTGTGCTGTTTATCACTGGATTATCAGACATGATAAATTACTTTATGCTAGCCCCTTTCATATCCATCCTTTTTAATACCTTACTTGT-CATTAT-AAGAGTCTTTAGCCTTATAGAGTAATGAAAGGTTCTTG-TCTCAAGCCTGATTACTACTCTAATGTTTTCCAGGCATGCTTGGTGATGAGTTTGGCATATGAAACAATTTCCTACAGTAATAAAACTAATTAAAGTGGGCAGTCATCCTCACATCACTCTTTAATGAATTATAATGAGCTCATTAATCT-ACCCATTCTCACTC .....x:x.:............x.x.....x-..........xx.:...x..:.:.:.......----..:.....:....x....--------....-------....:------..:...:....:::.xxx.....x..-.:.....:.:..::.:----.:x.:..x..:...---::..:..x...x.::....------------------------------.:x........:x....x......x::x.x....:......-.............x.....-......-...x.::x......x..:x.xx...........x.x.:-.x....x:.........:..x..............................::............................................:...........x....x....:::..............:.............-.:.::....:.:.. 31M1D32M4I18M8I4M7I5M6I26M1I16M4D14M3D19M30I41M1I19M1D6M1D38M1D150M1D14M 345/433 79.7% 490/94230402 0.0% 69/433 15.9% 53711657 NA +3090 chr4 + 190214555 90795158 90795157 90795229 72 GCACCTGTAATCCCAACTACTCGGGAGACTGAGGCAGAAGAATCACTTGAAACCAGAAAGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...:.....:.::..:.....x.xx:x...x........x......:x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 14761952 NA +3073 chr4 + 190214555 90811897 90811896 90811952 56 TGGAATATATATATACACACACACACACACACACACACATATATACACTTAATAAA chr4 + 94230402 91043340 91043339 91043395 91043340 91043339 91043395 56 TGAAATGCATGTAGTGACACACACACACACACACATATATATTTAAGCTTAATTAA ..:...::..:..xxx...................:.:....x..x:......x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -231443 -93998959 +3142 chr4 + 190214555 90811897 90811896 90811943 47 TGGAATATATATATACACACACACACACACACACACACATATATACA chr4 + 94230402 46140852 46140851 46140898 46140852 46140851 46140898 47 TGTAATATATATACACACACTCTCACATACACACACGTGTATATACA ..x..........:......x.x....:........:::........ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44671045 NA +3057 chr4 + 190214555 90811903 90811902 90811958 56 ATATATATACACACACACACACACACACACACATATATACACTTAATAAACTCACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATAC-----AGACTTACA ................x.x....:........:.:....:..-----.:...:... 42M5D9M 43/51 84.3% 51/94230402 0.0% 5/51 9.8% 44671047 NA +12964 chr4 + 190214555 90815577 90815576 90815926 350 TTTTTGGATACATTAACTTATTTTT--TGCAACTA-AGAATATATTATGAAAAATAT--CATACTATAGAGGGAATTTGAGTTTCGTTAGTCAGATGCAATTATCTCCCACTGTGTGAAGCTGACTTTCCTTATCAAGAGCAAAGTAAAAGGGCTAAGCCTATTATGCTGTCTCTTT-GATGTTTTTATAGGATATAATGAAAGATGAATGCTCGATGCTCAAGCTGCAGCTGAAAGAGAAGGATGAACTCATTTCCCAACTTCAGGAAGAGCTGGTAAGTGATAACAA-TGCTTGGCCCACGAGTGTACTTTACTTTCAAGGTTATTTGTTCCACGCCCTTATTTATTAACACCAA chr4 + 94230402 37073832 37073831 37074173 37073832 37073831 37074173 342 TCTTTGCATGCATTAATTTGTTTATGCTGCAACTTTAGAATGTGTTATTGAAACTACAACACATGACAAAAGAGAATTGAGTTTCATTACTTTAATGTAACAATCTCACACTACGTGAAACAGCCTTTTCAAGTCAAGACCGAAGTAAAAGCATGAAACCTGTTTTAACATCTTTTTTGATATTTTTGTAGGATGGAATAAAAGATGAATGCTCAGTGCTGAAGCTGCAGCTGAAGGAGAGAGATGAACTCATAGCCCAACTTCGTGAGGAACTGGTAAGCAAGAGAAACTGCTTTGAAAAAAA---------------AAGTTTGTTTGCCTAATAATGTCATTCACCAATACCAA .:....x..:......:..:...x.--.......x-.....:.:....x:...x..:--..:.:x.:.:.:.::.x.........:...x.:x:...:..:x.....x....::.....:.x.x....:.xx:......x.:.........x::x..:...:..x.:x::...:...-...:.....:......:x...:..............::....x..............:....::...........xx.........:x..:..:........::.x.:x..-.....x.xxx.x:.---------------...x..:....:::x.::x:x.:...:.::..:..... 25M2I8M1I21M2I118M1I111M1I14M15D38M 237/335 70.7% 342/94230402 0.0% 22/335 6.6% 53741745 NA +27624 chr4 + 190214555 90824534 90824533 90825167 634 TACTTTCAGAATTCAAATTGAATAAAATGGTATGCCCTTGATACTTTAA--TAACAGAATAATTCCTGCATGATAAGAGAAACATTCTTTGTGC--ATGAAAA----------TCATATCATGAATTTATCTTAAAAGTAATTCCCCACTTGCTCTACATTCTATTATAATTTATGGTATTATTTCATGCTAGTCATTTTAGAATAGAATATTACAGCTCCATGGATGATTTACATAGAAATGGACAGCTGTAAGTACTTTCAAATCCTCTTTCTTTTTCATATTTAGGAAACATTACGAACAGAAAAGTAATAGATTAGGTATACTTAAACATTATTAAAGTGTCAGGCTACTTTCCTTCTTTTTTCAGGAGAATTAATTGCATATATTCCAGAAAAGGCTTATCTCAGCAGTAATTACTCTCCTAGTCAGCTCTGTAAGACAGATGTAGAGTGTGAATGTGACAGTATCCTATGATACATAATGGGGACT-GCCTCCAGTTTCTTACACACTCCAGTACCCTGATGAAGAGCTGCCAAAAAGATACAATCTTTAATATTCAATGGAATTTGCTGTAGCAATAGTACATATTTGTTAAAGTCTTTATCACAAAGGGTTGTTATATTGCAGTAC--AGCATGGATATAAGA chr4 + 94230402 37077016 37077015 37077649 37077016 37077015 37077649 634 TATTTTCAAAACTTTAA---AATAAGTTTGT--------GAAATTTTAAAGGACTAAGGTAGTTCTTATTTGGAAAGAATTGC---CTTTATGCTTATGAAAAAAAAAAGAAGTAACATTCTAGATTCATCTTTACACTGGTTACCCACTTGCTCTA-GCCCTGTGG--GTCTACAGTATTATTTCATGTTGGCTATTTTATGATGGGCTATTACATACTCATGGATAATTTACATAAGAGCAGACAGTTGTAAGTACTTTTGAATCTTTTTTCTTTGACATATTTAGGAAATATTAGGAGCAGAAAAGGAATAGATTAGGTGTACTTAAACATTATTAAAGTGTCAGGTTTCTTTCCTACTTTTTACAGGAGAATTAATTGTGTATGTTCCAGAAAAGGCTTATCTCTGTGGTAATTACTCCGTGAATCAGTTCCACAAGGCAGACACAAAGTACGAAAGTGGCAATATCCTATGGTACACAATGGGGATTAGCCTCTGGTTCCTCATCTATGTCAGTCCCTTGATGAGAACCTGCCAGTAGGATAACATCTTTAATATTCCTTGGCACTTGAGAAGATGATTCTGCATATTAGTTTAAGCCCTTATCACAAACCATTGTCATATTGTGGTGCTTGGCATAGATAAATGA ..:.....:..:.:x..---.....:x.x..--------..x.:.....--x.x:.:::..:...:.::x..:x....:xx:.---....:...--.......----------.x.:..:x.::...:.....x.x.x.::..x.............-:::..:.x:--:.:..::.............:.:.::......x:..:.:x.......xx::.......:.........::.:::.....:............::....:.:.......xx.............:....x..:........x............:..........................:.x.......x......x...............::...:....................x.::..........:x:x.:....:..:::...:....:::.:...::...x...:..:.........:....:........:.-.....::...:..:.:x:.:x:....x..:......::.x......:x.:....xx.............xx...x.:...xx:x::::..xx.:......x...x...:.:..........xx:....:......::..:.--:....:....x.x.. 17M3D11M8D10M2I32M3D8M2I7M10I44M1D9M2D323M1I141M2I15M 453/617 73.4% 634/94230402 0.0% 34/617 5.5% 53747518 NA +3043 chr4 + 190214555 90825703 90825702 90825748 46 TTTTTTGTTTGTTTTGTTTTTGTTGTTGCTTTTTTTTTTTTTTTTT chr4 + 94230402 67329073 67329072 67329118 67329073 67329072 67329118 46 TCTGTTGTTGGTTTTGTTGTTGTTGTCGGCTTTTTTTTTTTTTTTT .:.x.....x........x.......:.x:................ 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 23496630 NA +3113 chr4 + 190214555 90863674 90863673 90863750 77 AATCAGAAAAAAAGAAAGAAGGAAGAAAAAAGCAAAAAGGCAAAGAAAGAAAGGAGACAAAGAAAG-CAAGGGAGGAA chr4 + 94230402 75176443 75176442 75176519 75176443 75176442 75176519 77 AAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAA-AGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ..x....:.....:....:......x.....x...:..::-.:..:..x:...:.:x:..x..::.-.....:..... 40M1D25M1I11M 55/76 72.4% 77/94230402 0.0% 2/76 2.6% 15687231 NA +19811 chr4 + 190214555 90875297 90875296 90875934 638 ATGAGAAATTTGATAAA----CTGAGTTGAGCCTCATGGTTAATGACATTTCCAAATTTTAGAATATCCATAAATAATGGAGGAACTT-ATTATAAACAATAGGGGATAAAACAAAGAACCTCTCTTCTGACACATGAGAACAAATGACTTCACATCTCATCTATTT-TTAGAGAATGATGTTGAAGTCTATTCATTTATCCTCTGTTATTCAT-TTTTGGATAAATAATGATGCTCTTTTAAAACCTGAAGTCCAAATGCCTTAA---------------TACAATAAGATATGT---------------GACATTTTATAGGCATTTTGTAACAAGTCTTGCATGTCACTATAGTGCGGTTACATACAATATCAATTATTCCCTAAGGTATTATATAGTTGTAGATCATAAACTTATAGCTTAAATTAAACATCACAGCTGGTTGCTTTAATTTGATGCATTATGCCACAAATGTTTCAACAGCTTGACTAAGATGAGCCATACTGCCGATTCAAAAGAAGAGCGAAGGTCAATGCACAGGAAGCCTAGTCATTTGCAGATTTTCTTTGAGAATATTAAAAAG-------CATTCTGCAGAATATAGTTAAATGGAATATAACCAAACAAAATTAAAGAAAACAGAGCAGACTATTGCGATGGTGTTTCACTTATAAAAA chr4 + 94230402 37094391 37094390 37095046 37094391 37094390 37095046 656 ACAAAACATCTGCTAAAAATGCTGCATAAAGACAAAAAACTAATGACTTCTTCTAATTCTGGCTTTCTCACAAAT---GGAGAAACTCCATTGCACATAATGAAGGATAAAATACAGGAGTAATCT--------ATTAGACCTTA-GGCTTCAGATAT-ATGTATTCATTAAAG------GGTAGAACTAGTTATTTTATTCTCTGTAATATATATTTTGTCTGAATGCTTGGGCTCTTTAAAGTCCCAAAGTTTAAATAAATAAAGCATATTTAAATAAATAAAGCAAAATATGCACCCAGTAAAATGTGGGTACTTTGTAACTGTTTTGTTACATATTTTCTAAATGCATTTAGTA-----ACATGAAATATCAGTTATTCCCTAAGGTACTACGTATTTGTAGATCATAAACTTTTAGCTTAAATTAAACATCACAGCTGGTTGCTTTAATTTAATGCATTATAGCACAAATGTTTCAACAGCTTGACTAAAATGAGCCATACTGCAAATTCAAAGGAAGAGCGAAGGTCAGTGCACATGGAGCCTAGTGATTTGCAAACTTTTTCTTATTATTTGGACATGTTTAATTTATTTTGTAGAACTTAGCTTAGTGGAATTGAATTTGACAGAAT--AGTACAATTTAGCAAAATATCTTGAACAATTTTTATTTAAAACAA .::.:.x..:..x....----...x:.x:..x.xx.x:::.......x.:.:.x....:.:.xx.x::..:....---....:....:-...::.x.:...:::........:.x..:.x:xx...--------..x...x.xx.-.:.....x..x.-..x....:-...:..------.x.::.:::x:..xx.....:......x..x:..-.....xx.:...:x.x:x.......x..:x..::....::....:xx.x..---------------..x.::..:.....:---------------.::.:...:..:x::......x...x:.:..x:.x:.xxx.x....:-----....:x.......:...............:..::..x.................x......................................:.........:x..........................:..............x:.......:...............:......x.:........x.......:.:...:.:.x.xx..x.x:.x.x.-------:...:..:....:x...:.x.:......xx..::x:...:...--.:x.x..:xx....:.x...:x:..xx:xx...:.:...x..x.. 17M4I54M3D10M1I37M8D11M1D12M1D8M1I6M6D34M1I51M15I15M15I47M5D222M7I43M2D45M 432/612 70.6% 656/94230402 0.0% 70/612 11.4% 53780906 NA +3101 chr4 + 190214555 90877676 90877675 90877750 75 AAGATATATTAAGGAATGGAGAATAGAAGGAAAAAAAAAGAAAAAAAAAAACAGAAGTAAACGGGAGAAAACAAA chr4 + 94230402 86477024 86477023 86477098 86477024 86477023 86477098 75 AAGTAATACTAGAAAACTAGTAATAGAACAAAAATAGTAACAGAAGAAAAACAGTAGTAAGCGGGGGAAAAAAAA ...xx...:..:::..:x::x.......x:....x.:x.:x.:..:........x.....:....:.....x... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 4400652 NA +4452 chr4 + 190214555 90879465 90879464 90879703 239 AGTATAATAATAATAATAAAAGAGGAA--GAAGAAGAAGAAGAAGAAGAAGAAGAGG-----------------AAGAGGAAGA------GGAAGAAGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAA---------GAGGAGGAGGAGGAGGAGG--AGGAAAGAAGAAAGAA----GAAAGAGGAAGAAGAAGAGGAAA-------------GAAGAAGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAGGA chr4 + 94230402 15849132 15849131 15849423 15849132 15849131 15849423 292 agaaagatgataaagaaaaaagcgggaaggaaaaagataaagaaaagaaagaaaAGATTCCAGCTACCACTCCAGAGACGAAGGCACTTGGGAAGGATGGGAAAGATAAACCAAAGGAAGAACGGGCAAACAAAGATGATAAACCAAGAGAGATTAAGGAGAAAACACCGAAGTCTGACAAAGAGAAGGAGAAGGCCAAGAAAGAAGAAAAAGCTTCGAAGGAAGAAAAATCCAAGACAATTGTTACCACCATTGAGTCAAAGTCAGTTGCAGAAAAGGAGAGAGAAAAAGA ..x.x:..:....x:.x.....x..:.--...:....x:.....:.::.....:..:-----------------:...x....:------.....:.x::......x:..xx.:........x::.x.:.x:....x..x:..xx::::...:xx:.....:..:x.---------..x:.:...:.....:...--.:...........:.:----...:..:...:..xxx:..:x..-------------x:..xx:...xx..xx.x....:....:::....:.:.. 27M2I28M17I10M6I77M9I19M2I16M4I23M13I39M 154/239 64.4% 292/94230402 0.0% 53/239 22.2% 75030333 NA +3510 chr4 + 190214555 90879520 90879519 90879688 169 AAGAGGAAGAGGAAGAAGAAGAAAGAAGA---------AGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAAGAAGAAAGAAGAAAGAGGAAGAAGAAGAGGAAAGAAGAAGAAGAAAGAAGAAGAAGA chr4 + 94230402 32265486 32265485 32265662 32265486 32265485 32265662 177 AAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAAT-GCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA ...:..:::x.x.:.:..x.x::...:..---------..:..x.x:..::.::..:xxx.::....:....x-.x.x.x.x..x:.:........:..:::.::......::.....:......:..:.x:.x....:..x.:.xx::x::xx..xxx::..x.:....:...:... 29M9I35M1D104M 97/168 57.7% 177/94230402 0.0% 10/168 6.0% 58614034 NA +3890 chr4 + 190214555 90879527 90879526 90879708 182 AGAGGAAGA--AGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAAGAAGAAAGAAGAAAGAGGAAGAAG-AAGAGGAAAGAAGAAGAAGAAAGAAGAAGA---------AGAGGAAGAAGAAGAGGAAGAAA chr4 + 94230402 1317405 1317404 1317598 1317405 1317404 1317598 194 AGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAA ...:x....--...:...::.:...:.:..:::....:.::..x..xx.:..x:.....x...::x.::xx......:..:::..:::...x.x:..x:...:....xxx.:.xxx......:::::.x..-x.xx....x.:.:...:...:xx...:...---------..x::..x..x::.::....... 9M2I120M1I30M9I23M 108/182 59.3% 194/94230402 0.0% 12/182 6.6% 89562122 NA +3123 chr4 + 190214555 90879577 90879576 90879649 73 GAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAAGAAGAAAGAAGAAAGAGG chr4 + 94230402 55799656 55799655 55799728 55799656 55799655 55799728 73 GAAGAAGAGGAGGAGGATGAGGAGGAAGTAACTGTTATCCAGGAAGATGAAGACAGTGGCAACAATAAAGAGG .................x..........x.:xx.xx:xxx....:..x..:..x..x:.x..x..x....... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 35079921 NA +4413 chr4 + 190214555 90879607 90879606 90879720 114 GAGGAGGAGGAGGA-GGAGGAGGAAAGAAGAAAGAAGAAAGAGGAAGAAGAAGAGGAAAGAAGAAGAAGAAAG--------AAGAAGAAGAGGAAGAAGAAGAGGAAGAAAGAAGAAAGAAGA chr4 + 94230402 1500700 1500699 1500822 1500700 1500699 1500822 123 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaa .:...:...:..:.-..x..:..:......x:..::...:......:..:.x::.:....:....:x..:::.--------::.:.:x.:......:.:..x:.:..:...:.........:. 14M1I58M8I42M 76/114 66.7% 123/94230402 0.0% 9/114 7.9% 89378907 NA +3304 chr4 + 190214555 90879616 90879615 90879704 89 GAGGAGGAGGAGGAAA-------GAAGAAAGAAGAAAGAGGAAGAAGAAGAGGAAAGAAGAAGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAGGAA chr4 + 94230402 58935720 58935719 58935813 58935720 58935719 58935813 94 GGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGG--GAAAAAGAGGAA .:.:.x...:..:...-------x...:..:..x:.........:.:..x.:.....x.:.:......::..x..x:x:...--...:........ 16M7I59M2D12M 62/87 71.3% 94/94230402 0.0% 9/87 10.3% 31943896 NA +17214 chr4 + 190214555 90923270 90923269 90923929 660 CATGAATTATACACTAATCAAATTTTAATAAGTGGAGAATATTAGTGTAGAAGTACACACCTCACCAACAATGTGTTGTTGCTGTTTTTTCATTTTGCAGGGAAAAGTCCGGCATTTACAGAAGGCTTTTGCTTCAAGAGTAGATAAATCCACACAGACTGAACTACTATGCTATGATGTAAGTAGCTCTGTAAAAC----------CATTTTTAA-CTTCATTATTGGCATTCAGACCTCCA-CAGCTTATTGACCTCTGCGGCTGCTGTGTCCATGCATTGATTTAACAGGATTTAGCGGTGCACCATTCATCTTTTGCTCTTAAACAATCCCCAAATACCTCCTGGAACTAAAAAAGATGATTACAGGCACCAACTGGCATACCAATGCCTTATTAATTTTTTTACATCAACAATTTTGGTACAGTCTTTTGAATTAGTGTATTTGCAGACATGTAGAAGATATGCATTAGAAGACTAGGGCAATTTATTT---TTTAAGAAAATATTTA----TTTATTAACAGTTTAATAAAGTTACTATGTTTGTAATCACCAAAGGTGAAGCACATCATTTTTATATGCAGACACTTAAAGGCAAAAACAACTTTGAAGAAAAATTTAAAATAATGTTTTAGCTCTT---GGGCTTCAGTGCAG----GCAGCAGAAAGTAATTTAATT chr4 + 94230402 37108280 37108279 37108938 37108280 37108279 37108938 659 CATGAGTTTTGTACTTATTTGTTTTTTTGTAGCTGCAAAGCCCAGCAAGCAAAAAGATGACTCACCTATGCTGTGttatttttttattttt-ttttaCAGGAAAAGGCTCAGTGTTTGCAGAAGGCTCTTGCTTCCCAGGCAGATAAATCCACACAGACAGAACTTTTTGGCCATGATGTAAGTAGCTGTATTGAACAGTACTTTTTTGTTTTTAATCATCTTTATGGGTGTTCAAAGTTCTGTCAGCCTGTTTGCCTCTGCTACTGTTGTGTCCATGCATTGATTTAATGGAATTTACTGGAACACCATTCATCCTTTGCTGTTAATTGATTCTCAAATGGCTTCTGCAACATCAGAATATAATTGCAACTACCTGCTAGCATACCAATACTCTATTAATTTT---------ATGCTTTGCGAACAGCTCAT--AATTACCATAAGTG----AATGTGGAGGGTACGTATTAACGGATT---GTAATTTTCTTCAGTGTTGATGGTTATTTACATGTTTATTAACAAATTAATGACATTATTACATTTATAACCACCATATGCTGTCTGAACAATATTTGCATTTTGGAAGATAATGGAATAAGTGCACTT--------ATGCCAAGTATTGTTAAAGCTCTTAAAGAGCATCAGTCAAAATTTGTCCTAGAAAGTGAATTGATT .....:..x.::...x..:x:x....xxxx..:x.x:..xx::..::x:x..:x.x.::x......x.::x......:..x:.x.x....:-....:....:...:.::.:.::...:.........:.......xx::.:..................x.....x:.xx..:...............x.:.x:...----------::.......-.x..x....x..::....:.x:..::-....:.:..x:.......x:...:.....................::.:.....x:..x:...........:......x....x::..:.:.....:x..:...x...xxx.:..x..:...:..:x:...x:..:..........:.::..........---------.::x...xx.x....:::x.--.....x::..xx..----x....:..:.:..:.:....:x:..:.---.:.....x:..---.x.x::x::x......----..........:x.....:.x:...:..::...:...:.....x.x.:x:xx::x.:x..x...::..x:x.:x.xx...x..x.x..:::xx:..--------..x:x..:..x....xx.......---.:..x.....xx.:----.:xx:.......:.x..:... 91M1D105M10I9M1I26M1I160M9D20M2D14M4D27M3D11M3I16M4I95M8D24M3I14M4I21M 417/633 65.9% 659/94230402 0.0% 53/633 8.4% 53814990 NA +3445 chr4 + 190214555 90932884 90932883 90933053 170 AAGAAAGAAGGAAGGAGAAAGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAG chr4 + 94230402 56107291 56107290 56107462 56107291 56107290 56107462 172 AGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGATTGAGGAACAAG .:.:.....x.x..x:....:......x.:.........x.x:x:::...x.x..x.::.:..x.x.:.:..:.:x.:x:.:..:.:..x.::.:x.:::x.::xx:.x:..xx.x..:x.--:...x.::...:.......x.:::..:..:.:.:x..xx...:.:x... 121M2I49M 95/170 55.9% 172/94230402 0.0% 2/170 1.2% 34825593 NA +4114 chr4 + 190214555 90932891 90932890 90933084 194 AAGGAAGGAGAAAGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----AGAAAGAAAGAAAGAAAGAGAAGG-AAGGAACGAAGGAAAGAAGAAAAGAAAGAAAGAA chr4 + 94230402 75995036 75995035 75995235 75995036 75995035 75995235 200 AAGAAGGTAGGATGAACATGACAATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAAAGAACTAGAAAAACAGCAAGGGAGAAGCAATTATGAAAACAACAACAAAAAAAACCCCAAACAGCAGGCAATGAAGAGAATACAACTTGTTAAGAAAAGGAGAAAA-ACAGAAAGAA ...:.:.x..:.x...x:x..x.:x......xxx.::....:.:..x:..::..x::...::.......x--..:..:x.x.......xx.:.:.:.x..x...::....:x..xx.x::...x..x:.x.:...:..----.:.x..x.:.x..x:.......x:-..xxx::x...:....:......-.x........ 70M2I66M4I24M1I23M1D10M 121/193 62.7% 200/94230402 0.0% 8/193 4.1% 14937855 NA +3051 chr4 + 190214555 90932905 90932904 90932975 71 AAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112182 41112181 41112252 41112182 41112181 41112252 71 AAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..........x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 49820723 NA +3106 chr4 + 190214555 90932909 90932908 90932990 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:.x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 49820731 NA +3010 chr4 + 190214555 90932935 90932934 90932999 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 61918262 NA +3831 chr4 + 190214555 90932945 90932944 90933101 157 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAACGAAGGAAAGAAGAAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGA chr4 + 94230402 49044660 49044659 49044813 49044660 49044659 49044813 154 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA .:.:.....::..x..:::.xx.::.:x:.xx.......x..:x.:x..:.::x.xx...x:......---.:....:xx..........::..:.x:.:.:.x.:...:..x...:...x....x.:.:..xx:.::xx.:...:..::.:..x.. 68M3D86M 91/154 59.1% 154/94230402 0.0% 3/154 1.9% 41888285 NA +3206 chr4 + 190214555 90932957 90932956 90933069 113 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGA--------------ACGAAGGAAAGAAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........:--...xx.x.:...:.....:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:..:.....:...--------------.:.......:.:.. 9M2D88M14I14M 73/111 65.8% 125/94230402 0.0% 16/111 14.4% 39784578 NA +3164 chr4 + 190214555 90935009 90935008 90935059 51 ATATGAAATGCATATATATATGTATATATGTGTGTGTGTATATATATTATA chr4 + 94230402 24523906 24523905 24523956 24523906 24523905 24523956 51 ATACAACAGGCATATATATATGTTTACTTGTGTGTGTATATATATATAATA ...::.x.x..............x..:x.........:.........x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 66411103 NA +3168 chr4 + 190214555 90941895 90941894 90941964 70 AAGCATTAAGAGTTG---TTAGAATATCCTGTCTTCTATTTTTTTTTCGTTTGTTTGTTTTGTTTTGTTTTTT chr4 + 94230402 15587080 15587079 15587152 15587080 15587079 15587152 73 AAGCATGGAGACTTGAATCTATCTTATCATTGCTTCTATTTTATTCCTGCTTTTTTGTTTTGTTTTGTTTTTT ......x:...x...---:..xxx....x.xx..........x..:::.:..x.................... 15M3I55M 54/70 77.1% 73/94230402 0.0% 3/70 4.3% 75354815 NA +3131 chr4 + 190214555 90957052 90957051 90957117 66 ACAGGCATGAATCAGCAGCAGATCCAGCCTGATATTTCTTTCTTTCCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 38344768 38344767 38344833 38344768 38344767 38344833 66 ATAAACAAAAGACAGCAACATGGTAAACCTGATATTCTTCTATTTTCTTTTTCTTTTTTTTTTTTT .:.::..x:.:x.....:..x:x:x.:.........::.:.x...:......:............. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 52612284 NA +3105 chr4 + 190214555 90988319 90988318 90988374 56 AGTGATATCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGA chr4 + 94230402 55945374 55945373 55945429 55945374 55945373 55945429 56 AGTAATGTCTTGCCACAGAAAAAAAAAAAAAACAAAAAACAACAGGCAATACAAGA ...:..:.....:.x..:..............x......x..x.:.x..x.x.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 35042945 NA +3334 chr4 + 190214555 91006833 91006832 91006914 82 AAAAGTGGTGAAAGTAGGCATCCTTGTCTTGTTCCAGATCTTTCAACTTTTTCCTGTTCTGTATTATGTCACCTGTGGATTT chr4 + 94230402 83227110 83227109 83227191 83227110 83227109 83227191 82 AAAAACGTTCAAGCTAGGCCTTTGCTTCTTATTCCTCATCTCTCATTTTTTTCATTTTCAATATGATATCTCCTGTGGATTT ....::.x.x..:x.....x.::x:x....:....xx....:...x:......x.x...x:...x..:..x........... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 7779723 NA +3113 chr4 + 190214555 91013919 91013918 91013965 47 CACACTTTTTTGTTTTTGTTTTTGTTGTTGTTGTTGTTGTTTTGTAT chr4 + 94230402 18791501 18791500 18791547 18791501 18791500 18791547 47 CAGATTTTTTTGCTACTGTTTCTTTTGTTGTTGTTGTTGTTCTGTAT ..x.:.......:.x:.....:.x.................:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 72222418 NA +3163 chr4 + 190214555 91025832 91025831 91025873 42 GTGTGTATGTGTGTGTTTGGTTTTGATTTTGTCTGCTTGTTT chr4 + 94230402 48767283 48767282 48767324 48767283 48767282 48767324 42 GCGTGTGTGTGTGTGTTTGGTTTTGTTGTTGTTTGCTTGTTT .:....:..................x.x....:......... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 42258549 NA +7729 chr4 + 190214555 91041493 91041492 91041783 291 ACTATGGAAAAGACATGCATCACTTGG---AGATAATTAGAAGCAAAGAATCCCCGTG--ACTGTACAACAGATCCCCAGGTATGGACAATGCCATTGCCTGCAGTATTTGAATTTGACATGACAGCTACCAGGTGTTACAGGCTTACCGGTTTTCAAAGTAAAAGAAAAAAAAATGTAAGCA-CCTTCACAAATGAAACAGAACAGATTTTGCCAGCATAAAATACCTGGCTTACATTTCAACAAAGTCAATTCCAGC--CCTTTTAACT-AAGGCACAACAACCTGTTTCAGTACACA chr4 + 94230402 37139344 37139343 37139620 37139344 37139343 37139620 277 ACTATTGCAAAG--------CTCTTGGGGTAGAAGGCTAGAACTGAGAAGCTCTCATGTCATTATACAACAAGTCCCTAGGTATGGAGGCTGCCATGGGCTGAAATACATTATTTTGACGTGACAGCTACCAGGTGTTCTCTTTCTATTTGTTTTCACA-------CACAAGAAATCTGAGGGTCTTTCACAAATGAAGCAGAACTGATGCTGCCAGCATAAATTTTTTA--------TTTAGAAAAGTAAATCCCAGCTGCTCTGTAGCTAAAGGTTAGATTATTTGCTTCAAAACATA .....x.x....--------.x.....---...x:::.....x::.::.:::.:.:..--.:.:.......::....:.........x:x......x.x...x.:..:x.x.x......:..................x:xxx::..::x.......x.-------x.x..:....x.:..x:-.:............:......x...x:............x.x::.:--------..:.:x.....x...:.....--.::.x..:..-....:xx:.:x.::..:....:x...:. 12M8D7M3I28M2I99M7D17M1I46M8D21M2I10M1I28M 185/268 69.0% 277/94230402 0.0% 32/268 11.9% 53902149 NA +10633 chr4 + 190214555 91066285 91066284 91066529 245 TCTCAGAAAAAGCTAATTATCTTAAGGCTGTGAGTCAACTGTTGCCAAATGGTCGCACAGTTAGCGACAGAGG--AGAAATGAAGCACAGAGCAGTAAACCTTGGGGATTCACCTGGCCTCCTTCGC-AGCCAAGATTTTTCCTATGGTGTTAGACAACAATTAAAAAATTTGAAA-TGGAAGGTGACTCAGTAAAGGGCAAACTGAAAAGTGTAACTCTCAATCAGATCATCCATATCACAGTAAAAG chr4 + 94230402 37146575 37146574 37146813 37146575 37146574 37146813 239 TCTTAGCAAAAACTAATTATTTGAAGGTTTATAGACTGCTGGTGCCAAATGGTCTCACAGTTAGTAACAGAGTACAGAAATGAAAC----AGCACTAAACCTTGGGGATTCACCTGGCCTCCTTTGCAAGCCAGGTTGGTTCCCACAGTGTCAAATAACAATTAAAGGAATTGAGGTTTGAAGGTGGCTCTGTAGAGGTCAAACTAAAAA---CAGTTTTCAGTAAG---CGCCATACCTTAGCATAAG ...:..x....:........:.x....:.xxx..x.x:...x............x.........::......x--.........:.----....x.............................:..-.....:.x.xx....:.::....:.:.:..........::.x....::-.x.......:...x...:...x......:....---:.::.:...:.x..---xx.....:.x:..:.x... 73M2I11M4D37M1I48M1I33M3D14M3D19M 181/235 77.0% 239/94230402 0.0% 14/235 6.0% 53919710 NA +8968 chr4 + 190214555 91072119 91072118 91072405 287 TCCCTGGAGCAGAAGGAATTTAACTTATGCAATGTACCAAGATGAGAACTGCTAGAAAACTGGGGGGCATGGAAGTGCTAATCTAGTTTAATATTTTAGTTAGCCTTAAGCAACAATAATCACAGACACACTCTATGAAATGTTATTTGTGCCCATACAGTAACATTAATTTTCTTTTAATTTTTGTCTGCCTCAGGAAATATTTCAATTGAATTTCACATTTTTTCCCAAGGAATCAGGGCTTCTGGAATTCAACGTCATTTACTTAACTTTTTTTCCCCACAGTT chr4 + 94230402 37149429 37149428 37149695 37149429 37149428 37149695 267 TCACTGATGCA-ATGGCATTTA-TTTATGCAACAGGAAAAAGCAAGAACAGCTGACCATC--------------ATATCATTCAAACTTAATATTTCATTTAGCCTTTGGCTAAGATAACCATAGATGACCCCTGTGGAGTTTTATTTGTGCCCGTAGAGTACCGTTACTTTTCTTTTAATCTTTCTCTGCCCCAGGAAACATGTCAATTGAATTTTGC-TCTTCATGTAAAGAACCAAGAGCACTGAGAGCCAACCTCTTTTCCTT---TCTTTTTCCCTTTAGTT ..x...:x...-.x..x.....-:........::x:xx..::::.....x...::xx.x.--------------:.:::.x..x.::.........:.x........x:..x.x:....:..:...::xx.:..:..:.:.x............:..x....x.:...x............:...x......:.......:..x............::.-.:..:x:x:..:...:..:.:x:x...::.x:....x..x...x...---.:........:x:.... 11M1D10M1D37M14D145M1D47M3D17M 183/267 68.5% 267/94230402 0.0% 20/267 7.5% 53922690 NA +3277 chr4 + 190214555 91101495 91101494 91101577 83 CATGGTGGCATGTGCCTGTAATCACAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACTCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:x..........::........x.xx.x...x.........:.:.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 15068298 NA +4686 chr4 + 190214555 91182513 91182512 91182787 275 GCTTTTGCAACTGCTGTTTTAGGGAGAGATTCATTCTTTCCTCTGTGGCTTGTCCTTGAGAATTGTATGGGATACCAGTAATGTGTTTAATATTCCACATAGAGAAAAATATAGCTAGAGCTTGGCTATTATAGCCTGGGGCATTATCTGTTTTAATAGAAGCTGGAATGCCCATCACCACAAAACTGCAA--AAGATGACACTTAACACAGGCGGAAGACTCTCCTATTTGATGTGTAGCCC----AAAGTGAGAAAAGGTGTCCACACATTACATGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGA-CACGTGTAC ....:.x...x.:.:x.....:x.xxxx...:::::x...:x..:.x.::..x...xx:.:xxx..x::.......x...x.......x.:x::...::.xx:x.:...:x:xx.x..xx:x:.:...x.:...x.....x....:........x..xx:x:x...x..:.....x...:....:.x:...--:.....x.x:.:x...::x:::.xxxx:.....x:x....xxx..:....----...:...xx.x.x..:..:.:.x.-:..:..... 191M2I50M4I24M1D9M 159/274 58.0% 280/94230402 0.0% 7/274 2.6% 72117192 NA +3151 chr4 + 190214555 91219286 91219285 91219329 44 ATAGTCAATATTTACAGTTTGGCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 37734918 37734917 37734961 37734918 37734917 37734961 44 ATATTCAATATTTATGGGTTGGCTTTTTTTTTTTTCTTTTTTCT ...x..........::.x.................:......:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 53484368 NA +3063 chr4 + 190214555 91225142 91225141 91225207 66 AAACAAGAAATATGATATATATATGTGTGTGTGTATATATGTATATAATTATATATAATATATATA chr4 + 94230402 85548420 85548419 85548485 85548420 85548419 85548485 66 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATA ...x..:...x.x..xx.....:.:........:...:..:......x......xx:.:..:x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 5676722 NA +3265 chr4 + 190214555 91225142 91225141 91225237 96 AAACAAGAAATATGATATATATATGTGTGTGTGTATATATGTATATAATTATATATAATATATATAATATATAATTGTATACAGTTATATACATGT chr4 + 94230402 37548419 37548418 37548513 37548419 37548418 37548513 95 AAACAAAAAAACTTACATATGTATGTGAATATGTGAATATATGAAAAATTATATGTGAAAAACATTGTATATATAAATTTACA-TTATGTCCGTGT ......:...xx.x.:....:......x:.:...:x....:.:x.x........:.:.x.x.:..x:......xxx:.x....-....:.x.:... 83M1D12M 65/95 68.4% 95/94230402 0.0% 1/95 1.1% 53676723 NA +7138 chr4 + 190214555 91233214 91233213 91233575 362 TGAAAGAGATTAATTTTGTACTCACTTATT--GATTAAACTCTCTCAGTAGTCTTTGTTAAAGAAAAAAATCATTTTATTTTAATAAAAATGTGCCATAGAGATAACACCTTTGGAAAGTGAAGTGAAAGTGAAAGACCTAATGAGATAATAATTTGCAGATACGTACCTTCACTACAGGACATCTCCTTGGAATTCAAGAAGAGTCACTGAG-------TGTGAATTTTATTTAAGTTATTGAATAGAACACACTCCTCCAGTCTCTCAGGCACAAAAC-CTAATGCCTAATTTAAAAGATAAGTTTCTGTAAAATGCTGATTAGGTCATTAACAAGATAAACCATTAAATTGCTACTAAGGTTTTTCTGT chr4 + 94230402 37197576 37197575 37197929 37197576 37197575 37197929 354 TAAAGGAGGCAAGTCTTATTTTTAAGTATTATGAGTGTAATTCATAAAGAATCTTTATCACA------AACTATGTTCTCTCAAAACATAT-TGTCACTAAGACATCACCTTTCAAAGATTATGTGAAAGTGAACTGCTTGATGAAATAGTAATTTTTAGATAAGTCCCTTTGTCCAAAGATGTCCCTCTGGAATTCAGGAATAATAACGGGGAAAGGTCTGTG-ATTTTATATAAATTATTTAAGACA------TTATTGAAATTCTGAAGCACAATACACTAGTATGTAACTTAAAGGGC--GCTTATGTATGAAGTGACTTAGATCATTTGCAAAA-ACAGAGTTAAAACAACATT-AGGTTTTCCCGT .:..:...::x.:.:..:.x:.:.xx....--..x.:x.x.::x.x.:x.:.....:.:.x.------..::..x..x.:.:..x.x.x..-..:..:x:...:.x.......x:..::.x.x...........xx:.:.:....:...:......x:.....x..x....::::xx.:..::..:.::.........:...x.:.x..x.:.-------....-.......x...:.....x..x.x.------.:x.:x.:x:...x.:......x..-...:.::x...:.....:.::--.:..x....x:.x.:x:x....:.....x:...:.-.x.xx:.....x::x:.:.-.......:.:.. 30M2I30M6D23M1D121M7I4M1D24M6D25M1I21M2D35M1D19M1D12M 219/344 63.7% 354/94230402 0.0% 28/344 8.1% 54035638 NA +7427 chr4 + 190214555 91257742 91257741 91257917 176 TTAGAATGGTTCACCTTAGTATTAAATGCCCTCTGTGGAAAAGGATATGCAGATGTTTCTTCCACATGAGCTACAAATGTGCCAAGAGACCACAAGTTAAATATTTAATGTTAACATTAAGATGGAAATATGTCTTCCTTATTGAGCTATAACTTTA--CTCATAAATATTTGTGGGA chr4 + 94230402 37203823 37203822 37203995 37203823 37203822 37203995 173 TTAGAATCTTTCACCT-AGAAGTGGAAGCAGATTGCTGAAAAGTGCATGTAAATGTTGATTCA----GAGTTGAAAATGTGCCAACAGGCTGCTAGTAAAATATTTACTGATAACTTTAAGATGGAAACATGTCTTTCTTATTGAGCTGTAACTTCAGTTTGAAAGATATTTGTAGGA .......xx.......-..x.x.::.x..xxx:..:x......x::...:.:.....xx...x----...:.:x...........x..:.::.x...x.........x..x....x............:.......:...........:......:.--:.x.x.:........:... 16M1D46M4D90M2I19M 129/171 75.4% 173/94230402 0.0% 7/171 4.1% 54053919 NA +3064 chr4 + 190214555 91266229 91266228 91266292 64 GGTTGTTTTTTTTGTTTGTTGGTTTGTTTTGTTTTTTTTTTGAGACAGAGTCTCACTCTGTTGG chr4 + 94230402 53703191 53703190 53703254 53703191 53703190 53703254 64 GATTGTTCTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTCTAGAATTTGATCTTTACAGTTTTGG .:.....:............x...............x.:.x..:x:x..x::.:..xx.x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 37563038 NA +3442 chr4 + 190214555 91266232 91266231 91266278 47 TGTTTTTTTTGTTTGTTGGTTTGTTTTGTTTTTTTTTTGAGACAGAG chr4 + 94230402 12568757 12568756 12568803 12568757 12568756 12568803 47 TGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTAAGGATAAAG .................x...................x::..:.:.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 78697475 NA +22287 chr4 + 190214555 91283451 91283450 91285009 1559 GCATCAGCTAAGGAATTGGTGCAAGGGAACCTACTTTTT---------------AAGGAGGCCACT-TCATAAATATCATGTGTGTTCTACTTTTCACAAAACTT-------CCTGTCAAATTTAAATGTTCCCATCTTTTGCTGTAATTTTTATTTTACTTTCATG----TTTTGGTGTGTTATATATATTTTTTACTTA--------------------ATTTCCTACA-AACATT----AATATA-----TATTTGTCTGCCAAAAATAGGAACTCATAGGACTTATTTGATAAAAGCAGCCTCTT------AAGCCACCTTTATTTA-------------TTTTGATTTCTATTCATTTCTCCACCATTTTCTACTGTTACTAATGCTGACATCATTTGCTCCAAAAAAAAAAA----------TTTGTTTTATTTACAGGGCACAGCTTATGGAAGTGCTCCTGTACCTTCTCGCAGGCAATTATGTGAGTCTCTTAAATTCAGCTCTGTGTTGTAAACATGACTGTGTTCCTGTGCTGTAGCATGGCATGCTGATTGAGACCAAATGCCCAAAGGTCAATATGCAATCCCCAGTGTTGTATATTACCTATAATATGTTTGTAGTAAATGGTTCCCTTTGCCTCTTCCTTATCTGTTTGTCA----TTATCCAGCCCATTTAAGAAAACT-------------GCATTGCAATGTGGCCA-ACTGCATTGAGAC----TAATGGCTCAAAGTCTGGGGCAAAGAAAGAAGTGACTCTTACTTAAGTTTA--TTTTCAT--TTAGCAACAATATTAGCAC-------TCTCTCTCTCA-ACTC-----AGTAAGGTTTC------------------------TTAAGTTCTAACTCCT--TTTACTTATTGGTTCAAAGACTTCTTATATCATGCACAGTTGTGT--------TTTTGCCACAGCTAATGAGAACTTTCCTAGAAAAGGAAATCCATTAAAAGAAATACTTCTTCTAGTGAATTTAAAG--------CAAACTTGACATTGTAACAATGTTGGTTTTTTTTCCCAAAGTCATCACATTT--------------AGAAAATTGAAATTA--------ATCTATAAATGTTTAGATAGAAAGCCCAGAGTTTA--------CAACCTTG--------------CTCAGCTGT---------------------GTTATAA----------ATATATGCACCTCGGCAGAGTCAGATACCTGCATTTCAGTTCGGGA-GATTTCTGTGACAGCTTGTCTGCTTTAACA-TGTACTTTTTGTCAATGAGAAATGTATATGTAAATTGAATATGTAGGCTCTCCAAAGTGCCATCAGACTTTGAGA--AAGAGCTATTTTCATT--GCCCATTCCATCCATGTCTTTCCTCTTTTCCCACACC-AGCATCCGTCAGATAATCATGGTTGTTTACCTCCAT-----TATAGACTGCTACAGCAAGACACCCATGTGACTCTAATTGTCATGC--------CTAGCAATAAATGCCAAGTAAATCCATCTTAATATGATGTTAAAGG-TGATTCA-AAGGTACAGTCCTGTTTGCATAATGCTTTTCTTCACTATTGGCAGAAAAAAACATATGAGTTGATGACA----TTCACTGAGAAGGATCCGTGAATCACTTCAACAAAAAATGCAGGACTT-TCCACCATGATAAAGCTGCCCCAA-CAATGAACAAAAAAATATGTACTTTACTATCTCCTTTCTAATGAAAAAATTTTGAAAGTTTGGGTTCTTATGAATATA chr4 + 94230402 37209963 37209962 37211692 37209963 37209962 37211692 1730 GTATCAGCTAAGACATTGGTGTAATTAAGCATTCTTTTTTTTTTTTTTTTTGTAATGAAATCCACTCTAATATATATTCTATTTATTGTCCTTTCCGTCAAATTTAATCATTTCTGACAAGTGTGAGCATGCCTGTCTCATCCTGATACTTTTGCCTTATCTTTATTCTCCTTCTCTTTTTCTATATTTTTTTTTGTCTCATTGTGTCCACTGATGGGTGGATTACTCATAGAACATTTTCAAATATAATTTCTGTTTATCTG---AAAATAGAAACT----GCAGTTCTTCAGTAATAACAAGCTCTTCTATCTAAACAGTCTTTATTTCAGTGCTTTCATTTTCTTCATGTCTTGTCATTTTTTT-TCATTTGCTACTGCTGTTAAT-CTGACATCCTTTGCTCAAAAAAAAAAAAGAAAAAAAAATGTGTTTTATTTACAGGGCACAGCCTTTGGAAGTGCTCCTGTACCTTCTCGCAGGCAATTATGTGAGTCTCTTGAATTCCGCTCTGTGTTGTAAAGATGACTGTGTTCATGTGCTGTAGCATGGCATGCCAATATAGAGTTAATGCTCTGAGGTCAATATTCAACCGTTGGTGTTGCATATTGCCTGTAACGTGCTTGTAGCTAACAGCTTCTGTTGACTC--CTTTATTTCTTTGCTGTGTTTTGTCCAACACATT---GTAAACTGGGGCTGTGCTAGGCACTGTAGAGTTGCAAGAAGGGAATAAAATACTATATTGACTCAAAGTCTGGAG---GGGAATAAGTA--TAATATTCCAGTTTATGTCTTCATAATGAATAGCATTGTTAAAACCAAAGAATATCTCTTTCACACTCTTCAAATTAATCTTTCAACTGTGCGAAACAAACAAACAAACAAAAATCTGGATCTTAATAAACTAAGAAGTGGAAA----------ATCAAGCAACGTGGTGTAAGGCAGGTGTTACTAAGACTAACTATATCT-----------------------------ATATTTGTTCTAATCAATTTAAAGAACCATCTCATCCCCAACTTTGGGG-ACTGTTAGGGGACTTTCACTGAGGAATCTCCTTTATTATGGACTAATAAGTCCATTGAAAATATTGACAATATATATTATTTCTTTGGGAAAACAAACAAAACTCAATTACCCCCATCTTCGCATTCCCTTCCCCTCCCAGCTCCCAATTCACCCCCTAAAAAATAGTAATAAGCAAGAAATCACAGATGTGATTTAAAAAAGG-AAACATTTATGTTCTAACTCAAGATGATCTCTCTG---------CTGCTTTAACAGTGTGCGTGT------------GTAAGTGTGTACAGTGAACATTTAGATGCT-CACAATACCATCAGACTTTGAGATGAGGACTTATGTTCCTTGGGTCTATT---TCTGTCTCTCTCCTCCTAGCTTGAGTTGAATGTCCATCATAAAGACACTGGTGTAT---TCCATATACATATAATAAGCTACAGCCATGCA-CTGCATTATTATAATTACTATGCACTACATTACACCACTGAATGTCAAATAGTTCCATCACAATGTAACATTACAGGCTTATTCATAAAATACAGTGTGGCTTGAACAGTGCTTT-----GATGTTGGCAGTCTTGAA---ATGTGTTGCTTGCATAATTTCACCAATGCTGCTC--TGGTGTATTCATAGGAAACATGTAATATTTGTCTATGAATGTGGGTCTTACCAAAGTAACTAAAAATACGGTTTGTATATCGTTGTCTTTTCTTTCATGCAATTATCTTAGCTGTCCCTATTCTTCTGGATATA .:..........:x.......:..xx:.:.x.x......---------------.x.:.:x.....-.x...x....:x.:.x.:..x.x....:.::x...:..-------:...x...:.x.:.:::.x..::...:x.x...xx.:....:::...::..:..x----..:.xx.x.x:.....x.x.....xx..:.--------------------...x.::.:.-......----......-----.:...:....---.......:....----.x.x..x..:::...x.:..:x.....------..:.x::........x-------------.:..x..x...xx......:.::-:.....x......:.::....-........x.......x...........----------.x......................:.x..............................................:.....x...............x............x....................::..xx...x:x.....:.x:..........x...:.x:::......:.....:...:...::..:......:x..::.:.:.:x...x...--.:....:.x....:::----..:....:.x....---.x.....-------------...:..:.:x..x..x.-.xx.x.x.:.:.:----..x..:............:.---:.:..x....:--.xx..:.:x......--.:.....--.x.::.:..x.:...:x..-------.x.....:...-....-----.x...xx....------------------------:x..:x...::x..:.--.xx...x.xx:..xx...----------....x...xx..x....--------.x..:.:.x::....:x.x.x..-----------------------------...:..x.....:.x.........--------..xx.:::..x...x::-.x....:.xxxx:....x.x:..xx...x.x...--------------..xxx.......x..--------..x...x.x.x:..x.:x.:..x:xx..:.::.:.--------..x.:.:.--------------.:.....x:---------------------..x....----------.:.x...::x:.:::x.:..x-.:.:.::.:::..::.::..::..-...:...x..---------...........-...:.x.x.------------:.:x:.:....x.x....:..x...::x..-..x.:.:................--.:..x:...x...x..--.:.:...---..::.x...:.....:.xx.:::x:::-.:::...:...x.x.:x..:x.x...x.---.....-----....:xxx........x.x:..-.::::.x.:.x.....:::....--------x:.x..x.:....:...:..:x......x:...:.:.::...x...-.x.....-..::......x:x.:...x.:.:......-----:x.:.......xxxx:..---...x....x.x:..----.....::.x:xx.x..--..:xx:.:.:xx.x:...x...:.:x.:..-..:.:x.xx:.:::x..xx..x..-:..:x..x..x.x::.x....:x.:::.:...::.:.:.x...x..xx..:..::xx..::xx:.....x..:..... 39M15I12M1I38M7I55M4I30M20I10M1I6M4I6M5I10M3D12M4D27M6I16M13I23M1D21M1D28M10I221M2D16M4I14M3D7M13I17M1I13M4I20M3D11M2D15M2I7M2I19M7I11M1I4M5I11M24I16M2I18M10D17M8I23M29D24M8I17M1D34M14I15M8I35M8I8M14I9M21I7M10I21M1D24M1I10M9D11M1I9M12D30M1D23M2I16M2I7M3D27M1I28M3D5M5I22M1D23M8I46M1I7M1I29M5D18M3D14M4I16M2D30M1I24M1I78M 985/1460 67.5% 1730/94230402 0.0% 369/1460 25.3% 54073488 NA +3039 chr4 + 190214555 91288156 91288155 91288208 53 ATATATACATACACACACACATATACACATACATACACATATGTACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.::..:........:x...:x.....::......:..::......... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 68040434 NA +8601 chr4 + 190214555 91332786 91332785 91333391 606 TAAATATCCAAGTGAAATCTGAACCTACTTTTTATATAAAAAGGCCTTGTCATTTTCCCTGTAAAGTTTTAAATAGCTTTATTTCTTCAGGGAG----ACATTCTGCCCCATTAAAAATGGCCACATAAGTAACATTA----TTTCTATTATGTATAAAAGTTTATTAAATTCACTGTCTCACATGCAACTTCAGTTTCAAAATTACT----TGAGATGAACAAACTTAACTCTCATGGGAGAATGTTTCTCCTTGTTCTTGTGTTAGATTTTTATGCTTATGAGCATCTAAACATCCATTCTTGTCACAAAGGCAATCTTCGCGAAACATCTGCAGAAACATTTGGAATGCTATTGTTATGAGAGGAATTGTCCAAGTGTGCATGTTTTTATAACATACCATTATGGTTGGATTGATAGTCCTGAAAAAAAAGAATTCTGAATACAGTATAATGCACCATCTTAATCATCTACCACTGTGTATCAGACAAAATGACTTGTTTATCATAGAATTCTTCAAAACTGA-AATGTAAGTTGCTT-CTAGATTTGCAAGTGTTATGTCACCTGAAACATTATTCATTTGCAGTCAACTTATTTGCT-GAGAAAAGCATTGTAAAC chr4 + 94230402 37236977 37236976 37237509 37236977 37236976 37237509 533 taattattaaattaagatttaaaacttgtttttata--------------------------aaatctttcaaaaa--ttatcttttagaaaaatgtaataatttGCAGCATGAATTATGGCCTAATAAT--ACATTGCACTTTTCTAGCTGAAAAAATCCTTTTCCAGACTTTCCACTCTACATTTAATCT-ACTTTTTAACTCACTAAACTTACATGAACAGTTATA----TTATGGGGAAAT-TCTCTCTTTG------------------ATGCTTGTG----TCTAACCAGCCATCTTTGTTAGAAAAAGTATCTTTGCTGAACAGCTGCATAAACATTTGGAATACTATTGTTATCAGAGGATT--------------TTTTTTAGAAACATACCATTATGTATGAATTGGTAGCCT---AGGAAGAGAATTTTGAATAGCATATAATACACTAGCTTTCTCAACTGTCATTGCATGTCTCCCTCA--TACTTGCTTTCCAAAACAGTATCTAAA--TGATAATATGTATTGGTTACTGTACTAACAAGCATCAGG---------AAAGTAGTCTTTTCAAACTAACCTGTAAGCTAGGGGGAGGCATTATAAAC ...x...:x..x.:.:..:.:..x..xx........--------------------------...x:...x..x.:--....:.:..x::::.:----.:.x.:...xx...x..xx......xx....x--.....:----......x:xx:x.x..xxx...x::.:.:.:x.::::::....x:..::.-.x...:x..x.:...----.x.x.......:x:x..----.:.....::...-.:....:...------------------......:..----.....x..x....::....:.x...::xx.....:..x:....x.....x.............:..........x......x.--------------.x....x:x..............xx..:....:...:.:---.::..:......:......xx:......:...:.x...xx...x..::..:..::.:..xxx.xx.--x.....:..x:..x.:x.x.x.::...--...-...:.:x:...x..-..:x.:.x:....::.:.x.---------.x.x..x..x...xx.:::...:.:.xx...-.:.::.:.....:..... 36M26D14M2D16M4I32M2D6M4I50M1D15M4I17M4D12M1D10M18D9M4D83M14D39M3D66M2D27M2D3M1I14M1I20M9D31M1I18M 343/518 66.2% 533/94230402 0.0% 103/518 19.9% 54095809 NA +3579 chr4 + 190214555 91357792 91357791 91357930 139 ATTTTTTTTTTCTTTAAACAACCAGTTAATTTATTTCAGGACAAGAATTTACCATATAACACTCTTTTTACCTAAATTCTGCCTGCCCCCCCCCCCTTTTTTTTTTTTTTTTGAAGATAACCATTCCTTTTTTTAAAGC chr4 + 94230402 35385190 35385189 35385314 35385190 35385189 35385314 125 ATTTTTTCTGTTTATCAACAACAAGATACTG-----------AAGTATCTGTCATTTCATAATCTACATGCCC---CCTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTTTAATGC .......:.x.:.x.x......x..x..x.x-----------...x..:.::...x.x.:.x...x:x.:..:---::::x...x..........:................xx.xx.x.x.x:..:.........x.. 31M11D31M3D63M 86/125 68.8% 125/94230402 0.0% 14/125 11.2% 55972602 NA +3200 chr4 + 190214555 91357846 91357845 91357921 76 TATAACACTCTTTTTACCTAAATTCTGCCTGCCCCCCCCCCCTTTTTTTTTTTTTTTTGAAGATAAC--CATTCCTTT chr4 + 94230402 13164718 13164717 13164788 13164718 13164717 13164788 71 TAGAACTCCCCTTTTTCCTA-------TTCACCCCCACCCCCTTTTTTTTTTTTTTTTAAAGACGACGACATTCTCTT ..x...x.:.:....x....-------::::.....x.....................:....::..--.....::.. 20M7D40M2I9M 54/69 78.3% 71/94230402 0.0% 9/69 13.0% 78193128 NA +3719 chr4 + 190214555 91374856 91374855 91374938 83 CATGGTGGTGCACACCTGTAGTACCAGCTACTTAGGAGGCTGATGCTGGAGAATTGCTTGAACCCAGTAGGCTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......x..........:::.......xx.:x.x...x::...........x..x:.x:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 15341659 NA +3236 chr4 + 190214555 91385947 91385946 91386029 83 CATGTGTATTTATACATACACACACACACATACATATATATGTATATGTACACTCACACACACAAATGCATACATATATGCTT chr4 + 94230402 54005691 54005690 54005773 54005691 54005690 54005773 83 CATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTT ...:..........:.....:.........:...x.x..x...x:xxx.:...xx.x.xx:...x...:...x:...xx.... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 37380256 NA +3194 chr4 + 190214555 91391918 91391917 91391993 76 ATATACATTTATGCACATATGTACATATACACATAAACATACATACATACAATACATATATATACACATATATAGA chr4 + 94230402 23247734 23247733 23247809 23247734 23247733 23247809 76 ACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAA .:.:.........x...........:.:.:...:.x...:.x:x.x.x.x:x.....:x...x.:.:......::. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 68144184 NA +10308 chr4 + 190214555 91393592 91393591 91393930 339 TTAATTTGTGTTGGTAAAATTTTGAGTGAGTGTGCTCT-----TGTAAACACCTGAGTGCTATTCAGCTTAATTGGGTTATAGCTCATCCTGATTGTGTTTTTCTCCTGCTGTATCTA-ATTTCTTTTTTTCAATATTTTATTGTTTGGTTTGAT-TTTGAAGGTGTATGGAAATTAAAGAACTCTAATTTTTTAAGAGCCCTAAAGGGAAGTATGCTTTCGTGTTAGTCATTCCTGTGAACACCTGTGCACTGTTGAATTTAATTGGGTTACAGCTGGTGCTGAGAGAGAGTCAACTAAATGAGGTTTTATAGACTGGCTAGAAA-CTTGACATTGCATGTCATTG chr4 + 94230402 37267699 37267698 37268017 37267699 37267698 37268017 319 TTGGTTTGTGTAGGTGAA-TCATGAGTACGTGTGTCCTCTAGTTGTAAGAG---AAAAGCTGTTAGATTTAATT---------CTTATTCAGATTGT--TATTATGCCATTTTCTCTATGTCCCCTTTTTTCAAT-----------CAGTTTGATGTTTAGAGACCTGAAGAAGTTAAGGAACTCTAATTTTCTCAGAACCGTAAAGGGAAGTTTGCTTT--TGTTACTCTTTTTTGGGAATACCTGTGCACTGCTAAGTTTTATTGGGCTACAGCTGGTGCCACTGATGTGTGCAGTGAGCAGGGCTTTATGGTCTGACTGGAAGTCTTGATATTATGTGTCATTG ..::.......x...:..-.:x.....:x.....::..-----.....:x:---:.:x...:..x:::......---------..:..:.x......--.x..x.x.:::.x.x....-:.::.:..........-----------::.......-...::..::x.:x:...:....:.............:.x...:..x...........x......--.....x..x..::..x...:............:.:.:...x......:............::xx::x.x..xx.x.:.::::..:.....:.x...:..:...:-.....:...:::........ 18M1D19M5I8M3D20M9D14M2D19M1I16M11D9M1I64M2D104M1I20M 221/311 71.1% 319/94230402 0.0% 36/311 11.6% 54125893 NA +6089 chr4 + 190214555 91393687 91393686 91393869 183 TTTCTCCTGCTGTATCTAATTTC---TTTTTTTCAATA---------TTTTATTGTTTGGTTTGATTTTGAAGGTGTATGGAAATTAAAGAACTCTAA---TTTTTTAAGAGCCCTAAAGGGAAGTATGCTTTCGTGTTA--GTCATTCCTGTGAACACCTGTGCACTGTTGAATTTAATTGGGTTACAGCTGGTGCTGA chr4 + 94230402 90440555 90440554 90440749 90440555 90440554 90440749 195 TTCCTCCTTTTGTAG--AACTTCAGGCTTTATTCACTAGGCttttctttttctttttttttctttttttCAAG---CATGACATTTAAATAGCAGTAAAAATTGTTAAGGAAGACTAAAGAGAGCACTGTTTTTGTGTTATAATCATTCCACTGAACACCTGTGAACTGTTGAGTTTAATTGGGTTACAGCTGGTGCTGA ..:.....x:....x--..:...---:...x....x..---------....x..x...xx.:.xx....x...---:...:x.x.....x.:.xx...---..x..x.:..:xx......:..:xxx..:...:......--:.......xx............x........:.......................... 15M2D6M3I12M9I26M3D22M3I39M2I58M 136/178 76.4% 195/94230402 0.0% 22/178 12.4% 953132 NA +3081 chr4 + 190214555 91404124 91404123 91404192 69 GGAGGGTGTATGTGTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTCTTTGCATAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x.:.:..:...:...:......x.......:....x.x::..:.xx...:.xx.x....:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 13557360 NA +16821 chr4 + 190214555 91406874 91406873 91407225 352 CAGAATTATTAATGAAAAAAACAACCTTTGTTTATTTGAATATTCTCACAACATGGCACATTGAAGATGTGTTTTATTTTAAACTCACATTTCATACCTAATATTGCAAAGCAGACAATCCTCACTGTAAGTATTATTTATTGATGCTTAAAACTTCAATGAATTATTCAGCCCCTTTAACCCTTCTTGCTTTGCTGCACACCTATTGAGTTTTCAGAGCAGTTTCATATCAATAAATTTGTTCTTGCTTTGCTGCTCCAATTTCATGCTTGGCCTTTCT-AAGTGACATACAAGAAAAATAAATAAATAGCTAGAAGGAATAAAATAAGTATACAAATTACTTTGAACAACT chr4 + 94230402 37272318 37272317 37272657 37272318 37272317 37272657 340 CAGAACTACTAATATAAAACAGATTCTTT---------AATGTTCTTATAATACAGTTTGGGGAGCATCTGTTTTCTTTTGTTTGTACACCTCACACCTACTGTTGCAAAACAGTCATTCTTCACTGTAAGTGTTATTTGTTGATGCTTAAAGGTTCAATGAATATATCAGCCCCTTTA-CCCTTCTTGCTTTGCTGCACAACTATTGAGCTTTCAGAGCAGAGTCATATCAATAAATTCTGACTTGCTTTACAGCTCCAATTTCATGCTTGGCCTTTCCAAAGATACATACAAGCAA---AAATAAATAACTGAAGGAGAAGAAAAATATGTTCAAATTGCTTTAGCAAACT .....:..:....:x....x.x.x:....---------...:....:.:..:.::.:x::xx..:x..x......x....:xx:x:...::...:.....x.:.......:...x..x..:...........:......:............:x..........xxx............-.....................x........:...........xx...............:xxx........:.x.........................:-...xx.........x..---.........:..::.:.::.x:...x.x:.:.x......:....::xx.... 29M9D141M1D100M1I17M3D52M 261/339 77.0% 340/94230402 0.0% 14/339 4.1% 54134556 NA +3463 chr4 + 190214555 91474766 91474765 91474854 89 TGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACATTGCCTTCCAAATTT chr4 + 94230402 85834541 85834540 85834629 85834541 85834540 85834629 89 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTT ...:.x.:.:.:.:.:.x.......xx..:..x::...:....:..x.:...:::x:.::......:........x....xxx:..... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 5640225 NA +3050 chr4 + 190214555 91474785 91474784 91474850 66 GTGTATATATATATATATATATATATATACACACACACACACACACACACACACATTGCCTTCCAA chr4 + 94230402 53944238 53944237 53944303 53944238 53944237 53944303 66 GTATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACAATGGCTGCTGA ..:....:x...:.x.x..x..x.....:..................:xx:....x..x..x.::. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 37530547 NA +3035 chr4 + 190214555 91474793 91474792 91474842 50 ATATATATATATATATATATACACACACACACACACACACACACACATTG chr4 + 94230402 85078510 85078509 85078559 85078510 85078509 85078559 50 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTG .......:.x....x......:................xx.x.x:..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 6396283 NA +3036 chr4 + 190214555 91474794 91474793 91474833 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 87065712 NA +3708 chr4 + 190214555 91489659 91489658 91489730 72 GCACTTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x:xx.x...x.............:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 15456453 NA +3238 chr4 + 190214555 91496555 91496554 91496707 153 ATAAATCTTGTATATATATATATATATATATACACGAATATATATTTGAATATATATATACACGAATATATAT----TTGAATATATATATATTCAATATATATTGAATA--TATATATATTCAATATATTTGAATATATATATATTCAATATATATAT chr4 + 94230402 56867292 56867291 56867443 56867292 56867291 56867443 152 ATACATATTGTGTGTGAATACATACACATATACACCAATATAT--TTGTGCATGTATATACAAGTATGTACACAATGTTGCA-----ATTTTTTCAGAACATGATAAATAATAACTGAGATACAGAGGACTCAGATATATCTATGGTGATTATGTGTGT ...x..x....:.:.:x...:...:.:........x.......--...x::..:........x.x..:..:.:----...x.-----..x.x....:x.:..:x.:....--x.:xx.x..x..:x:x.:.:::......x...:x.x.x...:.:.:. 43M2D28M4I5M5D23M2I47M 96/146 65.8% 152/94230402 0.0% 13/146 8.9% 34629263 NA +3002 chr4 + 190214555 91496583 91496582 91496641 59 TATACACGAATATATATTTGAATATATATATACACGAATATATATTTGAATATATATAT chr4 + 94230402 91331310 91331309 91331368 91331310 91331309 91331368 59 TATATACATATATATGATTACATACATATACACAAAATCATGCATTTGAATATATACAT ....:..:x......:x..:x...:.....:...x:.x:..::.............:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 165273 NA +3334 chr4 + 190214555 91497678 91497677 91497797 120 AAAATCGAAATTAGGATAGGATAGGTTTTCTTCAGTTTGACTTT----GTTTTTTAAAAAGACAAAACAGATGTATAGTATTCACTATTATATCAATCTTTAAAAAGTTATTAGTGACAGGACC chr4 + 94230402 37314334 37314333 37314449 37314334 37314333 37314449 116 AATATAGAATTTAAAAGAGGA-AGGTTTG----AGTTTTTCATTAATAGTTCTTTAT---GATAGAACAGATGGATTGGATTCATTATTTTGTGAATCTTTCAAAAGCTCTTAGTCTCCAGACC ..x..x...x...::.x....-......x----.....xx.x..----...:....x---..:.:........x..x.x.....:....x.:.x.......x.....:.x.....xx.x:.... 21M1D7M4D11M4I9M3D64M 84/112 75.0% 116/94230402 0.0% 12/112 10.7% 54183344 NA +3073 chr4 + 190214555 91504879 91504878 91504967 89 TTTGACATTTATTTCCTTTGTTCACTTTGTCTTTTTACCTCTCAAATTATTTTATTCTTTAAAAAAATTATTTTAAGTTCCTGGGTACA chr4 + 94230402 68834529 68834528 68834617 68834529 68834528 68834617 89 TTTGGTAATTATTTCAGTTTTTCACTTTTTATCGTGATTTCTCATTTTATTATTTTCTCTAGAGTAGGCCTTTTAAGGTCACAGGTATA ....::.x.......xx..x........x.x.:x.x.::.....xx.....x.x....:..:.:x.:x:x.......x..x::....:. 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 22670350 NA +10685 chr4 + 190214555 91529671 91529670 91530145 475 AACAGCTCATTAGATTGAGTAGCTGCAGGATAGATCTAAGCTATTCTCTTCCCTTCTCAGGAAGTC----TTTGATTTGTTTTGACCATCTAAGGAAAG-----TTAATAGATTTTTGTCTGTATATGTTCTCTCCTTTATTTCATCTCTGAAAAATGTTCTGATCATTAGCATTGACAGAACAAGTTGTAGATATTAACTAAAATCCACGTCAGAGGGAAGACACAGGGAATTTATTTACTTTCTGAATGTATATTACATATTTTCCCTGAAGCAATTTCATATCCCAGGAGTATTT--CTTCTCATTATGAACTATATCCATATGTGCTGAACACTGAAACTTGTGCAGATTTTTCAGAAATGGAAAGCATCTGAAGAAGCA-------AATGCTT--TTTAACAA----------ATATTATTGAGGTACCATACTTGAATATTA-----TTATTCTTA--CTCAAAATTAATCAATGAAACAGTTTATCTCTCAACGG--TAATGAAGAA chr4 + 94230402 37317551 37317550 37318047 37317551 37317550 37318047 497 AACCAGTCATTGGAATGAAAAGCCACCAGA--GCACTATGAAAATTACTTTCTTCGTGAGAAAATCATTGCTTGATTTTCCTTGATCTTGGCAGAATAGGCATTTTAAT-GACCTTTACTTGAGCTCAGTCTTTTCTGTGTCACACTTGTGATACATGTTCTGAATATTAGTATTGACAAGACAGGTTGTAGATATTTTCTCAAATCCATATTGGTGGGTAATGAGAGCAAATTTATTTACTTTTTGCATGTGCATTACATTTCTTCCCTGAAAC-ACTTCATATCTCAAGCGTGTTTTCCTCTCCATTATGAATCATTTTCATATCCAGTTAAGACTGAAACT--------GCTTTCCGAATTGAGAA-----TGAAAAAATAGAGAATCAATGtttaaaataataaaaataataataCATTTTTGAGGCAACAAACCTGTAAAACAAAGGCCTATTCACAAGATTTAAATGAATTGCTGCAAGAATTTCTTCTTCTATAGCTTGATGAGAAA ...x:x.....:..x...:x...::.x:..--.xx...x.xx.x.:x...:.:.:x.x..:..:..----:.......x::....:.x.xxx..:.x..-----.....-..::...:::..x::x::x...:.:..x.:.:x..::.x...x.x.........x:.....:.......::...:............xx..x.......::.::.x...x.:xx.x..x:..............:..x....::.......x.:.........:.-.:........:..:.x..:...--..:::.........::..x.:.....x::x.x..x.........--------x:....x...x..::..-----....:..::.-------....:..--xx...:..----------.:...x......:.x..x..:..x.x.x:.-----:.....x:.--x.:x....x...::x..x..x.:...x.:::..x.::.--.:....::.. 30M2D34M4I29M5I5M1D165M1D22M2I44M8D17M5D10M7I7M2I8M10I30M5I9M2I38M2I10M 306/458 66.8% 497/94230402 0.0% 56/458 12.2% 54212120 NA +3216 chr4 + 190214555 91549702 91549701 91549777 76 TGGTGCGCCTGTAATCCCAGCTACTTGGGGGACTGAGGCAGAAGGATCGCTTGAGCCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.x....:.:...........:::.:.....x.xx:x.:.x.:.....:..::.:..x.xx:..:..:.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 15516500 NA +3061 chr4 + 190214555 91594276 91594275 91594347 72 TATATATATATGTGTGTATATATGTATATGTATATGTGTATATATACATATATGTACACACATATATATACA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x.:.::::.:..x:.x.:...xx....:..:....:........:......:.x:....x:..::. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 49845180 NA +3164 chr4 + 190214555 91594295 91594294 91594417 123 ATATGTATATGTATATGTGTATATATACATATATGTACACACATATATATACATATATATACACATATATATACACATATATATACACACATATATACATATATACACATATATACACATATA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.x.x..x.::x.:.::..:.:.::x.x.:..x:.::.:x.....:...x:.:......x.:.:..:x..:..:...:..:x..::.x.x.:.::....:.::.::x....:..:::.:. 123M 68/123 55.3% 123/94230402 0.0% 0/123 0.0% 70485116 NA +3034 chr4 + 190214555 91594379 91594378 91594445 67 ACACACATATATACATATATACACATATATACACATATATATACATATATACATATACACACATATA chr4 + 94230402 22600198 22600197 22600264 22600198 22600197 22600264 67 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCA ..........x:....::.x......::.....x.x....:..:..x.:.:::.:..:.::...::. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 68994181 NA +3140 chr4 + 190214555 91594433 91594432 91594488 56 ATACACACATATATACATATATATACACACATATATACATATATATACATATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x......:.:.:....:x.:.......x........:.......::..x..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 17068359 NA +29824 chr4 + 190214555 91598502 91598501 91599749 1248 ACTCTGTATTGTATGTATGCTATGAAAGTGTTTTTTTAAGACATCTTTTTCTT-----TCTGTGTCTTACCATAGGCTACATATCGAAATCGAATTGTGAGCCAAAATCTCAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAGGACCGTTTTAGGTATTCGGCAGCGGACCAGACAAGCCCCTACAAAAACAAGACCTGTCAACTCCCAAGTCTCTGTTTAAGTAATTTCCTGAAGGACAAGGAACTAGCAGAAGTTATCAAACATTCAAGAGGAACTTATGAAACCCTCACTTCAGACGTTACACAGAACTTACGGGCCACCGTTGGGCAGAGCTCTCTGAAGCCAACAGCTAAGACAGAAGGGCTCTCCACGTTCTTAGAGAAACCAAAGGACCAAGTTGCTACGGCCCGACAGCATTCGACCTTTACAGGCAGGTTTGGACAGCCACCCAGAGGGCCAATCTCTTTACACATGTACAGCAGGAAGAATGTGTTTCTCCACCACAATTTACACAGCACTGAGCTGCAAACTCTAGGCCAGCAGGATGGGTAATTAAATCACCGTATTCCTGTCTTTGGGTAGGAT--------AAAGATGGTTAGTGTTTCTCGTGCATAGTTCA-TATTAAAATTGTCATGTACTTTTTCTTACATTTTAGTTATAAACAGAGTTGTGTTGTTGGGTTTTTTTTCTTAGTCATAAACAAAGACT-TGTGGGTTT--TTTTTTTCCA---------AGAGTGAAAGTTTGAGC----ATGTTAATTGAACTAGGTTGCATTGCCTTGAAGACTTTACTATATAGGTGTATAATAAATGGGACCATCATGATCGTTTATATAGTCCATAA-------------------TTTATTTATTTTTTATCTCTATCACT-------TACTGATATGCATTAAGG---TTTCAGAAGATAATATCAAATAGCAATCTGTTCACTGTTAATGGTGTTACTATAAAAGTAGACCTGATGAA-AAATAGATAAAGGAATTATAAAGAATTTTAAATTATATAATTAATAG------AAGGAGGAAAAAAGAGAAATGTTAACGTCTTATATTTGGTGGTATATTTATTTGAAGAATGTGGCTTGCTTGCATGTAACCTAGAGATGTG--------TTTGTCTCTATTACATACATTCAAG--CTCATCTTGTGATACTAGTAAGGGGGAAATGGCTGTATTTTTTTTCCTTTAAACGTTTAGTTCATACTAGTTCACAAAGGATTTCAGACAGAGTAATTGCTAGCCAAATAGAGAATGACAGCTCTGATCTTT chr4 + 94230402 37342030 37342029 37343274 37342030 37342029 37343274 1245 ACTCTCTGCCATTTTCCTGCTAAGATGTTCTGTTACTAAAACTTCTGTTTTTTGTTTGTTCGTTTGTTTCTCCAGGCTACATATCCAAACAGAATGGTGAGCCAAAATCTCAGCACAAGGGACAAAAAGTCAGCACATACTCCCACCGAGGACCCTTTTAGGTACTCA--AGCA-ACCAAGCAACGACCTATGAAAGCAAGAGCTGTCAACTGTCTAATTTGTGTCTGAGCAACATCCTGAAAGAGAAGGAGATAGTGGAAGTCATCAAGCATACTAGAGGAGCCTACGAAGCCCTCACTTCAGAGGCCACCCAGAATGGTTTGGCCACTGCAGCACCAAGCACAGCAAAGCCTGCATCTCAGACAGACCGCTACCCACTATTCTCAGGAGCTCCAAAAGACCATACTGCTGTACCTCAGCAGCACACCACTTTCACAGGCAGACTTGGACAGCCTCCGAGGGGACCCATCTCTTTACACATGTACAGCAGGAAAAATGTTTTCCTTCACCACAATTTACACACAGCAGAGCTGCAGACTTTAGGTCAACAAGATGGGTAGCAAGGTTCTTGTCTTCTTGCCATAGAATGGGAGTCCACTGAAAGGAAACATAA----GCTCACACAGAGCTGAGTAATAAGTT-----TTTACTTGCTGCTAC-CTTTACTTGaaaaaaaa-----------------------taaattaaaaattaaCATTGTCTAGGTTTCATACTTTCCCATCTGGAACTGTAGGAAAAGGATGAACTAGATTGCTAATT-AACTAGATTGATTTGTCACACAAAAGTCACTAC----TGGTAGAATAAATGGGACCGTTAGGCTGGCATTGCTGGTCCAAAATTGGCTAAGTGTTTTTTTGTTTGTTTGTTTTTTTCTTTTGTCTCTACAAAGCCACTAACATTCCCTGAAGTTCTTCTAGAAAGTGGTCTTAAATAATA--CCGTGTATGCTTAATAATGTTACTGTTAAAGTAGATGTGAGGAATGAATAGATACATAATTAGTAAACCCTATTGAATTACATAGAGACTAGGGAAATAAAGAGTAAGAAGGAAGTCTTTGAAGCTCTTAAACATACAGTGAAATTT--------------GCTCACTTGC---------AGAGGTGTGATACCACTTCTTGCTGTACACGTTATATCAAAGCCCTCATACTGCAAT-------TAGAGGAACTGAC-----ATTTCTTCATCTACAAGCAAAGATCATAGAGGCTCACTGGGTAATTGAATCAAAATAATTGAAACACAAAATAATGATGACAGCT-TGATTTCT .....x.::::.x.x:x.....x..x:x.x.x..x:...:..x...x...:..-----.::..x.x..x.:x:............x...:x....x............................:...:x..::....................x.........:..:--...:-....::...xxx....::...:.....x.........x:.x.:.:.x...:.:..:..:x.......:..x.....:x...::.....:.....:...x.x......:.:..:...:.............x.::..x.....:xxx:x......:.:x.x:.x:...x.xx::.....x:..x..x.......xx.x:x.:.xx::....:..:::xx.....:.....x::....:::x.:.::.....:x.x..:..:........::..........x..x..:..:..x..........................:.....x..:..:................xx:.x........:...:....:..:..:........::x.::.:x::..x...:..:.x.x.::.:...x--------..:..x:xx..:----x...:::..x..:.x.-..x...:x.-----.x.....x:.x:...-:....x..:x...x.:.-----------------------.x.:.:.x...:x..x.:.-.x.:.....--.x:...:...---------:x..x:....xx...:.----x..:.....-......:...xx...:.x::x.:.xx.:....:----xx...x.............:.:.x.x.x.:x.xxx.:.....x..-------------------...:...:......x::.:.:..x..-------:...:.:..x.x:.:.:.---..::....::.::.x.:.....::.--.:..x:.:xx.....::.......:.x........:x...x...-:........x.x:.x.x:....xxx.x..:.....:...:xx.x...------..:...x..:..:..::xx.x.x..xx.....x.:x.:xx.xx.x....--------------...::.....---------....:....--------.:.xx..x..:xxxx..:..:x...--.....x:..::..-------x:.:....x..:.-----x...:...x.:..x.x.:xx..x.....xx:.:....x::.x.x..x.:x..:.:......xx.xx....xx:.x:.........-....:.:. 53M5I110M2D4M1D419M8I12M4D16M1I9M5D15M1D17M23D19M1I9M2I10M9I17M4I9M1D33M4D45M19I26M7I18M3I25M2D44M1I47M6I49M14D10M9D9M8I25M2I13M7D13M5D85M1D8M 784/1169 67.1% 1245/94230402 0.0% 155/1169 13.3% 54256472 NA +30778 chr4 + 190214555 91600730 91600729 91602014 1285 TGGATATGTTGTACTTGTAATTTTGGTTTTCCAAAGGAACACACATGTGCATCAAGGCAGACATTTGCCAAATGTTTTCTTTCTTTGC-----------GTGTTTGTAATTC---TGCCAAAAGAGAACAATATACA--CTGCAAAT---TGCTTGACT--------TAATGA------------GATTGCCATCTAAAGTTCCCACCATACTTTGGAAGCTATAATGATCATGCAGATATACACTTTGGGCTGG-------------GCAATATTTAAGAA--ATGATAGGAAAATAGAAAAATCA-TGATTATTAATTGTGGAATTCAGCTTGATTTGTCCTAAATGTTGGTGTCTGTTGCTAGAGTATTTTAAATCTGTACATAAATAAGCATGATAAAATAATCAAGGAT-TTTTTCCCAGGATATG------------------------------------------------GAAGAACTATGTATCACAAA------------------------------------------TAATGTTTTTGATTTGGACTTT----------TGGAGTTGATAGTTTTGTTTTCCTGGAAGA-TAGACTTTTGAATTATACTTTATAAAAATAATCTATTTATA-----------------------------GAAGATCTGTCATTTAATAGACATTTTAAGAGATGTTTTAAACGCTAGTATTTTCTTGAAAAATCTTTTTTAAAGCTGAATCATTCAAAAGAAAAC-CTGGATTAAA---CAGTTCGATTTTAAAAGGAAGGGTATTTTTTGGAAATATCATCTTAAAGCTGTTTTGTATCAGTATTTTCAACATTGTTATAATATTATTTGTAATACTAAGTGTAACTCAGGCCTGGAGAAGG-TGTAAGCCCACTATGCTAAT-----GTACATCAGTAACTGTAAAACAGGGGTTCTTTGTAAGTTCCTCTTGTGTATATATAGTAACTTATAACAATGGCATGTGGGCATTCTTTCAGTGAATTGCTTTCTTTGTACT-AAAATCTCTAGTTTTCTAAGACAGTTCCATGTATAAAAATGATTTATGCATTTCTCCAAGGCGGTACATATCCAAAGACATGACACCAGGGGGAAAAAGTGCTTGTTTTTCTGATGGAAGCA--GTGGTCTTTTCTTTTCTTTCCTCTTTCTTTTGTGCATGTGTATGTGTAGCTAAGCCTAAATAACCCTGTAAAATTTCTGCTGCAAATT-------GTCTCTTCTGAATTTAGAATGTGTTTTAAAGGAACACTTAGGAAGA-GAAATACCTTGAAGAAAAGCTGTTTCCACCTGAAATAAACTGTTCCCATTTTTAT-----AATTA-TTGGAACATGAAACTGTATTTCTATGAACTCAATGATTTTTTTCCATAAAATTATATGCTAAGAGAGTCACCACAAAACTATGAATTCTCTCCCGAATTATTTTTGCTTCTTTGGAGCA chr4 + 94230402 37344544 37344543 37345976 37344544 37344543 37345976 1433 TAGATATGCTATGATGGTAATTTTGAGTGTCCTGAGCTGGATACATAAGGATCAGTATAAACATTTGCCAAACGTTTTTTGTTTTTTTTATATACATTTATGTGTGTATTGCCACTGCCAACATAGAAAGAAAAAAAAGTTGCAAACACAGAATTAACTATGGGTGTTAAAGACTCATAGGCCTGGACTGAAACTGATAGTTTAAACTCTACCA-AAAAGAAATAGTAATAACAGAATTTCACTATTAAGACTAGTGTTTTTCTCTTAGCACTCTCTTACAGTTATGGTAGATTGAAAGCACAGCTAGTTATTAATAACAATATATTTCAGTCTTGCTAATCTCAAGAGTTGATGTATGCAATTA---TATTTCAGATCTGTACATAAATTAATGT-ATATTGCAATCAAGGGTATTTTTTCCAGGACACAAGTACACAACTACATTTAaaaacaaaataattaaaaaaaaaaaaagaagaagaaccaaaacaaacaaaacaaaacaaacaaaacaaaacaacaacaaaaAAAGAGCACCACAACCTTTTTGATGCTAACTTTATACTGTATCTGTAGTTGGC-----TTTTTTCCTGGAAAAATGGACTTTTGGATTACATTTTATTAAAGAAATTCATCTACATATTTCaaaaaaaaaagaaaaaaagaaaaaaaga----------aaaagaaaaagaaaaaTACATTTTAAATGCTACTATTTTCTTGGAAAATCTTTTATAAAGCTGAAACTTAAAAAAAAAAACACTGGAAAAAAAAACAGTTCAATT--AAAGTGAGGAATATTTTT--AAAATGTCATCTTGAAACTGTTTTGTATCAGTATTTTCAGCACTGTTATG---TTATTTGTAATACTAAGTGTAAATCTCACCCAGAGGAGGATATTAGCCA--CATGTTAATATACAGTACAGCAGTACCTGTAAGACAGAGGTCCTTTGTTTGATCCTCTTGTGTATATACTAAATCATAAAGCAATGGCATGTGGACATTCTTTCATTGAATTGATTCCTTTGTACTAAAAATCTCTAGTTTTTTAAG--AGTTTCATGTAT-AAAATGATTTATACATTTGTCCAAGGCTGTATGTATCCAAAGACATGACACCAGGGGAAAAGACACATTATTTTTGCCACAGAAGTACCttttttttttctttttttttcttttttttttttttAAGTTTCTGTACA-TGAAGTATAA------CTGTAAAATTTCTACTGAAAATTTCTTCTCGTTACTTCTATATTT-TATGGTGTTATAGAGAGCATTTTAAGAAGGCGGAAATCCCCAAAGAAAAGCTATTTCCATTTGAGTCAG--TGTCCCGTTTTTTTTGAAGCAGTCACTTGGCACAAGAACCATTATG--TGTGCCCTAAATACTTTTT--------AATAATATG-------------TATGAAATGGTATATTGTCTTTATTATGATCCTTACTTCCCTAGAGTA .:......:.:.:x.x.........:x.x...x:..xx:x.:....:x.x....:x::.:............:.....:.x.:...x:-----------:...x....x.x.---......x.x....x:.x.x.x.--:......:---x:x..:...--------...x..------------..:..xx.::x.x....:xx..:x...:x-::...xx...:.:..x.::x.:x.x:..xx..x:.:..:.-------------...x.x.:.x.x.:--...:...:xx:.x..x.x.:::.-.x....x...:x:.:x.x.....::.x::.x:..::..:x....:...x..:x::..---.....:.:..............x.:::.-...xx::........:.-.....:......:.::------------------------------------------------.......:.x:xxxx.....------------------------------------------:..:x........x:x:.....----------..x.....::-----.x...........:.-.:........:....:.:.....x...:x...::..:..:.-----------------------------:....----------..x...x.xxxx..:.x.::.......:....x..........:..........x..........x.x.xx....:.....-.....xx...---......:...--...:x..:.::.......--:....:.......:..:......................:..:......:---......................x..xx:..::...:...-.:.x....x--:...:....-----.....x.....x......:....:...:......xx.x................:x:x.x.x..x.:.............:..........x.......x..:.........-...............:....--....:.......-............:.....x........x...::........................:...:.xxxx..:.....x:x.::....:.--x.xx.:.........:...:..:...:....x.x:.x..x.x...::.-:x...:x...------.............:...x.....-------..:x.....:x....-x.xx.....x..:..::xxx:...:....:-.:..xx..:::..........:......::...:x:.:--...:..xx.....x.-----.:.:.-....x...x...x.xx...x--.:..xx..x...:x.....--------...x.....-------------:.::...:x:.:x...x...::xxx..x..::..:....::.:...:. 88M11I13M3I22M2I8M3I9M8I6M12I29M1D40M13I14M2I23M1I57M3D28M1D17M1I16M48I20M42I22M10I10M5D15M1I41M29I5M10D81M1I10M3I10M2D18M2D50M3D39M1I9M2D9M5I112M1I20M2D12M1D87M2I48M1D10M6D23M7I15M1D30M1I38M2D15M5I5M1I20M2D19M8D9M13D48M 871/1220 71.4% 1433/94230402 0.0% 278/1220 22.8% 54256186 NA +3117 chr4 + 190214555 91610810 91610809 91610858 49 TTTCTCCCTCTCTCCCTCTCTCTCTCTTTTTTTTCTTTTTTGAGATGAA chr4 + 94230402 6554016 6554015 6554064 6554016 6554015 6554064 49 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAA ...x.:x:......:...................:.......:x.x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 85056794 NA +3156 chr4 + 190214555 91616580 91616579 91616631 52 GGTACAGAAGGAAAAAACTCAAAAACAAAACAAAACAAATAAAGGCCATGAA chr4 + 94230402 47541359 47541358 47541410 47541359 47541358 47541410 52 GATACTGAAGAAAAAAACTTAAAAATAAAATAAAACAAACAAAATCTATAGA .:...x....:........:.....:....:........:...:x.:..::. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 44075221 NA +3852 chr4 + 190214555 91673581 91673580 91673793 213 TAGACATTGGTTTTTTTTTTCCGTTGGCT------------CATATATCTTTTTACATA----CCCCTGTCCCTCCCTCCTCCCTCCCTCCCCTCCTCCCTTCCTCCTTTCCTCCTTTTTCTTATCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTT----CTTT------CTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCT chr4 + 94230402 19215328 19215327 19215566 19215328 19215327 19215566 239 TAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ..:.:x..x:....x....:::...:::.------------.x.x:.......x:.:..----...:x.:x..:x.xx..:...:.:.:....:..::::..::.::...xx.:..xx:xx..x.:.x..::...x.....:xxx:.:.x.x.::.:.xx::.:.:............x:.x.:....----...:------......::.x.:..x.x.:.....x....:.x.:... 29M12I18M4I125M4I4M6I37M 127/213 59.6% 239/94230402 0.0% 26/213 12.2% 72458253 NA +3963 chr4 + 190214555 91673648 91673647 91673821 174 CTCCCTCCCCTCCTCCCTTCCTCCTTTCCTCCTTTTTCTTATCTCTTTCTTTCTTTCTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTC-TTTCTTTCTTTTTCTTT---CTTTCTTT----CTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCT chr4 + 94230402 19215389 19215388 19215566 19215389 19215388 19215566 178 CTCCCTGGCACCCGCAACCCCCCCCTCCCCCCC---------CCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ......xx.x:..x.xx::..:..:.:..:..:---------.:....:...:...:.xx....-----......x..::...x......x.x....x.x....::x-:......:.x.......---.x.:....----...:::..xx:..:.....x:...x:x....:..x.:..:.x.:... 33M9D22M5I38M1I17M3I8M4I47M 111/165 67.3% 178/94230402 0.0% 22/165 13.3% 72458259 NA +3141 chr4 + 190214555 91673684 91673683 91673788 105 TCTTATCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTC chr4 + 94230402 30531207 30531206 30531311 30531207 30531206 30531311 105 TCATATCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTCC ..x.....x.....:..........x:xx.:.:..x.:.:x.:...:.x:xx.xxx....x..x::x..x..x:::::...x.....:..:...:.....:..:. 105M 65/105 61.9% 105/94230402 0.0% 0/105 0.0% 61142477 NA +3466 chr4 + 190214555 91673686 91673685 91673805 120 TTATCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTT-TTTTCTTTCTTTCTTTCT------TTTTCTTTCTTTCTTTCTTTCT--TTCCTTTCTTTCTTTCTTTCCTTTT chr4 + 94230402 37898147 37898146 37898272 37898147 37898146 37898272 126 TTACTTCTGTCTGCTTTTCTTTTTCTTTGTTTCTATCTTTC---ATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTTT ...::...x...x::.....:.......x.....x......---x.....:..:.-....xx....x.::..x.------.x..x.......xx.x......--.:x..x...:.:...x...:x.... 41M3D11M1I18M6I22M2I25M 86/117 73.5% 126/94230402 0.0% 12/117 10.3% 53775539 NA +4103 chr4 + 190214555 91673692 91673691 91673810 119 CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTT-TTTCTTTCTTTCTTT----CTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-.....:xx:x..:.:.....:....:.:...::.:.-....xx.....x.:.----.:...x....:.:x.xx.......:...::.....::..::........:x... 13M1D36M1I15M4I54M 82/118 69.5% 123/94230402 0.0% 6/118 5.1% 27976575 NA +3899 chr4 + 190214555 91673693 91673692 91673827 135 TTTCTTTCTTTCT-CTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTC-----------CTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCT--TTCTTTTTTC chr4 + 94230402 50176267 50176266 50176415 50176267 50176266 50176415 149 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC .....x...:x..-..:..:..::...:..:x.:.x::.x:.x..x.x..x........x.::..:x.x...x..:..x::...........-----------.:.:.::x:......x:..::.:...........--.:.x..:... 13M1I78M11I34M2I10M 90/135 66.7% 149/94230402 0.0% 14/135 10.4% 41497426 NA +3544 chr4 + 190214555 91673694 91673693 91673868 175 TTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTATT--------TCTTTTTTCTTTCTTTCTTTC------TTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCT chr4 + 94230402 5871310 5871309 5871502 5871310 5871309 5871502 193 TTTGTTACTCCCCTCTTTTTTGTTTTTTCTTTTAACAAATTGCTCTACTAAAACCGATGCCTTACCTTTGTTCATATCAAGCAACCGTTGCTTCTTT--TTCTGTCTCTCCAGCCTATCTTGCTCAGCCTTTTCTCTTGCCTGTTTGGCTCTCCTCATTTTTTCTTCCATTTCTCTTCTTTTGTTGTTTTCTTTT ..:x..x:.:.:..:.:...:x..:.......:------..x..:..:.--------.x::..x:....x..:x.x..------::x..x:......--....x...:...xx:..x....x..:xx.:...:..:..x::.x...xx:.:.:..:x:...:.....:x.:.:.........x..x...::..:. 33M6I10M8I21M6I13M2D96M 109/173 63.0% 193/94230402 0.0% 22/173 12.7% 85802384 NA +3912 chr4 + 190214555 91673696 91673695 91673864 169 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCT chr4 + 94230402 64726422 64726421 64726585 64726422 64726421 64726585 164 CCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCT--GATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTT--GTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTT-TCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT .:.x.x....::...x.:....x:.::xxx:.....--:x......x:...x.:::..x.xx....xxx.x.:..::.x...x:.x..x...--x.x..:.x..:..:........x.xxxx..:.......:..-.:..x.........:.:...:..:.:.....:. 36M2D54M2D41M1D33M 105/164 64.0% 164/94230402 0.0% 5/164 3.0% 26947274 NA +3560 chr4 + 190214555 91673726 91673725 91673843 118 CTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCC----TTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:x.:..:...::xx.x:.....:.:......:.:x..::.:.x....xx..:..x::..xxx:....x.....:.----.:..::.:::::..:...........:..:..:x.. 82M4I36M 73/118 61.9% 122/94230402 0.0% 4/118 3.4% 27976609 NA +3028 chr4 + 190214555 91673751 91673750 91673836 86 TTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCT chr4 + 94230402 11873168 11873167 11873253 11873168 11873167 11873253 86 TTTTGGCTTTCCTTTTCTTTCCCTCTTTTTTTCCTTCCTGTTTCCATTGCAGACAATTTTACCTTCATGTTTTTTTTTTTTTTCCT ..:.xx....:::........::.....:.......:..x.:.::x..x.xxx:xx:...x.:...x.x:......:...:..:.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 79800583 NA +3177 chr4 + 190214555 91673753 91673752 91673815 63 CTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTT chr4 + 94230402 6626809 6626808 6626871 6626809 6626808 6626871 63 CTTACTGTTTCTTCATCTTTCCCTGTCTTTCATACCTCTCTTTCTTTCCTCTGCCTCTTTTTT ...x..x......:x.:.:.::..x......x.x:..:............:.x...:..:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 85046944 NA +3020 chr4 + 190214555 91673792 91673791 91673896 105 CTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTTCTTCTTCTCT chr4 + 94230402 14546072 14546071 14546176 14546072 14546071 14546176 105 CCTCCTGTTTTCTTGCCCAGCTCTCATCTTTTCTTTCATCTGTCTCTTCTTTTTTTCCTTTCATCTGGTTTTTGCTTCTCTTGCTTTCATTCAGTGGTGTTCTCT .:.:..x.::.:..x.::xx..:..x.::...:..::x...x..........:....:.:.:x...xx...:.x::.x....x..:..x:..xx.xx.x...... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 77127720 NA +3111 chr4 + 190214555 91673807 91673806 91673886 80 CTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTT chr4 + 94230402 39929910 39929909 39929989 39929910 39929909 39929989 80 CTTTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTTGGCTTCCTTTCCTCTCCATGTCTTTCTCCCTCCCTTT ........::x..:.x....xxx.:xx.:.:..:...:...:.xx:..:...:::...::x..........:...:.... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 51743897 NA +3214 chr4 + 190214555 91673817 91673816 91673914 98 TTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTTCTTCTTCTCTTTTTCTTCTTTTTTGAGC chr4 + 94230402 49829840 49829839 49829933 49829840 49829839 49829933 94 TTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGT----TTTTTGGAGC ...::.x.xx...x:...:x.::x..........:............:....x..:::.:.:...:..:x.x:x:x.x....x.----.....x.... 84M4D10M 63/94 67.0% 94/94230402 0.0% 4/94 4.3% 41843977 NA +3040 chr4 + 190214555 91724598 91724597 91724645 48 ATATATATATATATATATACATACACACACACACACACTCATATACAT chr4 + 94230402 85078510 85078509 85078557 85078510 85078509 85078557 48 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCAT .......:.x....x....:...................x.x.x:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 6646088 NA +3216 chr4 + 190214555 91766604 91766603 91766676 73 GTGTACCTGTAGTTTCAGCCACTCCAGAGGCTCAGGTGGGAGACTCTCTTGAGCCCAGGAGTTTGAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...:..x.......:....:...:x.:.....x..x:xx.x..xx.x.....:.....:..:..x:.....:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 15733400 NA +3326 chr4 + 190214555 91782562 91782561 91782656 95 AGAAATATGCATATATATATATATATATATGCATATATATATATATATATATATATATATATATATGCATATATATATATATATGCATATATATA chr4 + 94230402 22303514 22303513 22303607 22303514 22303513 22303607 94 AGGAATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGC-TATTTATA ..:.....x:x..x.xx...:..::.x...:...xx..x...x......:.x.:..x.:...:..:...:.x.........xx...-...x.... 86M1D8M 66/94 70.2% 94/94230402 0.0% 1/94 1.1% 69479048 NA +3036 chr4 + 190214555 91782570 91782569 91782654 85 GCATATATATATATATATATATGCATATATATATATATATATATATATATATATATATGCATATATATATATATATGCATATATA chr4 + 94230402 21109217 21109216 21109301 21109217 21109216 21109301 85 GTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:..x.....:..:x:.:....:.x::.:..:x....::...:..:x:..::x.x.:..:....:.:...:x........::.:. 85M 52/85 61.2% 85/94230402 0.0% 0/85 0.0% 70673353 NA +3013 chr4 + 190214555 91782571 91782570 91782638 68 CATATATATATATATATATATGCATATATATATATATATATATATATATATATATATGCATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:..:.:..:..:.:....x::.:..:.x:..:...:.x......:......:xxx.......:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 45719273 NA +3195 chr4 + 190214555 91813342 91813341 91813389 48 AAAAACAAACAAACAAACAAAAAGATAGTAAAACACCTACAAAAAGAA chr4 + 94230402 33001615 33001614 33001662 33001615 33001614 33001662 48 AAAAACAAACAAACAAACAAAAAACCACTAAAGAACCTGTAAAAAGAA .......................:x:.x....:x....::........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 58811727 NA +3052 chr4 + 190214555 91858254 91858253 91858305 52 ATATATATATATATGTGTGTGTGTGTGTGTTTACATATATGTGTGTCTATAT chr4 + 94230402 55694457 55694456 55694508 55694457 55694456 55694508 52 ATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ..::...:...:.::.......:.....:..:x...:..:......x..... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 36163797 NA +3172 chr4 + 190214555 91882323 91882322 91882390 68 AGCATTGAATCTTCAGGTTCTTTTTTTTTTTTTTTTTTTTTTTGCCAAATTTGAAATTT---TCAGTCACT chr4 + 94230402 56135924 56135923 56135994 56135924 56135923 56135994 71 AGCAGCGGATCTGCAGTGCCTTTTTTTTTTTTTTTTTTTCCCTGCAAATTTTAAGTTTTGTCTCAGTAACT ....x:.:....x...xx:....................:::...x..x...:.:x...---.....x... 59M3I9M 52/68 76.5% 71/94230402 0.0% 3/68 4.4% 35746399 NA +3071 chr4 + 190214555 91889092 91889091 91889146 55 CATATACATATATATATACACACACACATGCACACACATATACATGTGCACATAT chr4 + 94230402 40730021 40730020 40730075 40730021 40730020 40730075 55 CATATGCAGATATATATGCACTCACACATGCACACGTATGTGCCTCTGCGTGTGT .....:..x........:...x.............::..:.:.x.x...:::.:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 51159071 NA +3427 chr4 + 190214555 91903214 91903213 91903283 70 CATGGTGGTACAAGCTTGTAGTCCCAGCTACTGGAGAGGCTGAGGCACGAGAATCACTAGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.....:..x.--......:.........x..:........x.x:.x...x....x.....::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 15870017 NA +3650 chr4 + 190214555 91911085 91911084 91911287 203 ATATTTAATTTTCATTACAGTT--CATGTGATATATATATATAATTCTCTCTTTAATCAGAGCTCAATCATGAGCCCTTGTTTAGATCATAGAAACAGACAAGACATTTTTCTATGTGGGATACAATGGCATTTCCACAGAGAGGCATCAGTCTTCTGATCTGTTTATTTGATTGCTTTAGCCCTTAAC------------CAGAAAACATCTGGCA chr4 + 94230402 37410928 37410927 37411139 37410928 37410927 37411139 212 ATATTTG--CTCCATTAAAGTTATCTTTGGATTTGTTTGTTTGTTTGTCT-TTGACTTAGACATCAGTCAGCAGCACTGCCTTTGATGGCTGAGTCTGTCT-GACATCTGTCTGGG-AAAATACAGTAAGCTTTCCACAGGGAGGCACCAGTCTGCTGGTTTGATTCTTTAAATTATACAGCCCCGAGCTGGGCGATATTACAGAAGACACTCAGCA ......:--:.:.....x....--.x.xx...x.:.x.:.x.:x..x...-..x.x.:...xx...:...xx...x..xx:..x...x::x..:x.x.x.x-.....:.x...:x.-:::.....:.::xx.........:......:......x...:.:..x..x...:.x.xx.x:.....:x.:.------------.....:...::::... 7M2D13M2I26M1D50M1D14M1D72M12I16M 128/198 64.6% 212/94230402 0.0% 19/198 9.6% 54500157 NA +3050 chr4 + 190214555 91911759 91911758 91911829 71 ACACATACACAGACACACACACACATATATACATATATATGCATAGTTGTATGTATAGACACACACAGATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .....:.:.:xx...::..x......::.....x.x.....:...x....:...:..x.::..::..x:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 69311561 NA +3462 chr4 + 190214555 91931046 91931045 91931123 78 TTTTCCTATTATTGCTTTGATCATTTCTTCCTTTTTTTTTCAATCTCTATTATTTCCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 49679058 49679057 49679135 49679058 49679057 49679135 78 TTTTCTTATTGTTGCTTTGATTTTATTGCCTTTTGTTTTTCAAGGTTTTTTAGTTGTTGTTTTTTGTTTGTTTGTTTT .....:....:..........:x.x.:x:.:...x........xx.:.x...x..x:.x......x...x...x.... 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 42251988 NA +3227 chr4 + 190214555 91931056 91931055 91931136 81 ATTGCTTTGATCATTTCTTCCTTTTTTTTTCAATCTCTATTATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 + 94230402 21393850 21393849 21393928 21393850 21393849 21393928 79 ACTGGTTTAGAAACTTCTCCTTTTGTCTT--GATCTTTATAAACTGCTCTTTTTTGTTTTTTTGTTTTTTTTTTGAGGGAG .:..x...::xx.:....:.:...x.:..--:....:...x.x:.x..:......x.......x.............:x.. 29M2D50M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 70537206 NA +3141 chr4 + 190214555 91931063 91931062 91931126 64 TGATC-ATTTCTTCCTTTTTTTTTCAATCTCTATTATTTCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63257027 63257026 63257091 63257027 63257026 63257091 65 TGATCGATTTCTTCCATTCTTTTCAGTGCTCCATTTTTTTCTTTTTTTCTTTTTTTAGTCTTTTT .....-.........x..:....:x:xx...:...x...:........:.......xx.:..... 5M1I59M 50/64 78.1% 65/94230402 0.0% 1/64 1.6% 28674036 NA +3078 chr4 + 190214555 91954361 91954360 91954409 49 TTGGATACCCAGCTCCTCCAGTCCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 32437256 32437255 32437304 32437256 32437255 32437304 49 TTGAACAGCCAGCTCCTCCTGGCTCTTCTTCTTCTTCTTTTTTTTTTTT ...:.:.x...........x.x.:...:..:..:..:............ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 59517105 NA +3744 chr4 + 190214555 91964057 91964056 91964186 130 ATATAATATAT-ATTATATATTATTATATATT-ATATATAATATATATAATATATATATAATATATATATATATTATATATTATATATTATATATATAATATATATATATTATATTATATATTATATATATA chr4 + 94230402 26320199 26320198 26320327 26320199 26320198 26320327 129 ATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAA---ATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA ...x.....x.-x......:.xx.:.x..:..-....x....xx::x...---..x...xx:.:..:......:..:...........xx......:.......x...xx.:...:xx...x.....x.x.. 11M1I20M1I17M3D79M 91/127 71.7% 129/94230402 0.0% 5/127 3.9% 65643858 NA +3162 chr4 + 190214555 91964164 91964163 91964210 47 TTATATTATATATTATATATATACACACACACATATACATATAAATT chr4 + 94230402 67665820 67665819 67665866 67665820 67665819 67665866 47 TTGTAATGTGTAATATATACATACACACACACACATATATATAAATT ..:..x.:.:..x......:.............:...:......... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 24298344 NA +3083 chr4 + 190214555 91966897 91966896 91966958 62 TATATAAATTTATCTACAAATACATATATGTGTGTGTGTATATATATATACACACACACACA chr4 + 94230402 37579499 37579498 37579560 37579499 37579498 37579560 62 TATATGGCTTTACCTTGGGCCATATATATGTGTGTGTATGTATATAAATGCACACGCATATA .....::x....:..xx::x:.:..............:.:......x..:.....:..:.:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 54387398 NA +5952 chr4 + 190214555 91967094 91967093 91967238 145 TGAATGGATAAGTGCTACATATGCACAATGTACATATACACATACATATACGTGTGTGTGTATATATACATACATGTATATATGTATATATATACATGTGTGTATATATACACACACACGTATATGTGTGTGTGTGTGTATATAT chr4 + 94230402 44243169 44243168 44243308 44243169 44243168 44243308 140 TGAAAAGTTCATTACATtatatatataatgtatatatatatata-atatata---atatatata-atgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT ....x:.x.x.x.:.xx:....::.:......:.....:.:...-.....::---:.:.:....-..:::.:::...:.....:..........:..:.::::.x.:.:............:.:.........x........... 44M1D7M3D9M1D80M 100/140 71.4% 140/94230402 0.0% 5/140 3.6% 47723925 NA +3042 chr4 + 190214555 91967109 91967108 91967170 62 TACATATGCACAATGTACATATACACATACATATACGTGTGTGTGTATATATACATACATGT chr4 + 94230402 32744969 32744968 32745030 32744969 32744968 32745030 62 TACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT .....x.:..x...:..x...:.:.......:.:.x.....::...:.:...::..::..:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 59222140 NA +3554 chr4 + 190214555 91967136 91967135 91967246 111 TACATATACGTGTGTGTG-TATATATACATACATGTATATATGTATATATATACATGTGTGTATATATACACACACACGTATATGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812949 89812948 89813060 89812949 89812948 89813060 112 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..:..:.xx....x....-:.....x.:.x.:....:.....x..x..::x.xx..:::...::.x.:x.x..::.:::.:.x:x...................:.x..x.. 18M1I93M 72/111 64.9% 112/94230402 0.0% 1/111 0.9% 2154187 NA +3063 chr4 + 190214555 91967148 91967147 91967202 55 TGTGTGTATATATACATACATGTATATATGTATATATATACATGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..:...:.....:.::...:...:.....x:x:..::.:............ 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 36272694 NA +3417 chr4 + 190214555 91967150 91967149 91967212 63 TGTGTATATATACATACATGTATATATGTATATATATACATGTGTGTATATATACACACACAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC .........::.:.:.....x..xx:.x...:..:..::.........:.:.:....:..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 44831973 NA +3566 chr4 + 190214555 91967177 91967176 91967240 64 GTATATATATACATGTGTGTATATATACACACACACGTATATGTGTGTGTGTGTGTATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..........:.......x....:.x:..:x....:....:...:.x.....x.:.....x.:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 15257586 NA +3104 chr4 + 190214555 91967189 91967188 91967265 77 ATGTGTGTATATATACACACACACGTATATGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATA chr4 + 94230402 41749091 41749090 41749167 41749091 41749090 41749167 77 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...xx.:....x.:.....:.:.x..x...:.xx..:....:....:....:...:..::.:::x.....x:..:.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 50218098 NA +3135 chr4 + 190214555 91999193 91999192 91999297 105 TATATTATATACTGTTATATATAACATATATATAAAACATTATATTACATACTATATATACTATGTAGTATATATTATATACTATAGTATATAATATATATTATA chr4 + 94230402 46018841 46018840 46018938 46018841 46018840 46018938 98 TATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA------GTCGTATGT-ATAGATATGATA ...:x.....:....x......:.:.x....:xx.x.:.x.....x.x.x.:x.....:.x..::...x........------:.x....:.-...x....x... 77M6D9M1D12M 70/98 71.4% 98/94230402 0.0% 7/98 7.1% 45980352 NA +3350 chr4 + 190214555 92006472 92006471 92006593 122 ATTTTAATCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 63697116 63697115 63697239 63697116 63697115 63697239 124 ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:....x..:.:--.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx:....x:..:..:x:xx.::..::..:..:..:..:...:.......::.x:.. 12M2I110M 73/122 59.8% 124/94230402 0.0% 2/122 1.6% 28309356 NA +3944 chr4 + 190214555 92006478 92006477 92006649 172 ATCTTTCTTTCTTTCTTTCTTTCTTTCT-------------TTCTTTCTTTCTTTC------------TTTCTTTCTTTCTTTCTTTTCT----TTCTTTCTTTTTCT---TTCTTTCCTTCCTTCCTTCCT-TCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTTCTTTTTTTTCTCTCTCTCTCTTTCTTTCTTTTATTTTT chr4 + 94230402 89682387 89682386 89682591 89682387 89682386 89682591 205 ATGTCCCTTGCTGCTTTTTTTTCTCTTTGGGGGGAATCTTGTTCACCCTCTCTTTCAAGGGACTTGATTCTGTTGATTTATCTCTATTTTAAAGTTCCTTATCTCTCTAGCTTCTTTTGTTTCTGCTTTCAGATCCTTTCCTCTTTCTTTCCTTCAGGGCCCTATTTCTCTTTGTTCTGTCTCTCATTTTCTGTGTCTGACATTT ..x.::...x..x::...:.....:.:.-------------...x::..:......------------.:.x..xx...x.:...x..:.----...:..x.:.:...---......:x..:..x.:...xx-.....:.:..:...........xxxx.:::x.....:...x....x......x:.....x.x.:.x.:x... 28M13I15M12I22M4I14M3I21M1I72M 117/172 68.0% 205/94230402 0.0% 33/172 19.2% 2324091 NA +3603 chr4 + 190214555 92006480 92006479 92006593 114 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:..xxx:....x:....::x:xx.:::.::..:..:..:..:...:.......:.. 18M5I96M 71/114 62.3% 119/94230402 0.0% 5/114 4.4% 28309363 NA +3378 chr4 + 190214555 92006497 92006496 92006635 139 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCT-------TTCCTTCCTTCCTTCTTTTCT-------TTTTTTTCTCTCTCTCTCTTTC chr4 + 94230402 67728277 67728276 67728429 67728277 67728276 67728429 153 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATC .....x:..x....:....xx:.::..:x.......x.x...x.x::.....:....:.::.x:x:.....::x:x..:..:...x..:x:..x:.-------:.x..x.:....::x.:....-------..:...:...x::.....:x.. 96M7I21M7I22M 86/139 61.9% 153/94230402 0.0% 14/139 10.1% 24278220 NA +3365 chr4 + 190214555 92006573 92006572 92006663 91 TTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTTCTTTTTTTTCTCTCTCTCTCTTTCTTTCTTTTATTTTTTCTTGAGACGCAGG chr4 + 94230402 94003856 94003855 94003946 94003856 94003855 94003946 91 TCCCTTCTCTTTTTCCTCTCTGTTTTAATTACTGTTTTTTTTTTTTCTCTCTCTCTCACATTTGTTATTCTGTCCTTAGATGAGGTGCAAG .:.....::.::.....:::.x::..xx..x..x:....:......:..........x.x..:x..x..:.:.::..xxx....::...:. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% -1997283 -92233119 +3032 chr4 + 190214555 92006615 92006614 92006663 49 TTTTTTCTCTCTCTCTCTTTCTTTCTTTTATTTTTTCTT--GAGACGCAGG chr4 + 94230402 759690 759689 759740 759690 759689 759740 51 TTTTTGCTCTCGCTCTTTTTCTTTCTTTTTTTTTTTCTTCAGAGAGGCAAG .....x.....x....:............x.........--....x...:. 39M2I10M 43/49 87.8% 51/94230402 0.0% 2/49 4.1% 91246925 NA +3989 chr4 + 190214555 92009267 92009266 92009354 88 TCTCCTATATATGTATATGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATATATACATATATACACACATATACAT chr4 + 94230402 85834528 85834527 85834615 85834528 85834527 85834615 88 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.::...x:..x.:.:.x...................xx..:.:x.:...:..:.:..x...:..::x...::.....:.:.:.... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% 6174739 NA +3800 chr4 + 190214555 92009274 92009273 92009355 82 TATATGTATATGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATATATACATATATACACACATATACATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x::.x.:...x...............:...xx....:x::...::...::.x...:.::.x...:........:...:. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 6174741 NA +3741 chr4 + 190214555 92009275 92009274 92009348 74 ATATGTATATGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATA----TATACATATATACACACAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x...:.x.................:.xx..:..x.::..:.......x.:.:.----...:..:.:.......... 55M4I19M 57/74 77.0% 78/94230402 0.0% 4/74 5.4% 6174737 NA +4253 chr4 + 190214555 92009276 92009275 92009359 84 TATGTATATGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATATATACATATATACACACATATACATACATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.....x.............:.:...xx:....x::..::...::..x......:.x..::....:.....:..... 84M 61/84 72.6% 84/94230402 0.0% 0/84 0.0% 6174743 NA +3877 chr4 + 190214555 92009322 92009321 92009494 173 TATACATATATACATAT----ATACACACATATACATACATGTATGTATACATATATATCATGTAAGTTAACACTTAATAAACTCCCATATATACATATATACATATATAAAATACATATACATTATATATATAAATTTATATATACTTTATATAT---ATGTATATGTATACACATATA chr4 + 94230402 63793565 63793564 63793743 63793565 63793564 63793743 179 TGTTCATATTTACATGTTCTAATTGTCTCATTTACATACATGAAGTCAGGAGCAATTAGTGTGAAAAAAAGCACATATAAAATTTGCATGTATGCATATCTATTCACATATAGCATGTGTATAAAATACGTATAAAGATACATGTAC-TCATGTATAAAATAGATATGTATTCATGTATA .:.x.....x.....:.----..xxx.x...x..........x.xx:.x:x::.xx..x::..x..:xx.:...x..xx...:.:x...:...:.....x..:x:.:...x.::.::.:..:.xx...::......xx..:..:...-.:..:...---..:x........x..::.... 17M4I126M1D8M3I21M 109/172 63.4% 179/94230402 0.0% 8/172 4.7% 28215757 NA +3404 chr4 + 190214555 92035368 92035367 92035472 105 TATTATAAAGGCCTTTAAATATATATATACACACACATACACATACACACATACAGACACACAAAGATTCTATAGCTTTTAGTTCAGTACTTTAGCCATGAGATA chr4 + 94230402 13482056 13482055 13482152 13482056 13482055 13482152 97 TATTTTAAAAGCTTAAAAATATATATATGCACACCCATACACATATATATTT--------AAAAAAATTGGATGGCTAGTGAGTGAGTGTGTTAGTGATGGAACA ....x....:..:.xx............:.....x..........:.:.:x.--------.x...:...xx..:...xx.::x.x...::x....:x...::.:. 52M8D45M 67/97 69.1% 97/94230402 0.0% 8/97 8.2% 78553312 NA +3273 chr4 + 190214555 92035731 92035730 92035814 84 GTCGTTCTCCTTGTTTTCACCTCATTCTTAGATTATTTGTTTCCCACT--GTTTTTTTGTTTGTTTGTTTTTTGGGGGGTCTTTTT chr4 + 94230402 69930253 69930252 69930337 69930253 69930252 69930337 85 GTCAGTCTCCT-GCTCTCAACCAATTTCTAAATACACTGTAGTGTATTTGGTTTTTTTGTTTGTTTGTTTTTTGGGGGTTTTTTTT ...:x......-.:.:...x.:x...::..:..xxx:...xx:x:.:.--............................x.:..... 11M1D36M2I36M 61/83 73.5% 85/94230402 0.0% 3/83 3.6% 22105478 NA +3068 chr4 + 190214555 92044780 92044779 92044828 49 TGTCTTTCTGTCTCTTCCTTTCTGTCTCTTCCTCTCTCTCTCTTTGCCT chr4 + 94230402 4618340 4618339 4618388 4618340 4618339 4618388 49 TGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCT ...:.....x...:x.x.:..x.x...................:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 87426440 NA +8842 chr4 + 190214555 92096136 92096135 92096669 534 ATCAATAGAGATAGTT-TTCTAAGAGTGACTAATTCTACCTAGTAATTTAAATAAGGCTTATGTTCAGAATGACTGATAAAGATTAAGTAAATGCTATGTAATATTTTGTACAATACT--GATGTTTT----GTTCTAATCACAC---------AGTTTAAGTGTGCATTTGCCAAAGGGGA----AGAAAGCACATTACCATTTTTGGATATGGATCTATCTAAAT--TTTTATAAGCATTT---TAATGCAGACATAAATA---------TATATGTATACCAAAAGCAAATGCAACTGAATATCATTCTGGCTGCCAAAAAAGCTGTAGGCAAGTACTATTGAAATTA-AAAATTAGACTTTAACCTCTAATGTATTTTTAAACATAATTAAAACATAAGAAACCAGCTGGGCTTATTATAGGTCCAGAA------------------------------------------------CCTTCTGAGTTAAA-------------CAGCATGTGTTAAACAAAAGA-------ATTCAATCATGCAGATTTTTT----------------TTATTTTTCTGTAACCTTATTCAGTAATATTTAATTTCCAACAAATACAGATTGCCAGCTGTTA-ACATCCTTTTACTGCA chr4 + 94230402 37429881 37429880 37430511 37429881 37429880 37430511 631 ATCAATGGAAGGAGGTGTTCTAGAAGTGGTGAATCTCTCCTG---CTTTGCTCTTGGTGTA-GTACAGAATTACTCATCAAAGC--ACTCAAAACTAGGCAAAATACCATACGATCTTCAAATATTTTTCATGTTTTGGCCACAACGGGCACTGAGCTACAGTATTCATTTTTGAACAGTGATTTCAAGAAGCTCATTGCTACTGCCTAATATCAGCACATTTATATACTCTGATATGCATGTGTGCTATGAAAACGGAAATAAAGTTTTGGGATTTTTATATCA-------------CTCAATGACTTTTTGGCAGC-AGAAAGGCTATTTGCACATAATATTGGAATCAGAAAATTAGATTTTAACCTCTAATGTCTTTTTAAACATAGCTAGCACATAAGTAAACAGCTGTGCTTATTGCAGATCCAGAATGCaataataataataaaaaaatataattGGAAGAAATTCCAAGGCGTTCCCCTGAGATGAATTCTTTAAGCTCCCAGCAAATG--AAGCAAGAGCCAGAACTACTCATTC-TCCAGACTTTGGCCCTATAAGACCAGAATTTTTGTTCTTTAACATTTGTCAGTAATATTTAGTGCCCAGGAAATGAGGATTGCCAGCTGCTACACATCACCTCACTGCA ......:..::x..x.-.....::....::x...:::x...:---x...:xx:xx..:x..-..x......x...x..x..:::--.x.x..x:...x.:..x..x:::...:..x:.--:..:....----...:.:::....x---------..:.xx...:.x.....x:x..x:.x..----.::....x....:.:.:.x::x:....x:::x:..:..x..--.:.x...x....x.---:x...x.:..:x.....---------x..x.x....:..-------------..x...:x.x..:....x..-.:...:...:.xx...x:..x.....:...:.-.........:...............x............::..:x.......x..x......x.......::..:.......------------------------------------------------:.::.....x.:..-------------.....x:..--..:...:..x-------.:...x..-.x....:...xx----------------..x..x....x....x..xx.............:.x:...:x....:x:............:..-.....x::.:...... 16M1I25M3D16M1D22M2D32M2I8M4I13M9I28M4I41M2I14M3I17M9I13M13D20M1D32M1I81M48I14M13I9M2D10M7I8M1D12M16I64M1I16M 352/511 68.9% 631/94230402 0.0% 143/511 28.0% 54666255 NA +17494 chr4 + 190214555 92101012 92101011 92101263 252 TTCCTATTCCCAACATAAAAGACAGCCATTCTGGCACAGATATAAAATTAGTTTTGCTCAATGGATTTCTTGTCATGCATGTGCACAAAGCTTCATTTACCTTCAATTTAGGCTTTTGTTTTCCTCTGGTGACTCATTTTGCTGCATCTGTGTTTGTTCTATAACCTGTGGATAAGGCATGTTTCTCTGGCAGGGAGCTGGCTGAGCACTTGCTGTAGGCTGCCATGTGTTAG-CAATTTTTGAATGCAGTTC chr4 + 94230402 37433201 37433200 37433453 37433201 37433200 37433453 253 TTCTTATTTTTAACATGCAAGACAGCTACTCCAGCATGGACATAAAATTAGTTTTGCTCAATGGGTTTCTTGTCATGCATGTGCAAAAAGCTTCATTTGTCTCCAATTTAAATTTTTGTTTTCCTCTGGTGACTCATTTTGCTGCATCTGTGTTTATTCTATAACCTGTGGATAAGGCATGTTTTCCTAGCTGGGAGCTGGCTGGGCTTTTGCTGATGACTGCCATGTGTTGGTTTAGTCTTGCATGCTATTC ...:....:::.....:x........:.:..::...::..:.......................:....................x............::..:.......:::..........................................:............................::..:..x............:..x:......xx.:............:.-:x.x.:...x....x:... 233M1I19M 212/252 84.1% 253/94230402 0.0% 1/252 0.4% 54667811 NA +3120 chr4 + 190214555 92103309 92103308 92103367 59 AACAAACAAACAAAAGAACATAGAGGGCAAAGAGTGAAAGATTTTTACAGGACAAATGT chr4 + 94230402 41236892 41236891 41236950 41236892 41236891 41236950 59 AACGAGCAAACAAAAAAATAGAGAGGGGAAAAAATGAAGGAGTTTTAAAAGTCAGTTGT ...:.:.........:..:.x......x...:.:....:..x.....x.:.x..:x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 50866417 NA +3224 chr4 + 190214555 92131637 92131636 92131707 71 CTCACCAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACATATATATATA chr4 + 94230402 74671048 74671047 74671117 74671048 74671047 74671117 70 cccaccacaAGAATATACAAAAATTAGC-TGTATATATATATATATACACACACACACACAAAAAAAAATA .:.....x..:..x.x.x.....xx.:x-.:..............................x.x.x.x... 28M1D42M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% 17460589 NA +3418 chr4 + 190214555 92131639 92131638 92131696 58 CACCAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACAC chr4 + 94230402 78347570 78347569 78347627 78347570 78347569 78347627 58 CAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACAC ..x.....x...x..:.......xx..:.:.xx..:...................... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 13784069 NA +3360 chr4 + 190214555 92131642 92131641 92131715 74 CAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACATATATATATATACTGCCT chr4 + 94230402 78281272 78281271 78281345 78281272 78281271 78281345 74 CAAAAGTATCTAAGGAAATGAGGTTATATGGGTGTATTAATACACACACACACATATATATATATAAATTGCCT .....:x.xxx..::...x:.::x.....:x:.:...xx...............:...........x.:..... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 13850370 NA +3121 chr4 + 190214555 92153466 92153465 92153519 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 2123390 NA +3282 chr4 + 190214555 92153466 92153465 92153521 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 90658466 NA +3496 chr4 + 190214555 92153468 92153467 92153523 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 90658468 NA +3253 chr4 + 190214555 92153470 92153469 92153522 53 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:....x..........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 90658470 NA +3269 chr4 + 190214555 92153475 92153474 92153529 55 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATTTCTT chr4 + 94230402 34623055 34623054 34623109 34623055 34623054 34623109 55 AAAAAAAAAAAACAGATTTTCTATATATATTGATATATGTATATACACATTTCTT ............x.:.x.x.x.........xx......:......:.:....... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 57530420 NA +3047 chr4 + 190214555 92154286 92154285 92154352 67 CTGGACCACAGGTGCATGCCACTATACCTGTCTTATTTATTTATTTATTTTATTTATTTATTTATTT chr4 + 94230402 26836869 26836868 26836935 26836869 26836868 26836935 67 CTGGCCCACACAAGAAGAGCACTGTCCCTGTCTTATTTATTTATTTATTTTTGTAATCTGTCTTTCT ....x.....x:x.x.x:x....:.x.........................xx.x..:.:.:.x.:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 65317417 NA +3010 chr4 + 190214555 92191724 92191723 92191815 92 ATACATAGATGAAAAAAGAAAGAAAAAGGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAGAAATAAAGAAAGG chr4 + 94230402 32170617 32170616 32170708 32170617 32170616 32170708 92 ATGCATAAAGGAAGAAAGGAAGAGCACCAGAAGTTCTGATAGAAAACAGAAGAGGTTAAAAAAAACAAACAAAAAAACCAAATGAAGAGAAG ..:....:.x...:....:....:x.xx::...xxxx..x.....:x.::.:..:xx:...:...x...x.......xx....:....:.:. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 60021107 NA +14760 chr4 + 190214555 92206878 92206877 92207506 629 CTAAACAACAAACTTGAAAATTGTTTCACAGCAAATGATAAGAGGG------CTTAAGGAGTCATTAAA---AGAGAGACTTAAGAATAAGTAGGAGGATAATGATGATTACCATTTAATCCTGGTTAATAATGCAAAGGTTAGAAGTCATATACAGTAACTTGCAGTGTATTATTTTAATGTTTTATTACTGTGATGGAAAGCATCTGACATAAAGATTGATTGGATGCAAGTCACCCCATCAACTCTTCTGTCGAAGTGGGTAAATCTC--TTTGAGAAGATATGTCTGCAGCCTGCCTGACTCTGACCTACTGTGTTGAGAACAACTGGACTATACCAGATGTGTTTCATTCTGCTTATTATTGTGACTCAGAAATGCTTTGATCTTACAAAACTTTAACTTTGAAGATTAGGCC---TGATGTGAAACAAGGAGCCATTATAAGGAATAAATTCCAAAGGCCTAGATACTCACACCTT--TAACATACAGATTTAGTAGGAGGAATTATATTTATAGAAACATGAAAATTAATTTGTTCCCCATAATTGAAGCAATGAACTATTT----------TTTAATGAATTCAGACTAATGATCTTAAAT--TATT-TTCTGATTGCGAAGAA---------TTTCTTTTTTAAAAGGCATATTTGAA chr4 + 94230402 37455023 37455022 37455661 37455023 37455022 37455661 639 CTACAGAACAGATTGAAAGGCTATT----AGCAAACAGAAGGAGGGAAGGGCTTAAAGGAGTCCTTCCATGCAGAGAGATTTAAAGATAAGCAGGAGGATAATGATAGTTAGAATATGATCTTAGAGCAGACTGCAGAGGCTAGGAGTTGCATATTGTATCTGCTAGTGTATTATGGTGATGATTCTTTTCTGTAATGGAAGGT-TCTGAAA-AAGGACTGATTTGGTCTGGATCACTCTATCAGC---TCTGGGGACGTGAATAGATTTCATTTTGAACAGATATTGTTG--ACTTGCCTGACTTGGACTGCTTGTGTCAAGTAAAACCCTCCTATGCCACATGTGTTTTATCCCAGTTCTTTCTATGACCTAGAAATACTTTGCTCACACAGAACTTTGACTTTGAAGAATATAACTTATAATGTGAGGAGAGGAAGTGCAATGTAGAGCAAGGCACAGATCCGTTGAGACTGAAACCTTGATAACTGAGAGA------AGAAAAAAGTACTTTGATACTCTTATGA-----------TTCTCTGTAATTGAAACATTGGCTCACTTGAGTTAGTGCTTCTATAAATTCAAGTGCACAATGTGAAGTGGCATTGTTCTCATGGGAAAGAAACAAGAAGTTGGCCTTCTAACAAGGTATATCCAAA ...x.x....:.:.x:..:::.:..----......:::x.:.....------:.x........x..xx.---.......:....::.....:..............::...xx..x.:...:.:.xxx.x.x....:...:...:...:::...:x...x..xx:..........xx.:...x..:x..x....:......:.:-.....x.-..:..:.....x.:.x::::....:.:....:.---....xx..x...::..:..:..--.....:x......xx:..--:.:.........:x...:xx:.....::..x.x...:xxx....:...x........:..:.::x..x..x:.:....::......:.....x..x:...:......:..........x..x:x.---.:......::x:....:x:::x..:x:..::..:x:x..:.xx.x.x..x...x.x.....--....xx.x...------..:.::..x..:x..x...xxxx:....-----------...:.::........:..x..:x::.:..----------..:x..:......:::xx.::..x.x..:.--:...-....x..x.x:.....---------.xx.:..:.x.x....:....:::.. 25M4D17M6I17M3I132M1D7M1D33M3D22M2I18M2D125M3I61M2I11M6D28M11D29M10I30M2I4M1I16M9I26M 397/601 66.1% 639/94230402 0.0% 66/601 11.0% 54751855 NA +4560 chr4 + 190214555 92227958 92227957 92228097 140 GGTCAATTTATTAAGTAATTATTGGTAATGAAATTTATGGTATTTTTATCTTATGGCTT--ATTTGATCTCCTCTTAAAGTTCACATGTAAATTGCCCCATTAATTTAATGTTCAATGTCATATTATTTGACATTAAATCTA chr4 + 94230402 37465107 37465106 37465239 37465107 37465106 37465239 133 GGTCAATTTCTTAAGTAGTAAGAGGTAATAAAACATAT---ATTTTTTCTTTACAGACAGAAATGAAGATATCATAAAAGTTCACCTGTAAATTGCACTATAAATTTTATGTGCAATGTCA------TTAGCATTAAATCCA .........x.......:.x.xx......:...:x...---......x::...::.x:x--.x.x:.xx.x::x.x.........x..........x.:..x.....x....x........------..::.........:. 38M3D18M2I60M6D15M 96/131 73.3% 133/94230402 0.0% 11/131 8.4% 54762851 NA +8880 chr4 + 190214555 92243211 92243210 92243532 322 CAAATACGAGGTATTTTTATTAAAAGCATTTATTTCAAAAAACATAACTTCTTACACTCATGCCAATGTTTGTGGCTTATTATCT-------TTGGTGCCAATTGCTAAAACAATCACTGATGTGTGATAAAGTGTTTATATATT-ATCAGTGATGTCACCTTAAAAGGGTGACATTGAGGTTTAAAGAAACCACCACATACATTACTCAAGGGAGGAACTGCTAATTAGCTAAGCTAAAGAGGG---ATTTCTTTCAACTTTGATTTTAGAAGTGCATTTTAGTA-ATCATTTCCATTTCAAAGTTACCAACTTTCCTTTGCAGTGCTTTTTT chr4 + 94230402 37474440 37474439 37474769 37474440 37474439 37474769 330 CAGATATACAATATTTATTTTGAAGAC---TCTTTTCATGTATTGCACCTGTCAAACTAACACTCCTGTTAGTGGTTTACTTACTCTCTTTCTTTGTTATAATCACTGAAACAAGAGCATACTTGTGATAATGGGTTTGTATGTGGATCAGTTGTGTCATCCTATAAGGGTGACATTGAAGTTAAAAGAAATGACTAGAGA-AGGACTCAGGGGAAGTGAAGCTAATTAGTCAAGTTAAAAAGGGATAATTCATTGCAGGCTTTGTTTTAGAAACACATTTCAAAGTTTCATTTCCACTCCAAAGTTGCAGACTGTAGCTTGCAGAACTATCTT ..:...::x::.....x.x..:..::.---.x...:x.x:x.:xxx..:.x.:.x...x.::.:xx....x....:...:.xx..-------..x..xx:...::..:......xx:.xx.:x........x.x....:...:.x-......x:.....:.:..x..............:...x.......:x..:.x.x.-.xx.....:....:.x:xx.........::...:....:....---...:x..x..:x:..x:........:::.....:.:x:-x.........:.:.......:.x:...x.xx:......x:..x.:.. 27M3D55M7I53M1I55M1D43M3I38M1I47M 210/318 66.0% 330/94230402 0.0% 16/318 5.0% 54768771 NA +13058 chr4 + 190214555 92293807 92293806 92294062 256 ATTGAATTTATCTTTAAAACCATCACAAATAATTTATCATGTTAGTTG-----TTTCCTCCTAGTCATATAATCAGATCTAATACTTCTGTCTTAATTTATGATGGAAATATTGTACAATAAAGAAAATGTCAACCATAATGATGCTGTTTGTCATGATAAAAAAACTATGGATCCAAATTCTGAGAAGAGAAAATTATGTTTAACGCATCAAATCATGATATTTCAGAGAGGTTATAACATTTACATTTATTCTGTACTT chr4 + 94230402 37495590 37495589 37495834 37495590 37495589 37495834 245 ATTGAGTT-ATCTTAAAAATCACCACAAATAATTTATCATGTTAGATAGGTACTTTCTTCCTTGCCCTGTCATCAGATCTAATGGCTCTTTCTTAATTTATGATAGAAATACTGTGGAATAAGGTAAATGCCAACTATAATGATGCTGTTTGTTATGATGAAAACA---------------CTGAGAGAAGGAAATTATGTTTAATGCATCAAAGCAAGAAGTTTCAAATAGGTTATTTCAGCTACCTTGATTTAGTATTT .....:..-.....x....:..:......................x.:-----....:....x.:.x.:.x............:x:...x..............:......:...:x.....:.x.....:....:.................:.....:....x.---------------......::..:.............:........x..x..x:.....:.x.......xx..x:...x..x...:x...:.. 8M1D39M5I113M15D80M 194/240 80.8% 245/94230402 0.0% 21/240 8.8% 54798217 NA +30544 chr4 + 190214555 92303253 92303252 92304825 1573 GAATTTCTATCAATAGAAAGGATTTCAGGAACCTTTCTCTATCCTGATTGCCTAAAAA---ATACACTGGAGACAGAAAAAAAAAA------TCATTGTATAAAAGGTAATTAGCACGTTCTCTCCTTTTTATAACTT-TATAATTGAAATCTCATTAAAAGCTTTCTAGGTCTG-TATTTCCCTAAGTGACCAGGTGTCCCTAATTTGTTTT------------------CAACCAATGTGACTAATTCCA--GGCAAAGACT----AGAAAAAGT------------------CTGATACCTGTTAGAGAATAGCAAGGTTAAATAAGTGGGGTGGCTTTTTTAGGTTGCATTTAACCTCGTAAAATAAAGAAAGGAAAA------AAAAAG--------------------------------CTTCAATGTCTTTTTA---------CAGTCCTGCCT------TTTTCTCAGTCCCGGTTGAAGATTCCATGGGAAATGAGAGCACTATTTTGTTTCTCCCTTGTATTGCAGATAGGGGGAGGAGGTGGTTATTAGAGAGAAG------CTCTTCCTCTCTTGGTTTCCCCCTCTCTCCGCCTGACAGCACCGCTCTCTCGCAGGCTCGCTCCTTCTCCTAGGTGATCCATTTCTAGGCAACGTG-GGGCTGGTGCTGAAGCTGCCAGGCTCGCTCCTTGCTTCCTGCATCCCGCCAGGCGAA--ACGCTCCAAAAGCATCCTGCAGCCTGCGGCGGCTTCCCTCCTCTG---GCCCGGCCCCGCTGCTCGCGCCCGGCGCAACCCCCCCGCCACCGCGCCCCAGCAAACCGGCTCCCCGGGCCCGCCTCGCCA----AGCTGCGTTCCGCGCCTC----------------------------ACGCAGAAAGGGAATTT---------------------TCTCTGCATTACTATCTGCATTACCTTGAAGTTCACTTTTTCTACCCCTCTTGGAGAGGGCTTTTTTCCCCCCTCCCTGGTGGAATCTGGCTGCTCCGTTTGGAATCTCCTAATCTTTCCTTT--CCACTTAGATTCTGGCAGCGAAGACCAGTGATTCTCTGCGGGCTGTAGGGG------CGGGGGCGGGGGTCTTTTTTGGTCCGAGAGGGTGCGGGGAAGGGGGCACATCCG---------GCGT------GAGGGGGGTGTTGGAAGTTGCAGC---GGAGCTGGGACCGG--AGACCCGCGGCCCCCGCGCAGCGATGGGTCTGATCTGAGCCCCAGCCTCTCCCCCTGCCCAAGAGCAGTAG-----AGGCTGGATATATTTTTCAAAAGCCAAACTGCAAACAACTCTGGCGATGCCAAAATTCCCCTCCAAGTGACACGGCTTTGCGAAGGAGGTTTCCTCAGGCTGGGCTCTTTCTGTCATTCCCTTCTGCCTTTCTCGGCGACGATAAAAGGCTTTGCTCTGGCAATAGGAATTTAGAAAAAAAGAAAAAGCTGCGCTAAACTCCACCGTGACCTCAAACTCTTTGGACTGTTTGAAAAAAAAAAAATT--GGAAGAAAATCCATCCTCCAAGAGAATCG-----------------GCATAGGAGGAGATGGAAGTTTTCCCCTTTCTCTTGGTTTTGTCCGTCTGGTGGTCTCGAACCTGGGACTCGGCGAATGCGGATTCGATCATTCACATCGGTAAGAAAGTGTT---------GGTGCAGCTCGTGGTTACTTTTACCGTTTCAGTTCTCAAATGTTTCCCCTTC----------GCTTTCCCCCTCTCCG chr4 + 94230402 37502787 37502786 37504489 37502787 37502786 37504489 1703 GAATGTTTTCCCATAGAAA--------------TTTCTCTAA------TACCTAAAGAGAGAAAGAAGGGGGAAAAAAAAAAAAAAGTAAATTCATTGCTTTAAAGAATAGTGACAA------TTCCATCAAGAACGCAGATAATTAAAATCATATTAATAGATTTTTAGGTCTTCTTTTTCCCCTTGAGGCCACATGTCCCTATTTTTTTTTTTTTTTCCTTTTCCCCTTCAAGCAGTGTCCCTGACTCAGTTGTCAAAGACCGAGAAGCAAAAGTGCCCATCCAGCTTTGAACTTGATACCTGCGGTGGAGTTACAAGGTTAAATAAATGGGATGGGTTTTTCTTCTT-CATTTTTTTTTTTTT--TAAGCTGAGCATAACACTTCAAAAAGATTTTTTTTTTTCCACCCTCCCCCCCCACTCCCTCCAATGTATTTTTAGGCTGCGTGCACTCCTGTCTATGTCTCTTCCTCAGTCCCAGTTGAAGATTTCAAGGGAGATGAGAGCTCTATTTTGTTTCTCCCTCGTATTGCAGATAGGGGGAGGAGGTGGTTATTAGAGAGAAGCGCGctcgctctctctctctgtttctccctctct--ggctgatagcacttatctctcgc--tctctctccttctcCTAGGTGATCCATTTCTAGGCAACGTGCTGGCTGGTGCCGGAGCCGCCAG----------CTCTCTCTGCATCCCACCA-GCAAAGGGAGCTCCGAAAGCAACCTGCAGACCATCATTGCTTTCTTCTGCCGCGCTCCGGGCACTCTTCCTCGC-TCCTGCCCTGTCCAACCACTACCTCGCGCGACAGAGACTGCACGCTGGGCTTCATTTGCAAATTTATCTGTTTTTTGCCCTTTTTTTTTTTTTTGGTTTGTTTTCCTCCAGTTGTGGGAAGCGATTTTTAAGCCAAGGGTGGGGGGAGATCTCTGCATTACTATCCGCATTACCTTGAAGTTCACTTTGTTTTTTGGCCTCCGGGGGGGCTTTT----------CCTGCAGGAATCTGGCTGCTGGCACCGGGATCGCCTGCCCTCCCGCTTCCCCACTCCTCCTCCCTCCCTGAAGGCGAGCTCTGTGCTGTGGGCTCCCGGGGCTCCTCCGGCCGAGAGGGTTcgttcgtgtgtgtgtgtgtgcgtgcgtgcgcgtgtgctcgtgtgtgcctgcgtgTCTGCGCGGTGTGGGTTGGAAGTTGCCGTGCAGCAGCCGGGACCGAGCGGCTCCCTGGACCCGGCGGAAGGATGGGGATGGTCTGACCGGCAGAGGCGGCTGCTGCCC----GCGGCGGCGCCCGGGCTCGATGGATTTGCTGCCGGCT---CTCCCAGCAACTCT---GCTGCCCGGGAGTCCTCCGAAGTGACGCGGGCTCTCGCCGAGG---------GGAGAGGCGCCCGGAGCCCCACGCTCGCCCCTCGCCCAGCCGC-------AGCCGTGCTCTTGCCAGCGGGATTTA------------------CGC---GCTCCTCCGGCACCTTAAACTC-TTGGGCTTCCTGCGCCGCGCCATCCTCCGCGGTGCCATCGTTTCGCCGAGAGAGCCGTCCTTACAAAGCCTGGAGCTCCGCCGGAGATGGAAGTTTTCTCCCTCATCCTGGTTGTGTCCGTCTGTTGGACTCGAACCTGGAAAGCCGCGATTGCAGATTCAATCATTCATATCGGTAAGGGGGTGCTGCGTCTGCCGGTGCCGC---TGGACACTT------TTTCAGCTCTCCTTTGCAACCTCCTCTGTGTTGGCAGGCTTCCCCCTCCCCG ....x.:.x:.x.......--------------........x------.:......:.---.x.x.xx..:..x.:..........------......:x.x....:xx.x.::..x------.:.:x.:x.x...x:-x......:.....x:.....x..x...:.......x-.x......:xx.x.:...x:........x...x....------------------...x..:...xx..:.:..x:--.x.......:----..x......------------------:.........:x:x:..:.x:.............:....:...x.....:xxx..-.....xx::.:x.xx--...:xx:..x.x..------......--------------------------------..:......x......---------..x.....:..------:..:.........:..........:..x....:........x.................:........................................------.x..::......:x.....:........--.x....:.....:xx........--x...x....................................-x.........:.:...:.....----------:x..::.........:...-..:..--:x.....:......x.......x.:::x::x....:.:..:x.:.---x..x...x.:x:.x.....-:..x..x.x::..xx..:.:...x...x.x.xx:.:x.x..x.x.:....::xx:.:..x.----.x...:x..::..x.:.:----------------------------x:.::.:...x..x...---------------------................:......................x.:.x::xx:..:x.:.:........----------....xx..............xxxx::..:...x...:x:..::.x:..--.....:xxx:..:xx.xx:....:.x..:xx.x:x...:.....x:x....------...xx.x.:....::x..:xx..x:.x.x.x.....x.x:x.x.x.::::::..---------....------.x..x.x.x............x.:---.x...:.......:--:.x:..x:..x...x...x.:x......xx..:.....x.xx...xxx.xx.:x......----..:.::.-----:....x...:x....x:::xx:..:---..x.x.:.......---.x....x:::xx:..::.x.......:...x:.:x..xx.::.---------..xx:...x.::xxx.:.x:x.x..:x:x...:x.:.:..x:.-------:..:x......x..x.xx..:.....------------------...---:....x...xx....:......-....:..x::..x:xx:x:xx.xx:.--.x::x:xx...xx.:.x..:.....::..-----------------..x:x.xx................:..:.:x..:.....x..........x...x...........:.xx.x....x...:.....:........:.........:::...:.---------.....x..---...x:....------......:....xxx..:xx..:.:..----------.x:.........:... 19M14D9M6D10M3I25M6I25M6D15M1I36M1I37M18I21M2I10M4I9M18I55M1D15M2D14M6I6M32I16M9I11M6I100M6I28M2D23M2D41M1I22M10D19M1D5M2I45M3I19M1D61M4I18M28I17M21I65M10D48M2I51M6I54M9I4M6I24M3I14M2I60M4D7M5I25M3D14M3D43M9D43M7D26M18D3M3D22M1D26M2I29M17I113M9I8M3D9M6D26M10I16M 1009/1461 69.1% 1703/94230402 0.0% 354/1461 24.2% 54800466 NA +27666 chr4 + 190214555 92307796 92307795 92308292 497 AAATGAATCACTTCCATTGTGATCTTCTTTGCCCCAATT----AAAGAAAGGTCT---TTTGACATATAAAAACTATGCAATTTTGAATTATGCTTCTACTTTGAGCCTATGCATTGATTGAGTAATTTCATCAGACCCACATTACTTGATTGCTTAGAAGTTTCCTAATGATCTGCATGCTGTAGGAAGAACCAAAAAGTCGTGAGTGGAATGGCAATGATACTGTGTTTTATGAGGCTATTCAGAAG-TCGCTCTGATTTATGTAGCTAGAAAGCTCCAAAGTCTTTGAGATTAGCCACGCTGACTGCTATTTTCTTCATACATCAGTCGTCCCACACTCTTTACTCCCTAAACACAACAGGAGTTTAGAGCACTGCTTTAATTCAGCAGGGATTAGGTGGCATTTCCAGTCAACTGCACAGTTTGTGTTTTGCTTCATA---TCAACTATGGAAGATCTCATGTTTTAACAGTTTAATATATGCTCCTTTCTTTATCTGGTTCCT chr4 + 94230402 37507774 37507773 37508275 37507774 37507773 37508275 502 AAACGAATCGAATCCACTGCAATTTTCCTCACCTCTGTATGTAAAAGAAAGGGGCAGGGTTACCATGTCAGAGCTGTGCGATTCTGTCTTGTGTTGCTCCCCTCAGCCCATGCATTGATTGAGTAATTTCATCAGCCCCACATTACTTGATTGCTTAGAAGTTTCTTAATGATCTGTATGCTGTAGGAAGAATGTGACAGTCGTGAGTGGAATGGCAATGATTTTGTGTTTTATGAGGCTATTCAAAAACTTGCTCTGATTTATGTAGCTGGAAAGCTCCAAAGTCTTTGAGATTAGCCACGCTGCCTGGTATTTTCTTCATACATCAGCCGTCCCACACTCCTCCCTCCCTA-----TACAGGAGTTTAGAACCCTGCTTTAATTAAGCAGGGATTAGGTGGCATTCCTTGTCAACTGCACAATTTGTG-TCTGCTTTGTGTTTTCTACAGTTGATGGTCTTGTGCTTTTATATTTTGTACTTTGCACTCATTCTCATTTTTTCCCT ...:.....:xx....:..::..:...:.::..:.x:.x----.........xx:---x..:x...:.x.:.:..:...:...:..xx..:..:.x..x.::.x....:..........................x.............................:..........:...............:xx:.x........................x:.....................:..:-.:..................:..................................x...x...................:............:.:x.......-----x.............:.x...........x....................:.:x............:......-.:.....::.:---..x..x:.x..x.:...::..:...x.:.x...:xxx.x...x.::x.::.:..:.xx.:... 39M4I12M3I191M1I103M5D72M1D11M3I63M 393/491 80.0% 502/94230402 0.0% 17/491 3.5% 54800022 NA +3129 chr4 + 190214555 92318274 92318273 92318325 52 TTGGATATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 23522763 23522762 23522814 23522763 23522762 23522814 52 TTGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTT ...::x:..::.......:..................::....::.x..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 68795511 NA +3007 chr4 + 190214555 92329939 92329938 92329996 58 AGAGAAGAGAGAGAGGGAAGAGAAAGGAGAAAAAGGAAGAGGAGTATGGGAGGAAAGA chr4 + 94230402 66803524 66803523 66803581 66803524 66803523 66803581 58 AAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGA .:..x.....:...:::..:.::...:..........:.:.x....x.x:....:... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 25526415 NA +3055 chr4 + 190214555 92385863 92385862 92385935 73 ATATATAATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGA-AATACACA chr4 + 94230402 46063290 46063289 46063363 46063290 46063289 46063363 74 ACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA .:..x..x:....:.....:::.....:..x.::::...x:..:...:.x......:.......:-....:.:. 65M1I8M 50/73 68.5% 74/94230402 0.0% 1/73 1.4% 46322573 NA +3070 chr4 + 190214555 92392408 92392407 92392468 61 GTGTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x....:.::..........::........x.xx.x...xx:.........:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 16359204 NA +8355 chr4 + 190214555 92394694 92394693 92394850 157 AACTTGAAAGAATTATTA--GTTTTCTATAATTATATGTGCTGTCAGTAAACATTTATTTTGATGTGAAATAATTACTATTTACAAGCCTTAATTGAAATAAATTTGTTTATGTAGATCTGTATACTTTTTTCCTACATAAGTTATTTTTAACAGCTAT chr4 + 94230402 37552751 37552750 37552908 37552751 37552750 37552908 158 AATTTGAAAGATTCATTAATGTTTTCTATAATTATATGTACTTTCAATAAAAAATTGTTTTTACTTGATATAATTACCATTTGCATGTTGTACTTGAAATAAATTTGCTTATGTAAATCAGAATACTTCTTAGC-ATATAAGCTACTTTTAATAGCCAT ..:........x.:....--...................:..x...:....x.x..:....x.:x...x........:....:..x.::x..x..............:.......:...x.x......:..xx.-.:.....:..:......:...:.. 18M2I114M1D24M 124/156 79.5% 158/94230402 0.0% 3/156 1.9% 54841943 NA +3294 chr4 + 190214555 92399598 92399597 92399688 91 TATTTCACAATTTAACTTTATTGGATAGAATAAAAGCA-----------GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACAT chr4 + 94230402 81889383 81889382 81889484 81889383 81889382 81889484 102 TAATTCACAGTATTATTCTAGTTAAGAAAATATAGGTATACTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACAT ..x......:.x.x.:.:..x.x:.x.:....x.:.:.-----------:::x..:......:.:x......:......:......x.x...:...:..... 38M11I53M 63/91 69.2% 102/94230402 0.0% 11/91 12.1% 10510215 NA +3776 chr4 + 190214555 92399632 92399631 92399731 100 AGCAGCTCTC-----TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATAC----------------ATACATGTGT---GTTTGTGTGCATGTGTATTTAATTAT-ATAAAATTT chr4 + 94230402 60831513 60831512 60831637 60831513 60831512 60831637 125 aacagttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCTCATAAGATCT .:...:..:.-----.x...x.....x.............:.:.......:.:....:..----------------......x.:.---..:....:........:.x..x..x.-....:..:. 10M5I45M16I10M3I26M1I9M 79/100 79.0% 125/94230402 0.0% 25/100 25.0% 31568119 NA +3049 chr4 + 190214555 92399640 92399639 92399685 46 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618362 4618361 4618407 4618362 4618361 4618407 46 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .......::..............x:....::......x.x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 87781278 NA +3010 chr4 + 190214555 92399642 92399641 92399716 75 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAT------------------ATACATACATGTG---TGTTTGTGTGCATGTGTATTT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTT ...x.....x.............x.:.......:.:....:------------------......x:..:..---...x:.::..::...:..... 41M18I13M3I21M 58/75 77.3% 96/94230402 0.0% 21/75 28.0% 31568112 NA +3172 chr4 + 190214555 92399646 92399645 92399714 69 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACATACATGTGTGTTTGT--GTGCATGTGTAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x...........x.:.:.......:.:......:...:.:::::..x.--:.:...x.:... 57M2I12M 50/69 72.5% 71/94230402 0.0% 2/69 2.9% 31568116 NA +3040 chr4 + 190214555 92408376 92408375 92408481 106 TGATGCCTTTGGCTTTGTGCTTTTTTTGCTTACAATTATATTGCCTATTCAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGTTGTTTTAAAT chr4 + 94230402 82090582 82090581 82090662 82090582 82090581 82090662 81 TGATACATTTAG--GTGTGATTTTTTTCCTT-----------------------CTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTTGTAAAT ....:.x...:.--x....x.......x...-----------------------::....::..:.x.....::.:......x..x..............x..... 12M2D17M23D52M 63/81 77.8% 81/94230402 0.0% 25/81 30.9% 10317794 NA +3059 chr4 + 190214555 92411620 92411619 92411677 58 TATGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834590 85834533 85834532 85834590 58 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATA ...x...x.....x.................:.xx:.:..x::...:....:..x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 6577087 NA +3182 chr4 + 190214555 92411626 92411625 92411692 67 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATG-------AAATATACCCACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.................:.xx:....x::...:....:..x...:...-------.x.:....x.... 54M7I13M 52/67 77.6% 74/94230402 0.0% 7/67 10.4% 6577085 NA +3080 chr4 + 190214555 92411629 92411628 92411686 58 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATG-AAATATA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx........:...:.::.:.::.:.:.-...:... 51M1I7M 44/58 75.9% 59/94230402 0.0% 1/58 1.7% 13146110 NA +3427 chr4 + 190214555 92415692 92415691 92415804 113 GTGTGTGCATGCGCATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCACATTTTCTTTATTCACTCATT chr4 + 94230402 39131745 39131744 39131856 39131745 39131744 39131856 112 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTATGTGCA-CACCTTCTCTCCATCCTCTCGCT .:..x..:.:..:x:...:.x...x.x.......:x.....:......x..x..::..x...x:.......:.xxxx.xxx...:.::.-...x..:...::..:.x...::. 89M1D23M 72/112 64.3% 112/94230402 0.0% 1/112 0.9% 53283947 NA +3581 chr4 + 190214555 92415705 92415704 92415780 76 CATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834537 85834536 85834612 85834537 85834536 85834612 76 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...x.:...x.................:.xx:...:x::...:....:..x...:..:.x...::.:.:...:.:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 6581168 NA +3398 chr4 + 190214555 92415706 92415705 92415780 75 ATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834534 85834533 85834608 85834534 85834533 85834608 75 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..x:..x.....x...............:.:.xx:.:..x::...:....:..x...:..:.x...::.:.:... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 6581172 NA +3250 chr4 + 190214555 92415707 92415706 92415775 69 TGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ....x:.:.......x...x...x.......:.:.:......x.:.xx.x:...x........::.:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 22321565 NA +3402 chr4 + 190214555 92415707 92415706 92415779 73 TGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834543 85834542 85834615 85834543 85834542 85834615 73 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.................:.xx:.:.:x.::..:....:..x...:..:.x...::.:.:...:.:.:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 6581164 NA +3897 chr4 + 190214555 92415707 92415706 92415792 86 TGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCAC-------ATTTTCTT chr4 + 94230402 85834541 85834540 85834633 85834541 85834540 85834633 93 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTT ...:.x.................:.xx....:x.:...:....:..x...:..:.x...::.:.:...:.:.:..x:.-------........ 78M7I8M 63/86 73.3% 93/94230402 0.0% 7/86 8.1% 6581166 NA +3191 chr4 + 190214555 92415711 92415710 92415788 78 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCACATTT chr4 + 94230402 79265520 79265519 79265597 79265520 79265519 79265597 78 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCT ............::........xx...:.:..:...:.::.:.::.:.:::.x.:....x.:.:.x:.:.x...x.:. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 13150191 NA +3780 chr4 + 190214555 92415711 92415710 92415786 76 TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCACAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA-CACAT .....x...................xx:....x::...:....:..x...:..:.x...::.:.:...:.-..... 70M1D5M 57/75 76.0% 75/94230402 0.0% 1/75 1.3% 6581170 NA +3255 chr4 + 190214555 92415714 92415713 92415789 76 GTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCACATTTT chr4 + 94230402 70094141 70094140 70094213 70094141 70094140 70094213 73 GTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATG---CACATTCT ....:x:.:.......x...x...x.....:.....:......x.:.xx.x:...x........:---......:. 65M3D8M 55/73 75.3% 73/94230402 0.0% 3/73 4.1% 22321573 NA +3324 chr4 + 190214555 92415715 92415714 92415781 67 TGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x.............:...:.xx..:..x::...:....:..x...:..:.x...::.:.:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 6581174 NA +3151 chr4 + 190214555 92415716 92415715 92415782 67 GTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATC chr4 + 94230402 79265519 79265518 79265585 79265519 79265518 79265585 67 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTC .............::...:....xx.:......:...:.::.:.::.:.:::.x.:....x.:.:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 13150197 NA +3002 chr4 + 190214555 92415718 92415717 92415781 64 GTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 79265519 79265518 79265582 79265519 79265518 79265582 64 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .............::.:......xx.:......:...:.::.:.::.:.:::.x.:....x.:. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 13150199 NA +3269 chr4 + 190214555 92415719 92415718 92415786 68 TGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATCACAT chr4 + 94230402 85834541 85834540 85834607 85834541 85834540 85834607 67 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA-CACAT .....x.........:.........xx..:..x::...:....:..x...:..:.x...::.-..... 62M1D5M 51/67 76.1% 67/94230402 0.0% 1/67 1.5% 6581178 NA +3096 chr4 + 190214555 92415720 92415719 92415779 60 GTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............:........:xx.:......:...:.::.:.::.:.:::.x.:.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 13150201 NA +3424 chr4 + 190214555 92457093 92457092 92457188 96 TCTTACCTTGAGGTCACTTTTTT---GGTCACTTTATTTTTTCTGTTTGTAATTTTTTGTTCTCTATTTTTACTATCC-TCTATCACCTCAGTTTTTGAC chr4 + 94230402 81344588 81344587 81344687 81344588 81344587 81344687 100 TTTGATTTTGTGTTCTTTTTTTTCATAGTCACTTTTTTTTTTTTTTTTCTGATTGTTTGTTTTCAATTTCTACTGCCTATCCATCAATTTGCCTTTTAAC .:.x.::...x.x..x:......---:........x......:.x...x.:...x......:..x....:....::.:-..:....x:.::x:....:.. 23M3I52M1I21M 67/96 69.8% 100/94230402 0.0% 4/96 4.2% 11112505 NA +3368 chr4 + 190214555 92485302 92485301 92485369 68 ATATATATATATATATATATATATATA----TATATATATATATATATATAGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 86234544 86234543 86234615 86234544 86234543 86234615 72 ATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTG ......x........xx.:..x...:.----...x.:..xx..x..:....:.........:.......... 27M4I41M 54/68 79.4% 72/94230402 0.0% 4/68 5.9% 6250758 NA +3107 chr4 + 190214555 92487736 92487735 92487799 64 TTAAATTGTTGTGGGTTTTTTGTTTGTTTGTTTGTTTGTTTATTTTTTCC--------TGCTACATAGTGTT chr4 + 94230402 27996695 27996694 27996766 27996695 27996694 27996766 72 TTGAACTGAGGTGAGGTTTTTGTTTGTTTGTTTGTTTTTTTCTTTCTTCTAGGCTTCATGCTTAATAATGTT ..:..:..xx...:.x.....................x...x...:...:--------....xx...:.... 50M8I14M 51/64 79.7% 72/94230402 0.0% 8/64 12.5% 64491041 NA +3220 chr4 + 190214555 92487748 92487747 92487786 39 GGGTTTTTTGTTTGTTTGTTTGTTTGTTTATTTTTTCCT chr4 + 94230402 15612118 15612117 15612156 15612118 15612117 15612156 39 GGGTTTTTTGTTTGTTTGTTTGTTTTGTTATTTTTTCCT .........................xx............ 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 76875630 NA +5737 chr4 + 190214555 92505020 92505019 92505261 242 TTTAAAAGAGAAAATGTAA-CTTAAGATGGTGCGAAGATGGCATCAAGTAGTAGAGTTAATCTACAAAACTTGAGAGCTTTTACACTACATAAACCATAGTGGCTTTTTGAATAGCCTCATAAAACGCAGTGTCATTGCCATTCTGCTCACAACATGTGGATTCTCTCTTCTGCAAATAGAATAGGACT----CTTGGAGCAATCA--TAATGTAAGCCCACTGAATTTTCTCATTTATTTTCTGTACT chr4 + 94230402 37597685 37597684 37597932 37597685 37597684 37597932 248 TTCAGAAGAGAAGGCATTATCCTCCTCTGTTATTAAAAAAGCAGCAGGCCATATGGATAATATCAAAGATCTAGAACCTTCTGAGCTTTGTATATTAT-GAACATTTCTGAATGGTCTTATAAAATACAATGTCATTGCCACTCTTCTCCAAGCATTTGGATTCTCCCTTCTCTGTGCAGATCATTACTAAACTGTGAAGTATTCAAGTTATGCAAGCCCAATGAAATGGCTCATTCCATCCCTGAACT ..:.:.......::::.x.-.:.xxxx..x.::x..:.x:...x..:.:x:..x:.x....x.xx..:.::.:::.x...:.:x:..x::..x.::..-.x:xx...:.....:.:..:......::..:...........:...x...xx.:...x.........:.....x::x::...x:.xx...----:x..:..:.x...--.x...:.......x....x.xx......:xx.::...x... 19M1I78M1D90M4I13M2I41M 149/241 61.8% 248/94230402 0.0% 8/241 3.3% 54907335 NA +9982 chr4 + 190214555 92566346 92566345 92566570 225 TCTAATTGCATTTAGAGAAATAAAATAAAGTTTGCCAACAAC--------------------------GAAAAAGGGGGACCAGAAAATTTGTTGACAGCATATCCAATGAACACAGTTTCGGACAATAGGATGCATGTTAAGCCTGACTGGATCTATTCATTCTCCTGTCAACAGCTGGCATGCCTCCTTCACAATGGCAGAAAAGCTACAGGAAGTTTCTCT---TTGGAAAACATGTTGAGAAATTTTCTT chr4 + 94230402 37636512 37636511 37636764 37636512 37636511 37636764 253 TCTAACTGAATTCAACAGGATGAGTGTAAGTT-GCCAACAACAGCAACAAAAGATGGTGATGGGGGAGGCAGGGGGAGAAATAGAAAATGTGTTGACAGTGTATCTGACCGACACAGCCCAAAACAATAGGATGCATGTTTAGCATGACTGGCTCTATTCATCCTCCTGTCAGCACTTGGCGTGCATGCTTCTCAAAGGCAGAAAAGCTGCAGGAAGTGTCTCTTCCTCACACAATATATAGAGAAATTTCCTT .....:..x...:.:x:::..:.:xxx.....-.........--------------------------.x.:::..:.:.x:.......x.........::....::.:x:......:::x::.................x...x.......x.........:.........:..x:....:...x.x....x...x............:........x.....---.::x.x..:..:.x.........:... 32M1D9M26I156M3I27M 167/224 74.6% 253/94230402 0.0% 30/224 13.4% 54929834 NA +3765 chr4 + 190214555 92588975 92588974 92589047 73 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCCGGAGAAGGGCTTGAACCCGGGAGGCGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x....:.:.........:.::........x..x.x....x:.........:.:..x:xx:..:..:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 16555771 NA +3276 chr4 + 190214555 92590116 92590115 92590186 71 TTCACTTCTTTCTAGGAGCAATTTTTGATGAATCTGCCAAAAAGGATGATGAGGTATTTCGCACTGCGGTT chr4 + 94230402 37655398 37655397 37655468 37655398 37655397 37655468 71 ttctttatttCCCAGGGGCGATTTTTGATGAATCAGCTAATAAGGATGGGGAAGTTCTTCGAATGGCACTT ...x:.x:..:.:...:..:..............x..:..x.......:x..:..x:....x.:x..:x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 54934718 NA +11488 chr4 + 190214555 92590130 92590129 92590323 194 GGAGCAATTTTTGATGAATCTGCCAAAAAGGATGATGAGGTATTTCGCACTGCGGTTGGTGACCTTAACCAGAATGAGGAGATCTTACAGACTGAGAAAATCACATTTTCAGTGACGTTTGTTGATGGCAACAACCCTTTCCAAGCAGTTCAAGAAGGTAAGGTCATCAGTATTTATTTTGGTTTTTTGGTTCA chr4 + 94230402 37655495 37655494 37655683 37655495 37655494 37655683 189 GGGGCGATTTTTGATGAATCAGCTAAAAAAGATGAGGAAGTTTTTCGAATGGCAGTTGCTGATCTCAACCAGAATGACGAAATCTTACAAACAGAGAAAATCACATGTTCAGTGACATTTGTGGATGGCAACAATCCATTTCAGGCAGTTCAAGAAGGTAGGAT-----GTTATTTTTTTGGTTTCTTTTTCCA ..:..:..............x..:.....:.....x..:..x.....x.:x..:....x...:..:...........x..:........:..x.............x.........:.....x...........:..x..:..:................:.:.-----..xx..x.........:..xx.:.. 164M5D25M 154/189 81.5% 189/94230402 0.0% 5/189 2.6% 54934635 NA +9561 chr4 + 190214555 92599184 92599183 92599473 290 TTTAAAATACCTTGTTACCATTT---CTGGGAAGTAGAGAAAGGCCATGGAGGCCAAATTAAAGCTTTCTGATGATTTGTGTAGGCTTAATACAATCGGTGAAGTAAATAAGGCGCTGAGTCATAGCTAAATGGAATTTGGCTGTAGAGCAACATAGTGTTGTAGGAGAGTGATATATATGAAGGTTGAATATAGAAATTAATTCAAGGAAAGCTTTATGCTTTGAAA-------------GATGGATCATCTCTGGCAAATTTATATCTGACATGATTGTTTAAAAGGTTATCTTTCCATGCTTT chr4 + 94230402 37661033 37661032 37661334 37661033 37661032 37661334 302 TTAAACAAACCTTTTTGTCATTCAGGTTAGTCACCAGAGTATGCTTACAGACACCAACTCAAGCCTTCATAATGGCTTTTGAAAGCTTATTGAGATCAGTGAAGTAAATAAGGCAGTGAGTCATAACTAAATGGTGTTCAGCTGTAGAATAACAGAGGTTTGTAGGGCAGCAATATGTATGAAGGTCACATGCAGGATTTTATTCAAGCAAAGTTTTATGGTCTGAAATTATGGCCTTATGGGTACATCTGCTTTGGC--CTTTGGGACT-AGATGAGTG-TAATAAGATTGTCCTTTCCTGTTTT ..x..x.x.....x..::....:---:.:.xx.x:....x.x.x::.::..x:....x.:..:x...:x.:...::..x..x.:.....x.:x:...:................:x.........:........x:..::........::....x..xx.......:x..::....:.........::x..::..:.x..x.......x....:......x.:.....-------------.:.:x...xx..:....--x...:x:x..-.x....x..-.x.x...:..:..:..:.x..:... 23M3I202M13I17M2D10M1D9M1D25M 197/286 68.9% 302/94230402 0.0% 20/286 7.0% 54938151 NA +3088 chr4 + 190214555 92600014 92600013 92600070 57 TACTTCATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 65759981 65759980 65760037 65759981 65759980 65760037 57 TACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA .....:.x:.x....x..:...:........:...:..:.x.:.:....:....:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 26840033 NA +3351 chr4 + 190214555 92600017 92600016 92600088 72 TTCATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834531 85834530 85834602 85834531 85834530 85834602 72 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ..:..x:..x.....x.............:.:...xx..:..x::...:....:..x...:..:.x...::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 6765486 NA +3546 chr4 + 190214555 92600017 92600016 92600088 72 TTCATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834539 85834538 85834610 85834539 85834538 85834610 72 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ..::...x.................:.xx..:..x::...:....:..x...:..:.x...::.:.:...:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 6765478 NA +3787 chr4 + 190214555 92600017 92600016 92600089 73 TTCATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834535 85834534 85834607 85834535 85834534 85834607 73 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .....x.:...x...................xx..:..x::...:....:..x...:..:.x...::.:.:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 6765482 NA +3051 chr4 + 190214555 92600019 92600018 92600086 68 CATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...::......:::.....:..x.:::..:.x:..:...:.x......:......:xxx.......:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 46536721 NA +3406 chr4 + 190214555 92600021 92600020 92600088 68 TGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834608 85834541 85834540 85834608 68 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ...:.x.................:.xx..:..x::...:....:..x...:..:.x...::.:.:... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 6765480 NA +3062 chr4 + 190214555 92600022 92600021 92600087 66 GTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ..:..........::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.:. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 13334503 NA +3235 chr4 + 190214555 92600024 92600023 92600087 64 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094147 70094146 70094210 70094147 70094146 70094210 64 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..:.......x...x...x.....:.....:......x.:.xx.x:...x........::.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 22505877 NA +3286 chr4 + 190214555 92600025 92600024 92600088 64 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834604 85834541 85834540 85834604 64 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA .....x...............:...xx..:..x::...:....:..x...:..:.x...::.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 6765484 NA +3071 chr4 + 190214555 92600028 92600027 92600083 56 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 68837095 68837094 68837150 68837095 68837094 68837150 56 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .....:.............:.:.:.x...:...:...:.:..::.:.:..x.x... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 23762933 NA +3101 chr4 + 190214555 92611003 92611002 92611081 79 TATTTATTGAATAGTCTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGT chr4 + 94230402 79265506 79265505 79265584 79265506 79265505 79265584 79 TATTCAGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ....:.x.x..:...x..........::........xx....xx.::...:.::.:..:::::.::x.:....x.:... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 13345497 NA +3304 chr4 + 190214555 92611006 92611005 92611094 89 TTATTGAATAGTCTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGTGTGTATATATATG chr4 + 94230402 85834528 85834527 85834616 85834528 85834527 85834616 89 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x..x.x.x:.:.....x.................:.x:x....x::...:..:...:x:.::..:.x...:::::::..:.:.:... 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 6776478 NA +3179 chr4 + 190214555 92611016 92611015 92611079 64 GTCTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATAT chr4 + 94230402 85834544 85834543 85834607 85834544 85834543 85834607 64 GTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ....................:.xx:.....x::..:....:..x:.:::...x...::.:.:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 6776472 NA +3426 chr4 + 190214555 92611017 92611016 92611175 159 TCTGTGTGTGTGTGTGTGTGTGTGTGTAGCT-------GTATATATATATGTGTGTGTGTATATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTTTTAGCCT chr4 + 94230402 89812911 89812910 89813062 89812911 89812910 89813062 152 TCTGTGTGT---TGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTG-----------GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCT .........---...:::::x.::..x...x-------..x.....:.xx....x....-----------.::.:..x...x..:.....:.:.x..x:..:x.xx..:::....::x::x.x::..:..:...x.x.............:.:.:...:.x.::.. 9M3D19M7I21M11D96M 92/145 63.4% 152/94230402 0.0% 21/145 14.5% 2798106 NA +3203 chr4 + 190214555 92611021 92611020 92611096 76 TGTGTGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGTGTGTATATATATGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x..................x:x:.:..x::...::.:...:x:..:..:.x....:::::...:.:.::.. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 6776480 NA +4054 chr4 + 190214555 92611022 92611021 92611155 134 GTGTGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTG----TGTATATATATATGTG-----------TGTATATATATG-----------TGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTGTGTGTGCATGTGTGTGT chr4 + 94230402 79265519 79265518 79265677 79265519 79265518 79265677 159 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGC-TCAGCACTTGTATTTATACATTTATGAGT .............::.......:..........:...:::.....----:.:.x.:....x....-----------.x......x...-----------.x..x.....:.x:..::.x.x...:x...:-.xx...:x...:.x.:.:...x.:..x.. 45M4I16M11I12M11I31M1D29M 96/133 72.2% 159/94230402 0.0% 27/133 20.3% 13345503 NA +3059 chr4 + 190214555 92611025 92611024 92611094 70 TGTGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGTGTGTATATATATG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCG--TGTGTATATACATTTGTATGCATCTGTATG ..x.:...:...:..:x...xx...x.:....:...:.--..........:..x...:..:..x.:.... 38M2D30M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 5977101 NA +3038 chr4 + 190214555 92611027 92611026 92611091 65 TGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGTGTGTATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx...:.::.x...x.:x..x................:.:.:.:.::..::...... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 65285535 NA +3591 chr4 + 190214555 92611027 92611026 92611170 144 TGTGTGTGTGTGTGTGTAGCTGTATATATATATGTGTGTGTGTATATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTTTT chr4 + 94230402 21109190 21109189 21109332 21109190 21109189 21109332 143 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACAGTTT ..:x.:.:::.......xx....:x:::...x.:.:...::x:.:.....:x:....::x....::.:...::x::.::x.x.....:.......:..x:.:......:::::.x.xx:.::-..x.x....x....:::x... 122M1D21M 81/143 56.6% 143/94230402 0.0% 1/143 0.7% 71501837 NA +3146 chr4 + 190214555 92611058 92611057 92611126 69 ATGTGTGTGTGTATATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.:...:..:::..x:...:...x.:....:...:......:....::.x...:.:::.x...:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 5977135 NA +3136 chr4 + 190214555 92611072 92611071 92611138 67 ATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:::....xx......:.:x..x::x.:x:...:...................::..:...:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 65285581 NA +3220 chr4 + 190214555 92611079 92611078 92611140 62 TGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTGTG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:...::..x:...:...x...:..:...:........:.:::.x...:.....x...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 5977149 NA +3240 chr4 + 190214555 92629761 92629760 92629848 88 TTTAAAATATGTTTTTTCTTTTTTTTTTTTCTTGTTCTTTACTGGGAAGAACAGGGAAGATAAAATTGTAGGTTTTATTCACAATAAC chr4 + 94230402 61853339 61853338 61853417 61853339 61853338 61853417 79 TTCAAAATATGCTTTTTCTTTTTCTTTTTTCTTTTGCCTTAC-AGTAAGAAAGGGG--------CTTTAAGGGGTTTTTCACAAAAAC ..:........:...........:.........x.x.:....-:.x.....x:...--------x..xx...xx..x.......x... 42M1D13M8D24M 62/79 78.5% 79/94230402 0.0% 9/79 11.4% 30776422 NA +3040 chr4 + 190214555 92642599 92642598 92642638 40 ATAGTCTTTTTGTTGTTGTTGTTTTTGTTGTTTTTTTTAA chr4 + 94230402 42515169 42515168 42515208 42515169 42515168 42515208 40 ACAGTTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTTTAA .:...:.......................x.x........ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 50127430 NA +9222 chr4 + 190214555 92644279 92644278 92644687 409 ATGTATTTATAGATTTATGCATACATATTTCAATTAATTTTCCTATTTGATATCAA-TATGCTTCTCCAAAGTAATAAATTAA--GTCTCACTAAAATAA-------ACAAGATGAAGAATTTGGAACAAAACCTCAAAGCCTCTCAAGAAAT-------TGTTTCTAGATTGTGAAGTAAATAGTTGTC---AGGCTGTAGCTCTCATTTTTATTCAGCTCTTATATTTGCCAGCTTTTGA-TGTTATGGCTATTAACTTTTATAGATGTCATACATTTTTATGTTAATCGTTCAGCTTTTTGTCTGGTGAGTAGCTAGACTTGTGTTCCTTGAACAAATTATATGAGCAA-------ATTACCACATGCCTTCAACATCTTTAAAAGGTTTTGTTTCCTGTTT---GTCATTTTAGAAT---TGATTTTTAAAATTAAGAA chr4 + 94230402 37677168 37677167 37677602 37677168 37677167 37677602 435 atgtgtacgtgtatatgtgtatatatatatatatTATTTTGTCTGTTGAAGAGGGACTGTGTTTCTATAACGTAATGAACTCACAGCACTGCTTAAATAATGTTCTGGCAGCATTAT--CTTTGGAGTAGAA-----AAACCTAGGGCGCAGTGTTGTGATGGGTATGGATTTCACAGTTACGAGGATTCTGAAGGCAAGAGCTTTCATTTTTATTCAGCTCTTATACTTGGCGGCTTTTAAGCGTTATGCCTATTAACTTTTATAGATGTCATACATTTTTATGTTAATGGTGGTGCTTTGAGTATAGTGAGAATCTCAACTTCTGCTCATCAAACTGG-CGTACAAGCAAAATTATGATGATGATGCTTCTTCAAAATGGTTAAAAAGCTGTTTTTATTGTTTAACGTCAATTCATTGCTTGTGATTATTGATGTTAAAAA ....:.x::.:x..x.:..:...:....x.xx....x...x:..:..x:.x.xx:.-.:..:....x:..x.....:..:.x.--.:x:::..x......-------:..:x..x.x--x......::.:..-----..:...xxx:x.x.:.-------..xx.x.:....x::x...x.xx..xxx..---....x:x....:......................:...x.:......:.-:......x.......................................x..xxx.....xx..x.:.....x.x..x:....x..:..x.::...x::-::..::.....-------..x.:x.:::x:......x..xx......:.:.x.x...x:.....---....x..:.xx::---.....x..:.x:....:.. 56M1I26M2I15M7I10M2D13M5D16M7I30M3I49M1I97M1D11M7I46M3I13M3I19M 271/401 67.6% 435/94230402 0.0% 42/401 10.5% 54967111 NA +3003 chr4 + 190214555 92653305 92653304 92653348 44 ACACACACACACACACATGTGTCTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 44243265 44243264 44243308 44243265 44243264 44243308 44 ACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT ...x.............:....x.........x.....:.:.:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 48410040 NA +3150 chr4 + 190214555 92653307 92653306 92653356 50 ACACACACACACACATGTGTCTGTGTGTGTGTGTGTGTGTGTTTGTGTGT chr4 + 94230402 44243269 44243268 44243318 44243269 44243268 44243318 50 ACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGATTTAGTGT ..............:.....x.......x.....:.:.:..x..xx.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 48410038 NA +3707 chr4 + 190214555 92658471 92658470 92658603 133 CTGAAGCCCCATTAGGTCTGGCCCAGACAGCATTTGTGTTTGGAAGAGCTAAGCAAATCACATTAATTAATGCTTACAATTTTCTTTGGTG-AAAGGTCCTGATGTCAGAGAGAAGACAGACATTTTCTTTTTT chr4 + 94230402 37682164 37682163 37682280 37682164 37682163 37682280 117 CTGAAGCCCCATTAGGTCTATCACAAATTGCCTATATGTTTGCTGGAGATTTGTAAATAACATTAA----------------TATTTGGTACAAAGAGTGTGTTGTCA-AGTGAAAACGGATATTTTTATATTT ...................:x.x..:.:x..x.x.:......xx:...x.xx.:....x.......----------------.x......:-....:x:x..x.....-..x...:..:..:.....:x.x... 66M16D9M1I16M1D25M 85/116 73.3% 117/94230402 0.0% 18/116 15.5% 54976307 NA +9751 chr4 + 190214555 92668021 92668020 92668378 358 AAATGCTGTCCTTATCCTTTCCTGATCATTAAATGTCATCA-GTGATAAAGCTTAAGTGAAGCAGTTTGTTAAGATGGAGGCTGT----TGGTACTGCTCTGTAGAATACAGGAGGTCAGATTCCACAGTGTCAAG-GAAAATCAA-GCTAATGGAGCAATTTAATTAAAATTAATTGAGTATAATTCTGTCTCTTAAGAATGAGATTGATGTAGGGTTATTTCCAGCT--TTTTTGGCTTAAGGTGAAA-----------TGAATGTCCATACTTTTTAATGTTATCTTCCTCAATCTTTTCCTATAATCATAGTTTTAACAAATAAT--AATGGTTTATAGAAGTTAGAAATGTAAAAGACCTATGAGGTTATTTAAG chr4 + 94230402 37689984 37689983 37690353 37689984 37689983 37690353 370 AGATGCTCTCTTTATCCTTTCCACTTCATCAG-TGAAACAACGTGATGAAATTTAAATGAGATTGTTTGTTATGATGGAGGCTCTACCTTTGTGCTAGCCCATAGTGTAGAACAGGTCAGACACTCCATTGTTATTTGAAAATCAGTGCTAATAGAGTAACTTAATTAAAATTAAGTGAGTATGATTCTGTCTCTTACATTTAAGATTGATGTA-GTTTATTTTCAGCTGCTTCTTTGCTTGAGGTTAAACTCGGCTTGCTTGAAGTCCTCTTTTCTTTCTTTATTTATTCTTTA--CTTCTCCTGAAA------GTCCATGAAATGGTTCAAAGGTTTGGTGAATTCAGGTTTGGGAAAGGCATACTAAGTCATCTCAG .:.....x..:...........xxx....:.:-..xx.:x.-.....:..::....:...:::x........x..........x.----.x..:..:x:.::...x:..x.:x........:x.:x..x...:.xx-........:-......:...:..:..............x.......:.............x:xx.:...........-.x......:.....--..:..x....:....x...-----------....xx:.:x.x:.:...xx.xx.x.x...:.:.--...:....:x..------x.::.xx....::.--..x.....:xx...x.:..:xx..x:....:.x..:x.:..:..:.x.. 32M1D8M1I43M4I47M1I9M1I67M1D14M2I19M11I34M2D12M6D14M2I49M 244/348 70.1% 370/94230402 0.0% 32/348 9.2% 54978037 NA +6846 chr4 + 190214555 92670109 92670108 92670233 125 TACTGAAAGAACAATAAATCATTAGCACCACAGGAGAGAGTTGTAGTAGCCTTTGATTAATCTATAATCTACCACTATTGCAATATTCTTTGTTAATGGAATTTTCAATTAGAATATTATTTGAA chr4 + 94230402 37691648 37691647 37691772 37691648 37691647 37691772 125 TACTGAAATACCAATGAACCATCAGCATGGTAAGAGAAAGTTGTAGAGACTTCTCATTAATCTGGAATACACCACTACTCCAATTTTTTTTGTTAATGGAATTTTGACTTAGATTGTCATTTGAA ........x.x....:..:...:....:x::.:....:........x::.:.:.x........:x...x:.......:.x....x..:.................x.x.....x.:.:....... 125M 95/125 76.0% 125/94230402 0.0% 0/125 0.0% 54978461 NA +12589 chr4 + 190214555 92686138 92686137 92686554 417 ATTAACATTGTAA-----CCCATTTAGTTAGCTGGAGGGAATTTCATTCCTGCTTAAATTCAAGCATTTA--AAGCCTCAAACTACTTAAAATTAAATTGGCCCCATAGAGAAAGCACATCACCATGAGTATTAC-TTAAAGATGGTATCAACCTTCAGG----------AATATATCTTAATTGGTAATGACAAAAAATAAATAATAA---------------TAAAATTTTAAATGCTATTTCTGTTATGTGGGAA----TTTTCTAGTTTTTTGGATGTTACAATTAAATATCCTTGC-TTAGTAGACATTTTTATAT-----ATCTCCAATGTTATCAAATGTCAGGTCTATCATGTATCAAAAGCAATCTCTTGGGTTGTGTTGCCTTGACAACAAATCTTGGTTTCGTTGTTC-TTGTTAAGTTGAATTCTTGGATTCTGAGAATTTAATAAAAC chr4 + 94230402 37697829 37697828 37698282 37697829 37697828 37698282 454 ATTAATGCTGTAATAAATCTTACTGAGTTAGCTGGAGGGAACACTGTTTTTGCTTAACTTCCAACATTTATCAAACTCTAAACTGCTAAAAATTAAATTGGGCCCTTAGAGATAGCACTTCCCTACCAGTGTTATGCTTAATCTGACACCAACATCCAGGGGTTATACTCAATATTGCTTGATTGGCATAAGTAAAAATCAAACTAAAAATTACATCACATTTCTAAAACATGAGATTTTATCTTTGCT-TATAGGCATTGCTTTCTCTGCTCATTAGAAATTAAAATTACAACTAGATGCATCAGTA-----TTCCATACAAATGATGCCTAATATTATCGACTGTCAGGTCTAACAGATATCAAAGGCAAT-TCTTGGCCCACGTTGCCTTGACAACACATTTTGGTTTTGGCCTTCTTTGTAAATTCAAACTCTTGAGTTCATAGAATTTAATTAAGC .....:::.....-----.::.:.x................:x:::..::.......x...x.:......--..:.:::.....:..x.............x...x......x.....x..x.:.:x...:...:-:.x..xx..::.:....x.:....----------.....xx...:.....:.xx:::.....x:...:x.x..---------------.....:x.x.:..x:...:.:..:.-.:.:..x.----...:::x.:.:x..:..x:...x.....x.xx.xxx...-.:....-----..::...:-----..x:.:...:.....:.x...........x..x:.......:.....-......x::::...............x..:.......:.x:x...-....x..x.::..:.....::...xx..........x..:. 13M5I52M2I63M1I24M10I39M15I25M1D8M4I39M1I6M5D8M5I47M1D45M1I41M 289/410 70.5% 454/94230402 0.0% 51/410 12.4% 54988309 NA +7924 chr4 + 190214555 92692258 92692257 92692552 295 TTTGGAATATT----------TCTGCTACAAGTAC--TACACTGTAGCACCTTGTCATTTTAAT--ATATGTCTTACTTTGTTATCAAAA--AATTAGGCATTATAAAATA-----TATTTTATCTTTTATATAGTCCATTTCACAGAATAGCCATAATGTTCTTTCAAGTAAGGATTATGGGAAATTAAATGCTCTTATGTTTAAAATAGATATTTATATCCTCTGTATCATTTATTAACTTATCAGAATCACTTTGCACTTT--AAGATCCATCTAAGTATACTTAATAATATAGCTTTTTCCATGCTTTTTTAAA chr4 + 94230402 37704544 37704543 37704849 37704544 37704543 37704849 306 TTTGAAATGTTCTGTGTACTCTGTGCTGCCTGTGCAGTATAATTTAGAAAGTTGCCATTTAAATCCACATATCTTACTGTGATATTAAGTGTATTTAAACCTCATAAAATGCCTCCTAATTTATTTTTCATTTAGTCCATTTAATAAAATAGCAGTAATGTTCTTTCAAGTGAAGGTTATGGAAGGAAAATTGCTCCTACTTTTAAAATACACTCCTCAATTTGCTGTACCATTTATTGCACTGCAGAAGTCA-TTTACCCTCTGGAACATTCACTTAG-----------AATAAAATTATTGCTAAATTTCTTTAAA ....:...:..----------.x....:.xx..:.--..:.x.x...x.xx...:.....x...--.:..:.......x..x...:..:x--.x...::.x.:.......:-----..x.....:...:..x..........x.:.:......x:................:.:.:......:.::xx..x.....:..:x.........x.:x::.xx..::x.....:........:xx:.::x::.:...-...:.x..:.--..x..:..::..:-----------....x.::.x..x.:.x::..:...... 11M10I14M2I27M2I24M2I19M5I137M1D10M2I13M11D28M 195/283 68.9% 306/94230402 0.0% 35/283 12.4% 54987714 NA +8506 chr4 + 190214555 92702011 92702010 92702616 606 GGTTTACAACCTCGATGTTGGATCAGGACATCCTAATGGTGTAGCTGCTATCAAGGGTTTGTTTGTTCAATGATTAA-AGTCCTACATGATCTGAGTTCAGACCGGAGCAATCCAGGTCAGTTTCTATCTATT-TTATTTTTCTCCCAGTATGAAAGGACGAGAGAAACAGGGCCCACTTCATAAAGCGCCCTCGCCCTATAGATGATATTATC--TTAAGCTAACAAATCACCTCATATCTT--------ACCCAAAAGTAGGGTTTGTTAAGGTGGCA----GAAGCCCGGTAATTGCATAAAATGTAAAACTTTATAATCAGAGGTTCAATGAATCTTCTTAACAACATGCCT---ATAATCAACCTCCTAC--------------TACTTATATCTACTCTGGCTGCCGTA-ACATTCCCTACACTCATTGAATGAAAAATTCTAGGCTACATACAACTATGCA------AAGGATCCAATATTTTAGGCCCCTATGGACTATTTCAACCATTTGCTGATGCAATAAAACTTTTCACTAAAGAGACC-----------CTAAAACCCTCATCATCT--------ACTGTTACCCTTTACACTATTGCTCC-AACCCTAGCCCTTTCTATTGCCCTTTTCTTATGAACCCCACT-----GCCTAAACC chr4 + 94230402 23356992 23356991 23357618 23356992 23356991 23357618 627 GGTTTATGACCTCGATATTGGACTGGGACAATCTAACAGTGCAGCTGCTAT-----------TCATTCCATGATTAACAGTCCTACACAATCTGAATCTAGACCAGAGTGATCCAGGACCATTTCTATCTATTAACACACTGCTCCTACTATGAAAGGAACACAAAAGTGGGGTCAATACTAT-GAGTGCAACCCCCTTCTAAGCAATGACTCCAATTCAACTGTTAAGAAGCCCTACATCCCCACTATAAACTCCTAGAAAGGGACTGACTGGCTAGCACAGTGGAGCTCAGCAAATGCAAAAAGCTTAAGCCCTT-TACCCAGAGGTTCAAATCCTCTCCCTTGC----TGCCCCAAATAGGAGATATCCTACTCTGATAAGCCACTTAATTATATC-------ACTATCATATATACTCCTCATCCTAATTG---------CTATGGCCTA---ACAATTTTTCATTCTACAAGTGTTAACTACTTGCA--------GGTCTACTCCAAACCATGGCAGATGGAGTCAAACTATTTGTTAAAAGAACCTATCCACCTGTCTGCCACCTCCTCCCCCTTCCTCTTCATTATAACCCATCTTAACCTTACTTTGAGCCCTCACCATTTGAATTCCCCTTCTGCCACAGTTCCCCCTTTCTGGCTTAAACC ......::........:.....:::.....x:....::...:.........-----------.::...x........-.........::......:.::.....:...::.......x.x:............-x:.:x:.x....:.x..........xx.x.:..:::...:.x.:x::..-:..:..xx:.x..:.x..::::..:x:x:.--..x.:..:x:..:xx:..::.:...::--------..:.xx.::x....x:..x:x:.x.:...----.:...:.:.:..x....x...::x...:x.:..-..x:...........xxxx...:.:.x:.----....:---...:xx:.:x......--------------..x.......-------:..::.:..-.:.:...::.:x..x....---------:.x.:.x...---....:.x.x..------...x:.:x.x..:..xx:--------..x...:.:...x.xx.x..x....x.:.x.....x..:::....:::...-----------..:xx...::.x:.x:..--------.:.:.x....x.:x:.x:x..:..::-.:....x:..x...xx...x.....:.x::.:::x:...x..-----..:...... 51M11D15M1I55M1I49M1D30M2I27M8I29M4I33M1D29M4D5M3I16M14I10M7D9M1I19M9D10M3D11M6I18M8D51M11I18M8I26M1I42M5I9M 356/562 63.3% 627/94230402 0.0% 109/562 19.4% 69345019 NA +3131 chr4 + 190214555 92712960 92712959 92713008 49 TTTTGGATTTGCATTTGACTTGACTTTTTCTTTTTTCTTTTTTTTTTTT chr4 + 94230402 49823025 49823024 49823073 49823025 49823024 49823073 49 TTTTGGACTAGCAATTGCCTTGACTTTTTTTTTTTTCTTTTCTGTTGTT .......:.x...x...x...........:...........:.x..x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 42889935 NA +13875 chr4 + 190214555 92765190 92765189 92765722 533 ACTTAGATAAAAATGGTATAAATCATTAATATAACATTTTTAATTCTTT---AGAAATTTAAAAATCTGGATGAAGAATGTTACAGAACACATGGAACTAATTTCAGAGGAAGGTCAGAAACATAAAAGCAAATTACTTGGACAAATCTGAGAACTATTTTTCATTAAAAATCGACGTCCAAACTCATCATTATATGCATTGTTATACACATATTTTATGGGTAAGGATAATGGAAATGCATTTGGAAGCTGTCGTTGATCTCCAGGAAGGACTGTTGCTGCTATTCAATGAAGCAGAGAGTTTGTCTGGCATGTGAGACAAGCTATTTTTTTTTTTTGAGTCCTGTGGACCATGCAGATAGTTGATAGCTTCTCACAGCCAGACTGACACTTTTTAGGTAGAGGTTTACTGTAGCATACAAGAAACAGTGACCT--GTGATACAGCCAAATGACTGCTAAAATGGTA-------TGAAAAGAGATTTCAACTCCCTATGGCACTGCTAATGTACCTGA-AAT---TTTTAAAGTGCATTTTAGTAGTT chr4 + 94230402 37736095 37736094 37736641 37736095 37736094 37736641 547 ATTTAAATAGAGACATTGTAAGTTACAAACATGACATCTGCCTTTCTTGGCAAGAGAACTGAGAACCTGGAATGAGAATGTTCTGGAACTATGGGGATTCAATTCAGAACAAGGTCAGAAACATAAAAGCAAATTACATAGGCTGGTCTGAACATTATTTTTCATTAAAAATCAGTGTCCGTGCTTACTCTTAGATGCAGTATTATGACCATATGTTAGGACTAAAGAAAAACAAAATACATTTGGAAATTGCCATTGATCTTTAATGAGTGTGCTGTCTGTGATTTAATGAAGCGTACAGCTTGTCCAGTTCATGAAGTGGAATG-GATTTTCACTGGGGACATGCTGACATGGCAAATGCTTGGTACATTTTAGCTTGTCTATTGTCATTTTTAAGGTAT-GGTTTATTGCCACATTTAAGATGATTTGACCTCCATAATGCAGCAACGTGACAAGTGGAAAAGAATTCCTGGTGAAAGGAAAATTTGACTAATTATTATAGCATTACTGTTATTGATGATTCATTTTAAACTGCATGTTGTTATTT .:...:...:.:.::x.:...:.:.:x..:..:....:.x:xx.....x---...:.x:.:.:..:.....xx:........x::....xxxx..:.:.x.x......:x...........................x.:.:.x::.....:x.:..................:::....:x:..:.::x...x.....x.:....:xx.....x...x.:x...:..x..xx:....:.........::..:.:.......::.:x:..x::xx.xx...:x...:........:x.x..:.....::.:x::...::::::x.:-xx....:x:.x.:.x.x..:x...xxx...:..:x...:..xx..:.x:.xxx:xx.:..x..:....x.....x-......:..:x:...x:....x:xxx......--:.:..:....x.x:....x:x.::..x:.x.-------.....:..:.x..::...xx:...x::.x:::..x...xx:...-:..---.......x.....x..:x..x.. 49M3I274M1D75M1D32M2I31M7I44M1I3M3I23M 333/531 62.7% 547/94230402 0.0% 18/531 3.4% 55029095 NA +3066 chr4 + 190214555 92774537 92774536 92774606 70 TGAATCAAGATATTCT--AATTTCTTCCAGAATTTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 31119176 31119175 31119247 31119176 31119175 31119247 72 TGAAACATGAAACTGTTGAGCTTCTTTCAGCATTTACCTTTTCTTTTTTTTTTTTTTTCCAATTTTGAAATA ....x..x..x.:.x.--.::.....:...x....x:....:................::xx......:.:. 16M2I54M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% 61655361 NA +3199 chr4 + 190214555 92781224 92781223 92781273 50 TGACAGAGCAAGACTCCCTCTCAAAAAAACAAAAACAAAAACATAACAAA chr4 + 94230402 61985613 61985612 61985662 61985613 61985612 61985662 50 TAGCAGAATTAGACACCCTCTCAAAAAAACAAAAACAAAAACCTGAGAAA .::....::x....x...........................x.:.x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 30795611 NA +3096 chr4 + 190214555 92788811 92788810 92788871 61 GTATTTTTATCTGATATTTTTAGTATTTTTTGTATGTTTTATAATAAACTTTTTGACAATT chr4 + 94230402 80434012 80434011 80434072 80434012 80434011 80434072 61 GTAACTTCATCTATTTTTTTTTGTTTTGTTTGTTTGTTTCATAATATACTTTTTGACTACT ...x:..:....:x.x.....x..x..x.....x.....:......x..........x.:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 12354799 NA +3063 chr4 + 190214555 92794869 92794868 92794950 82 TTGTTTTATATATATATATATATATATATATATATATACACACACACACACACACACATATCCTGTATACTTACAATAAAGT chr4 + 94230402 41650571 41650570 41650652 41650571 41650570 41650652 82 TTGTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGT ........xx:x..:..x.xxx..x.:...........:.:.:............::..x.:x..x:.xx..x....:x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 51144298 NA +3081 chr4 + 190214555 92794874 92794873 92794934 61 TTATATATATATATATATATATATATATATATACACACACACACACACACACATATCCTGT chr4 + 94230402 54005679 54005678 54005738 54005679 54005678 54005738 60 TTATAT-TGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGT ......-.:x.:.:....:...x........:.:.............x.x.:x.:...... 6M1D54M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% 38789195 NA +3164 chr4 + 190214555 92794887 92794886 92794931 45 TATATATATATATATATATACACACACACACACACACACATATCC chr4 + 94230402 4409082 4409081 4409126 4409082 4409081 4409126 45 TGTACATATATATATATATACACACACAGAGACACACACATTTTC .:..:.......................x.x..........x.:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 88385805 NA +3022 chr4 + 190214555 92815790 92815789 92815850 61 GTGTACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGAAAGATCACCTGAGTCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:..x......:...........::........x:xx:x::.x...:...::....:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 16782586 NA +3433 chr4 + 190214555 92815923 92815922 92816001 79 AAAAAAAAAAAAAAAAGGAAAGAAAAAAACAAAAAGCCAAAAAAAAACCAACCAAAAAAAAAACCCCTCACAAACAAAA chr4 + 94230402 28080793 28080792 28080869 28080793 28080792 28080869 77 AAAAAAAAAAAAAAAAGCAAAACAAATAACAACC--TTAGAAATAAACCCACCAAAAAAAAATCACTTTAAAAGTAGAA .................x...:x...x.....xx--::.:...x.....x............x.x.:.:.x..::.:.. 34M2D43M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 64735130 NA +5487 chr4 + 190214555 92839059 92839058 92839273 215 GTCTGAGAATGCTATGGCAGTGATTTTATAAGTCTTTCAAGCGAGCATGTGTAATTTTAGCATTTCTTGATGCATCCTTGAAGAACTGCTCTTTGGTGCTTTCAATCATTTTAATGAGGTATCTTAGTTTGATTTACAAATTTGGTAAACATGACTTGGTGTTGTTATGTTTAGACTTTGGTTCTTATTTCATACTGTGTGTTGTAAGAGTTCTT chr4 + 94230402 37772063 37772062 37772270 37772063 37772062 37772270 208 GTTTGAAGATCCAATTCCTGTTAAACTGAGAGCTTTTGAAGTAAGCATATGTATATTTAGAATTTACTGATGCTTCTTTGAAGAGCTGTTCTTGCACTCCGTGAATAGCTCTAATGAGTTTCCTTAGTTTGATTTAGAAACATAG----CACAGCTCAATGCTAT--TGTAAAGACTGCAGGTA-TGTTTCATAATACACATTATGGAAATGTTT ..:...::..x.x..xx.x..x.xx:.:x:..::...x...::.....:....xx.....x....x:......x..:.......:...:....xx::x.:x.x...x::.:.......x.x:..............x...:x.:.----..:::..:::..:.:.--...xx.....x::.x.x-.:.......x.:::::..:.:::.:.x:.. 145M4D16M2D17M1D30M 130/208 62.5% 208/94230402 0.0% 7/208 3.4% 55066996 NA +3516 chr4 + 190214555 92875132 92875131 92875209 78 AAATATTAACTCAAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCGAGACGGAGTCTCACACTGTTGCCCGGGTT chr4 + 94230402 87283416 87283415 87283490 87283416 87283415 87283490 75 AAAGATTAAATAAAAGGGCTTTTTTTTTCTTTTTCCTTTTTTTTCCCCGagg-gacacctcccac--ttgaccaggtt ...x.....x.x...:..:.........:.....::........:......:-.:x::...x...--...x..:.... 52M1D12M2D11M 58/75 77.3% 75/94230402 0.0% 3/75 4.0% 5591716 NA +8743 chr4 + 190214555 92924540 92924539 92925516 977 AAAATTATCTTCCAAAACACTGCTGCATGG--ACAAACCATAGAGCACTAAATCTTGTAGATAGATCGGTCCATGCCATGCTGTTGCATGAGGTTATATTTTTCTAGTTACATTCACTGCATCATAGCCTGGAGAACAAAAACACAGCATGACAACATATGCCATGTCTCTAAACCA-TGCATCTTTAAGAGTCT-------GATATTCAGCCTTTCATTCATTTACCTTCCTTGTTAGCCTTTCATTTAACACTGATTAAAATACTTCAAATGATTAATTATTGCACATTTTTGCCTGATTTATCACAGCTCAGCAATAAGATCCTTTGTTGTAGCTTCATCATATTAA---------TGTGGAAGCTGTTAATGTGAGATAATATTACAAACTCTTCTGTTTCTGACCTGCTTTTCTTAGTTC-CTATCTTCTTT---------------ACCTGAGATCCATCACTTAAAACAGCCT------------------TTCCCCAAAGGTAAGCAGCCCTCTTTAAGAGTCTTGCCACATTTTAACATATGAA--TTAATCTAAGCAAGGGTCCAGAATAAAATAACACGTGGTGTCTTTGCTCAACTAGGTTAGTTTTCCAC-ACCTTCCTGTAACAT-TA---TCAGCAGAAGT--------CATTCACACATAAAGCA--------ACGACCTCAAAATTAAAAAGTTACTTTGGATAAAATTCATTTTATTGTGTAATCTGGGTA-----TTCCTTCTCTGTCTCTCCTTTCACCCCCACCATGGGACTTTAAAAAAGTAAGTTGTAATGCTGAGATTTCTGTGTCAAGGTTAAAGAGTGAAGAGAATCATTTCAGAGATTAGAGGTGTCACTCATGTCAAGAAACATTATAAGAGATCTCTGGAGGCATGTACCAACATATTAAATTACTACATGGAAAAATAAATTGAAAAAGAAAAGCCCTGAAGTAA-----TGAAAGCTGAC----TACATTTTCAAAGCAACTACTATTTTAAGAAGAGTATATTTCCTTTATCCACAAA---CAAATACAAGGCAAAAA chr4 + 94230402 37830503 37830502 37831499 37830503 37830502 37831499 997 AAATTCATCTTCTGA-----TGCTACATGACTGCAGATAGTAAAGCACTAGATCGCAAAGATAGATAAGACCATGCCATACTCCTGCATGAGGTTATGATTCCCTAGCTGCACTCATTTCATTATAGCCTGGGGAAAGAGAAAGTGGTGTGACAGAGCATGGCATCGTTCTAAACAACTGCATCAGTAGAAACCCCCTGCAGAATTTTAAGTCATTCA-TCATCTTCACACCCTCATTCCTCCTCACT--GTGCTGA-TAAAATGCTTTGCATCCATTATTAAAACACATCTTT--CTGTATTAGAATAGCCCTGCAGCCAGAGCTGTTCTCT--GCTTCGTTATGTGAGACGAGAAACTATACAAACTTCTAATTTAACATGTTTTCTGACAGTCTAGCATTGACAAACTGCTTTTGGCAACTCACTTTCTTTTCTGCATTATTCTCATACACCAAATATCTGCAAGTTAAAATGAGGTGACATATTTGTTTGTGGCTTGCATAAAATTAAACAG---------AAAGACTTG------------GTGTGAAATTTATTATAAGGAAACACAGAGGCTGAAATAA----TGG------TACTCATCAAAGCAAA----CCACTAACCCAGTGTGAGGTGTAGATTTGGTAAAAATGTTGCCTGTGCTCTGACATGTTGTATCTTGTGGACTGCCTCATCCTAGATGTCTCACCTTGGGTAAGATTGG--GTGCTATTTAAAGTGAGTACAGTGTACAGGCTTTATTTAGTTTTTGCCT---------GAATCTAAACACAGTAGACTGTAATGTGTGACCATCTGTCTA------AAAGAGGAAGGAAAAT-------GTTATTAGAGGTGTCGTATGTATTTTTAAGATTTATTGGAGTCCTCTGATGGTGCAAAGTGACATATTAAATTAGTATATAAAAAAGTAAATTGGATGGGAAAAAGTGTGAAAGAGGCACTCCAGGACTAACCCAGTATTTTCTCATAGAAAAGACTGTTCTACACAGC-TGCTTTTCTTGTGTTCAGAAATGGCAAAGACGACTCAGAGA ...x.:......::.-----....:....:--:..:.:x:..:.......:...x::x........x:.x.........:..x:.............:x..::....:.:..:...:.x...:.........:...x:.:..x:::.::.....:x::...x...xx:.......x.-......xx..::.::.:-------:..x..x..:.x....-....:.x.x:x..:.xx.xx.:::...:.--:::....-......:...::x..xxx.x....xx:.....:...--...xx...xx.:...:.x...::x...x.:x..x.:x--.....:.:..:.x.:---------.:.:x..:..x:....x.:.x..:x.x.:xx.x.x...xx::..xx::.x........xx:.::..-..x....:.:.---------------...x:.x...:::x.x......:::xx.------------------..x.x:...:x...:...---------.:..x....------------:.:....--...x.x....x..:x::xx..:x.:......----...------.:....x.x.:.:x.:----....-.x.::xx...:.x:.-..---.::.:.:..:.--------:::..xx....:xx.:.--------..x:.....xxx.x:.x:xx.:..:....:...:...x:--x.::.:.x...xx..:...-----.x.xxx..:.:.:.xx::...xx.:---------.:.::.x..x.x....:::.......:xx::x:x.....x.x------......x:.:..:...-------.xx............::x::.:.:xxx..:xx....x:...x:.....:x..::::x.x::.............x..:..::....:.......:.x::.....:x:x....:x.:-----:x.:::..:..----..:x..:...x..x..xx...:..:..x:x..x-.::x....:.x.:.:..x...---....x..:.xx..:.:. 15M5D10M2I145M1I17M7I16M1D29M2D7M1D36M2D37M2D15M9I66M1I11M15I28M18I18M9D9M12D7M2I31M4D3M6D16M4D4M1I15M1I2M3I11M8I17M8I39M2D19M5I25M9D42M6D16M7D116M5I11M4I33M1D21M3I17M 552/904 61.1% 997/94230402 0.0% 166/904 18.4% 55094037 NA +3521 chr4 + 190214555 92954177 92954176 92954232 56 AAAAAGCATACTATGTGTGTGTGTGTATATATGTATACACACAAACATATACACAC chr4 + 94230402 24295779 24295778 24295834 24295779 24295778 24295834 56 AGAAAGCTTACAGTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACAc .:.....x...x:........................:.xx:...:::........ 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 68658398 NA +3231 chr4 + 190214555 92965442 92965441 92965496 55 TCAATTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACACAA chr4 + 94230402 73664711 73664710 73664765 73664711 73664710 73664765 55 TCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAACCCACAA ....x..:.....:...x..x:.x..x..x...................x..... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 19300731 NA +4133 chr4 + 190214555 92978882 92978881 92978974 93 ACATGGTGGTGCATACCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCTCAGGAGTTTGAGGCTGAAGACCTATGAT chr4 + 94230402 76033196 76033195 76033285 76033196 76033195 76033285 90 ACACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC-ATGAT ...::........--.x.:....:...........::........x:xx.x.:.x.......:.:...:..:..x:.....x...x.-..... 13M2D72M1D5M 68/90 75.6% 90/94230402 0.0% 3/90 3.3% 16945686 NA +10127 chr4 + 190214555 92979609 92979608 92979969 361 ATCCAACCTCATTTCCGATGTAATTCAGACTAAAATCTAAAAAC-TGCAAATCCTACAGTGATGCACAGAAAGGTTAATATCAAGTGTGAAC-CCAGCTTACAAGCCATAGTTCTGCATTTTCAACTACAAGGGTTCATGTGCCATACTTTGGAATTAGTGCAAGCAAAAGC-------------CAGCTC---ACATTGCTTGTGCATTTTGTTACCTAGAGAGATTTGCATTTAGCAAATTTAGCTCAGCTGGCACTTATAAAAAAGCCATTGCCAGAATGCCTGAGAAATTTAGTCTCTTG--TATGGTACTTAGAGTGGTCAGCAGG-AATGTTAGC-AGACAACATCTCATTTTTGCAATTAATCTGCTTTATCACTA chr4 + 94230402 37850987 37850986 37851353 37850987 37850986 37851353 367 ACTCAACCTCATTTCCTCTGTAATTCAGAATGAAATCTGAAAACGTCCAAATCCTCTGATGATGCACAGAAAGGTTATTATCAACCATGAAAGTCTTTGTGCAGGCACTGGTTCTGCATTTTAAACTATCAGGTACTATTTGCTGTGTTTTGA-------GTGAGCACAAGCCCTGTTTGCTGATCAGTTTTCAGCATATTCAGTAAATTTCAGTATTTTCAGAGATTTGCATAGAGCACTTCTAGTTCAATCAGGTCTCAT--GAAAGTAATTCCAGGAAAGTCTAAAAA------TCTCTGAACAATGGTACTTAGCGTGGTCAGCAGGAAATGCCAGTGAGAATTCATC-CGTCTTTCTGGTTCAACTGCTTTGTCATTA .::.............xx...........x.:......:.....-.x........x:::..................x......x::....x-:.xx:x.:..:..xx.:............x.....:x...xx::..x...::.::....:-------.::....x....-------------...:.:---:...xx::x..:x....::x..::.xx............xx....xx.:...:...::::.xx..:..--:....:x...x.x:...x.:..:.:..------.....x:--x...........x............-....::..:-...xxx....-.:.:...x:::..x.x.......:...:.. 44M1I47M1I60M7D12M13I6M3I68M2D27M6D7M2I25M1I9M1I10M1D30M 242/345 70.1% 367/94230402 0.0% 38/345 11.0% 55128622 NA +3662 chr4 + 190214555 92989315 92989314 92989382 68 TCCCATAGCTATTTTATATGTGTGTGCATGTTTATGTGTGTGTATATATGTATATGTACACATATGTA chr4 + 94230402 65759972 65759971 65760037 65759972 65759971 65760037 66 TTTCATATCTACTTTAGATTTGTGAGTATG--TATGTGTGTGCATACATGTCTGTGTATACATATGTA .::....x...:....x..x....x.:...--..........:...:....x.:....:......... 30M2D36M 53/66 80.3% 66/94230402 0.0% 2/66 3.0% 27229343 NA +3055 chr4 + 190214555 92990180 92990179 92990227 48 CATTCATCTTAACATTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 8984603 8984602 8984650 8984603 8984602 8984650 48 CATTTATTTTATTATTCTCTGTGTGTGTGCGTGTGTGTGGTTTTGTGT ....:..:...x:...:............:.........xx.x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 84005577 NA +11868 chr4 + 190214555 92992736 92992735 92993223 488 CTCTCCTCTATATTTACCAGTAGATAATAATGAAATGTCACAGACTTGAACATTATTAAACTTATATTTGAGATGCCTTTCAGAATTTTTCACGTTTCCTGCTGCTGTCTGCCTTTTCTCCTC---TTTGTTGTGTCTCATAAATTTTTATGACCTCTTTGCGTTGGAAATCTGT---AATTTTTCCCAGAGCTCTGCTAGGTACCTTCTAGCAGTAATAAAACTCTTGTCACTTTCCATTGCAGC-TACTTTCAGAGTGAGGCTTACTGGCTTCACTCTGCAGCATATTAGATAAAATAATCAATATGCTCAGGTTGAAAAATTAAATGCAGCATTTGTGTATCCATCGAATTACAGTGCTTTGAGCTTGGAACAGATGGCCTTGCGAGACATTTGCTAGCTTACTTGAGAGTGGCTATTTTTTTTTCTTCTTTTTGTTTGTACTTGATTTTGCATTTACAATAATAATAATAAAAGAATTGCCCAAGATGATT chr4 + 94230402 37861176 37861175 37861642 37861176 37861175 37861642 467 CTCTCCTAGACAACTAGAAAGAGATCATTATGAAATGTCACTGGCTTAGGCATCACTACACTTACCTTTGAGATCCCTTTCAGTATTTATCA-ATTTATGACAATTGT-GGCCTTTTTTTTTCTGATTTGTCAGGCCTCCTTCATTTGTATTCCTTTTTCTCACTGGAAATCTGTGTAATTTTTTCCCAAAACAGAGCTGCATGTCTTCTAGCTCTAATAAAA--TTTGTTTCTTTTCCTTCCAGCTTGCTTCCAGAGCAGGGCCTTCTGGCAT-ACTCTGCAGCACAGGGGATAAAATAATCTCTAAGCCTGGATCTGAAAATGAAATACAATGTTAGTTTTGTTACCAAACTCTA-----TACAGCCTAAAACAGATGGGTTTTTGATGAGGCTTTTAGTGTGTTCATAAGGA----------------TTTTTGAGTTGTATATGATTTTTATTTTGAA--AATATGAATTGAATGACTACTCACAATGACT .......xx.:.x:..xx.:x....x..x............x.:...:::...:.:..x.....:x........x........x....x...-:...x:x:.x::...-x.......:.::..---.....::x.:...x.xx....x...xx.:.:..:x.::...........---.x.........:.:.xxx...:x:.::........xx........--:....:x....:.x..x....-.:...:.....:::...:.x.....x.-...........:.xx:............xx..x..:::.:.:x:.....x....:..:::..x..x.xx::.:.:..:.x:.-----.xx...:.::.........x:..x:..x:x:x:.x:...:x.::.::x:..x:----------------:....x:x.....:x.......xxx...:x.--....xx...x:..x:.:.:.:..x:....:. 92M1D15M1D14M3I49M3I45M2D21M1I27M1D82M5D53M16D31M2D31M 301/460 65.4% 467/94230402 0.0% 35/460 7.6% 55131560 NA +3001 chr4 + 190214555 93021017 93021016 93021071 55 AGCGAGAATTTGTCTCAAAAAAAAAAAAAGAGAAAGAAAAATATTTTAAAAATCA chr4 + 94230402 21774127 21774126 21774181 21774127 21774126 21774181 55 AGCAAATATTTGTATCAAAAAAAAAAAAAAAGGAGAAAAGACATAGTGAGAATCA ...:.:x......x...............:..:.::...:.:..xx.:.:..... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 71246890 NA +10617 chr4 + 190214555 93029883 93029882 93030100 218 AAACATGCTTTATTCATGTGCCAGGCTGCTCTTTCTTAGC-ATGCAAATAAAACTGCATGAGGGCTAACAGCTGCTCTTA----GAGTACTGCATGTCCCAGTCTGCTAGGGGAACACAGCTGGAGAAATGTACAGAGCATTTTCATCATTGAATCAAACACAAACTAGAAAGCCATTTAGTACTACATATGTAATACTATTACTATTGAAAAGTAGAGTTTC chr4 + 94230402 37892263 37892262 37892483 37892263 37892262 37892483 221 AGACATGTTTTATTCATATAGCAAGCTGCTATTTTATACTGATGCAAATAAGGCAACATGTGAACTAACAGCTGCTCTCAAACAGATTGCTGCATGTCACAATCTGCTAAGGGAGCACAGCTGGAGAGATCTGCAGAACATATTTAACCATAAATCAAACACAAACTAGGAACGCATTAAGTACTGTACATATAATAGCATTGATGTTTACGA--AGGGTTTC .:.....:.........:.:x..:......x...:x..x:-..........::.x:....x.::..............:.----..x.:.........x..:.......:....:............:..x.:....:...x..:.x.xx.:.................:..xx....x......::.:..:.....x:...:x.:..x.x:.--..:..... 40M1I39M4I129M2D8M 164/216 75.9% 221/94230402 0.0% 7/216 3.2% 55137620 NA +3047 chr4 + 190214555 93033649 93033648 93033724 76 TCTTCCCCTTCCTCTCTATCTCCATTCCTCTCCTCTCTCTCCTTGTTTCTGTTTCAACTTTTTTTCATTTTATGAA chr4 + 94230402 6792848 6792847 6792923 6792848 6792847 6792923 76 TCCTCCCTTCCTCCTCTATCCCCCTTTCACTCCCCTTTCTCTTCAGTTTTCTGTCGTCTTCTCATCTTTATCTGAA ..:....:.:.::.......:..x..:.x....:..:....:.::x..:.x.x..:x...:.:x..x..x.x.... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 86240801 NA +3218 chr4 + 190214555 93038651 93038650 93038720 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:.........:.::........x.xx.x...xx:.x.........:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 17005454 NA +4121 chr4 + 190214555 93042237 93042236 93042427 191 TATATTTTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA-TATACACCTATTTAACA-----------------AACCTGCACAT---------TCTGCACATGTACCTTAGAACTTAAAGTATAATTTTATATATATGTGT--------ATAT---ATACATACATACATATATACATGTATATATAT chr4 + 94230402 4618329 4618328 4618551 4618329 4618328 4618551 223 TATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTA----TTCTATtata--tatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtat ......x.::x.x.:.:...:...:x:x.::.x.....:.::..............x:..x.x:......x.x......-....x.:x....xx.:.-----------------..:x:.x.x..---------.:.::x:...:x:.x..----..xx.x....--.x.............--------....---.......:...........:..:.:...:... 79M1I17M17I11M9I17M4D10M2D15M8I4M3I32M 131/185 70.8% 223/94230402 0.0% 44/185 23.8% 88423908 NA +3652 chr4 + 190214555 93042248 93042247 93042426 179 TCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTC--------TCTCTCTATATA------------TATATAT-----------------------ATATATACACCTATTTAACAAACCTGCACATTC---TGCACATGTACCTTAGAACTTAAAGTATAATTTTATATATATGTGTATATATACATACATACATATATACATGTATATATA chr4 + 94230402 4618342 4618341 4618554 4618342 4618341 4618554 213 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatat---------atgtgttagattacatataca---atacatatatacatatatatatatgtatgtatata .:.:...:...:x:x.::.x........:..............x:.--------.x..........------------.......-----------------------.x...x.:.xxx.....x.x.xx..x.::....---.::.:..:..:x.---------.x..:.x.xx...:.....::---...:...:.......:.......::.:.:...... 46M8I12M12I7M23I33M3I13M9D21M3D35M 119/167 71.3% 213/94230402 0.0% 58/167 34.7% 88423906 NA +4480 chr4 + 190214555 93042251 93042250 93042427 177 CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA---TACACCTATTTAACAAAC------CTGCAC--ATTCTGCACATGTACCTTAGAACTTA--------AAGTATAATTTTATATATATGTGTATATA------TACATAC---ATACATATATACATGTATATATAT chr4 + 94230402 4618339 4618338 4618543 4618339 4618338 4618543 205 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatat ..x.:.:...:...:x:x.::.x.:.....::..............x:....::......x.x....---..:.xx...x.x.:.x.:------:..:..--..xx.:.:x.x:..xx.x..:.:...--------xx....xx.x..........:.:...:.:------......:---..............:......... 67M3I18M6I6M2I26M8I29M6I7M3I24M 124/177 70.1% 205/94230402 0.0% 28/177 15.8% 88423912 NA +3291 chr4 + 190214555 93042253 93042252 93042438 186 CTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA---CACCTATTTAACAAACCTGCACATTCTGCACATGTACCTTAGAACTTAAAGTATAATTTTATATATA-------------TGTGTATATATACATACA------TACATAT---ATACATGTATATATATTACATATCTGT chr4 + 94230402 4618339 4618338 4618545 4618339 4618338 4618545 207 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT-TATATGTTGTACTAATAATACGGAGAT--AGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacata-tatatatatgt ..x.:.:...:...:x:x.::.x.......::..............x:x...::......x.x....---:.:xx..x..x:.x.:x.-:.:..x:..:..xx:..x:x::..:x.--.::..x::x.....x...:-------------.:.:........:..:::------.......---......:....:...-..:....x... 67M3I18M1D27M2D19M13I18M6I7M3I15M1D11M 119/182 65.4% 207/94230402 0.0% 29/182 15.9% 88423914 NA +3380 chr4 + 190214555 93042255 93042254 93042434 180 CTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACACCTATTTAACAAACCTGCACATTCTGCACATGTACCTTAGAACTTAAAGTATAATTTTATATATATGTGTATATATACATA---------CATACATATATACATGTATATATATTACATAT chr4 + 94230402 4618339 4618338 4618516 4618339 4618338 4618516 178 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCT------CTATATAGTA----TAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgt-tagattacatat ..x.:.:...:...:x:x.:..x.......::..............::x...::......x.------....x..::.----.:x.:..x:.::.:..xxxx:x.x.x...x.x.:..:::xxx..x...x:x:.x...x...:.x.x---------:...:.......:....:.-..x......... 62M6D10M4D66M9I19M1D12M 108/169 63.9% 178/94230402 0.0% 20/169 11.8% 88423916 NA +3149 chr4 + 190214555 93042276 93042275 93042354 79 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACAC-----CTATTTAACAAACCTGCACATTC--TGCACATGT chr4 + 94230402 60831530 60831529 60831615 60831530 60831529 60831615 86 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGT ...x.....x.............x.:.......:.:....:.:....-----..x:.x..:.x.::.::.::x..--...:..... 47M5I23M2I9M 58/79 73.4% 86/94230402 0.0% 7/79 8.9% 32210746 NA +3163 chr4 + 190214555 93042278 93042277 93042322 45 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATACAC chr4 + 94230402 60831530 60831529 60831574 60831530 60831529 60831574 45 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACAC ...x.....x.............:.:.......:.:....:.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 32210748 NA +3067 chr4 + 190214555 93069256 93069255 93069329 74 TATGTGTGTGTGTATAATATATATGTGCGTGTATGTATATATATATGCATGTGTGTATATATATACTTAGAAGA chr4 + 94230402 49607708 49607707 49607781 49607708 49607707 49607781 74 TACATGTGTATGTATTTTATATATGTGCTTTGAGAAACAGAAATGTGTGTGTTTGTATACATATGCCTACAGGA ..::.....:.....xx...........x.xx.x:x.:.x.x..:..::...x......:....:.:..x.:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 43461548 NA +3096 chr4 + 190214555 93076582 93076581 93076631 50 GCAGACCTTCTTCAAAATTCACCAACCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63778682 63778681 63778731 63778682 63778681 63778731 50 GTAAATCTTTTCCAAAATTTCCAGACTTCTTTTTTTTCTTTTTTTTTTTT .:.:.:...:.:.......:x.x:..:..........:............ 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 29297900 NA +23228 chr4 + 190214555 93084965 93084964 93085290 326 CATTTTGAATATTACTGTGCTTTCTTGCAGCCTGTGAACTTATGAATCAAGGCATCTTGGCCCTGGTCAGCTCCATTGGCTGCACGTCAGCAGGATCCCTCCAGTCTTTGGCAGACGCCATGCATATCCCCCACCTCTTCATTCAGCGCTCAACAGCTGGGACCCCAAGGAGTGGCTGTGGACTCACCCGGAGCAACAGGAATGATGACTACACTCTCTCAGTTCGCCCACCTGTCTACTTGCATGATGTTATCCTAAGAGTGGTCACAGAGTATGCCTGGCAGAAATTCATTATATTCTATGATAGTGAATACGGTAAGTGTTTA chr4 + 94230402 37923385 37923384 37923710 37923385 37923384 37923710 326 CATCTTGAACTTTACTGTATTTTCTTGCAGCCTGTGACCTCATGAACCAAGGCATCCTGGCCCTTGTGAGCTCCATTGGCTGCACGTCAGCAGGTTCCCTGCAGTCATTGGCAGATGCCATGCACATCCCTCACCTCTTCATCCAGCGCTCAACAGGAGGAACACCAAGAAGTAGCTGTGGGCTCACCAGAAGCAACCGCAATGATGACTACACGCTCTCGGTCCGCCCCCCTGTCTACTTAAATGATGTCATCTTGAGAGTGATCACAGAATATGCCTGGCAGAAGTTCATCATTTTTTATGATAATGACTATGGTAAGTAGTTA ...:.....:x.......::.................x..:.....:.........:.......x..x..........................x.....x.....x........:........:.....:...........:.............xx..:..x.....:...:.......:......x.:......x.x..............x.....:..:.....x...........:x.......:...:.:......:.......:..............:.....:..x..:.......:...x..:.......:x... 326M 277/326 85.0% 326/94230402 0.0% 0/326 0.0% 55161580 NA +13390 chr4 + 190214555 93099851 93099850 93100135 285 TGTAGTCTTGATGTAGGTTTAATCAAGACCCTTGAAATGGACACATTCCTCTTAATTGATTGCAAATGTTTATGATTACCCAGAGAGTGTTTTCAAATGTCTGATGACTATAATATTACTGACTTTCTCTCTAGACAGTCTTAAAGCTGTTTATTGCTCATTTGGCTACTTTCCAGCTTTCAGTTGTCTCATTTACTTCCATGTGCATCAATA---AGCATATAATTAATCCAAACATCTTATTGAACCATTT--CCTTTGCATTAGTATATATGATGTTAAGTAGGTAA chr4 + 94230402 37929731 37929730 37930018 37929731 37929730 37930018 288 TGAAGTTTTAATGCAGGTTTAATAAAGATTCATAAAAGAATCACACTCTCTGTAATAGATTGCAAATGCTCATAATCACCCTGAGGCTGTTTTCAGCTGCCTGATGACTATAATATTTATAAGTCCAGCTCCAGACAGTCTTAAGTCTGTTTATTACTCATCTGATTCTTTGCCAACTTTCTGT--ACTCATTTACATCACCGTGCCTCAATAAACAACATATAATTAATTCAGGCTTCTTATTGAACTATTTTGTTTTTACATTAGTATGTATTACATCATCCAGACAA ..x...:..:...:.........x....::.x.:...x::x....:..:::x....x...........:.:..:..:....x...:x........:x..:.................xx.:.x.::xx...:............:x.........:.....:..::.x:..x...:.....x..--x.........x..xx:....x......---.:............:..::.x...........:....--::...:.........:...x.::.:.xx:..::.. 184M2D27M3I37M2I35M 209/283 73.9% 288/94230402 0.0% 7/283 2.5% 55170120 NA +15718 chr4 + 190214555 93110667 93110666 93110960 294 TTCTGATATAGGTGAAATAGCTT-----ATGCCTTCCTT-----CTGTACAATAATTCACAGGTATTTTGATGGGCTTTTGATGTTTCCAGATATCCGTGGAATACAGGAGTTCTTGGACAAAGTCTCTCAGCAGGGAATGGATGTTGCACTTCAGAAGGTAGAAAACAACATCAATAAAATGATTACCACTCTCTTTGACACCATGAGAATAGAAGAACTGAATCGCTATCGAGACACTCTTAGGCGAGCGATCCTTGTTATGAATCCTGCTACAGCCAAATCCTTCATTACTGAGGTAAGTG chr4 + 94230402 37939482 37939481 37939781 37939482 37939481 37939781 300 TTATGACACAAATTGAACGGCTTTTTTTGTGTCTTCCTTTTTCCCTACTTACCAATTAACA----TCTTCCTTGGCTTTTGATTTTCCTAGATATCCGTGGAATACAAGAGTTTTTGGACAAAGTATCTCAGCAGGGAATGGATGTGGCATTGCAGAAAGTAGAAAACAATATTAATAAAATGATCACGGGGCTCTTTGCCACCATGCGAATTGAAGAACTGAACCGCTACCGGGACACTCTGAGACGGGCTATTCTTGTGATGAACCCCTTGACAGCCAAATCATTCTTAACAGAGGTATGTG ..x...:.:.::.x:..::....-----:..:.......-----..::x:.x:....x...----.:..xx.x..........x..:.:..................:.....:...........x....................x...:.x.....:...........:..:...........:..x:xx.......x.......x....x...........:.....:..:........x..:..:..x..:.....x.....:..:x:x...........x...x.x..x......x... 23M5I11M5I17M4D239M 229/290 79.0% 300/94230402 0.0% 14/290 4.8% 55171185 NA +3582 chr4 + 190214555 93131572 93131571 93131661 90 TTGAAATTTTTAAAAATTAAAAATTAAAAATTTTATTTAAATTTTTTTATTTTTATTTTTAATTTTTATAGATGCATACTAGTTGCATAT chr4 + 94230402 39874742 39874741 39874823 39874742 39874741 39874823 82 TCAAAATTTTAAAAAACTAAAAGTTAAAAATTGACTTTCAGTTTTTTGTTTTTTTTTTTTA--------AGATGTAGATCAGATGAATAT .::.......x.....:.....:.........xxx...x.:......xx.....x......--------.....:.x.::..x..x.... 61M8D21M 63/82 76.8% 82/94230402 0.0% 8/82 9.8% 53256830 NA +3251 chr4 + 190214555 93145411 93145410 93145483 73 TTGTTTTCATTTTAATTATTTTTTATTTATTTATTTGTATTTGTATTTATTTATTTATTTATTTT--------TTTTTGAG chr4 + 94230402 84043405 84043404 84043485 84043405 84043404 84043485 81 TTGTTTTCATTTCATTAATTTATTTTTTCTTTGTGTGTGTGTGCTTTGATATATTTATTAATTTTGACTGTTGTTTTTGAG ............:.x.x....x..x...x...:.x...:.x..:x..x..x........x.....--------........ 65M8I8M 58/73 79.5% 81/94230402 0.0% 8/73 11.0% 9102006 NA +3072 chr4 + 190214555 93145626 93145625 93145686 61 TTTTGTATTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGAGATGG chr4 + 94230402 34825713 34825712 34825773 34825713 34825712 34825773 61 TTTCATATTTCTTACTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGGG ...::........x:.x.x....x.x.:.....:................:.x:.:.:x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 58319913 NA +7498 chr4 + 190214555 93146331 93146330 93146536 206 GAAAATAAAGTTAAGAGGGCAATTCAATTTTGATAAA-----AATTGAGTCAATGATGAAAGC-GCATCCTGTAAGCTCTAATGTAAACCCAGTCTTTGAAAAATATCATGCAT--GGTACTTGGAAATTCTTTGAGGAATGAAAGCTTTTCATGTGTGATCTTCTTAAAATGGAATTTACGTTCAAATTCAATGGACCCATGTGCACAAAGAG chr4 + 94230402 37949429 37949428 37949642 37949429 37949428 37949642 214 GAAATGGGAATTGAATGAACAATACAATTTTTTTCCATTTTCAGTCAAACCAATGATGAAAGCAGCTTCCCACAAGCTGTACTTTAAGCAGAGTCTTTTAAAAAAATCATGTATTTGGCATTTTGGAATACTCTGAGGACTGAAAGCTTTTCCTGAGTGATTTCCTTAAAGTAGAGATCATGTTTGAATTGCTTTTATATTTGTGAACAAAGAG ....xx::.:..:.:x.::....x.......xx.xx.-----.:.::.::.............-..x...:::.....x..x.x...:.xx.......x.....x......:..--..:.:..x.:...x..:......x............x..x.....:.:......:.:..:x.:.:...::....xxx.xx.:x:x....x........ 37M5I21M1I50M2I98M 144/206 69.9% 214/94230402 0.0% 8/206 3.9% 55196902 NA +3401 chr4 + 190214555 93146603 93146602 93146736 134 GGAGGAGAGAGAGAGAGAGAAAG-AGAGAAAGAAAGAAGGAAAGAAGAGGGAAGGGAGAGGTTGTTAAAGGAAAGAGCCACTACAGGTACCTAAGTGATTTAAAAAAAAA---AAAATCT-TATACTTATAAATATTGT chr4 + 94230402 24562551 24562550 24562688 24562551 24562550 24562688 138 GGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGA-ACATGAATTATGATATGAGACTGAAAAGCCAAAACAGAAACAAAACAGATCAAAAGAAAAAACTAAAGTCTATGAAATTATGAATAGCGT ..x...................x-...:...:..:..x.:....:...-:x.x.::xx.x.x.:.x.:.xx:..:.....xx....:x..xx..xx...:x...:.....---...:...-.:x.x....:....x:.. 23M1I24M1D61M3I7M1I18M 91/133 68.4% 138/94230402 0.0% 6/133 4.5% 68584052 NA +3190 chr4 + 190214555 93154741 93154740 93154803 63 AAAACAAAAACAAAAACAAACAAACAAAAAAAACACCACCACCACCACCACCACCAACAAAAA chr4 + 94230402 42574999 42574998 42575061 42574999 42574998 42575061 63 AGACTAATGACATGAAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAA .:.x:..x:...x:..x.x:....xx.......x...................x......x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 50579742 NA +3311 chr4 + 190214555 93154745 93154744 93154806 62 CAAAAACAAAAACAAACAAACAAAAAAAACACCACCACCACCACCACCACCAACAAAAAACC chr4 + 94230402 45244340 45244339 45244401 45244340 45244339 45244401 62 CAAAGGAAAAGATAAATAAAACAAAACAAAACCACCACCACCACCAAAAGCAACAACAAACC ....::x...:.:...:...xx....x..x................xx.x......x..... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 47910405 NA +3018 chr4 + 190214555 93168230 93168229 93168294 65 GGAAAGGAAAGAAAAGGAAAGGAAAGGGGAAGAAAGAAAGAGAAAGGAAAGGAAAGGGGAAGAAA chr4 + 94230402 62301306 62301305 62301370 62301306 62301305 62301370 65 GGAAATTAAAAGGAAAGTGGGGAAAAGGCAGGAGAGACTGAGAATGGAAGGGAAAGAGAAGGAAA .....xx...:::..:.x::.....:..x.:..:...xx.....x....:......:.:.:.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 30866924 NA +3193 chr4 + 190214555 93169138 93169137 93169204 67 TGAAATACACACACACACACACACACACACACACACACACACACACAAACTTAAAATAGGCTAAGTG chr4 + 94230402 46140852 46140851 46140918 46140852 46140851 46140918 67 TGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAAGGTG ..x....:.:.:........x.x....:........::::.:.:...:.....x.:x..x.x.:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 47028286 NA +3485 chr4 + 190214555 93172459 93172458 93172534 76 GCACGTGCCTTTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCACAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......----..:.:...........:.........x.xx.x...x..........::.:..x:x::..:..:.. 7M4D65M 54/72 75.0% 72/94230402 0.0% 4/72 5.6% 17139253 NA +10972 chr4 + 190214555 93201636 93201635 93201995 360 TGATAAACAGCATGTTGCTGTTATTGTTTAGTCAATTAAATCGTCC---CCTGCACTTGTAGGAACTGTTCCACATTTATTACTAGTGAGAA----------ACAAGCTCG------GGCAGGGTTGTTGATTTCCTTGCATTGGGTTGTGTTATATTTAGCACATCTAAAGATTTGAGAATGAATGATGGAAGACACAGTGATAAATTGTCGAGCTTTTCCAAAGATTCAGAAGTTCTAAAGTTCCTGCCAG-TGACAGATGGTCTGTCCTTACTCATTGCTTGTCTTCCTGACAGGACTTGATTTTTTTTTTTCCTTTTTTGCTCAAT-TCCCTTATAGTAAGCTCAGCTTCTTGGGAGGTGGGATAGTTTAATTTGTT chr4 + 94230402 37985671 37985670 37986035 37985671 37985670 37986035 365 TGTTAAAATGGATGTTCCTTTT---GTTTGG-CAGCTATATTTTTCTTGCTTGTTATTGTAGGAAATATT--ATTCTGAGTAGTAATGAGGATTATCATGAGAAAAGCTTGCATGCTGGCAATGCTGCTGCTTTATTTACTTTGGAATGTCTTGCATTTAGCCCATTTGAAGGTTTGAGTATGAACAATAGAAATAGTTGTGATAAATTGTCGGCCTCTTCCAAAGATGCAGAAGTTCTGAAGTTACTGCCAATTGACAGATGGTTTGTCCTTTCTCATTGCTTATCTTCTTGACAGCA----------TTTTTCTGCTCTATGCAAAATCTTCCTTGGTGTGTAGTTGAATTCTTTAGAGGAAGAAAATTATATTCTGCT ..x....xx.x.....x..x..---....:.-..::..x..:x.:.---.:..:xx.........x.:..--.:x:.x.x..x..:....:.----------.x.....:.------....:x.:..:..x...x:..:.x....:x...x..::.......x...:.:...:......x.....::..:...:xx::x..............:x..:..........x..........:.....x......:-...........:.......x..........:.....:......x.----------.....::x:.:.x...xx...-.:....:xx..:x:x.:::x.....x:....x:.:.x.x.x..x.:..:. 22M3D6M1D14M3I21M2D20M10I9M6I136M1I45M10D21M1I50M 244/344 70.9% 365/94230402 0.0% 37/344 10.8% 55215965 NA +16294 chr4 + 190214555 93207177 93207176 93207817 641 TGAATTATGTTTTCAAA-TATAATTAGCAAGTCTA-CAGTGCATCTATATGTATGTCAAATGCAAATGCATCTACAGTGTTTTGCTAATAATTTTTCCATCTTCAATTGAGTAACAAAGACCTTTCTAA----CATACGATTC-ATTTTTTGTCATTTGCA-------AAGTATATTCATTTA--GTTGGGTT-TGTTTTGCATGATTAATTTTGACTGATAGCTGATTTGTTTTCTATTCTAGGTTGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGTAAA-GCCAACTAAACCTTATTGTTAACTCTGTGTCCTTTTTTCACATATATAATTGTAGCATTTCCAATGGCCTTGAATTTTTAAGC-GGAAACAAAACTTGAAGTAAACATTCAACTTACTGAGTGAATG-CTGTTTAACAAAGATAGAATGAAGAGTTTTT---------------------------------AAAAATGATAAAGGGTTTTAT-ATTAATAAAATAAATGGAGAAAGTCTTTCTCACTGAGTCTCTTTTAGCTCTTTCTGTTGGCTCATTCTGCCTGCTCAAGGAGATCATCTTTATAAAAAGTACAGTTCTACTTTGTAAGCAAAGTAAACTCCTCCCAGTGGAGTGCTTGTGTTCCATTTATATTTTAATGTTGTTTCT chr4 + 94230402 37991762 37991761 37992397 37991762 37991761 37992397 636 TGAAATATATTTTCCAACTTTAATTAGCAAGTCAAACAAT------------------AACACAAATGCTTCCACAAAATTTTGCTAA-AGGTTCTCTATCTTCAGTTGAATAACAAAGG---TTTTAAAGAGCATGTGCTTCCGTTTTTTGTCATTTGCAGATATTTAAGTTTTTTTTTTTGTTGTTGCTTTCTGGTTTTCATAAGTAAGCT-GACTGATAGCTCGTTTGTTCTCTATTTCAGGTCGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGTAACTGTCAAGTGAACATTGTTGTGAACCATGAATCTTGTTTTCAGGCTTACAGACA-AATATTCACGCTGGTCTTGCCTTTGCCAGCAGGAAGCAATAGCTACAACAAAGTTCAGGCATGCTGAGAGGGTGAACATTTAACAGAAAGAGAATGCCAAGTCTTTTGGTTTTGCCATTTTGTCTTGCCTATTTTAAACAGAACTACTAAATGAGTAAATGAAAAATAAAGTTAACAAAAAAA--CTTTCCTACTGAGT---------------------ACTTGAGCTGACTATTCTAGAGGATCTCCTT------AAGACCATTTGTCATTCATAA------TGGATGTCTCCTACTGGAGTGCTTTTGTTTCATTCATATTTTAATTACTTTTCT ....x...:.....x..-.x.............x.-..:.------------------..::.......x..:...:x:.........-.:x..:..:.......:....:........:---..:...----...::.x...-:................-------....x.x..:x...:--....xx..-..x...x...:.x...x:.-...........x:......:......::....:.......................................................x-.:...x.:...x..:....x...:x..x:..:.x......x::x..:.:x::-.::...:x.:x...:....xx...x:x...-....:...x.x:.:x.::...xx.:x::.x.:.....x.::..-x::.......:.:.x......xx:...:...---------------------------------.:..x.:x....x.:x.xx..-.xx......:.x..:::.:...--.....::.......---------------------:..::xx...x..::..x..::....x:...------...xx..x..x.xx..::...------.::.:x:....:.x..........x....:....:..........xx:x..... 17M1I17M1I4M18D30M1D31M3D6M4I10M1I17M7I15M2I8M1I19M1D89M1I52M1D30M1I43M1I31M33I21M1I22M2D14M21D31M6D21M6D54M 421/582 72.3% 636/94230402 0.0% 113/582 19.4% 55215415 NA +3254 chr4 + 190214555 93216251 93216250 93216360 110 GCTAATTATGTGTGTGTGTGCATGTGTGTGTGTGTATGTGTGCGTATGTATGCATGCG----TATGTGCGTGTGTATAACTCTTACATGGCAA------TTACCTTCCTAGATACTCAAA chr4 + 94230402 79265512 79265511 79265631 79265512 79265511 79265631 120 GTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAA .::..:x:......................xx.....:.::::::.:..:....::..----:..:.x:....x:.:...x.:.x:..:xx..------..:....::.:::.::x.... 58M4I31M6I21M 69/110 62.7% 120/94230402 0.0% 10/110 9.1% 13950739 NA +3194 chr4 + 190214555 93216256 93216255 93216459 204 TTATGTGTGTGTGTGCATGTGTGTGTGTGTATGTGTGCGTATGTATGCATGCGTATGTGCGTGTGTATAACTCTTACATGGCAATTACCTTC-CTAGAT------ACTCAAAGTAATAGTATTAATTAATAATAAACTATAATAGCAACTTACTTTGTGACCTTTTTAAATGTT------TTGACCACACCTATGTTTC-TAC--AATGTTCAACATTAT chr4 + 94230402 39131749 39131748 39131968 39131749 39131748 39131968 220 TTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTATGTGCACACCTTCTCTCCATCCTCTCGCTCAGAGAGAAAGAGCTAAATTGTCAAAGATGAGAATGTGTATTTTCCAGGCTACTTTGTCAGATGTTCGTGTGTGTGTCTTATAAATATTTCATACCAAATATTTAACATTAT ..:.::.::x.....:x...x.x........x......:.:...x.:x....:.x.:.x.:.:.:..:...x..:..xxx.::xx:......-..xx..------:....:..x:.x..x::...x.x:.x.x.:.:x.x...:xxx.:..x.:xx.:x..:..x.:.:.....------.xx::.x:.:xx..:....-...--...:..:........ 92M1I6M6I69M6I19M1I3M2I15M 124/204 60.8% 220/94230402 0.0% 16/204 7.8% 54084507 NA +14336 chr4 + 190214555 93216534 93216533 93216968 435 ATAATTTAAAGCATAGAAAGCAACTACA--AATGAGTTGATAATTTTAACAAAAATATGTTGCTTTCATTTAGATATGCACTAAGCATTAAAACCAAT-ATATTACAGTAACAGAATCCCTAACATTTACAGATAAC----AACTCATAATAGGTTTGTGTTTTGTGACTGTATTAAAGTATCTCTA---ATTCTTCCACCT--CTTATCTTATAGGAAATAAACGATGTGGACGTACAGGAACTTGTAAGAAGGTCAATTGGAAGGTTAACGATTATTCGGCAGACATTTCCAGTTCCCCAGAACATAAGTCAGCGGTGTTTCCGTGGCAACCATCGAATATCTTCAACATTGTGTGATCCAAAGGATCCATTTGCTCAGAATATGGAGGTATATTATAAATGACAGGATATTTCTTCCAGGG---TGCTTTGTTGGGCAATTGCAAGG chr4 + 94230402 37999734 37999733 38000173 37999734 37999733 38000173 440 ATTGTTGAAAGAGTGGTAGTCAATTGTTTTAATGAGCT--TAATATGATCTTTAATATGTT--CTTCATGAGGCTATG-GCTGAGC-TCAACGCTAGCCATGTAACAGTCACACATCTCTTGGTGCTCTCAGTTTATTTATCATTTATGATGTGCTAGTAAAATGT--CTGTATTTTAATTTTTATACGTATTGTTTTCCTTGCCTTATCTTCCAGGAAATAAGTGATTTGGATGTGCAAGAACTGGTGAGAAGGTCAATTGGAAGGTTAACAATTATTCGACAGACATTTCCTGTCCCCCAAAACATAAGTCAGCGCTGTTTCCGTGGCAACCACAGAATATCTTCATCACTGTGTGATCCAAAGGACCCTTTCTCCCAAAGCATGGAGGTAGTTTATATACTGCTG--TATTCCCACCTGGGAACTGTCTTTGTAGATAAGTTCAAGG ..x:..x....x:.:.x.:x...:.::x--......:.--....x.x.x.xxx........--:.....xx:.x....-:..:...-.:..x:.:.::-..:.x.....x...x.x::.:.:::::.:x...x.x.:----x.:.:..:..:x.:.x..:xxx...--.......xx.:.x.:.x..---...x..::x.:.--........x:.........::...x....:..:..:.....x..:.......................:........:...........x..:.....:..............x.................:x...........x..:................:..x..:x.:..:.::.........xx.....x.:x:.x.--....:.:x..x...---..::..xx.:.::..x.x..... 28M2I8M2D21M2D15M1D7M1D11M1I38M4I25M2D19M3I12M2I204M2D14M3I23M 303/425 71.3% 440/94230402 0.0% 25/425 5.9% 55216800 NA +13327 chr4 + 190214555 93224582 93224581 93224785 204 ATTCTAATGATCACTTTCTAATGTCTTTTCAGATTTCCAACCTTTACATATATGACACGGTGCTTCTGCTTGCTAATGCTTTTCATAAGAAGCTGGAGGACCGAAAGTGGCACAGCATGGCAAGTCTGTCATGTATCAGAAAGAACTCAAAGCCCTGGCAGGGTGGGCGCTCCATGTTGGAGACCATCAAGAAGGTAACTTCTT chr4 + 94230402 38005658 38005657 38005861 38005658 38005657 38005861 204 ATGCTGTTACTCCATTTTTTATGTCTTTACAGATTTCCAATCTGTACATATACGATACTGTCCTTCTGCTGGCAAATGCCTTTCATAAGAAGCTAGAGGACAGGAAGTGGCACAGCATGGCCAGCCTGACCTGCATCAGGAAGAACTCAAAGCCCTGGCAAGGAGGACGATCCATGTTGGAAACCATCAAGAAGGTACCTTTTT ..x..:x.:x..xx...:.x........x...........:..x........:..:..x..x........x..x.....:..............:......x.:.................x..:...x.x..:.....:....................:..x..:..x...........:...............x...:.. 204M 169/204 82.8% 204/94230402 0.0% 0/204 0.0% 55218924 NA +8950 chr4 + 190214555 93238317 93238316 93238507 191 TTATTTATTTTTTTACTTCTCAAATTTTACATCAGTATCTGTTCTCTCCTTTAGGGTGGAGTTAGTGGGTTGACTGGAGAGCTAGAATTTGGAGAAAATGGAGGCAATCCCAATGTCCACTTTGAAATCCTTGGAACCAACTATGGAGAAGAGCTTGGCAGAGGTGTTCGAAAAGTAAGACAAGACACACT chr4 + 94230402 38013293 38013292 38013455 38013293 38013292 38013455 163 TTGTTTGTTTATTTGTTTCCCAA----------------------------TAGGGTGGAGTGAATGGCTTGACTGGAGAACTAGAATTTGCAGAAAATGGGGGGAATCCCAATGTTCACTTTGAAATTTTGGGGACAAATTATGGAGAAGATCTTGGCAGAGGCATCCGCAAGGTGAGGCTACaaatatt ..:...:...x...::...:...----------------------------...........x.:...x...........:..........x.........:..x...........:...........::.x..:..x..:...........x...........::.:..x..:..:..:.x.x.x.:.:. 23M28D140M 130/163 79.8% 163/94230402 0.0% 28/163 17.2% 55225024 NA +3036 chr4 + 190214555 93257981 93257980 93258020 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 88848899 NA +3240 chr4 + 190214555 93257984 93257983 93258039 56 ATATATATATATATATACACACACACACACACACACACACACACAATACTGGTAAT chr4 + 94230402 87228037 87228036 87228092 87228037 87228036 87228092 56 ATATGCATGCTTGTACACACAAAAACACACACACAGCCACACACACTACTGGTAAT ....::..::x.:..:.....x.x...........xx........x.......... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 6029947 NA +3125 chr4 + 190214555 93309538 93309537 93309593 56 AAAAAATAATAATAATAATAATAATAAATAAAAAAGAAGAAGAATTAATGAATGAA chr4 + 94230402 26838737 26838736 26838792 26838737 26838736 26838792 56 AAAAAATAATAATAATAATGATGTTGAATAGAAATTAAGGATAATAAGTGAATTAA ...................:..:x.:....:...xx...:.x...x.:.....x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 66470801 NA +3768 chr4 + 190214555 93310395 93310394 93310473 79 GTGGCGCACTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....x--......:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 17277194 NA +3683 chr4 + 190214555 93316251 93316250 93316399 149 AAAAAAGAAAGAAAGAGAAAGAAAGAAAAGAACGAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAAGAAAAAGAAAGAAAGAAAG-AATAGAAAAGGAAGGA chr4 + 94230402 65771201 65771200 65771340 65771201 65771200 65771340 140 AGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAA----------ATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA .::...:.....:.:x:.....:.......x..:...----------.xx.:..:..::.....xx.:..x:.:..x::.x.xx..:.:.....:..::.:x...x.....:x.x.:....x..x..x:..:x-.:..:....::..x.. 37M10D86M1I16M 88/139 63.3% 140/94230402 0.0% 11/139 7.9% 27545050 NA +3115 chr4 + 190214555 93316285 93316284 93316415 131 AAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAAGAAAAAGAAAGAAAGAAAGAATAGAAAAGGAAGGAAGGAAGGAGAAGAAAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:..x:...x........x......:..:....:x.xxxx::..x:x..x........:x.:..:x:xx:...xxx..:....xxx.x::x.x::....x.::x...::.x.......::.:..:.... 131M 77/131 58.8% 131/94230402 0.0% 0/131 0.0% 39304692 NA +3522 chr4 + 190214555 93316297 93316296 93316418 122 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAAGAAAAAGAAAGAAAGAAAGAATAG--------AAAAGGAAGGAAGGAAGGAGAAGAAAAGAA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .:.:...:...x........x......:..:....:x.xxxx::..x:x.:x..:.....:x.:...x.xx....xxx:...:..xxx....--------.....x...::.x......:..:....:.. 92M8I30M 80/122 65.6% 130/94230402 0.0% 8/122 6.6% 39304704 NA +3190 chr4 + 190214555 93316365 93316364 93316439 75 GAAAAAGAAAGAAAGAAAGAATAGAAAAGGAAGGAAGGAAGGAGAAGAAAAGAATGAAAGAAGAAAGAAAAAAGC chr4 + 94230402 48220515 48220514 48220589 48220515 48220514 48220589 75 GAAACATGAAGTAGAAAGAAGTAGAAAACGAAAATAGGAAAGGGAAACAAAAAGCGGAAGTAGGAGGAAATAAGC ....x.x:...x.::..::.:.......x...::x.....:.:...:x...:.::.:...x..:.:....x.... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 45095850 NA +3016 chr4 + 190214555 93359836 93359835 93359910 75 AGGCATTACAAAAGGGCATAGATAAGGAAGGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGGGGTCAA chr4 + 94230402 65168933 65168932 65169007 65168933 65168932 65169007 75 AGAGAGTACAAAAGGCCAAAGGTTGTGGTGATTTAAAAGGAAAAAAAAAAAAAAAAAAGGCAAATCTAAGACCAA ..:x.x.........x..x..:.x:x.:x.:.x.....::..................::x...xx.::.::... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 28190903 NA +3105 chr4 + 190214555 93390810 93390809 93390874 65 CAAATATGTCTATATATAGATATATGTATACATATTTGTATATATATGTGTGTGTATATATATGC chr4 + 94230402 22600199 22600198 22600263 22600199 22600198 22600263 65 CACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGC ..x.:..:.::.:..::.:.:.:...:.....x.xx.:.:.....x.............::.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 70790611 NA +13325 chr4 + 190214555 93394084 93394083 93395715 1632 AAAAAGCACACATCAGGGAATGTAATTGAAGATAGACTTTTGTTGACCTCAGAAG---AGAAAAGCTCAAAAGAAATTTCGTAAAGTTTT-AAATATGGCAAGAGGACCACAATGTCTTTGATAATTAGACTTTCAACACATTTGGATTTGCTAATTGGATCTAAGTTCTAATTAGGCTTTTTATGTAACTAAGAATGACATATCATTGTATGAATTTAATGTGCTTTTACAGTTGAAACTAACAATTAGCAGCCTTTTCCAAATTATTTTAATAAGGAAAAA------------------GCTGGCTCTGCTGTTTATACTGTGACATTCCCTTCTCTTAAGATATATTATGTACATTTTCATTT----TCTTAATTAAACACCTTTTGGGGAGCTTAAAGGGAAACTTGGGTTTTAATAGGAAGCACCTAAATTGTTTATTTGTGGGGGAGACTTGCCAGCCAGTATGTAGATGACTTTGGAAGCTACAGACAAACCGCAATAAAAAGAAATAAATCACAATCATCAGGAGGAAACAGCACAAATAACCATTTGCCCCTATGACCATTCAGTTAATCAAAACAGTCTCTGAATATGATGAAAGATCTGTTACATTTTTAAGTGTGCACATGCGGAATATGTTCCCAAATGTGAAGGCTCATGGATCTGCTTTCAGGATGAATAATAGGAAATTTCTTCTCAAGATGTGCATTACAACATTCTCTCTCTCTGTAGCCTTGTTCTGTAAACAGTTATCTGCTAATTCAAGTCAAATCATCTCTTTCTTTCTCCATATTTTTGATTGAGAGTCATCAATTTTTATCCCATTCAGATATATAGACAGTAATTTAAAAACTGGTAGCCCTCAGATTTGTACATTCCAAGAGATAAGACCTATATAACAGCATAAAATTAAACTACTA--TTTGGGTGAGTAAAGAGCAGTGAGTCATTGCAAGACTTTAAGGGAAAGGCTGCTGCCAAAATATTCCAAGCAAATTGATAACACTGCCAAAAAGGCAAATTATAT------TGTTTTATGTGCTATGAATACTTTG---------------AAAACAAAGACATACACATG-ATTTTTTTC------------AAATAAAAGCAGTTGCCCTTCTAACCATATTAAAAATAGTGTCTTTTTTCCCAGTAA-AAGCCATATAAGATCAAATTAAAACCATTGAAACT-----ATTAGAGAATCTAACTTACAGTA--ATTGATATATTAAAAAAGACATTATGTTAGAGTTATATGTGCTATTATTTTTCCAATTAGTACATTACTGGGACTGAGTGATTGGTGTATACATAAGTCCTCATTAAGT--AAAATGTCCTCAATGAG---------CCTCCTAAAGC----------------------------ACATTGGGTACTGTCATGTGCCATATAATGATATTTAAGAGCAAGAAATGGCATATCTAATAACTTCATTTCCTATTTAAAAAGAAAACC-TGTGCAGTACT--------CTTTCCATACCAATTATTCTAAGAGCTA-----------TCACATAGTTCTCCATAAAGACTATACAGAGGTGATGGGACTGTTCTTCAGGCAGAAAAATGACCAAAGTTGTCTTATCTTTCAGCTTGGTTGCTGGAATCCTGTCACAGGTCTGAATGGGTCACTGACTGACAAGAAATTGGAGAATAACATGCGTGGAGTGGTTCTACGTGTAGTAACTGTTCTGGTAAGTA chr4 + 94230402 38068395 38068394 38069860 38068395 38068394 38069860 1466 AATATGTGCGCATTGATGTATGTAATTTAAAATGGGCTCT----AACCTCAAAAGGATACAAAGGTTCTTCAGAATTTTCATAGTGTTTTTAAATCTGGTAAAAGTAGTACA-------TGGTAATTAGACTTTCAACACATTTGGATATGCTAATTTGAACAAAGTTCTAATTAGTCCCTTCATGTGACTGAGAATGACA-ATTTCTGAAATAATTTCATGTACTTGTAT--TCTGAACTTAAAGTTG------TTTTCAATATTCCTAATACAAAAAAAAAAAAAAAGAGAGAGAGACTGTTGATTGCTTTGCTTGTA---TGGCAGTGATTTATTCCATGCAGTGTAAGGTGCATATGCATATAGTACATTCACTGTGCACCATT------------------------------ACTGGTAACACACTA---------TTGCAGTTAAGACTT------TAATCTGAAGCTG---TTGGACACCTCTGGCAGT--------------------------------GGAGGAATGAGGA------------------TATGG----------AATGTCAGCAATCCCTCAGTACTA--------CTGTTA-ATAGCTAGGAATGC---TGTGGAGGAGGTAC-----TGAGGAAGC----AGAACTGGCTCCA----------------ACGTCCGCTGAAGTCAGTCATT-------------CTTCTGTTG---TTTTTTGAAAATAATCATCTAC-------------------------------CttatttataaattatattaatCA-------TACTAC-CAGA-ATGTAG---------TAAAGTCTTGTGTTC---------------------AGACAGAA--TAAATTACAGTTCATAAT----CTACTAAATTCAGAT---TAAAAGGATGTTAGTCTTAGAGATATCCCCAAGCAAAAGCTTCCGTCCATAGAAACCCAACAAATAAATAGCACTG------GGGCAAAACATCTCATAGCTGCATTCCTTCCTCTCCACTCTCTGTTGCAGTCCTTTCTCAGCACTCTAGTGTGCTTATGTGTCTTTTTCTTAGTTGTCTCTAAATGGAATC---------TTTATCTTGGCTAAAAAGCGCTGCTGTTTCATTACCAATGAGTAATATAAGTTTTAATTAAATCTAGTTAATTTCTTTTGTTAGAG--------TTCCACTAGGAACGATGGGCTGGAGCAGACAGCATGTTGAAGTTATGGTTGCTATTATTTTTCCAATTAGTGTATCAGTGGAAGTCAG--GTGGAAGTATTTTTACAGCCTTACCACATTTCAAATATTTTCTATTAATACAGAAGCCCTTCCCAAGCTCTTCAAAAGCAATATGTATTCCTCCAAATACTGGATGCTGTCATCCATTATGCTCTAGTATTTAAAGGCAC-AACTGATATCCCTAATTGCTTCACTGGGAATTTAGAGATAAATCCACGCGCAAACCCTTATCCGACTTTACATCCCATTGATTCTAGAAGGTACTCTGTGTATTTCCTATGTTCCTGCTTGAAGGTGCCTAAGAGG-AATGAGTTTAT-----GGGCAACACAGAAACAACCTCTGCTTTCTCTTTCAGCTCGGCTGCTGGAATCCAATCACTGGTCTGAATGGGTCCCTAACAGACAGGAAGCTGGAGAATAACATGCGAGGAGTGGTTCTGCGAGTGGTGACTGTGTTGGTAAGCA ..x.x.::.:...:::x.x........x..:..:.:..:.----:......:...---.x...:.:..xxx....x....:..:x.....-....x...:..:..x.x:...-------..:..........................x........x..x.x.............x.::..:....:...:.........-..:x:..x.xx.....x....:...x..:--.:x:....x.x.:..:------.....x.x...x:.xxx.:..::.....------------------.:..::.x:x:..:..:..---..:..x.xx:..x.:::.x.xx:.:.x.x..:...x.x...x.----:x..x.:.:x:....x..------------------------------.:x..x.:...x:x.---------...::.xx:......------:.:.x..x..x..---.....x:.:x.x.:..:x--------------------------------.......xx..x.------------------....:----------...xxx.:..:..:..x.:..:x.--------......-..xx:..:.x:...---..:...:x.x..x.-----..x.:.:..----:..x...x:.:..----------------.:x..:x..x...x::xx....-------------::.....x.---.x..:..x...:.:.:....:.-------------------------------.x.....x.:.x.x.x.x.x....-------.x.:.:-....-..:...---------....:x..x..:x:.---------------------...:.::.--..x..x....:x:.x...----......--..::.:.---....::.xx..x....x.x.x:.x.::::x.:.x...:...x.:.:.x.x.x.xx..x.:.....x:...:.....------:......x:..x.------..:x..x:x.x..x.xx.:x..:..---------------.:x..xxx::::.:.x:...-:.:......------------....::..x.---------.:..x.:xx::......xx.:xx..x...:x::.x:..-:..:x.......x.:x.......x.:.x.x..x:.-----:......--------..x..x..--.x:...:x::.::.:x.....x:.....::......:xx......................::..:.x...:.x.x..--:.x.:x....x:x..x:x...:.::.x:.--x....:.::..x..x.:---------...:.:x....----------------------------.:.:...:.:.......x::::..::xx.::.......::...x-..x..::..x:.....x:.....:.xxxx.....:.:.x...x..-:.:...:xx.:--------....x...x...x.x......::..x..-----------..x:..:x.:..x.x.:...::xx:xx.....-:...:.x:.:.-----:....:x.x.:x:..x.xxx:..::..x..........:..:...........x:....x..............x..:..x....:...::................x...........:..x..:..:.....x:.......:. 40M4D11M3I32M1I21M7D82M1D29M2D16M6D28M18I19M3D43M4I18M30D15M9D15M6D13M3D18M32D13M18D5M10D24M8D6M1D14M3D14M5D9M4D13M16D22M13D9M3D22M31D24M7D6M1D4M1D6M9D15M21D8M2D18M4D6M2I7M3D76M6D13M6I25M15I20M1I9M12I10M9D38M1I35M5I7M8D8M2I78M2D29M2I17M9I11M28I44M1D45M1I11M8I28M11I32M1D11M5D145M 873/1337 65.3% 1466/94230402 0.0% 424/1337 31.7% 55325689 NA +3877 chr4 + 190214555 93398252 93398251 93398319 68 AACCTAGAAGAAATTGAAGAATAACATGCAAGGAGCGATTCTACGTGTGGTAACTGCTCTGGTAAGTA chr4 + 94230402 38069793 38069792 38069860 38069793 38069792 38069860 68 AACAGACAGGAAGCTGGAGAATAACATGCGAGGAGTGGTTCTGCGAGTGGTGACTGTGTTGGTAAGCA ...xx.x.:...::..:............:.....:.:....:..x.....:....:x:.......:. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 55328459 NA +3637 chr4 + 190214555 93404480 93404479 93404572 93 GAATGTAGGCCAGGTATTTAAACTCTATGATTCT--GTTTCTTCATCTGTACAATGGAGATAATATAAATTACCTACCTCATAAAGCTGTTATAA chr4 + 94230402 83501141 83501140 83501235 83501141 83501140 83501235 95 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGA ..x.x.:...x.:x..:....x..x....xx:..--....:::..:.....x.......x.:...xx..............:.::.x.:..:.:. 34M2I59M 65/93 69.9% 95/94230402 0.0% 2/93 2.2% 9903339 NA +3234 chr4 + 190214555 93407704 93407703 93407788 85 TCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTCGT chr4 + 94230402 34908174 34908173 34908258 34908174 34908173 34908258 85 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGGT ..x..x::.....xx...x.:...........:...x....:.....:.xx..::.xx.x.x:..x..x..x..x.....:.x.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 58499530 NA +3152 chr4 + 190214555 93407707 93407706 93407786 80 TCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTC chr4 + 94230402 34908174 34908173 34908253 34908174 34908173 34908253 80 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTC ..x..x::.....xx.:.x::...........:...x....:.....:.x:..x:.xx.x.x:..x..x.....:..... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 58499533 NA +3151 chr4 + 190214555 93407716 93407715 93407800 85 TCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTCGTCCTCCTCCTCGT chr4 + 94230402 34908174 34908173 34908258 34908174 34908173 34908258 85 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGGT ..x..x:......xx...x::...........:...x....x.....:.xx..x:.xx.x.xx..x..x..:..:.....:.x.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 58499542 NA +3011 chr4 + 190214555 93407725 93407724 93407806 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTCGTCCTCCTCCTCGTCCTCCT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........x...x....:.....:.xx...:.xx.x.xx..x..x..x..x.....:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 58499551 NA +3026 chr4 + 190214555 93407731 93407730 93407812 82 TCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTCGTCCTCCTCCTCGTCCTCCTCCTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::.....x.....:...x....:.....x.xx..x:.:x.x.x:..x..:..x..:....... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 58499557 NA +3002 chr4 + 190214555 93407737 93407736 93407818 82 TCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCATCCTCCTCGTCCTCCTCCTCGTCCTCCTCCTCTTCCTCCT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x:x...........:...x....x.....:.x:..x:.xx.x.xx..x..x..x........:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 58499563 NA +10171 chr4 + 190214555 93407888 93407887 93408184 297 TTTTTAACCATTGCTAGTGGTATGATTTTTGAATTGGGAAAACAAAATATTCAGACTAAATATTTTCCCAATGATTCTTATGTAGAGTAATGTACTTTGCAATTCAATTAAAAATAACAAGCTAGGATGGTGTTCTGAGCCAAATGTAATCTCCAAGACCATGGTCAGTAAAGTACTCAAGAAAA--AAGTA-TTGAGGCCGAGTAGTC---TGAAGTCTACTGGGGAATAAAGAAGCAGCTGATTAGCATTTGAAAGCAAGGTCTTTCACTGTTTTAAAAGT---GAAGGAGAATTTTTTAACAG chr4 + 94230402 38077068 38077067 38077370 38077068 38077067 38077370 303 TTTATAACCATTGCTAGTGGGAGAATTTCTGTAATGAGAGAATTAAATGTTTCAATTAAAT-TTTGGTCATTGTTTCTAATGTGAAGTAATGTACATTGCTGTTCAATTAAAAATAACAAGCTGCTGTGGTGTTCCTAGCCAAATACAATCCCCAAAACAGCGGTCAGTAAAGCTGTTGAAGGAATTAAGTATTTGGGGCTGCTTATTTCAGTCAAATCTTTTGGGGAAAGAAATGCCAAATAGCAAGTAATTAAAAGTGGAGGGTT--ATTCTTTTATGAGTTGAGAAAAAGTAATTTTGAAGAG ...x................x.x:....:..x.x..:..:..:x....:..:x:.:.....-...xx:..x..x....x....::..........x....x:.....................:xx:........:x........::....:....:..x::...........:xx.::.:::..--.....-...:...:.xx..x.:---.x..:...x:.......x:..:x:x..:x.:::x..:.x..:....::::.xx..--.:.x.....x:...---...::..x.x....x..x.. 61M1D123M2I5M1I16M3I55M2D14M3I20M 205/294 69.7% 303/94230402 0.0% 12/294 4.1% 55330820 NA +12994 chr4 + 190214555 93422760 93422759 93422997 238 TTTCCATGTAGGAAGAACCTTTTGTGATGGTCTCTGAAAATGTCTTGGGTAAGCCGAAGAAATACCAGGGCTTCTCCATTGATGTTTTGGATGCCTTATCTAACTACCTGGGTTTTAACTACGAAATTTACGTAGCACCGGATCACAAATACGGAAGCCCACAAGAAGATGGGACATGGAATGGCTTGGTAGGAGAACTTGTCTTTAAGGTAAGA-----ATTACTTTATTTATTTGTCTCAT chr4 + 94230402 38079762 38079761 38080004 38079762 38079761 38080004 243 TTTCTCTTTAGGAAGAGCCCTTTGTCATGGTGTCTGAGAATGTTCTGGGAAAACCAAAGAAGTATCAGGGCTTCTCAATAGATGTCCTGGAAGCTTTGGCCAATTACCTTGGCTTTAAGTATGAAATTTATGTTGCACCAGATCACAAGTATGGGAGTCCTCAGGATGACGGGTCATGGAACGGACTGATAGGAGAACTAGTATTTAAGGTAAGGTTGTTAATACGTTGTTTAATAATGTCAT ....:x.x........:..:.....x.....x.....:.....::....x..:..:.....:..:...........x..x.....::....x..:..:x.:..:.....x..:.....x..:........:..x.....:........:..:..:..:..x..:..x..:...x.......:..x:..:..........x..x...........:-----.x...x..:....x.x:.x.... 215M5I23M 183/238 76.9% 243/94230402 0.0% 5/238 2.1% 55342998 NA +3041 chr4 + 190214555 93448819 93448818 93448890 72 CCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCT chr4 + 94230402 55189100 55189099 55189171 55189100 55189099 55189171 72 CCCTCCCCTTCCCTTCTGTTCCCTTCTCTCTTCCACCACCACCTATTATTTGCCTTACTTTTCTCCTTCTCT ....:...........:x........:..:::.:x..x::x..:x.:x:..x..:.x.::...:.....:.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 38259719 NA +3696 chr4 + 190214555 93448896 93448895 93449030 135 TCCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCCTTCCCTTTCCCTTCCTTCTTTTCTTCTTTCCTTCCTTCTTCTCCATCTCCCTCCTATTTTTCCTCCTTCCCTTTTTTTTCCACCCTTTCTTC chr4 + 94230402 50176282 50176281 50176415 50176282 50176281 50176415 134 TCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCC-TCCATTCTTC ..:....:.:.:.::.x:..x:..x...::x:x::x:.::::..x::....x:x...x..:..x.........:...:.:xxxx:...:.....:x:.x.:..x:.......::..:...:...-:..x...... 124M1D10M 79/134 59.0% 134/94230402 0.0% 1/134 0.7% 43272614 NA +3171 chr4 + 190214555 93448944 93448943 93449020 77 TTTCCCTTCCTTCTTTTCTTCTTTCCTTCCTTCTTCTCCATCTCCCTCCTATTTTTCCTCCTTCCCTTTTTTTTCCA chr4 + 94230402 68624542 68624541 68624618 68624542 68624541 68624618 77 TTTTCCTACCTTCATTTCCATTTTCCTACCTTCATTTCCATTTTCCTACCTTCATTTTCACTTCTGTTTATTTACCA ...:...x.....x....:x:......x.....x.:.....:.:...x.:x.:x..:::x....:x...x...x... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 24824402 NA +23124 chr4 + 190214555 93455627 93455626 93455988 362 CTGTTAATGTAT--TCCTTTCTCTTTCAATTTC-TCAGAGAGCCGACATAGGGATTTCTGCTTTAACCATCACTCCAGATCGTGAAAATGTGGTGGACTTTACGACACGTTACATGGACTACTCAGTGGGGGTACTACTTCGAAGGGCTGAAAAGACAGTGGATATGTTTGCCTGTCTTGCACCATTTGATCTCTCTCTATGGGCTTGCATTGCTGGCACAGTCCTTCTGGTGGGTCTACTGGTCTACCTCTTGAACTGGCTTAATCCCCCACGATTACAAATGGGATCAATGACGTCTACTACTCTCTACAACTCCATGTGGTTTGTGTATGGATCTTTTGTACAACAAGGTAAGGAGCAAAAG chr4 + 94230402 38088877 38088876 38089241 38088877 38088876 38089241 365 CTGTTCACGCATGTTATTCTCTCTTCCTCTTTCCTCAGAGAGCTGACATAGGGATCTCTGCCTTAACCATCACCCCCGACAGAGAAAATGTGGTGGACTTCACAACACGTTATATGGACTACTCGGTGGGCGTGCTGCTTCGGAAGGCAGAGAAGACAGTGGACATGTTTGCCTGCTTGGCACCATTTGACCTCTCCCTGTGGGCATGCATAGCTGGCACCGTGCTACTAGTAGGGCTGTTGGTCTACCTCTTGAATTGGCTCAACCCTCCTCGCCTTCAGATGGGATCTATGACCTCCACAACACTCTACAACTCCATGTGGTTTGTGTACGGATCCTTTGTGCAACAAGGTAAGAGACAGAGG .....x.:.:..--.x:.:......:.xx....-.........:...........:.....:...........:..x..:x.x.................:..:........:...........:.....x..:..:.....:.:...x..:...........:...........::.x...........:.....:..:.....x.....x........x..x..x..:..:..x..::................:.....:..:..:..x..x:.x..:........x.....x..:..x..x..........................:.....:.....:............:::..:.:. 12M2I19M1I331M 295/362 81.5% 365/94230402 0.0% 3/362 0.8% 55366750 NA +9295 chr4 + 190214555 93467606 93467605 93467843 238 CTTCTGTGCTATTGTTGTACTGATTAAAGGGTTAAGGCCACTTAGCCTTT--AGTCCTCTGCCTTACATCACCACCCAAGGAGTGCTATAATCCTCTAGAAATGCATTGCCTGCAGTGTGGCACTGCTTAATAAATCACTCCATCTTATTTATCTTTCTCTTGACATATAGCTAGCAGCAGGAA-CCATTATCCTATGACAATGTTAAGTTCTATTGACATTTTCTCTTAATTAACTACAC chr4 + 94230402 38094240 38094239 38094466 38094240 38094239 38094466 227 CCTCTAAGTCATTATTACACTTCGTGGATGGTTAAAGCTGCTCAGACTTCTCAGTCTTGTTCCTTGTATTACCACCCAAGGCATGATATACGCCTCCTGAAATGCGCTGCT-----------GTTGCTTAATAAATTCCTCTATCTCACTTATCTTACTCTTGGTACATCCCTATCAGCAGGAAGCCATGATCCAATAACA---TACATTCCTGGTGACATTTCCTCTTAATTAACTATAC .:...:x.::...:..::...xxx.::.x......:..::..:..x...:--....:.x.x....::..:...........x:..x....xx....:x.......::...:-----------::............:x...:....:.:.......x......::.:..xx...x.........-....x....x..:...---.xx.x.:..:x........:..............:.. 50M2I59M11D62M1I16M3D37M 163/224 72.8% 227/94230402 0.0% 17/224 7.6% 55373366 NA +11529 chr4 + 190214555 93490622 93490621 93490783 162 TTTGCTTCTTTCT-ACAGGCGGGGAAGTCCCGTACACGACTCTGGCTACCCGAATGATGATGGGGGCTTGGTGGCTATTTGCTTTGATTGTTATCTCATCTTACACGGCAAACCTCGCTGCTTTCCTCACTATTACACGCATTGAAAGTTCCATCCAGTAAGT chr4 + 94230402 38111678 38111677 38111840 38111678 38111677 38111840 163 TTTCCTTCTTTCCCACAGGAGGAGAAGTCCCATATACAACCCTGGCAACACGACTGATGATGGGGGCTTGGTGGCTTTTTGCTTTGATTGTCATCTCCTCTTACACAGCAAACCTAGCTGCTTTCCTCACCATTACGCGCATTGAGAACTCTATCCAGTAAGT ...x........:-.....x..:........:..:..:..:.....x..x...x......................x..............:.....x........:........x..............:.....:........:.::..:........... 13M1I149M 140/162 86.4% 163/94230402 0.0% 1/162 0.6% 55378944 NA +3073 chr4 + 190214555 93511774 93511773 93511835 62 TTCTTCTTTTTTTTTTTTTTTCTTTTCTGAGAATGAGTTTTGCTCTTGTCGCCCAGGCTAGA chr4 + 94230402 47243551 47243550 47243612 47243551 47243550 47243612 62 TTTTTCTTCTTCTTCTTCTGTCAGTTCTGAGAATGAGTTTTGCTGCTGCCAAAGAGGTTAAA ..:.....:..:..:..:.x..xx....................x:..:.:xxx...:..:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 46268223 NA +17843 chr4 + 190214555 93515081 93515080 93515418 338 AAAACAATAAAATAAGAAAAGCAA----------TTTGATATATGTTTCCACACATATTGCCTTTTTTTTTCTTTTAACTTTATTCCCACTTGAAAATACTCAGTAATGTGTCTCTTGTGTCTCTCTTCTCTCCCAATAATCAAGGTCTCTCCAGGACCTTTCCAAGCAAACAGAAATCCCTTATGGCACAGTCCTAGACTCTGCGGTATATGAGCATGTCCGCATGAAAGGACTGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATGGATCGGAGAACAATGTTCTGGAGTCCCAGGCAGGCATTCAAAAGGTACTGT chr4 + 94230402 38121115 38121114 38121458 38121115 38121114 38121458 344 AAATTAGTAAAAAAAAAACAGCAAAAGAAACTGGCTTGACAGCCATCTCTTTATATGTTACCCTTTTCTCACCTGCAGCATC--TTCCTCTTGAAAATGC--AGCTTTAAGTCTCCTATGTCTCTTTTCTTCACCAACAATTAAGGTCTCTCCAGGATCTCTCAAGGCAGACGGATATTCCTTATGGCACTGTCTTGGACTCTGCAGTCTATGAACACGTTCGAGTGAAAGGCATGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATTAACAGAAGTAACGGTTCGGAGAACAACGTCTTGGAGTCGACTGCAGGCATTCAAAAGGTATTGT ...x:.:.....x..:..x.....----------:....:.xx::.:..:x:.:..:..:..:....:.:x.:.x:.:.x.:--.:..x.........:.--..:xx.:x.....:.:.......:....::x....:...:...............:..:..x.:...:..:..x..:...........x...:.:........:..x.....:..:..:..x:.......xx.................................................:...x....:..:..x...........:..::.......xxxx..................:... 24M10I48M2D16M2D246M 256/334 76.6% 344/94230402 0.0% 14/334 4.2% 55393966 NA +3218 chr4 + 190214555 93517858 93517857 93517923 66 CTTCTTCTATAATATCTTGGGCAAGAATCCATATATATATATATGTATGTGTGTGTGTATGTATAT chr4 + 94230402 23063136 23063135 23063201 23063136 23063135 23063201 66 CTTTTGTCATAAGCCCTTGTGCAAGAATACTTGTAATTATATATATATATATGTGTGTGTGTGTAT ...:.x::....xx:....x........x.x.:..xx.......:...:.:.......:...:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 70454722 NA +3447 chr4 + 190214555 93524690 93524689 93524806 117 CAATGTGT-CAAGTTTTA--TAGCAGACAAATCATACTACAAATAC-----TACAAACAAACATGTTTTTCTAGATGCCAAGAAAAAATATATGTATGTATGTGTATATATATATATATATATAT chr4 + 94230402 85548351 85548350 85548473 85548351 85548350 85548473 123 CAGTGTGCACAAATTTAAAGTAAGAGACAAACCAGACCATTGTCACATCTGGACAATCAAAA--GCTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..:....:-...:...x.--..:x.......:..x..:.:x:x:..-----x....x....x--.:.:...x.:.x:xx..:..:.:x...........:....:...:..........x..... 8M1I9M2I26M5I11M2D61M 82/115 71.3% 123/94230402 0.0% 10/115 8.7% 7976339 NA +3007 chr4 + 190214555 93524761 93524760 93524810 50 AAGAAAAAATATATGTATGTATGTGTATATATATATATATATATATATAT chr4 + 94230402 85548424 85548423 85548473 85548424 85548423 85548473 50 AAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..:......x.xx.:...........:.::...:..........x..... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 7976337 NA +3524 chr4 + 190214555 93548037 93548036 93548137 101 CACGGTGGTGCGCACCTGTAATCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATCACTTCAACCCGGGAGACGGAGGTTGCGGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:.......--..x....:.:...........::...x....x.xx.x...x.....x.....:.:..x:xx:..:..::.------:.x...:..... 11M2D70M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 17514840 NA +3684 chr4 + 190214555 93560090 93560089 93560253 164 CTAGGGGATGGATAGC-ATTAGGAGAACTATCTAATGCAGATGATGGGTTGATGGGTGCAGCAAACCGCCATGG------CAAGTGTGTACCTACGTAACAAACCTGCATGTTCTACGCATGTATTCCAGAACTTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 13642856 13642855 13643018 13642856 13642855 13643018 163 CCAGGAGATGGAGAGTTATCCTGGGAGCAGGCTGATGGAGAT-ATCTTCCG------GCAGCCAGCCAACAGGGAAGCCGTAAGTGTG-ACCTATGATTTAAAGACACATTTTCTACCCATGCATGCCAGTACATTGGGGGAAAATAGAAAAAAGAAAAAAGAAAAAAGGA .:...:......x..:-..:xx.:..:.x:x..:...x....-..xxx::.------.....x.:..:x..x..------:.......-.....:.xxx:...xx::...x......x....:..x....x..x.x::.x:....x.:......:......:......::. 16M1I25M1D8M6D17M6I8M1D82M 105/156 67.3% 163/94230402 0.0% 15/156 9.6% 79917234 NA +3928 chr4 + 190214555 93566630 93566629 93566722 93 CATAGTGGTGCGCAGCTATAATCCTAGCTACTTGGGAGGCTGAGGTATGAGAATCGCCTGAACCCAGGAGATGGGGGTTGCAG----TGA-GCCAAGC chr4 + 94230402 76033197 76033196 76033292 76033197 76033196 76033292 96 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGC ..:........:.:--.:..:.:.:.........::........x:x..x...x.:.:.........:..x.xx...:..:..----...-....... 14M2D67M4I3M1I7M 69/91 75.8% 96/94230402 0.0% 7/91 7.7% 17533433 NA +3056 chr4 + 190214555 93575540 93575539 93575618 79 ATTTGACCTCTTTGAGCCTCAGTTTTCCCATTTGCAAAATGAGGATAATAATGGTTTCTTCCTTCACATGATTGTTATA chr4 + 94230402 51382305 51382304 51382383 51382305 51382304 51382383 79 ATCAGACTTTTCTGTACCTTAGTTTCCCCATTGGTAAAATGCAGACAACACCATTACTTTCCTTCATACAGTCACTACA ..:x...:.:.:..x:...:.....:......x.:......x:..:..:.x::x.x::........:.:::.:::..:. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 42193235 NA +3201 chr4 + 190214555 93606137 93606136 93606209 73 TGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCACTTTTACCCGGAAAACAGAGACTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.:....:...........::........x.:x.x...x.....xx....:...:x:xx:.:...:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 17572932 NA +12470 chr4 + 190214555 93626221 93626220 93626440 220 TTCCAACTTTAAACCCTATTTCTTCTTTTGTTCTTCATTTTTTCACAGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATGACCCAGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATGTTTTTTCACAAAGGTAAG chr4 + 94230402 38147867 38147866 38148086 38147867 38147866 38148086 220 TTCGGACTTGAAAGCCCATTATCTAAGATCTTGCTCTGTTTACTGCAGGTGAAACATGGGAACTATGCCTTTGTATGGGACGCAGCAGTGCTGGAATATGTGGCTATCAATGATGGAGACTGCTCTTTTTACACGGTTGGGAACACTGTTGCGGACAGAGGATATGGAATTGCACTGCAGCATGGCAGCCCATACCGAGATGTTTTCTCACAGAGGTAAG ...x:....x...x..:...x::.xxxx.x..x:..xx...x:::.....:...:....:..:.....:..:........:.....x..::......................:xx...:..:..:........x:....:..:........x..:x.:...............:.:..:........:..x..............:.....:....... 220M 168/220 76.4% 220/94230402 0.0% 0/220 0.0% 55478354 NA +3512 chr4 + 190214555 93628038 93628037 93628116 79 GTGGTGCATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAGCTTGGGAGGTGGAGGTTATAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.::..........::........x.x..x...x.:.....:.:::.:..x.xx:..:.:... 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 17594837 NA +22482 chr4 + 190214555 93654226 93654225 93654901 676 AACATCACTTCATTTTGCTTCCAATAGAAGCCCAGGCACAAAGAGAAA----TGATA---------AAACTCTGGCCCCTGCTTTATTCATAAAACACTTTGCAGAGTGCATTTAGTAATTTGCCATTGTAACCACTGGCACTAAGAGCTTTCAGGGCCGAGTTCTGATGCTGTATTTAGTTCATACTTTGACTGCTCAGCTAAAACTTCC-ATTTGTATGCATTTATTCTGCTTCACACATTATGTTGTCAGTCACTTGCAATATTTCAAAGTCACAGCAGGCTTTTTCTGACACATATTTGTCAGAATGAACTGCCTTGATTGCTATTATTACAGACTATAGTGCCTGAGTAAGGGGAAAAAAAACTTATGTAGTACCAGAATATTGAAACTGCCTAATAAAACAATAGATACAAGAGAATAAAAATAGA----------------ATAAATGCATATAAATGGATGCTTTAAAAGGCCAACAAAATGTAGGATTACAAAATAGACATATAGAACCCAAAAACC--CATTCATAAAAAGGATTGGAATTTTTTGAAAATGAT----AAGGAGCCG--AATGAGAAAATTCCACTGCCCCAGTGTCAGTGAGTAAGT-GAGTATCACATACTTC--CTTTCCAGTAACCAGGGATTTAAGTAGACTCTGCTAATGGATGCTGTCATTGAGAGAAATTTTAGCATGAAATCTCCTAC chr4 + 94230402 38157050 38157049 38157734 38157050 38157049 38157734 685 AATGTGATTTCGTTCTGCTTT------ATGGCTAAGTGCAAGTAGAAAACGATGATATGGCCAAGGAAAAACTGTGCTTGCCTCTATTCTTAAAGCACTTTGTAGAGTGTATTTAGCAATTTGCCACTGTACCCACCTGCATGTAGAGCTTTCAGTGCAAGGCTCTGACACTGTATTTAGTTCATACTT--ATT--TCAGCTACAACTTCCCATTTGTATGCATTTATTCTGCTTTGTACATTATGTTATCAGTCATTTTCAATATTTCAAAGTCACAGCAGTCTTTTTCTGACAC--ATTTGTCAGAATGCACTGCCTTGATTGCTGTTATT--AGACTGCAGTTCCTGAGCAAGGG---AAAAGTCTTATGCAGAACCAGAACAATGAAATTGCTCAATAAAACAATAGATTAAGTGGAATAAAATTAGATGACCAGCCCTCCCCCCCAAACACACACACACACA------AAAA----AAAAAGAGACAGGAGTGCAAGGCAGGTTTTATAATCCCACACAACAAAATTAATCAGGAAATATCTAATTTTTTAAAGCTGATATTCAAGGAATTGGAAATGACTCTTTTCTGCTGCC----TGGTAGTGAGTCAGTAAAGTATGTCTTACTTTGACTTCCTGTTAATCAAATGCTGTATTGTATTCCTCTAATGATCACTCTCAAC-AGAAGGATTTTAATAATCAGTCCATTAC ..::.x.:...:..:.....:------.x.x.:.:.::...:x.....----.....---------...xx...xx.::xx..:.....x....:.......:......:......:.........:....x....:x...:xx...........x..x::.:.....::...................--.:.--.......x.......-.......................:::..........:.......:..x......................x.............--.............x...............:.....--.....::...x......:.....---....:x......:..x.......:.x.....:...::...............xx.:x:........x....----------------x:...::..:.:.x.::x.------....----..x..:.x::....x.:...:::..::x.xxx:.x....x.x.x.--x...x..x.::.::xx.xx........:..:x....----.....:::.--.....xxxxx...::.....----..x:.......x...-:.....xx.x.....:--...:.::x...:..::x::.xx.x.:x.:..:x......:x::..x...x:-...:::......::.xxx.:..:x:... 21M6D21M4I5M9I123M2D3M2D15M1I84M2D35M2D23M3D71M16I19M6D4M4D45M2I36M4I9M2I20M4D15M1I16M2I51M1D28M 471/644 73.1% 685/94230402 0.0% 73/644 11.3% 55497176 NA +3245 chr4 + 190214555 93656813 93656812 93656908 96 GAGCGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAATAATTCCAGCTGTCATTTCAATTGAATTTTCCATAAGA---GGTTCAATT chr4 + 94230402 7417632 7417631 7417730 7417632 7417631 7417730 99 GAGCAATGAGCTGGTTTACAAAAAAAAAAAAACAAAAAAACAAAACAACAAACACCTGCTATCAGCCTCACTGAATATTACTAAAAATTTGGTTTAACT ....:.x:xx...x:.:.x.............x.......x.......xx..:x..x...:...x:::x.:.....x..x.xx..:.---....:..:. 87M3I9M 66/96 68.8% 99/94230402 0.0% 3/96 3.1% 86239181 NA +12369 chr4 + 190214555 93697947 93697946 93698505 559 CTTTCTTCTATTTTCTATTTTTAAAATTACTGG-ATTCTGCTTATATTT-----GATCTATGCTTACTATA---AAAGTTTACGGGATATTTTTGGTAACTGCACTTTCAAAACTCTTAATTATAACTCTTGTACATATGCTGATAAGAGTAATTAGTCAAATGTTTTCAGGTTCACTTTTCAACTCTGTCAAACACTTTTATAAGCTAT-CATTTGGATCATTTTTTCTCTCC-----TCCTTCAAAAAATTATAGAAATC---GCTGTGAATTCCAAATGCGTGTCTGTTTTATTCTGTTAA-----ATCAGATACTTATACTGACAACCTATCAATACACTAAATTAGTACAT--GTAGCTAACAAGCATG-TACAAGTTTAACTGCTGTATAACAACATTTAACAGATCAACAAACACAACAGCTTGTCTCTGCAGGGTTTAATAAACCATATTTATCCACAGCATCTGAGAAAAACAG--AAGAGACTCTGATATATGTTATGTTCTTTTTATAAGTACATGAAAA-TAAATATGTAAAAGTAAATGTGGTTTCTATTTCTATTCGTGAGAGTAGAATGTACT chr4 + 94230402 38172651 38172650 38173225 38172651 38172650 38173225 575 CTTTATTTTCTTTATTTCTTTTTGTCTTATTGGTGTACTGCTTTCATTTATATTGAAATCAGCTGGCAGAAGATAAAGTTCACAGCATATATTTAGAGCCAATGTTTTTGAGACCAGTAATTATTATTTTCCTCCATCTTTCCTGGGAAACTGCTGGTGATTTGTTTTCAGGTTCATTTCATGAGTGTTT-----ACTGTCATTTACTATGAACTCTGGTCTTTTCCTTTCTCTGCCTGTCCCTCAAAATGCTGACCACATGCTGGCTCTGCTTTGCATTTCTGTATCTGAGTTTGTATTTTAATATTCATTAGGTATTTGTACTGACAGCCCATCAATACATTAAATTAGTATATACGCAGCTAACAAGTATGGTACATGCCTAACTGACTTATAACAACATTAAA-------ACAGACAGAACAGATTGTCTCAGCAGGGTTTAATAAACTGTACTTATCCACAGTCCCTGTGAAAAACAGGCATACAACTGCAACATACAGTGCTCCCTTGGAATCAGAAGACCAACATTAAACATACTAAACTGAATGTGATTTGTTTTTCTGATCA-GAGAACTGAACTTTCT ....x..:.x...x:.x:....x:xx...:...-:.x......x:....-----..xx.xx...x:.x:x.---......:..:.x....x...:.x:x.x::::...::.:..:xx.......x.:.:.:x.x...x.x::xxx:::.::x::.:..x.xx..............:..:x::.x.x.x.-----...x.:..xx:....-x.:.:x.:..x...::.:....:-----...:......x::.:xxx.x..x---...x..xx..x..xx.x:..:....xx..xx.x.x....-----..:..:..:..:........:..:.........:..........:..--.:..........:...-....x.::......x:x............x..-------...:...x.....x.......x................::..:..........:x:...x.........--.x:x:...x::.:...::x.::x::...xxx..x..x.x.:x..x.-....:..::x...x.:......:...x.x.....:x..:-....::x...:x.x.. 33M1I15M5I17M3I116M5D15M1I23M5I23M3I39M5I47M2I16M1I32M7D69M2I46M1I39M1D16M 358/546 65.6% 575/94230402 0.0% 42/546 7.7% 55525296 NA +18677 chr4 + 190214555 93700699 93700698 93701232 534 TCTTGCTGCTTAAGCAAATGAGGCATTAAGGCTGTTT---TGTATTCCTGTGG---GCTATCACTGTCTGTACTGACAATGCAGTGGTGCCTG-CTGCTTGAGATAGGGGTAGGAAGGGTGGTTTGGAAGGGGATTGCACGTGTGTGCCATAATGAATCTGTTTTATCTTTGAACAATTCCATATGCTCTTGTGAAGCTATCAATTCT--------TTCTTTTCCTTTTTTTTTCTCCT-----TTTAATGCCAAGATAAATTGATCCTAGATTGCTGCTCCAAATGCTGACACCACTGAATATGAAGGTGTCATTGTAAAATGAACCATAGCAAATTCTTAATAAGCAAGCTTCACAAAGAGTTATAGTTTTTGACATTCAGATATAGACTTATCCCCAGTGAAGGAAGCTTTGTTCAGCCCATGCATGCTAAGAGGAATAAAAAATAAAAAGTAATTTGATTGGTATTAAATATGTTTTATTCCTTCCTATATTGAGCAATCATATCACATGACTTGTCCACTTCCATC---TTACAGGAA---AATTGGAAAAGGAA chr4 + 94230402 38177457 38177456 38177969 38177457 38177456 38177969 513 TCGTGCTATTTAAGCAAACCAGGCTTTAGGACTTTTGCCATGCATTACTCTGGCAAGCTATAATCACCCCAACTG----TGCCTCAGAGCCTGTCTGATTGGGACTGGGG----------GGCTCAGTAATGAATCT----------------TGAATTTGCTTTATCTTTGAATGAGTCCAGATGCTTTGTT--AGATACCAGTTCTGTTCTCCCTCCCTTCCCTTTTTCTATCTCCTCCTATTTTAATGTCAAAATGAATTGATCCTGGGCTGCTCCTCTGTACTCTGACACTCCTGAATATGAAAGTGTCACTGTAAAATGAACCATAGCAAATTCTTAATAAGCTACCTTCAGAGAGAGTTATAGTTTTTGACATTTAGTTATGGATTTATCCCTTGTGCAGGAAGCCTCATTCATTTCATGCATGCTAACCATAGTGAG----AAAAAGT-----------TATTAAGTATTTTTCATACTTTGGTCTATTGAACAGCCACATCACATGCACTGCCAGTCTCCAGCAGGTTGCAGGAGGTTAGTGAGAGCAGGAA ..x....::.........:x....x...:.:..x..x---..:...x..x...---.....x.::::.:xx....----...xx::.x.....-...x...:..:x....----------..:.::.x.:x.:..:x----------------.....:..:............::.x....x.....:.xx.--..x..:..:....--------.:.:..:.......:.x......-----.......:...:..:..........:.::....x...::x.:x.......:x...........:......:.................................x.x.....x.:.....................:..x...:..:.......:x...x.......:.::....x::............xx:x.:.:.:----.......-----------......:...x...:..x.:..xx.x......:..::..:........xx:..:.x:::....x.---..:.....:---.:.x:..:x..... 37M3I13M3I19M4D14M1I16M10D17M16D40M2D13M8I23M5I200M4D7M11D65M3I9M3I14M 363/487 74.5% 513/94230402 0.0% 73/487 15.0% 55523242 NA +3238 chr4 + 190214555 93705251 93705250 93705334 84 TCTTATTTTGAGAAATGTCTATTCA-----GATCTTTTGCCTAGTTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTT chr4 + 94230402 56598524 56598523 56598612 56598524 56598523 56598612 89 tcctgctgtaggcacggtcTATTTACCATAAATTGTTTGCCTAAACTATGCTTTTTTGTTGTTGTTCTTTTGTTTGTTTGTTTTTGTTT ..:.::.x.::.x.xx.......:.-----:..:x........:x:.x..:...x...........x........x...x..:..x... 25M5I59M 60/84 71.4% 89/94230402 0.0% 5/84 6.0% 37106727 NA +3486 chr4 + 190214555 93705263 93705262 93705368 106 AAATGTCTATTCAGATCTTTTGCCTAGTTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTTTTCTTCTTCCTG---AAACAGAGTCTCGCTGTGT chr4 + 94230402 7230401 7230400 7230506 7230401 7230400 7230506 106 AAGCGTATATT---ATATTTCTTCTGTGTTTTTTTTTTTTGTTGTTGTTGTTTTACATCTCTATATTTTTTCTTTTTAACCTTATTGACAAAACTGTGTCTTTCTGTAT ..::..x....---..x...:x:..:xx....x....x................::x...:.x.x:.....:.....xx:...x:..---....x.x....:x....:. 11M3D73M3I19M 73/103 70.9% 106/94230402 0.0% 6/103 5.8% 86474862 NA +3158 chr4 + 190214555 93705269 93705268 93705337 69 CTATTCAGATCTTT---TGCCTAGT-TTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTT chr4 + 94230402 61549782 61549781 61549854 61549782 61549781 61549854 73 CTATTTAGCTTCTAGCATGTCTGGTGTTTTGTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTTGGCTTTTTGTT .....:..x.::.x---..:..:..-........................xx....:.....xx:.....x.. 14M3I8M1I47M 55/69 79.7% 73/94230402 0.0% 4/69 5.8% 32155487 NA +3215 chr4 + 190214555 93705271 93705270 93705321 51 ATTCAGATCTTTTGCCTAGTTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTC chr4 + 94230402 18791498 18791497 18791548 18791498 18791497 18791548 51 ATTCAGATTTTTTTGCTACTGTTTCTTTTGTTGTTGTTGTTGTTCTGTATC ........:....xx...x.x...x...................:...x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 74913773 NA +3062 chr4 + 190214555 93705290 93705289 93705358 69 TTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTTTTCTTCTTCCTGAAACAGAGT chr4 + 94230402 22617883 22617882 22617951 22617883 22617882 22617951 69 TCTGTTTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTTTTTAAAACCTTGCTCTAATGGAGT .:.x.x........:.:......x...x....:.....:.........xxxx:...x..xx..::.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 71087407 NA +3076 chr4 + 190214555 93705292 93705291 93705336 45 TTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTT chr4 + 94230402 90203142 90203141 90203186 90203142 90203141 90203186 45 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATT ...x....................x....:......:...x.x.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 3502150 NA +3162 chr4 + 190214555 93705292 93705291 93705355 64 TTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTTTTCTTCTTCCTGAAACAG chr4 + 94230402 81934681 81934680 81934743 81934681 81934680 81934743 63 TTTTTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTTTC-CCCAGAAAAAG ...x...................xx....:....x.xxx.........:...-:..x....x.. 52M1D11M 51/63 81.0% 63/94230402 0.0% 1/63 1.6% 11770611 NA +3571 chr4 + 190214555 93708704 93708703 93708820 117 TTTATTATCTGTTTTCAGATTGTTTTGTGGTCTTCCCTTCTTTCCTTTCTTTCCTTTCTTTCCTTCTTCCTTCCTTCTTTCCTGTCTTCTTTTTGAGGAAATGATTTTTCTTTGATG chr4 + 94230402 71671573 71671572 71671685 71671573 71671572 71671685 113 TTTTTTTTCCCTCTTCACATCCTTTAAAAGTCTCTGGTGGTTGCCATTCCTTAATCTTCTTTCTTCTTTCTCCCTTTTTTCTTGTCTTC----TGGGATATTTATTTCCCCTTGATG ...x..x..:x.:....x..:x...x:x:....::xx.xx..x..x...:..xx.:.::..:......:..:....:....:.......----..:.:x.x.x....::.:...... 89M4D24M 74/113 65.5% 113/94230402 0.0% 4/113 3.5% 22037131 NA +3089 chr4 + 190214555 93712001 93712000 93712062 62 AGTTTTTTTGTTGTTGTTGTTGTTTTAATACATTAGGGATAAGATTCCTTTGTTGTTTTCAT chr4 + 94230402 6209564 6209563 6209625 6209564 6209563 6209625 62 AGTTTTTTTGTTGTTGTTTGTTTTTTAAGTCATAAGAAATGAGATCCTCTTGCTTTTCTAAT ..................xx.x......xx...x..::..:....:.::...:.x..:.x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 87502437 NA +3048 chr4 + 190214555 93741154 93741153 93741214 61 AGAAACTATATATATATATACATATATATATATATATATATATATATGTATATATATATAT chr4 + 94230402 58988598 58988597 58988658 58988598 58988597 58988658 61 AGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTAT .....:............:...:..:......x.:..:.x.xx...x.:..x....xx... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 34752556 NA +3283 chr4 + 190214555 93745805 93745804 93745885 81 ATATTTTATTTTATTTCTTTTTTGTTTGTTTGTTTGTTTTATTTTGACTTTGTGCTGCAGGCAGAG------TTAATTAACTCTTTC chr4 + 94230402 55690033 55690032 55690117 55690033 55690032 55690117 85 ATTTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTG--TTTTTCCCCAAGGAAGAGAAGAACTCAAATGACTCTTCC ..x.:..x:..x....:...........:...........:.....--...x.x.:xx...x....------.:..x.:......:. 46M2D18M6I15M 61/79 77.2% 85/94230402 0.0% 8/79 10.1% 38055772 NA +3344 chr4 + 190214555 93757817 93757816 93757899 83 CATAGTAGTGGGTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAATCCGGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...:...x::.--....:.:...........:.........x.xx.x...x::......:..:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 17724620 NA +16630 chr4 + 190214555 93758812 93758811 93759238 427 TGAAGAGTGACTCTAAACAGAGATGATCGTTGCCAGTTTCTCACTGCAGAATGAAATATTTTTTCTCCTTTACCCTATAACCCAAATATCACACTGAGCTTAAGGATGAAGCTGACATTTTAAAAGATCACCAAAAGCGTTCTCTTTCCAATTGCAATTATGCCCTCTATCTCAGTGGGAGCCATTGTCTGGGTCTTCTCAGCTCTCTAGCATCTTTCTGGCTTGCTTTCATTACCCTGATTATCTATTCATTTGCCGCCCAGTACTCATTTTATGAAAGATCATGTCTGCCATTTCTGTAATGAGTGCTTGACTTTTACTGCCAGCATAAACACATAAAATATATAATAATTAAAGTTCACTAGTCACCA-AAGTCTTGAGATCCGTCATGTTGCTAATTTGATTTTTTAAGCAATTGCTTCTCCGC chr4 + 94230402 38197370 38197369 38197793 38197370 38197369 38197793 424 TGAAGCATAACTCCAAGCAATGATGATCATTTCCAGATTCTTTTGCTGAAAAGAAAAATCTTTGC--CTGCATCCAATAACCCAAATATCACAGTGTACTTAAGGATGATGCTGACATTTTAAAAGACCACCTAAGGTGTTCACTTTCCAACTGTACATATGCCCCAGGTCTTTGCAGGATTTACTGCCTTTTCCTTTCGAGCTCTCCTGAGTCTTTTGGGCTTTCTTTCTTTTTGCTTTTTATCAAATCA-CTGAAGCCCAACTTTGATATTGGCAAAGATCATAT-TGTCATAGCTGTAATGAGTGCTTGTCTTTTCAAGATAGCATAAACACATACAAAACACAAAAAATGAAGTTTGCTAGTCATTACAACTCTTCAGGTTATTCATGTTAGTCATTTGATGTCATATTTAATTGCTTCTTAGC .....x:.:....:..:..:x.......:..x....x....:x:xx:::..x....x..:...x.--..x:.:..x.................x..x:...........x.................:....x..:.:....x........:..:.xx.......:xx:...:x.::...x::.:..:..xxx:...::x.......:x.x:.....:x.....x.....x..x:x..xx.....x.x...-:..xx.....::x:.x..x..:xx.........:.-..:...xx................x.....xxx.x:..............x..x.:.:..x..x.:.....::.......::.-..x....x..:.:xx.......:x.x.......x.:x..xx:..........:x.. 65M2D184M1D35M1D83M1I56M 299/423 70.7% 424/94230402 0.0% 5/423 1.2% 55561442 NA +18320 chr4 + 190214555 93769181 93769180 93769459 279 TAACACATGCTTATGTTCTTTATCCC-AAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACCTGTACTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTGTCCTCTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGTACTTGAT chr4 + 94230402 38204903 38204902 38205182 38204903 38204902 38205182 280 TAATCCCTGACTTTTTGCTTTCTCCTTAAGGATTCTGGAGCTGCAACAGAATGGTGACATGGACATACTGAAGCATAAGTGGTGGCCAAAGAACGGTCAATGTGATTTTTACTCATCTGTGGATACCAAACAGAAAGGAGGTGCCCTGGACATAAAAAGCTTTGCAGGTGTTTTCTGCATTCTCGCCGCTGGGATTGTCCTATCTTGTTTCATTGCAATGTTGGAAACGTGGTGGAATAAAAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGTATTAGAT ...:x.x..x:.x.x.x....x...:-......:........x..:....................x........:..:........x.....:..:..:.....::.x.....:..x.....:..x..:...........:..............:...........x..:..:..:..:..x..:.....:........x..:..:.....x..x...:....:...........:..:.................................:.x... 26M1I253M 230/279 82.4% 280/94230402 0.0% 1/279 0.4% 55564278 NA +136879 chr4 + 190214555 93772036 93772035 93774594 2559 GTACTGATGAGAACCTTATTTTCTTTTTCTTCATCTCCAGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGACCCCTCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTATCCCAGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCCTGGGGCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAA-CAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCTTTGCAAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAAC---------------------------------------------------------------------GTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTTCCTCCCACCTTCTCCC--TCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACT--TTTTTTCATTACTCAACTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCT--GCTTTTCATATACTGTACATCAAGTATAGGAAATGT-GCACTGAGTATACTAAAAGTATATGC--AGGATTAATTTTACATAAAGGC-----CTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCTTTTTACAT-TCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCC-TTTAACTGTGGACCAAAGGCAACCCCTGCAGT------GTTTATAAAACAA---------------------------------------------------------------------------TTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAGACTACAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAAACTTTATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATA------------------TATGCACCTATATA---ATGTGTATATA--TATAAAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAGGGGTTCTTTTCAGTTAGAAAAGGCAGGTTGC-TTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTATTAAAGCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAACCTTGATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCAC-AACAGCACATAGAGCTCTAGAAGAGTTGAAACATAGATCATTGAAGGTTAA-AAATCCTCTTCCAAAGCAGCA-AGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCCCTTAAGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAA--AGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACTCCCTTTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGA---------------TGACAGCAAAAACAGTGCCTCTTTGTGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTT--GTTTGTAATCCTTAAA--TTAAAATGTGG-TAAGTAGGAAGCAAG-AACTTATTCTGTG----------------------TTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCAACCTATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCT-GGGGAGCATCTTGTATTGTCACTG--TTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAA-ACCATTTTGTTTCCAGGGTAACAAGTAACTAAGTGCATGCACAACTTG-TTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAA----ACAAAAAAA---------TCTTTACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAA-----CTGTTAACCATGTACAATATTTAAAATAGGCTTATTTTGATGTATCGCCTATTATACAAACACACAAAACA-TTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTGTCTAAATAATTTGTCTAATAAAAATGTTTTCTAAACTTGC-TCTCATACTATTGAAGTCTTA---ACTGTAAGATTT chr4 + 94230402 38209058 38209057 38211809 38209058 38209057 38211809 2752 GTGGTGGTGAGCGGTACATCTTGTTCTTCTCCTTCCCCAGGATGACAAGGAAATTGATCTGGAACACCTCCACAGGCGCGTGAACAGCCTCTGCACAGATGATGACAGTCCCCATAAACAGTTTTCCACATCGTCGATTGACTTGACCCCGCTGGACATTGACACTTTGCCCACCCGTCAAGCACTGGAGCAAATCAGTGACTTCAGAAACACTCACATCACCACAACAACCTTCATACCAGAACAGATCCAGACGCTGAGCCGCACGCTGTCTGCCAAAGCTGCTTCTGGCTTCTCCTTCGGCAGCGTACCCGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACCAAACGGAGGCTTTTTCAGAAGCCCCATCAAAACAATGTCATCTATCCCTTACCAACCAACTCCAACTCTGGGGCTGAACCTCGGCAGTGACCCAGACCGAGGCACCTCCATATGAGCATCAGACCGAATTTCTTCACTGTTTCTTTTCTAGGACTCCCTTTGCAAGGAGCGGCTGTAATGTTGTGGGACTAACATGGATGTAACCtttttcttttctttttttgtttttaaaatttgttgttgggttgtttttttttttttttcctttattttatttAAGAAAAGAATCAGGATTATTAGTAACAACTCCTCCTCTTCTCTGCTTTCTCAGTCTGGTCTCCTCTTTCCT------TTCTCTCTTTATTCTCTTTACTACTCGAG---------TCACTTATTCTTTCATTTATCACCACGT--------------------TAGGTTTTGGTTACTTCAGGCTTTTCATATAC------TTAAATATAGGAAACATGGTAGTGATTAATGCATAAGAAAACCCTGAGGATT-ACTTTACAGAAGGGCATTGGCTCCTCCTCCCCAACTGCCTTTTTTTT--ACTATACTTGCAATAACTTAAGTC-CTTTACATCTATTCTGCTGCGTGCGGTCAGCGCTCCACTGCTGT---GTGTCCTTTTAACTGTGGACCAAAGGCAAACTCTGCAGTTTAAAAGATGaaaaaaaaaaaagaaaaaaaggcaaaatggagaaaaaaaagaagaaaaaaaaaaagagagagagagaaagcaaaataaaTGAAGTTGAAAGACCATTCAGGCCCCATTATATGAGAATGCAATTTTGTAGGATTAC--AAAAGCCATTACTATGCCAGTAAAGACTACAGTTAAATCTACTTTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTGTTAAAAG-TTTTTCTTATGTACAGTAAACTGTATCATATGGCAGAAGCCTCTGTTGTGTTAAATAAATTAGTATCTCatacatatatatatatacatatatacacacaagtatgtatatatatatacatgtatatataGCTATAAAATGGCAGCCGTTGCTACTGCAATTCATTTAATAAAGCTTTAGT-----AAAATGTGTTGTATACAGGAAAGATGTACAGTGCAGGGG-TCTTTTCATTTAGAAAAGACGGGTCGCTTTTAATGTTATTCTGACTTGCATTGTTTGCCAACAGAGCATATTTTATACTTTT-TTATTAGAACATCCGGGACAATTTAAAGTTTGTACCTAGATGTAACTCATTCGATTAGGTTTTGCATTGGCTGTTGAGCATTCTATATGGCTAACCTTGATAATTTTACTTTCAATTAATTAGACAGACGGAACACTCTCTTAGGTATACCATGCTCGTGAGCAACTAATATAGCTCTAGAGAAGTTTAAACATAGATCA---AAGGTTAATAAATTATTTTCCAAATCAGTACGGCTGATCAATACGATAATGGTGTTAGTGGA---GCAAAAGCCCTTGAGAAATACTGATGTGGCCTT-AATTATAATCACATATTGCTCGAAGGAGAAAACAATATATGAACC------GGCGCTCATTTTAAC-CCTTTATATGTTAAGTTAGATTTAGAGGAGCTACATACTTTTTATATTAGTGCCAACTGTATAGAACAAGAGAAAGAAGAGCAGTGAGAGCAGAACCAGTGCCGGTTTTGGCACCAGCTTTTTAAAGTAACGCTGTTACCTGTTAGAAATGTAGGAAGAGCTTTCAATTTGTAATCCTTAAAGCTAAAGATGAGGCTAAGTAGAAAGCAAGCAGTTTATCCCGTGAGGTTTTTCGGTTTGGTTTTGTTTTTAATGCAGCCATACACTTATTTTAACCTAACTCATTCTTTGGCTAGGATTA--ATAGGAATCAACCTCTGCGATTTGCTTTAGGATAAATTAAAAGGTATATTCTTCAGACCTATTCTATTTTGATGCTAATTCTGTTCTGGGGGAGCATCTTGTACTGTCACTGTTTTTTGTACTAAATCTTCGAATATTGTCTACTGTGTAAGGCAGAACAAATTCTTATCGTGCAAAAGGCCATTTTGTTTCTGGGATAGCAAGCGTCTAAAAGCATGCACAACTTGCTTCTCCCTTGTAACATTCATGAACTCATCCACACCTCTGAGAAAAAAAAAGATAAAAAAAAATACAATTTCTTTCCAACAAGCTACGTAGGGACATACCAGATGTTGCAGTGATTTTAGCTATTAAAGAAGAAATCTGTTAACCATGTACGATATTTAAAATAGGCCTATTTTGATGTGTTGCCTATTATACAGATACACAAAACACTTTTTGGAGGCCTCAGTTACAAGTGGCAGAGCTTTCTGTGTATAATTTGTCTAAATAATTTGTCTAATAAAATTGTTTTCTAAACTCGTGTTTCCTCCTGCTTAAACGCTGGGCACTGTCAGATTT ..:x..:....x:x:x:..:..x..:....:.x..:.....................:.....:........:..:..:..:..:...:.x...........:.....:....................x.....:.....:........x....................x..x..x.......................:.....:........:..:..............:..x.....:...........x..x........:.....x..:..............:...x.:..:....:...:..:...................................x..:..:...........:..:..:..x.................:.....:...........x..:........x..:..x..:.:...:..............................:.-.:...:.................:......................::.......:........................---------------------------------------------------------------------:.....:....::....................:..:xx:.:..::..x.:x:..:xx:.:--........:....------..:.....:.x.:.:.:.:x..x.::.x:---------:....--..:.......xx...x.x:..--------------------....x.::x:...x.::--.............------.:..:.........::.-.:.x...x..xxx:.x...x.x.:x.--......-.:......x..:...-----...:..:x:xx..x:.x:..x......--.x..:.x............x....-:.......-.x.........:.x.:xx..::.............---......-......................x.:.......------.x.x.x....x..---------------------------------------------------------------------------..xx...............x...x.x..........................--...........x.........x...............x.....:...........................................:.......-......................x.....................:.....................:.....:.....:.....------------------....:.:x......---....:......--.......x.......:......:..........................-----x...x..:.............xx.....:..........-........x.........:.:...:..-..................:..................:x...............-......:.:.....:..:........x:.....x.................:..x.............x.:.:..x....x.x....x:.......................:.........xx:.:.:.:..x.:x..x....x.:x....::::.::-.:..:.xx...x.........::....x............---........-....:x.:.......x...:.-:.:::........:......:.:..x.x...---.::::.......:....x..:............-.....:x:...:x....:::.x..--....:.x..:...xx....------...x....x:.:...-..:..x.x.:..x....xx....:......:..::..:......:...........x.:.......x:.---------------...x....:..x.......xx...xx....x.x.:..........:.::.x....:..............:.x..:....--:...............--.x..:...x..-.......:.......-.::....:.:...----------------------....x.:...............:.....:............x...........:--..............x..:..............x....................x...:x....x.......................-...............:........--.................:..........................x..x........:.......-:............::..:..:....::x....:x..............-..:...................x.....::...x......xxxx...----.:.......---------.....x..........::....................................:..x:..-----...............:...............:...........:.:............:.:..........-...................::....:..............................................x.............:.:-.:..x.x..::.x..::x:.:---.....x...... 471M1I80M69I61M2I13M6D29M9D5M2I21M20D17M2I13M6D17M1I26M2I6M1D15M5I27M2D24M1D8M1I35M3D6M1I32M6I13M75I52M2D95M1D84M18I14M3I11M2I49M5D39M1D27M1I54M1D159M1I40M3D8M1I21M1I31M3D33M1D24M2I19M6D15M1D69M15I80M2I16M2I11M1I15M1I13M22I54M2D87M1I24M2I64M1I48M1I47M4I9M9I61M5I71M1I89M1I21M3I12M 2079/2485 83.7% 2752/94230402 0.0% 341/2485 13.7% 55562978 NA +3096 chr4 + 190214555 93783932 93783931 93784001 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 17750735 NA +13715 chr4 + 190214555 93794215 93794214 93794460 246 CGTCTGTGGAGTTTTATTTCCAGGGAGACAGGGCAGGATTTGCTGCTATGCAGACTGAATAATGTTTGAAGCCAACATCATGTCACATTTTGTGTGCACTTTCCAAAGATTAATCCAAGCGTTACAAATGGGACACAGACTGCCATTGTCCCAGGGACACTTTAATAACCCACACCTACAATATTCAACCTGTTGTTTGCATAGGGACAACTTTGGGACACAAAAACCCACCAGAACGACTTAGGG chr4 + 94230402 38215964 38215963 38216207 38215964 38215963 38216207 244 cggTTGCGGAGCCC-ATTTCCCGGGAGACGGGGCGGCCCGCGCTGCTATGCAGACGGGATAATGGCGGGGGCCAGCGCCGTGTCACCTCTTGTGTGCGCTTTCCAAAGAGGAGCCCAAGCGTGGCGAATGGGACACAGACCGCCATTGTGCCGGGGACACTTTAATAACCCACACCTACAATATCCAACCTGTTGTTCGCAGAGGGACGGCCCTGCCACGC-ACAACCCACCCGAGGGGCGCGGGG ..x:..:....:::-......x.......:....:.xx:x:..............x.:......x:x.::....:.::.:......x.:........:...........xx.::........x:.:..............:........x..:...............................:............:...x......::.::..xx..:.-.x........x..:x.:.x::... 14M1D206M1D24M 188/244 77.0% 244/94230402 0.0% 2/244 0.8% 55578251 NA +3784 chr4 + 190214555 93820200 93820199 93820274 75 TGATCTTGTCTGATCTCAGAAGCTAAGCAGGTTTGCGCCTGGTTAATACTTGAATGGGAGACA------GAAGACATAAGG chr4 + 94230402 2289836 2289835 2289916 2289836 2289835 2289916 81 TGACCTTCTCAGATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGAAGCATTCAAGGAAAACACAGGG ...:...x..x.......x.......x....x...x...x...:.:.:....:......::..------...:...:.:.. 63M6I12M 58/75 77.3% 81/94230402 0.0% 6/75 8.0% 91530364 NA +17631 chr4 + 190214555 93829413 93829412 93829998 586 GCAGCCAACGCCAGGGAGCGGCGCAGGATGCATGGGCTGAACCACGCCTTCGACCAGCTGCGCAATGTTATCCCGTCGTTCAACAACGACAAGAAGCTGTCCAAATATGAGACCCTGCAGATGGCCCAAATCTACATCAACGCCTTGTCCGAGCTGCTACAAACGCCCAGCGGAGGGGAACAGCCACCGCCGCCTCCAGCCTCCTGCAAAAGCGACCACCACCACCTTCGCACCGCGGCCTCCTATGAAGGGGGCGCGGGCAACGCGACCGCAGCTGGGGCTCAGCAGGCTTCCGGAGGGAGCCAGCGGCCGACCCCGCCCGGGAGTTGCCGGACTCGCTTCTCAGCCCCAGCTTCTGCGGGAGGGTACTCGGTGCAGCTGGACGCTCTGCACTTCTCGACTTTCGAGGACAGCGCCCTGACAGCGATGATGGCGCAAAAGAATTTGTCTCCTTCTCT-CCCCGGGAGCATCTTGCAGCCAGTGCAGGAGGAAAACAGCAAAACTTCGCCTCGGTCCCACAGAAGCGACGGGGAATTTTCCCCCCATTCCCATTACAGTGACTCGGATGAGGCAAGTTAGGAAGGTG chr4 + 94230402 38219695 38219694 38220202 38219695 38219694 38220202 508 GCGGCCAACGCGCAAAAGCAGCGGCGGATGCACGTGCTGAATCACGCCTTCGACCAGCTGCGTAATGTCATCCCCTCCTTCAACAACGACAAGAAGCTCTCCAAGTACGAGACGCTGCAGATGGCGCAAATCTACATCAGCGCCCTCGCCGAGCTGCTGCAcgggcc---------------gcccgcgcc-ccccgagccgcccgccAAGGC--------CGAGCTCCG---CGGGGCCCCCTTCGA----Gcctcccccgccgccccctcctccgccgccccgc--gcctc---------------gccccccgcgcccg------ccAGGACTCGCTTccccccggcggcggccgcgggcggTTTCGCGGCGCAGCTCGAGCCGCTGCGCTTCCCTTCTTTC------------------------CCGGCGCAGAAAGCGCCTTCTCCCGCGCTGCTCCTGGGGCCGCCCGC-GCCGCAGCAGCCCGAGAGGAGCAAAGCGTCGCCGCGCTCTCACCGCAGCGACGGGGAGTTCTCGCCGCGCTCCCACTACAGTGACTCGGACGAGGCCAGCTAGGGAGCTG ..:........xx:::...:...xx.......:.x......:....................:.....:.....x..x....................x.....:..:.....x...........x.............:....:.xx..........:..x:x...---------------...xx....-..:.x....x..:..x..:..--------.x.x..:..---..x....:...x:..----.x.x.xxx.:x...xx..x.xx.:.xx..:.x..--..:..---------------...xx..x......------x.x...........:.xx.xx.:..xx.:.....x..x.x.x...:......x..xx.x....:....:.xx.....------------------------x:......:..::xx::x.....:x.x..-.:..x..:..xx.::..-...:xx....xxx..:.:x......:.x.....x..x..:...x.x...........:..:..x..x.::.....:..............:.....x..:....:..x.. 167M15D9M1D21M8D9M3D15M4D34M2D5M15D14M6D77M24D29M1I17M1D110M 370/507 73.0% 508/94230402 0.0% 80/507 15.8% 55609718 NA +28001 chr4 + 190214555 93833249 93833248 93833707 459 CTTTTCTCTCCATTCTATTTCTTTCTTTCTTTTTTTATTGCTGGCATTTCTTTGAAAGAGATGTACAATCACATTTCCATTTTAAGGTTCTTCTATGGAGTTTGCATAACAAACGTTTGGCAGCTCGCTCTCTTACACTCCATTAACAAGCTGTAACATATAGCTGCAGGTTGCTATAATCTCATTAATATTTTGGAAACTTGAATATTGAGTATTTCTGAGTGCTCATTCCCCATATGCCAGACCACTTCTGCCATGCTGACTGGTTCCTTTCTCTCCATTATTAGCAATTAGCTTCTACCTTCCAAAGTCAGATCCAAGTATCCAAGATACTAGCAAAGGAATCAACTATGT-GTGCAAGTTAAGCATGCTTAATATCACCCAAACAAACAAAGAGGCAGCATTTCTTAAAGTAATGAAGATAGATAAATCGGGTTAGT-CCTTTGCGACACTGCTGGT chr4 + 94230402 38221528 38221527 38221978 38221528 38221527 38221978 451 cttttcttttcttttcttttcttttctttttttttT-TCCCTAACACATCTCTGAAAGAGATGCGCAG-CGCATTTCCATGTTGAGGTTCAGCCCCGGAGTTTGCATAACAACCGCTTGGCAGCCCCCTCTCCCTCCCCCCGTTAACAAGCTGGAACGTAGAGCTGCAGGTTGCTCTAATCTCATTAATATTTTGGAAAGTTGAATATTGAGCGTTTCGGAGCGCTCATTCCCCATATGCCGGGCCGCTCCCGCTATGCTGGCTGCTTCCTTTCTCTCCATTATTAGCAATTAGCTCCTACCTTCCAAAGTGGGATCCAAGTATCCAAGATACTAGCAAAGGCATCAACTCTGCGGTGCAAGCTAAGCACGCT--------CCCAAACAAACAAAGAGACAACATTTCTTTAAGTAATGAAGATGGATAAATCGCTTTATTGAGCTCGCGACAGTGTTTGT .......:.:.x..::x.......::..:.......-.:x..::..:x...:...........::..:-.:.........x..:......xx.:x:................x..:........:.x.....::x.x.:..:...........x...:..x..............x.......................x............::....x...:..................:.:..:..:.:..:......:...x..............................:..............x:.............................x.......x..:-.......:......:...--------.................:..:........x.............:.........xx...x.-xx:.:......x..:.x.. 36M1D31M1D285M1I18M8D60M1I19M 373/449 83.1% 451/94230402 0.0% 12/449 2.7% 55611721 NA +3607 chr4 + 190214555 93837178 93837177 93837259 82 ATGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......::.--....:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:...:. 13M2D67M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 17803980 NA +6666 chr4 + 190214555 93852816 93852815 93853002 187 TGATTAATTTCAATTTTTTTGCTTTACACACCCTGTCATAAACTTTTTTATTTACACTTTATTGTAACTG-ACTTCATGACATTTGCTCTTGCTTAATAATAATCGGTTAACAGCAAGGGCAGGTGTTCTCAAGGATGTGGCCCTTCCATGCAGTGAAATCTAAACAGTTTTAAAAATCATCATAAAA chr4 + 94230402 38227766 38227765 38227934 38227766 38227765 38227934 169 TGATTAATTTAAAATTTTTAGATTTACACACCCTGCAATAAAC--TTTTATTTACGTTTTATTGCAACTGAACTTTACGTCTTTTGTGCTTACCTAATATTAGTGTGGTAACTGCTGAGGCAGGTG-----AA------------TCAACAGAGGGAAGTCTAAACTGATTCAGTAATGGCCATAAAA ..........x..x.....x.x.............:x......--..........::.......:.....-....:.:.x.x....:x...:.:.....x..:.xx.x....x..x::........-----..------------..x.::x..x...:.......x.x..:.:x...x::....... 43M2D25M1I55M5D2M12D43M 128/168 76.2% 169/94230402 0.0% 20/168 11.9% 55625050 NA +3452 chr4 + 190214555 93878411 93878410 93878456 46 AACAAACAAACAAACAAACAAAAAGAAGCTTTAAGAGAAGAAAATT chr4 + 94230402 50122450 50122449 50122495 50122450 50122449 50122495 46 AACAAACAAACAAACAGACAAAAAGCAGCTTTAGAGAAAGAAAATT ................:........x.......::::......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 43755961 NA +7178 chr4 + 190214555 93885671 93885670 93885913 243 TCAATTATTTATTTAGTAAACAATAAAAAAAGTATAAAAGCAGCCAGGACTATATTAGCAAAAGATGGGGCAGTAGGA-AATAAAGACTTGGAAAATTTAAAAGAA---------CAAAAA----TGAATGTCATTCACAGCCATTACAGACTTCAGTA-----------AAAAAGTTAGTGAATTATTAATTAATGTCATTAAGTTAATTGTGCCAATGTTTGACAGCAGTGT--GAAATGAATCATGG----AAAGTTTTAGAA-----AAACAAAA chr4 + 94230402 38235445 38235444 38235721 38235445 38235444 38235721 277 TTAATTATTCATTTGGTAAACAATGAGGGA-GTGCAAAAGCAGTCAG-ACTAGGTAGGCAGAGGATTAGGTTGTACGATAATAGAGATAAGGGCAAATAAGGAAAAAATCCTTAGCAAATAATGCTGAATGTTATTCATAACTGTCACAAGCCTTCTTATACTGTAAAATAAAATAACAGTGAATTATTAATGGCTTTCATTAAGGTAATTGCACCTGTGTTTGACGACAGAGTTGGACATGACTCATAAAGCCAAAGTTTTGCGAAATGTAAACAAAA .:.......:....:.........:.:::.-..::........:...-....x:.x:...:.:...x:..:x...x..-....:...:xx..:x..x.x.::.:..---------....x.----.......:.....:.:.::.:...::.:.:xx..-----------....x:x:..............x:x.x........x......::..x:........::...x..--..x....x....::----........:x:.-----........ 30M1D16M1D30M1I27M9I6M4I34M11I64M2I14M4I12M5I8M 173/241 71.8% 277/94230402 0.0% 38/241 15.8% 55650226 NA +25485 chr4 + 190214555 93890440 93890439 93890916 477 TCTTTCTTTTTAGTTCTGAATCTACATAGCACAACCCAAATAGTTTTGAC-AGCAAGTATGCATTTCTTCCT-TTAGCGACAGTAGCTTTAGTATTAACTGAAAGGCAGGG----TGGATAATGTGACACGCGCTTTACTTTCAGCAGACTTGTTAATATCAGCTCTGAATTTTTCATGACGGCTTTGGTAACCTGTAGCCTGGAGTTGAAGCTCTGGGGGTTTCCACCACAAAGAGGTGGATCAGCTGAGCTCTCACTTCCCATCTGGCACTGGGTGACAGGGACAGTCAGGGGGACTGCAGGAAACCTGAAGAAGGAGAAAGCTGATGTGGGACACCCATTGTCGTGCATAAAAGGCTAAACATGTG-CTGTTGTGTGGATATATCTTTGAGACACTTGTTTATCACTGGCTTCAGAATATAGTTAGTCAATGTGTTTAACTTTATAGTCACAAGAACAGCTGCCGCTCGTGTAAGTAATAC chr4 + 94230402 38238615 38238614 38239075 38238615 38238614 38239075 461 TCTTTCTTCTCCTTTCTG--CTTGTATATCCCTAC---AAAAGTTTGCACCAACA-----GCATTTCTACCTCTTGGTGATGGCAG-TTCAGTGCTAGCGAAAAGGGAGGGGGGGTGGATAATGTGACACGCATTTTACTTTCAGCGAGCTTGTTA-TACCAGTTCTGAATTTTTCATGAAGGCTTCAGTAACCTGTAGCC-------GAAGCTCGGGGGGTTTCCACCACAAAGAGGTGGATCGGCTGAGCTCTCACTTCCCATCTGGCACCGGGTGACAGGGACAGTC--GGGGGCTGGAGGAAACCTGAAGAAGAAAAAAGTTCATGTGGGACATCCATTGTGATGCATGAAAAGCTAAACATGTGCCTGTTGTAGGGACATATCTTTGAAACACTTACTTATCTCTGGCTTCAGATTATATTTAGTCAGGGTGTTTTACTT--GAGTCACCGGCACAGCTGTCCTGTCTGTAAATAATAC ........:.:xx.....--::.::...x.x.x..---..x.....xx..-.:..-----........x...-..:.:..::.:..-..:...::..:.x:.....x....----.................::............:::.......-..:...:................x.....::.............-------.......x............................:...........................:.................--....:...x................:.:....:.x..........:.......x:.....:...:............-.......:x...:..........:......::.....x...........x....x.......:x......x....--x......x:.x.......:.x:x:x.....:...... 18M2D15M3D12M1I4M5D12M1I13M1D24M4I41M1D44M7D82M2D77M1I75M2D37M 379/454 83.5% 461/94230402 0.0% 30/454 6.6% 55651825 NA +19709 chr4 + 190214555 93907226 93907225 93907531 306 TACCTAACCATAGTTAGCATACGCTTTCTACA--CAGTTGGTAGCAATCAGATACATATTTAATGTGGTTTCATTATATCTTATAAATGCTGGCA-TAGAATAATCTCCCCAGGGTATTCAGTGAATAATAGAAAAGAGAAAATGATGAGCACATTTAGCACATGCACCCACAACCTCATGATAAAAGGCAGCATTCCCCCCATACAGCACCTGTTGTCATAGCTGGTTTAATTACTTTTCATTGTAGTCAGCTGCCTGAAATATTTATCATGGAGCCTATAATTTTCCAAATCCAAGACTGACAACTA chr4 + 94230402 38243234 38243233 38243541 38243234 38243233 38243541 308 TACATAGCCATAGTTGGGTTATTCTTTCTCTAAGCAGCTGTTAGCAGTCAGATACATATTTAATGGGGTTTCATTATATCCTATAAATGCTGGCACTGGAATACTTTCCCTGGGGCATTCTATGAATAAAAGAAAGGAGAAAATGACGAACGCACTTAGCACATGCATCCACAACTTCACGATAAAAGCCAGCATTTCCCC-ATACAACACCTGTTGTTGTAGCTGGGTTAATTACTTTTCATTGTAATCAACTGCCTGAAATATTTATCACAGTGCCTGTAATTTCCCAAATCTGAAAGCGACACCCA ...x..:........:.xx..:x......x:.--...:..x.....:..................x..............:..............-.:.....x.:....::...:....x:.......x.....:..........:..:.:..:............:.......:...:........x.......:....-.....:..........::.......x...................:...:...................::.x....:......:.......::.:.x:....x.:. 32M2I61M1I105M1D107M 254/305 83.3% 308/94230402 0.0% 4/305 1.3% 55663992 NA +3283 chr4 + 190214555 93913036 93913035 93913181 146 ATATATATAATTTATATATATTTATATATTTATATATATTATTTATATATTTATATATTATTTATATATATTATTTATATATATTTATATATTATTTATATATCTTATTTATAT--------ATATTTATATA---TTATTTATATATAATTTATAT chr4 + 94230402 27158669 27158668 27158814 27158669 27158668 27158814 146 ATGAATATAGTTTATACAGACTTATATAAGTATAGATATTTGTGATATATATAGGAAATATCTGTATATA-TATCTA-------TTGTACTTTCTTTA---GTTTCTTTCATGTTCAATAGGATGTCTACACATGCTTCTCTTTATATAAATTACAT ..:x.....:......:.x.:.......xx....x.....xx.x......x..x:x.x...:.:......-...:..-------..:..:x..x....---:.:.:x..:..:.--------..:.:..:.:.---..x.:.x.......x...:.. 70M1D6M7D14M3D13M8I11M3I21M 96/135 71.1% 146/94230402 0.0% 22/135 16.3% 66754367 NA +3029 chr4 + 190214555 93917277 93917276 93917338 62 TATTTCTTCCACTCCTCTTTCCTTTCATTTTTCTTTTCTTTTCTCTTCCTTTTCTTTCTCTT chr4 + 94230402 66962333 66962332 66962394 66962333 66962332 66962394 62 TGTTGATTTCACCACCTCTTTCATTCGTTCTTTTTATCATTTCTCCTCCTTTTCTTTCTTTT .:..xx..:...:x.:::..:.x...:..:..:..x..x......:.............:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 26954944 NA +3774 chr4 + 190214555 93950342 93950341 93950424 83 CATGGTGGTGCATACCTGTAATCCCAGCTACTTGGGAGGATGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........--.x....:.:...........::...x....x.xx.x...x.............:..x:xx:..:..:.. 12M2D69M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 17917145 NA +17338 chr4 + 190214555 93964343 93964342 93965014 672 CCTTTTTCTTCCTTTTTTTTTCTTCATTTCGGAT----CTTGAATGATGACTTCTCTGTGGTTCCTAAAAAGGTTTTTTAAAAAATTACTTCAAATCTTAGGTTATTGTGTAAAAAATCCTGATTGTA---TGTGAT-TGGCTCAACT--CTGCTATATTGACATCTGTGACTTTTGCTTTTGTAAAATATTGCATTTCAGCTAGTGTCACTGTA----------CACATCTTCCCAGCTGAAACCACGG-TTTATGTATTT-TTGAATCTGGACATAAACACGCAAAGA-CTTGGAGGCTTTGGGTATTGCCCTTTCAACAGC--CTGCTTCCATGACAACAAGGCCTATTAGAGAGAAGCAGCCCTGTCACCACAAATTTAGGTCCAAATAATTTTACAGAAAAGATAAAAAGGTATGTGGCAACTCTATCTTCCTCCATCTTTTACATGAAGTAATTTCTCAGAAATATGATCAGCATTTGAGA-AAGAAGTGATTAAAAATTAAAAGGCCCTGGGAGAGAGAAAAAGTCTATTCATATCAAGGATTTTGAAAGCTTAATGAAAGGTGAAAGAAAACATGATAGGACTGCAATCTTTGACATTTTT--GCACAGTGAACAATTGATCCAAAGAATCAA--TTGAAGATTTAAATCATCA---------TTAGAGACTCAAATG----TTCATCTTTAAGAGTTTGTACTTTG chr4 + 94230402 38254388 38254387 38255065 38254388 38254387 38255065 678 CTCTCTCCTTTTTTTTTTTTTTTTAATCTCCGAGGAGACCAGAACAGGGGATTGTTTGCTTCCACAAAGCATTTCTTTTAGAGAAG-----------------------AGAAACGCTCTTGCTTGTAGGCTGTGATGCAGTTCAGCTTTCTGCAGTATTAGTTTCCACTCCTTTTGTTTTT------CACTG----TCAGCGAGTGTTACTGTGTATACTACACCACATTTCCCCGTCTCTGACTAAGGATTCCTGTGCTGGCTGAGGGTGGAGATAATAGCAAAGAGGTCCTGGTGACCATGGGCCTTGTTCTTTACAAAACTCCCGCTCCCATGGTAACAAGGCCTATTAGGAAGTAGCAGCCTTGTCACCACAACGTTAAGTCCTAATCATTCACCCAAAAAGATAAAACGAAATGTGGCAACCTTATCTTGCTCAATCTTTTGCATAAAGTAATTTCTCAGAAACATGATCAGCGGTAGAGACAACAAGCGTTTAAAGGGGAGAGG---CTTTGAGAGGAGCAAACTCCATTCACATC-TGAGTTTTGAAAGATGAGCGAGAGATGGAAGAAAACATGATATTACAGCAATCTTTTTACTTCTTCAGCACAATGAACAATTGGCCTAAAGTTTCAGATTTTGAGATTTTTCTGATTAAGAGGCCAGCTGGAGATCTGAAAGTTGCTTCGTATCTGAAAATGTTTGCTTTG .::.:.:...::.........:..x..:..x..x----.:x...:::x.:x..x.:..:xx::x.x..:x.xx.:.....:.:..x-----------------------:x...x:x..:..x.....---......-::.:...:..--....x:....:::x..:::xx......:....------:.:..----.....x.....:.....:----------.....:.:...:x..xx:..:.x..-..:x...::.x-:...:xx....x....xx:.:x.:..:-.:...x.:.:x....:x...::....xx.x.:.--.:...:.....::...............::..x.......:...........xx...:....x...x...:xx.x:...........x.:x..........::......x...x.......:...:.................:.........:x.x....-..x...:.x.....::xx.:.:.---..xx.....:::x...x..:.....:...-x.::.........x.x.::..:..:..:..............xx..x.........xxxx..:..--.....:..........::.:....xx...:--..x:......xxx.x..:.---------:.:....::::..x.----...:.x.:.:.:.:.x.x.:..... 34M4I48M23D19M3I6M1I10M2I32M6D5M4D18M10I25M1I11M1I27M1I33M2I161M1I23M3D29M1D65M2I30M2I19M9I15M4I25M 435/635 68.5% 678/94230402 0.0% 80/635 12.6% 55709955 NA +3180 chr4 + 190214555 93968778 93968777 93968844 67 ACAAAATGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAGGAAAGG chr4 + 94230402 75248037 75248036 75248103 75248037 75248036 75248103 67 ACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagag .......:xxx:..::...................x.x.x............x.x.x.x..::.::. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 18720741 NA +3452 chr4 + 190214555 93968794 93968793 93968844 51 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAGGAAAGG chr4 + 94230402 75248049 75248048 75248099 75248049 75248048 75248099 51 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagag ..::...................x................x.x..::.::. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 18720745 NA +3700 chr4 + 190214555 93968796 93968795 93968844 49 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAGGAAAGG chr4 + 94230402 75248049 75248048 75248097 75248049 75248048 75248097 49 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagag ..::....................................x..::.::. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 18720747 NA +3102 chr4 + 190214555 93968798 93968797 93968833 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 81367494 NA +3520 chr4 + 190214555 93968798 93968797 93968844 47 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAGGAAAGG chr4 + 94230402 75248049 75248048 75248095 75248049 75248048 75248095 47 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagag ..::.................x...................::.::. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 18720749 NA +3393 chr4 + 190214555 93968800 93968799 93968838 39 CTCTCTCTCTCTCTCTCTCACACACACACACACACACAG chr4 + 94230402 12601304 12601303 12601342 12601304 12601303 12601342 39 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG .........................:..........x.. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 81367496 NA +3102 chr4 + 190214555 93968802 93968801 93968837 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 81367498 NA +3493 chr4 + 190214555 93975256 93975255 93975349 94 ATAAATTAACCATGCTTGGTGGTGCACACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCGCTTGAGCCCAGGAGGTGGAGGTTG chr4 + 94230402 76033183 76033182 76033274 76033183 76033182 76033274 92 ATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..:..xx:.:x..:.x::.........:--...:..:...........::........x:xx.x.:.x.:.....:.....:..x.xx:..:.. 28M2D64M 62/92 67.4% 92/94230402 0.0% 2/92 2.2% 17942073 NA +3108 chr4 + 190214555 93976432 93976431 93976515 84 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATACCAGAAACTGATGGCTGTTCCCTTC chr4 + 94230402 1495007 1495006 1495090 1495007 1495006 1495090 84 AAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTTTGGAGTGGGGTGGTTGTGTCCTTC ........x.:......x........:.:..:...:.....x....::.x:x:xx..:x:::..:xxx.:...:...x:..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 92481425 NA +3138 chr4 + 190214555 93976432 93976431 93976547 116 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATACCAGAAACTGATGGCTGTTCCCTTCCTCCAAAAGCCAA---GCTCTCTTCAGATTTTTCT chr4 + 94230402 51472491 51472490 51472596 51472491 51472490 51472596 106 AATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTT---------CAAAAACAAAATTGCTCTCT----ATTGTTCT ..x.x.x...::......:..x.....:.......x.:.:.......:x..:.:....:xx::...x...x:.xx...---------.....:.x..---.......----...x.... 78M9D10M3I7M4D8M 75/103 72.8% 106/94230402 0.0% 16/103 15.5% 42503941 NA +3130 chr4 + 190214555 93976433 93976432 93976515 83 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATA----TATACCAGAAACTGATGGCTGTTCCCTTC chr4 + 94230402 1495004 1495003 1495090 1495004 1495003 1495090 87 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTTTGGAGTGGGGTGGTTGTGTCCTTC .:.........x.:....x..........:.:..:...:.....x....::.x:----..:x:::..:xxx.:...:...x:..... 54M4I29M 57/83 68.7% 87/94230402 0.0% 4/83 4.8% 92481429 NA +3277 chr4 + 190214555 93976433 93976432 93976482 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:...............:.:..:...:.....x....::. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 92481427 NA +3439 chr4 + 190214555 93976434 93976433 93976509 76 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATACCAGAAACTGATGGCTGTT chr4 + 94230402 85548420 85548419 85548491 85548420 85548419 85548491 72 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT----CAGACATGGATATCCATT .............:.:x.....:...:.:.:.::...:..........x.....----....x.:x...:x.::.. 54M4D18M 54/72 75.0% 72/94230402 0.0% 4/72 5.6% 8428014 NA +28192 chr4 + 190214555 93979823 93979822 93981044 1222 TGTGAGAGAGAGCTGTTTTCTCTTATCA-TAAACATGACATGATGTAAGACATGAACAAGTGTGTACTTAAGTAAAATAGTTATTTCCTTAAGTTGACTCACCATGGCACCCTAGAGATTAGTACTG-TTACTGATTTCACAGGTCTCTTGTGCATGTGAATTTCCATGAGATTCTATTCAACTGGAGTAACTAAGAAGAAAGAACAATGTCCCTCTATACAAGGTGGGTTTTGCATTGTCCCACACATAGTCTGCTGATGGCCGTGGGATGGCAAAGTCATCTTCATTAGACGGAATTTAATAGTGAATCAAAGTTCTTGTGGAGAATAGACTGATCTAAACTTTAGCCTCCCTTGGGTCCTGCTGAAAGATTAGAGGGAAAGAGTAGGGCCTTAGTAACTTGAATGTATCAGATTGTTTTTCACTAATAGTT----CTCTTGTAAAACTCTGAAAAACACCCAGTTTAACCCTTT----AAAAATGGAGA-----------------GAGAGAAAGGGGTACGATGGGGGAGGGAAAACAACTCAGGTAGTATACCACGGGCATTGATTTCATTGATTTTTGAGATGTGCTGTTATCCCTGTAGCAA---------GTTTCACAGATTTGAGTACGTACGCATGACCAAAATTTGTTGATCACAAATAAAAC---AGTTTTCCTGCTACAAATAATCATCTATACC-AGCTGCCACCATGCTACAGCTTTCATAAAGAA------TTTATAAAATC---AAGTTACCTTTTAGTCTTGCTTTTGGTTTTGTTCTATGATGGGAGAGTCTAAAACTCAATCTAAGGATGCAGTCCTTTGATAAAATCTTCTCAAAAATATTAGGAA---------------TCTAGGA-----------------------AGAGTTAATGGCAGGAGAAAAC-GGAGGAGCAGCACAGGTAAAATGCATCAACCAG-ACCTGTACAGCAGGATCAGACATAGTTAACAAGAAAAAAGAAAGGAGAAACAAATG-TGTTAGGTGATCTTTAGTCTAAAGAAATCTCTGTTGGGCAACTGGGCATTTTGCTCCTTGCCTTTGATTTCCAACTTCCTTTCAAAGAATTCGTTAAGTGAAAAGAGAGATGATGGCAG-CTCAGTATATCAAAGCTCAGTTATCAGTTGGCTTATTCTAGTATCTTTAGTCTTTTGTGGATGCCTTATGATGTGTTGT------GTGGTAACACTG-------GAAAGTCAATCTTATACC--AGCGATTGCCACATAAACGTTAAGGAATCCAAAAAAA--AATCACAAAATAG----AAATTGTT chr4 + 94230402 38258272 38258271 38259486 38258272 38258271 38259486 1215 TGTGGGGGTG-GTTGTTGTCTTTCAGAACTCAATAGGAGATGACATAA-ATACAAACACCTATGCACT-AGGTAGGAC---------------TTGAGTTACCGTCACACCCTGGAGAGTAATACTGCTTGTGGGTTTTACATGTCGCCTGTGTACGGGAGTTTTCACGTGATGCTGCCCAAACAGAGCAACAAGGAGGAAGGAACAATGTCCCTCTATCCAAGGCTGGACCTGCATTGTTCTGCACATAGCCCGCTGATGAACGTGAGATGGCAAAGTCATCGTCATTAGACGGAATTTAATAGTGAATCAAAGTTGGAGGGGAGAATAGGCTGAGCTCAGCTTCAGCCTCCCTTGGGCCCTGCTGAAAGATTAGAGGGAAAGAGCAGGGCCTTGCAAAGTTGAATGTATCAGATTGTTTTTCAGTAATAGTTGTGCCTGTTCTAAGGCCCTGAGAACCACCCAGTTTAACTCTTTTTGGAAAAACGGGTACCACAGAGGCTGGGGAGGAGAGGAAAAAGAGCTGTGAAGAAGAGAAAGAA----AAGTGATGC----------TTGGTTTCATATATTTT---------------TTTCTGTAGAAAAAAAAAATCATTTCAGAGTT------------------CAGAAATTTCCTTTTTGTAAACGGAACTATGATTCTCCTCAAAGAACAAAACCACTATGCCTTATTGCAAATATGTGA------TCAAAAGGAGGCAAGCTCCAGGAAGGCCAAAAGTAGAATCTT--TTTTATTTTCAGCATACTTCCACCATCTGAAATCCT-------GACTTATGTA---AATGTTTTGATCTATTTTCTCCGTAGTTACTCAGAATGCTGCTGATCAGGTTGCAGGACAGCTGTTGCCGTTGGCAGTGACGGAGTTAACGCAGAGTGTGAATAGGGGGAGTAACCCTCTGAACGCTCACCTACCAGCACCTGCAGGCTGGGATCAGGCACAGCTAACAATAAGACATCA---------AAATGCCGTTAGATGATCTTCCTT-----GCTGTCCCCACAGTGTCACTGGGCA-------CACTGCCTCTGGTTTCCAGCCTCCTTTC-------------AGTGGGAAGTCAGATGATGGTAGCCCCCACGTATCAGTGCCTGGTGATCAGCTGGATTGTCCCAGCAGCTTTACTCTTTTGTTCCTGCCTTGGGACGTGTTATGTAGCAGTGATAACATCGCTGCAAAGAAAGGTAAACATTGACCAGAGAGATCTCCACATAGA--TTGGGAAGTAAAAAAACACCAACAACAAAATAGGCAAAAATAGTT ....:.:.x.-.:....x...:.:.xx.-.x..:.x..x....::...-.:.::....xx.:..:...-.:...::.:---------------....x.:...:.x:......:....x..:.....-..::x.:...:...x...x.:....:.:.x..:...:..:.x...x..:::...x::...:...x.:..:...:.................x.....:x..x::........:.::.......:.:.......:x....:...............x.................................xxx.x.........:....x..x.:...:.............:..........................:........:xx..x........................x........----..x..x...::.:....:..x.............:....----.....:..:x.-----------------.....:..:::.x:.x:..::.:..:....:x.----.:..::.::----------...:......xx.....---------------.::......x..---------:.....x..x.------------------.x:......x:.xx.:::...:::...---::..:....xxx.x..xx..x.xx....:..-x::...x.x:...:x.------...x..:..:------.::.x:..:x.---....x:xx.:..--.:..::...::.:x.xx...:.:x..xx..:.x:..-------:.::..x.x.---.:.x:......xx.x.:.:::.:x.:x..:.x:...---------------.x:....-----------------------:.......:.xx::.x.x:..:-..:....:.:.x.xxxx..x::x..:.x.....-.....:.x:x::.......:..:..:......x..:.x.xx.---------.....-:.....:.......:xx.-----.xx:..:.:::x.x.:x........-------.x:.....:..:......:.:.......-------------....::...xx.........:..-.:.x:::.....:x..:::..x.....:...x..:.:.:..:.x.....x........xxx......:x..:.....:.------...:.....::.-------.....x:..x.x.xx...--..x...:x.......:.--..::.:.:.xx.....x.--..:x.........----....x... 10M1D17M1I19M1D19M1D9M15D34M1I306M4I39M4I11M17I33M4D9M10D17M15D12M9I11M18D27M3I31M1I16M6D10M6I11M3I12M2D36M7D10M3D36M15I7M23I22M1I33M1I42M9D5M1I18M5D25M7D28M13D23M1I79M6I12M7I18M2I17M2D18M2I13M4I8M 770/1103 69.8% 1215/94230402 0.0% 231/1103 20.9% 55721551 NA +3157 chr4 + 190214555 93984855 93984854 93984932 78 GAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA chr4 + 94230402 70338957 70338956 70339034 70338957 70338956 70339034 78 GAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAGCAA ...:.:....:...........x:.:.:..:.:...:..::..x:..::..:x..x:..:x..:::..:x...:.x.. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 23645898 NA +23871 chr4 + 190214555 93994649 93994648 93995117 469 CTTTCAGTTTCAGAACAAAGAATAAAAATATAAAAAGGTAAAAATGAAAATGTGTGCTATTCTGCTGCAATGTAACT-GAGAGTTATAAAGGCCCTGTGAACAATATTGAGTTTGCAGTAGCACAATCATATCACGAAAGATTTACCTTCACTCTGCAAACTCAATATAGGGCAATAACAGTCTATTACAAGCTGAGCAATACAACATCAAAGGAATGTTTAAAAGAACTAGACAGAACCTTTAAATCAACACAATTGAGTTATCTTCCCCCAAAGGAAGCACCAT-GAGAGAGCTCATAGCAGGATTTTTCAAGAGGTATTACTAATTTACCATAAGTTATATTTAATACACTTTTAAAATGTAGTTTGTAATCTCTCTTTACTTTTTAGAACACAGAGCAATAAATTAAAAGAGAAACAATCCCCAAAGAGCAAGAGACTGGGAGGAACAAAAATGACAATAGTTTTAT chr4 + 94230402 38262779 38262778 38263242 38262779 38262778 38263242 464 CTTAGAGTTTCAGAACACAGAATAAAAATCTAAAAGAGTAAAAATGAAAATTTGTCCCGCT-TGTTGCAGTGAAACCAGAGAGTTATAAAGGATCTCTGAACAATATTGAGTTTGGGGTAGCACAATCGCATCACAAAAGATTTACCTTCACTCTGCAAACTCAATACAGGGCAATAACAACCTATTACAAGCAGAGCAATACAACGTCAAAGGAATATTTAAAAGAACTAGACAGAACCTTTAAATCACCAAAATTGTGTTAGGTTCTCCCAAAGGAAATACCCTAGGGACAATTCCTAGCAGGA-TTTTCAAGAGGTGGTGTTCATTTACCAAAAGTTGTATTTATTGCATATCTTATGCATAGCCTGCAATCTTGCCT--CTTCTAAAAACACAGAGGTCTGCAAACAAAAAGCACCTGTTCTCCAGG---GATAGTTAGGGCGGCAAAATGATAACAATTGCTGTGT ...xx............x...........x.....::..............x...x.:::.-..:....:..x...:-..............x:..x..................x:...........::.....:...............................:............::...........x............:..........:...............................x..x.....x....xx...:..........::...x.-.:..x.::..x........-............:x.::.x........x.....:......x.:..:x.:.x.x:::...::..:.....:x.:.--...:.x.:.........xxx.:x.xxx...:..x.x.x:.:.:.x.:.---:.x..x:x...x..x.x..x:..:.....x.:.x.:. 61M1D15M1I208M1I19M1D74M2D48M3D37M 361/462 78.1% 464/94230402 0.0% 9/462 1.9% 55731870 NA +3087 chr4 + 190214555 94000298 94000297 94000353 56 AAGGAAGAGAGGGAAGGGAGGGGAGGGGAGAAAAGAAAAGAAGAGAGAAGAGAAAA chr4 + 94230402 59767331 59767330 59767386 59767331 59767330 59767386 56 AATGAGGAGTGGGGGGGGGGGGGGGATGAGAAAAGAAAAGAAAAAAGAAATAAAGA ..x..:...x...::...:....:.:x...............:.:....:x:..:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 34232967 NA +31821 chr4 + 190214555 94006649 94006648 94007442 794 AAGAGAGACAAAAAAATGAGCCAATGAGAA-AGTAAATTAGATAAAAAAAAAATAAATGAATCTGGGTAAATAAACAGTATAGTATAAAGATAATATTTGAACTATACTTATTCTTGCAACTT-----------TTCTGAAATTTTTTTTAAAGCAGCTCTGC---------------TGAAGCAGTATGTACAAGAAGAAAACATCATTAC-TGTTTCCCACTGGCACACT--CTCCAGCATGTAATGAAGTATGCCTAAATCCATCCTGCAGAAAACTGGGAATTATT---GTGTGCCTACATTTCAGGTGAATTTGATTCCGAATAATGTAGTAGGCAGCCTTGGTAGTTAACTAAACTGCCTTCAAATCAAAGGCAATGTAGTACAGGTCATGGGATTGGGTTAACTGTAAAAAGCCTTGTTCTTAAGTCCCTAGGTGATACCTGACACACTCAAGCACTAACTTTGTAGGCTTGAGTACAGAAGATAAGTGAAAAGTCACACAGTGGTTCCTTTGCATTTGGCCCAGCAGCCAAGTTTAAAAGGACAAACAGGCTGTACTGCATAGAAGGTGAAATGCTTAAATGTCAGAGCAGCATTGTTAGGA-GCTATCTATATGCATAGCAACTATCATGTGTTCCAAAAAAAAAAAAAAACAGAGAGTACATTTCATGAAGGGAAATAAGAATAAAAGA-CTGTATCCTGCTTTACCATTCCCAAAAGACCC--AGGAAAATCTTTTAACAATTTAAATGTTGTTGACTTTATTGACCTATGTATTGTGTTCCTCTCAAAACCAAGGGAAAATATACAAAGTGTTTACATA chr4 + 94230402 38263763 38263762 38264557 38263763 38263762 38264557 795 AAGGGGGATACAAAATT----CAATGTGAATAGAGGATTAG-TGAAACAGAAGCAAGTGA-----------TAAGTAATCTAATATCTAAAGCACTTTT--ACTATGGATGCTCTAGCTTCTGCATAGACAAGGTACTGATACTTT----AAAAGTGCTCAGCGAAGGAAACCAGATTTGAGAAGGTAAGCACAATAA-CAACCATCTCAACCTGTGTCTCAGTGGTACATTTGCTCTAAAGCGTAAC--AGTATGTACAGAGCCATTAGGAGGCAAAATAGGAATTTTTTTTGTATGCCCCCATTTCAGGAGAATTGGATTCCAATTAATGGAAGGGGCAGCTTTCGCAGTTAACTAAACTGCCTTTAAATCAAAGGTAATTCAGAGCAGGTCACGGGATTGGGTTAACTGCAGAAAGCCTCTTGCTTAAATCCCCAGGTGATATCCGACACACTTGAGCATTAACTTTTGAGATGGGAGCACAGACAATAAGTTCCAAGTCACACAGTGGTTTCTTTGCATTTGGCCCAAGAACCATGCTTAAAAATACAAACAGGCTGTACTGCACAGAGGGCGAAATGCTTAAATGTCAGAATAGTATTGTTAAAACCCTATCTGTATGCATAGCAACTATCGTGTGTACTGCAGAGAAA---------AGGGCTTGTTTCGTGAAGGCAAGCAGGAATAAAAGGCCCGTATCCTGTTTTACCATTCCCAGGTGGCTTTGAAAAAAATTCTTTTGCAATTAAAATGTTATTGACCTCAGTGACATATGTATCGTGT--CTCTCAAAACCAACAGTAAATATACAAAATGTTTGTGTA ...:.:..:.x....x.----.....x...-..x::.....-.:...x.:..::..:...-----------...::.:.x..:...xx.:.xx.:x...--.....:xx.::...x..xx..x-----------.x....x.:...----...:xx....x..---------------...::x:...x.:....x..-x..x....x:x..-...x..:..x...:...:.--...:.:x::....:--......:x:.:.x....:xx.x:.x...x.:......x..---..:....:x.........x.....x......:.x.....x.:x:......:..x.:..................:..........:...x:..x:.......:................:.:.......:x.x.....:....:........:.:........::....:.......xx..::xx...:.....x:......xxx................:................:x.:...x.:......:x...................:...:..:...................::..:.......::.-x......:.................:.....x.::x.:.:...---------..:.:x::....:......x..::.:.........:-.:........:.............::x.:.::--.::.....::...x:.....x.......:.....:.:.x....x.......:....--.............x:.x...........:.....:::.. 17M4D9M1I10M1D18M11D28M2D22M11I12M4D13M15I20M1D13M1I19M2I14M2D40M3I317M1I43M9D36M1I32M2I56M2D39M 569/758 75.1% 795/94230402 0.0% 73/758 9.6% 55742886 NA +28734 chr4 + 190214555 94010942 94010941 94011663 722 TAAAGGCTGTG---------AAGTAAAACTTAA----CCAAAAAGAATTAGAGAAATATTTATTCATCACA---AAGTGTTCTTAGTATTTGGCTTTTC-CTTCTTGGGTGCAAA--GTTTTCTTCTCCAATTTTTTAGCTAATTACTACCTGCTCCTTGTTCAC-TGGAGGACTGAAAATACAGCTACTTCCACGGATCTCTGACATCCAGGTAGACATCTTGGGAACACTGATGAAACTGATAACAGGCCATTTTATAGGGCCCTAAAAGCTACTCAAGAAACTAACAAGGTCCATTAGACTTTCTGTCATGCATATGATGGGAAAAAATATACCACCATAAGATCCACTCAATTGTCCTGCTGCGACAGCAGTAGCTATTGTGTGTGAGAGGTTTTTGGAAGGTGGCTCCACCTTGGTGTTTATGCTCTGCTGGCTAGTGGGAGTTTCA-GGTAAGCCACCATAACAGAAGGGGCTTTGTGATAGGCTATCAGTGACAAACAGGAACGACAACATGCAGCCCAGGGGTTTGACAAGGAGGAGAAGCTCAACAAAGGAAGAATGACCTGCTTCAGTTTCCCATTTCAGTC--TAACATTTACTTTCTCACACAAAGCTTAGCTTGGTGTGTTGGTGTCCAAATCACATTCAAACCTTG-TACAGAGTGACAGGAGTCAAGCTGAGATACTTTAAGTGGATTTCTTTTCTTTCTACCTTGCTTTGAACTTCTTTTAAACCTACAG chr4 + 94230402 38267189 38267188 38267928 38267189 38267188 38267928 740 TAAAAGGTGTGTTAAAAAAAAAAAAAAACTTGGGACTTCAGAGAGCATTAGGTGGGTAGGAGTTCCCCACCCATAAATTCTCATAGAGCTTTCATTTTCACTTCTGTGATGCTAATAGTTTCCCTTTCTAATTTCTCAGCTAATTAGCTTATCTCTCCTGTGCAGGTTTGGGAATGAAAACATAGCTCCTGCTGGAGCTCTCTGATGTTCAGGCAGACATCTTGAGAACACAGATCGAACTGATAGCAGGCTATTTTATAGGGCCTTAAAAGCCAC-CAAGAAACTAGCAAGGCCCATTAAACTTTCTGTCATGCATATGATGAGAAAAA-TATACCAGCATAAAATCCACTTTATTGTCCTACTGTGACAGCAGCAGCTATTGTGC-CGGGGAGCTTTTGGACGGTAGCTCCACCTCAGTGTTTCTGCTCTGCTGGCTGGTGG-AGTTTCACAGAAGGGTACCCAGACAGAGGGGGCTTTGTGGTAGGCTCCTGGTGACCCATAAGAATTACAACACACAGCCTGGTGGTTTGACAAGGAGGAAAAGCTCAATAAAAGTGGAGTGACCTCTTTCAGTTTCCTGTTTCAAGCCTTGCTGTTTGCTTCCTCGCACACAGATTTGTTTGAAGAGGTGGTTGCATTGCTGTATTCAAGGCTTGTTTCATTGTGAGTTGTGTTTAGTTGGCTTTTCTTAGGGATGTTTCTCTTC--TCCATTTTCCTCTATGATATCTTTAAGCTGACAG ....:.x....---------..:x.......::----:..:.:..x.....:x:::..xxx:...x:...x---..:.x:..x...x::..xxx.....-.....xx.:...x..--....:.:.:..:.....:.:.........x:x:x.x:::.:...x..x-.xx:...x......:.:....x..x.::x:.x.......::.:....:..........:......x...x:........:.....:.............:.......:..-..........:.....:......:......................:......-.......x.....:.......:x........:...:........:..........:-:.:.::.:.......x...:.........::......x.............:....-.......-:.x.:.x:...xx:.....:...........:......x:::.....xx.:.:...:x......::.....::.x................:........:...:.x:..:......x:..........::.....:x.--.:x::...:...:...:....x..x..x.:...:x.x.x....xx.xxx:::::......:x....-.x..xx....xxx.x..:x..:..:xx.x::...:.x:x:.....:...--..:.::..x..:.:x:x.x::.....:.:x.... 11M9I13M4I34M3I25M1I15M2I48M1I110M1D53M1D56M1D56M1D7M1I139M2I66M1I49M2D34M 513/716 71.6% 740/94230402 0.0% 30/716 4.2% 55743753 NA +3212 chr4 + 190214555 94031405 94031404 94031478 74 ATATTTTATAT----ATACACACATACACATACACACACATATAAATATACACATGCATATATGTATACATATATATA chr4 + 94230402 74526049 74526048 74526126 74526049 74526048 74526126 78 ATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA .....x..x..----.x....xx.x.:x..:.........:..:..:.......x::.....:.....:..:...x.. 11M4I63M 55/74 74.3% 78/94230402 0.0% 4/74 5.4% 19505356 NA +3011 chr4 + 190214555 94031410 94031409 94031459 50 TTATATATACACACATACACATACACACACATATAAATATACACATGCAT chr4 + 94230402 89823931 89823930 89823980 89823931 89823930 89823980 50 TTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ........:x.:...:.....:........x.....x....:.:.:.:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 4207479 NA +3045 chr4 + 190214555 94031669 94031668 94031738 70 AACCTGGGCAACATGGCAAAACCTCGTCTCTACTAAAAAAAAAAAAAAAAAAAAAAAAAATACAAAGATT chr4 + 94230402 58251539 58251538 58251608 58251539 58251538 58251608 70 AATCCAGAAAACAGAGTAGAAACCTCTTTTAACTGAAAAAAAAAAAAAAAAAAAGTACAATAGAGAGATT ..:.::.:x....x:.:.:..x.::x.:.:x...:...................:x.x....x.:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 35780130 NA +3140 chr4 + 190214555 94057645 94057644 94057767 123 TCTCTCTCTCTCACTCCTTTCCTCCCCTCCTTCTTTTTTCTTTCTCTTTCTTTC---TGGAA------------TTTTAATTATAACTACCTCATCTCATTGTTTACTTATCACATAGTAAACTTTTTATTCCTTGGC chr4 + 94230402 84542759 84542758 84542894 84542759 84542758 84542894 136 TTTCTCTTTCTCACTCCCTTCCTCTGCTCCTCCTTTTTCCTGTTCCTTAGCAGCAGGTGGAAGAAAATAGCTTGTTTAGATTATAGCCCACTCACCTT-TTGTGTACAGATTG-ATCATACCTTTTCTCTCCCTCAGC .:.....:.........:......:x.....:......:..x.::...xx:xx.---.....------------...x:......:.:xx....:..:-....x...xx..::-..x:..xx:...:.x.:...::.. 54M3I5M12I24M1D14M1D24M 83/121 68.6% 136/94230402 0.0% 17/121 14.0% 9514886 NA +47446 chr4 + 190214555 94061799 94061798 94062600 802 TAATAAAAATGATGAAAAGAATGATAATCATAAACATGTGAACTTCTTGCCAGAAAACT---GGAAATAAAAATCCAATGGGACTTCTTCATACACTAGTATTTGTACTCATACAGCAAGGTTTAATAGAATTTTTTTATTTTAGGGTAGAAGATATGTCAAAT-CAGTTTACATTTCTCAGCCAGTAATTATATTTTCTTACAAGTGGCTATTACA-----TTTTTAGAGACAGACACAACAAATAATAAGAGGTTTTATTTGAAAGGAGAAACAAGCATGTGGGGTTTTTTTAGATGAAAGGGGTATAATAAATTTATGAGACCTCACATACAGCCATAATATAATAAATTAGAAGGATTAATAGAATTGTGAGCTACAGTAACCTGCACTAGTAGAATGCCTATTTTATGGAGCTCGATAATACAGTTTATCATTGACTCCACGG-AATTCCCACAATATATTAGCTGTGGTGTAACAATAAAGTACACACAGTAAGGGGCATGTCCCTTTTGACACACATTCTCTTCCCACACTTATTTTACCAGGGAAACAACTCCAGTGCAGTTTAATTAAACTGCAGTGCAATGAATTAGTCCAGGTCTTAGCCCTCTGACAGAGAAGGGCCTGGCAGTACCACAGGGGTTTGTCCCCTTGTGACACCGAAGAAACATCAGAAAACCTGGGAAAAAAAAAGTGTAGGTTCCCTCAAATGACAGTGTCACTGGGCAAGCCTAGAGCTGTCAATCAGGTCATCT-AAGGAAGCACTAACCCCTTTGGAGT---TTTTACATTTTGCCATTTGTTGACTGTG chr4 + 94230402 38276935 38276934 38277736 38276935 38276934 38277736 802 TAAAAAACCTTATAAAGATATCTATATAAATAAAA--GAGAATTCAATGCCCTAAAACCAAAGCAAATAAAAATTCAATGGG---CCTTCATATACTGGTGTTTGTACTCAGAGAGCAAGGTTTAATAAAATTCTTTAATTTTATGGCAGAAGACATGTCAAGTGCAGTTTAGATTTCTCAGACAATAATCATATTTTCTTGCAAGTGGCTGATACACTTATTTTTTCAAGACAGACACAACAAATAATAAGGGTTTATAGTTGAGAAGAGAAACAAGCATTT-----TTATCAACATGAAAGGGGCATCATAAATTTATGAGACCTCACATACAGCTATAATACAATAAATTAGGAGGATTAATGTAATTGTAGGCTACAGTAACCCTCACTAGTAGAATGCCTATTTTATGGAGCTTGATAATATAGTTTATCACCGCCTCCATGGGAATTCCCACAATATATTAGCTGTGGTGTAACAATAAAGCACACACAGTAAGAGGCATGTCTCTTTTGACACACATTCTCTTCCCACACTTATTTTACCAGGGAAACAACTCCGGTGCAGTTTAATTAAACTGCACTGCAATGAATTAGTCCAGGTCTTAGCCCCCTAACAGTGAGGAGCCTGGCATTACCCCAGGGGGCTGTCCCCCTGTGACATC--AGAGACTGCGGAGAACCTGGG--AAAAAAAGTGCAGGGTCTCTCAAGTGACACTGTCACTGTGCAAGGCCTTAGCTGTCAATCACAGGATCTGAAAAAAGCTCAGACCACTTTGCATTAAACTTTATCTGCCTACACTTGTTCACTTTG ...x...xx.x..:..:.x.x:x...xxx.....x--.x...:.:xx....xx.....:---.x..........:.......---:.......:...:..:..........x.x..............:....:...x......x..:......:.......:.-.......x.........x..:....:..........:.........:x....-----.....x:.......................:.x..x..x....:.:.............x.-----..x.:x.x..........:..x...........................:......:..........:.........:x......::............:x.............................:.......:.........::.x.....:..-......................................:............:........:...................................................:.....................x............................:..:....x..:.:........x....x......x:.......:.......:.--...:..xx.:..:........--..........:...x..:.....:.....x........x.....x.:xx............x:xx....-..::....x.x:...x.....x.x.---:....:x.x::xx..:.....x...x.. 35M2D22M3I20M3D79M1I52M5I61M5D160M1I216M2D21M2D69M1I25M3I28M 660/788 83.8% 802/94230402 0.0% 28/788 3.6% 55784864 NA +18611 chr4 + 190214555 94062761 94062760 94063508 748 TAATAACTTGAAATAAACTTAGGATGGTGATGAGTTCAAACAATCTCTATTGGAAAGAACATAAAAATAAAAACATTTTGTTCAAAATAAAAATTATCCAGCTAAACATGGTCTAGAATATCCAACATGGAAGTGTATTACAGAAGAAATGTTATTTCCCCAGAGTTTC-TGATCAACAATGCAGTAAGGTGATATCCCCACCCCACAATGACACAGAAAAT---CTTGCATTATTGATGAATATTCTTATTTTATCTGAATGCTGTTTATTAATTCATGAGAGTGTTTTGG------AATTGAAAAATAAAAATTTACAAAACAATTACATTTTTAATAACTGCTTCTAGCC---------TTCATACATTGA---ATACTTAAGTGAACCAATACACAAAGACCTCAAAAGAATTTATTAGACAATGGCAATTAGATCTCTAATAACTCGGCTCCGCTGGAATTACTGAGCCCCATTTAAATGCCAGACATGGCACCTTAGTGATGGGTACACCATGTCGCCACCCTGCCTTTGGCTGGGGACCCTGAGAAATGACAGTCCCATTAGGTGTTGTGTAAACCAGCTGACCTCACACTCTCAGTACTTGATCTTTGCACTGCAAGTGACCATTTGTCCCTGTTGCCCAGAGATGGAACTCAGGTGATTCAGTGTAACCATTGCCTTTT------CAAAAGGA-TAGAATAATCATTATAATTT-TCTTCCTAGCGCAG-----------ATGTAAATTTGCTTAGAAAAAAATGGATAGGCAAATTAAT chr4 + 94230402 38278381 38278380 38279122 38278381 38278380 38279122 742 TAGTATACTGAAACTATCCTAAGGTGAT-----------ATACTCTTCAAGGAAAAGAAATTGATAATGATTTTTTTTTTTCCAAATTGAA--TTGTCTAATTCT-CATGATCTTGGAG---------GGGAGTTTAATACAGAC--AACAGTATTTCCCTAGAGACAAATGTTGGAACATATAGAAAGGTAAT-------TCCCAATAAAACATAAAAAATAATCATACATTATTTATAGATATGCCTGTAT------AGAACTTCTTATTAATCCATAAGAGTGTTTAGGGGTAGGAAATGATAACTTAATCTTTTCTAAA----TGCATTTTTAGTGAGAGTTCCTTGCCAGATCAAGCTTAACGTGTTGTTTTGTTTTTTTTTGAACATACACACCATG-CTACAGAGGAATTCATTAGACAATGGCAATTAGATCTCTAATCATTGGGCACTGCTGGAATTACTGCACTGTGTTTAAATGCCAGACATAGTACCTTAGTGACTGGCTTATCCTGTCTCCACATTTCCATCGGCTACCAAGCCTGAGAAATGACAGTTGCATTAGATGTCATGTAAAGCATCTGACCTTGCTCTCCTAGCTCTTGATCTTCGCACTTCAGGCAGACATTTATCATTGTCCGACAGAGACAGAATTCAGGTGGTTCAGATTCACTACTGGTTTTCATGTTATAAAGGGATTACAATGGTCCATTCACTTTATCTTTCTATTGCAGGAGATATGGAAATACAATTTTGCT----ACTAGCTGGCCAGGTGAATTTAT ..:..xx:.....:x.x.:..:.:..:.-----------.:.x...::.xx.:......xx.:.x...:.xxx:x....x.:....x.:..--..:..:.::.xx-....:...x.:.x---------..:...x..x......x--..::x........:....x:xx-..x.x:.xx..::..x.....:..-------:....xx.x:...:.:.....---.x.:.......x..::....x.:.:.x.------.:x:..x:........:...:.........x..------..x...x..x.x..xx...x.x...----.:........:.:.xx.:.:..x...---------..x.::::...x---:.x:..xxx.....xx.:....x.x.-.:x..:.:.....:............................x.:.x...x.:.............x:.:x::................:.:..........:x..:x:.:.x....x....x:.x..x.:....:xx:.x................:x......:...::......x..x.......::.x...::..:x.........:.....x..:.:::x.....:..x:...:xxx......::...:.......:.....xx.x..:.:..x:...:------:...:...-..x...::..xx.x:.x...-....:...x:....-----------..::..x......----.xx.:x...x:...::....x.. 28M11D52M2D12M1D13M9D17M2D22M1I24M7D21M3I28M6D33M6I25M4D26M9I12M3I26M1D284M6I8M1I20M1I14M11I13M4D23M 480/701 68.5% 742/94230402 0.0% 88/701 12.6% 55784380 NA +3339 chr4 + 190214555 94072231 94072230 94072315 85 AAAAAAAAACAAACAAAAAAAAACAAATAAAAATTAAAAAGAAAATAAAAAATAAAAGTATAGATGGCCTCTCTCTCTTTTGTTG chr4 + 94230402 38816111 38816110 38816188 38816111 38816110 38816188 78 AAAACAAAACAAACAAAAAAAACCCCATAAAACTCAAAAAGAAAACATAAGGGAGACCTTT-------CTATCTTTCTTATGTTG ....x.................x.xx......x.:..........:.x..::x.:.xx.x.-------..x...:....x..... 61M7D17M 60/78 76.9% 78/94230402 0.0% 7/78 9.0% 55256120 NA +3067 chr4 + 190214555 94084582 94084581 94084640 59 AGTCACCTCTTGAATGTTTTTGTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTTTTTT chr4 + 94230402 82969122 82969121 82969179 82969122 82969121 82969179 58 AGTCATCCCA-GAAGCCTTTTGTTTGTTTGTTTGTTTTTGTTTTCTGTTTCCTTTTTTT .....:.:.x-...xx:...........................x.x..x::....... 10M1D48M 47/58 81.0% 58/94230402 0.0% 1/58 1.7% 11115460 NA +3085 chr4 + 190214555 94084595 94084594 94084639 45 ATGTTTTTGTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTTTTT chr4 + 94230402 14858191 14858190 14858235 14858191 14858190 14858235 45 ATTTTTTTGCTTGTATGTTTGTTCTTGTGTTGTTTTGGTTTTTTT ..x......:....x........:....x........x....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 79226404 NA +3007 chr4 + 190214555 94084616 94084615 94084653 38 TTTTTGTTTTGTTTTGTTTTTTTTTTGTGTGTGTGTGA chr4 + 94230402 25187724 25187723 25187761 25187724 25187723 25187761 38 TTTTTGTTTGGTTTGGTTCTTTTTTTGTGTGTGTGTGA .........x....x...:................... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 68896892 NA +3069 chr4 + 190214555 94108412 94108411 94108466 55 TACTTAAATCAATTGATGTGTCTAGGAGGTTATTTCATTTTTGGTTGTTGTTGTT chr4 + 94230402 77840967 77840966 77841021 77840967 77840966 77841021 55 TACTTAGATCCACTTATGTTTGTGGTAGGTTTTTTCTTTTTTTGTTGTTGTTGTT ......:...x.:.x....x.x.:.x.....x....x.....x............ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 16267445 NA +4272 chr4 + 190214555 94109988 94109987 94110065 78 TGGCGCACGTCTGTAGTCCCAGCTACTTGAGAAGCTGAGGCTTGAGAATCACTTGAGCCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:......--.....:............:.:......x.:..x...x.......:.....:..x:xx:.....:.. 10M2D66M 60/76 78.9% 76/94230402 0.0% 2/76 2.6% 18076786 NA +3049 chr4 + 190214555 94112781 94112780 94112834 54 GGAAGGAAGGAAAGAAGGAAGGGAGGAAGGGAGGGAGGGAAGGAGGGGAAGGAA chr4 + 94230402 32441870 32441869 32441923 32441870 32441869 32441923 54 GGGCGAAAGGAGAGAGAAAAGGGATGAGGGGAAGGAGCGGGGGGGGGGGAGGAA ..:x.:.....:...:::......x..:....:....x.::..:....:..... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 61670911 NA +36799 chr4 + 190214555 94115322 94115321 94116021 700 GAAGTACAAGGGCATGGATATAGGTTACTGTCCCTAAATATTTGTCGAGTA-TGTTTTGCAAATGTTTTCAGCCATGTGATTATCTGTACTGTGTCTTCCATATCAGATGAACTGTGACTGAAAAT---GCTGGGCAGCTTTATGATTATTTAGCAATCAGAATTCTTTATCCCACTTGAGTTTCCAATTCAAATAATCAAGTTCACTACACTTTAGTGTCTATGTACGTTTCCTTACT---CCCATTTGTTC-------AGACTTAAGTAAAGACAGTCACTGAGGGGAAAACAGCCCTTAAACCTTATACTCAGTAACTTTAGACTCACATCTACTTGCAGGAGAAATACATGACAGATCTATTGTTCTGTATTAGCAGGACATTGTCCCAGTATATGAACACATGCAAACTACTCAGGAAGGCCTTTGAATATTTAAGGCAAGACACTAGTGGCTCATCCCAGTGGGAACCACAGAAAAGGGGAACCTGATTAAATTTAATGTCATTGTCACTTTTTTTTC-ATTGGGAAGAATTATATAGGTAGCCATAGCTACCACACTGTTCAGACAGCATGACCACAATATTCCCCCTCAGAGGTTGGCGTCAAGGACTGAATTATTCACTCAAAGAATGTGATTCATTGCTGGATCTGGTTCTTACAAGATTAAAAGAGTCATCAGTACATAAAATGCATATACATCCTCTAGGAGC chr4 + 94230402 38288744 38288743 38289433 38288744 38288743 38289433 690 GAACTACTTCAGCTTGATTCTATGCTTTCCTTCCTAAATATATGTTAGGTCCTGTTTCCCAAATGTATTCAGCCATGTGATATGTAGTACCAGCTCATTCATATCAGATGAAGTGTGACTGGAAATAAAGCTGGA----TCTAT-----TTAAGAAGACACAGTCCTTTGCTCCAT---ATTTCCAAACCAAAATAGCCAAGTTCATTGTATTTT------TGCCTACATTTCATAACTGATCCTTTTCCTTCTAAGTGAAGACTAATGTAAAGACAATCGCTAAAGAAGCAGCAATCATAATACCCTATACTAACTAAATTCAGACTTACGGCTACTCACAGGAGAAATACATGACAGATCCATTGTTCTGTATTAGCAGGATATTGTCCCAGTATATGAACACATGCAAACTTT----GAAGGC-TTTGAATATTTAAGGCAAGACACTAGTGGCTCATCCCAGTGGGAACCACAGAAAAGGGGAACCTGATTAAATTTAATGTCATTGTCACTTTTTTTTCCATTGCTAAGAATTATATAGGTAGCCATAGCTACCACACTGTTCAGACACCATGACCACAATATTCTCCCTCAGAGGTTGGCGTCAAGGGCTGAATTATTCACTCCAAGAATGTGATTCATTACTAGATGTGATTCTCGC-AGATTAAAAT-TTTGTCAGTATATAAAATACACGTACATATTCTAGAAGC ...x...xxx:..x..:x.x..x.:.x::x.:.........x...:::..x-.....:x.......x..............xxx:x....::xx..x.:.............x........:....---.....:----.:...-----..x..x.:x..x.:.:....:::...:---.x..:.x..::x.....::........:.::.:...------.::x...:....x.x...---..:x..:x...-------.....x.x.........:..:..:.:.:::x.:..::.x.x.x...:......x.x...x..:.....:..:x.....::......................:....................:..............................x:----......-.................................................................................................-....xx..........................................x................:......................:...............x................:..:...x..:....::.-.........x-x.::......:.......:..::.....x:.....:... 51M1I74M3I6M4D5M5D27M3D36M6D18M3I11M7I156M4D6M1D97M1I139M1D10M1D39M 550/675 81.5% 690/94230402 0.0% 40/675 5.9% 55826578 NA +3295 chr4 + 190214555 94120838 94120837 94120898 61 GCGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....x....:.:...........::........x.xx.x:..x.:........::.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 18087634 NA +3945 chr4 + 190214555 94126812 94126811 94126930 119 ATCTGCATAAAGCTTGTCAGGAGTCAAAGTACTGCTTAACTCAGCAAAGGAAGTGTGGCATCTAGTGGACATTTAGTTTCTGCAATATTTTTCTGTATTTTGCAGAGAAATAGATCTGA chr4 + 94230402 38291722 38291721 38291835 38291722 38291721 38291835 114 ATTTGTGTAAAGCTTTGCAA-AGCTGTGCAGCTGCTCTGCTCTGCAAAGGAAGCCTGGCATCTAGTGGACATTTTGCTGTTGCATCACTTTTACCT-TTTTGCTTAG---CAGATCTGA ..:..::........xx..:-..:::x:xx:.....:x:...x..........:x...................x.:.x:....x:.:....x:x.-......xx..---:........ 20M1D75M1D10M3D9M 81/114 71.1% 114/94230402 0.0% 5/114 4.4% 55835090 NA +3617 chr4 + 190214555 94128751 94128750 94128821 71 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGACAGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 18095545 NA +4104 chr4 + 190214555 94136009 94136008 94136115 107 CACAGTGGCACACACCTGTAGTCCCAGCTACTCAAGAGACTGATGTGGGAGGATCATTTGAGACCAGAAGTTCCAGGCTGTAGTGCACTATGATGATCGTACGTATG chr4 + 94230402 76033197 76033196 76033301 76033197 76033196 76033301 105 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTG ........::...:--......:.........::.:..:....xx:xx.x.:.x..:....:x.......:.:::........x:..:x...x::.x.:x.:..:.. 14M2D91M 70/105 66.7% 105/94230402 0.0% 2/105 1.9% 18102812 NA +3010 chr4 + 190214555 94136667 94136666 94136728 62 AAAGAAAAAAAAGGAAAGAAAGAGAGAAAGGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAA chr4 + 94230402 24148911 24148910 24148972 24148911 24148910 24148972 62 AAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAA ..:.........::.....:.........::..xx.xx.x:x...x.:......:...:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 69987756 NA +3428 chr4 + 190214555 94136667 94136666 94136822 156 AAAGAAAAAAAAGGAAAGAAAGAGAGAAAGGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAAGAAGAAAGGAAGGAGGGAGGAAGGGAAGGGGGGGAGGGAGGAGGGAGGGAGGAAGGGAGGAAGG--AAAGGGAAAGAAGGAAACAAAGGAAGGAA chr4 + 94230402 59596360 59596359 59596515 59596360 59596359 59596515 156 AGAGGGAAAAGAGAAAGAACAGGCACAGGGGAAAGTGATGTGCTTAAATAGTATTGAGGGAAAGAGGGAAACTCAGATGAAGAATAGGAATGGGGGGCGGGGGGA--GAAGGAGGGAGGGTGGTCTGTTTAAAGAGCAGAAGCAGAGAAGAGGAGAAA .:..::....:..:..::.x..:x.x.::......x..x:x:xxx.:.x..x.xx:.:.:.....:.:..:xxx:..x.:..:.x:....x......x...:...--..:.....:....x..xxx.--x..:.::x.....x.:.x..::.:..:.. 105M2D20M2I29M 92/154 59.7% 156/94230402 0.0% 4/154 2.6% 34540307 NA +3021 chr4 + 190214555 94137530 94137529 94137580 51 AAGAAAAAGAAAAAGAAAAAGGAAAGAAAAGAAAAGAAATAGAGGAAAAAA chr4 + 94230402 65922617 65922616 65922667 65922617 65922616 65922667 51 AAGGACAAAAAAAAGGAAAAGGAATGGAAAGAGGAAAAAAAGAGGAAATAA ...:.x..:......:........x.:.....::.:...x........x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 28214913 NA +3149 chr4 + 190214555 94158498 94158497 94158566 69 ACTAAGAAAACTTCTTCTGCAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAACCTGGAGTCTGATGTCCA chr4 + 94230402 67348819 67348818 67348887 67348819 67348818 67348887 69 ATTAAGATAAATGCAGTTGGAAAAAAAAAAAAAAAGGAAAGAAAGGGGGAACGTAGAGTTCTGCCTCCA .:.....x..x.x.xx:..x...............:.........:::....x.:....::x::x.... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 26809679 NA +3384 chr4 + 190214555 94172023 94172022 94172105 83 AGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGAAGGAGAATTGCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----...x....:.:...........::........xxxx.x...x::........::....x.xx:..:..:.. 7M5D71M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% 18138823 NA +3675 chr4 + 190214555 94173210 94173209 94173282 73 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 18140005 NA +3094 chr4 + 190214555 94173499 94173498 94173563 65 AAAAAGAAAAAAAAAAGAAGGAAGCAGGGAGGAAGGAGGGAGGGGAAGGATAAAAGAAGGAAAGA chr4 + 94230402 91777258 91777257 91777322 91777258 91777257 91777322 65 AAAACAAAACAATAAAGAAAAAAGCAAGGAGGAGGTAGGAAGGAGGAGAGGAAAAAAATAGAAAA ....x:...x..x......::.....:......:.x...:...:.:..::x....:..x::..:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 2396241 NA +4185 chr4 + 190214555 94173511 94173510 94173616 106 AAAAGAAGGAAGCAGGGAGGAAGGAGGGAGGGGAAGGATAAAAGAAGGAAAGAAGGAAGGGAGAGAGGGAGGAAAGGTTGGGAGGGAGGGAGGGAAAAAGGCAAAA chr4 + 94230402 1500704 1500703 1500808 1500704 1500703 1500808 105 AAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAG-GGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaa ..:.....:...xx...:.....:..x...........x:...:..:x.:::..:.:..::.x..-...:x..x.x.xx....:x:.:...:......x..x.... 65M1D40M 72/105 68.6% 105/94230402 0.0% 1/105 1.0% 92672807 NA +3005 chr4 + 190214555 94185436 94185435 94185502 67 ATGTATTTATATATATTTGTGTATATATATATTTTATGTGTATATATATATATATATATATATATAT chr4 + 94230402 65743260 65743259 65743326 65743260 65743259 65743326 67 ATGTAAGAGTATGTATTTAAGTACAAATATATCTTAGGTATTTATCTATATACACATACATAAATGT .....xxx:...:.....:x...:.x......:...x..:.x...x......:.:...:...x..:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 28442176 NA +3106 chr4 + 190214555 94185459 94185458 94185523 65 TATATATATTTTATGTGTATATATATATATATATATATATATATATATATATATATATATGTTTT chr4 + 94230402 50293977 50293976 50294041 50293977 50293976 50294041 65 TATAGGTATTTTAGGTATTTATAGGCATATAAATCTATATAAATATAGGTATTTATAGATATTTT ....x:.......x..:.x....x::.....x..x......x.....x:...x....x..:.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 43891482 NA +12125 chr4 + 190214555 94196053 94196052 94196235 183 CAACATCCTT---CTCACATACTTCTCCTTCAGTTTTGCCGCCTTAGTGATGTAAGGCTGCTTTTCACTGTCATTTAAGTTATTCTACATCTCACCCAGCTTTTTTGCCACATCTCCAATAGAGATGCCAAGGTTTGTGGATTTGATCTTGGGGCGGAATTCTGAACAGAATAGGAAGAACCCAGA chr4 + 94230402 17789143 17789142 17789328 17789143 17789142 17789328 186 CAACAGCCTTACCTTCTCGTACTTCTCCTTCAGCTTAGCAGCCTTATTGTTATAGGGCTGCTTTTCACCATCACTGAGGTTGTTCCACATTTCACCAAGCTTCTTTGCTACGTCCCCAATGGATATGCCAGGGTTTGTGGACTTGATCTTGGGGCGGAACTCTGAGCAGAATAGGAAGAAGCCAGA .....x....---:..x.:..............:..x..x......x..x.:..:.............::...:.x.:...:...:....:.....x.....:.....:..:..:.....:..x......:..........:.................:.....:..............x..... 10M3I173M 152/183 83.1% 186/94230402 0.0% 3/183 1.6% 76406910 NA +12757 chr4 + 190214555 94196067 94196066 94196513 447 CATACTTCTCCTTCAGTTTTGCCGCCTTAGTGATGTAAGGCTGCTTTTCACTGTCATTTAAGTTATTCTACATCTCACCCAGCTTTTTTGCCACATCTCCAATAGAGATGCCAAGGTTTGTGGATTTGATCTTGGGGCGGAATTCTGAACAGAATAGGAAGAACCCAGAT-------------------------------------------------------------------------------GGTGGCCTTT-GGGGGCATTAGGATCCTTCT------CCTTCTTGCCTCTTTTAGCTGGTCCATAATCCTTCATTTTCCGATCATAGCGTTCTTTATCCACCTTGGCCGTTTCATCAAATTTAGACTTTTCTTTCCCAGACATTGTCT-------------------------------------------------------------------------------------------------TCCACCTCTCAGAGCACTTCGTGGAAAATTCTGCAAAATTGACAGGGACTTCTGGGTTTTTCTTCTTATGTTCTTCTCTGCACGTCTGCCCAAAGAAGGCATAAGCAGAGATCTTGCCCTTTGGTTTCTTGGGGTC chr4 + 94230402 44740562 44740561 44741191 44740562 44740561 44741191 630 CATATTTCTCCTTTAGCTTTGCAGCCTTCTGTTCATAGGGTTGCTTGTCTTTGGCCGACTGTTCAGACCACATTTCACCCAACTTCTTTGCCGTGTCTCCGATAGACAAGCCGGGATGATCATTTTTTATTTTTGGACGGTGTTCGGAACAGAAAAGGAAGAATGCAGATCTGAAACAAGAAATGACGTTTAAGCGAGAGGCTAGCGGAACGTACGCTGTGGGGTTTGTTTAATCCCATAAACACTCACGGTGGTCTTTTAGGAGCGTTGGGGTCCTTCTTCTTTCCCTTCTTCTCTCCTTTGGGAGGAACATAGTTCTTCATCTCCCTGTCGTAGCGAGCTTTGTCTCCCTTGGCCATCTCCTCGAACTTCCCTTTCTCCTTGCTGGACATCGTCTGCAGACACACGCAATGGAGAGGCGCGGGGGGCGGGATCAGACGGAGCCCCGCCGCCCCCACGGCCGCGCAGCAGCCGCCTTTCCACCGGCCTCACCTTCCACCGCTCCGAGCACTTCCGCGAGAACTCGGCGAAGTTGACTGACGAGTCCGGGTGCTTCTTCTTGTGCTCCTCGCGGCACGTCTGCACGAAGTACGCGTACGAGGACATCTTGCCCCGCGGCTTGTTGGGGTC ....:........:..:.....x.....xxxxx::..:..:.....x..x:..x.xxx:x:x.:.xx.:....:.......:...:......:::.....:.....x.x...::.:.xxx::xx...x..:..x..:...x:...x........x........:x.....-------------------------------------------------------------------------------.....:....-:..:..:..:..:.......------.......x:...:...:.xx..xx....:.:......:.:..x:..:.....xx....:..:x........:.:..x..:..:..xxx:..:..:..x.::.....:....-------------------------------------------------------------------------------------------------......x...x.........xxx..:..:..x..:..:.....x.:x:xx..:....x:........:..:..:..x.x..........x.:...x.x..:..x.x:..x.........:x:..:..x........ 170M79I10M1I20M6I111M97I136M 311/447 69.6% 630/94230402 0.0% 183/447 40.9% 49455505 NA +8348 chr4 + 190214555 94196235 94196234 94196377 143 ATGGTGGCC-TTTGGGGGCATTAGGATCCTTCTCCTTCTTGCCTCTTTTAGCTGGTCCATAATCCTTCATTTTCCGATCATAGCGTTCTTTATCCACCTTGGCCGTTTCATCAAATTTAGACTTTTCTTTCCCAGACATTGTCT chr4 + 94230402 17789826 17789825 17789969 17789826 17789825 17789969 144 ACGGTGGTCGCTTTGGGGCATTGGGGTCCTTCTTCTTCTTGCCACCCTTAGCTGGGCCATAGTCCTTCATTTCTCTATCGTATCGTACCTTATCAGCCTTTGCCATTTCATCAAATTTAGCCTTCTCCTTGCTTGACATGGTCT .:.....:.-:..x........:..:.......:.........x.::........x.....:..........::.x...:..x...x.:.....x:....x...:...............x...:..:..x.:x.....x.... 9M1I134M 113/143 79.0% 144/94230402 0.0% 1/143 0.7% 76406409 NA +3132 chr4 + 190214555 94203025 94203024 94203077 53 TTTTTTAAATTCTTGAAATTAAAACAAATTCTGCAGGATATTTTTACTGTATA chr4 + 94230402 66874055 66874054 66874107 66874055 66874054 66874107 53 TTTTCTATATCCTTGAAATAAAAAAAAATCCTGCAGAATATTTTTTCAGAATA ....:..x..:........x....x....:......:........x.x.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 27328970 NA +3161 chr4 + 190214555 94203169 94203168 94203219 51 TTATTTCTTTTTTTTTTGGTATGTGTGTGTGAGTATGTATGATTGTTTACA chr4 + 94230402 42975005 42975004 42975055 42975005 42975004 42975055 51 TTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGATTGTTCACA ..x...:.:...........x....x:....x..:...:........:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 51228164 NA +3274 chr4 + 190214555 94204905 94204904 94204976 72 GTACCTGTAGTTCCAGCTACTTGGGAGGCTGAGATGGGAGGATCGCTTGAGCCTGGGAAGTCAAGGCTACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..x..................::........x:xx.x.:.x.:.....:..::.:.:x.:x:....::.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 18171699 NA +3356 chr4 + 190214555 94215490 94215489 94215563 74 GTGCACCTGTAGTCCTAGCCACTTGGGAGGTTGAGACAGAAGAATTGATTGAGCCCAGGAGTTTGAGGTTATGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:...:.....::...:....x.xx:x...x::x....:.....:..:..x:..:.:.:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 18182286 NA +5586 chr4 + 190214555 94226085 94226084 94226301 217 TCAAAATATTTTTCTCCT---TTTTATTCTCTTG---------CAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACA----TTCAA-CAAAGATACAGTGATTATAGTGTAAG chr4 + 94230402 38313787 38313786 38314012 38313787 38313786 38314012 226 TCTAAGTCATTTTCTCCCATCTTTTATCCTATTGAAATGGCTACAGGGTTCTCCAGCATCCCAGAAACTCCTGAAGCTGAGAGGACAAGGGAACTGTCTTATTTCAAGCACCGAAGAGGGGTACATTTCCTAGATGTGTCTTCAGACAGTGAAGATGAAGT---ACCAAGAAAAGTCAGTGC--TTCAAAAGAAAACAAGGCTCCAAGGAAAGAT---GTGATTTTAATGTAAG ..x..:.xx........:---......:..x...---------...::xx:..:..::.:...........x..x:x...:..:.x.:x:::xx.:..x........:x.:.:......::....x.x:x.x...x.......x..:..........xx..---x....:xx:xx:..:.:.--.....:........----.:...-x......---......x..:...... 18M3I13M9I118M3D18M2D14M4I5M1I7M3D16M 146/209 69.9% 226/94230402 0.0% 25/209 12.0% 55912298 NA +50979 chr4 + 190214555 94252497 94252496 94254488 1992 TGTCGTTGAATTCTTCTGTATTCAATAGGAATAGGTAAATGTTTTAA-GTTTTTATTTGAAGTCTATCTTTATA--------------TTTATGTATTTCTAATTTA-------------GTTACTGTTTTTGTCTTTTATATACAGATATGCAATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAA------AAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGA---TGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGCTCTGGTAAGGCTTTATTCTTTTTTT----CCCCTTGTATGTGTGTGTGTATTTAATTCACAGTACCGGTTATAGTCAAGTTGTCTTCAGCCCAGGTAAGCATAGATGGGTGGCCTTATCCTGTGTAAAGTCAAACATTACTTTCATTGTAAGCCAATAGTATTTCAAATAGTGTCATATGACCTAATTTTGAATGAATTAAGGGGTGATTTTCCTGAAAAAACCCAAGCTGATTGGCTGGGAATACTGTCACTCATTCCTTTGCATAGAAACTTCGTTCATTTCACTGCAGAAGAAGAAATTAGAGCTTACATTTAGGAAGGAGTTGTTTGCTAGCCTGTTCTGATCTGTTACTGCTGAGACACCATGCAGAAAGCAAGAATGTGGCAGAAATTTTACTACAACTACTTGAAGAGCAATAGCAACGGCCAGGGGAGCTCCATGATTCAAAATGCCAGCCTAAGTGTTTTATGCTTCACCACAAAAGAAGCAATTGT----TTATTTTCTTTTTTTCTTCTAAAAGTA--ACAGCTCAGTCTCTAACATGTTTTTGTTGGTTAAGCAACGTGGCCA----TTTTATGGAGTGTAGCAGGCTGCAGCGTTTTTAATTGGAAAGATAGAAAAATTTCTGGAAGCCTATAATTCAAGCGTTAGGTGAAGGGAAGGCATAAGCAC-TGGTAAGTACACTTTGCATGATCATTTTCTGGAATTTGACTTTCTATAAACAGGTTGTATACAGAATACCTGC--ATTTTGAGTTTTATGAATGCCAACAGTCATCAAATCTTATTCATACAGATAAA-----------TATAAGAACTCTTAA-----------------ATTTTGCTTCAACCCTTA---CGTGGGCTTTTATAGCAGGAATTGTATATAGGCCTGTTGTAAAAGCAATATGGATGATTTTTTACAGCTTTAAAAG--ATGCAGCGACTCTTGATGCTTTATAAAATTTTTTAGGAAGTTTTATTCCCTAAGTTAGGGAGCAAAGTTGCTTTTGTGGTTAATTTTATACTTGAAACAAATCTAAATGAGCATTAAATGCCCTGATAAGTGTCTT-----GAAGTGGCAA----TAGGGGAGAGTCCCTGAACAATGGTTGTAAATACATTTTTTTAATTAAAATATTTGAAAAATACAGAAACAACATTAATAATATTCCATAGCTTTAAAAAATAA----TAATAAAACCATTTGTTTTGCCTGAAGCCTTTGCTTTTCCAGAGAACATCTGTCAAA--GCAGGCCCTTTCAAAACTTGTTTGGCTTTGCCTGAG-TGATTTATTTGTTAAAGTATTTGCTGAAGGGCTTTCTTGTTCTTCTTTTCTTCCTTTTCTTCTTTCTTTTAATCTTTAATGGTCTCTTATGTTGTTGCAGAGTTGGGTTGCTCAGGCTTGTTGAGATTCTAA---TTTATTTAATAAGATATGCAATTATCTGCA-CTA---GTTTGTTTAGTTGCTGTAAATACTTGCCCGAATATCTTATAGTAAAAGTAAATTATA--CAATTTTACCAGAGGTATA chr4 + 94230402 38334452 38334451 38336403 38334452 38334451 38336403 1952 TGTTGTTGAGGCGTTGTGTGTT-GATATGTATGAAACACAGttttaatattttaatatgaaattttattttGGAAGAACGCGGAGGTTTTTATTTGCCCCTAACCAATATGTGTTGACTTGTTGCCTTCTCTGTATCGCATCTGTAGGCGTGGGATTTCCTTCCCCAAGTGAAGTTTCTAACTGGACTGAAGTCTCTGCAAATAGCAGAAGTGA---TAAGAAG------AAAGTGCAGCAGAAACGGAAATTTTCTGGGAAAGAGCAGAACTGCCTTAGGAAAAAGCATAAAGCCAAAGCAAATGTTTGGAGCACTAAAACAGAAGTACAAGACTCAGAGGACGAATCAGCTGCCGAAGATGGCGGTAGCTCTCTTGATGAGGACTATGGCAGTGGCGATGAAGTGGTGGAGAGTGTTTACAAAAGTAAAATCCTTAGCTTTCTGCAGGATGCTTCCCCAAGTGAACTCACTATGATCCCCCAGTGTTCTGAGAAAAAGGTTCAGAAGATAATAGCACTCCGGCCCTTTAATAGTTGGGAAGCTCTGGTAAGTCTGCATTCTTGTTTTAAGATCCCCAGCATGC---------------------------CTAGAGTCAAGGTGTCTTCGGTCTAGAGAGGCATAGATGGGTGGCCTTAGCCTGATTAGGCTAAAATGCTATATTCATTGTAAGCCAATAGCATTTCAAACAGTGTCATATGACCTAATTTTGAATGAATTAAGGGGTGATTTTGCTG-AAAAACTCAAGCTGATTGGCTGACATTACTGCCACTCACTTTTTAGCACAGAAACTTGGTTGATTTCACTGCAGAAGAAGAAATTAGAGCTTTCATTTAGGAAGGAGGTGTTTACTAGCCTGTTCTGAGCTGCTTTAGCTGAAAACCCATGGAGAAGACAAGAATGTGGCAGAACTTTTACTGCAGCCTCCTGA------------------AGGGTAGCTCCATTACTTAAGATACCAGCATGATTATTTTCAGTCT---CATACAAGAAGCAGTTGTCGTCTCTTTTGCTCTTTTTTTTTTAAATCTACTGCAGCTTGGTTTCTAGCATGGTTTTGCTGGCTAAGCAGTGCAGCCATTTTTTTTTTTTAGTGGAGGAAACTGCTGTGTTTTT-ATTAGTAAGGTAAAGCA----TCAGAAGGATAAACCACAGTCCACGACAGAAGGAAAAGCAGTGGCACTTGGTAAGTAGATTATCTGTTGTCA----CTGGGATGTTACTTT-----GAAATGTTTCCCATGGGTTGCTTGTTGCCTTCAACTTTCGTGCATTTCAGTTAACTGCAAAAC--ATCAGACCAGGTAGAAGCAATGTTTTAATAAGAGATCTGGAGTGCTTTACAGCAGACTGTCTTGGTTAAGTCATTAGTGCTTTGGATTTTAAGGCAATAACTCTGTGTAGGCCCTGTTAAAGAGTAACTGGTATGTTTTTTTCCATCAGTAAGTGTTCTGAAACCACCCCTATCGATGTATACAA-----GATGTGCTTGTATTTT-----TTTAAGAGCAGAAT-----------ATAATTTCATCAATATTACTAAAACAATAATGTATTATTTGGTGCGTGAAGTGTCTTACCACAAAACGGTAAGGGTTGATAAAGAAACTTTTAAGAA----AACAAAATCATGTTTGTACTTTGTG---TTGCAAAAGGGGGAGATAAGA-GAAGAATCTTTGGGGG--GGAAAAAATGAGAGGTACAAAAGAAATCCGTTTTGCCTCAAGCCTTTGGCTTCCTACAGAACATCTGTCATATGGCAATTCCTTTCTAAACTTGTTGGGTTTTGCCTGAGCTTAATTCTCTGCAGAAATATTTGCTACAGGGC-----TGTTCTCTTTTTCT-----------CTGTGTAAAATATTTAA------------------CAGAA--AAACTGTATGGGCCTGTTCGTGTTCAAAATCTTTCTTTCCTAAAGGCTGCTGCTGTCAGCAGCTACATGTTTATGTAG-TATTGTGAATACTTGCCTGG---------AGTAGAAGTGATTTGCAGCAAATTTTAACAGATGTTTA ...:.....:x:x..x...:..-:...x.x..:::xx.xx.......-:....x..x....:.:.xx:...:x.--------------.....x.::::....::x.-------------...:.:x.:.:...x.:x:..x.::..:::..x:..x.x:x..x.x......:...:.x..:x.:.xx.....:...x...:x..:x:..:.x.---...:..x------...:::x.:.x:....:.........x:x.....x:..:..:x..:...:x..:..:.:....:x------........xx.::x.x..:.x..xx..xx.......x..:x.:..x....x.x.:..---..x......:..x..x............:.:.....:..x......:.....::..x:..:...:.......:...x:...:..x..:........xx:x:.......:...x....:..:.........x.........:...........:..x........................:...........x..x:......x....----:...:x.:...:---------------------------:..x.......x.......:.:.:..:x.:...................x....xx..::x.x...:::..:x..................:........:...........................................x...-......:...............:x.x.....:......:.::..x...:........x...x..............................x..............x.....:..............x...:.x:x.....:.xx.....x....::................x.......:..:.:x.:...------------------....x........x.:.:..:..:.....x.:.x.:....xx.::.---..:.x........:....----.:x...x..:.....:..:....xx..--:.....::..:....:....x.....:...:......::.::....----....x.xx....x..x.::....x.:......-...:.x...:..:.:x.----:::....xx..x.x:x..:x.xx:::xx.....:..:...xx:....-.........x.:.x.x::.x:...----....:..x.x.....-----:.x.x...x:x:.::.:x.:.:..:--x:..::.x...::..x..x:..::x:x.xx....x.--..:x:xx...:..:.-----------x......:x...x:.-----------------:.:...x..x.::.x...---.x.x..x.....x:...:x..:.x.:.:......:xx.xx..:..:..:xx.x...x......x..x.xx...:x.--x..x.:.x..:.:.:x:.x.x....x..-----x.x.x:x..x....::-----..x::.....:.:.-----------x......:..xxx.:xx..x..xx:..xx:x.:....xx..x:x:.xx.........-----:..::..:..----.::x::...:x.::.x..x..----x::...xx...x...x..x..x:x:---...x....x:x:..:.:..x.-x..x...x..:x:x:.--xx.......:.----..xx...:xx..::.........x.........x:..:.:.x.............x.--...:x:......x.........x..:..........-.x.x..x.:..:x:..:........:x.....-----......::......-----------:.x:x.xx...x.....------------------....:--::::..:x::...:....x:x:...x..---...x...xx...::xx...x::.:..x...-...---....:.x...-.::...:..........:.:---------....:....:.x..::.--x.......x....x..x.. 22M1D24M1I26M14I19M13I94M3D7M6D65M6I57M3I208M4I12M27D148M1D194M18D46M3D18M4I27M2I46M4I32M1D17M4D47M1I24M4D15M5D25M2I36M2D15M11I15M17I18M3I76M2I28M5D16M5D14M11D57M5I10M4I21M4D25M3D21M1D16M2D11M4I57M2I36M1I32M5D14M11D17M18D5M2D28M3I30M1I3M3I10M1D20M9D17M2I19M 1275/1840 69.3% 1952/94230402 0.0% 264/1840 14.3% 55918045 NA +17601 chr4 + 190214555 94252543 94252542 94253028 486 AGTTTTTATTTGAAGTCTATCTTTATATTTATGTATTTCTAATTTAGTTACTGTTTTTGTCTTTTATATACAGATATGCAATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGCACAAAATGGCTTTA------ACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGA---TGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGCTCTGGTAAGGCTTTATTCTTTTTTT chr4 + 94230402 38327380 38327379 38327855 38327380 38327379 38327855 476 AGTTTTTATTTGC------CCTTAACCAATATGTGTT---GACTT-GTTGCCTTCTCTGTATCGCATCTGTAGGCATGGGATTTCCTTCCCCAAGTGAAGTTTCTAACTGGACTGAAGTCTCTGCAAATAGCAGAAGTGA---TAAGAAG------AAAGTGCAGCAGAAACGGAAATTTTCTGGGAAAGAGCAGAACTGCCTTAGGAAAAAAAAAAAAGCCAAAGCAAATGTTTGGAGCACTAAAACAGAAGTACAAGACTCAGAGGACGAATCAGCTGCCGAAGATGGAGGTAGCTCTCTTGATGAGGACTATGGCAGTGGCGATGAAGTGGTGGAGAGTGTTTACAAAAGTAAAATCCTTAGCTTTCTGCAGGATGCTTCCCCAAGTGAACTCACTATGATCCCCCAGTGTTTTGAGAAAAAGGTTCAGAAGATAATAGCACTCCGGCCCTTTAATAGTTGGGAAGCTCTGGTAAGTCTGCATTCTTGTTTT ............x------:...x.:xxx.....:..---:.:..-...:.:x.:.:...x.:x:..x.::..::...x:..x.x:x..x.x......:...:.x..:x.:.xx.....:...x...:x..:x:..:.x.---...:..x------...:::x.:.x:....:.........x:x.....x:..:..:x..:...------.x..:...xx:...:x........xx.::x.x..:.x..xx..xx.......x..:x.:..x....x.x.:..---..xx.....:..x..x............:.:.....:..x......:.....::..x:..:...:.......:...x:...:..x..:........xx:x:.......:...x....:..:.......:.x.........:...........:..x........................:...........x..x:......x.... 13M6D18M3D5M1D94M3D7M6D49M6I73M3I208M 331/467 70.9% 476/94230402 0.0% 28/467 6.0% 55925163 NA +11404 chr4 + 190214555 94264677 94264676 94264909 233 TATTCA-ATTATTTTTCTTTTTATGCTATAGTTCACAAAGATGTCCAAAACTAATGGCTTATCAGAAGATTTGATATGGCACTGTAAAACACTGATCCAAGAAAGAGATGTAGTTATAAGGCTTATGAACAAATGTGAAGACATTTCAAATAAATTGACCAAACAAGTTACCATGCTTACTGGAAATGGAG---GTGGATGGAACATAGAACAACCTTCCATTCTAAACCAAAGGTA chr4 + 94230402 38341968 38341967 38342202 38341968 38341967 38342202 235 TATTCATAGTATTTTTTTAATTTT--TGTAGCTTTCAAAAATAACTAAGACTGCTGGCTTGTCAGAAGACATTGTGTGGAACTGCAAGACCCTGCTGAAGGAGAGAGATGTGGTTCTCAAGCTCATGAATAAATGTGAAGAAATTTCAAATAAACTGACAAAACAAGTAACCAAGATTACAGAAGATGGAGGATGCAGGTGGAACGTAGAGCAACCCTCCGTTCTGAATCAGAGGTA ......-.x.......:.xx..x.--.:...:.:x....:..:x.:..:...:x......:........:x.x:.:...x....:..:..x...x.xx.:..:........:...x.x.:...:.....:...........x............:....x........x....x.x....x.:.:......---.::.:......:....:.....:...:....:..:..:..... 6M1I17M2D165M3I43M 175/231 75.8% 235/94230402 0.0% 6/231 2.6% 55922709 NA +11597 chr4 + 190214555 94264677 94264676 94264909 233 TATTCAATTATTTTTCTTTTTA--TGCTATAGTTCACAAAGATGTCCAAAACTAATGGCTTATCAGAAGATTTGATATGGCACTGTAAAACACTGATCCAAGAAAGAGATGTAGTTATAAGGCTTATGAACAAATGTGAAGACATTTCAAATAAATTGACCAAACAAGTTACCATGCTTACTGGAAATGGAG---GTGGATGGAACATAGAACAACCTTCCATTCTAAACCAAAGGTA chr4 + 94230402 38342958 38342957 38343193 38342958 38342957 38343193 236 TATTCA--TAGTATTTTTTTTAATTTTTGTAGCTTTCAAAAATAACTAAGACTGCTGGCTTGTCAGAAGACATTGTGTGGAACTGCAAGACCCTGCTGAAGGAGAGAGATGTGGTTCTCAAGCTCATGAATAAATGTGAAGAAATTTCAAATAAACTGACAAAACAAGTAACCAAGATTACAGAAGATGGAGGATGCAGGTGGAACATAGAGCAACCCTCCGTTCTGAATCAGAGGTA ......--..x.x..:......--.x:.:...:.:x....:..:x.:..:...:x......:........:x.x:.:...x....:..:..x...x.xx.:..:........:...x.x.:...:.....:...........x............:....x........x....x.x....x.:.:......---.::.:...........:.....:...:....:..:..:..... 6M2D14M2I168M3I43M 176/231 76.2% 236/94230402 0.0% 7/231 3.0% 55921719 NA +7033 chr4 + 190214555 94270714 94270713 94270887 174 TCTCTCTTTACCAGTTTGTCACTCAAGCCCTATCAGAAGGTTGGTTTGAATTGGCTGGCATTGGTACATAAACATGGACTTAATGGCATTTTGGCAGATGAAATGGTAAGTGT---ACTTTATTTCTAAGATTTGTTGTTGAAAGTGTCATTAAAAGGTATTCTTGCTGTCATTTAA chr4 + 94230402 38344825 38344824 38344994 38344825 38344824 38344994 170 TTTTTTTTTCCAAGTTTGGAACTCAAGCCGTACCAGAAAATTGGTTTAAACTGGTTAGCACTTCTTCATAAACATGGATTGAATGGTATTTTGGCTGATGAAATGGTAAGTATGAAACTGATTATTTGACA---GTTGTTAAAAGTATT----GGAGATATCTTAGTTATAATCTGA .:.:.:...x.x......xx.........x..:.....::.......:..:...:.:...:.xx.x............:.x.....:........x...............:.---...xxx.x.:.:.x.---......:.....:.:----::..:...::.x.:.:.x..:.:. 113M3I15M3D15M4D24M 122/167 73.1% 170/94230402 0.0% 10/167 6.0% 55925889 NA +3804 chr4 + 190214555 94270756 94270755 94270823 68 GGTTTGAATTGGCTGGCATTGGTACATAAACATGGACTTAATGGCATTTTGGCAGATGAAATGGTAAG chr4 + 94230402 14436145 14436144 14436212 14436145 14436144 14436212 68 GGTCTGAACTGGATGATCTCCTTGTATGAAAATGGCGTTAATGGCATTCTGGCAGATGAAATGGTAAG ...:....:...x..::x.:xx.::..:..x....xx...........:................... 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% 79834611 NA +6695 chr4 + 190214555 94273614 94273613 94273718 105 TAGGGCCTAGGAAAAACTATTCAAGCCATTGCATTTCTGGCATACCTCTATCAGGAGGGTAATAATGGTCCTCATTTGATCGTTGTTCCAGCTTCAACTATAGGT chr4 + 94230402 38346075 38346074 38346179 38346075 38346074 38346179 105 TAGGGCTTAGGAAAAACAATTCAAGCTATTGCATTTCTTGCCCATATCTACCAAGAAGGTGATAGAGGTCCGCATTTGATAGTTGTGCCAGCTTCAACATTAGGT ......:..........x........:...........x..x:.:x....:..:..:...:...:x.....x........x.....x...........xx..... 105M 86/105 81.9% 105/94230402 0.0% 0/105 0.0% 55927539 NA +4820 chr4 + 190214555 94274728 94274727 94274972 245 TGTTCCATAGATAACTGGTTAAGGGAAGTTAATTTATGGTGCCCTACTTTGAAGGTCCTCTGTTACTATGGTAAGAATATGTCAT-----------TCTGCT------------------TTTAACTTTGGAAATTAAAAAT--------AAAGTACAG--------------------CACAATAAA-------TAGTCATGTGTTTA-----------------TTGTTTTTAAATTC--------------------------------------TAGGTTCTCAAGAAGAACGTAAACAAATTAGATTTAACATTCATAGTAGATATGAAGATTACAATGTAATTGTGACCACGTAAGTA chr4 + 94230402 38347781 38347780 38348143 38347781 38347780 38348143 363 TATTTTACAGATAACTGGATAAGAGAAGTTAACCTGTGGTGTCCTGAACTGAATGTCCTTTTTTACTATGGTGAGCA-GTGTCATTTAGAAATCGGTCCACTCATACAGTTGGTCGCATGTTCAGCCTCAGAAAACATTAATTGCTCATAGAAGCATTGTTTTTAGATAATTGTTCGTACACAAGAAAACAGCATTAAATATGTGTATATAACCTTGATTTTTAGTTTGTAATTAAATTTTATATGCATATGTAGTTGTGCTCTTTTTTTTCCTTCCGTAGGATCCCAGGAAGATAGGAAACATCTCCGGGCAGACATTAGTAACAGAGTTGTAGATTTCAATGTCATTGTAACTACGTAAGTA .:..::.:..........x....:........::.:.....:...:xx:....x.....:.x..........:..x.-:......-----------..::..------------------..:.:.:.::....x:.xx...--------:...:.:x.--------------------.....x...-------..:x:......x..-----------------....xx.......:--------------------------------------....x..:..:.....xx.x.....xx.:x.:x:x:.....x:..::...xx..x.....x......x.....:..:......... 77M1D7M11I6M18I22M8I9M20I9M7I14M17I14M38I86M 175/244 71.7% 363/94230402 0.0% 120/244 49.2% 55926947 NA +10407 chr4 + 190214555 94276333 94276332 94276613 281 TGACAGATATAACTGTGCGATCAGCAGTTCTGATGACCGTAGTCTGTTTCGACGGCTGAAACTTAATTACGCAATTTTTGATGAGGGCCATATGCTGAAGAATATGGGCTCCATTCGCTACCAGCACCTTATGACAATTAATGTAAGAGA-----------------------------ATGTTT--GTAAAGTTTTCCAAATTACTGTAAAATTTAGATTACGTAATTTA-ATATATGTAGTATTTATTAGCAGAATCTGTATTATGTAGTTTAATATATGTAGTATTCTGTGTTAGCAAGTTTTTTCTGTA chr4 + 94230402 38348714 38348713 38349018 38348714 38348713 38349018 305 TGACAGCTATAACTGTGCAATTAGCAGCTCAGACGATCGAAGTCTGTTTCGCAAGGTGAAGCTTAACTATGCAATTTTTGATGAAGGTCATATGCTCAAGAACATGAGCTCTGTACGCTACCAGCAGCTTATGAGAATTAATGTAAGAGACTTGGTAGTTGAGAGGAGGGGGTGGGGGGATGATTCCCTGGGGTTTTTTCTGTTATCGTTA---TGGAAGGAAGGAGTTTATATACACATGGTGTTT-----CAGAAACTACAGTATGCAGGTGGACATAAGTTGTGGTGTGGTTTTAGTAGTTTTTCCTGCA ......x...........:..:.....:..x..:..:..x...........xx:.x....:.....:..:..............:..:........x.....:...:....::.x...........x.......x...............-----------------------------...x..--x.:::.....::xx:...::..x.---.x::.xx.x.x.:....-...:.::.:..:...-----.....x..::.x....:..x.x:.:...x..x..:x.x..xx..x:xx.......:...:. 150M29I6M2I24M3D17M1I15M5D61M 200/273 73.3% 305/94230402 0.0% 40/273 14.7% 55927619 NA +9581 chr4 + 190214555 94277018 94277017 94277184 167 ACAGGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTACAGAACAATCTGTTAGAACTCATGTCGCTGTTGAATTTTGTTATGCCACACATGTTTAGTAGTAGCACCAGTGAAATACGAAGAATGTTTTCCTCTAAGACAGTAAGCATAAATGCATATTTTCTCC chr4 + 94230402 38349849 38349848 38350012 38349849 38349848 38350012 164 ATAGGCAAAGCATCGCTTACTGCTAACAGGAACTCCAGTTCAGAATAACCTGTTGGAATTGATGTCTCTCTTGAATTTTGTTATGCCACATATGTTCAGTAGCAGCACAAGTGAAATCCGAAGGATGTTCTCTTCAAAAGCAGTAAGTGT---TGTATATTTTTTTC .:.......xx.:..:..:.....x.....x..x..x..x.....:..:.....:...:.x.....x..x....................:.....:.....:.....x........x.....:.....:..:..x..::.......::.---..:.......:.:. 150M3D14M 130/164 79.3% 164/94230402 0.0% 3/164 1.8% 55927169 NA +3441 chr4 + 190214555 94277020 94277019 94277117 98 AGGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTACAGAACAATCTGTTAGAACTCATGTCGCTGTTGAATTTTGTTATGCCACACATGTTTAGT chr4 + 94230402 14438487 14438486 14438584 14438487 14438486 14438584 98 AGACAACAAACAGATTGCTGCTTACAGGGACTCCTTTACAGAATAACCTCCATGAACTGTGGGCATTGCTTAATTTTCTTCTACCTGATGTCTTTAAT ..:...xx...x.x........:.....x..x...x.......:..:..x:xx.....xxx.x.::..:.x......x..x.:..xx.::.x....:. 98M 66/98 67.3% 98/94230402 0.0% 0/98 0.0% 79838533 NA +7259 chr4 + 190214555 94278349 94278348 94278523 175 TTGTGTAATAATACTGTTATTGCAATAATTTAAGTGAATAATTC---CTAAAAGGATATGTTTT---TATTTTGCTCAGAAATCAGCAGATGAGCAAAGCATATATGAAAAGGAGAGAATAGCACATGCAAAACAAATTATAAAGCCATTTATTCTCAGAAGAGTAAAAGAAGAGGTAATG chr4 + 94230402 38350215 38350214 38350384 38350215 38350214 38350384 170 TTTTACAATAGTAGTGTTATTGC-----------TGAAAACTTCACCCTGCAATTGAATTTTTGCAATATTTTCCGTAGAAGACTGCTGAAGAGCAAAGCACGTATGAAAAGGAAAGGATTGCACATGCAAAGCAGATAATAAAACCATTCATCTTGAGAAGAGTAAAAGATGAGGTAATG ..x.::....:..x.........-----------....x.x...---..:x..xx:x..x...x---......x.x:....:x.x..x..x..........::...........:..:..x...........:..:..x.....:.....:..::.x..............x......... 23M11D10M3I17M3I114M 127/164 77.4% 170/94230402 0.0% 17/164 10.4% 55928134 NA +12670 chr4 + 190214555 94278601 94278600 94279055 455 TTTTTTCTGTCTCAGGTTCTCAAGCAGTTACCCCCCAAGAAAGATCGAATTGAGTTGTGTGCAATGTCGGAGAAGCAGGAGCAACTCTATTTGGGTCTTTTCAACAGATTGAAAAAATCTATCAATAACTTGGGTATA----------AT---------CTGATTTTTACTCTTTTA-------------------TGTGAAAAAGAATCTTGTACTGGGGATGCATTTTGTTTAGTCATATAATGG---------------GATTTGTGCATTTTAAAAAATT---ATCTGGAATTTGAGGAAATAATTTTAAAACTTA-GTT-------GATATATTTCAACAGTTATCC-GCTTGGTTTTATTTTT-----TACTGTGTTCTCTTTGAGTCACAGAAAAAAACACAGAAATGTGCAATGTCATGATGCAGTTGAGGAAAATGGCCAATCATCCTTTATTACATCGCCAATATTACACAGCTGAAAAACTCAAGGAAATGTCTCAGCTTATGCTAAAGGTAAG chr4 + 94230402 38353103 38353102 38353618 38353103 38353102 38353618 516 TTTTTATTTTCTCAGGTCCTTAAACAACTACCTCCCAAAAAGGATCATATTGAATTATGTGCCATGTCTGAGAAGCAAGAGCAACTATACTGTGATCTCTTAAACAAACTGAAGAAAACTATGAAGGGTAACGGTATATGACAGTTTCATTTCCTTTTGCTGGATTTTTTTTTCCTAAGCTTAGATTTCTGTTGAGTGGGACGAAAAAGTTTTTGCTTTGTAAAGATGTCTAATAATTATAAAGTGACTATATTCCTTCTGTGATTTAT---TTTTAAATAGATGGAATATTGAATATAAAGAATATTCCTTAAAACTAATGTTCTCCTGAGAGATA----AAGATGCATCCAGATCTGTGCTGCTTCTGCATATACCTTATTTTTTT--GTTGACAGAGAAAAATTCTGATATGGGAAATGCAATGATGCAACTTAGAAAAATGGCTAATCACCCTCTCTTACATCGTCACTATTACACAGCTGACAAACTCAAGACAATGTCCAAACTTATGCTCAAGGTAAG .....x:.x........:..:..:..::....:.....:..:....:x.....:..:.....x.....x........:........x..:.xx.:...:..x....:.:....:...x....x..x:::xxx......----------..---------...:x....x:.:.::..-------------------..x..x:..:..x:..x.:..xx.x.x:x..x.:xxx..:.:...x.:..:---------------.....:.---.......x.:x.---..x.x....x.:.:...xxxx::........x.-...-------..x...----..x.xx:....-.x.:x..x:.::..:.-----...:x.:..:.:..--:x.x.....:.....:x.x..x...x.x....:x........::.x..:........:.....:...:.x........:..x..............x.........:x......:x.:........x........ 138M10I2M9I18M19I51M15I7M3D12M3I33M1I3M7I6M4D11M1I16M5I14M2D135M 315/446 70.6% 516/94230402 0.0% 79/446 17.7% 55925498 NA +15150 chr4 + 190214555 94280565 94280564 94281612 1048 GTATACTGTGTT---TTGTTTTGTTTTA------AGGAACCTACACATTGTGAGGCTAACCCTGACCTGATCTTTGAAGATATGGAAGTTATGACAGACTTCGAACTACATGTACTTTGTAAACAGTACCGACACATTAATAACTTTCAGTTAGACATGGACTTGATTTTAGATTCTGGAAAATTTCGAGTTTTAGGATGCATCTTGTCTGAATTGAAACAGAAG----GTATTAAAAAAGAATGGCGTTTCTTTTG-TATTTTCTCAATTACTTTAACTTCTTAAA----GCAATTCTGGCACACTGACTTGCTTGAATTAGCCTATGTCTGTTCTGCATTCTTCCAG---AACTTAGTGTTT------TGAACATTTTCTTGACGTATTTTCTTGATTACCTCCTTTCCTCTGTTGAACCTCAGACAAAAACAATAGAAAGTT--AGTAGACTGTATCTGTATTGATGTTTTAAAAAAATCTTAATTGTCATTATTTCATAGG------TGACAATCTGTATG--TGTGC---------TTCAAA----ATTAGTTTTTAAAGAC---ACTATTTGTTAGTTATTTAAGTAATGCTGCCGTTT-----------ATGTGTGAAATAGCCTAAATTTGTAAAATCACAGTCCAGA-----TAATACATAC---------------ATAAGCAGTTGTCCACATTTTCCGAC-----GTTTTTCTTATGAAAAGGAAGT--AATTTAACTGTTCTTAAAATCAAAACTGAGAGCTAGCTTTTAGCCCTGAAGTTAAGGCAGTTTATTCATATATAGGCTGC------------AATAAGACATACGTCTTCGGTATTACTGATTTGTATTAAAGAAGCAGTTTATCACAG-AGAA-------------TTTTCTGCAAATTTATCAACATGATATAAGTAACACTTCTAACTGTTTAAACCTG----TCAAGG--------------CTTTGAGT---AGTAAAACGATT------TTTTCTATTTCTAATTCATGTA-----------------TGTATTTTCA----CAGGGTGATAGAGTTGTGTTATTTAGCCAATTTACCATGATGCTGGATATCTTAGAGGTTCTATTAAAACATCATCAGCATAGGTACCTCAGATTAGATGGAAAGACTCAGATTTCTGAAAGGTTGGTATAATTCATGTTAGTT chr4 + 94230402 38354703 38354702 38355874 38354703 38354702 38355874 1172 GTATATTGTATTATTTTCCTTCATTTTTGCCAATAGGAACCCACACATTGTGACGCTAATCCTGACCTTATCTTTGAAGATATGACAGTAATGACAGATTTTGAACTGCATTTGCTTTGTAAGCAATATTCTCATGTCAGTGACTTCAAGTTAGACATGGATCAGATTTTGGATTCGGGAAAGTTTAGAGTATTGGAACGCCTTCTATCTGACCTTAAAGAGAAGGTTTGTACTACAAATGGTTGAAGTGTCCTTTGCCATCTGCTTAATGGCTGGCACCAAAAAAACCTCACCATCTGGTCACAAGCAACTGTATGTGCTACTCAGTTGCTTTTGTGTGGAGTATTAGTGTGATTTAATGTATGTGCAGTGCAC-TGCTTTTAACATGTAGTCCTACTTCTGCACTTCGCTCTAT--------AGACAACAAGATTATACAGTGAAAGTAAGCTTCCTC---------GTTTTTCCAAGTGTTGAAT----ATTGTATCCCAAGTTAACATGACAATTAATAGGAAGGTGCAGTATCACTTTCACAGCTCATAAGTGTTGAATCATCTGACTTTCTTTTGGCCATTGAA-TAAGACTATTAATTTGGCTTAATACATGGTTGTTTTAACGTAAACATAAGATGTCACTGTTTTGAGTTATGAACACAAACTGGCTTATTCTGCAAATAAGCATGTAGCCAAATATTTCAACAGGGAG------ATATGGAAAACAGCTCAAATTTAACAGTTTTTAATGAAAATATTTTTAGAGATCTGTCATTCTTGCATTTGA------TTTGTGATTTCTAGGTTGCTTAATTGACCCAAGTACAAAATAA--CTAAAAGACTTCTGGCTCTTACTAAAGATGAA--TTAACACAACAGAAATACTGGACGTCTTTTACTAAAAGTCAGTCTGCATCTTAGTAATTTCA--GCTTAGTCTTTTAGTTTGGAAATCAGGGACTCTAAGATCAATTTTTAAATGCAAATAATACGTTTGTCTAGTTTGTCATCTTTAACTGAAGTGTTTTAAAACTTTTGTTTTGCTTTGTCATTTCCAGGGTGACAGAGTTGTGTTGTTTAGCCAGTTTACAATGGTACTGGATATCTTGGAAGTTTTCCTAAAACATTGGCAACACAGATATATTAGGTTGGATGGAAAAACGCAGATTTCTGACAGGTATGTGACTTTTCTGTTTGTT .....:...:..---..x:..::....x------.......:...........x.....:........x...............:x...x........:..:.....:...x.:........:..:..::xx..::.:.:.:....:x.............::x......:.....x.....:...x....x..:.:.:..x.::.:.....x:.x...x.....----...:..x...x.:x..:x..x..:....-:..:.x..:...x:..xxx..:xxxx...----:.x..::x.x....xxx.x:..:x..x::..x:.x:.xx..x..x..::xxx.x::..---:.:...:...x.------..x..-.x:.:..:..:.:.xx..:.:x..x:x:x...:x....:.--------......x..x.x..x.x...x--....::..x:x..---------.....xxx..:xx:.x...----...:.x..x:.:.------.......:x:..x.--x....---------....x.----..x...x..x..xx.:---...x.:.x..:.::...x..-...x:..::::x..-----------...xx..xxx..:.x....:x.:x:.x:....x..::x..-----x..:...x..---------------.......xx.:x...x..x..:.:..-----.------x....:...:x.:x.--........x...:....x:xx..x.:.xxx..xx.x..x.:.x:.:..x.x..:.------..xx.x..x.x....:...------------.:..x:.x...x--..xx::x.:.x...::.:x..:......x.x.--...x....:-....-------------...x..:x..:.:x:..x:...xx..xx.:.xx..--x..x.x.x...x.:::..----...:..--------------:...:.:.---.:...x...x..------...x::..:.:...:.x.x..:-----------------..:x..x...----........:...........:........:.....x...:.:...........:..:...:.x:........::x..:..:..:..:x.:..:..:........:..x...........x....xx..:xxx..:x....x... 12M3I13M6I191M4I28M1I29M4I58M3I12M6I5M1D40M8D21M2I13M9D19M4D13M6I14M2I5M9I6M4I16M3I20M1D14M11I40M5I10M15I26M5I1M6D15M2I55M6D19M12I12M2D32M2D9M1I4M13I35M2D18M4I6M14I8M3I12M6I22M17I10M4I144M 666/1007 66.1% 1172/94230402 0.0% 206/1007 20.5% 55925862 NA +14187 chr4 + 190214555 94283062 94283061 94283332 271 ATTTTAATTACATTATACAACTTTTTAGTGAGATTT--------------AACCTAATTTGTTTATCT--------TACAGGATTCATCTAATTGATGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTATCAACAAAAGCTGGTGGATTAGGAATAAATCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTATAATGACAAACAAGCAGAAGATAGATGCCATAGAGTAGGCCAGACTAAGTAAGTGTTTTTAGTTGGAATGTATTTTT chr4 + 94230402 38356549 38356548 38356841 38356549 38356548 38356841 293 ATCTTAACTTCTATATTCAACTCTGAAGCAAGAGTTTTCTTGTTTTCTAAGACCTGATGTATGTGTTCCTGTGTTCTGTAGGATACATTTAATAGATGAGTTCAATACAGATATGGATATATTTGTGTTCCTCCTGTCAACCAAAGCTGGTGGCTTGGGAATCAATCTGACCTCAGCAAATGTTGTTATTCTTCATGACATTGATTGCAATCCATACAATGATAAGCAAGCGGAAGATCGATGCCATAGAGTAGGTCAGACAAGGTAAGACTTCTTAATTATGATGCTTGTTT ..:....:.x.xx...x.....:.xx..::...x..--------------:....:..x.:.x.:.::--------.::.....x...:....x........:.....x...........x........:..x..:.....x...........x..:.....x........:.................x.....:..:.....:..:.....x..:.....:..:.....:......x................:.....x.:.....xx..:...:..:x:...:x.x... 36M14I18M8I217M 211/271 77.9% 293/94230402 0.0% 22/271 8.1% 55926513 NA +14196 chr4 + 190214555 94283062 94283061 94283332 271 ATTTTAATTACATTATACAACTTTTTAGTGAGATTT--------------AACCTAATTTGTTTATCT--------TACAGGATTCATCTAATTGATGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTATCAACAAAAGCTGGTGGATTAGGAATAAATCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTATAATGACAAACAAGCAGAAGATAGATGCCATAGAGTAGGCCAGACTAAGTAAGTGTTTTTAGTTGGAATGTATTTTT chr4 + 94230402 38357782 38357781 38358074 38357782 38357781 38358074 293 ATCTTAACTTCTATATTCAACTCTGAAGCAAGAGTTTTCTTGTTTTCTAAGACCTGATGTATGTGTTCCTGTGTTCTGTAGGATACATTTAATAGATGAGTTCAATACAGATATGGATATATTTGTGTTCCTCCTGTCAACCAAAGCTGGTGGCTTGGGAATCAATCTGACCTCGGCAAATGTTGTTATTCTTCACGACATTGATTGCAATCCATACAATGATAAGCAAGCGGAAGATCGATGCCATAGAGTAGGTCAGACAAGGTAAGACTTCTTAATTATGATGCTTGTTT ..:....:.x.xx...x.....:.xx..::...x..--------------:....:..x.:.x.:.::--------.::.....x...:....x........:.....x...........x........:..x..:.....x...........x..:.....x........:..:..............x........:.....:..:.....x..:.....:..:.....:......x................:.....x.:.....xx..:...:..:x:...:x.x... 36M14I18M8I217M 211/271 77.9% 293/94230402 0.0% 22/271 8.1% 55925280 NA +8455 chr4 + 190214555 94284940 94284939 94285095 156 TATTTTGTATTTTTTTTTAGAGAAGTACTAGTTATAAAACTAATAAGCCAAGGGACGATTGAAGAATCCATGCTAAAAATTAACCAACAGAAATTGAAACTAGAACAGGATATGACTACAGTAGATGAAGGTGAGTTGTTTGTAAGCAGAAACTTC chr4 + 94230402 38358607 38358606 38358759 38358607 38358606 38358759 153 TATTTTGTGCTTTTC---AGAGAAGTAAAAGTCATAAAGCTGATCAGTAAAGGGACTATTGAAGAATCCATGCTCAAAATGAACCAGCAGAAGTTGAAGTTAGAACAAGATATGACTGCAGCAGATTTGGGTAAGTCTCTTGCTAGTAATGATTTC ........::....:---.........xx...:.....:..:..x..:x.......x.................x.....x.....:.....:.....::.......:.........:...:....xx:...:...:x:...:x..:.:x:.:... 15M3D138M 118/153 77.1% 153/94230402 0.0% 3/153 2.0% 55926333 NA +8586 chr4 + 190214555 94284940 94284939 94285095 156 TATTTTGTATTTTTTTTTAGAGAAGTACTAGTTATAAAACTAATAAGCCAAGGGACGATTGAAGAATCCATGCTAAAAATTAACCAACAGAAATTGAAACTAGAACAGGATATGACTACAGTAGATGAAGGTGAGTTGTTTGTAAGCAGAAACTTC chr4 + 94230402 38357374 38357373 38357526 38357374 38357373 38357526 153 TATTTTGTGCTTTTC---AGAGAAGTAAAAGTCATAAAGCTGATCAGCAAAGGGACTATTGAAGAATCCATGCTCAAAATGAACCAGCAGAAGTTGAAGTTAGAACAAGATATGACTGCAGCAGATTTGGGTAAGTCTCTTGCTAGTAATGATTTC ........::....:---.........xx...:.....:..:..x...x.......x.................x.....x.....:.....:.....::.......:.........:...:....xx:...:...:x:...:x..:.:x:.:... 15M3D138M 119/153 77.8% 153/94230402 0.0% 3/153 2.0% 55927566 NA +19663 chr4 + 190214555 94289415 94289414 94290045 631 ATTTTTTTTTAAGTAAAATATTTTTATAAAG---------CTTTTAATGCTACTTTCTGACCTACAGGTGATGAAGGGAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGAAATAAGAAC-TGTGAACTCTCAATTGATGAGGAAATATCAACTTGGTGCACTCAAGGACATTTACATTAT-GATGACCATGGGGTTTATGAACATTTATAACTTTTTATAATTTCCATATTACATTTCTCATAGTATGGACAACTTTTTGCCACTAACTGAATTCTCCAAATACTCACACGTGAAATTTCAAAAAAGAAGCCACAAATATGTAGTTCTGAAGATGTTGAATAATCATTTTACAAAGCAGTTTTCTGAATGGGGAT-TAGTTGGTGATTGTTTGTAACAAATATGCTAATGCTTTAGAAATGTCAGTATTTTTGTAATTATTTCTACCTCCAAA--TATATATATATTGTC--TTTCACTGGATAATGTGTGTAGAT---TTTTACATGTGCCTTATTTGACAATGCTTATGTCTTGTTTTTGCTTGT-----CTCATTTGAAGTTCTTTTTTA---TTATGTTAA------AGAATGCAGCTGTATAGATTATATA---GCTTTCATTTTATTGCTATTTGAAGCAGA chr4 + 94230402 38358785 38358784 38359426 38358785 38358784 38359426 642 ATTTTTATTCCAAAAAACTGCACTCATAATGAAGATTGCTCTACTAATGTATGTTTTTATTCTTCAGGAGAAGAAGGGGCCATTCCAGCAGATATAGCCACGTTATTGAAAGCCTCATTAGGTCTCTAAAATGTAAATATGTGGAAT-----TTAAGGAAGAAATGTAATGCCATGCCCCCCAGGGACTCTTATGTTATTGATGGCCATGAGTTTTTTGAAGTTTTATAACTTTTTGTAGTTTCTTCATTTTATTGCTCATGGTATTGACAA-TTTTTAACACTGGTAGCATTCTTTCGATGCT------TGAAAACATAAACAG-----TACCAACATCAGATGCTGAAGA------AACATTATTTTACAGGACGTTTTTCAAAATGGGGACCTATGTAGTAATTGTTT-TAACAAATCTGCTACTGCTTAAGATTTGTCAGTATTTTTGTAATTATTTCTACCTCCAGACGTATAAATAAACTGTCTGTTTCACTGGATTATGCTTGTAGATTTCTTTTATATGTGCCTTATTTGACAATGCTTAAGTC-TGTTTCTGCTTGTTCTGGTTCATTTGATGTACTGTCTTGGTTTTGTATCAATTTGTTCAAATAAAATTCCATACATTATCAGGATGTTCTCATGTTGTGGTTACTGGGAGAGGA ......x..:x.:x...x.::x:.:....x.---------..x:.....:xxx...:.:x:..x....x..x......:x:..x.................:...:.:...:.x...x.:..:..x.:....:x:..:-....:.x.-----..:.x..:.....:.x.xx:::xxx.x.:..:....x:...::....-....:.....:.x...x....xx.............:..:....:x:...x:...x.....:....x.....-.....:x....:::x.x.....::x:..:..------.....x:x:...x.:-----:..x..:..xx::.x.......------.xx..:........:::.:x.....x:........:-..xx.:..:.......-........x.....x.....x...xx................................:.--....x...x.:....--...........x...:x.......---.....:........................x...-.....:.......-----:........x..x..x.:..:---..:.:.:..------x:...:x.::.x:...x.....xx:---.:.:....x..:.x.:..:.x.:..x:.. 31M9I98M1I8M5D47M1I72M1D31M6D15M5D22M6D36M1I16M1D60M2I15M2I24M3I34M1D13M5I21M3I9M6I25M3I29M 437/606 72.1% 642/94230402 0.0% 61/606 10.1% 55930630 NA +3096 chr4 + 190214555 94293225 94293224 94293286 62 TGTTGTCTTATTGTTGAGTTTTATGAGTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 37981902 37981901 37981963 37981902 37981901 37981963 62 TATTCTATCTTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTG .:..x.x.:x............xxxx...x.......:...............x...x.x.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 56311323 NA +6497 chr4 + 190214555 94299480 94299479 94299663 184 CTAGAGTTTGGTTTGGGGCCTTCGTTTTATCCAGTTAGCGACGGCAGGAATGGCTTGGACTTTCTTCCGTAAAGTCACCAGCCTTGGATGGTTGTCTAACAGGTCAGGCTTAAAGACCAAAAGTGTGGTACTGCAAATCTCCCAGTAGAAGTCTGCCCAAGTTACCTAGTTTAAAGGAAACAAA chr4 + 94230402 38364453 38364452 38364636 38364453 38364452 38364636 184 CTAAATTGCTGTCTTTGGTCTTTTCTGGATCCAGGCTGCAATAGCGGGCAGTGCTTCCACTCTGTCCCTGAGAGCCAACAGCCTGGGGTACTTGTCTGCCAGGTCAGCTTTGTAGGACAGGAGCGTTGTGCTGCACACATCCCAGTAGAAATCAGCCCATGTTACCTGGTGGAAAGAGGGAAAA ...:.x.x:x..:.xx..:...:x:.xx......x:x..:.::..:..x.xx....xx...:.x.:..xx.:..:..x......x..:.:x......:x........x:..:x..:x..::..:..x..:.....x.:x...........:..x.....x.......:..xx....::::x... 184M 119/184 64.7% 184/94230402 0.0% 0/184 0.0% 55935027 NA +6497 chr4 + 190214555 94299480 94299479 94299663 184 CTAGAGTTTGGTTTGGGGCCTTCGTTTTATCCAGTTAGCGACGGCAGGAATGGCTTGGACTTTCTTCCGTAAAGTCACCAGCCTTGGATGGTTGTCTAACAGGTCAGGCTTAAAGACCAAAAGTGTGGTACTGCAAATCTCCCAGTAGAAGTCTGCCCAAGTTACCTAGTTTAAAGGAAACAAA chr4 + 94230402 38362245 38362244 38362428 38362245 38362244 38362428 184 CTAAATTGCTGTCTTTGGTCTTTTCTGGATCCAGGCTGCAATAGCGGGCAGTGCTTCCACTCTGTCCCTGAGAGCCAACAGCCTGGGGTACTTGTCTGCCAGGTCAGCTTTGTAGGACAGGAGCGTTGTGCTGCACACATCCCAGTAGAAATCAGCCCATGTTACCTGGTGGAAAGAGGGAAAA ...:.x.x:x..:.xx..:...:x:.xx......x:x..:.::..:..x.xx....xx...:.x.:..xx.:..:..x......x..:.:x......:x........x:..:x..:x..::..:..x..:.....x.:x...........:..x.....x.......:..xx....::::x... 184M 119/184 64.7% 184/94230402 0.0% 0/184 0.0% 55937235 NA +5351 chr4 + 190214555 94308630 94308629 94308747 118 TTACTTTCACATCTTGCTTTTTCTCTGCCCAAGGAAAACATGACATGAAATCATCCAGAGTGTCCACAATAGCATCAAC--ATGACATTGTTCCATTTCTGTGTTTCCAGCCAAATCTGT chr4 + 94230402 38367837 38367836 38367954 38367837 38367836 38367954 118 TTACCTTCACATCCTGATTTTTCTCTGCCCAGGGGAACAGCATCATGAAATCATCAATGGTGTCCACAATGGCATCAGCCAATGCC--TGCTCCACTGGAGTCTGACCTGCCAGACCTGT ....:........:..x..............:..:..xx:::x............x.x:...........:......:.--...x.--..:....:.xxx..x.xx..x....:.:.... 79M2I5M2D32M 88/116 75.9% 118/94230402 0.0% 4/116 3.4% 55940793 NA +6222 chr4 + 190214555 94317868 94317867 94318008 141 GTTACCTGTGTTTTTGGTCAAATATCTTGCTATTGCTAGGCTCTGGTGAAGAGTAAGTCCATCAACTTCCAAAATGGGGATTTTTCCAAATGGGAGAGCTTAAAATGAAATGAGCAAATAATTAACTTCATAACAAAACCA chr4 + 94230402 38369975 38369974 38370109 38369975 38369974 38370109 135 GTTACCTGATTCTCTGGCGAGGTATCTCGCAATTGCTAGGCTCTGGTGAATGATCACTCCATCTACTTCCAGAATAGGAACTTTGCCAAATGGGATAGCTTGGAGGGAAGAAAAGAAAGAAATCA------AATAAAATCA ........xx.:.:...:x.::.....:..x...................x::.x.x......x.......:...:..:.:...x..........x.....::.:x...:x:.:x...x..x.x.------..:....:.. 125M6D10M 99/135 73.3% 135/94230402 0.0% 6/135 4.4% 55947893 NA +8272 chr4 + 190214555 94334482 94334481 94334650 169 ATTTTTGCTACTTACTTGATTTGATTTCAGGCCAGTCAGCTTGTTCTATTCTGTGGTCTTCATACTGTATGTCCAAATAAGCAAATATGTAACGAATAATTTCTGCTCTCCCCCTCATATTAAAATAAGTGAGTTTGTAGTTTGGCATGGTGCAATTCTGGAAAAAGAA chr4 + 94230402 38379010 38379009 38379177 38379010 38379009 38379177 168 ATCTGCATTACTTACTTGGTTTAATTTTGGGCCAGTCTGCTCCTTCCAACCTGTGGTCTTCATACTTTATGCCTGCATAGGCAAACAGGTAGCGGCAGATTTCTGCTCTTCCTCGCAGATTGAAGTACGTCAGCTTGTAGTTGGGCATGCTG-GGTCCCTGAAAGGGAA ..:.x:::..........:...:....::........x...:x...:.x:................x....:.::x...:.....:.x...:..:xx:...........:..:.x..x...:..:..x..x..:........x......x..-::.:.:x....::... 152M1D16M 122/168 72.6% 168/94230402 0.0% 1/168 0.6% 55955472 NA +3108 chr4 + 190214555 94340257 94340256 94340348 92 AAACCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72471337 72471336 72471428 72471337 72471336 72471428 92 AAACGTTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTT ....x..x:...:.:....x.xxx:......::xxx:..::.x.:.x....:...:.....:....:........:..xx:.x:x.:..... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 21868920 NA +3042 chr4 + 190214555 94340258 94340257 94340353 96 AACCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 91132723 91132722 91132818 91132723 91132722 91132818 96 AACCCTCCTTTCTCAGCTTTTTTTTCCTCCTCTTTCTGGTTGTCTCTGTGAAGATGTGTTTATCTCTTTATCAATTTTCTTCTTTTTTTTTTTTTT ....:.:......:xx:..:...:.:::::.......xx:.x...:.x.xxxxx.x.x...x.:.:...x.:xx....:..:.............. 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 3207535 NA +3070 chr4 + 190214555 94340280 94340279 94340349 70 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 58577649 58577648 58577718 58577649 58577648 58577718 70 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT .....:...:.::.:x..x.x:....x..:x...::x.x:........::..........x...x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 35762631 NA +3138 chr4 + 190214555 94340281 94340280 94340354 74 CTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTCTTTTTTTTTTTTTTT-------TTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 48601703 48601702 48601784 48601703 48601702 48601784 82 CTTTTCTTCATCCTTTGATTCTTCCAGTTCTCTTTTTCCCTTTATTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCT ....::...x.:....xx.....:.-x..........:::...x...-------...:..........::.x........:. 25M1I21M7I28M 57/74 77.0% 82/94230402 0.0% 8/74 10.8% 45738578 NA +3282 chr4 + 190214555 94340637 94340636 94340679 43 CCCGCCCCCCTCCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 5672119 5672118 5672161 5672119 5672118 5672161 43 CCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTTGAGA ...x......x....................x.:......... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 88668518 NA +3757 chr4 + 190214555 94355429 94355428 94355493 65 GTGGCGCATGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....:...:.--......:...........:.........x.xx.x...x.:...........:. 10M2D53M 52/63 82.5% 63/94230402 0.0% 2/63 3.2% 18322228 NA +3024 chr4 + 190214555 94374510 94374509 94374555 46 TTTCCCTAATTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAC chr4 + 94230402 87791852 87791851 87791897 87791852 87791851 87791897 46 TCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGAC .:.....xx......:............::.....:.....x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 6582658 NA +3008 chr4 + 190214555 94406453 94406452 94406494 42 AAAAAAAAAATATATATATATATATATACACACACACACACA chr4 + 94230402 74671066 74671065 74671107 74671066 74671065 74671107 42 AAAAATTAGCTGTATATATATATATATACACACACACACACA .....xx.:x.:.............................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 19735387 NA +3359 chr4 + 190214555 94406467 94406466 94406557 91 TATATATATATATACACACACACACACACACACACACACATATATATATGTATATATATATAATTACTCTTTGACCTTGATGGGAAAAGAT chr4 + 94230402 89823932 89823931 89824022 89823932 89823931 89824022 91 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCCCATGAGAAAAAAT .......:x...:................x:.:.xx:.:.....::...x:xx.xx.....:x..x:x.:.::.:.::x...:.....:.. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 4582535 NA +3299 chr4 + 190214555 94427134 94427133 94427203 70 CATAGTGGCACACACCTGTAGCCCCAGCTACTTGGGAGGCTGAGGTTGGAGGACTGCTTGAGCCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....::...:--.....::...........::........x::x.x.:.x::.....:.....:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 18393937 NA +3036 chr4 + 190214555 94433198 94433197 94433270 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGTTGAGGTGGGAGGATTGCTTGAGCCTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::...:....x:xx.x.:.x::.....:..::.:..x.xx:.....:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 18399993 NA +3194 chr4 + 190214555 94445487 94445486 94445565 79 GTGGCACGTGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::.::..--...:.:...........::........x.xx.x...x::........::.:..x.xx:..:..:.. 11M2D66M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 18412286 NA +7861 chr4 + 190214555 94455231 94455230 94455390 160 TGATTTTCTTTCACAGCATATTTCATTTTCTGTCATTGGA-CTTTGAGCCATTAGAACCATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAACATGCCTCTGACAATCTCTAGTGTAAGT chr4 + 94230402 59772108 59772107 59772265 59772108 59772107 59772265 158 TGATTCTCTTCTGCAG---GCATCAAGTCCTTGGCTTGGATCCTTGAATACTGAACACCATGAGCAACTACAGCGTGTCTCTGGTCGGCCCGGCTCCTTGGGGTTTCAGGCTTCAAGGTGGCAAGGATTTCAACATGCCCCTGTCCATCTCTCGGGTGAGT .....:....:::...---::x...xx.:..xxxx.....-.:....::xx.x.:x.................:.....x.....:.....:...............x....x..:..:..:.................:...x.x......x.x..:... 16M3D21M1I120M 120/157 76.4% 158/94230402 0.0% 4/157 2.5% 34683123 NA +3417 chr4 + 190214555 94464035 94464034 94464133 99 AAAAAGAGTAAGGAT-GCCAGGGATATTTATATTTTTTTGTAGTAAAGATGAGGAAAGGAGGAATTTCTCTTTAGTGTGTTGCTGTAAATGTTAAATATG chr4 + 94230402 34662510 34662509 34662609 34662510 34662509 34662609 100 AAAAAGAGCAAGGATAGTTGTTTTTATTTTTATTTTTTTGATGCAAAGATTGAAAAACTAGAAATGTCTCTTTTGAATGCTGACATACATTTCAGATGTG ........:......-.:::xxxx.....x..........xx.:......x:::...xx..:...x.......x.x:..:..x::..x..x.:.:..:.. 15M1I84M 67/99 67.7% 100/94230402 0.0% 1/99 1.0% 59801525 NA +3022 chr4 + 190214555 94469933 94469932 94469985 53 ATATTTTTCCTATTTTGCATTCTTTTAATTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 73093377 73093376 73093429 73093377 73093376 73093429 53 ATATTTATCCTATTAAAAATTCTGTACATTCTCTTTTTTTTTTTTTTTTTTTG ......x.......xx:x.....x.xx...:.:.................... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 21376556 NA +3475 chr4 + 190214555 94478803 94478802 94478919 117 TTTAAGACAGTGCTGTTTTTCATTAAAATTATTTTTTTGGTTTAAATGAATTTGGGTTCTATCCAAAAGAAGGTAGGTGTGCTTGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 64262305 64262304 64262403 64262305 64262304 64262403 99 TTTTAGAAAATAGTGTTACTTCTTAAACTTTTTTTCT------------------GCTTCACTGACAAAAAAGTGTATGTGCTTAGTTTTTTTGGTTTTTTTTTTTTTTTTTTCTAA ...x...x.:.:x....x:.:x.....x..x....:.------------------.:.::.::x.x..:..:..:x:.......:..x.....xx..................:... 37M18D62M 70/99 70.7% 99/94230402 0.0% 18/99 18.2% 30216498 NA +3576 chr4 + 190214555 94482758 94482757 94482828 71 GTGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGGGCCCAGGGGGTCAAGGCTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x.:....:.........::::........x.xx.x...x......::.....::.x.:x:..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 18449554 NA +3651 chr4 + 190214555 94502747 94502746 94502837 91 TGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGTCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x....:.:.........:.::........x.xx.x...x::...........:..x:xx:..:..:..------..x..x...... 73M6D12M 62/85 72.9% 85/94230402 0.0% 6/85 7.1% 18469542 NA +10063 chr4 + 190214555 94523717 94523716 94523893 177 ATTACAGCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGGTTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACAGGCTCTTTGAATATGACTCTGCAAAGGTAAGT-TGCTTTTTGTTT chr4 + 94230402 59805159 59805158 59805336 59805159 59805158 59805336 178 ATTTCAGCTTAACGACGGTGGAAAAGCAGCCCGAGCAAACGTGGGGATTGGTGACGTGGTTCTCACCATTGATGGGATAAGTACAGACGGGATGACTCATCTAGAAGCACAAAACAAGATCAAGGCATGTACAGGCAATCTGAACATGACTTTGCAAAGGTAAGGAGGCtttttcttt ...x.....x..x..:..:..x..:.......::.....:..::.:..x..:..:..........x.........:....:.:..x.x..:...........x.....x..:..:.....:....xx.........xx.:....:......:............x-x.......x... 165M1I12M 139/177 78.5% 178/94230402 0.0% 1/177 0.6% 34718558 NA +3599 chr4 + 190214555 94531536 94531535 94531647 112 AAAAACCTCATAATGTTTTAAGAAAGTTTACAAATTTGTGTTGGGCTGCATTCAAAGCCATCCTGGGCCACATGCAGCCTGTGGGCCGTGGGTTGGACAAGCCTGGCCTAGA chr4 + 94230402 18433764 18433763 18433872 18433764 18433763 18433872 109 AAAAATCACATAGTAATGCTAGAA-GTGTGTGACCTTGTG--GGGTCACATTACTGGCTGTCTAGGGCTGCATGCAGCTCGTGGGCCCTGGGTTGGATACATGTGCCCTAAA .....:.x....:.:x.x:x....-..x.:::.x:.....--...:::....xxx:..::..:x....::........::.......x.........:.x::x..x....:. 24M1D15M2D70M 72/109 66.1% 109/94230402 0.0% 3/109 2.8% 76097772 NA +3481 chr4 + 190214555 94542175 94542174 94542254 80 AGTGGCACACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....::...:.--...:.:...........::........x.x..x...x::........::.:..x:xx:..:..:.. 12M2D66M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% 18508975 NA +3116 chr4 + 190214555 94574961 94574960 94575081 121 AAGAAAGGATTTTGTTTTATTTGCTTTTTTAAAGTTTTTTTTTTTTTTTCAAATTCTTTAAGATTAT-TAATTAGAGTTTGCACATTCCTGAGTTAGGTGAA----AATTATCTTATTCCCTGTGT chr4 + 94230402 6948994 6948993 6949103 6948994 6948993 6949103 110 AAGAATGTGTTTTGTTGTTTTTTTTTTTTTAAAGTTGTCCTTCTTCATACATATACTTAAAGATTATGTGA----------------CCTGGTCTAAGCAAATGTGTATTATTGTATTCCCTCTGT .....x.x:.......x.x...x:............x.::..:..:x.x..x..x...x........-.:.----------------....:x:..:.::..----x.....:x........x... 67M1I3M16D15M4I20M 77/105 73.3% 110/94230402 0.0% 21/105 20.0% 87625967 NA +22849 chr4 + 190214555 94575567 94575566 94576042 476 TGCATGTGTTTGGTGTGGTTTTGTGTATGT----------TTATTTTTGTTTTACATAGGGAGAACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGGCCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCTGCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCTGTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTAAAACTGCAGTTAATGTCCCACGGCAGCC-------CACAGT-CACCAGCGTGTGTTC-------CGAGACTTCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATC---------CCAGGGTGACAGTAAACAGCAAAATGGGTAGGTGG chr4 + 94230402 59831090 59831089 59831572 59831090 59831089 59831572 483 TGCATGTGGTTTGTGTGGTTTTGTGTGTTTCTTTTTTTTTTTTTTTTTATCTTGCATAGGAAGAACCTAAAGAAGTAGTTAAGCCTGTGCCCGTTGCCTCTGCTGCTGCACCCAAAGTCACTGCCATGGCCAGTGTGGCTTACAATAAGACCCCGAGGCCATTCGGAGCTGTGGCCTCCTCAAAAGTCACCTCCATCCCGTCACCATCCTCTGCCTTCACCCCAGCTCAGGCGG-CACC------CATGCTTCC--------------------CACCCCAGCCCCATTTGCTGCACCAGGACTGCATGTTAACGCCAAGCCTAATGCTGATGGGTGGCCGCCCGCGCCGAGCACTGCTAAACCTGCCGTTAATGTCCCACGGCAGCCTGCCACGCACAATGCCGCCCCGGGCGGCCATGTCGGCGACAGCACCCAGGAGCTAGCGGAGGGGCTGCGACGAGGATTCAGAGAGAACCAGGGTGACAATAAACAGCAAAATGGGTAGGTGG ........x..x..............:.x.----------..x.....:.:..:......:.....................:.........:..:.x...x......:::...........x...:::x..:::....:.........:.x..:x....x..:..xx.....x.:..x:..........x........:........x.................:..x...:-....------.........--------------------...:..xx...::..:......:.x..........:...:.....x.:..:......:x:..xx..::.:..:.:....:...x....x....x....................-------....:.-.xx.xx..x.:.x:.-------...x.x:x.:...........:.....:.x.x..x......:---------...........:....................... 30M10I194M1D4M6D9M20D114M7I6M1I15M7I42M9I35M 357/449 79.5% 483/94230402 0.0% 61/449 13.6% 34744477 NA +5423 chr4 + 190214555 94584892 94584891 94585118 227 TTTCTAGTTGTTTTCTTTTTTTCTTATCATTTTCCTTTCCTTTTTCTTCATGTT-------GGAAATCTTTCTTCTGCTGCCTTCCTCTGTCAATTAAAAGGAAAATCCCACCTAAACGGTAATCTTTCTGTTGAATACATTCTAATAGCATTATTTTATATTAACATTATAAGTGCAGTTTTTTACTTATAATTTAAAAGGTTTTTTTGTTTTGTTTTTTTGTGAAACAGAGT chr4 + 94230402 59835420 59835419 59835609 59835420 59835419 59835609 190 TTTCAAACTTCTTACTTTATTTCTTGT---TTTCTCTTTTCTCTTTTTCCTGTTTACACTGGGAAAACTTTTTCTTGCTGTGTTATTCTGTCATCTCCAAGGAAAATCCCACCCAAACGGTAAATGTTTAAATATGTACGTCTTGATAATACTGTCTT-----------------------------TTACAGTTTCAAATGTTTTTGTA------------ATGAAACAGAGT ....x.::.x:..x....x......:.---....::..:::.:..:...x....-------.....x....:.::.....:x..x:.......x:.xx...............:.........x:x..:x:x.:x:...:.::.:...::.:.:.:..-----------------------------...:.:...x...x......x.:------------:........... 27M3D24M7I97M29D23M12D12M 128/183 69.9% 190/94230402 0.0% 51/183 27.9% 34749472 NA +12018 chr4 + 190214555 94585542 94585541 94585743 202 TTTTTTTTTCTCCTTAACCCTAGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTGTAAGT chr4 + 94230402 59835802 59835801 59836002 59835802 59835801 59836002 201 TTCTCTTTTCTCTTCGACAC-AGCCCCCCACGAAAGCATATTGTGGATACCTATACGGAGTTCTACCACACCCCTACTCACAGCGATGCCAGCAAGAAGCGGCTGATTGAAGATACTGAAGACTGGCATCCCCGGACAGGCACCACCCAGTCACGCTCTTTTCGCATCCTTGCTCAGATCACCGGCACTGATCATAGTGAGT ..:.:.......:.::..x.-.....x...x....:..:........xxx......:.....:..:..:::x..:........:...............x.:........:................:...xx....x..x..x..:.....x........:..x........:........:..x.....x...x..:... 20M1D181M 160/201 79.6% 201/94230402 0.0% 1/201 0.5% 34749740 NA +14878 chr4 + 190214555 94586897 94586896 94587294 398 TGCATGATGGAATTAGTCTAGAACCTTTTTCCTT---CTATTTCTTATGACTCTTCTATCACTCTTTTTTTTTTTTTTTTTTTGTATTTCCACAGGGAAAAGATACCCCTTCACGTCTTTAGTCCCAAATACACAAAATTACGTGACTGGCACCATGAAGTTTCAGCACGTGCTCTTAACGTACAGTGATTTATGAGCCTTGCCCCCCAAGCA----GCCAGCACATACCTTTTCATTTACTTTTTTTTTTTCAACTTCATAGCAAAAT-----CTGTATTAAATTTGCCTTAT-----GAAAAAATAGAACTTTTTCTATACTTTTCTAACAATTTCCTATTGTTGTGAGAAAAGGAAGATGAACATG-TTTTGTGCTAGTTGGTAGCTCACAAATGTAAAACCAAAAAAAAAAA chr4 + 94230402 59838954 59838953 59839335 59838954 59838953 59839335 382 TGTGCAATGGCATTAGAC--AAActttctttctttctctttttcttatttctcttctgtcact---------------------tctttcCACAGGGAAAAGCTTCCCATCCACGTCTTTAGCCCCAAATATACAAAATTACGTGACTGGCACCACGAAGTCTCAGCACGTGTTCTTAATGTCCAGTGATT--TTACCCAAGTTGCAAAAGCAAAATGCAAACACTTCCTTTCTTCTTTTCCATCTGCTTTGCAAATATAAAATAAAATAGAAAATGTATTTCATTAGCCTCACTAAGAGAGAAATTCTAGCCTTTTCTATACTTTTCTAACACTTTCCTACTGATGTATAAAAACTGAGATGAAGATGTTTTTGTGCTAGTCACTAGTTGACAAA---------AAAAAAAAAAA ..::::....x.....x.--:...:..:..:...---..x........xx.......:.....---------------------.x................x.x...x.:...........:........:.......................:.....:..........:......:..x........--.x.x..xx.::x.xx.....----..x.:...x.x.:..:.:x...x.:x.:.x:...x...x.x:.x.::.....-----x......xx...x....:.:-----..:...x.xx.:.:....................x.......:..x...:x:....xx:.......x...-............::x...:.x.....---------........... 18M2D14M3I26M21D107M2D20M4I52M5I20M5I70M1I26M9D11M 281/364 77.2% 382/94230402 0.0% 52/364 14.3% 34747943 NA +3108 chr4 + 190214555 94586925 94586924 94586998 74 TTCCTTCTATTTCTTA-TGACTCTTCTATCACTCTTTTTTTTTTTTTTTTTTTGTATTTCCACAGGGAAAAGATA chr4 + 94230402 37743678 37743677 37743751 37743678 37743677 37743751 74 TTCCATCTTTTTTGTAGTGGATATTTT-TCACTCTTTTTTTTTTTTTCTTTATTTTTCTCCATGGGAAAAAAATA ....x...x...:x..-..:x.x..:.-...................:...x.x.x.:....::..:....:... 16M1I10M1D47M 56/73 76.7% 74/94230402 0.0% 2/73 2.7% 56843247 NA +3239 chr4 + 190214555 94586949 94586948 94587016 68 CTATCACTCTTTTTTTTTTTTTTTTTTTGTATTTCCACAGGGAAAAGATACCCCTTCACGTCTTTAGT chr4 + 94230402 52687779 52687778 52687845 52687779 52687778 52687845 67 CCATTGCTTTTTTCATTTTTTTTTTTTT-TATTTTCAGAGGAAAAAAAAACCCACACGTGTCTTTAAT .:..::..:....:x.............-.....:..x...:....:.x....x:x.::.......:. 28M1D39M 50/67 74.6% 67/94230402 0.0% 1/67 1.5% 41899170 NA +6497 chr4 + 190214555 94608039 94608038 94608187 149 TTTTACTTCTGAAAACTTAGGTTTGACAGTGCTCTGGAAGACCTACCTAAGAGTGGACCTCACCCTCCTGCAACTCCTCAGGTGTTAACTATTGGTAGCCAAGTGGCCACACTTTCTAAAGTAGCAACTACTTATTCTAGGTAGACTCT chr4 + 94230402 59845917 59845916 59846062 59845917 59845916 59846062 146 TTTTACTTCAGAGGACTTTTGTTTGAGAAT-CACTGGGGGCCTTACTCAAGTGTGAACTTCATCCCCTTACAAC--ATCAGGTTTTAAACACCAGCAGCCAAGTAGCCACAGTGTCTAAAGTGACATCTCCTTACACTAGGTAGAGTTT .........x..::....xx......x.:.-.x....::.x.:...::...x...:..:...:..:.:.:....--x......x....x:.:::.:........:......x.x........::..x..x....:x.........x.:. 30M1D43M2D73M 106/146 72.6% 146/94230402 0.0% 3/146 2.1% 34762122 NA +3683 chr4 + 190214555 94620931 94620930 94621031 101 CGTGGTGGTGGGCACCTATAGTCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGAAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::......--...x.:....:.:.......::::........x.xx.x...x.............:..x:xx:..:..:..------..x...:..... 10M2D71M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 18587734 NA +3138 chr4 + 190214555 94622602 94622601 94622719 118 CATTTTTGTGAGCCTTTTCCCTCTCTCCCTCCCTCCTTCCCTCCCTCTCTCCCTCCCTCCCTCCTTCTCACCTTTCCCTCCTTCCTTCCCTTCCTCCCTCACTCTGTCGCCCAGGCTG chr4 + 94230402 33999256 33999255 33999373 33999256 33999255 33999373 118 CATTTATATGCAAATTACTTCTCTCATCTGTTTCCCTGAGCTATCTCGTCTTGTTCCTCCCTCCCACTCCCACTTCTCACCTCCCCTCCCTTCCCACTGCACTTCGCTAGCCAAGTTG .....x.:..x:xx..x:::.....x:.:x::::...xxx..x:...x::::x.:.........:x...x.x:...:.x...:..:........:x.:x....::.:::x...:.:.. 118M 67/118 56.8% 118/94230402 0.0% 0/118 0.0% 60623346 NA +8982 chr4 + 190214555 94629536 94629535 94629813 278 TTTTGGTTATGTGTGATATAAGAAATTAAAAAGAGAAA---TGAACATAATCCAAGTCCCCACACTCACTTTAATTAA-GATATTGTAGATCCAGTTTAATCTGCGTTCTTAAAGTTGAAAGGCTGGTTGCTAATGGAAGAAGCTAGCCTCCTGAAGATGTGGAAATATTTGATACTTAGACTTGGGTGCACCTGTTCCAGTGCTTTATAGCAAACATACCAGCATTCTCCACTGCTTAGAGAAATGGTAATAGTTTAATCTGTCCAATT-TGCTTTTAATCA chr4 + 94230402 59866691 59866690 59866970 59866691 59866690 59866970 280 TTGTGACGGTATGTGATGTAACAAATCACAAGGAGACACGCTGAGCA-AGCCAAAACCACCATACTCATTTTAATTAAAGATCCTTTACAGCTAATTTAGTCGGAACCTTTGCAGTTGAAAGGCTGGTCGCTAGCACAGGAA-CTGGCC-CCTGGAGTTGCAGAGGTTGTTGAAATTGGGTCCCACTCGCACCTGTTGTGATTTTCCACGGAGCACATACCATCCTTCACCAGCATTTAAAGAAATGATAATGGTTTAATCCTTCCTGTTCTGCCTTTAATCA ..x..::x:.:......:...x....:.x..:....x.---...:..-.::.x..::.x...:.....:.........-...x:.x..x.x.:.:....:..x.x::::..:x...............:....:::x.:...-..:...-....:..x..::..::.xx....x.:.x:.x.:::xx:.........x:::.x:.::.::.x:x........x.x...x...x:::...:.......:....:........:x...x:..-...:........ 38M3I6M1D30M1I63M1D6M1D120M1I12M 184/275 66.9% 280/94230402 0.0% 8/275 2.9% 34762845 NA +10960 chr4 + 190214555 94651002 94651001 94651275 274 TTCCACTCTGCAGTTATCTAGGCCTGTCATTCCTGTTCACAAATGG----AAACCCAATCCTACCTGGAACAAGAAGAACTTCTTTAGTGTTAATCCTGTGTTAATGAATTTGTTAAATTAGTCTTTGCTGACACAGAG--AAGAAAACACTTTGCTATATGTGAAAGATTAATTTTATTGTTTAATCTGTGCATAATTTCAAGGGCATTGATGGAGAAAGATGCTCTTTCAGGACAGCCAAGAAGTATCAAGTTAGGCCAGTAGTTGCCCTGAGCATGC chr4 + 94230402 59876332 59876331 59876603 59876332 59876331 59876603 272 TTCCATTTCATAACTAACCAGGCCTATCATTGCAG--CGCAGATGGCCAGAAACTCAATCCTGCCTGTAGCAGAGAGAGCCTCTTCAGTATCAGTCCCTTCTTAATGAATCTGTTAAATTAGCCTGTGCTGACACTGCACCAGGAGAGTGCTTTGTTGTACACAAGG----ACTTGTATTGTTTGATCGGTACATAACTGAAAGGGCACTGATGTAGAAAGGTG--CTTGTATGGCAGCAGGAGGGTATCAGGTTAGGTCAGTGTTTGCACTGTTCAGGC .....:.::::.::..x.:......:.....x.x.--.:..:....----....:.......:....x.:..:::...:.:....:...:.:.:...:x.x.........:...........:..x.........x.x:--.:..:.:::.....:.:..::::.::----.x..x........:...x..:.....:.xx.......:.....x......:..--...x:.x.:....x:::::......:......:....:x....x...xx..x.. 35M2D9M4I89M2I26M4D53M2D54M 188/266 70.7% 272/94230402 0.0% 14/266 5.3% 34774670 NA +13296 chr4 + 190214555 94654443 94654442 94654646 204 TCTTTTTCTTCTG-TCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAGTAAGT chr4 + 94230402 59878012 59878011 59878216 59878012 59878011 59878216 205 TCTTTTCTTCCTAACCAGGGGACCTTTCTTGGTGGCCTTGGGGAAGTCATGGCACCCAGAGGAATTTAACTGTGCTCACTGCAAAACTTCCATGGCTTACATTGGATTTGTGGAAGAGAAAGGGGCTCTGTATTGTGAGGTCTGCTATGAGAAGTTCTTTGCACCTGAGTGTTCCAAGTGCCAGCGGAAGATCCTTGGAGTAAGT ......::.:..:-:...:.....x.....:.....x:.......:..x...........:.....:.....:.............x.x.x.....:..............:..:........:..:............x.x...........:........x.....:...xx:x::.....:x.................... 13M1I191M 168/204 82.4% 205/94230402 0.0% 1/204 0.5% 34776431 NA +9115 chr4 + 190214555 94657423 94657422 94657553 131 ACAGGAAGTCATCAGTGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGGTAAGA chr4 + 94230402 59879218 59879217 59879348 59879218 59879217 59879348 131 ACAGGAAGTAATAAATGCTTTGAAACAAACTTGGCATGTTTCCTGCTTCGTGTGTGTGGCCTGTCATAACCCCATCCGCAATAATGTCTTCCACTTAGAAGATGGTGATCCCTACTGTGAGACGGGTAAGA .........x..x.:...x..........................:..:........:......x:x..x.....:..x..:.....:..:.....:..:........x..............x....... 131M 111/131 84.7% 131/94230402 0.0% 0/131 0.0% 34778205 NA +11810 chr4 + 190214555 94662376 94662375 94662703 328 ACTTCATCATGTTTAAATTATGTCTCTCTGCCCTCCCTTAATACAGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTCAGTAAGTAGAG---TCTTATTTCCTAATTAAAGGGGT-ATAGTATGGCCAATTCTAGCTTTAGTATTTAATGGAAATATCAGCTTCTGGGTCTTTCAGTCCTTCAAACCTAAGGAAAAATTATTTT--TAATTTTTTGTAAATTTCGAAAGTTGTTTATTAAATTTTTTGGCA chr4 + 94230402 59883021 59883020 59883333 59883021 59883020 59883333 313 ACTTCATC---TTTAAAATTTGTGT------------TTGATGCAGATTACTATGCCCTCTTTGGTACTATGTGCCACGGCTGTGAATTCCCCATTGAAGCTGGAGACAGGTTCCTTGAAGCCCTGGGCCACACTTGGCATGACACTTGCTTTGTATGCTCGGTAAGTAAAGCTATTCTACTTTTTAAACAAACCCATGGCAGCAGTACTTGTGCTAACCTGACTGAT--ATGGGAGTTAAAGCTAAAATGCCTTTCAGTCCTCAGAACCCAAACAAAAAGCACTTTCACAGTTATTTGGAAG----GTATGTTGCTATTGTGAGCTTTTGGCA ........---......x.x...x.------------..:..:.......:....................:.....:..x........:.....x........x....x......x.....:......:....:..........................:.......:..---.::..:..::...x:...xxx:.-::..:.xx:.:x:.x...:.:.x.x.:x.--....:.:.xxx....xxx:x.:...........:x:....:..:x.....x:.:...--:.:..x....x..:----.x.x....:.xx.xx:.x:........ 8M3D14M12D135M3I23M1I29M2D57M2I14M4D27M 226/307 73.6% 313/94230402 0.0% 27/307 8.8% 34779355 NA +6987 chr4 + 190214555 94663963 94663962 94664168 206 CTGCTTCTTTTTCAGGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGA-------ATTTTTGAAAGTCAAC-AGTTCAGGAGAAGAGAAGGAATTTGAAGAGAAAAAGGAAAATTAAAATTACTAAT------TAATT--TTTAGATTCAATATTTATATGGAGTTTTGAAAA chr4 + 94230402 59883788 59883787 59883997 59883788 59883787 59883997 210 CTGATCCCATTTCAGGTATGTAATGACAGTTTGGAGGGTCAGACTTTCTTCTCCAAGAAGGACAAGCCACTCTGCAAGAAACATGCTCACTCTATCAACATCTGATTCTTGGAGCTCATCTTGTTTAGCA----------AATGTGCTGAGCAGAAGGAAAGGTCAAAATATCCATGTTCAATAATTGGTTAAAATT--ATTTATATATGCTATGTTAAAAA ...x.:.:x........:...x:...x........:........:..:....................x..x..:..............:...:.x.-------...:...:.:x...x.-x...:..x.----------...x..xx...x.:.......:x.x...x..::x..------.....--..x.:...--..x.x......xx:.x..:.... 97M7I16M1I9M10D36M6I5M2I8M2D23M 148/194 76.3% 210/94230402 0.0% 28/194 14.4% 34780175 NA +3798 chr4 + 190214555 94664729 94664728 94664812 84 ACGCAGTGGCACGCGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCACGAGAATCACTTGAACCCGGGAGGGAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......::.:..--....:.:.........::.:........x.x:.x...x...........:.:..xxxx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 18631533 NA +3035 chr4 + 190214555 94665481 94665480 94665527 47 TAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAAATAGA chr4 + 94230402 72596199 72596198 72596245 72596199 72596198 72596245 47 TAAAAAAGATATACAAAAAAAAAAAAGAGAGAGAGAGAACATAAAGA .......:.x.x.x.........................:.x.x... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 22069282 NA +3015 chr4 + 190214555 94665486 94665485 94665558 73 AAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAAATAGAAAAGAATGTGGCTGGGAATTGTGAATCAGAA chr4 + 94230402 46677676 46677675 46677748 46677676 46677675 46677748 73 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAA .................:.:..........x:.xxxx:.:...:.:..:xx.:xxx:...x....x....... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 47987810 NA +3148 chr4 + 190214555 94665489 94665488 94665522 34 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAA chr4 + 94230402 44112716 44112715 44112749 44112716 44112715 44112749 34 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAA .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 50552773 NA +43559 chr4 + 190214555 94668635 94668634 94669530 896 TCTCATTAACTGACTATTCCACAACTAGGTAG-------GCTCACCTCTGCCTCATTTGTTTAT-----TAGTTTAAGATATTTTTC-CAACTGTATAAAGTTAAGA----------CAGA-----TGTTTCTGTTGCACGCTCTATGTTGGGAATAAAAGAGAAATTCAAGTCTATTTGCTCACAGTATATTAAACTCCAGAAGCCAAACTTTTAAGAGCATCAAGTCTGCATCTGACATTTTAATAGCTGCTGTTTGGTTTCTATCAATCAC---GTCATTGCACATTAAAATGCACCGACAAAA-TAAGAGATCTGTCATTCCTTCGTTAAGAAACAGTAATCCAGTACAAGATTTATAGGCTTAAGTCTCAACCGTGTGTT--CACAATAAATCCCCATTCAGTGCTCAAACCAGAGCAAGCCTCCCTGTCGTTCAG--TGTTTTCTAGTCGAAATGTCCCCAATATAAGATTATCAAAGGTTTTCTTACAGAACTACATATAAAATCCTTTTGCCAGCAAAAGCTTAATTTGGATTGGCGGTTTCCCTTTTTGGG----------------TATGCTCAGACAAGATCTTGGTTATATCAGAAACACATAGGTACTGATGTATTATTAGCAGGCCTGGTGTTAATTAGGGAGAATTACCAGAAATAGTTTGCTTCGTGGAAATTTATTGCAGAATCACACTTGACTGATGGCAGAATAGGAGTTGCTGAGAGAGAGCAGCTCCCACTCATAACC-ACTAATTAATAGGGTGCCAAAATTCCGCAGAGAA-AGTTTCATCCCAAGTGTGGGAGCCTCCCAGGGAAAATGGTTCTTTTGCAGTATTTAAAATTTAACAGAGGAAAGGTGCTAGGACACATGGCTACCTAACAGAAATCTCAGACTGATATGGTTTTGTGTTGTACGTATGAATGAGAGGATTTAACT chr4 + 94230402 59888478 59888477 59889416 59888478 59888477 59889416 939 TCTCCTTAGCTGAATCTCTCTTAACTAGGCAAATGTGATGTTATTTTCTACCT---TTATTTACACAAGCAAAGGAAAACACTGCACATAGCTCTATAAAATTTAGAGGCAACTTTACAGAAAACTTGCCTCCCCTTCAGCATTTAGGCTATGAATGA--GACAAATGCAAGTCTATTTGCAAACAGTATATTAAACTCCAGAAGCCAAACTTTTAAAGGCATCAGGTCTGCATTTGACGTTTTAATGGCAAAGGTTTGGTTTCTATCAATCACAACGTCATGTAACATTAAAATGCACCGACAAAAATAAGAAATCTGTCATTCATTCATTAAAACACTGTAATCCTGTGTAAGATTTATAGGCTTAAAACTCAACAGTGTGTTTTCACAGTAAATCCACTTTCACTGCTCAGCACAGAACAAATCTCTCTGTCACTCAAAATGTTTGCTGGTCAAAATG--CGCTGTATGAGATCTTCAAAAGGTTTCTCACAAAATTGCATATAAA-TCCTTTTACCAGCAAAGGCTCAATTTAGGTTTGAGTTTTACTTTCTCAGGACATTGGCTAATATCTTGTTCTCAGACAAGATCTTGGTTATATCAAAAACACGTAGGGCCTAATTTATTATTAGT-GGTCTGGTGTTAATTAGGGGGAATTACCAGAAATAGTTTGCTTGATGGAAATTTATTATGGGATCACACTTTACTGATGGCAAAATAGGAGTCACTGAAAGAGTGCAGCTCCTTCTCATAACCAACTAATTAATAAGGTGCCAAAATTCCTCTGAGAAGGGTTTGGTCCTAACTATGGGAACCTCACAGAGCAAATGGTTCCTATGCAGTATTTAAAATTTAAAAGAGGAAAAGAA--AGGAGAAAGAGCTGCCCAGCAGAAGTCTCAAAGCAGTATGGCTTTTTCTTGAATTTCTGAGAGAAAATATTTAGCT ....x...:....x.x.::.x:.......:.:-------.:.xx::...:...---..:....:-----:.:xxx..:.:.:.x:x.-:.:..x......:..x...----------....-----..::..:x:.x..xxx.:..x.:.:x....:.--..x....x.............xx..................................::......:........:....:.......:..x:xx....................---.....xxx......................-.....:...........x...:....:.x..x.......x..::.................:x......x.......--....:.......x.x....x......:xx....:...::...:.....::...:--.....x..:...:.....--.x.x:...:....:x.....:.x.....:...:..:.:........-.......:........:...:.....:.:..x.x.x...x.:..:.::..----------------.:.x.........................:......:....xx..:..x.........:-..:................:.......................x:............:::.:.........x..........:.........::....:....x........:x.........-...........:..............x.x.....-:....x:...:..x.:.....:....x...:.x.........:.x...................x........:.x:--....x.x.x:...:..:.:.....:.....:.x:::.....:...x.x...x.:x.x...:x..:.:x.....:.. 32M7I14M3D8M5I18M1I19M10I4M5I32M2D114M3I30M1I77M2I54M2I18M2D46M1D50M16I59M1D123M1I34M1I77M2D76M 695/885 78.5% 939/94230402 0.0% 65/885 7.3% 34780157 NA +3237 chr4 + 190214555 94675835 94675834 94675943 109 GTAGGTCTTCTACCGTT-----CTTTCATAACTCTTTTGTTTTTTAAATTAGTTT--CCTTTTAATTTTAGGGTTTTTTTTCTTTTTTTTTTTCTTTTTCTTTTTTT---TTTTTTTTT chr4 + 94230402 22577953 22577952 22578065 22577953 22577952 22578065 113 GCAGGTTTTCTAACCATGTAAACTTTCat------tttattattattattatttGAACATTCCAATTTTAAGGATTGTTTTCTTATTTCTTTTCCTTTTTTTTTTTTAGATTTGCTTTT .:....:.....x.xx.-----.......------...:..x..xxx....x..x--.x..::.......:..x..x.......x...:.....:....:.......---...x:.... 17M5I7M6D20M2I50M3I9M 79/103 76.7% 113/94230402 0.0% 16/103 15.5% 72097882 NA +6122 chr4 + 190214555 94685366 94685365 94685632 267 TCTTGGAATGATTTTAAGCAAAATATCGTAGTTCATCAAAACCTGTCTGCAAAACGCCAACAAGTTAATAGTCATTTATGTTCAGAAGGAAAAAATTATGGCTGCCAGACCACCTTCATTTGGGAGATTTGGCCATAAATTTTAAATATCCATTGTGAGAATTATACTATGTGTAAGGAAATCAGCATCCTGCAGTTTTACAAGTGGGCCTTAGAAGGGCATAATGCACAAAGGCACAGTAAGAACAGAAAGACTTA---AGAAATGCAA chr4 + 94230402 59897708 59897707 59897956 59897708 59897707 59897956 249 TCTTGGAACTGACTCCAACAAAACATCAGAG-----CAGGTTGTATCCAGGTAATGACAAGCAGCCATTGACC-----TGTTGGGAATGCAGCAAGTG---------GACCACCTTAACATGGGAGAATTCATTTCAACTTTTAAA-GCCTCTCATGAGAATTACACTGTGTGCAAGAAACACATC-TCCTACAGTTTTACAAGTGAGGGTTAGGTGCCCCCAACGCACCAGGGCACAATAAGAAATAAAAGGTTTACAGAGAAATTTAA ........:x:x:.:x.:.....:...:x..-----..::x:x.:..::x:x..:.x...xx..::.x.:::.-----....x:...x.x.:x..x.:---------.........x.:x.......x..x:::x:..x.......-::.:x.::.........:...:....:...:..xx..x.-....:..............:.xx....:x.xx.x:..:....x.:......:......xx:....::...---......x:.. 31M5D37M5D20M9D39M1D39M1D70M3I10M 161/246 65.4% 249/94230402 0.0% 24/246 9.8% 34787658 NA +3705 chr4 + 190214555 94704338 94704337 94704425 88 TCTCAAAAAAAAAAGAAAAAA-GGTAAAGGGAGAGAAGGGGAGGGGATGGGAAGGGGAAGAGACAGAAAGGGAGGGGAAGGGAAATCTA chr4 + 94230402 9471183 9471182 9471270 9471183 9471182 9471270 88 TCTTAAAAAAAAAAAAAAAAAGGGTATGGGGAGGGAGGGGGGGGGGGTTGG-AGGGGAAACGATGCAGACAAAGCGGTATTGAAACCTA ...:..........:......-....x:.....:..:....:....:.x..-.......:x..::x.:.x::..x..x.xx....:... 21M1I29M1D37M 64/87 73.6% 88/94230402 0.0% 2/87 2.3% 85233155 NA +3472 chr4 + 190214555 94704959 94704958 94705040 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 18671758 NA +3061 chr4 + 190214555 94711429 94711428 94711474 46 TTCTTTTTTTGTTTGGTTGGTTGATTGGTTGGTTTATTTATGTGTT chr4 + 94230402 31166935 31166934 31166980 31166935 31166934 31166980 46 TTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTTTGCCTT ..:............x.......:...........x...x..:x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 63544494 NA +3394 chr4 + 190214555 94714580 94714579 94714661 82 CTCCTGTGTTTTGAATTTTATTTTTTTCTGGATTTTCTTTTTTTTTTTTCTTTTGCTTCCCACCGACTGCTTGAGATTCTAT chr4 + 94230402 74923691 74923690 74923770 74923691 74923690 74923770 80 CCTCTGGGTTTCATATTTCATTAGTTTATTGATTTTTTTTTTTTTTTTCCTGTTACTTTCCTTGG--TGCTTTGGATTCTGT .::...x....::x....:...xx...x.x......:...........:..x..:...:..x:x.--.....x:......:. 65M2D15M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 19790889 NA +3081 chr4 + 190214555 94714580 94714579 94714640 61 CTCCTGTGTTTTGAATTTTATTTTTTTCTGGATTTTCTTTTTTTTTTTTCTTTTGCTTCCC chr4 + 94230402 74920624 74920623 74920684 74920624 74920623 74920684 61 CCTCTGGGTTTCATATTTCATTAGTTTATTGATTTTTTTTTTTTTTTTCCTGTTACTTTCC .::...x....::x....:...xx...x.x......:...........:..x..:...:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 19793956 NA +3697 chr4 + 190214555 94717693 94717692 94717764 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAAAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 18684487 NA +5522 chr4 + 190214555 94723566 94723565 94723727 162 TAGGTGTTAAACAGCAACAAGAGCTCAGATTTACTTCCATAAAGCTCAGGGGAGGTATAATCAAAACATTACTTAAAATGTAATTGCTTTTCCATCATAA----TATTTAAAATTGAGAGATCACTTTTCCAGGTGTCAAACAAACATTGAGTTTTAAAAAGTGTC chr4 + 94230402 59915868 59915867 59916027 59915868 59915867 59916027 160 TGGGTGTTAAGCAGGAGAGAAGACTGAAGTTTGCTTCTAAAGGATTCTTGAGAAGTGACTTTGAAACATGGCTTAAAGGGTAATTGCTTTTCCATCATAAATTTTTTTTAAAGGAGAGTGA----TTTTCCAGGTGTTTGATAAACACTTG--CTTAAATAATGTC .:........:...x.:x:.:::..x.::...:....:.x.::::..xx.:..:..:xxx.::......x:......:x.....................----.x......:xx...x..----............:x:.:.....:.x:--:.....x.:.... 100M4I17M4D26M2D13M 108/156 69.2% 160/94230402 0.0% 10/156 6.4% 34807698 NA +3408 chr4 + 190214555 94726826 94726825 94726910 85 AGTGTCTTTCTTTTTCTTTCTTTCCCTTCCTTTCTTTCTTCCTTTCTTCTTTTCTTTTCTCTTTCTTTCTTCTTTCTTTCTTTCT chr4 + 94230402 57538428 57538427 57538511 57538428 57538427 57538511 84 AGTCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCT-CCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ...x....::xx...x..x....::....:.:x..::..-....:..:..x..x.........:....x...::..::..:.:.. 39M1D45M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% 37188398 NA +3864 chr4 + 190214555 94726859 94726858 94726974 116 CTTTCTTCCTTTCTTCTTT--TCTTTTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTTTCT-----CTTTCTTTGTTC---TTTCTTCTCTCTTTCTCTTTTCTTTCTTCCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATT--TCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCC-CTCTTTTCTTTCTTCCTTTTTATTT ....x.....:..:.:.::--.x..........:....:..x.....::x..--..xx.....x...-----....x:..x...---x.::.......::-...................:.x.:. 19M2I31M2D13M5I12M3I13M1D25M 86/113 76.1% 123/94230402 0.0% 13/113 11.5% 31029742 NA +3305 chr4 + 190214555 94726869 94726868 94726952 84 TTCTTCTTTTCTTTTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTTTCTCTTTCTTTGTTCTTTCTTCTCTCTTTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ..:..........x..:..x..:.:.....::....xx:.x:.x...:.:.......:..::.xx::..:x..xx..x...... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 37354842 NA +3235 chr4 + 190214555 94726895 94726894 94726952 58 TTCTTTCTTTCTTTCTTCTTTCTTTTTCTCTTTCTTTGTTCTTTCTTCTCTCTTTCTC chr4 + 94230402 43923906 43923905 43923963 43923906 43923905 43923963 58 TTTTTTTCTTCTTTGTTCTTTATCATTATTATTCTTTCTTCTTTCTTCTCCTTTTCTC ..:...::......x......x.:x..x.:x......x............::...... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 50802989 NA +3212 chr4 + 190214555 94726925 94726924 94726981 57 TTTCTTTGTTCTTTCTTCTCTCTTTCTCTTTTCTTTCTTCCTTTCTCTCTCTTTCTT chr4 + 94230402 93833601 93833600 93833657 93833601 93833600 93833657 57 TTTCTTTTTTTTTTCTTCTCATGATTTCTTTCCCTTATTAGTTTCTCTCTCTTTCTT .......x..:.........x:xx.:.....:.:..x..xx................ 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 893324 NA +3272 chr4 + 190214555 94729080 94729079 94729141 62 AATGTAAAGATCATCACCCAAATCTCTCTCTTTTTTTTTTTTTTTTGAGATGTATTCTTGCT chr4 + 94230402 56953307 56953306 56953368 56953307 56953306 56953368 62 AGTGTCATAATCATTATCCAAATCTACTTTTTTTTTTTTTTTTTTTGACACTTATTGTGGCT .:...x.x:.....:.:........x::.:..................x.:x....x.x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 37775773 NA +3089 chr4 + 190214555 94757837 94757836 94757905 69 GGCAAGTGAAAAAAAAAAATTCCAGAGGCAGCCGAGGAGCGAGAGGGAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 39594987 39594986 39595055 39594987 39594986 39595055 69 GGCAAAAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA .....:x.:.:....:......x..:..x::xx.::.:.x.x...::.......:.....:......:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 55162850 NA +3070 chr4 + 190214555 94769728 94769727 94769812 85 TGATTCAGTCTGTTATTCTGTCTTTAGGTGATGCCATCAGGGAATATCTTAGGGAAGACTAGAATTGGTGTTTTACGATTTTACT chr4 + 94230402 36240601 36240600 36240685 36240601 36240600 36240685 85 TGTTCCAGTTTGCCACATTGTCACCAGGTGATATCATCAGGGAATATTTCAGGTCATTGCAAAAGTAGGATTCTAGGGTTGCACT ..x.:....:..::.:x:....x::.......::.............:.:...xx.xxx:.:..x.:.x:..:..x.:..x:... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 58529127 NA +3512 chr4 + 190214555 94777897 94777896 94777968 72 GCACCTGTAATCCCAGCTACTGGAGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........x..:........x.xx.x...x..........::.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 18744691 NA +3022 chr4 + 190214555 94793997 94793996 94794045 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 42013535 NA +7892 chr4 + 190214555 94804711 94804710 94805012 302 AAATCATTTTCTTTGGGAACTATTTTTTGGTAAAGTAGTTTA---TGTGATGTGGAAACTATTTTGTAACACGTATGCCTAAGCAGTCGGCCTTTTGTTAGATCCAATTAGAGTTTTCTCTTCTGATTAAATGTGAGACTCTGAAATGTTTC---GCTTGGCTGCAGGCAAACTAAA-----TCACTTGGGACCTCTTCTGCGTCAGCTTTCTGCAGATGGAGAGTATAATATTAATACTATTTATGTTTACAT-----AATTCTGGAATTCATTATAGACAGAAATAGCCAGGATGTACACTTTTCTGGAGTAATGT chr4 + 94230402 59942763 59942762 59943059 59942763 59942762 59943059 297 AAAATATGTCCTTT------TATTGTTCTACTTAGTAGTTCAGATTGTGATGTAGAA-CTATTTTCTAAGTCATGTGCCTAAGCAGTGAGCTCTTTGTTAGATCCGGTTTGA-CTTTCTCCCTTGATAGAATGTGAGGCTCTAAAGTGGTGCTATGTTTGGCCATAGACAAACTTAATCCAGTCAGCTGGAAC--TCTTAACATCAGCCTTCTGTGATCCGAAGGTATTGAGCCACTG--ATGTGTGTTTACATTCAGCAAGTCCAGTATCCAGTGCAAGCAGCTATAGC---------CACTTGTCTAGTGTAGTGT ...x:..x.:....------....x..:x::xx.......:.---........:...-.......x...xx.:.:............x:..::............::..x..-:......:::....x:........:....:..:..x.x.---.:.....:::..:......x..-----...x:...:..--::.:x:.:.....:.....:::x:x..::....x:x:::.x.:--..x.:.........-----..x..::.x..:..x.::.::...xx.....---------.....x...:.x...:... 14M6D22M3I12M1D54M1D39M3I22M5I11M2D43M2D14M5I31M9D19M 195/281 69.4% 297/94230402 0.0% 37/281 13.2% 34861948 NA +3356 chr4 + 190214555 94808931 94808930 94809006 76 TGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGTACCTGGGAGCTGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033211 76033210 76033291 76033211 76033210 76033291 81 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ..................::........x.xx.x...x::....x...::.:....xx:..:..:.----....-...... 66M4I4M1I6M 58/76 76.3% 81/94230402 0.0% 5/76 6.6% 18775720 NA +3435 chr4 + 190214555 94818365 94818364 94818449 85 TCATCCCATTTTATACAGAAGGAAGCTGAGGTACAAAGAGGCTAAGTATCTTTCTGAGGGTTACACAACTGGTTTGAGGCAGAGC chr4 + 94230402 51253953 51253952 51254037 51253953 51253952 51254037 85 TTATCCCATTTTCCAGAAAAGGAAACAAAGGCCTCAAGAGGTGAAGTGACTTACACAGGATCACCCAACAGGTCTACCGCAGAGC .:..........x:.x.:......:.x:...:x:x......:x....:x...x.xx...:.:..x....x...:.:xx....... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 43564412 NA +3243 chr4 + 190214555 94819006 94819005 94819078 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGGGGTGGGAGGATCACTTAAGTCCAGGAAATCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::......:.x:xx.x.:.x.....:.::....:.:x.:x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 18785801 NA +5339 chr4 + 190214555 94852748 94852747 94852946 199 TATAAAGTAATTTTATACTTGCCAATTGATCTTCCCTTGGGAGCTACTGTAGTTTTTATAAATAGCTTGCTGACTTCGAAGAAACATATTTCTG-----TTCTTAGGAACTCATCTGGAAAGAACA-TTTCTTTGGGGGATATGGAGACCATGTGTGGAATTCCAGCTACAAGAAAAATTCTGGGATTTAGACAAAGAAATATTA chr4 + 94230402 59965350 59965349 59965552 59965350 59965349 59965552 203 TATAGAATAACCAATTATTAGCCAGTTGTTGCACTTCTGAGAATTG-TAAATTTCTGGAAAATATCCCTCTGTTTTCTGAGAAGTAAAGTTCTGCTCTGTTCTGGGGAATTCATCTGGAAAAAAAGGTTTCTTTGGGGGTGAGGGGGACCATCTGTGGAATTCCAAGTATGTAGAAAA-CCTGGAACAGAGATGGGCAAAAACTA ....:.:...::xxx..:.x....:...x.x:x.:::..:..::.:-.:x.x..:.x:x.....x.::x...x:...x:....::.x.x.....-----....x:....:...........:..x:-............xx.x..:......x............:x..::x::....-:....:.:xx...::::x...x.:.. 46M1D47M5I27M1I51M1D26M 127/197 64.5% 203/94230402 0.0% 8/197 4.1% 34887398 NA +7169 chr4 + 190214555 94875816 94875815 94876217 402 TCTCTTTGTTGACAGGGTGGAGTTCAGCCTACTCTTTCTTAGATGT-GAAAGGAAAGGAAGATCATTTCATGCCTTGTTGATAAAGGTAAGTTCATAGTAATTATTAA------------------ATAATT---------TGAGATGTTTG-----GTAGGCATCGTTACTGCT-----------TTTTGACACTCCGACTTTGTGGTATGCTG-AAGTTAACAGAAAGATAATACATTTTATAAGATGAATGGAATCTACAATTGTTCCTTTAGTTATCAGTAAAAACACATAAGATAAGGAAACTGATGTAAATCAACATGACAAGGTGGATGTGGATTTGTTCTATAATGAGAAAGTAACTTGTG---CTTTTCATTTGAAAT---GTTGGCCTACACACTTAGTCTGTTCCTCAAACATTTACAC--ACTTGGTAATAACCTTTTACCAA chr4 + 94230402 59973980 59973979 59974421 59973980 59973979 59974421 442 TTTCTTTGCCCACAGGGTGGAGTTCATTTCTTTTGTCCTTGGAAGTTGAATAGCAGAAAGGGACATTTCAGCTTTTCTTGATAAAGGTAAG---ACAGCATCTATTGATATGATAGGACACTGTTCATTATTACAAGCTCATAGAAAGTTTGTCAATGGAGGGTTTGTTTATTCTGTGGGTTTTTTTTTTTTCACCCAAGTTCTGTGCTTTGTAGTAAGTTCAGTACGTGATAACATAAGTTGCATTGGGAATGGAATGTGTAATTCTACCAC-AGGTATCAGTAAAAGCTCTGAAGATAAGCAAGTACATGTAGATCAACATGACAAAGTGGATAGCAATTTGTTCAACTATT-----GAAGCTTGTGACATTTTCCATATCTCATTCAACTGGCCTGCCCAACCATTCT----CCATAACACTTACACATATTCAGTGAGAACttttaaataa .:......::x...............x:::x:.:x.:...:..x..-...x:.x.:::.:.:x.......xx::..x..............---.:..:.x:....:.------------------..x...---------.:::.x.....-----.x...xx.:...xx.x..-----------....xx...:.x:::.:....x.x..:x.-.....x.xx:x:x.....:.:.xx..::.xx:x.........x.::....x.x..x:-..x...........:.x.xx........x..::xx.....:.............:......:xx:........x.:x..x-----.x.:......---:...:...x.xxx..---::......:.x..x::.x...----.:xx....:......--.:.::..:.x...:...x.x:.. 46M1I44M3D14M18I6M9I11M5I18M11I29M1I57M1D80M5D10M3I15M3I21M4D15M2I23M 258/389 66.3% 442/94230402 0.0% 66/389 17.0% 34901836 NA +17019 chr4 + 190214555 94889976 94889975 94890373 398 GGAATGAAG-GGAGGGCATGGCAGGCTGTTGAAATTTGTAGTGTGTTGGCATCTAGCAAGTGCGTTTTGCTGTGGGGTAAGTTCTGTGGCTTGTTTTCTGTCTTCGTGAATAGAGCCTTTCCAACTTTGCCAAGCCTACAGTTAATGTGGTCAAGGGATTTATTATGAAATGTACTAAATCTTGGCGTGGAGCTAATTGCATATAACAAGAAGCCTGCTAGAGGCTTGGACCTGAGAAGTGACACATGCAAAAAGCATTCTCTTTCTGATGCTGCTGAAAGAGGTTTTGTGTAGGGGAATGTCTGCATGTCTGCACTTATTGCTAATGAGGTAACCCCCTCTCCCCCAAAGCTTATTTCTGAGTTACTTGTTAA---------ATAAATGTAAAATTCTCTCTCTCTT chr4 + 94230402 59988808 59988807 59989187 59988808 59988807 59989187 380 GAAATGAGGAGGAAGGGAGGGAAGGTTGTTGAAATCTGCTGTGTGCTGGAATTCGATGAGTGCATGGTGTGGTGTGGTAACTCCTGTGGCTCAGCT-CTGCCCTGATGAATGGAGCCTTTCCAGAGCTGCCAAGCCCAAAGCAAATGTGGTCA-GGGATTTATTATGAAATATACCGAGCTTTGGCATGGGGCTAATTGTGTATAACAAGAAGTGTGCTGGAAACTCAGACCTGAAAGGTGACAAATGCAGAAAGTATTCTGTATCTGATGCTGGTGAAAGAGGTTTTGTGTATGGAACTGTCTG-----------TTTTTGCTACTGAG------------CTCCCAAACATAACCACTTGTTTTCTTGTTAATAGTTCAAGATAAATGTGA---TTTCTTGCTTTT .:.....:.-...:..x.x..x...:.........:..:x.....:...x..::::::.....:.xx..:x...x.....x.:........::x:.-...:.:.x:.....:...........:xx:.........:.x..:x..........-.................:...::.:::.....:...:........::............:x....:..::..::.......:.:......x.....:....:.....x.x..........x..................x..:.x......-----------..x......x....------------.:......xx.x.::x..x:x..x........---------........:.---.:...:x..:.. 9M1I86M1D56M1D151M11D14M12D32M9I10M3D12M 281/370 75.9% 380/94230402 0.0% 38/370 10.3% 34901168 NA +6131 chr4 + 190214555 94894277 94894276 94894447 171 CCTTGGCAACATTTCAGGGGTTACATTTTCACATAGATCAACTGTTCTTGAATAGTTTCTCC-AATATATT---GGCACAGACCAGCTTTTCTTAAACAGTAAGCATTTATACCTTCTTTCCCCACCTTTTTTCCCT--CAACAAACATAGCCATTATGGCCTTTAAAAGAGAGAGA chr4 + 94230402 88459265 88459264 88459441 88459265 88459264 88459441 177 CCTTGGCAGCCTTGCACAGGTCATATTTTTACATGGATGAACTGTTCCTCAACAATTTCCCCTAGTGTGCTAGCAGCACAAACAGGCTTTTCTTTGCGAGCAGGTACGTGTGCCTTCTTTTTCCAGTTCTCTTCTGTTCCGACACACATGGCTCATGTGGCCATTTGCAAAGAAAAA ........:.x..x..x:...:.:.....:....:...x........:.x..:.:....:..-.:.:.::.---:.....:..x:.........x:xx..:.:.:.:x.:.:........::...x:.:.:...:x.--.:...x....:..:xx.:.....x..x:x.:...:.:. 62M1I8M3I63M2I38M 115/171 67.3% 177/94230402 0.0% 6/171 3.5% 6435012 NA +9576 chr4 + 190214555 94900031 94900030 94900357 327 GGTGGG-AGAAAAGGCAAGGGTTAGAAATAACCTGCCAGTTCTAATCCTCAGAATCTTTGCATAAACAAGATTGGAATGAAAACAGGATTTTTTTTTT--------------------TTAATTTGGAAACCTGTAACTTATCCAGTCATAACATTCCATGCTGAGTGCATGCAC---ATTTTAGAAAGACACCACAGTGTAATGCGCTAGGTTCCCAAATCTGCTTCAGTGCTGGCTTTGTGTATAACTTGAACCTAAGATGTCAATTAGCTGGATGGTGTATTTTTACATAGCATCCGGTAACATGGAAATAGAGGATAAAGTGGCCAGCAAAAAAAAAAAAAAAATAG chr4 + 94230402 59994072 59994071 59994399 59994072 59994071 59994399 328 GGTGGGCAGAAGAGG---GGGTTAGGAATAACCTGCCCATTGTGATCTTTGGAGCCCTTATGTAAACATGACAGGAATGAAATCAAGGttttttttttttttttttttttttttttACTTTATTCGGAGACCTGTATAGCATCCAACCATAACATTCCTGGCTGCGC-CATGCGCTCTGGTGCAGAAAGGCCCTACAGTGTGGGAGACCGGGCCTGCGGATCTGAGTCAGTGCCTGCTTTGTGCATAGCTCCAGTGCTTTACGTCAGCTGGACCAAAGGTGGATTTTTGCACTGCGACC------------ATAAAGGATGG-------AAAAAGGAGGAAAAAAAGATAG ......-....:...---.......:...........x:..x.:...:.::..::.:..:::......x..:x.........x..:.:..........--------------------..x...:...:.......xxx:.....::...........xx....x.:-.....:.---:x.x:......:.x.:.......::x:x:.::..:::x.::.....xx.......:x........:...:..:x.::x:xxx.:....::.:.x:x:.x....x......:..:x..:x..------------...:.....::-------.:x..::.::.......:.... 6M1I8M3D80M20I49M1D7M3I121M12D11M7D22M 208/304 68.4% 328/94230402 0.0% 47/304 15.5% 34905959 NA +3104 chr4 + 190214555 94907920 94907919 94908050 131 TGCACCTGTATTCGCAGATATTTGGGAGGTTGAGGTGGGAGCATTGCTTGAGGCCAGAAGTTTGAGGCTGTAGTGTGCAATGCTCTTACCTGTGAATAGCCATGGC---CCTCCAACATGGGCAATGCAGTGAG chr4 + 94230402 76033205 76033204 76033337 76033205 76033204 76033337 133 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGC-CAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAG .....x....x.:x...x..:...::...:....x:xx.x.x.x::.....:x.......:..x:........x:::::....-.xx:.xx:..x:.:x..xx:..---.::...:.....xx.x.....x... 83M1D22M3I25M 81/130 62.3% 133/94230402 0.0% 4/130 3.1% 18874715 NA +3040 chr4 + 190214555 94908038 94908037 94908099 62 GCAATGCAGTGAGACCCTGTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACA chr4 + 94230402 6738280 6738279 6738341 6738280 6738279 6738341 62 GTAATACAGTCAGACCAACTAGTTAAAAAGAGGTAAAAAAAAAAAAAAAATAGGAAAAAGTA .:...:....x.....xxx.xx.......:.::x................x.:......::. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 88169758 NA +3219 chr4 + 190214555 94908058 94908057 94908113 56 CTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACAAAAAAAAGTAAAGG chr4 + 94230402 27719993 27719992 27720048 27719993 27719992 27720048 56 CTTTAAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGATTGAGGG ......:..:....:.::.....:......:...:.:...:....:.:.x.:.:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 67188065 NA +3822 chr4 + 190214555 94938359 94938358 94938437 79 GTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--....:.:...........::........x.xx.x...x.......:.....:..x:xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 18905158 NA +3921 chr4 + 190214555 94938887 94938886 94938986 100 TGTAGTCCTAGCTACTTGAGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGGTTGCAGTGAGCTGTGATGC--AGCCACTGTATGCC---AGCCTG chr4 + 94230402 76033211 76033210 76033312 76033211 76033210 76033312 102 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ......:.:..........:........x.xx.x.:.x.......:.....:..:.:x:..:..:..---:x::......--...x:x...:....---...... 67M3D10M2I14M3I6M 72/97 74.2% 102/94230402 0.0% 8/97 8.2% 18905676 NA +15322 chr4 + 190214555 94944622 94944621 94945152 531 AGGGTGTTAGACGGTGAAATGATGATGATGTTTATACTTT------TTGGTTAGTTCTAGTGGTAAGTGAAGCTTACTGAAAGCAGAACTATGGAGAGGACCTAATTACCTGCCTTTAGTGATTTTTTTTAAAAA---TGAACTTATTGCCTTATTGTAATGCTACCATAATGTTTATGGTGCAACCTGTATACCTACATTGACTGGAGAGATTGAATGGCCTGACTGTATGGGACACAT-AATAGATTCCAGCTTTTTTCCGTGACATCATTATTATAACAGACTTCTTTAAGAATATGAACAGCAGCTGTGCACTTTTG-TGAGCTTTACATTATAAACCATAACAGCCTGTTCAGCTCTATACAAGTG------ATGGGGCAGCTTGATTCTTAAC------AAATGAAGCCAAACTCAG---CTGTGAAACTGTTAACAGATCTAGTAATGACATAGG-CCCCATGTATGGAACATTTCATAACACAACAGGGGAAAACAGGGGCAACGGCCATTTAGCACATTGGCTAAGAAGGTTTTCTTTACCTCTTGCTC chr4 + 94230402 60021525 60021524 60022076 60021525 60021524 60022076 552 AGGTTATTTGACAGTGAGCTGGCTGTAGCTTTTGTATTTTGCTTTATTGGGTAGTTCCAGTAGTAAACTTAATTTATTGAAGG-AAAGCTA-GTAATGACTTTAGTTGCCTATTCTGAATGATATTTTTTGAAAGAACTCCGCTCATTGC-TTGCTTTTATTTTAATGTAAGGTACATGGTGCAACTTGTATACGCGTATTGTCTGAAGGATTTGAATGGCCTGCCTGTCTGATTCATTTTAATAGATTCCAGCCTTTTTCCATGACATCATTATTATAACAGCCTTCCTAGCAAATATGAACAGCTGCTGTGTATTTTTTCTGTGTTTTATATTA-AAGCAGTAACAACTT-TTCCATTCTCTACCAATGACAGCAATAGGCTTGTCTGATGTAGAACAAAATGAAAAAAAGTCATAGTAAGGATCTGTGATGCTGTTAACAGG-CCAGTAATGTAACAGGTCCCCATGTATGAATAGTTTCATAATGCAATAAGAGATTACTTATGCTGCTGTCATACTGGTCAAAGGTTGGTCACATTTCCTTCTGCTTCTCCTC ...x.:..x...:....:x..::x:.:::x...:..:...------....x......:...:....::xx.::...:....:.-.:.:...-.x.:x.:x::..:..:...::::.x.:....x......:...:---.xx:..:.....-..::.x.x..x:..x::...x..x:..........:.......x:::....x...:..::x............x....x..:xx..:x.-.............:.......:....................x....:.x:x:............x......:.:....x-..x.:....:....-..:.x:.....:.:.-...x::...x...x.:..------..:..x:x.::....x:xx...------...x:...:..x.x.x..---......x:..........:-.:.......xx.:...-...........:.xx:........::...:.:.:..xx..xx:x..x:.x.:...x:x.xx..xx..:.::xx.x:...:...:xx..::.x... 40M6I37M1D7M1D43M3I12M1D89M1I80M1I14M1D15M1D18M6I22M6I18M3I19M1D16M1I95M 356/525 67.8% 552/94230402 0.0% 33/525 6.3% 34923097 NA +3206 chr4 + 190214555 94951986 94951985 94952053 68 GAGGGTGTGTGTGTCTAGGAATGTATCCATTTCTTCCTGATGTTCTAGTTTATTTGCATAGAGGTGTT chr4 + 94230402 77846765 77846764 77846832 77846765 77846764 77846832 68 GAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT ....:.x...:..:.:.:...:......x........x.....x::..:.x:...:.xx.x....:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 17105221 NA +11126 chr4 + 190214555 94960479 94960478 94960671 193 AACAGAAGAGAAAAATATTTGGCATTCTGAGGTAAATTAGGTCTAA--GGGTCTGCTTTAATTTTAAAAACAAAAGCTCTACTGTTTCTAGCCAGAAAACCAAATATCTTGGAGTTTAACATGGAAAATGTTTATAGTGTTGTATAGTTTTATTACTACAGACAGAAGGAAAACAGTTTATTGAGTAGCTTTCAG chr4 + 94230402 60026903 60026902 60027097 60026903 60026902 60027097 195 AATAGAAGACAAAAATATTCGGTGTCTTGATGGAAAGTGAGTCTAAAGGGGTCTGCTGTAACATGAAAAACAAAAGGAGCAGTGTTTCCACCTAGTGCTCCAAACATCTTGGAGTCAAATGCGGAAAATGTTTATAGTGTTGTATAGTTTTATTGCTACAGACTGAGGGAAAACAGCTTATTGAGTGACTTTCAG ..:......x.........:..::.::...x.x...x.::......--.........x...:x.x...........xxx:.x......:.x.:..x:xx.....:..........:x..:::................................:........x..:.........:.........::....... 46M2I147M 153/193 79.3% 195/94230402 0.0% 2/193 1.0% 34933576 NA +3220 chr4 + 190214555 94961999 94961998 94962094 96 ATAGTCACCTTATTGTGCTATGGAAACATAGAAACTAGATTTTATTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 18373024 18373023 18373116 18373024 18373023 18373116 93 ATATACACCCTATTGGAC---ATACATATAAACACTGACATTTATACATTCCTTTTCTCTTTATTCTTTTCTCCTTCCTTCTTACCTCTCTGCCTT ...xx....:.....x:.---:x.x.:...:.x...::xx.....x.x...:..:.:.....x:.:.:..:..:.......:.x...::..x.... 18M3D75M 62/93 66.7% 93/94230402 0.0% 3/93 3.2% 76588975 NA +11135 chr4 + 190214555 94988601 94988600 94988804 204 TACAACATTATTTCAGTTGAAAAGAACAAATGACCTATTTATTAACTGAGCAGCCAATACTTCTCATACTAATAATGGGTATGTA-TTACAATAAAGTGGCAGCAGTAAGGTTGGT-AGACTTATGTATGATTTTCCTGTGGGGTCCTGGGAGCCCAAATTATTTATTACTTGAGAACAAAGAACCTTAGAGTTAAAGGTAAGTGA chr4 + 94230402 60034481 60034480 60034686 60034481 60034480 60034686 206 TACAGTATTGCTTCAGTTGAAAAGAACAAATAGCCTATTTATTAAGTGTGCAGTCAATACCATTTCAGCTAATAGTGAATAAGCACTTACAATAATCTATCAACAGTAAAGTTTTTTGGAGTCATGTATGATCTTCCTGTCTGCTCCCTGGAGCCCAAAGTATTTATTACTTGGAAACAAAGAACCTTAGAGCCAAAGGTAAGCAA ....::...::....................::............x..x....:......:x:.:xx:......:..::..x.:.-.........xx.:x..:......:...xx.-:..x.:.........:.......xx.x...:x..........x.............::.................::.........::. 85M1I30M1I89M 159/204 77.9% 206/94230402 0.0% 2/204 1.0% 34954120 NA +20420 chr4 + 190214555 94995481 94995480 94996319 839 ATTCATAATGTGTCATAATTAAGTTTTATAAAGCTTGATTGACTGACATTTAGATATGACTTTTATAAAGGGTTTGAGATTGTGTTGTTTGGCCGAAACAAAGGCAGTATTTCCTTTCTTGTCTTTGACTCCACCTAGCCCCACTTTTCTCCACCTACCTGAGGAAAGCTGTATTTCTTC------------AGACAAACTTAATAATTGCCCTTCTGTGCCTGATTTGGGCCTCAGGAAAGGCCCATAGCATCTGTAAAGCTGGCAGCAGAATGGTATTTCCAGGCAAGCACAGGGTTGCTGGGTAGTGAGCCAATCCACAGCTTTGTCTGAGCAGCTGAGAACTTTGCCGGAGTATTACCACGGTGTTCAGTAACACAGACCTGTGCCATGAGCAAGTAAAGCACTGAGCAAGTGTCAGGGTCAATATTTATAGACCACTACGTAGCTGCCTTGCATAGAGAGAAAACGGGAGAGTAACATGCACACAGAGGGCAAGGAAAGAAAGACTGCAGTGGAGGGAATGTTAATTTCCAATTTTTTC------------TGAAAATGTATTCTTTCTAACTGTCAGGTTCAGACTTC---TGCTGATTCATAACCATTTGGCTCTGAGCTATGACAAGAGAGGAAACAAAAAGTTAAACAAGCAAGCCTGCCATAAGTGAGAAGGTAAGTAATTAGCC---AGTTCAGTCTCGCTGTTACTCGTA-------------------------------------AACTCTCTCCCTGTTGGCTGCACTGCATCAGTAAGCAAAGGGCTGTGTGGCATGTCAAAGCTAATGAGGAGGGCTGCCTGCTGGGTAAGAATGTTGTTGGTGGCAGAGCCGTTTTGTGTACTGCTGTTGAGAATGCCGGGTACATTC chr4 + 94230402 60041243 60041242 60042084 60041243 60041242 60042084 842 ATCCACATTATCTGGGAATTAGAGCCTATAATA-GTAAGTAAATTATATTTAGGTATG--TGCTGCGGTGTGGGAAAGATTAGGCTGCTCAGCCGAAACAGA---AGTTCTTCCTCCCCCCATTTT-----------------TTTTTTTCCACCTGCTTGCAAAAAGCTGTATTTCTTTTTTTCTTTTTTTGGACAAGCCTCATAATTACCATTCTGTGCCTGCTTTGGGCCTCTGGGAATGGCCGCAGCATCTGTAAGGCTGGCAGCAGAAAGGTATTTCCAGGCAGGCA--GTGTTGCAGGCACGGGAGCCAATCCATGGCTTTGTCTGAGCAGCTGAGAACTTCATCCCAGCCATGCCGCGGTGTATGGTGACACAGGTCTGTGCCACGGGCAGGGCGAGTGCTGAGCAAGTGTTGGGGCCAATATTTATAGACCACTGCACAGCAGTCCTGGGAAGAGAGGCGGGGAGGGAGT------------GAAGG---AGAAACCTTGGCTGAACTGAAGGCAATTTTATCTCAGGTTCTTGTCAGTTAAATAACATGAAAATAAATCCCCC----TTGTCAAGCTTAATCTTCTCTTGGCGAATTATAGCGGTCCTGCTCTGCATTATGACCAGGTGGAAGCCACAGATTTAAAACAAGAGTTTTGT-----------GGGTAAGTAATTGATTTAGTGTTTTTTGTGGCttttatttttatttattttttatgttttttaCCTCCGGTGTCCTAGCCAGCTTGCTGCC-ATTGAGGGCATAGCATCTGTAAG-GGAGAGCTGTTTGTCTTTT---GGGTACAGTGTAGCACTGCCTGCTGTGTAAGGATGTTCTGTGTG---AGGTGATTTTGGCTACAGTTACAG-GAATATCAGGTTGATTC ..:..:.x.:.x.x:x.....::x::.....x:-x.:.x.:.x.x.:......:....--.x:.::::x.x.xxx:.....:x.:..:.::.........:.---...x:.....::.::xx:...-----------------:....:.......:.:..x::...............:------------:.....:.:.x......:..x...........x..........x..:..x.x..::...........:.............x..............:...--.x.....x..xxx.x...........::.........................:::.xx..:xx.:..:......x::..:......::........:.:...:.xx:..::............::...:..................:.::...x.:.:..x:x......:x::x.:.:....------------..:..---:....xxxx.:...x.x..:...x...x...x:.:xx:x.:..x..------------.......:x..:.:::----:.....:.:.:.:x....---..x:..x.:...:.x:.::x......x::......x..:x:.:.:x..x.:.x.....xx.:x.:x::..:-----------:...........::::---x...:xx.x.x...x...:.:x..-------------------------------------.:..:x..x..-:...:xx...:x.....x.....-::..:.....x..x.x.x.---:.x..xx.x.x..x:..........x.....:.....x.xx...---::.:x:.....xx...x.:.::x.-....::.:...xx.... 33M1D24M2D42M3D21M17D37M12I100M2D184M12D5M3D46M12I16M4D18M3I71M11D16M3I24M37I11M1D23M1D19M3D44M3D24M1D17M 521/775 67.2% 842/94230402 0.0% 131/775 16.9% 34954238 NA +3299 chr4 + 190214555 95012010 95012009 95012067 58 CTCTGTGTCAAAAACAACAACAACAACAACAAAAAAAAAAAAGAAAGAAAAAGAAAAG chr4 + 94230402 92559660 92559659 92559717 92559660 92559659 92559717 58 CTCTCTGGAGAGGATGACAACAACAACAATTAAAGAAAAAAAAAAAGAAAGAAAAAAG ....x..xx:.::.::.............:x...:.......:.......:.:..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 2452350 NA +11241 chr4 + 190214555 95012581 95012580 95012966 386 CTGCTTCTTATTAATACTGATTTTGA-ATTAATATTGGCATAGAGACAGTTATTTTTGATGCTTTTCCAGCTGTGTAAATATACGTATTGCATAAACAAACTAAAATTAATCACAGAATTTACTGTGCTAGCAGCATTTACAACTTCATTGTGGACCCA-TGTTTTAAACATCTGTCCTTCATTTACTATATCTTAAATA-GGCTTTTATAACACAAGC-AGAATTACAAGTATTTACACAAAGATGATAAAATACAATAGTACTGAG-AAGAAGAAACAAAAT--------TTTGGAGAAGAATTTCTTCATAATTAACACAGTTTGGGTTAGTAATTCTCG-CTCTCATAGAAACAAATAGGTGCCTATCCAAAATAAGGAAGAAATCATTTTTAAGA chr4 + 94230402 60058760 60058759 60059147 60058760 60058759 60059147 388 CTGCTGTGTTTTTTCATTGATTTTTATATTAATATTGGAGCAAAGACAGTAATTTCTGGTGCTTTTACAGCTGTGAAAACATGCCAATTGCAAAAACAGACTAAACTGTACCAAAGGACTCACTGTGCCAGCAATATTTAATACTTCATTGTAGGTCCACTGTTTCAAACATCTGTCACTCATTTACTATATTTTTAATACAGAATTTTTAGTGTAGGCAAAAAATGTAGCTGTTTATAATAAGATGCT----TTCTCTGCTACTGAGAAAAAAGCAACATAGTTAGGATTCTGTGAGAAAAAATATATT--TGATTTATAGGATTTGGGTCATTGGCCTTAGACTTCCATAAAA--TAGTAAGTCACTTTT----ATTGAAACAAACACATTTTTAAGA .....x:x.x..xx:.:.......x.-...........x::.:.......x....:..:.......x........x...:..:.xx......x.....:......x.xx.:..x..:.:.:.......:....::.....xx..........:.::...-.....:...........x:.............:..x....-:.xx...x..::::.:..-.:..x.::.:x.:....:.xx......x.----.x.xx.:x.......-..:...x....x.:.--------.x..:::..:...x.x..--.:...x.:.x::.......:.x.:::::.x.-..::....:..--x.:..:..xx..x.:----..x:::.x:..xx........... 26M1I132M1I40M1I18M1I29M4D15M1I15M8I18M2D31M1I11M2D15M4D24M 261/374 69.8% 388/94230402 0.0% 26/374 7.0% 34953821 NA +16714 chr4 + 190214555 95018800 95018799 95019098 299 TGGAACCTGAACTGGAAGAGTTAATCTTCAAGTTCAGCTTGAGCTGTGTTTACTGATCCTTTTCTGCTGCTTCTTGCTAATTGGCACCTCGGACTTCATACTAATTAATGGGATAGCAAGGGGCAGGTGGCGCCAATCTATTTTGATAATCCTTGTCAGCAATGTCTGTGTAATCTTTTTGTTTAATTATAATGAATGTGCAATTGGGGTGCATGAACTTTCAACAGTTTTTTTTT----------------------------------------CACTGGAAGTTCACTGGTCAAGGGAAGTTTTGCAACTGTCGAATACCGCTTCATATTGCATAC chr4 + 94230402 60064635 60064634 60064971 60064635 60064634 60064971 337 TGGGGCTTGAGTTGAAAGAGTTAATTTTCAAGTTCACCATGAGCTATGTTTACTGATCCTTTCCTATTGCTTCATGATAATTGGCACCTCAGATTCTCCACTAATTAATTGGGTTGCAAGGGGCAGGTGGCGCCATTCTATTTTGATAATCCCTGTCAGCAATGTCTGTATAATCTCTTTGTTTAATTAAAATGAATTCGTAATGGGGGTGCATGAACTCGCGACAGTTTTTTTTTTCTGCCCTTCTTTTCTCTGTCTCCTCACTTTGCGTTGCTCCAGTGGGAGCTCGCTGCTGGGGGACAGCTCTGTGGCTGC--AGCACCGCCGCCTTCTGCGTGC ...::.:...::..:..........:..........x.x......:................:..::......x..x.............:..:.::x:..........x..:.x....................x................:................:......:............x.......x:.:...x..............:x.:.............----------------------------------------..x...:..:..:...x.x::..:x..:.:..:::...:--.::.....:x.x.x:...:.:. 236M40I39M2D22M 236/297 79.5% 337/94230402 0.0% 42/297 14.1% 34954165 NA +10826 chr4 + 190214555 95028262 95028261 95028548 287 TTTAAAAGAAACTGTTGGAAT-----TTAATTAGTTTCCAAAAGCCCTATGTGAACTGTAGCAGTTGGTTGGTATTATTTGTATAATGTTTTGTTGTTTGACTTTGGAAGCATTATGTTCATGTATTGTGGTGATGGCCTGC-TGAGTAATTGCAAGGTTCATTATACTACCAAGACTGTCAAGGGGTATTTATGGATATTCATGTGCAGTGAACCCTTGAACTTGAACTGGTCATTCTTG--TCTCCCATGGCTGGAATTGTGTTTACTCTAAA---TGGCAGGAGAAACTTTAATT chr4 + 94230402 60074103 60074102 60074396 60074103 60074102 60074396 294 TTTTAAAAAGAGGGTTGGAATATTTCTTAAATAGTTCTTAGATGTACTATCTCAGCCGTAGCACTTGTTCAGAATTCCTTTTGGAA-GTTTCTTGCTTTAAAGTTAAGGGCATTATGTTCATGTATTGAGTAGACTGCCTGCATGAGTTGCTGCAAAGTTCATTATACTGCTAAAGCTGTCA-GTGGTATTTATGGATATTCATGTGCAGTGAACCTTTGAACCCGAGCTGGTCATCTGAGCATTGCTTGTAGTTATAGTGGTGTTTATGCTGAACATTGGTAGCAGTA--TTTAATT ...x...:.:.xx........-----....x.....:::.:.x.:x....x.x.:.:......x...x.::.x...x:..x.:x..-....:x.xx...:.xx..::::...................x.xx..:x......-.....x::.....:............:.:..::......-.x...............................:......::..:........::xx.--.:x.:::.:.:.:x.:.x.......:x..:..---...:..x..x.--....... 21M5I60M1D55M1I39M1D58M2I32M3I11M2D7M 206/283 72.8% 294/94230402 0.0% 15/283 5.3% 34954159 NA +27085 chr4 + 190214555 95044197 95044196 95044735 539 GTTGCCAGTGGTAACTATAGAGAATTTTTTGAAACAGCACCCTTTTAATA-ACAATGGTCTCCCCAAATATATTGTGGCATAGCTTTAAACTTTATTAAGTCTGTCTTGGACTCCCCCTTCCTCTCCCTGAGTAAATGGAAGAAAAGTTTGGCAGGCTCCATGCTGTGCACTTGATTGATGCCCAGAACATCTGAAGGACTTTTGTGTCCTGCCTGCTCTCCATGAGTGCATAATGTGTGAATACTTAAAGAAGGTCAGCCCTTATCACATGTAATCTAGGCCTGAAAGCAGATCAACAGTGACAGTCATATCCCGTAAGTAAGAACACAAATCCTCCTCTACATGCTTTAGACAAGTTGTGGGATATTTTTTCTCTCTT-------TTTACCCCTTCCCAC-----------TCATGGAGG-------ACCTTGGCAGAGCAATGAA-AGCAGAGAGAAGACGTGCTCAGAATAATGTGTCGCTCGTTCAAGGGAGAAAGGGATTGTTTATTTGTAATAATGTGATGGTCTTTCA-CTCTGCAGC-TGAAGGGAGCTTTGGGTTGTT chr4 + 94230402 60084043 60084042 60084592 60084043 60084042 60084592 550 GTTGCCCATGGTAACTGCAGAGAATTTGTTGAAA-AGCACACTTTTAGGAGACAATGGGC--CCCAAATATACTGTGGCACAGCTTTAAACTTTATTAAGTCTGTCTTGGACTACCCTCTCCTCTCCCAAGCTAAGTGGAAGAAAAGTTTGGCAGCCTCCACGCTGTGAGCGTGATTGATGCCCAGAACATCTGAGGGACTTTTGTGTCCAGCGCGCTCTCCATGAGTGCATAATGTGTGAATGCTCAAATAAGGTCAGCCCTTATCACGTGTAATCTAGGCCTGAAAGCAGATCAACAGTGACAGTCATACCCCATAAGTGAGAACACAAATCATCCT-TGCATACTTTGGACAAGTTGAGGGAT-TTTCTCCCTTCTTGCTTGCATTTTCCCCTTTCCAAATGGGGGGAGGTGATGGAGGGAGGCAAGCTTTGGCAGTACTCTGGACAACAAAACAAAACACTACAAAAAACAAAGTAGC-------CAGG------AGGGAATACGTGTCTGGAATACCAGAGGGCTCCTTCAGCCATGCTGCATATAGGGAGCTGGGGGTTGTT ......x:........::.........x......-.....x......:x.-.......x.--..........:.......:................................x...::.........x::x...:...................x.....:......x:.x.......................:..............x..x:............................:..:...x..................:.........................................:...:.....:............x....-.:...:....:.........x.....-...:.:.::....-------...x......:...x-----------.x.......-------:.:.......x:.xx..:.-.:..:.:x:..:xxx.:.xx.:..:..x..:x.-------..:.------.....x.::x.:.:..x....x::x::x.x..:....-.:x...x..-.:x........xx........ 34M1D15M1I9M2D277M1D26M1D13M7I15M11I9M7I19M1I33M7D4M6D37M1I9M1I21M 425/521 81.6% 550/94230402 0.0% 47/521 9.0% 34960154 NA +9880 chr4 + 190214555 95055378 95055377 95055649 272 AATATTGCTATGCGGCATCAGTTTTTGGTAATA----TTTTAAGTGAAAAATGATCCTTATTACCATATGGCAAAATATACTGAAAATCTGAACTGTTAGACCAACACAGCTGTTAAATGCATAAATGTGGTTATGTGTTTAAAATGTTTTCTACTACAGCTATTTTGTGGCATTTC------TTAATCTCAGGCTATTAATCGGCAGTAACTGCAAGTTGTGGTGAGCATCACAGATGTAAGAAATTTGATCTCT--GGTAATTTACCTGGGAAGAAAATGGC chr4 + 94230402 60092862 60092861 60093132 60092862 60092861 60093132 271 AGTATTGTTGTTTAGTATGTGTTTAAAGTAATAATTTTTTTAAGTGTAAGCTGATCCCAGTCACCATATGGCAAAAAGCACTGCAAGTATGAAC------------ACAGCTGTTAAAGGCATAGCTGTGGCTGTGTGCTCTGCA-GTTTTGTGCTGAAGCCATTATGTGGTATCCCCAGCTATTCATCTCTCACTATTAATCAGCAATAAAAGTGACCTGTAGTGAGCGTCACAGATGCTGGAAATCTGATCTCTTCAGCATCGTACCTGCAGGGAAGACAGC .:.....:.:.x::.:..xx....xx:......----.........x..:x......:x:.:..............x::....x..:.x.....------------............x.....:x.....:.:....:.:x:x.-.....x.:..:x...:...x.....:..::.------..x.....xx:.........:...:...xx.::.x:...:......:.........:x:.....:........--:.:.x:x......x:::...:.::.. 33M4I57M12D39M1D31M6I73M2I26M 185/259 71.4% 271/94230402 0.0% 25/259 9.7% 34962516 NA +12595 chr4 + 190214555 95059476 95059475 95059831 356 TTTATAGGCACATGACATTC---TTTCAATGGGGGAATTTCTGGGGGATCGTTTTTGGGCTGATTTTATGCATATATACCAAACAGTTTATTCATAACATAGGAATATTAGTAGCTATTATGAATATTATTAATCTACTCTACT-TAACCTATTATGGTAAAAAAAACAATTTTCTATCTTTTTTTGTTAAA----------TAAACTTAATGACAAACATCTTGCAAATTAGATTTTCATA--TATTTCATCTCTTTCTTATGCTCAATTTAATCTATCAAAGCCACACATTGTAGAAGACATCTGGTATTGAGCTTAAGCAGCTGGGTTTCATTTGTA-AGGGTTTTGAGCAAATTT-TGGTGCTTGCCAAC chr4 + 94230402 60094859 60094858 60095232 60094859 60094858 60095232 374 TTTACAAACACTTGATACACCAGTGTCAGAGTCAGTGTTTGTGGTTGCTGCTTCTGGAATCAGTGGTTTGAGTAAAAGCTGAGCAGGCTGCAGGAAACATAGGCATCTCAGAGGCTCGTGTGAATACCACTGCTGTAACCTACCCTAACCTGGTTGGGTGAAAAATGTGGTTTCCTGTCTTCATTTGAAAAGAAGTGTTTTTCAGGCTTACTGACATGCATTCTGCAAATTTAATTTTCATAAATATTTCATCTCTTTCTTATGCTCAATTTAATCTATCAGAGCCACACAGTGTAGGAAACATATGGGATTGTGCTTAAGCAGCTGGGTTTCATTTGCAGAAGGTTTCTAGTAATTTTCTTGTTCTTGCCAGC ....:.::...x...:.:x.---.x...:x.xx:.x:...x...xx.x.xx..:.x.::::::.xx.x..x:..x.x:.::.:...x:.::xx:x........x..x.:..x:...xx.:......::.:.:x.x..x:....:-......:x.xx...:.....x::::...:..:....:x....xx..:----------:.::....x.....x:...::........x:.........--.....................................:.........x.....:.:....x...x....x........................:.-.:.....:x..:..x...-.x..x.......:. 20M3I121M1I47M10I40M2I96M1I18M1I14M 248/356 69.7% 374/94230402 0.0% 18/356 5.1% 34964617 NA +3346 chr4 + 190214555 95071619 95071618 95071681 63 TATATATGTGTGTTTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x:..x.....:.................:.xx..:..x::...:....:..x...:..:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 9237086 NA +3053 chr4 + 190214555 95071640 95071639 95071686 47 GTGTGTGTGTGTGTATATATATATATATATATATATATATATGAACT chr4 + 94230402 90314392 90314391 90314438 90314392 90314391 90314438 47 GTTTGTGTGTGTAAATATATTTATATATATACAGATAGATATGAACT ..x.........:x......x..........:.x...x......... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 4757248 NA +14978 chr4 + 190214555 95086433 95086432 95086933 501 ATTTGTTACTGATAACCTAACATTTAATTGTTTGTGGGCTGTCATAGTTTTCATGACATGACAAAAACTTACATGTGTTGATATTGAATATTTTATTGTTGTTCAACCTGTTGTATTGT--CAGTGAAACAGAACAGAGGAGGTGATACTGGAGAAAACATTAAAGGTTTACT----------AAGAAGTGGCAATGAGTTTGATGTTAGTAGAGGCCATGCCTTTGAACAATACTGCTAAGGAATAGATCTAATGAGATTTGGGATGTTT-TAAAAAATTAGTCAGCATTAGTGTAATATTCCTTCAGGGAGCATTTGTAATGCCCACAAGAATGTGTCGGTAGAGAGATCAGATTCCAGGCTAACCTTTATTTGCTTTCAGTAGTTGACATAACACACACCTGTGTGTTCTCTTTGCTAACCTCAAAATAGTTTTGAAAAGCTTTTGACATTTGGAAATATGA-AAGAGAGAAGATTTTGATTTGTTTTCTGGCAAGTAGGAAAAATAAATTC chr4 + 94230402 60119035 60119034 60119529 60119035 60119034 60119529 495 ATTTATTTATGGGAACATAACCTCTCTTAATCTCTG---TGTTGTAGTATTTAGGACATTACTAC------CGTATGATGAAACTGAATATTTT-----TATTGAATCTATTGTGTAGTACCAGTGGACCTGAATAGGAGAAGTGATACTAGAGATAACATAAAGGAGTTGCTTTTCTTCTTAGATAGGCATAAGGGAGTTCAATATTACCAGAAAA-ACAGCTTTGAACAATGCTGATAAAGAAGAGGTTTAATGAGGTTGGGGTTGTTTGTGGAAAATTAGTCTGCATTAGGGTAATATTCCTTCAGGGAGTGTTTATAATGCCTGCAGGAATGTGGAGG-GGAGGGATAGAATTTCAGTGCAACC-TCACAAGATTTCAGCTGCCAGCACACTGCGCACCTGTGTGTTCCCCACTCTGACCCCTGAGCTGCCTTGAAAGGC-GCTGGCATCTGTAAGCACAAGGAAAGATCAGGTTTTTAATTGTTG--TGACCACAAGAAAAAAAAAAGTC ....:..xx..:x...x....x.:.xx.x:.:.x..---...::....x..:.x.....x..x.x------.:.:..x...x.:..........-----.:..x..:..:....:.x..--.....:.x.x...:..::..:........:....x.....x..:.:x..:..----------:.x.:.::xx.:x.....::..:...x:...::x-.::x...........:...x...:...x..:.:.......:..x...x.....-.::..........x.......x...................::...:.......::..:.......xx..-:...:...x::...:...xx:....-.:.:xx.x......:x.::::..:.x::.:.............:.:x:x..:...:.x:.::x.::......:..-x:..:...:..x..::.::.-:.:...xx..:....x.x.....x--..:.x.xx..:.....x...x.. 36M3D26M6D23M5D20M2I52M10I34M1D53M1I70M1D25M1D75M1D20M1I24M2D23M 329/481 68.4% 495/94230402 0.0% 34/481 7.1% 34967398 NA +15973 chr4 + 190214555 95088076 95088075 95088442 367 TTATTACATTCACAGATTTTTCTTTTCAAAAGTAAGCTTCACTTGGTTTGACATCAGCAGCTTATTTCTTGCAATCTATTTAATTGAGACTTTTCTGCTGTTTATCCTAAAATGCAGATAAATGGCTTTCAGCACACTGTTTATAGTATAATAGCTCCTGAAGT--GAGTCAGCATTATCAGCTAGAGTCTCCATGTCATAACTAATGGTCTCTCTGCTTATACTTTCCTGCTAGTGAGGAGCCACTGAACTCCACAGAGA-CAGGAGCCTGGCATAGTTGGGGGTGGGTAGATTAT-TTTGATGGTGCCTATAGGACAAGGCTTTTTTCCTCCTTTATTGGTGTGAAATGAGAAGAGAAATATGTCCTTA chr4 + 94230402 60120112 60120111 60120475 60120112 60120111 60120475 364 TTATTAAATGCACACATTTTCCTTTTTGGAATTTAAAGTTGCTCAGTTTGGCATCTGTAGCTTATTTCTTGCAATCTGGTTAATTGAGTAGCTTCT-CTGTTTATCTTCAAATGTAGATAAATGGCTTTCAGAGCAGTGTTTATAGCTTAATAGTTCCTGAAATAAGAGTCAACATTATCTCCGAGACTCTACCAGTCATAACTAATGATCCCTCTGCTTACACTGTTGAGCAAGTAAGGAGACACTGAACCCAGCCGAGAGCAAGGGCCCTGT---GCTGTGGGAGGATAGTTTGTGTGTGATGGCGCCTAGCAGACAAGGC---TTTCATGGCTCACGAGTGTTAATTGGGAACCCAAATTTGTCCTCA ......x..x....x.....:.....:::..x.x.:xx.::..::.....:....x.:...................:x.........xxx:....-.........:.x.....:.................x:..x.........:x......:.......:.--......:.......xx.x...x...x.xx.............:..:.........:...x.:xx..x...:.....x........:.x:.x....-..:.:...:x.:---.:..x...x..:...x..:.-.x......:.....xx:........---....x.xx:.:.:x:....x..x..:...xxx....x......:. 96M1D67M2I95M1I12M3D20M1I25M3D45M 271/360 75.3% 364/94230402 0.0% 11/360 3.1% 34967964 NA +3261 chr4 + 190214555 95091189 95091188 95091285 97 TGGAAATGTTACATAACACACTGTGGTCAGTGAC--ATTTTTTTCATTCTTTTTCCTTTTTCTTTTCTTTCTTTTTTTCTTTTCTT--TTTTTTTTGTTTT chr4 + 94230402 63257002 63257001 63257097 63257002 63257001 63257097 96 TGAAGAAGTTGTATA---CAC-GTGGTCA-TGATCGATTTCTTCCATTCTTTTCAGTGCTCCATTTTTTTCTTTTTTTCTTTTTTTAGTCTTTTTAGCTTT ..:.:.x...::...---...-.......-...:--....:..:.........:xx.x:.:.x...:................:..--.:.....x.:... 15M3D3M1D7M1D4M2I50M2I13M 72/92 78.3% 96/94230402 0.0% 9/92 9.8% 31834187 NA +3097 chr4 + 190214555 95091197 95091196 95091300 104 TTACATAACACACTGTGGTCAGTGACATTTTTTTCATTCTTTTTCCTTTTTCTTTTCTTTCTTTTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 71033429 71033428 71033528 71033429 71033428 71033528 100 TTATGTAAAGCATAATGATTAAT----TCTCCTAATTTCTTTTTTTTTCTTTTTTTCTGTTGTCTGCTCTTTATTGCTCTTACTGTTTTGTTTCAGTCTGTTTT ...::...x:..:x:..:.:.:.----.:.::.xxx........::..:..:......x.:x.:.x:.....x:.x:.:..x:..........::x.:...... 23M4D77M 63/100 63.0% 100/94230402 0.0% 4/100 4.0% 24057768 NA +3185 chr4 + 190214555 95091218 95091217 95091282 65 GTGACATTTTTTTCATTCTTTTTCCTTTTTCTTTTCTTTCTTTTTTTCTTTTCTTTTTTTTTTGT chr4 + 94230402 82090594 82090593 82090658 82090594 82090593 82090658 65 GTGTGATTTTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTTGT ...xx.........x............:.x:.....:.::.....x.:x..x..x..x..x.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 13000624 NA +3220 chr4 + 190214555 95091244 95091243 95091307 64 TTTTCTTTTCTTTCTTTTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTG chr4 + 94230402 54623004 54623003 54623066 54623004 54623003 54623066 63 TCCTCTTTACTTTTTTTTTTT-TTAACTTTTTTTTTTGTTTTGCTTTGGTTGGTTGGTTTTTTG .::.....x....:.......-..xx.................:....x..x...xxx...... 21M1D42M 51/63 81.0% 63/94230402 0.0% 1/63 1.6% 40468240 NA +15649 chr4 + 190214555 95091277 95091276 95091682 406 TTTTGTTTTGTTTTGT---TTTGTTTTGTTTTTGACTCCTAGGTTTCTTTTCTTTTTTACCTTTCCACTGTCATATGCCATGGGTCCTGAACATAGCTCATTGCTTGACCGGAATAATGTCTCTTGCCAGCTTATAATCAAAGGGACTACTGAGAAAAACAGCTGAGCTGTATTAGGCAACCACAGTCTGGGCTGCATTTCTTAACTGCTGAATAACATATCACAGGTGCAGGATTAGTGCTGCCTACGGTGCTGGGCTTTTTAGTGGAAACCCCTAGC--AATTCTGTGCCTCCTCCT--CATGTCTCTCATCCTAGG-GAGCCTGGCAACCATATATCAAGCGTACAGAAATCAAAAGTGAGTAGTGGGAGAAGCTTTATATCTCACAGAG-ACTGTTTT-----TTTTTTCCCTCCA chr4 + 94230402 60123251 60123250 60123658 60123251 60123250 60123658 408 TTCTGTATTGCTCAGTGTCTCTACTTTATTTGCAATTCCAGGATTTTCTTTTTCTTTCACCTTTCTACTGTCATATCCTATGCAGCCTGAACGGTGCTTTGTACTTGACTGAAATAACATTGTTTGCCAGCTTACAATCAAAGGAAGGGCTGAGGAAAACAGCTGAGCTCTATTAGGCAGGGGCAGCCTGGACTACATTTCTTTGCTGCTGAATAACATGCCACAGGTGCAGGATTAGCCTAGCACACGATGCTGTGTTTT------------CTTAGCTGAGCTGTGTGCTACCTCCTCACATGACTCTCATCTTCGGAGAATCTGGTGGTGATGCAGTGTGCCTAAGGAAACTGCCTATAAGTAGATGGCTTAGCTTTGCAGCTCACAAAGCACTTCCCTTCCAATTTTTTCCCCCCA ..:...x...:.:x..---.:.::...:...x::.:...x:.:...::...:.:...:.......:..........x.:...x:x.......:xx...:xx.:......:.:.....::.:x:...........:.........:.xx:.....:..............x.........:xx:...:....:..:........x:..............::.................:x:x..x:...:.....x.:...------------.:....--.::.x.....:x......--....x........:.x..-..::....::::x..::.x::x..x..x:....:::xxx:.:.....xx..xxx......::.x......:..-...x:::.-----.........:... 16M3I242M12D6M2I18M2I18M1I73M1I8M5I13M 279/394 70.8% 408/94230402 0.0% 26/394 6.6% 34968026 NA +3325 chr4 + 190214555 95094366 95094365 95094477 112 TAAAATGAAGCAAAAGAAAGAGGAATTGAGGAAGAGGAGAGCCAGGAAGGG-------GAAAAGATAATAGGGGAGAAAAGGAAAGGAAGACAAATAGAAACGGGAGATAAAGGAGTAG chr4 + 94230402 93291149 93291148 93291264 93291149 93291148 93291264 116 TAAAATG---CAAAAGCGGAAGGAAACGGGCAACGCCAGAGGTGGGGACGGAGCAAAGGGAAAGATAATCAGAGGGAAAAGGAGGGGAAAGCAATCAGAGTTGGGGAGCAGAGAGGCAG .......---......x:::.....x:.:.x..x:xx....x::..:.x..-------.:.........x:.:.:........::....::...x:...:x:...::::.:..::.:.. 7M3D41M7I61M 70/109 64.2% 116/94230402 0.0% 10/109 9.2% 1803217 NA +3522 chr4 + 190214555 95097234 95097233 95097291 58 GAGGGAAGAAGAGAGAAGAGAGGGGAGGGAGGGACAAAGGAATAAAAGAAAAAAATGG chr4 + 94230402 32265571 32265570 32265628 32265571 32265570 32265628 58 GAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAG ..:.......:.....:......:..........x:......x.x..x.:.:...::. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 62831663 NA +7749 chr4 + 190214555 95104410 95104409 95104574 165 AACTTCCTTGATAACATGCTTTTGCGAAGTGCAGGAAAATTAAATGTGGGCACCAAGAAAGAGGATGGTGAGAGTACAGCCCCCACCCCCCGTCCAAAGGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGACTCAGTCAACAATATTTGCAGGTTGGTG chr4 + 94230402 60132037 60132036 60132201 60132037 60132036 60132201 165 AGTTTTCTGGACAAGATGCCCTTGCTAAGCTCCAGCAAGTTGAGCGTGGAGAGCAGAAAAGAAGATGGTGAGGGCACAGCACCTGCCCCTCCACAGAAGAAGCTGTCATGTCAGTGCCACCACCATTGTCCTGAGGACTCAGTCAACAGCACCTGCAGGTTTGTG .::..:..x..:..x....::....x...:x.x:.x..:..:.::....:x.x..::.....:.........:.:.....x..::....:.xx.x:...:xx:..:xx...x.:.................x..:.............::.::........x... 165M 115/165 69.7% 165/94230402 0.0% 0/165 0.0% 34972373 NA +6512 chr4 + 190214555 95114690 95114689 95114831 142 TGTTTCTCACTTTG-------------------CTTGTTTGATCTTCAGCACAGACGGATATTGTTTCACGATGATAGAAGAGGATGACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAGGACTAGAAGGCTCAGATTTTCAGTGTCGGGTAAGGTAG chr4 + 94230402 60140888 60140887 60141048 60140888 60140887 60141048 161 TGTTTTTCACTTCGGAACCTCTTACTGATTCATTCTTTTCAATTCTCAGCACTGATGGCTACTGCTTCACCATAATAGAAGAAGATGATTCTGGTGGACATTTGGTCACCAAAGGATGTCTAGGATTAGAGGGCTCGGACTTCCAATGTCGGGTAAGAAAG .....:......:.-------------------::.x..::..::.......x..:..x..:..:.....x..:........:.....:.....xxx:.x.x.......:xxx..x..:......:....:.....:..:..:..:...........:x.. 14M19I128M 104/142 73.2% 161/94230402 0.0% 19/142 13.4% 34973802 NA +3058 chr4 + 190214555 95116594 95116593 95116633 40 TTTGTTTTGCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 6554016 6554015 6554055 6554016 6554015 6554055 40 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTT ......x.x..:...............:............ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 88562578 NA +3011 chr4 + 190214555 95116604 95116603 95116652 49 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTGAGACAGGGTCTTGCTCTG chr4 + 94230402 38525380 38525379 38525428 38525380 38525379 38525428 49 TCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTG .:.:.:......:......:...........::....x:.:...:.:.. 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 56591224 NA +13109 chr4 + 190214555 95118463 95118462 95119077 615 CATTTTAAGCAGTTACAAGCTAATTATCGGAGAGGTGATAGTAG-TGACAGAATGCAGTTTTGTTGTGAAACC---ACTGGTGATTCTTAACT---TGCCTCTCAGAGTGAACCAGACTTCGCCCGGGAGTTCTCAGTTCTACTTCCCAGAGCAGTTGGAGTGACAGCGCAGGTAGAAATCTGCTGTCCTGGAGAGAGCTGAAAGCTGTGGGCTCTGCTCTTTTCCTGATAGGTATC-TGGAACTGTTCACTTTCTGAGACTCTGGCTGTGGCTTGAATGTTTACATTGTTAGTGCTCCGAGCACAGGTAATGGCAGATTAAAACATGACCAGCGTGACCAGCAGAAACAAAAGGTTTATTGATAAGGATCACCTATTC---ATGAGAGAAGACAAGGAGGCTGCCGGGGATAGGGTTATGGGGCAAATAAAAGGCAAATGGGAAGGTAAAGCTAGCCTTAAAT--AAAGTGCTTGATGGAAAGGAAAGAATCCCTT--GATCCTTCTGGTCTCATTGCTCTCATAAATCAGAAATATAAT-----------AAGATAAGT-AATAC--ACAGTGTTCTTGCAGCTCAGGGTGTATCCTGTATCTTGCATTTACATGGAAAGTAAAAGGCAGTGAAGCTTGGAG chr4 + 94230402 60146238 60146237 60146820 60146238 60146237 60146820 583 CATCTTAAACTGTTACAAACCACATATTTTAGAGGGAA--GTGGCTGGCAGACC-CAGGCTGCTTATGGAGCATGAAATAGAGCCTTCAGACCACATGGTCATAGGATAGGGCTGGGTTCCCCCAGTGGGCTCTCGATTTCAGCTCC------------------AGCCCAGGTAGAAATCTGCCA--CTGCAG-----TGGGAACGACGGGCTCTGGTGTTTTCCTGATAGACATCGTGTAGGTGTCCCCTTTCAAAAGCATTGGCTGTAGCTTGAATGTTTACATTGTTAATGCTCCGGGTGCAGGTAATGGCAGGTTAAAACAAGACCAACATGAT---------CAAAAGGTGCACTGGGAGGTAATCTCTGTTTGTAATGAAAAAGGAAAGGGA-------AGGAATAGT----TTGGGCACAAAAACGG--AGGGAGAAATTGGATCT----TTAAACTAAAAGAGCCTGACAGTAAGCTAAGAGTCCCTTAGGAATCTCCTTGTCTCATTACCCTTGTAAATCTGAAATGTAGTAGCACTATTCCAGGATGAGTCGATGAGGATAGAGTTCTTGCATTTTATGATGTGCTC-------GGCATTAGCGTGAAAGATGCAAGGTGGCATGACTGGGAG ...:....:.x.......:.:.xx...:xx.....x:.--..:.-..:....x:-...x:.xx..:..:.:.x---.x.:.x.x:.::x:..:---..x::x.x:..xx.::.::.::.:.x..x.x.:.:....::..::.x:...------------------...x...............::--...x..-----..::.:.x::........x.x............::...-..x.:x...:.x.....x:.::.x:.......:.....................:.......:.::.............:........x.....:.:...:---------........x:.:..:x.:.x.x:x:..:..:---....:.:.:..x.:...-------:..:....x----.x.....x.x...x..--.:x.:...:x.::.x..----.....:--....x..:...::.x...xx....:......--..x:..:..x........:.:..::......x.....:..:.-----------.:...:...-:..:x--.:..x.........x:.:.x.:...:::.-------x.....x:.:..:..::.:x....::.::x::..x.... 38M2D4M1I9M1D18M3I17M3I51M18D21M2D6M5D38M1I101M9D31M3I17M7D9M4D16M2D17M4D6M2I31M2I42M11I9M1I5M2I29M7D39M 374/554 67.5% 583/94230402 0.0% 90/554 16.2% 34972225 NA +3352 chr4 + 190214555 95120652 95120651 95120771 120 TTCCTTCCTTCCTTCTTCTTTCTTTTCTTTTCTTTCTTTCTTTCT-CTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTTCTGTCTGTCTCTCTCTTTCTCTCTCTCTCTCCCTCCCTT chr4 + 94230402 63697118 63697117 63697238 63697118 63697117 63697238 121 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ..:x.....::.:.:.:.xx.x......:..:...:::..x....-..x....xx...:.x...:xxx.::.:x..:.:.:x.x....x......:.:.::.:...:...::.::.::x.. 45M1I75M 72/120 60.0% 121/94230402 0.0% 1/120 0.8% 31423534 NA +3435 chr4 + 190214555 95120665 95120664 95120734 70 TCTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTTCT chr4 + 94230402 69163347 69163346 69163416 69163347 69163346 69163416 70 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCT .:.::......x..............:..:.:..::.x...:.x......x..x:.:::...x...x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 25957318 NA +10000 chr4 + 190214555 95124981 95124980 95125145 165 AGGTATAAAAGACAAGAAACCAGACCTCGATACAGCATTGGGTTAGAACAGGATGAAACTTACATTCCTCCTGGAGAATCCCTGAGAGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGGATCAGGCCTCCCTCTGCTGGTATGAGAAGAACACATCTTGAAT chr4 + 94230402 60148798 60148797 60148962 60148798 60148797 60148962 165 AGGTACAAGCGGCAAGAAGCCAGGCCCCGCTACAGCATCGGGCTGGAGCAGGACGAGACCTACATTCCCCCTGGAGAATCCCTGAAGGATCTGATCGAGCAGTCCCAGAGCTCAGGCAGCGGCTCCGGGCTCCCTCTCCTGGTAAGGAAACAACATTATCTGAAT .....:..:x.:......:....:..:..x........:...:.:..:.....:..:..:........:................::..::.:..:........:...........x..:..x..x..x........x......x.::..x....:xx::..... 165M 127/165 77.0% 165/94230402 0.0% 0/165 0.0% 34976183 NA +17396 chr4 + 190214555 95129835 95129834 95130064 230 CTAACAGTGTGTTTTGGGATTTCACAGGTCCAAAGGACTATAGCTAAGCAGATTCAGATGGTGAAACAGATTGGAAAAGGTCGCTATGGGGAAGTTTGGATGGGAAAGTGGCGTGGCGAAAAGGTAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCAGCTGGTTCAGAGAGACAGAAATATATCAGACAGTGTTGATGAGGCATGAAAACATTTTGGGTGAGTAAAA chr4 + 94230402 60153686 60153685 60153915 60153686 60153685 60153915 230 CTCACTGTGAGTCTTGGCATTTTACAGGTTCAAAGGACCATAGCAAAACAGATTCAGATGGTAAAACAGATTGGAAAAGGTCGCTATGGGGAAGTCTGGATGGGAAAGTGGCGTGGCGAAAAGGTAGCTGTCAAAGTGTTTTTTACCACGGAGGAGGCCAGCTGGTTCAGAGAAACAGAAATCTACCAAACTGTCCTGATGAGGCATGAAAATATTCTCGGTGAGTGAAA ..x..x...x..:....x....:......:........:.....x..:..............:................................:...................................x........:..:.....:.....:.................:........x..:..:..x..x:................:...:.x.......:... 230M 202/230 87.8% 230/94230402 0.0% 0/230 0.0% 34976149 NA +21400 chr4 + 190214555 95131095 95131094 95131519 425 AGGAAATTGAATGAAATGCTAAACAAAAATTATCTATGACAAAGAATGATGTTTGAGAATATGAATTATTCCTGATACTATTTGGAAAACACTAAACCTTTTCATCTTTTTTCCTTTTAGGTTTCATTGCTGCAGATATCAAAGGGACAGGGTCCTGGACCCAGTTGTACCTAATCACAGACTATCATGAAAATGGTTCCCTTTATGATTATCTGAAGTCCACCACCCTAGACGCTAAATCAATGCTGAAGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATTTACACACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAGTAAAAACATTCTGGTGAAGAAAAATGGAACTTGCTGTATTGCTGACCTGGGCCTGGCTGTTAAATTTATTAGGTTAGTA chr4 + 94230402 60154211 60154210 60154626 60154211 60154210 60154626 416 AAGAAATTGAGTATGTTGTTAAAATAAAAA---ATATGGAAGTGGCTGACAGTTCAGACTCCTGAGCAGTC--AAAAACACCTTGAGAAGAATTAACCTGCTATTGCTTTTTTC----AGGATTCATTGCGGCAGACATTAAAGGCACAGGCTCTTGGACCCAACTGTATCTCATCACTGACTATCATGAGAATGGCTCCCTTTACGATTACCTAAAATCCACCACCCTGGACACAAAAGGCATGCTAAAATTGGCTTACTCCTCTGTTAGTGGCTTGTGCCACCTACATACAGAGATCTTCAGTACCCAAGGCAAACCGGCTATTGCCCACCGTGATCTAAAAAGTAAGAACATCCTGGTGAAAAAGAACGGAACCTGCTGTATAGCAGATTTGGGCTTGGCTGTTAAATTTATTAGGTGAGTA .:........:.:x:x..:....xx....x---x....:x.:x.:x...::x..x...x.x:x:.x:.x..--:.x.x:.::.x..:..x.x.x.....x:.xx.x:.....:.----...x........x.....:..:.....x.....x..:........::....:..x.....x...........:.....:........:.....:..:..:...........:...:.x...xxx.....:..:..:..:.....:.....:........:..:..::....:.....:.....:.....:...........:..x........:..x.....:........:.....:........:..:..:.....:........x..x..::.....:.....................x.... 30M3D38M2D41M4D307M 314/416 75.5% 416/94230402 0.0% 9/416 2.2% 34976884 NA +14046 chr4 + 190214555 95148555 95148554 95148944 390 TTCATTGGCTTTTAACCTGTAAATATTTAATATAGCTTTTGGCAAGAAATATTCTTTAAGAAATTGTTTTTATTCCCTGGAAAGTTTTTCTTTTCCACTTTTCACTAACTAAA----------------GCCATTGTTTCAGAATCACCTTGATTCG------------------TTTTTGTTG-GTCCTCTTCAATGC--------------TGTAATGC------TTTGCTTTACTTTTTCCTTAGTGATACAAATGAAGTTGACATACCACCTAACACTCGAGTTGGCACCAAACGCTATATGCCTCCAGAAGTGTTGGACGAGAGCTTGAACAGAAATCACTTCCAGTCTTACATCATGGCTGACATGTATAGTTTTGGCCTCATCCTTTGGGAGGTTGCTAGGAGATGTGTATCAGGAGGTAAGAAACAGTGCTGTCTTT chr4 + 94230402 60156661 60156660 60157103 60156661 60156660 60157103 443 TCCATTGTGGTTCTGCATTTGGATGCTTAATACTGCCTCAGGCGAGT--CAGCCTTTTAGGAAGAGTTGTGTTCACACTAAGAGGCTTTCTTTTTAAGGTTTGTTCCATTAAGATTATGCACTACTTTTGACATTGTTTGAGAGTGGATGTGGTCTGAATTCACTACTTCTCCCTTCTCAGTTGCTTCCTTTTCAATCTACTTTTATAGCATGTATGATGCCCTTTTTTTTCCTTCTCTTTATTTTAGTGATACAAATGAGGTAGACATCCCTCCAAACACCCGCGTAGGAACAAAACGCTATATGCCTCCTGAGGTGCTGGATGAAAGCTTGAACAGAAATCACTTTCAGTCGTACATCATGGCTGATATGTACAGCTTTGGACTCATCCTTTGGGAGATAGCCAGGAGATGTGTGTCAGGAGGTAAATGACAATCATACCTTT .:.....xxx..:x:.x.x.::..::......:x..:.:x...:..x--:.x:....x..:..xx...x.xx.:x.x:x:.:..x:........:x.xx...xx::x.:...:----------------.x........x...:.x:x:x..:.::.------------------.:.:x....-x....:......x:--------------.:.:....------...x.:..x::...x::................:..x.....x..x..x.....:..x..x..x..x.................x..:...:....:..:....................:.....x..............:.....:..:.....x...............:.x..:...........:...........:x:...:.xx.::.... 47M2D64M16I28M18I9M1I14M14I8M6I218M 277/388 71.4% 443/94230402 0.0% 57/388 14.7% 34991894 NA +10557 chr4 + 190214555 95152637 95152636 95152776 140 TTTTAGGTATAGTGGAAGAATACCAGCTTCCTTATCATGACCTAGTGCCCAGTGACCCCTCTTATGAGGACATGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTGATGAGGTA chr4 + 94230402 60159237 60159236 60159376 60159237 60159236 60159376 140 TTTCAGGAATAGTGGAAGAATACCAGCTCCCATATCACGACCTTGTCCCCAGTGACCCCTCCTACGAGGACATGAGGGAGATTGTGTGCATCAAAAGGCTACGTCCTTCATTCCCCAACAGATGGAGCAGCGATGAGGTA ...:...x....................:..x.....:.....x..x..............:..:.............................:.:.:....:..:........x...x.:........:......... 140M 122/140 87.1% 140/94230402 0.0% 0/140 0.0% 34993400 NA +16063 chr4 + 190214555 95154008 95154007 95155319 1312 TCTTCACTGAGGATTTCTTATGAAGTGAAATTGTACTTTTCAATAGGAAGACCAATAATTGATGTACCACA---GGAGAAAGTTTTAGTGATGCTGTGCACAGGTCATTAATCTTGTTAAATGGTGCAGTGTGATGCTATTA------------CTGCAGCAGACAGCTATGATTTAGGAATAACTGTGTTTGTTTGCATAGTATGGAATTAGATAAAAGATTAAAACTTATCAAGTGTTATAAACAATCTGGGAGTATTGAGT----GGAATACAGACTCCCTGGGT-ATTTTTAT----GTTTGCTTAACACTAATTTCA--AAGACACCTTTCTACAATCAGCAGAACC----------------------------ACCTGCTTGTT-TCTATCACAAAGAAGACATGAACATCTGTTTTAGTCATATATAATTTTGCATGAAAAAAGCTTACAGAATTTTACTTCTACATGGTTTTAAGGGTA------CCTTTTAAAAA--------TATATTCAAACTTAATGAACCTAAAACTAAAAAGCTACATTGTA-------ACAGGTGCCAGCCTTGCAGATGATACATTTTTCTAACATTTCTCTTCCTCAGTGTCTAAGGCAGATGGGAAAACTCATGACAGAATGCTGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGCGGGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCAGGACATTAAACTCTGATAGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTAC--TCTTCTGTTTGTGGGCAGAGCAAAAGACAT---------CAAATAAGCATCCACAGTACAAGCCT-----TGAACATCGTCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAGG-GAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGA---------AGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAAGCCCTGTATT------------------TTGTGATTGCCTTTTTTTTTTTTTAAGATGC----TTTCATTTTGCCAAAATAAAACAGATAATGTGGATGGTTTAAGGGT-TATAGTATTATAGTTTAAATAATAACAACAAAATTCTTCCCAGGAACTCTGCTGGA-AGGTAAATTAAAATACTTGTTTTTCCATTGGTAA-AATATTGTTGCACTC-----TGTGAACCAAAAGACAGTCTAAG----TTGGAGGACATAGAACGGAACTCATCTTAAACATACTCCCCACCCCGTCTTGGCCTCCTCAGACCACTTTGGCCATCCCTGCATTTGGGG-CCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGTCTAGGACCACATTTG------------GAATTCCTGCAGGTG chr4 + 94230402 60160176 60160175 60161524 60160176 60160175 60161524 1349 TCCCCACTGAGAGTCTGTAATGAAGCAACATTGTGCTGGTGGAATCAGAGACAAACTGTTGATGTACCAAACTTGCTGACTGCAAAAGCGATTCTATGGAGGGGTCATTAATCACATTAATTGGTACAGCTTCATGCTATAAGGTCTTCTACAATCACAGAAGAAAGCTGTCATTTGGGAACAGCACCCTTTAGATGAATGTTTTGAAGGCAGATGAACATTTGAGGTTATGCAAGT--TGTGAATAATTTGGGAATGTGAGGGAAAAGTAAAACAGCCTCTCTGGGTGACTTGTGCCACAGCCTGTGGGAAGGTGTGTCCAGGAATGCAGCCTCATGGCAGCTGCTGAGCCTTCAGGCAGGGCGGTCACACCAGAGGGTACATGTTTGGTGTCTATCTCTAGGAGGGC------------TTTAGT-----------GTGTTTGGAAGGAGGTGCTAGG----------TGCAGGGC---AAGGCTATGTGGTCCTTTTGAAAGCCAGCATCTATGTCT---CTTGGCTGCCTTAGAAC----AGACTTCCCTTTAGTTGACCACCAGCTGCAGTCTCATCTTCTACTGATTTCCCTTCCATTTCCCCTCA-CAGTGCCTGCGGCAGATGGGGAAGCTCATGATGGAGTGCTGGGCCCATAACCCTGCATCCCGGCTCACAGCCCTACGAGTCAAAAAAACACTTGCCAAAATGTCAGAGTCGCAGGACATTAAGCTCTGAT---GGAGCAAAAACAGCTCCTTCTCGTGAAGACCCATGGAAACAGACTTTCTCTTGCAGGCAG-----AAGTCATGGAGAGGTGCTGATAAGTACCCTGAGTGCAGTCATATTTAAGAGCAACTGTTTGTTTGACAG----------------CTTTGAGGAGACTGTTCTTGGCAAAATCAGCTGAATTTTGGCATGCAAGGTTGGGAGAGGCTTATCTGCCCTTGTTTACA-CAGGGATATACAGTTTTAGTAACTGGTTTAAG--GTTATGCATGTTGCTTTCCGTGAAAGCCACttattattttattattattgttattattattattTTGATTGTTTTAAAAGATACTGCTTTAAATTTTATGAAAATAAAACCTTTGGT-TAGAAGTTAAAAAGATGTATATTGTTACA-TTAAAAGAAGAAAAAAAAAGGAT------GAAACTGTGCTGAAGATGTAAGCAAAGCGAC----TTTCTCATTTATAATGAAACTCTTGCACTCCAGCATTTAGAAAAAGAGAGGGTCTGAGCACCTCGGAGAAGCTACAGTGGAAATCATCCTGAAAG------CCACCTC--CCTGGCATCGTCCCACAGCCCTGTGCA------CGTTGGGGGACTGTCCTGGCGCAGAGAGAGC-CTGGTTACA---------TCTCT---ACTATATTGGATGTGGGAGGCAGAATTCTTGCAGGTG ..::.......::.:.x.x......::.x.....:..xx.x:.xxx::....x..:x:...........x.---.xx..xx.:xxx..:...x..:..x.x:...........x::....x....:...:x.x.......x.------------:::...x...x....:.x....:....:.:.xx:x...:xx..x..:x.x..:.:x:....:..x:x..:.:::.xxx.....--.:.:..:...:.....:.:.x::.x----.x..x....x...:......-.:..x.::----.::..:xx:.x:x.:xx.:..--..x:..x.:.:x.:xx.x.x..x..:..----------------------------..x..:...x.-......x.x.:..:.:.------------......-----------x..:x..:..::..x.xx:..:----------.:..x..:---....x..------......:...:--------...:.::---...:::x:x.:..:...----.::..x.x:.x..-------..x:.:xx...:..:::xxx:x.:xx....::..xx......:.:..x-.....:..:x..........:..:.......::..:........:..:..:........xx....x........:..:..:..:..........................x...........:.......---:...x....::.:x:x::...xxx...::..x.::.:x..--x...::x:...::.....-----...x...---------.x:.....:.:..xx...:..:x.x.-----x..:..x.xx::..:..xx...----------------..:.x...-..x:.x:..x......:x...xx:.::.::x:x.---------:......::.x...:::x::.....::.-x.x...x.x..x.:..x:......x...:...--:.x...............::x.......x:x....------------------..:.x...:::..xx..x....xx.....:.----..xx.....::x..........xxx.::.-.:..x.x.xx..:.:.-....x.:...:.-..x...x..x..x..x...:xx:------.:....x.....:.-.x....::x..:xx..----...::....x:...-:.x.:.x........-----.x.::.xx..:...x:....:..----.:....:.xx..x.::....x.....:.:..x:------.....:.--.:....x..x..xx..x:.::..xx..------.:..x....-.:.::x...::xx.x..:x..-....x....---------.x...---..:.:...x.------------......:........ 71M3I68M12I83M2D25M4I20M1I8M4I21M2I28M28I11M1I17M12D6M11D22M10D8M3D7M6I11M8I7M3D17M4D13M7I48M1D130M3D40M2I18M5D7M9I26M5I22M16D8M1I34M9I28M1D32M2D35M18I31M4I29M1D16M1I12M1D23M6D14M1I16M4D14M1I15M5I23M4I33M6D7M2D27M6D9M1I21M1D9M9D5M3D10M12I15M 779/1200 64.9% 1349/94230402 0.0% 261/1200 21.8% 34993832 NA +14896 chr4 + 190214555 95157539 95157538 95158491 953 CAAAGGAATCCTAAATTATTAGTTGTTAG-----ATAAGTTTTGTATGCTAAGATATTCAGGTTTATAGTTTATGTATGTGTGTATATATATAAATATATATGTATATATAAATAT-TATGTTCAGTTTGGAGTCTGGCACAACTCCATTATGTGGATTAGAGAGTAAGATATTATGGATGATAAAGTACTAAATGAAACATAATATTTATTTATAAAAGTGTGTAGATTGTTAAATCACAAAAAGAGTGCTAT----GACCAT---------------------TATGTATGAGGAAACAGGCCTTTGACCTCCTGGAAAGCA------CTGCTCAAAAGTCATTAG-TGCCCATTT---------------------------------TTGAATTCCCCA------------------AACAGAAAG----CTTCTTA------GAAAACATGCTGAGATTTTATTTACAGGGAATTCTTT-------GACACATTTCAATTGGTG--TGTA--GTCAAGTATAGCAAGTACTTAATAATGA-------CTGAATTTCATGTTCCTACAGTCATAC------ATATTCAT-----------TAGAAGTTTTATGTTGTTGGTCTGATCTGATTCTT----------CTTTGTTTGTGGGTGGAACGGCACTGAGAGAAGTA---------------------------------TAGTTTTTTAAACTTGAACATGTTCAG--TAGTTAC--ATTGCCTTAGAAAA-----CCCAGACACATAGCAGTGGAAATGAAAGAAATGGCATCAGAAGTGACTTAATTTAGCAATTGTGATTCCTCTTGTAAAACAAAACAAAAAAACAATGCCATATTTTTTGGAGAAAAGTTGGCAATATAGGGGTTTCGTTGTCTGTTTCACAAGAAGACTCATT--TGTTCTTTTGGGGGAACCAGTGCCTTACAGATTTTGTATATACTGTAATTATTCAGGACTAGGGAACAAACAATTGTATTGTATTTGTTACAGATTGTATATGGCTTTGTTTTAACATTCCCCTAAATAAAATGGCTTCATTCTCCCCTTGGAAAAAAACATGACTGTTATGTTATAGTTGTGCTTATTTATTTATTTATTT chr4 + 94230402 60163210 60163209 60164288 60163210 60163209 60164288 1079 CAGAAGAGATCTGAGATACTGGTTGATAGGTTACATAAAGTGTCTATGTTAAG-TGTTCAAGTTAAT-GTTTAGGGCTTtatatatatatatatatatatacatatatatatatatatatatTCAGCTGGGTGTCTGGAATAACTCCAGTATGTGGATTA-AGAGTAAAATATTATGGATGGTAAAGCACTAAATAAAACATAATATTTATTTATGAAAATGCATA-ACTGACAAATCACTGCAACGGTGCTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACACCTGA-------GAAAGCAGAGGGTCTGCGTTTATGTGAGTAACTGCTCATTTTCTTCTTAGACCCAAAAGGCTGAATTTTCCCCCTCGAATTTCCTACCCACTATAATCAATGACACTATAAAGGTGTATTCCTAAGACCTGAAAATGGCTTAAGGCAAGCTTGGAAGTCATTTCTTTTAGCACAGTGACATTTGAGTTGCTGGCTGCAAGGTTGACTTTATGCAATACTCTA-AATGAAGTTATTACGGTTTTAAGATGCCCAGTGACACACCTTAGTACATTTATTTTACCATTTATAGATGTACAATGGCATT-TCCAGATTTGGTAGTTTCACAGCACGCGTTGATTTGGGCTTGGAAGTCAGTGGTAAAATTAATTGGGGTTTTAATGCCTTCAGGTTTGGTAATCCAGTTTTCTAA--TGGGGAAGGTTTAGTTTAGTGACTTACTGGCATAGACAAGATGGCACAGGGAGACGAGGGAAAAAATAGAACAAAGAGGAAGAG-AGAGATGCCATCTAGCAACTGCTATCCTTTCTCTAGCATACA-------------GTTATTTCTATTAAAGAAAAGGTTGATGTAAAG-------------------ACTAAGAAACTAATTTGTGTTCTTTTTTGAGAACCAGTGCCTTATTAAACCTGTAAATACTGTAATTA-GAAAGCCTGGGGAACACACTGTTCTGTTGTATTTGTT-CAAATTGTATATGGA--TGTTTTAACATTCCCCCAAATAAAATTGTTTCCATCTCCCCATGAAAGAGA---------TTGCTTTTTATTTCTATTTACTT-TTCATGTGTTT ..:.:..:x:..:.:x..:.:....x...-----....:x.x.x....:....-.:....:...x..-.....x.xx.x.:.:..........x.......::........x....-...:.....:.x..x......x.:.......x...........-.......:............:.....:.......:...................:...:..::..-.:..x:.......x:x..x:.......----..xx..---------------------...:x...x...:...x:.x::...-------.......------....x:xx.x..x.x..:-...:.....---------------------------------.:.....:..:.------------------.x:.x....----x...:..------.....::xx:.:..::xxxx..x:x..xx.x......-------.xx......x.:...x..--..:.--..::.x.x..xxx.:....:x.-.....-------x:.:x...x.x:.x..:.xx.x..:..------.:...:..-----------....x..x:x...x::..-x:.x...:..:.xx..----------.x...x..xx..x.x.:.x.x..x..:x.:..x..---------------------------------:......:...--.x.::x.x...:..--....x..--.:..x.x....x..-----.x...:x.x.:::x:.x::....::..x...x:.x.xx..-..x..:x:x..:......:..:x..:.:.::.x..:x.:.x.-------------.::..x.:.x..::.......x.x.xx:..x..-------------------..x.::.:...x...--.........xx.:..............:x:.x::....x............-xx.:.x..:.......x..x:..x.:...........-..:...........x--................:.........x.:...xx.......x..:..:.:.---------..::x..x..x..x.::...:..-..:..x.:... 29M5I19M1D13M1D48M1I43M1D65M1D27M4I6M21I25M7D7M6I18M1I9M33I12M18I9M4I7M6I37M7I18M2I4M2I22M1D5M7I27M6I8M11I18M1D16M10I35M33I11M2D14M2I7M2I14M5I40M1D42M13D33M19D15M2I51M1D37M1D15M2D51M9D23M1D11M 622/891 69.8% 1079/94230402 0.0% 250/891 28.1% 34994329 NA +3390 chr4 + 190214555 95157561 95157560 95157646 86 TTGTTAGATAAGTTTTGTATGCTAAGATATTCAGGTTTATAGTTTATGTATGTGTGTATATATATAAATATATATGTATATATAAA chr4 + 94230402 90314352 90314351 90314436 90314352 90314351 90314436 85 TTGTTA-ATAAGCTTAATATAAGAAGAGAAACAAATGTATAGTTTGTGTGTGTAAATATATTTATATATATACAGATAGATATGAA ......-.....:..x:...:xx....x.xx..::.x........:...:...:x:.....x....x.....:.x:..x....:.. 6M1D79M 61/85 71.8% 85/94230402 0.0% 1/85 1.2% 4843209 NA +3421 chr4 + 190214555 95160435 95160434 95160533 99 TTTCTTTCTTTTCTTTCT--------TTCCTTCCTCTGTTTTCTTTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTC chr4 + 94230402 49829809 49829808 49829908 49829809 49829808 49829908 100 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGG-CTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCT------CCCCCCCCCTCCCTC .....:...xx.:.....--------....x.::.....xx-...x.....x:::x.......::....:.:.......:...:..------.:...:......... 18M8I15M1D44M6D15M 69/92 75.0% 100/94230402 0.0% 15/92 16.3% 45330626 NA +3110 chr4 + 190214555 95160465 95160464 95160529 65 TTTTCTTTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCCCTCCCTCCCTCCCTCCCTC chr4 + 94230402 45957267 45957266 45957331 45957267 45957266 45957331 65 TTTTCTTTTCCTTCCTCCTTTCTGCTCTGTCGCTGCTTTTCTTTACCCCCTTCATTCTCTCCTTC .........::...:.:......x:...x.:x:.x::.......x..:..:..x:..:....:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 49203198 NA +3218 chr4 + 190214555 95160472 95160471 95160579 108 TTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTT--------CTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCC chr4 + 94230402 89201223 89201222 89201338 89201223 89201222 89201338 116 TTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTCTCC ....xx..x.:.........:...:...:....--------....:.:.x::xx....:......:::.:::.:.x.x..:.:.:.:...x:....x:::xx.x.:..x.::.... 33M8I75M 67/108 62.0% 116/94230402 0.0% 8/108 7.4% 5959249 NA +3318 chr4 + 190214555 95160487 95160486 95160545 59 TTTTCTTTTCTTTTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTT chr4 + 94230402 7218319 7218318 7218377 7218319 7218318 7218377 59 TTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT ....:....::...:x.:.......:..::...:......::...:.x:..:.....:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 87942168 NA +3046 chr4 + 190214555 95160629 95160628 95160686 58 TCCCTTCCCTTCTTTCTTTCTTTCTTCTTTTTCTTTTTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 86518997 86518996 86519054 86518997 86518996 86519054 58 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT .::.......:.:.:::..x....xx:.............:.......:.:.x:.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 8641632 NA +3247 chr4 + 190214555 95160637 95160636 95160710 74 CTTCTTTCTTTCTTTCTTCTTTTTCTTTT------TTTCTTTCTTTCTTTCTTTTTTTTTTTTGACAAGGTCTCACTCTG chr4 + 94230402 61949727 61949726 61949806 61949727 61949726 61949806 80 CTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTG ..:.....x.x..::x.:...x......:------..::........................::::::x.:.:...:.. 29M6I45M 53/74 71.6% 80/94230402 0.0% 6/74 8.1% 33210910 NA +13276 chr4 + 190214555 95162507 95162506 95162821 315 GTTGCTTATAAATATAATTTATTACCTGTTTAAAAATTCTTTCTTACATTTTGTACATGTT-GGCTGACAGAATAAATGCAGGCAATTTACAAACCAAGGGGACTGCAGGGAAAATCAGGATTGGCAGCCAGGGAGAGAAAAGAGGCACACCCGGAGCTGGTATCCCTCACCTCCACCACTCAGCAAGGCGCCGGACAGATATCCGGAGGGCACTCTGCCTCTGCCGGGGGGTTTTTTTAGAAAAGGAATTGCATAGAAGATACAGCAAGAGGGAACTCCACAACAACAAAAGTGTTCCATATCGGAAAAGCCAAG chr4 + 94230402 60166987 60166986 60167275 60166987 60166986 60167275 289 GTTGCTTATAAATATAATTTATTACCTGTTTAAAAATTCTTTCTTACACTTTGTACATGTCAGGCTGACAGAATAAATGCAGGC-ATTTACAAACAGAGGG------AAGGAAAAAAAGG-----------GAGGGGGGTAAGAGGCACACTCAGAACTAGTAAACCACACCTCCACTGTACAGCAA-------TACAAATAATGCAATGGCTAGC-ACTTCTCCGGTAGTAAGTCTTTAGAAAAGGAGTTGCATAGAAGATACAGCAATAGGGAAGT-CAAAACCAAAATACTTCTCCATGTCTGAATAGCAAAG ................................................:...........:-......................-..........x:....------.:......xx...-----------.:.:.:.:x...........:.:..:..:...xx..x.........:::x......-------x...:...x:xx:.x...xxx.-:.:...x.x.x:.x:xx.:............:....................x......x.-..x...x.x..x.x.x:.....:..x...x...x... 61M1I22M1D16M6D13M11D56M7D22M1D61M1D37M 229/288 79.5% 289/94230402 0.0% 28/288 9.7% 34995520 NA +34851 chr4 + 190214555 95168448 95168447 95169426 979 AAACACTTCATATTGCATATTACAAACAAACACA---CATGTTGTGAAAAAAATGCTTGTTTG--TGGGGTTGAACATGAATCACTGTCTT----CCCTGCAGTGCTACAGCTTTATTCCCAAAGGGCACCAGAAGGGTCCCTCCAAGGAA---TAGGAGTCTTA-GT-TATTTCTTTTTTACACTTAGATTCTCCACTTCCCTGATACAAACAGT---AACACTGGTTCT----------------------ACAAGT---TCTAG-AAACAGAACACTGATGGGAGGATTATC-TGAGACACTTGATGCACACGATTTGTAGCAAAAGTCTGTGATTTCTCTGTAAATTACTAATCTGAAATAGACACAACAAACCGTCCACAGCTTCAACTTCAAATGATTTGAACAAAAA-TAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCA--ATTTGATGTAAACAACATTTGTAGAAATTGGGTTTGTTAAGAAAGTTTATCCATATATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCACACAGCATACAGCCCAACTAAGAGGAAAATTAGGTTGATAGCTAAATTCAAGGTACAAATTTACACAATTTTTCTTAACTCCCGTGATGATGTCCGAGTAAAGTGGGCATGTACAT--GGGCAG--------TTGTATCTGTTTTCCTTCTGGCTCCTGCTGCAGTCTTGCCTGTGAAGTGCATTGGTCTCATCTGGATTTCCTCCTCAGCTG--TGATTCACCTGGACGGCCACAGACTCCCTGTGCATTTTTGTCCTTCATTTCCCCTTCCAGCATGGTGGTTAATACTGCCCTTCTGCTGCTAAGGACACCACCGTTTCATGTCTTCCCATTTCTTCCAAGACAGCTGCCAGCATGCTCAGGTTTCCATCTGGGAAGTTCTGTGCTTCCCAAAGATCCAGGATTACGCCAGTTGGGCTGGATTTGGTGGCAAAGTAATTCAAGTACCTGTAATTGGGAAAGAGAAAATGTGCT chr4 + 94230402 60174248 60174247 60175266 60174248 60174247 60175266 1019 AACCACTCTGAATTGCATATCCAATCCCACCATATAGCAAGGGGTAGAAGGGGTCCTGTTACGCTTTGAATTGAAAATTGACTCCTACCCTACAGTCCCACTGTCTTACAGCCATTTTCCACCAAGGCTCAGTGGGGCTCCTTTCAGGGAAGGATGGGAATGGTATGTGTGTTCCTGCTTAGCACCCAGAGTACCTGCTTTCTAGATGCATGCCTCTTAAACACTGATTTTTTTGTTTGTTTGTTTTATTTTTACAGGTAGGTCTAGGAAACAGAATAATGACAGGAGGATCATTATGAGACAATCAATGTTCA-GAATTGTAGCCAAAATCTG--AATTCACCAGAAAACAATAATCTGAAATAGCCACAACCAACTGTCCACAGCCTTGTCTAGAATGGCTTTGAACAAAAAATATAAAGAGCCATGGACAGTCTCCTTACCCCTGTCCAGAATTTGATGTAAACAACATCCATAGAAACTGGGATTGTTAAGAAAGTTTATCCATATATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAAATCCTGTACCAAGCAGTGTACAGCCAAGCCAAGAGGAACATTAGGTTGATTTATATTTTCAAGGTACAACTTTGCATGATTTCTTTTAGATCCTGTGATAATGTACAAGGAGAGCACATGTGAAGGTCAGGGCTGTATATTTTTTCTGTTTGTTTGCTTGCTTTCTTCT-CTGAAATGTCTCTTGTGTAACTCATTGG-----TCTGGGTTTTCATTTCAAATGCTTGCAATAACAGGGC-ATTACCG-CTCCCTGCG----TCTGTCCTTCCTGTTCACGCCAAGGCTG--CATCAGTAATTTCCTTCTGCTGCCAAAGAAACAACGGTTTCATGTCGTCCCATTTCTTCCAGCACTGCTGCCAGCATGCTCAGGTTGCCATCAGGGAAATTCTGGGCTTCCCAGAGATCCAGGATCACCCCAGTGGGACTCGACTTCGTAGCAAAATAATTTAGGTACCTGCAA--AGCAAAAAGGAGATTTGTT ..x....:::x.........:xx.xx.x.x..:.---..x.xx..::..::::.x..xx.x:.--.x.::.....x..x:.::x..::.:.----:..::.x..x:......:x.x....xxx.:...x.x:x::..x...:.:..:....---.:...:.xx..-..-.:..:..x:..x:...::...x.x:.::...:.:x...:..x:.xx:---.......:..:.----------------------...:..---.....-........:.x...::.......:..:-.......x.::...:x..-..x.......x...:....--.x...x.::x...x:.x.............x......x...:.........:.::x..xx..xx.x............-..x..x..............x..:x:.:.........--..................:::......:....x...............................................................:...........x:...::.......x.:.:........x...........xxx..xx............x...:..::....:.:...:x...:.....:....x.:..x.:..::x:::..x.x:.--....x.--------..x.:.:.....x.:.x..xx..:..-...x.:.x.:x.:....x.::x......-----.....:...:.x::...:x..--..xxx:.x.x..:.-:::..x.-.......:.----.:........x.x.:.x.x:.x..xx..--x:.:.:..x.x:...........:..:..x..x..x..........x..............:x..x....................x.....x.....:.....x........:...........:..x.....x..:..x..:..x..:.....:.....:.:.......:..--:.x...:..:.:..x..:. 34M3I26M2I26M4I56M3I11M1I2M1I47M3I12M22I6M3I5M1I27M1I18M1D19M2D78M1I37M2I224M2I6M8I26M1D28M5D21M2I14M1D7M1D9M4D28M2D174M2D19M 697/960 72.6% 1019/94230402 0.0% 78/960 8.1% 34994200 NA +12643 chr4 + 190214555 95170143 95170142 95170386 244 ACCATACCCACCTGTCCAGGTTCAGCTTATGGGCCAGCATCCTCCAGTCATGGCCTCTCGTCTGGGGGGCATCCAGGCTGCTACAGAGCTTCTGCCGGATAGGGAGAGGGATGCTGAAAGCACTGGGCCCCGTGACCGTGGTGATGGTGTTCGCAGGATCCAGCAGCGGCAAATCGATGCCAGTAGGTTCCTGTAGTTCAGGGACAGGAACAACAC---------------AGCATTATTTCTGAGGACAAAAGCAATC chr4 + 94230402 60175448 60175447 60175706 60175448 60175447 60175706 259 ACCCTTCTCACCTGTCCAATTTCAGCTTGTGGGCCAGCATCCTCCAGTCATGGCCCCGGGTCTGGGGTGCATCCAGGCTGCTGCAGAGCTTCTGCCTTATTGGGAGGGGGATGCTGAAAGCGTTGGGCCCAACTATCGTTGTGATGCTGCCTGCTGAATCCATGATGGGATAATCAATGCCAGTGGGTTCCTGATGTTGGAAAGAAGGCAAAAGACAAAATAAAATACATTAGTTTTGTTGCTGGGTGCAAAAGCATTC ...x.x.:..........:x........:..........................:.xx........x..............:.............xx..x.....:..............::.......x::x.:...x......x..:::..x.:.....xx.xx..xx....:........:........xx...x:::::x...x.x..x..---------------..:x..:..x...:.x:........x.. 216M15I28M 187/244 76.6% 259/94230402 0.0% 15/244 6.1% 34994695 NA +12209 chr4 + 190214555 95182888 95182887 95183069 182 GCCACTTACCTCTGACACGGTGCAGTTGAGCTGGAAGATCTGCCCTTCTCCTTCCACCTGCCGCACACAGAGTTTGCAAACCAGCTCCACTGTGTTCAGGCTAAATCTTTCCAGAGTGAAGGTGCAGTGCAGGTTTCTTTGAGATCCACTCCAAACATGGTAAAATGGAATTTCCTAAAGGA chr4 + 94230402 60177894 60177893 60178075 60177894 60177893 60178075 182 GCCTCTTACCTCTGATACTGAGCAGTTCAGCTGGAAGATCTGCCCTTCTCCTTCGACTTGCCGCACACAGAGTTTGCAGACGAGCTCCAGGGTATTGAGACTGAATCGTTCCAGCGTGAAGGTGCAGTGCAAGTTCCTCTGGCACCCGCTCCAGATGTGGTAAAAAGGAATCTCCTGCAGGA ...x...........:..x.x......x..........................x..:....................:..x.......xx..:..x..:..:....x......x................:...:..:..:x.:..:.....:.::........x.....:....:x.... 182M 151/182 83.0% 182/94230402 0.0% 0/182 0.0% 35004994 NA +10330 chr4 + 190214555 95185009 95185008 95185203 195 GATGTCTCCAGACCTTTTGTTC-----GGCTTGGGAACCTTACCTGATATTTAGCCAGCAATTTGCTCTTCCAGAGGGAATGGGCGATATCGTGAATTGACAGGCGCAGGTTGTGGGTGCTGCCTTTAAAATGAAGAGCCTTAGGTTCTTCTAGGAGCTGTCCTCCCATCTGTCTCTCAAGATGTAAAATTTCCTATAAT chr4 + 94230402 60178318 60178317 60178517 60178318 60178317 60178517 200 GATTTCTTTAAGCCTCTAGGACCCAATGTTTTGTGATGCTCACCTGGTATTTAGCCAGCAGTTTGCTCTTCCAGAGAGAGTGGGCAATGTCATGAATGGATAAGCGCAGGTTGTGGGTACTTCCCTTAAAATGCAAAGTTTTGGGTTCCTCCAACAGCTGCCCACCCATCTGCCGCTCAAGCTGGAGGACCTCCTGCAGT ...x...::.::...:.x.xx.-----.x:...x..xx..:.....:.............:...............:..:.....:..:..:.....x..:.:...............:..x..:........x.:..::..:.....:..:.:x.....:..x........:.x......x..x.::.::....::.:. 22M5I173M 145/195 74.4% 200/94230402 0.0% 5/195 2.6% 35006691 NA +15887 chr4 + 190214555 95187084 95187083 95187395 312 AAGGCATAATGAGCTTATGTTGATCATGTTTGGTGTCTAGTTAGCATAATAGAGAAAGCTGATGTTCCCAGTGAACCTGGCACCTGACAAATTCTAAAGCTAAAATGATGTTTGTTTATAAGCCATTAGAAGAAAAGAAACATAATTAG-AAATCTTTGAGATTACAGTCATGCCAATCAATCAGTTCCAGCTTCTTTCTTTCCATATGCCCTAATTACCTCATCAAGACGTCTAAAGAGCAATCGATAGTAATTATCTGATTACTATAGATCTTCATTATGTCGAAATTATCTCCCTGGGATGTCTAAAAGA chr4 + 94230402 60179470 60179469 60179764 60179470 60179469 60179764 295 AGGGTGAAACCAGCCACTCTTGATCAAGTTCAGCACCTAGTTAGCACAAAAGA-AAAGCTCATGTCTCCTGTGAGCCCAGCACCTGAGAGATCCCAAAGCAAAAATG---TTTGCTTATCAGCCATTACAGGAAAAGAAAAAGAATCAGGAAACCTTTTAGATTAAGGTTATTCCAGTGAGTCAGTTCCAGTGCC--------------CCCTAATTACCTCGTCAAGATGTCTAAAGAGCAATCGATAGTAATTATCTGATTACTATAGATCTTCATTATGTCCAAATTACCTCTCTAGAACAACCAGAAGA .:..::x..:x...:xx.x.......x...::.:::..........:..x...-......x....::..x....:..::........x.:..:.:.....x......---....:....x........x.:.........x.x...:..-...:....x......x:..:..x...:.x.:..........:x:.--------------.............:......:......................................................x......:...:..:.:.::x.:.:.... 53M1D53M3D39M1I45M14D104M 233/294 79.3% 295/94230402 0.0% 19/294 6.5% 35007614 NA +18360 chr4 + 190214555 95202702 95202701 95202990 289 AGAGGGCAGGCTAG---GTGGGAGGCACTTACCTTCAGGGCATCCTGGGTGTCATCCAGACAGTAGACTCGGATGCTGTACTCCAGCGAGGAGCAGCACAGGGGCCCAAAGATGGCCAGCTTGAGGCGCTTCGCAGCCGCTTTGGTGGTGGAATGTCCTACCAGGGCGTAGGTGCTGAGGTTCTCTGTGAGGATGTGGCAGGCCTCTGCATCCAGCTGAATGTAGCAGGGGGTGGTGAAGTTTTCCTCCCCGACCACCACCACATCCTGGGGGACAAGAGGGAAGGGCCATG chr4 + 94230402 60182435 60182434 60182721 60182435 60182434 60182721 287 AGAGGAAAAGCAAGCACGAGAGCAACAACCACCTTCAGGGCATCCTGTGTGTCATCAAGGCAGTAGACGCGGATGCTGTACTCCAGTGAGGAACAGGACAGCGGTCCAAAGATGGCCAATTTGAGACGTTTGGCTGCTGCTTTGGTGATGGATTGTCCCACCAAGGCATACGTGCTGAGGGTCTCCGTCAGGATATGGCAGGCCTCTGGGTCCAGCTGGATGTAGCATGGAGTGGTGAAGTTTTCCTCCCCGACCACCACTACATCCTAAGGGAGAA-----AGAGGCCATG .....:x.:..x..---.x.:.x::..x::.................x........x..:........x.................:.....:...x....x..:.............::.....:..:..x..x..:.........:....x.....:....:...:..x.........x....:..x.....:.............x:........:........x..:.............................:.......::....x..-----.::....... 14M3I260M5D10M 235/284 82.7% 287/94230402 0.0% 8/284 2.8% 35020267 NA +9922 chr4 + 190214555 95206594 95206593 95206798 205 CTTGCATAGCATCTTTATCCC----GACAGCAG-CTCACCTCCCACTGTCCCTGTGCTGCCTGGTTCTTGAGCAGTATTTTCCAGTCCTCGGTATTGGGGTCTGCGCAGTGATGCATAGTGAGGACGACTGGGCGGGTGAGCAGAGCTCCTGGGGGCCCACAGCTCACCACAGGGGTCAAAAGTGTCTGAGAGTCATCCATGGGTGGCCT chr4 + 94230402 60184296 60184295 60184505 60184296 60184295 60184505 210 CTTGCACAGCAGGTGGAGGCCAGAGGCCTGCAGACTCACCTCCCATGGTCCCTGGGCTGCCTGGTGCTTGAGCTGGATCTGCCAGTCATCCATGTTGGGCTCAGCACAGTGGTGCATGGTCAGCACAACGGGTCGGGTCAGCAGCGCTCCTGGTGGGCCACAGCTCACCACTGGTGTCAGCAGCGTCTGGCTGTCTTCTACAGGTGGTCT ......:....xx.xx.xx..----.x.x....-...........:x.......x..........x.......x.x..:.x......x..x:.:.....x..x..:.....:.....:..x..x..:..x..x.....x.....x........x..x..............x..x....:x..:.....:xx...x..:.::.....:.. 21M4I8M1I176M 157/205 76.6% 210/94230402 0.0% 5/205 2.4% 35022298 NA +8773 chr4 + 190214555 95216094 95216093 95216556 463 AAGTCAGTGCACCAGAAAAAGCATATTTACCTCATAGTTTCTTTCCTGTGTACAGTCACATACATTTCGTAGACTCTCCCTTGGGGAATGGCCCCAGCGGGAATCAGCAAGCTGACTCCTGAATAGCAAAAGAG------------------------------------------AAAAGCAGTCATTTAAGACTTTTGCAGCACGTAAAAGGGAATGAGGAGATTTTGTGACCGCGCAGCCATAAGCCTGCTTCATTTTCTCT----------AAAGACATGTAAATA-----------TTCCGAGTTGCTCCATTTTCCTTCCTCATTGGCCTCCTTACCACGGCTCCCTCTGAACTCTTATGCAATTACTTAAAGGAATGATGTAACTTTTTAAACTCTTGTTTTATTTGAGGAACAGACAGATGGTTCCACTGTTGTTTTCCTTGCAAGACAAGGGGAAAACCAACAA--CTGCTCAAAATTTCAAACAGCTGTAATGATGCATCATTTCC------ATTTTTTTTTAA chr4 + 94230402 60193153 60193152 60193664 60193153 60193152 60193664 512 AAATAAATGTACAAAGCAAGTAAATTTTACCTCATGCCCTCCTTCCTGTGGACTGTCACATACATTTCATAGACTCTTCCTTGGGGAACAGCCCCTGCTGGGATCAGCAAGCTCACTCCTGCAGAACAGAAGAGACaaaaaagataaaatggagaaaaaaaaaatacagaaaaaaaaaaaaaaGCCAGGTGAACCTTT--------GAAGAAGAGCAACAGGAGAATCAGTAG--GTACATTAGCAA---TGCTAGATTTTCACCCAGCCTTACAAGAGGGCTCTAAATGAGGTTAGCAACTGTGGAGATAAAGCA-TTTACTGCAGCCCTGGC------ACCTCTTGTGCCTCGGCACTGAAATGCTGCAGCAGAGAAGAG-GATTTTCTTCCCTTCCCTTTTATTTTATTTAAAGAGCAAACAGATGGTTACACTGCTTCTTACCTTGTAAAATAA-TGGAAAGGGAACAACTCTGAGTAAATTTTCCAACAGCTGTAACAGGACATATCTCCCTAGGCAATTCCTATTTAA ..:.x.:..:..x.::x..:xx.xx..........:x::..:........x..x..............:........:..........::.....x..x..:...........x.......x.x.:..:.....------------------------------------------....:x..:..xx.:.:x....--------.x.:...:.x.xx......x.:x..::--.::..x:x::..---....xx......x.:----------.:..:xx.x.....:-----------.x:x...x.:xxx..-...x..x.xx.x:....------...x.xxx.x....x.x...xxx....x::x:.xx.:.:..:-...x.xx:.:::.xxx..:..:........:.:..:..:..........x.....:.x:..x.....:..:.:..-x.....:xx.....--...xx:...x....x...........:::x:...xx:.:..------...::.x..... 134M42I22M8D27M2D12M3D15M10I15M11I15M1D17M6D42M1D75M1D14M2I41M6I12M 294/441 66.7% 512/94230402 0.0% 93/441 21.1% 35022941 NA +25613 chr4 + 190214555 95218547 95218546 95219343 797 TCAAAAAATTTGTTTTCTGTATTATTGCTTCA-------------TGTAGTAAATTGGAACTTAATCAAATGATATATTTAATAATTAATTCGTCCTTTTAAAGTATAATGACAACATT-AGGACTTGTGGCTTGATGTTGCCT-TCTGAAGTTCTA-GTAAAAAGGAGGTCAATGATGGTTCTAAATTACACCTCA---GCAGAAAGTTGTGAGTATAGAATTTCT--------AGAGGAAGTGTTTTCAGAATTAGTTGGAGGAAGAGAAATGGTTTTGCTGATTTGTCTGAAGTAATGTTCTGTTTACATTGAAAGTAGATTTGGGCTGGATAGGTCACATTTAACATTTCAGGCCTAATGAAAA-CA---TCCCACGAACAAAAAAGATTTT----GGTATGGAAAAATATGTTTCAAGCTGCCTCTTTGCAATTTAAACCT-----------CTAGGAATTACCTGAATTGGGAACAATAAGGTGACCTCCCAGCGAGTTGAAGCTGCCAAATGCGGTACAGGATGGATCAGTCTGCCTTGCTAGACTCTGGTTCTTCAGGCTGAGGGCTTCATTCTCCAACAACGACTGGGTCATCTGAGGGGACAGCTTGGACGTAAACTCAGAGAGGTCATCTTGGGGGGTGACAGCACCTGAGGTGTTGTACACTTTGATTTTCAGGTTGGGCAGTGGATCCAGAATTGGAGAGTTGGTCATTGGGATTTTGTCTGAGACGTCATGCAGGGCATAGACAGGTCCTCTGTACATGGCTGCAGCTGACGTGAGGTCTGGGGGTACAGCCAGCAGATCTGAGTCAGAA---AGAGAAAATAATCCCATTG chr4 + 94230402 60195242 60195241 60196057 60195242 60195241 60196057 816 TCCAAAAATTAGCATTCTGCTGTCCTACTGCAGTACTGCACAGTCTGCAAAGAATTGGAAGTGGAACAACCaatttattttttaattaaattGTTTTCTTTATTTGTGATGTTGAGGTTGAAGCTTTCTGGCTTTTAGTCCCTTATCTAGAGCTGAACGAAGGAAAAAGGTCAAGGATG---CTGAACCACGTTTCACATGGAGAAACTCTGATGTATAACATACCTCAGAAAGGAGTGAGAGCCCTGTGACATTCTGTTAAAAAGGCAGCCAGGACTTTGGGAAAGTGAACCTTGAAATATTTTATTTAAGCTGA-------------TTGAGTAAAACACATCTGTTTGTTCTGACCAAAGAAAAAGCAAACTCCCTGGAGTGACCTTGTTTTTCTCTGGCATAGAAGAA---------AGCTAACTCT-----ACTTAAACCCTTGAAATATGGCTAGCACTTACCTGAATTAGGAATTACTAGGTGGCCCCCTAACGAGTTGAAGGTCCCAAATGCAGTGCAGGATGGGTCTGTTTGCCGTGCAAGGCTTTGGTTCTTCACGTTCAGAGTCTCATTCTCCAACAGAGACTGGGTAATCTGTGGGGACAGCTTGGAGGAGAAGTCAGAGAGTTCATCCTGGGGGGTGACTGCTCCAGAGGTGTTATAAACTTTAATCTTCAGATTGGGCAGTGGGTCCAGGATCGGAGAATTGGTCATTGGGATTTTATCAGAGACATCATGCAAGGCATACACAGGACCCCTGTACATGGCTGCAGCAGAAGTGAGGTCTGGTGGCACTGCCAAGAGGTCTGCATTGCAAATGAGAAAGAAGAACCATATTG ..x.......x.:x.....:xx.x:.:..x..-------------..:.:x:........x.x:.x...x::..x.....xx.......x.:..::.:..x.xx.:.:...x::.x:..-.:.x:..x......xxx..:x.:.-...::..:.xx.-.x.::..::.......x....---..:..::..:::...---.x.....x.:xx:x.....:x..x:..--------..x.::..:x:.x.x.x.x.:x...::.::::x..xx.x.::....xx:.xx..xx:xxx.x...:..:.:....x::...-------------:..::..::x.....:.:x:xx...x.:..x..x:....-..---....xx..:::.xxxx.x....----..:..:...:..---------....:x....-----.:.......:-----------....x.x...........:....:x.:x.....:..:..:.:..........x.x........:..:........:..x..:....x...x..:..:..........x.:.x..:.::.............:x........x.....x..............x.x:..x........x.....:...........x..x..x........:..x.....:..:.....:...........:.....:..:.....:.................:..x.....:.......:......x.....x..:.................x..x...........x..:..x....:x..:....x:.::x..---...:.:..x..:.x:.... 32M13I74M1I24M1I12M1I21M3D15M3I27M8I81M13D39M1I2M3I22M4I12M9D10M5D10M11I367M3I19M 537/767 70.0% 816/94230402 0.0% 79/767 10.3% 35023305 NA +22995 chr4 + 190214555 95219964 95219963 95220458 495 TGAAGTGGAATGTCAACTGACCTTGTCTTGCTGCCTTGATGTTCACAGGCTGAAAGCCCCCATTGAGTGCCGAAGAGTCAATAATATCTGACTCAAAGTCACGATGATTCTTCCGATACACAAACAAGGCCACAACTACAGAGATCGCCAGGCAAACGATCACTGCTATCACAATCCCAACATAGAGAGCAACATCATCTGAATCAGGAGCAGCTAGA-GAGGAGAGTGA--AACATTGAACCA----GCTGCTTATAGAAATTTCCCACAGTACACATATGTATTGCTATAATTTTTT-CAGACATTTACTGCCTTTTTTATAGGTTAATTTCAAATCTATTTCAAAAGCTATATAAAATGGCTGTGGCCTTTCAGTGGAAAATTGTCTCTGATTTCTTTTC------CTTTCTCACTCTGCATCTATCCACCCACTAATCTATCTTATAATTGGGCAG-------CATAACAGACTGTTTATTAC-----TAGGCATATAAAGAAA-------CTG-GAACTAAAAC chr4 + 94230402 60197214 60197213 60197740 60197214 60197213 60197740 527 TGGAGTGAAGTGACAACTAACCTTGTCTTGCAGCCTTGATGTTAACAGGCTGAAATCCCCCATTTAGCGCCGATGAGTCGATAATATCTGACTCAAAGTCACGGTGGTTCTTGCGATAGACAAACAGGGCCACAACCACAGAAATAGCCAGGCAAACGATCACAGCAATGACAATCCCCACGTAGAGAGCAACATCATCCGAGTCAGGTGCAGCTAGAGGAAGAGAGGCAAGAACCTTGAAGAAATGTGCTCCTCATGGGGTCTTTTGAGAAAATACATTCTTACTATTCCCATTTCCTGCAGATATTTACTACC-TTTTTATAGGTTAATTTAAAATCCA-TTCTAAAGCTATATAACAGGTCTATGCCCTTTTTATGGGAAATGATCTCTGTTTTCTCTTTAACTCATGTTCTGTTTCTTTACCTATCTACTCGTTCATCTATCTAGCACCCAGGCAGTGAAGCACTAAACAGAACACTCATTACGCAGTTAGTCTTATGAAGCAAATTCACCCTGTGAACTAAAAC ..:....:.:..x.....:............x...........x...........x........x..:.....x.....:.......................:..:.....x.....x.......:.........:.....:..x.................x..x..x........x..:.................:..:.....x.........-..:.....xx.--...x.....xx.----...x..:..:.::x:..::x.x.:x.:....x:x..:.::.x:x....::.-....:.......:..-.................x.....:.-...x............x.x.x..:..x.....:x:...:....x:......x.....:..:------:x....xx:...x:.:.....:..:.::.x........x::.x:::.....-------.xx......x:::.:.....-----...x.x...:...x..-------...-.......... 218M1I11M2I12M4I51M1I15M1D25M1D61M6I51M7I20M5I16M7I3M1I10M 384/493 77.9% 527/94230402 0.0% 36/493 7.3% 35022750 NA +46362 chr4 + 190214555 95222142 95222141 95222998 857 AAACTTGAACTAGGGGCAATAACGTTAAATGATTATTCAGCAACATAAAATCCAAACATCAAACTTACAAGAAAATCCATATTCATTCTGGGTTCTCTGTTCAGTTGAAATGGGATAAATGAAACCTTGAAAAGAAAAAAAAATGAAACAAAAATGGGAACAAAATCAAATTAATGAGG-GAAAGAAAATAGGAAGCATGAAAAATGGTTTAATTAAAA-------------------GGAAAAGAAACCTGTGGTCTTTTAAAATTCTGATTCAGTATAAAATTATGATTTTGCATCTCCTGTCTGCTCTGGAGCCTCACTAAGAATTAATAAGCAGGCAGATTGAATTTTAGAGCAAAAACTGGTCTCGAGTCACTAACTTTGGAGTGCTTAAAGTCTTTCTTTTATTGAGCATAAACTCTAATGGATCTAATTTATTTCAGACATCAGGGGTCATTAGCATAAGGAAAATCTTTTTTCCTTATCCCTGCCATATGCTTTAATTCCCAGGACATATTCAGTAAGGCTCTAAACAGTTTTTTTTTCTTTTTTATTTAATCATAACAGCTTGTGCTTGGTCTAAGAGAACTAAAGAAGACCTGTCATCATTGGTCAAAGGTTAAGTACCCATTTACTGAGCTAAGCTGAGACCACCTCTCCCCCGCTCCATCT--CAAATCTACTTTTTGGATTTTCTGTTGTTTCTTGCCCCCTTCATTTAATAGGAGTTCGATAGGTTTTGCCTAGGGACTGAACAGTTTGTCAATGCAATGGAAACTGGATGCTTTTTATTTGAAATCATTAGAAAATCAATAGGGCCTA-GAGGTTATAAGGGTATTTATTTTAGGGCTTCAGAGAAATGGTGTATATTGGGAAAA chr4 + 94230402 60198793 60198792 60199635 60198793 60198792 60199635 843 AAGCTTGACCCCAGG--AACAGCACTGCATTAGTGTCCAGGAACGTAAAATG-AAACATTAAACTTACAAGAAAATCCATATTCATTCTGGGTTCTCTGTTCAGTTGAAATAGGATAAATGAAACCTTAAAAAGAAAGAAA--TTAAACAAAAATGGGAACAAAATCAAATTAATGAGGAGAACAAAAAAAGGAAGCATGAAAAATGGTTTAATTaaaaaaaaaaaaaaaaaaaaaaaggaaaagaaaTTGATGGCACTTTAGAATTCCGATACAGCACAGAATTATGATTTTGCATCCTCTGTCTCCTCCAGAGCCTTACTAAGAATTACTAAGTAGGCAGATTGAATTTCTAAGCCAAAATCGGTCTCGAGTCACTAACTTTGGAGTGCTTAAAGTCTTTCTTTTATAGAGCATAAACTCTAATGGATCTAATTTATTTCAGACATCAAGGGTCATTAGCATATGGAAAGTCTTTTTTCCCTATCCCTGCCATATGCTTTAATTCCCAGGACATGTTCGGTGAGGCTCTAAACAGT---------TTTTTTATTTAATTATAGTAGCTTGCTGTTGATCTAATAGAGCTAAAGGAGACCTGTCGTCACCGGTCAGAGGTTAAATACCCATTTGCTGAGCGGAG---------------------TCCATGCAGAAAGACCTCTTTCTGGATTTCCATGGAATTATTTTATCCTGTCTTTAAGACGTGTTCAATAGGAATTCCTCAGGGAGAAAAGAATTTGTCAGCAAACAGGAAACTGAGTAGCTTCTCTTCAAAATTATTAAAAAATCAATAAGGCCCCTGGGGTCATAGCATTATTTATTTGAAATCTTT--GCAAGCCCTGTATATCGACAAAA ..:.....x.:x:..--..:.:.::.:x..x.x.:.:...x...:......x-......:...................................................:................:........:...--.x..................................-...x:....x.............................-------------------..........::x:...:x:....:.....:...x...:.:.:.................::......x...::......:...........x....:...............:x:...x....::.............................................x........................................:..............x.....:..........:.................................:...:..:..............---------.............:...::......:xx...:.....x...:......:.........:...::.....:.......:.........:......x:..---------------------.....x:--x..:x.:x....:.......:.xxxx:x..x..x:x:...x:x.....x.x.x....:.....xx..x.::.....xx:..x.:.......:::x.xx........::.:x:..:.x..::....:....:..........:....:x-.:...:...:x:x.........x.::x...:--:x..::xx.......:.:x.... 15M2D35M1D88M2D36M1I39M19I300M9D98M21D7M2I148M1I31M2D23M 664/820 81.0% 843/94230402 0.0% 60/820 7.3% 35023349 NA +13279 chr4 + 190214555 95242423 95242422 95242667 245 ACTTACTCTGCATGCAAAGCCCATCAGTGCAGTTCTTGGATTGCAAGACGAGGCCGTCGCAGTCCTTGCCTCCATTCTTGGGGGCTGGCGCCGTGCACTCCCTCCTGCGCCAGTGGGTGCACTCAGTTCCACAAGTAGACCACTTGCTCCATGGCGTCCACCTGCCATCCACTGCCATGGAAAAAATGCAGCAGGAGGTCAGAGGGAGAGGCAGCTGCTTAAGGG-----ATGGAGCAGAGCTCAAATAT chr4 + 94230402 60211579 60211578 60211823 60211579 60211578 60211823 245 ACTCACCCTGCATGCAGAGCCCATCAGTGCAGTTCTTAGACTGCAGCACCAGTCCCTCGCAGTCCTTGCCTCCATTCTTCGGGGCCGGAGCTGTGCACTCCCTCCGGCGCCAGTGGGTACACTCTGTGCCACAAGTGGACCACTTGCTCCAGGACGTCCATTTGCCATCCACTGAGACAAGGAGAAGACA-CAAGGTGTTAGGAGAA----CAGATACACAAAGGGGTGTGTGGGGCCAAGCCAAAGCAT ...:..:.........:....................:..:....:x..x..x..x.......................x.....:..x..:.............x............:.....x..x........:..............x.:......::............xx.:::::.:..x:..-..:.:x..:..::.:.----...x.:.x:..:..-----:...:..x:...:x..::.. 190M1D16M4D14M5I20M 187/240 77.9% 245/94230402 0.0% 10/240 4.2% 35030844 NA +12704 chr4 + 190214555 95244493 95244492 95245165 673 AAACTTTGCATTCCTTATA-ATTCATTTCAAATGTTGTATTTGCCCTT-CACCAGAAACTGACACCAAATATAAAAT-ATTTCCATCTAAAACATTTTCTAAATTTCAGTTCCAATTAATTTCTACGGTTTTCTGAAGATCAAGGATTGTTATTCCTAAAATGTGTGGCTTCCAGTGCCATTCAAATCCTTTGAATTATAAAATCTGCAATCTTGGCCCCAGCAGTTTTGTTGAATAATATAAAGGGATTATATCCAGTAGTGTTTAATCTCCTGTTTTGTACAATTTTGCATGTTTTGGTAACAAAGTTAAGTATTCTTTTGGAGGAAAATACTTGATTTCCCAGCAATGTAAACAGTGAGTAGGATGGATTTA--AATAACGTTCATCACACATTCAGATCAAGAATAAAGTCTGTGTATCTATTCTCT---AAAAGCATGTTTCTTGAATAATAGGAGATACTTGGAATGAGAGGACTGGTTTATTTACCTGGGCATAACGTAGTACAGGCTATTTTCTGCACACTCTGCCCTTCACAGAAGGCACCCCCATTGAGTGGTGCCGGGTTGGTACAAGTCCTTGTACGTTTCTGATACCCTCGTCCACAGCGGCTGTTACACACAGACCACTCCGTCCAGGTGGACCAGCCACCGTTGACTGAA----AGGAGGCAAACAGTAA chr4 + 94230402 60212601 60212600 60213216 60212601 60212600 60213216 616 AAATTTGGCATCCATTCTCCACATGCCTCAAATGATGCACTTGCTGTGACAGCTGGACTGAACAGACATTACAAATTTATTTGCATCACAGTCACTTTGTGGACTCAAATTCCTGTCCTCTTCCAGAGCTTTC---------AGCCTTTATCTTCC-ACTGTCTGAAGCTCTGAGCGTTCTCCAAATCCCCTGAATTACCAAGGCTGAGA-CAAGGTCGCA--AGCTGTGTGCAGAAGT-----GGGACCAAATCCCCTGCTGCTTGATGTAATGTGT-GCACTATTTTATCTACTTACATAACGCAATTTCCTATTCATTCACTG--AAATGTTGGATTT---------ATTAATAAAGAGAAGGAAGCTTCTGTGACTAGCAGCCTTCTCATG----------GAATAA-----------CTGGTGCCAGAAAAAAGCATGCCT---------TGAGGGCTACATGG--TGTTCATACTG-------TACCTGGACACAGGGTGGTGCAAGCTATTTTCTGAACATTTTGCCCCTCGCAGAAGGCCCCCCCATTGAGTGGGGCAGGGTTAGTGCAGGTCCTTGTGCGCTTCTGGAAGCCTCTCCCACAGCGGCTGTTGCACACTGACCACTCAGTCCAGGTAGACCAGCCTCCATTCACTGGAAAGCAAGAGGAAGACTGTAA ...:..x....:.x..x.x-.:x::::.......x..:.:....:x.x-..x.x.:.x:x:...xxx.x..:...x.-....x....xx.:x..:...x.::.:.:x.:....x:.:xx:...:.x:.:....---------..xx..xx.x....-.xx:.x..x:...::x..:.::x.:.......::.......:x..:x...x:.-.xx..:.x..--..:.x...xx.:x.:.-----....::.x....xx.:x..:..:..x.xx...x.-.:..x.....::x.::..xx:....:x.:..xxx.....x..::xx.--....::.x.....---------:.x..:.:x...x....x.xx.:.:--.x..:.:x:.x..x..::----------......-----------..:x.x:.x---.........::.---------.::.:.x...x...--..xxx:x....-------.......:..:.:x..:..:..:...........x...:.:.....:..:........x..............x..x.....:..:..:........:..:.....:x.x....x:..............:.....x........x........:........x..:..x....:.----.:....x.:..x.... 19M1I28M1I28M1I55M9D14M1D53M1D10M2D16M5D34M1D47M2D13M9D25M2I18M10D6M11D9M3I12M9D14M2D11M7D176M4I16M 401/604 66.4% 616/94230402 0.0% 81/604 13.4% 35031892 NA +13015 chr4 + 190214555 95250480 95250479 95250710 231 CACTCACCATAGACTATGACAGTGGCAGTTGTACTTTTCCTCTTGGCAACAATGTTTTTGGCAACACAGGTGTAATTTGCAGTATCAGAGAGTCGGGCCTGCTTTATGATGAGGTTGTGATCAATAGTAATATAAAAATTCCGATCTTCAACGGGATCAATTATGTCTTCATTTTTCAACCATTCCACCTAAAGA---TAAATGAGAAAAGTAGATAAATC--CTCAGCATGGATC chr4 + 94230402 60214693 60214692 60214928 60214693 60214692 60214928 236 CACTTACCATAGACAATCACAGTTGCTGTCGTGCTTTTCCTTTTGGCCACAATGTTTTTGGCAACACAGGTGTAGTTAGCCGTGTCAGAAAGCCGGGCTTGCTTGATGATCAGGTTGTGATCAATGGTGATGTAAAAATTTCGGTCTTCCACAGGATCGATCACCTCTTCATTCTTCAGCCACTCTACCTGAGGGATTCAAAGGGCAGGAGGGGAAAAACTGAATCAGCACTGGTC ....:.........x..x.....x..x..:..:........:.....x..........................:..x..x..:.....:..:.....:.....x.....x..............:..:..:........:..:.....x..:.....:..:.:x........:....:...:..:....:.:.:---:...x.:x.::..x:..x...::--x......:x.:.. 195M3I23M2I13M 180/231 77.9% 236/94230402 0.0% 5/231 2.2% 35035787 NA +9976 chr4 + 190214555 95260293 95260292 95260480 188 TACGATGCATTGTTATCATTAACCAGTCTTTTACCATTAAACTTAAACAGCCAATTGAAACAAACAGTTCTGAGCCCATTCTCCCACCACTGATTAAGACTGGGGTGGCAGGTATTAGGGATGACATTCATTTAGCCTTCTGAGCTTTCTGGGCAGACTTGGTGACCTTGCCACCTCCAGCAGCCTTC chr4 + 94230402 58128903 58128902 58129081 58128903 58128902 58129081 179 TAAAATGTATTGTAATCATTAACTAGTATTTTACTATTAAACTTTAATGGCCAATTGGGACAAACAGTTCTGAGATCTCCCTTCCACCACTGATTACAACTGAGGTGGCAGCTGATGTACAGAACTTTCATTTAGCCTTCTGA---------GCAGACACCGTGACCTTGCCAGTTCCACCAGTCTTC ..x:...:.....x.........:...x......:.........x..::........::...............x:.x::..:.............x:....:........x.:x.:x:x.x:..x.................---------......x:x............x:....x...:.... 143M9D36M 141/179 78.8% 179/94230402 0.0% 9/179 5.0% 37131390 NA +11909 chr4 + 190214555 95268535 95268534 95269048 514 CCCTATGATTGGTTAAGGAATTGTCTAATCATATATGTCAATAATAGAGAGCAAAACATCTTGCAGTTTTCTT------ATTATACTCTCCTGTGAAAGACAGATGTGTTGTGTCTAATTATTCACTGATTGGTATCGGGAGAAACGTTAACATAATTGGCACATTTGTTCTAATTAACAGAGGGAAACTGCCACATGCCACCCAACATGAAAAGTGAGTCCA-----GCAAGCATTAGCTAGAAAACTCCACGTCTATCAGAAAGGT--TACTCTGTTAAACTCATACTGAGGCCCATCAAGTCAGAGCACAGGTTGAAAATGATATAGCAGAGTTGAGAACTGTGTGCACACCTAAAAGAATGGAGATTTAGCCTAGAATCCT------------TGTCTATAG-GTACATTAATCAAACAAATG------------GGAAAAGCAATTATGG-GGCTATTATCAAATGTACACTCAGCCAAGCCAAGCTTCTCCAAGGAGCATTAGCTAGTAGCTGGGAATCT--GCCAAGTTTTAC-----TGACTGGTTTGGAAG chr4 + 94230402 60218517 60218516 60219038 60218517 60218516 60219038 522 CCCCATGAGCAGCCGAGGA--CGCAGAACCCAATGTGGCTGTAATTCAGAGCAGCGTACCTTGTAGTGTCTGTGCTGCCATCCTGCTCCCTGGTGAGAGACAGATGTGTTGACTCTAATTATTCACTGATTGGTATCGGGAGATACATTAACATAATTGGCACATTTGTTCTAATTAACAGAGGGAACCTGCCACATGCCACTCGACATAAGAAGTGAGACCATTGGTGAAAGCA--------GGAAGCCTGTAGCCACCGGGATAGTGGTACCTGG--------GGGCTAAGGGCAACCCTGTCCCGCTGCAGCCTGAA------ATAACACAGTTTAG--------GCAGATCCAACAGCATGCAAAGCCTGGCCAGGCTCCTGTGCAGGCTAAATGAGCACAGAGGATGTAAATCACACAAGTGATTACATATGCTGGATAACCTATTATGGAAGCTAATTGCTGACACAAATTTAGCCATGCCAAGTTACT------AACATTATCAGATACTTAAATCTCTTGGCACACTTTTGTATATGCGACTGTTTTAGAAG ...:....x::.:::....--:.:xx..:.xx..:..x.x:....xx......:x::.:....:...x.::x.------..:x.:...:.:x....:..............xx..............................x..:........................................x..............:.:....:.:.......x...-----.x.....--------::..x:.::::x.:.:.:.:.x:..--...::x.--------:x:..:...x.x.:.xx...xx:x::...x:....------...:..x....x..--------...x.:.:..x..x...x.:.x::x.x.:..:x....------------..xx:.:..-.x.::.x.....x....:..------------...x..x.x.......-:....x.xx.x:.:::.x.:.:.....x......:.x..------.:.....x.x::..x:.:::xx...--..xx.x....::-----:.....x...:.... 19M2D52M6I144M5I7M8D25M2I7M8D35M6D14M8D37M12I9M1I20M12I16M1I39M6D25M2I12M5I15M 327/476 68.7% 522/94230402 0.0% 84/476 17.6% 35050018 NA +7480 chr4 + 190214555 95270369 95270368 95270582 214 TTAAAAAAAATGTTGGTCTTTAAGCAAGCTGAAATTATATCTTTAGACAATGGTAAAAAATATAGCCAAAGGATAAAAATACCAAGTGGAAACT--AGTGGCATTTTGCTCAGTTGTTGTT-ACTTCTGTAAAGGAAAGGCATTTGCCAAGAAAGGGAATTTGTTTTCCTGCTGGGGAAACACTCTCTTAATTGCACATATGTCTAGCTTATTGCTT chr4 + 94230402 60219705 60219704 60219902 60219705 60219704 60219902 198 TTAAAAAAAAATTCATTCC--AAAGAGGCTGAGATTACAGCCATGAGAGACTGCAGAACACATATTGA---GAATGAGACAGCAAATGCAAACTGCAGTGACATTTTGTTCAGTTGTTTTTTGCTTCTGC--------------TGCCAATAAGGGGAATTTGTGTTCCTGCTGTGGAAACGCTTCCTTAATTGCACATATATCTAGCTTGCTGTTT ..........xx.::x..:--..:x.:.....:....:.x.:x.:::x:.:x.:.:..x.:...x:x.---..xx:.:.:.x...:..x.....--....:.......:.........x..-:......:--------------......x..:..........x.........x......:..::...............:........::..:.. 19M2D47M3D23M2I25M1I8M14D73M 143/195 73.3% 198/94230402 0.0% 22/195 11.3% 35050664 NA +18796 chr4 + 190214555 95272754 95272753 95273504 751 TACTGGGCACTGAAAGCAA------CATCTCCCTCCAAACCAGTATT--------CAGATT-CTTCTTTCCTCTCT----AAACTC---TTTTGCCTGAAAAGAGTGTAAAGCACCACTCTGGAGACAATATAGCTGCATGGAAATTCATCAATATGAAGTTCCTATTATGGAAGAATGGCAAGGAAACGTGA--AGGACTCATGAAACAAAGTGTTCAGCAGCCATATGAATAATCAATTAGATGGAG-AGCCACCTGATGCTGCACATTTGGCGGAGCCTCCAGCTGCCACCAGTTTTCTGCCCTGTCAGTATCAGCTTAAAAAAATCTGTTCCCTGTTTATCACGACTATACTCAGTAAAATAATCTATTCT-----TTT--------GCACCTCACCCCATATTTTCCTACTTGCTAATTA-GAGATGCAAATGTTGATAAATAAGATGACAGTTTCTAAGCACAACTGGGTCAATAAGTTGAACATTGTGCCCTGTTCCTCCAATTAAACTCCTATGAGAAATAGCTCAATTATAATTAGAGAAGCAATTATCCCCTTGTTAAAGGTGAAAGAAATCACAGGTTTTAGAGAAAAATTCAGCTTTGCTCCTTCTGCCATGCCAACAAATCTTGTATC-CATTGATGTTTTGATCCTAGTACTCTCCAAAAGAGATAATCTGATAAAGC---ATCTCGGAATATATTTC-TGGCTCTCCATGTGACAGTAACATTTTCTAGGCATAAA-ATAAAATGAGCAAAGAGGATTAATTTCATAGAGTGCTGCTATTA chr4 + 94230402 60221466 60221465 60222234 60221466 60221465 60222234 769 TGCAAGGCACTGCAAACGATAGTGCCATTTCCCAGCTGATCAGTATTTGTGCCTACAAACTGCTTCTCTCCCTTCTCTTAAAGCTCACTTTCTGTCTGG---GAATATAAAGTACTA-TCTCCATAATGTTCACCTCCATGAAAATGCATACACATGAACTCCAAATTAAGGGATAACTGCAGCAAAGCATGAGCAGTTCTTATGAAACAAAACAAACAGCAGTTGTATTAATAATCAATTAGATAGAGCAGCTACCTGATGCTGCCTACTTGGAGAAATCCCTAGCTTCCAGC-TCCTTCTGCCCATGCAACAGGAGTGGAATGAATTATGTGCCACAGTCATCTTGATT-----TGGTAAAAGACCTTGTTCTGACTTTTTACAGTGGGGCATTTTGCCCC---TTGCCCTAATTCCTAATTATGACATG------------AATACCACACCATGTTTTAAACTCAGCTGAGTCACTAAACTGTACACTGCACCCTGGTC-TCCAGTTAAACTCCTCTGTGAAACACTTCAATTATAATTAAAGAAGCAATTATCCCCCTGTTGAAGGTGCAGCAAATCACACATTTCTATGCAAAAGTTCATCTAGCAGCTTATGGCATATTAACCAATCTTACATCTCATTGACGCTTTGATCTATATCCTATTTCAGTGACCTAATTTGATGTGACTCTGTCTCGGACTATATTTTATCATGTGCAATATGATGCTGGCATTTTTCAGAAGAAAGTATTAAATGA-CCTAGGGAATTAATTGCTAATAGGTCTGTCATTA .:.x:.......x..:.:.------...:....xx.x:.:.......--------..:.:.-.....:...::...----..:...---..:..:...:---..:.:.....:..:.-...xx.x.xx:.x:.x..x....:....x...xx.:.....x.:.xx....x..:.x..:x...:x:..:.:...--..xx..:..........:::xx......:::...x...............:...-...:............x:.:....x.:.::.:.:....x...x.-x::........xxx..::.xx..:xx..x:..x.x...x..x::x.:...x:..:.-----::......x.x::.:....-----...--------...::.::....---..x:....x..x.......-..x...------------....xx.::x..xx..:...:.x..:...:....x...::..x...:..::.....x..-....:..........x..x....:.x:.............:................:....:......x.:x........x:...:x:x.x....x.:x:::.x..xx...x..x...:::...x......::...-......:.:.......:xx:.x..x.::x.:x..xx....:....:x::.---:.......x.......:-.x::x:x.x..:...::x.::......::..:x:x..:-..x......-.xx..:.:.......x.xx.x..xx...::.... 19M6I22M8I6M1I14M4I6M3I10M3D15M1D75M2I54M1I44M1D56M5D19M5I3M8I12M3D19M1I6M12D59M1D137M1I50M3I17M1I38M1I9M1D34M 491/724 67.8% 769/94230402 0.0% 72/724 9.9% 35051288 NA +3727 chr4 + 190214555 95274895 95274894 95274968 74 GTGCGCCTGTAATTCCAGCTACCCAGAAGGCTGAGGCATGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:..........::::.........x.x..x...x::.........:.:..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 19241691 NA +17979 chr4 + 190214555 95276005 95276004 95276734 730 AAGATTCTTTAAACAAATAAATGAAATATTAAATAATGAATGCATTTATATTAGAAGGAAAATGGTCGTATAATCCTTTAACTCACTAAGTTACCTTTCATCCCTTTCTTTTTTAACGT--ATCTGCTCCTCTTGAGCAAATGGCAGTTGTAATATGTCATGTTAAGGTATTCAT------TAGTTTTCTGATCTTGGTGATTTTAATAGTGTTGAAAAGAATCTACACAGGAATT-TATTAGCCTGCTCTTGAGCATGTATGTTTGATCTCTCTTCTGACTTTA--------AAAAATGAAAAAGAAATGC-ATATTAAATATAGTTCTTTG-AATGTCAAATGG---GTATATGATTTTTGAGCTTGCCAAGTTTTAATTGGTCTCTTCCCTAGTGATGATACAAATAGAATTCACAGCCAATTAGTTTGCAGTCATGAATCTTTACTCCTTGACAAAGTGAACTACTTTGTCAAGGAGACTGAAAAAAATGAAGAAATTACTAAGATCTCCCCCCACCTAAAGTCTTTGCAAGGATCAGTTACCTTTTAGAAGCCCTGAGCAAAAATGATGCCATGGATACCCATGTTGCTCATGATCTGTTTTGGGTTTTAAGGTGGTTTCATGGAGG------AGGTGTGCATTAATATTTTAGAAATACCATTAAGAAGACATATGCACTATTGTCATTATCAAAATGAAATATTGAATAGAGAAGAGTTTTCTCCTTCCTAGTCGTATTAAATCATACTGT chr4 + 94230402 60223680 60223679 60224406 60223680 60223679 60224406 727 AAAATCCTCTGAACAAATAAAGGAAGTCATAAACATAGAATTAATTCATCTCTAAATTAAAATAATCATGTAATCCTTCAACCTACCAAGTTACCTTTCATCTTGGTATTTTTTAAAATTTATCTTACCAGCTTCACCAAGTGGCTGTAATAAAGTGTCACATTAAGGTATTCATATTCATTAGTGTTCAGGTCTTTGTACTTTTAATAGTGTTGGAAAGAATCTACAAAGAGTCTGTATTAGGCGGCTGTCCAATCTGGGTGTTTGATCTC-CTCCTGACTTCAAGAGTCAGAAGAGAGAAAAAAAAATACAACATCGAGAACAGTTCTTTTCAATGTCAGATGGGGAGTATACGATTTCTGAGGCTGCCAAGTGTTAATTGGTGTCTGCCCTGACCATGGTACAAATAAGACTCGGAGCC----AGTGTAGAGTCATGAGTCTCTGC-CGCTGACAGAGTGAGCCAGGATA-CAAGTAGGGAGAAATAAGT---GCAATTATTATGAGAGTAACTTGCAGAGGATCTTTTTCAGAGCTCACTTCCTTGTATTAG---GAAGCAGACAAGGCTACAGAGGCATCTTTGGTTCT-------TTTATTTGCCTTTACAGCAGCTCAGTGGAAGGAGGACAGGTATAATTTGA---CTTAAGAATAGCAATTACAA-------GTGCTAATGGCTGATGCAGAATG-TTTATAAAAGCAGAGAGAGCTTCCCTTCCACATGTCATGTTAAATCATGCCGT ..:..:..:.:..........x...:.xx....:.xx....xx...:..x.:x:..xx.....::..:.:........:...::..:...............::xx.x........x:.--....xx:.xx...x.x...:....x..x:...x:.....::.............------....x...x.:....x..:x..............:............x..::x:.-......x.x...x.:x.::x..x:...........-..:.......:.--------..:.:x......:....:.-.:..::.:x.:........x-.......:....---.....:.....:....x:........x.........x...x....:::x...:........::.:..:x....----...x.:x........:...:.:.-.x:.....:.....:.:.xxx.:-....x..:xx....x..:.---.x.....:..x..xxx:xx.:::.xx.:::.....x:x..::::x::.x....x..xx..---x:....:.x.x.::xx..x:.::.:.:x..x.x..-------.x.x..x.x:....x:.::.:.:x:....:.------....:.:xx..:.---:...::....x..x.x.x..-------.::...x..x.xxxxx..:....-xx...x:..xx::::....:..:.:::::x.xx...:.:.........:.:.. 119M2I54M6I55M1I35M1D12M8I19M1I20M1I12M3I73M4D23M1D23M1D19M3D60M3D35M7D31M6I13M3D20M7D23M1D53M 465/699 66.5% 727/94230402 0.0% 59/699 8.4% 35052325 NA +19260 chr4 + 190214555 95277924 95277923 95278366 443 AGAACAATAATAAAATTGATGGCACATTGTTAAGTCATACCATCTCTCTATGAT--AAGTGCCAGACAAAATAAAGCAGTATTTCTGATTTCTTGAAAGAGAATGACAAAACTAAACCAAGCTGCCTGTGGCTTTGTCCAATGGGGCATTCTAATTGACTCCCAAGTCATTAATCAGTTCCCAATCAATCTATTTTGCCAGCAGCAGGCAGTTAGGACTCTATTACCAACCATTCATCATGCCATACCCTAATTCACTGCACCATTAGCCATGGATTAGGCCTCTGTTAGAATAACTTAGTGCCAATTGCTAAATGCAAAGAATTGTTGTTATTCACCTCAGCCACTGGGATCCCTTCAGGTGGTCGACACTGGAGTAAGACTTCCTGTTCCAAAGACACTTCCTTTCCTAGGGGTTCCTGCTCAAATGTCTTCCGTAGATCTGG chr4 + 94230402 60225581 60225580 60226006 60225581 60225580 60226006 426 AGAAGAATAATAGGCTGG------TATCAGTATGCCCCACCACTTATATGTTGTTTGGATGTCAGACATAACTA------------GAATTTTTGAAAGGGAAAAAAAACCTGAAACCACACCACCTGTAGCTCTGCCCAGCAAGACATCGTAATTGCCTCCGAAGTCATTAATCAGCTCCCGATCAATCTTATCTACCAACAGCAGGCAGCCAGCTCTCCATTGCCACCCATTCATCATGCTAAGCCCTTATTCCCTGCTCCATTAGCCACAGATGAGGCCCCAGTTAGGACATCCAAGTACCAGCTGCTGGG-ACAAAACACCGCTGCTGCTCACCTCAGCTACTGGAATGCCTTCAGGAGGACGGCACTGGAGCAGGACCTCTTGCTCCAGGGACACTTCTTTCCCCAGCGGCTCCTGCTCAAAAGTCTTTCTGAGATCTGG ....x.......::x.x.------:..::x..x.:.x:....::.x.x.:.x:.--:::..:......x..:x.------------..x..:.......:...x:.x..xx:x......x:.::.....:...:..:...::::.:...:x......x....x..............:....:........xx.:.:...:..........::..xx...:...:...x.............:.x:....x....x....x..........::...x.....:.x.....:.:.x.:x...:...::....:::-:....:x.::.:..:.::..........:.....:..x........x..x..:........:.:...:..:..:....::........:..:..:..x..:...........x.....:.xx........ 18M6D30M2I18M12D228M1D130M 304/424 71.7% 426/94230402 0.0% 21/424 5.0% 35052343 NA +3008 chr4 + 190214555 95278451 95278450 95278494 44 TTTATCTGTGCTTTTTTTTCTTTCTTTTTTCTTTTTTTTTTTGA chr4 + 94230402 46198813 46198812 46198856 46198813 46198812 46198856 44 TTTGTCCGGGCTTCTTTTTTTTTCTTTTCTCTTTTTTCTTCTGA ...:..:.x....:.....:........:........:..:... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 49079638 NA +13428 chr4 + 190214555 95283523 95283522 95283949 427 CTGCGAAGGGAGGGTAGATAAGATTTTAAGCATATCTTTTATCATCT-GGAGAGATGTGATAGAAGGCAGGCCAGTTGCCTTGCAGGCAGAGTGAACACAGGGGTGACGAATGAATAAGAATGAAAAACGAACACTTGTCAGCTGGGAATTAGATGTAAAACAGAATGGTTCAGAATAATGTGGCCATTCCTGTCAGAAAAAAAAGACGAAGTTCTGCCCTTGGAAGACCTTTAGGATTCTACATTCTGCTTTCTTTCCATTAGTTATAAGACTGCTAC---------------------TAAAATTAAGTATG----------AAGTCCTTTCATTAATAACCTAGATTACTTTTGCAAAGTCAACTTGGCATGCATCTAATTTAGTCATTGATTCTGCCAATTAAAAGCTAT-CGTCATATGTATGCTTTCAGAGAGATGTTTACTTAAGAACATGAA chr4 + 94230402 60230575 60230574 60231022 60230575 60230574 60231022 448 CTGTGACAGGTGGGTGGGTAAAACTTTAAGGATATCTTTTATCATTTCTGAGAAACGTGAGAAGAGGCAGACCAGATGCCTTAAAGGCGGTTCTAATGTAAGGGTAACTAATGAATGAGAATGAAAAACGGACACTTGTCAGCTAGGAATTAGATGTAAACCATAAACGAACTGAACAATGCAG-CATTACTGTCAG---GGAAAGATGGATTTCTGCCCTTGGTAGACCTTAAAGATACTTTTTCCTGAGCTCCTTATAGTAACTCCA--ACTTCAACTTTCCTTCTATGTAAATATTTTAAAATTAAATGGGGGAAAAAAAAAAAAGCAATCTTTAAGAAAACAAA------TTGAAAAGTCACGTTTTTTTTTATCCAACTTTCACATTAGCTATGGCCACTGAGGGAAGTATATTTGATGTATGCCTTCAGAGAAATAAGTTCTTAAGAATTTGAA ...:..x:..x....:.:...:.:......x..............:.-x....:.:....x.::......:....x......:x....:.xx:x..:::.:....:..x.......:.............:.............:...............x..x..xx.xx.x...:....::.-....x.......---::.....:.:.x............x.......x.:...x..x:x.:...xx:..:..x:.x..::.x:.--...x.x..---------------------.........:.:x.----------..:xx.xx..x....x..xx:.:.------...x.......xx..xx:x.x:...:..:..xxx....:::.x..x.x.:.:.::.xx:.-::.:xx........:........:..:xx.x........:x.... 47M1I136M1D12M3D69M2D8M21I14M10I24M6D60M1I45M 290/415 69.9% 448/94230402 0.0% 45/415 10.8% 35052948 NA +6276 chr4 + 190214555 95289419 95289418 95289757 339 TTACTCACTTTCTGACCTAGGCCTGACCCTGCATTAAGCAAATAC-AGCTGCTGTACTATGATTCACA-TTTTCATATTTTCAGGT-GCTTTTCAGTTAATTCTTTTTACACACTCACTGAACAATGGTGTTGAACACATTCTAATATTTTTTTAAAAAAAGCTGTTTTAATATATTTTCAAAGTGCTCCTCTAGC-----AAATGATTTCATGGTCACTCAAAGTAATAATACT-GTGTTCTTAAAGGGAAAAAA------------------------------------------ATGTATCTTTCTTCCAATAATGATGGAAAGTGCTAATTATGTTGTCATAGCAGACTAGAATTTATGCTTAAATCACCAAATCTGGCTGTTAA chr4 + 94230402 60235069 60235068 60235429 60235069 60235068 60235429 361 TTATGTACTTTCTGACACATGCCTGACCCTGCATTAAACAAATACAAGCCACTTTTCCAGGATGCACATTTTTCACACTTTCGAATCACTTTCCAGTTAATTC-TATTACACGCTCAGTGAACAGATAAGTTGAATGC-------TATTTTTT----------TGTTTGTTTGTTTTAACGGAGTGTAGCTCCAGTCCTTGAGATGA---CACTGTAATTCCAG--AATAAGACCAGTGATTATAAGGGAGAAAAGAGAGAAAGAGAAGGTGAAGGAATAGAGGGAGAATGGCAGaatatatatattttttataat-GTGATAGGAATGGCAAGTTATGCTGCAGTTGCAG-CTG----TTGAGATGACACTACCAGGTTCGGGTATTAA ...:x:..........x:.x.................:.......-...::..x.x.:.x...x....-......:.:....:::.-:....:..........-.x......:....x......:xx:x......::.-------........----------.....xxx.:.x..xx.::....:xx...:..:-----.:....---..:x..x.:..x.:--.....x..:-...x.:x...:..::....:------------------------------------------..:...x...:..x:...-:....:.:..xx..x.:.....:..:x:.x....-..:----..:x.x.x.x.::....::.::..x.:.... 45M1I22M1I17M1I16M1D34M7D8M10D33M5I6M3D14M2D9M1I20M42I18M1D34M1D3M4D31M 218/310 70.3% 361/94230402 0.0% 80/310 25.8% 35054350 NA +3927 chr4 + 190214555 95292167 95292166 95292269 103 AATAATTCATGA------GATTACATATATATATACACATATATATACATATATATACACACACACACACACACACATATATATA-TATATATATATATATATATATAAA chr4 + 94230402 23247700 23247699 23247809 23247700 23247699 23247809 110 AACAATCCAAGATGACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAA ..:...:..x..------..::.::.:.:...::.....:..x...:x.:....:........:...........x:x.x.x.x:-..:..:x...x..........:.. 12M6I67M1I24M 73/103 70.9% 110/94230402 0.0% 7/103 6.8% 72044467 NA +3572 chr4 + 190214555 95292186 95292185 95292254 69 TATATATATACACATATATATACATATATATACACACACACACACACA-----------CACATATATATATATATATAT chr4 + 94230402 23247727 23247726 23247806 23247727 23247726 23247806 80 TGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:...::.:......x...:x......:..:.....:...........-----------:....:x...x.......... 48M11I21M 55/69 79.7% 80/94230402 0.0% 11/69 15.9% 72044459 NA +3092 chr4 + 190214555 95292206 95292205 95292254 49 TACATATATATACACACACACACACACACACATATATATATATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..:....:x....................x:...xx........::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 5468274 NA +3020 chr4 + 190214555 95292209 95292208 95292283 75 ATATATATACACACACACACACACACACATATATATATATATATATATATATATATATAAATTTTTTTTGTTTTT chr4 + 94230402 46140856 46140855 46140930 46140856 46140855 46140930 75 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAAGGTGCTGTTGATTTTT ................x.x....:.....:.::.:......:.x.:x..:.x.x:.xx.::.x:.x..x:..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 49151353 NA +3123 chr4 + 190214555 95292209 95292208 95292256 48 ATATATATACACACACACACACACACACATATATATATATATATATAT chr4 + 94230402 89823933 89823932 89823980 89823933 89823932 89823980 48 ATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ......:x.:..................x....xx........::... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 5468276 NA +3340 chr4 + 190214555 95292249 95292248 95292301 53 ATATATATATATATATATAAATTTTTTTTGTTTTTTTTTGAGA-------TGGAGTCTTG chr4 + 94230402 24792626 24792625 24792685 24792626 24792625 24792685 60 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTG ...................::..................x.:.-------....x.:... 43M7I10M 47/53 88.7% 60/94230402 0.0% 7/53 13.2% 70499623 NA +11543 chr4 + 190214555 95301600 95301599 95301766 167 ACTCACATGCAATGCGCACATACGCCTTCCGGCTCTTTGTGGTACCCGCGGAGCTCCAGGCCACACACTGGCACCAGTAATCTTCAGGTCCAAAGAGTTCTTCCACTTGCTGGCGCGAAATCTCAATGCTCACTTCCCGGACAATGAGACCTGACAAGAGAAAAAGA chr4 + 94230402 60237909 60237908 60238075 60237909 60237908 60238075 167 ACTCACATGCAATGCGGACGTAGGCCTTGCGGCTCTTGGTGGTGCCAGCTGAGCTCCAGGCGACACACTGGCACCAGTAGTCCTCGGGCCCAAAGAGCTCTTCCACCTGCTGGCGGGAAATCTCGATGCTCACCTCACGGACGATCAGACCTGGCAGGGTACAAGGA ................x..:..x.....x........x.....:..x..x...........x.................:..:..:..:........:........:........x........:........:..x.....:..x.......:..:.:x.x..:.. 167M 140/167 83.8% 167/94230402 0.0% 0/167 0.0% 35063691 NA +3512 chr4 + 190214555 95308729 95308728 95308841 113 CTGACAGAGTGAGACTCTGTCTC--------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAGAAAAACATGAATGGAAAGATATGTTC-ATGGATTAGAAAAACTAATATTGTT chr4 + 94230402 38128950 38128949 38129063 38128950 38128949 38129063 114 CTAACACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCAAAATATACCCTATGG--------AACTAATTTTGCT ..:...x.:.:...::x...:.:--------....::x..x.....x.:...:......x......x.......xx.x......x..:....:::.-....--------.......x...:. 23M8I65M1I4M8D13M 77/105 73.3% 114/94230402 0.0% 17/105 16.2% 57179779 NA +3260 chr4 + 190214555 95311877 95311876 95312096 220 CTACAAATAAAAATCAGAAAATTAGCTAGGCACGGTGGTGTATGCCTA-----CAGTACTAGCTGCTCAGGAGGCTGAGGCAGGAGTATTGCTTGAGCCTAGGAGTTTGACCTTATGGTGAGCTATGAT----TGCACCATTGCAC------TCTAGCTTGGGTGACAGAGTGA-----AATCCAATCTCAAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAA--CAAAAAAAAC chr4 + 94230402 76741790 76741789 76742014 76741790 76741789 76742014 225 CTACAAACGGA-----GAAATGTAGCAAGGCA----GATGCATGCCTTACATTCAATACCAGCCTTTTCAGCGGGTGAAAAA-----ATAGCTCTAGTCTAATA--TTGAAGCCATGCTATATTTTTATCTTCTGGATCAAAACACAAGACGTCTAA-TTGCACAGCATAGTTACACAGAAACCTTTCTTACCAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACAAAC .......:::.-----....xx....x.....----.:..:......x-----..:...:...:x:.:x:.x..x...::x.-----..x...:x..:...:x.--....xx::...x.:x::.x.x..----..x.:..xx:...------....:-...x::::..x...x.-----..x..xx...:.xx...............x..x..................--.x...x.... 11M5D16M4D12M5I29M5D17M2D23M4I13M6I5M1D16M5I51M2I10M 141/203 69.5% 225/94230402 0.0% 39/203 19.2% 18570087 NA +24794 chr4 + 190214555 95317051 95317050 95317485 435 AACCTTGCCAAAGGTTCATGTTTTACATAAAGCAGCAGTTGGGACTTCACAAAGGAAATCTCTGCACTTTTTATTTCTGGTTCAGAGGATTTACATGCTCTTTCTAATGATCTGGGCCTTCAGCACTGGGTAATGTCTCCCAGTGCCCAGCTTAGCGCTCATGCAAAATTGAAGCACTTTGGAGGCAGTTTAGTAGTTGCAGATGAATCTCAATGTGCAGG---------------AAAAGGCATAATGGCTGTTTAGCACTT-GCTAGGAGAAGCTGAGGAAATCAGGGGGAAAAA----TCTATTGAATTCAAGCCATCTGGGAAGCCAACTGAGAGCGGCTGCATT---AACAACGTGTTTACATTCCCATTGTGTTGCT------------AGGCCAAGCAAAAATAAGTGTGTGCGTGTGTGTGCATGTGTATATGTGCGTGTGTAAAGGAAATTATAAAGTGAA chr4 + 94230402 60246983 60246982 60247448 60246983 60246982 60247448 466 AATCCTGCCAGAGGTTCATGTTTTACATAAAGCTGCAGATGAGACTTCACAAAGAAAATCTGTGCACTTTTTATTTCTGGTTCAGAGGATTTACATGCTCTTTCTAATGATCTGGGCCTTCAGCAGTGGGTAATGCTTCCCAGTCCCCAGCTTAGTGCTCATGCAAAATTGAAGCACTTTTGAGGCAGTTTAGAGCCTACAGATGAATCTCAATGTGCAGGCAAAAAAAAAAAAAAAAAAAGAATAATGGTTGTTTAGCACTTCACTAGAAGAAG-TGAGGAAATTAGGGGGGAAAAAAATTCTATTGAACTTCAAACATCTGGGAAGCCACCAGAGAGCATCTGAATTTTGAACAGCATGTTTACATTCTCTTTGCATAGTGGAAGAGCTGCAAAAGGAAAGGAACAATAAATGGGTTTGTGTGTATATCTCtaaataaatatatttttta---acattttaaagtaaa ..:.:.....:......................x....x..:............:......x...............................................................x.........::.......x..........:........................x............x:x:.:......................---------------....:.x.......:............-:....:.....-.........:......:....----.........:.:x.:x..............x.x......:x...x...---....:.:...........:.x...::.x.:x------------.:.xx...x..x.....:..x..x:......:.::x.x.:x...x:.:::.x.x.x.---.x...x......:.. 221M15I27M1I11M1D21M4I48M3I31M12I57M3D15M 359/431 83.3% 466/94230402 0.0% 39/431 9.0% 35070068 NA +3736 chr4 + 190214555 95329151 95329150 95329227 77 CATGGTGGTGTGCCTGTAGTTGTAGCTATTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGTTTGAAGCT chr4 + 94230402 76033197 76033196 76033273 76033197 76033196 76033273 77 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ..::......::.x.......x:.....:...::........x:xx.x.:.x.......:.....:..:..x::... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 19295954 NA +8680 chr4 + 190214555 95333852 95333851 95334031 180 AAAGCTTATTTGTTTGAAATCTATACAAATACATGAGCTGAAACAAATAAAACTCAATCCACTTGAGATTTTGAAGACATCTGGTGGAGTTA-TTTTCTGAGTAATTAGACCAAGAGGTGGGACAATTCCCTGAAGTAAGCTACCCTATAATTGGATACCCAGTTATATCT-GCAGTCATCA chr4 + 94230402 60256726 60256725 60256907 60256726 60256725 60256907 182 AAAGCTTATGCTTTTGATCTCTGTACAAATAAATGAGCCGAAACAAATAAAAGCCAGTTCACAAGAGACTTCCAAGACATCTGGTGGAGTTATTTTTCTAAGTAATTAGACCAAGTGGTAGTGTAATTCCCAAATGAAAGGTACCTTCTTGCTTAGTATCCTACTATTTCTCAGAGCCATCA .........x:x.....xx...:........x......:.............x:..:.:...xx....:..:x...................-......:...............x...:.x::.......x:.x.x...x....:.x.x::.x::..:..x::...x...-:x..:..... 92M1I78M1I10M 136/180 75.6% 182/94230402 0.0% 2/180 1.1% 35077126 NA +18078 chr4 + 190214555 95335400 95335399 95335655 256 GAAAACTCACCGGAAGTTTCATCTACTCTTTCATCTACTATGTGGTCCTTCTGATGAACCCATTCACTATTACACTTGAAATAGATCTGGGTGGCAGGGCTTGCTTTACAGTACAGGTTCACGGGCTTATTCTTCACAATATAAGCTTCTTCAGGCTCAATAAGGAAATGTGGCAGAGGCTCAGGTGGATCAGAAGGAAAAGTTTCTGGGAGTTCATGAAAAAAGTCATCATCTGAGAAAGAAGAAGAAAGTGGAA chr4 + 94230402 60257770 60257769 60258025 60257770 60257769 60258025 256 GGAAACTCACCAGAGGTTTCATCTACTCTCTCATCCACCACATGATCCTTCTGATGAACCCATTCACTGTTGCACTTAAAATAGATCTGCGTGGCTGGGCTTGCTTTGCAGTACAGATTCACAGGCTTGTTTTTCACGATGTAAGCTTCTTCGGGTTCAATGAGAAAGTGGGGCAATGGCTCTGGAGGATCAGAAGGAAAAGTTTCTGGAAGTTCATGAAAAAAATCATCATCTGCAAAAAAAGATACAAGAAGGA .:.........:..:..............:.....:..:.::..:.......................:..:.....:...........x.....x...........:........:.....:.....:..:.....:..:...........:..:.....:..:..:..x....:x.....x..x.......................:..............:..........x:...:....x:x...x:.:. 256M 214/256 83.6% 256/94230402 0.0% 0/256 0.0% 35077630 NA +21898 chr4 + 190214555 95339636 95339635 95340540 905 TTTGTGAACAGCAACTTCAGACTGTGAACTTATTTCTGGCAACATGCCACAGGTATCCCAAATTATTACCTTTTCTATAAATGCACACCCCAGCTGCTGGTATTGACTGCATTGTGCTATCTGGGCAAAATGACTTGATTAATTAAATTGTGAAACACGTTTTGTACATGTAGTTCATTCAAATTAACAAGGTAAAATTTCCAGAGTTGCTTTTGTTCTGTACATTGAATTCAGTATTAACTTAACGCATTTTTGATTTAGATG----------TAACGCTATTATTCATTTTAC-CCTCCTCTGATATTTGACTTAATTTTCCAC---TTTCTACTATTACTCAA-TACTGACATTCCAACAGTAGTACCATTTTTATCTTGATATCA------------------------------ATAAATCTCAGT--------ATTTCCTTTTTTCTGTTATCTCACATAGGCTTTTGCTGTTTCATTTATACCCAAGAAGA----GA----AAGCTTTTCA------CCATGTATTATTTTTATAGACTTTCATTCCACCTAATTCTTCAC---------------AGGAATATATTATGCTATGAACATCAATCTAGGGAGC-------TTTAGGTTGCTGATTTTATTGCTAAATATCAAGCCTTAATTTTCATCAACTTAATACATAAGTTTCTATATTTCTGAATCATAAGACTTAAACTATTATTGCTTATATCATAAAATATAGGACCATTATCTCTTTGTCTGAGACTTGAAGCATACTCCTCTGAAATGGAATTTACTTCCAAGTGATTCAAGAGCAATTTAAAATGAATGACTGCAAAGCTAATGTTATCTGCATTTGGCTACCCATCCATCAGAGAGATAATTCATGATATATTACAACAAAAGGCAGCTGGAATTAACTAGTTGAATGAGACTCCAGCTT-ATTTTTAATATTTTGATTAAAATATCCTCAGGAAGACAAAGACTAT chr4 + 94230402 60261220 60261219 60262178 60261220 60261219 60262178 959 TTTGTGCTCAGCAACTTTGAGCTGCAAGTTTACTTCTG-CAATATGTCACATTCATCT----TTATTTTCACATAATAAAGTGTACAGCCCATCTGTTGTTATTGACTGATTTATGTTAGCAAGACAAAA-GACTTGATTAATGGTACCGCTAAACTGATTTCACTTATGCAATTCATTCATATTAAGAGAGTAAATTTTAAAAAGTC-CTTTTAATCTATAAATTTAATTTGG-------------AATTTTTATTTTAGTTGCTGGCCTGAATAAAGACATGCTTTTCTATGTGCCTTCTGTAGTATCTGAC--AATTTTATATATATTTTAAGTGCAAATCAAATGCAAAATCTATAGGAATAGGTAAAGTGTCAC--TGAAATCAGCACTGAAGCTGGCACAGAATGACGCATATAGAAATTTCAGTTCAATTTTAGTTTAATTTTCTAGGAAGCTAAAACAAACCTTT----------TTCTAAGCAAGAGCATTTTGATGTCAAGGTCTTTATTCTTTCCATGCACT-TGTTTGTAAAACTGTATGTATTACAGCTCTTCAAGCATAACAAGTGGAAAAAGAGATTTTATAGTACACTTCCCTTTTTATGGACTAGTATCACTAAGATCACTAGTTTTATTACTATATATCGAGATTTAATTCTCATCAGCCCAGTGTACAACTCACTATATTTCTGAACTGCGAGGCTTACACTATTATTGCTTAGATCATAATAGATAGGACCATTATCTCCTTGCATGAGACCTGCAGCAAATTCTTCTCAAATGGAATTCACTTCAGAATGAGTCAAGAGCAATTTAAAATGAATGGCTGTGAAGCTAATTCCGTTTGCATTTGGATGCCCATCACTCGGCAAGATCATTCCCTGTGTGTTGCAA-GGAAGGCAGCCGGAGCTAACTGTATGGATGGGATTTCTGTTTGGTTTTTAATGTTATGATTAAAAGCTTTCTAGAACCACAAGTATTGT ......xx.........::::...::.::...:.....-...:...:....xx:...:----.....x:.x:x.xxxx..:..:...x....x...:..x.........xx..:..:..x.x:.:.....-............x:x.::.:x....xx:...:::x:...:.:........x.....x.::.....x...xx.:...:-.....:x...:..x...x....::.-------------x......:x.....x..----------...x.x:..xx..:x:.x.::-...:..x.::...:....--......x:.:---...:x.x.::x.x....-.:.x:.xx:.x:.:x.:...xxxx.x.x.:.:--...x....------------------------------.x....:.....--------.x..:xx....::x.xx.x..x.x.:.::.:...----------..x..xx.....:x.----..----...x.:..:.------.....:.:.-.x...:..:.x:.x:..x:xx:x:.::......x---------------.:::.x..x....:x..::xx:x:.xx.:..x...x:-------:.x..:.::..::.......:...x.....:..x:......:......:.::.:.::.:..x.:x.............:::::..:....x..............x.......x.x................:...:x......:..x....x.:..:...x..........:.....x:.:...x.......................:...::........x:::.:.........x.:......xx..:.x:....x....x:x:.:.:..:...-::........:...::.....:xx..:...:..:.:.x.:..-:........:..x.........xx.::::..:.xx....:x.:.:. 38M1D19M4D68M1D77M1D25M13D17M10I21M1I18M2D10M3I17M1I32M2D8M30I12M8I34M10D15M4I2M4I10M6I9M1D34M15I37M7I278M1D42M1I46M 581/869 66.9% 959/94230402 0.0% 126/869 14.5% 35078416 NA +3092 chr4 + 190214555 95341450 95341449 95341512 63 TATAAGAAAGAGAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAA chr4 + 94230402 49233516 49233515 49233578 49233516 49233515 49233578 63 TATGAGAAAAAAACAGCTGAGGAGGAAAGAGAGAGAGAGAAAGAGAGATGCAATCTAGAGAAA ...:.....:.:.x.:xx:.:..:............:.......:...x.x..xxx....... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 46107934 NA +3391 chr4 + 190214555 95341451 95341450 95341568 118 ATAAGAAAGAGAGAAAGAA-----------AGAAGAAAGAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAAGAAAAAGAAAGAAAGGAGGGAGGG chr4 + 94230402 59372605 59372604 59372733 59372605 59372604 59372733 129 ATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGG ....x...::..:...x..-----------..::.::x...:.:.:......:...x..x...::.::.:.x..x..x...::::x..:x..x:...:.....x.:x..x..:......x:.x::.... 19M11I99M 74/118 62.7% 129/94230402 0.0% 11/118 9.3% 35968846 NA +3487 chr4 + 190214555 95341452 95341451 95341524 73 TAAGAAAGAGAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAA chr4 + 94230402 38078780 38078779 38078852 38078780 38078779 38078852 73 TAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAA .......:..:...........:..:.:..:....x.x...::.:xx.xx.x.....:..x.:..:...:... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 57262672 NA +3218 chr4 + 190214555 95341453 95341452 95341554 102 AAGAAAGAGAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAAGAAAAAGAAA chr4 + 94230402 49044726 49044725 49044827 49044726 49044725 49044827 102 AGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA .:.:.....xx...............:x::.:..x........::.:.:.:x..::x.:.:..xx:.::xx..:..:.::.....x:.:x..x..:x.x... 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% 46296727 NA +3801 chr4 + 190214555 95341460 95341459 95341596 137 AGAGAAAGAAAGAAGAAAG--AGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAAGAAAAAGAAAGAAAGGAGGGAGGGAGAGAGGGAGGAAGGGAGGGGAGGAAGC chr4 + 94230402 8397450 8397449 8397588 8397450 8397449 8397588 139 AGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAGC ...x.:..xx.....:...--........:..x.:.:x.:....:..x::.x:.::x....:x:.:..:......x...:x.x......x:x:.::x::..:..:.xx:...:.:....::.x..:::..x:.:::... 19M2I118M 81/137 59.1% 139/94230402 0.0% 2/137 1.5% 86944010 NA +3240 chr4 + 190214555 95341495 95341494 95341561 67 AGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAAGAAAAAGAAAGAAAGGA chr4 + 94230402 29014670 29014669 29014736 29014670 29014669 29014736 67 AGTAAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGA ..x.:.:x..::...xx.x....:....::.:.:.::......:........:.......:..x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 66326825 NA +3855 chr4 + 190214555 95357656 95357655 95357760 105 GTGGTGCATGCCTGTGGTCTCAGCTACTGGGAAGCCTGAG----GTGAAGGGATCACTTGAGCCCAGGAGGTTGAGGCTGTAGTAAGCATGAT--CAAGCCACTGTACTCC chr4 + 94230402 76033201 76033200 76033303 76033201 76033200 76033303 103 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAG----CACTTGAACCCAGAAGCTTTGGGCTGTAG--AACATGATGCCAAGCAGATGTGTGCC ........:.--...:..::........x.:...x.....----......----.......:.....:..x..x:........--.:......--.....x:x...::x.. 10M2D28M4I6M4D29M2D8M2I16M 78/97 80.4% 103/94230402 0.0% 14/97 14.4% 19324455 NA +13441 chr4 + 190214555 95358509 95358508 95358861 353 ACATTTTTACCTCTCCTGCCCTTAGAAATCACAATACTTGACACCAGGTCACAAAATTATTAAAACTTCAAGTGGCTACACTTCCTTCTCCACGTGAGTCCTCACTTCTCCTTAACATTTTACTCTGGCAATCCCTTCAGGCTTCTGGCCTTTTCTCCCTCCCTTTGACCCTCATAACTAATTAAATCTGGACAAGTCTTTGGTGAAAATAGTTTCCTTTAAAGTTATTCATTCAAAGTTCCCCTTAAGGCATTCTTTGTCACTTTAGCCC-AGCCTGCAATCTTTACATGAAGTTGAAAGAAGTGAGCTATTTTTATAAGATAAAAAA----ATCTTGCAAGACCTAAATCTACTTT chr4 + 94230402 60265460 60265459 60265808 60265460 60265459 60265808 349 ACATTTCTGCCCCAGTTGCCATTAGCAGTCGTAATGGTTGACACAAGGTCA-AAAATTATTGAACCTCCAAGGAGCATCATTTCCTCCTCAGTGTTAGGCTTCGCTTTTCTTTGACACATTAGTCCTGAAGCAGCTCCAGGCTCTTGACCTCT--------CCTTTAACCCTGATAACTAATTAAAGATGGACAAGGCTTAAGCTAAAATACTTTTCGTTAAACCTATTCATTCTCAAGTCCCCTTCAGGCACTCTTTATCACACAGGACAGAGCCCGACATATTTACATGAAGATGAAAGTAGGTGCCTCGTACAATAATACAAAAAATCTCTTTTTACAAGACCTAACTTAACCTT ......:.:..:.xx:....x....x.:..::...:x.......x......-.........:..x..:....x:..xx..:.....:...x::..x..x.:..:...:..:..:...:x...x..:x.x.::xx..:......::..:...:.--------.....:.....x.............xx........x...x:.:x......x...:.x.....x:.........xx.:x.......x.....:.....:....x:x:.x.x-....:.xx..x...........x......x..xx:x..xx.x:x....x.:......----x.:..:..........x.:x..:.. 51M1D101M8D110M1I57M4I25M 245/344 71.2% 349/94230402 0.0% 14/344 4.1% 35093049 NA +3252 chr4 + 190214555 95366177 95366176 95366260 84 TGATGGGCTGAGTGCACTGGTGTGCACCTGTAGTCCCAGCTACTCAGGAGTCTGAGGTGGGAGAATCACTTTAGCCCAGCAGTT chr4 + 94230402 76033184 76033183 76033266 76033184 76033183 76033266 83 TGAAAGGATGA-TACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ...x:..x...-.:...x.xx......x......:.........::::..x.....x:xx.x...x.....x.:.....x..:. 11M1D72M 59/83 71.1% 83/94230402 0.0% 1/83 1.2% 19332993 NA +24174 chr4 + 190214555 95371983 95371982 95372403 421 ACAATTGCACTGTTTCCTATCAATTGCCTCTTCAGTGCAATGCCTCCTGAAACCATTTCCTGAAACATGTAACAATCCTATCACATAATTGTGTAAAACCCTAGACACCCATGCCTGTTGTTTAATGCTAATTTCCTT-GAGCTTCCTAAGAGGAATTGCTATTGACTACTTTCATTAGGAAACTATTGACCCTTCTCCAGTGGAGCATCCTG-AGAAGAAATTCACTAAATATGCCCGTATTTCATCTTTTGAATATCAAGGTGCAGTAGGCATGCTGCAGGATATGGCTTATTTAATCCAAAATTAAAATTTTATAGGCTACATTACCTAAAGTAAATTGCTTAATACATTTAGAAGAACAGCTGCTTTCTAAGTGTTTGGCATCCATGTATTTGAGACCTAAATTAGGCAAACCCACTGA chr4 + 94230402 60278230 60278229 60278652 60278230 60278229 60278652 423 ATAATTAAACTGTTTTCAATCTATTAAGTAGTCAGTATGCTACCTGCTATAGCTATTTCCTAAAGCCTGTAACAGTCTAACCACGTAATCATGTAAAAGTTTTGCCAGTGGTGCTTGTTGTATAATGCTAATTTTCTTTGTGCTTACTAAGAGAAATTGCTATTGACTGCTTTCATTAGGAAACTATTGACCCTTATCCACTGGATCATCCTGGAGAAGAAATTCACTAAATGTGCAAATATTTCATTTTCTGAACATCAAGGTAGAAAAGTCATGCTGAAGGATATGGTTTATTTAGTCCAAAATTAAAATTTTATAGGCTACATTACCTAAAGTAAATTGCTTAATACATTCAGCGGAACAGCTGCTTTCGAAGTGTTCAGTTTACAAGTTTTCATGGCCTAAATTACACTAAACAATAGA .:....:x.......:.x...x...:xx.xx.....:::x.:...x..:x.:.:.......:..:.x.......:..:x.:...:....::.......x::.x.x..x:x:...:......x............:...-.x....x.......:..............:..........................x....x....x.......-..................:...xx:........:..:....:........:x.:x..x.......x.........:.......:.......................................................:..x:..............x.......::.:x.x..x..x..::x.:.........x:.x..x.x.:x.. 138M1I74M1I209M 334/421 79.3% 423/94230402 0.0% 2/421 0.5% 35093753 NA +3149 chr4 + 190214555 95376219 95376218 95376305 87 ATATATATCTTATGTGTATGTATATATATATGCATACACACAAATATATATTTGTTTTCAGTAAATTATTTTGTTCTTA-ATTCTGTA chr4 + 94230402 78835379 78835378 78835466 78835379 78835378 78835466 88 ACACAAATCTTTTCTGTGTGTATATATATAAATAGATACAGAAATATATATTTAATTCCCGGAAGTCTGTTAATGCTAGCATTCTGTA .:.:.x.....x.x...:............x::.x.:...x............:x..:.x.x..:.:xx..x:.x..x:-........ 79M1I8M 61/87 70.1% 88/94230402 0.0% 1/87 1.1% 16540840 NA +4409 chr4 + 190214555 95377139 95377138 95377334 196 GACAAAAGGAGTAGGCAGGAGGGCTTTATTGGTGGGGGTTGTATTTAATATTATTTCAAAATCACACTTTTCAATTTTCTGCTTTGTAATGAACTACAGCCAATTACTTCCCATCAACACTGATAAAAAGAGCTGTCCAACTGTTCAACATTTGCTTTGCTAATTGAATGATCAATTATTCAAATAAATGATTTTC chr4 + 94230402 60282679 60282678 60282857 60282679 60282678 60282857 179 GAAGAAAAGGGTAAGCCAGAGGAATA-ACAAATAGGGTTTGC-------------TTGAAATAATATTTCTCAGCCTT-GGACTGATAATAGAC-ACAGAAATATA-TCCTTGTCATCACATGCACAAAAGGCTGCCTAACTTTGTAACATTTGTTTTACTAATTGAACAATTAATTATTAACATAGATTATTTTC ..x:...:.:...:..x:....:x.x-.:x::.:...x...:-------------.::....x.:.:..:...:::..-x.x:.x:....::..-....xx.xx..-.:.:::...x...xx::.x...::....:.:....x.x:........:...:.........::..:.......x.x...:..x...... 26M1D15M13D23M1D15M1D11M1D89M 116/179 64.8% 179/94230402 0.0% 17/179 9.5% 35094460 NA +12978 chr4 + 190214555 95379094 95379093 95379404 311 AAGGATAACTGGGGCGAGGAGTAGAGAGACAATAAAGAAATAGTCTGATCAATAATAAATAGGATACTAAGAAACACCCCAGAGACTCCATGCCTCCAAGTTCACTTAAGTCTTAACGTACTTTACATTTCAAATCATATCTCACAAAACAAGTGATAGGATTACACTGCTAAATCCATAAGCATTGATTTTTGTCTCAGTCACAGATGCATGCTGTGCACTATTGGAAAATTTGC---TAAAATAGGTTTATGCCATACAATGACTATCATGTAGCAAGCACTCTATCTATAAACTTGCTGGAGTCTTTAACA chr4 + 94230402 60285003 60285002 60285305 60285003 60285002 60285305 303 AAAGATAGACAGAGTGACAAGCAGGAAAAAAGATAAGAAATGGATTACTCTTTAAGAAA-------CTGAAAACTCCTCTAGAGACCCTCAGCCTTCAAGTTCATTTAAACGTTAATGAACTTTACATTTCAAATCATATCTAGGAGCACACGTGATAGGATTACACAGCTAAATCTATAAGCATTGA-TTTTGTCTCAGTCACAGATGCACACTGTGCAGTATTGGAAAATCTGCGAGGAAGATAAGGTTATGACACACAGCAAATAGCATGCAGCA---GTGGTATAGATAAACCTTTCTATGTCTATAACA ..:....:x::.:.:..x:..:..::.:.x.:xx.......:.x:.:x..xx...x...-------..:.:..x:x.:.:......:.:xx....:........:....::x....:.x.......................x:x.:x...x...............x........:...........-......................::.......x...........:...---x..:...:.x.....x..:...:::.x..x....:....---::xx...xx......:.x::x:x....x..... 59M7D122M1D47M3I39M3D33M 219/300 73.0% 303/94230402 0.0% 14/300 4.7% 35094091 NA +13081 chr4 + 190214555 95382704 95382703 95383061 358 CTCTTTTGGCAATGGGATAAATAGCCTTGCTATCATTTGATTTTAAATTGATTCTCCTACTTAGCCACTGCTTTATCAATGCTTGGCTGAATGTAAAGCCAGAAGTGAGCAACTTCCTCAGGGTGCACTGCTTTTGATGGGTTAGCTGTCAAATGCTCCATTGTCCAAATTACACTGCTACTGTGGATTTCCTGCTAAGAAACAATTTACTGCAGCATTGGGCTATCAGTCTTGTGGGCTGT------GTTGGTTTTGGGGTATCAAAATCTGATTAACTTAACCGCAGATACAC-AGCAGTTCCT-------ACTGTTGC---TTTCCCCAAATTTCCATTTACTG-TATTGTTAGCAGGATATGATAACAGAGG chr4 + 94230402 60288761 60288760 60289123 60288761 60288760 60289123 363 CCCTTTTGGCCAGGGGATAAATAGCC--ACTGCTATTTGATTGGAAAACGATTCTCCTGGTTAGCCACTGCCTCATCACTGCTTGGCTGAATGTAAGA--GGGAGTGAGCAGCGTGCCGCGGGCGTGCCGTGTGTGAAGGGCTTACTGTCACACGGTCCACTGTCCCAATTACACCGCTACCCCGTATTTCCCACAAAGGAACAATTTACTGCTGCCTCATGCCATCAGTCTTCT-CCCTGTATTACAGTTGCTTTGTAGGTATCCAGAGCTGATTAA--------GGGATGTGCGAGTGTTTCCTTGAAGAGGCTGTCACATGTTTACTATAATTCCTATTCACCGTTGTTGTCAGCAGGCTATGGTAACTGGAG .:........x.x.............--:..:::........xx...x:.........:x...........:.:....x.................::--:.:........:.x.x.:xx...:.::.:.:x.x...x...:.x:......x.:.x....:.....x........:.....:x:.x......::.x...:.............x..x.::x..:.........x.-xx....------....x...xx:......x.:.x........--------x:...:::.-..::x.....-------:....::.---...x.:xx....:.:...:..:.-.:....:......x....:....x.::. 26M2D70M2D135M1D6M6I30M8D9M1I10M7I8M3I23M1I28M 252/345 73.0% 363/94230402 0.0% 31/345 9.0% 35093943 NA +7336 chr4 + 190214555 95393733 95393732 95394010 278 TATTCATTTGAAATTAAAAGCCTA-------------CTGATGTTTTATTACAGTGAGCTGTTCCAAAAATTACAGAGTTGCTTTCTTTAGAAATATAGAATCCAAATAGTAATTCTTATACAATCTACTGTTTTTTTTTTTTTAAAAAAAAACAGATTGCTATAAATCTCTCCTTTAGACA-CAAAGCCTAGAGGAC-AGTTTTGAATTTAAACAAGATTAAAGTCATGATAATGACACTCAGTTTTGTAAACCTATTCTCTGATCGTTTTATTAAGAAATGGAAAAACAAA chr4 + 94230402 60294574 60294573 60294838 60294574 60294573 60294838 265 TGTTTATTTCAACTTAAGGACTCAAAGTAGAGCTTCTCTGATGTTTTATTATGGACAGCTGTTCTGTAAATTACAAAG--GATTT---------TATAGACTATAAGAAGTGATTCGCAGGCAATCT---GTTTCCTT-----------AAGATAACTTACTAAAGGTCTTTCCTCTAGGCCTCAAGGCTTGCAGGAAGAATTTTGAATTTAAACAAGATTAAAGTTATGATAATAGTGTCCCATTATG-AAATCTGTTCTTGGCAAGCTACACTGAGAA--GGAGGAATAAA .:..:....x..x....:::.::.-------------..............::.xx........::x........:..--.x...---------......x.x:..:x...:....x:.x:......---....::..-----------..:.:.:x..:...x.::...:....:...:.x-...:..:.:x....x-.:.........................:........::::::.x:..x..-...:..:....:x.xxx.:.x:.:.:....--...::..:... 24M13I41M2D5M9D33M3D8M11D33M1I15M1I50M1D30M2D11M 177/250 70.8% 265/94230402 0.0% 43/250 17.2% 35099159 NA +15197 chr4 + 190214555 95394757 95394756 95395066 310 TGCAAGACAC-CAGTAAAATGCAATTCAGCAGCATAA---------GCGGCACTAGGATTGATGAAAAAAATGGAATAAGAATAAAAAAAAAAATAACTTCACTCTCCTCTATCTCTGACACCAAAAACAACAGGCTGTGAAAATAGTTTCATTAAAAAATAACAAGCCCATGCTCACCAGGGGATAGATCAGGGCAAACTGAATCAAAAATTCCTCAATCATTGCTCAAGTAGGTCAACTAGAATTAACTCAAAGGGCAAAGATTCAGAGTGAGCTGCCCATTTCTCACCAGTCTGCTTCTTCAGCCCTCCTGTCTGCC chr4 + 94230402 60295783 60295782 60296087 60295783 60295782 60296087 305 TGCGAGGAACACGGCAAGCTGCAGGCAGGCAGCTAAAAGTGACCACGCAGCATTGGGAACCCTGAAGAAAGAGAATAGAAGACAAACCAAAAAATAACCTCATTCGCCTTCATTCTCAACACCTAAAACAACAGGCTGTGAAAATGGTTTCATTAAAAAATAACAAGCGCATGCTCACCAGGGGATAGATCAGGGCAAACTGAATAAAAAATTCTTCAATCATTGCTGAAGTAGGTCAACCAGAGTTAATTCAAAGGGCAAACATTCACACTGA---GCCTGCTCCCCACC------------CAGCCCAGCTCTCAGCC ...:..:x..-.:.:..:x....:x:x:.....xx..---------..:...:.:...x:xx....:...:x.:.xx:.::.:...xx..........:...:..x...::..:::::.....x.....................:......................x....................................x........:............x............:...:....:............x.....x.x...---...:::.:.:....------------......xx..x..x... 10M1I26M9I228M3D14M12D17M 231/295 78.3% 305/94230402 0.0% 25/295 8.5% 35098974 NA +10255 chr4 + 190214555 95397704 95397703 95398164 461 AAAATTCAATCCTTTGGACAAATGT--CCGTATACTGAAAAAATAGCATCTAAGTTTTGATTGCCCTT-----------CAGACTATTTGACATAGACTTTACAGAACAAAGAACATTTAAATTAAC-----TGTGCAAAGCAAAGAGTAGAAATCATCTTATTATACAACATCAAGACAACTATCA-----AAACAT----TTCTTTAAA-ACTCATCTATATTTTAGAGCAGTAGCATTATTAATTGTCTGCATTCTGCCCCATCTTCATAATTCAATGTGTCCA-GTCCTACATCTGTTGCATAAAATTGGCATATTTATTGCACCCTTGGGACACAATTTCCCAATGAGAAGTAGCCAAATGTAGCTTTTTTTTTTTTTTTTTTTGCTTATGTAAAATGCTACAGTGGATAACATACATCCTTGCTCCCAAAGTACAGGAAGAAAATTTATATCATTAAACACATGCAAATGAAAACACAGGATTC chr4 + 94230402 60297553 60297552 60298023 60297553 60297552 60298023 471 AAAATTCAGCACTTGGGATAAATGGAGCCAGACTCTGCAGATGTGCTTGGGAAGCAATGAGTGCCATTACAGTGCATAACAGACAGCTAAGGCTGGTCTGAAGGGAATAGAGGGCGTTCACATAAGCGTTTCTCTGTAAGGAAAGCAATGTGGATCACTTCCTTGTGCTATTACAAGAAGACTGTTATAAAAAAAAATGTTATCCTCTAAATAGTCATTTATATTTAAGAGCAATTTTGCTATTAATTGTCTAAGCTC--CTCTTACTCCTTAATTCAATGTGTCCAAGGCCTGTTTCAGTTTCATAACACTGACATCTTTATTACACCCTTGGGCTATGATTTTCCAATGAGGATTGTCTAAATGCAGAGTTTTTACTCTT--------CCTGTGTAAAACGATACTCTCAGTAACCTGCAAGTTTATTCCCA---------TGGGGAATCCATAGCATGAAGTACCTGCAAATTGAGACAAAGCACCC ........::x...x...:.....x--..:x.:x...x.:.x:.:x:xxxx...:xx...x....x..-----------.....x::.x::xx.:.x..xx.x:...:.:..::.:..:.x..x.:.-----.x..:..:.x..:x.:.:x::....::.:x..:.:.x.:xx.....x:...:.:.-----...x..----.:..:....-.x....:.......x......:.xx:::............:x::..--.:.:xx..:.x................-.x...::x..x...x.....x.:..:...x......:..........x:.::....:........:.x.:x.:.....:..xx.....x:.:..--------.:.:.......:.x...xx.x::....x.:..xx:..::.....---------x:.::...::...x...x..::..x.......x:.:...x..x.::. 25M2I41M11I48M5I55M5I6M4I9M1I46M2D27M1I94M8D44M9D47M 285/442 64.5% 471/94230402 0.0% 48/442 10.9% 35100151 NA +9136 chr4 + 190214555 95398555 95398554 95398928 374 GACTTGCTAATAC---TGTCCATTTGAAAATAAAAACCCTCATTTTAATTACTAGGTTAGA-CAAAGCAATGAAGATGTATCTCCTGTTTCTTGTTT-CTGTTGCAAATTATGTATGTCTAGAAGACAATAGGGCATTGATTCTCAACCACAAGTAAATAAAGCATGTAGACTTAGTCTTAATGAGATAAGGTTTAGTCTGTGCCTTCTCAGTGGGATGGTTTTTGCTATTTTGCTTTTTAATTGGTAGCAAAAAACTTCAACAGTGTGTCCTTTTTCTGCCTACAGTGAATTCTACATGGGAATGGAGTTGCTGTAGAGAGC------TTTTGGATATAAATGCTGCTTTAGAGCTAATTAG----ATAAAAATCACA--GAAAAAAAGT chr4 + 94230402 60298804 60298803 60299184 60298804 60298803 60299184 381 GATTTCCTTGTACAGATGTGTATTTGGAGAGGAGACTACACACCACAGTTGTTAATTTAAAACAAAAGAGTGGAACTATTACCCTTTTGTACTGTTTTCTCTTGCCAATTATACATATCTGGAATACTTCACTGCGCAG-TTTTAAAACACACATAAACAGAGCATCTGGACTTCGTCTTAATGAGATAAAGTTTGGTCTCTGCTTTCTCAGTGGAATTATCTTCCCTG--------TGTAATTGGTAGC-AATGGTTTCAGAGGCAAGCCCTTGTTCTGTCAGCAGCACTCTGAGAGAGGAAAAGCAGGAGCTGGAGATGGCAGACTTTCTTGGGAAGAAAAGTTGCCTTTTGTCTAATTAGGAAAAAAAGAATCACATTGGAAAAAAGT ..:..x..x:...---...x:.....:.:.x:.:.x:x.x..::x:.:..::..:x...:.-....:x.:..:.:x.:.xx.:.:.x.x.x:.....-..x....x......::..:...:...x..xx:.xx..::x.-..:.x..x....x:....:.:.....x.:.....x...............:....:....x...:..........:..x:.:..:x..:--------.x...........-..x:::....:x:.::x.:....x.....:.x:...::xx:.xx:x:x..:..x.x..xx....x...x:..------.:....:x.x...x.:...:..xx:x........----.x..:.......--.:........ 13M3I45M1I35M1I41M1D89M8D13M1D72M6I34M4I12M2I10M 239/364 65.7% 381/94230402 0.0% 27/364 7.4% 35099751 NA +12251 chr4 + 190214555 95410950 95410949 95411296 347 TGTAATTTGTCAGGAAAGGGACAAATGCTGCAATAACAATGTCCACCTAAACT--GGCAAATGCTTGGTTTAATTGTCTCTACAAGTCAACCTAGCAGGAGTTCAGCAGGGGAAGCTGATGATCCAAAAGAAA--TTATTTTCTTATCTGTTATTGAAAATTTCAAAGAAAACACATGCCACAGCCCCTCGGGACA-AACCAGAGAATGACCAGG--ACAGGGAAGATGGATGTCTTCCAATGTCT-TGGCATATCTAACTTTAAGATATTGAGTATACTATCATAACTTTCTGCCTGAAACGTCTTTATTAGAGGAACAAGATTTATGTTTTTGGTCT----AGGGGGCAAAAAAAAC chr4 + 94230402 60306421 60306420 60306771 60306421 60306420 60306771 351 tgtgaGTTGTCAGGAAGGGGAAAAATGCAGCAATAATGGTGTCCAGCCCAGCTCAGTCAGTAGC--GGTTTAATTGTGCCTGCAAGACACCCTGGGTAGACTTAAGCTTGGGAA----ATCATAGTAGGGAAACATTATTTGCCTGTCCTTTATTGAAAATTTCAAGAAAACCAAATGTTACAGACTCTGGAGACTTCAGTAGAGAA--ACTAAGTGACAGGGAAGATAAATGCTTCCTACTGCCAATGACATATCCAACACAGAAATAGAGAGACTATTTTCATAACTTTGTGCTTTAAATGCCTTTATTAAAGCAACAAGATTTATGCTTCTGGCTCTGAAGGAGGGCAAGAGAAAC ...:.x..........:....x......x.......:::......x.:x.:..--.x..:xx..--...........x:..:....x..x...:.xx:..x..x...xx.....----..x..xxx.::....--......x.:.:..:x................::...x..x...::....x.:..x.:...x-x.x:......--..:.:.--...........::...::.:.:.x..:.x-..:......:...x:x:.:...xx...xx..:.x..........x...:.x...:.:........:..x.............:..:...:::----:.:......:.:.... 53M2I9M2D48M4D15M2I61M1I10M2D6M2I29M1I92M4I16M 245/339 72.3% 351/94230402 0.0% 20/339 5.9% 35104529 NA +7234 chr4 + 190214555 95418462 95418461 95418812 351 TAAGAAAGAAATGATGAAAACAAAATGTATTACAAGTAATCATGCTGTGATCTAAAATGTATATTTGAATAGGGATGCCATTCTGGGGTTGAGAAGTATAATATTTATAGTAACTTGAGGCCTACTTTTTACTATAATAACATGAATATCATTTACTGAGTAAGCACCAGCTGTCCATGCCTCTCTGACTCCTGACCATCTATTTAAAAACTAGAAAAAGAAAAATAGAAAACATGTTATCAAATACCTCTAGCCATTACATAGAACATGTGAAGCTTTCAGTGGTAA----------------------TAAAAAAATAT--CCAACTTTCTTTAGAAAGATGATAAACAATT---ACAGAGAAGTCCCTGTTCTTC chr4 + 94230402 60311895 60311894 60312233 60311895 60311894 60312233 339 TAGAAAAGAAAT--TGAAGACCAAA-------CAACTAAA--------GGTCTGAAACATTTCTTTGGAAGGAAAGATGATGCATAGGAACAGAGT----GTATTTATAGCCTACTGAGGCCTGTCTTTCACTGCAACAACAGGGACATCATTTACTAAACAAGCACCAGCTGCCTATACATCTCTGATGCCTGACCATTT-------AACCAG-----------TTCAAAAAGCTTCATCAAATGCAGTCATCTGTTAAAGAGAAAAGGCAGAGCTCTCAGTGCTAAGAATCAGGGGGaaaaaatatattaaaaaaatattGCTTGTTTCTCTCAAAGATATGGGAAATAATCTTGGTGGAAACATTTCTTTTCTTC ..::........--....:..x...-------...x...x--------.:...:...::.x.x....:.x:.::.x::x..x.xx:..xxx...:x----:.........:xxx:........:::...:...::..:....x.:.:..........:.::............:.:..:.x.......:x.........:.-------...:..-----------.xx....x::x.:.......:.xx::.x.::...x.x....x.x.:::....:......x...----------------------...........--.:x::..:::.:.:.:.x...:x...:...:---:::..:.x:.::..x...... 12M2D11M7D8M8D48M4D101M7D6M11D63M22I11M2I31M3I21M 207/312 66.3% 339/94230402 0.0% 66/312 21.2% 35106567 NA +19063 chr4 + 190214555 95422034 95422033 95422768 735 GACTGGTCCCAAGACAGCAGGCAACATGAAACAAAAAAGAGAAGTTCAAGACCTCAC---TGACGACAACAAGCTGCAGCAACAGCTTCCCAGCTGAGTGACACCAAGCCCATAATGGAAACGTTACTCGTTTAGGTAGGCACACATGAAATATTAATTTCCTGGATTGTCTGCATTTGCATAGTAATATTAAGTTCATCTTCTTGGCATGTTATGGTCTCAATTAGCAATTCTATTGTCATACCTGAGATTTGGGGAAGGAAGGAAAAGAGTAGGCTGTAGACAATTTCCCTCTGGAAACAGCAACACTAATGGAGCTTATCACTCCCATCATTAATTTAATCAAAAACCTTAAGGCAGAGGGCTAAAGCAATCTGTTAAGAAAACATTTTCTAAAATGAGAATGCTTCCCATTTCAATTAGGGTCTTGCTCTT-----TTTTTCTCTTTGAGACATGTTTTTTTCTCTCTATGCTCTCTTCCCCACCTCCCATACCC---GCCACTGATTAGATTTGCAACCGGGGGCTGTATTTTTTTCCAAAGAATGTTTTCTTGCAAACTGACAATTCTGCAACAACATCCGTCGCCTCAACCTTCTTAACTGACTTGTTTTTTAAGACATCTCAATTAGTTCAGACCCACTGTGCAAAGATAAAGTCCTTGTATCTCAGTGAGAGAATGCTCT--ACAGAGAATGGAGTTT-GCTTTACGGTGTGCATGTTAATACGCTATTCTCTTTAATTA chr4 + 94230402 60318704 60318703 60319420 60318704 60318703 60319420 717 GACTGCTTCCCCAAAAACAGCCACCAGGAAAGGAAAATGAG---CTCAAGACCTTGCCTGTGAGAGGAGCCCTCTACACAGACA-----CCAGCCCAGGGACAAGGAGTCTGTAATCAAAACACTCCTTGA--AAGGAGGCACACATGAAATATTTATTTCCCAGATTGCCTACATTTGCATAGTAATAAAAAGTTCATCCTCTTGGCCTACTCTGGGCCCTGTAAATGTTTCTAGCATTGTACCTGAGATCTTGGCGAGAGACAGGGAGGAAAGTCAATGGAAAATCCTCCTTTGGAAATGAGAGCCCTAGTGGAGCT--TCTTTATCAGCAGCAATTCAATCAAAA--CCTGAGGCAGAGTGTTGCAGCAACCTGTTAAGAAAACATTCTCTAAGACAGGATCACTCCTAATTTCAATTAGGCCTTAGTTGTTTGTTGTTGTTATTTTTTAACCCATTTTTCTTATTCCAGAACACTCCCTACCACTCCCAGTGCCAAAGGCCTTGGATCA-------------AGGCTAGGATGTACCCTGAAGAAAGTTGCTATGTAAACTGTGGATTTTGTGATGG-AGATGTTAC--TGACCTTCTTAACTGATGTATAGCTTATGACAGTTCAATTAGTCCAGA--CGAGGACCTACGATAAAGGCCTAGTATCTGTCTCTCTGCAGGCTCCCAGGAGAGGATGCAATCTGGCTTCACATTGTGCATGTTAATGCAGCAAGTTCCTTAATTA .....x.:..xx:.x.:...x..x..x....x:....x...---:.........::.---...x::x.:.xxx..:..xx:...-----.....:x..x....xx:..:.::....x:....::.x..:.x--.:.x..................x......::.....:..:................xx.........:.......x.::.x...x.:.x:.x.:::x.....x::.::..........:.x..x:..::.x::::..::x..x.x:.:..x...:::...:......:::x.:.x...:.......--..x:.x:..x..x:....:........--.:.:........x.:.:x.....:................:.....:.:::..x::..:.:x............x::.x.:.x..-----..x..x.:...x.:x.xxx....:..x.::.x:x:.x...:::x....::..x:.:..x---...x:x...:.-------------:....:x:x.x.x::.::.....x...x::x..:......xx:...:..::.:::-.xx:..::.--::..............:x.:.xx:...x....x:.........:....--.:xx.xx.x.x.......x...x......xxx.xxxx.x.x....:--:x....:...x.:.:.-....:..:x.............:.:x:.xx:..:....... 41M3D13M3I24M5D42M2D186M2D27M2D85M5I59M3I11M13D55M1D9M2D48M2D46M2I16M1I41M 458/703 65.1% 717/94230402 0.0% 46/703 6.5% 35103330 NA +3243 chr4 + 190214555 95424472 95424471 95424537 66 TGATATTTTTCTATGTAACAGGGCTTCAGAATTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72188218 72188217 72188283 72188218 72188217 72188283 66 TAATGTTTCTCTATGTAACTTCCTTTCTGGGTTTCTCCTCTCTGCACTTTTTTTTTTTTTTTTTTT .:..:...:..........xxxx:...x.::...:.::.:...x:x.................... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 23236254 NA +9591 chr4 + 190214555 95437656 95437655 95438043 388 TGTAATTAGCTTTCTTG---CAACTCTGCAAATTTGCAAGTAAGTTGAATTACCTGGGCCCTATTATTGAAATGAAGGTCTGCCATTGACGCTGATAGAGCATCAGTGGTAAGGTCTCATGCAATGGCACATGATTGTGTAAGAAAAGCAA-TAGCCCTACTAAGAAAACTTTGCTAAATTGTTTTGCAGCATCCAAAGAAATAAAA-TAGAGTGGTAGGATCTTTATCAGAGCCCAGGACTTCCGTGTGATTAATT---------AGCTGTGGTTTATTTGGATGGTAAAGATAAAGGCAGAGCTGCAGGTAAACTTT-GCACATTCATGCTTCTAAATTCATTAATACTATGTGTGAATTTTCTTTTCCATCACT-ATAACAAAACTCATGG---TAAAAGAAAC chr4 + 94230402 60329734 60329733 60330129 60329734 60329733 60330129 396 TGTAATTAGCTTTTCTGTCCCAGTTC----ATTTAGCAGTGGAGTTGAATAAGGTGGATATAATCACTGGAAAGCTGCTTAGACA---AAGCTAATGCAACAGGAAAGATAAGATCTAATGTAGTGCCATAGGATGCTGAAATGGAAGCAAACTGCACATCCAGAGGAACTCAGCTAAATTATTTTCCAGGCTGAAAATAAATAAAAATAGAGTGGCATTTTCCTTATCAGGGACAAAAAATTTTATGTGATTAATTCTGCAATTTAGCTGTAGTTTATTTGTGTGTTAGAGATAACAGCAGGGCGGTGGGTAAAAGCCAGCTCACTCATGCTCCTGACT--ATTAATAATGCGTGCAGATCTTATTCAC--TTACTGAAAGCAAAACAAAATGAACCAAAAGAAAC .............::..---..::..----.x..x...:xx:........x.xx...::x:x..:.:..:..x.xx.x.:x.x..---.x...:..:x.:..xx.:x.:....:...x...:.:..x..:.x...xx..x..x::......-:x..x.xx.:.::::....:x........:....x...xx.xx...x........-........:.xxx..:.......:.x.x.::.x..:::...........---------......:.........x:..x..:......x:....:..x.::......xx::-..x..:.......:..:.x.--.......x.::...:::..:..x..:x.--.:...-.x.:......xx.xx.---:......... 17M3I6M4D55M3D63M1I55M1I49M9I53M1I20M2D28M2D5M1I16M3I10M 255/377 67.6% 396/94230402 0.0% 30/377 8.0% 35107922 NA +4220 chr4 + 190214555 95440778 95440777 95440901 124 AATTTAAAA----AGTACTTATCAGCAA-CCATAGCTCTAACATGCTTTTCTTTAATAA----------ATAATAC--TTAACACTTACTGCTTACATCACAATTTTCATCTTCAATGTACTTTACAAACATTAAGTAATT chr4 + 94230402 73025539 73025538 73025679 73025539 73025538 73025679 141 AATTCAAAAGAACAGTGATCACTAGCAAGCCATAACTGCATCAGAGATCTCTTTAAGAACAGCTGTGGCATAATATAGTTAGCACTTAACTGGTACATTATTATTTTCCTTTTCAAAGCACTTTACAAACATTAACTAATT ....:....----...:x.:.::.....-.....:..x:.x..x:xx.:.......x..----------......:--...:......x:xxx.....:.:x......x.:.....x.:................x..... 9M4I15M1I30M10I7M2I63M 93/124 75.0% 141/94230402 0.0% 17/124 13.7% 22415239 NA +3041 chr4 + 190214555 95442811 95442810 95442867 57 CGCCAATACACACACACACACACACATACACACACAAACATATTCATGCAAATATAT chr4 + 94230402 74526067 74526066 74526123 74526067 74526066 74526123 57 CACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT .:....x.:x..............::x...:.......:....x.:.::.x..:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 20916744 NA +17976 chr4 + 190214555 95452254 95452253 95452502 249 GATAAAAAAAAAATCCCACATACTTCATTTTCCCTAAAGAGCAGCATGAGATTTCCAATCCTTTGCTTGAACACATAAAATATTAAGAGCCAATTTTCAGCTGCACCTCTGTCACTTCCATTATCATTCTACACGTCCAGAGGTGATAATGGACTCTGTAAATTGCAGTCTTTCTCCACCCCAGACCACGGAGGGTTTCACCAGGGGACAGTTCCACACAAAGGGTGGCCCAGATGTATGTTAATGGCA chr4 + 94230402 60338956 60338955 60339204 60338956 60338955 60339204 249 GAGGGAGAAAGAGACACACACACTTCGTTTTCCCTGAAGAGCAGTGTGAGATTTCCAATCCTCAGCTTTAACACATAAAATATTAAGAGCCAATTTTCAGCTGCACCTCTGTCACTTCCATTATCATTCTACACGTCTGGAGGTGATAATGGACTCAGTAAATTGCAGCCTCTTTCCATCCCAGACCATGAGGGTGTTCACCTGGGGACAACTCAGCACAAAGGATGGCTCAGATATATGCTAATAGCA ..x::.:...:.:x.x....:.....:........:........::................:x....x....................................................................::.................x...........:..:.:....:.........:.::..xx......x.......::..x:........:....:.....:....:....:... 249M 211/249 84.7% 249/94230402 0.0% 0/249 0.0% 35113298 NA +11400 chr4 + 190214555 95454419 95454418 95454646 228 ATAGTTTTTAAAGTTCAGAAGATTGTAATAGTATAGTAGCATAGCAGGAGGTACTGTGATTACATATG--AGTATTCTC-CAAAACGTTATTTTCTATGAATTTTTAATGATGCAA-GCAATTTTT-CAAGGTCACTGAGAGAGCAATCAGTCATTCAGACAGTAAATTTGTTCACAGTTTCTTGGCAGCTTTGCAAGAAAACAAGCAAGTGGGATTTG----------TGGAGGAGGGGAAA chr4 + 94230402 60340801 60340800 60341043 60340801 60340800 60341043 243 ACAATTTTGAAAGTTCAGTAGGTTGGATTACTCCAGCTGCATTTCAACAAGTACTAATTTTGCATGTGCCAGTCTCCTCACAAAAATTTCATTTCTATGAATTTTTAATGATGCAAAGTAATTTTTTCAAGGTCACTGAGAGACCAAGCAGTTATTCAGACATTAAATTTGCTCACAGTTTCTTGGCAGCTTTGCAAGAAAGCTAGCAAGTATGGTGTGCAGTGGCAGTTGGGGGAGGGAAGA .:.:....x.........x..:...x.x..x.x:..:x....xx..:x.:.....:xxx..:...:..--...x.:...-.....xx..xx.........................-.:.......-................x...x....:.........x........:.............................:.x.......:x.:.x..----------...:......:.:. 68M2I9M1I36M1I9M1I92M10I14M 184/228 80.7% 243/94230402 0.0% 15/228 6.6% 35113618 NA +8216 chr4 + 190214555 95457412 95457411 95457672 261 CAAATTTTGCTTTCAAAGAATTGTGGTAACAATATCAAATATTTCTACCACCTTTGTCACTTTTCATCTGTCTGGGAAAAGCACAAGAGATTCTACTCTCA-------------GGAACCAACAAAA---------CAAGAGCACACGGCTGAACGGCT-TCTGGTCTACACTCACGTTTCCCATTTGCCCGCATTTAATGCTGTTAATATTTCAGCAGCTGGAGTACCAGGGTCAAACTGAAGTTTT----TAACTATTTAATTCTGAATCCTCAGTCACAGATCTT chr4 + 94230402 60342255 60342254 60342540 60342255 60342254 60342540 286 CAGCTTTCGCTATCAAAGAAGCACTGCGGCAATACCCG-CATCCCTGTCACCCT-GTCACTCCTCATCTGGGCGTGCTGGGTGGAAGAGGCTCCCTGCTCGTGGCAGTGCGGGGGGAGCAGGGGAGAGAGGCGGCTCGAAGGAAAGCGCCTGGAGGAATCTTTGGCCTGCACACACGTTTCCGATTCACCTGCATTTAATGCCGTTAATATTTTAGCAGCAGCAGTGCCAGGGTCAAACTGAAATTTTGTACTCTCTGTTTCACTCTGAAATGTCAGTCTCAGACCTT ..:x...:...x........x:::x.:::.....:.x:-:..::..::....:.-......::.......xx:.x.xx::.::x.....::..:x:x...:-------------...:.x::x:.:.---------.:.::.x.x:..x...:.x.:x.-.:...:..:...x.........x...::..:...........:..........:......x.x...:................:....----.xx..:...x.:......x:x......x....:... 38M1D15M1D46M13I13M9I23M1I88M4I36M 176/259 68.0% 286/94230402 0.0% 29/259 11.2% 35115157 NA +8696 chr4 + 190214555 95464914 95464913 95465235 322 CTAAATAAGTGAACCTGAAGA--TCAAATGTTCAAATAAAATACGACAAGTG-GGTGTTAAATAATGAAAAAGATATTCT-TGTGGAGCTTTTCACAGAGAGATGATCCAGGCTGAACGTGTGTCCCCAG-------TGATGGTGAGAACCGTGGGACT-GCTGCCTAACATCTGCAGGGTGTCATAAAAAGCCTCACTA---AGGCGCATCGTTCCAAATGAATACCGTATGGGTCACTTGCAGGCTATGTTAAGTAAACAATAAAAAATTTAAAACAAACAGCCACAAAG---ACAGAGGAATGCTGAGGAAGGGAAGCAGATGAGTTATTTTGAAGA chr4 + 94230402 60347204 60347203 60347535 60347204 60347203 60347535 332 CCAAGGAAATGGACTTGAAAAGTTCCAGAGTTCAAGTGAAATGCCATAAGCAAGGTGCTAAATAATAAAAAAGAAATCTTGTACAAGGCTCCCCAGCCGCAGATGAGCC--------CACCAGTTCTCAACCTACTCTGACGGCCAAGACTCTGACACCAGCAGCCTCGTTTCTACAGGGTGTCAGAAAATGCATTACTACTAAGTGGCATCACTCTGAATGAAATCTGCATGGGTCAACTGCAGGTTAAGCTAACAAAACAATAAAAAATTTAAATCTAACAAACACAGAGCCCCCAGAGCACTCAAGAGAAAGCGCAATGGGTGGTTTCTTGTGTGGA .:..:x..:..:..:....:.--..x.:x......:.:....:.x.:...::-....:........:.......x..::.-.:::::...:::..xxx:x......x..--------.::xx..:.:..:-------...:..:x.::..:x..:x..:-..x....x::x...:..........x....x..x.:....---..xx.....::..::......xx.:.:........x:......:..x.:...xx...................x.x....:x....:..---x.....x.x.xxx...:...x.x.:::.:..:x..x..x..x:.. 21M2I29M1I27M1I28M8D13M7I22M1I40M3I89M3I45M 210/314 66.9% 332/94230402 0.0% 26/314 8.3% 35117710 NA +3092 chr4 + 190214555 95468120 95468119 95468190 71 TTTTTTGGGTTTTTTTTTTTTTTGTTTTTTCATTTCTTTAAAACTTTTGTATAAAGTACCAATCTTCCTTC chr4 + 94230402 54883387 54883386 54883457 54883387 54883386 54883457 71 TTTGTTGGGTTTTTTTTTTGTTTGTTTGCTTGCTTTTTTTGCAGATTTCTGTAAAACTCCTACTTTCCTTC ...x...............x.......x:.:::..:...x:x.xx...x.:....::x..x.::....... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 40584733 NA +24207 chr4 + 190214555 95472554 95472553 95473062 509 AAATGAATGGTTCATTTTATCCTTTGCAGCCTCATTTCACTG-----------AAGCCTGTTC----CCTGTGCTGAGCCCCATGGTACACATATAAATTCACCTTTCAATCATTTGTGTGGGTTAATGACACTGAGTAATAGCACATTAGCAAAGTGCCATTCCAGACACCAGCCAGGCATGCCAAACAGATAATCTGACAAT-CGTTTCAGATTCATTTTCCTCAAACAGAAACACTGTTCAGGCTTATTAACTGGCAAATTTGCATAAGGCACAATGTAGAGCACAGAGCCTCCATTAAAAGTAGCAATCTGTCTCATTAATGTAATTTACAAGGATATTTGGCCCGTTCTATTGTTGTAAAATCTAAAAAAAAAAAAATGTGTTCCTGT--TCAACAAAGCTGTCGTTTATTTGTAGCAAATTTTTATCATATCC----CTTATGCTCCACTGAAATAAAAAGA-TCACAAATTAGTTAATAATGAAACTGTTACTCAAATATCTTATACCTT--GCTCCCAACAGTACA chr4 + 94230402 60351284 60351283 60351805 60351284 60351283 60351805 522 AACTGCACGGTTCATTTTATCTCGTGCAGCACCATTTCACAGGGCACCGCATTAATCCAGAGCTCCGCCTGCTCTGAGCAGCATGATGTAAATATAAATTCACCTTTCAATCACTTCTGCGGGTTAATAACACTGAGTAATAGCACATTAGCAAAGTGCCACTCCAGACACCAGTCAGGCATGCCAAACAGATAATCTGACAAAACGTTTCAGATTCATTTTCCATGAAGAGAAACACTGTTCGAGCTTATTAACTAGCAAATATGCATACAGTGCGGTGCAGAGCACAGAGACTCCATTAAAAGTAGCAATCTATCTCATTAATGTAATATATAATGGTATTTGGACTATTCCATTGTCGT-AAATTAAAACATATATATATGTATGCTTGTTCTCTGTAACGCTGTAGTATATTTGCACTAA--TTGCTTCATATTCTCAGTTCACGTTT--TTGATGTAGAGGAATTTCCACATCAGTTTATGATGAAATTAT-------ATTTTTTGTTTCTCTAACTTTCAACAGTACA ..x..x.:.............::x......x:........x.-----------..x..x.xx.----....:x......xx....:.::.x......................:..x..:........:................................:............:............................x-...................x::..x.............::...........:......x......x:.::.::..:...........x.....................:...............x..:..x.:.......x.::...:.....:..-....:x...x.x.x.x.x....:.x.:...--..x::..x.....x..x......:.x:..--..x:x......:.----:.:.:.:.:--:...x:..:.:::.-.:x..x..:....x..:......:.:.-------..x.:..:.x:..:--:..::.......... 42M11I10M4I137M1I157M1D30M2I29M2D13M4I9M2D14M1I27M7D14M2I15M 391/497 78.7% 522/94230402 0.0% 37/497 7.4% 35121270 NA +4677 chr4 + 190214555 95480155 95480154 95480303 149 ATTCCTTATAATAAATAAATAAATGTGTGTATGTATGTACATATATATG-----TATACACAAGTATACATG-TATATATACATTCATAATGTATATAATGCATATATATTTATAATCATATACATATATGTGTTTGTGTGTGTATATATAGATA chr4 + 94230402 71715446 71715445 71715583 71715446 71715445 71715583 138 ATTCTTCATACTGA-TGCATGAatatatatata---atatatatatatgaagaatatacacaa-tatatataatatatatatatTCAT------------GCATATGTACTTGCAAACATTTGTACATATCTTTGTGTTTGTGTATACATAGATA ....:.:...x.:.-.:x..:...:.:.:...:---:..:.........-----.........-....:..:-........:......------------......:..:..::..x...x.::.:....x.x.x...x........:....... 14M1D18M3D13M5I9M1D8M1I15M12D55M 102/132 77.3% 138/94230402 0.0% 23/132 17.4% 23764709 NA +3126 chr4 + 190214555 95489082 95489081 95489137 56 GGAGAGAGGGAGGCAGGAAAGGGGGAGGGGGAGAGGAGGAGGGAGGGAGGAGGGAA chr4 + 94230402 24330662 24330661 24330717 24330662 24330661 24330717 56 GAAGAGACAGAAGGAACAAAAGGGGAAGTGGAAAGGAGGAGAGGGGGAGAGGGGAA .:.....x:..:.x.:x...:.....:.x...:........:.:.....::..... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 71158420 NA +21420 chr4 + 190214555 95499244 95499243 95499769 526 AACACCCTTAGGCAACTGCAGACCTGGTCACTG---------------------TCCCATCAGGAA-TGTTTTGAAGGCCAATAAACCACTCAGCCCCTGCCCTGTCTTTATAAATAATTCTCACCGGCTGTGGAGCAATGCTGGATGTGGCTTTCAGCTTCACCATGGTTACTTGAGAGCATTCTCAGGTATTGCTTCTATCCAAGCAGCCTTTGCCTCTGTGGGAAACCCCAGTGATATTCTGGGAGAAGTG-GCAAGGGCAGGTAGCA-TGACCATTCTCTTCTCTGGAAATCTCACTCCCATGCACTTTTCATGCAATCAATCATGAAGAAAAGGTCAACAGACAGCTTTCAAATAATGGATTTACTTACCTACTGACACTGATCT-GGCGAGAGAAGTGAAGTTG--TGGGGAGAAAAAG-GGAGGAGCACAGGAGTCAATTACAGGAAACCTAAACC-CCTTCAGTCTTCCAGGGAGACCAAACACACTCCAGTAAGCTCCCTCCCCTTGA----TCACAGGTATCTGCCAAAGCTATTAAGGTAAGTTTACA chr4 + 94230402 60368410 60368409 60368964 60368410 60368409 60368964 555 AGCACCCCTAGACAACTGTCACCCTGGGCTCTGGTGGCTCTCCAATTCCAATTCTCCAGTCAGGAAGTGTTTTAAAGGCCAGTCAACCACTCAGCCCTGGGCTTCTCTTCATAAATAATTCCTCTTGGCCATTGAGGAAGGCTAGCGCTGGCTTTCAGCTTCATTATGGTTACTTGAGAGCACTCTCCGTCCCTGCATGTTTGCAGGCAGCCTATTCCTCTGTGGGAAATCCTAGTGGGCTATGGGGAGCAGTGAAAAAGAGCCATCAACAGCAACTGCTCGCCTAGCTGGAAGCCACACTCCTGTGCACTTTT-ATGCAATCAGTCACGAAGGAAAGGTCAATAGACAGCTTTCAAATAACCGATCCATTTAACTACTGACATTGATCTGGGCCAGAGAAGTGGAGCTGGTCGAGGAGGGAGGGAGGAGGGGTTCAGCAGTCAATCAGTGAAAATCTAAACCTCTTTTGGCCTAATGGGAAGACTAAACACAGTCTTATGG---CTTTCTGCTTTAACTCTCACAGTGATCTGCCTAAGGCATTACAGGATCTTTACA .:.....:...:......:x:x.....x.x...---------------------...x:.......-......:.......:.x.............:x.x.:.x....:...........::x::...::.x...x..x...:.xxx...............::.................:....x.x:x:...x.x.x.x..:.......x.x.............:..:....:xx.x:x.....x....-:x...:..x:x:.:..-::..:::..x.:.xx......::.x......::.........-.........:...:....:.........:.................:x...::.:...x.........:......-...x.........:..:..--:.:....::.::.-.....:.:x...x.......:.xx.:...:.......-.:..::.:..xx::..:....:.......x..:x:.::---.::..:x...x.----......xx.......x...x:....x:.x.xx...... 33M21I12M1I187M1I16M1I42M1D75M1I19M2I13M1I37M1I38M3D12M4I38M 382/522 73.2% 555/94230402 0.0% 37/522 7.1% 35130834 NA +13737 chr4 + 190214555 95500551 95500550 95500907 357 AAATAATAAAATCAGCACCCTTGATCCAAGGTTCCTCAGCTGCATAAACAACAACTTGCTCTTATTTTGATTAAGGAGAGCTATTATATGTTCTTCCTCAAGCTATTAGTCTACTAGGAACATGTTGTAATTTATAAGGCCTATCAAAACTTTCCTTTTACTAAAATGAATAGAAAATTAATGCAGCCAGGCAGAAAGCTCTGTTAGCTAATAGTTTTTAGCATTTTCTCCTTTGAGATGCTA-----GAGAGCAATTTTCATTTACTGGTTATTTAAGGAAGAAAAATTCAGTCCCACTGATATCACCTTGATTGGGTTTATGTACAAATACCGTATATTTTTTCCCTTGGGCATATCATG chr4 + 94230402 60371640 60371639 60371993 60371640 60371639 60371993 354 AAACAGAAAAACAGGCTTTAGTGATCAACAGCTCTTCTGCTGGATAAACAACAATTTGCCCTTACTTTGATTACAGAGAGTCATTACATGTTTTTCCTGAAACTTTTATTTTGTAAGGAGCATGCTATAATTTACAAGTCCTTCCAAAACTGTCCCTTTAATGAAATGAATGGAAAACTAATGCTATCAGGGAGAAAG--CTATTAGTTAAGAGTTTCTAACACTTTCCTCTTTGAGGAAAGAAAGAGGAGAGAAACTGTCATTTACCACCTATCTAAAGGTGAAAA---CAGTGCAGCT--TAGCACCCTGATCCTCTTGAC-TATAGGCATCAGACATTTTGTGTTGTGGAGATGGCATG ...:.:x....:x:..x::xx.....x.x:.:..:..x....x...........:....:....:........x:.....::....:.....:.....x..:..x...x.:.::x....:....:.:.......:...x...x:.......x...:....x.:........:.....:......x::....x......--..:....:...x.....:..:..:....::.......:x:xx.-----.....x..:.x........::x:...:...:.:x.....---....x.x:..--..x....:....:xxx..x.:-..:.:::.:.:x.:.....x.x::x...:x..:x.... 198M2D43M5I39M3D10M2D21M1D38M 245/349 70.2% 354/94230402 0.0% 13/349 3.7% 35128911 NA +4505 chr4 + 190214555 95501748 95501747 95501841 94 TAGTTCTTTTTTCAGGA-TTCAGTTTTGAGGGAGTTTTGAATTTCACGTCTGATGCTACCTTTGAAAATATTCTTACAGTGATGAATGACCTCTT chr4 + 94230402 60372997 60372996 60373091 60372997 60372996 60373091 95 TAATTCTTCTCTCGGGAGCTCTGCTTTGAAGCAGGCTTGAATTACAAGCCTGACACTCACTTTGAAAATGCTCTCAAAGTGATGAATGTTCCCTT ..:.....:.:..:...-:..x.:.....:.x..x:.......x..x.:....::..xx..........::...:.x...........x:.:... 17M1I77M 69/94 73.4% 95/94230402 0.0% 1/94 1.1% 35128751 NA +11983 chr4 + 190214555 95505126 95505125 95505437 312 GTCCGTTATCAGAATTTGATTCT-AATTATTCATTGGCAAGGAACAATTTATTGATTAAGAACAGTAGCAAATGAACAACTTACGGCCTCCAAAGTGTAACCAC-CCTGGTACAGGTCAATAGAACTAGGCAAACAAGAGGCCAATTCAAGAGT-TCCTGTCCAATTTCCTTCCACAGCCAGGTCTTTATGAGCGAGCAGTCATGGAAAAGATCCTAGAAAAATAAACTGTGGAAACATTTCAGCAACTTAATTGAGATTTTGC--AAGGCTCTCAAAGCCTGCATTGTTATAACCCACTCTCATCAAAGACCATGA chr4 + 94230402 60377561 60377560 60377872 60377561 60377560 60377872 312 GTCCATTATCACAACTTGGCTTTGAATCATTCATTAACCCAAAATGACTTATCTACTAAG--CCAT-GCAAGCGAGCAGCCGA-GGCCTG-AAAGTGCCACAAGGCCTTGTGCAGGTCAGGGAAGCCAGGAGAACAAGGGGCCAATTCAGCACCAGCCTACCCTGCTTCCTTCCACAGCCAGGTCTTTACGAGCACGCAGCTCTGGAAGGGAGCCTAGAAAAATAAACGGTGGAAACATTTCAGCAACCAAATTGCGCTGTAGCGAAAGCCTCTCAAAGGAGGCATTGTTCCAGCCTGCTCCCACTGAGGGCTACAA ....:......x..:...::.:.-...:.......::.xx::..::.:....:x.:....--.x:.-....::..:..:.:x.-.....x-......:x..x.x-...x..:.......:x::.:.:...x:......:..........:x.x:-x...::..x::.......................:....:x....::x.....::..x...............x...................:x.....x.x.x.x..--...x.........xxx........x:.:..::...:..:::.:.:.:.::. 23M1I36M2D4M1D16M1D6M1D13M1I49M1I109M2I51M 220/307 71.7% 312/94230402 0.0% 10/307 3.3% 35127565 NA +13990 chr4 + 190214555 95510828 95510827 95511246 419 TCCGAAATTTGCCTCGGCATTTTCCTAACTTGGTTTGTCCCTTCTTTTACTGGGCAGAACAGGATCCACATAT-GAAGAAAAAAGTGGTTGAGTTGTTGTCAGAGACAATTAAAGTCT-TCTTCAGGTCCCCATTAGCT-AGTGCCCTGAGAAACGGGTGGAATGATTTCATAATTTCTGTTGAATATAAAAGGACACTGATACCCTG----GGGATATTGATTCAGAAAGACAGAAAGAATAGCTGGGAAGCTCTTTCAGTGATAGAGAAGTTAATGATTTTGTGATTCATCCAAGAGAAATG---CCTTACAACCTTTGATAATGGCAAG-----GCAGATAGTGCCACTG---CTGACCTTGTCAAATTAGCAGAAGCTAATAATATC--AGGGCAGAAGACAAACCTAAGCACCACAAAGGAGAGTTTAGCAACA chr4 + 94230402 60382172 60382171 60382606 60382172 60382171 60382606 435 TCTGAGACCAGCCTTAGCGTTTTCGTAACTCGGTTTTCCCCTGCTCCAACAGAGACGTGTAGGATTGATATGCAGACAAGAAAAGCGGTTGTGTTGGTGTCAGGGACAATTAAGGTCTGTGCTCCCGTGCCCATTAGCTGAGTGA--TGCGGAGCTGGTGGAAAGCTTCAGTTGTTCCTGCGGGGGATAGA-GGACATGGATACTCTGTCTGGGGATATTGATTGAGGAGGACACAACAGGGAGCTGA-ATGCTTTTGCAGTGACACAGAAGTTAATGATTTAGCAGTTCATGCAAAAAAAAAGACACCTTGCCACCTTTGGTAATTGTTTGCATTTGCAGATAGTGCCACAGGAACTGACCTTATCGAATTAGCAGAAGCCCAGAGCACCGTACGGCAGGTAGCTCACTGCTAAACTATAGAGAAGAGATTACTGACA ..:..:.::x....::..:.....x.....:.....x:....x..::x..x.:.xx.x::.....:x.:..::-..x:.:.....:.....x....x......:.........:....-.x:..xx..x..........-....x--..x.:.:.x.......x.x..:x:.x:..:...:x.::x...:.-.....:x.....:...----............x..:.:....x..x:::x.....:-.x...:..x......:.x...............x.:::.....x...:.:...x.---....:.x.......:....x.:xx.-----..............x.---........:..:.............:x.x.::.:.--.x.....:x::.xx..:xxx:x..:.:.:..:....x...x::... 73M1I44M1I20M1I5M2D44M1D16M4I36M1D55M3I25M5I16M3I35M2I46M 292/415 70.4% 435/94230402 0.0% 24/415 5.8% 35128656 NA +12729 chr4 + 190214555 95513086 95513085 95513344 259 TGCTAAATATGTAAATCATACTGAA--TGACCGAGGCTAAAAGCAAAGTGACAGTTGACTGTGACTGCCATTAACCATGGATTACATCCCGGC-ATGTAATGCAATTATATGGCAGGAAACAACTAATGTGGGCTGCTCTGGTGGGAGAAGGGAGAAAATATTGAATTTTTCT-TTGTAATCTATTTACATCTTGCAATGGGAGCATTAGTCAGATTAAGGTTCAGAATGCCAGGCGCACACCAGCCCAGTGTGCTAAGTGGT chr4 + 94230402 60384097 60384096 60384347 60384097 60384096 60384347 251 TGTTAAGCACGTAAATCATACTGAACATTACCAA--TCTAAAGGGAAGTGACAGATGACTGCGACTGCCATTAAATGTTTATTGCATCCCTGCCATGTAATGCAATTAGGTGGCAAGAAACATGTAATGTGTATTGCTCTGGTGGGAGAATGGAGAAATTATTGGATTTTCCTCTCTTAATCTATTTATATCTTGCAGTGGGGGCATTAGGCAGATTAA----------GCTAGGGACAGTGCCGTTCAGTATGCTAAGCAGT ..:...::.:...............--.x...:.--::x....x:.........x......:............x::.xx...:......x..-..............x:.....:......xx.......x::................x.......x.....:.....:..-.:x...........:........:....:.......x........----------..:...x:..xxx.x.::....:.......::.. 25M2I7M2D57M1I79M1I45M10D34M 197/247 79.8% 251/94230402 0.0% 16/247 6.5% 35128989 NA +6751 chr4 + 190214555 95517894 95517893 95518276 383 AAAGATAATGTTTGCTACAAAAAGGAATAAACCAGTAGACAAATCACATTTATAAACTCTGCAAGTGACGTGAGTGACGTTAAAACATCTGGGAGACGTTAGAGACTGCATTAACTCTAATCATGGA---------TCACATTATGGCAGAT--TTCTTTTTTCCTTAATGAGGAGAAAAGA-------CTGAGATAGTGAACGTGTT-ATTCAACATAA-----CCCTTCAGTCCTTGTCCAAGAACTAATAAAGCACCAGAGAGAAGGCCTTGCTCCATCAGAATTCCAGAACTAAGGGTAGGCAAT----CTCCTTTATGTTTGGCCTATGTGTCACTGGGGATAGTGTCTGAAAAAACAAGGCCCATTTTCTCACTCCAAATAAATCATGGACTATCTAGCACCCAA chr4 + 94230402 60388920 60388919 60389285 60388920 60388919 60389285 366 AAAGAAATTACGAGCAACAAAGAGGAAT--------------------TTTATCA---TTAAAACTGATGTGTGGGACTATAAAACATCTGGTAGGTGTTAGTGACTGCATCAGCTGTAATCACAGAGCATGCTATCCACACTCTGAGAGCTGAGTCTCCTTGACTTAAAGGAGAAAAAAGAAGTCGGGAGAAGATAGCGAACATGTTAACTCAGCGCAAGCTGGCACTACAG--------CAAGCACTGATAACATACCAGAG-GGAGGCTCTGCTTGTTC-----TCCAG-----AGAGGAGACAGCCCTGCTCCTTTCAGCCATGTTATAGTGTCACCCCTGACAGTCCCTCAGGAAACACCGCC---TGCCTCACTCCCAATACATCAAGCTCTGCACAGCCTCCAA .....x.x.::xx..x.....:......--------------------.....x.---:.:x..x...:...x.x...xx............x..::.....x........:.:..x......::..---------:....:.x..:x..x.--x...::..xx.....x.::..:......-------xx:......:....:....-.:...:.::..-----.x..x...--------....x...:....x::.......-.:....::....:xx..-----.....-----..:.x..:..::----.......xx.::xx.::xxx.......:xxx..:...x:..x.::.....xx...---.x:........x....x....x.xx..::x:...x:.... 28M20D7M3D69M9I16M2I28M7I19M1I11M5I8M8D23M1D17M5D5M5D12M4I55M3D40M 233/338 68.9% 366/94230402 0.0% 73/338 21.6% 35128974 NA +20098 chr4 + 190214555 95529939 95529938 95531535 1597 AAGTT--TAGGTAATTCTTGAATCTGTCTTCCATATTTGGTGTCCACTTTGAACAA--CAACTGAAATGCTCTGCAACTTGCATATATATTTTTAGATGGGGCTATCTTAAGTGTAATGCATCAAGTGTGACTTAAGTTTATTTTTATTTAGCTACAGAGATATTTTCCTTTACATTTTTGAG---GGTTGGTCTCTCCTGGTAAATTTCCAGAATAAATTTTCTGTCTTGCTTTTAAGTGGGGCAAGATTCTGACATATAACTATTGTGGGAGCTGAAGGCATTTCTGGCAAGTGCAGTGAATGATTGACTTTTCCATTTGTTTTCATAATGATAAATATATAGTTAGCATTAGGCAGGAAAATAA-GTATTTCCA-AAAATATATGCTAAGCACATCTGGTAATGAATGGGGTCATACAGATATATCATGACTCCCCTCTCCATTAGGAGGTGTTCAGTTCCACAAAGTTCATTCACTCCCACAACAGAAAAACAAACACAAAAG-----TGTATTCTTACTTGGAAAAGAAAGAAAAATAAAATTCTTCATTTAAAAATGCAA-----AACACTACCAAG----GCAATTATGTTTTGTTGGCTTTCTTTAGTCT------ATGCCTCATA---------CAACAGAATTTCCTGTAAGTTAATACTAACCACAGTAGTGCATAGCTTGAGAGAAATATTGAAGTATATTGCACTATCAAAATAACAACGCTAAGT-----------------GCATTTCTAAAAGTGGTGCTGGCATCATCAATTGACATTTAACAGTTCCTTTATAACATGATTAC---AAGTTTCTATCGAAGATACAG-----CATCTTATCATATGGCTT-----------ATTATTCT---TCATA---------AGTTGTATTTAGAA----AGGACTTTTCAGAAAA------------------AAAAGTG-----AAAATTGAAA----------ACTGCTGCTGAAAGGTGCATTTTTGTGCAG-----------------------CACTTGACAAGTAAAT---ATATTTGGTCATATATGAATATGAAATCAAGA-----TTCGATGACCTTT-----------------------------------------------------------------------------------------------------------GAAACCATCA----------------------------------AAATTAATTTAAAAAAGGAA-----GTGTGTCATTCATCCAATATAT-------TCATGTGATTCTTACTAAAATAAAGAACAAAGCTTTGTTTACATC-------ATAAATAAACCTTTTAATA----------ACCGGAAAGTCTAATGTTGTTAAATCATCCCTTTTCTGAAAGTGGAGTCCAGCCTTGTTTT-----AGACTTCATAATT-TAATAGT-------ATTTAGGTGTATGGA-AGAAAGACTAAGTTAACTTGCATTAATGGGATTCTTAAATTT-----------TTCTTTGTTTCCAGAGAAGTATTCTTTTAAGACTGTTTTCAAGCCAGTTTTTCCTTAAATGCTGTTTGGTCTAAATTGACAGTCTTGAAGTCTTTCCTAAAGTAATGTTT--------AAACATCTCTCTGGCATTCCATTATGGGCACCTGCTGCTGATAATTACAGGTCTGTCTCCTAACCACTTCCTCTGCTTTATGTCAAAGCAAGATTCAGGCTGCTTGATTACAAACAACTACCAGTTAAAGACCAGTGCACAGCTCTCTGCGGTAATTATGCAGGGCAAGTTGGGTCTGTGTTTACTGAAGTCTTAGGAAACAAGAAGCAGTTAC-TTGTTATAATTTCCTCTTTGCTAGCAGT--GTAGCATAATCCACAACATATTTTGGTTACCTTAA chr4 + 94230402 60396722 60396721 60398587 60396722 60396721 60398587 1866 AAGTTAGTGGATAATTTTTGATCCACTGTATCATGTTTAATGTTAAATCAAGCCAAATCCATAGATACACACAGCCCTTTAAATTTGTTCCTCT-------GTTAGCATAA-TATACTGGGTCAAGTGTGACTACTGTTTATTTTAACTTTGCAAAATTGAT-CCCAGCTTCATATTTTTGAGAAAGATCGGTCCATTTTGGTACAGTTCCAGAATAAATCCTGACTGTTCTTTTAAAGTGAGACTGAGTTTTGACATACCACCATTGTGACTGTGGCAAGCATTTCTGGCACACATAATGAATGATTGACTTCTCTGCTTGTTTTCATAGCGATAAATATGTGGT-ACCATTAGGCAGCAAAACAAAGTATTCCCCCAGAATCCCTGCTAAGCATATTTTGGAATTAATGGGGTAATATAGATCCATCATGCTCTCTTTCTATGCTAAGAAGTATTTGATTCCATGAAATTCATTCACTCACACATAATTTAAATAACCAAAAAGGAACATTGTATTTTCCTTT--------------------CTTCTGCATATGTAAAAAGAGCTGGCAATCTTACCAAGTTTAGCCGTGCAATCTCGTTAGGCTTCTATAGATTTCATTAATGACTCATAAGAAAGATTCAATAACAGTCCTTGCACACCAATACAAA----------------------AAAAATATATATTCTCATTTACTTTTCAAGATACAAAAAAGAAATCAATAGACATCAGCGACGTTTTTCTGATGAGAGCTCCCGTAACACAGAATTTAGATTAATAATTCTTCAAAGATGTTCCTGCTCTAAAATGCTTCCTAAGGGGCTGTTCCTCATCTTGTCAGAAAGTTTTGGTAGCATCCCTTGTTCTAGGCCATAGCCTTGTGCAGCTGCACACAGAGGGATAGGACTATTCCCACACTGATACACAGACGCTTGCAAAAGTGTCCTTGTACTTGAAATGTTAATAGGACTGGTCATGAGAGACATGATTT-GTGCAGAACTCTGCCTTCCCTCCCACTTGCACTTTACATTTTCATTTGACATTTTCCCAT----GAGTATGAAACCCCAAAGTGCTTAAATCAACTTTATCGGTTCTTTTCACATAATGTTTTGCTCCAAATCCCTCACCAAAACACCTCATGTTCTGCTATTTGTTGTTGTTGTTTGGCTCTGCAGTTTTTTGTCTGGCGTTTAGAGACAATCATGACACTACGGTATCTTTTGTACTGAGCAAAAAGAACCTATTTGGAAAACTGCACCTCTGAGTGTTGCCCACACCACACACAGACTCCTGAAATAGTTTTTGTATGAATAAGGAACGA------GTTCCCATTGAAAAAAATAAATAAATGACACAACATTAAGAGATTACTGGATGGC--AATTTTATTTTTTTGTCTTGCTTCTTAAAGTA-----CTACTTTGTTATTTAACAGGCCTTGTAATTACAACAGTGTAGATGATAAAAGCATACGGATAGTAAAAC-------ATTTATTTTAA--GAACCCTTCAATTTACATGACTTTCCTTTTGGTTTTCATAGAG---TGCTTT----ACCGCT--CACCCCAGCTCTAACTGACCTGCCTGCCAGCCTGGTCTGAGGCTACTAAGGCCTATCCCAAAGCAGCATGTGCCTCTCCAAACATCTCTCTGGCATTTCTTTATGGGCACCTGCTGCTGGTAATTATGGGCCTGTCTCCTAACCACTTCCTCTGGTTTATGTCAGGGCATTACTCAGCCCCCTTGATTGCAAACAAGCCCCAGTAACAGAGCACTGCATGAGCCCTTGTGGTAATTAGGCAGGCCCAGTCAGCTCCTTGTGTGCTGTG--CCTGCACAGAAAGGAGTGGTTTCTTTATAATAATCTTCCTTTTGTT-GCTTTCAGTAGCATAATGCAGCACACGCTTTGGTAACCCTAA .....--.:.:.....:....x:.xx.x.x:...:...::...:x.x.:x::x...--.x.:x..x.::.x.x..xx:..:x..x.:.x::.:.-------.:..x.x...-.:..x..x:............xxx.........x.:..x..x.x.xx...-:::xx...:.:.........---.:.:....:x.::.....x.x.............::.xxx.x..x:...x.....:.:.x:::..:.......:x..:......:xx.:x.x.:............x::::.:..............:..:::...........::.........:.:..-.x..........x....:..-.....:..x-.:...x:x.........:..:.x.x...x........x...:....x:......x:::.::...x:::..:..:..:..:::.....::..:...........x....xx.xxx...:..x..x...:.-----......:.:x:..--------------------x....x...x.:x...x:x.:-----..:x:.......----..x:.xxx:.:.:...:.x:....x...x:.------...x......---------...:.:x.x.:.:..:.x:::.....x..----------------------.:......xx.xx:x:...xxx:.x....:...xx..x:xx..:.-----------------.:x.....:.x::x:.:x.:x.:.x..:x:.x.xxx:x....:.:...:.:x.x:.::.xx:.:.---..:x.x..x:.x...:x:.x.-----......:...x.x:.:..-----------x..:....---:....---------..:..:.:x:...:----......x...xx.x.x------------------.......-----:x.x......----------....x.xx...:..:::::x...-......-----------------------.....x...xx.xx..---.:....xx:...----..:.......:.xx:.-----..x:..x.x....-----------------------------------------------------------------------------------------------------------..:..x....----------------------------------..x:..x..x:....xx.x.-----.x....::::..:x.x.:.:.:-------.x.x:.::..:..::xx:.....:....:.------...:x...:-------.........:xx:x:..:.----------..:...x:.:--...x..:..xxx.::..::x:....x.....:-----.x:.:.....x.-----..:.:.::.....-:..:...-------..xx.:.::..:...-..x..:..-------.:..::x....--.:.::...x.....-----------:.:..x....:..x...:---.x....----..:.:.--..xx....:.:.xx..x.xx...:xx:::.:..::x:...x:x.x:.:.:.:..x...:....:.:::.x.--------..................:.x...................:......::..:.......................x.........::...xx.:....x.:x.......:.......x:x.....x.x...x..x....:::x:.::..:........x.....x.x...::.x..:x...x.:...x:--.:.:x:x.:x...:..::...x.-..:.x.....:.:.::....:.-..xx.--..........x..xx...:::......x...:... 5M2I49M2I36M7D10M1D50M1D20M3I160M1D20M1I9M1I129M5I13M20D21M5I12M4I31M6I10M9I29M22D45M17I65M3I21M5I18M11I8M3I5M9I14M4I16M18I7M5I10M10I23M1D6M23I16M3I12M4D16M5I13M107I10M34I20M5I22M7I30M6D9M7I19M10I10M2D32M5D12M5I13M1I7M7I15M1I8M7D11M2D14M11I18M3D6M4D6M2D71M8I189M2D23M1I22M1D5M2I35M 985/1506 65.4% 1866/94230402 0.0% 451/1506 29.9% 35133217 NA +31331 chr4 + 190214555 95536509 95536508 95538464 1956 TAATTGTCCTATTTCAGTCAGTCTGGCATCATCTTGTTATTTTCAACATAATTCAGTTTCATAATACT---AGTTCATAGATGTGTGTAAATTTA----TTGTGTGGCCAAATACAATGACATTCTTTATTCATTTCACAATAGAATTAAGTTTTATGCAATACAAAAGG-AAAAACATATGGAAAATAGTCACTTTTAATAGATATTTGAGTCTGAAAAAAATAAAATGGGTTTAGAATTAAAAATCAAAGCCCATGGCTTGAACTGAGGCATATTTCCTTCTGTTATTAATGTTTGAGTTATATG--CTAAAGACGAGATTATTCAT-CAAGTCCCTCATGCAATATGTTAGTAAATGGGATTTTGGTTAGTAATTTAATTGCTTAAACCCTGACCATGTAAGCTCCCAAATCACTCAAAATAAGCTTTTACAATGGCCTGAACTGAATTAAAACAGTTAACAACAC-------------CAAAGAGTA-------------CCTCTTGATTTTATTAAGAAATGCATGTATGAAAATCTATTAACATAGGGGGAAATCTCTGCC----------ACCCCACTACGGTTAAGAGTAAGCTTTTCCTTTTCCTTTCT-----------------------TTGCTTTCTCT-----------TTTTCCAACAAATGATGGGTTATGTGAGAGTTTTTTTTTAAAACCCATATA-------AGGAAATATGGACTTAATTTTAAAATATAAATAAATAAAAGAT--GTGATGCCTCTGGTTAGAATATTGAATAAATAATTCTGACTACTAGAA-AGTATAATGAGAATTCAAGTGACCGTTGTGAAAATGCTCACAAAGCTTATCCACAAGCTAT-----TGGGGTCATATGCTTAAGCAGGGCTCCACTGTTGTTACTTGTACAGAGCTTCACTAATGGTCTGATAATAGGGGAGGGGAAGGTCGGCGTGGAGGTTCTCGTAATACTTTATAGTGGTGTAAGCACGACAGCCACTGATTAATTACTGCCCTGTTCTCAACAC--ACATTAGATTACTAAGCAATC--TCGTTTGTCTCCACAATGGCTTCATAGTTGCAGAACACTGTCCTAGAGAATATGTTAGGACGACTTACTAATGAACTTTGGATACTAGTGTAAATTTGCGGTAAAACTTCTTGCCTTTCAGATGATTGAAATGAAGATTAGAAAATATTCAAAAGATGAAAAAATGTATATATAAGCAACTCTTTTGGGGGAGATAATATGGGTGTGTCAAACTTCAATTTCATTTCAGACAGCAATAATGCATCATACTACTTTCAAAAGGAT------TATTATAGTGATCACCTTAAAAATATTAGGACACATTCCTGTTTTTACTTGCTCTCTTTTCTAATTTCGTTACTCTCTCTCCCATTTACACACATAAC-AGTGTTTGGGGTGGGGGG------AGCGTCGTATA-------GTTTCAA----AATACACTGAAAAACCAGACA------CTCAGCTAAAAGTAAAAAAAATCACTTCACTTTAAATAA---------ATTTCTCAAAGTAGCTCATGTTAATATGTGCTTCTATGGAAACAACTCTTTCTGAATGTCA--------------------------------------------GCTTA--------------AGCTTCTCCATATGATTTTTCTCAAAGGCTCCCTTTAA-----AAACC-----ATCACTACTATTTATTA----------TCTTCTTGTTA-TATAGACTGTT----ACTTTTGTTTCATCACAAATCTCTGCCTG-TTTATTAGCAGCCCTGC----CACTACTATCAGATGACATTTGTTTTACTTAATGTATGTAGTTTTAGGGAAAAAAATTATAGAACTGCTATTACTGCATTATATGAAAAAATTCCAATGTACATTTAGCTGACACTGCATCAGCTGCTATTGAAACTGGGCTTAGCTAATGGACTTTTAATGTCAGCGGGGTTATGTGCAGTTACTGGCTATTAGCAGAAATGGCTCCTTTCTATAAAAATCACTTTTCCTCAAGTGTGTTGTTTGAACATTCCTTTCCCTAATTTAGTGACTGTCACTGAATGCAAAACAAACTCAAGGACTCTGGAGTCCGCTGTTATCTTTAAGACCCTCTT chr4 + 94230402 60402091 60402090 60404112 60402091 60402090 60404112 2022 TAATTGTCCCATGTCAGTGTGAACAGCATCACTTCATCAGCTCCAGATTAATTCATTTACATAATTCTCCCAGCACGTGAAAATGTATATATTTACTTTTTTTATAATCAAATACAATAA------TGATTTTTTCAATAACGGGAGAAA---TAGTGCAAGAGATGAGGCAAAAACATGTGGAAAA-AGTCACTTTTGCCCTATGTTTTATCCTTTAAATCCCAAAGTGGATTCAGTATTAAAA-TCAAAGCACTCTAAGTATATTGTGAAATATTTACAGCTGTTATTACTGCCTGATTTATGTGTGCCAGAGACCAGATTATTCAGACTGGTTTCACAAGCAATATGTTAGTAAACAGGATTTTGTTTGGTAATTGTATT-----AAACATGTCCATTGGAATT----AATTAC---AAATGGTATTTTAC-------TGTACTTGATAAAAGCACTAAGCAGCAAGAACTAATGATGGCAAAAAATAAAAAAAAAAGTCTCCTCTCATTTTCAGTAAAGCTTTC-CATGTGAAAATCTGTCAACAT---GAAAAGTTACTGCTTGTAATTAAAGCCAGGCTTTAGTTCAGTAATATGTTTACATGTTATGTTCCAGAAGGGAAAAAATGCAATTGAATTACTCTCTTTAAAGCCTGCGGTTCACAAACACATGGTCTGCTCTGAGCACGCTACTAATGTCGACTCCTGCAGCCTGGGAAGaaaaataa---taataataataaataaaataaaaaaaaatCAGCCAAGCCTCACACCAGATT--TGAGT------TTTGCACTACTAACATCGTTTGTTACAAGTTTAAGGGAGCCCTCCAGATGTGCTTGCAGGATTTTTGCTGGGGGTATGCCTACCAGATCAGGTATTTAAGCTCTGTTCT--TGTCAGTACTTGTACAAAGTTTCACTAATGGACTGATAACAGCAAAGAGGA-----GGTGGAGAAGTC--------------------TGTGAGAATGACAGCAAGGAGCTAATTACCCCTCTGCT-TCAGCTCTCGCATTAGCTTACTAAACATCCCTTAGACGGCCTCTACAAGGGCTTTATAGG-ACAGTATCTGTTTTCAGAGATGACTTCAAGACAACTT---------CTCAGAAT-------TAAACTGG-----------------GTTCAAATTGCCAAACTGGGTGCTAAGTGGTGCTCCA--GGAGAGGACCCCAGTCTGCTGGCTGCTTTT-----GAAGATGA---------GCCCATTTCCACTCT---TTCA-ACATTTGTAATGCTTCCT--TTCTTTTTAATGAACGTGCCATTTTCTCACCATCCCTCTGTATCCTTT--------TTCCTATATGTACGTAGTATGAGTAAGAAGCTATTTGCT---------GTGGAAGCAGTTAACTAGAATTTAGGGCCGAAGGCATACAAACACTGTATATTGACAAGTTTAAATGCTATCACATTACATAATGAGACATATTTCCTAAACAGACAGCAAACAACCTTCTTTTCCCCCCTATGGCAACCCAGTGCTCCACATGACAAAGCATGTTACTA---ACTTCAGTAGAAAATGTTCCTGAGCAAGGTCATAACATATTTCATGGTAAAGAACCAAACAGATAAGCAGCTCTGTGCTTATGCAGTGTTACAGAAGCCTGTACAC-TGAATTTGCT---AATTTATCTTTAATTCACAAACCTGACACTCACTGCTTCTCTTTTAACCATTGTTTTTTCCTGTTAGCACAGCCAGATGGGAACTTTAGTATGATTACAACCCTC--CCTACTTTAATATGAACTCTTCATCTTACTACTACCAGATGACATTTGCTTTCCTTAATGTACATACTTTTA-----AAAAATTACAGAAGTGCTATTGCTGCATTACATGAAAAA-TTCCAACGTACATTTAGCTGACATAGCATCAGCTGCTGTTTAAACTGGGCTTAGCTAATGGACTTTTAATGTCAGTGGGGTTATGTGCAGTTACTGGCTATTAGCTGGAACGGGCCCTTTCTATAAAAATCACTTTTCCTCAAGCACGTTGTTTGAACATTCCTTCCTCTGATTTAGTGACTGTCACCAAATACAAAACAAATGCAAGGACGCTGGAATCTACTGTTATCTTAAAAACCAACTT .........:..x.....xx.xx::......::.::.:.x:.:..:xx.......x..x......x..---..:x.:.::.x:...:..x.....----..x.:.:::..........:.------.x...:x..:x.:..::.:.xx..---.x:.....x.x.x:...-........:.......-..........:x:xx..:...x.x:..xx...xxx:...:...:..:..x.......-.......x.x:x:xx.:x.:..x.:x......x.xx.........x..::...x....:..--.:.:....x..........x-.x:..::.x..x................::........x..:......xx...-----..x.x..x....xx:.::.----...:..---....::xx......-------..x...x:..x...:..x.x.:..:..x-------------....:.:..-------------.....::x...:.x...::xx.x.-::.:.........:.:.....---.::..:.:x....:----------:..xx:..x::...x..x:xx.xx...x.x.x..x:x...:-----------------------..:..:...:.-----------..:x.x....x...:.xx.:.x..x.x:x.:.x:.xx.xxx:..:.x.::.-------.:....x..::---....xx...x.x.....xx..x....:..--.:x.x.....xx:::...x.--...:.------..:xx.......:x.-x..x.:x.:x:.:..:...x..x.x:.x:::.x:....::..::::..x.x.xx::.x...-----:x:.:...x:.::......xxx.:..:--...::x..........:..:...........x.......:..x::..:...-----..:.x:..:..:--------------------...:..x.:......x.xx:::.......:x.:...:.-...:.x.--:......x.......:..x:.--.x.x:x.:...:....x.....:....x-:...x.:x:xx.:::.....xx.:x.:.:...:....---------..:x.:..-------....:.x.-----------------x....:..x::::..x..::x::..::x::.::..x.--.:x..::.xx:xx:.x.::x:..x:..:..-----.:....:.---------.:.x.x:.:..x.:.---....-...x:x:......x..x.--.x....:x..x.:.:------.x..x.x::x...x.::.:x.xx:x..--------.....:.x.x...x.:x.x.xxx.xxx..x:.xx..:..---------:.xx.x:..xx....-..x:...:...:x.::..------.:.:::.....-------....x..----.x:...:.:x.x..:x.....------..x.:.x:.x..:...x..xx.:x:..:x.:::xx..::---------::.:.x..x:::.:xx.......x..---:....x:.:....xx::..:.xxxx..x....--------------------------------------------.....--------------...:.x.x..:-...x...x..---.:x:.x:......-----.....-----x.....:..x:.:x..x----------.:...:.....-:.:..x.x.x.----.....x..x.x..:....x:...--...:-....x..xx.:.:..x.----:.......:.............:...x.........::..x.....-----........:....x.......:........:........-......:................:x............:..x..................................:.............................x.:..:..x:.............................:::..................:.:..:................::...:.........:x.......x.....:..::..........x..:...xx... 68M3I24M4I21M6D24M3D17M1I16M1D57M1D61M2I20M1I53M5D19M4D6M3D14M7D28M13I9M13I24M1D21M3D14M10I41M23I11M11I51M7I11M3D29M2I20M2D5M6D15M1I61M5I27M2D51M5D12M20D38M1D7M2I21M2I28M1D37M9D8M7D8M17D37M2D30M5D8M9D15M3D4M1D18M2D15M6I27M8D39M9D15M1I18M6I11M7I7M4I21M6I39M9I26M3D32M44I5M14I11M1D10M3D13M5I5M5I17M10I11M1I11M4I23M2D4M1I17M4I46M5D39M1D244M 1203/1795 67.0% 2022/94230402 0.0% 388/1795 21.6% 35134418 NA +8319 chr4 + 190214555 95540274 95540273 95540681 408 TCAGAGGGCCTGTTGAATAATATTATGATGAAATACTGATCTAGGGTCTCT---------------ATTCCGGATAGCACA---AATAAATCATTTGAA-CATGTCGGTTTTTCCTCAGCTTCTGAGAGCAGTTA---CTCAAATGGGCTTCTGTTTTCCACCACCCTGCATGCTCTGTGGGTGATGGCTGTGGGAGGCAGGGCGGGGAATGTCTGAGCCTCCTTCAATCCTTGAATTTGATCCCTAACACATTTTTAAGCTTTAT-TCTTTCATCATCTTACAGAGGAGATCCAGAAGGAAAAAGGAAAGTTGCTAAATAAAATGACAGGCACCATAATCAATGTTTCATTTAGAATGACTTCAAGATTGCTGCTTGCTAAACTTGAGCACTTCCACTGGGCGGCTA-CAATGTGTATATTTGCCAAACAC chr4 + 94230402 60409155 60409154 60409569 60409155 60409154 60409569 415 TCAGATCACCTCTTGGATAATGTTATGATGGAGCACT---CTAGGGGCACTGACTCCCAAGACCAGACTCTGCTGAGCACACACAATAAATCACCTAAAACA---CCACTATCCTTCAGCCCTTGGAAGTGGTCAGAGCTGAACTGTGCCTCTGTACAGCATTATTCTACA-GCTCTGCAGACGACGGTCATAGTTAACTGGAAAGCCACCACTTG----CCTCTTATTCCTTACATTGCATCCTAAAC------TTATGCTTTAAAGCTCACACTGCTTTATATCTCTGAGCCTAATGTCAAAGCAGAACTAGCTAATGAAAACGACAGGCGATGTAATTACTGCTGTATTGGCACTGGTGCCAAGATTACTGCCTGCTAAACTTGAATACCTCCACTGGGTGGCCAGCAACACGCACACTTCACAAACAC .....xx:...x...:.....:........:.::...---......x.x..---------------.:..:.xxx......---.........::.:..-..---.x::.x.:.:.....:::..::..::..:.---..x..x..x..:.....x:xx..::.::..:..-......::.::..:..:::.:.xx::.x..:x:.xx.x::::..----:.::.:.x.....:x...xx....:x...------...x......x-x..:x..:::::...:.xxxxx..x..x:.x.xx...:x::..x.x.....xx....:.......:x::....:.x..:.x:...x:x.x..::x:.......:....:............::..:.........:...:.-...:::.:.:.:..xx....... 37M3D11M15I15M3I15M1I2M3D30M3I33M1D44M4D29M6D11M1I141M1I23M 247/391 63.2% 415/94230402 0.0% 41/391 10.5% 35131119 NA +6923 chr4 + 190214555 95548728 95548727 95548857 130 CCTTACCTTGGGCGGCGGAGCCAGTGCCGCTGGCGCTGAGCAGGGCCAGGGCAGGTAGCACGAGCATTTGCAGCAAGTATCCCAGTCCCAGTCCGCAGCGGGCCGCTGTCGCCCGCAGACCTTTCCTCAT chr4 + 94230402 60414473 60414472 60414602 60414473 60414472 60414602 130 CCTCACCTTGCGCGGCGGAGCCGGGCCGGCTGGCCCCCAGGACGGCCAGTGCCGGGAGCACCACGCTGTGCAGCAGGTATCCCATTCCCAGCCCGCAGCGGGCCGCCGTGCCCTCCAGCCCCTTCCCCAT ...:......x...........:.xx.x......x.:x..x.x......x..x..x.....x.xxx.x.......:........x......:..............:..xx..:x...x..:....:... 130M 100/130 76.9% 130/94230402 0.0% 0/130 0.0% 35134255 NA +3060 chr4 + 190214555 95608237 95608236 95608308 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx::x.......:.:..x:xx:.x:..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 19575031 NA +14068 chr4 + 190214555 95631059 95631058 95631535 477 TGGTCAACAAATGGTTTCAT-TCAAGCTGACATTTTCAACAAGTTTCATTTGAACTAAAACTTTATGAGGAATTCACAAAATATCCTCAAAATGCTCTAGCAGTTTGCATGGTGTAAATATTTAAAGCAAATATATTCAAATAGATAAACACCGACTGTCTCATCTTTCTCGTAGATAAATCCAAATGCATCAGT-GGGGCAGTGAAAAGTCAGCTATCTTTGTTCAGATGTTGTTTAGCATATCCCCAGATGCAGTGAAAAATATTTTGGGGGTGTTCTTGCCTTTCTGCTAATCCTTTTTTTCATTGTATAATGTTTCAAAA---CATAGAGACATAATCC-------------TGCTGATGGAAAATGTGTCCAATTAAAATATCATGCATATAAATGTGTTTTGCTCACAAACAAAATTTTTAAATATGTAAAAAATCTGAAATATCA---------ATTACTATTTTTTTGTTT--------------ATACTTTATTTCAATTAAATAATAT chr4 + 94230402 60433477 60433476 60433972 60433477 60433476 60433972 496 TGGTCAAGGAATCTTTTTGTGTTCTGCCAAAGGATTTGTTAAAATACATCCAAGTAAAAAGTTCATGATAAATTCACAAAGCCTCCTATAAATGCCTAAGGAGTTTGCACCCTATAAATATTTAAAACAAATATTTCCCAATAAATAAACAC------TCTCA--TTTCCTGCTGATAAACCCAGACATATCAGCAGGGGTAAATGGAAGGCAGTTATCTTTGCTCAGATGCTGTTTAGCATATCCTTAGATGCAATGAAA---CTTTTTGCATTAATTCTTCCTTTC-ACTTATCC-TTTTATCATCATATAGAGTTTCAAAAATGCA-GGAGATGTAATCCAGCTCCTAATCTTAGCTAATGCGAGCTGTGTCTAATTAAAATCTCATCAGTGCAAAAATGTTTT-TTCACAGCAAAAG----TAAA---GAAAAAAATTTAAAACACCATCCTGCAGTTTTGCTACTTTTATTTCTTGTGCAATTAGAAAGTACTTTATCTCAATTAAACATCAT .......x:...xx...::.-.:xx..::.x:xx..::x:..:x.x...:::.::x....x..:....x:..........::x....xx......::x..x........:xx.:............:.......x.:.x....:........------.....--....::.:x......:...:.:::.....:-....:.:xx::...x...:........:.......:..............::.......:.....---x....x.x:x.:x.::.x......-:..x....-....x....::....:x.........---..-:....::......-------------x...:...x:.:x......:.........x....xx:.::...x:......-:.....:xx...:----....---.x.......:.:...:.:..---------x..:...:....x.x.:.--------------:........:.........:.x:.. 20M1I131M6D5M2D30M1I65M3D24M1D8M1D26M3I2M1D13M13I51M1D13M4D4M3D20M9I18M14I25M 326/455 71.6% 496/94230402 0.0% 63/455 13.8% 35197582 NA +3042 chr4 + 190214555 95635704 95635703 95635748 45 CCCTGTCTCACAAAAAAAAAAAAAAAAAGGAAAAAGAAAAATTGG chr4 + 94230402 68015452 68015451 68015496 68015452 68015451 68015496 45 CTCTCTCTCACAAAAAAACAAAAAAAAAGAAAGAACAGAAATTGG .:..x.............x..........:..:..x.:....... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 27620252 NA +3508 chr4 + 190214555 95636232 95636231 95636302 71 GAGCCTCCTTAATTGACACTAA-TGACCGGGAGATCCATTGCAAATTACTAAATTTTGCAGATTAGCAAACA chr4 + 94230402 605707 605706 605778 605707 605706 605778 72 GAGCTTCACTAATTTGCACAAAATGACTGGGAGACCCATTGCAAGTTAATGAAATCCACGGCTTAGCAAGCA ....:..x:.....x:...x..-....:......:.........:...x.:..x.:::.:.x.......:.. 22M1I49M 53/71 74.6% 72/94230402 0.0% 1/71 1.4% 95030525 NA +3632 chr4 + 190214555 95646313 95646312 95646396 84 CATGGTGGCATGCGCCTGTAAATCCCAGCTACTTGGAAGGCTGAGGCAGGTGAATCACTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAG-TTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:-.:...........:.........x.xx.....x..........:..:..x:xx:..:..:.. 8M2D11M1D62M 61/81 75.3% 81/94230402 0.0% 3/81 3.7% 19613116 NA +17853 chr4 + 190214555 95648722 95648721 95649746 1025 TGTGAATTAAAAAAAAATCTGAAAACTCCACTGATTAAAATGTTAAATT-----------------TAAAATG---TTAAAT-CTTTAAATTAAAAGGTTAAATCTCTGTAAA------TATAATTTTCTATGAACAAAAATAAGTGTTAATATTAATTC---TACAGTTATTATTGCTAAAACCTCAAGGCTTCCCAGGCAGAATGAAAGAGTATTATTTTACAAAATGAATCTATTTTCTTGTGC-TATATAAAGGTTTTAATT--TTGATGACAATGAAAGGCATCTCTAGTACCTAGCTAATAGCTATTTACATATGAGATTAGAGTTGGCCTTTAAAATTATTTTTAGATAGAGTAAA--ATAAACTTTGCCTCATTTTCTGGTGAAATGGGCTTAATCAACTACATCAGTCAATTTCCTACTATAAAAGAGGTAATATGAAAAGAACACAATATATGTACTCTATATATTTG-----TTTTGCAACTCAGTCATATAATGCAACCAA-AGAGACC----CACTATCTAGTATAAGTAAAGCAATGTTATTTTTATCCCACAC----TTTTCACATTTTTCAGTATGTTTAAAT-----TAAGAGCCATGTTTAGGATTGCATGAAAAGTCACAGT-CCTTCCATTAAATTCGTATACCTAGTACATTTCCAAAATGATAAGCCTGATATAAATAAAACCAGGAAAATTGGTTTTGATGCATTTTAGCTTCTGCATCAAAAAATATTGAAATAAGCATTAAAAGCAAATAGTTGTC--TTTCAAAGCTG--TAGTAGATTTTCCCCCTCATAGAATCCATCAGCTTTTGAAGAGGAACAAGTCATTCATTTGAAAACAGAGGTCATATTAGAAAAAAAGCAATA-CATGCATGACTAACAAAATCTTCTCACTCCGGAGCAAAATTTTATTTAAATTTCAAATCAGTAGTGAACCCTATC-CAAACACTTTTTGAACAAGAAGGA---TGAA--CTGTATTTCTATGGAGATAGAAATACAAGATAGAAAGATAAGATATGATAGATCTTA---TCTTTCCTATGCCCTTGCTTACCACTGAAAGCACA chr4 + 94230402 60450236 60450235 60451290 60450236 60450235 60451290 1055 TGTGAATTACTTGAACTTTTAAAAGCTCTGCTTAATAAATTTTTTAACTAAATGTACATATATAATTGAAATGAACTGAAATGCTGTTAATAAGAATGATAGA-CTCTGATACCAGATTTATAAGTTTCTCAGAATGGAAATAAA----ACTATTTGTTTGTGTTCACATATGCTTGTGAATATTCC-----TTCGAAAAGAGAATGAGTTTTTCTTATATTATTGGATGACTTCACCTTGCAGTGAATCCTTAAATGCTTCATGTCATTGGGGA-AATGAGCAGTACCCGTA--------TTCAGAAATATCTGCTAGAAAGATCAGATTTTGCATTTTTTCCTATTCCAGGACAAGACAGAGAATAAACTGCACCATCCTCTATGCTAAAATTGGGCTAATCAAAGACATCAATCAACATCATCCCAGGGAAGAAATGTTGTGAAAAAA---TATTATA-GCACACTGAGTTCTTGGTTGATTTTAGTATTCAACCATGCACCACTGGCACCAGGGACTAGAATATCATACAGTATATGCTAAAGGATGTT----CCACTCCAAGCAACGTTTTCAAATGACG-AGCACATTAAAATGGAAGTGAGAGCTCTGCTTAGGACAGGTTGAACTGTATCACTGCTTTCCAGTGAATTCCCACAACTTGCACCATACTGAAGAAGTGAGGCAGAC-TGACAGAAGGCAAGGAAATTGGTTCTGATATGTTTTTGCTTCCACATCAGAAAATACTGAAATAAGCAGTCACGATAAATAGTTACCTTTTTCAAAGCTGCCCAGCATTATTCCTTCTTTGCCGACTCTATCAATCTGAGAATGGGAGTGAGACATCATTTTGCTAGCAGAGGTCATACTGGAAAGAA--CGATGCCATGCATGACTAATAAAGTCCTTTGATTCATGAGGAAATTTTGATTTAAATTTCAAATCAATAGTCATCTCTACCAAAAACAAGTTTTGAGCAATGAAGAAGGTGAACTCTGCATTTCCATGGAGATAG-----CTTG--TGAAGCATAACATATGATGGGTCTAATCTTCTTTCATATGTCATTTCTTACCATT-AAAGTACA .........xxx:..xx.:.:...:...::..x.x....x.x..x..:.-----------------.:.....---.x....-..x.x...x.:..x.x..:.-.....xx.x------.....x.....xx...:::......:----.x....x:..:---.x..xx...xx...:x..x.:::.-----...xx.::x.......:xxxx.x....x...:x::....x.::.::..x:x...x-.x:x....x.:..:.xx.--...:x..-.....:x:.:.:.:x..--------:.x.x.:x...:.:.xx:x:....:...x..x..x...xxxx:....::x:..:.::::.:.--.......x::..x:x:.:.x..x.:....x..x:.......xx......:....:x..x.x.:.x::....::.:x.:......:.---:.x....-.:..x..:x:.x:...-----....:xx.:...::...::.x::.x:x..x-..:...:----:.::..x:......x.:x..:x:.....----::.::...x:.----......x..xx:x-..:.::..x....-----.:.....:x..:......:x.xx....xx..xx..x.-.:.....x.:.....x:.:.x..x.:..xx.x.::..:x::.:..x.x..:-.:.xx:..:x..:.:.........:....:::....x.....::.....:......:...........x.x.x:::........::.--...........--:..:.xxx..:.::.:.:::x..x..:....:::.xx...x:...:::..x...:xx....xx.:...........:.:....:..--.:..:-.............:...:..:.:.x.:..xx...x...x...x.................:....x.x.:...:.-x.....xx......:...x:.:..---....--...:.....:..........-----.xx.--x...:x....x.......:.:...x.---......x....:.x..x.......:.-....:... 49M17I7M3I6M1I20M1D9M6I26M4D11M3I24M5D55M1I18M2I7M1D17M8D62M2I86M3D7M1D16M5I30M1I7M4I28M4D11M4I13M1D13M5I37M1I51M1D87M2I11M2I86M2D5M1I75M1I24M3I4M2I20M5D4M2D26M3I26M1D8M 642/986 65.1% 1055/94230402 0.0% 108/986 11.0% 35198486 NA +3051 chr4 + 190214555 95652524 95652523 95652595 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx:.x........::..x.xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 19619318 NA +3241 chr4 + 190214555 95652654 95652653 95652701 48 AAAAAAAAAAAAAGTATATATATATACACACACACACATATATATATA chr4 + 94230402 67195530 67195529 67195577 67195530 67195529 67195577 48 AGAAGGAAAAGAAAGGTATATACACACACACACACACATATATATATA .:..::....:..:x:......:.:....................... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 28457124 NA +3264 chr4 + 190214555 95652654 95652653 95652699 46 AAAAAAAAAAAAAGTATATATATATACACACACACACATATATATA chr4 + 94230402 67195532 67195531 67195577 67195532 67195531 67195577 46 AAGGAAAAGAAAGGTATATACACACACACACACACATATATATATA ..::....:...:.......:.:.:...........:......... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 28457122 NA +3027 chr4 + 190214555 95652656 95652655 95652703 48 AAAAAAAAAAAGTATATATATATACACACACACACATATATATATATA chr4 + 94230402 67195530 67195529 67195577 67195530 67195529 67195577 48 AGAAGGAAAAGAAAGGTATATACACACACACACACACATATATATATA .:..::....::x.x:......:.............:........... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 28457126 NA +22980 chr4 + 190214555 95696711 95696710 95697383 673 CTTAATTGCAGGGGCATTAATGGGAACCTCTATAATACTGGGAA---ACTGCCCACTGAATAATGCCTCTCCAGAGAGACTTGCTGACTACACACACACCTGGCTCCGTAAATGAAAGCAGAGCCCGTGCCTCATTTCATCCCTTCAGCCTTGAAACTGCTTAGAGTCCTCACTCTGCTCATTTTGATATATCT--CTCATGAGTGACAAGTATATCCACGAGATAATAAAATGTGTTAAGATA----GTCAGCTTGGCAGTGTTTTTGCTGATGTATTAATTCATTTCTTTTCACGTGCTATATCACCACAATGTCTCACCAGATTTTATGAGAGGGTTCACTGAAGTGAAAATCAAGCCAATGAATCGTTTAATATGAACTAATGAAAACCAGATATAAAAGGCTTTAGTAACTGTTTTGGAGCTTTAATTGTCAAATGGGTGTAAATTCTGAGCACTTCTAAGTAAGAGAAAGG-ACTGTAATTATGAAATTGGGATTACTCTGTGATAATTGG-TTTGATTAAATAGTCATGTAAACAATGATGTCCTGAATGAAAACACTGAACTAGGAAGGAGGAAATGGTTTCTCCAAGGTAGGAGATGCACTTTAGACAAA--------------AGGGTACCATTATGTATATTTTCTTTGCCATGGTTTGAGAGAAATCATTG--GTAGCATGTTATAAC chr4 + 94230402 60466870 60466869 60467539 60466870 60466869 60467539 670 CTTAATTGCAC---TTTTACTGGGCACTCTTATAACACAAAGAAGAGAGTGTGTAGAAGGTAATTCCCTTCAGCAGAGACTTGCTGATTACAC------CTGCTTCAGCAAATGAATCTAGAATACA-ATGTCAACACATCCCTTT-GACTTAATGCTGCTT-----TCCTGCTCTCTTGGTCTCAGTACATCTTGCACATGACTGACAAGTATATCAGCAAAATAACAAAATGTGAGAAAAAAAAATGTCTTCTAGTTACTGTTTCTGCTGGTGTACTAATTCATTTCACATCCTATGTGGTATCACCATTATGCCTAAGGAGATTTTATGAGAAGGCTTACTGAAGTGAGAATCAAGCCAATGAATCGTTTAATATGAACTAATGAAAACCAGATATAAAAGGCTTTCACAACTGGTTTGGAGCTTTAATTGTCAAGCTGATGTAAATTCAGAGCAGTCCTAAGTAAAGCAAAGGAACTGCAATGCAGAAAATGGAATCACTTTGAGATAATTGGTTTTAATTAAATAGCCATAAAAGCAGCTTTGTCCTGC---AAGATACTAAGT-------GAAATAACAGTT--TGCAAGGTAAAAGTTAGAATTGCTAAAAAATGTAAAAATGGCGAGAGCATTATCATTTGCATCTTC--TGCCTTGTACTGCAACTATTAACTGCTGTATCTTGTTATGAC ..........x---:x...x....x..:::.....:..x::...---.x..:x:.xx:::....x..::..x:x.............:.....------...x:..x.:.......xx:...::x.:-::x...x:x........:-.x...:.x:......-----:.:::....x:.x:.:.:::..:....--.x.....x.............x:.:.:....:........xx..:.x.----...xx..x.x:.x.....:.....:....:...........x:x..x::..:x:........:x...:..x.xx.............:..:.:..........:.........................................................x::.....x....................::x.:.........x.....x.:........::x.....-....:...xxx....x...:..:...:..x.........-...:.........:...:x..:..::xx.......x---..:.:...:.::-------..::x..::...--.x.......::..x.:x.x..xxx.x...--------------..:.:.::..:..x.::..:...--....x..xx:..x:.xx.x.x.:..--...x.x......:.. 11M3D30M3I46M6D28M1D18M1D15M5D27M2I48M4I229M1I39M1I36M3D12M7D12M2D29M14I23M2D25M2I15M 464/643 72.2% 670/94230402 0.0% 57/643 8.9% 35229841 NA +3400 chr4 + 190214555 95725010 95725009 95725083 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGTCGAGGCAGGGGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::...::...x.xx.x...x::...........:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 19691806 NA +4417 chr4 + 190214555 95732262 95732261 95732347 86 AAAATGGCCAGAGCTGACCTGCTCTTTATTAAACATTAATCTTTGGCTTCTTCTGAATGCATCAGTGAGTTCAAGGTCTGGATATG chr4 + 94230402 60479955 60479954 60480039 60479955 60479954 60480039 85 AAGCTGGTCGTAGTTGACCTATTTGTTATTACACACTAATCTTTAGATGCTTCTGAGTG-ACCAGTGCATTCAAGGTCTGGATCTG ..:x...:.:x..:......::.:x......x...:........:.x.x.......:..-.:.....x:..............x.. 59M1D26M 65/85 76.5% 85/94230402 0.0% 1/85 1.2% 35252307 NA +15067 chr4 + 190214555 95747215 95747214 95747606 392 GGGAAACTCAACACTTTGTAAGAAAGATCATTAACCAAATGGCTGATGTAGCACATAGCAATAGGACTGGCTAGGCACTCATGAGCTAGGGTGAAAGTTTGATAGTGGAACATGTTACACATAATTAAATATGGATCCTTCCTAATCAATAGTGAGGGCATAATTACTTTTCTCAAGGTTAGTTAGGCAGAGTTTTTGGAAGAGACAAAAGCCAGAATAAAGGGAATCAAGAAGACAAACTAAAGAGAACTGTATTTGAGAGCTGAGCGGGCTATTAGGAGTTTTGG----CACACTTGAAAAAC-CAGACTG-CAATTTTATCAGTAGTCTCATCAGGGAACTATTAGACAAGGTCAAGAAGGCCTCTGAGAATAGCTAGGTACATTTAAGCAATGC chr4 + 94230402 60485161 60485160 60485534 60485161 60485160 60485534 374 GGGAAACTCAGTGTCCTATGA---AGATCATCCCACTAATGGCAAAA--AGCAAACAGCAGTCTGACCTGACATGCACTGATGAAC--------AAGTTTGAGAGTGGAACGTGTTACACATAATTAAATATAGATCTTTACTAATCAATGGTGAGTGTATAATTATGTTTCTCAAGGTTAGTTAGGTAGAGTATTGTGAGGAGATAC-------AATAAAGAGAGTCAAGAAGACAAACAAAGGGGTATTCTGC---AGCACTGAGGAGGCTCTTAGCACTCTTAGTTGTCAGATCTGAAAGGCTCACACTGAAAATTTTGTCTGTAGCCTCATTAAGGAGCCACCAAGC-AGGTCAAGAAGGCCTCCAAGATGAGGCAAACCCACTTAAGCAGTAC ..........::::::.:.:.---.......:xxx.x......x:.x--....x.:....:.xx...:x.x:.x.....x....:.--------........x........:....................:....:..x.........:.....x.:.......:x...................:.....x..xx..:....:.x-------.......:..:..............x..:.:.x.:.x.::---..x:.....x:....x....x.x.:..:.----..x.::.....::.-..x....-x......:..x....:.....:.:...:.:.::.::.-................::...xx..x:.:::x..:.......:.:. 21M3D23M2D37M8D114M7D40M3D29M4I14M1I7M1I37M1D46M 273/368 74.2% 374/94230402 0.0% 30/368 8.2% 35262054 NA +21876 chr4 + 190214555 95801541 95801540 95802204 664 TTACTTTTG--ATCCCATTCTCTTCCA--TGTAATT--TTATTTTTCATTAAAATTGGCTTGCAAA---AAGACCATTAAGATACACTGTGTAGCTGTCAATCAGTGGGCCCAGGAAGTTCCTAAATGATAATAGTTGATTCAGCACACTAGCTTATCGGAGTGATCTGCATGGCAGAGATGTCAGTGTGTTGTTTCCAAGCGCGACTTCTACACACAAGGAGTAGCAGAGCATGTCCCTGCCTCTTTTATCTTCCTCAGAAGAGCAACCAAGTGGCATAATCAATTCTTCCA-GCCTTTGTATTTCACCTCATATTTACTTTATGCATTGCGTTGAGATTTGCCCTTATTTTACTTCTTTAAATTGTATTTGCCTTTTCTTTTTTATCTTATAAGAAAATAAAATTATCTTAGTGCAAGGTCA-----------TGGTGCATTTCATGAA---ACACTCATAATATTTTTCTTTTCTCAGTATCCAC-AAACCAGTGAAAATTTGTCCTAATTACTGAAAGATTGTCAGAC--TCTGGATAT---------------------ACACAAAATAACCTTCTCTGTACCAGGTGTTGAGGGAATTGGAGCTGTGCAGATGGCTTTGACGCAGTGACTTTACTGGTCACTGACATATATTATTGTACCTAAGAGAGATCAAGCAT--GAGCTTGACATCTT--------TCGTGTTATGAATAT chr4 + 94230402 60499372 60499371 60500080 60499372 60499371 60500080 709 TTACCTTTGCAATTTCATCCCTTTCCTATTCTAATTCTTTCTTTTTCAATAAAGCCAATACACAAATATCAAGCTGGTAGAATGTGTTCTGTAGCTGTCAATCAGTGGGCACAAAAAATACA-AAATGTAAATAGTTATATCAGCAGACTTGCTTGCTGGAGTTATCTGCATGGCAGAGATGTCAAAGTATTGTTTCCAAGCCTGATTTCTACATGCAGGGAGTAGCAGAGCATGTCTTGGCCTCTTTTATCTTCCTCAGGAGAGCAGCCAAGTGGCATAATCAATTCTTCCAGGCTTTTGTCTTTCACCTGATGTTTACTTTGCTCGCTGCCTAAGGCTTTGTTGTTCTCGTGCCCCTTGAAA-------TGCATTTACTTTCTGATGTTATGAAAAGTAAATGTAAGTTT--TGCATGGTTATACATATATATTATTGTATTATATCAACATAGAAGCAGGAGATTTCTCCTTT-TCACCAGTTACTAAAGCA--GAAAACTTTAGTTAGTCATTGAAAAATAGTCAGGCAATCAGAAAATTAGTGCTAAAAAAGGGAAAGAACAAGAAATAGCCTTCCTTGTACAAGTTAATGGAAGAACTTTAGTCATGCAGACAGTTTTGATTAACTCGTTTAGTGAATCCATGGTATATATTATTGTGCCTAACAGAGGTCAAACATTAGAGCTCCAACTCTTCTTGTAGCTCCTGGtattaatat ....:....--..::...:.::....x--.x.....--..x.......x....::::::x::....---x.::.::x..::..::::.x.....................x..::..:.x.x-.....xx.......:xx......x...x....:::.....x.....................:x..:............x:..:.......::..:..................::x....................:......:.........................-..:.....x........x..:........::x.::...x.x::.x....::x..x.:x.:.::...x...-------...x...x....:.x..x....:.:..:xx..x:.x.x:..--....x...:.-----------.:x..:...x:..x..---.x.xx..x:.x....:..:...-...x:.x::..-...x..--.....:..xxx:..:.:.:.....:..x.....:.--..x.:.x..---------------------...x:.....:.....::.....x..x.:x..:::...:.xx..:::......::.:.....:xx.x.x::..x::x::..xx..::............:.....x....:....:...--.....:x.xx....--------..x..x...x..... 9M2I16M2I7M2I28M3I53M1D170M1I70M7D41M2D10M11I16M3I22M1D11M1I6M2D35M2I9M21I119M2I14M8I15M 464/651 71.3% 709/94230402 0.0% 71/651 10.9% 35302169 NA +3033 chr4 + 190214555 95820390 95820389 95820461 72 AGAGTCCAACTCAAAACAAACAAACAAACAAACAAACACCAAAAAACACCAAAAAACACCAAAAAACAAAAA chr4 + 94230402 6677280 6677279 6677351 6677280 6677279 6677351 72 AGATGCAAAATCAGAAAAAACAAACAAACAAACAAAACCCAACAACCTACCAACAAGAACACAAAACATAAA ...xx.x..x...:..x...................xx....x..x.xx.x..x..x.x..x......x... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 89143110 NA +3260 chr4 + 190214555 95829358 95829357 95829437 80 AACTTAAAGTATAATTAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAGAAATTCTCCCTTGGTTATTTTTTATAACAAC chr4 + 94230402 73847825 73847824 73847904 73847825 73847824 73847904 80 AATGTCAAGTTTATTTAAAAGAAAAAAATAAAGAAGGAAAAAAGAAAAGGTGTTCTGGCCAGACTGTGTTTATTTGCAAC ..:x.x....x..x......:.......x...:..........:.....:x:....xx.:x.::.:.x...xx.x:.... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 21981533 NA +3241 chr4 + 190214555 95829376 95829375 95829423 48 AAAAAAAAAAAAAAAAAGGAAAAAAAAAAAGAAATTCTCCCTTGGTTA chr4 + 94230402 64572646 64572645 64572693 64572646 64572645 64572693 48 AGGAAAAAAAAAAAGGAGGAAAAAAAAAAAGTGATTCTCTCTTGACTA .::...........::...............x:......:....::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 31256730 NA +24589 chr4 + 190214555 95837398 95837397 95838512 1115 GCCATGGGAGTGACACTTTT---------AAGATAAATTCAGAAATACCCCTGTAGGATCAACCATCAGACATGAAATGTGAAATGCTGTCACACTGGCATGAATGACTGCTACTATAATCACTGGCTCTTCTTTTATAGGGGTTTTTAT--TAATTAAATGTAAAGTCTGCCATTGGCCTTATAAGAGTGCTCATCTG------------TTTTCCTTTAATTTCAAGTAGATTAAAAGTGAGATTTGGTGTTAATTAAAAACTTAGAATTTATG-GGGTTTCTAATTGCAAATAACATTTCTGTGG-TGAGTACGTAGATGACTTCTTAGTTCTGTTTGGTAATCAACATAGTATTGAACAAGGACAGGACAAAAAATAAATCATTT----GAAGAAAAGAACACCATCATTGGCTCTATTGTCCGTGAATAGC--------TTGAATCCTATCTAGCTGGGGGGCATGTAAGAGGAGAAGCTCAACAGCTCAGGATAAACATTTTACCCTGATGTCTGGAAATTTCATTCTTTCTTTGAAAAATGTAGATGGATTTGGAAGGATAGCAATAAAAGTCAAAAAGTCATTATCA-----AGATTAATCAGTTTAATTGAAATGCTTCAACATTGTTT--GATTTCAGATGTCTATTTTTAAGTTGAATTTAGGATATATAGGGTAACTGATGAC----CAAGAGGTCTATGGGAGTTTCACATTTTATTATTTATTATCTTAACTAGATCCTGTTGAGAAATTTTTTT-----TTTTAAAGGACATCTTC-------------TGTGGGAACCCGTA------GTACAGATATTTTCCAATTAGCATCTTTGTATGTTCTCTTCTGGCATGAGTCGGGTTTAGGCTTGACACACTGGGCTTTTAAGGGGAGCTCTATCTTTGCAGTCCAGGCTACGTGTGACAAGATTAAATTGGCACACTTTACTGTACAGCTCTTGTGTTCCTGGCAGCACTGGCCTGGCTGATACCTCTGAGAGAAGGCTCAGCTGTCACTCACTGACCCATTAACACTACTGTTCTATCCTGCAGTGTCATTTTTCTCATTCTTATGGAGATAATGCTCCCTGGAGATCTCCAATACCTGGAGGAATGAAAGAGAACAGCAGAGACAGGCTAACTATCAAAGAGGG-AGCAAACAACACAGCA chr4 + 94230402 60509443 60509442 60510528 60509443 60509442 60510528 1086 GTCATGGCAGTAATACATGTTGTGTTTAAAAAGCAACTGTAGGAACTACTTTGAATTA-CATCCATCAACCAT-AAATGAAAGATTATATCACAGTGACAGGAAAAGCAATTACAATAATCACTA-----TCttttattaagttttaaaaaataattaaatCTAAAATCTATCACTGGCCTTATAAAAGTGATCATCTGGTTGTTTTGTGTTTTTTTTTTAATTCTGCATAAATTAAAAATATGACTTG---TTAATTAAAAATTTC--ATTTATACTTGCATTTTATTGCAAA---CAGTTTTGTGAATGTTTACATGGATGACCTTTTAGCTCTGATATAGAATAGACATTTTATTAAACAATGACAAGCAATAAGGCCCGTTGTTCTGAGGAAGGGAAGGATACCCT-GTTGGCTGTCATGCTTTTGAGAAGCACAAGGCATTGCCCCGTACTCAAACGG------TATAGAAGGTAAAACT-----GCAGAAGAACAACGAATTAAT--------TAGAGCAATCATTTTT------------GAAGACGAGTT---------------------CCAAAACCCATTTTAATTAGCAAATAAAGCAGAGTGCTTGG--TGCTTAAGTACTATTTTTGCTTTCTGAT---------TAACTGGGTGATGGCAGTTGTACTGTGGTTTGTAACAAATCACAAAATCTA-----GTGCCTCATTTTGC-------------ATATAAAACACATTAAAATACCTTCTTCCCCGTTCTATAGGGGCCCTTAAGATGTATTACAATGGTGAAGTTTGTACAACCAGCACAATTATTTTCTAATTAGCATCTTTTAACGTTGCATTGTGGCCTGAATCAGTTTTAGCATTGTCAAAGAGTGCT---AGAAACAGCCCTATCTGCACAAGCCAGGCCACATGTGACAAAATTAAATTGGCACACTTCACTGTACAGACCTTGTGCTCCTGGCAGCAATAGCCAGCTCAATACCTCAGAGAGCAGGCTCAGCTGTCACTCACTGACCCATTAATGCCCTGGTTGCATCCTGCAGTGTCATATTCCTCATTCACACAAAGACAGTTCTCCCCAGAGATGCCAAATACCTGCAGGAATG--AGAGGACAGCAGTGACAGCAGCACTATCAAACAGGGCAGCAAACAACATAGCA .:.....x...:.:..x.x.---------..:::..x.x:..:..:xx.::..x.xx.-..x......:x...-.....x:.:..xx.:.....x..:..x...x::.x::...x.........:-----........x::.x...xx.x--.........x....:...::..:...........:....x.......------------....::.......:::x:..:.......:.:x..:...---...........:..x--......:-xx.:x.:.x........---..x..:....:-..xx...:.:......:.:....:....x.xx:x...x:....xx....:.....x....:.xx.x..:::xx:.::..:----....::...:.:...x.-:......x.xx..:::x...:x...--------...xx:.x..:::.:x:..------.:..::...x:..:..-----..xx.:..xx...:xx...x:--------.:..:xxx.....:..------------.x...:.::..---------------------.x....x:....x.x.-----.:..x..x...xx.:x...:--.....x.::.:.:...--.x....x...---------...x.x.:xxx.:.x.xx.:..xx..:::.x:.:..----..x:.::....-----..x:.x......::-------------.xx..:.x.x::..:.:.x.::..:..-----..:..x...:xx:...x-------------..xx.:.::::...------.:...:x.......:.............xx.:...x:x..x....x...:..:.x.....xx...x..x.xx.x...---.::::x...:......x::..:x......:..:........:.................:.........x:......:...........x.:...x.x:::.......x.....x..............................::.:x:x...x:...............x..:.......x:.:::...:.:.x.....::.....x:.x........x.......--....:.......x.....xxxx.........x....-...........:.... 20M9I29M1D14M1D51M5D20M2I47M12I38M3D15M2D7M1I17M3D11M1I80M4I17M1D25M8I19M6D16M5D21M8D16M12D11M21D16M5I20M2D16M2I10M9D36M4I11M5D14M13D27M5I17M13I14M6I77M3D229M2D36M1I16M 696/1013 68.7% 1086/94230402 0.0% 175/1013 17.3% 35327955 NA +11175 chr4 + 190214555 95848069 95848068 95848565 497 TTATGCACAGAAAGGAACACAATCAAATTA--------------GGAAACACTGAAGAGCGACAAAGACAGTTCATACAATACTTTCCTTTTGACAGGCCAATAAATACTCAAGCTGAATAATTTACCAAAAGAAAAAGGGCTCACTGGAACCTCATGACCTTTTGAACAATGAGCAGGAGTTCAATTATCCACAAAC--GTTCTATTAAAAGGCTGCTTTCCAGGACACAGTGTTATTTTAGCAGGCATATGTTAGAATTATTAAAGAGAGGGAAGCACTGCCTTTGTAGTTTCTGTTTC-CTGCTATAGTTT--GTTACCTTGTTTTTAAAAACTGACTGCCACATGAAGTAGCACTTTTCCCAAAAAAGGAAAAAAATGGTAGGAGGAAGCAATTATTTT-AATAATGATTCTGGCAAGTACGAACTATTAGATTTCACTGGAACACTTT-ATCTGCACGTTACTAGAATGATACTGTCACTTTAGAAAGTATATAATTTGCTTCCATTAGAGAC chr4 + 94230402 60515184 60515183 60515668 60515184 60515183 60515668 485 TCATGTATATAAATACATACAACCAAATGCAAGGGTGTGAAAGTGGAAATAAACAAGACAGTACAACAAAGTTCTCACACTGCTACTTCCATGACAGATAAAGAAATGCACAGAATGAATAATCAAT--AAAGTAAGTAGGATGAGCTGAGTCCCACTACCTTCTGGACAATGAGAAAGGAATCCATTATACCCAGACAGGCCCTACTTAG-TTCAGTTTTTTGGGCTCTTGAATCCTTCTTGTTACACCACTCAGGAATTACTAATG---------TATTGTCTTAGCAATTTACATTTCTCTATTATAGTTCAGGTTACCTTCCTTTTTGACA---AATGCTACATAAAATATTACTTTGC-------AAGAA-----------GAGGGAGCAATTATTTTTAATAATGTTTTGGGAAAGTAGAAAGTACTAGATTTCACTTGAATACTTTTAGTTGCACATTAGTGAAATGATACTCTTGCTTTAGGAAGTCTATCATTTCCTTCCATTAGAGAC .:...:.:.x...x:x.:....:.....xx--------------.....:.xxx....xx.xxx..x.x.....x:...x.:..x:::::x......::x..x....:.x..::x........:x.:--....x..:x:..x.x.x:x..::.:..:x.....:..:........x.:.::x..x.....x.x..:..--.::...:.x.:-xx.x.:...:::..x:x:x.x:.:x..:.x.:x:xxx:.:x:x:......:...x.---------:.:..:...x.:.:...x::....-..::.......:--........x:....x:.x.---.x...:....:..:..x:.....x.-------.:...-----------....:............-.......x..:x..x.....x:..x..:...........x...:.....-.x:.....:...x.::.........x.::......:....x...x....x.............. 30M14I83M2D69M2I11M1D56M9D24M1I12M2I19M3D25M7D5M11D17M1I49M1I64M 308/464 66.4% 485/94230402 0.0% 54/464 11.6% 35332885 NA +20000 chr4 + 190214555 95849822 95849821 95850344 523 TTTCCTTTGAGAATAAATTTGCTATCTCTATTCCTTAATAAGGACTTTAGTT----TTGTGTTAATCAAAGGTATTAAGGGGCAGGTGGTGACATGCTGTCAAGTTAGAGGAGCAGCAGTGCAAACATTCTATTTATTAATGTTATTCATAAAGTTTCTATTGTAAACAGCGTTAAACTACTTACTATTCACCAAAAGCGTATAAAAAGTGTATCAGAACTTCAAAA--TCAATGACATATTGC-CCCTACCCAATGCTACTCTTCAGCAAAGAGGGAAAAAGCTGCTCCTCAAACTCAGCATGCCATTTTTAAATTCACACTTAAATTTCCACTTGAGGAGGTAAGCCAAAACAAACTAGTTCTCCCTGAGATGCACCATGGGAATAAGTGTCCTCCCAACTTTAATAATTATCAGGGTGG--------AGTCTTTTTCCCACTCCCCTTTTCCTTCTGAATAGGGTTTGCTTACTAGGCCCTAGTTGTTCTCTACTCTTCTATTTGCATAATTCACAGAAGTCAACTTGCTGGCTC chr4 + 94230402 60518598 60518597 60519131 60518598 60518597 60519131 534 TTCTCATTATGACTATATTAACTTATCACATTCCTAAAAAAGAGTTTTTATTCATATTCTATCAGTGAA--GAAGTATGGAGCAGGTGGCTATGTTATGTCAGGGAAGGATAACAGCAGCGTGAACACTCCATTTATTAGCATTATTCATAGACTTTCTATTGTAAACTGCATTACAATTCTTACTATTCAGCATCAGGGTATGAAAAGTGCACTCAAGCTTCAAAAACTCAATGACAACTTGCGCTCTACCCAGAGCTTTTCTCTGGCAAATATTGAAAAAGCCACTCCTAGAACACAGCATGTCATTTTTTAATT--CAGTTATGTTTCCACTTGAAGAGGCAAGCCAAAACAAAATATTCCTTCCTCAGAAGCATCACGGGAATAAGTTCCCTCCCAGCTTCAATAATTATCAGGAAAAAAAAAAACAAATGTTTCTTGACTCCCTATTACACTGAAATTACAGCCTCCTCATTAGGACAAACTCGTATTCTGCTTCTCTGTTCACATAACTCACAGATGCAAAACTGCAGGTCC ..::.x..:x..x..x...x:..xx::x:......x..x...:::...x:..----..x.:.:.:.x..--.x.x..x..:........:x.::.xx.....:.xx..::x.:......:.::....:..:........:::.........:.x..............x..:...x.x.x...........x..xx..x....:.......:.::x:.:........--.........xx....-.:.......:x...x:...:::.....x.xx........::.....x:...x.......:.......x....--..x...x:...........:....:.............x..x.:..:...x...x...:..:..........x:.......:...:.............:x::--------.:x:x...:::x......:x..x.x:.xx:.x..x:.::.x..:.:....x.xx.x.:..x:...:..::...:..::.....:.......x.:x..x:...x..::. 52M4I13M2D156M2I15M1I72M2D103M8I108M 362/519 69.7% 534/94230402 0.0% 19/519 3.7% 35331224 NA +9353 chr4 + 190214555 95854923 95854922 95855224 302 AAATAATCTGAGTTGCAGTATTTTATTTCCAGTCATGATTTGGGATGAGAGCAGAGTAGCCTGACATTCACAA----TACTTCAGTGGCAATTACAGCACAGTTAATATATCAATTTAATTAAATTCTTATAGTGATTCATGATATAAAATATCAAAATAAGTTACCTTGCACAGAAATAGACAA-AAGATCAGTGTTGTGGGCAGAGATACAATGAATTAAATTAAAGTATAACTGTCATCTACTGAAAGGATTGTGTAC---------ATAAGTAGGGTTTTTTTTTGGTAAAGCAATCACTTAGAAAGACATC chr4 + 94230402 60525469 60525468 60525772 60525469 60525468 60525772 304 AAATATATAGAAGCACAACATCTCATTTTCATTGCTGACCTGGGGTGAGAGCACAACAGCGTGACATTTACAACAGATACTTCAACTGTAATTACCAAACAGTTAATATATCAATTTAATTAAAATCCTATAGTGATAAACTGCATAAAGTATCAAAAGAAGTTAACTCAGGCAAAAACAAACAAGGGGATCAAGGCAATCAGTTGAGGCAAAATT-----AATTACAGTATTTGTCCCACCAATTCAGAGGGCTATTTGCACCTCTGATACAAGAGA-------TCTTGCTGCAGCAATCTTTCAGAATGATATC .....xx:x..:x::..::..:.:....:..x.xx...::....:........x.::...x.......:....----.......::x.:......x:x..........................x..:.........xx.:x::.....:........x......x..::x:..:...:.:....-::.....:x.:x:.x:.:x...::.x...x-----.....x.....xxx.x:..:.x.:.x.:...::.:.x.:.---------.:...x::-------.:...x.:x.......x:.:....x..:... 73M4I108M1I30M5D40M9I8M7D31M 197/290 67.9% 304/94230402 0.0% 26/290 9.0% 35329454 NA +7975 chr4 + 190214555 95871319 95871318 95871572 254 ATTATCATTTACAATTATAATTTGCTAGATGATACAGATGAGATG-TAGTAATGAGTAATATAATTGCCTTTTTAATGCTGTAGTAGGTATGTTGTGGTCATTAATTATCAACTTGACTAATTATTATTGGTAACAATTAATCTTTCCTCTGATAATTATTGCTGATGAATATACATGTTTTGCCCCCATTA-----CCTTTTACCATGACATGAAGATGATATATGTGATTATTAAACTACAGACTGTCTAAAACAGAG chr4 + 94230402 60531417 60531416 60531669 60531417 60531416 60531669 253 ATTGGCACGCAAAATTGTAACTTGAAGGATAACACAGCTGAGGAGCTAGTCTCTGGTAAAATAATAGCCACTATAA-ACTATGGTAGGTGTATCATACCCATTAATTATCAGCTTGGCTAATTAGTATTGGTAGAGATCAATCTTTGCTTTTGTAATTACTGCTGATGGATGAACATGGTCTG-TTTTATTAAAAATTATTTCAGAATGATATAGAGGAAATCCATAACAT-----AGCTACACAGTCTCTGAAAGAGAG ...:x..:x:.x....:...:...xx:...:.:....x....:x.-....xx:x:....x.....x...x:.x...-:..:.:......:.:.::.:x:............:....:.......x........:x:..:.......x..:.x:......:........:..:x.....x.:..-::::....-----:x...:.xx....:..::..:x:..x:..:xx..-----.:.....x.x.x...:...x.... 45M1I30M1D106M1D8M5I34M5D24M 168/247 68.0% 253/94230402 0.0% 13/247 5.3% 35339902 NA +4003 chr4 + 190214555 95874020 95874019 95874124 105 ATTTATTAACATCTTACTCATGAGGATAAAACTCTTGAAATATTACAGCTCATTTTCAAGAATGTCCTTGGGATG--GAAAGCAGATATATTTTTTGTCACATTACA chr4 + 94230402 33823417 33823416 33823523 33823417 33823416 33823523 107 ACTGATTAAAATTTTGCTCACTAGGATAAAACACTTGAAATGAATCATCTCATTTTCCAGCATGTCCTCGGGTTGCTGCAGGCACAATAAATTACAGTCATATAACA .:.x.....x..:..:....:x..........x........:xxx..x.........x..x.......:...x..--.x.:...x.xxx.x..x:x....:..x... 75M2I30M 76/105 72.4% 107/94230402 0.0% 2/105 1.9% 62050603 NA +3084 chr4 + 190214555 95938314 95938313 95938366 53 TTCCATCTCAAAAAAAAAAAAAAAAGAAAAGAAATTAAAACTTATTAAAAAAT chr4 + 94230402 72184795 72184794 72184847 72184795 72184794 72184847 53 TTCCATTTAAAGAAAAAAAAAAAAAGAAGAAAAATTAGAACCAAGGAAATAAT ......:.x..:................:.:......:...:x.xx...x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 23753519 NA +8656 chr4 + 190214555 95957938 95957937 95958152 215 AGCAGGTTGGCAATTTGTCACATCAGCCCCTTCATGAACTATCAACCTCATTACCGCGGTTCACTGTACAGTTGCCCCTTGGGAATCTAATACTAATAGCATGTAGAGGGTGATGAGGCCTGTGGTCTCAACTACTTCATTATTGATTCACTTAAAAATATTCCACCTACATATTTGAATAAAATAGGTGATACAT-TAGAAGGGGAAAAACACCA chr4 + 94230402 60559152 60559151 60559365 60559152 60559151 60559365 214 AACAGGTCAGTAATTCATCACATCACCCCTTCTATGGAACATCAACCTCCTTATTGCGGTTCACTGCACATACTGCCCTTGGGAGTCCAATACTAATAGTGTGCAGACAGTGCTAAAGCACACAATCCAAACTACCTTGTTATAAACCTACTTTGAAGAA--ACACTTACATATTAGAGTGAAACAAGCATTACACATAGAAAAAACAAAAATCCA .:.....::.:....::........x...:.::...:.x:.........x...::...........:...xx:xx.........:..:...........::..:...x:...x.:.:..x:::::..:x......:.::....x:.:::....x:..:x.--x...:........x..:.:...:.:.::x....:-.....::::x....xx... 160M2D34M1I19M 143/213 67.1% 214/94230402 0.0% 3/213 1.4% 35398786 NA +3152 chr4 + 190214555 96012314 96012313 96012396 83 CATGGTGGCACACACCTGTAGTTTCAGCTACTTGGGAGGCTGAGGTGGGAGGACTACTTAAGCCTGGGAGGTTAAGGCCTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--.......:..........::........x:xx.x.:.x:....:.:..::.:..x..x:...:x:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 19979117 NA +3874 chr4 + 190214555 96012462 96012461 96012644 183 AAAAAGAGAGAGAGAGAAGAGGAAATAAA---AGAAAAGAAGGGAAGGG-------------------------AAGGGAGAAAAGAAAAAGAAAGAGAGAAAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAA-------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 65771127 65771126 65771340 65771127 65771126 65771340 214 AAAAAGGCAGAG-GAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATC---AGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ......:x....-..:x..:.x.......---.....x:xx:..x....-------------------------:...:.:......:..x:...........::x.x.:...xx---....:..::.....xx....x:.:..x::.-------..:...::...:.:x...x...:.:x.x......x..x..x:..:xx.:x...:...:..x.. 12M1D16M3I17M25I41M3D30M7I63M 120/179 67.0% 214/94230402 0.0% 39/179 21.8% 30241335 NA +3392 chr4 + 190214555 96012516 96012515 96012629 114 AAAGAAAAAGAAAGAGAGAAAGAGAAAGAAAGAAAGAGAGA--AAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148381 51148380 51148502 51148381 51148380 51148502 122 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ......:...xx.x.....:.....:.........x...::--x....xx:..:x.::.x.x::..::x..:.....:...:::.:..:..::..x..------:...x.x...:...:.:. 41M2I55M6I18M 74/114 64.9% 122/94230402 0.0% 8/114 7.0% 44864135 NA +3483 chr4 + 190214555 96012550 96012549 96012669 120 AGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG-----GGAGGGAGGGAGGGAGGGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ...:....::.:xx.x.......:...:.........x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....:::..:..x..-----x..:.x.x.:...:...... 100M5I20M 74/120 61.7% 125/94230402 0.0% 5/120 4.2% 44864171 NA +3049 chr4 + 190214555 96012562 96012561 96012636 75 AGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..:..::.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 54900384 NA +3078 chr4 + 190214555 96012570 96012569 96012647 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 54900392 NA +3127 chr4 + 190214555 96012578 96012577 96012654 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGGGAGG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:...:x..:..... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 54900400 NA +3014 chr4 + 190214555 96012582 96012581 96012658 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGGGAGGGAGG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x...:.:x:.:..... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 54900404 NA +3023 chr4 + 190214555 96012586 96012585 96012662 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGGGAGGGAGGGAGG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x..:..:x:.:..... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 54900408 NA +3641 chr4 + 190214555 96024993 96024992 96025075 83 CATGGTGGTATATTCCTGTAATCCCAGCTACTTGAGAGGCTGAGGTAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....::.--.x....:.:............:........x:xx.x.:.x::.....:.....:..:..x:..:..:.. 12M2D69M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 19991796 NA +12908 chr4 + 190214555 96039397 96039396 96040133 737 TGTCCTCTATTTCAAGGTCAGTGCATTAATGACAGCACATTACTCTGGTGAGTCAGTCCAACCCCTTA-------GCTTGCAAAATGCTCAAATTTTGCTAAAAGCAACTCTTGAATTAATTGTAACTATTTGGTCAGCTCAGATTCAAATGATTCCATCTGGATTTGCCAAATAGGACTTTGTAGAAGAAAGTGAAGCCTCTTT--TAAACACTAGGCTATGTTCCATTTTGTTTTAGAAATAGCTACA---GAATAAAGCTTTATCTTCTGTTTCCTGAATTAT-TATGGCACAACACAGGGCAATCCTTTCTGGTATTTCTCATGCTCTGTTCTTTGTCTCCTGACATTGGAAGCTTTTTTATTTAACTAGTATTT-------CCACTTCATGATCAAATTAATTTGTATCCACTCCTCAACTTGTCTTCTTTCAAAACTCCAGTTTAATTACAAACATATCTTTGTGTTA---GATAAGCAA-----CAAAGACAGCAATATAGAGAAGGTTGATGGGAATCTGTCTGCATTATTTACCAAATGCTTCAGTATTTCCAAGCAGCTGACGACAGACTAGTAGCCAATCCAAATTCATTTCCAGAGAGACACATAAAAACTTTACTGCTTAACAGAGCTCAAAATATCCACCTGTCTCTCCAACTAAAGTGCAAGCAGAGACTATACTGCTGATGCAGGAGAT-CTTCTCTAATCTTTTACATTGGGTAGAACCATCTGATGCTAATTAT---ATTATGGCTATTTG chr4 + 94230402 60578349 60578348 60579067 60578349 60578348 60579067 719 TGTCCTAGATTTCAAGGTCAGTGCATAAGTAACAACGCACAACATTGTCAAGCCAG--CAAGCATTCACAAGCCAGTTTGTGAAATTTTAAAATTTTGCTCTAAGCTCTTCCTGAATATACTGTAAAAATTGGGCAAGTCCAAGTTAAAATGATCCAATATCACTAGACCATATCAGATTATTTCCATTATAGATAATCCCATTTGCTGACCACT--GCTA-----------GAATTACAGATGACTTCATGTGAAAAGAGGACTGCCCGTGGTTTGAT-AATTATATATCTTCTAGCAATAGCACATGCATTCTTTAACTTCTC----TTTGCTGCTTTTTTCTTGC-----GAGG--TTGTTGTTTATCCAGTAGTCTAGATCACTGCTGCAT--TCAATTTGTTTTGTTTTGTCTTTTTTTTTTTAATTTCTCTGCACTTGTAGTTTAATTAGAAACAA--CTCCGTGTTAACAGATAAAGAAAAGTACAAAGACAAAGCTTTGTAGAAGATTGGCTGT--TCTGTTTACATTATTTTACAAG---------ATTTCTGAGCAAGTGATGACACATCAGCCATCAGTCGAAATCCATATCCAGAGAGACACTTAAAAATGTTAGTGCTTAACAGAGCTCAAAATACCCACCTGTCCTCCATTCTACCCTGCAATTACAGGTTG-------AATGAAAGATAGACTTTTGTAATTATTTGCATTTCA-AACACTATCTGCCGATAACTATCTCATTGTTGATATTTG ......xx..................x.:.:...:.:..:x..x:..x::..:...--...x.x:.:.-------.:...::....x:.x..........xx....xx:..:.....xx.:.....xx...x..:x..::..::..x.......:.x..x.x:x.xx:...x..x:..:.x.x.xx.xx.x..xx..x..:x...--.:.x....--....-----------.xx...x.:..::..x..---...x.:..xx:.::.:x:x....xx.-......-...xx:x:.:..xx:.xxx..x.x....xxx.:.....----.:..:.x:..x.:..:..x-----..:.--..x..:....x.:....x.:-------.::..x...--....x..:x.....x.:xx..::.:xx:..xxx..::.:::x.x:.x:..........x.....x--..::......---.....:x..-----........:x:x.x.:x.....:...::x.x--.....:.:........xx...:---------.....::....:x...:....x.::..:x::..:..x....:...x.............x......:x...x.....................:.........:::.xxx...xxx.....x:.x..::.:-------:...x.:..x.x-...:.x....:x...:....xx:-.:x..:.....x:.x...:...---...:.x.x...... 56M2D10M7I130M2I8M2D4M11D18M3I26M1D6M1I38M4D19M5D4M2D20M7I9M2D65M2D10M3I9M5I31M2D22M9D131M7D12M1I23M1D22M3I14M 452/687 65.8% 719/94230402 0.0% 82/687 11.9% 35461048 NA +40703 chr4 + 190214555 96050122 96050121 96050868 747 AAAGAAGTTCAGGCAGTAAGAAATGGGCAACCAAGGGCTAACAATATTCTTTTCTTCACTAGGTTGATACCAACTTGCTAAAGTGGC-TGCTATCAAG-AGTATTTATAGCACTGTGTAAA-----CTAGTGACTTGAGTTTTACATCCAAAAGCTTTGGTTAATATTACCATCGATGTTTAAAGCTGAGTTTAATGTCTAAAAGCTGCTCAATAAACATTTTAGTACTGCTCTTTTCCAGTGATCTGAATTCAATAATGTTACCTTTTGAGAAGCTGCAAAATGGAAAGTGAAAGAATGATTTATGAAGCCTGGCTATGCATGGCCAGATAAGAAAGCCTTAACTGATGCTTGCAAGATTCTCTTTAATGAAGTACAAGTTGCCAAGATAAGTTTAGGTAAATGAAGCTTCTGTCACATTATGTTATAGTGAAAGAAATGACAGACATAGCACAGAAGATGGAGGTTAATACAAAATGGTAGTGTCAAACAATGTAGTCTAGGTAACTGCACAAAGATGGAGCAGATGCATTAGTGTTATTACTATAAACAAGTTCATAATACTACAACACATTCATGGAATCCATTCGAATTAAGCCTAGCAGCTTTCTTTGTTTAAGTTGTCACTTAGGCTGCATGCAGATCATATTTCTGAGCCATCGACTCCTTTCAAGTAAAA-GCTCCTGTATTCAGTACCAACTTCTATTT---------AGATTGTACTGTTAACCTTAAAACCTCTAATGTTTTGCCTTTTCAA chr4 + 94230402 60586130 60586129 60586882 60586130 60586129 60586882 753 AAAAAAAAAAAGATGACAAGAAAGGAGGAAATATATGCTAATAATATTTTGTTTCTC-CTAGATTAGTAGCAGCTTGCTAAAGTGGCCTGCCATCAAACAGTATTTATAGTGATGTATAAAGCATATTAGTGACATCCCTTTTAAATTCAAAAGCTTTAGCTAATACTGCTGTCTGCATTCAAAGCAGATCTCAGTGCCTAAAAGCCGGTCAATAAACATTTTAGTACTGCTCTATTCCAGTGATCTGAATTCAATAAAGTTACCTTTCCAGAAGCTGCAAAATGGAAAGTGAAAGGATGATTTATGAAGCTTAGCTATGCATGGCCAGATAAGAAAGCTTTAACTGATGCTTGCAGGATTCTCTTTAATGAAGTACAAGTTGCCAAGATAAGTTTAGGTAAATGAAGCTTCTGTCACAATATGTTATAGCAAAAGAAATGACAGACACAGCAGAGCAGATGGAGGTTATTATCGAACAGTAGTGTCAAGAAATGTAGTCTAGGTAACTGCACAAA----GAGCAGATGCATTAGGTTTGTTATT---AACAATTTCATGATACCAACAAATATTAATAGAATCTTTTTAAATTAAATCTAGCAAGATTCTTTGTTTAAATTGTCATCTAGCCTTCTTTCAGACCATATTTCCAAGCCTTCACTTTCTTTTAAATAGAGTACTCCTCT-TTCTTTTCCACCTTCCATTTTTCCATTGCTGATGTTGTCATTAGCCTCGAAGCACTTAAGTTTCT--CTCTTCAA ...:..:xxx..:::::......x.:.x..x:.x:x.....:......:.x..::..-....:..::..x..:..............-...:.....:-...........::x...:....-----:.......x.xxx.....x..:..........:.:.....:.:.::..x:::..:.....x..x:.:.:..:........:.x.........................x.......................x.........:x..........................:..............:.:.........................:................:..............................................................x..........::................:....x..x............x..:x:..::..........:x.........................----...............xx..:...:.---.....x.....:....:.xx.x.:...x..:.....:x..::......::......:xx............:......::...x..x.x.x....:........::....x..:x:.:....:..:..:.:-:.....x.-...xx.x...x....:....---------x...xx.::::...:...::..:.x::...xx..:.--..:..... 57M1D29M1I10M1I22M5I390M4D25M3D131M1I8M1D20M9I36M2D8M 587/736 79.8% 753/94230402 0.0% 28/736 3.8% 35463992 NA +3125 chr4 + 190214555 96051761 96051760 96051825 65 TTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTTTCTTTTCTTTTGTTTCTTTCCTTT chr4 + 94230402 36924288 36924287 36924352 36924288 36924287 36924352 65 TTGCTTTCCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTTAATTT ..x.......x.....x.:.....x...:....:.:.x.:.::..:..:.:.....x...xx... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 59127473 NA +16829 chr4 + 190214555 96097183 96097182 96097725 543 GACTGAAAGAGGGGAATTCTGCACCACAATGTCTATGGAAAGTGGTAAGTCCTCTGGCGTATTTAACAACATGCTTTGTTTTGAAGATAATGAGGACATTACAAGCTGTTTGTGTCTTTTATCTAGAAATTTCTACCAGAGGCTCTTTTCAAACACCGTGGTTTTCAGTGCCTGATTCCTGTAGAATCCAAGTCTGGTTTTGCTGCAG-CATCAGCTGGTACTCATGCTTGTTGAGGCCTG-TGTGCCATTCGTGGGAACATACTTATCTTTGTGAGAAATTCACTCACTTTAGGTGCTCTTCC---------------AGGGGGCAAAACTTTAATCAGCTTTTCAACCTA-AGATTCTTCTGTTTGAAATTCTGAGCGCAGCTACGTATATTAACTTGCCTTGCCCCAACCTGAACAGGACTGAAACGAAAGTAGTAACTGGCATACTGTAATGATATGAAAGACCATATTAAATAAATACCATGAGATAGTATTGAGCCCTTTGAATTTTTCAGGAGGACAGTAATGTTCTATCAAGAAAATTATAGTTGAGTATTTT chr4 + 94230402 60606250 60606249 60606807 60606250 60606249 60606807 558 GATGAAAAGAAGAAAGGTCTGCAACATACAGACTTCAGAAACTGG-GAGTGTTTTGGCATAGTTATTAACACACTTTGTTTTGCAGATAATGAGAACATTGCAAGCTGTTTGGGTCTTTTGTCTAAAAATTCCCACCAGAGGCTCTTGTAAGCTGCCATGTCTTTCAGTGACTGATTCCCGGGGAGCCTAAGTCTGGTTTAACCATTGTTGTCAGCTGTTTCTTGTGCTTGTTGGTGCCTGTTTTGCTATCAGTGGGCACCTTGCCAAAGTTCTGAGAAATCCACTGGCTTTAAGAGTCCCTCCCCTCATTCCCTTCTTCGTGATTGCAATTTTGATCAGCTCCTCATTGAAGAGAGCTGTCATTTTGGAACTCATCATATGATGACATAGATTATTTTGCATTGCCCCATCCTGACTAGAAGTGAAATGGAACTAATGACTGGCATATGGAAGCAGAATGCATAAATGCAGAGGATGAATTTAATCGAACCTTGCT--GTCTTTTGAAATTTTCAGCAAGCCAATAATCAGCAGTAATTAAGATTTTAAATGAATGCTCT ..:x:.....:.::.:x......x..:.xx.x..x::....x...-:...x:.:....:..x...x:....::..........x..........:.....:...........x.......:....:.....:.:.............x.x.:x::..:..x:........x........:.x:..::.:...........x:.:::x.-::.......x.x..::.........:x.....-.x...:..:x.....x..x.xx::.xxx..x........:....x:.....:.x.::.:...---------------x.x.:x::x..:...:.......::...x:xx.-...x::x..xx....:..:..xxx:::::::x..:..x....x:....x........x.....x:..:.x.....:.:..x..:.:.........:x.x.::::x...x.x:.x:::.xx::..:...x:x..x::.:xx.::.--.:.:......x.......x.:.x..:....xxx.x:.x.xx..:...x..:x...:.::.:. 45M1D162M1I32M1I62M15I33M1I144M2D62M 350/540 64.8% 558/94230402 0.0% 21/540 3.9% 35490933 NA +32712 chr4 + 190214555 96102892 96102891 96104414 1523 TAAAGGTTATAGAGTAAAATCTGGGA--AAGTGTCCTAATTGTTGCCCT---AATGACTCACCATATTCAGCCTCTCCCTTCCTCCCTTCCTTAATCATGCTGCTAATGCTTATTTTATGTAAAAACCTCAACTGGAACTAACTAG-GGCATCTTTAGGGTAATGTTAATTTCTAGGCAATAGTA-------ATTTTCAATT-----AAAATTGCACAGTGTACCAGTGAATTGAAAGT--------------CAGATAGAAGGATGCTATATTATGGACTTTTTGGTTTCTCTAATTAGCCCTATATCCCGCACATTTCTCAAAATTGGCAACAAGT----ATTTGGTTGTTTTCAGTTTTACGCCACAGTGCTTATCTGGTCTCCATTCCTCTCTGTGGAGAGGAAACCAAATTCTCCCATACATTTAGGCT-----CAGCTCTCCTCAGGCTGTAGTAAGGCCTGCATAGCTCAAGATAAGAGAAGAAAACACTTCAAACAGCTAGGAATTAATCAGCCAACTTGGCTTCAAGCTCGGTGTTACAACGGAGCAATTCACTTTCAGAAGCTCACTTACATTAACTGAAATTAAATGAGACAGGCTTGTTTAATTCTTGTATGTAAAAGGCTCGTGAAGCACAG-TTTAAACCAGTTACTTTGTGATGTCATGGAGCAGAG-GGCTAATTGAGCTCATTGGAAAGGGA-------AGAGCCCATGGGTTTGTATCAAAGAGCCGTTGGGCTGGCTTTTGAAACAATTTCCTTATGTCTTATTCATACCTATACAGCATTACATTTTGTATTGTTCATTATCATTTAACCAGAATGTTCATCCCCTCCTGTTATGTCAGTATTATTTGTAATAGGAGAAGCTCCTTAGGGAATACATATGATAGTTTAATTGTTCTGTGAACCAATGTCTCTTAAGGCCTTTCTCATTGTATCTCAGAAC-ATTTCTAC-------ATGCAAGCAATAGGATTAG-TTATCACTAGTTTAA----AGTATTCTAGAAAAC-----AGATTTTTGTTATACAGATG----GATTTTAATAAAGGGCTCAAATACATAA-TAAACACAATCAGCCAACATATATCTCTGGCTGTTTCAAGTTTTCCAATCAGATATTTTATTTCACTAATAACAATATTTTGTTTATTTAGGTGTTTTATTTATATATTTATATTAGGATTAATTTTTTAATAACTTTTATTGAAAAACACATTAAATCTCAAGGATATATTTATGCAAAAT-------------TGACTAATTCTCTCCCAACGTT-TGAAAACTATGTACTGAACCAGTTTAGTAACTAAGGTTATCTATTTCCTAATTCAATGATTAGCCAATCAGAGCAATCAATGTATGCTAATGATAGGGCTAAGTGAAAAATCTCAAAAGAATTTAAACCTATGACTCTAAACTCAGAATCATCTGTTATAATGATTAAACCACTTGCTCTCTA----TCAGATACTAGC-CCATTAATTTAGTCAAAGATATCGAAAGCTTTTTGTTCTACAGGCTGTTAGTAAAGCAAATA--AAACACTTATCTGTGTTATTGACAAGTTCTTAATAGATTCGTTCATT chr4 + 94230402 60612741 60612740 60614246 60612741 60612740 60614246 1506 TAAAGGTAACTGACTCAAGTGTGGGATGACAAGTCTTAATTGGTACCCTTTCAGAGATTGACCAAAT-----CTTTTCTGGCCTTCCTTTAATAATTTTTGTGTAAAT--TTACATCATGTTAGAAGCAAAAATAGAATTAAGAAACAACATCTTCAGAGAAATATAAAGTTTTCTGCAATGGTATCTGATTATTTTTATTTGTGAGAACATTCATGAATGCATCAACACAAGAAAAGTTATAGGCAAGTAGGCAAACAGAGCAAGTCAGTGTTTTG--CGATGTGTTCCCTCTGGTT-TCCACATA---AACAAGCTTTTCTGGATTGGCAACAGGTTTTCATTTTGTTTTCTTT--TTTTATAGCATGAGGCTTATCTGGTCTCCATCCCCCTCTGTGAAGAGCAGACAAAAATCTCCCCAAGCTCTGACTTACTAGCGGGTCTCCCCAGGCTGTAGTGAGGCCTGCACAGTGCTAGATAAGAAAGGAGTATACTTCAAACAGCTCAGCATTAATCAGCCAGCATGGCTTCAAGCTCAGTGTTAGAGCAAAGGAATGCA-GTTCAGAGGCTCGCTTACGTTAAATGAAATTAAACGAGACAGACTCACTTAATTCTTGCTTTTAAAAAGCTCTTGAAATGCTGTTTTAAGCTAGTTACTTTGTGATGCCACTGAGTAAGGCAGTTAATCGGGCTCATCGGAGTGGGAAAGCAACAGACCCCATAGGATTCTTTTGGAAAATTGTTCGGCTTGCCTTCAGAAGAATTTCCTTATATCTTATTAATACCTTTTCAGCATAACATATTTTATCTATTATT----TCTAACTAGAATGCTCAGCTCCTCCTTTCATATCA---------CTCACAGAGCAATCCTTGTTAAGAATGTAGATGATGGCTTAATTTCTGTATCTTGCAATG-----TAGGGTCTTTTACTTTGCATTGAAGAACTACCTTTGTTGGTGTGATTCAAGAGA-AGTGTTAGCTTATGAC---TTTAAGGGCAGTAAACGAGCTTACACTGAAACTTTCCTTTGTACACATGGTATGATTGTATTGGGGAAGAACATTAGATAACTTAAGGAAATCAGTGAAAA----------ACTGAACAAAAATTC--------ATCTTTTATT-------------TATTCTTCTCATTTTG----TAAGTTTCTAAAATAGCACTATG--TAATATATTACCAAATTT--TTGAAAACCGAA-TAGATGTCAAGTA-ACAAGTAGTCTAAATTCTTAACAGGACCTGGCTAAGGATATACTGTAGTTATAGAAACTATT--CCAAAACAGTTCAGT-TTTAAGG--ATCTCTTTCCTAATTAAGTGATTAGCCAATCAGAGTTATCAATTTATGCTAATGATAAGGCTAATAGTGTATTCC------------------TGGTTTGGTTTTCAGAAGCATCTGTTCTAACGATTAAACAATTTGCTCTCTATATGTCTGATACTAGCACCATTAGCTAAACCGA--TTAACTGAAGATCTTTCTTCT-TAGGCAGAAAGTTAAGCATCTATTAAATAT---CCTGTG---CTGAAAAATTCTTAGTATCTTTTTTTTTT .......x.:x..x.x..:.x.....--.x:x...:......x.:....---.:x..:.x....x..-----..:.:.:xx...:....:xx....:x.xx..:x...--...:x.:....x.:..x.xx..x.:...:...xx.:-::......:..:.x...:.x..x..:.xx.....:...-------.....:.x..-----..x...xxxx.:..:.:..:::x.xx:.....--------------..:.:...:x:.xx.x:.:..x..--.xx.x..x.::....::..-x..x:...---x:..x::..:..x::..........:..----....x...x.:..:--.....::x..:::x.................:..:.......:....x.:..x...x......xx.xx.:.::x:.-----.:.x.....:...........:.........:..:x.x........:.:..:x.:.............x:.x............:.x.............:......x.:.::..x...x..-x......:....:.....:....x..........:.......:..:::..........:x.x.....:....x....:::.x.-.....:.:...............:..:x...:.::.-:.:....:.:......:...:x....-------...x.....:..x..x.x.:::.:.:::...x....x..:..:::..x...........:.......x......x.x......x....x..x...:xx.:...----.:....:......:...x.:......x.:..:...---------x.x.:..::x..x.:::x.x::....::.x.....:.:......x:.x.:.xxxx.....-----..:..:....:x.x...:..:xx.....-.::.:.::-------..x....x:.-..x:....-....x..---.....----....xx.x..xxx..-----.:x...::x..:....x...----....x..x.:::.::xxxx.x..x....-.x..x:x......:x..x.----------:...xx:x..:x..:--------..x.......-------------....:.x:.:....x.----.xx:...x..x.x.x::.:..x.--....x.x...x:..x...--.......x.:x.-..:..x.....x.-.:.xx..xx.x....-------------..:....xxx.x.x.::xx...-.::.......x--.::..x.....:...-x:.....--....x..........x.:.................:x......x.............:......xx.x:x.x..:------------------..::.:x:xx:......x........x...:........x.:..........----..x.........-......::.x.::.:.--x..x.x:...x.:...x....-:....x.xx...x.....xx..--...:.:---:.....---:...x..:......:..xx..:x..:x.. 26M2I21M3I15M5D36M2D36M1I38M7I10M5I32M14I24M2D19M1D8M3D28M4I14M2D76M5I122M1D83M1I36M1I26M7I103M4D35M9D60M5D28M1I8M7I10M1D8M1I7M3D5M4I15M5I20M4I28M1I19M10D15M8D10M13D16M4D23M2D18M2D12M1D13M1D15M13I22M1I11M2D15M1D7M2D75M18D52M4I12M1I16M2D21M1D22M2I6M3D6M3D29M 978/1412 69.3% 1506/94230402 0.0% 205/1412 14.5% 35490151 NA +3397 chr4 + 190214555 96126636 96126635 96126721 86 TCTTTCAAGAAAAAGACATGGCAGGAAAAGAAAATGGGAAAGGAGAAAGAAAAGGGAAGAAAGAGAAAAAGGAA------GAGGAAGAGTTA chr4 + 94230402 29014664 29014663 29014755 29014664 29014663 29014755 92 TCCTCCAGTAAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAACCCTTTGATTAAGAGTTA ..:.:..:x...:x..x:x:..x:x...:...:.x....:........:....::::.......:....x....------..xx........ 74M6I12M 60/86 69.8% 92/94230402 0.0% 6/86 7.0% 67111972 NA +3782 chr4 + 190214555 96128667 96128666 96128750 84 ACGTGGTGGTGTATAACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGAAGACAGAGGTTGTAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::......:.::--....:.:...........::........x.xx.x...x..........::....x:xx:..:..... 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 20095471 NA +19106 chr4 + 190214555 96131955 96131954 96132583 629 ATCTCTCATTTGTAATTTTTACTTCTAGAGGCAAA---------AAATATTTTGTCATATGTGTTGTTTCCTCCCAAGGACAA-TATAACCTCTTAGAAGAATACTCAGGCCCCCAATGTAACATTGTTTCTGCCACATCAGAAAATTGTGGGAAAATAAGTAACTACAGTTTCATCATTATGATAGCTAATGGCTTCAGGGATGACCCTAAAGCAGACAATATGGTCCAAACATCTTCTCCATCTGTGTCTCTGCTGTCAAGGGAAATCGGTATATACCATTTTTTATTTCTTTCTTGGTCCAAATGACAAGTAGCCCATGCAGTGTTCAG-CCCTGAACTTCAATGACTGGTGAAAGATGATGGATCGCGAATTGGTAAGTGAATCTAACTTTGCTTCAGAGCC----ATGAAACTAACAGAGCTACTCTTTTCC----TATAAATAGTGCTCTGTGTGTTTGTGTGTGTGCACACAGAAACACATGTGTGATTTCCTCTGGAAATCTGTCAGAATAA-TGAAATGTTGTTTTCATCATGATTCAGAAATGATTTAGAAAATAAGAAGATAGTACATAGAAGGCAACGAGGAATGAAAGGGATGTCATAAAGGTATTCTGTCATGAAAAGAGCTTAACAGTTTTTCA chr4 + 94230402 60624381 60624380 60624980 60624381 60624380 60624980 600 ATCTCACATTTGTA-TTTCTGCTGATAAGTGAATACCTTAGATCAAACATTTTGC---ATGTGGTATACGCCTTCAAGGACAAACACAAAGGCTTCTAGTAGGACTCAGTTTGCT----CAGTAATGCTGCAAAAACATCAGGAAATTGTGAAGAAATAAATAACTTGAGCCCCATCATTATGATAGTTAATAGCTTTAGGGATGGCACTAAAGCAGACAATATGGTCAGAATGAAGTCTCCATCTGTGTCTGTACTGTCAAGGGAAAGAGTTTTACATCATTTCTTATCTCACTTTTGGTCCCTGTGACAAGTGGCCCATGCGGTGTTCAGATCCTGCACTGAACTGACTAATGAAAGATGATAGACTGGGAATTGATAAGTGAATTTAACTTTACTGTAAACCCAACAATGCAACTA------CTCCTCTTATCCCTTTTGTAATCATTCTTCTA-------------------------------GTATGA-TGCCCCTGAAAACCTTCCCACATAACTAAAATTTATTTTTCACAGTGATTCAGAAGCGAGCAAAAAGGCAAACAAA-ATGACGCAGAGAGCAGGGCTAAATTAATGGGCTGTCAAAAAAGTATTCTCACTTGGAAGGATTTCA--GGCTTCTCA .....x........-...:.:..xx..::x.x.x.---------...:......:---.....x.:.x:x.:::.........-:.:..xxx...xx.:x.:x......x::x.:----:.::.x..:.x.x:xx.......:........:::......:.....xx..:::..............:....:....:.......:.x....................x:..::xxx...............x.:.............xx.x.x..:.:.....:....:..x:.:.......xx:........:........:........-:....x...xx.x.....::...........:..::.x......:.........:.......:..x:.:.x..----...x.....------..x.....x...----.:...x:.x.x:...:-------------------------------..:...-.x..:...:...:..x:.x:x....-.:....x.xx......:x:..........::..x:x.:..:::..:x.:.-.xx..::...::...:x.xx:...x..x...x.....x...:.......xx.x..:..:..x:.:.--:.:..:... 14M1D20M9I11M3D25M1I31M4D213M1I73M4I9M6D12M4I16M31D6M1D25M1I50M1D66M2D9M 410/580 70.7% 600/94230402 0.0% 69/580 11.9% 35507574 NA +3526 chr4 + 190214555 96148694 96148693 96148764 71 CAGTGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCCGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........-----...x......:.........:.::........x..x.x...xx:.x.........:.. 8M5D58M 53/66 80.3% 66/94230402 0.0% 5/66 7.6% 20115495 NA +17076 chr4 + 190214555 96149931 96149930 96150546 616 AAAATGGCTGCCTGGTTGCT--AAGGAAGAGGCTCCCAGAAAAGTGCAGTGGAAACTTTCCCATCCTTTGCTCTGAGATGCCTAATTCAGA-TCCCTGCTGACATGCCTAATGGCATTTAGGTCTGTGACAAATCTGATTTATTTGGGTGTTCTTCCTCTGCTTCCATAAAGGAACTGCTGATGTGGTGACATATTAGTCATCGCGCCTCTAGAGCAGTTTCTTCTGCTGGTAGCGGAACCTCTGTTCAGCAGGACTATAAATTTCTTTCAGAGCCAATGTCATGTTGCTGTTGTGCGTGAAGACTCTGTTAGGTC-------CTCTGTCAAGC------AAATCCCCCGACATCCATTTTCTTGAAGTCAAGATATCTGGCTAGACAACAATTTAGTTAATTAAGAAGAACGTTTCATAAAATGCTG-ATTGAGTGTGAGAGGAGGAGCTTGC----GATGTGTGAGGAAACAGTGGGGCTTGCAATTTTATAATTTAAGTAAAATTAAAATTGAAATGTATCATTAAGTATTATTGCCTCTAATAACATCTAAAGCAGTGTTCTGTTCTTTTCTCCTTTAAAATCTAATTACTGTACAACTAAAACTCCCTTCTTTGTAATAACACTTTTCTTAA chr4 + 94230402 60642507 60642506 60643125 60642507 60642506 60643125 619 AAAATGGCTTCTTGATCTCTGAAAACAACAAGCTTCTTGTGAAGTGCAGTTGAGGCTTACAAACACATTGCTGTGGTACACTGAGTTCAAAATCCCAGCTGACATTTCAAATGGTATTTAGACTTATGACAAATCTGATTTATTTGGGTCTCTCTCCAAAGCTGCCATAAAAGAAGTGCTGATTTGGTGACTTATTAGTCACAGCACCTTCAGA-CAGCTTCTTTTTCTAGTTGCGGAAATTA---CTAGCAGATCTATATATTCTTTTCATTGTAATAGATAT----TTGCTTTCTGTAAAGATGCTGTTCATTTGGCTGGACTCTGCAGTGTCTGATGAAGTATTTAAAGCTGTATGTCTCCTTAGAAAAAATATCCTGTCAAAAAACAATTCTGGTAATTGAAGATAATGCCTTGCAAAACGCTGAATTGAGTGATTCAGAAGGAACTTACTTCAGTTCTGAAATGAAAAACTGGCCCTTGTGGTTTTATAATTCAAGTAAAA-TGGAACTGAGATGTATCATTAAGTATTATTGCC-CAAATAACATTTATAAAA-------TTTCTTTTGAGAAATAAAATGAAATAACTA-ATTACAAGAAACATCCTCTCTATAACGAGGCTGTTCATAA .........x.:..:.:x..--..:x..x.:...:.:x.x:.........x..::...x.xx.:x.x.....x..:x.::.:x.:....:.-....x........x:.x.....:......:::.:.......................x.:::...xxx...x.......:...x.......x.......x.........:x..:...::...-...:.....:.x..:..x......x:.x---::.....:x.....x...::.....xx.:x.xx.x:..----:..:.x.x:..:....:x.....x:x.:-------.....:x:x.:------..:.x:::x:.xx.x:..x.::::xx..xx..:.....:x.::.:.x.......:x.x.....:.::.x..:.::.:::....:....-........xxxx..:....:...:.----.x.x..x:.x....x.x...xx....:::..........:........-.::..:...:.......................-.x........:..x.:x.-------x.......xxxxxx......xx...x...:-.:x..x.:..x:x:.:...:.:...::.x:..x...x... 20M2I69M1I122M1D28M3D38M4D28M7I11M6I88M1I25M4I48M1D33M1D18M7D30M1D40M 402/598 67.2% 619/94230402 0.0% 39/598 6.5% 35507424 NA +3004 chr4 + 190214555 96163428 96163427 96163483 56 TGTGTGTGTGTGTGTGTATACATAAATACACACACATATACATGTATACATAATAG chr4 + 94230402 37579521 37579520 37579576 37579521 37579520 37579576 56 TATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGTTAG .:.:.:.........:.:..:......:.....:......xx...::.x..:x... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 58583907 NA +3281 chr4 + 190214555 96163429 96163428 96163478 50 GTGTGTGTGTGTGTGTATACATAAATACACACACATATACATGTATACAT chr4 + 94230402 68837095 68837094 68837144 68837095 68837094 68837144 50 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT .....:..........:....:.x.x.:...:.....:.....:.:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 27326334 NA +4656 chr4 + 190214555 96181330 96181329 96181447 118 CACTATCTTTTTTTTAAGAGCAATGTATCTGTTTAGTCCTCAGCTATTTTTGCCCGTGACTCTAGCCATCAGGTGAA-TAGTCAATAACTTGACAGAAATAATAGTTCTTTCTGTCTTA chr4 + 94230402 60662622 60662621 60662740 60662622 60662621 60662740 119 CACCATCTGTTTCTAAAGAATAATATACCTGTCTAGCCTCAAGCTATTTTTGCCAGGGACTCAGGCAATTGGATGAAGCATCCAGCAGGTTGATAAAGATAGCACTGCTGTCTTCTTTA ...:....x...:.x....::...:..:....:...:.::x.............x.x.....x:..x..::.:....-:.x:..::.:x....:.:.:...::.x.x..x...x::... 77M1I41M 79/118 66.9% 119/94230402 0.0% 1/118 0.8% 35518708 NA +3193 chr4 + 190214555 96188687 96188686 96188735 49 CATTGTGAGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAGGG chr4 + 94230402 15442839 15442838 15442887 15442839 15442838 15442887 49 CATTGGTAAGTAGTCTTTTTTTTTTTTTTTCTCTCTTTTTTGGAGGGGG .....xx.:..x..:...............:.:.:..........:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 80745848 NA +11796 chr4 + 190214555 96198560 96198559 96199254 695 TTTATATTTCAATAGCACCTTAAAAATAATGTGTACTCTGGATTCTTATTACAAATCAATTTTTTTATATAAGTGGTCCCACAACTAAATATTAAAAAATA-GTAATGTCATGATGACATTTCAGATGGAAGAAAAGCACATTACATTGTCCT-AAAAATAATAAAACATATTTATCTGAACATCTGGTCATTTCAGCTGAAAAATCT-AAAGAGTCTG---CACAGTGTCTTCTTACATTAAAAGTCACAGACAAATAGTGGTTGAGAAAAAAAGAATCACTTGTGTGCTTTTACAATGTTAGACT-------TATTTAGATAATTAATTTATATTAGTTGACACTT--ATGAATGTTTTTAGTTCTCA-GTAATGCCAAGTGAATG---GCCCAATAGGTTGCTCACTAGCTAGAATACTGTTAACCTTGACTACAAAAT--------------GGAATGACATTCACAGCCTACTTTTATCTATCGGTAAAATAATAATAATAATGTTGTGTTCTTTCCT------TAAGACAATCCCATCTTTCATTGCTCCTGGCTGTGTGAAATACTGTTATAGTTGAAAGAGAATTTGCATAATACTTTTGAAAGGCTTAATAGCTATCATAATTTTAATCTA-TATGAAATGTTTATACTATATAAAAAGCTGAAGTTTTTTATTGTGAGAGAGG-ATTATTAAGGCATATCATCTAATCAAGAGAATGGTAGTAATA chr4 + 94230402 60672796 60672795 60673494 60672796 60672795 60673494 699 TTTGCATTTAGAGAGT--CTTGAAAACAATTTACTTCTTGGTCTCCTCT---GAATCAGGGTCTCCA-------AGCCCTATAAGTCCATGTAAACATGTACATGAAATAATCATGGCAGTGCCAAAGGAGTCATGTTGTATTTCCTGGCCCTTAGAAAAAAGTTAATAATTTTATCTGACTATGTGTGTGCTCCAGATGGACAGTCTGAAAGTATTTGGATTACAACACC-------ATTGAAAGTCAACCACTGACAGTGAACAGCAAAA----------CTGTAGGCTTTCCACAGCATAGATTCatttattatttatataattaattaGAAGTAGTTATGATTGGAATGATTGTATCT--TCCTCATGTTATCTCAAGAAAACTACTGCTTGATAGGATGCTTGTTTACTGCAGCTGTCTTGGCCTTGATTAAAAAATTGACGTCTGAACCAAGAATAGAACATATATCGTGCTATATGCTAC--ATACAAAAATAATTTTCAAATTGTGCTATTTCCTCATAGTTATACTAATCTTATCTTTCTTGGCTCCTGATTGTATGAAGTAGTTTTATTCTTAAGAGGGAATTTGCATAAAGCTTTCAAAAGCCTTAATAGCTATAATAATTTTAATCTACTATGAAGTGTTTACAATATATAGTAACTTAAGACAT----TTGTGTAAAAGGTAATATTATGCTGTATCTTCTAATCAAAAGCATAATGGAAACA ...::....x:.x..:--...:....:...x.::x:::...x:..:.x.---:.....:xx.:.::.-------:.:..:.:..x.xx..:.x..x.x:..-:.:.x:.x..x...:..x.x.x:.x...:xx.x:x:::...x.x.x.:...-.:...x..xxx..:.xx.........x:..x..xx:::.:...x..:.x.:...-....x:.:..---:...::::.-------...:.......xxx..x:.:....:x:::x....----------:...:x.....:xxx.xxx....:.-------......x..........x:x.x.....:xx.:.x--....x...x.:.--.:....-..x..x:....x:..:x---..:::.....x....:::.x:..:x.::xx.x..::......:..x.....--------------:....::x.:x:.:.x.x.:..x.xxx...:--:..x..x......xx.x.x:.....:.x......------..x:x:....::.......x.x.......::...:....:..x.x....xx..:.:..:............x:....::....x............x..............-......:......:.x......:x..x:.:.:::x.----.....x:.:...-.x.....x.x::....x.........:..x..::.:.x..:. 16M2D31M3D15M7D27M1I51M1I54M1I10M3I9M7D34M10D25M7I34M2I12M2D6M1I17M3I51M14I31M2D34M6I111M1I36M4D12M1I42M 422/658 64.1% 699/94230402 0.0% 78/658 11.9% 35525764 NA +10965 chr4 + 190214555 96222108 96222107 96222423 316 ATATAATTAATTGTATATGCAAGTTCTGGGGGCGTATATTCATTAACATCCTCCTGCTGTTCA-CATTTTATTAATGAAACAACCCATCACCCTCCTACCAGCAGACACTTAATTCCTTCCCAGAATCCATCTGCTTTTCATAAGCGTCCAAAGCCCAATTCCTTCACAAAATCAACTCTCAGAAAGCCTTAATTCCACGGGTCA----------AGATAGTTAGTTATTTCCTATTATCAGATGATCAGAAAGTGTGTTTTGGCTGTGATTATTACTCACATGATTGGGGGAAGGGTGATTAGGGAATCCAGGTACTCCTTGTAAA chr4 + 94230402 60679819 60679818 60680141 60679819 60679818 60680141 323 ATGGAATAAATGTGGTATGCCAGTTCTGGGGA-GCCTATTCATTAGTGTCCTCCTGCTGTTCAATATTTTATTAATGAAGGAACCCATCACCCCCCTACTAGCAGATATTTAATTCCTTCTCAAAATCTTTCTGTTTTCCATAGTCGTTTGAAA-CTAGCTTTTTTATGGAATCAACTATAACAAAGTCCTATTTCCATTGGTCAATTAAATACCAGATATT--GTTATTTCACGGCTACAGCTCTTTTTAAAATGTCTCTGAGCTGTGACTGATTCTAAGACAATTTCTAGGGAGGGGATTGGATGACAAAGATTCTATTTTAAAA ..:x...x...xxx:.....x..........:-.:x.........:::...............-:..............:x............:.....:......:.:...........:..:....:x....:...:....:x...:::..:-.:.::.::..:.:::........x.x.x....:.:..x.....:x.....----------.....x.--........x::x:xx...x.xx.:xx...:...x.:.x:.......:.:x.x..x.x.::...xxx:.:::..x....:.:x:.:xx..:.x..x:..xx... 32M1D30M1I90M1D50M10I7M2D103M 214/312 68.6% 323/94230402 0.0% 15/312 4.8% 35542289 NA +11878 chr4 + 190214555 96248187 96248186 96248525 339 AGTCATTTTACCAGAAAGTGTCATTGATTTACTTGTGGCAA----TATAGGATTTCTTGATTAAGAGTTTGACAAATCCCCACTGAAGCTGCATAATAAATCAATCTTTTACTGGAAAAGCCTGAGAGGGGGGTAAGTGAAGATGCTATACATTAATACCTGGGGGAGAGTCACTAACCTCTGTTCTCTGGTGATCAATCACCTCGGCTACGTTGTGCTGACAATGTCTGGAGGTCATCTGGTTAATGAGACAGCACTAGAAAATTCCTTCCCAGGATTACATTGTATCAGTCAATCATGAACACCCATATTAGACACCAAGATTCATTTGCTACTTTTAAGA chr4 + 94230402 60691252 60691251 60691585 60691252 60691251 60691585 334 AGTCTTTCTCCTTGGCATTAACAGTGATATACTTGTAGCAAGTAATAGAGGATCCTTTGATTAAGAGTTTGTCAAGTCCCTCTAGAAACTATATAGTAATTGGATCTCT--CTGGAAAACTTTGAGA-GGATGTAAGTAAAGACACTGTACACAAATACTTGGGGGACACTTGCTAATCTCTGCTCTCCAGTAATCAATCACTTCAGTTAGGCCAAAATGACACTTTCTGAAGATAATTTTGTTAATGA-ATGTCATCAAG-----CCTTCTCAGCATTATGCTATATATTCCACTCATTAGCTCTCACATCAGATTCTGAGCATCAGTTCTTATCTTAAGGA ....x..:.x.:x.:x.x.:x..x....x.......:....----..x.....:::...............x...:....:x:x...:..::...:...x.x:....:.--........x::.....-..:x......:....::..:....:x.....:.......x.x.::....:.....:....::..:.........:..:.:..x.:::x:x.....x.x....:..:.x..:.x........-.::x..::.::-----.....:...x....:::.:...xxx:..x....x.:.x.:..:..:...:x.::..xx...x..x:..::..x.:.. 41M4I64M2D16M1D121M1D11M5D77M 224/330 67.9% 334/94230402 0.0% 13/330 3.9% 35556935 NA +3079 chr4 + 190214555 96249699 96249698 96249773 75 AATTTAAAAGGAGAAAAAAGTATTTATTTTGCAAAGTCCTTTCTCTTCTTTCTGTTTTTAGCTATTAGCTGCAGA chr4 + 94230402 2776471 2776470 2776545 2776471 2776470 2776545 75 AATTCAAAGGGAAAAAAAAATGTTTTCTTTCCAAGAAAGTTGTGTTTTCTTCTGTTTTTTCCTATTAGCAATAGA ....:...:...:......:.:...x:...x...::xxx..x:x:..::..........xx........x::... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 93473228 NA +3315 chr4 + 190214555 96276916 96276915 96277095 180 ATGTTTATAGGAATTCTATTTATAATCACTAACAACTGGGAAACAAACCAGCTGACTTTCAATAGATGAATAGACATTTAAACTGTGGTACATTTGTACAATGGAACATTACTCAGTAATAAAATTAAACAAATTTTGATATGAACAACACAAAAATTTGGATGAATCTCAATAGCCTTA chr4 + 94230402 57508762 57508761 57508905 57508762 57508761 57508905 144 ATGTTCACAAG---TTTATTTGTAAT-----GCATCAGGGTCATAATCCAGCT--CTGCTTACCAATGAATAAAC------------------TTGTATCGTG--------CCCAATATCAAGAATAAACAACTTTTAAAATGAACAACACAAGAACATAGCAGAATTTCAGAGTCCTCA .....:.:.:.---.:.....:....-----:..x.x...xx.:..x......--..x::x.:x:.......:..------------------.....:x:..--------.:..:..x:..:.x.......x....:.x.............:..:x.:.xx....:...:x:x...:. 11M3D12M5D22M2D20M18D10M8D69M 100/144 69.4% 144/94230402 0.0% 36/144 25.0% 38768154 NA +3050 chr4 + 190214555 96290402 96290401 96290464 63 AGATCAAACAAATCAGTCAATTGAAATTTTCTTCTTTTCTTTTTTTAATCCTTTAAAAATTGG chr4 + 94230402 77605414 77605413 77605476 77605414 77605413 77605476 63 AAATAAAATAGATGAGTTAGGTGTGAATGACTTTTTTTCTTTTTTTAATACATTAAAAATTGG .:..x...:.:..x...:.:x..x:.x.xx...:...............x.x........... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 18684988 NA +3334 chr4 + 190214555 96301217 96301216 96301302 86 TTTAGAAGCATTAATGAGAGAGACAGAGAGTAAGAGCTAAAGTGAGAGCAAGAGAGGGGAGAGAGAGGGAGAGAAAGGGAGAAGAG chr4 + 94230402 77211972 77211971 77212057 77211972 77211971 77212057 86 TCTGTAAGAAATCATGTGTGAGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAGAG .:.:x...x.x.x...x.x......:.x..x..::.xx..::x:.x:.x:....:..:..........:.x....x.......... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 19089245 NA +9280 chr4 + 190214555 96301612 96301611 96302095 484 GGAGACTAGCATTATCTGAAATTCAATTGATGCTATTAAA------TGATTAGAACAT---CATTTAATTTTTTATGTCATAATCCTAAGAAAGGACAGATTCATGTTTTCCTCTGTTTAGTAATTGCTCTGGTCTG-------AGTTCATTTATAGCATCATTTACCAAACACAAACCCATA-AAAAATCATTATTAATTCTCAAGAAAACTCTTGAATAGATTGTGTATA----GTGCCATTAATTGAAGGTGTATTTCTCAAGACATATGAAGATGACTTCATGCTATTCAGTCAAGCACAAATCT-AATGATATGTATGAGGCAACAGAATTGATATGTCAGCATTTTTTATATAATTGGAAAGCTTCAGTTTGCCATTACCTCTATGCTAAATAACACACTTACATTATCCCCTAGATTGCAGACAAGCATACGCCTAATTATTTTATTTCTGGCGTGCATTGTAGAAGAATTCTTACGCAAATAATAGAATTAGAGAAAA chr4 + 94230402 60711199 60711198 60711650 60711199 60711198 60711650 452 GAAGACAAACATTATGAGGGACTTGATGAATTCCACTAGAGCCAATTGATTCTGCTACTGCCATTTTATTTTTTAT--CATA-------GAGAAAAGAGATTCTTATTTTCTTTCACCTAATAATTGCTTTGCTTAGGTTTTCAATTTCCTTTATGACATCTTTTACCCAGTATA----CATATAGGAATTATTAGTTTTTCTGACTAGATCTCATCTA---ACTATGTAGATACTGTGCTGATAGCTGAA------TTCCTTAGGTTATATGAAAATGCTGGAGTTACATGTAGCCTAGCACAGATTTCAGTCCTCT-----------CTGAATTGATATGTCTGCCTTTTTCATAAAATTGAAGAGCTTTGGGCTGTCAT--------------------CACTCCAATTATCTCCTAGCTTACAAACAGGCATAAGCCTAATTATTTTGCATCTGGCATGTGAT-TATTAGGACTCCTGACTTGATGACTAGATTAAAAATAA .:....x.:......xx.::.:.::..x:..x.:.:..:.------.....xx:x:.:---.....x.........--....-------..:.::.x......x.:.....:.:::::..:........:..x.:x.-------.x...x.....::....x......x.::.:.----....-.::...:....x.xx....x.xx.:.x...x.xx.---.:.:....x.----....::x..::....------..:..:.:.x:.......:...x:xxx:.xx:..x:..:.x......:..:.-.:.xx.x.-----------.x.............x..x.....:...x.....:.:.....::.x:..:...--------------------....:xx......:.....x..:..:...:.....x.............::x......:..::x.-..xx..:.:..:.:xx:x:..:.:x::....:.:.x.. 40M6I12M3I15M2D4M7D48M7I31M4D4M1I35M3D10M4I15M6D52M1I8M11D53M20D65M1D38M 287/430 66.7% 452/94230402 0.0% 76/430 17.7% 35590413 NA +3597 chr4 + 190214555 96306716 96306715 96306794 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...xx.........::.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 20273515 NA +33560 chr4 + 190214555 96316706 96316705 96317356 651 ATAGTTTAGT---TAGAATTAACAATGAATATGAAGAAAATCCAAATTGTTTCGTAGGCATGCCGGGTTGTCTCAGTGTTTTTCTTTACTTAAATGATATTGACGGGTGTCCTTATTGAAGAGGAAATAAGTATGTGCTTGGAGCCTCACAGACAACCATTCATCATTCTCTTATGCAAAAGACAGAACCCGTGTGCCAGCACACAAAATCCAATGGCAGCCACAGTAGCAGAAAATCAATAGACTGTATTAGAAAACTCAGAGGCTAATCAGAGCCCAATCTGCAGGCATGATGTACTCTAAAAGAAGCATTGCTTTAGGACATAACTCAACTCTCTGAACACCAAAGACTGCAGCTTAATTCAAGCATTTAGGGGGAAAATGATGGTCTTTAAAAATACACATTTTGTTCTTTATTGCCTCCCAGAGAAGCTTCAGTGTAGTACTCTAATGAATGATGATAATATACATTCTTAAAAACTGATGTTAGCTCAGTCGTTATGCCCAAATAGAATGAGTGTCCCTGCTGTGTGAAGCAATGAGATGTCATTAGTAAGCAGCATCTTCGCT--AAATGCAG-GATGCATATTGTTACTTGTTAAACGCACTATTAATATCTATAAAGGTAAATGACAATTGGTCCTCTCCTTTCATTT chr4 + 94230402 60724636 60724635 60725276 60724636 60724635 60725276 641 ACAGTTTAGCAGCTAGAATCAGTAATAAA--------AAAT--AAAGCATTCCTTAGATGTGTTGTATTGT----ATGCTTTTCTGTGCTTAAATGATATTGACTGTTGTTCTTATTGGAGAGGAAATAAGTATGTGCTTGGAGCTACTCAGACAACGATTCATCATTTTCTCATGTGACAGAAAGAATCCCTGTGCCAGAATACTAAATCCAGTGGCAGCTACAGTAGCAGAAAATCAGAAGTCTGTATTAGGAAACTCACAGGCTAATCACAGTCCTATTTCCAGGCATCATGCACTTCTTCAGAAGCACTGCTTTAGGACATAATTCAGTTCTCAGAGCACCACAGTCTGCAACTTAATTCAAGCATTTC-ATAGCAAATGAGGGT-TTGAAAAATATGCATTTTGTTCTTTATTTCTTTCTAGTGAAGCTTCAATGTGGCACTGTAGTGAATAATGACAACATTCATTCTTAAAATCTGATGCTGGTTCAGTCATTATGCCAAAATAGGATGAGAAACCCTGCTGTGAAAGATGATGAGATACCATTAATAAACATCATTTTTTTTTATAATATAATGGTGATTTTTGTTGCTTGGTAAACCCACTATTAATATCTGTGAAGGTAAACGATTATTGCTTTGCTACTTTAATCT .:.......:---......:.::...:..--------....--...x::..:.x...:::..::.x:....----:..:......x.:................x.x...:.......:..........................:x.x........x..........:...:...::.x...x....:..x........x.:..x.......:.......:.................:x..x.........:.......x..........x..:..x..:.x.......x...:...::xxx.......:...............:...::....x..:.....x..x.....:................x-:x:.x......x...-..x.......::................x.:.:.:..x.........:...:.:...x..:.....:....:..:..x...........x......:.:.:......:.......x......:.....x:x..........x:.::::.......::.....:...:..x...:..:x:.--x...::.:-.:..xx.x.....:....x.....x..............:.:........:..:x....x.::x..x....x..:. 10M3I16M8D4M2D28M4D298M1D15M1D180M2I8M1I76M 495/635 78.0% 641/94230402 0.0% 22/635 3.5% 35592070 NA +17276 chr4 + 190214555 96348802 96348801 96349037 236 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCACAGCTACTTGTATACACTTGACCGAAGACCAGTCCTCGGATCTATCGAGGATGGTCGTCCTCTTCAACCAAGCGTGCAGCTTTGGGAGGGACATACATGGAGCAGTGAGAGAGGAAGGGGACACCCGCATAGCCAGCCAGATCAGCTGAGTCAACCCTGACAATCAATGGGGTGACAGATGTCACGGCCAGATCACCCTCACATC chr4 + 94230402 24950307 24950306 24950540 24950307 24950306 24950540 234 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACC-GTATACCCTTGACTGATGAACGGTAC-CGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATC ..............................:.......:-......x......:..x..x.:..x.-..xx.......:...x.............:................:.........::.........:..............:.......:.x.................::.:.........:::.....................:.:........:.......... 39M1D26M1D169M 205/234 87.6% 234/94230402 0.0% 2/234 0.9% 71398495 NA +3178 chr4 + 190214555 96364484 96364483 96364545 62 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGAAATTCAT---GGTTTGTGAATT chr4 + 94230402 24350471 24350470 24350535 24350471 24350470 24350535 65 CAAAAAAATGCAAAAGGCAAAAAGAAAAAAAAAAATAGAATGTAATTCATTGGGACTTGCAAATT ........x:x....::x.....:...........x......x.......---.::...::.... 50M3I12M 49/62 79.0% 65/94230402 0.0% 3/62 4.8% 72014013 NA +24179 chr4 + 190214555 96406603 96406602 96407704 1102 TTTAACTTTTGAAATAG-----AAATCTCC----AAAACAAAAGTCTATCCTGGAATTGTTGACAAATCCTTAACTA--GAATTTTTACTGGTTGCTACCATAATACTGTACATATTTCTTTGTGAAAGAATTGAAGTTGCTAATAATAAAGCTTAGCTTTATAATATTGAAATTGCCTCTCTCTTTTTTAAGATCCTGGGAGAAAAACAATTAGAGAAAGACAATTTAGCTAAATAGACTGCGAAACAACCCGGCTGAATCCAGGCTTCATTAATCTCCCTCTTTCTCCTCTCATATTTCCCACGAATGGCTTGATTATGTTTACCTGACATCCCCACACTTCCCTGCTGA-----CTGTGTTTGCCTCAAAGCCAAGATAGACAATGTTTTCTAC----AAACATTTATACTTCCTTGCAGAAAGGCCAGCCTTTGTGAATATATAATT--GAAGCTTCAGTATGCCTGTTCCTCTTTCCCAGAATGGAAAAGCACTTTCTGAACCTAGTCTTGAACAATAGATGTGAGCATAAGCAGGGTTGCTC-----TGGGGTGCAAATGCTTTATATTAGCTAAGCAAACACAAAGTCAGAGGTTAGCAATTCATGCCATGAATA-AGAAGCATGCCC-----CCCAAAAGGTTGATCAAACGTTGAACTCCTTTAAACTTTCCGAAGTCAGGGCTTTAGAAATACGGCTGCCATGTTTTGATGCCCTTTACCCCCAA--ATCCAGCAGGAT------AATGGCCTCTAACTGTTGCACTGAAATAAAGTGCTTTTT-CTAAGATGAAGCTCTTTGCAAGCACA----GTCTGAGATGAGAGCTGTGGAGAAA--TAACAAGCAGCAGAGCTGATTTTCTGGAGCTCTCTTTATGGACTGAGCCATAAATTTATAACGATGTGAAGGCTTCAGAGATTTCCTAGTTGCCCTCATAAGAAATAGACATCATTCTATTTTCTGACAGTTCAGGTAGTAG-----AATTAGGCACATT-TTCCCCACAGTCTCCAGGCTATGAATCTGAGTAACTAATCTACTGATAATTATATGTGATGCCTCAAATTAGAAACCAATATTGCATCTGTGAATTAATGGCATTTCATTATGTATTACTGTCTGCATTAATAAATAGTGACT chr4 + 94230402 60753264 60753263 60754365 60753264 60753263 60754365 1102 TTTAGCCTTTAAACTAGTTTTTATATCTCATGGAAAAATAGAGGTCTGCAGCACAACTGCTGACACATCCTTAACTATAGCATTGCTACTGGGCGCCGCTATAATACAGTACATATTTCTTTGTGAAAGAACTGAAAGCTGCAATAATACAGCTTAACTTTATGATATCGAAATT----CTCTGTGTTTGTACCTCCAGGGAGAAAAACAATTAGAGAAAGACAATCTACCTAAATAGGCTGGGAAACTGAATTGCACTGTCTATGCTTCATTACCTTCCCTCTTTCTCATCTCACACTTTCCACAAATAGCATGATTATGTTTACCTGACATCTTCATGCTTCCCTGCTGAGCAAGCTGAGGAAGCCTGGCAGCTGAGATCAGCTGTGCTTTCTATGAAGAAAAACTTATATTTAACTG------GTCCAAATCTTG-AACCATTTCAGTGAGAATCTTCAGAACA-----TCCCTGAGCTCAGATAAGAAGAAAAATATCTGAAATT--TCTCTGGCAGTAGACttttttttaatttttttttttttttaatGAAATGATAGTAACTAGTGTTAGCTTGGCTG----GAAATGTGTTGATAGTTGTTTAGTTGCTGGATAGAAAGGCATGGCCAGAAATGCTAAATGTTGACT---CAGTGAGTGCCAT--GACTGTTAGAA-----AGCTTAACAAATTTTTCTGGAA------GGTGCCTCTTATCAGAAGTTGTTCAAGAGTGTTTTTCAAGTTGCTTCAA---GTTGCACTCAAATAAAATACCTTTTACAGATATAAGCCTTACTATAAAGAAAAAAGATCTGGAAGAAGGTCTGCAATGAAAGTTACCAAATGGT--------TTTTCAGTGACTACTTTGAAGAGCTGAATCATAAATCCAGAACAACAAAAAGACTTGAGAAATATACCGGCTGCCGTTATAAGTAGCAGGTAC--TTTCTTCTTCAGACTTCTCAGGTAATGGAGAACAATTCAGCACTTTCTTGTTCTGAATTGCCAAATTATAATTCTGA-TAAGCAAAATACAGATAATTAGACACAGTTCCTCAAATTAGAAAGCAATATTACAAGTAAGAATTGATGACATTTCATGATGC-TTATTGTCTA-ATTAATAAACTATGACT ....:.:...:..x...-----.x.....x----....:.:.:....::xx::x..:..:.....x...........--.x...x:......x:..::.:.......x.......................:....:x:xx:.......x......:......:....:......----....x.x...xx.xx...x............................:..x........:...x.....x:xx:x..xxx:..:.x.........x::............x.....:.:..:....:...:..x.....................::..::............-----...x.xxx....x:x...::....x::.x:..:......:----...x.:.....:..xx:..------.x...:x::...-:.x:..x.x.x.--...x......x.::-----...::xxx.:....xx:...:.:x.x.x......x:.--...:x::..:....:x.xxx:x...x:xxxx..x:.:-----..:::..xx.:.:x:.x:.:......x:..x:----:..:.xx.xx.x...:x:..:.xx:xx..:...-.:.:.....x..-----:x.x...x.....::---.:x...::x..x.--:...x.:x...-----:....x.x....x:xx...xx.------.:....::...:.xxx.:--:.:..:x..x:.------.:.x..:..x.---........x.......:.:.:....-.x:.x..:.:x..:x:.::..:x.x.----:....::.x:..:x...:::x....--..x...:::.:--------.....x.x::..x::..x.x.::....::.......::.x...:.::x:...:...x...:..x.x.::.:....x.:.....x.::..::.:--..::x.:...x...xx:.......:.:.-----....x:....x..-..x::.xx.:.:x...:::...:.x.....-...x:..xx...x........x.:::::.x..............x.......:..xx.:x.....:...:........x...:-...:.....:-.........:x:..... 17M5I8M4I43M2I96M4D173M5I40M4I19M6D12M1D12M2I14M5D37M2D37M5I32M4D33M1I12M5I15M3D13M2D11M5D22M6D18M2I12M6I11M3D25M1I26M4I25M2I11M8D93M2D28M5I13M1I30M1D83M1D10M1D17M 695/1048 66.3% 1102/94230402 0.0% 108/1048 10.3% 35653339 NA +3370 chr4 + 190214555 96410148 96410147 96410223 76 CCTGTTCACTCTGAT-GGCAGTTTCTTT------------TGCTGTACAGAAGCTCTTTAGTTTAATTACATCCCATTTGTCAATTTTG chr4 + 94230402 52780422 52780421 52780510 52780422 52780421 52780510 89 CCTGTCCTTGCTGACAGGCAGCTACTCTAACATCACTTGCTGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.x:x....:-.....:.x..:.------------.....:.....:....:......:.:x.x..x..:.............. 15M1I12M12I49M 59/76 77.6% 89/94230402 0.0% 13/76 17.1% 43629726 NA +8093 chr4 + 190214555 96417819 96417818 96418152 334 ATAAACACACAAATGGGTTCTACCTAGTATAAACATATATCATTTAAATAATTCAGAGTAGCTAAGGGGATTGAAATGAATAAAAAGTAAGGTTGCTAGCCTTTCAAAATAGTTGCTAGAGCCTGACTGTTT---TTTTTAAAGCCAGTATTGTTCATATTTATTTCTCCTTTCATCCTATGTAGTATTCAAGAACTTATAAAAGTGCATAA-TTTTTAGCCTTTTATTTATTTATACAAAGTAATTCTGGCATA-----------------------TATACCACCACTGGCTCTAACAAATATGACAATGCGGCAAATAAAAACATGCTTCATTTATTACACTGCAGAATGGTGCTGTT chr4 + 94230402 60755701 60755700 60756041 60755701 60755700 60756041 341 ataaaaGCACAAAT--------CCTGTACTATATGGATATTGTTTAAATAATTCATTATGACTGTGGGGGTAGAAGTAAATACAAAGAAAAAT-GCTTGCCTTTTGAAATACTAGCTAGAGCAAAGTCTTTTACTCTTTTCAGTCTGGAGTAGCTCATATTT----------TCTTGCTATGTACTCTTCAAGAACTTATAAAAGTGCACAACTTTTTAGGGTCTCTCTTATTTATGT-TGGTAAAGCTGACATAGTCCCATAGATCGAAGCACTGTTCACAACTCCAACCACTGAAACAAATGTGATCGTGTAACATATAAACTTGCAGTTCGTTTATTAAGTTGGATAACAGCCCTGCT .....x:.......--------...:xxx..x.::x....::.............xx:.::..:x....:.x...:.:....x....x..::.-...x......::.....x.x........xx::::x...---:....x.:x.::.x:.x.:........----------..x.x.......x.x......................:..-.......xx.:.:x:........::-x:....xx...:....-----------------------:.:.x.x...x:x:..xx.......:...:x:..:::..x.....xx::::x...:.......x::..x.x..::.:x...:. 14M8D71M1D38M3I27M10D40M1I25M1D16M23I83M 211/314 67.2% 341/94230402 0.0% 47/314 15.0% 35662118 NA +3043 chr4 + 190214555 96432458 96432457 96432501 44 AGATTATATATACATATATATATACACACACACACACACACACA chr4 + 94230402 4409078 4409077 4409121 4409078 4409077 4409121 44 AGGCTGTACATATATATATATATACACACACAGAGACACACACA ..::.:..:...:...................x.x......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 92023380 NA +12036 chr4 + 190214555 96443972 96443971 96444346 375 AGAAGCGGGGCTAGTATAGCATATAAAA------------TACAAGAGCTGAACAGAAGATCTTTAGTTTAGGCACCTCCACTGTTACCGTGTACAATTTTTTAAATAAATCTCTTCCTATTCTCTGGCCAGTCTGCTAAATGAGGCATACAAGGTTATTACTAAGCTCACATTTTCTATGTGAAGAGAGAAATATCAA-GTTAAGCT------ATTTTACAGTCAATCCTATTAGCATTGTTAGCTGCACCCAATAGGTTAATGAATGGGGCATTGCCTCTGTGAGTGACTAAATACCATTTTATGTTCTTTTCTGAAATTTAAGAAATCAAGAAAAGGCAAAGCAGTGTTTGATGTGCATTTAAATATGAGCACAATGCTATAACTAAAGAA chr4 + 94230402 60766728 60766727 60767106 60766728 60766727 60767106 379 AGAAATTTGGCTATTAGAGTATGCAAAAAGATACAATGAAGACAAAAATATAACAGCAGGTGCTTAATTTAG---------------CCTTCTGAAATCCTGTGAATAACCCATTTCCTATCCTCTGGTCAGGATACTAAATGAGGCATGCTCAGTAATTACTGTATTATCCCATTCAGCAGGGGGACGGAAACATCAGTGCTAGGCTTTTGTTATTTTACATTCACCCCCATTAGTGCTACTTGCTGCACCTAATAGGCTGATAAATGGGGTATTGCCACTGTCAGTGACTAAATGGCACTTAATATTCCATTTTGAAGTTCAAGAAATCAGAAGTAGGAGGAGAGGGTTTTGATGGCCATTTGTTCAGTGACACAGACTTATAATCAAGGAA ....::xx.....x..x..:..::....------------x....:.::xx.....x..:.x:...:.....---------------..x.x.:x...::.x.:.....x:.x:.......:......:...xx.:.............:.xx:..x......:x::.xx.x:x...x:::x.::..x:....:....:-.:..:...------........x...x:..:.....:::.::.x........:......:.:..:.......:......x....x...........:x..:..x..:...:x..:....:..:.........::.:x...x::..x:.xx.......xx.....:xx:.xx::....:xx:.....::..:... 28M12I32M15D112M1I8M6I180M 241/360 66.9% 379/94230402 0.0% 34/360 9.4% 35677244 NA +3147 chr4 + 190214555 96452560 96452559 96452619 60 TTTGTTTTCTTTTTCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTCTGATATGGAG chr4 + 94230402 44980307 44980306 44980366 44980307 44980306 44980366 60 TTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAG ..x.::...:....::......:x.:............:.........xx.::x...:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 51472253 NA +3010 chr4 + 190214555 96452568 96452567 96452614 47 CTTTTTCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTCTGATA chr4 + 94230402 44980312 44980311 44980358 44980312 44980311 44980358 47 CTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATA ...::.:..........:x.:.:..........:.......:.:... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 51472256 NA +3173 chr4 + 190214555 96457224 96457223 96457352 129 AGGTGTTTATAAAATAATAAAAACACAAAGCTGGTATTTTCTTTTCCATTTTGAAATATACAG-GCCTTGTC-------CATTATTGAGTCTACAAAACCAAACATATTTTCTTGCAGATTTTAAATAAATTTATTG chr4 + 94230402 21822937 21822936 21823059 21822937 21822936 21823059 123 AGGTACTTAAAATACAATTAAAATA----------ATTACCACTTTA--TTTGACAAATTCAGTGGTTTATCATATAAACATTA--GAGGCTGCAAAAGTAAAAATATTTCCTTACAGATTGCAAATAAATTCATTG ....::...x..x.:...x....:.----------...x:.x:..:x--.....x.x..x...-.x:..:..-------.....--...x..:.....x:...x......:...:......x:.........:.... 25M10D12M2D14M1I8M7I5M2D51M 86/115 74.8% 123/94230402 0.0% 22/115 19.1% 74634287 NA +3670 chr4 + 190214555 96460142 96460141 96460202 61 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........::::........x.xx.x...x.............:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 20426938 NA +3062 chr4 + 190214555 96479299 96479298 96479362 64 AGTGG-GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTAGGAGAATGGCTTGAACCTGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....-....x......:.........:.::........x:xx.x...xx:........::.:.. 5M1I59M 48/64 75.0% 65/94230402 0.0% 1/64 1.6% 20446099 NA +3101 chr4 + 190214555 96482518 96482517 96482577 60 TTTTCTTTTTCTTTTTTTTTTCTTTTTTGAGAGAGAGTTTCTCTGTCTTCAGTACTTAAA chr4 + 94230402 51122858 51122857 51122917 51122858 51122857 51122917 60 TTTGCTTTTTTTTTTTTTTTTCTGTTTTAAAAGCTTCCTGCTCTGTTTTCAGCATTTAGA ...x......:............x....:.:..xxxx:.x......:.....:.:...:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 45359660 NA +3484 chr4 + 190214555 96560910 96560909 96560988 79 GTGGTGCGTGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--......:.........:x.:........x.xx:x...x.:.........:.:..x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 20527709 NA +18126 chr4 + 190214555 96581887 96581886 96582273 387 CCATTTCTAAGTAAACAAGCCTTCACAGAACTCAT-ATGTCTAA-GTGTATTTGATAGATAAATGAATAACATCAAAACTAATTCTCTGCTTAATGGATGTACAACTTTTCTAGCATCTACTCATTTGTGTGTGAATGCACCATAAGTGTAGGTGGTCTTCCAGTCAGTTATACTTCAGCTGAGCATGACATGAGGAGTACACAACAAAACAGCCTCCTTGAGGACGCAGTAATGGAGAACAACAAGACAGATAATAATGAGGGATTAGAACACTGCCTCATAAATCTACAGTGATGCTGACAAGATTTCAGCTTTGAGAATGACCAACCTTTCTCTTACTCCTGAGGTGCAGTGAAAGATGGTAGGCTAATGGGCTTATTTTGCCAAA chr4 + 94230402 60801015 60801014 60801401 60801015 60801014 60801401 387 CTGTCTCTTAGTAAACAAGCTTTCAGTAAAACCATGATAAATAAAGTACCTTTGATAGATAAATTAATGTCATGAAAGCTAATGCTCTGCTTA-TGGATGTACAACTTTACCATCATCCATTAATTTGTATATGAATGAGCTGTAAGTATAGGTGATCTTTGAGTCAATTATACTTCACCTAACCATGGCATGTAAAGTGCACAACAAAACAGCCTCCTTAAAGTTGTAGTAATGGTTAAAAACAGGACAGGTAATCCTGAAGGATTGTTTTACTGGCTCATAAATCCAGATGAATGCTGACAAGA-CTCAGCTCTGGGAATGACAAACCTCCTTTTCTCTTGTAATGTTTACTTGACGATGCCAGGTTAATGATCTTATTCCATTAAA .::.:...x...........:....xx:..x:...-..:xx...-..::x..............x...:x...x...:.....x.........-...............x.:.x....:.:.x......:.:......x:.::.....:......:....:x.....:..........x..:.x....:....x::...:....................:.:.x:.:........xx..x....:.....:....xx...:.....:xxx:....x..........:.x.xx:............-:......:..:.......x.....:::.:.:x..:x.:.x..x:.x.x:.x....x:...:.....:x......:::::... 35M1I8M1I48M1D212M1D82M 284/385 73.8% 387/94230402 0.0% 4/385 1.0% 35780872 NA +17676 chr4 + 190214555 96585157 96585156 96585775 619 TGGCAAGAGAGGAAAAAAAGTACATAGTCTAAAAGTGGGCAGATTAGTTGTAAAGATGCATTCTTATTTCTGTTACATTTGCATACAAATTGATCTGGAAATCCATCCGCTGACTCCATTAATGAGGTCAAGAACAACATACAGACTTAATCACACCCTGCTACAGGTTTTTTTGGCTAACTGTCTCTGGGGATGAAAATTCCAAAGTATGACATCTTGCTTTCTATTGCATTTCCTTTCTTTGTAGAATAATTTCT-----ACCATGAGATCATAATTAAATGTCATTTAGAAGTTCCCTCACTTTTTATTTTTCCTCCCTAACTATTGATGTGTGTCATCCTTGTCACTTTAATTGAACTTTGAGACTTAAATGACACGTGGTGGAATTTGGAATGACAGTATAACATTAATGCATTATTTCAGTCATTTGAGCAA--AAATCTGAGTCTTTGAATTGGAATTCGTGCTAAGGAA----------ATAGGAAGTA--TGAATACATTAAAATTTTCTCTT-------GCTTCTC-------------TATCCCTATTGTTTCTATGCC-ATCATGTCATAGATACTCTTTATTTGAAGATACTGTGTCAAATCATATTCTGTAATATGACAATTAATAAAAAAATTCTATAATTTTC chr4 + 94230402 60803713 60803712 60804335 60803713 60803712 60804335 623 TGAAATGAGATAATGAAGAGTCCAGA-----AAGGTGAATAGCTCAGTGTTATAG-CACAATCCCTTTTCTTCTACATTTGCATGCAAATTGATCTAGAAATCCATCAGCTGACTCTTTTAATGAGGTCAAGAAAAACATGCAGAGTTAATCAAACCCAGCTATAGCTTTTATTGGTTAACTGTCTCCAGGGATGAAAACTCAGGAACACA-------------------ATTTTTCTTCTGTGCAGAAACACCTTGCCAAAACAGTGGTATCAGAATTTAATTTCATTTAAGAGCTGCCTCTCTTTTCCCTTTTGCACAAAAGTTACCCATCCATATCATTCTTGTCATTTTAATTGAACTTGTAGACATGACTGGCATGTGGTGGAATTTACTTTGCCTGTATAACAATAATAAATTATTGCAGAAGGTTTGATAAAGAAACCTGGGACTTTGCA--GAGAAGAATAGTAAGGAACTGGGGATAGAGAGGAAATAGTTTCATGAAATACAGTTTTACCTGCCAGTCAGCTTCTCTGTTTTATGCATTTATTCTTGTCATTTTGCAGCCTGTTGTTTCTTAATTATTCC--------AGACACTATGCC-CATCATATTCTGAATTATAACTATTAATCAAATGGTTCAATCTTTTCC ..:x.x....x:.x:..:...x..x.-----..:...:::..x.:...xx..x..-::..x..::x.....x:...........:...........:..........x........:x................x.....:....x.......x....x....:..x....x....:..........::..........:..x::.::.::-------------------....:::....x..:....xx.::.:x-----..x:..:x....x....x...x.......::..:.x....x.....:x:....x.x.xxx.::..::x..x::.:....:.......:.............xx....x.:.x..:..:............:xxx..x.x........x....:x......x...xx:x..x:::..--...:...:.x.....x.--.::.xxx:.:x.......----------.x.....:..--.xx..:x.x..x.:....x:..x-------.......-------------...:.:.:.::...:xxx...-:.::.x..x..:x..:..:--------...:...:..:.-x...........x.x...:..x......x...x::...x..xx...:. 26M5D24M1D155M19D27M5I176M2I17M2D18M10I10M2I23M7I7M13I21M1I19M8D12M1D48M 407/583 69.8% 623/94230402 0.0% 76/583 13.0% 35781444 NA +4173 chr4 + 190214555 96586676 96586675 96586864 189 TTACAATATATTTTATTAAATGTATATTATAA-TAAAATATTTATTGATGTGATAAGAGTTCCAGTTGTGAG--TTACATTAAATCGTGTGTTACTAAT--------ATACAA-ACAAAAAACAGAAAATAAATAGGCACTTATGTAAGGCTACCCTGTGCCACAGCTGGTTCCCAATTAATGGACATGAATAGTCCACTA chr4 + 94230402 60806334 60806333 60806525 60806334 60806333 60806525 192 TTACTTCATATTTCATAA--------TTAGAACTAAAGCCTTTGATAATGTGATAAGTGGTCCAAATGGGGGGGTTGCTGTAA-TAATGTCTAACTAATTATCTACTGTATAATAAAAAAAAAACAAGAGGAACAGACACCTGCATAATGCAAGCCTTTGGAACAGATGTGCCCCTATTAACAGACATGAATTGCCTATTA ....xx:......:..x.--------...x..-....::x...:x.:..........x.x....:x..x.:.--..:.xx...-.x:...x.x......--------:..:..-.x......x.x..:.x:..:..:...:.:::...x..x.x...x..xx....x..xx:...x.....::.........x.:.:.:.. 18M8D6M1I39M2I9M1D15M8I6M1I87M 124/180 68.9% 192/94230402 0.0% 21/180 11.7% 35780342 NA +3069 chr4 + 190214555 96589247 96589246 96589291 45 CTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACATA chr4 + 94230402 60831531 60831530 60831575 60831531 60831530 60831575 45 CTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACA ..x.....x.............x.:.......:.:........:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 35757716 NA +3088 chr4 + 190214555 96589248 96589247 96589314 67 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACATATAGATAGATAGATAGATATAGAT chr4 + 94230402 60831534 60831533 60831600 60831534 60831533 60831600 67 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT .....x.............x.x.......:.:....:.....:::.x.:xxx..:...x..x..x.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 35757714 NA +3260 chr4 + 190214555 96589248 96589247 96589320 73 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACATATAGATAGATAGATAGATATAGATATATAG chr4 + 94230402 60831530 60831529 60831602 60831530 60831529 60831602 73 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGG ...x.....x.............:.:.......:.:..:...:.:.x::.x.:xxx..:...:.xx.....:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 35757718 NA +3866 chr4 + 190214555 96589958 96589957 96590040 83 CATAGTGGCAGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x....:.:.........:.::........x.xx.x...x.:..............x:xx:..:..:.. 9M2D72M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 20556761 NA +3227 chr4 + 190214555 96592923 96592922 96593016 94 CATTTTTTGGTCTGCCAGAAACCTGGTCTTCAGCAAAAGAAAAAAAAAGAGAGAGAGAAAAGAGAAAAAGACAATGTAAGCACAGTAATTTCTA chr4 + 94230402 47022694 47022693 47022787 47022694 47022693 47022787 94 CATTTTTCTTCCTGCATCAGCCACATTTTCCAATTAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGTAGAGAATGTCAGGAAAGTGATTTTCA .......:xx:....xxx.:x.x::x.:.:..::x...:...................:.::::.x:x...x.....x..x.x...:....::. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 49570229 NA +3434 chr4 + 190214555 96593005 96593004 96593211 207 CAGTAATTTCTAACCTACAAATAATATTCTTCTTTCATTTGCAGTTGCCATCTGTTGTAAGAACTGAATTAGTCTTTCTTTCTTTCTTTCTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTT chr4 + 94230402 63697067 63697066 63697239 63697067 63697066 63697239 173 CAGTAATTTCCATGCT----------TTCTTATTATATTTAAA------------TGTGAGTACTCCAC-AGACTTTATTCCTCTCCTTTCCGGTGTTTTCT-----------CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..........:.xx..----------.....x..x:....:x.------------...:..x...xx.:-..x....x..:..:..:..::.xx.x:.....-----------....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:...:x:xx.......:.x:.::.:.:...:...::..:...x... 16M10D17M12D14M1D32M11D94M 111/173 64.2% 173/94230402 0.0% 34/173 19.7% 32895938 NA +3370 chr4 + 190214555 96593060 96593059 96593159 100 TGTAAGAACTGAATTAGTCTTTCTTTCTTTCTTTCTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372010 57372009 57372109 57372010 57372009 57372109 100 TGTAAGAACATGCTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .........xx:x.x:x.:.......::..x.::..x.:::.:....::.x..xx:.x..x.:.........:...::...x.....x..xx:.x..... 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 39221050 NA +3231 chr4 + 190214555 96593068 96593067 96593155 88 CTGAATTAGTCTTTCTTTCTTTCTTTCTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372022 57372021 57372109 57372022 57372021 57372109 88 CTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...:x..xx.....::..x.::..x..::::.:..::....x.:.x..x.:.........:...::...x.....x..xx:.x..... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 39221046 NA +3048 chr4 + 190214555 96593080 96593079 96593144 65 TTCTTTCTTTCTTTCTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 69568209 69568208 69568273 69568209 69568208 69568273 65 TTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ..x....:.:....x...:....:.x.:..x....:.:x:...xx.....:...:...:...:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 27024871 NA +3511 chr4 + 190214555 96593098 96593097 96593225 128 TTCCTTTCTTTCATTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCC-CTCT---------TTTCTTTCTTCCTTTTTATTT ..:x..:..:..x....:----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:..:..:x.xx.....x......-....---------..........:......x... 18M4I75M1D4M9D21M 82/118 69.5% 122/94230402 0.0% 14/118 11.9% 32895980 NA +3597 chr4 + 190214555 96593101 96593100 96593229 129 CTTTCTTTCATTTCTTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTT----------TTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:.x:.:.....:----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x:..----------.:..x.xx...:......:.:.::..........::.:...x... 19M4I55M10D45M 79/119 66.4% 123/94230402 0.0% 14/119 11.8% 32895984 NA +3457 chr4 + 190214555 96593107 96593106 96593239 133 TTCATTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTT----------------ACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:...:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx:....----------------x..:.:..x.xx.......:..:::::...........:......x... 17M5I51M16D49M 78/117 66.7% 122/94230402 0.0% 21/117 17.9% 32895989 NA +3323 chr4 + 190214555 96593159 96593158 96593229 71 TTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 69163348 69163347 69163418 69163348 69163347 69163418 71 TTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ..::......x..............x.::....:::x...:.x....:.x..x:..::.:.x...x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 27429811 NA +8528 chr4 + 190214555 96626510 96626509 96626761 252 ACTAATTGTGCTTCCTTGCTCTTTCTAAAAGCATGAAGGCTGCTGGTTGTACCTTAAGGGGACTGACAC-TAAAATGAGTAGGAATCAGGTTTGTCATAAGATTTGATCT---------------GAAATAGAAAACAGAGA---------AGTATAATAATGTTTTGAATTTGAATAACATGTTAGCTAAGAGCAAC--AAAGAAACATTAATTCAAACAGAAGGGAAAGTAGCTAAAATCACATTATACAGTAGCAATCACAGAATCGCTGAGGGAC chr4 + 94230402 60819103 60819102 60819379 60819103 60819102 60819379 277 ACTTTTTTTATTTTCTTTTCCACTGTAAAA-CTCAAAGGTTTATGGGTATACTGTAAGCACACAGAAAAACAGAAGGAATTGGAACCAGGATGTTAATAAGGTTTGATTGTGGAGGGGAAAAAAAAAAAGAGGAGACAGAGAGAGAGGAGAAATATAATAATGTCTTGAATTTGAATAACATGTTAGCTAACAGCAATGGAAAGAAACATCAATTCAGAGGGAA-GGAAAGTGGCCAAAATTGCATTACTGAATATGAATCATAAAATAGCTAGAGAGC ...xx..x.::..:...x::.x:.x.....-.x::....:.xx...x.:...:x....x:x..x..x.x-:.:..x..:.x....:....x.xx.x.....:......:x---------------:...x..:.:.......---------.:...........:..........................x.....:--..........:......:.x:...-.......:..:.....::.....:xx.:..xx.....:.:...x...:::.::. 30M1D38M1I40M15I17M9I47M2I24M1D54M 179/250 71.6% 277/94230402 0.0% 29/250 11.6% 35807407 NA +40638 chr4 + 190214555 96637894 96637893 96638550 657 AGGAGAGGACAGGATTGGAAATGTGTATTAGTGTCATCTATTCACTT-ACCCAATCC-----ATAGTAAATATTCATGTAGAGTCAACTGCAGGAGTGGGGAGGGGGAAAGAATTGAAATCTAATGAAAGTTAATCAAAGAGAAGAACTTCCTTCAGGCTGGCCATGCATGTCTGTGGTTTGTCTGTCATTTATAATGCTGCAGCCTCTGGTTCATAGTCAAGCTGTAATTCTGCCAGTTAATGTATCCAATTAACCCCACTAATGAGCTAATCAACAGTGTAAAATCTGTGTAAAATCACTGAGGGTGTATGATGAATGGGAAATGCACTGAACTCTCCTAATATAAAAAGTGCTTTACTGCACTTGTTAAAGTGGCACTGTCTTATCCCTCTCTAAAGGGTAATTTATCACCAGGGTCCGTAAAAGTGCCATGCCCTGATAAGGCAGAGGTGGCAATAAACCCATCAGAAAATGATTACTCAGGAATGTGGAGCAATTACAATGTCTCCCTGTATCAGAGTCATAGCCTGGAGAGCAAATGTGCTTTTCTGTTGATTCAGGGTTCAAACAAAGAACCAGCAGTAAACTTGAAGGTGATCCATAACTTGTAAACGGATGATATTTTATATGCATGTATATTCATTTGA--------AATCTTCTGAAGCA chr4 + 94230402 60824037 60824036 60824702 60824037 60824036 60824702 666 AAGAGAGACAGACACAGAAAATGCAGCTTCATGTAATCTCTCCCCCCCATTCAGTTCGTGCTATAGTAAATATTCAGGCAGAGTCAATTATAGAAGTAGAA---GGGAAAGAACTAAAACCTAATGAAAGTTAATCAAAGAGAAGAACTTCCTTCAGGCTCCCCATGCATGTCTGTAGTTTGTCTGTCATTTATAATGCTGCAGCCTCTGGTTCATAGTCAAGCTGTAATTCTGCCAGTTAATGTATCCAATTAACCCCACTAATGAGCTAATCAACAGTGTAAAATCTGTGTAAAATCACTGAGGGTGTATGATGAATGGGAAATGCACTGAACTCTCCTGGTATAAAAAGTGCTTTATTGCACTTGTTAAAGTGGCACTGTCTTCTCCCTCTCTAAAGGGTAATTTATCACTAGGGTCTGTAACAGTGCCATACCCTGATAAGGGAGAGGTGGCAATAAAGCCATCATAAAATGATTACTCAGGAATGCAGAGCAATTAAAGTGTCTCTGCATATCAGGCTCATAGACTAGAAAGCAAAAGTGGTATTTT-TTGGTGTAGGATGTTGATAAAGGACAAGACAT-TGCTTGAAGGTGATCCACAGCTTGAGAAGCAAATACCTTTCTAATATAAATATTTCAGTTTAGAGGTAAATAATCTACTGAACCA .:.....:xx::x.:x.:.....::xx..x:...x....x.:.x.::-.::..:.:.-----..............x.:........:.::..:...:.::---.........:.:...:........................................xx..............:....................................................................................................................................................................::................:..........................x..........................:......:....x........:...........x...............x......x....................::.........x.:......:x::......:x......x..:..:......x...x.x..:.-...:.x:...:.x:x:.:....:..x..xx:.-x:...............:.:....x:..xx:.xx.:x...:xx..::.x:...x.:x:...::--------.....x.....x.. 47M1I9M5I39M3D448M1D32M1D63M8I14M 541/652 83.0% 666/94230402 0.0% 19/652 2.9% 35813857 NA +3603 chr4 + 190214555 96648248 96648247 96648474 227 GGCCAGGCATGGTGGCTCATGCTTGTAATCACAGCAGTAAGGGAGGCCAAG---GTGCGTGAATCGCTTGAACCCAGGAGTTCAAGAGCAGCCTGGGCACCATAGCGAG----ACTGATAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGGAAAGA chr4 + 94230402 2498433 2498432 2498657 2498433 2498432 2498657 225 GGCAGGGAGGGGGGGCTCGTGTCCCCAAGCAGTG-AGTGAGGGGGGTGAGGCGGGTGCGGGGATGGATGTA--TTAAGAGATGGAGAA------GGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ...x:..x:x..x.....:..:::x:..x..xx.-...:....:..:x.:.---.....x.:..x.x.xx.--::.:...x.x:...:------...x..x..:.x...----:x..::.:x..:x:x.:..:.x.:::..x..x...x:xx..::x...::..:.::..x.:....:.xxxxx....::......:...:::...:.....x..:.x......:..x..:.:. 34M1D16M3I17M2D15M6D15M4I121M 129/218 59.2% 225/94230402 0.0% 16/218 7.3% 94149815 NA +3877 chr4 + 190214555 96648336 96648335 96648531 196 CCTGGGCACCATAGCGAGACTGATAAGAAAGAAAAGAAAAGAA-AAGAAAGAAAGAAAGA--AGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-GAAGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAAGAATTAGGAGAAAAAATTATGAAAAATAAA chr4 + 94230402 49044630 49044629 49044827 49044630 49044629 49044827 198 CTTAGGTAATATTGAATTACCTAAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAA-GCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA .:.:..:.x:..x.x:xx..:x.x....xx:..:.........-....:.xx.:.::x.:--.......x.::x..x:....:x.--...x:......---.:....:xx..........::..:.-...:..x.:...:......:...x...-.x..:...xx:...xx..:.xx...::...x:.x:.xx..:x..... 43M1I16M2I23M2I11M3D25M1I27M1D47M 124/192 64.6% 198/94230402 0.0% 10/192 5.2% 47603706 NA +3049 chr4 + 190214555 96648387 96648386 96648461 75 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x::.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 55536209 NA +3070 chr4 + 190214555 96667352 96667351 96667422 71 AAGGAAAAAAAAAAAAACAAAAACAAACAAACAAAAAGACTGCACATTTCAGAATTATGCAATGGAATATA chr4 + 94230402 76904550 76904549 76904620 76904550 76904549 76904620 71 AATGACAAAAAAAAAAAAAACAACAAACAGACAAAAAAACCATTAATTTTATCCAAATGCACTGAAATACA ..x..x...........x..x........:.......:..:::xx....:.xxxxx.....x..:....:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 19762802 NA +3013 chr4 + 190214555 96668251 96668250 96668301 51 AGAAATCAATACAAACATATATATATATATGTGTGTATGTGTGTGTGTGTG chr4 + 94230402 6857606 6857605 6857656 6857606 6857605 6857656 51 AGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ......xx....:x.....::....x..:.......x...........x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 89810645 NA +3359 chr4 + 190214555 96673129 96673128 96673191 63 ATATGTGTTTATAGATACACATACATATATACATTTATATATATATATGTGTGTATATATAAA chr4 + 94230402 63788529 63788528 63788591 63788529 63788528 63788591 63 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATAAA ....:.::...x.:x..xx...............xx.:.x.....:x................ 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 32884600 NA +3684 chr4 + 190214555 96678322 96678321 96678400 79 GTGGTGGGCACCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.x...........::........x.xx.x...x.x...........:..x.xx:..:..:.. 6M2D71M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 20645121 NA +3133 chr4 + 190214555 96680929 96680928 96681021 93 GATAATTTGGGTTTCTCTGTGCGTATGTATGTATGTGTGTGTGTACGTATGTGTGTGTATGTTTGCAAGCACATAAA-----ACATCAATGTGGAGTT chr4 + 94230402 39937158 39937157 39937251 39937158 39937157 39937251 94 GATAATTTGGGTTTTGCTATATATATGTGTGTACGTGGGTGTGTAC---TGT-TTTACATACTACCATACACATACATATATACATAGATGTGCATTT ..............:x..:.:::.....:....:...x........---...-.x.::..::.xx..x:......x.-----....x:.....x.x.. 46M3D3M1D24M5I16M 66/89 74.2% 94/94230402 0.0% 9/89 10.1% 56743771 NA +3050 chr4 + 190214555 96686117 96686116 96686188 72 CCCAGCCTGGTGACAGAGTGAGACTGTGTCTCTCAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAGAAAAAGC chr4 + 94230402 58911790 58911789 58911861 58911790 58911789 58911861 72 CCTACTCTTACTACAGGTTGAGCCTTTGGTTTTGAAAAACACAACAGAAGAAAAAGAAAAAAAAGAAAAAGC ..:.x:..x::x....:x....x..x..x:.:.x.....x.x.:x.:........:..:............. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 37774327 NA +3042 chr4 + 190214555 96686140 96686139 96686209 70 CTGTGTCTCTCAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAGAAAAAGCTCCTAATGAACAATGCACAAT chr4 + 94230402 82272399 82272398 82272468 82272399 82272398 82272468 70 CTGAATATTTAGAAAAACTAGGAAAAAAAAAAAAAGAAAAGAAAAACACTAATATTAAAGATTGCACAAT ...x:.x.:.x:.....xx..:....:.............::....x:..xx..x.:..x.x........ 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 14413741 NA +3068 chr4 + 190214555 96721434 96721433 96721485 52 TTTGTTGATGTTGTTGTTGTTGTTTTCCATTTGTTTGTTTTTCTTTTTATAG chr4 + 94230402 35905417 35905416 35905468 35905417 35905416 35905468 52 TTTTATGCTTTTGTTGTTGTTGTTTCTCATTTGTTTTTTTTTTTTTCTTTAG ...xx..x.x...............::.........x.....:...:.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 60816017 NA +3356 chr4 + 190214555 96723169 96723168 96723251 83 AATTTGTGTTGCACAGCATTCAAAGCTGTCCTGGGCCACATGCGGCCTGCAGACCACAGGTTGGACAAGCTTATTGTAAGTCT chr4 + 94230402 45575675 45575674 45575755 45575675 45575674 45575755 81 aatttaggttGCCAA--ATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGCAGTAGTCCT .....:x.....xx.--...xx.......x.......x....:..:...::..:..::.......:.x..:.::x...:x:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 51147494 NA +16979 chr4 + 190214555 96755604 96755603 96756776 1173 TTTCATGAAAGATTAATGCAAGCATAGAAAATTCAACGTTTTTATATGGAGAACTAGATCCTATACATGTTA-CTAGTTATGTGGTTGAGCTCCTTGACCTATTTATCATTTTGAAAGAAACTGAAATGACTCTGTCAGG-TGTAGAATGTGCCCAGATCAACACAATGCTCAGCCCCTGTGCTGTGATGAAGAGCAATATATTTAAGCATCTAATATTTATATTCACTTCAACTTGTTTGTTCATTTTTCATTGTGAGTGCCCATAGAGATGAAAGAAATTAGTTTCATTATTGATGACTTCTAAATACAGACAAGCTTAG-----------GGAGGAATGAAATCAGACAGTGTTTGGTATTCCAAACTGA-ATGCT--------ACATCCAGGCAGTGCCTGTTAAAGAAGGCTAATTAAAATGGTGCTTTCA----ATGATGCACTTACAAATCACCTTCTTTAA---TCTGTCATTTA--CATACACATATGTACATCAAA--------------------------CTGTCCTTATTAAAGAGGTAACAGAAGAAAAATCAAATAG---GTAATTTTGA----CTGATATCACCTTTGTCTT-----------------TTGCTTTCACAAACACATAAAAGGGTTGAACAGCAG-ATTTCTTTCAG------GTGAAGGCCTGAAATCTTCACATATGACTCAGCTTGCT-----ACTCTAATGTCTATTCATTAATCTGTAGTGCTTTCTTGGGAGA---------TAAGAAGCT----TCTAAATGAAAATAATGA-ATGTTCTTCCTTCCGAGCATTTCCTCAGTAATTCATATTGTCCTGACATATATACAGAGTTCCTTCCCTGAGTTACCTTTGTGACCCCTGTTT----AAGAGTGGAA-TAAAATGAGAAAAGGTTCAAGTTTAAAATATTCCTACAAGAAA---ATTAACTCTAAACACGTCTGTCAATACCTAATAAAA--------------------------GAATAATTTAATACAAAAGAATTCCTAGCAATG-CTAAT----------CAACTTCCTGAAAATCATCAGGGTAGGACAATCATTTGCCCTATATTATTATTCTGCCCTTTTTGCAACAGAGCCCCTAAAAGTAAATAATGTGACATTTTCTTCTCAAAAATAATCTTTTTGACCATTTCCATGAAATATACATTAAGTTGTTTTAAAAGTCACCACTAATACCCTTGCCCTTTAGACCTCTGCTTGCAGAGATAATGAGTTAGAGTTTGCTGAACATTTCATCTCTGTTTCAGCCTCTTGCA chr4 + 94230402 60873049 60873048 60874313 60873049 60873048 60874313 1265 TTTCCAGAAAGGTTGATACA-GCAAAAAAAACCCTACAGTTTCAC--TGAGATTTGTACCCTATACATGTTAACTGATTATGTAGTTGAACTCTGTGAGTTATTTATCATCCTGAAAGAAACAGAAATGACTGTCACAAGCTGGAGAATATATGCGGGGCTTCACAATGCTCAGTCCCTACTGCATTCTGAACAGTGATATATTTTGGCATCTAATATTTATATTCATTTCAACTTGTATTCTCATTTTTCATCTGCTGTGCCCTTGATGATGATAAAAATTAACTTTATTATGGCTTCCTTTAAAGGACATCCAGGTTCAGAGGAAAAACTAGGAGGGGAGAAGTCATCCAGAGGCATGGGCTCAAAATTGGTATGTCAGGGAAGGATATCCATGAATTTCCTGTTGACATATAGTGATCCACAGTCCTCTCTCGTATTATTATACACTTATAAATTACCTTCTTTTATGGTGTGTCGTTTAACTATAAGGGTCTTTGTATCAAAACTAGTGTTTCAAGCCCAGGCAGAAGCCGTCAGTGCTGTGGAGGTCACC-CTGAAAAACAAAATGGATAGCAGTTTTGACAAGCAAAGACCTCCTTTGCATCAGACCCAGGTGGGGATGTGGCTGCTGCGAGACCATGGCAAGTCCTCGTGGCAGCATTTGTTCCCGTTATGTGGGACGGGCTGACACTGCTATCTGTCACTCACCATGCTGCGCAGCTTTTGTGTTTATGT-TGCACCTCTTTTTTTTTTTTGAGATGGCCTCCCTCTAGGCTGCTGTAGTTTAAATCTTAGCAGTCAGGTGCTATT-----------TTTCCTATGTCTCGCCTGTCAGCCTGG-ATCTTTGTCAAG---CCTCCAGCAGGCCCTTTTCTCCTCCTCACTTCCAGAAGGGAGGCATTTAAGTAAGCCAACTTTCAAT---------CTCTGACAGGAAACAGATAAAATAATAAAGCATCCTTCCACACCGCATGAAACTGTGGTAAAAGTGTAGCGAAGGAAGGAGTAATTACAGGGAGAAAAGTGTTCTGCATTGCCTAATCTTCAACATCCAACTTGCTAAAAA---------------AATCACTGAAATTGTACCATAGCTGCAGTATTTTTGTTAGACTGGCCCT-------AATTATCTGATGCTTATTTGGTCAAA---------TTGACAAAATATATTAGATATATATGAAAACATTTTGCAATATACCGATAATAACCTTGCCCTTTAGACCCATGGTCGCAGAGATAATGACTCAGGGTTTGCTAAACATTTCACTCGTGTTTCAAACTTCTGCA ....xx.....:..:..:..-...x.:....::.x..:x...:.:--x....x:.:x.:.............-..::......:.....:...:x...x:..........::..........x.........x.xx..:.-..x.....:.::x.:.:x.xx............:....::xx::.xx....x..::........x:....................:..........x.x:...........:xxxx......x.::x.....x.:......::..:.....x.x.xx...:x..:x...xx..:.:.:..-----------.....::x...:...xx...x.x:xx.x::..x...:..:-...::--------.:.....x.x.x.x......:.x:x.x:x.:..:x.x.xxx:x..:..:----..x..:......:....:.........x.---.x....:....--:...x:x:.x.x.::......--------------------------.:...xx.::.:x:.....x..x-xx......:x....:.---.:.:......----.x:.x.:.x......:x.:-----------------.x...x:::.:.:xx...::x.:.x::xx:::....-....x..:.x.------.x..x..x....x.::x::.:x.:.x.....x.x....-----:..:.x:...:...x:-.xx.:..x.xx.x:...:...:..x:---------..:.xx...----.:.....xxx.::.:.x.-:..:.x..-----------......xx..xx:x.x.:.::x....:-..x.x.::x:..---.:...xxx..x:x.:...x.xx:..::::..----...:.x..x.-.x..:.:..xx..xx.....x---------:..:x...:....---..x..x.xxx..x:.:..:x..x.:...xx..:...--------------------------..:.....xx.x:x.:..:.:.x:::x...x..-.....----------......x..:....---------------.....:.x:xx:.:..::..x::.x::x:x......:x.x.xx.x....-------...x..x...:::..x:..xx:x...---------.....x.xx.x:..x.:.....:..x..:x::....:x..xx:...:x.....x................:x..x.:.............x.:..:.......:.........:::x.......:x..::.... 20M1D24M2D25M1I67M1I181M11I40M1I5M8I49M4I29M3I11M2I21M26I23M1D16M3I10M4I19M17I36M1I11M6I38M5I16M1D26M9I9M4I18M1I8M11D27M1D12M3D31M4I10M1I21M9D13M3I36M26I33M1I5M10I14M15D49M7D26M9D134M 715/1113 64.2% 1265/94230402 0.0% 212/1113 19.0% 35882555 NA +10398 chr4 + 190214555 96776828 96776827 96777345 518 AATGCAGAAGCTATATAATTAATGTTGAGGAGAAA-CAGCTTAGAATAAGGCTGACACTAGCATGAGGCAAAGTTGGATGAAGACATATTTCACATCCAGAGGGTTCAAAACAGAGAATATATCTACTTCTGGGGCATGGATAAGAATGCAAATAAAACCACTGAACCAAAATCCTGGCAGTTAGAGAAATACTCTGGAAGATACAGATGTCAGTTTGGACAGTAATGGTGATTAGTGTGATTTGGTAATTGAAAAGAGGCAGCAAAGGCGGAATCTGAAATCTTCTACATTCAGGTCCAGTGATACATTGTTATTTGACTCAATTAACTTAAATTACTAAGATATAACTGAATAAGTTATGTCATTAATTATGACTCATCCAAGCACATGCTGTTTAGCAAGGAAATTTTGAGTTTTGTAGGCTATAAATTAAGAGTTAATGGGAGTCTGTAAACAACATTTGATTTCAGGAACACAGCGTTCTGTTTTCTTAAAGAAGACTAATGACTTAAAATGGC chr4 + 94230402 60877902 60877901 60878355 60877902 60877901 60878355 454 aatGCAAGAGAGCTATAACTAATACAAGAAAGAGAGAAGTATGGAAT--GGCGAACAAAAACAGTATGAATAATGGGAATAAGGCAT------------GAATGTAGAAAATAGATACTCTATCTA-------------------------AATAAATCCTTTGAAATGAGA-ACTGGGAATAAGATAAATACT--GCCATGCACTGATGTCTGTTTTGACAGTAATAGTGATTAGTGTGAGTTGATAATTAACAACAAGGAGCTACAGCCAGAGCAGAAACTGTCTTCACCAAAGTC--GTGTGACACTATTACTTAACTCAATTAGTTCAAATTACAGACATGTAGCTGAATAAGCAATATTATGAACTGTGACTCACATAAGCAT-TTCACTCTGGGAAAGTAATTCAGAATCTACTAAG-TAGAAGCTAATAGCAAGTAGGAGAACATGCACAATTTATGACT-------------------TTCATTTAAAGGGGACTGCTTACCCCAAATAAC ......::..xxx.....:....::x::::...:.-x..:x.:....--...x:...xx.:..xx.x.x.x.:.x...xx...:...------------..:x..xx....:...x.x.x......-------------------------......x..x:....x::.:.-x....x.:.x...x.......--.xx.x::..x......x....x.........:.............x...:.....:.x..x.:.x...x.x:..x::.x.x....::x...x..::x.:...--...xx...:.:...:..:.........::.:.......x:.x..:..:.........:x..:.:..x..:.:.......:x:.....:-.x.xx.:.:.x..:.x....:x..:.:.xx..:.-..x..::...x..:x.:.:....xx::.:x....:x.x...:.-------------------..:x:......::....:x.x..::x....::. 35M1I11M2D38M12D27M25D21M1D21M2D102M2D88M1D34M1D43M19D33M 297/453 65.6% 454/94230402 0.0% 66/453 14.6% 35898926 NA +3042 chr4 + 190214555 96817018 96817017 96817079 62 TGTTTTTGTCATTTTACTTTTTCTGTTTTTTTTTTTGTTTTTTTTTTGTTTGTTTTTGTTTT chr4 + 94230402 92916278 92916277 92916339 92916278 92916277 92916339 62 TATTTTTGTGGTGTTCTTTTTTTAGTGTTTTCACTCTCTTTTTGTTTGTTTGTTTTTGTTTT .:.......x:.x..x:.....:x..x....:x:.:x:.....x.................. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 3900740 NA +3128 chr4 + 190214555 96817032 96817031 96817085 54 TACTTTTTCTGTTTTTTTTTTTGTTTTTTTTTTGTTTGTTTTTGTTTTTTTAAT chr4 + 94230402 37306816 37306815 37306869 37306816 37306815 37306869 54 TACCTTCTCTGCGTTTTTTTTTGTCTTTTTGTTGTTGTTGTTTGTTTTGTTAGT ...:..:....:x...........:.....x.....xx.x........x...:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 59510216 NA +3029 chr4 + 190214555 96824234 96824233 96824278 45 CATATTTTGTTTTTTTGTTCGTTTGTTTGGTTGGTTGGTTGGTTT chr4 + 94230402 31166929 31166928 31166973 31166929 31166928 31166973 45 CAAATTTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTT ..x.....x..........:.....x..............xx... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 65657305 NA +3076 chr4 + 190214555 96824243 96824242 96824282 40 TTTTTTTGTTCGTTTGTTTGGTTGGTTGGTTGGTTTGCTT chr4 + 94230402 31166934 31166933 31166973 31166934 31166933 31166973 40 TTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTT .......x..:.........................x:.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 65657309 NA +8831 chr4 + 190214555 96845918 96845917 96846244 327 TGACAAAATAAGCTCCAAAAAGGAAGACACTAAGCAAGCAATCTGCTGTCATTAATGTGAGAGCTGTCAGGAATGTAGCTTATAATAACAGGAACAGATAGCGCTTTTTTCAAAGCCTGAACTTAAAGCTTCAACAGTAAGCAGGGAAATGACATTTACATTGAGATGTAAATTGCA-GCCAATGGCACTGTTCATTTATGTAAGATGGGTCTATTTTGGTTTTCGG-AAATATAAACTGAAACCCTGTGTTTTCTCTTAGAAAG-GCTGACTGCATAGAAAGTAAAACTTAAGCCTA---TTCCTGACATGTCAGGAAAATGTAAAGGCCTT chr4 + 94230402 60897602 60897601 60897915 60897602 60897601 60897915 314 TGAGAAAACAAAC---AAACAAATGAGCACACAGCAAGCAATCTGCTGCAATTAATATGAGAGCTGTCAGGAGGGTATATCTTAATAAGATCAACTGACGATGC--TGTTCCAGGGCTGAACTTAAGGTTTCAGCTCCACAGAGGAAAATGACATTTATAGTGAT-TATCAATTCCATTTCAATGACAGCCTTCATTTAGGAAAGATGAGTTTATTTATTTTGTAGATAGATGAAAAATAAAACC---TGTTTTTTCCTCGAAGGAGCTAGCT----------CAAGACTTTAAATTATGGTGGCTGAAATATTAGGGAAAAATAGAAAGCTT ...x....:..:.---...x.::x:::...xx................:x......:...............:x...xx.:x......x.xx...x..::::..--.x...x.:.x..........:.:....:.xx:.x:x...:............:.x...x-.:.x....x..-x:.....:..x:x........x.x......:..:.....xxx..x.x.:-.:..:x...x.:.....---......:..:.x...:.-...::..----------:..:....x.:x:..---.xx....x..:.:...:...x:..:.::x... 13M3D88M2D59M1D11M1I49M1I17M3D17M1I7M10D15M3I32M 214/308 69.5% 314/94230402 0.0% 25/308 8.1% 35948316 NA +3356 chr4 + 190214555 96892817 96892816 96892891 75 GCCATATTTTACTTTTTTTCTTTCTTTTTT--TTTTTTTTTTTTTTTTAAGAGA------TGGGGGGGTCTCATTATGTCACT chr4 + 94230402 14401519 14401518 14401601 14401519 14401518 14401601 83 GCCATAATCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTTAAGAGAGCTCTTTATAGAGTTATCACTATACTACT ......x.::..........:::.:.....--.....:................------.:x:.:.x.x...:...:::... 30M2I22M6I23M 57/75 76.0% 83/94230402 0.0% 8/75 10.7% 82491298 NA +3040 chr4 + 190214555 96912156 96912155 96912254 99 AACAATAGTAAATATTTACAGAAGAAAGGAAATAAATACAGAAGAGAAGAAGAAAGAAAGAAAAAGAAAGAGGATGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 41404431 41404430 41404529 41404431 41404430 41404529 99 AATAAAGCTAAAGCTTGTCATAAACAAAGAAAAAAATAAAAGGAACAAGAAGAAAGGTAGAAAAAGCACTGAGGTAAGAGGAGATAAGCATAAAAGGAA ..:..x:x....xx..xx..x..:x..:....x.....x.::::.x..........:x........x.xx::.:.:::....::x...x.x::...... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 55507725 NA +3071 chr4 + 190214555 96937987 96937986 96938038 52 TCTGTGTATCTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA chr4 + 94230402 60813647 60813646 60813698 60813647 60813646 60813698 52 TCTGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGTA .......x..x......x.x.........:.........x..x.x:..:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 36124340 NA +3338 chr4 + 190214555 96963643 96963642 96963694 52 AAGGGAAAAAAATGCATTTCTACTATCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 49706466 49706465 49706517 49706466 49706465 49706517 52 AAGGAAAAAAAATGCATTTTAACTTGCTTGCTTTTTTTTTCTTTTTTTTTTT ....:..............:x...xx..:x:.........:........... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 47257177 NA +25350 chr4 + 190214555 96995784 96995783 96996270 487 ACAAATGTTAGTTATCCTTTCTGTCTTTGTATGTGAAGCTCAGATGTATTATATCATTGTACAAAACTGCATATGAAATCAATACACTCGAGGAAAATGGCTATAAAACCACAATTCTTTAAGTCAAGGGAAAGTAAATTGCTTGTGCTACCCAGATAGTTTGGGATTTGTTGCCTGTTTCTACAAGAGAGATTTTCTTTCCAATAACTTCTGGCTCAAGAATTACAGTTAGTAACCATCAGCCTAAAAGTCTGATGCATTAATCTTTATATATGTTCCTTTCCATTGTATCTTACTTTATTTATGGAAATCATTTTGCTAGAGTAATACCAT-AGCTATACAACTTGTTTTCATGAGAAATTGAAATTTTAAAAAATAAATAAAAATAAAACTAGCGATGAAATACCCTTTGAAAAGTACCCTGAAGAAATTAC---TATTTATTGGGTTTGATAAATGTTTTTCGAATTTTCTAAGAGGTTAGAAGTTT chr4 + 94230402 60929514 60929513 60930000 60929514 60929513 60930000 487 ACAAGCATTAATTACTGTGTCCAT--TTGTGTGCTAAATCTATCTGTACTCTGTCTGAGGAGAAAATTGCATAAGAAATCAATAAGCTGAAGGAAAATGGCTATAAAAATACAGTTCTTTAAGTGGAAGGAAAGTAAATTGCCCATGTTGCTCAGGTAGTCTTGGATTTGTTGCCTGTTTCCATATGAGAGATTTCCTTCCCAGTAACTTAAGACTCAGAAATTATTGTTAGTCAGTGTAAGCCTAAAAGTCTGATGCATTAATCTTTATACACGTTCCTTTCTATTGCCTCTTGCTTTATTTATGGAAATCATTTTGCTAGAGTAATACCATAAGCTATACAACTTGTTTTCATGAGGAGCTGAAGTTTTAAAAAATAGCTCAAAATAAAAATAGACATGAAATATAATTTGAAAAGCATCGCCTAACAATTACAAATATTTATTACTTGTAGTAAATATTGCCCTGGTTTCTATGTAGGT--GAAGCTT ....:::...:...::x.x..::.--....:..:x..::::.xx....:.x.:..xxx.x.x....:......x..........x:..x:..................x:...:..........x:.:..............:::..:.:.:...:....:.x..................:.:.x.........:...:...:......xx.:....::.....:x......x.x::.x...............................:.:.........:....:x....:......................................-........................:.::....:............:x.x.........x...xx........:xx.........:.:.x:xx.:x......---........:xx.x.::.....:..x::.x::...::xx:x....--....:.. 24M2D307M1I101M3I44M2D7M 370/483 76.6% 487/94230402 0.0% 8/483 1.7% 36066270 NA +39634 chr4 + 190214555 97027701 97027700 97028483 783 AAAACATGAAAAACAA---AATGCACTTTGAGACTCTCTTGGTCTTCATGGGAAGGCCACCCTCACAAGTCACTTCCTATTGTGA-----CAAAAGGGAGCATCCTCTCTGTACATTTGCATCTATTTCATGTTCTCTCTTTTTTTTTTTTTTTAGAGTAATGTGATTTAGCACTGGTGCCTGCTGGATAGAAAGAGTC-TGATTAATGTGTGGCACTTCGTGTTATAGCATATACACCCATGTAAGTGATGGAAGACCCTCACATAATTGGATATGAAATTGAATAAAATGATGAAAAATTCAGCATAACCTTTGTCTTTATATGCTGCAGTGGGGAAAACCAAGAGGTCAGGATACTTGGAAACGATGAGGGGCATTTTATAGTCTCTGCTGGTAAAAATTTGTTTAACACAGTCCCATGATTAAAAGGAATGTG-TATCCTGCTGTGGCACCAAGGTACAAGAGAGAGAATAATAAATTGATGCCATTGACAAGATGTCATTTGTTATCTGCTTTAAAATGTCAGGTCATGTCATTGTGGTGAAATATTTTCTCTCTTGATGTATGTCTTACAAAGCAGGTTCAATGTTTGGCCCTATTCTATTTCAATAAAAGAAAACAGCTTTTAATCTGAAAAGCACTGTCACCAGGAGGAAAATAAGGTC-ATTTGAGACTCTTATTTAGCCATTTCTCCACAACCCTCCATTAGCAGTATATTTC-AGTCACCCAGTTGGTC-CAAATTCTTTCTTTAATTTATCTTTTGAGGGGTGTAATTATCCATCTGCTCTCTT chr4 + 94230402 60940501 60940500 60941288 60940501 60940500 60941288 788 AAAATATGTACAACAACTTGATGCATTTCCAGGCCTTTGGAGGTTTCGTTGGAAGGCTACCCACTCTAATGATTTCCTGTTGTAATTGCACAAAAAGGAGTTTCCTCCTTATTCATTTGCATCT--TTCTTGTCCCACTTTTTTTTTTTTTTTCAG--TGAGATGATTTAGCACTAGTGTCCACTGAACAAAAAAAATCCTGATTAATGTGCAGCAGCTGACATTATAGCATATACATTCATGCAAGTGATGGAAGAGCCTCACGTAATTGCATAAGAAATTGAATAAAATGATGAAAAATTTAACACGGTCTTTGTCTTTACACATTACATTGGG-ATGGTTGGGAGGTCAGGG-AGTGGGAAACACCTAGGGGTATTTTATATTCTTTTCTGGTAAAAATTTGTTTAACATAGGTCCATGATTAAAAAGAACATGGTACCCCACTGCGACATGGAGGTACAAGAGAGGGAATAATAAATTGGTGGCATTGACAAGGTGTCATTTATTATCTGCTTTAAAACGTCAGGTCATGTCATTGCAGTGAAATATTTTCTCTCTTGATGTATGTCTTACAAAGCAAGTTCAATGTTTGGCACTTTTTGATTTCAATAAAAGAAAACAGCTTTTAATCTGGAAAGCACAGTAACCAACAGGAAAATAAGGTCAATTCAAGGCTCCTATTTGAACAATTTTTCACAAGCTTCTCAAAAAAGCCTATTTTAAGTGGTCTAGTTCATCACAGAGCCTT--GTTCGTTCATCCTCACAGAGCCCTGGCTGACACTCTGCCCTTTT ....:...x.x.....---:.....:..:x..:.::.:xx:.x:...:.x.......:....x.x.x.:.x.:.....:....:.-----.....:....:x.....::.:.x...........--...x...:.:x::..............:..--.:.x:............:...:.::...:.:.:...:.:..-...........::...x:.x:::..............::....:.............x......:......x...x..........................:.:..::::...........:.:::.:..x....-.x::::::.........:-.x.x......:x:x.....:........x...:.x.....................:..x:............:...::..-..:..::...:.:..:x:.............:.............:..x..........:........:...............:.................::.......................................:..............x..x..:x...............................:.......x..x....:x..............-...::..:...:.....::x..x..:.:.....x.:..:xxx.:x..:x.....:-...x::.:....x:..-..:.x:...--x..x:..:...:.:xx..:.x:x.:::.:x.xx.....:..:.. 16M3I66M5I34M2D30M2D41M1I136M1D18M1D81M1I229M1I55M1I16M1I9M2D44M 594/775 76.6% 788/94230402 0.0% 21/775 2.7% 36087200 NA +7314 chr4 + 190214555 97086125 97086124 97086680 556 GGATATGATGATAAGACAATAGGAATTAACCCAAATATCTACCTATAAAGCCGAATATTTTTCATTTTATTAGCAAGTAAATCTTACTAATGGAATACATTTAGTCTTCTAAACATGCCAGGCTATTTAGTTCCATTTATAAGATTGCAATGAGAGTTAATGAGGAAGCATAATTATCTGA---TGCATGT---TTATATTCTCTTCCTCTCATTTTTATTTTTAGCTCCTTCATGTCTTATTTTTTAAGATGGA-----TGCTATTCTGCTTAACTCTTCTATTT----TATTATAAACCAAATATGCCATAAATAAGCATGTTATACAAGAATAA-TTGTTTA------TTCTTCTCTCTGAACCATTCAACTTCCTTCTGTG---------------------ACA------------GGCAGCAG-----------------------------------------------AGTCAAGCAAAT---------GAATGTTGAGAGGCACTATGTATTCATCAG-ACAAACA--CACATTAAGGCTGGATATTA----TAAACTAGAAACTGTATTAACATTTTGGTCATTAAATCTGCTTAATTAAATTTAATTGTGTTTTCCCTTACGTTATAGCAATTGC---ACACTAAC----CATATTGTCTTTCCTGTCCT chr4 + 94230402 60959915 60959914 60960560 60959915 60959914 60960560 646 gaatttaataaaaaaataaCATAGATTA---TGATAGGCTACCTAGAAGCAAGAATGCATTG-ATTTTCTTAGTAGGTATATCCTGC---------------------CTTACCATGTCAGCATGTT-AATACAATTTGCAGAATT-CAGTAAGAGTTCATGAG-AACAATAATTATTTGAGAGTGAATTTGCTTTGGGCCTTATTATTTTCCTTATAATTTTGAGCTTCTTTGTTTTAGATTCTGCCAAATGTTAAACTCACTACATTGCCAAGTAATTGAATTTCTCTTATTACACAC-ACACACACCACAAA-GAGCATGCTGTCCAGACAGAACTTATATAATGCTCTTCTCCTCACTGGATCGTTCAAACTCTTTTTGTGGAGATGACTAAAAACCTGATTACATTAATGAAACTCGGTAGAAGGTCCACAGATGTTGATAAGTATTCTTCATTTTAAGGGGGGTTTCTGCAATCAAGATAATTTGCAGACTAAAGGCTCATAGCAGCCCTGAATTAATTAGTAAAAATAATCACATTAAGGCTTGAACTTAATAATAAACTGGAAA-GGCATTAACATTTTGGTCATTAAACCTGTTTAATTAAATTTAATCGAG----CTCTCACATTATTACAGTTACAATACACTAACTAAACACATTGTCTTGCCCCTCTT .:..x.:..:.x..:.:..:.x::....---::.xx:x.......x..:xxx....::x..x-.....x....:.:...x...:.:.---------------------..x.x....:...xx.:..-.:.x.x....::.::...-..:.:......x.....-..xx........:...---..x..x.---..:x::::.x..x:.:..x..x.x.....x....:...::.x.:xx...:.x:x.:...xx-----::...:x:...:x.::xx..xx....----.....:.x..-.x.:.::...:...-:......:.:.x..::x.x..-..:.x..------....:...x...:.:.:.....x:..:..:....---------------------...------------..:..x..-----------------------------------------------.:.....xx...---------:..x.:.x.x..xx:.:x..x...x..:..-.x...:.--............x..xx...----......:....-x.:.....................:...:...............:.x.----.:..:..:....x:..:..:.---........----..:........x..:x..:. 28M3D31M1D24M21D19M1D18M1D17M1D16M3I7M3I61M5I26M4I10M1D14M1D21M1I7M6I34M21I3M12I8M47I12M9I30M1I7M2I20M4I11M1D48M4D21M3I8M4I20M 359/521 68.9% 646/94230402 0.0% 160/521 30.7% 36126210 NA +4920 chr4 + 190214555 97098816 97098815 97099095 280 GCTTTTGCAACTGCTGTTCCAGGGAGAGATTCATTCTTTCCACTATTGCTTGTCCTTGAGAATTATATGGGATACTAATAATGTGTTTAGTATCCCATACAGAGAAAAATGTAGCTAGAGCTTGGCTAGTATAGCCTGGGGCATTATCTTTTTTGATATAAGCTGGAATGCCCATCATCGCAAAACACTGCAAAAGGTGATGTTTAACACAGGCAGAAGACTCTCCTGATTGGCATGTATACCAGACAAAGTGAGAAAAGGGGCCCACACATACATGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ....:.x...x.:.:x..::.:x.xxxx...:::::x...:.....:.::..x...xx:.:xxx:.x::......:x:..x.......x::x:.....::xx:x.:...:x:xx.x..xx:x:.:.....:...x.....x....:...x....x..x.:x:x...x..:.....x.:......:..x::xxx:..:..x:x..:x...::x::..xxxx:.....x.:...:xxx..:xx...x.:...:...xx.x.x.x::.:.:.x.:..:..... 280M 153/280 54.6% 280/94230402 0.0% 0/280 0.0% 78033495 NA +25797 chr4 + 190214555 97105588 97105587 97106023 436 AATATATACAAAGAGAAAGAAAACCATGCAGCATCCTAGAATCTGGGCTTAAAATCAATTTGTGTTGAGAACAAAAATGTCTCCTTTATAAATACTTATAAAATAGGATTTCAGATTATATGTTCAGCATTGAATGATGTATATTATTCTTATTAATGTTTCATAAACATATGTATAAAAA-CAATATGCTTCACTTTGCTTCTAAGTATTAAGTAGAATTATTGCAGCATCTGCTTCCAATGGTTGAGTGCACAAGCTATTCATGCCTTGTCATAAATTCCATGATGCATTAAGATGTCATTAAATGTACCTTCTGTGGTTGTCTCCTAATTTACATACCTTGTAAATCATCAGGT-AAAAATCAAGAGAGCTGAGGAATAATCTCCTATGCTCTTCCCTTCTGCCAC-GAACTCAGTGCCATTCATAATCTTCATCC chr4 + 94230402 60962679 60962678 60963114 60962679 60962678 60963114 436 AGTATGACTAAGATGGGAAGAAATGACAGAGAATCTCAGAAGTGCTACTTGAAATCAATTTATACAGTGAACCCAAATGTTACCCTCATCAATATTTATAAAA--AGGTTTCACATTATATGGCCAGCATTGAATGGTGCATGTTATTCTTATTAATGTTTCATAAACATTTCTACAAAAAACAATATGCTTTACTTTGCTACTGAGTATTAAGTAGAATTATGGCAGCATCTGCTTCCAACAGTTGAGTGCACAAGCTATTCATGCCCTGTCGTAAATTCCATGATGCATTAAGATGCCATTAAAGGTACCTTCTGTGGCTGTCTCCTCATTTACATACCTTGTAAATCATCAGGTAAAAAATCAAGTGAACTGGGGAGTTATTTCCTGCATTCTTTCCTTCTGTCACAGAATCCAGTGCCA-TCTCCATCTTCCTCC .:...:xx:..::x.::.::...:x.::x..x...::....x:xxx:...:..........:.::x.x....xx......:x..:.:..x....:........--:.:.....x........x:............:..:..:...........................x.x..:.....-..........:........x..:..................x.................::.........................:....:........................:.......x.............:........x...........................-..........x..:...:...:.x..:....::::....:.......:...-...::........-..x:x......x... 103M2D76M1I175M1I51M1I13M1D15M 352/433 81.3% 436/94230402 0.0% 6/433 1.4% 36142909 NA +3026 chr4 + 190214555 97107361 97107360 97107428 68 TTTTTTTTTTTTTTTTTTTTTTTTTTGCTCAAAATACATACATTGGTCTTT-----GCAACAGGGACTTCTTG chr4 + 94230402 73010836 73010835 73010908 73010836 73010835 73010908 73 TTTTTTTTTCGTTTTTTTTTTTTTTCCTTAAAAGAACATATAATGGTCTTTTGAGGTTAGCAGATGTTTCTTG .........:x..............:x:.x...:x.....:.x........-----x:.:...:x::...... 51M5I17M 51/68 75.0% 73/94230402 0.0% 5/68 7.4% 24096525 NA +3026 chr4 + 190214555 97107361 97107360 97107428 68 TTTTTTTTTTTTTTTTTTTTTTTTTTGCTCAAAATACATACATTGGTCTTT-----GCAACAGGGACTTCTTG chr4 + 94230402 73006862 73006861 73006934 73006862 73006861 73006934 73 TTTTTTTTTCGTTTTTTTTTTTTTTCCTTAAAAGAACATATAATGGTCTTTTGAGGTTAGCAGATGTTTCTTG .........:x..............:x:.x...:x.....:.x........-----x:.:...:x::...... 51M5I17M 51/68 75.0% 73/94230402 0.0% 5/68 7.4% 24100499 NA +3080 chr4 + 190214555 97117126 97117125 97117172 47 ATATGTATATATATATATATATATTTTTTTTTTTTTTTTGAGAATTG chr4 + 94230402 24792626 24792625 24792672 24792626 24792625 24792672 47 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTG ....:..............x:.x......x.........x.:..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 72324500 NA +3121 chr4 + 190214555 97126970 97126969 97127035 66 TTAAAAAAAAACAGAAGATCTAAATAAACACAATCAGAAATGACAGAAAGAAAATCAATGCCACAG chr4 + 94230402 82165616 82165615 82165681 82165616 82165615 82165681 66 TTAATTACAGACTGAAGAACTATATAGAAACAGTTTGAAAAGACAGAATGAAAAGCAATGCCAAAG ....xx.x.:..x.....x...x...:.x...:.:x....x.......x.....x........x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 14961354 NA +27167 chr4 + 190214555 97142051 97142050 97142816 766 GGATTATGACTGTTTCAACTTTCGAAGCTTCTGAACACAGAACAGTTTAATAAGCTCAGTGATCTCTAAGAAACATTTGCCAGAAAGAAAACCTGCGGATCATGA-TTTCAAAGTGACTCAAACAGAGCTTTTCGCTACAAAGTGCCTTTTCAATTAGAATGCTGGAAATCAGACAGTGCAAAGATGTAAGGTAACCAGGGAAGGCAAGTTAGGGCTGCCTATGGCTAGATAGAACTATTCCTTTCTCGTTTAGTTCAGCTCCTTGAAGAAACCTGAGGTGCAAG-AGCAGCACATACCAATTTCTTGCATTTTCTCCCTTGTTTTGGTCTTGAGTGCCTTTATATGGTGTCTTATTCCTTCAAGTCTATTGTGAAGCTTCTATTAGTTTTTAAAAGCTTTTGTTTCCAAGAAGTAGGTTGCTACCTCTCCCACAACAAGAAAATAAAATTACTA-AGTACTACAACCTTGGGCCTGTTTCTAATCATTGGGAGATAAAA-------TGAGGGGATCATTTGACAGTCACTGTACGCTGGAAACATCAACTAATGACCTTTATTACTAATGACCTGGGCCCTCAGGCAATGAACCTAGACAACACTGATTAAGAGAGAAGCCTGCTGGTTTTTACAGCCATATAAAATTGAAGGAATCTTTGTGTTTAATAGAGAAGGAGTAGGACAGAGAAAGAAACGTAAAAATGAATGAGCTATAAAAAAAAAGACTTTTTTTCTTCCATTGTGCTGCATATTAGAGAACTAGTTAATAAATA chr4 + 94230402 60974003 60974002 60974749 60974003 60974002 60974749 747 GAGTTATGCCTG---CACTCCATGAAGCCTCAGAAGATCGTTTTGTTTAATAAGCTCAAAGATCCGAGAGAAACAATTGGTGGGAAAAATACCATAGGAGCTCGGCTTTCAAAGCGATTCAAACAT--CTTCTTACTACAAAGTGTCTTTTCAATTAGGATGCTAGGAATCAGACGAGGCTAAGAAGTAAGGTAATGAGGGCAGGCATGACATGGAGCCTTAGGGCTCCATGGGATT-TTCCTTCAGCATTTGATTGAGCCCCTTGGAGGAACTTAAAGTGAATGTAATAGCTAACGCCTAATTCTC-----TTCCTCATTTCTCTGCTTCCAGGT---TTCCTGTGCTGCCACATTC----ACATCTATTATGCACATCCGATGACAATTATAGAGCTTTTGTTTTCAGGAATTCACCAGTTTATTCTTT-------AAGAATTAAAATAACTTTAATAACAGGAGACCAGACTTGTTTCTTACCACTGTGAGATTAAAAGAAGGATGGAGGGATCATCTGAAAGTCTCTGTGTGCTGGAAACATCAAGTAATGACCTTTATTACTAATGACCTAGGCCCTCCAGCAATGAACCTAGACAACACTGATTAGGAGAGAAGCCTGCTGCTTTTTACAGGCATATAAAATAAAAGAAGTCTTTGTG-TTAATGGAG-AGGGTTATGACACTGTAGGATATGTAAAAATGAATGAGCTGTACAAAGAAGGAA--TTTTTCCTCCACTGTGGAAGACAGTGAAAAATTAATCCATCAGTA .::.....x...---..x:::x:.....:..x...x.:x.xx:x..............:x....:xx:.......x...x::.:..:..x...xxx...x.x:.:-........:..:.......x--...:.::..........:............:.....:.:........::x..x....x.........:x....x.....x.x:.x..xxx.:..x....xx..:.:.:.-......:xx.:...::..x...:.....:..:...:.:.:...x.x.-.::...xx.::..x.x....:-----...::.x..x:.:..x.:::::..---..:x.:..x..:.x:....----.x:......:..x.xx.:.x..x.xxx..xx.:...........:..:...x.x:x:x.:.xx:...::-------.::..x......x...x-.:..x:.x:.xx:::.:.:.......x.:..:..x.....x...-------..::........:...x....x....::..............x.........................:.......x:..........................:...............x.........x..........x:...:.:........-.....:...-...:x..x....xx.x.:..x.:.................:..x...:..:..x--......:....:....xx:x.:.x.::.:..:..:.:x..x.:.. 12M3D90M1I20M2D109M1D47M1I21M5D24M3D19M4D69M7D17M1I44M7I157M1D9M1D54M2D45M 523/737 71.0% 747/94230402 0.0% 39/737 5.3% 36168048 NA +3664 chr4 + 190214555 97181178 97181177 97181279 102 ATATACATACACACAGTTATATATAATATATATTAGATATAAACATATATTATATATAATATATATTAGATATAAACATATATATAATATATACACACAATT chr4 + 94230402 53982924 53982923 53983024 53982924 53982923 53983024 101 ATAAAAATAAATATAGGAATGTATAAAA-GTATAATATGTAAATACATATTACATATAAACTATATCATATAGTACAATATATAAAACAAATACAGATAATT ...x.x...x.:.:..xx..:.....x.-:...x.x..:....:.:......:......xx.....:.x...xx.xx.......x..:.x.....x.:.... 28M1D73M 72/101 71.3% 101/94230402 0.0% 1/101 1.0% 43198254 NA +3247 chr4 + 190214555 97201076 97201075 97201145 70 CGTGGTGGCGTGCGACTGTAGTCCCAGCTACTCGAGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:.::..--......:.........:..:........x.xx.x...x::........::.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 21167879 NA +3037 chr4 + 190214555 97201391 97201390 97201435 45 TGTTAAGCCTGATACTCATCTTTCTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 38344788 38344787 38344832 38344788 38344787 38344832 45 TGGTAAACCTGATATTCTTCTATTTTCTTTTTCTTTTTTTTTTTT ..x...:.......:..x...x.:........:............ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 58856603 NA +8538 chr4 + 190214555 97215352 97215351 97215856 505 GTGTCTGTCACATCATGTTGTAACTAGTAGTGTGGAAACTGACATCTGCCTACCAGTAATGGTGGTCATACCTCACTGCTACTCCAACTGCTCACAGTCCGGTTTAGCCTGCCACCCTGAGCTCCAGCCAGCTGTCAGGACTGTCACAGCTGCCATCTTATTTACTGCCATAAGCTTTCTTGGCATTGCGGACCCAGACACTGCTGAGTTGGCGCCTGTCATTGGCTGTAAAAGGCACAGGGACGAAAGACTCTGAGAAACCCTGGGAAGGTGCAACATGTTCAAACCACCTGACAGTGGAACCAGTCAGTGCTGAAGTCTCTGAGGTTGTTCTTTGTTGACTGATAAGATTGGACAAGGCACAGTAGGCCCTCCAGAACTCCTATTCAGAGTTGTTTTAATTGAATGTGTCACTGACAAGGGACAATCACTTGGGCTGTGGCATCTATTCCAAATGAAACAATTGTTTTAAAGTAATTGGTCTGACAAGAAGGC--TGGCAGACAT chr4 + 94230402 60998436 60998435 60998825 60998436 60998435 60998825 390 GTGTCTGTCACAT---GCTGTAACCAGTAGCATGGAAAATGCCATCTGTGGGCCCATCACAGC-------CCTCTCTGTCTCACTATACACCCACA-------------------------CCCTGGCCAGCTGCCGGCCCAGTCACAGCTGCCTCTTGCCACGATGCCATACGC-------------------CAGAC----------TGGCAC-----------------AGGGATGGGGAC--AGGGCTCTGAGCCACCC--GGGATGGGCAGCATGTTGGGGCCGGGTGGCTGT-----------------AAGCCCCTGAGGCAGCTCTCC----AGTGATGTGATCAGA----------TGGGCCCTCCA-AACATCTCGTCTGTATCCTGCTAATTGAATGTGGCACCGAAGAGGGACCTGCACTCACACTACTGTATCTGATCCGAGTGAAACAATTGCTTCAAAGTAATTGCTCTGGCAGACAGCTCATGGCAGGAAT .............---.:......:.....::......x..x......:xx:..x:.x.::.:-------....x...::x.x.:.xx::.:....-------------------------.:.::........:.:.xx.x............x::.xx:x::x.......x..-------------------.....----------....:.-----------------...x.::.....--.:.:.......xx....--..:.x.x...:......x:::..:xx..:.x..-----------------...:.:......:x.:...::----.x....:x...::..----------.:.........-...x:..xx..x.x:.:x.x:............x...:..x:......xxx....::x:..::x.:....:x...:.:...........:..:..........x....:..::x..x:--......:x.. 13M3D47M7D26M25D54M19D5M10D6M17D12M2D17M2D33M17D21M4D15M10D11M1D118M2I10M 267/388 68.8% 390/94230402 0.0% 119/388 30.7% 36216916 NA +3196 chr4 + 190214555 97219626 97219625 97219699 74 GTGCACCTGTAGTCCTAGCTACTTGGGAGTCTGAGAGGGGAGGATCACTTGATTCCAGGAAGCTGAGGCTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.........::..x.....xxxx.x.:.x.......x:....:.:x:.x:....::.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 21186422 NA +7847 chr4 + 190214555 97221643 97221642 97221915 273 TTATTTTTTTTCCCAGGATAACCATTGGCAAGTGGTCAGCCTGTCAGAACAGAGTCCAATTAAAATTATATATCATTGCAAGT----TTTCTCTTCT-CTGATGTCAATAATAGA-----GATCCTTCAGAGATAGCCCTCTCATATTCACTCCTGGGAATTTTAATTTCCTGACAAATCTATCATCTATAATTTACCATCAGGAATAGTCAGTCTCTGAGCATTGATAAAATAGCACAAATCCTGGTACTTCCCTTAGCACTGTGACAAAGAGACAATCTTT chr4 + 94230402 61001314 61001313 61001577 61001314 61001313 61001577 264 TTGTTTTTTTTCC----------ATTGGCATCTGGTTAGCCC-TCATGACACAGCCCTATTAAAATTATATATTATCACAGGTACCATTTCTCTAGTGCTGGTGTTCCCACTGGACAGGAGATTTTTCTGA--TAACACTTTGATATCCACTATTCAGTGCTTTAATTTCCTGACAAATTCATCATATGTAATTTATCACTGGGGGTTTTCAATCTC---ACAGTAATAAA--AGCATAGGGCTCGAGGCTTTCCGTAGCATT-TGATATATAGATTTTTTTT ..:..........----------.......xx....:....:-...x:...x..:..x...............:..::..:..----.......xx.-...:...:xx:.x.:..-----...::...x..--..:.x..:.x....:....x:.x:.x::..................::.....x.:.......:..:::..::.xx...:....---:..x.:.....--....:.::x.::.:x:...:..x.....:.-...:.x.x...:xx.:... 13M10D19M1D40M4I10M1I17M5I11M2D84M3D11M2D30M1D19M 181/254 71.3% 264/94230402 0.0% 29/254 11.4% 36220329 NA +3371 chr4 + 190214555 97223340 97223339 97223416 77 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:.....:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 56111162 NA +3127 chr4 + 190214555 97223344 97223343 97223420 77 AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG .:...:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:.....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 56111166 NA +3005 chr4 + 190214555 97223348 97223347 97223424 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.::...x:.....:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 56111170 NA +3014 chr4 + 190214555 97223356 97223355 97223432 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 41112178 41112177 41112254 41112178 41112177 41112254 77 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x...........:.x:x.::...x:.....:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 56111178 NA +3096 chr4 + 190214555 97235048 97235047 97235117 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 21201851 NA +3632 chr4 + 190214555 97236861 97236860 97236932 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTGGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x::...........:..x.xx:..:x.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 21203655 NA +3564 chr4 + 190214555 97237698 97237697 97237770 73 TGCACCTGCAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x..:...:.........::::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 21204493 NA +37715 chr4 + 190214555 97239011 97239010 97239654 644 TGGGTCACTGGA-AGGTGGA----GGAGTAGACTGAGGTAGACAATATAAACAGAGGCAAAATAATGGAGACAGATACCCTTAGAAGCCCTCTGAGAGTTGTTTATGAGTAGG---TGTGCCTCTGTATAGAGATAGACACCCAATAAGATCCTTGCATTT----CTGAAACTATTCTTCACCTGGAAAGGAAACCAAGAAGCACAAATAATACTAATAATAAAAAAAGCAAAGGACAGCAGAATAACAAATAACCACATATAGTCATTTCGGACCTATTCTGAAACAACAGAATGCACTTTAAAAAGCAGTAAAAACAATAAAAATTCAGTCATCATGAAAAAGGAGAGCCTTAGCTGCAATAAAGGCAGTCAATAAAGAAGCGCTCTCATTTAAACATCAAATGCACATTGTTTTGCAACACCTGTTATTCAGCCATAATAGCTTTCTTAACCTGTCAAAGTGTTTAAGCTGAGGAAAAGAAATGGGCCTCCAGCTGTGCAGTTCTGTGAAGAAAGCCTGTGCAAAGCGATATTAGTTTAATGAAATGTGTACAGATTGTAATTGTGGTAATAAGAGGGCAATTCCCTGAGGTGCCATAGGAAGACGGTGAGTGCAGCCAGGCAGAGAACAGAAGCTTGCAGGCTGAGGAGAGA chr4 + 94230402 61011206 61011205 61011839 61011206 61011205 61011839 634 TAGGTTGCTAGATAGATGGAAAATGAATCAAATCTGATTAGAAATAATAAGCAAAGACAAAGTAATGGAG-CAGAATGGCTTATAGCTCCACCAGGAGCTGCCCAGGAACAAGAAACGTAGTACTGGTGTGAGGCAGAGACAAAATAAAATTCTTCTATTTAGCACTGG---TACCCTTCACCTGGATAAGAAGGCAAAAAAC--------TGCAAATAAGAAAA---------GACATCAGAATAACAAATAACTGCAGACAGTCACTTCGGACCTATTCTGAAACAACAGAATACACTTTAAAAAGCAGTAAAACCAATAAAAATCCAGTCATCTTGAAAAAGGAGAGTCTTAGCTGCAATAAAGGCAGTCAATAAAGAAGCTCTCTCATTTAAACATCAAATGCACATTGTTTTGCAACACCTGTTATTCAGCCATAATAGCTTTCTTAACCTGTCAAAGTGTTTAAGCTGAGGAAAAGAAATGAGCCTCCAGCTGTGCGCTTCGGTGGAGAAAGCCTGTGCGAAACGATATTAGTTTAATGAAATGTGTACAGATTGTAATTGTGGTAATAAGAGGGCAATTCCCTCAGGGGCAGTAGAAAGGCGGTGAGCGCAGCCAAGCAGAAAACAGAAGC-TACAGACTGAAGAAAGA .:...::..:..-..:....----.:.x:.:.::x::x....x.xx....:..:..:....:........-....xxxx....x.:x:..x.:::...:..:::.x..::.:.---:..:x:x...xxxx...::...x..xx.....:..:...x:....----...:---..::...........x.:...:x...:..:.--------.:.x.....x....---------....x................::..x.:.....:...........................:....................x..........:........x.............:.................................x......................................................................................................:..............:x...x...:.............:..:.............................................................x...x..x:...:...:.......:.......:.....:.........-.:...:....:..:... 12M1I7M4I46M1D42M3I45M4I4M3D31M8D14M9D404M1D17M 518/622 83.3% 634/94230402 0.0% 34/622 5.5% 36227805 NA +6352 chr4 + 190214555 97245380 97245379 97245592 213 CAGCACGCTGAACTTCTCATCTCCAACTTGTGTTCCTTTTAATAATAGGTTTGAGGGTTTCTGAGACTTTCCCAACTGAGACCTCATGTTGGGAAGTGACACC-TTGCTTTTCATTGTCTATACTCTACTCTGATTCATGATATCATGTGGAGCATCATGACTGATATAATCTGACACACCTTGTCGTGGAGCCACATGCACCCGCTTGGAAGC chr4 + 94230402 61014457 61014456 61014662 61014457 61014456 61014662 206 CAGCACTCTG--CTTCTC----CCTACTT-TGTATCTTTTAATGAAGGTTGAGAGAATTGCTCAGACTTCTCCAGCTGAGGCCTTG-GTTGTGATGTGACACCATCACCTCTCATCAGTCACATCTTCTTCCAAGCAGGGATGTCACAGAGAACAATGTGACTGATGCAACCTGACACACCATGTCACCGTGCCAGACCTGCCAGCTGGGAAAC ......x...--......----..x....-...x:........:.x:.x.xx...::..x..x......::...:.....:...::-....x..x........-.::.:.:....::x::.:.:::.x:..::.x:x:x...:...::x:..:..x::........::..:..........x....::x.x....x.:x::..x...x....:. 10M2D6M4D7M1D56M1D16M1I110M 136/205 66.3% 206/94230402 0.0% 9/205 4.4% 36230923 NA +23199 chr4 + 190214555 97252263 97252262 97252848 586 TTATTTTTGACAGCCTAATTCATTAAAGCAAACACATTGACTGTTTAA----CATTCCAGAATCATTTGCTGAGGGACACATAACAAATATGGCCCCAGAGGGACTACTGACTGCCAACATACCTG--TGCTTATTTTACATTCGCCATCCATTCACCCCACTTTCATTCCATTTTACAGATCATTTCTCTGTCTTACTTCACTTTT--CCCTTTGGAATCAGGTTTTCGATGAGTCTCATTTTCTGCTTATTTTCCACCCTCCTTTTTCTTCCCTTCTCCCTGACCAACAAATGCTATATAACAGACAGACTCATTCATCTCTAGAACCTTATCTGGGGGAGCATATGTTTCTTTTCTTTGAGGTCAGATGAACTATTCCTTATATGCAACAAAAAGAAAAAATATGCATTGGCAGCAAATTCTCCTATGGTTGACCATCATTTCTGTCCACTATGTTAAGCCAATTTCACATGCTTAAACATGCCTTTTGTCATCAACAACAAAAGCAAAAGGCAGCTGAACTCTGGTTAATAAATCATTTTCTGT-GGCAGAAAGACTGCTTGGGAAATATGATGCCAGACATTCAAGACTA chr4 + 94230402 61018127 61018126 61018679 61018127 61018126 61018679 553 TTACCTTTATTAGCCCAATTCA--------AAGACCTGCACTGTTCAAACCCCAATCCAGAACCACA-GCTGAGAGCAAAATATTAAGGGAGGACGTACAGAGAATGCTGTCTGCTACCATATCTGCCTCCCTACCTTCCTT---CTAATTAATCCCCCTCTCTTCTTTCATTTCTGC----CACTTCCTAGATTTGCTTCACTTTTTTCCTTCTGGAAC------TTGGGTAAGTCTTCCTTCCC---------CTGTGCTCCATTTCTTTATTCTCTCTTATACCAACAAATACTCCATAGCAGACAGATTCATTCATCTCTAGCACCTTATCTGGTAGAGCATATGTTTCTTTTCTTTGAGGTCAGATTAACTATTCCTTATAAATGGTACAAAGGAGAAATATGCGTTGGCAGCAAGTTCTGCTACTCTTAGCCATCATTTCTGTCCACTGCATTAAGCCAATTTAACATGCTTAAACACGCTTTTTGTCAACAGCAACAAAAGCAAAAAGCAGTTGAACTCTAGTTAATAAATCATTTTCTGGAGGTAGAAA-----------AAAAAAGATGCCAAGCAGTTATTGCTA ...::...:x:....:......--------..x..x.xx......:..----..x.......:..:x-......:.xx.x...x:..:x:x..x.x:.x..:..x.:...x....:.x....:...--.x.:..::..x.x.---.:.x::.x..x...:x::...x...xx..:.:.----..:...::x.x:..:..........--..:.:.....:------..x.:.:.....:x:..:.:---------.:::x....x...::..x:::....::xx..........:..x:...:........:..............x...........x:...............................x..............x:::::.x....:.:........:..........:....x...:xx..::..................:::............x.............:..:........x..:..............:....:........:...................x-..:.....-----------...x.x.......::..x.:.xx:... 22M8D18M4I15M1D58M2I14M3D33M4D25M2I11M6D20M9D293M1I8M11D27M 406/544 74.6% 553/94230402 0.0% 51/544 9.4% 36234136 NA +3291 chr4 + 190214555 97254592 97254591 97254650 59 TTTTTGTTTGTTTGTTTGTTTTTATTATTATACTTTAAGTTTTAGGGTACATGTGCACA chr4 + 94230402 61357737 61357736 61357795 61357737 61357736 61357795 59 TTTTTGTTTGTTTGTTTGTTTTTCATTTTATTCCTCAAGTTTTGGAATAAATACACATA .......................xx.x....x.:.:.......:.::..x..:::..:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 35896855 NA +3096 chr4 + 190214555 97260268 97260267 97260337 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 21227071 NA +3802 chr4 + 190214555 97306607 97306606 97306703 97 TTGATTTATATCACCAGCCAAAACATCACTCACATTTAAATTTTTTTCTTTTTTAAAAAAAGAAAATT-CAGATAATTTAAAGACATTCAAATGTGCG chr4 + 94230402 33996461 33996460 33996553 33996461 33996460 33996553 93 TTGGTTAATTTCATTACGCAAAACAAATTTCAAAATTAAATCTTTTTCTTTTTTAAAAAATGAAAATTGAAAATAATT--AGGAC---CAAATGTGTG ...:..x..x...::.xx.......xxx:...x.x......:..................x.......-x.:......--.:...---........:. 68M1I9M2D5M3D10M 73/92 79.3% 93/94230402 0.0% 6/92 6.5% 63310146 NA +3085 chr4 + 190214555 97315266 97315265 97315344 79 ACCCGTGTGTGTGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATATATATATATAATCATA chr4 + 94230402 85834534 85834533 85834612 85834534 85834533 85834612 79 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .::.:.x.....x...................xx..::.x::.:.:.::.:..x.....::.x...::.:.:.xx..:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 11480732 NA +3371 chr4 + 190214555 97315270 97315269 97315398 129 GTGTGTGTGTGTGTGTGTGTGT----GTGTATACATACACA--TACATACGTATACATACACATATATATATATAATCATAGGGCTATACTGCTTTAGCT----GTGTCACACAAATTTTAATAAGTTGCTTTAAATTT chr4 + 94230402 85834542 85834541 85834679 85834542 85834541 85834679 138 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCACTTGAATTCTAA-AGGTTGTATGAACTTT ....x.................----:....x:......:.--..x....:.:.x:..:....:...:.:.:..:::.xx:..:x.x.x..x..x..xx.----:.x:...x::....:...-.:....:x.x..x... 22M4I15M2I57M4I18M1D16M 87/128 68.0% 138/94230402 0.0% 11/128 8.6% 11480728 NA +3133 chr4 + 190214555 97315270 97315269 97315339 70 GTGTGTGTGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATATATATATATAA chr4 + 94230402 79265521 79265520 79265590 79265521 79265520 79265590 70 GTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAA ...........::........xx......:.:.:...::::.:.::.::..x...:..x.:.:.x:.:.. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 18049749 NA +3480 chr4 + 190214555 97315270 97315269 97315335 66 GTGTGTGTGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATATATATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx.:..:.....:.:..:.::.:.:..::.x......x.:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 18049751 NA +3509 chr4 + 190214555 97315271 97315270 97315348 78 TGTGTGTGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATATATATATATAATCATAGGGC chr4 + 94230402 85834541 85834540 85834618 85834541 85834540 85834618 78 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC .....x.................:.xx.::..x:........:...x.:.:.:::x...::.:.:...xx..:.x... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 11480730 NA +3491 chr4 + 190214555 97315272 97315271 97315337 66 GTGTGTGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATATATATATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx.::...:.......:::..::...::..x.:....x.:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 18049753 NA +25097 chr4 + 190214555 97317196 97317195 97318105 910 CATTAAAATAATTAAATTAGAATATAATGAAGTAAATTGCTATGAAGTGCAAGAGAAGCT---GATGACATCATCGTCTCAAAACATCCCCAAAA-------GTCAAAAATGCTTTATTCATTGTTTTCTGT---CACCAGGGAGCA---TTGACAACCTTAACGACATCTAGGTTTTTTTCCAGCCAGTGGATTTTGGACAGGGTTGAAAGTTTTTTGTTTG-----------AATGGTTCACAGCCCCAGTTAGGAACAAAATT--AGCCACTATCATGGGATGGGTGATTATTTTCACAGAAGACTTCT---TCTGAGTATATTTGAATTGCAAATATCAAAACCCCTAAAGAAAGTGAAGGCAAAAAAAAAAAAAAATTGTGTAAGTTTTCTTAAGAGCAGCAGTAAGTCATTATCAAGCAATTAGTGTTGTAATAAGCTCCCATTTCTTAGTTTGGCATATTTTGTTCAATACTGGAAATATAATTATGATAAAGGTTGAAGACACAGTACAGTACTTATATGTTAACCATTTATAAACAATTTGTC-TCTAATGACAGACAGGAGAGCATGTAATTACACTCAGCATTTCCA-GAAAGACTGACTATTTGCCAAACAGCACTCCATTTGATTGCCTTTAAAGTGCAATCCTGGGTTGTTAAAGTGAAAATA-GGATTTTTGGTTGCAGGTAATTAACTTCCCCCCACTCGCCCCCTGCTATTCTTTTCTTAGTTGTTAATGAAGGGCTTTTGAAGTCTTCATTACCAATGGGTATTTGTCAATGCCAAAAAAAAATACAGAGCCCCA---AACCCTTCAAATAACC--TTCTTCTCTAT------------------CATT--------CTGTGTAAAATCTTTGAAATAACTAATGACGTCCTGAAAGGTGCAAAGGGCAAAGCTCACACACTGAATTGAGGCAAGTCATCAAGCAGGATGGGAGAAGA chr4 + 94230402 61034336 61034335 61035252 61034336 61034335 61035252 917 CATTACAACAATCACTTTACAACTTAA-------AATTCTTAGG-----CAAGAGCAGCATGAAAAGGTATAAT----TTAAAGTATCAACAAAATAAGAATGGAAAAAAGAACTAAATCATT--TTTCTGTAAACATCAGACAGAAAATTCTGTGAGACCAATGAAATCTTTGTTTCTCTTCCATCAGT------TAAACTGTCTTTAATTCTTTTTTCCTCTTTTCCTCCACAGTGGCTTGTAGCCCCTCACAGAAACAAAAATTAGGCCACAATCATGGGATAGATTATTCTCTTTGCAGAAAGCTTCTGATTTGGTTTGCATTTGCATTGCAAATACTGATGGCCCTAAAGAAAATGCAGGGGAAAAAAAA--------------GTTTCCCCATGAGCAACAGATATTCATTAGCAGGCAATTAGCTCAGTAATAAGTTCCCATTTCTCAGTTTGGGATATTTCAACAAATATTGGTAATATCATTGTGACAAAAGTTGAAGACATAGTACAGTATTCAACTACTAACAGTCCACAAACCATTTGTCTTCTCTTGACAGACACGAAAGGCTCTAATTACACTGAACATTTCAAGGAAAGATTGAATGTTTGCCAGACAACTCTCCA-TTGATTGCCTTTAAGGCATAGTACTGGACCGCTGAAGGGAAAACACAGATTCTTGGCTCCAGGTAATTAACTT-------------TCATGTTGTTTTTTTCTTAAACCCAAATGAAGCTCCCTTGAAGTCTTCATTACCAA-AGGTGTTTGTTAATAATAATAAAAAAAACAAACAGCCAGCCAGCGGTCCTATTTCCCCTTTCTTTTCTATAAAATTCCCTCTGCTATACATTTCTCAGGACTCAGTAACGTCCTCAAAGTGAGTAATAATGGTTTGAAAAGTGCAAAGGGTGAGGGATACCTAATGAGACAGGACAAAACA------GGAATGAGGGAAAA .....x..:...:.xx...x..:x...-------....x:..x.-----......x...x---:.x.::..x..----.:...::...xx.....-------.xx.....x:x:.x.x.....--.......---..:...:x..x.---.:x:::.xx::..:..x....xx....:.:.:.x::....------.::..x.xx..x..xx:.....x::.x-----------.:...:.:::......xxx:..:.......x.--:.....x..........:.:.x...x.:..::.....::.....---.:x.xx.::.....x..........:::.x:x...........:..x...x:........--------------....:.::.x.....:...xx.x......x..:........:x:x........:..........:.......x......::x:x....:...x.....x...:...:...:..........:.........:.:.xx.::....x:.::.:....x.......-...xx.........x..:..xx.x..........x.:......x.-......:...x.:.......:...:.x.....-..............:.:::.:.x....:::.:.:...x.....:.-:....:....:.x..............-------------:.x..:.:..:........:x:x:x.......xx.::...................-:...:.....:...:x:..x......x...:.xxx...---.:.xx.:.x.x.xx..--.....:.....------------------....--------..xx....x:..:.::..:.:.x....:.:.x::.....:..........::.:.xx:..x:.x...:x:::.:...:x..------:.:...:.:...:. 27M7D10M5D11M3I11M4D17M7I21M2D7M3I12M3I40M6D27M11I32M2I44M3I60M14D163M1I45M1I32M1D45M1I27M13D56M1D38M3I16M2I11M18I4M8I81M6D14M 597/851 70.2% 917/94230402 0.0% 125/851 14.7% 36282860 NA +3090 chr4 + 190214555 97323540 97323539 97323592 53 TATATATATATACATATATATGTGTGTGTATGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325504 27325503 27325556 27325504 27325503 27325556 53 TATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ....:.:x.:x..x..x............:.:.........::...:...... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 69998036 NA +3127 chr4 + 190214555 97323540 97323539 97323589 50 TATATATATATACATATATATGTGTGTGTATGTGTGTGTGTGTGTATATA chr4 + 94230402 6857613 6857612 6857662 6857613 6857612 6857662 50 TATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ....::..:....:....x..........x...........x..x.x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 90465927 NA +19592 chr4 + 190214555 97334711 97334710 97335202 492 GGACTATTGTGTCAGAAG-GGAAAGAAAGAAAAAAGAAATATATATATATACATACCTCCTTATA-TTGTTCCCTGGCA--GTTTTTCATTTAGAAGGTCTATTTTATAAATGTGTGTTTTTATTCATCTTTTTCCTCATGCAAGGATTGAAAACGAGAAATAAATTGGTTTAATCATTTTCTGAGAAATCAGCTAAATTCTAATGTTGTTTGATCACATCCAGTAGCAAAAA---TGTCAAGTGCATTTCCATTTAGAGTGCTTGCTTAAATAGCCATGCAAATAGGGAACACCCAAAAGTCGGCATATATCATGAGACAGTTTTGAATTTTTTATCTAGCACACCCTTGCATTAATCCAGTCTCTTACTCTTGAAAATAATGCATTTTTCCAGCACATCA-TTCCTTAAATGAGGGTGATACATCACCACTGGAGATTCACCAGTGAGGCACATTAATAAAGG-CAGACAGCTTCAGTTGTGTTTTTTGGGGAGAAGGT chr4 + 94230402 61044210 61044209 61044704 61044210 61044209 61044704 495 GGATTGTTGCATTAGGAGAGGAGAGAGAGAGTAGTGGAAAAAAAAAAATGACATTCCTCTCTAAGCTTCTTTTAAGACATGGTTTTCCATCTGG--GATCATTTTCATCAACATGTCTTCTCTCTCCATTTTCCCATTA-GAAAGAACTGGGAATGAACAAGAAATTTGTTTAATCATCTTCTGTGAGATCAGATGAATTCTAATGCTGTTTGATTACAGGTAGTCACAAAAAAAATGTCAAATGCATTTCCATTTAGAGTGCTTGCTTAAACAGCCGTGCAAATGAGGACGTCCCAAAAATCAGCATACATCAT--GCCAGATTTGAGTTTCCT-TATGGTGTATACTTGTTTCAATCCACTTTCTTGCTCTTTAAAATAATGCATTTTCACAGCACATTATTTCCATAAATGAGCATGATACATCACTGCTGCAGATTGACTCATGAGGCCCATTAATAAAGGCCAGGGTTTCTCAGTAGCTTTTCTCATTGGGAAGGT ...:.:...::.:..:..-...:...:...:x.:x.:..x.x.x.x.xxx....x....::..x:-..x..::xx.:..--.....:...:.:.--.:..xx...:..x..::...x..:.:x:..xx:...::.x.:.-.x...:.:..::..:..:x..x.....x..........:.....x..:.....x.:..........:........:...xx:...x:......---......:.............................:....:.......::...xxx.......:..:.....:.....--.x...x.....:...::.-.x.:.:::.:x....:x.:......x.:....:.....x...............:x........:.-....x........x:...........::...x.....x..:x:......x............-...:xxx::.....x.:x...:.::xx.:...... 18M1I46M1I13M2I13M2D43M1D93M3I79M2D18M1D66M1I62M1I35M 352/486 72.4% 495/94230402 0.0% 15/486 3.1% 36290501 NA +3775 chr4 + 190214555 97345488 97345487 97345561 74 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 21312284 NA +3633 chr4 + 190214555 97355390 97355389 97355462 73 TGCACCTTTAGTCCCAGCTACTCGGAAGACTGAGGCAGGAGAATCACTTGAACCATGGAGTTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.x....:.........:.:...:.....x.xx.x...x..........xx.:..:.xx:.....:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 21322185 NA +16039 chr4 + 190214555 97360442 97360441 97360804 363 ATTTTTTGACCATGTTTTATAAAAATCATCTGTT--AGATGCAGTAAGCTCAAGCAAACATAAATGTAACCTTCCATTTCTATCTCTGAGGTCCAAGTGACAATGATTCAGAAGTGCCATATTCAGAATATAATTCATAGATAATTATGTTCCATATTTGTAAGGAATCTAGTACATAAATCCTTAAATGGAGCAGTTTAACCAACTTTAAAAGAATGAACAGCTGAATTGAATTGTAATG--ATATAATGTAGAATCATAAAAATTGAAAGAGTATAGTCACCTTGTAAATTTTCTCCATTTCATATTTATGTTCTCTCCTCTATTTATTGTGTCATATATCAAATGATTCTGCTTCCTCAGAAAC chr4 + 94230402 61051510 61051509 61051870 61051510 61051509 61051870 361 ATTATTGCATCATATTTTATCAGATTCATATGTTCAGAATACTATAAACTCAAGCAAATATAAATATAGTTTGACCTTT-TATTTCGAAGACACCAATGACAGTGATTCAATTTTGTCATTTTCTGCCTGTAAGTCACAGATAATTATATACTATACTTGTGAAGAAACTAGTCCATAAATCTTTAAATATAGCACTTTAACCAAGTTTCAAGGAATGAATAGCTGGATAGAATTGTAATGATATATAATGTGGGAGCATAAAAATTGAAGACTTTCACTTACCTAGTAAATTTTCTCGATTTTATACTTATGTTCTCTTCTATAATTATTACAATACAT-----ATAATTTTACCTTCTTTGATAC ...x..xx.:...:......x.:.x....x....--::..:.x:...:..........:......:..:::.xx.x...-...:..x:..::x.x.:.....:.......:xxx..:...x...x.xx.:...x...:..........:.x.:...:....:.:...x.....x........:......:x....x.........x...x..:.......:.....:..x...........--.........:.:.x.............::xx.x:.x.:....x............x....:...:...........:..x..x.....:::x:.:..-----..:...:.:.:.:..:x..x.. 34M2I43M1D161M2I97M5D22M 263/357 73.7% 361/94230402 0.0% 10/357 2.8% 36308932 NA +4015 chr4 + 190214555 97376233 97376232 97376390 158 AGATAGAGGAAGAAAGAAATAAATAAAAAGAGCGAGAGAAGGAGAAAAAGCAAAGAAAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAGAACGAAAGAAAGAAAGAAAGAAAGAAAAGGAGAGAAAGAAAGCATGATAATT chr4 + 94230402 65771195 65771194 65771345 65771195 65771194 65771345 151 AGACTGAGGAAAAAA-----AGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAA--TAAAGTCAGTAAAAAAAAAATGATACTT ...:x......:...-----.:.x..x..:..x....:...x.x.....x..:..:.........xx.:..x:.:.:x.::x:xx.::..:...::...:..x:..x.x.:.:x.x......x..x..--x....xx::x...:...:x......x.. 15M5D108M2D28M 97/151 64.2% 151/94230402 0.0% 7/151 4.6% 31605038 NA +3056 chr4 + 190214555 97385098 97385097 97385137 40 TCTGCTGTGGGTTTTTGTTTGTTTGTTTTACTTTTCATTT chr4 + 94230402 23186419 23186418 23186458 23186419 23186418 23186458 40 TCTGCTGTGGGTTTTTGTTTGTTTGTTTTTGTTTTTATCT .............................xx....:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 74198679 NA +36239 chr4 + 190214555 97396315 97396314 97397291 977 ATGGAGACCAGGTTCAGAACCTGCCACTGTTAATGAAGATTTATTCACCAGTGACATTTGATCAGATCTACTGGGTGGATTCTTAGAATTCATTAGTTAAAGACATAAAGTGGTCTCTCTGATTAAAGAGGGGAAAAACAGTAGGGAGCACCCATAAATTACTATAGCTCAATTAGGTGCAGACAGTTTAGTGACTGTTTATTACTAGTACAAAGGAAGATTTTCCAATTAGATTAAAAGGTTTTGAAAACAAAAGTTATAG-GCACAGTGATTTAGGCCGATTGCTAGAATAATGCATTGTGAGAAACTTTATTGATTAAAAAGTAAACCAGTAAGTTATTTGTAGTG-TTCGTTGTTTATCAGTAGAATCCTTGCT-GTGAGGTACAATTTTCTTCACAAGATCAATGGGAGAACTGGGCTAA-TTTCTCCTTGCCCTGAAAATTGATAAGCATATAAAGGGCAGCTATATCACTGCTGAAAAGACCAGCATGATTTATTCAGGTTAATCATCAAGAAAGTGACACTGCATAAATCACTGGGGATGTA-CCCTGCCAGGCTGGGCCCTTCAAGCTGGCTTCACTGTCAT-AAGTTGGGCCAAAAAGAAACAAAAAGAAACCTAGGATTTAATAAGACAAAGCCTTTAGCT-TGCTAAGCTGCCATGAACT-ATTGCAAAACCTGGAAATGGCAAGAAATCAAAGGGAAGTTGCACAGATGCCTTCTCTGGTAGTGAACA-CTAGAAGTTACAAGAATAGTTTGGTGGAATGAAGCCTAAGATGCTAGCTGGTAGCTCATGTGTCTCTTTGTTTGAAAGTGTC-CATATGAATTCTAGGAGTGCTGAATATGCTGGAAATT-GCTTTGCTTGGCCAGAG----------TAGGCATTGGAGTAGGCA---------TTTCATTGGCCTCAATTTACTGCTTTCTCACTACCTGTGATTAAATATGAAATAAGG---------------AAAGAAAAGCAAAGAACTGATAGTTAAGTATCT chr4 + 94230402 61057287 61057286 61058288 61057287 61057286 61058288 1002 ATGGGGAT---GTGCAGGACATGTCAGTGTTAATGAAGATTTATTTAGCAGTGACATTTGATCAGATCTACTTGATGAAGTCTTAGGTTTCATTAGTTAAAGACATAAAGCAGTCTGTCTGGTTAAAGGGAGAAAAAGCAGTGGGGAACTCACATAAATTACTACAGCTCAATTAGGTGCAGACAGTTTAGTGAGTGTTTATTACCAGTAGAAAGGAAGATTTTCCAATTAGATTAAAAGGTGTTGAAAACAACTCTTATAGCACACAGTGATTTAGACCCATAGCTGGAATAATACATTGTGAGAAGCTGCATTGATT-AAAAGTAAGCTGGTAAGTTATCTGCATTGCTTCATTGTTTATCAATGGAGTCCCTGCTGGCTAGGTACAATTTACATCACAAGATCAATGTCTAGACTCAGCTAATTTTCTACTTGGTCTGAAGATTTATATGGGTGTAAAGGGCATCTGTATCATGGCTGGAAATACCAACAAGATTTATTGGGGATAATCATCAAGGAAGTGAAGATGTATCAATCACCAGAAGTGTATCTTTGCCATGCTAGGCCCTTTACACTGGCATCCCTGCTGCAAAGCTGGATTTGAA------GAGAAGACAT------TTTAATCAGA-AAAGAATTCAGTTCCAGTGAGGTTCCACAGGCTCATTGTGAAAACTGAAAAGGGATTAAAACAAAAGTGGAAATATGCAAAG---TGCTCTGGCAGTGGTCAGCCAGTGTTTTTGACAAGTGATTGAAGGTACTTGTTGTACAGTACAAGTTCATGATTCATGGAGCCCAACGTCCTACAGAACAGAATGTGACTTCCAGCAGTGCTGAGCTAGCTGGAGTCTAGGTCTGCTTTGCCAAAGGATTTTTGGATACAGACTGGGAAAGGTAGGGGGTCATTGTGCCTGGCTCTGAATGACTGATTGTTTCCCATGCAGAATGGCATGGGGAAAGAGGTGGGGAAGAGAAGGAAAGGAAAAGAAAATAAATGATATTTAAATTCCT ....:..:---..x...:..x..:..x..................:.x........................x.:..:.x......:x......................::....x....:......:.:.:....:....:....:.x.x............:.............................x..........:....x...............................x..........xxx......-:.............:..x..x...:.......:...........:..x:.......-........:.::.........:..:.x..-...:..........:.:..:...:....-.:x...........x.x..............xxx::...x:.....-.....x....x:.....:...x...x.x:.:.........x..:.....:x....:...x....:..x........x:..x...........:......x:x..:..x......::.:::....-.::.....x...:.......:.x:.....x..x...::::-...:...:::x:..------:.:....x.:------......x...-....xx..:..:.-::x.:..x.x...::::..-....::...x...:...x..xxx:...:x....x.:.:x.:::..:.x---.x......:....:x..-.:..x:x..x::.x..xx.x...:x..x.:xx:x:x..x::.:.x..:.x:.:::.....x:x.:.xx:..::x.x..x::x-x..:...x...:..x........::xx......:x:.-.x.:.....x....:..----------..x:x.:...::x...:.---------.x.xx:....::::.x.x....x..x:.:x.:.:x::x:..x:x..:x.:..x:...---------------..:......x...x..x.....x....:.x:.. 8M3D251M1I56M1D29M1I28M1I46M1I124M1I40M1I14M6D10M6D10M1D13M1I19M1I48M3D17M1I82M1I37M1I17M10I18M9I57M15I33M 689/957 72.0% 1002/94230402 0.0% 65/957 6.8% 36339028 NA +3349 chr4 + 190214555 97401126 97401125 97401198 73 GCTTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTGTTGTTGTTGTTTTTGCTTTCCATTTGCT chr4 + 94230402 64090134 64090133 64090206 64090134 64090133 64090206 73 GCTTTTTTGTTTGTTTGTTTCTTTTGGTTTCTTTTGGTTGTGTTGTTCCTGCTTTTTTTCCTGCCCATCTGCT ......x.x...x..xx...x.....x...x.....x..x.......x:..:.x.....x..x:....:.... 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 33310992 NA +3126 chr4 + 190214555 97435012 97435011 97435046 35 GGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTGAG chr4 + 94230402 28561218 28561217 28561252 28561218 28561217 28561252 35 GGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTAAG ................................:.. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 68873794 NA +3423 chr4 + 190214555 97454522 97454521 97454595 74 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGGGATTCAAAAGTTGCCACTACTGGAATAATCA chr4 + 94230402 27719997 27719996 27720070 27719997 27719996 27720070 74 AAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGATTGAGGGATCACCAGTTCTGGGACAAACA ..:..:....:.::.....:......:..::.:...x.....:....x.::::.::...x.x....:.:..x.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 69734525 NA +3034 chr4 + 190214555 97486788 97486787 97486842 55 TGGATAAAGAAACT------------GTGGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 72321864 72321863 72321930 72321864 72321863 72321930 67 TAAATAATGAAACTTTAGTAAGAATAGTGCTGTGTTAATGTGTGTGTGTGTGTGTATACATATATAT .::....x......------------...x.....xx:....................:........ 14M12I41M 47/55 85.5% 67/94230402 0.0% 12/55 21.8% 25164924 NA +3638 chr4 + 190214555 97486805 97486804 97486873 69 GTGTGTGTGTGTGTGTGTGTGT----GTGTATATATATATATATATATGTATGTATACAAACACACACACACA chr4 + 94230402 85834542 85834541 85834614 85834542 85834541 85834614 73 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ....x.................----:....x::...:....:..x..::....x..::x.....:....... 22M4I47M 54/69 78.3% 73/94230402 0.0% 4/69 5.8% 11652263 NA +3810 chr4 + 190214555 97486806 97486805 97486879 74 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.................:.xx..:..x::...:.......x:..:.::xx:.::......:....... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 11652265 NA +3377 chr4 + 190214555 97486807 97486806 97486865 59 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx.:......:...:.::...::::.::......:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 18221288 NA +3810 chr4 + 190214555 97486808 97486807 97486881 74 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x...................xx..:..x::...:..:.:.:x.....x::x:.::......:....... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 11652267 NA +3688 chr4 + 190214555 97486810 97486809 97486883 74 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x...............:...xx..:..x::...::......x.:.x.:::x:.::......:....... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 11652269 NA +3435 chr4 + 190214555 97486812 97486811 97486885 74 TGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.............:.:...xx..:..x::..::..:.:..x.x...:::x:.::......:....... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 11652271 NA +12021 chr4 + 190214555 97496202 97496201 97496759 558 TTCAATAAGAATATACCGTAAAGAGAATAGCA--AAAATAACTTGCAATTTTTCATTTGCTTTTTAGCGATTA---TAAGTACTTGCCTAGGTCAATATGGAATTCTAACAGTTGAACAGAATGTCCTTTGTATCCCTAGGCAGACAAAATAGAGCTGCCTCAGGGAAAAGAATTTATTAAACACACTCCCCAAGACACATGCTG-AACTCAAAATTACACAGCATGCATCTAGTCTC-AAAAGATTCTGATTTGCTTTTCAGTCAAATGTTTCCCGCTGCTAGAAAAAATGTAAGCTTTGTTTCATGAAAAGCTTTAACCTGAGAATTACTGCACTGCCATGGTTACCCAGCAAAATAGATTGCATAACCTAGAAGGTAGC--AAGAAAACATTAGGTTTGGAAAATAAAATGATCTTCCTG------------------TTGGAAAAT-------------CATAACGTGTACCCCCTATGTTTGTGTAGGCATCTGTACAGCTTAGCCCATTCTCTCAGAAG-ATCCTAACTCTGAAGGAAGTT-CCCACAGAGCAATATGTGTATCCCGGCAGTGTGTGAATCATTTCTCTTATCT chr4 + 94230402 61076048 61076047 61076637 61076048 61076047 61076637 590 TTAAATCAGCATGGACTTCCAAGAGACCAGTAGAAAAATGATTAACA--TTTTTACTTGATTTT-AACAATTAAGTTCTGTATGTATATAGAAGAAT---GAATTTTAGCATCTGAACAAAATGCCTATTGTAACTACAGGCAGCAGAAACAAAGCTGCTTCTGGGAAG-GAATTCATTAAACTTATCTCCCTGTAGATCTACAATAACTCAGAACAACAGAGCAGGTATCTCACCTCCAGAAGATCATGGTATGCTTTTCAGTCAGGTGCTTCCTGCTGCTGGTGAAACT-TAAGCTGCATTCCCTGAAGAGGTTTAATTCACGAATAATTACACTGTCATGGTTACGAGGTAAAAAATATTGTA-GGCTCAGGGGGCCACCAAAGAGAACTGGTGGTCTGAGAAGAAAAACGACCTATTTGGTATTTCTTTTATATATATTTGTAAATATAAATAGATACGTATAACTCTTAGTACATATGCATGT-TACGTATCTGTAAAGTTTAACTGAGTATCTCCTAAACAACGAAACAGTGACCCAATTCACCTACAGTGCACTGAATGTGGTGCAACGTTTTGTAGCTCATTAGCGTTATCT ..x...x..x..:x..:x:x......x:..:.--.....:.:.x:..--....:.:...x....-.:.:....---.xx...:x.::x...:xx...---.....:..:..x:......:....:.:x.....x.:x:......xx:...:.:......:..x.....:-.....:.......x:.:::...x:x.x.:x.:.x:-......:..:x...x....x.:....x::...-.:.....:x..:.x.............::..:....:......:.x:...x.-......x::..:.x....:..x.....::::x....x.:.:.....:.........xx:.:....x.x....:.-::.::..::..:x:.--....:...xxxx...:..::..:x....:..:..x::..------------------..x.x....-------------:.....x:x..x:x.x....:x...-..x.:.......x..:...:.:x.x.x....xx..:-.x.xx...xx...xxx..x.:-..:....x...x.:x:...:x:x.::.:x.x...::x.....xx:x...... 32M2I13M2D15M1D8M3I21M3D69M1D35M1I32M1I52M1D74M1D15M2I39M18I9M13I25M1D36M1I21M1I52M 357/548 65.1% 590/94230402 0.0% 52/548 9.5% 36420154 NA +3697 chr4 + 190214555 97504028 97504027 97504200 173 TTATTTTTAATTTATTTTTATTTAAATATTTTATTTTATTTTTATTTAAATATTTATTTTATTTAATATTTAATAAATAAATAAATATTTATTTAAATATTTTATTTTATTTAATATTTAATAAATAAATA-AATATTTATTTAAATATTTTATTTTATTTTTATT--TAAATATT chr4 + 94230402 69907725 69907724 69907886 69907725 69907724 69907886 162 TTTTCTTAAACCAATTTGAGTTTAAATATTTTATTTCATTTCACTGGAAAGATTTATTTTGCTTCATACTGGATCAG---------ACCTACC---ATATGTTTCCTTGTTAAATACTGAATTAATATACGTAATCTGTATTTTA--ATTACATCTTAAATTAATTACTAAATATT ..x.:..x..::x....xx:................:....:xx.xx...x.........::..x...:.x:..x.:---------.::..::---....x..x::..:..x....:.x...x....x.::-...x.x.....x.--...x:..:...xx..x...--........ 77M9D7M3D35M1I13M2D19M2I8M 110/159 69.2% 162/94230402 0.0% 17/159 10.7% 27596303 NA +3194 chr4 + 190214555 97507061 97507060 97507142 82 TGTGCCTATCATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATGACTTGAGCCCAAGAGTTTGAAGTAGTCAAACATAGTG chr4 + 94230402 76033205 76033204 76033286 76033205 76033204 76033286 82 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::.x.:.x:.:...........::........x.xx.x.:.xx......:....::..:..x::.:x..x:.....::.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 21473856 NA +3165 chr4 + 190214555 97515774 97515773 97515831 58 ACAAACTTTT--------ATACACATATACTTATGTGTGTATGTGTGTGTGTATATATATAGAGAG chr4 + 94230402 8684307 8684306 8684372 8684307 8684306 8684372 66 ACAGATTTTTCAGAAATAATACATATAGCTCTATGTGTGTATCTGTGTGTGTATATATATAAATAG ...:.:....--------.....:...xx::...........x..................:.x.. 10M8I48M 48/58 82.8% 66/94230402 0.0% 8/58 13.8% 88831467 NA +28453 chr4 + 190214555 97517675 97517674 97518437 763 TTCCTTCACTTTTCAAATATT-----TTTCTCTTTAATTATTCTAGGTGTCAAAAAGCTATTGATTTGA-----------------CAAACCACATTACTAAATCCATTCCTATTAACCACAAAACAA--TAACTTAAAAGACTCAACCCATGATTAAATTGCAGTTT-----AAATG--------------TTAACAACTGAATTAATTTCAATATGCTGCTACCTTGTTCATTTTCCTGTTTGAAATTTTCTATTGCTACTTTAACAAAAAGAATATCAACCATGTTGTCTTTATGGATTGCTCACTTATTCAAATAGCTATTACTCATCTACTAAAAATAAGGCGAATAATA---AAGGCTTTCTAAAACTATATATCAAGGAGAAAGTTTTATAGCTTTAGTATTGCTTACAAATCAATTCCTTAGAGTTGGTCTGCCATTAGTAGCTTTTAAGACTGCCTAGAGCTGTGTCATTCACTGCTATTTTGACACATTAATGCACTAATGGTATGTGCAGGCTGACATAACTTCTCTCTAGTTCTATTACAATAATTATCAAGACCCTTCTATGAGACATACAAAGTTAAGCAAGGTGACAAAGAGTATGTAAATACTCAAGTATTCCTGAAGCATTCATTTAAAAATGACAGTGAATAATTAAGAAACTATAAAAACACCAAGATAAAAACTATCTGCTGAGAACCTCATCAGAGGAAACAAACCATGAATAAAAGAGACAGTCACTTAGAAATGAGGGCAGATACATTCAAGTATTCATTTTCTTTTTATAAAACAAGGTTAAAAG chr4 + 94230402 61083067 61083066 61083856 61083067 61083066 61083856 790 TTTTTTCACTATTTTCATATTAACTATTACTTATTTATCATTCCAG-TCACTAAAAGCCTTTGGTTAGAAGTACTTAATATAAATATAATTCACATTA--GAGTCCAATCATACTCATTAAAATTTAAATCAAGATGAACTACTCGTCTACTGAT-GTATTGTGGATTCCTGCAAGTGAATCAGAGCCGTACTTAAGAACTGAATTCTTTTCACTTTCCTGTCATCCTATTACCTTTCTT---------CTGGCACTATTACCCTAGCAAGGATAACATGAAGCATTTTACCTTCCCAGACTGTTGCCATATTCAAACAGCTGTTACTCCTGCCCTAAAAATGAGGTGGATGATAGAAAAAACTTTAGGAAGACATATATGAGGGCAAAAGTTTTACAGCTTTAGTATTACTTACAAATCAATTCCTCTGAGCTGGGGTACCATTAGTAGCTTTTAAGATTGCCTAGAGCTGTGTCATTCTCTTCTGTTTTGACACATTAATGCATTAATGGTATGTGCAGGCTGACATAACTTCTCTGAAGTACTATTACAGTAATTACTAGGAGTCTTCAAAATGACATGCAAAGTTAAGAAAGGTGGC-AAGAGTGTGTAGATACTCAGACACTCTCAAAACATTAATTCAACACTGACAGTGCATAATTAAGAAACTAC-AAAACATTGAGGCAGAAATTGTCTCTTATGTATACTGTCAGAGAAAACAAGCAACGAATGAGAAAGA-AATTATGCAAAAATGATGGCTGATACTATCAAACATAC---CTGCTTTAGTAAGCAGAGGTTAAGAG ..::......x..:xx.....-----..x..:x..x..:....:..-.xx.x......:x...:..x..-----------------:..x:.......--:.:....x..x..:.x.::.x..xx:..--:..xx.:..xx....:x.:xx....-:x....::.x..-----..:..--------------....x.........xx.....x.x.x...::.:.:.:..xx:....:.---------:.xx:.:.::...::..:...::.x..:..x..x...x..::...:x::..:..:.xx.x........:....:......x.x:x........:...:.:..:...---..::....xx:..:x:......x.:..x:.........:............:.................:x...:...xx.:...................:....................x..x..:..................:................................xx...x........:......::.:..x:....x.x:x.....:..........x......:.-......:....:.......:::.:..:::..:....x...:..x.x........x...............:-......:::..::.:...:.:...x:.:x.x.:x:::......:......:.x.:....:.:.:...-.:.:.:x:.:......x...x.....xx....::..x.---:.x:...x:...:xx:.......:.. 21M5I20M1D22M17I12M2D28M2I25M1D12M5I5M14I48M9D106M3I243M1D71M1D67M1D38M3D26M 535/744 71.9% 790/94230402 0.0% 65/744 8.7% 36434608 NA +20313 chr4 + 190214555 97556048 97556047 97556709 662 CAATTTTTAAAACCCCTGAAATGAATGGAGTCATTATTAGGTGTCTCTGAAAATAGCTACTTTGAGTAATAAAAATATTTTTATGGAAGATATAGGTAACATCTCCTACATACATTCGCAGGAATAAA-----GAGCCTTTG-TTGCATAAATATTAGACAAAGCACTCTTCATCTACTAATATATAAGCAAGAAAGTGGTCATTAGAGTAAATGGTGAAGTTACTTAGGTTTACATCAGTAATGCATGGAATTAACCATATTTAATGTTATTGGAGAGGAATGAGCCATCTTCCTAATCATAATCATCTTGATCCAATTCCATCCTTCAGAAATTTTAATTTATCTAACTTATAAGAAAATGTGTTAAAACAAAGGCACTTCACAATATTAGTGCAATGTGCATCAAATGCACTAGAGAAAATTACCTAATACAATTTTCTAAGCCATTTAGTATCATGAACCAGGCACTAAAAGGAGAAAATTGCATTTTATGATTTGGAGGCTGTTGAAAACATCACACACCTGAATTCACACAATCTGCATATTTTTATTCTGTTCTCTCAACAAAAAAACCCAAGTATTTAATAAGCCAGAACACTAACTTGAAGATTTTACTGCATTAAACTAAAATAGAATGATAAA-ACATCTAGCTCTATTTGAGAAACA chr4 + 94230402 61091841 61091840 61092437 61091841 61091840 61092437 597 CAACTCTTGAAAACCACAAAATGTGCAAGATCATCACTA--TGCTTATGCTAATACTGTCACTGACTAATGATAACCATTTTGTG------------AGCATC----------------GGGGAAAAACTTGTGAGCTGATGCTTGCATGACTG-------AAGAAGTTTCCTTCGATGTATAGATAAGCAA--AACCTGTC-TTACAGGGAATGGTGAAGTTACTTGGTTTGTCGCCACTAATACAAAGAATTAACCATATTTAATGT---------------GGCCTTGTTCATAGTGAGCATCCAAT------AATTCCATTGTTCAGAAGCCTTCATTTATCTAACTAACAA-AGAATGTGTTAAA-CAAAAGCACTTCTCTATATTAGTGCAATTTACACCAAATGCACTAGAGAAAATTACCTATTACAATTTTCTAAATCATTTAGTATTATGAACAGGAAACTAAAA-AAGAAAATTACATTTTATGATTTGTAGGCTATTGAAAACACTCTACATCTCAATTCATACAATCTGCACATAATCATTCTGCTCTTTCAATAGTAAAATGC-----TTTCATAATCCAGAGAACTAAAAATAACATT---CTTGACTAAAGCAGAAAAAAATGTTAAGTTCCTCTGACTCTGCACAAGTAACA ...:.:..:...x..x::.....x::::::....:.:..--..::.x..xx....x:xx.x:...x....:.x..:xx....:..------------.:....----------------:..:.x...-----....:xx..-......:.x.:-------...x.x.:.:.x..x.:xx...x........--..x:x...-...x..x:................:.x..xx.::..x....:..x:....................---------------:...x.x...x..:.x.xx...xxx.------........:x.......:::..x............x.:..-.:...........-....:.......x.x.............x.:..:.........................x.............::..........:......x:.:x.......-:........:..............x.....:.........::x:...:..x......:..........:..xx.:......:...:....:.:x....:x.-----...x....x.....:x.....xxxx..x...---..xx.:....x:.:..x.:....x...:-x.x...::....::x::..x.... 39M2D44M12D6M16D9M5I9M1I11M7D31M2D8M1D66M15D26M6D40M1D13M1D104M1D101M5D31M3D28M1I24M 435/590 73.7% 597/94230402 0.0% 79/590 13.4% 36464207 NA +3044 chr4 + 190214555 97568873 97568872 97568928 56 TCTTTTCTTTCTTTTGTTTTTTGTTTTGTTTTTTTTTTTGTTTGTTTGTTTTGTTT chr4 + 94230402 31616242 31616241 31616297 31616242 31616241 31616297 56 TCCTCTCTGTTTTTCATGCTTTGTTGGGTTTTTTTTTTTCCTTCTTTGTTTTGTTT ..:.:...x.:...::.x:......xx............x:..x............ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 65952631 NA +3299 chr4 + 190214555 97568887 97568886 97568923 37 TGTTTTTTGTTTTGTTTTTTTTTTTGTTTGTTTGTTT chr4 + 94230402 75136229 75136228 75136265 75136229 75136228 75136265 37 TGTTTTTTGTTTTGTTTTTCTTTTTGTTTGTTTGTTT ...................:................. 37M 36/37 97.3% 37/94230402 0.0% 0/37 0.0% 22432658 NA +3094 chr4 + 190214555 97580550 97580549 97580595 46 CTCTGTCTCTCTCCCTCTCACACACACACACACAAAGAGAATTATT chr4 + 94230402 12601304 12601303 12601349 12601304 12601303 12601349 46 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTATT ....x........:...........:........x.:..x::.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 84979246 NA +3052 chr4 + 190214555 97585101 97585100 97585157 57 CAAAAAAAAAAAAAAAAAAAAAAACAAAACTACAAGTTAACATCCAACAGCATTATC chr4 + 94230402 5860169 5860168 5860225 5860169 5860168 5860225 57 CAAAAAAAAGGAAAAAAAAAAGATCATAGCTCCAACTTAAAATTCAACACCAGCATC .........::..........:.x..x.:..x...x....x..:.....x..x:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 91724932 NA +3009 chr4 + 190214555 97590631 97590630 97590702 72 ACACACAGACACACACACACACACACACACACACACACACACAGAGAGAAACATTAAAGGACCAACAAAGAA chr4 + 94230402 60987252 60987251 60987323 60987252 60987251 60987323 72 ACAGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGCAAGACTATCAGAGCTATAGAAAA ...x.:.....x.:...:.:......x........::.x....:.:..x..x.:..xx:..x.x.:.:.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 36603379 NA +3225 chr4 + 190214555 97605805 97605804 97605860 56 TAATACAAAAAAAAGAAAAAAAAAATCTGTGTTTAGAAACAAAGAACAAACCCACT chr4 + 94230402 84951831 84951830 84951886 84951831 84951830 84951886 56 TAATACAAAAGAGAAAACAAACAATTCTGTATTTAGAAACACAGATGAAAACCACT ..........:.:.:..x...x..x.....:..........x...xx...x..... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 12653974 NA +11592 chr4 + 190214555 97631274 97631273 97631957 684 GAAATATTCAAGT----GTCATAACTTGTTTAAATTTCCATCAACACAGT---GCAAAAATATTCCTCAGACACTTAGAATCATTTACCAAATGACTTGGACAATGCTTACAAGACTTCGTAACAATTCTGAAGTTAAAATTAG---------------------CTTTTTCAACATTAAAAAATA-TTGGGTTCATGCAAACAAAAAGCTTGAGAATTAAGAATATATTCTGTAATTTTTATAGCTCTCAACTGATACAAATTTTCAAG---------ATCTCTGTAGTTTTAGATAATCATCAGGTTAGTTGAAAGTAAAACAGAACTCTGTGAATTTGTATTTGATG--AGTGATTT------GAAATTCTAAAA-GCACTTGCCCTTAATGGAAAATATTGAAGACACCTAAAGCAAAATTTTGTACAAAGTTATTACACACTAAATGCTCTCACAGCCACCATATTAAAGGAACAAAGCCTGAGAATGTCACCTGGTCTAGCAAGAATGTTTTTGTTAGATTGTGCTAGGTTGT-TGAGTTGTCAGAATAAGATAAATGGAGCTGAGCAGTACCATTAACCTGTGACATTTTTGACAATGCAAGGGTATGTGCTGTGCAAAAAGTAGACTA-----CTTTTTTCTTTTCTATCTCTCAATTT----------------ATAATAGAAATAAGAAAAGATAGATTAAATGTTTTAATGAAAGACAAAAACAGTTAGAAAAAGCTTATCT chr4 + 94230402 61106497 61106496 61107175 61106497 61106496 61107175 679 GAAATATTCAGATTTTAGTCAGAAAT-GTATGAATTTGTG-AAACTCACTCCAGCAAAAATATTTGTCATACAGT---AACCA-----------------------CTGATTAGAAATCATACTTCTTTTGAGGATAAAATTAGTTGCTCGCTACCACATGCTGGCCTTTTTAGCTTACATCAATAATTAAACAAGTGTAATAGAAAGGCTGTAAAATTAAAAATACATATCATCATTTTT---------------CACAAAATCCCTGGCACTGTACCATTCCTATCATTTCAGAT--TTCTAAGGTGAGACTCATTTTCAACAG---TGTATTAATT---ATTTTATGGAACTAAATTAGCCTAGAATTTCTCAACTGTAATTCCATATAAGAGACAATATATTAAAAACTTAATGTTGAATT-----------------ACTGTAAATTCTTTTAACGGGTCCGTATGAAGAGAACAAAGGCTAAGAATGTCACCTATATTAGGAAAGATGTTGTTGCTAGAT-GTACAAGGTTGGGCGAGCTGTCAGAATAAGATAAATGGAGCTCAGTTGTACCATTAACCTGTGACATTTTTGACAGTGGAAAGCTATGCATTGTGAGAAAAACAGAATATGTATCttttttctttttttttttttttttttacttttttcttCTCAGTAACAGAACTAAGAAAGA--AGATACAACGGTCCAATATAAG---AAAATAATGACAAAAGCCTTCTTT ..........::.----....x..x.-..x.:.....x::-x...x..x.---...........:x...x...x.---..:..-----------------------..x.:x...xx..:..x:xx..:...:.x.........---------------------.:....:.:.x.xx.xx....-..::::xx:..:..xx:...:...xx.:......:....:..x:::.x......---------------:.....x.::.x:.---------..::..:.x:...:....--.:x.x....x..x:xx.xx.xx.....---.x.:.x....---....x...--.x.:.x..------...x....x..x-.:.x..x.x:x...x:..x.....xxx.:.x..:...x.:x:....-----------------..xx.....x..:.:.xx.xxx..:...x..::........x..:............:xx:...x..::.....x...:.....-..:.x......x-:...:........................x..:x............................:..x..:.x....:::....x:....::...x..-----............:.x.:.:.:xx...----------------:...:....x.......::--....xx..:.x.::...:x...---....:.:.x.x....:x...x.:. 13M4I9M1D13M1D9M3I22M3D5M23D38M21I21M1I54M15D14M9I18M2D27M3D10M3D8M2I8M6I12M1I46M17D84M1D12M1I96M5I26M16I19M2D22M3D24M 424/610 69.5% 679/94230402 0.0% 143/610 23.4% 36524777 NA +17632 chr4 + 190214555 97670681 97670680 97671153 473 AGCTATGAAACTTTAATATCATCTTCCCTTTTTACAAGTGGTGTGA---TTTTCTGTCATTACCAAGATAGCTTAGATTGGGATATGAAGGCAGATGTACTGACACATTAGATAACCATATACTGTTTAAAGGACACAGGAGTAGCTTCAAAGAAGGGGAATGAAGCTTCACAACAGGTCCCATGTCATGTCATCAATAACAGACCTGTCACACTAATGACTAAGGAAATGCAGGG-AGCTGTGACAATGGGAACATTCATCTTGTT-CTTCTCTGGAAAAGGTGCACCTGTATCCCACTGCACTCTGTCTTCTGCTACCTCCCACCTCCCTGACTTTTGTTCTCCATGACAGTGAATGTGATCGTGAGAATGTGGCCTATCTATCATCCTCTCATCCTGAAAGGCACCTTGACTACAGTTAATGACTGTAATAAGACCAAACAATAGATACAATACCCCAACCTCTTATTTTCAGCT chr4 + 94230402 61125284 61125283 61125732 61125284 61125283 61125732 449 AGCTACCAAACCTAAGTATCCTGGTGTTTTGTTACAAGTA-TATGCCTTTTTTCTGCAAATTTAAGGATAGCATGGCTTAA-CTAGAAAGGCCAGTGTATTAACATGGTAGATGACCACACAATGTTGAAAAGCTGAAAGGGCAGCTTCAAAAAGAAAAAGAAAA---TCAAAGCAGGTCTCATGTCAGGTAATTAATTACAGCATTGTTGTATAAATGACTAAGGAAAAGCAGGGGAGAAGTGACAATAGGTGCACTCATCTTATTACTGCTCTGGAAAAGGTGCATCTGTATCCCCATGCACTTTGTCTCCTGCTG---------TCCCTGACAAGTGTATCCCCTGACAGAGAATCTGATAGTTGGAACATTACCTATCTGTCATCCTTTCTTCCTGAAAGGCACCTTTACTACAGCTAATGACTA-AACAAGAGCAAGCAA--------------CTACCTCCTCCCTCCAGCT .....:x....:.x.:....x.xx.x::..x........:-.:..x---.......:x.x.x:x.:......x.:.x..::-x..x:.....x::....:.:...::x.....:....:.:.x....x...:.x::x.:.:.:.........:.:::::.:x:..---...x.:......:.......x..x..:...x....xx:...:::.:x..............x......-..xx........:..x:..:.......:..-..x................:.........xx......:.....:.....:---------........xxx...x::..x......x....x....x..x:...::.x:.......:.......:..x................x.......:........:-..:....x...:...--------------.x.....:.x::.:..... 40M1D5M3I32M1D83M3D68M1I30M1I50M9D102M1D15M14D19M 323/444 72.7% 449/94230402 0.0% 34/444 7.7% 36545397 NA +3070 chr4 + 190214555 97676524 97676523 97676602 79 AGAAAATAGAGTTGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGGGGG chr4 + 94230402 1500705 1500704 1500783 1500705 1500704 1500783 79 AGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGG ...:..x.:..x...::.:...:.:x..:..:.:.:.....::..:x.:.:.......::.x:.:...x.:x.x.:... 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 96175819 94038736 +3038 chr4 + 190214555 97692230 97692229 97692332 103 CTAATCAAGAAGGCAT--CAGAGAAAGG-------TGA-AGCCCAGCTTAAAGAAATCAAAAAGATGATACAGGATATGAAAAAAAAAAAAAAAAAACCTCAAGTGAAATAGA chr4 + 94230402 79667648 79667647 79667760 79667648 79667647 79667760 113 CTAGACAAGGGGGCAAGACAGAGCTAGGATTAATTTGAGAGCTCAGCAAAGAGAAAAAAAAAAGGTGAGCCTGGGGAAAAAAAAAAAAAAAAAACAACCCACAACAAAACAAA ...:x....::....x--.....xx...-------...-...:....xx.:.....xx......:...xx.x..:x.x:...............x....:xx.:::...:.:. 16M2I10M7I3M1I74M 73/103 70.9% 113/94230402 0.0% 10/103 9.7% 18024582 NA +3230 chr4 + 190214555 97703751 97703750 97703814 64 TATAGTATATTAGCATAGTATATTTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTA chr4 + 94230402 92759681 92759680 92759741 92759681 92759680 92759741 61 TGCAGTACATTGGT---GCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGTA .::....:...:.:---.:.:.......::.....xx.x......:.:................ 14M3D47M 47/61 77.0% 61/94230402 0.0% 3/61 4.9% 4944070 NA +3456 chr4 + 190214555 97707382 97707381 97707463 82 ATGGTGGTGCGTGCTTGTAGTTCCAGCTACCTGGGAGGCTGAGGTGGGAGAATTACTTGCGCCTAGGAGGTCAAGGCTACAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......::.--...............:..::........x:xx.x...x:.....x:..:..:..x.:x:....::.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 21674184 NA +17887 chr4 + 190214555 97714940 97714939 97715537 598 CAGCAACTGATAAATATTTACATTCACAGCTATAACTCATTAAAAGAAAAGAAATTATTCAAATGTAATTGTAGATTT-----CTTTTTATTGGAATTCCTTTGAGGAACATTAAGTGAGGCAA-------AACTTCTCAATATGCATCTTGCTCCATTTTAGCACTTAGCCTGCTTTAAGCTACAGAATATTTTTTAAATAAAACAAAGCCTTATCATAC----TTAGTCTTGAAATACATTTTCAATTACATATGCTATTGCTTATATGATACAGGTCAAAGACTTACATTGCTTCATCAGCTCTCATTCATAGCTAGATTATGCAGAAACTATCTTCTTTTTAGATACCAAAATGTCACATTTTAATCACAGGT-AATAAGGAA-GAAAACTTCTCATTCCAAATCAAACACCTATGAAAAGTC-TGCCTGAATCATGGCTAGTGTATAATGGGAAATTCAAGAGTAGGTGATTCTTATAATTGCATATTTTCCAGCCCTGTGACAACTCAGTCTCTATGAAATGTCAACCAATGCTACAGGGCAAAAATGGAACATAACAGGAACAGTGAGTAATTTAAAATAAAAACCTATGTTTCTGTCCCTTCAATATGA chr4 + 94230402 61139614 61139613 61140206 61139614 61139613 61140206 593 CAGAAAATTATAATGAATTACTTTT-TGGATGTAACttattttaaatatatatactat----atatatttatatattttaaatCATTCTCTCTGTATT-------AGATGATAAAAAAAGACAATTTGACAAGCTGCTTCATGT-TATTTCTCTCTCTTCTA-CATTATAATTGCTTTAAAATATTAAGCATT--------AAAATGTCTCTGTATTCTACAGATTTGATCTAAGAATATATTCTCTATTATGTTTGCTGCCACTCGCATGATACAGGTCAAAGATCTGTGTAGCTTTTCAAGCATAACTTCCATGTTGAATTATGTAGAG--TATCTTCCATTTATTTACTAAAATGCCACACTTTAATCACAGGTCAATGAAGAATAAAAACTTCTTATTGGAAATCAAATGCCTTGGAAAAGGCATGTCTGCATCCTGACTGACATATAATGGGAAAATCAGAAGCAGGTGATTCTTATAATTTTATATTTTCCAGTTGTATGGTAATGCACTCTGTATGAAATGTCACCCAACGCTACAGGGCATAAACAGCAGAGAACATGAGGAATGGGTAATTTAAAATGAAAATCTGTGCTTTTGGCTTCCCAGTCTGA ...x..x.x....xx.x....x..:-::.x.:.....:...xx..:x.x.x.x.:...----..:..x..:..x....-----.x..:.x.:x.x...-------:..xx..x..:x:..:...-------.:..x..:x..:.-:..:.:x...:x..:..-..:.xx:x:........:x..:x:.::...--------....::xxx.:x...:x...----..::...x::....:...:..x....::.x....::::..:::.................::.:::.x....:x:x...x:xxx...xxx.:.::......:...:--.......:x....xx...:......:....:.............-...:.:...-:.........:...xx........::...xx......x.-..:...x...x..:..::::............x...::..:.................x:...........::x.:..::..:x..x...x............x....:...........x...::.x.x.x....x..:x.:..:............:....:..:..:..:..x.::::..:.x... 25M1D32M4D16M5I15M7D19M7I13M1D17M1D30M8D20M4I106M2D44M1I9M1I39M1I189M 393/574 68.5% 593/94230402 0.0% 43/574 7.5% 36575326 NA +3566 chr4 + 190214555 97721204 97721203 97721298 95 CTCAAAAAGAACAGTCATGTTTGCTGTCTTTTTTGAAAGCTGAAGTCATTATTCACTTTACACGGAGTGACCTCTGCTGGTCAGAA--------AGACACATA chr4 + 94230402 61143246 61143245 61143348 61143246 61143245 61143348 103 CTCACAGCACATAATGAAGTTCATGACTTCTTTAAAAAGATGAAAGCATTGTTCACCTTACCCTGAGTGACCTCTGCTGGTAAAAATAGTTTACAGACACCTA ....x.:x:x.:.:.x.x...:::x:::.:...x:....x....:x....:.....:....x.x.................x.:..--------......x.. 86M8I9M 66/95 69.5% 103/94230402 0.0% 8/95 8.4% 36577958 NA +24676 chr4 + 190214555 97721681 97721680 97722441 761 TATTTATACAATAAACATATGACTTGTTACAGCTCAGAAGTAAA--GAATTTATTTAGCTAAGTAATACAGTTACAAAAATTACATTTAC---CTTCTCTAAAACAGAACATGGTACACATCAGAAA---CTGTAAAACCTAATTAGGAGACAGTATCC---AGAG-----ACTCAGAG------TAAACATTT---AAACAACCAATATCAAAATACTCTTTTTAAAACATATATCACTGCAAAAACTGTGCAGATTGTTTTTCTTTATAATTTTAATAGAGGTCACAACCTTTGACATGAAATATATCAATAAAAACACCAAAGAATGTTGC-CTACAAAAATTTTTTATTAAGAAAATTATTATATATCCTGATTGCTAATTATCACAATGTCCCCCTCCCCTCCTTTTTTTTTCTTTTTAACAATGTCCAGGAGGGGAAAAAAAAAAAAAGAAGCATATTTGGTCTTTGCTTCAGCAAATACTGAAATCTATTTATATGCAAATAAGCTATCCATGATTAGTATGAGAAAAGACTTGTGTATAAATGA-GACATAAATTATCACTAGAAGCCATTAATGAAATCTATTTCAAAACATAACATTTTACAAGAGCCCTCACTCATGTAATATTTGCTTAAGCCTGGAGGGGAAATGGTGAGTTCTACACTTAGATGAAATCTGATACTACATTATTTCCCATGCCAATATGTTTTATAAAATGAATTTATCCTTTCCTTAAAAATGACTGGATAATTGTAACTCCAGTCTTTT----TAGAGAACTTCAT chr4 + 94230402 61143561 61143560 61144280 61143561 61143560 61144280 720 TACTGACATATGAACCATATGCTTGG----AGATTACAACTAAATCGCATTTGTTT-GCAGAGTTATGTTTGCATAATAAGAATATTCACAAACTTCTC--AAACAGAA-ATGGCA------AGAAAGCACAACAAAATATTACTTGAGAACAGGCTCCCAAAGAGCTACCACTTTCAGCATCTATAAACATTTCTGAAACAAC----ATGAAAACCATCTTTATAAAAT----------------------CAAATGATTTCTC---ATGTTTTGGATATTATAAACAACATCTAAACTCTGAAGTATTCACAAAAGTGTCACGGT-TGATGCACTCTAAAGAGTTTTGACCAAGAAAATTATTACAATTCATGGCTGCTGATCACTGCAATATTC----------------TATCTTATTTAACAATGTCCACGG-----------AAAAAAGAAACATATTAGGGCTCTGCTTCAGCAAATACTGAAATCTATTTATATGCAAATAAGATATCTGTTATTAGTATGAGAAGAAACATCAGCATAAAGGAAGAAATAAATTATCACTAGAAATCCTAAATGAAATCTATTTCAAAACATAACATTTTACAAGAGCCCTCACTCATGTAATATTTGTTCAAGCCTAGAAGGGAATTGGTGAGTTCTGCACTTAGATTAGAAATGATACTACATTATTTCCCATGACAATTTGTAATATAAAATGCATTTA-CCCTTCCTTAGGAAAAACTTGATAATTGTAAACATACTTTTTCCCTATAAAGAACTTTAT ..:.x.:.:.xx..x......x:.x.----..x.:.x..x....--.x....:...-..x:...x..::xxx:.:..x..xx.:...:..---......--........-....:.------.....---.x::....:x.x.:.x.:::....xx...---....-----...:xx..------.........---.......----..x....:xx.....x.....:----------------------..:..x:...:..---..:x...x:...xx:xxx.....x.:.:.xx.xx:.x:...:x.:....::::..x:.x-..x...-..x:...:.x....x.::.............:.xx..x..::....:..:.:::....:.:.----------------.x.::.x..............x.:-----------.........:......x..x..:........................................x....::.x.............:.:..x.xx.:.....x..-..x.................::.x.x..........................................................:.:......:..:.....x...........:.........x.:.xx......................x....x...xx.........x.....-..:.......::..x:...x...........x:x:.x.:...:----..:.......:.. 26M4D14M2I10M1D33M3I6M2D8M1D6M6D5M3I29M3I4M5I8M6I9M3I7M4D22M22D13M3D59M1D6M1I62M16D24M11D104M1I178M1D43M4I13M 524/689 76.1% 720/94230402 0.0% 103/689 14.9% 36578120 NA +3226 chr4 + 190214555 97735561 97735560 97735667 107 ACATATTTACATTTATATATATGTATATATTTATATATTTATATTTATACATTTATATTCATATATATATACACACACATATCTACAGATGTGTATATTCTTATAAT chr4 + 94230402 22303518 22303517 22303611 22303518 22303517 22303611 94 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATT----------TGTATGTACGCACAAATATATATAGTTGC---TATTTATAAAAT .:..x....x.x....:..::.x....:...x..x.........x:.x.....----------.:...:...:....x....x..:..x..:---....:x..x... 53M10D29M3D12M 69/94 73.4% 94/94230402 0.0% 13/94 13.8% 75432043 NA +9895 chr4 + 190214555 97745134 97745133 97745533 400 TATAAATTACGAACTTGTATTGATACTTCAAAACGTGAGTCTAAGCTAGAACTACTTTCAGTCAAATTT-AAGTCATTATTACCTTTCTTTCAGAAACCATGGCATAAAACTAAAAAAAAAACAAAAAAACAAAAAAAAAAACAATTGCAGAAAAGTGCCCTAAATTGGTCCAATAAATCAAATTCAAATCAATAAAAAGCAATTATGACATATTTAATTTTATTCCATTTTAAATCAATCTATAAAATTCTGTGTTAATCTCTCTACAGAAGATAGCCTTAAAAA---------CTAAAGATACTTTTTCCTCTTCATTTCCCCCTTAGTCTACTGATTTTAGAAAATCATTTTTTATATTCATTCACAAGGACTTTAAACTA---TGCTATAATTATGAAATATCACAGCT chr4 + 94230402 61146228 61146227 61146606 61146228 61146227 61146606 379 TATAATTTATAGATTCATAGTAACATCTCAAAAACTGGGCTTTTGCCAATACTGCTTTCAGACAAATTTTCAACTGTACCTACCTCTGTTTCCAGTATC----CATAATATCAAAAGAAGAATAAAAAGAACAAGAAAAAAAT-----------------CTTAATGGGTCTAATAAATCAAAATCACATCAGTAAAAAGCAATTACAGCACACTTAACTTCATACCA-CTCAAGTCAATCTTTAAAATTATGTGTTAATTTCCTTGCAAGTGGTA----TAAAAAAACCCAACCCTAAAGGT--TTCCCCCAGTGCACCTCTTTTTTGACCTTTTCA-TTGATCAAATTA--TCCCATATTCCCTCAAAA--CCTTTTGACTACAGTGACACCATTA-GAAAGGCCACAGCT .....x...:::.:.::..x.:.:.::......xx..:.::.xx..:.:x...:.......x.......-x.::::.xx:.....:.x....x::x.:.----.....x.::....:..:..:.....:.xx..:.......:-----------------..x...x....:...........x...x....:.............:::..:.:....:..:..x...-:.:..:.......x.......x.........:..::.:..::x.:..----......---------......:.--..:::..xx.x..::..::::..:::..x:.x.-..x.xx....:.--.:::......x:...x..--x....x:....---..x:.:x....-....x::....... 69M1I29M4D40M17D68M1D47M4D6M9I8M2D33M1D12M2D18M2D11M3I11M1D14M 250/366 68.3% 379/94230402 0.0% 47/366 12.8% 36598906 NA +22394 chr4 + 190214555 97790925 97790924 97791541 617 TCTACAAAACCAAAAGCTTATAGCATTCAGTTTTTCAGCATTCCTAATATTCCATCAGTTACGCAAATTCTACCAAACTTTTGCATACTCTCTAAGTAATCCTGGGAGTTCAGTTTATGTCCCTACTCTGAAAAAGCAAAGCAGA---CTTCTGAAGGTGTGTTTTCATTATTTCTTACTGACATAGGTTCATTTGAATTTGTATTTAATAAAACCTTGTGGGTAAGGTATGAGAGCTTTTTGGAAAAGGTGCAATGAGATGGAAAACTGTCTTTTTGAACTTTTTCCCACACT-----AAAAAAAATATATTGTATAGTTCAAACATATAGGAATTGTTACAATCTCTGAAAGCATGTACCCTGCAATGAATTTAATTTAATTTCTACAAAACAACTTGACTGGAAAACACAGTTCAGGAGGCCATGCTGAACAATGAATTTCATTTATAGTGAAATAAAATTGC-TACGAGTATGACTATAATCTGTACTTCATATATGACACT--GATGTTACAATTTTTTGTAACATCATTTTTCTGCCTAGCACTAAATGAAATTTTAAAGTTGTCAAAG-----TCAGA------AATACTTTAGAATACAAATAATCCCTGTGAAATATAGTTTATATATTA chr4 + 94230402 61159962 61159961 61160579 61159962 61159961 61160579 618 TTTACAGAGAGAAAGCACTATA-CATTCA------TAGCACTTTAAATA---CAGCTATTACTCTAACTTCACAGACCTTCTGCCAGAGTTCTAAATAATCACAGTGGTACAACATTTACTCCTACTAGCAAAGAGCAAAGCACAGCACCTCTGTATG---ATTTTGATATTTCCTTTCTGACATAGGTTCACTTCAATTTGTATTCAATGAAATCCTGCCACAGAAGTATGAGGACTGTTATGAAAAGAAGCAATGAGGTGGAAAACTGTCTTCT-GAACTTTTTCTTACACTGTGAAAAAAAAAAGTCATGGTGTATTTCAAACAAATAGGAACCGTTACAATCTCTGAAAGCATGTACCCTGGAATGAATTTAATTTAATCCTTACAAAACAACTTGAGTGGAAAACACAGTTCAGACAATGATACTGTACAATGAATTTCATTTACAAAGAAATAAAATGATGTACCA-TCCCACTGTAATC---ATTTCTTGTACTCTACTGCGATGGTATGA--GTTTATAGTACCATTTTCTCTCATTGTAGTGAATACAATTTTAGAGTTGTCAAAAATGATTTAGATTGACTTATGATTTAGATTGCATTTAACCCCT-TGACAAATAGTTTGTATGCTA .:....:.:xx...:xx:....-......------:....:.::x....---..x.x:....x.x..:.::..x:.x...:...xx:xx:.....:.....x::.x:..x..::x.x.:::......xxx...:.........x.---.:....x.x.---:....x..xx..:...x..............:..x..........:...:...:.:..:x:xx:.:.......::..x..xx......:x........:..............:.-..........::.....-----........xx:..x..:..x........x.......::............................x.................:::...............x.................:x:::x..:...x.................:.:x..........x::-...x.-.x:x...:.....---.:...x.:..:xx:...--....x..::.--x...:..::.:......:::x.x.x.:.x.:...:x.......:..........:-----.:...------x..:x......x.:..xx...:....-...x.x.......:...::.. 22M1D6M6D14M3D93M3I10M3D115M1D17M5I167M1I5M1D13M3D17M2I10M2D55M5I5M6I26M1D21M 437/596 73.3% 618/94230402 0.0% 43/596 7.2% 36630963 NA +3800 chr4 + 190214555 97816688 97816687 97816882 195 TCAATCTATCTTCCTTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCTCTTTCTCTACCTTTCTTTCTTTCTTTTTCTTTTCTTTTCTTTTTCTTTCACTCTCTTTCTGTCTCTCTCTCTTTCTGACCCTCTTCCTTCCT--TCCT------------------TCCCTTCCTGCCTT--CCTCCTTCCTTTCTTTCTCTTTCTCTTTCACTCTTTCTT chr4 + 94230402 67728279 67728278 67728495 67728279 67728278 67728495 217 TCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTT ..x::..:.........xx:.:...:x...:...x.x.:.x:x:......:.:.x..::.x:x:.:....:x.x:..:..::.x.::x.::x..xx:x...:.x..:::.::.:.x::.....x...xx...:.....--....------------------...xx....x....--.::.:..::....x.:.x.:.:...:.xx...x..:... 138M2I4M18I14M2I39M 116/195 59.5% 217/94230402 0.0% 22/195 11.3% 30088409 NA +8766 chr4 + 190214555 97819253 97819252 97819503 251 GAACTGCA--TTTTGAAACACTTTCTAGTACTTCTGAAGCTAGAATATTATAAGTCACTGAGAAAACAGAATAAATAATTAATTTTTACACAACAGTGATTTTTACATCAAAGGTATTATTTATGTTTATTG-AAAAAGTGAGCAAAACTACCTTCATGAGATATGTTCAATTAACTTCTAAGATAAATTATACCTGTTTCCTAAAATAATTTCCTGTGGGAATGTGATACGGAAATCACAATGTTATTTTCAT chr4 + 94230402 61180102 61180101 61180339 61180102 61180101 61180339 238 GAACTGCAATGTTTTAAAAACTCTGCAGTGTTTCTGAGTGCACACTATTACATTCCAACAAGCAAGGAGGAGAAATAATTAGTTTTCACACAACACTGACTTTAATATCAAAGGTACTGCTTGTAGTCATTGAAAAAAGTATGCAGAAATACTTTCATGTGATACGTTCAGTTAATTTTT--------------CAGTTATCTGAAGTAATTTATTTTAGGACTGTG--ACTAGAAACAAAATTACATTTTCAT ........--x...x...x...:.x:...::......:xx:.x.x.....:.xx:..x::..x..:x..:.x.........:....:........x...:...x.:..........:.::..:.:x.:....-.......:x...:..x...:......x....:.....:....:..:.--------------.x...x:..:..:......x:.x.:...x....--..x::..x..x...xx:........ 8M2I122M1I47M14D33M2D25M 168/235 71.5% 238/94230402 0.0% 19/235 8.1% 36639151 NA +3305 chr4 + 190214555 97819959 97819958 97820022 64 GGTTTTTTGTTTTTTGTTTTTTTTTAAATTGAAGGTTTGTGGCAACCCTGCATTAGCAAGTCTA chr4 + 94230402 16888440 16888439 16888503 16888440 16888439 16888503 64 GGTTTTTTGTTTTTTTTTTTTTTTTGAATGAGAGGTTTTCAGAGAGCTGACAGTAGCCAGTCTA ...............x.........:...x::......x::.x:.x.:x:..x....x...... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 80931519 NA +3148 chr4 + 190214555 97852907 97852906 97852990 84 ATTTGAATTGTAGGAAATCTAATTATTCTACATTAATGTTCCTATAAATTAACATATTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 28615106 28615105 28615189 28615106 28615105 28615189 84 ACTTGAATGGAGGAAACTGTAAATCTTATACTCTAATCAAATTAGAAATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTT .:......x.x:.:..x.x...x.x..x...x:....xxxx:..x....:..:..x.:..:.:::...:............... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 69237801 NA +3180 chr4 + 190214555 97853969 97853968 97854008 40 GTTTTGTGTGTTTTTTATTGTTGTTGTTTGTTTGTTTTTT chr4 + 94230402 27444621 27444620 27444660 27444621 27444620 27444660 40 GTTTGGTGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT ....x....x......:....................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 70409348 NA +3029 chr4 + 190214555 97853970 97853969 97854017 48 TTTTGTGTGTTTTTTATTGTTGTTGTTTGTTTGTTTTTTAAAGATAAC chr4 + 94230402 18301259 18301258 18301306 18301259 18301258 18301306 48 TTTTTTCTGTTTGTTGTTGTTGTTGTTTGTTTGTTTCTCCAAGATTAC ....x.x.....x..:....................:.:x.....x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 79552711 NA +3128 chr4 + 190214555 97853970 97853969 97854011 42 TTTTGTGTGTTTTTTATTGTTGTTGTTTGTTTGTTTTTTAAA chr4 + 94230402 66252775 66252774 66252816 66252775 66252774 66252816 42 TTTTGACTGTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTAAA .....xx........:.....................x.... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 31601195 NA +3318 chr4 + 190214555 97873178 97873177 97873252 75 TCTCTCCCTCCCTTCCTTCCTTCTTTCCTTTTTTCCTTCCTCCTTTCCTTCCCTTCTTTCTCCTTTCCACATTTA chr4 + 94230402 33980830 33980829 33980904 33980830 33980829 33980904 75 TCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCCTATCCCCATTCA ...:.::x.:.:x.....xx....x.....:x......:..:..x.x......:..::.:....x...x....:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 63892348 NA +7876 chr4 + 190214555 97891206 97891205 97891523 318 AAAGTTATTACTTAATCTCACTTTGTGATCATTAAAAGTTTATCTGTATAAGAACATAAGTTCTTAAAAATAAGTAAATAAATAAATTGACTTTTATAAAAGAAAAATGTGAGAAACTCAATCAGCTGGAAGCTAAAAACACATGCCAAATTCTCACTGCTATAAAGGTTATGAGAGAACTTTGTGTA-ACAGACAT---TTTGAGAACAGTAATAT-CTCTCACTTTTCA-TATATTCTCCTG-AGTGCATGTTTAAGAAATAAAGCTTTATTTACCAAAGCAGGTAACTAAAAAAAAATGATATATCTAAATAGCAAGAACAA chr4 + 94230402 61195419 61195418 61195714 61195419 61195418 61195714 296 AAATTGATTACTGTGTCTCATTTTGTGATAGTCTCAAATTTATCTGT----GAACATAAGTTCT---------GTAAA-AAATAAATTGACTTTCTAAACAGCAAGATGTGAGGAACTTAAGCAGCTGGATGCTAGAGGCACATGCCAAATTCTCAATGCATCAGATTTT------GATTTTTTCATAGATTGACATATGTTTAAGAGTAGAAATAGATTTTAATTTTTCACTTCCTTTTCATGCAGTG-ACGTTCAGATAAAAAAGGTCCTTTAA-------AGATACAGAAAGCAAAATCAGATCTTGAAGTA-CAGAAACAA ...x.x......xx:.....:........x:.:xx..:.........----.............---------.....-...............:xx..x..x..:.......:....:..x........x....:.::.................x...xx:.:.xx..------..x:...x::..-.:x.....---...:...::..x....x-:.:.x.:......-.x:x..:..x..-....-.:...:.::x..x....x.::x..x.-------..:..xxx...:x.....x.x..x.:x..:..-..::..... 47M4D13M9D5M1D91M6D12M1I8M3I17M1I13M1I12M1I4M1D26M7D32M1D9M 211/289 73.0% 296/94230402 0.0% 36/289 12.5% 36695787 NA +3117 chr4 + 190214555 97909073 97909072 97909137 65 CATCAAGCCCCAATAAACAATCAAAAGGCAAACAAACAAAAACAAAAACAAAAACAAACAGAAAG chr4 + 94230402 14725846 14725845 14725910 14725846 14725845 14725910 65 CAGCAAGCCCTGGGAAAGACTTAAAAAACAAACAAACAAACACAAAACAACCAACAAACTGAAGG ..x.......:::x...x.x.:....::............x......xx.xx.......x...:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 83183227 NA +3469 chr4 + 190214555 97931621 97931620 97931695 75 AAAGATGTTGGCTT-----GAAGTTT-TTTTGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTTTTTA chr4 + 94230402 65286660 65286659 65286740 65286660 65286659 65286740 81 AAAGTTGTTGCCTTTTGCTGGAGTTTATTTTAGTTTAGGTGTTTTTTTTTTTTGTTGTTGTTGTTGTTTTTAACTCTGTTA ....x.....x...-----.:.....-....:x...x...x.....x......................x.x::.:.x... 14M5I7M1I54M 61/75 81.3% 81/94230402 0.0% 6/75 8.0% 32644961 NA +3262 chr4 + 190214555 97931639 97931638 97931710 72 TTTTTTTGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTTTTTATCTTTTTGTGTGTGT chr4 + 94230402 85507655 85507654 85507726 85507655 85507654 85507726 72 TCTTCCTTTATGTGGTTCAACTGTTTTTTGTTGTTGTTGTTGTTGGTTAATTTCTTCTCTTCTTTTTTAGGT .:..::.x.x.x.....:xx:.......................x...:x...:..x....:..x.x.:x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 12423984 NA +3485 chr4 + 190214555 97931645 97931644 97931716 72 TGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTT------TTTATCTTTTTGTGTGTGTGTGTGT chr4 + 94230402 44646903 44646902 44646980 44646903 44646902 44646980 78 TGTGCTTGTTTTGTTGAATTTTTTTTGTTGTTGTTGTTTGCTTTTTTGGTGGATTTTTTTTTACGTGTGTGTGTGtat ...x:...x...x..x:x.....x................:.x....------...x.:...x:............:. 47M6I25M 57/72 79.2% 78/94230402 0.0% 6/72 8.3% 53284742 NA +3298 chr4 + 190214555 97935196 97935195 97935262 67 TGATATCCTTTTTATCACTTTTTATTGTGTCCACTTGATTCTTCTCTTTTTTCCTCTTTATTATGCT chr4 + 94230402 23761734 23761733 23761800 23761734 23761733 23761800 67 TGATGTGCTTCTTGGTGCTTTCTTTAGTGTTCACCTTATTATTATTTTTTTTCTTCTTTATTAAGCT ....:.x...:..:x::....:.x.x....:...:.x...x..x.:.......:.........x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 74173462 NA +3103 chr4 + 190214555 97955143 97955142 97955249 107 ATTAAATTATAACTCAGTAGGAAATATCTAAACTGTAGCATGAAAGCAAAAAAAGTTGTAATACAGAAGAATTTTTTTTTTTTTTTTTTTGAGACAGCATCTCACTC chr4 + 94230402 63363795 63363794 63363901 63363795 63363794 63363901 107 ATTCAGTTATCAGACAGATGGAATTATATTATCTGTAATGTGCAACTGGGATGGTTCTTAATGCTTAACAAGTATTTTTTTTTTTTTCTAGAGAAATCATCACATTC ...x.:....x.xx...xx....x...x.x.x.....:::..x..x::::.x::x.:x....:.xx..x..x.x.............:.x....x.x....x..:.. 107M 69/107 64.5% 107/94230402 0.0% 0/107 0.0% 34591348 NA +8460 chr4 + 190214555 97981139 97981138 97981333 195 TATATAGATAAATTGCTAACCTGGCATTTCCTCTGTCCTGATGTCCTGTGTGAATCGAACAGCACTTTGACCAAATGGAATATTTTTCAGTCCTGATGTTTTCTTCAAAGACTTGAGAGCAGTTCGAGGTTCATTATATGTGCCAGGAGCCGGGGTGATTGATTTCATAGGTAAAAATCTCTAGTGAAGAACAGG chr4 + 94230402 61208532 61208531 61208726 61208532 61208531 61208726 195 TATTTGGATTAATTGCAAGCTTCTTGTTCTTTCTAGCCCGTAGTCATGAGCAAATCAAAAAGCAGTTTAACCAAATGCGATCTTTTTCATGCTTAATGTTTTGCAGAAGGACTTGAGAGCTATGTGTGGTTCATTGTATGTGCCAGGAGTTGGTACAGTTGATTTCACAGGTAGGAAACTCTAAAGAAGCAGAAG ...x.:...x......x.:.:.xx::..:::...:x..:.xx...x..x.::....:..x....x...:........x:..x.......xx.:.:.......x:xx..:...........x:.x:.x........:.............::..x::::.........:.....::..x.....:x....x.x.:. 195M 135/195 69.2% 195/94230402 0.0% 0/195 0.0% 36772607 NA +3464 chr4 + 190214555 97991266 97991265 97991344 79 GTGTATATATACACACACATATATACATATATACGCACACACACACATATATATACA-----CACATACACATATATATATGTG chr4 + 94230402 23247724 23247723 23247807 23247724 23247723 23247807 84 GTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ....:...::.......:x...:x......:...:....:.......:.:.x:x.x.-----:....:x.:.x........:.. 57M5I22M 57/79 72.2% 84/94230402 0.0% 5/79 6.3% 74743542 NA +3176 chr4 + 190214555 97991296 97991295 97991351 56 ATACGCACACACACACATATATATACACACATACACATATATATATGTGTGTATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x.:.............:x.:.......x...:.:.::.........:.x..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 23465222 NA +3331 chr4 + 190214555 97991424 97991423 97991482 59 CTACTCAGT-----GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTATATATAC chr4 + 94230402 79265505 79265504 79265568 79265505 79265504 79265568 64 CTATTCAGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACAC ...:.....-----.............::........xx........:...:.:..:.::.:.. 9M5I50M 47/59 79.7% 64/94230402 0.0% 5/59 8.5% 18725919 NA +3337 chr4 + 190214555 97991429 97991428 97991500 72 CAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTATATATACCACATTTTCTTTATCCAC chr4 + 94230402 79265517 79265516 79265588 79265517 79265516 79265588 72 CAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCAC ...............::........xx...:....:...:.::...::.:.::.x.xxx.x.:.x.:..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 18725912 NA +3050 chr4 + 190214555 97994037 97994036 97994113 77 TTTTTTGTTTCATTTATCTTTTGTATTGTTTTGTTGTTGTTGTTGTTGTTTCAATTCATTTAGTTCTGCCCTGATTT chr4 + 94230402 85353583 85353582 85353659 85353583 85353582 85353659 77 TTTTGGGGTTTATTTTTTTTCTTTATTATTTTGTTGCTGTTGTTGGTTGGTTGGTTGGTTTAGTTGGGTCTTTATTT ....xx.x..:....x.:..:.x....:........:........x.xxx.:::..x:.......xx.:.:.x.... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 12640454 NA +3342 chr4 + 190214555 98073598 98073597 98073669 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATTGCTTGAATCTGGAAGGCGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x::......:.::....x:xx:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 22040392 NA +19216 chr4 + 190214555 98079235 98079234 98079795 561 AAATATTGTTCTCACACCATAGTAGGCAAATGTGGATATGTATCCTGTATAG---GATGACTTTGCATGTCCTCCAGGTAGGCCCAAAGGGCAGTGTTGGCAATAATGATCCATCTGTTCACTACTGACAATGATAAAACTTCTAATGAAGACAGATGTGGGTCACCCAGTATAAGCTGGCTGCAGGGTGTTAATGAATCCTCCTAATGGTCACTACCTGCCACTTTTGACTGACTGATAACCTAAACAGTTTAATTTGAAAAGCAAAGATGAGTATTTCAGGTACTCATTTGTCCTACCAAGAAATTCTTTTCACTTTC--------ACTTACATACTCACTCT----TTACTACTTCTCTTT-----ATTAATTCTTAAACAATATTACTATTGTTTATTAGATTGTCTTTAAAAATAACCTTGCTAGCAT-------------TTTTGAGAAATTAATTTCTCCAAAACTTCTCCACTGACTGGC-CCACAAGATATCAACTTCATAATGTGATAT---AGCAATATTCCATAT--------GAGAAACAAA------AAAGGTAATATTTTCTATGTCATAAAACTCTTTAGGTACATTTACATGTAA chr4 + 94230402 61224670 61224669 61225267 61224670 61224669 61225267 598 AAATATTTTGGTCAATTTCTACTAAGTAACTGTGTATATGTGTCCTGTACAGAATGATGACTTTGCCCGTCCTCCAGGTATGCCCCGAGGGCAATGTAGGCTATAATGACCCATCTGTTCACTACTGGCAACTAGAAAACTACTAATGAAGACAGATGTGGGTCACCCTGTACAAGAAGGCTGCAGGGTGTTAATGAATCCACCTAATGGTCACTACCTGCCACTGCTGACTGATTGATGAGCAAAAGGGTTAAGCTTCAAAAGCAAAGACAAGTATTTCAGGTAATCATTAGTCTTGTTAGTGTATCTGTCACACTCCCTAGTATATACATACACGCAAACTTTAATGTTGTGATCTCCCGTTTCAAAACAAAACGTAAAAAGCTTCTATTATTTTTCTTTGGACAGCCT---GAAATATCCTGAAAACCATGAAAGAAAAGACCTTATGAGAAATTCATTAC----------CTTTACTGCCCAGAGAAATAAAGAATCCAATATTCAAGGTAATGTTTAAACAAGATACCTGATACTAACTAGAAAAACAAAAATCTTAAAGGAAATAATTACCA-GTTGCAAAATTCTATAGGTACTGACACTTATAA .......x.xx...xx::x..x..:.:..x....x......:.......:..---...........x:............x....x:......:...x...x.......:.................:...:x.x......x..........................x...:...xx.......................x.......................x:.......:....:.x.x...x:...x.::..x...........::.............x.....x...:.:::.:x:x..::x.:x....::.--------..x....::.xx...:.----..::x.::..:.x..-----.:x..x:x.x...x:x.x:..:....x..:x..:..:x.:..---:.....x...x:xx.x...-------------..x.........x...x.----------..::....x.::.x-xx.:..::x...x.x.x:x:..x..:..:.---.:...x..x..xx..--------..:.......------.....x....x..x.:.-..:::....:...x.......xxx:..x.:... 52M3I265M8I17M4I15M5I42M3D19M13I18M10D14M1I30M3I15M8I10M6I17M1D33M 398/547 72.8% 598/94230402 0.0% 65/547 11.9% 36854565 NA +3068 chr4 + 190214555 98082436 98082435 98082505 70 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCGCCCAGGCTGGAGTA chr4 + 94230402 80507630 80507629 80507699 80507630 80507629 80507699 70 TTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTTCCCCCAAACTGAATTA ...xx...:.x:..::.:...x:.x..::..............x.:......x..x....::...:.x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 17574806 NA +3112 chr4 + 190214555 98100635 98100634 98100674 40 TTCCCAAGTCATATCTTCTTTTTCTTTCTTTTTTTTTTTT chr4 + 94230402 86464157 86464156 86464196 86464157 86464156 86464196 40 TTCTCAAGTCATATGCTTTTTTTCTTTCTTTTTTTTTTTT ...:..........x:.:...................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 11636478 NA +3218 chr4 + 190214555 98100643 98100642 98100708 66 TCATATCTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGAGACAGAGTCTTGC chr4 + 94230402 31646082 31646081 31646147 31646082 31646081 31646147 66 TTATGTCTGCCTTTTCCTCCTTTTTTTTTTTTTACTTTTTTGTCTGCTGCTGTGCAAGAATCATGC .:..:...x.:.....:.:..............x:......x.:..:.x:..x.xx...:..x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 66454561 NA +3866 chr4 + 190214555 98103501 98103500 98103583 83 CATGGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGCAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--....:.:...........::........x.xxxx...x.:...........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 22070304 NA +29545 chr4 + 190214555 98114821 98114820 98115404 584 ACATGAATTGACAAGTACTTAACTCATTAACCTCTGCGGTACTCAGGTAGA-TGTTGAATCAGAAAT-----TTAAAAGGCTTTTAAAAATACAGACAGAAAACAAAGGATAAATTGATGCACTCTTATC---TCTAAATTACAGTTTCTTTTATGTCAAGAAGTGTTGGCAATACCAACTTCAAGGTCACTGTCAATTTTGAAAATCATTAGCAAATAAAATATGACTTAATTGAAGCAAACTCAGCATGGAACTGCATTATTTTAAGTAAATGCTATATTATAATTTGAAGAAGAATTACTAACTGCCACTCTCACTGACAATTAAATAAATGAAGATGGGGCTATGCAACTTTCCCCCATGTCTTT-CCATAATTAAATATGGAAATAGAATTTGTGAAGAATTAAAAGGCCCAAAGTGCAATAATTCAAACACTAATGAACTGTTTTCCAGTGTGGCAGCACACAGGTAGTTCCCAGCATGTTAT---CATTAGCAAATATGTCAGTATCATCATTCCAATCACAAACTTTGCTTGTGAAATACACCTCTGAAAAATAGATTTCTAATAGTTACCTGGGCTCTTCTAAAAGAA chr4 + 94230402 61239014 61239013 61239608 61239014 61239013 61239608 595 ATATAAATTGATTGTTACTTAACTTACTAACCTGTACATTATCCAGGTAAAGTATCTTATCTGTAATGGAACTAAAAAGCTTTTTAAAAACACTGACAAAGGCTGAAGAATAAATTGATGCACTCTTAATAATGCTAAATCACCTAATGCTTTATGCCAAGAAGTGTTGACAATACCAACTTCAAGGTCATTGTCAACTTGGTAAGTCATTAGCAAATAAAATATGGCTTAATTGGAGCAAACTCAGCAAGGAGCTGCATTATTTTAAGTGAACACTGCAATATAACTTGAAGAAGAATTAGTAATCTCCACTCTCGTTGACAATGAAATGGATGAAGAAGGTGCTTTGTAACTATTCTCTATGACTTTCCCGTAATTAAATATGGAAATAGATTCCGTGAAGAATTAAAAGTCCCTGAGTGCATTAATTCAGGCACTAATGGACTGCCTTCCAGTGTTACAGCACACAGGTAGTTCCCAGCATGTTACCAACATTAGCTAATAGATCAGTGTCAG-ACACCAGCAGTACTCTTAGTTTG-AATATCCTATGCTGTAAAGCAGGTTTAGGCTGATTACACACGCTGTTTTAAAAGGA .:..:......:x:x.........:.:......x.:.:x..::......:.-.:.:xx...x.x...-----.x.....x:.........:..x....:.::x::...:...................x:---x......:..xxxx.x:......:............:....................:......:..x.x..:....................:........:.............x...:................:..::..::.x.....:..............x...::x........::.......x....::.......x..x...x..:....x.:.:.:...x....-..:....................x.::...............x...x:......x.......::........:....::.........x:............................:---.......x....x:.....:...x-.:x...::x::.xx...x.:...-:.x..x.xx:x...x...::..:...xx:x.::....x::x...x..:......:. 51M1I15M5I58M3I236M1I119M3I24M1D23M1D56M 447/582 76.8% 595/94230402 0.0% 15/582 2.6% 36875807 NA +3002 chr4 + 190214555 98163542 98163541 98163584 43 TGTTCTTGGGTTGTTTTTTGTTTGTTTGTTTGTTTTTTCCCTG chr4 + 94230402 89314586 89314585 89314628 89314586 89314585 89314628 43 TGTTGTTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTG ....x.......x.......................x.:::.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 8848956 NA +3148 chr4 + 190214555 98195864 98195863 98195963 100 ACAAAAAAATAGTTAGGGGTGGTGGCACACACCTGTAATCCCAGCTATTTGGGAGGCTGAGGTGGGAGTATCGCCTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATACACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...::..::.xx:x:......-----...x....:.:.......:...::........x:xx.x.x.x.:.:...:..::.:..x..x:.....:.. 24M5D71M 61/95 64.2% 95/94230402 0.0% 5/95 5.3% 22162681 NA +3332 chr4 + 190214555 98198753 98198752 98198797 45 CTCCCCTCTCCCCTCACCAAAAAAAAAAAAAAAAAAAAAAAAACC chr4 + 94230402 57999188 57999187 57999232 57999188 57999187 57999232 45 CTCCCCTCCCCCCCCCCCAAAAAAAAGAAAAAAAGAAAAAACACC ........:....:.x..........:.......:......x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 40199565 NA +3249 chr4 + 190214555 98198754 98198753 98198835 82 TCCCCTCTCCCCTCACCAAAAAAAAAAAAAAAAAAAAAAAAACCCGCACAAAAAGCAGAGGCACA-CTACGAATTCCCATTAG chr4 + 94230402 71419192 71419191 71419274 71419192 71419191 71419274 83 TCCCCCCCCCCCCCCCCAAAAAAAAACAAAAAACAAACCAAACACAAACAGCAGGCAAAAAAAAAGCCATGAGTTTCTAATAG .....:.:....:.x...........x......x...xx....x.:x...:x.:...:.::x.x.-.:.:..:..:.:.x... 65M1I17M 57/82 69.5% 83/94230402 0.0% 1/82 1.2% 26779562 NA +3045 chr4 + 190214555 98200002 98200001 98200092 91 AGAGCCAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGATCACTATATA----TTTATCTCAGAGAGTGATGTTGCAATTAA chr4 + 94230402 33767105 33767104 33767199 33767105 33767104 33767199 95 AAAAACAGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAACTCTCTAAAGTGGTTAATCAAAGCACTAGATTTTGCATTTGA .:.:x.....:..x:.:.............x..........xx..:..:...x.x..x..x.----..x...xx..x:xxx...x.....x..:. 62M4I29M 64/91 70.3% 95/94230402 0.0% 4/91 4.4% 64432897 NA +3017 chr4 + 190214555 98205017 98205016 98205058 42 GCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAA chr4 + 94230402 79620279 79620278 79620320 79620279 79620278 79620320 42 GCTTCTCAAAAAAAAAAAAAAAGGCAAAAAAATAAACCCAAA ..x...................::x.......x......... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 18584738 NA +3620 chr4 + 190214555 98205024 98205023 98205235 212 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAAACACAACAATGTAGCCTGTTTTACAAGTCTCAAAGTATTTCGGTGGCCAGTAGGAAGTTGGCTAACTGGGAAAGA-------TGCTGAGATACAAGATTGGCTGAATGGTAAGATAAGGCAT-----TCTTAG----TTTTGGAATGGGGAACTGGGAAGTA------------AGATGAGATCTAGACCCAAAAAAAAAATCAA chr4 + 94230402 11702813 11702812 11703048 11702813 11702812 11703048 236 AGAAAGAGCAAAAAAAAAAAACAAAAAAACCCAAACCATAGGAGTTTCACTTGTTTTAACAACATGGAAGCTTTCCATGGACTGATGGGGAACTGG---AATAGGAATGAGCATTTTCATAGTGATAGAGAGATGGTAGAA-GTGAAGACTGGTCATGAAGGTTTTGGAGACCTGTGGAGGGAAAAGCTGTGAAATACAGAAAATAAAGAAAAGAAACTTATATCTGAAAGGAAAGTCAA .:...:.:x............x.............x..:.:x.:.x.x:.:.......xx.::x.x:...:x..:.:xx.:.:::.:..:.::...---.x.:....x..-------:::x.x....x.:::x...:x...-.xx....:x:.x...-----.:..:.----:.x....:x.:::.:...x...:..------------.:.x..:.::..x.:.::...::...:.... 96M3D11M7I24M1D15M5I6M4I25M12I31M 128/208 61.5% 236/94230402 0.0% 32/208 15.4% 86502211 NA +3026 chr4 + 190214555 98205026 98205025 98205075 50 AAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAAACACAACAATGTAGCCT chr4 + 94230402 37350839 37350838 37350888 37350839 37350838 37350888 50 AAAAAAAAACAAACAACAAAAAAAAAACCCACCAAACAACAACACAGCCT .........x...x..x..............xx.x.......:::..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 60854187 NA +3111 chr4 + 190214555 98211768 98211767 98211805 38 TTTTTGTGGGTTTTTTTGTTTTGTTTTGTTTTGTTTTT chr4 + 94230402 28518180 28518179 28518217 28518180 28518179 28518217 38 TTTTTGTGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTT ................................xx.... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 69693588 NA +3250 chr4 + 190214555 98216824 98216823 98216920 97 GGCTGGGTAATAGAGGGAGACTCAGTCACAAAAGAAAAAAAAAAAAGAAGAGAGTTTGTGAG-------CAGATGGAAAATAC-TAGGAAATGAGAATAAGATAA chr4 + 94230402 51733707 51733706 51733811 51733707 51733706 51733811 105 GGCGGCGTCATAGGAGAAGACCTGGGCACAAAGAAAAGAAAGAAAAGGAGAAAATTTCTGAGAATTACTCTGACAAATCAGACGTAGAAAATGCTGATGAGACAA ...x.x..x....::.:....:::.x......::...:...:.....:...:.:...x....-------.x..:::.xx.x..-...:.....xx:..:...:.. 62M7I14M1I21M 66/97 68.0% 105/94230402 0.0% 8/97 8.2% 46483117 NA +3072 chr4 + 190214555 98221313 98221312 98221373 61 GTGCGCCTGTAATCCCAGCTACTCAGGAGGTTGTGGCAGGAGAATCACTTGAACCTGGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:.........::::...:..x.x.xx.x...x..........::.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 22188109 NA +3482 chr4 + 190214555 98221610 98221609 98221692 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:.........:..:........x.xx.x...x.:..........::..x:xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 22188413 NA +3374 chr4 + 190214555 98229981 98229980 98230034 54 TGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.............::........x.xx.x...x...........x.:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 22196770 NA +3257 chr4 + 190214555 98241220 98241219 98241291 72 GCACCTATAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:........x:.::........x.xx.x...x.:........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 22208014 NA +3308 chr4 + 190214555 98246144 98246143 98246225 82 CATGGTGGTGCGCACCTGTAGTCCCAACTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGAGG-TGGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x......:...:.....::::........x.xx.x...x.:........::..:.-.xx...:..:.. 11M2D57M1I12M 58/80 72.5% 81/94230402 0.0% 3/80 3.8% 22212947 NA +3298 chr4 + 190214555 98252011 98252010 98252166 156 AAAAAAAAAAAAACAAAAAATTACATCATGGAACTTTGATTAAGTTTCAGGAGGGAAAAAAGGACATAAAAAGGAAATTTATGGTACATCTGAAAAGACAAAAATGTATGTCAATGAAATGATTAAATCATACATATAAAATAAAAAGTAAGAAAA chr4 + 94230402 28700798 28700797 28700935 28700798 28700797 28700935 138 AGAAAAAAAGGAACAGATAATAAAATCAGAGAAACTGGTTTTAGTTTCAGGATGAAAAAAA----ATGAATAGAAATGTTGAAGTA------AAATAGTGAAAATGTTT----ATGAAGTATTT---TCATGGAAGTACAAT-GTCAGTAAGAAAA .:.......::....:.x...x.x....x:...x:.x.x..x..........x.:......----..:..x..:..xx..:x:...------...x::::.......x.----.....:.:x..---....:x.x:..x...-:xx.......... 61M4D21M6D17M4D11M3D15M1D13M 97/138 70.3% 138/94230402 0.0% 18/138 13.0% 69551213 NA +3642 chr4 + 190214555 98273414 98273413 98273550 137 ATCATTTTTTTTACTACATTTGAAATATGATAACATTAATTGAACACAATTTATTGTGATTAAAAAATGAAAAGACTGGAGTTCTTTTTTTTTAATTTATATTTTTTATTTTAAAGTTCTTTTGGGATAA---CATTTCA chr4 + 94230402 65599345 65599344 65599471 65599345 65599344 65599471 127 ATAATTTGTCCTAATGCATT---------AAAATATTACCTAAAC----TTTGTTTTGTCTATAGAACAGTAGGACTGCAATGCTTTTTATTTTATGTATATGTTTTATTTTTATATGTTTATGGAATAATTGCATTTCA ..x....x.::..x.:....---------.x..:....x:.:...----...:..x..x:..x.:..:::x.:.....x.:.x......x...x..x.....x.........x.x:.x:..x...:....---....... 20M9D16M4D81M3I7M 88/124 71.0% 127/94230402 0.0% 16/124 12.9% 32674069 NA +3239 chr4 + 190214555 98279084 98279083 98279153 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGTACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:...........::........x.xx.x...xx:.x..x......:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 22245887 NA +9131 chr4 + 190214555 98293383 98293382 98293526 144 CTGATTTTTTTTTTTCTT--------TAAGCAGATAATCTCAGTGATACCTTGAAGAAGCTGAAGATAACAGCTGTTGACAAGACTGAGGATAGTTTAGAAGGATGCTTGGATTGTCTGCTTCAAGCCCTGGCTCAAAATAGTAAGTTTCAT chr4 + 94230402 61307943 61307942 61308094 61307943 61307942 61308094 152 CTGATTTCTCTTTTCTTTGTGTTTACCAAGCAGATAATCTAAGTGATGCCCTGAAAAAGCTGAAGATAACAGCCACTGACAGCACAGCAGATAGCTTGGAGGGATGCTTGGACTGCCTGCTTCAAGCTCTGGCACAAAACAGTAAGTTCTAT .......:.:....::..--------:.............x......:..:....:.................:::.....:x..x.x:.....:..:..:...........:..:...........:.....x.....:........::.. 18M8I126M 117/144 81.2% 152/94230402 0.0% 8/144 5.6% 36985440 NA +3063 chr4 + 190214555 98302910 98302909 98302988 79 GTCATGCATGCCTGTAATCCTAGCTACCTGGGAGGCTGAGGCATGAGAATTGCTTGAGCCCGGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:....:.--....:.:.:......:..::........x.x..x...x::.....:...:.:..x:xx:..:..:.. 10M2D67M 52/77 67.5% 77/94230402 0.0% 2/77 2.6% 22269709 NA +3658 chr4 + 190214555 98308132 98308131 98308261 130 AAGAATATATATATGTGTGTATATATGTGTGTGTGTGTGTGTATGTATGTGTATGGGTGTGTGTATATGTGTGCGTGTATATAGGTATATACATATATGTGCATATATGTGTATATACATGTATATATAC chr4 + 94230402 21109175 21109174 21109302 21109175 21109174 21109302 128 AAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGG--CGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....x:x.x..x..:x....:........x.x....x.--:....x.:....x::x::::....:x:...:::x....::x:.:..:x...::x.x..::...........:x.:...:..::.:.. 41M2D87M 78/128 60.9% 128/94230402 0.0% 2/128 1.6% 77198957 NA +3021 chr4 + 190214555 98308133 98308132 98308185 53 AGAATATATATATGTGTGTATATATGTGTGTGTGTGTGTGTATGTATGTGTAT chr4 + 94230402 32744978 32744977 32745030 32744978 32744977 32745030 53 AGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT ........x...::.:::..:.:.::x.....::...............:... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 65563155 NA +3244 chr4 + 190214555 98308142 98308141 98308256 115 ATATGTGTGTATATATGTGTGTGTGTGTGTGTATGTATGTGTATGGGTGTGTGTATATGTGTGCGTGTATATAGGTA--TATACATATATGTGCATATATGTGTATATACATGTATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTAC--TCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x..:x.:..:..:.....x.x....x.:....x...:....:--x::::.:..:x:....:.x.:..::..x...--:..:.x.x.:...::..:.:.:..x....:....:.:. 44M2D31M2I38M 71/113 62.8% 115/94230402 0.0% 4/113 3.5% 77198955 NA +3391 chr4 + 190214555 98308188 98308187 98308272 85 GTGTGTGTATATGTGTGCGTGTATATAGGTATATACATATATGTGCATATATGTGTATATACATGTATATATACACACACACCCA chr4 + 94230402 85834542 85834541 85834614 85834542 85834541 85834614 73 GTGTCTGTGTGTGTGTGTGTGTATTAATGTA------------GGCATACATATGTAAATACATGTTTATGCACACATACACACA ....x...:.:......:......xx.x...------------x.....:..:....x........x...::.....:....x.. 31M12D42M 57/73 78.1% 73/94230402 0.0% 12/73 16.4% 12473646 NA +3236 chr4 + 190214555 98308280 98308279 98308339 60 ATATATACACACACACACTATATATATATATATATATATATATATATA------------TATATGCGCCAG chr4 + 94230402 33416725 33416724 33416796 33416725 33416724 33416796 72 ATGGATACACACAGACACTGGATATACATATATATATATCTGTATACACATGTCTGCACGTATGTGCGCCAG ..:x.........x.....:x.....:............x.:....:.------------...:........ 48M12I12M 50/60 83.3% 72/94230402 0.0% 12/60 20.0% 64891555 NA +6477 chr4 + 190214555 98314104 98314103 98314281 178 GCTCGTAATAACTTAGTTATGGATTGATCATATTTTCATTCTGATGTGTGCA--TGTGGGAGGGATAATATAAAGGCAAGGTAATTTTCTGCAGTGATTTCTGAAAGCTTAAAGAACATTTTT--------GCATACATTTGCTTATGAAAAAACTATAATCCAAGACCTGATTAGCTTAATGCAAAG chr4 + 94230402 61320674 61320673 61320858 61320674 61320673 61320858 185 GCTCATCATTATTTATTCATATGTTCATCCT--TCTCTTTCTGATGAGAGCACATGTGGGAGGGACATTATAAAGCCACGGTAGTTTTCTACAGTGGTTTCTGGAGGTTTACAAAACATCTCTTCAGCTAGGAACACATACATTTTTCAAAAGAGTACACTGCAA-ACACGGTTGGCTTAATAAAAAG ....:.x..x.:...x.:..:x:..x...x.--.:..x........x.x...--...........:.x.......x..x....:......:.....:......:.:.:...x.:.....:.:.--------.x.:....x:::..x.x....:.x..:.x.x...-..x:.:..:.......:x.... 31M2D19M2I69M8I34M1D22M 127/175 72.6% 185/94230402 0.0% 13/175 7.4% 36993430 NA +3082 chr4 + 190214555 98336856 98336855 98336910 55 CTGTGTTTTCATTCTGGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTTTC chr4 + 94230402 38625019 38625018 38625073 38625019 38625018 38625073 55 CTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCTCTTCTCTCTTC ....x....::..x.x...x.....................x:.:..x.:.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 59711837 NA +3069 chr4 + 190214555 98340723 98340722 98340805 83 TAGTTGAAAGAGCAAGACTCCGTCTCAAAAAAGAAAAAATATATATTCACATATATGTATATATGTAAATATATATATAAAAA chr4 + 94230402 90030070 90030069 90030145 90030070 90030069 90030145 76 TAACTGAAATAAAAAAATTT-------GAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTACTGGTAGAAA ..::.....x.:x..:.:.:-------:...:..............x....:....:.......x...x.x..:xx:..:... 20M7D56M 55/76 72.4% 76/94230402 0.0% 7/76 9.2% 8310653 NA +18199 chr4 + 190214555 98343117 98343116 98343417 301 TCTTTGTATG-TATCTCTTTTAGATACGGAAACAAGTGAAAAAATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTACCTCAAGAACTTTTCTGCTGGGAACGTCTTCAGTTTTACATCTTACTTGTCAGTATGCTTTA-TTAATTTATGTTTTAATTTTGTAGATTAGACATTTTTTATTTCTATTTATCTTTTGTTTGACTCTTCATGTAATTGTTTTAAAT chr4 + 94230402 61324690 61324689 61324985 61324690 61324689 61324985 296 TTTTTGTGTGATTTGTTTTTCAGATATGGAGACAAGTGAAAAAATCCAGAAAAGTGGAGTTCTTCAGGTGTTTGCGAGTCTGTTGATGCCACAGTCTTCCTGCACAGCAAAAGTAGCTAACATCATAGCAGAAGTAGCCAGAAATGGTGAGGTTTTCTACAAGAACTTTTCTGCT-GGAACATCTTCAGTTTTTCACCTCACTTGTCAGTATGTTTTACTTCATTTATGTTTTCATTTTGTAGATTAGACATCTTTCATATCTCTCCTTCTCACGTTTTGTTTTT------GTTGTGTCAAAT .:.....:..-.x.x.:...:.....:...:.................::x.......:.x......x.......:..........:x................x...x...............................:..............x.:x................-.....:...........x..:..:.............:....-..x...........x..................:...:..x...x.::x...:x:....x::.:..------:....x.:.... 10M1I164M1D42M1I66M6D12M 247/294 84.0% 296/94230402 0.0% 9/294 3.1% 37018427 NA +9444 chr4 + 190214555 98352466 98352465 98352615 150 TTATTTTCAGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCGTAAGTGTTGACAT chr4 + 94230402 61327446 61327445 61327595 61327446 61327445 61327595 150 TTGTTTGCAGAATTTATGCGGAACCCATGTGTGGATGCTGGGTTGATCCCTCCTTTGGTGCAGATGTTAAACTGCAAAGATCAGGAAGTATTGCTGCAAACAGGACGTGCCCTGGGCAATATATGCTACGATAGCCGTAAGTGTTGAAAT ..:...x....:........:.x:.................:.....::.x..x:........x..:....:x.......:........::....x.....:..xx.x..:..:..x..:.....:.....................x.. 150M 120/150 80.0% 150/94230402 0.0% 0/150 0.0% 37025020 NA +16915 chr4 + 190214555 98378975 98378974 98379194 220 TTCTTTTTTCTTTTATTTTTAATTTAACTCTTTGTTTTACAGATGAGGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAGATTGTAATTGACCATTTAAGGTCACTGTGCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGACTGTCTTTTGTGGCATGCTGATGAACTATAGCAATGAGAATGGTAAACAAAACTGAAAACTTGCTTTATCTCT chr4 + 94230402 61341576 61341575 61341795 61341576 61341575 61341795 220 TTTTGGTTTCATTTATTTTTAATGTAACTCTTTGTTTTACAGATGAGGGCAGGAGCGCAGTTGACCATGCAGGTGGTGCACATATTGTAGTAGACCTTATAAGGTCGCTGTGCAGTAAAACAGATCCAGCCAGTGAGAAGCTCTTGACTGTCTTTTGTGGCATGCTGATGAACTATAGCAATGAGAATGGTAAACAACACAAAAAACTTGCTTTATGTCT ..:.xx....x............x............................:..:...........x..............x......:.x....x.x.......:..........x.........x....:................................................................x..x:..............x... 220M 199/220 90.5% 220/94230402 0.0% 0/220 0.0% 37037399 NA +9843 chr4 + 190214555 98387410 98387409 98387596 187 TCCTCAACTTGAGATCTTCTCTCCAGATCTCCATTCTTTGGAGTTTCCATGAGTGTGACCTGAAGAACTTGGAACCATTGAAATTCAAATGT-AGGTAGGTAAGTGTTCACACCAGCGCATGCGTTGATTGCCTTATATCTCTTTGTATATGCATCTGTATTGCACC-CCCTCAGTGCCTTTCTTCCTC chr4 + 94230402 61346567 61346566 61346753 61346567 61346566 61346753 187 TTCTCAATTTGGGATATTCTCCTCAGATCTT-ACTCTTTGGAGTTTCCATGTGTGTCACC-GAAGGACATGGAGCCATTGAAATTCAAGTTTTAGGTAGGTAACTATTTGTGCTGGCGCATGTATTGATTGCCTTTTATCTACCTGTATATGCATCTGTGCAGCATCACTATCAGTGCTTTTCAGCCCC .:.....:...:...x.....::.......:-.:.................x....x...-....:..x....:..............:.x.-..........x.:..::::.::.......::...........x.....x::...............::x...:.-.:x.......:....xx..:. 31M1D28M1D31M1I74M1I21M 146/185 78.9% 187/94230402 0.0% 4/185 2.2% 37040843 NA +11184 chr4 + 190214555 98391926 98391925 98392137 212 TTGTTGTTTTTTTTTTGTTTTTACAGATTCGCTTCAAGCTCAGCTTATCAATATGGGTGTTATTCCTACCTTAGTGAAATTACTGGGCATCCACTGCCAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATTTGGTAATTTAGCAGAACTTGGTAAGTCTTAGTCATGAACCACAAATGTAATT---AACTTATTAATGTG----CTTACAATAAA chr4 + 94230402 61349444 61349443 61349661 61349444 61349443 61349661 218 TTGTTGTGCTTTCTTT-TTTACATAGATACCCTGCAATCACAGCTTATCAATATGGGTGTTATTCCTACACTAGTGAAATTGTTGGGTATTCATTGCCAAAATGCAGCTCTGACAGAGATGTGCCTTGTTGCTTTTGGCAATTTAGCAGAACTTGGTAAGTCCGCAATATTCATCTCAAACGTAGATCCGGTTTTCTTAAAGTGCATTCTTACAACTAA .......x:...:...-...x:.:....x.x..x...x.x.............................x:..........::....:..:..:.................x.....:.....:........x.....:.......................:xx:x:..xx.:.x....:...:x.---:x:..x....x...----.......:x.. 16M1D170M3I14M4I11M 168/211 79.6% 218/94230402 0.0% 8/211 3.8% 37042482 NA +11948 chr4 + 190214555 98404259 98404258 98404607 349 ACCTTTTTTTATAGCTCAAAT-ATAATTGG-GTCAGAACATTTTCTCTAAAGCCTTAGA--TATTT-TTCCTTTTCAGGGACATTAAAAATGGATTTGATTGTTCCCATATTTGAAGAGTATTTGTATTTATCAGTAATGGTACAAAATAA-CTAAGTATTGAAAGTATTAGAAAACAGTTTCTGGACTTTATTTGGTTTAAGTTTTTCTT----------TTTTATTTTACAGAGTCAAGTAAAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGCTAGTAAAACTCTTCAAGAAACAAATAGAACATGATAAGAGAGAAATGATTTTTGAAGTTCTTGCTCCATTGGCAGAAAATGGTGAG chr4 + 94230402 61351743 61351742 61352093 61351743 61351742 61352093 351 ATCTTTTTGAACAGCCTTATTCATAATTGAAGGCGGTACATTTGCTTTAAAGCATTAAGACTATTTCTTTCTATTCTGTGACA---AACACGAGTCT-ATTGTTCTTGCCTGTGAAGTGCACT-------ATTAGTCATCTCACTGAGTAAACCTGGTAAAAAGAGAGAAAAAAAATCATCCTAGCTTTTGATTTGGTTTG---TTTACTTGATATGGAAGTTTTGCTTTGCAGAGTCAAGCAAAGAACAGTTTGCCTACACAAACATTGCTGAAGAGCTTGTGAAACTGTTCAAGAAGCAAGTAGAGCATGATAAAAAAGAGATGATCTTTGAAGTTTTGGCTCCCCTAGCAGAAAACGGTGAG .:......xx.:...::x.x.-.......:-.x.:.x......x..:......x...::--.....-..:..x...x.x....---..x.:.::.:.-.......::::x.x.....x.:.:.-------..:...x..xx:..x:.:...-.:x:...xx:.:..x:xx.:....:x:.:::x.xx:..x.........:---...x...----------....::...:..........:...............x::....................x..:.....x........:...:....:........:.:...:.....:.........:.x.....x:.:........:...... 21M1I8M1I28M2I5M1I16M3D11M1D25M7D21M1I49M3D7M10I144M 244/335 72.8% 351/94230402 0.0% 30/335 9.0% 37052516 NA +3253 chr4 + 190214555 98412375 98412374 98412457 83 CATGGTGGCATGCACTTTTAGTCCCAGCTACTCAGGAGGCTGAGATAGGAGGATTGCTTGAGCCCAGGAGTTCAAGGATGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x.x....:.........::::........x:xx.x.:.x::.....:.....:..:.:x:..x..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 22379178 NA +16796 chr4 + 190214555 98416705 98416704 98417523 819 TATCTCAAAGTTTGATTATTTTGTTCACGTTGTTCTTTAGATGCTATTAAACTACAGCTGGTTGAAGCAGGCCTAGTAGAGTGTCTACTAGAGATTGTTCAGCAAAAAGTGGATAGTGACAAAGAAGATGATATTACTGAGCTCAAAACTGGTTCAGATCTCATGGTTTTATTACTTCTTGGAGGTGAGTTGTAATTTATGCCAGCCAAAGAATGTGGTTGTCAGATGTTTTTAAAATTTATTGTCTCTTCTGTAAATACTACCCTAGACATTTTCTCATATTCCTATCTCACCTGCTATTGAGGTGATGATTTTGACATCTTAAACATGCCATTGATACAACCAGACATAATGAACCTGAAAAAGAAGTGTCTTCACTATCTTCCAGTATTTGAAGAGCTGTCACATAGAAGAGATAGCTTTGGCACCAAGGGACTAAAGAAAAGCTAGATGGCTCCCTGGGACTTGGACTAGAAAAAATGCTAGACTCTATTGTCTAGTATCTATTAAATGTTTATTATAAAAAGAATCATTACTTTTCCCATTATGAATGTAACAGTTTGTGAGGTGTGAGTTTCCAGTTGGATATTCACCTAAGAATGTGAATTTGTTACTCCTAGTTATTTTTCTCTTGCTTAACTATTCGTTTCATTTACCTCCAGATGAATCCATGCAGAAGTTATTTGAAGGAGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGGATCCCATCAAATAACCACCAGCTACAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATGGTAAGCATAT----TAGTTCCTCCTTTGT chr4 + 94230402 61354997 61354996 61355603 61354997 61354996 61355603 607 TATTTTAATGTTGGCTCCTCCTATCCATGCTATTTCACAGATGTCATTAAGCTGCAGCTGGTTGAAGCAGGCTTGGTGGAGTGCTTACTTGAGATTGTCCAGAAGACTGTTGACAGTGACAAAGAAGATGACGTTGCAGAGCTTAAAACAGCTTCTGATCTTATGGTTTTGTTACTGCTTGGAGGTAAGT------------------------GCAGTG----------------------TGTCACTTCTGCAAA-GCAACAGCAGACA-----------------CCTGTGTGCCATTTGGCTGCTGAATGT-------------TACTACTCATTAAACAATTTTCAAATAACCTAAAGAA------------------TCTGGCATTTAACATTTAGTAGGTTAGGTTAGAT---TTCATCACTCATCGAATCCAGAA---CTAGAT-------TGG---TTGAA---GTAAAGGTGGTAGA-------GCTTGGTAAATACAAAG-----------AAAAGAAT-------TTTCCC-----------------------------------------------------------TGAAATT--------------TCTTTGGCTTGCT-GACTATCTGCTT--TTTATC-CCAGATGAATCCATGCAGAAGTTATTTGAAGGAGGAAAAGGCAGTGTGTTCCAAAGAGTACTTTCATGGATTCCTTCCAACAGCCATCAGCTACAACTTGCAGGAGCATTGGCTATTGCAAATTTTGCCAGAAACGGTAAGAATACGCCATAGTATCTTATTTGT ...:.:..x...x.x.:x.::.:.:..:.:.:..::x:.....::.....:..:..................:.:..:.....::....x........:...x.:.xx..x..:.................::..:.x.....:.....x.x...x.....:........:.....x.........:...------------------------.::..x----------------------....x......:...-:.x..xx:.....-----------------.::::x...:...x:.x..x...x.x.-------------.:.:.:.x..xx...x.xx:x:..xx.....:..:..------------------..::.:....:.x:xx:x..x:xx...:xx....---..::x...:x.xx..x.xx....---......-------...---...:.---.x...::..x....-------.::.:...xx..:x..:-----------........-------......-----------------------------------------------------------....x..--------------.:...xx......-:.....::.:..--....:.-.........................................:.....:..:.....:.....:..x.....:..x..x..:.:...:........:.....x...........x....................:......x...:----....x:..:x..... 190M24D6M22D15M1D13M17D27M13D37M18D34M3D23M3D6M7D3M3D5M3D14M7D17M11D8M7D6M59D7M14D13M1D12M2D6M1D146M4I15M 447/603 74.1% 607/94230402 0.0% 220/603 36.5% 37061708 NA +9103 chr4 + 190214555 98418632 98418631 98418799 168 AAAAGATGTGTGTTTTTTTTTTCAGATGCAAATTGTATTCATATGGTAGACAATGGGATTGTAGAAAAACTTATGGATTTACTGGACAGACATGTAGAAGATGGAAATGTAACAGTACAGCATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTCCAGGTAAGACT chr4 + 94230402 61355958 61355957 61356125 61355958 61355957 61356125 168 AAGTGACTTATCTCATCTTGCACAGACGGAAACTGCATCCATATGGTGGATAACGGCATAGTTCAAAAGCTGATGGATCTGCTAGACAGACATGTGGAGGATGGGAATGTAACTGTGCAGCACGCAGCTCTGAGCGCGCTCAGAAACCTGGCTATTCCTGGTAAGCCT ..:x..:x.:.x.:x.:..x:x....:.x...:..:..:........:..:..:..x..x..xx....:..x......:.:..:...........:..:.....:........x..:.....:.....x..:..:..x..............:.....x......x.. 168M 126/168 75.0% 168/94230402 0.0% 0/168 0.0% 37062674 NA +10237 chr4 + 190214555 98420004 98420003 98420165 162 TCTCTTTTTCTCCAGTTATAAATAAAGCAAAGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGAAATTTCTTAAATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGGAACATTAAGAATGTTAATAGATGCACAAGGTAAAAGAAATGTTTTCCCCA chr4 + 94230402 61357506 61357505 61357667 61357506 61357505 61357667 162 TCTTTATTCATGCAGTTGTAAATAAGGCTAAGATGCTATCAGCTGGTGTTGCAGAAGCAGTATTGAAATTTCTCAGATCGGAGATGCCCCCTGTTCAGTTCAAGCTGCTGGGAACGTTACGAATGTTAATAGATGCACAAGGTAAAAATAAACCGTTCTCTA ...:.x..:x.x.....:.......:..x......:..........x..::....:.....x...........:.:...x..:.....:..............:..x........:...x...........................:x..xx:x...:.:. 162M 131/162 80.9% 162/94230402 0.0% 0/162 0.0% 37062498 NA +11124 chr4 + 190214555 98421250 98421249 98421418 169 TATAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTTAAGTTAGTGGAGCGTTTGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTGCCCTTATACGACACAGTAAATCAAAAGTAAGTTCCAGAGGAAACTGTTCA chr4 + 94230402 61358648 61358647 61358816 61358648 61358647 61358816 169 TGTAGCAGAAGCAGCTGAACAACTGGGAAAAAATGCAAAACTGGTGGAACGATTGGTGGAGTGGTGTGAAGCCAAGGATCACGCAGGTGTGATGGGAGAATCAAACAGACTACTTTCTGCACTTATACGACACAGCAAATCTAAAGTAAGTTAGTGGTGAAAAAGCTCA .:..........x.........:.......:....:x..::.:.....:..x........:..............:.....:..x...........:..:...........:..x.....x..............:.....x..........xxx.:x....xx.:... 169M 139/169 82.2% 169/94230402 0.0% 0/169 0.0% 37062602 NA +3067 chr4 + 190214555 98422071 98422070 98422129 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 22388865 NA +3188 chr4 + 190214555 98423504 98423503 98423547 44 TTTGAGGGTTTTTTTGTTTTCTTTATTTTTTGTTTTTTTGTTTT chr4 + 94230402 22713665 22713664 22713708 22713665 22713664 22713708 44 TTTGAGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTGCCTT ....................x...xx..............::.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 75709839 NA +3064 chr4 + 190214555 98424630 98424629 98424703 74 GTGCGCCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........x.::........x.xx.x...x::........::.:.:x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 22391426 NA +12505 chr4 + 190214555 98433851 98433850 98434084 234 ACTCAACAAT----GAGTTGACTGATTTTAATGCATGTTCCTTATGTTTAAAAT---TAAAGTCTAT---------------AATTCTCTGATATT------ATTTATTGTAGGATGTAATTAAAACCATTGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAATGAAGCTCTTGTTGCTTTGGCATTAATAGCAGCTTTAGAATTGGGTAAGTACCCCAGTGACAAACT chr4 + 94230402 61361763 61361762 61362023 61361763 61361762 61362023 261 ACCCAACGACTGCCAAGTTAACTTGTTTAAATGTAT-TTTTTAATGTTTAAAATGTTTAAACTTTGTTTGTATGTAATGCAGAATTTTTTCATTTCTGTGCCATTTATTTTAGGATGTAATTAGGACGATTGCACAGAGCGGTGGCATCAAGCATTTAGTAACCATGGCAACCAGCGAACACGTAATAATGCAAAACGAAGCTCTCGTTGCACTGGCATTAATAGCAGCTTTAGAGTTAGGTGAGTATCCCAGTAGCTAACT ..:....:.:----:....:...x:...x....:..-..::.x...........---....x.:.:.---------------....:.:.x..x.:------.......x.............::..x....::.....:...............:....x...........:..:.....:...........:..:........:.....x:......................:..:...:....:......::.x.... 10M4I22M1D17M3I10M15I14M6I160M 189/233 81.1% 261/94230402 0.0% 29/233 12.4% 37072088 NA +3219 chr4 + 190214555 98435942 98435941 98436000 59 GCTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x......:............:........x.xx.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 22402736 NA +9145 chr4 + 190214555 98436928 98436927 98437077 150 TTTTATTTGTA-----GGCACTGCTGAGAAAGATCTAGAAAGTGCTAAACTTGTACAGATTTTACATAGACTGCTAGCAGATGAGAGAAGTGCTCCTGAAATCAAATATAATTCCATGGTCCTGATATGTGCTCTTATGGGATCTGGTAAGTATT chr4 + 94230402 61363485 61363484 61363639 61363485 61363484 61363639 155 TTTCACTTGTATTTCAGTCACTGCTGAAAAGGATCTTGAAAATGCTCAGCTTGTTCAGATTCTACACAGACTGCTATCAGACGACAGGAGCGCTCCAGAAATAAAATACAACTCCATGGTGCTGGTCTGTGCCCTTATTGGATCTGGTGAGTACT ...:.:.....-----.x.........:..:.....x....:....x.:.....x......:....:.........x....:..x..:..:.....x.....x.....:..:........x...:.x.....:.....x.........:....:. 11M5I139M 122/150 81.3% 155/94230402 0.0% 5/150 3.3% 37073443 NA +32877 chr4 + 190214555 98441958 98441957 98442686 729 AGAATCATATCTGTTATTTTTTTGTCTTCCAGAATGTCTACACAAGGAAGTACAGGATTTGGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGAAAGCTGAGAACTGCCCGA--TACACGGCATCATCCCATCTCTAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT--AAACCTATAGTTAGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCT-CTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCAGTAAACTACATAATGATGTACTGGTAAACTAGAAACAA---AGAATGCAGCAGGATCTGTCTAGCTTATTAAAGATGAAACTGAATTGGAAAAATAGCTCCATTTTTTGGTGCTTGGGAAGCACAGTGACCAAAAAAGTTGTATGGCTGCTTATTCATTAGTCTTTCCTACTGATGTCAAATCCATGGTACCTAGAGTTAAAT-----AAAATTCCAATGCTCTTACTCTTTAACTTCTGGTTTCTCCTTTTTC chr4 + 94230402 61366448 61366447 61367166 61366448 61366447 61367166 719 AGAACTATTTCTTCTACTGTTTC-TTTTCCAGAATCTCTCCAAAAGGAAGTGCAGAACATGGCGTTCCTAGAAGTCGTATCAAAACTCCGCAGCCATGAGAACAAAACTGTTGCCCAGCAGGCCTCGCTAACAGAGCAGAGACTTGCCGTAGAAAGCTGAGGAAGGTCTTGTTTTCATTGCAT----CCATCACAGATTCCACCTTCATCCTTTGTCCTGCTGTCGCTCCTGCTATGTTTTCCACTGTATCACTTGTGCATGCGTGTAATGTCCCCACACAAATTGATAAACTGCTGTAGGTACCCATCCAAAAAGGTTTCTAAAAATTCATAGGTGGTGTTAACATGAATTT-----------GTCTCCGCCCGTAACTGTTCTACTTGTATTCTTGTTGCTTGGGCCACAT--AGTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAAAGTGGTACTACACAATGACTCTTTCCTCACACCCCCCTAACTGCATAACAATGTACTACTAAATTAGGGACAGTACAAGATGCAGCAAGTCCAGGCTAGTGCACTGACTGTAGGATTAAGAAGTAAATCTAGCTCCA-TTTTTGGTGCTCTGAAGAGGCAG-GTTTGAATGCATTGTACTGCTGCTCATTCACTGGTCTTGCCTATTAATGTCAAACTCGTGGTACCTAGAGGTAAACAAATAAAAATTTCAGTGCTTTCAC---TTATCCTGTGGTTTGTCCTTTTTC ....::..x...x:..:.x...:-.:.........x...x..x........:...:.:x....x..:.....x........x.....:.....:.............x..................x..x...............:.:..:..........:.xx.:.:x:--.x..:x....----.....x.x:...:.x...:::....:::...x..x.::x..:.:...x::..:..:..::..:.............:...:....:.:x.:..x......x:...:............:x:.:..x...:.....--...:::....x.:....x.x.....x...-----------......:...:....:.....-.........:.........:..:....--......................................xx..........:.......:x:...x....:x.xx:x....:.....::.......:x....:...::...:---.::........:.x:.x.x....:x:.:.:.xx:.:::.:.:.:xx.x...xx........-...........:x.:.::x:...-.x:::..x:x:.....:x......:.....:.:.....x....:.:........::.:............x....:-----......:..:....:.:..---...x.:.x......x......... 23M1D147M2I10M4D135M2I29M11D21M1I27M2D111M3I61M1D23M1D76M5I19M3D24M 528/706 74.8% 719/94230402 0.0% 36/706 5.1% 37075510 NA +3472 chr4 + 190214555 98457399 98457398 98457474 76 TGCACTCCAGCCTGGGTGACAGGGCAAGATTCCATCTCAAAAAAACAAACAAACAAAACAACAACAACAAAAAAAA chr4 + 94230402 81964155 81964154 81964230 81964155 81964154 81964230 76 TGTACTGTAGAGAGACTGACAGAACAAGTGTTCCTCATTAAAAAAAAATCAAACAAAACAACAACAACAACAAAAA ..:...x:..xxx.:x......::....xx.:.x..x:x......x..x.....................x..... 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 16493244 NA +3049 chr4 + 190214555 98457433 98457432 98457472 40 TCTCAAAAAAACAAACAAACAAAACAACAACAACAAAAAA chr4 + 94230402 27325822 27325821 27325861 27325822 27325821 27325861 40 TCCTCAAAAAACAAAAAAACAAAACAACAACAACAAAAAA ..::x..........x........................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 71131611 NA +3246 chr4 + 190214555 98457438 98457437 98457522 85 AAAAAACAAACAAACAAAACAACAACAACAAAAAAAAAAGAAAAAAAAACACACACACACACATGCACACACATCTAAAACATCT chr4 + 94230402 78347554 78347553 78347638 78347554 78347553 78347638 85 AAAAAACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCAATGCAGCT .......x.xx...x.x.....x.xx.....:.......xx..x.x..x:...:.:.:.:...::........:::..x:..x.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 20109884 NA +3339 chr4 + 190214555 98457438 98457437 98457473 36 AAAAAACAAACAAACAAAACAACAACAACAAAAAAA chr4 + 94230402 80728979 80728978 80729014 80728979 80728978 80729014 36 AAAAAACAAACAAACAAAACAACAACAACAAAAAAA .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 17728459 NA +3076 chr4 + 190214555 98457446 98457445 98457538 93 AACAAACAAAACAACAACAACAAAAAAAAAAGAAAAAAAAACACACACACA-------CACATGCACACACATCTAAAACATCTTACAGGCAGGTAGAAA chr4 + 94230402 63725891 63725890 63725990 63725891 63725890 63725990 100 AAAAATCAAAACAAGATTAAAAAGAAAGAAAGAAAAGAAAATACACACACAAAACCATCAAGTCCAAGAACATCAGTAAATTAGAACAAACTAGTAGAAA ..x..x........x.x:..x..:...:........:....:.........-------..x:.x..x:x.....x:x..xx.xxx...::.x:....... 51M7I42M 65/93 69.9% 100/94230402 0.0% 7/93 7.5% 34731555 NA +4147 chr4 + 190214555 98465888 98465887 98465964 77 GCTATTTTCTTTATAAAACTTGAGTCACTCTAACAACTTGAATTTAAGATAATTTACTTCAAATAAATACAGAATGC chr4 + 94230402 61370009 61370008 61370084 61370009 61370008 61370084 76 GCAATTTTATTTATAAAATTGTAATTA-TCTAACAAATTGCATATAAAATGATTTACTTCAAGTAAATACAGAGTAC ..x.....x.........:.xx.:.:.-........x...x..x...:..:...........:..........:.:. 27M1D49M 61/76 80.3% 76/94230402 0.0% 1/76 1.3% 37095879 NA +7895 chr4 + 190214555 98472256 98472255 98472596 341 TTTTTGGTAAGCATCTAACTGTC-CATAAATTCATGGCTACAGTAGAGATTCACGGCGCAACGACTTTCATACTGGTTATTTTTTTTTTTAATTC----------------------------------------TGTCAGTGAGCAGCATTTCCCAGTTTTA-------CACTCCCCTAATGGCAGCTCC-------------------------ATTAGG----CGAGACTGCAGGCTGCATCTGTGATTAGGT-----------------CCATGCAGCTCGAAGATCAGTTCGGCACGCGGGAGGGTCCCGAAAGCTGGGTCTGTCCAGTGTCTTGCAGCAGCGGTTGCAGGGGGTCTACCAGCTCGCCCTGACAGCTTCGATATCGCTAACCAAATTCTGGGCCAGGCATATCCCAAATATCTGAGAAAG chr4 + 94230402 61374933 61374932 61375352 61374933 61374932 61375352 420 TTTTAAAAAAGTGTCCACTTGTTACTCAGGATCAAGAATACAGTAGAGATTCACGGCTCAACAGCTTTCAAACTGGTGGTTT--------AAAGCaaaaaaaaaaaaaaaaaaaaagaaaaaaagaaaaaaaaaTTGCCCGTGAGCAGCA------GGTTTTAAAAAGCTCACTCTTCTCATCCCCACCCCCAAAGAAATATGAGTTCACTGCAATATCAGGAACTTAAAACTTGAGACTATGTGGGAGAGAAGGTTTCCCTGTCACCCATGTCCATACAGCTTGGTG-CCGGAGAGACACACTGGAGGTTTCAGAGGGTTTCGGTTGTCCAGTGTCTTGTTGTGGTTACTTCAGCAGTTTTACCAGGTGGCTCTGACAGCCTCAATGTCACTAACCAAATTCTGGGCTAAGCAAATCCCAAATATCTGGAAGAG ....x::x...::..:.x:...:-.x:.::x...x.:x...................x....::......x......x:...--------..xx.----------------------------------------..:.x..........------:......-------.....::..x..xx.x:.:..-------------------------..:...----::.:...xx..:..:::.xx.x..xx....-----------------....:.....:.:x.-:.:.xxx.:...:.x.....x.:.x..::.:.xx.x:..............:x.::.:x::.x...x:.x.:......x.x..:........:..:..:..:.................:.:...x..............::.:.. 23M1I58M8D5M40I15M6D7M7I21M25I6M4I30M17I15M1D146M 226/326 69.3% 420/94230402 0.0% 109/326 33.4% 37097323 NA +3104 chr4 + 190214555 98475850 98475849 98475950 101 CGTAGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTTCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA------GAAGCTTTGGGCTGTAGAACATGATGCCA .::.....:.--...x......:.........:.::........x.xx.x...xx:.x........------.:......x:.:x:xxx..x..x...... 10M2D54M6D29M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 22442653 NA +12235 chr4 + 190214555 98476184 98476183 98476488 305 CTTACCTGCAGCAATGCAATGCCTATGAAAATACCAGCAACGATGGTTAAATTGTCCTGCAACCACTTCTCAAACTGGGGCACACAGCCTTTCGTGTAGATTACAATCTGCTGGTCAACTTCCT-TCACAAGAGAAGAGGAGAGCA-----------------CATTGTCACA--GATAGAGCACCAGGCACAGGCCAAAG---------CTCCTCCAACACCCTTCGTGCTAAGCAACAACATGAGATTCCACTTACTGGTTTTTGCCTGGCATCATAGCCACACTGAGTGTTGATGACATCTTCCTGGTGAAGAAAGGA--AAGAGAAAAGTGA chr4 + 94230402 61375906 61375905 61376234 61375906 61375905 61376234 329 CTTACCTGCAGTAATGCTATCCCAATGAATATACCAGCAACTATGGTAAGATTGTCCTGCAACCATTTCTCAAATTGAGGGACACAACCTTTAGTGTAGATAACAATCTGCTGATCAACTTCCTGTCAGGGAAGAATGGAAGAAAAAAGAGGTAGTTACATTCAATTGTCACACCAGTAAAATAACCCGTTTTTGCCAGAGGGATTCAGATTCAGAGGACACATTACAAGAGGAGAAAAAA----AAAT---GCTTACTGGTTTTTGCCTTGCATCATAGCCACACTGAGTATTAATAACATCTTCCTAGAAAAGAGACAAACAGGAGGCAAATGA ...........:.....x..x..x.....x...........x.....x.:...............:........:..:..x.....:.....x........x...........:..........-...x:::....x:.:...:x.-----------------x.........--::..:.::.x.xx.:x:xx....:..---------:..xxxx:....x:.x.:x.xx:..x..x..----.:..---:.................x....................:..:..:..........:.x:....:.x:.--.:...:x..:... 124M1I21M17I10M2I26M9I31M4D4M3D69M2I13M 226/298 75.8% 329/94230402 0.0% 38/298 12.8% 37100278 NA +11846 chr4 + 190214555 98478670 98478669 98478829 160 CTGGCATTCACTTACTGCGGGATCTTTAGTGCAGCAGGAGAATGGAACGCCACATCGCTCTCGACTTGCATTGGAATCTGTGCAATTGAAGTAAATATTTAGGTTCCAATCATCAGCTCCAAAAGCCCCACAGCACTGCCACTAGAGCAAACAGGAAAGA chr4 + 94230402 61379639 61379638 61379796 61379639 61379638 61379796 158 CTGACTGTGACTTACGGCAGGGTCTTTAGTGCAGCAAGAGAATGGCACACCACAGCGCTCTCGACTTGCATTGGAATCTGTGCAATTGAAGTAAATATTAAGGTTCCAGTCATCAGCTCCAAAAGCCCCGCAGCACTGCCACTAGAAC--ACAGAAAGGA ...:.xx.x......x..:..:..............:........x..:.....x............................................x........:....................:................:.--....:..:.. 148M2D10M 141/158 89.2% 158/94230402 0.0% 2/158 1.3% 37099031 NA +15507 chr4 + 190214555 98481982 98481981 98482188 207 AAAACAAACCACTTTAAACTTACATATTCCTGGGTGAAGTCTATGAGGTTTTGCAAATCAATGTCATCCCGATATGCTCTGATGTTGTTGTTTATAAAGAAATACAGCTGGTCTTTGATCCAGTCTTTGAAAACAAATGCTAGAACTCCGGCAGTGAGCTCCAGGAAGAAAATAATTCCCAGGAACACAGAAAACTAAGATAAAAGA chr4 + 94230402 61381665 61381664 61381871 61381665 61381664 61381871 207 AAAATAAACATAGTCCTACTTACATATTCCTGCGTAAAGTCTATGAGGTTTTGCAAATCAATGTCATCTCGGTATGCTCTGATGTTGTTGTTTATAAAGAAATACAGCTGATCCTTGATCCAGTCTTTGAAAACAAATGCTAGAACACCAGCAGTGAGTTCCAAGAAGAAAATAATTCCAAGAAACACAGAAAACTATGAAGAAAAA ....:....xxxx.:xx...............x..:................................:..:......................................:..:................................x..:........:....:...............x..:..............x..x:...:. 207M 183/207 88.4% 207/94230402 0.0% 0/207 0.0% 37100317 NA +12069 chr4 + 190214555 98486731 98486730 98486904 174 TACTTACAAACTTGAGAAGGAAAGTGTTTTCCCGTAGCGCTCCAATGCACCCTGCAAATCCCAAAATGAACATCACTCCTCCCACCACAAGGAAGAGCCAAACTGGGTCAAAGCCGCCGAGATCGGTGATGGAAGAGATGTTGGACAGAACTCCCTGGGAGCAGAAAAGAACAC chr4 + 94230402 61383544 61383543 61383715 61383544 61383543 61383715 172 TACTTACAAATTTGAGAAGAAAGGTATTTTCTCTCAAAGCTCCAATGCATCCTGCAAATCCCAAAATGAACATAACTCCTCCTACCACTACGAAGAGCCAAACTGGATCAAAGCCACCCAGGTCAGTGATGGAAGAGATGTTGGACAGCACTCCCTGTGA--AAGAAACAACAC ..........:........:..:..:.....:.x:.:x...........:.......................x........:.....x.x...............:........:..x..:..:.......................x........x..--.::...x..... 160M2D12M 148/172 86.0% 172/94230402 0.0% 2/172 1.2% 37103187 NA +3034 chr4 + 190214555 98487011 98487010 98487063 53 TATGTGATTAATACTTAAGAGAGGAAAGAAAGAGAGAGAGAAAGAGAAAGAGA chr4 + 94230402 58693949 58693948 58694001 58693949 58693948 58694001 53 TGTGTGATAAATAATTCCTGGAGGAAAAAAAAAGAGAGAGAGAGAGAAAAAAA .:......x....x..xxx:.......:...:.........:.......:.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 39793062 NA +3685 chr4 + 190214555 98487025 98487024 98487149 125 TTAAGAGAGGAAAGAA---AGAGAGAGAGAAAGAGAAAGAGAAAGAA----------AGAGTGAGAAAGAAAGAGAAAGAGAGAGAAAGAGAAAAGAGAGAAACAA------AAGGGAGGAAGGGAGGAAGCGAGGAAGGGAGG chr4 + 94230402 51148374 51148373 51148516 51148374 51148373 51148516 143 TTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAG-GAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ..x.x...:::.....---.x.........:.........:.x....----------::.:..::.x.x::..:.x:.....:.:...::......-...::...:------:.:.x.x.....:...:....x.xx:...... 16M3I28M10I39M1D9M6I32M 86/124 69.4% 143/94230402 0.0% 20/124 16.1% 47338651 NA +3603 chr4 + 190214555 98491533 98491532 98491630 98 CACAAATGAGCTGCACGTGGTGGTACCTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033182 76033181 76033277 76033182 76033181 76033277 96 CATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x.:::x::..:::.....:.x:.--....:.:.........:..:........x.xx.x...x.:...........:..x:xx:..:..:.. 29M2D67M 63/96 65.6% 96/94230402 0.0% 2/96 2.1% 22458351 NA +4173 chr4 + 190214555 98492931 98492930 98493119 189 ACATTGGGAGGCCGAGGTAGGGGGATTGCCTGAAGCCAGAAGTTGAGACCAGCCTGGGCAATAAAA--CAAGACCCCATCTCTAGAAAAAATTTAA----ACATAAGTCAGGTACACTGGTGTGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGAAAGATCACTTGAGCCCACGAGTTGGAGGCTGCAG chr4 + 94230402 76033091 76033090 76033277 76033091 76033090 76033277 187 ACATTGGGAACCTGATTTGAGGAAGTAGACTGAA------AGAGGAGGGCAGA--AGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:x.:..xx.::..:::.x.x.....------..xx...:x...x--:....:....:--:.:.:x..::x:.:x:....:x..x...----.::x...xxx.:.....x.xx...::.x......:.:.........::........x.xx:x::.x.......:....x:..:.xx:.....:.. 34M6D13M2D11M2I28M4I95M 114/181 63.0% 187/94230402 0.0% 14/181 7.7% 22459840 NA +5956 chr4 + 190214555 98507665 98507664 98507783 119 ATATTCAACTTACTTTTTCATTCCATGCCCACAGTCCAATTCCAAGAAATGTTATTCCCAAAAACTGAA-AAAGAAAGAAAGCAGTGTAAATATAAGGGAAAATGCCGCTAATATAAAGA chr4 + 94230402 61392953 61392952 61393072 61392953 61392952 61393072 120 ATATTCAACTTACCTTTTCATTCCATGCCCACAATCCAATCCCAAGAAATGCTATGCCAAGGAACTAAAGAGAAAAAGAAAGGAAGAAAAATATCAGAATAGGAACTATAAATTCAGAGA .............:...................:......:..........:...x..x.::....:..-.:.:........x.:x:x......x..::x.::x:.:::x...x:.:... 69M1I50M 88/119 73.9% 120/94230402 0.0% 1/119 0.8% 37114712 NA +3807 chr4 + 190214555 98512072 98512071 98512155 84 ACGTGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::.........:--......:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 22478876 NA +3093 chr4 + 190214555 98541666 98541665 98541777 112 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAG----GAAAATGGGGGTTAAATCAGGAAACTAAACTTTATGCCACACTTTCTTGGGTGCCTGTGAAG chr4 + 94230402 44890382 44890381 44890489 44890382 44890381 44890489 108 CTCTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGCTAAACCAAATAGTGCAATC--------CACTTCCTTGGATCTTTGAAAGG ....x.::..x..::.............:...........::....:.x:----:....x:::x.:....:..::x.::xx..::--------.....:.....:.x::..x:.:. 50M4I31M8D23M 67/104 64.4% 108/94230402 0.0% 12/104 11.5% 53651284 NA +3095 chr4 + 190214555 98541676 98541675 98541711 36 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:...............:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 23241220 NA +3226 chr4 + 190214555 98541678 98541677 98541713 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................................:. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 23241222 NA +3135 chr4 + 190214555 98541680 98541679 98541714 35 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA chr4 + 94230402 75300456 75300455 75300490 75300456 75300455 75300490 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA ................:.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 23241224 NA +3207 chr4 + 190214555 98549268 98549267 98549312 45 TGGTTGTTTTATTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTG chr4 + 94230402 62526013 62526012 62526057 62526013 62526012 62526057 45 TAGTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTAGTTTTGTTTTG .:....x...x......................x.....x..... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 36023255 NA +3000 chr4 + 190214555 98549280 98549279 98549320 41 TTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTGTTTTTTTT chr4 + 94230402 82969138 82969137 82969178 82969138 82969137 82969178 41 TTTTGTTTGTTTGTTTGTTTTTGTTTTCTGTTTCCTTTTTT ...........................:.x..x::...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 15580142 NA +3454 chr4 + 190214555 98568403 98568402 98568484 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAGGAGAATCGTTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::..:.....x.xx.x...x.::.............x:xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 22535202 NA +7144 chr4 + 190214555 98572874 98572873 98573023 150 ACTCATGAGAAAGGGCCATGTCACAATCACAGT-----GATTTGTTTAAAGAATCTTGCCCACTGCATAATTAGCCTGTAGGTCACCATCTGTCTCTAAGTCCTCATAAAACTAACCATATGTTGTTTTCATCAAGGGCTGAACAAAAGTAACAT chr4 + 94230402 61419000 61418999 61419149 61419000 61418999 61419149 150 ACTTATGAGTAAT-----TATCACAACTATTATAAAAAGATTTGTTAAGAGAATTTTGGCTGTTATATAATTATCCTGTGGGTCACCATCTGTCTTTAGGTCTTCATAAAACTAAACATATGTTGTTTTCACCAACTGCTGTAGCAGATTCACAT ...:.....x..x-----.:......::.:x:.-----........x.:.....:...x.:::.::.......x.....:...............:..:...:............x...............:...xx....x.xx.:.x.x.... 13M5D15M5I117M 112/145 77.2% 150/94230402 0.0% 10/145 6.9% 37153874 NA +3390 chr4 + 190214555 98575933 98575932 98576011 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCACAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x::........::.:..x:x::.::..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 22542732 NA +5367 chr4 + 190214555 98629548 98629547 98629678 131 TATCCAAAGCACACTCCAGTATTATTAATTTAAGTTGCTGCTAAATCTCAAAAGTCATTAATAAAATGTAGTGATTTCTCAAATGGTTT-ATGGTCAGCCACTCTA--AGAGGTACTTAATAGAAAAGAATTAG chr4 + 94230402 61439652 61439651 61439785 61439652 61439651 61439785 134 TATTTCATGCAGAAGCCATTATCTTTAGCCTAAGATGTTGTTAAAGTTCAGAAGTCATTAACAAAATGTGGTGATTTCTTACATGGCTTAATGGTAGACCACATAAGTAGTGGTACTTAACGGATGGGCATTAG ...::x.x...x.xx...x...:x...:::....x..:..:....x:...:..........:.......:.........:.x....:..-.....x::....x:x.--..x.........::..x::.x..... 89M1I16M2I26M 94/131 71.8% 134/94230402 0.0% 3/131 2.3% 37189896 NA +10049 chr4 + 190214555 98653017 98653016 98653236 220 TATACCTTTCTTACACTTTTCCCATATGACACTTTCATAACCATATTTAGCTTTCTTCCTACCATCTCCCTGTAATTCAAAACGCAATTTAGATTCCCATATGGTTGCCATCGAAGCTAACAGATGTCTAGCAAATTAAAACAAAAATTATGACTTATAAACTGCTGATGTATCATCATTCCAGAACATCTTGCAATTTATAGTGAATCATAAGATAAAG chr4 + 94230402 61447616 61447615 61447835 61447616 61447615 61447835 220 TGCACTTTTCCAACACTTTTCCCACAATACACTTACATAACTTCATTCAGTTTTCTTTCTGCTGTCTTCTGGTAATTCAGAAGACTATTTAGACCCCCATACGGTTATGCTCAAAACCAGCACGTGTCAAGCAAAGTAAAATACAAATCGTGACTTGCAATATTCTGATGTATTGTAATGGCAGCACATCACATGGCTTAAAGCCAATCATCGGATAAAG .::..:....:x............:.xx......x......:x:...:..:......:..:.::...:.:x........:..x:.x.......::......:....::xx..:..:.:.:..x:....x......x.....:.x....::......::..xx.x.........::.x..xx...x.....x::::::...x..:x......x:....... 220M 153/220 69.5% 220/94230402 0.0% 0/220 0.0% 37205401 NA +3058 chr4 + 190214555 98657194 98657193 98657235 42 AGGAAAAGAATCAAAACAAACAAACAAACAAAAAGAGTAGGC chr4 + 94230402 44100011 44100010 44100052 44100011 44100010 44100052 42 AGAAAGAAGACCAAAACAAACAAACAAACAAAAAAAGCAGGC ..:..:.::.:.......................:..:.... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 54557183 NA +9250 chr4 + 190214555 98658106 98658105 98658255 150 CGGCCACAATAGTTGGAATCCCAGGAGCGCTCCAACTTACCCAAAATATGACATTGAAGCCAAATATGAAGTATTTGATGCAACAACTGACTTCAGGACCCTTGTAGTGCTTCCCGGACATCCTCTGGGTTCATGAAGACACTTGCCCCG chr4 + 94230402 61451410 61451409 61451559 61451410 61451409 61451559 150 CGACCTCCGCGGTGCGAGGCCGGGGGTTGCGCCCACTCACCCAGAAGATGACATTGAAGCCGAAGATGAAATATTTGATGCAACAACTGACTTCGGGCCCCTTGTAGTGCTTCCCGGACATCCTCTGCGCTCATGAAGACACTTTGCTCG ..:..x.x:::..xx..:x..x:..:x:..x..x...:.....:..x..............:..x.....:.......................:..x.............................x.:..............xx.:.. 150M 120/150 80.0% 150/94230402 0.0% 0/150 0.0% 37206696 NA +3031 chr4 + 190214555 98674959 98674958 98675022 64 CTGTTCAAATTATTTAGCCCTTTCCTGCCTTAGTTTCTCCATCTGTAAAATGGGAATATTAATA chr4 + 94230402 83501145 83501144 83501208 83501145 83501144 83501208 64 CTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTA ...xx.......:...:..:x.x:x.....:.....::...:...........::x.:x..:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 15173814 NA +3076 chr4 + 190214555 98692497 98692496 98692575 79 TCTGCCAAAAAA------AAAAAAAAAAAAAAAAAAAATCAGAAAGGCTCTTTTTGCACTCTCTTTCCTGAACGTTCATGTCAGC chr4 + 94230402 92134805 92134804 92134889 92134805 92134804 92134889 85 TCTGCCGAGAAGGGAGAGAAAAAAAAAAAGAAAAAAAAAGAGATTTCCTCTTTTCACCCTTTGTTTGCTGGATGTCTCTGACAGC ......:.:..:------...........:........xx...xxxx.......::.x..:.x...x...:.:..::x..x.... 12M6I67M 57/79 72.2% 85/94230402 0.0% 6/79 7.6% 6557692 NA +3596 chr4 + 190214555 98695587 98695586 98695660 74 GTGTGCTTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGAGAGAATCACCTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:.:.........::........x:xx.x...x...:...:..::.:..x..x:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 22662383 NA +3781 chr4 + 190214555 98706675 98706674 98706748 74 ATATAGATAGAGAGAGAGCGAGATAGATAAACAGATAGATAGACAGAGATATAGATATATCAGAAGGGATTTAC chr4 + 94230402 61196667 61196666 61196740 61196667 61196666 61196740 74 atatatataGAGAGAGAGAGAGAGAGATAGATATTTATATAGACATAGATATAGATAGAACAGCTAGAAGTTGC .....x............x....x.....:.:.xx..x.......x...........x.x...xx:.:.x..:. 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 37510008 NA +3647 chr4 + 190214555 98720402 98720401 98720474 73 TGCACCTGTAGTCCTAGCTACCCAACAGACTGGGGCAGGAGGATCACTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.:......:::.x..:...:.x.xx.x.:.x.......:.....:..:..x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 22687197 NA +3044 chr4 + 190214555 98760115 98760114 98760178 64 TCAATCCCCTATATAGTTTCTTTCTCTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 61527179 61527178 61527242 61527179 61527178 61527242 64 TCATTCCTCCATATAATGTTCTTTGTTTGTTTACCTCCTCTCTCTCTTTTTTTTTTTTTCATTT ...x...:.:.....:.x.::..:x:..x...x.:.::...:.:...............:x... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 37232936 NA +3126 chr4 + 190214555 98760118 98760117 98760206 89 ATCCCCTATATAGTTTC--TTTCTCTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGGAGACAGAGTTTCGCTTCACTCTTG chr4 + 94230402 68448579 68448578 68448668 68448579 68448578 68448668 90 ATCTTCTAT-TAATTTAAATTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTCCAGAAGCCTGAAGGACGTCCTACTTTTG ...::....-..:...x--......:.::::.x...............:...:.....:...::x.:..x.x..:xxx..::::...:... 9M1D7M2I72M 60/88 68.2% 90/94230402 0.0% 3/88 3.4% 30311539 NA +3104 chr4 + 190214555 98760124 98760123 98760179 56 TATATAGTTTCTTTCTCTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507628 80507627 80507683 80507628 80507627 80507683 56 TATTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT ...x..:.....x::..:.:...x..x..:......:........x.:........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 18252496 NA +3105 chr4 + 190214555 98760127 98760126 98760185 59 ATAGTTTCTTTCTCTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTT-TTTTGGAGA chr4 + 94230402 12818516 12818515 12818575 12818516 12818515 12818575 60 ATAAATTCTCTCTCTCTTTTTCTTTTTCAATTTCTTTCCTCTTTTTGCTTATTTTTGAGA ...:x....:.....:............xx.......::.:.....x:..-....x.... 50M1I9M 47/59 79.7% 60/94230402 0.0% 1/59 1.7% 85941611 NA +3041 chr4 + 190214555 98780022 98780021 98780085 64 ATCTTCCTGGTGAGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTTCA chr4 + 94230402 37981908 37981907 37981969 37981908 37981907 37981969 62 ATCTT--TGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTGCTTTCA .....--..x.....x.x...xxx...x.....:...............x...x.x..:..... 5M2D57M 50/62 80.6% 62/94230402 0.0% 2/62 3.2% 60798114 NA +3017 chr4 + 190214555 98797986 98797985 98798047 62 GCTTTTTCTTTGGACTTTCATGTCTTTGGAACTACTTCTTCCCTAAATTGTTGTTAAGGCTA chr4 + 94230402 80590443 80590442 80590504 80590443 80590442 80590504 62 GTTTCTTACTTGGATTTTTAGATTGTTGGAACTAATTCTTCCCTGAATTGCCACTAATGTCA .:..:..x:.....:...:.x:.:x.........x.........:.....::::...x.::. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 18207543 NA +3855 chr4 + 190214555 98828505 98828504 98828658 154 TAAAAAAATAAAGAAAGAAGAAAGAAGGAAAGAAAGAAAAA----GGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAA----AGAAAAGAAAA--------GAAAAGAAA-------AGAAAAGAAAAGAA-AAGAAAAGAAAAGAAAAAGAAATATTAATGTC chr4 + 94230402 65771147 65771146 65771324 65771147 65771146 65771324 178 TAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTC ....x...x.x.....x.xx.::x.:..xx..x......x.----:.....xx..:.:...:..:::..x:.....:.......x.x.:...----..:......:.--------.....x.:.-------..:..:.:.:....-...x..:..:x.x.:....x....x...x... 41M4I47M4I11M8I9M7I14M1I32M 108/154 70.1% 178/94230402 0.0% 24/154 15.6% 33057358 NA +3474 chr4 + 190214555 98828516 98828515 98828620 105 AGAAAGAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGA--AAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 90892097 90892096 90892203 90892097 90892096 90892203 107 AAAAGGAAAATAGAATAATCAAAGCAAAAAATAAGTAATATGCATCAGGTTTGAAAAGCAAGAAAGGAAAGAAAAGAAGCAGGAAGCAAAGATAGCAAAGGAAAAAA .:..:...:.x....x:.xx:..:x.....:x...x..x.x.x.--.:.xxx......x.......:...........:x:::...x.....x.:x...:.....:. 44M2I61M 71/105 67.6% 107/94230402 0.0% 2/105 1.9% 7936419 NA +3132 chr4 + 190214555 98828518 98828517 98828628 111 AAAGAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAA-AGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA---GAAAAGAAAAGAAAA chr4 + 94230402 54243848 54243847 54243961 54243848 54243847 54243961 114 AAATAGGAAAACCTGAAAGACAGCACATGGGAGAGTAGAGGGAAAAGGTGAGACTAATGAACGAAGGGAGCA-AAAAGGAAAGCAGAGAAAAGCCAAATTGAGAAGGAAAAAAGA ...x.:....:xxx......x..x.x.x..:...:-...:.....:::x..:.xx..x...x...::..:x.-.....:....x.:.......xx..---..:...:...:..:. 35M1I36M1D24M3I15M 75/110 68.2% 114/94230402 0.0% 5/110 4.5% 44584670 NA +3052 chr4 + 190214555 98828526 98828525 98828585 60 AAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGA chr4 + 94230402 61683536 61683535 61683595 61683536 61683535 61683595 60 AAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGA ..:......::...x........x.x:::..:........:x......:...:.:.x:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 37144990 NA +3162 chr4 + 190214555 98828545 98828544 98828620 76 AGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:.:..............::::.......x:x..::...xx.xx.x::.:.:..x:.....:....:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 60749767 NA +3426 chr4 + 190214555 98828549 98828548 98828624 76 AGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....::.:...:...x......x:..x...x.:..:....x::.x.x...x.x:............::...:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 27227523 NA +3117 chr4 + 190214555 98828561 98828560 98828618 58 AGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 69582232 69582231 69582289 69582232 69582231 69582289 58 AGAATGAAAAAAAAGAAAGAAAAAAAATGACAAAAATGACAACGAAAAGAGGAGAGAA ....x.....:............:...x..x..:..x::x..x.......::...:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 29246329 NA +3737 chr4 + 190214555 98829934 98829933 98830016 83 CATGGTGGTGCCTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......x:.--....:.:...........:.........x.xx.x...x..........::.:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 22796737 NA +3036 chr4 + 190214555 98835025 98835024 98835112 88 AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAGGAAGGAAGGAAAGAAAAAGAAAAGAAAGAGAAA chr4 + 94230402 11181426 11181425 11181513 11181426 11181425 11181513 88 AGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAAGTTGGTGAAA .::...x...::..:...x.x.x...x:..:.x::.:..x.x..:..:.:::...:..:..x:..........:x....xx:.x.... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 87653599 NA +3016 chr4 + 190214555 98835069 98835068 98835151 83 GAAGAAGGAAGGAAGGAAGGAAAGA--AAAAGAAAAGAAAG--AGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 58935728 58935727 58935814 58935728 58935727 58935814 87 GAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ......::x..x:.xx.......:.--..:..:..:....:--......x..::...:......x..x.x...::.:.....:::.. 25M2I14M2I44M 58/83 69.9% 87/94230402 0.0% 4/83 4.8% 39899341 NA +3510 chr4 + 190214555 98835088 98835087 98835183 96 GAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAATA chr4 + 94230402 65363859 65363858 65363955 65363859 65363858 65363955 97 GAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAGCCAACAGAACA ......:..:..x.xx.....:...x..:..:..:.:....x.x......:..xx:..:....:.-....:..x..x..:...x.:xx..x.:..:. 65M1I31M 66/96 68.8% 97/94230402 0.0% 1/96 1.0% 33471229 NA +3075 chr4 + 190214555 98835094 98835093 98835148 55 AAAAGAAAAGAAAGAGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 56724540 56724539 56724594 56724540 56724539 56724594 55 AAATGAAATGGAACAGACAAAAACAGAAAAAGAAGGAAAGAGGGAAAAAAATAAA ...x....x.:..x...x.:...x..........:......::....:...x... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 42110554 NA +3125 chr4 + 190214555 98835365 98835364 98835444 80 CATGGTGGCATGTACCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGCTCTCTTGAGCCCAGGAGGTTGACGCTG chr4 + 94230402 76033197 76033196 76033274 76033197 76033196 76033274 78 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::....--..:..x.:....:...........::........x:xx.x.:xx.x.....:.....:..x..x:x.... 8M2D70M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% 22802168 NA +3070 chr4 + 190214555 98837232 98837231 98837304 73 AGCAAAACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGAAGGTTAAGT chr4 + 94230402 37008638 37008637 37008710 37008638 37008637 37008710 73 AATAAACCTTTATCAGAGAGATGAATAATAAAAAAAAAAAACAAAGAAAAAAAATGAACCTTGAAAATCAAAT .::...x..:.::.xx.:.:.x:..x..x............x...:........x:..x......::.:..:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 61828594 NA +4049 chr4 + 190214555 98850707 98850706 98850778 72 GCACCTGTAGTTCTAGCTACCTGGGAGGCTGAGGTCAGAGGATCACTTGAGCCCAGGAGTTCCAGACTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x........:......:..::........x:.x.x.:.x.......:.....:..:.:::.:...:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 22817501 NA +3388 chr4 + 190214555 98850974 98850973 98851082 109 AGGAAGGAAAGAAGAAAGGAAGGAAGGGAGGGAAGGGAGAGGAGGGGAGGGAGGAAGGAAGGAAGGAGGGGAGGGAGGAAGGATAAAGAA---AGAAAGAGAAAGAAAGAGA chr4 + 94230402 985428 985427 985539 985428 985427 985539 112 AGGGAGGAAGTGGAACAACAGATAAGGGAAAGGCTGGAGAGCAGGGGATGGGGGAAGGAAGAGACAAAGGGAAGAACGGGAAAAACACAACCCAGGTAATGAAGAAAAGAGA ...:.....:x:::.x.:x.::x......::.:xx......x......x..:.........::.x:.:....:.:.x.::::.x.x.x..---..:x.:x...::....... 90M3I19M 68/109 62.4% 112/94230402 0.0% 3/109 2.8% 97865546 92349009 +3874 chr4 + 190214555 98851028 98851027 98851195 168 AAGGAAGGAAGGAGGGGAGGGAGGAAGGATAAAGAAAGAAAGAGAAAGAAAGAGAAAGAGAGAAAGAGAAAGAAGAACAAGAAAAAGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAAAGAAAAGAAAAG chr4 + 94230402 49044662 49044661 49044821 49044662 49044661 49044821 160 AGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAG--------AGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG .::...:::.:x.:.:..xx::..:x..x..:.:.:.x..:x..x:....:x.xx...x.......:...:--------..xx..........::.:::x....:.xx..::...........x...:x.:.:..xx..:.xx.:...::::.....x:.:x:.x... 71M8D89M 95/160 59.4% 160/94230402 0.0% 8/160 5.0% 49806366 NA +3026 chr4 + 190214555 98851052 98851051 98851147 96 AAGGATAAAGAAAGAAAGAGAAAGAAAGAGAAAGAGAGAAAGAGAAAGAAGAACAAGAAAAAGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAA chr4 + 94230402 89501659 89501658 89501754 89501659 89501658 89501754 96 AAGCTTCAAGAAAGCTTATAAAATGAAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAA ...xx.x.......xxx:x:...x:..:.x...:..:............::.......:.::.x.:..::.::xx:...x:..xx::.....x... 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 9349393 NA +3794 chr4 + 190214555 98851057 98851056 98851180 124 TAAAGAAAGAAAGAGAAAGAAAGAGAAAGAGAGAAAGAGAAAGAAGAACAAGA---AAAAGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAAGAAAGAAAGAA-AGAAAAGAAAGAAAGAAAGAAG chr4 + 94230402 51148376 51148375 51148503 51148376 51148375 51148503 128 TACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ..x........::..xx.x.:.....:...........:.x.....xx..::.---...x.:..x.x:...::x..:....x..:..::.:..:..::..x..x.-xxx:...x.x...:...:.:.. 53M3I49M1I22M 82/124 66.1% 128/94230402 0.0% 4/124 3.2% 47702681 NA +3404 chr4 + 190214555 98851087 98851086 98851220 134 GAGAAAGAGAAAGAAGAACAAGAAAA-AGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAAAGAAAAGAAAAGAAGTGGATGATTGTTGTGAAGAAAA chr4 + 94230402 78266949 78266948 78267083 78266949 78266948 78267083 135 GACAGAGATAAATCAGCCTAAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAACATTATGAAAACAA ..x.:...x...xx..xx:.......-.:.:.xx..:.:...:..xx..x.:.:......:.......:......x.xx:.:.xx.::x...x.x....:x..xx..:xx..x..:..:.x::..:....:.x.. 26M1I108M 84/134 62.7% 135/94230402 0.0% 1/134 0.7% 20584138 NA +3046 chr4 + 190214555 98857603 98857602 98857669 67 TCTCTAAAAATACACACACACACACACACACACACACACACACACACACACAGAATTAAATTAATGA chr4 + 94230402 24017429 24017428 24017495 24017429 24017428 24017495 67 TCATTGAAAATAAATAAACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGA ..x:.:......x.:.x...:.:..............x.x:......x:.x..:.x..x..:x.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 74840174 NA +3005 chr4 + 190214555 98857604 98857603 98857655 52 CTCTAAAAATACACACACACACACACACACACACACACACACACACACACAG chr4 + 94230402 66743628 66743627 66743679 66743628 66743627 66743679 52 CTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAG ..:..x.....x.:...:x:....x...x..x:................... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 32113976 NA +3473 chr4 + 190214555 98862999 98862998 98863077 79 GTGATGCAGGCCTGTAGCCCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCTGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....x.--.....::........:..::........x:xx.x.:.x.......:...x.:..x..x:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 22829798 NA +3454 chr4 + 190214555 98863615 98863614 98863697 83 CGTGGTGGCACATGCCAGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.:--...:.:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 22830418 NA +3945 chr4 + 190214555 98866889 98866888 98866989 101 CGTGGTGGTGGGTGCCTGTAATTCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATGGCGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::......x::.--....:...........:..:........x.xx.x...x.............:..x.xx:..:..:..------..x...::.... 14M2D67M6D12M 69/93 74.2% 93/94230402 0.0% 8/93 8.6% 22833692 NA +3143 chr4 + 190214555 98875721 98875720 98875779 59 GCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAAGAGAATCGTTTGATCCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:.........:..:........x.xx.x...x.::....x...:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 22842515 NA +77870 chr4 + 190214555 98879838 98879837 98881185 1348 AAAAAACAAAGATAGCCACATCAATTTAATTCCAT----ATATATGATACTACCTATTCAATTTATTAAAAATTGTAATAAACATAATAATCAAACTAGTGCTCCAAACTTATGCTGTTCACATGGAAGACACCACAAAAGAAGACATAATATAGAGACTGCCTTGCAATAAGAAGTACAAATTCCTTCTATAAAGATGGAGAAATAAAAGGACAAATCTAGTTGTCTAAAAGACAATTCACTGTACACATTTTATTTACAGTTTTGTACACTGTCTTAATATGAATGGGACTGCTTTTCTACTTGAGCCATTTTTAACCAAAGCAAAATAACCTAAGTAATACAAAGTGTTAAAATACAGCATAAAGATACAAAAACAGACATACTAATTCTAGTTAGGAATGT-AATTATGATGTTACATT-TTTTATAATCCACAATTATGTTTAGGAAATCACACAAACATAGATCACTG-ATTTGAATGAAATGCATAAATTTGTAGCAAAGCTTTGTAGTTACAAAAAACAAAAAAAATTACCAAAGAATGCACAAAATTAATGTTTATTCCACCTTTGTGTCATATTCCTGGATCCTTCACCAATGTTACATGAGGAAAAAAACAAAAGCAAAACAAATGAAAAACTGAAATCA--GAATCACTAATATTATCAAGTAGGG-AAACAAATAAATTAAAATCTAGCAGCCATCAGCA-AGAGTACAGCAAAGACAATGCTGTAAAAAGAAACAAAGAAAATTGCTAGAAAACTGTATGCATCATAATCTTT--CAAACCAGCAAAATATGCTTCTGCATAAAATG-----GAACAACAGAATTTTTTTTCCTGTAAAGTATAGAAATGCCAAGTTGTTTTCTGACTATTGTGGATAGGTAAA-ATCTGTATGTAATTAATGGTAATTCTACTGAACTATTACAGAGTGGGCCAGGAACACATTTATGGATTCTGGGGATGTGTACTGTAATTCTTTGATTGGGATAGTGGAAACTCTAGCCAAAAAAAAAAAAAAAAATGAACACAGAAGTACAAGACAAAGGCGAATGAGACTTCTCTTATATCTGAGTAACATTAAGATGGAAATCAAATTTAAATGCAGTCCACTCTGCTTTTTGAAGAGGCTTTGGTTCAGCTCCCAAATCTCGATTGCTTGACGCAGTCTCCTATG--AGAATACTCAGAAGGTGTCTTCTTAAACAACAAACCTATTTTTAGTGGTGGAGCCGCTCTTAGTAGCTGTGTCTGCGTGGGACTGATAACCAATCACTATCTTTGGAGGAAGTCCTAACCTTTCCTTGTATACCCTCCTAGAAGAAAAAAAAAAAGAAGAAGAA-----------------AAAAGTAGTCATTAAC chr4 + 94230402 61479589 61479588 61480894 61479589 61479588 61480894 1306 AAGAGAAAACAGTAGCCACATCAATATAACTTCACTTTCATTTAGGGTGCTATCTAATGGATTTAGTAAAAGTTTCAATAAAC-------------CATAGCTCCAGACTCAT----CTTTCTTGGAAGACACTACAAGAGAAGCCACAGCA--GAGACTGCCTTGTCACAAGAAGTACAAATACTTGCTGTGCAGATGGAGAAATAAAAGGACAAATCTAGTTGTCTAAAAGACAATTCACTGTACACATTTTATTTACAGTTTTGTACACTGTCTTAATATGAATGGGACCGCTTTTCTACTTGAGCCA-TTTTAACCAAAGCAAAATAACCTAAGTAATACAAAGTGTTAAAATACAGCAT-AAGATACAAAAACAGACATACTATTTCTAGTAAGGAATGTAAATTATGGTGTTACATTAAAAAAAAATCCACAATTATGATTAGGAAATCACACAAAC--AGATCACTGAATTTGACTGAAATGCATAAATTTGTATCAAAGCTTCGATGTTA-AAAAAAC--AAAAAATTACCAAAGAATGCACAAAATTAATGTTTATTCCACCTT--TGTCATATTCCCAGATTCTTCACCAATGTTACATGAGCAAA---------------------AACAACTGAAATCAATATATCACTAATGTTATCAAATAGGGAAAACAAATAAATT--AATCTAGCAGCCATCAGCATAGGTTACAGCAAAGGTGATGCTGTATAAA---------AAAATTGCTAGAAAACTGTATGCACCATACTCTTTTCCAAACCAGCAAA--ATGTTACTGCATACAATGCAAATGTAAAACAGAG--TAATTTCCTGC-AGGTACAGAAATGCAAC----TTTTCTGAATACTGTGGATAAACAAATGTTTTTTTGTAA-TAGTAATGTTTCTATCAAGCTATTACAGAGTGGGCCAGGAAAACATTTAT-GACTCAGGGGG-GTGTACTAAAATTC--TGATTGG--TAATGGTTACTTCAGCC-AAAATAGAAAAAAAAATGAACACAGAAGTACAAGACAAAGGCGAATTAGACTTCTCACAAATCTTAGCAACATTTAGATGGAAATCAAATTTAAATGTAGTCCACTCTGC-TTTTGAAGAGGCTTTGGTTCAGCTCCCAAATCTCGATTGCTTGACGCAGTCTCCTATGAAAGAATACTCAGAAGGTGTCTTCTTAAACAACAAACCTATTTTTAGTGGTGGAGCCGCTCTTAGTAGCTGTGTCTGCATGGGACTGATAACCAATCACTATCTTTGGAGGAAGTCCTAATCTTTCCTTGTATACTCTCCTGGA--GAAGAGAAACAGAAGAATAATTTAAGCAAAACTCTTCAAAAGGAATCAGTAAC ..:.:.x..x::.............x...:.:..:----..x..x.:.:...:...x.x:.....x.....:..x:.......-------------:.xx......:...:..----:.:x.x..........:....:.....x..:.::.--............:x.:.............x.:.x..:.:x..................................................................................................:..................-....................................................-.......................x.......x........-.......:.........-xxxx.x..............x..................--.........-......x...................x........:.xx....-.......--.............................................--...........::...:....................x...---------------------..x...........--:x.........:.......:.....-.............--...................-..:x..........:::........x...---------........................:....x.....--............--...:.x.......x....-----.x.x......:--.xx.......:-.:...:........x.x----........x..:........:::...-:.:.x.x.....-..:.::.:x.....:::.:......................x........-..:..x....:-.......:x.....--.......--..:...xx...::....-....x.:.......................................x.........x:.x....x..:......x......................:............-..........................................................--............................................................................:.........................................:..............:.....:..--:..:.:...x.......x..-----------------.....x.:...x.... 35M4I44M13D17M4D35M2D157M1D52M1D40M1I17M1I39M2D9M1I43M1D7M2D45M2D41M21D14M2I25M1I13M2D19M1I29M9D35M2I12M2D18M5I11M2D11M1D17M4D26M1I12M1D50M1D11M1D14M2D7M2D17M1D110M1D58M2I142M2D20M17I16M 1126/1268 88.8% 1306/94230402 0.0% 118/1268 9.3% 37400249 NA +3063 chr4 + 190214555 98884564 98884563 98884646 83 CATGGTGGCATGCGCCTGTATTCCCAGCTACTCGGGAGGCTGAGACATAACAATCTCCTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....x.:.........:.::........x.x.:xx..x.x.:.......:.:..x:xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 22851367 NA +12618 chr4 + 190214555 98884902 98884901 98885073 172 AGGCAAAGAGCAAAACTTACCCTATATGTGTAACAGCTTCTCTGTTTTCACATTCAGTAGTCCATATTGCTATCTTATCACCTTTAGCTCTAACATTAACAACAGCGCCACATACATCATCACTGTAGTCATCAAAAGATTCTCCAATAAGGCACAGAAGCTTAAAAAAAAA chr4 + 94230402 61482562 61482561 61482733 61482562 61482561 61482733 172 AAGCAAATCACATTACTTACCCTATATGCGTAACAGCATCCCTGTTTTCACATTCAGTTGTCCATATTGCTATTTTATCACCTTTAGTTCTAACATTAACAACAGCACCACATACATCATCGCTGTAGTCATCAAATGACTCCCCAATAAGGCACAGCAGCTACAAAATAAA .:.....xx:..xx..............:........x..:.................x..............:.............:..................:..............:..............x..:..:..............x....xx....x... 172M 151/172 87.8% 172/94230402 0.0% 0/172 0.0% 37402340 NA +3356 chr4 + 190214555 98886023 98886022 98886082 60 TGCACCTGTAGTCCCAGCTACTTGAGAGGCTAAGGCAGGATGATTGCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x......:............:.....:..x.xx.xx:.x::...........:.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 22852818 NA +3610 chr4 + 190214555 98886575 98886574 98886644 70 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTAAGAGGCTGAAGTGGGAGGATCACTTGAACCCAGAGG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x......:..........:.:.......:x:xx.x.:.x..............:. 8M2D60M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 22853378 NA +10175 chr4 + 190214555 98887063 98887062 98887215 153 ACTTTTAAAACC-------TTACTGTCTCTAGCCAAAAGCGATCGAGGTCACTTCGTCTCTGCTGTTTGTTCAATGTAATTAGCCATCGTCCTCCCCGTTTGTTTTTCTCATCTTCCCACATAGGCTCAATACCATCCTACAGGGTTAGAAGACAACAGT chr4 + 94230402 61485088 61485087 61485238 61485088 61485087 61485238 151 ACTTTTAAGGCCACATTACTTACTGTCTCTAGCCAGAAGCGATCAAGGTCACTTCGTCTCTGCTGTTTGGTTAGTGTAATTAGCCATCGGCCTCCTCGCTTGTTTTTCTCATCTTCCCACATGGGTTCAATCCCATCCT---------GAAACCAACAGT ........::..-------................:........:........................x.:.:...............x.....:..:.......................:..:.....x.......---------...:x....... 12M7I120M9D12M 129/144 89.6% 151/94230402 0.0% 16/144 11.1% 37401975 NA +6938 chr4 + 190214555 98887881 98887880 98888058 178 AAGCATACCTTAAAAAGTGAGTAGTCACAGCCAGGCATTAAATTACTAGACAACTGGATATGGTTGTACAGACTA---GGTAAAAGAAAATAACAATTAAAAACACAGAATATGTAATATAGAGTTTAGGTGCTTACATATATATACATTTAGAACATA--TGATGAAAATAAACAGATAAAA chr4 + 94230402 61487124 61487123 61487298 61487124 61487123 61487298 175 AAGCATACCTTAAACAGCGAGTAGTCACAACCAGGCATTAAATTACTAGAGAGCTGGATATGGTTGTATAAACTATTGGAGGGAAAAACAGCACGATTAAAAACTAAGCAT---TATTTTAAGGTACAGAAACTCTTACAGA-----ATTTAGGACATGACTGAATAAAATATAAACATTAAA ..............x..:...........:....................x.:...............:.:....---.:x::..:..x.xx..:.........xx..x..---..x.x..::..x:..:x:..:x:.:.x.-----......:....:--...xx......x.x.x..x... 75M3I33M3D28M5D12M2I22M 129/170 75.9% 175/94230402 0.0% 13/170 7.6% 37400757 NA +3339 chr4 + 190214555 98889029 98889028 98889101 73 TGCGCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAAAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........x.::........x.xx.x:..x.:...........:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 22855824 NA +9570 chr4 + 190214555 98891211 98891210 98891359 149 ACATACTAAAACAAATGGTTACTTACGCCCAAAAGTCTTCAACAGTATCAAACTTGGAGATCAGCCGCAGGTTTGCTTGCCAAGTTTTGCTTTTATCATTTTTAAAAAACCAGAGTGCCCATCTAAA----AATAAAAAATCAGTGTCAAAAA chr4 + 94230402 61488794 61488793 61488944 61488794 61488793 61488944 151 ACAGACTCAAACA--CGTTTACTTACGCCCAAAAATCTTCAACAGTATCAAACTTGGAAATCAGACGAAGATTTGCTTGCCAAGTTTTGCTCTTGTCATTTTTAAAAAACCAGAGCGCCCATCTAAAGGAGAACAGAATAACAGAATCTAGAA ...x...x.....--:.x................:.......................:.....x..x..:....................:..:....................:...........----..:.:..x.x...x:..x.:.. 13M2D112M4I22M 127/147 86.4% 151/94230402 0.0% 6/147 4.1% 37402417 NA +6194 chr4 + 190214555 98901871 98901870 98901999 129 CTTACCTGTTCTGTAGGGGATGTTTAATATAGTGTTCTGGGTTAGCAACCTCCTGATTA------GATTCCGTTTTCTCCTCTTCTGTAGTCGGGGGATTAGGAGTAGGGGTGGTTTCCTAGTGGAAAATAATAT chr4 + 94230402 61490352 61490351 61490480 61490352 61490351 61490480 129 CTCACCTGTTTTGTAGTGGATGCTTAATATACTGTTCAGGGCTGGCAACCTCCTGAGTAGGCGCTGGCTCGGTTTTCTCCTCTTCTGAAGGTTGAGGGTTGGGA------GTGGTTTCCTGTTTGAAGAAAGGAT ..:.......:.....x.....:........x.....x...:.:............x..------.::..x................x..x:x.:..:..:...------..........:x.x...:.x.:x.. 59M6I39M6D25M 97/123 78.9% 129/94230402 0.0% 12/123 9.8% 37411519 NA +3746 chr4 + 190214555 98914216 98914215 98914298 83 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGAGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:...........::........x.xx.x...x.............:..xxxx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 22881019 NA +3582 chr4 + 190214555 98916051 98916050 98916151 101 CATGGTGGTGGGCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGTGGGATAATCACTTGAACCTAAGAGACAGAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::......--...x....:.:.........:..:........x:xx.xx..x..........:.::..x:xx:..:..:..------..x...:..... 10M2D71M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 22882854 NA +3105 chr4 + 190214555 98917079 98917078 98917139 61 TCTAAACACACACACACACACACACACACACACACACACACACACACACACACACAAAAAA chr4 + 94230402 12801915 12801914 12801975 12801915 12801914 12801975 61 TTTAAACATCCAAACACAATTGTACGTATACATGACCATACACACACACACACACAAAAAA .:......:x..x.....xx:::..::.:...::xx..:...................... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 86115164 NA +3020 chr4 + 190214555 98919314 98919313 98919353 40 CAGAAACAAAAAGACTAGCAAAAAAAAAAAAAACAAAAAA chr4 + 94230402 57434580 57434579 57434619 57434580 57434579 57434619 40 CAGAAACAAAAGGTCTAGTAAAAAAAAAAAAAAGAAAAAA ...........:.x....:..............x...... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 41484734 NA +3395 chr4 + 190214555 98927525 98927524 98927586 62 GCGCACCTGTAATCCCAGCTACTCAAGAGGCTGAAGCAGGAGAATCGCTTGAACCCGGAGGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:....x....:.:.........::.:.......:x.xx.x...x.:.........:..:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 22894321 NA +3033 chr4 + 190214555 98927631 98927630 98927706 76 GGCGACAAAGCAAGACTC-----CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTTTAAAAGTCAAAGCAA chr4 + 94230402 78351026 78351025 78351106 78351026 78351025 78351106 81 GATAATAAAGCAAAATACAGAGGTACTGTAAAAGAAAAAACAAACAAAAAACAAACAAAAAACCACTAAAGGTTAAAGCAA .:::.:.......:.:x.-----:.::x:....:......x...x......x...x.....::.x:....:..:....... 18M5I58M 53/76 69.7% 81/94230402 0.0% 5/76 6.6% 20576605 NA +3408 chr4 + 190214555 98935162 98935161 98935222 61 GTGCACCTGTAGTCCCAGCTATTCAGGAGACTGAGGCAGGAGAATCACTTAAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.......:.::::..:.....x.xx.x...x.....:.......:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 22901958 NA +3681 chr4 + 190214555 98937572 98937571 98937645 74 GTGCACCTATAGTCCGAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:.x.........::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 22904368 NA +3090 chr4 + 190214555 98945532 98945531 98945595 64 TTTTGGTATGAGAGAGAATCTCAAGTGGTCAAAATCAAAAGAAAAAAAGTAAATTGTGTCCTAA chr4 + 94230402 391872 391871 391935 391872 391871 391935 64 TTTGGGTATGGGAGAAAACTTCAAATACTCATAATCAGAAAAAAAAAAAAAAAAAGTTCTCTAA ...x......:....:..::....:.:x...x.....:..:.......:x...xx..x::.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 98553660 91660895 +3706 chr4 + 190214555 98948630 98948629 98948701 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 22915424 NA +3032 chr4 + 190214555 98949136 98949135 98949174 39 AAAACAAACAAACAAACAAAAAGGAAAAAGAAAAAAGAT chr4 + 94230402 25733612 25733611 25733650 25733612 25733611 25733650 39 AAAACAAACAAACAAACAAAACAAAAAAAGGAAAAAGAT .....................x::......:........ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 73215524 NA +3436 chr4 + 190214555 98949683 98949682 98949765 83 CATGGTGGCGCGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAACCCAGGAGGCAGAGATTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:..::.--......:.:.........::........x.xx.x...x:::..........:..x:xx:.::..... 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 22916486 NA +3302 chr4 + 190214555 98950621 98950620 98950693 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGTCAGGAAAGTCACTTGATCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........:.xx.x:.:x.......x.....:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 22917416 NA +3057 chr4 + 190214555 98953104 98953103 98953161 58 TGGACTTCTTTTTTCTCTCTCTCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59557950 59557949 59558007 59557950 59557949 59558007 58 TGTGTTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT ..x::....:x....:::.:...:......:.........::x......:.....x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 39395154 NA +3081 chr4 + 190214555 98953116 98953115 98953171 56 TTCTCTCTCTCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 + 94230402 51335344 51335343 51335399 51335344 51335343 51335399 56 TTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAAAAAAA .....x:.........x.:..............::..:...::.:...x.:.x.:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 47617772 NA +3381 chr4 + 190214555 98956467 98956466 98956545 79 GTGGTGCGCCCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATCGCTTGAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.x--......:...........::........x.xx:x...x.:.........x.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 22923266 NA +3023 chr4 + 190214555 98956593 98956592 98956647 55 CTCTGTCTCAAAAAAAAAAAAAAAAAAAACCCCAACAGAATAAATTGCAGACTGA chr4 + 94230402 82267703 82267702 82267757 82267703 82267702 82267757 55 CTCAATTTCAAAAACAAAAACAAAAAAAACCCCAAACAAATAATTTACAGAATAA ...x:.:.......x.....x..............xx:.....x..:....x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 16688890 NA +3130 chr4 + 190214555 98956601 98956600 98956652 52 CAAAAAAAAAAAAAAAAAAAACCCCAACAGAATAAATTGCAGACTGATTCCA chr4 + 94230402 47547225 47547224 47547276 47547225 47547224 47547276 52 CAAAAAGAAAAAAAAAAAAAACCAAAACAAAACAAACGACAGGCTGTTTCTA ......:................xx....:..:...:x:...:...x...:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 51409376 NA +3000 chr4 + 190214555 98957584 98957583 98957639 56 GATGGGAAAAAAAGATTTAAGCTTTACACTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33887301 33887300 33887356 33887301 33887300 33887356 56 GATTAAAATAATTAACTTAAGCTTGGCACTTTCTCTTTTTTTTTTTTTTCTCCTTT ...x::..x..xx:.:........x:........:..............:.::... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 65070283 NA +3268 chr4 + 190214555 98960379 98960378 98960453 75 GTGCACCTGTAATCCCAGCTACCCAGGAGGCTGAGGCAGGGGAATTGCTTGAACCAGGGAGGTAGAAGTTGTAGA chr4 + 94230402 76033204 76033203 76033278 76033204 76033203 76033278 75 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ......x....:.:........:::::........x.xx.x...x::........x:.:..x.xx::.:...... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 22927175 NA +3261 chr4 + 190214555 98961634 98961633 98961744 111 GGTATTTTGTTACAGCAGCACAAATGGACTAAAC-------------CACAAAAAAAGAAAAAAATACAATCTTCTATTTCTAAGAAACATATAACATGTTTGTATAAGACCTTATTTTCCTCT chr4 + 94230402 57695550 57695549 57695673 57695550 57695549 57695673 124 GGCGTTATGAAAGAGTAGCAGAAACAGATCTGACAAGTTGGGGATTCCACTCATAAAGAAAAAAATAAATTCTTTTGTTTACAATAAACATATTACATATGAGAGCAAAACATGACTTTTTTCT ..::..x..xx.x..:....x...::..::x:..-------------...xx.x.............x.x....:.:...x:..x........x....:.xx.x::..:..x.x.:...::... 34M13I77M 74/111 66.7% 124/94230402 0.0% 13/111 11.7% 41266084 NA +3691 chr4 + 190214555 98964822 98964821 98964900 79 GTGGTACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:..:.--....:.:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 22931621 NA +3209 chr4 + 190214555 98991975 98991974 98992066 92 AGACCAGCCTGGGCAACATAGGGAGACCCTGTTGCTATTAAAAAAA-----AAAAAAAAAAAAAAAAATATATATATATATATATATATATATCTCC chr4 + 94230402 88547272 88547271 88547366 88547272 88547271 88547366 95 AAAGCAGCCCTAACACCATAA--CAACCCCATAACAACCAGAAAACTCCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATATCACC .:.x.....:x::..x....:--x:....::.x:.x.::.:....x-----................x:........:...:.:.:.:......x.. 21M2D23M5I46M 63/90 70.0% 95/94230402 0.0% 7/90 7.8% 10444703 NA +3217 chr4 + 190214555 98992014 98992013 98992061 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 97497014 92717541 +9792 chr4 + 190214555 98995702 98995701 98996420 719 CTCCCGCCGCCGCCTCTTCCTCGGTGAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGGAGACGCGG-GTGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTGCTCGCAGGT-AGGCGCCCGCTGCCCCGCGGATATGCCGCCGCTGCGGGACCCCTCCTCGCTTCTCCCCTGCTGGCTCCTCCCGCCCTTGCGGCGAGTCGGGACGCGCTCCTCCTCTTCCCCCCGGCCGCGTTTCCTCCTCCCCCCACCCGCGTCGCCACCGCCCCCTCCTGCCTCCTGGGGTCCCTGGGTCCTCGGGAACCGCGCTGGGCTCAC-GCGGGGGCGGG--------GGCGCCACCCGCCGCGGCCATG--TGGGCTG-GGGCGGAAGCGGGCTGTGCG----GGGTCGCGTGGCCGCGCTAGACCTCCGCGTTCTGGGGCCGGTTCCCCGCGCTGGGGCGGG---GGCCGCCAGGTGTGCGGGCTGCCGGAGGCAGGTAGCGGCGCCGG-------------------GAAGGAGGGCA--GCCCGAGCGTC----GCGAGC---------CTCCACATCCGCAGCACCGG-CGGGGCTCGGGTCTGGGCGCTGGAGGCGCCGGGCCGTCCGTCGGGTCCCTGCGGGGTGGGGGGCTGAAGCTACCTGCCGGGCTCTGAGAGATGGGTGGCCCGAGGACCGTCGGAGTCGCAGAGAGGAGGAACGCT chr4 + 94230402 61512252 61512251 61512936 61512252 61512251 61512936 685 CCCCCGCCGC----------TCGCCGCGCCGCGCCTGTGGCACCCCGGCAGCATCCCTTAAGTGGAGACCCCGCGTCTGCGAGACGGCGGGCTGTAGCAGCGAGGCCAAGCTGCACTGCCCCACCTGTCTCAAGCTGGGCATCCAGGGCTCCTATTTCTGCTCTCAGGTGAGGCCCCGGCGACGCCGC-----TCTCGCCT--------TCTCGCCCCGCTTCCTCCCCGCT--TCCCGCTCGCCCTGCCGGT--TTCGAGGGGCGCCCGTGCGGTGCCC----GCTGCGG-----------------------GCCGGCCCTCCCTCACGGCCCCGGGGAGCTGCG-------AggcgccgggccgggctggcggcggcggcAGGTGTCGGCCAGAGCCCCTCGCCGGGCCCGTGGCCGGTTTGCGTGCGGGAGCACCCTCTGCTCCTCGGCTCCGGGTGCGGCGTTGG------GAGCTCGGGTAGCGCTGCCCCGCGCCGGAGGGCGCTTTGCCTCCCTCCGGGAGGAAACGTGGAGGCGGGGAGGGACGCTGTGGTGAGATTTCCAGTCGGCGAATGAGACCGGTGCGCGAGTGCCGGCGGCGGGCTGCTCCCCGCCTCGCGTGCCTCACGCCGGCCTGGGCTCGGCTCTCGGCG-----GGCGCGGATCTGCCGCTCGG--CCCCGCGG-----------GAAGTTCCCCGCCCGG----GGGAGGCGGGGACGCCTCGGCTCGGCGT-GCCGCGGCGCAGGGAAAGGCT .:........----------...x:.x.x...x.:.x::..:xx.x........xx.xxxx........x.x.-..x........:.xx.....:.....:...........x..x..:.....:..:x......................x..:........x.....-....x..x..x:.x....-----.x:....x--------:.:.x..:......::...:...--::..x.:......xx...:--x...:.:x....:.x.x.xx.x...----..:...x-----------------------...:x.x.:.....x:.x.:..x...:x.:x:.-------:..x:...x..:.....x:.-....x...:..--------:.x...x.:.....x.x..:..--:..x:..-.x....:...:xx..x...x----..x..xx.xx..x...:.:.------.x.:..x..x:x..x.x........:..:.x.x.---x...x..xxx:.x.x..:xxxx:......:..x..x.:...:.x-------------------...x...:x.:--..x....:.:.----...:..---------.::.:.:.x.x:x:.:....-.x........x...x....-----.....x.:x.:.:.xx....--...:....-----------....:.x..:...x..----.:...::...x:xx..xx..x:..x..x-.:...:.x.x:.:.:..x... 10M10D53M1I95M1I18M5D8M8D23M2D19M2D25M4D7M23D33M7D20M1I11M8I22M2I7M1I20M4I20M6D34M3I44M19I11M2I11M4I6M9I20M1I19M5D20M2D8M11D16M4D28M1D21M 424/629 67.4% 685/94230402 0.0% 146/629 23.2% 37483450 NA +3037 chr4 + 190214555 98998525 98998524 98998600 76 GAAAAAAACAAAAACAAAACAAAACAAAAAACCAAAAAGAAGAAATTAGGGATTTTCCTTAACACTTCTGTGATCA chr4 + 94230402 32283597 32283596 32283669 32283597 32283596 32283669 73 GAAAAAAACAA---CACAACAAAACAAAAAACCAAAAACAAAAAACAACCCCTTTGACATAATACTGTTGGTATCA ...........---..x.....................x..:...:x.xxxx...xx.x...:...x:..xx.... 11M3D62M 56/73 76.7% 73/94230402 0.0% 3/73 4.1% 66714928 NA +3066 chr4 + 190214555 98998528 98998527 98998571 44 AAAAACAAAAACAAAACAAAACAAAAAACCAAAAAGAAGAAATT chr4 + 94230402 44952962 44952961 44953005 44952962 44952961 44953005 44 AAAAACCAAACCAAAACAAAACAAAAAACCAAAGGAAACAAATT ......x...x......................:::..x..... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 54045566 NA +3071 chr4 + 190214555 99004441 99004440 99004498 58 ACAGATACACACACACACACACACACACACACACACACACACATACACACACACACAC chr4 + 94230402 54963204 54963203 54963261 54963204 54963203 54963261 58 ACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ......:.....x:.:.:...........xx...:::.:.x..........:x:.:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 44041237 NA +3087 chr4 + 190214555 99011800 99011799 99011869 70 CGTGGTGGCATATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:::.:.--....:.:.........:..:........x.xx.x...x::........:..:.. 14M2D54M 48/68 70.6% 68/94230402 0.0% 2/68 2.9% 22978603 NA +5650 chr4 + 190214555 99028851 99028850 99028924 74 TTTTTTGTTCTTTTAGGAATGTTTTAAAGGAAGTTGGGCTACTCACAAGTTACTACATAAGAAAGCAAGTAAGT chr4 + 94230402 61522372 61522371 61522445 61522372 61522371 61522445 74 TTTTTTGCAATTCTAGGAATGCTTTAAGGGAAGCTGGGCTACTCACAAGTTATTACACAAGAAAGCAAGTAAGT .......:xx..:........:.....:.....:..................:....:................ 74M 65/74 87.8% 74/94230402 0.0% 0/74 0.0% 37506479 NA +8278 chr4 + 190214555 99034208 99034207 99034350 143 TATCTATTCCTCCGTCTCCCAGAAGATGAAAAGGCGAAGCGAGAAGTGTCTTCCTGGACTGTGGAAGGTGATATTAATACTGACCCATGGGCAGGTTATCGATATACTGGTAAACTCAGACCACATTATCCACTGGTGAGTAA chr4 + 94230402 61524538 61524537 61524678 61524538 61524537 61524678 141 tatttattttGTCTTTTC--AGAAGATGAAAAAGCTAAACGTGAAGTATCCTCTTGGACCCTGGAAGGTGACATCAACACAAATCCCTGGTCTGGTTATCGATATACTGGAAAACTCAGGCCACATTATCCTCTGGTAAGTAA ...:....::x:.x.:..--............:..x..:..x.....:..:..:.....:x..........:..:..:..x:.:..x...x.x.................x........:...........x.....:..... 18M2D123M 112/141 79.4% 141/94230402 0.0% 2/141 1.4% 37509670 NA +5602 chr4 + 190214555 99035390 99035389 99035464 75 TTGTTTTTAGATGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGACCAGATTATGCTGATCATCCCTTAGGTAA chr4 + 94230402 61525997 61525996 61526071 61525997 61525996 61526071 75 TTTTATTTAGACACCAACAAGACCTGTGCCAAGTTATATTCAGAGACCAGATTATGCTGATCATCCACTAGGTAA ..x.x......::........:..x.................:.......................x:....... 75M 66/75 88.0% 75/94230402 0.0% 0/75 0.0% 37509393 NA +7238 chr4 + 190214555 99039362 99039361 99039486 125 TTTTCATT----CCAGGAATGTCTGAATCTGAACAGGCTCTTAAAGGTACTTCTCAGATTAAATTACTCTCATCTGAAGATATAGAAGGGATGCGACTTGTATGTAGGGTAAGA-----GTGATTTTTTCTCCA chr4 + 94230402 61527234 61527233 61527367 61527234 61527233 61527367 134 TTTTCATTTCCCCCAGGAATGTCTGAATCAGAGCAGGCTTTAAAAGGAACCTCTCAAATAAAAATCCTCTCACCTGAGGATATAGAAGGGATGCGAGTAGTGTGTAGGGTAAGGCGGTCTTGATTTTTATTACA ........----.................x..:......:.x.....x..:.....:..x...x.x......:....:..................x.x..:...........:-----x........x:.x.. 8M4I102M5I15M 105/125 84.0% 134/94230402 0.0% 9/125 7.2% 37512128 NA +7358 chr4 + 190214555 99040993 99040992 99041150 158 ATTTCTGTTTCTGTGTCTTTTTTAATGTATTGAGTGTTCCTTTTTTACAGCTTGCTAGAGAAGTTTTGGATGTTGCTGCCGGCATGATTAAACCAGGTGTAACTACTGAAGAAATAGATCACGCTGTACACTTAGTAAGAACTTCACTTTTTTACTTT chr4 + 94230402 61528181 61528180 61528324 61528181 61528180 61528324 144 ATTTATAAGTCAGTGTTTTTTTTG-----------TTTCCTCATTTTCAGCTTGCTAGAGAAGTATTGGATGTTGCTGCCATGATGGTGAAAGCGGGTGTAACTACTGAAGAAATTGATCATGCTGTCCATTTAGTAAGG---TTATTTTATTGTTTT ....x.:xx..x....:......:-----------x.....:x...x.................x...............:xx...:.x...x.:....................x.....:.....x..:........:---.:.:...x..::... 24M11D105M3D15M 115/144 79.9% 144/94230402 0.0% 14/144 9.7% 37512812 NA +11624 chr4 + 190214555 99043204 99043203 99043410 207 GATTTTTTCTTTTATA--------TATTCCAAATTATTTTTTCTGTATTATAGGCATGTATTGCAAGAAATTGCTACCCTTCTCCCCTGAATTATTATAATTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATTTGCCATGGAATACCAGACAGAAGGCCCTTACAAGAAGGTGACATTGTTAATGGTAAGAAAAATATGTTACTTTCA chr4 + 94230402 61529140 61529139 61529348 61529140 61529139 61529348 209 GATCTTATCTTCTACAGTATGTGCTAATGCAGAGTATATTTTCTCAATTA--GGCTTGTATTGCAAGGAATTGCTATCCTTCTCCTCTGAATTATTATAACTTCCCTAAGTCGTGTTGTACATCAGTGAATGAAGTGATCTGTCATGGAATTCCTGACAGGAGGCCATTACAGGAGGGAGATATTGTTAATGGTAAGGGAATTA----ACTTTCA ...:..x....:..:.--------..x.x..:.x...x......xx....--...x...........:........:........:..............:.....x.....x........x..............x..:..:........x..x.....:.....x.....:..:..x..:...............::..x..----....... 16M8I26M2D152M4D7M 168/201 83.6% 209/94230402 0.0% 14/201 7.0% 37514064 NA +10109 chr4 + 190214555 99045167 99045166 99045325 159 ATTCTCTTGCAGTGGATATCACTCTTTATCGCAATGGTTATCATGGGGACCTGAATGAGACATTTTTTGTTGGAGAAGTGGATGATGGAGCACGGAAACTTGTTCAGACCACATATGAGTGCCTGATGCAAGCCATTGATGCAGGTCAGCCTCAGTGTT chr4 + 94230402 61530214 61530213 61530371 61530214 61530213 61530371 158 ATTCT-TTGCAGTGGATATTACTGTCTATCGTAATGGCTACCATGGAGATCTGAATGAGACATTTTATGTTGGAGAAGTTGATGAGGGTGCAAAGAGGCTTGTCCAAACGACGTATGAGTGCCTAATGCAAGCCATTGATGCAGGTAAATCCTCATGCT .....-.............:...x.:.....:.....:..:.....:..:................x............x.....x..x...x:..::.....:..:..x..:...........:.....................x.::.::x:..:. 5M1D153M 129/158 81.6% 158/94230402 0.0% 1/158 0.6% 37514953 NA +11855 chr4 + 190214555 99048709 99048708 99048885 177 ATGAATTTTCTTTTTTC----CTTTCAGTGAAGCCTGGTGTTCGGTACAGAGAATTGGGAAACATTATCCAGAAGCATGCCCAAGCAAATGGGTTTTCAGTTGTTCGAAGCTATTGTGGGCATGGAATCCACAAGCTTTTTCATACAGCTCCCAATGTACCCCACTATGCTAGTAAGTACT chr4 + 94230402 61531280 61531279 61531460 61531280 61531279 61531460 181 ATAAATTTGTATCTTTTAAATTTTGCAGTAAAACCTGGTGTTCGGTATAGAGAACTAGGAAACATTATTCAGAAACATGCTCAAGCAAATGGATTCTCGGTTGTTCGAAGCTACTGTGGGCATGGGATCCATAAACTCTTCCATACAGCCCCTAATGTGCCACACTATGCCAGTGAGTATT ..:.....x:x.:...:----:..x....:..:..............:......:.:...........:.....:.....:...........:..:..:..............:...........:.....:..:..:..:........:..:.....:..x........:...:....:. 17M4I160M 145/177 81.9% 181/94230402 0.0% 4/177 2.3% 37517429 NA +3325 chr4 + 190214555 99056524 99056523 99056583 60 CCTTAGTTGTTTGTTTTTTGTTTTGTTTTTTGTTTTTTTTGTTTGCTTGTTTGTTTGTTT chr4 + 94230402 35077742 35077741 35077801 35077742 35077741 35077801 60 CTTTGGTTGTTTGTCTTTCGTGTTGTTTTTTGGTTTTTTTTTTTCCTTCTAAATTTATTT .:..:.........:...:..x..........x.......x...x...x.xx:...:... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 63978782 NA +3246 chr4 + 190214555 99056535 99056534 99056597 63 TGTTTTTTGTTTTGTTTTTTGTTTTTTTTGTTTGCTTGTTTGTTTGTTTGTTTTTGAGACGGA chr4 + 94230402 12219054 12219053 12219116 12219054 12219053 12219116 63 TGTGTTTTGTAGGGCTGTTAGTCTTTTCTGGTTTTTTGCTTGTTTGTTTGTTTTTAAGACTGA ...x......xxx.:.x..x..:....:..x..x:...:................:....x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 86837481 NA +6253 chr4 + 190214555 99057738 99057737 99057823 86 TTTCTTTGATTTCAGAAAATAAAGCAGTTGGAGTGATGAAGTCGGGCCATGTATTTACAATTGAGCCAATGATTTGTGAAGGTGAG chr4 + 94230402 61534096 61534095 61534181 61534096 61534095 61534181 86 TTTATTTTATTGCAGAAAACAAGGCGGTTGGAGTCATGAAGCCAGGTCATGTATTTACAATTGAACCAATGATCTGTGAAGGTGAG ...x...x...x.......:..:..:........x......:.:..:.................:........:............ 86M 74/86 86.0% 86/94230402 0.0% 0/86 0.0% 37523642 NA +15216 chr4 + 190214555 99061123 99061122 99061614 492 TGAACTAAGAAATT------GTTTTTGTTTGTTGAAGGCGGATGGCAGGATGAAACCTGGCCAGATGGTTGGACTGCGGTGACAAGAGACGGAAAGCGGTCTGCTCAGTTTGAGCACACCCTCCTGGTCACAGACACTGGCTGTGAAATCCTAACCCGGCGACTTGACAGTGCACGGCCTCACTTCATGTCTCAATTTTAATTTCTCCCAAGATGGCACATCT---CAGTACCTTCTTA---CTGTGCTATGCA-TTTTATTGAGAGTACAGAAAGGAAGAGGAACCTTTTTTTAATCACTTGTTTTGTTT----TGACTATAGATAAGAAAGGACTACAGCATTTGATGTGTGTCCTCAAGAACTTGTCTTGG-GTCTGAAAAAGCTGAGAAGAA--TAAAGGAAACATTGCTCAACTCTT-----CAGCCCCCTCCCCCTGCACACCTGTTTTCT--CATTTGCCCTTTGAGCACTTTTACTTAAACTTG-CTTGTAGTTGCTTTTATCACTGCCGCA chr4 + 94230402 61534358 61534357 61534853 61534358 61534357 61534853 496 TAAATTAGGAATTTTTGCCTGGTTTTACATTTTTTAGGTGGTTGGCAAGATGAAACGTGGCCTGATGGATGGACTGCGGTAACAAGAGATGGAAAGCGATCGGCTCAGTTTGAACACACTCTTCTGGTTACCGATACAGGCTGTGAGATCCTCACCCGGCGTCTGGATAGTATTCGTCCCCATTTCATGTCCCAGTGATAGTCTAGACTGAGCACGTGGATCTGAACGATACTTATTTGTCTCTGTACTATGCATTTTTTTTAAGAGTACAGAATAG-AGAGGAG------TTTCATCATTTGCTTTGTTTTTGCTGATTGTAGATAAGAGAGGAATTCA----------------TTGAAGAACCTGACACAATGTCTGGTGAAGCAGAGAAGAATTTAAAGAATTTTCTGCTTTCCTCCTACCTACAACACTCGTGCTATATTTTTCTTTTTCCTTCCATTATCTCTTTT-GCACCTTTCTTCCAATTAGACCTGCGGATGCTTCTGTTGCTGCCATA .:..:..:...x..------.x....::x.x..xx...:..x.....:........x.....x.....x...........:........:........:..x...........:.....:..:.....:..x..:..x........:.....x........x..x..:...::x..x..:..:........:..:.xx..:.:.xxx.::..xxx.::x....---.::...:.x:..:---....:.......-....x..:...........x:.-......:------...x....:...:.......----...:.:.........:....x.x..----------------:.x......:..x.x:::-.....:x:....x........--.....:.xx:x:....:xx...:.-----..:.x.:.x:x.:x.::x:x:..x...:..--....xx.:....x-....:...x:.:x..:.x.-.:..::.x.....:.:.::.....::. 14M6I203M3I13M3I12M1I22M1D7M6D20M4I25M16D18M1I21M2I24M5I30M2I13M1D19M1I27M 333/468 71.2% 496/94230402 0.0% 52/468 11.1% 37526765 NA +3277 chr4 + 190214555 99069260 99069259 99069342 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTCTAACCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........:.::........x.xx.x...x.:..:x.....:.:..x.xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 23036063 NA +3823 chr4 + 190214555 99072568 99072567 99072728 161 CCTACCTCTTTCCAGAATGCATCAGTTCAAAGGCTTTGTTGATTTCATCAAAAGACAGATTGTGAGTCACAAATTCATCAACTTTTATCTTTTTGGACATATATTCAGACACCAACTTTGGGACACTTTCTACACTCTTCCATCCTAAAAGAAATCACACA chr4 + 94230402 61551074 61551073 61551216 61551074 61551073 61551216 143 CTTGCCCCTCTCTTGCAATCATAAAGTCAAAAGCATCACTGGTTT------ATGACA-----------ACAAGGCAACCAGATCAAATTTCTTTG-CCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAACAAAGCCCGTA .:.:..:..:..:x.x.xx...x.:x.....:..x.:::..:...------.x....-----------....:x:x.:..:x.:xx..:.:....-x......x.....:....:....x.x.....:..:.:.........x...:x..x...x.x.::. 45M6D6M11D27M1D65M 95/143 66.4% 143/94230402 0.0% 18/143 12.6% 37521494 NA +9227 chr4 + 190214555 99072570 99072569 99072738 169 TACCTCTTTCCAGAATGCATCAGTTCAAAGGCTTTGTTGATTTCATCAAAAGACAGATTGTGAGTCACAAATTCATCAACTTTTATCTTTTTGGACATATATTCAGACACCAACTTTGGGACACTTTCTACACTCTTCCATCCTAAAAGAAATCACACATTAATTTATT chr4 + 94230402 61540333 61540332 61540501 61540333 61540332 61540501 169 TACCTCTTTCCTTTATGCAGGAGATCAAAAGCCTCATTAATTTTGTCAAAAGGCAGGGTGTGAGTCACAAACTCATCTACTTTGATCTTTTTGGCCATGTAGTCATTCACCAGCTTTGGTACACTGTCTACGCTCTTCCAGCCTGAAAGACAGCAAGCACATGTTTGTT ...........xxx.....xx..x.....:..:.::..:....::.......:...:x.............:.....x.....x..........x...:..x...xx.....:......x.....x.....:........x...:.....x.x..x:..:xx:...:.. 169M 130/169 76.9% 169/94230402 0.0% 0/169 0.0% 37532237 NA +9151 chr4 + 190214555 99074907 99074906 99075074 168 GAATTACCTCCAAAGGCAGTGCCTTTCCATGTGCGACCTGTTACCAGCTGGAATGGACGAGTGGCAATTTCTTCACCTGAAGCAGCTACTCCAACCACGACGCTGACGCCCCAGCCCTTGTGACATGCCTCAAGTGCTGCTCTCTGCAGGCACAGAGATATGACCAAA chr4 + 94230402 61541152 61541151 61541317 61541152 61541151 61541317 166 GAGTTACCTCCAAAAGCAGTCCCTTTCCATGTCCGACCGGTTACTAGCTGGAACGGCCGCGTTGAGATCTCCTGACCAGCAGCAGCTACTCCAACTATCACACTGACTCCCCAGCCTTTGTGGCAGGCTTCCAAGGCAGCCCTCTTCA--CACACAGACAGGACAAAA ..:...........:.....x...........x.....x.....:........:..x..x..x.x:..:..:.x...x.x...............:.:x..:.....x........:.....:..x..:..x.:x..x..:....x..--....x...:.x...x... 148M2D18M 130/166 78.3% 166/94230402 0.0% 2/166 1.2% 37533755 NA +16256 chr4 + 190214555 99076284 99076283 99076613 330 ATACTCACCATGACCTTCACATTACCAATACATTCAAAGGAATAGTCCACTCCTCCATCGGTCATCTCAATGAGCACTTCCTGGATGGGTTTACTAAAATCCTGAGGGTTAATACATTCAGTGGCTCCAAACTCTTTGGCCCTTGCAAATTTATCTTTATTGATGTCCACACCAATGATCCGGGAAGCACCAGCCACTTTACAGCCCATGATAACTGCCAATCCGACTCCTCCCAGACCAAAGACGGCACAAACAGAGCCAGGCTCCAACTAGGAGTAA---AGAAAGTT--------TATAAAGTACTCATTCTACCA-GAGTCAAGAGAATCACTGGGTT chr4 + 94230402 61541993 61541992 61542331 61541993 61541992 61542331 339 ACACTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTAGGTGAAAAATAGAGAGCCATGAGCAACAGAGAAAATTCATCCTTCCACGAGT---GGGAAATACTGGTTT .:............:::x..:.....:.....:.....x..:.....:..x..x.....:.....:....:x.....:.....x.....:..x::...:..:......:....:..:....::...........:.....::.x...x.xx...::..:..x.....x.::..............x..x..x..::.............:.:.::x....::..:........:.:.........x.....x:::........:....x.....x.x..---...:..::--------:.x.:.:x.:....:..x...-....---.:...x:.....x.. 279M3I8M8I21M1I4M3D15M 244/327 74.6% 339/94230402 0.0% 15/327 4.6% 37534291 NA +13469 chr4 + 190214555 99076285 99076284 99076555 271 TACTCACCATGACCTTCACATTACCAATACATTCAAAGGAATAGTCCACTCCTCCATCGGTCATCTCAATGAGCACTTCCTGGATGGGTTTACTAAAATCCTGAGGGTTAATACATTCAGTGGCTCCAAACTCTTTGGCCCTTGCAAATTTATCTTTATTGATGTCCACACCAATGATCCGGGAAGCACCAGCCACTTTACAGCCCATGATAACTGCCAATCCGACTCCTCCCAGACCAAAGACGGCACAAACAGAGCCAGGCTCCAACTA chr4 + 94230402 61583477 61583476 61583747 61583477 61583476 61583747 271 TGCATACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTGCTTCTACCTA .:.x:......:::.:x.:.:x:..:..:xx:..:.....:........x..::x::.:.....:...:.x........x..:..:..:..x:.:.....:.x......:..:..:..:........x.:...:......:.x.....:..:..:..:.....:..x.::x.......x.....x..x.....::.:..:..........:...x.xx.:x...........x..:..............::::.....x.x:..:.x... 271M 191/271 70.5% 271/94230402 0.0% 0/271 0.0% 37492808 NA +19370 chr4 + 190214555 99076286 99076285 99076921 636 ACTCACCATGACCTTCACATTACCAATACATTCAAAGGAATAGTCCACTCCTCCATCGGTCATCTCAATGAGCACTTCCTGGATGGGTTTACTAAAATCCTGAGGGTTAATACATTCAGTGGCTCCAAACTCTTTGGCCCTTGCAAATTTATCTTTATTGATGTCCACACCAATGATCCGGGAAGCACCAGCCACTTTACAGCCCATGATAACTGCCAATCCGACTCCTCCCAGACCAAAGACGGCACAAACAGAGCCAGGCTCCAACTA--------GGAGTAAAGAAAGTTTATAAAGTACTCATTCTACCAGAGTCAAGAGAATCACTGGGTTTCATACAGATTGGCCAATTTCACTATTCCAGGAAAGTTTCACTGAA---------TTAAATTAGAAGGCAGAAGCAAAAAACCCAAGTCAGTCT-CTTACCTTGGCAGTGTTCACAGCAGCACCATAACCGGTTGAAATGCCACAACCTAGAAGGCAGACTTTATCCAAAGGTGCTAAAGGATCTATTTTAGCAACAGAGATATCAGCCACAACTGTGTATTCAGAAAATGTGCTGGTTCCCATGTAATGCAAAATTGTCTTTCCTTTGCAAGTAAATCTGCTGGTACCATCTGGCATTAATCCTTTCCCTTGAGTGA chr4 + 94230402 61569388 61569387 61569985 61569388 61569387 61569985 598 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCATGACATGGGGCTGGGTTGGTCT-----------------CCTGTGTGAGGAGGAT------GCTTC---------------TATTGCTTTTTTGAGGGTGTGAGAGTGCAGTGGTGTGCTTATTTTTGA------------------CACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGA ..x:....x.::x.:::.:x.x.....:xx.........:........x..x:x.:..........::.......:.x......:..:..x:.:..:...........:..:..:..:........x.x..........:.x.....:..:..:..:.....:..x.::x.......x.....x..x.....::.:..:..........:x..x.xx.:x...........x..:..............::::.....x..:.::.x..:--------..:.:x::.xx:..:.-----------------..x.x..x.:...:..------.:...---------------.x.::..x..::::.::x..xxx.x..x.---------...xx..x..------------------..x...x.xx.-.:x........:.....x........x.....:..x..x.:..x:.....:x.x..x.:.........:....:......x:x..x......:..:..x.x:.x.xxx....x:.....x........x.x...x......x.:.xx.x.x.:..:x::..:xx:..:...........:..:...x....x:::..x.....:.:x::..x:xx..x..... 270M8I16M17D16M6D5M15D29M9I10M18D11M1I223M 397/580 68.4% 598/94230402 0.0% 74/580 12.8% 37506898 NA +19238 chr4 + 190214555 99076286 99076285 99076921 636 ACTCACCATGACCTTCACATTACCAATACATTCAAAGGAATAGTCCACTCCTCCATCGGTCATCTCAATGAGCACTTCCTGGATGGGTTTACTAAAATCCTGAGGGTTAATACATTCAGTGGCTCCAAACTCTTTGGCCCTTGCAAATTTATCTTTATTGATGTCCACACCAATGATCCGGGAAGCACCAGCCACTTTACAGCCCATGATAACTGCCAATCCGACTCCTCCCAGACCAAAGACGGCACAAACAGAGCCAGGCTCCAACTA--------GGAGTAAAGAAAGTTTATAAAGTACTCATTCTACCAGAGTCAAGAGAATCACTGGGTTTCATACAGATTGGCCAATTTCACTATTCCAGGAAAGTTTCACTGAATTAAATTAGAAGGCAGAAGCAAAAAACCCAAGTCAGTCT-CTTACCTTGGCAGTGTTCACAGCAGCACCATAACCGGTTGAAATGCCACAACCTAGAAGGCAGACTTTATCCAAAGGTGCTAAAGGATCTATTTTAGCAACAGAGATATCAGCCACAACTGTGTATTCAGAAAATGTGCTGGTTCCCATGTAATGCAAAATTGTCTTTCCTTTGCAAGTAAATCTGCTGGTACCATCTGGCATTAATCCTTTCCCTTGAGTGA chr4 + 94230402 61556582 61556581 61557179 61556582 61556581 61557179 598 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCATGACATGGGGCTGGGTTGGTCT-----------------CCTGTGTGAGGAGGAT------GCTTC-TATTGCTT------TTTTGAGGGTGTGAGAGTGCTGTGGTGTGCTTATTTTTGA-----------------CACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGA ..x:....x.::x.:::.:x.x.....:xx.........:........x..x:x.:..........::.......:.x......:..:..x:.:..:...........:..:..:..:........x.x..........:.x.....:..:..:..:.....:..x.::x.......x.....x..x.....::.:..:..........:...x.xx.:x...........x..:..............::::.....x..:.::.x..:--------..:.:x::.xx:..:.-----------------..x.x..x.:...:..------.:...-..:x.x..------...::xx:x.x:::..:x.:.x::x..x::.x.x..xx:.-----------------..x...x.xx.-.:x........:.....x........x.....:..x..x..:.x:.....:x.x.:x.x:........:....:......x:x..x......:..:..x.x:.x.xxx....x:.....x........x.x...x......x.:.xx.x.x.:..:x::..:xx:..:...........:..:...x....x:::..x.....:.:x::..x:xx..x..... 270M8I16M17D16M6D5M1D8M6D40M17D11M1I223M 396/589 67.2% 598/94230402 0.0% 56/589 9.5% 37519704 NA +19240 chr4 + 190214555 99076286 99076285 99076921 636 ACTCACCATGACCTTCACATTACCAATACATTCAAAGGAATAGTCCACTCCTCCATCGGTCATCTCAATGAGCACTTCCTGGATGGGTTTACTAAAATCCTGAGGGTTAATACATTCAGTGGCTCCAAACTCTTTGGCCCTTGCAAATTTATCTTTATTGATGTCCACACCAATGATCCGGGAAGCACCAGCCACTTTACAGCCCATGATAACTGCCAATCCGACTCCTCCCAGACCAAAGACGGCACAAACAGAGCCAGGCTCCAACTA--------GGAGTAAAGAAAGTTTATAAAGTACTCATTCTACCAGAGTCAAGAGAATCACTGGGTTTCATACAGATTGGCCAATTTCACTATTCCAGGAAAGTTTCACTGAATTAAATTAGAAGGCAGAAGCAAAAAACCCAAGTCAGTCT-CTTACCTTGGCAGTGTTCACAGCAGCACCATAACCGGTTGAAATGCCACAACCTAGAAGGCAGACTTTATCCAAAGGTGCTAAAGGATCTATTTTAGCAACAGAGATATCAGCCACAACTGTGTATTCAGAAAATGTGCTGGTTCCCATGTAATGCAAAATTGTCTTTCCTTTGCAAGTAAATCTGCTGGTACCATCTGGCATTAATCCTTTCCCTTGAGTGA chr4 + 94230402 61562889 61562888 61563486 61562889 61562888 61563486 598 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGCGTGACATGGGGCTGGGTTGGTCT-----------------CCTGTGTGAGGAGGAT------GCTTC-TATTGCTT------TTTTGAGGGTGTGAGAGTGCTGTGGTGTGCTTATTTTTGA-----------------CACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGA ..x:....x.::x.:::.:x.x.....:xx.........:........x..x:x.:..........::.......:.x......:..:..x:.:..:...........:..:..:...........x.x..........:.x.....:..:..:..:.....:..x.::x.......x.....x..x.....::.:..:..........:...x.xx.:x...........x..:........:.....::::.....x..:.::.x..:--------..:.:x::.xx:..:.-----------------..x.x..x.:...:..------.:...-..:x.x..------...::xx:x.x:::..:x.:.x::x..x::.x.x..xx:.-----------------..x...x.xx.-.:x........:.....x........x.....:..x..x..:.x:.....:x.x.:x.x:........:....:......x:x..x......:..:..x.x:.x.xxx....x:.....x........x.x...x......x.:.xx.x.x.:..:x::..:xx:..:...........:..:...x....x:::..x.....:.:x::..x:xx..x..... 270M8I16M17D16M6D5M1D8M6D40M17D11M1I223M 396/589 67.2% 598/94230402 0.0% 56/589 9.5% 37513397 NA +15650 chr4 + 190214555 99076667 99076666 99076943 277 AGAAGGCAGAAGCAAAAAACCCAAGTCAGTCTCTTACCTTGGCAGTGTTCACAGCAGCACCATAACCGGTTGAAATGCCACAACCTAGAAGGCAGACTTTATCCAAAGGTGCTAAAGGATCTATTTTAGCAACAGAGATATCAGCCACAACTGTGTATTCAGAAAATGTGCTGGTTCCCATGTAATGCAAAATTGTCTTTCCTTTGCAAGTAAATCTGCTGGTACCATCTGGCATTAATCCTTTCCCTTGAGTGACTCTAAAGAAAAAAAAAGGAAA chr4 + 94230402 61542794 61542793 61543061 61542794 61542793 61543061 268 AAAGGCCAGAAGCAA-----CCA---TAGCCT-TTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCCTTTCCCTTGAGTAACTCTTAAGGCAAAGACAGGAAA .:.:.x.........-----...---:..:..-.......:........x........x........x..x..:...........:..x.....x........x.........:x.........:.....x..x........:.....x........:..x..:..x.....:..:......x.:..xx....:xx............:..:......x.x........x.....x.:...............:.....x...:x...:.x...... 15M5D3M3D6M1D244M 220/268 82.1% 268/94230402 0.0% 9/268 3.4% 37533873 NA +10646 chr4 + 190214555 99081332 99081331 99082128 797 TGTGTTTTAAGAAGAACATAAAAAG-ATACTAACCTTATCTTCTGGCAAAGGTTAGTTTTAGGATTTAGACAAAATTTGCATTCTCCACACTGTGGGATGTAAAGTGGGATGACAGTGTCACCTGGAAACAAATGCAAAGACATC---------CTGAATAGGTAGTATCTATTTCT------AAATGAAAACA-TCAGCCCTTGCAAATTCCTGTCAACGGATGTGGCTTTGCAAAGTTAAAAACTTCAAGTCTTAGA-------------------------------------------------ACTTT-----ACCTAGGTAA-----------------CATCATTC------AGATA-------CTGTCTGAC----------CATGCAAAAAGTATGTTTCA-------ATATTTTTATCTAAATGAAACTCTTTA-----AACAATAACTGA-------------AGAACAATGAAGTTATATGCTTCAAAATCCTGCTTCATTGATGCATCTC----TAAAAATTCTTGC---------TTAATATGCCAAAATTGGTTTTGGAAATGTACTTAGAAAAGTTTCACAAAAACAGTAGTCTGCAAAAT----CAGAGAGAAAAAAATATCCAAATATTTGTGCTTCCCAGA-TGAGGAATCAACTTAATCTTGACAATCTACTTAGATGATACCTATTCATAAATAGTGGGTAGTTTTATCAGAAAAACAATTTCCCCATAGGAATAAGCCAAAATTATTAAACAAGTGGTTCAAGTATTCTCCTTACCCGCCTTCAGCTTAGTAACTCCCTCACCAACACTTTCCACAATTCCAGCACCTTCATGTCCCAAGATCACTGGAAAACAACCCTCAGGATCAGCTCCACTCAGGGTATAGGCATCGGTGTGGCAAACCGCAGTGGCAATGATCTATCAGGACAT chr4 + 94230402 61544083 61544082 61544939 61544083 61544082 61544939 857 TGTGTGTCAAGA------CAAAAAGCATACACACCTTATCTTTTGGCACAGATTAGTTTTAGGATTCTTGCAGTACTTGCACTCGCCACACTGGGGGATGTACAGAGGGATCACGGTGTCCCCTAGCAGAAAA-----AAAAATCTGGCTATTACTGAGTCAACCAAGGCTTTTTTAGGAGAAAAGTGAAGGTACTCAACTTTTACAGCTTTTAAGCAAC-----------TGCTCATTTAAAACTTCTGTGTGTTAGAGACTGCTTAGAGTATAGGGTAGCGCTGTTTATGGAGTGCTAGCTAGAACACTTTCTCACACCTGGACAGAAAGCTAATCAGAAGTTTATCATTCCAGAACAAATAGGCACGACTGTAAAACAAAACAACCTCAAGCTAACAGAATGTCTAATGATTAGACATTTT----------AAGCTCTTTAGTTAAAACAACAGGTGATAACTATCATTTGAAAACAAAAAACCT-------------TCTCATTATATTGATCCAACTTCAAGTAAGAAATCTGGCGTCTTCTAATCATTAAACCATGA--------------GCATGTCGAATAATT-------AGCATTATCCCTCACTATTCCTCACAGAGGAAAGAA-ATGCATGCAGGCATACACCCTAAAATAAAACACTATATTAATTATTACAGTAAACC------------------ATGTGACAGTTGATGTTGT-AGTAAAGCAACACTTCCAAGGAAGTAAT---AAAACGTGGAAGATGC----CAGGTATTTTC-TTACCTGGCTTTACTTTTGTTACTCCTTCCCCAACACTTTCTACAATTCCTGCTCCTTCATGACCCAGAATCACAGGGAAACATCCCTCGGGATCAGCACCACTCAGAGTATAGGCATCAGTGTGACAGAGAGCAGTGGCAACTATCTGTAAAGAAAT .....x.:....------:......-....xx..........:.....x..:..............:xx:..:x.:.....:..x........x........x..x.....x..:.....x...:.x.:x...-----.:.x...---------....:.x:::x:x:x..x...:x------..:....:::.-...:.::..:..:x..::x:x....-----------...xx.x......x:.:::x..x.....-------------------------------------------------.....-----....:.::.:-----------------:.......------.:...-------....xx:..----------..x..x..x..x....:.x.-------.:.....----------..:.......-----.....:.:x...-------------.:.....x:..x:.-------------..::::.x:......x..x..:----...:..x...x..---------.:.x..x:...x:.--------------.:.:x.x...x.:..-------.:..x..x:.:x..xx..----..x....:...:..-..x..x::.xx::.:.x:..:.:.-.:.::x.::.xx.....:x.x...:.xx..:------------------.x:.::::.x.::.x..:.-..x...:...:x:::...x:.:.:...x---...x::.x:..x.x.:----..:.....:..-.....:.x...:.x:..x..x.....:..x...........:........x..x........x....::.....x..:.....x.....:........x........:...........:.....:..:.xx..........:x....:.x.:..x.. 12M6D7M1I107M5D7M9I23M6I11M1I25M11D28M49I5M5I10M17I8M6I5M7I9M10I20M7I7M10D10M5I12M13I14M13D22M4I13M9I14M14D15M7D18M4I14M1D24M1I31M18D19M1D28M3D16M4D11M1D158M 483/703 68.7% 857/94230402 0.0% 248/703 35.3% 37537249 NA +3006 chr4 + 190214555 99083608 99083607 99083653 46 AAAAAAAAAAAAAAAAAAAGATAAAAAGACGTTATTTGGTCCTGGT chr4 + 94230402 39186567 39186566 39186612 39186567 39186566 39186612 46 AAAAGAGAAAAAAAAAATAAATGAAAATATGTTATTAGGTCCTGGT ....:.:..........x.:..:....x.:......x......... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 59897041 NA +5570 chr4 + 190214555 99085097 99085096 99085241 145 CCTTAAATGTAT----CATTACCTTGATTCGAACTTCATGAGCCTTTGGGGGTGCCACCTCTATCTCCTCTATGGAGAGAGGCTTTCCAGCCTCCCAAGCAACTGCAGCCTTGCACTTGATAACCTG--AAGTGGGGAA---AAAAGGGAATAA chr4 + 94230402 61587148 61587147 61587301 61587148 61587147 61587301 154 CTTTAAATTTTTTTTCCAATACCTTAATACGAACTTCATGTGCTTTTGGTGGGGCAACTTCCACTTCCTCAAGAGAAAATGGTTTATTCGCTTCCCACAGTACTGCTGCCTTGCATTTAATAACCTGCAAAAAGAGCAAAGGAAAAGGGAGTGA .:......x.x.----..x......:..x...........x..:.....x..x..x..:..:.::.....x.x:..:.:x..:..x::x..:.....x:xx.....x........:..:........--..:x.:.x..---........:.:. 12M4I111M2I10M3I12M 105/145 72.4% 154/94230402 0.0% 9/145 6.2% 37497949 NA +7078 chr4 + 190214555 99085101 99085100 99085221 121 AAATGTATCATTACCTTGATTCGAACTTCATGAGCCTTTGGGGGTGCCACCTCTATCTCCTCTATGGAGAGAGGCTTTCCAGCCTCCCAAGCAACTGCAGCCTTGCACTTGATAACCTGAA chr4 + 94230402 61565374 61565373 61565494 61565374 61565373 61565494 121 AAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGA ......:::x.........:x..x......:.x........:.....x..............x.::.....x.::..x..x..:x....:...........::....::x.........:. 121M 93/121 76.9% 121/94230402 0.0% 0/121 0.0% 37519727 NA +7078 chr4 + 190214555 99085101 99085100 99085221 121 AAATGTATCATTACCTTGATTCGAACTTCATGAGCCTTTGGGGGTGCCACCTCTATCTCCTCTATGGAGAGAGGCTTTCCAGCCTCCCAAGCAACTGCAGCCTTGCACTTGATAACCTGAA chr4 + 94230402 61558886 61558885 61559006 61558886 61558885 61559006 121 AAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGA ......:::x.........:x..x......:.x........:.....x..............x.::.....x.::..x..x..:x....:...........::....::x.........:. 121M 93/121 76.9% 121/94230402 0.0% 0/121 0.0% 37526215 NA +7707 chr4 + 190214555 99085110 99085109 99085250 141 ATTACCTTGATTCGAACTTCATGAGCCTTTGGGGGTGCCACCTCTATCTCCTCTATGGAGAGAGGCTTTCCAGCCTCCCAAGCAACTGCAGCCTTGCACTTGATAACCTGA-----AGTGGGGAAAAAAGGGAATAAGCTGTTTAT chr4 + 94230402 61545498 61545497 61545643 61545498 61545497 61545643 146 ATTACCTTGATGCGAACTTCATGAGCTTTTGGCGGAGCGACTTCCACCTCCTCAATAGAGAGAGGTTTACCTGCCTCCCAGGCAACAGCAGCCTTGCATTTAATAACCTAAAAGACAACAAAATAAAAAGAGAACAGAACATTGAT ...........x..............:.....x..x..x..:..:.:......x..:........:..x..x........:.....x...........:..:.......:.-----.::::::x......:...:.::x::..x.. 111M5I30M 108/141 76.6% 146/94230402 0.0% 5/141 3.5% 37539612 NA +6861 chr4 + 190214555 99085111 99085110 99085221 111 TTACCTTGATTCGAACTTCATGAGCCTTTGGGGGTGCCACCTCTATCTCCTCTATGGAGAGAGGCTTTCCAGCCTCCCAAGCAACTGCAGCCTTGCACTTGATAACCTGAA chr4 + 94230402 61573113 61573112 61573223 61573113 61573112 61573223 111 TTACCTTGACACGCACTTCATGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGA .........:x..x........x........:.....x..............x.::.....x.::..x..x..:x....:...........::....::x.........:. 111M 88/111 79.3% 111/94230402 0.0% 0/111 0.0% 37511998 NA +3968 chr4 + 190214555 99111219 99111218 99111316 98 CTCTCTCTCTCTCTCTCTCTCTGTGTATATTTGTATATATACGTATATATATATACACATATATATGTATATATAT-ACCTATGTATATATACGTATAT chr4 + 94230402 60831531 60831530 60831623 60831531 60831530 60831623 93 CTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACAC------ACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ..x.....x.....................x...:....:..------.:.:::....x.x..x..::..x.....-::..:..:::..:.::...... 42M6D28M1I22M 68/92 73.9% 93/94230402 0.0% 7/92 7.6% 38279688 NA +3356 chr4 + 190214555 99111220 99111219 99111318 99 TCTCTCTCTCTCTCTCTCTCTGTGTATATTTGTATATATACGTATATATATATACACATATATATGTATATATATAC-CTATGTATATATACGTATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTG------TATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x...........x...:------.......::.....:.:.:.::....:x.x..x:..:..x....:-x.x...::::..::..:..... 26M6D45M1I22M 65/93 69.9% 94/94230402 0.0% 7/93 7.5% 38279690 NA +3660 chr4 + 190214555 99111220 99111219 99111308 89 TCTCTCTCTCTCTCTCTCTCTGTGTATATTTGTAT--ATATACGTATATATATATACACATATATATGTATATATATACCTATGTATATAT chr4 + 94230402 60831534 60831533 60831623 60831534 60831533 60831623 90 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-GTCTGTGCGCATGTGTGTATAT .....x.............x...:.....x.....--.:.:...:.:.:x.x..x.:....x......-:.x.:.:::.x.:...:..... 35M2I31M1D22M 65/88 73.9% 90/94230402 0.0% 3/88 3.4% 38279686 NA +3069 chr4 + 190214555 99111221 99111220 99111266 46 CTCTCTCTCTCTCTCTCTCTGTGTATATTTGTATATATACGTATAT chr4 + 94230402 27333490 27333489 27333535 27333490 27333489 27333535 46 CCCTCTCTCTCTCTCTCTCTGTGTATCTCTATACATATACTTTCAT .:........................x.:.:..:......x.x:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 71777731 NA +3455 chr4 + 190214555 99111275 99111274 99111381 107 ACATATATATGTATATATATACCTATGTATATATACGTATATATACATAGGTATATATGTGTATATATACACATGTATATATGTATATATACGTATATATATACATA chr4 + 94230402 21109195 21109194 21109301 21109195 21109194 21109301 107 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.:..:.:...x.x.:.:x:.x...x.....:...x:.:......x::x...:x...::....:..:x..:::x.x.:.:.:...:.:..:.x....::..:..:. 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 78002080 NA +3481 chr4 + 190214555 99111337 99111336 99111413 77 ATATATACACATGTATATATGTATATATACGTATATATATACATAGGTATATATGTATATATATGTATATATATACA chr4 + 94230402 76376858 76376857 76376934 76376858 76376857 76376934 77 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACA ..::....x:x.x..:.....:.x.x....:.:...::.....x..x..:x.:......:......::.....x... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 22734479 NA +3475 chr4 + 190214555 99114030 99114029 99114069 40 CTTTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:...................x................ 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 23865981 NA +3413 chr4 + 190214555 99114032 99114031 99114073 42 TTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::.................x.................. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 23865985 NA +3467 chr4 + 190214555 99114033 99114032 99114071 39 TCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 23865983 NA +3102 chr4 + 190214555 99114034 99114033 99114069 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 86512730 NA +3139 chr4 + 190214555 99114036 99114035 99114075 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 23865987 NA +3316 chr4 + 190214555 99114036 99114035 99114071 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 86512732 NA +3102 chr4 + 190214555 99114038 99114037 99114073 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 86512734 NA +6564 chr4 + 190214555 99126549 99126548 99126738 190 TTGTAAACGTTTTTTA-AATCATTCAGTCATCTATTAGTAATGTACCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTTTGGGATAGAATCTACACTTTTCCAACCTGTAA chr4 + 94230402 61581291 61581290 61581469 61581291 61581290 61581469 179 TCATAAACAACTTTTACAATTAAGCAGT------------ATTTACCTCTTCCCTGTCCTTAGCAGATCAAATCCCTCATTGATTTTAGTGAAAGGAAGTGTGTGGGTTATTAATGGATCCAAAACAAACTTTTTCTTCATGTAATCAGCAACCAGTTTGGGCACGGCGTCTTTACTCTTCCAGCCTGAAA .::.....:x:.....-...:.xx....------------..x.....:..:...xxx:.:.x:..:......x.....:.......:x::.....x..x..:.....:.::.:..x.....:.x::..:..:..x...x.:..:....::.....:..x..x.::.x:...x:...:.....:....x.. 16M1I11M12D151M 121/178 68.0% 179/94230402 0.0% 13/178 7.3% 37545258 NA +4931 chr4 + 190214555 99126577 99126576 99126738 162 ATCTATTAGTAATGTACCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTTTGGGATAGAATCTACACTTTTCCAACCTGTAA chr4 + 94230402 61551062 61551061 61551205 61551062 61551061 61551205 144 ATTTCTTGGTACCTTGCCCCTCTCTTGCAATCATAAAGTCAAAAGCATCACTGGTTT----------------ATGA--CAACAAGGCAACCAGATCAAATTTCTTTGCCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAA ..:.x..:...x:x.:..::.:..:.xx:x....x.:......x..x......:...----------------...:--..x..:x...x......::........xx:.x.........xx.........x.x.:.xxx..:.:...:..........:.. 57M16D4M2D83M 101/144 70.1% 144/94230402 0.0% 18/144 12.5% 37575515 NA +7638 chr4 + 190214555 99126591 99126590 99126738 148 TACCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTTTGGGATAGAATCTACACTTTTCCAACCTGTAA chr4 + 94230402 61540333 61540332 61540480 61540333 61540332 61540480 148 TACCTCTTTCCTTTATGCAGGAGATCAAAAGCCTCATTAATTTTGTCAAAAGGCAGGGTGTGAGTCACAAACTCATCTACTTTGATCTTTTTGGCCATGTAGTCATTCACCAGCTTTGGTACACTGTCTACGCTCTTCCAGCCTGAAA .....:.......x:.x..xx..:.....x......:.:....................:..:.....x.::x....:.xx....x:..:..:x:.x.:......x.x...........x.:.xx:.....:..:.....:....x.. 148M 110/148 74.3% 148/94230402 0.0% 0/148 0.0% 37586258 NA +11822 chr4 + 190214555 99131491 99131490 99131768 278 AAAATAT-ACATACCATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTCAATTCAATGATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGCTCCCAGGGCTTTAGCCTTCACAAACTTCTCACTGTTGATGTCAATACCTATGATTCTGGAAGCTCCTGCTGCTTTACAACCCATTACAGCAGAAAGACCCACACCTCCTAGGCCAAAGACAGCACAAGTCGAACCAGGGGTGACCTGC chr4 + 94230402 61562881 61562880 61563159 61562881 61562880 61563159 279 AAAATATGACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGC .......-........x...x..x.xxx:x..x:::xxx....:..x:x.:.....:..x:xx::.....x:..::...xx..:.x......x..:..x.xx.....::x...:....x...x.............xxx....:.....x:.......x..x:.......:.....:x.x.....x.x...x.....x.....:..:..:.....x...:....:..:..x..x.....x.................:..x..:..x..xx.x...... 7M1I271M 198/278 71.2% 279/94230402 0.0% 1/278 0.4% 37568610 NA +10731 chr4 + 190214555 99131496 99131495 99131758 263 ATACATACCATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTCAATTCAATGATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGCTCCCAGGGCTTTAGCCTTCACAAACTTCTCACTGTTGATGTCAATACCTATGATTCTGGAAGCTCCTGCTGCTTTACAACCCATTACAGCAGAAAGACCCACACCTCCTAGGCCAAAGACAGCACAAGTCGAACCAGG chr4 + 94230402 61541993 61541992 61542255 61541993 61541992 61542255 263 ACACTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGG .:..x:......::.:..:xx::...x::...x....:x.x:x.:..:.....x..x.::....x.....:x.xx..:.....x..x..:..x.xx......:x...::.:.x...x....::.....x.:xx.:..:..:..x:..x.xx.x.:x:....x........:..x.....:.x...x.................:.....x....:..xx..x..x..x.......::........x.....x..x..:..... 263M 180/263 68.4% 263/94230402 0.0% 0/263 0.0% 37589503 NA +3638 chr4 + 190214555 99135289 99135288 99135380 92 CATCGTGGTGCATGCCTGTAATCCCAGCTACTTGGAGGGCTGAA--GTGGGAAGTTCACTTGAGCCCAGGAGGTCAAGGCTGCAGTAAGCAATG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAG--CACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..:x........:.--....:.:...........:.:......:--x..x....--.......:.....:..x.:x:.....:..x.x:::... 14M2D28M2I8M2D38M 66/88 75.0% 90/94230402 0.0% 6/88 6.8% 23102092 NA +9224 chr4 + 190214555 99136430 99136429 99136694 265 CTTCTGTTTTACACAAACTGGTGTTTAACCATTTACCTTGGCATTGTTGATTGCAGCCCCATAGCCAGTTGAAAACCCACATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATTGATATCTGACACCACAGTGTACTGAGAGAATGTACTGGTTCCAAAGAAATGGTAAACTGGTTTTCCTTTGCAGGTAAACCTGCTGGTTTTGTCTTCCATTAGTTGTTGATCACTAGCAGGACTTTTGAGA chr4 + 94230402 61563241 61563240 61563497 61563241 61563240 61563497 257 CTTATTTTTGACAC--------GTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAA ...x.x...x....--------..:.:.x:.::x........:x......:x..............x..x..:..x.....xx...:..x...:...:.x..:.:.xx....x..x.......:.....x..:x..xxx..x.::..x........:.xx.x:..x..:...x.:.x:.:...:..x.::.::x....:........:..:......x....:.....xxx...:..x.x...xxxx::..:::.:..x...::. 14M8D243M 172/257 66.9% 257/94230402 0.0% 8/257 3.1% 37573189 NA +9224 chr4 + 190214555 99136430 99136429 99136694 265 CTTCTGTTTTACACAAACTGGTGTTTAACCATTTACCTTGGCATTGTTGATTGCAGCCCCATAGCCAGTTGAAAACCCACATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATTGATATCTGACACCACAGTGTACTGAGAGAATGTACTGGTTCCAAAGAAATGGTAAACTGGTTTTCCTTTGCAGGTAAACCTGCTGGTTTTGTCTTCCATTAGTTGTTGATCACTAGCAGGACTTTTGAGA chr4 + 94230402 61556934 61556933 61557190 61556934 61556933 61557190 257 CTTATTTTTGACAC--------GTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAA ...x.x...x....--------..:.:.x:.::x........:x......:x..............x..x..:..x.....xx...:..x...:...:.x..:.:.xx....x..x.......:.....x..:x..xxx..x.::..x........:.xx.x:..x..:...x.:.x:.:...:..x.::.::x....:........:..:......x....:.....xxx...:..x.x...xxxx::..:::.:..x...::. 14M8D243M 172/257 66.9% 257/94230402 0.0% 8/257 3.1% 37579496 NA +9318 chr4 + 190214555 99136430 99136429 99136694 265 CTTCTGTTTTACACAAACTGGTGTTTAACCATTTACCTTGGCATTGTTGATTGCAGCCCCATAGCCAGTTGAAAACCCACATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATTGATATCTGACACCACAGTGTACTGAGAGAATGTACTGGTTCCAAAGAAATGGTAAACTGGTTTTCCTTTGCAGGTAAACCTGCTGGTTTTGTCTTCCATTAGTTGTTGATCACTAGCAGGACTTTTGAGA chr4 + 94230402 61569740 61569739 61569996 61569740 61569739 61569996 257 CTTATTTTTGACAC--------GTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAA ...x.x...x....--------..:.:.x:.::x........:x......:x..............x..x.:...x.....xx......::..:...:.x..:.:.xx....x..x.......:.....x..:x..xxx..x.::..x........:.xx.x:..x..:...x.:.x:.:...:..x.::.::x....:........:..:......x....:.....xxx...:..x.x...xxxx::..:::.:..x...::. 14M8D243M 172/257 66.9% 257/94230402 0.0% 8/257 3.1% 37566690 NA +9010 chr4 + 190214555 99136461 99136460 99136693 233 TTTACCTTGGCATTGTTGATTGCAGCCCCATAGCCAGTTGAAAACCCACATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATTGATATCTGACACCACAGTGTACTGAGAGAATGTACTGGTTCCAAAGAAATGGTAAACTGGTTTTCCTTTGCAGGTAAACCTGCTGGTTTTGTCTTCCATTAGTTGTTGATCACTAGCAGGACTTTTGAG chr4 + 94230402 61542817 61542816 61543047 61542817 61542816 61543047 231 TTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCCTT--TCCCTTGAGTAACTCTTAAG ........:...x....:.:x...........:..x..x..:.xx.....x..x.....:..x...:.x..x...xx...xx..xx......:..:..x.xxxx......x.x......x.......xx.....x..:..:..:..x.x...:.......::x.:..............:..:...x.x..x:::..xxx...x...:x..--..x..x.x:x:...:..:.. 211M2D20M 162/231 70.1% 231/94230402 0.0% 2/231 0.9% 37593644 NA +9276 chr4 + 190214555 99136462 99136461 99136667 206 TTACCTTGGCATTGTTGATTGCAGCCCCATAGCCAGTTGAAAACCCACATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATTGATATCTGACACCACAGTGTACTGAGAGAATGTACTGGTTCCAAAGAAATGGTAAACTGGTTTTCCTTTGCAGGTAAACCTGCTGGTTTTGTCTTCCATTAGT chr4 + 94230402 61584413 61584412 61584618 61584413 61584412 61584618 206 TTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCATTAGT ...........x.x.xx.xx:..........:........:..:.....x....x..........:.:..:.:.xxx...x..xx............x:x.x:::.x..xx::..:..x.....:.x..x...x.....x..x....x:.....:.:..:..x...:..:..:...........:x....x:::..xx........ 206M 147/206 71.4% 206/94230402 0.0% 0/206 0.0% 37552049 NA +3697 chr4 + 190214555 99139038 99139037 99139159 122 TACTAACAGTGTAGAGTGCTTACCTGATTTTCCCACACAAATTTGTGAGTGGACTCAGACAAAACTTGCATTTTCTACATAGAGGTGCATAAAGTGGAATTACTTTGTCACCTAGAAAGAAA chr4 + 94230402 61584724 61584723 61584845 61584724 61584723 61584845 122 TACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAA ...x.::.::x...::x:..:..:::x....xx::........xx:xxxx.x:..:.::...:.::....:.:..:...:x.x..x:..x.:........x...x:...x............ 122M 74/122 60.7% 122/94230402 0.0% 0/122 0.0% 37554314 NA +6310 chr4 + 190214555 99141538 99141537 99141694 157 TACCTGGTTTGACGTTGGTCACTCCTGGCCCAATACTTTCCACAATACCTGCAGCCTCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACAGT---GGCATCAGTATGGCACAGAGAGGTAGCAATGATCTACAAGGCAAT chr4 + 94230402 61544783 61544782 61544939 61544783 61544782 61544939 157 TACCTGGCTTTACTTTTGTTACTCCTTCCCCAACACTTTCTACAATTCCTGCTCCTTCATGACCCAGAATCACAGGGAAACAT---CCCTCGGGATCAGCACCACTCAGAGTATAGGCATCAGTGTGACAGAGAGCAGTGGCAACTATCTGTAAAGAAAT .......:..x..x..x..:......xx.....:......:.....x.....xx.:.....:..x.x:.....x......xx.---.....:::x.:..x.:.:x.x.x...---.........:..:..x....x:..:....:x....::..:.x... 83M3D26M3I45M 111/154 72.1% 157/94230402 0.0% 6/154 3.9% 37596755 NA +5095 chr4 + 190214555 99141538 99141537 99141664 127 TACCTGGTTTGACGTTGGTCACTCCTGGCCCAATACTTTCCACAATACCTGCAGCCTCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCA chr4 + 94230402 61563961 61563960 61564087 61563961 61563960 61564087 127 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCA .......:..x...xx..........xx:.....:..:........x..x..xx.:..:.....x.x...x.........x...x.:.xxx...x...xxx..x.x....xxxx....x..:..... 127M 91/127 71.7% 127/94230402 0.0% 0/127 0.0% 37577577 NA +5095 chr4 + 190214555 99141538 99141537 99141664 127 TACCTGGTTTGACGTTGGTCACTCCTGGCCCAATACTTTCCACAATACCTGCAGCCTCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCA chr4 + 94230402 61557644 61557643 61557770 61557644 61557643 61557770 127 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCA .......:..x...xx..........xx:.....:..:........x..x..xx.:..:.....x.x...x.........x...x.:.xxx...x...xxx..x.x....xxxx....x..:..... 127M 91/127 71.7% 127/94230402 0.0% 0/127 0.0% 37583894 NA +7824 chr4 + 190214555 99142670 99142669 99142809 140 TCCACTTACCTGAATGCGAACTTCATGAGCCTTGGGGGGAGCTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATTTAATAACCTGAAAGAGA--GAAAGAAAAGGAAGAGGGA chr4 + 94230402 61545494 61545493 61545635 61545494 61545493 61545635 142 TTTAATTACCTTGATGCGAACTTCATGAGCTTTTGGCGGAGCGACTTCCACCTCCTCAATAGAGAGAGGTTTACCTGCCTCCCAGGCAACAGCAGCCTTGCATTTAATAACCTAAAAGACAACAAAATAAAAAGAGAACAGA .::.x......x:.................:..x..x.....x.....x.....:.....:x.:..:..:..:.....:........:.::..x..:................:.....x.--:...x....:..::.x:.. 121M2I19M 108/140 77.1% 142/94230402 0.0% 2/140 1.4% 37597176 NA +6587 chr4 + 190214555 99142676 99142675 99142810 135 TACCTGAATGCGAACTTCATGAGCCTTGGGGGGAGCTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATTTAATAACCTGAAAGAGAGAAAGAAAAGGAAGAGGGAG chr4 + 94230402 61587167 61587166 61587298 61587167 61587166 61587298 132 TACCTTAATACGAACTTCATGTGCTTTTGGTGGGGCAACTTCCACTTCCTCAAGAGAAAATGGTTTATTCGCTTCCCACAGTACTGCTGCCTTGCATTTAATAACCTGCAA---AAAGAGCAAAGGAAAAGGGAG .....x...:...........x..:..x..x..:..x.....x..:..:....x:x...:x..:..::::........x:xx.:x.....:.................x..---.:.:..x.......:...... 111M3D21M 99/132 75.0% 132/94230402 0.0% 3/132 2.3% 37555509 NA +3089 chr4 + 190214555 99163385 99163384 99163451 67 TGTAGTCCCAGCTACTTGGGAAGCTGAGGTGGAAGGACTGCTCGAGCCCAGGAGTTTGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........::.:......x:xx:x.:.x::..:..:.....:..:..x:..:..:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 23130174 NA +3076 chr4 + 190214555 99198660 99198659 99198714 55 TTTATGTATATATATATATACACGCACACACACACACACACACACATATATATAG chr4 + 94230402 58675392 58675391 58675446 58675392 58675391 58675446 55 TCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAG .:.x.....::............x..:.::::.........x..x......x... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 40523268 NA +6462 chr4 + 190214555 99204920 99204919 99205069 150 TTTACCATTTTCCAGTTTTCATTAATTCAACTGCTTCATTGATTTTATCAAGATTCAGAGTATGAGTAATTAGTGGATCTAGATTCAACTTCTCTGCCATATAATCAGCAACCAGTTTAGGGATGTGCTGTCTGCTCTTCCAGCCTGGAA chr4 + 94230402 61581320 61581319 61581469 61581320 61581319 61581469 150 TTTACCTCTTCCCTGTCCTTAGCAGATCAAATCCCTCATTGATTTTAGTGAAAGGAAGTGTGTGGGTTATTAATGGATCCAAAACAAACTTTTTCTTCATGTAATCAGCAACCAGTTTGGGCACGGCGTCTTTACTCTTCCAGCCTGAAA ......x:..:..x..::.:.x:.:x....x.x.:............x::.:.xxx..x..:..:..x....:......:.:.x:x.....:.::x:...:.................:..x.:.xxx.x.:.:.............:.. 150M 103/150 68.7% 150/94230402 0.0% 0/150 0.0% 37623600 NA +4276 chr4 + 190214555 99207425 99207424 99207590 166 CTTTCCCTGCTTCATCCATACCTCCAAAAACAGAACCCTTCAAAGAACGTCCT----------GAGAAGAACAACTGGCCACTGATTTTGAGTTGAACACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCTGTTAGAA chr4 + 94230402 61568979 61568978 61569140 61568979 61568978 61569140 162 CTTTCTTGGCTTCCT----ACCTCCAACCACAGTCCCTTTACAGGTGCGCCCACTTAGTAGAAGGAAAGGATCAATGGGAACTG--------TCGAAC--CAGCAGGTGGTTCTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTGGTGGAA .....::x.....x.----........xx....xx..:..xx.:.x:..:..x----------.::...:.:x.x...xx....--------.:....--::.....::::x.:.....x.:............:xx.:..x:......:.....x........x::...x.:... 15M4D34M10I21M8D6M2D76M 104/152 68.4% 162/94230402 0.0% 24/152 15.8% 37638446 NA +4612 chr4 + 190214555 99207425 99207424 99207590 166 CTTTCCCTGCTTCATCCATACCTCCAAAAACAGAACCCTTCAAAGAACGTCCT----------GAGAAGAACAACTGGCCACTGATTTTGAGTTGAACACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCTGTTAGAA chr4 + 94230402 61562496 61562495 61562657 61562496 61562495 61562657 162 CTTTCTTGGCTTCCT----ACCTCCAACCACAGTCCCTTTACAGGTGCGCCCACTTAGTAGAAGGAAAGGATCAATGGGAACTG--------TCGAAC--CAGCAGGTGATACTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTGGTGGAA .....::x.....x.----........xx....xx..:..xx.:.x:..:..x----------.::...:.:x.x...xx....--------.:....--::.....::.:..:.....x.:............:xx.:..x:......:.....x........x::...x.:... 15M4D34M10I21M8D6M2D76M 106/152 69.7% 162/94230402 0.0% 24/152 15.8% 37644929 NA +4345 chr4 + 190214555 99207513 99207512 99207590 78 ACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCTGTTAGAA chr4 + 94230402 61556258 61556257 61556335 61556258 61556257 61556335 78 ACCAGCAGGTAATACTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTGGTGGAA ..::.....:..:..:.....x.:............:xx.:..x:......:.....x........x::...x.:... 78M 58/78 74.4% 78/94230402 0.0% 0/78 0.0% 37651255 NA +13750 chr4 + 190214555 99208648 99208647 99208930 283 CACTCCAGAGGATTACATACCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATAAAACTTCTTGAATGGGTTTCTTTAAGTCCTGAGGGTTGAGGCACTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTCCAATGATCCTGGCTGCTCCTGCTGCTTTACAACCCATGACAACAGACAAGCCGACTCCTCCCAGGCCAAACACAGCACAGGTAGAACCTGGAGTCACCT chr4 + 94230402 61569374 61569373 61569656 61569374 61569373 61569656 283 CATTCTAAAATATGACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCT ..:..:.:.:x..x.........::::..::x:x.:........:......x..x....:.::..:xx.:.x.....x..::xx.:x..:.x:..:..:..:.....x................x......:..:..x....x:..:.xx.....xx:...:..x..........:...x.:xx.......x.x..x:.....x.....:..:..:........x.....x.:............x........x..:........:..:..:..xx.:.... 283M 203/283 71.7% 283/94230402 0.0% 0/283 0.0% 37639274 NA +13953 chr4 + 190214555 99208648 99208647 99208930 283 CACTCCAGAGGATTACATACCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATAAAACTTCTTGAATGGGTTTCTTTAAGTCCTGAGGGTTGAGGCACTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTCCAATGATCCTGGCTGCTCCTGCTGCTTTACAACCCATGACAACAGACAAGCCGACTCCTCCCAGGCCAAACACAGCACAGGTAGAACCTGGAGTCACCT chr4 + 94230402 61556568 61556567 61556850 61556568 61556567 61556850 283 CATTCTAAAATATGACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCT ..:..:.:.:x..x.........::::..::x:x.:........:......x..x....:.::..:xx.:.x.....x..::xx.:x..:.x:..:..:..:.....x................x......:..:..x....x:..:.xx.....xx:...:..x..........:...x.:xx.......x.x..x:.....x.....:..:..:..............x.:............x........x..:........:..:..:..xx.:.... 283M 204/283 72.1% 283/94230402 0.0% 0/283 0.0% 37652080 NA +14208 chr4 + 190214555 99208648 99208647 99208930 283 CACTCCAGAGGATTACATACCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATAAAACTTCTTGAATGGGTTTCTTTAAGTCCTGAGGGTTGAGGCACTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTCCAATGATCCTGGCTGCTCCTGCTGCTTTACAACCCATGACAACAGACAAGCCGACTCCTCCCAGGCCAAACACAGCACAGGTAGAACCTGGAGTCACCT chr4 + 94230402 61562875 61562874 61563157 61562875 61562874 61563157 283 CATTCTAAAATATGACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCT ..:..:.:.:x..x.........::::..::x:x.:........:......x..x....:.::..:xx.:.x.....x..::xx.:x..:.x:..:..:..:.....x................x.........:..x....x:..:.xx.....xx:...:..x..........:...x.:xx.......x.x..x:.....x.....:..:..:..............x.:............x........x...........:..:..:..xx.:.... 283M 206/283 72.8% 283/94230402 0.0% 0/283 0.0% 37645773 NA +13019 chr4 + 190214555 99208660 99208659 99208931 272 TTACATACCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATAAAACTTCTTGAATGGGTTTCTTTAAGTCCTGAGGGTTGAGGCACTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTCCAATGATCCTGGCTGCTCCTGCTGCTTTACAACCCATGACAACAGACAAGCCGACTCCTCCCAGGCCAAACACAGCACAGGTAGAACCTGGAGTCACCTA chr4 + 94230402 61583476 61583475 61583747 61583476 61583475 61583747 272 TTGCATACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTGCTTCTACCTA ..:.......x:::x..x.x.:xx..:...:....:...x..x....:.:...xxx::.x.....x...:x:.:x.....x.....:..:.....x..:..:.x........x......:..:..x..:.::....xx.....xx:...:..x..........:...x.:xx.......x.x..x:.....x.....:..:..:..............x.:............x........x..:........:..:....xxx::..... 272M 196/272 72.1% 272/94230402 0.0% 0/272 0.0% 37625184 NA +13037 chr4 + 190214555 99208662 99208661 99208999 338 ACATACCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATAAAACTTCTTGAATGGGTTTCTTTAAGTCCTGAGGGTTGAGGCACTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTCCAATGATCCTGGCTGCTCCTGCTGCTTTACAACCCATGACAACAGACAAGCCGACTCCTCCCAGGCCAAACACAGCACAGGTAGAACCTGGAGTCACCTAAACACATACAGGCAGAAAACTCAGAAAACAAAAAGCAA-AGAGAACATACACCTTTACTCAGTTGGGAA chr4 + 94230402 61541995 61541994 61542321 61541995 61541994 61542321 327 ACTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCT----------AGGTGAAAAA--TAGAGAGCCATGAGCAACAGAGAAAATTCATCCTTCCACGAGTGGGAA ..x:....x:..x:.x.x:..x..:..:xx......xx..x......:....x....x.....x....x:.:x..:..:..x.....:....:x.....:......:.:.x........:...x..x..:....xx..:..xx:.x.xx.x.:......x.::..x.:x..........x..x..................:.....:...::..x..:x..:........:.::.....x..x.....x..:..:..x..xx:.....----------...:::....--:...:.:.x.x:.....-......x..x..:.:..x.x.::x...... 269M10D10M2D17M1I30M 230/326 70.6% 327/94230402 0.0% 13/326 4.0% 37666667 NA +10024 chr4 + 190214555 99210071 99210070 99210335 265 ATGCCCCTCACCTTGGCAGTATTGATTGCAGCACCAAACCCAGTGGAAAAGCCACAGCTAATTAGGCATACTTTCTCTAGAGGAGCGACTGCATCAATCTTGGCAACTGAGATTTCCTTTATCACTGTGTATTCACAGAAGGTGCTGGTATTACCAAAGTGATATATTGATTTTCCCTTGCAGGTAAACCTGCTGGTACCATCAGACATCAGTTGGGT-TTTTGACTGTCTTTTATAGACAAAACAAAAAACAAAACACAAAGTTT chr4 + 94230402 61542811 61542810 61543076 61542811 61542810 61543076 266 ATAGCCTTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCCTTTCCCTTGAGTAACTCTTAAGGCAAAGACAGGAAAGTAGAGTCAGAGTCT ..:x..:.:.....:.....:..:.:x.....x...x.x..x..:..:.x......:.:x.x:.....:.....x..x.:...x..x:.x.x...x.....:..x........x..xx::.:.........:..xx..........:..x::xx::.....:..x..:x::.....:........:..:...x.x..........:...x...:xxx.-::....x.:x..:...x:.xx..:...::...xx.:.xx..:...:. 218M1I47M 178/265 67.2% 266/94230402 0.0% 1/265 0.4% 37667260 NA +13807 chr4 + 190214555 99210077 99210076 99210557 481 CTCACCTTGGCAGTATTGATTGCAGCACCAAACCCAGTGGAAAAGCCACAGCTAATTAGGCATACTTTCTCTAGAGGAGCGACTGCATCAATCTTGGCAACTGAGATTTCCTTTATCACTGTGTATTCACAGAAGGTGCTGGTATTACCAAAGTGATATATTGATTTTCCCTTGCAGGTAAACCTGCTGGTACCATCAGACATCAGTTGGGTTTTT----------GACTGTCTTTTATAGACAAAACAAAAAACAAAACACAAAGTTTATTTTGAATTAGAAAGCTTAGATCTTCTCCAATGAAAGTGAATTAAGTTTTCAAAAAGAAAATATTAGTAA------AAACTTACTTGAATTGTATACAAAAATTGCCCTCAGAATTCAGGCAAGAGGTACATTCTCCACACTGTGGCAGAAAGAGTGTGATAACTTTGTCACCTA-AAAGAGCAAAATCATGTCTTATTA-------ACATATTATTTTTTAAAGTAAAGACATA chr4 + 94230402 61584412 61584411 61584897 61584412 61584411 61584897 486 CTTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCATTAGTCCAGTAGGTGAAGAAGAAAGACTGTTT-----------GAAAGATAACCAGACATA------ATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAA--ATCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAAACAGTAATGATTAAACAAACAGGCACACAAGAAGCATTCAGGTAAAAACATA ..:...........x.xx.xx:....x...x.x.....x..:..x.......:...:..:..x.....:..:........::.x.x...x..:.....x:.x.x::....x.x..::..:.........xx...:..:..x...::.x....:....:x....x...:.....:...........:x............x...:...:x:..xxx.----------......:.-----------:.x.:.x...x.:...:.------..xx::...x...xxxx.:.x..x.xx..x:x.xx:x..:.:....:--x.....x.::::x..:x.....------.....:...::xx..xx..:..x.....:....::.x::.:.:......xx.:..:..............x.x........x:......x:...x....-.....:x.x.:.x...x:.x.x:.-------...:.xx.xx:x..x.:.....:..... 216M10I8M11D18M6D47M2D22M6I99M1I24M7I28M 313/462 67.7% 486/94230402 0.0% 43/462 9.3% 37625665 NA +5682 chr4 + 190214555 99213603 99213602 99213768 166 TACCTGGTTTCACTGTGCTTACTCCTTCTCCAATACTCTCAACGATTCCAGCCCCTTCATGGCCCAAGATGGTGGGATACAAGAGGTCC--AAGTGTTTACTCCCCAACACTTTCATCTCTGTACCACACAGTCCGGTGGCCACAACCTGTATGGAAGGCAAAGGGTA chr4 + 94230402 61570460 61570459 61570624 61570460 61570459 61570624 165 TACCTGGCTTCACAGAGGTCACTCCTTCTCCAATGCTCTCCACTATCCCAGCTCCTTCGTGGCCTGGGATGACTGGGAATTGTAAATCAGGAAATGTGCCATCAAGAACATGGTCA--TCTGTGCGACAGATCCCTGTGGCCACGATCTGT-TAGAGGTGAAAGAGCA .......:.....x.x.x.:..............:.....x..x..:.....:.....:.....:::....::x..:x.:x:x.::..x--..:...x:xx..xxx....:xx...--.....:.x...x.x:..x........:.:....-.:..:.xx....:.:. 89M2I25M2D33M1D16M 112/163 68.7% 165/94230402 0.0% 5/163 3.1% 37643143 NA +5877 chr4 + 190214555 99213603 99213602 99213767 165 TACCTGGTTTCACTGTGCTTACTCCTTCTCCAATACTCTCAACGATTCCAGCCCCTTCATGGCCCAAGATGGTGGGATACAAGAGGTCCAAGTGTTTACTCCCC--AACACTTTCATCTCTGTACCACACAGTCCGGTGGCCACAACCTGTATGGAAGGCAAAGGGT chr4 + 94230402 61563961 61563960 61564124 61563961 61563960 61564124 164 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTG--GCAGATCCCCGTGGCCACCATCTGT-TGGAGTGGAGAGAGT .......:.....x.x.x.:..............:.....x..:..:.....:.....:.....:.:....::x..:x.xxxx.x...x:::x:x....:::.:--....:x.......x...:--:..x.x:..x........x.:....-....:x.x.:..:.. 104M2I18M2D25M1D15M 112/162 69.1% 164/94230402 0.0% 5/162 3.1% 37649642 NA +5877 chr4 + 190214555 99213603 99213602 99213767 165 TACCTGGTTTCACTGTGCTTACTCCTTCTCCAATACTCTCAACGATTCCAGCCCCTTCATGGCCCAAGATGGTGGGATACAAGAGGTCCAAGTGTTTACTCCCC--AACACTTTCATCTCTGTACCACACAGTCCGGTGGCCACAACCTGTATGGAAGGCAAAGGGT chr4 + 94230402 61557644 61557643 61557807 61557644 61557643 61557807 164 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTG--GCAGATCCCCGTGGCCACCATCTGT-TGGAGTGGAGAGAGT .......:.....x.x.x.:..............:.....x..:..:.....:.....:.....:.:....::x..:x.xxxx.x...x:::x:x....:::.:--....:x.......x...:--:..x.x:..x........x.:....-....:x.x.:..:.. 104M2I18M2D25M1D15M 112/162 69.1% 164/94230402 0.0% 5/162 3.1% 37655959 NA +3544 chr4 + 190214555 99214262 99214261 99214334 73 TGCACCTGTAGTCCAAGCTGCTTGGGAGGCTGAAGTGGGAGGATCACTTGAGCCCAGTAGTTCGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.x....:....::.......:x:xx.x.:.x.......:.....x..:.:x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 23181057 NA +7201 chr4 + 190214555 99216136 99216135 99216441 306 TTTTTTTTTTTTTTTTTTTTTTTACCTTTATGCGAACTTCCTTTGCCTTTGGTGGGGCCACTTCTACCTCTTCAATAGAAAATGGTGCACCAGGCTTCCAGAGTATGGCTGCTTTGCATCTGATGACCTGGGAAATAGAATACAGGGGCAGAAAGAGAAGCTCCTTAAGCTTGGGAGTTGGAAGATTGCTATATTAGTGATTATAGAATCATTAAATTGGATTAGTCCAACTTTCCGC---------------ACTGCAGAAAAAAAAAAGAAT---AAATATATGCTGAAGGTAGTCTTTCTGACCCCAATTTAAGTTTTCTT chr4 + 94230402 61587145 61587144 61587451 61587145 61587144 61587451 307 TTCCTTTAAATTTTTTTTCCAATACCTTAATACGAACTTCATGTGCTTTTGGTGGGGCAACTTCCACTTCCTCAAGAGAAAATGGTTTATTCGCTTCCCACAGTACTGCTGCCTTGCATTTAATAACCTGCAAAA-AGAGCAAAGGAAAAGGGAG----------TGACCCTTGCAATGAGAAGGTCACCACACTAA----GACAGATTCTTAACATTTGTACGTGCAGAATTCCTGCTCATATCTGGGGAAAACT--AGGAAAAAAAAATAATCAAAAACCAACACCAAAGTCAGTGTCCGTAAGTCAGTTTTGTGTTTTTTT ..::...xxx........::xx......x..:........x.x...:...........x.....:..:..:....x..........x:.::x.x:.:...x....:x.....:......:.:..:.....x:...-...::.x...::x..::..----------.:.x.:.x.x.:.x:....:.::.:.:.:..:----x.:...x..x.x.x...x.xx::xx.x:.x..:.:..---------------...--..:.........x...---...:xx.::.::...x:...x.::x.:.x:.x:x...:x.....:.. 135M1D19M10D32M4D37M15I3M2D16M3I47M 188/289 65.1% 307/94230402 0.0% 35/289 12.1% 37628991 NA +5217 chr4 + 190214555 99216150 99216149 99216275 126 TTTTTTTTTACCTTTATGCGAACTTCCTTTGCCTTTGGTGGGGCCACTTCTACCTCTTCAATAGAAAATGGTGCACCAGGCTTCCAGAGTATGGCTGCTTTGCATCTGATGACCTGGGA-AATAGAA chr4 + 94230402 61573106 61573105 61573232 61573106 61573105 61573232 127 TTTGACTTTACCTTGACACGCACTTCATGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAA ...xx:........x.::..x.....x.x.........x..x..x..:....:...:....:...:.:..:.x::..x.x:x:....:xx.:x..x...:......x...:......:.-...:... 119M1I7M 88/126 69.8% 127/94230402 0.0% 1/126 0.8% 37643044 NA +5181 chr4 + 190214555 99216155 99216154 99216275 121 TTTTACCTTTATGCGAACTTCCTTTGCCTTTGGTGGGGCCACTTCTACCTCTTCAATAGAAAATGGTGCACCAGGCTTCCAGAGTATGGCTGCTTTGCATCTGATGACCTGGGA-AATAGAA chr4 + 94230402 61565382 61565381 61565503 61565382 61565381 61565503 122 TTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAA .........x.::..x.....x:x.........x..x..x..:....:...:....:...:.:..:.x::..x.x:x:....:xx.:x..x...:......x...:......:.-...:... 114M1I7M 85/121 70.2% 122/94230402 0.0% 1/121 0.8% 37650773 NA +5181 chr4 + 190214555 99216155 99216154 99216275 121 TTTTACCTTTATGCGAACTTCCTTTGCCTTTGGTGGGGCCACTTCTACCTCTTCAATAGAAAATGGTGCACCAGGCTTCCAGAGTATGGCTGCTTTGCATCTGATGACCTGGGA-AATAGAA chr4 + 94230402 61558894 61558893 61559015 61558894 61558893 61559015 122 TTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAA .........x.::..x.....x:x.........x..x..x..:....:...:....:...:.:..:.x::..x.x:x:....:xx.:x..x...:......x...:......:.-...:... 114M1I7M 85/121 70.2% 122/94230402 0.0% 1/121 0.8% 37657261 NA +3195 chr4 + 190214555 99216715 99216714 99216774 60 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:.........::::........x.xx.x...x.:........::.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 23183510 NA +6879 chr4 + 190214555 99279420 99279419 99279574 155 ATCTACCTTTTCCCAGAGTGAAGCAGGTCAAATCCTTCATTTATTTTTTCAAAAGGTAAAACATGGGTTATTAATGCATCCAATGAAAACTTCTTAGCCATAAAATCAGCCACAAGTTTTGGGACACATTCTTTACTTTTAAAGCCTGAAAAGAA chr4 + 94230402 61581319 61581318 61581473 61581319 61581318 61581473 155 ATTTACCTCTTCCCTGTCCTTAGCAGATCAAATCCCTCATTGATTTTAGTGAAAGGAAGTGTGTGGGTTATTAATGGATCCAAAACAAACTTTTTCTTCATGTAATCAGCAACCAGTTTGGGCACGGCGTCTTTACTCTTCCAGCCTGAAAGAAA ..:.....:.....x.xx:xx.....:........:.....x.....xx::.....x.:x:::.............x......x:x......:..xx:...:x.......x..x.....x..x..:xxx........:..xx.........::.. 155M 111/155 71.6% 155/94230402 0.0% 0/155 0.0% 37698101 NA +3086 chr4 + 190214555 99279492 99279491 99279581 90 AATGCATCCAATGAAAACTTCTTAGCCATAAAATCAGCCACAAGTTTTGGGACACATTCTTTACTTTTAAAGCCTGAAAAGAAGATGGTA chr4 + 94230402 61551127 61551126 61551216 61551127 61551126 61551216 90 AAGGCAACCAGATCAAATTTCTTTGCCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAACAAAGCCCGTA ..x...x...:xxx...:.....x......x.:....x:..x..:...x.x....x:..:x....:..xx.:....x..x:...x:x... 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 37728365 NA +16201 chr4 + 190214555 99282339 99282338 99282599 261 TACATACCATGGTGTCAAGCCGACCGATGACTTCAAATGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACCTCCTGGATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCCCCAGCTGCTTTACAGCCCATAATAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTG chr4 + 94230402 61583477 61583476 61583737 61583477 61583476 61583737 261 TGCATACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTG .:...........x....xx..:........:..:..x..:x.:........::x::..........xx.:.....:..x..:..:..:......x.:....x............:..:.....x..:.:...:........x.....:..............:..x.:x........x.x..x:..:........:..:........:.:.:....x........:.....x........x..:........:....... 261M 206/261 78.9% 261/94230402 0.0% 0/261 0.0% 37698862 NA +13549 chr4 + 190214555 99282340 99282339 99282612 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAATGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACCTCCTGGATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCCCCAGCTGCTTTACAGCCCATAATAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61541995 61541994 61542267 61541995 61541994 61542267 273 ACTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTAGGT ..x:......::x:...xx:x......:xx:........:x.:..:.....x..............xx::...........x.....:....::x...........:.:.....:....::..x..x.....:.....:..x...x.xx.:.:......x.....x.:xx.......:.x..x...:..x...................:..:..x:..x..:..:.....:.::.....x..x.....x..:.....x..xx:x....:x.. 273M 199/273 72.9% 273/94230402 0.0% 0/273 0.0% 37740345 NA +15459 chr4 + 190214555 99282340 99282339 99282612 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAATGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACCTCCTGGATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCCCCAGCTGCTTTACAGCCCATAATAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61569388 61569387 61569660 61569388 61569387 61569660 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCAT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.......x......:..:......x....:..............:..:.....x....x............x.....:..............:..x.:x........x.x..x:..:........:..:........:.:x:....x........:.....x........x..:........:.....:..xx.x.....::. 273M 210/273 76.9% 273/94230402 0.0% 0/273 0.0% 37712952 NA +15662 chr4 + 190214555 99282340 99282339 99282612 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAATGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACCTCCTGGATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCCCCAGCTGCTTTACAGCCCATAATAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61556582 61556581 61556854 61556582 61556581 61556854 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCAT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.......x......:..:......x....:..............:..:.....x....x............x.....:..............:..x.:x........x.x..x:..:........:..:........:.:.:....x........:.....x........x..:........:.....:..xx.x.....::. 273M 211/273 77.3% 273/94230402 0.0% 0/273 0.0% 37725758 NA +16048 chr4 + 190214555 99282340 99282339 99282612 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAATGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACCTCCTGGATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCCCCAGCTGCTTTACAGCCCATAATAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61562889 61562888 61563161 61562889 61562888 61563161 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGCGT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.......x......:..:......x....:..............:........x....x............x.....:..............:..x.:x........x.x..x:..:........:..:........:.:.:....x........:.....x........x...........:.....:..xx.x.....:.. 273M 214/273 78.4% 273/94230402 0.0% 0/273 0.0% 37719451 NA +11326 chr4 + 190214555 99284364 99284363 99284826 463 GTGTAACTGTTTTTATCACCCATTGCCATTCTTACCTTGGCAACATTGACTGCAGACCCATAACCAGTTGAAAATCCACAGCCAATGAGACAGACTTTCTCTAGAGGCGAGGCTGCATCAATTTTGGCTACTGCATTTTCATCCACCACTGTGTACTGTGAGAAGGTGCTGATGCCAAGGAAGTGGTGGATGGGCTTCCTCCTGCAGGTGAACCTGCTGGTGCCATCCTGCAG----------GGTCCCCTGAGGAT------------TGCTTACACTGGACAGTGCAATACAAAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAA--TGTCTGCGCAGGGAGAGCATCAGAAACCTACTCGTT----TTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAATAGCGAGTGGGATGACTTTATCACCTGGAGAGGGATAAAACAAATTC chr4 + 94230402 61556929 61556928 61557390 61556929 61556928 61557390 462 GTGTGCTTATTTTTG--ACACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTG-----TGCATTATATA---------ATGTACATGTCAGAATTGT--------TGCCAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAACTGCATTCTCCACACTGAGGAAGTCCAAAGAGGATGACTTTGTCTCCTGGA-----ACAAAGCAGATCC ....:x:.:.....:--..x.:.:xxx..x.:x........::::.....x....x......:..x..x..:..x......x...xx.x.........x..:.....:.x:..x.....x..:.....:.xx.::.x:...xx:..x..x.....:.x:.x:..:......x.x.x:........x.....xx.:....:::....:.........x....x:::..xx...x----------...:.xx.....x.------------...x.::::..-----....x..:.x.---------.x.:.::x.x...:.:::.--------...x.::.:.:--...:..x.:.:..:.:xx:x:::..:.xx....::.----.....:..........xxx..x..:..:xx:..:.xx.......:..............xxx.:.:x:..........:..x......-----.:...:..:..:. 15M2D216M10I14M12I11M5D11M9D19M8D11M2I36M4I88M5D13M 287/434 66.1% 462/94230402 0.0% 57/434 13.1% 37727435 NA +11282 chr4 + 190214555 99284364 99284363 99284826 463 GTGTAACTGTTTTTATCACCCATTGCCATTCTTACCTTGGCAACATTGACTGCAGACCCATAACCAGTTGAAAATCCACAGCCAATGAGACAGACTTTCTCTAGAGGCGAGGCTGCATCAATTTTGGCTACTGCATTTTCATCCACCACTGTGTACTGTGAGAAGGTGCTGATGCCAAGGAAGTGGTGGATGGGCTTCCTCCTGCAGGTGAACCTGCTGGTGCCATCCTGCAG----------GGTCCCCTGAGGAT------------TGCTTACACTGGACAGTGCAATACA-AAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAA--TGTCTGCGCAGGGAGAGCATCAGAAACCTACTCGTT----TTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAATAGCGAGTGGGATGACTTTATCACCTGGAGAGGGATAAAACAAATTC chr4 + 94230402 61563236 61563235 61563707 61563236 61563235 61563707 472 GTGTGCTTATTTTTG--ACACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTG-----TGCATTATATAAGTTACATGTTTGTGCATGTCAGAATTGT--------TGACAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCTGGA-----ACAAAGCAGATCC ....:x:.:.....:--..x.:.:xxx..x.:x........::::.....x....x......:..x..x..:..x......x...xx.x.........x..:.....:.x:..x.....x..:.....:.xx.::.x:...xx:..x..x.....:.x:.x:..:......x.x.x:........x.....xx.:....:::....:.........x....x:::..xx...x----------...:.xx.....x.------------...x.::::..-----....x..:.-...x:...::xxx.::::x.x...:.:::.--------..xx.::.:.:--...:..x.:.:..:.:xx:x:::..:.xx....::.----.....:..........xxx..x..:..:xx:..:.xx.......:..............xx.x:.:x:..........:..x......-----.:...:..:..:. 15M2D216M10I14M12I11M5D9M1I30M8D11M2I36M4I88M5D13M 289/443 65.2% 472/94230402 0.0% 49/443 11.1% 37721128 NA +11538 chr4 + 190214555 99284364 99284363 99284826 463 GTGTAACTGTTTTTATCACCCATTGCCATTCTTACCTTGGCAACATTGACTGCAGACCCATAACCAGTTGAAAATCCACAGCCAATGAGACAGACTTTCTCTAGAGGCGAGGCTGCATCAATTTTGGCTACTGCATTTTCATCCACCACTGTGTACTGTGAGAAGGTGCTGATGCCAAGGAAGTGGTGGATGGGCTTCCTCCTGCAGGTGAACCTGCTGGTGCCATCCTGCAG----------GGTCCCCTGAGGAT------------TGCTTACACTGGACAGTGCAATACA-AAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAA--TGTCTGCGCA---------GGGAGAGCATCAGAAACCTACTCGTTTTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAATAGCGAGTGGGATGACTTTATCACCTGGAGAGGGATAAAACAAATTC chr4 + 94230402 61569735 61569734 61570206 61569735 61569734 61570206 472 GTGTGCTTATTTTTG--ACACGTCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTG-----TGCATTATATAAGTTACATGTTTGTGCATGTCAGAACTGT--------TGCCAGTTTAGCGTGTTTGGGTAAAGGGGTAGGTGAAAGCA-----AACGCACTGTGTTTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCTGGA-----ACAAAGCAGATCC ....:x:.:.....:--..x.:.:xxx..x.:x........::::.....x....x......:..x..x.:...x......x...xx.::........x..:.....:.x:..x.....x..:.....:.xx.::.x:...xx:..x..x.....:.x..x:..:......x.x.x:........x.....xx.:....:::....:.........x....x:::..xx...x----------...:.xx.....x.------------...x.::::..-----....x..:.-...x:...::xxx.::::x.x...:..::.--------...x.::.:.:--...:..x.:.---------.x..:....-----...x:...xxx......:..........xxx..x..:..:xx:..:.xx.......:..............xx.x:.:x:..........:..x......-----.:...:..:..:. 15M2D216M10I14M12I11M5D9M1I30M8D11M2I10M9I9M5D100M5D13M 294/438 67.1% 472/94230402 0.0% 59/438 13.5% 37714629 NA +9699 chr4 + 190214555 99284380 99284379 99284616 237 CACCCATTGCCATTCTTACCTTGGCAACATTGACTGCAGACCCATAACCAGTTGAAAATCCACAGCCAATGAGACAGACTTTCTCTAGAGGCGAGGCTGCATCAATTTTGGCTACTGCATTTTCATCCACCACTGTGTACTGTGAGAAGGTGCTGATGCCAAGGAAGTGGTGGATGGGCTTCCTCCTGCAGGTGAACCTGCTGGTGCCATCCTGCAGGG------TCCCCTGAGGATTGCTTA chr4 + 94230402 61542806 61542805 61543045 61542806 61542805 61543045 240 CAACCATAGCC---TTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCCTTTCCCTTGAGTAACTCTTA ..x....x...---:.......:...:::..:..x....x.........x..x..:.xx.....:..x.xx..:..x.....x..x.:...:.xx..x.x...x..:..:.......x:x.x..:x...............x:...........::.x..x.x........::..xx....:.:::..........:...x.x..:.....xx...x.:------....:....x.x:x.... 11M3D205M6I18M 168/234 71.8% 240/94230402 0.0% 9/234 3.8% 37741574 NA +13372 chr4 + 190214555 99284394 99284393 99284903 510 CTTACCTTGGCAACATTGACTGCAGACCCATAACCAGTTGAAAATCCACAGCCAATGAGACAGACTTTCTCTAGAGGCGAGGCTGCATCAATTTTGGCTACTGCATTTTCATCCACCACTGTGTACTGTGAGAAGGTGCTGATGCCAAGGAAGTGGTGGATGGGCTTCCTCCTGCAGGTGAACCTGCTGGTGCCATCCTGCA-GGGTCCCCTGAG-----------GATTGCTTACACTGGACAGTGCAATACAAAGACACACAAAGGC--ATGAGACAGGAC-CATA-----ACTAATGTGCAAACTCAATGTCTGCGCAGGG------AGAGCATCAGAAACCTACTCGTTTTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAATAGCGAGTGGGATGACTTTATCACCTGGAGAGG----------GATAAAACAAATTCTTTTACAATTTCTATCCAGGTATTAATAGAGCAAAAACATAAAGCTCACATGTCTTTAAAACATTAGAAACATGTGT chr4 + 94230402 61584412 61584411 61584931 61584412 61584411 61584931 520 CTTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCATTAGTCCAGTAGGTGAAGAAGAAAGACTGTT------------TGAAAGATAACCAGACATAATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAA-ATCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAAACAGTAATGATTAAACAAACAGGCACACAAGAAGCATTCAGGT-----------AAAAACATAAAA--CAAATACTTTTAATTCCTAAAAAAAATGTGT ............::x.xx.xx:...x...............:..............x.....:.....:..:.....x.x:..x.x...x.........:.x...x....:.x:..:..:.....:.xx.x...:..:..x:.:....x:..:..:..:..x.x:....:.:.:.....:.....:x....:.....xxx..-x:....xx.::.-----------..:..:.------------..x..x.:..xx.x...:..x...--......:xx.x.-...:-----.x.xx....:..::.x..-:..x:xxx....------:x.:.x.x:.....::....:.....x.x...xx.:..:.:..:x.x.:..xx:...:x......:.:.........x....:.:x......:..:...x::..x...:..:..:----------...x.......:xxx:x:....xxxx:..:.....-----------...........:--..x..:::.....xx.x.x.:...x...... 202M1I12M11I7M12D24M2I12M1I4M5I18M1D12M6I115M10I35M11D12M2D31M 330/484 68.2% 520/94230402 0.0% 62/484 12.8% 37699982 NA +6605 chr4 + 190214555 99286825 99286824 99287016 192 TGTTTCCTGAATGTGAATCCTG--TACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGGAAGTGGGGTCACCATG----GTACCACTAACCACGTGGTCATCTGTGCCACAGATTCCTACAGCCACCATCTAC------AGAGTGAAGAGAAGATGTTTATAA chr4 + 94230402 61570436 61570435 61570638 61570436 61570435 61570638 203 TGACTCCTGGCTGCGTGCATTGGTTACCTGGCTTCACAGAGGTCACTCCTTCTCCAATGCTCTCCACTATCCCAGCTCCTTCGTGGCCTGGGATGACTGGGAATTGTA-AATCAGGAAATGTGCCATCAAGAACATGGTCATCTGTGCGACAGATCCCTGTGGCCACGATCTGTTAGAGGTGAAAGAGCAGAGAACGTTTGTAA ..x:.....:x..:.x::x:..--.......:..x..x.x:.....:..........::........x..x..:...x.:..:......:::..x..x..:.:.x.x:-x.:..x.----..:...::..xx..:.............x......:...:::.....x....::------x..:x..:x...::.:....:... 22M2I84M1D7M4I54M6I24M 131/191 68.6% 203/94230402 0.0% 13/191 6.8% 37716389 NA +6149 chr4 + 190214555 99286825 99286824 99287004 180 TGTTTCCTGAATGTGAATCCTG--TACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGG--AAGTGGGGTCACCATGG-TACCACTAACCACGTGGTCATCTGTGCCACAGATTCCTACAGCCACCATCTA-CAGAGTGAAGAGA chr4 + 94230402 61563937 61563936 61564122 61563937 61563936 61564122 186 TGACTCCTGGCTGCGTGCGTTGGTTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGTTGGAGTGGAGAGA ..x:.....:x..:.x::x:..--.......:..x..x.x:.....:..........::........:..x..:...x.:..:.......::..x..x..--..x:x:x....xx.x:.-....x::x.xx..:..x.........:x:.....:..::::..........:-::.....:..... 22M2I76M2I17M1I52M1I13M 123/180 68.3% 186/94230402 0.0% 6/180 3.3% 37722888 NA +6149 chr4 + 190214555 99286825 99286824 99287004 180 TGTTTCCTGAATGTGAATCCTG--TACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGG--AAGTGGGGTCACCATGG-TACCACTAACCACGTGGTCATCTGTGCCACAGATTCCTACAGCCACCATCTA-CAGAGTGAAGAGA chr4 + 94230402 61557620 61557619 61557805 61557620 61557619 61557805 186 TGACTCCTGGCTGCGTGCGTTGGTTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGTTGGAGTGGAGAGA ..x:.....:x..:.x::x:..--.......:..x..x.x:.....:..........::........:..x..:...x.:..:.......::..x..x..--..x:x:x....xx.x:.-....x::x.xx..:..x.........:x:.....:..::::..........:-::.....:..... 22M2I76M2I17M1I52M1I13M 123/180 68.3% 186/94230402 0.0% 6/180 3.3% 37729205 NA +5735 chr4 + 190214555 99287537 99287536 99287685 149 AAATACAAATGGAAAAATGTA-TTTCACCTTAATACGAACTTCATGGGCCTTAGGAGGTGCAACCTCCACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA--GCAAACAGAGAG chr4 + 94230402 61565361 61565360 61565511 61565361 61565360 61565511 151 AAATAAAAA-AGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAAGCGGTGAG .....x...-:.x.......:-...:.....:.:...x......:.x.....x..............:.:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:...:.--.x..:.:.x... 9M1D11M1I116M2I12M 105/148 70.9% 151/94230402 0.0% 4/148 2.7% 37722176 NA +5735 chr4 + 190214555 99287537 99287536 99287685 149 AAATACAAATGGAAAAATGTA-TTTCACCTTAATACGAACTTCATGGGCCTTAGGAGGTGCAACCTCCACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA--GCAAACAGAGAG chr4 + 94230402 61558873 61558872 61559023 61558873 61558872 61559023 151 AAATAAAAA-AGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAAGCGGTGAG .....x...-:.x.......:-...:.....:.:...x......:.x.....x..............:.:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:...:.--.x..:.:.x... 9M1D11M1I116M2I12M 105/148 70.9% 151/94230402 0.0% 4/148 2.7% 37728664 NA +5811 chr4 + 190214555 99287541 99287540 99287685 145 ACAAATGGAAAAA----TGTATTTCACCTTAATACGAACTTCATGGGCCTTAGGAGGTGCAACCTCCACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA--GCAAACAGAGAG chr4 + 94230402 61573090 61573089 61573240 61573090 61573089 61573240 151 ACAAACAGAAAAACCCTTTGACTTTACCTTGACACGCACTTCATGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGAATGGAAGCGGTGAG .....::......----.xx.:..:.....:.:...x........x.....x..............:.:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:...:.--.x..:.:.x... 13M4I120M2I12M 102/145 70.3% 151/94230402 0.0% 6/145 4.1% 37714451 NA +7065 chr4 + 190214555 99287562 99287561 99287768 207 ACCTTAATACGAACTTCATGGGCCTTAGGAGGTGCAACCTCCACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCT---AGAAAAGCAAACAGAGAGATGGCACCAGTGTTCTCCCACGCTTGCAGTCAG---------ATATTGTGTCA----TTTCATCTTTGTACATACAACATCTAATCCCATGTCTGG chr4 + 94230402 61587168 61587167 61587377 61587168 61587167 61587377 210 ACCTTAATACGAACTTCATGTGCTTTTGGTGGGGCAACTTCCACTTCCTCAAGAGAAAATGGTTTATTCGCTTCCCACAGTACTGCTGCCTTGCATTTAATAACCTGCAAAAAGAGCAAAGGAAAAGGGAGTG-------------ACCCTTGCAATGAGAAGGTCACCACACTAAGACAGATTCTTAACATTTGTACGTGCAGAATTCCTGCTCATATCTGG ....................x..:..x..x..x.....:.....:.......x:.....x.....x..::x:.....:..:..x.....:........:..x....---.:..:......x::.:..:x:.::-------------..x......:.x..---------.:.:.:x.x..----:..x.:x.......:.:..:x..::xxx.:...:..... 106M3I24M13D14M9I11M4I39M 139/194 71.6% 210/94230402 0.0% 29/194 14.9% 37700394 NA +6895 chr4 + 190214555 99310759 99310758 99310917 159 ATCTACCTTTTCCCAGAGTGAAGCAGGTCAAATCCTTCATTTATTTTTTCAAAAGGTAAAACATGGGTTATTAACGCATCCAGTGAAAACTTCTTAGCCATAAAATCAGCCACAAGTTTTGGGATACCTTCTTTACTCTTAAAGCCTGAAAAGAAGACA chr4 + 94230402 61581319 61581318 61581477 61581319 61581318 61581477 159 ATTTACCTCTTCCCTGTCCTTAGCAGATCAAATCCCTCATTGATTTTAGTGAAAGGAAGTGTGTGGGTTATTAATGGATCCAAAACAAACTTTTTCTTCATGTAATCAGCAACCAGTTTGGGCACGGCGTCTTTACTCTTCCAGCCTGAAAGAAAACCA ..:.....:.....x.xx:xx.....:........:.....x.....xx::.....x.:x:::...........:.x.....:x:x......:..xx:...:x.......x..x.....x..x.::x.x...........xx.........::..:x.. 159M 112/159 70.4% 159/94230402 0.0% 0/159 0.0% 37729440 NA +3440 chr4 + 190214555 99310831 99310830 99310920 90 AACGCATCCAGTGAAAACTTCTTAGCCATAAAATCAGCCACAAGTTTTGGGATACCTTCTTTACTCTTAAAGCCTGAAAAGAAGACAGTA chr4 + 94230402 61551127 61551126 61551216 61551127 61551126 61551216 90 AAGGCAACCAGATCAAATTTCTTTGCCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAACAAAGCCCGTA ..x...x....xxx...:.....x......x.:....x:..x..:...x.x.:..::..:x.......xx.:....x..x:...x.x... 90M 62/90 68.9% 90/94230402 0.0% 0/90 0.0% 37759704 NA +4088 chr4 + 190214555 99311518 99311517 99311658 141 TACCACCATAAACAGCCCCCTTCCAGGTGCGTCCAGTCAGTAGCAGCATAGGGTTTATTGAGAGGTTCTGGGAAGCAGGAGGTACCCCTACGATGACGCTTGTGCCACATGCCTCATGACAACATAACAGGGAAGCCATCT chr4 + 94230402 61541156 61541155 61541296 61541156 61541155 61541296 141 TACCTCCAAAAGCAGTCCCTTTCCATGTCCGACCGGTTACTAGCTGGAACGGCCGCGTTGAGATCTCCTGACCAGCAGCAGCTACTCCAACTATCACACTGACTCCCCAGCCTTTGTGGCAGGCTTCCAAGGCAGCCCTCT ....x...x..:...:...:.....x..x..x..:..:.x....x.x.xx..x:x::......xx.:...:xx.....x..x...:..x..x..x..:..x::x..x..xx.:.::..:..:xx.xx..:..x....x... 141M 89/141 63.1% 141/94230402 0.0% 0/141 0.0% 37770362 NA +16687 chr4 + 190214555 99313814 99313813 99314074 261 TACATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTG chr4 + 94230402 61583477 61583476 61583737 61583477 61583476 61583737 261 TGCATACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTG .:...........x....xx..:........:..:..x..:x.:........::x::..........xx.:........x.....:..:......x.:....x............:..:.....x..:.:...:........x.....:..............:..x.:x........x.x..x:...........:..:........:...:....x........:.....x........x..:........:....... 261M 210/261 80.5% 261/94230402 0.0% 0/261 0.0% 37730337 NA +13540 chr4 + 190214555 99313815 99313814 99314087 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61541995 61541994 61542267 61541995 61541994 61542267 273 ACTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTAGGT ..x:......::x:...xx:x......:xx:.....:..:x.:..:.....x..............xx::.....:.....x.....:....::x...........:.:.....:....::..x..x.....:.....:..x...x.xx.:.:......x.....x.:xx.......:.x..x......x......................:..x:..x..:..:.....:.::.....x..x.....x..:.....x..xx:x....:x.. 273M 199/273 72.9% 273/94230402 0.0% 0/273 0.0% 37771820 NA +15439 chr4 + 190214555 99313815 99313814 99314087 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61569388 61569387 61569660 61569388 61569387 61569660 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCAT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:..:.....x....x............x.....:..............:..x.:x........x.x..x:...........:..:........:..x:....x........:.....x........x..:........:.....:..xx.x.....::. 273M 210/273 76.9% 273/94230402 0.0% 0/273 0.0% 37744427 NA +15642 chr4 + 190214555 99313815 99313814 99314087 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61556582 61556581 61556854 61556582 61556581 61556854 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTGCAT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:..:.....x....x............x.....:..............:..x.:x........x.x..x:...........:..:........:...:....x........:.....x........x..:........:.....:..xx.x.....::. 273M 211/273 77.3% 273/94230402 0.0% 0/273 0.0% 37757233 NA +16028 chr4 + 190214555 99313815 99313814 99314087 273 ACATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTGGCCTTTGCAAATTTGTCCTTGTTGATGTCCACCGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAGCAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGAGCCTGGGGTGACCTGTGT chr4 + 94230402 61562889 61562888 61563161 61562889 61562888 61563161 273 ACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGCGT ........x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:........x....x............x.....:..............:..x.:x........x.x..x:...........:..:........:...:....x........:.....x........x...........:.....:..xx.x.....:.. 273M 214/273 78.4% 273/94230402 0.0% 0/273 0.0% 37750926 NA +9528 chr4 + 190214555 99315879 99315878 99316100 222 CACCCATTGTCATTCTCACCTTGGCAACGTTAACTGCAGACCCATAACCAGTCGAGAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACCGTGTACTGGGAGAAGGTGCTGGTGCCAAGGAAGTGGTGAATGGGCTTCCCCCTGCAGGTGAACCTCCTGGTGCCATCCTGCA-GGGTCC chr4 + 94230402 61542806 61542805 61543025 61542806 61542805 61543025 220 CAACCATAGCCTTT---ACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCC ..x....x.:.x..---.....:...::......x....x.........x..x....xx.....:..x.xx.....x.....x..x.::..:.xx..x.x...x..:..:..:....x:x.x..:x.......:.......xx...........:..x..x.x........:...xx....:..::..........:..xx.x..:.....xx...-.:.... 14M3D199M1I6M 161/219 73.5% 220/94230402 0.0% 4/219 1.8% 37773073 NA +10760 chr4 + 190214555 99315890 99315889 99316325 436 ATTCTCACCTTGGCAACGTTAACTGCAGACCCATAACCAGTCGAGAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACCGTGTACTGGGAGAAGGTGCTGGTGCCAAGGAAGTGGTGAATGGGCTTCCCCCTGCAGGTGAACCTCCTGGTGCCATCCTGCAG----------GGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACACAGACACACAAAGGCATGAGACAGGAGCATAAGTAATGTGCAAACTCAAAGT--CTGTGCAAAGAGAGCATCAGAAACCTACTCATT----TTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAACTCTGCATTTTCCACACTGAGGAG---TAAAGAGCGGGATGACTTTATCACCTGGAGAGGAATAAAACAAGTTC chr4 + 94230402 61556954 61556953 61557390 61556954 61556953 61557390 437 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATA---------ATGTACATGTCAGAATTGT--------TGCCAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAACTGCATTCTCCACACTGAGGAAGTCCAAAGA---GGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x.:x........:::...:..x....x......:..x..x.....x......x...xx.x:........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x.x.x:........x..:..xx.:.....::....:........xx....x:::..xx...x----------...:.xx:....--:...xxx:..:-----..x.:x.....x..:.:.---------.x.:.::x.x...:.x::.--------...x.::.:.:x..--:..x.:..:.:.:xx:x:::..:.xx.....:.----.....:..........xxx..x..:..:xx:..:.xx.......:.............:---:.....---..........:..x...-----....:...:..::.:. 206M10I12M2I11M5I18M9D19M8D14M2I33M4I59M3I6M3D17M5D16M 276/411 67.2% 437/94230402 0.0% 51/411 12.4% 37758936 NA +10788 chr4 + 190214555 99315890 99315889 99316325 436 ATTCTCACCTTGGCAACGTTAACTGCAGACCCATAACCAGTCGAGAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACCGTGTACTGGGAGAAGGTGCTGGTGCCAAGGAAGTGGTGAATGGGCTTCCCCCTGCAGGTGAACCTCCTGGTGCCATCCTGCAG----------GGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACACAG---ACACACAAAGGCATGAGACAGGAGCATAAGTAATGTGCAAACTCAAA---GTCTGTGCAAAGAGAGCATCAGAAACCTACTCATT----TTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAACTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGGAGAGGAATAAAACAAGTTC chr4 + 94230402 61563261 61563260 61563707 61563261 61563260 61563707 447 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAAGTTACATGTTTGTGCATG-----------TCAGAATTGTTGACAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x.:x........:::...:..x....x......:..x..x.....x......x...xx.x:........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x.x.x:........x..:..xx.:.....::....:........xx....x:::..xx...x----------...:.xx:....--:...xxx:..:-----..x.:x.....x..:.:.:---...:::xx:x.....-----------.x..x.x...xx.x.x.:x.:---..:..x.:..:.:.:xx:x:::..:.xx.....:.----.....:..........xxx..x..:..:xx:..:.xx.......:.............:xx:::.:x:..........:..x...-----....:...:..::.:. 206M10I12M2I11M5I19M3I15M11D21M3I35M4I85M5D16M 276/420 65.7% 447/94230402 0.0% 43/420 10.2% 37752629 NA +10735 chr4 + 190214555 99315890 99315889 99316325 436 ATTCTCACCTTGGCAACGTTAACTGCAGACCCATAACCAGTCGAGAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACCGTGTACTGGGAGAAGGTGCTGGTGCCAAGGAAGTGGTGAATGGGCTTCCCCCTGCAGGTGAACCTCCTGGTGCCATCCTGCA----------GGGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACAC-AGACACACAAAGGCATGAGACAGGAGCATAAGTAATGTGCAAACTCAAA--GTCTGTGCAAAGAGAGCATCAGAAACCTACTCAT----TTTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAACTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGGAGAGGAATAAAACAAGTTC chr4 + 94230402 61569760 61569759 61570206 61569760 61569759 61570206 447 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAAGTTACATGTTTGTGCATGTCAGAACTGT--------TGCCAGTTTAGCGTGTTTGGGTAAAGGGGTAGGTGAAAGCAAACGCACTGTGTTTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x.:x........:::...:..x....x......:..x..x.::..x......x...xx.:.........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x.x.x:........x..:..xx.:.....::....:........xx....x:::..xx...----------x...:.xx:....--:...xxx:..:-----..x.:x.....x..:.:-..x:...::xxx.::::x.x...:.x::.--------...x.::.:.:x--..:..x.:....:.:xx:x:::..:.xx..x..:----......:..........xxx..x..:..:xx:..:.xx.......:.............:xx:::.:x:..........:..x...-----....:...:..::.:. 205M10I13M2I11M5I17M1I29M8D12M2I34M4I86M5D16M 273/423 64.5% 447/94230402 0.0% 37/423 8.7% 37746130 NA +13116 chr4 + 190214555 99315893 99315892 99316313 421 CTCACCTTGGCAACGTTAACTGCAGACCCATAACCAGTCGAGAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACCGTGTACTGGGAGAAGGTGCTGGTGCCAAGGAAGTGGTGAATGGGCTTCCCCCTGCAGGTGAACCTCCTGGTGCCATCCTGCAGGGTCCCCCGAGGATTGCCTAGACTGGGCAGTGCAATACACAGAC------------------ACACAAAGGC--ATGAGA-CAGGAGCATA-----AGTAATGTG-----CAAACTCAAAGTCTGTGCAAAGAGAGCATCAGAAACCTACTCATTTTTCAAGCAGTAGTTGCTCTCCGGGTTTTTACAAACTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGGAGAGGAA chr4 + 94230402 61584412 61584411 61584845 61584412 61584411 61584845 434 CTTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCA------------------TTAGTCCAGTAGGTGAAGAAGAAAGACTGTTTGAAAGATAACCAGACATAATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAAATCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAA ..:.........::x.xx.xx:...x............:.................x..:..:.....:.....:..x.x:..x.x...x........::.x...x.:..:.x:..:........:.x:.x...:..:..x..:....x:..:..:.....x.x:......:.:.....:.....xx....:.....xxx..------------------:...x.::.xx:...x.:x.x.x....------------------...:..x...--......-.x.xx:...:-----...xx....-----:...x.....xxxx.xx:.x.::x.:.x.x:.....::..........x.x...xx.:..:.:..:x.x.:..xx:...:x......:.:.........x...::......:..:..:...x::..x...:..:..:.. 202M18D27M18I10M2I6M1I10M5I9M5I139M 277/403 68.7% 434/94230402 0.0% 49/403 12.2% 37731481 NA +6627 chr4 + 190214555 99318031 99318030 99318202 172 GTGTGAATCCTGTACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGGAAG--GGGGGTCACCAGGT-TGCCACTAACCACGTGGTCATCTGTGTGACAGATTCCTACAGCCACCATC---TACAGAATAAAGAGAAG chr4 + 94230402 61570448 61570447 61570625 61570448 61570447 61570625 178 GCGTGCATTGGTTACCTGGCTTCACAGAGGTCACTCCTTCTCCAATGCTCTCCACTATCCCAGCTCCTTCGTGGCCTGGGATGACTGGGAATTGTAAATCAGGAAATGTGCCATCAAGAACATGGTCATCTGTGCGACAGATCCCTGTGGCCACGATCTGTTAGAGGTGAAAGAGCAG .:...x..:xxx.......:..x..x.x:.....:..........::........x..x..:...x.:..:......:::..x..x..:.:--.x:::...xx.::.-.....::..xx..:............:.......:...:::.....x...---..x..:xx......x.. 91M2I14M1I50M3I17M 121/172 70.3% 178/94230402 0.0% 6/172 3.5% 37747583 NA +6274 chr4 + 190214555 99318043 99318042 99318200 158 TACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGGAAGG--GGGGTCA-CCAGGTTGCCACTAACCACGTGGTCATCTGTGTGACAGATTCCTACAGCCACCATCTA-CAGAATAAAGAGA chr4 + 94230402 61563961 61563960 61564122 61563961 61563960 61564122 162 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGTTGGAGTGGAGAGA .......:..x..x.x:.....:..........::........:..x..:...x.:..:.......::..x..x..:.::--x:x....-xx.:...:..x::x.xx..:..x...........:.....:..::::..........:-::..:.::..... 80M2I7M1I58M1I13M 110/158 69.6% 162/94230402 0.0% 4/158 2.5% 37754082 NA +6274 chr4 + 190214555 99318043 99318042 99318200 158 TACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTCTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGGAAGG--GGGGTCA-CCAGGTTGCCACTAACCACGTGGTCATCTGTGTGACAGATTCCTACAGCCACCATCTA-CAGAATAAAGAGA chr4 + 94230402 61557644 61557643 61557805 61557644 61557643 61557805 162 TACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGTTGGAGTGGAGAGA .......:..x..x.x:.....:..........::........:..x..:...x.:..:.......::..x..x..:.::--x:x....-xx.:...:..x::x.xx..:..x...........:.....:..::::..........:-::..:.::..... 80M2I7M1I58M1I13M 110/158 69.6% 162/94230402 0.0% 4/158 2.5% 37760399 NA +5630 chr4 + 190214555 99318748 99318747 99318894 147 AAATGTAAAATGAAATATAAATGGAAAAAT------ATTTCACCTTAATGCGAACTTCATAAGCCTTAGGAGGTGCAACCTCCACATCCTCAATGGAAAAGGGTTTCTTTACCTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA chr4 + 94230402 61573076 61573075 61573226 61573076 61573075 61573226 151 AAACGAACAACGAAACA--AACAGAAAAACCCTTTGACTTTACCTTGACACGCACTTCATGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGA ...:.x.x..:....:.--..::......:------.:..:.....:.::..x.......:x.....x..............:.:x.......::..:.:x.:...x::::.:x....x:xx..x..x...:.....:x...x....:...:. 17M2D11M6I117M 100/145 69.0% 151/94230402 0.0% 8/145 5.5% 37745672 NA +5332 chr4 + 190214555 99318766 99318765 99318894 129 AAATGGAAAAATA--------TTTCACCTTAATGCGAACTTCATAAGCCTTAGGAGGTGCAACCTCCACATCCTCAATGGAAAAGGGTTTCTTTACCTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA chr4 + 94230402 61565361 61565360 61565497 61565361 61565360 61565497 137 AAATAAAAAAGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGA ....::....:..--------...:.....:.::..x......::x.....x..............:.:x.......::..:.:x.:...x::::.:x....x:xx..x..x...:.....:x...x....:...:. 13M8I116M 89/129 69.0% 137/94230402 0.0% 8/129 6.2% 37753405 NA +5332 chr4 + 190214555 99318766 99318765 99318894 129 AAATGGAAAAATA--------TTTCACCTTAATGCGAACTTCATAAGCCTTAGGAGGTGCAACCTCCACATCCTCAATGGAAAAGGGTTTCTTTACCTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAAAA chr4 + 94230402 61558873 61558872 61559009 61558873 61558872 61559009 137 AAATAAAAAAGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAAGA ....::....:..--------...:.....:.::..x......::x.....x..............:.:x.......::..:.:x.:...x::::.:x....x:xx..x..x...:.....:x...x....:...:. 13M8I116M 89/129 69.0% 137/94230402 0.0% 8/129 6.2% 37759893 NA +6563 chr4 + 190214555 99318781 99318780 99318907 127 TCACCTTAATGCGAACTTCATAAGCCTTAGGAGGTGCAACCTCCACATCCTCAATGGAAAAGGGTTTCTTTACCTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAA---AATCAAACAGAGAGA chr4 + 94230402 61545499 61545498 61545628 61545499 61545498 61545628 130 TTACCTTGATGCGAACTTCATGAGCTTTTGGCGGAGCGACTTCCACCTCCTCAATAGAGAGAGGTTTACCTGCCTCCCAGGCAACAGCAGCCTTGCATTTAATAACCTAAAAGACAACAAAATAAAAAGA .:.....:.............:...:..x..x..x..:..:.....x........:..:.::.....x::.:.......x:xx.....x..:........:..x.....:..---..:x...:.:.:... 112M3I15M 95/127 74.8% 130/94230402 0.0% 3/127 2.4% 37773282 NA +7044 chr4 + 190214555 99339559 99339558 99339725 167 AAACAACTT------------AAAATCTACCTCTTTCCAGAGCGAAGCAGGTCAAATCCTTCATTTATTTTTTCAAAAGGTAAAATATTTGTTATTAATGCATCCAGTGAAAACTTCTTAGCCATAAAGTCAGCCACAAGTTTGGGGACAGATTCTTTACTCTTAAAGCCTGAAAAGAA chr4 + 94230402 61581295 61581294 61581473 61581295 61581294 61581473 179 AAACAACTTTTACAATTAAGCAGTATTTACCTCTTCCCTGTCCTTAGCAGATCAAATCCCTCATTGATTTTAGTGAAAGGAAGTGTGTGGGTTATTAATGGATCCAAAACAAACTTTTTCTTCATGTAATCAGCAACCAGTTTGGGCACGGCGTCTTTACTCTTCCAGCCTGAAAGAAA .........------------.:x..:........:..x.xx.xx.....:........:.....x.....xx::.....x.:x:.:.xx..........x.....:x:x......:..xx:...:x.:.....x..x........x..:.xx...........xx.........::.. 9M12I158M 122/167 73.1% 179/94230402 0.0% 12/167 7.2% 37758264 NA +3037 chr4 + 190214555 99339643 99339642 99339726 84 AATGCATCCAGTGAAAACTTCTTAGCCATAAAGTCAGCCACAAGTTTGGGGACAGATTCTTTACTCTTAAAGCCTGAAAAGAAG chr4 + 94230402 61551127 61551126 61551210 61551127 61551126 61551210 84 AAGGCAACCAGATCAAATTTCTTTGCCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAACAAAG ..x...x....xxx...:.....x......x......x:..x..:..xx.x...xx:..:x.......xx.:....x..x:... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 37788516 NA +4358 chr4 + 190214555 99340572 99340571 99340712 141 TACCTCCAAAAATAGCTCCTTTCCACGTGCGTCCAGTCAGTAGCAGCATAGGGTTTATTGAGAGGTTCTGGGAATCAGGAGGTACCCCTACAATGACACTTGTGCCACATGCCTCATGACAACATAACAGGGAAGCCATCT chr4 + 94230402 61541156 61541155 61541296 61541156 61541155 61541296 141 TACCTCCAAAAGCAGTCCCTTTCCATGTCCGACCGGTTACTAGCTGGAACGGCCGCGTTGAGATCTCCTGACCAGCAGCAGCTACTCCAACTATCACACTGACTCCCCAGCCTTTGTGGCAGGCTTCCAAGGCAGCCCTCT ...........::..::........:..x..x..:..:.x....x.x.xx..x:x::......xx.:...:xx.x...x..x...:..x..x..x.....x::x..x..xx.:.::..:..:xx.xx..:..x....x... 141M 90/141 63.8% 141/94230402 0.0% 0/141 0.0% 37799416 NA +15079 chr4 + 190214555 99342790 99342789 99343057 268 CATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTAGCCTTTGCAAATTTGTCCTTGTTGATGTCCACAGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAACAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGACCCTGGGGTGACCT chr4 + 94230402 61569389 61569388 61569656 61569389 61569388 61569656 268 CATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCT .......x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:..:.....x....x......:.....x.....:..............:..x.::........x.x..x:...........:..:........:..x.....x........:.....x........x..:........:..x..:..xx.x.... 268M 206/268 76.9% 268/94230402 0.0% 0/268 0.0% 37773401 NA +15282 chr4 + 190214555 99342790 99342789 99343057 268 CATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTAGCCTTTGCAAATTTGTCCTTGTTGATGTCCACAGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAACAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGACCCTGGGGTGACCT chr4 + 94230402 61556583 61556582 61556850 61556583 61556582 61556850 268 CATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCT .......x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:..:.....x....x......:.....x.....:..............:..x.::........x.x..x:...........:..:........:........x........:.....x........x..:........:..x..:..xx.x.... 268M 207/268 77.2% 268/94230402 0.0% 0/268 0.0% 37786207 NA +15666 chr4 + 190214555 99342790 99342789 99343061 272 CATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTAGCCTTTGCAAATTTGTCCTTGTTGATGTCCACAGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAACAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGACCCTGGGGTGACCTATGT chr4 + 94230402 61562890 61562889 61563161 61562890 61562889 61563161 272 CATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGCGT .......x...:..x:xxxxx..:...:.......x..:x.:.....:..x:x.:.:.....:..xx.x.....:.x...:..:..:......x....:..............:........x....x......:.....x.....:..............:..x.::........x.x..x:...........:..:........:........x........:.....x........x...........:..x..:..xx.x....::.. 272M 211/272 77.6% 272/94230402 0.0% 0/272 0.0% 37779900 NA +16582 chr4 + 190214555 99342790 99342789 99343062 273 CATACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTAGCCTTTGCAAATTTGTCCTTGTTGATGTCCACAGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAACAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGACCCTGGGGTGACCTATGTT chr4 + 94230402 61583479 61583478 61583751 61583479 61583478 61583751 273 CATACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTGCTTCTACCTACATT ...........x....xx..:........:..:..x..:x.:........::x::..........xx.:........x.....:..:......x.:....x............:..:.....x..:.:...:..:.....x.....:..............:..x.::........x.x..x:...........:..:........:........x........:.....x........x..:........:..x....xxx:x.....::.. 273M 215/273 78.8% 273/94230402 0.0% 0/273 0.0% 37759311 NA +13232 chr4 + 190214555 99342793 99342792 99343061 269 ACCATGGTGTCAAGCCGACCGATGACTTCAAACGAAAAATCCACACCTCCATCAGTCATTTCCTTTAGCACTTCCTGAATGGGTTTCTTGTAGTCTTGAGGGTTGATGCATTCAGTGGCACCCAACTCTTTAGCCTTTGCAAATTTGTCCTTGTTGATGTCCACAGCAATGATTCTGGCTGCTCCAGCTGCTTTACAGCCCATAACAACAGATAGGCCGACCCCTCCCAGGCCAAACACAGCACAGGTAGACCCTGGGGTGACCTATGT chr4 + 94230402 61541999 61541998 61542267 61541999 61541998 61542267 269 ACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTAGGT ......::x:...xx:x......:xx:.....:..:x.:..:.....x..............xx::.....:.....x.....:....::x...........:.:.....:....::..x..x.....:..:..:..x...x.xx.:.:......x.....x.::x.......:.x..x......x.....................::..x:..x..:..:.....:.::.....x..x.....x..:..x..x..xx:x.....x.. 269M 195/269 72.5% 269/94230402 0.0% 0/269 0.0% 37800794 NA +8880 chr4 + 190214555 99344843 99344842 99345064 222 CATCCATTGTCATTTCTACCTTGGCAACTTTGACTGCAGACCCATAACCAGTCGAAAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACTGTGTACTGGGAGAAGGTGCTGACGCCGACGAAGTGGTGGATGGGCTTCCCGCTGCAGGTGAACCTCCTGGTGCCATCCTGCA-GGGTCC chr4 + 94230402 61542806 61542805 61543025 61542806 61542805 61543025 220 CAACCATAGCC---TTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCC ..x....x.:.---.:......:...::x..:..x....x.........x..x..:.xx.....:..x.xx.....x.....x..x.::..:.xx..x.x...x..:..:..:....x:x.x..:x...............xx...........:::x..x.:........::..xx....:..x:..........:..xx.x..:.....xx...-.:.... 11M3D202M1I6M 156/219 71.2% 220/94230402 0.0% 4/219 1.8% 37802037 NA +10341 chr4 + 190214555 99344854 99344853 99345289 436 ATTTCTACCTTGGCAACTTTGACTGCAGACCCATAACCAGTCGAAAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACTGTGTACTGGGAGAAGGTGCTGACGCCGACGAAGTGGTGGATGGGCTTCCCGCTGCAGGTGAACCTCCTGGTGCCATCCTGCAG----------GGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACAAAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAAAGT--CTGTGCAAAG---------AAAGCATCAGAAACTTACTCATTTTTCAAGCAGTAGTTGCTTTCTGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAG---TAAAGAGCGGGATGACTTTATCACCTGCAGAGGAATAAAACAAATTC chr4 + 94230402 61556954 61556953 61557390 61556954 61556953 61557390 437 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATA---------ATGTACATGTCAGAATTGT--------TGCCAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCA-----AACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAACTGCATTCTCCACACTGAGGAAGTCCAAAGA---GGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x:.x........:::x.....x....x......:..x..x..:..x......x...xx.x:........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x:x.x..x......x.....xx.:.....x:....:........xx....x:::..xx...x----------...:.xx:....--:...xxx:..:-----..x.:x.....x..:.x.---------.x.:.::x.x...:.:::.--------...x.::.:.:x..--:..x.:..:.---------......-----....:...xxxx.....:..........xxx..x..:..:xx:..:.xx.......:.............:---:.....---..........:..x...-----....:...:..:..:. 206M10I12M2I11M5I18M9D19M8D14M2I10M9I6M5D71M3I6M3D17M5D16M 279/406 68.7% 437/94230402 0.0% 61/406 15.0% 37787900 NA +10418 chr4 + 190214555 99344854 99344853 99345289 436 ATTTCTACCTTGGCAACTTTGACTGCAGACCCATAACCAGTCGAAAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACTGTGTACTGGGAGAAGGTGCTGACGCCGACGAAGTGGTGGATGGGCTTCCCGCTGCAGGTGAACCTCCTGGTGCCATCCTGCAG----------GGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACA-AAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAAAGT--CTGTGCAAAG---------AAAGCATCAGAAACTTACTCATTTTTCAAGCAGTAGTTGCTTTCTGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGCAGAGGAATAAAACAAATTC chr4 + 94230402 61563261 61563260 61563707 61563261 61563260 61563707 447 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAAGTTACATGTTTGTGCATGTCAGAATTGT--------TGACAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCA-----AACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x:.x........:::x.....x....x......:..x..x..:..x......x...xx.x:........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x:x.x..x......x.....xx.:.....x:....:........xx....x:::..xx...x----------...:.xx:....--:...xxx:..:-----..x.:x.....x..:.-...x:...::xxx.::::x.x...:.:::.--------..xx.::.:.:x..--:..x.:..:.---------......-----....:...xxxx.....:..........xxx..x..:..:xx:..:.xx.......:.............:xx:::.:x:..........:..x...-----....:...:..:..:. 206M10I12M2I11M5I16M1I30M8D14M2I10M9I6M5D97M5D16M 277/418 66.3% 447/94230402 0.0% 47/418 11.2% 37781593 NA +11139 chr4 + 190214555 99344854 99344853 99345289 436 ATTTCTACCTTGGCAACTTTGACTGCAGACCCATAACCAGTCGAAAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACTGTGTACTGGGAGAAGGTGCTGACGCCGACGAAGTGGTGGATGGGCTTCCCGCTGCAGGTGAACCTCCTGGTGCCATCCTGCA----------GGGTCCCCCGAGG--ATTGCCTAGAC-----TGGGCAGTGCAATACA-AAGACACACAAAGGCATGAGACAGGACCATAACTAATGTGCAAACTCAAA--GTCTGTGCAAA---------GAAAGCATCAGAAACTTACTCATTTTTCAAGCAGTAGTTGCTTTCTGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGCAGAGGAATAAAACAAATTC chr4 + 94230402 61569760 61569759 61570206 61569760 61569759 61570206 447 ATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAAGTTACATGTTTGTGCATGTCAGAACTGT--------TGCCAGTTTAGCGTGTTTGGGTAAAGGGGTAGGTGAAAGC-----AAACGCACTGTGTTTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCT-----GGAACAAAGCAGATCC ..x:.x........:::x.....x....x......:..x..x.:...x......x...xx.:.........x.....:..:.x:..x.....x..:.......xx.::.x....xx:..x..x.....:.xx.x:..:......x:x.x..x......x.....xx.:.....x:....:........xx....x:::..xx...----------x...:.xx:....--:...xxx:..:-----..x.:x.....x..:.-...x:...::xxx.::::x.x...:..::.--------...x.::.:.:x--..:..x.:...---------......-----....x:...xxx......:..........xxx..x..:..:xx:..:.xx.......:.............:xx:::.:x:..........:..x...-----....:...:..:..:. 205M10I13M2I11M5I16M1I30M8D12M2I11M9I6M5D98M5D16M 281/418 67.2% 447/94230402 0.0% 47/418 11.2% 37775094 NA +12191 chr4 + 190214555 99344859 99344858 99345284 426 TACCTTGGCAACTTTGACTGCAGACCCATAACCAGTCGAAAATCCACAGCCAATGAGGCAGACTTTCTCCAGGGGCGAGGCTGCATCAATTTTGGCCACTGCATTCTCATCCACCACTGTGTACTGGGAGAAGGTGCTGACGCCGACGAAGTGGTGGATGGGCTTCCCGCTGCAGGTGAACCTCCTGGTGCCATCCTGCAGGGTCCCCCGAGGATTGCCTAGACTGGGCAGTGCAATACAAAGAC------------------ACACAAAGGC--ATGAGACAGGAC-CATA-----ACTAATGTGCAAACTCAAAGTCTGTGCAAAGAAAG-----------CATCAGAAACTTACTCATTTTTCAAGCAGTAGTTGCTTTCTGGGTTTTTACAAATTCTGCATTTTCCACACTGAGGAGTAAAGAGCGGGATGACTTTATCACCTGCAGAGGAATAAAACA chr4 + 94230402 61584414 61584413 61584848 61584414 61584413 61584848 435 TACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCA------------------TTAGTCCAGTAGGTGAAGAAGAAAGACTGTTTGAAAGATAACCAGACATAATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAAA------TCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCT----AGAAAGAAAACA ..........:::.xx.xx:...x............:..:..............x..:..:.....:.....:..x.x:..x.x...x........::.x...x.:..:.x:..:..:.....:.x:.x...:..:..x:::..:..:..:..:..:..x.x:.....x:.:.....:.....xx....:.....xxx..------------------:...x.::.xx:...x.:x.x......------------------...:..x...--......:xx.x.-...:-----.x.xx....:..::.x...------x....x..:.-----------.x.x:......:..........x.x...xx.:..:.::.:x.x.:..xx:...:x......:.:.........x...::......:..:..:...x::..x...----..:..x...... 200M18D27M18I10M2I12M1I4M5I19M6D10M11I104M4D12M 275/398 69.1% 435/94230402 0.0% 65/398 16.3% 37760445 NA +7038 chr4 + 190214555 99347002 99347001 99347168 167 GTACCTGGTTTGACTGTAGTCACCCCTTCTCCAACACTTTCCACGATGCCGGCTGCCTCATGGCCTAAAATCACAGGAAGGGGGGTCACCAGGTTGCCACTAACCACATGCTCATCTGAACGACAGATTCCTGCAGCCACCATCTA---CAGAATAAAGA-GAAGATGTTT chr4 + 94230402 61586051 61586050 61586221 61586051 61586050 61586221 171 GTACCTGGCTTTAACGAAGTTACTTTCTCCCCAACACTTTCTATGACACCAGCTGCCTCGTGCCCAAGGATTATTGGAAAAGGCATAGCCAGTGCACCAGTCACCACATGGTCATCAGAGCGACAGATCCCCGTGGCTACAATCTGATTTAGAAGAAAGGCGAGAACGTTT ........:..x.x:.x...:..::::..:...........:.:..::..:........:..x..x.::..:.:x....::..x:.x:....xx::...x.x........x.....x..:........:..:.::..:..x....:---:....x....:-..::.:.... 146M3I11M1I10M 115/167 68.9% 171/94230402 0.0% 4/167 2.4% 37760951 NA +5796 chr4 + 190214555 99347719 99347718 99347852 134 AAATACAAATGGAAAAAGTA-TTTCACCTTAATGCGAACTTCATGAGCCTTAGGAGGTGCAACCTCTACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAA chr4 + 94230402 61565361 61565360 61565495 61565361 61565360 61565495 135 AAATAAAAAAGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAA .....x...x.x....x..:-...:.....:.::..x......:.x.....x................:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:... 20M1I114M 95/134 70.9% 135/94230402 0.0% 1/134 0.7% 37782358 NA +5796 chr4 + 190214555 99347719 99347718 99347852 134 AAATACAAATGGAAAAAGTA-TTTCACCTTAATGCGAACTTCATGAGCCTTAGGAGGTGCAACCTCTACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAA chr4 + 94230402 61558873 61558872 61559007 61558873 61558872 61559007 135 AAATAAAAAAGTAAAATGTGCTTTTACCTTGACACGCACTTCACGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAA .....x...x.x....x..:-...:.....:.::..x......:.x.....x................:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:... 20M1I114M 95/134 70.9% 135/94230402 0.0% 1/134 0.7% 37788846 NA +5690 chr4 + 190214555 99347723 99347722 99347852 130 ACAAATGGAAAAAGT-----ATTTCACCTTAATGCGAACTTCATGAGCCTTAGGAGGTGCAACCTCTACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAA chr4 + 94230402 61573090 61573089 61573224 61573090 61573089 61573224 135 ACAAACAGAAAAACCCTTTGACTTTACCTTGACACGCACTTCATGTGCCTTTGGAGGTGCAACCTCTATCTCCTCAACAGAGAGTGATTTGCCCGCTGCCCAGGCAACTGCAGCTCTGCATCGGATAACCTGGAA .....::......x:-----.:..:.....:.::..x........x.....x................:........::..:.:x.:...x::::x:x....x:xx..x..x...:.....:x...x....:... 15M5I115M 92/130 70.8% 135/94230402 0.0% 5/130 3.8% 37774633 NA +6372 chr4 + 190214555 99347741 99347740 99347852 112 TCACCTTAATGCGAACTTCATGAGCCTTAGGAGGTGCAACCTCTACCTCCTCAATGGAAAAGGGTTTCTTTAACTCCCATAGCACAGCTGCTTTGCATTTGATTACCTAGAA chr4 + 94230402 61545499 61545498 61545610 61545499 61545498 61545610 112 TTACCTTGATGCGAACTTCATGAGCTTTTGGCGGAGCGACTTCCACCTCCTCAATAGAGAGAGGTTTACCTGCCTCCCAGGCAACAGCAGCCTTGCATTTAATAACCTAAAA .:.....:.................:..x..x..x..:..:..:...........:..:.::.....x::.:x......x:xx.....x..:........:..x.....:.. 112M 85/112 75.9% 112/94230402 0.0% 0/112 0.0% 37802242 NA +3329 chr4 + 190214555 99351007 99351006 99351080 74 GTGTACCTGTAAACTCAGCTACTTGTGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..x....:x::..........x:........x.xx.x...x...........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 23317803 NA +3621 chr4 + 190214555 99364761 99364760 99364830 70 CATGGTGGTGCATGCCTGTAGTCCCAGCTACTTCAGAGGCTGAGGTAGAGGAATCACTTGAACCCAAGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--......:..........x.:........x:xx:x...x............::.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 23331564 NA +3090 chr4 + 190214555 99406058 99406057 99406143 86 AAAATTATTTTTTAAAAATCGAGTATGGAGAACCTCAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAGAAAAGAAACACTGGTGGAT chr4 + 94230402 34833232 34833231 34833317 34833232 34833231 34833317 86 AAGTTTCTATTTTTAAAATGCAATGTGGAGATGAACAGAAAAGAGAATAGAGAAAATACAAGAAGGGGAAAGAGACGCTAATGAAT ..:x..x.x....x.....xx.:.:......xxxx..:....:.:..x.:.:....x:x.....::.:.....:..:..::..:.. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 64572826 NA +5852 chr4 + 190214555 99415458 99415457 99415627 170 TCATCATAAGAAACAGTTACCTTTGTCCTGAATTGAGCAGCTCAAATCCTTCACTGATTTTTTTAAATGGTAAAACATGAGTTATCAACTGGTCCAGGTCAAATTTCTTTGCCAGGAACTCAGTCACTAGTTTTGGGACATCATCTCTGCTTTTCAAACCTGCAAATAAG chr4 + 94230402 61561856 61561855 61562025 61561856 61561855 61562025 170 TCAGGATCAGAATCTCTCACCTTTTGCCTGCACGTAGCAATTCAAATCCCTCGTTGATTTTAGCAAACGGCAGCGTGTGTGTGATCAGCAAGTCGGAGTTAAATTTCTTCTCCAAATAGCTGGCAACTAATTTGGGGATAGAGTCTCTCATTTTCCAGCCTGGAAATGGG ...xx..x....x.xx.:......xx....x.:xx....::........:..::.......xx:...:..:.:x:::..x..x....:.x:...x::..:.........:x...::x.x:::.:x....:...x....:.xx:.....xx.....x.:....x....::. 170M 109/170 64.1% 170/94230402 0.0% 0/170 0.0% 37853602 NA +5863 chr4 + 190214555 99415458 99415457 99415627 170 TCATCATAAGAAACAGTTACCTTTGTCCTGAATTGAGCAGCTCAAATCCTTCACTGATTTTTTTAAATGGTAAAACATGAGTTATCAACTGGTCCAGGTCAAATTTCTTTGCCAGGAACTCAGTCACTAGTTTTGGGACATCATCTCTGCTTTTCAAACCTGCAAATAAG chr4 + 94230402 61568339 61568338 61568508 61568339 61568338 61568508 170 TCAGAATCAGAATCTCTCACCTTTTGCCTGCACGTAGCAATTCAAATCCCTCGTTGATTTTAGCAAACGGCAGCGTGTGTGTGATCAGCAAGTCGGAGTTAAATTTCTTCTCCAAATAGCTGGCAACTAATTTGGGGATAGAGTCTCTCATTTTCCAGCCTGGAAATGGG ...xx..x....x.xx.:......xx....x.:xx....::........:..::.......xx:...:..:.:x:::..x..x....:.x:...x::..:.........:x...::x.x:::.:x....:...x....:.xx:.....xx.....x.:....x....::. 170M 109/170 64.1% 170/94230402 0.0% 0/170 0.0% 37847119 NA +5863 chr4 + 190214555 99415458 99415457 99415627 170 TCATCATAAGAAACAGTTACCTTTGTCCTGAATTGAGCAGCTCAAATCCTTCACTGATTTTTTTAAATGGTAAAACATGAGTTATCAACTGGTCCAGGTCAAATTTCTTTGCCAGGAACTCAGTCACTAGTTTTGGGACATCATCTCTGCTTTTCAAACCTGCAAATAAG chr4 + 94230402 61555647 61555646 61555816 61555647 61555646 61555816 170 TCAGAATCAGAATCTCTCACCTTTTGCCTGCACGTAGCAATTCAAATCCCTCGTTGATTTTAGCAAACGGCAGCGTGTGTGTGATCAGCAAGTCGGAGTTAAATTTCTTCTCCAAATAGCTGGCAACTAATTTGGGGATAGAGTCTCTCATTTTCCAGCCTGGAAATGGG ...xx..x....x.xx.:......xx....x.:xx....::........:..::.......xx:...:..:.:x:::..x..x....:.x:...x::..:.........:x...::x.x:::.:x....:...x....:.xx:.....xx.....x.:....x....::. 170M 109/170 64.1% 170/94230402 0.0% 0/170 0.0% 37859811 NA +3865 chr4 + 190214555 99415474 99415473 99415633 160 TTACCTTTGTCCTGAATTGAGCAGCTCAAATCCTTCACTGATTTTTTTAAATGGTAAAACATGAGTTATCAACTGGTCCAGGTCAAATTTCTTTGCCAGGAACTCAGTCACTAGTTTTGGGACATCATCTCTGCTTTTCAAACCTGCAAATAAGCACACA chr4 + 94230402 61551075 61551074 61551216 61551075 61551074 61551216 142 TTGCCCCTCTCTTGCAATCATAAAGTCAAAAGCATCACTGGTTT------ATGACAA------------CAAGGCAACCAGATCAAATTTCTTTGCCATATAGTCAGATACCAGCTTTTGTACACTCTCCATACTCTTCCAACCTGCAACAAAGCCCGTA ..:..::.x..:..x.x.x.xx.:x.....xx.x......:...------...::..------------...xxx:x....:................x:x.x....x:..:..:...x.x...::x..:x.:..:...x.........xx....x.::. 44M6D7M12D91M 95/142 66.9% 142/94230402 0.0% 18/142 12.7% 37864399 NA +3855 chr4 + 190214555 99418973 99418972 99419124 152 TTGCTTTCCTGACCTCCAAAGACACATCCCTTCCATGTGCGTCCAGTGAAGAGCAACATCGGGTCATAGGTGAGCATCTTGGCTGATGGAGGAACTCCTACAACCACGCTGGTCCCATAGTTCATGTGGCAGGATGCCAGGGCATCAATCTG chr4 + 94230402 61556179 61556178 61556329 61556179 61556178 61556329 151 TTGGCTTCCT-ACCTCCAGCCAGGGTTCCTTTACAGGTGCGCCCACTTAGTAGAAGGAAAGGATCAATGGGAACTGTCGAACCAGCAGGTAATACTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTG ...x:.....-.......:xx.x:xx...:..x..x.....:...x.x.:x..x.:x.xx..:...xx..x:.x::..xx:x.x.xx..x::x.....x..x.:...:.x.::...:xx......:.x...:..x.........x....... 10M1D141M 95/151 62.9% 151/94230402 0.0% 1/151 0.7% 37862794 NA +4250 chr4 + 190214555 99418973 99418972 99419124 152 TTGCTTTCCTGACCTCCAAAGACACATCCCTTCCATGTGCGTCCAGTGAAGAGCAACATCGGGTCATAGGTGAGCATCTTGGCTGATGGAGGAACTCCTACAACCACGCTGGTCCCATAGTTCATGTGGCAGGATGCCAGGGCATCAATCTG chr4 + 94230402 61568984 61568983 61569134 61568984 61568983 61569134 151 TTGGCTTCCT-ACCTCCAACCACAGTCCCTTTACAGGTGCGCCCACTTAGTAGAAGGAAAGGATCAATGGGAACTGTCGAACCAGCAGGTGGTTCTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTG ...x:.....-........xx...xx:..:..x..x.....:...x.x.:x..x.:x.xx..:...xx..x:.x::..xx:x.x.xx..x..xx....x..x.:...:.x.::...:xx......:.x...:..x.........x....... 10M1D141M 98/151 64.9% 151/94230402 0.0% 1/151 0.7% 37849989 NA +4333 chr4 + 190214555 99418973 99418972 99419124 152 TTGCTTTCCTGACCTCCAAAGACACATCCCTTCCATGTGCGTCCAGTGAAGAGCAACATCGGGTCATAGGTGAGCATCTTGGCTGATGGAGGAACTCCTACAACCACGCTGGTCCCATAGTTCATGTGGCAGGATGCCAGGGCATCAATCTG chr4 + 94230402 61562501 61562500 61562651 61562501 61562500 61562651 151 TTGGCTTCCT-ACCTCCAACCACAGTCCCTTTACAGGTGCGCCCACTTAGTAGAAGGAAAGGATCAATGGGAACTGTCGAACCAGCAGGTGATACTCCAACCATCACACAGACCCCGGTGTTCATATTGCAAGAGGCCAGGGCAGCAATCTG ...x:.....-........xx...xx:..:..x..x.....:...x.x.:x..x.:x.xx..:...xx..x:.x::..xx:x.x.xx..x.:x.....x..x.:...:.x.::...:xx......:.x...:..x.........x....... 10M1D141M 98/151 64.9% 151/94230402 0.0% 1/151 0.7% 37856472 NA +8134 chr4 + 190214555 99418979 99418978 99419141 163 TCCTGACCTCCAAAGACACATCCCTTCCATGTGCGTCCAGTGAAGAGCAACATCGGGTCATAGGTGAGCATCTTGGCTGATGGAGGAACTCCTACAACCACGCTGGTCCCATAGTTCATGTGGCAGGATGCCAGGGCATCAATCTGAGTTTAAAACGGAGGAG chr4 + 94230402 61582854 61582853 61583016 61582854 61582853 61583016 163 TCCTCACCTCCAAAGACGGACCCTTTCCAGGTGCGACCACTGAAGATAAGCATGGGGTCAAAACTAATTTTTTGTGCTGCAGGAGGCACTCCCACAATCACGCTGACTCCGTAGTTGTTGTGGCAAGAGGCCAAGGCCGCAGTCTGCGTTTAAAACAGAGAGG ....x............:x.:..:.....x.....x...x......xx.:...x......x.:x.:.x:x.:.xx....xx.....x.....:....:.......:::..:.....xx.......:..x....:...xx..:....x.........:...::. 163M 120/163 73.6% 163/94230402 0.0% 0/163 0.0% 37836125 NA +13149 chr4 + 190214555 99420512 99420511 99420796 285 TTCTCAAATTTTGGGTCTTACCATGGTTTCAAGATGCCCAATAACTTCAAAGGTGTATCCCACGTTGTTGCCTGTCATTTCTGACAGCACCTCACTGATGGGTTTGGTAGAGTCCTTGGGACTGATACACTCAGTGGCACCTACAGCCATGGCCTTCTCAAATTTGTCTTTGTTGAGGTCAATCCCAATGATCCTAGATGCACCAGCTGACTTACAGCCCATGATGACTGACAGGCCAACTCCTCCCAGGCCAAAGACGACGCAAGTGGAACCAGGTTTGACCTG chr4 + 94230402 61556570 61556569 61556851 61556570 61556569 61556851 282 TTCTAAAATAT---GACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCGATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTG ....x....x.---.x.x.....x...x..x:x:xx......::.........x...x:.....::..x:..x.....:..x.xx.......xx:x...:..:..xx.::......x:..::....:.....:.....x..:.:xx.:x.......xx....:.....:.......x:..:..xx.......x.x:..:..x.......x...:..........::..x..x.....:........x............:.:..:.....:..x.....x..... 11M3D271M 205/282 72.7% 282/94230402 0.0% 3/282 1.1% 37863942 NA +13188 chr4 + 190214555 99420512 99420511 99420796 285 TTCTCAAATTTTGGGTCTTACCATGGTTTCAAGATGCCCAATAACTTCAAAGGTGTATCCCACGTTGTTGCCTGTCATTTCTGACAGCACCTCACTGATGGGTTTGGTAGAGTCCTTGGGACTGATACACTCAGTGGCACCTACAGCCATGGCCTTCTCAAATTTGTCTTTGTTGAGGTCAATCCCAATGATCCTAGATGCACCAGCTGACTTACAGCCCATGATGACTGACAGGCCAACTCCTCCCAGGCCAAAGACGACGCAAGTGGAACCAGGTTTGACCTG chr4 + 94230402 61569376 61569375 61569657 61569376 61569375 61569657 282 TTCTAAAATAT---GACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCGGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACTACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCCGGTTTTACCTG ....x....x.---.x.x.....x...x..x:x:xx......::.........x...x:.....::..x:..x.....:..x.xx.......xx:x...:..:..xx.::......x:..::....:.....:.....x..:.:xx.:x.......xx....:.....:.......x:.....xx.......x.x:..:..x.......x...:..........:x..x..x.....:........x............:.:..:.....:..x.....x..... 11M3D271M 206/282 73.0% 282/94230402 0.0% 3/282 1.1% 37851136 NA +13331 chr4 + 190214555 99420512 99420511 99420798 287 TTCTCAAATTTTGGGTCTTACCATGGTTTCAAGATGCCCAATAACTTCAAAGGTGTATCCCACGTTGTTGCCTGTCATTTCTGACAGCACCTCACTGATGGGTTTGGTAGAGTCCTTGGGACTGATACACTCAGTGGCACCTACAGCCATGGCCTTCTCAAATTTGTCTTTGTTGAGGTCAATCCCAATGATCCTAGATGCACCAGCTGACTTACAGCCCATGATGACTGACAGGCCAACTCCTCCCAGGCCAAAGACGACGCAAGTGGAACCAGGTTTGACCTGTG chr4 + 94230402 61562877 61562876 61563160 61562877 61562876 61563160 284 TTCTAAAATAT---GACATACCAGGGTATCTGCGGTCCCAATGGCTTCAAAGGAGTAGTCCACGCCGTGACCGGTCATCTCGGTGAGCACCTGCTGGATAGGCTTCTTGAAGTCCTGAGGGTTGATGCACTCAGTGGCTCCCATCTCTTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACAGCACAGGTGGAGCCCGGTTTTACCTGCG ....x....x.---.x.x.....x...x..x:x:xx......::.........x...x:.....::..x:..x.....:..x.xx.......xx:x...:..:..xx.::......x:..::....:...........x..:.:xx.:x.......xx....:.....:.......x:.....xx.......x.x:..:..x.......x...:..........::..x..x.....:........x...........::.:..:.....:..x.....x.....:. 11M3D273M 207/284 72.9% 284/94230402 0.0% 3/284 1.1% 37857635 NA +10921 chr4 + 190214555 99420528 99420527 99420807 280 CTTACCATGGTTTCAAGATGCCCAATAACTTCAAAGGTGTATCCCACGTTGTTGCCTGTCATTTCTGACAGCACCTCACTGATGGGTTTGGTAGAGTCCTTGGGACTGATACACTCAGTGGCACCTACAGCCATGGCCTTCTCAAATTTGTCTTTGTTGAGGTCAATCCCAATGATCCTAGATGCACCAGCTGACTTACAGCCCATGATGACTGACAGGCCAACTCCTCCCAGGCCAAAGACGACGCAAGTGGAACCAGGTTTGACCTGTGGAGAGGAAT chr4 + 94230402 61541996 61541995 61542274 61541996 61541995 61542274 279 CTCACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATGCACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTA-GGTGAAAAAT ..:......::.:...x:.xx..:...xx:.....x.x...x:.:..::::::::.x........x:x.........x:xx.....:..xx:.:....:.x:..:..:..:.......::..x..x.xxx..x....:..xx..x.xx.:.::.....x.x......x..........x:.....x..x....x:...........:.::::x.x...x...........:.::........x:.:..x.....:.......:x....:-..x..::... 269M1D10M 187/279 67.0% 279/94230402 0.0% 1/279 0.4% 37878532 NA +13850 chr4 + 190214555 99420530 99420529 99420795 266 TACCATGGTTTCAAGATGCCCAATAACTTCAAAGGTGTATCCCACGTTGTTGCCTGTCATTTCTGACAGCACCTCACTGATGGGTTTGGTAGAGTCCTTGGGACTGATACACTCAGTGGCACCTACAGCCATGGCCTTCTCAAATTTGTCTTTGTTGAGGTCAATCCCAATGATCCTAGATGCACCAGCTGACTTACAGCCCATGATGACTGACAGGCCAACTCCTCCCAGGCCAAAGACGACGCAAGTGGAACCAGGTTTGACCT chr4 + 94230402 61583481 61583480 61583746 61583481 61583480 61583746 266 TACCATGGTTTCAATACGGCCGATGACCTCGAAGGAGTAGTCCACACCCTGGCCAGTCATTTCAGTCAGCACTTCATGAATAGGCTTCTTGAAATCTTTAGGGTTGATGCACTCGGTGGCTCCTAGCTCCTTGGCCTTGGCAAACTTGTCCTTGTTGATATCAATGGCAATGATGCGGGACGCTCCAGCTGCCTTGCAGCCCATGACAACAGAGAGGCCGACTCCTCCAAGGCCAAAGACGGCACAGGTGGAGCCTGCTTCTACCT ..............x.:.x..:..:..:..:....x...x:....:::x.x...x........x.x......:...:x:..:..:..xx.::.:..:..:..::....:.....:.....x....xxx..x.......xx....:.....:.......x:.....xx.......x.x:..:..x.......x...:..........::..x..x.....:........x............:.:..:.....:..x.x..:x.... 266M 197/266 74.1% 266/94230402 0.0% 0/266 0.0% 37837049 NA +3061 chr4 + 190214555 99422783 99422782 99422875 93 AATAATGTATTAGGTCAAAGATTCTTTTTTTTTTCTAATAAAATAGACCTATTTTATTTTTTTTTCTAATAAAATAGATCTATTTTATTTATT chr4 + 94230402 34431506 34431505 34431597 34431506 34431505 34431597 92 AATAAGGCAAAAGGG-AAAGATTTTTTTTCTTTTTTAATTTAACGTACTTCTTATATAATTCTTTTAAATTGAAAAGATTTTTTTTCTTTTTT .....x.:.xx...x-.......:.....:....:....xx..::x..:.x..x...xx..:...:x...x:..x....:.x....x...x.. 15M1D77M 64/92 69.6% 92/94230402 0.0% 1/92 1.1% 64991277 NA +9534 chr4 + 190214555 99427759 99427758 99427976 218 ACCCTGTTTCTTACCTTGCCAGTTTTAACAGCAGCGCCATATCCAGTGGAAAACCCACAGCCAATTAAACAGACTTTCTCAGGAGGAGCTGCATCATCAATCTTAGCAACAGAAGATTCATCCACCACTGTGTACTCGGTAAATGTACTGGTGTTCATGAAGTGGTGGACTGGTTTGCCCTTGCATGTAAATCTGGTGGTGCCATCAGCCAGTACTCC chr4 + 94230402 61542808 61542807 61543025 61542808 61542807 61543025 218 ACCATAGCCTTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCC ...x.:x:::.......:x....x...........x.....x..x..:..:.xx.....:..x.x:.::..x.....x..:::...x......xx...x........x..x..::xx..:x................x.x:..x..:..:..x::...........::.::x.:..x..:.....x..:......:.x..:.......x..xx.x... 218M 153/218 70.2% 218/94230402 0.0% 0/218 0.0% 37884951 NA +14542 chr4 + 190214555 99427768 99427767 99428235 468 CTTACCTTGCCAGTTTTAACAGCAGCGCCATATCCAGTGGAAAACCCACAGCCAATTAAACAGACTTTCTCAGGAGGAGCTGCATCATCAATCTTAGCAACAGAAGATTCATCCACCACTGTGTACTCGGTAAATGTACTGGTGTTCATGAAGTGGTGGACTGGTTTGCCCTTGCATGTAAATCTGGTGGTGCCATCAGCCAGTACTCCA------CGACCAGTAATACTGTTTGATACATCAAATACACGTATTAATTAATTCAAT---TCAAA---AATTAGCATAGGAAAAATGTAAATACATTAAAG--TAAAAATGACT---GAAACCTACTCGCTCCTAATGCAAAGGTTGCCATCTGGGTTGCGACAAGCATTGCATTCTCTACATTGTGGCAGAAAGAGAGGGATGACTTTGTCACCTA-CAGGAAAAAAATCATGAT---------------ATAAGATGCTGTTCATTAATGTTAAAATATGAAATTAACA chr4 + 94230402 61584412 61584411 61584906 61584412 61584411 61584906 495 CTTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCATTAGTCCAGTAGGTGAAGAAGAAAGACTGTTTGAAAGAT-AACCAGACATAATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAAATCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAAACAGTAATGATTAAACAAACAGGCACACAAGAAG-----CATTCAGGTAAAAACATAAAACAAATA .........x....:.xx.x.:....x.....x.....x..:..:...........:.:...:.....:..x:.......x...xx...x..:..:..x:...x..x...:.x:..:..:.....:..:..:..x.....x..:::x.::..:..:..:.:..x...x.....:..x.....:..:.....:..........x..x....------x:.xx..x..x.........x.x..-..x:.x..:..x.:::x...xx:..---...x.---::.:..:x.x.x:x..:.xx....xx.x...:.--..x..:.:..:---.....::....::.::.......x.::..:..x.:x.x.:.xx::....xx:....:....:...:.....x.x......x..:..:...x:...x....-x.:.....x.:.x.....---------------.:....x.-----....x.x..x....:..:...:x..:. 210M6I25M1D25M3I5M3I33M2I11M3I100M1I18M15I8M5D27M 317/462 68.6% 495/94230402 0.0% 39/462 8.4% 37843356 NA +12239 chr4 + 190214555 99427771 99427770 99428634 864 ACCTTGCCAGTTTTAACAGCAGCGCCATATCCAGTGGAAAACCCACAGCCAATTAAACAGACTTTCTCAGGAGGAGCTGCATCATCAATCTTAGCAACAGAAGATTCATCCACCACTGTGTACTCGGTAAATGTACTGGTGTTCATGAAGTGGTGGACTGGTTTGCCCTTGCATGTAAATCTGGTGGTGCCATCAG---CCAGTACTCCACGACCAGTAATACTGTTTGATACATCAAATACACGTATTAATTAATTCAATTCAAAAATTA---------GCATAGGAAAAATGTAAATACATTAAAGTA-------AAAATGACTG--------AAACCTACTCGCTCCTAATGCAAAGGTTGCCATCTGGGTTGCGACAAGCATTGCATTCTCTACATTGTGGCAGAAAGAGAGGGATGACTTTGTCACCTACAGGAAAAAAATCATGATATAAGATGCTGTTCATTAATGTTAAAATATGAAATTAACAAATGTGAATTGAGC----------CCATACTATAG-GTAAAACTTTTA--------------AAAATATATTCTAAGGT--TTATAAACACCGTAAGGTTTGCCTTCTAAAGGTTGAGGTTTTGCCAAATTAAAC-------ATTACTCAGTAAAATCCATTCTTGTATCC--------TTTTAATTCCCTGAATTGTGTTAAGGATCCCTCTAATAATTCCTAGTGTGTGCTATTTCCTTTGATAGGCTAATCAAAGCCTAATTATTTCAAACTTGTGGTTTGACACCTGCATA---TACCTGGTTTCACTGTAGTCACTCCTTCTCCAATGCTCTCTACAATCCCAGTTGCCTCATGTCCCACAATCACTGGAAACTTGGACACCAT----TGTTCCTTTTATCACATGGTCATCTGTGCGACAGATTCCTGTGGCCAAAATCTGT chr4 + 94230402 61569766 61569765 61570608 61569766 61569765 61570608 843 ACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGAT---GTGCATGTGTTG-----TGCATTATATAAGTTACATGTTTGTGCATGTCAGAACTGTTGCCAGTTTAGCGTGTTTGGGTAAAGGGGTAGGTGAAAGCAAACGCACTGTGTTTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCTGGAACAAAGCAGATCCAGCGTTATGTGCCCCTCGCTGA-------GCAGCCTATTGGCATGCCTCAGCTGAGCTTTCTGATGACGGCACCCCGGCGTGAACCCTCTGCTTTCCCTGTCCACAGAACATGTTCTGAGCCCGTCCCAAGCACT---------------------TTGTGGTATTGATGAGGAAAGTGTGTGTGATAGCGTAGCACAAGTGGTG--TGCAGCCAGCGGGAGTTTCTGATCTCTGAGCAGCCTTACAGG--------------------------------CTTTGAGAG----------------------CTGACTCCTGGCT----GCGTGCATTGGTTACCTGGCTTCACAGAGGTCACTCCTTCTCCAATGCTCTCCACTATCCCAGCTCCTTCGTGGCCTGGGATGACTGGGAA-TTGTAAATCAGGAAATGTGCCATCAAGAACATGGTCATCTGTGCGACAGATCCCTGTGGCCACGATCTGT ......x.:..x..:........x.....x..x....:...x......x...x:..:........x..x:....x..x...x....x.....:..x.x:.x:x.:...xx:..x..x.....:..x.:...x..:...x.x:xx.x......x....::x....x..:.....x..:..:........x:::....---:...xx:.:xxx.x:....:.x:.....x..x:x..---:.:..:..:..:-----.x..x.x:.x..:...---------....:xx.:..x...x:x:.xx...:x..:-------...:x.::x.--------....x:...xxx.::.x.x...:x:....xx:..x..:..xx::..::x::.........:...:..x..x..x:::.:::.............x...:x.:x...:x.:x:x:::::.x.x:...:x:..::.:.-------::.xxxx...::..x::x.x.::.....----------.x::..:x::.-..:..x.:.:.:--------------.:..:..:....:..x:--.:x:..:...:---------------------...x...x...x::.:xx..::-------..x:.x:..:.x..x:x:.x--..:.x..--------...:x:x..:....::x.:x...x:.:--------------------------------......x..----------------------.x:...:x...:.----:.x.....x---.......:.....x.x:.......................:..x.......:.x.:..:..x..::x:..x.....:..-...x.x.:..x----...x..x.:x.xx.......................:..........x:...... 196M3I36M3D12M5D16M9I30M7I10M8I136M7D28M10I11M1I12M14I17M2I11M21D22M7I20M2D7M8I27M32D9M22D13M4D9M3I79M1D11M4I55M 488/767 63.6% 843/94230402 0.0% 173/767 22.6% 37858005 NA +11874 chr4 + 190214555 99427771 99427770 99428634 864 ACCTTGCCAGTTTTAACAGCAGCGCCATATCCAGTGGAAAACCCACAGCCAATTAAACAGACTTTCTCAGGAGGAGCTGCATCATCAATCTTAGCAACAGAAGATTCATCCACCACTGTGTACTCGGTAAATGTACTGGTGTTCATGAAGTGGTGGACTGGTTTGCCCTTGCATGTAAATCTGGTGGTGCCATCAG---CCAGTACTCCACGACCAGTAATACTGTTTGATACATCAAATACACGTATTAATTAATTCAATTCAAAAATTA---------GCATAGGAAAAATGTAAATACATTAAAGT----------AAAAATGACTGAAA-CCTACTCGCT----CCTAATGCAAAGGTTGCCATCTGGGTTGCGACAAGCATTGCATTCTCTACATTGTGGCAGAAAGAGAGGGATGACTTTGTCACCTACAGGAAAAAAATCATGATATAAGATGCTGTTCATTAATGTTAAAATATGAAATTAACAAATGTGAATTGAGC----------CCATACTATAG-GTAAAACTTTTA--------------AAAATATATTCTAAGGT--TTATAAACACCGTAAGGTTTGCCTTCTAAAGGTTGAGGTTTTGCCAAATTAAACATTACTCAGTAAAATCCATTCTTGTATCCTTTTAATTCCCTGAATTGTGTTAAGGATCCCTCTAATAATTCCTAGTGTGTGCTATTTCCTTTGATAGGCTAATCAAAGCCTAATTATTTCAAACTTGTGGTTTGACACCTGCATA-----------TACCTGGTTTCACTGTAGTCACTCCTTCTCCAATGCTCTCTACAATCCCAGTTGCCTCATGTCCCACAATCACTGGAAA--CTTGGACACCATTGTT-CCTTTTATCACATGGTCATCTGTGCGACAGATTCCTGTGGCCAAAATCTGT chr4 + 94230402 61563267 61563266 61564109 61563267 61563266 61564109 843 ACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGAT---GTGCATGTGTT-----GTGCATTATATAAGTTACATGTTTGTGCATGTCAGAATTGTTGACAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCTGGAACAAAGCAGATCCAGCATTATGTGCCCCTCACTGG----GCAGCCTG---TTGGCGTGCCTCAGCTGAGCTTTCTGATGACGGCACCCCGGCGTGAACCCTCTGCTTTCCCTGTCCACAGAACATGTTCTGAGCCCGTCCCAAGCACTTTGTGGT------------------------------------ATTGATGAGGAAAGTGTGTG-TGATAGC------ATAGCACAAGTGGTGTGCAG----CCAGCGGGAGTTTCTGAT------------CTCTGAGCAGCC--TTACAGGCT-------------TTGAGAGCTGACTCCTGGCTGCGTGCGTTGGTTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGT ......x.:..x..:........x.....x..x.....:..x......x...x:.x.........x..x:....x..x...x....x.....:..x.x:.x:x.:...xx:..x..x.....:..x.:...x..:...x.x:xx.x......x....::x....x..:.....x..:..:........x:::....---:...xx:.:xxx.x:....:.x:.....x..x:x..---:.:..:..:..-----:.x..x.x:.x..:...---------....:xx.:..x...x:.:.xx...:x..----------:::::.::x.....-.xx....:..----::.x.x...:x:....xx:..x..:..xx::..::x::.........:...:..x..x..x:::.:::.............x...:x.:x...:x.:x:x::::..x.x:...:x:...:.::----:x.::x..---..::.:x::x.x.::.....----------.x::..:x::.-..:..x.:.:.:--------------.:..:..:....:..x:--.:x:..:...:x.:x...------------------------------------...:x.x..x...:.x::.x-.x:..x.------..xx.x::.:.x....xx..----..xx:::x.:..:..::.------------..:...xx:..:--.:.x..x..-------------...x.:x:....x....xx.:-----------.......:.....x.x:.......................:..........:.x.:..:..x..:.x:..x.....:..--..xx.x..xx.xx...-....:..xx.....x.........:.:.....:..:.......xx...... 196M3I36M3D11M5D17M9I29M10I14M1I10M4I123M4D8M3D20M10I11M1I12M14I17M2I18M36D20M1D7M6D20M4D18M12D12M2D9M13D21M11I79M2I16M1I51M 491/775 63.4% 843/94230402 0.0% 157/775 20.3% 37864504 NA +11988 chr4 + 190214555 99427771 99427770 99428634 864 ACCTTGCCAGTTTTAACAGCAGCGCCATATCCAGTGGAAAACCCACAGCCAATTAAACAGACTTTCTCAGGAGGAGCTGCATCATCAATCTTAGCAACAGAAGATTCATCCACCACTGTGTACTCGGTAAATGTACTGGTGTTCATGAAGTGGTGGACTGGTTTGCCCTTGCATGTAAATCTGGTGGTGCCATCAG---CCAGTACTCCACGACCAGTAATACTGTTTGATACATCAAATACACGTATTAATTA--ATTCAATTCAAAAATTAGCATAGGAAAAATGTAAATACATTAAAGTAA------AAATGACTGAAACCTACTCGCT----CCTAATGCAAAGGTTGCCATCTGGGTTGCGACAAGCATTGCATTCTCTACATTGTGGCAGAAAGAGAGGGATGACTTTGTCACCTACAGGAAAAAAATCATGATATAAGATGCTGTTCATTAATGTTAAAATATGAAATTAACAAATGTGAATTGAGC----------CCATACTATAG-GTAAAACTTTTA--------------AAAATATATTCTAAGGT--TTATAAACACCGTAAGGTTTGCCTTCTAAAGGTTGAGGTTTTGCCAAATTAAACATTACTCAGTAAAATCCATTCTTGTATCCTTTTAATTCCCTGAATTGTGTTAAGGATCCCTCTAATAATTCCTAGTGTGTGCTATTTCCTTTGATAGGCTAATCAAAGCCTAATTATTTCAAACTTGTGGTTTGACACCTGCATA-----------TACCTGGTTTCACTGTAGTCACTCCTTCTCCAATGCTCTCTACAATCCCAGTTGCCTCATGTCCCACAATCACTGGAAA--CTTGGACACCATTGTT-CCTTTTATCACATGGTCATCTGTGCGACAGATTCCTGTGGCCAAAATCTGT chr4 + 94230402 61556960 61556959 61557792 61556960 61556959 61557792 833 ACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTTCAGTGAGGCTGTTGGAAGGAT---GTGCATGTGTTGTGCATTATATAATGTACATGTCAGAATTGTTGCCAGTTTAGCGTGTTTGGGTAAGGGGGTAGGTGA---AAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAACTGCATTCTCCACACTGAGGAAGTCCAAAGAGGATGACTTTGTCTCCTGGAACAAAGCAGATCCAGCATTAGGTGCCCCTCGCTGG----GCAGCCTG---TTGGCATGCCTCAGCTGAGCTTTCTGATGACGGCACCCCGGCGTGAACCCTCTGCTTTCCCTGTCCACAGAACATGTTCTGAGCCCGTCCCAAGCACTTTGTGGT------------------------------------ATTGATGAGGAAAGTGTGTG-TGATAGC------ATAGCACAAGTGGTGTGCAG----CCAGCGGGAGTTTCTGAT------------CTCTGAGCAGCC--TTACAGGCT-------------TTGAGAGCTGACTCCTGGCTGCGTGCGTTGGTTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGT ......x.:..x..:........x.....x..x.....:..x......x...x:.x.........x..x:....x..x...x....x.....:..x.x:.x:x.:...xx:..x..x.....:..x.:...x..:...x.x:xx.x......x....::x....x..:.....x..:..:........x:::....---:...xx:.:xxx.x:....:.x:.....x..x:x..---:.:..:..:..:xx:.--..x:...x:.x.x:.:..x..x.xx:xx.xx.x.:::::..x::....------.::...---..:.xx....:..----::.x.x...:x:....xx:..x..:..xx::..::x.:.........:...:..x..x..xxx:.:::.............x...:x.:x...:x.:x:x::::..x..:...:x:..::.::----:x.::x..---..::..x::x.x.::.....----------.x::..:x::.-..:..x.:.:.:--------------.:..:..:....:..x:--.:x:..:...:x.:x...------------------------------------...:x.x..x...:.x::.x-.x:..x.------..xx.x::.:.x....xx..----..xx:::x.:..:..::.------------..:...xx:..:--.:.x..x..-------------...x.:x:....x....xx.:-----------.......:.....x.x:.......................:..........:.x.:..:..x..:.x:..x.....:..--..xx.x..xx.xx...-....:..xx.....x.........:.:.....:..:.......xx...... 196M3I36M3D16M2I48M6I6M3D13M4I123M4D8M3D20M10I11M1I12M14I17M2I18M36D20M1D7M6D20M4D18M12D12M2D9M13D21M11I79M2I16M1I51M 489/777 62.9% 833/94230402 0.0% 143/777 18.4% 37870811 NA +6841 chr4 + 190214555 99428489 99428488 99428665 177 TACCTGGTTTCACTGTAGTCACTCCTTCTCCAATGCTCTCTACAATCCCAGTTGCCTCATGTCCCACAATCACTGGAAACTTGGACA---CCATTGTTCCTTTTATCACATGGTCATCTGTGCGACAGATTCCTGTGGCCAAAATCTGTGTTC----AAAGACAAAAACATTGCACCAATCAAC chr4 + 94230402 61586052 61586051 61586232 61586052 61586051 61586232 181 TACCTGGCTTTAACGAAGTTACTTTCTCCCCAACACTTTCTATGACACCAGCTGCCTCGTGCCCAAGGATTATTGGAAA---AGGCATAGCCAGTGCACCAGTCACCACATGGTCATCAGAGCGACAGATCCCCGTGGCTACAATCTGATTTAGAAGAAAGGCGAGAACGTTTCAGCATTTCAC .......:..:.x:.x...:...:::..:....::..:....::.:x....:......:..:..x.x:..:.:......---:.:..---...x..:x..xx.:.:............x.x.........:..:.....:.x......xx..x----....:.:.:...:..x..x..x.:x.. 79M3D5M3I63M4I27M 122/174 70.1% 181/94230402 0.0% 10/174 5.7% 37842437 NA +6496 chr4 + 190214555 99429528 99429527 99429651 124 TTACCTTAATGCGAACTTCTTTAGTCTTTGGTGGGGCAACTTCTATTTCCTCAATGGAGAAGGGTTGCTTCTGCTCCCAAAGCACAGCTGCTTTGCATTTAATAACCTAAGAAATAGGCAAGTA chr4 + 94230402 61545499 61545498 61545622 61545499 61545498 61545622 124 TTACCTTGATGCGAACTTCATGAGCTTTTGGCGGAGCGACTTCCACCTCCTCAATAGAGAGAGGTTTACCTGCCTCCCAGGCAACAGCAGCCTTGCATTTAATAACCTAAAAGACAACAAAATA .......:...........x.x..::.....:..:..:.....:.::........:....::....xx:::xx......::xx.....x..:..................:.:.:.:xx..:.. 124M 90/124 72.6% 124/94230402 0.0% 0/124 0.0% 37884029 NA +6842 chr4 + 190214555 99429529 99429528 99429648 120 TACCTTAATGCGAACTTCTTTAGTCTTTGGTGGGGCAACTTCTATTTCCTCAATGGAGAAGGGTTGCTTCTGCTCCCAAAGCACAGCTGCTTTGCATTTAATAACCTAAGAAATAGGCAA chr4 + 94230402 61587167 61587166 61587286 61587167 61587166 61587286 120 TACCTTAATACGAACTTCATGTGCTTTTGGTGGGGCAACTTCCACTTCCTCAAGAGAAAATGGTTTATTCGCTTCCCACAGTACTGCTGCCTTGCATTTAATAACCTGCAAAAAGAGCAA .........:........x.xx.::.................:.:........x:..:..x....xx...xx:.....x..:..x.....:................:x:...x::.... 120M 93/120 77.5% 120/94230402 0.0% 0/120 0.0% 37842362 NA +8099 chr4 + 190214555 99469561 99469560 99469867 307 CACCTTGGTTTTAACAAAGCCTGTAACTTCAAAT---------ACTATGTTGTCACTCATTTCAATGAGCACGTGTCAGATAGGCTTCTCAAGATCCCTGGAACTAATAACATTCAGCAGCTCCCAGAGATATGGCCTTCTTAAATTTGTTTCTGTTGATGTCAATACCAATGATCCTGGAAGCACCAGTAGCTTTGCAACCCATAATAATAAAGAGACCAACTTCACCCAGGCCAAACACAGTACAAGTTAGAAAGAATTTGACCTAAATTATCAGAAGACACAGACATCCAAAGGCAATGCAGGCTGAGAAAGT chr4 + 94230402 61541998 61541997 61542300 61541998 61541997 61542300 303 CACCATGACTCCAACGTTACCGATACACTCAAATGAGTAGTCTACACCACCATCAGTCATTTCAACCAGCACCTCCTGTATGGGCTTCTCAAAGTCTTGAGGGCTAATG-CACTCAGCAGCTCCAAACTCCTTGGCTTTGGCATAGGTATTCTTGTTTATGTCAATGCCAATGATCCGGGATGCTCCTGCTGCTTTACAGCCCATAACAGTAGCCAGCCCAACTCCTCCTAAACCAAAGACTGCACACGTGGAGCCAGGTTCCACCTAGGT------GAAAAATAGAGAGCCATGAGCAA------CAGAGAAAAT ....x..::.::...:xx:..x:..xx:......---------..xx:::::...x.........:x.....x.x:::x..:..........::..::x:.::.....:-..:...........x.:xxx:x....:..xx:.x.xx.:..::....x........:..........x...x..x..x.:x.....:..:.......:.:..:xx..x......:.x..:.::.....x..x.:...x..x:::xx:::..:x.....::.------:.:.x.:...x.x...x::....------.x......:. 34M9I66M1D161M6D23M6D10M 187/294 63.6% 303/94230402 0.0% 22/294 7.5% 37927563 NA +7142 chr4 + 190214555 99471628 99471627 99471868 241 AAAGACTGTGATGGAAAAAAGCCA------ATCTAAATCCTTACCTTTGCATTATTTATTCCTGCCCTCTT-CCTGCAAGTAATCCACAGCCTATCAAACATACTTTTTCTAGTGGAGCATCAGGATCAATTTTGACAAATGCACTTTCTCTTAACACTGTGTATTCAGTGAAGGTGCTTGTGTTAGGGAGTTGGTAGATTGGTTTTCTTTTACAGGTAAATCTGGTGGTGTCATCAGCCATGGTTTC chr4 + 94230402 61542778 61542777 61543025 61542778 61542777 61543025 248 AGATACAGTTGCAGAGAAAGGCCAGAAGCAACCATAGCCTTTACCTTAGCAGTGTTAACAGCAGCCCCATAACCTGTAGAGATGCCACAACCCAGCAGGCACACTTTATCGAAAGGTGCTGCAGGATCTATCTTAGCTACTGAGATATCGGCCACCACTGTGTACTCCGAGAAGGTGCTAGTCCCCATGAAGTGGTAAATCTGCTTTCCTTTGCAGGTGAATCTGATCGTACCATCAGGCATGAGTCC .:.x..x..x:::..:...:....------.:.xx.::.:.......x...x.:..x.:xx.x....:x.x-....:.::x.xx.....:..:.x..::..:.....x..x.:x..x..xx.......x..:..::.x.x..x:x.x..xx::.x.........:..x.x.........x..x::x:x..:x.....:..:x.:....:...:.....:......:.x..::......x....:x.:. 24M6I41M1I176M 154/241 63.9% 248/94230402 0.0% 7/241 2.9% 37928850 NA +6452 chr4 + 190214555 99471653 99471652 99472058 406 TCTAAATCCTTACCTTTGCATTATTTATTCCTGCCCTCT-TCCTGCAAGTAATCCACAGCCTATCAAACATACTTTTTCTAGTGGAGCATCAGGATCAATTTTGACAAATGCACTTTCTCTTAACACTGTGTATTCAGTGAAGGTGCTTGTGTTAGGGAGTTGGTAGATTGGTTTTCTTTTACAGGTAAATCTGGTGGTGTCATCAGCCAT--GGTTTCACAAATACCATCAAAGCTTAGTAAAGCA---------------AACCATAAAA-----------GCACATATGAGAGATGAATGGAGGTATAGGATGAAATTTTAGTAA---------TTAAAG-AGACCTACTTGAATTGATTGCATATATTTCCTTTAGGGATCAAACAAGGGTCAGATTTTCCATACTGA------------AGGATGACTTTGTCTCCTGGAGAGAACAATGCA chr4 + 94230402 61563256 61563255 61563702 61563256 61563255 61563702 447 TCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTT--CAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAAGTTACATGTTTGTGCATGTCAGA-ATTGTTGACAGTTTAGCGTG---TTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAGCTGCATTCTCCACACTGAGGAAGTGGAAAGAGGATGACTTTGTCTCCTG----GAACAAAGCA ...:...x.:x.....x..:x.:..x.:xx.x....:x.-x....::::x..x......x.x.x..x...x.....x..:..x..x...x...x...x..:...:.x.:x.:::x:..xxx..xx..x........x.::..:.....xx.x:x::...:x..x.:...:x....:.:...:..:..:..:........x.::....x...--.....:::::x.--..x::.:...xxxx:...x.---------------x.::...x..-----------.::...:.x...-..x:x..:x:..x...x:..---...x:....---------.x....-.:..::...xx:...xxxx...xxx:..xxxx.:...:x....:..:::.:::x...:....:.....------------...................----......x... 39M1I171M2I12M2D20M15I10M11I12M1D20M3D9M9I6M1I68M12I19M4D10M 251/396 63.4% 447/94230402 0.0% 61/396 15.4% 37908397 NA +6686 chr4 + 190214555 99471653 99471652 99472081 429 TCTAAATCCTTACCTTTGCATTATTTATTCCTGCCCTCT-TCCTGCAAGTAATCCACAGCCTATCAAACATACTTTTTCTAGTGGAGCATCAGGATCAATTTTGACAAATGCACTTTCTCTTAACACTGTGTATTCAGTGAAGGTGCTTGTGTTAGGGAGTTGGTAGATTGGTTTTCTTTTACAGGTAAATCTGGTGGTGTCATCAGCCAT--GGTTTCACAAATACCATCAAAGCT-TAGTAAAGCAAACCATA---------------AAAGCACATATGAGAGATGAATGGAGGTATAGGATGAAATTTTAGTAA---------TTAAAG-AGACCTACTTGAATTGATTGCATATATTTCCTTTAGGGATCAAACAAGGGTCAGATTTTCCATACTGA------------AGGATGACTTTGTCTCCTGGAGAGAACAATGCAATCATTCATCAAAAAGTCTCTCT chr4 + 94230402 61556949 61556948 61557406 61556949 61556948 61557406 458 TCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGAGAAACCACAGGCAAACACACAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCCGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTTTGTGGTT--CAGTGAGGCTGTTGGAAGGATGTGCATGTGTTGTGCATTATATAATGTACATGTCAGA-ATTGTTGCCAGTTTAGCGTG---TTTGGGTAAGGGGGTAGGTGAAAGCAAACTCACTGTGATTTCAGGCAGTAGTTGGAGTCAGGATTCAAGCAGAAACTGCATTCTCCACACTGAGGAAGTCCAAAGAGGATGACTTTGTCTCCTG----GAACAAAGCAG--ATCCAGCATTAGGTGCCCCT ...:...x.:x.....x..:x.:..x.:xx.x....:x.-x....::::x..x......x.x.x..x...x.....x..:..x..x...x...x...x..:...:.x.:x.:::x:..xxx..xx..x........x.::..:.....xx.x:x::...:x..x.:...:x....:.:...:..:..:..:........x.::....x...--.....:::::x.--..x::.:...-.x.x..:.xx:xx...:---------------..x.:....:.x...-..x:x..xx:..x...x:..---...x:....---------.x....-.:..::...xx:...xxxx...xxx:..xxxx.:...:x....:..:::::::x...:....:.....------------...................----......x...:--..:..x..xx.:..x:.:.. 39M1I171M2I12M2D10M1I17M15I15M1D20M3D9M9I6M1I68M12I19M4D11M2D20M 263/417 63.1% 458/94230402 0.0% 53/417 12.7% 37914704 NA +6355 chr4 + 190214555 99471653 99471652 99471867 215 TCTAAATCCTTACCTTTGCATTATTTATTCCTGCCCTCT-TCCTGCAAGTAATCCACAGCCTATCAAACATACTTTTTCTAGTGGAGCATCAGGATCAATTTTGACAAATGCACTTTCTCTTAACACTGTGTATTCAGTGAAGGTGCTTGTGTTAGGGAGTTGGTAGATTGGTTTTCTTTTACAGGTAAATCTGGTGGTGTCATCAGCCAT--GGTTT chr4 + 94230402 61569755 61569754 61569972 61569755 61569754 61569972 218 TCTGAATACCAACCTTGGCGGTGTTGACAGCAGCCCCATAGCCTGTGGGAAAACCACAGGCAAGCAAGCAGACTTTGTCCAGAGGTGCAGCAGCATCTATCTTGGCCAGGGTGTACTCAGGTACAACAGTGTATTCTGCAAAAGTGCTGTTCCAGAGGAAGTGTTGGATCTGTTTCCCTTTGCAAGTGAACCTGGTGGTCTTGTCAGGCATCAGGTTT ...:...x.:x.....x..:x.:..x.:xx.x....:x.-x....:::.x..x......x.x.x...:..x.....x..:..x..x...x...x...x..:...:.x.:x.:::x:..xxx..xx..x........x.::..:.....xx.x:x::...:x..x.:...:x....:.:...:..:..:..:........x.::....x...--..... 39M1I171M2I5M 139/215 64.7% 218/94230402 0.0% 3/215 1.4% 37901898 NA +10844 chr4 + 190214555 99471661 99471660 99472115 455 CTTACCTTTGCATTATTTATTCCTGCCCTCTT-CCTGCAAGTAATCCACAGCCTATCAAACATACTTTTTCTAGTGGAGCATCAGGATCAATTTTGACAAATGCACTTTCTCTTAACACTGTGTATTCAGTGAAGGTGCTTGTGTTAGGGAGTTGGTAGATTGGTTTTCTTTTACAGGTAAATCTGGTGGTGTCATCAGCCATGGTTTC------------ACAAATACCATCAAAGCTTAGTAAAGCAAACCATAAAAGCACATATGAGAGATGA-ATGGAG--------GTATAGGATGAAATT------------TTAGTAATTAAAGAGACCTACTTGAATTGATTGCATATATTTCCTTTAGGGATCAAACAAGGGTCAGATTTTCCATACT------------GAAGGATGACTTTGTCTCCTGGAGAGAACAATGCAATCATTCATCAAAAAGTCTCTCTGGAATGTTGAAAGGATAAATATATACAAAAGACT chr4 + 94230402 61584412 61584411 61584908 61584412 61584411 61584908 497 CTTACCTTGGCAGTCTGCAGAACAGCCCCATAACCAGTTGAGAATCCACAGCCAATCAGACAAACTTTTTCCAGAGGAGCAGCAGAATCTATTTTGGCTGCAGCAGTTTCGTGTACTACCGTGTATTCAGTGAAAGTACTTGTACCAACAAAATGATGAATTGCTTTCCCCTTACAGGTAAACCTAGTGGTACCATCAGCCATTAGTCCAGTAGGTGAAGAAGAAAGACTGTTTGA----AAGATAACCAGACATAATGGCAAATGAGATCTGTCACATGTGGTCAGTTTTGTGTAAGTTAAAATCAAATAAGGGTTACAAGTAACCTAGGAAACTCACTCATTTTTAATGCACAAATTACCCTTGGTGCTTAAGCAAGATCTGCACTCTCCACACTGTGGAACAAAGAGTGGAATAACTGCGTCTCCTAGAAAGAAAACAGTAATGATTAAACAAACAGGCACACAAGAAGCATTCAGGTAAAAACATAAAACAAATACT ........x...x.x.x:.xxx.x....:x.x-..x.:x::x...........x....:...x........:..x......x...:...x......:.x:xx...x....x:x..x:..:..............:..:.....:::.:x:.:x..:.::....x...:.::...........:..:.....::..........x:x.:.------------.x...x..::.:x:.----.:x.x.:.x.:x.....x:...x..:x..xxx:.x.-...x:.--------..:..:.x.:....:------------:x.....::x.:..:..::...::xx..x.x....:.x...x..:..:.x.x.:..:....:x:::x.:.:....:...------------.x:.:..:...x:.......:..:....x.xx.:...x...x.x....x..x.x.x.x:...xxx.xx.:.x.x...:...x.xx...x... 32M1I176M12I15M4D36M1I6M8I15M12I79M12I92M 290/451 64.3% 497/94230402 0.0% 50/451 11.1% 37887249 NA +5349 chr4 + 190214555 99476735 99476734 99476898 164 GTGTTATTTTACCTGGTTTTACCTTTCTCACTCCTTTTCCAATACTCTCTACAATTCCAGCTGCTTCGTGTCCTAGAAG-AAATGGATATTTAGTTTTTAATT--TTCCATTAATTGCACAGTCGTCTGTGCCACAAAAGCTGATGGCCAGAATCTGTGAGGAGATA chr4 + 94230402 61544774 61544773 61544940 61544774 61544773 61544940 167 GTATTTTCTTACCTGGCTTTACTTTTGTTACTCCTTCCCCAACACTTTCTACAATTCCTGCTCCTTCATGACCCAGAATCACAGGGAAACATCCCTCGGGATCAGCACCACTCAGAGTATAGGCATCAGTGTGACAGAGAGCAGTGGCAACTATCTGTAAAGAAATA ..:..x.:........:.....:...x.:.......::....:...:...........x...x....:..x..:....x-.x.x...x.:x.xx:.:xx:..:--:x...:.x.xx.:.:..x.:..x...:x...:.::x:::....x.xx......:.:..:... 79M1I23M2I62M 108/164 65.9% 167/94230402 0.0% 3/164 1.8% 37931961 NA +4766 chr4 + 190214555 99476743 99476742 99476889 147 TTACCTGGTTTTACCTTTCTCACTCCTTTTCCAATACTCTCTACAATTCCAGCTGCTTCGTGTCCTAGAAGAAATGGATATTTAGTTTT---TAATTTTCCATTAATTGCACAGTCGTCTGTGCCACAAAAGCTGATGGCCAGAATCTGT chr4 + 94230402 61563960 61563959 61564109 61563960 61563959 61564109 150 TTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGT ........:..:..xxxxx.........:......:.....:.....:......x.......x.....:.x:.x...:x.x.:x::x.:---x..x..x..x.:x.xx:..::x..:......:x:..:.xx.:x:......xx...... 89M3I58M 97/147 66.0% 150/94230402 0.0% 3/147 2.0% 37912783 NA +4766 chr4 + 190214555 99476743 99476742 99476889 147 TTACCTGGTTTTACCTTTCTCACTCCTTTTCCAATACTCTCTACAATTCCAGCTGCTTCGTGTCCTAGAAGAAATGGATATTTAGTTTT---TAATTTTCCATTAATTGCACAGTCGTCTGTGCCACAAAAGCTGATGGCCAGAATCTGT chr4 + 94230402 61557643 61557642 61557792 61557643 61557642 61557792 150 TTACCTGGCTTCACGGAGGTCACTCCTTCTCCAATGCTCTCCACAATCCCAGCTCCTTCGTGGCCTAGGATGACTGGGAAATCTACGTCAGGAAAGTTACCTTCTAGAACATGTTCATCTGTGTGGCAGATCCCCGTGGCCACCATCTGT ........:..:..xxxxx.........:......:.....:.....:......x.......x.....:.x:.x...:x.x.:x::x.:---x..x..x..x.:x.xx:..::x..:......:x:..:.xx.:x:......xx...... 89M3I58M 97/147 66.0% 150/94230402 0.0% 3/147 2.0% 37919100 NA +5008 chr4 + 190214555 99488314 99488313 99488592 279 GCTTTTGCAACTGCTGTTATAGGGAGAGATTTATTCTTTCCACTATGCCTTGTCCTTGAGAATTATATGGGATACGAGTGAT-TGCTTAATATTCCATATAGAGAAAAATGTAGCTAAATATTGGCTAGTATAGCCTGGGGCATTATCTGTTTTAATAGAAGCTGGAATGCCCATCACTGCAAAACACTGCAAAAGGTGACATTTAACACAGGCAGAAGACTCTCCTGATTGGCATGTAGCCCAGACAAAGTGAGAAAAGGTGTCCACACATACGTGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ....:.x...x.:.:x..x..:x.xxxx....::::x...:.....xx::..x...xx:.:xxx:.x::......xx..:x.-..:..x.:x::....:.xx:x.:...:x:xx.x.:x:xx:.:.....:...x.....x....:........x..xx:x:x...x..:.....x..:.....:..x::xxx:..:..x.x..:x...::x::..xxxx:.....x.:...:xxx..:.....x.:...:...xx.x.x..:..:.:.x.:........ 82M1I197M 158/279 56.6% 280/94230402 0.0% 1/279 0.4% 80422993 NA +3075 chr4 + 190214555 99506394 99506393 99506475 82 TCCCTCCCTTCCTCCCTCCCTTCCTCCCTTCTTTCCTTTCTTTCTCTCTTTCTCTCTCACTTTCTTTCTTTCTCTTTCTCTC chr4 + 94230402 57372029 57372028 57372110 57372029 57372028 57372110 82 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .::..::::.:x.....x:.:....:.:::....xx:.x..x.:.:............x...x.....x..xx..x.:.... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 42134365 NA +3253 chr4 + 190214555 99506402 99506401 99506503 102 TTCCTCCCTCCCTTCCTCCCTTCTTTCCTTTCTTTCTC----------------TCTTTCTCTCTCACTTTCTTTCTTTCTCTTTCTCTCTCTTTTTTCTCTCTCCCTTTCTTTCTCT chr4 + 94230402 29058857 29058856 29058974 29058857 29058856 29058974 118 TTTCTTCTCACTTGGCTTGCTTCTTTTCTTCTTCCCACAGAATTCAGCAGTGACTTTTCCAGTCTACTTTTATTTTTTTCTCTTCTGTCCTCTTCCTTCTCCCTCCCTCTCCTTCTTT ..:..:.::x.:.xx..:x.......:...::.::.x.----------------.:..:.xx...xx:...x...:........::x::.....::.....:......:..:....:. 38M16I64M 66/102 64.7% 118/94230402 0.0% 16/102 15.7% 70447545 NA +3944 chr4 + 190214555 99506405 99506404 99506558 154 CTCCCTCCCTTCCTCCCTTCTTTCCTTTCTTTCTCTCTTTCTCTCTCACTTTCTTTCTTTCTCTTTCTCTCTCTTTTTTCTCTCTCCCTTTCTTTCTCTTTCTCTTTCCCTTCCTTACTTCCTTCTCTTTCTTTCTTTTTTCTTTCTTTCTTCT chr4 + 94230402 48010632 48010631 48010783 48010632 48010631 48010783 152 CTGCCTTCTTTTCTGCTGTACCTCCATTTTTTTTGTCTTTCTCCTTCACGTGGATTTTTTTTTTTACTAAATTCATATTTTCCCTTCCCAACTTTCCTAGTGCCTTTCCCTCTGTT--TTCATTCTCTGTCTCCTTCTCATAGCTGTTTCTTTT ..x...:.:..:..x.:x.x::...x..:...:.x........::....x.xxx..:...:.:..x..xxx.::x.x..:..:..:..:xx.....::xx.x:........::x..--...x......x...:::.:.:x.xx:.x......:. 116M2D36M 93/152 61.2% 152/94230402 0.0% 2/152 1.3% 51495773 NA +3059 chr4 + 190214555 99506469 99506468 99506523 55 TTCTCTCTCTTTTTTCTCTCTCCCTTTCTTTCTCTTTCTCTTTCCCTTCCTTACT chr4 + 94230402 12085024 12085023 12085078 12085024 12085023 12085078 55 TTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACT ...::...x..x....x..::.:..:...::..........::...:....:... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 87421445 NA +3794 chr4 + 190214555 99506539 99506538 99506674 136 CTTTTTTCTTTCTTTCTTCTCTTTCTCTTTCTTTT-CCTTTTTCTTTCTCATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCTTTTCTTTCTTTCTGTCTTT------CTGTCTGTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 21408807 21408806 21408948 21408807 21408806 21408948 142 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATT-CTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC .....x.:..:....:.x..xx....:.:.x....-:...........xx.:.xx:.::.:::..::.:.::x.xx:..x..-..................:x:...x------...:xx....x::......::.x:..... 35M1I46M1D25M6I29M 89/135 65.9% 142/94230402 0.0% 8/135 5.9% 78097732 NA +3658 chr4 + 190214555 99506544 99506543 99506663 120 TTCTTTCTTTCTTCTCTTTCTCTTTCTTTTCCTTTTTCTTTCTCATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCTTTTCTTTCTTTCTGTCTTTCTGTCTGTCTTTCTTTCT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x....:.x......:.x.......x.:.x....:.xxx.xx..:..x.:::.::......:.x::....:.:.x.:.xxx.:.::.:...:x....x:..x:x......::. 120M 74/120 61.7% 120/94230402 0.0% 0/120 0.0% 16529913 NA +3428 chr4 + 190214555 99506547 99506546 99506631 85 TTTCTTTCTTCTCTTTCTCTTTCTTTTCCTTTTTCTTTCTCATTTTCTTTCTTTCT--TTTTCTCTCTTGCTCTTTCTTTCTTTTCT chr4 + 94230402 41754625 41754624 41754711 41754625 41754624 41754711 87 TCTCATACTCTTTTCTCCATTTCTTTTCTTTTTTCTTTCCCATTTTATCACTTCCTAATATCCTCCAATATTATTTTTTTCCTTTTT .:..x.x..::.:.:..:x.........:..........:......x.:x...:..--.x.:...:xx.::.x...:....:...:. 56M2I29M 59/85 69.4% 87/94230402 0.0% 2/85 2.4% 57751922 NA +3425 chr4 + 190214555 99506549 99506548 99506638 90 TCTTTCTTCTCTTTCTCTTTCTTTTCCTTTTTCTTTCTCATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCTTTTCTTTCTTTC chr4 + 94230402 42359316 42359315 42359405 42359316 42359315 42359405 90 TCGTTCCTCTAGACCACCTTCTTTTCCCTCTTCTCTGTTATTTTCTTTCTTCTTTTTTTCATTCAGCTTTTTTGTTCAGTTGACTGTTTC ..x...:...xxx:.x.:.........:.:....:.x.:............::.....::x.::x...:...:x...xx..xx:.x.... 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 57147233 NA +3088 chr4 + 190214555 99506560 99506559 99506612 53 TTTCTCTTTCTTTTCCTTTTTCTTTCTCATTTTCTTTCTTTCTTTTTCTCTCT chr4 + 94230402 66421027 66421026 66421079 66421027 66421026 66421079 53 TTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCT ...:..:..............x.....:x....x....:x....:::..:... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 33085533 NA +3265 chr4 + 190214555 99506588 99506587 99506715 128 ATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCTTTTCTT-TCTTTCTGTCTTTCTGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTT chr4 + 94230402 63697116 63697115 63697239 63697116 63697115 63697239 124 ACTTTATTCCTCTCCTTTCCG---GTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT .:...x..:..:..:...:.x---x..:.:.:.....:...:..:-.::....:.:.:xx.x.:......xxx:::..x....:.:x.xx.......:..:--.:.::..:.......:....:.x:.. 21M3D21M1I55M2D26M 78/123 63.4% 124/94230402 0.0% 6/123 4.9% 35809472 NA +3314 chr4 + 190214555 99506614 99506613 99506688 75 GCTCTTTCTTTCTTTTCTTTCTTTCTGTCTTTCTGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 56241825 56241824 56241899 56241825 56241824 56241899 75 GCTCGTATCCTCTAATCTCCCTTTCTGTGTTTTTGTTTGTCTTTCCATCTTTCTCTCGACATTTCTGTGCTTCTT ....x.x:::...xx...::........x...:...:........:x.......:..xx:x.....x.x:..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 43264789 NA +3127 chr4 + 190214555 99518470 99518469 99518551 82 AAGACCCTGTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAATATATATATATATATATATATATATAGAGAGA chr4 + 94230402 49163116 49163115 49163199 49163116 49163115 49163199 84 AAAGTTTTATCCCTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAACAAGA ..:::::.:..:..::.:...:...............:..x...--..x...:.:.::.......x:.x...x..x:.:x:... 44M2I38M 55/82 67.1% 84/94230402 0.0% 2/82 2.4% 50355354 NA +3039 chr4 + 190214555 99518492 99518491 99518544 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x.x......:.:..:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 98023492 92191063 +3053 chr4 + 190214555 99518494 99518493 99518544 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 90030076 90030075 90030126 90030076 90030075 90030126 51 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ...x.......xxx:...::..............:.:.:............ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 9488418 NA +3162 chr4 + 190214555 99518494 99518493 99518545 52 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:......x........:.:..:...:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 98023494 92191061 +3217 chr4 + 190214555 99518496 99518495 99518543 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 98023496 92191059 +3194 chr4 + 190214555 99518498 99518497 99518547 50 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAGA chr4 + 94230402 1495000 1494999 1495049 1495000 1494999 1495049 50 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGA ...x.:.........x.:....x..........:.:..:...:....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 98023498 92191057 +6240 chr4 + 190214555 99549191 99549190 99549362 172 GAATCACTGTCCGATCCACCTTCCTCCATCCTGACAGACTGATTGTCATGAGAAGCACTTTCACAGGCTTTGTCTGTGGGAACAGCTCCTTTCCGTTGGGGCAAGATAGTAAAAAATGCTTCTTGCCAGTCTCTTGTTTCCAGGTATTCCAGAATAATTTCAAACACTGCAA chr4 + 94230402 61612663 61612662 61612822 61612663 61612662 61612822 160 GAGTCATTGTC---TTCACCTTCTTTCT------CAGATAGAGCACGTTGGGATGAA---TCATTGGCTTCTCCCAATGGCACTGCCCCTTTCCGCTGTGGCAAGACACTGAAAAAGGCCTCCTTCCAGTCTCTCTTCTCCAGGTATGCGAGGATGATTTCAAACACTGCAA ..:...:....---.:.......:.:.x------....:x..x:::xx..:..x.x.---...:x.....:x:.::xx..x..x..:........:..x.......:.x.:.....x..:..:.x.........:x.:.........x.x..:..:................ 11M3D14M6D23M3D112M 115/160 71.9% 160/94230402 0.0% 12/160 7.5% 37936528 NA +7990 chr4 + 190214555 99550851 99550850 99551004 154 CAGGTATATTT-------------TCAGTTTATCCCTTACAGCTTACCATGATTAACTGCCAAAACTTTTCGACTATTCATCTTCACAAAATTTCCAAGTGGGAGCTGTGCATGATTGATTCCATAATCTGACGCTTGTTTATATGTGAGTCCCTAAAACAAAGACA chr4 + 94230402 61616141 61616140 61616307 61616141 61616140 61616307 167 CAGGTATATTCAGTAATAGCGTAATCATTCTGTATTTTAGAACTTACCATGATTGACTGCTAACACTTTCCGACTGTTCATCTTCACAAAGTTTCCCAGAGGGAGCTGTGCATGACCAATTCCTTGCTCTACAGCTTTTTTGTAAGTAATTCCCTGAAGGAAAAGCA ..........:-------------...x.:.:.x::...x.:............:.....:..x.....:.....:..............:.....x..x...............:::.....x.:x...:xx....x...:..x..:.x.....:..:x...::.. 11M13I143M 118/154 76.6% 167/94230402 0.0% 13/154 8.4% 37934710 NA +9783 chr4 + 190214555 99553782 99553781 99553956 175 TACCTTGTGATGGTTGTGATCTACTAATCCTCCAATCACATAGGCCTTTGATTCATCTAATTCCTTCAGTATATTAGGTGAATCTGACGTAAGGTAAATCAGGTCTTCTTTCTTTATGAGTTCACTATAGTGCTCTGGTTTGATATGGATATCCTTTAAGACAACAGGGAAAGAG chr4 + 94230402 61617442 61617441 61617616 61617442 61617441 61617616 175 TACCTTGTGGTGATTATGATCCACCAGTCCTCCAATCACATAGGCCTTCCTCTCGTCAAGCTCACTGAGAACGTCTGGGGAATCTGAGGTGAGGTATACAAGGTCTTCTTTCTTTATTAGCTCACTATAGTGCTCTGTTCTAATTTGGATATCCTaaaaggaaaaaagaaaagag .........:..:..:.....:..:.:.....................:xx:..:..x.::..x:.x..x.::.:x..x........x..:.....x.:x.................x..:................x.:.:..x..........xx...:x..x.:.:...... 175M 134/175 76.6% 175/94230402 0.0% 0/175 0.0% 37936340 NA +6832 chr4 + 190214555 99556142 99556141 99556231 90 TTACCTTCCAGTTGACCCATCCTTTGTCATTTTCATCCATGTTCTTTTTCAGCTGGCCTCCGTGGCTTGTCAAGTAAAACTGATAAAAGA chr4 + 94230402 61618241 61618240 61618330 61618241 61618240 61618330 90 TCACCTTCCAGTTGACCCATCCTTTGTCATTTTCATTCATGTTGCTCTTCAGCTGTCCTCCATGGCTGGTCAAGTAAAACTTAGAAAAGA .:..................................:......x:.:........x.....:.....x.............x.x...... 90M 80/90 88.9% 90/94230402 0.0% 0/90 0.0% 37937901 NA +8815 chr4 + 190214555 99558046 99558045 99558214 169 TACCTTTAATACCATCAAGTGATCAAAACTACAGTCAATAATAAGGCGAAGGGTGCTATGAACAACATCTCTTCGAACACGTTTTCTGTCATGTCCATCTGAGTTTGGTTCCA--TTTGACATTGTCGCTCTAATTTTTTCCTCTTGCGTTTTTCTTTTCGCTTTTGTCTA chr4 + 94230402 61620030 61620029 61620198 61620030 61620029 61620198 169 TACCTTTAGCACCATCAAGTCATCAAAGCTGCAGTCCACAATGAGGCGAAGCGTGCTGGGAACGACGTCCCTTCGCATACGCTTTCTGTCATTCCCTTCATTACTGGGGTCTGACTTTGAC--TGACGTTCTAATTTTCTCTTCTGGCGTTTTTCTTTGCGTTTCTGCCTA ........::..........x......:..:.....x.:...:........x.....:x....:..:..:.....x.:...:..........x:..x..xxx::.x..x..::--......--..x..:.........:..:...x............x..:..:..:... 113M2I6M2D48M 129/167 77.2% 169/94230402 0.0% 4/167 2.4% 37938016 NA +3397 chr4 + 190214555 99562164 99562163 99562234 71 CCGTCTCCAAAAAAAAAAAAAAATTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGAAATTTT chr4 + 94230402 60568551 60568550 60568620 60568551 60568550 60568620 70 CCTTTTCTAAAAAAGAAAAACAGTGGT-TATACATATATATCTCTGTGTGTGTGTATGTGTATAAAGTCCT ..x.:..:......:.....x.:.x:.-....:......:.x.x...........:.....:.:..:.::. 27M1D43M 52/70 74.3% 70/94230402 0.0% 1/70 1.4% 38993613 NA +3010 chr4 + 190214555 99562172 99562171 99562222 51 AAAAAAAAAAAAAAATTATATATATATATATGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 60568562 60568561 60568612 60568562 60568561 60568612 51 AAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTAT ...:.....x.:x::.....:........x.x...........:.....:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 38993610 NA +8139 chr4 + 190214555 99574715 99574714 99574976 262 TTAATCATTAATAGTGAGCCCTTCAGTGAACTTAGGTCCTGATTTTGGAGTTTGGAGTCTGACCTTTCCCCAA---AGATAAACATGATTGTTGCAGGTTCTGAAGAGGGTCACTCCCTC---ACTGGCTGC--CATTGAAAG-AGTCCACTTCTCAGTGACTC----CTAGCTGGG---------CACTG---GATGCAGTTGAGGATT----GCTGGTCAATATGATTCTTCTTGCTGTGCTTTTTCTCTGCTTCATTTCCTCATATTCAGCTTCTGTTAAAGGTAAGT chr4 + 94230402 61628428 61628427 61628708 61628428 61628427 61628708 281 TTAATAATTAACTGGAAGTCCTTCCATGAACTTAGTACCTGAGTGTGGAATTTGGAATCTGACCTTTACTACATCTAGATAAACACG---GTGGCTGGCGCGGCAG-------CTCCCTCTGCAAGCGCTGCTCCATTGTCAGCAGTTCGCTTCTTGGAGGCTCTCTTCTTTCTTGGAGGCTTTTGCACTTCATGCTGCAGTCAGGAGCTCGGGGCAGTCCAGCATGATTGTTCTTACCGTGCTGTTCCTTTGCATCATTTCCACATATTCAGCTTCCGTTAAAGGTAGGT .....x.....:x.x:..:.....x:.........xx.....x.x....:......:..........x.:xx.---.........:.---..x..x..:x.x.x..-------.......---.xxx.....--.....xx..-...:.:.....::.x.:...----..xx..x..---------....x---.x......:::.:::.----..x.x:..::......x.....:.:.....x..:..:...x........x.............:..........:.. 73M3I11M3D16M7D7M3I9M2I9M1I20M4I9M9I5M3I16M4I77M 190/252 75.4% 281/94230402 0.0% 39/252 15.5% 37946287 NA +8224 chr4 + 190214555 99581886 99581885 99582094 209 TGTCATTATCTTTATGCAGGTCACACAACTGGTCTCTCATTAAATAATGACCGGCTGTACAAGCTCACGTACTCCACTGAAGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGAATCCTGATGGTGATGATGACCAGTTGATCCAAATAACGGT chr4 + 94230402 61645248 61645247 61645456 61645248 61645247 61645456 209 TGTTTTCCTTTTCAAACAGGGCACACTACTGGACCAAGCTTAAGTAATGACAGATTATATAGATTTGCTTACACTGCTGAAGTCTATGTTGATCGGGCTAAAGCATCCCTGCAGAAAAGTGCAGGCTACCGGTTTTCTGCTGGTGTAGATGTCAACCTCTTATGGAGAAATCCTGAAAATGATGATGACCAATTGATCAAAGTTATGGT ...:x.:x.:..:.x:....x.....x.....x.:xxxx....:.......x.::.:..:.:::.::.x...x.::.......::x.x.........x:....x.xxx.....::.x..:.::........xx....:x.::::..:.....x:x.:.x:.......:........x::............:......x..:.x.:... 209M 138/209 66.0% 209/94230402 0.0% 0/209 0.0% 37936638 NA +8224 chr4 + 190214555 99581886 99581885 99582094 209 TGTCATTATCTTTATGCAGGTCACACAACTGGTCTCTCATTAAATAATGACCGGCTGTACAAGCTCACGTACTCCACTGAAGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGAATCCTGATGGTGATGATGACCAGTTGATCCAAATAACGGT chr4 + 94230402 61633391 61633390 61633599 61633391 61633390 61633599 209 TGTTTTCCTTTTCAAACAGGGCACACTACTGGACCAAGCTTAAGTAATGACAGATTATATAGATTTGCTTACACTGCTGAAGTCTATGTTGATCGGGCTAAAGCATCCCTGCAGAAAAGTGCAGGCTACCGGTTTTCTGCTGGTGTAGATGTCAACCTCTTATGGAGAAATCCTGAAAATGATGATGACCAATTGATCAAAGTTATGGT ...:x.:x.:..:.x:....x.....x.....x.:xxxx....:.......x.::.:..:.:::.::.x...x.::.......::x.x.........x:....x.xxx.....::.x..:.::........xx....:x.::::..:.....x:x.:.x:.......:........x::............:......x..:.x.:... 209M 138/209 66.0% 209/94230402 0.0% 0/209 0.0% 37948495 NA +7049 chr4 + 190214555 99583340 99583339 99583521 182 GTTTTTTTTAACAGCTTTCTTT-CTGTTACT---CCAGATGAAGGATGTAAATGTTGAAAATGTGAATCAGCAGAGAGGAGAGAAGAGCATCTTCAAAGGAAAAAGCCCATCTAAAATAATGGGAAAGGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTTCATCTAATCCATGGAAAGGTAA chr4 + 94230402 61645871 61645870 61646056 61645871 61645870 61646056 186 GTTCTCTACATGAATTTTCTCTGCTTTTACTTTGCTAGATAAGAAATGTCCAAGTAGAAAATGTGAATGAACGTCCATCTGATAAAAGCATCTTCAAAGGAAAAAGCACAGAGAAAATCATCGGGAAAGAATATCTGGAAGCTCTACAGAGGCCCATGGTGCTTGAGTTAGCCCGTGGAAAGGTAA ...:.:.x:.xx.::.....:.-..x.....---.:....:.:::....xx.x..x............x.:.:xxx.xxx..x..:.....................x..xxx.....x..x..:..:...x.::..........:..:..:..:.:.x.x...x.x:..::..:........... 22M1I8M3I152M 128/182 70.3% 186/94230402 0.0% 4/182 2.2% 37937469 NA +7132 chr4 + 190214555 99583340 99583339 99583521 182 GTTTTTTTTAACAGCTTTCTTT-CTGTTACT---CCAGATGAAGGATGTAAATGTTGAAAATGTGAATCAGCAGAGAGGAGAGAAGAGCATCTTCAAAGGAAAAAGCCCATCTAAAATAATGGGAAAGGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTTCATCTAATCCATGGAAAGGTAA chr4 + 94230402 61634014 61634013 61634199 61634014 61634013 61634199 186 GTTCTCTACATGAATTTTCTCTGCTTTTACTTTGCTAGATAAGAAATGTCCAAGTAGAAAATGTGAATGAACGTCCAACTGATAAAAGCATCTTCAAAGGAAAAAGCACAGAGAAAATCATCGGGAAAGAATATCTGGAAGCTCTACAGAGGCCCATGGTGCTTGAGTTAGCCCGTGGAAAGGTAA ...:.:.x:.xx.::.....:.-..x.....---.:....:.:::....xx.x..x............x.:.:xxx.:xx..x..:.....................x..xxx.....x..x..:..:...x.::..........:..:..:..:.:.x.x...x.x:..::..:........... 22M1I8M3I152M 128/182 70.3% 186/94230402 0.0% 4/182 2.2% 37949326 NA +3015 chr4 + 190214555 99588940 99588939 99589001 62 TTCATATATATACACACATATATATGTTCATATATATACACACATATATATATGTTCATATA chr4 + 94230402 23402827 23402826 23402888 23402827 23402826 23402888 62 TTCATATGTATGCGAATATATATATGATCATATATATATACATTTTTACATTTAGTGAAATA .......:...:.:x.:.........x...........:...:x.x..:..x.:x.x.x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 76186113 NA +3074 chr4 + 190214555 99589020 99589019 99589073 54 TTCATATATATACACACATATATATGTTCATATATATATTCATATATATATATA chr4 + 94230402 23402827 23402826 23402880 23402827 23402826 23402880 54 TTCATATGTATGCGAATATATATATGATCATATATATATACATTTTTACATTTA .......:...:.:x.:.........x............x...x.x..:..x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 76186193 NA +5000 chr4 + 190214555 99589599 99589598 99589754 156 TGCATTTTTGCTTCATTTGTGTTCTGTTCCCCTCTCCCCACCAGGTCAAAGAGTTCTACTCATATCAAAATGAGGCAGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAGCCTATTTCAGACACAGTTAAGCTCTGGAACCACCAATGAGGTAC chr4 + 94230402 61648018 61648017 61648164 61648018 61648017 61648164 147 TGCATTTGTTACATACTTGTTTTTTATTCCTA---------CAGGTCCAAAACTTCTACTCATACGAAAATGAACCTGGTTTTACTCAAAATCTTAAGAGAGGCCTGGCTAGCCTTTTCCAGCTACAGATGCACTCTGGTAGTGTTCGAGAGGTAC .......x.xx:x:.:....x..:.:....:x---------......x..:.x...........:x.......:x.x.xxx::.:xx.....x.:........:...........x..:...x:....x.:x:......x.x::::x:x....... 32M9D115M 99/147 67.3% 147/94230402 0.0% 9/147 6.1% 37941581 NA +5000 chr4 + 190214555 99589599 99589598 99589754 156 TGCATTTTTGCTTCATTTGTGTTCTGTTCCCCTCTCCCCACCAGGTCAAAGAGTTCTACTCATATCAAAATGAGGCAGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAGCCTATTTCAGACACAGTTAAGCTCTGGAACCACCAATGAGGTAC chr4 + 94230402 61636162 61636161 61636308 61636162 61636161 61636308 147 TGCATTTGTTACATACTTGTTTTTTATTCCTA---------CAGGTCCAAAACTTCTACTCATACGAAAATGAACCTGGTTTTACTCAAAATCTTAAGAGAGGCCTGGCTAGCCTTTTCCAGCTACAGATGCACTCTGGTAGTGTTCGAGAGGTAC .......x.xx:x:.:....x..:.:....:x---------......x..:.x...........:x.......:x.x.xxx::.:xx.....x.:........:...........x..:...x:....x.:x:......x.x::::x:x....... 32M9D115M 99/147 67.3% 147/94230402 0.0% 9/147 6.1% 37953437 NA +3872 chr4 + 190214555 99589640 99589639 99589754 115 CAGGTCAAAGAGTTCTACTC---ATATCAAAATGAGGCAGTGGCCATA---GAAAATATCAAGAGAGGTCTGGCTAGCCTATTTCAGACACAGTTAAGCTCTGGAACCACCAATGAGGTAC chr4 + 94230402 61636833 61636832 61636951 61636833 61636832 61636951 119 CAGGTCCAAAACCTCTACTCTCTATACGAAGATGAACC--TGGTTTTACTCAAAAATCTTAAGAGAGGCCTGGCTAGCCTTTTCCAGCTACAGATGCACTCTGGTAGTGTTCGAGAGGTAC ......x..:.x:.......---...:x..:....:x.--...::x..---:.....x.:........:...........x..:...x:....x.:x:......x.x::::x:x....... 20M3I15M2D8M3I70M 80/113 70.8% 119/94230402 0.0% 8/113 7.1% 37952807 NA +7659 chr4 + 190214555 99597057 99597056 99597230 174 TGTTTTGCAGCTCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGCCTTCATTCAGCACCTCAGGACTGCGAAGAAAGAAGAGATCCTTCAAATACTAAAGATGGAAAATAAGGAAGTATTGTAAGT chr4 + 94230402 61656256 61656255 61656429 61656256 61656255 61656429 174 TATTTTGCAGCTTTCTGAACACTGGAAAAGCATCAAAGAACACATGCATCCTGAAAAACTATCCAAAGCTGAAGCAGCAAGAAGTTTTTTATCCTTCATTCAGAACATCAGAAAAGCTACAAAAGAGGAGATACTTCAGATTATTAAAACCGAAAATAAAGAACTCCTGTAAGT .:..........:..x..:.x....x::xx..:..:::..:..x....x.....x..x..x.....:.....:..x.:x....::..::.:x...........x..x....:.xx..x.x:.....:.....x.....:..xx.x..:.:x........:...x.x:....... 174M 122/174 70.1% 174/94230402 0.0% 0/174 0.0% 37940801 NA +10333 chr4 + 190214555 99600491 99600490 99600757 267 TCTGTGAATGGTAGAGATTTTTAAGTATTCCTTCCCCTAA-ACATTGATATCCATGATTATGCCTTTTTTTATAGACCTCAGCTGGTGGATGCTGTCACCTCTGCTCAGACCTCAGACTCATTAGAAGCCATTTTGGACTTTTTGGATTTCAAAAGTGACAGCAGCATTATCCTCCAGGAGAGGTTTCTCTATGCCTGTGGATTTGCTTCTCATCCCAATGAAGAACTCCTGAGAGCCCTCATTGTAAGTCAAATAG-AAAATAAAGAC chr4 + 94230402 61658676 61658675 61658942 61658676 61658675 61658942 267 TCCGTATGCAGCAAAGTCCTTTCAGTATTTTCTAGCTCATTACAATGATATGC-TAATT-TCCACATCTTTGTAGTCCACAGATAGTGGATGCCATAACCTCTGCGCAGACGCCAGCATCTCTAGAAGCCATACTGGAGTTTCTTGACTTTAAGGATGCAAGCACTTCTGTCCTGCAGGAGCGATTCCTATATGCCTGTGGATTTGCTTCTCATCCCAGTGAAATGCTCCTGAGATCTTTAACTGTAAGTCAAGTGTCAAAACAAATAC ..:..:x:::.:.:..x::...x......:::.xx.::.x-...x......x.-.:...-.x.x:x.:...:...x..x...x.:........::.x........x.....x:...xx..x:..........x:....x...:.x..:..:..:::..xx....x:x:.:....x......x.:..:..x............................:....:x:.........x.::.x.:..........:.:x-....:...x.. 40M1I12M1D5M1D197M1I11M 186/265 70.2% 267/94230402 0.0% 4/265 1.5% 37941815 NA +10333 chr4 + 190214555 99600491 99600490 99600757 267 TCTGTGAATGGTAGAGATTTTTAAGTATTCCTTCCCCTAA-ACATTGATATCCATGATTATGCCTTTTTTTATAGACCTCAGCTGGTGGATGCTGTCACCTCTGCTCAGACCTCAGACTCATTAGAAGCCATTTTGGACTTTTTGGATTTCAAAAGTGACAGCAGCATTATCCTCCAGGAGAGGTTTCTCTATGCCTGTGGATTTGCTTCTCATCCCAATGAAGAACTCCTGAGAGCCCTCATTGTAAGTCAAATAG-AAAATAAAGAC chr4 + 94230402 61657220 61657219 61657486 61657220 61657219 61657486 267 TCCGTATGCAGCAAAGTCCTTTCAGTATTTTCTAGCTCATTACAATGATATGC-TAATT-TCCACATCTTTGTAGTCCACAGATAGTGGATGCCATAACCTCTGCGCAGACGCCAGCATCTCTAGAAGCCATACTGGAGTTTCTTGACTTTAAGGATGCAAGCACTTCTGTCCTGCAGGAGCGATTCCTATATGCCTGTGGATTTGCTTCTCATCCCAGTGAAATGCTCCTGAGATCTTTAACTGTAAGTCAAGTGTCAAAACAAATAC ..:..:x:::.:.:..x::...x......:::.xx.::.x-...x......x.-.:...-.x.x:x.:...:...x..x...x.:........::.x........x.....x:...xx..x:..........x:....x...:.x..:..:..:::..xx....x:x:.:....x......x.:..:..x............................:....:x:.........x.::.x.:..........:.:x-....:...x.. 40M1I12M1D5M1D197M1I11M 186/265 70.2% 267/94230402 0.0% 4/265 1.5% 37943271 NA +13267 chr4 + 190214555 99608763 99608762 99608989 227 CAGGTGAAGAAGACCTTAAACAGAATATACCACCAAAACCGTAAAGTTCATGAAAAGACTGTGCGCACTGCTGCAGCTGCTATCATTTTAAATAACAATCCATCCTACATGGACGTCAAGAACATCCTGCTGTCTATTGGGGAGCTTCCCCAAGAAATGAATAAATACATGCTCGCCATTGTTCAAGACATCCTACGTTTTGAAATGCCTGCAAGGTATAATACATT chr4 + 94230402 61661165 61661164 61661391 61661165 61661164 61661391 227 CAGGTGAAGAAAACAATGAATAGGATATACCACCAGAATCGTAAAGTCCATGAAAAGACAGTGCGAACCACTGCAGCTGCTATCATCTTGAACAGTAACCCATCCTACATGGAAGTGAAAAACATCCTGCTCTCCATAGGTGAACTGCCTCTGGAAATGAACAAGTACATGCTCTCCATAATCCAAGATATACTTCAGCTTGAAAAGCCTTCTAGGTACATGAAATT ...........:..xx.:..:..:...........:..:........:...........x.....x..::................:..:..:.::..:..............x..x..:...........x..:..x..x..:..x..:.x:........:..:.........x....x:.:.....:..x..x.:x:......x....x.x.....:.xx.x... 227M 177/227 78.0% 227/94230402 0.0% 0/227 0.0% 37947598 NA +11183 chr4 + 190214555 99611134 99611133 99611458 325 ATGTTGCAGCAAAATTGTCCGTCGAGTTCTGAAGGAAATGGTCGCTCACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTTCTGCCTACACTGGCTACATAGAACGTATGTACACCAAAAAGAGGTT--------CTCCTTCCATACCCCACAACTTAGCATTGCTGGAACTGCTA-TTAAATTACAGTTATTGTGTGTCATC--------AGGTAGTCCCCGTTCGGCATCTACTTACAGCCTAGACATTCTCTACTCGGGTTCTGGCATTCTAAGGAGAAGTAACCTGAACATCTTTCAGTACATTGGGAAGGCTGGTCTTCACGGTAGCCAGGTAAC chr4 + 94230402 61662029 61662028 61662363 61662029 61662028 61662363 335 ATACCACAGCAAAACAGTTCGGAAAGTTCTGAAGGACATGCGTGCTCATAACTACGAGCGCTTCTCCAAGCCAGGATCTTCTTCTGCTTACTCTGGCTATATTACACGTATGTA-ACCAGGAAACTGCTTTATAACCCTGCTTTTATTCCCCAACAT------CTGATTAATTCACTAGTTTAGTCACAGGTAGCTTCTTTCTTTTTTAATTAAGGTGGTCCTGATATATCATCCACGTACGGCCTAGACATCCTCTATTCAGGCTCTGGCATTTTAAGAAGAAGCAACTTGAACATCCATGTTTTTGACAGAAATGCTCAACTTCATGCTGGCCAGGTAAC ..::::........:x..:..xx:............x...xx:.....:..:..:..x..:.......:.xxx..............:...x.......:..x:x.........-....::..:xx.:.--------..x...::..x.....xx.:------:..x.x:.x:::...-..x.:.:....x..x:x.x.x..x.:--------....:....:x:.x::x....:..x...:..........:.....:..:..:.........:....:.....:...:........:x.xxx.x::x::.:..x...x:x.....:.x.:.......... 114M1D14M8I20M6D15M1I26M8I129M 219/318 68.9% 335/94230402 0.0% 24/318 7.5% 37949105 NA +14044 chr4 + 190214555 99612643 99612642 99613143 501 GAGTAAACTTG----AAAACTTTTTTTGCCTCATCTACAAAATGGGTAATATCATATGTACTTCAAAGAGTGGTTGTGAGGATTCAATGAAAAACTAACCCACCTTATATTCAGGCACAGAGGTTTTTGTCTGTTTTAGTTTTTGTTTTTAGCTGTTGCAAATATTTAAGTTTTTGGCCCCTTGAG------------AAGTTCTAG-CTGCAGCTCAG-------AAGCTTCACCATTA----TTTACAGAGCAGGCAGGG--------AGCTTGCGTCATGAACATTAT----ATTGATTTTATCC--------------AGGTGGTTATTGAAGCCCAAGGACTGGAAGCCTTAATCGCAGCCACCCCTGACGAGGGGGAGGAGAACCTTGACTCCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTCAGCTCAGACCTGTCACCTTTTTCAACGGATACAGTGATTTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCTATCAGTGTGGTGAAAGGACTTATTCTGCTAATAGATCATTCTCAGGTA chr4 + 94230402 61662780 61662779 61663294 61662780 61662779 61663294 515 GAGGAAAATTGCACCAAAAATCTTTGTG-----TCTATGGAATGTGTA---------------TGGAGAATGGTCATGTGGA---AAGGAAAAGTAAGCTTG---TGCTTGTAGGCAAAGTGAAATTATTCTATTTTCATTTTT---TCTAGTTGCTACA-----------CCTTGTTCCCTTGAGTCATAACCTCATAATTTTTAATCTACAACTAAATAAATTAGAGTTAGGCTTTTAGACATTAAGAAAACATGTATGGTTGTTATTAGCCTGTGTTAGGCAGAGTGTTTTCATTGATTCTGCACCACTGTTACTTCTTAGGTGGTGATTGAAGCTCAAGGTCTAGAGTCCATAATAGCTGCAACTCCTGATGAAGGCGAGGAAAACCTGGACTCCTTTGCTGGCATGTCAGCCATTCTGTTTGATGTCCAACTCAGGCCAGTTACATTTTTCCAAGGCTATGGTGATTTAATGTCTAAAATGCTCTCAGCAACTGGAGATCCCATTAGCGTCGTGAAAGGACTTATCCTCCTGACTGACTACTCACAGGTA ...x...x...----....x.:...x..-----....:::....x...---------------:::...:....::..x...---..x.....::x.:.:::---.::x.x:.....x..x.:xx..xx...:....x:.....---.:...:..:.:..-----------::...x:........------------..x..:..:-..:..:..x.:-------:..:.xx:.:x...----..x.x.:.:..x.:.x..--------...:..:..:.x.x.x.x.:.----.......:.::x.--------------.......x........:.....x..:..:x..x....x..x..x..:.....:..:..x.....:.....x.......x......:...........:..x........:..:.....:..x..:..x......x.x..x..::.......:.....:........x......x....x..:..:..:..:..x..............:..x..:.:x..::.:..x...... 11M4I13M5D15M15D19M3D17M3D39M3D13M11D15M12I9M1I11M7I14M4I18M8I21M4I13M14I233M 331/461 71.8% 515/94230402 0.0% 94/461 20.4% 37949863 NA +3077 chr4 + 190214555 99615993 99615992 99616046 54 TCTCTTTTTTTTTCCTTTTTTGCAATATTTCTTAGAACAGGCTTTCTTGTACAC chr4 + 94230402 12629243 12629242 12629296 12629243 12629242 12629296 54 TCCCTTTTTTTTTTTTTTTTTGCAACATCTCCTAAGACATGTTTTCAGGAACAC ..:..........::..........:..:..:..::...x.:....xx.x.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 86986750 NA +8860 chr4 + 190214555 99621053 99621052 99621237 185 ATGTTTAGGGTGACTGTGGTAATAACCACTGACATCACAGTGGACTCCTCTTTTGTGAAAGCTGGCCTGGAAACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATCTCCACAGTGCAGTTTTCTCAGTACCCATTCTTAGTTTGCATGCAGATGGACAAGGATGAAGCTCCATTCAGGTAAGA chr4 + 94230402 61672505 61672504 61672689 61672505 61672504 61672689 185 ATTTGCAGGATAGCCATGTTTGTAGCTGGTAATGCTGAGGTGGATTCCTTCTTTCTAAAAACTGGTATGGAAACCACTCTGGAAATCGAAACAGCATTAGACTTTATCTCCACGGTGCAGTTTTCACAGTACCCCTTCCTAGTCTGTATGCAGATGGACAGAGTTGGCTCTCCTTTCAGGTAAGA ..x.x:...:.::.::..x.x:..:.::x.:.:::::x:.....:....::...x.:...:....:x.........x.x::....:x...:...xx..:..x...........:...........x........x...:....:..:.............::.x..:xx....x........... 185M 130/185 70.3% 185/94230402 0.0% 0/185 0.0% 37948548 NA +8991 chr4 + 190214555 99621053 99621052 99621237 185 ATGTTTAGGGTGACTGTGGTAATAACCACTGACATCACAGTGGACTCCTCTTTTGTGAAAGCTGGCCTGGAAACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATCTCCACAGTGCAGTTTTCTCAGTACCCATTCTTAGTTTGCATGCAGATGGACAAGGATGAAGCTCCATTCAGGTAAGA chr4 + 94230402 61668171 61668170 61668355 61668171 61668170 61668355 185 ATTTGCAGGATAGCCATGTTTGTAGCCGGTAATGCTGAGGTGGATTCCTTCTTTCTAAAAACTGGTATGGAAACCACTCTGGAAATCGAAACAGCATTAGACTTTATCTCCACGGTGCAGTTTTCACAGTACCCCTTCCTAGTCTGTATGCAGATGGACAGAGTTGGCTCTCCTTTCAGGTAAGA ..x.x:...:.::.::..x.x:..:..:x.:.:::::x:.....:....::...x.:...:....:x.........x.x::....:x...:...xx..:..x...........:...........x........x...:....:..:.............::.x..:xx....x........... 185M 131/185 70.8% 185/94230402 0.0% 0/185 0.0% 37952882 NA +6963 chr4 + 190214555 99622673 99622672 99622974 302 ACAGGCAATTTGAGAAAAAGTACGAAAGGCTGTCCACAGGCAGAGGTTATGTCTCTCAGAAAAGAAAAGAAAGCGTATTAGCAGGATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTCCAGCGGATGGTTTTGAAACTG---------ACCTGTGATATTTT---------------------ACTTGAATTTGTCTCCCCGAAA-------GGGACACAATGTGGCATGACTAAGT----------ACTTGCTCTC------------------------------TGAGAGCACAGCGTTTACATATTTACCTGTATTTAAGATTTTTGTAAAAA chr4 + 94230402 61673599 61673598 61673974 61673599 61673598 61673974 376 ACAGGCATTCCGTGACCAAGTATGAAAGCCTACCCTCTGGCAGACGGTACACTGCGAGGAGAGGGAAAGCAGAAATGTTGGAAGGTTGTGAATACCCTCTCCATCAAGAAAACTCCAACATGTGCAGGAAGGTTTTCAGCACTGCATCTGA---TTCCTCAGGCAGCTGGTTTTGAAACAGGCACCTTGCACTTTTGGTGTCCTGAATCCATGGCTCACTCGATGACTTAGGCTTGTATGTACCGAACTAACTTGGAGCTTGATCTTGCACTACTGCGGGTAATGGGAAATTTGCCATTGATTTCAACAGGCCAGGATCAGACTCCCAGTGTGTGCACAGTGTTTACATAATAACCTGTATTTAAGACTTTTGTAAAAA .......x.::.x..xx.....:.....x..::..x.x......x.x..::::x.xx:..:.:.:....x.::x:.:..:.x...x.......x...x...........:.....x:.x.......:::x...x..::x.x..xx::.x..---.x.:..x:..:.x............x.---------..:.x..:.:.::.---------------------....::::....x.x:x.x:..-------..::.x::..x.x...:x...:x.x----------.:....:x.:------------------------------..x.x......:.........x.x..............:........... 151M3D27M9I14M21I22M7I25M10I10M30I50M 200/299 66.9% 376/94230402 0.0% 80/299 26.8% 37949074 NA +3378 chr4 + 190214555 99627201 99627200 99627257 57 TTTTCTTTTTTGTTTGTTTGTTCTTTTGGTGTCATATCTAAGAAACCATTGCCAAAT chr4 + 94230402 22156821 22156820 22156877 22156821 22156820 22156877 57 TTTTTTTTTTTGTTTGTTTGTTCTTTTAAAGTCACCTTTGACACACTATTGCCACAT ....:......................::x....:x.:.:.x.x..:.......x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 77470380 NA +3163 chr4 + 190214555 99631649 99631648 99631702 54 AGTGAGACTCCGTCAAAAAAAGAAAAAAACAAAACAACAACAACAAAAAAAACA chr4 + 94230402 21191182 21191181 21191235 21191182 21191181 21191235 54 AGTGGAACTCCCTGATCATTAAAAAAAAACAAAACAACAACAACAAAAAAACCA ....::.....x.x.xx.xx.:.............................x.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 78440467 NA +3019 chr4 + 190214555 99631651 99631650 99631698 48 TGAGACTCCGTCAAAAAAAGAAAAAAACAAAACAACAACAACAAAAAA chr4 + 94230402 27325815 27325814 27325861 27325815 27325814 27325861 47 TGAAGCCTCCTCAAAAAAC-AAAAAAACAAAACAACAACAACAAAAAA ...::.::.x........x-............................ 19M1D28M 41/47 87.2% 47/94230402 0.0% 1/47 2.1% 72305836 NA +3404 chr4 + 190214555 99647976 99647975 99648081 106 AGAGAAGAGAGAAATAACATATTTTTT--ATTATAGAAGCATAAATAGGATTTCTCTTCTTTCCATCTCTTTTTTTTTCTTTTTTTTTTTTGGTTCAGAATATGATCT chr4 + 94230402 57205834 57205833 57205941 57205834 57205833 57205941 108 AGGAAAAAGAAGGAAAACCTATTTCTGTGAGCGTATGAACATATATGAACATTTTCGTGTTTCTTTTTCTTTTCTTTCATTTTTTTTTTTAAATTCAGGTTATAATTT ..::..:...:::.x...x.....:.x--.x::..x:.:....x..:::xx..:..x.x....:x.:......:...:x...........x::.....:x...:..:. 27M2I79M 68/106 64.2% 108/94230402 0.0% 2/106 1.9% 42442142 NA +19693 chr4 + 190214555 99652963 99652962 99653581 619 GTGTTCAGCAGCTGTAGAGACGCGGAGGCTCATGTCGCCTTCATGCTTGGCAGCATAAATAATGTTTTGCTTTGCACGCACGTTGCTAGGCTCATTTATAGCCCGGGAAGCCGGTTTGATTGATAGGAGGATCTGGCTTGCTGCACTCCCACAGCTGCTTGCGGCGGCGGCTGCTGCCCCTGAAGCTGCCTCCGGGGTCTCAGGCAAGGGCTCAGTCAGGGGGGCAGTGCCAGGCCCAGTGGGTGGGGGAGTGGGGCCACTGTCAGAGGGGCCACTGCCCACTTCGGTGCTGCTGGTGTCGCGGCCACTGCGGCCTGCATTGGGGCGGGCCAGGTCGCTGCTTGTAGGGCTGGGCGTCCGGGTGGTGTTGGTGCTGGGAGTGGTGCTGAGGTAGCAGCTGTTGTCGTCGTCCTCTTCGGTCAGACTGGTGATGTCCCCTGGGGTCTCGTCGCTGCCACCAAAGGAAGCATAATCCACGAACGAGTAGATCACGTTGTTGTCCTCGAAATCCCAGCGGGAGGCCAGTCCCACGTCGAAATCCATGTCCTGTTCCACCTCACTCAGCTGGATCTCATGGGTGGTGATGTAGTGAGCCTCTTCGACTTTGGGGGGGTCCCTG chr4 + 94230402 61685977 61685976 61686454 61685977 61685976 61686454 478 gcgctccggggccgcggcgACGCGGAGGCTCATGTCGCCTTCATGCTCGGCGGCGTAGATTGCGTCGCGCTCTTCCCGCGCGGCGCTACACTCATTTATAGCCCGCGAGGCCGCTTTGATTGATAGGAGGATGTGGCCCGCGGGGCTC---------------------GCTCCCGC----------GCCTCCGGGCCGCC-----------------------------------------------GAGGCGCGTCGCTGCCCGAGCTGCCGCCCGCCGCCTCGCTGCCGCTG------------------CCCGC------------------------------GCTGTCCGCCCGCGCCGTGCGCTCGCTGGGCGTCGTGCTGAGGTAGCAGCTGTTGTC------CTCCTCCGTC------GCCGTGTCGCCGGGGGTCTCGTCGCTGCCG---AAGGAGGCGTAGTCCACGAAGGAGTAGATCACGTTGTCGTCCTCGAAGTCCCAGCGGGCGGCCAACCCCGCGTCGAAGTCCATGTCGTGGTCCACTTCGCTCAGCTGGATCTCCTGCGTGCTGATGTAGTgcggccccgccgcgccgggcgcgcccccg .:.:..x.x:..:.::.x.............................:...:..:..:..x::..:x:...:.x.x...:..x:....x:...............x..:....x..................x....::..x.x:...---------------------...x.:..----------.........x:x:.-----------------------------------------------...xx.x.:.:...:.x...xx...:.:xx..:.:...x...:....------------------..:..------------------------------....xx..:...x.:x...:xxx:......x..x.......................------...:..x...------.:x:....x..x.................:---.....:..:..:........x................:.........:..........x.....::...:.......:........x..x.....:..:..............x..x...x..........x.x.:.:x.x:.x::...x.x.:...:. 148M21D8M10D14M47D47M18D5M30D57M6D10M6D30M3D159M 365/478 76.4% 478/94230402 0.0% 141/478 29.5% 37966986 NA +3196 chr4 + 190214555 99667941 99667940 99667991 51 TTTACACACACATACACACACACACACATATATATATATATATATATATTT chr4 + 94230402 74526075 74526074 74526125 74526075 74526074 74526125 51 TCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTT .::.........:...::x...:.....x.......::.......:..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 25141866 NA +5879 chr4 + 190214555 99679375 99679374 99679647 273 TCTGCAGAATCAAATGAAAATCAATCCCTTTTTAT---GCAAACCTTCCTGAAACAGCAAGGCTATGTTTGGTCACAAGGGCGGAGGTTCGTGCAGTGGAAGCCCTGGTGGTGATTTCTCCCAGCTC--------AGGGCTTGCCAAAGTCGTCTCCACCTCATAGTGATGAAAGGCTGGATCAAATGGCTCTCAAAGC-CAACTTCTATTAGACTTGCCTTTTCTAAAAATAGTGCACTTCAGTAAACACCATTGTGA---GTTTGCAGTTTACTTGCTGGGGAGTA chr4 + 94230402 61694615 61694614 61694896 61694615 61694614 61694896 282 TTCGGAGGGGCAGGCGAAAAGCAATCCGCGTTGATCGTGCCCACCTCCT---GCCAGGGGGCCTATGTTTGGACATG-GAGCCATGGGCCGTGCAGCATGCAGCCCGGGGGTG-TTTCTCCCTGGGCTTACAGTAAAAGCCAGCTCAAGTGCCTGCCACCACATGGTGATGAAAAGGAGGATCAAACAGCTCCCAGAGCAAAACCTCTTCCATGCTGG-AGTTTCTATATATAGGGGAGTTCAATAAACACCATTACGAACTGTGTGCAATCTGCCTGTCCAGAATTA .::.x..::x..:::.....x......x:x..x..---..xx....:.:---:x...x::.x..........x..::-.:..x:x..x:.......::x:x:x..:..x....-........x.xx.--------.::..:x..:x....xx::x.....x...:.........:.xx........::....:..:...-x...:...x::.x:..x.-xx......x.x....x.x.x....:...........::..---..x....:.:.:.:..::x:.:.x.. 35M3I11M3D25M1D35M1D13M8I64M1I18M1D40M3I26M 173/267 64.8% 282/94230402 0.0% 21/267 7.9% 37984760 NA +3516 chr4 + 190214555 99717390 99717389 99717462 73 TGCACCTATAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGGATCACTTGAGCCCAGGGGTTTGAGGCAGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:....:.........::::..:.....x.xx.x.:.x.......:.....::.:..x:...x.:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 23684185 NA +3163 chr4 + 190214555 99719909 99719908 99719960 52 GAAGAGGCAAAAAGCAGTGCAAGAGAAAACACACACACACACACACACACAC chr4 + 94230402 1607771 1607770 1607822 1607771 1607770 1607822 52 GATGAGGCACAAAAGACTGCAGGAACAAACACCCGCACACACACACACACAC ..x......x...:x.x....:..:x......x.:................. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 98112138 92102417 +3271 chr4 + 190214555 99741215 99741214 99741291 77 AGTGG-GTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTCAACTCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....-.::.x....:.:.......:...::........x.xx.x...x.....x...:...:..x:xx:.....:.. 5M1I72M 55/77 71.4% 78/94230402 0.0% 1/77 1.3% 23708015 NA +3382 chr4 + 190214555 99772660 99772659 99772733 74 GTGTGCCTATAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.:................::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 23739456 NA +3473 chr4 + 190214555 99776268 99776267 99776350 83 CATGGTGGCGCGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGCAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:..::.--.:....:...........::........x.xx:x...x...........:x...x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 23743071 NA +3027 chr4 + 190214555 99810334 99810333 99810392 59 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGGGAATAAAGAAACAATGATAATGA chr4 + 94230402 41664461 41664460 41664519 41664461 41664460 41664519 59 AACACAAAAAGAGGAAAAAAAGGAAAGAAAGGAAGCGAATAAAGATATAACTGCAATAA ..x.x.....:.::.......::........:...x.........x.:..:x::...:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 58145873 NA +3100 chr4 + 190214555 99827397 99827396 99827462 66 GTGGTGGGCACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.::........x.xx.x...xx:.x.......:.:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 23794196 NA +3111 chr4 + 190214555 99827532 99827531 99827569 38 CAAAAAAAAAACAACAAAAAAACAAAACAAAAAACACC chr4 + 94230402 7417650 7417649 7417687 7417650 7417649 7417687 38 CAAAAAAAAAAAAACAAAAAAACAAAACAACAAACACC ...........x..................x....... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 92409882 NA +3475 chr4 + 190214555 99829344 99829343 99829422 79 GTGGTGCACACCTGTAGTCCCACCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...x.....:::.........x.xx.x...x::.........:.:..x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 23796143 NA +9311 chr4 + 190214555 99840272 99840271 99840427 156 TTCTTTTTCCCTTTTAGGGCCAAAGATTCTGTTAAACACTTTCATGTTGAATATACTGGATATTCATTTAAATTTGGCTTTAATGAATTCTCATCTTTGAAGGATTTTGTCAAGCATTTTGCAAATCAGCCTTTGATTGGAAGCGAGACAGGTAAG chr4 + 94230402 61741332 61741331 61741487 61741332 61741331 61741487 156 TTCCTTCTTTGCTGCAGGGGAAAAGATTCTGTGAAACATTTTCATGTTGAATATACAGGAACCTCACTCAAATTTGGATTTAACGAATTTTCCAGCTTGAAGGAATTAGTCATGCATTTTGCAAATCAACCTTTAATTGGAAGTGAAACAGGTAAG ...:..:.::x:.x:....xx...........x.....:.................x...xx:...:.:........x.....:.....:..xxx:........x..x....x...............:.....:........:..:......... 156M 124/156 79.5% 156/94230402 0.0% 0/156 0.0% 38098940 NA +8821 chr4 + 190214555 99853145 99853144 99853361 217 CAGTTA-TCCAGTTAGCATTTGGACCTTCCTTCTGGGAACACTGTTCGATTATATATTTTTCATCTTCATTCAGGCACTCTGATGGTTCTAAAACATCCCTACCCAAGAAAAGTGGAAGAACCCTCCATTTATGAATCTGTCCGGGTTCACACAGCAATGCAGACAGGAAGAACAGAAGATGACCTTGTGCCCACAGCACCTTCTGTAAGTGACCTTC chr4 + 94230402 61744872 61744871 61745082 61744872 61744871 61745082 211 CAGCTACTTCAATTACTTTCTGAGACTGCCTT---GACATATTACTCACTCCTGCTCTTTTTCTCTCCA----GGAACCTTAATTGTATTGAAGCATCCCTATCCACACAAAGTGGAGGAGCCATCTATTTATGAGTCTGTCCGAGTTCACACAGCAATGCAGACAGGAAGGACAGAAAATGATCTTGTTCCAAATGCTCCCTCAGTAAGTTCCTCTC ...:..-.:..:...x:x.:..::x..x....---.:x.:.:.::..:x.:x.::x:....:x...:..----..x..::.:..x..x:.:..:........:...x:x........:..:..x..:........:........:..........................:......:....:.....x..x.xx..x..:..x......xx.::.. 6M1I25M3D34M4D145M 149/210 71.0% 211/94230402 0.0% 8/210 3.8% 38108273 NA +3200 chr4 + 190214555 99853679 99853678 99853761 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGTGGAAGGATTACTTGAGTCAAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::.....:..x:xx:x.:.x:......::.x..:..x..x:.....:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 23820482 NA +5538 chr4 + 190214555 99863002 99863001 99863082 81 TTTCTCAGACCTGGAAAACAAGATGGTTTACTCTGCACAGGAATGAACTGAAATACTTCAAAGACCAGATGGTGAGAAACA chr4 + 94230402 61746875 61746874 61746955 61746875 61746874 61746955 81 TCTTTCAGAACTGGAAGACAAGGTGGTTTACACTGCATAGGAATGAACTTAAATATTTCAAAGACCAGACAGTAAGTAGCA .:.:.....x......:.....:........x.....:...........x.....:.............::..:..x.:.. 81M 67/81 82.7% 81/94230402 0.0% 0/81 0.0% 38116127 NA +3060 chr4 + 190214555 99866737 99866736 99866794 58 TTAAAAACTTTGATGATTTCTTTTTTTCTATTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 + 94230402 78319050 78319049 78319107 78319050 78319049 78319107 58 TTAAGAACACTTATGATCTACATTTTTCCATTTTTCTTTTTTTTTTTTCTGAAGATGG ....:...x:.x.....:.x:x......:......:............:.x:...::. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 21547687 NA +5553 chr4 + 190214555 99881908 99881907 99882127 220 AAAAGTATTATTGTAGTCTAAAGATTGCTGGATTGATATTGTGTTGTTATAATGAAGATAAGGTACACACTGAAACC--ACTGTCAGATTAAGAAACTTCCACAACTTGTCTCAGTTCTTCAAACAATGGAGCAAGTTCCTTTTCTAGGCTGACAATTAGTCCTAAAATA----AAGAGATTAAG-------AAAATTACATGTTAGAAAAATG-TTCCTCAAAGCCTGAAACT chr4 + 94230402 61754357 61754356 61754586 61754357 61754356 61754586 230 AGACGTGTTACTGGA--CTGAGGATTATTGAATCT-TCCTGT-CCATTGGGCTGCAGATGGACGCCGCACTCCAACTGTACCATCAGGTTAAGAAACTTCAACAACCTGCCTTAGTTCTTCAAACAGGGGTGTGAGCTCCTTCTCTAAACTTACGATCAGCCCTAGGAAGAGACAAGAGATGGAACAACCATCAAACAGCGTACCAGAGAAGCACTTTTCCAAAACCTGCAGCT .:.x..:...:..x.--..:.:....::..:..:x-.x:...-:::..:x:x..x....:::xxx.:....xx...:--..::....:............x.....:..:..:.............:x..x.::..:.....:....::..x..:..:..:....::.x:----.......x:.:-------x...:x:.:.:::...:..:::-..:::....:....x.:.. 15M2D18M1D6M1D34M2I91M4I11M7I22M1I19M 139/216 64.4% 230/94230402 0.0% 18/216 8.3% 38127551 NA +6086 chr4 + 190214555 99883979 99883978 99884137 159 ATTCCTCTTAAATTAAGGTATGGTAATTAAATT--AATTTTTTAAAAT---TAAGGATTAAAGTG------ATATTTAAGGTCATT---AAACACACCTGTATTGGCACTGCTGCTGGCTATGAAACTCACCACCAAAGGTAAACGATTAAATTGAACCACCTAAAAAGAAAA chr4 + 94230402 61755104 61755103 61755276 61755104 61755103 61755276 173 ATACACCTTGAAGAAAACTCTGGTAATTTACTTTCAAATATTTAAAACACCTGGGGCTTAAAATACTGCAAACATTTAAAACCACCTGAAGACGTACCAGTGTTGGCATTGCTGCTAGCAATGAAGCTCACCACCAAAGGTAAGCGATTGAACTGCACCACCTGCAAGAGAGA ..x.x:...:..xx..:x.x........x.x..--..x.x.......:---.::..x.....:.:------.:......:::..::---.:..::...x..:......:.......:..x.....:.................:.....:..:..x.......:x..:::.:. 33M2I13M3I14M6I15M3I84M 115/159 72.3% 173/94230402 0.0% 14/159 8.8% 38128875 NA +3641 chr4 + 190214555 99884829 99884828 99884907 79 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGTGAGAATCACTTGAACCTGAGAGGCGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:...........::........x.x..x...x..........::::..x:xx:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 23851628 NA +9870 chr4 + 190214555 99885536 99885535 99885681 146 ACTTACCTGGTAGGTGTTATAGTAACAGATGATACTTTTATTTTTGGAAAGTCCAAGTTTGCTTCCTTGGTCTGTTGCAAGGGCAAAAGTGGATAAGAAACCAGGTCGCAAAGCATGCTCTGGAGCATTGTCATTTGCCACTAGAA chr4 + 94230402 61756200 61756199 61756345 61756200 61756199 61756345 146 ACTCACCTGGTATGTGTTATAGTAACAGATGATACTTTTGTTCTTGGAAAGTCCCAACTTACTGCCCTGATCCGTTGCAAGGGCAAACGTGGACAGAAAGCCAGGTCGCAGGGCATGTTCTGGTGCGTTATCGTTGGCAACTGGAA ...:........x..........................:..:...........x.::..:..x..:..:..:..............x.....:.::..:..........::.....:.....x..:..:..:..x..x...:... 146M 119/146 81.5% 146/94230402 0.0% 0/146 0.0% 38129336 NA +22230 chr4 + 190214555 99900228 99900227 99901169 942 AGTATTGGAATTTTAAATGACATAACTGCACTTTACTGTTGAAGACCCTTTTAGTTTAATATTTATAGCCATTTCCTCA-------------------TATTTTCTTT-AAAATTTATCAGTATAGCATTTCATTT-CTATGCATGTATATGTATAGTAATTCATAAAACTA-AATAGCAAACTGATATTCTACACCAGTTCATTTA-TCTCAATATATATTTTGGAATATAACGGCAATAT---TAAAAATATCAATTCCCTCTAAGCTGATAATACTATAAGATTTTACACAAAGTTAAAGTTTTTGTTTTTTCTTTTTGAAAAAGTTTCATTGTTTAAAGTCCACATATTTGACACCTTGATAAGGAAAATGTAAATGTGTCATATAACATTTATTCCATCAATTTAAACTGAAGTGTCTCATGGAGCTAAACACTAAAAGAATTTAAATAAAAAAGCAGT-AACCTGTATGTACACAAAATGATCATTCCATAAATATTTACATGACAAGGGAAAAAATGGAGAATCACTAAAACTGGAAATTGCTACAGGTGTGATAATCCTTTCTCA-----TGACACTTTAGTTAGGAATCATGTAAGCTTT----TAAAATGAAAATACTTGTAGAAGCGTTAACTAAAATATTCCATTTTAGTTTTCAGTTACTATTTAAAGGAGCCAGTAGGTCATAAA-CAGTCCAAGATTTCAGGAACCAACTATTCAGTTTAGTTTTCAGTATCAAATCTTTTCCTTCATCCCTCATGATGAAACCAAACTT-------ACTTACAGAAAAAATAA-AGAGTACGCTAAAAGGTATAAATAAAAATTCCAGTTCATCCTCCTTTATAAAGACTGGTAAGCCGCTCTAATTCTTTACAGTTGTCCATGCTCAAGGCATCTGCCTTCCTTCGGAGTCGATCATCACGGTATACTTTTGCTGCATACTGCATATCTGTTTCTGTTAATAAAGAAAAA chr4 + 94230402 61758255 61758254 61759179 61758255 61758254 61759179 925 AGTACTGGAATACCGAATGATAGAGCTGCTGTAAACTGCTGCAAGTACTAAAAGC--AATGCTTACAATGGTTGATACAGAATTTGCAAATCATAGAATATTTACTTGGAAAAGAGGTTAGTGTAGTTCTTAGTTTTCTCAGCAT---TGCTTAGAAACACTAAAAAAACTACAACAGCTGACTGCTACTCTACACCAGATCAATGAGTCCCAACAGATAATTAGGAATGTA-TGCCATTATATTTAAAAATACCAAGTTCCTCTAAGCTGGCAGGCCTAGAAGATTTTACATAGAGTTAGAGATAAAATATT---------AAAAACTCTC---GTTTCAACTCCACACACGTGACATCTGAATAGGAGTGATGTAATT-------ATACTATTTATTCCATCAGT--GAGACAAAATGTTGTATGGAACTAAATTTCTGAGATTTTTAAATAGAAAGTCATTTAACTCGTATATACACAAAATGTTCTTTCCACAGATATTTACATGGCAAATATGTTAGAGGAGAACCACTATGACT--AAGTTTCTACAAGTATAGCA-TCCTTTCTAAGCTATTCTCTCTGCTGAAAGAATTCACAGAAGCTTCGAAGTAAAATCTAGACAATT-----AAAGTTACCTA---TATTTCACAGTAGGT--------------AAAGAAGCCATTACATGATATTTCAGCTTAAGGTTTCTGGAAACAGCTACACAGTAGAGTTTT--ACATCCACCCCTCTTTTCCAGCATTCATGGTGAAACTAAATCTCTTCTTAATTTACAAGAGAGATAATGGCATACGA-AAGACGTATAGCTG-------TAGTTCATCCTCCTCGATAGAGGCTGGTCAAACGTTCCAGTTCTTTGCAGTTTTCCATGGACATGGAGTCTGCCTTCTTTCGGAACCGATCATCTCGATAAACTTTCGATGCATGAAGTAACTCTGTTTCTTTGTGGGAAAAAAAA ....:......x:::.....:.x.:....xx.xx....:..x.:::x..xxx..:--...::...:.::x:..xx:x..-------------------.....x...x-....xxx:.:...:...:x:..x:...-..xx....---.::x..x.:xx.:.x.x.......-..:...x:....x..:..........x...x.x.-..:...:.x...x..x.....:..-:.x..x...---........:...x.:...........::.:xx...x...........:.:.....:..x.xxx:.x..---------.....x.:..---....x..x......:.:x.....:..x:...:.::x:......x.-------...x:.............:.--:.:x::..:...:x:.....:.....:x::x:.::xx........:...:x..x.-...::....:...........x..x.....:.:...........:...:x:x:xx.:x......:.....x:...--..:..x.....:..:.:::.-........x.-----.xx.x..x:x.xx..:.x...::x......:----......xx.:.:.x..-----.:x....x...---....:..:xx...x.--------------....:.....x..x:.x...xx-...:::...:....x....x..:...:x....xx......--::...x.x:.:.:.::.:..x.x:.....:......:...::.-------.:.....::.:.:....-:.x:....x-..:.x.....:x.:-------:.............:x...:..:.....x.:x..:..:.:......:.....x......xx..x..x:.........:......::........x..:..x.....:.x.....:xx.:.xx.........x.xx:x:..:..... 55M2D22M19I10M1I27M1I8M3D24M1I34M1I24M1D9M3I68M9D10M3D45M7D20M2D55M1I75M2D20M1D10M5I31M4I16M5D11M3D15M14D22M1I40M2D43M7I17M1I9M1D14M7D146M 601/880 68.3% 925/94230402 0.0% 107/880 12.2% 38141973 NA +13019 chr4 + 190214555 99903717 99903716 99903910 194 CAAACTTACTTTGTTGTCTTTCTTTCCAGCAGTTATTTCGAATATTAGTCACATAATCTTCCTCCACACTCTTTTCTACCTTTTGTAATAACATTCCTTTATATTCATTTTTGAAGTCCTTGTTGACATAATAAACAACACCCAAGTTTTCTGTTTGCATTTTAATAGTTTGCCCAGTTCCACTGTAAAAGAGA chr4 + 94230402 61761589 61761588 61761782 61761589 61761588 61761782 194 CAGACTTACTTTGCTGCCTCTCCTTCCAGCAGTTATTACGAATGTTGGACACATAATCCTCTTCCACACTCTTTTCCACTTTCTGTAACGATGCTCCTTTATATTCGTTTCGAAACTCCTTGTTGACATAATAAACAACACCCAGGTTTTCTGTCTGCATTTTAATAGTCTGCCTTGTACTTCTGCCAAAAAAA ..:..........:..:..:..:..............x.....:..:.x.........:..:..............:..:..:.....::.:::............:...:x:..x............................:.........:..............:....:x..x.:x...:x...:.:. 194M 158/194 81.4% 194/94230402 0.0% 0/194 0.0% 38142128 NA +8091 chr4 + 190214555 99905590 99905589 99905736 147 TACTTACGATCTGGGATATAAGGAATAAGGAGGATTAGAGACCATCAACTGGCTTAATAATGACACGAGGATCAATACAATTATGGGCATCAGCTGGATAAACACAGAAAAACCTCCCTATAAAAAATGATCAAAGAATAACAAATT chr4 + 94230402 61763168 61763167 61763309 61763168 61763167 61763309 142 TACTTACGATCTTGGGTATAAGGCATAGGGAGGGTTAGATACCATCAGCTGGCTCAACAAGGAGACAAGGATCAGCACTATAACAGGCATCAGCTGAATGAACATAGAGAAACCTCCCTGAGGAAAA-----AAAACCCAACAGATT ............x..:.......x...:.....:.....x.......:......:..:..x..x..:.......::..x..x.::...........:..:....:...:..........:x::....-----...:xx:....:... 127M5D15M 111/142 78.2% 142/94230402 0.0% 5/142 3.5% 38142422 NA +5872 chr4 + 190214555 99906508 99906507 99906624 117 TAAACGTACATCTCCTCTTTCCTCTTCTCTTTCATGTCCACTATGTCGATGCTGATGTTGTTGGCTATAACCAGCTCTTCCATTTGAAAAAGAATGTACACTACCTAAAAAATTAAA chr4 + 94230402 61763903 61763902 61764019 61763903 61763902 61764019 117 TAAACATACATCACCCCTCTCTTCCTCCCTCTCATGTCCACTCTGACGGTGCTGATTAGGATGACTGTAGCCAGCACGACCATTAGAGAATGAGTGCACACTACCTATGGAAAGAAA .....:......x..:..:..:..:..:..:...........x..x..:.......xxx.x..:..:..:.....x.xx.....x..:..x..:..:..........x::..xx... 117M 86/117 73.5% 117/94230402 0.0% 0/117 0.0% 38142605 NA +13420 chr4 + 190214555 99908705 99908704 99908929 225 AAATACCTGAAGGAAATCCACCCCCAAAAAATATATTAAACAAGTCTTCTGGAGTTATATCAGCTTCACAACCTCTATGGAAATTAAATCTGCCATTGTTTTGGTGGTTACATGCTTGTTCTTCATTGCCCGTGAGGTCATACTGTTTTCGCTTTTCTGGATTACTTAAAACAGCATAAGCATTTCCAATCTCTGAAA-AAGTAATGAGTAAAAGTTGGTAAGCAA chr4 + 94230402 61764382 61764381 61764607 61764382 61764381 61764607 226 AAATACCTGTTGGAAATGCCCCTCCAAAAAACATGTTGAACAAATCTTCTGGAGTAATATCAGCCTCACAGCCTCTGTGGAAGTTGAATCGACCATTGCTAGGGTGATTGCACGTTTGCTCTTCATTGCCTGTAAGGTCGTACTGCTTTCGTTTTTCTGGATTACTCAGCACAGCATACGCATTTCCTATTTCTGAAGCAAGGAAGAAATACAATTTGAAAGTCAA .........xx......x.x..:........:..:..:.....:...........x........:.....:.....:.....:..:....x:......:.xx....:..:..:.:...:...........:..:.....:.....:.....:..............:.:x........x........x..:......:-...x..x:.:..x..x...:x.:x... 198M1I27M 178/225 79.1% 226/94230402 0.0% 1/225 0.4% 38144323 NA +3046 chr4 + 190214555 99919581 99919580 99919644 64 CTTAAAAAACAAACAAACAAACAAACAAACAAAAACCTAAGCAACTAACTAATATGTTGTTCTT chr4 + 94230402 25410865 25410864 25410928 25410865 25410864 25410928 64 CTCAAAAAACAAACAAACAAACAAAAAAAGACAACCCTCAATGTTAAATTGAGTTGTTGTTTTT ..:......................x...x.x..x...x.:::x:x..:.:.xx.......:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 74508716 NA +11008 chr4 + 190214555 99923023 99923022 99923230 208 TAAAAGGTTTACTTTACTTTTAAAAGCATCTGTTGCTCCAGGTGCATGGTTTTTGTCTGGATGAAACTTCAAAGCAAGCTTTCTATAAGCTTTTTTCAAATCTTCATCACCAGCATCTTTCGTAACTCCAAGTACTTCATAGTAATTTTTACATTTGTTTATGCTGTGAACAAGAGAGTGTGTTATAATGTAAATTTCAAGGAAGACG chr4 + 94230402 61767783 61767782 61767986 61767783 61767782 61767986 204 TAAAAATGGTATTTTACTCTTAAAAGCCTCTGTTGCTCCAGGTGCATGGTTTTTGTCTGGGTGAAACTTCAAAGCAAGTTTGCGATAAGCCTTCTTTAGGTCTTCTTCACCTGCATCCTTTGATACCCCAAGGACTTCGTAATAGTTTTTATATTTCTTCATACTG----CAAAAGAAAATGAAATAAAGAGAGTAACCAAAAAGATG .....:xxx..:......:........x................................:.................:..x.x......:..:..:.::.....x.....x.....:..:.xx..:.....x.....:..:..:......:....x..:..:...----...:...:x:..xx....x.x:.:.xx.x.::....:. 166M4D38M 157/204 77.0% 204/94230402 0.0% 4/204 2.0% 38155240 NA +9717 chr4 + 190214555 99930447 99930446 99930645 199 TACCTGAGAACTCCATCTACTTGGTCTTTGGTATAGCCTTTTCCACCTTCACCACTACCAGATG---TGCTGTCCTTTGTGCAATTAGGCTTGCTTTGATCGCCACTACCTGATGGTTTTCGGCAATGAGGGCTATTTCCAGCCGTGCTTCCATTTTTCATAATTATTTCCAATAGTGCTGTAGAAAGATAAAGTACACTAT chr4 + 94230402 61789028 61789027 61789227 61789028 61789027 61789227 200 TACCTGAATACTCCTTCCATTTGGTCTTTGGTGTAGCCTTTTCCACTTTCACCTGCAGCAGACGCATTGCCCTCCTTCGTGCTACTGGGCTTACTTTGATCATTGCTACTGGCTGGTTTTCGGCAGTAAGCGCCTCCCCCAGCAGTACTTCCATTCTTCGTAATAGCTTCCAACAAAACTATAAAACAAC--AGTATATCAT .......:x.....x..:.:............:.............:......xx:.x....:.---...:x.....:....x.:.:.....:........::::....:x.x............:.:..x..:x:::.....x..:........:...:....x::......:.:x:..:..:..x:.:--....:.::.. 64M3I123M2D10M 144/197 73.1% 200/94230402 0.0% 5/197 2.5% 38141419 NA +9717 chr4 + 190214555 99930447 99930446 99930645 199 TACCTGAGAACTCCATCTACTTGGTCTTTGGTATAGCCTTTTCCACCTTCACCACTACCAGATG---TGCTGTCCTTTGTGCAATTAGGCTTGCTTTGATCGCCACTACCTGATGGTTTTCGGCAATGAGGGCTATTTCCAGCCGTGCTTCCATTTTTCATAATTATTTCCAATAGTGCTGTAGAAAGATAAAGTACACTAT chr4 + 94230402 61780725 61780724 61780924 61780725 61780724 61780924 200 TACCTGAATACTCCTTCCATTTGGTCTTTGGTGTAGCCTTTTCCACTTTCACCTGCAGCAGACGCATTGCCCTCCTTCGTGCTACTGGGCTTACTTTGATCATTGCTACTGGCTGGTTTTCGGCAGTAAGCGCCTCCCCCAGCAGTACTTCCATTCTTCGTAATAGCTTCCAACAAAACTATAAAACAAC--AGTATATCAT .......:x.....x..:.:............:.............:......xx:.x....:.---...:x.....:....x.:.:.....:........::::....:x.x............:.:..x..:x:::.....x..:........:...:....x::......:.:x:..:..:..x:.:--....:.::.. 64M3I123M2D10M 144/197 73.1% 200/94230402 0.0% 5/197 2.5% 38149722 NA +3850 chr4 + 190214555 99935938 99935937 99936021 84 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCACTTGAACCCAAGAGGCAGAGGTTGCAGTAAGCCATGAT chr4 + 94230402 76033205 76033204 76033285 76033205 76033204 76033285 81 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGAT .....x......:.........:.::........x.xx.x...x............::..x:xx:..:..:..x.---...... 75M3D6M 61/81 75.3% 81/94230402 0.0% 3/81 3.7% 23902733 NA +3201 chr4 + 190214555 99938074 99938073 99938132 59 ATGGC-GAAACCATGTTAAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGCT chr4 + 94230402 61374630 61374629 61374689 61374630 61374629 61374689 60 ATGGCTGGAACCTTGTTAAAAAAACAAACAAACAAAAAAAAAACACCAAAAAAAGTAACT .....-.:....x.........x.....x...x..........x.xx.......:..:.. 5M1I54M 49/59 83.1% 60/94230402 0.0% 1/59 1.7% 38563444 NA +12113 chr4 + 190214555 99946429 99946428 99946870 442 GAGGTCTCACCGCGGGCCGAGGGCAGTGGGTAGAGCTTCTCGGCCTTCTGCAGGAAGCGCTGGGCCTTCTCGCGGTTGCCGGCGTTCAGGGCCTCCCGGGCGATCTCGACACATTTCTCAGCCTCATCCCTGTTCCCCTCCATAGCTTGCTCCTTCTTCCGTTTCCTCCGGCAGCGCAGCTAAGAAGGGCGGAAGCCGCCGCCGCGGAGGAGGCGAGGCGGGACCGGCTGGGGGCGTGCGGCGGCAGCGGGGAGGAGCGCAG----GGG--------ACCGCGGCAG-------CGGCTGCGACGGCCCGGGCGGACGGGCGGGCCTCGCAGCTCCGCCTCCTCACGGC------GGCCTCCCCGCCCCCCGCGGGCCCCTAGGGCGCGATC-CGCATCCGTC-----CCGGCCCAGGACCAACCT---CCTGGGCCGGGGC--GTCCGAGCTGACTCGGTGGTCCGCGCACGGCGCC chr4 + 94230402 61793946 61793945 61794408 61793946 61793945 61794408 463 GGGGCTTCACCTCGGGCCGTCTCGGTGGGGTAGAGCTTCTGGGCCTTGCCGAGGAAGCGGAGGGCGCGGTCGCGGTTGCCGGCCTCCAGCGCCTCCCGCGCGATCCCGATGCACTTCTCCGCCTCGTCCCGGTTCCCCTCCATGGGCTTCTCCTTCCGCCGCCTCCGCCCGC--CGCAGCGCAGAGAGAAGGGGCCCGAAGCCAgagcggagccg-ggcggggcggagcgagga-gcggagcggc-gcggGCAGGAGGGCGGCCCAGGGCTCCCGTCACTCCGCCAGGCTCATTCCGCCGCCTCGCCCCGCGCCGCC-----GGTCCCGCAGCCCAACCGCCGCTCGGCCCAGCAGCCGGCCCGGCCCACCGCCTCCTTCCGGGGTGCCGCCGCGCATgcgccgccagccggcccgggggcggcctgcggctgctccggcacgggcccgaggggccccg-----ccgcgcacagcgcc .:..::.....x.......xxxxx:xx.............x......x:xx........xx....x:xx..............x.:...x........x......:...::..:.....x.....:....x............:.x:.x.......:x...::...x..x..--......xx...::.:x..::x...xx...:x:.x....x..-......:.x.:x:.:..:-.:.x:.....-.....x.....x..:.----...--------..:x..x...-------.x..:..xx..x....x..x.x.-----..:.:......:.x:..x..x.x....------.x.xx...x....x....xxx.::.::...:..x::.-.....x..:.-----.......:..:x.::...---x...xx....x:.--.:.....xx.x.:..-----........:..... 172M2D41M1D18M1D10M1D16M4I3M8I10M7I23M5D27M6I37M1I10M5I18M3I13M2I15M5D14M 301/427 70.5% 463/94230402 0.0% 51/427 11.9% 38152483 NA +33068 chr4 + 190214555 99948075 99948074 99950014 1940 AATACACAACTAGTTTGGGATATGACCTTTATTGAACTTATCCACCAGAGTGGAAATAATGTCTGTACAAAACCAAATGTTT--GTTACT-------ATAACTTCTGCATCACAATTAAAATCCAAACAGTTTTTTAAAAACAGTCAACTCAATCAAAACCCACTACTTCAGAATCAATAGCTTCTTTGAAGCCACAGTAACACTTAAATATGGTTAAGACTCGAATGCAGAAATTTGGTTGGTTG-GAAAGCTAATTAAACTTCCAACTTGCTCAAATAGAATTACAAAAAGGCAAAATTGTGTTTTTCACAGAGATACAGTCCACTGGAATCACCAACACTGGACAGCTGTTAGAGTATTTAGAGTCCTGAGATAACAAGGAATCCAGGCATCCTTTAGACAGTCTTCTGTTGTCCTTTCTTCCCAATCAGAGATTTGTGGATGTGTGGAATGACACCTAGGAGAGTGACAGGAATTAATTCTACTTAAGATTTTTTAAAAAATCACAGTATTTGAAACCAAGAAAGTGTATACTGTTCAACTTGAAAGGTATCTTTAAAAACATGCAGCTCAAGTATGAAGTAAAAATTCATTGAGTTATACATATAA--ATCAAATTTCATGATACAACCATACTTCCATCATTGAAAATATACTTAAATTTCCTCTCCTGGAAAAACTAATTAAAAGCAGCAAAAAATTCCTTCCTCTGAAGAAATTTTTTAAAATGTTAGAAGTTAACATACCACCACCAGCAATTGTAGCCTTGATGAGAGAATCCAATTCTTCATCTCCACGAATAGCAAGTTGCAAGTGACGAGGGGTAATACGCTTTACCTTTAAGTCTTTTGATGCATTTCCTGCCAGTTCAAGTACCTAAAAGGCAGAATCTGTCAGTTGCCTTCCAACTTTCCTTTGGCCAAGATTCAGAGAACAGAATAAAACCCTCACAAACGCAGATCTACCAACTGGAATCGTTCCTCACTATCTG-----ACTGGCAA-GATATACAGGGGGCACGCAA----TTTTAA----------------------------------TTCCAAGAGCAG-----------AGAACTCAAGCTCAGTAGGATCCTTGTTGAACACC-----------AGCTCCCTCTA------GCGTTCTCTTAGGCCT------------------CTCGCCGCGT------------------------------TCAGGGCCTG------------GGAGTTTTCTTGCATCACTTTCCTCCTTCCCTCTTGCCGCCTCCCCGCCCCCCAAACCTTCTCCGGATTATAG----GCGTTCACCC----------ATTTACCTCTGCGGTGAGGTACTCCAGGATGGCTGCGCTGTACACAGCGGCAGTCGCGCCCACACGTCCATGACTGGTCGTCCTAGATTTTAGGTGTCGATGAATACGGCCCACTGGGAACTTAAATTTTAAGCATACACAAACATAAAT-GCACAAAAATGAGAACTAGAGATG---GGGAAATTATATGC-GCGCCAAAGCAAGGGGCACGGGCGCAGCAACGCGTCCCGAC--------ATCGAAACACGTGATTCCTCCCCCCCATA-------------TTTATCGTATGG--GCAGCCCAAGTCGCGACACCG---CATCACCCACGCATACACAAA-------------------------------------------ACGCCCATC-----GAGAGCGAT-------GAATAACAAAA------AAGGAAATGCAAAGAAAAACATCATGACTCCCAGACTGCACGAACAA------CTACTGACCTGCAAGCCGGCTCTCTGCGAGCGGGAAACCGCCTTTGTCTTGGCCTTTCCGGAGTCCTTTCCAGCCTTACCGCCAGCCTGCGGCGCGCACACGCCCGCGAGCGGAGGAGGAACGGAGAATATAGAATTACCAAGGCGGCGCGCCCATCCCCCACC---------GCGGCGCGTCCCGCCGCGAGCG-------CGTCCCCGCACCCTGC-----------------CGGGGTCTCCGGCCCGCGGCGCGCCGCAGGG-----GCGACCCCGCC-----CGTTCG--CCCCCCGCCGCGCGCTCGCC--------------ACGGCCGCGCGCCTCCGC--CCG--CCGGCCCCCAGCGGCGCTGCGCG----CGCCACCCAACCGTCGCCGCCCGCCGCGA----GATCCGAGGCTGCTCCG chr4 + 94230402 61795233 61795232 61797221 61795233 61795232 61797221 1989 AAGACACAACCAGTATTC-ATATACCATTTATTGAATAGTTCCACTCTAGTGGATGAAAAGTCTGTACAAAACCAAACATTTCATTTACTTAGTCAAATGCCATTTACTTACTTAGTCAAACCAA--------TCTAAAAACAGTCATCTCAATCAAAACCCACTGC---AAATACAATAGCTTCTTTGAAGCCATGGTAACACTTAAATACGGTTAAGACTTCAATGCAGAAATTTGGTTTCTTGAGAAAGCTCGAGCGAGCCTCAGCTT-CTGAAA----GTTACAAAAAGGCAAAACTGTGTTT----CACAGATACAGTCCACTGGAATCACCAACACTGGACAAT-----AAGTACTTAGAGTCCTGAGATAACAAGGGAACCTGGTATCCTTTAGACTGTTTTCTGTTGTCCTTTCTTTCCAATGAGAGATTTGTGGATATGTGGTATTACACCTAAAGGAAAAACAA-------------TTAAGACAATGT------------TATTT-------------------CTCTTCAATTTT---GCTAACTTT-----CACGC--TTCAAA---AAGGTCACAG---ATTAAGCTACCCCTGTATCTGTCAGGCTTATTGCCACAAACA--------------------------------------------------------GCGACAAGCAATTT-------------------------------------ACGTACCACCACCAGCAATTGTTGCCTTAATGAGCGAGTCCAATTCTTCATCTCCTCTAATTGCAAGCTGCAAGTGACGGGGAGTGATACGCTTCACCTTCAAGTCTTTGGATGCATTTCCTGCCAGCTCGAGAACCTGAA-----------GACAGATGTTTTTGAA-----------ACAAGTTACACACATCA-AATGAGAC---CACGTGCACAGCCTTA------------GCTACTCTCTACCCAAATGCACTGGTAGTGACA---AGATGGCACACAATGCTTTTTAAAGAGTTCCTTCTTTGGAGCTCTGGATTTGGTTCTCTCCAAGAACAGTGTTCTACAGCAGATATGAAGTGCTGTA-ACTGCACGTTAAATACTTCACACTTCCATGCTTTTTCTAAATAGTGGATTTTTTTTACCCTGTATTTTATGCAGGTAAAATAGCTGCGTATACTTCATTGTCTACTGAGGAAGCACACACCTGGACCTGCTCAAAATGCATGAAGAGCTCACAGTTCAGCCTCAACCTGTGAT-TAGTGGACT--CTGGTCCTCATGCCATTCTGGAGTTATTATCCTGCATGCACCCCTCCCAGGGGCTTTACCTCAGCTGTCAAGTACTCCAGGATGGCAGCACTGTACACAGCAGCTGTTGCTCCAACACGCCCATGGCTGGTAGTCCTGGACTTCAGGTGCCTGTGGATGCGGCCTACAGGGAACT----------GCAAAAAT-AACATAAGTAGAGCAGATTTG---ACCAGAGATACATGGAAAGAAACCCACTGCTCCAAAGCACG----------ACAGAAATGCCCCACTACAGAACACTATTTCAGCACTTAGCATCTCACCCTTACAGCTGGATCCCAACTTCACCACTCTGCAGCAGCAAAAGCTTAGAGACCATTCTCTTACCCAGCCACACAAATATGCAATAAGTCTAAAAGAACAGGACCAAGCTGGACAGTTCCTTACACTCCTCCAGATAAGAGTAATACTGCAGGATTCACACGACACACCCAGGAGATGCAAGGCTAA----CCCGACTTCC---CTTCACCCACACCCCTCTCCGCTCACCTGCAAACCAGCCCGCTGAGAACGGGACACCGCTTTTGTCTTGGTCTTTCCGGAGTCCTTCCCAGCTTTGCCACCAGCCTGACGAGAACAGACGC----------GTGAGGCCCGG-------CGCTCTACC-AGCCGCCACCCCCCTCCCCTCCCCCCCCTCCAGCGGCGCACAGC-CCGCGCGCAGTAGCACCACCGCCGTACTCCGCATGCGNNNNNNNNNNAGCGGAG----AGGGCAGGAGGGCGGCCCAGGGCTCCAGTCACTCCGCCAGGATCATTCAGCCGCCTCGCCCCGCGCTCGCCGGTCCCGCAGCCCAACCGCCGCTCGGCCCAGCAGCCGGCCCGGCCCACCGCCTCCTTCCGGGGTGCCGCCGCGCATGTGCCGCCAgccggcccgggggcggcctgcggctgctccg ..x.......:...x.xx-....:x.x.........:xxx.....:xx......x:x..x.................::...--x.....-------..:x.x.:.:.x.xx:x.x.x...:.x.--------.:............x.................:.---.:.xx....................::..............:..........:x.................xx...-.......x:xxx:.x:::..:...-..x...----:................:.......----..x..................................::-----:....:......................:.x..x..:...........x..:.................:.....x..............:.....x..x.......:::..:x:...:-------------......:xx.x.------------.....-------------------..x.....:..x---.x..x....-----..:..--:....:---:.:..x.x.:---...:..:..:x.x.:..x--:...:::..xx..x:....x..--------------------------------------------------------..::...:x....:-------------------------------------..:...................x.....:.....x..:.................x.x...x.....:...........:..:..:........:.....:........x.................:..:..x....:..-----------.x...x..::..:x..-----------x....x.x..x.x.x..-...:.:..---...:x:.:...x::..------------.:.x...x...:.::-----.....:.:-..:.---..:x.....:...----......----------------------------------:.......:...-----------...xx.x...:x.x...-:x.x.x:...:..:..:-----------x...:::....------.x:..:.:..x:x...------------------x.x..:....------------------------------:.x..:....------------.:..xx:..x::xx...x::..xx...x:xx.-.x.:x.x..--.:.x:..:..x:..x.:::x.::....x:----..:.x.....----------x........x..x..x.:...............x..:...........:..x..:..x..x.....:.....:.....x.....:..:..:.....:.x:..:..:.....:..x.......----------...x.x.:-.......:.-.x:..:.xx..---..:......:---..:..:xx.:x::.-..x........x.----------:...x..:..x:.x.x..--------..:xx.:...x.:::x:...x...::.:.-------------..:.:.::x:x.--.....xx...::xx..x...:---:x.:.....xx..:...x.x.-------------------------------------------..:.:.x..-----:....::..-------..x.x...x:.------x....:......:.xx..----.x:....:..---..x...xx...x------.::..x........:..:..:.x...x..:.....x.....:..........:...............:.....:..:..:........xx.x.x:..x....----------:x....xx...-------x.xx:....-..x..x.:.x...x.....:x..---------.......::xx.-.....x..:-------.::.x...:..:.:..-----------------...:.----x..x.x.x:.x...x.x.....-----.:x..:.....-----.:...:--.x..:....x..........--------------..x.....x..x.:.x..--...--.......x.x..xx.x:.x..x.----....:.x..xx:.:....:x...x.x..:----.::.:.x.......... 18M1D63M2I6M7I28M8D34M3D76M1I24M1D6M4D25M4D39M5D119M13D12M12D5M19D12M3D9M5D5M2D6M3D10M3D18M2I22M56D14M37D141M11D16M11D17M1D8M3D16M12D15M5I8M1I4M3D13M4I6M34I12M11I17M1D17M11I11M6I16M18I10M30I10M12I32M1D9M2D29M4I10M10I122M10D8M1D9M1I11M3D10M3I14M1I13M10D18M8I29M13I12M2I21M3I21M43I9M5I9M7I11M6I18M4D10M3D12M6I103M10D11M7D9M1D23M9I12M1D9M7I16M17I5M4D22M5I11M5I6M2I20M14I18M2I3M2I23M4I29M4I17M 1208/1662 72.7% 1989/94230402 0.0% 605/1662 36.4% 38152842 NA +13478 chr4 + 190214555 99949268 99949267 99950361 1094 TTTACCTCTGCGGTGAGGTACTCCAGGATGGCTGCGCTGTACACAGCGGCAGTCGCGCCCACACGTCCATGACTGGTCGTCCTAGATTTTAGGTGTCGATGAATACGGCCCACTGGGAACTTAAATTTTAAGCATACACAAACATAAAT-GCACAAAAATGAGAACTAGAGATG---GGGAAATTATATGC-GCGCCAAAGCAAGGGGCACGGGCGCAGCAACGCGTCCCGACATCGAAACACGTGATTCCTCCCCCCCATATTTATCGTATGGGCAGCCCAA-GTCGCGACACCGCA--------------------------TCACCCACGCATACACAAA-------------------------------------------ACGCCCATC-----GAGAGCGAT-------GAATAACAAAA------AAGGAAATGCAAAGAAAAACATCATGACTCCCAGACTGCACGAACAA------CTACTGACCTGCAAGCCGGCTCTCTGCGAGCGGGAAACCGCCTTTGTCTTGGCCTTTCCGGAGTCCTTTCCAGCCTTACCGCCAGCCTGCGGCGCGCACACGCCCGCGAGCGGAGGAGGAACGGAGAATATAGAATTACCAAGGCGGCGCGCCCATCCCCCACC---------GCGGCGCGTCCCGCCGCGAGC-------GCGTCCCCGCACCCTGCCGGGGT----CTCCGGCCCGCGGCGCGCCGCAGGGGCGACCCCGCCCGTTCGCCCCCCGCCGCGCGC-TCGCCACGGCC-------GCGCGCCTCCGC--CCGCCGGCCCC---------CAGCGGCGCTGCGCGCGC----CACCCAACCGTCGCCGCCCGCCGCGAGATCCGAGGCTGCTCCGCTAGCAGCCGACAAAACACCTCCCCCCACTCTTCTAA--------ATCCTGTCTCCGCGCGTTCCCAACCGTCGCCACTTCACCCCCATCCCTCTGTGTAACGG-----GTTTTTCTCTCGCCGGCAAAAACCCGCGGAGTC------ATCGAGCGT---------CTCTGCGAAG-TTTACCATTTCGAATTCCGCTGAAGCTCAAGCAAGCAAGGCAGAGAAAAGGCTAATCGGACCCACGGTG----------AGATCCCACCACCTACTCCTTCGTCGCACCGCGATTCAAACTGCGCTGTCTCCCGCCTTCCCTGCTCCCTTTAT-ACTGCAGAATGTTCCCTCATCCGGGAACTCGGATTGCTCATCCCACCAATGGCTGC chr4 + 94230402 61798365 61798364 61799562 61798365 61798364 61799562 1198 TTTACCTCAGCTGTCAAGTACTCCAGGATGGCAGCACTGTACACAGCAGCTGTTGCTCCAACACGCCCATGGCTGGTAGTCCTGGACTTCAGGTGCCTGTGGATGCGGCCTACAGGGAACT----------GCAAAAAT-AACATAAGTAGAGCAGATTTG---ACCAGAGATACATGGAAAGAAACCCACTGCTCCAAAGCCCATGACAGAAATGCCCCACTACAGAACACTATTTCAGCACTTAGCATCTCACCCTTACAGCT---------GGATCCCAACTTCGCCACTCTGCAGCAGCAAAAGCTTAGAGACCATTCTCTTACCCAGCCACACAAATATGCAGTAAGTCTAAAAGAACAGGACCAAGCTGGACAGTTCCTTACACTCCTCCAGATAAGAGTAATACTGCAGGATTCACACGACACACCCAGGAGATGCAAGGCTAACCG----GACTTCC---CTTCACCCACACCCCTCTCCGCTCACCTGCAAACCAGCCCGCTGAGAACGGGACACCGCTTTTGTCTTGGTCTTTCCGGAGTCCTTCCCAGCTTTGCCACCAGCCTGACGAGAACAGACGC----------GTGAGGCCCGG-------CGCTCTACCCA-CCGCCACCCCCCTCCCCCCCCCCCCCTCCAGCGGCGCACAGC-CCGCGCGCAGTAGCAGCACCGCCGTACTCCGCATGCGCTAAGCTCCAGCCCAATTCCCCCCGATGAGACGCCGGCGCCTGCGCACTGCCCGCTACACTCAGTAGCGCGGCCTCTCCCTGCGCGCATGCGCGGCCACCACTCCCTCTCCCCGGCGGCAACAGTGCGCTTGCGGCTCGcctccccgccgccctcttcccc-----------cctcccccccagctccctccaacccccctttccgccgccTACCGGCAAGCAGCACATCGGCGGCGCGCGCTGCCCGCCCGCGCT------CCCCTCCCCCTTCGCCTAACGGTCGCTGTCCCTCAGCCTCCGCCA-----TCGCGGCCTCCACCCGGCCCAGCGGCCTCCCCCACCCCGCGACTCCTCACCATCGCGAACCGGACCGCCGCGCAGAGATAAACAGGAGGAAGAGAGCGTCCCGCAAGCACCGAGCCCGGACAACGGAACCGACCA------GCCCCGACCCGCCGCGATTCAAACTGCACCCGCTCCCGCCTTCCCCCGGCGCTTTATAACCGCCGAGC-CGCCTGCATCCGGGAACCCCGGCCTCGCCGCCAGCCAATGGCTGC ........x..x..x.:...............x..:...........:..x..:..x..x.....:.....:.....x.....:..:..:.....:.x:..:..:.....:..x.......----------...x.x.:-.......:.-.x:..:.xx..---..:......:---..:..:xx.:x::.-..x.......xx:x.:..x::::..xx..x::.:xxx.:x:..:xx.:...x.:::x:...x...::.:.x:.---------.x.x.....-x....x..x.:...--------------------------.:.....xx..:...x.x.-------------------------------------------..:.:.x..-----:....::..-------..x.x...x:.------x....:......:.xx..x.:----....:..---..x...xx...x------.::..x........:..:..:.x...x..:.....x.....:..........:...............:.....:..:..:........xx.x.x:..x....----------:x....xx...-------x.xx:....x.-x..x.:.x...x......x..---------.......::xx.-.....x..-------..::.x...:..:.:..xx.x.:----....:....:xxx.x.x...xx.:.:..x.xx....:.:x.:.:x.....::.:.x.-x::x.:.....-------......x.x...--..:..:x:...---------.:..::.:x.....x:..----.:..:xx...:....x:.:x..x.-----------.:x.:..x.:...xx..xx...xx.x...::..x.xx:..x.:::--------.:x::.x.xx......:.x..x:..xx...:------....:x:....::.:x......-----..:::..xx:.x...x..-----:.....xx..------::.x....x---------.:.:....xx-:.:.....:x....::xx:.:.xx..x..::x.x:x.x:.x..::.:.::..xxx:..x.xx...x.x.----------:..x..x....------x.::..x.x.:................:.:xx.............:xxx.x......-..:..x..::-:x..:x...........:.x.:::x.x.xx..x:........... 121M10D8M1D9M1I11M3D10M3I14M1I73M9D9M1I14M26I19M43I9M5I9M7I11M6I21M4D7M3D12M6I103M10D11M7D11M1D21M9I12M1D8M7I23M4I57M1I11M7I12M2I11M9I18M4I24M11D45M8I31M6D22M5I18M5D10M6I9M9I10M1I69M10I11M6D57M1I10M1D45M 661/1016 65.1% 1198/94230402 0.0% 260/1016 25.6% 38150903 NA +3165 chr4 + 190214555 99964341 99964340 99964397 57 AGAGGAGGAGAAAGAAAAAGGTAGAAAGAGAGGAGGAGAGAGAAAAAAAAATTTGCT chr4 + 94230402 40414745 40414744 40414801 40414745 40414744 40414801 57 AAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAAAATCTGCT .:....::.:...::::::..x:......:......:.....:..:......:.... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 59549596 NA +3655 chr4 + 190214555 99967161 99967160 99967218 58 GTTCCACATTGTTTTTCATTGTTGTTGTTGTTTGTTTGTTTGTTTTGAGACAGAGTTT chr4 + 94230402 81178904 81178903 81178961 81178904 81178903 81178961 58 GTTTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAGGATATAGTTT ...:::.:........::.......................x...x::..:.x..... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 18788257 NA +3023 chr4 + 190214555 99986338 99986337 99986386 49 CATCTAAAAAAAAAAAAAAAAAAAAAGTTGAGGAGAGAGGTGAAAGGAA chr4 + 94230402 1046826 1046825 1046874 1046826 1046825 1046874 49 CACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAA ..:.x......:......:.......:.:.....::....x....::.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 98939512 91275043 +10654 chr4 + 190214555 99990708 99990707 99990946 239 TAAAAATTACTGCAGTTTGGCACCTGGGTCTAGTTAAGCTGGCGGATGAGCTGATTGATGCGTTCACCCCGATAGCCAGGTGTGCCCATCTCCTTGAGGAAGCCCACTCTAGTTTTGGTAGCATGACGGGCCACTGAGAAGTGGAAAGGGCGCAAGAACCATGAGCTCTCCTGGAAATGCTTCCCTGGGAAGGCAATTTAATGAATGAGGTCTTCCAAGCCAATGACGCCAAACGTCCC chr4 + 94230402 56084762 56084761 56084994 56084762 56084761 56084994 233 TAGAAGTTAC----ATTCCTCACCTG--TCTAGTTCAGCTGACGTATAAGCTGGTTGATTCCTTCACCTCTGCAGCCAGGCTTACCCATCTCCTTGAGGAAACCCACTTTATTATGTGCAGCATGGCGGGCCACTGACAGTTGAAAGGGCCACAAGAAGTCTGTGACATTTCTGAAATACTTCCCAGCTGAGTAGATTTCATGAATAAGGTCTTCCAGGCAAATAATACCAAAGTTCCC ..:..:....----:..:xx......--.......x.....:..x..:.....:.....x.x......:.x::.......:x.:.................:......:..x.x.xx.:......:...........x.:x..:..:..x.:......x:x..x.x:x.:::x.....:......x.xx:..xx:....x......:..........:..x...:.::.....xx.... 10M4D12M2D211M 170/233 73.0% 233/94230402 0.0% 6/233 2.6% 43905946 NA +4135 chr4 + 190214555 99991054 99991053 99991196 143 ATCCCCAGGTCACATAAGGTTCCACTACACGCAGCACTTTTAGGTTCTAGGGGGTGACTTTTACAAAGACACCACTAAAAATTTTCTTTAGGCGAAGTCTTGCAATGGTTCTCTGCACCAGTAAACTCAGGCCATCGGTCCTT chr4 + 94230402 56085597 56085596 56085739 56085597 56085596 56085739 143 ACCCCCAGGCCACATAAGGTTCTACGATCCGCAGCATCTTCAGCGATAATGGAGACAATTTAACGAATGTTCCAGTGAAAATTTTTCTCAGCCGCAGCAACTCGATCACTTTTCTTACCCTCATACTCACTCCTTTAATCCTT .:.......:............:..x.:x.......::..:..xxx:x.x..:.xx.x...x..:..x::x...x.:........::.:..x..x..:xx:x.:..x::.:.::x:...xx:.x.....xx..x.:::..... 143M 87/143 60.8% 143/94230402 0.0% 0/143 0.0% 43905457 NA +4637 chr4 + 190214555 99991374 99991373 99991453 80 AATGCCTGCTTTGCCTGGGTGGCTTTGCGGGCTTGATAAGCCTTCCTCTTTTTCAGGAGATTTTCTGGAACCAAAGGGAT chr4 + 94230402 56087244 56087243 56087323 56087244 56087243 56087323 80 AGCGCCTGCTTGGCCTGAGCGGCCTTGATGGCCTGGTAGGCCTTCCTCCTCTTCAGCAAGTTCTCCGGCACCAACGGGAT .::........x.....:.:...:...xx...:..:..:.........:.:.....x.::..:..:..x.....x..... 80M 60/80 75.0% 80/94230402 0.0% 0/80 0.0% 43904130 NA +7407 chr4 + 190214555 100024838 100024837 100025366 529 TGCTTTTCTCAT---AGAATATACTCA------TTTCTTTCATATCTGAACCATAGCTGAAGTAGTAGATTCCCATGCTTTTCCTCCTGTCTCATTTTTCTTTTTTGTAGCTCCTGGCCACAGTGGGAGCCATGATCTCTCTCCTTTACATGTGGCTGTATTCCCAGAGCTTTCATTTCCATGTGGCACATTTTTATGCTCATTTTGGGTACCCCAGTGCTCAGCATATTGTTAGGCAAAGATACGTGAAAAGTAAGGTAACTTTGTTTCTCTGGTGCTATTCCACTGGGGGAAAAGAGGTGGGGAGAGATTTGCTGGTTAGAGTTCTAAAAGTAATGGCAAAAACCACAATTAACTTTGCACCAACCTAATATATCTGTAGGCTTATAGGTTTTAGCATTAAGCAGTTAATTGAGTCCGTTTTTAAAAATATAATATCTTTTGTTTACCT-AGGAGCTGGTGTAGTGAAGGATGAAGAGAAGGCAATGCATTGGTTTAGGTAAGATGATGACATCTGCCCAAAAGCAAAGCTTCAGAG chr4 + 94230402 61807860 61807859 61808300 61807860 61807859 61808300 441 TGCGTTTCTCTTCGGGGAACATGCTCAGGAGGCTCTATAGCTCATATGAGTATTTGCTG---TAGCCAGTCCCTGGCTCCTTTCTCTCCTCACATTTC-CTGTTTTGCAGCTGCTGGCTGTGCTGGCAGCCAGCCTGCTGCTGCTCTGCATCCCGCTGTGCTACCAGGCCTTTCATTTCCACGTGGCACAGGCCTACGCACGCCTTGGGTACCCCCACGCCCAGCACATTGTGGGGCAGAGGTATCT-----GCGAGGTAACCTT----------TGCTGTT--------------------GGAGGACATCTGTGCATGAGAATCTCAAATGTGGC--------------------------------------TCTGCATGC---TGGGTTTGGCCACTGTGT------TTTACGTCATCACCGTGACTTCACCGCCTTGCCTTTATCTCAGGTGCTGGAGTGGAAAAAAATGAGGAGCTGGCCATGCACTGGTTCAGGTGAGCTG------------CAAAAATATAACTCCTGAG ...x......x.---:...:..:....------.:.x.xx.x:..x...::xx.x....---...:x::.:..::xx:::..:...::x..x.....:-..x.....:....x.....::::x...x.....xxx.x::x..x..:.:...x:x.....::.x....:x............:........xx::..:..x.:::...........x::..:.....:.....x:....:..:..:x.-----.::.......:..----------....:..--------------------..::..x..:..:xx:.x...:.:::...x..:::--------------------------------------....:.x..---.:.....x:x..:.:x.:------..x.xx:.:.:x:::x:.x.x:.x:::...x:x....:..-...x.....x..:.x:..::....:...xx...x.....:.....:....:..x..------------.....::.x.:..:.x... 12M3I12M6I26M3D36M1D148M5D13M10D7M20D35M38D9M3D18M6D40M1I56M12D19M 273/431 63.3% 441/94230402 0.0% 108/431 25.1% 38216978 NA +3022 chr4 + 190214555 100044504 100044503 100044552 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 47264042 NA +3087 chr4 + 190214555 100060089 100060088 100060158 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:.........:.::.:......x.xx.x...xx:.x.........:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 24026892 NA +3097 chr4 + 190214555 100064892 100064891 100064979 88 CTCCTTCCCTTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCCCTCCCTCTCTTTCTTTTTCTCTCTTTCTTTATTTCTGTTTTTT chr4 + 94230402 80596148 80596147 80596235 80596148 80596147 80596235 88 CTTCTAATTTTTTCCCTAGTGCTATCTCTACTCCAGTGAGCCCTTCCCTCTCTCTTTCTTTTTATCTCTTTCTTCACCACTGTTCTTT ..:..xx::..:..:..:x:x..:.....x:::.xx.xxx:.:::.:.:..............x..........:.::x.....:... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 19468744 NA +6393 chr4 + 190214555 100077557 100077556 100077717 161 GGCAATTAGTGGAGTATTCTTCCCAGTAA----------ATTATAATCTAGTTCAGTTTATATTAATTATACTTTGGTAGCAGTGCCATTATGTGAATGTTAATTT----TATTAACAATATATTTTGACTATGGTGGATTGGCAAATTAGAAACAATTTCAGTGTTTCTTAAAA chr4 + 94230402 61811196 61811195 61811370 61811196 61811195 61811370 175 GGCAATTAGGAGGATTTTCTTTCCCCAAACACAACTCTAATTATAATCTAACTCAGCTTATTTGAAGTACATTTTGGTAGCGTTTCCATTATGCAAATATCAATTTATTATCCTCACATTATGTTTTGACTACGGTTGTGTTGCTAATTAGAGGCAATTTGGCTGCTTTAAAAAA .........x:.::.x.....:..xxx..----------...........::....:....x.x..x..:.:.........:x.x........::...:.:.....----.x:.x...x...:.........:...x.xx.x..x.......::......x:x..:..:xx.... 29M10I67M4I65M 117/161 72.7% 175/94230402 0.0% 14/161 8.7% 38266361 NA +3255 chr4 + 190214555 100079645 100079644 100079769 125 TGTTTTTTCTTTTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCATCTTTCTTTCTCTGTCTCCTTCTTTCCTTCTTTCCTTCTTCCCTGTCTTTCTTTCTCTCTTCCTTT chr4 + 94230402 37898148 37898147 37898272 37898148 37898147 37898272 125 TACTTCTGTCTGCTTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTTT .::..:.x::.x:..............x.....x......x...x::.:..x.:..xxx...x.::..x.xx.xx::x..x....:..xx.x.:.....x:.xx.x.:.....:.x.:..x:... 125M 77/125 61.6% 125/94230402 0.0% 0/125 0.0% 62181497 NA +3072 chr4 + 190214555 100079658 100079657 100079770 113 TTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCATCTTTCTTTCTCTGTCTCCTTCTTTCCTTCTTTCCTTCTTCCCTGTCTTTCTTTCT--CTCTTCCTTTC chr4 + 94230402 93060600 93060599 93060714 93060600 93060599 93060714 115 TTCTCTTTTCTATTGCTTCCCTCTGGCTACCTTTTCTTGTTTTACCCCTTCCTTCCTCATGGATCTGAGTCCCCTTTTTCTTCCTTTTCTGCCTTTTTTTCTAACTCATGCTTCC ..:......::x..x:...::...xx..x::.:..::.x.:..x.x:...:...:...xxxxx:..xxx.:..:.:....:.:...::...:....:.....--...x.x...:. 102M2I11M 69/113 61.1% 115/94230402 0.0% 2/113 1.8% 7019058 NA +3078 chr4 + 190214555 100079682 100079681 100079777 96 TTCTTTTTCTTTCTTTCTTTCATCTTTCTTTCTCTGTCTCCTTCTTTCCTTCTTTCCTTC---TTCCCT------GTCTTTCTTTCTCTCTTCCTTTCTTTCTTT chr4 + 94230402 34797283 34797282 34797387 34797283 34797282 34797387 105 TTCTGTTTTTCCTTTTTTTTCATTTTTCTTTCTCTTTCTTCCTCTTCCCAGTCTGCATTCCCATTCCATACACAAGCACTGCTGACTCTGTTCCCTCTTGTTTTT ....x...:.:::...:......:...........x...:.:....:..xx::.x.x...---....x.------.:x:.x..xx....x....:.::.x.:... 60M3I6M6I30M 66/96 68.8% 105/94230402 0.0% 9/96 9.4% 65282399 NA +3406 chr4 + 190214555 100079704 100079703 100079777 74 TCTTTCTTTCTCTGTCTCCTTCTTTCCTTCTTTCCTTCTTCCCTGTCTTTCTTTCTCTCTTCCTTTCTTTCTTT chr4 + 94230402 57372027 57372026 57372099 57372027 57372026 57372099 73 TTTTTCTTTTCTTGTCCCTGTCCT-CCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT .:.......:::....:.:x..:.-......::.:..xx::x....:.............:....x.....x.. 24M1D49M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% 42707677 NA +3004 chr4 + 190214555 100089316 100089315 100089350 35 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTG chr4 + 94230402 45081600 45081599 45081634 45081600 45081599 45081634 35 GCTTTTTGTTTGTTTGTTTGTTTTGTTTTATTTTG .:...........................:..... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 55007716 NA +3017 chr4 + 190214555 100089316 100089315 100089357 42 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGA chr4 + 94230402 53284439 53284438 53284480 53284439 53284438 53284480 42 GTTTGTTGTTTGTCTGTTTTTATTGTTTTGTTTTGTTTTTAA ....x........:.....x.x..................:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 46804877 NA +3255 chr4 + 190214555 100104768 100104767 100104905 138 TATATATATGTATATATGTATATATATGTATATATGTGTATATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTATAT-----GTATATATGTATATATGTGTA chr4 + 94230402 89812949 89812948 89813086 89812949 89812948 89813086 138 TATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGT----GTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA .....:.xx..:.x.:..-::.....x:..x............x.:x..::x.xx...:.....:.x.:x:x:..::....:.x:x...----..:.:.:...........x..x..-----..x.x....x.:.x:::.... 18M1D70M4D24M5I21M 87/133 65.4% 138/94230402 0.0% 10/133 7.5% 10291819 NA +3094 chr4 + 190214555 100104770 100104769 100104853 84 TATATATGTATATATGTATATATATGTATATATGTGTATATATGTATATATGTATATATGTGTATATGTATATATGTATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.:.:.x...:.:.:.:...:.:...xx:.:..x:::..:.......x...::...x....:.:.:..::.:.:... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 14270237 NA +3689 chr4 + 190214555 100104786 100104785 100104882 97 TATATATATGTATATATGTG------TATATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTAT chr4 + 94230402 21109194 21109193 21109296 21109194 21109193 21109296 103 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ....:..:...:.x.x....------.x........:x:.::....:x:.....:x.:..::......:x:...:x.x.:.......:.....:x..:..:.. 20M6I77M 66/97 68.0% 103/94230402 0.0% 6/97 6.2% 78995592 NA +3350 chr4 + 190214555 100104799 100104798 100104877 79 ATATGTGTATATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTATATGTATATATGTATATATG chr4 + 94230402 85834538 85834537 85834616 85834538 85834537 85834616 79 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x.....x.:.:...:.:.:...:...xx:....x:::..:.......x...::...x....:.:.:..::.:.:... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 14270261 NA +3105 chr4 + 190214555 100104842 100104841 100104944 103 TATGTATATATGTGTATATGTATATATGTATATATGTGTATATGTATATATGTATATATGTGTATATG--TATATATGCTCTTTGTATGTGGGATTCATTCTTCT chr4 + 94230402 85834533 85834532 85834635 85834533 85834532 85834635 103 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATT--TTCTTCT ...x:..x.:...x.:.:...:.:.:...:...xx:....x:::..:.......x...::...x....--:.:...::.x.x.x.:x..x..:...--....... 68M2I26M2D7M 67/101 66.3% 103/94230402 0.0% 4/101 4.0% 14270309 NA +3178 chr4 + 190214555 100119670 100119669 100119765 96 CTAAAACTCAAAGT---ATAATAATAATAATAATAATAATAATAATAATAATAAAAGAAAAACGCTATTGAGAAGAAATCAATAAAATTTGACATGTTG chr4 + 94230402 57309420 57309419 57309518 57309420 57309419 57309518 99 CCAACACTGGAAGTTCTGTAATAGCAACAATAATAAAAAGAATAATAATTCCAAAAATTGCATTTCATAGTGGAGAAATAAATGAAATCTGATGTAATG .:..x...x:....---:.....::..:........x..x.........xx:....:xx:x.:x::..x.x.:......x...:....:...::.:x.. 14M3I82M 64/96 66.7% 99/94230402 0.0% 3/96 3.1% 42810250 NA +3007 chr4 + 190214555 100119766 100119765 100119814 49 ATGAAAAAAAAAAAAACCACAAAACGTTGGACTGAACAAAATACTTCTG chr4 + 94230402 41008192 41008191 41008240 41008192 41008191 41008240 49 ATGAAAAAAAAAAAAAGCACAACAAATTAAACTTGACAAAAGACTTCTG ................x.....x.x:..::...x:......x....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 59111574 NA +3239 chr4 + 190214555 100126240 100126239 100126311 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACCTGAACCCTGGAGGTGGAAGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x...:.......x.:..x.xx::.:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 24093034 NA +4332 chr4 + 190214555 100131586 100131585 100131684 99 TTCTGTA-----ACACTGGGCTACTTGCTCAATCAGACTGAGCCTCAATTTTTTCATATGTAAAATGGAGATAATAG----TATCTACCATATAGGGTTGTCGTGAGG chr4 + 94230402 83501130 83501129 83501237 83501130 83501129 83501237 108 TTCTGTACCCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGG .......-----..x......x.x..:..:..:.x.xx..x......:....::..:x............x.:....----..:.....x:.:....x.:.:...... 7M5I65M4I27M 75/99 75.8% 108/94230402 0.0% 9/99 9.1% 16630456 NA +3100 chr4 + 190214555 100158459 100158458 100158515 57 TTTTTCTTTTTCTTTCTTTCCTTCCTTTCTTCCTTCCTCCCTCCCTCCCTTCTTCTC chr4 + 94230402 7218318 7218317 7218374 7218318 7218317 7218374 57 TTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTC .....:.........:x.:.:....:::..:..::..::......:..x....::.. 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 92940141 NA +3284 chr4 + 190214555 100178406 100178405 100178486 81 ACACACATATATGTGTGCACACATATATACACACATATATGTGTATATATGTGTGCACACATATATACACACATATATGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTG------TATATGCATGCACGTAAGTG ..........x::::....x...:..::.:...x.x......:...x.:......------.....:..::..::..x... 55M6D20M 54/75 72.0% 75/94230402 0.0% 6/75 8.0% 77578208 NA +3486 chr4 + 190214555 100178440 100178439 100178547 108 ATATATGTGTATATATGTGTGCACA--CATATATACACACATATATGTGTGCAC----ACATATATACACACATATATGTGTGCACACATATATACACACATATGTGTGCACAC chr4 + 94230402 21109195 21109194 21109302 21109195 21109194 21109302 108 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGT------ATATGTGTATGAATATGCATGCACAC ...:......:.x.x....x..::.--:....:...x........:x:...:..----..:...:...x..:::x.x.....------....:.::.::x.....::....... 25M2I27M4I24M6D26M 72/102 70.6% 108/94230402 0.0% 12/102 11.8% 79069245 NA +3021 chr4 + 190214555 100178587 100178586 100178663 77 TATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATGTATACACAT chr4 + 94230402 58675366 58675365 58675442 58675366 58675365 58675442 77 TGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATAT .:.:.x..x..x::x..x.x:......x.x...:::..:..........x........::......:x:.x.:.:.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 41503221 NA +3472 chr4 + 190214555 100178782 100178781 100178846 65 ATACATATATATACAATGTGTATACATATATATACACATATATATGTATATACATATATATACAT chr4 + 94230402 43288468 43288467 43288532 43288468 43288467 43288532 65 ATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGAT ....:...:...x...x:.:.......:....x.::.......:...x.:.:........x.x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 56890314 NA +3997 chr4 + 190214555 100178794 100178793 100178880 87 ACAATGTGTATACATATATATACACATATATATGTATATACATATATATACATACATATATGTGTGTGTGTGTGTGTGTATGTGTAT chr4 + 94230402 32744947 32744946 32745030 32744947 32744946 32745030 84 ACAATGTACACCTATCTATCTATACATCTACAGA---ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT .......::.:x:..x...x..:....x..:.x:---...:.x...:.........:.:.x.....::.......:.......:... 34M3D50M 62/84 73.8% 84/94230402 0.0% 3/84 3.6% 67433847 NA +3131 chr4 + 190214555 100178825 100178824 100178890 66 ATGTATATACATATATATACATACATATATGTGTGTGTGTGTGTGTGTATGTGTATATATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...::...:xx.:....:..x.:x.:x..x:.:...........:...:......::..:...... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 72853334 NA +3049 chr4 + 190214555 100178833 100178832 100178922 90 ACATATATATACATACATATATGTGTGTGTGTGTGTGTGTATGTGTATATATATATATATATATATATATAGCTTACTTTGTAAGAACTA chr4 + 94230402 6857610 6857609 6857694 6857610 6857609 6857694 85 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA-----ATTTTTTTCTCTTATCTAGTCTGTGAAAATTA .:.....::.......:....x:.........x.......:...x.:x.x...-----..x.x.x.x.x.x:::..x.:...:.:..:.. 53M5D32M 59/85 69.4% 85/94230402 0.0% 5/85 5.9% 93321223 NA +3158 chr4 + 190214555 100178848 100178847 100178905 58 CATATATGTGTGTGTGTGTGTGTGTATGTGTATATATATATATATATATATATATAGC chr4 + 94230402 46063298 46063297 46063355 46063298 46063297 46063355 58 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGC ....:......:::.....:..x.:.::...x:..:...:.x......:......:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 54115550 NA +3136 chr4 + 190214555 100221853 100221852 100221922 70 CCCTTATTAGTAACTGGTTGCTTTTTTCTTTTCTGTTTTTTCTTGTTTGTTTTTTTTGTTTTTTTTGTTT chr4 + 94230402 73021684 73021683 73021749 73021684 73021683 73021749 66 CCCTGGTTAATAA----TTGTTTTTCTTCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTGCTT ....x:...:...----...:....:.::.x.xx.......:..........x....x.x.......:.. 13M4D53M 51/66 77.3% 66/94230402 0.0% 4/66 6.1% 27200169 NA +3364 chr4 + 190214555 100226758 100226757 100226840 83 TACCATTAAAAATCTGAGTTTACCAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGTTTTCCTTTTTCAGAAA chr4 + 94230402 55056245 55056244 55056327 55056245 55056244 55056327 83 TATGATAAAGGATTTGTGCTGGACAGGAAGCTTCAGGAGGTTGTTTTTTTGTTTTTTGGTTTTTTGTTTTGTTTTTTCAAAAA ..:x..x..::..:..x.:.x:x...:...:..:xxxxxx..x.......x...................x:.......:... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 45170513 NA +4010 chr4 + 190214555 100272594 100272593 100272679 86 TCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTATATATATACACACACACACAC------ACACACGTATAC-GTATGTATGTATATGTGCATA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATA ...x.....x.............x.x.x.x...:.:...........:.....------.:...:x....:-..x...::.:..:....:... 53M6I12M1I21M 67/86 77.9% 93/94230402 0.0% 7/86 8.1% 39441064 NA +4068 chr4 + 190214555 100272596 100272595 100272688 93 TCTCTCTTTCTCTCTCTCTCTCTCTCTCTATATATATACACACACACACACACACACGTATACGTATGTAT-GTATATGTGCATAGATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x...:.x.............x.x.x.....:.:..:........:.....x:x::x....:.x.:...-..x.:..:....:x:.:..... 71M1I22M 67/93 72.0% 94/94230402 0.0% 1/93 1.1% 39441066 NA +3552 chr4 + 190214555 100272598 100272597 100272668 71 TCTCTTTCTCTCTCTCTCTCTCTCTCTATATATATACACACACACACACACACACGTATACGTATGTATGT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.:...x.............x.x.......:.::.:........:.....x:x..x.:::..x...:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 39441068 NA +4208 chr4 + 190214555 100272600 100272599 100272690 91 TCTTTCTCTCTCTCTCTCTCTCTCTATATATATACACACACACACACACACACGTATACGTATGTATGTATA---TGTGCATAGATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.:.......::::.:........:.....x.x..x:..::.x.:...:---.....::.x:.:.:..... 72M3I19M 66/91 72.5% 94/94230402 0.0% 3/91 3.3% 39441070 NA +3563 chr4 + 190214555 100272602 100272601 100272691 90 TTTCTCTCTCTCTCTCTCTCTCTATATATATACACACACACACACACACACGTATACGTATGTATGTATATG---TGCATAGATATATATATA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATA .:.x.....x.............:.:......:::::.:........:...::x.x::x..::..x......---..::::x..:.:.:.... 72M3I18M 60/90 66.7% 93/94230402 0.0% 3/90 3.3% 39441072 NA +3086 chr4 + 190214555 100291763 100291762 100291806 44 GTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTTAAATTCACTCTA chr4 + 94230402 29689850 29689849 29689893 29689850 29689849 29689893 44 GTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAAATCCATCCTA ...x..x..x..........................:..::... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 70601913 NA +3644 chr4 + 190214555 100320775 100320774 100320880 106 TTTCCTCCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCCTTCTCCTTCTTTCCTTCCCCTCTCCTTCATTCCTTTCTCTCTCTCTGTCTCTCTCTCTTCCTTGAGAG chr4 + 94230402 63998162 63998161 63998265 63998162 63998161 63998265 104 TTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCT--TTCACCCTTTTACCCTTTAACCTCATTCTACCTTCTATGAAAG ......::.:..:.:x:x...:........:x..x:..........xx......:..x...--....::.:...x:.::.:xx:x..x:...x:....:x...:.. 61M2D43M 68/104 65.4% 104/94230402 0.0% 2/104 1.9% 36322613 NA +3095 chr4 + 190214555 100320804 100320803 100320856 53 TCCCTTCCCTTCTCCTTCTTTCCTTCCCCTCTCCTTCATTCCTTTCTCTCTCT chr4 + 94230402 71461388 71461387 71461440 71461388 71461387 71461440 53 TCTCATCACAGCTTCTTCTTTCCTCCCCTTCTCCTTCATTGCTCTCTCTCCTT ..:.x..x.xx..:..........:...:...........x..:......::. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 28859416 NA +3279 chr4 + 190214555 100352913 100352912 100352984 72 AAGAAGAAGAAGGAGGAGGAGGAGGAGGGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGG chr4 + 94230402 1818707 1818706 1818778 1818707 1818706 1818778 72 AGGAGGGAGAGTAAGCAGGAGGATATGGGAATGGAGAGGGGTTGGAAGAGGAGGAGTAGGAGACAGAGGTGG .:..:.:...:x:..x.......x:x.....x.::....:.xx.............x.:...:x:....x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 98534206 91680349 +3408 chr4 + 190214555 100361359 100361358 100361408 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATGTA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:...............:.:..:...:.....x.....:. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 98866353 91348202 +3212 chr4 + 190214555 100361364 100361363 100361481 118 AAAAAAAAAAAAATATATATATATATATATATATATATATATGTAGCTGTAATCATTTAT--------TAATTTTAATTCTGATCTTTTAAAATTATTCATGTTTATTTATTTCCAGTAAGTTTGA chr4 + 94230402 58988593 58988592 58988712 58988593 58988592 58988712 120 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATGACAAATTTATTCTTA--CTGTCAATTTAATACATGTGTTTTCAACT----TAAATTTGA ......:...xx...........:.:.:..:......x.:....xx.x:...x.......--------:..x....x.::.:--..x.:..xx.x..x.....x.x..:.x:.----...:..... 60M8I14M2D29M4D9M 80/112 71.4% 120/94230402 0.0% 14/112 12.5% 41372771 NA +3028 chr4 + 190214555 100378890 100378889 100378989 100 AGTTTCTCTTTTCTTTTCTTTTCTTTTCTTACCTTTTCTTTTCTTTTCTTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC chr4 + 94230402 49829807 49829806 49829906 49829807 49829806 49829906 100 AGTTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCC .........:.xx....::.xx:xxxxx..x.x......x.xx:..x:....x:..x..:.....:...::.:.:........::..::..:::...::. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 50549083 NA +3135 chr4 + 190214555 100378898 100378897 100378976 79 TTTTCTTTTCTTTTCTTTTCTTACCTTTTCTTTTCTTTTCTTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT chr4 + 94230402 38120984 38120983 38121062 38120984 38120983 38121062 79 TCCTCTTGCTCTTTTTGTTGTTATCTTTCCACTCATTTTCATTTTTTCCATCCCTTCCTTTCATTTCATATTCCTCCTT .::....x:::...:.x..x...:....:.x:.:x.....x.....:.:x...:........x....x.x.:.:.:.:. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 62257914 NA +3214 chr4 + 190214555 100378907 100378906 100378963 57 CTTTTCTTTTCTTACCTTTTCTTTTCTTTTCTTTTTTCCTTTCCTTTCCTTTCCTTT chr4 + 94230402 53879525 53879524 53879581 53879525 53879524 53879581 57 CTATTCTCTTCATACCAATATTCTTCTTTTCTGTTTTCCTTTCTTTTCATTTCCCTT ..x....:...x....xx.x:.:.........x..........:....x.....:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 46499382 NA +3141 chr4 + 190214555 100396502 100396501 100396560 59 TCTAGGTGTGCTGGGACTTTCTTTCTTTCTTTTTTTTCCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 71065821 71065820 71065879 71065821 71065820 71065879 59 TCTAGGTGTCACGTGGCAGTCTTTCTTTTTTTTTTTTCCTTCCTTTTCTCTTTTAATTT .........xx:.x.:.xx.........:............::....:.:....xx... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 29330681 NA +3029 chr4 + 190214555 100396530 100396529 100396573 44 CTTTTTTTTCCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTT chr4 + 94230402 52752937 52752936 52752980 52752937 52752936 52752980 44 CCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATT .:......:......:...............:.x.....:.x.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 47643593 NA +4779 chr4 + 190214555 100410263 100410262 100410378 116 ATGAAATTGGGAAACTTACGTAATTATTGCCTAGGTGTGGAGAGAATTCCTCAAGCTGTCAGTTCTTGGTTTTTCCTTGTGCAGAGTGCTCACCT-GAGAACAGAAGATATGTTTTG chr4 + 94230402 61831567 61831566 61831683 61831567 61831566 61831683 117 ACAAAAGTGAGAAACTTACATATTTATTGCTGAAGTTTGAAGAGGAGTCATCACATTGTCGAGTTTTATTCTTCCCCTGAGATGAATTCTCTCCTAAAAAACAGAAAATGTGTTTTG .::...x..:.........:..x.......:x.:..x..:....:.x..x...x::....::x.:..:x.:..:..:..x.xx..:.x...x...-:.:.......:..:....... 95M1I21M 80/116 69.0% 117/94230402 0.0% 1/116 0.9% 38578696 NA +3072 chr4 + 190214555 100416075 100416074 100416129 55 TGTGTGTATATATATACGTGTGTGTGTGTGTATACATACATATATATATATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..:...:...:..:.......:.......x.x:.::..::.:.:....... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 44721621 NA +3004 chr4 + 190214555 100455261 100455260 100455346 86 GTAAACCTTCCATACATTTTTGTTATTTTATCTTTAAACAATAAATTGTCTTTTGAAGAGACTAAAAATGAGATAAAAGTCTTTCA chr4 + 94230402 27438480 27438479 27438565 27438480 27438479 27438565 86 GTAAGCCGTTGATACAATATAGTGTGTTTATGGCCAAATAATGGGCTGTTTTTTAATGAGAATAATAATGAGATTAATGTAATTCA ....:..x.:x.....x.x.x..xxx.....xx::...:...::::...:....:.x....x...x........x..x..xx.... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 73016781 NA +3286 chr4 + 190214555 100512666 100512665 100512734 69 CATGGTGGTGGGTGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::......x::..--...:.:...........::........x.xx.x...x.:.........:.:. 15M2D52M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% 24479469 NA +15324 chr4 + 190214555 100517957 100517956 100518273 317 GGCAGGGACAATTCCCTCCCAGCCTGGCAGGGCCTTATTAGCAAATGGAAAAGGTGTAGTGAATGTGAATAGCCACTGCCCATTCCTACTTATTTTGGGGGCTCTGATAAAGAACGGGAGGAAATACA-CACACTCCCTTTGGGAGTTCAGCAGAGAGGAGATTTATTGTTTCAGTCCCTTACAGGAACTCTTTTTTTTTCTCTCTCTTCCTTTGGCAGCCACTTGTGTTTTTGTTACTACATTATTTTGTTCTTCTTCAACAGAAAGGTCGGGACTGGTTTTGAACAGAAACAGATCCTTCTTGAGAATGGATCATA chr4 + 94230402 61895498 61895497 61895788 61895498 61895497 61895788 291 GGCAGGGAGTGCTCCTGTAGACTCTG-CGGGCCCTAATTACTCCATGGAGACAGTGCC-----------TCGTCACTGCCCATTCCTGCTTATTTTGGGGACTTTGATAAAGAACAGGAGGAAACACAGCATACTCCCTCTGGGAGTTCAGCACAGAGGAGATTTATTGTTTCAGTCC-TTACAGGAACTCCTTTT--------------CTTTGGCAGCCAACTGTGTTTTTGTTAATACGTTATTTTGTTCTTCTTCGGCCAAGGGGTCAGGGAAGTTTCTGAACAGAGGCGGATCTTTCTTTAGAATAGGCTATA ........xx::...:x:xx.x:...-.:..x...x....x:xx.....:.x:...:x-----------.x.:..............:............:..:...........:........:...-..:.......:.............x........................-............:....--------------............x:.............x...:.................::.x:.::....:..:xx.x..:........::.:....:.....x.....:.:::... 26M1D31M11D59M1I49M1D17M14D108M 231/290 79.7% 291/94230402 0.0% 28/290 9.7% 38622459 NA +15324 chr4 + 190214555 100517957 100517956 100518273 317 GGCAGGGACAATTCCCTCCCAGCCTGGCAGGGCCTTATTAGCAAATGGAAAAGGTGTAGTGAATGTGAATAGCCACTGCCCATTCCTACTTATTTTGGGGGCTCTGATAAAGAACGGGAGGAAATACA-CACACTCCCTTTGGGAGTTCAGCAGAGAGGAGATTTATTGTTTCAGTCCCTTACAGGAACTCTTTTTTTTTCTCTCTCTTCCTTTGGCAGCCACTTGTGTTTTTGTTACTACATTATTTTGTTCTTCTTCAACAGAAAGGTCGGGACTGGTTTTGAACAGAAACAGATCCTTCTTGAGAATGGATCATA chr4 + 94230402 61878141 61878140 61878431 61878141 61878140 61878431 291 GGCAGGGAGTGCTCCTGTAGACTCTG-CGGGCCCTAATTACTCCATGGAGACAGTGCC-----------TCGTCACTGCCCATTCCTGCTTATTTTGGGGACTTTGATAAAGAACAGGAGGAAACACAGCATACTCCCTCTGGGAGTTCAGCACAGAGGAGATTTATTGTTTCAGTCC-TTACAGGAACTCCTTTT--------------CTTTGGCAGCCAACTGTGTTTTTGTTAATACGTTATTTTGTTCTTCTTCGGCCAAGGGGTCAGGGAAGTTTCTGAACAGAGGCGGATCTTTCTTTAGAATAGGCTATA ........xx::...:x:xx.x:...-.:..x...x....x:xx.....:.x:...:x-----------.x.:..............:............:..:...........:........:...-..:.......:.............x........................-............:....--------------............x:.............x...:.................::.x:.::....:..:xx.x..:........::.:....:.....x.....:.:::... 26M1D31M11D59M1I49M1D17M14D108M 231/290 79.7% 291/94230402 0.0% 28/290 9.7% 38639816 NA +3184 chr4 + 190214555 100582142 100582141 100582247 106 TTTCTTTCTTTCTTTCTGTCTCTCTCTTTGTTTCTCTTC--CTCCCTTCCTCCCTTCCCTTCCCTTTTCTTTCTTTCTTTCTGTCTTTCTTCTTTCTTTCTTTCTCTC chr4 + 94230402 50083280 50083279 50083387 50083280 50083279 50083387 108 TTTACTGCCTCCTCCTTGTTGCTATTTTCTTCTTTATTAGATTCCCTTCCCCCCAGCCCTTCCCCCATGGCTCTTCATTTTCCATTGTCTTTTTTCTTTATTTCTCCC ...x:.x.:.:..:::...:x..x.:..:x.:.:.x..x--:........:...xx........::x.xx:....:x...::xx:.x....:.......x......:. 39M2I67M 67/106 63.2% 108/94230402 0.0% 2/106 1.9% 50498862 NA +3054 chr4 + 190214555 100602335 100602334 100602416 82 AAACATTTACACCATGCTTTCTGAAACCTCGTTTCAGGTCAAATTATTTTATATATTTTCATAATTTATTTTATTTTTACAA chr4 + 94230402 56752278 56752277 56752359 56752278 56752277 56752359 82 AAGTATTTTTGCTATGCTTTTTGAAAAATCAATTCAATTCCAATAATTTTGAAAACTTTCAAAATTGAGTCAATTTGTAAAA ..::....x::.:.......:.....xx..:x....:x..x...x.....:x.x.:.....x....x.x.:x....x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 43850057 NA +5393 chr4 + 190214555 100645442 100645441 100645729 288 TCTCTTTCTTTCTCTCCCTTTCTCTTTCTCTCTCTCTCTCTCTCTATATATATATAGATATAGA-TATAGGTATATATTTACATATCTCTCTCTATAGAAATATATATACTTATATATATTTATAGATCTATAAATATATATACTTATATATATTTATAGATATCAATATATAGATCTATATATTGATATCTATAAATATATATGTTA---TACCTATATATTTATAGATATATATATTTATATTTAATTATATTTAAATATATATATTTAATATTTATTTATATTTATATT chr4 + 94230402 4618344 4618343 4618585 4618344 4618343 4618585 242 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-------------------------TATATAT-----TATATGTT----GTACTAATAATACGGAGATAGATAAGGATTTATCTAT-----------GCTTCGTATTCTATtatatatatatatatgtgttagattacatataca---atacatatatacatatatatata--tgtatgtatataAAAGAATGTAATATTTGCTTCTGTTGAAGTT .:........x:x.:::x.:......:..............x:....::......xxx....x.-.....:.....-------------------------.......-----.....:..----.xx...xx....::x.x.:xx...x:x......xx..-----------.x.:::...x:.:x...x....x......:.....---...x....:.---...x.......:..x.....x..--.:...x..x...x.x:x..x........::..x.:..x.x:.. 64M1I11M25D7M5D8M4D37M11D35M3I10M3D23M2D43M 170/238 71.4% 242/94230402 0.0% 54/238 22.7% 96027098 94187457 +3079 chr4 + 190214555 100645464 100645463 100645570 107 TCTTTCTCTCTCTCTCTCTCTCTATATATATATAGATATAGATATAGGTATATATTTACATATCTCTCTCTATAGAAATATATATACTTATATATATTTAT----AGATCT chr4 + 94230402 60831530 60831529 60831637 60831530 60831529 60831637 108 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT---GGTCTGTGCGCATGTGTGTATATTTCTCATAAGATCT ...x.....x.............:.:.......:x:....x.:.:.x.:.:.:x.:..x...:x.:.x.x.---.:xx.:.::::.:x.:.:.......x.----...... 71M3D27M4I6M 69/104 66.3% 108/94230402 0.0% 7/104 6.7% 39813934 NA +7600 chr4 + 190214555 100657251 100657250 100657415 165 GAATGCCAGGATTCAGCAACTCTTCTGGGTGAGTAGGTG-ACCAAAAACAATGATCTCTGGTTCCATATTCATTTAGGAATGTTGTACTTGGCACAATGGATTTCCAGTGGCTAAAGGCTTATTTCCTTAGGTCAACATACCATCTGGCAGTTAACAAAGACTTTC chr4 + 94230402 61918467 61918466 61918630 61918467 61918466 61918630 164 GGACATCAGGGTGCAACGGTTCAGCTAGGTGAAGAGGTGGACCATAAACAGTGATCTCTGCTTCCATATTTACTTAGGAATGCTATACTTGACAGCACG--TTTCCAGTAGCGGAAGACTGACTTCCTGATGTCAATATGATATTTGGCAGCTAACACGTACTCCC .:.:::....:.x..:.:::..xx..:.....:x.....-....x.....:.........x.........:.:.........:.:......:..xx.:.--........:..x:...:..x.:.....x.x.....:..:x:..:......:.....x:x...::. 39M1I59M2D65M 118/163 72.4% 164/94230402 0.0% 3/163 1.8% 38738784 NA +3147 chr4 + 190214555 100665833 100665832 100665888 56 TATATACTATATATATATACACACACACACGTATATACTATATATATACACACACA chr4 + 94230402 34434455 34434454 34434510 34434455 34434454 34434510 56 TGCATGTTAGAGACATATTCATACACACAGGTATATATTACATATAAACACACACA .::..::..x.x.:....x..:.......x.......:..:.....x......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 66231378 NA +5122 chr4 + 190214555 100675144 100675143 100675291 148 TCCTTTGTTTGGAAGTGTCTTGGTCTCCTAGCAACATCATAGGGAAATCTATCAGGGATATGAAATTAAATGGCTATGTAGGCGGAATACCTGTAGAGTGTTCAG---TTCTATGAAAAGCTTTCACTAGAAATTATATACATATTGTGCA chr4 + 94230402 61930268 61930267 61930411 61930268 61930267 61930411 144 TCCTTTGTTAGGCAGTATCTTCATCTCCTAGCAACAGCGTGGGGAAATCCACCAGGGACATGGAATTTAACGGCAAGATACGGTGGCTCACTGTA----GCTCAGGCATTTTTTGAAA--CCCTCACTGACATGCAAATACCT-TTGTGCA .........x..x...:....x:.............x.:.:........:.:......:...:....x..:...x.x:..x.xx.:x.xx.....----.:....---..:.x.....--.::.....::x.xx:.x....x.-....... 95M4D6M3I10M2D23M1D7M 104/141 73.8% 144/94230402 0.0% 10/141 7.1% 38744876 NA +3019 chr4 + 190214555 100676131 100676130 100676183 53 TTTTTTCTTTTCTTTTCTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAGTC chr4 + 94230402 63257034 63257033 63257086 63257034 63257033 63257086 53 TTTCTTCCATTCTTTTCAGTGCTCCATTTTTTTCTTTTTTTCTTTTTTTAGTC ...:...:x........xx.x..:.x.......:.......:......x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 37419097 NA +3455 chr4 + 190214555 100701168 100701167 100701229 62 ACACACAGAGACACAAACACACACACATACATATATATGTGTGTGTGTATGTGTATGTTTTA chr4 + 94230402 44243253 44243252 44243314 44243253 44243252 44243314 62 atatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGATTTA .:.:.:.x.x.....:...........:..:.:.:.:.......x...:.:.:....x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 56457915 NA +3505 chr4 + 190214555 100735422 100735421 100735463 42 TCTCTCTTCTCTCTCTCTCTCTCCCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..:................:.................. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 25487375 NA +3291 chr4 + 190214555 100735424 100735423 100735465 42 TCTCTTCTCTCTCTCTCTCTCCCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.:...............:.x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 25487377 NA +3094 chr4 + 190214555 100735429 100735428 100735463 35 TCTCTCTCTCTCTCTCCCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ................:.......:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 88134124 NA +10433 chr4 + 190214555 100737002 100737001 100737332 331 TGAAGATGAAAGAGCAGAATGGCATTTTAATCATTCTTAAGCAG-GAAAAAGATAACTATTTTTTTTTAGCATGGAAACTTTCCACTTTTAGTAAG-----AGAAGATTGAGAGAAGGCAGAGTACA--CTGTCAGGTTCAATTAATTGTTGAAACCAAACAAAAATAGCCTCTCATGGTTCCCATTGTTCTGCAGCTGTTGGCTTCATAATGCCTGTTGTCTCCTTCCTTATGACTAATCATCATGGTTGCCCAGTTTCCT-TTCTTGATTTTCTACCAGAAGTTGTGATGTGTCATAGGAAGAAAGGGCAACCCTCCAAGA-ATTTCTTTCCAGGTCTT chr4 + 94230402 61936962 61936961 61937299 61936962 61936961 61937299 338 TGGAGATTAAAGAGAAAATTATGATGATAATCAGCTTTACAAAGAGAAAAGGAAAGCCGTTTCTCTTTGG---GAGAATTTCCAGCATTTGAGAAGGGGGGAGAAGGTGGGGAGGGAGCACAGTAAGGTCTCACATGTTCAATTGATTGTTCACATCTAACAAAAATAGCCCCAGCCTGCTCCCATTGTCCTGCAGCTGCTGGCTTCATTATGCTCATTGTGCGTTGCTTCGTGGCCGAGCAGGATGGTTGCCCAGTTTCCTCTCCTTCATTTCCTAATGAGATCTGCGATGAACAGAAGGAAGAGTCAGCAACACTTCAAAACAATGCCTTGCAAGCTTT ..:....x......x.:.x.:xx..xx......x::...x:x..-.....:..x.:.::...:.:...:.---.::..:..:.x:.x...::x...-----.....:.x.:...:::...x....x:--..xx..x........:......x.x.:.x.............:.xxx:x.:.........:.........:.........x....:::....x:x:.x.:.::..:.::.x..xx..................-.:...x....:...x::::.x:..:....x::x:x.......:xx:.....x..:...:.-.x.x.:..x..:.::.. 44M1I25M3D23M5I26M2I133M1I60M1I17M 219/328 66.8% 338/94230402 0.0% 13/328 4.0% 38800040 NA +4224 chr4 + 190214555 100771056 100771055 100771219 164 AGGAAGGAAAGAAGGGAGAAAGGAAGGGAG-------GGAAGGTGGGAGGGAGGAAG---GAAGGAGGGAAGAAAGGGAGGGAGGGAGGGAGGATAGGGGAGGAGAGGGGAGGGAGGGAGGAAAGGAAGGAA---AGAAGGAAGGAAGGAAGGAATGGGAAGGAGGGAGGAAGAAAA chr4 + 94230402 32265486 32265485 32265662 32265486 32265485 32265662 177 AAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA .:.::..:.x.x......x.x...::....-------.::::...x.....:..:..---.::.:...::.:x:x:x.x.x::x...:...:..x.:.:.........:..........:...:.:..:x..---....:x.:.xx..x.:xx:..xx...:x..:..::...:.:. 30M7I20M3I72M3I42M 101/164 61.6% 177/94230402 0.0% 13/164 7.9% 68505570 NA +3217 chr4 + 190214555 100771171 100771170 100771323 153 GAAGGAAAGAAGGAAGGAAGGAAGGAATGGGAAGGAGGGAGGAAGAAAAAAAGAGGGAAAGTAAGGAAAGGAAGGA-------------AGGAAGGGAAGGAAGGAAAGGAAGGGAAGGAAGGAA--AGGAAGGAAAGAAGGAAGGAAGGAAGGGAGGAAGGAAGGAA chr4 + 94230402 91773928 91773927 91774095 91773928 91773927 91774095 168 GGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAA .:...x..:.x.....:.x::x::::.:.......x.xx::..::...x:x.x...:.x....:.:.x....::..-------------.::x:.:....::.:x.:.x..:.:x...x..:...--....:::..xx:.:....:..:x.x:..:.:..::.:.... 76M13I36M2I41M 88/153 57.5% 168/94230402 0.0% 15/153 9.8% 8997243 NA +3579 chr4 + 190214555 100794950 100794949 100795009 60 TTCTTTTTCTTTTCTTTTTTTTTTTTTTCCTGTAGAGAAAGAGAAGCAGGAGATTGAGGA chr4 + 94230402 17334307 17334306 17334366 17334307 17334306 17334366 60 TTCCTCTTCTTCTCTTTTTTTCTTCTTTCCTCTAAGAAAGGAGAAGCAGGGGGCTTGGGA ...:.:.....:.........:..:......x..:::..:..........:.::.x:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 83460643 NA +24113 chr4 + 190214555 100804392 100804391 100804919 528 AATTTCCATAATACATTGCCAAGAGAGTATAACTGTTATCTATGTAAATGTTTGTGGTAATATACTAAAATAGGAATTTACTACTTCAGTTATGCTTCTGATAACATCATTTCATTTTGGATCATTCAA-------AGACAGTTGGGTCCTTGATTATAAGACACACTGTCTCTATTTCTAGAAAAATAAAGTAAAATAAAAAAATATGCTTCTAAAGAATTGTTTATCACTTGATAATTACAGAGCCCTTGAAGCTATTCTCTATATTTCAAGAACTCTTATTTTTTCCCTCGGGATCAAGCAGTTCTTTGTTTTAATTTATTTTCCTCTTAAATACCTCCTGCTATTTAAGCAATAATTCCTTCCAAATCAATTGTTAGCAGCAGTTAATGAATGGTTGGTTAATTAATAGCTCAAAGCAAAGCTGAGGGTGTTCCATGTTCTAACAAACCACCAGAGTCTAACTGGGGTATTATTGTTACTATACCCTGTAATCAGTGGCTTCTCACAGCATTGTGG----CTACGTATTATTTTA chr4 + 94230402 61946362 61946361 61946876 61946362 61946361 61946876 515 AGTGTCCATGACACTTCTTGGAGAGACTGCAGCTGCAAT-----TAAACATTTTTGATAACTCATAAATATAA-CATTAGTTGCCTGGGTTAGGCTTCTGATAACATCATT-CATTTCAGATCATTCAATTAGTGCAGACAAAGGGGTTTCTTTCTAGGAGACATAATGTCATTGTCTCTGGAAGGG----------------AACGCACTTCCCAATGATTGTTTATCACTCTGTAATTATAGGGCTGTAGCAGCCATTCTCTATATTACAAGGAGTCCT-TTCTGTGCCCAAGGATCCAGCAGTTCTTTGTTTTAATTTATTTTCCTCTTAAATACCTCCCGCTATTTAAGTGATAATTCCCTGCAAATCAATTGTTAGCAGCAGTTAATGACTGGTTGGTTAATTAATAGCTGAAAGCAAAGCGGAGGGTGTTCACTGCTCTAACAAACCATCCAATGTTAACTGTGGTATTGTTGCTAATGTACCCTATAATCAATGACTTCTCACGGCAGTGGTGTAGCCTATATATCACTTCA .:.x.....:.:..x.:x:x:.....x.::.:...:x..-----....::...x..:...:x:.:x..x...:-x...x::.:.:.x:....x..................-.....::..........-------.....:xx....:::.xx:..x:.....:.x....x:.:.:...:...:::----------------..::::....:x..x:.............:x:......:..:..:x.x.x...:............x....:.x..:.-..:.x.x..:x:.....x..........................................:..........::........:.x............................x....................x..........x..........xx..:............:.x:.xx:......x......:...:..x.:......:......:..:........:...x..xx.----...::...:.:..:. 39M5D29M1D37M1D17M7I51M16D78M1D238M4I15M 382/504 75.8% 515/94230402 0.0% 35/504 6.9% 38858030 NA +3121 chr4 + 190214555 100828308 100828307 100828391 84 TATATATATATATATATATGTATGTGCATATATGTGTGTATATACATAGATACTAATATATATAAAATACCAACATTTAAATAA chr4 + 94230402 65759986 65759985 65760068 65759986 65759985 65760068 83 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAATAGGATTTACGAA-GGCTAAATAA ..x..x.:.:x:...:.....:........:....x...:........x:.....x.xx...x:.xx...x..-:x:....... 73M1D10M 59/83 71.1% 83/94230402 0.0% 1/83 1.2% 35068322 NA +13471 chr4 + 190214555 100834027 100834026 100834539 513 CTAGGCCAAGAAAATACAGAA------------TTTACCATAGAGATGAAATTCTTTTACTTCAAGGAGAGAAAT---ATGAAAAGAAACAACATTTGAA-------------AAATGCTGATGAAATGTAACTTTTTCTCATAATAATTTTTTGGCATTTAT-GACAAAGATCCTCTGTTACTTACAACTTCCAGTGATTTTCATTCTTGGCTTAGTTGTAACCCAAAGAACTGACAGCGAAGGAATATTAATATATCTCTGAGCAGTGAGGGAGCTGTTCTTAAAGTGATACAAAGGCAATGAGAGTTTGGAACACCTCATATTTCAATGAAATTCAATTTTCTCTTACAGGTTTCACTCAGTAGCAAGAAGGCACTCATATTGTTATGCTT-AGATTCTA-ACAGCATTTATAAA----AGAGTAAATACACTCTGCAATGTTTAGAGGTTTTGTGTTACTTGCAAATGTACTTTCTTCTTGTCCAGTTCCAGTGAATTCTAACCACTGAG-GCAAGACCCCAGACTTCCAGTGATTTGTAGAGAA chr4 + 94230402 61961008 61961007 61961539 61961008 61961007 61961539 532 CCAGGCTAAGCTGACACAGAAGGTTCAGCGAGTTTTATAACAAACTTAA-----TTTCACTTTAGAGAGAGAAGGTGGGGGGAAGACAACAACCTGTGATTCTCCAAAAAAATAAATGCTGATTAAATATAACTTGCTC-CAGAAAGATTTGTTGCCATCTCTTGACAAAGATGATCTGGTGCTTGCAGTTTCCACTGAATTTCATTTCTATTGTAGTTGAACTTGGGGGAAGTGACAGGGGAAGGATATTAATACATCTTGGGGGTGAGAGGGAGTTGTTTTTCAAGTGTGACAGAAGCAATGAGTGTTTTGAACACCTCATACTTCACTGAAATCCAATTTTCTATCACAGGCTTTGCACTAAAGCAAGAATGCGCTTGGAAGTTGGAGCCTGAGATGCTACGTGGCATCCATAAACCATACAGGAGATG--------AATGCTTTCTCTTCCTTTGTTGCTTGAAAATGCACCTTCAGTCTGT--GGCAAGGGTGAATGTGAGCC-CTGAGTGCAGAGCTTTGTCCTCTGAGGGTTTTGTACAGAA .:....:...xx:.:......------------....:x.:.:.xx.:.-----...:....:.::.......:x---:x.:..::x......x.x...x-------------..........x....:......x:..-..x..x:....x...x...:.x.-.........xx....x.:...:..::.....x...x.......::.:x:x......x.x::x:::...x......x.:.:.:.........:....:x.:.xx.x.......:....:..x.....xx...:.:........x....x............:....x......:.........x.:.....:..::.x.x:x........x..:..::x.xxx.x:x..:.-....x...-:::....::.....----.x..x.:..:--------....:..xxxxx.::.x....:....x.....:..:...xx::...--:.:xxx:......x:x.:..-.....-...:::.::::xx..::x..x.x......x.... 21M12I16M5D21M3I22M13I26M1D23M1I230M1I8M1I14M4I10M8D46M2D20M1D5M1I34M 337/496 67.9% 532/94230402 0.0% 53/496 10.7% 38873019 NA +5545 chr4 + 190214555 100837021 100837020 100837169 149 GTTATATAAAACAGGGTTGATTGACCTGCCTGTGATGGTAGCAGGAATTTGTAGCTTTGTTCTGTTAATCAGTGT--GTGCACTCAGTTGAGGATTAGCAGAAGTTGCCAGTTGCATTAGCACTGAACCTGAGCTTCCTCAACCACTAGGG chr4 + 94230402 61962472 61962471 61962621 61962472 61962471 61962621 150 GTTACTTAAAACAGGGATGGT-GACCTGAATGCAGGAGCTGCTGGAGCTCAAAGCTTTCTTTTATTAATCAGTTTTCATGCGTTTAGCTGAGGATTAGCAGAGGCTGCCAGCTTTATCAGCATTAATTTAGAGTATCTTGAAGTATCGGGG ....:x..........x..:.-......xx..:::x:.:x..x...::.::x......x..:.:.........x.--:...::.:..:..............:.:......:.x:..:....:.:.x::x...:x..:.x..x:.:::... 21M1D53M2I74M 99/148 66.9% 150/94230402 0.0% 3/148 2.0% 38874549 NA +17210 chr4 + 190214555 100849075 100849074 100849639 565 GCCTCACTTGCAGTCTCATTCCTAACCCTCAACTTGTGGCCTCCTTTATCACACCC----------TACAGTTTCTAAATTGCT----------------TTGCAGGATTTTCTAAGGACTATTCTGTGAGAACATCTTGGGCT-----GCTGGATGTGTGCATGCACTTGCACAAATA-TGAAACAGAGAGCTGGTCCAGGCAGAAGGACTTACATATTTTTTTCTCAAATAACATATTTGAGTATTAAAAGCAATGTATTCTGTTCTCCTGCTAACAAAGAATAATAAAACCAGAGTGTTGCCTTCCCAGCAGCTCTTGCCTT----------TGAATCGTGCAAAGCAGAAATGATCCTTGGTTTGTAGGCAGCAACAGCCTCCAGAAGCTATGGGAACATTGCCAAGAGCCCTGAAAAACCTCCACAGCTAATTGGGAACTGGCTTATTAGTGACACTTTTGAGAGTCAGGTTGTCATTGAAGAGAAACGAAGGAGAACACAGTGGGCGCTGTAGCCTGGAATTAGGCAGTGGGAGGAGGGAGGGCTGGTCCCTGCTCCTTGCAAGAACATTGCTCTGTAATTTTCTCAAAC--AGTGTGCTCAG chr4 + 94230402 61967994 61967993 61968583 61967994 61967993 61968583 590 GCCTAAAGAGAAGCCTAATTCAGATGCCTCGGTATGCAGCCTTTTTTATTACACCCACAAACCACCCACAACCTCCAAATTGCTATTCTTTAGAAACACCCTGCAGCATTTTCTGGTTTCCAAAATACAGGAGTGCTGTAGGCTTAGCTGCTGGATTTGTGCATGCACATGCAAAAATAACTAATGGGGGAGCTTGATCAGACAGCAGGA--------TTTTTTCCTCAAATGATACATTTTAGTATTAAAGTAAATGTATTCTGTTATCCTGCTAGCGTGGAATAATGAAACCGGAGCTTTTCCTTCCCAGCTTTTTTTTCCCTTTCTCTCCACTGAGCCTTACAAAGTAGCAACAATTCTTGGCTCGTAGGCTGCAGCAGCCCACAGAAGCTTTGAGAACAGTGTCAGAAACCT--ACAAACCCGCGCTGTTAATTGGGGACTGGGTTGCTGGTGACGCTTTGGAGCACTGGGCTGTCATTTCAAAGCAGCAAGGT---GCTTTGCAGATGCCAACGCCTGACATTTAGCAGCAGAGGGTGGATGGG------CCTGTACCACTGAGGCAGAGCATGCTGCAGTCTTTTCCAGCAGAGAGTGCTCAG ....x.xxx.x..:..x....xx.xx....:::x..::....::.....:......----------:...:::..:........----------------:.....x.......::xxx.:.xxx.::::..:::::x.:....-----.......x...........x....x.....-:x..xx:.:.....x.x:...:...x....--------......:.......:.:.:....x.........:xx.............x........:.:x:.......:.....:...:x..x..........xx:.:..x..:.----------...::.x.:.....:..x..::..:.....:.:......x...:.....:x........x..:.....x..:..::.:..:--.x.....:x.:.x.:........:.....x..::.:.....:....x...x::::..:.......xx.:..x.:.:.:.x---:.x:x.::.::..::xx.....:x...x:....::.::..x..:x...------....:x..x:xx.:.x.x.x:::x...:.:.:..:..x.:.--..x........ 56M10I18M16I44M5I30M1I30M8D107M10I81M2D80M3D48M6D41M2I11M 367/546 67.2% 590/94230402 0.0% 63/546 11.5% 38881081 NA +3140 chr4 + 190214555 100915245 100915244 100915332 88 TCTGTATTTGTGAAGAATTAGATTCCTTTCTTTTTTTCTTCCTTCTTTTTTTTTTCTCTGTTTCATTTTTTTTTCTTTTGAGACAGGA chr4 + 94230402 59557933 59557932 59558013 59557933 59557932 59558013 81 TCAGTAACTGTG-----TTTGATGTGTTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCT--TTTTGTTACAGGA ..x...x:....-----..x...x:x.....:x...:..:..:..::........:...x..:.:......:.--.....xx...... 12M5D56M2D13M 60/81 74.1% 81/94230402 0.0% 7/81 8.6% 41357312 NA +9126 chr4 + 190214555 100925793 100925792 100926072 280 AGTTGTTGCAGAAATGCCACACCAAAAATCTCT-GTGTTAATTGCTTACCCTTCAGAGACTTTAAAAATGGCTTTATCGTGGTGAATTATACAGGCTATAGAAGATGGTTCATTTATAAAGTTCATATAAATGATGCATTGAGAAAGGGTTTTTTGTTCTGGTTGATAAAAGTTAATCAAATGCAAGATGGCATAAAGCAATTTAGCATAAATCTTCCACA-GAGCACTGCTTAAGCCTCCCATCTCCCAAGTAGAGAGAACATTTATCTGACTATTTCTAA chr4 + 94230402 61972049 61972048 61972307 61972049 61972048 61972307 259 AATGGTTGGAGAAATTTCATACAGAAATGCTCTTGTGCTGGTTGGTTATCCCTTTGAGGTTCTCTGCATGGCCTCATTGCGT-----------GGCAGCAGCAGGT----CATTTATAAAGCTCATATAAATGACGCATTTGGAAAGTGCTTCTTGTTCTGGTTGATAGAAATTAACTGTATGCAAAATGGCATACAGCACCTCATCCCATATCTGCCTTGTGAG------GTAAA--TATCACCATCCAAGTAGGAAGATCATTTATTTGGATATTTCCAA .:.x....x......x:..:..x:...xx....-...:.::...x...:..:.:x...::.:.xx:x.....:.:..:.:.x-----------...x::..x..:.----...........:............:.....x:.....x.:..:...............:..:....:::x......:........x....x:.:.x.x:.x....x..x::-...------x...:--.x:..:.x:........::...x.......:..:x......:.. 33M1I48M11D13M4D111M1I3M6D5M2D44M 182/257 70.8% 259/94230402 0.0% 25/257 9.7% 38953744 NA +3119 chr4 + 190214555 101001936 101001935 101001981 46 ATATTTCAGGTTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 68982944 68982943 68982989 68982944 68982943 68982989 46 ATATTTCAAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTT ........:.xx....x.......:...:...:............. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 32018992 NA +3033 chr4 + 190214555 101010180 101010179 101010255 76 TTGAGCAAGAAAGTCTGGGCCTTAAAAAAAAAAAAAGAAAGAAAGAAAAATGAAATAGCAGAAAATTCCTTTCTTA chr4 + 94230402 75160283 75160282 75160358 75160283 75160282 75160358 76 TTGATAACTAGAGCTAGGCTCCTAGAGAAAAAAGAAGAAAGAAAAAAAAATGGAAACCAAGCTAATTTCTTTTTTA ....xx.xx.:..::x..x:.:..:.:......:..........:.......:..xxxx..xx....:....:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 25849897 NA +4254 chr4 + 190214555 101010198 101010197 101010276 79 GCCTTAAAAAAAAAAAAAGAAAGAAAGAAAAATGAAATAGCAGAAAATTCCTTTCTTATGCATAATTTTTAAAAATAAC chr4 + 94230402 14052313 14052312 14052387 14052313 14052312 14052387 75 GCATTAAAGAGAAAAAAAGAAAAAAAAAAAGATGAAACAGCAGAAAATACATTTCTT----ATCATCTTCAGAATTAAC ..x.....:.:...........:...:...:......:..........x.x......----..x..:..:.:..x.... 57M4D18M 61/75 81.3% 75/94230402 0.0% 4/75 5.3% 86957885 NA +152657 chr4 + 190214555 101024311 101024310 101029362 5052 GAAGGATGAGAATTCTGTAAGTTCATGCACATTTT-ATTGAGTAGTAATATAAAATGCTTTTTCTTTTTCATTGTTACAAGTGCATGCTTT-GATTGCCAACATGTCAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAATTGTTAAAAAATATGAATGGAC--TTTTGTTG---TTGTTGTTTTCAGAATGAACCAGTTGTAACCCGTAACTGATATACAAAGGGAAAAAAGTGAAAAAAGTACATATTTTGTGGCACATGACAGAACAGAACAAAATAACTAAACTGTTATGACATTAACAGTTGCCATGCATTTAGAGTTTCACATGTAACTACAAACTTATTATAATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTATGTTAAAAACTTTAAAGAATACTCTCCCCTTTAGATTTTTTCAAAGCTTTTTTTTGATTACAAAATTTCAAAGGCATTAAGCATTTT-----AGAGAATATAAAGTACGCCAGTATACATACATTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCCATTTTTTTTTTCTTAAAAAACATGCATAGGCAGATTTTTTTTTTTTTTACAGAATATAGATGCTTTATCACTGTACTTAATATGGTGTCTTGTTCACTATACTTAAAAATGCACCACTCATAAATATTT-AATTCAGCAAGCCACAACCAAGACTTGATTTTATCAA---------------------------------------CAAAAACCCCTAAATATAAACGGC-AAAAAAGATAGA---TATAATTATTCCAGTTTTTTT------AAAACTTAAAAGATATTCCATTGCCGAATTAAGAAGAAGATAAGTGTTATATGGAAAGAAGGGCATTCAAGCACACTAAAGAAACCTGAGGTAAGCATAATCTGTACAAAATTAAACTGTC--------------------------------------------------CTTTTTGGCATTTT-AACAAATTTGCAACGTTCTTTTTTTTCTTTTTCTGTTTTTTTTTTTTTTTAAGACTGCCTAATTCAGTTTATAGCCATTGTCTGACAAGAGTAGCAAAACATTATCAATAAATAGTCC----TTAGTTTGTACATCATTTTGTTAAAAATG-TTTGATGTCATCCATTTTTAGTGCTGCGACTGTAAACGTACAATAG--AGTAAGAAATTAGACAAAGTTTTCATGTCCAGTAACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAACATGTTCATTCCCCTAACATTGCAGTATATACTAGCATTAGCTTTCTTTTTAAAATTTTTTTTCTCTATAAGCATTTTTAAAAGGCATACCCAAAAGAGGTGTTTAATCACCATC-----CCCACCAAAATATAGTTTATTATCTCTCTCCCTCTTTTTTAATGATAGTGTAAACTGAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAACAGGAAGTGGTCACTGAATATTGCTGCTATTACTGCCATTGCTGTCCGTGCCGTTAGTCTCTGAGGTGAGAGCCTTGTTGATGGAGTTAAGGTTGGCGTCAGAGGGCATGGCATCTCTGCGAGGCGGCATCCTCTCATTAATTCGGTCTAAGCCCTTGGCTTCCTCGAAGCTAGTGATCTTATGTTGTGGTGAAAATCCTTTGATAGCTAAACAGAAAATCATTAAAAAAAGAAAACCAGGATTATCCAAAGGAAAACAAAGGGCACAGCTGTTGCAGCAGGTGATGTTAGAGATTTCTCAGTGAGAGGGAATCCTTCAGTG--AAGAACAAAGTGACGGGACCTGCACACCACACAACAGACTCCTTACCATACTCGGAAGTAACCAAAGGTTTGAAAACAGCCAATGTCTCTTGCCAACCAAAATGTCCTCTTGAAGTTATTAAGATGTAAGCATTTCTCCTGTCT------TCATGAAAGTTTAGCTCAAAGAAATCCAAAGTGGACA-------------CATAAAGAGGAAAGCTGCTTTCAGGG-ACA-----AGCCTCTAGAACCAGCATCAACTGGCCACATCATAAGCATCAAACACCTTAACCTAGACAGGCTGCAGCATGTCCCTCTTTGTATTCCTCCATTGTACTAGGTAAT--GGCAAA---TTCAGTGGAATCAGTATGTTTGCTATACCTAAAAACCTAGCAAAGGGCTTAAAGCAGGAGCTAAAAGGAGCTAGAAAAGGAATTAACCGGGGCATTTCCAT------GCCATCTCAGAATCCCAGAAAGAACTTCTTGACAAGCAACTCAATGATGACATGAAAAAAAAAGAAATTATAAACTCCTGTCTCCACTTAACTTTGGAAGCATGTGGAGTGAGTGACAAGGTAAGAGAAACTAAAAAAAAAAATCAAGATAAGGTCA-----CTAGGTAGAAATGTATCGTCT------GCCCTTCAGCAGTGA--------------------------ACAGGTCAAACTGATGTTCATCTG-GTATCCA---------------TTACTGCCTAAATGAAAGAAAAACTCAGTAGATCAATGTAGATGTAAGTGATGGTTAAATAATAACAAGGAA-------AAAAATGCCTTTCACA---------ATATTTAGCAAAAATGCATTGAACTGGTTTTGGTCCTATTCAATTAAAACATG------GAATTCTCAAAGTGGGAATGATATTTG-ATTTTTTTAAAAAGTAATCTTTGGTGTGCTACAGCG-ATAGGTAAGGCATTTGTACAAAAAACTTAATGATTTCTTCAGTGAGTACACCAACTGGTGAGCTGCAAATAAAACACATAAATGGGGAACCAATGACATCAGTTTGCTT--------------------------------------TACTCCCTGTGAAGTGCAAGCCAGATATTTCAG---GGCCAATC----ACCAATGCTCAATTGGGCTGCATCACCATGGCTGATTAAGGAT------------AATTTCATGGTACCTTTATCCTCCCAACCTT---ATTTGGGGGGGAAAAAAAAAAAAAGGAAAGCAGTTTCAAGCTGA-AACTTTACCAGCCACTCCTACACAAATGTGCAGTGCCTTTTATTAGTAT--GGATGAGATTCCTAAAAGATATACACAGTTGTTTCAATACTCATTAAAAGATGAGA---AATAGTTTT---------TCCCCCCTCTGCATTTTAAAG----GTTAGCATAATGGTGATTAGTCAACTGTGAGAGGAATAAGATGCGAAAATGGGGAAAGACCAAGGCCCAAAGCAAAGCTTGTTAATTCTTCTCTA--ATTTAGTAATAAATTGCAAAATAATAGAGCTGTCTAATGAGCACCCA-------CCCTGAAAAC--TAACTCAAT-------TATTTTGAAATACAAAAGAATAGCATG-------------AAGTGGTACTCTACTGTCTTTTTTAGACTACTG-----------------------TGAATATAATTTCATCATAATTAACAGGTATAAAAG-----------TTTGTCATCATTA---TCATTTATGAAATGATTTAATTAATTTAAATGGTAAAAGTGAAATTTCTAGGTTTTAAAAGCCAATAGGGTGGGAGTGTTAAAAATGTAGCTAGAACAATGGATACTTCTGGAATGGGGCTCCATTTCTAATCATTT------------------TTGTCATCC-TGGTATGGAAGAATGTGCTCTGCTGTAGTTGCTGGTCAGACAATGGGTATTAGCAATTTACATTGGTAGTATACTTAACACAACACAGAGTCACAG-AAACCACAGAAAACAGCCAAACTATCAACAAGAATGCACACTGCAGATTAGAATTTGCCAAGAGGAATAGAGAATTCCCACATAAATAGCAGTTTATTCACTGCTATTTAGGAAGCAGTTGTATTTTCTCTTAC-----AGTGCTATTGTT---TCCCCTACCATATCCAAATCATGTACAAATTGGAAGAGTCTAAAGTGGCACTTTTTGTATCACACCAAAGGACCATATGCACATAATTTTG-----------AGAAAA------ACAAAAAAGTT--ACCTTGCAAGAACAAAATACAACTGAAGAATTTTGTTTTAAAGGGGAACTTC--AAATTATTATTTTTGAAATTTCCAAAGGATATGGTATGTATAATAAATATTAAAAAC---TATTTTGATATGCAGTTCTCTTA----TAACTATATATTTAAACAACAGTCAAGTAAAAAGCAAATACTAAAGGTTCGACTCTACTGTCCTTGAGCAGTGCTAGAACACAGCTGGAGATGGACACTTCTTGATGTCCCCTGCAGCTCCTAGTACAGTGCCTGGCACAAAGCAGACACTCAGTACACATTCATCAATTGAGTGCTACTTGATACTCGCTATTCTTGTTATCGGCCACTTCCACAGCCACTAGATGCTTTTGAACTTT-TTATAATATTTTGCTGGTGTTAAT------TCTCATACAAATA-CCAGTAGGTTACAATTTGATTTAAGATTACCA---GAACTGTTCATCTTATATACAGCTGTCTCATGTTGGAATATTTTTTAGAGATACAAATTAATGTTGAACTACAACAAAGCACTATTTAAATGAACATTTTTTTCCTTTG--------------GCTACAAACTT----------------CTGAAGACTAGAATTA--AGATGGCTATTTTTATTCTCT--TCAGTGCTGCCTGAAAGTGATTTGAGGGAGGGACATGGTTCAGCTCAAAGATTATTGTTTTATAAGCTACTGGTCA------------AAACAGCTGCC-----ATAACCCCCACCCCACATCATTCAAAATATATAATCCTTTTGTTTTCTGTGATTATAGTATTCA----------TCATATACA-AAAGTCAAACA------TAGCTTTAAGGGAAAGAAACA----------AACAAACAAACCATAGAAGGACATTTTCCCCTTTAAAGCAAGAACATTTTGGTTAATACTGAGCCACAACTGTTAGCTCAACACCCACACACTCTGTACAAGCTACAGCAAAAAAATGAATACACCCAGCAGAGCCCTTATCTGTTGCAGGTACAACAGAAAGGGGACTGGCCAATTTACCTTCATCAGCCTCAATAGCCTCAACAGTAGCTGAAGAGAAGAAAGGGGGTGCAAAATGAATGAGAAAAATGAGCAGAGGATTTTTTAACTCTAAGAACAAATCAGTGACCATCAAAGGAGCTAAGAGAACTAATGTTCCTGTAAGTGCTAGATTCTGGCACAGACAACA-AAACAGAAATGCTAAAAAAAAAAAAAAA chr4 + 94230402 61989092 61989091 61994189 61989092 61989091 61994189 5098 GAAAGGGAAGAGCGCT-TAAGTTCATGCACATTTTTATTGAGTAGTAATATAAAATGCTTCTC-----TCATTGTTACAAGTGCATGCTTTTGATTGCCAACATTTC-GAAGTCAAATTACAAAGGCAAGGCTGTAGGCTGTAGTGAATTACTTGGGCACTTATACAATTGTTAAAAAATATCAATGGACCGTTTTGTTTAGTTTTTCTTTTTTAGAATGAACCAGTCGAAACCCGTAACTGATATACAAAGGGAAAAAAGTGAAAAAATTACACATTTTGTGGCACATGACAGAACATAACAAAATGACTAAACCATTATGACATTAACAGTTATCATGCATTTAGAATTTCACATGTAACTACAAACTTATTTAAATTTCACAAGGTTTGCTAAACATGCTACCCATCTATATGTGCACTGACAAGCTCATGTTAAAAACTTT-AAGAATACTCTTCCCCTTAGA-TTTTTCAAAGCTTTTTTTCGATTACAAAATTTCAAAGGCATTAAGCATTTTTTTTCAGAGAATATAAAGTACGCCAGTATACATACATTTCCAGTATAAGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCTATACAGCCA--TTTTTTTTCTTAAAAAACATGCATAGGCAGA---------TTTTTACAGAATATAGATGCTTT-TCACTGCACTTAATATGGTGTCTTGTTCACTATACTTAAAAATGCACCACTCATAAATATTTAAATTCAGCAAGCCACAACCAAGACTTGA-TTTACCAAAAAATAAATCCGAAACAAAACCCAGAAAACCCCCCAAACCAAACCCTCCTAATTATAAACAGCAAAAAAAGATCAATGTTATCATAATTCCAGTTTTTTTTTTTAAACAAAGAAAAGGATAAT-TGCTGCCAAATT---AGTAAGATAAGTGTTATATTTAAAGAAGGGCATTGAAGCACACTAAAGAAACCTGAGGTAAGCATAATCTGTACAAAATTAATCCGtctctctctctctcactctctctttctctctctctctctctctTTTTTTTCTTTTTTTGGCATTTTAAACAAATTTCCAACAttctttttttttttctttttttttctatatttttAAAGACTGCCTAATTTATTTCATAGCCATTGTCTGACAAGAGTAGCAAAACATTATCAATAAATAGTCCTTATTTAGTTTGTA---CATTTTGTTAAAAATGCTTTGATGTCGTCCATGTTTAGTGCTGCAACTGTAAACGTACAATAGTTAGTAAGAAATTAAACAAAGTTTTCATGTCCAGTAACATAACAAAAGGCCTTTCAGTAACATATCTAGAAGTTCCCAGTGCAGTAGGAAAACATGTTCATTCCCCTAACTTCGCAATATATACCAGCATTAGCTTTCATTTT-------------TCTACAAGCATTTT--AAAGGCATGTCCAAAGGAGGTGTCTATCCCCCACCCCCCTCCCACCAAATTAAAGTTTACGAT--------CTCTTCAGAGATGATTTTGTAAACCAAATCCAACACCTGGCCCCCAGAGCGAGTAAGCTATTATCAGAGGCAAGAACATCCAACTGCCGATGCGCAGCAA-CCCCATCACGCCCTGCAGCTCACCCCC------------------------CGCCCGGGCAGCGGTCACTGAATATTGCTGCTATTACTGCCGTTGCTGTCAGTGCCATTAGTCTCTGTGGAGATTGCCTTGTTGATGGAGTTAAGGTTGGCATCAGATGGCA---CATCTCTGCGCGGAGGCATTCGCTCATTAATTCGATCTAAGCCTTTGGCCTCTTCGAAGCTAGTGATCTTATGCTGGGGTGAAAATCCTTTGATAGCTAAATAAAGGATTATTAAAAAG-------CAAAATTAGC-------------AACGCAGAACTCTT------GGTGGTTTT-----TCCCCCAATGAACG----CCCTTCTTTGCCAAGAAGGCAACGAGAAGATCTG---ACAACACAACAGAGTCCTTACCGTGTACGCAAAGAGCTGGGGGT----GAACCACCGCCACCTCTGGCAAACCA------CCTCT----GTTTCTCAACAATATCAACTTCCACTACTTTGTTGGTCATTGGGGTTCAGCCTGAAACACTCTGAGGCTGACATGAAACTACAGTCCGTAATGCGGAA--CCACTCTTAGGGCACAGTGGTGGCCCAGTGAGTTGGCATTTGTCGTT-------------------------------ACGGCTTACAGCCTGGAAGACATTGTGGCCCACCATAATACCCTTTTATTAGGCAGAACTCCTATAGGACTTTCAACGTGTGATGCACATTAA-----GGCTAGGGGGTTTGGGCTGACCCTGTAAGCTGCTTGC----TGGTCACTCAGGGCAGTTGCCCGCTTCAGCCTCCCTGGACTTTTAGAAAGCAGCTTGAGTCAAACAG--CAGCGATGCTGTGCAACACAGACTAAGGATATCATC-------------ATTTTG---GCATAT--------TGGTA---CAATTGAAATTTGAAAATACAATCAACAGAGGACCAAAGTTCCAACTGGACCTGAGGACTTTTGAAACACCTTTCAGCAGCAGCATCAATGATGGCCAACATCGACCTTAGAAGGCAGATGCAGGCTTATAAATGTATTCACAGACCGTGCTTTATTTATTTTGTCCGTGATTGAAGAATTTA--AGAT--ATTTAGCTTTAA------AGCAAAAGAGAACAAAGAACTGTAGGCAAACAGCAGGTCATAGCCCCACAGACAATTTGTAAAA--GCCTTCCGTGTGTCTTTCTCTTATCTACACCAAATGAGTGTGCTGTACTTCCA------GAATGCTGCTTGCAGTTTTGTTATGCCTCTAACTTAACATGCCATATAGCAGAAATGGTGTGTTAGTACCAGGAAACTGCAAACTCCCT-GGGGAGAAAAATGGCAGGGGAGTTTCAAA-----------------GATCAAAT----TCAGTGTTCTTTCCCGCTCTTTATCTTCTCCCCTCTCTATCCCAAAGCATCCCTCCTTCAAAATGTAGTCC-------TCGGTCTGGACAAGCTTGAACTTCTGCTAAAAAAGAAAACACCAAAAAAACAAAACCAAAACCCAGATCCCCAAACATCCCTGGTACC---AATCTACCACTCCTTGCATTTAGTGGG---------AGCGAGAAAAGCGTTTTCATGCTGGTATTTTTGCCAACCATTCCTGTAAAAATG---GATACATCCTGTTTGCCTCAGGATTTAGTTCCTTAACCAGTTTCACAAATGTT-------ACATTGGAACTTTGAATTGCATGGTTTTTAACATGTATCATCCTTCAACTTAGGAAAACAGCAACAACATAATGGCGATTAGTCAAGTGAGCAGGGATGGAGCAGTGAAAAC------AGAACAGGCCCTACA---------GTGAGTTTTTTTCCAGTATTTTATCTTCTACCACAAAACGGAAGA--TGTCTAACAAGCACCCAGGCCAATCCCTTAAAGCAACAGTTTAATGGATGGCCGTGTTGAAACTGAAACACTTGGTGTGTTCTGGAGCTGGCAAGTAGCACAGCTCAGTTGGAATTACAGCAATGGAGCACTTGGTGTCGTCAGGCCCTGAATCAAACTGCA----GAGGGACAATTAGAAAAGGACGAAACATTTTCTCCATCATTAGCTTCGTCTGTG-----------TAGACTTATCCATTACAACTGTGGTTACTGTGTCT----AACTAGTGAGGACAGCAAATCAAGAAT-TAACTTGAGGAGTGCATCATCCTGGAATGGGA--TCAAGTTCAATCAATTGCACTTCAAGCAGACTCATTGTCATCTGCAATACTGAAGAAGGTGCTCTGCTGCAGTTGCTGGTCAGACAACGAGTATTAGCAGTTTACATTGAGAGTATACTAAACACAACACATAGTCACAGAAAATCACAGAAAACAGCCAAACTGTCAACGAGAATGCACACTGCAGATTAGAGATCGCCAATAGGAATAGATAATTCCAACATAAATAGCAGCTTACTCACTGCTATTTAGAAAGCAGTTGTATTTTCTCTTACTTATTTGTTCTATAATTTTATTCACTGCTTTACAAAAATCAAAAACAAATTCAACTGGCCAAAAG-GGCAC-------ATCTCACCAACAGACAGCAATCACCAGATTTTGTATATTTATCTAAAAAAATACCCACAGAAAATTTGAGAGGGGCAAGAACAAAATACAACTGAAGAATTTTGTTTTAAAGGGGAATTATGAAAATTCTTCTTCCAAAACTTTATA-----------ATGCTGAATGAATATTGTAGATCCACATCGCAATATGCAATTACTTTGGTATTAACTGCATAGTTAAA-------------------AATTGCTTATGGGTTAAATTAGAGGCCTGTCAATAAAGC---ATCATAG--------------TTTTTGATGC-----------------------------------TAAACACTCA-----------------------------------GCTAT---------------CTCCCGAGGCAGCCAGACACTTTTCATTTGTAGCAAAAAAGAGTGCTAGCGTTAATGGTTGCTCTAATGTAAATATCCAGTGCG--------TAAACTGCCACTACCAGAGGAAACAGACGTCTTGCAGACACATGCCTCGTGTTGTTTTA-CTTAAAGAGAAACAGAAACGTGCTGAACTGTAACAAAAGACC-----AATAATTGTTTTTTACTAGTGAACTaaaagaaaaaacaacaaactgaaggaaaaacaacaaaaggaaaaaaaaaaTTATTAAAAGGCTGTGTGTTTTCCTTGCCCAGAGATTGCTGAGAATGATTAGAGGCAGAGACACGACCCAGCCTTCAGCGTACAGCTTTG-GAGCTATGTGTCACAGAGCATTTACGAGCTGCTGCCGAGTTATGGCCC--------------TCAAGATCCA-AGTCCCCTGATCTCCTACTGCGGCATTACTCAGTGCTTGGTTCAACACACAGGAATTCCAACAGGATCGTAACTTTCAGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAGCATTTTCCCCTTTAAAGCAATTACATTTTGGTTAATACCGAGCCACAATTGTTAGCCCAACACCCACACAATCTGTACAAGCTACAGC---AAAATGAATACACCCAGCAGAGCCCTTATCTGTTGTAGCACCAACAGAAAGGGGACTGGCCAATTTACCTTCATCAGCCTCAATAGCCTCAACAGTAGCTGAAGAGAAGAAAGGGGTAGCAAAACGAATGAGAAAAATGAGCAGAGGA--TTTTAACTCTAAGAACAAGTCAGTGAACAGCAAAGGAGCTAA-AACACTAATGTTACTGTAAGTGCTGGATTTTGGCAAAACAGACACACACAGAAATGCTACATAAAAACAGTAA ...:.:x:...::x..-..................-........................:.:-----.......................-............x..-.........................x................................................x.......--.......x---..x.:x....:.............:.x.......................................x....:.......................x........:.......::.................::............:.........................xx............................x.......:.......:.........:..............-...........:...:.....-..................:................................-----..........................................x.....................................x.........--...............................---------.......................-......:.......................................................-............................-....:...---------------------------------------....xx.:.....x.......:..-.........x:.---...x..x..............------.x..xxx...:....x.-:::....:....---.:x................xx.............x...............................................x.:...--------------------------------------------------:.............-.........x....:...........:..:..:.x....:.x.x.....x..............:.x..:................................................----..........---................-.........:.....x...........:..................--............:........................x..:.............x....x...........:....:...............................x.:...:.......:.............x....-------------....:.........--........::.....:.......:..x:.x...:.-----.........x..x......:x..--------.....:xxx:.....xx.......::.......:x...............:.:.......:.:........................:...::.......-........:....:........xxxxx------------------------:.xx.:..x..:.............................:........x.....:..........x..x..xx..........................:.....x....---..........x..x.....:.x............:........:.....:..:....................:..x........................:.:.::..:........:-------..::....x.-------------.:x...x.:..x..------....:.x..-----.::.:..:...:x.----:.....xx..--.....x:x.::..x::..:...---..x..........x........:.::x..x..:x.:.::::...----:...x:..:x:::....x..x.....------.....----...x:.x.:xx:..xxx.:...:x..:::.------....x:::...:...:::..:x.x..::.:.:x....-------------.:...x.x....--.::..:.:....-...-----:...:xxx..::::....:x:::.x:-------------------------------..:.x:.:....x..xxxxx.x....:x:..x....x:...:xxx.x..--....:.---:::.xx...x.:xxx.:..x..x.::..x.x..-----:..x.:...x..x::..x.:xx..:x...xx...x.x----x::.:.x:.:.....x..x.x:------...x:.:::..x.:::......x.x:.:xx.x...:..:--..::....x::..x..x.x.:.xx..xx...xxx..-------------.:....---....:.--------..::.---:..xx....:.x:....x.x......x.x.:.::..-----.:.:x.:..xx..x:xxx.:.------:..:........:::--------------------------.x.:.x..:.:xx.x.:.:..xx:-....:..---------------...:.x:x.xx:...xx...:..:.:.--....--..x...x.x...------:x:...x:.x.....:...-------x...xx..xxx...:.---------.:.x..x.:....--..x..xx::xx..:..xx..:...::.xx:x...::x.------.x.:.::..------.....x.::...-.x....x.x.x:xx.xxxx:..::::...:.:.xx.-.x.::.::x.::..x....x.::..x:.:xx:.:.:.:.-:.x...x.x.x:::.x..x...:.x....-----------------..x.x...----.....x.x...--------------------------------------.x.::...x::..:..:.:x..-------..:.---..x...x.----..:xx....x..xx:.:xx:..:..xx.x::.x:.x:x.::.:------------.xx.:.x.......---.x:..x...x:.:.---....:.x...---------.:x:..:.....:x.....x....:-.x:...:...:...:....::.x.....---::.:.x.::.:..x.:x.--....xx::.....x..xx.xx.x....:x....-------x....::..xx.x::.---x..:.....---------..x:..:..x:.x.xxx...:----:x:.:........:..........x..x.x::...xx:..xx.:.....:------...x..:.x..:.x.---------..x.:..:..:..:.--....x:.xx.xx.:::.....:::x...--.......::........-------....x...:.--:.::.:...-------::.x......:xx...x:xx.:.::..-------------....:.:..xx:x.x..:xxxx...x.x:.x..-----------------------.....xx..:.x..----:.xx:...:x..x.....-----------..:x:........---..:.:.:..-----------.x:.:...xx::x..x..x..x::..x..:x..:.----.:.:.:.::..xx:.x:x:.:..:...-..:..x..:x.:..x..xx.:..........:--:..xx.::.....x..------------------........:-:::..:x......x...........:.................:.:.........:.........:x........x...........x........-...:...................:.....:......................:x.:.....x.........x......x.............:...:..............:......................-----x..x....x:..---.:.x..:.:x..:xx......x:x.......x:.xx:.:.x....-.....-------...x......x:...x::.xx...xx:......-----------.:....------...:....x..--:xxxx...........................................:.x:--.....x..x..::x:..x...x:.-----------...:xx...:......:x.:.:---:..:x::.......:..x::..:----.....::...x.....-------------------..x.:..x.x..x.::.x.:x:xx.:.:x.x.::.:x..---.x..:..--------------..:......:-----------------------------------:.:.......-----------------------------------.....---------------..:..:x:..x:.:...::.....x.x:.x.-x:.x..x.xxx....:.:......------...x..::.....-.....:x.--------.:.x:.:xx.:.....---...x::xx.:....::.x...xx..:...:.....xxx..-:..xx.....x...:.xxx:..:......::......:x..:-----...:.x::......x.:xx..--------------:.x.......x----------------xx...:.xx.:.....--.:.x....:.x.x.x...::.--:...x.x.xx....:.:.....x....x..:....:.:::....::xx..xx..:x.:...:-:.....:xx....------------:.:.x......-----..::...--------------....:..x:.-.:...::.x:.:.:..::x::x::.x..:...----------:x.:.:...-:..x..x....------..:....x..::.:.:...x.----------.....xx.x.x..x.:..:::....................xx................:.........:.......:.............x.................---...................................:..xxx...........................................................................xx......:.......................--..................:.......x..x............-.:x.........x...........:....:.....x.:xx:...-.x............x.x.....x.:x.. 16M1D18M1I27M5D23M1I15M1D82M2I8M3I242M1D21M1D51M5I90M2D31M9D23M1D62M1I28M1D8M39I24M1I12M3I21M6I17M1D12M3D88M50I14M1I118M4I10M3D16M1I46M2I141M13D14M2D35M5I23M8D100M1D27M24D112M3D119M7D10M13D14M6D9M5D14M4D10M2I22M3D44M4D26M6D5M4D30M6I37M13I12M2D12M1I3M5I26M31D49M2I6M3I33M5D37M4D22M6I39M2D36M13D6M3D6M8D5M3D36M5I21M6I15M26I24M1I7M15I27M2D4M2D12M6D19M7I16M9I13M2D38M6I9M6D12M1I36M1I39M1D29M17D8M4D11M38I22M7D4M3I8M4I43M12I14M3D14M3I10M9D25M1I28M3D18M2I33M7D16M3I9M9I21M4I50M6D15M9D15M2I28M2D17M7I10M2I9M7I27M13I33M23I14M4D18M11I13M3I9M11D35M4D27M1D32M2D16M18I9M1I96M1I134M5I12M3I45M1D5M7D33M11I6M6I11M2I52M2I24M11D22M3I23M4I16M19D39M3D7M14D10M35D10M35D5M15D31M1I24M6I13M1I8M8D16M3I40M1D42M5D21M14I11M16I16M2I21M2I62M1D13M12I11M5I7M14D10M1D32M10I9M1I11M6I21M10I109M3D148M2D42M1D44M1I28M 3451/4565 75.6% 5098/94230402 0.0% 1020/4565 22.3% 39035219 NA +3113 chr4 + 190214555 101029336 101029335 101029395 60 AACAGAAATGCTAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAATGCCACAGAAATTA chr4 + 94230402 65422539 65422538 65422598 65422539 65422538 65422598 60 AACAGAAATGTAAAAAAAAAAAAAAACCACAAAAAAAAAAGGTTGAGGGCACAGAAATCA ..........:x..............xx.x.......:..::xx:.x.x.........:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 35606797 NA +7795 chr4 + 190214555 101032256 101032255 101032371 116 AGCCTGCTTACCGCTTTGCAGGGTTTGCTTCCCTCCAGAAAGTACTCCGCTGGGGAGCATGCCAGTTGGGGTCAAGCCTTTCAGCGTCAGCACACTCTCACTCTCTTCTCTGGAAG chr4 + 94230402 61996719 61996718 61996834 61996719 61996718 61996834 116 AACATGCTTACCGCTTTGCAGTGTTTGTTTTCCTCCAGAAAGCACACCACTGGGCAGCATTCCTGTGGGAGTCAGCCCTTTCAGCGTCAGCACACTTTCACTCTCCTCCCTGCAGG .:.x.................x.....:..:...........:..x..:.....x.....x..x..x..:....:x....................:........:..:...x.:. 116M 96/116 82.8% 116/94230402 0.0% 0/116 0.0% 39035537 NA +3171 chr4 + 190214555 101033193 101033192 101033270 78 AAAAAGTCTTTAAAATACAAAT---TGTATATATACACATATACACAAACATACATATATTTGCGTGTATATATACATACA chr4 + 94230402 22600184 22600183 22600264 22600184 22600183 22600264 81 AGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCA .:...x..xxx..:.:...x..---:::..::.x......::.:.....x...::........:....:.....:...:.. 22M3I56M 54/78 69.2% 81/94230402 0.0% 3/78 3.8% 78433009 NA +3677 chr4 + 190214555 101035139 101035138 101035211 73 TGCTCCTGTAATCCCAGCTACTTGGGAGGCTGAGACATGAGAATTGCTCGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x....:.:...........::........x.x..x...x::..:........:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 25001934 NA +6353 chr4 + 190214555 101040476 101040475 101040570 95 ACCCACCTGAGCACTGAGAACACTCTGGCCATTTTGCCTATTGCTCGGATCTTGTTCCTTATCACCTCTTTCCGGGCTGCAGCTGTTGCACCTGT chr4 + 94230402 62002628 62002627 62002722 62002628 62002627 62002722 95 ACTTACCTTAGCACTGAGAAAACTCTAGCCATTTTTCCTATCGCTCTTATCTTGTTCCTTATAACCTCCTTTCGAGCAGCAGCTGTTGCTCCTAT ..::....x...........x.....:........x.....:....xx..............x.....:..:..:..x...........x...:. 95M 79/95 83.2% 95/94230402 0.0% 0/95 0.0% 39037848 NA +6353 chr4 + 190214555 101040476 101040475 101040570 95 ACCCACCTGAGCACTGAGAACACTCTGGCCATTTTGCCTATTGCTCGGATCTTGTTCCTTATCACCTCTTTCCGGGCTGCAGCTGTTGCACCTGT chr4 + 94230402 62000072 62000071 62000166 62000072 62000071 62000166 95 ACTTACCTTAGCACTGAGAAAACTCTAGCCATTTTTCCTATCGCTCTTATCTTGTTCCTTATAACCTCCTTTCGAGCAGCAGCTGTTGCTCCTAT ..::....x...........x.....:........x.....:....xx..............x.....:..:..:..x...........x...:. 95M 79/95 83.2% 95/94230402 0.0% 0/95 0.0% 39040404 NA +7339 chr4 + 190214555 101061001 101061000 101061179 179 CTTAGAAATTTATTCTTAGATTTAGCAATGAGACTCTAA-GTAATTATCTGGCAAATAGCATTAGCACAAAGGCTCAAGCCTCTTACCATCAAATCCATCTTCTTCTGACCCTAGTTCATCATCTGAGCAGATGTTGAGGACATTTACCAGCATCTCAGTCACTAAAGAGAGAAAGCAAA chr4 + 94230402 62020052 62020051 62020227 62020052 62020051 62020227 176 CCCAGAATATTATCCCAGGGTTAGTAAATAAACCTTTAAAGTAGTTTCAAGGCAAACAATCTCAAT-TAGGGGTAGGATGTTCTTACCATCAAAACCATCTTCTTCTGTCCCTAATTCATCATCCGAGCAGATGTTCAGCACATTCACCAGCATCTCTGTCACTAAAG---GAAAACAAA .::....xx....:.:x:.:..x:xx...:.:x..:...-...:..x:xx......:.::x.:.::-:.::..:xx:.xx:.............x.............x.....:.........:...........x..x.....:...........x..........---....:.... 39M1I26M1D101M3D9M 127/175 72.6% 176/94230402 0.0% 5/175 2.9% 39040949 NA +7470 chr4 + 190214555 101061001 101061000 101061179 179 CTTAGAAATTTATTCTTAGATTTAGCAATGAGACTCTAA-GTAATTATCTGGCAAATAGCATTAGCACAAAGGCTCAAGCCTCTTACCATCAAATCCATCTTCTTCTGACCCTAGTTCATCATCTGAGCAGATGTTGAGGACATTTACCAGCATCTCAGTCACTAAAGAGAGAAAGCAAA chr4 + 94230402 62012055 62012054 62012230 62012055 62012054 62012230 176 CCCAGAATATTATCCCAGGGTTAGTAAATAAACCTTTAAAGTAGTTTCAAGGCAAACAATCTCAAT-TAGGGGCAGGATGTTCTTACCATCAAAACCATCTTCTTCTGTCCCTAATTCATCATCCGAGCAGATGTTCAGCACATTCACCAGCATCTCTGTCACTAAAG---GAAAACAAA .::....xx....:.:x:.:..x:xx...:.:x..:...-...:..x:xx......:.::x.:.::-:.::...xx:.xx:.............x.............x.....:.........:...........x..x.....:...........x..........---....:.... 39M1I26M1D101M3D9M 128/175 73.1% 176/94230402 0.0% 5/175 2.9% 39048946 NA +11111 chr4 + 190214555 101063226 101063225 101063450 225 ACATACCTTTTTCCCCAACAAATGGAAGGGACCAAGTAAAAACATCCATGAAATTTGGAAGCCAGTATGGATGAGGAGAACAGTTGAATTGCCTGATATTCATAACATTGTTCTCATACTTCAATACTGCAGCTAAAAATAACCAAAAGAG------GATGTTAGGAACA---------------CAGAACA-TATTTCTGCTTCTATGTATGG-CTTTAGCTCATCAAGAAAA---TTCAACCATTTGAC chr4 + 94230402 62022887 62022886 62023136 62022887 62022886 62023136 250 ACGTACCTTTCTCACCCACAAACGGCAAGGACCAGGTAAACACATCCATGAAATTTGGAAGCCAGTAAGGATGAGGGGAGCAGTTGAACTGCCTGATATTCATAACGTTGTTCTCATATTTCAATACTGCAGCT-AAAATAAGAGAAAGAGACAAAAGATGTCAGCTACATCAATGACTCACTCTCAGACCAGTAACACTGGTAGTATTCATAGCCTTCAGGGCTGCAAGACCAGCTTTCAACCACTTGAC ..:.......:..x..x.....:..x.:......:.....x..........................x........:..:........:.................:...........:...............-.......xx:......------.....:..xx...---------------....x..-..x:x...x.xx...x:..:.-...:..xx.xx.....xx.---........:..... 134M1D16M6I13M15I7M1I21M1I19M3I14M 185/224 82.6% 250/94230402 0.0% 27/224 12.1% 39040339 NA +11111 chr4 + 190214555 101063226 101063225 101063450 225 ACATACCTTTTTCCCCAACAAATGGAAGGGACCAAGTAAAAACATCCATGAAATTTGGAAGCCAGTATGGATGAGGAGAACAGTTGAATTGCCTGATATTCATAACATTGTTCTCATACTTCAATACTGCAGCTAAAAATAACCAAAAGAG------GATGTTAGGAACA---------------CAGAACA-TATTTCTGCTTCTATGTATGG-CTTTAGCTCATCAAGAAAA---TTCAACCATTTGAC chr4 + 94230402 62014788 62014787 62015037 62014788 62014787 62015037 250 ACGTACCTTTCTCACCCACAAACGGCAAGGACCAGGTAAACACATCCATGAAATTTGGAAGCCAGTAAGGATGAGGGGAGCAGTTGAACTGCCTGATATTCATAACGTTGTTCTCATATTTCAATACTGCAGCT-AAAATAAGAGAAAGAGACAAAAGATGTCAGCTACATCAATGACTCACTCTCAGACCAGTAACACTGGTAGTATTCATAGCCTTCAGGGCTGCAAGACCAGCTTTCAACCACTTGAC ..:.......:..x..x.....:..x.:......:.....x..........................x........:..:........:.................:...........:...............-.......xx:......------.....:..xx...---------------....x..-..x:x...x.xx...x:..:.-...:..xx.xx.....xx.---........:..... 134M1D16M6I13M15I7M1I21M1I19M3I14M 185/224 82.6% 250/94230402 0.0% 27/224 12.1% 39048438 NA +9209 chr4 + 190214555 101080527 101080526 101080640 114 CTTACCTTTGTTATTGTATACATCTAAGTAATTTGGTGCTGAAAAAATTGTAATTAGAGAAGGGAAGCCTGTTGTTTGGCTTTTCCTGTACATGCGGTACCTAAAAAGAACAAA chr4 + 94230402 62031569 62031568 62031682 62031569 62031568 62031682 114 CTTACCTTTGTTATTGTATACATCTAGATAGTTTGGTGCTGAAAAAATTGTGATTAGTGAAGGGAAGCCTGTGGTTTGGCTTTTCCTGTACATGCGGTACCTAAAGGAAAGAAA ..........................::..:....................:.....x..............x................................:::..x... 114M 104/114 91.2% 114/94230402 0.0% 0/114 0.0% 39048958 NA +10536 chr4 + 190214555 101083181 101083180 101083454 274 CTCACCCTGCATCTTGGGCTTCGTGGGCTCGGAGTATAGATAACAAGTTATTGTGCTGTAAGAATTCACATACAGCCGGGTAACTGCCAGAGACAAAAAGAAAAGGGAAGCATCTGTTAGGAAATCATCAGGAGTAGCACATTTATCTCTAACATCCAGATCTATGTGACTGGATCAAAGATAATCAAACATACATCATTCATGAAACAAGCCTCTTGACTCTAAGGCCAAGTTTATCCTTGTGGCAGAAAAAGCATCTACAGCTGTACTTTTT chr4 + 94230402 62033241 62033240 62033479 62033241 62033240 62033479 239 CTTACCCAGCATCCTGAGCTTCATGAGCTCGGAGTATAGATAACAAGTTATTGTGCTGTAGGAATTCGCACACAGCAGGGTAACTGTTGG-------AAGAAAATAATAGCACCTGTTATGATATTACCAGAAGCACCACACTTAGCTCTAGCTTTCA------------------AAAAATCAGCGAATATGCATCATTCATTAAATCAGC--CTTGCTTTCCTGGCACATTTCA--------GCAGAGGCAGCACTCGAAGCAGCACTTTCT ..:....x.....:..:.....:..:..................................:......:..:.....x.........:::.-------.......x::x....:......x..x..:.:...:..:.x....:...x.....:.x.:..------------------...:..x.x.:..:..:..........x...:x...--....x:.::xx...xx.x..:.--------.....::x....::::x...x.:.....:. 90M7D61M18D36M2D22M8D30M 179/239 74.9% 239/94230402 0.0% 35/239 14.6% 39049940 NA +3005 chr4 + 190214555 101085845 101085844 101085906 62 CACACACACACACAGAGAGAGAGAGAGAGAAAGAGCGAGAGAGAGAGAACGGCAGGAAAAGC chr4 + 94230402 74653186 74653185 74653247 74653186 74653185 74653247 62 CATACACACACACAGAAAGAGAGAGAGAAAAACACTTAGGAATAGAGCTTAACAAGGACAGC ..:.............:...........:...x.x:x..::.x....xx:::..:.:.x... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 26432659 NA +3048 chr4 + 190214555 101088547 101088546 101088623 77 TGCTCTCCAGCCTGGGCGACA---GAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAACTTAGTA chr4 + 94230402 88382690 88382689 88382769 88382690 88382689 88382769 80 TGGTCATTAAACTGAGCAGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATA ..x..x::.:x...:..::..---.........xx.x.........::.:..............:x.x.:..:.x:.:.. 21M3I56M 54/77 70.1% 80/94230402 0.0% 3/77 3.9% 12705857 NA +3040 chr4 + 190214555 101091835 101091834 101091912 78 AATAATAATAATAATAATAATAATAATAATGAAGAAGAGGAGGAGGAGGAGGAGGAAGGAGGAGAAGAGGAGGAGTAA chr4 + 94230402 59372604 59372603 59372681 59372604 59372603 59372681 78 AATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAA ........x.:x..x.................:.::.:x....:..::::::.::..x:.x:.:.:.:::.:x..... 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 41719231 NA +3574 chr4 + 190214555 101106367 101106366 101106511 145 AGAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAA chr4 + 94230402 74078589 74078588 74078728 74078589 74078588 74078728 140 AGAGAGGCCAAAACTAAACAAAAATGTTATAAAAGGAA------AAGAAATATATAAGGCAAAGAAGGAAAAAAAGAATGTTAGAATGTTGCAGTTTAAACAGAAAAGAGGAAAGGAAAGGAAAGAAGATCAAGAACACAAAGAAA ......:xx.:..xx...x...:.x:xx.x:....:..------......x.x.x..:.-......:....:......x.xx....x.xx:x.:xxx..:x.:.:..:..:....:....:......:.xx..::.x.x....... 38M6D15M1I86M 91/139 65.5% 140/94230402 0.0% 7/139 5.0% 27027778 NA +3411 chr4 + 190214555 101106374 101106373 101106487 114 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----------AGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:.:...:...x........x......:..:....-------....x.x.:x..::...::x....:x:xx....xxx:...:..----------:.......::x....:.x...:::....:....:.. 35M7I43M10I36M 77/114 67.5% 131/94230402 0.0% 17/114 14.9% 47094781 NA +3106 chr4 + 190214555 101106380 101106379 101106461 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:.x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 59994202 NA +3495 chr4 + 190214555 101106394 101106393 101106527 134 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAAC chr4 + 94230402 54011593 54011592 54011724 54011593 54011592 54011724 132 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGA--AAAAGCAAGAGACGAAGGAAAAAAAAAAAAAC .:.:...:...x........x......:..:....:x.xxxx::..x:x..x......:.:x:...:x:xx:..:xxx...:...xxx.x..x.x:..:.--.....x....:.x:...:....:...:..... 100M2D32M 83/132 62.9% 132/94230402 0.0% 2/132 1.5% 47094801 NA +3117 chr4 + 190214555 101106412 101106411 101106493 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x...x..::......:.:x.x...:..x...:..::.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 59994234 NA +3293 chr4 + 190214555 101106420 101106419 101106495 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:....:..:...:...x..::..x...x:..x.:..:....x::.x.x...x.x:............::...:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 29505394 NA +3203 chr4 + 190214555 101106436 101106435 101106507 72 AGAAAGAAAGAAAGAAAG-AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAA chr4 + 94230402 71601026 71601025 71601098 71601026 71601025 71601098 73 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAA ..:....:..:...:...-.:.:..x...x...x.:..:....x::.x.x...x.x:................ 18M1I54M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% 29505410 NA +10799 chr4 + 190214555 101108946 101108945 101109093 148 AGACTTACTTCAATACTGAAGTACCCTCTGTCAACATAGTCCCCTAAGAAGAGGTAGCGAGTGTTGGCAGGAGATCCCCCGACTTCAAAGAGCTTCATCAAATCAAAGAATTGTCCATGAATGTCCCCACAAACTGAAAGAAACAAAA chr4 + 94230402 62042674 62042673 62042821 62042674 62042673 62042821 148 AAACTTACTTCAATGCTGAAGTACCCTCTGTCCACATAGTCCCCCAGGAAGAGATACCGTGTGTTGGCAGGAGAACCTCCCACTTCAAACAGTTTCATCAAGTCGAAGAATTGGCCATGGATGTCTCCACAAACTGAAAGGAAAAAAA .:............:.................x...........:.:......:..x..x..............x..:..x........x..:........:..:........x.....:.....:..............:..x.... 148M 128/148 86.5% 148/94230402 0.0% 0/148 0.0% 39066272 NA +5354 chr4 + 190214555 101108965 101108964 101109079 115 AGTACCCTCTGTCAACATAGTCCCCTAAGAAGAGGTAGCGAGTGTTGGCAGGAGATCCCCCGACTTCAAAGAGCTTCATCAAATCAAAGAATTGTCCATGAATGTCCCCACAAAC chr4 + 94230402 35778727 35778726 35778841 35778727 35778726 35778841 115 AGTAGCCTCTGTCCACATAGTCTCCCATGAACAGGTAATTTGTGTCTGGAGACTTCCCACCGATTCTGAAGAGTTCCATAAGATCGTGGAATTGGCCATGGACGTCCCCACAGAC ....x........x........:..:.x...x.....::xx....:x.x..:xxx:..x....:.:::.....:.:...x.:...:x:......x.....:.:.........:.. 115M 81/115 70.4% 115/94230402 0.0% 0/115 0.0% 65330238 NA +3347 chr4 + 190214555 101109613 101109612 101109673 61 TTATCCATTGTAAGACACATCATTAGTTTACGTACCACTAAGGCAAAAAAAAAAAAAAAAA chr4 + 94230402 32397704 32397703 32397764 32397704 32397703 32397764 61 TTCTGCATAGCAACATCCACCATCAATTTATGTATCATTAGGGTAAAAAAAAAAAAAAAAA ..x.x...x.:..x.:x..:...:.:....:...:..:..:..:................. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 68711909 NA +3520 chr4 + 190214555 101124628 101124627 101124745 118 AGAAAGAAAAAG--AAAGAAAGAGAGGGAGAGAGAGACAGAA----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........:...--.x...:......:....:...:......----....xx:..:x:::.x.x::..::x..:.....:...:::.:..:..::..x..x.xxxx:...x.x...:...:.:. 12M2I28M4I78M 76/118 64.4% 124/94230402 0.0% 6/118 5.1% 49976249 NA +3348 chr4 + 190214555 101124632 101124631 101124749 118 AGAAAAAGAAAGAAAGAGAGGGAGAGAGAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .....:.::...xx.x....:..........x.....x.:.::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....:::..:..x..------:...x.x...:...:.:. 100M6I18M 73/118 61.9% 124/94230402 0.0% 6/118 5.1% 49976253 NA +3053 chr4 + 190214555 101124654 101124653 101124745 92 AGAGAGAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 41112168 41112167 41112259 41112168 41112167 41112259 92 AGTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..x...xx:...:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x...:.:x..:::..:.x:.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 60012486 NA +3010 chr4 + 190214555 101124678 101124677 101124742 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 72110005 NA +3078 chr4 + 190214555 101124726 101124725 101124803 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 60012548 NA +3396 chr4 + 190214555 101136400 101136399 101136483 84 ACATGGTGGCATGTGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--..::.x......:...........:x........x.xx.x...xx:.........:.:..x:xx:..:..:.. 9M2D73M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 25103204 NA +3093 chr4 + 190214555 101141230 101141229 101141312 83 CGTGGTGGCTCATGCCTGTAATCACAGCTACTTGACACGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:x..:.--....:.:x...........x.x......x.xx.x...x::...........:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 25108033 NA +3325 chr4 + 190214555 101173913 101173912 101173991 79 ATGGTGGTGGGTGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCATTAGGATCACTTGAGCCCAGGCATTCGAGGCTG chr4 + 94230402 76033198 76033197 76033274 76033198 76033197 76033274 77 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .::......x::.--......:........:..::........x.x.xx.:.x.......:.....:x::.:x:..... 13M2D64M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 25140715 NA +16337 chr4 + 190214555 101195905 101195904 101196129 225 TCAGGACTTACCAGTGACTGGCGCATCAATATCCAGCAAATTTTTTTCCTGTCGAAGAATTGATGCACCCTCTGTTATTATTCTCAATGCAACACTCTCTTCCAGCCTTCCCTCCTTCATAAGATGCGCCTTTAAGATATCCACACGAGGTTTTCCATCATTATCAAACACTTCTTTTGCTGTAAGCCGGTGACTTGGAGGAAATGGAACAGCTGAAAGAAGAAA chr4 + 94230402 62098228 62098227 62098452 62098228 62098227 62098452 225 TCTGTACTAACCTGTGACTGGTGCATCTATGTCCAGCAAATTTTTTTCTTGACGAAGAATTGAAGCTCCCTCTGTTATTATTCGCAATGCAACGCTTTCTTCCAGTCTCCCTTCTTTCATAAGGTGTGCCTTTAAGATATCCACACGTGGCTTGCCATCATTATCAAACACTTCCTTAGCTGTGAGCCGGTGACTTGGAGGAAATGGGACAGCTGTATGGAGAAA ..x.x...x...x........:.....x..:.................:..x...........x..x................x.........:..:........:..:..:..:........:..:....................x..:..x....................:..x.....:.......................:.......x.x.:..... 225M 195/225 86.7% 225/94230402 0.0% 0/225 0.0% 39097677 NA +3453 chr4 + 190214555 101207697 101207696 101207768 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 25174491 NA +8156 chr4 + 190214555 101218503 101218502 101218691 189 TGTTACACCCAAGTTTTCCCATAG--CTCTCACCATATGAGGTCAACTTCTGTTTTCACAAACACTAGGAAAGCTGAATAATAATTACTCACAGTTTAAATTCCTTTCCAGAAACAATTCATTTAGAAAAAACAAA-------GGAAAAAAATTATG---TATAATAACGGAAAATAT---AGTTCATCCAACATCCCGATAAG chr4 + 94230402 62106332 62106331 62106535 62106332 62106331 62106535 204 TGTTACACCCAAGTTTTTCCACAGGCCTCCAACTGCATACTGTTGAGCTTTGTTTTTATTAGCTTTTGGAACAGTGAACAATAATTATCCACAGTTTAAATTCCTTTATAGGAACAATTCATTTGGAGAAAACAAAGTCAGAGGGAAAAAAAAAAAGCCCTGTAACAATGGAAAATACCAAACATCTTCCAAGACTCAGATAAG .................:...:..--...:x..:::..:xx..::.x:.:......:.:x.:.x:.x....x:x....:........::..................x:..:............:..:........-------.........xx.x.---.:...:..:........:---.xx..x.....x.::.x...... 24M2I110M7I14M3I18M3I23M 142/189 75.1% 204/94230402 0.0% 15/189 7.9% 39112171 NA +9270 chr4 + 190214555 101253261 101253260 101253436 176 ATATATTATTTTTTAGCATACATTCTTACAAATTAT--ATGTGAGAAGCAGATGGTGAATGTTAACTTGGCACCGTTCCACCATCTGCTCTTTGCATAGCTAGTTAAGTTCAGAAAATTAATCAAAGATTAAAGAAAGACAATGATAATACTGAAACTAAGAGTCACCTTCTTTCTTG chr4 + 94230402 62133768 62133767 62133945 62133768 62133767 62133945 178 ATACATTTTCTTTATACTTATATTCTTACAAATTATGCATGTGAGGAACAGATGATGAGCGGCAATTTGGCAACACTTCACCATCTGCTATTTGCAGATCTAGTCAAATTCAGAGAGTTAATTAAAGATTAAAGACAGAAACCAATACTGTTGAAGCAGAGAGACATCTTCTTTACTG ...:...x.:...xx:.x..:...............--.......:.:......:...::.x:..:......x.::.:...........x......x.x.....:..:......:.:.....:............x...x.x::...x.::....:.x:....x..:.......x:.. 36M2I140M 133/176 75.6% 178/94230402 0.0% 2/176 1.1% 39119493 NA +3171 chr4 + 190214555 101274175 101274174 101274246 72 GTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGTGGGAGAATTACTTGAACCCAGGAGGCGGAGGTTATAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.......:...::........x:xx.x...x:............:..x:xx:..:.:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 25240969 NA +3676 chr4 + 190214555 101275785 101275784 101275882 98 GTCACTTTTACATCTTTTTTGTTTGTTTTGGGGTGGTGTGGTTTTTTTCGCTTTTTGTTTTCTGTGTGTATGTGTGGTTTTTTTTTTGTTTTTTGTTT chr4 + 94230402 9621608 9621607 9621692 9621608 9621607 9621692 85 GTCTCTTTTAGATGTTTTTTGTTTTTGGTGTGGTGGTGTGGATTTTTTTGGCTTTTTTTCT-------------TGGCTTTTTTTTTTCTTCCTATCT ...x......x..x..........x.xx..x..........x......:.x:....x..:.-------------...:.........x:..::.:.:. 61M13D24M 65/85 76.5% 85/94230402 0.0% 13/85 15.3% 91654177 NA +3570 chr4 + 190214555 101275845 101275844 101275917 73 TCTGTGTGTATGTGTGGTTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTTTTTTGAG chr4 + 94230402 43031775 43031774 43031842 43031775 43031774 43031842 68 TCTGTAGAGATGTAAGGTTTCCTTGTGGTTTTTTGTTTGTTTGTTTATT-----TTTTTGGTTTTTTTTGGAG .....:x:x....:x.....::..x.x...................:..-----.....x.........x... 49M5D19M 55/68 80.9% 68/94230402 0.0% 5/68 7.4% 58244070 NA +3370 chr4 + 190214555 101275861 101275860 101275908 48 GTTTTTTTTTTGT---TTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTT chr4 + 94230402 73021699 73021698 73021749 73021699 73021698 73021749 51 GTTTTTCTTCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTGCTT ......:..:...---.....x..........................:.. 13M3I35M 44/48 91.7% 51/94230402 0.0% 3/48 6.2% 28254162 NA +3011 chr4 + 190214555 101275862 101275861 101275923 62 TTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTTTTTTGAGACAGGG chr4 + 94230402 55690035 55690034 55690096 55690035 55690034 55690096 62 TTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCCCCAAGGAAGAG ..:..::..x:......x........:......x..x.x..........:::::..:x..:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 45585827 NA +4324 chr4 + 190214555 101280680 101280679 101280762 83 CATGGTGGCATGCACCTGCAGTTCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCACTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x..:...............::........x.:x.x...x.............:..x:xx:.....:.. 8M2D73M 63/81 77.8% 81/94230402 0.0% 2/81 2.5% 25247483 NA +6780 chr4 + 190214555 101286756 101286755 101286990 235 CAGCTTC---AGCATCCAT----AGCTGGACATGACAGACCATCTCAGGAGAATCTGAAGGCCTATAAAAGAAGCCTGATCCTTTATCAAG-GTCTGAGTAAGTGGGTCAGCTGTCACCTGTGACAGAGTTCAG-CCTCTCACAAGAAAGTACATTAGCTGCAGCAGCCCAGGATCAGTTTTCGACAGCTGGGACTTGAACCTGTAGGATTTTA---AAAGTTGTTAACTTTTTTTGATGAAAAGCA chr4 + 94230402 62151265 62151264 62151495 62151265 62151264 62151495 231 CAGCTCCCAGAGCAGCCATGGGCAGCCGGGCAGGGCAGCC--TCACAGG--------------CACTGAAGCAGTCCAGTGCTCGCTAAGGAGGCTGTGTAAGTAGGTCAGCTGTCACCTCCAACAGGGTTCAGACTTCTCACAGAAGAGCACATTATCAGTGGCATCTCAGGATCAGTTTTCGACAGCTGAGGCTGCAGTCTTTTGGCCTTTACGGAACACCGCTATATTTTCTGGCTAAGAAATA .....:.---....x....----...:..:..x.:...x.--..x....--------------:.:x:...x..:.:::.x..:xx.x.:.-.x...x......:...............x::....:......-.:.......::.:..:......x.x.::...x.:......................:.:..xx.::..x.x..x:....---..x:::.:..xx....:.x.x.:.:..::. 7M3I9M4I17M2D7M14D28M1I42M1I79M3I30M 154/219 70.3% 231/94230402 0.0% 28/219 12.8% 39135491 NA +3128 chr4 + 190214555 101298836 101298835 101298900 65 GTCTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACTCATGCAT chr4 + 94230402 79265512 79265511 79265576 79265512 79265511 79265576 65 GTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACAT ...x..x.............::........xx...:.:.:::.::::....::....x..x:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 22033324 NA +3324 chr4 + 190214555 101320427 101320426 101320522 96 TACACACACATACACAAAACCACTCATATGTATG----------TATGTAT--GTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACATACACAGACA chr4 + 94230402 68837034 68837033 68837141 68837034 68837033 68837141 108 tatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACA ..:...:.......:.xxxx...x..:.:.:.x.----------..x..x:--...x.x.:.....:..........:........x.:...:...:.:...::x... 34M10I7M2I55M 68/96 70.8% 108/94230402 0.0% 12/96 12.5% 32483393 NA +3318 chr4 + 190214555 101324096 101324095 101324211 116 AGACAAAAGAAAGAAAGAAAAGAAAAGAAAGGAAGG-----GAAGGAAGGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 65771195 65771194 65771314 65771195 65771194 65771314 120 AGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGG-AGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAA ....x:.:....:.....:..x......:..:..:.-----:..xx.::....:....::xx:...x:.::.x:..x.xx...-.......:..::.:x...x.....:x:x..:...x.. 36M5I42M1D37M 74/115 64.3% 120/94230402 0.0% 6/115 5.2% 35552901 NA +3400 chr4 + 190214555 101324168 101324167 101324254 87 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAGGGAAGGGAGG------GAGGGAAGGAAACGAA chr4 + 94230402 1500702 1500701 1500794 1500702 1500701 1500794 93 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaa .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:.......::.x:..:..------.....:.:x...x... 71M6I16M 57/87 65.5% 93/94230402 0.0% 6/87 6.9% 99823466 90391089 +3075 chr4 + 190214555 101341190 101341189 101341237 48 TTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTTTAAGAGATATGGTCTT chr4 + 94230402 37569648 37569647 37569695 37569648 37569647 37569695 48 TTTTCTTTTTTTCTTTTTCTTTTTTCCCTGTCTGAGAGATAAGTCCTT .........................:::.x.:.:.......x.x:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 63771542 NA +3817 chr4 + 190214555 101348968 101348967 101349031 64 AAATACACACACACACACA--------CACA---------CACACACACACACACAAAGAAAACAAAAACAAAAAAAAAAG chr4 + 94230402 55927822 55927821 55927902 55927822 55927821 55927902 81 aaacacacacacacacaaaaaaaAAACCACAAAAAAATCTCACACACACACACACAAAAAAAAAAAACACAAAAAAAAAAG ...:.............x.--------....---------..................:....x...x............. 19M8I4M9I41M 59/64 92.2% 81/94230402 0.0% 17/64 26.6% 45421146 NA +3003 chr4 + 190214555 101348983 101348982 101349036 54 CACACACACACACACACACACACAAAGAAAACAAAAACAAAAAAAAAAGTTTAG chr4 + 94230402 70425770 70425769 70425823 70425770 70425769 70425823 54 CACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAATTAGAATGCAG ....::.........:..........:....x:....x.....xx.:.:.x:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 30923213 NA +3102 chr4 + 190214555 101353632 101353631 101353685 54 TGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACTTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::........x.xx.x...x.:.......:::.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 25320421 NA +3035 chr4 + 190214555 101361489 101361488 101361563 75 AAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAGAAAAAGAAGAAAGAGAAATAAA chr4 + 94230402 54037015 54037014 54037089 54037015 54037014 54037089 75 AAAGTCCATTTTCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAA ...x..::.:.:xx::.::.....:.................x:..:.xx:..:.:x.:....x.....:.x... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 47324474 NA +3859 chr4 + 190214555 101361786 101361785 101361864 79 TATGACTTTAGGCAAGTTATTTAATATATAAAAGTCTCAATTTCTTAAACTAAAAAATGTGAATAATATTAACTACCCA chr4 + 94230402 79037115 79037114 79037193 79037115 79037114 79037193 79 TATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTCCA ......:.....x.........x..x...xx:...:......:..:x..x..x........:.x....x.:.:.x:... 79M 59/79 74.7% 79/94230402 0.0% 0/79 0.0% 22324671 NA +3558 chr4 + 190214555 101368209 101368208 101368291 83 CATGGTGGCACACACCTGCAGTTCCAGATACTTGGAAGTCTGAGTTGGGAGAATCACCTGAGCCCAGGAAGTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--..:........x......:...x.....::xx.x...x...:...:.....:.:x..x:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 25335012 NA +3018 chr4 + 190214555 101368390 101368389 101368510 121 GAGGAAGAAGAAAAAGTAAAAGAAAAAGAAAGAAGAGAGGAAGAAAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAACCAAAAAAAATCCGAGATTGTGGGACAACTACAAAAGGTT chr4 + 94230402 51893687 51893686 51893807 51893687 51893686 51893807 121 GGAGCAGAAGAAAAAGTAGGAAAAAAAGCAAGAGCAGAGGATGAAGCGTCACAGCAGGAAGAACTGAAATCAAGTGCTCTATCAGAAAAAAACAGAGAAAGAGTGAAGAATTTAAAGGACT .::.x.............::.:......x....:x......x...:x:xx.x:.x......:.xx...:xx.::x:xxxx.:..:......x.x....xx.x.x..x:.x.x:...:.::. 121M 73/121 60.3% 121/94230402 0.0% 0/121 0.0% 49474703 NA +3189 chr4 + 190214555 101370908 101370907 101370964 57 CTTCCTTCCTTCCTTCCTTCTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72001425 72001424 72001481 72001425 72001424 72001481 57 CTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCT ..x......:.:..x.:::..x.....:.....:...:...........:.::..:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 29369483 NA +3128 chr4 + 190214555 101383948 101383947 101384005 58 GCACCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACGTGAACCCAGGA chr4 + 94230402 76033206 76033205 76033263 76033206 76033205 76033263 58 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....x...x..:...........::........x.xx.x...xx..x.........:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 25350742 NA +3504 chr4 + 190214555 101398470 101398469 101398608 139 ATCTTCATTTATTTATTCACTAATCCATTTTTTTTTTGCTTCTCTGCCATCCCTCATAGGTCAGATCAG--TCCAATTGATCTTTTT------CTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTG chr4 + 94230402 90152548 90152547 90152685 90152548 90152547 90152685 138 ATCTTCATTTCCCTTTTTACTTTCCCTGATTCCTTTTGCCCC---------CCAAGTAGGTTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ..........x::.x..:...xx:..xxx..::......::.---------..xx:.....:xxx:...--..::x.:xx....:..------:.:...:...::.:.....:.x.............x...x.:.:.:........ 42M9D18M2I16M6I54M 87/130 66.9% 138/94230402 0.0% 17/130 13.1% 11245922 NA +5869 chr4 + 190214555 101414193 101414192 101414424 232 TGAAAAAATGCTGAATAATTGTCATTGCCTTAGAAATTAGATTTTG-TAGTGATACTTTCT---------ACTAGCATTGCAGTTGAGATGCTTTGATAAGGGAGCTACAGTAATATTAAAGAATTCTTGACAGCTACTTATAAGATGTTTACATTTGTAAACAATAACATTTTGTAAACAGAACTTGACTTTAGCAAAGCAAATGCCAAGAGGTTATTTTACTCTCTCTTAGACTCCATAA chr4 + 94230402 62208409 62208408 62208628 62208409 62208408 62208628 220 TGAAAGAGAGATGAACAACTGCAATGGCTTTCAAGATAAGATTTTTCTACTGATGCTCTTTCTCCGCTGTACCAAAATTCTTGTGGTGAAG------TCAGTGAATCACAGTAATATGTAAG---TGTTGACAGCTATTTATGTTAGGTC--CTTTTGAA-----------TTTGTAAACAGAATATGACAGAACTAAAATAAGTGCCAAGAGGTTATTTTACACTCTACTGAACTACATGA .....:.:x.x....:..:..:x..x..:..x:.:..x.......x-..x....:..:.:.---------..:.:x...x:x..x.x..x.------.x..x..:::..........xx...---.x..........:....:xx.x..:--.x....x.-----------.............:x....xxx.x:...::..:...................x....x:.::...x...:. 46M1I14M9I21M6D25M3D25M2D8M11D71M 149/210 71.0% 220/94230402 0.0% 32/210 15.2% 39205784 NA +6156 chr4 + 190214555 101414193 101414192 101414483 291 TGAAAAAATGCTGAATAATTGTCATTGCCTTAGAAATTAGATTTTG-TAGTGATACTTTCT---------ACTAGCATTGCAGTTGAGATGCTTTGATAAGGGAGCTACAGTAATATTAAAGAATTCTTGACAGCTACTTATAAGATGTTTACATTTGTAAACAATAACATTTTGTAAACAGAACTTGACTTTAGCAAAGCAAATGCCAAGAGGTTATTTTACTCTCTCTTAGACTCCATAATGCAGTCCTGATATATTTTGGGGCATT------AAGGTGGGTGGGAAGATTTTAATTATGATAGA chr4 + 94230402 62211293 62211292 62211577 62211293 62211292 62211577 285 TGAAAGAGAGATGAACAACTGCAATGGCTTTCAAGACAAGATTTTTCTACTGATGCTCTTTCTCCGCTGTACCAAAATTCTTGTGGTGAAG------TCAGTGAATCACAGTAATATGTAAG---TGTTGACAGCTATTTATGTTAGGTC--CTTTTGAA-----------TTTGTAAACAGAATATGACAGAACTAAAGTAAGTGCCAAGAGGTTATTTTACACTCTACTGAACTACATGAAGTGATATAAAGATATTTCAGAAAAGTTTTACAGAGCTGGGAGAAAACACTGTACCTGGGACAAA .....:.:x.x....:..:..:x..x..:..x:.:.:x.......x-..x....:..:.:.---------..:.:x...x:x..x.x..x.------.x..x..:::..........xx...---.x..........:....:xx.x..:--.x....x.-----------.............:x....xxx.x:....:..:...................x....x:.::...x...:.x.:::.x:x:.x......::.::x.x.------:..x....x.::..x.:.x..x:.:x..:.:. 46M1I14M9I21M6D25M3D25M2D8M11D98M6I32M 179/269 66.5% 285/94230402 0.0% 38/269 14.1% 39202900 NA +3479 chr4 + 190214555 101426734 101426733 101426792 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCACTTGAACCTGGAGG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x:..x..........::..:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 25393528 NA +3010 chr4 + 190214555 101433701 101433700 101433789 89 AAATGTCAAAATGAGTTTTTCTCATAAGACTAGAATGTCAAACATAAAATGTAAAAATAAAATTCTCATTGGACTGGTATATGTTCAGT chr4 + 94230402 62216689 62216688 62216761 62216689 62216688 62216761 73 AAATGTCAAAAGGACTTTTCATTGTCAGCCCAAAAGGTCAAACATAAGTTCTGAAAATAA----------------GCATATTTTCAGT ...........x..x....:x.::.x..x.:.:..x...........:x.x.:.......----------------.:....x...... 60M16D13M 56/73 76.7% 73/94230402 0.0% 16/73 21.9% 39217012 NA +3022 chr4 + 190214555 101434147 101434146 101434228 82 TTTCCTTCCTCCCTTCCTACTTTCCTTCCTTCCTTCCTTCCCTTTTTTCTTTCTTTCTCCCTTCTTTTCACTTCCCTTTCCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...:...:::::x.:...::::......:::.:..xx:.x.:x...........:........x:.....:.xx.:x..:.. 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 44062119 NA +3008 chr4 + 190214555 101443153 101443152 101443202 50 ATTTAAAGGTGTCACTTTTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 90203133 90203132 90203182 90203133 90203132 90203182 50 ATTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTG ...x.:....x.:x:..x...............xx............... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 11240020 NA +3205 chr4 + 190214555 101452750 101452749 101452810 61 GTGCACCTGTAATCCCAGCTACTTGGGAGGTTGAGATAGGAGAATTGCTTGAACCCTGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:...........::...:....x:xx.x...x::.........x.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 25419546 NA +3646 chr4 + 190214555 101470277 101470276 101470390 114 TGTGTATATATGTGTGTGTCTCTGTGTGTATATACACACAGACACACACATATGTGTATATATAGACACATATATATACACATATATACATATGTGTATATATAGACACATATA chr4 + 94230402 21109190 21109189 21109301 21109190 21109189 21109301 112 TGCTTATACATGTGTG--TCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:x....:.......--........x.::...x:.:.::x..x....:...:x:..:..:x..x..::..:..:x:.::.x.x.:.::..........:x...x:..:::.:. 16M2D96M 70/112 62.5% 112/94230402 0.0% 2/112 1.8% 80361087 NA +3182 chr4 + 190214555 101470304 101470303 101470392 89 GTATATACACACAGACACACACATATGTGTATATATAGACACATATATATACACATATATACATATGTGTATATATAGACACATATATA chr4 + 94230402 22600180 22600179 22600268 22600180 22600179 22600268 89 GCACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.x.x.:x...:x.x.....:..:.x:.:..::.:......::...:.x.x....:..:..x.....:.:....x:..:::.::.. 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% 78870124 NA +3103 chr4 + 190214555 101470383 101470382 101470470 88 CACATATATACACATATATACATATGTGTATATATAGACACATATATACACATATATACATATGTGTATATATAGACACATATATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x..x:x.x.:...:..:.x:.:..::.:......::.....x.x....::....x...:.:.:..x.::...::.::.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 78870202 NA +3338 chr4 + 190214555 101470513 101470512 101470621 109 CATATATACATATGTGTATACATAGACACATATATATACACATATATACATATGTGTATACATATATACATATATACACAC-------ATATACATATGTGTATACATATATACAT chr4 + 94230402 76376857 76376856 76376972 76376857 76376856 76376972 116 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ...::....x.x.x.::...:::.:.x.:.:..:...:..:.:.x.xx:.:x.............:.:......x...x.:-------..:.:.x.x.x...:.:.x.:.x..... 81M7I28M 70/109 64.2% 116/94230402 0.0% 7/109 6.4% 25093656 NA +3108 chr4 + 190214555 101470546 101470545 101470632 87 ATATACACATATATACATATGTGTATACATATATACATATATACACACATATACATATGTGTATACATATATACATATATATATACA chr4 + 94230402 76376858 76376857 76376938 76376858 76376857 76376938 81 ATGCATACTTCTTTACATATG------CAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ..::.:..x.x.x........------..x.x......:...:..:...x.xx:.:x.............:.:......x.:.x.:. 21M6D60M 58/81 71.6% 81/94230402 0.0% 6/81 7.4% 25093688 NA +3101 chr4 + 190214555 101470553 101470552 101470614 62 CATATATACATATGTGTATACATATATACATATATACACACATATACATATGTGTATACATA chr4 + 94230402 63788528 63788527 63788589 63788528 63788527 63788589 62 CATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATA .........x..x:xx..xx....:...:...:...x...x......x.:........:... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 37682025 NA +3370 chr4 + 190214555 101470570 101470569 101470683 114 ATACATATATACATATATACACACATATACATATGTGTATACATATATACATATATATATACATATGTGTATACATATATACAT-ATATATACATATGTGTATACATATATACAT chr4 + 94230402 76376858 76376857 76376972 76376858 76376857 76376972 115 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ..:....:x.x:x..:...::..x.x......:.:..:.....x.xx...x.:.:....:.:..:..::....x.:.x...x.x-.x..:.:.x.x.x...:.:.x.:.x..... 84M1I30M 73/114 64.0% 115/94230402 0.0% 1/114 0.9% 25093712 NA +3537 chr4 + 190214555 101470605 101470604 101470723 119 TGTATACATATATACATAT--ATATATACATATGTGTATACATATATACATATATATACATATGTGTATACATATATACATATATATACACATATATACATATGTGTATACATATATACAT chr4 + 94230402 76376859 76376858 76376972 76376859 76376858 76376972 114 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTG----CATATAAACAGATAGAGAAA---ATGTGCCTCTCTGTGTGCTTGTTTACAT ..:....x.x.x.......--.x.x......:.:..:.....x.xx...x.:.:............----......x...x...x.x.x.---..:.:.x.x.x...:.:.x.:.x..... 19M2I45M4D20M3D28M 82/112 73.2% 114/94230402 0.0% 9/112 8.0% 25093746 NA +3009 chr4 + 190214555 101470621 101470620 101470679 59 TATATATATACATATGTGTATACATATATACATATATATACATATGTGTATACATATAT chr4 + 94230402 76709592 76709591 76709650 76709592 76709591 76709650 59 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATAT .........:...:...x......x::..x..:..:...:::...x...:.x:...... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 24761029 NA +3066 chr4 + 190214555 101470651 101470650 101470734 84 CATATATATACATATGTGTATACATATATACATATATATACACATATATACATATGTGTATACATATATACATATATACATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTT--GTGTATACATATGTGCATATAAACAGATA ...::...:x:x.x.:::...:..x.x......:...::.:...x.xx...x.--............:.:......x...x... 53M2D29M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 25093794 NA +3321 chr4 + 190214555 101489170 101489169 101489205 36 TTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT chr4 + 94230402 72938554 72938553 72938589 72938554 72938553 72938589 36 TTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 28550616 NA +3776 chr4 + 190214555 101500266 101500265 101500344 79 GTGGCACACGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATTGCTTGAACCCAGAAGCCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--....:.:...........::.:......x.xx.x...x::...............:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 25467065 NA +3653 chr4 + 190214555 101504445 101504444 101504518 74 GTGTGCCTGTAGCCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.....::.:.........::........x.xx.x...x.:..............x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 25471241 NA +3143 chr4 + 190214555 101530310 101530309 101530365 56 AAGTATAATTAAAAAAAAAAACATAAAAAAAAAAAAAAAAGAGTGTTTGGTTTTCC chr4 + 94230402 11487990 11487989 11488045 11487990 11487989 11488045 56 AAATAAAATAAATAAAGGAAACTTAAAAAAAAAAAAAAAAGCATGTCAAGTTTTCC ..:..x...x..x...::....x..................x:...:x:....... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 90042320 NA +3071 chr4 + 190214555 101536215 101536214 101536269 55 CCATCTCAAAAAACAAAAACAAAAACAAAAACAAAACAAAACAACAAAAAAAAAC chr4 + 94230402 12785733 12785732 12785787 12785733 12785732 12785787 55 CCCTTGCAAAAAACAACAACAACAAAAAGAAACAAACAAAATAACAACAAAAAAC ..x.:x..........x.....x..x..:..xx........:.....x....... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 88750482 NA +5957 chr4 + 190214555 101547667 101547666 101547896 230 AGATGAAAATATATTTAGTATTAATGACAATTAGGCATACCTGTATATATTTGGCTCTACAGAAATTATATTCATAACAAATCACAGGGTGACATTGTTTTATGTTCTGCAGAATTTTGATTCCTTATCATCATTCACAATTATTTTCAGA---ATTGCCTAAGGGAAAATTGTTACCTTGGGAGCACAAA-GAATATACACTTTTATTCTAGACCAGAAAAGC--TGAAATTCTT chr4 + 94230402 62238368 62238367 62238597 62238368 62238367 62238597 230 AGACAGAAGTAAATTTGGTGTCACAGA-GATTATACTTAGTTTTGCAAAACTGGCATTA----ATTCATTCTTACAACTAATCACAGGGTGACATAGTTTTGTTTTCTGATGATGCTTGATCTCTTATTAACATGTACAGTAACTTTACGAGTTGTTGCCTGAAGCTAAA-TGTTACCTTGGTAACAAAAGTTGAAATACAGATGCCCTCTAGGCCAGAAAAATAATAAAACCCTT ...:::..:..x....:..:.:.xx..-:....x:.x..x:.x.::.x.x:....x:..----.x.:..x:.:.:...x................x.....:.x.....xx..xx:.....::.....:.x...x:...:.x.:...xx..---:......:.:.xx...-...........x.:..x..:-x:.x.....xx.x:x:.....:........::--.:...::... 27M1D31M4D88M3I16M1D20M1I32M2I10M 150/224 67.0% 230/94230402 0.0% 12/224 5.4% 39309299 NA +4069 chr4 + 190214555 101596260 101596259 101596397 138 ATATAATATATTATTTATATA------TATTATATATATT-----ATTTATATATATT--ATTTATATATTATTTATATATAATATATATTATATATAATATATATTATATATAATATATATATTATATATAT-ATATTATATATATAATAT chr4 + 94230402 26320183 26320182 26320331 26320183 26320182 26320331 149 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTA---TATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTAT ..:..:.:.:.:...x...x.------.x......:....-----:..x....x..x.--::...x..x.xx:.:.:..:..---....:..:....x.......:......:.......x......:...x.-...x.....x.x..:... 21M6I13M5I13M2I22M3D48M1I18M 100/135 74.1% 149/94230402 0.0% 17/135 12.6% 75276077 NA +3265 chr4 + 190214555 101602857 101602856 101602929 73 TGCCCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTGGAACCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:.........::::........x.xx.x...x.:..x.....:..:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 25569652 NA +3352 chr4 + 190214555 101614206 101614205 101614289 84 ACATGTTGGCGAATGCCTGTAATGCCAGCTACTCAAGAGGCTGAGGCATGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::x...:.x.:.--....:.x.........::.:........x.x..x...x..........::.:..x:xx:..:..:.. 15M2D67M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 25581010 NA +3007 chr4 + 190214555 101615929 101615928 101615966 38 GGGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 81099535 81099534 81099572 81099535 81099534 81099572 38 GGGGGTTTTTTGTTTGTTTTTCTGTTTTGTTTTGTTTT ....x..............x.:................ 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 20516394 NA +3195 chr4 + 190214555 101615933 101615932 101615969 37 TTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTCCC chr4 + 94230402 55690049 55690048 55690085 55690049 55690048 55690085 37 TTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCC ............:.....................:.. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 45925884 NA +3169 chr4 + 190214555 101657015 101657014 101657085 71 ACGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::......--...x......:...........::........x.xx.x...xx:.x......::.:.. 11M2D58M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% 25623819 NA +3158 chr4 + 190214555 101664786 101664785 101664854 69 AAAAGGAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAGAAAAGGAAGAGAGACATAAAAAAATAGAAA chr4 + 94230402 84199590 84199589 84199658 84199590 84199589 84199658 69 AAAAGTCAAGACAAAGTAAAAAGAAAAAAGAAAAAAAAGAAAAGTGGGGAATACATATAATCACATAAA .....xx..:.x...:x..........:.:..............x::.::.x.....x..xx.:.x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 17465196 NA +3099 chr4 + 190214555 101679462 101679461 101679533 72 TTTTTTAATACCCATAAGTTTTTTGTTATTACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAATT chr4 + 94230402 80507627 80507626 80507698 80507627 80507626 80507698 72 TTATTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTTCCCCCAAACTGAATT ..x......x:.:.:xxx:.:....:....x.....:.........x.:........::::x.:..x..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 21171835 NA +3009 chr4 + 190214555 101710350 101710349 101710396 47 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x..........x..........:x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 94852740 NA +6692 chr4 + 190214555 101711709 101711708 101711985 277 AAGATCAGCAAATATATAAAACAAAATAATTTGATTTACAGTAATAGCAGATGGTGGCCACCTGCCGT------TTGTGTTAAATATGAGTCATGTTCAGCAATGCCATCATTTATGAAACTAGAGATAGTCCCTATTTTCTATTTCTAATTTGCAGAATAGGCATAAATGAATAAAG-ACATGACAGGTTTGGTGATTAAAAGAGTGGCAGAGTTTTAAATTCACTACATTAGTGAGTTCATTATGAGTTGC--TTCATTGCAGCTTAGTAATGCAGGGACAGTT chr4 + 94230402 62265764 62265763 62266029 62265764 62265763 62266029 266 AACAACAAGAGGTATGCAAGATGAAACGATGTGATTTACAGTAATAACAGACTGGAGCTACCTGCTACAAATCATTATGCCAAA--------------AAAAAAAACATCAGTTATGCAACTTGATATGAAACCCATTTTC-----CTTATCTATAAAGCAGACATAAATGACCAAAACATATGATGAGTTTGTTAATTAAGGTAGTGGCTGAATTCCAGTAGGACCACTTTATAAAGTTTATTAT-AATAGCAGTTCTTTTTGGCCTAACAATGAATGGTAAATT ..x.x..:x.::...::..:.::...::..x...............:....:x.x:..:......:::------..:..::...--------------.:x..x:x.....x.....x....x..x..::xx..:......-----..x..:.::.:.::..:.........x:...:-.:....:::.....x.:.....::x......x..:..::.:xxxx..:..x...xx:....:.....-.:.x..--...x..x::..:..::....x.x..xx.:.. 68M6I10M14D43M5D32M1I67M1D6M2I31M 168/257 65.4% 266/94230402 0.0% 29/257 11.3% 39445945 NA +6597 chr4 + 190214555 101711709 101711708 101711985 277 AAGATCAGCAAATATATAAAACAAAATAATTTGATTTACAGTAATAGCAGATGGTGGCCACCTGCCGTTTGTGTTAAATATGAGTCATGTT--CAGCAATGCCATCATTTATGAAACTAGAGATAGTCCCTATTTTCTATTTCTAATTTGCAGAATAGGCATAAATGAATAAAGACATGACAGGTTTGGTGATTAAAAGAGTGGCAGAGTTTTAAATTCACTACATTAGTGAGTTCATTATGAGTTGC--TTCATTGCAGCTTAGTAATGCAGGGACAGTT chr4 + 94230402 62293331 62293330 62293588 62293331 62293330 62293588 258 AACAACAAGAGGTATGCAAGATGAAATGATGTGATTTACAGTAATAACAGACTGGAGCTACCTGC-------------TACAAATCATTATGCAAAAAAAAACATCAGTTATGCAACTTGATATGAAACCCATTTTC-----CTTATCTATAAAGCAGACATAAATGACCAAA-ATATGA---GTTTGTTAATTAAGGTAGTAGCAGAATTCCAGTAGGACCACTTTATAAAGTTTATTAT-AATAGCAGTTCTTTTTGGCCTAACAATGAATGGTTAATT ..x.x..:x.::...::..:.::....:..x...............:....:x.x:..:......-------------..::.:....xx.--x.:x..x:x.....x.....x....x..x..::xx..:......-----..x..:.::.:.::..:.........x:...-.:....---.....x.:.....::x...:.....:..::.:xxxx..:..x...xx:....:.....-.:.x..--...x..x::..:..::....x.x..x:.:.. 65M13D13M2I44M5D31M1D6M3D58M1D6M2I31M 170/254 66.9% 258/94230402 0.0% 27/254 10.6% 39418378 NA +3116 chr4 + 190214555 101715513 101715512 101715577 65 ATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAATTTTTAGCAAACCCAAAGAAAGA chr4 + 94230402 21376110 21376109 21376174 21376110 21376109 21376174 65 ATCACACAACCAAAAAAAAAGACAAAAAGAAAGAAATAAAATTTATTAGAAAACACACTGAAAAA ...x..x..xx.........:.x.............x..:.x..x....x....x..xx....:. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 80339403 NA +3227 chr4 + 190214555 101728393 101728392 101728462 70 CATGGTGGCAGGCGCCTGTAATCCTAGCTACCTGGGAGGCTGAGACAGGAGAAACGCTTGAACTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--..:.x....:.:.:......:..::........x.xx.x...:.:.......:...:.. 9M2D59M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 25695196 NA +3217 chr4 + 190214555 101735336 101735335 101735390 55 CAGAAATTGTACTTGTAGATTTTTTGTTTGTTTGTTTGTTTTCTTTTCTTTTAGA chr4 + 94230402 45081582 45081581 45081636 45081582 45081581 45081636 55 CAGGAAAATTACTGATAGGCTTTTTGTTTGTTTGTTTGTTTTGTTTTATTTTGGA ...:..xxx....x:...::......................x....x....:.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 56653754 NA +3058 chr4 + 190214555 101748683 101748682 101748762 80 AGGTGTCTGTGTATATATATATACACAAATATATACATATATACACATATATACATATATACACATATAT---ACATATATAC chr4 + 94230402 54738088 54738087 54738170 54738088 54738087 54738170 83 AAGCGCCCGTGGATGTGTACATACATACATAAATGCATGGATACACAGATAGAGATATATAAGCAATTATCCCACAGAGATAC .:.:.:.:...x..:.:..:.....:.x...x..:...:x.......x...x.x.......x:..xx...---...x.x.... 70M3I10M 57/80 71.2% 83/94230402 0.0% 3/80 3.8% 47010595 NA +3640 chr4 + 190214555 101775262 101775261 101775419 158 AGATTTTTTGAGACCTGGGATTTTTCTTGTC------CAATTTTGGGTTTCAGTTTATGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTATGCATATATATAT----------ATATGCATATATATAAATATAATATATATATATTTATATATATACTATATATATAAATTC chr4 + 94230402 85834485 85834484 85834649 85834485 85834484 85834649 165 AGCTTTATTAATACCT---ACCTTATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGA-ATTT-----TCTTCTGTATGTACAAATTC ..x...x..:.x....---.::..x:...:.------:.:...x..x...:x:..:..x.....x....::...........:.xx:....x.....:....:.----------x......:.:...:.x.:..:::x.:x:x.-....-----.x.x..:...:..:...... 16M3D12M6I67M10I30M1D4M5D20M 102/149 68.5% 165/94230402 0.0% 25/149 16.8% 15940777 NA +3070 chr4 + 190214555 101775282 101775281 101775362 81 TTTTTCTTGTCCAATTTT----GGGTTTCAGTTTATGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTATGCATATATATATATA chr4 + 94230402 15015641 15015640 15015725 15015641 15015640 15015725 85 TTCTTTTCTTCTGATTTTCTTAGTTATTAAATTTAAGCATGTATGTATATGTGTGGGTGTGTATGCATATGCATAGAAACCTATA ..:..:.:x..::.....----.xxx..x.:....x.::...:...::.......x......:..::........x.x.:x.... 18M4I63M 56/81 69.1% 85/94230402 0.0% 4/81 4.9% 86759641 NA +3057 chr4 + 190214555 101775341 101775340 101775395 55 TGTGTATGCATATATATATATATGCATATATATAAATATAATATATATATATTTA chr4 + 94230402 43939132 43939131 43939186 43939132 43939131 43939186 55 TGTATATATACATATGTATATATGCACATATGGAAATACAAAGTGTGTTTATTTA ...:...::.:....:..........:....:x.....:..x:.:.:.x...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 57836209 NA +3148 chr4 + 190214555 101807949 101807948 101808027 79 GTGGCGCACACCTGTAGTCCCAGCTACTCGGGAGAGTGAGGCAGGAGAATCGCTTGAACCCGGGATGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......:.........:.::..:x....x.xx.x...x.:.........:.:.xx.xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 25774748 NA +3005 chr4 + 190214555 101821640 101821639 101821692 53 TGGTTTGGGTTTTTTTGTTTGTTTGTTTGTTTGCTTGATTTTTTGAATCGAGG chr4 + 94230402 65750601 65750600 65750653 65750601 65750600 65750653 53 TGATTTAAGGTTTTTTGTTTTGTTTTTTGTTTGCTTGGTTTTTTAAATTCAAG ..:...::.x..........xx..x............:......:...:x.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 36071039 NA +15791 chr4 + 190214555 101829779 101829778 101830183 405 ATATAAGAAAATATTT-TTTCTTTTTCCAGGAAATACAAAAGATATAATAATGATATATGAAGAAGATGCTGAGGAATGGGCTCTGTACTTGACAGAAGTATTTTTACATGTTGTGAAAAGGGAAGCCATCCTGTTATATCGCTTGGAGAATTTCTCTTTTCGGCATTTGGAGTTGCTGAACTTAACGTCTTACAAATGTAAACTTTTGATATTATCAAATAGCCTGCTTAGAGACCTAACTCCAAAGAAATGTCAGTTTCTGGAAAAGATACTTCATTCACCAAAAAGTGTAGTTACTTTGCTTTGTGGAGTGAAGAGTTCAGATCAGCTCTATGAATTACTAAATATCTCTCAAAGCAGATGGGAGATCTCAACTGAACAGGAACCTGAAGACTACATCTCTGT chr4 + 94230402 62339058 62339057 62339463 62339058 62339057 62339463 406 ATTTAAAATGATTTTTGCTTTCTTTTCTAGAGCATACAAAGGATATACTTGTGATATATGAACAAGAAGCAGAAGAGTGGGCTCTGTATTTAAAATCTCTTTTTGGACACACAGTGAATGAAGAAGGAATCTTACTCTACAATCTGGAGACTTTGTCTTTCAAGCGTCTGGAGTTATTCTCTTTATCATGTTATAAATGTAAACTCCTGATACTATCATATGGACTCCTTAAATGCCTGAACCGAAAGCGATGCTGTTTTCTGGCACATGTTCTTCAACCTCCAGATAATGTGGTGATCCTGCTTTGTGGTGTGGAGAATTCAGACATGCTTTATGAAATACTAACCTTAAGTGGAAGGAGCAGAGAGATCTTCACTGATCAGGAACCTGAGGACTACCTCTCCAT ..x...:.x:..x...-:..::.....:..::x.......:......x.x:...........x....x..x..:..:...........:..:.x.xxxx.x...xx...:::x.....x:::....xx...:.::.x..:x:::......x...x.....:x:..:.:.......::.xxx:...x.:.x...:...........::.....:.....x..:.x..x....:.x:...:.x:.x....x:...:::x.......x.x.x:.x.....x:.x...:.x.:...:..x.:::..........x...:...:......:xx...:......x......x:x.xxx.x:...x..xx.:.......:x.....x...........:......x....::. 16M1I389M 275/405 67.9% 406/94230402 0.0% 1/405 0.2% 39490721 NA +3027 chr4 + 190214555 101832871 101832870 101832928 58 CTTTGCTTTCTTTTTCCCTCCCTTCCTCCCTTCCTTCCCTCCCTCTCTCCTTCCCTTT chr4 + 94230402 47133590 47133589 47133647 47133590 47133589 47133647 58 CTTTGCTTTTTTTCTCTCTCCCTCCCTTCCTTCCTTTCCACAGACTTCCATGCACTTT .........:...:..:......:...:........:..x.xxx..::.x.x.x.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 54699281 NA +3160 chr4 + 190214555 101839931 101839930 101839986 56 TATTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507628 80507627 80507683 80507628 80507627 80507683 56 TATTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT ..........:.x:..::.:...x:.x..::..............x.:........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 21332303 NA +3031 chr4 + 190214555 101849508 101849507 101849557 50 CACACACACATATACACACACACACAAATATATAAGCATATATATGTATA chr4 + 94230402 74526077 74526076 74526126 74526077 74526076 74526126 50 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..........:.:.::x...:.............x.:......:.:.x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 27323431 NA +3297 chr4 + 190214555 101850223 101850222 101850281 59 TGCTTTGAATTTGTGTTTGGGTGTCTTTTTGTTTGTTTGTTTGTTTGGTTGGTTGGTTT chr4 + 94230402 46113597 46113596 46113655 46113597 46113596 46113655 59 TGTTTTCTATTTGTGTGCATGCGTGGTTCTGTTTTTCTGTTTGTTTGGTTGGTTGGTTT ..:...xx........x::x.:..xx..:.....x.:...................... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 55736626 NA +3197 chr4 + 190214555 101850249 101850248 101850289 41 TTTTGTTTGTTTGTTTGTTTGGTTGGTTGGTTTGTTTTTTT chr4 + 94230402 31166933 31166932 31166973 31166933 31166932 31166973 41 TTTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTT ....x...x.......................x........ 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 70683316 NA +3036 chr4 + 190214555 101852464 101852463 101852524 61 TTTCGGCTATATATATATATATATATATATATATATATATACACACACACATATAGTCTAT chr4 + 94230402 41650574 41650573 41650634 41650574 41650573 41650634 61 TTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTATCTTAT ...::..:x..:..x.xxx..x.:...........................::..x::... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 60201890 NA +14367 chr4 + 190214555 101862463 101862462 101862889 427 TGGGTTCTTTGGTTAATGTAAACTTTTCCAAATGCTTAAATGGGTTACATTTTCATCTTACAGAATCCTGGTGAAATATTCATAATTTTGAGAGATGAAGTAATTGGTGATACTGTAGAGGTTGAATTTACATCAAGTAATAAGCGCATTAGAACACGGCCAGCCCTTTGGAATAAGAAAGTCTGGTGCATGAAAGCTTTAGGTAAG---AATGTTTATGATTT--AATAAGCATAAAACATTATCCTGAGTTCCTTCCAATAAATTTATAATAAATGGTTTCACTTCCTTACAAAAACTAATATTGTTCTGCAGGTGTTTCCTGTGTTTAGTTTTCACATACCCAAGGTTGTTATTATTAATCTGGATTTGCAAAAGTAAGAACATGTAAATTATGAGAAATTAGT----------TTGTATACTGTGTAATGAAATGACA chr4 + 94230402 62362134 62362133 62362544 62362134 62362133 62362544 411 TGCGTTTTACAATTTCAGTACAATTTTGTGAAGGACTAATGGGAACACATTTTAATTTTATAGAACCCTGGTGAAATATTCATTTTGTTGAAAGATGAAATAGATGATGAAACTTTAGAAATTGAATTCATAGCAGATAATCAACGAATTAGGACACAGCCAGCCTCTTGGAATAAGAAGGTCAAGTACATGAAAGCATTAGGTAAGAAAAAAAATCATTACTTTAAGTAAACAGAAAATGTTCTAC----TCCCTTC------ACTTTTTATAAGTAGTTTCACTTCC-------------CACTGCTTTGTAGGTGTTTCCTGTACATGGGTTTTGCATGCAGAACAT--TTATTAATAATGCAG------AGAGGCAAAGCCTTGTGATTTATGGGAAACTAGGTTCTAATAGATTGTTTTTTGTGTAGTTAAATGACA ..x...:.x:::..xxx...x.x....x::..x.x:...xx..:x:.......x..:...:....:.................xx.x....:.......:..:x..:...x...x....::.......:.:.x..::....x.:..x.....:....:.......::............:...x:..:.........x.........---..x:x.:..x.:..--.:...:..x....::..x.x.----.:.....------.:..x.x....:.:...........-------------:.:..:.:..:.............::x.:.x...::...:.xx..x:.--......x....x::.------.:.:.:..::x.x...:.x.....:....:...x----------....x.x:......:.x........ 207M3I14M2I21M4D7M6D25M13D48M2D15M6D34M10I25M 284/396 71.7% 411/94230402 0.0% 46/396 11.6% 39500329 NA +14327 chr4 + 190214555 101862463 101862462 101862889 427 TGGGTTCTTTGGTTAATGTAAACTTTTCCAAATGCTTAAATGGGTTACATTTTCATCTTACAGAATCCTGGTGAAATATTCATAATTTTGAGAGATGAAGTAATTGGTGATACTGTAGAGGTTGAATTTACATCAAGTAATAAGCGCATTAGAACACGGCCAGCCCTTTGGAATAAGAAAGTCTGGTGCATGAAAGCTTTAGGTAAG-----AATGTTTATGATTT--AATAAGCATAAAACATTATCCTGAGTTCCTTCCAATAAATTTATAATAAATGGTTTCACTTCCTTACAAAAACTAATATTGTTCTGCAGGTGTTTCCTGTGTTTAGTTTTCACATACCCAAGGTTGTTATTATTAATCTGGATTTGCAAAAGTAAGAACATGTAAATTATGAGAAATTAGT----------TTGTATACTGTGTAATGAAATGACA chr4 + 94230402 62366846 62366845 62367258 62366846 62366845 62367258 413 TGTGTTTTACAATTTCAGTACAATTTTGTGAAGGACTAATGGGGACACATTTTAATTTTATAGAACCCTGGTGAAATATTCATTTTGTTGAAAGATGAAATAGATGATGAAACTTTAGAAATTGAATTCATAGCAGACAATCAACGAATTAGGACACAGCCAGCCTCTTGGAATAAGAAGGTCAAGTACATGAAAGCATTAGGTAAGAAAAAAAAAATCATTACTTTAAGTAAACAGAAAATGTTCTAC----TCCCTTC------ACTTTTTATAAGTAGTTTCACTTCC-------------CACTGCTTTGTAGGTGTTTCCTGTACATGGGTTTTGCATGCAGAACAT--TTATTAATAATGCAG------AGAGGCAAAGCCTTGTGATTTATGGGAAACTAGGTTCTAATAGATTGTTTTTTGTGTAGTTAAATGACA ..x...:.x:::..xxx...x.x....x::..x.x:...xx...x:.......x..:...:....:.................xx.x....:.......:..:x..:...x...x....::.......:.:.x..:::...x.:..x.....:....:.......::............:...x:..:.........x.........-----..x:x.:..x.:..--.:...:..x....::..x.x.----.:.....------.:..x.x....:.:...........-------------:.:..:.:..:.............::x.:.x...::...:.xx..x:.--......x....x::.------.:.:.:..::x.x...:.x.....:....:...x----------....x.x:......:.x........ 207M5I14M2I21M4D7M6D25M13D48M2D15M6D34M10I25M 284/396 71.7% 413/94230402 0.0% 48/396 12.1% 39495617 NA +8294 chr4 + 190214555 101869860 101869859 101870861 1002 AATTCTTATATAACTTTAATTCTGCTCATATATTACAGCACAATTCACAATGTAGTGTATC---ATTCATTTTGAACAACTTGTTCTCAAAAAGGCTTTG-GATGAATGTATGATGTAAACAGTACTTCAGTATCAGGGGATTAAAC--------CTTGCCTTTCCCAGGATTTTTCATTGCAGTCAATTGAAT-----------ACAAATTGTATCATTTAAATCAGCTGTACT--------CTTTCAAATTACTAT--------TTTTGAGACACTTGCCTGTAATTAATTAAATTGTTTTCATAAGATAAATAATAAATACCTAACTTTTGATAAATGGCTATACTTTTCCAAATTCTAAAGAATTATGTAAAG--ATTATAGATTATTA------CAAAGAAAAGTTATACTAGTAAGTAAGTAGGGACAAATAATTTAGTGCTTTACTTTTATTGTTATTTTAACATGTTTTTATATTTTAAGTTTATTTTTAAGCAAATAAGTCTAAAATTGTACATTTCATTTTGT--GTTTTCCAAC--------------TACCAAGAATTTTAAAAATGATT---TTAAGT--GCTA-GAGATGAG-------TAAAAGTGTTATGAATTTTTAAAGGCTTCTTTTAT--ATTCTCTAAAAGATGTAATAGTATGAATATGCATTATATACTCTGCCCCTAACCCTTGTTTGTTTTTCATAAGAGTTTCCTGCTGGTTCAGTCCATGTCAATGTCTACTGTGATGGAATCGTTAAAGCTACAACCAAAATTAAGTACTACCCAACAGCAAAGGCAAAGGAATGCCTATTC---AGAATGGCAGATTCAGGAGAGAGTTTGTGCCAGGTAAGTTAATCTTTCCA-CGAAGTTAAT--------CATAATGTAAGCTGAAGAGCTAATGAAGGATAAGAGGATTCATGCTTTGGTATAAG----TTTGAATGTGGATTGAATAACAGTGAATTACTACCAATCAATAGGAAGGGAAGAGGCAACCTCTGTTGTGCCAAAATGCAGACAAATTACTTTGCCTAGGTCAAAAAAAAACAGATAATGTCAATGGAAAACAG chr4 + 94230402 62368400 62368399 62369401 62368400 62368399 62369401 1002 AATTTTAAGAGAACTGTGCTAGTGCTGGTATGGTACAGCAGGATGCCTGGCACAATGAATTCCAATGAATTATAAA--ACTTTCTAATAAAGAGGCCTCATGCTGCATACACAGAGCAAGTCATACTTAAGTAACAG---ATTGTACAAATGCCTCTTTCCATTACTACTTTCTTTTGCTTCTTTCCTTTGCTTCTACCAGGTAAACAACTGGAATGGAAATAATCAGTAATACTGCAACTTTTTTGCATTTTAGTACCAGTTCAATTTTGAGAACCCTGGCTGCAATTAGAAAAATG--TTTCAAAAGATGAATTGCAA--------TTTGTAATCAATGA----GCTTTTCATTAATTTGTAGACATAAGGAAGGTGATTATAGGTCATCAGCCCAACAAAGGGAAGAT----------GGAAATTGGAA-----------GTATACCATTTTCATCTACTTTCTAACATGAAGCAATAAAATAAGTCTGTCT-----CATACAGATCTACAGATACGCATTTTCTGTTGTCAGCTTTTTAATGTTAGATTGAAAGTCAACAAAAAC---AAAACTGCTCACACTAAATCATCTATGAAATGCAAATCCTATACATTTACTGTGATATTTTCTTCTGCTCTTTTATTCATTCTCTCAGATTT---CTGGTCTGGGATTGTAAAATATTTTCAGCTACTG-TTCTGATTTGTGTTTTATAAGATTTTCCTGCTGGCCCTGTATATATAAATGTCTACTGTGAGGGTGTCATTAAGACCACTGCACAGATTGAATATTATACTGCAGCAGAAGAGGTTGAGCGCATCTTTCAGAAAGTAGCTGACCCAATAGCTTTTATTTGTCAGGTAAGTTGACTTTTGCATTAAAGTTAATGAAAAAAATAGAATGTAAGT------GCTAACATGAGCTAAGAAAATGTACACCATGATGTAAAGACTTTTGCATAGTAATT-AATAATGATTCAGTAATAGTAATAATTAG-------AGAGGC--------TTGTCTC--------------TTGATATGTCTAGCTCTAAAAAAAACAGG------CAAGTGAAAACAG ....:.x.x.x....x.:x.xx....x:...:x.......x:..x.x::::::.:..x..:---..xx...x.:..--....x:.xx:...:....:.::-.x..x..::.:::x.:..::x:.....x....x...---...:x..--------...x..x..x.:.xxx.:...:::.x.xx..xx...xx.-----------....x.x.x..x:xxxx......:x:....--------:..x..xx...x..:--------........xx.:..x...:.....:xx....x--.....x.....:...x::..--------:..x.:..x....:----:......xxx.x.:.:x...xx..x.x..:.--.......:.:..:.------.....::...x.----------.x..:.x..:.-----------..::x::.:...:..:xx:x..:.......xxx:x...xxx.....:.:.:.-----..x.:.::....x.:x.:::.....:x.x....--.:...::..:--------------:.x...:..:---....x..x.:---:...:.--x...-..:...x:-------..x.xx.::.:...xx....xxxxxx:........--.......x.:.xx.---x.:..x..::xx..:.xx....x:..x..:x..:-::..x:.....x...:......x...........::.x..x:..:.x..............x..x:..:....::.:..x:.xx.:...:.:..:..:x.x:.....:.:.x::xx..::..x.x..:---.:.:.:..x..::..:x..xxxx.x.x..:..........:.::...x..-::........--------:.x........:------.....::x::.x.....::..x:.::.:x..:.:...:----....x..:xx:...-.....:::.xx.x..x..x:...x.x...-------......--------....x:.--------------..:x.x..:....x..x...........:------...xx........ 61M3I12M2D22M1I36M3D7M8I39M11I30M8I15M8I32M2D20M8D14M4D31M2I14M6I12M10D11M11D52M5D33M2I10M14I10M3D10M3I6M2I4M1I8M7I35M2I14M3D34M1D128M3I50M1I10M8I12M6D38M4I14M1D29M7D6M8D7M14D29M6D13M 572/908 63.0% 1002/94230402 0.0% 188/908 20.7% 39501460 NA +8045 chr4 + 190214555 101870087 101870086 101870861 775 TTTTGAGACACTTGCCTGTAATTAATTAAATTGTTTTCATAAGATAAATAATAAATACCTAACTTTTGATAAATGGCTATACTTTTCCAAATTCTAAAGAATTATGTAAAG--ATTATAGATTATTA------CAAAGAAAAGTTATACTAGTAAGTAAGTAGGGACAAATAATTTAGTGCTTTACTTTTATTGTTATTTTAACATGTTTTTATATTTTAAGTTTATTTTTAAGCAAATAAGTCTAAAATTGTACATTTCATTTTGT--GTTTTCCAAC--------------TACCAAGAATTTTA----------AAAATGATTT--------TAAGTGCTAGAGATGAGTAAAAGTGTTATGAATTTTTAAAGGCTTCTTTTAT--ATTCTCTAAAAGATGTAATAGTATGAATATGCATTATATACTCTGCCCCTAACCCTTGTTTGTTTTTCATAAGAGTTTCCTGCTGGTTCAGTCCATGTCAATGTCTACTGTGATGGAATCGTTAAAGCTACAACCAAAATTAAGTACTACCCAACAGCAAAGGCAAAGGAATGCCTATTC---AGAATGGCAGATTCAGGAGAGAGTTTGTGCCAGGTAAGTTAATCTTTCCA-CGAAGTTAAT--------CATAATGTAAGCTGAAGAGCTAATGAAGGATAAGAGGATTCATGCTTTGGTATAAG----TTTGAATGTGGATTGAATAACAGTGAATTACTACCAATCAATAGGAAGGGAAGAGGCAACCTCTGTTGTGCCAAAATGCAGACAAATTACTTTGCCTAGGTCAAAAAAAAACAGATAATGTCAATGGAAAACAG chr4 + 94230402 62363944 62363943 62364684 62363944 62363943 62364684 741 TTTTGAGAACCTTGGCTGCAATTAGAAAAATG--TTTCAAAAGATGAATTGCAA--------TTTGTAATCAATGA----GCTTTTCATTAATTTGTAGACATAAGGAAGGTGATTATAGGTCATCAGCCCAACAAAGGGAAGAT----------GGAAATTGGAA-----------GTATACCATTTTCATCTACTTTCTAACATGAAGCAATAAAATAAGTCTGTCT-----CATACAGATCTACAGATACGCATTTTCTGTTGTCAGCTTTTTAATGTTAGATTGAAAGTCAACAAAAACAAAACTGCTCACACAAAATCATCTATGAAATGCAAATCCTATACAT---TTACTGTGATATTTTCTTCTG-----CTCTTTTATTCATTCTCTCAGATTT---CTGGTCTGGGATTGTAAAATATTTTCAGCTACTG-TTCTGATTTGTGTTTTATAAGAGTTTCGAGCTGGCCCTGTATATATAAATGTCTACTGTGAGGGTGTCATTAAGACCACTGCACAGATTGAATATTATACTGCAGCAGAAGAGGTTGAGCGCATCTTTCAGAAAGTAGCTGACCCAATAGCTTTTATTTGTCAGGTAAGTTGACTTTTGCATTAAAGTTAATGAAAAAAATAGAATGTAAGT------GCTAACATGAGCTAAGAAAATGTACACCATGATGTAAAGACTTTTGCATAGTAATT-AATAATGATTCAGTAATAGTAATAATTAG-------AGAGGC--------TTGTCTC--------------TTGATATGTCTAGCTCTAAAAAAAACAGG------CAAGTGAAAACAG ........xx....x...:.....:xx....x--.....x.....:...x::..--------:..x.:..x....:----:......xxx.x.:.:x...xx..x.x..:.--.......:.:..:.------.....::...x.----------.x..:.x..:.-----------..::x::.:...:..:xx:x..:.......xxx:x...xxx.....:.:.:.-----..x.:.::....x.:x.:::.....:x.x....--.:...::..:--------------:.x...:..:xxx.----------.....x..:.--------:..:.x...x.x..---.x.xx...x...xxx:..:.:-----:........--.......x.:.xx.---x.:..x..::xx..:.xx....x:..x..:x..:-::..x:.....x...:...........xx.....::.x..x:..:.x..............x..x:..:....::.:..x:.xx.:...:.:..:..:x.x:.....:.:.x::xx..::..x.x..:---.:.:.:..x..::..:x..xxxx.x.x..:..........:.::...x..-::........--------:.x........:------.....::x::.x.....::..x:.::.:x..:.:...:----....x..:xx:...-.....:::.xx.x..x..x:...x.x...-------......--------....x:.--------------..:x.x..:....x..x...........:------...xx........ 32M2D20M8D14M4D31M2I14M6I12M10D11M11D52M5D33M2I10M14I14M10I10M8I14M3D21M5D9M2I14M3D34M1D128M3I50M1I10M8I12M6D38M4I14M1D29M7D6M8D7M14D29M6D13M 440/681 64.6% 741/94230402 0.0% 154/681 22.6% 39506143 NA +8619 chr4 + 190214555 101873600 101873599 101874052 453 TTTAATGATGTCTATTAGGTTTTAGAAC-------ACTAAT---CTGAATGGTTTAATTAT--CTATCTGCTTTTTTAATCATTTCATCTTTGTTAGATAAAC---ACTGAATCCCAGAACATAGCCTCATAAAGGTGAAATTTCCAGAACATCACTTAAAACAGTGAATATAAGAGAGATTCAAATGAAAGAAATCCAAAGCCCAGTTTGGGATGATAATTAGAATTGAAGTGCTAGTGTTAGAAATACTGGTAACTCCTATTGAACTAAGGTAATTAAAATCTTTGAGACTTTCATCCTATTTACAAAAATGTCTTGGGGAAATAATAAAGTTAACTTTGTAACTAGATAACAAT---------------ATAAAAGGGAAATAACATCGAAAGGCTAAAAGAACACAGTAATTATTAATTTAAGTAGTAGGATCCT----TTTCAGTAA------AAGATTTTT-GAAATGACACCAAATAATTCTTCTTA chr4 + 94230402 62370727 62370726 62371197 62370727 62370726 62371197 471 TTTAATGGTCCCCACTGGGCCATGGAGCGAGGTATATTAACTGGCTGGGTAGCTGAACTATTTCCACAGACTTTTTAAATACTTTAAGCCTT--CATGTAAACCTGATTTAATGGCAATAAGATACATTGTAAAGATGCAATTTACAGAACATGATTTAACTTAAT-CTTAAAAAATGTGTTCACACAAGGAAAAACAAAA---CAGCCTTGG-TACTAATTACAATTCCCAT-CAAGTAGCAGGAGTAGTAGTAACTTTTATTTAACTAGAATAATTAAAACCTTTGAGACTATCAGCTTATTTGCAAAAGTATCCTGGGGCAACAGT-GGTTTATCTATGCA---AAGTAACAATCAAACACAATAGAAAACAAAATTAAAATAAAATAGAAAAGCT-------TACAGTAATTGTTGATCAAAGCAGTGTCATTCTGTAGTTCAAATAAAAGTTCAAGATTTTCAGAAATG----CTTGTAATCCTTATTA .......:.x:.:.:.:..::x.:..:.-------.:...:---...::.:.:.x..:...--.:.:xx:......x...xx...x.x.:..--:.x:.....---.:.x...xx..:x.x:xx:.x.::.....:..x.....x........x.:....xx:.:.-xx..x..:.x:x:....x.::.:::...x.x...---...::.x..-.:x......x....xxx:.-.x...:x:..:.:..x.:......::....x.....:::.........:..........x...x.:.....:.....:.:..:.....x..:.:.-::x...x..x..:.---.::.......---------------.:....xx:......x..x....:...-------:.........:..:..:x...:...:xx..:..----..:x.:...------........:-......----.xx:....:...x... 28M7I6M3I17M2I29M2D9M3I60M1D34M3D9M1D19M1D95M1D14M3D10M15I27M7D33M4I9M6I9M1I6M4D16M 289/430 67.2% 471/94230402 0.0% 64/430 14.9% 39502873 NA +3146 chr4 + 190214555 101877745 101877744 101877827 83 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGACTTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.--....:.:...........::........x.xx.x..xx::...........:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 25844548 NA +7110 chr4 + 190214555 101917966 101917965 101918196 231 AAATCCTACTACTTCTTATGCTTACAGATACTCATTTCAAAGAACTTCCAACTCTTCTCCACTGTGCAGCAAAATTTGGCTTAAAGAACCTGGCTATTCATTTGCTTCAATGTTCAGGAGCAACCTGGGCATCTAAGATGAAAAATATGGAGGGTTCAGACCCCGCACATATTGCTGAAAGGCATGGTCACAAAGAACTCAAGAAAATCTTCGAAGACTTTTCAGTAAGTT chr4 + 94230402 62383856 62383855 62384086 62383856 62383855 62384086 231 AAAGCTTTGTTTTTTTTTTTTACACAGATAGACATTTGGAAGAATTTCCCACTCTCCTTCACTGTGCAGCCAGATTTGGATTAAAGAACCTCGCAGCAGTTCTACTCAAGCATCCCGAGGCTGCAAAGGCTTGTAAAATCTCCAATACAGATGGAGATGTTCCAGCAAGTATAGCTGAGAAGCATGGACACAAGGAAATAAGAGAATTAATCAAAGAATTGTTGGTATGTT ...x.:.xx.x:..:..x.x:x:.......xx.....x:.....:....x.....:..:...........x.:......x...........x..x::xxx.:.:..:x.:::.:.x.::..x:.xx:...x.x...:..xxxx....::..x..xxxx.x:..x...x:...x.....:.:......x.....:...x.x.:::..x.xx..:....x..x.::...x... 231M 147/231 63.6% 231/94230402 0.0% 0/231 0.0% 39534110 NA +7794 chr4 + 190214555 101924160 101924159 101924453 294 TTATTTAGAAAAACTGTCCTTAGGCTATTCATCAGTAGAATGTTCATT-AGGAAAGAGATTTCTCATGTCTACTAAGCCCAGTGTGTGAGACTGCTTAAAGTAATCTCTTTCTCCCAGAAATCATGTTAGTTTGGTTTAACAGAGTAAAGCAAAAACCCCATTTGTAATTCTCAGGAATAACTATTCTCAGATGTCACAGCC--------GCTGTTTTCTC----------AGTGTTTTGCTATGTAATAAATGATTTATATTTTCATA---AAGTTGCTAGAATAGCAATCAGTGTCTGTACACTCTCTTTCCAT chr4 + 94230402 62394795 62394794 62395106 62394795 62394794 62395106 312 TTAATTAGAAAAATTGTCTTTAGGCTCTACATCAATGGAATGACCACTGGGGAAAGGCATTTCTCAAAGTTACCAAGCCCATTATATGAAACTGCTTTATAAAATCCATTTGTGCCCTGCATACCATTAGTTCTGCTTAATACAGCTGTGAACAGTCTCCATCTATAATTCT----GATGATCCTGCACAGAAGGCACAATCTTTGTTTTGCTGCCTTCTCTTCCCACCCACATATATTATTCTACAATAAATGATTCAGTATTTCATACCCAAGACTCTAGGGGACCTAGCAGTATCATTTTGCTTTTCTTGTAT ...x.........:....:.......x.x.....:.:.....x:..:.-:......:x........x:x:...:.......x.:.:...:.......x.x:x....:x...x.x..xx:x..xx::......:x.:....:.x..:x:x.x.x.:x.:....:.:.......----:..:.::x.x.x....x.x....::.--------....::.....----------x:.:.x..::.x.::...........:.xxx.......---...x:x....::x.x.x.x....:..xx.x::..:.::..x:.. 48M1I123M4D26M8I11M10I38M3I44M 190/290 65.5% 312/94230402 0.0% 26/290 9.0% 39529365 NA +3667 chr4 + 190214555 101936233 101936232 101936332 100 GATATGTATACATATATGACACACATACATGTATGCATACATG--TATATGTACACATATATGCACACATACATGCATATGTACACATATGTATCCATACAT chr4 + 94230402 25672278 25672277 25672379 25672278 25672277 25672379 102 GATATATATGTATATATGGCATAAAGAGAAAAATGTGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT .....:...::.......:..:.x.x.x.x:x...::..::..--.:..x:.x:..xx.........:.....:.......:.::.x.:...::x:..:... 43M2I57M 66/100 66.0% 102/94230402 0.0% 2/100 2.0% 76263955 NA +3067 chr4 + 190214555 101950023 101950022 101950085 63 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCGCGCGCA--------TGTGCCTACA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx...:.:.:::.:::..:....:.:....--------....:.:... 53M8I10M 46/63 73.0% 71/94230402 0.0% 8/63 12.7% 22684504 NA +3848 chr4 + 190214555 101986701 101986700 101986914 214 TTTCATGTCAAACTTATTTCTCATTTACTCTTTCTTCTAATGTGATTGATCCTCTGCTACATAGGAAGGTTTTAAATTATATATGTGT-GTATATATATGTGTA-----------TATATATGTATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGTGTAT----GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812840 89812839 89813060 89812840 89812839 89813060 221 TTTCTGGTTAAATTTATTAAATATTTCCTGTTCAGT------TGATT--TCTTATACTGGTAATCAAGCTGTCAAGATTTCTGTGTGTTGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ....xx..:...:.....xxx:....x..x..:xx.------.....--..:.x.:..:xxx.xx...x.x.:..:x.x.x.:.....-...:.:.x:::..x.-----------.x.......xx:.:.x....-::.....x:..x....:...:...x..x...:x.xx...:.....::x.:----:..:..:...x:x...................:.x..x.. 36M6D5M2D39M1I15M11I20M1D50M4I40M 135/205 65.9% 221/94230402 0.0% 25/205 12.2% 12173861 NA +4139 chr4 + 190214555 101986753 101986752 101986903 151 TCTGCTACATAGGAAGGTTTTAAATTATATATGTGTGTATATATATGTGTATATATATGTA------TATATATGTGTATATATATGTATATATATGTG----TATATATATGTATATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATA chr4 + 94230402 21109171 21109170 21109328 21109171 21109170 21109328 158 TCTGAAAAATAAGGAAATTT--GCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ....xx.x...:.:.::...--:x.....:........x.x.:.:x.:....x........------....:x:.....:x....:....:..:x::..----.:.:.......:...:x.....::..:.:::.x.xx.:::-..x.x....x.....:. 20M2D39M6I32M4I40M1D17M 99/148 66.9% 158/94230402 0.0% 13/148 8.8% 80877582 NA +3018 chr4 + 190214555 101986841 101986840 101986906 66 ATGTGTATATATATGTATATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:....:xx.:.:..:.:x.:x.:x.:x:.............:.........::..::...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 74661350 NA +3130 chr4 + 190214555 101986855 101986854 101986925 71 GTATATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 39131747 39131746 39131817 39131747 39131746 39131817 71 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x.:..:::.x......x...x.x.......:x.....::.....x..x..::..x...x:.......:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 62855108 NA +3054 chr4 + 190214555 101986858 101986857 101986936 79 TATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAGTAGG chr4 + 94230402 39937175 39937174 39937253 39937175 39937174 39937253 79 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCATTTGG ................:...x......::xxx.x.:::.::xxx:...:.:...:.......:...x..:.::.x.x.. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 62049683 NA +3006 chr4 + 190214555 101986860 101986859 101986911 52 TATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 65759986 65759985 65760037 65759986 65759985 65760037 52 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ..x..x....x......:........::.:::...x........:....:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 36226874 NA +3389 chr4 + 190214555 101986860 101986859 101986931 72 TATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834604 85834533 85834532 85834604 72 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA ...x:..x.....x.................:.xx:...:x::...:....:..x...:..:.x...::.:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 16152327 NA +3187 chr4 + 190214555 101986862 101986861 101986931 70 TATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834602 85834533 85834532 85834602 70 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...x::.x...:.x.................:.xx:....x::...:....:..x...:..:.x...::. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 16152329 NA +3006 chr4 + 190214555 101986890 101986889 101986935 46 TGTGTGTGTGTATATATATATATATATATATATATATATATAGTAG chr4 + 94230402 48958675 48958674 48958720 48958675 48958674 48958720 46 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAG .......x......:........:.:.:........x....:.x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 53028215 NA +3022 chr4 + 190214555 101991787 101991786 101991850 64 GTCTATGTGTATGTTTGTGTTTGTACACATACGTGTGTATTTGCACATACATGTACATGTCTGG chr4 + 94230402 86633929 86633928 86633992 86633929 86633928 86633992 64 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGG ..x::..:...x..x.:........:....:.........x.:..:x.::...:.:x...x... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 15357858 NA +3596 chr4 + 190214555 102003880 102003879 102003985 106 TATGTATATACATATATGTGTGTATATATGTATGTATACATATATGTATATGTGTATATACGTATATATACACACATATATGTGTATACATCT--ATATACATACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...::..:.:::.x.x....x.::...x.:......:x..:....::x::...::x.........:..:x..::.x.x.:...:...:::.x.--....:...:.... 93M2I13M 67/106 63.2% 108/94230402 0.0% 2/106 1.9% 80894686 NA +3095 chr4 + 190214555 102018764 102018763 102018833 70 AAGCAAATGAATAAAACTTTTGCTCTGATCATCTATTTCTTTTCTTTCTTTCTTTCCTTTTTTTTTTTTT chr4 + 94230402 91449140 91449139 91449209 91449140 91449139 91449209 70 AAGGTAATGAACAAGACATGAGTCATGGCTATCTTGTTCTTTTCTTTCATTCTTTTTTTCTTCTTCTTTT ...xx......:..:..x.xx.::x..:::....xx............x......::..:..:..:.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 10569624 NA +3035 chr4 + 190214555 102025696 102025695 102025749 54 TTCTTTTGTTTCTTATTTCCTTGCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTC chr4 + 94230402 13214822 13214821 13214875 13214822 13214821 13214875 54 TTCTTATGTTCCTTAGTTCATTGCTTGCCTTCTTCCCTCCTTTCTGTCTCTCTC .....x....:....x...x......x.:.:.....:....::..x:...:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 88810874 NA +3330 chr4 + 190214555 102057342 102057341 102057400 59 CTCTCTCTCGCTTTCTCTCTCTCTCTCTTTTTTTTTCTTAAGCAAGGTCTGCTCTGTCA chr4 + 94230402 80571112 80571111 80571170 80571112 80571111 80571170 59 CTCCCTCTTTCTCCCTCTCCCCCTCCCTTTTTGTTTCTTAAACAAGGTTGGTTTTGCTA ...:....:x..::.....:.:...:......x........:......:x.:.:..::. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 21486230 NA +3559 chr4 + 190214555 102063062 102063061 102063190 129 TTTCCACATTAAGGAGAAATTACGACAACTACGAGACTGCATTATTGGGAAAAGGCCAGAAGAAGAAAATGTCTATAGTAAGTAAGATTCGCCT---GCTATTCAAAAATAATAGAGTGATTACGTTGAAAA chr4 + 94230402 62477614 62477613 62477745 62477614 62477613 62477745 132 TTTTTATTTAAAGGATAAATTGTGCCACCTTAGAGCCACCAGTACTGGGAAGAGACTAGAAAAGGAAAATCTGGATGGTAAGTTACACTTTCTTTTGGCTTTCAAAACACCAAAGACTTGTGATGTTAATAA ...::.:x.x.....x.....::.x..x..xx...x.xx..x..:......:..:.:....:.:......x.xx..:......x.x.:.:x.:.---...x.:x...x.:x.x...x.x:.x.:...:.x.. 94M3I35M 83/129 64.3% 132/94230402 0.0% 3/129 2.3% 39585448 NA +3170 chr4 + 190214555 102063808 102063807 102063882 75 GACTCTATCTCAAAAAAAAAAAAAAAAAGAAATGAAATGATTAAAGAGACATGCTTTTTAATAAGTTAAAATATT chr4 + 94230402 6702365 6702364 6702439 6702365 6702364 6702439 75 GATTCTATCTTAAAAAAAAAAAAAAAAGCAAATGCATATAGTAGAGAAAAAGGCCACTTCATACTTCAGGATATT ..:.......:................:x.....x.xxx.x..:...:.x.x..:x:..x...xx.:.::..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 95361443 NA +9822 chr4 + 190214555 102081512 102081511 102081774 263 AGAAGAAGAAAGGAAGAAAGAAGAAATGAAGAGAAGAAAGAAAAA-----GAGAAAGAAAGAAAGAGAGACAGAGGGAAGGAAGGAAGGAAGGAAGG-GGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGAGAAAAGGAAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGAAAGAGGGAGGGAGGAGGGAGGGAGGA--AGGAAGGAAGGAAGAGAGGAAGGGAGGGAGGGAGGAAGGGAAAAGAAG chr4 + 94230402 1500704 1500703 1500971 1500704 1500703 1500971 268 AAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGG--GAAAAAACAGGAGGGAACGAAG-GGGGAAAAGAAG .::..........x:.:::......:...:.:....:.:......-----..:..:..:.:.x..:.:.xx.x.x.:::....x:..........::-....:::..::.:.::..::.x....:x...:....:..:::::...:.::.:.::.......:..:.:.::.:..x:..:...::..:::.....:......:.....::..::.::..::.--:....:.....--..:.::.x:.......:x..:.-:........... 45M5I47M1I123M2I11M2D22M1D12M 169/260 65.0% 268/94230402 0.0% 11/260 4.2% 100580808 89633747 +3428 chr4 + 190214555 102081562 102081561 102081670 109 AGAAAGAAAGAGAGACAGAGGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGG--AAGGGAAGGGAGAAAAGGAAGGAAGGAGAG chr4 + 94230402 32737813 32737812 32737921 32737813 32737812 32737921 109 AGAAAGCACGAGAGAGAAAGGGGAGGGAAGACTCAGGAAGGGGGATAAGAGGGAAATG--TTATGAAGGGAGATGACTGCCATGGCAAGTGAGAATAAGAGAGAGGGAGAG ......x.x......x.:....:...:.:..xxx.:.:.:.....x::..:.....x.--xx.x.:.:.....x..xx.--.x..x...x.....x.:..::..:...... 58M2D19M2I30M 73/107 68.2% 109/94230402 0.0% 4/107 3.7% 69343749 NA +3167 chr4 + 190214555 102081567 102081566 102081705 139 GAAAGAG-----AGACAGAGGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGAGAAAAGGAAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGAAAGAG chr4 + 94230402 64206442 64206441 64206585 64206442 64206441 64206585 144 GAAAGAGCACGTGGACAGAGGGGATTGCACAATATGGAAACAATAAGGGAAGCAAAAAGGTGAAGAAAAGAATGGAGGGAAAAGAGTAAGCAGAAACTTTGATGTAAAGAACAAAGAATGGACTAAACTGGAAAATAGAATGAG .......-----:.........:.xx:x:x..x:x:.:..x::x........x...::.:x....:..:..:x........::..:x:::x.:..:xxxx..x.x.:...:x:.....x:..xx...xx.:..:.x....x... 7M5I132M 83/139 59.7% 144/94230402 0.0% 5/139 3.6% 37875125 NA +3864 chr4 + 190214555 102081618 102081617 102081791 174 GGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGAGAAAAGGAAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGAAAGAGGGAGGGAGGAGGGAGGGAGGAAGGAAGGAA--GGAAGAGAGGAAGGGAGGG---AGGGAGGAAGGGAAAAGA-----AGAAACAAAAAATAAATGG chr4 + 94230402 59372550 59372549 59372733 59372550 59372549 59372733 184 GGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGG .....:...x..x.x....:.:::x::x.:.:::.....:x.xx...:.x:.x::.x..x.....:.....x.:x..x..x:.x:::...:.x....:....:.:.::..:x..x:..--....:.x..x..x::.:..---..x:.x:..:......x.-----..:..x...x..:...x.. 118M2I19M3I18M5I19M 106/174 60.9% 184/94230402 0.0% 10/174 5.7% 42709068 NA +3280 chr4 + 190214555 102081659 102081658 102081701 43 AAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGAA chr4 + 94230402 29014690 29014689 29014732 29014690 29014689 29014732 43 AAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAA .......::.:.....:......:................:.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 73066969 NA +3149 chr4 + 190214555 102081699 102081698 102081786 88 GAAAGAGGGAGGGAGGAGGGAGGGAGGAAGGAAGGAAGGAAGAGAGGAAGGGAGGGAGGGAGGAAGGGAAAAGAAGAAACAAAAAATA chr4 + 94230402 32441849 32441848 32441936 32441849 32441848 32441936 88 gagcgcggcAGGGCTGCACGGGGGCGAAAGGAGAGAGAAAAGGGATGAGGGGAAGGAGCGGGGGGGGGGGAGGAATAATCGATAAACA ..:x.x..x....xx.x:x.:...x.:.....::..:::...:..x..:....:....x.:..::...::.:...x..x.:.x...:. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 69639850 NA +3486 chr4 + 190214555 102081953 102081952 102082019 67 TGTAGTTTCAGCTACTTGAGAGGCTGAGGCTGGAAGATCCCTTGAGCCCAGGAGTTTGAGACCACAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:...........:........x.:x.x::.x.x.....:.....:..:..x:.:.:::.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 26048742 NA +3580 chr4 + 190214555 102119675 102119674 102119796 122 TTGGGTCTTCCTTTCTTAGTTATTCTGAC-----TAAAG------GTTTGTTTTTGTTCCTTTGATCTTTTGTATTGTTTTCTTCTTTTCGATGTCATTTATTTCTGCTTTGATATTTATTATTTATTTTATT chr4 + 94230402 7526181 7526180 7526313 7526181 7526180 7526313 133 TTGGGTTTATATCCCTTTGTTTTTCTGTCCCTTCTGAGGCTTTTAATTTCCTTTGGTTTCTTTGCTCTTTTGTTTTGTTTTACAAATCCTTATTTAATTTATCCCTGCTTTGGAAATTCTAATTTCTGTTATT ......:.x:x.::...x...x.....x.-----.:.:.------:...x:...x...:.....x........x.......x:xxx.:::x..x.x......::........:x.x..x.x....x.x..... 29M5I5M6I88M 84/122 68.9% 133/94230402 0.0% 11/122 9.0% 94593494 NA +3089 chr4 + 190214555 102132388 102132387 102132470 83 CATGGTGGCCGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 26099191 NA +3495 chr4 + 190214555 102154340 102154339 102154418 79 GTGGCGCGTGCTTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGCACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:..::.--....:.:...........:.........x.xx.x...x::....x......:..x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 26121139 NA +3453 chr4 + 190214555 102157735 102157734 102157806 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.:.......:...:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 26124529 NA +3159 chr4 + 190214555 102157852 102157851 102157978 127 AGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAAAAAATTCATGCGACCCTTCAGAAACTTCGACCATAGA-ATTAAATAAACAGTT chr4 + 94230402 54037015 54037014 54037138 54037015 54037014 54037138 124 AAAGTCCATTTTCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGA--TGAAACAACTC--CAATAATGCCCACTAAAGattttaaataaatattt .:.x...:.:.:xx::.::.....:..........:......x:..:.xx:..:.:x...::.x...:.:......:.--.x.x:.:..:.--..:x..:x:.x..:.x...-x.........:.x.. 78M2D11M2D19M1I15M 79/123 64.2% 124/94230402 0.0% 5/123 4.1% 48120837 NA +3083 chr4 + 190214555 102162963 102162962 102163010 48 TAAATAAATAAATAAATAAATAAAAAGAAAAAAAGAAGGTAAAAGATA chr4 + 94230402 49774062 49774061 49774109 49774062 49774061 49774109 48 TAAATAAGTATATAAATAAATAAAGAGGAAGGAAAAGGGCAAAAAATA .......:..x.............:..:..::..:.:..:....:... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 52388901 NA +3055 chr4 + 190214555 102164586 102164585 102164626 41 ATGACTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGAG chr4 + 94230402 22359251 22359250 22359291 22359251 22359250 22359291 41 ATGATTTTACTTTTTTTGTTTGTTTGTTTTTTGAGACAGAG ....:...xx...x........................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 79805335 NA +3100 chr4 + 190214555 102174094 102174093 102174150 57 CAAAACTGACCAAAGAAGAAATCTAATATTTCTTTTTCTTTTTCTTTTTTTTTCTTT chr4 + 94230402 80468454 80468453 80468510 80468454 80468453 80468510 57 CAAAAATAACTGTAGATAAAACAGAATGTTTCTTCTTCTTCTTCTTTTTTTTTTTTT .....x.:..::x...x:...:xx...:......:.....:............:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 21705640 NA +3111 chr4 + 190214555 102185667 102185666 102185762 96 AAAAACTCAGCAACATAGCCACAAGAGATATGCATGCATATACACACAACAGACACACACACACACACACACACACACACACACACACCGTTTTCT chr4 + 94230402 85246714 85246713 85246807 85246714 85246713 85246807 94 AAAAGGTCA--AATGCATTTGCAGAAGATAAGCACACTTCTCAAAACAGCAGAGACAAACACACACGCACACACACACAGGAACAGAAAAATTTCT ....:x...--..:::.x:::..::.....x...::.x.x.xx.x...:....x...x........:............x:x...x.xx:x..... 9M2D85M 63/94 67.0% 94/94230402 0.0% 2/94 2.1% 16938953 NA +3613 chr4 + 190214555 102197192 102197191 102197274 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:...........::.......:x.xx.x...x::...........:..x:xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 26163995 NA +3407 chr4 + 190214555 102197322 102197321 102197370 49 ACTCCGTCTCAAAAAACAAACAAACAAACAACAACAATAACAAAAATCA chr4 + 94230402 29430291 29430290 29430339 29430291 29430290 29430339 49 ACTATGTTTCAGGAAACAAACAAACAAACAACAACAACAACAAAATCCA ...x:..:...::........................:.......x:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 72767031 NA +3064 chr4 + 190214555 102197324 102197323 102197368 45 TCCGTCTCAAAAAACAAACAAACAAACAACAACAATAACAAAAAT chr4 + 94230402 89758353 89758352 89758397 89758353 89758352 89758397 45 TCCATCATCTGAAACAAACAAACAAACAACAACAACAACAAAAAT ...:..x:xx:........................:......... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 12438971 NA +3080 chr4 + 190214555 102222328 102222327 102222388 61 TTCTTTTCTTTTATCTTTTTTTCTTTTCCCTTTTTTCCTTCCTGTTTTTTTATTCTTCTTT chr4 + 94230402 33280075 33280074 33280135 33280075 33280074 33280135 61 TTATTTTTTGTTAAGTCTTCTTCCGTTCCTTTTTTTTTTTCCTCTGTTTTTATTCTACTTT ..x....:.x...xx.:..:...:x....:......::.....x.x..........x.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 68942253 NA +10785 chr4 + 190214555 102262981 102262980 102263316 336 CCTTTTTGGA-----GATGTTTTT--------ATCTATTAAATGCCTTTATTAACAACACCATCTTCCATTTTCTATTACTCCAATTCGATTTCTCCTGCATACAAGGTAATGAGTAGAATGGCTGTGAATCCAGTTAACATTCCAGCATTCTGAATCATGAAGAAGGTGAAATCGGTTTTTCTTCCAGTTACCTTTTCTCTCAGCATATCATTCATCTCTGGAAACTAGAAGACAGATATATTGTTAGATAACTGTTGCCATCTTGTGGCAAACCACAAAAC----AGTCACTTAGAGGCATACCTTGGAGACAGTGTGGGTTTGGTTCCAGACCAGTGTGATAAAGCAAAC chr4 + 94230402 62536155 62536154 62536492 62536155 62536154 62536492 338 CCTTTATGGATTTCAAATGTCTTCCATTCATAATTTACTTGACGTCTTCAACACCGATTCCATTTTCA--CTTGCATTATCACAGCTGAATATTTCCTTCATACAAGGTAATCAACAGTATAGCAGCAAACCCCGTTAGTAAACCAGCATTCTGAATAAGGAAGAATGTGAGATCCATCTTTCTTCCTGTCACTTTCTCTCTCAGCATATCATTCATCTCCGGGAACTGAAAAAGCGG-ATAATTTTAGGTAAGTATTGCCATCTTGTGGTAGCACGTGTAACTCAAGGCCATTT-----CAGAACTGGAACATACTGCTGTTTTGG-------ACTGAGTAATAGAACAAAC .....x....-----:....:..:--------..:..:.x:.:.:...:.x:.x.:.:x....:...x--:..x:....::x..::.x:..x.:....x.............x.::..x..:..x.::..:..x....::.xx..............x.x......x....:...x:.:........x..:..:..:.......................:..:....::..:.xx.:-...x.x....:...x.:..............:.:xx.:::x...----:.:..:..-----..x.x..x.:.x.:.x..:x.x.....-------x.x.x..:...:.:..... 10M5I9M8I36M2D168M1D44M4I8M5D27M7D19M 224/321 69.8% 338/94230402 0.0% 32/321 10.0% 39726826 NA +10876 chr4 + 190214555 102262981 102262980 102263317 337 CCTTTTTGGA-----GATGTTTTT--------ATCTATTAAATGCCTTTATTAACAACACCATCTTCCATTTTCTATTACTCCAATTCGATTTCTCCTGCATACAAGGTAATGAGTAGAATGGCTGTGAATCCAGTTAACATTCCAGCATTCTGAATCATGAAGAAGGTGAAATCGGTTTTTCTTCCAGTTACCTTTTCTCTCAGCATATCATTCATCTCTGGAAACTAGAAGACAGATATATTGTTAGATAACTGTTGCCATCTTGTGGCAAACCACAAAAC----AGTCACTTAGAGGCATACCTTGGAGACAGTGTGGGTTTGGTTCCAGACCAGTGTGATAAAGCAAACA chr4 + 94230402 62526450 62526449 62526788 62526450 62526449 62526788 339 CCTTTATGGATTTCAAATGTCTTCCATTCATAATTTACTTGACGTCTTCAACACCGATTCCATTTTCA--CTTGCATTATCACAGCTGAATATTTCCTTCATACAAGGTAATCAACAGTATAGCAGCAAACCCCGTTAGTAAACCAGCATTCTGAATAAGGAAGAATGTGAGATCCATCTTTCTTCCTGTCACTTTCTCTCTCAGCATATCATTCATCTCCGGGAACTGAAAAAGCGG-ATAATTTTAGGTAAGTATTGCCATCTTGTGGTAGCACGTGTAACTCAAGGCCATTT-----CAGAACTGGAACATACTGCTGTTTTGG-------ACTGAGTAATAGAACAAACA .....x....-----:....:..:--------..:..:.x:.:.:...:.x:.x.:.:x....:...x--:..x:....::x..::.x:..x.:....x.............x.::..x..:..x.::..:..x....::.xx..............x.x......x....:...x:.:........x..:..:..:.......................:..:....::..:.xx.:-...x.x....:...x.:..............:.:xx.:::x...----:.:..:..-----..x.x..x.:.x.:.x..:x.x.....-------x.x.x..:...:.:...... 10M5I9M8I36M2D168M1D44M4I8M5D27M7D20M 225/322 69.9% 339/94230402 0.0% 32/322 9.9% 39736531 NA +12972 chr4 + 190214555 102267453 102267452 102267693 241 TTAAATTAAAAGAAAATACAAATTTTAAGCTTCTTACCATATCTGCCAGAGAAATATAGAGGAACATGCCTCCAGCAAGTGCAAATATAATATTTGGAGCGAAATTGTTGCCCACCAAAATGCCAAAAGCTAGCCCAACATAGCAGGAACATGCAGAAAGGAAGTTGAATAGCAAGGCTTGTCGAGTGCTCATCCCTGCATTGAGTAGGATCACAAAGTCTCCTAGAAGAAGAAGAAGAAA chr4 + 94230402 62538990 62538989 62539225 62538990 62538989 62539225 236 TTAAATGACTGAAAAATG-AAATTCT----TTCTCACCATATCTGCCAGAGAGATGTACAGGAACATTCCACCAGCTACAGCAAAAATGATGGTAGGAGCGAAGTTGTTGCCTACTAATATACCAAGAGCCATCCCAATGTAACAGGAACATGCAGACAGAAAGTTGAAAAACAGAGCCTGTCGAATACTCATTCCGGCATTAAGTAAGATGACAAAATCCCCTAATAGAGAAAAAAGAAA ......x.xx::.....:-.....:.----....:.................:..:..x........x..x.....x.xx.....x..:..:x.x........:........:..:..x..:....:...:.x.....::..:..............x..:........x.:..::..:......:.:.....:..x.....:....:...x.....:..:....:x...::..:...... 18M1D7M4D211M 183/236 77.5% 236/94230402 0.0% 5/236 2.1% 39728463 NA +12140 chr4 + 190214555 102267817 102267816 102268104 288 TTCCACTGAAATCAAGAAGTAAGCAGACTTTTACAATATGAACAGAGCTCCTTACCTAACTCGTGGGGAAACTCCTCACATAGGATTGCTATGGAAGTACTGAGTCCCTGAAGGAGAGACAAGGTGCAGGAAGCCCCAATCGCCAGGCCATCGATGAAATTGTGGAGGGCATCGCAGAGCGTTATCATCCAGGCAATCGTCCCTATTTCTGACAGTTTGGGCCCCTTCAAACAGGTACATGAACTTGGCTCTTTTTTTCCATCCTAGCAGAAAATCA-ATTAAAATGAT chr4 + 94230402 62539751 62539750 62540021 62539751 62539750 62540021 271 TTCCACAGAAATCAATACGT------------------TGAATGAAGCTTCTTACCCAGCTCGTGAGGAAACTCTTCACACAAGATGGCTATGGAGGTACTAAGTCCTTGAAACAGAGACAAAGTGAAAGAAGCACCGATTGCCAAACCATCTAAGAAATTATGTACGGCATCACTCAGTGTTACCATCCAAGCAATGGTTCCAATCTTTGACAGTGGGCGCCCACCGAGACATTTACACAAACTGCCCTGGACTGCTTCTTCCTGGAAAAACAACACACTAAAATAAT ......x........x.x..------------------....:::....:......:.:......:........:.....:.:...x........:.....:.....:....:x........:...x.:.....x..:..:....::.....x.x......:..x.x......:.xx..:....:......:.....x..:..x..:.:.......xx.x....x::x.:...xx....::....xxx..xxx:.x:.:.x....:.x.:..x.x..-.:......:.. 20M18D239M1I11M 197/270 73.0% 271/94230402 0.0% 19/270 7.0% 39728066 NA +5713 chr4 + 190214555 102304285 102304284 102304551 267 TATAAT--GAAGGAAAAATGGAATTAACAT--ATACCTGTAGAGATACCACACTGACATTATCAAAATGGATATGTCCATTAGCTTCTGTGACAGCAGGATTTGCATAGCATGTCACACCATTGATGGCAGGTAATGCTTTAGGTTGATGAGTTTTTTCTTGAG---GACCAAAGTTATCATTTCCAAAGTGGGTATGACCATTCTATATGGGAA--CAAAAACCAAAGAGATTATAAGAAGAAAAAAGATGATTCATACAGACAAGGAAATAGAG chr4 + 94230402 62545761 62545760 62546028 62545761 62545760 62546028 268 TATAATAGGTAGGAATAAAACAGATAATTTTCATACCTGTGCTGAGACAACACTGATGCTGTCAAAACCAAAATTTCCATTGCTCTCTACAATGGCTGAATTTGCATAACAAGTCACCCCATTGCTGGATGATGGTGGTTTGGAGGGACTAGTCTTATCCTTAGATTGATTCTCTTCACCATTTTCTACGTCATTATGGCCAGGCTGGATGACAAATAAATAAGTAGGTAGCTTATTAAATAAAAAGTGA--------AATAACAAAGAAATACAG ......--.x.....x..x:x.:x...:x.--........:xx..x..x.......:::.:......:x:.x..x......:x::...:::.::..x.:.........:..x.....x......x...xx.:.::..x...:.:xx..:x...:..x..:.x..---..::xxxx.:.:.....:.x.x..x:x....:...xx..:x...:x..--x..x..x:.::x..x....x.:.x:....:x..--------.xx:....:......x.. 6M2I22M2I132M3I48M2I33M8D18M 165/259 63.7% 268/94230402 0.0% 17/259 6.6% 39758524 NA +8493 chr4 + 190214555 102304985 102304984 102305170 186 TTACCTGACCATATGTCTTTAATAACATCTTTAGCATTCTTTCAAAAAAGAAAAGTAGGTAAAATCCACCAAACACAGCAACTGCCTTCTCAACATAACTGTCGACTTTGGGATCAAATCCAAATGCCTAAGGGAGAAAAAAGGGCAATTCAAGTAAAACCAAGAAATTTAACTTGATTTCTGGAA chr4 + 94230402 62549771 62549770 62549953 62549771 62549770 62549953 183 TTACCTGATTATAGATCTTTAGTATCACTTTAAGAATCCTTTCCACAAAGAAGAGAATATAGAATCCACCAAACACAGCAACTGCTTTCTCAATGTAGTTATCTACATGGGAATCAAATCCAAATGCCTAACAGA-AGATAAAAGCAATGCAAATTAGATT--GAAATCTTAGTACATTTCCATAA ........::...x:......:..x..::..x..x..:.....x.x......:..x.x:..:.......................:.......::..::.:..x..x.x..:...................x:..-.:.x..::.....x...:.x.:.::--.....:.x.x.xx.....::x.. 135M1D25M2D23M 135/183 73.8% 183/94230402 0.0% 3/183 1.6% 39755214 NA +8624 chr4 + 190214555 102304985 102304984 102305170 186 TTACCTGACCATATGTCTTTAATAACATCTTTAGCATTCTTTCAAAAAAGAAAAGTAGGTAAAATCCACCAAACACAGCAACTGCCTTCTCAACATAACTGTCGACTTTGGGATCAAATCCAAATGCCTAAGGGAGAAAAAAGGGCAATTCAAGTAAAACCAAGAAATTTAACTTGATTTCTGGAA chr4 + 94230402 62547122 62547121 62547304 62547122 62547121 62547304 183 TTACCTGATTATAGATCTTTAGTATCACTTTAAGAATCCTTTCCACAAAGAAGAGAATATAGAATCCACCAAACACAGCAACTGCTTTCTCAATGTAGTTATCTACATGGGAATCAAATCCAAATGCCTAACAGA-AGATAAAAGCAATGCAAATTAGACT--GAAATCTTAGTACATTTCCATAA ........::...x:......:..x..::..x..x..:.....x.x......:..x.x:..:.......................:.......::..::.:..x..x.x..:...................x:..-.:.x..::.....x...:.x.:..:--.....:.x.x.xx.....::x.. 135M1D25M2D23M 136/183 74.3% 183/94230402 0.0% 3/183 1.6% 39757863 NA +12872 chr4 + 190214555 102307395 102307394 102307623 229 AGAAACAATTATTCACAGAAACAAATAGCCAACATCCTTACCTCTGGAATAAGTTGGAAAATTGCATTTGAAAAAAGAGTCCCAATAGCCAGCCCCACAAAAAAGGTCAAAATCTTTGGGAAATAAGATTTCTTTATCAGTGGAGTCAAAATCAATCCGAGGAGAGATGCCAGATTAATAATCGTCACTGACAGGAATCCATATCCCCAAACTGTGGGTCAGAGGGAAA chr4 + 94230402 62547747 62547746 62547975 62547747 62547746 62547975 229 AGAAACTATTATACAAAAAAGTAAAGATTTTCCTTGCTTACCTCTGGAATGAGCTGGAAAATTGCATTAGAAAAGAGAGTACCGACGGCCAAGCCCACAAAGTAGGTTAAAATCTTAGGGAAATAAGATTTCTTTAAGAGAGGAGTTAAAATAAATCCCAGAAGCGATGCCAAGTTAATGATAGTCACAGCTAGGAACCCAAATCCCCAAACTGTGGATAAAAAACAAA ......x.....x..x.:..::...x.x::xx.x.x..............:..:..............x.....:.....x..:.::....:x........:x....:........x...................xx..x.....:.....x.....x..:..x.......::.....:..x.....x.x:.....:...x...............:.x.:.::x... 229M 178/229 77.7% 229/94230402 0.0% 0/229 0.0% 39759648 NA +13003 chr4 + 190214555 102307395 102307394 102307623 229 AGAAACAATTATTCACAGAAACAAATAGCCAACATCCTTACCTCTGGAATAAGTTGGAAAATTGCATTTGAAAAAAGAGTCCCAATAGCCAGCCCCACAAAAAAGGTCAAAATCTTTGGGAAATAAGATTTCTTTATCAGTGGAGTCAAAATCAATCCGAGGAGAGATGCCAGATTAATAATCGTCACTGACAGGAATCCATATCCCCAAACTGTGGGTCAGAGGGAAA chr4 + 94230402 62550396 62550395 62550624 62550396 62550395 62550624 229 AGAAACTATTATACAAAGAAGTAAAGATTTTCCTTGCTTACCTCTGGAATGAGCTGGAAAATTGCATTAGAAAAGAGAGTACCGACGGCCAAGCCCACAAAGTAGGTTAAAATCTTAGGGAAATAAGATTTCTTTAAGAGAGGAGTTAAAATAAATCCCAGAAGCGATGCCAAGTTAATGATAGTCACAGCTAGGAACCCAAATCCCCAAACTGTGGATAAAAAACAAA ......x.....x..x....::...x.x::xx.x.x..............:..:..............x.....:.....x..:.::....:x........:x....:........x...................xx..x.....:.....x.....x..:..x.......::.....:..x.....x.x:.....:...x...............:.x.:.::x... 229M 179/229 78.2% 229/94230402 0.0% 0/229 0.0% 39756999 NA +3048 chr4 + 190214555 102320194 102320193 102320241 48 TATATATATGTATATATATATGTATATATGTATGAGTATATATATATG chr4 + 94230402 68737222 68737221 68737269 68737222 68737221 68737269 48 TATATACCTGTATATGTACATATATGTATGTATGGGTAAATAAATATG ......:x.......:..:..:...:........:...x...x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 33582972 NA +3984 chr4 + 190214555 102324260 102324259 102324337 78 TGGTGCATGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGCTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.--....:.:.........:.:.........x.xx.x...x.:..............x:xx:.....:.. 9M2D67M 59/76 77.6% 76/94230402 0.0% 2/76 2.6% 26291058 NA +3662 chr4 + 190214555 102338752 102338751 102338855 104 GACGTTGGTCCAGTTACTTAACCTCTCTGTGCCACATTTTTCTTACACATAAAATGAAGATAATAATGG-GACCTTTATCATAGAGTTGGTATGAGTATGAAACA chr4 + 94230402 83501141 83501140 83501245 83501141 83501140 83501245 105 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCA ...x:...x.x.:...........x.x......x..x.....::..x::.......:..x.:...:.::-x....x:x...:..:.x.:x.:....xx.:..x.. 69M1I35M 70/104 67.3% 105/94230402 0.0% 1/104 1.0% 18837611 NA +3473 chr4 + 190214555 102342363 102342362 102342428 66 GTGGCACACGCCTGTAATCCCAGCTACCTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGAGG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::....--....:.:........:..:.........x.xx.x...x::............:. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 26309162 NA +3090 chr4 + 190214555 102350110 102350109 102350152 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 75344114 NA +3169 chr4 + 190214555 102357613 102357612 102357685 73 AAAAAAGAAAAAAAAGATAAAGGAGAGAATGAAAGAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAG chr4 + 94230402 65503048 65503047 65503120 65503048 65503047 65503120 73 AAAAAGGAAGAAAAAGATAAAGTGGATGGGGGAAGAACAAGCATGGGAAAAAGGCAAGAAGGGGCAAGGGGAG .....:...:............x:..x::x.:....:x...x.x..:.::....x.:.:....:x:::..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 36854565 NA +4030 chr4 + 190214555 102357648 102357647 102357872 225 AGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGAGAGAGAGTG--------AGCAGGGAGGAAGGGG------------------------GGGAGAGAGAGAGA-----GAAAG--------AAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAATAAAGAGAGAAA--GAAAGAGAAAGAAAAGAGAGAGAAAGAAAGGGAAGGA-----AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148242 51148241 51148516 51148242 51148241 51148516 275 AGGAGGGAAACAA--AAGGGAGGAGAGGAGGGTGGACGAGATGGAGGAATGAGATGGCTTCTCCCGGCGGGGGCCCACGGGCTCATCCGGCGCCCGCCGTCCGCTGGGAGAGCACGGGGCTGTGGCAAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ....:....:x..--........:::......x..:x.:..x..::..:x....xx.--------:..:...:xxx.x...------------------------.......x:x.:.:-----.x..:--------.x........::..xx.x.......:...:.......:.x...::xxx....x::..:x.::.x.--..::.x..:......:.:..::....:.:..:x..x.-----.:.x.x.........:..x:x.xx:..:... 13M2D42M8I16M24I14M5I5M8I65M2I37M5I31M 145/223 65.0% 275/94230402 0.0% 54/223 24.2% 51209406 NA +3635 chr4 + 190214555 102357683 102357682 102357779 97 GAGGGAGGGGAGAGAGAGAGTGAGCAGGGAGGAAGGGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAA chr4 + 94230402 45777114 45777113 45777210 45777114 45777113 45777210 97 GAGGAAGGGGCGATAGAGAGTGACATGAGAGATGGGAAATCAGGATCAGAAAGACAGAGGAATGGAAAGGGAGATAGAAGGGAAGCAAGAAGTAGAA ....:.....x..x.........xxx.:...:x:..:::xx..::xx...:...x...:::.x:.....:....x...::.:...x.....:x.... 97M 63/97 64.9% 97/94230402 0.0% 0/97 0.0% 56580569 NA +3200 chr4 + 190214555 102357688 102357687 102357738 51 AGGGGAGAGAGAGAGTGAGCAGGGAGGAAGGGGGGGAGAGAGAGAGAGAAA chr4 + 94230402 27261303 27261302 27261353 27261303 27261302 27261353 51 AAGGGAGAGAGGGAATGAGCAGGGATGAGAGGAGGGAGAGAGAATAGAAAA .:.........:..:..........x..::..:..........:x:::... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 75096385 NA +3354 chr4 + 190214555 102357694 102357693 102357825 132 GAGAGAGAGTGAGCAGGGAGGAAGGGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAGAGA--GAGAAATAAAGAGAGAAAGAAAGAGAAAGAAAAGAGAGA chr4 + 94230402 24562526 24562525 24562659 24562526 24562525 24562659 134 GAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATATGAGACTGAAAAGCCAAAACAGAAACAAAACAGATCAAAAGAAAAA ..:.....xx..:xx..x.x.::x...x...............:.:.xx::..:...:..::x..:.::..:.:x.x...xx.x:.x:x....--..:..::x..:.x.....x...:x::.xx......:.:. 93M2I39M 80/132 60.6% 134/94230402 0.0% 2/132 1.5% 77795168 NA +3243 chr4 + 190214555 102357716 102357715 102357837 122 AGGGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAATAAAGAGAGAAAGAAAGAGAAAGAAAAGAGAGAGAAAGAAAGGGA chr4 + 94230402 51148381 51148380 51148502 51148381 51148380 51148502 122 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .::.::.:..xx.x.......:...:.........x...::xxx...:xx::..x.:..x.x::..:.x........x...::..:..:..::..x.:x:xxxx..::x.x:...:...... 122M 72/122 59.0% 122/94230402 0.0% 0/122 0.0% 51209335 NA +3833 chr4 + 190214555 102357730 102357729 102357887 158 AGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAATAAAGAGAGAAAGA-AAGAG--AAAGAAAAGAGAGAGAAAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA chr4 + 94230402 49044653 49044652 49044809 49044653 49044652 49044809 157 AAAGATTAAAGAGAAAAGAATAAGAGAT-TAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAA---AAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAA .:...xx..::.::......x:.....x-x..:.:x:.xx.......x..:x..x....::x.:x...x.......:-.....--.......::...:..:x::...:x...:...---.:...:...x....x.:::..xx:..:xx:.:.:..:..... 28M1D48M1I5M2I31M3D42M 99/154 64.3% 157/94230402 0.0% 7/154 4.5% 53313077 NA +3307 chr4 + 190214555 102357756 102357755 102357878 123 AGAGAGAGAAAGAAAGAAAGAGAAAG-------AGAGAGAGAAATAAAGAGAGAAAGAAAGAGAAAGAAAAGAGAGAGAAAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044660 49044659 49044788 49044660 49044659 49044788 129 AAAGAGA-AAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAA .:.....-......x:.:...xx.:.-------...:...x..:..:x....::x.xx...x..:.:.::::....xx........:::.::::x...::.x.:...:..:...:...x....x.:::.. 7M1D18M7I97M 76/122 62.3% 129/94230402 0.0% 8/122 6.6% 53313096 NA +3176 chr4 + 190214555 102357814 102357813 102357889 76 AGAAAAGAGAGAGAAAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATG chr4 + 94230402 1225212 1225211 1225287 1225212 1225211 1225287 76 AGAAAGAGGACTGAGAGCAAAGGTGGGAAGGCAGAAAAAAAGAAGTGGTTGTGGGAAGGAACAAAAGAAGGAAATG .....:::..xx..:..x..:..x:......x..:..::...:.:x.:xx.x:........x:..:.......... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 101132602 89081953 +3231 chr4 + 190214555 102397547 102397546 102397629 83 CATGGTGGCGCATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAACCAGGGAGTCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...--.x....:.:...........::........x.xx.x...x::...:....x:.:..::xx:..:..:.. 12M2D69M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 26364350 NA +3213 chr4 + 190214555 102403833 102403832 102403910 78 AAATGAAAATAAAAGGAATGTATACTAGAACCACAAAAATTAAGCAACCAAGCAAACAAACAAATAAAATTCTACTAA chr4 + 94230402 57454496 57454495 57454572 57454496 57454495 57454572 77 AAGCAAATATTAAAGCAAAACA-GCGACAACAACAAAAATCAACCAACCAACCAAACAAACAAACAAAAACCCACCAA ..:::..x..x....x..x::.-:.x.x...x........:..x.......x............:....x:.:..:.. 22M1D55M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 44949337 NA +3787 chr4 + 190214555 102408548 102408547 102408712 165 ATATATGTATACATATGTATACA----TATATAAATACATATGTGTATTATATGTATATAAACACATATATGTATATACACATATATAAACACACATATATGTATATATACACATATATAAACACACATATATGTATATATACACATATATAAACACACATATATGTAT chr4 + 94230402 54005610 54005609 54005767 54005610 54005609 54005767 158 ACATGTGTGTAAACATATAGACAACAACATTTAGTTACTTATGTGTGTAATGAATGCAGAATCA-ACAAAT-TATAT---------TGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT .:..:...:..x.:..:..x...----:..x..:x...x.......:.x..:x:.::.x..x..-.:.x..-.....---------.:......:..:...x..........:.:.:.:.x.....x.x..x...x:xxx.:....x.x.xxx...:.::....x.... 23M4I37M1D6M1D5M9D83M 104/154 67.5% 158/94230402 0.0% 15/154 9.7% 48402938 NA +3089 chr4 + 190214555 102408836 102408835 102408995 160 TATAAACACACATATATGTATA-TGTACATGTATAAACACATATATGTATATGTA---CACACATAAGCAC----ATATATGTATATGTACACACATAAGCACATATATATGTATATGTGCATACATAAGCACATATATATGTATATGTGCATACATAAACACATATA chr4 + 94230402 66286683 66286682 66286849 66286683 66286682 66286849 167 TGCAAACATCTTTGTAGGTACAGTGGAAATTTAAAAGTTCATAT-TGTAGAGGTGTAGCAGAAATCAGAATCAGAAAAAATTTACTTTCACCAACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTA .::.....:x:x.:..x...:.-..x.x..x..x..::x.....-....x.x..:---..x.x..x..x.:----.x.x..x..:x.x:..xx...::x.::x..:...:..x.:..x..x...:..:........:..:..:....x....:..x.:x:..::.:.. 22M1I21M1D10M3I13M4I93M 100/159 62.9% 167/94230402 0.0% 9/159 5.7% 36122153 NA +3297 chr4 + 190214555 102408891 102408890 102408981 91 ACACATAAGCACATATATGTATATGTACACACATAAGCACATATATATGTATATGTGCATACATAAGCACATATATATGTATATGTGCATA chr4 + 94230402 66286775 66286774 66286865 66286775 66286774 66286865 91 ACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTTA ....:.:x.x.::...:..x.:..x.:x.:.:..:........:..:..:....x....:..x.:x...::.:..:.:xx:.:.:...x.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 36122116 NA +4328 chr4 + 190214555 102409044 102409043 102409251 208 CACATATATGTA--TATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATA-TGTGCATACATAAACACATATATGTATATGTGCATACATA-----AACACATATATATGTATATGTGCATA---------TATAAACACATATCTGTATATGTACGCATGTATGTATGTGCATATACACATATATGTATGTATGTGCATATA chr4 + 94230402 70919908 70919907 70920130 70919908 70919907 70920130 223 CATATAAATGTAATTTCTTGCAGAATAAAGCAC-TATCTGC-TACCTGAATGCATGTGCACATATATGGAAAATAAATAAAAATAAATCAGTATATTTTTAAGAGCATAAATATTGCAAAAATTAATCTATGCACGTGTGTACAAAACTCTGACATCCACAAATACCTGTATGTATACGTAGATATGTATGTGTACATACACTGAAACTCGTTCATTTGCAGATA ..:...x.....--.x:x....x.xxx..:...-...x..:-..:x..x..:...:x:..........x.x.-.:x::.x.x.....:xx:.....x.x..x.x.....x...-----..x.:xx..x....:.::....:.:.---------:..xx...x...:......:.:....:.x:..........:.:......xx.x.:x::.x:..x....x... 12M2I19M1D7M1D30M1I40M5I26M9I72M 137/206 66.5% 223/94230402 0.0% 19/206 9.2% 31489136 NA +3062 chr4 + 190214555 102409103 102409102 102409185 83 ATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATATGTATATGTGCATATATAAA chr4 + 94230402 6083150 6083149 6083227 6083150 6083149 6083227 78 ATATATGCTTCTCCCTATATATGG-----TGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAA .......:x.x.x:x:...:..::-----.:.:...:.:..:.......:.....:........:...x:x.:...:..x... 24M5D54M 54/78 69.2% 78/94230402 0.0% 5/78 6.4% 96325953 93888602 +3050 chr4 + 190214555 102409385 102409384 102409459 75 ATATGTGTATGTATGTGCATATACACATATGTGTATGTATGTGCATATACACATATGTGTATGTATGTGCATATA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ..:...::..:.....xx:x:..::::x..........x......:.......:.:x.:....x.x:::....:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 12660735 NA +3061 chr4 + 190214555 102409411 102409410 102409485 75 ATATGTGTATGTATGTGCATATACACATATGTGTATGTATGTGCATATACACATATATGTATGTATGTGCATATA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ..:...::..:.....xx:x:..::::x..........x......:.......:.:x.:....x.x:::....:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 12660761 NA +3705 chr4 + 190214555 102409509 102409508 102409652 144 ATATACACATATATGTGTGTTTATGTGCATATACACATATATGTGTGTTTATGTGCATATACACATATATGTGTGTTTATGTGCATATACACATATATGTATGTATGTGCATATACACATATATGTATGTATGTGCATATACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTG--------------GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATG--------------TGTATGAATATGCATGCACAC ..x.:.x:...:........:.x....--------------x.:..:.....:..:.:x:...:...:x:....:::...::.:..:...x...::x.x.:.....:..--------------......x..:.....::.... 27M14D68M14D21M 79/116 68.1% 116/94230402 0.0% 28/116 24.1% 81300322 NA +3974 chr4 + 190214555 102409565 102409564 102409705 141 ATATACACATATATGTGTGTTTATGTGCATATACACATATATGTATGTATGTGCATATACACATATATGTATGTA--TGTGCATATACACATATATGTATGTATGTGCATATACACATATATGTGTGTTTATGTGCATATACA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG-AGATTACAGTTTCTGTGGGTGTACA ..x.:.x:...:........:.x....x:::..:x:....:.::x:::..:.:.x::.::..x....:.......--::...x.x.::::....:......x..:.....::....:-.x..xxxx....x....x:.:.... 75M2I40M1D25M 87/140 62.1% 142/94230402 0.0% 3/140 2.1% 81300378 NA +3705 chr4 + 190214555 102409671 102409670 102409814 144 ATATACACATATATGTGTGTTTATGTGCATATACACATATATGTGTGTTTATGTGCATATACACATATATGTGTGTTTATGTGCATATACACATATATGTATGTATGTGCATATACACATATATGTATGTATGTGCATATACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTG--------------GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATG--------------TGTATGAATATGCATGCACAC ..x.:.x:...:........:.x....--------------x.:..:.....:..:.:x:...:...:x:....:::...::.:..:...x...::x.x.:.....:..--------------......x..:.....::.... 27M14D68M14D21M 79/116 68.1% 116/94230402 0.0% 28/116 24.1% 81300484 NA +3843 chr4 + 190214555 102409727 102409726 102409840 114 ATATACACATATATGTGTGTTTATGTGCATATACACATATATGTATGTATGTGCATATACACATATATGTATGTA--TGTGCATATACACATATATGTATGTATGTGCATATACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x.:.x:...:........:.x....x:::..:x:....:.::x:::..:.:.x::.::..x....:.......--::...x.x.::::....:......x..:.....::.... 75M2I39M 71/114 62.3% 116/94230402 0.0% 2/114 1.8% 81300540 NA +3171 chr4 + 190214555 102419683 102419682 102419764 82 GTGGTGGCACATACCTGTAATCACAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----:..x....:.:x......:...::........x.xx.x...x...........:.:..x:xx:..:..:.. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 26386482 NA +3123 chr4 + 190214555 102448761 102448760 102448833 73 TGCTCCCGTGGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGGATCACTGGAGCCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x:..:..:.........::.:........x:xx.x.:.x....x..:........x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 26415556 NA +3130 chr4 + 190214555 102464252 102464251 102464305 54 CACATGTATATACATACGTGTATATATATATATATACACACACACACACACACA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..::...:...:..:..:::.x...:x.:....:........:........... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 79216531 NA +3118 chr4 + 190214555 102512325 102512324 102512366 42 TCTGTATGTGTGTTGTTTTGTTTTGTTTTGTTTGTTTGTTTT chr4 + 94230402 69227472 69227471 69227513 69227472 69227471 69227513 42 TTTATGTGTGGGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTT .:.:.:....x...x........................... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 33284853 NA +3057 chr4 + 190214555 102517427 102517426 102517501 75 AATTGCAGTGCTTCTTAAAATTAATACAGTATTACTTAAAAAACAAAAACAAAAAAACCAGTGTTTTCCAATTTG chr4 + 94230402 28698751 28698750 28698825 28698751 28698750 28698825 75 AATTACCATACTTCTTCATAGTAGCACTGTTTTACTCTAAAAACAAAAACAAAAGAGTTTGTGCTGTGAATTTTG ....:.x:.:......x.x.x..::..x..x.....:x................:.:::x...:.x.xx.x.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 73818676 NA +3326 chr4 + 190214555 102526907 102526906 102526977 71 TCTTTGCTCTCTTTTTCGTGTGTGTGTGTGTGTGTATATATGTATATATGTATATGTATATACATAATCAT chr4 + 94230402 85834529 85834528 85834599 85834529 85834528 85834599 71 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .:...::..x:..x.x:x...................xx.....x::..::.......x......:x.:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 16692378 NA +3115 chr4 + 190214555 102526928 102526927 102526970 43 GTGTGTGTGTGTGTATATATGTATATATGTATATGTATATACA chr4 + 94230402 24295791 24295790 24295833 24295791 24295790 24295833 43 GTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACA ...........................xx..x...:...:... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 78231137 NA +3182 chr4 + 190214555 102533829 102533828 102533890 62 TTGTTTTTGTTTTTAGCAGATGGCCCATACCTTCAAATATTAGAGCAACCTAAACAGGTAAG chr4 + 94230402 62638423 62638422 62638484 62638423 62638422 62638484 62 TTTTCTTTTATGTTAGCAGATGGACCGTATCTTCAAATCATTGAACAGCCAAAACAGGTGAG ..x.:...xx.x...........x..:..:........xx.x..:..:..x........:.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 39895406 NA +3260 chr4 + 190214555 102535864 102535863 102535962 99 GAATTGTGTGTGTGTGGTTTTGGGGTTTTTTTTGTTTTTTTTTTTTAAGTTAGAAAAAGATTCTTTTTTCTTTGGGACCTCTTAGCCACAGATTTTCCC chr4 + 94230402 9012129 9012128 9012222 9012129 9012128 9012222 94 GAACTAGCTGCGTGTGTTTTTTGGTTTTTTTTTGTTTTTTTTTTTTACATTGGC-----ACTCTTACTTCATTATGGCACCGTAGTGCCAAAATGCCCC ...:.:xx..:.....x....x..x......................x:..:.x-----.:....x:...x..:x.:.x:.x...:xx..:.x.x:... 54M5D40M 65/94 69.1% 94/94230402 0.0% 5/94 5.3% 93523735 NA +7761 chr4 + 190214555 102537845 102537844 102537961 117 TTCACCTTTGCAGAGAGGATTTCGTTTCCGTTATGTATGTGAAGGCCCATCCCATGGTGGACTACCTGGTGCCTCTAGTGAAAAGAACAAGAAGTCTTACCCTCAGGTCAAAGTAAG chr4 + 94230402 62640084 62640083 62640200 62640084 62640083 62640200 117 TTTATTTCCACAGAGGGGTTTTCGATTCCGATACGTATGCGAAGGGCCTTCACATGGTGGACTTCCTGGTGCTTCTAGTGAAAAGAACAAAAAGTCATACCCCCAAGTCAAAGTAAG ..:.::.:::.....:..x.....x.....x..:.....:.....x..x..x...........x........:.................:.....x.....:..:........... 117M 96/117 82.1% 117/94230402 0.0% 0/117 0.0% 39897761 NA +3222 chr4 + 190214555 102539228 102539227 102539276 49 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAATCAGTCTTTGG chr4 + 94230402 26392948 26392947 26392996 26392948 26392947 26392996 49 CTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACATTTTGG ....x.......................:.x..x.......xx:..... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 76146280 NA +3084 chr4 + 190214555 102561265 102561264 102561297 33 CTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 + 94230402 17835961 17835960 17835993 17835961 17835960 17835993 33 CTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 84725304 NA +9417 chr4 + 190214555 102566982 102566981 102567141 160 TATAGATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGGAAAAAATATCCACCTGCATGCCCACAGCCTGGTGGGAAAACACTGTGAGGATGGGATCTGCACTGTAACTGCTGGACCCAAGGACATGGTGGTCGGGTAAGT chr4 + 94230402 62647515 62647514 62647674 62647515 62647514 62647674 160 TACAGATTTGCAACTATGTTGGACCTGCAAAAGTAATCGTCCAGTTAGTTACTAATGGGAAATACGTCCACTTACATGCTCACAGCTTGGTGGGTAAATTTTGTGAAGACGGAGTATGCACAGTCAACGCAGGACCTAAAGACATGGTTGTTGGGTAAGT ..:....:...........x.....x.....:..x..:..:.....:..:..x.....:...x.::.....:.:.....:......:.......x...:x:.....:..:..::.x.....x..x.x:..x.....:..:........x..:........ 160M 123/160 76.9% 160/94230402 0.0% 0/160 0.0% 39919467 NA +9463 chr4 + 190214555 102576868 102576867 102577042 175 TTCTCCAGCTTCGCAAACCTGGGTATACTTCATGTGACAAAGAAAAAAGTATTTGAAACACTGGAAGCACGAATGACAGAGGCGTGTATAAGGGGCTATAATCCTGGACTCTTGGTGCACCCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGACCGGCAGCTGGGAGGTA chr4 + 94230402 62648823 62648822 62648997 62648823 62648822 62648997 175 TTCGGCAGGTTTGCAAACCTTGGAATACTTCACGTCACAAAGAAGAAAGTGTTTGAAACTCTGGAAACACGCATGATCGATGCTTGCAAAAAAGGATACAACCCAGGACTCTTGGTGCATCCTGAACTTGGCTATCTGCAGGCTGAAGGATGTGGAGACAGACAGCTAACTGGTA ...xx...x..:........x..x........:..x........:.....:........x......:....x....:x..x..x..:.x..::..x..:..:..x..............:.....x....x....:....:..x.....xx.x..:...x.:.....::xx.... 175M 134/175 76.6% 175/94230402 0.0% 0/175 0.0% 39928045 NA +9883 chr4 + 190214555 102578831 102578830 102579071 241 AAATGTTCACACTTCCC-----TGGGCATGAATGGACTGTGCTG---TAT-GGCCCTAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTACAGCTTTTCTTCCGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGACGCCATCTATGACAGTAGTGAGTAC--------TTCAC-----TTCCAACAGGGGGCACACC chr4 + 94230402 62649720 62649719 62649981 62649720 62649719 62649981 262 AAATGCTCATTCTCCCCCACCTTGTGC-TAATTAATCTGTGCTAATTTATTGGTTCCAGAACGAGAAAGAGAAATTATTCGCCAGGCAGCAGTACAGCAGACAAAAGAAATGGATCTCAGTGTGGTGCGTCTTATGTTTACTGCCTTTCTTCCTGACAGTAACGGTGGTTTCACACGGAGGCTTGATCCTGTTATATCGGATGCAATATATGACAGCAGTAAGTATATCTGGCATTCATTACTGTTTCAAAATGGGGCACATC .....:...:x..:...-----..x..-.:.x.::x.......:---...-..::.:...x..:....:...:x.x..:.....:.....xx.:........x..:..:.....:.....:........x..:........x..:........x..:..:.x:..::.:......x..x.x..x..x..:..x:....:..:..x..x........:...:....:--------....:-----..:...x.x........:. 17M5I5M1D16M3I3M1I175M8I5M5I19M 178/240 74.2% 262/94230402 0.0% 23/240 9.6% 39929111 NA +9257 chr4 + 190214555 102580508 102580507 102580645 138 TATTTGTTGTTT------TTCCCCTGTGAACAGAAGCCCCCAATGCATCCAACTTGAAAATTGTAAGAATGGACAGGACAGCTGGATGTGTGACTGGAGGGGAGGAAATTTATCTTCTTTGTGACAAAGTTCAGAAAGGTAAAT chr4 + 94230402 62651803 62651802 62651946 62651803 62651802 62651946 144 TAATTGTTTTTTAAAATCTTCTCCTTTCAATAGAAGCGCCCAATGCCTCCAACTTAAAAATTGTAAGAATGGACAGGACAGCGGGGTGCGTAACAGGAGGGGAAGAGATTTACCTTCTCTGTGACAAGGTTCAGAAAGGTAAGT ..x.....x...------...:...x.x..:......x........x........:..........................x..:..:..:..x........:..:.....:.....:........:..............:. 12M6I126M 118/138 85.5% 144/94230402 0.0% 6/138 4.3% 39928705 NA +3178 chr4 + 190214555 102581530 102581529 102581596 67 TGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGAGGATTGCTTGAACCCAGGAGTTTGAGGCTGTAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.....xx:...::........x:xx.x.:.x::...........:..:..x:........ 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 26548319 NA +7874 chr4 + 190214555 102582853 102582852 102583024 172 TGATTGTTTGCAGATGACATCCAGATTCGATTTTATGAAGAGGAAGAAAATGGTGGAGTCTGGGAAGGATTTGGAGATTTTTCCCCCACAGATGTTCATAGACAAGTAAGTGATTTATTATTATTATTAATCCTTATTATTTTT----------AGAGATGGGATCTCACTCTGACACCCAG chr4 + 94230402 62653725 62653724 62653901 62653725 62653724 62653901 177 TGACTCTCTGCAGATGATATTCAAATACGTTTCTATGAAGAGGATGAGAATGGTGGTATGTGGGAAGGCTTTGGAGACTTTTCTCCTACAGATGTACATAGACAAGTAAGTAATGGAGCAT--TTGCTATTTGTTAACATTTTTCTGATCTCAGGAAAATGGGATCATATT---ACAACCAG ...:.x.:.........:..:..:..x..x..:...........x..:........x:.x........x........:.....:..:........x...............:..xx.x:..--..::..x.:x...x:......----------::.:........x:.:.---...x.... 121M2D21M10I17M3D8M 129/167 77.2% 177/94230402 0.0% 15/167 9.0% 39929128 NA +9971 chr4 + 190214555 102584636 102584635 102584830 195 AAAAAATGTAGTCCTACACCAACATGTGGTTCTTCGTA---TCCT--GCAGTTTGCCATTGTCTTCAAAACTCCAAAGTATAAAGATATTAATATTACAAAACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATCTGACTTGGAAACTAGTGAACCAAAACCTTTCCTCTACTATCCTGAAATCAAAGGTAAGTCAGT chr4 + 94230402 62654344 62654343 62654541 62654344 62654343 62654541 198 AAAAAACATGGTCTGTGAC--AGATGTGCTTTATCGTTGATTCCTTCACAGTTTGCTATTGTGTTCAAAACGCCCAAGTATCGAGATGTCAACATCACAAAGCCAGCATCTGTATTTGTACAACTACGTCGGAAATCTGATCTAGAAACGAGTGAACCAAAGCCTTTTCTCTACTATCCAGAAATCAAAGGTAATTTGGT ......::.:...:xxx..--.x.....x..:x....x---....--:........:.....x........x..x......x:....:.:..:..:.....:.....x.....:.....x..:..x..xx..........::.:.....x...........:.....:...........x..............x.::.. 19M2D17M3I4M2I153M 152/193 78.8% 198/94230402 0.0% 7/193 3.6% 39930292 NA +7568 chr4 + 190214555 102593390 102593389 102593562 173 CTTTTCTCCTCTGGTTTCTCTTCCTTTAAATACAGATAAAGAAGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGGATAGTTTCGGCGGTGGTAGTGGTGCTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCGGTGGAGGAGGGGGCACTGGAAGTACAG chr4 + 94230402 62657102 62657101 62657268 62657102 62657101 62657268 167 CTTATCCTGTCTGTTCCTTCTCACCTGACACACAGATAAAGAAGAAGTGCAGAGGAAGAGGCAGAAGCTCATGCCAAACTTCTCCGATGGCTACGGTGGAGGCAGCGGC------GCAGGCGGCGGTGGCATGTTTGGAGGAGGAGGCGGCGGTGCTGGCTCTGGTAAGACAG ...x..::x....x.:::...:x.:.x.x.:..........................:x.x..............x..:..:..x...:.:.x...:..x..:..:..:------..x..x.....x...........x:.x..x..:..x..x.xx...x....x.:x.... 109M6D58M 122/167 73.1% 167/94230402 0.0% 6/167 3.6% 39936288 NA +10270 chr4 + 190214555 102597510 102597509 102597674 165 TGCCTTACAGATAACCTCTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGGTAAGTCAGAACT chr4 + 94230402 62662114 62662113 62662278 62662114 62662113 62662278 165 TGTGTTGCAGATGGTCTGTTCCTGGAGAAGGCTATGCAGCTTGCCAAGCGTCACTGCAACGCTCTCTTTGATTATGCTGTAACTGGAGATGTGAGGATGCTGCTAGCTGTTCAGCGCCATCTCACTGCTGTCCAGGATGACAATGGAGACAAGTAAGTCAGTGCT ..:x..:.....:::..x..:..:....................x...x.x..:xx...:..:..:..:..:..:..x..:..x.....:....:.........:..:..:....................x........x.....:....:.........x:.. 165M 130/165 78.8% 165/94230402 0.0% 0/165 0.0% 39935396 NA +6516 chr4 + 190214555 102600878 102600877 102601015 138 CTGTGTTTTCATTCCAGTGTCTTACACTTAGCAATCATCCACCTTCATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACATGAGAAATGATCTGTACCAGGTAAGC chr4 + 94230402 62665150 62665149 62665287 62665150 62665149 62665287 138 CTGTTGTTTTGTTTCAGTGTCCTTCATTTGTCAATTATCCACCTTCATAGAGAACTGGTTAAAAACCTCTTGGAAGTGATGCCAGATATGAATTATAACAACATTATCAACATGAGAAATGACCTTTACCAGGTATGC ....xx...::..:.......:.x..:..:x....:............xxxx....x..x.:::.:..x:.:.....x.:::.x.:.x...x..x.:.::......................:..x.........x.. 138M 99/138 71.7% 138/94230402 0.0% 0/138 0.0% 39935728 NA +10727 chr4 + 190214555 102606482 102606481 102606703 222 CTTTCACTTTCCAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAAAGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACTACTTCTTGACCACCCCAACGGGGACGGTAAGA chr4 + 94230402 62667246 62667245 62667466 62667246 62667245 62667466 221 CTGTCACTT-CCAGACCCCGCTGCACCTGGCAGTAATCACAAAGCAGGCAGAGGTGGTAGAAGACCTGCTGAAGGCTGGAGCAAATGTCAACCTTTTGGATCGCCATGGTAATTCTGTCTTGCACTTAGCTGCTGCTGAAGGAGATGACAAGATTCTGAGTCTGCTCCTCAAGCATCAGAAGGCATCTTCAATGATCGACCTTTCCAATGGTGAAGGTAGGA ..x......-......x..x:.....:.......:.....x.......x...x.....:..:..::......:......:..x:.:x.x.:....:....:...:xx.....:.....:......:.......::xx......x....:..::....x...x.x:.x........:x.:......x.x::.x.xx.:....x::....:..x..x....:.. 9M1D212M 161/221 72.9% 221/94230402 0.0% 1/221 0.5% 39939236 NA +9402 chr4 + 190214555 102607147 102607146 102607346 200 TAGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTGGTGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGTGAAGGGCACACTTATTTGCTTTTGC chr4 + 94230402 62668468 62668467 62668667 62668468 62668467 62668667 200 TAGGTCTCAGTGCAATTCACATGGTGGTGACCGCCAATAGCTTGTCCTGTCTGAAACTACTGATTGCTGCTGGAGTTGATGTCAATGCTCAGGAACAAAAATCTGGACGAACGGCATTGCATTTAGCTGTTGAACAAGAGAACGTCCCCTTGGCAGGCTGCCTTTTGCTTGAGGTGAGGGCAGAATTTCTTTTTCCCTGC .......x.:...x.....:x.:.:x:...:x:x.......:..:.x...:..xx:..:...:.x..:.....:.:...:..............:..:..:..:..:..x..:...:....::.:.....x..:..x..x...:..:.x..............x:.x..x.......:..xx:x.:..x...x::::... 200M 139/200 69.5% 200/94230402 0.0% 0/200 0.0% 39938679 NA +7161 chr4 + 190214555 102607646 102607645 102607754 109 TAGGGTGATGCCCATGTGGACAGTACTACCTACGATGGAACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCAGCAGGTA chr4 + 94230402 62669483 62669482 62669591 62669483 62669482 62669591 109 TAGGGTGATGCAGATGTGGACAGCACTACATACGATGGCACAACGCCTCTTCACATAGCAGCTGGAAGGGGCTTCACAAAACTGGCAGCAGTTCTCAAAGCAGCAGGTA ...........xx..........:.....x........x..x..:..:..x..:...........:..:..x.:...x.::........xx.................. 109M 90/109 82.6% 109/94230402 0.0% 0/109 0.0% 39938163 NA +3208 chr4 + 190214555 102609589 102609588 102609638 50 GCAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGCGT chr4 + 94230402 88382708 88382707 88382757 88382708 88382707 88382757 50 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCAT ....x:.........xx.x.........::.:................:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 14226881 NA +6437 chr4 + 190214555 102610557 102610556 102610707 151 TGTAATCTAACTTCGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTGAGTGC chr4 + 94230402 62670450 62670449 62670600 62670450 62670449 62670600 151 TGCACACTTATTTTCCAGGCGCAGATCCTCACGTTGAGAACTTTGAGCCGCTCTTTGATGTAGAAGAAGATGTGAAAGATGATGATGATGATGAAGGAATCGTACCGGGAACAACACCACTGGATATGGCAGCCAACTGGGAGGTTCGTGC ..:.xx..x.:..:x....x........:.xx..x..............x....x...:x.:..x..xxx.xx.:..:...xx.:x..x.........:.:..:..x.....x..:..x..:........x:...:....x....xx.... 151M 107/151 70.9% 151/94230402 0.0% 0/151 0.0% 39940107 NA +9431 chr4 + 190214555 102612403 102612402 102612612 210 AACAAGTGTGTTCCTTCTTCATTTCCTTCAGGAGACATGAAACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTGATCCAGACAAAAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAACTATGAGGTAACA chr4 + 94230402 62671835 62671834 62672039 62671835 62671834 62672039 205 AACAGATGTATT---TTTCCATTCCC--CAGGCCCTCTGAGAGAGCTGAATGAAAGCTCCAAGCAGCAGCTTTACAAGCTATTGGAAACGCCTGATCCAAGCAAGAACTGGTCTACTCTAGCAGAAAAGCTGGGTCTTGGCATTCTTAATAATGCCTTCAGGTTGAGCCCTTCACCCTCAAAAACTCTGCTGGATAACTATAAGGTAATA ....::...:..---.:.:....:..--....xxx:x...:.x.....:x....:::x:x....x......x..:...:..:.:....:x.........::...:......x.......:..:x.:..::.:.....x..x..x...............x..:....:...x.x..:..x.....x..xx....:......:......:. 12M3D11M2D182M 149/205 72.7% 205/94230402 0.0% 5/205 2.4% 39940568 NA +5991 chr4 + 190214555 102616434 102616433 102617279 846 ACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTACC------GAGTCTCTGACCAGTGGTGCCTCACTGCTAACTCTCAACAAAATGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCA-----AAATTTAGCCTGCTGA---CAATTTCCCACACC-----------GTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA---AGACAGAAGCTGAAGTGCATCCAAAGGTGC-TCAGAGAGCCGGCCC----GCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTG------GTTCATAAATGAATTTTAGTTTGG---------TTCACTT--ACAGATAGTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAGCTGCTGCTGGATCACAGCTGCTTTCTGTTGTCATTGCTGTTGTCCCTCTGCTACGTT-------------CCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAATTAAGGGTTAAGAAAAGAGATATTTTAAAATGAGAGTCACTTGATGTGCCATTTTAAAAAAAAAGGCATATTGCTTTTTCTAATGTGGTTATTTCTCTGATTTGCAAAAAAA----AAAAAAAAAAA---AATACTTGTCAA------TATTTAAACATGGTTACAATCATTGC--TGAAAATGGTATTTTCCCCCTTTTCTGCATTTTGCTATTGTAAATATGTTTTTTAGATCAAATACTTTAAAGGAAAAAATGTTGGATTTATAAATGCTATTTTTTATTTTACTTTTATAATAAAA chr4 + 94230402 62673103 62673102 62673935 62673103 62673102 62673935 833 ACAAATTTCAAGACCCTGAAAGCACATGTGACAGCGGCGTAGAGACCTCCTTCCGCAAACTGAGCTTTACTTATTCAGACTCTCTGAACAGCAAG---TCATCCATAACGCTTAGCAAGATGACCCTGGGCTACGGCCAGGAAAGCTCAGTGCAAAGCAGTTATATACCTAACTAGGTAACTTCAATTAGCAATATATGCAGTTACAGGAACAACCCTGACATTTAGAATTACTTTGGTATTGTCACAGCTGGAGGGAAGTAAATTCACAACCAGAAATGCATTGGAGGAACCACACACAAACCTGAACCAGT-------------GGCAACTCCTCAACCTCACTTCCTTACTCAAGTACTGTTCATTTGTAAGCCTCGACTGAGAACCAGGGCTCCACATGAATACAAAGGA-CTGGACACTGCAGGACTGACGGAGC----TCACCTG-----------GTTTGTGAGGATTTTCT-----TTTATAGATGAAAGTCACTCCTTGTTAGTGTG--TAATATCAGCTCACTTAATTCAAAGAGGTAAAGCACACAGCAATCAAAGG----ATGGTTTCTGGCTGT--TCCCTTCAGA---------AGTTTTGCAGT-------ACGGTTGTCTGGAAAAAGCTCCTAAAA------TCGCTGG-------------CAAAGAAAAACA-GTGACTTTAACTGCAACAGTGACAACTCTGGAAGACAAAAGAATCCTAAAAAAAAGAATCTTGTATATTTCAAATAATGTATTTAAACATATCTTTGGTGACTCTTATGAAAAAAAAAT------CAAGTTTTGCATTTCCTACTTGTAAATA-GTTTTTTATATCAATTCCTTTTA---AAAAAATGTGTGCTTTTTAAAAGCttatttttattttacttttataataaaa ..:.::.:.:....xx...x..:::x..:...........:.....x..............x........:------..x.......x...:::x---...::xx....x..:.:...:...x...xx.::..:..x......:.x:.xx.:x..:...-----.x.::..:.:x.x.:.---.....xx.x.:.:x-----------.x::..x..x:.xx::..:....x.x:..xxx.xx:....---:..x:....:x:.xx::..x...:.::...-.::...::x.x:.x.----:......:..x.-------------.:x.x..::.....:.x:.......x..::------......xx:.:.:::.::::.x:.---------.:...x.--.:.x.x..x.-..:.xx.:::..:x....:.x....----x..:...-----------.:..::x.:.x...x.:-----:.xx.:...x.x..:::..:::....:x::.x--.:x.:..xx::::..xx:..-------------.x:.:x.:x..:.....----.:...:x.::x...x--.:.....x..---------x:.......x.-------.x....:xxx::.:.:.xx.::.....------..:..x.-------------x...:...::..-:.x:....xx..:xx:::..x.:xx.....:xxx:.....:..----........:..---x:..:x.x....------...........:x:.x:::.x.:.x:--......x::x..------.xxx..:.......:x:xx.........-........x.....x.x....x.---.........xx.x...x....x...xx......................... 71M6I18M3D61M5I16M3I14M11I40M3I30M1I15M4I12M13D30M6I24M9I7M2I10M1D25M4D7M11D17M5D32M2D20M13I17M4D15M2D10M9D11M7D27M6D7M13D12M1D43M4I11M3I12M6I26M2I12M6D28M1D23M3D52M 471/755 62.4% 833/94230402 0.0% 169/755 22.4% 39943331 NA +3369 chr4 + 190214555 102625256 102625255 102625376 121 CTCTCCTTTTCTCATT--GTCTTCCTTTCTCTCCCTTCTACTTTTCTCTCTCCCCTCCGCTTTCTCTTTCTCTCTTTTCTCTCTCTCTTCCTTTCTCTTTCTCTCTCACCATTTCTTTCCTTT chr4 + 94230402 80503275 80503274 80503392 80503275 80503274 80503392 118 CTCTCCCTTTCCCATTTAACTTCCTTTTCTCAGATTCCAATTTTTCTTTATTTTCTGCAGTTTTTCTTTGAAG--TTTCTCTTTCTCCTGCCTTCTTTTATTCCCCAGCC---TCTTTTCTTT ......:....:....--:::.:.:......xxx:.:.x.:......:.x.:::..x.:x...:.....xxxx--.......:....:.x.:....:..x:..:.:x:..---.....:.... 16M2I55M2D35M3D10M 77/116 66.4% 118/94230402 0.0% 7/116 6.0% 22121981 NA +3064 chr4 + 190214555 102625373 102625372 102625432 60 CTTTTCTCTCTCATTCTTCTTCTCTCCCTTCCTTTTTCCTTTCTCTTTCTCTCCTAGTCT chr4 + 94230402 89601113 89601112 89601164 89601113 89601112 89601164 52 CCTTTCTCTCT--------TTCTCTCCTTTCCCTTTTCTTTACTCTTTCTCCCCCAACCT .:.........--------........:....:.....:..x.........:..:.::.. 11M8D41M 43/52 82.7% 52/94230402 0.0% 8/52 15.4% 13024260 NA +10155 chr4 + 190214555 102632057 102632056 102632309 253 TCAGTAAATATCTGTTAAGGAGGTCACATGAAAAGATTGCTCCAACTCATTCTTGCTGGTGGGCTCCCAAGGGTAAAATAATATAGTTCGTGTCTTCTCAGTCATGAGGAAACCATTGTCACTAAATCTCCCTGGGATGCTTCCTACATCCAACCAAACAAAGGGAGCGACAGCTGAGGTCTCCAGGTCAAAAACAAATATGTCACCTTGCTGAGAGATGATGGCCTGAAAAAGAAAAAAAAAAATGAATGAA chr4 + 94230402 62681722 62681721 62681974 62681722 62681721 62681974 253 TCAGGTAACGTCCATCAAAGATGTCAAGGTAAATGACTTTTCTAGTTCTTCAACACTGGTAGGCTCCCAAGGATAAAAAATAACCACTTTCCTCTTTTCCATCATGAGGAAACCATTATCACTAAACCTGCCCTTTATACTCCCTACATCCAGCGTAACAAAAGGAGCAATAGCAGTAGTCTGAAGATCAAACAGATAAACATCATCTTGTTGGGATACAGTGGCCTGGAAGaaaaaaataaataaaaataaa ....xx..::..::.:..:..x....x:xx...x..:.x:..:.::..x.:xx::.....:...........:.....x.xx.:x::.:x:x....:..x:................:........:..x..:xxx..:..:..........:.xx......:.....:.:...x.x:....xx..:.....x.x.x.x.::...:....:..:..x.:::.......:..:.:.....x...x.x:...:.. 253M 169/253 66.8% 253/94230402 0.0% 0/253 0.0% 39950335 NA +9276 chr4 + 190214555 102634782 102634781 102635048 267 GCTTACAGTGATCTGCGCCTTGCAGAGCCCCACGGCCTCCTTCGGTGAGGACAAGAAGTGGTAGTTGGTCGGGCTCAGGAGTTCATGGTCAGCTGAAAGGTAAAAGGAAACCACACAGCTTTCCCGTGTGCAATTCCCACATCTCCTCAGCAATTCAGACACTGGCTCCTCATAAAGGCAGACAGCCTCTCCTCCTTTCATCACAAAACGTTCAGTCACACGAGAGCACACGGGCTCCAGGGAGCTCCATGTATGGACTCTCACCTG chr4 + 94230402 62684127 62684126 62684393 62684127 62684126 62684393 267 GCTTACACTAAGTTGCGTCTTTTCCAATCCTACAGCATCCTTCAGGGATGAAAGGAAATGATGATTCATGGGACTCTGGAGTCCATCTTCACCCACAAGGTAAAAAGAAACAACACAGCTTTTCCTGGTACAATTTCTGCATCTTTCCAGCAAGGCATTTATGGACTCCTTGTAGATGGAAAAAGCACTTTGTGCTTTAACAGTCACACCATCTTTGACAAGAGTGCATACTGGCTCCAGAGAACTCCAGGAGTTCACAATGACCTG .......x.:.x:....:...x:xx.::..:..:..x......:.x..x..x.:...:..:.::..x:.x..:...x.....:...xx...x.::x.........:.....x..........:..xx..:.....:.::.....:::......xx..xx:.:x.:.....::..:.x.x.:.x...x::.:x.x....x.:x::x.x..xx..xx.x...x...x...:..x........:..:.....x.x:.xx..xx.x..... 267M 173/267 64.8% 267/94230402 0.0% 0/267 0.0% 39950655 NA +7949 chr4 + 190214555 102635856 102635855 102636014 159 GTAACTTACACTGAGTGTCATCGAATAATCCGAGTGAAGATCTGACACACCATAGATATAGAACGTGTTTTCATTCTCAAAGCCTACTGGCAACAGTGGAGCAAAGAAATTCTGAGCAAAGTAATGAAGCATTTTCCACTTTCCTCCGTACTCTGAAAA chr4 + 94230402 62685424 62685423 62685582 62685424 62685423 62685582 159 GTCACTTACCTTCAAAGTCAGCTTGTGGTCTGTATGAAAATCTGAGACACCATAAATGTACAACACACCATTATCTTCATAGGCCACAGGCAGCAGTGGGGCAAAGAAGTTTTGGGCAAAATAATGGAGCAGTTTCCACTTTCCACCATACTCTGGGAA ..x......x:.x.:x....x.xx:.::..:.x:....:......x........:..:..x...:::::x.:..::...x..x.:..x....:......:........:..:..:.....:.....:....x............x..:.......::.. 159M 114/159 71.7% 159/94230402 0.0% 0/159 0.0% 39950432 NA +8917 chr4 + 190214555 102639694 102639693 102639859 166 AGAACGCTGAAATGCTTACCAAGAGAAGCCCAGGAAGGAGCTTGCCAGATGTCATTCAACTGCCAATAAAGTGCCCCCATCGTGTGCCCTTGCTGATCCACTATCTCGCTGCGACTACGGCGGTAGAATTCAGTTTCTGTTTTGACACACTGGGCCTGCATCACCT chr4 + 94230402 62691184 62691183 62691349 62691184 62691183 62691349 166 AGACTGTTGCAAAACTTACCCAAGGAAGACCACGAAGGTGCCTGCCAGATGTCATTGAGTTGCCAATACAGAGCACCCATTGTGTGTCCTTCTCCCCTGATTATTTCACTTCGACTAGAACGATAGAATTCGGTTTCTGTTTTTACGCATTGAGCCTGCATCACCT ...x:.:..x..x:......x.::....x...x.....x..:..............x.::........x..x..x.....:.....:....x::xx::x.:...:..:..x......x::..:........:...........x..:..:..:............. 166M 124/166 74.7% 166/94230402 0.0% 0/166 0.0% 39948510 NA +9433 chr4 + 190214555 102650533 102650532 102650740 208 TTACCTGAGTAAGGTAGATGGTATCTTTAAATGTGCGTAATGGATCTGTGCTTTGGGGGAGTTTGAAATGAAGTCCAGCCTGATAAAGCATTTGTTTGTTACCACCTTCGTGATGTTGTCGATGAAGTGAAAACTTGCTATTGAAAGACCAGTCCTCTGTAGACGAGACCTTTCAAATAAAGAATAAGAATTAGAAATCTGAAAGTTG chr4 + 94230402 62692706 62692705 62692908 62692706 62692705 62692908 203 TTACCTGAGTGAGGTAAATCATATCTTTGAACTTTTTTATGGGATCTGTGGTCTGGGGAAGCTTGAAATGATATGCAATCTGTTGAAGCATCTGGTCATTGCCATTTTCATGGTGCTGTCGATGGAGAGAGAAATTGCTTGTGTATGACCAGTCCTCAGCGGAGGAAACCTTTTAAA-----AACATAAGTAAAATATCTGAATGATG ..........:.....:..x:.......:..:x.x:x..xx.........x.:.....:..:.........x:.x..::...x.:......:..x.::..:...::...:..:..:........:..x..:..x.....xx..x.x...........x.::..x..:......:...-----..:.x:.:.x.:.x.......x.x.. 177M5D26M 147/203 72.4% 203/94230402 0.0% 5/203 2.5% 39957827 NA +12531 chr4 + 190214555 102657658 102657657 102657922 265 TTAGAAAATCAAACGATGACTTACCTTTTCTAATGTACTGAAGGACGGCCAGGACTGATATCCATATTCAGATGCAAATCGAGCTTTTGGGAAAACTTTCCAGTTCCAGCAATCACTGATATAGTCATAAAAATGTACATCACCAAAATAATTGCTATTAGGGTTTTGAGAGACCCAGGCTTCTGCAACAGTTTCAGCCCCATTTGTAGGACTGGACGTAATAAAAGGACGACTCTTGTCTCCCTGAGTTCAGAAATAAAATGAA chr4 + 94230402 62694521 62694520 62694779 62694521 62694520 62694779 259 TCGGAAGATCA------GCCTTACCTTTTTCAGCGTACTGAAAGATGGCCAGGATTGAAATCCATATTCTGAAGCAAAACGAGTTCTAGGATACATTGCCCAATTCCAGCAATCACTGCTGTAGTCATAAAAGTGAGTGTCACCATAATGTGTGTCATATGGATTCTCAGAGAGCCAGCCCTCTTTAATTGACTCCAAACCATTGGTAGGACTGGATACAACAAAAGGACGACTTTTATCTTCCTGTGATTAGAAAAAAAACAAA .::...:....------.x..........::.::........:..:........:...x..........x..x.....x....:.:.x..:x.x.:.x:...:...............x.:...........:..x:::......x...:xx..::..xx..:..:.x.....x....x.:...x:..:x.x:..x:xx.....x...........:::..:............:..:...:....x.x.:.....x....::.. 11M6D248M 189/259 73.0% 259/94230402 0.0% 6/259 2.3% 39963137 NA +7478 chr4 + 190214555 102664594 102664593 102664858 265 TCCCAAAGTGCTGGGATTACAGGCGT-GAGCCACCACGCCCAGCCCTAAAGATACATTCTTAAATTCTACTGCATTAAAAATCATTACTTACTGCCAGTACGAGCTCTCTGATGTTTTTCACATAGAGTGTCACATAGTCCTTGATGTAGATTGGCCGGTCAGTGAAACTGATATG--ATACCAATTCATCATCAGCGCCTCCTCATTTTCATTATTGCCACTCCATATGATGATAGAAGGATGAGATTTCAGTCTCTTGATCTGAAA chr4 + 94230402 62697770 62697769 62698020 62697770 62697769 62698020 251 TCCCAAGTTGCTCAAATTGCAAACATTAAAACATTTTGCCAAGCCATAAC------CCCCCACATTTTCTTGAA---------ATCACTTACAGCAAGAACTATTTCTCTGATGTTCTTCACATAAAGCATCACGTAATCTTTGATATAGACTTCTCTGTCAGC--ATGTGGTATGGAGAACCAGTTACTTGCAATTGCTGCTTCATTTTCATTGTTACCACTCCACAGAACAACTGATGGATGGGATTTTAACCGCCTTACCTGGAA ......:x....x::...:..::.:.-:.:x..::x:...x....x...x------::.::.x...:.x:..x.---------..:......x..x..x..x.x:...........:........:..::....:..:..:.....:....:.xx:.x.....:--.xx..:....--:x....:..xx.:::x.x:..:x.:...........:..:........:.x:.::.:x..x.....:.....:.::.x.:.x.:...:.. 26M1I23M6D18M9D81M2D10M2I90M 163/248 65.7% 251/94230402 0.0% 20/248 8.1% 39966824 NA +5885 chr4 + 190214555 102668956 102668955 102669077 122 AACATACCTGGTAGGCAACTTCTGCTGTCACTGAATCCAGGAAGCCCTGATCAGTTGGATAAAGGGCACAGGCAAACATAAAATCCTGCCATACCTAGCAAATCAAATA--AAAGGGAATGCAA chr4 + 94230402 62698476 62698475 62698596 62698476 62698475 62698596 121 AAAATACCTGATGAGAAACTTCTGCTCTTACTGATTCCAAGTAATCCGGGTCTGTTGGATACAGTGCACATGCAAACATAAAATCCTGCCAAATCTATGAG---AAATAGGAAAGAAAATACAA ..x.......:.::.x..........x.:.....x....:.x.::..x.:..x........x..x.....x....................x.:...xx.:---.....--....::...:... 101M3D5M2I13M 93/119 78.2% 121/94230402 0.0% 5/119 4.2% 39970480 NA +3668 chr4 + 190214555 102670016 102670015 102670097 82 GTGGTGACACACATCTGTAATCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----..:x....:.:...........:x........x.xx.x...x.:...........:..x.xx:.....:.. 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 26636815 NA +8604 chr4 + 190214555 102671238 102671237 102671410 173 ATATAGTAACTTATCAATATATAAAATGCTATCAAC-------TTCTCACCATTATTCCTAGTTCATCACAGAGTTCATAGAATTCATCCTGCTCATAAATTCCTCCTCCCCAAACCCGAAGAGTATTCATATTAGCATCCACAACAGACTGTAAAAGGAGCCGTAACCTGTAGAAGACA chr4 + 94230402 62701332 62701331 62701511 62701332 62701331 62701511 180 ATACAGTAGAGTATTTATACACAATACGCAGTCTGTATTTTTTTTTTTACCATTATTCCCAGTTCATCGCAAATATCGTAGAAATCATCCTGCTCATATATTCCTCCTCCCCATATCCTAAGTGCATTCATGTTAGCATCTGCTGCAGACTTCAAGAGTAGCCATAATCTGTCAAATACA ...:....:xx...:x...:.:..x.:..x:..x::-------..:.:...........:........:..:.xx..:.....x..............x..............x.:..x...x.:......:........::.x:......x:..:..x....:...:....x:..x... 36M7I137M 129/173 74.6% 180/94230402 0.0% 7/173 4.0% 39969906 NA +3453 chr4 + 190214555 102673371 102673370 102673450 80 AGTGGCCTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.....x....:.:...........::........x.xx.x...x.:.....:..::.:..x:xx:..:..:.. 5M2D73M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 26640171 NA +9289 chr4 + 190214555 102673895 102673894 102674123 229 AAGAAAAGAAAGACAATAACTTACAACTCAGAGGTTACTCGGTCCTGGAATGAATCTGCTGGGATCCAGTTTGAGCCTTTTAGAAATATGGGAAATCCATTAATTTTGAAATAGAAACTCAAACCAGGAGACCCTTTTATAGGCTCTTCTATAAGTTCCACTGTCCTAAAATAAACCTGCAATGAACAGAATTAAATGATGAATATCAAATTTAAACATAAGCAAAATA chr4 + 94230402 62702674 62702673 62702894 62702674 62702673 62702894 221 AAGAAAATATCAAATGTGGCTTACGTGTCATAGGTCACTCTATCCTGGAAAGAATCTGCTGGAATCCAGTTTGAGCCCTTCATGAAAATGGGTTGGCCATTGATTTTAAAGTAGAAACTCAGACCCAGAGATCCAGGAATAGGCTCCTGAACAAGTTCTACTGTCCGAAAATAGGCCTGTGA-----AGACATAAAACATAGATTTAAAG--CAGACA-AAGTAAAATA .......x.xx:.xx:.::.....:xx...x....:....x:........x...........:..............:..:.x:..x.....xx:x.....:.....:..:..........:...x:....:..xxxx........:.xx.:......:.......x......::....::.-----...xx....xx..::..x.x..:--:.:...-...:...... 182M5D23M2D6M1D10M 161/221 72.9% 221/94230402 0.0% 8/221 3.6% 39971221 NA +3055 chr4 + 190214555 102689335 102689334 102689401 67 CAAGACTCTGTCTCAAAAAAAAAAAATATATATATATATATATATGTGTGTGTGTATATATATGTAT chr4 + 94230402 60568546 60568545 60568612 60568546 60568545 60568612 67 CAGTACCTTTTCTAAAAAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTAT ..:x..::.x...x.....:.....xx:.:xx....:........x.x.......:.:...:..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 42120789 NA +9447 chr4 + 190214555 102690592 102690591 102690799 208 TTACCTTGCTAATGTTCACAAATAGCTCAACAATCCTTTTCCCAGGTTGAAGTTCAATGCTGTATGTCTGTTGTGTTTGCAACTTAGGGATGGCTACGATCACTTGACCACCAACTGGCTTTGAGCTGACAACATCAAATGTAGACTCTATTTCCAGATTCCACTCCTGGGCACTCTTATC----TAAAATATAAAAAGAAAAAGAAATATA chr4 + 94230402 62711274 62711273 62711485 62711274 62711273 62711485 212 TTACCTTGCTGATGTTTACAAGCAGCACAATACTGCCTTCACCAGGTTGCAGCTTCACACTGTATGTTTGCTGTGTTTGCAGTTTGGGAATGTTCACAGTTGCAAGACCTGCAATTGGCTTAGAGCCAACTACATTAAAGATGGACTCAATTTCAAGACTCCACTGCTGAGCTCTCCTCACTTAGTAAAGGGAAAGAAGAAATGGGAATACA ..........:.....:....::...x...:.x.x.:..:x........x..:.:x.::........:..:..........::..:..:...x::..::.::.xx....xx...:......x....::..x....:...x:.:.....x.....x...:......x...:..x...:.xx.----....:x:x..:......x:.:....:. 181M4I27M 147/208 70.7% 212/94230402 0.0% 4/208 1.9% 39979318 NA +3424 chr4 + 190214555 102703956 102703955 102704037 82 GTGGTGTCGAACACCTGTAGTACCAGCTACTCGGGAGGCTAAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......x.........:.::.....:..x.xx.x...x..........::.:..x.xx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 26670755 NA +3696 chr4 + 190214555 102709264 102709263 102709412 149 AGAGAGAAAGAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAA---GAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGA chr4 + 94230402 2498506 2498505 2498657 2498506 2498505 2498657 152 AGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA .....x::....::...x:.x:..:..x::x..x..x..x...x:x:.:...x::.:.:x:.x...---x:.::x....:....:::.x......:.xxxxx.:.:::...........::.:.:.....x..::x.....:...x..:.:. 66M3I83M 87/149 58.4% 152/94230402 0.0% 3/149 2.0% 100210758 90003797 +3348 chr4 + 190214555 102709272 102709271 102709403 132 AGAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAG---AAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAG-----AAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAA chr4 + 94230402 90064991 90064990 90065128 90064991 90064990 90065128 138 AGACAAGGAAAAAGGGGAAGAAGAGAGCAAAAAAGTTAAGGAAACAAATAAAGTTTAAAAAGGCAGTAAAGAAAACATGTGGGTTGAGATAAAAAATATTTAATAAGTGAAGAAGT--GGAAGAAAAGAAGGAAAATGAA ...x...:..:..:..:.:....::..x..::...xx.:.:.:.x..:x....---......:x..x..:...::x.x.x:..xx..:.x:....:-----..x...x:.:....x--........::...:..:.x:.. 53M3I40M5I15M2D22M 84/130 64.6% 138/94230402 0.0% 10/130 7.7% 12644281 NA +3111 chr4 + 190214555 102709308 102709307 102709376 69 AAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGA chr4 + 94230402 39594986 39594985 39595053 39594986 39594985 39595053 68 AGGCAAAAGGAGAAAAGAAATTCAAGGGGAG-AGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAA .:.x..:.::..........xxx..:..:..-.:..:...::.x:......:..............::. 31M1D37M 49/68 72.1% 68/94230402 0.0% 1/68 1.5% 63114322 NA +3042 chr4 + 190214555 102709343 102709342 102709417 75 GAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAA chr4 + 94230402 48901037 48901036 48901111 48901037 48901036 48901111 75 GATGGAAAAAAGGATAGAGGAGATAAAGAACAGTTGGGAGGCAGAAGGAGAGGCAGGTAGGAAACAGAGGAAGAA ..x....::...:.x...::...x......x:.xx..:...x....:..:..:x..:x.::...x.:..:..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 53808306 NA +3079 chr4 + 190214555 102709348 102709347 102709451 104 AAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGA-GAAAGGAAGGAAGGAAG chr4 + 94230402 65363837 65363836 65363941 65363837 65363836 65363941 105 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAG ...:..x:...:.x.xx..::x.....::.:.:.x:xx:..::...:x...:....:.:....x.x......::.xx...::.....-....::.x.:x...... 87M1I17M 65/104 62.5% 105/94230402 0.0% 1/104 1.0% 37345511 NA +3084 chr4 + 190214555 102709392 102709391 102709441 50 AAGAAAGAAAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAAAGGA chr4 + 94230402 57629739 57629738 57629788 57629739 57629738 57629788 50 AAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ..:.......x:...:::.::.......:...........::.:...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 45079653 NA +8222 chr4 + 190214555 102714387 102714386 102714568 182 TTTATAACAAGAAGACTCAAAAAGAAAAAAAAATCACATCTTTCAGCTTACCATATATTGGGGAAAATGTGAAGTAGTTCAGGTGACAAATATTATAGGCTTCAATTCTAACATCTTTCCAGATTCCCTGGGTAGGAAAGGAAGGCCCCCAGTCCCAACTAAAGGAACATTGCTCCTGCAAT chr4 + 94230402 62713819 62713818 62713998 62713819 62713818 62713998 180 TTTGTATCCCAGAGGTGAAAAAATAATAAAAGGTCGTAATGT--GACTTACCAAAGAAAGGAGTTAAAGAAAAGTAAATCAAATGATAAAGGTTATAGGCCTCAATCCTCACATCTTTCCAGATTCCTTGAGTGGGAAAAGAAGGGCCCCAGTCCCAGCTAAATGAACACTGCTCCTGGAAT ...:..x.xx::..::xx.....x..x....::..::.x:x.--::.......x.x.xx..:.xx..x.x:.....:x...::...:...x:........:.....:..x.................:..:..:.....:.....x...........:.....x.....:........x... 42M2D138M 130/180 72.2% 180/94230402 0.0% 2/180 1.1% 40000568 NA +9527 chr4 + 190214555 102722760 102722759 102723064 305 GAAAGAGATTCCTAACTTCTGAAATGCCATGGGAGTCTTCAAA---------TAAGCATTTCATATGCCAGCACACCCCG-TCCTCAAAAATAAAACCCGACCTGTTTGAGAGACCAT--------TACCTTCCGAACAAAGTTGACATGGCATTCACCCTTCTGCACAAGTGGAGGGCAGTCTGGGGGAACCTGGTAGCGAGTGTGAGCTTTGCTCTGCTGTGCTGCATACAACACCGCTGACTGGAAACGCAGCTCAATGGAGTTCACGTCCCTGACCACGTTGGTAATATCAAAGCTCTAAGTTAAAGGGAACAATCAGA chr4 + 94230402 62717015 62717014 62717327 62717015 62717014 62717327 313 GAAAAATATATCCCACTAATAAAATGACATTGAAGGTTTCAGAATACATCTGTAAGGACGGTGCAT---AGCACATTCCTCTCCTCATGCCTGAAGCCAAA-------GACAGACAGTACTTTACCTACCTTTCTGATGAAATTAGCATGGCACTCGCCTTTCTGCACAGGTGGAGGGCATGCCGGGGGGACGCTGTATGCTTTGTGACATCTGCTCTGCTCTGCAGCATATGAAATGGCCGACATGAAACGGACTTGAATAAAATTGACCTCCTTGATCATGCTGGTAATATCAAAGCTCTAGGTTAAGAGAAGAAAGCAAA ....:.x..x:.:x...xx.:.....x...x.:..x:....:.---------....x.:xx:::..---......::..x-......x:xx.:..:..x:.-------..x....x:.--------......:.x:.::..:..::.......:..:..:.........:..........xx.:.....:..x:x...xxxxx.....xx.:.........x...x.....::.x.:x..:...xx......x.x:.x...::.:..x..x...:...:..:.:...................:.....::.:.:x..x..:. 43M9I14M3D11M1I20M7D10M8I197M 201/295 68.1% 313/94230402 0.0% 28/295 9.5% 40005745 NA +7436 chr4 + 190214555 102723855 102723854 102723975 121 TACTTACATATCTATTGAACATATTGTCTGTTTCCCCAATAGTGACTTCATTGAACAGGATTTTTGAAACCGTATCCACTCCCTCAAGAATCAAATTTACTTTTTGCCATTTGCTAAAAAA chr4 + 94230402 62719223 62719222 62719343 62719223 62719222 62719343 121 TACTTACATATCTGTTGAACATGTTGTTTGTTCTCCCAAGAGTGATATTGTTGAGCAGGATGTGCGCTACTGTATCTACTCCCTCAAAAACCAAATTCACTTTCTGCCACTTTCTACAGAA .............:........:....:....::.....x.....:x.::....:......x.x:.xx..:.....:..........:..:......:.....:.....:..x...x.:.. 121M 95/121 78.5% 121/94230402 0.0% 0/121 0.0% 40004632 NA +5468 chr4 + 190214555 102726582 102726581 102726685 104 TACATACCTAATTTCAAAGGGGATTTTAAATTCTTTGCTATAGGTCCAGTTATCCAAAGAGACCCATCTGTAGTTAAGGTCATTAAATCTGTAGTAAGAATCCT chr4 + 94230402 62719825 62719824 62719928 62719825 62719824 62719928 104 TGCGTACCTGACATCAAAAGGAGTTTTGAATGTCCTGCTGTAAGTCCAGTTATCCAGTGAGATCCACCTGTACATCACATCATTAAATCTATTGTATGGATCCT .:.:.....:.:x.....:..::....:...x:::....:..:.............:x....:...:.....xx.x.x:...........:.x...x.:..... 104M 76/104 73.1% 104/94230402 0.0% 0/104 0.0% 40006757 NA +3453 chr4 + 190214555 102788770 102788769 102788841 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 26755564 NA +108195 chr4 + 190214555 102795664 102795663 102797508 1845 AATAAATCATGTCCAAACTACATATTAAAATGTTTATA--AAAAGTAAGTTTTAACATTTATTT-----CTAGCTTTCCACATGTGTGTGCAGACAAGGAATAAGATTGCACGTAAGTGTAAGCAGTGCAAAAATGTGGAAGTGGAGGAGTCACAGATGTGC---------------TAGAACTTTAAGAAATAAAGCAGTG---------AACAAAATCAAAATAAACAGGAAAAAT-------GTAAAACTATGGGATCAGAAT-TAGGAAAGGTGAA-GAATGGTAATGCCCTTGTTACTACAGAAGTTAAATCAGTGGCACAG----ATAGCACTTGTCAAACAAAAAACAATCCAATAGCATTGACTTTTATTCATTCATGTTAAGTCACCTGAAATGA------TATCTGTTGCATTTAAATGCTCATTAATGTAAATGGC--------TGAACAAATCCATTTCAATGGATACTCAATATCCCACATAGATAAGTCACTTCAACACAGCCTCATGACAACTCCCACACCAAAACAGTACTTTATTTTGCAAATTTTGACCCATTATTACTCCCATGTTGTTTTTTTTCAGCTGTCAAGTGTACAAGGTGAAGAGAAA---TTTCAGTTAG-----ACAGGGGCTGCACCTGGAAAATAAATTTCTTAAACTCCATAA-ACAC-ATTTCAAAACTGCTGGGTCCCAAAAGTCCATCTATGAACTCTAGGGCTGCCAGTATCATGTGCAGCACATTA---AAGCTACACTATCCAAATAGCTTATTAATTCTGCATAAATCAGGTCAAGCAATGTGTCAACCTGTAACAGACTGTGCACTTTAACTGAACATGGCAAAATATTCACTCTTTCGAACTTTACATCATCATTTGATGTCAAACAATGAAGCAAATCCCAACAGTATATACAAAAAACAGCTTTGCATTTACAAAAGATT--GTTTCCCATACTGATTAATCCAGGCAGCTAACTCATTGGTTTATGCAACTTTATTGAAGAAAAATAAATCAATTACTAGCAGAGCTATTAGTTGATCACTCATCCATTGACAACTTGCATCATTTATTCAGTGCTATATTAAACAGTGTATTGGAAGATAGATTAACTAATAGCTCCAAGCCTCCTAACAA--TTTAAATGAAAATTACAAAA-TGTT-TGAGACCCTATTTTGGAATACAAAGGGTGTTTGACTTCCAATTTCCATTCTCTGTAGAACAAGAACAGGTCATTCCTTTATTGACATGCATAAAATACATCACATTTTCTGTTCTGCTGATGCTATAAATTCAATACCAATTCTCCAGCCACATCAGTTATGAGCATAAAGCATATCATGTAACCTCAAATCTCTAACAGTGGAAGGCTTAAACAAGAATGGATGCTGCTAGAATAATGCTGTATCCTTTGATGTGA--CAACTGAGCATCCATCTCCCT----CCCCCTCAGATGATTTCTTCAGCAT--GTTAGAGCAGTGAGGAATGG----TTTTAGTCTCATAACCAAGTTAGAGTGAAGACATTGGCCACATAATACACATGCTCCATTTTTTTTTTTAAAAATTCTGAGTCTTGGGCAACTGTTCTCTTGTAACTACTTTACAGTTTCTAAAAGCAGTTATTGTCCAAAGCTGGAAGAACTTAAGTCTTCTCAGATGAGCATGTGAATGAATGGAGGGAGGTAAACAAAAAATAAAATTAAAAAAGATGAGGTCTGATAGGGGAGCAGCCGGATAAGAAAATCAAAAAAGGAACAGTAATTTAAAGTTTATTCCAGCTATAATGCAGGTTATTCTGACTTTAAGGTAGCATCACATGGCATACTTCTGAGTCCATTCCCGAGATATTCTGTTGTACCTGTAAATAAAGAT------GTTATTTTTAAAAGTTAAAATAAAGAATTCCTAA chr4 + 94230402 62740915 62740914 62742810 62740915 62740914 62742810 1896 AACAAATCATGTCCAAACTACATATTCttttttttatataaaaattaaGGTTTGACATTTATTTTACATCTAGCTTTCCACATCCATGTGGGGACAAGGAATCAGAATGTACATAACTATAAGCTGTGCAAAAGTGGTGCCGTG-CGAAGTCACAGATGCACAATAAGTTGATAGTACAAGACTAGAGAAAATGAAGCTATGGATGTTAAGAATGAAGACAAAAAAACCAACAAAAATCAAACAAGGAAATATATGAAGGAAGAGGGCAGGAGAGCCGGATGCTTAATAATGCCTTTGTTGCTGCAGA-GATAAACTAATGGCACAAGACAATGCTTCTTGTAGAACAAAAA----TCCAATAGCAATGAGTCTT---TATTCACGTTTAGTCACCTGACATGAGGAAAGTGTCTGTTGCATTAAAATAGTCATTAATGTAAATGGCAGCATGGCTGAACAAGTCCTTTTCAATGG-TAACGAACATCCCACATAGTAAATTCACTTCAACACAGCCTCATGACAATTCCCACATCAAAACAGTACTTTATTTTATAT-TTTTGCCTCATGATTACTCCCATATTAAGATCTTTCAGCTGTCAAGCGTACAAGGTGAAGAAAAAGGTTCTCAGTCAGCAAACACAGG---TGCATCAGGAAGC-----------ATCTCCACAATACACCACTTCAGATCTGCTGGGTCCCAA--GTCCATCCTTGAACGCT-GGGCTCCCAGCACCACGTGTAGCACACTACTAAGGCTACACTACTATGTTAGCTTATTAATTCTGCATACACCAGGCCGAACAATGTGTCAACCTGCAAAAGACTGAGCATTATAACTGAAAATGGCAAAAGATTCACTCTATTGAACTTCACATCATTATTTGATGTTAAACAATGAGGCAAATCCCAACAGTATATACAAAAACCAGCTTTGCTTTTACAAAAGATTTTGTTTCCCATATTGATTAATCCAGGCAGCTAACTCATTGGTTTATGCAACTTTATTGAAGAAAA-TAAATCAATTACTAGTAGAGCTATTAGTTGATCACTCATCCATTTACAACTTGCATCATTTATTCAGTGCTATATTAAACAGTGTTTTGGAAGACAGATTAACTAATAGCTCCAAGCCTCCTAACAAAATTTAAATGAA--TTACAAAAATGTTCTTAGACCCTATTTTGGAATACAAGGGATGTTTGACTTCCAATTTCCATTCTCTGTAAAACAAGAACTGGTCATTCCTTTATTGACATGCATAAGATACATCACATTTTCTGTTCTGCTGATGCTATAGATTCAGTACCAATTCTCCAGACATATCAGTTATGAGCA-AATGTATATAATAAAACCTCAGTTCTCTAACACTAGAAGGTTTGTAACAAGATGGATGTTGCTACAGCAATGTTAC-TTCTTTGATGGGAGAAAACTGAACATCCATCTCCTCTCACCCCTTTCAGGTGGCATCTTCAGTATCTGTTAGAGCAATGAGGAATGTATTTTTTTAATCTCATAACCAAGTTAGAATGAAGACATTGGCCACATAATACACATGCTCCATTAAAA-----AAAAATTCTGAATCTTGGGCAATTGTTCTTGTGTAACTACTTTACAGATTCTAAAAGCAGTTATTGTCCAAAGCTGGAAGAACTAAAGTCTTCTCAGATGAGCATGTGCATGAATGGAAGGAGGTAAACAAAAAAA-----TAAAAAAGATGAGGTCTGATAGGGGAGCAGCCGGATAAGAAAATCAAAAAAGGAACAGTAATTTAAAGTTTATTCCAGCTATAATGCAGGTTATTCTGACTTTAAGGTAGCATCACATGGCATACTTCTGAGTCCATTCCCGAGATATTCTGTTGTACCTGCAAAAAACAAGAACTGAGTTACTGCC-AGCGTGAAAATAACAATTCCCTAA ..:.......................xxxx.x......--....x....x...:..........-----..............x::....x:..........x...x..:..:...x.:.....x........:..xx.xx...-x.:...........::.---------------:.::...xx.::....:....x:..---------..::..:x.....x..x..:x......-------.x...xx....:::xx...:x-:....:..x:.:.-.xx.::.......:.....:..:....-.x....::.:.......:----..:x:x.....x:........----..........x...x.:..---:.....:...x..........x....------.:...........x....:x.................--------.......:...x.........-..x:x..:...........xx..x.........................:.......:...................::.x-.....x.:...x...........:..:xxx.:..............:..............:...---.:.....:..-----.....---....:.x....:x-----------.x.....:..-....-.:....:.x..............--.......:x.....x..-.....x....:.:..:...:......:..---.:.........::xx:x....................x.:....:.:.:...............:..x......x...:.x........x.........x.........x.:......:.......:.........:.........:..........................x.........x.............--..........:....................................................-...............:............................x........................................x........:................................--..........--........-....-.x.....................:..:.............................:.........x..........................:.................................:.....:..............x..:..............-..x.:....x..:x.......:x.........x.:.....:..:x.xx.::.......:.....x.::....:.::-.:........x..--x......:...........::----...::....:..::x.......:..--.........:.........x----.....:..................:...................................xxxx-----...........:..........:......:x................x....................................x.......................x.........:................x-----.................................................................................................................................................................:...x..x:.x------....:.x::-.:x..x.......x:.x.:..... 38M2I24M5I75M1D17M15I25M9I27M7I21M1I13M1I27M1D18M4I21M4D19M3D26M6I37M8I21M1D81M1D65M3I10M5I5M3D13M11D10M1I4M1I23M2D17M1D29M3I197M2I63M1D127M2I10M2D8M1I4M1I166M1D76M1D13M2I21M4I25M2I20M4I64M5D136M5D172M6I9M1D24M 1553/1801 86.2% 1896/94230402 0.0% 139/1801 7.7% 40054749 NA +21204 chr4 + 190214555 102798712 102798711 102799510 799 CTATTGTAACTGCTTTGCCAT-GCAGTACTTTCAAGCAATAACGGCTACCAGATATTTACTTTCACGTTAAACAGAGACCAAGCAGTTAAATGTACAGTTTTCAGAAGACTGCCATATTTGTTACCTTTTGTTAGTTAATACAGTGCCTTAACGCATGCAGCACTCAAGTGCTGGCAG--TACCA----TAATAAGCGCACCATAGAGTGCAGATCCTCTTACCCTACAACATAGCGTATTTCTCTGTCCACTCTCTTGCTAACCTATTGTACCTAATTGAACAAGTACACTTAGCATTAAT---------TATAACATATGAAAGTTATAATG-GTTAAGTTGAACATAAATATAATTCAAA-TATTTGAGAAATTTAGACCAAATTTTTACAATAGTACTAACATTTTTGGAAAAACAT-----GCTTGGGGTAAAGAAAAATTTGCTTTCTTCCCCAAAAGTTGAGAATAAAGTGATACTGTTTAACACGCTAGGAAAAAAAAAACAACAATAAAACA-----------TTTTAGAGGGGAGCATTCACTGTCACA-----------TAAGCTAAAGCCTAGT----TAAGTTTTTTTAAATA--ACCACATTTC---------AATAGCTTTCT----CCATATTTTAA------------CTATTATCTTACTAAATATCAAGTCTTCTTGGCACTGTCACAAGCAA----------------------AGTATAAGCCTAACTCA-------------TTAAGTAAA--------ACCACTTTTATAATAA-----CTTTTTAACA------TACTTACTTATCTCTGTCTGTTTTATAGATCCGTGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCACATAGCAGTGAACAAATGGATAAAAGAACTGCAAGAAA chr4 + 94230402 62743626 62743625 62744505 62743626 62743625 62744505 880 CTGTTGTTGTTGCCATGCAAGAGCAGTATCTGTGAGAAATAGTGACTGGCCAATAC---ATTTCACACTAACCACAGATCAAGCAGTTAAATACTCAAGTT-CAGTA-ACTGGTCCATCCATTATCT---GTTAGTTAATCCAGTGCCTTAAAGCATGCAGCACTCAAGTGCTGACAAGTTTCCAGTTTTGTTAAATGCACCGTAATGTGCAGATATTCTTACCCTACAGCATAGCGTATTTCTCTGTCCACTCTCTTGCTAACCTATTGTACCTAATTGGACAAGTATATTTAGCATTAATATATTTATATAAAACAAACAAAGGCTACTTTATGTCATTCTATCCGTGGAAAAAGTTAAAAACATGTAAGGAATAAAAAC--AATCATTTCAACAAAGATA--------GGAAAAACATACGAAGCTTTGTTCAAGGGGAAATTCTC-----------AAATTAAAGACCAAGCTGCTACT-----------------AAAAAGAGCACCAAAACAACAAAGCTGTCTTTTCTTCCATCTGAGTAT---CTGTCCTACTTATGCACAGTAAGCCAATAAATGGGGCAACATGTACTTTCAAATATCACCATACTTGTGAGAAAAGGATAGCTTCCTTCTTCCTTACCTTCAAAGATCTAAGCCCCATTGTTTAAATTACTATTGAGAACAGATACTATTTTTACACACAGTTCTCTCCACTTTGGATTTCCCACTAAAAGACTCGCTCAGTACAACTGCTGTTTGAGAAAGCACTCTTCACCAAGTTTGTAAGAATACTGCTCTTATACAACTCTGTACTTACTTGTCTCTGTCTGTTTTATAGATACGTGCAATCTCTGGCACTAGAGGGTCATCTGGATTTGGATCACATAACAGTGAACAAATGGATAAGAGAACTGTAAAAAA ..:....x::...:x...x.x-......::.x::..x....::.:..:x.x:...:---x......::...x..x...:.............::x..:x..-...x.-....x:x:..:::...:..---..........x...........x.....................:..:--.x...----.:x...::.....:..:x........x:............:..................................................:.......:.:...........---------..x....x.::..:.:..:xx.:-..:.xx:.:xx.:.::.x.x.:..x...-:..x.:..:...xx.:..--...:x..x...:.:x:x..--------..........-----....x.xx:..:.::.....:x.-----------...x.x:...x:..:x..x....-----------------.....:.:..x...x.x....-----------.:..xx.xxx...:..---.....x:.-----------.....:..x:xx.:.x----:.x..x:...:.....--....:.:..x---------:.......:..----..x..::..x.------------.:...:.:.x.x.x.x...::..xx:xxx.:x:.:.x.:...x:..:----------------------.x..x...x..x:....-------------..:..x..:--------....xx...:...x..-----..:..xx...------.........:....................x....................:...........:.............:..................:.......:..:... 21M1I34M3D42M1D5M1D19M3D48M2I5M4I113M9I23M1I28M1I18M2D19M8D10M5I23M11D23M17D21M11I16M3D8M11I16M4I16M2I10M9I11M4I11M12I47M22I17M13I9M8I16M5I10M6I111M 552/750 73.6% 880/94230402 0.0% 179/750 23.9% 40055086 NA +10525 chr4 + 190214555 102801420 102801419 102801571 152 AATGAGAACAGCTTATTTCACTAGAAATATTTACCTTTAGAAATTGTTAAAGCAGGCGACCACTGTGATCTTAGAATATCGAGACAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTAAAACAAAAA chr4 + 94230402 62745811 62745810 62745959 62745811 62745810 62745959 149 AATGGAAACATCTC---TCCCTCACAGAAGTTACCTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGACAAATGCTGCCATTACTGTTAATATTTGGATGATAGATTCTTGTTGTAAATGCAACCTGTAACACAAA ....::....x..:---..x..x:x.:x.x..............x...........x..............................................................:......................:x....x... 14M3D135M 132/149 88.6% 149/94230402 0.0% 3/149 2.0% 40055609 NA +8241 chr4 + 190214555 102802552 102802551 102802708 157 AATACTTGCCTTAGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCGCCTTGATATGGGCTGTCATTCTGTAAAAAGAAA-----------------AGTATGCTTAACTCAAATTT----AAAATATTATTGCTAAATATTCCGTAACATTTGTTTC chr4 + 94230402 62746734 62746733 62746911 62746734 62746733 62746911 178 AATACTTACCTTAGGTGGTTTGAAAGGGTAGTCTGTAGGAAAGTGAATTGTCAAGAAGAATACACCACCCTGATATGGACTGTCATTCTGCCAAAGTAAACAGATAATTCTCCTTTTATCATCCTTAGGACAAATTCCAAGAAGATGTTGTTTTTAAATACATATAGAAACTTGTTTC .......:................:.................:...........:...........:..:........:...........:x...:x...-----------------.x:..x....:xx......:----..:..:..:..x:......:x:xxx:.x.:....... 100M17I20M4I37M 125/157 79.6% 178/94230402 0.0% 21/157 13.4% 40055818 NA +9642 chr4 + 190214555 102809639 102809638 102809921 283 TTAAAACTAAATTTAAAAATTCTTAATACTTACAGGTCCCATAATTGTGGCTTGCCAATGAAACACTAGAAAAAGAAAAAAAACTCTG----GTTATCTAAAAATGCACAAGCTT---------AAAAAAAAATTAGGCATAAAAATCAACTTGCAAGTTACTTACTATCATCCCCAACTGGACCTGCAGAACATTGTGCTGGAGGGTCACGGGCCAAATCACTAAGTTCC-TACACCAAGACAGAAAATGGGTGAGTCACATAAGCTTAATTTAAGAAAACAAGCAAATGAGTCCA chr4 + 94230402 62749063 62749062 62749333 62749063 62749062 62749333 271 TTAATATTACATCACAAGAATTAGAATACTTACAGGTCCCATAATTGTGGCTTGCCAATGAAACACTACAAAAG----AAAAACTCCGCATTATTATCTAGGCATG-GTATGCTTTGTGTTAGTAGAGCAAAACTA------AAAATCTA-----AGATTACTTACTGTCATCTCCAACGGGACCTGCTGAACACTGTGCGGGAGGATCGCGAGCTAAGTCACTAAGTTCCTTAGGAAGAAACAAAAAA----------ACAAAGATCTGTTCAGAGAAGGAGCGCTAATGAATTCA ....x.:..x..:xx..:.x.:xx............................................x....:----........:.----:.......::x...-::.x....---------.:.:x....:..------......x.-----.::.........:.....:.....x........x.....:.....x.....:..:..:..:..:............-..x:xx:.:...:....----------...x.::::.:x.:x:....::x:x..x.....:.:.. 74M4D10M4I14M1D8M9I12M6D8M5D76M1I17M10D38M 193/257 75.1% 271/94230402 0.0% 40/257 15.6% 40060576 NA +3270 chr4 + 190214555 102819201 102819200 102819272 72 GTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAGACGGTGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........:..:........x.xx.x...x::...........:..x:xxx..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 26785995 NA +3156 chr4 + 190214555 102851629 102851628 102851688 60 TAATATTAGAACCCCCATTTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTTTTGAGA chr4 + 94230402 93010130 93010129 93010189 93010130 93010129 93010189 60 TAGAACTGGGACTTCTCTGTTTCTTTGTTTTGTTTTGTTTTTTTTTTTTTGCCCTTGAGA ..:x.:.:.:..::.:x.x...:....................x......x:::...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 9841499 NA +3039 chr4 + 190214555 102851648 102851647 102851680 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT chr4 + 94230402 72938557 72938556 72938589 72938557 72938556 72938589 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 29913091 NA +3515 chr4 + 190214555 102865352 102865351 102865434 83 AGTGGTGGCGGGCGCCTGTAGTCCCAGCTACATGGAAGGCTGAGGCAGGAGGATCACTTGAACCTGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----.:.x......:........x..:.........x.xx.x.:.x..........::.:..x:xx:..:..... 7M5D71M 58/78 74.4% 78/94230402 0.0% 5/78 6.4% 26832152 NA +6526 chr4 + 190214555 102868891 102868890 102869290 400 GCCGCGAG---CGTACGTCAC-TCGCCCGCCGCCAATCGGCGCCCGGCAG-GTCACCTCTCCTCCCAGGGCCCGCCGCCCCGCCCGCCGCCCAGGCC----------GAGGCCGCCAGTGCCCGCCGGC--CGCTTCCGCTCCCGGCG-------CAGGCGCGGCAG--------------CTTGGC-CA-GAGCGGAGGGGGCTCGGGAGAGGAGTGGACG------------------------------CCGCTG-------------GCCAGGATGGTGCTGGAGAGCGTGGCCCGTATCGTGAAGGTGCAGCTCCCTGCATATCTGAAGCGGCTCCCAGTCCCTGAAAGCATTACCGGGTTCGCTAGGCTCACAGGTAATCCTCCCCCATCAGCCAGTCCCCATCCTTGCACGTTCGCCAAGCG--GGGGAAGGAGGCGTAAAAATCCTAGGGCCAAGGGGCGGGACGGAGCTCGGCGCC chr4 + 94230402 62776492 62776491 62776947 62776492 62776491 62776947 456 GCCGAGAGAACCGTCCACCACCTCGCTCGCCTCAGCCCCGCGCCCCACCGAGGCGGCGCTCAGCC--GCGCCCATCGCCCCTCCCGTCGCAACGGCCACTGCCCTCTGCGGCTGC-AGCGCCCCCCTGCGGCGTTCCCGGCCCGAGCGGTGGGGGCGGGCCCGGCAGGCGCCGTTCCATCCCGTGGCGCATGCGCGACGGGGGCGGGCTGAAGAAGCGGGCGGTGCTAACGGCCGTCGCGCGTGCCCTCCTCCCGCTGCTGCTGGGGGGTCGCCGCCATGGTGCTGGAGAGCCTGGCGCGTATCGTTAAGGTTCAGCTGCCCGCCTACCTCAAGCGCCTGCCTTTGCCCGAGAGCGTCGGCGGCTTCCTCCGCCTCACAGGTAGG-------CGGAGGCCCGGCCCTCTCCCCGC-CGTCCTCCCTGCGCCGGGGACGGTG------------------TGGGGGGCGCGACGGGGCCGGGGGCC ....x...---...x.::...-....:....x.x:x:.x......x:.x.-.x.:x.x...xx..--.x....::......x....:...xxx....----------.x...:..-..:....x..x..--..:.:...x:..x:...-------.:...x......--------------.x....-..-.x...:x......xx.xx::..:..:..:..------------------------------......-------------...:xx...............x....x........x.....x.....x..:..x..:..x.....x..x..xx.x..:..:...:.::x...x...x::x.x..........:x-------.:xx:...x.x...:x...::..-...:.x..xx...--.....x..x.------------------:::......x.....:..:x..x... 8M3I10M1I28M1I14M2D30M10I8M1D13M2I17M7I12M14I6M1I2M1I31M30I6M13I114M7D23M1D13M2I10M18D26M 262/371 70.6% 456/94230402 0.0% 114/371 30.7% 40092399 NA +3094 chr4 + 190214555 102872061 102872060 102872105 45 TTATGTTTAACTTAGGTTTTTGTTTTGTTTTGTTTTTTGAGAGGG chr4 + 94230402 79271728 79271727 79271772 79271728 79271727 79271772 45 TTTTTTTTTTCCTAGGTTTTTGTTTTGTTTTGTTTTTTAAGAGGG ..x.x...xx.:..........................:...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 23600333 NA +3011 chr4 + 190214555 102878116 102878115 102878156 41 GGGTTTTTCTTTTTTTTGGGGGGGCGGGGGGAAGGAGGGGG chr4 + 94230402 90117476 90117475 90117516 90117476 90117475 90117516 41 GGTTTTTTCCTTTTTTTGGGGGGGGGAGGGGGAAGAGGGGG ..x......:..............x.:....:.:....... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 12760640 NA +16385 chr4 + 190214555 102885211 102885210 102885447 237 TTTAGTTTCAGAATGGCTTCGGTTATTGCCTTTCCTTGGTGTACTCGCACTTCTTGGCTACCTTGCAGTTCGTCCATTCCTCCCGAAGAAGAAACAACAGAAGGATAGCTTGATTAATCTTAAAATACAAAAGGAAAATCCGAAAGTAGTGAATGAAATAAACATTGAAGATTTGTGTCTTACTAAAGCAGCTTATTGTAGGTGTTGGCGTTCTAAAACGGTAAGATGTCTGTTTAC chr4 + 94230402 62782245 62782244 62782478 62782245 62782244 62782478 234 TTCAGTTTCAGAATGGCTGCGGTTATTGCCTTTCCTGGGTGTGCTGGCTTTGCTTGGGTACCTTGCTGTTCGTCCGTTCCTTCCCAAGAAGAAACAGCAAAAAGATAGTTTGATTAACCTCAAGATCCAGAAGGAAAATCCAAAAGTAGTGAATGAAATAAACATCGAAGATCTGTGTCTCACTAA---AGCTTACTGCAGGTGTTGGCGTTCTAAGACGGTAAGATACCTTGTTGC ..:...............x.................x.....:..x..x:.x.....x........x........:.....:..x...........:..:..:.....:........:..:..:..x..:...........:.......................:......:.......:.....---......:..:.................:..........::..xx..:. 186M3D48M 200/234 85.5% 234/94230402 0.0% 3/234 1.3% 40102966 NA +3666 chr4 + 190214555 102886361 102886360 102886433 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.x:..x.............:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 26853156 NA +7478 chr4 + 190214555 102887323 102887322 102887433 111 ATTCTTTTTTCTTTTTAGTTTCCTGCCTGCGATGGTTCACATAATAAACACAATGAATTGACAGGAGATAATGTGGGTCCACTAATACTGAAGAAGAAAGAAGTATAATAA chr4 + 94230402 62782717 62782716 62782827 62782717 62782716 62782827 111 ATGTTTGTTTTCTTCCAGTTCCCTGTCTGTGATGGCTCTCATAACAAGCACAATGAATTAACAGGAGATAATGTAGGACCACTAATACTCAAGAAGAAAGAAGTATAGCAA ..x:..x...::..::....:....:...:.....:..x.....:..:...........:..............:..x...........x.................::.. 111M 91/111 82.0% 111/94230402 0.0% 0/111 0.0% 40104606 NA +5752 chr4 + 190214555 102901183 102901182 102901337 155 TTTAGGCCCCAGAATGCCCATAAGTAGAGCTCCATTTGGAGCTGTGATCAAGATGGCTAAAAATGCTACTGTCATCACATCCTTCGCATATGGTTCCAAGTG--GGGTGCGGAGAC-TCTTGCTGTTTCTAGAGCCAGAGGACCTAACACAGCCTGCA chr4 + 94230402 62788043 62788042 62788200 62788043 62788042 62788200 158 TCTGGGCCCTGCCAAGCCAATAACCAAGGCTCCAATGGGAGCAGTGATCAAGATAGCCAAGAAAGCTACTGTTAGTACATCCATTCCATACTTTTCCAGTTGCTCATCCTGATGACTTCTTGCTGTATCCAGGGCAAGGGAACCTATTGCAGCCTATA .:.:.....::xx.x...x....x:.::......x.x.....x...........:..:..:..x........:.x:......x.:x....:xx.....:x..--x:x:x:.:x...-.........x..:..:..x..:.:.....x::......::. 102M2I12M1I41M 106/155 68.4% 158/94230402 0.0% 3/155 1.9% 40113140 NA +7331 chr4 + 190214555 102905510 102905509 102905731 222 TTACCTGTACTGTAGCTTTGGGCATCCATGCTAAAGCAATAAATATTTTCTCCTTAAAACTAAAACCAGCAAAGCACATCAATAGATATGTGGTTAAAATTCGAACACATAATGCCAAACTTAGAGTGGCAACAGATATGCCTACAACAGATGAAAACAAACATAAATAACAAAATATTTGTGAAGAAGTGTTCTTCATGCCCAGGAATATGATTTCTAAAA chr4 + 94230402 62789184 62789183 62789393 62789184 62789183 62789393 210 TTACCTGGACAGTGGCTTTGGGAATCCACGCCAGTGAGACAAATACTTTCTCCTTGAAATTAAACCCAGCAAAACACACCATCAGGAATGTCACAATGATTCGCACAGCTAGGGCAATACCTAGTGTAGCAACACAGAGCCCTGCAACA----AAGACAA--ATACGTCTCACTACTTTTGTGCATAGGTG--CCTGAGG----GGAATAAGCCTTCTAAAA .......x..x..:........x.....:..:.:x.x:.:.....:.........:...:....x........:....:..x:..:x....x::x.x:.....x...xx..:x..x.x..:...x..:......x.x.xx...:.....----..:....--...x:.xx..xx.:x......x.x.:...--.:.x.x.----......x.x:........ 149M4D7M2D29M2D7M4D18M 150/210 71.4% 210/94230402 0.0% 12/210 5.7% 40116326 NA +6225 chr4 + 190214555 102906530 102906529 102906669 140 TCTTACCAACAATATTTGATTCAAGCGATGAAACAGATACTTCTGCTCCAACTAAACCAAAAAGAAGTGGTTGAAAAATATCCCATACAGTCGTAATAATCTTTTGGACTTTCATCT---------ATAGAAAAGAGAAATACATTTAT chr4 + 94230402 62789514 62789513 62789662 62789514 62789513 62789662 149 TCTTACCAACAGTTTCAGGCCTGAGAGATGTAACAGATACTTCTGCTCCAATCAATCCAAAAAGAAAAGGCTGAAAGATATTCCAAGCAACGGCAACAATTTTTTCTACTTCCTTCTGCAATAGCAATAATTAAAAAAAATCCATCAAT ...........:.x.:x.:::::..x....x....................::..x..........:x..:.....:....:...x:..::x.:..:...:....xx....:.x...---------...:xx..:.:....x...:x.. 117M9I23M 101/140 72.1% 149/94230402 0.0% 9/140 6.4% 40117016 NA +3138 chr4 + 190214555 102908381 102908380 102908442 62 TGTGTAT-AGATATATATATATACATACACACACATCAGGCATGATGTAGTTCTATCTCTGTT chr4 + 94230402 30834200 30834199 30834262 30834200 30834199 30834262 63 TATGTATTATATATATATATATACACACACACACACAGGAGGTAATGCAGTTCTGTCTTCTTT .:.....-.x...............:.........:x:.:x:.:...:......:...::x.. 7M1I55M 47/62 75.8% 63/94230402 0.0% 1/62 1.6% 72074181 NA +3218 chr4 + 190214555 102909472 102909471 102909545 74 GTGCGCCTGTAATCCCAGCTACTAGGGAGGCTGAAACAGAAGAATCACTTGAATCCAGGAGGTGGAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........x.::.......:x.xx:x...x........:....:..x.xx:.x:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 26876268 NA +5318 chr4 + 190214555 102910429 102910428 102910578 150 AAATATTCACCTTTTCTTGGGACCATTTTGTCCCTGCAATGAAACTCAACACTAGTGTGCATAATCCTCCAGATCCATGTAAACCAATACGTTGGCTGCCTAAGACGGCAGAAACACACATAGTCAAA--ACAAGGAATCCTCTCTTCAATG chr4 + 94230402 62791793 62791792 62791942 62791793 62791792 62791942 150 AAACATTCACCTTCTCGTCAGACCATCCCACGCCGGCAATAAAAGCTAAGACTAATGTGCAGAGCCCTCCTGATCCAGGGAAGCCAAAGTAGACGCTGCCAAAAACAGC--AAACATGGACAGCCCAAGTACAAAATATGATCTCTTCCATG ...:.........:..x.x:......:::::x..x.....:...x::..x....:......x.::.....x......x.x..:....x:::xxx......x..:..:..--.....::x.:..:.x..--....::x..xx.......x... 109M2D17M2I22M 101/148 68.2% 150/94230402 0.0% 4/148 2.7% 40118636 NA +3056 chr4 + 190214555 102913522 102913521 102913581 60 TTTTTCAAACGTCCAAATCTTGGCAAAAATAAGTAAAAAATAAAAAAATAAAAAATAACA chr4 + 94230402 71494304 71494303 71494363 71494304 71494303 71494363 60 TTTTTTAAAAGCCCGAAGTATGCCAATAATAAGTAAAAAAAATAAAAATGAAAGACAATA .....:...x.:..:..x:x..x...x.............x.x......:...:.:..:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 31419218 NA +3045 chr4 + 190214555 102918067 102918066 102918123 57 TCAAAAAAAAAAAAAAAAAAAAGGCTAGAGAAAAAAAAAACCCAATGAAACTAGTAG chr4 + 94230402 93207377 93207376 93207433 93207377 93207376 93207433 57 TTAAACAAAAAAAAAAAAAAAAGGGTAGCAAAATAAAAAAATAAGTGAATTTAGTGG .:...x..................x...x:...x......x:x.:....x:....:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 9710690 NA +10331 chr4 + 190214555 102932100 102932099 102932306 207 TGGTTGTTAT---------ATTTTCTTGTTTACCTGAGGAAAAGACTATGCTCAAGCATGTATTGAATCCAGTGATAGCCAGAATGTCATCCATACTGCTAGCAGCCATTAATAAGGTTGGAATGCCTTCCTCAACACCATATCCATTTTCTTGCAGCACCATCATGTAAGGGACAACAACAGCAGGAGAGACAGCACCTAGAACAAAACTGAAAG chr4 + 94230402 62793674 62793673 62793889 62793674 62793673 62793889 216 TGGTTGTCATCACCTAGAGATTAACTAGCATACCAGAAGAGAAAGCCATCCCAAGGCAAGTATTGAAGCCTGTAATAGCCAGAATGTCGTCAATGCTTCCAGCTGCCATTAGCAGAGTTGGGACACCTTTCTCCACTCCATATCCCCCAGCTTGTAAGATCAGCATTGAAGGAACCACAACAGCGGGAGAGACTGCACCTAGAACAAAACTGAAAG .......:..---------...xx..x.:x....x..:..:..::.:..x.:x.:...x........x..x..:..............:..x..:..x.:...x.......::.::.....:.::....:...x..x........x::xx....:.:x.:..x...xx....:..x........:........x...................... 10M9I197M 155/207 74.9% 216/94230402 0.0% 9/207 4.3% 40138426 NA +4266 chr4 + 190214555 102934628 102934627 102934708 81 CAGTGGTGCATGCCTGTAGTCCCAGCTACTTGGAAGGTTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........:.--......:...........:....:....x.xx.x...x...........:.:..x.xx:..:..:.. 12M2D67M 62/79 78.5% 79/94230402 0.0% 2/79 2.5% 26901429 NA +3161 chr4 + 190214555 102942065 102942064 102942116 52 AAAAACAAACAAACAAACAACAAACAAACAAACAAAACCAAAGAAAAAACCC chr4 + 94230402 47343836 47343835 47343887 47343836 47343835 47343887 52 AAGCACACACACACACACAACAAACAAACAAAAAAAACCACCAAAAAAACCC ..:x...x...x...x................x.......xx:......... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 55598229 NA +3025 chr4 + 190214555 102943468 102943467 102943522 55 TGTATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACAC chr4 + 94230402 47135185 47135184 47135239 47135185 47135184 47135239 55 TGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC ..:...:.:.:.x...x:.x.:.:..:....:.:...:...........:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 55808283 NA +5750 chr4 + 190214555 102945165 102945164 102945333 169 TCATAAGAAAAAATGAGAAAGAAATTACCCTAATAGAAATGCCCATTGCCAGGGAAATTTCATAATGAAGTGTGAAAAAACAGCAGCTGCACTTGCCTCCATAAGGCATGGACCTACAGCCAATCTGAAACAAACGACCTTCAAATGCCTCAAAGCCTGAAACACAAAA chr4 + 94230402 62794720 62794719 62794888 62794720 62794719 62794888 169 TCATATAGGAGAAAAGGCAGTACATTACCCTAATATAAATCCCCACTGCCACGGCAAATGCATGAGTAAATAGGCAAAAACAGCAGCAGTGCATGTTTCTGAGAGGCATGGTCCAAAAGAAAGCCGTAAGCAGACTGCTTTGAGCTTCTTAAGAGCCTACAACATAAAA .....x:::.:..x::.x.:x.x............x....x....:.....x..x..x.x...:.xx..:.:x.x............x.::.x..::..::x:........x..x.x..xx.::.xx..:..:..x:.:..x.:x.x.:.x.:.....:x....:.... 169M 109/169 64.5% 169/94230402 0.0% 0/169 0.0% 40150445 NA +3140 chr4 + 190214555 102946286 102946285 102946326 41 CTTCTGTTTTTTTCTTCTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 12568753 12568752 12568793 12568753 12568752 12568793 41 CTTCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTT .............:x.:...................x.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 90377533 NA +5960 chr4 + 190214555 102949228 102949227 102949410 183 AAAGAAAAGAGAGCTAATTATATACTTACCAAGAAGAGGTGGAAGTGGAGGCACTAAAGGTATTCTAATGAGTTGTAAAATTTTTCCCCCAATAATGGCACTATAAAAAATAATGA-ACAA---CCCAAATAAATTTCCACCAGGGAGAGCTTCAGAGCCTAAGATTGACCAGGTCATACACCATAT chr4 + 94230402 62799066 62799065 62799245 62799066 62799065 62799245 180 AAAGAAAAGAAGGAAAGGCAT---CTTACCCAGAAGGGCAGGGAGGGGAGGCAGTGTTCCTATTTTAATGAGTCCAAAAATTTTACCTCCGATGACAGCA----AAAAAATAAAGACACAAAATTCCAAACAGGTTTCCGCCCGGGAGACATTCAGGCCCAGTGATGGACCAAACCACAGCCCAAAT ..........::.xx.:x:..---......x.....:.xx..:..x.......x.:xxxx....:........:xx........x..:..:..:.::...----.........x..-....---:.....:.::.....:..x......xx.....:x..x:x...x.....:::..:.xx...x.. 21M3D76M4D12M1I4M3I63M 125/176 71.0% 180/94230402 0.0% 11/176 6.2% 40150162 NA +3054 chr4 + 190214555 102955784 102955783 102955842 59 AAAAAAGAAAGAAAGAGAGAGAGAGAAACAACAAACAAAGTGGAAGAAAGAAAGAGAGA chr4 + 94230402 24148916 24148915 24148974 24148916 24148915 24148974 59 AAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGA ......:...:.:.........:.:...:x..x:xxx:...........:...:.:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 78806868 NA +3089 chr4 + 190214555 102958783 102958782 102958865 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACTCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::........x.xx.x...xx:.x.....:.:.:..x.xx:.x:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 26925586 NA +3105 chr4 + 190214555 102969403 102969402 102969456 54 GATTGTTAGAAGGAAAACTAACAAACAGAAAGGAACAGCATCAACAAAAAGGAC chr4 + 94230402 27313585 27313584 27313638 27313585 27313584 27313638 54 GATTATTATGAGGAAAAACAAAAAACAGAAAACAACAACAACAACAAAAAAAAC ....:...x:.......x:..x.........:x....:..x.........::.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 75655818 NA +3121 chr4 + 190214555 102975556 102975555 102975676 121 TTATATATACATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTGAGGCTGGAGTGCAGTGGTGCAATATCGGCTCACTGCAACCTCCGCCTCCTGGGGATCAAGCGATTC chr4 + 94230402 24792617 24792616 24792730 24792617 24792616 24792730 114 TTATGTA-AGATATATATATATATATATAGG----TTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGA--GTTGATCCATCTCAATCTCAATCCCCTGGAATGCATGATATTC ....:..-.x...................x:----........x.........::.:::..x.x..x.x.xx..x.--:.:.:::..::x...:...x::.:.....::xx..x.xx.... 7M1D23M4D41M2D43M 77/114 67.5% 114/94230402 0.0% 7/114 6.1% 78182939 NA +3129 chr4 + 190214555 102977297 102977296 102977379 83 TAAAAAAAAAAAAAAAAAAACAGAAAAAAAGGAAGAAGAACAAGAGGAGCAGAGTTTTCTAGTGAGAAGATGAAGATACTTTT chr4 + 94230402 55814939 55814938 55815021 55814939 55814938 55815021 83 TAAAACAAAACAAAAAAAAACAACAAAAAGAGGAAAATTAGAAGGAAATCACAGTTGCTTGGTTAAAAGCATCAAATACTTTT .....x....x...........:x.....::.:.:..xx.x...:::.x..x....x::.:..x.:...xxxx.:........ 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 47162358 NA +3336 chr4 + 190214555 103015967 103015966 103016076 110 AAAATACAAAAAATTAGCCAGGCATGGTGTGTTGGTGTGCGCCTGTAATCCCAGCTACTCAGGAAGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033168 76033167 76033277 76033168 76033167 76033277 110 AAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..::x..x:.:.xxx.:.x...:.::::x.xx....:.x....:.:.........::::.:......x.xx.x...x.:.........:.:..x:xx:..:..:.. 110M 66/110 60.0% 110/94230402 0.0% 0/110 0.0% 26982799 NA +9272 chr4 + 190214555 103026399 103026398 103026648 250 CTTCTTCATCTTTATTTTGATGT---TCAACTTTCTGCAGAAGCCTGGGGCCCAGTAAACCAATAAGCAGACTTCCAATTGGGGCTGTGATGAGGATGGACAAAAATGCCACTGTCAACACATCCATTCCATAGTCTTCTAATTGTTTCTCTCCATGTGACCTTGCTGTGTCCAAAGCCACAGATCCTATTGCAGCCTATAAAAGTTTAAGGGT----------AAAAATGGAATCATGATAAGATAAGCACATATAAAAAAA chr4 + 94230402 62788000 62787999 62788262 62788000 62787999 62788262 263 CTTCCTCATTTTCCTCGTGTTTTGTCTGAGCTTTCTGCAAAAGTCTGGGCCCTGCCAAGCCAATAACCAAGGCTCCAATGGGAGCAGTGATCAAGATAGCCAAGAAAGCTACTGTTAGTACATCCATTCCATACTTTTCCAGTTGCTCATCCTGATGACTTCTTGCTGTATCCAGGGCAAGGGAACCTATTGCAGCCTATAGGAAAGAAAGGATCACTGAAATGAAGGAAGTAATCTTACTCAGCAAAACAGGaaaaaaaaaa ....:....:..:x.:x..x.x.---.x.:.........:...:.....x..::x:..:.......x..::x:......x..:..x.....x.:...:.x...:..x..:.....:.::..............x.:...:.:...:.:x..::x...xxx:........:....::..x.x:..x................::.:xxx....:.----------..::.x.x....x.:x.x..xx..:..x:x.x....... 23M3I188M10I39M 171/250 68.4% 263/94230402 0.0% 13/250 5.2% 40238399 NA +7583 chr4 + 190214555 103028744 103028743 103028893 150 TACCTGAACTGTGGCCTTTGGAAGCCATGCAAAAGAAATAAATATCTTTTCTTTTAAGTTAAAACCAGCAAAACACACCATCAGAAATGTAGTCAAAATTCGTATCAATACTGCAATGCCTACGGTGGCAACACAAAGGCCTGTAAGAAA chr4 + 94230402 62789185 62789184 62789334 62789185 62789184 62789334 150 TACCTGGACAGTGGCTTTGGGAATCCACGCCAGTGAGACAAATACTTTCTCCTTGAAATTAAACCCAGCAAAACACACCATCAGGAATGTCACAATGATTCGCACAGCTAGGGCAATACCTAGTGTAGCAACACAGAGCCCTGCAACAAA ......:..x.....:..x....x...:..x.:x..:.:.....::..:..:..x..:.....x....................:.....x::x.x:.....:.:x:x..xx.....:....xx..:........:..x....:..x... 150M 110/150 73.3% 150/94230402 0.0% 0/150 0.0% 40239559 NA +8392 chr4 + 190214555 103031694 103031693 103031823 130 TCTTACCTACAGTTTCTGGTCTGAGAGATGCAATAGATACCTCTGCTCCAATTAGTCCAAAAAGAAGGGGCTGAAAAATGTCCCAGGCAACTGCAATTATCTTTTCAACCTCTGCCTAAAATAACAATAA chr4 + 94230402 62789514 62789513 62789643 62789514 62789513 62789643 130 TCTTACCAACAGTTTCAGGCCTGAGAGATGTAACAGATACTTCTGCTCCAATCAATCCAAAAAGAAAAGGCTGAAAGATATTCCAAGCAACGGCAACAATTTTTTCTACTTCCTTCTGCAATAGCAATAA .......x........x..:..........:..:......:...........:.:...........::........:..:.:...:.....x....:x..:.....x..:..:x:..:x....:...... 130M 104/130 80.0% 130/94230402 0.0% 0/130 0.0% 40242180 NA +8135 chr4 + 190214555 103043290 103043289 103043433 144 ATTCACCTTTTCGCTGGTCCATCCCATGCCTGCAAGGAAAGCCATGACCAACGTGCACAGTCCTCCTGATCCAGGGAAACCAAAATGCACACTGCTGAACACAGCTAGCACAGACAACCCCAACACAAGGAATGTTCTCTTACA chr4 + 94230402 62791797 62791796 62791940 62791797 62791796 62791940 144 ATTCACCTTCTCGTCAGACCATCCCACGCCGGCAATAAAAGCTAAGACTAATGTGCAGAGCCCTCCTGATCCAGGGAAGCCAAAGTAGACGCTGCCAAAAACAGCAAACATGGACAGCCCAAGTACAAAATATGATCTCTTCCA .........:...:::.x........:...x....x:.....:.x...:..:.....x..:.................:.....:.:x..:....::..x.....x.:..::....:...x.::....::x...x......x.. 144M 108/144 75.0% 144/94230402 0.0% 0/144 0.0% 40251493 NA +11484 chr4 + 190214555 103047037 103047036 103047245 209 ACTGATTAGGTTACCTGTGGAAAAGGCTATGCCCAAGCATGTGTTGAAGCCAGTGATGGCCAGAATGTCATCGAAGCTGCCAGCTGCCATGAGCAAGGTTGGGACACCCTTCTCAACACCATAGCCTCCTCCCTGCAAAAGGAGCATTGAAGGCACCACAACAGCTGGAGATACAGCACCTAAAACAAAACTAGGCAGACAGCATTTTA chr4 + 94230402 62793693 62793692 62793901 62793693 62793692 62793901 209 ATTAACTAGCATACCAGAAGAGAAAGCCATCCCAAGGCAAGTATTGAAGCCTGTAATAGCCAGAATGTCGTCAATGCTTCCAGCTGCCATTAGCAGAGTTGGGACACCTTTCTCCACTCCATATCCCCCAGCTTGTAAGATCAGCATTGAAGGAACCACAACAGCGGGAGAGACTGCACCTAGAACAAAACTGAAAGCACAGCATTTCA .:.:.:...xx....x.x:..:..:..:..x..x.:...x..:........x..:..:...........:..:.x...x...........x....::...........:.....x..x.....x..:..xx.:..:..:.xx...........x...........x.....x..x.......:.........:::x:x.........:. 209M 159/209 76.1% 209/94230402 0.0% 0/209 0.0% 40253344 NA +3355 chr4 + 190214555 103050004 103050003 103050054 51 CTCTGTCTCAAAAAAAAAAAAAAAGGAAGAAAATGAGACCACCTTTTGAGT chr4 + 94230402 26392948 26392947 26392998 26392948 26392947 26392998 51 CTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACATTTTGGAT ....x...................::....x.....:.:...x.....::. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 76657056 NA +7715 chr4 + 190214555 103050235 103050234 103050482 248 CATACCTTTGAATCCAGACCAAGGCCAGCACGAACCAGAATGATAGACAGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTGCTTGATCTGCACATTATCGTTGATGACTGGGATATTTCTGATGAGAAACCCTGCAAGCAGCATGCCTTGAACGAAGAAATCAAACATATC-TAGTTAGTTTTC-AAATACAG----AAAATATTTTTAGTACTTTAATTTTATACAGACTACTATATAATCCCAGGAACCA chr4 + 94230402 62796712 62796711 62796962 62796712 62796711 62796962 251 CATACCTTTGGATCTAGACCAAGTCCTGCTCGGGTCAAGATAATTGAAAGAGCAATGTTCCTCAGTGCTGCAGACCAGCGCAGATTTATCTGGACGATGTCACTAACAAATGGGGTATTTCGGATGAGAAAACCAGCAAGTAGCATGCCTGAAAT---GAAAGCAAACAAACCGCAGTCAAATATCTGACTGCAGGATAAAAGTTTATCTTGCATTTTAAATACTGACACAATATGATGTATTTCCAAGAGACA ..........:...:........x..x..x..:::..::..:..x..x..:..x...:.:....:x.xx.x......x:xxx.x..x.....x..:x.:..::.:.::.x....:......x.........x..x.....:.........x:..:---....x......x.:.-:...:.:x.x..-:.x.:...----...:.x.x.:.x.:.:.....x.x:xx...x.x..:x..:..x.:...:..:x.. 155M3D15M1I12M1I8M4I55M 165/245 67.3% 251/94230402 0.0% 9/245 3.7% 40253523 NA +3179 chr4 + 190214555 103057248 103057247 103057304 57 ATATATATATATATATATATATATATACACACACACACACACATATATACACACACA chr4 + 94230402 61270779 61270778 61270835 61270779 61270778 61270835 57 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ......x.:.......:......:::..::.....x....x...:....x::..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 41786469 NA +8834 chr4 + 190214555 103057796 103057795 103057995 200 CTTACCAAGAAGAGAAGGCAGTGGAGGCAATGTAGGTAACTTAATAAGCCCCAAAAGTTTACCACCAATGATGGCACAATAGAATAGGATTATAATTCCAAATAGGTTTCCTCCAGGAAGACATTCACTGCCAGTAATTGACCAAACTACAGCCCACAGAAGAACAATGATGGTAACTGAAATAA-ACCAGGAATACTAGT chr4 + 94230402 62799087 62799086 62799287 62799087 62799086 62799287 201 CTTACCCAGAAGGGCAGGGAGGGGAGGCAGTGTTCCTATTTTAATGAGTCCAAAAATTTTACCTCCGATGACAGCAAAAAAATAAAGACACAAAATTCCAAACAGGTTTCCGCCCGGGAGACATTCAGGCCCAGTGATGGACCAAACCACAGCCCAAATGAGGACCACAGCTGAAACTGGAACAAGACAAGAAATATTAAT ......x.....:.x...x..x.......:...xxx..x:.....:..:..x....x......x..:....::...x..x.:x.x..:xx:.x.........:........x..x..:.........xxx.....:..x........:........x.x:..:..x.::::x.x.....:..:..-..x..:....:..:. 185M1I15M 144/200 72.0% 201/94230402 0.0% 1/200 0.5% 40258709 NA +3101 chr4 + 190214555 103060494 103060493 103060555 62 TTTTTGAAATCTGTTTTTTTGTTTCCTTTTGCATGTTTTTTTTGTTTGTTTTTTTTTTTTTT chr4 + 94230402 32402263 32402262 32402324 32402263 32402262 32402324 62 TTTGTGGAATTTGAAGTTTTATTGCTTTTTGTTTGTTTGTTTTGTTGGTTTGTCTTTTTTTT ...x..:...:..xxx....:..x.:.....:x.....x.......x....x.:........ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 70658231 NA +3398 chr4 + 190214555 103071178 103071177 103071216 39 TTTGATATATATATATATTTTGTTGTTGTTGTTGTTGTT chr4 + 94230402 77305225 77305224 77305263 77305225 77305224 77305263 39 TTTGATATATATATATATTTTTTTGTTGTTGTTGTTGTT .....................x................. 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% 25765953 NA +3640 chr4 + 190214555 103079701 103079700 103079766 66 ATCACAAGCTCCAGCCTCCATCAATGATGACAGGGTTACCAGTTACATAAGCAGACTGCAGTGATA chr4 + 94230402 62806668 62806667 62806733 62806668 62806667 62806733 66 ATCACAGGCTCCATCCTCCATCAATGACCACTTCGTTGCCAGTCATGTAGGCAGACTGAAATTACA ......:......x.............:x..xxx...:.....:.::..:........x.:.x.:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 40273033 NA +4858 chr4 + 190214555 103082074 103082073 103082175 102 TGCTTACTTCATCAGAAGCCAAATACACGCAGAGCATGGCTATTTCTTCTGCAGTTGCGAATCTTCCCGTCTTTTGTCTCTTCAGGAAATCATTCCGTGCCT chr4 + 94230402 62807953 62807952 62808054 62807953 62807952 62808054 102 TACTTACTTCCTCAGAGGCCAAATACACAAAGAGATGGGCCACTTCTTCAGCAGTAGCCATCCTGCCGATCCTCTGTCTGGCTAGGAAGTCTTTCAATGCCT .:........x.....:...........:x....xxx...:.:......x.....x..x.x:..x..x:..:.:.....xx::.....:..x...x:..... 102M 74/102 72.5% 102/94230402 0.0% 0/102 0.0% 40274121 NA +8522 chr4 + 190214555 103085342 103085341 103085555 214 TACTCACCTGGGCACACACAGTTGCACCTGATGCCCTGCTGGATGAAATCTGCAGCCACAGATTTTGTGAGGCCAATCACGGCTGCCTTGGTTGTGCTGTACACACATCTGTTCACAACTCCTGAGGGTGGAGGAAAGGTTCAACAATTGAAGG-------AATAAAAAATGTATTTTCCTTCAGAAAGGTAACACAAATAAGTTTTCCCAGTAGCCATTT chr4 + 94230402 62810086 62810085 62810289 62810086 62810085 62810289 204 TACTTACCGGGACATACACAGTTGCATCTGATCCCTTGTTCAATGAAATCAGCAGCCACAGACTTTGTGAGACCAATAACTGCTGCCTTGGAAGTACTATATACACATCTGTTCACAACTCCT--------AGCAGAAGGTCAGTA--TGAAGGCAGCACAGAAACAAAACAAAGTC-------AAAAGAGAACAGAGGGAAGTTTATTCAATATGCATCT ....:...x..:..:...........:.....x..:..:.x:........x...........:........:.....x..x..........xx..:..:..:.....................--------..x.:.:.x...::.--......-------:.x.x....::x.x.:-------:....:x....x.::x......x::..:..xx...:. 123M8D15M2D6M7I16M7D37M 149/197 75.6% 204/94230402 0.0% 24/197 12.2% 40275256 NA +4987 chr4 + 190214555 103086474 103086473 103086548 75 ACCCACCTTTGACGCTGGAAGCCACAGAAGACATGTTGATAATATTGCCAGATTTCTGAGCAAGCATCTGCCAAA chr4 + 94230402 62811478 62811477 62811552 62811478 62811477 62811552 75 ACTCACCTTTAATGCTGGATGCCACAGAAGACATGTTTATAATATTTCCAGATTTCTGTTTGATCATCTGCAAAA ..:.......:.:......x.................x........x...........xx::.x.......x... 75M 63/75 84.0% 75/94230402 0.0% 0/75 0.0% 40274996 NA +8595 chr4 + 190214555 103091170 103091169 103091291 122 GTCTTACTTTAGGAAGGAATGCCTTGATCATCAGGTACATGCTGCGCACATTGAGATTCATCGAGAAGTCCCAGTCTTTCTCCTCACAATCCAGGACAGTTCCATGATGGACAAAACTAGAA chr4 + 94230402 62812475 62812474 62812596 62812475 62812474 62812596 122 GCCTTACCTTAGGAAGGAATGTCTTGATCATTAGATACATGCTGCGAACGTTGAGGTTCATAGCAAAGTTCCAGTCTTCTTCCTCACAATCCAGAATGGTCCCATGATGAACAAACCTGGAA .:.....:.............:.........:..:...........x..:.....:.....x.x:....:........::..............:.::..:........:.....x..:... 122M 101/122 82.8% 122/94230402 0.0% 0/122 0.0% 40278695 NA +3702 chr4 + 190214555 103091596 103091595 103091687 92 AGGGCTAGGCATGGTAGCACACACCTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCACTTGAGCCCAGGAGTTTTAGGATGCAG chr4 + 94230402 76033188 76033187 76033277 76033188 76033187 76033277 90 AGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::x.x:..::..:.::...:--..:..:::.........x:.........x.xx.x.:.x.......:.....:..:...:..x..:.. 23M2D67M 61/90 67.8% 90/94230402 0.0% 2/90 2.2% 27058408 NA +5491 chr4 + 190214555 103095199 103095198 103095294 96 TTACCCGGGTACTTTTCCAGTTCCTGAAGTTTGGACTCATTAATGTCTGTGGCTATGACTTTGGCACCTTCTCTTGCAAAAGCCTAGTAGACACAA chr4 + 94230402 62815523 62815522 62815618 62815523 62815522 62815618 96 TTACCTGGATAAATCTCCAGTTCTTGCAGCTTAGTCTTATTGATGTCTGTAGCAATGACTTTGGCTCCTTCTTTAGCAAAAGCCTGAAGAATACAA .....:..:..xx.:........:..x..:..:.x..:...:........:..x...........x......:.x..........::x::.:.... 96M 73/96 76.0% 96/94230402 0.0% 0/96 0.0% 40279676 NA +4247 chr4 + 190214555 103096175 103096174 103096267 93 TAACTTACTAAGGCAGCTGCTTGGCCAATCCCCTGAGCAGCGGCCGTCAGGATGATGACTTTCCCATCAAGTCGACCCATAATG-GAACCTGTG chr4 + 94230402 62816762 62816761 62816855 62816762 62816761 62816855 94 TAACTCACGATAGCAGTGGCTCGTCCAATCCCTTGTGCTGCAGCAGACAGAAGTATTACTTTCCCATCAAGCCGCCCCATGCTGCCGACCTGTG .....:..x.x:....:x...:.x........:..x..x..:..x.x...:.xx..x..............:..x.....:x..-x:....... 84M1I9M 69/93 74.2% 94/94230402 0.0% 1/93 1.1% 40279413 NA +3317 chr4 + 190214555 103112305 103112304 103112381 77 TACTATATACTTATAAGTGTATATATATATACACTTATATATAAGTATATATATGTAAGTATATACACATATATACA chr4 + 94230402 56867286 56867285 56867361 56867286 56867285 56867361 76 TATTTTATACATATT-GTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACA ..:.x.....x...x-....:.:x...:......x....:.:x.:.....x.:..:.x.........x:...:.... 15M1D61M 56/76 73.7% 76/94230402 0.0% 1/76 1.3% 46245019 NA +3102 chr4 + 190214555 103113017 103113016 103113141 125 CTTATAAGTATATAAGTGTATATATATACTTATAAGTATATAAGTGTATATATATACTTATAAGTATATAAGTGTATATATAAGTGTATATATATACTTATAAGTATATGTGTATATATACTTAT chr4 + 94230402 21109172 21109171 21109296 21109172 21109171 21109296 125 CTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ..x.x..:..x:x..:.x.::x....:.:x.:.:xx.x.:.::.:....x.....::x:x:.x:....:xx.....:x....x..:.:..:x:..:...x.:x............:x...:x:.. 125M 73/125 58.4% 125/94230402 0.0% 0/125 0.0% 82003845 NA +4007 chr4 + 190214555 103116571 103116570 103116694 124 ACGTACTCCTTTTCAAATTCTTTGGCATTTTTCATTTTCTCTAGGTCTATTTTCACAAGCTTCATTTTGAGATCTTCAATTTCTTCTTTATATGGCTTAGCTCCTAAAGCAACTTTGTCCTAAA chr4 + 94230402 62826650 62826649 62826773 62826650 62826649 62826773 124 ACTTACTTCATATCAAACGAGTTTGATTGCTTCATTCTTTCCATATCACATTTTACTAATTGTGTTTTGAGCTGATCAATTTCTTCTTTGTATAACTTAGCACCTTTATCTAATTTTGCCTAAA ..x....:.x.x.....:xxx..x.xx.x:......:.:..:.x:..xxx...:..x.::.x::.......x.xx..............:...::......x...xx.x.x.x...xx...... 124M 82/124 66.1% 124/94230402 0.0% 0/124 0.0% 40289921 NA +7094 chr4 + 190214555 103132710 103132709 103132977 268 AGAAGTTATTCACTTGACAAATCCTATCATTTTCTTTCTGGATGCCATTTTTAAGCTTTTCTATATCAAAACGAGTATTTAACCACTCTTCCAAAAACTGTGTCATTTCTTTCCTATTACTTAGTACTTGTTGAAATTCAGTCTTTATGCTAGGGAACTCAC------TTTCTGAGAAATCTTTGAGAATTTCCTGTGTGAAAAATAAGCGTCAAATTGTTTAAACATTAGGAAAGTTTTGATCCAAATATTTTATTTATATATATATATATAT chr4 + 94230402 62830075 62830074 62830324 62830075 62830074 62830324 250 AGAATTTAATGACTTGTAAAAGCCTTTCATTATCCTTCTTTAACTCTTCTTTAAGTTCCTCTGTATCACAGTGGTGTCCTGAACAAGTTTCCCAGAACTGTGTTGTTTCCTTTCTAGTACTTGCTTCCTGCTGCAACTCTGCCTCGATGCTGAGAAGTTCACTCTCCATTTCCGATACATCTTTGAGGATGATCTTCAGAGAAGAGA----TCAA---GTTAAAATAT------AGTTTTG-----------TTAGGTATATATATATATGTAT ....x...x.x.....xx...x...x.....x..:....xx.xx:.x.:......:.::...:.....x.::.:xxx::.:.x..xx:....x.:........::....:..:...x.....:x.x.:..:..x..:..x.:..:x.....::.:.::....------....:..x.x.........:..xx:..x::x::..:.x.----....---...x...:..------.......-----------...xx.............:... 162M6I39M4D4M3D10M6D7M11D22M 167/244 68.4% 250/94230402 0.0% 30/244 12.3% 40302635 NA +4640 chr4 + 190214555 103140240 103140239 103140445 206 ACAAAACAACACAT-ACCTTTTTCTGTAATTCATCTTTTGATTTATCTAAATCCTTTTGAATGTCTGAAATTTGAATTGTCTTTTCTGAAATTTTTTCTCTAAGTTTATCAACAGTTTCTTTGTGTTCTTTTGATAGCA-TACGAGCAGTTTTTAGTTCCTGTTGTATTTCCAGATCCTTTATGGTTAGAAGAAATCAAGAAATGTAA chr4 + 94230402 62837332 62837331 62837535 62837332 62837331 62837535 204 ACAAAACTATATCTGACCTTCTGCTCCAGTTCAGCTGTT---TCCTTCAATGCCTCTTGTGCTTTCAAGAGTTGACTTTCTTTCTCTGAAATACTTTCTTTGAGTTCCACAATGGTCTCTTGATGTT-GTCTGATGGAGTTTTGAGCACATCTTAATTCTTTCTGCACTTCTGAATTCTTTGGACACAAAGCAGTTCAAAAAAATTAA .......x.:.:x.-.....:.x..x:.:....x..x..---.:x.::..xx...:...x::x.:::.:.x....x..x::..:........x:.....:.:....:xx...::..:....x:....-x.:....:.x:-.x:.....xx.:...:...:.x:..:.:...:::..:....:x:xx:.:.:x.:x....:...xx... 14M1I24M3D85M1D11M1I68M 124/202 61.4% 204/94230402 0.0% 6/202 3.0% 40302908 NA +3085 chr4 + 190214555 103141773 103141772 103141856 84 AATTTTCTAAATCTTTTTGCATATTTGATAGTTTATCTGTCTTCTCAGAAACAATTCCTCTGAGTTTGTCAATAGTTTCCTGCT chr4 + 94230402 77156320 77156319 77156397 77156320 77156319 77156397 78 AAATTTCTCAAGCTTTTTGCGTAGTTAATAGTTTATCTGTATCTTTAAAAGCATTTT------GTTTTTCTACCTTTTCTCACT ..x.....x..x........:..x..:.............x.::.:.:..:..x..:------....x..x.:xx....:::.. 57M6D21M 56/78 71.8% 78/94230402 0.0% 6/78 7.7% 25985453 NA +4593 chr4 + 190214555 103145824 103145823 103145954 131 CCTACTTTAGCTACAATTTCTTTTATGTTTTCTTTGAGCTGGTCACTTTCAGATTGAAGAACTTCTTGCAGCCTCTGTAGGTCATCTTTCTCCTTAGCTACAGATTTCATTTCATCATGACTTTCTTGAAG chr4 + 94230402 62841309 62841308 62841439 62841309 62841308 62841439 131 CTTACCATTGAAACAGTGTCCTTTATGTCTTCTTTGAGCTGGTCTGTCTCAGCTTGGAGAGATTCCTCTTTTTGTTTCAGGTGATCTCTTTCCTGAGTGAGAGTTTTTATTTCTTCCTGGCATCCACTAAG .:...:x.x.xx...:.x..:.......:...............xx.:....x...:...:x...:.x:xx::x:.x:....x....:.:....x..:x.x..x...:.....x..x..:.x.:.x:x... 131M 86/131 65.6% 131/94230402 0.0% 0/131 0.0% 40304515 NA +5742 chr4 + 190214555 103147351 103147350 103147613 263 CTTACTTTAGCCAAAGTTTCTCTAATATGTTCTTTCAGCTGGTCATGTTTAACTTCAAGGGCTTCTTTTATCGTTTTAAGGTTGTCTCTTTCCTTGGTTAGAGATTTTATCTCTTCCTGACTTTCTTGAAATTTTTCATT--CAACCTGAGCCTTTCCATTTCTATTCTTGCCAGTGTTGTTGAGTCCTTGGTTGTGGACTGTTCTGTTAATAACTCCAGTTCATTCATTGTTTCCTGAGTCTCACTGA---CTTCTTTCACATTAGG chr4 + 94230402 62841309 62841308 62841571 62841309 62841308 62841571 263 CTTACCATTGAAACAGTGTCCTTTATGTCTTCTTTGAGCTGGTCTGTCTCAGCTTGGAGAGATTCCTCTTTTTGTTTCAGGTGATCTCTTTCCTGAGTGAGAGTTTTTATTTCTTCCTGGCATCCACTAAGCTGCTGAAGAACTGCCTGGATCTCTGAATCCTTGGTCT--CCAATCTTGCT---TCCATAATCTTTTCTTGCTCTTTTAATTGTTCCATTTCATCTAGCTTGCGATGAGCCTGAGCAAGCTCTTCTTTTACATGAAG .....:x.x.xx.x...x..::.x..:.x......x........xxx:.:.:...x:..:.x...:.:.x.:xx...x....x:..........x:..x....x......:........:.x.:.x:x..::.x:.x.xx--.x:....:::..:.xx..:::.:x...--...:.x...:.---...x.::.:x.xxx:..:...x.....x::....x.....::.x:x.x:xx....:..x.x::.---.......:....x.:. 140M2I27M2D11M3D64M3I16M 160/258 62.0% 263/94230402 0.0% 10/258 3.9% 40306042 NA +4041 chr4 + 190214555 103153044 103153043 103153182 139 TACCATTTCAATATTTTCCTTTAGGTCAGTCTTCAATTGTTCCTTTTCTGCTATAACACTCTCTAACATTTGTTGGAGTTCATTTTTCTCCTGTATTAAAGAAAA-TATCTTCCTTTGTTGCTCAATTATCTCATTATCC chr4 + 94230402 62836304 62836303 62836442 62836304 62836303 62836442 139 TACTTTGTCCTTGCTTTCCTGACAATCAGCCTTCAACTGGTCATTTTCTGTTTTAGAGACCTCTACCATTTGCTGTAGCTCATCTTTCTCC-ACACTAAGCAAAGCTATTTTCTCAAGCTGCTGAGAAACGTCCTCATTC ...:x.x..xx.::......xxx::....:......:..x..x.......:.x..:x:x:.....x......:..x..:....:.......-::.:...:x...:-...:...::xx.:....x.:xx.:x..x.:..:. 91M1D13M1I34M 89/138 64.5% 139/94230402 0.0% 2/138 1.4% 40316740 NA +5735 chr4 + 190214555 103158298 103158297 103158846 549 ACCTTTTGCTGAAATTCA-------TCTTTAGTTTCTCCTGTATTTTCCTCCATATGCAAATTCCTGGAAACTTCCTCAGAAATTTTCGATTTTAGTGTATTAATTGTTTCTTGATGTTGTTTCAGAGACTCAAGAGCATTTCGTAATTGTTCTTGAGTATCTATATTCTTTGTTAGAAAAATA--TAAAAACAATTTCCATTAGAATATGAAACAAAATTATTTTGTAGCTACTACATAACATAATCATAAATAATAAATGATGGCCTCTGCAATGTTTTTAAGAGTCTCCAATTTTTCAAAGTTTAATCAATCAAAACCTTACCATGTTAACAGTATCGTGAATATCACTTTTGAGTTGGTCCCTCTCAATTTGCAAGCTTTCTTGGAGTTG--TTTTAG-------ATCATCTTTTTCTTGAGTTAAAGTTTTTACTTCTTCTAAAGTTTGCTGCAGTTTCTCAGTAATCAGTGTTTTCTCCCTTTCTACAGTTTGCAGCGTAGAATCTCTATTTTCTAATTGTTCCTTCAGCTGTTCCATCTCATTTAGTCTTTCTTGAACCT chr4 + 94230402 62837347 62837346 62837834 62837347 62837346 62837834 488 ACCTTCTGCTCCAGTTCAGCTGTTTCCTTCAATGCCTCTTGTGCTTTC----AAGAGTTGACTTT------CTTTCTCTGAAATACTTTCTTTGAGTTCCACAATGGTCTCTTGATGTTGTCTGATGGAGTTTTGAGCACATCTTAATTCTTTCTGCACTTCTGAATTCTTTGGACACAAAGCAGTTCAAAAAAATTAAAGCTTGAGCAT---------------------CATTTCAAAAAATTATGACAGAAGATTACTAAAGACTT------TGCCTTAAAGG---------------------AATAGAACAGTTTCTTACCATGCTAATTGCTTCCTCTACAGTGTTTCTCAGATGGTCTCTCTCATTTTGGAGATTCTCC---AGTTGCATTTTAAAATCATCATCATCTCTTTCT---GTCATGGTGCTCATTTC-TCGACAGTC--ATGCAATTTTGGAATAAGATCTGTTTGTTCCACTTTTTCAGATTCCCTGTTAAATTCACT------------TGCCTTCATTTCCTCCATTTCATGCAGTTTCTTTTTTGCCT .....:....xx.:....-------:...:.:.x:...:...::....----.x:x.:x:.:.::------...:...x.....x:.:xx...x...x:xx:...x..:............:.x.x:..x.:xx.....:x..x.....x..::..x::x...:x........xxx:x...::.--.x....x....xxx::.x..::..---------------------:.:.x..x..x..x..x.:.:.x:..x.x.:.x.:.:.------..::..x...:---------------------...x:.x..:xx:.........:...:x.:x..x.xx.:.x:::..:.x..x.....:......x....x.:::.:..:---.....--.....:-------.......:.....---..:.x:..x:.:.:...-..x.x...:--x....:...:xx.:...xxxx.....x:...x:..:.x...x..x.xxxx..:.x..x..------------.x......x:.x:.....:....x:...:.:.:..xx:... 18M7I23M4D13M6D113M2I24M21D38M6D11M21D79M3D5M2I6M7I13M3D17M1D9M2D60M12D41M 294/470 62.6% 488/94230402 0.0% 97/470 20.6% 40320951 NA +6770 chr4 + 190214555 103158599 103158598 103158952 354 CAATCAAAAC-CTTACCATGTTAACAGTATCGTGAATATCACTTTTGAGTTGGTCCCTCTCAATTTGCAAGCTTTCTTGGAGTTGTTTTAGATCATCTTTTTCTTGAGTTAAAGTTTTTACTTCTT-CTAAAGTTTGCTGCAGTTTCTCAGTAATCAGTGTTTTCTCCCTTTCTACAGTTTGCAGCGTAGAATCTCTATTTTCTAATTGTTCCTTCAGCTGTTCCATCTCATTTAGTCTTTCTTGAACCT------------------CACG---------------------TGTTTTCTCCTGAAGTTCTTGGGTCTTGTAAGAAAGCTTTAA---AAAAGAAAAAGTAAATGTCACAC---AGTAAAAGCAGAGCAGTCTGAGGCATA-----CATATATACA chr4 + 94230402 62841298 62841297 62841702 62841298 62841297 62841702 405 CAGTCAGAATTCTTACCATTGAAACAGTGTCCTTTATGTCTTCTTTGAGCTGGTCTGTCTCAGCTTGGAGAGATTCCTCTTTTTGTTTCAGGTGATCTCTTTCCTGAGTGAGAGTTTTTATTTCTTCCTGGCATCCACTA-AGCTGCTGAAGAACTGCCTGGATCTCTGAATCCTTGGTCTCCAATCTTGCTTCCATAATCTTTTCTTGCTCTTTTAATTGTTCCATTTCATCTAGCTTGCGATGAGCCTGAGCAAGCTCTTCTTTTACATGAAGATGATGTTCGTGCTCTGCTGTCTTTTCTTCCAATTCTTTCATTTTATTAGAGAGCTTTAATTTAAAAGGAAAAGGAATAAACACTCTCAATCTCATGTAAAACAGTATAatatatatattgtatatataca ..:...:..:-........xxx......:..x.xx..:..x::......:.....:x.....::...x.::xx...:.xxxx......:..:.x....:....:.....x.:........:.....-..::x:.:::..:-..:.x..x.:x..:::x:xxxx....:xxx..:x::..:.x..::x.x.xx..:x..x.:.:.xx...:..:..:.::........:....:...::.x:xx...:...------------------..:.---------------------...:..:..:.xx.:.....xx:.:..:.x...:........---.....:.....x..xx:x...x.---.x:xx.x.:.:.:....x.:.x::...-----:......... 10M1I115M1I13M1D109M18I4M21I42M3I23M3I27M5I10M 222/353 62.9% 405/94230402 0.0% 53/353 15.0% 40317301 NA +9065 chr4 + 190214555 103158979 103158978 103159343 365 AGCATTTCTCAAAATA--GCATCTTGTACCAACCTCGGTCTTCAAAGCACCCAAACTCGAATCAAATTTTTGGGCTTCTTTAGAGAGATTAACTATTTCCTGATTCATTCTCTCATTCTCCTCAAGGACCATCTTATACTTTTGCTCAAAGTCCATATGAAGGGTTTTGAAATTTTGGAATTCTTGATCAGTGCTTTTATAATTCGACTGTGTAGTTGCTAGGTCATCTTTTGTTTTCCCAATTTCTTCAAGTAAACCTTGAACTCTACTCTCCTTATGAACTACTTCAGAAAACAATTTATCTTTTTCTGATGTTATTATATGGAGCTCTTCAGATTTGTCTTGTATCTATGGAAAAGAAATAAAA chr4 + 94230402 62842406 62842405 62842772 62842406 62842405 62842772 367 AGCATATGTCAAAAAGAGGAATATGACACCAACCTCTAATTTCACATAATCCAAAGCTGTTTTAGACTCTTCTGCATCTTTAGACAAATGTTCTATTTGGAGCTTCATTTGTTCAGAGTTTTCTGACACAGCTAGGTATTTTTGTTCTAGCTCTTCATGGAGCTGCTTAAGAGCTACATATTCCTGATTAGAGTTTATATATTTAAGCTGTGCATCTGCTAGCTCTTTTTTTGATTTTTCAATTTCTTCAGTCACAGAGTTAAGTTTAACTTCATTATCAGCTGCTTCAGAGAGCAGCTTTTCTCTTTCCAACTTTAGTAAGCTTAACTCCTCGTGTTTTTCAAGAATCTGTCAGAAAAAAAGAAAA .....x.x......x:--.x..x.x::.........x:x:....x.xx.:.....x::.xx.:.:.:.:..xx..x........x.:..xxx......xxx.x......:x:...xxx.::..x::x..x:::xx:..:.....:..x.:x..:x:...:..xxx:..:.:.x:.xx:x....:....:..x.:..x....x..x::.....:.x:......x..x.:.....x...::...........:x:.x.xxx.x..x.:..x::..x....x.:..:.......:.:..::..x...:....::.:x...x..x::xx.:...:..:x:...x..xx.x....:.x::...:...x.... 16M2I349M 221/365 60.5% 367/94230402 0.0% 2/365 0.5% 40316573 NA +8013 chr4 + 190214555 103160618 103160617 103161338 721 TGTTTACCTCTTTCCTCAGCCTTTCTACTTCAGAAGGTAAAGATTTCAATTCTGAAAGCAAAATGACTTCTTCCCGCAAAGCTTCATTTTCTTCAACTTCTTTATTTAGTTCTTTCTGAAGATCAGTAATCTTTCCTTCCAATTCCAAATTACAGAGCAAATCTAGA--------AAGTTTTGGT----AAATTGTATAAAGATCCAATGTTGCCAAACAGGTAATTTAATTTTTAATTGTCCTTGAATCACCTTTTTCAGGATCAGGTAAAGTTTATTTGAAAAATAATCCCTTA-----------------------------TGATTTGA--------AAC--------------------------------------CCATGGAAATCTTTATAAATATTAATACCAAATGAAAC---TAAAACGTAATATTGA----------------GTTTTTAAAAAGT-------CAGAGTATAATG----------------------AATTTTTAATCATTGAAATATGCTT-------------GTCAAATTGTTTAGGTACATTTCT--------------------AGAAGAAGTCAGATTTGAAAAAAGATGT------TTAAAATTACAAAATACCTTTTGGAACTTTGCCATCTATAAGGGAGGTGAGTTTTGTTATCTCATTAAAAGCAGATTGTAATTCTTTCTCCAGATCAACTTGCATTTT------------CTTTTTTGCCTCCAACTGGCTTTGATATAACTGAATATCATTTTCCATTTGCTTGTATGTAGTTGCAAGTTCTTTCTATTGAGAAAAACATTGCAAATGCACAAAAATACACTGATCAT--------TACAA--CTACTTTATTA-----TAAATATTACA--AAAAATACTTACCATT chr4 + 94230402 62844155 62844154 62845049 62844155 62844154 62845049 895 TGTTTACCTCTCTCTGCTGCATTTCAACAGTATTTGGTAGAGACTGAAGTTCTGATAGCTCATTTACTTTTTTTTGTAGGAGTACATTCTCCTCCAATGCTTTTTCTAGTTCTGCTTTTAAGTCAGATGCCTTTTTTTCCAGGTCCAGAAGAGAAACCAAGTCTACACGATCATCAAGTTTAAATGAAAAGAGTGTAAGAGAAAAAAA------AAAAAAGGT--TTTAA--TTTAAGCAGTTTTATATCA---TGCTCTGGAT---GTCAAGTCTATACAAAAGACTATTTTGTAATTTGTCAGCAATCAGAAGATGGAACTACTGCTTTGAGCTTGGTCAACACTTGGTTAGATCGGCATTCCGTTTATTTCCACTTTCTCCCTGATATCCTTCATTAATTTGACTGTCTTAGGTGACATACAAAGCATTATGGTAACTGCAGTTTTACAAATATTTTAAGAAAGTGCTATTGCAGAGTGCTGTGTGCCATCAGTATCAGAGATCCCGATATTTTATC-TTGACAAACACTTCAGTGAGAAAAGAGCAAAAAATCTTCCCTACATCCCCCACCTCAAATGGAGAAAAGAAAAAAAAGGAAGGGGAGAAGAAAAAAATCATCAACTTAAACAGAATAGTACCTTTTGGAACTTTACCCTCCATCAGTAAATTTAGCCTTGTGTTTTCTTGAAATACAGACTGCAACTCCTTCTGCAAGTCAGCTTGCATTTTTTTGTAGTTCGCCTTTCCTGCTTCTATTTGGCTTTGGTAAAGTTGCACATCCTTTTGCATTTGTTTGTGATTATTTAAGAGTTCATTC--TTCAGGAAAACA----------AAAAAAACATGCTGTTCATACACAAAATACAAGTCTACTTGCTTAACAGTTAATTATTAAATCAGACACACTTCCTGTT ...........:..:x.x..x....x..xx:.xxx....:...:.xx.:......x...xx.x.x....:..:::.:.:::x.x....:..:..x.x.x....x.:.......x::.xx.::....xx::....::.....:x....:.xx.x.:.x...:....x.--------......x::.----.:.x....x:.::.xxx..------x...x....--.....--.....x::x::..:x....---.x:..x....---..x....:...x::...:.:x..:::x..-----------------------------..x.....--------...--------------------------------------..x..:x.x:...:..x...x.x.x.::.xx.x.x:..---:...:.:.x..:x.:.----------------:....x.:.....-------......::x:..----------------------:..x...x...-....x.x.::...-------------.:x...xxx:..xxx.....::.:--------------------.:..:...xx..:xxx...:...:.x:.------:.x...:x:x.x.:................:..x..:..x..x:.:x.x..::....xx.:..x.x...x:....:..:..:..:....x..::...:..........------------....::...:..:.x:........:..x.::..x.:...x....x......:....:xx..x..:x:.....x...--..x..:......----------.x.....:.::...x....--------.....--......xx...-----...x.....x.--.:.x.:....x.::.. 167M8I10M4I19M6D9M2D5M2D19M3D10M3D29M29I8M8I3M38I38M3I16M16I13M7I12M22I11M1D13M13I24M20I28M6I108M12I76M2D12M10D19M8I5M2I11M5I11M2I16M 456/692 65.9% 895/94230402 0.0% 232/692 33.5% 40316463 NA +6275 chr4 + 190214555 103161319 103161318 103161451 133 TACAAAAAATACTTACCATTTTCTCCTTCAGCTCCAGATTTTCACTTCTAAGAAAGGCTGATTCTCTCTTGGCATCAAGGGCTACAGTTTCAGCATCAAACAGAGTCTGCTTCATTTGTTTTGGGTCTTCAAT chr4 + 94230402 62845519 62845518 62845651 62845519 62845518 62845651 133 TGTAAAAAGTAATTACCATCTGCTCCTTCAATTCCAAATTTTCTGTTCTGAGAAAAGCAGATTCTTTCTTGGCATCCAAGGCTACAGTTTCACTGTCTAAGAGGGATTTACTCAGCTGCTGAATTTCCTCGAT .::.....:..x.......:.x........::....:......xx....:.....:..x......:..........x.:.............x::..x..x..:.x:.xx:...x:..:.xx:xx..:..:.. 133M 95/133 71.4% 133/94230402 0.0% 0/133 0.0% 40315800 NA +5756 chr4 + 190214555 103163110 103163109 103163570 461 ACACAACAAAATACGCCTGATTTTTACCAATGAGTATGACAAGTCCATTTTTATATTTTCTAGCTTTTGAGAGTCT---ATGTATTCCTGTAGCTTCTTAATCTGGTCTTCCTTTTCTCTAAGCAGCTCTACTTTTGAACTGAGTTCATTCTAAAAG----AATCAAAGGAGAGAGTAACAATTTAGAATCTGATTTGAAGTCTAAGGGATTAAAACAGAACTTATATATATTAGTTTAAATTCATAGTAAAATTC----AAAGTC--------------ACTAATATTTTAAAAACATAATTCCCTTATTTCTGACATCAT--------GTTCAGTTACATATGTTGCATGTTTTATAGTT-------CTAATTGCTTATCAATAGAAATACCAA--CATGAA-------------TGCTCACCTCAAGATCTTGATTATATACTTCTGCATGCTTAACTAAATTCTTTAAGTTCGAAATTTCATGAATTAGTTGCATCTGTAAGAGCATGTGAA chr4 + 94230402 62845996 62845995 62846485 62845996 62845995 62846485 490 ACCCAGCAGAAAACTCATG---TTTACCACTGAAAGAGACATATCCTTTTTTTCCACATCCACTTTCTGTAGTTCTTCCACTCGATTTTGTAATATCTTTATTTTGTCCTCTTTCTCTTTTAGTTGTTCCAGTTTGGACTTTATTTCTATCTAAAAGTTACATGaaaagaagaaagtaaaaa---------------aaaaattaaaaaaaaaaaaCGCAGTTTCCA---GTTTGTTTGTTTTCCTGATAGGAATCTGTAAGAGTCCTTTTTACATAAGCATTAAGATT----AGACATATCTACCTCATAACTGGTAAGACTAACCAGAGCCCAGCCAAGTCTGAGTCATCCGTACCAGATAGAAAAACCAAACTATGTTCCATACAAATCTTACTTCATGCAAGTTTAGGAGACAGGCTCACCTCAAGTTCTTCATTGTAGGCTTCAGCATTTGAAATAATATTCTTTAGGTTGGTAATTTCATGCATTAGTTGTATCTGT-GGAGCAAATGGA ..x..:..:..x..x.x..---.......x...:x:x....x:...x.....x:xx:x..:.x:..:..x::x...---.:x::x.::....::x....x..:.x...:..:..:...:.x..:x.:..:.x...x..x:.x.x...xx........----.xxx....:...:.....x..---------------:..:x:...:::.xx.....:x.::..x:.---:..x....:xx...x.::..::.x..----.:....--------------.:...x...----.:.....x:.x...:..xx...::.xx.:--------.::...::.x:.x..xxx...x:x.xx:..x.-------.:..x:xx.xx..x...x....x::.x--....x.-------------x............x....x...:..x:....x....x:xx..:x.x........:...x.x.........x........:......-:.....x:..:. 19M3D54M3I78M4I21M15D30M3D26M4I6M14I9M4D29M8I32M7I27M2I6M13I86M1D12M 276/435 63.4% 490/94230402 0.0% 81/435 18.6% 40317114 NA +6877 chr4 + 190214555 103174731 103174730 103174958 228 CTTACCTCTTGATCTTTTTTAGTTTTTCTTTCTAGAGCCTCAAATTCATCCAAATCATTCTTTTCTTTTAATTTCAATTCCATTTCTTCTTTTTCTGTTCGTAGTTGTTCATAGTCTAATACCAGATTATCATAGTCAGCACGAAGTGAGTTCAACTCACTTTCTATATTCTCCTATTATAAACAAGAACAGATTTTCCAATCAGAAAATTCAAATATT--TTTTGTTTC chr4 + 94230402 62848129 62848128 62848357 62848129 62848128 62848357 229 CTTACCTCATGATCTCTTTGTGTTTGTTTTTCCAGTGCTTCAAATTCATCCATTTCTATCTTTTCCTTCAGTTTCTCCTTCATTTCATTTATTTCTGATTTCAACTGTTCATTTTCTAATACTAACTTATTAAAGTTATCTTGCAAAATATTGATCTCATTTACAGCAATATCCTG-AAGAAAGAAACACAAGTGTTAGAAAAAGGTTATTGGAATTTCCATCTTATTTC ........x......:...xx....x.:....:..x..:.............xx..xx.......:..:.:....xx:.:......x.:.x......x.:x:.::.......xx........:.:x....:.x...:.x.x:.x.:x:x:..x.x....:..x.x::.x.x....:-x.x...x..:x...::.x..xx..xx..:xx...x:...x.:--.:..:.... 176M1D42M2I9M 150/227 66.1% 229/94230402 0.0% 3/227 1.3% 40326602 NA +8285 chr4 + 190214555 103180300 103180299 103181515 1216 TTTAATTTTACCTTTAATTCCTGTTGCAACGTGAGGGAAGAAGAGGTCACCAGCATCCGTGTTAAGTTTTCAATTTTCTCATTCTGTACTTTCTGAAGCAAATCTTTTTCTTCCAAAAGTTGGGCCAATTGGTCTTTTTCCATTGCCTGAGCCCGCGTCTCTAAAGAAACCT---ATAGAATGCAATATTGGATTATGTTAATAATAAATGTGGCTAAGTTTTAAAACCTTAAA--GTAGCATAAAAGAATAAAATATTAAATTTGTATATGAACTATAAGAATTTTAATTTCACTGA----AATAAAATATACTCTAACTGTAGAACACCAAAATGCAGTTACCATAATCAATAATTTCTCAG---ACTTACAATAAAATACACATTTCTTCTCATGTAACTATTCTATATACCATGTAT----------AAGACACCAA-----TGCTGTTAA------------TATAACTCTATTAATTGCCTAAGAAGATATGAATAGTCAGA--AGTCATAAAACAAAGACTTGAATTCTGATAGTAAAGATAGAGATGTTCT------CATAAGATTACCATTTGATATTTTAGCTCATTTTAAAA-----AAGATCCTTAATGCGTGATTTTTTACAAAATATGGGACCATGATGGTTAAAACAAACTAAAATGATAAGTAATTATGCTATATTATTAGA--TTGCTATCTAAGGGTTAGAAGAGGAAT--TCAGGATA-ACATGA---AAACACAGAAGGTGGTTCTAAGTAACTCTGTAGTTTCTCTTTTTAATCGAATTCATATGTATTTGTGAAAAATTTTAAGAAATGTCTCTACTTGGCCCATTTGATAATCTCAGATTTTGCCCGTTGAAAATAAAAAACAA------AATCTAAAATAATTTCAAGAACCAAATCTTACAATTTATAG-TAAATTAAACTAAAATTTTTATGAGTGGATTTCTTCTTCTTTAAAAGTG---ATTAAAAACCTAAGTTGTAGCAACTCAGATATTCAGGAATGAAGAGTCTCTGAGCATTTGGGCAGGTCTCCATTCTAAATTGGTTCTTTCAATTTAATGAAATAAATGATTCATA---CATACCTCCTCTAATTGTTTTTTAAGATCCATTATTTCTTTTCTATACCTTTTCAGGAGAGCTTCATCAGTTGATACCTCATTAACATAAGGAGTATTCTTCATATATTTAGCAGTACTGGCAAACTGGAAAAAAAATACGAAAGTGCTAAGTGTTCAACACTTAAAAAAATTCGAA-TTTAATT chr4 + 94230402 62852517 62852516 62853618 62852517 62852516 62853618 1102 TCTGCTCTTACTTTAGCATTCTGTTTCGATGAGAATGAGGCAGAAGTCACCAGCATCTCAGTTAAGTTTCGTATCCTATCCTCCTGCATTTTTTGAAGAGAATTCTTTTCTTCCAATAGGTGAGCCAGCTGATGTTTTTCCATTGCATGTATCTGAGTCTTCATAGACACCTTCCATAAAA-ACAATAATAAATCATGATGACATTAAGTGTATC-----------ACCTGAAACAGTAGTTTTTAATAAT----TACCAGGATTGAGAGGTAACAGCATGTACATATACTTCTTTAAGTCTAAAAGAGTTGTCTCTAATCTTTGA----CAAAA---ACTGACAACAGTCTACAATTTCCCAGGAGACTCAAAATATAATGAGCAAATC--CTTAGGTGGCGGTTTTTACTGCAATTTTTTTTTTAGAGAAAAACACTGACTTTTTATTTTTAAACATTTTTTTCCTCTGACTTCCCTCAGTCCCAAAAAAATAAGGCATCTTTGGATGAGTTATGTAATCAAAAC---AAT----ATATGCCACATTGTGATTTTTTTTTTTCCCTGTGCTTTTTATTTTGTGATCTAATCTCTTACAACACTTGCAAGACTCTCA-----------TCAACAAAATA-----CTATATTTTTTTGGACAAAGTTGAACT-TGAGGGACAATGTTGTTTGGTGGGAAGTTGCTACTGTCCACTTGCAAAATGGATGTTCAGCCTATATGTGATATAGACGTTGCCAGTGGTTTTACACAGTT--GCAGCTT----------------------------------------------------------------------ATTGCAGCTTTGGC----TGAACATCAGTTACGAGGGGGGAAACAAACATAA----AAGTACATACACATACATTTTACAGATACAGTACACTACATACTCTGT------ATACACTACACTTTATATATGCACACTATAAAA---------AGAAACACAAATGT-------------GTCCATATACACGTGTATA-----------------------------TTTATGTAATAAATACATTAAAATTCATACTTCCTCCAGTTGCTTCTTCAAATCTAGAATTTCTTTGCGATACCTCTTCAGCAAGGCATCATCATCAAGTACTTCGTTGACTTTTGGAGTGTTCTTCATTCTTTTAGCTGTGTTGGCAAACTGGAAGAGCA--ACCATATTCTCTCATGTACAATAGTTAAATAAATCAAAAGTGTAATT .:.:x.:....:..x:xx.:.....x.:.:.x..:x..:.x...:............:xx.........:xx..::.x..x.:...:.:...:.....x:...::...........x..x..:....::..:.x............x..x::.:.x....::.x...x....---...:..-:.....x.::..:...x.:.:.x...:...:x.-----------....x...--....:x.xx..x...----..::.::x...x:x:xx...x::.x.x.:x.xx.:...x:.:.----..x.:.:.xxx......::x.x..----.....---.x.x..x.:.:..x.:......:...---...:.x....x...:x:..xx..--..:.x..::.x:..:.xxx.:.x..x.x.----------..:....::.-----.::.x....------------.x.:...::x:.x.x.x..x..:..:xx.x.x..xx.::..--...:..:x..:x..:..---...----...xxxx.x..x.x...x..:.------.x.:x.x..x::....x:.:x.:..::::x..x:..x.-----....::..:.-----------.:x........-----.:..:x.xx..x::.....x.x:..:x-.:..x:.:x...:.:.x.x:.x:..--......::xxxx:x..:x..:.x.:..--....xx..-.::...---.:..::x.xx:......:..x::.::.--.:..:..----------------------------------------------------------------------..:x...x...x..----....x..x.:xx..:.------..x.x..x....----...x..xx.xx.x....x....:..-..x.x..x....x.xx:.:.:.------..x:x:.x:x.....x.x:..---.:..x...x---------..x...x..:..:.-------------...:x.:x:..:x..x::.-----------------------------..x...x.......:xx.:.x.---.....:.....:.:...:..:..x.:...:.xx........x.x......:.....x.::..x......x:x::...:..:..:..x.xx.....:........x:x......x..::.............:.:x.--..x.x.x.x::xx:...x...:.x.....x....:x:..-.x..... 172M3I6M1D33M11D8M2I15M4D43M4I24M4D5M3D26M3I23M2D29M10I10M5I9M12I41M2I17M3D3M4D22M6I38M5I10M11D11M5D27M1D25M2I27M2I8M1I6M3I27M2D7M70D14M4D16M6I12M4D25M1I22M6D21M3I9M9D14M13D19M29D22M3I136M2D39M1I7M 649/1028 63.1% 1102/94230402 0.0% 262/1028 25.5% 40327783 NA +12673 chr4 + 190214555 103182758 103182757 103183320 563 TCACCTGGAGAGCAGTAAGTGTTTCATCAAAAGATACTGGAGTAATTGTGCAGATAATACGTGTCTTTGCATTTCCTCCCAAGGAATTCTGGAGAATTCGTGTTAACTTGCTATCTCGATAATTTATGAAACCACTTAGCAAGGAATAAGTTTACAGGAGAAAAAGATTGAGAACGTTTATATAATAAAGTAGTTGGTTTTTAATGCAGAACTCTTAAATCAGCCAGAGTTTCAAAAATTAGTTTACAAGTTATATGAGGCAGATTAAAACTACTAAAAAATATTTAAAACAGAAAGTAAATTCAGTAGATTATAAT--CATATGTATAAGTTTTTGAATATATGGAAGAAATCAGTACATTTGAGTGTCATCGAAATGTTGCAATGTTCAACCTAATGAAAAATATAAGAATCAGTAGGTAAGTGCACAACGGGATAAACTTACCCAACTTGTCCATCACTAAGTTTCTTGATCACTTGTCCCAAAATAAATAAGCTTCGATTTATATTACAGCCTTCCTTGAGCCGCACACCTG----------AATTTATTAAACAAATATGAAAACTAAAC chr4 + 94230402 62854070 62854069 62854523 62854070 62854069 62854523 454 TTACCTGGAGGGTGCTGAGCGTCTCATCAAAAGAAACAGGAGTTATTGTGCAAATAATAACTGTCTTTGCATTTCCTCCCAGGGAGTTCTGCAAAATTCGAGTCAGCTTGCAGTCTCTGTAATTTATGAAACTGGT-----GGGAAAATG-----AGAAGAAAGAAAATGAAGAAATATATATTACTGTATGG----------------------AAAAGCAAATACATTTTCTAA----AGGTGACAGATCATTTG------------------AAAGAGTAATCAATACAAAATATAATTTTAACAAATTAAAGTGCTTTATGTATGATTTATTAA------------------------TGACTGATCTCAAAA---------------------------------------CAGGTATGT---CAACAGAAC-AGCTTACCTGGATGGGTCATCACAAAGTTTTTTGATAACTTGACCCAGAATGAACAAGCTTCGGTTTATATTGCAGCCCTCCTTCAGTCGGACACCTGGGCATCACACAATGTTTTAGTGAAAAAAAAAAACAACAC .:........:.::x.:..:..:...........x..x.....x........:......xx....................:...:.....x.:......x..:.:.....x:....x:.............::x.-----:....x.x.-----..:.....:.:.x...::.x:.x.....x.:x:x:.:.----------------------x...x..:x:.x.x....x..----..x.x...::.:..x..------------------...:.:..x.:..x...:..x:...x..:.::.:....x.:.--:x.......:.x..x..:.------------------------...x..x:x..:...---------------------------------------:.....x..---....:.:.:-.:......:::x.x.x:......x......:.....x.....x....:...:..:........:........:.....:.....x..:..x.......----------...x.x...:xx...x.x:.....x.x.. 136M5D9M5D38M22D21M4D17M18D42M2I19M24D15M39D9M3D9M1D98M10I29M 319/442 72.2% 454/94230402 0.0% 133/442 30.1% 40328688 NA +3705 chr4 + 190214555 103185170 103185169 103185246 77 TGGTGCATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAGCCCAGGAGGTGGAGGTTGCA chr4 + 94230402 76033202 76033201 76033276 76033202 76033201 76033276 75 TGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .......:..--...:.:...........::........x.x..x...x::.....:.....:..x.xx:..:..:. 10M2D65M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 27151968 NA +4036 chr4 + 190214555 103185806 103185805 103185906 101 TTACCTGCAGCGCCTGTTTGAGCAGCTCTTTCACTGCCTGCAAGATCAACCAAATTCTGTAAGATAGAT-----AAAAATAAATCCTTAGGGCAGATAATTTGAAA chr4 + 94230402 62855292 62855291 62855397 62855292 62855291 62855397 106 TCACCCTCAGATCCTGTTTGACTAGCTCTTTCACTACCGGCCAGATCTACCAAATTCTGCAAATTAAATGTATCACAGGTTAGTTCTGGGTGTAATTTATTTTAAA .:...:x...xx.........x:............:..x..x.....x...........:..:x..:..-----.x.::.x.:.:..x:.x.:.:x.x....x... 69M5I32M 72/101 71.3% 106/94230402 0.0% 5/101 5.0% 40330514 NA +9691 chr4 + 190214555 103194218 103194217 103194733 516 TTAATAC----TCACCAAATGGGATACCTTAACAGATCCTTCACAATTAGA------AGGTTCACCCTTCTCTCTGCTTTCCAAAATCTAGATAGAAAAGGCAAGCTGTAGAAAAATTAGTG-CATTCTTACT--TGGAAAGATCTAACAGATAGATAG--AATTACCTACCATCCTAAAGATGGTATGAGAACGACTGCTTCTTTGATTCATTTTTGTTTCTCCATAATGCCTGCTCTCTGTAAAAATGAGTTATATTTCAGCTGCATATATAATAAAATCCATAGAAACACAATAATTTTTATTTTAACTTAAAAAAGTATGATTTGAGGTCCAAACGTGCTTGATTGAAAAGAT-------AGTTTTTACAAGT----GTTCTAAAGAAATACA-------GCAT------AAAGTCTTACTTTCTCCCTTTGTAATCCATTTCAAAGCCATTTCTGATGTATATACAACTTCTTCTGTGAGATCAGCAACATACACATTCCTCTGAAACAAGTTTAATTATGG----AAAGATTAGAGAAATAGAAGTCACAAGT chr4 + 94230402 62856198 62856197 62856706 62856198 62856197 62856706 509 TTAATACCATCTTACCAAATGGGACACCATCACTGCTCCATCACAGTTTGCGTTTGCAGGGTCACTCCGTTCTCTGCTTTCAATTATCTAGAAGAGGGAAACAAG--------AAGTTACTGTCATTTAAAGTAATAAAAAAACCCAGCATTCTCATAGTGAAGTTTTTACCATTCTGAAGATGGTATGAGAACGGCTGCTATGTTCGTTCATTTTTGTTTCTCCGTAGTGGCGATTTTCTGTCAAAA-AAGCGATATT---------------------------GAAATAC-----TTCTGTTTATATTCTAAAAAA-------CTGATTTCTGAATAAGATT--TTGAAGAGACATCCACAATTCTATACAATTTAACGCTTTTCTAGAATACACCAGCTGGCATTGGCTAAACAACTTACTTTCTCCTTTTCTGATCCACTCCATAACTTGTTCTGGAGAAACAACCACCTCTTCAATCAGGTCTTCGACATATGTATTTCTCTTAAAAGAAACAAACAATGACAACAACAACAAGAAAAAAAACAGTAATAAAT .......----.:...........:...x.x..x.x...x.....:..x.x------...x....:.:x:...........x.xx.......x:::::.::....--------..:...x..-....:xx.x.--.::...:.:.:.:..xx:xx....--..x.x::......:..:.................:.....x:x..x:.................:..:..x.x::.:.....x....-:..:x.....---------------------------....:..-----..:.xx..x..x::.......-------:...xx..::..::x.x..--.....:...:-------.x.:.x.....x.----.:.:.xxx::......-------....------..x:x............:...x.:.....:.:..x.:.:xx.....:x.x.xxx..x..:.....x:.x..:..xx.:.....:::...:....x...x:.:x:x..:x...:----..x:.:x...:...x.:x...x.:..:. 7M4I40M6I48M8D9M1I10M2I24M2I87M1D10M27D7M5D21M7D19M2D10M7I13M4I16M7I4M6I113M4I28M 317/466 68.0% 509/94230402 0.0% 93/466 20.0% 40338020 NA +7250 chr4 + 190214555 103195106 103195105 103195259 154 CTACTCACATTGACATCTTCTCGAATAATTAAAGGTTTCATTTTTTGAGTGCCACAGAGTAAATCTGTAATGGTTTCATTGTATATTTCCATGTAAGATACACGTAAGAGAAATTCCCTATCAGGAAACTA------GAAGAAAAAAAATTATATAAAAA chr4 + 94230402 62857602 62857601 62857761 62857602 62857601 62857761 160 CTACTTACATTCACATCCTCACGAATTCCTAGAGGTTTTTTTTTCCTTATATTGCAAAGCAAATCTGTAATGGTTTCATTGTAGATTTCCATGTAGGAAACTCTTAATAAGAATTCTCTATCTGGAATCTAATGATCATAGATAGAAAAAAAAATAAAAA .....:.....x.....:..x.....xx:..:......:x....::xx:.::::..:..:.......................x...........:..x..x.x...x.::.....:.....x....x...------:x...x.:....xx.x....... 131M6I23M 115/154 74.7% 160/94230402 0.0% 6/154 3.9% 40337504 NA +7932 chr4 + 190214555 103195896 103195895 103196322 427 TAGAAATCCAGTT-----AAGTTACTTACCTTCTTAATTTTTTGGAAAATGTCATGAATTGCCCTGGGTATAACTCCCAAATGATCTTCTGAACCCATCATGGTATATGTTTTTCCTGAAGCAGTCTGTCCATAGGCAAATATAGTACCTGCAAAAAACAAAACACACATACGCAAAGATTAAAAACAAACCTATAATGGGTAAAACTATGCATGCTTGTTGCACAGACGCCCAAGACTAAAATGTTTCTGCAGCATTGAG--------TGAATACAAACCATTGTAGCCTTGTATGGCAGAATCGATGATTGGTGCTGCTATTTCTTCATACACATTTTTGGTAGTTTCATTACCATGAAAGACACGATCTAAACAACAACAACAACAACAACAACACAGAAGTTAAATCAAATGAGTCCACTGTGTTTTCATTCCAAA chr4 + 94230402 62858071 62858070 62858440 62858071 62858070 62858440 370 TAAAACCTCAGTTTCATAGAGACACTCACCTCACAAATAATTTTGAAGACGTGTTGAATTGCCTTAGGAATAATGCCCAGGGAATCTTTGTTTCCCATCATCGTGTATGTCTTCCCTGAGGCAGTTTGACCATAGGCAAAGATTGTGCCTAGGAA----------------------------------------GATGGTTACATTT-----TGTTGATTATTTAGAAGTT--ACATTACAA-------GCAGGAGTTAGGTGCAATTTTAAGACTTACCATTGTAACCTTGCACAGCTGATTGTATAATTGGCACAGCTACATCTTCATATACTTGCTGAGTGTTGTCACAAGAGTGAAAGACACGATCTTAAACACAA----------------AAAGAAAAGAAAGCACATTAGTGCATTGCATTGCAAGTCAAAA ..:..x::.....-----:..x:...:....:x:x...xx...x...:.:..xx.........:.:..x....:x....::x:.....:xxxx........x..:.....:..:.....:.....:..x...........x..x..:...:x:..----------------------------------------:....x..x.x:.-----..:.x:..::x:...x.::--.x.:..x..-------....x.x.x..--------.x..x..xx.........:.....:.::..x..x.xx..:.....::.x....:x........:..x.x:.x:..:x.x...:x.xx:...............x..xx....----------------.x....:xx...x..x..x...x..:..::..x:x.x..x... 13M5I137M40D13M5D19M2D9M7D11M8I112M16D43M 239/357 66.9% 370/94230402 0.0% 83/357 23.2% 40337825 NA +4154 chr4 + 190214555 103198259 103198258 103198321 63 CCTACCTGCTGTTCAGCGGCCGCACTCGCACGCAGACGGCCACGGCTCCTTCCTCCGCCATCC chr4 + 94230402 62860085 62860084 62860147 62860085 62860084 62860147 63 CTCACCTGGCGATGAGCGGCCGTACGCGCACGCAGACCGTCACGGCCCCCTCCTCCGCCATCC .::.....x:.x.x........:..x...........x.:......:..:............. 63M 51/63 81.0% 63/94230402 0.0% 0/63 0.0% 40338174 NA +3232 chr4 + 190214555 103199363 103199362 103199434 72 ATTTTCCCTTTCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTAAATAAACATGAGTTCTTGCTTTGT chr4 + 94230402 6554015 6554014 6554086 6554015 6554014 6554086 72 ATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACTGAAGTTCCCTTTTTGT ....x::x..:::.............:...............xx.xx:....x..xx:.....::x:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 96645348 93569207 +3160 chr4 + 190214555 103199366 103199365 103199405 40 TTCCCTTTCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847278 45847277 45847317 45847278 45847277 45847317 40 TTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..x.....:x.............................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 57352088 NA +3045 chr4 + 190214555 103200527 103200526 103200610 84 AGAAAAA----TCTCAGTCTCTCTCTCTCTCTCTCTACACACACACACACACACACACACACACACACACACACACACACATAATGTA chr4 + 94230402 28492640 28492639 28492727 28492640 28492639 28492727 88 AGAAAAGGACTTCTCTGTTGCTCTCTCTCCCTCTATACATTGGCATACACACAAACACCTGCCTATGGATGCATACGTGCATACTGCA ......:----....x..:x.........:....x....:xx:..:.......x....x::.x:.::x.::..:..:::....x..:. 7M4I77M 56/84 66.7% 88/94230402 0.0% 4/84 4.8% 74707887 NA +3648 chr4 + 190214555 103257319 103257318 103257418 100 TCTGTAATAACAT--TATTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372008 57372007 57372109 57372008 57372007 57372109 102 TCTGTAAGAACATGCTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .......x.....--.:x:.:.......::..x.::.:x..:.:...:..:::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 13M2I87M 67/100 67.0% 102/94230402 0.0% 2/100 2.0% 45885311 NA +3253 chr4 + 190214555 103257329 103257328 103257439 111 CATTATTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCATCTA chr4 + 94230402 50176313 50176312 50176420 50176313 50176312 50176420 108 CATTGTTCTTTCTGTTCTTTGT---ATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATA ....:..::..::x......x.---x...x..:..x...............:xxxx.::x.:.:.::x:......x::.:...::.........:::::x..::...:x.. 22M3D86M 67/108 62.0% 108/94230402 0.0% 3/108 2.8% 53081016 NA +3128 chr4 + 190214555 103257334 103257333 103257414 81 TTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .......::..x.::..x....:...:::::.:.xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 45885305 NA +3188 chr4 + 190214555 103257344 103257343 103257426 83 TCTTTCTTTCCTTCTTTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......:...x.::..x.:..:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 45885317 NA +3213 chr4 + 190214555 103257356 103257355 103257436 81 TCTTTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC-----TTTCTCAT chr4 + 94230402 57372027 57372026 57372112 57372027 57372026 57372112 86 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCAT .:...........x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x.:-----........ 73M5I8M 56/81 69.1% 86/94230402 0.0% 5/81 6.2% 45885329 NA +3410 chr4 + 190214555 103275023 103275022 103275078 56 AATAAAAAAACAAAAACAAAAACAAAAAAA-CAAAGCAAAACAAAACAAAAAAAACA chr4 + 94230402 36318903 36318902 36318959 36318903 36318902 36318959 57 AATAAGGAACCAAATACAAAGACAAAAAAACCAAACCAAACCAAAACAAAAAAAGCA .....::..x....x.....:.........-....x....x.............:.. 30M1I26M 48/56 85.7% 57/94230402 0.0% 1/56 1.8% 66956120 NA +3077 chr4 + 190214555 103288829 103288828 103288871 43 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTAACATTTA chr4 + 94230402 94183535 94183534 94183577 94183535 94183534 94183577 43 TTTTAAAAAAAAGAAAGAAAAGGAAAAAAAAAGCTAATATTTA .:.:........:...:....::..............:..... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 9105294 NA +3447 chr4 + 190214555 103302379 103302378 103302457 79 GTGGCGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......:.........::::........x.xx.x...x..........::.:.:x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 27269178 NA +3154 chr4 + 190214555 103335623 103335622 103335727 105 TACTGCCATCTCACTGTATGCTCGCATGACCTTTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTT chr4 + 94230402 44130893 44130892 44130997 44130893 44130892 44130997 105 TGCTTCCACTTATTTCTGCTCTCATATGACCTCTTTTCTGTCCTTCTTACTCTCTCCTTTCTGCTGCTAATTTTAACCACATTTCAGTTTTTTTCTCTCATTTTT .:..x...::.xx:.x.::x...::.......:......x..:.....x.......:..::.x..x::xx.:.:xx:.x.x:..:xx...:.....:..x..:.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 59204730 NA +3714 chr4 + 190214555 103335648 103335647 103335841 194 ATGACCTTTTTTCTTTCTTTCTTTCTC----TCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTTCTTTTTC chr4 + 94230402 19215357 19215356 19215557 19215357 19215356 19215557 201 ATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTC--TCTTGACTTTTTTCTGCCTTATATTTTTCTATCC ....x:x..::x.....x.::...xx.----....::.xx:x.:.x.xx:.:.:.:...:.:::.:::.:...:...:...xx....-----......x..::...x......xxx....x.x..::::xx:......:.x.......:x..x.....:xxxx.:..--..:.xx...::....x:...x.x....::.x.:. 27M4I56M5I75M2D34M 115/192 59.9% 201/94230402 0.0% 11/192 5.7% 84120291 NA +4253 chr4 + 190214555 103335651 103335650 103335800 150 ACCTTTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCT chr4 + 94230402 50176277 50176276 50176425 50176277 50176276 50176425 149 ACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGT-TCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCT ..:x:.:.:.......:....x..:x:.:x::...x:x.:x:...:...x.-.....x.x...x..:..x::.............:xxxx.::x.:.:.::x:......x::.:...::..........:.:.x....:.x:x:x..... 51M1D98M 91/149 61.1% 149/94230402 0.0% 1/149 0.7% 53159374 NA +3454 chr4 + 190214555 103335657 103335656 103335750 94 TTTCTTTCTTT-CTTTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x..:-.:x...:.x.......xx.:.:..:...:.....:..x...xx:...x.::..x:x.:.....x.....::..::.:...... 11M1I83M 63/94 67.0% 95/94230402 0.0% 1/94 1.1% 20008723 NA +3464 chr4 + 190214555 103335662 103335661 103335754 93 TTCTTTCTTTCTCTCTCTTT--CTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x.:x.....--......xx.:.:..:...:........x..:xx:...x.::..x:x.:.....x.....::..::.:...... 20M2I73M 63/93 67.7% 95/94230402 0.0% 2/93 2.2% 20008728 NA +3342 chr4 + 190214555 103335686 103335685 103335833 148 CTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTT-----CCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTT chr4 + 94230402 19215408 19215407 19215560 19215408 19215407 19215560 153 CCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCT .:.:.:::.:.:.:.:..:...:....:..xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.....:x::x.....-----.:.::.:.xx..::..:..x....x:x.:.....x.::.:. 107M5I41M 85/148 57.4% 153/94230402 0.0% 5/148 3.4% 84120278 NA +3323 chr4 + 190214555 103335692 103335691 103335808 117 CTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTT chr4 + 94230402 63697117 63697116 63697233 63697117 63697116 63697233 117 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT ..:.x.::.....:..:::xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.......:..:...:::...::..:::.:.. 117M 67/117 57.3% 117/94230402 0.0% 0/117 0.0% 39638575 NA +3762 chr4 + 190214555 103335696 103335695 103335823 128 CTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT-----CTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x.::..:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx.......-----..:.....::.:...:.......::.x:.. 93M5D30M 77/123 62.6% 123/94230402 0.0% 5/123 4.1% 39638579 NA +3636 chr4 + 190214555 103335704 103335703 103335830 127 CTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTT--TTCACAGTCTTTCTCTCCCCTCTT--TTCTTTCTTCCTTTTTATTT ....x..::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....--...x.xx..:...:.....::...--...:...:.:....:.x... 79M2D24M2D20M 79/123 64.2% 123/94230402 0.0% 4/123 3.3% 39638587 NA +3392 chr4 + 190214555 103335708 103335707 103335834 127 CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCA--CAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT ....x:.::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::..x....:..x--.xx..::..:....--...:::...:.....:......x... 83M2D14M2D26M 77/123 62.6% 123/94230402 0.0% 4/123 3.3% 39638591 NA +3567 chr4 + 190214555 103335713 103335712 103335838 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx:::.:x:.::...x.xx:..:::..:::...:::.........::.....x... 13M3D110M 75/123 61.0% 123/94230402 0.0% 3/123 2.4% 39638596 NA +3388 chr4 + 190214555 103335721 103335720 103335849 129 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTTCTTT-TTCGAGATGAA chr4 + 94230402 63697117 63697116 63697247 63697117 63697116 63697247 131 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAA ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx...:.x....xxx....:x:.:::..x.xx::.:::..:::...::.......:..::.:...-..::...x... 13M1I105M1I11M 78/129 60.5% 131/94230402 0.0% 2/129 1.6% 39638604 NA +3012 chr4 + 190214555 103380858 103380857 103380920 63 GACTCCTGTCACAGATTTGCAAGACAAAAAAAAAAAAAAAAAAAAAAAAGATGAAAAGAAATA chr4 + 94230402 58547115 58547114 58547177 58547115 58547114 58547177 63 GAATCCTGTGACAGAAATGCTTTACAAAAAAAAAAAAAAAAAAAGGAAGGGGGGGAAGCACTA ..x......x.....xx...xxx.....................::..:.:x.::...x.x.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 44833743 NA +3260 chr4 + 190214555 103442265 103442264 103442325 61 TCTTTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCCTCCTTCCCCCTTCTCCTCTTCCC chr4 + 94230402 7218318 7218317 7218376 7218318 7218317 7218376 59 TTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCC--ATTCTCTTCCC .:....::..:...::x.....:..:.......::.......:.....--x.:........ 48M2D11M 45/59 76.3% 59/94230402 0.0% 2/59 3.4% 96223947 93990608 +3437 chr4 + 190214555 103480843 103480842 103480888 46 AATATATTTATATCTATCTATCTATATATACATATATATACATATA chr4 + 94230402 73677982 73677981 73678027 73677982 73677981 73678027 46 AATATATCTATATCTATCTATCTATACATACATATAAATGCAAATA .......:..................:.........x..:..x... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 29802861 NA +3226 chr4 + 190214555 103480941 103480940 103480983 43 ACATTATATATATATATATATATATAATGTGTGTGTGTATATA chr4 + 94230402 22934828 22934827 22934870 22934828 22934827 22934870 43 ATACTATATACATACATATATATATAGTGTGTGTGTGCATATA .:.:......:...:...........:..........:..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 80546113 NA +3008 chr4 + 190214555 103484825 103484824 103484866 42 AAATTAGCTGCAGTTTGTTTTTTTGTTTTTGTTTTTTTTTTT chr4 + 94230402 6503290 6503289 6503331 6503290 6503289 6503331 42 AAATAAGCAGAAGTTTGTTTTTTTGTTTTTGTTTTTTTCTCT ....x...x.x...........................:.:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 96981535 93233020 +3767 chr4 + 190214555 103523483 103523482 103523687 205 TTTTTCCGTAGTGGCTGCACCATTTTACATTCCCATCAACAGTGTATAAGAGTTACAATTTCTCCACATCCTCAACAACACTTAATT--TTCTTTCTTTTCTTCTTTCTTTCTCTTTCTT-----TCTTTTCTTTCTTTCTCTCTCTCTTTC-TTTCTTT-CTCTATCTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTATTTCT chr4 + 94230402 85792657 85792656 85792863 85792657 85792656 85792863 207 TCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTT-----TTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCT--CCTCTTTGATGTTTCT .:...:.x....xx:::........:.:x.:x:.x.x.::x..x.x.-----..x.xx.:...xx..x.x...xx.:x..:.x..x.--.:x....x:.......:...x:..:....:.-----.x....::x.x...:::....xxx...-.....:.-....::...x..xx.:..........:.:.:....--....:..xx.:..... 47M5D35M2I31M5I27M1I7M1I35M2D16M 128/198 64.6% 207/94230402 0.0% 16/198 8.1% 17730826 NA +3502 chr4 + 190214555 103523548 103523547 103523677 130 ACATCCTCAACAACACTTAATTTTCTTTCTTTTCTTCTTTCTTTCTCTTTCTTT----CTTTTCTTTCTTTCTC--TCTCTCTTTCTTTCTTTCTCTATCTCCTTCCTTCCT-TCCCTCCTT--CCTTCCTTCCCTCCT chr4 + 94230402 89201201 89201200 89201339 89201201 89201200 89201339 139 ACCTTTCCAGCAGCTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTCTCCT ..x.:::..:..:.x..:.xx:..:.xx..x..:......:::.:.:....:..----..x.x....::..x.:--:......::....:...:.::..x:...........-..:.:x...--.x.:..x.::..... 54M4I16M2I36M1I9M2I15M 85/130 65.4% 139/94230402 0.0% 9/130 6.9% 14322347 NA +3062 chr4 + 190214555 103534985 103534984 103535050 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCCAGAGAATGGCGTGAATTCAGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:x::........x..x.x...xx:.x....::...... 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 27501784 NA +3602 chr4 + 190214555 103577185 103577184 103577308 124 CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x:..:..:x:xx.::..:::.:.::.....:...:........:.x.:. 13M1D110M 75/123 61.0% 123/94230402 0.0% 1/123 0.8% 39880068 NA +3349 chr4 + 190214555 103577189 103577188 103577312 124 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx:....x:....::x:xx.::..:::.:.::..:..:...:...:....:.x.:. 13M1D110M 73/123 59.3% 123/94230402 0.0% 1/123 0.8% 39880072 NA +3698 chr4 + 190214555 103577195 103577194 103577365 171 TTCTCTTTC--------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCT---------TTCTTTCTTTTCTTTCTTTT--TCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 63998066 63998065 63998256 63998066 63998065 63998256 191 TTCTCTTTCAGAGAAACTTTTCTTTTTGATTTCTTTTTCACATCCTTCAGTTCATCTCATTCACAGTAAACATACTACCTATGATTGCCTTGAACTTTTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTT .........--------...::..:..xx.......:.:x.x.:...:xx...-.:..x...x---------.x..x:..x.xx..x.:..x--::....:..:::....:x.x...:.........x..x..:........xx:.:.:....x..:...x::.:..:x::.:..xx:::.x.:..x.... 9M8I36M1I9M9I20M2I97M 109/171 63.7% 191/94230402 0.0% 20/171 11.7% 39579129 NA +3734 chr4 + 190214555 103577199 103577198 103577316 118 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTT---CTTTTTCTTTCTTTCTTTCTTTCTTTCCT-TCCTTCCTTTCTTTCTTTCTCCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x::..---.:...x....:.:x.xx.......:...:-..:..:.......:....:.x:.. 13M1I52M3I29M1I24M 80/118 67.8% 123/94230402 0.0% 5/118 4.2% 39880082 NA +3573 chr4 + 190214555 103577207 103577206 103577316 110 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTT---TCTTTCTTTCTT-----TCTTTC-CTTCCTTCCTTTCTTTCTTTCTCCTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:..:::xx.x.:..:::..:...:::..x.....::x....xx.....x....---:....x:..:..-----......-..:..:..:..........:..::.. 66M3I12M5I6M1I26M 75/110 68.2% 119/94230402 0.0% 9/110 8.2% 39880090 NA +4074 chr4 + 190214555 103577212 103577211 103577437 226 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTT--------------CTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC--------------TTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCT--------------------------TTCTTTCTATCTT----CTTTTTGGAGTTTCACTCTTG---------TTGCCCAGGCTGG chr4 + 94230402 67728277 67728276 67728569 67728277 67728276 67728569 293 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCTGGAGCTTCACCCATGAAAGTTGGATTGCAAAGGCTGG .....x:..x....:....xx:.::..:x.......x.x...x:x::.....:....:.::.x:x:.:....:x:x..:..:...x..:x...x.--------------.....:..x..:::.x.::.xx.:...:.:..x.:.::...--------------.:.xx....:....xx:.:....:...::x..:x:..::.:..--------------------------...:..x..:..:----.:.::.....:.....:.x..---------....xx....... 95M14I41M14I43M26I13M4I21M9I13M 142/226 62.8% 293/94230402 0.0% 67/226 29.6% 35848935 NA +3868 chr4 + 190214555 103577224 103577223 103577407 184 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTT---TCTTTCTTTCT-TTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTATCTTCTTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT----------------------------TCTTTCTCCTCCATTCTTCACATATCCCTT .....x...:x..x:::.:.......:....x.::x.::x.....---.:x........-......x.x.:.x.::..x::............:.xxxx.::x.:....:x:..:...x::......:..----------------------------.......::.:.x.....:x:..x.:.:.. 45M3I11M1I70M28D30M 102/156 65.4% 160/94230402 0.0% 32/156 20.5% 53400957 NA +3166 chr4 + 190214555 103577237 103577236 103577316 80 TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCT--TCCTTCCTTTCTTTCTTTCTCCTT chr4 + 94230402 76521921 76521920 76522002 76521921 76521920 76522002 82 TCCTTTCTTTCTCCCCTTCTTACCTTACTTGTTCTTGGTCTCTCTCTTCCTGCCTTTGTTCTGCTTATCACTCTCTCTGCTT .:..........::.:.....x:...x...x.....xx.:...:....:..x:.:.--.:..x.:.x..x:...:...x... 56M2I24M 56/80 70.0% 82/94230402 0.0% 2/80 2.5% 27055316 NA +3190 chr4 + 190214555 103577252 103577251 103577405 154 TTTCTTTTCTTTCTTTTTCTTTCTTTC-TTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTC---------------TTTCTATCTTCT chr4 + 94230402 68840790 68840789 68840958 68840790 68840789 68840958 169 TTTGTCTTCTGTATTTTTCCACATTTCATTTGTTTCTTTCCTTA-TTCATTTGCTCTTTTTGCTTTCCCACCCAATCCATGTGATATCACTCCTCAGTTGCTGTCCACCCACTTCCATTTTTCTTCTTCTTTGCTCTTCTATCATACATCATTGCAGTTTTCAATCTTCT ...x.:....x.x......:x:x....-...x...........x-...x...x:.::...:x.:.....x:..xx:..x:x.xx:x..x:....:xx..x..x:.:x..:x.:.::x...:.:.::......x:.:....x..---------------....x....... 27M1I16M1D98M15I12M 98/153 64.1% 169/94230402 0.0% 17/153 11.1% 34736462 NA +3115 chr4 + 190214555 103577340 103577339 103577396 57 TTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 86518998 86518997 86519054 86518998 86518997 86519054 57 TTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTT ...:.:...:...::...x:...xx..:.......:...:...........x::... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 17058342 NA +3482 chr4 + 190214555 103581746 103581745 103581824 79 GTGGCGTATGCTTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGGATCACTCAAGCCCAGGAATTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.--......:.......:...::........x:xx.x.:.x....::.:.....:.::..x:.....:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 27548545 NA +3081 chr4 + 190214555 103602460 103602459 103602527 68 TCTGCTTTTTAGAGTTTCCAGTTTTTCTGCTCTTTTTTTTTTTTCCCATCTTTGTGGTTTTATCCACC chr4 + 94230402 2740442 2740441 2740507 2740442 2740441 2740507 66 TCTGTTTTT--GGGTTTTTTTTTTTTTTGCTCTATTTATTTTTTTCTATTTCTATGATTTTATTTATC ....:....--.:....::xx.....:......x...x......:.:..:.:.:..:......::.:. 9M2D57M 48/66 72.7% 66/94230402 0.0% 2/66 3.0% 100862018 89352537 +3134 chr4 + 190214555 103604798 103604797 103604857 60 ACTGGTCATTAGAGAGATAATAATTCTTTTTTTTTTCTTTTTATTATTATACTTTAAGTT chr4 + 94230402 29508511 29508510 29508570 29508511 29508510 29508570 60 ACTGCACAGTAAAGTGATTATGATTCTTTTTTTTTTCTTTTTTTTCTAATTTTTCAAGTT ....xx..x..:..x...x..:....................x..x.x..x:..:..... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 74096287 NA +3021 chr4 + 190214555 103624984 103624983 103625036 53 AAAGGTAGAGAGGGAGAAGAAAAGAGAGAAGGAGATTAAAAAAGAGAGAAACA chr4 + 94230402 80001669 80001668 80001721 80001669 80001668 80001721 53 AAAGGCAGAGAGGGAAAAAAAAAGAAAAGAAAAAATTTAGATAGAAAAAAACA .....:.........:..:......:.::.::.:...x.:.x...:.:..... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 23623315 NA +3777 chr4 + 190214555 103629837 103629836 103629928 92 ATCCTAAGCAAAACAAAAAAAAAACAAAAAAAAAACAAAAAAAACAACAACAACAACAAAAAAAAACAAAGCTGGAGGCATCACGCTACTTG chr4 + 94230402 5616875 5616874 5616966 5616875 5616874 5616966 92 ATCTTAAGAAAAAAAAGCAAAAAACAAACAACAACCACCCCCAAAAACAACAGCAACAACAAAAAACATTGCTAGATGTCTCTCTGTACTTG ...:....x....x..:x..........x..x..x..xxxxx..x.......:......x........xx...:..x.:x..x.xx...... 92M 67/92 72.8% 92/94230402 0.0% 0/92 0.0% 98012962 92201593 +3015 chr4 + 190214555 103629846 103629845 103629889 44 AAAACAAAAAAAAAACAAAAAAAAAACAAAAAAAACAACAACAA chr4 + 94230402 47452245 47452244 47452288 47452245 47452244 47452288 44 AAAACAAAATAACAACAAAAAAAAAACCAATAAAACCACAACAA .........x..x..............x..x.....x....... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 56177601 NA +3210 chr4 + 190214555 103629848 103629847 103629902 55 AACAAAAAAAAAACAAAAAAAAAACAAAAAAAACAACAACAACAACAAAAAAAAA chr4 + 94230402 65996261 65996260 65996315 65996261 65996260 65996315 55 AACATAGAGAAAACAAAACAAAAGCAAAACAAACGACAACAAAAACACTAGAAAA ....x.:.:.........x....:.....x....:.......x....xx.:.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 37633587 NA +3580 chr4 + 190214555 103640795 103640794 103640883 89 TATGTGTGGCCCAAGACAATTCTTTTTCTTCCAGTGTGGCACAGGGAAGCCAAAGGATTGGACACCCCTGCTCTATAGATTGTTTTCTT chr4 + 94230402 43915637 43915636 43915725 43915637 43915636 43915725 89 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATGTGCTTTACAATTAATTCTT ...:.....:......:....::.....x::x.:....x.x...:x...x....:.x.....::...x..:x..x..x.x.xxx..... 89M 61/89 68.5% 89/94230402 0.0% 0/89 0.0% 59725158 NA +3528 chr4 + 190214555 103650562 103650561 103650730 169 ATAAATATATAAAATAAATTTAATAAAATAAAATTTATATAAAATATATAAATA-TATTATATATAAATATATAATATATATTTAATATATATAAATATATATAAATAAATATATATTATATCATATATAATATATATTTATATAT-------ATAAATATATATAAATAAATATAT chr4 + 94230402 32046737 32046736 32046907 32046737 32046736 32046907 171 ATAAAAGTACAAATTATAATTATATTATTGAACATCATGTA---TGTATACACACTATTATGTA---ATATATAATATATGTATAATGCATATAAATTCTAACAAATGTATTTGTGTAATATCTAAGAAATTGAACAGTTGTATCTGGAAGTGATAAATGCATAGAGTTGGATTTAT .....x:..:...x..x.x...xxxx.x.:..xx.:..:..---.:....x.:.-......:..---.............:.x....::........x:xx.:....:x..x.:.:.x.....xx.x.x.x.:x.:.x..:...x.-------......::...x.:x.::..x... 41M3D10M1I9M3D79M7I24M 109/163 66.9% 171/94230402 0.0% 14/163 8.6% 71603825 NA +3853 chr4 + 190214555 103667123 103667122 103667200 78 TGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.--....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 9M2D67M 58/76 76.3% 76/94230402 0.0% 2/76 2.6% 27633921 NA +3026 chr4 + 190214555 103668719 103668718 103668792 74 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAAGTGGAGGGTACAGA chr4 + 94230402 76033205 76033204 76033278 76033205 76033204 76033278 74 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA .....x....:.:.........::::........x.xx.x...x::.......:.:.:.:x.xx:..x.::... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 27635514 NA +3850 chr4 + 190214555 103680458 103680457 103680608 151 CAGATTAAGTGATATATATATATATATATACATACATACACACACACACACACACATATATATATACACATATATATACATATATATACA---------CATATATATATCACTTAATATATATATTTCT--CATTATTGTCAAG-TGAAAATGCAATAAGAA chr4 + 94230402 54005675 54005674 54005837 54005675 54005674 54005837 163 CAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTAATTCTGACAAAGCTGTTAGGAGGAAAATGTAAAAAAAA ..:....x:.x:x.:.:....:...x....:...................x.x.:x.:.x:xxx.:....x.x.xx.......:....x:---------:...:..:.:::.x..x:.:.:.x..x....--..xx::...:.:.-x.......:..x..:.. 90M9I31M2I13M1I17M 99/151 65.6% 163/94230402 0.0% 12/151 7.9% 49674783 NA +3199 chr4 + 190214555 103680471 103680470 103680527 57 ATATATATATATATATACATACATACACACACACACACACACATATATATATACACA chr4 + 94230402 61270779 61270778 61270835 61270779 61270778 61270835 57 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ......x.:.......::...:.::...::.....x....x...:....x:...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 42409692 NA +3141 chr4 + 190214555 103680492 103680491 103680591 100 CATACACACACACACACACACATATATATATACACATATATA--TACATATATATACACATATATATATCACTTAATATATATATTTCTCATTATTGTCAAG chr4 + 94230402 29286191 29286190 29286292 29286191 29286190 29286292 102 CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGTTAAGATCATCCAG ....:...:....:..x.x:......:.x...x.x.x...:.--:x..:.x.....:......x.:....xx..x...::...x.x.x.:.xx..::..x.. 42M2I58M 67/100 67.0% 102/94230402 0.0% 2/100 2.0% 74394301 NA +3203 chr4 + 190214555 103680502 103680501 103680554 53 CACACACACACATATATATATACACATATATATACATATATATACACATATAT chr4 + 94230402 74526077 74526076 74526129 74526077 74526076 74526129 53 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ............:..:x.:.......x........:.......::.:x..x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 29154425 NA +3030 chr4 + 190214555 103691082 103691081 103691135 54 CTATACAACCCAACAATCTCACTCCTATTTTCTTGCCCTAGAGAAATGAAAACT chr4 + 94230402 28060149 28060148 28060202 28060149 28060148 28060202 54 CTACTCAATCTGGCAATCACACTTCTATTTTCTTGCTCTAGCAAACTGAACACT ...:x...:.:::.....x....:............:....x:..x....x... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 75630933 NA +3022 chr4 + 190214555 103704100 103704099 103704149 50 TCTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGGA chr4 + 94230402 21345700 21345699 21345749 21345700 21345699 21345749 50 TCCCACACCAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGACAAGA ..:....xx.:.........:..........:....:....::..x.:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 82358400 NA +3304 chr4 + 190214555 103704112 103704111 103704156 45 AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGGAAATTGGT chr4 + 94230402 2216136 2216135 2216180 2216136 2216135 2216180 45 AAAAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAAATTGGT ....:....:.:.:..:.....:.........:............ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 101487976 88726579 +3054 chr4 + 190214555 103721275 103721274 103721320 46 TTTGTACATATTCTGCTTTTTCCTTTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 56311864 56311863 56311909 56311864 56311863 56311909 46 TTTGGACATATGCTGATTTCTTCTGTTCTTTTTTTTTTTTTTTTCT ....x......x...x...:.:..x...................:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 47409411 NA +3292 chr4 + 190214555 103732592 103732591 103732692 101 ATATATACGTATATATGTACTATATATACGTATATATGCACGTATATATGCACGTAT--ATATGCACGTATATATGCATATATATGCACGTATATATGTGTAT chr4 + 94230402 25672279 25672278 25672379 25672279 25672278 25672379 101 ATATATATGTATATATGG--CATAAAGAGAAAAATGTGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT .......:.........x--:...x.x.x:x.x..:..:.:..:x:.:.:x.:x..:--........:....:.:......::....x:..:.::..:..:.. 18M2D37M2I44M 66/99 66.7% 101/94230402 0.0% 4/99 4.0% 78060313 NA +3131 chr4 + 190214555 103732623 103732622 103732690 68 ATATATGCACGTATATATGCACGTATATATGCACGTATATATGCATATATATGCACGTATATATGTGT chr4 + 94230402 40730008 40730007 40730075 40730008 40730007 40730075 68 ACATTTGAAAGTACATATGCAGATATATATGCACTCACACATGCACACGTATGTGCCTCTGCGTGTGT .:..x..x.x...:.......x:...........x:.:.:.....:.::....::.x.x.:::..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 63002615 NA +3540 chr4 + 190214555 103732658 103732657 103732732 75 TATATATGCATATATATGCACGTATATATGTGTATATATGCACGT-----ATATATGCACATATATATGCCCGTATATAT chr4 + 94230402 74437266 74437265 74437345 74437266 74437265 74437345 80 TATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGTTGTACTTGTATGCATCTAGATATGGACCTAGATGT ........:.:............x:..x.........:....:..-----x.:......:x..x.....xx.x..x..:. 45M5I30M 58/75 77.3% 80/94230402 0.0% 5/75 6.7% 29295392 NA +3013 chr4 + 190214555 103732907 103732906 103732957 51 AAAAAAAAAAAGAAAAAGAAAAAAGAAAGAAAAAGAAAACAAAATAGATAA chr4 + 94230402 32321852 32321851 32321902 32321852 32321851 32321902 51 AAAAGAAAGAAGAAAAACAAAGATGAAAGATTAAGAAAACAAAATGTGTAA ....:...:........x...:.x......xx.............:x:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 71411055 NA +3174 chr4 + 190214555 103734705 103734704 103734785 81 GGGTAAAACAGGATGAAACAAACAAACAAAAAAAACACCAATAATTTCTAAAATGTCAACAAAATGGAAAATAAAAGATAA chr4 + 94230402 73441380 73441379 73441460 73441380 73441379 73441460 81 GGGGAAAAAAAAGCAAAACAAACAAACAAAAAAAAAAACAGGAACTTTTAAATTTTAAACATAGTTTAGGCTAGAAAAGAA ...x....x.:::::....................x.x..:x..:..:....x.x.x....x.:.xx.::x..:..:.x.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 30293325 NA +3053 chr4 + 190214555 103746468 103746467 103746514 47 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTA chr4 + 94230402 84631336 84631335 84631382 84631336 84631335 84631382 47 TTTGTCTTTTTTGTTTTATTTTAATTTTGTGTGTGTGTGTGTGTATA ...x.:......x....x....xx....................:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 19115132 NA +3012 chr4 + 190214555 103746469 103746468 103746512 44 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG chr4 + 94230402 42975002 42975001 42975045 42975002 42975001 42975045 44 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTG ...........:........xx...x..x:.............. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 60771467 NA +3186 chr4 + 190214555 103746471 103746470 103746515 45 TTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAA chr4 + 94230402 42975002 42975001 42975046 42975002 42975001 42975046 45 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGA ...........:........xx......x:.............:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 60771469 NA +3091 chr4 + 190214555 103746473 103746472 103746520 48 TTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAAAGCTC chr4 + 94230402 87978968 87978967 87979015 87978968 87978967 87979015 48 TTTTTTTCTTTCTTTTTTTCCTTGTGTGTGTGTGTGTCTATCAGTCTC .......:...:.......::................x.:.x.:x... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 15767505 NA +3075 chr4 + 190214555 103746479 103746478 103746511 33 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGT chr4 + 94230402 17835962 17835961 17835994 17835962 17835961 17835994 33 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 85910517 NA +3113 chr4 + 190214555 103746481 103746480 103746548 68 TTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAAAGCTCTGGGTAACACTGTAGCTTCGAAGGTAAA chr4 + 94230402 17835962 17835961 17836029 17835962 17835961 17836029 68 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTAAGCTGGTGAGTGTCTCCCAGGCTGGAAGGGCAAA ...............x...................:x:xx..:..:x.x.:xx:...xx:.:..:... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 85910519 NA +3095 chr4 + 190214555 103796718 103796717 103796775 58 AGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAACAGAGAGACAGATAGATAGATAA chr4 + 94230402 22672124 22672123 22672181 22672124 22672123 22672181 58 AAAGAGAGAAAGGGAGACAGAGAGGAAGAAGAAAACTGCGTGAAATATAGAAAGATAA .:.......:..:....x......:....:::....x.x.x..x.x.....x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 81124594 NA +3096 chr4 + 190214555 103834550 103834549 103834619 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 27801353 NA +3279 chr4 + 190214555 103834869 103834868 103834947 79 GTGGCACACGCCTGTAATCCCAGCGACTCAGGACGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--....:.:.....x...::::.x......x.xx.x...x.:..............x:xx:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 27801668 NA +3207 chr4 + 190214555 103837729 103837728 103837781 53 TCAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAACAAAACCAAATAAGCTCCA chr4 + 94230402 63862826 63862825 63862878 63862826 63862825 63862878 53 TCAAAAAACAAAACAACAACAACAAATAAGCAAACAAAACCAAACATGCTCCA ........x....x..x..x......x..:x.............:.x...... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 39974903 NA +3443 chr4 + 190214555 103838924 103838923 103838975 52 TCCCTCCCCCAGTTCCTTATAGGCTGAGTATTATGGGGTCACAATCTTCCTG chr4 + 94230402 13421609 13421608 13421660 13421609 13421608 13421660 52 TTCCTCCCCTGGTTCCTCATTGGCTGAGTACTTCAGGTTCACAATCTTCCTG .:.......::......:..x.........:.x::..x.............. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 90417315 NA +3477 chr4 + 190214555 103891894 103891893 103891972 79 GTGGTGCTCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTCAGGAGAATCACTTGAATGCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x..--....:.:...........::........:.xx.x...x........:x.:.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 27858693 NA +3100 chr4 + 190214555 103947751 103947750 103947800 50 TTTTTGGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTCCTGCTTCTAGGA chr4 + 94230402 24144951 24144950 24145000 24144951 24144950 24145000 50 TTCTGGGATTTTTTGTTTTGTTTTGTTTTTTAATTTTCATGTTTCTAGAA ..:.x..x....................x..x:.....x..:......:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 79802800 NA +3375 chr4 + 190214555 103952673 103952672 103952753 81 ATTAGGCCAAGTATATTAAAGCAAACTAGTCCTAGCATGATTTGAATTTAGTAAAAAGGGGAAAATGGGGAGAGAAAAAAA chr4 + 94230402 18450238 18450237 18450318 18450238 18450237 18450318 81 ATCAAGCTAAAAATGTAAAAATGGATTAAACCCAGCATGTACTAAAATTAATATATAGGGGAAAATTAGGAAAAAAAAAAA ..:.:..:..:x..:.x...::::.:..:x..:......xx:.:..x...:..x.x..........x:...:.:....... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 85502435 NA +3065 chr4 + 190214555 103970398 103970397 103970452 55 TTCAGCTTCACACACACACACATAAAAATATATACATATGTGTGTGTATATATAT chr4 + 94230402 22600207 22600206 22600261 22600207 22600206 22600261 55 TTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCAT ....xx.x..x.....::..:.:........:..:..x.............::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 81370191 NA +3216 chr4 + 190214555 103970401 103970400 103970513 113 AGCTTCACACACACACACATAAAAATATATACATATGTGTGTGTATATATATAGTTAGTT---TTGAAGTTATTTATGT---TTATGTAAACTTTAAGATTGGATTGTTTGCTATTGCT chr4 + 94230402 74526072 74526071 74526188 74526072 74526071 74526188 117 AGATCCACACACACACACATG--AACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGTTTCTGTtttgcttgtttctttgtttgtttgtttTCCATTGTT ..x.:...............:--..:...:...x..:.:.::........:..x....x.---..x.:...::..:.x.---..x..:xx::..:xxx:..x.x......x.:....:. 21M2D37M3I16M3I37M 76/111 68.5% 117/94230402 0.0% 8/111 7.2% 29444329 NA +3170 chr4 + 190214555 104001010 104001009 104001079 70 CATGGTGGCGGGCACCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGAGAAAGGTGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x................:.::........x.xx.x...:x::x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 27967813 NA +3035 chr4 + 190214555 104010012 104010011 104010062 51 AATGTGTTTTGTATGTGTGTATACACACACACACACACACCAGGGAATACA chr4 + 94230402 30834198 30834197 30834248 30834198 30834197 30834248 51 AATATGTATTATATATATATATATACACACACACACACAGGAGGTAATGCA ...:...x..:...:.:.:....:...............xx...x...:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 73175814 NA +3179 chr4 + 190214555 104035878 104035877 104035961 84 GGAAAGAGAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAACTCACAGAACTACAGAGAAACAGATGAAGAAATTATCTT chr4 + 94230402 46579290 46579289 46579373 46579290 46579289 46579373 84 GGCAACTGAACAAAACGAGAGAGAGGGAGAGGGAGGAAAAAACAACTCACAAGTCTGTTGCAAAGCATTTGTACAAAAAGTCTT ..x..xx...x.:.:x.........:.....:...::.:............::x..::x.x:..:..xx..x.x...xx:.... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 57456588 NA +4005 chr4 + 190214555 104085217 104085216 104085413 197 AGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAGAGAA----GAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG------AAGAAAGAGAAGAATAAGAAGGAG chr4 + 94230402 91771688 91771687 91771890 91771688 91771687 91771890 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGAC----AAGTAAAGAATGAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG ..:..:x:..:x:......x..x..::.x.:.....x.xx.::::.:..x:x.x..:.:x..x....:x..:...:..x::x----..:x..:x...:...::.:x...x.....x----...x.:.::.x..:..::...xx.........:.x:x..::...:..:::...:.x:------....:x:....:...:..x..::. 82M4I30M4D57M6I24M 114/193 59.1% 203/94230402 0.0% 14/193 7.3% 12313529 NA +3893 chr4 + 190214555 104085217 104085216 104085413 197 AGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG------AAGAAAGAGAAGAATAAGAAGGAG chr4 + 94230402 91773927 91773926 91774129 91773927 91773926 91774129 203 AGGAGGCAAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGAAGAGAACAGATGAGGACAAGTAAAGAATGAGGAGAAAACTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAAAATGAGTAGAGG ..:..:x:..:x:......x..x..::.x.:.....x.xx.::::.:..x:x.x..:.:x..x....:x..:...:..x::xxx:x:..x::.x.:......::.x:::x:..:.x...x.:.::.x..:..::..:xx.........:.x:x..::...:..:::...:.x:------....:x:....:...:..x..::. 173M6I24M 108/197 54.8% 203/94230402 0.0% 6/197 3.0% 12311290 NA +4073 chr4 + 190214555 104085245 104085244 104085444 200 GGAGAAGGAGAAG-GAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAA--GAAAGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGA-------AGAAAGAGAAGAAAG chr4 + 94230402 59372551 59372550 59372755 59372551 59372550 59372755 205 GGAGAAAGTAATGCGAGGGGAAGTAATAG-----GAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAA-AAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG ......:.x:.x.-...::....x..x..-----......:..:x.--.....x:.x...x..x.::.:...:..x..x..x.:x..-..:.::.:x..:.::.:.::.:..:..x..x..:.:.:.:..x.:x..x..-...::x...x.:x..:..:.:.....x..x::.......x.:x.:.:.:-------.:x.....:.:.... 13M1I15M5D12M2I39M1I51M1D49M7I15M 123/194 63.4% 205/94230402 0.0% 17/194 8.8% 44712694 NA +4070 chr4 + 190214555 104085252 104085251 104085461 210 GAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGAAGAAAGAGAAG--AAAGAGAAGAAGAAGGAGAAG chr4 + 94230402 59372544 59372543 59372755 59372544 59372543 59372755 212 GAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAA-AAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG ..:.xx.:..::...x..x:x:..::....x.:x..:.:::.:.:.x:xx...::x:.x...x..x..:.:..::..x..x..x..x..-..:.::.:x..:.::.:.::.:..:..x..x..:.:.:.:..x.:x..x..:.::.x:.:x.....-.....:..x..x:.x.:......:x..x.:.:.--...xxx..x....:.:.:... 89M1I66M1D33M2I21M 120/209 57.4% 212/94230402 0.0% 4/209 1.9% 44712708 NA +3016 chr4 + 190214555 104085298 104085297 104085367 70 AGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535423 9535422 9535492 9535423 9535422 9535492 70 AGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ......x...x.xxx...:..:.:.....x...:.........:.x:.::..::....xx.:.:...:.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 94549875 NA +3495 chr4 + 190214555 104085307 104085306 104085455 149 GGAAGAA------GAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGAAGAAAGAGAAGAAAGAGAAGAAGAAG chr4 + 94230402 56107293 56107292 56107447 56107293 56107292 56107447 155 GGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAG .......------.:.:..:.:...x.:...::.:.:x.x:x:...:.x:x..x......:x.x.:..:....x.:x:..:....:.x.:::.x....x..:x.:.x:.:xx:x:::x:x.....x....:...:....:x.:..:.:..::... 7M6I142M 86/149 57.7% 155/94230402 0.0% 6/149 4.0% 47978014 NA +3696 chr4 + 190214555 104085360 104085359 104085499 140 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAG-AGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGA-AGAAAGAGAAGAAAGAGAAGAA-----------GAAGGAGAAGAAAGAGAAGAAGAAGAGGAAAGAA-GAAAGAAGAAGAAG chr4 + 94230402 56107309 56107308 56107462 56107309 56107308 56107462 154 AAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGATTGAGGAACAAG ..:...:..x..:.:.::...x.x.x.:.:..x.x..-......:..x.:.......x.:x...:....:.-:.:..x...:x.::xx..x...-----------....x....:...:....:x..:.:....:.:.:-..xx..:...x... 37M1I33M1I22M11I34M1I14M 94/140 67.1% 154/94230402 0.0% 14/140 10.0% 47978051 NA +3036 chr4 + 190214555 104121821 104121820 104121860 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 99712739 90501816 +3056 chr4 + 190214555 104121832 104121831 104121919 88 ATATATATACACACACACACACACACACACACGCACACACGCACACACACACAATGGAATA--CTATTTAACCATAAAAAGAAATGAAAT chr4 + 94230402 23247722 23247721 23247811 23247722 23247721 23247811 90 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAAT ..:.:.:..::........:x:.::x...:.:.:......::............x.:..x.--:..:x.:.x:.x.x.x.x.x....... 61M2I27M 58/88 65.9% 90/94230402 0.0% 2/88 2.3% 80874110 NA +3222 chr4 + 190214555 104143411 104143410 104143473 63 CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTC chr4 + 94230402 25163655 25163654 25163717 25163655 25163654 25163717 63 CCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCC ...:.x.:...x.:.:.::.:.:....x:..x......:...:.:......::..:.....:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 78979756 NA +3118 chr4 + 190214555 104143436 104143435 104143496 61 CCTCCCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT chr4 + 94230402 12085018 12085017 12085078 12085018 12085017 12085078 61 CCCCACTTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACT ..:.x........:x.:x.:..x..::.........:....:......:.:.:.:..:x.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 92058418 NA +3194 chr4 + 190214555 104150338 104150337 104150407 70 CAAAAACAAAACAAAACAACAACAAAAAACAAAACAAACAAACAAAAAACTTCTGTTTTCAGATGTTACT chr4 + 94230402 5597454 5597453 5597520 5597454 5597453 5597520 67 CAAAAACAAAACAAAACAGCAACAAAAAGACAAACAATC---CAAAAAACTGCTTCATTTCATTGTCATT ..................:.........:xx......x.---.........x..x:x..:x:x...:.:. 39M3D28M 52/67 77.6% 67/94230402 0.0% 3/67 4.5% 98552884 91661671 +3114 chr4 + 190214555 104150341 104150340 104150388 48 AAACAAAACAAAACAACAACAAAAAACAAAACAAACAAACAAAAAACT chr4 + 94230402 54341929 54341928 54341976 54341929 54341928 54341976 48 AAACAAAACAGAACAACAAAAAAACAAAAAGCAAACAAATAAAACATT ..........:........x....x.x...:........:....x.:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 49808412 NA +3039 chr4 + 190214555 104160653 104160652 104160730 78 AGAAAAAAGAGAAGAGAGATAGAAAGAGCAAGAAAGAGAGAGGGAAAAGAGAGAAAATACAGATTAAGAGTCTTAACA chr4 + 94230402 86089107 86089106 86089184 86089107 86089106 86089184 78 AAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGGGCATGCCAAAACTCCCAGCA .:......:.:....x..:x:...x..:.............x:.x....:x:...::x:..x:::..:.x..::.:.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 18071546 NA +3509 chr4 + 190214555 104182268 104182267 104182357 90 CTATTTCACAGAAGAAACAAGTGTGAACTTGTGTGTGTGCATGTGTATATTACATATACATATATATTTATATTTAACTCAACTTTCTCA chr4 + 94230402 51658553 51658552 51658642 51658553 51658552 51658642 90 CTATTTATCACAGAGAACAAGAGTGAGCAAGTGTGTGTGTGTGTGTATACCATGTATACATGTGTGTATGTCTGCACACAGACTTTTCCA ......xx..x.:::......x....:.xx.........::........::.::.......:.:.:.x.:.x.x:.xx:x:.....::.. 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 52523715 NA +3271 chr4 + 190214555 104236979 104236978 104237084 106 TATAACCTAAGACAAGTTGCTTTATTTCTCTGGCCCTCAATTTTTTCAACAGTAAAATGGGGATAACAA--------CCCCATTGCAAAGAATTCTTGTGAGGCATGAATGGTG chr4 + 94230402 79037115 79037114 79037226 79037115 79037114 79037226 112 TATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTCCACCTTTCCAAAG--TGCTTTGAAAGCATTATAGGTG ...:....x..:x.....::.......x....:x::......::.:...xx:.......x...x..:..--------.x..x..x.....--.x...xx:.:....x.xx.... 69M8I13M2D22M 73/104 70.2% 112/94230402 0.0% 10/104 9.6% 25199864 NA +3515 chr4 + 190214555 104239925 104239924 104239999 75 GCTTTTTTCCCTGTAACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578245 26578244 26578319 26578245 26578244 26578319 75 GCTTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....x:..::x.:..::.xx.:...................:.:.:.:.x.xx..:...:...x...::..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 77661680 NA +3417 chr4 + 190214555 104239942 104239941 104239995 54 TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....................:.:.:.:.:.:x..:...:...x...::..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 77661676 NA +3212 chr4 + 190214555 104239944 104239943 104239997 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 77661678 NA +3046 chr4 + 190214555 104239948 104239947 104240001 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.x.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 77661682 NA +3780 chr4 + 190214555 104244618 104244617 104244754 137 TTGGTTATTAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGTATGAATTTTAGAATAGGTTTTTCTAATTCT----GTGAAAAATGACATTGATACTTTGATAGAAATATCATTGAATCTGTAAATT chr4 + 94230402 39407340 39407339 39407479 39407340 39407339 39407479 140 TTGGTT-TTAGGTTTTTTTTTCTTTTTTCTTTTTTAACTTTATTGTTAAGTATTGTTCCAGCTCTAGAATAGCCTTTCCTACATTTAACAATTAATAATCATGTTATTACAAGTAAAGATGTGCTACTGAATTGGTAAATT ......-.....:........:......:......xx:...x..x..xx.:xx...x:x.::.:........x:...:...xx.:.----:.x..x...x.::..:x...xxxx.x...x:.:::.:.....:x....... 6M1D79M4I51M 90/136 66.2% 140/94230402 0.0% 5/136 3.7% 64837278 NA +3109 chr4 + 190214555 104269752 104269751 104269812 61 TTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTT chr4 + 94230402 13063267 13063266 13063327 13063267 13063266 13063327 61 TCTGCTCTGCTCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTTT .:.x..:.x..::.:x.....:....:...::.....:....:.:.x.....:....:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 91206485 NA +3089 chr4 + 190214555 104269764 104269763 104269812 49 TCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTT chr4 + 94230402 45927345 45927344 45927393 45927345 45927344 45927393 49 TCCATTCTTTTCTCTTCTCCTTTCCCCTATCCTTTTTCCATTCCTTTCT ...x...:...:..:.:......::...x..........x.......:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 58342419 NA +3129 chr4 + 190214555 104269776 104269775 104269823 48 TCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTC chr4 + 94230402 45927345 45927344 45927392 45927345 45927344 45927392 48 TCCATTCTTTTCTCTTCTCCTTTCCCCTATCCTTTTTCCATTCCTTTC ...x...:...:..:.:......::...x..........x........ 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 58342431 NA +4971 chr4 + 190214555 104277341 104277340 104277482 142 GTGTGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGGGAAAGGGAGAGGAAGGAACTGGAGG-----GGAGGGGAGGGAAGGAAGAAAA--GAAAAAATGAAATAAAAGATATTCAGATAAGAAAAGAAGAA chr4 + 94230402 1500694 1500693 1500842 1500694 1500693 1500842 149 GTATGTGGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaa ..:..x::.....::.:...:.:x:.::.....:.:x..:..:.......:.:::..x:...:.:.:..:..:x..:..-----x.......:x:.......:...--.:.....x:...x...::.x..xx.:...::.:.:...:.. 79M5I22M2I41M 91/142 64.1% 149/94230402 0.0% 7/142 4.9% 102776647 87437908 +3054 chr4 + 190214555 104307451 104307450 104307524 74 TATATATATATATGTGTGTGGGTGTGTGTATATATATGTGTGTGTGTACATATATATATATATATATATATACA chr4 + 94230402 39937175 39937174 39937248 39937175 39937174 39937248 74 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA .........:.:...::..........::xxx.x..::.::xxx::....:...:.......:...x..:.:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 64370276 NA +3211 chr4 + 190214555 104307966 104307965 104308040 75 GTCTGGAGAATCTTATAATTCCAGAGAGTGAGAAAGTACTAAAAAAAAAAAAAAAAAAAAAACCAACACAATAAC chr4 + 94230402 32372013 32372012 32372087 32372013 32372012 32372087 75 GTCTGGGTTTCCTTGTAACTCTCAGCTGCAAAGATGTATTGAAAAAAAAAAAAAGAAAAAAGCCACCACAATTAC ......:xxx:...:...:..:x::xx.::.::.x...:.:.............:......:...x......x.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 71935953 NA +3054 chr4 + 190214555 104350311 104350310 104350383 73 TGGGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGTGAGAGGACTGCTTGAAGCTAGAAGGTAGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x......::..........::........x:xx.x.:.x::......x.:.....x.xx:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 28317106 NA +3040 chr4 + 190214555 104350439 104350438 104350478 40 TCTCTCTCTCTCTCTTTTTTTTTTTTTTAAAAAAAGGAAA chr4 + 94230402 82024923 82024922 82024962 82024923 82024922 82024962 40 TCTCTCTCTCTCTCTTTTTTTTTTAATTAAAAAAGGAAAA ........................xx........:.:... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 22325516 NA +5399 chr4 + 190214555 104408942 104408941 104409186 245 AATTAACAAGAGTGGCTTGATGTCTTCTAAGCCCAGCAGTGTTGTGTTGTGGTTTTGCCTTTAAAAAATTCGTTGTATGTAATCAGCAGGACTCT--------GGCCTTTTAACTTTTAGCAT-GCTTCTACAGTTAAGCTGCTCTG-CTCCACACTCAAATAGCTGTCCACAGCTGCTGCAAATTGATTTATCCCTAGATAATGGCTGCAGCTGATGGCCAAAATGTCACTGCGAAACTGTTTAACAATTTAAG chr4 + 94230402 25157961 25157960 25158190 25157961 25157960 25158190 230 AATTAAGACGAG-GGCAGGATGCCTCCTAATACTTGGAATGCAGC----------TGGCTTCAGAGAA------GTGGATATTTAGTATGACCTCCTATGCTGAACCTTCCAACTTTGAACATTGCTTTAACAATTAAGCTTTTCTGGCCCTATGTTTAAATAGCTGTCCACAGCTACTGCAAATTGATTTATTGCCTGATGGGGATCAGGGATGCTGAGCAAA-------CACAGAACAGTTT-CTAATTTAAG ......x.x...-...xx....:..:....xx.:x.x.:..:x.:----------..x...:.:.:..------..:x:..x.:..:.x...:::--------::....::......x.:...-....:x...:.......x:....-.:.:.:::.:..................:................:x.:x...::x.::::x:.x..x..:x....-------::.::...x....-x:........ 12M1D32M10D13M6D21M8I20M1I23M1I76M7D13M1D10M 149/220 67.7% 230/94230402 0.0% 35/220 15.9% 79250981 NA +5908 chr4 + 190214555 104409010 104409009 104409135 126 TTCGTTGTATGTAATCAGCAGGACTCTGGCCTTTTAACTTTTAGCATGCTTCTACAGTTAAGCTGCTCTGCTCCACACTCAAATAGCTGTCCACAGCTGCTGCAAATTGATTTATCCCTAGATAAT chr4 + 94230402 7252665 7252664 7252784 7252665 7252664 7252784 120 TTTGCTTCATGTACTTGACATGACTCTGGCCTTATAACTTCTAAAATATTTCTCCAATTAAGCTGCTCAACCC----CTTAA--GGCTGTCCACGGCAGCTGCAAATTGATTTCTCCCATGATGAT ..:.:.x:.....x.:::..x............x......:..:x..::....x..:...........x:.:.----..:..--:.........:..x...............x....xx...:.. 73M4D5M2D42M 92/120 76.7% 120/94230402 0.0% 6/120 5.0% 97156345 93058210 +5643 chr4 + 190214555 104409031 104409030 104409190 160 GACTCTGGCCTTTTAACTTTTAGCATGCTTCTACAGTTAAGCTGCTC-TGCTCCACACTCAAATAGCTGTCCACAGCTGCTGCAAATTGATTTATCCCTAGATAATGGCTGCAGCTGATGGCCAAAATGTCACTGCGAAACTGTTTAACAATTTAAGGTGT chr4 + 94230402 14707744 14707743 14707904 14707744 14707743 14707904 161 GACTCTGGCTTGACGGCTTCTAGTATGCTTTCTCAATTAAGCTGTGCGTGCCCCCAAATTAAATAGCAATTCATAGCTGCTGCAAATTGATTTCCACCCAGGCTGTGGTTAGAGCTGCCAAATGAAATGTCGGAGAGGAGCATGTTCTTAATTTAGAATAT .........:.xx:::...:...:......::x..:........:x.-...:..xx.x.:.......x:.:..:...................x:x..:..::x:...:.:x.....x:::x::.......:xx.x.:.:.xxx..xx:......:::.:. 47M1I113M 103/160 64.4% 161/94230402 0.0% 1/160 0.6% 89701287 NA +3054 chr4 + 190214555 104438184 104438183 104438244 61 ATGTGTGTGTGTGTATATATATATACATATATATATACACACACACACATAGAGAGAGAGA chr4 + 94230402 23247722 23247721 23247782 23247722 23247721 23247782 61 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAA ........:..:::.:.:..x...:x.:....:..:.....:.......:.x.::..:.:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 81190462 NA +3492 chr4 + 190214555 104438201 104438200 104438302 102 TATATATACATATATATATACACACACACACATAGAGAGAGAGAGAGAGAATACTAGTCAGCCATAAAAAGAAGGAAATTCTGTCATTTGTGACACGATAGA chr4 + 94230402 74671076 74671075 74671177 74671076 74671075 74671177 102 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAACAAAGCAGA .:......:.........:.............x.:.:.:.x..xx.:.:..x.:..:xx.xx..x..:...:.:x..:..xx:.x.x..:::...x:::... 102M 65/102 63.7% 102/94230402 0.0% 0/102 0.0% 29767125 NA +3509 chr4 + 190214555 104453000 104452999 104453064 65 CAGTGG-GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-....x......:.........::::........x.xx.x...x::...........:.. 6M1I59M 51/65 78.5% 66/94230402 0.0% 1/65 1.5% 28419801 NA +4095 chr4 + 190214555 104453110 104453109 104453373 264 AGGCAACAA--GAGTGAAACTCTGTCTAAAAAATAAATTAAAAAAGAAAA--AAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAA--AGAAAAGAAAAA---AAAGAAAAGAAAAGAAAAG----AAAAGAAAGAAAAGA---AAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 85559852 85559851 85560131 85559852 85559851 85560131 280 AAGCAACAATAAAGTCAATGGTTATTGAAGAGGGAAAGGAAAAAAGAACAGCAAGAGACAAACCAAGACAGATTTAACATCATTAAATAAGAACTCAGAGAAGATAAGTCTAAGGCAGGGAAGAGCTAAGTCTCAAATGGCATAAAAGATACAAAGTCAAGACAAGCAAGCACAAGAGAACAGAAAACAGAGCAAGAGAATAATGACTCAGAAAAAGCACAGAGAAAAAGAATAACATGCATAACAACAGCAAGAGAACGGAGGGGACAAATAAAAAAGG .:.......--:...x..xxx:.:.:x..:.::x...xx.........x.--......x:..xx..:.x.:.xxx..x:xx.xx.:.x.....x--...:....x..:---..:.x.::...:..xx...----...x.:x.x......---....xx....x...x..:..x....:....:..:.x.:::x....:..x..x:.xxx.:..:..:x:x.:......::..x:.x.x.x.x.:x..x::x....:..x.:.::.:.x.:.x..:...:. 9M2I39M2I42M2I12M3I19M4I15M3I128M 161/264 61.0% 280/94230402 0.0% 16/264 6.1% 18893258 NA +4818 chr4 + 190214555 104453111 104453110 104453316 206 GGCAACAAGAGTGAAACTCTGTCTA--AAAAATAAATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAA------AAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAG-----AAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 34805244 34805243 34805459 34805244 34805243 34805459 216 GGAAGCAGGAGGGAGAAGCTGGCTGTGACAGCTTTAATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAG---GGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAA ..x.:..:...x..:.xx...x..:--.x.:x.xx.x.:..::....:::xx:.:..x::::.....x:.....:.......:...x.x:..:..------.x...x:.x..::x.x...........x.x..---.:.x..:.x.:.::..:..:x......x::.:....x:...-----..:.:..:......x:..::.....::x.:.:..... 25M2I68M6I32M3D41M5I37M 127/203 62.6% 216/94230402 0.0% 16/203 7.9% 69647867 NA +3200 chr4 + 190214555 104453132 104453131 104453185 54 TCTAAAAAATAAATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGG chr4 + 94230402 39377208 39377207 39377261 39377208 39377207 39377261 54 TCCAAAACACCTATTAAAAAAGAAAGATCAGAGGAAAAAAAAAAAAGGGAAAGG ..:....x.:xx.............:.xx...:.........:...:....... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 65075924 NA +3952 chr4 + 190214555 104453135 104453134 104453283 149 AAAAAATAAATTAAAAAA------GAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGA---AAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAA chr4 + 94230402 65771180 65771179 65771336 65771180 65771179 65771336 157 AAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAAC-AAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAA ..:.....xx...:..:.------:...........x....:.:.......x.x.::..xx...::.:.:....---.:..x:....x...x:xx.::..:..:.:.:....x-..:x:.::..x.x.....:x..x.xx....xx.::....:.... 18M6I50M3I36M1D44M 97/148 65.5% 157/94230402 0.0% 10/148 6.8% 38681955 NA +3315 chr4 + 190214555 104453136 104453135 104453292 157 AAAAATAAATTAAAA-AAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAA chr4 + 94230402 78266952 78266951 78267109 78266952 78266951 78267109 158 AGAGATAAATCAGCCTAAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAACATTATGAAAACAAAATATGGCCAAGGGAATAGTAAGGAA .:.:......:.:xx-.......x.:...xx........:..xx::..:......:::.:.:.:.:::....x.xx..:.xx.:.x..:x:x...:.x..xx...xx..xx:..x...x:xx.x..........x.x::.x..:.:..x::x...:.. 15M1I142M 93/157 59.2% 158/94230402 0.0% 1/157 0.6% 26186184 NA +3399 chr4 + 190214555 104453136 104453135 104453221 86 AAAAATAAATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGA chr4 + 94230402 85790948 85790947 85791033 85790948 85790947 85791033 86 AAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAACCCAGAAGA ..:.x..:.......:.::.....:.:.........:..:::...:::.x...::..:..x.:..x.x::.:.:...xxx.:.... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 18662188 NA +4336 chr4 + 190214555 104453148 104453147 104453319 172 AAAAAGAAAA--AAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGA---AAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAA--GAAAACAAAAGAAAAC-AAAAGAAAAGAA------AAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 75995058 75995057 75995243 75995058 75995057 75995243 186 AATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAAAGAACTAGAAAAACAGCAAGGGAGAAGCAATTATGAAAACAACAACAAAAAAAACCCCAAACAGCAGGCAATGAAGAGAATACAACTTGTTAAGAAAAGGAGAAAAACAGAAAGAAGTACACAA ..x......x--....::......x.......x:...:...:.....---.:::..x.x:......xx.:..:..x..x..:.:.:.::x..xx.x.....x..x.:x...:....--xx.....:x..:x..:-..:....x.x..------.......::......:x.:.:.:...x.x.x.. 10M2I35M3I66M2I16M1I12M6I33M 117/172 68.0% 186/94230402 0.0% 14/172 8.1% 28458090 NA +3860 chr4 + 190214555 104453149 104453148 104453318 170 AAAAGAAAAAAGAGAAGAAAA-AAAAGAAAAGGAAAGG--AAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGA---AAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAA----AGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 49044652 49044651 49044827 49044652 49044651 49044827 176 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAA----AGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA ......xx........:.:..-..:...xx...::x..--.:.....x...x.:x..:...x.xx..:x..:..----..::....---..........:.:.::x.....:x:..::...x:......x:x.:x.....----...xx..:..:.::.....x:.:x:.x...x.x.:. 21M1I16M2I34M4D8M3I51M4I36M 110/166 66.3% 176/94230402 0.0% 14/166 8.4% 55408497 NA +4363 chr4 + 190214555 104453161 104453160 104453372 212 AGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAA--AACAAAAGAAAACAAAAGAAAA---GAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAG--AAAAGAAAA chr4 + 94230402 61281963 61281962 61282179 61281963 61281962 61282179 217 AAAATAAAAGTGGGAAGAGAAAGGGCAAAAGAACAGATGAAACCTGAAGGAAACAAAACACTGATAATGAAAATGAGAAAGTTACCAAGACAAGAATAGAAGGAACAAAAATCCCTTAAAGGAAATATGTGGAGGGAGAGAAATACTAGAAGCAAAGGAAAGACAGGGTAAGGAA--TAAATAAATGGAACGACAGAGAACAGAAATGGCAGAAGGAAA .:..x....:x::...:..:..:..x.......x...x:.:.xxx...::...x:...x:xx:.x..x::...x..:.:.:xx:xx....x.....x....--.......:xxxx:x....:...---.x::..::.:.:.:.x.xx.:...x....:.....x.:.:x...:..--x...x...x.:..x..x.:....x.....x.--.:...:... 101M2I22M3I47M2D31M2I9M 131/210 62.4% 217/94230402 0.0% 9/210 4.3% 43171198 NA +4472 chr4 + 190214555 104453166 104453165 104453336 171 AAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAA---------GAAAAGAAAAGAAAGAAAAGAAAAG-AAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 + 94230402 34805279 34805278 34805459 34805279 34805278 34805459 181 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAA ..x:..::::..:..xx:...:x::.:.....x:..:..:.:.......:.x:x.....---------...x::x....x.x...........-.x.:.:.x..:.x.x.::..:..::....x.x::.:...xx:..:x:xx..........:..:.x:..::.....::x.:.:..... 59M9I25M1I87M 105/171 61.4% 181/94230402 0.0% 10/171 5.8% 69647887 NA +3983 chr4 + 190214555 104453168 104453167 104453380 213 AAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAA--------AAGAAAAAAAAGAAA------AGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAGTGCTGCT chr4 + 94230402 65771127 65771126 65771344 65771127 65771126 65771344 218 AAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAA-AAAGAGAATAAAAGAGAGAAAAGCACA-------AAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAG-AAAGCAATAATAAAGTCAGTAAAAAAAAAATGATACT .....:.x.:.....x:.::x..:x.....x.::..--------.:.:xx.:x......------....:.xx:.:.....-.....:..x......:.::...:x.x.-------....:x.:..:......:.:xx.:.:x.....x.:.x.xx.:..::.::::...:..x..:x:.::..x.x..-....x..x.:x....xx.:x....:....:..x.:.. 36M8I15M6I16M1D27M7D73M1D37M 128/204 62.7% 218/94230402 0.0% 23/204 11.3% 38682041 NA +3051 chr4 + 190214555 104453168 104453167 104453228 61 AAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAA chr4 + 94230402 70502003 70502002 70502063 70502003 70502002 70502063 61 AAAGGGGAAAAGGAAATGAAAGAGGAAAAAAAAGAAAGGGAAAAGCCACACAGACAAAAAA ...:::..........x....:..:...:........:.:....:xx:x.x...x..:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 33951165 NA +3188 chr4 + 190214555 104453168 104453167 104453217 50 AAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAA chr4 + 94230402 57629739 57629738 57629788 57629739 57629738 57629788 50 AAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ..........x.:.......:......:.:.....:.::::.......:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 46823429 NA +3896 chr4 + 190214555 104453172 104453171 104453359 188 AAGAAAAGGAAAGGAAAAAGAAAAGAA-------AAGAAAAGAAAAAAAAGAAA-AGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA------AAGAAAAGAAAAGAAAAAGAAAAGA chr4 + 94230402 75995036 75995035 75995235 75995036 75995035 75995235 200 AAGAAGGTAGGATGAACATGACAATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAAAGAACTAGAAAAACAGCAAGGGAGAAGCAATT--ATGAAAACAACAACAAAAAAAACCCCAAACAGCAGGCAATGAAGAGAATACAACTTGTTAAGAAAAGGAGAAAAACAGAAAGAA .....::x:::.x...x.x..x..x..-------.....:......x.......-....::..:..::.xxx.:::..x.x:......xx::...:.x.:...::..:..xx..xx--.x.....x..x..x.:....:.xxxx...x::x.:.x..x...:....x.x..------........:.:.:...x.....::. 27M7I20M1I61M2D53M6I25M 119/186 64.0% 200/94230402 0.0% 16/186 8.6% 28458136 NA +3533 chr4 + 190214555 104453202 104453201 104453366 165 AAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAG---AAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAG---AAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAA chr4 + 94230402 49044652 49044651 49044817 49044652 49044651 49044817 166 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACT---AAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAA--GAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAA ......xx...:.........x.::.:.xx.::.:x:.---:.....x...x.:x..:...x.xx---...x:.:x..::...:..xx..::...:......:.---....x:............--:..x...:x::...:xx:...xx..:..:..::..:.x:..x.. 38M3I24M3D36M3I18M2D44M 102/160 63.8% 166/94230402 0.0% 11/160 6.9% 55408550 NA +3001 chr4 + 190214555 104453206 104453205 104453271 66 GAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAA chr4 + 94230402 59418548 59418547 59418613 59418548 59418547 59418613 66 GAAAGAGGAGGATGGGAAAGTGATCAGAAATAAGAAAGGAATAAAAAAAAAAAGAAACCAAAAAAA ....:.::..:.x:.:....x:.xx.:..:x......:...x.:....:........x.....:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 45034658 NA +4173 chr4 + 190214555 104453221 104453220 104453373 153 AAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAA-------AAGAAAAGAAAAGAAAAGAAAAGA-------AAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 61281963 61281962 61282129 61281963 61281962 61282129 167 AAAATAAAAGTGGGAAGAGAAAGGGCAAAAGAACAGATGAAACCTGAAGGAAACAAAACACTGATAATGAAAATGAGAAAGTTACCAAGACAAGAATAGAAGGAACAAAAATCCCTTAAAGGAAATATGTGGAGGGAGAGAAATACTAGAAGCAAAGGAAAGACAGG ....x.....x::::.:.....:.:x..:.:..x.:.x....x.x:...:........x.xx::x..x.....x:....-------....x.....x....:::.x..:.-------....:...x.x:x.:.::..:.::..x.xx.:...x....:.....x.:. 79M7I24M7I50M 99/153 64.7% 167/94230402 0.0% 14/153 9.2% 43171258 NA +3405 chr4 + 190214555 104453245 104453244 104453338 94 AAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAA-------------GAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 90892097 90892096 90892203 90892097 90892096 90892203 107 AAAAGGAAAATAGAATAATCAAAGCAAAAAATAAGTAATATGCATCAGGTTTGAAAAGCAAGAAAGGAAAGAAAAGAAGCAGGAAGCAAAGATAGCAAAGGAAAAAA .....:...:x.:.:x..x....:x....x.x...x..x-------------......x..:....:...........:x:::...x.....x.:x...:.....:. 39M13I55M 67/94 71.3% 107/94230402 0.0% 13/94 13.8% 13561148 NA +3532 chr4 + 190214555 104453247 104453246 104453370 124 AAGAAAAGAAAAGAAAAC---AAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA---AGAAAA-----GAAAAGAAAAAGAAAAGAAAAGAAAAGAA chr4 + 94230402 76625720 76625719 76625854 76625720 76625719 76625854 135 AAACAAGGGAAAGAAGCTGCGAAGTGAAAACAAAACAAAACAAAAAACAAATAGGATAGAAGTGGAACAGAGAGAACAGAGTGGAAAACAAATACAGAAGGACTGTGGAAAAAATAAGAATAAAGATGCACAGAA ..:x..:.:......:x:---..:x..........x....x....:.x...x..:.x....:x.:..x::.:....x...:x:.....x...---....::-----.:...:..x.....x.:.:.x.x.x.... 18M3I71M3I6M5I29M 85/124 68.5% 135/94230402 0.0% 11/124 8.9% 27827527 NA +3058 chr4 + 190214555 104453252 104453251 104453307 56 AAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAG chr4 + 94230402 77634766 77634765 77634821 77634766 77634765 77634821 56 AAGAAAAGTAATTTAAAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAAG ........x..x:x...:..x:.....:....:.........x...x...x..... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 26818486 NA +3332 chr4 + 190214555 104453258 104453257 104453369 112 AGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAA------AAAAAGAAAAGAAAAGAAAAGAA-------AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGA chr4 + 94230402 49044652 49044651 49044776 49044652 49044651 49044776 125 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAA .:..:.:x.....:..x.:..x..:...xx..::------.:.....x...x.:x..:...x.-------.::..::...:..xx..::......:.:.::x......x:............::. 34M6I23M7I55M 74/112 66.1% 125/94230402 0.0% 13/112 11.6% 55408606 NA +3061 chr4 + 190214555 104453267 104453266 104453342 76 AAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601026 71601025 71601101 71601026 71601025 71601101 76 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG .:...:.x.::.:::...x......x...x...x.:..:....x::.x.x...x.x:............::...:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 32852241 NA +3004 chr4 + 190214555 104453275 104453274 104453347 73 AAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG chr4 + 94230402 71601029 71601028 71601101 71601029 71601028 71601101 73 AAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGG ..:...::.:::...x...:..x...x...x.:..:....x::.x.x...x.x:............::...:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 32852246 NA +3204 chr4 + 190214555 104459723 104459722 104459791 69 TCCTTCTGTCTTTTCTTCCCTCTTGTTCTCTCTCCTTCCCTCTTCCTTCTCTTTCCTTTATTTTCTCTT chr4 + 94230402 34366984 34366983 34367049 34366984 34366983 34367049 66 TTTTTTTGTGTTTTCAT---TTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCTT .::..:...x.....x.---.:.......:............::..::...:::..::.x....:.... 17M3D49M 48/66 72.7% 66/94230402 0.0% 3/66 4.5% 70092739 NA +3023 chr4 + 190214555 104526657 104526656 104526710 54 TCTCTATGTATATGTGTGTGTATATATATATATATATATAATTTCTAAAGTAAT chr4 + 94230402 36926349 36926348 36926402 36926349 36926348 36926402 54 TCTCAACGTGTGTGTGTACGAATATGCATATATATATATATTCTCTAAAATTAT ....x.:..:.:.....::.x....::.............x.:......:.x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 67600308 NA +3109 chr4 + 190214555 104544548 104544547 104544613 66 AATTTTTCATACCTTAAAACAAACAAACAAAGGACAACAACAACAAAAAC----CTTTTTTTTTATATTA chr4 + 94230402 89758348 89758347 89758417 89758348 89758347 89758417 70 AGCTTTCCATCATCTGAAACAAACAAACAAACAACAACAACAACAAAAATTGAACaattttttaaaatta .::...:...xx::.:...............x:................:----.xx......x.x.... 50M4I16M 51/66 77.3% 70/94230402 0.0% 4/66 6.1% 14786200 NA +3083 chr4 + 190214555 104561611 104561610 104561678 68 TGCTAACAGCACCCTTCAATTCAGTATCATCTGCAAATTTCATTAACATATTGTTTACTCCCTTTCCA chr4 + 94230402 56715516 56715515 56715576 56715516 56715515 56715576 61 TGTTTACAGCACCTCTCACCTCACTACCATCTGCAAATTTTATTAAC-TAT------CTTCTTTTCCA ..:.x........::...x:...x..:.............:......-...------..:.:...... 47M1D3M6D11M 50/61 82.0% 61/94230402 0.0% 7/61 11.5% 47846095 NA +3302 chr4 + 190214555 104581399 104581398 104581471 73 TGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATTGCTTAAACCCAGGAGATAGAGATTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::........x.xx.x...x::...:.......:..x.xx:.::..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 28548194 NA +3037 chr4 + 190214555 104589443 104589442 104589481 39 CCTCTCTCTCTCTCTCTGTCTCTCTCACACACACACACA chr4 + 94230402 75248048 75248047 75248086 75248048 75248047 75248086 39 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACA ...::............x......x.............. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 29341395 NA +4465 chr4 + 190214555 104601889 104601888 104602116 228 GTTGGTACTCTTTTCCTTCCTTCCTTCCTTCCCTTTG----TTTCTCTTTC-TCTCTTTCTTTCTTTTCCTT----------CCTTCCTCCCTCCCTCCCTCCTTTTCTTTCTCT--TTCTTTCTTTTCTTTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTT---TCTTTTCTTTTCTTTCTTCTCTCCTCTCCTCTCCTCTCCTTT chr4 + 94230402 19215323 19215322 19215560 19215323 19215322 19215560 238 GTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCT----------TTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCT .......xx:....x:..:x..:::.:x..xx:.x..----..:.x.....-...:..xx:x.x..:...:.----------x.::..:..::...:...:.:....:...:.:.--....xx.xx......x....----------...:......xxx....x.x..:..:xx...::....x......:.x:::..:...---x...:....xx....:....x:.:.x.x:.:.:..x....:. 37M4I10M1I20M10I33M2I20M10D56M3I42M 141/218 64.7% 238/94230402 0.0% 30/218 13.8% 85386566 NA +3626 chr4 + 190214555 104601967 104601966 104602119 153 CCCTCCCTCCTTTTCTTTCTCTTTCTTTCTTTTCTTTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTT-----CTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCTCTCCTCTCC---TCTCCTCTCCTTTCCT chr4 + 94230402 52146234 52146233 52146394 52146234 52146233 52146394 161 CCCACCCATTTGTGCTTCTCTCTTCCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTCTTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTCTTCTCCACTTCTACTCCCTTTTGCT ...x...x::.x.x...:::::...::..:...:......:..:xx:x.:.xx..x.:x:.x:::....x..xx...:.x.x:....::....-----.:x:x.x........::xxx::.......::.......:.....---...x...:.:...x.. 93M5I44M3I16M 93/153 60.8% 161/94230402 0.0% 8/153 5.2% 52455733 NA +3501 chr4 + 190214555 104601975 104601974 104602079 105 CCTTTTCTTT-CTCTTTCTTTCTTTTCTTTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTTTCTTT chr4 + 94230402 61949701 61949700 61949805 61949701 61949700 61949805 105 CCTTTTCTTTGAACTCTACTGCTATGCTCCTTTC-ATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTT ..........-xx..:.x:.x..x.x..::....-x.x..::x..:..:..::....xx.x:....................:...:..:xx.x.x.....x.... 10M1I23M1D71M 73/104 70.2% 105/94230402 0.0% 2/104 1.9% 42652274 NA +3566 chr4 + 190214555 104601976 104601975 104602105 130 CTTTTCTTTCTCTTTCTTTCTTTTCTTTTTTCTCT-TCTTTTTCTTT-------ATTTCTTCCTTTCTTTCTT-------TTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCTCTCCTCTCCTC chr4 + 94230402 21408807 21408806 21408951 21408807 21408806 21408951 145 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTCCCC .....x...::....:.x::xx......:.x:.:.-...........-------...:.::..:.:..::..x-------..........::........::.:..x.::.:x:.x:xxx::.x::........:x...:...:. 35M1I11M7I19M7I65M 84/130 64.6% 145/94230402 0.0% 15/130 11.5% 83193169 NA +3397 chr4 + 190214555 104602053 104602052 104602110 58 TTTCTTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCTCTCCTCTCCTCTCCTC chr4 + 94230402 43923906 43923905 43923963 43923906 43923905 43923963 58 TTTTTTTCTTCTTTGTTCTTTATCATTATTATTCTTTCTTCTTTCTTCTCCTTTTCTC ...:..........xx.....x..x..x:.x...........:..:......:.:... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 60678147 NA +3281 chr4 + 190214555 104604228 104604227 104604317 90 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGACGGAGGCTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:.........:.::........x.xx.x...xx:.x......::.:..x:xx:.....:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% 28571022 NA +3153 chr4 + 190214555 104649395 104649394 104649455 61 GTGGTGCACCTGTGGTCCTAGCTACTCAGGAGGCTGAGGTGAGAGGATCATTTGAGCCCAG chr4 + 94230402 76033201 76033200 76033261 76033201 76033200 76033261 61 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG .........x...:..:.:.......::::........x:xx.x.:.x..:....:..... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 28616194 NA +5112 chr4 + 190214555 104679752 104679751 104679945 194 ACAATAAATCTCCT-TAACTTATTCAACTTTATAAACACCTGTTCAGTAGTTTATAAAATTTTAAAGCTAATGGTATAACAAACTCAAATGATGATATTTTATATTTATAAGTGCATCCTGAGATGAATAAGT------------AATGAAAACACA--GTCTGCTGCTACTAAAAGTGAGGGGCTTAAGAAGTTTAGCTACAAAGAGA chr4 + 94230402 10775354 10775353 10775550 10775354 10775353 10775550 197 ACAGTAATCCGCTTGTAACTT-TTCAACTT----GTCACCAG-------GTTTATAAAACTTTAAAGCTAGTGCTATAACAAACTGAAACAATGTTATTGCAGATGTAGGAGAGCATCTCGGGATGAATAAATTATAGGAGCCACAAAGAAATCACAACGACAGCGGCTGCATGCTCTGAGTTGCTTATGGTGAGCAGATACACAGGGA ...:...x:.x.:.-......-........----:x....x.-------..........:..........:..x...........x...::...x....x:.x..x..x:..x.....::.:.........:.------------..x....x....--.x.x..x...:.xx:xxx....xx.....x.:x.xx:..x....x..:.. 14M1I6M1D8M4D8M7D84M12I12M2I50M 133/182 73.1% 197/94230402 0.0% 27/182 14.8% 93904398 NA +3220 chr4 + 190214555 104679770 104679769 104679879 110 TTATTCAACT-----TTATAAA------------CACCTGTTCAGTAGTTTATAAAATTTTAAAGCTAATGGTATAACAAACTCAAATGATGATATTTTATATTTATAAGTGCATCCTGAGATGAAT chr4 + 94230402 74956173 74956172 74956299 74956173 74956172 74956299 127 TTATTCAACTGTGCTTCATAAGTACTCAGTCTGTCACCTGCACAGAAGCTTATGCATTTTTAAAGACAATAGTACAACAAAATCAAGAAGCCTTATAGCAGATGTTAGAGTTCACCCTGGGATATAT ..........-----.:....:------------......:x...x..:....:x.x........x:...:...:......x....:x:::xx...xx:.x..x.xx:...x..:....:...:x.. 10M5I7M12I93M 76/110 69.1% 127/94230402 0.0% 17/110 15.5% 29723597 NA +3096 chr4 + 190214555 104700475 104700474 104700544 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 28667278 NA +3082 chr4 + 190214555 104700610 104700609 104700674 65 GTCTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGCTGATTAGTATATGAAAAAGTTTAGCTTT chr4 + 94230402 57340704 57340703 57340768 57340704 57340703 57340768 65 GTCTTAAAAAAAAAAAAAAAAGTGTAAAAAACAAATCTTATGAATACGTTAAAGGATTTGGCATT ....:................:x.x....:.x...x..x..x.:..::.x...:::...:..x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 47359906 NA +3076 chr4 + 190214555 104725555 104725554 104725624 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAACGGTGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:...........:.........x.xx.x...xx::x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 28692358 NA +3079 chr4 + 190214555 104750750 104750749 104750803 54 ATGAACAAACAACAACAAAACAACAACAACAACAACAAAAACCCTGGCTGTCCT chr4 + 94230402 66076814 66076813 66076867 66076814 66076813 66076867 54 ATGAACAGAAAAAAAACAAACAACAACAACAACAAAAAAAACCCTACATATCTT .......:.x..x..xx..................x.........:xx.:..:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 38673936 NA +3357 chr4 + 190214555 104757385 104757384 104757451 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTAACCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x.....:.x.....:..x.xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 28724174 NA +3048 chr4 + 190214555 104800752 104800751 104800826 75 AGGTCAATGAAGAAATTAAGAAGAAAATTTTAAAAATCTTTAAACACGTGAAAATAGAAACACAATATATCAAAA chr4 + 94230402 33821935 33821934 33822009 33821935 33821934 33822009 75 AAGTCAATGCAGGCCTTGAGAGCAGTATTTTTATAACTTCTGAAAATTAGAGAATAGAAACACAATTTATCATAA .:.......x..:xx..:...:x.:x.....x.x..::.:.:..x.:xx..:..............x.....x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 70978817 NA +3158 chr4 + 190214555 104806641 104806640 104806743 103 GTTGTGCACATGTACCCTAAAACTTAGAGTAAAAAAAAGAAAAAGAAATTAAAGCACACAAAAATTAAAAAATATTCTATG--TTCATTGATCAAAAGAATCAAT chr4 + 94230402 57049011 57049010 57049115 57049011 57049010 57049115 105 GTCATAAAAATGGACTGCAAAAACAGGAGATAGCAAAGTAAATAGAAGTTCAAGTAAACTAAAATTAAAAAGTATTCTATGCCTTGAATTATAAACAGATTAAAT ..::.:x.x...x..:x:....x:x:...xx.:x...:x...x....:..x...:.x..x...........:.........--..x.x.x..x..x...x.x... 81M2I22M 70/103 68.0% 105/94230402 0.0% 2/103 1.9% 47757630 NA +3173 chr4 + 190214555 104807272 104807271 104807410 139 AGGACATTGGCCTAGGCAAAAATTTCCTAAG-ACCTCAAATGCACAGGCAACCAAAGCAAAAGTATATAAATAGGATAACAACAAAAACTTCTACACAGAAAAAAAAAAAATCAACACAGTAAAGAAACAACTGATAGAA chr4 + 94230402 28327297 28327296 28327413 28327297 28327296 28327413 117 AGCATATTGACCAGG--AGAAATCTCCCAAGCACCTC--------------CTTGGGCAAAAATGAA------AGACAA-AATGAAAATCCCAACACAAAAGAAAAGAAAATCAAGGCAAGAGAGAAACAACCAATTGAA ..x.:....:..x:.--.:....:...:...-.....--------------.:x::......:.:x.------:..:..-..::....:::.x.....:..:....:........x:..:x.:.........::..x... 15M2D14M1I5M14D16M6D6M1D60M 82/116 70.7% 117/94230402 0.0% 24/116 20.7% 76479975 NA +3096 chr4 + 190214555 104828919 104828918 104829008 90 GCATCTCGACCAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACACAA-------ATAGACCAAATAGGCAAT chr4 + 94230402 26446812 26446811 26446905 26446812 26446811 26446905 94 GCATCTTCACCTCACCACAAAA---AAAAACCAAAAAACCCAACAAACACACACACACACACACCCCCCAAAACCCTCCACAGACCTAACCAACAAT ......:x...xx.xx.x....---......x.......xx..x....................x.x.xx..-------.:.....x..:x::.... 22M3D47M7I18M 66/87 75.9% 94/94230402 0.0% 10/87 11.5% 78382107 NA +3351 chr4 + 190214555 104828929 104828928 104828998 70 CAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACACAAATAGACCA chr4 + 94230402 79014267 79014266 79014336 79014267 79014266 79014336 70 CAACATAGAAAATAAAGCTACCAATGAAAAAAAGAAAAACACACACACACACACACAAAAAAACAACCCA ...x.x.:....:...:xx..x..x:..x....:...x...................x.x...:.:x... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 25814662 NA +3063 chr4 + 190214555 104828932 104828931 104828977 46 AAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACA chr4 + 94230402 75561895 75561894 75561940 75561895 75561894 75561940 46 AAAAAAAAGAAAGAAAACAAACAAACAAACAAAATACCCACACACA ........:x..:........x.......x....:..x........ 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 29267037 NA +3191 chr4 + 190214555 104853844 104853843 104853915 72 GCACCTGTAGTCCCAGCTACTCAAAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::..........x.xx.x...xx:.x.......:.:..x:xx:.x...:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 28820638 NA +3253 chr4 + 190214555 104866371 104866370 104866417 47 ATATATATACACACACACACACATACACATATATGTATACACACACT chr4 + 94230402 46140856 46140855 46140902 46140856 46140855 46140902 47 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACT ................x.x..........:.::......:...x... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 58725515 NA +3030 chr4 + 190214555 104882590 104882589 104882656 67 AATTGAAATATTGGATATTTGGTTACTCTGTCTCCTATGATCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 36963328 36963327 36963394 36963328 36963327 36963394 67 AATCAAAACATTTTATTCTGAATTAGTCTACCTAAAATAATCTTTTTTTTCTGTTTTTTTTTTTTTT ...::...:...xx..x:.x::...x...::..xxx..:...........:.x.............. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 67919262 NA +3519 chr4 + 190214555 104916483 104916482 104916586 104 CACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCTACTGTGCTCC---AGCCTG chr4 + 94230402 76033207 76033206 76033312 76033207 76033206 76033312 106 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ...x......:.........::.:........x.xx.x...x.:..........::..x:xx:..:..:..-:.xx...x::..x..x:x....:x..---...... 71M1D26M3I6M 71/103 68.9% 106/94230402 0.0% 4/103 3.9% 28883276 NA +3149 chr4 + 190214555 104928140 104928139 104928198 59 AAAGAGAAAAAGAAAGAGAAAGGAAAGGAAGAGAGAGAGAGAAAG----AGAGAAAGAAAAGA chr4 + 94230402 10788496 10788495 10788558 10788496 10788495 10788558 63 AAAGAGCAGAAGAAATAGAAAGGAACAGAAAAGGGAGGGAGGGAAGATCAGAGAAGAAAAAGA ......x.:......x.........x:...:..:...:...::.:----......::...... 45M4I14M 46/59 78.0% 63/94230402 0.0% 4/59 6.8% 94139644 NA +3014 chr4 + 190214555 104957160 104957159 104957208 49 CATATATATATACACACACGTATATATATATACATATATATATACACAC chr4 + 94230402 27759112 27759111 27759160 27759112 27759111 27759160 49 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACAC .....:...x....x....:...:.:.....:...:....:.::..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 77198048 NA +3512 chr4 + 190214555 104957225 104957224 104957343 119 ATATACATATATATACACATATATATACATATATACATATATATACACATATATACGTATATATGTATATATATACGTATATATATACGTATATATATGTATATATATGTATATATATG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCT--GTGTATATGTGTATGAATATGCATGCACACG ..x.:.x....:..:::::.x.x.:.:x:::...x:....:..:x........:x...:..:x.:..::...:...x:..::x.x.--..:.....:.....:x.....:..::.:.:. 86M2D31M 71/117 60.7% 117/94230402 0.0% 2/117 1.7% 83848038 NA +3213 chr4 + 190214555 104957229 104957228 104957302 74 ACATATATATACACATATATATACATATATACATATATATACACATATATACGTATATATGTATATATATACGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT ...:.:....x.....::.x.:....::.....x.x....::.:..x.:.::..:......:..::.::..x.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 82357031 NA +3137 chr4 + 190214555 104957239 104957238 104957314 76 ACACATATATATACATATATACATATATATACACATATATACGTATATATGTATATATATACGTATATATATACGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATAT--GTATATTTGTGTGTGTATATGCATGCACGTAAGT .....:....x:....::.x...:..::.....x.x....--......x...:.:.:....:.:..::.::..x.. 40M2D34M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% 82357041 NA +3304 chr4 + 190214555 104957249 104957248 104957323 75 ATACATATATACATATATATACACATATATACGTATATATGTATATATATACGTATATATATACGTATATATATG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:...:....x..:..::.x......::....:x.x..........x.:.::..:.....::.:.:.::..x:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 82357051 NA +3093 chr4 + 190214555 104957273 104957272 104957335 63 ATATATACGTATATATGTATATATATACGTATATATATACGTATATATATGTATATATATGTA chr4 + 94230402 61270779 61270778 61270841 61270779 61270778 61270841 63 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ......x:...............:::.....:.:.x.:..x:..:....x...:.:.xx..:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 43686494 NA +3105 chr4 + 190214555 104957277 104957276 104957390 114 ATACGTATATATGTATATATATACGTATATATATACGTATATATATGTATATATATGTATATATATGTATATATA--------TACGTATATATGTATATATGTATATATATGTGTATATAT chr4 + 94230402 91734576 91734575 91734697 91734576 91734575 91734697 122 ATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ...::x....:.x.x:x...:xxx.:.....x...:..x.x:x....x.xx.....x...::........xx...--------...:x.x...::..:.x.x::.....:...x........ 75M8I39M 75/114 65.8% 122/94230402 0.0% 8/114 7.0% 13222701 NA +3084 chr4 + 190214555 104957281 104957280 104957398 118 GTATATATGTATATATATACGTATATATATACGTATATATATGTATATATATGTATATATATGTATATATATACGTATATATGTATATATGTATATATATGTGTATATATGTATATAT chr4 + 94230402 89812946 89812945 89813060 89812946 89812945 89813060 115 GTTTATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..x.......xx:.:.x.::.---::.....x:..x....:.......x..x:.::x.xx..::..:.::.x..x:x:..::....:.x:x.:.:.:.:.............x..x.. 21M3D94M 71/115 61.7% 115/94230402 0.0% 3/115 2.6% 15144335 NA +3074 chr4 + 190214555 104957333 104957332 104957456 124 GTATATATATGTATATATATACGTATATATGTATATATGTATATATATGTGTATATATGTATATATATGTATATATATGTGTATATATGTATATATATACACACATATATATATACATATATAT chr4 + 94230402 91738172 91738171 91738295 91738172 91738171 91738295 124 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x..:.:.x.x:x..:.xxx::..:..x......x.x:x.:..x:xx.....x...::........xx...x:x:x:.x..::x.x...:.....x.x.:.....:..:x:....... 124M 75/124 60.5% 124/94230402 0.0% 0/124 0.0% 13219161 NA +3196 chr4 + 190214555 104957333 104957332 104957456 124 GTATATATATGTATATATATACGTATATATGTATATATGTATATATATGTGTATATATGTATATATATGTATATATATGTGTATATATGTATATATATACACACATATATATATACATATATAT chr4 + 94230402 91734574 91734573 91734697 91734574 91734573 91734697 124 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x..:.:.x.x:x..:.xxx::..:..x......x.x:x....x:xx.....x...::........xx...x:x:x:.x..::x.x...:.....x.x.:.....:..:x:....... 124M 76/124 61.3% 124/94230402 0.0% 0/124 0.0% 13222759 NA +3511 chr4 + 190214555 104957363 104957362 104957499 137 GTATATATGTATATATATGTG-TATATATGTATATATATGTATATATATGTGTATATATGTATATATATACACACATATATATATACATATATATATATATATATATATATATATAT---ATATATATATACATGTGTGTA chr4 + 94230402 89812946 89812945 89813086 89812946 89812945 89813086 141 GTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTA ..x.......xx:.:.x....-:.....x:..x....:.......x..x:..:x.xx..::..:.::.x..x.x...:::...:.x.x.:.:.:.:.:.:.......:.x..x..x.---:.x.x...:x...x.::.... 21M1I95M3I21M 87/137 63.5% 141/94230402 0.0% 4/137 2.9% 15144417 NA +3037 chr4 + 190214555 104962904 104962903 104962964 61 CATTCATATCCTGATTTTTTTCCTGGTTGTTTTTTGTATTGTTTTTCAGAATTCTCTTGTA chr4 + 94230402 62383016 62383015 62383076 62383016 62383015 62383076 61 CATTAATACTCTGATTTTTTTCATTGTTGTTAAGCAAGTTGTTTTTTATAAGTCTCTTGTA ....x...::............x.x......xxx::x:........:.x..x......... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 42579888 NA +3033 chr4 + 190214555 105010054 105010053 105010121 68 TTTTTTTTTTTTTTTTTTTTTTTTGGATTTCTATCTCCTTCAGTTCAACTCTGATCTTAGTTATTTCT chr4 + 94230402 83035854 83035853 83035921 83035854 83035853 83035921 68 TTTTTTTTTTCCTTTTTTTTTTCCAGGTCTCTATTATTTTCCATTATTCTCTAGATTTAGCTACTTCT ..........::..........:::.:.:.....:x::...x:..xxx....::x:....:..:.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 21974200 NA +3090 chr4 + 190214555 105022425 105022424 105022490 66 TAAGGGTGAGGGGTTTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTG chr4 + 94230402 43031779 43031778 43031839 43031779 43031778 43031839 61 TAGAGATGTAAGGTTTCCT-----TGTGGTTTTTTGTTTGTTTGTTTATTTTTTTGGTTTTTTTTG ..::.:..x::.....::.-----...........x...........:...x....x..x...... 19M5D42M 48/61 78.7% 61/94230402 0.0% 5/61 8.2% 61990646 NA +3297 chr4 + 190214555 105022434 105022433 105022483 50 GGGGTTTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 74136536 74136535 74136585 74136536 74136535 74136585 50 GGGGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTT ................:.x...x..xxx..x................... 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 30885898 NA +3271 chr4 + 190214555 105022442 105022441 105022482 41 TTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTT chr4 + 94230402 22701651 22701650 22701691 22701651 22701650 22701691 41 TTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTT ..x:..................................x.. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 82320791 NA +3259 chr4 + 190214555 105062456 105062455 105062527 72 GCGCCTGTCGTCCCAGCTACTTGGGAGGTTGAGACAGGAAAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x...x..:...........::...:....x.xx.x:..x..........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 29029250 NA +3446 chr4 + 190214555 105099379 105099378 105099460 82 CATGGTGGCACATCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCTAGGAGGTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA-CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..-.x....:.:.:.........::........x.xx.x...x::......:.:..:..x..x:..:..:.. 12M1D69M 56/81 69.1% 81/94230402 0.0% 1/81 1.2% 29066182 NA +3062 chr4 + 190214555 105111395 105111394 105111456 62 CATAAACTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATATCTGGCCCCTAGCAG chr4 + 94230402 41046063 41046062 41046124 41046063 41046062 41046124 62 CATACATTACCAAAAAAAAAAAAAAGTGAAAACAAAAAATGAAATCAATTGGTAATTAACAG ....x.:..................:x:....x......x....x:.x:...:xx:..:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 64065332 NA +3092 chr4 + 190214555 105113251 105113250 105113309 59 TTGTAAAAAAAAAAAAAAAAAAAAAAAAAAGACATGGAGACAATCAGGGACATTTGGAT chr4 + 94230402 21774136 21774135 21774194 21774136 21774135 21774194 59 TTGTATCAAAAAAAAAAAAAAAGGAGAAAAGACATAGTGAGAATCACAAACAGTTACAT .....xx...............::.:.........:.x..x.....x::...x..:x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 83339115 NA +3320 chr4 + 190214555 105113258 105113257 105113329 72 AAAAAAAAAAAAAAAAAAAAAAAGACATGGAGACAATCAGGGACATT---TGGATATGGATGGATTATATATTAA chr4 + 94230402 41925063 41925062 41925137 41925063 41925062 41925137 75 AGGAAAAAAAAAACAAAAAAAAACACAGGGAGACAATCAGGTACATCACGTGAAAGTGAAGGAATAACAGAGTAA .::..........x.........x...x.............x....:---..:.x:..:.x.:..x.:.x.x... 47M3I25M 55/72 76.4% 75/94230402 0.0% 3/72 4.2% 63188195 NA +3085 chr4 + 190214555 105123435 105123434 105123504 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 29090238 NA +3100 chr4 + 190214555 105143369 105143368 105143474 106 GTTTCAAAAAAAAAAAAAAAGAAAGAAAGAAAGAACATTTTCTATTCTGCAGGTGGGAGGAAATGAAGAATGCACCTATTATTTTTGTGTTAGTACAACATAAAAA chr4 + 94230402 37687759 37687758 37687862 37687759 37687758 37687862 104 GTTTCAGAAAAAAAAAAAAAAAAGGGAACAGAAAACATTTTGTACCAAGCAGAAGATGAGTAAACATTTATGTTCTCAGTATTTCCATAT--GTAAAGCAGAACAA ......:.............:..:.:..x.:.:........x..::xx....:x.:x::.x..xx.xxx...:x.::.x.....:::.:.--...x.:..x..x.. 90M2D14M 67/104 64.4% 104/94230402 0.0% 2/104 1.9% 67455610 NA +3251 chr4 + 190214555 105152550 105152549 105152614 65 AAAAAAGTATAATCTATTTTCTTTTCCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 44980290 44980289 44980354 44980290 44980289 44980354 65 AAAGGAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ...::.:.:..:.::....xx::............::.::x::.....:......:......... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 60172260 NA +3609 chr4 + 190214555 105173402 105173401 105173475 74 GTGCTCCCGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGATTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x:.....:...........::........x.xx.x...x.:x..........:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 29140198 NA +3154 chr4 + 190214555 105200610 105200609 105200658 49 TAACTCCCAGGTCACACTGTTTTTTTTTGTTTGTTTTGTTTTTGTTTTT chr4 + 94230402 28062616 28062615 28062664 28062616 28062615 28062664 49 TGGCCCTTGGGTTATACAGTTTTTTTTTGTTTGTTTTGTTTTTGGTTTT .::.:.:::...:.:..x..........................x.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 77137994 NA +3038 chr4 + 190214555 105204216 105204215 105204261 46 AAAAAAAAAAAAAATATATACACACACACACACACACACACACACA chr4 + 94230402 67195532 67195531 67195577 67195532 67195531 67195577 46 AAGGAAAAGAAAGGTATATACACACACACACACACATATATATATA ..::....:...::......................:.:.:.:.:. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 38008684 NA +3245 chr4 + 190214555 105204216 105204215 105204269 54 AAAAAAAAAAAAAATATATACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ............:...x.........xx:.x....:....::..x:........ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 49474723 NA +3110 chr4 + 190214555 105209015 105209014 105209087 73 CACATCAGAAATGAAATAGATGCCTCAAGGCATGGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 74404209 74404208 74404281 74404209 74404208 74404281 73 CACAACAGATATTAAGGAAATGATTGAAAGAAGGGTATATATATATAGATATATGCATTCACATACAAAGATA ....x....x..x..:x.:...x:.x..:.x.x..............x......::..x:.:...:.x.x... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 30804806 NA +3532 chr4 + 190214555 105212850 105212849 105212932 83 CATGGTGGCACGTGCCTGTAGTCCCAGATACTTGGATGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--......:....x......:.x.......x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 29179653 NA +3191 chr4 + 190214555 105233255 105233254 105233326 72 GCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.::..........::........x.xx.x...x::........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 29200049 NA +3465 chr4 + 190214555 105259123 105259122 105259186 64 CACCTATAGTTCCAGCTATTTGGGAGGCTGAGGCGGGAAGATCACTTGAGCCCAGAAGTTCAGG chr4 + 94230402 76033207 76033206 76033270 76033207 76033206 76033270 64 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG ...x.:............:...::........x.xx.x::.x.......:........:.:x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 29225916 NA +3051 chr4 + 190214555 105293293 105293292 105293412 120 AAAACTTAAAGTATAATAATAATTTTTAAAAAAACTAGAAAAAAAAATACAGCCTCCCCCCTCCAAAAAAAAAAAAAAAAAAAAAAAAGAATCCTCCATTTTCAGGAAGGGAAAAAAGAG chr4 + 94230402 71419144 71419143 71419257 71419144 71419143 71419257 114 AAAAGGCACAAAACAACAGCACTTCTTAAAACTGCCAAAAAACAAACATCCCCCCCCCCCCCCCCAAAAAAAAACAAAAAACAAACCAAA------CACAAACAGCAGGCAAAAAAAAAG ....xx:.x.:x.:..:.::.x..:......xx:.:.:....x...xxx.xx..:......:..x.........x......x...xx.:.------..:xxx...x.:.x:......:.. 90M6D24M 74/114 64.9% 114/94230402 0.0% 6/114 5.3% 33874149 NA +3132 chr4 + 190214555 105293293 105293292 105293378 86 AAAACTTAAAGTATAATAATAATTTTTAAAAAAACTAGAAAAAAAAATACAGCCTCCCCCCTCCAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 71423238 71423237 71423323 71423238 71423237 71423323 86 AAAAGGCACAAAACAACAGCACTTCTTAAAACTGCCAAAAAACAAACATCCCCCCCCCCCCCCCCAAAAAAAAAACAAAAAACAAA ....xx:.x.:x.:..:.::.x..:......xx:.:.:....x...xxx.xx..:......:..x..........x......x... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 33870055 NA +3386 chr4 + 190214555 105293293 105293292 105293384 92 AAAACTTAAAGTATAATAATAATTTTTAAAAAAACTAGAAAAAAAAATACAGCCTCCCCCCTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAT chr4 + 94230402 3817444 3817443 3817521 3817444 3817443 3817521 78 AAAGCTTAAGGCA--------------AGAAAAACAAAAATTAGAAATAAAACACCCCCCCCCCCCAAAAAAAAAAGGAAAAAAAAAAGCAT ...:.....:.:.--------------.:......x.:..xx.:.....x.:.x:......:..xx..........::...........x.. 13M14D65M 59/78 75.6% 78/94230402 0.0% 14/78 17.9% 101475849 88738706 +3077 chr4 + 190214555 105294245 105294244 105294313 69 AGACTAGGAAGCTCCAAGTCTTCACTTCCCCATGGAAACACTTTTAAA-AAAAGAAAAAAAA----AAAAAAAC chr4 + 94230402 42779867 42779866 42779940 42779867 42779866 42779940 74 AAAATAAGAAGCTTCAAGTCTTATCTCCCCCATGGAGAGATCTTGAAATGAAAGAGGAAAAATTTTAAAGAAAC .:.x..:......:........xx..:.........:.x.::..x...-:.....::.....----...:.... 48M1I13M4I8M 53/69 76.8% 74/94230402 0.0% 5/69 7.2% 62514378 NA +3752 chr4 + 190214555 105295959 105295958 105296042 84 GTGTGTGTGTATATATGTG--TGTGTATACACACACATATATACACACACACACACATATATACAC-ACACATATATATACACACAC chr4 + 94230402 79265523 79265522 79265609 79265523 79265522 79265609 87 GTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC .........:..:.:....--...:......:....:.:.::....:..x...:.:x.:.:.x...-....x.x......x.::... 19M2I45M1I20M 62/84 73.8% 87/94230402 0.0% 3/84 3.6% 26030436 NA +3075 chr4 + 190214555 105295965 105295964 105296036 72 GTGTATATATGTGTGTGTATACACACACATATATACACACACACACACATATATACACACACATATATATAC chr4 + 94230402 54963190 54963189 54963261 54963190 54963189 54963261 72 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC ..x.:.....x::.:::x..:.....x:.....:.........xx...:.::::x..:.....:..x..... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 50332775 NA +3079 chr4 + 190214555 105295967 105295966 105296115 149 GTATATATGTGTGTGTATACACACACATATATACACACACACACACATATATACACACACATATATATACACACACACATATATATACACACACTAGAATATTATTCAAATTCTTCA------AAGAGGAAGAAAATTATTCTAAAAGGAAGGAA chr4 + 94230402 54963190 54963189 54963337 54963190 54963189 54963337 148 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACA-TGGAACAACTGCAGAACTCATTATTAGCCCAAAGGCAGAAaa------agaaaggaagaaa ..x.:...:.x::.::.x.::.....x................xx..::.:::.x..:...:.:..x..:..:x.xx:x.x.x.x....:...-.:...:.x:xx:x:..:..x.:.------x.:...x......------x:........:.. 93M1D23M6I13M6D13M 89/142 62.7% 148/94230402 0.0% 13/142 9.2% 50332777 NA +3757 chr4 + 190214555 105295976 105295975 105296053 78 TGTGTGTATACACACACATATATACACACACACACACATATATACACACACATATATA-----TACACACACACATATATATA chr4 + 94230402 23247723 23247722 23247805 23247723 23247722 23247805 83 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA .........:.........x...:x...:.:::.....:...:.........x:x.x.-----....::x.:.x......... 58M5I20M 59/78 75.6% 83/94230402 0.0% 5/78 6.4% 82048253 NA +3037 chr4 + 190214555 105295995 105295994 105296045 51 ATATACACACACACACACATATATACACACACATATATATACACACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .....:.:........x.x:.:..........:.:........x..x:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 59155139 NA +3045 chr4 + 190214555 105319347 105319346 105319482 136 AAAAAGAAGGGAAAGGGAAAGGGAAATAAAAAAAGAAAAAGGGAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAAAAAAGAAAAAGAAAAAAGTGTTGGTAAGGATTTGAAGACTGAAA chr4 + 94230402 79081202 79081201 79081335 79081202 79081201 79081335 134 AAAAAGAAGAGTGTAATGAATGGATACATCAAATTTAGGTGTAAAAAAGAAATGGCAAATTGCATGTGGAGGAAAAAAAAAAAAAAAAGGAGAAAATATGGAGACAGATGGATTTATATAAATTC--AGATTGTAA .........:.x:x::x:..x...x.:.xx...xxx.::x.x:...:.:...x:.x...xx.x.x.x.:..........:..:......:.:....x.x::...x.:.x.x:..x:..x::...:--...:..x.. 125M2D9M 81/134 60.4% 134/94230402 0.0% 2/134 1.5% 26238145 NA +3316 chr4 + 190214555 105319359 105319358 105319429 71 AAGGGAAAGGGAAATAAAAAAAGAAAAAGGGAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAG chr4 + 94230402 84536568 84536567 84536636 84536568 84536567 84536636 69 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAG--GGAAAGGGAGAGGAAGAAG ..............x.......x..x..:::x.:...:x:.......:..--:..:.:...:.::...... 50M2D19M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% 20782791 NA +3213 chr4 + 190214555 105319377 105319376 105319445 69 AAAAGAAAAAGGGAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAA--AGAAGAAAAAGAAAAAAAGAA chr4 + 94230402 89501684 89501683 89501754 89501684 89501683 89501754 71 AAAACAAAAAGGGAAAGAGAAAGAGAAACAAGAGAGGGCAGGAGGGGATTGGAATAAAGTGAAAAAACAAA ....x.............:...:.....x:...:..:.x....::::.--:...x...:x.......x:.. 48M2I21M 51/69 73.9% 71/94230402 0.0% 2/69 2.9% 15817693 NA +3060 chr4 + 190214555 105319379 105319378 105319465 87 AAGAAAAAGGGAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAAAAAAGAAAAAGAAAAAAGTGTTGGTAA chr4 + 94230402 49200002 49200001 49200088 49200002 49200001 49200088 87 AAGGAGAAGAAAAAAAAAAAAAAAAAAGGTTGCTATATAGAGGAACAGAATAAGGAGAGAAGCCAAAAAGGAGAAAAATGCTTCTAA ...:.:...::...:.......:.....:xx:xx.x.x:..::..x....x..::...:..:xx:....:..:....:..:.xx... 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 56119377 NA +3153 chr4 + 190214555 105319384 105319383 105319446 63 AAAGGGAAAGAA--AAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAAAAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x...:..:--.x....:..:::.::....:..:.......:....:..........x.:.. 12M2I51M 47/63 74.6% 65/94230402 0.0% 2/63 3.2% 76304711 NA +3030 chr4 + 190214555 105319389 105319388 105319438 50 GAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAA chr4 + 94230402 44890395 44890394 44890444 44890395 44890394 44890444 50 GGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAA .:..:.......:..:.....:.........:...x.x.xx......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 60428994 NA +3446 chr4 + 190214555 105319389 105319388 105319491 103 GAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAAAAAAGAAAAAGAAAAAAGTGTTGGTA----AGGAT-TTGAAGACTGAAACCCCTGTGC chr4 + 94230402 24434180 24434179 24434287 24434180 24434179 24434287 108 GAATAAAAAAAAAAAAAGTCATAGAGAAGGAGATGACTGAGAAAAGGAGTAAAATAAAAAAAAAGTAATATAAACAAACCAGAATGTTGAAGAATAAATCCACTCTGC ...x:.......:.....xx.x.........:.x:.xx:......:..:x....x.....:...:x.:.:.x:::.----..:..-.......x.:..x..x..x... 76M4I5M1I22M 72/103 69.9% 108/94230402 0.0% 5/103 4.9% 80885209 NA +3115 chr4 + 190214555 105319401 105319400 105319458 58 GAAAAGAGAAAGAGAAGGAAAAAAAGAAGAAAAAGAAAAAAAGAAAAAGAAAAAAGTG chr4 + 94230402 56923931 56923930 56923988 56923931 56923930 56923988 58 GAGTGGGGAAACAAGAGAAAAAAAAGAAGAAAAAGAAATAAAGTTAAAAACAGAAGTG ..:x:.:....x.::..:....................x....xx...:.x.:..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 48395470 NA +3157 chr4 + 190214555 105336685 105336684 105336767 83 CGTGGTGGGGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....x...:.--....:.:...........::........x.xx.x...xx:........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 29303488 NA +3052 chr4 + 190214555 105347519 105347518 105347581 63 ACTTCATATATTTATTTTTCTATAAATTGTTTTTATTATTTACATTACTAAGTACTATATGGC chr4 + 94230402 56436798 56436797 56436860 56436798 56436797 56436860 63 ATTTCATTTATTTATTTTTCTCTGAAATACTGTTATTATTTACTAACCCAAGCATAATATGGC .:.....x.............x.:..x.::.x...........xxxx.:...:.:x....... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 48910721 NA +3117 chr4 + 190214555 105385413 105385412 105385458 46 AAAAACAAAAAACAAACAAACAACAACAAAAAAACAAACAAAAAAA chr4 + 94230402 18731819 18731818 18731864 18731819 18731818 18731864 46 AAGGAGAAAAAACAAACAAGCAATAACAAAATAACACACAAAAAAA ..::.x.............:...:.......x....x......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 86653594 NA +3161 chr4 + 190214555 105385414 105385413 105385469 56 AAAACAAAAAACAAACAAACAACAACAAAAAAACAAACAAAAAAAACAATAAATTA chr4 + 94230402 79648968 79648967 79649023 79648968 79648967 79649023 56 AAAACAAAAAACAAACAAACAACAACAACAAAAAAAACTGAAGGGTTTTTAAGTTA ............................x....x....x:..:::x:xx...:... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 25736446 NA +3103 chr4 + 190214555 105402974 105402973 105403033 60 AAATTCTTTCTTTTTCTTTCCTCTTTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 84992640 84992639 84992699 84992640 84992639 84992699 60 AAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACT ....::::::.....:......:......:.....:..::.x..x:..:......:.x.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 20410334 NA +3364 chr4 + 190214555 105403012 105403011 105403061 50 TTCTCTCTCTCTCTCTCTCTCTTTCTTTTTTGACACAGTGTCTTGCTCTG chr4 + 94230402 38525379 38525378 38525428 38525379 38525378 38525428 50 TTCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTG ....:.:......:..........:.......:x.....:.:...:.:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 66877633 NA +3694 chr4 + 190214555 105423886 105423885 105423992 107 CAAAACAGTTCCCAACAGCAGTTGGA--CCATCAAAATCATGGAAGTAAGGAAAGAAGAAAGGA--------GGGAAGGAAGGAGTGAAAGGAAGAGGAAGAAAGTGAAAGAGAGGT chr4 + 94230402 48632578 48632577 48632693 48632578 48632577 48632693 116 CAGAACTGCTCCCCAGTGCAGCTAGAAGCCAGTATC-TCATGCTAATACAGAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGATGT ..:...x.:....x.xx....:.:..--...x:.xx-.....xx.:..x:.....x........--------..:..:..:...:..:.......x.......x.x:.......x.. 26M2I8M1D27M8I45M 78/106 73.6% 116/94230402 0.0% 11/106 10.4% 56791308 NA +3372 chr4 + 190214555 105429824 105429823 105429905 82 AAAGTAAAACATAATAGAGTA-------AAGCCTTAAGAAAATAATAAATGATATTGACAAAACAGGTTTCATAAAATATTTCAAAAAT chr4 + 94230402 77950741 77950740 77950829 77950741 77950740 77950829 89 AGATTAAAAAATGATAGAGAAGCAAAAAAACCCACAAAAAACAAACAAACAACAACAACAAAACAGTCTTCATAAAATCTTTCAGAAAT .:.x.....x..:......x.-------..x..x:..:...xx..:...::.:.x::.........x:..........x.....:.... 21M7I61M 60/82 73.2% 89/94230402 0.0% 7/82 8.5% 27479083 NA +3118 chr4 + 190214555 105449231 105449230 105449276 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAATATTAT chr4 + 94230402 63630133 63630132 63630178 63630133 63630132 63630178 46 AGAAAGGAAAAAAAAAAAAAAAAAGAGGAAATACTTAAAATATTAT .:...::.................:.::...x.:............ 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 41819098 NA +3076 chr4 + 190214555 105494534 105494533 105494580 47 AACAAAACAAACAAACAAACAAAAAACATGGAAAAGAATATTAATTC chr4 + 94230402 22471338 22471337 22471384 22471338 22471337 22471384 47 AGTAAAACAAACAAACAAACAAAAAACAGTAAAAAGAGTATTGGTCC .::.........................xx:......:....::.:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 83023196 NA +3491 chr4 + 190214555 105494773 105494772 105494855 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........::::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 29461576 NA +3068 chr4 + 190214555 105494916 105494915 105494971 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 103999916 86214639 +3121 chr4 + 190214555 105494918 105494917 105494971 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 15464842 NA +3282 chr4 + 190214555 105494918 105494917 105494973 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 103999918 86214637 +3014 chr4 + 190214555 105494920 105494919 105494978 59 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472490 51472489 51472548 51472490 51472489 51472548 59 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 54022430 NA +3496 chr4 + 190214555 105494920 105494919 105494975 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 103999920 86214635 +3282 chr4 + 190214555 105494922 105494921 105494977 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 103999922 86214633 +3694 chr4 + 190214555 105494927 105494926 105495010 84 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATACATACATACATATAAATTTTA chr4 + 94230402 85548420 85548419 85548494 85548420 85548419 85548494 75 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT---------CAGACATGGATATCCATTTTA .............:.:x.....:...:.:.:.::...:..........x.....---------..x....:x....xx...... 54M9D21M 59/75 78.7% 75/94230402 0.0% 9/75 12.0% 19946507 NA +3131 chr4 + 190214555 105494931 105494930 105494983 53 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548420 85548419 85548472 85548420 85548419 85548472 53 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA .............x.xx.....:...:.:.:.::...:..........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 19946511 NA +3132 chr4 + 190214555 105509264 105509263 105509357 94 TAGGGGATAAAAAGGAGAAAAGAAGGGGAGG-------GAAGGGGAAGGGAGGGGAAGGAAAGGGAGGGGGAGGAGAGGGAGGGGAAGAAAAGGGAGGGGA chr4 + 94230402 75729022 75729021 75729122 75729022 75729021 75729122 101 TAGTGAACTGGAAAGAGATGTGGCAGAGAGAAATTGTAGATGGAGTAAAGGGGGGAAAAAAAAGGAGGGGGGGGGGGGGGATGGAAAGGCAAAGGGAGTGA ...x.:.:x::..:....x:x.:x:.:...:-------..x..:.x.::.:......::...:........:..:.:....x..:...:x..:..::.x.. 31M7I63M 59/94 62.8% 101/94230402 0.0% 7/94 7.4% 29780242 NA +3055 chr4 + 190214555 105509290 105509289 105509341 52 GGAGGGAAGGGGAAGGGAGGGGAAGGAAAGGGAGGGGGAGGAGAGGGAGGGG chr4 + 94230402 66907847 66907846 66907898 66907847 66907846 66907898 52 GGAGGTGGGGGAGAGAGGAGGGAGGGAAAAGGAGGGTGAGGAGTGGCAGGGG .....x::...::..:.::....:.....:......x......x..x..... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 38601443 NA +3109 chr4 + 190214555 105511593 105511592 105511658 66 TCCATTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 9891155 9891154 9891220 9891155 9891154 9891220 66 TCCATTGCATCAGTGTGTGTTTATATATCTATATACCTATATATGTATATCCATGATCATTTCTAT .......::.xx........x.......x......:x.......:.....x:..:xx:..x.x... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 95620438 NA +3188 chr4 + 190214555 105535130 105535129 105535194 65 AAAGTT-CTTTTTCTAAAAAAAAAAAAAAAAAAAACAAAAAACTAAGAAAACACCCATTTAGAACC chr4 + 94230402 41867171 41867170 41867236 41867171 41867170 41867236 66 AAAGTTACCTTATTTAAAAAAATAAAACAAAAAAACAACAAACAAAACAAACAACTATTTTTAACC ......-.:..x.:........x....x..........x....x..:x.....x.:....xx.... 6M1I59M 52/65 80.0% 66/94230402 0.0% 1/65 1.5% 63667959 NA +3290 chr4 + 190214555 105535144 105535143 105535191 48 AAAAAAAAAAAAAAAAAAAACAAAAAACTAAGAAAACACCCATTTAGA chr4 + 94230402 80737302 80737301 80737349 80737302 80737301 80737349 48 AAAAAAAAAAAAAAAAAAAGGACAAAACCAAGTAAACATCTATTTAGA ...................:x.x.....:...x.....:.:....... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 24797842 NA +3423 chr4 + 190214555 105574980 105574979 105575032 53 ATATATATATGTACACACATACACACACATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:....:........x:.::x......:........:........... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 82327258 NA +3347 chr4 + 190214555 105589899 105589898 105589980 82 CATGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATTGCTTGAACCCGGGAGACAGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::....::....--....:.:...........::.:......x.xx.x...x::.........:.:..x:xx:..:..:. 14M2D66M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 29556702 NA +3069 chr4 + 190214555 105590012 105590011 105590099 88 TGGGCAACAGAGTGAGACTCTGTCTCAAAAAAAAAAAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 8373266 8373265 8373353 8373266 8373265 8373353 88 TGAGATACAGATTTATTTTCTTTATCGACAAAGCACAGAAAGAGCATGGGGAGAAGGAAGGAAGAAGGCAGGCATGGAGGAAGGAAAG ..:.xx.....x.x.xx:...x.x..:.x...:x.x...:...:x:x::.:.:...:...:.......x...x.x.:.........:. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 97216746 92997809 +3385 chr4 + 190214555 105590039 105590038 105590143 105 AAAAAAAAAAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAAAAAA chr4 + 94230402 49044722 49044721 49044826 49044722 49044721 49044826 105 AGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAA .:...:::.....xx..........:..:::x....:.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:....::x:..x..x..:x.x.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 56545317 NA +3375 chr4 + 190214555 105590047 105590046 105590110 64 AAGAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 26216011 26216010 26216074 26216011 26216010 26216074 64 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ..x..x...................x::.:...::::..:.....x:..:...:::.....x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 79374036 NA +3488 chr4 + 190214555 105618492 105618491 105618550 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.:...........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 29585286 NA +3049 chr4 + 190214555 105642852 105642851 105642930 79 TTTCAAAGATTAAATAAGTTAGCATTTGATAATAAAAATTCAAAAGAAATTCTGATTATATTCATGTAGATAATATGAT chr4 + 94230402 69170267 69170266 69170345 69170267 69170266 69170345 79 TTTGGGAAACTGTAAAAGTTAACATTTGACAATAATGTTTCAAAAAAACTTATGACAATATGCATGAATTTACTGTAAT ...x::.:.:.:x.x......:.......:.....x:x.......:..x..x...:x....x....x.xx..x.:.:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 36472585 NA +3171 chr4 + 190214555 105673662 105673661 105673731 70 AGGTAGGTAGGTAGAAAACAAAAATGGAAGGAAGGAAAGAAGGAAGAAAGGAAGAGAGGAAGATGGGAGG chr4 + 94230402 61867132 61867131 61867192 61867132 61867131 61867192 61 AGCTAGGCGAGAAGAAATCAGAAGTGGAAGGAAGATAAGAAGGCAG---------GAAGAAGATGGGAGG ..x....:::.x.....x..:..:..........:x.......x..---------..:............ 46M9D15M 49/61 80.3% 61/94230402 0.0% 9/61 14.8% 43806530 NA +3266 chr4 + 190214555 105689770 105689769 105689848 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:...........::........x:xx.x.:.x::.....:..::.:..x.:x:.....:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 29656569 NA +3631 chr4 + 190214555 105742671 105742670 105742734 64 CTATTAGTACTTTCTCTTTTTTTGTTGTTGTTTTTACTTTTTTTTTTTTTTTTTATTTCTTAGA chr4 + 94230402 42595709 42595708 42595772 42595709 42595708 42595772 64 CTGTCAATACTCTGGATTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTTCCCTGGA ..:.:.:....:.xxx................x:.:.:................x..:.:.:.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 63146962 NA +3041 chr4 + 190214555 105750452 105750451 105750505 54 CTCCGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGTAACAACACTGAATGCTGAC chr4 + 94230402 64725363 64725362 64725416 64725363 64725362 64725416 54 CTCCACCTTAAAACAAAAAAAAAAAAAAGAAAAATCTCAACAGAGTATGCTCAC ....::..:....x...................:.xx.....xx.x.....x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 41025089 NA +3048 chr4 + 190214555 105756489 105756488 105756565 77 TGCACATACACACACACACACACACACACACACACACACGTATATACATATATACGCATACATATATGTATATATAT chr4 + 94230402 74526053 74526052 74526129 74526053 74526052 74526129 77 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..:.x..xx.x.x....xx.x.:x..............:.x.:.....:.x...:::.:::..........x..x.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 31230436 NA +3126 chr4 + 190214555 105756501 105756500 105756553 53 CACACACACACACACACACACACACACGTATATACATATATACGCATACATAT chr4 + 94230402 74526077 74526076 74526129 74526077 74526076 74526129 53 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..............::x...:.....x:.......:......:.:..x:.x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 31230424 NA +3195 chr4 + 190214555 105756501 105756500 105756586 86 CACACACACACACACACACACACACACGTATATACATATATACGCATACATA--TATGTATATATATGTGTGTGTGTGTGTGTATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x.:x..x:x.x.......:.:x:.:..:..x.:.:.:.......x.--.........x.:.......:.:..::..:.::.. 52M2I34M 58/86 67.4% 88/94230402 0.0% 2/86 2.3% 83156320 NA +3158 chr4 + 190214555 105831800 105831799 105831878 79 GTGGTGGGCAGCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--..xx....:.:...........::........x.xx.x...x::.........x.:..x:xx:..:..:.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 29798599 NA +3128 chr4 + 190214555 105867457 105867456 105867535 79 CACCTGTAGAGCCAACTACTTGGGAGGCTGAGGTTAGAGGATTGCTTAAGCCCAGGAATTCGAGGCTGCAGTGCACTAT chr4 + 94230402 76033207 76033206 76033285 76033207 76033206 76033285 79 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGAT ...x.....xx...:.......::........x::x.x.:.x::...:.:.....:.::.:x:.....:..x:..:x.. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 29834250 NA +3250 chr4 + 190214555 105928477 105928476 105928542 66 GTGGCTCATGCTTGTAATCCCAGCTACTCAAGAAGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:x..:.--....:.:.........::.:.:......x.xx.x...x.............:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 29895276 NA +3027 chr4 + 190214555 105928583 105928582 105928652 70 AGCCTAGGCAACAAGAGCGAAACTCTGTCTCAAAAAAAAAAAAAAAAAGAAAAAAAAATCATTATTAGGA chr4 + 94230402 39858756 39858755 39858825 39858756 39858755 39858825 70 AGGTCAGATATTAATGGGAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAATCTTATTTGGA ..x::..::.x:..x:.x:..:........x..............x..x....x....x:x.....x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 66069827 NA +3221 chr4 + 190214555 105942087 105942086 105942165 79 GAATATATATGTGTGTGTCTGTGTGTGTGTATATATATATATATATATA--TACACACATATATATTTGTTATTTGGAAAA chr4 + 94230402 70094139 70094138 70094219 70094139 70094138 70094219 81 GGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACATTCTAGAAAA .::.:..x..:.......:...x...x.....:.....:......x.:.--.x..:.x........x:::xx.:.:..... 49M2I30M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 35847948 NA +3122 chr4 + 190214555 105942099 105942098 105942162 64 GTGTGTCTGTGTGTGTGTATATATATATATATATATATACACACATATATATTTGTTATTTGGA chr4 + 94230402 55892185 55892184 55892248 55892185 55892184 55892248 64 GTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATAAAACTTTGATACTAGAA ......:...:.:.x...:.x......:....x...:....:.....x.xx....x..:.x.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 50049914 NA +3138 chr4 + 190214555 105942099 105942098 105942156 58 GTGTGTCTGTGTGTGTGTATATATATATATATATATATACACACATATATATTTGTTA chr4 + 94230402 68837095 68837094 68837152 68837095 68837094 68837152 58 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCA .....:x............:.:.:.x...:...:...:...::..:.:..x...:.:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 37105004 NA +3366 chr4 + 190214555 105953030 105953029 105953108 79 GTGGTGCACACCTGGAATCCCAGCTACTCGAGAGGCTGAGACAGGAGAATTGCTTGAACCCGGGAGGCAGAGATTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--..x.:.:.........:..:........x.xx.x...x::.........:.:..x:xx:.::..... 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 29919829 NA +3021 chr4 + 190214555 105963096 105963095 105963154 59 GCACCTGTAGTCCCAGCTACTCAGTAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:::x........x.xx.x...x.:.....:..::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 29929890 NA +3040 chr4 + 190214555 105971376 105971375 105971429 54 AATAAATCATTAAGCCTTTGAGTAACGGCAGAATATATGGCTGTAGATCCATTT chr4 + 94230402 55850878 55850877 55850931 55850878 55850877 55850931 54 AAAATATCATAAAGCCTTGAAGCAATGGCAGGACATATGGTTCTAGATCCAGTT ..x.x.....x.......x:..:..:.....:.:......:.x........x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 50120498 NA +3417 chr4 + 190214555 105994497 105994496 105994613 117 AGCTGAAGTGTAGCAAGATGCACTAAGAATAAGGATTATTCTTCTTACGATTTTATAGAGGAGAAAGTTTGGGGCCAGAGAGGTTAAGTAAGTTGCCCAAGGTCACACAGTTAGTGA chr4 + 94230402 82283080 82283079 82283195 82283080 82283079 82283195 116 AACTGGGATTTCACAAAGTTCCTTCAAGGTTAGCATTGT-ATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGA .:...:::.x.x:...::.x.x:.x.:::.x..x...:.-x..x.x.:x....:...x.x.:.:..::.x..:xx...:x..:......:.x.x:..:................... 39M1D77M 73/116 62.9% 116/94230402 0.0% 1/116 0.9% 23711417 NA +3181 chr4 + 190214555 106045682 106045681 106045743 62 CCTCCTTCTTTTGTTCCTTCTTTTCTCTTCATCCCCTCCCTCCTTCCCTCATTCTCTTCCTT chr4 + 94230402 7218317 7218316 7218377 7218317 7218316 7218377 61 CTTTTTTTTTTTCTTTTATCCTTTCCCCCC-TCCCCCCCCTCCTCCCCCCATTCTCTTCCCT .:.::..:....x..::x..:....:.::.-.....:.......:...:...........:. 30M1D31M 45/61 73.8% 61/94230402 0.0% 1/61 1.6% 98827365 91387190 +3158 chr4 + 190214555 106085235 106085234 106085290 56 AAGGGATGGAGGAAAATTTACCAAGCAAATGGAAAGAAAAACAAAACAAAACAAAA chr4 + 94230402 45391665 45391664 45391720 45391665 45391664 45391720 56 AAAGAAAAAAGGAAATTTTTCCCAACATATGGGGAAAAAAACAAAACAAAACAAAA ..:.:.x::......x...x..x.:..x....::.:.................... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 60693570 NA +3079 chr4 + 190214555 106102040 106102039 106102110 71 TTAACATTTCATGTTTCTATCTTCTAAAAGCAAACAAAAAAACGTGATTTCAACAAAAACTGT------TGTTTTGC chr4 + 94230402 74665132 74665131 74665207 74665132 74665131 74665207 76 TTATTATTTTTTTTTCATATCTTCTAAAAGGAAAAAAAAAAACGTGTTTTC-ACAAAATCAGTCATAAATATTTTGC ...x:....:x.x..:x.............x...x...........x....-......x.x..------.:...... 51M1D11M6I8M 57/70 81.4% 76/94230402 0.0% 7/70 10.0% 31436908 NA +3414 chr4 + 190214555 106117874 106117873 106117969 96 CAGTGG-GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAACATAGTGCCA chr4 + 94230402 76033199 76033198 76033289 76033199 76033198 76033289 91 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......-..:.x......:...........::........x.xx.x...xx:.x.......:.:..x:xx:.x:..:..------.....::..... 6M1I72M6D12M 65/90 72.2% 91/94230402 0.0% 7/90 7.8% 30084675 NA +3576 chr4 + 190214555 106131473 106131472 106131555 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:...........::........x.xx.x...x::......:....:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 30098276 NA +3600 chr4 + 190214555 106145187 106145186 106145260 74 GTGAGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:.x......:...........x:........x.xx.x...x::...........:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 30111983 NA +3015 chr4 + 190214555 106160582 106160581 106160627 46 AGAAGAAAAAAAGAAAAAAAATCAAAATAGAAAAGTGTTCGCAAGT chr4 + 94230402 22367303 22367302 22367348 22367303 22367302 22367348 46 AGCAGAAAAAAAAAAAAAAAATAGAAACAGAAAAGTATTTTCAAGT ..x.........:.........x:...:........:..:x..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 83793279 NA +3309 chr4 + 190214555 106271628 106271627 106271694 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 30238417 NA +3200 chr4 + 190214555 106292430 106292429 106292499 70 CATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAAAAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......x:..--......:.........::..........x.xx.x...xx:.x.......:.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 30259233 NA +3691 chr4 + 190214555 106297811 106297810 106297928 118 CTATGTGACCTCAGGGAAATTTTCTAACCTCTCTATGCCAGATTTTTTCTGTAAGATGAAGAGAAGAATAGCCACCTGCCTCACAGGGTTGTTGTGAGGTTGAAATGAGTTAATATAT chr4 + 94230402 33474158 33474157 33474272 33474158 33474157 33474272 115 CTGTATGGCCTCAGGGAAGTCATTTAGCTTCTCTGTACCTCAGTTCTTCTGTAAAATGGAGATAAG-ATTTCCACT--CTTCATGATGGCATTATAAGAAAGAAAAAGCCTAAGATAT ..:.:..:..........:.:x.:..:.:.....:.:..xx.x..:........:...:...x...-..xx....:--.:...:::x.x::..:.:..:xx....x::x:...x.... 66M1D9M2D40M 75/115 65.2% 115/94230402 0.0% 3/115 2.6% 72823653 NA +4033 chr4 + 190214555 106297817 106297816 106297939 123 GACCTCAGGGAAATTTTCTAACCTCTCTATGCCAGATTTTTTC----TGTAAGATGAAGAGAAGAATAGCCACCTGCCTCACAGGGTTGTTGTGAGGTTGAAATGAGTTAATATATAATAAAGGCCT chr4 + 94230402 83501141 83501140 83501266 83501141 83501140 83501266 126 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCT-AAATCAATTCCTGTTTATTCAGGATCT ...::::..x.....x::......x.x.:....xx.x....:.----.....:...:..xx:.x.:..:::....:..........x.:........:.-....x.:..xx.:.x..x.x.:.::.. 43M4I52M1D27M 82/122 67.2% 126/94230402 0.0% 5/122 4.1% 22796676 NA +3083 chr4 + 190214555 106300815 106300814 106300897 83 TGAAAGCCAAGTACACTGGCTCACACCTATAATCCCAGCTACATGAGAGGCTGAGACGGGAGGATCACTTTAAGCCAGGAGTT chr4 + 94230402 76033184 76033183 76033266 76033184 76033183 76033266 83 TGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......xxx::.....x.xxx::...x.:..:.:........x...:........x.xx.x.:.x.....x..x....:..:. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 30267631 NA +3229 chr4 + 190214555 106359722 106359721 106359791 70 TAAGAAAGAAAACAGAAAAGGAAGAAAGGAGAAAGGAAGGAAGGAAGGCAAGCAGGAGTAAGGAAAGAAG chr4 + 94230402 48632620 48632619 48632689 48632620 48632619 48632689 70 TAATACAGAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAG ...x.x.....:......:.:....x.:.:....:..:....x.:.:.x...::.:..x.x.:...::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 57727102 NA +3060 chr4 + 190214555 106361101 106361100 106361177 77 TCTGAATTTTATAAAGCATTTTAGATGATTTATTCCTTCTGCAAATATTTATTGAGGGTCTACTTTGTTCTAGGCAT chr4 + 94230402 60763946 60763945 60764022 60763946 60763945 60764022 77 TCAGAATGTTGTTGAGGTTTCTTCTTTCTGTATTCCCACAGCAAATATTTATTGAAGGTGTACTTTATTTTAAGTAT ..x....x..:.x:..xx..:.xxx.xx.x......:x.x...............:...x......:..:..:.:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 45597155 NA +3069 chr4 + 190214555 106370560 106370559 106370623 64 GGTGGCTTTTTATTTTTGTTTTGTTTTTGGTTTTGCTTTGTATTTTATTTTATTTTGATGAAAA chr4 + 94230402 80653476 80653475 80653539 80653476 80653475 80653539 64 GGTGGTTTTTCATTTTTGTTTTGTTTTGAATTGCTCCTTTTTTTTTAATTTAAATAGAAGAAAA .....:....:................x::..x:x.:..x.x.....x....xx.x..x..... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 25717084 NA +3183 chr4 + 190214555 106376127 106376126 106376197 71 TATGATATTAATTTTATTTTC-----------AGTCTTGGGTTTTATATATATATATATACACACACACACACACACACACA chr4 + 94230402 4409040 4409039 4409121 4409040 4409039 4409121 82 TATGTTGCTATTTTTGTTGTCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ....x.::..x....:..x..-----------..x:.x:..:.x..:.............:.........x.x......... 21M11I50M 55/71 77.5% 82/94230402 0.0% 11/71 15.5% 101967087 88247468 +3300 chr4 + 190214555 106376181 106376180 106376273 93 ACACACACACACACACACACACACACACACACACACATATATGTTTTATATATATACACACATATATGTTTTATATATATATATATACACACA chr4 + 94230402 90424142 90424141 90424234 90424142 90424141 90424234 93 ACATATAGACATGCATACACACTCACGCAATTCTCTATATATTTCCATAATGTATGTACAAATGTATATCTTATATATATATAATTAAACGTA ...:.:.x...::..:......x...:..xx:x:x:......x.::xxx..:...::...x..:...:.:.............xx..x..::. 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 15952039 NA +3107 chr4 + 190214555 106376233 106376232 106376281 49 TATACACACATATATGTTTTATATATATATATATACACACACACTCACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACA-----ATATGTATTATATATATATATATACACACACACACACA ......-----......x..........................x.... 6M5D38M 42/44 95.5% 44/94230402 0.0% 5/44 11.4% 75542040 NA +3448 chr4 + 190214555 106376238 106376237 106376299 62 ACACATATATGTTTTATATATATATATATACACACACACTCACACACACACACACACATATA chr4 + 94230402 66743617 66743616 66743678 66743617 66743616 66743678 62 ACAGATAGGTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACA ...x...x:..:......x...x...:..x:....x......x:..............:.:. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 39632621 NA +3271 chr4 + 190214555 106376247 106376246 106376301 55 TGTTTTATATATATATATATACACACACACTCACACACACACACACACATATATA chr4 + 94230402 46140845 46140844 46140898 46140845 46140844 46140898 54 TATTTTGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACA .:....:.:..-................x......:........::::.....:. 11M1D43M 44/54 81.5% 54/94230402 0.0% 1/54 1.9% 60235402 NA +3009 chr4 + 190214555 106376261 106376260 106376311 51 ATATATACACACACACTCACACACACACACACACATATATATGTATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .......:..........x....:........:::......::x.:x..:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 60235405 NA +3232 chr4 + 190214555 106421255 106421254 106421295 41 TTTCTATTGTTGTTGCTGTTGTTTGTTTGTTTCCTTTTTTT chr4 + 94230402 76208473 76208472 76208513 76208473 76208472 76208513 41 TTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCT ...:.x.........:.......................:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 30212782 NA +3613 chr4 + 190214555 106438055 106438054 106438137 83 CACGGTGGTGCATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:........--.x....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 12M2D69M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 30404858 NA +3120 chr4 + 190214555 106441175 106441174 106441227 53 AAAAAAAAAAAAAATATATATATATATATATATATGTGTGTGTGTGTGTGTGT chr4 + 94230402 60568560 60568559 60568612 60568560 60568559 60568612 53 AAAAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTAT .....:.....x.:.:xx....:........x.x...........:.....:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 45872615 NA +3032 chr4 + 190214555 106441179 106441178 106441236 58 AAAAAAAAAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857605 6857604 6857662 6857605 6857604 6857662 58 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ..:...x.x...::..:...::....x..:.......x...........x..x.x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 99583574 90630981 +3246 chr4 + 190214555 106441181 106441180 106441238 58 AAAAAAAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATA chr4 + 94230402 6857605 6857604 6857662 6857605 6857604 6857662 58 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ..:...x.....::..:...::....x..........x...........x.:x.x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 99583576 90630979 +3329 chr4 + 190214555 106441183 106441182 106441240 58 AAAAAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATA chr4 + 94230402 6857605 6857604 6857662 6857605 6857604 6857662 58 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ..:.........::..:...::....x:.........x...........x.:x.x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 99583578 90630977 +3044 chr4 + 190214555 106441185 106441184 106441244 60 AAAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAAT chr4 + 94230402 6857605 6857604 6857664 6857605 6857604 6857664 60 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAAT ..:.x.......::..:...::...:x:.........x.........:.x.:x.x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 99583580 90630975 +3019 chr4 + 190214555 106441189 106441188 106441243 55 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAA chr4 + 94230402 27325504 27325503 27325558 27325504 27325503 27325558 55 TATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGA ....:.:x.:x.:x..x..............:.........:::..:......:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 79115685 NA +3124 chr4 + 190214555 106441189 106441188 106441250 62 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAATGAAACA chr4 + 94230402 27325502 27325501 27325563 27325502 27325501 27325563 62 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .:....:.:x.:x.:x..x..:...........:..........::..:.....xx:..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 79115687 NA +10215 chr4 + 190214555 106443269 106443268 106443472 204 CCTCCCTCCTTCTCTTCTCTTTCTCTCTTTCTCTTTCTTTCTTTCTTCTTTCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCTC-TCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCT---------TTTCTTTTTCTTTTTTTCTCTTTTTCTCTT chr4 + 94230402 27163691 27163690 27163904 27163691 27163690 27163904 214 CCTCACTATTACTCTACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCctttctttctttctttctttcttttctttctttcttttctttctttctttctttctttctttctttctttctttctttctctctctctctctctctctttctctctttctctctttctctctctctttctctctttctctctt ....x..x:.x....x...:..:.:x:...:.....::.x:...:xx:....:.:....:.........:....:...:...:...:...:.:.::..::..:..-.::..::........::..:.:.:.:.......:.............:.....:.:...:.::..:...---------.....:.:...:...:.......:...... 105M1I69M9I30M 147/204 72.1% 214/94230402 0.0% 10/204 4.9% 79279578 NA +3578 chr4 + 190214555 106443289 106443288 106443459 171 TTCTCTCTTTCTCTTTCTTTCTTT-----------CTTCTTTCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTT--TCTTTTC-----TTTTCTTTTCTTTTTCTTTTTTT chr4 + 94230402 8009577 8009576 8009765 8009577 8009576 8009765 189 TTCTCTTTTTTTTTCTCTTTCTTAACCTATTGTAACCCCTTTTTCTGTTATTCCCTTCATTACCTCCTTCATTGTATTCTTCAGTTAAACCCTTTCTACTATAAGAGTTTCTCATTTCTCATCCTTTATTCCTTCCATGCTCTTATTATTCCAGTCTTTCCCCTAATATACTCACCCATTTCTTTCTTT ......:...:.:.:........x-----------.::....:.::x..x..:.....x..x.:......x..x:x.:....xx.:xxx....:...x.:x:xxxxx:..:..x.....:x::....x.::...:.x.x.....x:.x..::--.....:.-----.x.x..:x:.:x.......:... 24M11I117M2I7M5I23M 107/171 62.6% 189/94230402 0.0% 18/171 10.5% 98433712 91780843 +3103 chr4 + 190214555 106443333 106443332 106443409 77 TTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTC chr4 + 94230402 53757784 53757783 53757860 53757784 53757783 53757860 77 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCC ...::.:.:x:...::.:x.:..:.xxx::...:...:.:.:......:...:...:.....:..::.:...:..:. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% 52685549 NA +3033 chr4 + 190214555 106443378 106443377 106443448 71 TCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCTTTTCTT chr4 + 94230402 69163348 69163347 69163418 69163348 69163347 69163418 71 TTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT .:.:......x............:...::.:...::x:..:.x:.....x..x:..:.::.x...x.::.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 37280030 NA +3171 chr4 + 190214555 106456467 106456466 106456539 73 TGCATTTGTAGTCTCAGCTACCTGGAAGGCTGAGGTGAGAGGATCACTTGGGCCTGGGAGACTGAGTCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x......::.......:..:.........x:xx.x.:.x......::..::.:..x:.x:.x...:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 30423262 NA +3388 chr4 + 190214555 106462996 106462995 106463071 76 AGAAGAAATAGATGAG---GGAAGACAAAAAGAAAGAGAGAAAGAGAGATGAGAGAGAGGAGAAGAGAAAATGAGAACC chr4 + 94230402 43128009 43128008 43128087 43128009 43128008 43128087 79 AAAAGACACAGATGGGCAAAGAAAACAGATATGAATAGATAAAAAGGTATGGAGGAAAGGAGAAGAGGAAATAAGAATC .:....x.:.....:.---:...:...:.x.x:..x...x...:..:x...:::..:..........:....:....:. 16M3I60M 54/76 71.1% 79/94230402 0.0% 3/76 3.9% 63334987 NA +3165 chr4 + 190214555 106480681 106480680 106480768 88 TGTGTTTGTGTGTCTGTGTGTGTGTATATATATATGTTTTATACATATGTT-ATATATAATATACATATATATTGTATATTT-------TTCTCTT chr4 + 94230402 72321894 72321893 72321988 72321894 72321893 72321988 95 TGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACATTTTAATATATATTTCAGA-AAAAAATGTAGATTTGTTCAACTTCTCTT ......x:.....x..............:......:.:.x..x:.:..x..-.......x.x:.x.-.x.x.x....x....-------....... 51M1I14M1D15M7I7M 68/87 78.2% 95/94230402 0.0% 9/87 10.3% 34158787 NA +3273 chr4 + 190214555 106498287 106498286 106498363 77 TCAAGCTTTTCTCCCAGTTGAGTAAAAAAAAAAAAAATGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 64262327 64262326 64262403 64262327 64262326 64262403 77 TTAAACTTTTTTTCTGCTTCACTGACAAAAAAGTGTATGTGCTTAGTTTTTTTGGTTTTTTTTTTTTTTTTTTCTAA .:..:.....:.:.::x..x.x.:.x......:x:x...:x...xx.......xx..................:.:. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 42235960 NA +3152 chr4 + 190214555 106500493 106500492 106500574 82 AGAATATATATATATATATATATATTTTTTTTTTTTTTTT-----------------TTTTTGAGACAGA---GTCTTGCTCTCAACCCAGGCTGGAATGCA chr4 + 94230402 24792623 24792622 24792722 24792623 24792622 24792722 100 AAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC--CTGGAATGCA .::...................x:........x.......-----------------......::::x..---:...::x......:..x--.......... 40M17I13M3I17M2D10M 64/80 80.0% 100/94230402 0.0% 22/80 27.5% 81707870 NA +3091 chr4 + 190214555 106500495 106500494 106500541 47 AATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 24792623 24792622 24792669 24792623 24792622 24792669 47 AAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAA ..x...................xx........x.........::.:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 81707872 NA +3361 chr4 + 190214555 106507626 106507625 106507706 81 GGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGA-GGAGGAGAAGGAAGAGGAAGAAGAAG--AAGAAGAGACAAGAGGAAATTG chr4 + 94230402 65503041 65503040 65503124 65503041 65503040 65503124 84 GGAGGAGAAAAAGGAAGAAAAAGATAAAGTGGATGGGGGAAGAACAAGCATGGGAAAAAGGCAAGAAGGGGCAAGGGGAGATTG .......:.::.......::....x:.:.x...-..:...::.:x...x:x::...:...--......:.:....:...:.... 33M1I26M2I22M 57/81 70.4% 84/94230402 0.0% 3/81 3.7% 41004585 NA +3472 chr4 + 190214555 106516958 106516957 106517024 67 TTGAGCAGTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTGTTTTTGTTTTT-TTGAGACAG----AGCCTCAC chr4 + 94230402 90203134 90203133 90203205 90203134 90203133 90203205 72 TTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATTAAGACATTATCAGCTTCAC .....x:.....................x....x....x.....x...x.-..:.....x----...:.... 50M1I9M4I8M 57/67 85.1% 72/94230402 0.0% 5/67 7.5% 16313824 NA +3056 chr4 + 190214555 106516963 106516962 106517012 50 CAGTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTGTTTTTGTTTTTTTGAG chr4 + 94230402 77610501 77610500 77610550 77610501 77610500 77610550 50 CAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCATTTGAG ...x.......x...........x.........xx....x..:x...... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 28906462 NA +3091 chr4 + 190214555 106526228 106526227 106526281 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x.:........::.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 30493017 NA +3074 chr4 + 190214555 106548745 106548744 106548811 67 ACTCCCCTCCCTCTCTTCCTTCCCTTCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTTC chr4 + 94230402 25163653 25163652 25163718 25163653 25163652 25163718 66 ACCCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCT-CCTTCCCTCTCCCC ..:....x...:.x..:....::.....:x:..x:.....::..::...:..-.........:.::. 52M1D14M 46/66 69.7% 66/94230402 0.0% 1/66 1.5% 81385092 NA +3577 chr4 + 190214555 106548792 106548791 106548932 141 TCCCTCCCTTCCCTCCCTTCCCTTCCCCTCCTTCCCTCC-------CTTCCCCTCCTTCCCTCCCTTCCCTCCCTTCCCTCCCCTTCCCCTCCCTTCCCCTCCCCTCCACCCCTCCCCTCCCCCTCCCCCTCCCCTCCCCTCCCCTTC chr4 + 94230402 93283207 93283206 93283341 93283207 93283206 93283341 135 TCCATCCATCGTCCCTTTTTCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTC-------------TCCATCCATCCTCTCCCCCTCCACTTGCATTGCCCTTTCTCCC ...x...x.:x:.:.::..:.....:..::....:.:..-------.x..::....:.xxx..x:...::::..x...x..x:..:...:..-------------....:..x...:..........x.:.x.x:.x....::.:::. 39M7I46M13D43M 81/128 63.3% 135/94230402 0.0% 20/128 15.6% 13265585 NA +3127 chr4 + 190214555 106548899 106548898 106548966 68 CCCCTCCCCCTCCCCCTCCCCTCCCCTCCCCTTCCCTTTCCTTCCCTTCCCTTTCTTCTCTTCCTTCC chr4 + 94230402 85827542 85827541 85827609 85827542 85827541 85827609 68 CCTCTTCCCTTCCACCTCCTCTCACCCCTCCACCCCTAGGGCCTCCTGCCCTTTCTCCTCTTCATTTC ..:..:...:...x.....:...x..:.:..x:....xxxx:::...x........:......x..:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 20721357 NA +3096 chr4 + 190214555 106613123 106613122 106613192 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 30579926 NA +3306 chr4 + 190214555 106622351 106622350 106622419 69 ACATATATGTACACACACACACACATGCATA------TATATGTATGTGTGTGTGTGCATGTGTGTGTGTATGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ...:.:..:.x....::..x...........------...:.:...x.........::...::..:::...x... 31M6I38M 51/69 73.9% 75/94230402 0.0% 6/69 8.7% 84022153 NA +3196 chr4 + 190214555 106622383 106622382 106622451 69 ATATGTATGTGTGTGTGTGCATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATAAA chr4 + 94230402 27325491 27325490 27325559 27325491 27325490 27325559 69 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAA ..::.....xx...:.:::.x..x::x.:x:.............:.........:::..:......:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 79296892 NA +3065 chr4 + 190214555 106622385 106622384 106622449 65 ATGTATGTGTGTGTGTGCATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 27325491 27325490 27325555 27325491 27325490 27325555 65 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATA ...::.:..xx...:.:..:x..x::x.:x..:...........:..........::..:..... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 79296894 NA +3195 chr4 + 190214555 106668816 106668815 106668889 74 TGGCAATATTCCTTGTATTAAGGTCTATTTTATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 + 94230402 71243305 71243304 71243378 71243305 71243304 71243378 74 TGGGAATATACTTTATTTCAAGTATTTTTTAAACTATTCTGCTTTAATTTGTTTTTTTTTTTTTTTTTTGATAC ...x.....x.:..:.x.:...xx:.x...x.x..:..:.x:...xx...x....................x.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 35425511 NA +3416 chr4 + 190214555 106778201 106778200 106778278 78 GTGGTACAAGCCTGTAATCCCAGCTACTGAAGAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGTGGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....:..x.--....:.:.........x:.:........x.xx.x...x..:..........:..x.xx:..:..:. 10M2D66M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 30745000 NA +3315 chr4 + 190214555 106782744 106782743 106782834 91 TGCACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTCGGAGGCAGAGGCTGCGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x....:.:.:.......::::........x.xx.x...x..........:x.:..x:xx:.....::.------..x..x...... 73M6D12M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% 30749539 NA +3179 chr4 + 190214555 106788471 106788470 106788535 65 TCTATTTGGTTCTTTTAATTGTTTTTTTCTCTTTTCTTGTTTTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 2383780 2383779 2383844 2383780 2383779 2383844 65 TCCATTTAGTTTACTTGACTGTCTTGTTCCTTCTTCTTTTGTTTTTTTTTTTTTTCCTTTCCCTT ..:....:...:x:..:.:...:..x...::.:.....x.x...:..........::...:::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 104404691 85809864 +3042 chr4 + 190214555 106810194 106810193 106810271 78 TCCCCTTCCTCCTCCTCCTCCTCCTCACTCTCTTCCTCCTCTTCTTCTCCTTCTTTCTTCTTTCTTCTCTCCTTCTCC chr4 + 94230402 53757784 53757783 53757861 53757784 53757783 53757861 78 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCC .:.:.....x:..::.:.x....:.x.x..:.::..:..:.::.:..:::..:....:.:...:.::.:.::...:.. 78M 46/78 59.0% 78/94230402 0.0% 0/78 0.0% 53052410 NA +3083 chr4 + 190214555 106810327 106810326 106810389 63 TTTCTCTTTCTTCTTCTTCTTCCTGCCCCTCCTCTTCCTCCTCCCCCTCTCCCTTTCCCTCCT chr4 + 94230402 86523032 86523031 86523094 86523032 86523031 86523094 63 TTCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCCACTCT ..:.::.....:.:...:.x...:x:......::..:.........xx.:...:....x::.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 20287295 NA +3336 chr4 + 190214555 106810373 106810372 106810449 77 CTCTCCCTTTCCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCCCTCCTTCTTCTTCCTTCTTCTTCCTTCTCTTTTTT chr4 + 94230402 53757786 53757785 53757857 53757786 53757785 53757857 72 CTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTT-----TTCTTTTTTTT ....:..x.::::.:.x......xxx:.:..:..:..:..........:..:......:..-----....:...... 61M5D11M 52/72 72.2% 72/94230402 0.0% 5/72 6.9% 53052587 NA +3223 chr4 + 190214555 106810391 106810390 106810535 145 CTCTTCTTCCTCCTCCTCCTCCCCCTCCTTCTTCTTCCTTCTTCTTCCTTCTCTTTTTTAGAGACAGTGTCCAGTTTCAAATGACAGAATCAGCTGATTTAATAATGGTAATTATGTGTCTTTTTAGTTTTTTTGTTTTGTTTTG chr4 + 94230402 57202249 57202248 57202378 57202249 57202248 57202378 130 CTGTTCTGCCCTCCCCCCCCCCCCCCCC---------------CTTTCTTTTTTTCATCACAGAAATTATTAAACAGAAAGTGTTGAGGACACCAATTTTAATATTGGAGAAAATGTCTTTTTTTTTTTTTTTTGTTTTTTATTG ..x....x..::.:..:..:.....:..---------------...:...:.:..:x.:.x...x.x.:.:x.::xxx..:..x:::::x..x.x:x.......x...x:.xx....x.:.....xx............x.x... 28M15D102M 82/130 63.1% 130/94230402 0.0% 15/130 11.5% 49608142 NA +3138 chr4 + 190214555 106810840 106810839 106810893 54 CCCACCCCAGACATTTCCTTTTTCTTTCTTTT--TTTTTTTTTTCTTTTTTTGAAA chr4 + 94230402 41864303 41864302 41864358 41864303 41864302 41864358 56 CCCTCCCCAAACATTTGCTTTTTTTTTCCCCCCGTTTTTTTTTTTTTTTTTTaaaa ...x.....:......x......:....::::--..........:.......:... 32M2I22M 44/54 81.5% 56/94230402 0.0% 2/54 3.7% 64946537 NA +3340 chr4 + 190214555 106814273 106814272 106814342 70 CATGGTGGCACTTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACAAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::.x:.--......:...........::........x.x::x...x::...........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 30781076 NA +3020 chr4 + 190214555 106814410 106814409 106814457 48 CTCAAAAACAAACAAACAAAAAAACAAACAAACAAAAACAACACCCAC chr4 + 94230402 39133306 39133305 39133353 39133306 39133305 39133353 48 CTCAAATAGAATTAAATAAATAAACAAACAAACAAAAACAACATACAC ......x.x..x:...:...x......................:x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 67681104 NA +3857 chr4 + 190214555 106834298 106834297 106834380 83 CATGGTGGCATGCACCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCCAGGAGGCAGAGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x..:.:.:...........::........x.xx.x...x.:......:....:..x:xx:........ 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 30801101 NA +3096 chr4 + 190214555 106858922 106858921 106859007 86 AGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAA chr4 + 94230402 10269798 10269797 10269883 10269798 10269797 10269883 86 AAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAA .:..:x..x::..........::.x......:x.:...:xx.....:.:x.x......x..::::....:x.xx::.....:.... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 96589124 93625431 +3458 chr4 + 190214555 106858960 106858959 106859127 168 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGGAGGAAGAG----GAGGAGGAAGGGGAAAGGTAAGGGGATGGGGGAGGGGAGGGGGAGGGTGAAGGGGGAGGAGGAGGGGGGAAGAGTTGGAGGAGGAGCAGAAAGGGAAGAAAGAGAAGAAA chr4 + 94230402 59596353 59596352 59596515 59596353 59596352 59596515 163 AAGGACCAGAGGGAAAAGAGAAAGAACAGGCACAGGGGAAAGTGATGTGCTTAAATAGTATTGAGGGAAAGAGGGAAACTCA----GATGAAGAATAGGAATGGGGGG---CGGGGGGAGAAGGAGGGAGGGTGGTCTGTTTAAAGAGCAGAA--GCAGAGAAGAGGAGAAA ...:.xx...:.:.:....::.....x.:.x.x.:.:::...x:.x:x.xxx:..x..----....:::.::......xx:.----....::.:.x:...:x...:..---x:.......:.......:..:x.:x:..xxx:.:........--.x.:::.....:..... 58M4I20M4D22M3D42M2D17M 98/159 61.6% 163/94230402 0.0% 13/159 8.2% 47262607 NA +3075 chr4 + 190214555 106862340 106862339 106862436 97 CAAAAAGAAGCTCTGGAGCAAATATTATACATTTTCTTGAAAATCATTTAATTTTGGAACTGTGAAAATACATTTTATTTAGTAAACAGAGAAAATA chr4 + 94230402 29911652 29911651 29911748 29911652 29911651 29911748 97 CAATAAAAAGCTTTGGAGCAAGTATTGTTTCCTCTTTTAAAGGTTTTTAAATTGTGTTACTGTGGTTTTATGCATTATTTACTGACTCAAAAGAGTA ...x..:.....:........:....:.x:x:.:.:..:..::.:x..x....x..xx......:xxx..:::x.......x.:.x:x:.:.:.:.. 97M 60/97 61.9% 97/94230402 0.0% 0/97 0.0% 76950688 NA +3349 chr4 + 190214555 106864836 106864835 106864920 85 AGGTAGTTACGGTAT--GGAATTGCTC-------AAATCTTTCAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857563 6857562 6857656 6857563 6857562 6857656 94 AAGTATTTATGGTATAAGTATCTGTTCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .:...x...:.....--.x.x:..:..-------..x..:.:x.:.x.......::..:...::....x:.........x...........x.. 15M2I10M7I60M 63/85 74.1% 94/94230402 0.0% 9/85 10.6% 100007273 90207282 +3414 chr4 + 190214555 106864853 106864852 106864918 66 AATTGCTCAAATCTTTCAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857597 6857596 6857656 6857597 6857596 6857656 60 AATTCCTCAAG------AAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ....x.....:------.........::..:...::....x..........x...........x.. 11M6D49M 50/60 83.3% 60/94230402 0.0% 6/60 10.0% 100007256 90207299 +3332 chr4 + 190214555 106876933 106876932 106877004 72 GAAGTTTAATTTTCCAATTTTTTGCTATTATACAAAACAGAGATCATCCATCATAGCTAAATTTTTCTGCAT chr4 + 94230402 52595498 52595497 52595559 52595498 52595497 52595559 62 GAAGATTCATTCTCCAATTTGTTGCCATTATACAAAACAGATTTCCTTCATC----------TTTTCTGTAT ....x..x...:........x....:...............xx..x.:....----------.......:.. 52M10D10M 52/62 83.9% 62/94230402 0.0% 10/62 16.1% 54281435 NA +3288 chr4 + 190214555 106887812 106887811 106887879 68 ATAACTACACAGACACACACATATACACACACACACATGCACACACACACACACACACACACACACAG chr4 + 94230402 54963196 54963195 54963263 54963196 54963195 54963263 68 ATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGG ...x::.:.....::.....x....:...........xx...:::.:.x..:.......:x:.:..:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 51924616 NA +3068 chr4 + 190214555 106903484 106903483 106903535 52 AGTATAAAAAAAAAAAACAAAAGAAAAAAGCAGAAAGGACAAAAAAGTCTCT chr4 + 94230402 73975540 73975539 73975591 73975540 73975539 73975591 52 AGGATTAAAAAAAAAAACAGAAGGAAAAAGAAGAAAGAACAAACTATTTTCT ..x..x.............:...:......x......:.....xx.x.:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 32927944 NA +3878 chr4 + 190214555 106933946 106933945 106934042 97 TAAGTTTCCTGTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACACACTATATATATATACAT chr4 + 94230402 85834524 85834523 85834615 85834524 85834523 85834615 92 TGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACAC-----ATACACACAT .::....::.:.xx..x.....x.................:.xx:....x::..::..:.:..x......:.x..::.....-----...:.:.... 82M5D10M 65/92 70.7% 92/94230402 0.0% 5/92 5.4% 21099422 NA +3614 chr4 + 190214555 106933956 106933955 106934037 82 GTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACACACTATATATATA chr4 + 94230402 39131755 39131754 39131835 39131755 39131754 39131835 81 GCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA-ACGCTCACTATGTGCACA .:..:.....x...x.x.......:x.....:......x..x...:..x...x:...:...:.-..:.x......:.::.:. 63M1D18M 59/81 72.8% 81/94230402 0.0% 1/81 1.2% 67802201 NA +3027 chr4 + 190214555 106933959 106933958 106934024 66 AATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACA chr4 + 94230402 86633918 86633917 86633983 86633918 86633917 86633983 66 AAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCA ..x.x:..x.:...:...:..:x..:.:.:.x......:...::...:.........x.:..::.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 20300041 NA +3386 chr4 + 190214555 106933959 106933958 106934047 89 AATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATA--TATACATATATACACACACTATATATATATACATCTGCA chr4 + 94230402 79265518 79265517 79265608 79265518 79265517 79265608 91 AGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCA .:............::........xx.....:.::...:.:..:..:.:.--:.x......x.::::x...x.:.:x.x....:.xx.... 50M2I39M 60/89 67.4% 91/94230402 0.0% 2/89 2.2% 27668441 NA +3653 chr4 + 190214555 106933961 106933960 106934026 66 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACACA chr4 + 94230402 85834541 85834540 85834606 85834541 85834540 85834606 66 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA .....x.................:.xx....:x::...::......x...:.::.x...:...... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 21099420 NA +3041 chr4 + 190214555 106933964 106933963 106934022 59 GTGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx...:....:..::.:..:.::.:..::.x.:.:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 27668445 NA +3330 chr4 + 190214555 106933974 106933973 106934068 95 GTGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACACACTATATATATATACATCTGCATACACACAGATACACACACAC chr4 + 94230402 79265519 79265518 79265609 79265519 79265518 79265609 91 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAA---ACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC .............:......:.:xx.....:..:...:..:.:.::....:..x---.:....x.:::..::..-....x:xx...:.x.::... 54M3D17M1D20M 62/91 68.1% 91/94230402 0.0% 4/91 4.4% 27668455 NA +3269 chr4 + 190214555 106934008 106934007 106934091 84 ATATACATATATACACACACTATATATATATACATCTGCATACACACAGATACA------CACACACACACACACACACACACACATATG chr4 + 94230402 80850789 80850788 80850878 80850789 80850788 80850878 90 ACATCCATGCATGCACTCGCAACATCAGTATACATATGCATGCACACAAGCAGAGAACACCACACACACACAGACACAGCAGCACAAATG .:..x...::..:...x.:.x.:..xx:.......x.....:......:::.x.------............x.....xxx:....x... 54M6I30M 60/84 71.4% 90/94230402 0.0% 6/84 7.1% 26083219 NA +3142 chr4 + 190214555 106958815 106958814 106958886 72 CAACAAGAGTGAAACTCAATCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAACATAAAAGAAAAAG chr4 + 94230402 29522394 29522393 29522464 29522394 29522393 29522464 71 CAACCAAAG-AAAAATCACTTTTACAAAAAGAAAAAAAAAAGAAAAATGTAACTAAAACATGGAAGAAATAG ....x.:..-:...x...x.:.:.x.....:..............:.x:x..xx.......::......x.. 9M1D62M 53/71 74.6% 71/94230402 0.0% 1/71 1.4% 77436421 NA +3172 chr4 + 190214555 106958838 106958837 106958896 59 AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAACATAAAAGAAAAAGAAAATCTTAA chr4 + 94230402 44043473 44043472 44043531 44043473 44043472 44043531 59 AAAAGAAAAAAAGAAAAAATGAAGAAGAAAGTCAACATATCAGGAAAAAAAAATCTAAA ....:.......:.....:x:.::.......xx......xx..:....:.......x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 62915365 NA +3040 chr4 + 190214555 106960102 106960101 106960156 55 AGAGAAAAAATGTTATATATATATATATATACACACACACATATATATACATATA chr4 + 94230402 78281283 78281282 78281337 78281283 78281282 78281337 55 AAGGAAATGAGGTTATATGGGTGTATTAATACACACACACACATATATATATATA .::....x:.x.......:x:.:...xx.............:.......:..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 28678819 NA +3423 chr4 + 190214555 106962455 106962454 106962574 120 AGAACAGTCTCTTCAAGAAATGGAGCC-AGAAAAACTATGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGCAGAAGAATGAAACTAG chr4 + 94230402 27325456 27325455 27325578 27325456 27325455 27325578 123 AGAATGTTCTCTTTCTCATTTAGAGCTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCAGTGCGAAACCAG ....::x......:xxx.xx.:....:-...::..x.::..:..--...:.::::x..x::x.:x:.:...........:.........::..:::.:.:....x:...x..x::.....:.. 27M1I16M2I77M 74/120 61.7% 123/94230402 0.0% 3/120 2.5% 79636999 NA +3887 chr4 + 190214555 106982880 106982879 106983039 160 AAAAAATCAATGGAGAAAGCATAGTCGCCTTCTATACATTGGGGAGGGAAAGAAAGAAGGAAAGAAAGAGAAG--------AAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAG------AGAGAAAGGAAGGAAGGAAGAAGAAAGATGA chr4 + 94230402 49044652 49044651 49044813 49044652 49044651 49044813 162 AAAAGATTAAAGAGAAAAGAATA----------AGAGATTAGGGGTGGTTAGAAAGAC--AAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ....:..:..x.:::....x...----------.x.x...:...:x..xx.......x--..:x.:x......--------:.:..:::.....:xx.........::..:::x....:.x:............:.:------...:..xx..::xx.......:.:..:.... 23M10D25M2D13M8I56M6I31M 100/148 67.6% 162/94230402 0.0% 26/148 17.6% 57938228 NA +3072 chr4 + 190214555 106982913 106982912 106983004 92 ATACATTGGGGAGGGAAAGA--------AAGAAGGAAAGAAAGAGAAGAAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAA chr4 + 94230402 24501302 24501301 24501401 24501302 24501301 24501401 100 ATTCATTAGGAAGAGCTTGAGTATAATTAGGAAGGAGAGAGGGGGGAGAAAAAAAACAAACCAGAATTTAGGAAAAAGAAAATTAAAAAAAAAACAAGAA ..x....:..:..:.xxx..--------.:......:...::.:.:.......:..x..:xx....xxx.:..:.......:xx.:.:....:.x..... 20M8I72M 62/92 67.4% 100/94230402 0.0% 8/92 8.7% 82481611 NA +3590 chr4 + 190214555 106982913 106982912 106983092 180 ATACATTGGGGAGGGAAAGAAAGAAGGAAAGAAAGAGAAGAAAAAGAAGAAGAAAGAAA--------------GAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAAAAGAAAGAAACAAAGAAAA chr4 + 94230402 61325911 61325910 61326096 61325911 61325910 61326096 186 ATAAAGTAGTGAGTATAAAACAAAATGATGCAGGGAGAAGCCGAGGAGTGGAAAAGAGCTTTCATTGGCAATTAAGAGAGAAAGAAGTCAAGGGGACAGAGGAGACAGAG-------GGGAGAAAGTAATATGTTAAGT-AAATAAACATTGAGATAGATAAGAAAGTGAGTGATAAGAAAGAAATAGATAAAA ...x.x.:.x...x:x..:.x.:..x..x:x.::......xx:.:..:x:::.....:x--------------:.:..........:xx...:.:.x...::...x.:..-------..:..:...x..x.x.xx.::.-...x...x.xx..:.x...x.......x:..x:.x..........:.:.x.... 59M14I37M7D22M1D54M 109/172 63.4% 186/94230402 0.0% 22/172 12.8% 45657002 NA +4176 chr4 + 190214555 106982915 106982914 106983091 177 ACATTGGGGAGGGAAAGAAAGAA-----------------GGAAAGAAAGAGAAGAAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAAAAGAAAGAAACAAAGAAA chr4 + 94230402 65771162 65771161 65771337 65771162 65771161 65771337 176 ACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAG------------AAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGA------GAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA ....::..x....xx..x.....-----------------.....:........x....:::..------------..:..x.x:...:xx....:......:.:xx.:..x..:..x:..x.xx....:....::...------:..x..:x..:...x.x......x..x..x....xx..x..x...:... 23M17I24M12D63M6D49M 110/159 69.2% 176/94230402 0.0% 35/159 22.0% 41211753 NA +4293 chr4 + 190214555 106982920 106982919 106983085 166 GGGGAGGGAAAGAAAGAAGGAAAGAAAGAGAAGAAAAA----GAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAA-AGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAAAAGAAAGAAACA chr4 + 94230402 34805291 34805290 34805461 34805291 34805290 34805461 171 GGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAACA ...xx....:x.::::...:x:..:...:...:.....----...:..x:::.x.x...x..x....x.x....:::...:x.x.:.:.x.:..x.:.:-......x..::x.x::.:..:x....:x:xx:..::..........x:.:.:.....::x...:::..... 38M4I57M1I71M 100/166 60.2% 171/94230402 0.0% 5/166 3.0% 72177629 NA +3631 chr4 + 190214555 106982932 106982931 106983083 152 AAAGAAGGAAAGAAAGAGAAGAAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAG----AAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAG-----AAAAAAGAAAGAAA chr4 + 94230402 23740045 23740044 23740205 23740045 23740044 23740205 161 AAAAAAGGAATTACAGGAAATATAGGGAACAAGGGAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAAAGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAA ...:......xx.x..::..x.x.::...x...::.:x....:..x:.:.....:----:..x:.x..x.:x.::.:...xx.....:x:..:.x.:x.:.xx:.x..:.x..:.x.:::::....:.:....:...:....-----.....x.x...... 55M4I83M5I14M 93/152 61.2% 161/94230402 0.0% 9/152 5.9% 83242887 NA +3348 chr4 + 190214555 106982953 106982952 106983049 97 AAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA .:..........xx.x.:...:.....:.........x....:xxx.:.:xx:..:x.::.x.x.:...:x.::....:...:.x....:::..::. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 55834574 NA +3098 chr4 + 190214555 106982955 106982954 106983072 118 AAAGAAGAAGAAAGAAAGAAAGAGAAAG---AAAGAAA-------GAGA-----AAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAA chr4 + 94230402 25222872 25222871 25223004 25222872 25222871 25223004 133 AGGGAAGATGAATTAACTATGGAAAAAGTCAAAAAAAACCAACCTGAGAGTCATAATGAGAACAGGAAAAGAGAAAAGAAGAAACACACCAAAAAGACTTAGGAAAGGATGAAAAAAAGAAGATTGAAAAGAA .::.....x...xx..xx.x:..:....---...:...-------....-----..x..:..x.::..:.......:....:..x:x.xx.:.....:xx.:.....:.x....:.:.:....xx....::.. 28M3I7M7I4M5I79M 80/118 67.8% 133/94230402 0.0% 15/118 12.7% 81760083 NA +3177 chr4 + 190214555 106982983 106982982 106983100 118 AAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAG------------------AAAAGAAAGAAAGAAAAAAGAAAGAAAC--AAAGAAAATTTCTAAA chr4 + 94230402 69368740 69368739 69368877 69368740 69368739 69368877 138 AGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATGGTTTGTACCAGGGCCAGTGGCATAACGAAAGCAAAAGAGAACAGATTAAAAGAAAATAACTGAA .:.:............:.:....::.:.....x..x:.:::.:.::......x:xx.x..::.x.......:x.------------------::x.x..x.....x....:::..x.:.:--.........xx..:.. 74M18I28M2I16M 77/118 65.3% 138/94230402 0.0% 20/118 16.9% 37614243 NA +3383 chr4 + 190214555 106983276 106983275 106983394 119 GAGAAAGAGAGAAGAAAGAAAAGAAAGGAAGAAGAAAGAAAGAAGAAAGA--AAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAAGAAAGAAAAGAAAAA chr4 + 94230402 75995055 75995054 75995173 75995055 75995054 75995173 119 GACAATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAAAGAACT--AGAAAAACAGCAAGGGAGAAGCAATTATGAAAACAACAACAAAAAAAA ..x..x:...:.xxx.....:.....:x..::.:.x....:.:.......--x.....:x.x.:.....xx--.....:.x..x...::....:x..xx.x.....x..x:.x..:..... 50M2I19M2D48M 79/117 67.5% 119/94230402 0.0% 4/117 3.4% 30988221 NA +3336 chr4 + 190214555 106983295 106983294 106983400 106 AAAGAAAGGAAGAAGAAAGAAAGAAGAAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAAGAAA--GAA------AAGAAAAAGAAAAA chr4 + 94230402 84536568 84536567 84536681 84536568 84536567 84536681 114 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAA ..:.:..:.:::......:...x..x...:.x......x:.:...:....::.:.::..:..:.....:xx.x.x..x..:.xx..x.:--...------....:.....x... 89M2I3M6I14M 71/106 67.0% 114/94230402 0.0% 8/106 7.5% 22446727 NA +3575 chr4 + 190214555 106983315 106983314 106983389 75 AAGAAGAAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAAGAAAGAAAAG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG .:.....:..:.......x..:...x...x:..x...::.::.x::.x.x:..x.x................... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 35382289 NA +3951 chr4 + 190214555 106985793 106985792 106985953 161 ATGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAG---AAAAAGAAAAA---AAATAAGACAGGAAGGAGG---GAGAGAAGAAAGGAGGGAGGAAAGAAGGAGGGACAAAAAGGGAGGGAAGGCA---AGAAGAAAGAAGAAAGGAAGGGAG chr4 + 94230402 1317400 1317399 1317565 1317400 1317399 1317565 166 ATAGCAGAATAAGA-----TCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATT--TAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAG ..::....:::...-----..xx.::..:..::.....:...:..........x:---....x..:..:---....:..x.....:.....---......:x.x.:.x....:....xxx...xx--:.:.....:....x..x..---::.x.:..:.:..:..xx.:.... 14M5D36M3I11M3I19M3I31M2D19M3I24M 106/154 68.8% 166/94230402 0.0% 19/154 12.3% 105668393 84546162 +3992 chr4 + 190214555 106985800 106985799 106985991 192 AGCGAGACTCCGTCTCAAAAAAAAAAAAA-----AGAAAAAAGAAAAGAAAAGAAAAAGAAAAAAAATAAGACAGGAAGGAGGGAGAGAAGAAAGGAGGGAGGAAAGAAGGAGGGACAAAAAGGGAGGGAAGGCAAGAAGAAAGAAGAAAGGAAGGGAGGAAGGCAAGAAATCTCACCAGGAAACCTTTCAGATCTC chr4 + 94230402 8397416 8397415 8397600 8397416 8397415 8397600 185 AGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGAGCT------------TTTCAAATCTC ..x:.x.....xx....::.:..:x.x.x-----...x.:.:xx.:.:::...x:.:...:..::.xx...xx::......x.:.x:::.x..::.x::.......:..x:.:.x......::x.x...:x:.x......xx..:.:.....:::.x..:.:..:..:.:.x..------------.....:..... 29M5I140M12D11M 107/180 59.4% 185/94230402 0.0% 17/180 9.4% 98588384 91626171 +3485 chr4 + 190214555 107003600 107003599 107003657 58 GTCATAATTCCACAGATGGTAGTTGTGCCCCATTGGCTCCTCAGCCAAGCATATACAC chr4 + 94230402 39685067 39685066 39685124 39685067 39685066 39685124 58 GTCATAATCCCACAGATGGTAGCACCGTCTCTTTTGCTCCTCAGCCAAGCTCATAAAC ........:.............:xx:.:.:.x..x...............x:...x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 67318533 NA +3813 chr4 + 190214555 107003695 107003694 107003822 128 AAGATTACCACGGCAGCAACATATCATCAGTAGTATAAAACTAACCTGTCTCAGGACCGGGTCCAGCGTCATCACATCACATAGGACCTTATTAAAATTTAAAATATCAGACCTCAGACCTACAAAAT chr4 + 94230402 26190649 26190648 26190763 26190649 26190648 26190763 115 AGGATTACTAGCGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGAT--GATCTAAC----CCAGCTCACAT---TCCCTATTAGTGGGTGAA----CAATCcacagaatcacagaat .:......:.xx...:.....:...........x:..................x..:--.:..:.:.----:..xx......---x..:.....:x:xx.:..----..:x..x....x::...:... 57M2D8M4D11M3D18M4D21M 84/115 73.0% 115/94230402 0.0% 13/115 11.3% 80813046 NA +3279 chr4 + 190214555 107020740 107020739 107020798 59 TTTTAAAAATAATTTTTGACAGGCTTTGTGTGTGTGTGTGTCTCTGTGCGCACATTTTA chr4 + 94230402 23224876 23224875 23224934 23224876 23224875 23224934 59 TTTAAAAAGTTACTTTTCACCAACTGTGTGTGTGTGTGTGTCTTTGTGCCTACATATTA ...x....:.x.:....x..x::..x.................:.....x:....x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 83795864 NA +3384 chr4 + 190214555 107048182 107048181 107048255 74 GCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCCCAAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...x......:.........:.::........x.xx.x...x.x.........xx...x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 31014978 NA +3040 chr4 + 190214555 107062996 107062995 107063057 62 ATAGGTTTTTCAAATATATATATATACACATACACACACACACACACACATACACACAGACA chr4 + 94230402 66743621 66743620 66743682 66743621 66743620 66743682 62 ATAGGTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCA ......x:..:.x.x...x...:..x:...:x...x..x:..........:........x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 40319375 NA +3118 chr4 + 190214555 107081496 107081495 107081568 73 TGCACACACTTAAACACATCTATATATACATATATACACAGACACATGCACATATATGCACATACACATATGT chr4 + 94230402 40730003 40730002 40730075 40730003 40730002 40730075 73 TGTACACATTTGAAAGTACATATGCAGATATATATGCACTCACACATGCACACGTATGTGCCTCTGCGTGTGT ..:.....:..:..x::.:x...::.x.:......:...xx...........::....::.x.x::.:.:... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 66351493 NA +3022 chr4 + 190214555 107126435 107126434 107126480 46 GACTTTCTGTTTTTTTTTGTTTGTTTGTTTGTTTTTTTGAGACAGA chr4 + 94230402 56811235 56811234 56811280 56811235 56811234 56811280 46 GACTTTTTCTTTTGTTTTGTTTGTTTGTTTGTTTTCCCAAGACTGA ......:.x....x.....................::::....x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 50315200 NA +3239 chr4 + 190214555 107126443 107126442 107126485 43 GTTTTTTTTTGTTTGTTTGTTTGTTTTTTTGAGACAGAGTCTT chr4 + 94230402 42400938 42400937 42400980 42400938 42400937 42400980 43 GTTTTTTTTTGTTTGTTTGTTTGTTTTTTTAAGAATGAGACTT ..............................:...xx...x... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 64725505 NA +3181 chr4 + 190214555 107141942 107141941 107142054 113 AGTTCATACATATATATATATGTGTGTGTGTGTGTGTGTGTGTATG----------TGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 68837022 68837021 68837144 68837022 68837021 68837144 123 AGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT .......:::......:...::.:::.::x.::::::::::.:.x.----------.:x..x:xx...x.x::.....:.............:.:.:.x...:...:...:.:..::.:.:.. 46M10I67M 66/113 58.4% 123/94230402 0.0% 10/113 8.8% 38304920 NA +3085 chr4 + 190214555 107141952 107141951 107142032 81 TATATATATATGTGTGTGTGTGTGTGTGTGTGT--ATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:...x.................:.--....:x.:..:::.....:x:.:::...x.:..:::::...:.:.:.. 33M2I48M 53/81 65.4% 83/94230402 0.0% 2/81 2.5% 21307419 NA +3375 chr4 + 190214555 107141954 107141953 107142056 103 TATATATATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 + 94230402 21109194 21109193 21109296 21109194 21109193 21109296 103 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ....:..:.....x.x....x.:..:.x.:.....::x:.::.:..:x:....::x.:.::..:...::x:..::x.x.:.:.....:.:...:x....::.. 103M 61/103 59.2% 103/94230402 0.0% 0/103 0.0% 86032760 NA +3325 chr4 + 190214555 107141956 107141955 107142069 114 TATATATGTGTGTGTGTGTGTGTGTGTGTATGT--GTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATAT----------ATATATATATATATATATATATCCTACTAGTAT chr4 + 94230402 85834533 85834532 85834658 85834533 85834532 85834658 126 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCACTTGAAT ...x:..x.....x...............:.:.--:....x.::..::.:...:x:.:::...x.:..:.:.:...:.:.:..----------..x.x:x.x.:...:..:.x..:.:...x.x.. 33M2I48M10I33M 74/114 64.9% 126/94230402 0.0% 12/114 10.5% 21307423 NA +3497 chr4 + 190214555 107141956 107141955 107142058 103 TATATATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 21109194 21109193 21109296 21109194 21109193 21109296 103 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ....:........x.x....x.:..:.x...:...::x::::...::x:....::x.:.::..:....:x:..::x.x.:.:.....:.:...:x....::.. 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 86032762 NA +3055 chr4 + 190214555 107141958 107141957 107142040 83 TATATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x.............:...:.xx....:x:::.:::.:...:x:.:::...x...::.:.:...:.:.:.. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% 21307425 NA +3187 chr4 + 190214555 107141970 107141969 107142034 65 TGTGTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx...:..:::x..x.:x.:x..:...........:..........::..:...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 79816478 NA +3368 chr4 + 190214555 107141973 107141972 107142045 73 GTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATA chr4 + 94230402 39131745 39131744 39131817 39131745 39131744 39131817 73 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:..x...::.:.x......x...x.x.......:x.....::.....x..x..::..x...x:.......:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 68010228 NA +3044 chr4 + 190214555 107141974 107141973 107142031 58 TGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATA chr4 + 94230402 3414931 3414930 3414988 3414931 3414930 3414988 58 TGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACA ..x.....:x........:......x...:......::::xx..:....:..:...:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 103727043 86487512 +3578 chr4 + 190214555 107141980 107141979 107142057 78 TGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834610 85834533 85834532 85834610 78 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .:.x:..x.....x.....:...........:.xx:...:x.:...:....:..x...:..:.x...::.:.:...:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 21307447 NA +3276 chr4 + 190214555 107141984 107141983 107142058 75 TATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834607 85834533 85834532 85834607 75 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ...x::.x.:...x.:...............:.xx:....x::...:....:..x...:..:.x...::.:.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 21307451 NA +3187 chr4 + 190214555 107141988 107141987 107142057 70 TGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834602 85834533 85834532 85834602 70 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .:.x:..x...:.x.................:.xx..:..x::...:....:..x...:..:.x...::. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 21307455 NA +3514 chr4 + 190214555 107141992 107141991 107142077 86 TATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATCCTACTAGTATATATATGG chr4 + 94230402 85834533 85834532 85834617 85834533 85834532 85834617 85 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGC-ACACATACACACATGG ...x::.x.....x...................xx..:..x::...:....:..x...:..:.x...x.-..xx:..:.:.:.... 69M1D16M 61/85 71.8% 85/94230402 0.0% 1/85 1.2% 21307459 NA +3121 chr4 + 190214555 107141994 107141993 107142056 63 TGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .:.x:..x.....x...............:...xx..:..x::...:....:..x...:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 21307461 NA +3343 chr4 + 190214555 107141995 107141994 107142062 68 GTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATA------TATATATATATATATATATATCCTA chr4 + 94230402 70094141 70094140 70094214 70094141 70094140 70094214 74 GTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACATTCTA .....x:.:.......x...x...x.....:.....:......------.x:...x........::.:..:... 43M6I25M 53/68 77.9% 74/94230402 0.0% 6/68 8.8% 37047854 NA +3075 chr4 + 190214555 107141998 107141997 107142056 59 TATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .:...x.................:.xx..:..x::...:....:..x...:..:.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 21307457 NA +3005 chr4 + 190214555 107142000 107141999 107142058 59 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 79265520 79265519 79265578 79265520 79265519 79265578 59 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT ............::........xx.:......:...:.::.:.::.:.:::.x.:.... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 27876480 NA +3067 chr4 + 190214555 107144793 107144792 107144851 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 31111587 NA +3108 chr4 + 190214555 107173271 107173270 107173354 84 TGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGTATGTGTGTGTATATATATATGTATATTCATATGTACATATATATATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGT--------GTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.............--------...::.xx....:x.::..:....:..x:..:..x:x....:...:...:.:.:... 19M8D57M 54/76 71.1% 76/94230402 0.0% 8/76 10.5% 21338730 NA +4058 chr4 + 190214555 107174605 107174604 107174705 101 TATGTGTGGCCCAAGACAATTATTCTTCTTCCAATGTGGCCCAGGGACGCCAAAAGATTAGACACCCCTGCTCTACATGATCCTACAATTTATTTTTGCCA chr4 + 94230402 43915637 43915636 43915729 43915637 43915636 43915729 93 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATGTGCT--------TTACAATTAATTCTTGCCA ...:.....:......:....x:.:...x::x......x.....:x.x.x......x..:..::...x..:x..--------:.......x...:...... 74M8D19M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% 63258968 NA +17712 chr4 + 190214555 107203343 107203342 107203924 582 AGACATTTACAACAGCAGGCATTTTCTC---TTCCTCTTCTTCACGGGAGGTGGGCAGAGGACTGCTTGGATCTCTTTGTCAAACACTGTT--GAGGCCTCGCTGTGTGAGTGCCGAGCACTTCAGGTATTTTACAGCACCAATCTCCTTAGTGATGGCTAGACCCTGCAGATAGGTGATGGGAGTCAGCTTCTTCTCCTTCAGTTTCTCAGTCGTGTCTGTATCATCCCTAAGTTCAAGTTTAGTTCCCACTAGGATGATGGGAGTGTTGGGACAGTGGTGCTCCACCTCAGGATACCACTTTGCACGGACTTTTTCAAATGATGCAGGACTCACAAGGGAAAAGCAAATTAAGAACACATCTGTTTGCGGATAGGGTAGGGGGCATAATCTGTCATAATCTTCTTGAGCAACTGTATCCCATAAGCCCAAATTCACCGGTTTTCCATCTACCACAACATTGGCAGAATAATTGTCAAAGACAGTAGGGATATATTCTCCAGGAAATGCATTGGTTGTGTAACTGATCAGTAGG-AAGTTTCACCTACAGCTCCGTCTCCCACCACCACACCCTTGATGGCCTGCAT chr4 + 94230402 2233582 2233581 2234163 2233582 2233581 2234163 582 AGGTAACTACAATAAGACACATTTCCTTGTGTTCTTCTTTGTCACAGGA------TAAAGAACTGCACGCACAGCTTCAGCAAACACCTCCCGAACACCCTCCTGATTCAATGCTGAGCACTCCAAATATTTGACTGCTCCGATTTGTTTAGCCAGTGAAGTCCCCTGTTGTGGGGTAGTGGGAGCCAAGCTTTGCTCTTTTAACTTTTTAACTGTTTCCAGGTCGTTTCTCAAGTCTCTCTTCGTGCCCACTAAAAGAATGGGAACATTAGGACAGTGGTGAGAAACTTCAGGATGCCACTTGTGCCTCACATTTGCATAGGAAGACGGGCTGCCAATGGAGAAGCAGATGACAAATACATTGGTTTGAGGATATGAGAGTGTGCGCAGACGGTCATATTCCTCCTGGCCTGCAGTGTCCCAGAGATTCAGGCTAACCGTCCGGCCATCAACAGTCATTTGGGCACTATAGTTGTCAAACACAGTAGGGATGTACTCTTCTGGGAAGGCATTGGTGGTATAGCTGATGAGAAGACAAGTTTTTCCCACAGCACCATCTCCAACAACTACGCACTTTATAGTCTGCAT ..::.x:.....:.:x.x:.....:..:---...:....:x....:...------:.:..:.....x:.x.:xx...::x.......:x::--:.x:..::x...xx.x.:...:.......:..::.....x..x..x..:..:.x:....:x.xx.xx:xx.....:x.xx:...::......:..:x:.:.x...:..:.::..:.:.:::..x..::x:..:.::..x.:x..xxx:..x..x.......::.x:......:::..:...........xxxx..:.......:......xxxx.xx..x...x..x.x..x.xx..:..xx...x...:.....:..x.x:..:....:x.....x.....x.:x..x.x..::.:x.x......x..:..:..:x.x:.x..:.....x.::::..:::.x....x::xx.....x..x::x.:x.x....xx...:........x...........:..:...:.x..:..x........x..:..:.....x..x..:-......:x..:.....x..:.....x..x..:..:.x...x..:.:...... 28M3I18M6D36M2I442M1I52M 366/576 63.5% 582/94230402 0.0% 12/576 2.1% 104969761 85244794 +3268 chr4 + 190214555 107228477 107228476 107228559 83 CGTAGTGGCGAGCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAAACCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.--...x....:.::..........::........x.xx.x...x::......x....:..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 31195280 NA +3031 chr4 + 190214555 107236521 107236520 107236566 46 TTCATCCAGCAGCACCAATTCTGCTTACCAAAAATGTCCCATGAGA chr4 + 94230402 77532410 77532409 77532455 77532410 77532409 77532455 46 TTCATCCTGCGGCACCATTTCTGCTTACCAAAAGTGGCCCACTGGA .......x..:......x...............:..x....:x:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 29704111 NA +3134 chr4 + 190214555 107256400 107256399 107256467 68 GTTTTTTTTTTTTCTGTTTTGTTTTGTTTGCTTGTTTTATTTTGTTTTGTTTTGTTTTGTTTTTGTCT chr4 + 94230402 44367552 44367551 44367619 44367552 44367551 44367619 68 GTTTTTTGTTTAGCTGTGTGGGTGTGTGGGCTTGTTTGCTTTTGTTGTGTTCTGCTTTATTTGTGTTT .......x...xx....x.x.x.x...xx........xx.......x....:..:...:...x...:. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 62888848 NA +3493 chr4 + 190214555 107262130 107262129 107262203 74 TTTACACATATATACAAATGTGTGATATATATACACATATACATATATACATATGTGCATGTATACACAAACAT chr4 + 94230402 56867289 56867288 56867356 56867289 56867288 56867356 68 TTTATACATATT-----GTGTGTGA-ATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTAT ....:......x-----:.......-...:.............:xx...:..x............:....::.. 12M5D8M1D48M 56/68 82.4% 68/94230402 0.0% 6/68 8.8% 50394841 NA +3032 chr4 + 190214555 107287169 107287168 107287217 49 ATGTGTATATATACACACGTATATATGCATATATATACACACACACACA chr4 + 94230402 23247722 23247721 23247770 23247722 23247721 23247770 49 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACA ......:...::......:.x...:x:.....:..:.....:....... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 84039447 NA +3501 chr4 + 190214555 107299042 107299041 107299107 66 GCGGCGCATGTCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAGTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..:...:..--...:.............::........x.xx.x...x..x..........:.. 11M2D53M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 31265841 NA +3179 chr4 + 190214555 107300741 107300740 107300814 74 GTGTGCCAATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.xx:..:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 31267537 NA +3292 chr4 + 190214555 107307399 107307398 107307530 132 TATACATATATACATACATATGTGTGTATATATACACATATATATACATACATATGTGTGTATATATACACATATATACATACATATGTGTGTATATATACACATATATACACATACA---TATGTGTGTATATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA .......:.:.::x.x::.:x.:..:.x.....::..x:.:......x::::..:x.:.:::...:...x...::x.x::.::........:.:x....:..:::.:.::x:xx....---.x....x..:..:. 118M3I14M 75/132 56.8% 135/94230402 0.0% 3/132 2.3% 86198205 NA +3796 chr4 + 190214555 107307407 107307406 107307480 74 TATACATACATATGTGTGTATATATACACATATATATACATACATATGTGTGTATATATACACATATATACATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........:-.:......x...:...........:.:xx...:..x....::.:........x:...:....:. 9M1D64M 56/73 76.7% 73/94230402 0.0% 1/73 1.4% 50440116 NA +3826 chr4 + 190214555 107307441 107307440 107307512 72 TATACATACATATGTGTGTATATATACACATATATAC--ATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........:-.:......x...:...........:..--...:..x....::.:........x:...:...... 9M1D27M2I35M 58/71 81.7% 73/94230402 0.0% 3/71 4.2% 50440150 NA +3465 chr4 + 190214555 107307463 107307462 107307583 121 TATACACATATATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......::.:.:.x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.::..:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86198269 NA +4058 chr4 + 190214555 107307473 107307472 107307546 74 TATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........:-.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M1D64M 58/73 79.5% 73/94230402 0.0% 1/73 1.4% 50440182 NA +3998 chr4 + 190214555 107307505 107307504 107307580 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M3D64M 58/73 79.5% 73/94230402 0.0% 3/73 4.1% 50440214 NA +3998 chr4 + 190214555 107307539 107307538 107307614 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M3D64M 58/73 79.5% 73/94230402 0.0% 3/73 4.1% 50440248 NA +3998 chr4 + 190214555 107307573 107307572 107307648 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M3D64M 58/73 79.5% 73/94230402 0.0% 3/73 4.1% 50440282 NA +3998 chr4 + 190214555 107307607 107307606 107307682 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M3D64M 58/73 79.5% 73/94230402 0.0% 3/73 4.1% 50440316 NA +3131 chr4 + 190214555 107307633 107307632 107307740 108 TACACATATATACACATACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.:.::..x:...:..:....:x:..:.x:x.:.:..:.::.::.::x.....::..:.:. 108M 60/108 55.6% 108/94230402 0.0% 0/108 0.0% 86198439 NA +3111 chr4 + 190214555 107307649 107307648 107307717 69 TACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATAC chr4 + 94230402 54963193 54963192 54963261 54963193 54963192 54963261 69 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .::....x::.::.x..::....x..........:.....xx:.:...:.:x:...:......x..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 52344456 NA +3132 chr4 + 190214555 107307690 107307689 107307768 79 ATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACA----------TACACACATG chr4 + 94230402 54963196 54963195 54963284 54963196 54963195 54963284 89 ATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATG ....x::.::.x..::....x..........:.....xx:.:...:.:x:...:......x.....:x.----------....:..... 69M10I10M 56/79 70.9% 89/94230402 0.0% 10/79 12.7% 52344494 NA +3089 chr4 + 190214555 107307700 107307699 107307770 71 ATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATGTG chr4 + 94230402 22600202 22600201 22600272 22600202 22600201 22600272 71 ACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:....x.....::.x......:..:...x.x:.:.......x.:::::.:....::...:...::.x... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 84707498 NA +3296 chr4 + 190214555 107307713 107307712 107307794 82 TATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-------TGTGTGTGAATACATACAC--ATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..-------.:......x...:......--........xx.:.:.:x....::.:........x:...:...... 9M7D19M2D45M 57/73 78.1% 73/94230402 0.0% 9/73 12.3% 50440422 NA +3154 chr4 + 190214555 107307840 107307839 107307917 78 ATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACA----------TACATACAT chr4 + 94230402 54963196 54963195 54963283 54963196 54963195 54963283 88 ATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT ....x::.::.x..::....x..........:.....xx:.:...:.:x:...:......x.....:x.----------......... 69M10I9M 56/78 71.8% 88/94230402 0.0% 10/78 12.8% 52344644 NA +3108 chr4 + 190214555 107307844 107307843 107307928 85 GTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACATACATATGTGTGTATA chr4 + 94230402 21109217 21109216 21109301 21109217 21109216 21109301 85 GTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:.x.....:...x..:......x.:.::..x:...:..:....:x:..:.x:x.:.:..:.::.::..:x.....::..:.:. 85M 52/85 61.2% 85/94230402 0.0% 0/85 0.0% 86198627 NA +3080 chr4 + 190214555 107307888 107307887 107307958 71 ATATATACACATATATACACATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTG chr4 + 94230402 22600202 22600201 22600272 22600202 22600201 22600272 71 ACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:....x.....::.x......:......x.x:.:.......x.:::::.:....::...:..::.:x... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 84707686 NA +3967 chr4 + 190214555 107307908 107307907 107307980 73 ATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .......:-.:......x...:...........:..xx...:..x....::.:........x:...:...... 8M1D64M 57/72 79.2% 72/94230402 0.0% 1/72 1.4% 50440616 NA +3998 chr4 + 190214555 107307939 107307938 107308014 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....::.:........x:...:...... 9M3D64M 58/73 79.5% 73/94230402 0.0% 3/73 4.1% 50440648 NA +3450 chr4 + 190214555 107307965 107307964 107308096 132 TACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATGTGTGTATATATACACATATATACGCATACATGTGTGTATATATACACATATATACGCATACA---TATGTGTGTATATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.:.::.:x.:.:::...:...x...::x.x:.::..:......:.:x....:..:::.:.::x.xx....---.x....x..:..:. 118M3I14M 76/132 57.6% 135/94230402 0.0% 3/132 2.3% 86198771 NA +3623 chr4 + 190214555 107307973 107307972 107308048 76 TATACACATACATATGTGTGTATATATACACATATATACACATACATGTGTGTATATATACACATATATACGCATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT---TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..---.:......x...:...........:..xx...:..x....:..:....:...x:...:::..:. 9M3D64M 55/73 75.3% 73/94230402 0.0% 3/73 4.1% 50440682 NA +3663 chr4 + 190214555 107307997 107307996 107308115 119 TATACACATATATACACATACATGTGTGTATATATACACATATATACGCATACATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC----------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......::.:.:.x:x::.:x::..:.x.....:...x..:......x.----------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M10D60M 70/109 64.2% 109/94230402 0.0% 10/109 9.2% 86198803 NA +3550 chr4 + 190214555 107308007 107308006 107308080 74 TATACACATACATGTGTGTATATATACACATATATACGCATACATGTGTGTATATATACACATATATACGCATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ......:..-::......x...:...........:..xx...:..x....:..:....:...x:...:::..:. 9M1D64M 54/73 74.0% 73/94230402 0.0% 1/73 1.4% 50440716 NA +3592 chr4 + 190214555 107308029 107308028 107308149 121 TATACACATATATACGCATACATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......::.:.:.x:x::.:x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 70/109 64.2% 109/94230402 0.0% 12/109 11.0% 86198835 NA +3536 chr4 + 190214555 107308038 107308037 107308183 146 ATATACGCATACATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGC------------------GTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x.:.x:............x.x.:.:x:.------------------..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 30M18D26M12D60M 80/116 69.0% 116/94230402 0.0% 30/116 25.9% 86198851 NA +3681 chr4 + 190214555 107308039 107308038 107308112 74 TATACGCATACATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .....::..-::......x...:...........:..xx...:..x....::.:........x:...:...:.. 9M1D64M 55/73 75.3% 73/94230402 0.0% 1/73 1.4% 50440748 NA +3127 chr4 + 190214555 107308040 107308039 107308131 92 ATACGCATACATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATAT chr4 + 94230402 66286775 66286774 66286866 66286775 66286774 66286866 92 ACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTTAT .:...::.:x....:...:x.:..x::x......:x...:.:.:.....::...x.::....x.:.::.:.::....:xx....:.::x... 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% 41021265 NA +3745 chr4 + 190214555 107308078 107308077 107308146 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440786 NA +3481 chr4 + 190214555 107308097 107308096 107308217 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86198903 NA +3745 chr4 + 190214555 107308112 107308111 107308180 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440820 NA +3481 chr4 + 190214555 107308131 107308130 107308251 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86198937 NA +3745 chr4 + 190214555 107308146 107308145 107308214 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440854 NA +3481 chr4 + 190214555 107308165 107308164 107308285 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86198971 NA +3745 chr4 + 190214555 107308180 107308179 107308248 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440888 NA +3481 chr4 + 190214555 107308199 107308198 107308319 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86199005 NA +3745 chr4 + 190214555 107308214 107308213 107308282 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440922 NA +3481 chr4 + 190214555 107308233 107308232 107308353 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86199039 NA +3745 chr4 + 190214555 107308248 107308247 107308316 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50440956 NA +3481 chr4 + 190214555 107308267 107308266 107308387 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.:...:.. 49M12D60M 69/109 63.3% 109/94230402 0.0% 12/109 11.0% 86199073 NA +3350 chr4 + 190214555 107308301 107308300 107308421 121 TACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACACATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC------------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:::x::..:.x.....:...x..:......x.------------..:..:x..:..:...:...x...:.x.x.....:...:.:..::x....::.::..:.. 49M12D60M 68/109 62.4% 109/94230402 0.0% 12/109 11.0% 86199107 NA +3745 chr4 + 190214555 107308316 107308315 107308384 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACGCA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...:.. 8M3I61M 55/69 79.7% 72/94230402 0.0% 3/69 4.3% 50441024 NA +3867 chr4 + 190214555 107308350 107308349 107308418 69 ATACATAT---GTGTGTATATATACACATATATACGCATACATATGTGTGTATATATACACATATATACACA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........---.....x...:...........:..xx...:..x....::.:........x:...:...... 8M3I61M 56/69 81.2% 72/94230402 0.0% 3/69 4.3% 50441058 NA +3023 chr4 + 190214555 107308412 107308411 107308482 71 ATACACATACACATATATATACACATATATACATATATATACACACATATATACATATATGTATATACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.......:x..:..::.x......::.....x.x....::.:.:x.:.:.:::......:..::..:.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 84708214 NA +3186 chr4 + 190214555 107308419 107308418 107308527 109 TACACATATATATACACATATATACATATATATACACACATATATACATATATGTATATACATATATATGTATTTTTATATATACGTATATATACACATATATATACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.:.x:x::.:x::::..x.....::..x..:......x::.:.::x.....:...:..:x:..x:..x.:.:..::.:.:...:x.:..::..::.... 109M 61/109 56.0% 109/94230402 0.0% 0/109 0.0% 86199225 NA +3009 chr4 + 190214555 107308420 107308419 107308483 64 ACACATATATATACACATATATACATATATATACACACATATATACATATATGTATATACATAT chr4 + 94230402 74526066 74526065 74526129 74526066 74526065 74526129 64 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ....xx.x..x:.....:.:.:....:x.:.......x........:.....:.:...x:.x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 32782354 NA +3456 chr4 + 190214555 107308614 107308613 107308763 150 GTATGTGTATACATATGCGTATATACACA-CGTATGTGTATACATATGCGTATATACACACGTATGT--GTGTGTATATATATGTGTATGTGTATATATGTGTATGTGTATGTGCATATATGTGTATGTATGTGTATCTATATGTGTATATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATG------CAGATGTGTGCACAT ..:x.x..:.:x.....x.:.:.xxx:..-:.:.x....::x...:x..::::..x.::::..::.:--....x.::.:.:.::.x..:......::..x..:......:..:...x.::.....:..:...------:.x......::.:.. 29M1I37M2I63M6D15M 86/144 59.7% 147/94230402 0.0% 9/144 6.2% 102094439 88120116 +3273 chr4 + 190214555 107308656 107308655 107308766 111 ATATGCGTATATACACACGTATGTGTGTGTATATATATGTGTATGTGTATATATGTGTATGTGTATGTGCATATATGTGTATGTATGTGTATCTATATGTGTATATATGTG chr4 + 94230402 21109187 21109186 21109297 21109187 21109186 21109297 111 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..x...x....:.:::::..x.x....x.::...x...:....:x:::.....:x:..:.::x...::.:..:..:x::.::x.x.......x.:.:.:..x....:::.. 111M 64/111 57.7% 111/94230402 0.0% 0/111 0.0% 86199469 NA +3304 chr4 + 190214555 107308728 107308727 107308820 93 ATATGTGTATGTATGTGTATCTATATGTGTATATATGTGTGTGTTTATATATA----------TATATATATATATATATGTGTGTGTGTGTGTGTGTGTTAA chr4 + 94230402 21109187 21109186 21109289 21109187 21109186 21109289 103 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAA ..x..:x...::......:...x.:..x.::...x.:.:...::.:.:.....----------....::...:..:x:...:x.x.....:.:.....:.x.. 53M10I40M 62/93 66.7% 103/94230402 0.0% 10/93 10.8% 86199541 NA +3145 chr4 + 190214555 107308774 107308773 107308818 45 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTT chr4 + 94230402 6857610 6857609 6857654 6857610 6857609 6857654 45 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTT .......::..:...::....x..........x............ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 100451164 89763391 +3042 chr4 + 190214555 107308783 107308782 107308839 57 TATATATATATATATGTGTGTGTGTGTGTGTGTGTTAAGGTTTTAGACTTTAAGATG chr4 + 94230402 60568578 60568577 60568634 60568578 60568577 60568634 57 TATACATATATATCTCTGTGTGTGTGTATGTGTATAAAGTCCTTTGTTTCTAAGACG ....:........x.x...........:.....:.x...x::..x.x:.:.....:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 46740205 NA +3225 chr4 + 190214555 107357334 107357333 107357411 78 AAAATAAAATAAAATAAAAGAGAAAAGCATCTTTGTTAAGATAAAACAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAA chr4 + 94230402 17914924 17914923 17915001 17914924 17914923 17915001 78 AAAGTGCAACAAACTGAAAGAGAGTAAATTCCATCTTGATATAAAGCAAAAGAAAATAAAGAAGAAAAAAAAAAGCAA ...:.:x..:...x.:.......:x.:xx..:x.x..:.x.....:.....:....x......::....:...::x.. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 89442410 NA +3364 chr4 + 190214555 107391186 107391185 107391310 125 AATAGGTGCTCAATAGGTATTTGTGGAAGACGGGAGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGAAGGAAGAAATGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAG chr4 + 94230402 890634 890633 890755 890634 890633 890755 122 AAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGA---GGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAG ..x:.:....x::x...x:x...x..x.:x.x.x....:.:...x:.:---.:::.........x:..........:....x...:::...::..x:x:.:::...:xx..:::x..x...:... 48M3D74M 73/122 59.8% 122/94230402 0.0% 3/122 2.5% 106500552 83714003 +3041 chr4 + 190214555 107407481 107407480 107407598 118 AAGAAAAGGAAAGAAAAGAAAGGAAAAGAAAGAAAAGAAAGGAAGAAAAAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 75527841 75527840 75527961 75527841 75527840 75527961 121 AGGAAGAGATGAGAAAGAAAAGGGGAACAAAGCAAAGTACAGACTGAAAAAAAAATGAAGGAAGGTCAAATAGATTTAAAGATAACAAGCAAAAGCTTGGGTAGACATGAAGACAGTCAGA .:...:..:x:.....::.....::..x....x....x.x:..xx:......:..x..::...:.xx.:.x...xxx.....x.:x...x..:.:---:.:x...x.x:....x..xx... 95M3I23M 74/118 62.7% 121/94230402 0.0% 3/118 2.5% 31879640 NA +3197 chr4 + 190214555 107407495 107407494 107407603 109 AAAGAAAGGAAAAGAAAGAAAAGAAAGGAAGAAAAAAAGAAAGAGAGAAAGAAAGAAAGAAAGAA-AGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 25190328 25190327 25190436 25190328 25190327 25190436 109 AAAGCAAAGATGAGAGAGAAAAGAAA--AAAATCAAATGTGGTAGAGAAGAAATGTAAGAGAGAATAGACAGAGATGAGAGGTATAAAACAGTAGAAAAAGGAGAGAAGAA ....x..:..x:...:..........--..:.xx...x.x::x......::..x.x....:....-...x...:.-..:..:x.x...:x.:x.:.:....:.:::..... 26M2D37M1I9M1I35M 73/107 68.2% 109/94230402 0.0% 4/107 3.7% 82217167 NA +3741 chr4 + 190214555 107424241 107424240 107424320 80 AGTGGCTTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--..::.x......:...........::........x:xx.x.:.x::.....:.....:..:..x:.....:.. 5M2D73M 57/78 73.1% 78/94230402 0.0% 2/78 2.6% 31391041 NA +3229 chr4 + 190214555 107428060 107428059 107428105 46 ATATACATATATATATATATATATACACATGTATGTATGTATATAC chr4 + 94230402 33416746 33416745 33416791 33416746 33416745 33416791 46 ATATACATATATATATATCTGTATACACATGTCTGCACGTATGTGC ..................x.:...........x..:.:....:.:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 74011314 NA +3357 chr4 + 190214555 107455490 107455489 107455551 62 CTCTCTCTCTCTCTCTCTCTCTTTCACACACACACACACACACACACACACAATGAAAAAAA chr4 + 94230402 75248049 75248048 75248110 75248049 75248048 75248110 62 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaa ..::..................:x................x.x.x.x.x.x.:x..:.:... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 32207441 NA +3483 chr4 + 190214555 107455492 107455491 107455551 60 CTCTCTCTCTCTCTCTCTCTTTCACACACACACACACACACACACACACAATGAAAAAAA chr4 + 94230402 75248049 75248048 75248108 75248049 75248048 75248108 60 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagaga ..::................:...................x.x.x.x.x.:x..:.:.:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 32207443 NA +3403 chr4 + 190214555 107455494 107455493 107455552 59 CTCTCTCTCTCTCTCTCTTTCACACACACACACACACACACACACACAATGAAAAAAAG chr4 + 94230402 75248049 75248048 75248107 75248049 75248048 75248107 59 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagag ..::..............:..x..................x.x.x.x.:x..:.:.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 32207445 NA +3185 chr4 + 190214555 107455496 107455495 107455531 36 CTCTCTCTCTCTCTCTTTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ................:........:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 94854192 NA +3192 chr4 + 190214555 107455506 107455505 107455602 97 CTCTCTTTCACACACACACACACACACACACACACAATGAAAAAAAGTCATTTTCCTATAGAATGCTCTCCAGTTACTGAT------AAAGAATACTCCCCTT chr4 + 94230402 32335935 32335934 32336037 32335935 32335934 32336037 103 CTCTCTTTCACACACCCACACGCACACAAAGACAAAGAAAAAAAAAATAATGCATCAATATGAAATCTTACAAGCGCTGATTGCCAGTAAGGACACTCTTTTT ...............x.....:......x.x...x.:x:.......:.x..x:x:.x...x:.x::::.x..:x::.....------x...:.:....:::.. 81M6I16M 64/97 66.0% 103/94230402 0.0% 6/97 6.2% 75119571 NA +3080 chr4 + 190214555 107461903 107461902 107461943 41 TGTATATATATATATACACACACACACAAAAGCACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ....:...........:.:.........:.::......... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 103052821 87161734 +3096 chr4 + 190214555 107477709 107477708 107477778 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 31444512 NA +3182 chr4 + 190214555 107493219 107493218 107493282 64 ATACATATGTATGTATGTGTGTGTATATATCTATGTATGTATATAAAGATATATGAAAGGACAT chr4 + 94230402 46063299 46063298 46063362 46063299 46063298 46063362 64 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATAT ......:....::.:...:..x.:.:..:..:........x....x.x.......:x.:x.:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 61429920 NA +3363 chr4 + 190214555 107507731 107507730 107507809 79 TTTAATGCAGTAATTAGGAAAAAAGAAAAATACATAAAGAAGGAGAAAGAAATATAATAGACCAAATCTTCAAAACAGA chr4 + 94230402 73589063 73589062 73589141 73589063 73589062 73589141 79 TTTGATGCAGTAACTAGAAAAAAAGAGATTTCAGCAGTGAAAGAAAAAGAATTAAAATAGGCAGAATCCCAGAAAAAAA ...:.........:...:........:.xx.xx::.:x...:..:......x..x.....:.x:....::x:...x.:. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 33918668 NA +3098 chr4 + 190214555 107530363 107530362 107530455 93 GGATAAGGAAAATGTGGCTATATATATATACACATACACACACACACACACACACACACCATGGAATACTACCTAGCCACAAAAAAAATAAAA chr4 + 94230402 74671058 74671057 74671134 74671058 74671057 74671134 77 GAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAA---------------TAGCTA-AAAAAAATTAAAA .:...x:x....xx.:...:..........:.:.................x.x.x.x.---------------....:.-.......x..... 58M15D6M1D13M 61/77 79.2% 77/94230402 0.0% 16/77 20.8% 32859305 NA +3430 chr4 + 190214555 107530366 107530365 107530484 119 TAAGGAAAATGTGGCTATATATATATACACATACACACACACACACACACACACACCATGGAATACTACCTAGCCACAAAAAAAATAAAATAATGT----ATTTTGCAGCAACTTGGATAGAA chr4 + 94230402 4409067 4409066 4409181 4409067 4409066 4409181 115 TAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACAC--------ATTTTCCCCAGCAGAAGAAACAAACAGAGAATTTTCTGCTCTTGCAACACAGCAGATATAA ...:..:.x..x....:..:.......:.:...:.........x.x........--------..x:.x..:...x:x.:...x..xx.:.x...x.----x.:.....:..xxx::....x.. 54M8D34M4I23M 77/111 69.4% 115/94230402 0.0% 12/111 10.8% 103121299 87093256 +3010 chr4 + 190214555 107530377 107530376 107530419 43 TGGCTATATATATATACACATACACACACACACACACACACAC chr4 + 94230402 43671851 43671850 43671893 43671851 43671850 43671893 43 TGTCTATACATGTATACACATGCACACACACAAACACATGCAC ..x.....:..:.........:..........x.....::... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 63858526 NA +3462 chr4 + 190214555 107556396 107556395 107556480 85 TATTTATATATATATTTTATATATATTTTTATATATTTATATATATATTTTATATATATTTATATATATATTTTTATATATTTTA chr4 + 94230402 53583745 53583744 53583829 53583745 53583744 53583829 85 TATCTGTATATATATTTTACATATGCTTGCATATATAAAGATGCATGTCTGAGACGTATTCCTACAGATGTTTGCATGTATATCA ...:.:.............:....::..x:......xx.x..::..:.:.x.x.::....:x..:.x..:...x:..:...x.:. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 53972651 NA +3637 chr4 + 190214555 107586018 107586017 107586126 109 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGAAAGCTGAGGCAAGAGAATCATTTGAACCTGGAAGGCAGAAGTTGCAGTGGATTTATTGATATAAAACATATGT chr4 + 94230402 76033197 76033196 76033298 76033197 76033196 76033298 102 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACA-----TGATGCCAAGCAGATGT .:::......--...x......:...........:..:......x.xx.x...x..:.......::....x:xx::.:..:..x:x.-----....::x..:..x.... 10M2D75M5D17M 71/102 69.6% 102/94230402 0.0% 7/102 6.9% 31552821 NA +3226 chr4 + 190214555 107598662 107598661 107598720 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAACCTGAGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x.:.x..........::::.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 31565456 NA +3328 chr4 + 190214555 107604911 107604910 107604983 73 TGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAAAACCACTTGAACCTGGGAGGTGGAGGTTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........x.::........x.xx.x:..x..........::.:..x.xx:..:.::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 31571706 NA +3122 chr4 + 190214555 107630777 107630776 107630851 75 GACCTTATACAAGCTACTTAGCCTTTGTATGCCTCTAGATACTCACCTACAAAATGGAGGTAACAGCACCTACTT chr4 + 94230402 83501141 83501140 83501215 83501141 83501140 83501215 75 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCT ...::.:x:...::......:...x.:.:......x:xx.x.:.....::.........x.:.:..:.x:...:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 24129636 NA +3057 chr4 + 190214555 107646305 107646304 107646357 53 ATATATACACACACACACACACATACACACACATACACACATACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.::.::........:x:..:x...:.::.................... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 84398583 NA +3782 chr4 + 190214555 107704821 107704820 107704911 91 TGCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x......:.........:::.........x.xx.x...x::...........:..x:xx:..:..:..------..x..x...... 73M6D12M 63/85 74.1% 85/94230402 0.0% 6/85 7.1% 31671616 NA +3321 chr4 + 190214555 107713618 107713617 107713681 64 CATGTTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACC chr4 + 94230402 76033197 76033196 76033258 76033197 76033196 76033258 62 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC ..::x........:--......:.........:.::........x.xx.x...x.......... 14M2D48M 49/62 79.0% 62/94230402 0.0% 2/62 3.2% 31680421 NA +3183 chr4 + 190214555 107726969 107726968 107727046 78 TGGGAAAGGGAGAGGGTATATATATATACATATATATATATACATATATATATATACAATATATGTATATACATATAT chr4 + 94230402 83316553 83316552 83316630 83316553 83316552 83316630 78 TGGGAGTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAATCTGGACAGATATGTGTAT .....:x..:x........:.:.:.:..:..:.x...:..:.....:...:...x:x...x.:x::.x...::.:... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 24410416 NA +3159 chr4 + 190214555 107726984 107726983 107727068 85 GTATATATATATACATATATATATATACATATATATATATACAATATATGTATATACATATATATATACACATATATATATACAC chr4 + 94230402 6244974 6244973 6245058 6244974 6244973 6245058 85 GTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACAC ...............x.........:..:.x:x..:x.::xx..x.xX:x.:.:..x:x:.:.:....x.:.......:.:.... 85M 56/84 66.7% 85/94230402 0.0% 0/85 0.0% 101482010 88732545 +3067 chr4 + 190214555 107726987 107726986 107727038 52 TATATATATACATATATATATATACATATATATATATACAATATATGTATAT chr4 + 94230402 43939132 43939131 43939183 43939132 43939131 43939183 52 TGTATATATACATATGTATATATGCACATATGGAAATACAAAGTGTGTTTAT .:.............:.......:..:....:x.x......x:.:...x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 63787855 NA +3218 chr4 + 190214555 107729765 107729764 107729834 70 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 31696568 NA +3585 chr4 + 190214555 107742708 107742707 107742790 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTAAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:.........:.::........x.xx.x...x::...:.....:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 31709511 NA +3728 chr4 + 190214555 107759304 107759303 107759382 79 GTGGTTGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--....x....:.:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 5M2D72M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 31726103 NA +3070 chr4 + 190214555 107803004 107803003 107803057 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:xx.:...:...x...::..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 81224738 NA +3295 chr4 + 190214555 107803006 107803005 107803059 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:x..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 81224740 NA +3269 chr4 + 190214555 107803008 107803007 107803064 57 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGCAA chr4 + 94230402 26578266 26578265 26578322 26578266 26578265 26578322 57 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAA .:...................:.:.:.:.:.xx..:...:...x...::.....x.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 81224742 NA +3010 chr4 + 190214555 107817599 107817598 107817679 81 CGTGGTGTTGCTCCTGTAATCCCAGCTACTCGGGAGGCTGAAACACAAGAATCGTTTGTACCTGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::...x...x.x....:.:.........:.::.......:x.x::x...x.::...x...::.:..x:xx...:..:.. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 31784402 NA +3053 chr4 + 190214555 107839791 107839790 107839870 80 ATTTATTTTTAAAAGCTTTTTAAAACTTTACTAGAGGGAGACACATTTTTGAATATTG--TTCCATCTGATTTCTATTTCTT chr4 + 94230402 48401904 48401903 48401985 48401904 48401903 48401985 82 ATTTATTTTTAAATGCTTTTTAAAAATTTATTACTGGAAAATACAGCTTGGTATGTTTGCTTTGTTCATGTTTCTTTTTTTT .............x...........x....:..xx..:.:.:...x:..x.x..:..x--..:xx..xx:.....x...:.. 58M2I22M 58/80 72.5% 82/94230402 0.0% 2/80 2.5% 59437887 NA +3837 chr4 + 190214555 107844195 107844194 107844266 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 31810989 NA +3138 chr4 + 190214555 107866435 107866434 107866508 74 GTGCACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.:.......::::........x.xx.x...x.:........::::..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 31833231 NA +3524 chr4 + 190214555 107872539 107872538 107872612 74 GTGCACCTGTAGTACCAGCTACTCAGGAGGCTAAGGCAGGAGGATTGCTTGAGCCCAGGAGTTAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......x.........::::.....:..x.xx.x.:.x::.....:.....:..:.xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 31839335 NA +3127 chr4 + 190214555 107877885 107877884 107877941 57 TCACTCTTTCTTTCTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 + 94230402 50052659 50052658 50052715 50052659 50052658 50052715 57 TCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTTAAGTTGGA ..x....:::::....x.x....:x.:......:...............:..x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 57825226 NA +3077 chr4 + 190214555 107891064 107891063 107891114 51 TAAGTAGTCAAAATTAAAATTCTTTCCTTTTTTTTCTTTTTTTTTCCTTTT chr4 + 94230402 59382622 59382621 59382672 59382622 59382621 59382672 51 TAAGCAAACAGAATTAAATTTCTGTTCTTTTTTCTTTTTTTTTTTTCCTTT ....:.:x..:.......x....x.:.......:.:.........:.:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 48508442 NA +3549 chr4 + 190214555 107924690 107924689 107924768 79 GTGGCACACGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCAGTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--.:..:.:...........::........x.x..x...x..x.......::.:..x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 31891489 NA +3857 chr4 + 190214555 107971892 107971891 107971974 83 CATGGTGCTACACGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x.:....--......:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 31938695 NA +3446 chr4 + 190214555 108025749 108025748 108025822 74 GTGCACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGGTCGCTTGAGCCCAGGATGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:...........::........x:xx.x.::x.:.....:.....:.xx.xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 31992545 NA +3347 chr4 + 190214555 108064624 108064623 108064669 46 TAGACACTTTGTCTCTCTCTCTCTCTCTCACTCACACACACACACA chr4 + 94230402 75248043 75248042 75248088 75248043 75248042 75248088 46 TAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:.:x...:x....................x.............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 32816581 NA +3002 chr4 + 190214555 108064635 108064634 108064669 35 TCTCTCTCTCTCTCTCTCACTCACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ....................x...:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 95463330 NA +3253 chr4 + 190214555 108064635 108064634 108064673 39 TCTCTCTCTCTCTCTCTCACTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::...............x.................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 32816585 NA +3139 chr4 + 190214555 108064636 108064635 108064675 40 CTCTCTCTCTCTCTCTCACTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.............x...x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 32816587 NA +3102 chr4 + 190214555 108064638 108064637 108064673 36 CTCTCTCTCTCTCTCACTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...............x.........:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 95463334 NA +3251 chr4 + 190214555 108064714 108064713 108064786 73 CCATAGAGCCTTCTCTCTCTCTCTCTCTCACACATACACACACACGGATAATGATGTCCTAGAGCTGTGGCCA chr4 + 94230402 12601294 12601293 12601359 12601294 12601293 12601359 66 CTGTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA-------GTGCTATTGCTCTGTCCA .::..:.:.x:.......................::.........::.-------..x...xx...x..x... 48M7D18M 51/66 77.3% 66/94230402 0.0% 7/66 10.6% 95463420 NA +3359 chr4 + 190214555 108064723 108064722 108064767 45 CTTCTCTCTCTCTCTCTCTCACACATACACACACACGGATAATGA chr4 + 94230402 75248052 75248051 75248096 75248052 75248051 75248096 45 CCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagaga .:.......................:..........:..x.:x.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 32816671 NA +3489 chr4 + 190214555 108069815 108069814 108069918 104 ATGTGTGGGGGTGCATGCCTGTAATCCCAACTGCTTGAGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033194 76033193 76033289 76033194 76033193 76033289 96 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:::::.x......:.--....:.:...:..:.....:........x.xx:x...x.:...........:..x:xx:..:..:..------..x..x...... 17M2D67M6D12M 67/96 69.8% 96/94230402 0.0% 8/96 8.3% 32036621 NA +3393 chr4 + 190214555 108099496 108099495 108099585 90 GTATGTATATATATATGTGTATGTATATATAT----ATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812967 89812966 89813060 89812967 89812966 89813060 94 GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:..:..x...x..........:.x..x..::----...:..:..::x.:x:x::..:..:...x:x...................:.x..x.. 32M4I58M 62/90 68.9% 94/94230402 0.0% 4/90 4.4% 18286529 NA +3140 chr4 + 190214555 108099510 108099509 108099575 66 ATGTGTATGTATATATATATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:.....xx.:....:.:x.:x.:x.:x..............:.:.......::..:::..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 80774019 NA +3009 chr4 + 190214555 108099520 108099519 108099566 47 ATATATATATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...:..:..x..........x...:.......x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 101241910 88972645 +3075 chr4 + 190214555 108099520 108099519 108099602 83 ATATATATATATATATGTGTATATGTGT----GTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATA chr4 + 94230402 89748639 89748638 89748724 89748639 89748638 89748724 86 ATACCTAGATA-ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ...:x..x...-..:...::....:...----..:....x......:...x....:.:...:.:.:.:x.....:x.x.:.:...:. 11M1D16M4I55M 58/82 70.7% 86/94230402 0.0% 5/82 6.1% 18350881 NA +3659 chr4 + 190214555 108099539 108099538 108099621 83 TATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x...:.............:.xx..:..x::...:....:..x...:..:.x...::.:.:...:.:.x.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 22265006 NA +3428 chr4 + 190214555 108099543 108099542 108099621 79 TGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATA-------TATATAAAT chr4 + 94230402 79265520 79265519 79265605 79265520 79265519 79265605 86 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAAT ............:.........xx...:....:...:.::.:.::.:.:::.x.:....x.:.:.x:.:.-------......... 70M7I9M 56/79 70.9% 86/94230402 0.0% 7/79 8.9% 28834023 NA +3057 chr4 + 190214555 108099546 108099545 108099616 71 GTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ..........:..::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.:.x:.:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 28834027 NA +3576 chr4 + 190214555 108099551 108099550 108099622 72 TGTGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAATA chr4 + 94230402 85834541 85834540 85834612 85834541 85834540 85834612 72 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .....x...............:...xx..:..x::...:....:..x...:..:.x...::.:.:...x.:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 22265010 NA +3112 chr4 + 190214555 108099553 108099552 108099622 70 TGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAATA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...:.x.............:.:...xx..:..x::...:....:..x...:..:.x...::.:.:.x.:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 22265012 NA +3096 chr4 + 190214555 108099564 108099563 108099624 61 GTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAAATAAT chr4 + 94230402 9891167 9891166 9891227 9891167 9891166 9891227 61 GTGTGTGTTTATATATCTATATACCTATATATGTATATCCATGATCATTTCTATCAATAAT ........x.......x......:x.......:.....x:..:xx:..x.x...x...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 98208397 92006158 +3891 chr4 + 190214555 108101919 108101918 108101989 71 ACATGGTGGCATGCGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCCATGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....--...:.x......:...........:.........x.xx.x...x............x:.. 9M2D60M 56/69 81.2% 69/94230402 0.0% 2/69 2.9% 32068723 NA +3233 chr4 + 190214555 108119979 108119978 108120045 67 TGTATATTTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATA chr4 + 94230402 85834524 85834523 85834590 85834524 85834523 85834590 67 TGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATA ..x:.x......x:..x.....x.................:.xx:...:x.::..::......x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 22285455 NA +3078 chr4 + 190214555 108119986 108119985 108120049 64 TTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATTTA chr4 + 94230402 85834535 85834534 85834598 85834535 85834534 85834598 64 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA ..:..x.:...x.................:.xx:...:x.::.:::......x:..:..:.... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 22285451 NA +3502 chr4 + 190214555 108123413 108123412 108123539 127 CAGCTTTCTGCTAGGGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACCTATTAGTCTACTTTTTATCCTGCGTACCCTACAAGATAGAATCTGAAGCCTGGTTCATCACATTCTACAACAGCC chr4 + 94230402 41690911 41690910 41691023 41690911 41690910 41691023 113 CAGCTCTGATTTTGGATTAGTCTTTTTTTTTTTTTTCTTTTCCTTCTAAACCTG---------TTTTTCTTCTAAGCACCTTAGAA-----ATTCTGCTGCATAGGTCTGAATTCTCTGCAAGAGCC .....:.xxx:.x..:..:..:..............:....::..:.......:---------.....x.:..:x.:...:..x..-----.x....xx..x.:.x..xxx.:x:...:...x.... 54M9D23M5D36M 78/113 69.0% 113/94230402 0.0% 14/113 12.4% 66432502 NA +3618 chr4 + 190214555 108149581 108149580 108149668 88 GTGTGTATATATTTGTGTGTATATATGTACATATATATACATGTGTATATATATGTACATATATGTACATGTGTATATATATATATAA chr4 + 94230402 21109201 21109200 21109288 21109201 21109200 21109288 88 GTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGA ......x.x.:.xx.:..:.x.........x:.:......x:.....:x....:...::..:x::.:.x.x...:.....:.:...:. 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 87040380 NA +3006 chr4 + 190214555 108149611 108149610 108149671 61 ATATATATACATGTGTATATATATGTACATATATGTACATGTGTATATATATATATAACTG chr4 + 94230402 76709593 76709592 76709653 76709593 76709592 76709653 61 ATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTG ........:.......x....:.x.:.:x:.:.....::...:.x.:.:.x......x... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 31440018 NA +3403 chr4 + 190214555 108157133 108157132 108157206 74 ATATCTACCTCTTCATTCTCTCTCTCTCTCTCTCTCTATATATATATACACACACACACACACACACACACACA chr4 + 94230402 60831527 60831526 60831593 60831527 60831526 60831593 67 aTATCTATCTCTG-------TCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA .......:....x-------.............x.x.......:.:..:........:.....x:x:.x.:... 13M7D54M 53/67 79.1% 67/94230402 0.0% 7/67 10.4% 47325606 NA +3254 chr4 + 190214555 108157149 108157148 108157212 64 TCTCTCTCTCTCTCTCTCTCTATATATATATACACACACACACACACACACACACACACACACA chr4 + 94230402 60831530 60831529 60831593 60831530 60831529 60831593 64 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA ...x.....x...........x.:.:......:::::.:........:.....x:x:.x.:... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 47325619 NA +3450 chr4 + 190214555 108157149 108157148 108157208 60 TCTCTCTCTCTCTCTCTCTCTATATATATATACACACACACACACACACACACACACACA chr4 + 94230402 60831534 60831533 60831593 60831534 60831533 60831593 60 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA .....x.............x.:.......:.::.:........:.....x:x:.x.:... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 47325615 NA +3422 chr4 + 190214555 108157151 108157150 108157210 60 TCTCTCTCTCTCTCTCTCTATATATATATACACACACACACACACACACACACACACACA chr4 + 94230402 60831534 60831533 60831593 60831534 60831533 60831593 60 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACA .....x.............:.:.......::::.:........:.....x:x:.x.:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 47325617 NA +3504 chr4 + 190214555 108180166 108180165 108180239 74 GTGCGCCAGTAGTTCCAGCTAGTCAGGAGGCTAAGGCAAGAAGAGCACTTGAGCCCAGGAGTTTGAGGCTTCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.xx.............x.::::.....:..x.xx.x::.........:.....:..:..x:....x:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 32146962 NA +3913 chr4 + 190214555 108180411 108180410 108180579 169 AGAAGGAAGAAGAAGGAGAAAAAGAAAGAGGAAGAGG---AGAAGAGGAAGCAAAAA--------GAAGAGGGAAGAGAAAGAAGGAGAAAAAGAGAAGAAAGGAAGAGAAGGGGAAGAAAAGGAGATGAAG---------------AGGAGGAAGGAAGAGAAGGAAGAAGGAGAAAAAAATGGAAGAGAAGAG chr4 + 94230402 65771128 65771127 65771322 65771128 65771127 65771322 195 AAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAG .:....x...:...x::.:x...x.....x::.:.x:---:.x..:.xx.....:..--------.....xx..:..:...:.::..:x........::....x.x:.:..xx:..:....:::::..x.::---------------..........:......x:.:x......x.x.:..x.x..x.:x.:.. 37M3I17M8I67M15I48M 107/169 63.3% 195/94230402 0.0% 26/169 15.4% 42409283 NA +3253 chr4 + 190214555 108180416 108180415 108180480 65 GAAGAAGAAGGAGAAAAAGAAAGAGGAAGAGGAGAAGAGGAAGCAAAAAGAAGAGGGAAGAGAAA chr4 + 94230402 21369208 21369207 21369272 21369208 21369207 21369272 65 GAAGAGGAAGGAGGCAAAGAAAAAGGAACAAAATTAGGGAAAAAAATAGGAAGCAAGAAGAGAAA .....:.......:x.......:.....x.::.xx..:.:..:x..x.:....x::......... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 86811208 NA +3253 chr4 + 190214555 108180455 108180454 108180562 108 GAAGCAAAAAGAAGAGGGAAGAGAAAGAAGGAGAAAAAGAGAAGAAAGGAAGAGAAGGGGAAGAAAAGGAGATGAAGAGGAGGAAGGAAGAGAAGGAAGAAGGAGAAA chr4 + 94230402 77211991 77211990 77212098 77211991 77211990 77212098 108 GAGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAGAGTTTACTGATGAGAATGAAAGACAAAAAGCAATGTGAAGCAA ..::....x..:.:......:::...x:::....::::::::...:.....x....x....::.:.:xxx:x...x...:.x...:..x:.:...x..x:x.:..x.. 108M 63/108 58.3% 108/94230402 0.0% 0/108 0.0% 30968464 NA +3348 chr4 + 190214555 108180540 108180539 108180681 142 GGAAGAGAAGGAAGAAGGAGAAAAAAATGG------AAGAGAAGAGGAAGAGGAGGAGTAAGAGGAGAAGAGGAAGAAGAAGGAGAAGAA--AACAAGGAGGAAGAGAAAGAATAAGGAGAAAAGGAAGAGGAGAAGAGGAAGAAGAAAA chr4 + 94230402 84536572 84536571 84536719 84536572 84536571 84536719 148 GAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACA--GAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAA .:...:...:...:..::x:.x......:.------....:..:...:.:...::...x....:.xx.x.x:.x.:..xx..x..xx...--.x:x.:...:....x...x.--:.:.:..xx:...:..:....xx.:....:x:.... 30M6I54M2I20M2D36M 89/140 63.6% 148/94230402 0.0% 10/140 7.1% 23643968 NA +4836 chr4 + 190214555 108180608 108180607 108180840 233 AGAAGAAGGAGAAGAAAACAAG--GAGGA-AGAGAAAGAATAAGGAGAAAAGGAAGAGGAGAAGAGGAAGAAGAAAAAGGAAGAGGAAAAGAGAAAAAGAAAGGAGGAGGAGGGAAGAGAAGGAAGAAGAAGGAGAAAAGTAGAGAAAGAGGAAGAGGAGATGAAGAGGAAGAGGAAAAGAAGAGGGAAGAGAAGGAAGAAGGAGAA--AAAGAGAA--------AGAAGAAAGAGGAAGAGAAGA chr4 + 94230402 1317354 1317353 1317596 1317354 1317353 1317596 243 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGA--AAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAG-AGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGA ...:::x:....:.x.x.....--:....-:........x.xx::.:x.:x:...x.:..xx...........:.......--.:..:..:.....x..xx.::.x...:..x.:.:.x:..xx..:..:::.:...:..-....x.x:..x::..:..:..xx:..xxx...::::...::x..xx.xx:...x.:.:.......:--..:....:--------..x.:..x:.x.::....... 22M2I5M1I51M2D57M1D66M2I8M8I21M 143/230 62.2% 243/94230402 0.0% 16/230 7.0% 106863254 83351301 +3186 chr4 + 190214555 108196193 108196192 108196266 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAAACAGGAGAACTGCTCGAACCCGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::.......:x.xx.x...x::..:......:.:..x.xx:.x:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 32162989 NA +3190 chr4 + 190214555 108214703 108214702 108214790 88 TGTGTGTATATATGTATATATGTATATATGTGTGTGTATATA------TATATATGTGTATATATTATATATATAGTATTTGGGAAAAGACAGA chr4 + 94230402 86633930 86633929 86634023 86633930 86633929 86634023 94 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAAGATGAAGATGGTCTTAGAGAAAAATCTGA ..:...::..x:.:...:.x......:...:...........------...::..x.....:x.xx..:x.x..:..x..x.:.....:x.x.. 42M6I46M 61/88 69.3% 94/94230402 0.0% 6/88 6.8% 21580773 NA +3358 chr4 + 190214555 108214725 108214724 108214809 85 TATATATGTGTGTGTATATATATATATGTGTATATATTATATATATAGTATTTGGGAAAAGAC--AGAGTATGTATAAATAATTGAA chr4 + 94230402 21429717 21429716 21429803 21429717 21429716 21429803 87 TATATATGTGTGTGTATATATATATATGTAAACAAGTCAACTTCATAGTATACTGGATAAAATCAAGAAGTTCTGTAGATACTTAAA .............................:x.:.x:.:.xx.x:.......x:x...x..:.:--...:xx.x.:..:...x..:.. 63M2I22M 61/85 71.8% 87/94230402 0.0% 2/85 2.4% 86785008 NA +3460 chr4 + 190214555 108218306 108218305 108218372 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 32185095 NA +3064 chr4 + 190214555 108229263 108229262 108229396 134 TATGTTTGTTAAAGTTAAAATAAACAAAAGCTAATAAAAAAGAAGGGGTGGAAAAAGCAAG---------------------------TATAAAAAATATAA-----ATTAAAAGCACAAGATAAGATGGCAGGAAAGAGACTAAACTGGCCTTATTTA-ATATATT chr4 + 94230402 5778650 5778649 5778805 5778650 5778649 5778805 156 TATGCTGGTTGAAGGAAAAATAAATAAATAAGAATAGAAGAGAAGGGATGGAGAAAGACAGAAATGAGAGAGAAGTAAGCACACCTATTACAGAAAAGCTAATGAATATCAAAAAAACAAGGGAA------AGGAAAAAGGTTA-----GCTATATGTATATATATT ....:.x...:...xx........:...x:xx....:..:.......:....:....xx..---------------------------..:.:....xx...-----..:....:x.....:x..------......:..::..-----..:x...x..-....... 61M27I14M5I18M6D13M5D10M1I7M 92/123 74.8% 156/94230402 0.0% 44/123 35.8% 102450613 87763942 +3100 chr4 + 190214555 108247377 108247376 108247433 57 TATATATATATATATATATATATATATATGTAGTGAATTAGAAACTAGAAAGGCACA chr4 + 94230402 66522439 66522438 66522495 66522439 66522438 66522495 57 TGCACAAATATATATATGTATATATATATGTGATGCAGAAGAAGCTAAAAAGTCATA .::.:.x..........:.............::..x.xx....:...:....x..:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 41724938 NA +3372 chr4 + 190214555 108252438 108252437 108252514 77 CCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA---TATATATATATGAAATCTGATA chr4 + 94230402 4618351 4618350 4618430 4618351 4618350 4618430 80 CTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATA .:.x.x.::.x.......::..............x:....::......x.x....---....x......x.x..x.x... 55M3I22M 58/77 75.3% 80/94230402 0.0% 3/77 3.9% 103634087 86580468 +3076 chr4 + 190214555 108275828 108275827 108275926 99 TAGTTAATAGCATCTGCTGTAGGGAAATTGATACAGTTAAATTTTTATGC----TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAT chr4 + 94230402 81889383 81889382 81889484 81889383 81889382 81889484 102 TAATTCACAGTAT-TATTCTAGTTAAGAAAATATAGGTATACTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACAT ..:..x.:..:..-.::.x...xx..:xx:...:..x..x.:..x...xx----..:......:.:x......:......:......x.x...:...:..:.. 13M1D36M4I49M 67/98 68.4% 102/94230402 0.0% 5/98 5.1% 26386445 NA +3728 chr4 + 190214555 108275869 108275868 108275944 76 TTTTTATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA---TATACACATTTTATTTATT chr4 + 94230402 4618349 4618348 4618427 4618349 4618348 4618427 79 TTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT ..:..:...::.x.......::..............::x...::......x.x....---....x.:..x....x.... 57M3I19M 58/76 76.3% 79/94230402 0.0% 3/76 3.9% 103657520 86557035 +3465 chr4 + 190214555 108275878 108275877 108275948 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATACACATTTTAT-TTATTTATT chr4 + 94230402 4618362 4618361 4618434 4618362 4618361 4618434 73 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTT .......::..............x:....::......x.x......-....x.:.:...x...-....x.:.. 46M1I16M1I9M 57/71 80.3% 73/94230402 0.0% 2/71 2.8% 103657516 86557039 +3215 chr4 + 190214555 108275880 108275879 108275936 57 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATACACATTT chr4 + 94230402 60831530 60831529 60831586 60831530 60831529 60831586 57 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCT ...x.....x.............x.:.......:.:....:.:.:.:::....x.:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 47444350 NA +3624 chr4 + 190214555 108275882 108275881 108275975 94 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATACACATTTT---ATTTATTTATTT-----------ATTTGTTTATTTTTGAGATAAAGTCT chr4 + 94230402 60831530 60831529 60831637 60831530 60831529 60831637 108 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCTCATAAGATCT ...x.....x.............:.:.......:.:....:.:.:.::....:..:---..x:......x.-----------..x...x...x...xxx....::... 56M3I12M11I26M 70/94 74.5% 108/94230402 0.0% 14/94 14.9% 47444352 NA +3101 chr4 + 190214555 108275884 108275883 108275954 71 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATACACAT-TTTATTTATTTATTTATTTG chr4 + 94230402 60831530 60831529 60831601 60831530 60831529 60831601 72 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG ...x.....x...........x.:.:.......:.:....:.:.:..:..:-:..x.xx..x:......x.. 51M1I20M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% 47444354 NA +3706 chr4 + 190214555 108298513 108298512 108298711 199 CTGACGTTTTATATTGTAAAGATAATATAAACATGACAATTTGTCGCTTTTACTGATTTTT-------TCTT----AGTCTATTTGCCTTCTTATTTTAATATTTATAATTTTAAAAAAATTTTAAGAGAATTTCTTTCTTTCTTTCTTTCCTTTTCCTTTTCCTATTTTTTTTTTTTTTTTTTGAAACAGGATCTTGCTCCATCACCCA chr4 + 94230402 60940478 60940477 60940679 60940478 60940477 60940679 202 CTCATCTTTAATTCAGTAAAAACAAAATATGTACAACAACTTGATGCATTTCCAGGCCTTTGGAGGTTTCGTTGGAAGGCTACCCACTCTAATGATTTCCTGTT-GTAATTGCACAAAAA-------GGAGTTTCCTCCTTATTCATTTGCATCTTTCTTGTCCCACTTTTTTTTTTTTTTTCAGTGAGATGATTTAGCACTAGTGTCCA ..x.:x...x..x:x.....:.:..x...x::.::....:...x:..x...x.x.:::...-------..x.----..x...::::.::.xx.:x...xx.:..-:.....x:.x.....-------:..:....:.:...x:.:x:..x.x.:..:...x...:.:...............:x.x:.x.x...:.x..x.:.x:::... 61M7I4M4I28M1D15M7D83M 118/191 61.8% 202/94230402 0.0% 19/191 9.9% 47358035 NA +3879 chr4 + 190214555 108302547 108302546 108302625 79 GTGGTGCACACCTGTAGTACCAGCTACTCAGGAGGCTGAGGCAGGCGAATCACTTGAACCCAGCAGGCGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......x.........::::........x.xx.:...x.............x..x:xx:.....:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 32269346 NA +3512 chr4 + 190214555 108303148 108303147 108303230 83 CATGGTCATGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGAAGGCGGAGGTTGGAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x:....:.--....:.:...........::........x.xx.x...x..........::....x:xx:..:..x.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 32269951 NA +3686 chr4 + 190214555 108312016 108312015 108312220 205 TTGCTAAACCAGAGATCCATAAGTGAGTAAACAGAAT----GTGAGTAGGATTCAGGGAGGTGATGCCCCTGAAGTCTTAATTCTCTGTGCATA---------ATTCTCCAATTGTGTGCAAATGCTTGAAACAGGAAGGAAGGAAGGAAGGAGGAAGGAGAACTTGTGAGGGTAAGAAGAAGGAAGGAAGGAAGGAAA---GAAGGAAGGAGGGAAGGAA chr4 + 94230402 13662664 13662663 13662878 13662664 13662663 13662878 215 TTGTTAAAACATAAGCCTGAAGAAAAATATGCAGCAAAACAGTGAGCAAAACTCCTGTAAG----GCCCCCATGGTCTCAGAGCACTGTATGTCTTCATGGTTACTCTACTCTTGTCTGGAGATGGT--AAGCAGGAAGGAAGCAAAGGAGGAGGAAAAAGTTCTTTTAAAGAAGGCAAACATGAGGAAAGGATGTAAATGGAAAAGAAAGGGTGAGGAAA ...:....x..x.:::.::x.::x:.:..x:...x.x----.....:.::.:..xx.x.:.----.....::x:....:.:xx.x....:::.x---------.:...x.xx....x..x.:...x.--..:...........x..:.:........::..xx...x.:.:.:x::x..:x.x..:.:.....x.x...---:..:...:.:.x..:.:.. 37M4I20M4D29M9I24M2D70M3I19M 122/199 61.3% 215/94230402 0.0% 22/199 11.1% 94649352 NA +3611 chr4 + 190214555 108312138 108312137 108312322 185 GAAGGAAGGAAGGAAGGAGGAAGGA-GAACTTGTGAGGGTAAGAAGAAGGAAGGAA--GGAAGGAAAGAAGGAAGGAGGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGAAGGAAAGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGAA chr4 + 94230402 2498470 2498469 2498657 2498470 2498469 2498657 188 GAGGGGGGTGAGGCGGGTGCGGGGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ..:..::.x:...x:..x.x::...-.:.:x.:.x.:.:x.x.:......:.:x..--..:..x::x..x..x..x.:.x:x:.:..:x::.:..x..x:..x.xx..::x..:.:....:::.x..:..:..xxxxx:....:....:.:...::........:.x.::.x:...:...:x:..:.. 25M1I30M2I130M 103/185 55.7% 188/94230402 0.0% 3/185 1.6% 105813668 84400887 +3252 chr4 + 190214555 108316414 108316413 108316489 76 GACCTTGGGCGAGTTACTTAATCTTTCTGAATCTTGGTTTTCTCAACTGTAAAATGCCAACACCAATAACTTCCTA chr4 + 94230402 83501141 83501140 83501216 83501141 83501140 83501216 76 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTA ...::.....:.:........:..x.x..x::..::......:..x..........xx:x::x:.:...:.x.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 24815273 NA +3009 chr4 + 190214555 108411351 108411350 108411405 55 GGAAAGGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 24202362 24202361 24202416 24202362 24202361 24202416 55 GGAAAGGAAAGGGAAGAAGGGAAGAACACCAACACCAAAGAAAAAAAGAAAAAAA ............:.....:.:.....x:xx.:x.xx.......:.......:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 84208989 NA +3090 chr4 + 190214555 108435297 108435296 108435384 88 ATTTTGAAAACTCACAGATGAAAGATATTAGGCAAATGCTGGTTATCATCAAAGCCTTAAAGGCAATTTTAATAACTTAACTTTTCAA chr4 + 94230402 54040530 54040529 54040617 54040530 54040529 54040617 88 ACTTTGGGATTTCTAAGCAGAACAAGGTTAAGTAAAAGCTGTTTATGACCAGAGCTTTTAATGTAACTTTCATACCTGCACTTTTTAA .:....::.x:..xx..xx...x:.x:...:.:...x....x....x.:..:...:..x..x.:..:...x...x..xx......:.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 54394767 NA +3518 chr4 + 190214555 108441943 108441942 108442024 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAAGCTGAGACAGGAGAATCACTTGAACCCAGGAGGTGGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::.:......x.xx.x...x.............:..x.xx:.::..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 32408742 NA +3008 chr4 + 190214555 108448961 108448960 108449038 78 AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAGAAAAAAAGATTTAA chr4 + 94230402 78963408 78963407 78963485 78963408 78963407 78963485 78 AAAAAAGAAAAGAAAAAAGTTAAGAAAAATGTAGAAAAAGTAAGACTGAAATCAAAGGTTAAGGAAATAAAGCCTGAA ......:....:......:xx......:.x:x.:.:....x....xx....xx...:.xx..:....x....x:.x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 29485553 NA +3257 chr4 + 190214555 108448974 108448973 108449107 134 AAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAGAAAAAAAGATTTAATTGAATTGAGGCTCA---TCATTTTAAAT-CAGCTTTAAAATATTATTTGATCATGATGTTCACTTCTATGAA chr4 + 94230402 86644217 86644216 86644351 86644217 86644216 86644351 135 AAAAAAAAAATGAAGCAATTAGAAAAGAAGGAAGAAAAGAAAAAAGCTAAGAAAAA---GTCTAACTAACTTAAAAATAGCTTTTATTGTAACCATAACTAACAAATATTTTTCTGCAATATATTTCATTTTTGTGAA ..........x:...x..xx.::......:...::.........:.xx........---:.:...:.:.x..:.::x.x:---.:...x...x:-:.:..xxx.......x..:x::x..:xxx....:..:.:.... 56M3D21M3I11M1I43M 85/131 64.9% 135/94230402 0.0% 7/131 5.3% 21804757 NA +3281 chr4 + 190214555 108470922 108470921 108470977 56 AAAAAAAAACAAAAACAAACAAACAAAAAAACCCATAATACAATTTACCATTTATA chr4 + 94230402 74462607 74462606 74462660 74462607 74462606 74462660 54 AAAGATAAACAAAAACAAACAAACAAAAAAACCCACA--ACAACCTTGCACTTATA ...:.x.............................:.--....::.xx..:..... 37M2D17M 46/54 85.2% 54/94230402 0.0% 2/54 3.7% 34008315 NA +3066 chr4 + 190214555 108470923 108470922 108470955 33 AAAAAAAACAAAAACAAACAAACAAAAAAACCC chr4 + 94230402 45330848 45330847 45330880 45330848 45330847 45330880 33 AAAAAAAACAAAAACAAACAAACAAAAAAACCC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 63140075 NA +3054 chr4 + 190214555 108477101 108477100 108477164 64 TACCACTTTGTAAAATGTGGACACACACACACTCACACACACACAC----ACACACAGACACACATAA chr4 + 94230402 46140842 46140841 46140909 46140842 46140841 46140909 68 TATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAA ..::.:.....:x...:.:x.:........x......:........----.:.:......x:...x.. 46M4I18M 48/64 75.0% 68/94230402 0.0% 4/64 6.2% 62336259 NA +3335 chr4 + 190214555 108535412 108535411 108535482 71 GTGCACCTGTAATCCCAGCTAATCGGGAAGCTGAGGCATGAGAATCACTCAAACTCAGGAGGTAGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x....:.:.......x.:.::.:......x.x..x...x....::...:...:..x.xx:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 32502208 NA +6332 chr4 + 190214555 108536514 108536513 108536743 230 CAAAAAAAGTTAAGACCGGAAGGTAGATTTAGTTTTA-ATGAAGTGTTCTTCTTTTACCTTGCTTTTATGTTGCTCCTTTTTATCTCTTCATCAAGGAAACTGTATTCCTTCAAACCTCAGAGTATAATAAATAACTTACAAGGATGC-ACAATTGTACATTACTCTCTTGACAGGGTGACTCAACACTGATAGGTATTATCTATATTCTTTAAATGGTTCCCTGCAGGACT chr4 + 94230402 39042817 39042816 39043040 39042817 39042816 39043040 224 CAGAGAAAGAGGAGACAAGAAG-TAGAATCAGTTTAATAAGAA----TTTTCTTTCACCCAAGTTTTATGTTCTCTTCTTTTATCTTTTTATCAAGGCAACTGTATTCTGAAAAGCCTCAGGGTACAATAAACAACAGAAGGTGATGCAATGGCTGCTCGTTA-TTGCTTGAT-GGTTGAATC-ATTCTACTAGCTGTTATCTGTATTATTGGAACAGATCACTCGAGGGTT ..:.:....xx:....x:....-....x.:.....x.-.x...----.:......:...:x:x.........x:::::........:..:.......x..........:xxx..:......:...:......:...xx.x::x.....-.::::..:x.:...-.:x.....:-..x...x..-.:x..:x...x.:......:....x..x:..::.x..x..xx...::. 22M1D14M1I5M4D101M1I14M1D9M1D9M1D48M 152/222 68.5% 224/94230402 0.0% 10/222 4.5% 69493697 NA +3407 chr4 + 190214555 108540009 108540008 108540078 70 CAGTGGCTCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATCACTTGACCCCAGAAGTT chr4 + 94230402 76033199 76033198 76033266 76033199 76033198 76033266 68 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......:x...:--....:.:...........::........x:xx.x.:.x.......x........:. 12M2D56M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 32506810 NA +3101 chr4 + 190214555 108541634 108541633 108541715 82 CACCTATGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGGGTCCAGGAGGTTGAGGTTGCAGTGAACCATGAT chr4 + 94230402 76033207 76033206 76033285 76033207 76033206 76033285 79 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGAT ...x.:.:..:...........::........x:xx.x.:.x::....:::....:..x..x:..:..:..---.x...... 71M3D8M 54/79 68.4% 79/94230402 0.0% 3/79 3.8% 32508427 NA +3297 chr4 + 190214555 108564032 108564031 108564102 71 TCATTTTATAGATGAGGAAACTGAAGTTGAACGAGTTTAAGTAACTTGCCTAAACTCATACAGCTAGTAAG chr4 + 94230402 82283126 82283125 82283196 82283126 82283125 82283196 71 TCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG ......:...x...:........::::xx.:xx..x......:...x:.....:x...:....:....:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 26280906 NA +3861 chr4 + 190214555 108573533 108573532 108573611 79 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACTCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:...........::........x.xx.x...x.:.......:......x.xx:..:..:.. 6M2D71M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 32540332 NA +3383 chr4 + 190214555 108575465 108575464 108575539 75 AACACTTTATATATATATATATGTATATAACATATATACACATATATGTTATATATTTATAT---ATATGTTTTATAC chr4 + 94230402 25301632 25301631 25301709 25301632 25301631 25301709 78 AACACTTTATATATATATATATATGTAAACCATATATATTTCAATGTATTCTTCATATACATTAAAAATGCTTTATAC ......................:.:..x.x........:x:xx..:.:..x.x:..x..:..---.x...:....... 62M3I13M 57/75 76.0% 78/94230402 0.0% 3/75 4.0% 83273833 NA +3117 chr4 + 190214555 108575500 108575499 108575558 59 ATACACATATATGTTATATATTTATATATATGTTTTATACATATATATATATAGAGAGA chr4 + 94230402 17668394 17668393 17668452 17668394 17668393 17668452 59 ATATAGATGTATTTTTTAAATGTATATATATGTTTTAAACTCATATATATACAGCGGGA ...:.x..:...x..x..x..x...............x..x:.........:..x.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 90907106 NA +3022 chr4 + 190214555 108575510 108575509 108575566 57 ATGTTATATATTTATATATATGTTTTATACATATATATATATAGAGAGAGAGAGAGA chr4 + 94230402 22934828 22934827 22934884 22934828 22934827 22934884 57 ATACTATATACATACATATATATATAGTGTGTGTGTGCATATAGAGAGAGAGAGAGA ..::......:x..:......:.x.x:.:::.:.:.::................... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 85640682 NA +3207 chr4 + 190214555 108576125 108576124 108576216 92 GTGCATCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGAAGAATGGCTTGAACCGGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....:x......:.........:x.:........x.xx:x...xx:........x:.:..x.xx:..:..:..------..x..x...... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 32542921 NA +3504 chr4 + 190214555 108576827 108576826 108576891 65 GTGGTGCACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..........--....:.............::........x.xx.x...x.:.....:..::.:. 10M2D53M 50/63 79.4% 63/94230402 0.0% 2/63 3.2% 32543626 NA +3001 chr4 + 190214555 108580272 108580271 108580330 59 ACCCTGTTTCAAACAAACAAACAAACAAACAAACAAAAACAAACCAACAAAAAAGAAAA chr4 + 94230402 33725393 33725392 33725451 33725393 33725392 33725451 59 ACTTTACTAAAAATAAACAACTAAGCAAACAAACAAAAACAATGCAACAACAACAAAAA ..::.::.xx...:......x:..:.................xx......x..x:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 74854879 NA +3118 chr4 + 190214555 108585053 108585052 108585098 46 GGAGAGG-TGCAGTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTGT chr4 + 94230402 83973567 83973566 83973613 83973567 83973566 83973613 47 GGAGAGGATACAGGTTTTTTTGTTTTTGTTTTGTTTTGTTTTTTTGT .......-.:...x.....x.x......................... 7M1I39M 42/46 91.3% 47/94230402 0.0% 1/46 2.2% 24611486 NA +4288 chr4 + 190214555 108591623 108591622 108591862 240 CTGCACTCCAGCCTAGGTGACAGAGTGAGACTCTGGAAAAAAAAAAAAAGAAGAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAA--AGAAAGAAAGAAAAGAGAGAGAAGGAA-------AGAAAGAAAGAAAGAAAGAAAGAAAG-------AAAGAG---AAAGAAAGAAAGAGAGA chr4 + 94230402 67346698 67346697 67346949 67346698 67346697 67346949 252 CTGAACACCACACTAATTAACAAAGGTAAAGACAGGGAGAAACAAGCCA-ACGTGTATGGCAGGAATGAGGCAAATGAAACAGATGTTAGAGGGAAACAGAGGGAAGGATAGATG------GCAAAGGGGGAACTGGGAAAGAAGCACAGAGTCAGGAAAGGAACAAGCAGTAAAGAAAGGAGAGGGAAATAAGTATATCAGGCAGAAAAAGACAAAGAGAGGGAGCTGGTATAATGAGCTACAAAAAAGAAAAAGAAA ...x..x...xx...:x.:...:..xx.:.xx.x..:.:...x..:xx.-.x.x:x.x:.x.:...x...:x...x::.:x::.x.xx...::..:.x.......:...x::.x.------.x..:.::.:..xx::.......:x.x....xx..::......--..x.:x.......:.....:...:x..-------..:x.....:.:.x.....:..::..-------..x...---x..:.......:...:. 49M1D65M6D43M2I27M7I26M7I6M3I17M 147/233 63.1% 252/94230402 0.0% 26/233 11.2% 41244925 NA +6070 chr4 + 190214555 108591652 108591651 108591857 206 ACTCTGGAAAAAAAAAAAAAGAAGAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAG--------------------GAAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAA---AGAAAGAAAGAAAAGAGAGAGAAGGAA-------------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAG chr4 + 94230402 5778543 5778542 5778784 5778543 5778542 5778784 242 ACTCAAGAGTaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGATGAAAAAGGATGAAAGAAATATTTATGAGAAGAGATGAAATGTGGAAAAAGAATGGTGGTCATATGCTGGTTGAAGGAAAAATAAATAAATAAGAATAGAAGAGAAGGGATGGAGAAAGACAGAAATGAGAGAGAAGTAAGCACACCTATTACAGAAAAGCTAATGAATATCAAAAAAACAAGGGAAAGGAAAAAGG ....x:..:x..:.......:..:..:...:...:...:.:..:.x..:.:..:.x........x.xxx.x::.:..:..x....x:x....::.::--------------------....:..:..x:..x:..x....:x:::........:.---.......x.....x..........x..-------------.....::xx:.x::.x.xx..:...:x...:.....:..:..:. 97M20I38M3I27M13I44M 137/206 66.5% 242/94230402 0.0% 36/206 17.5% 102813109 87401446 +3478 chr4 + 190214555 108591681 108591680 108591815 135 AGAAAGAAAGAG--AGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAAAAGAGAGAGAAGGAAAG chr4 + 94230402 51148379 51148378 51148515 51148379 51148378 51148515 137 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAG ........::..--.x.:.........:.........x...::xxx:..:xx:::.x:...x:x:.:::.x:...:.:...:..:.....:...:..x..x:xxxx:...x.x...:...::...x.x.xx..::.. 12M2I123M 81/135 60.0% 137/94230402 0.0% 2/135 1.5% 57443302 NA +3643 chr4 + 190214555 108591717 108591716 108591851 135 AGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGG---AAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAAAAGAGAGAGAAGGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 89498611 89498610 89498752 89498611 89498610 89498752 142 AAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGATTAATTAGAGTCTTACAGAGGAGAACAAAGAGCAAGGA .:...:.x...:..:::x..:..x.x....:.:---.::.:..x..:..:x...x..:...:...x::.x...x........:.:....x..:x.::.:..::.xx..xx.:..----.x...::::..x......x...:. 33M3I78M4I24M 84/135 62.2% 142/94230402 0.0% 7/135 5.2% 19093106 NA +3620 chr4 + 190214555 108591759 108591758 108591881 123 AGAAAGAAAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAAAAGAG-AGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........:...xx.x.......::..:.........x.:...xx-...:xx.:..x.:..x.x:..::.x:...:.:...:..:..:..:..::..x..x:xxxx::..x.x...:...:.:. 45M1I78M 77/123 62.6% 124/94230402 0.0% 1/123 0.8% 57443380 NA +3133 chr4 + 190214555 108591790 108591789 108591871 82 AAGAAAGAAAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGG chr4 + 94230402 86089083 86089082 86089164 86089083 86089082 86089164 82 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGG .:..:.::::.:.:..x.x...:..:...:...:.....x..:::...x...x:.......:...x..x:.::.x.::.:.. 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 22502707 NA +3350 chr4 + 190214555 108591794 108591793 108591980 187 AAGAAAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 78372867 78372866 78373050 78372867 78372866 78373050 184 AAGTAAAGGGAATGAA---AACAAAGAGGGAAGGAAAGGAATTAGAGAAGCAGAGAAATCAAAGGGAGGTTTAAGAGCAAAGCCAGCTTCGGTAGAGATCACAAGGAAAGAATAAAACCAAGAAGGAAAGGAGAATAAGAGCAACTGAGGGAGGGATATTGGTGGTTATGGGGAGGAAATAAAGGGA ...x....:..:x...---..x.....::...:.....:..xx.:::...x::.::..xx....:...:xxx.::..x....xx..xxxx:.x.:::.xx.x..:.......x:...xx.....:.....:.::.x.::.:x..xx:.:.:.:.:.x.xx::x..xx:x::...:.:..x:....:. 16M3D168M 103/184 56.0% 184/94230402 0.0% 3/184 1.6% 30218927 NA +4222 chr4 + 190214555 108591802 108591801 108591951 150 AGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAA-------AGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 + 94230402 84536569 84536568 84536725 84536569 84536568 84536725 157 AGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAA-AGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAA ..:..:.:.........:...x..x:...:x.:...:x:....:...-.::.....:.....::.....xx.x.x.:x..-------..xx:...x.xxx..:.......x.:.x....:.:.x-.::..:....:.xx.....:.x..:..xx.... 47M1D32M7I37M1I33M 99/149 66.4% 157/94230402 0.0% 9/149 6.0% 24055233 NA +3128 chr4 + 190214555 108591814 108591813 108591884 71 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGA chr4 + 94230402 75241507 75241506 75241577 75241507 75241506 75241577 71 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAA ...x..:..:x.:...xx.x...x.......:....:........:.:.:.x..:.xx.:......x..:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 33350307 NA +3639 chr4 + 190214555 108591836 108591835 108592002 167 AAAGAAAGAGAAAGAAAGAAAGAGAGAG-AGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGA-------------AGGAAGGAAGGAAGGAAGAGAAAAGCA chr4 + 94230402 49044653 49044652 49044823 49044653 49044652 49044823 171 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACA-----AGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAA-----GAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCA .....xx:.::.::......x:.....x-..:.:x..xx.......x.-----..x.:x:.:...x.xx..:x:.::..:.:....:xx..........-----.....:x::....x.....:..:...:...x....x.-------------......:::.:..:x:..x:.x..... 28M1I19M5D46M5D37M13I27M 103/157 65.6% 171/94230402 0.0% 24/157 15.3% 59547183 NA +3426 chr4 + 190214555 108591838 108591837 108591949 112 AGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAA------AGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------AAAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .......::...xx.x.:..............:....x.:------....xx::..x.:..x.x::..::x..:.....:...:::.:..:..::..x..------:...x.x...:...:.:. 40M6I54M6I18M 74/112 66.1% 124/94230402 0.0% 12/112 10.7% 57443459 NA +3689 chr4 + 190214555 108591840 108591839 108592006 167 AAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGA-------------AGGAAGGAAGGAAGAGAAAAGCAAGCA chr4 + 94230402 49044653 49044652 49044823 49044653 49044652 49044823 171 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTG---------GTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCA .....xx..::.::.....:x:.....xx...::x.---------.xx.......x..:x.:x..:.::x.xx...x:......::.::.:xx..::..::.......:x:..:..x.:...:..:...:...x....x.-------------......:::.:..:x..:x.::..... 36M9D95M13I27M 97/158 61.4% 171/94230402 0.0% 22/158 13.9% 59547187 NA +3541 chr4 + 190214555 108591842 108591841 108591978 137 AGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ...:.:.::...xx.x...........::........x.:.::xxx....xx:...x.:..x.x:..::.x:...:.:...:..:...--..:..::..x..x.---x...:x.x:........:..x:x.xx:..:... 88M2D14M3I33M 85/135 63.0% 138/94230402 0.0% 5/135 3.7% 57443463 NA +3490 chr4 + 190214555 108591848 108591847 108591982 135 AGAAAGAAAGAG--AGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAG---GAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::..--.x.......::..:.........x....:xxx....xx::..x.:..x.x:..::.x:...:.:...:..:...--..:..::..x..x.xxxx:...---.........:..x:x.xx:..:... 12M2I74M2D22M3I25M 87/133 65.4% 138/94230402 0.0% 7/133 5.3% 57443469 NA +3596 chr4 + 190214555 108591860 108591859 108592017 158 AGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA---------AGGAAGA-GAAAAGCAAGCAAGCAAGCACAA chr4 + 94230402 49044660 49044659 49044826 49044660 49044659 49044826 167 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAA-TAAGCATAA .:.....:...:.x.::.::xx..:.:x:.xx.....:.x..:x.:x..:.::x.xx...x:......::.::.:xx..::..::......::x:..::.x.:...:..:...:...x....x.:::.---------.......-.:...:::.....-:.....:.. 128M9I7M1I13M1D9M 94/157 59.9% 167/94230402 0.0% 11/157 7.0% 59547200 NA +3028 chr4 + 190214555 108591871 108591870 108591929 59 GAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241528 75241527 75241586 75241528 75241527 75241586 59 GACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ..x.........:..:............:.x..:.xx.:......x..:.x.x..:.:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 33350343 NA +3532 chr4 + 190214555 108591888 108591887 108591990 103 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 10269792 10269791 10269893 10269792 10269791 10269893 102 AAACAGAAAAACAGTGAAAGAAGAAGAGAA-TAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .:.x.......x.:x.......::.:....-x.......x...:::xx..::....x.x...:..x.......:..:x:xx..:.:..::...x:..x..... 30M1D72M 68/102 66.7% 102/94230402 0.0% 1/102 1.0% 98322096 91892459 +3034 chr4 + 190214555 108591933 108591932 108591993 61 AAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 26216011 26216010 26216071 26216011 26216010 26216071 61 AATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG ..x.:x...................x::...:..:.::...:.:.x::...:..:..:.:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 82375922 NA +3156 chr4 + 190214555 108592435 108592434 108592492 58 GAGGAAAGTTTTTTGTTTTTTGGGTTTTTTTTTTTTTTTTTTTTGAGA---TGGAGTCTTG chr4 + 94230402 22012961 22012960 22013021 22012961 22012960 22013021 61 GGAGAAAGTTCTTTGTTTTTTGTTTTATTTTTTTTTCTCTTCTTGAGAAACTGAAACCTTG .::.......:...........xx..x.........:.:..:......---..:.::.... 48M3I10M 46/58 79.3% 61/94230402 0.0% 3/58 5.2% 86579474 NA +3040 chr4 + 190214555 108597255 108597254 108597294 40 TCTTGTTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT chr4 + 94230402 79940285 79940284 79940324 79940285 79940284 79940324 40 TTTGGTTTTTTTTGTTGTTGTTGTTATTTGTTTGTTTTTT .:.x.........x...........:.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 28656970 NA +3043 chr4 + 190214555 108600872 108600871 108600921 50 TGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522813 23522764 23522763 23522813 50 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTT ..x.x..::..........................x::....::.x.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 85078108 NA +3012 chr4 + 190214555 108608446 108608445 108608481 36 TCTAAAACAAAAAACAAACAAACAACAACAAAAAAA chr4 + 94230402 79648965 79648964 79649000 79648965 79648964 79649000 36 TCCAAAACAAAAAACAAACAAACAACAACAACAAAA ..:............................x.... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 28959481 NA +3611 chr4 + 190214555 108652899 108652898 108652999 101 CGTGGTGGTACACGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCTTGTACCCGGGAGGTGAAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::.....:....--......:...........x:........x.xx.x...x::....x....:.:..x.xx:..:..:..------:.x...:..... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 32619702 NA +3436 chr4 + 190214555 108661078 108661077 108661160 83 CGTGGTAGTGCACGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCACGAGAATTGCATGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:.......--....:.:.......:...::........x.x:.x...x::.x.........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 32627881 NA +3638 chr4 + 190214555 108666572 108666571 108666653 82 GTGGTGGCGGTCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 32633371 NA +3582 chr4 + 190214555 108666876 108666875 108666947 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 32633670 NA +3036 chr4 + 190214555 108675679 108675678 108675718 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 104266597 85947958 +3479 chr4 + 190214555 108685506 108685505 108685627 122 ACTAAGGCCATTTCATAGATGAGAAAACTGAGGTTCAGAGAGATTAAGTCACTTGCCAAAGATTGCACAGGTCCTAGGTGGCAAGCCTGCAGTAGAGATCCATAGCCTCTGCTCCTAACCAC chr4 + 94230402 82283119 82283118 82283233 82283119 82283118 82283233 115 ATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG-GACAATTC------AGAAGTCCCCAGTCTCCTGCTCTAACTGC .:..x:::.........x...:.:......:.::x...:x.........x...x:..x...:.::.....x.xx.::.-.:...x:.------...::...x:..:...:xx::.....::. 78M1D8M6D29M 74/115 64.3% 115/94230402 0.0% 7/115 6.1% 26402387 NA +3421 chr4 + 190214555 108685517 108685516 108685602 86 TTCATAGATGAGAAAACTGAGGTTCAGAGAGATTAAGTCACTTGCCAAAGATTGCACAGGTCCTAGGTGGCAAGCCTGCAGTAGAG chr4 + 94230402 33545654 33545653 33545728 33545654 33545653 33545728 75 TTTACAGAGGAGGAAATGGGGGCACAGAGAGGTGATATCACTTGCCTCAGACTGCACAGG-----------AAGTCTGCAGTGGGG ..:.:...x...:...:x.:..:x.......:.x.x:.........xx...:........-----------...:.......:.:. 60M11D15M 56/75 74.7% 75/94230402 0.0% 11/75 14.7% 75139863 NA +4239 chr4 + 190214555 108691608 108691607 108691708 101 TATATATATGTGTGTGTGTGTGTGTATATACATATGTATATATATACATATACACATATGTGTGTGTA--------TATATGTATATATGTATGTATATACACACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....:..:.....x.x....x.:....x..:..:.::x:.:......x::.::..x...::..:....--------.x.:.......:......x....:..::..... 68M8I33M 71/101 70.3% 109/94230402 0.0% 8/101 7.9% 87582414 NA +3043 chr4 + 190214555 108691645 108691644 108691711 67 ATATATATACATATACACATATGTGTGTGTATATATGTATATATGTATGTATATACACACACACATA chr4 + 94230402 22600202 22600201 22600268 22600202 22600201 22600268 67 ACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:....x:....::.x...:...::.:::x.x..........x...:...:....::..::...:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 86091443 NA +3223 chr4 + 190214555 108691658 108691657 108691733 76 TACACATATGTGTGTGTATATATGTATATATGTATGTATATACACACACACATATATATGTGTATATATATAAAAT chr4 + 94230402 58675386 58675385 58675460 58675386 58675385 58675460 75 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA-GCCTATACTTAAAAT .......x.x...:..:......:..:.:x::.....::.:......x..x......x.:-.:x....:x...... 60M1D15M 54/75 72.0% 75/94230402 0.0% 1/75 1.3% 50016272 NA +3271 chr4 + 190214555 108691665 108691664 108691750 86 ATGTGTGTGTATATATGTATATATGTATGTATATACACACACACATATATATGTGTATATATATAAAATATATACACATATATATG chr4 + 94230402 23247722 23247721 23247807 23247722 23247721 23247807 86 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ........:.::.:.:::..x....x.::...:........:...:.:.:.::x.x.x.x.x:.x.x..:x...x.:......... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 85443943 NA +3253 chr4 + 190214555 108691722 108691721 108691943 222 TATATATAAAATATATACACATATATATGTGTATATAAAATATATATATACACACATCTAGATGTGTGTA-TAAAATATATACACACATCTATATATATACACATATATATATACACATATATATA-------AAATATATATACACATATATATAAAATATATATACACACATATATGTGTGTATATAAAATATATATACACACATATATGTGTGTATATAAAATATAT chr4 + 94230402 23214011 23214010 23214226 23214011 23214010 23214226 216 TGTATATGGAGTATAGAAGTAAA-------GTATATAATACAAATACA-ATGCTCATCAGAATTTGTATACTCCACTTTACA-ACACCTCT-TGTGCTTACAAGTGCAAGTCTTGGAAATTAAATATGTTTTTAAATGTATATAGATATATATTCAAGATATACTTAGACATATTTAGATGCATAATTTTAGTATATATTAATTTGCATGTCTGTGTAT----AATATAT .:.....::.:....x.x::.x.-------........x.:.x...:.-.::.x....x::..x...:..-.xx.x.x..:.-....x...-.:.::x....x:.::.x:.x.xx:x.xx..x...-------....:......x.:......x:..:.....:x..x...:..x..x:..::..xx.xx.:.......xx.:x:::..:.x.......----....... 23M7D18M1D21M1I11M1D8M1D34M7I86M4D7M 134/208 64.4% 216/94230402 0.0% 22/208 10.6% 85477711 NA +3363 chr4 + 190214555 108691972 108691971 108692055 84 TATATATACACACATATATGTGTATAAAATATATATACACACATATATATGTGTATATATAAAATATATATACATATATATCAT chr4 + 94230402 68291874 68291873 68291957 68291874 68291873 68291957 84 TAGACACACACACACACCTATATATAATACATGAATACAAACTCAGTTACATGTCTATATATAATTTATATGTGGGTATATCAT ..x.:.:.......:.:x.:.:.....x.:..:x.....x..x:.xx..::...x......x...x.....:::x:........ 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 40400098 NA +3202 chr4 + 190214555 108697911 108697910 108697982 72 GTGCCTGTAATCCCAGCCACTTGGGAGGCTGAGACAGAAGAATCACTTGAACCTGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.....:.....::........x.xx:x...x..........::....x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 32664705 NA +3203 chr4 + 190214555 108701288 108701287 108701347 60 CAAGTCCATCACCTACCTCCTCTCCCTTCTTCTCTTCCTCCTTTTTCTTTTTTTCTTTTT chr4 + 94230402 56907955 56907954 56908010 56907955 56907954 56908010 56 CAAGTCCACCCTTT----CCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ........:.x::.----....::..x........::...:.....:............. 14M4D42M 45/56 80.4% 56/94230402 0.0% 4/56 7.1% 51793333 NA +3104 chr4 + 190214555 108718881 108718880 108718947 67 TGTAAGTCCAGCTACTCAAGAGGCTGAGGCTGGAGAATCACCTGAAACCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x..........::.:........x.:x.x...x...:....x....:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 32685670 NA +3048 chr4 + 190214555 108719674 108719673 108719742 69 TTGTTGCGGCAGCCTGAGCTGACTAACACAGTATATAAACTCTACAAGCACCATTCGGGTAAATGGAAG chr4 + 94230402 55422995 55422994 55423063 55422995 55422994 55423063 69 TTGTTTTGATTACTTAAGCTGACAAATACAGCATATAAATTTTACCAACATCTTACAGGAAAAGGGGAG .....x:.::x:.:.:.......x..:....:.......:.:...x.:..:.x.x.:..x...x..:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 53296679 NA +3454 chr4 + 190214555 108740923 108740922 108741005 83 CATGGTAGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCCCTTGAACCTGGGAGGCACGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:....::.--....:.:...........::........x.xx.x..:x.x........::.:..x:x:...:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 32707726 NA +3216 chr4 + 190214555 108747118 108747117 108747281 164 TTAACATTATATATATATATATATATATATAATATATATATATATATTATATATATATATATAATATATATATATATTATATATATATATAATATATATATATATATTATAT-ATATATATATAATATATATATATATTATATATATATATGTCAGTATTTCATA chr4 + 94230402 42521907 42521906 42522071 42521907 42521906 42522071 165 TTGACATTATATATACAAAAATATAGTTTGAATATGTAAATCAAAATTATAAACATAGGCTGAAATTATATAAAAATTGGAAATTTATATAATGAAATTGAAAATGTGGTGCAAAAAAAATTAAATATTTATGTGAACAGGATATGTTTTCATTCCTATTCTATA ..:............:.x.x.....xx.xx.....:..x..xx.x......x.:...x::xx..xx......x.x...:x.x..x........:x.xx.:x.x..:.x:.::-.x.x.x..xx.....x...:.:x.:x:x....:.x.x::.:xx....::... 112M1I52M 101/164 61.6% 165/94230402 0.0% 1/164 0.6% 66225211 NA +3011 chr4 + 190214555 108747154 108747153 108747202 49 TATATATATATTATATATATATATATAATATATATATATATTATATATA chr4 + 94230402 78811865 78811864 78811913 78811865 78811864 78811913 49 TGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA .:.......x.:x...:.........:...x..........:x...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 29935289 NA +3273 chr4 + 190214555 108747182 108747181 108747230 49 TATATATATATATTATATATATATATAATATATATATATATATTATATA chr4 + 94230402 78811865 78811864 78811913 78811865 78811864 78811913 49 TGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA .:.......x.x....:.........:...x..........x....... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 29935317 NA +3011 chr4 + 190214555 108747214 108747213 108747262 49 TATATATATATTATATATATATATATAATATATATATATATTATATATA chr4 + 94230402 78811865 78811864 78811913 78811865 78811864 78811913 49 TGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA .:.......x.:x...:.........:...x..........:x...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 29935349 NA +3307 chr4 + 190214555 108753730 108753729 108753836 107 AGACTCCGTCTCAAATAAATAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAAAGAAAAAAAGAAAT chr4 + 94230402 52659750 52659749 52659856 52659750 52659749 52659856 107 AGATTTCATACCAAGTTAGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAAATATAT ...:.:.:.x:...:.x.:x.........xxx.:....:::...x:::xx.x:x:..xx...............:....:..x....:::x..x:..x....x.x.. 107M 67/107 62.6% 107/94230402 0.0% 0/107 0.0% 56093980 NA +3026 chr4 + 190214555 108753751 108753750 108753831 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAAAGAAAAAAA chr4 + 94230402 41112178 41112177 41112258 41112178 41112177 41112258 81 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........:.:x:x...:..x...:..::.x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 67641573 NA +4019 chr4 + 190214555 108766987 108766986 108767060 74 GTGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:............:........x.xx:x...x::...........:..x.xx:..:..:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 32733783 NA +3357 chr4 + 190214555 108785998 108785997 108786064 67 TGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGCAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.........::.:........x.xx.x...x...........:.x..x.xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 32752787 NA +3169 chr4 + 190214555 108795509 108795508 108795575 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAAACCAAGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.x..x...x::......x...::..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 32762298 NA +3020 chr4 + 190214555 108800885 108800884 108800930 46 TCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 + 94230402 87791852 87791851 87791897 87791852 87791851 87791897 46 TCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGAC ...:::..:...:.:.............::.....:.....:.... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 21009033 NA +3465 chr4 + 190214555 108805683 108805682 108805765 83 CATGGTGGCACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCAGGGAGTCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--....:.:...........::........x.xx.x...x..........x:.:..::xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 32772486 NA +3787 chr4 + 190214555 108808434 108808433 108808492 59 GCACGTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAAACGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...........:.........::::........x.xx.x...:.:...........:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 32775228 NA +4058 chr4 + 190214555 108826398 108826397 108826498 101 CATGGTGGCACACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....::...:.--...:.:...........::........x.xx.x...x.............:..x.xx:..:..:..------..x..x...... 15M2D66M6D12M 70/93 75.3% 93/94230402 0.0% 8/93 8.6% 32793201 NA +3576 chr4 + 190214555 108836939 108836938 108837021 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCACGAGAATTGCTTGAACCTGGGAGATGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x.x:.x...x::........::.:..x.xx:..:...:. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 32803742 NA +3593 chr4 + 190214555 108840102 108840101 108840184 83 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--....:.:...........::........x.xx:x...x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 32806905 NA +3637 chr4 + 190214555 108859204 108859203 108859281 78 TACCATCCTCATTCTGTAGATGGGAAAACTGAGGCACAGAGAAGTGAAATAACTTGCCCTAGGTCACACATTTAGTAA chr4 + 94230402 82283118 82283117 82283195 82283118 82283117 82283195 78 TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGA ..::..xx.....:::..x.....:......:.:.....:x.::.x..:.:...x:..:x..........x.....:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 26576086 NA +4720 chr4 + 190214555 108868491 108868490 108868705 215 GGAAGGAAGGAGGGAGGGAGGGAGAGAGAGAGGAAGAAAAGAAAGAAAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGGGAAGGAAGGGAAGGGAAAGAAGGAAAGGAAGGGGAAGGAAAGGGAAGGGAAGCGAAGGGAAGGAAGAA chr4 + 94230402 59372550 59372549 59372754 59372550 59372549 59372754 205 GGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCG--AGGGGGGAAGAAAAAAATAATAA-----AAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTA---AATTTAATAAGAGGAAAAA ..:..:...x.:x.x.:.:..:..x:.x..::::::....x.xx.....x..x...x..x:....:..:..x:.x..x:.x.:x...:::.:x.--...::........:...x..x..-----..:.:..:.x..x.:x:...:..x...x..x::....:...x..x:.x......:::x.:x......x.---..x:x..x:::.....:.. 94M2D23M5D69M3D19M 125/205 61.0% 205/94230402 0.0% 10/205 4.9% 49495941 NA +3164 chr4 + 190214555 108868505 108868504 108868609 105 AGGGAGGGAGAGAGAGAGGAAGAAAAGAAAGAAAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAAA chr4 + 94230402 65363854 65363853 65363958 65363854 65363853 65363958 105 AAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAGCCAACAGAACAGAA .:..x.::.....::..x:xx:..:.:...x..:.......::...x.x......:..xx..:::.....x::...:.x.:x......x.:xx..x.:.:x.:.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 43504651 NA +3075 chr4 + 190214555 108868509 108868508 108868613 105 AGGGAGAGAGAGAGGAAGAAAAGAAAGAAAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAAAGAAA chr4 + 94230402 65363854 65363853 65363958 65363854 65363853 65363958 105 AAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAGCCAACAGAACAGAA .:..x..:.....:.:.x.xx.:.:.:...x..:::...:.:....x.x......::.xx...::.....x::..::.x.:x......x.:xx..x.:..x::.. 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 43504655 NA +3600 chr4 + 190214555 108868602 108868601 108868826 225 AAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGGGAA-------------GGAAGGGAAGGGAAAGAAGGAAAG-------GAAGGGGAAGGAAAGGGAAGGGAAGCGAAGGGAAGGAAGAAAGGAAGGAGGGAAGGAAGAAAG------------GAAGGGAGGAAGGAAGGAAGGAGGAAGAAAGTAAAAGGAAGGGAAGGGAAGGAAGAAAGGAAGGAAAGGAAGGA---------AGGAAAGAAGGAAGGAAAGGAAGGA chr4 + 94230402 66308505 66308504 66308770 66308505 66308504 66308770 266 AAGACAAGCAAAGGAGCACAGAATGAGGGGACAAAGACACACAATTTGAGCTGGAACAGTAGCGACAACAGCTTGATTTCTCAGTAGTAGAGGGAGAGTGCAGGAAAGTAGAAGCATGCCAGTAAAGATGTAGGAAAAGATCTTTGCATCGCCTTCTTGAAGGGGGTGAGAAATGTAGGAGGAAAAAAGCAAGGGGAGGAGAAAATTATGAAGTGGGAGGAAATAGGAAAAACTGGGTTTTAAAAGGTAAGGAGGAAATGGTAGGA ....x..:x....:.:x.x....x..:....x..:.:x.-------------....x:.x..x..x.:x..xxx::-------.x..x:..:...:..x.x...:...:::.:.x.x.xx..x..:..x.x...:..:..xxxxx.------------......:.x:..:..x.x........:....:..::...:.:...::xx.x....x::.:::::.x.....::.---------.::.::x.....:.:..x..x.... 39M13I24M7I63M12I74M9I25M 136/225 60.4% 266/94230402 0.0% 41/225 18.2% 42560097 NA +3364 chr4 + 190214555 108868701 108868700 108868863 163 AAGAAAGGAAGGAGGGAAGGA--AGAAAGGAAGGGAGGA-AGGAAGGAAGGAGGAAGAAAGTAAAAGGAAGGGAAGGGAAGGAAGAAAGGAAGGAAAGGAAGGAAGGAAAGAAGGAAGGAAAGGAAGGAAGGAATGAAGGAAGGAAGATAGGAAGGAAAGAAGGAA chr4 + 94230402 49044652 49044651 49044808 49044652 49044651 49044808 157 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAG------AAGAAAGGTGAAAA---ATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ..:.:.xx..:...::...:.--...:.xx.:...x..x-..:...:x.:.x:.x:::...:.xx.:.x::.:........::xx....:...------...:....x:.:..---.x.....:..:...:........x.:::..xxx..:xx:.:....:.... 21M2I16M1I53M6D14M3D50M 96/154 62.3% 157/94230402 0.0% 12/154 7.8% 59824049 NA +3272 chr4 + 190214555 108868724 108868723 108868869 146 AAAGGAAGGGAGGAAGGAAGGAAGGAGGA--AGAAAGTAAAAGGAAGGGAAGGG--AAGGAAGAAAGGAAGGAAAGGAAGGAAGGAAAGAAGGAAGGAAAGGAAGGAAGGAATGAAGGAAGGAAGATAGGAAGGAAAGAAGGAAGGAAGA chr4 + 94230402 49044661 49044660 49044810 49044661 49044660 49044810 150 AAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA ..::...::..:x...::.xx.:..:x.:--......xx..:x::x.:....x:--...x:.......:.:..:xx:...:...:.:.:.:.x:.::..x.:...:..:...x...x....x.::.x.xx:..:xx..:.:..:....:. 29M2I23M2I94M 85/146 58.2% 150/94230402 0.0% 4/146 2.7% 59824063 NA +3532 chr4 + 190214555 108868927 108868926 108869062 136 AGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAAGAAAGGAAAGGAAGAAAGACAATAAAAGAAAGAGAAAGGAAAGAAAAGGAAAGGAAAGAAGGAAGGAAGAAAAGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 69368676 69368675 69368810 69368676 69368675 69368810 135 AAAAGAAAGGGAAAGGTGACACGGCAGGGTTATAGATTAAAGGCTTGTAAAGCTGGATGA-ATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAA .:...:....:..:::x..x.x.:x..::xx.x.:.xx....:xxx.x..:.xx.:.x..-.xx..:.:.........:..:..:.....::::...x.:x...:........::..x..x.x.:::.x....... 60M1D75M 82/135 60.7% 135/94230402 0.0% 1/135 0.7% 39500251 NA +3090 chr4 + 190214555 108869011 108869010 108869071 61 AAAAGGAAAGGAAAGAAGGAAGGAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG .........::...:::..::....x:.:.......:...:...x....:::x::...... 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 46393297 NA +3559 chr4 + 190214555 108872286 108872285 108872345 60 TGCACCTGTAACTCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCACTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....::............::........x.xx.x...x..........::.:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 32839081 NA +3359 chr4 + 190214555 108872657 108872656 108872747 91 TCTATTAAGTCAGGCATTAGATTT---GATATATATATACACACACACACACACATATACATATATACACACACACATACATATACATATATAC chr4 + 94230402 42936184 42936183 42936277 42936184 42936183 42936277 94 TCTGTCTGGCCAAACACTTTATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGCTGAAATAC ...:.:x:.:..::..:.xx....---...::..:....:...:..x:...:......:..x:.:.:......x.:.::.....:.xx.x.... 24M3I67M 60/91 65.9% 94/94230402 0.0% 3/91 3.3% 65936473 NA +3039 chr4 + 190214555 108877590 108877589 108877679 90 TAAAAAATTCAAATAGTCTACTGAGATAGCAGCTTAAATACTGTCTTCTGGCCAAAAAACAAAAAACTAACAAATAAAAAAAAAAACAAC chr4 + 94230402 22392404 22392403 22392490 22392404 22392403 22392490 87 TGAGGAGTACAATCAGTGTAC---GGCCGTTGGTCACAGACTGGCTTCTATTTAAAAAAAACAAAACAAACAAACAAAAAAAAAAACCAC .:.::.:.x...x:...x...---.::x.:x.x.:.x.x....x.....:x::......x.x.....x......:............x.. 21M3D66M 60/87 69.0% 87/94230402 0.0% 3/87 3.4% 86485186 NA +3396 chr4 + 190214555 108929688 108929687 108929765 78 ATGGTGGTGCATGCCTTAGTCCTAGCAACTTGGGAGGCTGAGGCAGGAGGATTCCTTGAACCCAGGAGTTTGAGGCTG chr4 + 94230402 76033198 76033197 76033274 76033198 76033197 76033274 77 ACAGTGGTGCACGT-GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .::........:.:-x....:.:...x.....::........x.xx.x.:.x:x...........:..:..x:..... 14M1D63M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 32896490 NA +3185 chr4 + 190214555 108938717 108938716 108938799 83 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGACAGGAGAATGGTGTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x......:.........:::.........x.xx.x...xx::x.......:.:..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 32905520 NA +3873 chr4 + 190214555 108940546 108940545 108940708 163 CCTGGCATTCCACGGGGGCCATCTTTCCCTGTGTCCCCAGGTGGCCCTCTTGGGCCTGGAGGGCCAGGGGGTCCTGGAGGCCCTGCCTGTCCTTGGTCACCCTGTGATGGAGAAGGGAACAGACCAGCAATAACCATGAAAGAT--AAAGACCCAGGTCTTCTTT chr4 + 94230402 14029030 14029029 14029175 14029030 14029029 14029175 146 CCTGGAAATCCAGGTATTCCATCCCGGCCAGGTGGTCCGGGTGAACCCTGAGGGCCTGGGAGGCCAGGGGGTCCTGGATATCCTGGGGTTCCTTGGTCACC------TGGAG---------GACCAGGAA----CATCGAAGCCTGGAGGACCTGGATCCCCTTT .....x.x....x.x:xx.....::xx..x.xxxx:..:....:x..::xx........::.................x::....xxxx............------.....---------......x..----...x:...x:--:.:....::.:..::.... 101M6D5M9D9M4D10M2I19M 99/144 68.8% 146/94230402 0.0% 21/144 14.6% 94911516 NA +3098 chr4 + 190214555 108947302 108947301 108947384 83 CATGGTGGCGGGTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x::.--....:.::..........::........x.xx.x...x..:.......::.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 32914105 NA +3204 chr4 + 190214555 108966844 108966843 108966935 92 CTGTCTTAAAAGAAAAGAAAGAAAAGAAAAGAAAAAAAGAAAAGGAAGGAAGGGAAGGGAAGGGAAAAAGGAAAGAGAGAAAAAGAGAGAAA chr4 + 94230402 66803502 66803501 66803593 66803502 66803501 66803593 92 CTAATTTAAAAATATTGCAGATAAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAA ..:x:......:x.xx.x.::x....x.:.....:...:....:....:.::::....:::..x.:x.:.x..:.......x.:..x.x... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 42163342 NA +3157 chr4 + 190214555 108990162 108990161 108990274 113 AGATCACACCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATC chr4 + 94230402 85548379 85548378 85548474 85548379 85548378 85548474 96 AAACCAGACCATTG---TCACATCTGGACAAT-----CAAAAGCTCTTC---------AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATC .:.:..x.......---..xx::....:...:-----.....x::.x..---------.............:.:xx.x..:...:.:.:.::...:..........x...... 14M3D15M5D12M9D55M 70/96 72.9% 96/94230402 0.0% 17/96 17.7% 23441783 NA +3092 chr4 + 190214555 108990201 108990200 108990279 79 AAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATCTCAAA chr4 + 94230402 79081258 79081257 79081336 79081258 79081257 79081336 79 AAATTGCATGTGGAGGAAAAAAAAAAAAAAAAGGAGAAAATATGGAGACAGATGGATTTATATAAATTCAGATTGTAAA ...:.x...x.x:.::................::.:.......:x.x.:.x..:x..x......x..x:.x..:x:... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 29908943 NA +3290 chr4 + 190214555 108990212 108990211 108990358 147 CAAAAAAAAAAAAAAAA---AAAAAAAAAAAATATATATATATATATATATATATATATATATATCTCAAAAGA------ATCGATAAAAATATATATGTGAAATTATATCTACAGAAATAATATACATCACAAAAT--TTAAAAGTAAAATTTTTAA chr4 + 94230402 6934148 6934147 6934303 6934148 6934147 6934303 156 CAAAAACAACAAAAAGATTAAAAAAAAAAAAGTATGTATGGTTATACAAATGTATTAAAATATGTCACAAAATATATTCTCTGCACAAAAATA-AGATTTTTTTTTGT-TCTCAAGAAATAATATTCAGTAACATATGGCTAGGAGTGAAATATTGAA ......x..x.....:.---...........:...:...:xx....:.x..:...xx.x....:..x.....x.------x.xx.:.......-.x..x.xxxx..:.-...xx...........x..x:.xx.x..--:..::...:....x..x.. 17M3I54M6I13M1D14M1D28M2I19M 103/145 71.0% 156/94230402 0.0% 13/145 9.0% 102056064 88158491 +3121 chr4 + 190214555 108990215 108990214 108990268 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 18960139 NA +3282 chr4 + 190214555 108990215 108990214 108990270 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 107495215 82719340 +3324 chr4 + 190214555 108990217 108990216 108990308 92 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATCTCAAAAGAATCGATAAAAATATATATGTGAAATT chr4 + 94230402 51472490 51472489 51472581 51472490 51472489 51472581 92 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAAATT ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:..x.x.::.:..x:..x.:..:.x:.x.x:::..... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 57517727 NA +3253 chr4 + 190214555 108990219 108990218 108990271 53 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:....x..........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 107495219 82719336 +3243 chr4 + 190214555 108990230 108990229 108990289 60 AAAAAAAAAAATATATATATATATATATATATATATATATATATCTCAA-AAGAATCGATA chr4 + 94230402 58988593 58988592 58988653 58988593 58988592 58988653 61 AAAAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATA ......:...x............:.:.:..:......x.:..:......-...x..:x... 49M1I11M 48/60 80.0% 61/94230402 0.0% 1/60 1.7% 50001637 NA +3170 chr4 + 190214555 108996262 108996261 108996314 53 ATGGAGGAAGATCTACCAAGCAAATGGGAAAAAAAAAAAAAAAAAAAAAGGAG chr4 + 94230402 92134794 92134793 92134846 92134794 92134793 92134846 53 ATGGGGAAAGATCTGCCGAGAAGGGAGAGAAAAAAAAAAAGAAAAAAAAAGAG ....:.:.......:..:..x.::x:.::...........:........:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 16861468 NA +3309 chr4 + 190214555 109000718 109000717 109000777 60 CCTGGGCAACAGAGTGAGACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACT chr4 + 94230402 44082651 44082650 44082710 44082651 44082650 44082710 60 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAACT ..x.x...:x..:...:.x:..............x...x...x....x...:........ 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 64918067 NA +3173 chr4 + 190214555 109006385 109006384 109006469 85 TTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTTTTAGGAGAGACAGGGTTTTACCATT-TTGGCCAGGCTGGTCTCAAACACCTGA chr4 + 94230402 62029570 62029569 62029652 62029570 62029569 62029652 83 TTTTTTGCCTTTTTTTTTTTTTTTTTGGACTGCTTTAGGATGACAGGGTTTTTCCTTTCTTGAACAGGGAAG---CAAACACCCAA ......x::...................xx.x:..x:.::x...........x..x..-...:x....xx:.---........::. 58M1I13M3D11M 61/82 74.4% 83/94230402 0.0% 4/82 4.9% 46976815 NA +3080 chr4 + 190214555 109019325 109019324 109019384 60 TATACATGTGTGTATACACACACATACACACACACACACACACACACACACATATATATA chr4 + 94230402 58675386 58675385 58675445 58675386 58675385 58675445 60 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ..:....x.x.....:..:.:.:......x..:.::::.........x..x......x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 50343939 NA +3718 chr4 + 190214555 109019329 109019328 109019397 69 CATGTGTGTATACACACACAT------ACACACACACACACACACACACACACA-----------TATATATATATATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ...........:.........------...:.:::.......:...........-----------..:..:x...x.......... 21M6I27M11I21M 59/69 85.5% 86/94230402 0.0% 17/69 24.6% 85771608 NA +3503 chr4 + 190214555 109019342 109019341 109019405 64 ACACACATACACACACACACACACACACACACACATATATATATATATATATATATATTTATAT chr4 + 94230402 74526066 74526065 74526129 74526066 74526065 74526129 64 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ....xx.x.:x..............::x...:...:.x.......::.......:......x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 34493276 NA +3866 chr4 + 190214555 109028586 109028585 109028668 83 CATGGTGGCATGCACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x..:...:...........::........x.xx.x...x:............:..x:xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 32995389 NA +3263 chr4 + 190214555 109092344 109092343 109092424 81 GGTGGTGCGCAGT----CTCAGGTAGTCCCAGCTACCTGGGAGGCTGAGGTGAGAGGATTGCTTGAGCCCAGGAGTCTGAGGCTG chr4 + 94230402 76033190 76033189 76033274 76033190 76033189 76033274 85 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .:..:.:.:....----.x.:x.....:........:..::........x:xx.x.:.x::.....:.....:..::.x:..... 13M4I68M 55/81 67.9% 85/94230402 0.0% 4/81 4.9% 33059154 NA +3201 chr4 + 190214555 109093506 109093505 109093576 71 GTGCCTCTGTAGTCCCAGCTACCTGGGAGGCTGAGGTGAGAGGATTGCCTGAGCCCAGGAGTCTGAGGCTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ....x:x......:........:..::........x:xx.x.:.x::.:...:.....:..::.x:..... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 33060302 NA +3148 chr4 + 190214555 109138643 109138642 109138715 73 CATCTGTTGTTTCCTGACTTTTTTGGTTGTTGTTGTTTTTTGTTTTTGTTTTTGTTTTTTGTTTTTTGTTTTT chr4 + 94230402 34618620 34618619 34618688 34618620 34618619 34618688 69 CATGTGTTGGCTTCTA----TTCTGGTTGCTTTTGGTTTTTTTGTTTTTGTTTGCTTTCTGTTTGTTGTTTTT ...x.....x:.:..:----..:......:.x...x.....x.x...x.x....:...:.....x........ 16M4D53M 53/69 76.8% 69/94230402 0.0% 4/69 5.8% 74520023 NA +3141 chr4 + 190214555 109138649 109138648 109138725 77 TTGTTTCCTGACTTTTTTGGTTGTTGTTGTTTTTTGTTTTTGTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTT chr4 + 94230402 19095206 19095205 19095282 19095206 19095205 19095282 77 TTATTTATTTTATTTTCTGGTTAATATAGTTTTTTGGTTTTTTGTTTGTTTTTTGTCTTTTCACTATTATTATTATT ..:...x:.xxx....:.....:x.:.x........x....x.x............:....xx:.x..:..x..x.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 90043443 NA +3033 chr4 + 190214555 109149917 109149916 109149986 70 TTTGGAAATAATTTTATGTGTATGTATGTGTGTGTGTGTGTGTACCTGTGTGTATGTATGTGTATGTATG chr4 + 94230402 5214247 5214246 5214316 5214247 5214246 5214316 70 TCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .:..x.x.:.xx.:..:.......:..x..::........:.:.xx:......:..:...::x....:.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 103935670 86278885 +3213 chr4 + 190214555 109149934 109149933 109150031 98 GTGTATGTATGTGTGTGTGTGTGTGTACCTGTGTGTATGTATGTGTATGTATGTGTGTATGTGTGGGTGTGTGTGTGTGTATGTATCTGTGTGTATGT chr4 + 94230402 5214232 5214231 5214321 5214232 5214231 5214321 90 GTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCA--------AACGTGTGTGTGCATGCAGATGTGTGCACAT ....:..::::x....x..:::::::.:..::.......:..x..:....:....:.:.--------x::.........:...:.xx......:.::. 59M8D31M 57/90 63.3% 90/94230402 0.0% 8/90 8.9% 103935702 86278853 +3269 chr4 + 190214555 109164413 109164412 109164478 66 TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGACCTAATCAAGAAATACATGTGTTTGTTTGTTGGTT chr4 + 94230402 55124416 55124415 55124481 55124416 55124415 55124481 66 TGTGTTTTTGTTAATTTTTTTGTTTGTTTGTTTTTAATAATAAATACATGCTTTTGTTTATTTGTT ...x.x......x:...x............x::.x.x:..x.........:x.......:..x... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 54039997 NA +3080 chr4 + 190214555 109189418 109189417 109189487 70 TGCACCTGTAATCCCAGCTACTCGGTAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG---------GCAGAGCATG chr4 + 94230402 76033205 76033204 76033283 76033205 76033204 76033283 79 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATG .....x....:.:.........:.:x........x.xx.x...xx:.x.........:..---------.:...:.... 60M9I10M 53/70 75.7% 79/94230402 0.0% 9/70 12.9% 33156213 NA +3150 chr4 + 190214555 109196337 109196336 109196446 110 GTTTATAGTGTATGAGAGAATAAATAT---AAAAATAT----CGTATGCATTATAACATGCATATGTGAATGTGTGTATATATGTGTATATATGTATATATAAATGTTTGTAAACAT chr4 + 94230402 23248815 23248814 23248930 23248815 23248814 23248930 116 GTGTGTAGTTTATGTGGAAATGTATGTTTAAAAAATATATAGCATCTACTTCTTAAAAAGGTAGAGCAAAAGCAGAT-TATGTATGTATATATGTTTATATAGATGTTTGTAAACAT ..x.:....x....x.::...:x..:.---........----.:.x.:.x.:x...x.x.xxx:x.::..x.::x:.-...:.:...........x......:.............. 27M3I8M4I35M1D39M 76/109 69.7% 116/94230402 0.0% 8/109 7.3% 85947522 NA +3163 chr4 + 190214555 109218346 109218345 109218411 66 GGTTTTTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTGAACTACACTTACT---CTCCATGGC chr4 + 94230402 38205484 38205483 38205552 38205484 38205483 38205552 69 GGTTTCTTGGGGTTTTTTTTGCTTTCTTTTTTTTTTTCCTTGCAAAATATATCCTCCAGGCTCAATGGC .....:..............x:...:...........x...x::..x..:.:::x.:---...x..... 57M3I9M 50/66 75.8% 69/94230402 0.0% 3/66 4.5% 71012862 NA +3249 chr4 + 190214555 109245975 109245974 109246044 70 TTTTCAGTAGAGGAACCTCTAGTTGCTTTTTTGTTAAAAAGCAAAAAAAAAAAAAAAAAAAATTTAAAAA chr4 + 94230402 10265376 10265375 10265445 10265376 10265375 10265445 70 TTTATAATTGAAGACTCTCTTGTAGCTTTCTGGTTACAAGAAAAAAAGCAAAAAAAAAAAAAATCAAAAA ...x:.:.x..:..x:....x..x.....:.x....x..::x.....:x.............x.:..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 98980599 91233956 +3081 chr4 + 190214555 109254450 109254449 109254511 62 TGTACATGTAGGCATATGTTTATATATATATATATATATATATATATATATATATATGTATG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:::::...:.:........:....:..:::.:.:......:..x.:...::..x...... 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% 22620520 NA +3143 chr4 + 190214555 109254478 109254477 109254550 73 TATATATATATATATATATATATATATATGTATGTGTGTATATACATATACATATATATCTGTTCATGTGTAA chr4 + 94230402 41749096 41749095 41749168 41749096 41749095 41749168 73 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAA ......x.:.:.:.....x:.x.....xx.......:....:..:.:......:..::::.:.x:x::..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 67505382 NA +3029 chr4 + 190214555 109260468 109260467 109260512 45 TGTTTGGGATTTGTTTGGTTGGTTGGTTTTTTGTTTGTTTTTTTT chr4 + 94230402 79896035 79896034 79896079 79896035 79896034 79896079 45 TGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTT ......xx:....x..................x...x........ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 29364433 NA +3639 chr4 + 190214555 109262374 109262373 109262443 70 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x......:.........:.::........x.xx.x...x..........::.:.. 8M2D60M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 33229177 NA +3237 chr4 + 190214555 109285843 109285842 109285886 44 TTGTTGTTTGTTGGTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT chr4 + 94230402 50433371 50433370 50433413 50433371 50433370 50433413 43 TTGTTGTT-GCTGGTTTTTGTTTTGTTTTGTTTGTTGTTTTTTT ........-.:......................x.......... 8M1D35M 41/43 95.3% 43/94230402 0.0% 1/43 2.3% 58852472 NA +3211 chr4 + 190214555 109285845 109285844 109285894 50 GTTGTTTGTTGGTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTGTCTGTTT chr4 + 94230402 12831155 12831154 12831204 12831155 12831154 12831204 50 GTTGTTTATTTGTTGTTGTTTCGTTTTGTTTGTTGTTTTTTTTTTTCTTT .......:..x...x......:.........x..........x.:.x... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 96454690 93759865 +3066 chr4 + 190214555 109308193 109308192 109308282 90 CAGAACCCAAGCCCAGTCTGCCTGCATTCATTATCCAGCTCTGCCATTTAATAGCTGTGGGACATTGGGTAAATTACTTCACTTTTCTAT chr4 + 94230402 79898234 79898233 79898323 79898234 79898233 79898323 90 CAGGACTGGGGTTTGGAATCCTTAAGTTCATTCACCAGCTCTGCCACTGACCTGCTGGCTAACTTTGGAGAAATTGCTTCATCTTTCTAT ...:..:x::.::::.xx.x.:.:x:......xx............:.x.x:x....xxx:..x....:x.....:.....::....... 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 29409959 NA +3394 chr4 + 190214555 109317512 109317511 109317570 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:...........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 33284306 NA +25064 chr4 + 190214555 109346111 109346110 109346622 512 TTTAAAAAAATAAAAATAAGAGGTCAAAAAAATTAAACAT--GTTTTACTTTTTTCCTCACAAGAACATAAAAATTACGGAGGGGAA--CTTAACAGGGAATTTTTAAAA--GGTAACA-CAATTTTTCCTTTAAGTAGTCCTTGGGTAGTTATGACAGAATAGTTTGCACTTTTTGTTTGTTTCTTTG------AACTGGGATTTTGGTCTAAA----GTTTTGTTTGTTTCTAGTATCTGCTTCTGCCTCCCCCTCTATCAGATCGGCTTCCTCCACTGCCACCACCTCTTGGTGCTCCACCGCCTGAATTGCCGTGGGAATCACGTGGAGG----------ATTTCCATAGAAGGGGGAAGCCGTCTTTCTTGTCTGCCAACCCGACCACGACCACTTGATTAGAGATCACTTCGGCTGCTTGAGTAACTGTCTCGACTTCCACCATATCCGTCACGTGAACTGCTATAATCATC---------GCTTCCACCATAAGATGGGGGGGCGGGGGCCCTCCTGTAGGTGGAGCACTACGTGAGTTAC chr4 + 94230402 4422205 4422204 4422739 4422205 4422204 4422739 535 TTGAAAGAAATGTTAACAATTCTGAAATGAAATTAAACACTGGTTTAACTTTT--CTTCACAAAAGCATAAAAGTCATGGAGGGGAAAACTTAACAGGCAACAATAAAAAAAGGTAAAAACAACTTTTCCTTTTAGTAGTCCTCTGGTAGTAAAGATAGAAC---TTCCACTTTTTTTTTTTTAATTTGTTTGAGAAGTAATGTCTTGGTCCAAAAAAAGTTAAGAGTGTTTTTAGTATCTGCTTCTGCCTCCACCTCTGTCAGATCTGCTTCCGCCACGGCCACCACCTCTGGGTGCTCCGCGGCTTGAACTACTGTATGAATCACGAGGAGGTGGATAGCCCCTTTCCATGGATGGGGGAAGACCCCTGTCTTGTCTTCCAACACGATCACGGCCACTTGAGTAGACATCACTTCTGCTGCTTGAGTAACTTTCTCGGCTT---CCATATCCATCACGTGTGCTGCCGTAATCATCATATCGACTGCTTCCACCATAAGAT-----GGCGGGGGCCCTCGTGCAGGTGGAGCACTACGTGAGTTAC ..x...:....:xx..:..xxxxxx..x:..........:--....x......--.:......:.:.......:.:.:.........--.........x..:xx.x....--.....x.-...:.........x.........:x......x.x..:....:---..x........x...x..xx....------..x.::x:.:......:...----...xx.xx.....:....................x.....:.......x......x....x............x........:.x..:....:.:.:..:x........x.....----------x.......:..x........x.x:..x........x.....x...:....:........x....x........x...............x.....:...---........:.......x:....::........---------................-----.............x..:....................... 40M2I11M2D32M2I21M2I7M1I42M3D24M6I20M4I115M10I99M3D32M9I16M5D40M 408/499 81.8% 535/94230402 0.0% 49/499 9.8% 104923906 85290649 +9560 chr4 + 190214555 109346619 109346618 109346851 233 TTACGATAACTTTCATATGAATCTCTGTAGGAATCTCCAGCTGGATGATCTGAATAGTC------ATGATCACTATTATATCCATCTCTATCGCT---------------------------------------------------------------------------------------------ATAGCCTCTTGATGGATAGTCATCACGTGAACTGAAATGACCATAATCACGGTAAGTACAATCTCGCGGTGGTGGTGGTGCATAACCTCTTGTATCACGAGAACTTGGCTAATCTCTGCTTGAAGAACTGTCTTCAAGAAGAAC chr4 + 94230402 4423231 4423230 4423559 4423231 4423230 4423559 329 TTACCATAACTCTCATACGAATCTCTGTAGGAACCTCCACTTGGATGATCTGAGTAGTCTCTGTCACGTCCACCACCGTATCCATCACGATCGCTGTAAGAGGAAAGACTACTGAGACTTAGTACAAATCAGTCAGATCACAGGAGAAGTAAAAAAAGACATAGACAAAAATCCAGTAGTAGATACCTATAGCCCCTGGAGGGGTATTCATCACGTGAACTGGAATGACCATAATCACGATACGCATAGTCACGC---GGAGGTGGTGCATAGTCCCGTGTGTCCCTGGAACTGGGGTAATCTCTGCTCGAGTAACTACAACGAACAAGAAC ....x......:.....:...............:.....x:............:.....------.:.x:...:.:::........x.x......---------------------------------------------------------------------------------------------......:..x..x..:..x...............:................:..x.:.:.:..x...---..x...........::.:.x...:..x.x:.....x..x...........:..:x....::xx:x..x...... 59M6I30M93I67M3D74M 181/230 78.7% 329/94230402 0.0% 102/230 44.3% 104923388 85291167 +4230 chr4 + 190214555 109346826 109346825 109346923 98 CTTGAAGAACTGTCTTCAAGAAGAACCCTCTACGAGAGGGCAGCGGTTCCCTTCCAGGTGGACCGCACTAACTATCTCTTCCACGTGACACAGGAGCT chr4 + 94230402 4423670 4423669 4423759 4423670 4423669 4423759 90 CTTGGAGACATGT--------AGACATCTCTTCGTGACGGCATTGGTTCTCTGCGTGGAGGACCACCGTAACTGTCTCTTCCACGTGACACAGGAGCT ....:...xx...--------...xx:....x..x..x....x:.....:..x.xx..x.....:.xx.....:........................ 13M8D77M 70/90 77.8% 90/94230402 0.0% 8/90 8.9% 104923156 85291399 +6853 chr4 + 190214555 109346922 109346921 109347058 137 CTCTTCCTCCCATTCCACTGCTGCTGCGAACTGGTCCTGAAGGTGCAGAACTCTTAGGAGGAGGACCCCCACTTCTTGGTGGTGGTCTTCTTTTTACTGGGAGTGGTCCCCTGGAAGAACTCATGTTAAAATTCATG chr4 + 94230402 4424108 4424107 4424241 4424108 4424107 4424241 134 CTCTTCCTCCCAT---GCTACTGCTACGCACTGGTCCCGAAGGTGCAGATCTTTTAGGTGGAGGGCCTCCACTTCGTGGAGGTGGACCTCTCTTCATGGGAAGAGGCCCTCGAGAAGACCCTACAAGATAAGCCATG .............---:..:.....:..x........:...........x..:.....x.....:..:.......x...x.....x.:...:..:.:x..:..x..:..:.x:.....x.::.::xx.x..x:.... 13M3D121M 100/134 74.6% 134/94230402 0.0% 3/134 2.2% 104922814 85291741 +9959 chr4 + 190214555 109347073 109347072 109347248 176 ATCCATGTGTCTTCTCCATGAGGGAGGTCTCCTGGTTCCTCCACTTCTTCCTCTTCCACCTCTAAGACCTTTTGGAGGGCCTCTACTTCTTGGAGGTGGAGGCAGTCCACGTCT---ACCACTTTCAAATGATGGTTTGGTGGCTTGTTCCACCTTGATGGCTTTTCCATCTAATGACT chr4 + 94230402 4425310 4425309 4425485 4425310 4425309 4425485 176 ACCCAAGTGACTCCCTCTTGAAGGTGGTCCTCTCG---CGCCACTTCCGCCTCTTCCACCTCTAAGGCCCCTGGGAGGACCTCTGCTTCGTGGAGGGGGTGGTGGCCCACGCCTACCACCACTTTCAAAGGATGGCTTGGTTGCTTGTTCCACTTTAATTGCTTTCCCATCTAATGACT .:...x...x..:.::.x...:..x....::..x.---.x.......:x.................:..::.x.....:.....:....x......x..x..::.:.....:..---............x.....:.....x...........:..:..x.....:............. 35M3D76M3I62M 138/173 79.8% 176/94230402 0.0% 6/173 3.5% 104921763 85292792 +8764 chr4 + 190214555 109347247 109347246 109347465 219 CTTTCCATTCATGTCTCTGGCTGCATCCTTAGCATCTGCTGGGCTTTCAAAGGTGACAAAAGCAAATCCTCTTGATTTGTTGGTTTCATGCTCTTTCATCAAGAGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCACTATTCGTCCATATTAGCCAAATACTGCTTCAAGAGCTTTCTTATTTGTTTCCGTATTAAGCCCACCAATGAAGAACTTTGCTGGACAATCTGCTTCAACTTTTTT chr4 + 94230402 4430713 4430712 4431119 4430713 4430712 4431119 407 CTTTCCATTCATGTCTCTGGCAGCATCTTTAGCATCTGCTGGACTCTCAAACGTTACAAAAGCAAATCCTCTTGACTTGTTGGTTTCACGATCTTTCATCAGGAGGACTGCAGTGGAAATAAAACCATGTTACCCTCTGCTGTAATTAAGCAACAAAACTCAACCTTTATTTAACCTTTAAGCTCAGAACTTCTTAGAGAACATGATCATGTCGTAAGATCAACATTATAGGAGTCATCATAGCTGTTTTGTTGTTTCTAATCTTAGGATGGCAAGAGTATTTTTTGGTTTTTACCTTCCACAATGCGTCCATATTTGCCAAATACAGCCTCGAGGGCTTTCTCATTTGTCTCTGTGTTCAGGCCTCCGATGAACAGTTTCCCGGGACGATCTGCTTCAACCATTTT .....................x.....:..............:..:.....x..x....................:............:.x..........:...x:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......x..x..........x.........x..:..:..:.......:......:..:..:..x..x..x..:.....x.::..:x.x....:............:x.... 107M188I112M 183/219 83.6% 407/94230402 0.0% 188/219 85.8% 104916534 85298021 +3237 chr4 + 190214555 109351930 109351929 109351973 44 CTCTCTCTGTCTCTCTCTCTCTCACACACACACACATACACAAA chr4 + 94230402 75248049 75248048 75248092 75248049 75248048 75248092 44 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagaga ..::....x...........................:...x.:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 34103881 NA +3324 chr4 + 190214555 109358039 109358038 109358121 83 CATGGTGGTACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCAGTTGAATCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:.::.--....:.:...........::........x.xx.x...x..x.....:.::.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 33324842 NA +3641 chr4 + 190214555 109363746 109363745 109363842 97 GTGGCTCACGCCTGTAGTCCCAGCTACCTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCTGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:x....--......:........:..:.........x.xx.x...x::...........:..x.xx:..:..:x.------..x..x...... 10M2D67M6D12M 67/89 75.3% 89/94230402 0.0% 8/89 9.0% 33330545 NA +3090 chr4 + 190214555 109370015 109370014 109370096 82 TTTATTAATTATGTTCATACATAAATGGATTTCTTTTTTTATTTTTTATTTTTGTTTGTTTGCTTTTTTTGAGGTGGAGTCT chr4 + 94230402 49892334 49892333 49892415 49892334 49892333 49892415 82 TTTGTTTGTTATCTCTGTGCACGGGTGGTGGGGTTTTTTCATTGTTTATTTTTGTTTGTTTATTTTTTAGCAGCTGGATTTT ...:..x:....x.:::.:..::::...xxxxx......:...x.................::.....xxx..x....x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 59477681 NA +3193 chr4 + 190214555 109374745 109374744 109374858 114 GAGGAAGAAGAGGAAGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAAGGAAGGGCACAAAAAAATAAAGATCCACAAGAGGGTTTATAATCTATAATAGAGTGAAAGCAAAC chr4 + 94230402 31357957 31357956 31358070 31357957 31357956 31358070 114 GGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAAACATGAGAGTGCATATATGACAAAGAATTTAAGAATAATAAGATTGCCAGAATAAAC .:..:::...x.::.......:.......:.:x::....:.xx.......:.:..:x...x:.:.:.:x.x..x::xx.:..::....x:.x:x....x.xx.:x.:.::.... 114M 66/114 57.9% 114/94230402 0.0% 0/114 0.0% 78016788 NA +3614 chr4 + 190214555 109380512 109380511 109380639 128 CATAATGGCAGGCGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCCTGAACCCAGGAAGCGGAGGTTGCAGTGAGCCAAGATCATGCCAC-------TGCACTCCAGCCCTGGCGACAGCGTG chr4 + 94230402 76033197 76033196 76033323 76033197 76033196 76033323 127 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATG ..:.:...:--..:.x....:.:............:........x.xx.x...x.:.:.........:.:x:xx:..:..:..------..x..x......x-------..::.:.:.:x....x:xx....:.. 9M2D72M6D13M7I26M 82/120 68.3% 127/94230402 0.0% 15/120 12.5% 33347315 NA +3247 chr4 + 190214555 109382752 109382751 109382821 70 TGACAGAGAG---AGACTCTGTCTCAAAAAAAAAAAAACAAAAACAAACAAAAAAAAACAAACAACAACCAAA chr4 + 94230402 58421265 58421264 58421337 58421265 58421264 58421337 73 TAAAAGAGAGCTGGGATTTTTTTTTAAAAAAAAAGAAACTCAAACAAACAAAAGAGAACAACTAACAGTGAAA .:.x......---:..:.:.x.:.:.........:....xx............:.:.....x:....::x... 10M3I60M 52/70 74.3% 73/94230402 0.0% 3/70 4.3% 50961487 NA +3484 chr4 + 190214555 109382777 109382776 109382833 57 AAAAAAAAAACAAAAACAAAC-AAAAAAAAACAAACAACAACCAAAAAACCCAGCAAA chr4 + 94230402 37350817 37350816 37350874 37350817 37350816 37350874 58 AAAAAAAAACCACCAACGAACCAAAAAAAAACAAACAACAAAAAAAAAACCCACCAAA .........x..xx...:...-...................xx..........x.... 21M1I36M 50/57 87.7% 58/94230402 0.0% 1/57 1.8% 72031960 NA +3237 chr4 + 190214555 109404207 109404206 109404454 248 AGCCAAGATCTCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGAC----TCCAGAAAAAAAAAAAGAAAGAAGGAAGGAAGG---AGAGAAAGAGAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAA chr4 + 94230402 2498404 2498403 2498657 2498404 2498403 2498657 254 AGCCGGGAGTCCTCCTCT-CACCCCAGCATGGCAGGGAGGGGGGGCTCGTGTCCCCAAGCAGTGAGTGAGGGGGGTGAGGCGGGTGCGGGGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ....::..x::.x..x..-...:.....x...xx.:x..:.x.:.x:----...xx..:x.:x:.:x..::.::.x:...x:..---:.:..x:..x:x.xx:.....x.:.::.::...x:.x:.::..x::x:.x.:x..x...x:x:::...x:.::..x..x...x:xx::..x:.::...::::..x.:.:...:xxxxx..:.:::...:.:...::........:.x.:::x.........x:..... 18M1D28M4I33M3I168M 130/247 52.6% 254/94230402 0.0% 8/247 3.2% 106905803 83308752 +3904 chr4 + 190214555 109404271 109404270 109404457 187 AAAGAAGGAAGGAAGGAGAGAAAGAGAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAAGAA chr4 + 94230402 49044653 49044652 49044827 49044653 49044652 49044827 175 AAAGATTAAAG--AGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGA-------------AAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA .....xx:...--..:.:....x:.....xx::.:.x..xx.......x.::x..x:....:x.--...x:......:-....:xx..........::..:.x...::.x......-------------.::.......x....x.:::..xx:..:xx:.:.:..:.....:x:..x..x...x.x:.. 11M2D51M2I12M1I37M13D61M 111/172 64.5% 175/94230402 0.0% 18/172 10.5% 60359618 NA +3882 chr4 + 190214555 109404301 109404300 109404473 173 AGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAGAAGGAAGAA--AGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAAGAAGGAAAGAAAGAAAGAA chr4 + 94230402 49044653 49044652 49044820 49044653 49044652 49044820 168 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGG--TGAAAAATGAAAGAAAAGAAAGAATGAAGCA-------GAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .:...xx::.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x:....:x.--...x:...:.:......:--.:...:.....:....--x....:.x.:...:..:.......x....x.-------:..:.xx..:.xx..:....:.....:x:..x..x.. 62M2I18M2I16M2D31M7D37M 105/164 64.0% 168/94230402 0.0% 13/164 7.9% 60359648 NA +3586 chr4 + 190214555 109404303 109404302 109404452 150 AGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGA chr4 + 94230402 49044660 49044659 49044810 49044660 49044659 49044810 151 AAAGAGAAAAGAATAAGAGAT-TAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA .:....:......x:.:...x-x.::.:x:.xx.......x.::x..x:....:x.--...x:......:....::xx.....:...::.::::x..:::.x::...:..:...:...x....x.:::..xx:..:xx..:....::...:. 21M1D34M2I94M 88/149 59.1% 151/94230402 0.0% 3/149 2.0% 60359643 NA +3314 chr4 + 190214555 109404305 109404304 109404412 108 AGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGG chr4 + 94230402 15855376 15855375 15855480 15855376 15855375 15855480 105 AGAGTAAAGAGAGAGAAGTGGACA---AGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ....x.....:...:.::x:..x.---.......xxx::.x..:xx...::.:.:.xxx...:.....::..........::.:.:.:x....::...x...::.:.. 24M3D81M 66/105 62.9% 105/94230402 0.0% 3/105 2.9% 93548929 NA +3340 chr4 + 190214555 109404357 109404356 109404454 98 GAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAA chr4 + 94230402 58935722 58935721 58935814 58935722 58935721 58935814 93 GAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAA-----AAAGAGGAAA ...x..:.::..:.x.:x..xx..:..:.:.x:.:..:.:...:...x...:...x..:.:......:..x:.x.x....:..-----.....:.... 83M5D10M 62/93 66.7% 93/94230402 0.0% 5/93 5.4% 50468635 NA +3067 chr4 + 190214555 109404367 109404366 109404493 127 AAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 70762130 70762129 70762256 70762130 70762129 70762256 127 AGGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGAAGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAGGCATTAAAAA .:.:..:.:..x..x:.:...:..x:...:..x......x..x..::.xxxx....:x.::::.::..x...xx....:.x:.x:xx.x:xx...::....:..:...:...:....:x.xx..:.. 127M 73/127 57.5% 127/94230402 0.0% 0/127 0.0% 38642237 NA +3068 chr4 + 190214555 109404390 109404389 109404459 70 AGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAAGAAGG chr4 + 94230402 94050835 94050834 94050904 94050835 94050834 94050904 70 AGGAAGAGGGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAAG ......::..:.........:...:.:.....x::..:.x:.:x:x:..:.xx...:.......::..:. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 15353555 NA +3010 chr4 + 190214555 109404464 109404463 109404528 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 80389791 NA +3644 chr4 + 190214555 109408331 109408330 109408404 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 33375127 NA +3305 chr4 + 190214555 109415702 109415701 109415766 65 TTGTTTTTGTAGAGACCCAGCTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGAGAGGGGGC chr4 + 94230402 13783403 13783402 13783464 13783403 13783402 13783464 62 TTGCTTTTGCA---CCTCAGCTGGGTTGTTTTTTGGTTTTTTTTTTTTTTTTGCAGAAAGGTGGC ...:.....:.---x.:.....:.x..x......xx.................:...:...x... 11M3D51M 50/62 80.6% 62/94230402 0.0% 3/62 4.8% 95632299 NA +3835 chr4 + 190214555 109450517 109450516 109450600 84 ACGCAGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGGGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......:--....x....:.:...........::........x.xx.x...x::...........::.x.xx:..:..:.. 10M2D72M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 33417321 NA +3015 chr4 + 190214555 109456301 109456300 109456353 53 ATGTCATTCTGCAAATAAAGACAGGTTTTTTTTGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 58164876 58164875 58164928 58164876 58164875 58164928 53 ATTTCAGCCTGCGAGTAAACACACATTGTGTTTGTTCTTTTTTTTTTTTTTTT ..x...x:....:.:....x...x:..x.x......:................ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 51291425 NA +3098 chr4 + 190214555 109476997 109476996 109477079 83 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 33443800 NA +3003 chr4 + 190214555 109482946 109482945 109482998 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 86235224 NA +3036 chr4 + 190214555 109482961 109482960 109483000 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 105073879 85140676 +3601 chr4 + 190214555 109527090 109527089 109527148 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x..........:..:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 33493884 NA +3066 chr4 + 190214555 109632576 109632575 109632636 61 TTTTTAAATTTTTTATCCCTTTTATGTCTTCTGTCATTGCTTTTTTTTTTTTTTTTTTAAG chr4 + 94230402 43801826 43801825 43801886 43801826 43801825 43801886 61 TCTTCAATATTTCAATATCTCTTCTATATTTTGAAATTGCTTTTTTTTTTTTTTTTTTAAG .:..:..xx...:x..x:..:..x.:.x..:..xx.......................... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 65830750 NA +3573 chr4 + 190214555 109636694 109636693 109636777 84 ATATGGTGGTGCCCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::.......--..x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 12M2D70M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 33603498 NA +3382 chr4 + 190214555 109656343 109656342 109656432 90 TTTACTCTCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGTTTCCCTCTGTGGCCCAG-----------GCTGAAGTGCAG chr4 + 94230402 28697644 28697643 28697744 28697644 28697643 28697744 101 TTTTTTCAATGCTCTTTTTTTTTCTATTTTTTTTCTTTTTTTCCTCATTTGATAATAATTTTTACCTCTGTAAACCTGTATTTAAATGCGCTTAAGTGCAG ...x:..xx.:..:.........:.x........:.......::.:x....:x:.:.:xx...x.......::x..x.-----------...x........ 78M11I12M 64/90 71.1% 101/94230402 0.0% 11/90 12.2% 80958699 NA +3473 chr4 + 190214555 109660676 109660675 109660758 83 CGTGGTGGTACATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:..--.x....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 12M2D69M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 33627479 NA +3381 chr4 + 190214555 109705935 109705934 109706054 120 CACTGCACTCCAGTCTGGGTGACAGAGTAAGACACTCTTTAAAAAAAAAAAAA--------AAA------AAAAAAAAAAAATATATATATATATATATATATATATATATAATATATATAAAATACATATATA chr4 + 94230402 75276438 75276437 75276567 75276438 75276437 75276567 130 CACTATGTTCCAGT---GATGA-AAAGTTATTCCCTCTGTTAAAAAAGCAAAAGTGATTAGAAACATTCCAAAACAAAACGAGACATTTGAATATATATATATATACATATTATAAAGAGAGTGTACATATATA ....::::......---.:...-.:...x.xx.x....x.x......:x....--------...------....x....x:.x.:..x.:x...............:....x...x.x.x.:x:.......... 14M3D5M1D30M8I3M6I64M 86/116 74.1% 130/94230402 0.0% 18/116 15.5% 34429497 NA +3616 chr4 + 190214555 109705972 109705971 109706031 60 TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT chr4 + 94230402 1494993 1494992 1495052 1494993 1494992 1495052 60 TTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ..:.:::...x.:.........x.:...............:.:..:...:.....x.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 108210979 82003576 +3068 chr4 + 190214555 109705975 109705974 109706030 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 108210975 82003580 +3121 chr4 + 190214555 109705977 109705976 109706030 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 19675901 NA +3373 chr4 + 190214555 109705977 109705976 109706033 57 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:......x........:.:..:...:.....x....::.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 108210977 82003578 +3132 chr4 + 190214555 109720571 109720570 109720633 63 ATTCAAAAAAAAAAAAAAAAAAA-AAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1494992 1494991 1495055 1494992 1494991 1495055 64 ATTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .....:::...x.:.........-.:......x.x......:.:..:...:.....x....::. 23M1I40M 48/63 76.2% 64/94230402 0.0% 1/63 1.6% 108225579 81988976 +3121 chr4 + 190214555 109720580 109720579 109720633 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 19690504 NA +3282 chr4 + 190214555 109720580 109720579 109720635 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 108225580 81988975 +3456 chr4 + 190214555 109720582 109720581 109720670 89 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATGAATTTTAAAAAAATAAAAAAAGAAA chr4 + 94230402 51472490 51472489 51472578 51472490 51472489 51472578 89 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAA ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:....:x:x:..xx.x...:..:.xx.....x... 89M 61/89 68.5% 89/94230402 0.0% 0/89 0.0% 58248092 NA +3496 chr4 + 190214555 109720582 109720581 109720637 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 108225582 81988973 +3282 chr4 + 190214555 109720584 109720583 109720639 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 108225584 81988971 +3702 chr4 + 190214555 109720586 109720585 109720681 96 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATGAATTTTAAAAAAATAAAAAAAGAAAGAGAAAAAAAT chr4 + 94230402 51472490 51472489 51472580 51472490 51472489 51472580 91 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGA-----GGAAAAGTGAAAGAAGTTCAAAAACAAAAT ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:......-----::....:.:...:...xxx:.:..x..... 61M5D30M 65/91 71.4% 91/94230402 0.0% 5/91 5.5% 58248096 NA +3388 chr4 + 190214555 109720589 109720588 109720642 54 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:x.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 24172169 NA +3305 chr4 + 190214555 109720591 109720590 109720644 54 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 24172171 NA +3447 chr4 + 190214555 109720935 109720934 109721013 79 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAGGAGGCGGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:...........::........x.xx.x...x.:........:..:..x:xx:..:...:. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 33687734 NA +3188 chr4 + 190214555 109727600 109727599 109727752 153 AGTAAATTTTGAGAAGCCTGTAGAAGATGAAAAAGATTAAAAAGAAAGATTAAGCCAG------GTGTAGTGGGGGCATGG--------------CCTATAGTCCTAGCTATTTGGGAAGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGTTGGAGGCTGCAGGGAGCAATG chr4 + 94230402 76033114 76033113 76033286 76033114 76033113 76033286 173 AGTAGACTGAAAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ....:.:.xx:...:.xxx.:.....::::x........:::.xxx:.x..::.xx..------:...x:..:::.x...:--------------.x.:....:.:.....:...::.:......x.xx.x...x::.....:.....:..:.xx:.....:..::x:::... 58M6I17M14I78M 90/153 58.8% 173/94230402 0.0% 20/153 13.1% 33694486 NA +3310 chr4 + 190214555 109732717 109732716 109732786 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGTGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:.........:.::........x.xx.....xx:.x.......:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 33699520 NA +3083 chr4 + 190214555 109756849 109756848 109756917 69 GTACAAGACCGAGACTCCGTCTCGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 73002023 73002022 73002091 73002023 73002022 73002091 69 GTAAAATACTGATATTCTGTCTTGGAGACAAATGAAAAAATGAAGGAGGAAAAAGAGAGAGAAAGAAAG ...x..x..:..x.:..:....:.:.::x..:x:.:...:x:...:.:....:.:...:.......... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 36754826 NA +3044 chr4 + 190214555 109756880 109756879 109756995 116 GAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATTCTGAGGAGGATCA chr4 + 94230402 78003581 78003580 78003692 78003581 78003580 78003692 112 GAAAGATATTGAAAAATGAAATCAGAGCAGCAAAAATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAAGTAAAAAACAGGGAAGGAATGAAAC----AGGAGAACTA ......x.xx:..:..x....xx.:::x..x..:..x.xx.:.......:.x.:...:...:...x:.:.xxx.x...x..:...x.::...:...x....:----.....:.::. 102M4D10M 71/112 63.4% 112/94230402 0.0% 4/112 3.6% 31753299 NA +3140 chr4 + 190214555 109756896 109756895 109756986 91 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATTCTGA chr4 + 94230402 41112178 41112177 41112268 41112178 41112177 41112268 91 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATATTCCTGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..:::x..:x.x.:.... 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 68644718 NA +3714 chr4 + 190214555 109759754 109759753 109759845 92 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAGGTTGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033197 76033196 76033291 76033197 76033196 76033291 95 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ..::....:--.::.x....:.:...........::........x.xx.x...x.........:...:..x..x:..:..:.----....-...... 9M2D71M4I4M1I6M 68/90 75.6% 95/94230402 0.0% 7/90 7.8% 33726557 NA +3098 chr4 + 190214555 109771718 109771717 109771770 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGAAGATTAAGTGCTAGGCTCTGA chr4 + 94230402 8746563 8746562 8746615 8746563 8746562 8746615 53 AAAAAAAAAGAAAAAAAAAGAAGAATAGTAAAGGAGTAAGTGCCACTCTGTGA .........:.........:..:..x....:.:..x.......:.xx..x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 101025155 89189400 +3036 chr4 + 190214555 109808328 109808327 109808389 62 GAAGGAGGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAACCTGAAAACAATCAAGTCT chr4 + 94230402 30971226 30971225 30971287 30971226 30971225 30971287 62 GAGGGGGGAAAAAAAGAAGAAAGAAGAAAAAAAGAGACTCAGATCTGGAAAGCAGTAAGTCT ..:..:............:.:.:.......:..:...xxx::.:...:...xx.x:...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 78837102 NA +3075 chr4 + 190214555 109813640 109813639 109813694 55 TAGATATAAGATGAAATGTACTTATTTGTGTTTCTCCTTCTTTTTTTTTTTTTTT chr4 + 94230402 44909014 44909013 44909068 44909014 44909013 44909068 55 TAAATACAGGACTAAATATACTTGTTTGGATTTCTTTTTTTTTTTTTTTTTACTT ..:...:.:..:x....:.....:....x:.....::..:...........x:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 64904626 NA +3144 chr4 + 190214555 109839071 109839070 109839151 81 TTGTCTATTTTTGTTTGTTTCTTTTGTGGTTGTTGTTTGTTTCTTTTTGTTTCTACTTTCTGGGAGATTTGCTTAACCATA chr4 + 94230402 77098088 77098087 77098168 77098088 77098087 77098168 81 TTGTCTTTCTATACTTGTTTTTTTTTTTGTTGTTGTTTTCTTTACTTTTCCGTCATTTCCTGAGAGCTTTTTATATCCATA ......x.:.x.::......:....x.x..........x:..:x:...x::x::.:..:...:...x...x:x..x..... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 32740983 NA +3011 chr4 + 190214555 109850384 109850383 109850464 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 52478355 NA +3022 chr4 + 190214555 109850388 109850387 109850468 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 52478359 NA +3033 chr4 + 190214555 109850392 109850391 109850472 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 52478363 NA +3203 chr4 + 190214555 109852136 109852135 109852213 78 TTCTCCTGTGTAAGGTGTAAGAGCTGTGTGTGTGTGCATGCATGTGTGTACATACATGTGTGGAAAAGTGGAGAAGAA chr4 + 94230402 32774389 32774388 32774463 32774389 32774388 32774463 75 TTCTTCTGC---AAATGCATGTGGTGTTTGTGTGTGCATGCATGTATGCAGATGCATGTGTGCATAAGGTAGTAAGAA ....:...:---.::..:.x.x.x...x.................:..:.x..:........x.x...xx::x..... 9M3D66M 55/75 73.3% 75/94230402 0.0% 3/75 4.0% 77077747 NA +6184 chr4 + 190214555 109858773 109858772 109859036 264 TTTTAAAGTTCTGTTACTTCTTTCTACAATAGCTTGGCCTTGTGGGTTA-TAAGGAATACCAGTAATATGTTTAATATGCCACTGATCAAGAAAATTTTTAAAAGCTTTACTGCAATAGGCTGGACCATTGTCTGTTTTGAGCTCACTAGGAATTCCCATAACCGCAAAACATGAAAACATATGTTTTTTAACATAAGAAGTGGCTTCTCTGGTTTGACAGGTAGCCCAGATGAAATTGGAAAAGGTGTCAACTGTGACATGCAC chr4 + 94230402 19065337 19065336 19065600 19065337 19065336 19065600 264 TTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCT-GTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ......x.....:..xx:::x......x..x.::......-.....:x.-.xx:.:.....x...x.:.....x.:x:x...:xxx.xx.....x.::::..:xx:x:x...:xx:........:..............x.x:.xxxxx..x..x..............:..xx..xxx.x...::...:x....:x:x..:xx:.....::.x....xx...:.....x..:....x:xx.x.x..:..x.:x.xx..:..:.. 40M1D8M1I215M 163/263 62.0% 264/94230402 0.0% 2/263 0.8% 90793436 NA +4345 chr4 + 190214555 109863339 109863338 109863453 115 GACCCTGGGCAGATTCCTTAAGCTTCCTGAACCTTGGTTTTCTCATCTTTAAAATGGGGATGATAATAGTACTACCTATCCCAT---GCTTTTGTGAGGATTGAGTCAGTCCATCCTT chr4 + 94230402 83501141 83501140 83501255 83501141 83501140 83501255 115 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTA--ATTACCTACCTCACAGGGGTATTGTGAGG-CTAAATCAATTCCTGTTT ...:.......:...x.....x..x:x..x:...::......:..:..x........:.x.....:..--.:......:.:..:---.x.x........-:.:.:...:.:.x.x:.. 68M2D14M3I12M1D18M 81/112 72.3% 115/94230402 0.0% 6/112 5.4% 26362198 NA +3007 chr4 + 190214555 109868440 109868439 109868513 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAATTTGGGGGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x::......::::.::.x.xx:..:..:.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 33835236 NA +3152 chr4 + 190214555 109881875 109881874 109881951 77 TATACATATGTGTATATATATATGTGTATATATATATATATAAACA--CACACACATACATACACACACACAAGGTAAA chr4 + 94230402 70094142 70094141 70094220 70094142 70094141 70094220 79 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACATTCTAGAAAAA .:..x........:.x.:.x.:.x.....:.....:..........--:x..:.x...:...::....:x.x..:x... 46M2I31M 55/77 71.4% 79/94230402 0.0% 2/77 2.6% 39787733 NA +3799 chr4 + 190214555 109881892 109881891 109881978 87 ATATATGTGTATATATATATATATAAACACACACACATACATACACACACACAAGGTAAA----TACATATATACACACACACAAGGTATA chr4 + 94230402 23247722 23247721 23247812 23247722 23247721 23247812 91 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATA ..:.:...:.::.:.:.:..x...:....:.:::...:..................x...----.....:x...x.:.:.:.:.x.:x... 60M4I27M 61/87 70.1% 91/94230402 0.0% 4/87 4.6% 86634170 NA +3356 chr4 + 190214555 109882365 109882364 109882454 90 TCTTTGAAAAGTCATGGCAAATAGGAGAGGTGCCACAAGACCACAGATGGGTACATTTCATGTTTATTTTT---AAGAGAGGAACAGAAAGGA chr4 + 94230402 87584328 87584327 87584420 87584328 87584327 87584420 93 TCTTTGAAACATCATGGCAAAGAAGCAAAGTCCTCAATGACTACAGAAAGGCACATTTATTGTGTCTCTTCTAGAAGAGAGAAGCTGGAAAAA .........x:..........x.:.x:.:..x.:xx.x...:.....x:..:......xx...x.x.:..:---.......:.:.x.:..::. 71M3I19M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% 22298037 NA +3635 chr4 + 190214555 109958787 109958786 109958860 74 GTGCACCTGTAATCCCAGCTACTTAGGAGGCCAAGGCAGGAGAATCGCTTGAACACAGAAGGCTGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:..........:::....::..x.xx.x...x.:.......x......x:.x:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 33925583 NA +3347 chr4 + 190214555 109997724 109997723 109997804 81 ATGGTGGTACACATCTGTATTTCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCGCTTGAGCCCAGGAAGCTGAGATTGCA chr4 + 94230402 76033198 76033197 76033276 76033198 76033197 76033276 79 ACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .::.....:...:.--...x.............::........x:xx.x...x.:.....:.....:.:x:.x:.::..:. 14M2D65M 55/79 69.6% 79/94230402 0.0% 2/79 2.5% 33964526 NA +3063 chr4 + 190214555 110004987 110004986 110005058 72 TTCTAATTTATTTTCTTTCTTTCTTTCTTTTCTTTTTCTTTTTCTCTGTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 15335359 15335358 15335430 15335359 15335358 15335430 72 TTCTGTTTTCACTTCGTACTCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTTATT ....:x...xx:...x.x..:.....::..:..::.:..:.....x..::......x...x...x....x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 94669628 NA +3080 chr4 + 190214555 110015609 110015608 110015674 66 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCACGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x:..--......:...........::........x.xx.x...xx:.x:........:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 33982408 NA +3300 chr4 + 190214555 110017228 110017227 110017300 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::......:.x.xx.x...x.:........::.:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 33984023 NA +3542 chr4 + 190214555 110084059 110084058 110084149 91 TATATAACATATATATGCTATATATGATATATAACATATATATGATATATATGATATAT---ATAACATATATGTGATAATGATATATATGATA chr4 + 94230402 26320252 26320251 26320344 26320252 26320251 26320344 93 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTG-TATATGTAATA ...x.x....:.....:...:....x.......x:.....:.xx....x...x..:...---...::....x.x.::..x..-.....:.:... 59M3I20M1D11M 67/90 74.4% 93/94230402 0.0% 4/90 4.4% 83763807 NA +3376 chr4 + 190214555 110084485 110084484 110084549 65 AATGTATACACATATATATCATATATGTGTATACATTATATACACTTACACACACACACACACAC chr4 + 94230402 73857046 73857045 73857110 73857046 73857045 73857110 65 AATATGTGAATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCAC ...:.:.:x.:....:.:.x......:.:x..:............x:::.........:..x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 36227439 NA +3154 chr4 + 190214555 110084532 110084531 110084613 82 ACACACACACACACACACACACACACACACAGATATATATATATATATATATATATATTT-------------TTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 74526066 74526065 74526160 74526066 74526065 74526160 95 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGTTTCTGTtttgcttg ....xx.x.:x..............::x...x.:.:.x.......::.......:.....-------------..x:..x...:.x....x:... 60M13I22M 60/82 73.2% 95/94230402 0.0% 13/82 15.9% 35558466 NA +3017 chr4 + 190214555 110084568 110084567 110084606 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 85291942 NA +3928 chr4 + 190214555 110094111 110094110 110094191 81 CGGTGGCATGCGTCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....--...::x..................::........x.xx.x...x::...........:..x.xx:.....:.. 6M2D73M 60/79 75.9% 79/94230402 0.0% 2/79 2.5% 34060912 NA +3822 chr4 + 190214555 110095342 110095341 110095424 83 CGTGGTGGCACACGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCATGAGAATCACTTGAACCCAGGAGAAAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::....--....:.:.......:...::........x.x..x...x.............:..xxxx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 34062145 NA +3150 chr4 + 190214555 110120764 110120763 110120821 58 ACTTCTCAGCTGGTTCTTTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGAA chr4 + 94230402 66248608 66248607 66248665 66248608 66248607 66248665 58 ACTTTTCACATGACTCTTTTTTCTTTCTTTTTGTCTTATTTTTTCTTCTCTTTCTGAA ....:...xx..::......:.:...:..:..x....x......:..:.:...:.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 43872156 NA +3226 chr4 + 190214555 110132716 110132715 110132782 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAGATCACTTGAACCCAGGATGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x::.x.............:.xx.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 34099505 NA +3072 chr4 + 190214555 110139139 110139138 110139192 54 TATATTTTTAATTAAAAAATAAACAACAAAATGAAAACGTTTTTCTTCTATGAA chr4 + 94230402 69419571 69419570 69419624 69419571 69419570 69419624 54 TAAGTTTTTATTTAAAAAAAAAACAACAAAATCACAACATTTGTTTTCTGTAAA ..x:......x........x............x.x...:...x.:....:.:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 40719568 NA +3237 chr4 + 190214555 110157530 110157529 110157613 84 ACGTGGTGGCATGCACCTGTAGTCCCAGCTACTCATGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....--.....x......:.........::x:........x.xx.x...x::........::.:..x:xx:..:..:.. 9M2D73M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 34124334 NA +3039 chr4 + 190214555 110158575 110158574 110158679 105 ATATATATATGTATATATATACACACACACACATATATATACACACACATATATACACGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 36538953 36538952 36539057 36538953 36538952 36539057 105 ATATAAATAAGTATAAATGTACACACACAGGCATACACACAAGCATGTATGCACTTACGAGAGCAGGTATAGCGATGAATAAAATCCTATTTGCTTTTCATCTAA .....x...x.....x..:..........x:....:.:.:.x:..:::..::.:x:...x.x::.x:....xxx..:x...x.x.::.x...x:....:x.:.:. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 73619622 NA +3357 chr4 + 190214555 110158584 110158583 110158666 83 TGTATATATATACACACACACACATATATATACACACACATATATACACGTGTATATATATATATATATATATATTTTTTTTT chr4 + 94230402 54963193 54963192 54963275 54963193 54963192 54963275 83 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTT .......x:.....x.::.....x......:.........xx:.::::..:x:...:.:.:..x....::x.xx.:...:... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 55195391 NA +3256 chr4 + 190214555 110158593 110158592 110158674 82 ATACACACACACACATATATATACACACACATATATACACGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 74526074 74526073 74526155 74526074 74526073 74526155 82 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGTTTCTGTttt ..x............:..:x.:.:.....x........:::.:...:...x..x..xxx.x:.x:..x:..x...:.x.... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 35632519 NA +3017 chr4 + 190214555 110158637 110158636 110158675 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 85366011 NA +3264 chr4 + 190214555 110182768 110182767 110182837 70 CGTGGTGGCCCATGCTTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:x..:.--....:.:........:..::........x.xx.x...x...........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 34149571 NA +3060 chr4 + 190214555 110186791 110186790 110186857 67 GAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTATATATATACA chr4 + 94230402 1494989 1494988 1495055 1494989 1494988 1495055 67 GAGATTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ....:..x.xxxx.x.:.........x.:....x..........:.:..:...:x....x....:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 108691802 81522753 +3443 chr4 + 190214555 110186797 110186796 110186847 51 CTGTCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTA chr4 + 94230402 23965212 23965211 23965262 23965212 23965211 23965262 51 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTA ....x...:.::............:.x..:...........x......... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 86221585 NA +3223 chr4 + 190214555 110186803 110186802 110186855 53 CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTATATATATA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:...............:.:..:...:..x..x....::. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 108691800 81522755 +3275 chr4 + 190214555 110189140 110189139 110189238 99 CAAGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAAGATCGCTTGGACCAAGAAGCGGAGTTTGAGATTACAGTGAAGTATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC----TTTGGG----CTGTAGAACATGAT ..x:.......::.--....:.:...........::........x.xx.x::.x.:....:...x......----....:.----.x..::.::..... 14M2D55M4D6M4D14M 65/89 73.0% 89/94230402 0.0% 10/89 11.2% 34155943 NA +3096 chr4 + 190214555 110189576 110189575 110189643 68 CAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA------AGAAGAAAATG chr4 + 94230402 44890373 44890372 44890446 44890373 44890372 44890446 74 CATTAATACCTCTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATG ..x:..x..:::x.:..x.x..::.............:...........::......------.:..::..... 57M6I11M 50/68 73.5% 74/94230402 0.0% 6/68 8.8% 65299203 NA +3022 chr4 + 190214555 110189578 110189577 110189634 57 GCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAAG chr4 + 94230402 13073566 13073565 13073622 13073566 13073565 13073622 57 GCAACTTTGTGTTTTTAAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGAG ....xx:.x...:.:x...............xx:.:...........:.:....:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 97116012 93098543 +3144 chr4 + 190214555 110189580 110189579 110189637 58 AAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGA----GAGAAAAGAAG chr4 + 94230402 76607301 76607300 76607362 76607301 76607300 76607362 62 AAACCTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAAG ..:x.....:........x....x.:.........:....:...:::----......:.... 47M4I11M 46/58 79.3% 62/94230402 0.0% 4/58 6.9% 33582279 NA +3064 chr4 + 190214555 110189592 110189591 110189628 37 CAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 + 94230402 75300455 75300454 75300491 75300455 75300454 75300491 37 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...................:.:.............:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 34889137 NA +3095 chr4 + 190214555 110189595 110189594 110189630 36 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:...............:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 34889139 NA +3348 chr4 + 190214555 110189597 110189596 110189632 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 34889141 NA +3004 chr4 + 190214555 110189599 110189598 110189633 35 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAA chr4 + 94230402 75300456 75300455 75300490 75300456 75300455 75300490 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA ................:...............:.. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 34889143 NA +3125 chr4 + 190214555 110189603 110189602 110189661 59 AAAAAAAAAAAAGAGAGAGAGAGAGAGAAAAGAAGAAAATGAAGTTATACTTGTTTACT chr4 + 94230402 7875213 7875212 7875271 7875213 7875212 7875271 59 AAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAGGTCTTGGAATTAAATAAATTTTCT ............:................:.....:xxx..:.:...x.:xx:...x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 102314390 87900165 +3340 chr4 + 190214555 110204944 110204943 110205015 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGGGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.:.........:.::.x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 34171738 NA +3152 chr4 + 190214555 110213894 110213893 110213937 44 AACTGTGTCTCAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300446 75300445 75300489 75300446 75300445 75300489 44 AAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ..x..x.x.:x................................. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 34913448 NA +3101 chr4 + 190214555 110213905 110213904 110213945 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATTTATTGT chr4 + 94230402 75300459 75300458 75300499 75300459 75300458 75300499 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTAT ...............:...............:...:.x.:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 34913446 NA +3335 chr4 + 190214555 110214205 110214204 110214264 60 TGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x......:.........:.::........x.xx.x...x.:.......:.:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 34181000 NA +3060 chr4 + 190214555 110214326 110214325 110214376 51 AAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAATAGAGAG chr4 + 94230402 21774126 21774125 21774176 21774126 21774125 21774176 51 AAGCAAATATTTGTATCAAAAAAAAAAAAAAAGGAGAAAAGACATAGTGAG ......:xx.:...x.................::.:......x....x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 88440200 NA +3689 chr4 + 190214555 110232371 110232370 110232449 79 GTGGCACATGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTGGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......::..........::........x:xx.x...x....x..:.....:..x..x:.....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 34199170 NA +3695 chr4 + 190214555 110233563 110233562 110233656 94 TCTATGTGTATGTGTATGTGTATGTGTACGTATGTGTGTATGCATGCGTATGCACGTGTG--TATGTGTATGTGTGTATGTATGTGTATGCACGTG chr4 + 94230402 21109208 21109207 21109303 21109208 21109207 21109303 96 TCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...:..x.::.:.x...:....:x:::.::..:x:.....:x:..:......:..x::..--.x.......:........x..:..:......::. 60M2I34M 62/94 66.0% 96/94230402 0.0% 2/94 2.1% 89124355 NA +4040 chr4 + 190214555 110233573 110233572 110233706 134 TGTGTATGTGTATGTGTACGTATGTGTGTATGCATGCGTATGCACGTGTGTATGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTGT---GTGTATGTATGTGTA chr4 + 94230402 21109190 21109189 21109326 21109190 21109189 21109326 137 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTA ..:x...:::.:.....x:x.:..x.:....x:..::...:x...:.:.::x:.....:x.:.:::.:.:.::x:....x:x.......:........x..:..:......::.x.xx.---..x.x...:x..... 119M3I15M 82/134 61.2% 137/94230402 0.0% 3/134 2.2% 89124383 NA +4017 chr4 + 190214555 110233607 110233606 110233754 148 TGCGTATGCACGTGTGTATGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTGTGTGTATGTATGTGTATGCATGTGTGTATGTATGTGTATGCACGTGTG-----TGTGTATGTGTGTGTA chr4 + 94230402 21109190 21109189 21109326 21109190 21109189 21109326 137 TGCTTATACATGTGTGTCTCTGT--GGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATAT--------------GTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTA ...x...:..:......x.x...--.x.:....x...:....:x...:.:.::x:....::x.:..:..:.:.:.x.:..:x.x.......:.--------------.......x..:..:......::.x.-----x..x.x....x..... 23M2D68M14D25M5I16M 91/132 68.9% 137/94230402 0.0% 21/132 15.9% 89124417 NA +3350 chr4 + 190214555 110233618 110233617 110233752 135 GTGTGTATGTGTATGTGTGTA--TGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACG-------TGTGTGTGTGTA---------TGTATGTGTATGCATGTGTGTATGTATGTG-TATGCACGTGTGTGTGTATGTGTGTG chr4 + 94230402 79265521 79265520 79265674 79265521 79265520 79265674 154 GTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATG ......:....:........:--.....:.::..:........:.:::.::x.::...x...:.x...:-------.:.:.:x:..:.---------.x.:x.....::x...::.x.x....x...-.xx....x...:.x.:..::.x.:.. 21M2I46M7I12M9I30M1I26M 88/135 65.2% 154/94230402 0.0% 19/135 14.1% 30968097 NA +3754 chr4 + 190214555 110233661 110233660 110233786 126 TGTGTGTATGTATGTGTATGCACGTGTGTGTGTGTATGTATGTGTATGCATGTGTGTATGTATGTGTATGCACGTGTG--TGTGTATGTGTGTGTATGTATGTGTATGCACGT---------GTGTATGTGTGTGTA chr4 + 94230402 21109190 21109189 21109326 21109190 21109189 21109326 137 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTA ..:x.:..::.:.....x.x:::.x.:..:.x.:......:x:::..::.:x:.....:x...::.....:..x::..--.x...:.:.:........x..:..:......::---------..x.x....x..... 78M2I33M9I15M 80/126 63.5% 137/94230402 0.0% 11/126 8.7% 89124471 NA +3376 chr4 + 190214555 110233672 110233671 110233856 185 ATGTGTATGCACGTGTGTGTG---TGTATGTATGTG-----TATGCATGTGTGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTA chr4 + 94230402 21109139 21109138 21109326 21109139 21109138 21109326 188 ATGTCAAAGCATCGGTGTATGGGCTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCT----GTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTA ....xx.x...:xx....:..---..x::....x..-----..x.x.x:.x..:x.:..::...:..:x:x....x.:....x.:.:....:x:.::.:..:x.::..::x...::..:....:x:...:x.x.----....:.......:.:x:....::.:::....x.xx..::-..x.x...:x..... 21M3I12M5I93M4D39M1D15M 108/180 60.0% 188/94230402 0.0% 13/180 7.2% 89124533 NA +3639 chr4 + 190214555 110233686 110233685 110233826 141 GTGTGTGTGTATGTATGTGTATGCATGTGTGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTA-------TGTATGTGTATGCAC---GTGTGTATGTGTGTGTATGTATGTGTATGCACGTG---------TGTATGTGTGTATGTATGTGTA chr4 + 94230402 79265519 79265518 79265678 79265519 79265518 79265678 160 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA ..........:..:......:..xx...:.:..::..:::..:.....::.::x:::...x.....x:.-------.x...:.:x......---.:x.x.x..x....::.x:.:::.x.x..:.x...---------.....x.:.::..x....x... 69M7I15M3I35M9I22M 91/141 64.5% 160/94230402 0.0% 19/141 13.5% 30968167 NA +3802 chr4 + 190214555 110233686 110233685 110233817 132 GTGTGTGTGTATGTATGTGTA---------TGCATGTGTGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTA------TGTATGTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.x....:x:....x.:.---------....x.....:x::.:x.:::::::x........:.:.x....x..:.------.x..:.........:x..::.:......:.:.x:::.....:....:.::x:.:....:::.. 21M9I48M6I63M 82/132 62.1% 147/94230402 0.0% 15/132 11.4% 105019511 85195044 +3706 chr4 + 190214555 110233689 110233688 110233804 116 TGTGTGTATGTATGTGTATGCATGTGTGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACGTG chr4 + 94230402 21109190 21109189 21109303 21109190 21109189 21109303 114 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGT--GTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..:x.:..::.:.....x.x::..x.:....x...:....:x...:.:.::x:..--..::x.:..:......::x::::.x.x...:.:.:........x..:..:......::. 55M2D59M 70/114 61.4% 114/94230402 0.0% 2/114 1.8% 89124499 NA +3134 chr4 + 190214555 110233700 110233699 110233766 67 ATGTGTATGCATGTGTGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTATGTATGTGTATG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:.....xx...:.::.:x.:x::x..x::.:.....................:...::.:.... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 82908209 NA +3879 chr4 + 190214555 110233712 110233711 110233849 138 GTGTGTATGTATGTGTATGCAC-------GTGTGTGTGTATGTGTGTGTATGTAT--GTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.x:...:x:.:.:x....-------...::x....::x::..x.:.:.:..--....:...:.:x....x..:::::::..x..:.........:x..::.:......::::x.:....:..::.:..::x.......:.::. 22M7I26M2I90M 82/138 59.4% 147/94230402 0.0% 9/138 6.5% 105019537 85195018 +4652 chr4 + 190214555 110233722 110233721 110233834 113 ATGTGTATGCACGTGTGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACG----TGTGTATGTGTGTATGTATGTGTATGCACGTG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x..:x.::..:.......x.x....x.:....x...:....:x...:.:.::x:....::x...:::.:....:x..:.----.......:........x..:..:......::. 81M4I32M 77/113 68.1% 117/94230402 0.0% 4/113 3.5% 89124535 NA +3734 chr4 + 190214555 110233730 110233729 110233897 168 GCACGTGTGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCAC-GTGTGTATGTGTGTATGTATGTGTATGTGTGTATGTG-TATGTATATGTGTCTGTATGTGTATGTGT chr4 + 94230402 79265519 79265518 79265677 79265519 79265518 79265677 159 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-----------ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGT .:::.........:.........xx.....:.::..:........:.:::.::x::..:.x.....x::..-----------::::x.x...:.:x......-x..:x.x.x..x..:.::.x:..:..x.x....x...-.xx.:.:x...:.:.:..::.x....x.. 71M11D20M1I37M1I29M 97/157 61.8% 159/94230402 0.0% 13/157 8.3% 30968211 NA +4008 chr4 + 190214555 110233759 110233758 110233892 134 TGTGTATGCACGTGTGTAT--GTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTG--TATGTGTGTATGTGTATGTATATGTGTCTGTATGTGTA chr4 + 94230402 21109190 21109189 21109326 21109190 21109189 21109326 137 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTA ..:x...:..:......x.--...x.:....x...:....:x...:.:.::x:....::x.:..:..:.:.:.x.:..:x.x.....:.....:.:..--....::..:.:::.x:xx..:.-..x.....:x..... 19M2I77M2I22M1D15M 86/133 64.7% 137/94230402 0.0% 5/133 3.8% 89124569 NA +3154 chr4 + 190214555 110233776 110233775 110233842 67 ATGTGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx.....::::x..x..x.:x:.........:.........:..:....:::...:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 82908285 NA +4232 chr4 + 190214555 110233782 110233781 110233894 113 GTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGTGTGTATGTGTATGTATATGTGTCTGTATGTGTATG chr4 + 94230402 5214204 5214203 5214316 5214204 5214203 5214316 113 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...:.x..:..:x:...x:.::.::.x:......::.:.x....x.....:::::.x.::.......:..x..:........::.::x.:..:.:....:x..:.x:...:.. 113M 69/113 61.1% 113/94230402 0.0% 0/113 0.0% 105019578 85194977 +3733 chr4 + 190214555 110233802 110233801 110233947 146 GTGTGTATGTGTGTAT-------GTATGTGTATGCACGTGTGTATGTGTGTATGTATGTGTATGTGTGTATGTGTATGTATATGTGTCTGTATGTGTATGTGTGTGTGTCTGTGTGTGTATGTGTCTGCGTGTGTATGCGTATGTGTGTATGT chr4 + 94230402 5214181 5214180 5214321 5214181 5214180 5214321 141 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGT------------GTGTGCATGCAGATGTGTGCACAT .....x..:..x.:.:-------..:::x..:...x.:..x.:.:.::.x::...:..:.:.x....x.::::::.::.x..:....x..:..x..:.........:.:xx::....------------.....:....:x.......:.::. 16M7I94M12D24M 83/134 61.9% 141/94230402 0.0% 19/134 14.2% 105019621 85194934 +3972 chr4 + 190214555 110233889 110233888 110234024 136 TGTATGTGTGTGTGTCTGTGTGTGTATGTGTCTGCGTGTGTATGCGTATGTGTGTATGTGTATAAGTGTATATGTGTATGTGTATATGTGTATGTGTATGTGTGTAGATGTGTATGCATGTGTATATGTGTGTGTA chr4 + 94230402 21109194 21109193 21109326 21109194 21109193 21109326 133 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA---GTTTCTGTGGGTGTA .:..::.......x......x.:....x.:.x..:::x:::..::::x:....::x.:.:::..x..::x:...:x.x................x:....::..:.x.:.x.xx.:..---..x.x....x..... 118M3D15M 82/133 61.7% 133/94230402 0.0% 3/133 2.3% 89124695 NA +3640 chr4 + 190214555 110233906 110233905 110234018 113 GTGTGTGTATGTGTCTGCGTGTGTATGCGTATGTGTGTATGTGTATAAGTGTATATGTGTATGTGTATATGTGTATGTGTATGTGTGTAGATGTGTATGCATGTGTATATGTG chr4 + 94230402 5214204 5214203 5214316 5214204 5214203 5214316 113 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...::x..:..:x:x..x.:::.:..x...:....:.:.x....x.:x::::.:..x.:::...:.::..x..:......:..:.::x.x:.....:......::x..:.... 113M 66/113 58.4% 113/94230402 0.0% 0/113 0.0% 105019702 85194853 +3644 chr4 + 190214555 110233937 110233936 110234064 128 TGTGTGTATGTGTATAAGTGTATATGTGTATGTGTATATGTGTATGTGTATGTGTGTAGATGTGTATGCATGTGTATATGTGTGTGTATGTGTGTATGTTTATGCATGTGTATGTGTGTATGTTGTGC chr4 + 94230402 5214205 5214204 5214326 5214205 5214204 5214326 122 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTA--CGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTG----TGCATGCAGATGTGTGCACATCCTGC ..::x..:..:x:..::.:::::..x:..:....:::.x....x..:::.::::.x..--:..........x..:..:......:.:.x::....:..----......::x.......:.::.:x... 58M2D38M4D26M 74/122 60.7% 122/94230402 0.0% 6/122 4.9% 105019732 85194823 +3018 chr4 + 190214555 110234060 110234059 110234127 68 TGTGCATGTGTGTGTATATATGTATATGTGTGTATGTGTGTGTATGTGTATATGTGTATGTTTATGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x..:..:...:...x:...:.:.x...:.::...:........:.::..x...:.:::.:.:.:.. 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 23600136 NA +3479 chr4 + 190214555 110234157 110234156 110234241 85 TATATGTGTATGTGTGTATATATGTGTATGTGTGTATGTTTATGTGCGTGTGTGTGTATGTTGTGCATGTGTATGTGTGTATGTG chr4 + 94230402 74437250 74437249 74437334 74437250 74437249 74437334 85 TAAATGCAAACTTATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGTTGTACTTGTATGCATCTAGATATG ..x...::x.:x.:.x.........::..:.:..:.:...:..x..:..:.:....:.......:.x...:.:::.x.:x..:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 35796907 NA +3234 chr4 + 190214555 110238625 110238624 110238710 86 ATGCATGGTGGCATGCACTTGTGGTCCCAGCTCCTTGGGAGGCTGAGGCAGTAGGATAGCTTGAGCCCGGGAAGCTGAGACTGTAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..::....--.....x...:..:......x....::........x.xxxx.:.xx:.....:...:.:.:x:.x:.:...... 11M2D73M 57/84 67.9% 84/94230402 0.0% 2/84 2.4% 34205431 NA +3533 chr4 + 190214555 110242641 110242640 110242708 68 AGTGGCACACGCCTGTAATCTCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCCAGAGGC chr4 + 94230402 76033200 76033199 76033265 76033200 76033199 76033265 66 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .....::....--....:.::..........::...:....x.xx.x...x.:............:.. 11M2D55M 51/66 77.3% 66/94230402 0.0% 2/66 3.0% 34209441 NA +3297 chr4 + 190214555 110243700 110243699 110243774 75 GGCACACCTGTAGTCCTAGCTACTCTGGAGACTGAGGCAGGAGAATCGCCTGAACCCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x......:.:.......:x::..:.....x.xx.x...x.:.:.........:..x.xx:..:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 34210497 NA +3241 chr4 + 190214555 110284683 110284682 110284761 79 GTGGTAGGCACCTATAGTCCCAGCTACTCGAGAGGCAGAGGTGTGGGGATTGCTTGAACCCTGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--....x.:....:.........:..:....x...x:x..x.:.x::.........x.:..x.xx:..:..:.. 5M2D72M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 34251482 NA +3634 chr4 + 190214555 110285297 110285296 110285421 125 AAACTATGGAGAGTTCTGAAAAAATTAAAAATAGAGGCAAGGCATGGTGGCTTATTCCTCTAATCTCAGCACTTTGGAAGGCTGAGGCATGAGGATCACTTGAGCCCAGGAGTTTGAGGCTGTAG chr4 + 94230402 76033168 76033167 76033277 76033168 76033167 76033277 110 AAAGTATGTAATGTCATGAAAGGATGATACACAGTGGT---GCACG------------TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....x.:x..:x.....::..x.x.x.:..x..:---...:.------------.x..:.::....xx:...:.........x.x..x.:.x.......:.....:..:..x:........ 38M3D5M12D67M 77/110 70.0% 110/94230402 0.0% 15/110 13.6% 34252129 NA +3362 chr4 + 190214555 110294694 110294693 110294776 83 CGTGGTGGCGAACGCTTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:.x...--.:..:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 34261497 NA +3511 chr4 + 190214555 110312377 110312376 110312450 74 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATCACCTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........::........x:xx.x.:.x...:...:.....:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 34279173 NA +3458 chr4 + 190214555 110317604 110317603 110317682 79 GTGGCGCACGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....--....:.:........:..::........x.xx.x...x::......:....:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 34284403 NA +3461 chr4 + 190214555 110334238 110334237 110334329 92 GTGCACCTGTAATCCCAGCTACTCGGGAGACTGAGGCACAAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAAATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x....:.:.........:.::..:.....x.x::x...x.:........::.:..x:xx:..:..:..------..x..x...... 74M6D12M 60/86 69.8% 86/94230402 0.0% 6/86 7.0% 34301034 NA +3222 chr4 + 190214555 110347291 110347290 110347330 40 CTCTCTCTCTCTCTTTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::..........:........x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 35099242 NA +3345 chr4 + 190214555 110347293 110347292 110347331 39 CTCTCTCTCTCTTTCTCTCTCTCACACACACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..::........:.......................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 35099244 NA +3100 chr4 + 190214555 110347295 110347294 110347334 40 CTCTCTCTCTTTCTCTCTCTCACACACACACACACACGCA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::......:..........x...............:.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 35099246 NA +3094 chr4 + 190214555 110347297 110347296 110347331 35 CTCTCTCTTTCTCTCTCTCACACACACACACACAC chr4 + 94230402 12601304 12601303 12601338 12601304 12601303 12601338 35 CTCTCTCTCTCTCTCTCTCACACACGCACACACAC ........:................:......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 97745993 92468562 +3089 chr4 + 190214555 110373528 110373527 110373593 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.::........x.xx.x...xx:.x.......:.:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 34340327 NA +3406 chr4 + 190214555 110375307 110375306 110375385 79 GCGGTGCCAGTGTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGTCAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.....--::....:..:...........::........x:xx.x.:.x.......:..::.:..x.:x:.....:.. 7M2D70M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 34342106 NA +3256 chr4 + 190214555 110394463 110394462 110394508 46 TTCATGTATTGATTTATGAATTTACTTATAATTCTTGTCTTCCTAA chr4 + 94230402 65961380 65961379 65961425 65961380 65961379 65961425 46 TTCATGTGTTGACTTCTGAATTTACTGATAGTTCCTGTCTTCCTGA .......:....:..x..........x...:...:.........:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 44433083 NA +10841 chr4 + 190214555 110399764 110399763 110399981 218 CACCTGGGTCTAGTTCAGCTGGTGGATGAGCTGATTGATGCATTCACCCTGATAGCCAGGTGTGCCCATCTCCTTGAGGAAGCCCACTCTATTTTGGGTAGCATGATGGGCCACTGAGAGGTGGATAGGGCGCAAGAACCATGAGATCTCCTGGAAATGCTTCCCTGGGAGGGCAGTTTCATGAATGAGGTCTTCCAAACAAATGA-GCCAAACTTCCC chr4 + 94230402 56084778 56084777 56084994 56084778 56084777 56084994 217 CACCTG--TCTAGTTCAGCTGACGTATAAGCTGGTTGATTCCTTCACCTCTGCAGCCAGGCTTACCCATCTCCTTGAGGAAACCCACTTTATTATGTGCAGCATGGCGGGCCACTGACAGTTGAAAGGGCCACAAGAAGTCTGTGACATTTCTGAAATACTTCCCAGCTGAGTAGATTTCATGAATAAGGTCTTCCAGGCAAATAATACCAAAGTTCCC ......--.............::.x..:.....:.....x.x......::x::.......:x.:.................:......:....x..x.:......::..........x..x..:.x:..x.:......x:x..x..:x.:::x.....:......x.xx::.xx::..........:..........::.....:.-:.....x..... 6M2D198M1I12M 161/216 74.5% 217/94230402 0.0% 3/216 1.4% 54314986 NA +4156 chr4 + 190214555 110400089 110400088 110400231 143 ATCCCCAGGTCACATAAGGTTCCACTATACACAGCATTTTTAGGTTCTAGGGGGTGACTTTTACAAAGACAACACTAAAAATTTTCTTCAGGCGAAGTCTTGCAATGGTTCTCTGCAGCAGTAAACTCACGCTATCAGTCCTT chr4 + 94230402 56085597 56085596 56085739 56085597 56085596 56085739 143 ACCCCCAGGCCACATAAGGTTCTACGATCCGCAGCATCTTCAGCGATAATGGAGACAATTTAACGAATGTTCCAGTGAAAATTTTTCTCAGCCGCAGCAACTCGATCACTTTTCTTACCCTCATACTCACTCCTTTAATCCTT .:.......:............:..x..x.:......:..:..xxx:x.x..:.xx.x...x..:..x::xx..x.:........::....x..x..:xx:x.:..x::.:.::x:.x.xx:.x......x.:x.:.:..... 143M 88/143 61.5% 143/94230402 0.0% 0/143 0.0% 54314492 NA +4224 chr4 + 190214555 110400411 110400410 110400487 77 GCCTGCTTTGCCTGGGTGGCTTTGCGGGCTTGATAAGCCTTCCTCTTTTTCAGGAGATTTTCTAGAACCAAAGGAGT chr4 + 94230402 56087247 56087246 56087323 56087247 56087246 56087323 77 GCCTGCTTGGCCTGAGCGGCCTTGATGGCCTGGTAGGCCTTCCTCCTCTTCAGCAAGTTCTCCGGCACCAACGGGAT ........x.....:.:...:...xx...:..:..:.........:.:.....x.::..:..::.x.....x..::. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 54313164 NA +3105 chr4 + 190214555 110402262 110402261 110402316 55 CTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT chr4 + 94230402 1610701 1610700 1610755 1610701 1610700 1610755 55 CTCCCCTCCCTCCTCCCATCCCTCCTCTCGTTCCCTCCGTCCCCATCCCGTCCCT ..:..:...:....:..x...:.....:.x.:..:...x.:...x....x..... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 108791561 81422994 +3152 chr4 + 190214555 110416113 110416112 110416171 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATGGCTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:........::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 34382907 NA +3978 chr4 + 190214555 110417417 110417416 110417541 125 CATTTCATAATGGAAAGAAACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTCAAAAAGCAAATCTTGTATGTCATTATAGATGTCATACTGGAGAGAAACCATAGAAGTGTAATGAGTGT chr4 + 94230402 55848424 55848423 55848546 55848424 55848423 55848546 123 CATTTCATACAGGAAA--AGCCATACCAATGTTCTGAGTGTAACAAGGCTTTCAGTCAAAAACGAGGCCTCGATGAGCACATGAGAACCCACACCGGAGAGAAGCCGTTTCAGTGTGATGTGAGT .........xx.....--.:..x...xx....xx...:...::.....:...:.........xx.:::..:.xxx:x..:xxx...xx:..:..:........:..:.xxx.....:...x.x.. 16M2D107M 82/123 66.7% 123/94230402 0.0% 2/123 1.6% 54568993 NA +3627 chr4 + 190214555 110419865 110419864 110419943 79 TTTTCTCTGACTTCTGAGGTGTGTGTGTGTGTATGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACGGAGTTT chr4 + 94230402 62522691 62522690 62522769 62522691 62522690 62522769 79 TTTCACTTGACTTGTTGTGGGTGTTTGTGTATGTGTTGGTTTTTTTTTTTTGTTGTTTTGTTTATTTTTTAAGGGATTT ...:x::......x.x:x.x....x.....:.:...xx.............x..x....x...x.......x..::... 79M 58/79 73.4% 79/94230402 0.0% 0/79 0.0% 47897174 NA +3000 chr4 + 190214555 110419868 110419867 110419934 67 TCTCTGACTTCTGAGGTGTGTGTGTGTGTATGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 41434307 41434306 41434373 41434307 41434306 41434373 67 TCTCAGAATGTCTGGGTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCT ....x..x.x::x:...:.x.........:.:.....x....:.:.:.......x..x..x...::. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 68985561 NA +3306 chr4 + 190214555 110419886 110419885 110419934 49 TGTGTGTGTGTATGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 41434327 41434326 41434375 41434327 41434326 41434375 49 TGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCTTT ......................:.:.:.......x..x..x...::... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 68985559 NA +3571 chr4 + 190214555 110425304 110425303 110425376 73 TGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:......:....::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 34392099 NA +3135 chr4 + 190214555 110441085 110441084 110441171 87 CTCCATCTCAAAAAACAAACAAACAAACAAAAAACCAGAAAACTTTCATCATATGAGGTTTTCT------ATTCATTGAGGCTTTATAAACTG chr4 + 94230402 67348883 67348882 67348975 67348883 67348882 67348975 93 CTCCACTTAAAAAAACAAATAAACAAACAAAAAACCAGACCAGGTTTATCTCCAAAAAGTTTCTTGAGAAGTTTTTCATGTCCCCATAAACTG .....::.x..........:...................xx.xx..:...x:xx:.::x.....------:..:x.::x.x.:::........ 64M6I23M 60/87 69.0% 93/94230402 0.0% 6/87 6.9% 43092202 NA +3361 chr4 + 190214555 110444946 110444945 110445017 72 GCACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCTCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::...:....x.xx.x...x.x........::.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 34411740 NA +3269 chr4 + 190214555 110449541 110449540 110449612 72 GCACCTATAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATCACTTGTACCCAGGAGGTGGAAGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:..:.:........x..::........x.xx.x...x......x......:..x.xx::.:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 34416335 NA +3473 chr4 + 190214555 110458048 110458047 110458113 66 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--....:.:...........::........x.xx.x...x::.........:.:.. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 34424847 NA +3277 chr4 + 190214555 110491672 110491671 110491742 71 TTTTTTAAAAATATCAAGACGACTAGTTCAATAGTT--TTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 14223154 14223153 14223224 14223154 14223153 14223224 71 TTTCTTGAAAATATTAAGAATACTGACTT--TAATTAATTCTTTCTTTTCTCTTTTTTTTTTTTTTTCTAAAA ...:..:.......:....xx...:::.:--..:..--..........::.:...............:.:.:. 29M2D5M2I35M 53/69 76.8% 71/94230402 0.0% 4/69 5.8% 96268518 93946037 +3976 chr4 + 190214555 110534430 110534429 110534548 119 CCTAGTATTATTACTTTATATTTT---AAACAAAATCATTGTTATTAAGCTTCATATGTTCTCTCTTTTCGTTGTTTCTTTTTTTTTTTTTTTTTTTTGGGACAGAGTTTTGTTCTTGTTGC chr4 + 94230402 6141903 6141902 6142015 6141903 6141902 6142015 113 CTTGATATTATTCCCCTGTATCTTGGAAAAAAAAATCCTTGTTAGTAAGTATAACAGTTTTCTCCTGTTCATTTTTCATTTCTTTTTTTTTTTTTT--------GAGTTTT-CTCCTGTTAC .:.::.......x.::.:...:..---...x......x......x....:x.x.:.xx..::::..x...:..x..:x...:..............--------.......-:..:....:. 24M3I69M8D7M1D10M 80/110 72.7% 113/94230402 0.0% 12/110 10.9% 104392527 85822028 +3023 chr4 + 190214555 110548111 110548110 110548184 74 AAAGTCTGTGGTTTTTAATTAACTGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTTCTCAGAGCTCAACT chr4 + 94230402 86769255 86769254 86769328 86769255 86769254 86769328 74 AAGCTTTGTAGACCTTACTGAATTAAAGCTTCTTTCCTTTTTTTTTTTTTTTTTCTCTTCCTTAAAGCATAGCT ..:x.:...:.x::...x.x..:.:x::x..:...::.................x....:..:.:...x:.:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 23778856 NA +3693 chr4 + 190214555 110576934 110576933 110577036 103 AATTTTAAAAAATAGCCAGGTATGGTGGTGCGTGCCTGTGGTTCCAGCTACTTGGGAGGCTGAGACGAGAGGATTGCTTGAGTCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033177 76033176 76033277 76033177 76033176 76033277 101 AATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:.x:...x:::x.x::.::.......::.--...:..............::........x.xx.x.:.x::.....::....:..x.:x:.....:.. 34M2D67M 66/101 65.3% 101/94230402 0.0% 2/101 2.0% 34543757 NA +3067 chr4 + 190214555 110584550 110584549 110584608 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 34551344 NA +3419 chr4 + 190214555 110584676 110584675 110584721 46 CTCAAAAAAATAAAAATAAAATAAAATAAATAAATAAATAAATAAA chr4 + 94230402 73948130 73948129 73948175 73948130 73948129 73948175 46 CTCAAAAAAGTAAAAATAAAATCAATCAAATAAATAAATAGATAAA .........:............x..x:.............:..... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 36636546 NA +3419 chr4 + 190214555 110584676 110584675 110584721 46 CTCAAAAAAATAAAAATAAAATAAAATAAATAAATAAATAAATAAA chr4 + 94230402 73945757 73945756 73945802 73945757 73945756 73945802 46 CTCAAAAAAGTAAAAATAAAATCAATCAAATAAATAAATAGATAAA .........:............x..x:.............:..... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 36638919 NA +3108 chr4 + 190214555 110594017 110594016 110594092 76 AAGAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548762 35548761 35548837 35548762 35548761 35548837 76 AGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA .:.x..:........x.....x.:.......:..x....x.......:xxxx.....x.x:x::....:x...x.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 75045255 NA +3438 chr4 + 190214555 110604806 110604805 110604923 118 ATGTATATATATGTATATATACACAAACATACATACGTATATATGTGTATATTTTTGTATTTATATGTGTATATATATAAAGGAGGTATGTGTATACATATGTGTGTGTGTATATATC chr4 + 94230402 76376858 76376857 76376973 76376858 76376857 76376973 116 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACA-GAGT-TACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACATC ...:...:x.x.x..:....:..x...:.:.::..:.:...:.-.x..-..:..x.....x:.......:.....x.:.:.x:::.x.x:...::x:x.x......:x...x..:... 43M1D4M1D69M 75/116 64.7% 116/94230402 0.0% 2/116 1.7% 34227948 NA +3285 chr4 + 190214555 110605668 110605667 110605733 66 GTGGTACATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:..:.--....:.:.......:...::........x.x..x...x::........::.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 34572467 NA +3109 chr4 + 190214555 110610124 110610123 110610168 45 TATATATATATATATATATATAGTGTGTGTATATATATATACAGA chr4 + 94230402 22934832 22934831 22934876 22934832 22934831 22934876 45 TATATACATACATATATATATAGTGTGTGTGTGCATATAGAGAGA ......:...:...................:.::.....x.x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 87675292 NA +3021 chr4 + 190214555 110652145 110652144 110652180 36 TTTGTTTTTTGGGGTTTTTTTTTGTTTGTTTGTTTT chr4 + 94230402 63132017 63132016 63132052 63132017 63132016 63132052 36 TCTGTTTTTTGGGGGTTTTTTTTGTTTGTTTGTTTT .:............x..................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 47520128 NA +3081 chr4 + 190214555 110654136 110654135 110654185 50 TTATGCTGGGTTTTTTTCTTCTTTCCCTCCTCCTTTTTTTTCTTTTTTGC chr4 + 94230402 37658049 37658048 37658098 37658049 37658048 37658098 50 TTACACCAGGTTTTTTTCTTCTTCCCCCCCCCCTTTTTTTTTTCCTCCAC ...::.::...............:...:..:..........:.::.:::. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 72996087 NA +3105 chr4 + 190214555 110680451 110680450 110680503 53 AGGCACATAGAGGAAACAGCAGATTCAGAGATAAAAAGAAATGAGAAGTTTAG chr4 + 94230402 32826147 32826146 32826199 32826147 32826146 32826199 53 AGGCACACAGAGGAAACAGCAGATATAGATGGGAAAAAAAATAAAAGGTCCAG .......:................x:...x:x:....:....:.:.:..::.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 77854304 NA +3830 chr4 + 190214555 110686765 110686764 110686900 136 TATTCCGAGTTTCATCCTGAAGCAAATTTCTATAGCTGAGTTATAAGTCCCTGAAAAATGAGGTTTATGATGAAAATGTTGAAAGACCCTCAACTTTAGGA---CAAG---GCACAACTATAATTTTACAGGCATTAGGCAC chr4 + 94230402 9220590 9220589 9220731 9220590 9220589 9220731 142 TATGACAAGGCTCTGCCCAGAGTGAATTTTTATGCTTGAGTTATAAACCCTTGAAAAATGGGGATCCTAATGCAAAAGCTGACACAGCTTTAACTAAAGCAGCTCAAGTAAGTGCTGCTATAATTATTTGCTCATTAATTAC ...xx.:..x:..xx..:::..::.....:...:x:..........::..:.........:..x.:x.:...x...x.:...x.x.x.:.:....xx..x.---....---.::.x:........x.x::xx.....:x:.. 101M3I4M3I31M 88/136 64.7% 142/94230402 0.0% 6/136 4.4% 101466175 88748380 +10170 chr4 + 190214555 110729219 110729218 110729522 304 TATTCTGTTAT-----TTTTTTGACTAGAAAACCATATACTTTAAGAAGGATT---------TAATAACTTGGTCCC-TGGGTGTCAATCAATAAAGCACGTGAATAACCAGTGCAAAGTGGTCACTCGGCTGCCCAAGGGGAGGTCATCCAAGAATGAAATCAGTGTAACA--ACAGCTGAATTGCATCCTTCATCAAATGCATGTAAAACAGACCAGAAAGACATCAATTCCCAATGCTGGTATGGGTGGTCTTTCTACTGCATGTATAATTTCCAATTTAACAAAGGTTAATACCATGTTGTAATTTGAAATGTCAAA chr4 + 94230402 59329526 59329525 59329829 59329526 59329525 59329829 304 TATTCTGTAAGAGATATTTCTCCATTAGAAAATCCTGATACTTAGAATGGATTCAGAGGGACTAATAAATTGGTCCAGTAGGTGTTAATCAATAATATAAATGAATAACCAATGAAAAGCTGTCACTAGTATGCCAAAGGGGAAATCATCCAAGAATGAAATCAGTGCAATAATACAAGCACGTTGTATCCATTAACAAATACATGTAAAGCATACTGGATTGACATCAATTCCCAGTACAAAAGCATGTGCTCTTTACACTGC-----------------TCAAAATAATTAATTTTATGTGGTGTTTTTCAAAGTGAAA ........x.x-----...:.:x.:.......:.x.:xxx:...::.x.....---------......x.......x-.:.....:.........x::.x:..........:..x....:x......x.xx....x.......::......................:..:.--...:x::x:...:....x.:.x.....:........:..x..::..xx..............:.:.x::x:::x...x.....x:.....-----------------.x.x..x::.....x::....x..:x...xx..x..x... 11M5I37M9I15M1I94M2I90M17D40M 205/287 71.4% 304/94230402 0.0% 34/287 11.8% 51399693 NA +3131 chr4 + 190214555 110729655 110729654 110729701 47 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x..........x...........x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 103872045 86342510 +3051 chr4 + 190214555 110729657 110729656 110729713 57 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATCACTAGTTT chr4 + 94230402 6857610 6857609 6857666 6857610 6857609 6857666 57 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTT .......::..:...::....x:.........x...........x.:xx.x..:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 103872047 86342508 +3066 chr4 + 190214555 110827223 110827222 110827279 57 TTTTTTTTTTTTTTTTTTTTTTTTTTGCCATGGTAGAACAAATGCATTTTATTTTAT chr4 + 94230402 5357502 5357501 5357558 5357502 5357501 5357558 57 TTTTTACTTTCTTTTTTTTTTTTTTTCCCAAGAGAAAACAATTGCTTGTTCTTTTAT .....x:...:...............x...x.:x.:.....x...x.x..x...... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 105469721 84744834 +3182 chr4 + 190214555 110827224 110827223 110827274 51 TTTTTTTTTTTTTTTTTTTTTTTTTGCCATGGTAGAACAAATGCATTTTAT chr4 + 94230402 31601276 31601275 31601326 31601276 31601275 31601326 51 TTTTTTTTTTTTTTTGCTTTGTTTTGTCATGGTGGAAAAAAAGCAGTTTGT ...............x:...x.....:......:...x...x...x...:. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 79225948 NA +3215 chr4 + 190214555 110860601 110860600 110860672 72 ACATATATATGTATATACACATACATGCACATGCACACATACATACATATGTTCATAAAGTATGTAGAAAGA chr4 + 94230402 44513803 44513802 44513870 44513803 44513802 44513870 68 ACATATCTAGGTGCATACTCATTCATGCACATGCACAC--ACACACGTATGTGCGTGGAGCC--TAGAAAGA ......x..x..::....x...x...............--...:..:.....x.:.::..:x--........ 38M2D22M2D8M 54/68 79.4% 68/94230402 0.0% 4/68 5.9% 66346798 NA +3104 chr4 + 190214555 110881289 110881288 110881346 58 TCATTTTCTCAAAAGACCTCACATTGATCTCTCTCTCTCTTTCTTTTTTTTTTTGTTT chr4 + 94230402 77909733 77909732 77909790 77909733 77909732 77909790 58 TCAACTTTTCAAAAAATATAGCATTATTGTCTCTCTCTCTCTTTTTTTTTTTTTCTTT ...x:..:......:.:x.x:....:x.x...........:.:...........x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 32971556 NA +3044 chr4 + 190214555 110881311 110881310 110881352 42 ATTGATCTCTCTCTCTCTTTCTTTTTTTTTTTGTTTTTGAGA chr4 + 94230402 17384408 17384407 17384449 17384408 17384407 17384449 42 ATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAGA ....:.............:.............x....xx... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 93496903 NA +3664 chr4 + 190214555 110909133 110909132 110909203 71 GAGTTTGGGCAATTTACTCAATGTCTTCGTGCCTCAGTTACCTTATTTGTAAAATGGAGATAATAGTAGCT chr4 + 94230402 83501141 83501140 83501211 83501141 83501140 83501211 71 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATT ..x.:.......x.....:..:x.x.x:...........x:.::.::............x.:......::. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 27407992 NA +3020 chr4 + 190214555 110916221 110916220 110916276 56 TCTGATATATGTTTT--TTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTTTTTTTAAAC chr4 + 94230402 25576007 25576006 25576064 25576007 25576006 25576064 58 TCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAAAC ....:.x.x..x...--.........x...x..........xx....:.......... 15M2I41M 47/56 83.9% 58/94230402 0.0% 2/56 3.6% 85340214 NA +3216 chr4 + 190214555 110916223 110916222 110916278 56 TGATATATGTTTTTTGTTTGTTTGTTTGTTTTG-TTTTTGTTTTTTTTTTTAAACTG chr4 + 94230402 28946003 28946002 28946059 28946003 28946002 28946059 57 TAAGATGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTTGGACTG .:.x..:x......................xx.-.....x...........::.... 33M1I23M 47/56 83.9% 57/94230402 0.0% 1/56 1.8% 81970220 NA +3209 chr4 + 190214555 110916231 110916230 110916297 67 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTTTTTTTAAACTGTGGTTTCTCTCTTGAGAGT chr4 + 94230402 80057861 80057860 80057923 80057861 80057860 80057923 63 GTTTTTTGTTTGTTTGTTTGTTTTATTATTATTATTTTCTTCAGATT----TTTTTATTGTAAGAAT ........................:..x..:..x....:..:.:.:.----...:.x.:x.:...:. 47M4D16M 49/63 77.8% 63/94230402 0.0% 4/63 6.3% 30858370 NA +3368 chr4 + 190214555 110916231 110916230 110916269 39 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTTTT chr4 + 94230402 56840383 56840382 56840421 56840383 56840382 56840421 39 GTTTTTTGTTTGTTTGTTTGTTTTGTTTCTGTTTTTCTT ............................:.......:.. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 54075848 NA +3445 chr4 + 190214555 110932334 110932333 110932434 101 CCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:x.x......:x...x::x::.::x.......xx.::....:...:....:..x:..xx....x.::..x:x.:.....x.....::..::.:...... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% 27605406 NA +3303 chr4 + 190214555 110932338 110932337 110932438 101 CCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:x.x......:x...x::x::.:.x.......xx.::....:..:.....:..x.::xx:...x.::..x:x.:.....x.....::..::.:...... 101M 62/101 61.4% 101/94230402 0.0% 0/101 0.0% 27605410 NA +3184 chr4 + 190214555 110932355 110932354 110932438 84 CTTCCTTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...::.::......x:::.:x....:.:....:..:.xx::x..x.:.........:...::...x.....x..xx:.x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 53560329 NA +3437 chr4 + 190214555 110932359 110932358 110932442 84 CTTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...:..::......x:::.:x.....::....:...:xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 53560333 NA +3933 chr4 + 190214555 110932360 110932359 110932518 159 TTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCT------------TTCTTTCTTTCTTTCCTTCTCTCTCTCTTTCTTTCTCTTTCTTCTC-TTTCTCTTATATA chr4 + 94230402 50176268 50176267 50176431 50176268 50176267 50176431 164 TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATT---------GTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTTACACA ....x...:x..x.::.....:..::..:.x..:x.:.x:.:..x.x..---------x........-......x.x.::x.:...x.:............------------.:.::x:......x:..:..:::.:.......::::.x......x.-.x..:....:.:. 49M9D9M1I33M12I46M1I13M 100/150 66.7% 164/94230402 0.0% 23/150 15.3% 60756092 NA +3190 chr4 + 190214555 110932363 110932362 110932463 101 TTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCT chr4 + 94230402 93060601 93060600 93060701 93060601 93060600 93060701 101 TCTCTTTTCTATTGCTTCCCTCTGGCTACCTTTTCTTGTTTTACCCCTTCCTTCCTCATGGATCTGAGTCCCCTTTTTCTTCCTTTTCTGCCTTTTTTTCT .:.....::.x:.x.:.:.....xx..x:...:....x:...x:::...:...:..:x:xxx::.xxx.:.::.:......:.......x:....:..... 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% 17871762 NA +3663 chr4 + 190214555 110932373 110932372 110932512 140 CCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTC---TTTCTTTCTTTCTTTCTTTCTTTCCTTC----TCTCTCTCTTTCTTTCTCTTTCTTCTCTTTCTCT chr4 + 94230402 19215407 19215406 19215553 19215407 19215406 19215553 147 CCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCT ..::..:...:.:.:.:..:..:.:...:..xx..::xx:xx......x..::...x......xxx....x.x..:..---:......:.x.:.:.:..x.:x.....:----::.....:xx::...:...x:...x.x...:... 78M3I28M4I34M 87/140 62.1% 147/94230402 0.0% 7/140 5.0% 91716966 NA +3551 chr4 + 190214555 110932384 110932383 110932499 116 CTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTCTCTCTCTTTCTTTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x.::..:::.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....---------....x....:.:x.xx......--...::...::.:...:....:....:.x... 61M9I22M2D31M 75/114 65.8% 123/94230402 0.0% 11/114 9.6% 47235267 NA +3197 chr4 + 190214555 110975800 110975799 110975865 66 CGTGGTGGTGCC--TGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.......x--....:.:...........::........x.xx.x...x::.........:.:.. 12M2I54M 49/66 74.2% 68/94230402 0.0% 2/66 3.0% 34942603 NA +3108 chr4 + 190214555 111020910 111020909 111020959 50 AAAGAGAAAAGTAAAACAAGTTACTTTTTAAAAATTTAAAGTAGAGAAGG chr4 + 94230402 82570876 82570875 82570925 82570876 82570875 82570925 50 AAAAAAAAAAATAAAACAAGCTACCATTTTTAAATTTAAAATAAAGAAGG ...:.:....:.........:...:x...xx.........:..:...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 28450034 NA +3019 chr4 + 190214555 111065352 111065351 111065395 44 TTTTTTTTTTTTTTTTTTTTTTACCACTGGGAACATAGGGCCAA chr4 + 94230402 28127676 28127675 28127719 28127676 28127675 28127719 44 TTTTCTTTTTTTTTTTTTTTTTCCCACTGGGAAGCCAGGTCCAA ....:.................x..........xx:...x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 82937676 NA +3088 chr4 + 190214555 111070712 111070711 111070782 71 TATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTGCGTTTGTGTGTATATAAACATATACATATGTAC chr4 + 94230402 85834533 85834532 85834603 85834533 85834532 85834603 71 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCAC ...x.:.x.....x.................:..xx..::xx::.:::...:....:.:..::x....:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 25236179 NA +3448 chr4 + 190214555 111092177 111092176 111092250 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCAGCAGGCGGAGGTTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x::...........x..x:xx:..:...:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 35058973 NA +3553 chr4 + 190214555 111093247 111093246 111093331 85 TGCGCCTGTAGTCCTAGCTACTTGGAAGGCTGAGGTGGGAGGCTCACTTGAGCTCAGGAAGTTGAAGCTGTAGTGAGCCATGATG chr4 + 94230402 76033205 76033204 76033286 76033205 76033204 76033286 82 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATG ...:.x......:.:.........:.........x:xx.x.:xx.......:.:...:.:x..x::.......---:x....... 73M3D9M 59/82 72.0% 82/94230402 0.0% 3/82 3.7% 35060042 NA +3045 chr4 + 190214555 111104190 111104189 111104261 72 TACATTTTCCTTTTCTTTTTTTCTTTTGTTTTTTTTTTTTGTTTGTTTGTTTTCTTTTTTCTTTTTTTTTTT chr4 + 94230402 72471343 72471342 72471414 72471343 72471342 72471414 72 TATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTT ..:x.....::..x.xxx.......:..xx...:..x.....:.x::.x:...:.:.............:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 38632847 NA +3179 chr4 + 190214555 111104190 111104189 111104260 71 TACATTTTCCTTTTCTTTTTTTCTTTTGTTTTTTTTTTTTGTTTGTTTGTTTTCTTTTTTCTTTTTTTTTT chr4 + 94230402 41131019 41131018 41131089 41131019 41131018 41131089 71 TACATTTCCTCATATCTCTTCCCGTTCTACTTCTTTTTTTGTGTGTTTGTTTTCTTTTGATGTTTTTTTTT .......:.::x.x::.:..::.x..:xx:..:.........x...............xx:x......... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 69973171 NA +3111 chr4 + 190214555 111104212 111104211 111104252 41 CTTTTGTTTTTTTTTTTTGTTTGTTTGTTTTCTTTTTTCTT chr4 + 94230402 12568753 12568752 12568793 12568753 12568752 12568793 41 CTTCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTT ...:..........x................x......:.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 98535459 91679096 +3014 chr4 + 190214555 111197442 111197441 111197497 56 TGAAGAAAATGTGAGTATATATACATACATATATACACACACACATATACATACAT chr4 + 94230402 4409067 4409066 4409122 4409067 4409066 4409122 56 TAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACAT .:....:.x..x.:x.:..:...:...:...............x.x.:...:.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 106788375 83426180 +3201 chr4 + 190214555 111197468 111197467 111197519 52 ACATATATACACACACACATATACATACATATATACACACACACACACACAC chr4 + 94230402 23247722 23247721 23247773 23247722 23247721 23247773 52 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACAC .::.:.:..::.........x..::x......:........:.......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 87949746 NA +3012 chr4 + 190214555 111205407 111205406 111205442 36 ATGTTTTATATATATATATACACACACACACACACA chr4 + 94230402 30834201 30834200 30834236 30834201 30834200 30834236 36 ATGTATTATATATATATATATACACACACACACACA ....x...............:............... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 80371206 NA +3049 chr4 + 190214555 111205434 111205433 111205498 65 ACACACACACACACACACACACATATACACACACACGTATATACACCCACATATATATGTATATT chr4 + 94230402 74526066 74526065 74526130 74526066 74526065 74526130 65 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATT ....xx.x.:x............:..:x...:....:x.....:..x:.:....:...x..x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 36679368 NA +3970 chr4 + 190214555 111205774 111205773 111205900 127 TTTCTCTCTCTCCCTTTCC---TTCTTTCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTCTTTGTTTTTCTTTCTTTTCTTTCTCTCTTTCTTTTTCTCTCATTTTCTCTTTCTCTCATTCTTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAG--------CCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x.::......:..:.x---..:.:.....:....:.:x..:....x....xx.....x.::.xx.--------:....x....:..x.xx.....:....:.x.:..:.......::.x..:.x... 19M3I46M8D54M 82/119 68.9% 122/94230402 0.0% 11/119 9.2% 47508656 NA +3007 chr4 + 190214555 111205782 111205781 111205821 40 TCTCCCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTCTTTT chr4 + 94230402 37318514 37318513 37318553 37318514 37318513 37318553 40 TTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTCT .:......:.........:...........::......:. 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% 73887268 NA +3064 chr4 + 190214555 111205782 111205781 111205828 47 TCTCCCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTCTTTTTCTTTCT chr4 + 94230402 87791846 87791845 87791892 87791846 87791845 87791892 47 TCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTT .....x.:...:..:...:.:....:...:....:..........:. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 23413936 NA +3070 chr4 + 190214555 111205821 111205820 111205885 65 TTCTTTCTTTCTTCTTTGTTTTTCTTTCTTTTCTTTCTCTCTTTCTTTTTCTCTCATTTTCTCTT chr4 + 94230402 94003860 94003859 94003924 94003860 94003859 94003924 65 TTCTCTTTTTCCTCTCTGTTTTAATTACTGTTTTTTTTTTTTCTCTCTCTCTCACATTTGTTATT ....:.:....:...:......xx..x..x..:...:.:.:.:...:.:....x.....x:.x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 17201961 NA +3335 chr4 + 190214555 111205825 111205824 111205900 76 TTCTTTCTTCTTTG-----TTTTTCTTTCTTTTCTTTCTCTCTTTCTTTTTCTCTCATTTTCTCTTTCTCTCATTCTTTTT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ......:..x....-----..:x...x.x........:x...x.:.x......:..x......:...:..::.x.....:. 14M5I62M 57/76 75.0% 81/94230402 0.0% 5/76 6.6% 87229324 NA +3046 chr4 + 190214555 111236143 111236142 111236206 64 TTTTACTCAATTTGCCTCAGAGAATTTTGCTGGCAAAAAAAAAAAAATAAAAATAAGAAAAAAA chr4 + 94230402 28999050 28999049 28999113 28999050 28999049 28999113 64 TTTTGCTCCCTCTGTTGAAGGGAATTTTGGTGGAGAAATAAAAAAGAAAAATGTAAGAAAAAAA ....:...xx.:..::xx..:........x...x:...x......:.x...x:........... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 82237093 NA +3547 chr4 + 190214555 111245682 111245681 111245751 70 CATGGTGGTGGGCGCCTGTAGTCCCAGCAACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......x:..--......:.....x.....::........x.xx.x...x.........:...:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 35212485 NA +3114 chr4 + 190214555 111246158 111246157 111246213 56 AACTGTGATTATATATATATATATATATAGATATATATATATATATATATATATAT chr4 + 94230402 55824548 55824547 55824603 55824548 55824547 55824603 56 AACTGTGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATAT ................:x.........:.x.....::.:xx...x.....:x.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 55421610 NA +3200 chr4 + 190214555 111253924 111253923 111254051 128 ATATATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATAATGGGGATAATATTACTTACCTGGTTTTTTTGTTGTTGTTGTTATATAAGATAATGC chr4 + 94230402 9250989 9250988 9251116 9250989 9250988 9251116 128 ATGCATGCCTATTTGTATCTACACCTTTATATTTCACTCTACACATGCTTGCACACAGACACATACACATAAATATTATAATTATCTATGGCACACTTTTTAAGTATTTCAGCTATATAAGGTAAAGC ..::..:.x...x.:...x..:.:x.x.....x.xxx.x..:.:..:.x::......x.....:........xx:xx.....xx.x:x.:x.xx::.....x:x.:..x:x.:........:...x.. 128M 78/128 60.9% 128/94230402 0.0% 0/128 0.0% 102002935 88211620 +3043 chr4 + 190214555 111253941 111253940 111253998 58 TATATATATATATATATATATATATATATACACACACACACACACACACACATAATGG chr4 + 94230402 53944239 53944238 53944296 53944239 53944238 53944296 58 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACAATGG ......:x...:.x.x..x..x.....::.................:xx:..:..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 57309702 NA +3036 chr4 + 190214555 111253951 111253950 111253990 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 106844869 83369686 +3016 chr4 + 190214555 111260981 111260980 111261066 86 AACGTTTATTAGAAACTGATAGG-TAAGGGTTACTAATACTCCCTCTG------TT--TTTTTTTTTGTTTGTTTGTTTGTTTTAGTGTTTTTTT chr4 + 94230402 62525962 62525961 62526056 62525962 62525961 62526056 95 AGTGTTAATTAGTAATTAAAAATCTTAGCTTCATTAGTACCTACTTTGAAATAGTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTAGTTTTGTTTT .::...x.....x..:.:.x.:x-.x..xx.:.:..:...::x..:..------..--.............................x..x.... 23M1I24M6I2M2I37M 65/86 75.6% 95/94230402 0.0% 9/86 10.5% 48735019 NA +3217 chr4 + 190214555 111286099 111286098 111286164 66 AGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCGCGCGCACAGAAAAAAGTATTT chr4 + 94230402 79265515 79265514 79265580 79265515 79265514 79265580 66 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .:.x.............::........xx...:.:.::::..:..:.:.....x:x...x:..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 32020584 NA +26097 chr4 + 190214555 111296387 111296386 111297178 792 AGAGAAAAATATCCGCTCAAACAGGGCTCTAGATAATCACTCAATTGGACAA-AATAAATTATAACTTCATTATACCATTAAATCCTCTAACTTACTTAGGACTTAACCCTTTCTATCATGTGCCACTATGAGATTCTTCTTCAAGAAGAATCATTACCTTGTTCAAACCATTTGTCTTTCCATTACTTATGATTACGCAGAGGTGCCCTTTCTCTGCCCTTTTATTTCCAGTAAGTCACCTATAATTACCAAAAAGTTTCCTGTCTGCAACATCACTGCATCACTAAAAGCAATAGACCTTTATCAGGCTATCTAGTTAATCTTAGCCATAATGACAGAACTTGTAATATTATAAAATTAAATCCATTTTATAGCTCATTTTATAGCTCCAGGGTTAGTTGTAACAATGGTAGCTCCTGTGTGATTAGATTAACACATCTTTTACTAAACATGTAAAACATTTGTTCAGCTATGTTTTGCTAGTGATTTTAATATTCTTCACCACTTCAATCAATCACTAAGTCATCTACAATAACTCAAATGGAAATAACAAGAAATACTAGTTAT----------ATTTGAACTATGTCTTCTCTGAA-------------------------TTTTGCTGGATACACATGGATATATACACTCACATAATAAAGTCTTCATTTAGTTTTAATTCATTTCACAT-TAGTCTGCCAAAAGATGT-CTTCATATTGATTTATTGATA-CTTAATGACTAAGAGTTTTA----GTTTTTCCCTTTTTATTGGCTTTTCAGTAAAAGGAAACAGCTAGCAGAAACACTATCCCAAAGGAAAAGGAA chr4 + 94230402 59092972 59092971 59093776 59092972 59092971 59093776 805 AGAGAAATCTCGCAGACGATGCAATGTTCTAGCTTATCACACAGCTGGATAGCAGTACATTATAACTTTATCTCAGCATTAAAGCTGCTAAGTTACTTTGGATGTAACCCTTTCTGTAACCTGTCCCCATTAAATTATCT---------AGCTACTACCTTGCTTAAAGCACTCATTTCTCTATTGCTCATAATTATTTCAACATGCTCCCTTTTTGCCCTTTTATTTCCACTAAGACAGTTATAATTACAAAGCCGTTTCTTGTCTTAGACATTCTAGCATCTCTAAGAGCAGTAGACCTCCATCAGGCTGTGTCGTTAATCTTCTCTATAATGACAGAACTTGTAATATTCTGGAATAAAATCCATTTTACAGCTCGTTTTACAGCTCCAGGGTTAGTTGTAACACTGACAGCTCCTGTGAGATGAGATTAATACATCTTTTACAAAACATGTACAGCATTTGTGATGATAAGGTTTCCTCGTAGTTTTAATATCCTCTACTATT-------ACTTTTTTGATAGCTACAGTACTGTACATAGTGACACCAA-AAATATTGATTTTCATGCCAGTGCCTAAGAAGACTTCTTCCCTGCACACTTTTTTTACTTCTCTTTTTTTTTTTTCCTAAATACTCAAAGACTTAAAAAGT--CATTATGAAGGTTTC----AGTTTTAATTCTTCTTAAATCTGGTCTACAAGAAGAGATGCCTCTTATAGATTTCCTGACAGCTTAATGATCTGGACTTTTAAAATGTTTTTTC---TTTATTAGTCATGCTGGAATGGGAA----CCAACCTCAGCGCTGTTTCTAAGGGAGAAAAA .......xx.xx.x.x:x.x:..:x.:.....x.x.....x..::....:.:-.:..x..........:..:x:.x.......x.:x....x......x...:x...........:.x.:x..:.x.:..x.:...x.::---------.:::.:.......:.:...x..:.::.:.:..:...:..:..:....:x:x:.x:...:.::.:.:................x....x..x:.........x..:xx.....:.....xx:....:x:x.....x....:....:.......::........:.x.x.........xx.:.......................x.::...x............:.....:.....:......................x..::..........x...x.......:...........x.........x.:.......xxx.x..x.x...x..x..::.........:..::..:.:.-------.::x:.xx.x:.x.....:..x:x:.x..:.x:.:.x...-.....:.::..x.----------x:.x::.xx.:x.....:...x.-------------------------....x..::....x..x:..:x..x.x.x.--...x..:...x:...----...........x.:.:.x..-.:....:.x.:....x:.-.:..x...x.....x:...:.-........::x:..x.....----......:.---......:.::x.x.x.x..x:....----.:.:.xxx.:.:..:.::.x....:.:.::.. 52M1I87M9D358M7D40M1D13M10I23M25I30M2D15M4D20M1I18M1I21M1I20M4I8M3D25M4D32M 534/762 70.1% 805/94230402 0.0% 73/762 9.6% 52203415 NA +3022 chr4 + 190214555 111316627 111316626 111316675 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 58536165 NA +3419 chr4 + 190214555 111362227 111362226 111362314 88 TAAGTGCTTTT----------GTGTGCTGGCCAAAT-------TATTTTCAGCGCCTGGTGTTTGTTTTTTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTTTTC chr4 + 94230402 78800008 78800007 78800111 78800008 78800007 78800111 104 TAAGTACTTTTAAAACCCAATGTGTTCTTCTTAAATAGTGCTCTATTTTCACTCTTCTGTGTGTGTTTTTTTTTTGTTGTTGTTGTTGTTATT-TGTATTTTTCC .....:.....----------....x..xx::....-------........x:x:::x....x...........................:..-.x.:.....:. 11M10I15M7I50M1D11M 69/87 79.3% 104/94230402 0.0% 18/87 20.7% 32562219 NA +3351 chr4 + 190214555 111377741 111377740 111377823 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATGACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:.........:.::........x.xx.x...xx.........::.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 35344544 NA +3003 chr4 + 190214555 111452602 111452601 111452654 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 88204880 NA +3127 chr4 + 190214555 111452617 111452616 111452657 41 TATATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.......................x.x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 107043535 83171020 +3386 chr4 + 190214555 111465010 111465009 111465082 73 AAAAAAGAAAGAAAAGAAAGGAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAGGAAGGAAGAAAGGAAGGAAA chr4 + 94230402 58935744 58935743 58935814 58935744 58935743 58935814 71 AAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAG--AGGAAA ..::..:..x...:..:........x..:....x....:..::.....x.:x.x....:.:....--...... 65M2D6M 53/71 74.6% 71/94230402 0.0% 2/71 2.8% 52529266 NA +3233 chr4 + 190214555 111465064 111465063 111465145 82 AAGGAAGAAAGGAAGGAAAAGAAAAGAAAAGAGAAGGAAGAGAGGAAGGAAGGAAAAAGAAATGTCAAAATTAGAAAATTAT chr4 + 94230402 80070301 80070300 80070382 80070301 80070300 80070382 82 AAAAAGGAATGGAAGAAAAAGAAAAAGAAAAATAATGAGAATGGCAAGGAAGTAAACAAAACCTTTTGAAGTAGAAAAATGT ..::.:...x.....:.........::...:.x..x..::.x:.x.......x...x.:..x:x.:x:..x.......x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 31394763 NA +3117 chr4 + 190214555 111471377 111471376 111471431 55 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATAAA chr4 + 94230402 79265519 79265518 79265573 79265519 79265518 79265573 55 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAA .............::........xx.:......:...:.::.:..:.:.:::... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 32205858 NA +3130 chr4 + 190214555 111482659 111482658 111482702 44 CGAAATTCCATTAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 52382852 52382851 52382895 52382852 52382851 52382895 44 CAAAGTTCCATTAAAAAAAAAAAAGAAAGAAAGGGAAGACGAAA .:..:............................::.::.x.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 59099807 NA +3080 chr4 + 190214555 111484864 111484863 111484929 66 GTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:...........::........x.xx.x...xx:.x......::.:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 35451663 NA +3102 chr4 + 190214555 111487378 111487377 111487448 71 CGCCTGTAATCCCAGCTACTTCAGAGGCTGCGGCAGGAGAATCAACTGAACCCGGAAGGCGGAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.x....:.:..........x.:......x.x.xx.x...x..x:.......:....x:xx:.....:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 35454171 NA +3026 chr4 + 190214555 111490772 111490771 111490846 75 ATGTTTTAAAAAGAAAGAAACAAACAAATGAAAAAAACCCTAGGAACATGCAATGTGTGAAAATGCTTTGTGATG chr4 + 94230402 42933549 42933548 42933623 42933549 42933548 42933623 75 ATGTTTAAAAAAAAAACAAACAAACAAACAAAAAAAACTTCTGTAAGTGATGATCTTTTTAAATACCTAGTGATG ......x.....:...x...........::........:::x.x..xxx:::..x.x.xx....:.:.x...... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 68557223 NA +3023 chr4 + 190214555 111493146 111493145 111493203 58 AACTATACACACACACACACACACACACACACACACACACGAAAAACTTAAAGGAAAA chr4 + 94230402 67290036 67290035 67290093 67290036 67290035 67290093 58 AACTATAAACATCCAAACAAACACAAACACACACACACAAAAAAACATTAGAGAGAGA .......x...:x..x...x.....x.............x:....xx...:..::.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 44203110 NA +3239 chr4 + 190214555 111493151 111493150 111493226 76 TACACACACACACACACACACACACACACACACACGAAAAACTTAAAGGAAAAAATTAAAAATACATATATTTTGC chr4 + 94230402 12801935 12801934 12802010 12801935 12801934 12802010 76 TGTACGTATACATGACCATACACACACACACACACAAAAAACTAAAATAAAATAATAACAGGAATATCCATTATGC .::..::.:...::xx..:................:.......x...x:...x...x.x.::x.:..x:...x... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 98691216 91523339 +3066 chr4 + 190214555 111574718 111574717 111574834 117 TATATATATATATATGTGTGTGTGTATATATATATATATACGTGTATATATATATACATATATACGTATATATATATATGTGTATATATATATGTGT----ATATATATATGTGTATATAT chr4 + 94230402 91738175 91738174 91738295 91738175 91738174 91738295 121 TATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ....x....:.x.x:x.:..xxx.:.....x....:.x.x.x...:x.xx.....x:..::...:....xx...x.x.x..x..:.x.x...::.::----.:.....:...x........ 97M4I20M 76/117 65.0% 121/94230402 0.0% 4/117 3.4% 19836543 NA +3173 chr4 + 190214555 111574727 111574726 111574793 67 ATATATGTGTGTGTGTATATATATATATATACGTGTATATATATATACATATATACGTATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:......:::...:...:x::.:..:.x.:.....:.x.............:xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 65511428 NA +3215 chr4 + 190214555 111574732 111574731 111574848 117 TGTGTGTGTGTATATATATATATATACGTGTATATATATATACATATATACGTATATATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATGTGTATATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..::x.....:x:..:x::.:::..x.....:.::::.x:.::x.::.:..::..x..::.:....::.x.::..:.:....:::.x.::.:.....::..::.x......::.:.. 117M 62/117 53.0% 117/94230402 0.0% 0/117 0.0% 106360527 83854028 +3318 chr4 + 190214555 111644316 111644315 111644382 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCCTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x.:.:.........:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 35611105 NA +3041 chr4 + 190214555 111655579 111655578 111655631 53 CAAACTATATATATACACACACACATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857604 6857603 6857656 6857604 6857603 6857656 53 CAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ...:xx.......:::...:..::...x..........x...........x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 104797975 85416580 +3158 chr4 + 190214555 111655587 111655586 111655633 47 ATATATACACACACACATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ........::...:..:....x:.........x...........x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 104797977 85416578 +3032 chr4 + 190214555 111661560 111661559 111661620 61 GGGTTTTTAAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGT chr4 + 94230402 85834525 85834524 85834585 85834525 85834524 85834585 61 GGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGT ........x.xx:..x.....x.................:.xx:...:x.:..::..:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 25827035 NA +3687 chr4 + 190214555 111671059 111671058 111671128 70 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGCAGGTGGAAGTTGT chr4 + 94230402 76033206 76033205 76033275 76033206 76033205 76033275 70 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ....x....:.:...........::........x.xx.x...x.............x..x.xx::.:... 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% 35637853 NA +3071 chr4 + 190214555 111679311 111679310 111679376 66 TTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATGCTAATG chr4 + 94230402 85834535 85834534 85834600 85834535 85834534 85834600 66 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG ..x........x.................:.xx:...:x.::.:::.:...:x.:.:...:.x... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 25844776 NA +3189 chr4 + 190214555 111684358 111684357 111684434 77 AGCTTTTATTAACCAAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGGAGAAGAGAAGAGAGGAGAAGAGAGAAGAAGA chr4 + 94230402 84536558 84536557 84536634 84536558 84536557 84536634 77 AGGCCTTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGA ..x::..:.:..xx:...::.........:..x.:x...:.x.:.:..x::....:.:...::...:....:..... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 27147800 NA +3066 chr4 + 190214555 111698370 111698369 111698468 99 AGGAAAAGGGAAGGGAAGGGAAGGAAAGGGAAGGGAAGGGAAGGAAAGGGAAGGGAAGGGGAAGAAGGGGGGAAGTGGGAGGGAGGGGGGAGGAAGGAG chr4 + 94230402 1405845 1405844 1405943 1405845 1405844 1405943 99 AAGGAAAGAAATGAGAAGAGATGGAGAGGTTTATGAGGACTGGGAAAGGGAAGATATGGGGAAGACATCAAAGAACAAGAAGAGGGAGGTGGAAAGGAG .:.:....::.x.:....:..x...:...xxx:x..:.:xx:...........:x.x........x:xx::::.::::..:.::..:..x:.:...... 99M 58/99 58.6% 99/94230402 0.0% 0/99 0.0% 110292525 79922030 +3057 chr4 + 190214555 111714432 111714431 111714494 63 CACATATATATATAAAATATATATATTTTATATATAACCCCGCATATATATATATATAAAATA chr4 + 94230402 28380938 28380937 28381000 28380938 28380937 28381000 63 CATGTGCATGTATGCAGTATGTATATTTTATATATATCTACATATATAGATATCTCTAAAACA ..::.::..:...:x.:...:...............x.:x.::.....x....x.x.....:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 83333494 NA +3365 chr4 + 190214555 111771482 111771481 111771589 108 ACATTGTCATATTTACATGCTCATGCTCTCTCTCATGTGTTTATATGTACACATATTCACATATATACACACACTTTCTGCAGCTATGCATGTATATATATATATACA chr4 + 94230402 60515097 60515096 60515204 60515097 60515096 60515204 108 ACATTATTAATATTTTATTCATGTATTCTCTTTGATTCTTATATATGTGCATGTACATACATATTCATATCCACACTACCCAAGTATTCATGTATATAAATACATACA .....:.:.xxx..x:..x.x::.::.....:.x..x:x.x.......:..::..:x:......x:.:.:x...x:.x:x..:x...x..........x...:..... 108M 68/108 63.0% 108/94230402 0.0% 0/108 0.0% 51256385 NA +3058 chr4 + 190214555 111810124 111810123 111810182 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.:.....:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 35776918 NA +3172 chr4 + 190214555 111820678 111820677 111820747 70 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x::.--....:.:...........::........x.xx.xx..x.:...........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 35787481 NA +3086 chr4 + 190214555 111884938 111884937 111884986 49 TTCTTTATTCTCTCTCTCCTTCCTTCCCTTCTTCCTTCTCTCTTCTCTT chr4 + 94230402 50993450 50993449 50993498 50993450 50993449 50993498 49 TTTCTCAGTCTCTCCCTCTTTTTTTCCCCTCTTCCTTCTCTCTGCTTTT ..::.:.x......:...:..::.....:..............x..:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 60891488 NA +3037 chr4 + 190214555 111890434 111890433 111890507 74 GTGCAACTATAGTCCCAACAACTCCAAAGGCTGAGGCAGGAGGATTGCTTGAGCCTAGGAGTTTGAGGCCACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....xx.:....:...:.x...:x..........x.xx.x.:.x::.....:..:..:..:..x:...:::.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 35857230 NA +3008 chr4 + 190214555 111938457 111938456 111938508 52 CTCTGTCTCAAAAAAAAAAAAAAAAAGAAAGGAAAGAAAGAAGAGGCTCCTC chr4 + 94230402 68015454 68015453 68015505 68015454 68015453 68015505 52 CTCTCTCACAAAAAAACAAAAAAAAAGAAAGAACAGAAATTGGGGGGTCCTC ....x..x........x..............:.x.....xx:.:..x..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 43923003 NA +3311 chr4 + 190214555 111946240 111946239 111946311 72 GCACCTATAGTCCCAACTACTCAGGAGGCTGAGGCGGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:...:.....::::........x.xx.x...x.:...........:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 35913034 NA +3664 chr4 + 190214555 111953978 111953977 111954078 101 CATGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAACCAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....::.::.--......:...........::........x.xx.x...x::........::.:..x.xx:..:..:..------..x...:..... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 35920781 NA +3941 chr4 + 190214555 111970177 111970176 111970332 156 AAATGCCCATCAATCAATGAGTGGATAAAGAAAATGTGGCATATAT----ATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATACACA------TATATATACATATATATATACACACACACAC chr4 + 94230402 21109137 21109136 21109302 21109137 21109136 21109302 166 AAATGTCAAAGCATCGGTGTATGGGCTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC .....:.x.xxx...::..x:...::x:..x:x..x..:x.x...x----..x.::x....:........x.x....x.:..:.x.....::.:x:.:......x:..:..xx..:.::...:...x..------.:.:....::.:...:x...::..::..... 46M4I79M6I31M 97/156 62.2% 166/94230402 0.0% 10/156 6.4% 90861040 NA +4187 chr4 + 190214555 111970194 111970193 111970330 137 TGAGTGGATAAAGAAAATGTGGCATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATACA------CATATATATACATATATATATACACACACAC chr4 + 94230402 21109163 21109162 21109302 21109163 21109162 21109302 140 TGAGCGTATCTGAAAAATAAGGAA---ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....:.x..xx::.....:x..x.---..x.::x....:..:.....x.x....x.:..:.x.....:...x:.:.....:x.:....:xx....:...:..:x..------::.:.....:::...:x....:..::..... 24M3D79M6I31M 88/134 65.7% 140/94230402 0.0% 9/134 6.7% 90861031 NA +3082 chr4 + 190214555 111970203 111970202 111970277 75 AAAGAAAATGTGG-----CATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACA chr4 + 94230402 27325484 27325483 27325563 27325484 27325483 27325563 80 AGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .:..:.....:.x-----::....:.:x.:x.:x..x..:...........:.......:..::.........:x.x... 13M5I62M 53/75 70.7% 80/94230402 0.0% 5/75 6.7% 84644719 NA +3077 chr4 + 190214555 111970226 111970225 111970297 72 TATATATATATGTGTGTGTGTGTGTGTGTGTAT----------ATATACATATATATATACATGTATAGATACATATATATA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.:...x...................----------...:.:..:..x...:.::.x...:x.:.....:.:.:. 33M10I39M 53/72 73.6% 82/94230402 0.0% 10/72 13.9% 26135693 NA +3191 chr4 + 190214555 111970228 111970227 111970299 72 TATATATATGTGTGTGTGTGTGTGTGTGTATATATACATAT--ATATATACATGTATAGATACATATATATACA chr4 + 94230402 39937175 39937174 39937248 39937175 39937174 39937248 74 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA ...............::...x......::xxx.x......:--x:...:....::...x.......x..:.:.. 41M2I31M 53/72 73.6% 74/94230402 0.0% 2/72 2.8% 72033053 NA +3725 chr4 + 190214555 111970228 111970227 111970299 72 TATATATATGTGTGTGTGTGTGTGTGTGTATAT----------ATACATATATATATACATGTATAGATACATATATATACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x.....x...............:...----------........:..x........x..x::...:...:.:... 33M10I39M 58/72 80.6% 82/94230402 0.0% 10/72 13.9% 26135695 NA +3089 chr4 + 190214555 111970230 111970229 111970297 68 TATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATA chr4 + 94230402 70094142 70094141 70094209 70094142 70094141 70094209 68 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA .:..x..:.......x...x...x.....:....::......x.:.xx.x:...:...:....::.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 41876088 NA +4489 chr4 + 190214555 111970230 111970229 111970312 83 TATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATACACATATATATACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.............:.:...xx..:..x::......:.:..:......:.x...:....:...:.:.... 83M 62/83 74.7% 83/94230402 0.0% 0/83 0.0% 26135697 NA +3226 chr4 + 190214555 111970250 111970249 111970343 94 TGTGTGTATATATACATATATATATACATGTATAGATACATATATATACACATATATATACATATATATATACACACACACACATATATATATA chr4 + 94230402 58675362 58675361 58675445 58675362 58675361 58675445 84 TGTTTGTATTTGAACTTGGATCTCTACA----------CATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ...x.....x.:x..x.:x..x.x....----------...x.x.:..::............:x:....:.:.........x..x......x.. 28M10D56M 62/84 73.8% 84/94230402 0.0% 10/84 11.9% 53294888 NA +3150 chr4 + 190214555 111990259 111990258 111990314 56 CTCCCCCTCTTTCTCTCTCTCACATACACACACACACACACACACAGCAAGGTAAA chr4 + 94230402 75248049 75248048 75248104 75248049 75248048 75248104 56 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagaga ..:..:....:..........x..:...............x.x.x..x:..:x.:. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 36742210 NA +3476 chr4 + 190214555 111992741 111992740 111992845 105 TCATAACTTTCCAAAAGTGAAGAGCAAAGTGAAAGATAGAAATGAAGGACAGACAAGAGGAAAGTGAGGTAGAGGAGAGGGAAATAGAAAGACAGATGCCAGAGA chr4 + 94230402 38171024 38171023 38171117 38171024 38171023 38171117 94 TCATCACTTTACAG-------GGGCCATTTAAAGGCTGGAGATGA----CAGACAAAAAGGAACTGGGGAAGAGGACAGCAGAAGAGAAAGAGAGAAGCCAGAGA ....x.....x..:-------.:..x.xx.:..:.x.:..:....----.......:.:.:..x..:..x......x..x::..x.......x...x........ 14M7D24M4D56M 69/94 73.4% 94/94230402 0.0% 11/94 11.7% 73821717 NA +5230 chr4 + 190214555 111993038 111993037 111993285 248 AAAATCAATCATCTT-TTCTAGATCTCTGCAGGAACAAATTTTCCAGAGATTTAGATTTGGTAAACAGACCAAGCCGGATCAC-ATGAGGAACTTAAAGGGGATTTGACATGTCAAACACACAGAAGCCAAGGTTTGCCTATAATGTTGAAAATAACACCATGCAT--GGCCTTTTAGTATCAGGCTCATTTCAAATAA----CTGCAATTCATAGAGGCTTCCCTAAGAAACCCAAGACAGTGTA--CTAGTTTTTA chr4 + 94230402 53833274 53833273 53833520 53833274 53833273 53833520 247 AGAATCAGACATTTCATTCTGGACCTC-------ACAAGTTTTGTAAAATTGCAGATTTAATAAACAAACTGTTTTACGTCTCTGTAAGGAACTTAGAGGGGATTTTGAAAGTCAAACACTGAGGACCCTTGCTTTGACTGTGGTGGTAAAAGTAACATC-TGCCTCAGACTTTTTAACAACAGACT--GTTCAAATCATTCTTTGCAG-CCATGGTAGGAGACCTGACAGACATAAGCCACCCTACCCCAGTTTTTA .:.....:x...:.:-....:..:...-------....:....x:.:.:x.x:......::......:..::xx:::x:..x.-:.:.........:.........x:x.x.........xx..:.x..xx.x....x..:.::..x.:...:.....:.-...x.--.:.:.....::.x...:..--x.......x.----:....:-:...:.x:.xxxx...:.x.:..x:...x..x:x..--.:........ 15M1I11M7D49M1I76M1D5M2I19M2D10M4I6M1D36M2I10M 158/237 66.7% 247/94230402 0.0% 21/237 8.9% 58159764 NA +3208 chr4 + 190214555 111998314 111998313 111998386 73 TACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x......:.........:.::........x.xx:x...x.:........::.:..x.xx:.x:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 35965109 NA +3275 chr4 + 190214555 111999245 111999244 111999358 114 AAGGAGGGA---AGGAAGGAAGGAAGGAAG-------GAAGGAAGGAAGGAAGGAAG------GAAGGAA--------------GGAAGGAAGGAAAGGGAGGGGAGGGGAGGGGAGGGGAGAGGAGGGAAGGAGGGAAGGAGG chr4 + 94230402 32265486 32265485 32265629 32265486 32265485 32265629 144 AAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ....:....---...:..x.x...::.:..-------..:.::x.x:...::..:..------......:--------------.........:....:....:....:.....::..::::....:::x.:x..:...:x... 9M3I18M7I20M6I7M14I60M 78/114 68.4% 144/94230402 0.0% 30/114 26.3% 79733759 NA +3001 chr4 + 190214555 111999818 111999817 111999880 63 AAAAAAATAAAATAAAATAAAGAAAGAAAGAAGGAAAGAAAGAGAGAGAGAGAGAAAAGAAAG chr4 + 94230402 34424482 34424481 34424544 34424482 34424481 34424544 63 AAAGAAGTAAAATAAAATAAAGTAGGGAAGCAGTACTTGAAAAGAAATAGAAAAAGAAAAAAG ...:..:...............x.:.:...x..x.xxx:..:...:.x...:.:.:..:.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 77575336 NA +3167 chr4 + 190214555 111999822 111999821 111999888 67 AAATAAAATAAAATAAAGAAAGAAAGAAGGAAAGAAAGAGAGAGAGAGAGAAAAGAAAGAGAAGCAA chr4 + 94230402 5778661 5778660 5778727 5778661 5778660 5778727 67 AAGGAAAAATAAATAAATAAGAATAGAAGAGAAGGGATGGAGAAAGACAGAAATGAGAGAGAAGTAA ..:x....xx.......x..::.x.....::...::.x:....:...x.....x..:.......:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 106221161 83993394 +3012 chr4 + 190214555 112013639 112013638 112013719 81 CAACAAAGCAAGACCCCCTCTCAAAAAAAAAAAAAAAGAAAGAAAGAAAGATAAAAGAAAAAAAAAAGAAAAAAAAGATAC chr4 + 94230402 53666523 53666522 53666603 53666523 53666522 53666603 81 CAACAAAAAAACAACCACAACCAAAATGAAAACCAAAAGTACTGGGAAAAATTAAAGAAAAAAAGAAAAGAAAAGAAACAC .......:x..x.x..x.xx:.....x:....xx...::x.xx::....:..x...........:..:.:....:.:.:.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 58347116 NA +3960 chr4 + 190214555 112018815 112018814 112018897 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x.............:..x:xx:.....:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 35985618 NA +3276 chr4 + 190214555 112038431 112038430 112038511 81 GTGGTGGCACACACCTGTAATCACAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAGAGGCCAAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......-----...x....:.:x..........::........x.xx.x...x.:..........::..x::x:..:..:. 6M5D70M 55/76 72.4% 76/94230402 0.0% 5/76 6.6% 36005230 NA +3036 chr4 + 190214555 112042633 112042632 112042672 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 107633551 82581004 +3182 chr4 + 190214555 112042635 112042634 112042684 50 TATATATATATATATATACACACACACACACACACACACACACACACAGT chr4 + 94230402 66743631 66743630 66743680 66743631 66743630 66743680 50 TATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGT ....x...x...:..x.....x...x..x:.................... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 45299004 NA +3546 chr4 + 190214555 112052559 112052558 112052621 63 GTGGTGCATGCCTGTACTCCCAGCTACCTGGGAGGCTGAGGCATGAGAATCACTTGAATCCAG chr4 + 94230402 76033201 76033200 76033261 76033201 76033200 76033261 61 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ........:.--....x.:........:..::........x.x..x...x........:.... 10M2D51M 50/61 82.0% 61/94230402 0.0% 2/61 3.3% 36019358 NA +3041 chr4 + 190214555 112062490 112062489 112062560 71 AAGGAAAGAGGGAGGGAAAGACGGAAGGAGAGAAAGACAGAGGGAGGGAGGGAGGG--AGGGAGGGAGGCAGG chr4 + 94230402 73744718 73744717 73744789 73744718 73744717 73744789 72 AAGGAAAAAGAAAGGGAAAGG-GGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG .......:..::........:-....:....:..:.:x.:.:..:...:..x:...--:...x..:.:...:. 21M1D34M2I15M 50/70 71.4% 72/94230402 0.0% 3/70 4.3% 38317772 NA +3379 chr4 + 190214555 112117928 112117927 112117993 66 GTGGCACATGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..:.--......:.........:x.:........x.xx.x...x.:...........:.. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 36084727 NA +3557 chr4 + 190214555 112118075 112118074 112118179 105 CTATACGTATCT---TTTGCCTCTCTCTCTATATATATACATACATATATATATACACACACATATATATACACATACACACACACACACACACACACATATATATTT chr4 + 94230402 60831521 60831520 60831625 60831521 60831520 60831625 105 ccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC---TGTGCGCATGTGTGTATATTT .:....:.....---.:..:..........x.:.:....:..:::....:.:.:..:.....x.x..x.....:x..:.::xx.---::::.:..::::.:....... 12M3I69M3D21M 67/102 65.7% 105/94230402 0.0% 6/102 5.9% 51286554 NA +3020 chr4 + 190214555 112118109 112118108 112118176 68 TACATACATATATATATACACACACATATATATACACATACACACACACACACACACACACATATATA chr4 + 94230402 54963193 54963192 54963260 54963193 54963192 54963260 68 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA .::...:x:...:.x..:.....x:.....:.:.....:.xx...:::.:.x..:........x.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 57154916 NA +3142 chr4 + 190214555 112118135 112118134 112118212 78 TATATATACACATACACACACACACACACACACACATATATATTTGTTTCATTTTGTTTTGTTTTTTGTTTTTTTTTT chr4 + 94230402 10247087 10247086 10247164 10247087 10247086 10247164 78 TATATGCACACAAATACACACAGAGATGCACACATATGTATATTTTTGGAAGCATTTTTTCGCTTTTGTTTTATATTT .....::.....x.:.......x.x.::......:..:.......x.xxx.x:x.x....xx:.........x.x... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 101871048 88343507 +3203 chr4 + 190214555 112119100 112119099 112119155 56 GAGGAGAGGAGGGGAGGAGAGGGGAGGAGAGGGGAGGGGAGAGAAGAGAGGGGAGG chr4 + 94230402 24028141 24028140 24028196 24028141 24028140 24028196 56 GAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAG ...:.:....:::xx..::.....:....:......::............::..:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 88090959 NA +3180 chr4 + 190214555 112119134 112119133 112119198 65 AGGGGAGAGAAGAGA----GGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGGAAAGAGAG chr4 + 94230402 24028137 24028136 24028205 24028137 24028136 24028205 69 AAGTGAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGACAG .:.x....:...::.----...:.....:..:.:.......:.....:....:::..:..x.:...x.. 15M4I50M 47/65 72.3% 69/94230402 0.0% 4/65 6.2% 88090997 NA +3308 chr4 + 190214555 112126189 112126188 112126265 77 GTCATGCACCTATAGTCCTAGCTACCAAGAAGGCTGAGATGGAAGGATCATTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.....x.:....:.:......:x::.........x:xx:x.:.x..:....:.....:..x..x:.....:.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 36092988 NA +3009 chr4 + 190214555 112138031 112138030 112138086 56 AGATAGAAATCATAGATTTTTTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 91449153 91449152 91449208 91449153 91449152 91449208 56 AGACATGAGTCATGGCTATCTTGTTCTTTTCTTTCATTCTTTTTTTCTTCTTCTTT ...:.x:.:....:.x.x.:..x............x..:.......:..:..:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 20688878 NA +3085 chr4 + 190214555 112166974 112166973 112167043 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 36133777 NA +3086 chr4 + 190214555 112175766 112175765 112175835 70 AAAAAAAAAAAGAAAGAAAATGAAATGTTCTTATTGGGCAGGCTTGGAGCTGGGGAATGGAGACATCTTC chr4 + 94230402 85279273 85279272 85279342 85279273 85279272 85279342 70 AAAAAAAAAAAGAAAAACACTAAAAAGCTCTCTTTTGGCTAATGGGTAACTGGGAAATGGTAACACCTTC ...............:.x.x.:...x.:...:x..x...x:::xx.x.:.....:.....x:...:.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 26896493 NA +3010 chr4 + 190214555 112179927 112179926 112179994 68 ATATATATATATGTATATGTGTGTGTGTGTGTGTATATATATATATCACATATATTACATAATGTATA chr4 + 94230402 8684325 8684324 8684392 8684325 8684324 8684392 68 ATACATATAGCTCTATGTGTGTATCTGTGTGTGTATATATATAAATAGCTACTGTGACAAAATGAGTA ...:.....xx.x...:.....:.x..................x..x:.xxx.:.x...x....x:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 103495602 86718953 +3235 chr4 + 190214555 112179936 112179935 112179995 60 TATGTATATGTGTGTGTGTGTGTGTATATATATATATCACATATATTACATAATGTATAT chr4 + 94230402 72321894 72321893 72321953 72321894 72321893 72321953 60 TGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACATTTTAATATATAT .:...xx.....................:.........xx..x..:xx:x....:..... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 39858042 NA +3098 chr4 + 190214555 112210623 112210622 112210692 70 CGTAGTGGCGGGCACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCAAGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.--...x......:...........::........x.xx.x...xx:.x...:....::.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 36177426 NA +3105 chr4 + 190214555 112227349 112227348 112227406 58 TAAAATACTTGAGAGAAGAAAATGTTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 82956915 82956914 82956971 82956915 82956914 82956971 57 TAAAATA-TAGATTTAAGTAATTGTTGTGGGTTTTTTTTCCTGTTTTTTTTTTTTTTT .......-.x..xxx...x..x.................::.x............... 7M1D50M 48/57 84.2% 57/94230402 0.0% 1/57 1.8% 29270434 NA +3014 chr4 + 190214555 112227361 112227360 112227407 47 GAGAAGAAAATGTTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 75674434 75674433 75674480 75674434 75674433 75674480 47 GAATAGAAAATATTGTGGGTTTTTTGTTTTGGTTTTTTTTCCTTTTT ..:x.......:.............x....xx........::..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 36552927 NA +3877 chr4 + 190214555 112246366 112246365 112246448 83 CATGGTGGTGCACGCCTGTAGGCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--.....x:...........::........x.xx.x:..x.:...........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 36213169 NA +3606 chr4 + 190214555 112249521 112249520 112249599 79 GTGGTGGGCGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.............::........x.xx.x...x.:........::.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 36216320 NA +3535 chr4 + 190214555 112289919 112289918 112289991 73 TGCACCTGTAGTCCCAGCTACTCAGAAAGCTGAGACATGAGAATCGCTTGAACGTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:::..:......x.x..x...x.:.......x::.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 36256714 NA +3180 chr4 + 190214555 112324440 112324439 112324487 48 CTGGCTTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 34521139 34521138 34521186 34521139 34521138 34521186 48 CTGGCATTTTTTGTTTGTTTGTTTGTTTTTTGGGTTTTTTTTTGCTCT .....x......................x..xx.....x.....:.:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 77803301 NA +3094 chr4 + 190214555 112324446 112324445 112324482 37 TTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 55690046 55690045 55690082 55690046 55690045 55690082 37 TTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT ......x........:..................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 56634400 NA +3034 chr4 + 190214555 112333885 112333884 112333942 58 TTCTTTTCCTTTTGCTTTTGTTTTTTGTTTGTTTGGTTTTGTTTTTTGTGTTTTTTTT chr4 + 94230402 75055488 75055487 75055545 75055488 75055487 75055545 58 TTCTTTTTTTCTGGCTCTTAATCTTATTTGATTTGGGTTTGTTTTTTGTTTTTTTTTT .......::.:.x...:..:x.:..xx..x:.....x............x........ 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 37278397 NA +3626 chr4 + 190214555 112334303 112334302 112334384 82 TGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGCCATAAGAATCGCTTGAACCTGGGAGGTGGAGATTGCA----ATGA-GCCAAG chr4 + 94230402 76033205 76033204 76033291 76033205 76033204 76033291 87 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ...:.x......:.:.........::..........x.:x...x.:........::.:..x.xx:.::..:.----....-...... 72M4I4M1I6M 61/82 74.4% 87/94230402 0.0% 5/82 6.1% 36301098 NA +3822 chr4 + 190214555 112352832 112352831 112352987 156 TTATTCATTTGTTTATTTTTTCCCAATGTATGAATGT----ACTTCAATTTCCTTCCTTCCTTCCTTTC------TTTCTCTTTCTTTCTTCCTTTCTTTCTCTCTCTTTCTGTCTT----CTCTCTTTTTCTTCTTCCTTTCCTTTCCTTTCCTTTTTTTTTTTTTTTT chr4 + 94230402 63697066 63697065 63697235 63697066 63697065 63697235 170 TCAGTAATTTCCATGCTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .:.x.x....x:x.::...:.:x:x..:.x.:.....----...:..xxxx.:..x:.:.::.......------.........:....:..x..::.:.x.:..xx.:.:......----..:.x:....::x.xx:.....::.:..:.:::..:...:..::..... 37M4I28M6I42M4I49M 97/156 62.2% 170/94230402 0.0% 14/156 9.0% 48655766 NA +3147 chr4 + 190214555 112352876 112352875 112352959 84 TTTCCTTCCTTCCTTCCTTTCTTTCTCTTTCTTTCTTCCTTTCTTTCTCTCTCTTTCTGTCTTCTCTCTTTTTCTTCTTCCTTT chr4 + 94230402 31719014 31719013 31719097 31719014 31719013 31719097 84 TTACCCTTCTGTCTTTCCTTCTGCCTTCCTCTTCATTTTTTGCTGACTGCTGCCCTCTGTCTTCCTTTTTTTTCTTTATCTTTT ..x..:.:..x:...:.:....x:..:::....:x..::..x..xx..x::x.::.........::.:........:x..:... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 80633862 NA +3013 chr4 + 190214555 112407476 112407475 112407530 55 CTCTAAAAATTAATTAAAAATAAGTAAATAAAAATAACAGAGAGAGAGACTTGAA chr4 + 94230402 71605818 71605817 71605872 71605818 71605817 71605872 55 CTCTGCAAATTAAGTAAAAATAAGTAAGTAAAAATAAGTGAGAGTAACAAATGAA ....:x.......x.............:.........xx.....x:.x.xx.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 40801658 NA +3322 chr4 + 190214555 112415508 112415507 112415579 72 GCGCACGAAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.::.x.:.:...........::........x.xx.x...x::..............x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 36382302 NA +3519 chr4 + 190214555 112429836 112429835 112429909 74 CCTCAAAAAAAAAAAAAAAGAA----AAGAAAAGAGAAAAAGAAAAAGAAAAAAAAAAGAAAGAAAAAAATACTACAC chr4 + 94230402 84789508 84789507 84789585 84789508 84789507 84789585 78 CTTTAGAAAAAAAAAAAATGCATTTTAATATCACTGAAAAAAAAAAGGAAAAAAAAAAGGAGGGAAAAAACCCTACAC .:.:.:............x.x.----..x.xx.xx......:....:............:.:.:......:x...... 22M4I52M 57/74 77.0% 78/94230402 0.0% 4/74 5.4% 27640328 NA +3201 chr4 + 190214555 112443608 112443607 112443649 42 CTCAAAAAACAAAAGCAAACAAACAAAAAAACTCTTTTCTTT chr4 + 94230402 53915007 53915006 53915048 53915007 53915006 53915048 42 CTCAAAAACCAAAAACAAACAAACAAAAAAACCCTCTTTTTT ........x.....:.................:..:..:... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 58528601 NA +4280 chr4 + 190214555 112455450 112455449 112455528 79 GTGGCTCACGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCATGAGAATCACTTGAACCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x....--....:.:............:........x.x..x...x.............:..x:.x:..:..:.. 10M2D67M 61/77 79.2% 77/94230402 0.0% 2/77 2.6% 36422249 NA +3175 chr4 + 190214555 112463483 112463482 112463612 130 TCATCCCATATATGTCCACAATACATATATATGTTCATATATATATATATATATATATATATATATATATATATATATA--------TATGTTC----------ACATGTACATATATGCTCAT-----------------CGCAGTACTGCTCACAATAGCAAA chr4 + 94230402 56938564 56938563 56938728 56938564 56938563 56938728 165 TCATCACCTTTGTTTGCACCACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATAACAGATACTGTATTCATTATTCTGTACATGCAGATGTATATGCATATAAAAGCATTAAAATCAGCAGGACTGCCAAGAGGAGCAAA .....x.x.x.:.x.x...x.:.....x....:..x.x.....x..:x......::x.x.....:...x:.x.......--------.:.:...----------.....:.x..:...::x...-----------------x....x.....:x.x.:x...... 79M8I7M10I20M17I24M 92/130 70.8% 165/94230402 0.0% 35/130 26.9% 55524919 NA +3001 chr4 + 190214555 112465037 112465036 112465086 50 CATATATATACACACACACATATATATGTACACGTATATACACACACACA chr4 + 94230402 27759112 27759111 27759161 27759112 27759111 27759161 50 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA .....:...x:...x........:.:.:..::.:.:.......:...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 84705925 NA +3008 chr4 + 190214555 112465037 112465036 112465090 54 CATATATATACACACACACATATATATGTACACGTATATACACACACACACACA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...:.:.:..::.........x...:x::.:.:...:.:...:........... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 89217316 NA +3630 chr4 + 190214555 112493600 112493599 112493669 70 CATGGTGGTGCATGCCTGTAATTCCAGCTATTTGGGAGGCTGAGGCGGGAGGATCACTTGACCCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--....:.........:...::........x.xx.x.:.x.......x.....:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 36460403 NA +3096 chr4 + 190214555 112493913 112493912 112493982 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 36460716 NA +3045 chr4 + 190214555 112496020 112496019 112496072 53 AAAATCATTTTTAAATGTTTATTTACTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 65002726 65002725 65002778 65002726 65002725 65002778 53 AAGTTCATTGTTAATTGTCTATCTGATTTTTCTTTTTTTTTTTTTCCTTTGGG ..:x.....x....x...:...:.:x.....:.............::....:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 47493294 NA +4388 chr4 + 190214555 112514928 112514927 112515204 277 CCCGGCAGGCCCCCGCCGCCGCCCCCGCAGTGATCCGCCAGGCGCAGGGTCTCGGTGAGTGCCCAGATGTAGTTGTGGGCGAAGCGCAGGGTCTCGATCTTGGTGAGCTTGGCGTCCTCGGGGAACGTGGGGAGCACCTCGCGCAGCGCGTCCAGTGCCGCGTTGAGGTTGTGCATGCGGTTTCGCTCGCGGTTGTTGGCCTTCAGTCTACGGGTCTTCTTGATGCGCTGCACCGTCTCGGCCGTCTTGGCGCCTCGGG---AGACGGCCCGCGCCCGGG chr4 + 94230402 44836740 44836739 44836992 44836740 44836739 44836992 253 CCTTGAAAGCCTCCGCC----TCCCCGTTCTGGTCGTCCTTGGCCAGCAGGTCCATGAGGTAGGCGATGTAGCTGGTAAACAGGCGGAGGGTTTTGATCTTAGAGAGCTTGGTGTCGGCGGGCACGTTGGGGATGCACTCGCGCAGCTCCGCGAAGGCGCTGTTGATGCTCTGAGTCCTGCGCCGCTCCTTGCGGTTCGC----------CGTGCCCC-----TGCGCTTCAccg--------gccggggccccccgagcccgggcgggccgctcccggg ..:x.x.:...:.....----:.....:xx..:..xx..xx.xx...x:xx..x:....xxxxxx.......:..xx::xx.:...x.....:.:......:.x........:...xx....x.xxx......xxxx..........x.xx.x.:x..xx:.....x.:.x..x:.x.x.:x:.....x:x.:x...x..----------..x.:.::-----......x.....--------.:.xx...x..:..:.---:.:...x....x...... 17M4D179M10D8M5D12M8D16M3I18M 158/250 63.2% 253/94230402 0.0% 30/250 12.0% 67678188 NA +3133 chr4 + 190214555 112525544 112525543 112525636 93 ATAACTTTTCAG-AGAGATGAGAC--CTCATCATAGGGTTCTGGTGGATTTCTAAAGAAATACTTGATTTTTTTTGTTTGTTTGTTTTTGTTTTTT chr4 + 94230402 22514700 22514699 22514790 22514700 22514699 22514790 91 ATAGTTCTCCAGTAAAGATTATATGGTTAATCATAA-----TGGTGGTTTTGTAGATGAAATTGTGGTTTTGTTTGTTTGTTTGTTTTTGTTTTTT ...::.:.:...-.:....x.x.:--:.x......:-----......x...x..:.x:..xx:x..:....x........................ 12M1I11M2I10M5D55M 66/88 75.0% 91/94230402 0.0% 8/88 9.1% 90010844 NA +3038 chr4 + 190214555 112525604 112525603 112525643 40 TTGATTTTTTTTGTTTGTTTGTTTTTGTTTTTTGAGACAG chr4 + 94230402 32491220 32491219 32491259 32491220 32491219 32491259 40 TTGGTTTTTTTTGTTTGTTTGTTTTTGTTTTTGAACACAG ...:............................x:.x.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 80034384 NA +4584 chr4 + 190214555 112528798 112528797 112528875 78 CAGGATAGATGTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 21332725 21332724 21332802 21332725 21332724 21332802 78 CAAGATAAATATGAGATTTATATATATATACACACATATATATTATTTTCTTATTTTTTAtgtttttttttttgtttg ..:....:..:.x.x..x............:.:.:.........x....:..x......x.x...........x.... 78M 63/78 80.8% 78/94230402 0.0% 0/78 0.0% 91196073 NA +3238 chr4 + 190214555 112528810 112528809 112528880 71 CATATATATATATATATATATATATATATATTTTTT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG chr4 + 94230402 7823266 7823265 7823340 7823266 7823265 7823340 75 CATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ....:.........:.:......x.:.:x.xx.:..----..:...x..:..............x:.....:::. 36M4I35M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% 104705544 85509011 +3017 chr4 + 190214555 112528819 112528818 112528857 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 87736193 NA +3428 chr4 + 190214555 112531977 112531976 112532067 91 TGCACTTGTCATCCTAGCTACTGGGAAGGCTAAGTTGGGAGGATCACTTGAGGCTAGGAGGTTGAGGCTGTAGTGAGCTAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x...x:.:.:.......x.:......:..::xx.x.:.x.......:x.:..:..x..x:........------..x..x...... 73M6D12M 61/85 71.8% 85/94230402 0.0% 6/85 7.1% 36498772 NA +3473 chr4 + 190214555 112542202 112542201 112542284 83 CATGGTGGCAGGCACCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:.......:...::........x.xx.x:..x.:...........:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 36509005 NA +3106 chr4 + 190214555 112542745 112542744 112542818 74 ATTTTTTTCTTTTCTTTCCTTTTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTTTTTTCTTTTCTTTTCTTTTT chr4 + 94230402 53757783 53757782 53757856 53757783 53757782 53757856 74 ATTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTT ...:.:...:x.::...:.x::....xxx.:..::..::..::..:..:..:.....:.....:..:.:..... 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 58784962 NA +3189 chr4 + 190214555 112542750 112542749 112542822 73 TTTCTTTTCTTTCCTTTTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTTTTTTCTTTTCTTTTCTTTTTCTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTA-TTTCTTCTGTCTGTCTTT ...........x:.............::.:..:.:..x.:::.x:...:.x..x-......:.x.:.x..... 54M1D18M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% 43379403 NA +3096 chr4 + 190214555 112548974 112548973 112549043 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 36515777 NA +4517 chr4 + 190214555 112549310 112549309 112549453 144 TTTCTAATTAGATGTAGTCACTGACCTAGTAGCCCGCTATCTATA--CACA---CATGTGTACATACACATATACACACGTACACACACAT--------------TTGTGT----------ACATATACATACGTGTGTATAAACACAAACACATACACATACATGTACATAT chr4 + 94230402 68836979 68836978 68837144 68836979 68836978 68837144 166 TTTCTGATCAGAAGTTTGCA-------AGTATTTTGCTGTGGATAGTTACAGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT .....:..:...x..xxx..-------....x:::...:.xx...--:...---........:.....:.:.....:..x..........:--------------..:x..----------..:.:.:.:.::......:..x.......:.......:.:.....:...:.. 20M7D18M2I4M3I37M14I6M10I52M 102/137 74.5% 166/94230402 0.0% 36/137 26.3% 43712331 NA +3111 chr4 + 190214555 112561896 112561895 112561948 53 CATAATTCCTTTTCTCTTTTTTTTTTTTTTTTTTTTTGAGATAGAGTTTCACT chr4 + 94230402 90152630 90152629 90152682 90152630 90152629 90152682 53 CATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ...xx...........:...::.x.............x...x::.:....... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 22409266 NA +3008 chr4 + 190214555 112567923 112567922 112567964 42 AAATTAAAAAACAAAAACAAACAAACAAAAAAAACAGGAAAA chr4 + 94230402 34292957 34292956 34292998 34292957 34292956 34292998 42 AAAACAAAAAACAAAAACAAACAAACAAAAACACCAGAAAAA ...x:..........................x.x...:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 78274966 NA +3528 chr4 + 190214555 112586110 112586109 112586170 61 GTGCACCTGTGGTTCCAGCTACTTGGGAGGCTGAAGTGGGAGGATCACTTGAACCTGGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x...:..............::.......:x:xx.x.:.x..........::.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 36552906 NA +3073 chr4 + 190214555 112597892 112597891 112597928 37 CACACACACACACACTGAAAAAAAAAAAAAAAAGAAT chr4 + 94230402 90895225 90895224 90895261 90895225 90895224 90895261 37 CACACACACACACATTAAAAAAAAAAAAAAAAAGGAT ..............:.:.................:.. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 21702667 NA +3689 chr4 + 190214555 112601598 112601597 112601680 83 CATAGTGGTGGGCACATGTAGTCCCAGCTACTCGAGAGTCTGAGGCAGGAGGATTGCTTGAGTCCAAGAAGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.......--...:......:.........:..:..x.....x.xx.x.:.x::.....::...::.:x..x:.....:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 36568401 NA +3760 chr4 + 190214555 112602065 112602064 112602145 81 CAGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::..:.--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 12M2D67M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% 36568866 NA +3000 chr4 + 190214555 112607810 112607809 112607883 74 GTGCACCTGTGGTCCCAGCTACTTTGGAGGCTGAAGCAGGAGGATGGCTTGAGCACTGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:..........x::.......:x.xx.x.:.xx:.....:.x.x.:..x.:x:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 36574606 NA +4071 chr4 + 190214555 112610009 112610008 112610083 75 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGAGGTCAAGGCTGCAGGA chr4 + 94230402 76033205 76033204 76033279 76033205 76033204 76033279 75 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA .....x......:.........::::........x.xx.x...x.......:.....:..x.:x:.....:..:. 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 36576804 NA +3011 chr4 + 190214555 112610548 112610547 112610601 54 GCAATAGAGCAAGACTCCGTCTCAAAAAAAAGAAAGAAAAGAAAAAAAAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ....x:.........xx.x.........::.....:....:.....:x.x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 24227840 NA +3733 chr4 + 190214555 112622380 112622379 112622480 101 CATGGTGGCGCACGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGAAGGAGAATTGCTTGAACCCAGGAGGCAGAGGCTGCAGTGAGCCAAGATTATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:.....--....:.::..........::........xxxx.x...x::...........:..x:xx:.....:..------..x..x...... 14M2D67M6D12M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% 36589183 NA +3388 chr4 + 190214555 112629539 112629538 112629613 75 GTGTGCCTGTGGTTCCAGCTACTTGGGATGCTGAGGTGGGAGGATCACTTGAGCCTAGGAGGTGGAGGTTGCAGA chr4 + 94230402 76033204 76033203 76033278 76033204 76033203 76033278 75 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ...::.x...:..............::.x......x:xx.x.:.x.......:..:..:..x.xx:..:..:... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 36596335 NA +3287 chr4 + 190214555 112631538 112631537 112631601 64 GTCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x.::.x......:...........::........x.xx.x...x.::........:.:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 36598337 NA +3822 chr4 + 190214555 112634515 112634514 112634593 79 GTGGTGCGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--.:..:.:...........::........x.xx.x...x.............:..x:xx:.....:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 36601314 NA +3406 chr4 + 190214555 112647844 112647843 112647968 125 TGGTTTAAATTCTGTCATTGGCTTAACAATCCATCACCATTGCTAAAGTGCAATTCCAATTTATATTCAACAGAGTTGCATATTAGCAACAGTAATGGCCTGTAGCCAAGAACTGCACACAGTGT chr4 + 94230402 58652327 58652326 58652443 58652327 58652326 58652443 117 TGGTTTTCATCCTTC--TCGGCT--ACAGGCTAATACTGTTGCTAACATGCAACTCTGTTGTATAAAAATTGGAATTGCACTTTAGCAATGGTGATGGACTGT----AAGACATGCACACCGAGT ......xx..:..x:--.:....--...:x.:.x:..::.......x:.....:..::x.x....xxx.x::..:.....:x.......::..:....x....----....xx.......x.x.. 15M2D6M2D78M4D18M 80/117 68.4% 117/94230402 0.0% 8/117 6.8% 53995517 NA +3539 chr4 + 190214555 112662553 112662552 112662635 83 CGTGGTGGCACATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTTAGGAGTCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:..--...:.:...........::........x.xx.x...x.........::..:..::xx:..:...:. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 36629356 NA +3573 chr4 + 190214555 112667041 112667040 112667124 84 ACGTGGTGGCATGCGCCTGTAGTCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....--...:.x......:.......:.::::........x.xx.x...x............::..x.xx:..:..:.. 9M2D73M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 36633845 NA +3014 chr4 + 190214555 112668090 112668089 112668149 60 GCAACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAGAA chr4 + 94230402 88382708 88382707 88382767 88382708 88382707 88382767 60 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAA ....x:.........xx:x.........::.:..........:....x.x....:x.x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 24285382 NA +3761 chr4 + 190214555 112670494 112670493 112670563 70 CATAGTGGTAGGCACCTGTAGTCCCAACTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:......--....x......:...:.......::........x.xx.x...x.:.........:.:.. 9M2D59M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 36637297 NA +3722 chr4 + 190214555 112678509 112678508 112678578 70 CATGGTGGCATGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAAGCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--.....x....:.:.........::::........x.xx.x.....:...........:.. 8M2D60M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 36645312 NA +3638 chr4 + 190214555 112680389 112680388 112680469 81 CAGTGGCGCACACCTGTAGTTCCAGCTACTGGGGAAGCTGAGGCAGGAGGATTGCTTCAACCCAGGGGTTCAAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:....:--................x.::.:......x.xx.x.:.x::...x.......::.:.:x:.....:.. 12M2D67M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 36647190 NA +3245 chr4 + 190214555 112683918 112683917 112684007 90 ATATTATTTATATTATTTATATATTATATATTTATATATTATTTATATATTTATATAAATATGTATTTATAAATATTTATATAAATATAT chr4 + 94230402 56290079 56290078 56290167 56290079 56290078 56290167 89 ACGTTAGCCATAATATTTGAA-GTTAAATTGTTTTTTAAAATTTATGTATTTTCATACATGTGCATATATTAATATTTACATAAATATGT .::...x::...x.....:x.-:...x..xx..x.x..xx......:.....x:...x..:..:..x...x........:........:. 21M1D68M 63/89 70.8% 89/94230402 0.0% 1/89 1.1% 56393839 NA +3377 chr4 + 190214555 112686204 112686203 112686273 70 CATGGTGGTGGGCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x....:.:.........::.:........x.xx.x...x.:........::.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 36653007 NA +3494 chr4 + 190214555 112704414 112704413 112704510 97 GCTTTCTTTTTTTTTTTCTTTTCTTTCCTTTTCTTTTCTTTTCTCTTCTCTTCTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTCTTTTTTTCTTTCC chr4 + 94230402 26457972 26457971 26458067 26457972 26457971 26458067 96 GTTTCCCATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATTCTCCTGCCCTGTTTCTCATTTC-CTCTTTCATTCACCCTTTTCTCAATCC .:..:.:x..:.......:..:xx.........:..:..x:.:.x.....:.x:::.x:..:..x....-:......x...x:.:....:..xx... 69M1D27M 64/96 66.7% 96/94230402 0.0% 1/96 1.0% 86246442 NA +3870 chr4 + 190214555 112704431 112704430 112704565 135 CTTTTCTTTCCTTTTCTTTTCTTTTCTCTTCTCTTCTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTCTTTTTTTCTTTC--CTTTCTTTCTTTCTTTCCTTCCTTTCTTTCTTTCT----CTTTCTTTCTCTCTCTCTTTC chr4 + 94230402 4266729 4266728 4266869 4266729 4266728 4266869 141 CTTTTCCTCTTCGATTTTTTGTTTTCTCTTTTCTTCCACAGCTGCCCTCCGTTGTTCGTCTTTCTGCTTTTGTTCTTTCAGCTTTCTCTGCCTTTCTTCTAACTGTTTCTCATACTGGAGTTTTGCTTTTCTCTCCTTTTC ......:.::::xx.:....x.........:.....:x:xx..x::.:::x:.x.::x.......x.....x.......--......:.x::.:.:.:..xx..x.:.:..x.x..----:...x:..:......::.... 79M2I35M4I21M 86/135 63.7% 141/94230402 0.0% 6/135 4.4% 108437702 81776853 +3193 chr4 + 190214555 112704463 112704462 112704522 60 CTTCTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTCTTTTTTTCTTTCCTTTCTTTCTTTC chr4 + 94230402 42359333 42359332 42359392 42359333 42359332 42359392 60 CTTCTTTTCCCTCTTCTCTGTTATTTTCTTTCTTCTTTTTTTCATTCAGCTTTTTTGTTC ........:.:.:.:..:.x..x:...................x...xx:.:...:x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 70345130 NA +3061 chr4 + 190214555 112712017 112712016 112712080 64 TTTTGTCAAGATGTTACATACATACACACACACACACACATATATATATATATATTTATTTTTA chr4 + 94230402 67665818 67665817 67665878 67665818 67665817 67665878 61 TTTTGT---AATGTGTAATATATACATACACACACACACATATATATAAATTAACTTAGTTTCA ......---:....xxx...:.....:.....................x..xx.:...x...:. 6M3D55M 49/61 80.3% 61/94230402 0.0% 3/61 4.9% 45046199 NA +3038 chr4 + 190214555 112712388 112712387 112712436 49 ATATATATATATATATATATTTTTTTTTTTTTTTTTTTGAGATGGAGTT chr4 + 94230402 24792628 24792627 24792676 24792628 24792627 24792676 49 ATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATT .................x:........x.........::.:..x.x:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 87919760 NA +3181 chr4 + 190214555 112725269 112725268 112725318 50 AAGACTCTGTCTCCAGACAAAAAAAAAAAAAAAACAGGAAACAAATTCTA chr4 + 94230402 5802057 5802056 5802106 5802057 5802056 5802106 50 AAAACTGTATCCCCAGAAAAAAAAAAAAAAAAATCCAGAAACAAATTCCA ..:...x.:..:.....x...............x.x:...........:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 106923212 83291343 +3969 chr4 + 190214555 112729608 112729607 112729690 83 CATGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--......:...........::........x.xx.x..:x...........:.:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 36696411 NA +3412 chr4 + 190214555 112730498 112730497 112730579 82 ATGGTGGTGGGCACCAGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::......--...xx...:.:............:........x.xx.x...x.:........::.:..x.xx:.::..:.. 9M2D71M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 36697300 NA +3496 chr4 + 190214555 112743489 112743488 112743571 83 CTCTCCTTCATTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTGTCTCTCTCTCTCTTTTCTATCCTTTTTTTTTTTTTTTTT chr4 + 94230402 69568192 69568191 69568273 69568192 69568191 69568273 82 CTTTCCTT-GCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ..:.....-::.x..:xx..x:.....:.:..x::.::::.........:.::...x:...x...:................. 8M1D74M 57/82 69.5% 82/94230402 0.0% 1/82 1.2% 43175297 NA +3096 chr4 + 190214555 112743522 112743521 112743585 64 CTTTCTTTCTGTCTCTCTCTCTCTTTTCTATCCTTTTTTTTTTTTTTTTTTTGAGACAGAGTTT chr4 + 94230402 56838631 56838630 56838694 56838631 56838630 56838694 64 CTGTCATATTGTCTCTTTCCCTATTAAATTCCCTTTTTTTTTTTTTTTTTTTGAGATTTAGCTT ..x..x.x:.......:..:..x..xxx.x:.........................:xx..:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 55904891 NA +3181 chr4 + 190214555 112743530 112743529 112743568 39 CTGTCTCTCTCTCTCTTTTCTATCCTTTTTTTTTTTTTT chr4 + 94230402 13065006 13065005 13065044 13065006 13065005 13065044 39 CTTTCTCTTTCTCTCTCTTCTATCCTTTTTTTTTTTTTT ..x.....:.......:...................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 99678524 90536031 +3445 chr4 + 190214555 112753958 112753957 112754040 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGATAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:...........::........x.x:.xx..x...........:.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 36720761 NA +3386 chr4 + 190214555 112754096 112754095 112754168 73 TCAAAAAAAAAAAAAG---TATATATATATATATATATATATATATATATATATATAAAATTGCATGGGGATATAT chr4 + 94230402 85548418 85548417 85548490 85548418 85548417 85548490 73 TCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGA---CATGGATATCCAT ................---.....:...:.:.:.::...:..........x.....x.:.---.....:x..x:.. 16M3I41M3D13M 56/70 80.0% 73/94230402 0.0% 6/70 8.6% 27205678 NA +3218 chr4 + 190214555 112754097 112754096 112754192 96 CAAAAAAAAAAAAAGTATATATATATATATATATATATATATATATATATAT------AAAATTGCATGGGG---ATATATAAAACAGCTTTCCAGTTGTTCACA chr4 + 94230402 51472495 51472494 51472598 51472495 51472494 51472598 104 CACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAAAACAAAATTGCTCTCTA-TTGTTCTCA ..x...::.........x.....:.......x.:.:.......:x..:.:..------....x..x.x.::.---.x.x.:....:x...:..:.-......x.. 52M6I14M3I20M1D9M 70/95 73.7% 104/94230402 0.0% 10/95 10.5% 61281602 NA +3058 chr4 + 190214555 112810115 112810114 112810177 63 AATTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792611 24792610 24792664 24792611 24792610 24792664 54 AATTACTTATGTA---------AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ....x:..:....---------.x...................x:........x......... 13M9D41M 47/54 87.0% 54/94230402 0.0% 9/54 16.7% 88017504 NA +3220 chr4 + 190214555 112810117 112810116 112810180 64 TTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250998 33250997 33251061 33250998 33250997 33251061 64 TTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..........:.:.:.:.......:.:........x.xx.x.xx...x.....x..x....... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 79559119 NA +3490 chr4 + 190214555 112810117 112810116 112810209 93 TTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTGTAGCAATGGGGTTTCA-----CCATGTTGGC chr4 + 94230402 33250996 33250995 33251093 33250996 33250995 33251093 98 TTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAAAGAATATTAATGCCCCATATTGAC ......x...:.:.:.:.:.......:.:........x.xx.x..x...x.....x..x.......::.:x..x:.::.x.:.-----....:...:. 83M5I10M 65/93 69.9% 98/94230402 0.0% 5/93 5.4% 79559121 NA +3168 chr4 + 190214555 112812052 112812051 112812098 47 GCAACGGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAG chr4 + 94230402 88382708 88382707 88382754 88382708 88382707 88382754 47 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAG ....x..........xx.x.........::.:............... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 24429344 NA +3892 chr4 + 190214555 112812985 112812984 112813180 196 ATCTCAGCACTTTGGGAGCCTGATGTGGG---------TGGATCACAAGGTCAGGAGTTCG---AGACCAG---CCTGGCCAACATAGTGAAACCATGTCTCTACTAAAAATAAAAAAATTAGCTGGGCATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTAAGGCAGGAGAATCGCTTGAACCCGGGAGGTAGAGGTTGTGG chr4 + 94230402 76033083 76033082 76033277 76033083 76033082 76033277 195 ATTTGAGGACATTGGGAACCTGATTTGAGGAAGTAGACTGAAAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGT-----TTGGGAAAGTATGTAATGTC-----ATGAAAGGATGAT----ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x..x..x......:......x..:.---------..:.xx.x:...x...:..x:x.---...::..---.....:-----.x.x....x:....xx:xx.-----..:...::..x.x----:..::....--.....x......:...........::.....:..x.xx.x...x.:.........:.:..x.xx:..:...:. 29M9I23M3I7M3I6M5D20M5D13M4D9M2D73M 124/180 68.9% 195/94230402 0.0% 31/180 17.2% 36779902 NA +3473 chr4 + 190214555 112816875 112816874 112816940 66 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..:.--....:.:...........::........x.xx.x...x...........:.:.. 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 36783674 NA +3471 chr4 + 190214555 112861784 112861783 112861847 64 ATTCTTCTTTGTTGAAAACAAACAGGCAAGCAACAAAAATGTGGCTACATAGAGACAGAGAGAG chr4 + 94230402 89306906 89306905 89306969 89306906 89306905 89306969 64 ACTCTTCTTCATTGAAAACAAACAAGCAAACAACAGAAATCAGAAAACATTAAGGCAGATAAAG .:.......::.............:....:.....:....xx.:xx....x:..:....x.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 23554878 NA +3218 chr4 + 190214555 112864892 112864891 112864961 70 CGTGGTGGTGGGCGCCTGTAGCTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--.....:............::........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 36831695 NA +3106 chr4 + 190214555 112874513 112874512 112874584 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATGTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.:......:x::....x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 36841307 NA +3067 chr4 + 190214555 112880016 112880015 112880092 77 TTTATGTTTTTAACCCAGTAGGACACAGACACTCACACACACACACACTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601263 12601262 12601339 12601263 12601262 12601339 77 TTTCTCTTTGTGAGCCATTTATATTTAAATACTGTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...x.x...x.:.x...x.x:x.:x:.:.:...xxx.x..:.x.x.x...................:.......... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 100278753 89935802 +3002 chr4 + 190214555 112885788 112885787 112885831 44 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAT chr4 + 94230402 85974294 85974293 85974337 85974294 85974293 85974337 44 CTCTGTCTTGAAGATTAAAAAAAAAAAAAAAAGAAGAATTAAAT ........::..:.xx................:..:........ 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 26911494 NA +3023 chr4 + 190214555 112890549 112890548 112890587 39 TTCTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 81894515 81894514 81894553 81894515 81894514 81894553 39 TTTTGTGGTTTTTTTTTTCTTTTTTCTTTTGTTTTTGAG ..:...............:......:....x........ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 30996034 NA +3691 chr4 + 190214555 112893867 112893866 112893957 91 TGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCACGAGAATTGCTTGAACCCAGGAGACGGAGGATACAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x......:.........x.::........x.x:.x...x::...........:..x:xx:..x.::..------..x...:..... 73M6D12M 62/85 72.9% 85/94230402 0.0% 6/85 7.1% 36860662 NA +3462 chr4 + 190214555 112915615 112915614 112915697 83 CATGGTGGCATACACCTGTAGTCTCAGCTATTTGGAAGGCTGAGGTGGGAGGAGCCCTTGAGCCTGGGAGGATGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.:...x......::......:...:.........x:xx.x.:...x.....:..::.:..xx.x:.....:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 36882418 NA +3613 chr4 + 190214555 112950504 112950503 112950586 83 CATGGTGGCATGCACCTGTAGCCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x.....::.........::::........x.xx.x...x..........::.:..x.xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 36917307 NA +3096 chr4 + 190214555 112950942 112950941 112951011 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 36917745 NA +3258 chr4 + 190214555 112964550 112964549 112964598 49 TACCACATTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTTGAGACAGAGT chr4 + 94230402 52752929 52752928 52752977 52752929 52752928 52752977 49 TACCACAGCCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAAT .......x::.:.....::....................:.x.....:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 60211621 NA +3166 chr4 + 190214555 112989083 112989082 112989130 48 CTACACTTGATCTTAGCCAAAAGGCTGAGAAGCAATTCAGAGGTAATT chr4 + 94230402 37937487 37937486 37937534 37937487 37937486 37937534 48 CTACACTTGATCTTAGCCAAAAGGACGAGAAGCAATGGAATAATAAtt ........................x:..........xx.:x::..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 75051596 NA +3405 chr4 + 190214555 113001926 113001925 113002027 102 ATTCTCCCTTTTATTTCCACATTCAATTATCTAATGTCTTAAAAATTCCACCTCCTAAGCATTGCTCATCCGTTTCTTTTATTTATTTATTTATTTATTTTT chr4 + 94230402 12852636 12852635 12852734 12852636 12852635 12852734 99 ATTCTTGCTTTTATTTCCACTTTCATTTTTTTATGGTCTTACAATTTCTTCCTGCTGAAGTTTGCTGGT---TTTTTTCAGTTTATTTTGTGACTGAGTTTT .....:x.............x....x..x.:..xx......x..x...:x...x..:.:xx.....x:.---...:..:x:.......xx.x.:.x.x.... 69M3D30M 70/99 70.7% 99/94230402 0.0% 3/99 3.0% 100149290 90065265 +3970 chr4 + 190214555 113020686 113020685 113020768 83 CATGGTGGCATGCACCTGTAATTCCAGCTACTCGGGAGACTGAGGCAGGAGAATTACTTGAACCCAGGAGGTGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:...........:.::..:.....x.xx.x...x:............:..x.xx:..:..... 8M2D73M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 36987489 NA +3407 chr4 + 190214555 113048245 113048244 113048303 59 TGTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .....:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 79797242 NA +3062 chr4 + 190214555 113048247 113048246 113048305 59 TGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ...:.:.:.:.:.......:.:........xxx.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 79797244 NA +3017 chr4 + 190214555 113048256 113048255 113048294 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 88255630 NA +3336 chr4 + 190214555 113076984 113076983 113077059 76 AAGAAAGGAAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGGAAGAAGGAACATGAATAACAA chr4 + 94230402 49044745 49044744 49044820 49044745 49044744 49044820 76 AAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA ........x:...:.x.:...:..:.......x....x.:::..xx:..:xx:......:....x....::..:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 64032239 NA +3102 chr4 + 190214555 113097816 113097815 113097910 95 GATAAATTTTCCTCTTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACACATATATATG chr4 + 94230402 39937158 39937157 39937252 39937158 39937157 39937252 95 GATAATTTGGGTTTTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCATTTG .....x..xxx:.:.xx...............::...x......::xxx.x..:...:xxx..:.....:...:.:::...:.x.::.::..x.. 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 73160658 NA +3252 chr4 + 190214555 113097828 113097827 113097913 86 TCTTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATA--TATGCACACACACACACACGCACACACACATATATATGTAT chr4 + 94230402 85834528 85834527 85834615 85834528 85834527 85834615 88 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:..x...x:..x.....x.................:.xx..:..--:..:..:.:::.x.:...:.:x:.::....:...:.:::.. 45M2I41M 57/86 66.3% 88/94230402 0.0% 2/86 2.3% 27263300 NA +3520 chr4 + 190214555 113097828 113097827 113097907 80 TCTTGTATATATATGTGTGTGTGTGTGTGTGTG------TGTGTGTATATATATGCACACACACACACACGCACACACACATATAT chr4 + 94230402 85834530 85834529 85834615 85834530 85834529 85834615 86 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:..:.x:..x.:...x................------...:x.:...:.....:.x.:...:::x:.:.......:...:.:.. 33M6I47M 57/80 71.2% 86/94230402 0.0% 6/80 7.5% 27263298 NA +3134 chr4 + 190214555 113097829 113097828 113097882 54 CTTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACA chr4 + 94230402 27325510 27325509 27325563 27325510 27325509 27325563 54 CCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA .:..x.:x..x..:...........:.........::...:.......x.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 85772319 NA +3905 chr4 + 190214555 113097830 113097829 113097958 129 TTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACACATATATATGTATATATACACACACACACAAATCATAAATGTGCTTGTGTATATATAA chr4 + 94230402 85834528 85834527 85834645 85834528 85834527 85834645 118 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAAT--------ACATGTTTATGCACACATACACACATGGCC---TGGGGAATTTTCTTCTGTATGTACAA ..x.x...x:..x.....x.................:.xx..:..x...:...:.:::.x.:--------....:.x....:.:.:.........::xx.---.x:x:...x.x...x.....:..:.. 62M8D30M3D26M 82/118 69.5% 118/94230402 0.0% 11/118 9.3% 27263302 NA +3377 chr4 + 190214555 113097841 113097840 113097923 83 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACA--------CACATATATATGTATATATACACAC chr4 + 94230402 79265520 79265519 79265609 79265520 79265519 79265609 90 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC ............::........xx........:..:...:::::.....:.:x...:.--------....-.:.:x.x......x.::... 58M8I4M1D20M 60/82 73.2% 90/94230402 0.0% 9/82 11.0% 33832321 NA +3561 chr4 + 190214555 113097842 113097841 113097925 84 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACACATAT-------ATATGTATATATACACACAC chr4 + 94230402 79265519 79265518 79265609 79265519 79265518 79265609 91 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC .............::........xx.:......:::....:::::........x...:.:x.:.-------.:.:x.x......x.::... 64M7I20M 59/84 70.2% 91/94230402 0.0% 7/84 8.3% 33832323 NA +3599 chr4 + 190214555 113097844 113097843 113097933 90 GTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACACATATATATGTATATATACACACACACACAAAT chr4 + 94230402 79265519 79265518 79265605 79265519 79265518 79265605 87 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA---ACACCTCTATATAAAT .............::........xx.:.....:..:....:::::...:.:..x...:..x.:.:.x:.:.---....x:x:.:.:.... 71M3D16M 59/87 67.8% 87/94230402 0.0% 3/87 3.4% 33832325 NA +3138 chr4 + 190214555 113097849 113097848 113097930 82 TGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACACATATATATGTATATATACACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAA--------ATACATGTTTATGCACACATACACACA .....x.............:.:...xx::::.x:..:...:.:.:.x--------...:....x...::.....:....... 47M8D27M 53/74 71.6% 74/94230402 0.0% 8/74 10.8% 27263308 NA +3300 chr4 + 190214555 113097850 113097849 113097898 49 GTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACA chr4 + 94230402 68837095 68837094 68837143 68837095 68837094 68837143 49 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:.............:.:.:.x::...:...:.....:....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 44260755 NA +3088 chr4 + 190214555 113097852 113097851 113097896 45 GTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACA chr4 + 94230402 49483587 49483586 49483631 49483587 49483586 49483631 45 GTGTGTATGTGTTTATAAATACATGCACACACACACGCACGCGTA ......:.....x.:..x...:..............:.....::. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 63614265 NA +3009 chr4 + 190214555 113097856 113097855 113097897 42 GTGTGTGTGTGTATATATATGCACACACACACACACGCACAC chr4 + 94230402 36111767 36111766 36111808 36111767 36111766 36111808 42 GTGTGCCTGTGCGTATATATACACACACATACACACGTACAC .....:x....::.......:........:.......:.... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 76986089 NA +3533 chr4 + 190214555 113131083 113131082 113131166 84 AAAAACTGTAACAGTTTTTAATGAATAGTTTTATTAACTACTAATCCTCCTGTTTTCAATTCAAATTTCCTAGTCTTTGTAGAG chr4 + 94230402 90979938 90979937 90980021 90979938 90979937 90980021 84 AAGACTTCTAATGGTTTGTAAGAAATTGTGCTATTTGCCACTGTCCCTCCTGTTTTCAATACAAATTACTTGCTCTTCCCAGAG ..:.x:.x...::....x...x:...x..x:....x:.:...:x:...............x......x.:.:x....:x:.... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 22151145 NA +3043 chr4 + 190214555 113149872 113149871 113149920 49 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGATTGAAAGAAGAGAA chr4 + 94230402 90256085 90256084 90256133 90256085 90256084 90256133 49 CTTCAAGAGAAAAATAAAAGAAAAAAAAAGAAAGGTTCAAAGAACAGAA ..:x..:.:.....x....:..............:..x......x.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 22893787 NA +3393 chr4 + 190214555 113152637 113152636 113152704 68 AGAAGTATACGTGTAATTCCAGCAATTTGGGAGGCTGAGGCAGGAGGATCACTTGTGCCCAGGAGTTT chr4 + 94230402 76033200 76033199 76033267 76033200 76033199 76033267 68 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ..x:..::.......:.......x.:...::........x.xx.x.:.x......x:.....:..:.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 37119437 NA +3255 chr4 + 190214555 113221519 113221518 113221588 70 CATGGTGGCACAGGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..x.--....:.:.........::.:........x.xx.x...x.:.........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 37188322 NA +3007 chr4 + 190214555 113233082 113233081 113233139 58 AGAGTATATGGGCTTGGCTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72435618 72435617 72435675 72435618 72435617 72435675 58 AAAGTTGATGGGGTTGGGTTTTCTGGGGTTTTTCATATTTGTTTTTTTTTTTTTTTTT .:...xx.....x....x.......xxx.....:x.x...x................. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 40797464 NA +3387 chr4 + 190214555 113233094 113233093 113233160 67 CTTGGCTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 + 94230402 15853491 15853490 15853557 15853491 15853490 15853557 67 CCTGACTTCGCTGTTTTTTGTTGTTGTTTTTTGTTTTCTGTGGTTGTTTTTTTTTTTTTGAAGAGGA .:..:...:x.........x..x..x......x....:.x.xx..x...............::x... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 97379603 92834952 +3052 chr4 + 190214555 113233097 113233096 113233155 59 GGCTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 42679535 42679534 42679593 42679535 42679534 42679593 59 GGTTTTCCTGCTTGTTTTTTTTTTTTTCCCCCTCTTTTTCCTCCATTCTTCTTTTTGGG ..:...:...:..x.............:::::.:.....::.::x..:..:......:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 70553562 NA +3412 chr4 + 190214555 113261913 113261912 113261994 82 CGTGGTGGTGGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCAAAGAGGTGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:::......x.:.--....:.:...........::........x.xx.x...x..........x.::..x.xx:..:..:. 14M2D66M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 37228716 NA +3521 chr4 + 190214555 113263048 113263047 113263130 83 CATGGTGGCGGGCACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTATTGAACCCGGGAGGCTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x.:..:.:...........::........x.xx.x...x.xx........:.:..x:.x:.....:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 37229851 NA +3540 chr4 + 190214555 113264593 113264592 113264664 72 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCTGGAGGTGGAGGTTGTGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.xx.x...x.:.........x.:..x.xx:..:...:. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 37231387 NA +3022 chr4 + 190214555 113267229 113267228 113267277 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 60486767 NA +3244 chr4 + 190214555 113299570 113299569 113299647 78 TGGTGCACACCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:--....:.:.......:...::........x.xx.x...xx:........::....x:xx:..:..:.. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 37266368 NA +3096 chr4 + 190214555 113305200 113305199 113305269 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 37272003 NA +3232 chr4 + 190214555 113309489 113309488 113309545 57 AGGTGGTTTTTTTGTTTGTTTGTTTGCTTGTTTGTTTTTTGTTTTTTTGAGACAGGG chr4 + 94230402 28946005 28946004 28946061 28946005 28946004 28946061 57 AGATGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTTGGACTGAG ..:...x...................:.x.x:.x......x.......x:...x.:. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 84363484 NA +3195 chr4 + 190214555 113326535 113326534 113326630 96 TTTATATCTTCCAATATTTTTATTTCTTTCTTGACATCTTTCTGTTTTACTTTCTTCTCTCTCTTCTCTTTCTCTTCTAA----AGAAAATTTCCTCACT chr4 + 94230402 71957411 71957410 71957510 71957411 71957410 71957510 100 TTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCTTGTAGGATCAGTACTTTTTCCCACT ..:..xx..:.:xx..x.:...x:xx..:......x.x..:.x.x...x....:..:.......:...........x..:----..x.xx...:.:.... 80M4I16M 66/96 68.8% 100/94230402 0.0% 4/96 4.2% 41369124 NA +3284 chr4 + 190214555 113362414 113362413 113362471 58 GTAATGGTTTTTTGTTTGTTATTTTGTTTTTGTTTTGTTTTGTTTTACAGAGACAGGA chr4 + 94230402 56840377 56840376 56840434 56840377 56840376 56840434 58 GTGGTAGTTTTTTGTTTGTTTGTTTGTTTTGTTTCTGTTTTTCTTCACAGAGACCAGA ..::.:..............xx........xx..:......x:..:........x:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 56522037 NA +3599 chr4 + 190214555 113380523 113380522 113380604 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCCAGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::........x..x.x...x.:.........:.:..x:xx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 37347322 NA +3037 chr4 + 190214555 113394325 113394324 113394414 90 TTCTTTCTTGCCCCTTCCTTCCTCCCTCCCTCCCTCCCTCTCCTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCCTTCC chr4 + 94230402 37521438 37521437 37521527 37521438 37521437 37521527 90 TTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCTTGATTTCCTTTTTTTCCCCCCCCCCTTTTTTTTTTTTCC ..........:..:..:x.x.:....::.::..::.:x.x.x:.x:..:...xx..:.:.::..:.::..::..::::..:...::.... 90M 52/90 57.8% 90/94230402 0.0% 0/90 0.0% 75872887 NA +3364 chr4 + 190214555 113394455 113394454 113394520 66 CTTTCTTCCTCTTTCCCTCCTTCCTTCATTTCTTCTTT----GTTTGTCTTTCTTCTTTATCTTCTCTTT chr4 + 94230402 82044089 82044088 82044158 82044089 82044088 82044158 70 CTTTCTTCCCCTTTCCCTTCCTCCTGCATTTCTTCTCTTCTGTTTTGCCTCCCTTTACcttcctcccttt .........:........:.:....x..........:.----x....:..::...:x::x..:..:.... 38M4I28M 50/66 75.8% 70/94230402 0.0% 4/66 6.1% 31350366 NA +3932 chr4 + 190214555 113399292 113399291 113399404 113 CACATGTATACACACACATATCCCACACATACACGTACACATACACACAAATACA----------------CATATACATATACATGCCTGCATATACACACAAACACACACATATACATACACACACT chr4 + 94230402 68837026 68837025 68837145 68837026 68837025 68837145 120 CATGTGtatatacatacatac---------atacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATT ..::......:...:.....:---------.:..x......:....:...:xx..----------------:.x:x..:.:.:.:..:x..::.:..........:...:.....:....:......:. 21M9D25M16I58M 74/104 71.2% 120/94230402 0.0% 25/104 24.0% 44562266 NA +3149 chr4 + 190214555 113419239 113419238 113419311 73 TGTGCCTGGAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCTCAGGAGGTCAAGACTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x..x...............::........x:xx.x.:.x::.....:.:...:..x.:x:.:...:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 37386034 NA +3267 chr4 + 190214555 113422981 113422980 113423068 88 TGTTTTAAGTTATGCAAGCCTAGTCATAATGTCTGTTTTGTGTGTGTGTGTATATATATATATATATATACATATACATATTTGTATG chr4 + 94230402 69010422 69010421 69010509 69010422 69010421 69010509 88 TGTTTTAAAATATGCAAGACTATGTATGCTCTTCCTCTAGCATTGGTGTCTACATAAATATATATGAATATATTTATATTGTTGTATG ........:x........x...xx:..:x.x.::x.:.x.::.xx....x..:...x........:x...:..x..:..xx....... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% 44412559 NA +3043 chr4 + 190214555 113423014 113423013 113423048 35 TGTTTTGTGTGTGTGTGTATATATATATATATATA chr4 + 94230402 41215468 41215467 41215502 41215468 41215467 41215502 35 TGTTTTGTGTGTGTGTGTATATATATAGATATATA ...........................x....... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 72207546 NA +3339 chr4 + 190214555 113431443 113431442 113431514 72 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCGCTTCAACCTGGGAGGTGGAGGTTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....x....:.:...........::........x.xx.x...x.:...x....::.:..x.xx:..:..:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 37398238 NA +3374 chr4 + 190214555 113443878 113443877 113443997 120 TTTCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCTTCCTTCCTTCTTTTCTTTCTCTCTCTCTCTCCTTCCT chr4 + 94230402 49829809 49829808 49829928 49829809 49829808 49829928 120 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTT .......:.x::...:..xx.xxxxx..::x:.....x.xx...x.:...x:::x...........:.......:........::.::..::.:.::..:x.x.x.x.x..:.x:..::. 120M 72/120 60.0% 120/94230402 0.0% 0/120 0.0% 63614069 NA +3035 chr4 + 190214555 113443884 113443883 113443923 40 TTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTTTCTTTT chr4 + 94230402 37318514 37318513 37318553 37318514 37318513 37318553 40 TTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTCT ....x...:............:........:.......:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 76125370 NA +3498 chr4 + 190214555 113443916 113443915 113444046 131 TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCTTCCTTCCTTCTTTTCTTTCTCTCTCTCTCTCCTTCCTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874867 48874866 48874992 48874867 48874866 48874992 126 TCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATT-----TTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .:...:.....:x:x.x.:.....:.x.xxx....:x..-----......::x...::.x:..x...:...:.x..:x.:x:...:.......x:.....:.x....::xx.x...x.x...:.:.::... 39M5D87M 79/126 62.7% 126/94230402 0.0% 5/126 4.0% 64569049 NA +4199 chr4 + 190214555 113443971 113443970 113444138 168 TTTTCTTTCTCTCTCTCTCTCCTTCCTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTT-----------------TCTTTCTTTCTTCTTTCTTTCTTTCTCTTTTTCTTCTGCTAGTACCCATATAACAAAAATAACAGCT chr4 + 94230402 50176266 50176265 50176443 50176266 50176265 50176443 178 TTTTCTGTCTCACT-GCTCTCCTTTCTTCCTTTATCCGCC-----CACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTC-CTCCATTCTTCACATATCCCTTACACAGACATTACAGCT ......x....x..-x........:...:....x..:x:.-----.x:.:..x.x..x..::..::x......x.x.::x.:...x.:.............-----------------.:..::.x...:...::..........-:.::x....x.xx:..:..x.xxx...:.x..x...... 14M1D25M5D56M17I27M1D39M 110/161 68.3% 178/94230402 0.0% 24/161 14.9% 63267705 NA +3862 chr4 + 190214555 113443987 113443986 113444101 115 CTCTCCTTCCTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTTCTTTCTTTCTTTCTTT---CTTTCTTCTTTCTTTCTTTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x:.:.::.:.....:xx.x:.........:....:.:x..::.:.x....xx.....x.:.-----....x:...:.:x.xx.......:.---..:.:.........:....:.x... 65M5I25M3I25M 78/115 67.8% 123/94230402 0.0% 8/115 7.0% 49746870 NA +3596 chr4 + 190214555 113443996 113443995 113444105 110 CTTTCTTTCTCTTTCTTTC-----TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTTCTTTCTTTCTTTCTTTCTTTCTTCT---TTCTTTCTTTCTCTTTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:::..:.-----.:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x....:.:x.xx.......:..::..---.........:..:...x.:. 19M5I41M5I30M3I20M 77/110 70.0% 123/94230402 0.0% 13/110 11.8% 49746879 NA +3024 chr4 + 190214555 113444011 113444010 113444107 97 TTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTTTCTTC chr4 + 94230402 49829809 49829808 49829905 49829809 49829808 49829905 97 TTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCC .......:.xx..:..::xx.xxxxx..:.x..:.:.x.xx...x:....x:::x...........:...........:....:..:.:::::..:. 97M 60/97 61.9% 97/94230402 0.0% 0/97 0.0% 63614202 NA +3717 chr4 + 190214555 113470509 113470508 113470580 72 GCACATGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATCACTTGAACCCGGTAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:......:.........:.::..:.....x.xx.x...x...........:.x..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 37437303 NA +3312 chr4 + 190214555 113520899 113520898 113520982 84 TGCACAGCTAGTCCCAGCCACTTGGGAGGCTGAGGTGGGAAGATCACTTGAGCCCAGGAGTTCGAGGCCACAGTGAACCATGAT chr4 + 94230402 76033205 76033204 76033285 76033205 76033204 76033285 81 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT---GTAGAACATGAT .....:xx....:.....:.....::........x:xx.x::.x.......:.....:..:.:x:...:---..::.x...... 69M3D12M 56/81 69.1% 81/94230402 0.0% 3/81 3.7% 37487694 NA +3049 chr4 + 190214555 113523833 113523832 113523891 59 AAACAGATCTTTTTTTTTGTTGTTTTTTTGTTTTGTTTTGTTTTTTAAAGACAGGGTCT chr4 + 94230402 49868854 49868853 49868912 49868854 49868853 49868912 59 AAAAAGACTTTCAGTTTGGGTGTTTTTTTGTTTTGTTTTGTTTTTTTGATGCAGGCTTT ...x...::..:xx...x.x..........................x:.x:....x.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 63654979 NA +3026 chr4 + 190214555 113526414 113526413 113526463 50 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCATGTATGCACATGT chr4 + 94230402 63659729 63659728 63659778 63659729 63659728 63659778 50 ATGTGTACTTGTGCCTGTGTGTGTGTGTCTGGATGCATGCATACAAATGT ......::x....:x.............x..x.......:..:..x.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 49866685 NA +3216 chr4 + 190214555 113644979 113644978 113645031 53 CTGTACTGAGAATTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTTTGTTT chr4 + 94230402 90203129 90203128 90203181 90203129 90203128 90203181 53 CTGAATTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTT ...x.:.....:x.....x..............x....x....x.....x... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 23441850 NA +3884 chr4 + 190214555 113689106 113689105 113689188 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::........x.xx.x...x::...........:..x:xx:.....:.. 9M2D72M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 37655909 NA +3139 chr4 + 190214555 113734894 113734893 113735000 107 GGAAAAAAAAAAAAAAAGAAGCAGAAAAATCAACCCAAATGATCTAAAACATTTTACTATCTTACATGGCAAACTTCTAAATTTATAATCACCAAATGAGTAAAACA chr4 + 94230402 64343831 64343830 64343933 64343831 64343830 64343933 103 GGAAAAAAAAAAAAAAAGAGGCAGAAAAAAAAACCAGGCAGAATTCAAACATTTCTTTTAATTACCTTTCTAA---CTGAATTT-TAATTAATGTTTAAAGAAAACA ...................:.........xx....x::xx..x:.x........:x:.xxx....x.xx.x..---..:.....-....:.x::xx.:.:x...... 73M3D8M1D22M 72/103 69.9% 103/94230402 0.0% 4/103 3.9% 49391063 NA +3010 chr4 + 190214555 113746943 113746942 113746994 52 CATCAACCAAAAAAAAAAAAAATCTACCATTAATAATATATATATATATATA chr4 + 94230402 64868665 64868664 64868716 64868665 64868664 64868716 52 CATAAAGGAAAAAAAAAAAAAAGCTACCTCCAGTAATACTTATATATATATA ...x..xx..............x.....x::.:.....:x............ 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 48878278 NA +3032 chr4 + 190214555 113782280 113782279 113782331 52 CTTCCCTTCATAGACCCTCATTCCTCCCCCTAAAAAAAAAAAAAAACCCAAA chr4 + 94230402 63496515 63496514 63496566 63496515 63496514 63496566 52 CTATCTTCTGTCAACCCTCCCCCCCCCCCCCAAAAAAAAAAAAAAACCCAAA ..x:.:.:::.x:......x::..:.....:..................... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 50285765 NA +3007 chr4 + 190214555 113809071 113809070 113809120 50 TAAAAAAATTTTTTTAAAATTATATGTGTGTATGTATATATATATATGTA chr4 + 94230402 21429697 21429696 21429746 21429697 21429696 21429746 50 TATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTA ..x...x:...:...x::x......:.....:.................. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 92379374 NA +3389 chr4 + 190214555 113809149 113809148 113809226 78 CTTCCATTATCCAATTTAGACGTGACCTAAATAACTCCAATCAAAAGAGCAAAAAAAAAAAAACAAAAAAAAAAAACA chr4 + 94230402 71383004 71383003 71383079 71383004 71383003 71383079 76 CTGCCAGTCTTCGATGTAGAAATAA--TGAATAACTCCAGTCTAATGAGAAAAAAAAACAAAACAGAAAAAGATAATA ..x...x.x.:.:..x....x:.:.--.:..........:..x..x...x........x......:.....:.x..:. 25M2D51M 57/76 75.0% 76/94230402 0.0% 2/76 2.6% 42426145 NA +3055 chr4 + 190214555 113809183 113809182 113809235 53 CTCCAATCAAAAGAGCAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCC chr4 + 94230402 11702793 11702792 11702844 11702793 11702792 11702844 52 CTCCTACCAAAC-AGGAAAATAGAAAGAGCAAAAAAAAAAAACAAAAAAACCC ....x.:....x-..x....x.:...:.:........................ 12M1D40M 44/52 84.6% 52/94230402 0.0% 1/52 1.9% 102106390 88108165 +3188 chr4 + 190214555 113809196 113809195 113809262 67 AGCAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCCCTTCTCAAAGAAAAAAAAAAACTAAAA chr4 + 94230402 72872064 72872063 72872130 72872064 72872063 72872130 67 AACAGCAAAAAAAAAACCAAAAAAAAAAACCAAAAACCCTGCTTCCTGAGAAAATGCCAAATTAAAA .:..:x...........x............x.....x..:x:.::.x:......x:xx...:..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 40937132 NA +3358 chr4 + 190214555 113809199 113809198 113809246 48 AAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCCCTTCTCAAAGA chr4 + 94230402 60349511 60349510 60349558 60349511 60349510 60349558 48 AAAAAAAAAAAAACAAAAAAAACCAACAACAAAACCTCTTCTCATAAA ......................xx.....x......:.......x.:. 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 53459688 NA +3403 chr4 + 190214555 113814882 113814881 113814953 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGCGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x.x:.x...x.:........::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 37781676 NA +3126 chr4 + 190214555 113815007 113815006 113815056 50 TCTCAAAACTAAATAAACAAACAAACAAACAAACAAATAAATAAATAAAA chr4 + 94230402 54497867 54497866 54497916 54497867 54497866 54497916 50 TCTCAGAGCTAAATTAAAAAACAAACAAACAAACAAGCAGAAAAATGGAA .....:.:......x..x..................::.:.x....::.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 59317140 NA +3100 chr4 + 190214555 113826094 113826093 113826141 48 AGCAGGAAAAACAAAACAAATAAACAAAGCAATGCCAAAACAAAAACC chr4 + 94230402 17043007 17043006 17043054 17043007 17043006 17043054 48 AGCAAAAAAAACAAAACAAACAAACAAAAAAACCCCAAAACGACAACC ....::..............:.......:x..:x.......:.x.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 96783087 93431468 +6619 chr4 + 190214555 113840044 113840043 113840239 196 TTGAAAAATGGCAACAAATGAAAGTGTCAGCATCTTTAGTTCAGCATCCTTGGCTGTGGAGTATGTAGATTCACTTTCACCTGAGAATCCTCTGCAAGAACCATTTTAAAATGCGTGGAACTATATGCATTTTATATGAAATAAAATAAAATGTATAATTACATGTTGAATAACTATACAAAGTTCCAAACTGCAA chr4 + 94230402 24971053 24971052 24971210 24971053 24971052 24971210 158 TTGAACGATGGCAGTGAACGACAGCGTTAATATCTTGAACTCTGCTTATCTGGCAGTGGAATACATAGACTCTTTCCTGCCTGACAATCCTCTGCAGCAGCCATTTAAAAATGCTTGG--------------------------------------AATTACATGCTGGACAACTACACCAAGTTCCAAATAGCGA .....x:......:::..:..x..:..:.::.....x.::..x..x.x::....x.....:..::....:..x:.::::.....x...........:x.:......x.......x...--------------------------------------.........:..:.:.....:..x..........:x..:. 118M38D40M 114/158 72.2% 158/94230402 0.0% 38/158 24.1% 88868991 NA +4521 chr4 + 190214555 113864263 113864262 113864414 152 GACTTTGGATAAGTTACTTAACCTCTCTGTTTCTCAGTTTCTTCTTTAGTAAAAAGGGGATAATAATAG-TACCTATTACACAGCGTTGTTGAGAG----AATTAATTTATATATATAAAGTAT-TTAAAAGGGAGCCTGGCACATTGTATTATGAGT chr4 + 94230402 83501141 83501140 83501293 83501141 83501140 83501293 153 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGTTTATTCAGGATCTTCAGAGTGA-----GTACATAATATTAGTAGT ....:...::..:...........x.x...x:........:::.x::x......x..:.x.:...:..:-......::x.....x.x.:...x...----...:....:x.:.x...xx..x..-..x.:..x..-----.:....x:.....xx... 69M1I26M4I24M1I10M5D18M 103/147 70.1% 153/94230402 0.0% 11/147 7.5% 30363122 NA +3152 chr4 + 190214555 113889704 113889703 113889765 62 AACAAAAGTGAAATTCCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAACAGAAAC chr4 + 94230402 31996630 31996629 31996691 31996630 31996629 31996691 62 AATAAAGGGGAGGCTTTTTGAAAAAAAAACAAAAAAAAAACAAAAAACCACCAAAGAGAAGC ..:...:.x..:::.::x.:.........x..........x.........xx...x....:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 81893074 NA +3047 chr4 + 190214555 113894009 113894008 113894139 131 TATATGTATATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGTATATATATGTATATATATAGACGTATATATATATGTGTATATATATATATGTGTGTGTGTGTGT chr4 + 94230402 91734567 91734566 91734697 91734567 91734566 91734697 131 TATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ...:x.x::.....x..:...x.x:x....xxx::....:x:...:.x.x:x...:x.xx...:.x...::........xx...x...x..x..:.x.x..:::..:.x.x.:....:::..x..:.:.:. 131M 77/131 58.8% 131/94230402 0.0% 0/131 0.0% 22159442 NA +3424 chr4 + 190214555 113894048 113894047 113894153 106 GTGTATATATATGTATATATA-TATGTGTATATATATGTATATATATAGACGTATATATATATGTGTA--------TATATATATATGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812946 89812945 89813060 89812946 89812945 89813060 115 GTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ..x.....:.xx..:.x.:.:-:..:.:x...x......:.....x..:.:.:x.xx...:.....:.--------.:::...:.x:x...................:.x..x.. 21M1I46M8I39M 73/106 68.9% 115/94230402 0.0% 9/106 8.5% 24081102 NA +3751 chr4 + 190214555 113906679 113906678 113906771 93 GCTCCACTGCTTATT-ACCTGTATGGTTTTGGG-AAGT-ACTTAATCCCTCTGAT-CCTCAGTTTCCTCATCTGTAAAATAGGGATAATAATACATA chr4 + 94230402 13242454 13242453 13242548 13242454 13242453 13242548 95 GCTCTGCCACTGACTCACCTGT--GACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTA ....::.::..x.:.-......--.:::.....-....-..x..::.:....:..-...........:...................x..x...x.. 15M1I6M2D9M1I4M1I16M1I41M 73/91 80.2% 95/94230402 0.0% 6/91 6.6% 100664225 89550330 +3132 chr4 + 190214555 113947350 113947349 113947422 73 TGCACCTGTGGTCCCAGCTGCTTGGGAGGTTGAGGCACGAGAATCGTTTGAATTTGGCAGTTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:......:....::...:....x.x:.x...x.::.....::::.x..:.xx:..:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 37914145 NA +3935 chr4 + 190214555 113948053 113948052 113948131 79 GTGGTGCACACATGTAGTTCCAGCTACTTGGGAGGCTGAGGCACAAGAATCTCTTGAATCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--..................::........x.x::x...x.x......:....:..x.xx:..:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 37914852 NA +3124 chr4 + 190214555 113972291 113972290 113972345 55 TGGAAAAAAAAAAAAACAAAAAAAAAAACCCCACCATGATTTTCATCCCTATTTA chr4 + 94230402 43466410 43466409 43466464 43466410 43466409 43466464 55 TGGAAAAAAAAAAAAAAAAAAGCAAAAACCCCACAATAATTTCACTCCATGCTCA ................x....:x...........x..:....:xx...x.::.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 70505881 NA +3194 chr4 + 190214555 113972294 113972293 113972331 38 AAAAAAAAAAAAACAAAAAAAAAAACCCCACCATGATT chr4 + 94230402 36819386 36819385 36819423 36819386 36819385 36819423 38 AAAAAAAAAAAAACAAAAAAAAACACCTCACCATGATT .......................x...:.......... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 77152908 NA +3146 chr4 + 190214555 114158177 114158176 114158228 52 CTCAAAAAACAAACAAACAAACAAACAAAACAAACACAAACAAA----CAAAAAAA chr4 + 94230402 62839915 62839914 62839970 62839915 62839914 62839970 56 CTCAAAAAACAAACAAAAAAACCACCAAAACAAACAAATACAAAATACCAAAGAAA .................x....x.x...........x.x.....----....:... 44M4I8M 46/52 88.5% 56/94230402 0.0% 4/52 7.7% 51318262 NA +3245 chr4 + 190214555 114164943 114164942 114165015 73 TGCACCTGTGGTCCCAGCTACTCGAGAGGCTAAGGCAGGAGAATTGGTTGAACCCCGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:.........:..:.....:..x.xx.x...x::x........x.:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 38131738 NA +3273 chr4 + 190214555 114197320 114197319 114197427 108 GTTTGTCAATTTTGTTTAACTTTTTTTTAAAAAAAAAACAAGTTTTGTGTCATTAATCTTTTGTATTGTTTT--CTTCATTTCAATTTTATCTCTTTCTACTATAATTTT chr4 + 94230402 31162478 31162477 31162586 31162478 31162477 31162586 109 GTCTGACAATTTTGCTTGCCTTTTTTTTAAAACAAAAACAAGCTGAGGTCTACTTGTCTTACATGTTGTCATGGTTTTGGCTCTTTCGTATCCATTTC-ACCATGGTTTT ..:..x........:..:x.............x.........:.xx.xx::.:.x:....x::.:....:x.--:..::x:..xx.:x....:x....-..:..::.... 72M2I24M1D11M 71/107 66.4% 109/94230402 0.0% 3/107 2.8% 83034842 NA +3300 chr4 + 190214555 114204199 114204198 114204279 81 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAAAATCGCTTGAACCTGGGAGGTGGAGGTTG-----CATGGAGCCGAG chr4 + 94230402 76033206 76033205 76033291 76033206 76033205 76033291 86 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ....x....:.:...........::........x.xx:x:..x.:........::.:..x.xx:..:..-----....:x...:.. 69M5I12M 57/81 70.4% 86/94230402 0.0% 5/81 6.2% 38170993 NA +3305 chr4 + 190214555 114207475 114207474 114207582 108 TATATATATATATATATATATATATATATATGGAGAGAGAGAGGGATAATTCTTTATCTGAAATGCTTGGGACCAGAAGTATTTCAGATATTAGATTTTTTTGGATTT chr4 + 94230402 27005996 27005995 27006078 27005996 27005995 27006078 83 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG---------------------CTTTGGGTACAACAGTGTTTTGAATA----ACTTTTCCAGATTT ...........x.......x.....:...x.............---------------------x:.....xx..:x...:...:::...----.:....:::..... 43M21D26M4D14M 65/83 78.3% 83/94230402 0.0% 25/83 30.1% 87201479 NA +3682 chr4 + 190214555 114235428 114235427 114235538 111 TGTGTGTGTGTGTGTGTGTGCGCGTGTATATATATATACACACACATATGTACACGCACACATATATATGTCTATGTATATATATGTGTGTGTATATATATGTGTGTGTAT chr4 + 94230402 5214211 5214210 5214321 5214211 5214210 5214321 111 TGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ....:x::..x.:::.::.x..:....::::.x:.:.x::......:..x...::.:.::...x.::....x.:..:::.x.::........:..::.x.......:::.. 111M 64/111 57.7% 111/94230402 0.0% 0/111 0.0% 109021217 81193338 +3022 chr4 + 190214555 114235452 114235451 114235501 50 TGTATATATATATACACACACATATGTACACGCACACATATATATGTCTA chr4 + 94230402 58675396 58675395 58675445 58675396 58675395 58675445 50 TGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA .....::.......:....x.......:...:.....x:.x....:.:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 55560056 NA +3216 chr4 + 190214555 114235467 114235466 114235534 68 ACACACATATGTACACGCA--CACATATATATGTCTATGTATATATATGTGTGTGTATATATATGTGTGT chr4 + 94230402 22600198 22600197 22600267 22600198 22600197 22600267 70 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGT ..........x:...:...--.....::...::xxx..:.:.....x.............::...:::.. 19M2I49M 50/68 73.5% 70/94230402 0.0% 2/68 2.9% 91635269 NA +3158 chr4 + 190214555 114239267 114239266 114239333 67 GCAAACAGAAAAGATTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTTCCTTTTTTTTTTCTTTTTTT chr4 + 94230402 86518982 86518981 86519048 86518982 86518981 86519048 67 GCCATCAGACTGTAGTTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCT ..x.x....xx:x.x..:.:..........:..:x:...xx.::....:................:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 27720285 NA +3101 chr4 + 190214555 114239287 114239286 114239332 46 TCCCTCCCTCCCTCCCTTCCTTCCTTTCCTTTTTTTTTTCTTTTTT chr4 + 94230402 53757812 53757811 53757857 53757812 53757811 53757857 46 TCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ....:...:...:...:.....::...:.:.......:.:...... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 60481475 NA +3029 chr4 + 190214555 114251040 114251039 114251100 61 TCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATAAAAAAAGAGAAACAT chr4 + 94230402 55094094 55094093 55094154 55094094 55094093 55094154 61 TCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAACACAAAGAT ..:x.::..x..::.x............:...........x.:..x......x.x...x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 59156946 NA +3054 chr4 + 190214555 114329429 114329428 114329512 84 TTGTTTGGTTCAACAGCTCAACAGTATCATTGGGGACATGGTGACTTTTTCTTTTCTTCCTTTTTTTCTTTTCTTTTTATTTTT chr4 + 94230402 87790112 87790111 87790195 87790112 87790111 87790195 84 TTTTCTGGGTAAATTAGCAAACAGCATCACTGGTGTCATCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTCCTTTTTCTTTTT ..x.:...x.x..:x:x:x.....:....:...x.x...xx:x.::.::::::...:..........:...:......x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 26539317 NA +3105 chr4 + 190214555 114329429 114329428 114329514 86 TTGTTTGGTTCAACAGCTCAACAGTATCATTGGGGACATGGTGACTTTTTCTTTTCTTCCTTTTTTTCTTTTCTTTTTATTTTTTA chr4 + 94230402 87791808 87791807 87791893 87791808 87791807 87791893 86 TTTTCTGGGTAAATTAGCAAACAGCATCACTGGTGTCATCTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTA ..x.:...x.x..:x:x:x.....:....:...x.x...xx:x.::.::::::...:..........:.....:....x:...... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 26537621 NA +3034 chr4 + 190214555 114352033 114352032 114352075 43 TACTCCAGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTTTTG chr4 + 94230402 29671942 29671941 29671984 29671942 29671941 29671984 43 TACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTG ...x.:x......x...x......................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 84680091 NA +3055 chr4 + 190214555 114352040 114352039 114352087 48 GTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTACTTAGA chr4 + 94230402 11049731 11049730 11049778 11049731 11049730 11049778 48 GTTTTTTTTTGTTGTTGTTTCTTTGTTTATTTTTTGTCTCTGTTTAAA .....x.......x......x.......:........:.:.::...:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 103302309 86912246 +3020 chr4 + 190214555 114353588 114353587 114353671 84 CTTTTCATTTTGTTGATCTTTTGTATTGTTTTCTTAATTTTAAATTAATTTATTTCTGTTCTGATCTTAATTATTTCTTTTCTT chr4 + 94230402 7526230 7526229 7526313 7526230 7526229 7526313 84 CCTTTGGTTTCTTTGCTCTTTTGTTTTGTTTTACAAATCCTTATTTAATTTATCCCTGCTTTGGAAATTCTAATTTCTGTTATT .:...x:...:x...x........x.......x:x...::.x.x.........::...:.:..:xxx.xx.x......x..x.. 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 106827358 83387197 +3239 chr4 + 190214555 114358394 114358393 114358465 72 GCTCCTGTAATCCCAGCTACCTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x....:.:........:..:.........x.xx.x...x::.........:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 38325188 NA +3505 chr4 + 190214555 114377039 114377038 114377102 64 TTTTTAAAAAATGAGTTCAGCACCATTCCTCTCTCTCTCTCTCTCACACACACACACATACACA chr4 + 94230402 75248032 75248031 75248088 75248032 75248031 75248088 57 TTATCACAAAATAAATCC-------TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x.:.x.....:.:.:.-------....................x............:..... 18M7D39M 49/57 86.0% 57/94230402 0.0% 7/57 12.3% 39129007 NA +3116 chr4 + 190214555 114377067 114377066 114377100 34 CTCTCTCTCTCTCTCTCACACACACACACATACA chr4 + 94230402 75248055 75248054 75248088 75248055 75248054 75248088 34 CTCTCTCTCTCTCTCTCACACACACACACACACa ..............................:... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 39129012 NA +3205 chr4 + 190214555 114385653 114385652 114385725 73 CACTCCTATAAGCTAATTAC-TAATAATATTCCCATCTTACAGATGAGGGAACTGAGACACAGAAAAGCTAAGT chr4 + 94230402 28016176 28016175 28016249 28016176 28016175 28016249 74 CACCTCTAGGAGATAGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ...::...x:..x..:x..x-:....x.........:.........::.:..::.x..:.....:.:...x... 20M1I53M 52/73 71.2% 74/94230402 0.0% 1/73 1.4% 86369477 NA +3272 chr4 + 190214555 114411762 114411761 114411812 51 TGATGTTTGTTTTGTTTGTTTGTTTGGCTGGCTTTTGTTTTTCTTTTTTGT chr4 + 94230402 72544098 72544097 72544148 72544098 72544097 72544148 51 TGATGTTTATTTTGTTTGCTAGTTTAGTGGGTTTTTTTTTTTGTTTTTTGT ........:.........:.x....:.:x..:....x.....x........ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 41867664 NA +3201 chr4 + 190214555 114437810 114437809 114437864 55 TTCCTAAACTCTTAAAATGTTATGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59452063 59452062 59452117 59452063 59452062 59452117 55 TTCCTGTGCTCCTAAAATGTTGTGCGTTTTTTTTGTTTGTTCATTTTTTTTTTTT .....:x:...:.........:..x.x.......x...x..:x............ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 54985747 NA +3498 chr4 + 190214555 114437903 114437902 114437971 69 ATCTGTGGCCCAAGACAATTCTTTTTCTTCCAATGTGGCCAAGGGAAGCCAAAAGATTGGACACCCTTG chr4 + 94230402 43915638 43915637 43915706 43915638 43915637 43915706 69 ATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATG ..x.....:......:....::.....x::x......x..x..:x...x......x.....::...x.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 70522265 NA +3058 chr4 + 190214555 114447133 114447132 114447192 60 AATATTATGTATGTAAAATAAATATTTATTATGTATGTAAAATAATAAATACATTTTTGC chr4 + 94230402 61548768 61548767 61548827 61548768 61548767 61548827 60 AACATAATGTTTATAAAATAAATATGTGTAATGTGTGTAAAATGCTGATGGCATTTTTAC ..:..x....x.:............x.:.x....:........:x.:.xx:.......:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 52898365 NA +3333 chr4 + 190214555 114456407 114456406 114456628 222 TAAATTTTTGAATTATGAGAGGTTGTACTATAAATCTGAAATTAAAACAACACAACT-----TTATTAGC-----TCAGAT----GCATTTTCATTACAAAAATGTA-ACTCATTGAGAATA-----ATGCTT--TTTTCTTCCTACTTAAACTGGAAAAGTTAGAAAGTATAATTATCCAAGCCCTTTATTTCAAGAAGTATCATTATTATTATTGTTATTATTATTTTTTTTTTTTTTGAGA chr4 + 94230402 71484077 71484076 71484290 71484077 71484076 71484290 214 TAAATATCTACATTATGAAA------------------AATCTACAATAACAAAGCTGTTGATTATTAACGTGTTTCAGACAACAGTATTTTAATTGTAATGAGGTAGAAACTTCTGGAATACTCAGATGATTGATCCCTTTCCTCTTTGAATTATGGATGCAA------------ATCCAAGCTTTTTGCTTCTAAATGAAGTCTGGTTGTTTTTGTTGTTCTTTTTTTTTTTTTTTTTGAGA .....x.:.:x.......:.------------------..x:..x..:....x.:..-----......:.-----.....:----.:.....x...::..x:.x...-.xx.x.:x:.....-----...x..--.::::.....x:..:..:.:x::.x.:x.------------........::...::...x.:.x.x.x:x.x:..:..x.....:..x..x.................. 20M18D19M5I8M5I6M4I22M1I14M5I6M2I29M12D68M 132/192 68.8% 214/94230402 0.0% 52/192 27.1% 42972330 NA +3278 chr4 + 190214555 114515191 114515190 114515264 74 GCGCACCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAGTTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.:.......:.::........x.xx.x..:x::........::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 38481987 NA +3264 chr4 + 190214555 114520610 114520609 114520669 60 TGTGTGTGTATATACACATATATGTGTGTATATGTGTGTATGTGTGTATATACACACACA chr4 + 94230402 47135177 47135176 47135236 47135177 47135176 47135236 60 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCA .....:.:.::........:x..xx..x...:.:::............:.:......:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 67385433 NA +3197 chr4 + 190214555 114520618 114520617 114520689 72 TATATACACATATATGTGTGTATATGTGTGTATGTGTGTATATACACACACATGTGTGTATATGTGTGTATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x...:.:..:.:x..x...:.xx.......:....:..:...:......::.:x...:.x::.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 72771522 NA +4030 chr4 + 190214555 114520619 114520618 114520759 141 ATATACACATATATGTGTGTATATGTGTGTATGTGTGTATATACACACACATG--TGTGTATATGTGTGTATATACACACGTGTGTGTATGCGTGTATATACACACACATGTGTGTGTATATACACATATGTGTGTGTGTATA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ..x.:.x:...:........x.x....x.::.:.x.:...:...x....:..:--:.....:x.:.::....:...x..:.:x.x...:.:::...:...:x.:.::....:::::.x:xx....-:.x.x....x.....:. 53M2I70M1D17M 87/140 62.1% 142/94230402 0.0% 3/140 2.1% 93411432 NA +3043 chr4 + 190214555 114520652 114520651 114520696 45 TGTGTATATACACACACATGTGTGTATATGTGTGTATATACACAC chr4 + 94230402 27759114 27759113 27759158 27759114 27759113 27759158 45 TATGTATTTACAAACACATATGTGTATATGCATGTATACACGCAC .:.....x....x......:..........::......:..:... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 86761538 NA +3058 chr4 + 190214555 114520696 114520695 114520758 63 CGTGTGTGTATGCGTGTATATACACACACATGTGTGTGTATATACACATATGTGTGTGTGTAT chr4 + 94230402 86633928 86633927 86633990 86633928 86633927 86633990 63 CGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ....:...::.:x..:...:.x:::.:.....:.............:x.:.:..::.x..... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 27886768 NA +3474 chr4 + 190214555 114520726 114520725 114520780 55 TGTGTGTGTATATACACATATGTGTGTGTGTATACACATATATGTGTGTATGTGT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..::..:........:.....:.......x.x...:..:........:.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 58826272 NA +3218 chr4 + 190214555 114520746 114520745 114520797 52 TGTGTGTGTGTATACACATATATGTGTGTATGTGTGTGTATATATACACATA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .:........:.....:..:x..........:.x...x..:.:.......:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 69705146 NA +3407 chr4 + 190214555 114520758 114520757 114520841 84 TACACATATATGTGTGTATGTGTGTGTATATATACACATATATGTGTGTATATGTGTGTATATATGTACA--TATATACACTACGT chr4 + 94230402 56867291 56867290 56867367 56867291 56867290 56867367 77 TATACATAT---------TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACAATGT ..:......---------........x...:...........:::xx:.....x....:..:...:....--...:.....x.:.. 9M9D52M2I14M 59/75 78.7% 77/94230402 0.0% 11/75 14.7% 57653467 NA +3056 chr4 + 190214555 114520764 114520763 114520822 59 TATATGTGTGTATGTGTGTGTATATATACACATATATGTGTGTATATGTGTGTATATAT chr4 + 94230402 76709592 76709591 76709650 76709592 76709591 76709650 59 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATAT .....:.:..:......x.:..:.x::.:x..:..:.:.......x.....x....... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 37811172 NA +3015 chr4 + 190214555 114520775 114520774 114520832 58 ATGTGTGTGTATATATACACAT--------ATATGTGTGTATATGTGTGTATATATGTACATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:..:..xx.:.......x.--------..........:.:.:.....:.:..:.......... 22M8I36M 46/58 79.3% 66/94230402 0.0% 8/58 13.8% 87195284 NA +3219 chr4 + 190214555 114520996 114520995 114521078 83 ACACACATATACACACATCTATGTGTCTATATACACATACACACATATATATGTGTATATGTATGTGTGTATATAGACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACA------------TGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ..........x....------------.::.x......:..:...x.x......:...x...:.....:...::.x:...:.. 15M12D56M 54/71 76.1% 71/94230402 0.0% 12/71 16.9% 91920798 NA +3187 chr4 + 190214555 114521001 114521000 114521105 105 CATATACACACATCTATGTGTCTATATACACATACACACATATATATGTGTATATGTATGTGTGTATATAGACACATATACATATATATGTGTATATATACATAT chr4 + 94230402 5214217 5214216 5214321 5214217 5214216 5214321 105 CATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...:x:...:....::.....x:::.x::::x.:......:..x..:......:::.x..::...:.:.:x:..x.::.:::.:.::...::x..:.:.:..:.. 105M 58/105 55.2% 105/94230402 0.0% 0/105 0.0% 109306784 80907771 +3500 chr4 + 190214555 114521013 114521012 114521161 149 TCTATGTGTCTATATACACATACACA---CATATATATGTGTATATGTATGTGTGTATATAGACACATATACATATATATGTGTATATATACATATATACATATATGCGTATATACACACATATGTGTGTATATGTCTATATACACATATGT chr4 + 94230402 89812911 89812910 89813054 89812911 89812910 89813054 144 TCTGTGTGT---TGTACACAGGCATGAAGCATTGCTCAGTTTATATGTTAGTGTTTGTG-----GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGT ...:.....---.:......x:..::---...xxx.xx..x.......xx....x.:.:-----:......x...x............x..x..::x.xx...:...:.:.x.:x.x..::::.:...x:x.:...x.:.:.::.:...... 9M3D14M3I30M5D88M 92/141 65.2% 144/94230402 0.0% 11/141 7.8% 24708102 NA +3039 chr4 + 190214555 114521106 114521105 114521172 67 ATACATATATGCGTATATACACACATATGTGTGTATATGTCTATATACACATATGTGTGTGTATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ......:.:.:.:.:.:..::x:..:....x::.:..............:.....xxx:.:....:. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 68457807 NA +3059 chr4 + 190214555 114521159 114521158 114521210 52 TGTGTGTGTATATACACACACATATGTGTATATATGTCTATATACACACATA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA .:.......::.....:.::x..:.........x......:.:.:.....:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 69705559 NA +3024 chr4 + 190214555 114532993 114532992 114533068 76 CACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAC chr4 + 94230402 46063289 46063288 46063364 46063289 46063288 46063364 76 CACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATAC ....:.xxx:...:......:::.....:.:x::.:..:.x:..:...:.x......:......:xxx........ 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 68469704 NA +3102 chr4 + 190214555 114532997 114532996 114533066 70 CTATATATATATGTGTGTGTGTGTGTATA------TATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 39937174 39937173 39937249 39937174 39937173 39937249 76 CTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ..........:.....::...x....:..------..:...:xxx:...:.:...:.......:...x..:.::.. 29M6I41M 51/70 72.9% 76/94230402 0.0% 6/70 8.6% 74595823 NA +3056 chr4 + 190214555 114533000 114532999 114533072 73 TATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATACTAAT chr4 + 94230402 21109194 21109193 21109266 21109194 21109193 21109266 73 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCAT ....:..:.....x.x....x.::...x.....:..:x:.:.....:x::.:..:x....::...:....x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 93423806 NA +3197 chr4 + 190214555 114566853 114566852 114566955 103 AGGGTCCTCGTGATTAAAAATACATCTATGCCCA-------GAGTGACGTGCTGTGTTATATATATGTGCATGTGTGTATGCGTGTGTGTGTTAAATTACAATATAAATA chr4 + 94230402 73100509 73100508 73100618 73100509 73100508 73100618 110 AAGAACCTCATAATGACATATGCTTTTCTGTTGAAAAATATGAGTTACGTATCTAGTTGTATCTATGTACATGCGCACCTGTGTGTGTGTGTATAAATACATTATAACTA .:.:x....:.:..x.x.x..:.x.:.x..::x.-------....x....:::xx...:...x.....:....:.:::x..:..........xx..x....x.....x.. 34M7I69M 68/103 66.0% 110/94230402 0.0% 7/103 6.8% 41466344 NA +3856 chr4 + 190214555 114574296 114574295 114574422 127 TTTTCTTTCCTTCCTTCC--TTCCTGCCTGCCTGCCTT-------CCTTCCTGCCTGCCTGTCTTCCTTCCTACCCTCCCTCCCTCCCTCCCTTCCTCTCTCTTCTCTCTTTCTC-----TCTTTTTCTCTTTCTTTGATG chr4 + 94230402 4529537 4529536 4529677 4529537 4529536 4529677 141 TTGTCTTCCCCTTGCTCCAATTTCTGTGTGTGTGTCTCTTCTCCGCCTCCTTGTCTGCATGTCTCCTCTCCCATTCTGCCTCGCTCCACCCCTCTGTCTCTCTCCTCTGTCTGCCCCACACCCTTTTGTCCTGCTTGGCTG ..x....:..:.:x:...--..:...:x..:x..:..:-------...:.:..:....x.....:.::...:.::..x....x....x:....::x.......:....x.:.x:.-----:.:....x..:.x...x.x.. 18M2I18M7I70M5I21M 85/127 66.9% 141/94230402 0.0% 14/127 11.0% 110044759 80169796 +3017 chr4 + 190214555 114611367 114611366 114611475 109 CATCTTTTTCTGTAGGATAACATAGCCATATATATCC----ATATATATATATATATATATATATATATATATATATATATATACACACACACACAGAGATATTAGATATATA chr4 + 94230402 58675340 58675339 58675452 58675340 58675339 58675452 113 CAGCATTGTCTGTTGGAAAAACTGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATA ..x.x..x.....x...x..xx.:x:::...x.:xx.----..x.x..:.:..x.x.:...::.........:.:x:....:.:.........x..:.x.....x:::x.... 37M4I72M 70/109 64.2% 113/94230402 0.0% 4/109 3.7% 55936027 NA +3716 chr4 + 190214555 114660759 114660758 114660833 75 GGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGCCAGGAGAAAGGCGTGAACCCAGGAGGTGGAGCCTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x......:.........:.::..........xx.x...:x:.x.........:..x.xx:.x...:.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 38627556 NA +3096 chr4 + 190214555 114675600 114675599 114675669 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 38642403 NA +3100 chr4 + 190214555 114682928 114682927 114682985 58 CACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x......:.........:.::........x.xx.x...xx:.x.........:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 38649721 NA +3191 chr4 + 190214555 114703396 114703395 114703475 80 TCTCATTTTATCCTTTGGGCCCTAGTTTCCACACCCAGATACTCTAAAGTCTATCTTGTTTTGTTTTTTTTTTTTTTTTT chr4 + 94230402 50148499 50148498 50148578 50148499 50148498 50148578 80 TTTGATTTCATTCTTCTTGCATTAGTCTTCTCCCACATACACTCTTGGGTTTGTTTTTTTTTGGTTTTTTTTGTTTTTCT .:.x....:..:...:xx..x:....:.:.x.x.x..x.:.....x::..:.:.:..x.....x........x.....:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 64554897 NA +3026 chr4 + 190214555 114721892 114721891 114721990 99 CAGTTACTGTTTTCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCT chr4 + 94230402 26784807 26784806 26784905 26784807 26784806 26784905 99 CAGTTTTATTCTGCTTAATGTTTCTCCATTTTTTTTTATTTCTCCTACTGAGCTGTATTATCCTCCTTTCCTCTCTTTCTTTCTTTATGTTCTCTTTTT .....x:xx.:.x...xx.x......:x..::.....x:..:..:.x:.xxx:.x:x..x.::.:::..:..:.............x.x........:. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 87937085 NA +3424 chr4 + 190214555 114721899 114721898 114722021 123 TGTTTTCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTT--TTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTTTT chr4 + 94230402 75287120 75287119 75287244 75287120 75287119 75287244 125 TATTTTTCTTCCCTTTCCTTTGCTCTCAGTCCTCTCATTTTAATGTGCTTATTCTATTTTGCCTTTTTCGTCTCCTTACTTCACCTCACTGTATTTTCATTTTTCTTTAATTCCTCCTTTTTCCT .:....::...::....::..x::..:xx.:..:.:x....--.x.x:..x..::x....x.:..:..:x.:..:..x:...x::..x..x.x...:.x.:.......xx...:.:......::. 41M2I82M 75/123 61.0% 125/94230402 0.0% 2/123 1.6% 39434779 NA +3528 chr4 + 190214555 114721903 114721902 114721999 97 TTCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTT chr4 + 94230402 50176318 50176317 50176414 50176318 50176317 50176414 97 TTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ........x..::.:x.x.:.x.....x.:......:......:xxxx.::x::..:::x...::..x.:..:.........:.:..:.:.x..... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 64545585 NA +3600 chr4 + 190214555 114721904 114721903 114722022 119 TCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 68974688 68974687 68974806 68974688 68974687 68974806 119 TCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCATCTGTTCTAATTTTTGCAGCTTCTTTT .....::.x....::xx...:.....:....:.......:x.x.:...:.:.x.::xx:......x:x.x:.:.x:....:..x....:..x...x.::.xx...:.x:xx:..:.... 119M 73/119 61.3% 119/94230402 0.0% 0/119 0.0% 45747216 NA +3233 chr4 + 190214555 114721911 114721910 114722022 112 TTTTCTCTTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 68974683 68974682 68974794 68974683 68974682 68974794 112 TCTACTCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTTTCTTATATATTCTGCTTTCCCTGTCTTCCCATCTGTTCTAATTTTT .:.x........:x..:...xx.:.:......:...:...:....x.x::.:::...x.::xx:......x.x.x..::x:.::::..x....:.:x...x.::.xx..... 112M 67/112 59.8% 112/94230402 0.0% 0/112 0.0% 45747228 NA +3112 chr4 + 190214555 114721918 114721917 114722036 119 TTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCT-TTTTTTTTTTTTTGACAGAGTC chr4 + 94230402 64939547 64939546 64939666 64939547 64939546 64939666 120 TTTTCTCCTTGAGCTCTCCCAGTTTACTTCTTGCTTTTTTTTTTTTTTCTTTCCCCCCATTCTTTACTTGTCATTCCCTGTACTGATCTTTCTTGCCAGGTGTTTACTTTGGACAAAGCC .....:::..xxx:.:..::xx...x:.....x.......:...:........:::.:x.::...x::.x..x....:.x.x::xx........x.:-xx.x...x:...x....:..:. 97M1I22M 73/119 61.3% 120/94230402 0.0% 1/119 0.8% 49782371 NA +3011 chr4 + 190214555 114721928 114721927 114721990 63 TTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCT chr4 + 94230402 66248600 66248599 66248662 66248600 66248599 66248662 63 TTTTTTTAACTTTTCACATGACTCTTTTTTCTTTCTTTTTGTCTTATTTTTTCTTCTCTTTCT ..:....xx:....:x:x.xx:................:.x....x:...:.:.......... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 48473328 NA +3166 chr4 + 190214555 114721936 114721935 114722020 85 TTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTT-------------TCTTTCTTTCTTTCTTTTTTT chr4 + 94230402 59835408 59835407 59835505 59835408 59835407 59835505 98 TTTTTTTTCTTGTTTCAAACTTCTTACTTTATTTCTTGTTTTCTCTTTTCTCTTTTTCCTGTTTACACTGGGAAAACTTTTTCTTGCTGTGTTATTCT .......::..x....xxx:.....x....x......x:.....:..:...:.:......x:..-------------.:......x..x.x..x..:. 64M13I21M 62/85 72.9% 98/94230402 0.0% 13/85 15.3% 54886528 NA +3190 chr4 + 190214555 114733669 114733668 114733753 85 ACACATATATATATACACACACACACACACACACACATGTATATATATATAT------ATATATATTAATATCTCTTTCCTGCACGAAAAA chr4 + 94230402 89823929 89823928 89824018 89823929 89823928 89824018 90 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCC-CATGAGAAA ..x:......:x....................x:.:.xx........::...------x.....::.xx..:...xx...:-..:..:... 52M6I23M1D9M 62/84 73.8% 90/94230402 0.0% 7/84 8.3% 24909740 NA +3226 chr4 + 190214555 114733673 114733672 114733731 59 ATATATATATACACACACACACACACACACACATGTATATATATATATATATATATTAA chr4 + 94230402 46140856 46140855 46140914 46140856 46140855 46140914 59 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAA .........:......x.x....:........:........:.x.:x..:.x.x:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 68592817 NA +3161 chr4 + 190214555 114733675 114733674 114733725 51 ATATATATACACACACACACACACACACACATGTATATATATATATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:.......:..:......:.x.:x..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 68592819 NA +3164 chr4 + 190214555 114733679 114733678 114733739 61 ATATACACACACACACACACACACACATGTATATATATATATATATATATTAATATCTCTT chr4 + 94230402 74526074 74526073 74526134 74526074 74526073 74526134 61 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTT ..x:.............::x...:...::x.......::.......:....x.x..:x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 40207605 NA +3018 chr4 + 190214555 114733870 114733869 114733917 48 ATAATATATACCATATATTTTATATATACATATATATACACACACACA chr4 + 94230402 30834189 30834188 30834236 30834189 30834188 30834236 48 ATGGTATACAATATGTATTATATATATATATATACACACACACACACA ..::....:.x:..:....x........:.....:.:........... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 83899681 NA +3151 chr4 + 190214555 114733876 114733875 114733919 44 TATACCATATATTTTATATATACATATATATACACACACACATA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA .....x....:.x.........:.......:...........:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 83899683 NA +3085 chr4 + 190214555 114769848 114769847 114769905 58 TGTGTGTATGTATGTATATATATGTGTATATATGTGTATATATATGTGTGTATATATA chr4 + 94230402 40388217 40388216 40388274 40388217 40388216 40388274 58 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTA ...........:.x...x..:....:.::.......:...:.x......:xx.:.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 74381631 NA +3030 chr4 + 190214555 114769855 114769854 114769922 68 ATGTATGTATATATATGTGTATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...x::..:::.:::.:x......:.x......:..::...........:..x...:..::.x.:... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 28135932 NA +3076 chr4 + 190214555 114786278 114786277 114786341 64 AAGCAAACAAACAAAAAATAAAAGCAAACAAACAAAAACCCCCAAAAAACTGGAGCCATCACAT chr4 + 94230402 87233724 87233723 87233782 87233724 87233723 87233782 59 AAGCAAA-----AAGAAAAAAAAGCAAGCAAACAAAAAACCACACAAAACTTCAACCATTGCAT .......-----..:...x........:..........x..x..x......xx.:....::... 7M5D52M 48/59 81.4% 59/94230402 0.0% 5/59 8.5% 27552554 NA +3018 chr4 + 190214555 114786286 114786285 114786326 41 AAACAAAAAATAAAAGCAAACAAACAAAAACCCCCAAAAAA chr4 + 94230402 34292958 34292957 34292998 34292958 34292957 34292998 41 AAACAAAAAACAAAAACAAACAAACAAAAACACCAGAAAAA ..........:....:...............x..x:..... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 80493328 NA +5606 chr4 + 190214555 114799346 114799345 114799509 164 TGCACTTGCATTCCAAGCTACTCAGAAGGCTGAGCCATGAGGATCACTTGAGCCCAGGAGTTCTGGGCTGTAGTGCATTGTGGGTATCAGGTATCTGCACTGAGTTCTGCATCAATCCGGTGACCTCCTGGGAAGTGGGGGACCACCAAGTTGCCTAACAAGGG chr4 + 94230402 76033205 76033204 76033366 76033205 76033204 76033366 162 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGC--AGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAG .....x..:.x.:.x.......:::...........x..x.:.x.......:.....:..:.:..........x:...x:..xxx.x...:.:.x...x..:..:::xx:x:..::x:......:x.--:.::..:xx...::...x.:.:..:..:.x:..:. 127M2D35M 103/162 63.6% 162/94230402 0.0% 2/162 1.2% 38766141 NA +3235 chr4 + 190214555 114821023 114821022 114821081 59 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x....:.:...........::........x.xx.x...x.......:..::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 38787817 NA +3018 chr4 + 190214555 114821140 114821139 114821204 65 AAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAGAAAGAA chr4 + 94230402 69582225 69582224 69582289 69582225 69582224 69582289 65 AATATTCAGAATGAAAAAAAAGAAAGAAAAAAAATGACAAAAATGACAACGAAAAGAGGAGAGAA ..x.:..x.xx.x........:...:........x..x.....x::x..x.......:..:.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 45238915 NA +9448 chr4 + 190214555 114827809 114827808 114828013 205 TCCAGTGCTATCTCACTTTCTGCAGTTCCTGTCTCAGCCACGATGGCAGAGGCTGTCCCAGTCTGTGTAGCAGTTTGGATAGTTCCACATTATGATCTCGGTAGTAATTAGAGAGGAACGTTCTAGACTGGAAAGAAAAAAAGAAGAACTTGAAAGAAGCTCTTTGTTTCATCAAACAGGATATTGTAAT--CTATATTTCTTAAGG chr4 + 94230402 56617656 56617655 56617852 56617656 56617655 56617852 197 TTCAATGCTATCTTACTTTCTGTAGTTCCTGTCTCAGCCACGATGGCAGAGGTTGTCCCAGTTTGTGTAGGAGTTTTGACAGTTCCACATTATGATCTCTGTAGTAGCTTGACAGAAAAGCCCTGCACTGATGGATATAAACGCAGatat----------tttttatttaataaaatGTCGTGCTGTAATGACTGTAAATTTCAAAG .:..:........:........:.............................:.........:.......x.....x..:...................x......::.x..x..:..x.::..:x....:x:::x.x...x.x...xx.----------.:...:...x..x...::xx:.::......--..:..xx.:.:..:. 150M10D30M2I15M 147/195 75.4% 197/94230402 0.0% 12/195 6.2% 58210153 NA +7830 chr4 + 190214555 114829786 114829785 114829911 126 TTACCTCTGGATCCATAGGTGGATATTTTCGGCCTTTGCTTTTTCCAAGGCATTTTGTCTTTCCTCCTTCCAGTAATTGACACCAAAAACCCTTTTGGGGATCAAACCTACAGTACATA---AAACATA chr4 + 94230402 56619509 56619508 56619637 56619509 56619508 56619637 129 TTACCTCTGAATCCATAGGAGGGTATTTTCTACCTTTGCTCTTTCCAAGGCATTTGGTCTTTCCTTCTTCCAAAAGCTGACACCAGAAACCTTTATGTGAATCAAACCTGAAACAAATATTTAAACACA .........:.........x..:.......x:........:..............x.........:......:x.::........:.....:..x..x.:.........:x.::.x...---.....:. 119M3I7M 103/126 81.7% 129/94230402 0.0% 3/126 2.4% 58210277 NA +9358 chr4 + 190214555 114833569 114833568 114833758 190 ATAATGGAAATGAAATCAAGCATGACAATAGACTCACGTTAGTGCTTCAGAGTAATTATAACGAGGTGTAACTCCCAGAAACTTCTGGACTTCATCCATCACAGTAGCTGGGTCAGATCTCAGCTGCTGTCCATCAATAATTAGCAACTGTAAAGTCAGAAATAGTCACTTTATGAAGAAAAAAATTAAA chr4 + 94230402 56620786 56620785 56620955 56620786 56620785 56620955 170 ATAATGATGATAAAATTAA-------------CTCACGTTAGGGCTTCTGAGTAATTATAATGAGGAGATACTCCCAAAAATTTCTGTACTTCATCCATTACAGTAGATGGGTCAGTTCTTAGCTGCTGTCCATCAATAATTAGCAACTACaaaaaataaaataa-------atggaaatataatttaaa ......:x:..:....:..-------------..........x.....x............:....x.xx.......:...:.....x...........:.......x........x...:............................::...:xxx:.....:-------...:.:.x.x..x..... 19M13D133M7D18M 139/170 81.8% 170/94230402 0.0% 20/170 11.8% 58212783 NA +9504 chr4 + 190214555 114839316 114839315 114839583 268 AAATATAAAATTTCAGGACATTATAATAAAATAAACAGAAGAAAGTAATTTCAGGACATT-ACCTGAGAAGTAGCAAAGTAAGTTAGCCATCTTTCTATGTGGACTGCATACCATCCAGGTACTAGGCATCTTCTCTGCAAAGTTTTTAAGTCAGATGGAGCCCAATGTCCTGTTGAAATAACTTCATAGAAATTGAACCTCAGAGCAGCTGGATCTTCATGTGATCGTTGGTGCTTTAACAAGAAAGTCAATTGTAAAGTTAGATTTT chr4 + 94230402 56624422 56624421 56624676 56624422 56624421 56624676 255 AAAGATAGTCTTTCAGAATATTATAT--------ATATAAGGTTAGGATGTCGAGTTATTCACCTGATAAGGTGGGAAGTAAGTCAGCCATCTCTCAATATGTGTAGCATACCATCCAGGAGCTAGGCATCTCTTTTGGAGAGCTCTAAGTTCAGAAGGGGCTCGAGGTCCAGCTGTGATTACCTGGTAGAAACTGAATTTCAGGGCTGCAGGATCTTCATGTGAGCGCTGATGCTGT------AAAACAAGTTGCAGTGCTGAGTTTT ...x...:xx......:.:......x--------.:.x...:xx:x:..x..::.x:...-......x...xx.x:........:........:..x..:..x::x..............x:..........::.:..x.:..:.:.x.:x.....x..:..:.:.x....x.:..x:..x..:.x:......:....::....:..x..x..............x..:..:....x.------...::x.:...:.:x.:.:::.... 26M8D26M1I177M6D25M 175/254 68.9% 255/94230402 0.0% 15/254 5.9% 58214894 NA +3043 chr4 + 190214555 114842661 114842660 114842743 83 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........::::........x.xx.x...xx:.x......::.:..x.xx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 38809464 NA +3131 chr4 + 190214555 114845201 114845200 114845274 74 GTGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGGATAACTTCAGCCCAGGAGGGAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......::..........::........x.xx.x.:.xx....x.:.....:..xxxx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 38811997 NA +12143 chr4 + 190214555 114845806 114845805 114846035 230 TTTTTTACTGACCATACCTGGTACCAAGAGTATGCCCTGTCTGAGGGGTCAATGAGGATGGTGATGATCTTGGCTTTGGGGACAAGAGATGCGGCTCGTCTTGGAGCTTCTTCCGAATGGAAGTAATTAGCACTCTTTTCAAACAGAAAGTCACTTGTAGTATTGGATGGTGTAGGGAAAAAGTCCATATACCTGAAGGCAGAGAAAGACAATT-----AATTAATCTGAAAATA chr4 + 94230402 56626099 56626098 56626330 56626099 56626098 56626330 232 TTTCTTAATATACATACCTGATACCAGGAATACGCCCGATCAGATGGGTCAATGAGGATGGTGATGATCTTGGCCTTGGGAATGAGGGAAGCAGCTCGCTTAGGAGCTTCCTCAGAATGAAAATAGTTGGCACTTTTCTCAAAGAGGAAGTCAGTGGTGACATTGGAAGGAGTAGGGAAGAAATCCATGTACCTAGA---AAAGGAACATCATTTTCAGAATTATTTTGAAGACA ...:...x.:xx........:.....:..:..:....x:..x..x.............................:.....:.::..:..x..:.....::.x........:..x.....:..:..:..:.....:..:.....x..:......x.x..:::......x..x........:..:.....:.....::.---.:..:..x.:x...-----.....x.:....:.:. 197M3D14M5I16M 173/227 76.2% 232/94230402 0.0% 8/227 3.5% 58219707 NA +3096 chr4 + 190214555 114847236 114847235 114847305 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 38814039 NA +7567 chr4 + 190214555 114848209 114848208 114848367 159 TCTTACCAGTCTATTCCTTTGTGATAGTTGTTGCCATTAAAGAACTGAACTTCCTCAAATGTCTTTGGACTAGGGAGATTGCTGATGATTGAAGGATGCATAAGAAGAAATAAATAAAGTGCAGTTGTTCCTGTTACAAAAAAAGAAAGTAAAAGGTTA chr4 + 94230402 56629160 56629159 56629317 56629160 56629159 56629317 158 TCTTACCAATCAATCCCCCTGTGGTAGTTATTTCTATTAAAGAACTGTACCTCCTCAAAGGTTTTTGGGCTGGGGGAGTTACTAATGATGGAAGGGTGCATGATCAGGAACAAATACAAGGCGGTGGTACCTA-CAAATAGGACAAAAGTCTAAGATTA ........:..x..:..::....:.....:..x.:............x..:........x..:.....:..:...:::..:..:.....x.....:.....:.xx..:..:.....x.:x..:..x..x...:-:.x.x.::.x:.....xx...:... 133M1D25M 114/158 72.2% 158/94230402 0.0% 1/158 0.6% 58219049 NA +7016 chr4 + 190214555 114852717 114852716 114852840 124 ATTTTTACCTGTTTTTTGTGGACCAATTACTAGAAATTTTGGTAAGTGGTCACAAGTTTTCTCTCTGGACCAGATGTCTTTGTGTCGTTTATCATCACATGGATTCTGCAAGAAGGAAGAATAA chr4 + 94230402 56630114 56630113 56630237 56630114 56630113 56630237 124 ACTCTTACCAGTTTTCTGAGGTCCTACAACCAAGAATTTTGGTAATCGATCACAGGTTTTTTCTTTAGACCAGATATCTCTGTGCCGTTTGTCATCACAGGGATTCTGAAGTAGAGGAGAACAA .:.:.....x.....:..x..x..x.:x..:.::...........x:.:.....:.....:...:.:........:...:....:.....:........x........x.:x.::.:....:.. 124M 93/124 75.0% 124/94230402 0.0% 0/124 0.0% 58222603 NA +12608 chr4 + 190214555 114870765 114870764 114870968 204 TACCTGCCATAGAGGGTCTTTCTGCTCAGGGAAGAGCTCAAAATACTGGTGGGCCAGTTGCACTGGAGGCAGAGTTTGCAATTTCAGGTTGGTCCAGCTCTGCACAAAGTTGACCAAGTTCACAAAGGTATATAACCCTAGGCGGTCATTTCCATAGTTTGATAAATGGGTCATGAAAATGCTGATCTGAAAGATAAATAAAAA chr4 + 94230402 56632192 56632191 56632395 56632192 56632191 56632395 204 TACCTGCCAGAGTGGATCCTTTTGCTCAGGGAATAGCTCGAAGTACTTGTGAGCCAGCTGAACCGGAGGAAGAGTCTGCAGTTTCAGGTTTGTCCAGGTGTGCACAAAGTTGGCCAGATTCACAAACGTATACAGCCCCAAGCGGTCATTTCCGTAATTAGACAAGTGTGTCATGAAGATGCTGATCTTCAAAAAACACCAAGA .........x..x..:..:..:...........x.....:..:....x...:.....:..x..:.....x.....:....:.........x......x.x............:...::........x.....:.:...:.:............:..:..x..:..:..x........:..........xx..:.x.x.:x..:. 204M 162/204 79.4% 204/94230402 0.0% 0/204 0.0% 58238573 NA +3202 chr4 + 190214555 114877930 114877929 114878021 92 AATGAGAAGTAAGAGAAAGAGGAGAGGAAAAAAAAAATAAAGAAGGAAAGAAAATGGAAGAAATAAAGAAAGAAAGGAAGAAGAGAAAAGAA chr4 + 94230402 21140579 21140578 21140667 21140579 21140578 21140667 89 AATGAGAAGTAAGGGAGAAAGGAAAGGATTAAGAAGTGATTGAAGGACAGAGA---TGATAAATAATGAAGAAGGGGAAAGACTGCAAGGAA .............:..:.:....:....xx..:..:xx.xx......x...:.---x:.x......x...::.::....::.xx.x..:... 53M3D36M 61/89 68.5% 89/94230402 0.0% 3/89 3.4% 93737351 NA +3493 chr4 + 190214555 114877965 114877964 114878051 87 AATAAAGAAGGAAAGAAAATGGAAGAAATAAAGAAAGAAAGGAAGAAGAGAAAAGAAAGAGAAAAAAGAAATGAAAGGAAAAAGGAA chr4 + 94230402 16539679 16539678 16539764 16539679 16539678 16539764 86 AGTAAAACAGGAAAGAAACTGGAAGAAGTAGCTTTAAAAATGGAAAAAAAAAAAG-GGGGGGGAAAAGAAATGTAATGCAAGAAGAA .:....:x..........x........:..:xxxx.:...x.:.:..:.:.....-::.:.::..........x..x.x..:.:... 55M1D31M 60/86 69.8% 86/94230402 0.0% 1/86 1.2% 98338286 91876269 +3300 chr4 + 190214555 114896485 114896484 114896566 82 GTGGTGTCGGCCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTCCAACTCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----.:.x......:...........::........x.xx.x...x....:x...:...:..x:xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 38863284 NA +3037 chr4 + 190214555 114916533 114916532 114916596 64 GCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATGTG chr4 + 94230402 13734902 13734901 13734965 13734902 13734901 13734965 64 GCTTGGGGTGGGCGTGTGTGTCTGTACTGCTGGGTGTGTGTGCATATCTGTTTGTGTATATATG ...:x.x...x.:........x...::xxx..x.........::.:.x.........:...:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 101181631 89032924 +3264 chr4 + 190214555 114918509 114918508 114918606 98 ATGTGCACATGTACCCTAAAACTTAAACTATAATAAAAAAATAAAAATAAATAAAAAAAAAATAAAATAAAAAATAAAAATAGAATCAAACCGAACAA chr4 + 94230402 49112895 49112894 49112992 49112895 49112894 49112992 98 ATTTGCAGTTCTGATTTTAATTTGAAGCAGTAGTAGCAAATTAAAAATAAATAAAAAGCAAGCTGAAAAAAAAAAAAAAAGAAAACCACAGCTAACAA ..x....xx.x.:x::.x..x:.x..:.x:..:..:x...x................:x..::x:..x......x.....x.:..:..x.x.x..... 98M 65/98 66.3% 98/94230402 0.0% 0/98 0.0% 65805614 NA +7899 chr4 + 190214555 114935199 114935198 114935358 160 TACATACTGGGTTTAGAAGGATTGTGAGAAAAAGTTCACCTCCTCTGATACTTTTATCCAGTTCTTGGGGTCCTCCTGGATATTCTTTGTAGAAAATAGTGTGAGTGAACAACCCACAAGTCTGTCGAGGGAGGACCTGAG-------TAAAAAAGGGGAAAAACAG chr4 + 94230402 56643617 56643616 56643783 56643617 56643616 56643783 167 TACTCACTGGATTGAGAACCACCGTGAAGAACAACTCTCCACCTTGGATACTTTTGTCTAGTTCCTTTGGGCCTCCAGGATACTCTTTATAGAAAATAGTGTGGGTGAATAAGCCACAAGTTTGCCTAGGAAGCACCTGAATTTAATTTAAAAAAAAGCAACAAAAG ...x:.....:..x....xx.::....::..x.::..x..x...:x.........:..:.....:.xx..x.....x.....:.....:..............:.....:..x........:..:.x...:..x......:-------.......::.x..x..x.. 141M7I19M 120/160 75.0% 167/94230402 0.0% 7/160 4.4% 58291582 NA +12135 chr4 + 190214555 114937313 114937312 114937524 212 CTCACCATGATGCTATTGTGAATGAAGCCCTTTCTGTACCGGGCAGGTTTCAGATGTGGATATTCTTCAGTGCTGGTGACTTGAATACCCCAGACCTTCTTCCAAGCTGCATACAGCTGAATGTGAACCGGGTAGACCCCTGAGTGATGTGGGGCCACAGCATAGCCCATGTTGATTGGTATTCCATGTTCCTAAAACAAAGCCAGAACAAC chr4 + 94230402 56647214 56647213 56647424 56647214 56647213 56647424 211 CTCACCATTATATTTTTGTGGATGAAGCCTCGTCTATACCTCGCAGGTTTCAGATGTGGGTATTCTTCTGTGCTAGTAACTCTGATATTCCAGACCTTTTTCCAGGCATCATAAAGTTGAACATGCACTGGATATACTCCAGAATGGTGAGGAGCCACTGCATAGCCCATATCAGTTGGAATACCATGTTCCTAAAACACAA-CAGAACAAC ........x..::.x.....:........::x...:....xx.................:........x.....:..:...:x:...::.........:.....:..xx....x..:....::..x..:..:..x..:..x..:..:..x..:.....x...........:.:::....x..x................x.:-......... 202M1D9M 164/211 77.7% 211/94230402 0.0% 1/211 0.5% 58290099 NA +3096 chr4 + 190214555 114969174 114969173 114969243 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 38935977 NA +11961 chr4 + 190214555 114970397 114970396 114970641 245 AGTTCAAAAGATACCACAATAAAATGTGCTCACCAGTGCAAATTCCTTGTTGAGAATCATCTGCTCTACTAAAGATGACTCGTTGTGGAAGAGGTGGGGCTGCATGTGGCTCCACATGTGAGGAAACCACCAGAACTCATCCACAGACCGAAGTAAAAGGTCATCTCCTTCATCTTCCTCTTCAGTCCCTTTAAAACATAAAGTTAAAAATAACTTTAGTGAAAATTTCTTACTATCTTAAAGGT chr4 + 94230402 56651436 56651435 56651674 56651436 56651435 56651674 239 AATTCAATACAAAAAGCAAAAATAT-TACTCACTAAGGCAAATTTTTTATTGAGGATCATCTGCTCCACCAGTGACGACTCATTGTGGAAGAGATGAGGCTGCATGTGGCTCCACATATGGGGAAACCACCAAAACTCATCCACAGATCTCAGCAGCAGGTCATCGCCTTCATCTTCCTCCTCAGTGCCTGAAAAAAAAA-----AAAAATAAATCCTTGAAGTGTACATTATGATCTTACAAGT .:.....x.x.x.xx:...x..x..-.:.....:.:x.......::..:.....:...........:..:.:x..:.....:...........:..:....................:..:...........:..............:.xx..:.:x........x..............:.....x...xx....x.x.-----........x.::xxx:.:x:.x:x...:x......x.:.. 25M1D174M5D40M 181/239 75.7% 239/94230402 0.0% 6/239 2.5% 58318961 NA +7244 chr4 + 190214555 114977180 114977179 114977319 140 TTCTTACCTGTGTGGTAAAACTTCCCTGAAAATCCAAGGTTGAAGGTAAAATTTGCAACCTGAGTGCGCAGTAAATTTTGAGTCTCTAGTAATGCCTGAAATAAATAAGAAATTAAC--ATGATTTTAGAAAAATAAATATG chr4 + 94230402 56655089 56655088 56655225 56655089 56655088 56655225 137 TTCTTACCTGTGTGATAAAATTTCCCTGAAAATCCCAGGTTGAAAGTAAAATTTGTAATCTGAGTTCTCAAAAGATTCTGAGTGTCAAGCAAGGCCTGAAA-----AATAAACCAACATATAACCGTAGAAAACTACACTTG ..............:.....:..............x........:..........:..:......x.x..:x.:...:.....x..x..:..x........-----..x...::...--..:.::x.......x..x.:x.. 101M5D11M2I23M 108/135 80.0% 137/94230402 0.0% 7/135 5.2% 58322091 NA +3502 chr4 + 190214555 115006033 115006032 115006091 59 AAAAAAAAAAAAAAAAAGAAGAAGAAGAAGGAGAGATAGAAAAAAGAGAGAGAAAAGAA chr4 + 94230402 66803529 66803528 66803587 66803529 66803528 66803587 59 AGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGA .:.:...:..................:......:.:...x.::x.::.......x..:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 48202504 NA +3681 chr4 + 190214555 115006034 115006033 115006133 100 AAAAAAAAAAAAAAAAGAAGAAGAAGAAGGAGAGATAGAAAAAAGAGAGA--GAAAAGAAATAAAGAAAGAAAGAGAAAGAAAAAAAGAAAAAAAAGAAATA chr4 + 94230402 14751916 14751915 14752017 14751916 14751915 14752017 102 AAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAACATTGCAATA ....x....x.x...:.x..............::x:.:...:...:.:::--......x..x.:x:...xx...:..:.x......:.:...x.xx.x.... 50M2I50M 69/100 69.0% 102/94230402 0.0% 2/100 2.0% 100254118 89960437 +3066 chr4 + 190214555 115033104 115033103 115033169 66 TTGAATGCAAAAATTATATATATATGTGTATATATATATATATATATATATATATTTTTTTTTTTT chr4 + 94230402 7268836 7268835 7268901 7268836 7268835 7268901 66 TTTAATGTAAAAGCAATAAACATATATTTCTACTGTTATATGTATATATATATTTTTTTTTTGTTT ..x....:....::x...x.:....:.x.x..:xxx.....:...........x........x... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 107764268 82450287 +3928 chr4 + 190214555 115070974 115070973 115071046 73 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGTA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x......:.........:.::........x.xx.x...x::...........:..x.xx:..:.... 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 39037770 NA +45730 chr4 + 190214555 115075965 115075964 115077036 1072 AACTTTAGGGATTAATAATCTATCATATTAGTAATATTT-TATCGGTACCATATTGTGAAATACAAATTTCGATGTTGTCTATAAATAAGCTTACCTTCACATCTTTGACATTCATCCTTGTTCCCTCTTTCCCAACAAATATATCATCAATGTCCACAAGGATGTACCTGTCCAAGGACAATGTCAGCCTCTTCCCTGACAAGAAGGAGATGGCATCTATGAAGATGAGCTTGTGCAGCCAAAAGTTCAAGTTGTTGCCAAAAAGTACTCTCTGAATTCCATCATGAAGCCCCAGATCCTGAATCACCGTTGCAAAGAGTGTTTTGCTAGACAAGGATGACAGGGATTTTTCTG---TCTGTAACTCAGTTAAAAGTACAGGCTGGTAGGTTGAATGATTATATTGGAAAATAGTCCAGTCTTCCCCAGGAAGAGGGCCTTTCTCAACCTTGGGGGCTTTGGTAATATGCAGCAAAGGAGATTGAGGGTTAACAAAACAGTCCTTTAGAGCTAGATTATTGAAAAGGTTTAACGGAAAGCCTTTTAATTGTGTACTTGGTAAGCTGTTCTCATTGGCTTTATGAAAACCGATTATACTAACACTGTATTCCACACAGTATTTTTCTAAAAGCTCTCGATTCCATGAGTCCATGCTGACATACTTCAGAATATTTTCATAAATAACTAAAGTATATTTCCCTTTGCCATTATCTGTAAGAGGAGGTATATCTCCCTTTCCAGGGGCAATAACCATGTGGTACTGAAATCGGCTGGACTCCAAAATAGCTATGATATCTTGACCGAGTTGAGAGTATTGGCTCTCCACGAAGAGAAGGACAGTAGGGTCCGTTTTGGATGTGTCAATAGGTTTAACTGTTTTCAGCTCCATTGACCTATATGGTAGAATTTTGATGTCAGTGCATTCTGCTTCTGCAGTGGTTTCAATAAGTGTCATTTCCTGTTTGTAGCCAGAGTAGAGAAAATAGGCAGAAATGACAATGCTCACCAAGCAAAAGGTAGCTAAGAGAACAATCAATGTTCGAAAACTTCTCCGAAGTTTCACAATAAGATTCAT chr4 + 94230402 56678030 56678029 56679102 56678030 56678029 56679102 1073 AGTTTCAGCTATTAATAACTGTTCattttaaaaataataataaaaGCATGATATTTTGCTGTAACGACTTT--TAGTTTCTGTACATAC-TTTACCTGTACATCATTGGCATTCATTCTTGTTCCTTCCTTCCCAACGAAGATGTCATCTATATCAACCAGAAGGTACCTATCCAAGGACAGTTTCAGCTTCTTTCCAGACAGAAAAGAGATGGCATCTATGAAAATCAGCTTGTGCAGCCAAAAATTCAAGTTATTGCCAAAAAGGACTCGTTGTATCCCATCGTGGAGACCCAGGTCATGAATTACTGTGGCATGGAGAGCACTTTTAGCAGCAGGTGGCAGAAGGTTTTCTGGTGTCTTTACTTTTGCAAATATCACTGGTTGGTAAGCTGTATGATTAATCTGGAAAATTGCCCAGTCATTTCCAAGCAAAGGACCTTTCTCAAGCTTAGAGGATTTAGTCACATGGAGCAATGGGGAATAAGGGTTAATGCAACAGTCCTTAATACCCAGATTGCTGTGGATGTGGAAAGGAAAGCCCTTCAACTGAAAGCTCTGCAAGCTGTTCTCATTGCCTTTGTAAAATCCAATAACCCCTACACCATATTCTACGCAGTACTTATCTAGAAGACCTCTGTTCCAAGAGTCCATATTCACATACTTTAGAATATTTTCATACACTATGAGAGCGTATTTGCCCTTATTTTTGTCTATAAGCACTGGGAGATCACCTTTTCCAGATGCAATTTCAATGTGATACTGATATCTGCTAGATTCTAAAATGGTTATTATATCTTGGCCTAATGTTGAATATTGACTTTCCACAAACACCAGCACTACAAGATCTGTCCTCAGGGGATCGATAGGCTTCATGGTCTTCATCTCCATCAGTTTGTATGGAAACAGTGGAAGATCACCACATTCCACTTCTGAAGAGATTTCAGAAAGTTCATTTTCTTGTTTGTAGCCATTATACAAGTAGTACGCAGAAATAACAATGCTCACCATACAAAAAGTGGCCAGCAAAATAACTGTTCTTTGAAAATGCCTGTGAAGTTTCATGATAAAACTCAT .::..:..xx........::xx....x...:x....x.x-..xx:.:.:x.....x..xx:..xx:.:..:--.:x.x...:..x...x-:......x:.....x...:.......:........:..:........:..x..:.....x..:..x..x..:.x......:..........:.x.....:....:..x....::..:.................:..x.................:........:...........x....x:..x..:.....:..:..x.....:..x.....:..:..x...x:...x.:x:.x:...xx:x:.:..:...:::x.......---...x..x:.:x.:x..x.x:..x..:.....:.:..x.......xx:........x.:......x.::...:.x.:...:..........x...:.:..x...:..x.:...x.....x..:..x.:........::x..........x.x.x.:.....::..x::.x..xx..x........:..:..:..x:x:..:x.:...............x....:.:...x..:..x.:x.:x....::.....:..:.....:..x....:...x:...x:.....x........::.x........:..............x.:x.:x.:..::.....x..:..:::x..:...:....x:xx..x.x...x..:.......:x.....xx.x.....:......x...x...:..:..:.....:.:...x........:..x.:.xxx..:.....:..:.....:..x.xx..x..x::.:.:..:..::.x::x.x:..:.....:..x.:x..:....x......:::::.:.....x.:x.x.xx:.x:...x::.....::......x..x.:.....:x....x:xx....:............xx:..x.::x.:..x........:.............x:.....:..:..:.:x.:..:..:::x.x..:.....:x:..x:.........::....:.:.... 39M1I31M2D16M1D265M3I718M 744/1069 69.6% 1073/94230402 0.0% 7/1069 0.7% 58397935 NA +3538 chr4 + 190214555 115107027 115107026 115107109 83 GTGCACCTATAGTCCCAGCTTCTTGAGAGGCTGATGTGGAAGGATTGCTTGAGCCCAGGAGTTTGAGGTTGTAGTATGCTATG chr4 + 94230402 76033204 76033203 76033286 76033204 76033203 76033286 83 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ......x.:....:......x.....:.......xx:xx:x.:.x::.....:.....:..:..x:..:.....x.:::x... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 39073823 NA +3009 chr4 + 190214555 115109062 115109061 115109156 95 AGGAAGGAAGGAAAAAGTGGTAAAATAAGAAGAGAAGAGAGAAAAGAATAAAGAAAAAGAATAGAAAAAGAGAGGAAGGGAAGGGAAATAAGAAA chr4 + 94230402 30727053 30727052 30727147 30727053 30727052 30727147 95 AAGAGGGAAGCAAAGGGTGGTAAATTGTGGCAAAAAAAGGGAATGAATGAGAAGAGATGAGCAGATGGAAAGAGAAAGGAGTGGTAAACATTAAA .:..:.....x...::........x.:x.:x:.:..:..:...x::.xx.:.::.:.x..::...x::.:....:....::x..x...:.xx... 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% 84382009 NA +3442 chr4 + 190214555 115125611 115125610 115125711 101 AGTGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAAGCAGAGGTTGCAGTAAGCCAAGATGGCGCCA chr4 + 94230402 76033200 76033199 76033289 76033200 76033199 76033289 90 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .......-----...x......:.........:.::........x.xx.x...x::.........:.:.:x:xx:..:..:..------..x...::.... 7M5D71M6D12M 65/90 72.2% 90/94230402 0.0% 11/90 12.2% 39092411 NA +3096 chr4 + 190214555 115183458 115183457 115183527 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 39150261 NA +3071 chr4 + 190214555 115203090 115203089 115203155 66 TCCCTCCCTCTCTCTGTTGTTCTTTGCTTCTTTCCTTTCTCCCTTCTTTCTC---CCCTTCCCTCTTCT chr4 + 94230402 64726516 64726515 64726584 64726516 64726515 64726584 69 TCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ...x.::....::..x....xxxx.x:..:...........x..........---:...........:. 52M3I14M 50/66 75.8% 69/94230402 0.0% 3/66 4.5% 50476574 NA +3241 chr4 + 190214555 115206299 115206298 115206375 77 GTTGTGCACCTGTGATCCCAGCTACTTGGGAGGCTGAGGTGGGAGGACCACCTGAGCCTGGGAGGGCAAGGCTGAAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......x...::.:...........::........x:xx.x.:.x...:...:..::.:..xx:x:.....x.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 39173098 NA +3263 chr4 + 190214555 115236626 115236625 115236694 69 ATACTTACATATATATATATATATATATATATATATATATATATATATTTACATATATTTTGAAAGATT chr4 + 94230402 64054809 64054808 64054877 64054809 64054808 64054877 69 ATACTTGTATGTGTTTACACGCATACACACATTTATATACATGTATATTTACCTGTCTTTCAAAAAGTT ......::..:.:.x..:.:::...:.:.:..x......:..:.........x.:.x...::...::.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 51181817 NA +3299 chr4 + 190214555 115254193 115254192 115254277 85 ATCAGCCTGATTGTGGT---GATTGTTTTACAATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 85834506 85834505 85834593 85834506 85834505 85834593 88 ATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT ..:x...x..x...:..---.:..x...xx:x..x.....x...............:...xx..:..x::...:....:..x...:.. 17M3I68M 61/85 71.8% 88/94230402 0.0% 3/85 3.5% 29419687 NA +3320 chr4 + 190214555 115254216 115254215 115254294 79 TTTACAATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATCGAAATAT-CAAGCTGTA chr4 + 94230402 46063293 46063292 46063372 46063293 46063292 46063372 80 TTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCA .....x..:::.....:::.....:..x.:.:..:.x:..:...:.x......:......:x.:.x....-....x..:. 70M1I9M 55/79 69.6% 80/94230402 0.0% 1/79 1.3% 69190923 NA +3178 chr4 + 190214555 115254223 115254222 115254277 55 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834595 85834541 85834540 85834595 55 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .....x...................xx..:..x::...:....:..x...:..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 29419682 NA +5036 chr4 + 190214555 115273135 115273134 115273237 103 CTCTCTCTGTCTCTCTCTCTGTCACACACACACACACACACACACACATACAGAGAGAGAGAGAGAAAGAGAGTGAAAGGGACAGAGTCAAAGAAATTTGTAT chr4 + 94230402 75248049 75248048 75248151 75248049 75248048 75248151 103 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaaaagaaaagaaaATCCTAT ..::....x...........x...................x.x.x.x.x.x.........:.:.:.....:..x:.:.::..x.:.:xx.......x.:x... 103M 76/103 73.8% 103/94230402 0.0% 0/103 0.0% 40025086 NA +3055 chr4 + 190214555 115276420 115276419 115276464 45 CATGACATTACATGTATGTGTATATATGCATATACACATTTATAT chr4 + 94230402 64054802 64054801 64054846 64054802 64054801 64054846 45 CATAACAATACTTGTATGTGTTTACACGCATACACACATTTATAT ...:...x...x.........x..:.:.....:............ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 51221618 NA +3096 chr4 + 190214555 115277084 115277083 115277153 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 39243887 NA +3096 chr4 + 190214555 115296882 115296881 115296951 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 39263685 NA +3389 chr4 + 190214555 115314198 115314197 115314288 91 ACCTATGTGTCCATGGAGGAATGAATGCATAAAGAAAATGTGTATAT-GTATATATATATATATATATATACACACACACACACACATACAT chr4 + 94230402 54005646 54005645 54005729 54005646 54005645 54005729 84 ACTTATGTGT-------GTAATGAATGCAGAATCAACAAAT-TATATTGAACACATATGTATTTATATATACATACACACACACACAGAAAT ..:.......-------.x..........x..xx..x.x:.-.....-.x.:.:....:...x..........:.............x.x.. 10M7D24M1D5M1I44M 67/83 80.7% 84/94230402 0.0% 9/83 10.8% 61308552 NA +3063 chr4 + 190214555 115314250 115314249 115314295 46 TATATATATATATATATACACACACACACACACATACATACAGCCA chr4 + 94230402 74671076 74671075 74671121 74671076 74671075 74671121 46 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTA .:..............................x.x.x.x.:...:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 40643174 NA +3343 chr4 + 190214555 115322118 115322117 115322206 89 AGCTTTAAGGTTGTGCAAACAAAGCCAAAAGAAAAAAGAAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGGAGGAGAAGAAGGAGGAGGA chr4 + 94230402 66803504 66803503 66803587 66803504 66803503 66803587 84 AATTTAAAAATATTGCAGATAAAGC-----AGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGA .::..x..::.xx....:.:.....-----::.:.......:..:.........:.:...:...:.x..x...x:.:..::..:x.... 25M5D59M 57/84 67.9% 84/94230402 0.0% 5/84 6.0% 48518614 NA +3433 chr4 + 190214555 115322245 115322244 115322310 66 AGAAGGAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGGAGAAGAAGCAGCAGCAGCATACAG chr4 + 94230402 35548760 35548759 35548825 35548760 35548759 35548825 66 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAG ...:.x...:.......x.....x.:.......:..x....x...:...:.xx:..x..:..:... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 79773485 NA +3094 chr4 + 190214555 115340118 115340117 115340165 48 CATTTGTCTTATTTTTCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 8984603 8984602 8984650 8984603 8984602 8984650 48 CATTTATTTTATTATTCTCTGTGTGTGTGCGTGTGTGTGGTTTTGTGT .....:.:.....x....x..........:.........xx.x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 106355515 83859040 +3031 chr4 + 190214555 115374558 115374557 115374614 57 GTCATATATATGTGTGTGCATATATATAAATATATATATATATATATATATATATAT chr4 + 94230402 37579517 37579516 37579573 37579517 37579516 37579573 57 GCCATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT .:................:..:.........::.:.:::.....xx.:.::.x..:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 77795041 NA +3158 chr4 + 190214555 115385411 115385410 115385459 49 CAGCTTTGTTGTGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTT chr4 + 94230402 38625014 38625013 38625062 38625014 38625013 38625062 49 CAGAGCTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCT ...xx:....x.x.........x.......................::. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 76760397 NA +3123 chr4 + 190214555 115385422 115385421 115385498 77 TGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTT----TGCTTATGATTGCCTTGGCTATTTGGGCTGTTTTTTGATT chr4 + 94230402 63215017 63215016 63215097 63215017 63215016 63215097 81 TGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTTTTAGGATGATTTGGATTTATCAGACTTTTTATTTCATTTTCTTATT .......x........x....................----..x..xx....xx::x.:..x...:xx:::....:.x... 37M4I40M 57/77 74.0% 81/94230402 0.0% 4/77 5.2% 52170405 NA +3049 chr4 + 190214555 115442767 115442766 115442857 91 ATTTTCTTGTCTCTTTTGGACATTGCAAATATATTCTTTTAATATATCACTATCTATTAGATTCTTCAATGATATCTTTCACTGATATGAA chr4 + 94230402 22242865 22242864 22242955 22242865 22242864 22242955 91 ACTTTTCCTTCAGTATTGAATACTGTAAATTTATTTTCTGAGGATATTTCTAATCATTACTTTCTTTAATCTTATTTTTCAGTAGCATGAA .:...:::x..xx.x...:.:.:..:....x....:.:.x.:x....:x...x::....xx.....:...xx...:.....x.:::..... 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 93199902 NA +3039 chr4 + 190214555 115459974 115459973 115460028 55 TATATGGGAGTATATATATATATATATATATATATATATATATACACACACACAC chr4 + 94230402 60163457 60163456 60163511 60163457 60163456 60163511 55 TATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACAC ...x.:...:x...x............:.:........x..:.:x.x........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 55296517 NA +3212 chr4 + 190214555 115466591 115466590 115466668 78 ACGGTGG-GCGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCAGTTGAGCCCAGGAG-GTGGAGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:....-..:.x.x....:...........::........x:xx.x...x..x....:.....:..-x.x.:....:.. 7M1I59M1I12M 58/78 74.4% 80/94230402 0.0% 2/78 2.6% 39433393 NA +3516 chr4 + 190214555 115470066 115470065 115470147 82 TTTCCTTTCTTTCTTACCCTTTAACTTATTGCTTGAAATATTTTCTTTTCTTTTTCCTGTTTTTTTTCCCTTTTTTTTTTTT chr4 + 94230402 48601724 48601723 48601797 48601724 48601723 48601797 74 TTCCAGTTCTCTTTTTCCCTTTA--------TTTAAGATACTTTCTTTTTTTTTTCCTATTTTTTTTCTCATCCCCCTTTTT ..:.xx....:.:..x.......--------:..:.:...:........:........:.........:.x.:::::..... 23M8D51M 55/74 74.3% 74/94230402 0.0% 8/74 10.8% 66868342 NA +3675 chr4 + 190214555 115499005 115499004 115499085 81 CAGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:--....x....:.:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 7M2D72M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% 39465806 NA +3068 chr4 + 190214555 115517428 115517427 115517484 57 GAGATGAAATCAGTATATTTTACTTGAAACTTTTATATATTTTTTTCTTTTTTCCCT chr4 + 94230402 69593075 69593074 69593131 69593075 69593074 69593131 57 GAAATGAAATCAGTATATTTTATCTATGATGTTCAGATGCTTTTTTCTTCTCTGCCT ..:...................::.:x:.:x..:.x..::.........:.:.x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 45924353 NA +3100 chr4 + 190214555 115548368 115548367 115548439 72 GTCTCTCCCACCACAGCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTGTCCTTCTCCTTCTT chr4 + 94230402 25163210 25163209 25163278 25163210 25163209 25163278 69 GTCCCTTCCATCGCAGCTGATCCCTCTCCTCCTCCTCCATCACC---CCTTCTCTCTGTCCTCGGGCTTTTT ...:..:...:.:.....xx...:..............x:.x..---:.....:::......:xxx...:.. 44M3D25M 50/69 72.5% 69/94230402 0.0% 3/69 4.3% 90385158 NA +3085 chr4 + 190214555 115548370 115548369 115548445 76 CTCTCCCACCACAGCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTGTCCTTCTCCTTCTTCCTCTT chr4 + 94230402 34908180 34908179 34908255 34908180 34908179 34908255 76 CTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ......::x:x..x:.......:...:...x....:.....:.xx..x:.xx.x...:.x..x:.x.......... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 80640190 NA +3073 chr4 + 190214555 115548388 115548387 115548454 67 TCCTTCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTGTCCTTCTCCTTCTTCCTCTTCTTCCTCTT chr4 + 94230402 34908189 34908188 34908255 34908189 34908188 34908255 67 TCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ...x.:...........:...x.......:....xx.xx..xx.x:x...x..x..x.......... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 80640199 NA +3037 chr4 + 190214555 115622391 115622390 115622461 71 GATACACACAATGTATATAGGTGTATGTATGTACGTATATACACACACATACATACATGCATATATATACA chr4 + 94230402 61270765 61270764 61270835 61270765 61270764 61270835 71 GATAACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ....xxx..x...x.....xx.....:......::..:::..::.....x...:x....:...x:..:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 54351626 NA +3203 chr4 + 190214555 115624779 115624778 115624840 62 AAAGTGTATGAGACAAGAAATAAAATAAGACTTTAAAAATATTTATAGTGTTTTCTTATCAG chr4 + 94230402 72912439 72912438 72912500 72912439 72912438 72912500 62 AAAATAAACGAAACAACAACAAAAAAAAGACTTTAAAAATATTCTGAGTGTTTTCTTTTAAG ...:.:x.:..:....x..xx....x.................:xx...........x.x.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 42712340 NA +3085 chr4 + 190214555 115634881 115634880 115634950 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 39601684 NA +3178 chr4 + 190214555 115646395 115646394 115646454 60 CTCTCTCTTTCTCTTGCTGTCTCTCTTTCTCTCTCTCTCTGTCTCTCTCTCTCTCTATAT chr4 + 94230402 84992644 84992643 84992703 84992644 84992643 84992703 60 CTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATAT ...:..:...:.:..x..x.:.:..:....::...:.x...:..:......:.x...... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 30653751 NA +3328 chr4 + 190214555 115646410 115646409 115646473 64 GCTGTCTCTCTTTCT----------CTCTCTCTCTGTCTCTCTCTCTCTCTATATATATATATACATATAGTGT chr4 + 94230402 4618338 4618337 4618411 4618338 4618337 4618411 74 GCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTAT .....:.:.......----------......::..x...........x:....::......x.x:.......:. 15M10I49M 51/64 79.7% 74/94230402 0.0% 10/64 15.6% 111028072 79186483 +3052 chr4 + 190214555 115664265 115664264 115664345 81 GACAGCTAATCAATAAAAACAAATGAAAAGTAATAACGTCAGACTTGAGAAGTAAGGTTTTTATTCCTAGCCTGAAGCAAG chr4 + 94230402 57033584 57033583 57033664 57033584 57033583 57033664 81 GGCAACTAATCAATAAAAATAAATTAATATTGATATTGTAGGACTTTTGCAATGTTGTATTTATAGTGCCCCTGAAGCAAG .:..:..............:....x..x.x.:...x:..x:.....xx.x.:.:xx..x.....xx:xxx........... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 58630681 NA +3271 chr4 + 190214555 115669772 115669771 115669834 63 ATATATGTATATATATGTATACATATGTATACATATATATGTATATATGTGTGTATATATATA chr4 + 94230402 22600198 22600197 22600260 22600198 22600197 22600260 63 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCA .:.:.::...x:.:...:.x...:...:.....x.x..........x.......:.....::. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 93069574 NA +3048 chr4 + 190214555 115694143 115694142 115694238 96 AAAATTTTTTAATTGAACTAGTA------------TTTTAAATTAATATTTCCAAATCTTTTGATTTTTCTTTGGGAAAGAAAGGATGACAAAAACATAAATTTTGGT chr4 + 94230402 66424930 66424929 66425037 66424930 66424929 66425037 108 AGAATCTCTCATGCAAGCTAGTACAAGAAAATGTTTTTTGTACTCAAATTTTGCCTTCTTTTTTATTTTCTTTGGAAAAAAAAGAATGAAAAAAAAGTGAATTTCAGT .:...:.:.:.xx::.:......------------....:x.:.x.x....:xxxx......xxx..........:...:....:....x.....x:.:.....::.. 23M12I73M 65/96 67.7% 108/94230402 0.0% 12/96 12.5% 49269213 NA +3373 chr4 + 190214555 115698497 115698496 115698578 82 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCTTTTGAACTCAGGAGTCGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:::......--...x....:.:...........::........x.xx.x...x.x:......:...:..::xx:..:..:. 10M2D70M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 39665300 NA +3232 chr4 + 190214555 115724231 115724230 115724353 123 TCAAAAAAAA---AAAAAAAAAAAAAAAAGGAAAAGAAAAAAAAGAAAAATACATTAAATATAAAGATAGATATTTTTAAAGAATGAAGAAAGACATGCCCTGCTAAAATTTATTCAGACAAAAGC chr4 + 94230402 27189993 27189992 27190104 27189993 27189992 27190104 112 TCAAAAAATATGGAAAATACAGAAAAAAAAAAACAGAAAAAAATGGAAAATACATCAA----AAATATGGAAATACAGAAATAATTAA----------TCAGGCTAAAAGTAGATGAGACTAAAGC ........x.---....x.x.:.......::..x.........x.:.........:..----...x..:..x..x:xx...x...x..----------:.xx.......x.x:x.x....x..... 10M3I45M4D26M10D28M 81/109 74.3% 112/94230402 0.0% 17/109 15.6% 88534238 NA +3426 chr4 + 190214555 115727378 115727377 115727487 110 ATATATATATATATATATATATATATATATATACACACACACATACACACATAAAAAACTACAGGATATATTCAAGAAAGAGAGGAAAAGAATTGTGGGATAAGTTCTAA chr4 + 94230402 74671060 74671059 74671168 74671060 74671059 74671168 109 ATATACAAAAAT-TAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAA .....:.x.x..-..xx.:..............:.........:.....x.x.....xxxx:.::.x.x...x..:.x:x...:...:::.xxx..x::.......x:.. 12M1D97M 73/109 67.0% 109/94230402 0.0% 1/109 0.9% 41056318 NA +3110 chr4 + 190214555 115727393 115727392 115727446 54 TATATATATATATATATACACACACACATACACACATAAAAAACTACAGGATAT chr4 + 94230402 74671076 74671075 74671129 74671076 74671075 74671129 54 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAAT .:..........................:...x.x.x...x.:...x.::.x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 41056317 NA +3036 chr4 + 190214555 115761120 115761119 115761163 44 GATGCAATACTCAAGCTTACATTATTTTTTTTTGTTTGTTTACT chr4 + 94230402 23685883 23685882 23685926 23685883 23685882 23685926 44 GATAGGATATTCAAGCTTACAGTATTTTTTTTTGTTTGTTTGTT ...:x:...:...........x...................::. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 92075237 NA +3540 chr4 + 190214555 115769940 115769939 115770070 131 AATTTTATA----TCAAAGTAAAAATACAGAAATAATAAGTTTCACTATAGATCATTTAAAGCTACAAAGTTCCCTAG-----GGACTAAATACAAATAAAAACAAAGCAACAACAACAACAAAACACCAGCAACTAAAA chr4 + 94230402 26428754 26428753 26428886 26428754 26428753 26428886 133 AATTTCACAGCACTCAAACTAAAAAAAGAAACTTAAAATATTTCACTC---ATCTCTCCACAGTACAA----TCTTAGTTGTTGGAAAAAAAAAAAAAAAAAAACCAGCAGCAACAACAACAAAACAACAGCAAATAAAA .....:.:.----.....x......x.x.:.xx...x.x:.......x---...x:.:x.x:x.....----:.:...-----...xx...x.x...x.....xxx....:................x......x..... 9M4I35M3D17M4D6M5I57M 92/124 74.2% 133/94230402 0.0% 16/124 12.9% 89341186 NA +3296 chr4 + 190214555 115788779 115788778 115788872 94 TTATAGGATATATATATCTTACATATGATATGTATTATATATACCTTGTATAACATATAACATATATTATATGTCATATGTTTTATATATAATA chr4 + 94230402 26320251 26320250 26320344 26320251 26320250 26320344 94 TTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ....xxx.:..:.....x:.......x....:..:......:.x:x.:.x..x:..:..x.xx...x.....x.:xx:.:..x.....:..... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 89468528 NA +3303 chr4 + 190214555 115810369 115810368 115810445 77 ATCTTATGTACTCCATACACACACACACACACACACACACACACGTATATATATACTATCCATCCACAAAAATGAAG chr4 + 94230402 46140846 46140845 46140915 46140846 46140845 46140915 70 ATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACT-------TACAGAAGTCAAG ..:..:....x.x:...:........x.x....:........::.......:.x...-------:...:..:.x... 57M7D13M 53/70 75.7% 70/94230402 0.0% 7/70 10.0% 69669523 NA +3026 chr4 + 190214555 115826617 115826616 115826656 40 TATAAGCATATATGTGTATATCCATGTATACACGCATACA chr4 + 94230402 27759122 27759121 27759161 27759122 27759121 27759161 40 TACAAACACATATGTGTATATGCATGTATACACGCACACA ..:..:..:............x..............:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 88067495 NA +3124 chr4 + 190214555 115835156 115835155 115835218 63 GCCTGACTGTTAGAAGGAAAACTAACAAACAGAAATCAACATCAAAAAAAAGAATGACCATGC chr4 + 94230402 27313581 27313580 27313643 27313581 27313580 27313643 63 GTCAGATTATTATGAGGAAAAACAAAAAACAGAAAACAACAACAACAACAAAAAAAACCATGC .:.x..:.:...x:.......x:..x.........x.....x...x..x..:..x:....... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 88521575 NA +3003 chr4 + 190214555 115864573 115864572 115864618 46 TAAGTATGTGTGTGTGTGTGTGTGTGTATATATATATACATACACA chr4 + 94230402 27325518 27325517 27325563 27325518 27325517 27325563 46 TAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ...:.............:..........::..:.....::x.x... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 88539055 NA +3062 chr4 + 190214555 115864583 115864582 115864623 41 TGTGTGTGTGTGTGTGTATATATATATACATACACAAGATA chr4 + 94230402 83331413 83331412 83331453 83331413 83331412 83331453 41 TATGTGTGTATATGTGTATATATATATACACACATAAAATA .:.......:.:..................:...:..:... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 32533170 NA +3101 chr4 + 190214555 115865652 115865651 115865718 67 TTAGTTGCACTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGA chr4 + 94230402 84199574 84199573 84199640 84199574 84199573 84199640 67 TTGATTGCAGTTGACCAAAAGTCAAGACAAAGTAAAAAGAAAAAAGAAAAAAAAGAAAAGTGGGGAA ..::.....x.:x:......:xx..:.x...:x.....:......:........:.....x.:.::. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 31666078 NA +3627 chr4 + 190214555 115865667 115865666 115865731 65 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAA chr4 + 94230402 43459372 43459371 43459436 43459372 43459371 43459436 65 CAAATAAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAA ....x...::...x.x::x.............x...x.....x...xx................. 65M 52/65 80.0% 65/94230402 0.0% 0/65 0.0% 72406295 NA +3146 chr4 + 190214555 115865668 115865667 115865726 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 43459377 43459376 43459435 43459377 43459376 43459435 59 AAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGA ...::...x.x::x.............x...x.....x.:.xx................ 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 72406291 NA +3155 chr4 + 190214555 115865670 115865669 115865728 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA chr4 + 94230402 43459377 43459376 43459435 43459377 43459376 43459435 59 AAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGA ...::...x.x::x.............x...x.....x.:.xx................ 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 72406293 NA +3485 chr4 + 190214555 115865670 115865669 115865734 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAG chr4 + 94230402 43459373 43459372 43459437 43459373 43459372 43459437 65 AAATAAAGGAAATATGGTAAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAG ...x...::...x.x::x.............x...x.....x...xx..............:... 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 72406297 NA +3004 chr4 + 190214555 115865672 115865671 115865736 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGA chr4 + 94230402 54037031 54037030 54037095 54037031 54037030 54037095 65 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGA .::.....:................:x:..::xx:.::..x:.:...x.........:..:.x.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 61828641 NA +3070 chr4 + 190214555 115865672 115865671 115865759 88 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGATGATTTAAAAAAATATATAGATT chr4 + 94230402 76841607 76841606 76841694 76841607 76841606 76841694 88 AGAGAATACATGAGGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGATTTTGCGGAGACAGAGATATATT .:.:..x.x.x:.::..:.x..:..:::......:.::.....:...........xx....:....xx.x:::.:.x.x.x...x... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 39024065 NA +3220 chr4 + 190214555 115865674 115865673 115865734 61 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAG chr4 + 94230402 54037031 54037030 54037091 54037031 54037030 54037091 61 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAG .::.....:................:x:..::xx:.:...x:.:...x............. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 61828643 NA +3055 chr4 + 190214555 115865680 115865679 115865755 76 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGATGATTTAAAAAAATATATA chr4 + 94230402 43459391 43459390 43459466 43459391 43459390 43459466 76 AAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAGTGAATCACCAGTTAATAAGTAACATA .............x...x.....x.:.xx:...............::x..x:..xx.:x.x....x..:xx.:... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 72406289 NA +3095 chr4 + 190214555 115865691 115865690 115865726 36 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:...............:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40565235 NA +3226 chr4 + 190214555 115865693 115865692 115865728 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................................:. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 40565237 NA +3027 chr4 + 190214555 115865694 115865693 115865734 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAG chr4 + 94230402 13073582 13073581 13073622 13073582 13073581 13073622 41 AAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGAG ...............xx..............:.:....:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 102792112 87422443 +3104 chr4 + 190214555 115865695 115865694 115865730 36 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ................:.................:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40565239 NA +3104 chr4 + 190214555 115865697 115865696 115865732 36 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..............:.:................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40565241 NA +3036 chr4 + 190214555 115865698 115865697 115865738 41 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGATG chr4 + 94230402 47022729 47022728 47022769 47022729 47022728 47022769 41 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGTAGAGAATG .............................:x.x.:..:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 68842969 NA +3366 chr4 + 190214555 115876723 115876722 115876810 88 ATACAAAAATGAGACAGGTGTAGTGGTGGGTGCCTATAATCCCAGCTACTTGGGAAGCTGAGACAGGGGAATCACTTGAACCCAAGAG chr4 + 94230402 76033183 76033182 76033264 76033183 76033182 76033264 82 ATGAAAGGATGATACA----CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:x..::....x...----:.......x::.--.:..:.:...........::.:......x.xx.x...x............::.. 16M4D12M2D54M 60/82 73.2% 82/94230402 0.0% 6/82 7.3% 39843540 NA +3006 chr4 + 190214555 115908778 115908777 115908845 68 ACATATATATAAATATATATAAACATATATATAAATATATATATAAACATATATAAAAATATATATAA chr4 + 94230402 46063299 46063298 46063366 46063299 46063298 46063366 68 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAA .:.:..:.:..x..:.:...:.:..:..:.x:.x:...:.x....x........::x........:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 69845479 NA +3581 chr4 + 190214555 115922398 115922397 115922526 129 AAAGAGAAGGCCATATA--TATACATGTATATATATATACATACACATATATATACATATATATACATGTATACATGTATATATATGTATATATATGTGTATGTATATATATGTGTATATATATATGTATA chr4 + 94230402 21109175 21109174 21109301 21109175 21109174 21109301 127 AAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTAC----CTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...:.x....xx..x.:--.........:.:.x.x.:.:x::::.:x.....:...x:.:......x:..:...----x....::.:.:..:x:...:x.x...:.....:...:.:x....::...:.:. 17M2I55M4D53M 79/125 63.2% 127/94230402 0.0% 6/125 4.8% 94813223 NA +3060 chr4 + 190214555 115922418 115922417 115922492 75 ACATGTATATATATATACATACACATATATATACATATATATACATGTATACATGTATATATATGTATATATATG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ...:::....x:.:..:..x......::...:.x.x....:..:..x.:.:::.......::...:.::..x:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 93322220 NA +3483 chr4 + 190214555 115923523 115923522 115923578 56 ATACATACACACACACATGTATACACACATATATATACACATATATACATTTACAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x..:.............x.:.:.....x........::......::.....x.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 41397449 NA +3061 chr4 + 190214555 115935801 115935800 115935853 53 ATATATATATATATATATATATATACACACACACACACACACACACATATATA chr4 + 94230402 61270775 61270774 61270827 61270775 61270774 61270827 53 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ..:x......x.:.......:....:..:...::.....x....x...:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 54665026 NA +3005 chr4 + 190214555 115935808 115935807 115935848 41 TATATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.............:.........x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 111526726 78687829 +3373 chr4 + 190214555 115935810 115935809 115935883 74 TATATATATATATATACACACACACACACACACACACATATATATTCAAATATTCCAAAATAAAAAAAAATGAA chr4 + 94230402 74671076 74671075 74671149 74671076 74671075 74671149 74 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAA .:..............:...............x.x.x.x...xx.xx...x.x.:x.....:x.:..:..x... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 41264734 NA +3021 chr4 + 190214555 115935815 115935814 115935873 59 ATATATATATACACACACACACACACACACACATATATATTCAAATATTCCAAAATAAA chr4 + 94230402 46140856 46140855 46140914 46140856 46140855 46140914 59 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAA .........:......x.x....:........:.:.....x..:.:x.x.x:..:.x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 69794959 NA +9221 chr4 + 190214555 115993994 115993993 115994267 274 AGACCTGACAGTCTGATGAAAAAGTTCCCATTGTGGCACTATCTTTTAGAAAATATA-TAAATCAAGTGATTACAACCACTTTTTCTTTTTTAAATTGGCCTGTAAAGTTACTGGCAGAAAATCTTTAAATTCCAAATGAAAAATAATAATGCAATAACCACAC------TCAGCTATGACC-----TGAAAAAATGTATAACAATCAATGTAATAAAGACTGTCTAACTTGAGTGTTTTTTTTTTT---------AAAGACAGAATAATACATCCATATATAAAGGTCATTTTG chr4 + 94230402 57342446 57342445 57342719 57342446 57342445 57342719 274 AGATCTTACAGCCTTATAAAAACATCCCCTTTGTGGCATAATCTTTTAGAAAAAAAAATAAATCATAT-----------CTCATCTTTTTGTAAATTGACCTGTAA-GTTGCTGGCAGCAAATCAATAGGATACAAATGAAAAATAATAATGCAATAACAATGCTATGTATTATCTTGGACCCCAGATGAAAACTTGTACAACGATCAATATGATAAAGA---------TTCAGTATCGTTACTCTTTCAGAAAGAAATGACAAAATAACACAGTGATTTCAAAAGGTGGCTTTG ...:..x....:..x..:....x:.:...x........:x.............x.x.-.......x:.-----------..:x.::....x.......:.......-...:.......x.....xx..::x.x..........................x.::.------.:.x..xx....-----......xx....:...:......:.:.......---------..x...:.:x..x:.:..---------..x....:.....:...x:x..x.xx......x::.... 57M1I10M11D27M1D57M6I12M5I33M9D18M9I39M 192/253 75.9% 274/94230402 0.0% 42/253 16.6% 58651548 NA +3800 chr4 + 190214555 115999479 115999478 115999569 91 TCAGGGAAATGAATAAAAGGCAAGGAAACAACAACAACAACGACAACAACATCAACAACAACAACAAAAACAAAAACAAAAAACTACACCA chr4 + 94230402 14362580 14362579 14362669 14362580 14362579 14362669 90 TCAGGATGATGAAAAAAAAGGAGCTTAAAAATGCAAAAAGCAACAACAACATCAACAAAAACAAAAAAAAT-GAAATAAAAAACTGCATCA .....:x:.....x....:.x.:xxx..x..::xx..x.:.:................x.....x.....:-:...:........:..:.. 71M1D19M 65/90 72.2% 90/94230402 0.0% 1/90 1.1% 101636899 88577656 +3334 chr4 + 190214555 116046450 116046449 116046547 98 TCAAAGAGAAAGAAAG--AAAGAAAAAGA-AAGAAAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAG chr4 + 94230402 10269790 10269789 10269893 10269790 10269789 10269893 104 TCAAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG .....x.....:.x..--......:....-..x.......x...::---......::x.x:.....x:..:.......x.xx:.:....::...x:..x...:. 16M2I11M1I16M3I55M 71/98 72.4% 104/94230402 0.0% 6/98 6.1% 105776660 84437895 +3102 chr4 + 190214555 116046455 116046454 116046568 114 GAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAA chr4 + 94230402 7358269 7358268 7358382 7358269 7358268 7358382 114 GGAGAAAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGACCTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAAATGAATAGA .:::..:.:....:.:.xxx..:...:..x...:.:::....:...:.:...x::...:::xxx::...:..xx.::.xx::..x:x...x......:........x:..x.:. 114M 65/114 57.0% 114/94230402 0.0% 0/114 0.0% 108688186 81526369 +3051 chr4 + 190214555 116046466 116046465 116046536 71 AAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGA chr4 + 94230402 41112182 41112181 41112252 41112182 41112181 41112252 71 AAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..:..:....x..x...x...x....x.:..:..xx.x.:.x..........::.x.x......x:..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 74934284 NA +3246 chr4 + 190214555 116046478 116046477 116046559 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x...x.:.........:.x.x.:....x:...:..:.x:.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 74934300 NA +3033 chr4 + 190214555 116046488 116046487 116046605 118 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAGAGAAAGAG chr4 + 94230402 70762130 70762129 70762247 70762130 70762129 70762247 118 AGGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGAAGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAGG .::.:.:....x..x:.......:x..::...x......x::x::..:xxxx.:.:.x.......:..x...xx....:.x:.x.xx:x:xx:.:.....:....:...:.:...::. 118M 69/118 58.5% 118/94230402 0.0% 0/118 0.0% 45284358 NA +3520 chr4 + 190214555 116046498 116046497 116046624 127 AGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAG-----------AGAAAGAGAGGGAGAGAGACAGAGAAG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::.:xx.x...:.....:..........:x.:.::xxx.:.:xx...:x:.:.x.x::..::x..:.:.:...:........:..::..x..-----------.x:...::......x.x.x.:.:..:. 100M11I27M 78/127 61.4% 138/94230402 0.0% 11/127 8.7% 64898119 NA +3007 chr4 + 190214555 116068738 116068737 116068824 87 TGAGACTCCACCCACCACCCCTACCCTCCACAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAGAAGAGAGAAGATCCAAATA chr4 + 94230402 47473545 47473544 47473631 47473545 47473544 47473631 87 TAAGCCTCCTAACGCTTCCCCCCCCCCCTCCAAAAAAAAAAAAACAAACAAAAAACACCCAGAAACAGAAGTATGGAAAGCCAACTA .:..x....xxx.:.:x....:x...:.:x..............x...x......x.xxx.::..x.....x:x.:.:.x....x.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 68595193 NA +3479 chr4 + 190214555 116068767 116068766 116068858 92 ACAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAGAAGAGAGAAGAT-------CCAAATAAGCTCAATTAGAAATAAAAT-----GATAAATATTACAA chr4 + 94230402 78266974 78266973 78267077 78266974 78266973 78267077 104 ACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAACTAAGTTAACTGAATAAACATTATGA .....:.xx...........xx.....:.......:.::.........::.-------...:.....:x...xx.x..x...:x.-----:.....:....::. 51M7I27M5I14M 68/92 73.9% 104/94230402 0.0% 12/92 13.0% 37801793 NA +3616 chr4 + 190214555 116090224 116090223 116090337 114 ATGCAAGCTGGGGACACAATGTCATAGGGTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGTTCAGGAGTTTGAGTCTAGACTGGACAACAGAGTGACAA chr4 + 94230402 76033183 76033182 76033290 76033183 76033182 76033290 108 ATGAAAGGATGATACACAGTGGTGCACG-TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT-----TGGGCTGTAGAACATGATGCCAA ...x...xxx.:x.....:..x:::.x.-......::..........::........x.xx.x...x.......:::...:..:..-----.:.:...x.x....x::..x... 28M1D57M5D23M 74/108 68.5% 108/94230402 0.0% 6/108 5.6% 40057041 NA +4549 chr4 + 190214555 116114177 116114176 116114309 133 CACATATATAAAATGTGTATACACATTTATATATACACATTATATGTGTATATATACTATGTATACACATATATATACATATATATATACACATATATAAAATATATATATATACACATATATAAAA-TGCTCT chr4 + 94230402 63793636 63793635 63793755 63793636 63793635 63793755 120 CACATATAAAATTTGCATGTATGCATATCTATTCACATATAGCATGTGTATA--------------AAATACGTATAAAGATACATGTACTCATGTATAAAATAGATATGTATTCATGTATAAAAAGCTGCTCT ........x..xx..::.:..::...x.x...x:...:..x::.........--------------.x...::....x.x...:..:...x...:.........x....:...x..::....x...:-...... 52M14D61M1I6M 87/119 73.1% 120/94230402 0.0% 15/119 12.6% 52320541 NA +3120 chr4 + 190214555 116144982 116144981 116145026 45 TTTAATAATTAAAAAATACTTAACAAAAGAATTAGCTTTTTTAAT chr4 + 94230402 2757803 2757802 2757847 2757803 2757802 2757847 45 TTTAATAAGTGAAAAATACTCAACAAAGGAACTAGCTTTTTGGAT ........x.:.........:......:...:.........x:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 113387179 76827376 +3053 chr4 + 190214555 116160558 116160557 116160617 60 CTCAATGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCATGCACACACACGTCCA chr4 + 94230402 81805488 81805487 81805547 81805488 81805487 81805547 60 CTGAATGGGGTCTGTGTGTGTGCATTTGTGTGCTTGCACAACCATGTGCATACGCGTTCA ..x........x..........::.x......:x..::.:xx....::..:..:...:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 34355070 NA +3027 chr4 + 190214555 116169224 116169223 116169298 75 CATTTTTTTTGTTTTGTTTTGTTTTGTTTTCAGTCAACACTTTAAATATTTCACTGACTCTCTTCTTGCTTTCCT chr4 + 94230402 87355386 87355385 87355460 87355386 87355385 87355460 75 CACTTTTTTTTGTTTGTTTTGTTTTGTTTTTTGGTAACATTTTCAGAATGTCACTCTCAATTTCTTTATCCTTCT ..:.......xx..................:x.x:....:...x.:x..x.....xx.xx.:.::..::::.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 28813838 NA +3052 chr4 + 190214555 116216480 116216479 116216544 65 AGTGAAAACAAACACACACACACACACACACAAAAAAAAAAAACAA----------CAGTTGGTTGTGCATCTCT chr4 + 94230402 73362651 73362650 73362725 73362651 73362650 73362725 75 AGAGAAAGAATAAACACACACACACACACACAAAAAAAAAAGCCAAACTGGATTTTCAGCTTGTTGAGTGTTTTT ..x....:x.x.x............................:x...----------...:.x....x.::.:.:. 46M10I19M 51/65 78.5% 75/94230402 0.0% 10/65 15.4% 42853829 NA +3204 chr4 + 190214555 116226336 116226335 116226482 147 CACATGACAGTGAAATAAAAGTTGGAAAAAAAAAGAAAGAAAGAAACATAAGAGAGGCCAATAAAAAGCTTTTGGGGGCCAAAAAGAAATAAAAACAGAAAAAAGCTTTCTTTGGCCAAAAAAAAAAAGCAAAAGATTATGCATTTA chr4 + 94230402 55856594 55856593 55856740 55856594 55856593 55856740 147 CAGAGGATAGCAGAAGAAAATGAGAAAAAAGAAAACAAGAAAGAAGATTTTAAGGTTTTTCTAAGCAGTTTTTGAGTGACTACACTAAAGAAACACTAAGAAGAAAATCACCTTACAAAAAAAAAAAAAAAAAAGAGGGATCATTTA ..x.x..:..:::..x....xxx.:.....:...:x.........:xx.xx:..:xx::xx...:x..:.....:.x.x.x.x.xx...x...x..x:.:..:.:xx.:x::.x:.x...........:x......xx:xx...... 147M 87/147 59.2% 147/94230402 0.0% 0/147 0.0% 60369742 NA +3075 chr4 + 190214555 116328308 116328307 116328347 40 TATGTGTGTGTGTGTGTATATATATATATATATATAAAAT chr4 + 94230402 83331413 83331412 83331452 83331413 83331412 83331452 40 TATGTGTGTATATGTGTATATATATATACACACATAAAAT .........:.:................:.:.:....... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 32996895 NA +3286 chr4 + 190214555 116337644 116337643 116337752 109 TTATCACTTTGTAATACATTTTGATGCCTGATAGTAT--GATGTCTCTCAGGTTTTTTTGTTTGTTTGTTTTGCTCAATTTGTTTT-GACTATTGGGCCTTTTTTTCTGACT chr4 + 94230402 64908752 64908751 64908862 64908752 64908751 64908862 111 TTACCATCTTAAAAC-CTCTATGACGACTTATGGAATAAGATGTATCTCAGTGTTTTTTGTTTTTTTTTTTTGTTTGTTTTGTTTTAAATTATTTGCTCTTTCTCCTTAATT ...:..::..:x..:-.x:.x...:.x..x..:.x..--.....x......xx..........x...x.....:.::x........-:.:....x.x:....:.:::.:.:. 15M1D21M2I47M1I25M 74/108 68.5% 111/94230402 0.0% 4/108 3.7% 51428892 NA +3380 chr4 + 190214555 116370013 116370012 116370110 98 ATTAATTCATTCCTTTTTATGACTGA--GTAGTAT---TCCATTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACA chr4 + 94230402 85834491 85834490 85834592 85834491 85834490 85834592 102 ATTAATACCTACCTTATT-TGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA ......x.x.x....x..-..x.x..--.....x.---.::x..:.x...x.....x.................:.xx:....x::...:....:..x..... 18M1D7M2I7M3I65M 73/97 75.3% 102/94230402 0.0% 6/97 6.2% 30535522 NA +3105 chr4 + 190214555 116370043 116370042 116370108 66 TATTCCATTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834598 85834533 85834532 85834598 66 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA .....xx.....:x.................:.xx:...:x.::.::....:..x...:..:.x.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 30535510 NA +3105 chr4 + 190214555 116370062 116370061 116370123 62 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACA---AAAAATGCATGTG chr4 + 94230402 79265519 79265518 79265583 79265519 79265518 79265583 65 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTG .............::........xx........:...:.::.:.::...---...x..::x.... 49M3I13M 47/62 75.8% 65/94230402 0.0% 3/62 4.8% 37104543 NA +3063 chr4 + 190214555 116370064 116370063 116370148 85 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACAAAAAATGCATGTGCAAGTGTATAACTTCTTTTCCTCTG chr4 + 94230402 55892185 55892184 55892269 55892185 55892184 55892269 85 GTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATAAAACTTTGATACTAGAATTTGTGATTTTTTTTTTTTTG ......x...:.:.x.....x.:.:..:....x...:..:...:.:....xx.xx..::xx:.:.x.:.:.:..:....::.:.. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 60477879 NA +3247 chr4 + 190214555 116370079 116370078 116370145 67 TGTGTGTGTGTATATATATATATATATATACAAAAAATGCATG---TGCAAGTGTATAACTTCTTTTCCT chr4 + 94230402 41215473 41215472 41215542 41215473 41215472 41215542 70 TGTGTGTGTGTGTATATATATAGATATATAAGGGAAATGCATGACTCGCTTGTGAAAAGCCTCTTCTTTT ...........:..........x.......x:::.........---:..xx...x.x.:.:....:.::. 43M3I24M 51/67 76.1% 70/94230402 0.0% 3/67 4.5% 75154606 NA +3416 chr4 + 190214555 116418326 116418325 116418515 190 AATACTATGTAAGTGCTGTGTAAGTAGTAGTTATACATTTTTATTTGTATTATTTTTATTATTTTTTATTATTTCATTGGTTTTTATTTAA-----TTTTTAAAAATTTTTGATCTGA-GGTTTGTTGAATTCTCAAATGCAGTACACATGGGTATAAAGAGCTGACTGTACACACACACACACGTGTGTGTATGT chr4 + 94230402 35515272 35515271 35515439 35515272 35515271 35515439 168 AATACTATTTAAAAGCTGTGTAAGCTGTAGCAATACATGTGAACATGTTCTTTTTTTTCTTTTTTTTA-----------------ACTTAAAAATGTTCTTACAGACTTATGCCATCATAGTCTGATTGATCTGTAAATGCAGT-----------TTAATATTTTTCTATATATACgtgtgtgtgtgtgtgtgtgt ........x...:x..........:x....:x......x.xx.:x...x:.x.....x:.x.......-----------------.:....-----..:...x.:.:..x..x:x.x.-:..:..x.x:..::x:.........-----------.x..x.x:.xx..:..:.:..::::::::........:... 68M17D6M5I22M1I25M11D41M 107/162 66.0% 168/94230402 0.0% 34/162 21.0% 80903054 NA +3131 chr4 + 190214555 116421099 116421098 116421171 73 TTTCCTTTTTTCCTTCCTTCTTTCTTTTCTTCTTTCCTTCCATCTCTCTGCCTCTCTGTCTCTCTCTCTTCTC chr4 + 94230402 31624986 31624985 31625055 31624986 31624985 31625055 70 TTTCCTTTTTTTCTTGCTTCTTTATTATTTTTTTTTCCCGGATCTTTCTGCCTC---GTTTCGATCGCCTTTC ...........:...x.......x..x.:..:...:.::xx....:........---..:..xx..x.:.:.. 54M3D16M 52/70 74.3% 70/94230402 0.0% 3/70 4.3% 84796113 NA +3374 chr4 + 190214555 116430977 116430976 116431039 63 TGTATGTATGTATATATGTATATATATGTATATATGCATACATATATGTATATGTGTGTATAT chr4 + 94230402 40388217 40388216 40388279 40388217 40388216 40388279 63 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTAT ...:.......:.x...x..:..:....:....:........x..:....xx.....:xx... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 76042760 NA +3018 chr4 + 190214555 116431009 116431008 116431089 81 TATGCATACATATATGTATATGTGTGTATATGTATACATGTGTACTCATATGTATATATGTGTATATGTATACATGTGTAC chr4 + 94230402 85834533 85834532 85834613 85834533 85834532 85834613 81 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC ...x...x::.:.x...:.:.......:.:.:.xx.::.:x.:.:x........x...::...x....:.:....::::.. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 30596476 NA +3157 chr4 + 190214555 116431087 116431086 116431172 86 TACTCATATGTATATATGTGTATATATGTACATATATGTATATACACACATATATAACACTTATATATATAACATATATATAACTT chr4 + 94230402 6200763 6200762 6200845 6200763 6200762 6200845 83 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGC---TGTCCACAACTTCTTCATAACTT ..:.:x.:..:............x......::.x.:.....x.x........x...xx:.---.:.x:.:...x.x.x:....... 60M3D23M 59/83 71.1% 83/94230402 0.0% 3/83 3.6% 110230324 79984231 +3031 chr4 + 190214555 116431109 116431108 116431150 42 TATATGTACATATATGTATATACACACATATATAACACTTAT chr4 + 94230402 32802014 32802013 32802055 32802014 32802013 32802055 42 TATGTGTGTATATATGTATATACGCACACATACAACACCTAT ...:...::..............:....:...:.....:... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 83629095 NA +3618 chr4 + 190214555 116474693 116474692 116474774 82 TGACAGAGGTTTTTG------GTTTTGTTTTGTTTTTTAATCTAAATCTTTTTTTTTTTTTTTTTCTGGAGAAAGCTGGAAATTAGGA chr4 + 94230402 24508414 24508413 24508497 24508414 24508413 24508497 84 TGACAGATATTTCTGTTTGCAATTTTACCTTGACTTTCA-TCTAAATCTTTTTTTTTTTTTTTTTTTGAAGAAG---GGAAATGAAGA .......x:...:..------:....:::...x:...:.-.........................:..:....:---......x.:.. 15M6I18M1D34M3D11M 63/78 80.8% 84/94230402 0.0% 10/78 12.8% 91966279 NA +3645 chr4 + 190214555 116474958 116474957 116475055 98 GTGGCGCATGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAATTAGCCAAGATCGTGCCAA chr4 + 94230402 76033201 76033200 76033290 76033201 76033200 76033290 90 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ....:...:.--....:.............::........x.xx.x...x.:.........:.:..x:xx:..:..:.:------..x..x:...... 10M2D67M6D13M 66/90 73.3% 90/94230402 0.0% 8/90 8.9% 40441757 NA +3267 chr4 + 190214555 116476732 116476731 116476828 97 AAAATGAGCCAAGGACATGAACAGACACTTCT-CAAAAGAAGACATACAGGATAGACGGCAGAAAGTGGAAGGGCAAGCAAACCTACCAGAGAGGAGT chr4 + 94230402 72515776 72515775 72515872 72515776 72515775 72515872 97 AAAAATAATCAAAGAAATGTGCA-ACATTTCTTCAAAGGAAAAAATAGGAGAGAGAAAGTAGGGGGGGAATGAATAATCAAACTTACCAGAGTGGAGT ....xx.::...:..x...x:..-...:....-....:...:.x...x::..x...x:.:..:::.x.:.x.:::..x.....:........x..... 23M1D8M1I65M 65/96 67.7% 97/94230402 0.0% 2/96 2.1% 43960956 NA +3123 chr4 + 190214555 116486930 116486929 116487008 79 AAGGAAGAATTTGCTCTTTGCTCTTCCTTTATTTCAACTTAGGTTTTTTGGGTTTTTTGTTTTGTTTTGTTTTGTTTTT chr4 + 94230402 26268458 26268457 26268528 26268458 26268457 26268528 71 AAATAAGAACTT--------CTATTTCTTCATTTCCCCTTAGTCCCATTGCGCTCTTTGTTTTATTTTGTTTTGTTCTT ..:x.....:..--------..x..:...:.....xx.....x:::x...x.:.:........:............:.. 12M8D59M 53/71 74.6% 71/94230402 0.0% 8/71 11.3% 90218472 NA +3001 chr4 + 190214555 116499251 116499250 116499325 75 TCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAGAATAAGAAAAAATT chr4 + 94230402 42234767 42234766 42234841 42234767 42234766 42234841 75 TTAAAGAAAAAAGAAAAATAAAAAAAAAGTGAAGCAAGATTAATAAGAAACAGGGAAAGTAGATAAAACAAGATT .:...:......:.....x..........x:..:x..::xx..x..:.:.x.::....:x::....:.x..:... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 74264484 NA +3041 chr4 + 190214555 116499257 116499256 116499332 76 AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAGAATAAGAAAAAATTAGCTAGG chr4 + 94230402 27190006 27190005 27190081 27190006 27190005 27190081 76 AAAATACAGAAAAAAAAAAACAGAAAAAAATGGAAAATACATCAAAAATATGGAAATACAGAAATAATTAATCAGG ....x.x.:...........x.........x:.....x.x.xx.....x.x::.:.xxx.....x.....:::... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 89309251 NA +3227 chr4 + 190214555 116499261 116499260 116499315 55 AAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAGAATA chr4 + 94230402 91257883 91257882 91257937 91257883 91257882 91257937 55 AAAGCAGATAAAAATAGGGAAGTAAAAAGGAAAAAAAAGAAAAAGAAAAAGAGTA ...:x.:.x.....x.::...:x......:...:..................:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 25241378 NA +3456 chr4 + 190214555 116501672 116501671 116501849 178 TTCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTC---TTCTTTCTTTCTTTCTTCCTTTCT-TCCTTTCTTTCTTTTCCTTCCTTCCTTCTGAAAGAAAAATATGTTTTTAAAATAATATCATGGTTTTTATCTAT-CTTTCTGT----------CAATTTTTAGTTG--AAATCTCTTCCTTCTG chr4 + 94230402 63697140 63697139 63697321 63697140 63697139 63697321 182 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAAAAGCTGT-----AGACAA--------TTGTTGCCTATACTTTCTATGCAATACTAACAATTGTTGCTTGGTATATTTCTTATTTTTG ..:.:.....:....:..x...:.:.x....xx.....x.:.:---:::..x....:.:x.xx:......-...::.....::....:.:.:..::x.:.:.:.::....xx...-----.:.:..--------..x..::....-......:.----------.....x..:x...--.x..:....x:..:.. 43M3I24M1I44M5D6M8D11M1I8M10I13M2I16M 111/165 67.3% 182/94230402 0.0% 30/165 18.2% 52804532 NA +3413 chr4 + 190214555 116501677 116501676 116501770 94 TCTTTCTTTCTTCCTTCCTTTCTTTCT----------TTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTCCTTCCTTCCTTCTGAA chr4 + 94230402 40367307 40367306 40367410 40367307 40367306 40367410 104 TTTTTTTTTTCTCCTGGATGTTTTTCTGGGACCTGCCTGCTTTCTCTGTTTAGCATCTGTTTCTGCCTATTCTCTTTTCTTTCTTTCCCTTTCTCCCTTTTAAA .:...:...::....xxx.x.:.....----------.x......:.x..:xx:x.:.x.....x...x.::..:...........:....:..:....:.:.. 27M10I67M 65/94 69.1% 104/94230402 0.0% 10/94 10.6% 76134370 NA +3014 chr4 + 190214555 116501699 116501698 116501742 44 TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTTCTTCCT chr4 + 94230402 49829864 49829863 49829907 49829864 49829863 49829907 44 TTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT ...........:...........:....:..::..:::..:... 44M 35/44 79.5% 44/94230402 0.0% 0/44 0.0% 66671835 NA +3043 chr4 + 190214555 116503650 116503649 116503708 59 TTTGTTTATTTTTAAAATTTATGAAATTTATTCAAAAATGAATGCTTATCCATGCAAAA chr4 + 94230402 15003913 15003912 15003971 15003913 15003912 15003971 59 TTTACTTTTTTGTACAATATCTAAAAATAATTGGAAAATGAATTCTTATCCATGCAAAA ...::..x...x..x...x.x.:...x.x...x:.........x............... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 101499737 88714818 +3676 chr4 + 190214555 116509535 116509534 116509709 175 TTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTCTCTCTTT---------CTTTCTCTCTTTATCTTT---CTTTCTCTCTTTG-------------TCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTT chr4 + 94230402 19215305 19215304 19215505 19215305 19215304 19215505 201 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTT ..:...x:...:..:...x..xx.xxx.....x...:x..:...:x..---------:x...:x::..:......---.x.x:....::..-------------:.:.:.:.:.:::.::.:...:...:...xx....xx.x-......x..::...x......xxx....x.x.....:xx.......:.x...:.... 48M9I18M3I13M13I39M1I57M 113/175 64.6% 201/94230402 0.0% 26/175 14.9% 97294230 92920325 +4010 chr4 + 190214555 116509539 116509538 116509652 114 CTTTCTTTCTTTCTCTTTC-----TTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTC----TCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..::..:.-----.....:...:....:.:x.:::.:.x....xx.....:....xxx:::.:x....x..----.........::.:.::..........:....:.x.:. 19M5I58M4I37M 77/114 67.5% 123/94230402 0.0% 9/114 7.9% 52812422 NA +3016 chr4 + 190214555 116509545 116509544 116509643 99 TTCTTTCTCTTTCTTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895604 32895603 32895702 32895604 32895603 32895702 99 TCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .:..:.:....:..x.:....:..x..x......x.x.:..::x..xx..x.x.:xx:x....:::x:x.:...:.x:.x......x.....:...... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 83613941 NA +3237 chr4 + 190214555 116509549 116509548 116509647 99 TTCTCTTTCTTTCTTTTTCTTTCTTTC--TCTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895604 32895603 32895702 32895604 32895603 32895702 99 TCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCT--TTCTCTACCATTCTTTGTTTCTCTCTTTC .:.........:..x...:..:..x..--.....x.x...:::x..xxx...x..xx:x....:.:::..--......x:.x......x.....:...... 27M2I41M2D29M 68/97 70.1% 99/94230402 0.0% 4/97 4.1% 83613945 NA +3574 chr4 + 190214555 116509566 116509565 116509726 161 TCTTTCTTTCTCTCTTTCTTT---CTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTTTTGACAGGGT chr4 + 94230402 64726428 64726427 64726592 64726428 64726427 64726592 165 TTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTTAAATGAT .::.....:x..::..x..:.---:.:...xxx.....x:.::x:..:.:..xx:...xxx.x:......x::.x.:x.:x...x.-...:x.:.:....:....:x.xxxx.:...:....:.:...:x.........:....::...::.:....x.x.x.:. 21M3I62M1I78M 96/161 59.6% 165/94230402 0.0% 4/161 2.5% 51783138 NA +3863 chr4 + 190214555 116509597 116509596 116509712 116 CTTTCTTTCTCTCTTTGTCT---CTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTT--TCTTTCTTCCTTTTTATTT ....x..:.....:..x:.x---:.........:....:.:x..::.:.x....xx.....x.:.:------..x....:.:x.xx.......:..::......--........::.....x:.. 20M3I43M6I32M2D19M 81/114 71.1% 123/94230402 0.0% 11/114 9.6% 52812480 NA +3106 chr4 + 190214555 116509652 116509651 116509718 67 TTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTTTT chr4 + 94230402 72471342 72471341 72471411 72471342 72471341 72471411 70 TTATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTT ..x:...:.:....x.---...::....xxx......x.:.x.....:.:......:............. 16M3I51M 51/67 76.1% 70/94230402 0.0% 3/67 4.5% 44038310 NA +3023 chr4 + 190214555 116513932 116513931 116513980 49 TTAGTATTCCTAAATTTGAGAGTCTGATGAATCTTTTTCTACATCACTC chr4 + 94230402 60854461 60854460 60854509 60854461 60854460 60854509 49 TTAATATTCCCAAATTTGAGAGTCTAGCACATCTTTTTTTAAATTATTC ...:......:..............::::x........:..x..:.:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 55659471 NA +3054 chr4 + 190214555 116543060 116543059 116543107 48 GTATTGTGTGTGTGTGTATATATATATGTGTGTGTGTATATATATAAA chr4 + 94230402 48958671 48958670 48958718 48958671 48958670 48958718 48 GCACTGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGA .:.:.......x...:..:..............:.:....x....::. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 67584389 NA +3197 chr4 + 190214555 116556840 116556839 116556926 87 TATACATACACACACACACACATACACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATAT chr4 + 94230402 54963197 54963196 54963283 54963197 54963196 54963283 87 TATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT ...x......x.::.....x:...:...........xx...:::.:.x..:.......:x:.:..:x.xx:x.x.x.x..:...:.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 61593643 NA +3141 chr4 + 190214555 116556884 116556883 116556942 59 CACACACACACACACACACACACACACATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 33623598 33623597 33623656 33623598 33623597 33623656 59 CAGGCACAAACACATGCACACACACACATTAATGCATGGTTGGTTTTTTTTTTTTTTTT ..x:....x.....::.............xx..::..:xx.:x................ 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 82933286 NA +3027 chr4 + 190214555 116556886 116556885 116556945 60 CACACACACACACACACACACACACATATATATATATATATTTTTTTTTTTTTTTTTTTG chr4 + 94230402 33623598 33623597 33623657 33623598 33623597 33623657 60 CAGGCACAAACACATGCACACACACACATTAATGCATGGTTGGTTTTTTTTTTTTTTTTG ..x:....x.....::..........:..xx..::..:xx.xx................. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 82933288 NA +3072 chr4 + 190214555 116558244 116558243 116558312 69 GGAGGGTGTTTGTGTCCAAAAATGTATCCATTTCTTCTAGATTTTCTACTTTATTTGCTTAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x.x.:..:....:..:......x.......:....x.x::.x:.x:...:..x.x....:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 38711480 NA +3051 chr4 + 190214555 116561389 116561388 116561450 62 ATGCTTCTATTTATACTTTTTTACATATTCCATATGTATTTTGCCTTTATTAAAATCCAAGA chr4 + 94230402 69351236 69351235 69351297 69351236 69351235 69351297 62 ATGCCTTTTTTTTTTTTTTTTGGCCAATTCAGTATGTATTTTACTTTTATTAAAATGCAGGA ....:.:.x...x.x:.....x:.xx....x:..........:.:...........x..:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 47210153 NA +3048 chr4 + 190214555 116576183 116576182 116576250 68 ACACCAAAA---AAAACAAAAGCAAACAAAGACAAACAACAACAACAACAACAACAACAACAAAAAGCCTT chr4 + 94230402 42575008 42575007 42575078 42575008 42575007 42575078 71 ACATGAAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCCT ...:x....---.........:x....x.xx..x.x..x..x..................x....:x..:. 9M3I59M 53/68 77.9% 71/94230402 0.0% 3/68 4.4% 74001175 NA +3031 chr4 + 190214555 116576190 116576189 116576245 56 AAAAAACAAAAGCAAACAAAGACAAACAACAACAACAACAACAACAACAACAAAAA chr4 + 94230402 14362591 14362590 14362646 14362591 14362590 14362646 56 AAAAAAAAGGAGCTTAAAAATGCAAAAAGCAACAACAACATCAACAAAAACAAAAA ......x.::...xx.x...x:....x.:...........x......x........ 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 102213599 88000956 +3033 chr4 + 190214555 116589711 116589710 116589765 55 TAGTCATTTTACCAATTTTTTTTTTTTTTTTTTTTTTTTGACACGGATTCTTGCT chr4 + 94230402 56953314 56953313 56953368 56953314 56953313 56953368 55 TAATCATTATCCAAATCTACTTTTTTTTTTTTTTTTTTTGACACTTATTGTGGCT ..:.....x.x.x...:.x:........................xx...x.x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 59636397 NA +3045 chr4 + 190214555 116601534 116601533 116601579 46 CTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAATCTTTA chr4 + 94230402 33767119 33767118 33767164 33767119 33767118 33767164 46 CCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAACTCTCTA .:..............x..........xx..:.......x...:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 82834415 NA +5109 chr4 + 190214555 116615375 116615374 116615669 295 GGAAAGAAGGAAGGAAGGAAGAAACAAAGGAAGGAATGAGGGAACAAAGGAA-----GGAAGGAAGGAACGAAGGAAAGAA-GGAGGGAAAG-AAGGAAGGAAGAGAGGGAGGAAGGAAGGAAGGAACAA--AGGAAGGAAGGAGGGAAGGAAGGAAGGAACAAAGGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAGGAACAAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAACAAAGGAAGGAGGGAAGGAAGGAGAGAAGGAAGGAAGGGAGGG---TGGGAGGGAAGAAAGGGAGG chr4 + 94230402 41489126 41489125 41489426 41489126 41489125 41489426 301 GGAGACAAGAATTGAGCGAGAGAGGGAGGAGAGGAATGAGAAGACAAATGAGCTCAGGGCATGAAGTGCCCGGGGAAGGATTGGATGGACTGTCAAGAGTTACAGGAGGGGATTGAGAAGAAAAGCACCTCTGGGAAAGAAGGAGGCAGGGAAGCCAAACGCCTTAGAAAAATGACAGGAGACACGGGAAGGAGCAAGATACAAAATAGGGACATATGGAAACCTAGTAGGAAGGGAAGGGCTGGGGAGGTA------AAAAGAAACACGGATGAAAGGGGGTGAAATTGCAGGGAAGAGGAGGAGG ...:.x...:.xx..:x..:::.:x:.:.::.........:::.....x..:-----..x.x....x:x.x::....:..x-...x...xx.-x.:..:xx.x::.....::xx::....:..:.x..xx--:....:........x.:.....xx.::x:.xxx:...::.x.:x:...:.x.x..:.:.:..x...:x.....:x.:...x:x.x....:xxx:.x.......:.:.::.x::...:.x.------:..:..:.x.x...x.:.....:.x.---.x.x........:::..... 52M5I24M1I10M1I37M2I120M6D26M3I20M 171/289 59.2% 301/94230402 0.0% 18/289 6.2% 75126249 NA +3012 chr4 + 190214555 116615574 116615573 116615643 70 AGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAACAAAGGAAGGAGGGAAGGAAGGAGAGAAGGAAGGAAG chr4 + 94230402 94050835 94050834 94050904 94050835 94050834 94050904 70 AGGAAGAGGGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAAG ......::..:..:......:...:.:..:..xx...:.x:.:x.x:....xx:........:.:::... 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 22564739 NA +4105 chr4 + 190214555 116615577 116615576 116615788 212 AAGGAGGGAAGGAAGGAAGGAAGGAAGGAACAAAGGAAGGAGGGA--AGGAAGGAGAGAAGGAAGGAAGGGAGGGTGG-GAGGGAAGAAAGGGAGGGAGGAAGAAATCGAGAAAGAGAGCAAGAGTATTTACAGAAGGAAGGAAGGAGAAAAGAAAGAAAGAAAGGAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAA chr4 + 94230402 2498459 2498458 2498657 2498459 2498458 2498657 199 AAGCAGTGAGTGAGGGGGGTGAGGCGGGTGCGG-GGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAA---------------CGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ...x..x..:x..:..::.x:...x:..x:.::-...x...x.x.--.:..::x:.......:.:x..x..:.:....-..x..x..x...x.x:....:x:.::.x::.x...---------------::.x..::x....:........x.:....:.xxxxx:...::...:..::..:::...:.....x....x.::..::..x:..... 33M1D11M2I31M1I35M15D86M 119/196 60.7% 199/94230402 0.0% 19/196 9.7% 114117118 76097437 +3025 chr4 + 190214555 116615714 116615713 116615761 48 GGAAGGAGAAAAGAAAGAAAGAAAGGAAGAAAGAGAGAGAGAAAGAAA chr4 + 94230402 81578856 81578855 81578903 81578856 81578855 81578903 48 GGAAGGGGAAAAGAACGGAAGAATGGGAGAGAGAAGGAGAGAAATGAA ......:........x.:.....x..:...:...::........x:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 35036858 NA +3096 chr4 + 190214555 116615737 116615736 116615807 71 AGGAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAA-----AGAAAGAGAATAAGAAAGAGAGAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:..:..:.........:.::.:......x.x...::..-----.x.:...:...:::...:.:.:.. 47M5I24M 50/71 70.4% 76/94230402 0.0% 5/71 7.0% 78536959 NA +3464 chr4 + 190214555 116630422 116630421 116630504 83 CGTAGTGGCATACACCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGAATCACTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....--.:...x......:.........::::..:.....x.xx.x...x..........::.:..x.xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 40597225 NA +3065 chr4 + 190214555 116635121 116635120 116635169 49 AATATAGAAAAATAAGTTATTTTGCTTGTATGCTTAGCTTAATTAACAA chr4 + 94230402 69220859 69220858 69220907 69220859 69220858 69220907 49 AATATAGAAATATAGGCTATTTTTCTTGTGTATTTTGCTTATTTAACAA ..........x...:.:......x.....:.::..x.....x....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 47414262 NA +3088 chr4 + 190214555 116689403 116689402 116689490 88 GCGTGTGTAT--ATTTATGACTATATGTGTGTGCATATGTGCATATGTTTACACACATATATTCATATATATA---TTCATATATATGCATAC chr4 + 94230402 39131745 39131744 39131836 39131745 39131744 39131836 92 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCAC-TATGTGCACAC ....x....:--.xx.:..x..:.x.x......:.x:.......:......x.::...x...:........:.---:...:-...:....:.. 10M2I61M3I5M1D11M 64/87 73.6% 92/94230402 0.0% 6/87 6.9% 77557658 NA +3310 chr4 + 190214555 116711413 116711412 116711474 62 TTAGAAGGAAATATGCAGATTGGTAGTTTCGCTTTCGTTGTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 43946853 43946852 43946913 43946853 43946852 43946913 61 TTGGAAGTAAATGCA-AGATCAGTGGTTCCATTATTGTTGTTTCTTTTTTTTTTTTTTTTTT ..:....x....:::-....::..:...:.::.x.:.......:.................. 15M1D46M 47/61 77.0% 61/94230402 0.0% 1/61 1.6% 72764560 NA +3245 chr4 + 190214555 116720014 116720013 116720108 95 TTGTCATTGCTAAATGATTTTTCATGTGAAGCAAAAAGGATTGGTTTTTTTGTTTTGCATTTTTAGTTTCTTTTTTTTTTCTTTTAAACAGATTT chr4 + 94230402 57134076 57134075 57134170 57134076 57134075 57134170 95 TTGATGTTGTTGTTTGATTGTTTGTTTGTTGAATTGTGGATTGATTTTTTTTGTTTTTGTTTTGAGTTTGTTCTTTTTTTCTTTTCAATTAACTT ...x::...:.:xx.....x..::.x..xx.x.xx:x......:.......xx...x::....x.....x..:............x..:x:.:.. 95M 63/95 66.3% 95/94230402 0.0% 0/95 0.0% 59585938 NA +3066 chr4 + 190214555 116720058 116720057 116720097 40 TTTTTTTGTTTTGCATTTTTAGTTTCTTTTTTTTTTCTTT chr4 + 94230402 47077457 47077456 47077496 47077457 47077456 47077496 40 TTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT ........:.........:.:....:..........:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 69642601 NA +3615 chr4 + 190214555 116742047 116742046 116742129 83 CGTGGTAGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:.....:.--....:.:...........::........x.xx.x...xx..........:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 40708850 NA +3379 chr4 + 190214555 116748867 116748866 116748938 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGCGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.:...........:x.x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 40715661 NA +3128 chr4 + 190214555 116786380 116786379 116786451 72 CATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCACATGCCCATGTATATGTA chr4 + 94230402 85834537 85834536 85834608 85834537 85834536 85834608 72 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ...x.....x.................:.xx:...:x.::.:::.:..:.x::.....:::...:.:.::.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 30951843 NA +3150 chr4 + 190214555 116834870 116834869 116834922 53 GCCAAAAAAAAACAAAAACAACAACAACAACAAAAAAAACAAAAAAAAAACTA chr4 + 94230402 73664710 73664709 73664762 73664710 73664709 73664762 53 GTCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAACCCA .:....xx.x..x.:.......:................x.........x.:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 43170160 NA +3013 chr4 + 190214555 116834872 116834871 116834919 48 CAAAAAAAAACAAAAACAACAACAACAACAAAAAAAACAAAAAAAAAA chr4 + 94230402 14362613 14362612 14362660 14362613 14362612 14362660 48 CAAAAAGCAACAACAACATCAACAAAAACAAAAAAAATGAAATAAAAA ......:x.....x....x......x...........::...x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 102472259 87742296 +3052 chr4 + 190214555 116853265 116853264 116853319 55 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTCGTTATT chr4 + 94230402 18067131 18067130 18067185 18067131 18067130 18067185 55 TCAAAAAGAAAAAAAAACTAAAGAAAACGAGAAGACAGAAAAAACATTCTTTATT .......:.........xx...:....x:.:..:.x.:.......x...x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 98786134 91428421 +3122 chr4 + 190214555 116886798 116886797 116886852 55 TGAAGAAAAGCCATTGACAAAACAAAAAAACAAACAAACACACAAAAGAACGTAA chr4 + 94230402 24234747 24234746 24234801 24234747 24234746 24234801 55 TGGCAAAAAGTCAGTCACAAAAAAAACAAACAAACACACACACAAAAAAGCATAA ..:x:.....:..x.x......x...x.........x..........:.:.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 92652051 NA +3064 chr4 + 190214555 116887473 116887472 116887536 64 AGTGG-GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....-.::.x....:.:...........::........x.xx.x...x.x........::.:.. 5M1I59M 48/64 75.0% 65/94230402 0.0% 1/64 1.6% 40854273 NA +3374 chr4 + 190214555 116897642 116897641 116897748 107 TTCCCATGC--ACATTTGCCATTTTT------GTTACTTTGGTTATTTTCTTTTTTTGTTT----------------------------TGTTTTATTTTGTTTGTTTGTTTGTTTGTTTTGGTTGCCTTTTAGTTCCATAGA chr4 + 94230402 18091382 18091381 18091524 18091382 18091381 18091524 143 TTCTCATGCTTACGTTTGTTATCTTTCAGCTGGTGAGCTGGGCTAACTTCTTATTTCATCTAACCTTTCTGATGAACTTTTCTTCTGAATGATTCATTTGATTTTTTTGTTTGTTTGTTTTGTTTGCTTTTAAGTTCAACAAA ...:.....--..:....::..:...------..x.x:.x..:..x:.....x...::.:.----------------------------..x..:....x:...x.................x....:...x.....x.:.:. 9M2I15M6I29M28I54M 80/107 74.8% 143/94230402 0.0% 36/107 33.6% 98806260 91408295 +3533 chr4 + 190214555 116938051 116938050 116938178 128 GTAAAGTGCAATAAAGTGAAACAAAATAAATGAGATATGC--------CTGCATAGATTAGAATGGTTGATATGTGGGTATATATATATACACACACATATATATGTATATATACACACACACACACACACACAGA chr4 + 94230402 23247651 23247650 23247778 23247651 23247650 23247778 128 GCATAGCACACTACAAGGAAGAAAAGTA--TAAGCTGTGCTTGGTAAGCTGAACAATCCAAGATGACT------TGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA .:.x..::..x..x.:x...:x...:..--.:..x.:...--------...x.:.:x::.::...::.------..:x:..:.:.:...:.........x...:x::....:........:...........x:.. 28M2D10M8I20M6D62M 80/120 66.7% 128/94230402 0.0% 16/120 13.3% 93690400 NA +3019 chr4 + 190214555 116938385 116938384 116938439 55 TGAGTGTGTGTGTGTGTACATATATATACATATATATATATATATATATATATAT chr4 + 94230402 68837096 68837095 68837150 68837096 68837095 68837150 55 TGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ..x.:...............:.:.x.......:...:.:..::.:.:..x.x... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 48101289 NA +3670 chr4 + 190214555 116938527 116938526 116938652 126 TATATATATGTATATATGTGTGCATGTATATATACACATACACATACACATATACCCATTTATAATTGTTTACATATATATGTGTGTATATATATAC-AATATCACTGTAAACAAGGATTATATTTT chr4 + 94230402 21109194 21109193 21109315 21109194 21109193 21109315 122 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACC----TATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGA-GATTACAGTTT ....:..:...:.x.x....x..:.:.x.....::..x:...:....x.:.:....----....xx.:.x...x:..::x.x.........:.:..:-.....xxx..:.x..:.-.....:.x... 56M4D37M1I17M1D11M 83/121 68.6% 122/94230402 0.0% 6/121 5.0% 95829333 NA +13143 chr4 + 190214555 116954006 116954005 116954381 376 GTCCTTTTGTAGTGATGTACA-GGCTCAATATGTTCTATAGATAACACAACATAAGATGAAAATGTGCAGAAATAAAATAAATGGTGTATGAAGATCATCTGTTGTCCGCAGGCAGTGCATTGGCAGCAATTCCGTTTGCTTTACTGCAGTCTTGACAGGCATCCTGCTCCCTGATGGCAGTGCTAACATGCTTTGGCAGTAGCTGCAAAAGCAGCTTTGGGTGATTAAATCTCAGTCTTTTTGTCAGGAAACTGTCTGTGATGTCTTTTCTGAAAACGACATTATGTCTTATTACAAACCATTTTACTTCTCCATAGACAGGCATTACCAATTAAAAGTGTTCATAAAACATGTTTCATTGTTCAGGTCCTTTACC chr4 + 94230402 56721618 56721617 56721982 56721618 56721617 56721982 365 GTCCTGTTGTTGTAACATAAAAGGCTGTGGGTTTTAGAAAGACAGAAAAGTACGAGAT-AAAATGTGCAGAAATAAAACAAATGGTCTATGAGAATCATCAGTTGTCTGTGAGCAAATGGTTGGCAGCAATT----TAGCTTGATTACAGTCTTGAAAATCATCTCCTTCTCTGACAGAAAAGATAACGTGCCTCAGCACTAGCTGCAGAAGTAGCCAAAAGTGCTTAAATCTCACTCTTTCTTTCAGGAAATCACCTGTGATGTCTTGTCTCACAACTACATTATGTCTTATTAGAA---GTTTCTCTCCTATATTGATTGGACCT--CAGTATGAAATTCCCACAGAGCATCTGT--TGGTTAAGGTTTCCTATC .....x....x..:.::..x.-....xx:x:.x..xx.x...:.:x.x.::.::....-...................:.......x.....::......x......:.:::...:xxx:............----.x....x.:.:.........x.:x....::x:..:....::.x.:x.x....:...:.::...x........:...:...:xx::...x..........x.....:.x........::::............x...x.x...x................x..---:...:x..:..x:..x..:x..xx:.--..:.xx:..:.x::..:.:.:...x.x.--.x...x....::::..:. 21M1I36M1D73M4D162M3D26M2D28M2D18M 252/364 69.2% 365/94230402 0.0% 13/364 3.6% 60232388 NA +10866 chr4 + 190214555 116987491 116987490 116987832 342 CAAGGCATGATTTGTGTTTATGGTGAGAAATTGAAAAGGAAAAGATGCAGGGTATATTTCTAA-----------GGATTC---------TACAACCCTATCTGATCAGGCTGATAGCTCTGACCTTCCATTTGTACAG-AGTAAGAAGGTTTCTAATTGTTT-GCAGATCACTTAGCAATTGATGGTGCCATTTTCCTTGGGCAGCCCAT-TTGCCAATCGATATTTTCTGGCAGAGTCAAAGT-TTAGCAAGACATAACGAGAGTAACTGAAATGTCTCCATTAATAGAGAAATCCCACGAGCAGAAAC-----TGTGAGACAAGAGAGTCAAGAAATTTTGTTTATTCCACAAACAAGTACTAAGTTTA chr4 + 94230402 56765014 56765013 56765371 56765014 56765013 56765371 358 CAAAGCAGGGCATATGTT-ATTGAGAGAAGTGGGAAAGTGACAGATGTTGAAGACATTTGTGAACAACACAATTGGGTCCATAGATAGATACAACCGTATCTGATTAGGTAGACAGCTCCATTCATCTATTTGTACAACAGCCAGGAGGTCTCTAATTGTTTTGCAGATCACTTAGCAATTAATGATGCTGTTGCCCTTGGACAGATCATGCTACAGATCAATATTTTCTGGCAAAGTCAAAGGACTGAGAAGACATAATGACAG----TGAAGATACTCTATTAATACAG----CCCACAAGCAAAGGTTGGGGTGTGAGACTTCTTGGACAAGAATTTATCTCTAT--CACCAAAAAGTAT--AGTTTA ...:...x.::x.:....-..x.x.....:.x.:....x:.x.....:x.::x.:....x.:.-----------..:.:.---------.......x........:...:x..:.....::x:.x..:.........:-..:x..:....:...........-..................:...:...::..x:......:...x:...-:.:.x:...:.............:........x-:.::x.........:..x..----....:xxx...:.......x..----.....:....:.:::-----........xxxxx:.x......x..x.x.:...--...x..x.....:--...... 18M1D44M11I6M9I49M1I23M1I47M1I33M1I20M4D22M4D15M5I33M2D13M2D6M 242/329 73.6% 358/94230402 0.0% 42/329 12.8% 60222477 NA +3335 chr4 + 190214555 117002102 117002101 117002189 88 CATGCAAAAACTTTGAAAACATGTGCCTTTCACAATCATAAAATTATCCTTTTTTTTTTTTTTTTTTTTTTTGACAGACAGTGTTACT chr4 + 94230402 31480397 31480396 31480480 31480397 31480396 31480480 84 CATCCAAAAA----AAAAAAAGAAGTCTTTCTCTATTATGAACTTACCCTTTCTATCCCTTTTTTTTTTTTTTACAGACGATTGTATT ...x......----:....x.x:x.:.....x.x..:..:..x...:.....:.x.:::.............x......::.xx..:. 10M4D74M 60/84 71.4% 84/94230402 0.0% 4/84 4.8% 85521705 NA +3023 chr4 + 190214555 117005983 117005982 117006029 47 TATGTGTATATATATATACGTGTGTGTGTGTATATATATATGTAAGT chr4 + 94230402 48308091 48308090 48308137 48308091 48308090 48308137 47 TATGTGTGTCTTTAAATACATGTGTGTGTGTATATATATACTTAAAT .......:.x.x..x....:....................:x...:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 68697892 NA +3766 chr4 + 190214555 117018652 117018651 117018734 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGACGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x.xx.x...x...........:.:..x:xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 40985455 NA +3793 chr4 + 190214555 117019462 117019461 117019532 71 ATATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525765 82525764 82525835 82525765 82525764 82525835 71 atacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA ...:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 34493697 NA +3667 chr4 + 190214555 117019473 117019472 117019549 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493714 NA +3667 chr4 + 190214555 117019490 117019489 117019566 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493731 NA +3667 chr4 + 190214555 117019507 117019506 117019583 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493748 NA +3667 chr4 + 190214555 117019524 117019523 117019600 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493765 NA +3667 chr4 + 190214555 117019541 117019540 117019617 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493782 NA +3667 chr4 + 190214555 117019558 117019557 117019634 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493799 NA +3667 chr4 + 190214555 117019575 117019574 117019651 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493816 NA +3667 chr4 + 190214555 117019592 117019591 117019668 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493833 NA +3667 chr4 + 190214555 117019609 117019608 117019685 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493850 NA +3667 chr4 + 190214555 117019626 117019625 117019702 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493867 NA +3667 chr4 + 190214555 117019643 117019642 117019719 77 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAA chr4 + 94230402 82525759 82525758 82525835 82525759 82525758 82525835 77 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAA .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 34493884 NA +4099 chr4 + 190214555 117019660 117019659 117019758 99 TATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAATATATATATATTGAAAAAAATATATATATATATATATAT chr4 + 94230402 82525759 82525758 82525857 82525759 82525758 82525857 99 tgttatatacatgtatataACAAGAATATACGTATATTGAAAACATATATATAACAAGAATATACACATGAAGAGAAGGATTGTGacatgcatatacat .:..:x.x.:..:......x::.:......::...........:.........x::.:......:.:..:xx..:..::..xxxx.:..::.....:.. 99M 66/99 66.7% 99/94230402 0.0% 0/99 0.0% 34493901 NA +3079 chr4 + 190214555 117064034 117064033 117064089 56 TGACAAGTGGGACAGATTTATAGTTTCCAATTTTAGCTGGGGCCTCAAAATTGCTT chr4 + 94230402 13367324 13367323 13367379 13367324 13367323 13367379 56 TGATGAGAGGGACAGATTTAAAATTTTCAGTTTCACCAGGGGCATTAGAGTTGCTT ...::..x............x.:...:..:...:.x.x.....x.:.:.:...... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 103696710 86517845 +3511 chr4 + 190214555 117080939 117080938 117081021 83 CATGGTGGCGCGTGCCTGTAGTCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:..::.--......:........x..::........x.xx.x...x.::..........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 41047742 NA +3082 chr4 + 190214555 117095826 117095825 117095907 82 TCTCAAAAAAAAAAACAAAACGAAACAAAAAACAACAAAAAAAAAAACCTTTTTCC-----AAAGTGGTTAGAATAAAGTTTGGTTA chr4 + 94230402 61993791 61993790 61993872 61993791 61993790 61993872 82 TTTCAGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAGCATTTTCCCCTTTAAAGCAAT-----TACATTTTGGTTA .:...:...:.....x..:....x.xx..x........x........x.x......-----....:::.-----..x.x........ 56M5I8M5D13M 60/77 77.9% 82/94230402 0.0% 10/77 13.0% 55102035 NA +6916 chr4 + 190214555 117098539 117098538 117098793 255 TTGATTCATATCACTTTTTCTCTATAAATCCAGA---CTGTGGATGGTAATTATTTTTAAATTTTTTAAAATTTTTCTCATATAGAGCAGCACAAAAGACAACT------ACCTTGAA-AACTAAAGTCTGCAAAATGTTGGCAAGGGCAAAGAAGACTGTGCACCACTTATTTCTGACAAGAAAAATGATTCTAATGTCCCTAACATACCACCTTTCTC--------CTTTCTATAGAATGCATCAATCTATGAATGTCACTTTTGCGGCAG chr4 + 94230402 56879009 56879008 56879269 56879009 56879008 56879269 261 TTGGTTCGTGTTAGTTTTTTTTTATTTCTCCCAAGTGCTTCACATTACAATGAATTCCATATTATAGA--------CCCACAT-TAGTGAAGCAGAAGGCAACTGGTCCTATCTAGAAGAACAAGAGCCTGCATAACACTGAGAAGGGCAGAGAATACCATGCAGCATTTATTTCTGACAAGAAGAATGACTTTAATGTCCCT---GTGCCACTCTCCTCACAAATTTCTTTCTACAGGGGACATTAATCAATGTGTGTTGCTGACAAGGCAG ...:...:.:.:.x.....:.:...xxx...x:.---..x::x..x::...x.x..::.x...x.xx.--------.:..:..-x..:::x:..:...:.....------.:..x...-...x.:..:.....x..:::..:x.......:....x..::....x..:................:.....:.:..........---:.:....::.:...--------.......:..::x:...:....x...x:...::..xx::x..... 34M3I31M8D7M1D20M6I8M1I84M3D14M8I45M 165/243 67.9% 261/94230402 0.0% 30/243 12.3% 60219530 NA +3047 chr4 + 190214555 117122936 117122935 117123019 84 TTATGCATTTAAAAATCTTTGACTTATAGAATCTTGGCTTCCTGGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 49471507 49471506 49471590 49471507 49471506 49471590 84 TTGTGGTTTTGAACAGAGTCGACACAGGTAATATTGGCCATTTAGGATCTGTTGTTTTGTGTTTTTTTTTTGTTTTTTTTTTTT ..:..xx...:..x.xxx.:...x:.x:x...x.....:x::.:.:..:.x..x....x.x..........x............ 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 67651429 NA +12030 chr4 + 190214555 117130838 117130837 117131216 379 TTCCCATTGCTTTTGGGTAATTTATGTATAACGTTTTGAATTGCACATAATAAAATTT--------TTATTAATATGGAAAACACTTTTCTTAATTAAAATAAACTC-ATAATTCTTTCAGAATAACTTCTTCTACTTTTTAAAGAGATTTGCTTCATTATCTTCTTATTTAAATTATCTTCAATGCCACACCATTTAATTGAGGTATATGTTTGTGTGTGTGTGCAAGTTCTGAC--TTAAAATTGTGTATTCATCACATGTATTTGTATTTGATTAACGCAATGAATCTTGTTCATGGCAATGTTACCATCTACAAGAGAAAAATAATAAATATTCATCCAAGTGTATATTTCAT----AATATTATTTATAAACTATGCTGTACTTTCATA chr4 + 94230402 56904055 56904054 56904422 56904055 56904054 56904422 368 TTTCCATGGCttttttttttttttttttttAAGCTTTAGATTTTA-ATGAGAGAGCTTAAAAAAGATTATTAACATGGAGGACTGCTTCTCTAATTACAATAACCTTTCCGATTCCTTCGGAAACACATTTCATGC----------GATTTGCTTCATTATCTTTTCATTTAAATCATTTTCAATGACACACCATTTAATT-------AGGTTTGT-----TGTGCAGGTACCGACAGTTAAACTTGTGCATTCAGCACATGCACTTTCATTTGACTAACATAATAAATCTTATTCATGCCAATGTCACCATCTATTACA-AAAATTAACAAGGCATCATCCAGCTAAATTCTCTCTGCTAGATGTTGTTTATAAAGAAT--TTTTCTTTCACA ..:....x......xxx.xx...x.x.x.x.x.:...::...x:.-..:.x.:.::..--------.......:.....::..xx:..:::......x.....x..:-x::....:...:...xx..x.:.:x.:.----------..................:.:........:..:.......x..............-------.x......-----......:..x.:...--.....x.....:.....x......:.:..x:......:....::...:......:......x......:........:x.x.-....x...:..:xxx.......:x.:x..x:.::x.----:..:..:........xx..--.x.x......:. 45M1D12M8I41M1I28M10D55M7D8M5D15M2I82M1D36M4I19M2D12M 258/353 73.1% 368/94230402 0.0% 41/353 11.6% 60226783 NA +3744 chr4 + 190214555 117142625 117142624 117142730 106 AACTTATATATATGTGTATATATACACAGATATATGTGTGTATATGTGTGTGTAGTTTATATATGTATATATACATATATGTGTGTACGTGTGTATTAATATAGTA chr4 + 94230402 74437258 74437257 74437355 74437258 74437257 74437355 98 AACTTATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGT--------TGTACTTGTATGCATCTAGATATGGACCTAGATGTTATTACAGTA .......x.....:....:.....::..x:.x:..x............::...--------.:.::x.:...:...x..x:.:..x..x.:x:.:...x..:.... 53M8D45M 68/98 69.4% 98/94230402 0.0% 8/98 8.2% 42705367 NA +3237 chr4 + 190214555 117142730 117142729 117142964 235 ATGTATACACACATATGTATATATATGTTTGTATATGTATACACATACATACACACATATATACACACACATATA--------------TAT---ACACACATATAATGAGTTT-----TGCTAAAAACATAGTAAGTCATAAAAAA---TTAAAATAAATTATCAAATTGTGATAAAACATTGAAAAATAATAAATACGGAGGACAAA-----TAAAGATGAATGTACATTTCTAATTAATCCAAGTTAAGAAGAAATAAAACA chr4 + 94230402 89748650 89748649 89748907 89748650 89748649 89748907 258 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACAGTCCCTGTCATTTTTATCGGACACTCATGTAACAAATTCAAGGGAGTTATTCTCAGAGAGTCTCATAAAGAAAACATAACATAAATTATAATACT-TAATGGGCATTTAAAAAAT------TTTGGTTGACAGACTGCTTTAAGTAGGAGATATTGATATAATTAAATGTAATTGAAGAAAAATGGAATA ....:....:.:..:.xx:x:...:..xx...:.....x.:::..:.:.:......x.....:x.x.......:.--------------...---....x...:...::.:..:-----x.:..xxxx..x..x:xx.......:..---x...x.........x.x.:.-.:..:::xxx..:......------.x:..xx....:.-----.x...xx.:.x:..:xxx.x.......x:xx.:..:.::.:....::..:. 75M14I3M3I19M5I28M3I20M1D19M6D13M5I51M 144/228 63.2% 258/94230402 0.0% 37/228 16.2% 27394080 NA +3186 chr4 + 190214555 117142743 117142742 117142787 45 TATGTATATATATGTTTGTATATGTATACACATACATACACACAT chr4 + 94230402 65653146 65653145 65653190 65653146 65653145 65653190 45 TGTTTATATACAAGTTTGCCTATGTATACACATACATACACACAT .:.x......:.x.....:x......................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 51489597 NA +3181 chr4 + 190214555 117191991 117191990 117192092 102 CTTTTTTCATGGCTGCATAGTATTCTATGATGT-GTGTGTGTGT---GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACA chr4 + 94230402 85834487 85834486 85834592 85834487 85834486 85834592 106 CTTTATTAATACCTACCTTATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACA ....x..x..:x..:.x.x:.x.x.:.x:....-..x..x..x.---:.x::.x.....x...................xx..:..x::...:....:..x..... 33M1I10M3I59M 71/102 69.6% 106/94230402 0.0% 4/102 3.9% 31357504 NA +3271 chr4 + 190214555 117192010 117192009 117192098 89 GTATTCTATGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC-CACAT chr4 + 94230402 85834518 85834517 85834607 85834518 85834517 85834607 90 GTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ...x.:.:x.x.x.x.:.x::.x.....x.................:.xx:....x::...:....:..x...:..:.x..::.-..... 84M1I5M 61/89 68.5% 90/94230402 0.0% 1/89 1.1% 31357492 NA +3557 chr4 + 190214555 117192020 117192019 117192093 74 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC chr4 + 94230402 85834538 85834537 85834611 85834538 85834537 85834611 74 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACAC ..x.....x.................:.xx:...:x.::.:::...:..x...:..:.x...::.:.:...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 31357482 NA +3069 chr4 + 190214555 117192021 117192020 117192088 68 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 39131750 39131749 39131817 39131750 39131749 39131817 68 TGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ...::.::x......x...x.x.......:x.....::.....x..x..::..x...x:.......:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 78060271 NA +3427 chr4 + 190214555 117192021 117192020 117192093 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC chr4 + 94230402 85834541 85834540 85834613 85834541 85834540 85834613 73 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC .....x.................:.xx:...:x.::.:::.:.:..x...:..:.x...::.:.:...:.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 31357480 NA +3063 chr4 + 190214555 117192022 117192021 117192100 79 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCACATTT chr4 + 94230402 79265519 79265518 79265597 79265519 79265518 79265597 79 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCT .............::........xx...:.:.:::.::::..:.::.:.:::.x.:....x.:.:.x:...x...x.:. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 37926503 NA +3070 chr4 + 190214555 117192022 117192021 117192096 75 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCAC chr4 + 94230402 39131747 39131746 39131821 39131747 39131746 39131821 75 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGC ..x...::.::x......x...x.x.......:x.....::.:.:.x..x..::..x...x:.........x.:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 78060275 NA +3099 chr4 + 190214555 117192022 117192021 117192099 78 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCACATT chr4 + 94230402 39131745 39131744 39131822 39131745 39131744 39131822 78 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCT .:..x...::.::x......x...x.x.......:x.....:..:.:.x..x..::..x...x:.....:..x..::. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 78060277 NA +3015 chr4 + 190214555 117192024 117192023 117192102 79 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCACATTTTT chr4 + 94230402 79265519 79265518 79265597 79265519 79265518 79265597 79 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCT .............::........xx...:.:.:::.:::::.:.::.:.:::.x.:....x.:.:.x...x...::.:. 79M 48/79 60.8% 79/94230402 0.0% 0/79 0.0% 37926505 NA +3341 chr4 + 190214555 117192025 117192024 117192098 74 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC-CACAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.................:.xx:...:x.::.::....:..x...:..:.x...::.:.:.:..-..... 69M1I5M 53/74 71.6% 75/94230402 0.0% 1/74 1.4% 31357484 NA +3391 chr4 + 190214555 117192027 117192026 117192092 66 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACA chr4 + 94230402 85834541 85834540 85834606 85834541 85834540 85834606 66 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA .....x.................:.xx:...:x.::..:....:..x...:..:.x...::.:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 31357486 NA +3553 chr4 + 190214555 117192029 117192028 117192093 65 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC chr4 + 94230402 85834541 85834540 85834605 85834541 85834540 85834605 65 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACAC .....x.................:.xx:...:x.:...:....:..x...:..:.x...::.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 31357488 NA +3362 chr4 + 190214555 117192031 117192030 117192093 63 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACAC chr4 + 94230402 85834541 85834540 85834603 85834541 85834540 85834603 63 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCAC .....x.................:.xx:...:x::...:....:..x...:..:.x...:... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 31357490 NA +3083 chr4 + 190214555 117192036 117192035 117192092 57 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACA chr4 + 94230402 79265519 79265518 79265575 79265519 79265518 79265575 57 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACA .............::........xx........:...:.::.:.::.:.:::.x... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 37926517 NA +3005 chr4 + 190214555 117192037 117192036 117192089 53 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834593 85834541 85834540 85834593 53 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT .....x.................:.xx..:..x::...:....:..x...:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 31357496 NA +3089 chr4 + 190214555 117192046 117192045 117192102 57 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCACATTTTT chr4 + 94230402 68837095 68837094 68837148 68837095 68837094 68837148 54 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCA---CACATTTTT .....:.............:.:.:.x...:...:...:.:..::.---......... 45M3D9M 43/54 79.6% 54/94230402 0.0% 3/54 5.6% 48354951 NA +3543 chr4 + 190214555 117196755 117196754 117196809 55 AAAAAGAAAAAACAACAACAACAACAACAAAAACTCTGCATGGCTTTTACCACTA chr4 + 94230402 66076822 66076821 66076876 66076822 66076821 66076876 55 AAAAAAAACAAACAACAACAACAACAAAAAAAACCCTACATATCTTTTGTAACTA .....:..x..................x......:..:...:x.....::x.... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 51119933 NA +3643 chr4 + 190214555 117198456 117198455 117198560 105 TATATATATCCCACATATTTATATACTATATATAATATTATATATATCCCCCATATATATAATATATATAATATAATATATTATATATAATATATATAATATAAT chr4 + 94230402 26320246 26320245 26320348 26320246 26320245 26320348 103 TAAATTTATCTCACATGT--ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ..x..x....:.....:.--........:....x....xxxx.....x.xx:....x...x..:...x.....xx....x..xx:...x:.....:.....x.:. 18M2D85M 74/103 71.8% 103/94230402 0.0% 2/103 1.9% 90878210 NA +3397 chr4 + 190214555 117198571 117198570 117198670 100 ATAATATATATAATATAA-----TATATTATATTATAATATATATAATATAATATATTATATTATAATATATATAATATAATATATTATATATAATATATTATTT chr4 + 94230402 26382892 26382891 26382995 26382892 26382891 26382995 104 ATAATTTGTATAATGTAAACACACACATTACAG-ACACGCTCTATTAAAGTACATAATGTATTGTAATATATATAATGCAATGTATGATTTATAATACAGTGTTT .....x.:......:...-----:.:....:.x-.:.xxx.x...x.x.xx.:...x.:....:.............::...:...x..x.......:.x.:... 18M5I10M1D71M 71/99 71.7% 104/94230402 0.0% 6/99 6.1% 90815679 NA +42347 chr4 + 190214555 117210316 117210315 117211096 781 ATTTTTTCGTATTTACACAATTTGGAATTATATTAACTCTTC-ATATAAAAATCTGTGTTTTGAAATATTACTGTGGATAAATACACATTACTT-----AAAATAATTTTCAAAACAGCAAAATACAGAATGAGACAAAA-TGCTGATGAAGAAGATGTCTACCCATCAACAAACCATTAGCAATTCCAGCTTGTGCTCTACAATAAAACATGCTGTGTAGAAGTGATTGCATTTGAAGTTATTGGTACATTTGAATGCAAACTACCCAACCATGAAAAATGAGGCTTCCATTTGCTATAAAAATAAATTAAGAGGCAATGCTTTGCTGGCAAAGCCATTTGAGCACCTCAGTTCATAACTATTCATGGTACCATTAACAGATGTCTTTGCTCGCACTGTGAGCTGCCTTATGATATTGTTATATTCAGCATTGTTTTATATCTAAAGTGAATGTAGGAAAC-TTGTTTGAGGATATAATAAAACCTATCCCAATGTAGAGATCCTGTGGGAAATTATACAATAATGTTACCTACATAACTAATTTTCTTCTTATGAAATCATGATTCCCACTACACTTTTAGAGCTATTGAAACTATTGTTTAGCATCACCATTTCCATGTTAATATCTCAGTAAATCACACAAATGTAATACTTGGTGCAGAAAGTGAGCCATTTCCTTTGGGAACATGAGTTTTCACTTCTAAATAAAAAGTTGCATGAAGTGAATACTAAGCATGTTGCATGTTGCTTATTGACATTAAAAGTACTTT--TTTTCTTAAAAGAATAA chr4 + 94230402 56947914 56947913 56948687 56947914 56947913 56948687 774 ATTACTCTTCATTTGTATGATAAGAAATTAATTTAAGTCTTCTGTACAATAAGCAGTCTTT---------AATGTAG-------CACATTCCCTTTCATGAACTAATTAAAAAAAAAAGAACATAAGGATTCATATGAAACTGCTGATAAAGAAGAGGACTACCCACCAACATGCCATTAGCTATTGCCTCTTATGTTCTCAAATAAAACACGCCGTGCAGAAGCTATTGCCTTGGAACTTATTCATACATTTGAATGCAAACTACCAAACCATGAAAAATGAGGCAACCATTTGCTATAAAAATAAATTAGGAGGCAATGCGTTGCTGGCAAAGCTGTTTGAGTACCACAGTTCATAACTATTCATGGTACCATTAACAGATGTCTTTGCTTGTACTGTGAGCTGCCTTATGATATTGCCCTATTCAGCAGTACTTTATATTTAAAGTGAGTGCAAGCAACTTTGTTTTAGAATATAATAAAATCTTGCCTGATGTAGAGATCCTATGGGAAATTATTGTATAATGTTACCTACATAACTAATTTTCTTCTTACGAAATCATGATTCCCACTACACTTTTAGAGCTATTCCAAGTATTGTTTAACATCACCATTTCCATGTTAATATCTCAATAAATCAGAGAAATACAATACTTCATATGAAAAGTGAGCCG-TACCTTGGGGAACATAAGTTTTCCTTTCTAAATTAAAAGGGGAATAAAATTGATGCTGAATGTACTGTATGTTGTTCAAGGGTAGTAAAAGTACCCTAGTGCTCCTAACAGAGCAA ...x:.::x:....::.::..xx.:.....xx....x.....-:..:..x..x.x..x...---------.x...:.-------......x.:.-----:..x.....xxx....x.:x..x...x:..x.x.x.::...-.......:.......x.x.......:.....x:........x...x.xx...:..:...xx.........:..:...:.....:x.....x..x...x.....x:.....................x..................xx.......................:..........x.............::......:...x...........................................:.:........................::x.........x.::.......:........:..:.:.x...-......x..:...........:..xx..::.............:...........xxx.................................:...................................xx..x.........:...........................:.......x.x....::.......x:.::::..........:-.x....x........:.......x:........x.....xx.x..:..:.x:..:..:.:::.::..:......:.:.xx.::.x.........::.--.x:..:...x...::.. 42M1I18M9D7M7D10M5I41M1I321M1I211M1D97M2I17M 612/764 80.1% 774/94230402 0.0% 27/764 3.5% 60262402 NA +3111 chr4 + 190214555 117246983 117246982 117247046 64 CTGCTGATTTTTCTGTTGGTAAACTCTCTGTTCATGGTCTTCTAACCAAGAAAGAAAGAAAAAA chr4 + 94230402 37013588 37013587 37013651 37013588 37013587 37013651 64 CTGTTTGTTTTTCAGTTGGTAAGCTCTTTGTTCATGGTCTGTAAGCAAAGGATTAAAGTAGCAA ...:.x:......x........:....:............x:x.:.x...:.xx....x.:x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 80233395 NA +3249 chr4 + 190214555 117247858 117247857 117247921 64 GTATATATATGTATGTATGTATATATGTCTGTAGGTGTGTGTGTATGTGTGTATATATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...........:....:.x....:.x.:x.x:.x:...:.......x.....x.......x.:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 40538267 NA +3051 chr4 + 190214555 117249858 117249857 117249955 98 TTAGACAGAACAAAGTTTTCTAAAGTATTTATCTGTTCTTAGAAAAAAAAAAAAAGCTATAAGAGGTTTTGTATTTTAATTGTAAAATCTGTTTCTTT chr4 + 94230402 5731129 5731128 5731226 5731129 5731128 5731226 98 TTAAACCTAATAAAGTCCTTCATTGAAACTAAAGATTCTTAGAAAAAAAAAAAAACAGAAATAAGTTCCTGTTTTTTTTTTGTAGGATCTGCACTTTT ...:..xx..:.....::.::.xx.x.x:..xxx:....................xxx.x.x:..x.::...x....xx.....::.....:x::... 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% 111518729 78695826 +3356 chr4 + 190214555 117270825 117270824 117270923 99 ATTATAAACTAAATAATAGTTTGTATAAATGTTAAATTTTGTGAATTCAATAATTGTATATGGTTAATTAAGAATATATCCATTTTGTGGGAAAAAAAC chr4 + 94230402 54463093 54463092 54463191 54463093 54463092 54463191 99 ATTATGTCTTAAATAATAGCTTGCGATAATATGAACTCCTTTGTACTGGTTAGTTGGAAATAGTTTATTATAAATAGAGCCATTTAATGTAAAAGAAAC .....:xx:..........:...::xx...:.x..x.::.x..x.:.x:x..:...x.x..:...x....x:....x.x......x:..x:...:.... 99M 65/99 65.7% 99/94230402 0.0% 0/99 0.0% 62807732 NA +15540 chr4 + 190214555 117289547 117289546 117289927 381 AGATTTAACGATATTAATTTACATATGTGCACAGAGAAATTTAATATTTGAAAATTTAATTCTCTGAAGTATATGGTTTATACCAATTCTTA----TCTTGGTTTATCTGCTCGAATAAAATGATGTCCATTTATCCTTTAAATGTCAAATATGCAATATATATTTTGCAATGGAAAGAGCCCATTAGAGTACAAGGTAATGAACTCCTTTCAAGTATATTTTATGATTATGACATGTGTTTCAACAATAATTTCATATTTTACGCAAATCTGCAAAT-TTTCCATTTTGAAAAGATGTGCTTTATTCTTTAATACTACAATTTAAGAAAGTGATATTTACATCACAGTTTGTAATAGGTGGCTGTAAATTTTAGTAGCATTTCTC chr4 + 94230402 56989445 56989444 56989829 56989445 56989444 56989829 385 AGAGACAAAAATAGTATGTTGCACCTAAGCAAGGAGCAAATGATTTTTTGAAATATTGGATTCTTAAACTGTACTGTGTATAACAATTCTTAACCATCGTAGTTCATCCATCCAGATAAAATGGTACCCATTTCCTCTTTAAATGTCAAATATGTAATATGTATTTTGAAATAGAAAAGATACCTTAGGGTACATGCTAATGTACTCTCTTCAATTACATTTTATGATTATGACCTTTATTCCAACAATAATTTAATGTTTTAATTAAATTTGCAATCATTTTCATTTCTGCAAGATGTCTTTCATCTCTCTGTACTGTAATTTAATGAAGTGACTTTCA-ATCACAATCAGCAATATCTAACAATAAATTTGAATAACATTTTTC ...xx:..x:...x..xx..:..:x.:x...x:...x..x.x.x.x.......xx..::x.:::.:..x.:..:x..x....x.........----..x.:...:...::::.::........:.::......x::..................:.....:.......x...:....::::x.x....:.....x.x.....x....::.....x..:................x.x.:..:............x..:.....xx:....:.....x:-...:.....:x:x.......x:..:..:::.:x:....::.......x:......:x..:.-......:.:x.:....xx.::.x:.......x.:..:.....:.. 92M4I182M1I61M1D45M 265/380 69.7% 385/94230402 0.0% 6/380 1.6% 60300102 NA +11931 chr4 + 190214555 117302833 117302832 117303409 577 TCAGACTGCTGTAGC--TCAAAA---ACTAAAAAGTAAATTTCTCTTACATTCATAAGTGATTCTTTGGTTGAATTTGCTTTAAATTGGGCATGAAATAAATGTATTACTGAAAAAGCAAGGAAACAAAATCTATTACGAACT-----TGAATC-TTGAAATAGCAAATCTT---CTATGGTATGGTATTTTCCCTGCTATTGTTTTGCTTTATTCATTGTTAAAACTTCGTTGAAAAGCAATTATGTTGTCCTTTCTT----CTTTTATTACTAATAAATTCAATATTAAT----------GTATTTGGCTTATTCTTAAAAGACAGCAAGGATTTTAAGGATTTTAAAGCCTCTGTTGGTCTGGTGACTAGTA------TATATTGTCTTTTTTACTATCTTTTCACAGATTTCTCTTGCATGATCTCAAATATTCTTAATATCCTAAAATGCACA-ATTTAAAATTA--AAATTTTA-----TTTCTTGATGATTATAAGATG----------GTCCACTATTAACAACAATTATTTAAAAATGCAAGGAATCAAATTTCCAGTGCTTTCAACCATATGGTTTTTTCCCTTTTGTCTTAGTGCTGTGATTAACTTG-----TTAAATAAAC chr4 + 94230402 57003466 57003465 57004044 57003466 57003465 57004044 579 TCATGCTGATGTAGTGTTCAAGATGAGCTGACAAGTGACACTCTAGTATATTTATACAGAATTCTGTGGCTAACTTTGCTTTAAATTGGGCATGTAACGAATGCATTACTGCAAAA-CAGGGAAATAAAACCTATTATAGGATAGAAATGAATCATTGCAATGGCAAATCCTTTGCTAAGCTGCAGCATTTTCTTTGTTACTGCTTTACTTT-----------AAACTTTGGTGAAAAGCAATTACTTTATTCTTTCTCTTTACTTTTATTACTGGTGATTCTTATGCTAATTTTCCCTCCCGTATTTG----ATTTTGAAAA---------GCTTTTTGGCATTT--AAGATTAAATTGAATTGGTGA-TAGTGCCCCGTCATCTTCACCTCCTACCTTTCTTCTCCCCAACCCCCCCAGCA-GATCTGAAGAATTCTTAAGA----AAAACGAACATACTCAAAGCTACCACATTTTAAACTGCTTCTTGTT--CTAGAAAATGCGAAGTCAGCATCCCCGA--AACATCAG------AATAATCCAAGTAATTTAATTTC-----TTTGCAAT-------TTTTTTTCCTTTTGTGTTAAGCTTGTTATTAATGCAATAGCTTGAATAAAC ...x:...x.....:--....:.---:..:.x....:.xx:...xx..:...:...x:x:.....x...:.:.x....................x..::....:.......x....-..:.....:....:......::::x.-----......-...x...:.......:.---...x.x.:::.:......::..:..:..:...:....-----------......:.x.............:x..:.:......:----...........::.:.x.::x..::....----------.......----...:.x....---------.x....x:.x....--...x:.xx:...:x:......-....:------:..x..xx.:.::.xx..x....:..x.x:.:::.:.:x...-.....x..:x........x.----....:.x...-.:.:...::..--.x......-----:......x.--:..x..:...----------:...x.x.--....x..:------..x...x....x...:x......-----:..x...:-------......:........x...:xx:...x.....:x::-----..:....... 15M2I6M3I90M1D26M5I6M1I17M3I37M11D36M4I29M10I7M4D10M9D14M2D21M1D5M6I42M1D20M4D10M1I11M2I8M5I9M2D10M10I8M2D8M6D23M5D8M7D36M5I10M 378/522 72.4% 579/94230402 0.0% 112/522 21.5% 60299367 NA +3054 chr4 + 190214555 117317325 117317324 117317389 65 TATATACAAATTGTGTGTGTGTGTGTGTATATATATACATATATATACACACACACACATATATG chr4 + 94230402 1268310 1268309 1268374 1268310 1268309 1268374 65 TATATATGTATTGTGTGCCTGAGTATGTAAAATTCCATCTAGATATACAAATACACACATATATG ......::x........:x..x..:....x.xx.x:.:x..x.......x.:............. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 116049015 74165540 +3090 chr4 + 190214555 117325836 117325835 117325897 62 GGAAGTAAAAGTATTCCATTTTTTTCTTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 68974669 68974668 68974730 68974669 68974668 68974730 62 GGAAGAAATACAAATCTACTCTTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTG .....x..x.xx.x..:.:.:......x......xx.:::...................x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 48351167 NA +3232 chr4 + 190214555 117325867 117325866 117325933 67 TTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTAGATCCACAGAGCTTGCTGGGTTCAATAAGG chr4 + 94230402 83024464 83024463 83024530 83024464 83024463 83024530 67 TTCCTTTTTTTTTGTTTTTCTTTTTTTTGTCCTGTTAGTTCTACTGAAACAACTGATTTGAATGAGG .............x.....:........x.xx......x..:..x..:x:x:...:x..x...:... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 34301403 NA +16463 chr4 + 190214555 117346585 117346584 117347021 437 TTGCTTTTATTTCCCATTTAGTGTGCCACTTAAATCTATAGGGTTAGAAGTAA-CAGTATAGGCATTAAAACTAGAAAATTCTAGGAGAAATAGAGGTGAAACAGTAAACAAAATATTTCATTGACATTGAGCTTTCAGTCATGCTGACAGT--TTCTAAAATA-TTACCAGGATCAGTGCATAGATCTCGCTAATATGACCTAGGAAACAGATTTGATTATTTTGCTTGGAAATGTTAATTCCTTTAACCCTGTAAGTGTTTGCCAATTTATAAATGACTACGTGAATCTTTCTTGTCTTTAGCTATCTTCATAGTCATTCTGGGTAATTATCTAATGTTGATCAGGTTGTGTGACTGATTGATTATTTTAGCCTGTCTGTTAGGTACCCTGAAATTTATGCAATTTCTTGCCCACATTGGTGCCCTGGTAATATAAAAC chr4 + 94230402 57020176 57020175 57020613 57020176 57020175 57020613 438 TTTTTTTTTTTTGCCATTTAATTTACCACC-GGATCAATAGAGTTAAATGTAAGTACTGTTAGTATTAAAACTCTCAAATTCTAGGGGAAATGGAGGTTAAATGGTAAACAAAATATTTCATTGGCATTGATCTCAAAAGCAGTCTGACAATACTGCTAAAAAAATCATCAGCTTCCACATATAAATCTCACTGAAGTGAC--AAAAGATGGATTTGGTTATTTTGCTTTGCAAGGGTCATTCCTTTAAAGCTGGAAGAGTTTATCAATTTATAAAAGATTAAATGAACCATATTTTCCTTTAGTTCCTGTCACAACTCTTTTTTGTGATTATCCAGGCTTGATCAGTTTATGTGAGTGACTGATTATTTTCATCTCTACTTTATGCAACCTCAGATTTGCAGAATTTATTACCCATGCTAGATCATTTGTGATAAAAGAC ..x:....x...x.......:.x.:....:-::...x....:....:.x....-:.x.:.x:.:.........xxx..........:.....:.....x...::....................:......x..:xx.:x..xx......:.--.x......x.-.:.:...xx..x::::...:.....:..:.x:....--.::.:.::......:...........x.x..x.x.x..........xx...x...x....::...........x..:..x:....:.x.x:..x:......:.x::x...:.:::x..:.xx..:......:.:xx........x..:.....x...:..........x::..x.x:x...x.:.x...x.:....:::x.....x..:....:::.:.xx.x:.x..:...x..:.. 30M1D22M1I98M2I10M1I36M2D238M 301/434 69.4% 438/94230402 0.0% 7/434 1.6% 60326409 NA +3156 chr4 + 190214555 117366206 117366205 117366285 80 TTTTGTATTTGTTTTAATCATATGTGTGTGTGTGTGTGTAT----------ATATATGTGTGTATATATATATATATATATATATATACA chr4 + 94230402 85834528 85834527 85834614 85834528 85834527 85834614 87 TTTTTTATTCATTTGTGTC---TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ....x....::...xx:..---...................----------...:..:...:x...:..:.x...::.:.:...:.:... 19M3D19M10I39M 58/77 75.3% 87/94230402 0.0% 13/77 16.9% 31531678 NA +4078 chr4 + 190214555 117366217 117366216 117366320 104 TTTTAATCATATGTGTGTGTGTGTGTGTATATATAT--------GTGTGTATATATATATATATATATATATATACAGTCATATATCGCCTACTGATGAGAATTTTCTTTTG chr4 + 94230402 85834530 85834529 85834636 85834530 85834529 85834636 107 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTG-----GGGAATTTTCTTCTG .....x....x.....x...........:.:.:...--------.::.::....:..x...:..:.x...::.:...xx..:.:..x....:-----.:..........:.. 36M8I48M5D15M 73/99 73.7% 107/94230402 0.0% 13/99 13.1% 31531687 NA +3539 chr4 + 190214555 117366219 117366218 117366453 235 TTAATCATATGTGTGTGTGTGTGTGTATATATATGTGTGTATATATATATATATATATATATATACAGTCA--TATATCGCCTACTGATGAGAATTTTCTTTTGACATGAAGCTGAAGCTATAGA-ACTGAAGTTGCAAGTTCTCTCTGTGTTTCATGTGTCT-GTAATTGAGAAAATTTTACTTTTTATTAAGAGTGTGAAATATT---------TTCCTATTTCTGCAGAATATTAAAAATTCATT chr4 + 94230402 21429690 21429689 21429913 21429690 21429689 21429913 224 TTAATCATATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTAAACA-----AGTCAACTTCATAGTATACTGGATAAAAT----------CAAGAAGTT----CTGTAGATACTTAAAAT--AATTTCT---TAAATTCCATAAGTCTAGTTATGTTTACAGTTTTATTCTTGGTTCAGTGCATGAACTACGTCTGAAAAATTATCATTGTTATAGATTATAAAATATTTCTT ..........:x::..x.x.x.xx..x.............:.............:..x.:.-----.....--.x:..x.:x.....:xx.:...----------..x....:.----..:....-...x..:x.--..x....---.:x:..:...:x....-..x..xxxx.x.:.....:.:..x:..x..x.::....x..:x---------..x::...x:.::...x...x...x...:x.. 61M5D5M2I22M10D9M4D7M1I9M2D7M3D16M1I43M9I32M 145/211 68.7% 224/94230402 0.0% 37/211 17.5% 95936529 NA +3018 chr4 + 190214555 117366230 117366229 117366270 41 TGTGTGTGTGTGTGTATATATATGTGTGTATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x...:.::.....................x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 68407555 NA +4069 chr4 + 190214555 117374849 117374848 117375035 187 TGGTAAATGTATCTAAAA---------CCCAGTACATTTGACCAGTTTCTAGGAAATAAAGATAAAAAATTAAACTTACAAACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATAT------------ATATATGTACATATATGTTTAAAAGTATACCCGGTTACATAATATAAATA chr4 + 94230402 27702210 27702209 27702406 27702210 27702209 27702406 197 TGATAAATGTCTTTGGTATTTTTAGTTCCTGACTCATTTTAACGTTCCCTACCATATGGATGTAAATGATTT--CTTAAGACTGATTTCTAGGAATATACATATATTCCCAAGTGTGTGTGTATATATATATATATTCCTAGAAATTGATCTTAAGTAatatatatatatatat-----aatatatac----tgatataatatatata ..:.......x.:.::x.---------..::::x.....x.x.:x.::...xx.x..::.x:....x:...x--....x:.x::.......x:x...:.:....:.x:x::x........................x:x..x.x..------------......:..:......-----..x:.....----.x.:........x... 18M9I45M2D72M12I16M5D9M4D16M 120/176 68.2% 197/94230402 0.0% 32/176 18.2% 89672639 NA +3227 chr4 + 190214555 117374921 117374920 117374996 76 ACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACA chr4 + 94230402 46063290 46063289 46063365 46063290 46063289 46063365 76 ACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...x..x.:...:..:::..:......:..x.::::...x:..:...:.x......:......:xxx....:.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 71311631 NA +3279 chr4 + 190214555 117374926 117374925 117375000 75 TTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATAT------ATATATATATATATATATATATATGTACATATA chr4 + 94230402 85834528 85834527 85834608 85834528 85834527 85834608 81 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..:.x...x:.:x.:.:.x...................xx..------...:....:..x...:..:.x....:...:... 42M6I33M 56/75 74.7% 81/94230402 0.0% 6/75 8.0% 31540398 NA +3066 chr4 + 190214555 117374933 117374932 117375003 71 TATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACATATATGT chr4 + 94230402 39937175 39937174 39937245 39937175 39937174 39937245 71 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGT ....:....:.....::...x......::xxx.x..:...:xxx:...:.:...:....:......x.... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 77437758 NA +3157 chr4 + 190214555 117374933 117374932 117375006 74 TATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACATATATGTTTA chr4 + 94230402 85834533 85834532 85834598 85834533 85834532 85834598 66 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTAT-TA-------ATGTAGGCATACATATGTAAATACATGTTTA ...x...x.:...x...............:...-..-------..:..x::...:.......x...:....... 33M1D2M7D31M 54/66 81.8% 66/94230402 0.0% 8/66 12.1% 31540400 NA +3301 chr4 + 190214555 117374937 117374936 117375046 110 CATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACATATATGTTTAAAAGT---ATACCCGGTTACATAATATAAATACCTAATAGATT chr4 + 94230402 46063298 46063297 46063407 46063298 46063297 46063407 110 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATAC---AAGGTGCAATACTATCTTGCTCAACAGAACTAGCAAAGAAATT ....:......:::.....:..x.:.:..:.x:..:...:.x......:.......xxx......::---..:..---....:xxx..:.x:..:.x..x..x.x..x.:... 67M3D5M3I35M 72/107 67.3% 110/94230402 0.0% 6/107 5.6% 71311639 NA +3248 chr4 + 190214555 117374940 117374939 117374997 58 ATATGTGTGTGTGTGTGTGTGTATATATATATATATA------TATATATATATATATGTACAT chr4 + 94230402 70094147 70094146 70094210 70094147 70094146 70094210 64 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..........x...x...x.....:.....:......------.x:...x.........:.... 37M6I21M 49/58 84.5% 64/94230402 0.0% 6/58 10.3% 47280793 NA +5143 chr4 + 190214555 117383591 117383590 117383770 180 AAAAAAAATGAATTGGTGTCATAAATCT------------AGAGGCAGCCAAAAATACA---------AGCCCACATATAACATCCTACTTATGCAAATAGTGCATCTGCTGCTATATGAGC--AGGCCAAAGAATATTTCCAACTAGACTCATACACCCACAATACTGTGAGAATTAAATCAATCAAAACCACATTCTACTA chr4 + 94230402 57057881 57057880 57058076 57057881 57057880 57058076 196 AAACAAAATCATTTAGTATTGTAGATCTGTACCTATCAAAAAAGGGAGGAAAAAAAATCTGGAAAAATAGCTCGCATGTAGTGCTCTA-------AAATAGTGCATCTGGTGCTTTTTGAGCTAGTGCCAATGAGTATTTCCAAGCAGGCTTAGACACCTGCAGTCAACTGGTGGCAAGATCAATCAAGACCACGTCCTGCCA ...x.....x.x..:..:.::..:....------------.:...x..xx.....x.:x---------...:.:...:..:::::...-------..............x....x.x.....--:x.....x..:.........x:..:..:.x.....::..:.xxxx..:x:::x.:.........:.....:.:..:.:. 28M12I19M9I20M7D27M2I79M 119/173 68.8% 196/94230402 0.0% 30/173 17.3% 60325710 NA +3353 chr4 + 190214555 117463074 117463073 117463113 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 42215025 NA +3567 chr4 + 190214555 117463076 117463075 117463115 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 42215027 NA +3102 chr4 + 190214555 117463078 117463077 117463113 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 104861774 85352781 +3353 chr4 + 190214555 117463078 117463077 117463117 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 42215029 NA +3499 chr4 + 190214555 117463080 117463079 117463186 107 CTCTCTCTCTCTCTCTCTCACACACACACACACACACAAT-TTGTATTTGTACTAACCATGAAATTGCGCTTTAGTTGTTTTCTAATTTTTAAAAATTCTGTTTGCCC chr4 + 94230402 12601304 12601303 12601409 12601304 12601303 12601409 106 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTATTGCTCTGTCCACTATAGGGTTGTTATT--ATTACCCTAAAAACTTCAGAAACCTTGCTTGCTC .........................:..........x.:.-:.:.xx:.x.:::x..:..::::...:xx..--:..::::.xx..x:..:.:...:::..:....:. 40M1I31M2D34M 68/105 64.8% 106/94230402 0.0% 3/105 2.9% 104861776 85352779 +3326 chr4 + 190214555 117463082 117463081 117463137 56 CTCTCTCTCTCTCTCTCACACACACACACACACACAATTTGTATTTGTACTAACCA chr4 + 94230402 12601304 12601303 12601359 12601304 12601303 12601359 56 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTATTGCTCTGTCCA .................x.......:...........xx..:xx...:x..:x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 104861778 85352777 +3217 chr4 + 190214555 117487125 117487124 117487160 36 AGTTTTTTTGTTGCTGTTGTTTTTGTTTTGTTTTTT chr4 + 94230402 42515171 42515170 42515206 42515171 42515170 42515206 36 AGTTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTTT .............:...................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 74971954 NA +3227 chr4 + 190214555 117494295 117494294 117494347 53 CAACAGAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGCTAAAAAGCT chr4 + 94230402 33327147 33327146 33327199 33327147 33327146 33327199 53 CAACAGACTAAAACTGTGCTGGAAAAAAAAAAAAAAAAAAAGGCTGAAATGCT .......x...:...x..::xx...................:...:...x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 84167148 NA +3726 chr4 + 190214555 117506731 117506730 117506802 72 GTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:.......:...::........x.xx.x...x...........:.:..x.xx:.....:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 41473525 NA +4331 chr4 + 190214555 117550316 117550315 117550447 132 TTCCTCAAACATCAAGCATGCACTGTGTTTGCAGTGCCAAGCTGGATTTGACATTTAATTAAAAAAAGTATCTTAACATAGGTCTACA--------CAAAAATCGAGGCTGT---TGCAACAAAATCAATTTTGTCTTATTTA chr4 + 94230402 5849446 5849445 5849587 5849446 5849445 5849587 142 TCCTTCAGACTGTATGCACACACTTTGTTTCTAATGGCAAATTATATTTGACATTTAATTTAAAAAAGCAGGTTACCTTA-ATCTACAACACAGGTAAAGAAGTGAAGCTTTTCATGGAATAAAACCAATTTTTTTTTTTTCA .:.:...:..xx:.x...::....x.....x:.:..x...::.:x...............x.......:.xx...x.x..-:......--------x..:..x:..:...x.---..x..:....:.......x.:..x..:. 80M1D7M8I16M3I28M 93/131 71.0% 142/94230402 0.0% 12/131 9.2% 111700870 78513685 +3037 chr4 + 190214555 117552499 117552498 117552549 51 TCAAAAATGATCTCTTATTATCTCTCCCTCTCTCTCTCTTTCTCTTTCTCT chr4 + 94230402 6554006 6554005 6554056 6554006 6554005 6554056 51 TCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ......xx...:.x.....x......:..........:...:.:...:.:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 110998493 79216062 +3130 chr4 + 190214555 117552536 117552535 117552575 40 CTTTCTCTTTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:....:..............x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 42304487 NA +3496 chr4 + 190214555 117552538 117552537 117552579 42 TTCTCTTTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..:::................................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 42304491 NA +3122 chr4 + 190214555 117552539 117552538 117552577 39 TCTCTTTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::..:................x................ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 42304489 NA +3475 chr4 + 190214555 117552542 117552541 117552581 40 CTTTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................x.................. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 42304493 NA +3216 chr4 + 190214555 117552545 117552544 117552579 35 TCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ........................:.......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 104951240 85263315 +3102 chr4 + 190214555 117552546 117552545 117552581 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 104951242 85263313 +3083 chr4 + 190214555 117614242 117614241 117614305 64 TACCTATACACACATATATGTATATGTATGTGTGTGTGTATATATATATATATATATATGTATA chr4 + 94230402 41749096 41749095 41749159 41749096 41749095 41749159 64 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATA ..:x..x...........x..x...:.xx..:....:....:....:...:..:..:::x.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 75865146 NA +3603 chr4 + 190214555 117614245 117614244 117614327 83 CTATACACACATATATGTATATGTATGTGTGTGTGTATATATATATATATATATATGTATAGTGTGTGTGTATGTGTGTATGT chr4 + 94230402 86234534 86234533 86234616 86234534 86234533 86234616 83 CCACAGACCTATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTGT .:.:.x..x:......x.....:..xx...:x:.::.xx.x...x.:..xx..x.......:.................:... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 31379711 NA +3145 chr4 + 190214555 117643545 117643544 117643618 74 GTTTTTCATTTTTAATTATTATGGGTATACAGTAGGTAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 24523880 24523879 24523953 24523880 24523879 24523953 74 GTTATTTGTATATAAATAACATGAAAATACAACAGGCATATATATATGTTTACTTGTGTGTGTATATATATATA ...x..::.x.x...x..x:...::x.....::...:.x........:.x..:x.:.:.:.:............ 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 93119665 NA +3461 chr4 + 190214555 117675186 117675185 117675274 89 GTGGCACACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGTTTGAACCCGGGAGGCGGAGGTTGCAG----TGA-GCCAAGC chr4 + 94230402 76033201 76033200 76033292 76033201 76033200 76033292 92 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGC ....::....--....:.............::........x:xx.x...x.::........:.:..x:xx:..:..:..----...-....... 10M2D67M4I3M1I7M 65/87 74.7% 92/94230402 0.0% 7/87 8.0% 41641985 NA +3722 chr4 + 190214555 117694144 117694143 117694210 67 ACTTGCTGTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAATAAAACAT--TCTTAAAAAGCATTTACA chr4 + 94230402 44112706 44112705 44112774 44112706 44112705 44112774 69 ATCTGCTGCCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTTCCA .::.....:...................:.:.::..:.......x...:--....::..::.....x.. 49M2I18M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 73581438 NA +3119 chr4 + 190214555 117702026 117702025 117702081 56 CATGTATATGTGTGTGTGTGTATATATATATACACATATATATATACACATATATT chr4 + 94230402 37579519 37579518 37579574 37579519 37579518 37579574 56 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGTT ...:.............:........x..::....::.....xx.:::..x..:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 80122507 NA +3840 chr4 + 190214555 117702028 117702027 117702100 73 TGTATATGTGTGTGTGTGTATATATATATACACATATATATATACACATATATTTATATATATATATATACAT chr4 + 94230402 85834543 85834542 85834615 85834543 85834542 85834615 73 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.:.............:...xx..:..x:....:....:..x.:.:..:.....::.:.:...:.:.... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 31867485 NA +3308 chr4 + 190214555 117702060 117702059 117702113 54 CATATATATATACACATATATTTATATATATATATATACATATATACACACACA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...:.:.:...:....:.:......:x.:....:..:...:...:......... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 94454339 NA +3094 chr4 + 190214555 117702067 117702066 117702139 73 ATATACACATATATTTATATATATATATATACATATATACACACACACACACACACACAGACAGACAGAGAGA chr4 + 94230402 74671060 74671059 74671127 74671060 74671059 74671127 68 ATATACAAAAAT-----TAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAA .......x.x..-----..xx.:........:.....................x.x.x.:.:..x:.:.:.:. 12M5D56M 52/68 76.5% 68/94230402 0.0% 5/68 7.4% 43031007 NA +3052 chr4 + 190214555 117713395 117713394 117713436 42 TGTATATATATATATGTATATATACACACACACAAAAGAATA chr4 + 94230402 74671076 74671075 74671117 74671076 74671075 74671117 42 TGTATATATATATATATACACACACACACACAAAAAAAAATA ...............:..:.:.:.........x....:.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 43042319 NA +3203 chr4 + 190214555 117713397 117713396 117713441 45 TATATATATATATGTATATATACACACACACAAAAGAATATAACT chr4 + 94230402 74671076 74671075 74671120 74671076 74671075 74671120 45 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCT .:...........:....:.:..............:..x...:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 43042321 NA +3244 chr4 + 190214555 117715793 117715792 117715868 76 TGTGTATATATGTGTGTGTGTGTATTTATGTGTGTGTGTATTTGTGTGTGTTTGTATATATGTGTATATATACATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.:.:................x....:x.::.::..x...:x:.::x...x...::::::...:.:..... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 31881252 NA +3094 chr4 + 190214555 117743986 117743985 117744059 74 GTGCACCTGTAATCCCAGCTACTGAAGAGTCTGAAGCAGGAGGATTGCTTGAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........x:.:..x....:x.xx.x.:.x::.....:.....:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 41710782 NA +5804 chr4 + 190214555 117747387 117747386 117747575 189 AGCACTGCCAAGGCTGCTGAGGAG-TCTTTGGATCCTAACTAATTTT---AGAGAGGTTTTATTGATTACACAGAGACAGGGCACATTTTAATCATTTTTACAGCACTGTATTGCCTGAGGTACCAAAATCCATTAAACAAGGATTATAAACTTTATTTTAAACTGGATCCTAAATTGTTTCTTGATGTATAG chr4 + 94230402 57206074 57206073 57206260 57206074 57206073 57206260 187 AGTCCTGTGCAAGCAGTTAAAAAGGTCTTTAGAAAAGAACCAATCTTTCTGTGAAAGTTGTATTGATTACACAGAGGAAAGTC-TATTTTAAACACTTTTATAGCACTGCATTGCCCGAGGAAGTAAAATCTACTATACTCGGATTATGAACCTTTTGTTTA--TGGACTCCCA---TCTTCTTGGTGGACAG ..:x...:xx.:..x.:.:.::..-.....:..xxxx...:...:..---:x::.:...x................:x.:.x.-:.......x..:.....:.......:......:....x.x:......:.:..x..xx.......:...:..x.x..x.--....::.:x.---x:......:..x.:.. 24M1I22M3I33M1D78M2D10M3D16M 127/183 69.4% 187/94230402 0.0% 10/183 5.5% 60541313 NA +3013 chr4 + 190214555 117802188 117802187 117802247 60 TATATATATATATATATATCTTATATATATATAAAATATAAATATATATATATTACATAA chr4 + 94230402 78811855 78811854 78811914 78811855 78811854 78811914 60 TGTATACTCTTGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATAA .:....:x:x.:.........:x...:......x.xx...:..........x...:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 38990333 NA +3185 chr4 + 190214555 117862785 117862784 117862867 83 CATGGTGGCATGCTTCTGTATTCCCAGCTACTTGGAGGACTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...x:x....x.:...........:.:.:.....x.xx.x...x.:.........:.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 41829588 NA +3276 chr4 + 190214555 117867567 117867566 117867649 83 TCTCTCTTTCTCTTTTTCCCCTCTGTTCTGTTTTAGTTACTTTTTTACTTTATTAATGTATAAAAAAATTTAATTTTACTTAA chr4 + 94230402 14829186 14829185 14829267 14829186 14829185 14829267 82 TTTTTTTTTTTTTTTTTCCTTTTTACTCC-TTCCAGTTCCTCTTCTACTTTATTTATTTGTAAAGAAATGAGATCTCACACAA .:.:.:...:.:.......::.:.::..:-..::....x..:..:.........x..x.:....:....xx:..:.:..x:.. 29M1D53M 55/82 67.1% 82/94230402 0.0% 1/82 1.2% 103038381 87176174 +3057 chr4 + 190214555 117918919 117918918 117918967 49 TATATATATATATCATATATATATATCATATATATATATATCATATATA chr4 + 94230402 78811865 78811864 78811913 78811865 78811864 78811913 49 TGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA .:.......x.x.:..:.........x...x...........x...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 39107054 NA +3357 chr4 + 190214555 118030739 118030738 118030809 71 ACATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033196 76033195 76033264 76033196 76033195 76033264 69 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::....--..::.x....:.:...........::........x.xx.x...x.:........::.:.. 9M2D60M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% 41997543 NA +3246 chr4 + 190214555 118030881 118030880 118030954 74 AAAAAAAAAAAAAAAAAGAATATATATATATATATATATATATACATATATGTATTGCACAAGTTCATTTGGAG chr4 + 94230402 1495004 1495003 1495071 1495004 1495003 1495071 68 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA------AGAGGTTACTTTGGAG .:.........x.:...:...........:.:..:...:.....x....:::------.x.:...xx....... 52M6D16M 52/68 76.5% 68/94230402 0.0% 6/68 8.8% 116535877 73678678 +3150 chr4 + 190214555 118040847 118040846 118040903 57 ATATATATATTTATATATTTTTATATATATATATATTTATATATATATATATTTATA chr4 + 94230402 66408428 66408427 66408484 66408428 66408427 66408484 57 ATATATAGACCTATATATTTTTGTATGCTTTTATTTTTATGTATTCACATATTTATA .......x.::...........:...::x.x...x.....:...x:.:......... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 51632419 NA +41940 chr4 + 190214555 118053788 118053787 118054898 1111 ACAAATGAGCTGCAATGGTGACATAAACTCTTGACAGAGATTGGAAAAGTAGCTGGAACACCATCTTTTCTTTTAACTTTTTATGGTGCTTCTGTTGGCATAGTTGGGGAAAGCA------------------------CCTACA--ACATGAGTTTTATCATGAAGCTTCACAGACACTTTCAAAGAACAGTCATTCTGCTTGCCACTTTTTGTATGGTGAGCATTATCATTTCTGCTTACTACCTGTACAGTGGCTACAAACAGGAAAATGAACTCTCTGAGACGGCTTCAGAAGTTGACTGTGGCGACCTCCAACACCTACCATATCAACTAATGGAAGTGAAAGCAATGAAGCTTTTTGATGCCTCAAGGACAGACCCCACAGTCCTAGTATTTGTAGAGAGCCAGTACTCATCTCTTGGTCAAGACATCATTATGATTCTAGAATCAAGTAGATTCCAGTATCACATTGAAATTGCCCCTGGAAAGGGAGATCTCCCAGTGCTTATAGACAAAATGAAAGGCAAATACATTCTCATTATTTATGAGAATATTTTAAAGTATATAAATATGGATTCCTGGAATCGAAGCCTTCTAGATAAATACTGTGTAGAATATGGTGTGGGTGTCATTGGATTCCACAAAACTAGTGAGAAGAGTGTACAGAGCTTTCAGTTAAAAGGTTTCCCTTTTTCCATATATGGAAATCTTGCAGTAAAAGATTGTTGTATTAATCCTCATTCTCCATTGATTCGTGTGACCAAATCTTCCAAGCTTGAAAAAGGTTCTTTACCTGGAACTGACTGGACAGTTTTTCAGATTAATCATTCAGCCTATCAACCAGTAATATTTGCCAAAGTAAAGAC--CCCAGAAAACCTTTCTCCTTCCATCTCTAAAGG-TGCTTTTTATGCCACTATTATACATGACCTGGGGCTTCATGATGGAATTCAAAGGGTTCTTTTTGGCAACAACTTGAACTTTTGGCTGCACAAGCTCATCTTCATAGATGCCATCTCCTTCTTATCAGGGAAGAGGCTGACATTGTCCTTGGACAGGTACATTCTTGTGGATATTGATGATATATTTGTGGGAAAAGAGGGAACAAGAATGAACACCAATGATGTAAAGGTAAGGC chr4 + 94230402 57673198 57673197 57674321 57673198 57673197 57674321 1124 ATAAATGCACTGCAATGGTCACATGAACGTCTCA---------GGAGAGGAATCGGCACCTCTGCGTCTCATTG---TTATTATGGCACTTTAGAAAGAAAAAACCAA-AAAGCAACAAGTCCAAGTCAAGTTGGAAGTCCTACAGAAGATGAATCTAATAGTGAGGCTCCGAAGAAGTTTCAGAACACTGGTCATTCTCCTGGCTGCCTTCTGCATAGCAAGTATTGTCATTTCTGCCTATTACCTGTACACTGGCTACAAGCAGGAGATGACTCTTGCAGAAACCACTGGAGAAGCAGAGTGTGAAGATCTCAAGCTTTTACCATACAGGTCCATGGAGCTGAAAACAGCTAAGCCAATCGATCCATCTAAAACTGATCCCATCATCCTTCTATTCGTGGAAAGCCAGTACTCCCAGCTGGGACAAGACATCATAGCCATCCTTGAATCCAGCAGATTTCAATACCACATGGTCATCGCACCTGCCAAGGGAGATATTCCCCCTCTCACAGACAACGGAAGAGGAAAATACACGATTATTATATATGAGAATATTTTGAAGTATGTATCCATGGACTCGTGGAACAGAGAGCTTCTGGAAAAATACTGCGTGGAATACAGTGTTAGCATAATTGGTTTTCATAAAGCCAATGAGAACAGCTCCCCAAGTACAAAACTGAAAGGCTTGCCATTACAACTTTACAATAACATTGCCCTCAAAGACTGTGTTGTAAACCATCAGTCTCCGCTTCTGCGCATTACCAAAGCACCAAGGACTGAGAAAGGCCCACTGCCTGGTGAAGACTGGACAGTTTTCCAGTTCAACCATTCCACCTACCAACCTGTGCTTTTAACTGAACTGCAGACTTCCAGGCCAACC---CCCATGGCATTGCCAAAGGCTGCTCTGTATGCAACTGTAATCCAGGACTTGGGGCTTCACGATGGGATTCAGAGAGTTCTTTTTGGAAACAACCTGACCTTCTGGTTGCACAAACTGATCTTTATTGATGCCATCTCTTTTCTGTCAGGGAAGAAGCTCACGCTGTCCTTGGATAGATACATTCTGGTTGACATTGATGACATCTTTGTTGGGAAAGAAGGAACAAGGATGAATGTCAACGATGTGAAGGTAAGGC .:.....x:..........x....:...x::.x.---------.:.:..x.:::..x..x:.xx.x.:..x..x---..x......::...:x.xx:.x.x.:x:x::-......------------------------......--.x....:.:.x..x:...:...:.:x...x::..:x:..x.x::........x..x..::.:..:..:..:.::..:...:..........:..:..........x.........:.....:.xx:xx..:x.x..:..x:..xx.....:x..x....:x..:...x.:.x::.......:x::::x.....:x.....:..::x....:xx.:...x.x..x.::..x..:....:x:....xx....:..:..:...........x:xx..x..x...........x::x..:..x.....x..:.....:..:..:.....x.xx..:..x....xx.........x.:..xx:x..:.:......x:x:.:...x.......:xx.:.....x..............:......:..xx:.....:..x.....:x..::x.....:..x........:..:.....::....x:.::.x.....x..:..:...:.:.:......x..:x:x.x:..:x:xx.::.:.....:..x..x..x:xxx.x..:::x..:x....xx.x.....:...xx.:.x..:.x...x.....::.xx.x..::.x......x.x:.x.:.x:...:.....::.x:.:.....x:xx..............:...x.:..:.....x:....:.....x..:x.x..x:.::..x.:x....--..x:.xx....---.:.x.xx...:x.:.....-....:.x.....x...:.x..x..x...:..........:.....:.....:..:...........x......:...x...:...:.......:..x.....:..x...........:..::.:..........:...x..::..........:..:........x..x..:........:..x.....x..:.....:........:.....:::...:.....:.......... 34M9D31M3D31M1D6M24I6M2I721M2I11M3D19M1I236M 750/1095 68.5% 1124/94230402 0.0% 45/1095 4.1% 60380590 NA +14162 chr4 + 190214555 118053926 118053925 118054896 971 AAGCTTCACAGACACTTTCAAAGAACAGTCATTCTGCTTGCCACTTTTTGTATGGTGAGCATTATCATTTCTGCTTACTACCTGTACAGTGGCTACAAACAGGAAAATGAACTCTCTGAGACGGCTTCAGAAGTTGACTGTGGCGACCTCCAACACCTACCATATCAACTAATGGAAGTGAAAGCAATGAAGCTTTTTGATGCCTCAAGGACAGACCCCACAGTCCTAGTATTTGTAGAGAGCCAGTACTCATCTCTTGGTCAAGACATCATTATGATTCTAGAATCAAGTAGATTCCAGTATCACATTGAAATTGCCCCTGGAAAGGGAGATCTCCCAGTGCTTATAGACAAAATGAAAGGCAAATACATTCTCATTATTTATGAGAATATTTTAAAGTATATAAATATGGATTCCTGGAATCGAAGCCTTCTAGATAAATACTGTGTAGAATATGGTGTGGGTGTCATTGGATTCCACAAAACTAGTGAGAAGAGTGTACAGAGCTTTCAGTTAAAAGGTTTCCCTT-TTTCCATATA----TGGAAATCTTGCAGTAAAAGATTGTTGTATTAATCCTCATTCTCCATTGATTCGTGTGACCAAATCTTCCAAGCTTGAAAAAGGTT--CTTTACCTGGA---ACTGACTGGACAGTTTTTCAGATTAATCATTCAGCCTATCAACCAGTAATATTTGCCAAAGTAA------------AGACCCCAGAAAACCTTTCTCCTTCCATCTCTAAAGGTGCTTTTTATGCCACTATTATACATGACCTGGGGCTTCATGATGGAATTCAAAGGGTTCTTTTTGGCAACAACTTGAACTTTTGGCTGCACAAGCTCATCTTCATAGATGCCATCTCCTTCTTATCAGGGAAGAGGCTGACATTGTCCTTGGACAGGTACATTCTTGTGGATATTGATGATATATTTGTGGGAAAAGAGGGAACAAGAATGAACACCAATGATGTAAAGGTAAG chr4 + 94230402 57243074 57243073 57243904 57243074 57243073 57243904 831 AGGTTTTGCAGATGTTTTCAAAGC-CTGTTGGTCCCCTGACTTTATCACATAAAGTAAGTATTG--ATGTTTGCTTGCTGTTTGTTCAGTGGTCATAAGGAAAAAGTAGAAGTTTCTGAGGCAGTCCTTAAGATGGGATATGTAGGTGTCAAGCTTTCACCTTACC----------------------------------TGCTT----------------------------------GAGCCAGTATTCAT--------------ATAATTACAATCCCAGAGTAAAATA-ATTTGAATAAAACCTGGAGACTGTGGTGGCTAAAGCTGATGTTCCA--------AGATAAAGGAGTAGAGAGATATGAATTCATTGTTTATGAACATGTTTTAAAGTACGTAAATTCAAGTCCACAGCATAGAAGCCTTTTGGACAGGTACTGTTGGAATTGTAGTATTGATGAGACTGATTTTCTTAAGGCTGATGAAAATGGTTTGCTCAACTGTCAGCTAAAAGGCTTCCATTGCTTCTGTATAACAGCTTAAGTCTTAC------AAATTGTTG---TTATCCCCATTCTCCTTTAA-----ATAACCAATGTTTCTGAAATTGCAGTGGGTTTCTTTTTACTGGCTATAAAGACTGGACAATATTCCAATTCAATCATTTTACATATGGATAAGTTCTGTTAACTTGAATAAAATAATTGAGACAGCTCCCACAAAAAAATTCATC----------AACGTTATTTTCTGTACTAC----------------------------------------GGTTTGCTTGTCAGCAACTGAACCTTTTTGCTTTAAAAGTTGATCTTTGTAGATTTTATCTCCTGTCTGCCACAGAAAAGCCTCCTCTGGTTCTCTGATAGGTACATTCTGGCTGATGCTGA--ATCTCTCTATTGGAACAGAGGAA--AAGAATGAATGCCAGGGATGCTGAGGCAAG .:.:..::....:::........x-.x..::x..:x..x:.:x:x.:x::..x:..:..:...:--..x.:.....:..:::...x......::.:..:x.::..:xx...x.:......:.:.::::x:.::.x.:x.:..xx.::x..x.:.x:::...x..:.----------------------------------...:.----------------------------------.........:....--------------..x....::..:.:...:.x..:..-...:x.:..xx..x.x..:.:..:xx:x.xx..:.xx...x.:...--------...:...:x::x..:x.:...::xx:.....:.......:x..:..........::.....x::::.:.x::.x..x........:.:..:.::......xx::.x.:.:..:.x.:..xx.:..:x..:.x:..::..::...:..x:..x.:.xx.:..x....:.......:....x..-:...::....----:xx..:....:.------.:.......---.x....:........x..:.-----:.:.....xx:...::.:x...x.:x:....--:...xx....x---.xx.........:.x..:..:x.:.......:x:.x...x:.:x...xx.:..x:.:x:.:...------------..x:....x....xxx...x:.----------..x.x.::...:.:.:.:..----------------------------------------.x.:.x:...x..:.....x:.x.....x...x:.x...:.x.....::.....x::.......x::.::..x:...:..x..xx:x.x..:..:x..:...........x.:x...::...--..x.x.:.:.x....x.....:.--.........::...:x....:x:...:... 24M1D39M2D100M34D5M34D14M14D25M1D46M8D182M1I10M4I12M6D9M3D20M5D31M2I11M3I64M12I22M10D20M40D122M2D23M2D30M 504/809 62.3% 831/94230402 0.0% 184/809 22.7% 60810852 NA +3054 chr4 + 190214555 118058591 118058590 118058657 67 AAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCACGCATGCATG chr4 + 94230402 79265515 79265514 79265581 79265515 79265514 79265581 67 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTG ..x..............::........xx...:.:.:::.::::.:.:..:.:....x:...::x.. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 38793076 NA +3264 chr4 + 190214555 118058599 118058598 118058656 58 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCACGCATGCAT chr4 + 94230402 79265519 79265518 79265576 79265519 79265518 79265576 58 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACAT .............::........xx...:.:.:::.:.:..:.:..:......x:... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 38793080 NA +3025 chr4 + 190214555 118058603 118058602 118058666 64 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCACGCATGCATGCAAACGTGT chr4 + 94230402 79265519 79265518 79265582 79265519 79265518 79265582 64 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .............::........xx...:.:.:.:::.:..:.::.:..:...x:..x.:x... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 38793084 NA +3768 chr4 + 190214555 118066127 118066126 118066302 176 TATTATATAATATATTTTATATATTATATATATTATATATTATATTTTATATATTATATATCTTATAT---ATTATATTTTATATATTATACATAATATATTATATATATTATATATTATATATATTATATAT--TATATATATTATATAT---ATTATATATTATATATATTATATATATTAT chr4 + 94230402 26320174 26320173 26320343 26320174 26320173 26320343 170 TGTTCTGTAATGTAGTGTGT-CATTA-----ATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATG--------TATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAAT .:..x.:....:..x.x.:.-:....-----..x.x.....x.x..x...:....xx.xxx:.x....---..:.xx..xx..x...:x:....:--------......:..:............:......:--.....x......:...---..x:......x.xx:....:.....:.x.. 20M1D5M5D37M3I24M8D30M2I16M3I30M 116/162 71.6% 170/94230402 0.0% 22/162 13.6% 91745953 NA +4048 chr4 + 190214555 118066177 118066176 118066344 168 ATATTATATATCTTATATATTATATTTTATATATTATACATAATATATTATATATATTATATA---TTATATATATTATATATTATATATATTATATATATTATATATTATATATATTATATATATTATGTATTATATATATTATATATATTATGTATTATATATATTATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCT----TATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACAT-GTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----GTATATTTTTAGTATTGTATATGTAATA ..:.x:.:.:..x.xx...xx.......x.----....::..x.xx.x.:.xx.....xx..x---...x..x...:x:.:..-:......:..:....xx......:......:.x.....x..........:xx...----:.....x..xx.....:.....:.x... 30M4D29M3I17M1D55M4D28M 111/159 69.8% 162/94230402 0.0% 12/159 7.5% 91745994 NA +3294 chr4 + 190214555 118066216 118066215 118066358 143 ATAATATATTATATATATT-ATATATTATATATATTAT-ATATTATATATATTATATATATTATATATTATATATATTATATATATTATGTATTATATATATTATATATATTATGTATTATATATATTATATATCATATATCATA chr4 + 94230402 26320204 26320203 26320344 26320204 26320203 26320344 141 ATATTTTCTTATATGTATTCAAATGTTG-ATATTTAATCAGCTTAAATTTATCTCACATGT---ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ...x.x.x......:....-.x..:..:-....x.x..-.xx...x..x...:x:.:..:.---....xx..:............:...:..:x......x.xx...:...:xx:..x.....x.x.x:...xx:....:.x... 19M1I8M1D9M1I22M3D81M 96/139 69.1% 141/94230402 0.0% 6/139 4.3% 91746012 NA +3225 chr4 + 190214555 118066250 118066249 118066327 78 TATATATTATATATATTATATATATTATATAT--TATATATATTATATAT---ATTATGTATTATATATATTATATATATTAT chr4 + 94230402 26320261 26320260 26320343 26320261 26320260 26320343 83 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAAT .:.....xx..:............:......:--.....x......:...---..x:.:....x.xx:....:.....:.x.. 32M2I16M3I30M 60/78 76.9% 83/94230402 0.0% 5/78 6.4% 91745989 NA +3583 chr4 + 190214555 118066291 118066290 118066375 85 TATATATATTATGTATTATATATATTATATATATTATGTATTATATATATTATATATCATATATCATATGTTATATATTATATAT chr4 + 94230402 26320261 26320260 26320338 26320261 26320260 26320338 78 TGTATATACTACATATTATATATACTATATA-------CAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATAT .:......:..::...........:......-------:.x.....x......:....xx...x:....x..xx:....:..... 31M7D47M 60/78 76.9% 78/94230402 0.0% 7/78 9.0% 91746030 NA +3004 chr4 + 190214555 118067907 118067906 118067975 69 AACTTAAAATAAGTAAATAAATAAATAAAAAGAAAAAAGAAAAAAAAGAAAAGAAATTGACACAATTTC chr4 + 94230402 33989486 33989485 33989554 33989486 33989485 33989554 69 AAATTACATTTAAGAAATAATTTAATGCAAAGAAAAAAAAAAAGAAATACAAGAAATTGCAACAGTATC ..x...x.x.x.:x......x.x...:x..........:....:...x.x.........xx...:.x.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 84078421 NA +7070 chr4 + 190214555 118105005 118105004 118105115 111 TTATGTATTTCAGGCCCTGCTTGATACTCAGAATCTTTTGCGTGCACAAATCACAAATTTTACATTCAACCTGGGATTTTCAGGGAAATTTTACCATACAGGTAAGAAAAA chr4 + 94230402 57703146 57703145 57703256 57703146 57703145 57703256 111 TTATTTATTTCAGGCTTTACTAGAGACTCAAAATTTACTGCGCACTCAGGTTGCAAATTTTACCTTCAACCTTGGATTTTCAGGAAAATTTTACCATACAGGTAAGAAGGA ....x..........::.:..x..x.....:...:.x:....::.x..::.::..........x........x...........:.......................::. 111M 89/111 80.2% 111/94230402 0.0% 0/111 0.0% 60401859 NA +12400 chr4 + 190214555 118114804 118114803 118114968 165 AGGAACTGAAGAGGAAGATGAAGGAGATGACTGTCTGTTGGGGTCTGTGGATGAGTTCTGGTGGTTTCCTCACATGTGGAGCCATATGCAGCCCCACCTCTTCCACAATGAGTCATCTTTGGTGGAGCAGATGATTCTCAACAAAAAATTTGCCTTAGTAAGTAA chr4 + 94230402 57708252 57708251 57708416 57708252 57708251 57708416 165 AGGCACTGAAGAGGAAGATGAAGGTGATGACCTGCTGTTGAGATCTGTGGATGAGTTTTGGTGGTTTCCCCATATGTGGAGTCACATGCAGCCTCATCTCTTCCACAATGAGTCGTCACTGGTAGAGCAGATGATCCTCAACAAAGAATTTGCACTAGTAAGTAA ...x....................x......:xx......:.:..............:...........:..:........:..:........:..:.................:..x:....:...........:.........:.......x:.......... 165M 143/165 86.7% 165/94230402 0.0% 0/165 0.0% 60406552 NA +11992 chr4 + 190214555 118138039 118138038 118138246 208 TTTGCTTGGTCTTAGGAGCACGGCATTCCAACGGACATGGGCTACGCTGTGGCCCCTCACCATTCGGGCGTCTACCCTGTACATGTTCAGCTTTATGAGGCCTGGAAGAAGGTCTGGAATATTAAAATCACCAGCACTGAAGAATATCCACATCTGAAGCCAGCTAGATACCGGAGGGGTTTTATCCACAAAAACATCATGGTGAGCT chr4 + 94230402 57716599 57716598 57716806 57716599 57716598 57716806 208 TCTGCTGTGTCGCAGGAGCATGGCATACCGACTGACATGGGTTATGCAGTGGCTCCACACCACTCTGGGGTCTACCCGGTCCACATCCAGCTGTATGAGGCCTGGAAGAAGGTCTGGCATATCCGAGTGACCAGCACAGAAGAATACCCACACCTGAAGCCTGCACGGTACAGACGGGGCTTCATCCACAATGGCATCATGGTACACT .:....xx...x:.......:.....x..:..x........:..:..x.....:..x.....:..x..x........x..x..::.:.....x........................x....:x:.:.x........x........:.....:........x..xx.:...x.:x....:..:........x::.........:x:.. 208M 161/208 77.4% 208/94230402 0.0% 0/208 0.0% 60421440 NA +10178 chr4 + 190214555 118143541 118143540 118143700 160 TCATTTTTCCTTCAGGTTCTCCCAAGACAAACCTGTGGGCTTTTCACTCACACCATTTTCTACAAAGAATATCCAGGGGGTCCTAAAGAGCTGGATAAGAGTATCCAAGGAGGAGAACTTTTCTTCACTGTCGTCCTCAACCCTGTAAGTACTTTATTCT chr4 + 94230402 57718767 57718766 57718926 57718767 57718766 57718926 160 TCATTTTGTTCTCAGGTGCTCCCTCGGCAGACCTGTGGCCTTTTCACTCATACTATTTTTTACAAGGAATATCCTGGGGGTCCTCAGGAGCTGGACAAAAGTATCCGAGGAGGTGAACTTTTCCTCACCATTCTCCTGAATCCTGTAGGTACCTTCTTTT .......x:::......x.....xx.:..:........x...........:..:.....:.....:........x.........x.:........:..:.......:......x.........:....::.:x....x..:......:....:..x..:. 160M 128/160 80.0% 160/94230402 0.0% 0/160 0.0% 60424774 NA +3585 chr4 + 190214555 118153684 118153683 118153766 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 42120487 NA +3233 chr4 + 190214555 118170593 118170592 118170671 79 GTGGTGCACACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAATCCGGGTGGTGGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--..:...:...........::........x.xx:x...x.:......:..:.:x.x.xx:.::..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 42137392 NA +12875 chr4 + 190214555 118224466 118224465 118224677 212 ACTGAA--GTTCATTTGCTTTTTTCAGATCAGCATTTTCATGACCCATTTGTCCAACTATGGGAATGACCGACTGGGATTATATACATTTGTTAATCTGGCCAACTTTGTGAAGAGCTGGACCAACCTGCGACTTCAGACTCTGCCTCCAGTACAACTGGCCCACAAGTATTTTGAGCTGTTTCCTGATCAGAAAGACCCTCTCTGGCAGGTAA chr4 + 94230402 57743065 57743064 57743277 57743065 57743064 57743277 213 ACTGAAAGGTTTCTCTGCTCTCC-CAGATCAGCATCTTCATGACCCATTTGTCTAATTATGGGAATGACCGCCTGGGGCTGTACACCTTCTCAAACCTGGCCAGCTTTGTGAAGAGCTCGACCAACCTGCAACTGCAGACACTGCCACCCATCCAGCTGGCACACAAGTACTTTGAACTCTTCCCTGAGCAGACGGACCCCCTTTGGCAGGTAA ......--...:x.:....:.::-...........:.................:..:..............x.....::.:..:..x..:x:x..:.......:..............x...........:...x.....x.....x..x:.x..:.....x........:.....:..x..:.....x....x:.....:..:.......... 6M2I15M1D190M 171/211 81.0% 213/94230402 0.0% 3/211 1.4% 60481401 NA +7587 chr4 + 190214555 118226865 118226864 118226989 125 CTATGTTCTTCTCCCATTTAGAATCCTTGCGATGACAAACGCCACAGAGACATTTGGTCTAAAGAAAAAACTTGTGATCGCTTACCAAAATTCTTGGTAATAGGACCCCAGAAAACTGGTGAGAA chr4 + 94230402 57745569 57745568 57745691 57745569 57745568 57745691 123 CTCTGTTTTTCTTC--TTCAGAATCCATGTGATGACAAACGACACAGAGATATTTGGCCCAGAGACAAAACTTGTGACCATCTACCCAAATTTCTTGTTATAGGACCCCAGAAAACAGGTAAGAA ..x....:....:.--..:.......x..:...........x........:......:.:.:...x...........:.:::....x.....::.x..x.................x...:.... 14M2D109M 100/123 81.3% 123/94230402 0.0% 2/123 1.6% 60481296 NA +3334 chr4 + 190214555 118232615 118232614 118232733 119 GCAATATAGTAAGATGCTGAAAAAAAAAGAAAGAAAGAGAGAGAAAGAAGGAAAGAAAGAAAAGAAAAGGAAAGAAACAAAGAAAG--AAAGAAAAGATA-AAAAGAAAACTGAGACAAACA chr4 + 94230402 35373042 35373041 35373163 35373042 35373041 35373163 122 GCAATAAAATGAGATTCTGATGGGCAGAGGAAGAGCATGAAAGAAAGTAGAGGAGAGAGCAATGAGAAGGAAAAGAGTTCAGGTAGTTAGAGGTAAGCTCTAAAATAAAAATGGAACCAGCA ......x.:.:....x....x:::x.:..:....:x:x..:......x..:::...:..x..x..:.......::.::xx..:x..--.:..:x...x.x-....x....x..::..x.:.. 86M2I12M1I21M 76/119 63.9% 122/94230402 0.0% 3/119 2.5% 82859573 NA +7461 chr4 + 190214555 118233001 118233000 118233140 140 TGTCTTTCTAGGTACCACTGCTTTGTATTTGTTCCTGGTTATGCATCCTTCCATCCTTAGTAACTCCCCCAGCCCAAAAACCTTTGAGGAGGTACAGTTCTTTAATAGAAATAACTACCACAGGGGGATTGATTGGTAAG chr4 + 94230402 57747406 57747405 57747545 57747406 57747405 57747545 140 TGTTGTTGTAGGAACAACAGCACTTTATTTATTTCTTCTGATGCATCCTTCTATTATCAGTAATATCCCTAGCCCAAAAACATTCGAAGAAGTTCAGTTCTTCAATGGGAACAACTATCACAAAGGAATTGACTGGTAAG ...:x..x....x..x..x..x:.x.....:..:..xx.x...........:..:x.:.....:x:...:...........x..:..:..:..x........:...:.:..:.....:....::..:.....:....... 140M 104/140 74.3% 140/94230402 0.0% 0/140 0.0% 60485595 NA +11759 chr4 + 190214555 118237015 118237014 118237233 219 TCTTATTTTGAGAAAAATATTCCTTTTCTAGGTATATGGATTTCTTCCCAGTCCCATCTAATGTCACTACCGACTTTTTGTTTGAGAAGAGTGCCAATTACTTCCACTCAGAGGAAGCCCCTAAAAGAGCTGCTTCTCTGGTTCCCAAAGCCAAGATTATCACCATTCTCATTGACCCTTCAGACCGAGCATACTCCTGGTACCAGGTAAGGAAAATGC chr4 + 94230402 57749422 57749421 57749640 57749422 57749421 57749640 219 TTTAATTCTAATTAATTTCTTTACCTCCCAGGTACATGGATTTCTTCCCCACTCCTTCCAACACCACCACTGACCTTCTCTTTGAGAAAAGTGCCAACTATTTTCATTCTGAGGAAGCTCCTAAACGAGCAGCTTCCCTCATCCCCAAGGCCAAGATCATCACCATCCTCATCGACCCATCTGACCGTGCCTATTCTTGGTATCAGGTATGGACCATGC .:.x...:.:.xx..xx.x..:x::.:.:.....:..............x:::..x..:..:::...:..:...:..:.x........:........:..:..:..:..x........:......x....x.....:..x:.:.....:........:........:.....:.....x..x.....x..x..:..:.....:......x...xx.... 219M 162/219 74.0% 219/94230402 0.0% 0/219 0.0% 60487593 NA +7995 chr4 + 190214555 118237020 118237019 118237223 204 TTTTGAGAAAAATATTCCTTTTCTAG---------GTATATGGATTTCTTCCCAGTCCCATCTAATGTCACTACCGACTTTTTGTTT---GAGAAGAGTGCCAATTACTTCCACTCAGAGGAAGCCCCTAAAAGAGCTGCTTCTCTGGTTCCCAAAGCCAAGATTATCACCATTCTCATTGACCCTTCAGACCGAGCATACTCCTGGTACCAGGTA chr4 + 94230402 57270000 57269999 57270213 57270000 57269999 57270213 214 TTTTGATCAAAAT-TTCTGTCTCTAACTTGATCACGTACATGGAATTTTTCCCCATTCTGATCAATGCAACTAGTTTTTCTTTACTCATAGAGAAAAGTGCCAATTATTTCTATTCTGAGAAAGCTCCTGCATGAGCCAGTTTTCTGGCCCCCAAGGCCAAGATTATCACAGTCCTCACTGATGCATCAGATC-ATTGTTCTCCTGGTATCAGGCA ......xx.....-...:x.:....:---------...:.....x..:.....x:.:.::x::....:x....x:xx:.:...::.:---.....:...........:...:.:..x...:....:...:x.x....::x..:.....::.....:..............x:.:....:...:x.x.....:.-.x::.x.........:....:. 13M1D12M9I52M3I103M1D22M 143/202 70.8% 214/94230402 0.0% 14/202 6.9% 60967020 NA +3377 chr4 + 190214555 118238014 118238013 118238209 196 AGCTACTTGGAAGGCTAAAGTGGGAGGATTGCCTGAGCCTGGGAGGTTGGGGCTGCAGTGAGCTGTGATTGCAGCATGTACTGTGCAGAGGGAGACTCTGTCAAAAGAAGAG--AGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 49044644 49044643 49044820 49044644 49044643 49044820 177 AATTACCTAAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACA---AGTAGTGA--GAAGCA---------CTAAGTGAGA-------AAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .::...:.::...::.....x.::.:..x.:xxx..x:xx...x....:.::xx:..---..:x....--.x....---------.x:..x....-------..::......--.:...:...:::.::.x..:...x................x...:x.:.:..xx:.::xx..:....::....:x:..x..x.. 57M3D8M2D6M9D10M7D10M2I84M 110/175 62.9% 177/94230402 0.0% 23/175 13.1% 69193370 NA +3065 chr4 + 190214555 118238114 118238113 118238178 65 TCAAAAGA--AGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 74345149 74345148 74345215 74345149 74345148 74345215 67 TCAAAATATTGGGAAGAGAACGGGAGAAAGGGAAAAAAAAAAGAAAAGAGAATTAAAACGAAAGAAA ......x.--:.::.....:x.:....:..:..:....:..........:.:xx.:..x........ 8M2I57M 48/65 73.8% 67/94230402 0.0% 2/65 3.1% 43892965 NA +3354 chr4 + 190214555 118238116 118238115 118238225 110 AAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--------AAGAAAGAAAGAAAGAA chr4 + 94230402 51148383 51148382 51148502 51148383 51148382 51148502 120 AGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .:......xx.x...............:.....x::...xxx....--::..x.:..x.x:..::.x:...:.:...:..:....:::..::.x.--------...x.x...:...:.:. 46M2I47M8I17M 73/110 66.4% 120/94230402 0.0% 10/110 9.1% 67089733 NA +3106 chr4 + 190214555 118238158 118238157 118238239 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x..:::..:.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 77125980 NA +3166 chr4 + 190214555 118238161 118238160 118238253 93 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAAAAAGAAAGAAAAT chr4 + 94230402 52659762 52659761 52659854 52659762 52659761 52659854 93 AAGTTAGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAAATAT ...xx............xxx.:....:::...x:::xx.x:x:..xx...............:.....::x.....:.x..x.:.x.:..x.. 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 65578399 NA +3153 chr4 + 190214555 118238180 118238179 118238236 57 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAG chr4 + 94230402 83419839 83419838 83419895 83419839 83419838 83419895 57 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAAG ........x...:.:x..x::....:x....x...x..:.............:.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 34818341 NA +9016 chr4 + 190214555 118242025 118242024 118242207 183 TATTTGATAATTTAGTTGCTAATTATTGATGGGCAACAACTAAGAACTGATCCTGCTACAGTGATGGATGAAGTACAGAAGTTTCTAGGAGTCTTGCCTCATTATAATTACTCAGAAGCTTTAACGTAAGTTTATATTCTAATTAGTTTATTG-----ACATTTCAGCAGAGAATTGATTTCAAAGAA chr4 + 94230402 57753887 57753886 57754074 57753887 57753886 57754074 188 TATTTATCCCTATAGTTGCTAATTATTGATGGACAGCAGCTAAGAAGTGACCCAGCTACTGTGATGGATGAAGTGCAGAAGTTCCTTGGAGTCTCTCCTCACTATAATTACTCTGAAGCTCTAACGTGAGTCTTTTTTATCATCTGTCCTATGGAATCACAGATTAGTACATCATTAGTTGCAAACAA .....:x:xx.x....................:..:..:.......x...:..x.....x..............:........:..x.......:x.....:...........x......:......:...:.x.x..x.x..:x..::xx..-----...xx.:..:.x.xx...::..x....x.. 153M5I30M 139/183 76.0% 188/94230402 0.0% 5/183 2.7% 60488138 NA +3613 chr4 + 190214555 118246466 118246465 118246548 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::........x.xx.x...x..........::::..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 42213269 NA +3185 chr4 + 190214555 118247412 118247411 118247494 83 CGTGGTGGCGCAGGCTTTTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...--.x.x..:.:.........:x.:........x.xx.x...x::...........:..x.xx:..:..:.. 12M2D69M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 42214215 NA +7340 chr4 + 190214555 118253482 118253481 118253621 140 ATTCTTTTTTTTTTTAGGTTTGATTCTCATAAAGGTTTCTGGTGTCAGTTACTGGAAGAAGGTAAAACAAAATGCCTTGGAAAGAGCAAAGGAAGAAAATACCCTCCAATGGATTCTGATGTAAGCATAGACCTTAAAAA chr4 + 94230402 57757992 57757991 57758127 57757992 57757991 57758127 136 ATTATAATCCTTTATAGGTTTGACCCTCAGAAGGGCTTTTGGTGCCAGTTACTGGAAGGAGGGAAAACAAAGTGCCTGGGAAAAAGCAAAGGTCGAAAATACCCACCAATGGACCAAGAGGTAA----AGGCTTTACAGA ...x.xx.::...x.........::....x..:..:..:.....:.............:...x........:.....x.....:........xx..........x........::xx..x....----..:.:...x.:. 124M4D12M 106/136 77.9% 136/94230402 0.0% 4/136 2.9% 60495490 NA +5055 chr4 + 190214555 118255595 118255594 118255719 125 CAGGACATTTCTGTCAAGCTACTATCGAGATCACAACGTGGAACTCTCAAAGCTGCTGCACAAACTGGGTCAGCCTCTGCCATCCTGGCTGAGACAGGAGCTGCAGAAAGTAAGATAGCACTGAG chr4 + 94230402 57275722 57275721 57275832 57275722 57275721 57275832 111 CAGATTATCTTTGTCAAGCTATGAC--------------AGAACTATCCAAGGTTCAGCACAGGTGGGAGCAGCCTCCCCCCTCCTGGCTGAGGCAGGAGCTGCAAAAGGTGAGATGGCACCAAG ...:x:..:.:..........:x.:--------------:.....x..x...x.x.x.....:::x..:x.......:x..x...........:...........:..:..:....:....::.. 25M14D86M 81/111 73.0% 111/94230402 0.0% 14/111 12.6% 60979873 NA +8857 chr4 + 190214555 118255602 118255601 118255715 114 TTTCTGTCAAGCTACTATCGAGATCACAACGTGGAACTCTCAAAGCTGCTGCACAAACTGGGTCAGCCTCTGCCATCCTGGCTGAGACAGGAGCTGCAGAAAGTAAGATAGCAC chr4 + 94230402 57758423 57758422 57758536 57758423 57758422 57758536 114 TTCCTGTCGAGCTACTACCGAGAGCACAACGTGGAGCTGTCTAAGCTGCTGCACAGACTGGGTCAGCCCCTGCCCTCCTGGCTGAGACAGGAGCTGCAGAAGGTCAGGTAGCAC ..:.....:........:.....x...........:..x..x.............:............:.....x..........................:..x..:...... 114M 101/114 88.6% 114/94230402 0.0% 0/114 0.0% 60497179 NA +3346 chr4 + 190214555 118265129 118265128 118265197 69 GTGGTGACACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGACTCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:.........::::........x.xx.x..xx.............:.. 6M5D58M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 42231928 NA +3856 chr4 + 190214555 118304121 118304120 118304219 99 CATGTACGTGTGTGTGTGTATCTGTATATATGCATACATGTGTATATGTATGTGTGTATGTGTGCATATATGTGTGTGTATATATACATATACACACAT chr4 + 94230402 5214223 5214222 5214321 5214223 5214222 5214321 99 CACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.:.:x:.......:.:.xx...x.::.::..:.:x.::..:....:..x..::.:.......::.x.:........::..::.x..:.:::..... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 113089898 77124657 +3007 chr4 + 190214555 118304171 118304170 118304211 41 TGTGTGTATGTGTGCATATATGTGTGTGTATATATACATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x...:.:.......:..............x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 69345496 NA +3057 chr4 + 190214555 118305104 118305103 118305157 54 TATATATATATATATATACACACACACACACACATATATATATATACTGAAAAT chr4 + 94230402 74671076 74671075 74671129 74671076 74671075 74671129 54 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAAT .:..............................x.x.x.x...xx..xx:..... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 43634028 NA +3270 chr4 + 190214555 118327043 118327042 118327123 81 CACATTCAAAGCCGTCTTGGGCTGCATATGGCCTGCGGGCTGTGGGTTGGACAAGCTTGGTTTATACAATGTTTTTTAAAA chr4 + 94230402 83270673 83270672 83270753 83270673 83270672 83270753 81 CGCACTGTGAGCTGTGCCAGGTTGCATGCAGCCTGTGGACTGTGAGTTAGACATGCTTGGTCTGGTGTATCTGTTTTAGAA .:..:.xx:...:..x:::..:.....:::.....:..:.....:...:....x.......:.:xxxx..x.x.....:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 35056370 NA +3698 chr4 + 190214555 118354327 118354326 118354392 66 TGGCGCACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGCCAGGAAAATCGCTTGAACCTGGGAGC chr4 + 94230402 76033202 76033201 76033265 76033202 76033201 76033265 64 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ...:.....--....:.............::..........xx.x:..x.:........::.:... 9M2D55M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 42321125 NA +3255 chr4 + 190214555 118357915 118357914 118357993 79 AGGAATCCTTCCAGAACTTTCTGA---CAAATGGACTTCTATCTATTTCTTTCTTTCTTTTTTCTTTCTTTTTTTTTCTTTC chr4 + 94230402 53747131 53747130 53747208 53747131 53747130 53747208 78 AGGAAATCTT----GGCTTTTTGATGCCAAATAGGACCCAATCTATTTCTCTCTTTTTTTTTTTTTTTTTTCCCATTCTTTC .....x:...----::....:...---.....:.:x::.x..........:.....:......:...:...:::x....... 10M4D10M3I55M 56/75 74.7% 78/94230402 0.0% 7/75 9.3% 64610784 NA +3145 chr4 + 190214555 118364807 118364806 118364883 77 TTACTCTGAGGGGGTTGAGAATATTTACCTTTGCTTGCTTTTTATTTGCAAGGATTAAAGCCAGATTACCTTCTCTT chr4 + 94230402 78231389 78231388 78231457 78231389 78231388 78231457 69 TTCTTCTGAGATAATTGAGAATTTTTACTGCTGCTTGCTTTTTTTTTGTAAGGG--------AAATCACCTTTTTCT ..x:......:x::........x.....:x:............x....:....:--------.:..:.....:.::. 54M8D15M 51/69 73.9% 69/94230402 0.0% 8/69 11.6% 40133418 NA +3113 chr4 + 190214555 118366978 118366977 118367025 48 ACTTTTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA chr4 + 94230402 88547314 88547313 88547361 88547314 88547313 88547361 48 ACTCCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATA ...::..................xx........:...:.:.:.:.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 29819664 NA +3149 chr4 + 190214555 118369893 118369892 118369966 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAATCCAAGAGACGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx:x...x::......:...::..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 42336689 NA +3430 chr4 + 190214555 118371600 118371599 118371673 74 GTGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:.:.........::........x.xx.x...x...........x.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 42338396 NA +3099 chr4 + 190214555 118375187 118375186 118375261 75 TGTCTTTCATTGTTTTTTTTTTTTTATTTTTTTTTTTTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTG chr4 + 94230402 10558388 10558387 10558462 10558388 10558387 10558462 75 TGCATTTCATGCTTTCCATTGTTTTTTTTTCCTTTTCCTTATTTTTTTCTTGTCTTGACACAAAGCAGCGTTTTG ..:x......xx...::x..x....x....::....::..........:..x.:....x..::..:xx..:.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 107816799 82397756 +3111 chr4 + 190214555 118376240 118376239 118376312 73 CTTATCTTAAAAAACAAAAACAGCAACAACAACAACAACAACAAAAAAACAAAACAAAAAAGCCAAAGGAAAC chr4 + 94230402 23689323 23689322 23689395 23689323 23689322 23689395 73 CTCACTCTAGATAAGAAAAAAAGAAACAACAACAACAACAAAAAACAACCAACAAACAGATTCAAAATGAAAC ..:.:::..:.x..x.....x..x.................x...x..x...x.x.x.:.xx.x...x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 94686917 NA +3168 chr4 + 190214555 118376249 118376248 118376305 57 AAAAACAAAAACAGCAACAACAACAACAACAACAAAAAAACAAAACAAAAAAGCCAA chr4 + 94230402 34833676 34833675 34833732 34833676 34833675 34833732 57 AAAATTAAAAACAACAACAACCACCACCAAAACAAATCAACAAACCAAAAAACCCAA ....x:.......:.......x..x..x.x......xx......x.......x.... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 83542573 NA +3737 chr4 + 190214555 118378729 118378728 118378811 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGTTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:...........::........x.xx.x...x::...........:..x.xx:.x:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 42345532 NA +3882 chr4 + 190214555 118384017 118384016 118384243 227 AGTAATTATTATATTACTAAGGCATATTAGTAATTATTTTGATTACTAACATCTTAAAATTTCTTTTCTCTTTCTCTTTCTCTCCCTTCCTTTCTTC-CTTCCCTTCCCCTTCCTTTCTTCGTTCCTTCCTTCC--------TTCCTTCCTTTTTCTTTTCTCTTTTCTTTCTCCTTCCTTCCCTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTCTCTCTTTCTTTCTCTCTCT chr4 + 94230402 33237530 33237529 33237758 33237530 33237529 33237758 229 AGTAACTGTTAAATTAAT---GTCTACTAAAAAGTGCTGCTTCCATTAG----TGAGGGTTTTATCCGTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCT .....:.:...x....x.---.:x..:..:x..x.::.x:xx::.:..:----.x.:::...:x.::x...:..::..:.:.x....x...x...:x-:...:xx...:x.::..:..x..x:..x:.x:..x.--------..:::......x.....xx...x.....::x....x:....:..x:.::...x:.:.::::::.:..:..x.:::.x.::.x....x....... 18M3D28M4D44M1I36M8I94M 127/220 57.7% 229/94230402 0.0% 16/220 7.3% 85146487 NA +4555 chr4 + 190214555 118384087 118384086 118384250 164 TTTCTCTTTCTCTCCCTTCCTTTCTTCCTTCCCTTCCCCTTCCTTTCTTCGTTCCTTCCTTCCTTC--CTTCCTTTTTCTTTTCTCTTTTCTTTCT---CCTTCCTTCCCTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTCTCTCTTTCTTTCTCTCTCTGTCTCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCT---------CCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .....x.:..x..x.::.............:x:::x...x:::..x.x.:....:...:x.:...:--x...x.....x.:....:.:..::...x---..:x...:...x:....:.x:..---------....::.....:....:.:.x....::x:x.:..:... 66M2I28M3I23M9D38M 101/155 65.2% 160/94230402 0.0% 14/155 9.0% 68207820 NA +3737 chr4 + 190214555 118384097 118384096 118384172 76 TCTCCCTTCCTTTCTTCCTTCCCTTCCCCTTCCTTTCTTCGTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTCTCTT chr4 + 94230402 65128748 65128747 65128823 65128748 65128747 65128823 76 TCTCTCTTGCTTTCCTCTTTCTCTTACCCTTCTGTCCCACAGTCCTTCTTTCCTTCTAATCTTTGTCTTTCTCCTT ....:...x.....:..:...:...x......:x.:.:x.:x......:.......:xx:....x.....:::... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 53255349 NA +3452 chr4 + 190214555 118384141 118384140 118384240 100 CTTCCTTCCTTCCTTCCTTTTTCTTTTCTCTTTTCTTTCTCCTTCCTTCCCTCTTTCCTTCCTTCCT--TCCTTCCT--TTCTTTCTCT---CTCTTTCTTTCTCTC chr4 + 94230402 12052499 12052498 12052605 12052499 12052498 12052605 107 CTTTTTTTCTGCCTTTCTATTTCCTTTCTCTTTTTTTTCCCCTTGTTTCTCTAAGCCCTGGTTTCTTTATCCACCCTAGTTCTTGTGCTGAGCTGTTTCCTTTTCTC ...::..:..x....:..x....:..........:....:....x:...:..xxx:...xx:...:.--...x:...--.....x:x..---..x....:..:.... 67M2I8M2I10M3I15M 72/100 72.0% 107/94230402 0.0% 7/100 7.0% 106331642 83882913 +3436 chr4 + 190214555 118394890 118394889 118394999 110 CTGTGTGACTGTGCCACTGCACTCCGCTTTAGACAACAGAGTAAGACCCTGT--CTCTATTTAAAAAAAAAAAAAAAAAAAAAAAAAGCAGCAGCAAACTTTTTTTCCCTGC chr4 + 94230402 69854847 69854846 69854950 69854847 69854846 69854950 104 CTGTTCAACATTGCCATAGCA----ACCTTAG----CATAGTAAAAGCTTATACCTTTCTGTAGAAACAGAAAAAAAAAAAAAAAAAACAGGTACAGAATTGCTTTCCCTGC ....x::..xx.....:x...----:.:....----..x.....:.x.:.:.--..:.x.x..:...x.:.................:...xx:..:.x..x:......... 21M4D7M4D16M2I58M 74/102 72.5% 104/94230402 0.0% 10/102 9.8% 48540043 NA +3235 chr4 + 190214555 118399305 118399304 118399370 66 CTGATTTTTGTGTTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTTTT---GTAGAAATAGAG chr4 + 94230402 25576008 25576007 25576074 25576008 25576007 25576074 67 CTGGTTTTTGG--TTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTTTAAACAGAAATACAG ...:......x--...x.......x...x..x................:.....---::.......x.. 11M2D41M3I12M 54/64 84.4% 67/94230402 0.0% 5/64 7.8% 92823297 NA +3087 chr4 + 190214555 118399311 118399310 118399354 44 TTTGTGTTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTT chr4 + 94230402 68264453 68264452 68264496 68264453 68264452 68264496 44 TTTGTGATTTTTATGTTTTTTGTTTTGTTTTCGTTCGTTTTTTT ......x.....x..................xx..:........ 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 50134858 NA +3059 chr4 + 190214555 118422683 118422682 118422746 64 AGTGGCACACACCTGAAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCAG chr4 + 94230402 76033200 76033199 76033261 76033200 76033199 76033261 62 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG .....::...:--..x.:.:...........::.:......x.xx.x...x.:........... 11M2D51M 47/62 75.8% 62/94230402 0.0% 2/62 3.2% 42389483 NA +3153 chr4 + 190214555 118451931 118451930 118452004 74 AAGGAATTTGTGTGTGTGTGTGTGTGTATATATATATATATATA---TATATATTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 33250991 33250990 33251067 33250991 33250990 33251067 77 AGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGA .:..xx...x.x.............:.....:.:........x.---.x.:.x.x.....x..x.......x::... 44M3I30M 56/74 75.7% 77/94230402 0.0% 3/74 4.1% 85200940 NA +3393 chr4 + 190214555 118451934 118451933 118452000 67 GAATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATA---TATATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250992 33250991 33251061 33250992 33250991 33251061 70 GGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .::...x.x.x...................:.:........x.---.x.:...x.....x..x....... 43M3I24M 54/67 80.6% 70/94230402 0.0% 3/67 4.5% 85200942 NA +3263 chr4 + 190214555 118451935 118451934 118452002 68 AATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 23522760 23522759 23522827 23522760 23522759 23522827 68 AAATTGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCAA ..x...x.x..::..........................x:x.x.x::.x.....:.x....:..::. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 94929175 NA +3086 chr4 + 190214555 118451936 118451935 118451994 59 ATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 29797145 29797144 29797203 29797145 29797144 29797203 59 ATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT ..x:..:..:......:......x.........:.:.:.x.x.x......x:.....:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 88654791 NA +3076 chr4 + 190214555 118451941 118451940 118452000 60 TGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522823 23522764 23522763 23522823 60 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCT ..x.x..::........:.................x:x.x..::.x.....:.x....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 94929177 NA +3017 chr4 + 190214555 118451960 118451959 118451998 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 93659334 NA +3770 chr4 + 190214555 118452337 118452336 118452429 93 ACATGGTGGTGGGCACCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGGTAATTACTTGAACCCAGGAGGCAGAGGCTGTA----ATGA-GCCAAG chr4 + 94230402 76033196 76033195 76033291 76033196 76033195 76033291 96 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ...::......--...x....:::...........::........x.xx.xx..x:............:..x:xx:.......----....-...... 11M2D70M4I4M1I6M 70/91 76.9% 96/94230402 0.0% 7/91 7.7% 42419141 NA +3139 chr4 + 190214555 118466688 118466687 118466727 40 CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 43218639 NA +3353 chr4 + 190214555 118466690 118466689 118466729 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 43218641 NA +3567 chr4 + 190214555 118466692 118466691 118466731 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 43218643 NA +3102 chr4 + 190214555 118466694 118466693 118466729 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 105865390 84349165 +3353 chr4 + 190214555 118466694 118466693 118466733 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 43218645 NA +3139 chr4 + 190214555 118466696 118466695 118466735 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 43218647 NA +3316 chr4 + 190214555 118466696 118466695 118466731 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 105865392 84349163 +3102 chr4 + 190214555 118466698 118466697 118466733 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 105865394 84349161 +3062 chr4 + 190214555 118468793 118468792 118468864 72 GCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTGTAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........:x.:........x.xx.x...x.:..xx.......:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 42435587 NA +3185 chr4 + 190214555 118531434 118531433 118531479 46 TTTGTTTTTTGTTGTTGTTGTTTTGTTGGATTTTTTTTTTTTTTTT chr4 + 94230402 64178430 64178429 64178475 64178430 64178429 64178475 46 TTTGTTTGTTGTTGTTATTGTTTGGTTGGGTTTTTTTTGTTTGTTT .......x........:......x.....:........x...x... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 54353004 NA +3461 chr4 + 190214555 118565320 118565319 118565392 73 AACCTTTAACAAAATACTGATGTTTTTTGTTCTTTTTCTTTTTTCTTTTTTTCTTTTTCTTCAGAGACAGGAT chr4 + 94230402 4853176 4853175 4853246 4853176 4853175 4853246 71 AACTGCTAATACAATAC--ATGTTTGTTGTTGTTACTTTTTTTTCTTTTTTTCTTTTTTTCCAAAAAGAAAAT ...:x:...:.x.....--......x.....x..x:.:....................:.:..:.:.x.::.. 17M2D54M 54/71 76.1% 71/94230402 0.0% 2/71 2.8% 113712144 76502411 +3607 chr4 + 190214555 118579328 118579327 118579424 97 ATACAAAAATTAGGCATGGTAGCGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x..::..x.x:..::..:.:....:--......:...........::........x:xx.x...x::........:..:..x:xx:..:..:.. 28M2D67M 63/95 66.3% 95/94230402 0.0% 2/95 2.1% 42546145 NA +3273 chr4 + 190214555 118601833 118601832 118601925 93 GAAATAAAATTTATTCCTTTCCTTTCCTTTTCTTCC----TTCTTTCCCTTCTCCTCCCTTTTCTTCCCTTCCCCTCCCTCCCTCTCTCTCTCCCTC chr4 + 94230402 86491047 86491046 86491143 86491047 86491046 86491143 97 GAAACAATATGTTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTC ....:..x..x.x.:xx...::...::....:..:.----...::::...x.x::.:.::......:::..::..:...:......x.:.:...... 36M4I57M 59/93 63.4% 97/94230402 0.0% 4/93 4.3% 32110786 NA +3128 chr4 + 190214555 118601875 118601874 118601931 57 CCCTTCTCCTCCCTTTTCTTCCCTTCCCCTCCCTCCCTCTCTCTCTCCCTCCCTCCC chr4 + 94230402 12085019 12085018 12085075 12085019 12085018 12085075 57 CCCACTTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTC ...x::....:.:x..x:...x.....:...:........:........:..::.:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 106516856 83697699 +3030 chr4 + 190214555 118601959 118601958 118602012 54 TTCTCTCTTTCCCTTCCTTCCTTTCCTTCTTTTCCTTCCTTCCTTTCCTTCCCT chr4 + 94230402 16107951 16107950 16108004 16107951 16107950 16108004 54 TTTTCTATTTTCCGACATTCTATTCCTTTTTTTCCTTCCTTCTTCTCTTTCCTT ..:...x...:..xx.x...:x......:.............:.:..:....:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 102494008 87720547 +4134 chr4 + 190214555 118608195 118608194 118608295 101 ATAAAAAAATGAGCTACACGTTGCAGTGCACACCTGTAGTCCCAGCTACTGGGGAGGCTAAGACTGGAGGATCACTTGAGTCTAGAAGGTTGAGGCTGTAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGA--TACACAGTG----GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...::....--.....:x..----.::...x......:.........x.::.....:..x.:x.x.:.x.......::.:.....x..x:........ 12M2D9M4D74M 70/95 73.7% 95/94230402 0.0% 6/95 6.3% 42575012 NA +3697 chr4 + 190214555 118624885 118624884 118624956 72 GCACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........:.........x.xx.x...x........:.::.:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 42591679 NA +3103 chr4 + 190214555 118628564 118628563 118628637 74 TGTTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGGAGGCTGAGACTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGCTTTGGGCTGTAG ..:x.x......:...........::........x:xx.x.:.x.......:....-.:..x:.x:.:...:.. 56M1D17M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% 42595359 NA +3545 chr4 + 190214555 118641160 118641159 118641229 70 ACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....:.:...........::........x.xx.x...x...........x.:..x.xx:..:..:.. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 42607952 NA +3170 chr4 + 190214555 118670732 118670731 118670798 67 ACTCTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAA--AAAGAAAAAGAA chr4 + 94230402 72824131 72824130 72824199 72824131 72824130 72824199 69 ACTATTTTCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAAATAA ...x.x.:.....:..:.......:.....:...:.x.......x.x.:x...x.--.........x.. 55M2I12M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 45846601 NA +3527 chr4 + 190214555 118670741 118670740 118670837 97 AAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAA---AAATAAATAAGTAAGTAAATAAATAAAT chr4 + 94230402 24434179 24434178 24434278 24434179 24434178 24434278 100 AGAATAAAAAAAAAAAAAGTCATAGAGAAGGAGATGACTGAGAAAAGGAGTAAAATAAAAAAAAAGTAATATAAACAAACCAGAATGTTGAAGAATAAAT .:..x.............:xx.x.::...:..:.x:.xx:......::..x....x..........x..---...:...:x..x.x..x:.x:....... 69M3I28M 68/97 70.1% 100/94230402 0.0% 3/97 3.1% 94236562 NA +3009 chr4 + 190214555 118670747 118670746 118670817 71 AAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAAAAATAAAT chr4 + 94230402 87344001 87344000 87344071 87344001 87344000 87344071 71 AAAGAAGGATAAGAAAAACAGCAAGAAATGTTTGGGAGAGAAAGAGAAGGAAAAGAAAAGGGAAAACACAT ...:..::.x..:.....x:.x......x:xxx::..:.:.....:..:.....:......:....:.x.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 31326746 NA +3393 chr4 + 190214555 118670757 118670756 118670866 110 AAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAAAA-----ATAAATAAGT---------AAGTAAATAAATAAATAAATAAATAAATAAATAAATAAAAGCAAC chr4 + 94230402 84536568 84536567 84536691 84536568 84536567 84536691 124 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGAC ..:::...:.............x..x.....x..:..:x...:........:...-----.x:..x....---------..:.x.::.:x.:..xx.x.x..x.:.x.:.....:.:...x:.. 55M5I10M9I45M 76/110 69.1% 124/94230402 0.0% 14/110 12.7% 34134189 NA +3112 chr4 + 190214555 118670777 118670776 118670820 44 AAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAAAAATAAATAAG chr4 + 94230402 27719997 27719996 27720040 27719997 27719996 27720040 44 AAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAG ..:.......:.:.............:.....:.......x:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 90950780 NA +3097 chr4 + 190214555 118677363 118677362 118677463 101 AAAAGAGATAAATTACAAATTACAAATAAATTACCTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTGAGACGGAGTTTTGCTCTTTT chr4 + 94230402 81168716 81168715 81168824 81168716 81168715 81168824 109 AGAAAAGAGAGAATAAAGGCAGGAAGAAAATGACTTTTTCTCATTTTCTTTTTTTTTTTTTTCCTCCTCTTTCTCCCATTCATTTATTGATTTAGCCtttttttttttt .:..:...x.:.x..x.:::x:x..:x....x..:....:.:x...................::.::.:...:.--------...x....xx::.xx....x:.:.... 74M8I27M 66/101 65.3% 109/94230402 0.0% 8/101 7.9% 37508647 NA +3438 chr4 + 190214555 118678179 118678178 118678252 74 GTGCACCTGTTGTCCTAGCTACTTGGGAGGCTGAAGTGAGAGGATTACTTGAGCCCAGGAGTTTGAGATTATAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...x..:.:.........::.......:x:xx.x.:.x:......:.....:..:..x:.::.:... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 42644975 NA +4543 chr4 + 190214555 118678294 118678293 118678448 155 AGCAAGAGATTCTTT------TTGAGGAAAAAAAAAAAGAAGAAAGAAAAGGAAAGAAAAAAAGAAAAAGAAAGAGAGAGACACAG-AAAGAAAGAAATAGAGAGAAAGAGAGAGAGAAAGAAAGGAAGAAAGAAAGAAA-AAGAAAGAGAGAGAAAGAGGAA chr4 + 94230402 65771177 65771176 65771337 65771177 65771176 65771337 161 AGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGA--GAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA .......:..x.:..------:............:.--...x...::.:..:....x.x....:xx.:..:..:::...:x:.x..-:..:.x...x:.x::...:...:......:x...x.....:x.x......x..-..x....xx..x:...:.::.. 15M6I15M2D48M1I53M1I22M 104/153 68.0% 161/94230402 0.0% 10/153 6.5% 52907117 NA +3902 chr4 + 190214555 118678332 118678331 118678468 137 AGAAAAGGAAAGAAAAAAAGAAAAAGAAAGAGAGAGA-----------CACAGAAAGAAAGAAATAGAGAGAAAG-AGAGAGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAGAGAGAAAGAGGAAAGGAAAGAAGGAAAGAAAGA chr4 + 94230402 65771192 65771191 65771340 65771192 65771191 65771340 149 AGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ....:.xx:.:..........:..x:.........:.-----------..x..:..::.....x.....x....:-...x:xx:::..:....:...:.:x...x..::::x.x...:..x..x.:x....xx.:x..::...:..x.. 37M11I27M1I73M 89/137 65.0% 149/94230402 0.0% 12/137 8.8% 52907140 NA +3224 chr4 + 190214555 118678340 118678339 118678494 155 AAAGAAAAAAAGAAAAAGAAAGAGAGAGACACAGAAAGAAAGAAATAGAGAGAAAGAGAGAG-----AGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAGAGAGAAAGAGGAAAGGAAAGAAGGAAAGAAAGAAGAGGAGGAGGAGGAAGAAGAAAGAA chr4 + 94230402 45017392 45017391 45017550 45017392 45017391 45017550 159 AAAGAAAGATGGAATAGATATGGCAAGTATTTAGAGA-AGGGGAACAGACTGTAAGGAAAGGCTGTTGGAAAGGAAAAAAAAGCGAAAGAAACAGAATGGGAGAGAAACAACATGAAAGAGACTGATAAAACTGCGACTAGCATGAAGAAGCTGAAAGGA .......:.x:...x.::x.x.:x.::x.:x:...:.-.::.:..:...xx.x...::.::.-----:.....:..::..:.:x........x....x.:........x.:x.x:::.:...xx..x.:..xx:x..xx..x.x..:....xx.....:. 37M1D24M5I93M 92/154 59.7% 159/94230402 0.0% 6/154 3.9% 73660948 NA +3724 chr4 + 190214555 118718174 118718173 118718245 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 42684968 NA +3230 chr4 + 190214555 118746180 118746179 118746238 59 AGGAAGAAAAGGAGGAAAGAAGGAAGGAAGGAGGGAGGGGAGGTTGGGGGAGGGAGGGA chr4 + 94230402 4727061 4727060 4727117 4727061 4727060 4727117 57 AGAGAGAAAAGGTTAAAAAAAAAAA--AAGGGGGGGGGGGGGGTTGGGGTAGGGAGGGA ..::........xx:...:..::..--....:...:....:........x......... 25M2D32M 45/57 78.9% 57/94230402 0.0% 2/57 3.5% 114019119 76195436 +3283 chr4 + 190214555 118748121 118748120 118748208 88 TGGGGCGTGGTGGCACACATCTATAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGCATCACTTGAACCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033192 76033191 76033277 76033192 76033191 76033277 86 TGATACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x:.:::....::...:.--:....:...........::...x....x.xx.x.x.x..........:..:..x.xx:..:..:.. 20M2D66M 58/86 67.4% 86/94230402 0.0% 2/86 2.3% 42714929 NA +3096 chr4 + 190214555 118793327 118793326 118793396 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 42760130 NA +3018 chr4 + 190214555 118807486 118807485 118807551 66 TAAAAGGAAAAAAAAATGGAGAGGGTGTAAGAAGAGGAAAAAAAAAAAATGGAGAAACAGGAAGTG chr4 + 94230402 12523338 12523337 12523403 12523338 12523337 12523403 66 TAATGAGAAAAAAAGAAAGCGAGGATGCAAGCAGGGGAAAAAAAAAACAAAGGCAGTCAGGAACTG ...x::........:.x:.x....:..:...x..:............x.x:.:x.:x......x.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 106284148 83930407 +3215 chr4 + 190214555 118815773 118815772 118815879 107 CTCTCTGACTTCTGCAAAGTACATGACAGAGATGTTTGTTTTCCTGACATAAAGCAAGAGGACACCCTTAGAAACACATGTTTGGGTTTTTTGCCACAAATTGAAAT chr4 + 94230402 79766910 79766909 79767015 79766910 79766909 79767015 106 CTCCAGGACTTCTTTAG-GCATTGAACAGAGATTTGTGTTTTACTGAGATAAAGCAGGATGTCATCTGTGAAAAGAGCAATTTATGTCCTTTGTCATGGATTGTGAT ...:xx.......x:.:-.:.:xx:........x.x......x....x........:..x.x..:.:x.::...x.xxx:...:x..::....:..:::....x:.. 17M1D89M 68/106 64.2% 106/94230402 0.0% 1/106 0.9% 39048863 NA +3165 chr4 + 190214555 118846828 118846827 118846872 45 AGCTTCTTAAAAAAGTATATACACACACACACACACACACACACA chr4 + 94230402 85550408 85550407 85550452 85550408 85550407 85550452 45 AACATTTTAAAAAATTATATGCACACACATACATACACACACACA .:.x.:........x.....:........:...:........... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 33296420 NA +3058 chr4 + 190214555 118855885 118855884 118855926 42 ATCTCTCTCCCTCTTTCTCTTTCTTTTTCCCTTTTTCTTTTT chr4 + 94230402 87791851 87791850 87791892 87791851 87791850 87791892 42 ATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTT .....:....:..:.:..:...:.....:............. 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 31064034 NA +3227 chr4 + 190214555 118862778 118862777 118862842 65 TTGTAGTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTCTTTTGCTTTTTTGAAATGGAATCTTG chr4 + 94230402 46595226 46595225 46595290 46595226 46595225 46595290 65 TTGTGGTTTTGTTGTTTTTCGTTGGTTTTTTTTTTTTTCCTTCTCTCTTTTGCAATGAAACACTG ....:.....x..x.:....x..xx..:...........:..:x..:.....x....:..:x:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 72267552 NA +3171 chr4 + 190214555 118876579 118876578 118876662 84 TTTGTTCAGATACTTTTCCTTCC---CTCCCTCCCTCCTCCTTCTTTTCTCTTTTCTTTCTTCCTTCCTTTCTTCCTTCCTTCCTTC chr4 + 94230402 57538435 57538434 57538510 57538435 57538434 57538510 76 TCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCT-----------CTTCCTTTATTCCCTCCCTCCTCC .:..x.:x.x.......:....:---........:.......x:.x..:...-----------........x....:...:....:. 23M3I26M11D24M 57/73 78.1% 76/94230402 0.0% 14/73 19.2% 61338144 NA +3541 chr4 + 190214555 118876614 118876613 118876802 189 TCCTTCTTTTCTCTTTTCTTTCTTCCTTCCTTTCTTCC----TTCCTTCCTTCCTTTCTCTTTCTTTCTTTCT---TTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTGCCTTTCTCTGTCTCTCTCTCTCTTTCCCTTTCCTTCCCTTTTCTTTTTTTTTCTTTCTTCCTT chr4 + 94230402 19215364 19215363 19215566 19215364 19215363 19215566 203 TTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCT---TCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:.:x....:x......xx:x:x.:..:...xx.x:..----::..::...:..:::.:.:..:...:...:.---....-----......x..::...x......xxx....x.x..:-----...::...:x..::..:....x.:..:.:xxx..---......xx.:...:::.x....x.x.....:.x..:.::x..::. 38M4I31M3I4M5I34M5I34M3D45M 115/186 61.8% 203/94230402 0.0% 20/186 10.8% 99661250 90553305 +3041 chr4 + 190214555 118876663 118876662 118876747 85 CTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ....:.....::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xxx:x...... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 61504637 NA +3525 chr4 + 190214555 118876669 118876668 118876789 121 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTCTGTCTCTCTCTCTCTTTCCCTTTCCTTCCCTTTTCTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCC---CTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:xx::....x.x....:......:.---.:....:...:.:.::.:...x... 18M5I75M3D25M 76/118 64.4% 123/94230402 0.0% 8/118 6.8% 55179552 NA +3960 chr4 + 190214555 118876681 118876680 118876816 136 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTCTGTCTCTCTCTCTCTTTCCCTTTCCTTCCCTTTTCTTTTTTTTTCTTTCTTCCTTCTTTTTGTTTGAGA chr4 + 94230402 63697117 63697116 63697243 63697117 63697116 63697243 127 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCT------TTCTTCCTTTTTATTTAAGA ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....x.:....x...xxxx.::.:x..:....x.xx..:...:..:::..:....:.------...:.:......:...:... 13M3D94M6D20M 83/127 65.4% 127/94230402 0.0% 9/127 7.1% 55179564 NA +3070 chr4 + 190214555 118890700 118890699 118890753 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:xx.:...:...x...::..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 92312434 NA +3295 chr4 + 190214555 118890702 118890701 118890755 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.:x..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 92312436 NA +3181 chr4 + 190214555 118890704 118890703 118890758 55 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTAG chr4 + 94230402 26578266 26578265 26578320 26578266 26578265 26578320 55 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGG .:...................:.:.:.:.:.xx..:...:...x...::....:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 92312438 NA +3613 chr4 + 190214555 118900645 118900644 118900727 83 TCTTACCCTAGAAT----CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA chr4 + 94230402 4618321 4618320 4618407 4618321 4618320 4618407 87 TTTTGCCCTATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .:..:.....x.x.----..x...:...:...:x:x.::.x.......::..............::x...::......x.x...... 14M4I69M 60/83 72.3% 87/94230402 0.0% 4/83 4.8% 114282324 75932231 +3252 chr4 + 190214555 118900658 118900657 118900730 73 TCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT--CTCTCTATATATATATATATA-TATATATATAT chr4 + 94230402 4618344 4618343 4618419 4618344 4618343 4618419 76 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .:.......:x:x.::.x.......::..............--..x.x:......x.x......-....x...... 41M2I21M1I11M 57/73 78.1% 76/94230402 0.0% 3/73 4.1% 114282314 75932241 +3153 chr4 + 190214555 118900658 118900657 118900732 75 TCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT--CTCTATATATATATATATATA-TATATATATAT chr4 + 94230402 4618342 4618341 4618419 4618342 4618341 4618419 78 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .:.:.:.:...:x:x.::.x.......::..............--..x.::......x.x......-....x...... 43M2I21M1I11M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% 114282316 75932239 +3489 chr4 + 190214555 118900660 118900659 118900734 75 TCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT--CTATATATATATATATATATA-TATATATATGT chr4 + 94230402 4618342 4618341 4618419 4618342 4618341 4618419 78 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .:.....:...:x:x.::.x.......::..............--....::......x.x......-....x....:. 43M2I21M1I11M 58/75 77.3% 78/94230402 0.0% 3/75 4.0% 114282318 75932237 +3170 chr4 + 190214555 118900661 118900660 118900729 69 CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATA chr4 + 94230402 4618339 4618338 4618407 4618339 4618338 4618407 69 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ..x.:.:...:...:x:x.::.x.......::............x.::x...::......x.x...... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 114282322 75932233 +3093 chr4 + 190214555 118900680 118900679 118900736 57 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATGTCT chr4 + 94230402 60831530 60831529 60831586 60831530 60831529 60831586 57 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 58069150 NA +3025 chr4 + 190214555 118900682 118900681 118900750 69 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATGTCTGTCTGTCTATCTAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x.............:.:.......:.:....:.:.:.:::.::::.x.xx:.x:..:... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 58069152 NA +3810 chr4 + 190214555 118916630 118916629 118916750 121 TATAATAAACTTTTTATTCTTAGATATAATGCTGTTTTTGAAGTTTCAGAGCATTTCTGCTTTCTTTTTCTTCTTCCTCTTCCTCTTTTATTTTTCTTTCTTTTTTTTTTTTTTTTTTCTA chr4 + 94230402 50052595 50052594 50052708 50052595 50052594 50052708 114 TACATTAAACTATTTCTT--TAGATATCAAGCA---TTTGTACCTTTCAAACAGTGCTG--TTGATCATCATCCCTCTCCTCCTCTTGCATTTTTGTCTCTTTTCTTTTTTTTTTTTTTTA ..:.x......x...x..--.......x.x..x---....x.x:..:x:.:..x.x...--..xx.:x..x..:::...:.......x:......x.:......:.............:.. 18M2D13M3D23M2D60M 83/114 72.8% 114/94230402 0.0% 7/114 6.1% 68864035 NA +4042 chr4 + 190214555 118930780 118930779 118930860 81 CATTGTGGCACAGCTGTAGCCCCAGCTACTTGGGAAGCTGAGGTGGGTGGATCACTTGAGCCCGGAAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....::..xx.....::...........::.:......x:xx...:.x.......:...:....x..x:.....:.. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 42897583 NA +3437 chr4 + 190214555 118942977 118942976 118943067 91 TGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:.x....:.:...........::........x.xx.x...x.x........::.:..x:xx:..:..:..------..x..x...... 73M6D12M 61/85 71.8% 85/94230402 0.0% 6/85 7.1% 42909772 NA +3335 chr4 + 190214555 118956909 118956908 118956987 79 GTGGTGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x::.--.:..:.:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 42923708 NA +3096 chr4 + 190214555 118997100 118997099 118997169 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 42963903 NA +3074 chr4 + 190214555 119067060 119067059 119067122 63 TGGTGATGTACAGTTGGGTTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAAC chr4 + 94230402 34633436 34633435 34633497 34633436 34633435 34633497 62 TGGTGCTCTATAGTGGGGCTTTTTGTGTGGGTGTTATTTTTGTTTGTT-TTTTCCCCTCTCAC .....x.x..:...x...:....x......:...:x...:........-x...:..:...x.. 48M1D14M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 84433624 NA +3447 chr4 + 190214555 119068279 119068278 119068352 74 GTGCACCTGTAATCCCAGCTATTCAGGAGGCTGAGGCACAAAAATCACTTGAACCCAGGAGGTAGAGATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......:.::::........x.x::x:..x.............:..x.xx:.::..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 43035075 NA +3019 chr4 + 190214555 119097160 119097159 119097219 60 GTGTGTGTGTGCATGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTGTATGTATCTAT chr4 + 94230402 86633929 86633928 86633988 86633929 86633928 86633988 60 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGT ...:...:..:x:.:.:...x.....::...:......:.:.:::.x......:....:. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 32463231 NA +3255 chr4 + 190214555 119101396 119101395 119101502 107 GAAAGAAAAGAAAGAAAGAAAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAA------GAAAAGAAAGAAAAAAAAGA chr4 + 94230402 12647118 12647117 12647229 12647118 12647117 12647229 112 GAAGGTAATGAATGCAAGGGGGGGGGA-AGAGGGAAAATTAATGGGAAGAAATTAAAGGAGAAAATAAAAATGGGAAAATAGGACAAGGTTGTGAGGGGAAAAAAAAAAAAGA ...:.x..x...x.x...:::.:.:..-.....:..:.xx:.x:.:......xx..:::.....:x..:..x.:....:x.:..x..------..:::....:.......... 27M1D59M6I20M 70/106 66.0% 112/94230402 0.0% 7/106 6.6% 106454278 83760277 +3162 chr4 + 190214555 119101435 119101434 119101514 80 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAAAAAAGAAGGAAGGAAGGA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..:..:x.:...xx.x...x.........:..:...........:..x..:.xx.:.:...:x..::x.x:.:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 43859928 NA +3955 chr4 + 190214555 119119978 119119977 119120067 90 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAATCCGGGAGCTGGAGGTTGTGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x......:...........::........x.xx.x...x.x......:..:.:....xx:..:...:.------..x..x...... 72M6D12M 64/84 76.2% 84/94230402 0.0% 6/84 7.1% 43086772 NA +3190 chr4 + 190214555 119129934 119129933 119130085 152 ATATACGTTTTTGTTTGTTTGTTTTCTGTTTTTTGTTTTTTTGGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGT------------------GGCGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCC---TCAGCCTCCCGA chr4 + 94230402 28925004 28925003 28925166 28925004 28925003 28925166 163 ATATAAGTTTTTTTTTGTTTGTTTTTTGTTTTTTGCTTTTAAGCATG-GCAGTCTAACTTTATTACATCAGCAAAACTCTAGTTTTCTATATGTTCCCAAGAAGTCAATTTTGGCT------ATGCTCAACCTCC---GTTCCCAGCTTTCTCCATCCTATTAAGCCTCCCAA .....x......x............:.........:....xx.x.x:-.x.....x:..:.:.::.x:x:..x::.x.x:...------------------::xx....:......------.x....x:.....---....x.:x.x......xx..---.x........:. 47M1D35M18I15M6D13M3D20M3I12M 100/142 70.4% 163/94230402 0.0% 31/142 21.8% 90204930 NA +3489 chr4 + 190214555 119158417 119158416 119158494 78 ATGGTGGTGCACACTTGTAGTCCCAGCTACTTGGGGGGCTGGGGTAGGAGGATCATTTGAGCCCAGGAG----GGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.........:--......:...........:::.....:.x:xx.x.:.x..:....:.....:..----......:.. 13M2D54M4I9M 57/76 75.0% 80/94230402 0.0% 6/76 7.9% 43125219 NA +3232 chr4 + 190214555 119171800 119171799 119171856 57 TTTTTCCAAACACACAAACACACACACACACACACAAAACAAAACAAAACAAAAAAA chr4 + 94230402 55291422 55291421 55291478 55291422 55291421 55291478 57 TTTGTCCAAACAAACAAACAAACCCACACACGTAAATTATAAAACAAAACAGAGAAA ...x........x.......x..x.......::.x.xx.:...........:.:... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 63880378 NA +3111 chr4 + 190214555 119171816 119171815 119171882 67 AACACACACACACACACACAAAACAAAACAAAACAAAAAAACAGAAGAAAGAGACAAAGAGAAAGAA chr4 + 94230402 58764817 58764816 58764883 58764817 58764816 58764883 67 AAAACACACACACACACACAAAAAAAAAACAAATCAAAGAACTGCAAACAAGCATGAAAGAAAAGAA ..x....................x....xx...:x...:...x.x.:.x.::x.::..:::...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 60406999 NA +3381 chr4 + 190214555 119185076 119185075 119185156 81 TTTTCTTTCCTCTTCTCCCCTCTCCCTTCCCTTCCCCTCCCCTCCCCTTCCCTTTCCTTTTCTTTTTTTCCTTTCGTTTCC chr4 + 94230402 53757784 53757783 53757860 53757784 53757783 53757860 77 TTCTCTTCCATCTTTT----TCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCC ..:....:.x....:.----..x..::.:xxx.....:....:....:::.....::...:.........:...:x..:.. 16M4D61M 54/77 70.1% 77/94230402 0.0% 4/77 5.2% 65427292 NA +3089 chr4 + 190214555 119185093 119185092 119185139 47 CCCTCTCCCTTCCCTTCCCCTCCCCTCCCCTTCCCTTTCCTTTTCTT chr4 + 94230402 82545444 82545443 82545490 82545444 82545443 82545490 47 CCTTCCCCCTTCCTTTCCTCTCACCTCCTCCTCCCTTTCCTCATCCT ..:..:.......:....:...x.....:.:..........:x..:. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 36639649 NA +3035 chr4 + 190214555 119214093 119214092 119214152 60 AGACCCTTCGTCCTGTTAAAGATAAATTAAAAAAAAAAAAAAAAAACCAAAGGGAACAAA chr4 + 94230402 79219624 79219623 79219683 79219624 79219623 79219683 60 AGACCTTTTGGATTATTAATGAATGATTGAAAAAAAAAAAAAAAGACCAAAAAAAAGAAA .....:..:.xx:.:....x..xx:...:...............:......:::..x... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 39994469 NA +3669 chr4 + 190214555 119243369 119243368 119243440 72 GCACCTGTAGTTCCAGCTACTCAGGAGGCTGAGACACAAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x................::::........x.x::x...x::...........:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 43210163 NA +3342 chr4 + 190214555 119263925 119263924 119264007 83 CATAGTGGCACCCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....::.--..x......:.........::::........x.xx.x...x::........:..:..x:xx:..:..:.. 11M2D70M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 43230728 NA +3200 chr4 + 190214555 119293418 119293417 119293567 150 TTAATCACTATACATATGTATGTGTATATGTGTATACACATATATAAT------TTTATG------------ATCAATATCTTAGATAT----TTTAGAAAT--TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAATAATTCATTTGTCATA chr4 + 94230402 83331405 83331404 83331575 83331405 83331404 83331575 171 TTAATCATTATGTGTGTATATGTGTATATATATATACACACATAAAATAGAAGCTTTACGTTTGTAGCAGAAATAAATGTTTCAGAAGGAAGATTTAGAAATCATAAATTTGAAGAAGTCAAGT---TAGAGAGAAATAAAAGAATAAACCGATGTAATGACCTGTTCTTTATA .......:...:::.:.:...........:.:........:...x...------....:.------------..x...:.:.:...x:x----.........--.xxx......x.:x::x:.:---:x.x..:.....:..:.x:.::xx...:....:.::::..:x.:... 48M6I6M12I17M4I9M2I20M3D47M 97/147 66.0% 171/94230402 0.0% 27/147 18.4% 35962013 NA +3277 chr4 + 190214555 119303169 119303168 119303248 80 TTATTTCT--CCATCTTCTGGGTCATTTTATTTATTCATTTTGTTGTTATTGTTCTCTTCAATTCTTTTTTTTTTTTTTTTT chr4 + 94230402 65953497 65953496 65953575 65953497 65953496 65953575 79 TTATTTATAACCATTTTAT---TTGTTTTATTTTAATATTTTGTTGTTGTTGTTTTCCTCAATTCCTCCATTTTTCTTCTCT ......x.--....:..x.---.::........xxx:...........:.....:..:.......:.::x.....:..:.:. 8M2I9M3D60M 58/77 75.3% 79/94230402 0.0% 5/77 6.5% 53349672 NA +4214 chr4 + 190214555 119312075 119312074 119312145 71 GACCTTGGGCAAGTTATATAACCTCTCTCTGCCTCAGTTTTCTCATGTGTAAAATGAGACTAATAATAATT chr4 + 94230402 83501141 83501140 83501211 83501141 83501140 83501211 71 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATT ...::.......:...:x......x.x.x.............:..:x.........:::..:...:..... 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% 35810934 NA +9570 chr4 + 190214555 119334280 119334279 119334477 198 TCTTTAATAAGATCTTTTTCTGTTTTTG---TTCTTTTCTTTTATGTACAGGTGCACAAAGCAGGGTCATCAGAAGCCTCTTGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTCAAAGTCATGAACGAATTAAGAAGGTATCATTATACTA-ATGTACATGC chr4 + 94230402 24911925 24911924 24912125 24911925 24911924 24912125 201 TTTTCAAAAACtttttttttaaatcttaactttttttttttttat-tCCAGATGCACCAAACTTTGCCATCAGAAGCCTTTGGATTTGAAAGATGATAACACTGAAATTCACTGTCCTGTTACAGTGAATCCATGGCACATGAAGAAAGCTTTTAAAGTTATGAATGAGTTAAGAAGGTATTAATTCACTGTATACACCTGC .:..:..x..xx.:.....:x:x.:..:---..:....:......-.x...:.....x..:.xxx.:............:.x....::...........:..:....xx.....:..x..x...........x.....:..............:.....:.....:..:............:.x.x:...:-..::..x... 28M3I14M1D145M1I10M 150/197 76.1% 201/94230402 0.0% 5/197 2.5% 94422355 NA +8687 chr4 + 190214555 119344136 119344135 119344281 146 TTTCTCTCTGCTTTTTACACAGTCAAAATTTACTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTATGAAATAGTTTAGT chr4 + 94230402 24916496 24916495 24916641 24916496 24916495 24916641 146 TTTCTCTGATATTTCTAAATAGTCAAAACTTGCTGTGTGATGTGACGATAGTAGCTGAAGACATGGAAATTGCAGCGCACAGAGTTGTGCTAGCCGCCTGCAGCCCCTACTTCCATGCCATGTTTACAGGTACCAAATGTTTCAGT .......xxxx...:..x.:........:..:.....:.....x..:..x..:..x...............x.x..x..:.....x.....:........:..:..:..:..:...................:x....:x..:... 146M 115/146 78.8% 146/94230402 0.0% 0/146 0.0% 94427640 NA +3218 chr4 + 190214555 119347647 119347646 119347716 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:.........:.::........x.xx.x...xx:.x.........:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 43314450 NA +10083 chr4 + 190214555 119354104 119354103 119354237 134 TTTTAGGTGAGATGAGTGAGAGCCGAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTACGTTTACACTGCAGAAATTCAGGTTACAGAAGAAAATGTACAGGTAAGA chr4 + 94230402 24921311 24921310 24921444 24921311 24921310 24921444 134 TTGTAGGTGAGATGAGTGAAAGCCGAGCAAAGAGAATTCGAATAAAGGAAGTTGATGGCTGGACCCTAAGAATACTTATTGACTATATTTACACTGCTGAAATTCAAGTTACAGAAGAAAATGTGCAGGTAAGA ..x................:...............:..x.......:..:..x..............:..:..:..x.....:..::..........x........:.................:......... 134M 117/134 87.3% 134/94230402 0.0% 0/134 0.0% 94432793 NA +3562 chr4 + 190214555 119362685 119362684 119362763 79 GCTGGCTGAAGGGGATGAT----GAGTTTAAGGGTGTTTTTGTTTGTTTGTTTTGTTTTGTTTTTT-GATGGGTAATATTTTAA chr4 + 94230402 39834446 39834445 39834529 39834446 39834445 39834529 84 GTTTGCTGAAGGGGAAGGTTTTTGTGTTGTTGGGTTTTTTTGTTTGTTTGTTTTGCTTTGCTTTTTAGATATGAAATGCTTCAA .:.x...........x.:.----.x...xxx....x...................:....:.....-...:x.x...::..:.. 19M4I43M1I17M 62/79 78.5% 84/94230402 0.0% 5/79 6.3% 79528239 NA +3035 chr4 + 190214555 119362697 119362696 119362746 50 GGATGATGAGTTTAAGGGTGTTTTTGTTTGTTTGTTTTGTTTTGTTTTTT chr4 + 94230402 86593712 86593711 86593761 86593712 86593711 86593761 50 GGATTAGTAGTTTTCAAGGGTTTTTGTTTGTTTGTTTTGCTTTGTTTTTT ....x.xx.....xx::.x....................:.......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 32768985 NA +12804 chr4 + 190214555 119378064 119378063 119378235 172 TTGCAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAAGAAGACTTG---TGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATATGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGGCAAGT chr4 + 94230402 24945737 24945736 24945911 24945737 24945736 24945911 175 TTACAGGTGCTGCTTCCAGCAGCTGGTCTCTTGCAACTGCAGGATGTGAAAAGGACTTGCTGTGAATTTTTGGAATCCCAGCTTCATCCTGTCAACTGCTTGGGAATTCGTGCTTTTGCTGACATGCATGCATGCACGGATCTATTGAACAAGGCCAACACATATGCAGGCAAGT ..:.....:..x..:.................:..::.:...........:.:......---........................:..............:.....:..x...........:...........:..x..:..x:................x............. 59M3I113M 151/172 87.8% 175/94230402 0.0% 3/172 1.7% 94432327 NA +3556 chr4 + 190214555 119379884 119379883 119379963 80 AAGACA--TTATTTCTTTCTTTTTTTATGGTAGAGTAGTATTCCATCATATATATATATATACATACACACACACACACGTA chr4 + 94230402 41650551 41650550 41650628 41650551 41650550 41650628 78 AAGACAACTTATTTTTCACCTTGTTT----TAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTA ......--......:.:x.:..x...----...xx.x::...:...:.x.:...........:...:............... 6M2I18M4D52M 60/76 78.9% 78/94230402 0.0% 6/76 7.9% 77729333 NA +3597 chr4 + 190214555 119379952 119379951 119380043 92 CACACACACGTACGTATATACACATGTATATATGTACACACATGCATATACATATATGTCTACATACGTATATGTATGCGTGTATATATGTG chr4 + 94230402 22600181 22600180 22600272 22600181 22600180 22600272 92 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ....x.x.:x:.x.x.x.:......:.x:.:...:.x...........:.x.x......x..:x.::..:.:.:.....:..:.::..x... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 96779771 93434784 +3360 chr4 + 190214555 119380002 119380001 119380102 101 CATATATGTCTACATACGTATATGTA--TGCGTGTATATATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAACATTTT chr4 + 94230402 89812968 89812967 89813070 89812968 89812967 89813070 103 CATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTT ......x:.xx.:..::......x..--...x.xx...:.....:.x::x:x::..:..:...x:x...................:.x..x..x.x.x:.... 26M2I75M 68/101 67.3% 103/94230402 0.0% 2/101 2.0% 29567034 NA +3409 chr4 + 190214555 119380021 119380020 119380086 66 ATATGTATGCGTGTATATATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..::.....xx......:.:x..x.:x.:x:.:...........:.........::...:...... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 92054530 NA +3177 chr4 + 190214555 119391287 119391286 119391379 93 AAAGAGCCAGGCATGGTGGCATGTGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATAACTTTAACTCAGGAGGCGGAGGTTGCA chr4 + 94230402 76033186 76033185 76033276 76033186 76033185 76033276 91 AAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:::x.x:..::....--..::.x......:.......:...::........x.xx.x...xx....x...:...:..x:xx:..:..:. 19M2D72M 60/91 65.9% 91/94230402 0.0% 2/91 2.2% 43358101 NA +3379 chr4 + 190214555 119412409 119412408 119412491 83 CATAGTGGCAAGCACCTGTAGTCTCAGCCACGTGGGAGGTTGAGATGGGAGAATCACTTCAGCCTGGAAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x......::....:..x..::...:....x:xx.x...x.....x.:..::....x..x:.....:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 43379212 NA +3249 chr4 + 190214555 119416497 119416496 119416592 96 ACATGGTGGTATGCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGTGAGACAATCGATTTAGCCCAGGAGTTTGAGATCAGCCTGGACAACATAA chr4 + 94230402 76033196 76033195 76033284 76033196 76033195 76033284 89 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG-----CTGTAGAACATGA ...::.....--..:.x......:............:........x:xx.xx..x.:x..x.:.....:..:..x:.:-----...x.x.....:. 10M2D66M5D13M 64/89 71.9% 89/94230402 0.0% 7/89 7.9% 43383301 NA +3341 chr4 + 190214555 119429657 119429656 119429719 63 TGTAATTCCAGCTACTTGAGAGGCTGCAGCAGGAGAATCACTTGAGCCCTGGAGGTTGAGGCT chr4 + 94230402 76033211 76033210 76033273 76033211 76033210 76033273 63 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ....:..............:......x:x.xx.x...x.......:...x.:..x..x:.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 43396446 NA +3837 chr4 + 190214555 119434472 119434471 119434543 72 GCACCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........x:........x.xx.x.:.x::.....:.....:..x..x:.....:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 43401266 NA +3492 chr4 + 190214555 119451116 119451115 119451191 76 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCTGAAGTTG chr4 + 94230402 76033201 76033200 76033274 76033201 76033200 76033274 74 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ....::..:.--....:.:...........::........x.xx.x...x.:...........:..x:.x::.:.. 10M2D64M 54/74 73.0% 74/94230402 0.0% 2/74 2.7% 43417915 NA +3485 chr4 + 190214555 119451648 119451647 119451721 74 GTGCCCCTGTAATCCCAGCTACTCGGGAGCCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:.:.........:.::..x.....x.xx.x...x.:.........:.:..x.xx:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 43418444 NA +3018 chr4 + 190214555 119451767 119451766 119451829 63 AGGCTCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAACAGAAACAGAAAAAG chr4 + 94230402 54794468 54794467 54794530 54794468 54794467 54794530 63 AGGCTTTCTCACAGGATAAAAGAAAAAAAAAAAGGAAAAAAAATGAAGTACCACAAGAAAAGG .....:.x...x.::.x....:............:........x:..::.xx.xx......:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 64657299 NA +3271 chr4 + 190214555 119452551 119452550 119452644 94 CTCCATCTCAAAAACAAAACAAAACAAAACAAAAAACCACTAAAAAAAGACTCCATTTCAAAAACAAAACTAAAACCAAAAACACAACACAAAT chr4 + 94230402 6760476 6760475 6760553 6760476 6760475 6760553 78 CTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAA-------------CACGAAGAAAGC---AAGCAAAAAAACATCACCAGT ...:x.......................xx........x.:....-------------..x:..x...:.---..x......x...x...x.:. 45M13D12M3D21M 63/78 80.8% 78/94230402 0.0% 16/78 20.5% 112692075 77522480 +3085 chr4 + 190214555 119558777 119558776 119558846 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 43525580 NA +3219 chr4 + 190214555 119592451 119592450 119592497 47 CTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTGTGTTCT chr4 + 94230402 38033403 38033402 38033449 38033403 38033402 38033449 47 CTGCTTAAAAAAAACAAAAAAAAAAAAAAGTAGAAAAGCTGTTTCCT ...:..........x..............:x.:.........x.:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 81559048 NA +3274 chr4 + 190214555 119609033 119609032 119609104 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAACCCAGGAGGCTGAGCTTGGAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...xx:.:.........:..x:.x:.x:..x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 43575827 NA +3017 chr4 + 190214555 119650465 119650464 119650498 34 TTTCTTTTTGTTTGTTTGTTTGTTTTTTTAAGAA chr4 + 94230402 42400939 42400938 42400972 42400939 42400938 42400972 34 TTTTTTTTTGTTTGTTTGTTTGTTTTTTTAAGAA ...:.............................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 77249526 NA +3082 chr4 + 190214555 119681011 119681010 119681070 60 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTCGGACCCGGGA chr4 + 94230402 76033204 76033203 76033263 76033204 76033203 76033263 60 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ......x....:.:.........::::........x.xx.x...x.:..:.:....:.:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 43647807 NA +3017 chr4 + 190214555 119693439 119693438 119693491 53 AACTAGAATGTACCACTTTTTTTTTTTTTTTGTTAATGCTCCCTCTTTTCTTT chr4 + 94230402 73016431 73016430 73016483 73016431 73016430 73016483 53 AAATAGAATGTAATGCTTTTTTTTTTTTTTTGCTAATATTCAGTATTTACTTT ..x.........x::.................:....::..xx.x...x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 46677008 NA +3700 chr4 + 190214555 119715261 119715260 119715339 79 GTGGCACATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGGGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:............:........x.xx.x...x.:.........:.:..x:xx...:...:. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 43682060 NA +3012 chr4 + 190214555 119734337 119734336 119734401 65 CCATATTTCGGGGTGTTGGTTTCTTTTTTCTTTCTTTTTTTTTTGAGACAGAGTCTCAGTCGGGA chr4 + 94230402 71074301 71074300 71074365 71074301 71074300 71074365 65 CTACTTTTTAGGGTTTGGGGTTGTTTTTTCTTTTTCTTTTTTTTAAGTCATAATTTCAGATGGAA .:.:x...::....x.x..x..x..........:.:........:..x..x.:.:....x:..:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 48660036 NA +3023 chr4 + 190214555 119741162 119741161 119741262 101 AAAATAAAAATAAAAATGCGGTTTCAAAATATGCCTACAAATTAATACATTTGCTCATAAGAGTTCCTGGAAGAAAACAAAACAAAACAAAACAATACAAA chr4 + 94230402 22367399 22367398 22367499 22367399 22367398 22367499 101 AACATGAAAAGTTAAATGCATGCTGACACTCTGCAGAAGGATTAACAGATTTTCCTAAAATTATGCCTTTGGGAAAACAAAGCAAAACAAAACAACAAGAA ..x..:....xxx......:xx:.x.x.x.x...xx.x::.....:.x....x.::.x..xx:.x...xx::.........:.............:.x:.. 101M 65/101 64.4% 101/94230402 0.0% 0/101 0.0% 97373763 92840792 +3020 chr4 + 190214555 119748275 119748274 119748318 44 TTGTTGTTCATGTTTAAAAAACAAACAAACAAAAAACACTAATA chr4 + 94230402 62889911 62889910 62889954 62889911 62889910 62889954 44 TTACTGTTTTTATTTAAAAAACAAACAAACAAAAAACAACAATA ..::....:x.:..........................x:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 56858364 NA +3020 chr4 + 190214555 119759200 119759199 119759245 46 AAACAAAACCAAAAAAAAAAAAAAGAAAGAAAGAAAGGAAAAGAAA chr4 + 94230402 75300446 75300445 75300491 75300446 75300445 75300491 46 AAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...::::.................:.....:...:..::.:..... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 44458754 NA +3740 chr4 + 190214555 119759775 119759774 119759885 111 CAGCCGGCTTCTCCAGCTCAAGTTCTTCCTCTCCTCTTTCTCCTTTTCATTCCCTTTCCCTCTCTCCTTTATTTTCTTTTC-----TTCTCACACCCTTTTCTTCCTCTTTTTTCA chr4 + 94230402 22955473 22955472 22955587 22955473 22955472 22955587 115 CAGTCTGTGCCCCTACCTGAAGTT-TTCCAATCCTATTTCTCCTCATACCTACAACTCCCTCTCTTCTTTATGTTCTTTCCATTTTTTTTCCCCTCCTTTCCTTACCCTCATTTCA ...:.x.:x:.:.:.x..x.....-....xx....x........:x.xx:.x.xx:.........:......x......:.-----..:..x.x:.....:...x.:..:x..... 24M1D56M5I30M 77/110 70.0% 115/94230402 0.0% 6/110 5.5% 96804302 93410253 +3256 chr4 + 190214555 119803350 119803349 119803418 69 GGAAAGGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAGCTG chr4 + 94230402 62123643 62123642 62123711 62123643 62123642 62123711 69 GGAAGAAGGTTGTTTGTGCGTGTGTGTGTGTGTGCACATGAAAAGTGGGGAGGGAAGGAAAACAAGATG ....:::..x...x....:...............::::...:.::x:.:...:..::..:.:x...x.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 57679707 NA +3103 chr4 + 190214555 119807524 119807523 119807571 48 TATATATATATACACACACACACACACAGACACACACACACACACACA chr4 + 94230402 66743631 66743630 66743678 66743631 66743630 66743678 48 TATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACA ....x...x.....:x:....x...x...:.................. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 53063893 NA +3028 chr4 + 190214555 119809827 119809826 119809908 82 TCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x:::..........:...x....:.....:.xx..x:.xx.x.x:..x..x..x.....:.... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 84901653 NA +3433 chr4 + 190214555 119809830 119809829 119810007 178 TCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTT-------TTCTTCTTCTTCT------------------TCTTCTTCTTCTTCTTCTTCCT---------------------------GTTCTTCTTCTTCCTCTTC--TTCTTCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTT chr4 + 94230402 34908174 34908173 34908405 34908174 34908173 34908405 232 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGGTTACAAGTGGATTCTTCATCCACTGTAATAAGTCTATTGTTATTTTCTTCTAACTGTTCTTGCTGGGACTCACGTCTGTCATCAAACCCAGGTTCTTCTCTTATCTCTCCGTTCCTCCCAATGTGCTGCTCCTCTTGTTGTTGTCTTT ..x..x::.....xx...x::...........::..x....:.....:.xx..x:.xx.x.x...x..x..x.....:....xx.:x:-------......x..:x..------------------.:.......xx:.x.....x..---------------------------........::.x:....:.--.:..:..xx:x..:.x:.......x..x..x.:... 88M7I13M18I22M27I19M2I36M 120/178 67.4% 232/94230402 0.0% 54/178 30.3% 84901656 NA +3345 chr4 + 190214555 119809833 119809832 119809958 126 TCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTC-------TTCTTCTTCTTCT------------TCTTCTTCTTCTTCTTCCTGTTCTT chr4 + 94230402 34908174 34908173 34908318 34908174 34908173 34908318 145 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGGTTACAAGTGGATTCTTCATCCACTGTAATAAGTCTATTGTTATTTTCTTCTAACTGTTCTT ..x..x::.....xx:..x::.........:.:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:....xx..x.-------......x..:x..------------.:x.:x.:.......xx........ 88M7I13M12I25M 86/126 68.3% 145/94230402 0.0% 19/126 15.1% 84901659 NA +3001 chr4 + 190214555 119809836 119809835 119809917 82 TCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::....:xx...x::......:....:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 84901662 NA +3232 chr4 + 190214555 119809836 119809835 119809986 151 TCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTT-------CTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTGTTCTTCTTCTTCCTCTTCTTCTTCCTTCTTGTT chr4 + 94230402 64726428 64726427 64726585 64726428 64726427 64726585 158 TTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT .:..:..:.x:..::.x...:xxx.:::.:xx:..:.:x::..x:.....x.xx.:..-------:....x...x..x.:x..:x.x..::x..::.....:.:..x.xxxx:..:..:.....x.:::x......:.....:.:.....:....x.. 58M7I93M 87/151 57.6% 158/94230402 0.0% 7/151 4.6% 55083408 NA +3437 chr4 + 190214555 119809952 119809951 119810032 81 TGTTCTTCTTCTTCC---TCTTCTTCT----TCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTGCAGTGTCTTTGTGT chr4 + 94230402 72471343 72471342 72471430 72471343 72471342 72471430 88 TATTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTAT .:..:..::....x.---.:.......----.:...x..xx........:.....:....:........:..x..x.::.....x.:. 15M3I9M4I57M 61/81 75.3% 88/94230402 0.0% 7/81 8.6% 47338609 NA +3080 chr4 + 190214555 119809964 119809963 119810015 52 TCCTCTTCTTCTTCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907959 56907958 56908010 56907959 56907958 56908010 52 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ...x.:::...:....:.x.x....::....:..............:..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 62902005 NA +3197 chr4 + 190214555 119809969 119809968 119810016 48 TTCTTCTTCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507636 80507635 80507683 80507636 80507635 80507683 48 TTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT ....x......::...:.x.....:............x.:........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 39302333 NA +3064 chr4 + 190214555 119809974 119809973 119810021 48 CTTCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTGCAG chr4 + 94230402 44980312 44980311 44980359 44980312 44980311 44980359 48 CTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAG .......:..x.......x.:.:..........:.........x::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 74829662 NA +3268 chr4 + 190214555 119833247 119833246 119833307 61 AGAAAAAAGAAAGAAGAAAAAGAAAATGAAAAAAAGAAAGGAAGTAGTAGAAAATGCCTTT chr4 + 94230402 17164211 17164210 17164271 17164211 17164210 17164271 61 AGTAAAAAGAAAAAAGAAAAAGAAATTAAAAAGAAGGAGTGAAGTAAATGACAACATCTTT ..x.........:............x.:....:...:.:x......:xx..x..:::.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 102669036 87545519 +3204 chr4 + 190214555 119842521 119842520 119842611 91 CAACCCGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATTGCTTAACATTAAATTTGCTTT chr4 + 94230402 11643937 11643936 11644020 11643937 11643936 11644020 84 CAAACTGAGTGTGAGAGCAAATATC-------AAAGAAGAGAGAAAAACAAAAATAAAAAAAAAACTGTTCATTAACATCAGAGCTGTTTT ...x.:.:.:.xx.......:xx..-------...:..:.:.:.....x.....x..........:::..xx.......:.:.x:..:... 25M7D59M 59/84 70.2% 84/94230402 0.0% 7/84 8.3% 108198584 82015971 +3099 chr4 + 190214555 119909854 119909853 119909932 79 TTGTGGAATCTTTGGATATATACATACATATATATACACACATATATACATATATGGATATATATACACACATATATAT chr4 + 94230402 70600695 70600694 70600773 70600695 70600694 70600773 79 TTGCAGACTTCTCAGCTGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGT ...::..x.::.::.x.:.:.:.:..x:.x:..:.....x:...:..........:..:..::.:.....x:.:.:.:. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 49309159 NA +3032 chr4 + 190214555 119911919 119911918 119911965 47 TCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTACTTGTAAGTTCAGG chr4 + 94230402 8813869 8813868 8813915 8813869 8813868 8813915 47 TTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAACATTTAATTCAGG .:...............:...............x:xx.x.:...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 111098050 79116505 +3129 chr4 + 190214555 119922509 119922508 119922558 50 TACATATGTGTGCACACACACACACACACACACACACATACACACATTCT chr4 + 94230402 68837098 68837097 68837147 68837098 68837097 68837147 50 TGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTT .:.:.:......:::.......x.:...:...:......:........:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 51085411 NA +3249 chr4 + 190214555 119941492 119941491 119941559 68 GATTTCTCACCCCTCCT---------------CCTCTTTCTCCTCCTCCTCCTCCCTCTTTTCTTCCTTCTTCCTCTTTCCCT chr4 + 94230402 68929816 68929815 68929898 68929816 68929815 68929898 83 GATGTTTCATCCCTTCTTCCACGGGGTTATTTCCCATTTACCCCCTCCCTCCCCCCCCTTTTTTTTCTTCTTCCTCTTCCTCT ...x.:...:....:..---------------..:x...x:..:.::.....:...:.....:..:............:.:.. 17M15I51M 51/68 75.0% 83/94230402 0.0% 15/68 22.1% 51011676 NA +3184 chr4 + 190214555 119948678 119948677 119948731 54 TTGACTTATTTGTTTTTTGTTTGTTTGTTTGTTTTGTTTTGGTTTTTTTTTTTA chr4 + 94230402 68489670 68489669 68489723 68489670 68489669 68489723 54 TTGACTTTTTTTTTTTTTGGTTCTTTGTTTGTTTGGCTTTGCTTTTGGTTTTTA .......x...x.......x..x...........x.:....x....xx...... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 51459008 NA +3071 chr4 + 190214555 119948685 119948684 119948723 39 ATTTGTTTTTTGTTTGTTTGTTTGTTTTGTTTTGGTTTT chr4 + 94230402 55690045 55690044 55690083 55690045 55690044 55690083 39 ATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTT ....x...........:.................x.... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 64258640 NA +3354 chr4 + 190214555 119948689 119948688 119948745 57 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTGGTTTTTTTTTTTAT-TTTTTTTATTATA chr4 + 94230402 80057861 80057860 80057918 80057861 80057860 80057918 58 GTTTTTTGTTTGTTTGTTTGTTTTATTATTATTATTTTCTTCAGATTTTTTTATTGTA ........................:..x.x:..x....:..:.x-..........:.. 44M1I13M 48/57 84.2% 58/94230402 0.0% 1/57 1.8% 39890828 NA +3163 chr4 + 190214555 119948689 119948688 119948727 39 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTGGTTTTTTTT chr4 + 94230402 56840383 56840382 56840421 56840383 56840382 56840421 39 GTTTTTTGTTTGTTTGTTTGTTTTGTTTCTGTTTTTCTT ............................:x......:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 63108306 NA +3105 chr4 + 190214555 119970023 119970022 119970106 84 TCATTTTTAAATCAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTATTGAGTTGTTTGAGTACCT----TATGTATTCTGGT chr4 + 94230402 10391286 10391285 10391373 10391286 10391285 10391373 88 TCAGTATTAAATCAATCTTTTTTCTTTTTTTTTTTTTCTCTGTGCTTTGCAAAAGGGTTGATTAATTCTTTCCACTGCATATTCAGGT ...x.x........:x:......:.............:.:.x.x:.....x.xx.:....x..:.x.x::.----.:::.....x... 71M4I13M 59/84 70.2% 88/94230402 0.0% 4/84 4.8% 109578737 80635818 +3548 chr4 + 190214555 120009123 120009122 120009207 85 CATGGTGGCTCATGCCTGTAATCCCAGCTACTCAAAAGGCTGAGTCAGGAGAATTGCTTGAGCCCAGTAGTTAGAGTCTGCAGGA chr4 + 94230402 76033197 76033196 76033279 76033197 76033196 76033279 83 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA ..::....:x..:.--....:.:.........::..........:.xx.x...x::.....:.....x..:.xx:.x...:..:. 14M2D69M 58/83 69.9% 83/94230402 0.0% 2/83 2.4% 43975926 NA +3162 chr4 + 190214555 120013023 120013022 120013101 79 ATATATACATATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAAAATAGTTTCTTTATC chr4 + 94230402 6857610 6857609 6857673 6857610 6857609 6857673 64 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG---------------GAAATAATTTTTTTCTC ........:..::.::.....x:.........x...........x..---------------:.....:...:...x.. 47M15D17M 51/64 79.7% 64/94230402 0.0% 15/64 23.4% 113155413 77059142 +3002 chr4 + 190214555 120018361 120018360 120018407 47 AAAAAAAAACAAAACAAAACATTTTTCTTCCCAATTAGACCATAAGT chr4 + 94230402 92760809 92760808 92760855 92760809 92760808 92760855 47 AAAAAAAAACAAAACAAAACATCTTTTTCCCCCCTCAAAACATGAGT ......................:...:.:...xx.:.:.x...:... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 27257552 NA +3193 chr4 + 190214555 120020167 120020166 120020252 86 AAAACCACTTGCTGTCTTCAAGACAAGATTACATTCTTCTTTTTTATTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGC chr4 + 94230402 55680046 55680045 55680124 55680046 55680045 55680124 79 AAAACAACTGGCAATTTTTAAT------TCACAT-CTACTTTTCTATTCCCTCTTTTTTTTTTTTTTTTTTGCAACATCATGTTGC .....x...x..x:.:..:..x------.:....-..x.....:.....::.:...................x:...xx:.x.... 22M6D6M1D51M 60/79 75.9% 79/94230402 0.0% 7/79 8.9% 64340121 NA +3115 chr4 + 190214555 120020175 120020174 120020230 56 TTGCTGTCTTCAAGACAAGATTACATTCTTCTTTTTTATTCTTTTTTTTTTTTTTT chr4 + 94230402 48553569 48553568 48553624 48553569 48553568 48553624 56 TTGATGTATTGAAAAAAATATTACTTTTTTCTGTCTGATTCTTTTTTTTTTTTTTT ...x...x..x..:.x..x.....x..:....x.:.x................... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 71466606 NA +3205 chr4 + 190214555 120022111 120022110 120022198 88 ATACAAACACATGTGTGTATGTGTGTTCATGTACATATACACATATATAGTTGAATGTAT----ATAAATTCAAAAATCAAAGTTGGTTTTT chr4 + 94230402 55694461 55694460 55694549 55694461 55694460 55694549 89 ATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATATTGTTGAGAAAATTGCCGTAAA---ATAGCTCAAGGTTTGTTTTT .....x..................:...x::.::.::.::::......x.....:x:x..----:....---.x.:x....:...x...... 60M4I5M3D20M 61/85 71.8% 89/94230402 0.0% 7/85 8.2% 64327650 NA +3154 chr4 + 190214555 120075685 120075684 120075756 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGCTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...xx:.x.......:.:....xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 44042479 NA +3114 chr4 + 190214555 120108170 120108169 120108238 69 ACTCTGATAGTAGTTTCTTTTGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780445 52780444 52780510 52780445 52780444 52780510 66 ACTCTAACATCACTTGCT---GCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.:.x:.x..x..---....:.....:....:......:.:x.xx.x..:.............. 18M3D48M 50/66 75.8% 66/94230402 0.0% 3/66 4.5% 67327725 NA +3322 chr4 + 190214555 120154148 120154147 120154219 72 GTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........::.:........x.xx.x...x..........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 44120942 NA +3004 chr4 + 190214555 120166739 120166738 120166773 35 AAACATATATATATATATATACACACACACACACA chr4 + 94230402 41650594 41650593 41650628 41650594 41650593 41650628 35 AAACATATATATATATATATACACACACACACGTA ................................::. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 78516145 NA +3203 chr4 + 190214555 120169353 120169352 120169418 66 TCTGCTCCTTGTTTGAACCTTTCTCATGGCAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 17260871 17260870 17260936 17260871 17260870 17260936 66 TCTCCTCTTGTTTTGCAGATCTCTCATGCCAGCTTCTTTTTTCTTTTTTTTTTTTCCCCTTTTCTG ...x...:.xx....x.xx.:.......x...:x.:......:............::::....:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 102908482 87306073 +3248 chr4 + 190214555 120187722 120187721 120187778 57 ATGCACATC---CTCTTCCCTCCATCTAGAATGCCCTGCACCCTATTTCCAGATGTCTAG chr4 + 94230402 24549410 24549409 24549469 24549410 24549409 24549469 60 ATGCACATTTCTCTCTTCTCTTCATGTAGAATGCTCTACATCTTATTTCCTGATTTTTAG ........:---......:..:...x........:..:..:.:.......x...x.:... 9M3I48M 46/57 80.7% 60/94230402 0.0% 3/57 5.3% 95638312 NA +16910 chr4 + 190214555 120194312 120194311 120194874 563 CTGATTGATTGGGGATGACATGTCAAGCTTTGGGCTGGAGATTCAGTGATTGCCTCTTGCCTAGGAGGTTTAAATTTTCATGTCTCCCTCTGAGCTGCAGCTA-ACATGTAACAAATTTGCCTGGTTAGATAACATTA--------TTGCCTACAACTCTGGGCATCATACATGACTTGCCCATCCTGTAGTAAGGATAGGCATAGCCAGGCCTGGTGTGTGAAGCTGTTGATAGATGAATAATCCTCCATACTGCAGAAGCCAGAGCAAAAAAGCTAATCATGTATGGCAGTGAGCATGAAGTAACCTGCCTTCCCTCC-TAAATAAACAGATGGAAAGAGTTTGCAGT--TCATTTCTTTCCAAGGTAACAAATTATTTTATTTCTATGTTTTACAGTAACAGAACCAAAAGTTCTTCTCTTTGGGGAAATTTTATTTTTCTTTAATTATTCCATGCAAACAAGAGA--------------CCTGAGTCTTCTGGGGACAGATGCAGAGAAGTCAAAATTAATTAGTTTTTCTTATGATACACTGCATTTGGGTAAAATATCACTGTGGGGGCACAATGACAGATTA chr4 + 94230402 56029248 56029247 56029824 56029248 56029247 56029824 577 CTGATTAATTGGGAATGACATTCTGGGCCTAGTGTTGGTGACCCAATGATTGGGAATTGCCCTGGAGCTTTAAAGCCTCATGTCCTTCCTAAGGCTGCAGTCACACATAGAACAAAACCGCCTAGTTAAATTACATTAGCCATCTACTGTTTACAAATTTCAGGATCACGCATGGTCTGCCCATTGTTTGGCACAGATAAACACAATCAGCTCTGGCATGTGAAGCTGCTGACAGATTGCCAACCACTGGTACAGATGGTGGCAGCATGAGAGTGCTAATTACCGATGACATTAATGATGAGGTAACCTGTCTCTCTTCAGCTAATAAACAGATGGAATGTGTTTCTTATTATCTTTTTTTTTCCAGATAACAAATTGATCAGTTTTAATTGCAGAGAGCAAGAAAGCCAAATTATATGTTCTTCGGAGAAA-TTTGTTTTCTGCTAATTGCTCTAAACAATCAATGGAAGAATTACAACTGGCATTATCCCACTGGGAACAGGAGCAGAGAAGTCAAAGTCAATTAG--CTTCCTACAGTACGGTGCACTCAGATGGAA---------AGAGTCATTATAACAGACTA ......:......:.......x::::..:.x.x.:...x..::..:......xxxx.....:x....x......x::.......:::.::x::.......::.-....:x......x::....:....:..x......--------:..::.....x.:.x:.x....::....:::.......:x.x.:.:.x:....::..:.::...x:....::..........:...:....x:x:..:.x::x:...x.xx.:x.x...x:::.:.:x......:.:xx...:..x.:.xx....:........:..::.:..x-:x...............x.x....x:x:.--..x...:...:.x..:.........:x.:x:...:x..xx:xx.x..:..x.:.:.....xxx.x.x:....:..:....-...:....::x:.....::..:.x:...x...x:..--------------.x.x.x:.:x.....:....:x..............:.:......--:...:..:::...:x....:.::.:.::..---------:.:.x..:x..:.....:.. 103M1I34M8I174M1I29M2I80M1D36M14I45M2D30M9D20M 357/551 64.8% 577/94230402 0.0% 38/551 6.9% 64165064 NA +3099 chr4 + 190214555 120218708 120218707 120218750 43 GTTTTTTGTTTTTTGGGTTTTTTTTTTTGTTTGTTTTTTTAAT chr4 + 94230402 40001351 40001350 40001393 40001351 40001350 40001393 43 GTTTCTTGCTTTTTGTTTTTTTTTGTTTGTTTGTTTTTTTAAT ....:...:......xx.......x.................. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 80217357 NA +3195 chr4 + 190214555 120224592 120224591 120224654 63 TTGCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAT chr4 + 94230402 4618344 4618343 4618406 4618344 4618343 4618406 63 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATAT ..x..:....x:x.::.x.......::..............::x...::......x.x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 115606248 74608307 +3123 chr4 + 190214555 120224596 120224595 120224657 62 TCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTAT chr4 + 94230402 4618350 4618349 4618411 4618350 4618349 4618411 62 TCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTAT ...:x.x.::.x.......::..............x:x...::......x.x......x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 115606246 74608309 +3054 chr4 + 190214555 120224600 120224599 120224684 85 TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTATTTTTTAATTTTTTTTTTTAGATGGAGT chr4 + 94230402 26578266 26578265 26578347 26578266 26578265 26578347 82 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCC---TCTGCTTTTCTTGGTGCAGT .....................:.:.:.:.:.:x:...:...:.x.:..::.:.:xx...:::---.:.x:....:.x.:..x... 62M3D20M 54/82 65.9% 82/94230402 0.0% 3/82 3.7% 93646334 NA +3126 chr4 + 190214555 120224606 120224605 120224663 58 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATAT---------ATATATATATATTATTTTTTA chr4 + 94230402 4618362 4618361 4618428 4618362 4618361 4618428 67 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTA .......::..............x:....::......---------:....x.........x.x... 37M9I21M 48/58 82.8% 67/94230402 0.0% 9/58 15.5% 115606244 74608311 +3159 chr4 + 190214555 120224606 120224605 120224660 55 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATTATTTT chr4 + 94230402 81889436 81889435 81889490 81889436 81889435 81889490 55 TCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACATTAGTCT ..:......:.:x......:......:......x.x...:...:..:....x.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 38335170 NA +3219 chr4 + 190214555 120234256 120234255 120234337 82 GCCAG-CTTACCTAAACCCTCATTAACCCTGGTTAGCCATTGTTAAAAAAAAAACAAAAAACAAAAAACAAACAAACAAACAA chr4 + 94230402 25314670 25314669 25314752 25314670 25314669 25314752 83 GCCAGTCATACAAAAGTACTCAAATACCTCAATTAACAGTAATTAAAACAAATATAAAAAACAAACAACAAACAAACAAAAAA .....-.x...xx..::x....xxx...::::...:.x:.x:......x...x.:..........x..............x.. 5M1I77M 59/82 72.0% 83/94230402 0.0% 1/82 1.2% 94919586 NA +3078 chr4 + 190214555 120234314 120234313 120234401 88 AACAAAAAACAAACAAACAAACAAAAACACCTCTATCCATTGTTAAGTACAATAATAATATTGGTGGTGAAACAT-TTTCATATTACAT chr4 + 94230402 77919160 77919159 77919243 77919160 77919159 77919243 84 AGCAAAAAACAAACAAACAAACAAAAAAAACCCAACAAATTGTGCAGAAAGATAATAA-----GCaattaaatttattttaaattaCAT .:.........................x.x.:.x.:xx.....xx..x.x:.......-----.:::.x...:x.-...:.x....... 58M5D12M1I13M 62/83 74.7% 84/94230402 0.0% 6/83 7.2% 42315154 NA +3569 chr4 + 190214555 120259763 120259762 120259841 79 GTGGTGCATGCATGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:.........::.:........x.xx.x...x::...........:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 44226562 NA +3085 chr4 + 190214555 120272395 120272394 120272455 61 TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGTATGTGTATG chr4 + 94230402 85834540 85834539 85834600 85834540 85834539 85834600 61 TTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG ......x.................:.xx:...:x.::.::..:....x:.::....x.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 34437855 NA +3356 chr4 + 190214555 120273371 120273370 120273465 95 TATAACCACAAAGATAATTAAAGGATATATATATATATACACACACACACAGACATATATATATATACATAT--GTGTGTGTATATGTATATGTATA chr4 + 94230402 22600173 22600172 22600268 22600173 22600172 22600268 96 TGCAACAGCACAGA-AATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .::...x:..x...-....x.:.:.x.:.:.:....x:...::..x.....x:....:.x.x....::....--.............:..:::::.. 14M1D57M2I23M 64/94 68.1% 96/94230402 0.0% 3/94 3.2% 97673198 92541357 +3286 chr4 + 190214555 120281308 120281307 120281367 60 AAAAAAAAAAAAAAAAAAAAGACTGAAATGAAAATACTTTCTTAAATTCCGTTGTGTGAA chr4 + 94230402 26762649 26762648 26762708 26762649 26762648 26762708 60 AAAAAAAAAAGAAAAAAAAAGATTAAGATAAAAAGAATTTTTTAGGCTTCATTTTGCAAA ..........:...........:.:.:..:....x.x...:...:::.:.:..x..::.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 93518659 NA +3032 chr4 + 190214555 120314151 120314150 120314221 71 TCAATGCTTTTGTTTTTTCTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTC chr4 + 94230402 77533338 77533337 77533399 77533338 77533337 77533399 62 TCTATCTTTTGGTTTATTCTTTTTTTTTTTCCCTTTCTTTGCTCCTTTTTCTTTG---------CTTGCTC ..x..x:...x....x.......:......:.:.......x:.::.....:....---------....... 55M9D7M 49/62 79.0% 62/94230402 0.0% 9/62 14.5% 42780813 NA +3262 chr4 + 190214555 120326358 120326357 120326454 97 AAGAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAG-----AAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCA chr4 + 94230402 61683536 61683535 61683637 61683536 61683535 61683637 102 AAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAAAAGTACA ..:..:...::...x...:..:.x.x:.:............x......:...:.:.x.:.x.-----x.x..:....x.xx..:..:x.:.::....:x:.. 62M5I35M 64/97 66.0% 102/94230402 0.0% 5/97 5.2% 58642822 NA +3674 chr4 + 190214555 120326375 120326374 120326487 113 AGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCA----AGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAG chr4 + 94230402 70762130 70762129 70762246 70762130 70762129 70762246 117 AGGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGAAGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAG ..:.:.....:x..x:........x......:x:..::.x.:x...:.xxxx.....x.:......:.x::.xx....x.----.x..x..x:........:..:....:.:..:.. 80M4I33M 75/113 66.4% 117/94230402 0.0% 4/113 3.5% 49564245 NA +3611 chr4 + 190214555 120326381 120326380 120326474 94 GGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCAAGCAAGCAAAAGAAAAGAAA chr4 + 94230402 58935721 58935720 58935814 58935721 58935720 58935814 94 GGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ....x..:.::..:.x.:x:.xx..:....:.x::.:..:..:....:x......:x....:.....:...xx.x.....x:...:.:.:.... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 61390660 NA +3162 chr4 + 190214555 120326426 120326425 120326508 83 AAGAAAGAAAAGAAAGAAAG-------AAAAAAGCAAGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAGAAGAAAAAAGAAGGAAGGAAT chr4 + 94230402 2058571 2058570 2058660 2058571 2058570 2058660 90 AGAAAGGAGAAGGGAGGGAATCTGTTCAGAGCAGCAAGCAAACAGAGGAAAAGAATCAGAGGAAAAAAGCAGCAGAAGGGAGGTAGGGAT .::..:..:...::..::.:-------.:.:x.........:..:.:........xx.:.:..:..:..x..x.:..:.:...x...:.. 20M7I63M 55/83 66.3% 90/94230402 0.0% 7/83 8.4% 118267855 71946700 +3074 chr4 + 190214555 120326695 120326694 120326900 206 TGACTTGATTTTTTTTTCTTCTTCTGAAGCTTTTAGGATGCACTTCATATTTTCAGTATTCTAACATTTCACAGTGATAGGCTTTGATGTAATGTATTTTTAC--------CTCTGCTTTATTGA-------GTCTTTGGTAAGCTTTTTAAAACTAGAAGTATATATGTTTTTCATTTTGTTAATCTTTTTTCTAATA----ATTTTCTCTCCAATATTTTTTC chr4 + 94230402 72975493 72975492 72975713 72975493 72975492 72975713 221 TGAATTTAGTTTTTTTTTTTCTTCTTAAGCTTTTAGCAGCTTTTTTTTTTTTTTAATAATCTCATTTTTCTTTTAAGTATGCTTTGTTTTAA---ATACGTACGAGCAAGTCTCTGCCTTTCAGATGCTGATATTTTTCTTGATTCTTCTCAAAGTACCAGCATATAATCTTTGGGATGTACT-TCCTTGTTTCTTGTGGTGTATTATCTTTCCAGCGTTAATTC ...x..x.x........:.......x..........x.xx:x:..:x.x....:.:..x...x.:x....x:xxx::..x......x.x...---..x:x...--------......:..x:x..-------:.:...xx.:.x::..:.x...x..xx..:.....xx:...xx:x.x.::.-x:...x.....x:.:----...x...:....:::..xx... 92M3D8M8I14M7I51M1D15M4I22M 128/202 63.4% 221/94230402 0.0% 23/202 11.4% 47351202 NA +3022 chr4 + 190214555 120378485 120378484 120378527 43 AAAGAAACAAAAACAAGAAAACAAACAAACAAAAAACCCAAAC chr4 + 94230402 85213453 85213452 85213495 85213453 85213452 85213495 43 AGGGAAACAAAACCACAAAAACAAACAAACAAAAAACCCACAC .::.........x..x:.......................x.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 35165032 NA +3512 chr4 + 190214555 120380951 120380950 120381041 91 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAATCCAGGAGGCAGAGGTTGCAGTAAGCCGAGATGGTGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::.x....:.:...........::........x.xx.x...x.:......:....:..x:xx:..:..:..------:.x...:..... 73M6D12M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% 44347746 NA +3075 chr4 + 190214555 120381998 120381997 120382055 58 AACATGGGGACAAAGAAAAACATTTCTTACTATCTTAATTCCAGGAAAGATACCTGTA chr4 + 94230402 67871976 67871975 67872033 67871976 67871975 67872033 58 AATAGAGGGACAAACAGAAAGGGTTCTTTCCATCAGAATTCCAGGAAAGGTACTTGTA ..:.x:........x.:...x:x.....x.:...xx.............:...:.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 52510022 NA +3003 chr4 + 190214555 120446168 120446167 120446211 44 AGTCATATAGTTGGGTCTTGTTTTTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 29689836 29689835 29689879 29689836 29689835 29689879 44 AATCTTAGTGTTGGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTT .:..x..xx.......:..x........................ 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 90756332 NA +3221 chr4 + 190214555 120446172 120446171 120446225 54 ATATAGTTGGGTCTTGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTAATTTGT chr4 + 94230402 23572645 23572644 23572696 23572645 23572644 23572696 52 ATATAATTTAACCTTCTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTT--TTTGT .....:..x:::...x.x.............................--..... 47M2D5M 45/52 86.5% 52/94230402 0.0% 2/52 3.8% 96873527 93341028 +3099 chr4 + 190214555 120457256 120457255 120457345 90 TTTTCTCTGATACT-----AATACCTTTAGAGGAGATATTTTCTCAATTAGAATATGGTTTACAGAAAAAAGGGCAATTAAATTGTTACTGATTT chr4 + 94230402 79291342 79291341 79291433 79291342 79291341 79291433 92 TTTTCATCGATGCTGCTTAAATA---TTGGAAGTTACATTTTTTCCCTTATAATATAGATTGCTATAAGAAATGCAATTGAATTGTTACTTATTT .....x::...:..-----....---..:..:.xx.:.....:..xx...x.....:.x..:.x:x..:..:x......:..........x.... 14M5I4M3D69M 63/87 72.4% 92/94230402 0.0% 8/87 9.2% 41165914 NA +3117 chr4 + 190214555 120471897 120471896 120471968 72 GCGCCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:........x..::........x.xx.x...x::......:..:.:..x:xx...:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 44438691 NA +3319 chr4 + 190214555 120500229 120500228 120500444 216 TTCTAG---TAGTATTTTTGTGAATTCCTTGGGAGTTTCACATA----TAGGATCATGCTGTCTATAAATAGAGTTTTTTTTCTTTCCAAACT----ATTTGTCTATAGTTTTCTCT-TTCTTTATACTTTT-----TTTTTCTCTTTCTTTTCTTTTCT-TTCTTTCTTTCTTTCTTTCTT----TCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTCTTT chr4 + 94230402 64726361 64726360 64726583 64726361 64726360 64726583 223 TTCTAGCCCTTGTACTTGCACGACTACTTGTGGGGCTTAAGACAAGAGTATAGACATGCAGCCTACA-------TTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTC--------TCTTTTCCTTCCCTCTTT ......---.x...:..x:::..x.x.:.xx..:.:..x.x.:.----..x::x.....x.:...:.-------..:..:...x.:.:xx:..----....x::x..xx...x....-...:.::..x....-----::.....x:..x..x..x...x.-...:x.:.:....:....:x.----.:...:....:.:.:..x:.......--------...........::..... 6M3I35M4I19M7D19M4I20M1I14M5I23M1I21M4I26M8D18M 135/201 67.2% 223/94230402 0.0% 37/201 18.4% 55773868 NA +3955 chr4 + 190214555 120500289 120500288 120500430 142 AATAGAGTTTTTTTTCTTTCCAAA--------CTATTTGTCTATAGTTTTCTCTTTCTTTAT------ACTTTTTT-TTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--------------------TCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176238 50176237 50176414 50176238 50176237 50176414 177 AAGAAAGGTTTGTTTCTGGCAAGATGGATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ..x.:..x...x.....xx.x.:.--------..:.:.xx..::xx.::.:....:......------......x:-..x:.......x......x:x...x..:..x::.............--------------------....x::..:..............:.:.x..... 24M8I30M6I8M1I46M20I34M 102/142 71.8% 177/94230402 0.0% 35/142 24.6% 70324051 NA +3381 chr4 + 190214555 120500311 120500310 120500402 92 AACTATTTGTCTA--------------TAGTTTTCTCTTTCTTTATACTTTTTTTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 76738103 76738102 76738208 76738103 76738102 76738208 106 AACTATTCTTCTACATCTCAGCAATTTTAGTTTGCTCTTACTTTTTGCATTTTTTTCCTGATTCCCATGTTCTCTTTTTCCCTAACTCTTTTTCTTTCATGCATTC .......:x....--------------......x.....x....x.:.x.......:..xx...::x.x..:.....:.::..xx..:.:........x.x.x... 13M14I79M 67/92 72.8% 106/94230402 0.0% 14/92 15.2% 43762208 NA +3599 chr4 + 190214555 120500335 120500334 120500450 116 TTCTTTATACTTTTTTTTTCTCTTTCTTTTC--TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCT-----TTCTCTTTCTTTCTTTTCCTTCTTTCTTTCCTTAT chr4 + 94230402 82976631 82976630 82976753 82976631 82976630 82976753 123 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCAT ....x.x.:::....x......:.x......--.:.x....:.x.x.xx..:..x.:::.:..:...:::...:..:..:.x.-----.:.:....x..x:.:.......x..::...:.:.. 31M2I50M5I35M 76/116 65.5% 123/94230402 0.0% 7/116 6.0% 37523704 NA +3638 chr4 + 190214555 120500337 120500336 120500459 123 CTTTATACTTTTTTTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTCTTTCCTTATTTCCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ......x.:.:.::....:xx.x:...:::...:....:.:x..::.:.x....xx.....x.:.:xxx::.:.x:.:....x.xx.......:.:..:.....::..:...x:..::.x.:. 123M 73/123 59.3% 123/94230402 0.0% 0/123 0.0% 56803220 NA +3513 chr4 + 190214555 120500343 120500342 120500463 121 ACTTTTTTTTTCTCTTTCT---TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTCTTTCCTTATTTCCTTTCTTTCT chr4 + 94230402 63697116 63697115 63697239 63697116 63697115 63697239 124 ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCA--CAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .....x..::....:..::---.x.:..:.....:....:.:x..::.:.x....xx.....--...xxx:....x....:..x--.xx.....::..:.::.....:...x:.......:.x.:. 19M3I40M2I20M2D40M 80/119 67.2% 124/94230402 0.0% 7/119 5.9% 56803227 NA +3215 chr4 + 190214555 120500357 120500356 120500451 95 TTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTCTTTCCTTATT chr4 + 94230402 63697141 63697140 63697235 63697141 63697140 63697235 95 TTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .....:..:.....:.:x..::.:.x....xx.....x.:.:xxx.:.:.x::.....x:xx.......:..:::..:..::..::......x.. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 56803216 NA +3068 chr4 + 190214555 120500360 120500359 120500441 82 CTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTC chr4 + 94230402 39929910 39929909 39929991 39929910 39929909 39929991 82 CTTTTCTTCTGTTTTGTTTTGGGTTGGTTTTTTTTTTTTTTTTGGCTTCCTTTCCTCTCCATGTCTTTCTCCCTCCCTTTTC ........:.x...:x..:.xxx..xx...:...:...:...:xx...:....:..:..:x.x.......::::.:::.... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 80570450 NA +3442 chr4 + 190214555 120500365 120500364 120500476 112 CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTC--TCTTTCTTT-----CTTTTCCTTCTTTCTTTCCTTATTTCCTTTCTTTCTTTCTTTCATTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x:.::::.:.....:xx:x..:.:.....:....:..x.....:.x....--.....x.:.-----....x.:..:.:x.xx..:..x.:...::.....::..::...x...:. 54M2I9M5I49M 73/112 65.2% 119/94230402 0.0% 7/112 6.2% 56803248 NA +3070 chr4 + 190214555 120533112 120533111 120533181 70 GGAGGGTGTATGTGTCCAGGAATGTATCCATGTCTTCCAGATTTTCTAGTTTATTTGTGTAGAGGTGTTA chr4 + 94230402 77846764 77846763 77846833 77846764 77846763 77846833 70 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATTA .....:.x.:.:..:...:...:......x.x..........x.x::..:.x:...::xx.x....:... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 42686348 NA +3089 chr4 + 190214555 120546244 120546243 120546282 39 AATATATATATATATATATATATACACACACACACACAC chr4 + 94230402 85078509 85078508 85078547 85078509 85078508 85078547 39 AATATATACAGATATCTATATATACACACACACACACAC ........:.x....x....................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 35467735 NA +3036 chr4 + 190214555 120546248 120546247 120546287 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 116137166 74077389 +3316 chr4 + 190214555 120546261 120546260 120546351 91 ATATATACACACACACACACACACACACACACACACACACACACACACACAGAATTCAGCCTGATGCACTATTTAATATTAACTTTTAACA chr4 + 94230402 46140856 46140855 46140934 46140856 46140855 46140934 79 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAA---GGTGC---------TGTTGATTTTTGACA .......:........x.x....:........::::.:.:...x..x:......x...:---.:...---------.:..:.:....:... 59M3D5M9D15M 59/79 74.7% 79/94230402 0.0% 12/79 15.2% 74405405 NA +3106 chr4 + 190214555 120551736 120551735 120551805 70 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTGTTGTT chr4 + 94230402 58577649 58577648 58577718 58577649 58577648 58577718 70 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT .....:...:.::.:x..x.x:....x...x...:.x.x.....:...:....:....:.x.:....x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 61974087 NA +3140 chr4 + 190214555 120552954 120552953 120553021 68 CGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:......--...x......:...........::........x.xx.x...xx:.x......::.:.. 8M2D58M 50/66 75.8% 66/94230402 0.0% 2/66 3.0% 44519755 NA +21140 chr4 + 190214555 120565649 120565648 120566401 753 AATATCATTTACTCCATCATCTTTTTTATGGGAATGAGATATAATTTTGACAATACAGGTGCTCCTGTGAATGAGTCTGCCCAAAGGTGATGAGAATCTTCCAACCAA---GTTTGTCAAGAGAAATACTATTTCAATAT-TAGTATGAATCAATTAAAGTTCC--TAATTTTTTTAAC-------------AAGGAAACAAATATACT-----------------TGCCAGATTCTTTGAAAGGACCAATTATTGTCTTCGGTACCATAACAAA---GATTG--GCTTCTAGGCATTTCTAGATAACAATCACAATGTTACTACATTCAAAAGGATATTTAAGGCATGTACTTCAGAATAATCACA---TTGCTAAAGGAAAAAAATCCATAGTTTTGCATTCTGTCTATATATCATAAGTGA-GTGTTACTCATAAAGGATTTGAACTCCCTAAGCATATGTGTCCACTTCCACCATTAAAGTGGATTCAGGTGCTTGGCATGACTGTCTCCAGACAGGCTTTCTTCAAATAATTGATGGCTATGGTCTTACTGCCCCATTGAACTATATCTGGATACACTCATGTTGCTTTTA-CAAGAGTTTCATACAATTCCATGGTCTGCAGAACACGTGGGAAGTATCTCATAGTTTCTTTTATTAACACAAACTATTTTCACTTTCTCCAATGACAAATTACCCAAAATTAGGTTTTTTACACCTATTATGACTGAACATGATGAGAAATTCATGTGTAGACCACAGGTGTGTATTGCAAGCATTATGAACCCTTCGGTGG chr4 + 94230402 55903823 55903822 55904572 55903823 55903822 55904572 750 AATGTTTTGTATTCTTTTATTTATCT----AGGATGAGGAATAGCCTGAGTACAAGAGGTTTTTCTGGGAATGCATCCAAGAAATGCTAGCGGAGGCTTTATAGTTAATCAGTTTGTCAAAAGCAAGACTTTTTCAGCATGCAGCATCATTCACTTAATTTTTCATTAAGCCTTTTAATGTAAGCTCCATTAAAGCAAGCAGCTGTGATATGGAAATGCTTGTTTATGCAAGATCACTTGAAAGTCCTAACT--TTTCATCTGTGCAACAACAAACCGAACTACAGATCCTGAGCATTGCTGAACAGCA-TCA----GCCACAACAT---------------AGTCACACACCACACACTCACTACAGTCTTCCTTAAAG---------------TTTGTTCTCTGTTCATACATCATAACTGAAGTGTTATTCATAAAGGATTTAAAGTCTCCAAGCATATGCATCCACTTCCACCATTAAAGTGGATTCAGGTGCTTGGCATGACTGTCTTCAG-CAGACTTCCTTTAAATAATTGATAGCTGCCGTCCCGTTGCCCTACAGTTGTGTATCTGGATGTGCTCACATTGCATTTAGGGGGGGGTTAATACAAGTTGCTGGCTGACAGAATTTGTGGTATGGATCTCACACTTTCTTTTATTAACATGATCTATTTTCACATTCTCAGATGACGAACTGTGCCAAATGAGCTTTCTTGCACCTACTTTG-----ATATGATGAGAAATTTGTATGTCAGCCACAGCTGT-TA-TGAAAATGTTGTAAAACTTTCAGTGG ...:.:x.x..:..:x.:..:.x.:.----:.:.....:x...:::.x:::.xx.x....x:.:...x.....x:..::xxx..x.x.:::.::::::..x:.:::..---.........:..x..x...x.....::..-:..:..x.x...x....xx..:.--...x::......:-------------...x..:..:x.:.:x.-----------------...x....:x:.......xx.:..:.--.x..x..x..:.x.:......---:.:.:--.x.:..::.....x..::.:.:..-...----.::..x....---------------..x..:::..:x..x.x.x.::...---..x..x..:.---------------....:x:.....::...:.......x...-......:.............:..x..:.:.........::...............................................:...-...:...:...:...........:...::x...::::.....:.:x.xxx.:.........:::....::....x....-x::.:.x..x......x.:xx...::x:.....:x:....x.x.x......:.x...............::.x..........x.....x:.....:..:.::x.x....x..x...:..:......:.x..-----.:.............::.:...x::......x...-..-..x..:::..:.:..x.:...:.... 26M4D78M3I29M1I23M2I13M13I17M17I26M2D21M3I5M2I24M1D3M4D10M15D25M3I10M15D29M1I91M1D79M1I132M5D35M1D2M1D26M 488/704 69.3% 750/94230402 0.0% 95/704 13.5% 64661826 NA +3001 chr4 + 190214555 120582323 120582322 120582371 49 ATAAAATAGTTGGTTTTTTTTTTGTTTTTTTTTGTTTTTTTTGTTTTTT chr4 + 94230402 72938541 72938540 72938589 72938541 72938540 72938589 49 ATAATATGCTCGGTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT ....x..:x.:....x............x...........x.x...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 47643782 NA +3099 chr4 + 190214555 120620540 120620539 120620624 85 GTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG---------GTGGAGCTTGCAGTGAGCCGAGATGTGTGC chr4 + 94230402 76033210 76033209 76033302 76033210 76033209 76033302 93 GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGC-AGATGTGTGC .......:...........::........x.xx.x...xx:.x.......:.:..---------..:..:.x..xx.:x.:x.-.......... 55M9I19M1D10M 62/84 73.8% 93/94230402 0.0% 10/84 11.9% 44587330 NA +3248 chr4 + 190214555 120627080 120627079 120627122 43 AAAAACAACAACAACAAAACAAAACAAAAAACAAACGAACAAA chr4 + 94230402 90496495 90496494 90496537 90496495 90496494 90496537 43 AAAAACAACAACAACAAATCCAAACCAAAAACAAACAAACAAA ..................x.x....x..........:...... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 30130585 NA +3064 chr4 + 190214555 120698018 120698017 120698084 67 AAAATTGGGAATCATTTTATTTGTCTTCTTTTGTCTCCATATTTCCTCATTCTTCTCTAATTAAAAA chr4 + 94230402 73765937 73765936 73766003 73765937 73765936 73766003 67 AAAGTGAAGTTTCATTTTGTTTGTTTTCTTTCTTCTATGCATTTCTTTTTTTTTTTTTAATTAGAAA ...:.x::.xx.......:.....:......:x...x:::.....:.:x..:..:.:......:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 46932081 NA +3383 chr4 + 190214555 120710312 120710311 120710407 96 ACACTGAAAAGGCTTTTCTCCAGTGTGCGTCCTCTTGTGCTCATCCAGGCCTCGCTTCTGGCTGAAGGCCTTGCTGCACTCTGAGCACTTGTACGG chr4 + 94230402 8745682 8745681 8745777 8745682 8745681 8745777 96 ACACTGGTATGGCTTTTCCCCAGTGTGGGTCCTCATATGCTTTTTCAGCTCTGACGGATGACGGAATCCTTTCCCACACTCCACACATACGTGAGG ......:x.x........:........x......x.:....:x.:...x:..x:.xxx..:.x...xx.:..x.::.....::x:..:x:..:x.. 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 111964630 78249925 +3129 chr4 + 190214555 120728429 120728428 120728473 45 GTATGTGTGTGTGTATATATACATATATATATTTTTTTCTGATTT chr4 + 94230402 23522769 23522768 23522813 23522769 23522768 23522813 45 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTT ...:.................:........x::....:...x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 97205660 93008895 +3021 chr4 + 190214555 120770001 120770000 120770059 59 TATCCCTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTATTTTTTGAGGTGGAG chr4 + 94230402 29671934 29671933 29671992 29671934 29671933 29671992 59 TATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGGGGGGAG ...:::...x:.:..:...xxx.x...x...............:.......:..x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 91098067 NA +3082 chr4 + 190214555 120774848 120774847 120774903 56 ACACCACTTTCTCCTTCTCTGTCTCTCTCTCTCTCTCTTTCTATATATATATATAT chr4 + 94230402 47271089 47271088 47271144 47271089 47271088 47271144 56 ACAATATTTTCTCCTTCTCTCTCTCTCTCTCTTGTTTTTTTAATATATTTGTAGAT ...x:.:.............x...........:x:.:...:x......x.:..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 73503759 NA +3262 chr4 + 190214555 120774850 120774849 120774911 62 ACCACTTTCTCCTTCTCTGTCTCTCTCTCTCTCTCTTTCTATATATATATATATATATGTAT chr4 + 94230402 81722780 81722779 81722841 81722780 81722779 81722841 62 ACCCCTTTCTACTCTTCTATCTTCTTCAGTTGTTCTTTATATACATATATATATGTATGTAT ...x......x..::...:...:::..xx.:x:.....x....:..........:....... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 39052070 NA +3691 chr4 + 190214555 120774859 120774858 120774953 95 TCCTTCTCTGTCTCTCTCTCTCTCTCTTTCTATATATATATATATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG-GTCTGTGCGCATGTGTGTATAT ..:x...................x.x.x.x...:.:....:.:.:.:::::.:x.x..x..::..x......-:.x...::::........:... 72M1D22M 64/94 68.1% 94/94230402 0.0% 1/94 1.1% 59943329 NA +4011 chr4 + 190214555 120774865 120774864 120774961 97 TCTGTCTCTCTCTCTCTCTCTTTCTATATATATATATATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG---GTCTGTGCGCATGTGTGTATAT ...:.....x...........:.x.:.......:.:....:.:::.:::::.:x.x..x...:..x......---:.x....:.::.:.:....... 72M3D22M 65/94 69.1% 94/94230402 0.0% 3/94 3.2% 59943335 NA +3649 chr4 + 190214555 120774871 120774870 120774963 93 TCTCTCTCTCTCTCTTTCTATATATATATATATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGT chr4 + 94230402 60831534 60831533 60831623 60831534 60831533 60831623 90 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT---GGTCTGTGCGCATGTGTGTATAT .....x.........:...:.:.......:.:....:::.:.:.:.:.:x.x..x...::.x...:.---x:.x....:.:..:...:...:. 67M3D23M 61/90 67.8% 90/94230402 0.0% 3/90 3.3% 59943337 NA +3203 chr4 + 190214555 120774881 120774880 120774972 92 TCTCTTTCTATATATATATATATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTATATATGTG chr4 + 94230402 21109206 21109205 21109297 21109206 21109205 21109297 92 TCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG .....x.xx:::...x.....:..:x:::....::x::....:x....:....:.::x:..::x.x...........:....x....:::.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 99665675 90548880 +3515 chr4 + 190214555 120774897 120774896 120774996 100 TATATATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTA--------TATATGTGTGTGTATATGTATATGTGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:.:...x.x...:x::....x........:x:::.....:x:....::x...:::......--------.x.:...:.:...:....x.....::.::.:. 68M8I32M 65/100 65.0% 108/94230402 0.0% 8/100 8.0% 99665703 90548852 +3181 chr4 + 190214555 120774904 120774903 120774997 94 ATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATAT chr4 + 94230402 5214228 5214227 5214321 5214228 5214227 5214321 94 ATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..x:..:.:..:::.x..:.x.::.:::.:..x..::.:.:..::.x.::....:.:..:::.x.:........::...:.x......::.:.. 94M 54/94 57.4% 94/94230402 0.0% 0/94 0.0% 115560676 74653879 +3135 chr4 + 190214555 120774914 120774913 120774976 63 GTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTATATATGTGTGTG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:::..::..x:...:.:.x......:...:..........::..x.....::..x...:.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 34140985 NA +3021 chr4 + 190214555 120774934 120774933 120775001 68 ATGTATATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATATATAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...x:::.::...:..:x:...:.:.x......:...:..........::..x...:.::..x.:... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 34141011 NA +3054 chr4 + 190214555 120774939 120774938 120775007 69 TATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATATATATACACAA chr4 + 94230402 6200763 6200762 6200831 6200763 6200762 6200831 69 TATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATAGCTGTCCACAA ...x.x....::.......:...x...:.....x.......x.x:.:.::.:x.....xx.:.x..... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 114574176 75640379 +3687 chr4 + 190214555 120795773 120795772 120795842 70 CATGGTGGCACATGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGACACAAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:.--......:...........:.........x.x::x...x..........::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 44762576 NA +3123 chr4 + 190214555 120813988 120813987 120814051 64 CCCCAATCTTCAGTCTTCTCTCTCCTTTTCATGGCTTCTCCTCTTTTTCACCCTAGAAGAATCC chr4 + 94230402 51185766 51185765 51185829 51185766 51185765 51185829 64 CCCAAATCTTCAGTTTTCTTAGCCCTTTTCTTGCCTTCTTTTCTTTTAGGCCCTCAAGGAAGCC ...x..........:....:xx:.......x..x.....::......xx:....x:.:...x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 69628222 NA +3465 chr4 + 190214555 120843203 120843202 120843263 61 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........:.::........x.xx.x...xx:...........:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 44809999 NA +3211 chr4 + 190214555 120857222 120857221 120857287 66 GTGGCACATGCCTATAGTCCCAGCTATTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..:.--.:....:.......:...::.:......x.xx.x...x...........:.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 44824021 NA +3080 chr4 + 190214555 120863150 120863149 120863214 65 TCTGTCTAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACA chr4 + 94230402 51472483 51472482 51472547 51472483 51472482 51472547 65 TCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATA ...x.x:...x.x.x...::......:..x.....:.......x.....:.:.:..x:.....:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 69390667 NA +3301 chr4 + 190214555 120863152 120863151 120863216 65 TGTCTAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACACA chr4 + 94230402 4409057 4409056 4409121 4409057 4409056 4409121 65 TGTCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ........:xx...:.:.xx:.::x.:..:...........:.:.........x.x......... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 116454095 73760460 +3538 chr4 + 190214555 120863199 120863198 120863247 49 CACACACACACACACACACACACACACATATATATGTATATATATATTT chr4 + 94230402 74526077 74526076 74526125 74526077 74526076 74526125 49 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ..............::x...:.....x.......:........:..... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 46337122 NA +3512 chr4 + 190214555 120872618 120872617 120872696 79 GTGGTGCACACTTGTAGTCCTAGCTACTTGGGAGACTGAGCTGGGAGGATGGCTTGAGCACAGGAATTTAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.:.........::..:......:xx.x.:.xx:.....:.x...:.::..x:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 44839417 NA +3836 chr4 + 190214555 120904060 120904059 120904132 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCTCTTGAACCCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.xx.x...x.x...........:..x.xx:..:..:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 44870855 NA +3362 chr4 + 190214555 120941574 120941573 120941634 61 GTGCCCCTGTAATCCCAGCTACTTGGAAGCCTGAGGCAGGAGAATCGCTTGAACCTGGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x.x....:.:...........:...x.....x.xx.x...x.:........::.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 44908370 NA +3069 chr4 + 190214555 120987442 120987441 120987508 67 AGAGTATGTGTTTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTAATTTGCTTAGAGGTGTT chr4 + 94230402 77846766 77846765 77846832 77846766 77846765 77846832 67 AGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT ..::.x...:.x:...:...:......x.......:....x.x::..:.::...:..x.x....:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 43140676 NA +3549 chr4 + 190214555 121003502 121003501 121003580 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGATGTGGGAGGATCACTTGAACCCAGGAGGCACAGATTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::.......xx:xx.x.:.x.............:..x:x::.::...:. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 44970301 NA +3388 chr4 + 190214555 121038847 121038846 121038929 83 CGTAGTGGCATGCACCTCTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAGCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....--.....x.x.:..:...........::........x.xx.x...x::...:.:.....:..x.xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 45005650 NA +3607 chr4 + 190214555 121039116 121039115 121039212 97 GATACGTATACATAGTTATATATATATGTGTATATATATATGTATATATATATATAAAGACTATGTGTGTGTGTGTGTATATATATATATATATATA chr4 + 94230402 6244961 6244960 6245057 6244961 6244960 6245057 97 GACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACA ..:.:...x...::xx..........::x:........:.:..x:x..:x.::xx..::.X:x.....:x.x.........x.........:.:.:. 97M 63/96 65.6% 97/94230402 0.0% 0/97 0.0% 114794155 75420400 +16561 chr4 + 190214555 121061244 121061243 121061478 235 GAGCTTGTTTGGAGGTTCTGGCAGGGGAGCGCAGCTACTCATATACCGTTGACCAAAGACCGGT-CCTCCTTCATCGGGGATGGTCATTCTCTTTGGCCAAGTGCACAGCTTCGGGAGCGATGCACATGGAGCAGGGAGGAAGGAAGGGGACACCCGCCTAGCCAGCCAGATCAGCTGAATCAACCCTGGCGATCAAAGGGTTGACAAATGTCGCAGCCAGATCGCCCTCACGTCC chr4 + 94230402 24950307 24950306 24950541 24950307 24950306 24950541 235 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCC ...................:..................-.:......x.....::.x..x....-..x:..::........x....:.:.....:.:.....:.::............x..:...........:.x...::.......:.......:...................::............:......x...x.....:........................:... 38M1D25M1I171M 200/234 85.5% 235/94230402 0.0% 2/234 0.9% 96110937 94103618 +3039 chr4 + 190214555 121071730 121071729 121071770 41 TAAATTAAAAACAAACAAACAAACAAACAACAACAACAATA chr4 + 94230402 7530451 7530450 7530491 7530451 7530450 7530491 41 TAAATTAAAAACAAACAAACAAAAAAAAACCAACAATAATA .......................x...x.x......:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 113541279 76673276 +3254 chr4 + 190214555 121071730 121071729 121071782 53 TAAATTAAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAA chr4 + 94230402 5735190 5735189 5735242 5735190 5735189 5735242 53 TAAATTAAGAACAAAAAAACAAACAAAAATCAACAAAAATATAAAGCAGAAAA ........:......x...........x.x......x....x...:x.:.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 115336540 74878015 +3040 chr4 + 190214555 121071736 121071735 121071783 48 AAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAAC chr4 + 94230402 49372043 49372042 49372090 49372043 49372042 49372090 48 AAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAAC .............x..xx.x......:..:...:..x........... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 71699693 NA +3025 chr4 + 190214555 121071741 121071740 121071783 43 CAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAAC chr4 + 94230402 28522451 28522450 28522493 28522451 28522450 28522493 43 CAAAAAAACAAACAAACAACAACAACAATAAAATTAAAACAGC ....x............................xx....x.:. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 92549290 NA +3026 chr4 + 190214555 121071746 121071745 121071779 34 AAACAAACAAACAACAACAACAATAAAAAAAAAA chr4 + 94230402 24125117 24125116 24125150 24125117 24125116 24125150 34 AAACAAACAAACAACAACAACAACAAAAAAAAAA .......................:.......... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 96946629 93267926 +3446 chr4 + 190214555 121079716 121079715 121079794 79 CTGTGTGAACTT-GGAAAGTTATTTAATCTTTCTGAAGTTCAGTTTCCTCATCTGTAAAATGGGGATAATAAAATTTCTC chr4 + 94230402 79037112 79037111 79037191 79037112 79037111 79037191 80 CTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGATTTTC ....:...x...-..:.........x..:.x.....:x....:..:.::..xx.:.......x...x.....x:x..:.. 12M1I67M 58/79 73.4% 80/94230402 0.0% 1/79 1.3% 42042604 NA +3249 chr4 + 190214555 121093991 121093990 121094064 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTAAGGTGGGAGGATCACCTAAGCACAGGAAGTCGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::.....:..x:xx.x.:.x...:.:.:.x...:.:x.:x:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 45060787 NA +3277 chr4 + 190214555 121106853 121106852 121106936 84 AAACATTTACTGAGGACTTGTATGCCAGGTATTTTTGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTGGTTTTTGGCATGCATCA chr4 + 94230402 28233289 28233288 28233372 28233289 28233288 28233372 84 AAACATTTATTATTTACTTCCATGCTAAATTATTGGGGCTTTTTGTTGTTGTTGTTTCGTTTCTTTGGTTTTTAGTTTAAATCA .........:.:xxx....x:....:.::.xx..xx..:.....x..x.....xx..:....x..........:.:x.:x.... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 92873564 NA +3222 chr4 + 190214555 121114269 121114268 121114308 40 CTCTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:::..................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 45866220 NA +3689 chr4 + 190214555 121114271 121114270 121114310 40 CTTTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................................... 40M 39/40 97.5% 40/94230402 0.0% 0/40 0.0% 45866222 NA +3199 chr4 + 190214555 121114273 121114272 121114314 42 TTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::...............x.x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 45866226 NA +3002 chr4 + 190214555 121114274 121114273 121114308 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 108512969 81701586 +3316 chr4 + 190214555 121114275 121114274 121114310 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 108512971 81701584 +3102 chr4 + 190214555 121114277 121114276 121114312 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 108512973 81701582 +3443 chr4 + 190214555 121124591 121124590 121124723 133 TAGAAAGAAAAAGAAGAAAGAAAGAAAGAAAGAAAGA---AAGAAGGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA---AAGAAAGAAAGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGGAAGACAG chr4 + 94230402 8397449 8397448 8397587 8397449 8397448 8397587 139 TAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGA--GTAGAAGGGTAAAAGAG ....x...:xx.....:...x:...:....:..x.:.---:.......--..x:.::x....:x:.:..:..:...x....x.x:.....---::.:x.........xx...:.::::....--.x..:.:..x..:.x.. 37M3I8M2I40M3I29M2D17M 87/131 66.4% 139/94230402 0.0% 10/131 7.6% 112727142 77487413 +3049 chr4 + 190214555 121124601 121124600 121124675 75 AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA .:...:::......x..x...x...x....x....:..xx.x.:.x..........::.x.x.:....x:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 80012423 NA +4075 chr4 + 190214555 121124725 121124724 121124882 158 AAGAGAGAAAGAAGAAAGAAAGAAAGAAACAGAGGGAAGGAGAGAGAGAAAGAAAGAGAAAGGAAGAAAAAAGAAAGAAAGAG---AGGGAGGGAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAA-AGAAAGAAAGAGAAAGA chr4 + 94230402 49044652 49044651 49044813 49044652 49044651 49044813 162 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA ..:...xx..::.....::..x..:::.x:..:..x::xx...:...x..:x.:x.....:x:xx:.:x:.::..:.:.....---.:.:.:.:...:..:x::.:.:x................x....x.::...xx:...x-..:....::..:..x.. 83M3I58M1I17M 95/158 60.1% 162/94230402 0.0% 4/158 2.5% 72080073 NA +3266 chr4 + 190214555 121124796 121124795 121124909 114 AGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGAAA chr4 + 94230402 44866506 44866505 44866610 44866506 44866505 44866610 105 AGAAAGACATACAGG---------ACAAAGAAAAACAGGGACAGCAAATAACTAGGAAAGAAATAGAATAATACAGAAAAAATGACAAAGGAGGGGGAAGAAAGAAGAAATGAA .......x.x.x...---------.x.:...:.:.x.::..x.:x...x..xx.:........x.:.:x..x.x.....:.:x:.x....:.:...:.........::..x:.. 15M9D90M 70/105 66.7% 105/94230402 0.0% 9/105 8.6% 76258290 NA +3115 chr4 + 190214555 121124842 121124841 121124923 82 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .:.....:......x..x...x...x....x.:....:xx.x...x.::.......::.x.x.:::..x....:.:..x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 80012664 NA +3203 chr4 + 190214555 121124850 121124849 121124978 129 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAGGAAGAAAGAA chr4 + 94230402 54011595 54011594 54011723 54011595 54011594 54011723 129 AAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:...:...x........x......:.:::.:..x:xxxx.:..x:x..x.......::x....:x:xx....xxx:...:..xxx.x::x.x::.....:..x:.....x:...:..::..:...:.. 129M 76/129 58.9% 129/94230402 0.0% 0/129 0.0% 67113255 NA +3108 chr4 + 190214555 121124897 121124896 121124974 78 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAGGAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .:.....:......x..x...x...x....x.:..:..----.:.x..........::.x.x.....:x..:::....x:.. 38M4I40M 56/78 71.8% 82/94230402 0.0% 4/78 5.1% 80012719 NA +3883 chr4 + 190214555 121159102 121159101 121159185 84 ACGTGGTGGCATGCACCTGCAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::....--.....x..:...:.........x.::........x.xx.x...x.............:..x.xx:..:..:.. 9M2D73M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% 45125906 NA +3848 chr4 + 190214555 121160339 121160338 121160421 83 CATGGTCGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTGAACCCTGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x.......--....:.:...........::........x.x::x...x...........x.:..x:xx:.....:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 45127142 NA +3561 chr4 + 190214555 121219069 121219068 121219142 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCAAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x..........x..:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 45185865 NA +3367 chr4 + 190214555 121225328 121225327 121225442 115 GTTTCAA-----AACAATGGAGATATTTAATCTTGGTCATGTTTTCAAATATAATTGATTTTTTACTCATGCTCTGTGCAATTTCATTAGAAAAGCATTTTTTCTTCTT----GTTTTTTTCTT chr4 + 94230402 22117793 22117792 22117912 22117793 22117792 22117912 120 GTTTCAACCCACAGCAATTTAGTTGGCTGATATTGTT----TCCTTAAAGATGACTAGTTTTGTATTCATGGTCTTTGCTGTTTTATTAGAAAAATAGTATTTCTTATTTATAGTTGTTGTCTT .......-----.:....xx..x.:x:.:..x...x.----.::.:...x..:.:.::....x..:.....x...x...x:...:.........::.x.x......x..----...x..x.... 7M5I25M4D68M4I11M 79/111 71.2% 120/94230402 0.0% 13/111 11.7% 99107535 91107020 +3482 chr4 + 190214555 121229452 121229451 121229534 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x.xx.x...x::........::.:..x.xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 45196255 NA +3005 chr4 + 190214555 121229859 121229858 121229904 46 AGAGTGAGACTCCGTTTCAAAACAAACAAACAAACAAAAAAACCCC chr4 + 94230402 64786765 64786764 64786810 64786765 64786764 64786810 46 AGACTGTGACCCCAATTAAAAACAAACAAACAAACAAAAAAAACCC ...x..x...:..:x..x........................x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 56443094 NA +3399 chr4 + 190214555 121244672 121244671 121244750 79 AGAAAACAAAATAAAAACAAAAACAAACAAACAAAAAACAAACC-AAATGTTATTAA--CCAAATTACTAAAATAAAGGAAA chr4 + 94230402 37643087 37643086 37643168 37643087 37643086 37643168 82 AGAAAAGCAAAACAAAGTAAAAACAAACAAACAAAAAACAAACTGAAAAGTTACTGATTCAAAATCATGAATATGAAGTGAA ......xx...xx...::.........................:-...x....:.:.--.x....:.:x..x..:...x:.. 44M1I12M2I23M 61/79 77.2% 82/94230402 0.0% 3/79 3.8% 83601585 NA +3508 chr4 + 190214555 121245583 121245582 121245652 70 CGTGGTGGTAGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.....--..:.x....:.:...........::........x:xx.x...x.............:.. 9M2D59M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 45212386 NA +3785 chr4 + 190214555 121270230 121270229 121270308 79 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGGAGTCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x.:.........:.:..::xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 45237029 NA +3015 chr4 + 190214555 121270846 121270845 121270905 60 ATTAACTGTTTTTTGTTTTTTTTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTT chr4 + 94230402 18818317 18818316 18818376 18818317 18818316 18818376 60 ATTAACTTCAGTTGGTTTTTTTTTTGTTTGTTTTGGTTTGCTGGGTTTTTTGTTTGGTTT .......x:xx..x...............x.....x....:.xx.....x.x....x... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 102452529 87762026 +3434 chr4 + 190214555 121292843 121292842 121292907 65 CAAGAGC----GAAACTCCATCTCAAAATAAAAAAAAAAGGTGGGGGGGAGGAATTGGAAAATTCACAA chr4 + 94230402 75270185 75270184 75270253 75270185 75270184 75270253 69 CAAAAGCAGCAGGAACTCTCTTTCAGAAAAAAAAAAAAGGGGGGGGGGGGGGGATTAGAAAAATCAAAA ...:...----.:.....:x.:...:..x.........:..x.......:..:...:.....x...x.. 7M4I58M 51/65 78.5% 69/94230402 0.0% 4/65 6.2% 46022658 NA +3854 chr4 + 190214555 121293135 121293134 121293205 71 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGTGTGGCTGAGGCATGAGAATCACTTGAACCTGGGAGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::.........:--......:...........x:x.......x.x..x...x..........::.:... 14M2D55M 55/69 79.7% 69/94230402 0.0% 2/69 2.9% 45259938 NA +3048 chr4 + 190214555 121293471 121293470 121293548 78 AAATAAATAAAATAGAGACTAGAAAAAACAATAGAAAAGATCAATGAAACTAGGACTTAGTTTCTTAACAAGATTGAA chr4 + 94230402 90801768 90801767 90801845 90801768 90801767 90801845 78 AAGAAAATAAATTAAAAACACAACAAAACAACAGAAAAGAGCAATAAAAGTAAAGCTTATCCTCATAAGGTAATTTAA ..:x.......x..:.:..xx:.x.......:........x....:...x..:::....x::..x...x:x:...x.. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 30491703 NA +3554 chr4 + 190214555 121294962 121294961 121295033 72 GCACCTGCAGTCCTAGCTACTCGGGAGGCTGAGGCAGGTGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x..:...:.:.......:.::........x.xx.....x..........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 45261756 NA +3366 chr4 + 190214555 121295371 121295370 121295460 90 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAAAATTGCTTGAACCCGGGAGGTGGAGGTTTCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x......:...........::........x.xx.x:..x::.........:.:..x.xx:..:.x:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% 45262165 NA +3010 chr4 + 190214555 121311546 121311545 121311593 48 GCCCAGGCAGCAGACTGAGATTCATCTAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 75358305 75358304 75358352 75358305 75358304 75358352 48 GCCCAAGCAACAGATTTTGTTTCACCAAAAAAAAAAAAAAAAAAGAAA .....:...:....:.xx.x....:.x.................:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 45953241 NA +3397 chr4 + 190214555 121339819 121339818 121339897 79 GTGGTGGGCACATGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCATTTGAGCTTGGGAGGCTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...:...:..:...........::........x:xx.x.:.x..:....:.:::.:..x:.x:.....:.. 6M2D71M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 45306618 NA +4313 chr4 + 190214555 121359600 121359599 121359727 128 GTGTAAGTTAATACTTAGTAAACTCATATATATATGTGTGT----GTGTGTATATATATGTGTATATATATATATGTGTGTGTATATATGTGTGTATATATGTGTGTATGTGTGTGTGTGTATATATGTGTG chr4 + 94230402 21109166 21109165 21109297 21109166 21109165 21109297 132 GCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG .:...xx.x..x.x.x..x...:.:::x....:........----...x.::...x...:....:x:.:.....:x:....::x....:..:....:x:...:x.x.:...:.:.....:.:x.....::.. 41M4I87M 83/128 64.8% 132/94230402 0.0% 4/128 3.1% 100250434 89964121 +3416 chr4 + 190214555 121359630 121359629 121359733 104 TATATGTGTGTGT----GTGTATATATATGTGTATATATATATATGTGTGTGTATATATGTGTGTATATATGTGTGTATGTGTGTGTGTGTATATATGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....::.......----...x:::...x.:.:.:..:x:.:....::x:.....:x...::..:.:..:x::..:x.x.....:.:.......:x..:..::..:.:. 13M4I91M 64/104 61.5% 108/94230402 0.0% 4/104 3.8% 100250436 89964119 +3167 chr4 + 190214555 121359668 121359667 121359793 126 TATGTGTGTGTATATATGTGTGTATATATGTGTGT----ATGTGTGTGTGTGTATATATGTGTGTGTATATATATATTTGTGTGTATATATGGGAGTGTATATATATAT---ATAGGAGTGTGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109326 21109194 21109193 21109326 133 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTA ...:::.....:.x.x....x.::...x.:.:...----.::.:.::x:.....:x...::..:....:x:..::x.:.....:...:.:.:x..:.:.::..::.:.:---..x:x...x.x....x..:.. 35M4I70M3I21M 75/126 59.5% 133/94230402 0.0% 7/126 5.6% 100250474 89964081 +3503 chr4 + 190214555 121359694 121359693 121359759 66 TATGTGTGTATGTGTGTGTGTGTATATATGTGTGTGTATATATATATTTGTGTGTATATATGGGAG chr4 + 94230402 86633930 86633929 86633995 86633930 86633929 86633995 66 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAAG .::...:...x..:.:...x......:...:...........:..x.x.:..::.x.:.....:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 34725764 NA +4362 chr4 + 190214555 121365474 121365473 121365585 112 TAATTAATTAATTAAATTATATATATAATATATATAATATATATTATATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAATATATATTATA chr4 + 94230402 26320233 26320232 26320344 26320233 26320232 26320344 112 TATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..x.....:.::.x..x.x...x.xxx..:......x..:............:......:.......x.xx...:..x:xx...:.....x..xx:...x:.....:.x... 112M 79/112 70.5% 112/94230402 0.0% 0/112 0.0% 95045241 NA +3593 chr4 + 190214555 121365478 121365477 121365600 123 TAATTAATTAAATTATATATATAATATATATAATATATATTATATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAATA-TATATTATATATATTATATATATA chr4 + 94230402 26320233 26320232 26320341 26320233 26320232 26320341 109 TATTTAATCAGCTTAAATTTATCTCACATGTA------------TATACTACATATTATATATACTATATACAATAT---ATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTA ..x.....:.:x...x..x...xx:.:..:..------------....:..:....x.......:......:.....---..x...xx.:...x.....-......x.xx:....:.....:.. 32M12D33M3D19M1I24M 81/108 75.0% 109/94230402 0.0% 16/108 14.8% 95045245 NA +3887 chr4 + 190214555 121365484 121365483 121365605 122 ATTAAATTATATATATAATATATATAATATATATTAT-ATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAATATATATTATATATATTATATATATATAATA chr4 + 94230402 46018819 46018818 46018938 46018819 46018818 46018938 120 ATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGA--ATATATTAGTCGTA-TGTATAGATATGATA ..:x...x..x:...x.x::.....::.....::.:.-......x...x...xx::....x........x.x........:.x..:...x.--........xx::..-.:....x....:... 37M1I53M2D14M1D15M 85/119 71.4% 120/94230402 0.0% 4/119 3.4% 75346665 NA +3576 chr4 + 190214555 121365492 121365491 121365576 85 ATATATATAATATATATAATATATATTATATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAATA chr4 + 94230402 26320260 26320259 26320344 26320260 26320259 26320344 85 ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:......x..:....x.......:......:.x.....x..x...:...:xx...xx....x.xxx:...xx.....:..... 85M 62/85 72.9% 85/94230402 0.0% 0/85 0.0% 95045232 NA +3805 chr4 + 190214555 121365495 121365494 121365628 134 TATATAATATATATAATATAT-ATTATATATATT---------ATATATAAT--------ATATATTATATATAATATATAATATATATTATATATAATATATATTATATATATTATATATATATAATATATATATTATATATATTATATAT chr4 + 94230402 26320189 26320188 26320338 26320189 26320188 26320338 150 TGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATG-TATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA-GTATATTTTTAGTATTGTATAT .:.:.x..xx...x.....x.-x......:....---------....x....--------..x...:x:.:..:-......x..:............x......:x......x.xx...:...x.....-:......x.xx:....:..... 21M1I12M9I9M8I14M1D54M1D22M 100/132 75.8% 150/94230402 0.0% 20/132 15.2% 95045306 NA +4143 chr4 + 190214555 121365530 121365529 121365683 154 ATATAATATATATTATATATAATAT---ATAATATATATT---------ATATATAATATATATTATATATATTATATATATATAATATATATATTATATATATTATATATTATATATATATTTTATATATTATATATTATATATATTTTATATATTATATATATA chr4 + 94230402 26320183 26320182 26320341 26320183 26320182 26320341 159 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAAT-CAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA------GTATATTTTTAGTATTGTATATGTA ..:..:.:.:.xx.xx...x.....---x.x....:....---------....x....-:.xx...x..x...:x:.:..:....xxx..:............:......:x......x....x.:...x.x...------:........xx:....:.....:.. 25M3I12M9I9M1D76M6D25M 106/147 72.1% 159/94230402 0.0% 19/147 12.9% 95045347 NA +3406 chr4 + 190214555 121365531 121365530 121365688 158 TATAATATA---TATTATATATAATATATAATATATATTATATATAAT-ATATATT-ATATATA------TTATATATATATAATATATATATTATATATATTATATATTATATATATATTTTATATATTATATATTATATATATTTTATATATTATATATATATATAA chr4 + 94230402 26320179 26320178 26320342 26320179 26320178 26320342 164 TGTAATGTAGTGTGTCATTAATAAAATAT----TTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTAT-TGTATATGTAA .:....:..---.:.:..xx....x....----.x.x......:..x.-.x..:..-....x..------...x..x...x.x.:..:.....xx..:...........xx......:.x.x...x......:...:xx...xxx.x.x.x..x...-.:.....:... 9M3I17M4D15M1I7M1I7M6I87M1D11M 111/153 72.5% 164/94230402 0.0% 16/153 10.5% 95045352 NA +3354 chr4 + 190214555 121383497 121383496 121383564 68 TTTATTTCTGGTTTTAGCTGTTGTTTGTTTGGTTGTTGTTTTTGTTTTCTTTTGTTTTTTTTTTTTTT chr4 + 94230402 2231873 2231872 2231940 2231873 2231872 2231940 68 TCTACCCCTTGTTTTGGGTTTTGGTTGGTTGGTTTTTAGGTTGGTTTTCTTTTTTTTTCTTTTTTTTT .:..:::..x.....:.x.x...x...x......x..:xx..x..........x....:......... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 119151624 71062931 +3209 chr4 + 190214555 121387422 121387421 121387494 73 TATATGAGGGATGTGTGTGTGTGTATACATGTATATATATATGTTTATTTATGTATACGAACAGATACAAAAA chr4 + 94230402 6083165 6083164 6083237 6083165 6083164 6083237 73 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAA .....:x..x:..........:.:.....::x.:........:.x....:x.::..:::..x.:.x.x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 115304257 74910298 +3278 chr4 + 190214555 121403454 121403453 121403517 64 ATTTTTTTGTGTG---TATACACACACACACACACACACACACACACACACACACACACTTATAGGA chr4 + 94230402 46140843 46140842 46140909 46140843 46140842 46140909 67 ATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAA ...x........:---....:........x.x....:........::::.:.:...x.....:..:. 13M3I51M 49/64 76.6% 67/94230402 0.0% 3/64 4.7% 75262611 NA +3022 chr4 + 190214555 121472168 121472167 121472222 55 GTTTAAAATGTTTTATGTATTTTTGTATGTTTAAAGTATTTTAAAATAATTTTAA chr4 + 94230402 9521144 9521143 9521198 9521144 9521143 9521198 55 GCTTAAAACAGGTTGTGTATTTTTGGAAATCTGAAATATTTTCAAATAATTTTAA .:......::xx..:..........x.x:.:.:..:......x............ 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 111951024 78263531 +3322 chr4 + 190214555 121495288 121495287 121495342 55 ATTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578265 26578264 26578319 26578265 26578264 26578319 55 ATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ........................:.:.:.:.:xx.x...:...x...::..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 94917023 NA +3074 chr4 + 190214555 121496316 121496315 121496385 70 TACTCTGATGATAGTTTCTTTTGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780444 52780443 52780510 52780444 52780443 52780510 67 TACTCTAACATCACTTGCT---GCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG ......:.::x:.x..x..---....:.....:....:......:.:x.xx.x..:.............. 19M3D48M 50/67 74.6% 67/94230402 0.0% 3/67 4.5% 68715872 NA +3442 chr4 + 190214555 121502580 121502579 121502668 89 CCCTTTTCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCCCTCCTTCCTTCCCTCCCTCCCTCCCTTCCTTCCTTTTCTCCCTC chr4 + 94230402 53764540 53764539 53764628 53764540 53764539 53764628 89 CTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC .::...:.:.:....:.:....:............x:x..:x:::.:....x....:..x...:::::.x...:.x:.x.::..:.::. 89M 54/89 60.7% 89/94230402 0.0% 0/89 0.0% 67738040 NA +3483 chr4 + 190214555 121533557 121533556 121533628 72 GTACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCTCTTGAACCCGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..x......:...........::........x.xx.x...x.x.........:.:.:x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 45500351 NA +3320 chr4 + 190214555 121581303 121581302 121581369 67 TGTAATCCCAGCTACTTGGAAGGCTGAGTCAGGGGAATCTCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........:.........:.xx.x...x.x........::.:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 45548092 NA +3371 chr4 + 190214555 121583042 121583041 121583124 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGACTGAGGTGGGAGGATAGCTTGAGCCCAGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:...........::..:.....x:xx.x.:.xx:.....:.....:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 45549845 NA +3459 chr4 + 190214555 121583151 121583150 121583221 71 CAGCCTGGGTAATAGAACCAGACTGTTAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGA chr4 + 94230402 69922647 69922646 69922717 69922647 69922646 69922717 71 CAGCTTGAGTAAGAAGACCTGACTGGGAAACAAAATGAAAAAAAAAAAAGGGGGGGGGGGGAGGGGGGGGA ....:..:....x.::...x.....xx...x....x:....:..:..:.:.::.::..:.....:..:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 51660504 NA +3191 chr4 + 190214555 121640799 121640798 121640878 80 AGTGGCGAATACCCATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.--:..x::..:.:...........::........x.xx.x...x::.........:.:..x.xx:..:..:.. 7M2D71M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% 45607599 NA +3437 chr4 + 190214555 121650626 121650625 121650705 80 GATGGTACACA--------CCTGTAGTCCAAGCTACTCGGGAGGCTGAGGCAAGAGGATCACTTGAGCCTGGGAGGTCAAGGCTGTGG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:......--------.x......:.x.......:.::........x.xx.x.:.x.......:..::.:..x.:x:......:. 11M8I69M 58/80 72.5% 88/94230402 0.0% 8/80 10.0% 45617436 NA +3118 chr4 + 190214555 121674175 121674174 121674276 102 GGGGAAGAGGGAGGGGAGGGGAGGGGAGGGAGAGGGGCGGAAAGGAGAAGGGAGGGGAGGGAGAGGGGAGGGGAGGGAGAGGGGATAGGAAGGAGAAGGGAG chr4 + 94230402 75729018 75729017 75729119 75729018 75729017 75729119 102 GGAGTAGTGAACTGGAAAGAGATGTGGCAGAGAGAAATTGTAGATGGAGTAAAGGGGGGAAAAAAAAGGAGGGGGGGGGGGGGGATGGAAAGGCAAAGGGAG ..:.x..x.::xx..:.:.:..x.x.:x:.....::::x.x.::x:..:x::.....:.::.:.:::.::...:...:.:......:.:....x:....... 102M 57/102 55.9% 102/94230402 0.0% 0/102 0.0% 45945157 NA +3127 chr4 + 190214555 121674275 121674274 121674377 103 AGGGGAAGGAAAGGGGAGGGTAAGGAAATGGGAGGGGAAGGAAAGGTGAAGGAAAGAAAAGGAAAAAGGAGAAAGGGGAAAGAGAAAGGAAAGAAAAGAAAAG chr4 + 94230402 15855376 15855375 15855478 15855376 15855375 15855478 103 AGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAG ..:.x..:..:..:.:..x.x.x:::..x.:xxx..:x.:.xx.:.x...:..xxx.:.::..:.:..:......:.....::..x.........x::..... 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 105818899 84395656 +3111 chr4 + 190214555 121685012 121685011 121685071 60 CTCTTAGAAAAAAAAAAAATATGTATATATATATATATATACACACACACATATATATAT chr4 + 94230402 85548414 85548413 85548473 85548414 85548413 85548473 60 CTCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .....x:............x.xx.....:...:.:.:.::.:...:.:.:....x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 36136598 NA +3944 chr4 + 190214555 121695762 121695761 121695842 81 CATGGTGGGGCGCCTGTAATCCCAGCTACTTGGAAAGCTGAGACACGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....x..:.x....:.:...........:..:......x.x:.x...x::.........:.:..x:xx:..:..... 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 45662565 NA +3109 chr4 + 190214555 121700139 121700138 121700192 54 TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....................:.:.:.:.:.:xx.x...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95121873 NA +3129 chr4 + 190214555 121700147 121700146 121700200 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95121881 NA +3046 chr4 + 190214555 121700149 121700148 121700202 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.x.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95121883 NA +4000 chr4 + 190214555 121735756 121735755 121735827 72 GCACTTGTGGTTTCAGCTACTTGCAAGGCTGAGGCAGGAGAGTCACTTGAACCCAGAAGGCAGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...:...:..........x.........x.xx.x..:x................x:xx:..:..... 72M 56/72 77.8% 72/94230402 0.0% 0/72 0.0% 45702550 NA +3750 chr4 + 190214555 121737556 121737555 121737637 82 GTGGCACACATCTGTAGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT-----GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::...:.-----.....:...........::........x.xx.x...x.:.........:.:..x.xx:.....:.. 11M5D66M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 45704355 NA +3160 chr4 + 190214555 121789232 121789231 121789285 54 GGGGGGGGGTTGTTTGTTTGTTTGTTTGTTTTGGTTTTTCTTATTATTGTTGTT chr4 + 94230402 64090127 64090126 64090180 64090127 64090126 64090180 54 GGAAGGGGCTTTTTTGTTTGTTTGTTTCTTTTGGTTTCTTTTGGTTGTGTTGTT ..::....x..x...............x.........:.:..:x.xx....... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 57699105 NA +3715 chr4 + 190214555 121798936 121798935 121799032 97 GTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTTAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ........:.--......:...........::........x.xx.x...x:....x....::.:..x.xx:..:..:..------..x..x...... 10M2D67M6D12M 67/89 75.3% 89/94230402 0.0% 8/89 9.0% 45765735 NA +3347 chr4 + 190214555 121810547 121810546 121810624 78 TGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.....--....:.:...........::........x.xx.x...x::......:..:.:..x:xx:..:..:.. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 45777345 NA +3051 chr4 + 190214555 121832322 121832321 121832376 55 AAAACAAACAAACAAAACAAACAGCAACAACAACAAAAAAACAA-AAACAAAAAAC chr4 + 94230402 26428834 26428833 26428889 26428834 26428833 26428889 56 AAAAAAAAAAAAAAAAACCAGCAGCAACAACAACAAAACAACAGCAAATAAAATAC ....x...x...x.....x.:.................x....:-...:....x.. 44M1I11M 46/55 83.6% 56/94230402 0.0% 1/55 1.8% 95403488 NA +3032 chr4 + 190214555 121832323 121832322 121832391 69 AAACAAACAAACAAAACAAACAGCAACAACAACAAAAAAACAAAAACAAAAAACAACCTACAGATGTGA chr4 + 94230402 26428832 26428831 26428900 26428832 26428831 26428900 69 AAAAAAAAAAAAAAAAAAACCAGCAGCAACAACAACAAAACAACAGCAAATAAAATACTCCTGAAGAGA ...x...x...x....x..x.....:.........x.......x.:....x..x.xx..x.x..x.x.. 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 95403491 NA +3072 chr4 + 190214555 121832323 121832322 121832368 46 AAACAAACAAACAAAACAAACAGCAACAACAACAAAAAAACAAAAA chr4 + 94230402 43491332 43491331 43491377 43491332 43491331 43491377 46 AAACAAACAAAACCAACAAACAACAACAACAACAAACAAATAGAAA ...........xxx........:.............x...:.:... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 78340991 NA +3163 chr4 + 190214555 121842254 121842253 121842313 60 AAAAAAAAAAAAAAAAAGAAAAAGAAAATTATTCTTTTATCTATCAATATTTTACTTTAT chr4 + 94230402 29876528 29876527 29876586 29876528 29876527 29876586 59 AAAAAAAAAAAAAAAACGAAAAAGCAAGTTTTGCTTTTGGGGATCAACATTTT-CTTTAT ................x.......x..:..x.x.....:xxx.....:.....-...... 53M1D6M 49/59 83.1% 59/94230402 0.0% 1/59 1.7% 91965726 NA +3155 chr4 + 190214555 121851352 121851351 121851412 61 GGGGTAGCCCTGTTCTGCAAGGAGCAGGAAAAAAAAAAAAAAGAAAGGAAAAAAGGAAGGA chr4 + 94230402 48078738 48078737 48078794 48078738 48078737 48078794 57 GGGGCAGCACAG----GCAGGAAACAGGAGAAAAAAAAAAAAGAAGGGTTGAAAGGAAGGA ....:...x.x.----...:.:.:.....:...............:..xx:.......... 12M4D45M 46/57 80.7% 57/94230402 0.0% 4/57 7.0% 73772614 NA +3870 chr4 + 190214555 121851406 121851405 121851498 93 GGAAGGAAGGAGGGAAGGAGGGAAGGAGGGAAGGGAGGGAGGGAGGGGAAAAGAAAGGGAAGAA---------------------------AGGGAGAAAGGAAGAAAGAAAGAAAGAAA chr4 + 94230402 1500702 1500701 1500821 1500702 1500701 1500821 120 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaa .....::.:..::.:x..:......:..x..:....:.....:.::::.x.:....:...::..---------------------------.:...:..x....:...:........... 64M27I29M 66/93 71.0% 120/94230402 0.0% 27/93 29.0% 120350704 69863851 +3523 chr4 + 190214555 121855649 121855648 121855871 223 TACTCTTAGTAACACCTAGAATAAAATTGCTTTAAAAA--TTAGGTTACGAATACAACTTGCATTTGTTAGCAATTTTGCATATATCAACTGATTTGAAAACAACATATATACACATATATACGTATAAATGTATACATATATACGTATATATACAGATATGTACACACATGTATACATATATACACATATGTATACATATATGCACATGTATGTGTATATATGT chr4 + 94230402 55694340 55694339 55694508 55694340 55694339 55694508 169 TACTTTCATATGCATCTAATGGAACACTGCTTTAAAAAAATCAGTTTA-----AAAACTTG-------------TTTTACATATGTT---TTATTAGAGAATGGCTTCTCTTCACA-----------------------------------AGACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ....:.:.xxx:..:...:x:x..x.:...........--.:..x...-----.x......-------------....:.....:.:---.x...x..:..:::.x.x.x.x....-----------------------------------.x......::x:x:::x.x.....:....:........:...:..::.:...x.x......:....:.....:. 38M2I8M5D8M13D13M3D26M35D74M 115/167 68.9% 169/94230402 0.0% 58/167 34.7% 66161309 NA +3215 chr4 + 190214555 121855821 121855820 121855883 63 TACATATATACACATATGTATACATATATGCACATGTATGTGTATATATGTATATGTACATAT chr4 + 94230402 76709592 76709591 76709654 76709592 76709591 76709654 63 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ..:......:..::.:.x......x::..x...............x.:...x...:..:x.:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 45146229 NA +3584 chr4 + 190214555 121855912 121855911 121855986 75 ATATATGTGTACATGTACATGTGTATATGTATATGTACATATATATGTGTGTATATATATATATATAAAATGTAA chr4 + 94230402 46063299 46063298 46063373 46063299 46063298 46063373 75 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAA ...:............::...x.:.:....x:.....::.x.....:::.:...:xxx.......:..::..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 75792613 NA +3481 chr4 + 190214555 121890862 121890861 121890933 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCACTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.xx..x..........::.:..x.xx:.::..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 45857656 NA +3123 chr4 + 190214555 121921898 121921897 121921937 40 TTGTTTTTTGGGTTTTTTTTTGTTTTTTTTTTTTTTTTCG chr4 + 94230402 79835328 79835327 79835367 79835328 79835327 79835367 40 TTGTTTTTTGGGGTTTTTTTTGTTTTTTTTTTTTTCTCTG ............x......................:.::. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 42086570 NA +4739 chr4 + 190214555 121955749 121955748 121955846 98 GACTTTGAGAAAGCTACTTAACCTCTCCGAGCCTCAGTTTTTCCCTCAGTAAAATGAAGAT-ATAGTCGTTGTACCTACTTCATAGGGGTGTTATAAGG chr4 + 94230402 83501141 83501140 83501237 83501141 83501140 83501237 97 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAAT--TACCTACCTCACAGGGGTATTGTGAGG ....:..:.x..::..........x.x:.x...........:..x:.x........:..x.-.....x:.--.......:...:......:..:.:... 61M1I8M2D27M 74/96 77.1% 97/94230402 0.0% 3/96 3.1% 38454608 NA +3055 chr4 + 190214555 121963622 121963621 121963695 74 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTAGAACCTGAGAGGCGGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........:.::........x.xx.x...x::..x.....::::..x:xx:..:..... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 45930418 NA +3349 chr4 + 190214555 121971466 121971465 121971521 56 AGAAATTCTTCTTTATGTAAATATATATACACATACACACACACACACACATGTGC chr4 + 94230402 43671838 43671837 43671893 43671838 43671837 43671893 56 AAAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCAC .:...:.:....:.:.x..x.:..:.........:..........x.......::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 78299628 NA +3118 chr4 + 190214555 121971477 121971476 121971536 60 TTTATGTAAATATATATACACATACACACACACACACACATGTGCATGCATACACGCACA chr4 + 94230402 46140848 46140847 46140906 46140848 46140847 46140906 59 TTTGTGTAA-TATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...:.....-............:..x.x....:.......:...:..::.:.x..x:... 9M1D50M 46/59 78.0% 59/94230402 0.0% 1/59 1.7% 75830629 NA +3576 chr4 + 190214555 121981550 121981549 121981631 82 ATAGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCTGGGAGGTCAAGACTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.......--...x......:...........::........x:xx.x.:.x.:.....:..::.:..x.:x:.:...:.. 9M2D71M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 45948352 NA +3355 chr4 + 190214555 122025664 122025663 122025746 83 CATGGTGGCTCATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGACACAAGAATTTCTTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:x..:.--..................::........x.x::x...x:x........::.:.:x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 45992467 NA +3022 chr4 + 190214555 122029654 122029653 122029702 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCTGTTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x...:............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 69249192 NA +3626 chr4 + 190214555 122043905 122043904 122043986 82 CATGGTGGTCCATACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGTTGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::.....x..--.x....:.:...........::.:......x.xx.x...x.:...........:..:.xx:..:..:. 12M2D68M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 46010708 NA +3258 chr4 + 190214555 122137382 122137381 122137482 101 TGATTGATTTCTTTTTTTCTTTTTCTTTTTCTTTTCTT-TTTTATTTCTTTTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTGAGACAGTCTCACTTTGTTG chr4 + 94230402 59835395 59835394 59835496 59835395 59835394 59835496 102 TAATTAGCTGCATTTTTTTTTCTTGTTTCAAACTTCTTACTTTATTTCTTGTTTTCTCTTTTCTCTTTTTCCTGTTTACACTGGGAAAACTTTTTCTTGCTG .:...:::.x.x......:..:..x...:xxx:.....-:..........x....:......:.:..:..::.x...x:x:..:..x.:::.:x::...:.. 38M1I63M 64/101 63.4% 102/94230402 0.0% 1/101 1.0% 62301987 NA +3007 chr4 + 190214555 122137386 122137385 122137458 73 TGATTTCTTTTTTTCTTTTTCTTTTTCTTTTCTTTTTTATTTCTTTTTTTTTCTTTTTTTTTCTTTTTTTTTT chr4 + 94230402 58577646 58577645 58577718 58577646 58577645 58577718 73 TAATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT .:..:.:........:::x..x.x..:.:x.:.x:..:xx.x.........:..........:x...x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 63559740 NA +3610 chr4 + 190214555 122148367 122148366 122148425 59 GCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:.........:..:........x.xx.x...x...........:.:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 46115161 NA +3031 chr4 + 190214555 122170297 122170296 122170351 55 CTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAGAATAATCACATTCCTGTTATTT chr4 + 94230402 26392948 26392947 26393002 26392948 26392947 26393002 55 CTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACATTTTGGATACTT ...::.......................:.x.:x:x.........::x.x..:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 95777349 NA +3126 chr4 + 190214555 122183195 122183194 122183278 84 ACATGGTGACACGTGCCTGGGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCATGGAGATTGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::...:::.::.--..x:..:...........::........x:xx.x.:.x.......:..xx.:..x..x:.....:.. 15M2D67M 55/82 67.1% 82/94230402 0.0% 2/82 2.4% 46149999 NA +3319 chr4 + 190214555 122207450 122207449 122207536 87 GTGCATTTTAGGCAATTTTATAATTGAAATTTAATGGACATTAAAAGTAAATTTACTTTTTCTTCTTTTTTTTTTTTTTTTTCTTTT chr4 + 94230402 83357823 83357822 83357901 83357823 83357822 83357901 79 GTGCCTTTCAAGCAGTGCTGTAGTGCA--------GGATAGGTGAAGTAAATTTACTCTGCCTCCTTTTTTTTTTTTTTTTTTTGTT ....x...:.:...:.x:.:..:.xx.--------...:.xxx:.............:.x:..:..................:.x.. 27M8D52M 58/79 73.4% 79/94230402 0.0% 8/79 10.1% 38849627 NA +3003 chr4 + 190214555 122214594 122214593 122214634 41 TTTTTTTTTTTTTCAGTAAATTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 25763354 25763353 25763394 25763354 25763353 25763394 41 TTTTTTTTTTTTTCTGTAAAATCTGTTCTTTTTTTTTTTTT ..............x.....x...x..:............. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 96451240 93763315 +3065 chr4 + 190214555 122229711 122229710 122229810 100 TTTTTAAAAAATTGTCTATTTTTGTTTTTATTTTGTTTAACTTTTCTGTTCCCTTCTTGTCCCTTTCCCATTTTTTCCTTTTTTATTTCTTTTTCCTTTA chr4 + 94230402 29547366 29547365 29547465 29547366 29547365 29547465 100 TTTTTTATACATTTTCTTATTTTGCTACTACAGTATTAATAATTTCCCTCAGCTTCCTGATTTCTTCCTCTTTTCTTCATTTTTTTTTCTGTTTCCTTTA .....x.x.x...x...xx.....:.x:..:xx.:..x.xxx....:x.:xx....:..x::::....:x....:.:.x.....x.....x......... 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% 92682345 NA +3534 chr4 + 190214555 122237847 122237846 122237925 79 GTGGTGCGTGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--......:...........:x........x.xx.x...x.x.........:.:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 46204646 NA +3117 chr4 + 190214555 122255518 122255517 122255588 71 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGGTTGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:...........::........x.xx.x...x::x.......::.:..x:xx:.....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 46222311 NA +3558 chr4 + 190214555 122277217 122277216 122277283 67 TGTAGTCCCAGCCACTTGAGAGACTGAGTTGGGAGGATCACTTGAGCCCAAGAGGTCCAGGCTATAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.....:......:..:.....::xx.x.:.x.......:....::..x.:::....:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 46244006 NA +3031 chr4 + 190214555 122290794 122290793 122290847 54 AAAAAAAAAAAAAAAATATACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ............:.x.x.........xx:.x....:....::..x:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 66561301 NA +3123 chr4 + 190214555 122290796 122290795 122290849 54 AAAAAAAAAAAAAATATACACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ............:...x.:.......xx:.x....:....::..x:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 66561303 NA +3206 chr4 + 190214555 122290798 122290797 122290862 65 AAAAAAAAAAAATATACACACACACACACACACACACACACACACACACACATAATATTATATAT chr4 + 94230402 55729493 55729492 55729557 55729493 55729492 55729557 65 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACAGTGTCATCTGT ............x...x.:.......xx:.x....:....::..x:......:.:.:.:..x.:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 66561305 NA +3333 chr4 + 190214555 122321371 122321370 122321451 81 CTTATATTTAAGCATATATAAGCATATACATAAATGCGTGTGCACATATATACACACACATATATACACATGCACACACAT chr4 + 94230402 55049658 55049657 55049729 55049658 55049657 55049729 72 CTTCTTTCTAGGCATGTATAA---------CGTATGTGTGTTCACATATATATACACCCATGTGTATACATGGTCACACAT ...x.x.:..:....:.....---------::x...:....x..........:....x...:.:..:.....xx....... 21M9D51M 55/72 76.4% 72/94230402 0.0% 9/72 12.5% 67271713 NA +3054 chr4 + 190214555 122321398 122321397 122321455 58 ACATAAATGCGTGTGCACATATATACACACACATATATACACATGCACACACATTTAT chr4 + 94230402 68837093 68837092 68837150 68837093 68837092 68837150 58 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ..:.:x::.:.....::::..:.:...x.:.....:...............:x..... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 53484305 NA +3152 chr4 + 190214555 122322000 122321999 122322090 91 TTTTTTTTTTTTTTTTGGCATTTATCCTGCTTGGTGTTCTTTGAGCTTCCTCTATCTGTGGTTTGGCATCTGACAACAATTTGAGAAAACT chr4 + 94230402 48608892 48608891 48608982 48608892 48608891 48608982 91 TTCATCTTTTTTTTCTGGGATTTATTCAGTTTGGAGGTATTTGAGGGTGATCTACCTCCATTTGGTCAGCAAACTGTAATTCAGGAAAACT ..:x.:........:...x......:.x.:....x.x.x......xx.xx....:..x::x..x.x..x.x:..x::....:::....... 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 73713108 NA +3039 chr4 + 190214555 122355569 122355568 122355659 91 GTATATATATAAATATATGTATATATACATATGTATATATATACATATGTGTCCATGTATATGTATATATCTGTATACATAGATATATGTA chr4 + 94230402 89812967 89812966 89813057 89812967 89812966 89813057 91 GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA .:.....x........:.......x..x..::x.xx...:..::::.x::x:.....::.....x:x.:.x...:.:::..x....:.x.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 32542602 NA +3096 chr4 + 190214555 122378146 122378145 122378215 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 46344949 NA +3740 chr4 + 190214555 122416602 122416601 122416675 74 GCATACCTGGAGTTCCAGCTATTTGGGAGGCTGAGACAGGAGGATCACTTGAACCTAGGAGTTTGAAGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..x..x...........:...::........x.xx.x.:.x..........:..:..:..x::....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 46383398 NA +3101 chr4 + 190214555 122422946 122422945 122422999 54 TATTTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGG chr4 + 94230402 30583644 30583643 30583697 30583644 30583643 30583697 54 TATTGCTCTTTCAAAAATTTAAAAGGAAAAAAATAAAAAAGAAGAAGAAAAAGG ....x......x.....xxx....::.......x:..:...........:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 91839302 NA +3023 chr4 + 190214555 122431941 122431940 122431994 54 AAATGCATTATATTTGGAAATAATAAAGATTAGAGATGAATTGTGTTCAAGATT chr4 + 94230402 45256869 45256868 45256922 45256869 45256868 45256922 54 AAATGTATTATTTTTGGAAATAATAAAATTTGAAGATAAAGTATGCTTAAACTT .....:.....x...............:x..::....:..x.:..:.:..:x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 77175072 NA +3122 chr4 + 190214555 122436214 122436213 122436260 47 CTTTTTTTGTTTTTTTTTTGTCTGTTTGTTTATTTTTTGAGACAGAG chr4 + 94230402 29671946 29671945 29671992 29671946 29671945 29671992 47 CTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGGGGGGAG ...x.....x...........:.........:.......:.:x:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 92764268 NA +3070 chr4 + 190214555 122474951 122474950 122475036 86 TTTTTACCCTGTTTTTTTCTAGTAGCTTTACAGGTTCAGATCTTATATTTAAGTCTTTAATCCATTTTAAATTTATTTTTATATAT chr4 + 94230402 28211677 28211676 28211762 28211677 28211676 28211762 86 TTTTTTTCCTGTTTGTTTCTGATTGCTTTTCAGGCTTCAATATTTTGTTTTGATCAGGAATCCTTTATGAGTCTACTCTACTATAT .....x:.......x.....::.x.....x....:.:x:..x..x.:...x::..xxx.....x..x.:.:.:..:.:.xx..... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 94263274 NA +3473 chr4 + 190214555 122477280 122477279 122477340 61 GTTGTTTATTTGAGATCTTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 44980298 44980297 44980356 44980298 44980297 44980356 59 GTAGTTCATTTGG--CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAA ..x...:.....:--:...:...:.........:x.:............:.........:. 13M2D46M 48/59 81.4% 59/94230402 0.0% 2/59 3.4% 77496982 NA +3125 chr4 + 190214555 122477285 122477284 122477344 60 TTATTTGAGATCTTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGAGACA chr4 + 94230402 41644366 41644365 41644425 41644366 41644365 41644425 60 TTATCTGAGATGTTTCCTCTTCTTCGTGTTTTTTTTTTTTCCTCATTTATCTTCGAGGTA ....:......x....:........x.x..:..:......::.:x...x.:..:...::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 80832919 NA +3694 chr4 + 190214555 122478193 122478192 122478300 108 TATTTTATTGCTGTCTGTTTCTCCCGTCCTGTCAATTTT-TTAAATAAATATTTAGGTGCTCTGATTATGTTTGGTGCATATGTGTGTGTGTGTGTGTGTATATATATA chr4 + 94230402 14905571 14905570 14905679 14905571 14905570 14905679 109 TACTTTATTTCTCTCTTTACTTTCTGTCATTTCCATCCAATTTAATGACCCGTTATGTGAGGTGCTTATGTATGATGCATCTGTGTGTGTGTATATATGTACATAAATA ..:......x..x...x.x::.:.:...x.x..x..::x-..x...:.x:xx...x...xxx..x......x..:.....x...........:.:.:....:...x... 39M1I69M 74/108 68.5% 109/94230402 0.0% 1/108 0.9% 107572622 82641933 +3456 chr4 + 190214555 122478256 122478255 122478343 88 ATTATGTTTGGTGCATATGTGTGTGTGTGTGTGTGTATATATATATGTTTATAATTATTATAAGCTTTTGATGAATTGACACACATCG chr4 + 94230402 72529258 72529257 72529341 72529258 72529257 72529341 84 ATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTT----TTCTAGTGAAATTTTACTATAATGACACACTTTG ....::...x:.:..::.................::.........x.x..----..x.x:.:.:x....:x.:x.x........x.:. 50M4D34M 60/84 71.4% 84/94230402 0.0% 4/84 4.8% 49948998 NA +3456 chr4 + 190214555 122478256 122478255 122478343 88 ATTATGTTTGGTGCATATGTGTGTGTGTGTGTGTGTATATATATATGTTTATAATTATTATAAGCTTTTGATGAATTGACACACATCG chr4 + 94230402 72525685 72525684 72525768 72525685 72525684 72525768 84 ATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTT----TTCTAGTGAAATTTTACTATAATGACACACTTTG ....::...x:.:..::.................::.........x.x..----..x.x:.:.:x....:x.:x.x........x.:. 50M4D34M 60/84 71.4% 84/94230402 0.0% 4/84 4.8% 49952571 NA +3218 chr4 + 190214555 122503595 122503594 122503676 82 ATTTCTCTCTCTGTCTCTCTCTCTCTCTGTATGTATGTATTTATATGGAGACACAAGTAAGCTGTTTCCTAAAACATTAATA chr4 + 94230402 60831527 60831526 60831599 60831527 60831526 60831599 73 aTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA---------CTTCTAAATACATTTATA ..x...x...................x.....:.....:.x..:.::x.x:....---------:...:x..x.....x... 55M9D18M 56/73 76.7% 73/94230402 0.0% 9/73 12.3% 61672068 NA +3181 chr4 + 190214555 122508729 122508728 122508796 68 ATCCTTATA---GCCACCCTCATAATTAGATATTACTATGGCCATTTTATAAACAAACAAACAGAAAAACC chr4 + 94230402 65239455 65239454 65239525 65239455 65239454 65239525 71 ATCTTCATATCAGTCAACCTCAGAAGCAGATATTGCTACATAAATTAAATAAACAAACAAACAAAAAAACC ...:.:...---.:..x.....x..x:.......:...::xxx...xx...............:....... 9M3I59M 52/68 76.5% 71/94230402 0.0% 3/68 4.4% 57269274 NA +4388 chr4 + 190214555 122580987 122580986 122581213 227 AGAAAAAGAGAAAGAGATTGAGAGAGGA-AGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA-GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAGAGAGAAAGGGAGCGAAAGAGAAAGAAATAAATTTAAGTTAAAAGGAGAAACCTTTTTTTTTTTTTTTGCTCTGTTTGTCAAAGGTTAAAAACATGACT chr4 + 94230402 17246070 17246069 17246293 17246070 17246069 17246293 224 AGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGA--GCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAG---ATGTTGGCGGGGGAGACAGGGTTCTTTTGTTTGTTTTTGTTTGTTTAAGAATTAAAAAATGTCT ..x.:..........:.x.......x.x-....:.x..::x.x..--.xx..::x.:.:.xx...:..........:.::.:xx.x-..::.....:....x..:.x..x......::...x.:xx.xx.xxx.xx.:x.:::x......x...:x:.x..:---.x...::x:..:..:..xxxx..:....x...xx:.:.......:x...:x.x....x...x.. 28M1I16M2D39M1I75M3D64M 137/222 61.7% 224/94230402 0.0% 7/222 3.2% 105334917 84879638 +3323 chr4 + 190214555 122614576 122614575 122614636 61 GTGCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTGGGAGG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x..................::........x.xx.x...x::.......:x:..:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 46581372 NA +3531 chr4 + 190214555 122618675 122618674 122618748 74 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........:.::........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 46585471 NA +3167 chr4 + 190214555 122686524 122686523 122686619 96 CTCCAAGACTCAGAAATACTTTTGAACGTTCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGGACTTA--CATATGCACA chr4 + 94230402 39131720 39131719 39131817 39131720 39131719 39131817 98 CCTTAAATCCCATCAACCCATTCAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:::..:x.:..xx..:x.x..::.:....::..:.::x......x...x.x.......:x.....::.....x.:x...x.:...--.....::... 86M2I10M 62/96 64.6% 98/94230402 0.0% 2/96 2.1% 83554804 NA +3010 chr4 + 190214555 122689265 122689264 122689314 50 GTAAAATATGTATGTGTGTATATATATATGCATGCACACACACATATATA chr4 + 94230402 49483582 49483581 49483631 49483582 49483581 49483631 50 GTAAAGTGTGTATGTGTTTATAAATACATGCACACACACACGCACGCGTA .....:.:.........x....x...:.....::.......:..::::.. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 73205683 NA +3095 chr4 + 190214555 122707034 122707033 122707069 36 TTTTGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 68982956 68982955 68982991 68982956 68982955 68982991 36 TTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ....:...:........................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 53724078 NA +3152 chr4 + 190214555 122707035 122707034 122707070 36 TTTGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 17384409 17384408 17384444 17384409 17384408 17384444 36 TTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ..x................................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 105322626 84891929 +3346 chr4 + 190214555 122707039 122707038 122707107 69 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTCAGAGAGA-GAGAGATGGGGCCTTGCTATGTT chr4 + 94230402 759691 759690 759760 759691 759690 759760 70 TTTTGCTCTCGCTCTTTTTCTTTCTTTTTTTTTTTCTTCAGAGAGGCAAGAAATGGAAATATGTTATTTT .:.:x.....x....:...:...:...........:.........:-:...:....::x:x..:...x.. 46M1I23M 51/69 73.9% 70/94230402 0.0% 1/69 1.4% 121947348 68267207 +3028 chr4 + 190214555 122716509 122716508 122716582 74 AAGATATCTTCAAATTATATTTATATATACATATGTGTATATATACACATATGTATATATAAACATATGTATAT chr4 + 94230402 92344698 92344697 92344771 92344698 92344697 92344771 74 AATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ..x..x.x.x....x.....x:.:.x..x.......:.....:......x.x.:.:xxx.:x............ 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 30371811 NA +3028 chr4 + 190214555 122716509 122716508 122716582 74 AAGATATCTTCAAATTATATTTATATATACATATGTGTATATATACACATATGTATATATAAACATATGTATAT chr4 + 94230402 92341557 92341556 92341630 92341557 92341556 92341630 74 AATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ..x..x.x.x....x.....x:.:.x..x.......:.....:......x.x.:.:xxx.:x............ 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 30374952 NA +4030 chr4 + 190214555 122716527 122716526 122716642 116 ATTTATATATACATATGTGTATATATACACATATGTATATATAAACATATGTAT--ATATACACATATGTATGTATACACACATGTGTGTATATGCACATACACATATGTATATACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATG--TGTATGAATATGCATGCACAC ....::x.......:.....x.x.:.:x:.:...x.....:..xx..:..:..:--:.:...x:...:.......:x..::.x.x..........--::..::x.....:..::.... 54M2I39M2D21M 77/114 67.5% 116/94230402 0.0% 4/114 3.5% 101607340 88607215 +3245 chr4 + 190214555 122716666 122716665 122716715 50 CATATGTGTATATATACACATATGTGTATGTGTGTGTATACATACACATA chr4 + 94230402 27759112 27759111 27759161 27759112 27759111 27759161 50 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA .......:.x..:.x..............:..::........::....:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 94957554 NA +3221 chr4 + 190214555 122716690 122716689 122716807 118 TGTATGTGTGTGTATACATACACATATGTGTGTATATACACACACACGTGTGTGTGTATATATATAATTTCCCTGGTAATTCAATGGCTACATTTCAAATAGTGTCAGATTTGGTTTT chr4 + 94230402 55694448 55694447 55694549 55694448 55694447 55694549 102 TGTTCTTGTATGCATACATACAC--ATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT----------TGTTGAGAAAATTGCCGTA----AAATAGCTCAAGGTTTGTTTTT ...x:x...:..:..........--..........:.::.:x.x..:..::............----------..x.:.xxx...x..:::.----......:x:x..:....x.... 23M2D38M10D19M4D22M 73/102 71.6% 102/94230402 0.0% 16/102 15.7% 67022242 NA +3308 chr4 + 190214555 122759586 122759585 122759628 43 ATTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACCCCCA chr4 + 94230402 75248046 75248045 75248088 75248046 75248045 75248088 43 ATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:..::...............................x.x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 47511540 NA +3012 chr4 + 190214555 122763515 122763514 122763561 47 TACTTTGGGTTTTTTTGTTGTTGTTTTTTGTTGTTTTTTTTTTTTTT chr4 + 94230402 42595716 42595715 42595762 42595716 42595715 42595762 47 TACTCTGGATTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTT ....:...:................x:.xx:.x.............. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 80167799 NA +3030 chr4 + 190214555 122763518 122763517 122763568 51 TTTGGGTTTTTTTGTTGTTGTTTTTTGTTGTTTTTTTTTTTTTTGACACTG chr4 + 94230402 18999246 18999245 18999296 18999246 18999245 18999296 51 TTTAGGGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTTCTCTGATATCG ...:..x...............x..:x..x..........:.:...:.::. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 103764272 86450283 +3057 chr4 + 190214555 122763518 122763517 122763558 41 TTTGGGTTTTTTTGTTGTTGTTTTTTGTTGTTTTTTTTTTT chr4 + 94230402 12176242 12176241 12176282 12176242 12176241 12176282 41 TCTGGGTTTTTTTGTGTGTGTTTTTTGTTGTTTTTTTTTTT .:.............xxx....................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 110587276 79627279 +3555 chr4 + 190214555 122769755 122769754 122769836 82 GTGGTGACACACACCTGTAGTCCCAGCTACTCAGGATGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::.x......x.xx.x...x.............:..x.xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 46736554 NA +3200 chr4 + 190214555 122770122 122770121 122770180 59 AAAATCTTTAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAATCAAATGATTTCTGCATA chr4 + 94230402 5626149 5626148 5626207 5626149 5626148 5626207 59 AAAATATCAAATTGTAAAGCAAAGAAAGAAAAAAAAAAAAATCAAAGCAACTCTGTTTA .....x.:x.........:x...:...:..................xx.x:....:x.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 117143973 73070582 +3526 chr4 + 190214555 122771255 122771254 122771347 93 ACATGGTGGCAGGCACCTGTAGTCCCAGCTACTCGTGAGGCTGAGGCAGGAGAGTCACTTGAACCCGGGAGGTGGAGGTTACA----ATGA-GCCAAG chr4 + 94230402 76033196 76033195 76033291 76033196 76033195 76033291 96 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ...::....:--....x......:.........:.x:........x.xx.x..:x...........:.:..x.xx:..:.::.----....-...... 10M2D71M4I4M1I6M 68/91 74.7% 96/94230402 0.0% 7/91 7.7% 46738059 NA +3602 chr4 + 190214555 122782878 122782877 122782947 70 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:.--....:.:...........::........x.xx.x...x.:...........:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 46749681 NA +3654 chr4 + 190214555 122784978 122784977 122785060 83 CATTGTGGTGGGCAACTGTAATCCCAGCTACTTGGGAGGCTGAGTCACGAGCATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x......--..xx....:.:...........::........:.x:.x.x.x.............:..x:xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 46751781 NA +3429 chr4 + 190214555 122792033 122792032 122792115 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTGAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGAAGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.........x:::........x.xx.x...x..........::.:..xxxx...:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 46758836 NA +3096 chr4 + 190214555 122801239 122801238 122801308 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 46768042 NA +3137 chr4 + 190214555 122801620 122801619 122801677 58 CACCTATAGTCCCAGCTACTTGAGAGACTGAGACAGGAGAATCGCTTGAGCCTGGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x.:....:............:..:.....x.xx.x...x.:.....:..::.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 46768413 NA +3385 chr4 + 190214555 122802878 122802877 122802948 71 CATGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCTCTTGAACCAGGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::.........:--....:.:...........::........x:xx.x...x.x........x:..:.. 14M2D55M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% 46769681 NA +3298 chr4 + 190214555 122806666 122806665 122806723 58 CACTTGTAATCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x....:.:...........x:........x.xx.x...x.........:.:.:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 46773459 NA +3364 chr4 + 190214555 122844481 122844480 122844583 103 ATGGCATCTAGAATTGTCAGTTATTTCCAGAAGGTTTTCTTTCTTTCTTTTTCTTTTTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTTTCTTTCTTTC chr4 + 94230402 56107859 56107858 56107958 56107859 56107858 56107958 100 ATGGCATC---GTTTTCCTTTTATTTCCGTAAGACTGCCTTGTTTTCATTTCTTCACCTGATACCTTTCTGGCACTTTCCTTTTCTTTCTTATTCCTTCTTTC ........---:x..x:.xx........:x...::.x:...x:....x...::.:x::.xx.x:......xx.x....:::..........x...:....... 8M3D92M 67/100 67.0% 100/94230402 0.0% 3/100 3.0% 66736622 NA +3247 chr4 + 190214555 122844529 122844528 122844614 86 TTTTCTTTTTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 86491058 86491057 86491143 86491058 86491057 86491143 86 TTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTC ...:xx......:...:...:....xxxx..:.::..:.x.x......:.:.:.:...:..:.::..::..:..:x.::....:.. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 36353471 NA +3128 chr4 + 190214555 122844536 122844535 122844579 44 TTTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTTTCTTTC chr4 + 94230402 68448597 68448596 68448640 68448597 68448596 68448640 44 TTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTC ...:..:.:.::.x...:.......................... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 54395939 NA +3620 chr4 + 190214555 122844575 122844574 122844662 88 CTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCTTTTTTTTTGACTGG chr4 + 94230402 69568192 69568191 69568279 69568192 69568191 69568279 88 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTGGCTGG .....:..x:.x..:xx..x:.....:.:..x::..::::..x...:.:.....:x....xx.::...:...:..........:.... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 53276383 NA +3016 chr4 + 190214555 122865259 122865258 122865311 53 TTTATTTTCTCTGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTGTTGTTGTTGA chr4 + 94230402 36924987 36924986 36925039 36924987 36924986 36925039 53 TTCAGTTCATCCTACCTTTTTTGTTTGTTTGTTTGTTTTGCTGCTGTTGTAGA ..:.x..:x..:xx::........................:..:......x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 85940272 NA +3043 chr4 + 190214555 122865271 122865270 122865305 35 GTTTTTTTTTGTTTGTTTGTTTGTTTTGTTGTTGT chr4 + 94230402 89314595 89314594 89314629 89314595 89314594 89314629 35 GTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGT ..............................x.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 33550676 NA +3201 chr4 + 190214555 122971277 122971276 122971348 72 TGCACCTGTAGTCCCAGCTACTTGTGAGGCTGAGGTAGGAGGATTACTTGAGTGTGGGAGGTTGAGGCTATA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....x......:...........x:........x:xx.x.:.x:......::x::.:..x..x:....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 46938072 NA +3097 chr4 + 190214555 123007496 123007495 123007617 122 TTCTTCTTTCTTGCCTATTAAATTCTCCATGCCTATATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325438 27325437 27325556 27325438 27325437 27325556 119 TTTCTCCTTCTGTCCTCCAGAATGTTCTCTTTCT---CATTTAGAGCTGAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..::..:....xx...x:x:...x:..:x.x:..---:..x..x.xx..x:x.x.x:..:..:..xx......:::x..x::x.:x:.:...........:.........::...:...... 34M3D85M 73/119 61.3% 119/94230402 0.0% 3/119 2.5% 95682058 NA +3474 chr4 + 190214555 123007521 123007520 123007640 120 TCCATGCCTATATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACA chr4 + 94230402 68837024 68837023 68837143 68837024 68837023 68837143 120 TTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .:....:x......:...:..:::..:x..:::::::::.::x.xx:.x.x:xx.:x..x:xx..:x.x::.....:.............:.:.:.x...:...:...:...::...... 120M 69/120 57.5% 120/94230402 0.0% 0/120 0.0% 54170497 NA +3165 chr4 + 190214555 123007530 123007529 123007594 65 ATATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 5214252 5214251 5214316 5214252 5214251 5214316 65 ACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .:.:.:..x..:.......:..x..::........:::.x::.........::..::x:...... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 117793278 72421277 +3101 chr4 + 190214555 123007532 123007531 123007623 92 ATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....x...x:.:.:.....:.x.:x:..:x.xx...::....::x::x:x::..:..:...x:x...................:.x..x.. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 33194563 NA +3431 chr4 + 190214555 123007535 123007534 123007635 101 TATATATGTGTATGTATGTGTGTGTGTGTGTAT--------ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ....:......:.x.x....x.:..:.x.:...--------..:.::x:....::x.:.::..:...::x::..:x.x.........:.:...:x....::..:..... 33M8I68M 65/101 64.4% 109/94230402 0.0% 8/101 7.9% 101898341 88316214 +3043 chr4 + 190214555 123007550 123007549 123007615 66 ATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:..:..xx...:..:.:x..x::x.:x:.:...........:.........::..::...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 95682059 NA +3093 chr4 + 190214555 123007558 123007557 123007630 73 GTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATA chr4 + 94230402 39131745 39131744 39131817 39131745 39131744 39131817 73 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:..x....::::x......x...x.x.......:x.....::.....x.:x..::..x...x:.......:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 83875813 NA +3670 chr4 + 190214555 123007560 123007559 123007652 93 GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACACAC chr4 + 94230402 39131745 39131744 39131836 39131745 39131744 39131836 92 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA-ACGCTCACTATGTGCACAC .:..x.:..:.::x......x...x.x.......:x.....::.....x..x..::..x...x:.........-..:.x...x.::::..... 73M1D19M 64/92 69.6% 92/94230402 0.0% 1/92 1.1% 83875815 NA +3976 chr4 + 190214555 123007561 123007560 123007642 82 TGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:.x:..x.....x.................:.xx:...:x.::.:::...:..x...:..:.x...::.....:....... 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 37173028 NA +3081 chr4 + 190214555 123007562 123007561 123007654 93 GTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACACACAC chr4 + 94230402 39131745 39131744 39131836 39131745 39131744 39131836 92 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATAC-AACGCTCACTATGTGCACAC .:..x.:.::.::x......x...x.x.......:x.....::.....x..x..::..x...x:.....:..-x..:.x..x:.::::..... 72M1D20M 60/92 65.2% 92/94230402 0.0% 1/92 1.1% 83875817 NA +3538 chr4 + 190214555 123007563 123007562 123007636 74 TGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...:.x.................:.xx:...:x.::.:::.:...:x...:..:.x...::.:.:......... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 37173022 NA +3847 chr4 + 190214555 123007565 123007564 123007642 78 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 85834533 85834532 85834610 85834533 85834532 85834610 78 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x::.x.....x.................:.xx:...:x.::..:....:..x...:..:.x..::......:... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 37173032 NA +3534 chr4 + 190214555 123007567 123007566 123007644 78 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAAC chr4 + 94230402 85834541 85834540 85834618 85834541 85834540 85834618 78 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC .:...x.................:.xx:...:x.::.:::.:.:..x...:..:.x...::.:...:.......:::. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 37173026 NA +3808 chr4 + 190214555 123007567 123007566 123007649 83 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT-ACACACA ...x::.x.....x.................:.xx:...:x.:...:....:..x...:..:.x:.::......:-....... 75M1D7M 60/82 73.2% 82/94230402 0.0% 1/82 1.2% 37173034 NA +4041 chr4 + 190214555 123007568 123007567 123007642 75 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 85834538 85834537 85834612 85834538 85834537 85834612 75 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ..x.....x.................:.xx:...:x.::.::....:..x...:..:.x...:......:..... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 37173030 NA +3165 chr4 + 190214555 123007570 123007569 123007660 91 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACAC-ACACACACAC chr4 + 94230402 39131745 39131744 39131836 39131745 39131744 39131836 92 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTATGTGCACAC .:..x...::.::x......x...x.x.......:x....::..:.:.x..x..::..x..:x..:.:.:.....:.x...-.::::..... 81M1I10M 59/91 64.8% 92/94230402 0.0% 1/91 1.1% 83875825 NA +3481 chr4 + 190214555 123007577 123007576 123007651 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACAC-ATACACACA .....x.................:.xx:...:x::...:....:..x...:..::x:.::.....-.:....... 65M1D9M 54/74 73.0% 74/94230402 0.0% 1/74 1.4% 37173036 NA +3481 chr4 + 190214555 123007579 123007578 123007653 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACAACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCAC-ACATACACACA .....x.................:.xx:....x::...:....:..x...:.:::x:.::...-...:....... 63M1D11M 54/74 73.0% 74/94230402 0.0% 1/74 1.4% 37173038 NA +3161 chr4 + 190214555 123007580 123007579 123007638 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx...:....:...:.::.:.::.:.::..x...:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 43742061 NA +3545 chr4 + 190214555 123007582 123007581 123007662 81 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACA----------CACAACACACACACACACACACAC chr4 + 94230402 79265519 79265518 79265609 79265519 79265518 79265609 91 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC .............::........xx........:...:.::.:.::.:..:..x...----------........x:x:.:.:.x.::... 57M10I24M 58/81 71.6% 91/94230402 0.0% 10/81 12.3% 43742063 NA +3414 chr4 + 190214555 123007584 123007583 123007642 59 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx.:......:...:.::.:.::....:..x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 43742065 NA +3496 chr4 + 190214555 123007586 123007585 123007642 57 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 79265519 79265518 79265575 79265519 79265518 79265575 57 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACA .............::........xx.:......:...:.::.:.:.....:..x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 43742067 NA +3104 chr4 + 190214555 123007596 123007595 123007639 44 GTGTGTGTGTGTGTATATATATATATATATATATACACACACAC chr4 + 94230402 24295791 24295790 24295834 24295791 24295790 24295834 44 GTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACAc ....................:......xx..x..:..:...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 98711805 91502750 +3016 chr4 + 190214555 123017147 123017146 123017215 69 GAGGGGGGAGAGGGAAGGGGAGAGGGAGAGGGGGGAGAGGGAAAGGGAGAGGGAGAGGGAGAGAGAGAG chr4 + 94230402 73744721 73744720 73744789 73744721 73744720 73744789 69 GAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ..::::.:.::..:.......:..:..:.:....:.:....:::...x.:..x..:..x:..:..x:.. 69M 43/69 62.3% 69/94230402 0.0% 0/69 0.0% 49272426 NA +3040 chr4 + 190214555 123017382 123017381 123017447 66 TCTTCATAGAATGTGTCTTTACAGCATGGGAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 77204300 77204299 77204365 77204300 77204299 77204365 66 TTTCCACTGAAGATGTGGTTTCAGTATGAGAGGTTGCTATTTTTTTCTTTTTTTTTTTTTTCATTT .:.:..:x...x:...xx..x...:...:..::..x:.x.......:..............:x... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 45813082 NA +3016 chr4 + 190214555 123017412 123017411 123017478 67 AAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCACTATATACAGCTAATGGCTTTT chr4 + 94230402 38227048 38227047 38227114 38227048 38227047 38227114 67 AAATGTTTTTTCCCTATGTCTTTTTTTTTTTTTTTTTGCTAATTTGTTTCTAATGCTATTGGCTTTT ....x......:::.x.x.:....................xx.:xx.x.x..xx....x........ 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 84790364 NA +3359 chr4 + 190214555 123021183 123021182 123021331 149 GTACCTTT----CCCAAGCTAGTTATTTAAGCTTTTTTTAAAAAAAAATTTTAATGATTT---------TTGAAATGGACTCTTTGAGCTTTTTTTTTTTCTTTTTTTACCTTTTCCCTTTTTA-----AGATTTTTATTCTTACCTA------TTAGGAAGACAACAAGGTA chr4 + 94230402 87813421 87813420 87813589 87813421 87813420 87813589 169 gtcccttttcaacccaggccagtctatgattctgtTTATTAGGAAG----TTAATGACTAACATGAGAACTGAAATTACCTTTTAAAGCCTTTTTTTTTTTTTTTTTTTCCCCTTCCCCTTTTGGTTATAGAAATTCTATGTTACCTAGAAATCTTAGGTGAACACTGAAGTA ..x.....----....:..:...:xx.x.xx..x...x.x.::..:----.......:.x---------:......x:x..:..x:...:..........:.......x..::.....:....:-----...xx..:xx.x.......------.....x::...x::.:... 8M4I34M4D10M9I55M5I19M6I19M 101/145 69.7% 169/94230402 0.0% 28/145 19.3% 35207762 NA +3568 chr4 + 190214555 123041420 123041419 123041546 127 CTATGATTATTCTTTTCATGTATCTGTCTCCTAATTAGCCTCAAATATTGATTTTTAGACTATGTATAATCTATTACTCTGAAACAGTTTTTTGGGGTTTTTTTGTTTGTTTGTTTTTGTTGTTTTT chr4 + 94230402 76177750 76177749 76177866 76177750 76177749 76177866 117 CTGTGATCTCTCCTTGAATAGTTCTGTC-AGTAACT-GTCTTAGATATTG--TTTCAAGCGATG------CTGTTGTGCTGTTAGAATTATGTGGGGCTTTTTTGTTTGTTTGTTTTCATTGCTTTT ..:....:x:..:..xx..:xx......-xx...:.-.:..:.:......--...:.::.x...------..:..::x...xx.x.:..x.x.....:...................::...:.... 28M1D7M1D13M2D12M6D57M 83/117 70.9% 117/94230402 0.0% 10/117 8.5% 46863670 NA +3568 chr4 + 190214555 123041420 123041419 123041546 127 CTATGATTATTCTTTTCATGTATCTGTCTCCTAATTAGCCTCAAATATTGATTTTTAGACTATGTATAATCTATTACTCTGAAACAGTTTTTTGGGGTTTTTTTGTTTGTTTGTTTTTGTTGTTTTT chr4 + 94230402 76174195 76174194 76174311 76174195 76174194 76174311 117 CTGTGATCTCTCCTTGAATAGTTCTGTC-AGTAACT-GTCTTAGATATTG--TTTCAAGCGATG------CTGTTGTGCTGTTAGAATTATGTGGGGCTTTTTTGTTTGTTTGTTTTCATTGCTTTT ..:....:x:..:..xx..:xx......-xx...:.-.:..:.:......--...:.::.x...------..:..::x...xx.x.:..x.x.....:...................::...:.... 28M1D7M1D13M2D12M6D57M 83/117 70.9% 117/94230402 0.0% 10/117 8.5% 46867225 NA +3529 chr4 + 190214555 123041512 123041511 123041567 56 TGGGGTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTGAGACGGAGTTTCGCTCTT chr4 + 94230402 88153961 88153960 88154016 88153961 88153960 88154016 56 TGGGTTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTTTAAGAAGGTTTCAGTCTT ....x................................xx:.x:::.....:x.... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 34887551 NA +3302 chr4 + 190214555 123054589 123054588 123054647 59 GCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........:.........x.xx.x...xx::x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 47021383 NA +3360 chr4 + 190214555 123058485 123058484 123058567 83 CGTGGTGGTGGTTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--::.x....:.............::........x.xx.x...x::.....:.....:..x.xx:..:..::. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 47025288 NA +4183 chr4 + 190214555 123067377 123067376 123067459 83 CATGGTGGCGCACACCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGTGTAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:....:--......:.........:..:........x.xx.x...x.:.........:.:..x.x.:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 47034180 NA +3027 chr4 + 190214555 123079699 123079698 123079763 65 GAAAATATTTGACACAGTTAACTCCAGCTTTTTTTTTCTTTTCCTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 55680045 55680044 55680109 55680045 55680044 55680109 65 GAAAACAACTGGCAATTTTTAATTCACATCTACTTTTCTATTCCCTCTTTTTTTTTTTTTTTTTT .....:.x:..:..xxx..x.x.:..xx.:.x:......x....:.................... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 67399654 NA +3122 chr4 + 190214555 123084585 123084584 123084631 47 TATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAAAGAG chr4 + 94230402 27325518 27325517 27325564 27325518 27325517 27325564 47 TAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAG ..x..............:.........::...:......:x...x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 95759067 NA +3210 chr4 + 190214555 123095031 123095030 123095085 55 AAAAAAAAAAAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTATA chr4 + 94230402 60568559 60568558 60568613 60568559 60568558 60568613 55 AAAAAAGAAAAACAGTGGTTATACATATATATCTCTGTGTGTGTGTATGTGTATA ......:.....xx:.:xx....:........x.x...........:........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 62526472 NA +3410 chr4 + 190214555 123095038 123095037 123095110 73 AAAAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTATATATATATATA---TATATCTTTTATCCA chr4 + 94230402 6857605 6857604 6857680 6857605 6857604 6857680 76 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCTA ..:.........::..:...::....x..........x.......:.:.x.:x.x...---.x.x...:.....:. 58M3I15M 55/73 75.3% 76/94230402 0.0% 3/73 4.1% 116237433 73977122 +3223 chr4 + 190214555 123141460 123141459 123141572 113 TCTCAAAAACAAAACAAAACAAACAAACAAAAAAACAGTGTTACTCTATAGTGTACTGTGTTGCCAGATTTGTT-TTGCCCACCTGTAGGCTAATGTAAGTATTCTGAGCATGT chr4 + 94230402 84790007 84790006 84790097 84790007 84790006 84790097 91 TCCAGAAAACAAAACAAAACAAACAAACAAAAAAACAGTTTAAT---------TGCTGTATTGCTGACATTATCATTTTCCA--------------TAGGTATTCCAAGTATAT ..:x:..................................x.x.:---------.:....:....:::xx..:.:-..x:...--------------..:......::..:..:. 44M9D21M1I7M14D18M 68/90 75.6% 91/94230402 0.0% 24/90 26.7% 38351453 NA +6006 chr4 + 190214555 123160300 123160299 123160474 175 GCCATCAGTTTTACTGCAGGCAAAATAAAGACACACCTCTTCCTGAAAACACAGACAACACAA-ATTACTGTGGCCAGCTTCTTATATTATAATTTTTACATCAGCTCATCCCTAACTGCTAATCACCTAATACTACAATGTAA---ACACTGCCCCTTCCAAAGACCAGGCTTCCTTT chr4 + 94230402 55015181 55015180 55015353 55015181 55015180 55015353 173 GTCATCAATTTTACTGCAGGCAAGAGGCAGCCACACCTCTTCCTG-AGACACAGACAGCACAACATTACCACAGCCA--CTCGTGCGTTATCA-TTTCACATCAGCTCGCTGCCAACTGCAGATCACCAGGACTTGCTGTGGGAAACACACTGCACTTTGC--AGGCCATGTCCCTTCT .:.....:...............:.x:x..x..............-.:.........:.....-.....::::....--:..x.:::....x.-...:..........:::x.:......x:......x::xx:.:.x:..x:.---.......x.:..x.--..:...x.:::.:.:. 45M1D17M1I13M2D14M1D50M3I14M2D16M 121/169 71.6% 173/94230402 0.0% 10/169 5.9% 68145119 NA +3214 chr4 + 190214555 123167321 123167320 123167369 49 AATTGTAGAGCTGTGTTTCTTTTTTTTGTTTGTTTGTTTGTTTTTGAGA chr4 + 94230402 29689836 29689835 29689884 29689836 29689835 29689884 49 AATCTTAGTGTTGGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAAA ...:x...x.:..x....:..........................x.:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 93477485 NA +3223 chr4 + 190214555 123181483 123181482 123181552 70 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGTGGATTGCTTGAGCCCATGGGATCAAGGCTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .....x......:.........::::........x:xx...:.x::.....:....x::.x.:x:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 47148278 NA +3360 chr4 + 190214555 123253344 123253343 123253426 83 CGTGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTCGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.:...........::........x.xx.x...x::..:........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 47220147 NA +3299 chr4 + 190214555 123299125 123299124 123299191 67 GTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGCACGCATGCATGTAGATACACATATATTTATTTC chr4 + 94230402 79265519 79265518 79265585 79265519 79265518 79265585 67 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTC .............::........xx...x.:.:..::..:.::..:.x.::..x.:......:.x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 44033606 NA +3258 chr4 + 190214555 123299129 123299128 123299190 62 GTGTGTGTGTGTGTGTGTGTGTGTCTGTGCACGCATGCATGTAGATACACATATATTTATTT chr4 + 94230402 79265519 79265518 79265580 79265519 79265518 79265580 62 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .............::........x....::.::...:..:..:x::....::.x.:x..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 44033610 NA +3860 chr4 + 190214555 123303606 123303605 123303703 98 CATAAAAAAGCCAGGCGTGGTGGCATACACCTGTAGTCTTAGCTACTTGGGAGGCTGAGGCTGGAGGATCACTTGAGCCCAGGAGGTCAAGACTGCAG chr4 + 94230402 76033182 76033181 76033277 76033182 76033181 76033277 96 CATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...::::x.x:.:::....--.:...x......:::.........::........x.:x.x.:.x.......:.....:..x.:x:.:...:.. 23M2D73M 64/96 66.7% 96/94230402 0.0% 2/96 2.1% 47270424 NA +3102 chr4 + 190214555 123311617 123311616 123311684 68 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAAAATCTATAGAAGCAAATGT chr4 + 94230402 5872038 5872037 5872105 5872038 5872037 5872105 68 CTTTTCCTCCAGAAAAAAAAAAAAAAAAAAGAGAATTAAGGTTGAAAAAAATATATAAAAATCAATGT ..:.x:...x.:..................:.:..xx..:.xx::.:.....x....:..::x..... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 117439579 72774976 +3269 chr4 + 190214555 123311631 123311630 123311682 52 AAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAAAATCTATAGAAGCAAAT chr4 + 94230402 92183970 92183969 92184021 92183970 92183969 92184021 52 AAAGGGAGAAAAGGAAAAAAAAAAAGGAGAAATAAAATCTCTAAAAGCAAAT ...:::.:....::...........:....:.x.......x..:........ 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 31127661 NA +3096 chr4 + 190214555 123314733 123314732 123314791 59 GGGTTTTTTTTGTTGTTGTTTTGTCTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCT chr4 + 94230402 39188519 39188518 39188577 39188519 39188518 39188577 59 GGGATTTTTTTGTTGTTGTTGTTTCTGGGTTGTTTTTTTCTGAAACAGAGACCTGTTCT ...x................x.x...xxx..x.......:...:......x.::::... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 84126214 NA +3310 chr4 + 190214555 123323088 123323087 123323195 108 TATATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATATACACACACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:.:::.x.x.:.:x:.::..x.....:...x:.:......x.:::..:x....:::..:..:x:.::.x:x.:.:.....:::...:x....:..::.... 108M 62/108 57.4% 108/94230402 0.0% 0/108 0.0% 102213894 88000661 +3110 chr4 + 190214555 123323090 123323089 123323166 77 TATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATACACACAT chr4 + 94230402 7596603 7596602 7596679 7596603 7596602 7596679 77 TGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACAT .:.x.....x....x.:........::.:.x..x........:.:.x...:.x.x.:x.x..x:..:...:x..... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 115726487 74488068 +3141 chr4 + 190214555 123323116 123323115 123323191 76 TATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATATACACA chr4 + 94230402 7596603 7596602 7596678 7596603 7596602 7596678 76 TGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACA .:.x.....x....x.:........::.:.x..x........:.:.x...:.x.x.:x.x..x:..:....x.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 115726513 74488042 +3218 chr4 + 190214555 123368258 123368257 123368327 70 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:...........::........x.xx.x...xx:.x.......:.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 47335061 NA +3300 chr4 + 190214555 123368656 123368655 123368728 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 47335451 NA +3548 chr4 + 190214555 123372262 123372261 123372322 61 GTGCACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......::..........::........x.xx.x...x.:........::.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 47339058 NA +3638 chr4 + 190214555 123373034 123373033 123373188 155 AGAAAAAGAAAGAAAAAGAAAAAGAAGAAGAGAAGTAA--AGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAAAGAGAAAGGAGGGAGGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044652 49044651 49044808 49044652 49044651 49044808 157 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGG---TGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:..:.xx.....:...::..x.::...xx..::..::--.......x.::x..x:....:x.--...x:......:-....:xx..........:..::.---x..:::.x.:......:...:...x....x.:::..xx:..:xx:.:.:..:.... 38M2I23M2I12M1I23M3D56M 96/152 63.2% 157/94230402 0.0% 8/152 5.3% 74328382 NA +3630 chr4 + 190214555 123373039 123373038 123373192 154 AAGAAAGAAAAAGAAAAAGAAGAAGAGAAGTAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGGAGGGAGGGAA--GAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044652 49044651 49044808 49044652 49044651 49044808 157 AAAAGATTAAAGAGAAAAGAATAAGAGA-TTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ..:.:.xx...:::.......x......-x..::.:x:.xx.......x.::x..x:....:x.--...x:......::.::.:xx...::.::...:.:..x.::..--.....:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 28M1D35M2I42M2I48M 93/153 60.8% 157/94230402 0.0% 5/153 3.3% 74328387 NA +3283 chr4 + 190214555 123384478 123384477 123384560 83 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCACCTAAACTTACCTTGCAATCTAACCATGATTAACACATGG-CATTTCTT chr4 + 94230402 24519447 24519446 24519522 24519447 24519446 24519522 76 AAGAAAAAAAGGAAAAAGAAAAAAAAAAAGACTTACCAATGCTTATGTTGCA--------AGGAATTATACATGGCCATCTCTT ..:.......::.....:.............x.:...x.x:....:x.....--------.x..x.x.:......-...:.... 52M8D15M1I8M 59/75 78.7% 76/94230402 0.0% 9/75 12.0% 98865031 91349524 +3164 chr4 + 190214555 123392507 123392506 123392564 58 TTTATGTTTTCTTTTCTTTTTCTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23976524 23976523 23976581 23976524 23976523 23976581 58 TCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT .:.............x:.:x..:x....:.................::.xx.:...:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 99415983 90798572 +3085 chr4 + 190214555 123392512 123392511 123392574 63 GTTTTCTTTTCTTTTTCTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 71751217 71751216 71751279 71751217 71751216 71751279 63 GTATTCTTTTCTTTCTGTTTTTTTTTTCCCCCTATTTGTTTGTTCTTTCTTTTAACTTCTCTG ..x...........:.x...........::::.x...x...x..:...:....xx:..:.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 51641295 NA +3032 chr4 + 190214555 123392528 123392527 123392585 58 CTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCT chr4 + 94230402 80127507 80127506 80127564 80127507 80127506 80127564 58 CTTTTTTGTTCCTTGTTCTTTTCTTCCTGTTTACTTTCTTTTTGCTGTCATGGAGTCT .......x..:...x.......:..::.x...x:...:.....x:..xx......... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 43265021 NA +12216 chr4 + 190214555 123401946 123401945 123402532 587 AGTGCAGCCAGCTCTGGGAGCAACAGCAGTGCCTCTTCTGAACAGGGACTGTTAGG------AAGGTCACCACCAACCAGACCAGTCCCTGGTCATAGGTCTGAAAGGGCAATCCGGACCCAGCCCAAGC------AACTGATTGTGGATGA------CTTGAAGGGTTCCTTGAAAGAGGAC--CTGACACAGC----ACAAGTTCATTTGTGAACAGTGTGGGAAGTGCAAGTGTGGAGAATGCACTGCTCCCAGGACCCTACCATCCTGTTTGGCCTGTAACCGGCAGTGCCTTTGCTCTGCTGAGAGCATGGTGGAATATGGAACCTGCATGTGCTTAGTCAAGGGCATCTTCTACCACTGCTCCAATGACGACGAAGGGGATTCCTATTCAGATAATCCTTGCTCCTGTTCACAATCACACTGCTGCTCTAGATACCTGTGTATGGGAGCCATGTCTTTATTTTTACCTTGCTTACTCTGTTATCCTCCTGCTAAAGGATGCCTGAAGCTGTGCAGGAGGTGTTATGACTGGATCCATCGCCCAGGGTGCAGATGTAAGA---ACTCCAACACTGTCTATTGTAAGCTGGAGAGCTGCCCCTCCCGGGG chr4 + 94230402 11125559 11125558 11126142 11125559 11125558 11126142 584 AGCACGGCCAGCTCCGTGTCCCAGAGCACCACGGCCTCCGAGCAGCGCCTGCTCAGCGCCCTGACGCCGTC-CCACTCGGGCCACTCACT--------------------CATCCGGACGCAGCCCAGGGCCGGCGAGCTGAAAGCGGAGGAATCTCCCTTGAAAGGGGCAGTGGAGAAGGGCAGCCTGCACGGCGGGCACCTCTTCGTCTGCGAGGAGTGCGGGCGCTGCAAGTGTGCCCGCTGCACGGCCGCCCGTGGCCTGCCCTCCTGCTGGCTGTGCAATCAGCGCTGCCTGTGCTCCCCAGAGAGCCTCCTCGACTACGGGACTTGTCTCTGCTGCGTCAAGGGCCTCTTCTACCACTGCTCCAGCGATGACGA---GGACACCTGCGCTGATGACCCATGCTCCTGCGGGCCGGGCTCCTGCTGCGCCCGCTGGGCTGCCATGAGCTTCCTCTCCCTCCTCATGCCCTGCCTCTGCTGCTACTTTCCCACCTTGGGGTGCCTCAAACTTTGCCAGCGGGGTTATGACGGCCTGAAACGCCCCGGCTGCCGCTGTCAGACCCACACCAACACGGTGTGCAGAA------AGATCTCCTCCTCCAGCGG ..::.:........:.x.xx.x.x....x::.xx.:..:..:...x.x...:.x:.------:.x.:.::.-...x:.:.:...x..x..--------------------x........x.......:.x------.:....xx.:...x..------......:..xx.xx..:.::...:.--.:x:...:..----..xxx...:.:..:..:x....:...x:x..........xxx:x.....x..:x..x.x:x...:..x.....:.x.x:x..:..:.:..:x.....x.....:x.x......x.xx.x..x..:..:..:..:x.x....xx.........x..................::..:.....---...:x...::x.x...:.:..x........:xx:.x:xxx:x.......x.:x.x.:xx:xxx:...:.xx:.x.x..::.x:.:x.:..:...:.x:x...:..:::...::.:xx:..:.....x..:..x...x:.x..x........x.xx.xx.x.....x..x...x.x...x...---..x.......x..x.::x.x.------...x..x.:.....x.x.. 56M6I9M1D18M20D20M6I16M6I25M2I10M4I181M3D182M3I21M6D19M 354/557 63.6% 584/94230402 0.0% 57/557 10.2% 112276387 77938168 +3302 chr4 + 190214555 123414839 123414838 123414920 82 GTGGTGGCTCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGTGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.:...........::........x.xx.x...x.:........::x:..x.xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 47381638 NA +3532 chr4 + 190214555 123420061 123420060 123420139 79 GTGGCGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATCCCTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:..::.--......:...........::........x.xx.x...x.x.........x.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 47386860 NA +3432 chr4 + 190214555 123447337 123447336 123447420 84 GCAGTGCCCCTCCCCTCCCTTTCCCTCCTCTTCCCTCTCCTCTCCCCTCCCCTCCCCTCCCTTCCCCTACCTTTTTTTTTTTTT chr4 + 94230402 55189088 55189087 55189171 55189088 55189087 55189171 84 GCCATGCCACAACCCTCCCCTTCCCTTCTGTTCCCTTCTCTCTTCCACCACCACCTATTATTTGCCTTACTTTTCTCCTTCTCT ..x:....x.xx.......:......:..x......:::....:..x:.x..x..:x.:x:..x..:...:...:.::..:.:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 68258249 NA +3128 chr4 + 190214555 123447377 123447376 123447445 69 TCTCCCCTCCCCTCCCCTCCCTTCCCCTACCTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTTCCCT chr4 + 94230402 56907959 56907958 56908027 56907959 56907958 56908027 69 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTT ..:x....::.....:.:x:....:.::x.::..............:....x:.xx....::....::. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 66539418 NA +3183 chr4 + 190214555 123458155 123458154 123458237 83 CACGGTGGCAGGCGCCGGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTCAACTCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:--..:.xx...:.::..........::........x.xx.x...x.:...x...:...:..x.xx:..:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 47424958 NA +3468 chr4 + 190214555 123471779 123471778 123471851 73 GCACACATGTAGTTCCAACTACTCAGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAG-TTTGAACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...:..........:.....::::........x.xx.x.:.x::.....:.....:..-....::...:.. 61M1I12M 52/73 71.2% 74/94230402 0.0% 1/73 1.4% 47438575 NA +3295 chr4 + 190214555 123472722 123472721 123472778 57 GTTTTGTGTGATTTTTTGTTGTTGTTGTTG-TTGGTTGTTTTTTTTGAGACACTGTTT chr4 + 94230402 81178904 81178903 81178961 81178904 81178903 81178961 58 GTTTTGCGTTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAGGATATAGTTT ......:..x:...................-...x..........x::..:.:x.... 30M1I27M 47/57 82.5% 58/94230402 0.0% 1/57 1.8% 42293818 NA +3431 chr4 + 190214555 123482525 123482524 123482591 67 TGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......::..........::........x.xx.x...x::........:.....x.xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 47449314 NA +3565 chr4 + 190214555 123487200 123487199 123487292 93 CATGGTAGTACACACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCTGGGAGGCTGAGGCTGCAGTGAGCCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG--GCTGTAGAACATGAT ..::..:..:...:--..................::........x.xx.x.:.x.......:.:x:..:...xx..--..x..:::x...... 14M2D60M2D15M 64/89 71.9% 89/94230402 0.0% 4/89 4.5% 47454003 NA +3045 chr4 + 190214555 123492511 123492510 123492580 70 GAAATAATGCCTTCTGCCTTCTACATTCACACACACACACACACAGACACACACACACACACACACACAC chr4 + 94230402 35573469 35573468 35573538 35573469 35573468 35573538 70 GAAACAATCCTTCTCAAGTCTTGCATTCAGACAGACACGCACACAGACACACGCGCGCACGCCCCTTCAC ....:...x.:.::::xx.::.:......x...x....:.............:.:.:...:.x.x:x... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 87919042 NA +3122 chr4 + 190214555 123498469 123498468 123498523 55 ATCCAAAAGATATATAGATAGATATATCCAAAAGATATATAGATAGATAGATATA chr4 + 94230402 74570385 74570384 74570439 74570385 74570384 74570439 55 ATATGAAAGATATATAAATAGATATATGTGAAAGATATATATATACATAAAAACA ..x::...........:..........x::...........x...x...:.x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 48928084 NA +3284 chr4 + 190214555 123501421 123501420 123501511 91 CATGGTGGCATGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAAGCAGAGGTTGCAG----------CAAGCAGA chr4 + 94230402 76033197 76033196 76033295 76033197 76033196 76033295 99 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGA ..::....--..::.x......:...........::........x.xx.x...x::.......:.:.:.:x:xx:..:..:..----------........ 8M2D73M10I8M 63/89 70.8% 99/94230402 0.0% 12/89 13.5% 47468224 NA +3224 chr4 + 190214555 123527975 123527974 123528047 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAGTGGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x..:xx:.........:.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 47494770 NA +3012 chr4 + 190214555 123528077 123528076 123528148 72 CCTGGGTGACAGAGCAAGACTCCGTCTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGGAT chr4 + 94230402 32176682 32176681 32176753 32176682 32176681 32176753 72 CCTATGTGACAGAACAGAACATGGCTTTGATAAGAAAATGCAGGGAAAAAAAAAAAAAAAAAAGGACAGAAT ...:x........:..::..x:x.::.::x...:....x:x.:::...................:.xx.:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 91351395 NA +3256 chr4 + 190214555 123542587 123542586 123542671 85 TGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCTTTTGAACCTTGGAGGCTGAGGCTGCAGTGACATG chr4 + 94230402 76033202 76033201 76033283 76033202 76033201 76033283 82 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATG ........:--......:.........:.::........x:xx.x.:.x.x:.......:x.:..x:.x:.....:..-:..... 9M2D67M1D6M 59/82 72.0% 82/94230402 0.0% 3/82 3.7% 47509385 NA +3170 chr4 + 190214555 123544268 123544267 123544344 77 TTTGATGGTGTTTCTTTTATTTATTTAGTCGATGGCTTTTAATTTCTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 14223144 14223143 14223220 14223144 14223143 14223220 77 TTCACTGTCATTTCTTGAAAATATTAAGAATACTGACTTTAATTAATTCTTTCTTTTCTCTTTTTTTTTTTTTTTCT ..::x..x::......xx.xx....x..xxx.:x.x:.......xx.............:...............:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 109321124 80893431 +3086 chr4 + 190214555 123544300 123544299 123544361 62 TGGCTTTTAATTTCTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGTTT chr4 + 94230402 37944946 37944945 37945007 37944946 37944945 37945007 62 TGTTTTTTAAGGTTATCTTTCTCATCCTTTTTTTTTTCTTTTCTTTTTTTCCTCAAGTGTTT ..x:......xx.:x.......:x..:..........:....:.......::.x.:::.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 85599354 NA +3592 chr4 + 190214555 123561179 123561178 123561278 100 ACAAAAAATTAATGGAGGGTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATCACTTGAGCCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATACACAGTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...::x.:..:x.x:......-......----....:...........::.:......x.xx.x...x.......:..:..:..x.xx:..:..:.. 24M1D6M4D65M 67/95 70.5% 95/94230402 0.0% 5/95 5.3% 47527996 NA +3035 chr4 + 190214555 123590399 123590398 123590451 53 TTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTGTTTTTTGAGACGGAGTC chr4 + 94230402 13302251 13302250 13302303 13302251 13302250 13302303 53 TTCTGTTTGTTTTTTTTTTTTGTTAGTTTGTTTTTGCCTCTTGGGAGGGATTC ..:.x...................xx...x......::.:...:..x...x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 110288148 79926407 +3906 chr4 + 190214555 123596092 123596091 123596165 74 GTGCGCCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x.....::...........::........x.xx.x...x........:....:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 47562888 NA +3128 chr4 + 190214555 123640730 123640729 123640860 131 TGCAAAAAGTAAAAAAGACTGAAAGGGGTGAGGAAGAAAAGAAGGAAGGAAGGAAAGAAAGGGGGAGGGAGGGAAGGAAGGGAGGCAGGGAGGGAGGGAGGGAACGAAGGAAGGAAGGAGGGAGGGAAGGA chr4 + 94230402 12768600 12768599 12768730 12768600 12768599 12768730 131 TGTAAATACAAGACTAGACAAGAAGGGGGCAAGAAGAGAAGGGGGAGGGAAGGCACAGCAAGAAGTGGAATGGATGACATTTAATGAAGGAAACATGGTGAGAAGTCAGGAGAAAAAAAGAAAAGGAAGAA ..:...x.xx.:.xx....x::......xx.:.....:...::...:......x.x::x.:.::.x..:.x...x.:x.xxx.:xx.:...::x.x..x.:...xxx....:::..::..::.:.....:. 131M 75/131 57.3% 131/94230402 0.0% 0/131 0.0% 110872130 79342425 +3015 chr4 + 190214555 123640736 123640735 123640856 121 AAGTAAAAAAGACTGAAAGGGGTGAGGAAGAAAAGAAGGAAGGAAGGAAAGAAAGGGGGAGGGAGGGAAGGAAGGGAGGCAGGGAGGGAGGGAGGGAACGAAGGAAGGAAGGAGGGAGGGA chr4 + 94230402 61867136 61867135 61867256 61867136 61867135 61867256 121 AGGCGAGAAGAAATCAGAAGTGGAAGGAAGATAAGAAGGCAGGAAGAAGATGGGAGGTCTGGGCAGGAAGGCCCAGAGACACTGAGACAAAAGGGCAGCAGGAAAAGATATGAAGGAATGA .:.::.:..::.x.x.:.:.x.x:.......x.......x......:.:.x::::..xxx...x:......xxx:...:..xx...:x.::::..x.:.:::::...:x.x..:...:x.. 121M 68/121 56.2% 121/94230402 0.0% 0/121 0.0% 61773600 NA +3313 chr4 + 190214555 123645530 123645529 123645603 74 CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA-TATAG chr4 + 94230402 4618339 4618338 4618413 4618339 4618338 4618413 75 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAG ..x.:.:...:...:x:x.:..x.:.....::..............x:..x.::......x.x......-..... 69M1I5M 54/74 73.0% 75/94230402 0.0% 1/74 1.4% 119027191 71187364 +3353 chr4 + 190214555 123645532 123645531 123645600 69 CTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618339 4618338 4618407 4618339 4618338 4618407 69 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ..x.:.:...:...:x:x:::.x.......::..............x:....::......x.x...... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 119027193 71187362 +3651 chr4 + 190214555 123645534 123645533 123645607 74 CTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAGCTTA chr4 + 94230402 4618339 4618338 4618412 4618339 4618338 4618412 74 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATA ..x.:.:...:...:x.x.:..x.......::..............x:x...::......x.x.......:x.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 119027195 71187360 +3182 chr4 + 190214555 123645536 123645535 123645602 67 CTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA chr4 + 94230402 4618339 4618338 4618405 4618339 4618338 4618405 67 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATA ..x.:.:...:....x:x:::.x.......::..............::x...::......x.x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 119027197 71187358 +3066 chr4 + 190214555 123652932 123652931 123652992 61 TCAAAATTAAGTGCAATTAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 55078054 55078053 55078114 55078054 55078053 55078114 61 TCAAAATCCAGTGCGATGAAATACAATGTTTTTTTTTTCTTTTTTTTTTCTGAATCTTCTT .......:x.....:..x....:.xx.x..........:..........:.xxx.:..:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 68574878 NA +3411 chr4 + 190214555 123705808 123705807 123705889 82 GAATATAAAAGAATACTAATACGGTTTCATCAGAATGTCCTTTACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 + 94230402 29646457 29646456 29646534 29646457 29646456 29646534 78 GAACACACAAAAA----AGCATAGTTTCACTAGAAAGCCCTCTACTTTTTTTTTTTTTTTTTAATCTTCTAAAACATAATTT ...:.:.x..:..----.::.::......::....x.:...:....................xx.:..:.:.:..:x.:.:. 13M4D65M 55/78 70.5% 78/94230402 0.0% 4/78 5.1% 94059351 NA +3047 chr4 + 190214555 123705819 123705818 123705873 55 AATACTAATACGGTTTCATCAGAATGTCCTTTACTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 62597076 62597075 62597130 62597076 62597075 62597130 55 AATATTGATGCCATTTACTCAGAATTTCCTCTGCTTTTTTTTGTTTTTTTTTCCT ....:.:..:.x:...xx.......x....:.:.........x.........::. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 61108743 NA +3177 chr4 + 190214555 123719763 123719762 123719861 99 GAAAAAAAAACACCAAACCAAAACAAACAAACAAACAAAAAAACTTAGGAATATACATAACCAAGGAATCAAAAGACTTCTACAAGGAAAACTACAAAA chr4 + 94230402 32960220 32960219 32960318 32960220 32960219 32960318 99 GGAAAAAAAACACAAAACCAAACCAAACCAAAAGAAAAAAGACCCGGAACATTTTAATGATCAATAAATTAAGATGTCAATACATTGAAAGTAATAAAA .:...........x........x.....x..x.:.x....:.x.:x:::x..x.xx..:.:...x:...:..:.x:::xx....xx....::x.:.... 99M 63/99 63.6% 99/94230402 0.0% 0/99 0.0% 90759543 NA +3694 chr4 + 190214555 123761571 123761570 123761632 62 TCAAAAAAGAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATGTA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::..:x.:.........x.:...............:.:..:...:.....x.....:. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 122266577 67947978 +3131 chr4 + 190214555 123761575 123761574 123761627 53 AAAAGAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x::.........x.:......x........:.:..:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 122266575 67947980 +3069 chr4 + 190214555 123761580 123761579 123761634 55 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATGTATA chr4 + 94230402 1495001 1495000 1495055 1495001 1495000 1495055 55 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..x.:.........x.:....x..........:.:..:...:.....x..:.::. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 122266579 67947976 +3197 chr4 + 190214555 123761582 123761581 123761641 60 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATGTATATATAACA chr4 + 94230402 85548420 85548419 85548479 85548420 85548419 85548479 60 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACA .............:.:xx....:...:.:.:.::...:..........x.....xx:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 38213162 NA +3423 chr4 + 190214555 123762641 123762640 123762722 82 ATCAGGATTGGCAGATATTAAAAATATCAACAACAATTGTTTATAGTTGTAAACAATTAGAGAATATGTTTTTAAAAATTAA chr4 + 94230402 33121926 33121925 33122007 33121926 33121925 33122007 82 ATAAAAACTTGCATGCTTTAAAAACATTAAAAACAATGGAATATAGGTATGATGGAACAGAAAATATGTTTTTAAAAGTTAA ..x.::.:.x...x::x.......:..:..x......x.xx.....x.:.:.xx:.x:...:...............:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 90640715 NA +3034 chr4 + 190214555 123769993 123769992 123770056 64 CAGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGACTCTTGCTCTGTCACCCAGG chr4 + 94230402 72881895 72881894 72881958 72881895 72881894 72881958 64 CAGCTTGTTTTTTTTTTTTTGTGCTTTTTTTTTTCTTAAGCCTATTTTTTTTCTGCAGTACAGG ...x................x.x:..........:...::.xx.:.:..x:....:x::x.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 50888098 NA +12267 chr4 + 190214555 123782455 123782454 123782741 287 ATAACATGGTGTATGATAAGATATTTGCTTTTGGGTGGGGAAGATTTGCTT-AAAGCGGAGAAGGTTTCAGGATGACAAAACAAATTTTCCCG-CAAGTTTGGTATCAAGCTTTTGTTTTGTTATACTTGATTATCTACTTTGGCTGAATAATCCAAACATACATTCCAATCCAATTTAGTCCCTGCTTAGAGTGGCTCTTCTTATTTGTCCAAGAGTTTCAGAACTA---TTTTTTTTCTACTTCTTCTGAGCATTCAGCCTTTAT-----------GTATTTCAAGGACAACAGACTCCAG chr4 + 94230402 54775059 54775058 54775359 54775059 54775058 54775359 301 ATGAAGTGGGACATGA-AACACATTGTTTTCTGTTCTGGGAAGGTCTGCTTGAAAACGGAGCAGATTTCAAAATGATAAAACAATTTTTCCTGGCAAGTTTGGTATCAAGCTTT-GTTTTGCTAAACCTGATTATGTACTTTGGCTGCACAGCACAAGCATATATTCCAAACCAATTTAGTCCCTGCTCAGAATGAGTCTCCTTATTTGTCCAACAGCCTTGGAAAAAAACATTTTTTCATGCTGACTTTGAGTGACTGTTCTGCACACACTGCAAAGGTATTCCAGGGACAACAGACCTAAG ..:.x:...x::....-..x.:...xx:..:..xx:x......:.:.....-...:.....x..:.....::....:.......x......:.-....................-......:..x..:.......x...........x.:.::x...:....:.......x.................:...:..:x...:.............x..::.::...xx.---x......:x.:..xx:.:....::x:::x:..x:.:-----------.....:..:...........::x.. 16M1D34M1I41M1I20M1D113M3I36M11I25M 211/285 74.0% 301/94230402 0.0% 18/285 6.3% 69007396 NA +3051 chr4 + 190214555 123784254 123784253 123784303 50 ATTCCTGATCTTTTAAAACTTGTGTTCTTGTGTGTGTGTGTGTGTGTGTA chr4 + 94230402 21644413 21644412 21644462 21644413 21644412 21644462 50 ATGTCTGATCATTCCAAACTTTTTTTTTTCTGTGTGTGTGTGTGTGTGTA ..x:......x..:x......x.x..:..x.................... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 102139841 88074714 +3153 chr4 + 190214555 123802401 123802400 123802544 144 ATTGGGAGCAAA-GATTTTTGAGCCAAAAAGAACTGGATTTGTATCCTAACTCACCATCTGCTGTTTCTATGACCTTGGGCGAGTTACTTACCCATCTGAGTCCCAGTTTCCTCACTTGTAAATTGGAGATAACAATAATGTTTA chr4 + 94230402 52375202 52375201 52375346 52375202 52375201 52375346 145 ATGGGAAGCAAAAGGCTTCAGCAGCTAGAGCAACTAGGCTTCTGTCCTGTTCTGCCAGATGACTTCTGTACAGCTTTGGTCAGCCCCTTCCTCCCTTTGAGTGTCCCCTTCTCTGCCTGTAAAATGGGGATAACAATGCTGATTA ..x..:......-.::..:x.x:x.x.:.:x....:.::..x.:....:x::::...xx..x:x.:.x..:::.:....x.::x::x:.:x:..x.:.....x:.xx:...::::.:......x...:.........:x..x... 12M1I132M 81/144 56.2% 145/94230402 0.0% 1/144 0.7% 71427199 NA +3589 chr4 + 190214555 123819087 123819086 123819163 77 GTGGCACACCTGTAGTCCCAGCTACTCAGGGGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::...x......:.........:::::.......x.xx.x...x.:.........:.:..x:xx:..:..:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 47785886 NA +3107 chr4 + 190214555 123838000 123837999 123838063 64 GAGATTGGCATTGTACATATACATGTATATATATACAC--ACACACACATATTCTTTGCAATAAAA chr4 + 94230402 4409071 4409070 4409136 4409071 4409070 4409136 66 GAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAA .......:x::..........:..:......:.:....--.x.......:...:.::x..::.:.. 38M2I26M 47/64 73.4% 66/94230402 0.0% 2/64 3.1% 119428929 70785626 +3068 chr4 + 190214555 123843618 123843617 123843688 71 AAGAAAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAGGAGAAAAAA chr4 + 94230402 38078781 38078780 38078851 38078781 38078780 38078851 71 AAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAA ......:.::...........:..:.:.......x.x...::.:xx.xx.x:...:..:x:.:.:...... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 85764837 NA +3239 chr4 + 190214555 123843639 123843638 123843695 57 GAAAGAGAAAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAGGAGAAAAAATCAGAAT chr4 + 94230402 10675423 10675422 10675479 10675423 10675422 10675479 57 GAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGAGTAT ...::...:......:..::........:..::.x.:..:......:....x..x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 113168216 77046339 +4135 chr4 + 190214555 123855414 123855413 123855539 126 TGTTAGAGGTTAACATTTGTGTTATTTCCTCTTATTGCCTGGCTTTACAGAATGTTATGCCCCACTGCTTTTATTAAATCCAGGTAATAGAGGAAATAACAGTGTTATTAACCTCTAACACTGATG chr4 + 94230402 54736843 54736842 54736965 54736843 54736842 54736965 123 TGTTAGAGGTTAATAACACT--TATTTCATCC-ATTGCTGGGATCTAATAAAAGCAGTAGGGCATAACATTCTGTAAAACCAGGCAATAGAGGAAATAACACTGATGTTAACCTCTAACATAAATG .............:.x:xx.--......x..:-.....:x..x.:..xx:..x.:x:.:xxx..:x:.x..:xx....x.....:................x..x.:.............:x:... 20M2D10M1D93M 86/123 69.9% 123/94230402 0.0% 3/123 2.4% 69118571 NA +3184 chr4 + 190214555 123857440 123857439 123857488 49 GAGGAAAAGGCCCTTTCCTTTTTTTTTTTTTCTTTTTTTTAAACTTTGT chr4 + 94230402 26035922 26035921 26035970 26035922 26035921 26035970 49 GAGGTGATGGTCTTTTCCTTTCTTTCTTTTTTTTTTTTTTAAACTTGGT ....x:.x..:.:........:...:.....:..............x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 97821518 92393037 +3469 chr4 + 190214555 123860500 123860499 123860577 78 TGGCGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...:.--.:..:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 9M2D67M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 47827298 NA +3536 chr4 + 190214555 123868809 123868808 123868890 82 GTGGTGCCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----:.x....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 7M5D70M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 47835608 NA +3587 chr4 + 190214555 123875512 123875511 123875585 74 GTGCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGTATAAGAATCCCTTGAACCTGGGAGTTGCAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:x.:........x:x.:x...x.x........::.:..:.x::..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 47842308 NA +3150 chr4 + 190214555 123879417 123879416 123879462 46 ACACAGAGACACACACACACACGTGTGTGTATATATATATATATAT chr4 + 94230402 44243263 44243262 44243308 44243263 44243262 44243308 46 aCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT .......x............::........:.:.x.:.:....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 79636154 NA +3332 chr4 + 190214555 123879417 123879416 123879464 48 ACACAGAGACACACACACACACGTGTGTGTATATATATATATATATAT chr4 + 94230402 44243261 44243260 44243308 44243261 44243260 44243308 48 ataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATAT .:...x........................:.:.:.x.:.:....... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 79636156 NA +3259 chr4 + 190214555 123900344 123900343 123900426 83 CATAATGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTTAACCCGGGAGGTGGAGATTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:.....--...x....:.:...........::........x.xx.x.:.x::...x.....:.:..x.xx:.::..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 47867147 NA +3212 chr4 + 190214555 123908871 123908870 123908954 84 TACATAAAATGATTAAAAAGTAAATTTTATGTTATATATATTTTACCACAATAAAAAGGTTTTTT-----------AAAAAGAAGAAAATATAAT chr4 + 94230402 90693247 90693246 90693341 90693247 90693246 90693341 95 TACATGAGAAACTTAAGAAGAAAAATTTACCCTAAATGTCTTCTAACACAATGAAAAGCTCTTTTAAGCAGATATCAAAATGAAGAAATAATAAT .....:.:.x:x....:...x...x....:x:..x..:.x..:..x......:.....x.:....-----------....x.......xx..... 65M11I19M 62/84 73.8% 95/94230402 0.0% 11/84 13.1% 33215624 NA +3234 chr4 + 190214555 123921901 123921900 123921989 89 ATATATATATATGTGTGTATATATATATGTGTATATATATATGTATATATATGTGTATATATGTGTATATATGTGTATGTATATGTGTA chr4 + 94230402 89812969 89812968 89813057 89812969 89812968 89813057 89 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA .....x...x..:.........x..x...:x.xx...:..:..:.x.:x:x::..::...:.x:x.:.:.:.....:.:.......x.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 34108932 NA +3687 chr4 + 190214555 123921906 123921905 123922029 124 TATATATGTGTGTATATATATATGTGTATATATATATGTATATATAT--GTGTATATATGTGTATATATG------TGTATGTATATGTGTATGTATATGTGTATATATGTGTATATA---TATGTGTATATGCA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:........x.x.:.:x::..:.x.....:..:x:.:.....:--.....:x...::....:..:x------.x.:..............x.....::.::.:.:.x.xx..:.---.x....x:.:.:.. 47M2I21M6I42M3I14M 83/124 66.9% 135/94230402 0.0% 11/124 8.9% 102812712 87401843 +3247 chr4 + 190214555 123921908 123921907 123922014 107 TATATGTGTGTATATATA-TATGTGTATATATATATGTATATATATGTGT----ATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATAT chr4 + 94230402 89812949 89812948 89813060 89812949 89812948 89813060 112 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .......xx..:.x.:.:-:..:.:x...x....:.......x..x:..:----...:.....:.x.:x:x::.::....:.x:x.:...:.:.............x..x.. 18M1I31M4I58M 71/107 66.4% 112/94230402 0.0% 5/107 4.7% 34108959 NA +3203 chr4 + 190214555 123921920 123921919 123921983 64 TATATATATGTGTATATATATATGTATATATATGTGTATATATGTGTATATATGTGTATGTATA chr4 + 94230402 40388217 40388216 40388280 40388217 40388216 40388280 64 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA .:.:.:.......x...x..:......::.......:...:.x:...:..xx......xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 83533703 NA +3631 chr4 + 190214555 123921939 123921938 123922052 114 ATATGTATATATATGTGTATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACAC--ATATACATACACAC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x..:x....:......:.x.x....x:::...x.:......:x::::...::x::...::x....:..:.:..:x:...:x.x.:..:....:.::.:--....:...:..... 100M2I14M 70/114 61.4% 116/94230402 0.0% 2/114 1.8% 102812752 87401803 +3221 chr4 + 190214555 123921952 123921951 123922015 64 TGTGTATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATA chr4 + 94230402 40388217 40388216 40388280 40388217 40388216 40388280 64 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA .....:...:...x...x..::......:.......:..::.x.......xx.:...:xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 83533735 NA +3235 chr4 + 190214555 123921953 123921952 123922107 155 GTGTATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTA----TATATGTGTATATATATGTGTATATGCATATATACACATATACATACA--CACACATACATAAGTATATATATAAAATTGCTGGATCAAGTAATTTTTTGAGGAATCT chr4 + 94230402 91738172 91738171 91738326 91738172 91738171 91738326 155 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACT------TCAAATACTCATTTATGGTCTCT .::....x..:...x.x:x.:..xxx.:....:x:.....x.x:x...:----.....x.:.::....:.:.xx...x:x.x:.x....x.x.........--x...:......:.........x.x.x.:.------....:..x.:x...:x..xx... 49M4I48M2I29M6D23M 97/149 65.1% 155/94230402 0.0% 12/149 8.1% 32183781 NA +3356 chr4 + 190214555 123921954 123921953 123922107 154 TGTATATATGTGTATATATGT--GTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACACATATACATACA--CACACATACATAAGTATATATATAAAATTGCTGGATCAAGTAATTTTTTGAGGAATCT chr4 + 94230402 91734577 91734576 91734728 91734577 91734576 91734728 152 TATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACT------TCAAATACTCATTTATGGTCTCT .:..x......x.x:x....x--.:..:..x..:...x.x:x....x:xx.....x.:.::....:.:.xx...x:x.x:.x....x.x.........--x...:......:.........x.x.x.:.------....:..x.:x...:x..xx... 21M2I75M2I29M6D23M 98/148 66.2% 152/94230402 0.0% 10/148 6.8% 32187377 NA +3079 chr4 + 190214555 123921974 123921973 123922037 64 TGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACA chr4 + 94230402 40388217 40388216 40388280 40388217 40388216 40388280 64 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATA ...:.....:...x...x..:....:.::.......:...:.x.......xx..::..xx..:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 83533757 NA +3340 chr4 + 190214555 123921983 123921982 123922059 77 ATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACACATATACATACACACACATACA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGT--GCACATACACACACCTATATGAAGACACATACA .......::.......xx:x:......x..:.:.....x.:.--...:...:.....:x..:..:x.x......... 42M2D33M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 34173333 NA +3004 chr4 + 190214555 123922251 123922250 123922327 77 TCATTATGGTTTTAATTTGTATTTCTCTGATAAGTAGTAAAGATTTACTGAATTCATTTTTTAATTCTAGCAGTTTT chr4 + 94230402 49579396 49579395 49579472 49579396 49579395 49579472 77 TCATTCTGCTTTTAATCCTTGTCTCATTATGGAATAGTAAATGTTTACTGTGTTTCTGTGTTAATCCTTGCAGCTTT .....x..x.......::x.:.:..x:.:xx:.:.......x:.......x:..:x.x.x.....:..x....:... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 74342855 NA +14231 chr4 + 190214555 123936579 123936578 123936941 363 AAGAAAAGGTTGAATCTCATAACTGTATTAATATCTTGTGAATGTGCCTTATCATATTTGTCTGGGTTTTTGCTATTCATTTCCTTGTGATAAAATTCCTGGGCAGAGCAAGTCTTCGGAAGTAAGCCCACAGGGCTGCCTGGCAAGTTTATTTTGGGAAGGAAATAATCAATTTAGAGCTATTACTGCAGGAGCCCTTATCAAGCTCATTTCCTCATCTAATGCTTCAGAAGCT-AATATTACATGTTTAGCAGCAACTTCAAAGAA---ACAGTACTGTGCTTTGTAGGTTTTATTAATGAGAAATTACTCTGAGGGCACCACGTGTTTACCATTAACATGAC---TACAATCCACAGACTTGCAAAC chr4 + 94230402 54695714 54695713 54696067 54695714 54695713 54696067 354 AAGGGGAGAGCAAGGATCATAACTGTAGTA------------TGTGCCTTATCAAAATTGTCAGGGCTTTTACATTCCATTTCCTTGTGATAAGCCCCTTGTGCTGAGCTGGTATTTGTAAGTGAGCCCAAAGGGCTGACTGATAAGTTTACATAAGGAAGGAAATAATCAATTTAAGGCTGTTACTGAATGAGCTCTTATCATGTTCATTTCCTCA-CTATTGCTTCTCAAGCTAAATATTACATGTTTAGGAGCAACTTCAAAAGACTTACCATTCTAGCCTCTGCA--TTTTATT-ACGGAAAACTCTTTCAATAGCATAAAGCATTTGCCTGCACCACAAAGGGTACAATTCACACACTGAAAAAC ...:::..:x::.:xx...........x..------------............x.x.....x...:....:.xx.:................:x::.:..x..x....x:..x..:.x....:......x.......x...::.......:x.x:....................::...:......x.x....:.......x.:...........-...x......xx.....-................x............::.---..x:.x..:xx..:..:.--.......-.:.::...:.x:.:::.x:...:x.x.::...:..xx:.x..::.x---......:....x...x:x.... 30M12D175M1D17M1I32M3I18M2D7M1D46M3I22M 256/347 73.8% 354/94230402 0.0% 23/347 6.6% 69240865 NA +3626 chr4 + 190214555 124018164 124018163 124018280 117 AGTTCCCTTCCCTTCCTTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCTTCCCTTCCCTTCCCTTCCCTCCCCTCCCC chr4 + 94230402 929190 929189 929306 929190 929189 929306 117 AGCTCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCCCCACTGCTGCCC ..:...:....x.::..:..:.:.....x.:.:.:.x.x.x.x...x:..x...x.:.x:.x::....xx.:.x.:.::..:.....:x:.:x::......:.:...x.:x..x... 117M 70/117 59.8% 117/94230402 0.0% 0/117 0.0% 123088974 67125581 +3170 chr4 + 190214555 124018351 124018350 124018412 62 TTCCCTTCCCTCCCTTCCCCTCCCCTCCCCTCCACTCCCCTCCCCTCTCCTCTCTTCCCCTC chr4 + 94230402 86523032 86523031 86523093 86523032 86523031 86523093 62 TTCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCCACTC .......::......::..x.........::..x:.:.:.::...:xx..:.:.....x... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 37495319 NA +3928 chr4 + 190214555 124018551 124018550 124018777 227 TTTTTCTGTTTTCTTCCTGTGCATTTTTT--CCTTCTTCCTCCCTCCCTCCTTTCCTTTCTTCCTCCTTCCCTTCCTCTTTCCCTTTCTTCCTTTATTCTTTCCCTATTTCTTCTTTTCCTTTCT-----TTCTGTT------TTTTTCTTAAAGAAAAAGGTCCCAAGCCAAGCCGGATCTGCCATGATGCAGGTTCTGGCATTGGCATCCCCACTGCCCTCATTGTATTGCTTAGGGA chr4 + 94230402 53764504 53764503 53764732 53764504 53764503 53764732 229 TCTTTTTGTATTGTTTTAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTC--ATTCTTGTCATCCCTTCTCCAGACTCTAATGGTAACTTTTTACCCAGTTTGGCATTTCCAGGCCAAGCC---TCC------AGACAGCTCCTGGCATTGTCATAGAAAGGACTCCTTCAGTATTTCATAGGGA .:...:...x..x..::x..x:.x...:x--.:..x:.::.:..:.:..........:.:.:.....:...x:x..:x......:..x:.:..:..:::....:.--x.....x.:x...:....-----:...:x.------.....x::x.:xxx::x:x.:...:........---..:------.x:...x.:.........x...xxxx.xx:.:.::x:x.....x.x...... 29M2I74M2D18M5I7M6I33M3D3M6D52M 134/216 62.0% 229/94230402 0.0% 24/216 11.1% 70254047 NA +3111 chr4 + 190214555 124018585 124018584 124018677 93 TTCCTCCCTCCCTCCTTTCCTTTCTTCCTCCTTCCCTTCCTCTTTCCCTTTCTTCCTTTATTCTTTCCCTATTTCTTCTTTTCCTTTCTTTCT chr4 + 94230402 50176267 50176266 50176359 50176267 50176266 50176359 93 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCT ..:..x:...x..x..:............::x...x::.x::...x.x..x:.:::.:.:......x:x.x:x.:..:x.:.:.......... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 73842318 NA +3270 chr4 + 190214555 124118607 124118606 124118689 83 CGTGGTTGTGCATGCCTGTAATCCCAGCTACTTGGATGGCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..x.....:.--....:.:...........:.x.......x:xx.x...x.:........::.:..x.xx:..:...:. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 48085410 NA +3763 chr4 + 190214555 124138207 124138206 124138290 84 GTCTCTCTCTCTCTCTATATATATATATATATACACACACACACACACATATATACATATAT-ATATATACACACATACATATGT chr4 + 94230402 60831539 60831538 60831623 60831539 60831538 60831623 85 GTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ..............x.:.......:.:....:......:.....x:x:.x...:.:x.....-:.x.:.:.:..::.:::...:. 62M1I22M 59/84 70.2% 85/94230402 0.0% 1/84 1.2% 63306668 NA +3125 chr4 + 190214555 124138208 124138207 124138288 81 TCTCTCTCTCTCTCTATATATATATATATATACACACACACACACACATATATACATAT-ATATATATACACACATACATAT chr4 + 94230402 60831542 60831541 60831623 60831542 60831541 60831623 82 TCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...........x.x.......:.:....:.:....:.....x:x:.x...:..x:....-:.x.:.:::..::::.::.... 59M1I22M 54/81 66.7% 82/94230402 0.0% 1/81 1.2% 63306666 NA +4025 chr4 + 190214555 124138208 124138207 124138328 121 TCTCTCTCTCTCTCTATATATATATATATATACACACACACACACACATATATACATATATATATATACACACATACATATGTATATGTATGTCAAATACCACATGCTCTCACTTACAAGC chr4 + 94230402 60831536 60831535 60831648 60831536 60831535 60831648 113 TCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC---TGTGCGCATGTGTGTATATTTC-----TCATAAGATCTGAACTATGAGC ...x...........x.:.:.......:.:..:........:.....x.x..x.:.:..x.....:xx.---::.:.::....:.:.:...x..-----:..:.x.x...x.x:..::... 69M3D22M5D22M 78/113 69.0% 113/94230402 0.0% 8/113 7.1% 63306672 NA +4263 chr4 + 190214555 124138210 124138209 124138292 83 TCTCTCTCTCTCTATATATATATATATATACACACACACACACACATATATACATATATAT-ATATACACACATACATATGTAT chr4 + 94230402 60831540 60831539 60831623 60831540 60831539 60831623 84 TCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT .............:.:.......:.:...........:.....x:x..x......x.....-:.x.:::.:...:::.:.:... 61M1I22M 62/83 74.7% 84/94230402 0.0% 1/83 1.2% 63306670 NA +3148 chr4 + 190214555 124138215 124138214 124138327 113 CTCTCTCT-ATATATATATATATATACACACACACACACACATATATACATATATATATATACACACATACATATGTATATGTATGTC---------AAATACCACATGCTCTCACTTACAAG chr4 + 94230402 89823920 89823919 89824042 89823920 89823919 89824042 123 CTTTTTCTGACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCCCATGAGAAAAAATAAAATACTCTGAGTCACAAG ..:.:...-.:x.......:x...:................x....xx:.......::...x.xx.xx..:..::x.x..:x.xx:..---------...x.:x.x..:....x.x.:..... 8M1I79M9I26M 77/113 68.1% 123/94230402 0.0% 10/113 8.8% 34314295 NA +3068 chr4 + 190214555 124138221 124138220 124138306 86 CTATATATATATATATATACACACACACACACACATATATACATATATATATATACACACATACATATGTATATGTATGTCAAATA chr4 + 94230402 74671075 74671074 74671160 74671075 74671074 74671160 86 CTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATA ..:..............................x.x.x.x.:.xx..x.x.x.xx:.x.x..:..x.x.x.x:x:..x..:..... 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% 49467146 NA +3300 chr4 + 190214555 124138223 124138222 124138298 76 ATATATATATATATATACACACACACACACACATATATACATATATATATATACACACATACATATGTATATGTAT chr4 + 94230402 54005692 54005691 54005767 54005692 54005691 54005767 76 ATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT ....:...x..........:.............x.x..x::.x:xxx.::.:.x.x.xx............x.... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 70132531 NA +3123 chr4 + 190214555 124138228 124138227 124138275 48 TATATATATATACACACACACACACACATATATACATATATATATATA chr4 + 94230402 89823932 89823931 89823979 89823932 89823931 89823979 48 TATATATGGATACACACACACACACACACTTATAACTATATATACGTA .......:x...................:x....xx........::.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 34314296 NA +3315 chr4 + 190214555 124148125 124148124 124148181 57 TTTGTAAAAGGCCCTTCCTTCTTTCCTTCCTTTCTCTTTCCCTCTTTCTTTCTCTCC chr4 + 94230402 89601102 89601101 89601158 89601102 89601101 89601158 57 TTTGTGAAACACCTTTCTCTCTTTCTCTCCTTTCCCTTTTCTTTACTCTTTCTCCCC .....:...x:..:...::......::.......:....:.:.:x:........:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 34547023 NA +3093 chr4 + 190214555 124180544 124180543 124180603 60 GTTTTCTTCCAATGTTTTTGTTTGTTTGTTTATTTGTTTGTTTTTTTGAGGCGGAGTCTC chr4 + 94230402 43031791 43031790 43031849 43031791 43031790 43031849 59 GTTTCCTTGTGGT-TTTTTGTTTGTTTGTTTATTTTTTTGGTTTTTTTTGGAGGACTCTC ....:...x:::.-.....................x....x......xx..x...x.... 13M1D46M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% 81148753 NA +3240 chr4 + 190214555 124205327 124205326 124205409 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGTATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:...........::........x.xx.x.x.x..........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 48172130 NA +3021 chr4 + 190214555 124206655 124206654 124206713 59 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x....:.:...........::........x.xx.x...x.:........x:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 48173449 NA +3295 chr4 + 190214555 124206779 124206778 124206836 58 TCTCTCAAAAAAAAAAAAAAAAAAAAAACCAACCAAAAAAAAAAAAAAATAAGAAGGA chr4 + 94230402 60474939 60474938 60474996 60474939 60474938 60474996 58 TTTCTCAGGAAAAATAAAAAAAAAAAATCCAAATAGAAAAAAAAAATCATAAAGAGAA .:.....::.....x............x....x:.:..........xx....::..:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 63731840 NA +3185 chr4 + 190214555 124262892 124262891 124263024 133 TTCTCTTATTC----CTTTCTTCCTCCTTCTTTC---TGCCCTGCTTCCCCTTTCCTCCCTCTTTCTCTCTTTCTTTTCCCTTTCCTTCCTTCCTTTCCTTCCTTCCTTCCCTCCTCTTTCTCTTTTCCTTCCCTTTATT chr4 + 94230402 64726452 64726451 64726584 64726452 64726451 64726584 133 TTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCA-------TTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTT ..:...x....----..:.x......x.xx...:---....:.x..x.::x..x:.x-------.:.x.x..:.x....:...:.:..:x.xxxx..::..::.:.:...:.x.:....................:.x.. 11M4I19M3I20M7D76M 84/126 66.7% 133/94230402 0.0% 14/126 11.1% 59536440 NA +3305 chr4 + 190214555 124262985 124262984 124263117 133 TCCTTCCTTCCCTCCTCTTTCTCTTTTCCTTCCCTTTATTCTTTCTTTCCCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTC------TTTCTTTCTTT------CTTTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCCTTTCT chr4 + 94230402 52146249 52146248 52146391 52146249 52146248 52146391 143 TTCTCTCTTCCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTC--TTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTCTTCTCCACTTCTACTCCCTTTT .:..::..........:...:.:......xx.x::.x.....:x:.x.:.--....x..xx..:..x:x:.:...::.:.x.------.x.x.x.....------.........::....:....::::x...::x:...:..:. 50M2D30M6I11M6I40M 84/131 64.1% 143/94230402 0.0% 14/131 10.7% 72116736 NA +3032 chr4 + 190214555 124263003 124263002 124263083 81 TTCTCTTTTCCTTCCCTTTATTCTTTCTTTCCCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 86491064 86491063 86491144 86491064 86491063 86491144 81 TTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT ..:.:....::..:::..:.xxx..:.::...:x:x:.............:......:::.::.::...x.:....::.:. 81M 49/81 60.5% 81/94230402 0.0% 0/81 0.0% 37771939 NA +3073 chr4 + 190214555 124263047 124263046 124263105 59 TTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTT chr4 + 94230402 77533337 77533336 77533395 77533337 77533336 77533395 59 TTCTATCTTTTGGTTTATTCTTTTTTTTTTTCCCTTTCTTTGCTCCTTTTTCTTTGCTT ....x......xx...x......:...:....::.......x:..:..:..::..x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 46729710 NA +3611 chr4 + 190214555 124267566 124267565 124267648 83 CATGGTGGCATGCCCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...x.x......:.........::::........x:xx.x.:.x.......:...:.:..x..x:.....:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 48234369 NA +3082 chr4 + 190214555 124303016 124303015 124303069 54 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........::........x.xx.x...x::........:..:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 48269805 NA +3302 chr4 + 190214555 124310839 124310838 124310905 67 AGTGACACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:::..:.--....:.:...........::........x.xx.x...x.:.......:...:.. 11M2D54M 49/65 75.4% 65/94230402 0.0% 2/65 3.1% 48277639 NA +3282 chr4 + 190214555 124333039 124333038 124333124 86 TGCATGGTGGCGTGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTG-AACCCAGAAGCTTTGGGCTGTAG .:..::....--...:.x....x.:...........::........x.xx.x...x......-.....:.:..x:xx:..:..:.. 10M2D50M1D23M 60/83 72.3% 83/94230402 0.0% 3/83 3.6% 48299844 NA +3721 chr4 + 190214555 124431276 124431275 124431340 65 TGATACACA--------CCTGTAATCCCAGCTACTTGAGAGGCTGAGGCATGAGAATCGCTTGAACCTGGAAG chr4 + 94230402 76033192 76033191 76033264 76033192 76033191 76033264 73 TGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .........--------.x....:.:............:........x.x..x...x.:........::.... 9M8I56M 54/65 83.1% 73/94230402 0.0% 8/65 12.3% 48398084 NA +3071 chr4 + 190214555 124441126 124441125 124441183 58 CTCTTTGGTTAAATTTATTCCTAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT chr4 + 94230402 80571088 80571087 80571145 80571088 80571087 80571145 58 CTCATTGCTTACACTGCCTCCCAGCTCCCTCTTTCTCCCTCTCCCCCTCCCTTTTTGT ...x...x...x.:.xx:...:.....:....:....:.....:.:...:..:.:... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 43870038 NA +3233 chr4 + 190214555 124441139 124441138 124441204 66 TTTATTCCTAGC-------TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578247 26578246 26578319 26578247 26578246 26578319 73 TTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...::..:.:..-------.:...................:.:.:.:.:.xx..:...:...x...::..... 12M7I54M 49/66 74.2% 73/94230402 0.0% 7/66 10.6% 97862892 92351663 +3235 chr4 + 190214555 124441151 124441150 124441202 52 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578268 26578267 26578319 26578268 26578267 26578319 52 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...................:.:.:.:.:.:x..:...:...x...::..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 97862883 92351672 +3129 chr4 + 190214555 124441153 124441152 124441206 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 97862887 92351668 +3046 chr4 + 190214555 124441155 124441154 124441208 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.x.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 97862889 92351666 +4244 chr4 + 190214555 124463035 124463034 124463107 73 ATCTGGTAGGTGTAGTTGGGGCAGGACACCAGCAGGAAAAGCCACGTGAAAGGGTTCTTGGTGAGGTATGGGA chr4 + 94230402 50556469 50556468 50556541 50556469 50556468 50556541 73 ACCTCATAAGTATAGTTGGGACAGGATACCAGCAAGAAGAGCCACGTGAAGGGGTTGTAGGTTGGACTTGGAA .:..x:..:..:........:.....:.......:...:...........:.....x.x...x:.::x...:. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 73906566 NA +3604 chr4 + 190214555 124463336 124463335 124463407 72 GAGAAGTGGTGCATGAACAACGTCTCCAGCAGGTGCTTGACGTAGTGCAATGAGTGACAGATGCAGGTGAGG chr4 + 94230402 50565032 50565031 50565103 50565032 50565031 50565103 72 GAAAACTTGTGAACAAATAATGTCTCCAGAAGATGTCTGATGTAGTGCAAACAATGACAGAAGCAGGCCAAG ..:..x.x...x.::..:..:........x..:..::...:.........xx.:.......x.....:x.:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 73898304 NA +3137 chr4 + 190214555 124470289 124470288 124470397 109 TTATATGACTCCTTTCTTTGCTCTTCTCTCTTCTTTCTTTTTTCTTTCTTTCTTCTCTTTTCCTTTCTTCCTTTCTTTGGCTACTATACTACTTCTTTCTTTCTCTCTT chr4 + 94230402 82976672 82976671 82976775 82976672 82976671 82976775 104 TTGTATGGCTCTCATCT-----CTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCATATTAAATCACCTTCTCACCCCT ..:....:...::x...-----..:......:.....:.......x...xxx.:.:....x::x.........:x...xx::x::...:..xx..x:::.:..x.:.:. 17M5D87M 66/104 63.5% 104/94230402 0.0% 5/104 4.8% 41493617 NA +3134 chr4 + 190214555 124470443 124470442 124470529 87 TCCTCTCCCTTCCCTTCCTCCTTCCCTCCCCCTTCCTTCCATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 53764542 53764541 53764628 53764542 53764541 53764628 87 TTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC .::..:..::...:......:.........:.:x.x::.xx.:.::.:.x.:.::..x....:::..x...:.x:.x...:.:..:. 87M 52/87 59.8% 87/94230402 0.0% 0/87 0.0% 70705901 NA +3656 chr4 + 190214555 124470491 124470490 124470642 152 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCTTTCCTTCCCTTCCTTCCCTCCCTCCCTCCATCTCTCCCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTC-TTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTT---TCTTTCTCCTCCATTCTT ..:..x:..:x..x.::.....:.......:x.:.x::.x:.::.:.x..x:.:::.x:x...:..x:x.:.x.::..x.:.:...:.:...-...xxxx..:x.....x:x.:.:.:.x....:......---........:.:.x..... 92M1D38M3D18M 89/148 60.1% 148/94230402 0.0% 4/148 2.7% 74294224 NA +3020 chr4 + 190214555 124470643 124470642 124470696 54 TCTTTCTTTCTTTTTCTTTCTTTTTCTTCTTTTTTTTCTTTCTTTCTTTCTTCC chr4 + 94230402 66421027 66421026 66421080 66421027 66421026 66421080 54 TTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTC .:....:.......:....:.x...........x....:x....:.::.:.::. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 58049616 NA +3339 chr4 + 190214555 124491080 124491079 124491173 94 GGAGGAGGAGAAGAAGAAGGAGGAG-GAGGAGGAGGAGAAGAAGAAAGGGGGGAGGGGGAGGGGGGAGGGGAGAAGCTAATTATAAAGCTCTTAT chr4 + 94230402 70338956 70338955 70339049 70338956 70338955 70339049 94 GGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAGC-AACCGGGAGGCTCTAAT ...:.:...:..:.....:..::x.-......:.:...::.::.x::......x..x..:.x......:.x::....-..:::x:.:.....x.. 25M1I51M1D17M 61/93 65.6% 94/94230402 0.0% 2/93 2.2% 54152124 NA +3106 chr4 + 190214555 124524194 124524193 124524238 45 TGATACTTATTACTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTT chr4 + 94230402 17384400 17384399 17384444 17384400 17384399 17384444 45 TGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ...:.:.....:x.................:.:.:.:........ 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 107139794 83074761 +3171 chr4 + 190214555 124524198 124524197 124524239 42 ACTTATTACTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTTT chr4 + 94230402 6554015 6554014 6554056 6554015 6554014 6554056 42 ATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT .:..:...:...................:.:.:......... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 117970183 72244372 +12918 chr4 + 190214555 124526372 124526371 124526702 331 AAAGTAGTGGCA-----AAAGACCAGGT-CGACAGAAACACTGAGAGAAATCATATACCGAGGAAGTGCTCCATTTCCTTTGTTCTTTATGTGTTCTATAAATATTTCATGTATTTGTTAAAGCTGTGTTATTGCTGGAAGCCAGCCTTCTCCCTTGTTTAATTCTTCTCCCATCCTTGAAGCCTAGAAAT-GTTTGAAATAT----AGAGTCTGCATTCCTTGTACATG-TTTTGTTAATAAACAACATGTGAAAATTAGGGATAAAAACTTCTTAAAAGGAAGAGAAAGAAAAATAACTAGGATGACTGGCAAGATAAAAGTCTCAACACCCTGGGGGTGA chr4 + 94230402 54498326 54498325 54498668 54498326 54498325 54498668 343 AGAGTAGTGACATGGAAAGGGACTGGGTATTCCTGAAACCCTGATAGAAGTTGTACATAGAGGAAATGCTGCATTTCCTTTGTTCTTTATATGTTCTATAAATATTTAATGTGTTTGTTAAAGCTATGTTATTTCTGGAAGCATGCCTACTCTCTTGTTTAATTTTTCCTGAATCCTTCATGGCTGCAGATAGCTTGGGATACACAGAGATTTAGCATTCAATATTTATGCTCTTGCTAATGGACACCACATGAAGATTGGGAATGTAAACGGGTTGCAAGGAACAGAGAGGGAAATTTTTAGCACATCTAAAAAAGGACTGGGCTTAGAGTCCTTCGGGTGA .:.......:..-----.::...::...-:xx.x.....x....x....:.::..:.:x......:....x...................:................x....:............:.......x........xx....x...:...........:...::xx......x.x.x..:x.:..-.:...::...:----...x.:x......xx.:.x:...-.:...:....::...x..::....:...:..:..:x....xxx..:x......x...:..::....xx:...x.::x..::x..::x.xx:.x..:.:x::...xx...... 12M5I11M1I162M1I11M4I23M1I112M 234/331 70.7% 343/94230402 0.0% 12/331 3.6% 70028046 NA +3489 chr4 + 190214555 124547737 124547736 124547803 67 TTACAAGAGAAATCTCTTTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248035 75248034 75248088 75248035 75248034 75248088 54 TCACAAAATAAATCCTTC-------------CTCTCTCTCTCTCTCTCTCACACACACACACACACa .:....:.x.....::.:-------------.................................... 18M13D36M 48/54 88.9% 54/94230402 0.0% 13/54 24.1% 49299702 NA +3102 chr4 + 190214555 124547766 124547765 124547801 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 111946462 78268093 +3033 chr4 + 190214555 124547768 124547767 124547801 34 CTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248055 75248054 75248088 75248055 75248054 75248088 34 CTCTCTCTCTCTCTCTCACACACACACACACACa .................x................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 49299713 NA +3316 chr4 + 190214555 124547768 124547767 124547803 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 111946464 78268091 +3670 chr4 + 190214555 124554872 124554871 124554943 72 CACAGTGATGCACATCTGTAGTCCCAGCTACTCGAGAGGCTGAGGGGAAAGGATCACTTGAGCCCAGGAGTT chr4 + 94230402 76033197 76033196 76033266 76033197 76033196 76033266 70 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .......:.....:.--.....:.........:..:........xxxx:x.:.x.......:.....:..:. 15M2D55M 54/70 77.1% 70/94230402 0.0% 2/70 2.9% 48521675 NA +3209 chr4 + 190214555 124566953 124566952 124567024 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACGGGAGAATCGCTTAAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x.xx.x...x.:...:....::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 48533747 NA +3176 chr4 + 190214555 124583971 124583970 124584061 91 AGAGGGACCTGACCATTGAAAGAAAAA-----CAAACAAGCAGAAAGCAACTACAACAGCATCAACAACAAAAAAAGCCACCACAAAAACCACATC chr4 + 94230402 14362573 14362572 14362668 14362573 14362572 14362668 96 AGAGAGCTCAGGATGATGAAAAAAAAGGAGCTTAAAAATGCAAAAAGCAACAACAACATCAACAAAAACAAAAAAAATGAAATAAAAAACTGCATC ....:.x:.x.:x::x.....:....:-----:...x.x...:........x......x..x...x..........::x.xxxx......::.... 27M5I64M 63/91 69.2% 96/94230402 0.0% 5/91 5.5% 110221398 79993157 +4602 chr4 + 190214555 124629868 124629867 124629998 131 CAGAAGTAACTGAGCAAGCCTGGGGGATAGTGGAATTTCATTTTCAACATAATTAGCTCTGTAATTGTAAGGCCCAGCTTAGTAGATGTATTTGGAAATGTAATTAATTATGATTGATTTAAACACTGTTT chr4 + 94230402 46668268 46668267 46668398 46668268 46668267 46668398 131 CAGAAGAAGCATGGCCATTTTAGATAAGTGTGCAATTGCATTTTCAACATAATTAGGTGCCTAATTGTGCGCCCAGGCCTTGCTGTAGTATTTGCACGTGTATCTAATTATGATTTATCTAAAAGCTCTCT ......x.:.xx:..x.x::.:.:x:.xx...x....x..................x.x:x.......:x.x..x:..:.x.:x.xx.......x.x:....x:...........x..:....x:..x.:. 131M 88/131 67.2% 131/94230402 0.0% 0/131 0.0% 77961600 NA +3105 chr4 + 190214555 124671178 124671177 124671326 149 CCATGGTCCAGTAGGTGTTCCACAATCTCTCTATGTCCCATGTATGCTGCTGCTATCAAAGCAGTTCTACCTTCATTATCAGCTTTGTTCACTTCAGCGCCATGTTGTAGCAAATTCAGTACAATATCCTCGTGTCCTCCCCATGCTGC chr4 + 94230402 52271873 52271872 52272021 52271873 52271872 52272021 149 CCTTGGCCAAGTAGTAGTGCCACCATCTCTTCGTGGCCTTCTCTAGCTGCTTCCATTAGCGGTGTGTATCCCTCATCGTTTACCTCTTCCAAGTTAGCTCCACGTTCAATCAACAAAGCTGCCAGTTCAACGTGCCCTCCACAAGCTGC ..x...:.x.....xx..x....x......:::..x..:x:x:xx......x.:..:.:x.xx..x:xx..:....::.:x:.:.:x.:..xx.:...x...:...xx.x...xxxx:x.:.x.xx..xx....:.....x..x..... 149M 87/149 58.4% 149/94230402 0.0% 0/149 0.0% 72399305 NA +3121 chr4 + 190214555 124715685 124715684 124715768 84 TATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATGTATATGTGTATGTGTGTATATGTATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x...:.x...:.:...:.:...:...xx..:.:x::..::.......x:..:....x....:::::...:::.:... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 38881152 NA +3298 chr4 + 190214555 124733958 124733957 124734039 82 GTGGTGGCGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATCGCTTGAACCTGGGAAGCCTAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::.......:x.xx.x...x.:........::.:.:x::.:..:..:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 48700757 NA +3519 chr4 + 190214555 124744009 124744008 124744122 114 ATGAGATGAGCGTGTATGCGTGTATGTGCATACGTGTGGATGTGTGTGCAAGTGTGTATATGTGAGTGTGAGCATGTGGGAGCATGCACGTGTGTGTGTGTGTGATGGCAGGTT chr4 + 94230402 3414914 3414913 3415024 3414914 3414913 3415024 111 ATGAGATGGGC---TGAAAATGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGAGCTCGCCTGGCTCTGGCTGGATGATGACAGTTT ........:..---.:x:x:..x:.....x..:.....x......x..:.x.....:.:.xx..x.....x:...::::....x:..x:.xx.x..xx..x:.....:...x.. 11M3D100M 73/111 65.8% 111/94230402 0.0% 3/111 2.7% 121329095 68885460 +3490 chr4 + 190214555 124744615 124744614 124744696 82 AGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 86089083 86089082 86089164 86089083 86089082 86089164 82 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGG ..:.::.::....:.:x.x...:..:...:...:.....x..:::...x...x........:...x..x..:::x.:...:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 38655532 NA +3184 chr4 + 190214555 124744621 124744620 124744676 56 AAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 83419839 83419838 83419894 83419839 83419838 83419894 56 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAA ........x...:..x..x::....:x....x...x..:.............:... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 41324782 NA +3389 chr4 + 190214555 124744665 124744664 124744772 108 AAAAAGAAAGAAAGAAAGAAAGA-AAGAAAGA---GAGCGAGGGAGGGAGGGAGGGAGGACACAGAGGGAGAAAGAAGAAAGAAAGAAAGAGAAAGAGAGAGAGGAAAAGAG chr4 + 94230402 15855375 15855374 15855480 15855375 15855374 15855480 106 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGG------GAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ..:.:x.....:...:.::x:..-........---.::.:..xx.:..------.:.:..:x.....:....:..........:::....::x.:..:...:x.:.....:. 23M1I8M3I13M6D58M 69/102 67.6% 106/94230402 0.0% 10/102 9.8% 108889290 81325265 +3082 chr4 + 190214555 124776750 124776749 124776832 83 CATGGTTGCACATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCTGGGATGTTGAGGTTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x.::..:.--....:.::..........::........x:xx.x...x..........::.:.xx..x:..:.::.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 48743553 NA +3155 chr4 + 190214555 124800218 124800217 124800284 67 AACAGGTAAATTAAATCATTCTAGAGCATTAATATGTATATATTACATCACTGTAAAATCATAAAGT chr4 + 94230402 73992073 73992072 73992139 73992073 73992072 73992139 67 AACAGGGACATCTAATTCTTCAAGAACATTAACTTGTATTTTTATTATCACTGTAAAACCCTAAAGT ......x.x..:x...:x...x...:......:x.....x.x.xx:............:.x...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 50808145 NA +3133 chr4 + 190214555 124808565 124808564 124808626 62 ATAGAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030065 90030064 90030129 90030065 90030064 90030129 65 ACAGATAACTGAAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA .:...x..xx:...x.......---:...::..............:.:.:............x.. 22M3I40M 49/62 79.0% 65/94230402 0.0% 3/62 4.8% 34778500 NA +3282 chr4 + 190214555 124808573 124808572 124808628 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 123313573 66900982 +3496 chr4 + 190214555 124808575 124808574 124808630 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 123313575 66900980 +3174 chr4 + 190214555 124808580 124808579 124808633 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 39260160 NA +3670 chr4 + 190214555 124808582 124808581 124808651 70 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT---ATATATATATTCGTTT chr4 + 94230402 85548420 85548419 85548492 85548420 85548419 85548492 73 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTT .............:.:x.....:...:.:.:.::...:..........x.....---.:..:x....:.:... 54M3I16M 54/70 77.1% 73/94230402 0.0% 3/70 4.3% 39260162 NA +3305 chr4 + 190214555 124808584 124808583 124808637 54 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 39260164 NA +3222 chr4 + 190214555 124808586 124808585 124808639 54 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............x.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 39260166 NA +3008 chr4 + 190214555 124808588 124808587 124808641 54 AAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...........x.x.xx.....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 39260168 NA +3829 chr4 + 190214555 124828087 124828086 124828169 83 CGTAGTGGCGCACACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:....:--......:.........:::.........x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 48794890 NA +3143 chr4 + 190214555 124870718 124870717 124870804 87 AGAACTTACTTGTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 57372014 57372013 57372099 57372014 57372013 57372099 86 AGAACATGCTGG-CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT .....x.:..x.-..:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x.. 12M1D74M 57/86 66.3% 86/94230402 0.0% 1/86 1.2% 67498704 NA +3466 chr4 + 190214555 124870731 124870730 124870871 141 CTCTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTT-----CTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCT chr4 + 94230402 19215416 19215415 19215566 19215416 19215415 19215566 151 CCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:.:::.::.:...:...:...xx....-----......x..::...x......xxx....x.x..::::xx:......:.x.:::..:.x:.x.:....-----:.:....xx...:.....x:.:.x:x..:..::x.:....x..... 28M5I67M5I46M 87/141 61.7% 151/94230402 0.0% 10/141 7.1% 105655315 84559240 +3003 chr4 + 190214555 124870742 124870741 124870845 104 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTT chr4 + 94230402 39401937 39401936 39402040 39401937 39401936 39402040 104 TTGTCTTCCTTCCTTCTGTCTCTTTTCCTCCTTTTGACTGTTGCTGTCTTCTCTCCACTGCTCACAGCCAAGCTTTGTTTGTCTCTTTCTTGCCTTTTTTTTCT ..x::...:...:....x...:.:..:..:::...xx:.x..x..x....:::.:.x:.x:.:x:xx..xxx....x...x.:........x....:...:.:. 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% 85468805 NA +3642 chr4 + 190214555 124870781 124870780 124870902 122 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTT----CCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC---CCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx.x.:..::....:....:.:x..::.:.x....xx.....x.:.----....:x:.:....x:xx...:......---.::..:..:...:........:.x.:. 65M4I27M3D27M 77/119 64.7% 123/94230402 0.0% 7/119 5.9% 61173664 NA +3902 chr4 + 190214555 124870797 124870796 124870931 135 CTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGC---------CTTTACTTTTTCACAGTCTTTCTCTCCC---CTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.......:xx:x..:.:.....:......:x..::.:.x:...xx.....x.:.:xxx.---------....x...::.:x.xx:.........:.---.......:...:..::.....x... 70M9D28M3D25M 83/123 67.5% 123/94230402 0.0% 12/123 9.8% 61173680 NA +3078 chr4 + 190214555 124870802 124870801 124870861 60 TTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTT chr4 + 94230402 36924288 36924287 36924347 36924288 36924287 36924347 60 TTGCTTTCCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTT ..x.......x.....x.:.....x...:......:..::::..:..:..:.x...x... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 87946514 NA +3443 chr4 + 190214555 124870819 124870818 124870930 112 TTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTC----TCTCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 21704059 21704058 21704173 21704059 21704058 21704173 115 TCTCTCTTCTTTTTTGCAGCTAGTTCCTCTTCTTT-TTTCTTTCTGATTCTTTCAGACTGTTTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTT .:...:.::..:...x.xx..xx:.:::.......-.........xx:...:..xxx..x.::.....x:..x....x.......----x:...x.......:.:...::x..... 35M1D49M4I27M 75/111 67.6% 115/94230402 0.0% 5/111 4.5% 103166760 87047795 +3070 chr4 + 190214555 124870860 124870859 124870932 73 TTCTCTCTC-TCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757784 53757783 53757857 53757784 53757783 53757857 74 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ......::.-...:....x:::...xxx...::..:::.:.:.:...::.:.....::.......:........ 9M1I64M 49/73 67.1% 74/94230402 0.0% 1/73 1.4% 71113076 NA +3048 chr4 + 190214555 124870884 124870883 124870933 50 CCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 70062265 70062264 70062314 70062265 70062264 70062314 50 CCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTT ......:.x...:..x::......x.................::..x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 54808619 NA +3011 chr4 + 190214555 124870890 124870889 124870947 58 TTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGTCTTGCTCTGT chr4 + 94230402 45847278 45847277 45847335 45847278 45847277 45847335 58 TTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTTCTGT ..x.:..:.x...........:..................:::xx:.x:x..:..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 79023612 NA +3010 chr4 + 190214555 124870892 124870891 124870931 40 CCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 13065005 13065004 13065044 13065005 13065004 13065044 40 CCTTTCTCTTTCTCTCTCTTCTATCCTTTTTTTTTTTTTT .........:..........:.x.::.............. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 111805887 78408668 +3012 chr4 + 190214555 124870892 124870891 124870927 36 CCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847282 45847281 45847317 45847282 45847281 45847317 36 CTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...x.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 79023610 NA +3299 chr4 + 190214555 124879778 124879777 124879851 74 GCGCACCTGTAATCCCAGCTATGTGGGAGGCTGAGGCACAAGAATCACTGAAACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:.:.......:x..::........x.x::x...x....x:.......:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 48846574 NA +3068 chr4 + 190214555 124907190 124907189 124907254 65 TACATGTGTGTGTTTATGTATGTGTGTTTGTGTGTGTATATATATATGTATGTATGTATATATAA chr4 + 94230402 86633930 86633929 86633994 86633930 86633929 86633994 65 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAA .:.:..:..:x..x.....x...:.::x..:...........:..x......:..x.:...:x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 38273260 NA +3208 chr4 + 190214555 124912155 124912154 124912240 86 TTTTTTTTATACTGCCTTAAAGATTCTCTCTTTGTCTTTGACTTTTGACAATTTGATCACAATGTGACTTTTTTTTTTTTTTTTTG chr4 + 94230402 18293798 18293797 18293880 18293798 18293797 18293880 83 TTTCTTCTATAT---CTGAAGTAATTTCTCCTGCTCACTGACTTCCCAAAATGTGATGCCAATAAGTCTTTTTTTTTTTTTTTTTG ...:..:....:---..x..:x.x.:....:.xx..x:......::x.x...x....xx....:x.x................... 12M3D71M 60/83 72.3% 83/94230402 0.0% 3/83 3.6% 106618357 83596198 +3000 chr4 + 190214555 124915619 124915618 124915707 89 AAATACATGGAGGATTTTCTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 36195235 36195234 36195323 36195235 36195234 36195323 89 AAATAGCCGGATGTTTATATTGACTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTT .....xx:...x.x..x.x..xx.....:...x.xx...::x....:.xx.xx:x:..........x.....:.......::...x... 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 88720384 NA +3199 chr4 + 190214555 124915628 124915627 124915705 78 GAGGATTTTCTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72188206 72188205 72188283 72188206 72188205 72188283 78 GAAGATTTGCTTTAATGTTTCTCTATGTAACTTCCTTTCTGGGTTTCTCCTCTCTGCACTTTTTTTTTTTTTTTTTTT ..:.....x....xx.x.:.:...x...xx...:......xxx.....::::.::x:x:................... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 52727422 NA +3173 chr4 + 190214555 124915648 124915647 124915709 62 TTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 73754472 73754471 73754533 73754472 73754471 73754533 62 TTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTTG ...:..x.x.x..:..x.x.x....:..x:...x...::..:.................... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 51161176 NA +3317 chr4 + 190214555 124927854 124927853 124927927 74 GTGCGCCTGTAGTTCCAGCTACCCGGGGGGCTCAGGCAGGAGAATCACTTAAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x...............::.:::....x..x.xx.x...x.....:....::.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 48894650 NA +3096 chr4 + 190214555 124946361 124946360 124946430 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 48913164 NA +3342 chr4 + 190214555 124958316 124958315 124958393 78 AATGCTTGCACTAGGCCTTATATAGAGAGAAATGTATATATACATATGTGTGGGTGTGTTTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857579 6857578 6857656 6857579 6857578 6857656 78 AGTATCTGTTCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .:.:::..:x..:...x.x..x:xxx:......:....::......:..:.:.:.....x...x...........x.. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 118100737 72113818 +3593 chr4 + 190214555 124986830 124986829 124986971 142 TTAACTTTACTGTTTATTCCCATATCAGCTATAGC----------GGAAATCTGAAGTTAGCTATAATGGAAGACAGTCTCTTTGTTTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTTTGATAAGTTTAAAATA chr4 + 94230402 45847206 45847205 45847344 45847206 45847205 45847344 139 TCAGTTATGCTGTTCCTTGCCTAGTCAGCTGTCTCCAGTTCTGCAAGAAAACTAAGGCTGGCTTTAAG----------CTGGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTTCTGTAGG---AAAATA .:.::.x.:.....:x..x..xx:......:.xx.----------:....x..:.:.:.:...x...x----------..xx...::.:..x.............:................:::x...x.x.x..:x:..:.---...... 35M10I23M10D65M3D6M 89/129 69.0% 139/94230402 0.0% 23/129 17.8% 79139624 NA +3060 chr4 + 190214555 124986868 124986867 124986965 98 AATCTGAAGTTAGCTATAATGGAAGACA-----GTCTCTTTGTTTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTTTGATAAGTTT chr4 + 94230402 68974649 68974648 68974748 68974649 68974648 68974748 100 AATCTGAAGAGAAAAAAGGAGGAAGAAATACAAATCTACTCTTTTCTGTTCT---TCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCTGTTCAGTTT .........xx.:xx.x::x......x.-----:...x:.:x.....x:...---..xx..:....................x..x..::..:..x.x..... 28M5I19M3D48M 68/95 71.6% 100/94230402 0.0% 8/95 8.4% 56012219 NA +3145 chr4 + 190214555 124986890 124986889 124986938 49 AAGACAGTCTCTTTGTTTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 + 94230402 6554008 6554007 6554056 6554008 6554007 6554056 49 AAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..:....x:.:x..:..:::...............:............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 118432882 71781673 +3043 chr4 + 190214555 124986898 124986897 124986945 48 CTCTTTGTTTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907963 56907962 56908010 56907963 56907962 56908010 48 CCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT .:....x:.:..:.x:::........................:..... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 68078935 NA +3112 chr4 + 190214555 124986906 124986905 124986942 37 TTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 + 94230402 6554020 6554019 6554056 6554020 6554019 6554056 37 TTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..x..................:............... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 118432886 71781669 +3012 chr4 + 190214555 124986908 124986907 124986943 36 CTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847282 45847281 45847317 45847282 45847281 45847317 36 CTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:.x.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 79139626 NA +3351 chr4 + 190214555 124993006 124993005 124993088 83 CGTGGTGGTGGGCGCCTATAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--.:..:.:...........::...:....x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 48959809 NA +3096 chr4 + 190214555 124996606 124996605 124996675 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 48963409 NA +3209 chr4 + 190214555 125069415 125069414 125069486 72 TGCTATAAAAATAGAAAAATGCACACACACATAGGCACACATACACACACATAG-AAGCCACCA--TTTTTATAA chr4 + 94230402 66743626 66743625 66743700 66743626 66743625 66743700 75 TGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCAGTCTTCAGGTTTTTATAA ....x..x.......x.x..x:....x...x:.........:.........:..-x..:.x:..--......... 54M1I9M2I9M 57/72 79.2% 75/94230402 0.0% 3/72 4.2% 58325789 NA +3073 chr4 + 190214555 125097328 125097327 125097378 51 TTATTTATGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGACAAGAGCAG chr4 + 94230402 27325517 27325516 27325567 27325517 27325516 27325567 51 TTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCAG ...xx.............:.........::..:.:.:.:...x..x..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 97771811 92442744 +3175 chr4 + 190214555 125116971 125116970 125117037 67 ATATATGCATATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:...::..:..:.....:x::.:....x::.......x......:......:xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 79053672 NA +3013 chr4 + 190214555 125116978 125116977 125117045 68 CATATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:..:....:..:.:....x.::::.:.x:..:...:.x......:......:xxx.......:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 79053680 NA +3055 chr4 + 190214555 125116981 125116980 125117047 67 ATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:....:..:..:.:.:..x.:::....x:..:...:.x......:......:xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 79053682 NA +3159 chr4 + 190214555 125126365 125126364 125126444 80 CATATATGTCCGTGTGTGTGTATATATATACACATATATATGTCTATGTGTGTGTGTGTGTCTATATACACACACACACA chr4 + 94230402 85834537 85834536 85834614 85834537 85834536 85834614 78 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATA--CATATGTAAATACATGTTTATGCACACATACACACA ...x.:....:..........:.:.:...xx.::..x::..:--:..:...:x:.:::...:...::.....:....... 42M2D36M 52/78 66.7% 78/94230402 0.0% 2/78 2.6% 39291828 NA +3683 chr4 + 190214555 125126381 125126380 125126448 68 TGTGTATATATATACACATATATATGTCTATGTGTGTGTGTGTGTCTATATACACACACACACACTCA chr4 + 94230402 47135177 47135176 47135244 47135177 47135176 47135244 68 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACTCCTA .........::........:x..xx..:.....:::...:.....x..:.:......:.....x.::. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 77991204 NA +3310 chr4 + 190214555 125145067 125145066 125145233 167 GAAAAAAAAAAAAAAACAAAAAAAAAAAAAACAAAATATATATATATATATATATATAGTTTTTATT---------GTTGTGTTTGTTTGCTTGTAATGAGGAAAAGTTACTTAAGAGATGCAAACTGACTTCATAACTTAAACTTTTTCATCTCTAAACAACGCTAAGTGATAAA chr4 + 94230402 89364886 89364885 89365042 89364886 89364885 89365042 157 GAAAAAAAAAACAAAACAACAAAAAAAAAGATTCTCTATTTCCAGATATATATATATATTTTTACTTTACAAGAACGTTGTTCTTTTTT-----------TAAAGAATCAGTTAA-----ACGAATTGCTTTAACATTTTAA---TTTTATTTTCTAAGAAATATTTACCAAAAAA ...........x.......x.........:.:xxxx...x.x:.x.............x....xx..---------.....x:..x...-----------x:..:.:.:.x....-----:.:..:..x:..x.:.x:....---....xx.:.....:x..:::.x.x::.x... 67M9I13M11D15M5D22M3D31M 102/148 68.9% 157/94230402 0.0% 28/148 18.9% 35780181 NA +3171 chr4 + 190214555 125173178 125173177 125173236 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x......:..:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 49139972 NA +3144 chr4 + 190214555 125180468 125180467 125180540 73 CAAGAC--AAGAAAGAAAAGGAAAGGAGAAAGGAGAAAGGAAAGAAAAGGAAAGGAAAGGAAAGGAAAAAAGAAA chr4 + 94230402 86730448 86730447 86730522 86730448 86730447 86730522 75 CAAGACGAAAGAAAAAAAAGGAGGCAGGTTAAGAGCAAATGAAGAAAAGGAGAGCAAAGGAGAAAAAGCAGGAAA ......--......:.......::x::.xx.:...x..:x:..........:..x......:.::..:x.:.... 6M2I67M 52/73 71.2% 75/94230402 0.0% 2/73 2.7% 38450020 NA +3299 chr4 + 190214555 125180583 125180582 125180687 105 AGGAAGGGAGGGAAAAGAAAGAAGAAAAAGCA-AGCAAGCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 44866506 44866505 44866611 44866506 44866505 44866611 106 AGAAAGACATACAGGACAAAGAAAAACAGGGACAGCAAATAACTAGGAAAGAAATAGAATAATACAGAAAAAATGACAAAGGAGGGGGAAGAAAGAAGAAATGAAA ..:...:x.x:x.::.x......:..x.:.x.-.....::..xx.:........x.:.:x..x.x.....:..x..x.:.::::::.:.........::..x.... 32M1I73M 67/105 63.8% 106/94230402 0.0% 1/105 1.0% 80314077 NA +3342 chr4 + 190214555 125180598 125180597 125180691 94 AGAAAGAAGAAAAAGCAAGCAAGCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 44866518 44866517 44866611 44866518 44866517 44866611 94 AGGACAAAGAAAAACAGGGACAGCAAATAACTAGGAAAGAAATAGAATAATACAGAAAAAATGACAAAGGAGGGGGAAGAAAGAAGAAATGAAA ..:.x:........xx::.xx......x..xx.:........x.:.:x..x.x.....:..x..x.:.::::::.:.........::..x.... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 80314080 NA +3074 chr4 + 190214555 125180606 125180605 125180698 93 GAAAAAGCAAGCAAGCA------------AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112149 41112148 41112253 41112149 41112148 41112253 105 GAACAGGCAAGTGTGCACCAGTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG ...x.:.....::x...------------.:...:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 17M12I76M 64/93 68.8% 105/94230402 0.0% 12/93 12.9% 84068457 NA +3077 chr4 + 190214555 125180619 125180618 125180693 75 AGCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..x....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 84068441 NA +4074 chr4 + 190214555 125180659 125180658 125180831 173 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAAAGATGGGAGGGAGGGAAGGAAGGAAGAGAAAGAGAAAAAGGAAGGAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAATGAAGGAGGAAAAGAAAGAAAGAAG chr4 + 94230402 49044660 49044659 49044821 49044660 49044659 49044821 162 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGA-AAGGTGAAAAATGAAAGAAAA----------GAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG .:.:.....::..x..:::.xx.::.:x:.xx.......x.::x..x.....:x..x...x:...x:..:::...xx..:...:.....-..:.x......x...:...:.----------...:...x....x.:.:..xx:..:xxx.:.:....:...:x:..x..x... 89M1D21M10D52M 101/162 62.3% 162/94230402 0.0% 11/162 6.8% 76135999 NA +3089 chr4 + 190214555 125180662 125180661 125180746 85 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAAAGATGGGAGGGAGGGAAGGAAGGAAG chr4 + 94230402 75817436 75817435 75817520 75817436 75817435 75817520 85 AAGAAACAACAAGAAAAAGACAGGAAGAATGAGGAGGATAAAATGAGAAATAGCAATAAAAATGTCAGAAAAGGAGGGCAAGGAG ......x..x:.:.:.....x..:.....x..::::..x.:.:x......x.xx..x...:...xx..::.:...:..x.:.:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 49363226 NA +3080 chr4 + 190214555 125195483 125195482 125195544 62 TCCTAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033216 76033215 76033277 76033216 76033215 76033277 62 TTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:.........::........x.xx.x...x.:...........:..x.xx:..:..:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 49162267 NA +3089 chr4 + 190214555 125304192 125304191 125304245 54 AAACAAACAAACAAACAAACAAAAAACCTCTAAAATGCACATTAAAAGAGAGCT chr4 + 94230402 33001613 33001612 33001666 33001613 33001612 33001666 54 AAAAAAACAAACAAACAAACAAAAAACCACTAAAGAACCTGTAAAAAGAAAATT ...x........................x.....:x:.x::.x......:.::. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 92302579 NA +3219 chr4 + 190214555 125307587 125307586 125307651 65 GGACATATGTCTATATATATATATATACACACATACACACACACACCCACACTTAGTCACCCTGC chr4 + 94230402 36111763 36111762 36111827 36111763 36111762 36111827 65 GAACGTGTGCCTGTGCGTATATATACACACACATACACACGTACACCCTGGGCTTGTCAGCCAGC .:..:.:..:..:.:::........:..............::......xx:x:.x....x..x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 89195824 NA +3134 chr4 + 190214555 125310194 125310193 125310237 44 TTTTTTGTTTGTTTTTGTTTTTGTTTTTTGTTTGTTTTTTGAGG chr4 + 94230402 12151634 12151633 12151677 12151634 12151633 12151677 44 TTTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTTTTGGGG ..........xxx....x.......................:.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 113158560 77055995 +3615 chr4 + 190214555 125326885 125326884 125326967 83 CATGGTGGTGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGATAGGAGAACCACTCAAACCCTGGGAGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--......:...........::........x:xx.x...x....::.....x.:::x:xx:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 49293688 NA +3165 chr4 + 190214555 125356474 125356473 125356590 117 GTTTTCTACATATGCAGATCATTATAGAAATAATATTCTTCTCTAAATTTGTAGATATAGGGTGTTTTGTTTTTTGTTTTTTTTTTTTTTTTGCCATTTATAGGTTACAAGCTATGT chr4 + 94230402 25342977 25342976 25343093 25342977 25342976 25343093 117 GTATTCTCTTTTTTAAGAGTAGTTCAGAACAAATCTTGGTTTCAAATCTCCAAAGCATCTGATGTTGTATTTCTTTTTTTTTTTTTTTCTTTACCATGTCTAGTTTTTAAGCTCTAT ..x....x:x.x.xx...x:.x.x:....xx...x..xx.:..x..x:.:xx.:::..xx.:....x.:...:..x............:...:....x.x...x..x:.....x.:. 117M 74/117 63.2% 117/94230402 0.0% 0/117 0.0% 100013497 90201058 +3009 chr4 + 190214555 125384980 125384979 125385027 48 ACACACACATATATATATATACATATATATATATATATATATATATTT chr4 + 94230402 74526078 74526077 74526125 74526078 74526077 74526125 48 ACACACACACACATGAACATACACAAATATATACGTATATATGTATTT .........:.:..:x.:.....:.x.......::.......:..... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 50858902 NA +3172 chr4 + 190214555 125396863 125396862 125396970 108 AGTGAAGATATTTAGTAATTTCTGAAGAACATTCATTACATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATAAAAT chr4 + 94230402 89748622 89748621 89748726 89748622 89748621 89748726 105 AGCAAAAACATCACGCAATACCTAGATAATGTG---TACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACAGT ..::..:.:..:xx.:...x:..::.x..::.x---...........xx.x.......x:.......:.x.:.::.:...:.:.:.:x.....:x.x.:.:...x.:. 33M3D72M 66/105 62.9% 105/94230402 0.0% 3/105 2.9% 35648241 NA +3590 chr4 + 190214555 125396873 125396872 125396970 98 TTTAGTAATTTCTGAAGAACATTCATTACATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATAAAAT chr4 + 94230402 46063272 46063271 46063369 46063272 46063271 46063369 98 TTCAGTATTTTTCCTGGCACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGT ..:....x...::xx:.x.....:.::.:.:..:....::...:.:..x.::::.:.x:..:...:.x......:......:xxx.......:..::. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 79333601 NA +3110 chr4 + 190214555 125396894 125396893 125396965 72 TTCATTACATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834528 85834527 85834599 85834528 85834527 85834599 72 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ..:x...:x:..x...:.x...:...........:...xx..:..x::...:....:..x...:..:.x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 39562366 NA +3104 chr4 + 190214555 125396899 125396898 125396964 66 TACATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063300 46063299 46063365 46063300 46063299 46063365 66 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .....:.:.::.........x.::::...x:..:...:.x......:......:xxx.......:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 79333599 NA +3025 chr4 + 190214555 125396901 125396900 125396975 75 CATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATAAAATATGTA chr4 + 94230402 46063298 46063297 46063372 46063298 46063297 46063372 75 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCA ....:....:.:::.:...:..x.:::..:.x:..:...:.x......:......:xxx.......x..x:..:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 79333603 NA +3265 chr4 + 190214555 125396901 125396900 125396966 66 CATATATGTATGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834537 85834536 85834602 85834537 85834536 85834602 66 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...x.:...x.....:.............xx..:..x::...:....:..x...:..:.x...::. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 39562364 NA +3570 chr4 + 190214555 125428159 125428158 125428240 82 ATGGTGACACATGCCTGTAATCCCAGCTACTTGGAAGGTTGAGCCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...:::..:.--....:.:...........:....:......xx.x...x.:.........:.:..x:xx:..:..:.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 49394961 NA +3108 chr4 + 190214555 125447854 125447853 125447917 64 TATGTATATATCTGTGTATGTATATACACACACATATAAACATACACATATGCACTTTTTTTTC chr4 + 94230402 68837088 68837087 68837151 68837088 68837087 68837151 64 TAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATC ..x.x.::.:.x:....:...:.:........x...:.x..........:::...x.....x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 56610766 NA +3337 chr4 + 190214555 125453572 125453571 125453648 77 GTTGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTAAATTCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....:.x......:.........:.::........x.xx:x...x.....:..::.:.:..x:xx:..:..:.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 49420371 NA +3110 chr4 + 190214555 125464010 125464009 125464117 108 AAATCTTTAAGAGTAGTCAAAGTAAGGTTTTTTGTTTGTTTCACTTTTGTGAATTTTGCTTTATTTTTTATTTTTGTTTTTTACATTAGTTTTTAATTTTGTTTTTTA chr4 + 94230402 69143814 69143813 69143915 69143814 69143813 69143915 102 AAATCATTACCACTAAATGAAGT------CTTCATTTCATTCTTCTCTACAGAGTTGGCTTTTTTTTTTTTTTTTGGTCATTTCCTTAGCTTTTATCTTTGTTTTCTA .....x...xx.x..:x::....------:..::...xx...x::.:.::::.x..x.....x......x......x.:x..x.x....:.....x:........:.. 23M6D79M 68/102 66.7% 102/94230402 0.0% 6/102 5.9% 56320196 NA +3030 chr4 + 190214555 125542666 125542665 125542718 53 TATATGTGCATATATATATATATATATATATACACACACACACACACACAGAG chr4 + 94230402 23247725 23247724 23247777 23247725 23247724 23247777 53 TGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGG .:.:.:....:.:.:..x...:x.:....:........:...........::. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 102294941 87919614 +3081 chr4 + 190214555 125542675 125542674 125542720 46 ATATATATATATATATATATATACACACACACACACACACAGAGGC chr4 + 94230402 85078510 85078509 85078555 85078510 85078509 85078555 46 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGC .......:.x....x.......................xx.:.:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 40464165 NA +3074 chr4 + 190214555 125550240 125550239 125550303 64 ATATATATATATATATATATATATATATATATATATATATACACACACACACACACATATATTT chr4 + 94230402 58675381 58675380 58675444 58675381 58675380 58675444 64 ATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTT ..x.x..:.:..x.x.:...::.........:.:x:....:::.........x..x........ 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 66874859 NA +3024 chr4 + 190214555 125550258 125550257 125550314 57 ATATATATATATATATATATATACACACACACACACACATATATTTCTTATTTCATA chr4 + 94230402 54005688 54005687 54005744 54005688 54005687 54005744 57 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACA .:.:....:...x........:.:.............x.x..x.x..:.:..x..:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 71544570 NA +3022 chr4 + 190214555 125550259 125550258 125550307 49 TATATATATATATATATATATACACACACACACACACATATATTTCTTA chr4 + 94230402 4409082 4409081 4409130 4409082 4409081 4409130 49 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCA .:..:...............:.......x.x.......:..x..:.::. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 121141177 69073378 +3047 chr4 + 190214555 125550261 125550260 125550303 43 TATATATATATATATATATACACACACACACACACATATATTT chr4 + 94230402 4409082 4409081 4409124 4409082 4409081 4409124 43 TGTACATATATATATATATACACACACAGAGACACACACATTT .:..:.......................x.x.....:.:.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 121141179 69073376 +3565 chr4 + 190214555 125559521 125559520 125559642 122 TCCCTCCCTTCCTTCCTTCTTTCTTTTTTCTTCCCCCCCACTCCCTTCCTTCCATCCTTCCTTCCTTCCTTCCTTTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCTCTCCTCCCTC chr4 + 94230402 81341992 81341991 81342102 81341992 81341991 81342102 111 TTCCCACCCTCTTTACTTCTGCATTTCTGCCTATTTACCAATCTCTTCAAGACACCT-----------CTACCTGTCCCCTCCCTTCCTCAATCCCTTCTTTCCTTCCTTATTTTTTCACCC .:..:x..:..:..x.....x:x...:.x.:.x:::x...x..:....xxxx..:.:-----------..x...x.:........:....xx.......:..........x.:.::..x.:. 57M11D54M 73/111 65.8% 111/94230402 0.0% 11/111 9.9% 44217529 NA +3019 chr4 + 190214555 125559579 125559578 125559633 55 TCCTTCCTTCCTTCCTTTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCTC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC .....::..::........:.:....::..:..:.....x:..:::......::. 55M 38/55 69.1% 55/94230402 0.0% 0/55 0.0% 51128898 NA +3055 chr4 + 190214555 125577301 125577300 125577368 68 CAAAACTCCATCTCAAAAAAAAAAAGAAAAAATAAAAGAAAGAAAGTAT---------------TGTTTTAACTTACTTCTAA chr4 + 94230402 47557082 47557081 47557164 47557082 47557081 47557164 83 CAAAGCTTTATTTTTAAACAAAAAAGAAAAAAAAAGAAAAAGAAAGTATGTCCATCTTTATGAGTGTTTTCACATTCCTCTGA ....:..::..:.:x...x.............x..:.:...........---------------......x..x.x.:...:. 49M15I19M 53/68 77.9% 83/94230402 0.0% 15/68 22.1% 78020219 NA +3008 chr4 + 190214555 125587989 125587988 125588029 41 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAATCAAATCA chr4 + 94230402 26392948 26392947 26392988 26392948 26392947 26392988 41 CTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCA ....x.......................:.x...x...... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 99195041 91019514 +3068 chr4 + 190214555 125618488 125618487 125618523 36 AAAAAAAAAAAAAAAAAGCAACAGAATCTATTTTAA chr4 + 94230402 55881172 55881171 55881207 55881172 55881171 55881207 36 AAAAAAAAAAAAAAAAAGCAACGGAATTTATTTTAA ......................:....:........ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 69737316 NA +3621 chr4 + 190214555 125634214 125634213 125634275 62 ATATACACACATATTTATATACATATATATACACACATATATATACACACACATATATATAT chr4 + 94230402 58675381 58675380 58675442 58675381 58675380 58675442 62 ATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATAT ..x.x:......x...:...:.............x.....:.::........x:.x...... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 66958833 NA +3066 chr4 + 190214555 125634220 125634219 125634267 48 ACACATATTTATATACATATATATACACACATATATATACACACACAT chr4 + 94230402 50629533 50629532 50629580 50629533 50629532 50629580 48 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACAT .:.:...::......x....:...........:..x.......x.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 75004687 NA +3051 chr4 + 190214555 125660470 125660469 125660524 55 TTTCTATTTTATTTTTGACTGCTTGTTTTGGTTTTTTTGTTTGTTTGTTTTTGTC chr4 + 94230402 64932080 64932079 64932134 64932080 64932079 64932134 55 TTTGTGTTTGATTTGTGCCTATTTGTTTTTTTTTGTTTGTTTGTTTTTTTTTGTC ...x.:...x....x..x..::.......xx...x...........x........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 60728390 NA +3036 chr4 + 190214555 125660493 125660492 125660536 44 TGTTTTGGTTTTTTTGTTTGTTTGTTTTTGTCTTATTTATTTTT chr4 + 94230402 891012 891011 891055 891012 891011 891055 44 TGTTTGGGTCCTTTTGTCTGTTTGTTTTTCTCCTATTTACTTTT .....x...::......:...........x..:......:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 124769481 65445074 +3859 chr4 + 190214555 125660727 125660726 125660809 83 CATTGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....::..:.--......:...........::........x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 49627530 NA +3163 chr4 + 190214555 125661412 125661411 125661483 72 GCGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:........:..::........x.xx.x...xx:.x.......:.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 49628206 NA +3833 chr4 + 190214555 125667387 125667386 125667469 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGAGGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:............:........x.xx.x...x.x...........:..xxxx:..:..:.. 8M2D73M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 49634190 NA +3613 chr4 + 190214555 125688170 125688169 125688252 83 CATAGTGGCACGCACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x...:..:...........::........x.xx:x...x::.........:.:..x.xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 49654973 NA +3180 chr4 + 190214555 125697636 125697635 125697694 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 49664430 NA +3521 chr4 + 190214555 125698635 125698634 125698703 69 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCATGAGAATCAGTTGGACCTGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::.........:--......:...........x:........x.x..x...x..x...:...::.:. 14M2D53M 52/67 77.6% 67/94230402 0.0% 2/67 3.0% 49665438 NA +3068 chr4 + 190214555 125704722 125704721 125704777 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 124209722 66004833 +3121 chr4 + 190214555 125704724 125704723 125704777 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 35674648 NA +3837 chr4 + 190214555 125704726 125704725 125704813 88 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATGAGACATTTTTATGACTGAGAATAAAGTGATTG chr4 + 94230402 1495000 1494999 1495082 1495000 1494999 1495082 83 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTTTG-----GAGTGGGGTGGTTG ...x.:.........x.:...............:.:..:...:.....x....:::...x:..x:.x..-----..:.:::...:... 69M5D14M 61/83 73.5% 83/94230402 0.0% 5/83 6.0% 124209726 66004829 +3353 chr4 + 190214555 125704728 125704727 125704781 54 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATG chr4 + 94230402 1495000 1494999 1495053 1495000 1494999 1495053 54 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATG ...x.:.........x.:....x..........:.:..:...:.....x..... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 124209728 66004827 +3189 chr4 + 190214555 125704733 125704732 125704787 55 AAAAAAAAAAAAAAAAATATATATATAT------ATATATATATATATATATATGAGACAT chr4 + 94230402 85548420 85548419 85548480 85548420 85548419 85548480 61 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACAT .............:.:x.....:...:.------...:..........x.....x...... 28M6I27M 47/55 85.5% 61/94230402 0.0% 6/55 10.9% 40156313 NA +3029 chr4 + 190214555 125706645 125706644 125706701 57 TCCCTCTCAAAAAAAAAAATAGTTTAAATATATATATGTATATATGTGTATATATAT chr4 + 94230402 34623048 34623047 34623104 34623048 34623047 34623104 57 TTCCTTTAAAAAAAAAAAACAGATTTTCTATATATATTGATATATGTATATACACAT .:...:.x...........:..x..xxx.........xx........:....:.:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 91083597 NA +3718 chr4 + 190214555 125713224 125713223 125713301 78 ACATATATATACACATACACATACATTTATACACACACATGCATATATATGTGTGTATCTATATATGTGTGTGTGATA chr4 + 94230402 22600198 22600197 22600275 22600198 22600197 22600275 78 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATA ...:.:....x.....:..x.:....x:.....x.x.:...:....x.:.........x.::..::::..:x...... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 103113026 87101529 +3388 chr4 + 190214555 125715625 125715624 125715690 66 GTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.............::........x.xx.x...x..........x:.:..x.xx:..:..:.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 49682413 NA +3061 chr4 + 190214555 125719413 125719412 125719510 98 TACTCTATAATATATATATAGCTATATAAC------------------TATATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATATATA chr4 + 94230402 74526007 74526006 74526122 74526007 74526006 74526122 116 TATTATATAGTCTGTATAAACCTAGAGGACACTTTCCTGAAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA ..:.x....:.x.:....x.x...x.x:..------------------..x..xx.x.x....xx.x..x:.:.:..........:x.:.......x........::......:.. 30M18I68M 69/98 70.4% 116/94230402 0.0% 18/98 18.4% 51193406 NA +3142 chr4 + 190214555 125719438 125719437 125719560 123 ATAACTATATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....xx.x..x.::x..:...::::.:.x.x.:::x:.::..x.....::..x..:......x.:.:..:x..:..::.:::..x..::.x:x.:.:.....:.:...:x....::..::.:. 123M 68/123 55.3% 123/94230402 0.0% 0/123 0.0% 104610259 85604296 +3141 chr4 + 190214555 125719446 125719445 125719496 51 ATATATATACACACACATATATATACACACACATATATATACACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x:x:.:..........:.:........x..x..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 79578590 NA +3779 chr4 + 190214555 125719473 125719472 125719547 75 CACACATATATATACACACATATATACACATATATATACACACACACACACACA-----------CACATATATATATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..::::.:...::........x...:x......:..:.....:...........-----------:....:x...x.......... 54M11I21M 58/75 77.3% 86/94230402 0.0% 11/75 14.7% 102471752 87742803 +3778 chr4 + 190214555 125719475 125719474 125719557 83 CACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATA---TATATATATATATATATATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..::.:.:...:......:..x..::x.:....:........:...........x:x.x.x.---..:..:x...x.......... 62M3I21M 61/83 73.5% 86/94230402 0.0% 3/83 3.6% 102471754 87742801 +3389 chr4 + 190214555 125719479 125719478 125719569 91 TATATATACACACATATATACACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 54963193 54963192 54963283 54963193 54963192 54963283 91 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .:.....x..:...x..::....x......:.........xx...:::.:.x:...:.:.:..x....::x.xx.x.x.x.x..:...:.. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 70756286 NA +3288 chr4 + 190214555 125719489 125719488 125719618 130 CACATATATACACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATGTAACTTGGGAGATGGTTTGGATCTGGAGACAGACTGCTTCTCCTCT chr4 + 94230402 22600181 22600180 22600302 22600181 22600180 22600302 122 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGC---ACGTAAGTGATAGTGAAAATCCTGAT-----CTGCTTCTACTTT ....x.x..x..x:x.x.:.:...:.:x....::..x......::...:.x.x....:.....x.:.:.:.:.....::..::---..x.::.x...:..xx::...:x..x-----........x..:. 83M3D26M5D13M 78/122 63.9% 122/94230402 0.0% 8/122 6.6% 103119308 87095247 +3027 chr4 + 190214555 125719490 125719489 125719569 80 ACATATATACACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 54005688 54005687 54005767 54005688 54005687 54005767 80 ACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT ...:....::.:x..........:.............x.x..x.:.x:xxx.::.:.x.x.xx..:....:....x:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 71713802 NA +3160 chr4 + 190214555 125719498 125719497 125719549 52 ACACATATATATACACACACACACACACACACATATATATATATATATATAT chr4 + 94230402 89823929 89823928 89823980 89823929 89823928 89823980 52 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..x:......:x.:..................x....xx........::... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 35895569 NA +3001 chr4 + 190214555 125719500 125719499 125719547 48 ACATATATATACACACACACACACACACACATATATATATATATATAT chr4 + 94230402 89823933 89823932 89823980 89823933 89823932 89823980 48 ATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .:....:x....................x:...xx........::... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 35895567 NA +3203 chr4 + 190214555 125733818 125733817 125733886 69 CATGGTGGCACACACCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGACTCGCTTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::....::...:--......:.........:x.:........x.xx.x..xx.:...........:. 14M2D53M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% 49700621 NA +7380 chr4 + 190214555 125739847 125739846 125740115 269 AGAAGTACAACTTTCTCTT--CCTGTTAGTCTAGCTGCTTAAAAATAACACATTCCAGCAAGGAGGGAGGGAGATTACAAGCAACAGGACATATGAGACTTGCCAAGGGGCCAGCATTTCCTGGCTCACAATTGCAGGAAAGGCTTTGCTCCGTTATCAATGGGACCTGGATGCTTTGATAGGCAATTGTTTTAAAAGCTGAACAACATT-TGCAGTTGAAATA---TTGTGTGTGTGATACAAGTCTTG-TGTGGAGGAAATATAGCACCAGATG chr4 + 94230402 53940908 53940907 53941168 53940908 53940907 53941168 261 AGAGGAGCAACTTTCTTTTTTCTTTTTACTCCAGCTGTTCAAAAATAACACATTCCCAAAACGAAGGAGGGAAATTGCAGGCCCTGGGACATAAAAGATC--------AGTCAGCACTTCCTGGCATACAATGGCAGG-AAGACACTGCTGTAGTTTCTGTGGAACCTGGATGGCCTAATA--CAATACTGTGAAA----GAAATACACTGGGTATTTGTGATAAATCTGTATACAACACATAAGATTTGTTTTAAAGGACAAATAATGCTAGATG ...:.x:.........:..--.:.x...x..:.....:.:................x:x..x..:.......:...:..:..xx::.......x:...::--------:.:.....:........x:.....x.....-...:.x:....x::x.x..x:...:.........x::.:...--....xx.x.x...----...xx...:.-x.:.x...x:...---:...:.:::xx.:.:...x:...-.x.::....x.x...:::.:..... 19M2I79M8D30M1D42M2D13M4D10M1I13M3I23M1I25M 175/254 68.9% 261/94230402 0.0% 22/254 8.7% 71798939 NA +9030 chr4 + 190214555 125741157 125741156 125741645 489 TGAGGGTAGTTTAAAGAACCTTATTTCCAGGGAGAAACATACTATCTGACATACAAAAGAAGAAAAAATATTTTATAATCAAGTCGAAGAAGTTAAAATTAAAAAGAGAATCAAGCAAAGT---ATTTAAAAAAT-----------------------------TGACAATATTTATAAAATAGAATTAGATTCAGACTTAATATTTACTTTTATTTTAATACTGACTCCTGATGGAACT-TAAAAACAGCTGGCTTTGTTGATCTAATGGTTCCATGTAAGGCTACATAGGCACAGTCAGAATCAT-TAAAGTTCCATTCTCATCAGATTTATGCTTGAGAAAACAGTATTCTCTTATAGTAATTTATTGTAGACACTTCTTTGTTTGGCTTAGATATATTACTAAAATGACAGAAAAGGATGAAATGAAATAGTACAGCAATTACACAGTTTAAAACTT------------------TTCATTAATAGAGAAGGATTGAACTGCAT-------CTTTCATTACCACCATCTGTGTTGTATATAGCA chr4 + 94230402 53942508 53942507 53943029 53942508 53942507 53943029 522 TGAAGCCTATTAGAAACATCCAATCTTAATGGAAAAAATTGCACTATGATAAACAAAACACTTGTGAGTACCTTAAAAACAAAT-GACAAATGCAAGATTGTAAGGATCAACAATAAAAATCAAATGAAAAAAACCCACCCAAAACTAACGTCCCCTAAATTAATGACAATATTTATAGAATAGATCTAAGCATAGACCTAATATTTAGCTTTATTTAAATTTTGGCTCCCAAGAGAATTAAAAAAACAGCTGGTGTTGTTGATCTAATAGCGCCATGTCGGCTTGAGCAGACAGTGTAAGAACTGTGTGAGGTTCAATGTCAACAAGCTATATACTAGGAAAGATTGAGTT------TACTATTTTATTTTA---------------TGTTTAAATTCTGTGTTGTGATG--AGAGTGGAATTAGATGAAATTCTAGAGCAAATATACAGTTTGAAGCTTAAACCCAAATTCGTTTAGTCCATTTAAGCAAAAGGA--GAAATATATATCACCCCACTCCTTACCACCAGCTGAACTGTATATTACA ...:.x:x:..x:..:x.:.:x..:.:x.x...:...xx.:.xx.x...:.x......x.xxx:x:.:..::...x..x...:.-..x:..xx:..:...:x..:..xx.x...xx...:.---..xx......:-----------------------------..............:......x:..:::x:....:.........x:.......x...x:..:....::.x:...:.-x............:x.............:.:x......x:.x:.:x::..:..xx..x....:::.-.:.:....x..x::x.:x..x.x...:..x.::..:.:x.x:..------..x..x......x..---------------x.:...:..x:xx.::.:x:...--...:x:.:..x.:.......xx..x.....x..:.......:..:...------------------.:....x.x:x.:.....--...x.::..-------.x:..x.........x...x::.......x:.. 84M1D36M3I11M29I76M1I66M1I44M6D15M15D23M2D48M18I18M2D9M7I33M 300/463 64.8% 522/94230402 0.0% 85/463 18.4% 71798649 NA +3117 chr4 + 190214555 125742463 125742462 125742545 83 CATGGTGGCATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATGGCTTGAACCTAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x....:.:...........::........x:xx.x.:.xx:........:.....x:xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 49709266 NA +4515 chr4 + 190214555 125749459 125749458 125749756 298 TTTCTTCCTTTCTTTCTCTCTTTCTTTCTTGCCTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTCT--------------TTCTTTCTTTTTCTTTCCTT-TCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTC----TTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTTTCTTTCTTTTCTTTCTTTTCT---TTCCTTCC-TTCATTTTTGTCACTCAGCATTGATTTCCTCTTCATAACAATTC chr4 + 94230402 44930784 44930783 44931103 44930784 44930783 44931103 320 TCTCTTCCTG-CTGCCACACTGCATCTTTTACTTACATTTTTTCCCTTTCAGATGGCTTTCTTTTTTTTCCTCCACCTTTCCTATCTTTCCTCTTTCCTGTAAATAACACATATCTTCTGACTCATTTGTGCCTTATCTGCCTGCAGTTTTCATCCCAAAGTTGTCATCGTTTCAAAATTATATTATTTATCTCTACTTCCCCTGGTGTCCTTCCATTCTTACTCCATGTTTTTCTGTTCTGTTCCTTTCAGTCCCTAATGTTCTGCATGCCAGCTGTTTATTCTTGTCTCAAAATTTTCCTGTCTTATTAGTAATTATTC .:.......x-..x:.x.x..x:x.:.:..:.:.x.x..:....::.:.:xxx.xx........:...:.:...x:.......x:...:.:......:.x.--------------....xx..:x..:x.x....-...x::.x.xx...:.x...:xxxx..x.:x.:x....----..x:x..x:..x.:...x...:.::.xx.x..:....x.....x...:x.x:....:.x:.:.x..:.....xx.:.:.xx.x....---.x..xx.:-..:...:.....x.xx.::x..xx.x..:.x..x:...:x.... 10M1D90M14I20M1I38M4I87M3I8M1I44M 181/297 60.9% 320/94230402 0.0% 24/297 8.1% 80818675 NA +3685 chr4 + 190214555 125749495 125749494 125749620 126 TTTCTTTCTTTCTTTTCTTTCTT-TCTTTCTTTCCTTCCTTCTTT-CCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTT chr4 + 94230402 69568146 69568145 69568273 69568146 69568145 69568273 128 TTTGTTTGCCTCTTATCATCCTAATGTCTGTTCCGTTACTACAGTACTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ...x...x::....x..x.:..x-.x.:.x..:.x..x..x.xx.-.:......x..x..:xx..x....:.:....x...:....:.x...:..:.::.:x....xx..:...:.....:...:... 23M1I21M1I82M 84/126 66.7% 128/94230402 0.0% 2/126 1.6% 56181349 NA +3261 chr4 + 190214555 125749511 125749510 125749627 117 CTTTCTTTCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTT-------CTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCT chr4 + 94230402 84818207 84818206 84818330 84818207 84818206 84818330 124 CTTACTCTCCTTTTGTCCTTCCTCTTCTATTCTGTTCCCTCTTCCTTGTGGGTTTTTTTTTTTTTTCCAGCTCCTTTAAAAAGGCTTGCAAATTAATTACCTTGTATTTCTTGCCTGTTTTTCT ...x..:..:..:.x........::.:.x:.::x....:....:...x.xxx...:.....:...:.:xx...:...-------...x:xxx..xx..x.:..x.x......x.:.x:...:.. 77M7I40M 75/117 64.1% 124/94230402 0.0% 7/117 6.0% 40931304 NA +3717 chr4 + 190214555 125749536 125749535 125749701 166 TTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTTTCTTTCTTTTCTTTCTTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTC------CTTTCTTCCTTTATCCGCCCACTTTTGCATTG---TTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTC--------TTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...:..x:..:x..x..:..------.......::.:.x...x::.x.....x:x..x---.:...:..x.::...x:x...x..:..x:........--------......:xxxx..:x:..::.:x.......x.:.....::.........::..:x.::.. 20M6D32M3D37M8D60M 96/149 64.4% 149/94230402 0.0% 17/149 11.4% 75573270 NA +3055 chr4 + 190214555 125749594 125749593 125749683 90 CCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTT chr4 + 94230402 73066126 73066125 73066215 73066126 73066125 73066215 90 CCTCCTGTCCTCTGTCCTTGTTGTTCCCCTTGTTTCTTACTCCTTCTGTTCCATTTTCCCCTTTCTGTCTGGTGTGTTTTATCTTTTTTT ...:.:x....:.x.::..x..x:.::.:..x:.....x..:...::x..:.x..:.::.......x...xx.x.x....x..:...:.. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 52683468 NA +3162 chr4 + 190214555 125749633 125749632 125749702 70 CTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTT--TCTTTCTTTTCTTTCTTTT chr4 + 94230402 28615945 28615944 28616016 28615945 28615944 28616016 72 CTTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT .........:......:.:......x:...x...x..x..:.x:x...::.--...:..::..:..:..... 51M2I19M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% 97133688 93080867 +3039 chr4 + 190214555 125782880 125782879 125782958 79 CGATCAATTGAGGTAGTTATGTGAAACAAAACAAAAAAAAAAAAGAAAAGAAGAAAACTTATTTAAAATAAAAACTTAT chr4 + 94230402 82080830 82080829 82080908 82080830 82080829 82080908 79 CAAGCAGTTGAAACAGTAATATGAAAAAAAAAAAAAAAAAAGAGGATATTATGGACACAAATTTAAAGCAGTAGCTCAT .:.x..:....:::...x..:.....x....x.........:.:..x.xx.x.:.x..xx.......::.:x.:..:.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 43702050 NA +3003 chr4 + 190214555 125786928 125786927 125786991 64 CTTCATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTTATTTCTGTCTA chr4 + 94230402 6473255 6473254 6473318 6473255 6473254 6473318 64 CTCAGTTTAAAAGAAAAAAAAAAAAAACCTAAAAAATAGTATAAAACATTGCCATTTTGGTCTA ..:x:.:.....:..............xxx......x.:x.x....x....::....:x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 119313673 70900882 +3698 chr4 + 190214555 125791510 125791509 125791629 120 AACAGAGTGAAACTCTGTCTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAAAGGCAGACAGAAAATATTGAAAACCCTATTGAGGTATTTTT chr4 + 94230402 38128952 38128951 38129060 38128952 38128951 38129060 109 AACACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGC------AAAATAT-----ACCCTATGGAACTAATTTT ....x.:.:.:.::x...:..:...xx.:....::x..x.....x.:...:......x...:.....::.:.x.:::..x...------.......-----.......x..:x..x.... 83M6D7M5D19M 76/109 69.7% 109/94230402 0.0% 11/109 10.1% 87662558 NA +3110 chr4 + 190214555 125791535 125791534 125791601 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAAAGGCAGACAGAAA chr4 + 94230402 77634766 77634765 77634832 77634766 77634765 77634832 67 AAGAAAAGTAATTTAAAAAATGCAAAAAAAAAAAAAAGAAAACAAGCAAACAAAAGTCATACAGAAA ..:....:x..xxx......x:x..............:....x:..x..:x.....x..x....... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 48156769 NA +3418 chr4 + 190214555 125809928 125809927 125809980 53 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATACTT-AAATATTATC chr4 + 94230402 63630126 63630125 63630179 63630126 63630125 63630179 54 CAGCTCTAGAAAGGAAAAAAAAAAAAAAAAAGAGGAAATACTTAAAATATTATC ..x...x.:...::.................:.:.........-.......... 43M1I10M 46/53 86.8% 54/94230402 0.0% 1/53 1.9% 62179802 NA +3067 chr4 + 190214555 125815691 125815690 125815749 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 49782485 NA +3029 chr4 + 190214555 125822242 125822241 125822309 68 ATAATGCTGTTTTTTTGGTTTGTTATTGTTGTTGTTGTTGTTGTTTTTTGGTTTTGT-----TTTGTTTCGTT chr4 + 94230402 90753773 90753772 90753845 90753773 90753772 90753845 73 ATGGTGCTGTTTTATTTGTGAGTTTTTGTTGTTGCTGTTGTTTTTGCTCGTTTTTGTGTGTATGTATTTCATT ..::.........x..x..xx...x.........:.......x..x:.:.x......-----.x.:....:.. 57M5I11M 52/68 76.5% 73/94230402 0.0% 5/68 7.4% 35068469 NA +3189 chr4 + 190214555 125822254 125822253 125822301 48 TTTTGGTTTGTTATTGTTGTTGTTGTTGTTGTTTTTTGGTTTTGTTTT chr4 + 94230402 44382697 44382696 44382744 44382697 44382696 44382744 48 TTTTAGGTGGTGGTGGTTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTT ....:.x.x..x:.x.......................x......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 81439557 NA +3024 chr4 + 190214555 125891185 125891184 125891232 48 CCAGTTTCATGGCTATCACTTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 + 94230402 15438533 15438532 15438580 15438533 15438532 15438580 48 CTAGTTTTGTGATTTTCATTTCTCTCTCTCTCTTTTTTTTTTTCCTTT .:.....::..::.x...:..............:.:.......::... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 110452652 79761903 +3097 chr4 + 190214555 125895864 125895863 125895936 73 TGCTCCTGTAGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:.........:.::.:......x.xx.x...x::........::.:..x:xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 49862659 NA +4218 chr4 + 190214555 125898785 125898784 125898939 155 TTTTCTGTCTCTCTCTCTTTCTCTCTCCCTTCTCTTCTCCTTCCTTCCTTCC--TGTCCTTTCCTTTCCTT----TCCTTCTTTCCTTCTTTCCTTCCTCCCTCCCTCCCCCCGCCTCCCTCTCTTCCTCTCTCTCTCTTCCTTTCTCCCTTCTTCTTTCT chr4 + 94230402 50176266 50176265 50176413 50176266 50176265 50176413 148 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTT----TATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACC------CACCTCCCCATTTTCTTGTCTC---CTTCTTTTCTTTCTCCTCCATTCT ...........x..x:::.:..:...:....----.x...x:..x:::..x.--...:.....:x...:..----..x..:..x:........:...:..xxxx..------.:......:x.:...:.x....---....:.....::..:..:.x.... 31M4D17M2I17M4I31M6D22M3D24M 100/142 70.4% 148/94230402 0.0% 19/142 13.4% 75722519 NA +3327 chr4 + 190214555 125898903 125898902 125898983 81 TTCCTCTCTCTCTCTTCCTTTCTCCCTTCTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCCTTCTCTTTCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ...:.:.:.x.:.x:..x....x:.:x.x..:.:.:.:x:..x.:.x..:...............:......xx....... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 101922402 88292153 +3387 chr4 + 190214555 125916452 125916451 125916516 65 TTTTTTTTTTTTTGGCTTTTCTTCTTTTTCCTTCCCTCCCTCCCCCTTTCTCTTCCTTCCTTCTT chr4 + 94230402 34366985 34366984 34367049 34366985 34366984 34367049 65 TTTTTTGTGTTTTCATTTTTGTTCTTTCTCCTTCCCTCCCCCCCCTCCCCCCCCTTTTTTTTCTT ......x.x....x::....x......:............:....::::.:.::::..::..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 91549467 NA +3418 chr4 + 190214555 125916473 125916472 125916550 78 TTCTTTTTCCTTCCCTCCCTCCCCCTTTCTCTTCCTTCCTTCTTTCCTTCCTTTCTTCTTTCCATGCTTCCTTCCTTC chr4 + 94230402 46413388 46413387 46413465 46413388 46413387 46413465 78 TTTTTTTTTCTCCCCCCCCCCCCCCCCACTATTCCCCCCACCACCCTTTTCCTTCTCTGTCCCATGCTGCCCCCTCTC ..:.....:..:...:...:.....::x..x....::..x:.x::.:..:.:....::x.:.......x..::.::.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 79503085 NA +3035 chr4 + 190214555 125921726 125921725 125921788 63 CACACACACACACATGTATACACACATACATGTATATATGTGTATATGTCCACTGTATAAGGT chr4 + 94230402 74526077 74526076 74526139 74526077 74526076 74526139 63 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGT ................x.:.:.....x.:..:..::...:.:.:...x.xx.:..:x.x.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 51395649 NA +3096 chr4 + 190214555 125923845 125923844 125923923 79 ATGTGTGTATGTGTGTGTGTGTATATGTACACACACACAAAAGCATATATACATGTATACATATATACATACATACATG chr4 + 94230402 85834538 85834537 85834616 85834538 85834537 85834616 79 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ..x.....x.............:.:.:.xx.:::.x:..x.x::..:..x.:.::.:.x:..::.:.......:..... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 40089307 NA +3354 chr4 + 190214555 125923846 125923845 125923918 73 TGTGTGTATGTGTGTGTGTGTATATGTACACACACACAAAAGCATATATACATGTATACATATATACATACAT chr4 + 94230402 85834543 85834542 85834615 85834543 85834542 85834615 73 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x...:...............xx:.::.x:..:...x.x.:.x...:.::.x...:..:.:.....:.... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 40089303 NA +3705 chr4 + 190214555 125923975 125923974 125924098 124 GTGTATATGTGCATATAGACATGTATAGACATATGTATATGTATCTATACATGCATACACATATACATATATGCAGGTGTACATATATGCACATATATGTATACATACACACATTCATACACAT chr4 + 94230402 5214204 5214203 5214321 5214204 5214203 5214321 118 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCT------GCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...:.x:.....x:..:.:..:.:..xx:::.:..:::.x..:...------...:......x...:.:......xx..:.::.:.:...:..x.::...:.::::.::..x..x::.:..... 46M6D72M 71/118 60.2% 118/94230402 0.0% 6/118 5.1% 120709771 69504784 +3475 chr4 + 190214555 125953410 125953409 125953498 89 ATGAATGCTCAGGTATATATATATGTATATATATGTGTGTGTGTATATATATGTATATATATGTGTATATATATATGAGAAAGTAGAAA chr4 + 94230402 41749091 41749090 41749179 41749091 41749090 41749179 89 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTAAAGAAGAAGAGA ....x.::x:.:::.:.:.....x..x.....xx..:....:....:....::..:..:..:.:x.....x:..:.:.::...x...:. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 84204319 NA +3142 chr4 + 190214555 125978307 125978306 125978380 74 GTGCACCTGTGGTCCCAGCTACATGAGAGGCTGAGGC--AGGAAGCTCTTCTGAGCCTAGGAGATGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACT--TGAACCCAGAAGCTTTGGGCTGTAG ......x...:..:........x...:........x.--:x.....x..--...:..:..:..x.xx:.....:.. 37M2I10M2D25M 55/72 76.4% 74/94230402 0.0% 4/72 5.6% 49945103 NA +3792 chr4 + 190214555 126076395 126076394 126076463 69 CAGTGGTGTGCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGTAGGAGAATTGCTTGAACCCGGAGGC chr4 + 94230402 76033199 76033198 76033265 76033199 76033198 76033265 67 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ........--...x......:...........:.........x:xx.x...x::.........:..:.. 8M2D59M 54/67 80.6% 67/94230402 0.0% 2/67 3.0% 50043196 NA +3700 chr4 + 190214555 126083252 126083251 126083334 83 CATGGTGGTGTTTGCTTACAATTCCAGCTACTTGGGAGGCTGAGTCAGGAGGATCACTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:--:.x.::.:.............::........:.xx.x.:.x................x:xx:..:..:.. 11M2D70M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 50050055 NA +3265 chr4 + 190214555 126084175 126084174 126084241 67 TGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCTCTTGAACGCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x.x.......x...:..x.xx:..:..:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 50050964 NA +3383 chr4 + 190214555 126100839 126100838 126100962 124 TATATATACGTATATACGTGTATACGTATATATATACGTATATATACGTATATATGTGTATACGTATATATATACGTGTATATATGTGTATACGTATATATACGTATATATATACGTGTATACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACT--------------CGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:..::..:.x.x:...x:::::.x.....:...x:.:......x--------------...:..:x.......:.:..:x::..:x.x:..:.....::....:x....:.:..:.:... 48M14D62M 69/110 62.7% 110/94230402 0.0% 14/110 12.7% 104991645 85222910 +3310 chr4 + 190214555 126100881 126100880 126100952 72 TATACGTAT-ATATGTGTATACGTATATATATACGTGTATATATGTGTATACGTATATATACGTATATATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .....:...-:.:....x....:..:.:......::xx......x...::.:.......:.x....:..:.:. 9M1I63M 52/72 72.2% 73/94230402 0.0% 1/72 1.4% 69233590 NA +3760 chr4 + 190214555 126100909 126100908 126101039 131 TATACGTGTATATATGTGTATACGTATATATACGTAT--ATATATACGTGTATACGTATATATATACGTATATATACGTATATATACGTGTATACGTATATATACGTATATATATGTATATATACGTGTATAC chr4 + 94230402 21109194 21109193 21109310 21109194 21109193 21109310 117 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGT----------------GTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTAC .....:...:.:.x.x...:x:.....x....:...:--.:......x:..----------------...:x.........:..:x.:..:x.x:..:.....::....:x.....:..::.:...x.xx... 37M2I12M16D66M 79/115 68.7% 117/94230402 0.0% 18/115 15.7% 104991715 85222840 +3694 chr4 + 190214555 126100947 126100946 126101060 114 TATATACGTGTATACGTATATATATACGTATATATACGTATATATACGTGTATACGTATATATACGTATATATATGTATATATACGTGTATACGTATATATACGTATATGTAAT chr4 + 94230402 21109194 21109193 21109307 21109194 21109193 21109307 114 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGAT ....:.:....:.x:x.:.:x:::..:x.....:...x:.:......x:..:...x....::..:...:x:..::x.x.:.:..::...:..:.x....::.:.:.:.:.x:.. 114M 67/114 58.8% 114/94230402 0.0% 0/114 0.0% 104991753 85222802 +3531 chr4 + 190214555 126101139 126101138 126101257 119 ATACGTATATACACGTATATATACGTATATACGTACATATACGTATATATACGTACATATAC----GTATATATACGTGTATATACGTACATATACGTATATATACGTGTATATACGTATATA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.x.x..x::.x....:..::..:.x.x:..:x:::..:x.....:...x:........----...:x.......:.:..:x.:.:.x.x.::......:.:::..x....:.:.::.:. 62M4I57M 73/119 61.3% 123/94230402 0.0% 4/119 3.4% 104991960 85222595 +4051 chr4 + 190214555 126101254 126101253 126101361 108 TATATACGTGTATATATGTGTATATACGTATATATACACATATATACGTGTATATACGTATATATGTATACATATGTATGTATCTATACATATACACATGTATGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:.:....:.x.x....x:::..:x.....:...x..:......x:..:..:x::..::......:x...::x.x...:.x...:::...:x.:...:...:.:. 108M 68/108 63.0% 108/94230402 0.0% 0/108 0.0% 104992060 85222495 +3616 chr4 + 190214555 126106023 126106022 126106096 74 CATGGGAAAAAATATCTAACATTCAGAACTGCCAAAAAGAGAAAGAAGATAATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 851718 851717 851791 851718 851717 851791 74 CAGGGCAAAAAATGCCTGTCAATAAAAAGGGGAAGAAAGAGAAAAAAGGGAGTTTTTTTTTTCTTTTTTTTTTT ..x..x.......::..:x..x.x.:..xx.xx.:.........:...:x.:..........:........... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 125254305 64960250 +3789 chr4 + 190214555 126121703 126121702 126121774 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.x..x...x::...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 50088497 NA +3005 chr4 + 190214555 126122797 126122796 126122860 64 TTTTAAAATACCTTCATTGTTTGGCTAGGTCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 + 94230402 90399390 90399389 90399453 90399390 90399389 90399453 64 TTTTTAAACACCTTACTTTCTTGGCTGGCTGGTTGCTTTTCTTTTTTTCTTCTTCTTTTCTTTT ....x...:.....xx..x:......:.x.xx:.x::.......:......:..:....:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 35723407 NA +3259 chr4 + 190214555 126154594 126154593 126154648 55 GTGTGTGTGTCTGTGTGTATACACACAGACACACACACACAGACACACACATTCA chr4 + 94230402 68837095 68837094 68837149 68837095 68837094 68837149 55 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA .....:....x........:.....x.x...:...:.....x:......:x..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 57317499 NA +3377 chr4 + 190214555 126154596 126154595 126154646 51 GTGTGTGTCTGTGTGTATACACACAGACACACACACACAGACACACACATT chr4 + 94230402 68837095 68837094 68837145 68837095 68837094 68837145 51 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATT .....:..x.......:........:.:...:...:...x.::........ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 57317501 NA +3094 chr4 + 190214555 126169676 126169675 126169745 70 ATTTATATATACAACATTTGTATATATATATATATATATATATATATAAAACGCTTATATGGATGAAACA chr4 + 94230402 22108408 22108407 22108477 22108408 22108407 22108477 70 ATCCAGATACACTAGTTCCATATTTATATATATGTATATACACACATAAAACATTCATTTGAATAAACCA ..::.x...:..x.xx.:::...x.........:......:.:.:.......::.:..x..:..:..x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 104061268 86153287 +3031 chr4 + 190214555 126180498 126180497 126180563 66 ATTGTTTCCAAAAAAAAAAAAAATCCAATATTTGTTTATGAAAGGAAAGAAAAAATATAAAAACTG chr4 + 94230402 56997910 56997909 56997975 56997910 56997909 56997975 66 ATTATTTCTAAGGAAAAAAGGAAAACAATACTGATTTATCAAAGGAAAATGAAAGACTTAAAACTG ...:....:..::......::..xx.....:.x:.....x........:x:...:xx.x....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 69182588 NA +3022 chr4 + 190214555 126205757 126205756 126205805 49 TGCTGCACAGAAGCTCTTTAGTTTAATTAGATCTCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG ...........:....:......:.:x.xx.x.::.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 73425295 NA +3447 chr4 + 190214555 126215497 126215496 126215579 83 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--....:.:.........x.::........x.xx.x...x.x........:.....x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 50182300 NA +3070 chr4 + 190214555 126215630 126215629 126215695 66 TCCGTCTCAGAAAAAAAAAAAAAAAGAGAGAGAGAGAGATACAGACAAAAACTATAGAGACATTTC chr4 + 94230402 44112707 44112706 44112772 44112707 44112706 44112772 66 TCTGCTGCCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTTC ..:.::x.x:...............:.............xxx.x...x.:x..xx::......... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 82102923 NA +3152 chr4 + 190214555 126215640 126215639 126215682 43 AAAAAAAAAAAAAAAGAGAGAGAGAGAGATACAGACAAAAACT chr4 + 94230402 64241143 64241142 64241185 64241143 64241142 64241185 43 AAAAAAAAAAAAAAAGGGAGAGAGAAAAATTCAGATAAAAATT ................:........:.:..x....:.....:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 61974497 NA +3083 chr4 + 190214555 126235465 126235464 126235532 68 TTATTTT-------GTTTTGGTTTTGTTTTGTTTCTGTGAATCCTTTATGTAGTTTCATTGACTTCTTGCTTTAA chr4 + 94230402 10054790 10054789 10054864 10054790 10054789 10054864 75 TTATTTTCACATAAGTTTTTGTTTTGTTTTGTTTCTGAGAATTCTAACTTTATTTTGATTATCTTTTTACTGTAA .......-------.....x.................x....:..xxx.x..x...x...:x...:..:..x... 7M7I61M 54/68 79.4% 75/94230402 0.0% 7/68 10.3% 116180675 74033880 +3021 chr4 + 190214555 126250972 126250971 126251041 70 ATCCCTCATAGCTTTATATATTTTATTTATTTATTTATTTTTTATTTTTTACTTTT---TTTTATTTTTATTT chr4 + 94230402 73610062 73610061 73610134 73610062 73610061 73610134 73 ATCTTTTGGAGGTTTTTTGATTTTTTTTATCTGTTTATTTTTTATTTTTTACCTTTAGAACTTAATATTATTT ...::.::x..x...x.xx.....x.....:.:...................:...---x:...x.x...... 56M3I14M 53/70 75.7% 73/94230402 0.0% 3/70 4.3% 52640910 NA +3096 chr4 + 190214555 126270854 126270853 126270923 70 CGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACTCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:....:.--...x......:.........:.:.........x.xx.x...xx:.x.....:.:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 50237657 NA +3133 chr4 + 190214555 126344546 126344545 126344600 55 AAAAAGAGAGGGAAGGAGGGGAGGGGAGGAGAAAGGAGGGGAGGGGAGGGGAAAG chr4 + 94230402 26216020 26216019 26216074 26216020 26216019 26216074 55 AGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG .:.....:.::...:.x..........::.::....x...........::.:x.. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 100128526 90086029 +3105 chr4 + 190214555 126349720 126349719 126349767 48 CTCTTTCTCAAACAAACAAACAAACAAACAAAAAATAAAAAATAAAAA chr4 + 94230402 72889590 72889589 72889637 72889590 72889589 72889637 48 CTCTTACCAAAACAAACAAACAAGAAAACAAATAATAGAGAATAAAAA .....x.:x..............:x.......x....:.:........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 53460130 NA +3540 chr4 + 190214555 126386794 126386793 126386891 98 CATGGTGGTGCACACTTGTGGTCCCAGCTACTTGGGAGGCTGAGATGGGAGGATTGCTTGAGCCCAGGAAGTGGAGGTTGCAGTAAGCCGTGATGGCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGATGCCA ..::.........:--...:..:...........::........x:xx.x.:.x::.....:.....:.:x.xx:..:..:..x.---.:.....x.. 14M2D69M3D10M 65/93 69.9% 93/94230402 0.0% 5/93 5.4% 50353597 NA +3043 chr4 + 190214555 126422220 126422219 126422298 79 TAAAATTAACCTATTGAGAAATAATTTCATACTTTTTAGAAAACAAATATAGCAATGAATAGCACAAGTTTTCTCAACA chr4 + 94230402 6905282 6905281 6905354 6905282 6905281 6905354 73 TGAAATTATCCTGTTATAAAGTAATTTCATACTGTATAGAAAAAGAATATAATA------AGCACTTGATTCTTCACCA .:......x...:..:x:..:............x.x.......x:......::.------.....xx.x..::...x.. 54M6D19M 54/73 74.0% 73/94230402 0.0% 6/73 8.2% 119516938 70697617 +3024 chr4 + 190214555 126434190 126434189 126434247 58 CTATTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578262 26578261 26578319 26578262 26578261 26578319 58 CTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...x.:x..................:.:.:.:.:.:xx.:...:...x...::..... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 99855928 90358627 +3212 chr4 + 190214555 126434198 126434197 126434251 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.:.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99855932 90358623 +3235 chr4 + 190214555 126434198 126434197 126434249 52 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578268 26578267 26578319 26578268 26578267 26578319 52 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...................:.:.:.:.:.:x..:...:...x...::..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 99855930 90358625 +3129 chr4 + 190214555 126434200 126434199 126434253 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.:.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99855934 90358621 +3046 chr4 + 190214555 126434202 126434201 126434255 54 TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .:...................:.:.:.x.x.xx..:...:...x...::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99855936 90358619 +3122 chr4 + 190214555 126434679 126434678 126434732 54 AGTGCAAGACTC---CGTCTCAAAAAAAAAAAAAAAAGTGTAAAAATTAAATATTAT chr4 + 94230402 57340688 57340687 57340744 57340688 57340687 57340744 57 AATATAATACTCAGATGTCTTAAAAAAAAAAAAAAAAGTGTAAAAAACAAATCTTAT .:.::..x....---:....:.........................x:....x.... 12M3I42M 45/54 83.3% 57/94230402 0.0% 3/54 5.6% 69093991 NA +3399 chr4 + 190214555 126441631 126441630 126441700 70 TTATTTATGAGTTTTCTTTTTTTTTTTTTCTGCATGGTTAGATCATCTTTGTATATTATGTGGCACCACT chr4 + 94230402 60444008 60444007 60444077 60444008 60444007 60444077 70 TTATTCACAATTCTTTTTTTTTTTTTTTTTTCCATGGTAGGATCACATTTGTGCTCTGTGTGCTACCTCT .....:.::.x.:..:.............:.x......x:.....:x.....::x:.:....x:...x.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 65997623 NA +9477 chr4 + 190214555 126458927 126458926 126459337 411 ATAGAAATGTGGTCATTCCTGGTAGTGGACCTGACGTTATCAGATGAG--TTTTCCTCTCCAGATGCCATGGTTTTATGTACTGTAAATGATCTTCTCATTA-CCAGATGGTATGAGAAAGAAACTGCTTCAGGGAGGTAGATGCTATAGAAGTCTGTACATTGAGTAGCAATAAAAAAAAGCAAATCTTTGTAAACTAGCCAGCAAAGCATCTTAACACAGCAGTGAGTATTGGGGAATGCAAACAGTGAACTCGC--------CATCTGACCAGATGTGGACAT-TCCTAATGGATGATAAGTTTAATTAACCAATAAAATGTTTTCAATTTAAAGCTTAAAGTGGTGATTATAATGTTTGTGTTCTTTGCCTAGACAGTACAGCTGAAGCAGAGATACCAAAAAAGCAAATTAGTTTGCA chr4 + 94230402 53666625 53666624 53667031 53666625 53666624 53667031 407 ATTAAAAGCTAGCTAGTCCTTCTTGTATGCGTGATCTTATCATACTGGCCTTTTTCTTTCCAGATGTCACAGGTTTATGTGGTGTAAATGATACAGTCATTACCCAGGTGGTATAAGACGGGAACAGCTTCTGGGAGGTACACGTTATTTAATTCTGCACATCCAAGGTCTATAAAAAAAG------------AAACTGGTCAGTAAAGTGTCTGAATTTTGCACTATCCATTTGGGAATAGAAGCTCTGAACTGACTGACTGCACACTTGACCAGATGTGGCCTCATCTTTATAGAAAACAA--CCAGACCACCAATAAAAT-TATTCAAAATACGACTCTGAATGGCAATCACAGGACTGCTATTCTCATCATAACAAGCTCAACTG-TGCACAAACAGTAAGGATCAGATTTAGTTCTCA ..x:...xx.:.::.x....xx.x..:x:.x...:x......x.:x:.--....:..:........:..::.x.......:x..........x:xx......-....:......:...x:.:...x.....x........x.:.:...xx..x....:....:x.:x:x.x.........:------------.....:.:...:....::...x..:x:x...x.:xx:...x......:x..:.xx......x:.--------..::.............x.x:-..:.x..:..x:.:..--::.:x:x...........-.x.....xx..x::..:x:.:...::..:.:.:x::.xx.:....:xx.x..:xx..:x..:...-x...x.:.:.x:..::.xxx:.x......:x.. 48M2I52M1I78M12D64M8I21M1I16M2D18M1D65M1D33M 254/395 64.3% 407/94230402 0.0% 28/395 7.1% 72792302 NA +3136 chr4 + 190214555 126469660 126469659 126469725 66 TTTTTGTTG---------TTGTTTTTTTTTTTTTTTTTTTTTTGAGACAGTCTCACTCTGTCACCCAGGCTGCAG chr4 + 94230402 8115032 8115031 8115101 8115032 8115031 8115101 70 TTTTTGTTGGGTTGTGGGTTGTTTTTTTTTTTTGTTTTTTTTTGAGGTAGCCTCA-----TTACCTAAGTTATAG .........---------...............x............::..:....-----.:...:.:.:.::.. 9M9I37M5D15M 51/61 83.6% 70/94230402 0.0% 14/61 23.0% 118354628 71859927 +4090 chr4 + 190214555 126493749 126493748 126493908 160 AAAACACTAACACTAACGATAGCTGAAGAGCTTAAAAAAAATTT-----CAAGAAAAAATCTCATAATGTTTT----AAGAAAGTTTACGAATTTGTGTTGGGCAGCATTCGAAACTGTACTGGGCCGCATGTGGCCTGTGAGCCATGGGTTGGACAAGCCTGCCATAG chr4 + 94230402 45575592 45575591 45575751 45575592 45575591 45575751 160 aaaacattaa-------gagaaaaagagagatgaacaaaaacataaaaccagtaggatatgtgaccttgtttttgtgaaaataacacaccaatttaggttG--CCAAATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGCAGTAG ......:...-------..x.:xx::....x.x..x.....:x.-----..:x.::.x..x.x.:xx......----..:.x.::x:..x.....:x....--.x:x...xx..:....:.......x.......:.....:::...........:.x......x:... 10M7D27M5I24M4I24M2D66M 104/151 68.9% 160/94230402 0.0% 18/151 11.9% 80918157 NA +3023 chr4 + 190214555 126506090 126506089 126506133 44 TTAATATTAAATTTTATATTATATACATTATATACATATGTATA chr4 + 94230402 64358337 64358336 64358380 64358337 64358336 64358380 44 TTGATATTTGAATTTATATTTTATACATTATATACACATGTATA ..:.....x:.x........x...............:....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 62147753 NA +4076 chr4 + 190214555 126528717 126528716 126528846 130 ATCTCTCTCTCTATATATATATATGTATGTATACATATGTATACACACACACACACAACTATATATATGTGTGT-GTTTGTGAGTGTGTATTTATACAGTTGACCCATAAACAACATAAATTTGAACTGTG chr4 + 94230402 60831527 60831526 60831645 60831527 60831526 60831645 119 aTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATA----TTTCTCATA--------AGATCTGAACTATG ..x...x.....:.x.x.x.x.x.x.:......:..:.............:.....xx...x...:..x.:.:.-..:....x.::...:.x....----.xx.:....--------.:..:......:.. 74M1I21M4D9M8D14M 86/118 72.9% 119/94230402 0.0% 13/118 11.0% 65697190 NA +3052 chr4 + 190214555 126549337 126549336 126549400 64 AGTGTCTAGAACAGTGTTGGCACAAAGTAGTATTCTTAAAAATGATTACTGAATGAAGAATAGA chr4 + 94230402 25977593 25977592 25977656 25977593 25977592 25977656 64 AATGACTAGAGCAGTCCTAGCACTAAATAGCAATCTTCAAAATGATTTCTGGCTTGGGAACAGA .:..x.....:....x:.:....x..:...:.x....x.........x...:x.x::...:... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 100571744 89642811 +3172 chr4 + 190214555 126605090 126605089 126605159 70 CGTGGTGGTGGGTGCCTGTAATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x::.--....:.x...........::........x.xx.x...x.:.........:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 50571893 NA +3970 chr4 + 190214555 126612985 126612984 126613303 319 ATATATATATAAAATATTATATATA---------GTATATATAATATATACTATATATAATATTATATACTTTTAATATGTAATTATATATATTATAACATATTATTTTATATACAATTAATATGTAATTACATGTAATATTACTATAATATATAT-TATTAGAGAGATATATCAAATATGTCACTT------ATTCACCTAATTTTT---TCATACGTTAAAAATAAACATATGATAGTCACATACTTGTGTTCTTTC------TACATACATTTCCAACAACTTTTCCAAGTTCAGTGTTGAGCAGTAAATATAACAGACAATTTTCCTCCTAGCAATGGAC chr4 + 94230402 63976918 63976917 63977219 63976918 63976917 63977219 302 ATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACAATATACATGTAAATTTTAACTATAGACTATATACTACA--GTTTTATAT--GACTAACata-aattatttgatat-ttattttaaattatatatattttagacat-tatattataatGCACTTCTGTAAAGTCATCTAGACTTTGGATTCTGCATTA---------------------------TGTTTCCTTTCAGGAAATATCTTCTTTCCCCTATTTTTTTCCATGTTTAG--------AGTACATATCACAAACAATTAACCCAATTTTAATGGAC ...:....:...x..:::..::...---------....x..............:....xx..:x......x.x...xx.x...:....x.:xx....x:.:.--:........--:.:...:..:-.....:x..xx..-...:.x...xx.....-....xx...x..-...xxx...xxx.....------.x...:...:x:...---.:x.:.:...---------------------------...x.:.....------..:x.x.x..:..xxxxx:.......x...:..--------....x....x...:......xx..:xx.xx:....... 25M9I68M2D9M2D10M1D13M1D16M1I12M1D17M6I15M3I10M27D11M6I33M8D38M 193/277 69.7% 302/94230402 0.0% 67/277 24.2% 62636067 NA +3027 chr4 + 190214555 126615028 126615027 126615093 66 AAATAAATAAATGAATAAATAAAATTAAGAAATAACAACAAAATAACAAAAAGAAAATACGTTAAG chr4 + 94230402 10448542 10448541 10448607 10448542 10448541 10448607 66 AAAGAAATCAATCAATAAACCAAATTAAAAAATAATTCAAAAATTAGACAAAAAAAATACTATAAG ...x....x...x......:x.......:......:xxx.....x.x.x...:.......xx.... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 116166486 74048069 +3032 chr4 + 190214555 126618960 126618959 126619019 60 ATGAGATTGAAGCCTTTTTTCAGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 134313 134312 134372 134313 134312 134372 60 ATGAAATTACATACTTTTTTCAAAACTACTGTTTTTTTTTTGGTTTTTTTGTTTTTTTTT ....:...:x.xx.........:x.:.x:.x..........xx.......x......... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 126484647 63729908 +3038 chr4 + 190214555 126631935 126631934 126632002 68 CCACTCTACATATGGCTAAGTTTTTGTTTGTTTGTTTTTGTTGTTGTTGTTTATCTTTTGTAGAGACA chr4 + 94230402 90249279 90249278 90249346 90249279 90249278 90249346 68 CTACTAAATGTATTTACATGTTGCTGTTGGGTTGTTTTTGTTGTTGTTGTTTGTTTTTTGTAATTACA .:...xx.::...xxx:.x...x:....x.x.....................:.:.......:xx... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 36382656 NA +3194 chr4 + 190214555 126651469 126651468 126651523 55 TGTATACATACGTATATATGTGTATATATGTATACATACGTATATATGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .....:.....:..:.:......:...:.....x.x:.:...::.:...:..... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 70957015 NA +13220 chr4 + 190214555 126696924 126696923 126697195 272 TTGGTAAATTCTAAGGCACAAAATCAAGTTAACAGTGCTTCTATTGTAATTGTTTTATCACATCTCTGTACATCAGATTTCAAAAACCAAAGACTCATGTTGAAATTGGCTAACAACCAAAACACTCACTGTCAAATTAACCGTTTCCATCTGAGGTGATAAATGGAGAGTTCATAAATGTGAACCATGGCATATGAAAAATAGCTCATTGACATCTGTTCTTAACATCTGGCTTTGTAATCGATGCACCAAAGCAAATGGGATATGCAATT chr4 + 94230402 53583863 53583862 53584132 53583863 53583862 53584132 270 TTTATAAATGCTGAGGTACAGGTCTGAAATAGCAGAATTTTCATTA-GACAGTTTTATCACATCTCTTTACATAAAATTTTGAGTAC-AAGTGCTAATGCTGAAACTGGCTATTAACCAAAACGTTTGCTGTCAGATTAAGTGTTCCCATCTGAGATGATAAATGGAGACAACGTAGCTATAAACTGTGACTTATGAAAAATAATTCATTGACATCTGGCTCTAACATCTGGCTTTGTAATTGTTCCTCCCAAGCAAATGGAATATGTACTT ..x:.....x..:...:...::x:::.:x..:...x::..::...:-:.:x................x.....x.:....::.:x..-..:x:..x...:.....:......x:.........::.::......:.....x:...:.........:.............xxx.:..:x.:.:...::..:.x...........::.............x:::...................:.x.x.x..x..........:.....:.x.. 46M1D40M1D184M 197/270 73.0% 270/94230402 0.0% 2/270 0.7% 73113061 NA +3099 chr4 + 190214555 126706735 126706734 126706803 69 TCTCAGCAAAAAGGAAGAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGACAGAAAGAAGGAAAGAAAG chr4 + 94230402 62475706 62475705 62475774 62475706 62475705 62475774 69 TCTCATTCAAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG .....x:x........:.:...::::.:::...x..:...:.........x.x....::.x:::..... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 64231029 NA +3259 chr4 + 190214555 126706776 126706775 126706863 88 AGAGAGAGACAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGACAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAAGA chr4 + 94230402 41112168 41112167 41112255 41112168 41112167 41112255 88 AGTGAGCTGCAGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..x...xx:...:..::::.....x..x...x...x....x::.....xx.....x..::......:.:x.x......x.:.::.:.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 85594608 NA +3094 chr4 + 190214555 126730315 126730314 126730385 71 AGTTTGCCTTCACTGCTTACTTTCTCCTTGTTTTTTGTTTTGTTTTGTTTTCTGTTGTTGTTGTTTCTTTT chr4 + 94230402 15853479 15853478 15853547 15853479 15853478 15853547 69 AGTTT--CTTTATTCCTGACTTCGCTGTTTTTTGTTGTTGTTTTTTGTTTTCTGTGGTTGTTTTTTTTTTT .....--...:.:.x..x....:x::x..x...x.....x.x.............x......x...:.... 5M2D64M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% 110876836 79337719 +3030 chr4 + 190214555 126741281 126741280 126741361 81 TATACATTCATACACATACGTATACATACATAC--ATGTATGCATATATATATGCATACATATATATGCATATATACATGCAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x....::.::x::.::..:.:::.:::..:--.....x.....:....:.:x......:.x......:.:.....::... 33M2I48M 52/81 64.2% 83/94230402 0.0% 2/81 2.5% 40906748 NA +3149 chr4 + 190214555 126744424 126744423 126744507 84 AGCCTGGGCAACAGAGCGAGACTTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTTATGAA chr4 + 94230402 43459364 43459363 43459444 43459364 43459363 43459444 81 AATCTGGACAAATAAAGGAAATATGGT---AAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAGTGAA .::....:...xx:.:x..:.:x.x..---.............x...x.....x.:.xx..............:..x:x:.... 27M3D54M 58/81 71.6% 81/94230402 0.0% 3/81 3.7% 83285060 NA +3217 chr4 + 190214555 126744463 126744462 126744498 36 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..................:................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 51444007 NA +3185 chr4 + 190214555 126744465 126744464 126744502 38 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTT chr4 + 94230402 75300456 75300455 75300493 75300456 75300455 75300493 38 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATT ................................:..x.. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 51444009 NA +3406 chr4 + 190214555 126744466 126744465 126744515 50 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTTATGAAAGGAGACT chr4 + 94230402 46677676 46677675 46677725 46677676 46677675 46677725 50 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACT ..............................x..xx:.:..:...:.:... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 80066790 NA +3137 chr4 + 190214555 126744468 126744467 126744513 46 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTTATGAAAGGAGA chr4 + 94230402 37997918 37997917 37997963 37997918 37997917 37997963 46 AAAAAAAAAAAAAAAGAGAGAGAGAGAAATAATCTTTTAAGAGAGA ...........................:.x...:.x.x..::.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 88746550 NA +3475 chr4 + 190214555 126782911 126782910 126782981 71 CACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAAGAGAATCGCTTGAACCCGGGAAGTGGAGGTTGTGG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:...........::.......:x.xx.x...x.:.........:.:.:x.xx:..:...:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 50749704 NA +3590 chr4 + 190214555 126783038 126783037 126783088 51 TAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATTTAAAAATCTATGAATTCT chr4 + 94230402 54665409 54665408 54665459 54665409 54665408 54665459 51 TGGAAAAAAAAAGAAAAAAGAGAGAGAGAGATTTCAAAATCTATCAGTACT .::.........:.....................x.........x.:.x.. 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% 72117629 NA +3213 chr4 + 190214555 126793805 126793804 126793879 75 ACACATATATATACATACATATATACATATATGCTTATATACATATATACACACATATATACATATATACACGTA chr4 + 94230402 25906385 25906384 25906459 25906385 25906384 25906459 75 ACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA ...:..x.:.x.:.......:..x..:.::.::...x...x........x......::x..:.:...xx:...:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 100887420 89327135 +3022 chr4 + 190214555 126793856 126793855 126793905 50 CACATATATACATATATACACGTATATATGTACATATATATATATATATA chr4 + 94230402 2675293 2675292 2675342 2675293 2675292 2675342 50 CACAGATACACATCTATGCACGTGTATATGTACATTTGCATGCATATGTA ....x...:....x...:.....:...........x.::..::....:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 124118563 66095992 +3155 chr4 + 190214555 126793870 126793869 126793940 71 TATACACGTATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:.:..:.......::........x.:.:x.x..x.xx.x..x:...x..:..............x:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 118970606 71243949 +3369 chr4 + 190214555 126793872 126793871 126793942 71 TACACGTATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ....:::......:....:......x.:.:x.x..x.xx.x...:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 118970608 71243947 +3337 chr4 + 190214555 126793874 126793873 126793948 75 CACGTATATATGTACATATATATATATATATATATATATATT------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGG chr4 + 94230402 7823255 7823254 7823338 7823255 7823254 7823338 84 CACGTAT---TTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAG .......---.x......:.........:.:......x.:.x------------..:...x..:..............x:.....:. 7M3D32M12I33M 59/72 81.9% 84/94230402 0.0% 15/72 20.8% 118970619 71243936 +3087 chr4 + 190214555 126793878 126793877 126793931 54 TATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792614 24792613 24792664 24792614 24792613 24792664 51 TACTTATGTA---AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ..:x......---.x...................x:........x......... 10M3D41M 45/51 88.2% 51/94230402 0.0% 3/51 5.9% 102001264 88213291 +3154 chr4 + 190214555 126793882 126793881 126793940 59 TATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:...:::.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 93542879 NA +3116 chr4 + 190214555 126793886 126793885 126793966 81 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGGGTATCACTCTGTCA chr4 + 94230402 34623076 34623075 34623156 34623076 34623075 34623156 81 TATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGATTTTTCCTTTTAATATTAGGCATTGTTTTTTCA ..:......xx......:......:.:....:.......:.x.:xxxx.....::....:.x::x:..:..:::.:.x... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 92170810 NA +3210 chr4 + 190214555 126816621 126816620 126816680 60 GCGCCTGTAGTACCAGCTACTTGGGATGCTGAGACAGGAGAATAGCTTGAACCCAGAGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..:.x......x...........::.x......x.xx.x...xx:............:.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 50783415 NA +3168 chr4 + 190214555 126885943 126885942 126886029 87 GAATAATTATGAGATTATGGAAAATCCCATACTCTTTTAGCAAATCTCCTTAATTATTATGATGGCTAATTTTATGTGTTAATTTCA chr4 + 94230402 81015907 81015906 81015993 81015907 81015906 81015993 87 GGAGAGTAAGAAGATTATGCATCCTACCATTTTCTTTGAGGAAATCCTAGTTGTTATTGAGCAGGCTAATTTTATGTCTTGATTTCA .:.x.:.x.x:........x.xxx.x....x:.....x..x.....::xx.x:.....:x.xx..............x..:...... 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 45870036 NA +3148 chr4 + 190214555 126886851 126886850 126886944 94 AAAAAATTTGGCATGGTGGCATGCACCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTGAACCCAAGCGGCAGAGGTTGCAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..xxx:..::....--.....x....:.:.........::::.....:..x.xx.x...x.:..........::x.x:xx:..:..:.. 19M2D73M 60/92 65.2% 92/94230402 0.0% 2/92 2.2% 50853665 NA +3222 chr4 + 190214555 126902337 126902336 126902421 85 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCATGAGGCAGAGGTTGCAGTGAGCCAAGATGGCGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.:...........::........x.xx.x...x.x..........x:..x:xx:..:..:..------..x...::.... 67M6D12M 57/79 72.2% 79/94230402 0.0% 6/79 7.6% 50869126 NA +3024 chr4 + 190214555 126945552 126945551 126945643 92 TTTTTATTTTATTTTTTTAATATTTTAAAATTAATATATAAGGTGACAGTAAAATGTCTACACTATTTCTACACTGGCTTTCATTTTTAAAA chr4 + 94230402 68548108 68548107 68548199 68548108 68548107 68548199 92 TTTTTATATTCTTTTTTTAACACTCTGAACTTTATATAGGCTGTCATATTAAAATGCGCTTGATTTTCTTTCACTGCCTATCATTCCTTAGA .......x..x.........:.:.:.:..x..x.....x:xx..x.:.x.......:x:x::x.x..::.x.....x..x.....::.x.:. 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 58397444 NA +3533 chr4 + 190214555 126960700 126960699 126960831 132 CTCAAAAAAAAAAAAGAAGAGAAGAGAGACAAGAAAAGAAA--AGAAGGAAAAGGAA--AGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAGAAAAAGAAAG-------AGAGAGAGAAAAGAAAGAGGGA chr4 + 94230402 65771198 65771197 65771340 65771198 65771197 65771340 143 CTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ..x.::.......:....x.:........x...x.x.:...--...:.:..:.:...--...xx.:...x::.x.xx:.:......:......:x:.:x..::::x.x......-------.:..xx..x...:...:.:x.. 41M2I14M2I55M7I22M 87/132 65.9% 143/94230402 0.0% 11/132 8.3% 61189502 NA +3618 chr4 + 190214555 126960714 126960713 126960876 163 AGAAGAGAAGAGAGACAAGAAAAGAAAAGAAGGAAAAG---GAAAGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAGAAAAAGAAAGAGAGAGAGAAAAGAAAGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044652 49044651 49044808 49044652 49044651 49044808 157 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAG---AAGCACTAAGTGAGAAAGGGAAGA---GTTAAAGAAAGA---AGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA .:....xx.:.....x.....x.::.:.xx...::x:.---........:.x.:x..:---.:.x.xx...x....:..:...:.---.xx.........---...:.::x....:.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 38M3I17M3D24M3D12M3D63M 99/154 64.3% 157/94230402 0.0% 12/154 7.8% 77916062 NA +3540 chr4 + 190214555 126960733 126960732 126960884 152 AAAAGAAAAGAAGGAAAAGGA-AAGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAG---AAAAAGAAAGAGAGAGAGAAAAGAAAGAGG-GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 49044652 49044651 49044808 49044652 49044651 49044808 157 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ......xx.:.::......:.-....x.xx.::..x:.xx..:...:x.::x..x....::x.xx...---:...:.:.....xx.:.....::.:.:...-...::.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:.... 21M1I46M3I30M1I55M 93/152 61.2% 157/94230402 0.0% 5/152 3.3% 77916081 NA +3274 chr4 + 190214555 126960744 126960743 126960810 67 AGGAAAAGGAAAGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAGAAAAAGAAAGA chr4 + 94230402 39594986 39594985 39595052 39594986 39594985 39595052 67 AGGCAAAAGGAGAAAAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAA ...x...:.:.::.x..:..xxx....:::..:..:..:.:.x....:.................:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 87365758 NA +3110 chr4 + 190214555 126960795 126960794 126960869 75 AAAAGAAAAAGAAAGAGAGAGAGAAAAGAAAGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 73744717 73744716 73744789 73744717 73744716 73744789 73 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGG--GGTGGAAAGCAAG ...:...........:..:..:.:.....:.:.:..::::....::..::.x::..x...--..x:.:...x... 60M2D13M 49/73 67.1% 73/94230402 0.0% 2/73 2.7% 53216078 NA +3275 chr4 + 190214555 126964531 126964530 126964586 56 AATAAATAGGAAAGGAGAAAGGAAGGAGGGAGGAAAAAAGAGAAAAAGAAAAAAGA chr4 + 94230402 39595000 39594999 39595055 39595000 39594999 39595055 56 AAGAAATTCAAGGGGAGAGGGGAGGGGGTGAGAAAAAAAAAGAAAAAGAAAAAAGA ..x....xx:.::.....::...:..:.x...:......:................ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 87369531 NA +3201 chr4 + 190214555 126964537 126964536 126964625 89 TAGGAAAGGAGAAAGGAAGGAGGGAGGAAAAAAGAGAAAAAGAAAAAAGAAAAAGAAAGGAGGGAGGGAGCAAGGGAAGGAGGGAATAA chr4 + 94230402 89498606 89498605 89498694 89498606 89498605 89498694 89 TAGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAA .......:..:.x:.:.:...:x:.::.x:x.:...:.xx.::..:.:x......x..:x............::x...x..::...x.. 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 37465931 NA +8802 chr4 + 190214555 127001689 127001688 127001954 266 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGGAGGGAGGGAGGGAGGGAGGTGGGGATGGGGGAGGGAATGAGGGAGGGGAGACAGAGAGAGAAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAAAAAGGAGAAGGAA---AGAAAGGAAAGGAAA--GAAGAGGAAAGGAGA---GGAGAGGAAAGGAAAGAAAAGGATAGGACAGGAAAGGAAAGGA chr4 + 94230402 1500702 1500701 1500969 1500702 1500701 1500969 268 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAG---GGGAATaaaggaaggaa-aatggaaaaaaaaaagaaagaaaatggaaatagaag--aggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGA .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:..::.x:.:...x.:x.x.::---...:..:::...:....-:.x...::::.:.x...:...:..x.:...x::...--......::.::..:::....:.::.:....::.::........x......:...---:........::.:..--...:..:...:..:.---..::.:...:.....:..x....x:.:..::::::.....:.. 80M3D17M1D36M2D54M3I15M2I15M3I43M 166/260 63.8% 268/94230402 0.0% 14/260 5.4% 125500987 64713568 +3967 chr4 + 190214555 127001692 127001691 127001913 222 AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA-----------GAAGGGAG-----------------------------GGAGGGAGGG---AGGGAGGTGGGGATGGGGGAGGGAATGAGGGAGGGGAGACAGAGAGAGAAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAAAAAGGAGAAGGAAAGAAAGGA------------AAGGAAAGAAGAGGAAAGGAGAGG chr4 + 94230402 51148242 51148241 51148516 51148242 51148241 51148516 275 AGGAGGGAAACAA--AAGGGAGGAGAGGAGGGTGGACGAGATGGAGGAATGAGATGGCTTCTCCCGGCGGGGGCCCACGGGCTCATCCGGCGCCCGCCGTCCGCTGGGAGAGCACGGGGCTGTGGCAAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ....:....:x..--....:....::.:...:x...x.::.x.:.....x..:.-----------.:x...:.-----------------------------.xx.....:.---:...xx....x:.xx..x.xxx:x.x:.:.:..::.xx...........:...:.......x::.:.xxx:...xx....x.::.x.x.:.:..x:..::..:........:.....::..x..x.------------......:.:..x.x:xx..:.... 13M2D39M11I8M29I10M3I126M12I24M 140/220 63.6% 275/94230402 0.0% 57/220 25.9% 75853450 NA +3297 chr4 + 190214555 127001799 127001798 127001875 77 GAGACAGAGAGAGAAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAAAAAGGAG chr4 + 94230402 51148396 51148395 51148472 51148396 51148395 51148472 77 GAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAG ....x...............x....:xxx..:.xx.:..x....x:x:..::.x:.::....::....:........ 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 75853403 NA +3150 chr4 + 190214555 127001804 127001803 127001868 65 AGAGAGAGAAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAA chr4 + 94230402 21613184 21613183 21613248 21613184 21613183 21613248 65 AGATAAAGCAAGAATGGGAAAAGACATGAAGGAAAGGAAAGCAGAAAGAAAATCAGAGGAAGAAA ...x.:..x.....x::....:..x:x:.............x......:...xx.:.....::.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 105388620 84825935 +3264 chr4 + 190214555 127001812 127001811 127001981 170 AAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAAAAAGGAGAAGGAAAGAAAGGAAAGGAAAGAAGAGGAAAGGAGAGGAGAGGAAAGGAAAGAAAAGGATAGGACAGGAAAGGAAAGGACACAAAGTTGTTCATTGTTATCTCAAA chr4 + 94230402 45017424 45017423 45017576 45017424 45017423 45017576 153 AGAGAAGGGGAACAGACTGTAAGGAAAGGCTGTTGGAAAGGAAAAAAAAGCGAAAGAAACAGAATGGGAGAGAAACAACATGAAAGAGACTGATAAAACTG----CGACTAGCATGAAGAAGCT------------GAAAGGACATAAA-TTGTCCACTGTTTCTTTGAA .:....:::...x:..xx.x.........xx:xx:.........::....x:..::...x:..:x:...:.....x:.x.x......::xx..x.::.xx.----x..xx:.x.x...:.:.x.------------.........:...-....:..:....x::.::.. 101M4D19M12D13M1D20M 96/153 62.7% 153/94230402 0.0% 17/153 11.1% 81984388 NA +3253 chr4 + 190214555 127035544 127035543 127035656 113 CAGTGTGTGTGTGTGTATATATATATATATATATATATAGGTATGTCAGGTAGTTAATAAAATATTATGTTATATTCATGAATTTGTGATGATTATGATTTGTCAGTTTTTTT chr4 + 94230402 48958672 48958671 48958769 48958672 48958671 48958769 98 CACTGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGA----------TTTTTCCAATC-----TTTCTCCTCATGATGATTGGTTAGTATTTTT ..x.......x...:..:........:.:.:.........:....xx..x....x.----------x.x..x:.x..-----...x.xx.x..x......x..:...x..... 56M10D11M5D31M 73/98 74.5% 98/94230402 0.0% 15/98 15.3% 78076872 NA +3473 chr4 + 190214555 127128004 127128003 127128086 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGGATCACCTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::........x.xx.x.:.x...:......:..:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 51094807 NA +3076 chr4 + 190214555 127159645 127159644 127159705 61 AAGAAGTTCTAGGAAAAGGGATAAAGGAGAAAAAGGGGAAGGAAAGAGAGGAAGGAGAAGA chr4 + 94230402 60708646 60708645 60708706 60708646 60708645 60708706 61 AAAAACTTTAAGTAACAGGAATAAAGGAAAAGAAATTGGAGGAAAAAAAGGGAGGAAAAGA ..:..x..:x..x..x...:........:..:..:xx.:......:.:...:....:.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 66450999 NA +3114 chr4 + 190214555 127213760 127213759 127213824 65 GCAACAGAGCAAGACTCCGTCTCAAAAAAAAAAGAAAAAAAAAAAAAAGTAAAGGGACACAACAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAA--AAAAAAAAAAAGCATAGAAGCACAATAA ....x:.........xx.x.........::.:.:.--............:.x..:::.....:.. 35M2D28M 48/63 76.2% 63/94230402 0.0% 2/63 3.2% 38831052 NA +3286 chr4 + 190214555 127219781 127219780 127219858 78 TACATACTAATATATAGTGACAGAAGTAAATACTTACAATGCTGTTAATTTATTAAAAAGAAATAAAGCATACTAATG chr4 + 94230402 6722178 6722177 6722255 6722178 6722177 6722255 78 TAAATACTAAGATACAGTTACAGTGGTATATGCTTAGACTGCAATCAATTTTTAAAGCATAAATGAAACATAATACTG ..x.......x...:...x....x:...x..:....x.x...x:.:.....x.x..:x.x....:..:....x..x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 120497603 69716952 +3406 chr4 + 190214555 127220470 127220469 127220537 68 TTATTCTTT--TTTATTGTAGAATAGTATTTCATTGTATATATATATATATATATATACACACACACACA chr4 + 94230402 41650559 41650558 41650628 41650559 41650558 41650628 70 TTATTTTTCACCTTGTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTA .....:..:--:..:..x...xx.x::........:x.:.................:..........::. 9M2I59M 52/68 76.5% 70/94230402 0.0% 2/68 2.9% 85569911 NA +3245 chr4 + 190214555 127220495 127220494 127220587 93 ATTTCATTGTATATATATATATATATATATACACACACACACACACATATATATA------TACACA------TATATATATATCA-CATTTCCTATATCCATTTG chr4 + 94230402 54005678 54005677 54005783 54005678 54005677 54005783 106 ATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTG ...x:....x.:.:....:...x..........:.............x.x..x.:------.:....------..:....:...x.-:...xx..x...x...x.. 55M6I6M6I13M1I19M 71/93 76.3% 106/94230402 0.0% 13/93 14.0% 73214817 NA +3165 chr4 + 190214555 127238338 127238337 127238387 50 CTGAAACTCCATCTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAACCT chr4 + 94230402 91067967 91067966 91068016 91067967 91067966 91068016 50 CTGCAACTACATTAAAAATTGAAAAGAAAAAGAAAAAAAAAAAAGAACCT ...x....x...:xx.....:....:.....:............:..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 36170371 NA +3202 chr4 + 190214555 127245077 127245076 127245134 58 TATATATATATATATATATATATATATATACACACACACACACACATACCCACAATGG chr4 + 94230402 53944239 53944238 53944296 53944239 53944238 53944296 58 TATATACTTATGTTTCTAAATTTATATGCACACACACACACACACATTAGCACAATGG ......:x...:.x.x..x..x.....::..................xxx........ 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 73300838 NA +3099 chr4 + 190214555 127245084 127245083 127245142 59 ATATATATATATATATATATATACACACACACACACACATACCCACAATGGAATATTAT chr4 + 94230402 85078510 85078509 85078568 85078510 85078509 85078568 59 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTGAAAGATTGT .......:.x....x.......................xx.xxx:..x..:..x...:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 42166574 NA +3397 chr4 + 190214555 127248723 127248722 127248797 75 GGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATGACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.::.x....:.:...........::........x.x:.x...xx.........::.:..x.xx:..:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 51215520 NA +3293 chr4 + 190214555 127256270 127256269 127256398 129 TGGACCGTGATAGAGCCA-CTGTACTCTAGTTAGGGTG--ATGAAGTGAGACTCTGTCAAAAAAAGAAAAAAAGAAGAAAGAAAGAAAGAGGGAGGGAGGGAAAGAGAAGGGGAGCTGTGTCTAAGTAAGCA chr4 + 94230402 71600998 71600997 71601122 71600998 71600997 71601122 125 TAAACAGTGACAAAACAATCTGTACTTCAGGAAGAGAGGAAGGAAGCAAAG-------AATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAGGTTAGCTGGTTCTAAGTAAGCA .::..x....:.:.:.x.-.......::..xx..:.x.--.x....::.::-------..x...x...x......::.x::.x.x:..x.x.:.:.:.::......:....xx.....xx............ 18M1I19M2I11M7D74M 81/122 66.4% 125/94230402 0.0% 10/122 8.2% 55655272 NA +3115 chr4 + 190214555 127298778 127298777 127298854 77 ATAAAGATAAAAGGACTAGTCCAACAGGAAAAATCACAATCACATATATATATATATATCTCACACACACACACACA chr4 + 94230402 47265504 47265503 47265578 47265504 47265503 47265578 75 ACAAGGACAGA--GAGCAATTTGACAAGATATTACACACACATATATATATATATATATGTCCTACACACACACACA .:..:..:.:.--..x:.:.:::...:..x.xxx....xx..:................x..x:............. 11M2D64M 54/75 72.0% 75/94230402 0.0% 2/75 2.7% 80033274 NA +3243 chr4 + 190214555 127314624 127314623 127314675 52 CTTATTAAAAATGATTCCTCATCTGGGAAAAAAAAGAAAAGATAAAAAAAGA chr4 + 94230402 58945523 58945522 58945574 58945523 58945522 58945574 52 CTTATTAAAAAGGCATCCTCACCTAGGAAAAAAAAAAAAAAACAACAAAAAA ...........x.xx......:..:..........:....:.:..x....:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 68369101 NA +3268 chr4 + 190214555 127343222 127343221 127343355 134 GTTATACACATATGTATACA--CACATGTTATACACATATGTATACACACATGTTATACACATATGTATACACACATATATACACGTGTATATACACATACACACACATATATACACGTGTATATACACATACACA chr4 + 94230402 46140794 46140793 46140906 46140794 46140793 46140906 113 GTTTTACAGATATGTGTGCATTCAAATGTATTGCA-----------ATAAATGTTACACTATTATTT---------TGTGTA---ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...x....x......:.:..--..x....xx.:..-----------.:.x......:..xxx...x.---------.:.:..---:.:..........:..x.x......:.:...............x.:x:... 20M2I13M11D21M9D6M3D51M 83/111 74.8% 113/94230402 0.0% 25/111 22.5% 81202428 NA +3240 chr4 + 190214555 127350864 127350863 127350953 90 TTAAAAAAAAAAGAAAAAAAGCAACATGCAATCACAATATAAGATTAGATTACATTCATGATTAATAAGCCAAGCACATAAGAAGATCTT chr4 + 94230402 42773659 42773658 42773748 42773659 42773658 42773748 90 TTAAAAGGAAAAGAAAAAAAAAGACATCCAATCATCAGATAACATTATATCACACAGAAGAGTTAAGAAATAAATGTGGAAAAAAATCTT ......::............:x:....x......:x.x....x....x..:...:xx.x..x.x.x:.:x:..:::::x..:..:..... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 84577205 NA +3849 chr4 + 190214555 127389590 127389589 127389663 74 GCGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACCCGAGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x.:....:...........::........x.x..x...x...........:::..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 51356386 NA +3140 chr4 + 190214555 127395225 127395224 127395284 60 TGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:.........:.::........x.xx.x...xx:.x.........:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 51362020 NA +3012 chr4 + 190214555 127395539 127395538 127395597 59 GTGCCTGTAATCCCAGCAACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x....:.:.....x.....::........x.xx.x...x..........::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 51362333 NA +3040 chr4 + 190214555 127395669 127395668 127395719 51 AAAAAAAAAAAAAAAAAGAGAGAGAGAGCATATATTCAAATATAAATGGAT chr4 + 94230402 31260749 31260748 31260799 31260749 31260748 31260799 51 AAAAAGAAAAAAACAAACTTAGAAAGAGCATATATTCAAGTAAGAGTGGAT .....:.......x...xxx...:...............:..x:.:..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 96134920 94079635 +3431 chr4 + 190214555 127396705 127396704 127396757 53 CTGTCCTGGGCTGCATGTGGCCTACAGGCCGTGGGTTGGACAAGCTTGCTCTA chr4 + 94230402 42994233 42994232 42994284 42994233 42994232 42994284 52 CTGTCCTGGGCTGCATGTGGCCCACAGGCCAT-GGCTGGACATGCCTCATCTA ......................:.......:.-..:......x..:.xx.... 32M1D20M 45/52 86.5% 52/94230402 0.0% 1/52 1.9% 84402472 NA +3081 chr4 + 190214555 127400648 127400647 127400740 93 CCCAGATGACATAATTCCCTATATCTATTTTATGTGTGTGTGTGTGTGTGTGTGTGTGCGCATGTGTGTGTGTGTTTTATAAATACACCTTAA chr4 + 94230402 65759956 65759955 65760045 65759956 65759955 65760045 90 CCCCAATACTTTGGTCTTTCATATCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATA---CATATGTACTACTTAA ...x:..:x:x.::.:::::.......:....x:.x....x..:...:........::::.....x.....:.:---:...x:...xx..... 74M3D16M 58/90 64.4% 90/94230402 0.0% 3/90 3.3% 61640692 NA +3229 chr4 + 190214555 127417142 127417141 127417214 73 ATACAAATATGTGTGTGTGTGTATATATATATATACACATATATATGTACATATATATGTATATATATACGTA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .....x..-........x:.::...:.:.....:..xx......x...:...:.....::.x:...:...::. 8M1D64M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% 70549850 NA +3180 chr4 + 190214555 127417174 127417173 127417280 107 ATACACATATATATGTACATATATATGTATATATATACGTATATATATATACATATATATATACGTA-TATATATATACATATATATACGTATATATATATACATATA chr4 + 94230402 56938584 56938583 56938690 56938584 56938583 56938690 107 ACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA-ACAGATACTGTATTCATTATTCTGTACATGCAGATGTATATGCATATA .:...:.x......xx.x.....x...x......::x:x.....:...x:.x.......-.:.x:..-.:...x:..xxx.x.:..:.:.:.x..:.....:...... 59M1D7M1I40M 72/106 67.9% 107/94230402 0.0% 2/106 1.9% 70478590 NA +3042 chr4 + 190214555 127417179 127417178 127417246 68 CATATATATGTACATATATATGTATATATATACGTATATATATATACATATATATATACGTATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:..:.......:.:....x::.:..:.x.:.:...:.x....:.:......:xxx:......:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 81353881 NA +3534 chr4 + 190214555 127417215 127417214 127417331 117 TATATATATACATATATATATACGTATATATATATACATATATATACGTATATATATATACATATATATATACGTATATATATATACATATATATACGTATATATATATGCTCTTAC chr4 + 94230402 21109194 21109193 21109310 21109194 21109193 21109310 117 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTAC ....:..:.:::.x.x.:.:x:.....x.....:...x:.:......x::.:..:x.....:...:..:x:.:.:x.x.:.:....::.:...:x.::.::..::.:.:.xxx.... 117M 68/117 58.1% 117/94230402 0.0% 0/117 0.0% 106308021 83906534 +3109 chr4 + 190214555 127441551 127441550 127441590 40 CTCCCTCCCTCTCTCTCTCTCTCTTGCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:....:...............x::.............. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 52193502 NA +3462 chr4 + 190214555 127441554 127441553 127441594 41 CCTCCCTCTCTCTCTCTCTCTTGCACACACACACACACACA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................:x.................. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 52193506 NA +3145 chr4 + 190214555 127454423 127454422 127454483 61 AAAAAAAAAAAAAAAAACTGGAGGTCCATCTGAGGGGAAAAACAAACAAACAAACAAACCT chr4 + 94230402 84319513 84319512 84319573 84319513 84319512 84319573 61 AAAAGAAAACAAGAAAAATGTAGGACTATGGTGAAGGAAAACCAAGCAAACAAACAAACCT ....:....x..:....x..x...x.:..xxx:::......x...:............... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 43134910 NA +3825 chr4 + 190214555 127520812 127520811 127520904 93 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCA----ATGAT-CCAAGC chr4 + 94230402 76033197 76033196 76033292 76033197 76033196 76033292 96 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGC ..::....::..:.--....:.:...........::........x.xx.x...x...........:.:..x.xx:..:..:.----.....-...... 14M2D66M4I5M1I6M 69/91 75.8% 96/94230402 0.0% 7/91 7.7% 51487615 NA +3419 chr4 + 190214555 127542441 127542440 127542523 83 CATCGTGGCACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTGGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....::...:--......:...........::........x.xx.x...x....x.....::.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 51509244 NA +3679 chr4 + 190214555 127548282 127548281 127548457 176 TGAAAAAGAAAAAGAAACAGAAACAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGA-------------------AAGAAAAGGAAAGAGAGAAAATG chr4 + 94230402 17246038 17246037 17246232 17246038 17246037 17246232 195 TGTGAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATG ..x:....:x.:x...x::::..:::.:x:.x..x:::.....:...:..x......x:xx::....x.:.:x:x...xx..:.x.::..xx:...:..::..::.:..:.:xx.xx.::..:.......:x....x.:x..:.......:x.-------------------......::x...:x.....:... 153M19I23M 101/176 57.4% 195/94230402 0.0% 19/176 10.8% 110302244 79912311 +3196 chr4 + 190214555 127548284 127548283 127548334 51 AAAAAGAAAAAGAAACAGAAACAGAAAGAGAGAGAGAGAGAGAGAGAGAGA chr4 + 94230402 43459393 43459392 43459443 43459393 43459392 43459443 51 AAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAGTGA .....:.....x.....:.......xx................::x..x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 84088891 NA +3283 chr4 + 190214555 127548287 127548286 127548431 145 AAGAAAAAGAAACAGAAACAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAA---------------------GAAAGAAAGAAAGAAAGAGAA chr4 + 94230402 17246063 17246062 17246228 17246063 17246062 17246228 166 AAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAA ...x..x..x.:x...:.x......x......x:xx::....x.:.:x:x...xx..:.x.::..xx....:..::..::.::.:..xx.xx.:.:.::......:x....x.:x:.:....:.---------------------::........x.:..x..... 124M21I21M 88/145 60.7% 166/94230402 0.0% 21/145 14.5% 110302224 79912331 +3833 chr4 + 190214555 127548300 127548299 127548478 179 AGAAACAGAAAGAGAGAGAGAGAGAGAGAGA------GAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG--AGAGAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAA-----------------GAAAGAAAGAGAAAGAAAGAAAAGGAAAG-AGAGAAAATGGAGCTTTTCTAGGTTTGTTTT chr4 + 94230402 17246064 17246063 17246266 17246064 17246063 17246266 203 AGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGGGTTCTTTT--GTTTGTTTT ..x.....x.::.....:...:..x......------....x.:.:x:x...xx..:.x..:..xx:...:..::..::.::.:..--.xx.:.:.:.......:x....x.:x..:....:.::x.-----------------::........x...:x:....:.x.xx:.-:.:.:.:.::.:.:.:..:.--......... 31M6I49M2I39M17I29M1I20M2D9M 112/177 63.3% 203/94230402 0.0% 28/177 15.8% 110302236 79912319 +3682 chr4 + 190214555 127548355 127548354 127548505 151 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGGAAAGAGAGA--AAATGGAGCTTTTCTAGGTTTGTTTTCTGTCAATTATGCTACTGCAGAAAGGA chr4 + 94230402 44866505 44866504 44866655 44866505 44866504 44866655 151 GAGAAAGACATACAG-GACAAAGAAAAACAGGGACAGCAAATAACTAGGAAAGAAATAGAATAATACAGAAAAAATGACAAAGGAGGGGGAAGAAAGAAGAAATGAAATGTGTGTATTTTTGTGCACATTTAATT-TCCTTCTGGAGCAAGAA ....:...x.x.x..-..x.:...:.:.x..:..x..x..:x..xx..........x.:.:x..x.x.....:.:x:.x....:.::..:....:...--.....:.::x.x.x..xx.....x:x.xx.:....-.x..x...x..x...:. 15M1D82M2I35M1D17M 98/149 65.8% 151/94230402 0.0% 4/149 2.7% 82681850 NA +3700 chr4 + 190214555 127548358 127548357 127548454 97 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGGAAAGAGAGAAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ...:...:::..xx.x.....................x.:.::xxx.:.:xx::..x.:..x.x:..::.x..:.....:.........::...::. 97M 63/97 64.9% 97/94230402 0.0% 0/97 0.0% 76399979 NA +3469 chr4 + 190214555 127569141 127569140 127569218 78 TGGCGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGAAGGTGGAAGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...:.--......:...........::........x.xx:x...x.:........::....x.xx::.:..:.. 9M2D67M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 51535939 NA +3201 chr4 + 190214555 127582944 127582943 127583004 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGCCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........x:xx.x.:.x.x.....:..::.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 51549740 NA +6684 chr4 + 190214555 127623185 127623184 127623666 482 CGCCGGGCTCCGAGA-------CCGGCAGGGGAGCACGCGGGCGAAGGAGGGGCCGCCGTC-GCTGACACCACCGCCTT----------CAGCCCT------TGGCTTCCGCGCGTCGG---AGGCTG-GCACCTCCAGGTTCACCGCGGCGGCCGGAGCTGTGCGGGGGCCAGACGGTTCGGCGGGAGCCGG-GGCTGGGA---------CCTGG--GTGACCTGTCGTCCGC----CCCTGT------------------AGCGAGTCTCCAGTGGGC---ATGTTTCAGGTGGGCAGGTCCAGCATCCCCAAACCTGCCCCCCGCAGCCTGGAGGACCTGGACTCAGTGCAGCGTGTCCTGTTACACAGGTCAGTGCAGGGCCCCGGGACGCGGGGCGAG-ACCGTCCTCTTGCCCCGGAAATGTTGGCGAGGGAGGGGC---CGCTTTTCTTTCTGGGGTCTTTCTGGAAGCATCTGACTTGGGA-------TTCGCCTTAGTGCGGCGCTGGCCGCGAAGGG--------CCGTTGGGACCTGCACCCCACCCTTTCCAGA chr4 + 94230402 35387808 35387807 35388353 35387808 35387807 35388353 546 CACCGTTTTCTGAGAGCCGCTTCCCGCAGGTGAGGATCCGGG-----ACGGGACAGGCGTCAGTAGGTCCCAGCGCCTTGGCGGCGGCCCAGCTCTGCCCGAccgcccccgcccctcggcgcgggccgcgcttcccccgccccgcggcggATTCGGGGGCTGGACGGG-------CGGGGCGGCGGAGGCGGGCGGCTTGAAGGGTTCCCACCTGCCCGCTGCCTCCCGCCCGCAGTCCCCGGTGCCGCGAGGCGGGCGATGAGGGGGCCGCGGGCGGGCGCGATGTTCGCTGCGGGCAGGTACAGCATCCCGCGGCCCGTCACCAGGAACCTGGAGGACCTGGACTCGGTGCAGAGCGTTCTGCTGCACAGGTCAGCGGCGGG-ACGGGGGCGGGAGGCGGGCGCCGTGCCGTCTCTCCG--AGGCTCGGCGGCGGGGGGCTTTGCGGCTTCCTCGCCGGGCTC-----GGGAGGCTGTGGCGGGGAGCGGGCCCCTCGGCGCAGCCCGGCTCGGAGCGAGAGAGGGGCAGGCAGCGGTGGGGCCCGAGCCCCCGGCTCTGCGGA .:...xx:..:....-------..x.....x...x.:x....-----:x...:.x.x....-.:x.::x...x......----------....:..------:x..::....x.x....---:...:.-..x:.:..x.x::.:.x....xxx.x..:....x:....-------...xx......::..x..-....x.:.---------....x--.:x:...x:..:....----...x..------------------..x.:.:.x.x:.:....---.....:xxx.:........x.........xx::..:.:.x..x.x.:..................:......x.:..:...:.:..........:.xx...-x.x...:..x.:....:.-:....x.:x.:x.:...--.:xx.:....:x..:...x:---..x:..:..:x.:...x..-----..:..xx.x..:.xx..::-------:...x.x:..:x....x.x.:x..x..::..--------x..x....:..:.x:....xxx..:.x.:.. 15M7I20M5D14M1I17M10I7M6I17M3I6M1I39M7D18M1I8M9I5M2I16M4I6M18I18M3I101M1D18M1I17M2D20M3I19M5D19M7I31M8I31M 306/462 66.2% 546/94230402 0.0% 104/462 22.5% 92235377 NA +3255 chr4 + 190214555 127639399 127639398 127639538 140 TCAAGGGGAGGAGGGATTAAA-CTTCATCTCCTGGAGTGGGGATTATCTATATGTATTGATTTCTTTAATTTAGGGAAGT-TGTAGTGAAA-GGTTAGGTTTTTGTGGGTTTTTTGTTGTTGTTGTTGTTAACACATCCCCTT chr4 + 94230402 68761349 68761348 68761479 68761349 68761348 68761479 131 TCAAGATGAGGTTGGGTTAACTCTACAATACCTACAG------------ATATTTCTTAATGCCTTTACATAAAACAGTTATGTAGTATGGTGGTTAGGTGTGTGGGGTTTTTTTGTTGTTGTTGTTGTTAATATATTTTTTT .....:x....xx..:....x-..x..x:x...:x..------------....x.x..:..x:.....xx.x.::x.:x.-......:x::-........x.x..x..x.......................:.:..::::.. 21M1I15M12D31M1I10M1I51M 89/128 69.5% 131/94230402 0.0% 15/128 11.7% 58878050 NA +21100 chr4 + 190214555 127643491 127643490 127644062 572 TATTAAGATTATC---------TTTTCTCTCTTTCATAGTGATCTTGAGCCTGAATGGCTGGACAGTGTGCAGAAAAATGGAGAGCTGTTTTATTTGGAATTGAGTGAGGATGAAGAAGAAAGCCTCCT------------TCCTGAGACACCAACTGTGAACCATGTCAGGTTCAGTGAAAATGA---GATTATCATTGAAGATGACTACAAAGAAAGAAAAAAGTATGAACCCAAACTCAAGCAGTTTACCAAAATTTTAAGAAGGAAAAGACTTTTACCCAAGCGCTGCAATAAAAAAAATAGCAATGA---------------CAATGGACCAGTATCCATTCTAAAGCATCAGTCCAATCAGAAGACAGGAGTCATTGTCCAACAGCGATACAAAGATGTGAATGTTTATGTAAACCCCAAAAAGCT------AACTGTTATCAAAGCCAAAGAGCAGCTCAAGCTTCTGGAAGTGCTGGTTGGAATTATTCATCAGACCAAGTGGAGCTGGAGAAGAACCGGAAAGCAGGGTGA---------------------------TGGAGAGAGGCTTGTGGTTCATGGCCTGCTGCCAGGGGGATCTGCTATGAAGAGCGGTCAGGTACTCATTGGTAAGT chr4 + 94230402 35394395 35394394 35395026 35394395 35394394 35395026 632 TATCAGAACTATCACTGATTGTTCTTCTTTGTTTCCCAGTGACCTTGAGCCTGAATGGTTGGATGGTGTGCAGAAAAATGGGGAGCTATTTTATTTAGAAATGAGTGAAAGTGAAGAAGAAACTTTACTTCAGAACGCCTGTCCAGAAATACCATCGGTGAATCATGTCAGATTTCGTGAAAATGAAGCGGAAGTTATTCAGGAGGGATCACGAAAAGAAAGAAAGTATG------AACTGAAGAAACTGACAAAAATCTTAAAGAAGAAGAATCTTTTACCAAAGCATTCTAGTAAGAAAGGAAGTGGAAGCTGTAACGTGCGCTCCAGTGGTCCAACTTCCATACTGAAACACCACTCCACTCAGAAAATGGGTGAAA---TACAGCAAAAGTACAAAGATATCTATGTTTATGTAAATCCCAGAAAACTGTTGGGGAATGCTGGAGAAG---ATGAGCAGCACAGGCTGCTAGAGGCCTTGGTAGGAATTCTCCATCAGTCTTCGTGGAGCAGCAGAAGAGCAGAAAAACAAGGCAAGAAGGATAAGGTCACCAGAGGAATCAGTGAAGAGAAGCTTGTAGTACATGGCTTGGTGCCTGGCGGTTCAGCAATGAAAACAGGCCAAATATTGATTGGTAAGT ...:.::.:....---------.:....:.x....x:.....:...............:....::................:.....:........:...x.......:::...........x::.x..------------...x..:.:....x.x.....:........:..:x..........---.:xx:.:...x.:..x.:x.xxx:.:..::..:........------....x...x.::.x..x.....:....::.:...:.:x........x....::.x:.:...:...::x..:::x::---------------..:...x...::x.....x..:..:..:..x....x......:.::..x.xx.---.x..:..:x::.........:.xx.............:....:...:..------:.x..:.:xx:...---.x.......x..:...x..:..:.:x:....x......x.:......x.:xx.......x.x......:.x.:...:..:..::.---------------------------..:.....:......:..x......:..x....x..x..x..x..x.....:.xx..:..::..:.x.......... 13M9I107M12I45M3I41M6D76M15I53M3D49M6I14M3D85M27I77M 400/560 71.4% 632/94230402 0.0% 84/560 15.0% 92249096 NA +7305 chr4 + 190214555 127656612 127656611 127656816 205 CTTTTATTGTTATTCTGGTTTCAGGTGATGTCCTTGTTGCTGTGAATGATGTCGATGTTACTACTGAAAACATCGAGAGAGTTCTGTCTTGCATTCCTGGACCTATGCAGGTA----TGGACATTCTTTTTCTATATTTTATGATGTTACATAAAATAAATATATAAATATATCGTGCACTATTTTCCTTTTTAAGCGTCTGAAAAGTA chr4 + 94230402 35403547 35403546 35403736 35403547 35403546 35403736 190 CTTTTATC--TCTTTTATTTCCAGGAGATGCTCTAGTTGCTGTAAATGATGTCGATGTGAATTCTGAAAACATAGAAAGAGTTTTGTCTTGCATTCCAGGTCCTATGCAGGTACAGTTGAACGTTTATTCCTAATGTCCTTTGA--------AAAATTAA---------ATAGTATGTATAGTCTTTTTTTTTTTCCTTTGGAAAAGTA .......:--.x..:.:x..:....x....::..x........:..............x.x.x..........x..:......:.............x..x............----..:..:..:x..:::x..:.::.x...--------.....x..---------...x::..:.:x:.:..::.....xxx.x.:x........ 8M2D103M4I27M8D8M9D40M 138/186 74.2% 190/94230402 0.0% 23/186 12.4% 92253065 NA +6905 chr4 + 190214555 127667112 127667111 127667408 297 TCCGGGATGATAACATC--CTGAATCTTTCTAAGTCGTT--TTGGAGTAAGATACTGCTAAGACCTTTTGTCATCCTTGCCTTT-CTTTCCATGGGAAAGTGTGTAGATGTTTCTCAAAAGAACAGGTTTCTGT-------------------------------------------CTGTTGCCAGCCCTGTATCAACATTGTAATTAAGA------GAGGCTTTTATTCTTATTGAACAGAGTGGAAGCTGCTGCAAATGCATGCTACTAATAAGTGCTTAAAAATACAGCTAATTAAATTGGTTAGGAACCGTAGAGCTTGCCAGGTCT-TTAATAGTGAGGCTTTTAT chr4 + 94230402 35412787 35412786 35413132 35412787 35412786 35413132 346 TCCTGTATGGTGATATGTGCTGAACCTTTCTAGTTCATTAATATATATATGATTCAGCTATGACCTTTTGTTACAGTTGTCTTTTCTTTCCCTGGGAAAGTATTCAGATAATTCTCAAATGAAT---TTTGTGTAAAGGACCCCATTCATAGTGAGGAGAGAAAAAGAGAGAATGTTTTCTTTTTAGTCCTTTGT-AGTGCTGTAATTAGAAAGTGGTGGGGTTTTTTTTCCTGCTGAG-GGATTGATTTAAGAAAAAAATCGATGTTACTAATGACTATTTGAAAATAAAGCTAATTAAATTGGATAAGAA-TGAAGAGTTTGCCAGGTCTGTCTACAATGAAACATTAAT ...x.x...:.:.:..x--.....:.......:x..:..--.xx:x:..x...x.x....x..........:.:xx...:....-......x.........:.x:....:x........x...:---...x...-------------------------------------------:.x..x::..:...x.:.-.::::........::.------.:..:....x...:.::...:-:..x..:xxxxx.xx:x....xx...:.......:.x.::..:......x...............x..:...-:.x....:...........-.:x.:.:...::.x..x.. 17M2I20M2I43M1I39M3D7M43I18M1D16M6I21M1D72M1D19M1I19M 203/291 69.8% 346/94230402 0.0% 61/291 21.0% 92254325 NA +7505 chr4 + 190214555 127669032 127669031 127669188 157 ACAGCAGGAAATTCTTTATCATTATCCAATGTCTGAAGCATCTCAGAAACTTAAAAGTGTGAGAGGGATTTTTCTCACACTCTGTGACATGCTGGAAAACGTAACTGGGACACAAGTTACTAGGTAATAAT--------TTTTATTTAGCTTTAATTCTGTTTTT chr4 + 94230402 35414034 35414033 35414195 35414034 35414033 35414195 162 ACAGCAAGAAATTCTTTATCAGTACCCCATGTCAGAAGCATCCCAAAAACTGAAAAACGTGAGGGGAATATTTCTCACCCTGTCTGACATAATGGAAAGTGTTACTGGTGCCCAGATTCTCAGGTAAGAATAGTTGAGATTTTAT---GTGTTACTTCTTTTCTT ......:..............x..:..x.....x........:..:.....x....::.....:..:..x........x..x.x......:x......::..x.....x:.x..::..x::......x...--------......---.:x...x....x..:.. 131M8I6M3D17M 119/154 77.3% 162/94230402 0.0% 11/154 7.1% 92254998 NA +5644 chr4 + 190214555 127674116 127674115 127674220 105 TTTCTTAGTTCATCCCTCCTTTTAAATGGAAAACAAATTCATGTGGCTTATTGGAAAGAATCTGACAAGTTGTTGCTAATTGGCCTGCCTGCTGAAGAGTAAGTT chr4 + 94230402 35417075 35417074 35417179 35417075 35417074 35417179 105 TTTTCTAGTTCCTCCCTTTTCTTGTGTGAAAAACTAGTTCAAGTTGTTTACTGGAAAGAATGTGACAAGTTGCTCGTGATTGGCCTTCCTGAAGAAAAGTGAGTT ...::......x.....::.:..:x:..:.....x.:....x..x.:...:..........x..........:.xx.:........x....xx...:...:.... 105M 79/105 75.2% 105/94230402 0.0% 0/105 0.0% 92257041 NA +3379 chr4 + 190214555 127676446 127676445 127676528 83 CACAGTGGCATGCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGGGCCTTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.....x..................::........x:xx.x.:.x::....::..:x.:..x:xx:..:..:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 51643249 NA +5449 chr4 + 190214555 127684402 127684401 127684492 91 TTTTTAGAGTTCCTCTTCCTCGTCTAAGGAACATGATAGAAAATGTCATCCAAACCTTAAAATTTATGTATGGTTCTTTAGATAGGTAAGT chr4 + 94230402 35417743 35417742 35417833 35417743 35417742 35417833 91 TTTTTAGTGTGTCGCTTACTCAGCTGAGGAACATGATTGAAGATGTTGTCAGGACCTTAAAATTTATGTACAGCTCTTTAGACAGGTGAGT .......x..x:.x...x...:x..:...........x...:....::..x::.................::.:........:....:... 91M 71/91 78.0% 91/94230402 0.0% 0/91 0.0% 92266659 NA +3021 chr4 + 190214555 127684685 127684684 127684741 57 TTATTCCTCCACCTCCTTCTTTTTCTCCTTCCTCTTCTTATTTTCTCATCTTTTATT chr4 + 94230402 57538441 57538440 57538497 57538441 57538440 57538497 57 TTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATT ..:..x..::x:..:....x:.::..........:.x..........x..:...... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 70146244 NA +13392 chr4 + 190214555 127687637 127687636 127687875 239 TTTCCATATGTCGTTCTAACTTACAGCTCTTATTTCTCCAGTGCCTTTTGCCAGATTGAGAATGTTCCTCGTTTGGATCATTTTTTTAACTTGTTCTTTCAAAGAGCACTTCAGCCTGCGAAACTGCATTCCAGCGCCAGTCCCAGTGCTCAGCAGTACGATGCTTCCAGTGCAGTACTTTTAGACAACCTCCCTGGAGTCCGGTGGCTCACACTTCCACTGGAAATCAAGGTAATCTT chr4 + 94230402 35418884 35418883 35419122 35418884 35418883 35419122 239 TTTCTTGATGCTATTTTAACTTGCAGTTCATGTTTGTTCAGTGCTTTTTGCCAGGTGGAACATGTTTCTCGTCTGGATCATTTTTTCAACCTGTTCTTCCAGCGAGCACTTCAGCCTGCAAGACTCAACTCAAATGCCAGCCCCAGTGCTCAACACTACACTACCTGCAGTGCATTATTCTTAGACAGCCTCCCAGGCTTGCGCTGGCTGACTTTGCCTCAGGAAATCAAGGTGATCTT ....:xx...:::..:......:...:..x.:...x.:......:.........:.x..:x.....:.....:.............:...:.......:..:x................:.:...xx.:..x.::.....:...........:..x...:x.:.:.x.......x..:.:.......:......x..xx.x..x.....x..x:.x..x.x............:..... 239M 182/239 76.2% 239/94230402 0.0% 0/239 0.0% 92268753 NA +4109 chr4 + 190214555 127689615 127689614 127689731 117 TGATTGCACCACTG-CACTACGGTGGGGCAACAGAATGAGACCCTATCTCAGGAAAGGAAAGGAAAAGGAAAAAGAAGAGGGAAAAGGGAAGAGAAAAGGAAAAAGGAAAGGAGAAAG chr4 + 94230402 84536521 84536520 84536636 84536521 84536520 84536636 116 TAGTTTTGCCACTGACAGTATGA-GTGCCAGCTGAATGAGGCCTTGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAA-GTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAG .::..x::......-..x..:.:-.x.x..:.x.......:..:.:..xx:.......:..:.....::.x..x:..:.x:.:..-.x.....:......:...:...:....::... 14M1I8M1D61M1D32M 79/115 68.7% 116/94230402 0.0% 3/115 2.6% 43153094 NA +3463 chr4 + 190214555 127689670 127689669 127689777 108 GGAAAGGAAAAGGAAAAAGAAGAGGGAAAAGGGAAGAGAAAAGGAAAAAGGAAAGGAGAAAG----------AAAGGGGAAAGGAAAGGGGGAGGGAAGAGGCAAGGGAA---------GGGAAGGG chr4 + 94230402 18344025 18344024 18344148 18344025 18344024 18344148 124 GGAGTGGAAAGGGAGGAGGAAGAGGAGAGAGGGAACAGGGAAGGAAAATAGCAAGTAGGAAATGGGAGCCTCCAAGTGGAAAG---AGGAGAAGGGTAAAGCCCCTGGGATTTGATGCCGGGAAGGG ...:x.....:...::.:.......::.:......x..::........x:.x...x..:..:----------x...x......---...:.:....x.:..x.xxx..:.---------........ 62M10I11M3D24M9I8M 76/105 72.4% 124/94230402 0.0% 22/105 21.0% 109345645 80868910 +27093 chr4 + 190214555 127705571 127705570 127706956 1386 TCTTTGTGGTTAAATTCAAGGGTTATTTGATATGCAGTCATTTGCCCAAGGATGATCTTATTGATATTGCCGTATACTGTCGCCACTATTGCCTGCTGCCTTTAGCAGCAAAACAAAGAATTGGTCAGTTGATCATATGGAGAGAAGTGTTTCCTCAGCATCACCTCCGACCTTTGGCAGACTCAAGCACTGAAGTCTTTCCGGAACCTGAAGGAAGATATTTTTTGCTAGTTGTTGGCTTGGTAAGTTTACCTCAGCTTCTTTCTTAGG-ATTTTTCTTCTTTTCT-------TTTATTTTTTTCTTTTCGGCAGGGGTTGAGGGATGCAGCGGTAGGTAGGTATCTATTGACTGTCTAAATAAATACACAAACATGCTCATGTAAAATTATTAGTATGTCTAATATCAGTATTCAAGGAAATGTTACATGTCCCCTTATTCCTTTTCTTTTGCATCCATTTAATACTCATGGACAAATATTAATAAAGTCTAAGAAAATATTTTAGCAGGTTTTTAAAGTCTTTTGTTCCCCTTTCTAT----AGTGGTTTTATCCATTGG-CTTGTTTTGGGAGATAGAGGGAGACATGAAAATAATATAGAATCAGAAACAGAATAAATATGCAATTGTAGATGAAAGGACTTCCAGTAACTGAGGCTCTTGACAGCTATCTTAGGGAATTCTGTGTCTCAAAAGAAGTGGTTTGATGGTATATCAAGATAAGGCAATGTAAGATTGTTTTCAACTGGGATCAAGAAGCATTAATAATAACCAAAAAGGAAAGATGACGGAGGAATTTTTAAT--AATCATCACATGATTATGCCATAGGCCTCTATGTCTTCGATATTTATAAGTTTATACATGCACATTTTATGTAAATATTTTCATGGTAGCTAAACCTACATTTGTAATTTTTTTCCCTATAGAAACATTATATGCTATGTGTACTATTAGAAGCTGGAGGTTGCGCATCCAAAGCTATTGGGAGTCCTGGACCAGACTGTGTATATGTGGATCAAGTCAAAACAACTCTTCACCAGCTGGATGGAGTAGATTCTCGCATAGATGAACGGCTAGCATCTTCTCCAGTCCCCTGTTTGTCTTGTGCTGACTGGTTCCTTACTGGATCACGTGAAAAAACAGATAGCTTGACCACTTCGCCTATTCTCAGTAGGCTACAAGGTACTTCCAAAGTAGCAACTTCTCCAACATGCAGAAGAACGCTTTTTGGTGACTATTCCTTAAAGACACGCAAGCCTAGTCCTTCCTGTAGTAGTGGAGGATCTGACAATGGTTGTGAAGG---TGGAGAAGATGATGGCTTTAGCCCCCATACTACACCGGATGCAGTACGGAAGCAAAGAGAATCTCAGGGCTCTGATGGTTTAGAAGAAAGTGG chr4 + 94230402 35424566 35424565 35425763 35424566 35424565 35425763 1198 TTTCTGTGTTCAA--TTAAGGGTTACTTGATTGGCAATCACTTGCCAAAGGAAGATCTCATTGATATAGGTTTATATAGCCAGCACTATTGTCTGTTACCCTTGGCAGCAGAACAGAAGATTGGTCAGTTAGTGATATGGCGGGAAGTATTTCCACAACATCATATCCAATCATGTGAAGTGCCAGATTTTACAGGATACACTGAACCCGAAGCGAGATACTTCTTATTGATAGTTGGCTTGGTAAGTAAGCAT----TTCCCTGTTAGGTATACCCCTTTTTGTATGCTCCGCTTTATTATTGTTTTGTC---------------------------------------TGA-TGTTCAGCAAGAT-CATAATTGTCCACATGTTAATTTAGTA-----------------ATTTTAGAAAAT---------------ATTCCTATTTT-----ATCTGTTT------CATGGGACATTATTTCTTAGGT---AGTAGAATTGTTTGCATCTTGTTATTTTTATACTTTTCCACTTCAGTTGGAAATGTTTTACTTTAATGATCCTGTATTTTCAGATA-----ACTCACTGAAAAAATGTTTTTTTA-------AATCATTATGCTTTT-------------TGTCTAATATCTGATGAGTATGTAAACCAT-------AGCTTTCATTTGCATGATAACT---TAGATAATGT-----GAAAGGATAACTTAAAAATGGCTCTG---GGGAGGAGGAAGCGCTCCT-----------------GAGTATAGTACTGTTTTTTGTCCAACCATCTGGTGA-------------------------GATATAATATAGTAAATA---GTGTATTTTAAATCAA-----------------AGGCTAATGTTGCTACCTCCATGTTTACAGAGACACTTTATGCTGTGTGTTCTGCTAGAGGCAGGAGGCTGTGCATCAAAAGCCATTGGGAATCCAGGACCAGACTGTATATATGTAGACCAGGTCAAAGCCACTATACTTCAACTGGAAGGTATAGATGCCAGCATAGAGGAGAGGCTAGATTCTCCTTCCATTCCACCTTTATCTTGTGCTGACTGGTTCCTTCCTACAACACGTGACAAACTGGAGAGCTTAACCACCTCGCCTATCCTAAGTAAGATACAAAATGCCTCCAGAACAGGAACTACTCCAGCAAGCAAAAGGACTCTGTTTGGTGACTCTTCCTTAACAACACGTAAGCCAAGTCCTACAAGAAACAGTGGAGGACCTGACCATGGTAATGAAGGTCCTGCAGAAGATGAAAGCAATAATCTACACTCTCTAGCAGATCAGGTCTGAAAACAGAA--------CAGGTTTTGGTGGGCTTGGGGAAAGTGG .:.:....x.:..--.:........:.....xx...:...:.....x.....x.....:........x.x:x....:x.:.:x........:...:.:..:..:......:....:.::...........::.x......x.:.....:.....x..:.....:x...:.:.x.xx.x..xx:..:::x:.:x..xx.x:x.x.....:....x:.....:..:..::.::.x...............xx:.x.----...::.x.....-..x:::...:..x.x.-------......x..x.:..x..---------------------------------------...-...::.:xx.:..-..:..x::.x.x.....x..x...x..-----------------...:x..:....---------------......x..:.-----...::...------.....:xx.x....xx.x.:..---..x.:.xx.x..x...xx..x...xxx.:x.x:x..:..x:...x:.----.:..x...xx.::.x..:-.:...x..xxx.....-----.xx..:x:...x...:.xxxx.:.-------...x.x.....xx..-------------:x..:.:..x....x.xx:x..xx.:.:..-------.::.:.xxx.:x..x:.x..x.---.x...::.:.-----..x.:.::..:x...:.x..x:.:::---....xx.:.....::.xx.-----------------..xx.::.x:xx:.....x:.--..:....xx:...-------------------------.....xxxxx...xx...---.:::......x:.x..-----------------.:x...xxx...:x.::.::x.x::..:...:...:.x......:.....x..::....:..x.....:..:.....x.....:.......:...x............:.......:..:..:......:.x...x.x.x:..:.....x..x:.....x.:x.......x..:x......xx...:..:.x:.:..x:x...:.....................x..:x.x.......x...x::..x.....:.....:........:..x....:.x.....::.:.:....:.::..x....x.....:..x...:...:..x..x..........x........x:.....:.....x......x.xx.x.::.........:.....x.....x:......---..x.........x:..xx..::.:x..:x..x:.x.:...xx:..x:.:..:..:.:--------x:..:.:..:...x:.x.::........ 13M2D239M4D12M1I16M7I17M39D3M1D13M1D27M17D12M15D11M5D8M6D22M3D47M4I18M1I16M5D24M7D15M13D30M7D22M3D10M5D26M3D19M17D21M2I13M25D18M3D16M17D407M3I57M8D28M 789/1180 66.9% 1198/94230402 0.0% 224/1180 19.0% 92281005 NA +3010 chr4 + 190214555 127707389 127707388 127707441 53 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAATATCAAATAATAAGATAAGA chr4 + 94230402 26088073 26088072 26088125 26088073 26088072 26088125 53 TCCAAGAAAAAGAAAAAAAAAAAGAAAAAGCAATGTCAAATAAAATGCTCAGA ..:x.:.....:...........:......x...:........x.x.x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 101619316 88595239 +6952 chr4 + 190214555 127708494 127708493 127708686 193 TGTTTAATTTTTAAATTG----TTTCTGCTATATGATTCCATTCTT-------AGATATAAACTG---ATCTACTTAACTA--TATTTTTCAGGTCACTAAAAAGAAGTCTACTCTTCCAAATCCATTTCATTTGGGAAACTTGAAAAAGGACCTTCCAGAAAAAGAATTAGAAATATATAACACAGTGAAGTAAGAAACTTTCTTATT chr4 + 94230402 35426148 35426147 35426355 35426148 35426147 35426355 208 TATTTTTCTTTTAAATAGGTAATTTCT-TTATTTAATTCTATTCTTTCCTTGTCAATATCTTCTGTTAGTTCACCCATCTACTTGTTTTTCAGGTTGCTAGAAAAAAACATACTCTACCAAATCCATTTCATTTAGGAAACCTTAAGAAGAACTTGTCAGAGAAGGACATGGAACTTTTTAACACTATCAAGTAAGAAATTGTTTTTTT .:...xx:........x.----.....-:...x.:....:......-------x:....xxx...---:.::..::.x...--.:..........::...:...:..::x......x.................:......:.x..:...:..:.x:....:..:..xx.:...x.x.x......x:.x..........:.x.:..x.. 18M4I5M1D18M7I12M3I13M2I126M 140/192 72.9% 208/94230402 0.0% 17/192 8.9% 92282346 NA +12579 chr4 + 190214555 127710865 127710864 127711220 356 TTTACTAAAATTTCTTTTTTCTTCTCTT-----------TGATTTTTTTTCTTTTTAAGACTGACATCTGGTCCTGAGAACACACTTTTCCACTACGTTGCCTTAGAAACAGTGCAAGGAATCTTTATTACTCCTACCCTTGAAGAGGTGGCACAGCTAAGTGGCTCTATCCACCCTCAGCTAATAAAGAATTTCCATCAGTGTTGTCTTTCCATTCGTGCAGTTTTCCAACAGACATTGGTGGAAGAGGTAGGGCACTGCTATAAATACAGTTTTCTGCCAGTTTAATTTCCAGATCTCTAAGCATTCTGTTATCTAATCAATATGCCCAGCATTGTTTTCATTTCATTAAGTTTTTTTAAATAGT chr4 + 94230402 35426887 35426886 35427223 35426887 35426886 35427223 337 TTAACTGAAATTTCATTCAGATTTATTTAAATATTAAAATGATTATCCTATTTTTGAAGGTTGACATCTGGTCCTGAGAATACCCTCTTCCACTATCTATCTTTGGAAACAATGCATGGAATCTTTATTACTCCGACTCACAAGGAAGTTGCACGGCTCGGGGGCTCCATCCACCCTCGGTTAATTGAGAATTTCCATCGTTGCTGTCTCTCAATTCGTTCAGTTTTTCAGCAGTGCATGATGAAAGAAGTA---------TGTAAGCTTTGTTTTCAGCT-------TTTC----TCTCTATTTACGCTCTCAATTTATTATT----TCAATATTATTTTCACTTC------TTTGTTTAAAAAGT ..x...:.......x..:xxx..:x:..-----------.....x.::.x:....x...::...................:..x..:........:x.xx.:..:......:....x.................x..:.x::.:..:..x....:...x:.x.....:..........:.:....x:............:x..:.....:..x......x.......:..:...xxxx..:..:....:...---------.:...::x:x......x..:-------....----......xx:.:x..x.:.x:.x..:.x.----:..::...:......:...------...x......x... 28M11I213M9D20M7D4M4D28M4D19M6D14M 238/326 73.0% 337/94230402 0.0% 41/326 12.6% 92283978 NA +6517 chr4 + 190214555 127713909 127713908 127714099 191 ATACTAACAAT--ACCTATTAATTTACAGAAAAAGAAAGGACTAAATAGTGGAGACCATTCAGATTCTG----------CAAAGTCAGTGTCTTCTCTTAACCCTGTTAAAGAACATGGTGTGTTGTTTGAATGTTCACCTGGAAACTGGACTGATCAGAAAAAAGCACCACCAGTTATGGCTTACTGGGTAGTAGGGTAAGT chr4 + 94230402 35429498 35429497 35429687 35429498 35429497 35429687 190 ATACCAACACTTCACCAACTGTTTTACAGAAAAAGAAGAAAGCAGGCAGTA-AGACC--TCAGAATTTAGTAGTACCGATGAAGACA----------TTGGTCCAGTAAGGGAACACGGAGTTCTGTTTGAGTGCTCTCCTGAGAACTGGAATGATCAGAAGAAACCACCACCAACACTGAGTTACTGGGTTGTGGGGTAAGT ....:....x.--...x.:.:x...............:::.x:.:::...:-.....--.....x.:.:----------::...x..----------..:::..x..x.::.....:..x..x:.......:..:..x....::.......x.........:...x........::xx..:x.........x..:........ 11M2I38M1D5M2D10M10I8M10D106M 130/178 73.0% 190/94230402 0.0% 25/178 14.0% 92284411 NA +7938 chr4 + 190214555 127716305 127716304 127716451 147 TGTGTTCTTTTCTTCTGCAGGAGACTTTTTCTTCATCCAAAACCTCAAGAACTTTATGTCTGTTTTCATGACTCAGTCACAGAAATTGCCATTGAAATAGCTTTTAAATTGTTCTTTGGGTTAACCTTGTAGCTGTGCTTTCTTGAT chr4 + 94230402 35430595 35430594 35430739 35430595 35430594 35430739 145 TGTGTTCTTTT--TCTTCAGGAGACTCTTCTTGCATCCAAAACCACAGGAGTTTTATGTTTGTTTCCATGACTCAGTCGCGGAAGTCGCTGTTGAGCTGGCCTTTAAGCTGTCCTTCGGTTTAGCTACGTAGATGAACTTCCTGAAT ...........--...x.........:..::.x...........x..:..::.......:.....:............:.:...:.:..::....:x.:..:.....::...:...:..x...:.:x:....x..x:...:..x:.. 11M2D134M 109/145 75.2% 145/94230402 0.0% 2/145 1.4% 92285710 NA +3016 chr4 + 190214555 127723590 127723589 127723660 71 TAGGATATATATATGTGTGTGTGTGTATATATATGTATTTTTTAAACTATTTGTCAACTTTATTTTTTTTT chr4 + 94230402 33250990 33250989 33251060 33250990 33250989 33251060 71 TAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTT ....:.x.x.x.x...................:.....x.x.x:.::.x..xx.::x:......x...... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 94472600 NA +3382 chr4 + 190214555 127724289 127724288 127724362 74 GTGCACCTGTAATCCTAGCTACCTAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.:......:.:::........x.xx.x...x.:...........:.:x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 51691085 NA +3521 chr4 + 190214555 127725167 127725166 127725249 83 CATGGTGGCAGGTGCCTGAAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x..x...:...........::........x.xx.x...x.............:.:x:xx:.....:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 51691970 NA +3169 chr4 + 190214555 127727389 127727388 127727455 67 TGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGAATTACATGAGCCCAGGAGTTCAAGGCTTCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.:.........::........x:xx.x...x:..x...:.....:..:.:x:....x:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 51694178 NA +6010 chr4 + 190214555 127744629 127744628 127744803 175 TAATACAA--TGTAGGTTTATGTATT-----TATATGTTTCCCTCTGTAGGTTTCTTCAGTTTTTGGCGTGGCAATTTGGCAAATGTTATTCGGTATTTTCCAACACAAGCTCTAAACTTTGCTTTTAAGGACAAATACAAGCAGCTATTCATGTCTGGAGTTAATAAA--GAAAAACAGGTAA chr4 + 94230402 35433499 35433498 35433682 35433499 35433498 35433682 184 TAATACAAACTGTGGATGTTTATTTTAAGGATCCATTTCTTTTTCTGTAGGATTTTTTCAGTTCTGGCATGGCAATCTGGTAAATGTTATAGACAGTTTTCCAACAGAGGATCTAAATTATGATGTCAAAGACAGGTCCAAACAGATTTTAATGTCCAAAGTGGATAAACTGGTAAATAAATAA ........--...:.:.x.x.:.x..-----.x:..x.:.:::........x..:..:x:x..:....:.......:...:.........xx:xx:..........x.:.x......:.x..x.x.:..:....::.x...:...x.x..x.....:::...x:.....--.:x...:.::... 8M2I16M5I138M2I13M 120/175 68.6% 184/94230402 0.0% 9/175 5.1% 92311130 NA +10677 chr4 + 190214555 127782114 127782113 127782714 601 GCCCCCGGATAGCTCAGCAGCCTCCATTTTCCAGATCTTTCTCGAACCCGCAGCTTCTTGGGCAGCCGTTGCCCGAGTGCTGACGGAAGCGGCCGAAGTCCGGGCCCGGAGCTGGCTCGGGCGCGGAGCGGAGGCTCGCGCGCCTCCCGGGCAGCCGAGCGCGCAGGCGCAGGTCCCAGTAACCGCCGGTTGGAGGCGGCCGAACCGCAGTAGGGAAAGACCCAGGCTGCGGGACGCGGTGCAGGCTGCGGCGCTGACGGCCTCTGCTCCTTCCGCGGGTTTCCGACTCCCTGCCCTAGATTTTCTGCTTAGCGACTTGGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGGTTCAGTACCAGCAGCCCGACCATCACGCGGCGGGATGTCTGTGGTTGGCATTGACCTCGGCTTTCTCAACTGCTACATTGCTGTCGCGAGAAGTGGCGGCATCGAGACCATCGCCAATGAGTACAGCGACAGGTGTACCCCGTAAGT------GCCTCTGCTGAGCATCACCTCGACCCTAAGAAACGTTTTTCTCTCCCGTCC chr4 + 94230402 35438372 35438371 35438802 35438372 35438371 35438802 431 GCGCTCTGGTGACACCGCCTCCCGCCGTTTCCAGATCTTTCTGGAATgcgcggcgcccgccgcccgcgcggcccgAGCCCTTCCGGAAACTGCCGAAGCCGGAGCC-------------GGCGCCCGGCGGAC-------TGCCCGCCGGCCGGCACAGCGCGCCTGCGCAGAGGCGAGCAGCCGCCGGTTGGTGGCTGGTGCTCCGCAGTGGGGAA------------------------------GAGGCGGCGGCGGCC-------------------------------------------------------------------------------------------GGTCCCAGCAGC---------GCAGCGGTCGCAG-------GCCGGCGGG-----------------GAGCACCCAGCGCAGTCATGTCTGTGGTCGGCATCGACCTCGGCTTCCTGAACTGCTACATCGGCGTGGCGCGGAGCGGCGGCATCGAGACCATCGCCAACGAGTACAGCGACCGCTGCACCCCGTGAGTAGCGGCGCTCCCGCGCTGCCCTCCCTCGGGCCGCAG--CCGCCTTTCTcccccggcc ..x.:.x.:.::.x.x..xx..:x.xx...............x...:x...:..x:.:xxx..xxx..:x.......:x..xx.....:.x.......:.x.:...-------------.....xx:.....x-------:...:x....x.:..xx.......xx......:xx.x..:.:...........x...x.x:.xx.......:.....------------------------------.x....x:.:.....-------------------------------------------------------------------------------------------::..........---------.x..x..x.:.:.-------:...:x...-----------------..x..:.xx...xx.xx...........:.....:...........:..x...........:.x:..x...x.:..:.......................:............x.x..:.......:...------..::.:..xxx..x::x.....:x..xx..--x..::......:....x.. 106M13D14M7D77M30D15M91D12M9D13M7D9M17D130M6I30M2D19M 304/425 71.5% 431/94230402 0.0% 182/425 42.8% 92343742 NA +5095 chr4 + 190214555 127794059 127794058 127794140 82 TTTGTTTTTCTGGTTTAGGGCCTGTATATCATTGGGATCAAGAACTCGAGCCATTGGAAATGCAGCAAAGAGCCAGGTAAAT chr4 + 94230402 35442962 35442961 35443043 35442962 35442961 35443043 82 TTTCTCTTTTTTACTTAGAGCATGTATATCTCTAGGATCCAAGACACGGGCCATTGGGAATGCAGCAAAGAGCCAGGTAAAT ...x.:...:.x::....:..x........x:.:.....x.::..x..:........:........................ 82M 65/82 79.3% 82/94230402 0.0% 0/82 0.0% 92351097 NA +9668 chr4 + 190214555 127795717 127795716 127795915 199 TATTTTGCATTTATTAGGTAACTGATAAATACAAGTGTTTACTGCCAACAGATAGTCACGAACGTAAGAAATACAATTCATGGCTTCAAAAAGCTTCATGGGCGATCATTTGATGATCCCATTGTGCAAACTGAAAGGATCAGGCTTCCCTATGAACTGCAGAAAATGCCTAATGGAAGTGCAGGAGTTAAGGTAAGCT chr4 + 94230402 35444428 35444427 35444620 35444428 35444427 35444620 193 TAGTCTGCATGTAAGAGGTAACTGA-AAATAGAA-----TATCTTCCACAGATTGTTACAAATGTAAAAAATACATTGCATGGCTTCAAAAAGCTGCATGGAAGAGCATTTGAGGATTCTTACATACAAGCTGAAAGGGCCAAACTTCCCTACGAACTTCAGAAGATGCCGAATGGCTCTGTAGGAGTAAAGGTAAGTT ..x.:.....x..xx..........-.....x..-----..::x:.x......x..:..:..:....:.......x.x.................x.....:x..x.......x...:.:xx::.:...:........::..::........:.....x.....:.....x.....xxx..:......x........:. 25M1D8M5D160M 148/193 76.7% 193/94230402 0.0% 6/193 3.1% 92351289 NA +9464 chr4 + 190214555 127798551 127798550 127798724 174 ATGACTCTTAATAAATATCCCAACTTTTGGTGTTAGGTGCGGTACTTAGAGGAAGAGAGACCTTTTGCAATTGAGCAAGTTACTGGAATGCTGTTAGCCAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTGATTTCAGTAAGTTTTACTTCA chr4 + 94230402 35445413 35445412 35445584 35445413 35445412 35445584 172 ATGATTTGTTATAGA-ATTGCAATTTGTCTT-TCAGGTGAGGTACCTGGATGAAGAGAGACTGTTTGCAGTGGAACAAATTACAGGAATGTTACTGGCCAAACTTAAAGAGACTTCAGAAAGTGCTCTGAAGAAACCAGTGGCAGACTGTGTTATTTCAGTAAGTTGTCATCCA ....:.:x.x...:.-..:x...:..x.xx.-.:.....x.....:.:..x..........:x......:.x..:...:....x......:.::.:.....:...................:....:................x........x.............x.xx.:.. 15M1D15M1D142M 136/172 79.1% 172/94230402 0.0% 2/172 1.2% 92353138 NA +7182 chr4 + 190214555 127801090 127801089 127801241 152 AAATGTTTACATAAAACATTATACTTAACTGTTGTTTTTAAATACTAGATTCCTAGCTTTTTTACTGATGCCGAGAGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGCTTAAATTGTTTAAGGTTGATGAATGAAACTACTGCAGGTGA chr4 + 94230402 35446807 35446806 35446955 35446807 35446806 35446955 149 AGAAGTCCATATGTGATATCCTATGTGATTGTTTCTTGGAAACA---GGTACCAAGTTTTTTCACTGACGCGGAGAGAAGGTCTGTAATGGCAGCTGCTCAGATTGCAGGATTAAATTGTCTGAAGCTAATGAATGAAACTACAGCAGGTAA .:.x..::.:..:x:.:..:x..:x.:.:....x:..xx...:.---.:.x..x..:.....:.....:..x........:.....:.....x..x..:...:.......x.........:.:.:.:.:..............x......:. 44M3D105M 108/149 72.5% 149/94230402 0.0% 3/149 2.0% 92354283 NA +9381 chr4 + 190214555 127801771 127801770 127801922 152 TTGTTCTTATACAGTTGCACTGGCGTATGGAATTTATAAACAGGATCTTCCCCCATTAGATGAGAAACCAAGAAATGTAGTATTTATTGATATGGGACATTCTGCCTATCAGGTCTTGGTTTGTGCTTTTAACAAAGGAAAACTTAAAGTAA chr4 + 94230402 35448621 35448620 35448772 35448621 35448620 35448772 152 TTGTTCTTTTCCAGTTGCACTAGCCTATGGGATATACAAGCAAGATCTTCCAGCCTTGGAAGAGAAGCCAAGGAATGTGGTCTTCGTAGATATGGGGCATTCTGCGTATCAGGTTTCAATCTGTGCTTTTAACAAGGGAAAACTGAAGGTAA ........x.x..........:..x.....:..x..:..:..:........xx.x..:..x.....:.....:.....:..x..::.x........:........x........:.:::.:..............:........x..:.... 152M 121/152 79.6% 152/94230402 0.0% 0/152 0.0% 92353150 NA +22010 chr4 + 190214555 127803608 127803607 127804100 493 TCTGCTTTTTCAATT--AAACAGGTCTTGGCTACTACCTTTGATCCATATTTGGGTGGCAGGAACTTTGATGAGGCTTTAGTAGACTACTTCTGTGATGAGTTCAAGACCAAATATAAGATAAATGTGAAAGAAAACTCTCGGGCCTTGTTGCGTTTATATCAGGAATGTGAAAAACTAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTCCATTGAACATTGAGTGTTTCATGAATGACCTTGATGTTTCTAGTAAAATGAACAGGTACC--ACGTATGTTTTTAGTTTGAAAAGTGTTTACTTATTTTATAATGTTTAGATCACGTCTGATTTGTTTGTTGTTTTAGAAGATACGCTCAACTTTTAATCCCAGAATAATGAATTTTATTCTATTTTCTCACAGGGCTCAATTTGAACAACTGTGTGCTTCCCTTTTGGCCAGGGTTGAACCACCTTTAAAAGCAGTAATGGAACAAGCTAGTAAGTGGAAATT chr4 + 94230402 35449613 35449612 35450057 35449613 35449612 35450057 445 TTTGTTTTTTCACTTCTATGCAGGTCTTAGCTACTACCTTTGACCCTTTCTTAGGCGGCAGGAATTTTGATGAGGCTTTGGTAGACTACTTCTCTGAAGAATTTAGGACAAAATACAAACTGAATGTAAAAGAGAATCCCCGAGCGCTGCTCAGATTGTATCAGGAATGTGAAAAACTAAAGAAGCTTATGAGTGCAAATGCTTCTGACCTTCCACTGAATATAGAGTGCTTCATGAATGACCTTGATGTCTCCAGTAAGATGAACAGGTACTGGACGT-TATTTTCACT----GAAGTGT---------------------GATCAGACGTAGCATCTCAGCTGT------------------CTTGTAAT------ATAAAGCATTTT-CTCTG-TTCCTGACAGAGCTCAGTTTGAGCAGTTGTGTGCTGCCCTTCTGTCCAGAGTGGAGCCTCCTCTAAGAGCAGCCATGGAACAAGCTAGTAAGTAGGAGCT .:..:.......x..--.x:........:..............:..x.x:..:..:........:..............:.............x...x..:..:.:...x.....:..:x.:.....:.....:..::.:..:..x:..:.xx.x..:.............................x..............x..x..:......:....:..x.....:....................:..:.....:............:--....-.:....:.x.----:......---------------------.....x::x.:::x.x.:x.:...------------------...x....------....x.x.....-:...:-..:..x....:.....:.....:..::........x.....:..x....:..x..:..x...:...:.....:x...................:.:.::. 15M2I256M2I4M1D10M4D7M21D24M18D8M6D12M1D5M1D100M 349/441 79.1% 445/94230402 0.0% 56/441 12.7% 92353995 NA +12861 chr4 + 190214555 127805065 127805064 127805802 738 TTTTCCAGACTTACAACGTGAAGACATTAGTAGTATAGAAATTGTAGGAGGAGCAACACGAATTCCTGCAGTGAAAGAACAAATCACTAAATTCTTTCTTAAAGACATAAGTACCACATTAAATGCTGATGAAGCTGTTGCAAGAGGATGTGCGTTACAGGTATAATTGT----------TATTTTATTTTTTAGAATATGTATT-------------TTGCCAGAAATGA----------GTGATAGATCCAAAGGGGCCTTTTAATGTTATCTGTTCCATCCACTTATCAATAAGC----TAAAGTAAATTGAAGTTATTTCTGATAAATAAGTCTTATGTCTTTCCCATTTATGTTTTTAAGCTATAATAGGACAGTGTGTCTGTAAGGACACTGAAAGAATATTAATTTTACAAATTATTGCAGTCTGCCCATTTAAAATCCCTTTTGGAGATGTAAAGATAT-TCTGTTAATTTTTATAAGG----------TCACATAAAGAGTA-------------CTCAGGCCCTTTTAAATTTTCACTTCTCATTGCCAAAAACCAGTAACTTTT------AAAATGTAACAGTTGTAATAGGAGGACTCTAT--------TAAGCAGTTCAATCAGAGTAACCTAGGGTA-TGTTTTGTATTTGTTGATTTAAATATGGTATACATCTTA-------TTTTCAGTGTGCGATTCTCTCACCAGCATTTAAAGTGCGTGAATTTTCCATAACAGACCTTGTTCCCTATTCAATCACATTAAGGTGGAAGACCTCTTTTGAAGATGGAAGTGGGTAAGTTAT chr4 + 94230402 35451246 35451245 35452027 35451246 35451245 35452027 782 TCTTCTAGAACTTCAGCGGGAAGATATCTACAGTATAGAAATAGTCGGTGGGGCTACTAGAATTCCAGCAGTGAAGGAACAGATCTCTAGCTTTTTCTGTAAAGAAATAAGCACCACACTAAATGCTGACGAAGCTGTTGCAAGAGGCTGTGCCTTGCAGGTATGGATATTGAAATTCAGTACTGCTCTTTTCACGTGATGTACTACTACAGTGTAACTAATCAAAACCAAACGTCACTATGGGATGGAAGAAGATGGGCTCTTACTTGCT---TATTTGAACAGCTGGTGACAGACCACATCAGAATAGATTG-TGCTACGTTTGGTAA------CTTGTCACTGTCACATT------------------AAAGGGAATGATCTTGTTAAGAGACCTGTTGAATTTGACTGTCTGAATTTACTG--ATCCGCTTCTGTGTAAGTCATTTGTAAGATTTGATTGTATCTTTACTGATGATGACCAGGGAAATGGCGTTCATGTAATTAATGAATTTGCTTTAATTGCAAGTCAGTTCAA----TTAATTATC--TACCAAGAGTAAGAAGTTTCTATTTAAAAAATG---CTGTGGTAAGCTGGACCCTCCATGTGACCTGTATGCACTTAGATATTAATGAATTGCTGTATTGCTATTTATTTTACTACATGGATATATTAAAATTCTGATCTTTCTTTTCTAGTGTGCAATTCTTTCCCCAGCTTTTAAAGTGCGGGAATTTTCCATCACTGATGTTGTTCCATATTCCATTACATTGAGATGGAAATCATCTTATGAAGAAGGAACAGGGTAAGTTGT .:...:...x:.x..:..x.....:..:x::...........x..x..x..:..x..xx.......x........:.....:...x...:x..:..::x......x.....:......:..........:.................x.....x..:.......::x.:.----------..:.x:x:....:.x:xx.....:.-------------.x::..:..x::.----------.x...:..xxx.:.x....::..xxx..:.---.:..:x.x.x:..x:.x.xx:.x.----:.:.:..:....-x.:..:x.:..:...------...:.xx..x..x....------------------x.:.:x.:..xx::...x.:..x..:x:xx....x.x.x.x.:xx..x...:..--:..:..::x.x.:x..x:.x...xx:....x.:.xx:...-.:.::.:..xx.x.:x...----------...::...xx.:.:-------------:x..:.:.xx..:..----.:.x..x..--.:....:.::x..x.::..:.------......---.x..x....xxx.::xx...:..--------..x...x..x:..xxx.:.:.x:.:xx...-..:.x.x.....xx:x.:x.::....:x..x.xx...x.-------...::.......:.....:..x.....x...........x...........x..x..:x.......x.....x..:.....:..:.....:x.x....x......x....xx.........:. 170M10I25M13I13M10I30M3D24M4I12M1D15M6D17M18D54M2D40M1I19M10I14M13I15M4D9M2D21M6I6M3D23M8I30M1I39M7I123M 456/699 65.2% 782/94230402 0.0% 122/699 17.5% 92353819 NA +9774 chr4 + 190214555 127807993 127807992 127808135 143 TAGGGAATGTGAAGTTTTCTGTAAGAACCATCCTGCCCCATTCTCAAAAGTCATTACTTTCCACAAGAAGGAACCATTTGAACTAGAAGCATTTTATACTAATTTACATGAAGTGCCTTATCCTGATGCAAGAATTGGTAAGA chr4 + 94230402 35452395 35452394 35452537 35452395 35452394 35452537 143 TAGGGAATGTGAAGTCTTCAGTAAGAACCATGCTGCTCCATTCTCAAAAGTAATTACTTTTCACAAGAAAGAGCCTTTTGACCTGGAAGCTTTCTACACCCATCCTCATGAAGTGCCTTATCCTGATTCCAGAATAGGTAAGA ...............:...x...........x....:..............x........:........:..:..x.....x..:.....x..:..:..:x..::x.....................x.x.....x....... 143M 121/143 84.6% 143/94230402 0.0% 0/143 0.0% 92355598 NA +10890 chr4 + 190214555 127811425 127811424 127811645 221 TTTTTCCTTAAGGGAGCTTCACTATTCAGAATGTTTTTCCACAGTCTGATGGTGATAGTTCCAAAGTGAAGGTTAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAAAATTTGGAAGGCGATCACAGTGATGCTCCAATGGAGACAGAAACTTCATTTAAAAATGAAAACA---AAGATAATATGGTATGTAGA chr4 + 94230402 35453639 35453638 35453862 35453639 35453638 35453862 224 ttttttcttCAGGGCGTTTCACTATTCAAAATGTTGGTCCCCAGCACGATGGCGACAACTCCAAAGTGAAGGTTAAAGTGCGTGTCAATATTCATGGCCTTTTCAGCGTGGCTAATGCTTCTATAATAGAAAAGCAGAACATTGACGGAGATCACAATGACGCAGCGATGGATACTGAGTCATCAAGTAAGAACCAAGGCAGAGAAGATGAGCTGGTATGTAAA .....:...x....x.:...........:......xx...x...:x:.....:..:.::....................x.....:..:..:.....xx.:.....:.......::..x..x:....x..:.....:..:x.x..x..x.......:...:..xx.:.....x..x..:x.x...xx...:..:x..::..---.....:.xx.........:. 201M3I20M 164/221 74.2% 224/94230402 0.0% 3/221 1.4% 92357786 NA +6011 chr4 + 190214555 127818266 127818265 127818425 160 CATTTTTAAAACAAAAAAAAGACACTGCGTATATTATCAATTATGTA-TTTTCTTTCTAGGATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAACA------CACTCCAGAAGAGGAAATTGATCATACAGGAGCCAAAACAAAGGTTTG chr4 + 94230402 35455977 35455976 35456138 35455977 35455976 35456138 162 CAGTCCTAAATCATACCACAAAC-CTGTGCAT----TCTGTTATGCAACTCTTTCTCTAGGATAAAATGCAGGTTGATCAAGATGAAGGTGTTCAGAAAAGTCAGGCTGAACAGCAGAGCCAAGCAGACGAGGAAGCCGAAAATACAGGAATTGAAACAAAGGTTTG ..x.::....x..x.xx.x.:..-...:.:..----..x:.....:.-:.:.:.:............................x.....xxx...:...x....x........------.xxxx....x......:::..xx........::::............. 23M1D8M4D11M1I65M6I48M 116/155 74.8% 162/94230402 0.0% 12/155 7.7% 92362289 NA +6583 chr4 + 190214555 127820439 127820438 127820687 249 AGACAAACAAGACCGATTAAATCAGACACTTAAAAAAGGAAAAGTCAAAAGTATTGATCTACCGATCCAGAGTAGCCTATGTAGACAACTAGGCCAAGATCTTCTCAACAGCTACATTGAAAATGAGGTATGTAAATCTGAGTTGATGCTGAAATAGGTGGTAGTTTATTCTGAAATTTTGTAGAAGTCAATGATTATCTC-----CAAAATTTAGGGCACTAGTTTATAA-CTCCTAAGGAATTATATTAAGTA chr4 + 94230402 35456662 35456661 35456896 35456662 35456661 35456896 235 AGACAAGCAAGATCATCCAACCCTGCCAAGGGCTAAAACAAAAGTTAAGAGTATTGACCTACCTATCCAGGCAAGCCTCTATAGGCAACTGGGACAAGATCTTATCAACTGTTATATAGAAAATGAGGTA-------------AGAAGCACAAAGAGGTGATGATTCAAATTAACATC-------AATAAATGATTACTTTGTGTGCACAACCATAAACATTACCTTAGAATTTCTTGAGGCTTTGTCTTCAGTA ......:.....:.:x::..x:.x.x..xxx:xx...:x......:..:........:.....x......:xx.....x.:...:.....:..x.........x.....x.:..:..x............-------------x..x..xx...x.....:.::..:.xx:.:.x..:-------.:.x........::.:-----..x..::xx:::..:..x:...x..-:..:.:...xx..:.x..x.... 130M13D35M7D16M5I25M1I23M 154/229 67.2% 235/94230402 0.0% 26/229 11.4% 92363777 NA +10985 chr4 + 190214555 127822766 127822765 127823627 862 TAGGGGAAGATGATCATGCAAGATAAGTTAGAGAAAGAAAGAAATGATGCTAAGAATGCCGTTGAAGAATATGTATATGATTTTAGAGACAGGCTGGGCACTGTCTATGAAAAATTCATCACTCCAGAAGTAAGTCTAAATTCTGT------------------TAATTTTT-----------TGTGAGGACTATTTAAAG--------------------GTTTACTCGAGAATGCTA---GTACAAATTACATAAATAAATGTACCAA------ATGTTGTTATT---GTTGCCAAT--------CTTGGGCCCATATGGGGAAGGTTCTTAT-------------TTTTACAAGTTGCAGA-AGTATGGTGAAAAACAT--------ATTTTTGAATAAGAAGTTAGAAAATTTTGAAATTTAATATTTTATACTTGAAAAACATTCTGTCCTTCCATGATTTTTAATTTTTTTTTTATTTATTTATTTGAGACAGCATCTAGCTCTGTCGCCCAGGCTGGAGTGCAGTG-------------GCACGATTTCAGCTCACTGCAACTTCTACTTCCCGGGCTCAAGCAGTCCTCTCACCTCACCCTCATAAGTAGATGGGAATACAGGCACATGCCATCATGCCTGGCTAATTTTTTAATTTGTTGTAGAAATATGATTTTGCCATATTGCCCAGGCTGGTCTCTTAGTTCTGGGCTCAAGCGATCCTCCCACCTTGGC-CTTTCAAAGTGTTGGGATTACAGGCATGAGGCACTGCACTGCACTGAGCCCAATGATGACTTTTATTTCTAAGGAAAGTATTTTTAATT---AGTGTCTCTCAAATATATTACTAGGACTTGAGTAAACTGTCTGCAGTATTGGAAGACACAGAAAATTGGCTTTATGAAGACGGAGAGGACCAACCTAAACAAGTTTATGTGGATAAGCTTCAAGAACTAAAGGTA chr4 + 94230402 35457652 35457651 35458515 35457652 35457651 35458515 864 TAGGGGAAAATGATGATGCAAGACAAGCTTGAGAAAGAAAGGAATGATGCTAAGAATGCTGTTGAAGAATATGTGTATGACTTCAGAGACAAACTGTGTGGAGTCTTTGAGAAATTCATCACTGAAGAAGTAAGACTCACTTCTGTGTTCCAGCTGTTGGAAAATGATTTTTCTGACAAGAGCTTTGAGTGATATCTGTGGAAGCTGCAGGAGTCTGTTGAACTTATCTCAGAATGTGAAATGAATTGACTTCAGAAGTGAAGTTAACTATGCATCAGCTTGGTATTTGAATTGCAAATACAATGAATTCTGTGCTGTCT-GAGAAGTTTCTCAGTGTCAAGAAAGGATTTCACA---TGTAGACAGAATGGTGAGAGAGATCCATGAGCATGGCTGGGTAGGAAG-AAGAAAAT-------------------GAGCAGAAAAATA---AGTGCTTATAGGTCTGTTCTATTATCTGTAATTTATGTATTGAAAA----ATATGGTTCCTTC-CCCACTTAAAAGTGTGGTGAACCTGGTGTGTTGCTGAAGCCCAGGTAAAAGAGAAAGCTGTACACTGGGCTTTTGCAA--------------------AAGCAGAATTGGAAGAAAACTTCTGTAATAATTTCTAA---------TGGCTGTCTGTGGAAGTGTG---------TGGTACACAGGC---------AACAACTGGCTGAAACAGCCCTTCAGCAGCAGCGGTTTTAAAGTCT----ACTCCATGGATTACGTGGT------TACTCGGC------AACACATTTTGTTCT----------TTGCTAATTAACAGTGTCTCTGACTTGCTTCA-TAGGATACAAACAAGCTGACCTTGATGTTGGAAGACACAGAAAACTGGCTTTATGAAGATGGAGAGGACCAGCCAAAGCAAGTGTATATGGATAAGCTTCAGGAGCTAAGAGTA ........:.....x........:...:.x...........:.................:..............:.....:..:.......::...x.::xx....x...:............xx.........x..x.x......------------------.:......-----------.x....x:x...:.:x:.--------------------::...:::x......:x.---.x.:x:.:.x..x..:.:..xx..x.x.------.xx...x....---:....x...--------:.:x.xx.::.x.-.:....x....:.x-------------...:...---..:...-..x.......:.:.x..--------..xx:..::..:....-x.......-------------------x.x:x......:.---x..x...x:.x.x:.x..xxx..x.:.x.x......x....x:.:.----..x.:.:..:x..-....xx:x::....::...-------------..xx:.x::...x.x.xx.x:.xxx..::x:x.:.....:xx...:--------------------...:...xxx.:.x:x.::.x:x..:x..x..x:..::---------.:::.xx:...:...:.:..---------.:x.:.x.....---------.::xx:x....x..:.:::...:.x:.xx::..-x...:.....x.----.:.x..x.x..x.x.::x.------:...x:..------.xx..x...xx....----------..x:.....---.........x.xx.::x.:.-.....:x::.::..:...x.:x:::.:.................:..............:...........:..x..:.....x...:.............:..:....::... 146M18I8M11I18M20I18M3I28M6I11M3I9M8I13M1D14M13I7M3D6M1I17M8I16M1D8M19D13M3D46M4D13M1D19M13I46M20D38M9D20M9D12M9D33M1I12M4D19M6D8M6D15M10D9M3I20M1D114M 505/756 66.8% 864/94230402 0.0% 214/756 28.3% 92365114 NA +8229 chr4 + 190214555 127827293 127827292 127827427 135 TTATGTTAACAGAAATACGGCCAGCCTATTCAAATGAAGTACATGGAGCATGAAGAGAGACCAAAAGCCTTAAATGACTTGGGAAAAAAGATCCAACTTGTCATGAAAGTGATAGAAGCTTATAGAAACAAGGTA chr4 + 94230402 35459633 35459632 35459767 35459633 35459632 35459767 135 TTATGTTTCCAGAAATTTGGACAGCCTATTCAGGAAAGATACATGGAACATGAAGAGAGACCAAAAGTTTTAAATGAACTGGGGAAGAAGATTCAGCTCCTTATGAAAGCAGTAGAAGCATACAAAAATAAGGTA .......xx.......x:..x...........::x:.::........:...................::........x:....:..:.....:..:..:x.:.......:::.......x..:.:...:...... 135M 105/135 77.8% 135/94230402 0.0% 0/135 0.0% 92367660 NA +12317 chr4 + 190214555 127830617 127830616 127830809 193 AAGCTTTTTTTTTTTAAATAGGATGAAAGATATGATCATCTGGATCCTACTGAAATGGAAAAGGTTGAAAAATGTATCAGTGATGCCATGAGTTGGCTGAATAGTAAGATGAATGCACAGAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAAGTCAAAGGTAAGAAGTT chr4 + 94230402 35460299 35460298 35460488 35460299 35460298 35460488 190 AAACATCTTTCTCCT---TAGGATGAAAAATATGATCACCTAGATCCTGCTGAGATGGAAAAAGTTGAAAAATACATCAGTGAGGCTATGAACTGGTTGAACACCAAAATGAATGCACAGAACAAACTAAGTCTAACTCAAGATCCCGTTGTCAAAGTGGCAGAAATAATATCAAAATCAAAGGTAAAAAATT ..:.x.:...:.::.---..........:.........:..:......:....:........:..........::........x..:....::...:....:.x:..:..........................x...........:..x..x.....xx........:..x....:..........:..:.. 15M3D175M 156/190 82.1% 190/94230402 0.0% 3/190 1.6% 92370318 NA +3251 chr4 + 190214555 127831361 127831360 127831443 83 CGTGGTAGTGCATATCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGCTCCCTTGAGCCCAGGAATTTGAGGCAGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..:.....::.--.....:.........::::........x.xx.x.:xx.x.....:.....:.::..x:...x.... 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 51798164 NA +35575 chr4 + 190214555 127832658 127832657 127833446 789 ATAATCAATTTCTTCATGTCT-------TTAGGAACTGGATAATTTCTGTAACCCCATCATTTACAAGCCCAAACCAAAAGCAGAAGTTCCTGAAGACAAAC---CAAAAGCTAATAGTGAACACAATGGCCCAATGGATGGACAGAGTGGAACTGAAACTAAATCAGATTCAACAAAAGACAGCTCACAGCATACTAAATCCTCTGGAGAGATGGAAGTGGACTAAGTCTTAATTTTACCTTCACATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA--CTTTTGTCATTTGTTTTTTGGAGTAGTTTTGAAAAGTGTTTTATATTGAGTGCACTTC---TGTTCATTTCCAT---TGCTGCTTATATGCAGTGTTAGCCGAAT-TAGATT-TACAAGACAATCTAAGCTTTCCGGATA-ATTTTATATATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGCTTCTACTG-GGATAAACCTCAATTCCTTTATTCAGGAAAGGATACTTTATTGCATTATTGTTGCAGAAGCATAGATTTAATTGCATCTTTATTTTGAAAAACAAATGAAAATTGATGGGGTTTAAAGCTACA----------GAGGCACTGACCTTTTTCTAGTTATTGTATTGCTACAATTTAAATATTAAAACAAATAAGAGCTTTCTCAACAAATTAGTCCATCTCATTGATGTACCACAGAAATCCAAAGCTTTGCTGTCATCACATAAATGAATTAAATCACA chr4 + 94230402 35460863 35460862 35461642 35460863 35460862 35461642 780 ATAACTTGTTCTCTCACTTCTGTTACGACTAGGAGTTGGATAGCTTCTGTAATCCTATTATATACAAGCCCAAACCGAAGATAGAACCTCCCAATGATGGGCAGTCAAAAGCTAATGGTGAACATAATGGACCAGTGAATGGACAGAGCAGTACTGAAACAGGACCTGATCCGGCGAAGGACAATTCTCAGCAGACCAAACCATCTGGAGAAATGGAAGTGGACTAAATC------TTGCATTTCTGTTACTTAAAATAGTG--------CACAGGGTCCATTCTTT-----TGGTACACACCTCAGATGTTCAGTTATTCTTAGCCAACCTTCTGTCATTTGTTGCT--GAGTAGTTTTG-GAAGTGTTTCATATTAAGTACACCTCTGATGTTCATTTCCACTGATGCTGCTTATGTGGAGCTTTAGCCAAATGTAGATTGTATAAGTCAGTTTAAGCTTTCCCAATATATTTTATAT-CAAAACATACAGAATTGATATATAAATGGCAACAATCTACCTTATTTAAAGCTTTTATTGTGGATAAACCTCAGCTCCTTTATTCAGGAAAGGATACTGTATTGCACTACTGATGCTCAAGTGTAGATCTAATTGCATCTTTATTTTGGAAAA-ATATTGGAATTGAAGTG-------GCAACACTTGTCACTTGAAGCACTGACC-TTTTCTAGTTATTGTATTGttataatttaaatattaaaat-----aGAGGTTAGTTGGCATACTAGTCCATCTTGTTGATGTACCATGAAAATTGTATGGTCTCTT----TCATATAAACTAATACAAGCATA ....::x:..:::...:x...-------:.....::......::........:..:..:..x..............:..:::....x:...::.x..::::.---...........:.......:.....x...:..:..........::.x........x::.:.x...:.::.:..:....::..x.....x..:...:.x........:...............:..------..:.x..:x::...x..x...:x...--------...:........::...-----..........xx....:.:......:......:...--...:...........x:.--...........-:........:.....:...:...:..---............:---..........:..x..:x......:...-......-..:...x..:.:..........x:...-.........-:x..........:..x....:...:x........:...................:..:..-............::.......................x.......:..:..x...xx...::.....:...................:....-.x..x::......x.x.-------..x...----------..:.........-...................:..:................:-----....x..xx.:::..x.:..........::...........:::....:xx.x.x.:.x:.----...:.....:x...xx..x..:. 21M7I74M3I125M6D26M8D17M5D36M2I18M2D11M1D26M3I13M3I28M1I6M1I27M1I9M1D60M1I92M1D17M7D6M10I12M1D40M5D61M4D23M 590/748 78.9% 780/94230402 0.0% 73/748 9.8% 92371795 NA +3166 chr4 + 190214555 127840090 127840089 127840163 74 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGTGGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.::........x:xx.x...xx:........::.:..x:xx:..:...:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 51806886 NA +3060 chr4 + 190214555 127843039 127843038 127843109 71 GCTTTTTAATATACTTTTTCCCATTGCATCTATCCCTATATATGTATGTGTGCATGTATGTACACATGTTA chr4 + 94230402 21110380 21110379 21110450 21110380 21110379 21110450 71 GCTCCTTACTTCACTCTGTCCCATCACACACTGCCTTACATGTGTGTGTATGTATATAAGCATACATGTTA ...::...x.x:...:.x......::..:x:xx..:..:..:...:...:..:..:..x.:.:........ 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 106732659 83481896 +3085 chr4 + 190214555 127846726 127846725 127846799 74 ACTCAAAGTACTCCAGCCTAGTGTGACACAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAATCAAAG chr4 + 94230402 18047906 18047905 18047979 18047906 18047905 18047979 74 ACACAAAACACTCTGCCTTAATGATGAACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAG ..x....::....::x.:..:..xx:x....x.x:.....x.:..xx............x........:::... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 109798820 80415735 +3203 chr4 + 190214555 127846765 127846764 127846830 66 TGTCTCAAAAAAAAAAAAAAAAAAAAAAATCAAAGTAGATTTTTACAGAAGTTCAATGAGATTCAA chr4 + 94230402 15009843 15009842 15009908 15009843 15009842 15009908 66 TGTCACAAAAAAAAAAAAAAAACAAGAAATCGAAAAAGACTTGATTTTAAACTCATTGAAATTCAA ....x.................x..:.....:..:x...:..xxx:xx..::...x...:...... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 112836922 77377633 +3002 chr4 + 190214555 127867222 127867221 127867272 51 GGGCAACAGAAGTGAAACTCTGTCTCAAAAAAACAAAACAAAACAAAAAAA chr4 + 94230402 53068436 53068435 53068486 53068436 53068435 53068486 51 GGGAAATGGAATGGGAATTCTGTGGAAAAAAAACAAAACAAAACAAAAAAA ...x..::...xx.:..:.....xxx......................... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 74798786 NA +3473 chr4 + 190214555 127874151 127874150 127874234 84 AAAATAAGATACACAGCCAAGCGCACCTCTAGTCCCAGCTACTTCGGAGGCTGAGGCAGGAGGTTCACTTGAGCCTAGGAGTTT chr4 + 94230402 76033186 76033185 76033267 76033186 76033185 76033267 82 AAAGGATGATACACAGT--GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ...:x.x.........:--:.:....x.x....:..........x::........x.xx.x.:xx.......:..:..:..:.. 17M2D65M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 51840965 NA +5251 chr4 + 190214555 127881829 127881828 127881931 103 AGGATTTTAAAGTTGGAAATCTGCTTGGTAAAGGATCATTTGCTGGTGTCTACAGAGCTGAGTCCATTCACACTGGTTTGGAAGTTGCAATCAAAATGGTAAG chr4 + 94230402 35481577 35481576 35481679 35481577 35481576 35481679 103 AGGACTTCAAGGTGGGGAACCTCCTGGGAAAGGGCTCCTTTGCCGGGGTCTACAGAGCGGTATCCCTGAAAACCGGCCTGGAAGTGGCTATCAAAATGGTAAG ....:..:..:..x..:..:..x..x..x..:..x..x.....:..x...........x.x:...x.xx.x..:..::.......x..x.............. 103M 77/103 74.8% 103/94230402 0.0% 0/103 0.0% 92400252 NA +16097 chr4 + 190214555 127883253 127883252 127883575 323 TATTTTTAGATAGATAAGAAAGCCATGTACAAAGCAGGAATGGTACAGAGAGTCCAAAATGAGGTGAAAATACATTGCCAATTGAAACATCCTTCTATCTTGGAGGTAAGATATAAAT-TTTGTAGAAGTGACCAAGGACACTGAATTTTTGTATA-----------TTTTAATTTATTATGCCCT---TTCACATTTCAGCTTTATAACTATTTTGAAGATAGCAATTATGTGTATCTGGTATTAGAAATGTGCCATAATGGAGAAATGAACAGGTATCTAAAGAATAGAGTGAAACCCTTCTCAGAAAATGAAGGTAGGTGTGTGGTTTTTTTTGT chr4 + 94230402 35482397 35482396 35482728 35482397 35482396 35482728 332 TATTTTCAGATAGACAAAAAAGCCATGCACAAAGTGGGAATGGTACAAAGGGTTCAGAACGAGGTGAAAATACATTGTCAGCTAAAGCATCCATCTATCCTTGAGGTAAGGTTCATGTATTTTTAGCAGTAACTGCATATG-TGGCTTGCTGTGTAGTCTGCAACTATTCTAATTTCCT-TGCTTTGTTTTTTTTTTTTAGCTTTATAACTATTTTGAAGATAGCAACTATGTGTACTTGATACTTGAAATGTGTCACAATGGTGAAATGAGCAGATACATAAAGAATAGAAAGAAACCCTTTTCAGAAGATGAAGGTGAGAAT----TTTTTTCTAT ......:.......:..:.........:......::...........:..:..:..:..:.................:..::.:..:.....x......:.x........:.x:.x:.-...x...x...:..::x:x.::-..:x..x:...:..-----------..:......x:.-...::.---..:x:x...:............................:........::..:..:.x........:..:.....x.......:...:..:x...........:x.........:......:........::.x:.----......:.:. 118M1I22M1D14M11I12M1D6M3I135M4D10M 245/317 77.3% 332/94230402 0.0% 21/317 6.6% 92400856 NA +53435 chr4 + 190214555 127885681 127885680 127886765 1085 AAATTCTCTTTTTTAAAATCCTAACAGCTCGACACTTCATGCACCAGATCATCACAGGGATGTTGTATCTTCATTCTCATGGTATACTACACCGGGACCTCACACTTTCTAACCTCCTACTGACTCGTAATATGAACATCAAGATTGCTGATTTTGGGCTGGCAACTCAACTGAAAATGCCACATGAAAAGCACTATACATTATGTGGAACTCCTAACTACATTTCACCAGAAATTGCCACTCGAAGTGCACATGGCCTTGAATCTGATGTTTGGTCCCTGGGCTGTATGTTTTATACATTACTTATCGGGAGACCACCCTTCGACACTGACACAGTCAAGAACACATTAAATAAAGTAGTATTGGCAGATTATGAAATGCCATCTTTTTTGTCAATAGAGGCCAAGGACCTTATTCACCAGTTACTTCGTAGAAATCCAGCAGATCGTTTAAGTCTGTCTTCAGTATTGGACCATCCTTTTATGTCCCGAAATTCTTCAACAAAAAGTAAAGATTTAGGAACTGTGGAAGACTCAATTGATAGTGGGCATGCCACAATTTCTACTGCAATTACAGCTTCTTCCAGTACCAGTATAAGTGGTAGTTTATTTGACAAAAGAAGACTTTTGATTGGTCAGCCACTCCCAAATAAAATGACTGTATTTCCAAAGAATAAAAGTTCAACTGATTTTTCTTCTTCAGGAGATGGAAACAGTTTTTATACTCAGTGGGGAAATC------AAGAAACCAGTAATAGTGGAAGGGGAAGAGTAATTCAAGATGCAGAAGAAAGGCCACATTCTCGATACCTTCGTAGAGCTTATTCCTCTGATAGATCTGGCACTTCTAATAGTCAGTCTCAAGCAAAAACATATACAATGGAACGATGTCACTCAGCAGAAATGCTTTCAGTGTCCAAAAGATCAGGAGGAGGTGAAAATGAAGAGAGGTACTCACCCACAGACAACAATGCCAACATTTTTAACTTCTTTAAAGAAAAGACATCCAGTAGTTCTGGATCTTTTGAAAG------------ACCTGATAACAATCAAGCACTGTAAGAATAA------------------------------TTCTATCAGAGGCATTTTGTTTTTTGG chr4 + 94230402 35484584 35484583 35485710 35484584 35484583 35485710 1127 AAACATTTGTTCTTGTGCTTTTGACAGCCCGACACTTCTTGCATCAAATTATCACGGGTATGCTGTATCTTCATTCTCATGGAATACTGCATCGGGACCTCACCCTTTCCAATCTCTTACTCACCAGTAACATGAACGTCAAGATTGCTGATTTTGGACTAGCAACTCAGTTGAAAATGCCTCATGAAAAGCATTATACCATGTGTGGAACTCCTAATTACATTTCACCAGAGATAGCCACGAGGAGTCCACATGGACTTGAGTCTGATGTATGGTCTTTGGGCTGCATGTTTTACACTCTTCTTATTGGAAAGCCACCTTTTGACACCGACACGGTGAAGAACACGCTGAATAAAGTAGTATTAGCAGATTACGAAATGCCAGCCTTTTTGTCCAGAGAGGCACAAGACCTTATACATAAATTACTTCGCAAAAACCCAGCAGATCGTTTGAGTCTTTCCTCTGTGTTGGATCATCCTTTTATGTCCAGGTGTAGCTCTGCACGGAGCAAAGATTCAGGGACTTCAGAAGATTCCATGGACAGTGGAAATGCTACCATCTCTACCACTTTTACAGGCTCTTCCAGCATCAGTACCAGCGGCTGCTTGAAAGAAAAGAAGAAGCTGTTAGTGGGACAGCCGCTCCCAAATAAAATTACCTTTTTTCCTAAAAACAAGAATCCCAGTAATGCTTCATCT---GTAGATGGGAGTGGTTCTTTTCATCAGTGGGGAATTCAAGGGAAAGAAATGGGCACAAGTGGCAGGGGAAGAGTCATGCAACTTGCCGAAGAGAGACCACATTCCCGCTACCTCCGAAGAGCGCACTCCTCAGATAGGTCTGGCACATCGCACAGTCAGACTCAAGGAATATCAAATATTATGGAGAGGTGTCACTCCCTGGAACTGCTTTCCAAGCCTAGAGG---AGGAACGAGGGAAAACACAGAATGCTTTTCGCCTGCAAACAGCTATACTGACATGGGAGAAATATTTAAGGAAAAGACTTCTGGTAGTTCTGGTTCTTTTGAAGGGCAGATATCTCCACCTGTAAAAGACCAACCACAGTAAGAATGAGCTCTTATTATGATGAAATTTTGAGTTACCTTATGTTGGAAGCATTTTTTTTCTTGG ...:x:.:x..:..:x:x.::.:.....:.........x....:..:..:.....:..x...:...................x.....:..:...........x.....:..:...:....x..:x....:......:...................:..:........::..........x...........:.....xx.:..............:..............:..x.....xx.:...x.......x.....:........x.....::.......:........:..x:.x.....:..:.::.....:..:.....:.....:..x........::.:..............:........:.........x.:........x.x......xx.:........x..:x.:........:.:...:..............:.....x..:..x..:.....:...............x.:x:.xx:..x:..x::..:.......:...:...x::.....:..x..x..:.....:x....:..x..:.....::.xx......x:........:.:.....:x..:..:x.:..:xxx..x..:.::.::..x..::.x..x.....:..............x..:x.x.....x..:..:..:.:.:.x.x.:..x:...x...---.x......:.:::...:..x.xx...........x..------......:x:.:.xx.....x...........x..x...xx...x.....:..:........:..x.....:..x.....x:.:.....x.....:........x..xx.:......x......x..x.x..x...:x.....:x.:........xx::...x.......x:x.:.:.:.:.---....:x::.x.....::x...:x.x.x:..:..::..:...:.x..:.::....xxxx:.xx.x.....:........x..::..........x.........:.------------.....xx..x:.:...x...x........:.------------------------------..x.:.::..:.......x...:.... 698M3D37M6I181M3D105M12I31M30I27M 803/1079 74.4% 1127/94230402 0.0% 54/1079 5.0% 92401097 NA +3468 chr4 + 190214555 127887745 127887744 127887817 73 TGTACCTGTAGTCCCAGCTACTTGAGAAGCTGAGGCAGGAGGATTGCCTGAGCTCAGGAGTTCAAGGCCGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..x......:............:.:......x.xx.x.:.x::.:...:.:...:..:.:x:...:.:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 51854540 NA +14563 chr4 + 190214555 127889777 127889776 127892527 2751 AAATGCTATTACAATCAGAGTGACGTTATTTTGTGTCGACTTGTG-----TTTTTAGTTATTTACTAAATTGCTTCATTCTATGTATATTGTAGCTCATTTAAGAAAAACTA-----CTGAATATGACAGCATCAGCCCAAACCGGGACTTCCAGGGCCATCCAGATTTGCAGAAGGACACATCAAAAAATGCCTGGACTGATACAAAAGTCAAAAAGAACTCTGATGCTTC---TGATAATGCACATTCTGTAAAACAGCAAAATACCATGAAATATATGACTGCACTTCACAGTAAACCTGAGATAATCCAACAAGA---ATGTGTTTTTGGCTCAGATCCTCTTTCTGAACAGAGCAAGACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATCGTACATTAAGAAGCATTACATCTCCGTTGGTTGCTCACAGGTTAAAACCAATCAGACAGAAAACCAAAAAGGCTGTGGTATGTCTGTTATCTTCTTAAGTTACTAAATAACATTTTACTTGAGAATACAATTCTTGA-------GAACATATTTTTTAGTCCTCTGTAA---------TGTCCTTTTACT------------------TTGGGGTGTATACATGATCAACTTTATTAAAGAGAAAAGAGACTGGGTGTTTATGGAAAAACAGCTCTTATTTCCCTCTAT--------CTTCTTAATTATAGTGACATGATACTGGTAAGTTTTGAATTTTAAATTATTAATTTAAAGTAGATTTGAATGAAAAACATTTTAAAATAA---------TACTGGC----TATATGCTGGTTAAAGATTATTTTGTTCACAATTCCAATCAGTGAGCTAATATTATCCTTTGCTTCTA---TTTTTAT-TGTTTGTAAATTTAATCCCATCTCAAATT---TTAAAAAACTG---------GAAAATA---------------------------------TAACTTTTATTTTTTTAGCTTCTGGAACTAAAGAAAAGGCATATACACATTTAAGTTTAGAGTTTAAAAATTA----TTGTATGTGAATTGAGAATGGTGTGTGTTTTTTTAATTCTATCTTTATCCTGTTGTTTGTTCCCATTT------TACTTCCCATTTCATCCTTGCCTTTGTTTGGCTTGCTATTATCTTTTCAAAGTCCTTATTCTCCACTCTACCTTCTGTTTGCTTTCTGCTCATTGATTATCACTTCACACTTCATTATACATTCTTAACTTTGCACCATATGGTTCACAGTTGTGCTCAAATATACCTCTGATCTGGA-CTGTTGTAGTGAAGCAGCTTTGATTTTGACTTCAATATTTGTTTCTGCCATGGTTAAGTACTCCTAAGTATTATGTATGTCAGAGCTGTTCTAGTAA-------------ACAAAAGAATTATTACTGATTTTG---------------------------------GGTTTTTTTT----TTTTTTAGGTGAGCATACTTGATTCAGAGGAGGTGTGTGTGGAGCTTGTAAAGGAGTATGCATCTCAAGAATATGTGAAAGAAGTTCTTCAGATATCTAGTGATGGAAATACGGT-------------------AATGT--------GTAGTTACTTTATTACCTTGCAACTTCAAATTATCGTTTAAGCACGTTTAGCATTCTAATTCATTTTACAATG---------ATGTAAGTTTTT-TTAAAATCAGTTTGCCAGTATGATAGTGTCTCTGGAATTCAAA---AATTGAAATAGCATATTAAACATATTTAAATAAATTGGTGCAGTGTTAAAAATAATTATATCTAGTAAGAAAATCTAAACTTTTGGTTTAAGTTAAAAAGCAAAAAAATTACTTTTACAGAATATTTAACATTTTTCTATAAAATAATATTTAATGTTACATTTAAACACTTTGTATACGTTTTAGCAAGATATAGTACTGGAACTTAATGGCATGTAATTAGAATTTTAAAAAAATCTTTTGGCAGATCACTATTTATTATCCAAATGGTGGTAGAGGTTTTCCTCTTGCTGATAGACCACCCTCACCTACTGACAACATCAGTAGGTACAGCTTTGACAATTTACCAGGTA-TGTGA-ATTTAC----------CAGGGA----------------ATAAATTTTGATAGTAGATTT---------------ATATGTATATACGTAT-AAACTCTATATATAGATATAATAAATTATAAATAGCTTCAGTCAAACTTTAGGTCATATCATATTCTTGTACTT------------------TGTTTCTGGTGA-------------------GAGTTGTATGCCTTT-----AATGCAATGT-------------------------TTATTATTAATATTCTGTGTTATAATGGTA-----CTATATTCTATTTAAA-AACTAACTCTAGAACATTAGTCATATGTCTCACAAATGTAATTTGTA--------TACTTGTTTAGAATGTGGCTATAGTTATGTTAAAAAAAATTCAACATTGT-----GCTTGCTTCAGAGCACATATACTAAAGTTGGAATGTTACAGAGAACATGGCCCCTGTGACTCACAAATTTGTGAAGCA-----------TTCTGCATTTAAAAAATAATTCACCATGTATGTGGCTTTTGAGCTTTGAAATCAGT---------GCTGCTACATAAATGATTATTTATAATTATAGTTAACCAAATTTGACTCCC--AGTTTGGT-TTCTGGATATTATGGACTATGGACATAAGTACTGAATAGTAAGCCTTCATTGAGGTAACTCTTAGAAAAGAATAAGAAA---------ACCTGTCTAATGTAACCCTATTA----GAAATCACAATAAATAGATA-AAACTGTATGTCAG------------GTCAACACTTTCTTCCCTAATGTTAA-------------GTATTTTTTTTCCTTAGAAAAATACTGGCGAAAATATCAATATGCTTCCAGGTTTGTACAGCTTGTAAGATCTAAATCTCCCAAAATCACTTATTTTACAAGATATGCTAAATGCATTTTGATGGAGAATTCTCCTGGTGCTGATTTTGAGGTTTGGTTTTATGATGGTAAGTA-CCATTT chr4 + 94230402 35487903 35487902 35490800 35487903 35487902 35490800 2898 AAGAGTTTTTCAAAATATAGTAGCGTTATTTTTTTTTG-CTTACGAAGACTCTTTAAATCTCCAATGTTCTTCTTCA----ATGC---TTTCAGCTCAGCTGAGACCACCTGAAGACCTGACT--GGCAATGGTAATGCACACGGAGGCTTTCGGTATCATCTGGATGTGCAGCAAGATGCATCGAGAAATGGATGGAACACCTTAAAGGATATACGGAATCATGATGCATCCCATGATTGTTCACATTCTTTAAATCAGAGAAACCCAAACAAACATATATCCGAAGTTCTCTGCCAATCTGAAAAAGTTCCGTCATCTTCACGTGGCCTTTGGCCAG------CTTCAGAACAAAACCAAGCGTGGGGCAAAGAACCACC---GGCACATCAGAAACCTACGCTGCGAAGTGTAGTATCGCCTCTCAGTGCTTACAGGCTAAAACCAATCAGGCAAAAAACAAAAAATGCAGTGGTATGTAT-CCATTTTTTAAA---ACTGaataattaattaaatgaaatta-aataattaaaataGGTGAACATCTTTTAAAAATCACTTGAGAAATCAAACTTTTTTTTTCCTAAAAATCTATAGGTAAAGTTGGGTTATATGAAT------TTCTACTGCTGGTAATTTAGTTCAAAAATATCAGCAAGAATCATTGTAGTTTTTCTGAATATGGGATACTGCATCCTTGTGGCCACTT----CTAGCAAATACTGTGGCTG----CATTGCTTT----TAGCTTACAAGGAAAGAAACTACAAGAAGACATAAGAACTACTGACCACATATATATTCCCTACAGTTTCAAATATCTGCACTGCTTATCTGTGCGAG-----------TTGCATTTAAACTTTTGATGTGGTTGAAACACTAATACTTTTACAGATCAGGTCAATAAATGGATTAGATATGAAAATAGTCTTACTCTCCAGTGCTTGAATATTTTTTTCTTAAGTGCTGCTTTTTTCCTTTCTTG---TAAATGAGGGAGAAAAAAAAAATCAAGTTCCA---TTAATCCCTACCGGTTGTGTGAGTTTTCTGGTTGGTTGGTTGGTTGTTCCTGCTATCACTTTTCTGCCTTTTGTTCCATTTCCTGCAGTCTTGCTCATCTC-TCCT---CCCTCTTCCATTTCTTATTTTTTTTTAAGAGCATCATAGAGCTGACCTGTCTTGGTTTGGTTTGTCACTTAGGGA--GCCACGTCCTCCCTGACCAGG----------TTTGTGCCATGAAG--AAGCATTCTGTATTAGTATCGCTAAGAGTAAAAGTTAATGT-GAGAAGCATTTATCAGTTTG----CAGTAT--ATTCTAGAAATATTCTATTGCTTATA-----TTTCTAGGATAAAGCTGTGCTTATAGGACATCTGTGGGGAAAAAAAAACAGTTACTCAGCCTGCTAGAAAGTAAATGCGTTTGAGTTTAACTCGCTGGTTTTGTTTCAAATTTTCTAGGTGAGCATTCTAGATACTGGGGAGGTGTGTATGGAGTTTATAAAAGAACACCATTCACAAGAATTTGTGAAAGAAGTCCTCAGAATATCTTGTGATGGAAATACGGTGAGAATTTCTAGTTTATTTAATGTTACTCCACGTGCTTACTGTATTGTTTT----TTTTAAATTCTCATTTAAGCAGCTGTGTGCTGGGAAATGCTTTGTCAATGTATGTGCAGACATAAGCTCTCCTTTGCATCCATGCACTGCCATGACACAACCATATGAATTTGGACTTGACTTATAGAACA-GTGAAGCATTGTTGAA--AGCTGCTGCCATT----AAATAATCAC-TCAAAGGAGTAGAGC---------------AGTTAATTGTAAATTAAATTAATTAAACTG--TGCTTTAC----TTCCATGGGA-----------GTTGCA-------ACTGTAGATACGTTTTTTCC------------------------------------------------CTCTTTCGCAGATTGCGGTTTATCACCCGAATGAAGGAAGAGGCTTCCTTCTTGACGACAGGCCACCCATTCCTCCTGAAGACAGCTGTATGTATAATTTTGACAACTTGCCAGGTAATGTGACATTTATTTTTAAACAACAATGATTAATGTGATCCCTCAATGAATCTGGAGATTAGCTTTTACCCTCTGCTTCTCAGATAATCAGAAGGATGAAACTCCCTTCAGGAGAAGAGTCAA-----AGTGGTTTCACTGGAAACTT-------------TTCTGAAACTTGCTGAGAATGTAAACAAATGTTTTCAGTGACTTTTATGGAAATCACAATGAACTGCTTATCCTCTTTACAATGCAGTGTACTGAGCTTGAGATTTCTGTTTTTTTTATTATTATTATTC------ACATTGGAGACCATTTAAATTTGGTTTGAAGAAATATCAAGTGAACTTTAAATA-ATGTT----ATCTCTAATTTGCACATCCTAATACTTAGATAGCATGGGGTGAAGA--GGGGAAAAAGATATTTGAAAGCGTTGACAGATTATTTAA-----TATAAGCAAAAG------------AGCAAACATAAGC----TAACT-ATAAGTTCTTAAAAGACAATAAACTGCTCTTGTAATTGGAGAGCAA--AGTCAGGTTTCAG---CTGGAGCCATGAAGCCAGCTGGGCCATGATAGCTACTTAAATGAC-------ACATGCAGT-------ACTTCACTCTTTTACACTGATGTTCTGAAGTATTTTGATTGAAGAAACAGCTACTGAAGATGTATGCTTTTTTGAAAAAA----TAAAAAAAAGGTGGAAATTAAACTCAATTTCTTTCATGTTTGTCAACTACTGAAATATCACAGCATTCAGCTATAAAATACATATTTGAGCTAGTGCACAGTGAATAATCTG---ACAAATGATAAATGTTTTAAAATAGTGTTCTTCTGTTTTAGAAAAGTACTGGAAAAAGTACCAGTATGCAGCCAAGTTTGTGCAGTTAGTGAGAACAAAAACCCCCAAAGTCACATTCTACACAAGATATGCCAAGTGCATGTTGATGGAAAATTCACCTCCTGCAGATGTTGAAGTATGTTTTTATGATGGTACGTATTCATTT ..:x.:.x..xx..x:.x...::.........x.x.:.-...::.-----.:....:x.x.::.x.:xx:.x.....----...:---..x:......x:.:...xx.x..:-----....x.--.:..:::x:.::x..x..x.:.:...:.:.x::....::...x.....x.:..::....:.:.....xx....x::x:x:...:.x:.x.x:...::x......x..---....x:.x........x....x...x:...:x.x.xx...:....:x.:.x.x...x.x.:x..:....:.x.:.:.x::x.xx---.:...x::..x.x:...------:...x.....:.:.x.::.xx....:.x:..:.....---..xx:.......x.x...::.:x....::.x::...x..x:.x:x....:.....:.............:..:.....x.....x..x.........x.-::..:..:.x..---...:.....:xxx...xx...:.x..-...xx..:.-------......x....xx.:x:.x..xx.:---------.x.::....x..------------------.....x.:...:x..------:.:..:.:xx.:x..xxx..x:::::x:.x.xx.x..:..:x::.x.x:...::..xx..--------..x.x.xx..:.:.:x..x.----..:.:..:.x:..x:x:.x----:...:x...----...x..xx..x....:.x.:.x:..:.x:.---------.....:.----.....::.xx:..x..x..xxxx.:.:::..x.x.:x...x...x.xx-----------....x.:..---....x..-..x...x..xx:....x.:x.:x..:..:---.:..x...:x.---------.......---------------------------------...x.x:.::......xx:....x.---....x:.::.:x.x.x.x.x.x.:.....:x:---....xxx:..----....:..x.xx..xx.:x....xx..xxx..x..xx.x.....x:.x.:...::x........xx..:------.x:.x.:...:..-....---.::.x..:x::..x:....x.:....x.:..:x::xxxxxx.::x:..::...xxx..x.:..x:::..:.xx..--::...x..x:x.:.x.::.x:----------....::....:x:.--x.xx:..x..:x:x.:...xx..xx..x:x::.-:.:x...-.x......x:.x.x.x....----..:...--:..::x.xx..:x.:x.x.:..:x..-----.x.x..x.x:.:......x..x:..:-------------.x....:..:x:.....x.x::..---------------------------------......x...----....:...........x..x...x.x.:..........:.....:..:....:..::.:xxx..x.......x............:..:x::......x................-------------------.....--------..:x.....x....:::..----:..:.....x..:........xx.x.:xxx.xxx..x.xx...xx.....---------.::....:.:.:-..x:x...x:.x::.::x:....:.xx::.x:xx.....:::.---:.:.x.x.x.:..-:.x..:...xx..:..--.::..x...x:.x----.......:.:-..x.:x:..x.:.x.---------------......xx:xx..xx......x..xx..x.--.::..x..----...:..:::.-----------...:..-------...x.:x.........xx.x------------------------------------------------:::...x......::.x:.....:.:..:....:x..x.....:..:.:.....x:..:..:......x:x...x....x:...x.x...x...:.::........:..:.......-.....-.....:----------..:x..----------------..:...:.x..x.x...x...---------------.x..:xx:.x.x.x..-......:x.x:.x:::x.x.:.x..-----.:.:.:....x.x:..x:..-------------....x:x....------------------.....:::....-------------------..::..:x.::.:.:-----......:...-------------------------.........x.....------.:.x...x:-----:..x...:x:...:..-..x..x.xxxx....x...:x:.-....:----.xx.x.......:.--------.....:xx...x...x..:x.x::--:x.xx....:.x...::.x.x:..-----.x..::..x.-----:...x:.x....------------..x:.....::x.----.:...-.:..:..:x.:..:x.-----------.::..:.x..::.:.::..--x::..x..x.xx.---:.x....:x....::...:---------::x.....x.......:-------.xx.::...-------.:..x....::--.xx:..:.-.....:.xxx.x.x..:.:x:..x.:.:x.......x.xxx.xx...:x....::x..----..:....:.:xx:....---------.::.x.:.x....xxx:.x.:..----:.x......::.xx:..x..-...x.::..:.:x.------------..x..:.x.:.x---x.x....x...-------------..:..:..:.x::........:......x:...:..:..:.....xx...:......:...:.x..:...x.x...x.:......:....x.x:.x:...........:..:.....x........:.....x...xx...x...x....:..x..x.............x...-:..... 38M1D6M5I27M4D4M3D24M5I6M2D107M3I84M3I17M6D37M3D99M1D12M3D26M1D9M7I25M9I12M18I15M6D60M8I20M4D19M4D9M4D30M9I7M4I48M11D9M3I7M1I29M3I11M9I7M33I25M3D32M3D10M4I68M6I13M1D4M3D75M2D21M10D14M2D33M1I7M1D20M4D6M2D26M5D26M13I24M33I10M4I115M19I5M8I19M4D50M9I12M1I43M3I13M1D16M2D13M4D10M1D15M15D30M2D8M4D10M11D6M7D20M48D117M1I5M1I6M10I6M16I21M15I16M1I25M5D20M13D11M18I12M19I15M5I10M25I15M6D9M5I16M1I23M1D5M4D14M8I24M2D24M5I10M5D12M12D13M4D5M1D16M11I19M2D13M3D19M9I17M7D9M7D11M2I8M1I58M4D17M9I23M4I20M1I14M12I12M3D11M13I174M1I6M 1558/2484 62.7% 2898/94230402 0.0% 681/2484 27.4% 92401874 NA +4846 chr4 + 190214555 127893511 127893510 127893608 98 AGGGTCATCGTATTTGTTTAGCACTGGAATCCATAATTTCAGAAGAGGAAAGGAAAACTAGGAGTGCTCCCTTTTTCCCAATAATCATAGGAAGGTAA chr4 + 94230402 35492321 35492320 35492418 35492321 35492320 35492418 98 AGGGACATCGCATATGCCTTGCACTGGAATCTGCTATTCTGGAAGAAGAAAAAAGGAGCGAAAATGTTCCATTTTTTCCAATAATTGTTGGAAGGTAA ....x.....:..x..::.x...........:::x...:::.....:....::.::.x::::.:..:...x.....:........::.x......... 98M 68/98 69.4% 98/94230402 0.0% 0/98 0.0% 92401190 NA +3018 chr4 + 190214555 127894647 127894646 127894705 59 AAAATGCAACATTAAAGAAATAGGTGTGTATATTTGTGTGTACTCACCCACATACACAA chr4 + 94230402 29736268 29736267 29736326 29736268 29736267 29736326 59 AAAATTTGACATTAAAAAATTGGATACTTCTGTGTATGTGCACTCACCCACCTACACAA .....x::........:..x.:.:.::x.x.:.x.:....:..........x....... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 98158379 92056176 +6330 chr4 + 190214555 127894933 127894932 127895102 170 CTGTCCTTTATTCTTTGTAGATGGTTACAAATGAAGGACTTGGTCTTACAACTACAGCTTCTGGAACAGACATCTCTTCTAATAGTCTAAAAGATTGTCTTCCTAAATCAGCACAACTTTTGAAATCTGTTTTTGTGAAAAATGTTGGTTGGGCTACACAGGTGAGAAGT chr4 + 94230402 35493780 35493779 35493949 35493780 35493779 35493949 170 CTGTCATTTCTGGGTTTTAGGTGGTGTCATATGAAAAGTCTACGTTTATGGCCAATGCTACTGAAAGTCCCTGCTCCTCTGTTCATCAGACAGAATGCAGCCCAAATTCAGCTCAACTTTTAAAATCAGTCTTTGTGAAAAATGTTGGTTGGGCTTCGCAGGTGAGAAAT .....x...x.xxx..x...:....xx..x.....:::::.:xx:...:::.:.xx...x...:..xxxx.xx...:...:x.x:..x:.x...x..:xx:..x..x.....x........:.....x..:........................x.:..........:. 170M 115/170 67.6% 170/94230402 0.0% 0/170 0.0% 92401153 NA +7443 chr4 + 190214555 127896792 127896791 127896933 142 TTTTTCTAGTTAACTAGTGGAGCTGTGTGGGTTCAGTTTAATGATGGGTCCCAGTTGGTTGTGCAGGCAGGAGTGTCTTCTATCAGTTATACCTCACCAAATGGTCAAACAACTAGGTAAGTTCTTAAAATACTGGTCGAGA chr4 + 94230402 35494361 35494360 35494499 35494361 35494360 35494499 139 TCTTGTTAGCTGACCAGCGGAGCAGTATGGGTTCAATTTAATGATGGATCCCAACTGGTAGCCCAAGCAGGTGTTTCTTCTATCACTTACACCTCTCCAGATGGCCAGACAACTCGGTGAGTCTC---ACTACTGCTTGAAA .:..x:...:.:..:..:.....x..:........:...........:.....::....x.:x..:.....x..x..........x...:.....x...:....:..:......x...:...:::---.x.....x.:..:. 125M3D14M 105/139 75.5% 139/94230402 0.0% 3/139 2.2% 92402431 NA +3009 chr4 + 190214555 127897809 127897808 127897849 41 TCTGTAGAATTAGGGCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 8245467 8245466 8245507 8245467 8245466 8245507 41 TCTGTATAATCAGGGCTCTTTTTTTTTTTTTTTTTGCTTTT ......x...:......:.................x:.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 119652342 70562213 +10399 chr4 + 190214555 127898400 127898399 127899067 668 CAGTTACGATTTTGT---CTTTTTTTCTTTTGCTTCACTTAGGTATGGAGAAAATGAAAAATTACCAGACTACATCAAACAGAAATTACAGTGTCTGTCTTCCATCCTTTTGATGTTTTCTAATCCGACTCCTAATTTTCATTGATTAAAACTC------CTTTCAGACATATAAGTTTAATAAATAACTTTTTTGTTGACTTTCAAGTAAAGTGATTTTTTTTAATTTA-ACATAAAGTCTTCAGAAAGCCTTTCTATGAAAGAATTTTAACCTATAATGTAAAGGAT---------GTATTCTGAGAGAACAAAGCAGAATGAAACTTGAGTCACTTACTAAATATAGTGGATATAAAATAGAACACCTGACTTTGCTCTTAGACCATAACCCCCGAACTTACTATGTTCATATATTTGTATTGAACAATCTTTTAAAAGCAAAAATGTAAATGATGTGTAGTTT---------ATTTGTGCTTTTATTGTTTTCC-CTGCGT--CTCAGACATGTTGAGAATCATGGACAAAACCTGCTGGAATTTTGGAATTTTTGAAGATGTAAATAATGTGTATTTATG----TTATAAGTAACATATGTAAACATG---------TATATTTGTTTTATATTTATTTTTGTAACACCAGTGTCTGATGAAACATTTTTGCAAATGCATTTTATA-----AAAAAATAAATATAGTGATAA chr4 + 94230402 35495066 35495065 35495675 35495066 35495065 35495675 610 CAGTTTAAATTTTATGTTCTTATTTGCCTTTGC-------AGGTATGGAGAAAATGATAAGTTGCCAGAATACATCAAAGAGAAGTTGCACTGTCTGTCTTCTATTCTTGTGATGTTTACCAACCCAA---CTGGTCCCCACTGATAAAAGCAAAGCAGGTCTTCGGGCACAAGAGCTTAATAAACA---CACTCACTGACATGAAAGTGAC-TGATTTTATTAAGCTTATCCAGAAAGTCTTCCAAATTCTGGTTTAAAAAAAAA-------ATAGGAAGGGAAGGGTTGTTCTACAGTTTTTTTGTAAGATACTTTACAAGCACATTT-------TTCCTCAGAATGATGGATA----------------AACTTGCTC---AAGCAAAAC-----------------------------ATTGAGCAAAT-----------GAGTTCTAAATGACCTCACGTTTTTGGGAATAATCTCTATTTTTTTTCTTCCCCACTGCTTTACTCAG---TGATGATAATCAAGGAAAACATAT-CTGTGCTGTTGAAGTGTT------TGTAAATAACTTGTATTTTTACCTCTTACAAGTAATATATGTAAATATGTACATGTTTTATACCTTTTTTGTTTTTATTTTTGTAGCAGCAGCTTTTGA--------ATTCCCAA--GCATTTTATACCCCCCAAAAATAAATGCAGTGGTAA .....xx:.....:.---...x...x.:.....-------.................x..:..:.....x.........x....:..:..x...........:..:...x........x.:..:..:.---..::.:::..:....x...:.xx------::...:.:..:.x:..:........:.---:x:.:::....x.xx....:.x-.......x..x.::...-x..x.........x:..xx.:xx.:..x:...:..-------x..x:.x.x:....:.---------..x..:.x:x.::.:.xxx:.x..xx.x.:..-------..x..x.:x..::......----------------.x:......---:.x..x...-----------------------------.....:...x:-----------:.:x.x.......:x.xxx....---------..:.x.::....x..x..::..-....x.--.....---..x...x.....x...x..x.:x.-...x:x.x...:.:.x..------.........:x.......x.:----...:......:.........:...---------....::.x....:.x............:..x...:x.:...--------x..:x...--..........-----x..........::....:... 15M3I15M7D88M3D23M6I27M3D22M1D17M1I35M7D16M9I32M7D19M16D9M3D9M29D11M11D23M9I22M1I6M2I5M3D24M1D18M6D21M4I24M9I41M8D8M2D10M5I21M 398/561 70.9% 610/94230402 0.0% 156/561 27.8% 92403334 NA +3002 chr4 + 190214555 127913373 127913372 127913424 52 TTTTTTTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTGAGACAATCTTGCT chr4 + 94230402 60657974 60657973 60658025 60657974 60657973 60658025 52 TTTTTTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTTCAAAAATAATTTTGTT .......xx......xx...................:x:.:.:...:...:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 67255399 NA +10994 chr4 + 190214555 127920621 127920620 127920838 218 TTAGCTAGTTTATTCCTGAATCCTCCCATATCTTACAGAAAGAGCAATGAGTCTTTTGTAAACCACTCCCAGGAGGGTGATGGTGAGCACTATTATTCCACACACCAGGCTGAATGCCCATCGTGGTCCCCAGTGAGCATACACTTGGCTGATGAACATAGGCCCAAGAATCCGGGCTCCACTTCCAGATGCTGTTAACCAGCCCATGTATACACCCT chr4 + 94230402 35498188 35498187 35498405 35498188 35498187 35498405 218 TTAACAACTCTCTTCTTGCATCCTTCCATGTCTGACAGAAAATGCAATAAGTCTCTTGTATACTATCTCCAAGACTAACAGAGAGAGTACAACCACTCCACATATTAAGCTAAATGCCCAGCGTGGTCCCAAATGAGTGTATATTTGGCTCACAAAAACCGGTCCAAGTATGCGTGCTCCACTTCCAGAAGCAGTTAACCATCCCATGTAGACACCCT ...:.x.x.:.x...:..x.....:....:...x.......:x.....:.....:.....x..:.:::...:..xx:xx.x:.x...:..x.::.:......:.::.:...:........x.........x.:....::..:.:......x.::..x.:x..:.....x..x..x..............x..x........x........x....... 218M 159/218 72.9% 218/94230402 0.0% 0/218 0.0% 92422433 NA +13913 chr4 + 190214555 127921518 127921517 127922004 487 GCTTACCTGAGGTTTTGGTCCTAGAATTTTTGAATATAGAGTATAGGACATAAGATTGCAGACTGGATAGCCTAATCCTATTAGCACAGCTGATGTAAGGAACTGGGCCAGATGAATCACCGGGGTGTAGAGGCACCAGGCTTGTTCAATCGAGCAACCAGTTGGTCTTTCATTGTCATCT------TCCATTG---GAGACTTCCAAAGACCAATAATAATTTCCCCAAATGTGGTATTAGGGATTGAATTATTGTGCAAATCTGTAAAAACAAAACCATTGCAGTGCATTACTTGTTGATTTTAGATA-AATAACAGAGGTT-------AACATTA-----------TAGAATTATGTATGGCTATACCTTCCCACTGTATTTTGGGAAATTGATTTCCCCAAGGTAACAAGATAAAGAAGCCAACCCATACAACGATGAGTCCTCCCAGTAGAATAGCACGCTCGCCAATCCTGTTAAAGAACAGAAACTCTGTAATTTTAAAATGAAACAT chr4 + 94230402 35499526 35499525 35500020 35499526 35499525 35500020 495 GCTTACCTGAGGTTTGGGGCCTAGAATTTTTGAGTATAAAGTGTAGGACATAACATTACAAACTGGATAGCCCAGTCCTATTAGTATGTCAGAGCTGATATACTGAGCCAGATAGATCATGGGAGTATTCAGGCACCATGACTGTGTGATAGGGCAGCCTGCAGGTTCTGAGTGGTTGGATGAAAGCTGCATTGCTCGAAAACTCCAGAAAGGCATCACCATTTCACTGGGAGTTGTTTGGGGAACGGAATTATTCTTAATCTCTGTAAAAACAAG-----TAAAACGTGCCA----TTAAGAAGAGATACGATAAAAAAAGTTTCAATTAAACATTATGACTGTAGTTTAGCATAACTTGGAATTATACCTTGCCACTGGATATTTGGTAGTTTTTTCCCCCAAGGCAGTAAGATAAAGAATCCAATTAAGATGATCAGTAAGCCTCCATGGAGTATGGCACGTTCACCTGTCCTATCGAACAATGAAA-----------TTAGaattaaatat ...............x..x..............:....:...:..........x...:..:...........:.:.........:.::x.x..xx.:.x:x....:.......::....:x..:..:.xx........x.x:...x::..x.:...:..x.:x...::.xx:.x..::xx.------.x.....---..:.x:....:.:.xxx..x.:x.....x.::::x..x..x.x:..:.:x........x.xx.xx.............:-----.:x.::.::::.----..:.xxxx.....-:....x.:.:...-------.......-----------...x..x.:x.:x:::........x......x..x..x..x.:..xx..:........:.::...........x....::x.x.::.:x.xx.:x.....xx.x..x..:.....:..:..x:....:.::..x..:::..-----------...:...x...:.. 181M6I7M3I79M5D12M4D13M1I13M7I7M11I141M11D14M 314/467 67.2% 495/94230402 0.0% 48/467 10.3% 92421992 NA +3795 chr4 + 190214555 127929193 127929192 127929265 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGTGAGAATCGCTGGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.x..x...x.:..x........:..x.xx:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 51895988 NA +8159 chr4 + 190214555 127930676 127930675 127930855 180 AACTTACTTTTTGGAAAGCAACTTAACTCCTAAGAAAATAACAACGGCTTCAACCCCAAGAGCAGCAAGTATTATGCCATTATATAACACAGCTTGTTCTTGAGTCCAGGCATACATATCCATTGTTAATGGAGTAATGATGCTAAGAAAA------AAAAAATTATTCTTATT-TTATTTAAATCA chr4 + 94230402 35500366 35500365 35500552 35500366 35500365 35500552 187 AACTTACTTTTTAGACAGCGTTTTCACCACCATGAAAACAATAACAGATTCAACGCCAATGGCACTAAGGATTATTCCATTATAAAAAACAGCTTTTTCCCTGGTCCAGGAATACATATCCATCGTCAGTGGAGTGGCTATGCTAAAGTGACAATGCAAAATGCCATTATTATTATTATTTAAGACA ............:..x...:x:..x..:x.:.x.....:..:...:.x......x....x:...x:...x.....x........x..x.......x...::x:.......x............:..:.:......:::x.......::x:.------....x:::...x.....-........:x.. 151M6I17M1I12M 133/180 73.9% 187/94230402 0.0% 7/180 3.9% 92430310 NA +3629 chr4 + 190214555 127931971 127931970 127932053 83 CATGGTGGCGCATGCCTGTGGTCCCAGCTACTTAGAGGGCTGAGGCTGGAAGGTCACCTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--...:..:..........::.:.......x.:x.x:::x...:...:.....:..x.:x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 51898774 NA +5600 chr4 + 190214555 127932977 127932976 127933104 128 AAACTTACGTTTCAAAAAGGGCAAAGATAAATAGAGTCACAAAAAACAGAACATTGATGGCCACAACAGCAACCTGGTCAATATTTCCTTGGGGAACCTGAGCTTCATCTGTACTTGCTATAGGGAAA chr4 + 94230402 35501259 35501258 35501386 35501259 35501258 35501386 128 AGACTTACGTTTCAAAGACTGCAAACACAAACAAGATGACAAAGAAGAGAAAATTGACTGCTACAACAGCAACGTGGTCAATGTTTCCTTCTGCATCCTGATCCAGAACACCACCTTCTGAAAAGAAA .:..............:.xx.....x.:...:.:::.x.....:..x....x.....:x..:...........x........:.......xx.x.x.....x.:xx.x.xx:..:.x..:x.::.... 128M 91/128 71.1% 128/94230402 0.0% 0/128 0.0% 92431718 NA +9433 chr4 + 190214555 127939737 127939736 127939999 263 AACTATAGACATAAAAAACTACGTACACTTCA----TAAGGATAATTAT--CTTCCAACAATTACAAAGCTCATTAAATTTCAC------AATCTACAAAAATAGTTTTATCATTTCTA--TCTAATTACCTTAGTATGGCAAGGATCAGAATAATATTTAAAATTCCCAGGAAGGCGCTAAGTAAAACTGGTGTTGTATACATGTTTATCTGCAGTTTAATCACATCCCATGTCACACCTTTTTCTCCAAGGAATGTAAAACAAGTCTGAAAAACT chr4 + 94230402 35502309 35502308 35502582 35502309 35502308 35502582 274 AACTACAGATTTATAGTTTTA---GCACTCCAGGTTTCAGGCTGACTATTCCTTCTAAGCAATGCAAGGTTCATTACGATGCACCCACTAAACTGAGGGAGAGTATTCTGTTATTTTTCACTTTGATTACCTGAATATAGCAAAGGTGAGAATAATATTAATAATTCCTAAAAGAGCACCAAATAAAACTGGTGCCGTATACATGTTCAGCTGAAGATGAATTGATTTCCATGTTATTCCTTCTTCTCCAATCAGCGTAAAACAAGTCTGAAAAACT .....:...:x..x.:xx:..---:....:..----.x...x.:.:...--....:..xx.x.:...:.:......x:x.x...------..::x.x::.:.xx:..:.:.:....:.x--.:.:.......x.:...:....:.:.x...........x.x......:.::.::..:.:..:...........::...........:.x...x..x.x...::xx.:......:.:x....:........xx.::..................... 21M3D8M4I13M2I33M6I29M2I156M 182/260 70.0% 274/94230402 0.0% 17/260 6.5% 92437428 NA +7323 chr4 + 190214555 127942041 127942040 127942176 136 CTACCTGGACCTAGAATAAAACCTAATGCTTGACACATGCTTATGTTTGCCATGGAACTTGTTCTTTCCTGAAGGGAAGTAGCACCAGCAGTATATGATCTAACAACTGCTACATTTCCTTAAAAACAAGACACAA chr4 + 94230402 35503726 35503725 35503861 35503726 35503725 35503861 136 CTACCTGGTCCTAATATGAAGCCCACTGCTTGGCAGGCACTGGTATTGGCCATGGCACTTGTTCTTTCTGTAAGAGAAGTGGCACCTGCAATATACGACCGAACCACAGCCACGTTTCCTTAAAAAAGAGAAACAA ........x....:x..:..:..:.x......:..x:::..x:.:..x.......x............:xx...:.....:.....x...:....:..:.x...x..x..:..:............x:...x.... 136M 102/136 75.0% 136/94230402 0.0% 0/136 0.0% 92438315 NA +14250 chr4 + 190214555 127943748 127943747 127944010 263 TTACCTGCTCCAATTCCCAACAATCCACGAGCAACCAGCATGTAGTATTTATTATGAGAAGCTGGGATGTGGAGATATGCATAGAGGCAGTTGGCTGCCACGGAAATCAAGATGGAGACAATAAGAGGCTCTTTTCTTGGTCTATAATTAGACCATAAACCAAATATAGGTGAAGCTACCATTTGGCCAAGACTATATGAAGCAATAACCCAGCCCAAAAAACTTGTATCAGCTGTCGGATCAATCTGCAGAAAAAGGTACAG chr4 + 94230402 35504139 35504138 35504401 35504139 35504138 35504401 263 TTACCTGCTCCAAATCCCACAAGAGCACGTGCAGTAAGCATGTAGTATTTGTTGTGTGAATGAGGTAAGTGAACATAGGCATAAAGACAATTAGCAGCTACTGAAATTGCAGTTGAAACGACAAGAGGTTCTCTCCTTGGTCTGTAATTGGACCATAAACCAAAGAGCGGAGAGGCAACCATTTGGCCAATGCTGTATGAAGCTATAATCCAGCCCAAGAAACTCGCATCTGCTGTAGGATCAATCTGCAAAAACAAATGAAG .............x.....xx.:xx....x...::x..............:..:..x...xxx..x.x...:.x...x.....:..:..:..:..x..:..x.....::x::.x..:..:.:......:...:.:........:.....:..............x.xx..x..:..x.............x:..:........x....:.........:.....:.:...x.....x.............:...x.::.:x.. 263M 199/263 75.7% 263/94230402 0.0% 0/263 0.0% 92439609 NA +3999 chr4 + 190214555 127946775 127946774 127946857 83 CGTGGTGGTGCACGACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTTGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..........--....:.:...........::........x.xx.x...x..........:x.:..x.xx:.....:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 51913578 NA +3898 chr4 + 190214555 127947261 127947260 127947319 59 GTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCATGTGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x....:.:...........:.........x.x......x.:...........:.. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 51914055 NA +4832 chr4 + 190214555 127949782 127949781 127949988 207 AAATAGATTGAAATGTACAAACCTTTTGGAGATATGGCCATATGGACATCATCACTACAGAAAACCCT--------GTGAAGAAGCAAACTAGGTTATTT--------ATACTTA-TAATAATTTAATC----------ATTATTACAGATACAATTTTCTG-----AACCGTGGCATGGATTTTAAAATATTCTG-AACCT--AAAATCTATGCATACAAATGCCTAATTTATGAG--GCAAT chr4 + 94230402 35505486 35505485 35505728 35505486 35505485 35505728 243 AAAGACATTAATATTTACAAACCTTTTGGAGATATGGCCATACAGACATAATTACAATTGAGAAACCTGCAATGCAGTAAAAACACAACTGAAGTTACTTTGTTTGCCATGCCTATTAGTAATTCAGTCTACTGAAACAACTACTGTGGGTTCATTCTTCTGCTCCCAAGCCTGCTATGGCTTAAAACTCAGTCTGCCACCTCAAAAAACTATGTAT-TACATGCTTGCTTAAAGAGTAGCAAT ...x.x...:.x..x...........................::.....x..:..x.:x..:..x...--------..:..:.x:...x:x.:....:..--------..:.:..-..:.....:.:..----------.:..:.:::.:.x..x.:.....-----..x.x..x:....x..xx..xx:.x....-x....--....x.....:..-:.x....:.:x..x.x...--..... 68M8I24M8I7M1I13M10I23M5I29M1I5M2I13M1D19M2I5M 148/206 71.8% 243/94230402 0.0% 38/206 18.4% 92444296 NA +3352 chr4 + 190214555 127955988 127955987 127956061 74 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTAAGGCACAAGAATTGCTCGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........:.::.....:..x.x::x...x::..:........:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 51922784 NA +6150 chr4 + 190214555 127957494 127957493 127957647 154 TACTTACCTACACTGCTGAGAAACATAGTAAGATATAAAATCCTAATAGATCTCCATCGGCTCTTATAATGCTCTTCAGTCTCTAAAATGTC-CCATTCTCTAGGTGTAAAGAAGAAAAAAGTAGTATAAATTTATCTCATTACATGTGGATCTT chr4 + 94230402 35506546 35506545 35506696 35506546 35506545 35506696 151 TACTCACCTACACTACTGAGAAACATAGTCAGATACATGATCCAGATAGACCTCCACCTGCTCTTGTAATGCTCCTCTGTTTCCACGACATCTCTGGTTTTTGAGGGCGAAAGAGAAAGAAATG----ACAATCATCACATTCCCTCAGGACATT ....:.........:..............x.....:.x:....x:.....:.....:.x......:........:..x..:..:.x:.::..-.::x.:.:.::.x.::..::.....:..:.:----.x.x.:...x....x.x.xx...:x.. 92M1I31M4D27M 105/150 70.0% 151/94230402 0.0% 5/150 3.3% 92450948 NA +3333 chr4 + 190214555 127970939 127970938 127971004 66 GTGGTACATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:..:.--....:.:...........:.........x.xx.x...x::........::.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 51937738 NA +3311 chr4 + 190214555 127971123 127971122 127971207 85 GTGTGCCTGTGGTCCCAGCTACTCTAGAGGCTGCACTGGGTGGATTACTTGAGCTGAGGAGATTGAGGCTGCAGTAAGCCATGAT chr4 + 94230402 76033204 76033203 76033285 76033204 76033203 76033285 82 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGAT ...::.x...:..:.........:x.:......x:.:xx...:.x:......:.:x..:..x..x:.....:..x.---...... 76M3D6M 57/82 69.5% 82/94230402 0.0% 3/82 3.7% 51937919 NA +3741 chr4 + 190214555 127974857 127974856 127974938 82 GTGGTGGTTGTCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----.:.x....:.:...........::..........xx.x...x::...........:..x.xx:..:..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 51941656 NA +3263 chr4 + 190214555 127979426 127979425 127979484 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCATTTGAACCGGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...x..:.......x:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 51946220 NA +3082 chr4 + 190214555 127980803 127980802 127980847 45 GCAACAGAGCAAGACTGCATCTCAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382708 88382707 88382752 88382708 88382707 88382752 45 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAA ....x:.........x..x.........::.:............. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 39598095 NA +7856 chr4 + 190214555 127982926 127982925 127983051 126 TTTTGTTTTATAGATGCTTGTTTGCTACTGATGGGTGTGAGCAAGTTAGATATTCTATACCGGAGACTTCTCCTAACAAAACTTTTTATCAGAGGATGGGGAAGGCCAGAAGATCTCAAAAGGCAA chr4 + 94230402 35511713 35511712 35511838 35511713 35511712 35511838 126 TTCTTTTTTCTAGATGTCTGTTTGCTGCTAATGGGTGTAAGTAAATTAGATGTCTTGTACAGAAAGCTTCTCCTCACTAAACTCTTCATCAGAGGATGGGGAAAGCCAGAGGATCTGAAGAGGTGA ..:.x....x......::........:..:........:..:..:......:.::.:...x.:.::........x..x.....:..:................:......:.....x..:...::. 126M 98/126 77.8% 126/94230402 0.0% 0/126 0.0% 92471213 NA +8028 chr4 + 190214555 127984296 127984295 127984448 153 TAAAAGATTAATTTTTTCCTTTTTGTCTTCTTTCCCATAATAGACTCTTTGAATTCAGAAAGATGATTGGAAATCGGGAAAGATGCCAGAATCTGGTTTCAAGCGATTATCCAGTACACATTGATAAGGTATTCAAATGAGAGAAACACAGTT chr4 + 94230402 35515460 35515459 35515609 35515460 35515459 35515609 150 TAAAAAATGAATCTTTTCTTTACTTGTTTCTGTTC---AACAGAATATTTGAATTCAGAAAGATTATTGGAAACAGGGAAAAATGCCAGACACTGGTTTCAAAAGATTACCCAGTATTTATTGACAAGGTATGTAAATGCAAGGGATACAGTT .....:..x...:.....:..x:.xx:....x.:.---..:...x.x.................x........:x......:........xx..........:x.....:......:x:.....:.......x:.....x:..::.:...... 35M3D115M 116/150 77.3% 150/94230402 0.0% 3/150 2.0% 92468836 NA +3082 chr4 + 190214555 127990435 127990434 127990506 72 GCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGCATCTATTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:........:..::........x.xx.x.x.x.xx..........:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 51957229 NA +3159 chr4 + 190214555 127997861 127997860 127997910 50 TTCCTCTCCTCCTCCTCGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTG chr4 + 94230402 73021697 73021696 73021746 73021697 73021696 73021746 50 TTGTTTTTCTTCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTG ..x:.:.:..:..x:xx................................. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 54976164 NA +3049 chr4 + 190214555 128003950 128003949 128003997 48 AAAAAAAAAAAAACAAAAAAAAACCAAACAAACAAAAAACCATTTCAA chr4 + 94230402 48373520 48373519 48373567 48373520 48373519 48373567 48 AAAAACAAACAAACAAAAAAACCCCAAACAAACAGAAAACCCCTCCAA .....x...x...........xx...........:......x:.:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 79630430 NA +3615 chr4 + 190214555 128005089 128005088 128005171 83 CATGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGATGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--....:.:...........::...x....x.xx.x...x..........::.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 51971892 NA +3552 chr4 + 190214555 128007005 128007004 128007105 101 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACCTGAACCTGGGAGGTGGAAGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....::..:.--....:.:...........::........x.xx.x...x...:......::.:..x.xx::.:..:..------..x..x...... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 51973808 NA +10876 chr4 + 190214555 128008917 128008916 128009203 287 TAGGTTCCAATTTATTGTGCCTAAAGAATGGAACAGCAAATATAGACCTGTATGCATTCATCTTGCTGGAACAGGAGATCATGTAAGACTTTATTATAATGCCTTAATCTCTAGATAATTTGTTAACATATTCTCCTTAACAGAAGTGGCTACTATATTCTTTTGAGTATGTGTTCTTTTCTTTCCTTAGCATTACTGGAGGCGACGAACACTAATGGCCCGTCCTATGATTAAAGAAGCCCGAATGGCTTCTTTATTGTTAGAAAACCCTTATTATATCCTTTTGT chr4 + 94230402 35518417 35518416 35518675 35518417 35518416 35518675 259 TAGGTTTCAGTTCATAACACCCAGAAGATGGAATAGCAAGCACAGACCTGTATGCATTCATTTAGCAGGCACTGGGGATCACGTAAG-------TAAAATG---TAA-----AACGAATCAGTGAGAAAATAAACGTT--------TGGATTTTATCTTATTATGATTATGCATCTTAT-----CTTCAGCACTTCTGGAGGAGACGCACGTTAATGGCTCGTCCGATGATTAAAGAAGCCTGTATGGCTTCCCTATTGCTTGAAAATCCTTATTATATCCTTTTGT ......:..:..:..x:::..:.:.::......:.....::.:..................:.x..x..x..x..:.....:.....-------..x....---...-----.:xx...:x..x.:x.x..xxx.x..--------...x.x:...x..x..x...x....::.::.x.-----.:.:....:.x.......x....x..::.......:.....x...............:.x........::.....:.x.....:................... 87M7D7M3D3M5D26M8D33M5D103M 194/259 74.9% 259/94230402 0.0% 28/259 10.8% 92490500 NA +3334 chr4 + 190214555 128010784 128010783 128010844 61 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAAGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x....:.:...........::........x.xx.x...x.x..........::.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 51977580 NA +3429 chr4 + 190214555 128011586 128011585 128011708 123 TGTGTAAAATTTAACTATTTAATGTACTCTCAGACAAACAAAATTATTTA-----ATTATTTTAAAACTTTCTCTTTGACCC-ACATTCTTAAATGGCTGCAGGAAACCCAAGGACCAAGTGTAAGTAT chr4 + 94230402 35519304 35519303 35519423 35519304 35519303 35519423 120 TGTGTGTGatttatttatttattttatttt-----aatCGCCAATTTTTATATAGACAATTCTTA----CTTTCTTTAACTTGAGACTTCTACATGGCTGCAGAAAACCCAAGGATCAAATGTAAGTAT .....:x:.....x:......x.x..:.:.-----..x.:xx.x.x....-----.:x...:.x.----:.:.....:..::-.x.:.::..x..........:...........:...:......... 30M5D15M5I10M4D13M1I46M 82/114 71.9% 120/94230402 0.0% 15/114 13.2% 92492282 NA +3303 chr4 + 190214555 128012926 128012925 128012995 70 CATGGTGGTATGCACCTGTAGTCCCAACTACTGGGGAGGCCGAGGCAGGAGAATCGCTTGAACCTAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.....--....x......:...:.....x.::....:...x.xx.x...x.:........:..:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 51979729 NA +12001 chr4 + 190214555 128017308 128017307 128017518 211 TATTAGCATGTAAATACATAAAATAATCATTTTCTATT--TTGTTTTGTGAGGCTAGAAGGTCCAGCTTAAAAAATGTGTCCGACCTTTTTGTGATGGGAGGAGCTCTTGTTTTAGAATCTGCAGCTCTCTTGCACTGGCTAGAGAGGGAAGGTTACGGCCCTTTAGGAATGACTGGAATATCCATGGGAGGACACGTAAGCCTTTTTATTTC chr4 + 94230402 35521100 35521099 35521312 35521100 35521099 35521312 213 TGTCAAAATCTAATCTTAGAAAATAAATCCTGTCTTTTCCTTTTCTGGGGAGAAAAGACGGTCATGTTTAAAAAATGTCTCGGACCTGTTTGTGATGGGAGGAGCTCTTGTTCTAGAATCGGCAGCTCTTTTGCACTGGCTAGAGAGAGAAGGCTATGGACCGCTAGGGATGACTGGAATATCCATGGGAGGACATGTAAGCTTTTATATTTC .:.:.:x..x...x:x:.x.......x:x:.x...x..--..x.:.x.x...:xx...x....xx.:...........x..x.....x........................:.......x........:.................:.....:..:..x..x:....:..........................:......:...x...... 38M2I173M 168/211 79.6% 213/94230402 0.0% 2/211 0.9% 92496208 NA +6586 chr4 + 190214555 128020067 128020066 128020213 147 TGTTATATTACAGATGGCTTCCTTAGCGGTATCCAACTGGCCTAAGCCCATGCCATTGATTCCATGCCTGTCTTGGTCCACAGCATCTGGGGTCTTCACTACGGTAATTTAATTGTA-ATTAATATTAG-GTAGCTATATATAATTAGA chr4 + 94230402 35522594 35522593 35522742 35522594 35522593 35522742 149 TGTTTGATTCTAGATGGCTTCTCTGGCAGTGACGAATTGGCCTAAACCATTGCCATTGATTCCATGTCTTTCGTGGTCAACAGCCTCTGCAGTCTTTACTACGGTAATTGACCGATATTTTTATATTAATATACTGATGTGTAATCAGA ....xx...x:..........::.:..:..:x.x..:........:..xx................:..x..x.....x.....x....x:.....:............x.x:x:..-x..x......:-:..x:x..:.:....:... 117M1I11M1I19M 109/147 74.1% 149/94230402 0.0% 2/147 1.4% 92497473 NA +8868 chr4 + 190214555 128021123 128021122 128021255 133 GCTTATTATTTCAGGGTGTGTTGAGTAAATCAATTAATTGGAGGGAGCTGGAAAAGCAATATTATACCCAGACAGTTTATGAAGAAGAAATTATTCACATGCTTGAATACTGTGGAGTAAGTAT----TTCACTTTC chr4 + 94230402 35523352 35523351 35523488 35523352 35523351 35523488 137 GTTTATAACTTCAGGGTGTGTTGAGTAAAGCAGTGAACTGGAGAGAGCTTGAGAAACAGTATTATACACAAACTGTTTACGAAGAAGAAATCATTCAAATGCTTGAATACTGTGGAGTAAGTATATAGTTTATTTTC .:....x.:....................x..:.x..:.....:.....x..:..:..:........x..:..x.....:...........:.....x..........................----..:.:.... 124M4I9M 113/133 85.0% 137/94230402 0.0% 4/133 3.0% 92497771 NA +3029 chr4 + 190214555 128023388 128023387 128023439 52 AGACTCTTGTCTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTGG chr4 + 94230402 22436112 22436111 22436163 22436112 22436111 22436163 52 AGCCTTTTGTCTCCATGGAAAACATAAAAAAAAAAAACAAAAAAAAAACAGG ..x..:.......:.:::....x.x............x.........:.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 105587276 84627279 +3604 chr4 + 190214555 128026319 128026318 128026401 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAAAGGGTGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........::::........x.xx.x...x.:..........:...xx.x::.:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 51993122 NA +14991 chr4 + 190214555 128028468 128028467 128028884 417 TGTTCAGACAGATTCTTTCAAAATGGGACAAGAGTTTGTGAAACACTTCACTAGCAGTGCAGACAAGCTAACTAACCTTAATCTGGTTTCCAGAACTTTAAATTTAGATATATCAAACCAAGTTGTATCCCAAAAACCTGCTGACTGCCATAATTCTAGCAAAACATCTGTCAGTGCGACATCAGAAGGACTCTTATTGCAAGATACCTCTAAGATGAAGCGCTTCAATCAAACACTTTCAACCAACAAAAGTGGTTATACAAGTCGCAACCCTCAGTCATACCACCTACTTAGTAA-AGAACAAAGCAGAAACAGTCTTCGGAAAGAGTCTTTAATATTTATGAAAGGAGTCATGGATGAATGTACTCATGTAGCAAATTTCTCAGGTACTAATTTTT--------ATATGAAATTGAGAATATT chr4 + 94230402 35524103 35524102 35524521 35524103 35524102 35524521 419 TGTTTAGACAGATTCTTTCAAGATGGGACAAGATTTTGTTAAAAACTTCCCTGACAATGTGGATAGTTTGGAGGACATAGATGTGACTTCAAGAATGTTCAACTTTGATTCATCAAACAAGACTGAGTCTAAAGAAGCTGTCCACAGCTTTGCCACAAGTAGAAGTACTCTAAGTGCCTCATCGGAAAGACTCTTAATGCAAGATGCTCCTAAAATTCAGTGCATAAATCAAACGTTTTCAACC------AGTAGCAATAAAAACTTAACCATCCAACAGGGACACAGGATAAATAATAGAACAAAG-AGTGACACTTTGCAGAGAGAATCATTAAGGTTTATGAAAGGAGTAATGGATGAATGTACTCACGTAGCTAACTTCTCAGGTATGTATTTATTTGTTTCAATGTGGAGTTGGGAAAACT ....:................:...........x.....x...x.....x..::..:..::..:.:x:.::xx:..x.x:..x..::...x....:x..x..:..x...x:.......x.:::..x:..:x..:..x...::x..x..:x.:x:x.x..:.:..xxx..x.x.....xx....:...:........x........:.::....:..xx..:..x.x........::........------...:.:x...x..:::xx.x.x::..::x:x:x...xx:x.x.:...-.........-..x:...x.:.x.:..:...:..x....x:..............x.................:.....x..:..........:xx....x.--------..:..:.:...:...x.:. 244M6D47M1I9M1D91M8I19M 281/410 68.5% 419/94230402 0.0% 16/410 3.9% 92504365 NA +3502 chr4 + 190214555 128030016 128030015 128030106 91 GTGGTGGCATTCACCTGTAGTCCCAGCTACTCAGGAAGTTAAGGAGGGAGGATCACTTGAGCCCAGGAGTTCAAGGCTGTAGTGCACTATG chr4 + 94230402 76033201 76033200 76033286 76033201 76033200 76033286 86 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ......-----...x......:.........::::.:.:.:..xxxx.x.:.x.......:.....:..:.:x:........x:..:x... 6M5D80M 60/86 69.8% 86/94230402 0.0% 5/86 5.8% 51996815 NA +10720 chr4 + 190214555 128030457 128030456 128030681 225 TTTTTTTATTTTCTAATGTGTATATG--TTGAATTTTTAAAAATCCTATACCTAGTCCCAGTTGATCCAAGCCTCATTATAGTGGTTCAAGCCAAAGAAGATGCCTATATTCCACGAACAGGAGTTCGAAGTTTACAAGAAATTTGGCCTGGTTGTGAAATCCGATACTTAGAAGGGGGTCATATTAGTGCTTATCTTTTTAAACAAGGACTCTTCAGGTAAGACGG chr4 + 94230402 35526434 35526433 35526658 35526434 35526433 35526658 225 TTCTATCATTTTCTAATCT-TAGATGAATTCCATTTTGAGTTGTTTT-TCTTTAGTTCCAGTTGACCCCAGTTTAATCATAGTTGTGCAAGCTAAGGAGGATGCGTATATTCCTCGAACTGGAGTGCGCAGTCTGCAAGAAATCTGGCCCGGATGTGAAATCAGGTATCTGAATGGAGGTCATGTCAGTGCCTACCTCTTCAAACAAGGACTCTTTAGGTAAGGTAG ..:.x.:..........x.-..x...--..xx.....x.:xx:.::.-.x::....:........:..x..::.x..:.....x..x.....:..:..:.....x........x.....x.....x..x...:.:........:.....:..x.........x.:..::.::.x..:......:.:.....:..:..:..:..............:.......:::. 19M1D6M2I19M1D179M 166/223 74.4% 225/94230402 0.0% 4/223 1.8% 92504023 NA +3320 chr4 + 190214555 128032557 128032556 128032628 72 GCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAACCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:.........::::........x.xx.x...x.:........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 51999351 NA +3074 chr4 + 190214555 128033516 128033515 128033585 70 AAGATAGTCTTTTTTTTTTTTTTTTTTTTGTCTTTTTTGAGACAGAGTCTCCCTCTGTCACTCAGGCTGG chr4 + 94230402 34301632 34301631 34301701 34301632 34301631 34301701 70 AAAATAGTATTTTGTCTTTTTTTTTTTCTCTCTCCTCTAAGTCAGTCTCACCATCTGTTTTTCTGCCTGG ..:.....x....x.:...........:.x...::.:.:..x...xx..x..x.....:x:..x.x.... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 93731884 NA +3797 chr4 + 190214555 128035437 128035436 128035503 67 GTGGTGCATGCCTGTAATTCTAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACCGGGAGGC chr4 + 94230402 76033201 76033200 76033265 76033201 76033200 76033265 65 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ........:.--....:...:.........::........x.x..x...x..........x:..:.. 10M2D55M 53/65 81.5% 65/94230402 0.0% 2/65 3.1% 52002236 NA +3663 chr4 + 190214555 128035757 128035756 128035806 50 TTTAGACAAGCCATCTATGATGCATTTGACCGCTTCCTCCATAAATACGC chr4 + 94230402 35527600 35527599 35527649 35527600 35527599 35527649 50 TTTAGGCAAGCGATTTATGATGCATTTGACCGCTTTCTTCAGAAATACAC .....:.....x..:....................:..:..x......:. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 92508157 NA +3094 chr4 + 190214555 128041246 128041245 128041319 74 GTGTGCCTGTACTGCCAACCACTCAAGAGGCTGATGCAGGAGGATCACTTGCACCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....x.x...:.:...::.:.......xx.xx.x.:.x......x......:..:.:x:.....:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 52008042 NA +3219 chr4 + 190214555 128041600 128041599 128041672 73 TGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGACAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........::::........x.xx.x...x.:.........x.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 52008395 NA +3846 chr4 + 190214555 128042068 128042067 128042139 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 52008862 NA +3340 chr4 + 190214555 128042923 128042922 128042982 60 TCTGGCACATACCTTGGTTTTTTTTGGTTTTTATTTGTTTGTTTGTTTTGTTTTGTTTTT chr4 + 94230402 79014373 79014372 79014430 79014373 79014372 79014430 58 TCTGG-ACATTCTCTGGGTTTTTG-GGTTTTTTTTTGTTTGCTTGTTTTGTTTTGTTTTT .....-....x.::...x.....x-.......x........:.................. 5M1D18M1D35M 51/58 87.9% 58/94230402 0.0% 2/58 3.4% 49028550 NA +3333 chr4 + 190214555 128042934 128042933 128042990 57 CCTTGGTTTTTTTTGGTTTTTATTTGTTTGTTTGTTTTGTTTTGTTTTTTGCCAGAG chr4 + 94230402 55690040 55690039 55690091 55690040 55690039 55690091 52 CCTTGATTTTTTTT-----TTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCCCCAAGG .....:........-----..:....:......................:x...::. 14M5D38M 45/52 86.5% 52/94230402 0.0% 5/52 9.6% 72352894 NA +3077 chr4 + 190214555 128042936 128042935 128042988 53 TTGGTTTTTTTTGGTTTTTATTTGTTTGTTTGTTTTGTTTTGTTTTTTGCCAG chr4 + 94230402 6210985 6210984 6211037 6210985 6210984 6211037 53 TTTGTTTTCCCTAGTTTTTGTTTGTTTGCTTGTTTTCTTTTTCTTTCTGGCAG ..x.....:::.:......:........:.......x....x:...:..x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 121831951 68382604 +3580 chr4 + 190214555 128065199 128065198 128065362 164 GTAGTAACCATGGTCTCTTCCCAACACTGACTCTGCACTGTTCTCC-CACAATTAATTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTC----TCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTT chr4 + 94230402 63697069 63697068 63697239 63697069 63697068 63697239 171 GTAATTTCCATGCTTTCTTATTATATTTAAATGTGA---GTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:.xx.....x.:....x::.xxx:.:.x.x..x---..x....-..x.x..x...:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x..:.:..----...:...:...::..........::.::.:...x:.. 36M3D7M1I22M5I59M4I37M 102/161 63.4% 171/94230402 0.0% 13/161 8.1% 64368130 NA +3486 chr4 + 190214555 128065252 128065251 128065428 177 AATTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTTCAAGAG-ATGGAGTCTCTCTGTGTTTCCC--AGGCTGGTCT chr4 + 94230402 6297112 6297111 6297294 6297112 6297111 6297294 183 AACTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCTGACAGTAAGAAAATTGGGTGTGTTTCTCTGAAGTTTGTCT ..:.....:..---....xx:.......x:...x.x.x....:.x..::..xx:::x.:.:.::x:x...:.x.....:...x..x:...:..x.::.....:x.x:xx......x.x:.xx:...:....:...:.x..x:::.x..-.x.:.:x:.xxx........:.--.:.:.x.... 11M3I134M1I22M2I10M 107/177 60.5% 183/94230402 0.0% 6/177 3.4% 121768140 68446415 +3049 chr4 + 190214555 128065254 128065253 128065369 116 TTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT chr4 + 94230402 63697118 63697117 63697238 63697118 63697117 63697238 121 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ...x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::.:x..:.:..x.xx..:..:::.::.:.:.:..:.:.:...:...:.x.. 17M5I99M 68/116 58.6% 121/94230402 0.0% 5/116 4.3% 64368136 NA +3182 chr4 + 190214555 128065255 128065254 128065354 100 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx...:......:.:::..:::..::..:.....:x... 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% 64368115 NA +3249 chr4 + 190214555 128065257 128065256 128065374 118 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::.:x..:.:.:x.xx.::..:...:::..:..:.:..::..:.....:x... 18M5I100M 70/118 59.3% 123/94230402 0.0% 5/118 4.2% 64368140 NA +3566 chr4 + 190214555 128065259 128065258 128065358 100 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx...:......::::....::......:::....x... 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 64368119 NA +3229 chr4 + 190214555 128065261 128065260 128065382 122 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx...:.x...:xxx.::..x.:...::x:xx.:..::.:..:::..........::.::.:...x:.. 13M1I109M 72/122 59.0% 123/94230402 0.0% 1/122 0.8% 64368144 NA +3305 chr4 + 190214555 128070532 128070531 128070621 90 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCACTGAGCCAAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA------GAACATGATGCCA ....x....:.:...........::........x:xx.x...x::.........:.:..x:xx:..:..:.------x..x...:..... 71M6D13M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% 52037326 NA +3232 chr4 + 190214555 128073418 128073417 128073479 62 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAATACTACCTCATACTCT chr4 + 94230402 41975901 41975900 41975962 41975901 41975900 41975962 62 CAGATTAAACAAACAAACAAAAAAAAAACAGAGAGAGAGAAAAAAATTCTACATCACACACT ..:.xx...x...x...x..........x...:...:.....:....x....x...:..x.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 86097517 NA +3102 chr4 + 190214555 128073548 128073547 128073602 55 ATTTTCTCCTGTTATATTGTTGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 74466632 74466631 74466686 74466632 74466631 74466686 55 ACTTTCTACTGTTCTACTGTTGTTGTTTTCCCTTTCTCTGTTTCTTTTTCTCTTT .:.....x.....x..:......:.....:::...:.:.x...:.....:.:... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 53606916 NA +3872 chr4 + 190214555 128078467 128078466 128078543 77 GTTGCGCACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.:....x......:.........:.::........x.xx.x...x::...........:..x.xx:..:..:.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 52045266 NA +8490 chr4 + 190214555 128082144 128082143 128082311 168 AATGATTTTGTTTTCTTCAAGCTAATAAGCACAAGTGGGTACCACTCCACTTAGATGTTGTAAGATCAGAGAGTCAAGAAAGACCTGGATCCCGGAACAGCTCAAGATGTCAACCTGAAGCAAATAAACCAACA---CATAACAATAGGAGAAATGATACACGAAGTAAGT chr4 + 94230402 35546135 35546134 35546304 35546135 35546134 35546304 170 AAAAATGTTAACTTCTT-AAGGTAACAAGCAAAAATGGGTTCCACTTCACTTGGATGATGTAAGGTCAGATAGTCAAGAAAGATCAAGCTCTCGAAGTAGCTCAAGATCTCAGCTGGAGACAAACAAGTTAATACTTCATAACAACAGGCGGAATGAGACAAGAAGTAAGT ..x:..x..:x:.....-...x...:.....x..:.....x.....:.....:....x......:.....x............:.x:.x..:..:.::..........x...:.:x..::....:..:::..:.---........:...x.:.....x...x......... 17M1D116M3I34M 127/167 76.0% 170/94230402 0.0% 4/167 2.4% 92536009 NA +4050 chr4 + 190214555 128087738 128087737 128087844 107 ATGCAGTGGTGCAAGCCTGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGGATTGCTTGAGCCTGCGAATTTGGGGCTGTAGTGCACAATGATCATACATGTGTG chr4 + 94230402 76033196 76033195 76033299 76033196 76033195 76033299 104 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG-CCAAGCAGATGTG .::..........x.--......:...........::...:....x.xx.x.:.x::.....:..::x:.::..x.........x:..::...-:..x:..x:.... 15M2D76M1D13M 72/104 69.2% 104/94230402 0.0% 3/104 2.9% 52054542 NA +18841 chr4 + 190214555 128090985 128090984 128091531 547 TTTTTATTTTTAAAAGGTTGGAAGCGAGATAGAGAAAAAAGGGATGATCAAGATGACGTTTCCAGTGTGAGAAGTGAGGGTGGTAATATCCGAGGTTCCTTTAGAGGTCGAGGAAGAGGCCGAGGACGGGGAAGAGGACGAGGCAGAGGAAATCCTCGATGTAT-----GACATAATT--------TTTGTTTCGTTAAA-----------------------TTAGATAAACTTTGAAAAAAATAGAGCAAC-TATCCTCTATTATG----TTTTAACTAA----------TTTTCTTTGTCTGATAATAGATGGTTTTATGTTTGTTAACCTTTGAAGT--TCTTCACTTTATCCGTAGTAACTATTTTTTTCT---AATATGTG------------------ATTACCTTTCTTTTTCTTTATTCACATC---AAGTGAACTTTGATTATTCATATGGTTATCAAGAAC---ATGGTGAAAGGACTGATCAACCATTTCAAACAGAACTTAATACCAGTATGATGTATTACTATGATGATGGTACAGGTGTACAGGTGTATCCTGTGGAAGAAGCATTGCTTAAAGAGTATATTAAGCGTCAAATGTAAGTGGA-TGTTTGATGT chr4 + 94230402 35548658 35548657 35549264 35548658 35548657 35549264 607 TTTTTTTCTTTTAAAGATTGGCATCGTGATAGAGAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCTCCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAGTGGAGTCTGTTTT-TTAAACCTTGTTTATAATGTTGATGTTTTCATATGAAGTTGGAGTTATCTCAAGATACATATCCTGTAGCTTGATATTTTCAAGTAGTTTGTGGGTTTTTTGTTTGTTTTAAAACAGATGG-----TGAAAGCCAACC-ATGAAGTAGCGTGCATATCA-----------TGTTTATGTCTCAAAATGTGTGTGTACCGGACTTAATTGAATTAATTTTCATTTTC---ACCTGCATTTTGAAGGGAACTTTGACTATTCAGTTGGTTATCAAGAACTGTATGGTGAAATAACTGACCAAGCATTTCAACCTGAGCTTAACTCTAGTATGATGTATTACTACGATGATGGAACAGGAGTGCAGATGTATTCTGTGGATGAAGTTCTTCTGAAAGAATATATAAAACGTCAAATGTAAGTAGATTGTTTAGTAT .....x.:...x....:....x.x..x...........:..:........x.....x..x.x.....................:.:::.:....:x.:..::.....:x..........:x....xx::............:..........:...x..x....-----..x...:x.--------.:.....:-.....-----------------------.:.x..:..x..x..:xx.xx.x:..xx..-......x..x:x..----...:..x..:----------....x.....:.x.x..:......-----..xxx.::....-x......--:x.x..:x.:.-----------.:...x.x...---...:....------------------....x:....x.....---.::::...:---...x.........:......xx..............---.........x:.....:...x........x.x..:.....:x.:.................:........x.....x..:...:.....:.......x....:x:.x..x.....:.....x..:..............:..-.....::.:. 164M5I9M8I8M1D5M23I30M1I14M4I10M10I24M5D12M1D7M2I11M11D11M3I8M18I16M3D9M3I36M3I142M1I10M 403/526 76.6% 607/94230402 0.0% 102/526 19.4% 92542327 NA +22484 chr4 + 190214555 128092687 128092686 128093191 505 GGCACCTTCCTGGGTTGCCTTCATGGTGGATCCAATTTGCT----TACAGTGTGGAGCAACTTGTTTATATTGTTCTTGCTTCTTTTGTTACAGTTGATGCAAACACTGAAGAAAAGGGCCTTTTTGTGGGCAGAAAGTGCTTGACATGTGGCTGTCAACTTCATA-CCACTATTACTGTCTTTTTTGTAACTTTTGCTGCCAAGTCCCTTCTGAGACCTGACAGTGGACATGCAACTCCATGTCAGGATAATCGGCCTCCAGTGTGCTCATACAAGTGAGGGAGGAGCAGAGCTACTTCAGTGTTGACAAAATTTCTGATCATGCAGTGTAGAATCCAGAGCCTCTAAGGTAGGACTTGATGATGTCC----CTAGGACACTGAGCAAAATGTCAGACATGGCATTGGTCATGCCTCTTTTTTTGTTG----------TTGTTCTAGCAGTAGGGATTTTGGCAAATGTTAGTAGAGCACTAGGTTTAGTGTGGCTTGTTATTATTATTACCATTCTTTGATT chr4 + 94230402 35549909 35549908 35550416 35549909 35549908 35550416 508 GGCATTTCCCCACGATGCCTGTGTGGTGGTTTTTTATTGCCCTTGTATCCCATAAAGCAACTTGCTTATTTTATTCTTGCTTCTTTTGTTACAGTTGACGAAAAAAAGGAAGAAAAAAGCCTGTTTAAGGGCAGAAAGTATCTGGCATGTGGCTATCAACTTCAAAACTTCTATTGCAATCTTTTTTGTTACTCTTGCTACCAGGCCCCT-ATGACACCTGACAGTGGACATGTACCCCCATGTCAGGATAATCGGCCTGCACTGTCCTCAGACAAGTGAGGGAGGAGCACAGACACTCCACTGTTGGCCAGATTTCTGGGCATGCAGTGTAGAATCCAGACCTTCTAAGGTAGGACATGATGATGTCCCCCTCTGG-----TGAGAAAAATGTCAGTTGCAGCATTGGTCACATCTGACTTCTGGTTATATTTGTGTTTTATTTTAGCAA-AAAGAGGTTGGCAGGCGTCCATAAAAGAC-------AGCATAGCTGGCTA--ACCAGTGCCATTGATTGCTT ....::.:..::x.x.....x::......x.::xxx....:----..:xx::.::.........:....x..:.........................:.x...x.xx........::....x...:x...........:::..:.........:.........x.-.:x.....:.x:..........x...:.....:...:.:....-x...x.................:.x.:.....................x..x...x....x..................x..x:...:..x.....:.x.:.......:x....................x.:.............x...........----..:.-----....x..........x::::..........:::..xx:..:.x...:----------..:..:.....:-.::..xx......:::..:x:..:.:x..-------..::.:...x.:..--.::.x.:.....xx...x.. 41M4I121M1I43M1D158M4I4M5D47M10I12M1D29M7D14M2D20M 370/489 75.7% 508/94230402 0.0% 35/489 7.2% 92542778 NA +3132 chr4 + 190214555 128095476 128095475 128095547 72 TGAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGTAAATGATTTACTAG-----TGTTACTGAGTGAGATGTCA chr4 + 94230402 90233444 90233443 90233518 90233444 90233443 90233518 75 TGAAACACCATTACAAAAAGAAAAAAAAAAAAAAAAGGCAATAATT--CTAAAACCTTATTACTGACTTTGATGCTA ......x....:x......:.................xx...:...--...:-----.:.......x.xx....::. 46M2D4M5I20M 56/70 80.0% 75/94230402 0.0% 7/70 10.0% 37862032 NA +9685 chr4 + 190214555 128098167 128098166 128098334 168 TTCTGATTTCTCTTTTCAGTGAATATTACTTCAGTGTAGAAAATTTGGAACGAGACTTCTTTCTTCGGGGAAAGATGGATGAACAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAGGCTCTCACTACAAACCTTAATCTCATCTTAGAGGTAA chr4 + 94230402 35552948 35552947 35553115 35552948 35552947 35553115 168 TTTTTGTTTCTCTGTCCAGTGAGTATTATTTCAGCACAGAAAACTTGGAAAGAGACTTCTTTATGCGGAGAAAGATGGACCAACAAGGATTTCTGCCTATTTCATTGATTGCTAGCTTCCACAGGGTGCAAGCTCTGACTACAAATGCTACGCTCATTTTGGAGGTAA ..:.x:.......x.:......:.....:.....:::......:......x...........x.x...:..........:x.......x..::..........x:........:.:..:..xx.x..x..:.....x........:x:..xx.....:..:....... 168M 130/168 77.4% 168/94230402 0.0% 0/168 0.0% 92545219 NA +4086 chr4 + 190214555 128098673 128098672 128098794 122 GAGTACAACGGCGCAATCAAACACAAATTTCTTCAGGTTACTGTAAAAAAGCATGTGTTCCTGTATATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250940 33250939 33251061 33250940 33250939 33251061 122 GGGGATAACAGAGTATTCCACACCAAATGTTCTGTTATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.x.:...:.x.:.x..x.xxx.....x.::.xxx:.....x..x.x.:xx:x..x..::.x.:.:...:...........:.:........x.x.....x...x.....x..x....... 122M 81/122 66.4% 122/94230402 0.0% 0/122 0.0% 94847733 NA +3408 chr4 + 190214555 128098730 128098729 128098799 70 TTCCTGTATATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGA chr4 + 94230402 33250999 33250998 33251067 33250999 33250998 33251067 69 TTTTTGTGTGTGTGTGTATATATGTGTATATATAGA-GTTTTTGTTTGTTTTTATTATTTTTTTACAAGA ..::...:.:...:...:.....:.:........x.-:.....x...x.....x..x.......x:.... 36M1D33M 53/69 76.8% 69/94230402 0.0% 1/69 1.4% 94847731 NA +3327 chr4 + 190214555 128098735 128098734 128098790 56 GTATATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522769 23522768 23522824 23522769 23522768 23522824 56 GTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ...::...:.....................x:x....::.x.....:.x....:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 104575966 85638589 +3310 chr4 + 190214555 128098738 128098737 128098792 55 TATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522770 23522769 23522824 23522770 23522769 23522824 55 TACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..:..:.....:.................x::....::.x.....:.x....:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 104575968 85638587 +3424 chr4 + 190214555 128098744 128098743 128098797 54 TGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 23522774 23522773 23522827 23522774 23522773 23522827 54 TGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCAA .....:.:..................::....::.x.....:.x....:..:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 104575970 85638585 +3076 chr4 + 190214555 128100749 128100748 128100833 85 TATGTATTTTGCAAATATTTTTTCCTAGTTTTTGTCTTTTCATTTTCTTTTCTTTTCTTTTTTTTTTTGTTTTTTGTTTTTGTTT chr4 + 94230402 29320090 29320089 29320174 29320090 29320089 29320174 85 TATATATCTTAAGAACATTATGCTATAATCTTGCTGTTCTGATGATCTTTTTCTCTCTTTTTATTTCTTTATTTTACTTTTGTTT ...:...:..:x:..:...x.x::x..:.:..xx.x..:.x..xx......::.:.......x...:.x.x....::........ 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 98780659 91433896 +10407 chr4 + 190214555 128107134 128107133 128107328 195 AATAGGCACTGAAGGATAGCACAGAAGTAGAAATTGTGGATGAGAAAATGAGAAAAAAGATAGAACCAGAAAAATGGCCAATTCCAGGCCCTCCTCCACGCAGTGTGCCACCAACAGACTTCTCTCAACTGATTGATTGTCCAGAGTTTGTACCAGGCCAAGCCTTTTGCTCACATACAGGTAACATCTTTTCTT chr4 + 94230402 35556426 35556425 35556620 35556426 35556425 35556620 195 AACAGGCCCTAAAGGACAGTACAGAAGTTGAAACTGTGGATCAGAGGATAAGAAATATGGTTGATCCAGAAAAGTGGCCGATTCCAGGTCCACCTCCCTGTAATCTGTCAAGGACTGACTTTTCTCAGCTCATCAATTGTCCAGAATTCATACCAGGGCAAGTTTACGGCTCACATACAGGTAAAGGATTTCTTT ..:....x..:.....:..:........x....:.......x...::..:.....x.x.:.x..x........:.....:........:..x.....x:.:.:.x..:..xx:..x.....:.....:..x..::..........:..::.......x....::.x:x................x:xx...::.. 195M 145/195 74.4% 195/94230402 0.0% 0/195 0.0% 92550708 NA +3096 chr4 + 190214555 128110537 128110536 128110606 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 52077340 NA +3449 chr4 + 190214555 128111572 128111571 128111645 74 GTGCATGTGTAGTACTAGTTATTCAGCAGGCTGAGTTGAGAGGATTACTTGAGCGCAGGAGTTTGAGGCTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.......x.:..:..:.:::x........::xx.x.:.x:......:.x...:..:..x:........ 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 52078368 NA +3224 chr4 + 190214555 128113310 128113309 128113369 60 AAGAAGCCATTTGATTTTTTTTCTTTTTCTTTTCTTTTTTTCTTTTTTTTTTTTTTTGAG chr4 + 94230402 6748390 6748389 6748449 6748390 6748389 6748449 60 AATAAGGCATTGGATTTTTTTTTTTCTTCTGTGGTTTTTTTCTTTTTCCTTTAATTTAAG ..x...x....x..........:..:....x.xx.............::...xx...:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 121364920 68849635 +11553 chr4 + 190214555 128114543 128114542 128114757 215 AACTATAGAACTAACTTAAAATTTTAGAGTCTGCCCCAAATTCTCCAAGAATTGGAAGCCCATTGAGCCCAAAGAAAAACAGTGAAACAAGTATTCTTCAAGCAATGTCTAGAGGTTTGTCTACCAGTTTGCCTGACTTGGACTCAGAACCTTGGATAGAAGTTAAAAAAAGACATCAGCCAGCCCCAGTGAAATTGAGGGTAAGTTGTTACAGA chr4 + 94230402 35557621 35557620 35557835 35557621 35557620 35557835 215 AACTGAACTACTGTTTTCCAATGCTAGAGTCTGCACCAAGTTCTCCAGGAATGGGAAGCCTGTTGAGTCTGAAGGAAAACACTGAAACAAGTAATTTTCAGACAATATCTAAAGGGTTGTCTACAAGTTTGCCTGATTTGGACTCCGAACCTTGGATAGAAGTGAAGAACAGGCATCATGCATCCACTGTCAGAGTAAAGGTAAAATGAGAAAGA ....:x.xx...:x:..xx...x:..........x....:.......:....x.......::.....:.::...:......x...........x.:....::....:....:...x........x...........:........x.................x..:..x..:.....xx..x..x.x..x.:.x.:.:.....:x..xx.x... 215M 164/215 76.3% 215/94230402 0.0% 0/215 0.0% 92556922 NA +3160 chr4 + 190214555 128116881 128116880 128116935 55 TTCACATTCTTTTTATCAAGTGATTTTTTTTTCCTCTTGAGTTTTTTTTTTTTTT chr4 + 94230402 33362377 33362376 33362431 33362377 33362376 33362431 55 TCCAGACTCTATTTGGAAGGTAATTTTTTTTTTCTCTTGATCTTTTTTTTTTTTT .:..x.:...x...:xx.:..:..........:.......x:............. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 94754504 NA +19777 chr4 + 190214555 128121801 128121800 128122200 400 ATAAATTACCAATTTCTTCCTTCAGGAATCAGTGTCTGTCCCTGA---AGGGTCA--TTAA-ATCAGCTATGTTC---TTCAGAAGAACCAGAACAAGAAGAACTTGATTTTTTGTTTGATGAAGAGATTGAACAAAT---AGGACGAAAAAACACATTTACTGATTGGTCTGATAATGATTCAGATTATGAAATTGATGACCAAGACTTAAACAAGATTTTGATTGTAACTCAGACACCACCTTATGTGAAAAAACATCCTGGAGGAGATCGAACAGGCACCCACATGTCTCGGGCAAAAATCACATCTGAACTTGCTAAAGTTATCAATGATGGCTTATACTATTATGAACAGGATCTATGGATGGAAGAAGATGAAAACAAACACACAGCCATAAAGGTAATTGTTTCT chr4 + 94230402 35558280 35558279 35558686 35558280 35558279 35558686 407 ATGCATCACC--TTTTCTTATTTAGGAATGCGTTCCTATACCTGATCAAGTGTCAGGTCAACAACAGCCACCTCCACCTCCAGAGGAACAAGAACAAGAAGAACTTGACTTTTTGTTTGATGAAGAGATGGAACAAATTCAGGGTCATAAGAATAAATTCACTGATTGGTCAGACAGCAGTTCAGATTATGAAATTGATGATCAGGATGTAAACAAGATTTTGATTGTAACACAGACGCCACCATATATGAGAAAACATCCTGGTGAAGATCGTGCTGGCAACCATGTGTGTCATGGAAAAATAACATCGGAACTTAAAAAAGTTATTAATGATGGCTTATACTATTATGAACAGGATTTGTGGACAATGCAGAGTGAAAATGACCCTCCAG---TAATGGTAATTCTTTTT ..:x..:...--...::.:x..:......xx..x:..:.x.....---..x....--.:..-.x....:.:x.:.---.:....:....x..................:....................x........---:..x.:x..:..:.x...:...........x..:.::::.....................:..:..:x......................x.....:.....x...:...:............x.:......x:.x....x...::...x..:x.x......x.....x......:xx........:..............................:.:....:::x:x.:::......::.x.x:x...---...x.......x...:. 10M2D33M3I7M2I4M1I13M3I60M3I251M3D17M 308/395 78.0% 407/94230402 0.0% 17/395 4.3% 92563521 NA +3180 chr4 + 190214555 128129213 128129212 128129297 85 TGCGTGGTGGCGCGTGCCTGTAGTCCCAGCTACTGGAGAGGCTGAGACAGGAGAACAGATTGAACCCGGAAGGCGGAGGGTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:::....:..::.--......:.........x..:........x.xx.x...xx:x........:....x:xx:..x..:.. 16M2D67M 57/83 68.7% 83/94230402 0.0% 2/83 2.4% 52096018 NA +3035 chr4 + 190214555 128137725 128137724 128137803 79 TATATACATACACACATTATATATATACAGAAACGTGTGTGTATACATATATATATATATATATATATTTTTTTTTTAG chr4 + 94230402 82013216 82013215 82013294 82013216 82013215 82013294 79 TGCATAAGAACACAAACTTTGCACAGTAAAATTTGTATATGTATGCATATATGCATGTATACATATATCTCCTTTTTAG .::...x:x.....x.:.x.::.:.xxx.:.xx:..:.:.....:.......::..:....:......:.::....... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 46124509 NA +3619 chr4 + 190214555 128138817 128138816 128138886 70 CATGGTGGTAGGCACCTGTAGTCCGAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.....--....x......:.x.........::........x.x..x...x.:........::.:.. 9M2D59M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 52105620 NA +3893 chr4 + 190214555 128139353 128139352 128139444 92 CATAGTGCTGTGCACCTGTAGTCCCAGCTATTCTAGAGGCTAAGGCAGGAGGATCCCTTGAGCCCAAAAATTCAGTGCTGTAGTGTGTGATG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..:....--......x......:.......:.:x.:.....:..x.xx.x.:.x.x.....:....:..::.:x.x.......x:::..... 7M2D83M 64/90 71.1% 90/94230402 0.0% 2/90 2.2% 52106156 NA +3137 chr4 + 190214555 128148291 128148290 128148373 83 CGTGGTGGTGGGCGCCTATAACCCCAGCTACTTGGGAGGTTGAGGCCGGAGAATCTCTTGAACCTGGGAGGTGGAGGTTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--.:..:::...........::...:....x..x.x...x.x........::.:..x.xx:..:..x.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 52115094 NA +3193 chr4 + 190214555 128150138 128150137 128150182 45 AAGACTCCATCTCAAAACAAAACAAAACAACAACAACAAAAAAGG chr4 + 94230402 80206918 80206917 80206962 80206918 80206917 80206962 45 AAGAGTCTACAGCAAAACAAAACAAAACAACAACAACAAAAAAAG ....x..:.:xx...............................:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 47943220 NA +6719 chr4 + 190214555 128162184 128162183 128162325 142 TCTACTTCAGCAAGAAGTTGAGAACTTTAAGAAGCTAAATCTCATTAGTAAAGAGCAGTTTGAAAACCTAACACCTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGTATGTAA chr4 + 94230402 35560546 35560545 35560687 35560546 35560545 35560687 142 TCTAATTCAGCAAGAGGTTGAGAACTTCAGGAAGCTAAATCTTGTTAGTAAGGAAGAATTTGATCATCTTGCACCAGAATTGATTGCTGATCGAACCCAAGAAATTCTTCCAGGTTCTTCAGAGTTACAGAAAGGTAAGTAA ....x..........:...........:.:............::.......:..:x.:.....xx.:..x:....x...:.xx:.x:...x.x..x.......:...:.x:..xx:.....x...:xx:.x......x.... 142M 103/142 72.5% 142/94230402 0.0% 0/142 0.0% 92601638 NA +3061 chr4 + 190214555 128166898 128166897 128166994 97 ATCTCCTTTTTTAAAGGCTTAATTATAT-TCTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA chr4 + 94230402 81722743 81722742 81722840 81722743 81722742 81722840 98 ACTTTCTTCACTTACGACTAACTTCTGTCTCTATTTTACCCCTTTCTACTCTTCTATCTTCTTCAGTTGTTCTTTATATACATATATATATGTATGTA .::.:...:x:.x.x.:..x.x..x.:.-......:.x:.:..:...x::::...x...:::..xx.:x:...:......:..........:...:.. 28M1I69M 61/97 62.9% 98/94230402 0.0% 1/97 1.0% 46444155 NA +3400 chr4 + 190214555 128166923 128166922 128167011 89 TATTCTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATACACACACACATATATAT chr4 + 94230402 4618340 4618339 4618426 4618340 4618339 4618426 87 TGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT---TATATAT .:..:.x:.:...:x:x.::.x.......::..............x:....::......x.x......-....x.:.:.:---....... 68M1I11M3D7M 62/86 72.1% 87/94230402 0.0% 4/86 4.7% 123548583 66665972 +3184 chr4 + 190214555 128166930 128166929 128166992 63 TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA chr4 + 94230402 4618345 4618344 4618407 4618345 4618344 4618407 63 TTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ....:...:x:x.::.x.......::..............x:x...::......x.x...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 123548585 66665970 +3473 chr4 + 190214555 128166930 128166929 128167079 150 TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACA------------------------------------------------------------TATATACATACACACGTGTGTACGTATATATAC-ACACACACACACATATACACACACACACACAT chr4 + 94230402 4618343 4618342 4618551 4618343 4618342 4618551 209 TTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtat ..:...:...:x:x.::.x.......::..............::x...::......x.x......-::.:.x.:....-....:.------------------------------------------------------------......:...:.:.:....xx:xx..:......-.:...:.:.:.......:.:.:.:::.:::.. 65M1D12M1D6M60I33M1I32M 101/148 68.2% 209/94230402 0.0% 63/148 42.6% 123548587 66665968 +3405 chr4 + 190214555 128166945 128166944 128167015 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.......:.:....:.:.:.:::....x:x:.x...:..x..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 67335415 NA +3667 chr4 + 190214555 128166947 128166946 128167036 90 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATA---TACATACACACGTGTGTA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATA ...x.....x.............x.:.......:.:....:.:.:.::.....x:x:.x...:..x:....:---.:::::..:::....:.. 72M3I18M 61/90 67.8% 93/94230402 0.0% 3/90 3.3% 67335417 NA +3968 chr4 + 190214555 128166949 128166948 128167019 71 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............:.:.......:.:....:.:.:..:.....x:x..x...:.:x..... 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 67335419 NA +4539 chr4 + 190214555 128166951 128166950 128167039 89 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATATA-----CATACACACGTGTGTACGT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x...........x.:.:.......:.:....:.:....:.....x.x..x......x....-----::.:.:..:.......::. 70M5I19M 68/89 76.4% 94/94230402 0.0% 5/89 5.6% 67335421 NA +4004 chr4 + 190214555 128166953 128166952 128167046 94 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATATACATACACACGTGTGTACGTATATATA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC-TGTGCGCATGTGTGTATA ...x.....x.........x.x.:.:.......:.:....:......:....:x.x..x.:.:..x..:..:xx.-:...:.:.:..:.:.... 75M1D18M 66/93 71.0% 93/94230402 0.0% 1/93 1.1% 67335423 NA +3471 chr4 + 190214555 128170833 128170832 128170892 60 TTAGGTCAACCTTTTTATTATTCATTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTGGC chr4 + 94230402 56907954 56907953 56908013 56907954 56907953 56908013 60 TCAAGTCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGC .:.:...x...:...:x.:x.:...:....:.:...:..:...........:........ 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 71262879 NA +3643 chr4 + 190214555 128176073 128176072 128176170 98 TGTCTCTGTCTCTCTCTCTCGATATATATATATACACACATATATATACACATATATGTGTGTATATATATTTATATTATATATATAAATATATATAT chr4 + 94230402 60831532 60831531 60831621 60831532 60831531 60831621 90 TATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTC--------TAAATACATTTATATGGTCTGTGCGCATGTGTGTAT .:..................x:.:.......:.::.:...:.:.:::....x.x--------..x...:........x:.x.:.:::x..:.:.:... 54M8D36M 62/90 68.9% 90/94230402 0.0% 8/90 8.9% 67344541 NA +3860 chr4 + 190214555 128176100 128176099 128176192 93 ATATATACACACATATATATACACATATATGTGTGTATATATATTTATATTATATATATAAATATATATATTATATATAAATATATAAATATA chr4 + 94230402 90424142 90424141 90424234 90424142 90424141 90424234 93 ACATATAGACATGCATACACACTCACGCAATTCTCTATATATTTCCATAATGTATGTACAAATGTATATCTTATATATATATAATTAAACGTA .:.....x...:::...:.:..x..:::.xx.x.x.......x.::...x.:...:..:....:.....x.........x...xx....::.. 93M 64/93 68.8% 93/94230402 0.0% 0/93 0.0% 37751958 NA +10499 chr4 + 190214555 128178417 128178416 128178705 289 TTTTTATTTTGCAGATTTGACTGATGAATTAGCTCAGAAGTTATTTGATGTTTCAGAAATAACTTCAGCAGCAATGGTTCATTCGTTGCCTACAGCAGTTCCAGAATCTCCTAGAATTCATCCTACAAGAACACCCAAAACACCTCGAACACCTAGGTTACAAGATCCTAACAAAACACCAAGATTTTATCCTGTTGTTAAAGAACCAAAAGCCATTGATGTAAAGGTATACAAAACAACCAGGAATATAAGGCTTGCATTTTGTATCCTTTAACAT------------TACAGAATGAAA chr4 + 94230402 35561463 35561462 35561743 35561463 35561462 35561743 281 TTTCTTCTTTGCTGATTTAACAGAGGAACCAGCTTGTAATTGGTTCAGTACTGGAGCACTTCCAGCAGCAACAGTGGCTCGGTCACTGCCAACTGTAGTTCCAGAATCTCCCCGAGTTCACCCTGGTTTCACCCTGCGAACACCTCGCACCCCGAGGCTACAGGATCCCAACAAAACACCCAGGTTTTACCCTGTCGTTAAAGAAGCACAATCCATTGATGTGAAGGTAAATGGA--------------AAGGCTTA------ATATCTTTTAAAATCTATGGAAAGCCTACAGAATGTAA ...:.x:.....x.....:..x..x...::....::x..x.x:..:::.::.xx..x.x.xx.xx.....:..:...:..:x..::....x..x.:...............:x..:....:...:xxxxx..x.:xx:.........x..x..x...:....:.....:...........x..:.....:.....:.........x..x..x..........:......x.:::.--------------.......:------:....:.....x..------------.........x.. 235M14D8M6D14M12I12M 193/269 71.7% 281/94230402 0.0% 32/269 11.9% 92616954 NA +8210 chr4 + 190214555 128179382 128179381 128179515 134 AATGCTTGACTTTATTTTCTTTAGAGTCCAAGAAAGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCTCTGTCAGGTA chr4 + 94230402 35562047 35562046 35562178 35562047 35562046 35562178 132 AATGCTTCATTTA--CTTCTGTAGGCTCCAAGAAAAAGAAAAACGCGGCACAGTACAAATCCTCCGTTAGAATGCCATGTCGGTTGGGTGATGGATTCCAGAGACCACAGGCCAAGAACTTCCTCTGTGAGGTA .......x.:..x--:....x...:x.........:........:x....:..:........:..x:....:..:.....:........:................:::.....:....x........x..... 13M2D119M 107/132 81.1% 132/94230402 0.0% 2/132 1.5% 92617335 NA +3117 chr4 + 190214555 128189307 128189306 128189391 85 TGATACAAGTATGGCTACTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCCATTTGCGTGGAATGT-CTTTTTCCATTCTTCACTTT chr4 + 94230402 12458884 12458883 12458969 12458884 12458883 12458969 86 TGGCACAAATAGAGCTGCTTTTTTTTTTTTTTTTCTTATTAATTGCTTCCTGTAGTTTAACATTTACTCTTAACATTTTTTCCCTT ..::....:..x:...:.................:..x..xx........xx.x.:x.::x..x.-..:..xx....:..:x.:.. 65M1I20M 59/85 69.4% 86/94230402 0.0% 1/85 1.2% 115730423 74484132 +3348 chr4 + 190214555 128193154 128193153 128193240 87 TTTGTTATT-ATTTTTCTTTAGACAGTTATGTGTACATGTATATACACATACATATATGTGCACATGTGCATACACACATACACACAT chr4 + 94230402 85834528 85834527 85834615 85834528 85834527 85834615 88 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.....-....x.x.:.:x:::xx.:.....::..xx..:..x:.........:.:x::......x:..:............... 9M1I78M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 42358626 NA +3170 chr4 + 190214555 128193187 128193186 128193239 53 ACATGTATATACACATACATATATGTGCACATGTGCATACACACATACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .::...:...:....:....x....x:..:....:..:...:...:....... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 104945465 85269090 +3416 chr4 + 190214555 128196379 128196378 128196461 83 CATAGTGGTACTTGCCTGTAGTCTTAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCCTGAACCCAGGAGGTTGAAGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......:.x:.--......:::.........::........x:xx.x.:.x::.:.........:..x..x::....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 52163182 NA +12256 chr4 + 190214555 128199427 128199426 128199610 184 TTTCTCAAACAGCACTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTACTCCTCATTCATTCCCAAAGTTCCAGCATCCTTCTCATGAACTTTTGAAGGAAAATGGCTTTACCCAACAAGTGTACCACAAGTATCGTCGAAGATGCCTAAGTGGTAAGATGCTT chr4 + 94230402 35562696 35562695 35562879 35562696 35562695 35562879 184 TTTCTTTTACAGCAGTTCCAATGCTTCACCTTCAGAAGGAGCTCCACTTGCAGGAGGTTATGGTTGTACTCCAAATTCTCTTCCAAAATTTCAGCATCCTTCTCATGAACTGTTAAAGGAAAATGGCTTTACACAACAGGTGTACCATAAGTATCATCGAAGGTGTCTAACGGGTAAGCCACTT .....:xx......x...x....................x..x.....x......:.......x........xx....x:.:.....:..:....................x..:.................x.....:........:.......:......:..:....xx......x::... 184M 154/184 83.7% 184/94230402 0.0% 0/184 0.0% 92636731 NA +11933 chr4 + 190214555 128200514 128200513 128200687 174 TTTTCAGAGAGAAAACGCTTGGGAATTGGTCAGTCCCAAGAAATGAATACCCTCTTTCGTTTCTGGTCCTTTTTCCTCAGAGATCACTTCAATAAAAAAATGTATGAGGAATTTAGACAACTTGCTTGGGAAGATGCAAAAGAAAATTACAGGTCAGATATTTTCTTTTACACT chr4 + 94230402 35563295 35563294 35563468 35563295 35563294 35563468 174 TTTTCAGAGAGGAAACGGTTGGGAATTGGCCAGTCCCAGGAAATGAACACACTTTTTCGTTTCTGGTCCTTTTTCCTGAGAGATCACTTCAACAGGAAAATGTATGAAGAATTCAGACAACTTGCTCTAGATGATGCAAAAGAACACTACAGGTATGAGGTTTTTCTTGGAACT ...........:.....x...........:........:........:..x..:.......................x..............:.::...........:.....:............:x:..x............x.:.......xx..x:....::..x:x... 174M 146/174 83.9% 174/94230402 0.0% 0/174 0.0% 92637219 NA +3255 chr4 + 190214555 128203294 128203293 128203381 88 AAGTGCTTGACAAATGATTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTTCTTTTCTTTTTCCTCCCTCCCTCCCTTCCTTT chr4 + 94230402 35385221 35385220 35385308 35385221 35385220 35385308 88 AAGTATCTGTCATTTCATAATCTACATGCCCCCTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTT ....:::..x..xx.x..xx:..x:x.x..:..::.......:...:....:....:....:.......x::::xx...:...::... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 92818073 NA +3051 chr4 + 190214555 128203313 128203312 128203363 51 CCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTTCTTTTCTTTTTCCT chr4 + 94230402 56436027 56436026 56436077 56436027 56436026 56436077 51 CTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTTTTTCCT .::.:.:.::.....:...x...x...:...:.....:....:........ 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 71767286 NA +7700 chr4 + 190214555 128206406 128206405 128206541 136 ACCTTTTATTTTCTCTTTATAGGTATGGGTTAGAATGTCTGTTCAGGTTTTATAGTTATGGACTGGAAAAAAAATTCAGGCGAGAAATTTTTCAGGATTTCCAAGAAGAAACCAAAAAAGACTACGAATCTGGTAA chr4 + 94230402 35565375 35565374 35565508 35565375 35565374 35565508 134 ACCTGTT-TCTTCTCTTC-TAGGTACGGGTTGGAATGCTTGTTTCGATTTTACAGCTATGGCCTAGAAAAGAAATTCAGGCGAGACATATTCAAGGACTTCCAGGAAGAAACAAAGAGGGACTATGAAGCTGGTAA ....x..-.:.......:-......:.....:.....::....:x.:.....:..:.....x..:.....:..............x..x..:x....:.....:........x..:.::.....:...x....... 7M1D10M1D117M 107/134 79.9% 134/94230402 0.0% 2/134 1.5% 92641031 NA +9644 chr4 + 190214555 128207183 128207182 128207430 248 TAGGATTATATTTAATGTGAATAATTTTTAAAATTTCATATAATTCATAATGTATATTATTCTTTGTTATTAGGTCAGCTGTATGGACTAGAAAAGTTTTGGGCTTATTTGAAATATTCTCAATCTAAGACACAGTCTATTGACCCAAAACTTCAGGAATACCTCTGTAGTTTTAAGAGGTTAGAAGACTTCCGTGTTGATGTAAGTTTTAAGTCATTTCCTCTATTCTTTTTATTATCCATATATTT chr4 + 94230402 35565673 35565672 35565908 35565673 35565672 35565908 236 TAGGTTTTTAGTTAA---GTGTGGCCTTTGTAAATTGGTAAAATT--------ATCTTCTTTTTT-TTATTAGGTCAGCTTTATGGACTGGAAAAGTTTTGGGCTTACCTAAAATATTCTCAGCACAAGACACCAGCCATTGACCCCAAGCTGCAAGAATACCTCAGTAAATTTAGGAGACTGGAGGACTTCAGAGTGGATGTAAGTTTCAACACCTATTTTAAGTAATTTGGCTTATCTGTATTTTT ....x..x..x....---.x:.::::...:x..x..x:..x....--------..x..x..:...-..............x........:.................::.:...........::x:.......x:x.:........x..:..x..:.........x...:x....:...::.:..:......x.x..x...........:..xx.x.x.::.xx:.xx...xxx.....::...x... 15M3D27M8D12M1D182M 172/236 72.9% 236/94230402 0.0% 12/236 5.1% 92641510 NA +3046 chr4 + 190214555 128209291 128209290 128209350 60 TGCGCCTCTACTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCAAAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x.x..x.:...........::........x.xx.x...x.:.........x:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 52176086 NA +3442 chr4 + 190214555 128261864 128261863 128262023 160 AGTTCAGAAGTATCCTTAAAAAAAAAAAAAAAAAAACAAACAAACCAAAACCACACAGCTATCTATACCAATTCTAAGTTAATTTGGACTAA-ACAAGATCTTATTAATAGCAAAGGATAATTGAAATCCCAAACTTA-TAAGGTTTTCAACAAAAGTAGAG chr4 + 94230402 56861070 56861069 56861220 56861070 56861069 56861220 151 AATTAGAGAACATCCATTAAAAAAAAAAAAAAAAGAGAAACAGCCTAAAACCAGACAGC-------ACAAGTTTCAAA--AATATATCTTAATGCAAAAATATATAATTAGC--AGTAGCATCACATTACCATGCTTATTAAAGTCTTCAATAAGGAAAGAG .:..x:::.::....x.x................:.x.....:x.:.......x.....-------..x.:..::..:--...x.:xx:...-:...:.x:x...x.x....--..x.xx..::x.x.x...x:....-...:..:.....:..:::x.... 59M7D12M2D12M1I19M2D24M1I23M 100/149 67.1% 151/94230402 0.0% 13/149 8.7% 71400794 NA +3015 chr4 + 190214555 128261881 128261880 128261926 46 AAAAAAAAAAAAAAAAAAACAAACAAACCAAAACCACACAGCTATC chr4 + 94230402 77634789 77634788 77634834 77634789 77634788 77634834 46 AAAAAAAAAAAAAAGAAAACAAGCAAACAAAAGTCATACAGAAATC ..............:.......:.....x...::..:....xx... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 50627092 NA +45965 chr4 + 190214555 128270034 128270033 128271421 1388 TTTCATTTCCAAGATTTTT---CCTTATCTTGAATCAAATGCACAATCTTACAACTGTATCATAAT---GCACTGGCTTACAGTTCTGTATATAAAGTCCAACTCAAGCTTATTTTGGTTTATTGTACATGCTTTATTAAAATGGTACTTGTATTTACAGTATCTGCAGAAAGAGTCCCTTCCAAGGCCTCACACATTCAGACA--CATCCATACTGACACCCACTCCACAGCCCCATGCACCCACACCAGTGAGATGTGGAGGGTCAGACTCCTAAAATTAGGCAGCTGTTGG----GGATAAGAGTTGATTTGTTTTTCAATTTTTTTGAAAACAGAAAAGCATGGGGGAATGCATTTGGCCATTACAATGCTAATT-GAGTTTGTGTA-TATTACATATATGGCAGTTAACACTGTAATATTCCT--TTTACATTCTATATACACAGAATGATATCAAGGTTTTATGGTCAACAGAATATTCCAACTTCAGTCTTAATGCTGCT-TGTAGTGATTTCTGAATTCATTATAGGGGCTTTCCCTAAAAATAATTCAAGTCTATGTTAAGTGAAATAAGGCACAATTAATATT-GATTTGATTTAGGGAAAGGGAAGGAAAGAGAAGGGATAAAAACTGGTTTCAAATGATCTTT-CTGTTGGGGAACTAGCTCTGACTTAAACCCACCTGA----------AATT----CCTTCTCCTAATTTCCAAAGATTTCT-TTATAAAGATATTTTTCTTTTCC----CTGACAAAGCCAAA----AAGAAAAGTTTGGGAATTCACATTTTAAT----GTTTCAGTAGCCTGAACAACTCAAATTGATGTGTACCCCCACCTCCCCTGATCAGGTCGCCTCCCTCACCCATGTTAAAATAAAAACACAGTATGTGACACAGGAGTCCCTTGATGTTTCTTGAGGAGATCTGTACACTTGAGTAGCAAATACATATCT---GGTTGTCTTCAATATAT----TTTAAAAAGAAAGAAAGAGAAAGAAGAAAGGAAAGAAGGAAAAAAGGAAGGAAAGAAGTAATATTGTGACTTTCTTGCTCTTTAAAAAAATCCCTGTCTCCTTCTTTTCAGGATGATGAAGCCCCACTAGACATTACAAACAA-CTGCAACAAATGAGTTTGGCAGCATAAATAATGTCTAGTTATTCAAATCTTCA-TAGTGAGATTA--ATTTATCTTGTACACAATTTGTTGAATGTTTTTCGCAGCAGGTGAATCAAACCCAAAGACTCCGGACAGTCTGTGAAAGGGAGTAAGAA-TTGCAGTTCTGAAGGCCCCTGACTTTGGTTGTTTACAAAGTTCAATCCTGTTTATTGTGATCCTTGGTATCTTCTTCATCTGTATATTCTGATGGTTCTTCTCCTGGTTTTAGGAGTCTGCCTACATAATCATATTTTTCTGAAAGA chr4 + 94230402 35573328 35573327 35574635 35573328 35573327 35574635 1308 TTTCATATCCAAGACTTCTTCCCCTTACTTTG--------------TCTTCCA------TCATATTCCAGCTCTGCTTGACAGCT-TCTACATAGAGTCTAAC---AGCCCATTTGG---TATTGTACATGCTTTATTAAAATGGTACTCGTATTTACAATATCTGCAGAAACAATCCTTCTCAAGTCTT---GCATTCAGACAGACACGCACACAGACACACGCGCGCACGCCCCTT-----CACTCCACAGGGGTGTGAAGGCTATGCTCCCAAAAGTTAGGCAGCTTCTGGAAGAGGAGGAAGGGTGACTTTTTTTTTTTTTAAATTACGTAAAAAGAAGCGTGGGAGTATGCATTTGGCCATCACAATGCTAATTTAAGTATATGTAGTATTA-ACATATGGCAGT-AACACTG-AGTATTCCTCTTTTACATTCTATA--CACAGAATGACATCAAGGTTTTCCAGTCAACAGAACATTCTAACTTCAGTCTCAATGTTGCTATGTAGTGACTATGAAA--------GAGGGCTTTCCCTTAAAACAATTCAAGTCTATGC-AAGCGAAATAAGGCACAATTAATATTTGATTTGATTCAGACGATGGGGAAAAAAGGAGTGGGAGGGAGGCAGGCTTCAGATAATAGTTGTTGAAGAGAAAATAGTTTTACCC--AATCCTTTTGAGAAAAGGATGAATTTTACCCCCATCCTGATCTACATGGACTTCTCTTAGAGAACTGAAGTATTCTGCCAGGGCTACTAAGGCCCACGTACAAAACAAAATTGGGAATTCACATTATAACACCAGTGTCAGTAGTCTAACCTACTGATACTGATGTACAT------------------GAGCACATCTTTCTTTAATGCTGAAGGAGAAGACAAACATGAAACAA--------------GTTTC------AAACCTTT-CACTGAGCTTGAAGACTCACATCTTTAGAGAGTTTGTAATATATGCTATTTGAAAAG-------GCTTCAGCTTACTGATAAAAAGGAA-------------------------TAGCGTTTTTGCCTTT-----AAATCCCTGGCCCCTCTTC---------ACTAAGCTTTACCAGACATTACAAATAAACTGCAACAAA-AAGTTTGGCAGCACAAATAATGTCTAGT-ATTCAAATCTTCAGTTGTGACTTTATTATTTTCCTTGTACAAAACCTGTTGAATGTTTTTCGCAGCAGATGAACTGTACCCAAAGATGCAGGACATTCTGTGATGGGGAATAAGAGGTTGCAGTTCCGAAGGCCCCTGACTTTGGTTGTTTACAAAGTTCATTCCTGTTTAGTGTGATCCTTGGTATCTTCCTCATCTGTGTATTCTGACGGTTCTTCCCCTGGTTTTAGGAGTCTACCTACGTAGTCATATTTTTCTGAAAGA ......x.......:..:.---.....::...--------------....x..------.....x.---..x...x:.x....:.-.x..:...:....:...---...::....x.---.............................:.........:............x.:...:.::....x.:.---:..........--..:x..:..x.....x.:.x.xxxx.....x.-----...x...xx.:.:....:...x.xx.x::..x...:..........x:...----...x:.::.x...:..x.....:xx..xxx..:x:x.x.:.:....:....:.x..............:............-:...x.:....-.....-.:..........-.......-.:.......--.............--..........:...........x::..........:....:...........:....:....-........:.x:x:..--------::...........x....:..............:-...:......................-.........:..:x:.x...:.::....:::x....x::.::.x..:....:..:..xx..-:..xx.:.:..x...:.:.:x.:--..:..x::...----------....----..::x....:..:.x..x:..:....-...x.:.:x.:xxx.x:.:.x..----..:x:..:...x.x----..:.x..:x...............x...:----..x.......:..:.x.x...x.x.:......::.:------------------.:x.:.x..::..x::x...:.:..:x.:..:xxx.::...x:...x--------------.....------.:.:..x.-....x::x.x.x.:.:x..:....---.:xx..:.x:.......----...:.....-------.xxxx..xxx.xx.:x..:......-------------------------.::.x..:....::..-----.........x.:...::.:---------.:x....:::..:............:..-..........-:............:..............-.............-.x....xx...--....x:........x..::......................:....:::x.........:x.x.....x.......x:....:.....:-.........:..................................x.........x...................:........:........:........:.................:.....:..:.................. 19M3I10M14D7M6D7M3I16M1D17M3D11M3D70M3D11M2I32M5D51M4I81M1I11M1I5M1D12M1D7M1D9M2I13M2D62M1I16M8D34M1D26M1I61M1I23M2D11M10I4M4I26M1I23M4I14M4I29M4I36M18D47M14D5M6D8M1D24M3I17M4I9M7D25M25D16M5D19M9D28M1I10M1D28M1D13M1I11M2I89M1I147M 956/1250 76.5% 1308/94230402 0.0% 196/1250 15.7% 92696706 NA +12744 chr4 + 190214555 128272359 128272358 128272536 178 TACCTTTAAACTGCATTTCCCATTCTCGAACACTCTCCATTTGTACTGCATTCAAATCTGAGAGATCATCATATTCATCTCTAAGTGCATCTTTATCTAGGCAAAATGTGGCCAGTCCTCTGGAGGCATCCCTACCAGCAAATATTCCATATGGACCCGCTGGAAAAAAGAAAATAAA chr4 + 94230402 35575359 35575358 35575536 35575359 35575358 35575536 178 TACCTTTAAATTGCATTTCCCACTCTCTTACACTTTCCATCTGTACAGCATTTAAGTCCGATAGGTCATCATATTCATCTCTGAGTGCATCTTTATCTAGACAGAAAGTTGCTAGTCCCCTGGAGGCATCTCTGCCAGCAAATATTCCATATGGACCCTCTGAAAACAAAAAGACAAA ..........:...........:....xx.....:.....:.....x.....:..:..:..x..:.................:.................:..:..x..x..:.....:...........:..:........................x...:...x..:..:.:... 178M 151/178 84.8% 178/94230402 0.0% 0/178 0.0% 92697000 NA +7370 chr4 + 190214555 128272365 128272364 128272541 177 TAAACTGCATTTCCCATTCTCGAACACTCTCCATTTGTACTGCATTCAAATCTGAGAGATCATCATATTCATCTCTAAGTGCATCTTTATCTAGGCAAAATGTGGCCAGTCCTCTGGAGGCATCCCTACCAGCAAATATTCCATATGGACCCGCTGGAAAA-AAGAAAATAA--ATTATT chr4 + 94230402 16745317 16745316 16745496 16745317 16745316 16745496 180 TGAACTGTGACTCCCAGTCCCTTAAGGTCTCTTGCTGTGTAGCGTTGAGATCAGAGAGGTCATCATAGTCATCCCTCAGAGCCTCCTTATCCAGGCAGAAAGTGGCAAGACCTCGGGATGCATCTCTCCCAGCAAAAATCCCATACGGGCCATCTTCAAAATAAAAACATAAGCATTATT .:.....::x:.....x..:.xx.x:x....:xx:...::x..:..x.:...x.....:........x.....:..x..x..x..:.....:.....:..x.....x..x....x...x.....:..x........x..:.....:..:..xx..xx....-..:..x....--...... 161M1I10M2I6M 128/177 72.3% 180/94230402 0.0% 3/177 1.7% 111527048 78687507 +3110 chr4 + 190214555 128277023 128277022 128277086 64 AGTGG-GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....-....x......:...........::........x.xx.x...xx:.x......::.:.. 5M1I59M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% 52243823 NA +17748 chr4 + 190214555 128287343 128287342 128287853 511 GGTCCTTCCCCTCCCCTTCCAACTC----CTCACCCGGGCCGTAGAACTTGCTGCCTTTGGTCACGTCGAAGACTTTCCCATTGACCGCGAGCAGGATGCGCGGGTTGCGGGAGCCGTCGTACTGGCGCAGCTGCTCCAAGCTGAAGTCCCGCTTCTTCATGCGAGGCAGAGAGGTGGCGGGGCTCTCCTCGCCCGCCCCGGCCCCGGCCCCCAGACCCCGCCGCCCCCAGCGCACCCACAGCCGGTAGGCCCCCAGCAGCACCAGAGCCACCAGCGCCACGTTCAGCAGCATTTCCCCGCCCCCCG--TCAGAAGCGCCAACGCCGCCGCCGCCCAGCCTCCCCCTTCCGCTGCCGCTCCCGCGTCGCCTGGACTCTCGCTG-CCGCCGTCGTTGCTGCTCTCGCTGCCACTCCCCAGGGTGCCTAGCTTCACGTCCCCATCACCAGCCGCCATCACTGCCCGCCAGCGCCTTCCTCCTCCTCCCCGCCCC-------CTGCCCTCCCCAACCCCACGGCCGGC chr4 + 94230402 35587839 35587838 35588335 35587839 35587838 35588335 497 gggccgctcccgcctcccccgccgcgACGCTCACCAGGCCCGTAGAACTTGCTGCCTTTGGTCACGTCGAAGACTTTGCCATTGACCGCCAGGAGGATGCGGGGGTTGCGGGTCCCGTCGAACTCGCGCAGCTGCTCCAGCGAGAAATCCCGCCGCTTCATCCGCGGCAGCAGAGCGGCCTGGCTCTGCTGGGCCGCGCC--CCCCAGCGC----GCTCCGCTTCCTCCAGCGCAGGTACAGCCGGTAGGCGGCCAGCAACACCAGCGCCAGCAGCCCCACGTGCAACAGCATcccgccacccgccggctcccccgcgccgccgtcgccgccgc----tctccgcagtccttagccgccc-------------atccccgccgtccgccatcaccgccaggcccgcgcccgcccgccgccgccccacccctctcgggcccgcc-cccgcccccttcgcctctcgccg----cctccgATTGGTccccggcccgcgggcaccgcccacgccggcctcgcgccccgc ..x..x::...x..:.::..:x.x.----......x..x......................................x...........x..x........x..........xx......x...x..............:xxx...:......:x......x..x.....x:::.:...xx......x..x.x....x..--....:..x.----:.:....:x..:........xx:.............xx......:......x....x....x......x..:......::.x..:...x...--..xxxx.....:x..:.........----:....x.xx...x:x.....:.-------------.::.:...:.-.....:..:::..::xx.:...xx..:.:.x..:xx.:x..xxx.:..x..xx...::.-..x...x..x..:.:x.:....:----.:...xx:.xx......x...-------.:....x.x..::..:.:..x..x.. 25M4I171M2D9M4D92M2I25M4D22M13D10M1I59M1D23M4D21M7I26M 348/483 72.0% 497/94230402 0.0% 42/483 8.7% 92699504 NA +8000 chr4 + 190214555 128287398 128287397 128287739 342 GGTCACGTCGAAGACTTTCCCATTGACCGCGAGCAGGATGCGCGGGTTGCGGGAGCCGTCGTACTGGCGCAGCTGCTCCAAGCTGAAGTCCCGCTTCTTCATGCGAGGCAGAGAGGTGGCGGGGCTCTCCTCGCCCGCCCCGGCCCCGGCCCCCAGACCCCGCCGCCCCCAGCGCACCCACAGCCGGTAGGCCCCCAGCAGCACCAGAGCCACCAGCG---CCACG---TTCAGCAGCATTTCCCCGCCCCCCGTCAGAAGCGCCAACGCCGCCGCCGCCCAGCCTCCCCCTTCCGCTGCCGCTCCCGCGTCGCCTGGACTCTCGCTGCCGCCGTCGTTGCTGCTCTC chr4 + 94230402 16747218 16747217 16747530 16747218 16747217 16747530 313 GGTCACGTCGAACACCTTCCCGTTGACGGCCATGAGGATGCGCGAGTCGCGCAGGCCGTCGTAGGGCCGCAGCTGCTCCAGTGTGAAGTCGCGGCGTTTCATTTTGGGC--Agcggcggc-ggacccgcctcgcccggctgcgccgcgggccgctcgccccgcAGGATCTGGTAGAGCAGGAAGAGGCAGAGGCCCAGCAGGCTCAGGTTGAGAGGCGAGCCCACGATCTCCAGCAGCAGGCCACCCCCCTCGGT------------CGCCACCGCCTCCTCGCCCGC--------------------CATCGCCGGCTCCTCGGCGGCCATCGGCTCCGCTGCGCTC ............x..:.....:.....x..x.xx..........:..:...x::.........xx.x.............:xx.......x..x:x:.....x:x:...--..x..:...-..:.:.x.........x.:xx...x...x..x.xx:......x.xx:.::.::x.x.x:x.:xx..:..:xx........xx:...:x:x.xx:...---.....---.:........xx:.x..x...:.x..------------....:.....x..:x...:x.--------------------.:.....x.xx.:::x..x...::..x.x::.....x... 109M2D9M1D97M3I5M3I26M12D21M20D40M 205/307 66.8% 313/94230402 0.0% 41/307 13.4% 111540180 78674375 +3758 chr4 + 190214555 128304957 128304956 128305031 75 TATTATCACTATTTTACACATGTGGAAACTGAGGCACAATGATGTTAAGCCACTCTTCTAAGCTCACACAGCTAG chr4 + 94230402 82283118 82283117 82283192 82283118 82283117 82283192 75 TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAG ......x.::....:.:.....x........:.:....:xx.x:.....:x...xx:.....x........:... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 46021839 NA +3388 chr4 + 190214555 128312933 128312932 128313048 116 CATGGTGGTACGTGCCTGTAATTCCAGCTACTGGGAGGGCTGAGGCAGGAGGATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCATGCCACTGTATTCC---AGCCTG chr4 + 94230402 76033197 76033196 76033312 76033197 76033196 76033312 116 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ..::.....:.::.--....:...........x.:.:.......x.xx.x.:.x..........::.:..x:xx:..:..:..-:.xx...x::..x..x:x...:.x..---...... 14M2D67M1D26M3I6M 76/113 67.3% 116/94230402 0.0% 6/113 5.3% 52279736 NA +3312 chr4 + 190214555 128320448 128320447 128320525 78 TTTGTCTTTCTCTCTTTCCCCCCTCCTTCTCTCTCTCCCTCCCTCCCTCTTTCCTTCCTTCCCTCCCTGCTTCCCTCC chr4 + 94230402 2247936 2247935 2248013 2247936 2247935 2248013 78 TCTGTCCTGCCCCTTCTCCTCCTTCCCTCAGTGTGTCAGTCCCACGTCCTTTACTTGCTTCCCTCTCTGCTTCTTTCC .:....:.x.:.::.:...:..:...:..xx.x.x..xx....x.x::....x...x........:.......::... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 126072512 64142043 +3447 chr4 + 190214555 128320962 128320961 128321055 94 CTTAAAGATATATACATGTAAATTTAACAGATATGTACAGGTAGTTTTCTTATTGTTG--TTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTAACTC chr4 + 94230402 29689798 29689797 29689886 29689798 29689797 29689886 89 CTTCAGAATATTTCCA-GTAAAAGTTTCAGATTTCCACAAAT------CTTAGTGTTGGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAAATC ...x.::....x.x..-.....xx.xx.....x.x:...::.------....x.....--........x........................x.. 16M1D25M6D10M2I36M 70/87 80.5% 89/94230402 0.0% 9/87 10.3% 98631164 91583391 +3270 chr4 + 190214555 128320962 128320961 128321050 89 CTTAAAGATATATACATGTAAATTTAACAGATATGTACAGGTAGTTTTCTTATTGTTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTT chr4 + 94230402 54883337 54883336 54883424 54883337 54883336 54883424 88 CTAAGAGAGGTATA-ATGCACATTCAAATTCTATGGTGAGGTGGCTGTTGTTTTGTTGGGTTTTTTTTTTGTTTGTTTGCTTGCTTTTT ..x.:...x:....-...:.x...:..xxxx....xxx....:.:.x.:x.x......xx......x............:...:..... 14M1D74M 63/88 71.6% 88/94230402 0.0% 1/88 1.1% 73437625 NA +3143 chr4 + 190214555 128333343 128333342 128333400 58 AAAAAACAAAAACAACAAAACAACAACAACAACAACAACAAA-ACAAAAACAAAAAAAA chr4 + 94230402 59146014 59146013 59146072 59146014 59146013 59146072 59 AAAAAACAAAACAAACAAATCAGTAACAACAACAACAACAAACAGAAAAGCTGAAAGGA ...........xx......x..::..................-.x....:.x:...::. 42M1I16M 47/58 81.0% 59/94230402 0.0% 1/58 1.7% 69187329 NA +3599 chr4 + 190214555 128349251 128349250 128349351 101 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....--...:.x....:.:.........:.::........x.xx.x...x.:.........:.:..x:xx:..:..:..------:.x...:..... 8M2D73M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 52316054 NA +3316 chr4 + 190214555 128353528 128353527 128353610 83 CGTAGTGGTGAGCACCTGTAGTCCAAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGATCTCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.......--...x......:.x.........::........x.xx.x...x.:.....x.:.:.:..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 52320331 NA +3281 chr4 + 190214555 128372776 128372775 128372880 105 GCTGTTCCTGATTTCTTTC--TTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTTTCT chr4 + 94230402 7632351 7632350 7632457 7632351 7632350 7632457 107 GCCATTTTATATCCCTTTCATGTCCTTCCCTTCATCCCTACTGTCTCATTCCTTTTATTAATTGCTCTGCTTTTTTTCCTTCTGCCTTTTCCTGCCTTTCTTTTTCT ..::..::xx..::.....--x.:...:.....x.:...x..x...:x:.:::...x..xx..x..:.x:..:...:::.::.x:......:.x:............ 19M2I86M 66/105 62.9% 107/94230402 0.0% 2/105 1.9% 120740425 69474130 +3071 chr4 + 190214555 128398430 128398429 128398493 64 TATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834604 85834541 85834540 85834604 64 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA .:...x.:...............:.xx:...:x.:...:....:..x...:..:.x...::.:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 42563889 NA +3252 chr4 + 190214555 128398430 128398429 128398492 63 TATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x:..x.....x.................:.xx..:..x::...:....:..x...:..:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 42563897 NA +3011 chr4 + 190214555 128398432 128398431 128398493 62 TGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834602 85834541 85834540 85834602 62 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...:.x.................:.xx:...:x::...:....:..x...:..:.x...::. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 42563891 NA +3183 chr4 + 190214555 128398434 128398433 128398494 61 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834593 85834533 85834532 85834593 61 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT ...x::.x.....x...................xx..:..x::...:....:..x...:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 42563901 NA +3124 chr4 + 190214555 128398437 128398436 128398494 58 ATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 85834538 85834537 85834595 85834538 85834537 85834595 58 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ..x.....x.................:.xx..:..x::...:....:..x...:..:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 42563899 NA +3200 chr4 + 190214555 128398449 128398448 128398516 68 GTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATCACAGTTTCTTATATATATATC chr4 + 94230402 63625322 63625321 63625389 63625322 63625321 63625389 68 GTGCACGTGTGTGTGTGTACGCATATATGCAGGAACATAGGTATGCTACAGTTTCTTAAAGAAATATC ...:::..........:..:::......::.x:x.:...x:...:::...........x.x.x..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 64773127 NA +3198 chr4 + 190214555 128422441 128422440 128422559 119 CCAGCATCTGTTACTTTTTAACTTTTTACTAATAGCCATTCTGACTGGTGTGAGATAG-------TGTCTCACTGTGGTTTTGATTTGCATTTTTCTTTTCTTTTTTTTTTTTTTTTCAGACAGAG chr4 + 94230402 29935300 29935299 29935412 29935300 29935299 29935412 113 CCAGTCTTTATTGTTTTCT------CTGCTAACAGTTATT-------GTTTCAATTAGCCTTTGCTTTTTCAGAGTAGTTTTAGTTTGCTTTCTCTTTTGCTTTTTTTTTTTTTTTACAAATGGAG ....:x.:.:..::...:.------:.:....:..::...-------..x.x.:x...-------.x.:...xx..:.....::.....x..:.::...x................x..:.::... 19M6D15M7D11M7I61M 74/106 69.8% 113/94230402 0.0% 20/106 18.9% 98487141 91727414 +6685 chr4 + 190214555 128453418 128453417 128453735 318 ATTTTTGATACACCAGCTGATAATTG--GGCTATATCTGAGTCTAAAAATAACACATAGTACATTAAAATAATATTCCTTGGCTACAATTCCAAAGTGGTATTCTGGGATTTCTGTGCATTAATCCTGTAACAATAACAGGATTTGGGCTTTTAACTCCCCTGGTGTAGCTTTGAAAATCTAGCCTAAAGCAGCTAATGTTGCCGTTTAAATCATCC----TCTCACTATCCTTAGGGAAATGTGGAGA--TTAAAAAAATGACAGCCCAACTGCT--------CAAATGACCTATACCTGGGAGAA---TAAGAGAAACAACCTATTTCCTCTCAG chr4 + 94230402 35625558 35625557 35625881 35625558 35625557 35625881 324 ACTGTTGTAACACTGGCCAGTAATCACAGCCTACATT----------AATTCCAGAAAGTACACACAAATAATATTTCTTGGCTCCATTTTGAAAGCAGCATTTGGAAAGTTATTTGCACTAATCCTGTAACAATAACAGGATTTGTGTTTCCAGCGTA---AGCATAGCTTTGAAAATGTAACCGTAAGTGTCTAATGCAATAGTCGTAGTAATCCCTGACCTCATAACTTCTGTGAAAAGGGAGCAATTTTGCAGAAGTGTTTGCCTGTAAACTAGAGAAAAAAAATATCCTGTACCCTGTAGGATCCTCACAGGAGCAGTCTCTTTTTCCCTAG .:.x...xx....::..:::....::--.x...:..:----------...xx..x.x......:xx..........:.......x..x..:x....::.:...:x.::.x..x.x....:..........................x.:..::.:.x:x---:.::.............x..:..xx...::x......:x::x..:xx.:.x....----:....:x.::::.:x.:...x.x:.x:.--..:x.:..:..x:x...::xxx:..--------x....:x...:....:x.x..:.---.x.x..:.:..::..x...:::.::.. 26M2I9M10D112M3D55M4I28M2I25M8I23M3I27M 192/305 63.0% 324/94230402 0.0% 32/305 10.5% 92827860 NA +3936 chr4 + 190214555 128458339 128458338 128458408 70 CATGGTGGTGCACGTCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGCGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::...........--..:..:...........::........x:x:.x...x.:...........:.. 15M2D53M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 52425142 NA +3182 chr4 + 190214555 128511863 128511862 128511923 61 TTTATATATATATATATATATAAATATATATAAATATATATATTTATATAAATTTATATAT chr4 + 94230402 50293986 50293985 50294046 50293986 50293985 50294046 61 TTTAGGTATTTATAGGCATATAAATCTATATAAATATAGGTATTTATAGATATTTTTAAAT ....x:...x....x::........x............x:........x.x....x..x.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 78217877 NA +3416 chr4 + 190214555 128515304 128515303 128515373 70 CATGGTGGCATGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGCAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....--...:.x....:.:...........::........x.xx.x...x::...........x.. 8M2D60M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 52482107 NA +3940 chr4 + 190214555 128547810 128547809 128547892 83 CATGGTGGTGGGCACCTATAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCGCTTGAACCCAGGAGGTGGGAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x.:..:.:...........::........x.:x.x...x.:...........:..x.xx.:.:..:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 52514613 NA +19712 chr4 + 190214555 128553416 128553415 128553884 469 CTGGTGCTTATCTGAGCAGCGGGCGATTTTTCTGAAGTGACCTCCGCCGAGCGGGAGATTTATGGTGGCGTTTGCTTTCATTATGTGTGGAGGCTGCCTCGTGAGCTCGCTGCGTGGCTGTCGGAGGAAGAGCAGAACGCTTCCCAGAATAAGCCTCCGGTATTATCTTTGAACATATGTTCTTGATTAAATGAGAAGAGGAAAGTCTCTTCG-TTTTTTCCTATTTGGAGGTTAAAGTGGAGGGTTTCTCTAAAAACAGATTGCAGTAAATTGTGGGTTTATTTGAACAGTATGTCAACATTATTTACTCACGGTAAAAAAAAATCTCAAATTGATAGGTTTCTTTTAATTACCTCATCCTGAAAGCTGCTCTCAACAAAC-AGCAAATATTTCAGAAGCCATTTGGATAAGTCTGGAAATGTTGAATTATTGGAAACCTGCCGAGAATAATACCTTTGAAAATGTTTCC chr4 + 94230402 35648687 35648686 35649147 35648687 35648686 35649147 461 CTGGTGCTTCTTCCATCAGTAG-CTTTTTTTCTAAAGTGACCTCTACAATGCAAGAGATTTATGGCAACATGTACTTTCATTATATATCAGTGTTACTATGAAAGCTCATTGCATCTCTGTGAGAGGAAGAATAGA--GTTTCTCAGAATGAGCCTTCAGTATTATCTTTGTACATATGCTCTCTATTAAGTGAGATGAGGAAAGTCACTTAGCTTTCTTTCCATTTGAAGGTAAAATTGGA-GTCTTGTCTAAAAGCAGATTGTGGTAAACTGGAGGTTTATTTGAAAAATATGTCAACGTTATTAGCT-----TGAAAATATATACTAAATTGATAGATTTCCTTCAGTTACCTCATTTTGAAAGCTGTTCTCAATAAACAAGAAAACAGTTTAGAAGTGATTT-AATCTGCCTGAAAATGAGAAAATCTGAGGAAAGTATAAAGCACCATGTTTCTAAATATGACTTC .........x.::x.x...::.-.xx.......:..........::.x:x..::...........:::.:.x.:..........:.:.x::x.:.:.:x:.x:.....::...:.xx....x:........::...--.:...:......:.....:.:............x.......:...:x.....:.....x..........x...x.-...:..:.:.....:....x...x....-.x:..x.......:.......::.....:..x:............x.:.........:.....x:..-----.:....x.x..x::..........:....:..:.:.........::.........:......:....-..x...:.x..:.....:x....-:..xx.:...:.....xx:..x.x.x:.:..xx.::x:..x.:x..:::.:.:..x...x:.:. 22M1D113M2D75M1I28M1D67M5D67M1I23M1D64M 330/459 71.9% 461/94230402 0.0% 12/459 2.6% 92904729 NA +3224 chr4 + 190214555 128558263 128558262 128558341 79 GTGATGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGATTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.....:--......:...........::........x.xx.x...x::x.......::.:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 52525062 NA +3370 chr4 + 190214555 128569370 128569369 128569451 82 TATTCTCTCTCTCTGTCTCTCTCTCT----CTCCTGCTCTTTCTTTCTGT------CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601248 12601247 12601339 12601248 12601247 12601339 92 TATTGTCCCTCTGAGTTTCTCTTTGTGAGCCATTTATATTTAAATACTGTAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ....x..:....xx..:.....:.x.----.x::.::x:..xxx.x....------.........................:.......... 26M4I20M6I36M 63/82 76.8% 92/94230402 0.0% 10/82 12.2% 115968122 74246433 +3239 chr4 + 190214555 128569406 128569405 128569484 79 TTCTTTCTGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAAAGTGATAAAAAG chr4 + 94230402 75248047 75248046 75248125 75248047 75248046 75248125 79 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaag .:...:..x................x.x..............x.x.x.x.x.x.x.x.x.x.x.x...:x..x.:.... 79M 58/79 73.4% 79/94230402 0.0% 0/79 0.0% 53321359 NA +3602 chr4 + 190214555 128569410 128569409 128569484 75 TTCTGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAAAGTGATAAAAAG chr4 + 94230402 75248047 75248046 75248121 75248047 75248046 75248121 75 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaag .:..x:....................................x.x.x.x.x.x.x.x.x.x...:x:.x.:.... 75M 57/75 76.0% 75/94230402 0.0% 0/75 0.0% 53321363 NA +3002 chr4 + 190214555 128569415 128569414 128569449 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 115968110 74246445 +3124 chr4 + 190214555 128569415 128569414 128569449 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248054 75248053 75248088 75248054 75248053 75248088 35 TCTCTCTCTCTCTCTCTCACACACACACACACACa ..................x................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 53321361 NA +3253 chr4 + 190214555 128569415 128569414 128569453 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 53321365 NA +3396 chr4 + 190214555 128569416 128569415 128569484 69 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAAAGTGATAAAAAG chr4 + 94230402 75248049 75248048 75248117 75248049 75248048 75248117 69 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaag ..::...............x.x..................x.x.x.x.x.x.x.x.:..x:.x...... 69M 53/69 76.8% 69/94230402 0.0% 0/69 0.0% 53321367 NA +3102 chr4 + 190214555 128569418 128569417 128569453 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 115968114 74246441 +3023 chr4 + 190214555 128607171 128607170 128607221 51 CAAAAAAAAAATGAAAAAACACAACAACAACAACAACAACAACAACAAAAC chr4 + 94230402 49372040 49372039 49372090 49372040 49372039 49372090 51 CAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAAC ........x..xx........xx......:..:.........x..x..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 79235131 NA +3951 chr4 + 190214555 128612941 128612940 128613023 83 CATGGTGGTACACATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:...:.--.....:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 15M2D66M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 52579744 NA +3077 chr4 + 190214555 128614074 128614073 128614142 69 CCTTTTTATTATAAATACATATATGTATGTGTGTGCACATATATATGTACATATACACACACACACAGA chr4 + 94230402 86965319 86965318 86965387 86965319 86965318 86965387 69 CCTTTTGGGCATGAATGTATATAAATGAGTATGAGCACATAAAAATGTGCATATACACACGTATGTAAA ......x:x:..:...::.....x:.:x..:..x.......x.x....:...........::.:::.:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 41648755 NA +3814 chr4 + 190214555 128618705 128618704 128618778 74 GTGCACCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 52585501 NA +3944 chr4 + 190214555 128629394 128629393 128629472 79 GTGGTGCACGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...........--...:.:...........::........x.xx.x:..x.............:..x:xx:..:..:.. 11M2D66M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 52596193 NA +10676 chr4 + 190214555 128653431 128653430 128653813 383 CCCTGTCTTAAGTACAC-TGTTTATTCT-AAGAGTTGTGATAGGCTAAGGGGGGAAAAACCCCAAGTTTTATTGCTTTACAAGCCAACCACGTTAAGAGCATACATCTGCTTTAAAACTATACAATTTCTTTTCTAGTGCCCAAGTAGATTTGCTCTGGGCTCAAGCAGTTATTAAACCCCGGCGCT---GTCTCTGATAGCTGCAGTTTGCATTCCAAGCATGAGCACAGTGCTGGGGCAGGACAGGCTCGGCTCAGTC-AACAGATGTCAACTCCCCTTG----------------TAAACGCAGCTGCTCTGTCTCACAACTGGCAAAGAGAACTGAAGGAGTTCCCTTCCCTTTATGGCTTTTATCTCTCTGGCTAATAGGGGATGATGCTTAAAGGAGGT chr4 + 94230402 35673003 35673002 35673398 35673003 35673002 35673398 396 CCATGTGTAAAGCAGATGTATTTGTTCTTAACAGTTTAGATAGATTA----GGTAAGAGTACCTTATTTTATTGCTTTACAAACAAACAATGGTAAGAGCACACACCTGCGTTAAAATGACATGATTTCTTTTCTGGTGCTGAGACAGATTTGCTCTGGGCTCAGGTAGTTAACCAAACCTGGCCTTGAGGGTGCTGGTAGCTGCTGGTTACAGTGTCATTACAAGGACA-CACTGGATCAGGATAGGCTTGTCTCAGTCAAACAGATTTTAACTTGCTTTGAATTTTAAGAAAAAAAAAAAAAAAACAGCTCAAT-TTGTAGCTGGCTAAGGGTACTGATTGTGGTGGTTTTCTTGGCTGTTTTTTTTTTTTTTTGTGAGTA---GATGCACCTTTAGGGAGAT ..x...x.x...:.x.:-.:...:....-..x....xx.....::..----..x..:.::x..xx:................:.x...x.:.x........:...:....x......:x.:.::...........:....:x.:::..................:.:.....x:x..x..:...x:.---.x:x...:.......x.x..:..x.x:x.x:.::..x...-::....:x.....:.....:.x.......-.......x.:....:x.:...----------------x...x:x.:.x....x:.-.:::.:.....x...:.x.....xx.x.x.xx:..:.:.xxx..x:....x.:.:.:.x.:x.:..---....xxx...x.:....:. 17M1I10M1I18M4D136M3I40M1D29M1I21M16I18M1D66M3D19M 254/374 67.9% 396/94230402 0.0% 31/374 8.3% 92980428 NA +3246 chr4 + 190214555 128658690 128658689 128658817 128 GAACAGGGAGAAGGAAAAGGGGAAGGGGGAGAAGGGAGAAGGAGGGGAGAAGGGAGAAGGAGGGGAGAAGGGGGAAGAGAAGGGGGAAGAAGAGGAGTGGGGCAGGAAAAGGAGGAAGAGAGAGCCAA chr4 + 94230402 32265540 32265539 32265667 32265540 32265539 32265667 128 GAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGATCCAA ..:.xx..:......:..x.x:x:x.x:.x.:.:...::.::..:.::..::.....:......:......:::.x:.x.::.:::x..:xx..x..:x.:x:x.:..x..::::..::....x.... 128M 70/128 54.7% 128/94230402 0.0% 0/128 0.0% 96393150 93821405 +3185 chr4 + 190214555 128660015 128660014 128660093 79 GTGGTGCGTGCCTGTAGTCCCAACTACTCAAGAGGCTGAGCCAGGAAGATTGCTTGAGCTCAGGAGGTGAAGCCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--......:...:.....::.:..........xx.x::.x::.....:.:...:..x.xx:.x...:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 52626814 NA +3016 chr4 + 190214555 128662508 128662507 128662567 60 TCAGCTGATTAGCAATCTTAACTCCATCAATTACCTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 69637831 69637830 69637890 69637831 69637830 69637890 60 TCAGTTCACCTGCAACCTTAACTCCAGCAATAGTGTTTTGTTTTGTTTGTTTTTTTTAAG ....:.x.::x....:..........x....x::x....x....x...x........:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 59024677 NA +3151 chr4 + 190214555 128665182 128665181 128665272 91 CTCCACTTCAAAAAAAAAAAAAAAAAAAAAAGAGCTGGAAAGAAAAGAAAAGAAAACACTAAAAAAAAAAAAAAAAAGAAGAAGAAGAATA chr4 + 94230402 67222927 67222926 67223016 67222927 67222926 67223016 90 CTCCA-TTCTAAAAAAAAAAAAAAAAGTGAATTCTAAGAGAGAGAAGTAAAAATAACGGTTATTAAAAAAAAAAAAAAGATAAATGGAGCA .....-...x................:x:..xxx:x:..:...:...x...:.x...:x.x.xx.............::.x..:x:..::. 5M1D85M 62/90 68.9% 90/94230402 0.0% 1/90 1.1% 61442255 NA +3122 chr4 + 190214555 128665204 128665203 128665271 68 AAAAAAAAAGAGCTGGAAAGAAAAGAAAAGAAAACACTAAAAAAAAAAAAAAAAAGAAGAAGAAGAAT chr4 + 94230402 13176364 13176363 13176431 13176364 13176363 13176431 68 AATGAAAACAAGGAGGGAAGAAAAGAACAGTAAGCAATGAAAAAAAAAAAAACCCGAAGATGAGAAAT ..x:....x:..xx..:..........x..x..:..x.:.............xxx.....x..::... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 115488840 74725715 +3004 chr4 + 190214555 128665228 128665227 128665279 52 GAAAAGAAAACACTAAAAAAAAAAAAAAAAAGAAGAAGAAGAATAAGACAAG chr4 + 94230402 18806843 18806842 18806894 18806843 18806842 18806894 52 GAAAAGAAGACACTGAAAAAAAAAGGAGAGAAAGAAGATAGGATAAGACAGG ........:.....:.........::.:.:.:.::.::x..:........:. 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 109858385 80356170 +3230 chr4 + 190214555 128665229 128665228 128665280 52 AAAAGAAAACACTAAAAAAAAAAAAAAAAAGAAGAAGAAGAATAAGACAAGT chr4 + 94230402 41779132 41779131 41779183 41779132 41779131 41779183 52 AGAAGAGAACATTAAAAAAAAAGAAAAAAAGAAAAGAGAGGATGAAACATGT .:....:....:..........:..........:.:::..:..:.:...x.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 86886097 NA +3296 chr4 + 190214555 128667513 128667512 128667591 79 GTGGCGGACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.--...x......:.........:.::........x.xx.x...xx:...........:..x.xx:.x:..:.. 6M2D71M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 52634312 NA +3284 chr4 + 190214555 128674578 128674577 128674638 61 TTTTTTTCCTCCTTTTTGGTTTGTTTGTATTACTATAAATATTTCTTTTCTTTTCTTTTCT chr4 + 94230402 15817651 15817650 15817711 15817651 15817650 15817711 61 TTTTTTTTCCCCCCTCTGAGTTGCATCTGTTACTATCAAGATTGCTTTTCTTTTCTTTTTT .......:.:..::.:..:x...:x.x.:.......x..x...x...............:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 112856927 77357628 +3079 chr4 + 190214555 128678688 128678687 128678760 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGTATTGCTTGAACCTGGGAGATGAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::........x.xx.x.x.x::........::.:..x.xx:..:..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 52645483 NA +3178 chr4 + 190214555 128679928 128679927 128679994 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAACCTGGGAGGTGAAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x:xx.x...x::........::.:..x.xx:.....:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 52646717 NA +3323 chr4 + 190214555 128680662 128680661 128680744 83 CATGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......:...........::........x:xx.x...x::........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 52647465 NA +3675 chr4 + 190214555 128705598 128705597 128705682 85 CGCGGTGGTGGGGGTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:......----::.x....:.:............:........x.xx.x...x::...........:..x.xx:..:...:. 10M4D71M 59/81 72.8% 81/94230402 0.0% 4/81 4.9% 52672401 NA +3231 chr4 + 190214555 128706826 128706825 128706908 83 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGACGTGAACCTGGGAGCTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:.........x.::........x.xx.x...xx..x......::.:....xx:.x:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 52673629 NA +3109 chr4 + 190214555 128726769 128726768 128726818 50 TTTTTTGTTTAGTTGGTTTTGGGGTTTTTTGGGTTTTTTTTTTTTTTTTT chr4 + 94230402 38383698 38383697 38383747 38383698 38383697 38383747 50 TTTCCTGGCTGTTTGGTTTGGTGGATTTTTGGGTTTTTTTTTTTTTTTTT ...::..x:.:x.......x.x..x......................... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 90343071 NA +3024 chr4 + 190214555 128726776 128726775 128726821 46 TTTAGTTGGTTTTGGGGTTTTTTGGGTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 91261152 91261151 91261197 91261152 91261151 91261197 46 TTTGGGTGGTTTCTGATTTCTTTGGGTTTTTTTTTTTTTTTTTTAA ...:.x......:x.:x..:........................:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 37465624 NA +3304 chr4 + 190214555 128731233 128731232 128731313 81 AAAGGAAAAGAAAAGAAGAAAG---AAAGAGAGAAAGGGAGAAAGAAAGGGAGAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGG chr4 + 94230402 22672099 22672098 22672182 22672099 22672098 22672182 84 AAGAGAAAATGCAAGTAGAGAACCCAAAGAGAGAAAGGGAGACAGAGAGGAAGAAGAAAACTGCGTGAAATATAGAAAGATAAG ..::.....x:x...x...:.:---.................x...:...:....::.:.xx.x.x..:.x.x.......x.:. 22M3I59M 58/81 71.6% 84/94230402 0.0% 3/81 3.7% 106059134 84155421 +3032 chr4 + 190214555 128731235 128731234 128731292 58 AGGAAAAGAAAAGAAGAAAGAAAGAGAGAAAGGGAGAAAGAAAGGGAGAAAGAGAGAG chr4 + 94230402 78234323 78234322 78234380 78234323 78234322 78234380 58 AGGAACAGAAATGAGGAAAGAGAGAGTGTCAGGGAGAAATGAAAATTGAAAGAGGGAG .....x.....x..:......:....x.xx.........x:..::xx.......:... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 50496912 NA +3206 chr4 + 190214555 128731269 128731268 128731379 111 AGAAAGAAAGGGAGAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGG----GA---GGAAGGGAAGAAGGAAGG-GAGGGAGGGAGGGAGGGAGGGAGGGAGG-------GAGGGAGGGAGGGAGGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAA--GAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........--.:..xx.x...............:.....x...:.----..---.:..x....x.x...:..-...:..:::.::::.::.:.......x:-------..:.x.x.:...:..... 8M2D35M4I2M3I18M1I28M7I18M 79/109 72.5% 124/94230402 0.0% 17/109 15.6% 77582890 NA +3142 chr4 + 190214555 128741069 128741068 128741150 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGGTGAAGTGGGAGGATTACTTGATCCCAGAAAATTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........::::...x...:x:xx.x.:.x:......x.......:x..x:.....:.. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 52707868 NA +3222 chr4 + 190214555 128745819 128745818 128745879 61 AAGAGTCAATACAATACAGTGGACAGTACAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 77908260 77908259 77908320 77908260 77908259 77908320 61 AAGAGCTAATGCAAAGCTGTACACAGTCAAGTTTTTTGTTTTTTTTGTTTTTTGTTTTTTT .....::...:...x:.x..:x.....xx..:.....x........x......x....... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 50837559 NA +3194 chr4 + 190214555 128746875 128746874 128746953 79 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGCCGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--......:...........::........x.xx.x...xx:.x.......:.:...:xx:.x:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 52713674 NA +3333 chr4 + 190214555 128752656 128752655 128752731 76 CATGGTGGCACACACCTGTAACCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAACCCAGG chr4 + 94230402 76033197 76033196 76033270 76033197 76033196 76033270 74 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG ..::....::...:--....:::.........:..:........x.xx.x...x::...........:.:.::x.. 14M2D60M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% 52719459 NA +3005 chr4 + 190214555 128752977 128752976 128753031 55 GTGCACCTGTAGTCCCAGCTACTCACGAGGCTGAGGCAGAAGAATCACTTGAATC chr4 + 94230402 76033204 76033203 76033258 76033204 76033203 76033258 55 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACC ......x......:.........::x:........x.xx:x...x........:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 52719773 NA +3182 chr4 + 190214555 128761571 128761570 128761613 43 TATATATATATCTATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........:.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 101755575 88458980 +3099 chr4 + 190214555 128763626 128763625 128763692 67 AATAAATGCCTTTTTATGACACTGATTTCTTTTCTTTTCTTTTTTTTTCTTTTTTTTGAGATGGAAT chr4 + 94230402 48471957 48471956 48472023 48471957 48471956 48472023 67 AATGGTTACCTTTTAACCACACTGGTATTTCTTTCTTTCTTTTTTCTTTTTCTTTTTGCCATGTAGT ...::x.:......x.:x......:.x.:.:..::..........:..:..:......xx...x.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 80291669 NA +3442 chr4 + 190214555 128765183 128765182 128765266 84 ACATGGTGGCACGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....:--....x....:.:...........::........x:xx.x...x.:........::.:..x:xx:..:..:.. 10M2D72M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 52731987 NA +3198 chr4 + 190214555 128770362 128770361 128770434 73 TGCACCTCTAGTTCCAGCAACTTGAGAGGCTGAGGTGGGAGGATCACTTAATCCTGGGAAGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.x..........x......:........x:xx.x.:.x.....:.x..::.:.:x.:x:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 52737157 NA +3702 chr4 + 190214555 128779916 128779915 128779987 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGGGGAGGGTGGATTACTTAAGCCCAGGAGTTCTAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::......:.xxxx...:.x:....:.:.....:..:.:.:..:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 52746710 NA +3075 chr4 + 190214555 128783166 128783165 128783211 46 GTGAAAGAGCGAGACAACGTCTCAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382708 88382707 88382753 88382708 88382707 88382753 46 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAA .::..:....:.....:.x.........::.:.............. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 40400458 NA +3032 chr4 + 190214555 128784887 128784886 128784933 47 AGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA chr4 + 94230402 33767111 33767110 33767157 33767111 33767110 33767157 47 AGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAA ....:..::.:.............x..........xx......x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 95017776 NA +3368 chr4 + 190214555 128787154 128787153 128787223 70 CAGTGGCTCACACTTGTAATCCCAGCATTTTGGGAGGCTGAGGCCTGTGGATCACTTGAGGCCAGGAGTT chr4 + 94230402 76033199 76033198 76033266 76033199 76033198 76033266 68 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......:x...:--....:.:.....xx:...::........x......:.x.......:x....:..:. 12M2D56M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 52753955 NA +3296 chr4 + 190214555 128788671 128788670 128788728 58 GTGCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGTTTGAACACAG chr4 + 94230402 76033204 76033203 76033261 76033204 76033203 76033261 58 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ......x....:.:.........:..:........x.xx.x...x.::......x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 52755467 NA +3029 chr4 + 190214555 128789239 128789238 128789311 73 TGCGCCTGTAGTCCCAGCTACTCAGGAAGCTGAGGTAGAAGAATCGCTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::.:......x:xx:x...x.:......:....:..x:xx:..:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 52756034 NA +3211 chr4 + 190214555 128791724 128791723 128791795 72 GCGCCTATAGTCCCAGCTACTTGGGAGGCTGAGATAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x.:....:...........::........x:xx.x...x.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 52758518 NA +3593 chr4 + 190214555 128794897 128794896 128794979 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGAATCACTTCAGCCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:.........:.::........x:xx.x...x.....x.:...:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 52761700 NA +13280 chr4 + 190214555 128811544 128811543 128812175 632 GTGTGGAAATGGGGGCGGGCGGCGGCCGAGGCG-CTGCTTCTCCGCT--GCGGCCGG-------------------AGCGTCACCTAACGGTCCCAGCTGCGCCGCCCGGGCCGGGGTGGGGGGTTGCGGGGGCGGGGACGCCCGGCCCGCCGCGCCCGCCCCGCACAAAGCCCGCGGCGCGGGGGTGGCCGCTGCGCCCCCGCCCCGGGAACGGCCCGAAGCCCGACGCGGTCCCCGCGCCGGTTCCGG-CGGGCGG--CCGCAGGCGTTTGTTTGTTGGTTCCGCGCCGCCTTCCTCGCCGGATGGCTTCCTGTGACA-GAGGTGATACACAGTTTCCAGAACTGTCTGGGGGCGGGAGCGGGAGCGGGAGCCGAGCCCGCTCGGAGCTCCTCGCCGCCGCTGCCGCTCCCATCTTAAAACCGTTTCTCGCCGGCGCGCCCGCCCCAGCCCGAAGGTGCCGCCCCGGAGGGACTCGGGGAGGGGGACGGCGCGGCCGT--TTCCAGCGGCGC---------AAGTGGCTTC-TGGACGCGAGGGAGC--GTTTGATTTGCAACTGGGGCCGAGCGGATTGGTGCAGCTGGCGGCGGCGGGGCGGGAGGAGCTGCCGCGGCGGGGGGTGGCCA--------CTTTCAAATGGAGAGGGCGGCGGCGGCGGGGACGCCGC chr4 + 94230402 35696016 35696015 35696618 35696016 35696015 35696618 603 gcgcggcggcggcagcccacggctgccggggcggctcctcccccgccccgcggccggccgggcgcggcggggccTCGGAGCCGCGTAACGGTCC-----GCGCTCCGCGGGGCCGGCCGCGGCGTTCGCGAAGCGAGA-----CAAAgcgccgcgcc-gccgcccccggcgcccgc--cgccgggATGGGCTCTCCTCTCCCCGCCCGT---CCGTCGGCGCCGCGCCGCGGGGCTCTCCGCGATTCGGGGCGGGCGGAGCGGCGGGTGTTTGTTTGTG-----CGCAGCGCCT-----GCTGGCTG-CCGCCTGTGACAAGAGGTGATGCACAGTTTCCAGAACTGTCTGGGAGTGGGAGGAGAGACAGACACCGA-CACGAGCGCGAGTCCCCGCCGCT-------------------------------------CGCTCGCCCCGGCCCCCCCGTGTCCTCgcg-------ccgagggcgggggcggcgccgccgccgttccgacggtgacggcgctcggagcggcgtagcggcggcggggcagcaagtttaatttgcggccggggccgagcggattggtg--gcggccggcggcgggg-aggagcggcggcaggggaaggaggcgggcgcgccgggccgttcaaatggaga--gcggcggcggcggcggcgCGGC .:.:..x:::..x:..xx:....x....:....-..x..:.:....:--........-------------------:.x.:.:.x.........-----....:x.x....x.x..x:.x..x...xxx.::...:.:-----.::xx.........-...x.x.x.::x......--...x...:...x.x..x.x.:...xx....x---.x.:.x.x:x.x..x.....xx.:.x.xx..:...x..-.......--.x..:..:..........x-----...:x.....-----..:..x..-.:x.........-........:.......................:.:.....x:.:::.:.:x:....-.x..xx..x::x...:......:-------------------------------------...:......:....xxxx...:.x:.x..-------:..:..:x....:......x....:--....::...:.x---------:..:...x.x-:..xx...:..x...--....:......::.:...................--..x.x...........-:....x:..x..x.x..x:..:..:..x.:--------.x............--.............x.:...x.. 33M1I13M2I8M19I18M5D39M5D14M1D18M2D31M3D38M1I7M2I19M5D10M5D8M1D12M1I56M1D23M37D30M7D25M2I12M9I10M1I15M2I34M2D16M1D30M8I14M2D22M 398/555 71.7% 603/94230402 0.0% 125/555 22.5% 93115528 NA +19021 chr4 + 190214555 128831536 128831535 128831916 381 CCCTCC---TTTTTTAACCTGGTTTGTTAATGATTGCACCTAATTATGTATCTTTGGTCTTTTTACTGTTTACAATTCAAATGCTACTTAAAGCCATTTGTTTGCTTTTGTTTGCTGTAAATCCTGGGCTGCCATCTGAAGCACAACTTGATGATTGTGTATTATCATCTTGGGTTAAGTGCTGTCTCATTGCTTTGCAGGCTGCCTGCTGTTTCCCGGGGAGATCATGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACGACAATGGCAGTAAGTCCTGCTTTGTTGTTCTTGGAGCCTACCAGGGTTTGGGTCGGGGTAAAAACATGATTTTTTAATGTAATGCTTTAAATTGCTGAGGCCCTTTGCATGTCAG chr4 + 94230402 35703468 35703467 35703838 35703468 35703467 35703838 371 CCCTCCAGTTTTTTCCACCTGCTCAGAGGGTAATT--ACCTAATTAAGCACCTTTGAGATATTCGTTGCTCATATTTCAGATGCTGTTTAAAGTTGTTTGTTTTCCTTTACGCGTTGCAAATCCTCAGATGCCATCAGAAACACAACCTGATGACTGCGTATTATAATCTCGAGTTAAGTGCTGTCTGGTTGCTTTGCAGGCTGCCTGCTGTTTCCCGGGGAGATCATGAAACGACGTCGGCTTCCTAGCAGCAGTGAGAATTCTGACGACAATGGCAGTAAGTGCTCCTTTGTTG----TAGAGTGCAGTAGGTTATGAGTT----TGAAAATGCA---TTTTAATGCAGCTTTTCATGTGGCGGAGGCACTTTGCATGTTGG ......---.....:x.....x.:x.xx::.:...--.........x.:.:.....:xx.x..:::..:.:.:.x....:.....::......:::.......x.:...::x:.:..:.......x:.x.......x...:......:......:..:.......x....:.:..............x:..............................................x....x.....:............:........................x..x........----.:...:x:.x:...x.x..:..:----.:....::::---........:.::x:..:.x:.x..x.....x..........::. 6M3I26M2D259M4D23M4D10M3D44M 283/368 76.9% 371/94230402 0.0% 16/368 4.3% 93128068 NA +16347 chr4 + 190214555 128846236 128846235 128846538 303 TTCTGTAATAGGTCAGGCTTGTTCTATGTTGATACAGTGACCTTGTTACATGGCA-GCTCCATGGTTACATTGCAGCTGCCAGCACTCTGAATAA--GAATGCAAATATCAAATGTCAGTGTCCCTTTCT--------------CTTCCTTTCCAGGTGTTTAGGACAGACCTGATCACTGCCATGAAGTTGCATGACTCCTACCAGCTGAATCCGGATGAGTACTATGTGTTGGCAGATCCCTGGAGACAGGAATGGGAGAAAGGGGTCCAGGTGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGGCCAGGTAGAG chr4 + 94230402 35716682 35716681 35716991 35716682 35716681 35716991 310 TCCTGCAGTGGGATGGGTTAGTTGACTGTTGATACAGTGACCTTGTTATGCGCTGTGCTCCACGGTTACCCTGGAG----------TGTGAATCATAGAGTGTGAATATCAAATGTCAGTGTCTCTATTTTTCTCTCTTGGTCACTCTCTTTGCAGGTGTTCAGAACGGACCTGATCACTGCCATGAAGTTACATGACTCCTTCCAGCTGAACCCTGATGAATACTATGTGCTGGCAGACCCCTGGAGGCAGGAGTGGGAAAAGGGAGTGCAGGTGCCAGTTAGCCCAGGGACCATCCCAGAACCAGTAGCCAGGTATAG .:...:.:.:..x::..:.x...xxx......................:::.x::-......:......x:..x..----------.x.....x.--..:..::...................:..x.:.--------------..::....x........:..:..:.......................:..........x.........:..x.....:.........:.......:........:.....:.....:..:..:..x........x..x.....:...........xx.:..x..:........x.. 55M1I20M10D9M2I33M14I176M 235/293 80.2% 310/94230402 0.0% 27/293 9.2% 93129554 NA +11649 chr4 + 190214555 128848960 128848959 128849172 213 CTTGTTTTTTTATTATCCAGGGTTGTGTCTGAAGAGAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGAGCCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGTGAG chr4 + 94230402 35720422 35720421 35720632 35720422 35720421 35720632 211 CTTGTCTCTTTGTTTT--AGGATTGTGTCTGAGACAAAAGCTGTCACATTTACACGTCCCCGGAAGTATATTTCTTCATCAGGCACGAAGCCTCCAGAGCTGGGTTACGTTGACATTCGAACCTTAGCTGACAGCGTGTGCCGCTACGACCTCAGTGACGTGGATGTAGCATGGCTGCAACTTGCCAATGAAGAATTCAAAGAAATGGGTGAG .....:.:...:..x.--...:..........::x:...x.:x...::..:.:xx.x...x:......:..:x:x.........x.x:.......x...:....:..:..x.....:..:..x:.:..............:.....:.......:....:......:x.........x....x:.............:..:..:......... 16M2D195M 160/211 75.8% 211/94230402 0.0% 2/211 0.9% 93128538 NA +16314 chr4 + 190214555 128852054 128852053 128852297 244 CAGGAATGCCTGAACTAGATGAATACACCATGGAGAGGGTCCTAGAGGAATTTGAGCAGCGATGCTACGACAATATGAATCATGCCATAGAGACTGAGGAAGGCCTGGGGATCGAATATGATGAAGATGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTGTGACAAATGCAACATCTGTGTGCACCAGGTATGTGGGGCAGGGAGGCCAGAAAGAAG chr4 + 94230402 35723486 35723485 35723728 35723486 35723485 35723728 243 CAGGGATGCCCGAGCTGGATGAATACACAATGGAAAGGGTCATAGAAGAGTTTGAACAACGATGCTATGATAACATGAATCATGCTATTGAGACAGAAGAAGGACTTGGGATTGAATATGATGAAGATGTTGTCTGTGATGTCTGTCAGTCTCCAGACGGAGAAGATGGCAACGAAATGGTGTTTTGTGACAAATGCAATATTTGTGTGCACCAGGTATG-GCAGCTGGGGAACTGTAGGGAAG ....:.....:..:..:...........x.....:......x....:..:.....:..:........:..:..:...........:..x.....x..:.....x..x.....:................................:........x..:..x..:..:.....:..:........:..............:..:.................-.x:..x...:::.::x.::.... 220M1D23M 200/243 82.3% 243/94230402 0.0% 1/243 0.4% 93128568 NA +12906 chr4 + 190214555 128855592 128855591 128855811 220 TTCTCTCTATTCCTCTGGGATGTGCCGTGGCATCACAGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCAGCTGGCTGTGCCGGACATGTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTCCGAAGAAGGGTGGAGCTATGAAGCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCTGTGGATCCCTGAGGTACGTGTGGTTCT chr4 + 94230402 35724792 35724791 35725002 35724792 35724791 35725002 211 TTCTTTCTCTTTCTTGTGACTGAGT---------ACAGGCCTGTTACGGTATCCTGAAGGTGCCAGAAGGCAGCTGGCTGTGCAGGACCTGTGCTCTTGGTGTTCAGCCCAAGTGTTTGCTGTGTCCCAAGAAGGGTGGTGCCATGAAGCCGACCCGCAGCGGCACCAAATGGGTTCACGTCAGCTGTGCTCTATGGATTCCAGAGGTAGGTGCTGATCT ....:...x..:..:xx.:x..x.:---------............:..x.....x.....:.....:...............x....x.....:..x..x........x..:...:..........x...........x..:........x.....:.....x.....:.....:.....:...........:.....:..x......x...:x.x... 25M9D186M 172/211 81.5% 211/94230402 0.0% 9/211 4.3% 93130800 NA +9281 chr4 + 190214555 128857320 128857319 128857460 141 CTGTTTTCCGACCTTT-------AGGTGAGCATTGGCAGCCCAGAGAAGATGGAGCCCATCACCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGCCTCTATACAGGTAATT chr4 + 94230402 35725557 35725556 35725704 35725557 35725556 35725704 148 CTGTTTTTTAATCTTTTTCTCTTAGGTGAGCATTGGAAGCCCAGAGAAGATGGAGCCCATTACCAAGGTTTCTCATATTCCCAGCAGTAGATGGGCATTGATATGCAGCCTTTGTAATGAAAAAGTTGGTGCTTCTATACAGGTAATT .......:::.:....-------.............x.......................:........x..x..:...........:x.:.....::.::.:........:..:.....:..:x....x..:............... 16M7I125M 117/141 83.0% 148/94230402 0.0% 7/141 5.0% 93131763 NA +3075 chr4 + 190214555 128859507 128859506 128859575 69 ATGCGTGTGAGTATGCTTGTGTATGTGTGTATGCATGCGTGTATATGTGTATGTGTGTGAGTATGCGTG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...x.:...x..::.:xx..:.....x.....:.........:...:.::..x...:..x:.x..::.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 42225584 NA +10237 chr4 + 190214555 128859882 128859881 128860786 905 TTGATTTTATTAAAAGAATTCCTCTCTGAAATGTCTGCAGCTGTGAAGGCTCTGGTTTACGTTTCTGTAACATCTGTTTGCTGAGTCAACCTGAATGGGAAAACCCAGAGGAAGGCCATTTGGCGTTTTTACAAAGTCCTGTATAAATATTCTGCTGCAGTTCATTTCTCTTTAGGGTTAGAGCGCTTGGGTTAAGTGTAGTTTAAGCCAAACACAGATAGTGTCTCAGT--CATCTGTTCCCACTTT---TACTTCCCACTTGGCTGTGTGCTACAAGGGAAGACACTTTGTCTTCTCATGACAGTGGCCAGGTGTGTATGTGTGCGTG------------CTTGTGTGTGTGTTCTGCCACCAAAGCTGATTTCATACATTTCTTAGAATTGAGGTTATTTATAGAGAAAATACAGATTTA---------------TGTCAGTCTCTGTGGTTG--AAGTGTTTGTAAGGGTGG------AATGGTGAAGGGAG---CTGGATTTTCTCCTCTTCTCAGTAAAAGAGACCTCATAGTAATGGAAGAAAGCCTGGTTGGCAGTGAGTTTCCTCTTAAATACTGGAA-----TGATTAGGGGGAAAG---------CCTCAGCTCTAGCCTCTGCCATCCTTGGTGATGT-GATTCAGGATCTGTTGAATGAGTTGAATTCAACTTCTC-AGTTGGCTTGAAGCC-----GCTGGATTCTACAGCTCTGTGCAGCCCCTGGCATGCCCC-GGTGATCACTTGGCTTCACACAATGCAGTGCTGCTTTTCAGGGACTGGCTTCAGTCACCATGAGGAACCACCTTCTAGGGATTTGCT----------CAGCAAGATC-AGTGGAGGAGGAGTTAATCACTTTGCTCCTGCTAGACCAGAGGCTTGTTGTCTGGATCAAAGGCACTAAATTGTGGCCCTGTTTAGGCAGTGAGAGGGGAAGTGTTCTTCTGCATAGGTTGCT chr4 + 94230402 35727650 35727649 35728536 35727650 35727649 35728536 887 TTTATCTTTATTAAAGAATGTTCATTGGAAGCTTTTGCAGTTTAACATACTTT---------TTATATGCCATCTGGCTGCTGAGTCAACCTGAGCAGGAAAACCCAGGGCAAGAT-ATTTGGCTTCTTTACAAAGTGCTGTATAAACATCCGAGCACAATGCATTTTTCTTTAAGGTTAGATGGCTTGAGTTAAGCACAGTT-------AACA-----------TCAGTAACATTCATTTCAACCTCAAATTCTTTTCACTTG-----------CAGGAGAGG----------------TGTGAGTTGGTACGTGTGTGCATGTGTGTGTGTAAATAAACCTTTCAATGTATG-GCTGGTAATAGCTATGACAGCAT---TTTGCAAGAA--AAGGTTACTTAAAACCAAAATGAAGTGCTAAATCATCTGAACAAGTGCCCATCACTCCGGTGAACAAGTGGTTCATTGGGAGGAAGAAAAATGATAAAAAAAGAATTCTCATTCTCTTCTACCCCATGTGAAATGAAGGCTGTAGTAATTGAAGCAG---TGATTGACAGTGA-TTTAATATTTGACATTATAAACTTTTGACAATGGGATAAAAAATAACCTATTCAGTTGAGGCCTTT-------TGGGTAGCATGGGTCCAAGTGCTG--GAAAGACTTTAATTAAAAGTATCAAACTGGCCTGGAGCCGGCAAGATGTATTTTCCCTCTCTCT-CA--CACTGACAGTCAAAGGGGGAACATTTTGCTTTGTGTAACACTG------TTCTCAGCCAGTGGCTTCAGTCAAGGTAAGAACACTTCTCTTGTGGATTTGCTGATTATCGAATAGAGGGATTGGGCTAGGGAGGGGTTAACCACTCCTGTCCCACTGGGCCTCTTGGTTGCTGCCTGGCCTGAAAGCCCTAAATCTCAAACCTAATTA---AAAGAGAGCAAAAAAGT--------ACAGGCTGCT ..x..:..xx.x.......x:::x.:x...::x.:.....:.xx:x.x:..:.---------..x.:.:x......x:................:::...........:.x...::-.......x.:..........x.........:..:.x:x::..:.x.....:......:.......xx.....:......:::....-------....-----------.....--...:::..:.x..:.:---.x...::......-----------..:.:..:.----------------..xx...x.x:.x......:::....:...------------:..xx:...:..-x...x:.x:.:xxx...:xx...---...x:x....--:......:...x.:xx.....:x..xx:..---------------..:.x:..x..x:...x:--.....x..xxxx...x..------....:.:..:::..---::xx...:...:..x::.:xx..:...x::.xx:::.......x....x.:---..:...:......-...xx.x..x:.:.:.:x..-----...:x.x...:x..:---------x:....:.xx:....:.-------.x...::::.-.:.:..:.xx...--...x..x..x....x..xx.x..-.::....:..:....-----.x..x...:.x.xx....x.-..--.x...:..xx.xxx-..x..x..:..x....:::::..::.x.------..:....xx.x............xx:.:..:.xx.x:..::.:x.........----------:..x::...:-:.:x::.....:.....:....::xx...::..:.:..xxxx.x...:..:....x:::..:..x......:x:::x...:x...---.:x.....x::..:x..--------.:...:.... 53M9D54M1D86M7D4M11D5M2I16M3I13M11D9M16D30M12I12M1D23M3D10M2D30M15I18M2I18M6I14M3I51M3D13M1D20M5I15M9I17M7D10M1I13M2D23M1I15M5I20M1D2M2D14M1I28M6D53M10I10M1I85M3D17M8D10M 519/811 64.0% 887/94230402 0.0% 170/811 21.0% 93132232 NA +27533 chr4 + 190214555 128861625 128861624 128862229 605 GGGTGCCTAGCACTGCAGGCCTTCTGCCATCATTGCTCTATAAT-GGTCTATTCTCATGTTCTTTGTGTGTTCTTGACAGTGCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTTTGACCGGGGCCTGGAGATGAAGACCATCTTAGCAGAGAATGATGAAGTCAAGTTCAAGTCCTATTGCCCAAAGCACAGCTCACATAGGAAACCCGAGGA-GAGTCTT---------------GGCAAGGGGGCTGCACAGGAGAATGGGGCCCCTGAGTGTTCCCCCCGGAATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGCCCACCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTGCCAGGGCTCTGCGGCTGCCTGAGGAAGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCTGCGGCAGGACCTGGAGAGGGTAA chr4 + 94230402 35728583 35728582 35729186 35728583 35728582 35729186 604 GGCTGCTTAGT--TTTAGGCATTGTGGTTTCTTAAATTTATACTTGATGAATTTTAATCTACTTTCTG---------CAGTGTTCAGTGAAGAACTGCAGAACAGCCTTTCACGTCACTTGCGCGTTTGACCGTGGCTTGGAGATGAAGACCATACTGGCAGAGAACGATGAGGTGAAATTTAAGTCATACTGTCCCAAGCACAGCTCCACCAAGAGAGCAGATGATGAGACCTTCAGTGACCACCTGTGTCAAGAGA-------ATGGGAATGGGATTCAGGACAGCTCTCTTCCTGCCCACATTGACCCTTTCCACAGCATGGATCAAAACCAGGAGGAAGCCCACAGAGTCAGTCTTCGCAAGCAGAAGCTCCAGCAGCTGGAGGATGAATTCTATACCTTTGTCGAGTCTCTGGAAGTGGCTAAAGCACTGCAGCTGCCTGAGGAGCTGGTGGGATTCCTTTATCAGTACTGGAAGCTGAAAAGAAAAGCCAACTTCAATAAGCCATTGATTACCCCAAAGAAGGATGAGGAGGATAATCTGGCCAAACGAGAGCAGGATGTTCTATTCAGGAGACTGCAGCTCTTCACACATCTCCGGCAAGATCTGGAGCGGGTAA ..x...:...:--.x:....x..x..x:x..x.x:x.:....x.-.:.xx...:.x..x.x....x..---------.....:..x............x.x........:..:..x..:..:..x........x...:................x:.:........:.....:..x..:..:.....x..:..:..x...........xxx:.:..:.x.x..x..-...x.:.---------------.x....:.:-------.x.:.......:::.xx..xx.:..:.::.xx:x:.xxx.x..x..:..:xx....x.x..x..:....:......:......x.:..x...x.:..:...........x......:..........:.....:.....:...:.x::x.....x..x..:.::..x....:............:x.:....:x.....x..:............:....:..:..:.:.........:.....x:....:...........:.....:.....:.....:.....:..:...........::....:.....:........x.....:..:..x.....:..:......x...... 11M2D31M1I23M9D149M1I7M15I9M7D357M 436/587 74.3% 604/94230402 0.0% 35/587 6.0% 93133042 NA +8683 chr4 + 190214555 128867846 128867845 128867979 134 TACATTCTAGGTTCGGAACCTCACTTACATGGTGACCCGCAGGGAAAAGATTAAACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAATCTTTACACTAAGCTTTTGGAGCAAGAAAGAGTTTCAGGTATGC chr4 + 94230402 35736138 35736137 35736271 35736138 35736137 35736271 134 TGCCTTCTAGGTGCGTAATCTCACTTACATGGTGACTCGAAGGGAAAAAATCAAGAGATCTGTTTGCAAAGTTCAAGAACAGATATTTAACATCTACGCAAAACAGTTGGAACAAGAAAGAGTTTCAGGTATGC .:.x........x..x..:.................:..x........:..:..:x.:.....x........:..:...........:..:x.:...:.x..:.xx.....:...................... 134M 109/134 81.3% 134/94230402 0.0% 0/134 0.0% 93131708 NA +42850 chr4 + 190214555 128871316 128871315 128872286 971 TGCTGTAATTTTTCTTTATTTGTGGTTTTATGTTTATAGGTGTGCCTTCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTTTTGTTTAACAGTCCTTCTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCCCCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGAAGGGAGGGGATGGTG--GTCCCAGAGAGCTTTTTGGGTTTAGAAAAGACCTTTGCAGAAGCACGTCTCATATCAGCACAACAGAAAAATGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGACAATCGTTTTCATTGTGATCTCATTAAAGGAGACTTAAAGGACAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAACACAAGAGCTGCCACCTCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAAAGTAAACTATAATCAGACTGCAGTCAAAGTGCCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGATGGGGCCTGCCACCAGCACTCAGACTACCCATATTTGGGCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAAGCAAATTAAAATCCGACAATGAGAATGACGGGTATGTCCCCGATGTGGAAATGAGTGACTCAGAGAGTGAGGCATCAGAAAAGAAATGTATACA-------------CACCAGCAGCACTATCAGCAGAAGGACAGACATTATCAGGAGAAGCATCTTGGCTTCTTGATGCAACAGAGATGATGCGGAAGCC chr4 + 94230402 35737091 35737090 35738049 35737091 35737090 35738049 959 TGCTTGACTTTAACCTAATTTGT--TTTTACCTTTA--GGTGTGCCTTCTTCAT------TCTCCACAATGGAAAACGCAGTGTTGTTCAATAGTCCATCTTTGGGTCCCAATGCCCCTAAGATAGAGGATTTGAAATGGCATTCAGCATTTTTCAGGAAACAAATGGGCACATCTTTGACACACTTTTTGAAAAAATCACACAAAAGAGACGGAGTAAGTAATAGCTTTGGGAACAGTAGCAAGTCCATGCTGAGGCAGCCCAGCC-----------AAAGGGGAGATGGTGCAACTCCAGGAAGCTTGTTAAATTTTGACAAGAGCTTTGCAGAAACACGGATTGTATCAGCACAGCAGAAAAATGGCATAGTTATGCCAGACCACAGAAAAAGAAGAGACAATCTTCCACAGTGCGAGGTAATCAAGACAGAACTGAAGGAAAAAACT---AAACATAACCACAAACCACTGAGACCCACGGAACTCTCTCAGAGGCAATCAGAAAACAAAAGGGCTGTGAACCACTCC--AGTGGCA-GGTCAGCGCCTGGCACACGGAGGGATATAGTGCCTAAATGCAATGGGGGTCTTGTCAAAATAAACTCCAATCAGACAGTAATTAAAGTGCCTACGACACCCACGAGCCCAGTGAAAAACTGGGGCGGATTCCGAATTCCAAAGAAGGGGGAGAGGCAACAGCAAGGCGAGAGCCCAGAGGAGACCTGCCGCCAGAACTCCGGTTACCCCTACCTGGGCGTGGGCAGAGTTTCACCACAGGATAGGGCAAAAAGCAAGCCGAAGCCTGACAGCGAGAATGATGGGTACTTCCCTGATGCTGAAGTGAGCGACTCAGAAAGCGAAGTAGCTGAAAAAAAGTGCAGACAGCACAGGATCAGCCACAAACAGCACTATCTGCTGAAGGACCGACATCGGTAGGAGAAAAGTCCATGCATCTTGACCGGGCAAATAGGACAAAGTGGCC ....xx.x...xx.:.x......--.....:x....--..............x.------:....x..x........:::x.x.....:..:.....x...x.x..:..::....:..:...........:.....:........x.....:.....:...........:..x..:...::x..:.:x:.......::.x..:..:x....:xxxx.:x:x......::...:.::::x:....:x..x......:......x::..-----------.::.:..:.......--:::....::.....x..:::...x..x....x..........:....xx.::..........:...........::.:..x...........::.:................x.::x..x..:..xx.x..:..::x...x:.:.....x...x..---.....x.::.....:..x..x..::....:..xx.x..:........x:::..x....x...:....:x.x.:x.:.:--.....x:-:......:.........x...:...x........:..:........xxx:..x:.....:......x:........x.:.:.:...........:.....::.x....................x........:.................:x....:.....:..x...:x..xx..x.:.:......:....x....x.::.....x..::.....x.:...x.....:..x.xx....x..............::::..::.:....::........:.....:x....:....:x...:....:........:..:..:.:.x.x.....:..:..:.x...-------------...x.:..........x..x.......x.....::x:.......:x:..:xx..x......:xx::..:.x.x..::x:.x:... 23M2D11M2D16M6D207M11D15M2I156M3D78M2D7M1D346M13I85M 683/944 72.4% 959/94230402 0.0% 42/944 4.4% 93134225 NA +37263 chr4 + 190214555 128872223 128872222 128875243 3021 AAGGACAGACATTATCAGGAGAAGCATCTTGGCTTCTTGAT---GCAACAGAG----ATGAT--GCGG-----------AAGCC--CTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCT--GATGTGG-------GGGAGAAGCAGA-AACCCATTAATCCTGAGCTACACAAACACATTTACTTGCAATTCAGATTAATTTTTTT-----CCAGAGTCATTTTTAAATCATTTTTGTGAGAAGTTTG------TGTTATTTGCAACTTGT-TGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAACACTAAAATAAA-AATGAAATGTTTTAAAGAA--------GGCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCCC-TCTGCATT----------------CTTCCC------------AAAGCACAAACTCATGGTT--ACCTGAATATAGGGAACCAGATATGGTTCTTGAGAAACCCTCATGGTACCATTCACAGCC-----CATAAAGTTTATTTTCTAGGACTGTGGTAGATCTTGAAATCATATTTATATTTGGCCCTCAAGGCTATTT-TTGTTGCATTATA---GCATATAGGCAGCAGCTCTGAAGCTTCAGTAACACTAAGAAATTTATGTGTAAATATAGCAGTCAGGGAAGAGAATTTTAAAAAAGGTCATTATTGAAGAAGCTGAGGGGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGAAG--CCTGTGAGTGGGTTGTGGATATGGGACT--GGTGGAGAGTGAGACTGTTAGGAAAGTTGTATCTATGAATAAGGGCAGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCA-GACTCTGGTGACTGTTACTTCCCAGAGCCAACCACTAGTGCAT----------ATGTTAGGGAATCTGGGCTTCCAACATGAATGGATTCCTTAAGAAAAAGGAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAAGAAAAAAGAAAAAAAGAGAAAAAAGCGAAATAGGTTATATTTTAAAA-ACAATAGAAAGGCAATAAGTTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGTACCCTTGAATAGGTTTTCTGTAGTCAGAGTTCTAAACTCTAATTTGTAACTTGGACTTTCTAATTGCAAATGGCAATAACTATTAAGTTATCAGCAATAATAAATTTAGCATTAAATTTGAGTACAATGTTTTGTTTTTGCACTCCCCATAGTGCGTATGTATTAAGACAGTGGATAGTGTTTAGGTCCTGTTAATTTTCTTTGGAATTCAATGTGGTTGTGAATCAA------ACTTAAGGAAGGAACGTTTAAATAGCAATGAGATACAGAATTATGGGCCTTTGGAACAAGCCCGACTTCCCCTAA--ATTCTCCTTAGTTTGTTAATACCAGTATTCAGATTCCTGATTCATTTATACATCTGTTTCCATATGGCAGGGACATTATGATACTTAATGAATAATGCTTTGAGGAGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGATTGTCAACAACAAAAAAGGCTTATTGA-ATCCCATCTTGCTATGCAAGTTTTATCAGATGATCAAATAGTAGATCTGA-TACATCCCCATTGTATGTACGACATTTTCAAACC---AAGTCTTAACTTTTCAAGGACATTTTAGTAGCTAATTCAGGGGAGGGGGAAGAATGATGCAGGTTTTTAGATTGACTGACTATTTTTGAGTTATGGGGCTCATTTTGAAAGACTGCTG-------------TCCAGATCAGCTTGTTGCT----GCAGATAATAG------AAGGTTCTTATGAATCCAA-GTTGTATATTCACTTGTAGGATAATTTAAAAATTAGATTTTTTTTGCATATGAGCAAAAACCTTTTGCTGGATACAGGAGAAGGTTGGACTTTATCTACAGTTATCTTTTGATTACA-GCAACAGC-------------------TCTGGGTGAGAGTAGAATTTATAGAGGGATAATTTGTCAAGCCATAGAAAGAA-AATCTAAATT---AATCTAGTAAGTGTATGACCTCTCACCATTTT--AAGAGGTATCAGATTCATTTGCACTATTAGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACCTGTTTT--TTCCCCACATTTAGGTTGAAAAGCTTTCAAATGTTCCAAGTTATGCTGAACCAAAAAAAACAAAACAAAAACAAAACAAAAAATATTAAAAAAAACCCACACAAAAACAAAACACACAAAAATAAAAAGCCCACACTTTTTATTCCTGCTTCGAAATGCAAATGGATAGAGCACGGTTTCTCTGACAGTATAATGATAGCTTTGTGAGTTAGTTTCATGTCATGCTGGGAACTCTCTATGAGGTGGCCATAAG-CAGCAAC--CAGCCCAAACACCCACTTGCGTTCTATTAGTATGGAACCATTTGCATTTGTTTTTTTTAAGCTTTATCTTTCCTTGTGCATCCTGACCAAGAAATATCTTTGATTATGATTAATGTATTATGTCAAAATGTAGGCTAGTTAAACTTTTGTAAAGTTGCCTGGAATGTCATTTGTTAGGTTATAAACACA---AGATCTAAATGAAGGGTTTTATGTGTTGTGTACAAATCTTATT--------TTGAAATGGACAAACTTGTCATTACATTTGTAA--CCTTGTACAGAGGATTTTTCACTATGTGCCTAGCTT-GGTGTCCATTCAGCTAAAATTGAAAAAAAAAAAAAGGTGCATGAAGAGTTAAAAATCAAATTAAAG--TATATGTAGAGATGACTATTTTATATTACATGACCCAATCCTGTATTTATTTCTACCCCCT------TTTTGAAAGTATTTATAAAA--CTAGTTGAGGACAGCTGTATTTTTTTGTTGAACTATTTAGTAGAATTGTGCCTTTTTGTCTGTATGTGAATAAATGCTGTACA-TTTTGCAATACATTTTAAGTGTCTTTTGAAA chr4 + 94230402 35738613 35738612 35741316 35738613 35738612 35741316 2704 AAGGACGGACATTATTAGGAGAAGCATCCTGGCATCCTGACCGGGCAATGGGGCACCGTGGTCAGTGGTCACTGCCTACAAACCAACTTCACTTTATTTATTGG-TGTGAGAGGGGAGAGTTGTTAGACGTGGCTACAGAACGACAAATAGATAACCCATTATTCCTGAGCTGTATAAACATGTTTACATACACTTAAAGCTGGATTTTTTTGCCCCCTGGCCCATTCC------------GTGACAAGTTTGAATCTCCTTTATTTGCAGCTTCCCTGAGTAAGCAGAGAATTGG--------CAT----CACTACTAAAAC-AGGATTTGTGATGAACACTAAAGTAAGTCACAAAATCATCTAGGGGGCTAGGGTGGGTAGTGGGGAATTAGGCAGCATCATCCCTTTTCGCTAATCTGCACTGTTAAAATTCTCTTCCCTTCCCCTGCTTTCTGGAAAAGCACAAGCTCTTAATTTAACTAGTGTGTATTGAATCAAAGATGGTTATTTATTTAACCATATTGCACTGCT-ACACCCTGCTACAAACGGTCACTTGCCTTGGATGGTGGTAGGTCTT-------TGTCCTCTCTTTGC-----AGAATGTTTGTTGTTGCATTTGATTTGAGCACAAGTGGCAGCTTAAAACCCTCCGTAA-GCTCCAGAGTTGATGTGTAA--------GTCCGAGACCGAGATGCTCAAC----------TGGAAAAAAAGGAAGGGACAGGGCAGGGTTGCAGCT-------------GCCTTACACTGCAA-------CAGCTTAAAAGTACTCAGACTGAGC-GTGGAGAAAAGCCTCCAGTGG----------------------CTTAGTTCTGAGAGAGGG--GCTGGG--------CTCGCAGGTCACCGTGCCC---------------------------------CGTGGAATGACCC--------GTCAGCATTTCGTTACCTGCCTCCCAA--ACACCTTGAC------AATTCAAGCAACAAAATGCTAAGGCACCAGTCAGTAGGATTTCCCAAAGCCCACCACATATGCACTAATGGTAACGTATTGGGAAAGCCCGGCTTATGACACTAAAGGGTTACCT--TAAAATGGACataaata-------------------------------------------------------------tatatttttaaataaaatGGAGAGGCAATAAATTGTGATTAGCTCTT---------TACAGTCAAATGAAGAAAAGTT---ATTCTATTCTGGACTAGATTTGATGGA---AGAGG---GAACTCGTATGCATACTTT---TTTAATAATTGCAAATGGCAATAACGAGAAAGCTATGAGCAATAATA---TTAACAGTTCATTATGATAC-------TTTTTTTGTACCGAGTAGAGCGCACATGTA-----ACAGTGGAT--TGTTAGGAGCCTGGACGTTTT----GGAATTCTGCGTAGATTTAAGTTAGGTATGCACTGGTGAAACGAAGGTTTCAGCTGCAACGTGTTAGAGAAACACAGGCATAAAGAACAGCCCAGCCTGCTGTTAACCACGCTCACTGGCGT--------------------------TGCGTTGTTAGACCCTTGCCTCTCGAGCAGGGAAGATGT------TAAAGTACAGTA-------GAACTCTGCCGT-AACT---GAGTCTTCCAGAAGATT--CAATCA-GAAGAAGGCTTATTAACACCCCGTCTTGCTATGCAAGTTGTAACTTAC--TTAAATATTGCAACAGAATGTATCCCTGTCGTTC-----ACGTTTTAAAACTCTGAAGTCTCAGCCTTTT---GATATCTTCTGGGGTGATGC-TGAGAGAAGGAAG-------------TTTGGTTTAAC----------------ACGGTGTTC-TTTGAAAAGACCATTGCTGGACCCAAGAATTTGGATTGACCTCATGACTTGCACAGATGGAAGCCCAGCAGGGCACTGGCGAACGTGACGTTACGTAGTTGCTTTTGGGGTGTGTTAAAATAGAGGTACCG-----AGGCGATCAAAAA-------------GCAGCAGGCAGACGGACGGTAAATGCAGGTCGCTCTGCTTGACATACAACTGCACGTTTAAGGCAGGCGTTGTCTCGGTAAGCAGCTCACGTCCACATGGGGAATTCTTCAAGCCATAGATGGAGTAATCTAAATTCTGATTCTAGC----GTGTAACCTCACACCAGTTGGAAAGAGGTACCTTGTTAATTTGCACTATTACGATTGCTAGTGTTGTGCAGAATGAATGCCTTACCTGTTTTGCTCCCCGATGTTTAGGTTTATAAGCTTTCTAACGTTTCGAGTTACGCTGAACC-------------------CAAACCAAAAAA-------------------------------------------------GCGCTTCCCCCCCCCATTCCAAGA-GCAGCCGGATGG------------CTG-CGGGATG--GCCGGCTCGGTAGGGCAGCTG-----------------TCGGCAGGAGGTGGCGGAGGGACGGCAGTGACAGCACAG-CACCC---CGTACTGTGTCGGGATGGAACCGTTTGC------------TGAATGTTACCTTTACTTGTGCAGCCTGACCGAGAGAC--CTTTGATGCCGACTGACG------GCC----CGTGGGCTGGTTGGACTCGTGTCA-GTTGCCCGGCATGGCAGTCGTTAGGTTCCGAACTCACGCGGATCTCAATGAAGGGTT----GTGTGGCGTATCGGCCTGAGTGGCGGGCCTTGCAGCAGGCG-----GTCATTACGTTTGTAAAGCTGTGTACAGAAGGTTTTTCACTACGTGCCTGGCTTTGGTGTCCATTCGGCTGAATT-----GAATTGAGAAGGTGCATGAAGAGGAGCAGGTAGAAACAAAAACTATATGTAGAGATGACTATTTTATATCACATGGCCCAATCCTGTATTTATTTCCCCCCCCCCCTCCCTTTTTGAAGTATTTATAAAGACCTAGTCGAAGACAGCTGTATTTTTT-GTTAAAATATTCGGTAGAATTGTGCCTTTTTGTCCGTACGTGAATAAATGCTGTACATTTTTGCAGTACGCTCACAGCGGTGTTTTAGA ......:........:............:....x..:...:---....::.:.----:..:.--.:..-----------..:..--...::xx:.xx.:.....-.x..xx..:......:.x.--..:....-------:x..x..::...-.........x.........::.:.....::.....x.:..x..x.:::.::x......-----..x.:x:....::------------....x.......------:x.........:...x:-....x..:....::.x.:.--------...----....:....:..-..:.:::.x:x...........:...:-x.::....xx.:..::.::--------..:.:x.xxx..x..:..xx...x.x:::..x.x..:x-......:.----------------......------------.........:...x.::..--..:x.x:.:..xx...:..:.x......x..x.xxx.x..x:..x.:..:::.-...x..-----..x.x:..:xx..x:..x...:x.......:....-------.:.::x:x:..x..-----..:x.:...-..........xx.---.x::.:.:.::......:x:..x.:..x....-:..xx::.:..x........--------...x.:..xx:::..x:.x..x----------.x...:..:xx..:.........:..:.:...x..x-------------.xx.x.:.:x....-------.x....:..:--x..xx..x..:.:-.....x.x::.x..--:....----------------------:x..x:.x...:x:....--.:..::--------:.::.x:...xx.x..x..---------------------------------.x...:..xx...--------.:..::.::.x.::.:...x..:....--::..xx..:.------.:.......:.x:..x.x.:.-.:.x.::..x.x.:xx.:......:....x.....xx:....:----------:.:..:..:..x.:x.....x::...:x..x..:..x.:.--x....x...x.x...x.-------------------------------------------------------------........x...-.x...:..:.........:...:...x.......---------:.x:..:.x.:::::..:..x:---.x.x..::..x..x...:...xx..x.---....x---:.....xx..x::..x:..---:..xx....................x.xx...:...x..........---...:..x.xx...xx::...-------.x......:..:xxx:.x..:..::.....-----.........--....x:.:x....xxx:....----.......x::..:.x.x.:.:.:.:------...x:x.:..x...x....x.::x....:.x.x..x....x:.::...x.xx:.....:x..x.x..x.:x:...--.:x...x:.:.:x.--------------------------.x.:..xx..x.:.:x.x:.:x.xx:.......x:x.:.------...x.x.:.:.:-------..::.....x..-....---:...........x....--...:x.-:..:..........:.-.:...:................x..x.xx.:--.:.....x.:x.x.x..-.::.....::.:..x:-----..:....x....:---......:.:.:...:---..:..:..xxx:.x.:..x.-x.:...::.....-------------...:.x..:..----------------.:..x.:..-...x:......:::..-------------.:::...:::.:.xx..x:----:.....::x..------.:..:x..x::...:x::.-...:::..x.::...x.:..:.:xx......xxx..:.x::x-----.x::..x......-------------:...x..:x:.x:....xx..xx.:...x.xx..:.xxx.x...-:....x..-------------------...x...:..x:xxxx.:x.x:.x.x..:x....:x............x:..:-..........---.x.....:----..:.:.....x.....x..x--........:.xx:..x.............x..x.......x.......:..xx.................--.:...x.::........x.x........x..:...:.:.....:........-------------------....x.......-------------------------------------------------:.:...:::x::..:::.:.:.:.-...:x:....:.------------...-.:.x..:--.x::...:x..::.x:..:.x-----------------..xx:.x........x:x::.-.:...::--....x..:-.....---:.:::.x.:.::.x........:.....------------.:.::x...:....x........x.......:...:.:--.......xx:..:.:.:.------.:.----:..:....:...::...:x...x.-......:..x...x..x.:........x::...x..---:.....x...........----....x.:...:x:::..x.x.--------...x.:::.:.:-----........:.......--.:x........:.:..........:......:....-...........:...:..x.-----:..xx:.:...............xx:x.::.x:..x:...:--..........................:.....:....................:x.....:------....x:.............:--.....:..:................-...:..x....::.....................:...:..................-.......:...::.:xx..:.x:x...x.:. 41M3I9M4I5M2I4M11I5M2I18M1D19M2I7M7I12M1I58M5I13M12D12M6I17M1I19M8D3M4D12M1D27M1I19M8I38M1I8M16I6M12I19M2I53M1D6M5I35M7D14M5D9M1I13M3I32M1D20M8D22M10D36M13D14M7D10M2I13M1D14M2I5M22D18M2D6M8D19M33D13M8D27M2D10M6D21M1I43M10I40M2D17M61D12M1I34M9D22M3D27M3D5M3D19M3D47M3D20M7D30M5D9M2D21M4D25M6I75M2I14M26D39M6D12M7D12M1D4M3D17M2D6M1D16M1I31M2D17M1I16M5D13M3I15M3D20M1D13M13D11M16D9M1D16M13I19M4I11M6I19M1I42M5D13M13D44M1I8M19I53M1I10M3I8M4D20M2I70M2I52M19D12M49D24M1D12M12D3M1D7M2D21M17D21M1I7M2I8M1D5M3D28M12D38M2D18M6D3M4D24M1D36M3I18M4D21M8I12M5D16M2I36M1I20M5D41M2I61M6I20M2I25M1D57M1I31M 1705/2502 68.1% 2704/94230402 0.0% 721/2502 28.8% 93133610 NA +3432 chr4 + 190214555 128873225 128873224 128873380 156 TTCCAACATGAATGGATTCCTTAAGAAAAAGGAAAAAA--AAAAAAAAAAGAAAAAAAGAAAAAAAAAAGAAAAAA-----GAAAAAAAGAGAAAAAAGCGAAATAGGTTA--TATTTTAAAAACAATAGAAAGGCAATAAGTTGCGATAAGCTCTTACTATTGA chr4 + 94230402 58527190 58527189 58527348 58527190 58527189 58527348 159 TTCCAGCATTAGTAACTTGCTT--GAAATAGGAAAGGGCTAGCAAAAAAAAAAAAAAAGGAAAAAAGATGAAAAGATCAATGAAGTGAGATGaaaaaatacataaagattaattaattgaaaaaatatataaattCCAAATAC----ATAGGCTCTTCTGACTGA .....:...x.:.::x..x...--....x......:::--.:x.......:........:......:.x.....:.-----...:x:.::x.......xxx.x.x..:...--..x..x.....xx...x...xx.x.x.x::----...:......x:x.:... 22M2D14M2I36M5I30M2I30M4D18M 103/150 68.7% 159/94230402 0.0% 15/150 10.0% 70346035 NA +3115 chr4 + 190214555 128873241 128873240 128873317 77 TTCCTTAAGAAAAAGGAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAAGAAAAAAGAAAAAAAGAGAAAAAAGC chr4 + 94230402 54037025 54037024 54037101 54037025 54037024 54037101 77 TTCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAAC ...:xx.:.......:...............:x:..::xx..::.:x......x.:.:::.:......x:...x.:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 74836216 NA +3056 chr4 + 190214555 128873253 128873252 128873312 60 AAGGAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAAGAAAAAAGAAAAAAAGAGAAA chr4 + 94230402 24042754 24042753 24042813 24042754 24042753 24042813 60 AAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAA ..:..:x....:x.:x...........:.x.:....x...:.......:.x...x..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 104830499 85384056 +3162 chr4 + 190214555 128877232 128877231 128877291 60 AAGTAGGCACTATTATCTCCAATTTACAGATGAGGAAACTGAGGCACAGAGAAATTAAGT chr4 + 94230402 28016190 28016189 28016249 28016190 28016189 28016249 60 AGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT .:...:...x......::...x..........::....::.x.::.......:::.x... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 100861042 89353513 +3276 chr4 + 190214555 128877242 128877241 128877307 66 TATTATCTCCAATTTACAGATGAGGAAACTGAGGCACAGAGAAATTAAGTAATTTGCTCAAGGTCA chr4 + 94230402 82283118 82283117 82283183 82283118 82283117 82283183 66 TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCA ......xx:..x..:.:.x...:........:.:.....:x.:.......:.:.x:.::....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 46594124 NA +3200 chr4 + 190214555 128883017 128883016 128883088 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 52849811 NA +3144 chr4 + 190214555 128883133 128883132 128883180 48 AGACTCTCTCAACAACAACAACAACAAAAAAAAAAAAAAAAAAAAAGT chr4 + 94230402 17752439 17752438 17752486 17752439 17752438 17752486 48 AGATTATCTCAACAACAACAACAACAAAAAAGAATTTTAAAAAAAAGT ...:.x.........................:..xxxx.......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 111130694 79083861 +3004 chr4 + 190214555 128894393 128894392 128894438 46 CACACACACACACACACACACAGAGTATATGTGTGTGTGTATGTGT chr4 + 94230402 94065100 94065099 94065145 94065100 94065099 94065145 46 CAAACACACACACACACGAAAAAATTATATGTGTGTATGCATGTGT ..x..............:x.x.:.x...........:..:...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 34829293 NA +3222 chr4 + 190214555 128901853 128901852 128901897 45 TAGATATGCACATATATGTACACACACATACATACACACATTCTT chr4 + 94230402 58182898 58182897 58182942 58182898 58182897 58182942 45 TATGTATGCACATCTATGCACACACACATAAATGCACACATTCTT ..x:.........x....:...........x..:........... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 70718955 NA +3737 chr4 + 190214555 128928692 128928691 128928774 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGTGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:...........::........x.xx.x...x.............:x.x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 52895495 NA +3701 chr4 + 190214555 128937143 128937142 128937220 78 TGGCACACGCCTGTAATCCCAGCTACTCAGGAGGCCGAGGCAGGTGAATCGCTTGAACCCAGGAGGTGGGGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--....:.:.........::::....:...x.xx.....x.:...........:..x.xx...:..:.. 9M2D67M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 52903941 NA +3252 chr4 + 190214555 128953801 128953800 128953855 55 AAAAAAAAAACAAAAAAACAAAAAAAAAACTTTAAAGGTGCTTTTGACTCATAAA chr4 + 94230402 58504570 58504569 58504624 58504570 58504569 58504624 55 AAAAAAAAAACAAAAAAACAAAAACAAAACCACAAAGGCAGCCTTGACCCTCAAA ........................x.....:x:.....::x::.....:.x:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 70449231 NA +3238 chr4 + 190214555 128969441 128969440 128969501 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGACGGCATGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........x.xx.x.:.xx:.x.......:.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 52936237 NA +3400 chr4 + 190214555 128971892 128971891 128971965 74 GCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::.x......:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 52938688 NA +3182 chr4 + 190214555 128998747 128998746 128998898 152 TGTAAAGAAAAATCATTTTGTAAACTGTAAAGCATCACATAAGTATTTTTACAATTTC--TTTAGGTAGA------TATTTCTAATTATAATTACAATAATAGGAATATTCATTAACCAGAATTTGAAAAGTCTGTAAATGAGAGCTGAAGAGAGGTATG chr4 + 94230402 53783048 53783047 53783206 53783048 53783047 53783206 159 TATACAAATGAGACATTTTGCTAAACG-AAAGCAGGAGATGTTTAAAATCAGACTTTCCATTTAGCAAGAGCAGTGTAATTGTAGACATGATTAAAAAAAAAAAAAAATCCATTAAGTAGCTTTTGAAAAGTCTGTAAACAGCTTTTGAAAAAGGGGATG .:..x.:.x:.:x.......:x..x:.-......xx.x..:xx..xxx.:.x.x....--.....xx...------..x..x..:x:..:....x..x..x.::..x..:......x:..xx.................:::xxx:....:.::..x... 27M1D30M2I10M6I84M 98/151 64.9% 159/94230402 0.0% 9/151 6.0% 75215699 NA +3331 chr4 + 190214555 129009374 129009373 129009443 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:...........::........x.xx.x...xx::x.........:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 52976177 NA +3644 chr4 + 190214555 129033426 129033425 129033530 105 GCAGCAAACCACCATGGCACATGTA-----TACCTATGTAACAAACCTGCATGTTCTGCCCATGTATCCCAGAACTTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 13642906 13642905 13643015 13642906 13642905 13643015 110 GCAGCCAGCCAACAGGGAAGCCGTAAGTGTGACCTATGATTTAAAGACACATTTTCTACCCATGCATGCCAGTACATTGGGGGAAAATAGAAAAAAGAAAAAAGAAAAAA .....x.:...x..x..x.xx:...-----x.......xxx:...xx::...x....:......:..x....x..x.x::.x:....x.:......:......:...... 25M5I80M 73/105 69.5% 110/94230402 0.0% 5/105 4.8% 115390520 74824035 +3071 chr4 + 190214555 129037145 129037144 129037190 46 CTTTAAGTTAAAAAAAAAAAAGAAAAAAAAATTCTGTTCATCAAAC chr4 + 94230402 44684115 44684114 44684160 44684115 44684114 44684160 46 CTTTAAGTTAAAAAAAAAAAAAAAAAAGGATTTTAGTTTATCAGAC .....................:.....::.x..:x...:....:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 84353030 NA +3164 chr4 + 190214555 129083054 129083053 129083120 67 AGTGGCATGCGCCTGTAATCCCAGCTATTTGAGAGGCTGAGGCAGGAGAATAACTTGTACCCGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....--...:.x....:.:.......:....:........x.xx.x...xx.....x....:.:.. 5M2D60M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 53049854 NA +3051 chr4 + 190214555 129083187 129083186 129083244 58 AAAAAAAAAAAAAAAAAGAATAAGAAGAAAAGAAAAAGAAAAAAAAGAAATAACAAGA chr4 + 94230402 22048467 22048466 22048524 22048467 22048466 22048524 58 AAAAAGAAGAAGAAGAAGAATAGTAAGAAAAGAATGTGATTAAAAGGAAGTAACAGAA .....:..:..:..:.......:x..........x:x..xx....:...:.....::. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 107034720 83179835 +3041 chr4 + 190214555 129087750 129087749 129087801 52 CAAGTTAAAAAAAAAAAAAAAAAAAGGAAGAAAAAAAAAGAAAAGCAAAAAA chr4 + 94230402 77835375 77835374 77835426 77835375 77835374 77835426 52 CAAGTAAAATAAAAACAGAAAGAAAGGGAGAAAAAAAAAGCAAATTATAAAA .....x...x.....x.:...:.....:............x...x:.x.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 51252375 NA +3037 chr4 + 190214555 129118919 129118918 129118965 47 CACATCCAAAAAAAAAAAAAAAGAAAAAGAAAGAAAAAAGAACAAAA chr4 + 94230402 21345703 21345702 21345749 21345703 21345702 21345749 47 CACACCAGAAAAAAAAAGAAAAAAAAAAGAAAGGAAGAGGGACAAGA ....:.x:.........:....:..........:..:.:.:....:. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 107773216 82441339 +3028 chr4 + 190214555 129143646 129143645 129143707 62 TTTTTTTTTTGTGTGTATGTGTGTGTGTGTGTAT--ATATATACATATATATTCATATATATAT chr4 + 94230402 85834532 85834531 85834595 85834532 85834531 85834595 64 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ..x..:x.......x.:.................--..:..x:....:....x:.x...:..:. 34M2I28M 48/62 77.4% 64/94230402 0.0% 2/62 3.2% 43309114 NA +3033 chr4 + 190214555 129143647 129143646 129143684 38 TTTTTTTTTGTGTGTATGTGTGTGTGTGTGTATATATA chr4 + 94230402 33250995 33250994 33251032 33250995 33250994 33251032 38 TTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATA ...............:.....:.:.:............ 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 95892652 NA +19772 chr4 + 190214555 129180562 129180561 129180982 421 AAAGGTTTCTCAGTAGGGTTGCCTTGTCATACACTTCTGTAAATGGGAGTTTGGAAACTTTAAATGAAAGAGTGTATAAAGTTTTCTTTGCTGAGTGTTATTAACT-GAGGGACTCTGGATTAATTTAGCATCCAGGTCTGTTCTTTCAGCCATAAGCCATGCTGTCAGGGAAACTTAATTATACTTTAAGTGGGATGCAAATGAGTTGTGACACAACATCATCTCACACGAAAGGTTCATTACTTACATTAACTTGCACAATGTTCACTCTTAAGCCTAGGACTCATTACAATATTCGCGGGATTATATTTTGTAAACATTGTTAAATGCAAGTGGGGTTTTAACTTTTAATA--------------ACCTGTTTCTTTCTTAGT-ATTTAAGACTACAAATATTCACTTTATTAAATGATTATGAATTGAACTAC chr4 + 94230402 26665886 26665885 26666302 26665886 26665885 26666302 417 AAAAGATTCT--GTGAAGTT-CCTTATAGTGCCATTTATTAATTGTAAGTTTAGGAGCTTTAAATGAAAAAGTGC-------TTTCTTTGCAGAGTGTTATTAACAAGAGGGATTCTGGATTAATTTAGCAGCCAGGTTTGTTCTTTCAGCCATAAGCCATGCTGTCAGGGAAACTTAATTACACTTTAAGTGGGATGCAAATGAGTTGTGACACTACATCATTTCACATGAAAGCTTCATTACTTACATTAAC-TGCACAATGCTCTCTCCTAAGCATTGGGCTCATTACAGTTT--------TTCTGTTTCTTTAACATCACTACATCTGAGCTGGGTTTT-ACTTTTAATATATCTTTTCTCACTGCATGTCCTTTCTTTAATCATTTAGGCTTTAAGCTGATGAGTTTATTAAATGAGTTGAACCTGAGCTGC ...:.x....--..:::...-....:.x:.:.xx..:xx...x..x:.....:.:.:............:....:-------.........x.............x-......:.................x......:...........................................:................................x.......:.....:.....x..................-.........:..x...:.....x.x..:.........:.x.--------..x.:...:x.x.....:::..x..x::..:x.......-..........--------------:.x...:::..::...:.-.....:.x:.xx.:x.:x.x.x............x.xx:.x:...:..:. 10M2D8M1D54M7D24M1I147M1D41M8D39M1D10M14I18M1I50M 320/401 79.8% 417/94230402 0.0% 36/401 9.0% 102514676 87699879 +6569 chr4 + 190214555 129193690 129193689 129193902 213 TACAAAGATGAAAAATCAGTGCAATTGGAGAAAAAAACAATGGTTTAAAACACTTTGGAAGAAAAGAAAGTATCCCAATAAATCACTTGTCATTGTGGATAATAGAATACTGCATCATCTTCTATGAGCTAGAATAAAG--GTTAAAACACTGTGCTTGCTCTCTAAACTCTATGATCTTGCTGGCATATTCAGTAGTGGATTCTATCATTACGG chr4 + 94230402 26670807 26670806 26671008 26670807 26670806 26671008 202 TATAGAATCAGAAATTTGGTACAGTTACATAAAAGATAAGTAATT-AAAACAGT-------AACAGCAAGTATTCAAAAAAATCACTTGTCAGTGTAGGTGATAGAATATGGCATCATTATCAATCACCTAAAGCAAAGATGCTACAGAATTGT--TTACTC---AAACAGTATGAACTTGCCAGAATATTCAGCACTGGCTTCTATGATTGCAG ..:.:.:x:::...x.::..:..:..:x.x....:.xx.:.::..-......x.-------..x..x......:.x..x.............x...:.:.:........:x.......:x..x..x.x...:.::....--.:..x.:x.:...--..:...---....xx.....x.....::.x........:.x...x......x...:.:. 45M1D8M7D78M2I13M2D6M3D50M 141/200 70.5% 202/94230402 0.0% 15/200 7.5% 102522883 87691672 +8594 chr4 + 190214555 129202323 129202322 129202588 266 GTGATCACTTTAAGCTTGTTATTGAATCTTTGTCACAAAGTGTGTGCTAATATTATTCTC-TTCTAGACATAAGAATAGAAGCA-GAGAAGGAATTTAAATCAATAAAGCTAACAAATAAATAACAAGCTGGAGAAGTGGAACTTGTCACTTA-AGAACGTGAGGTGAAGGGCATATTGACAGTTTCTGATAACTAAGTAGATAGAGTATTGATAGCCGAAGTCATTATGAAATGAACG-CTTACTGAGATCATGTTTACATAAAGTTGT chr4 + 94230402 26672335 26672334 26672604 26672335 26672334 26672604 270 GTGTTCACTTTGAGTAGCTCACTGCATCTGTGTTGTGGGGCCTCTGCTAATATTATTCCCCTTGTGGATATGCAAGTGGAAGCTTAAGAAAACACTTAAATCAATGAAGCTAACAAATAAACAGTATGTGGCTGATGCATGGCCTGTCAGTTAGAAAATACCATGTGTAGGTCATATTGATGTCTTCTGGTGTAGAACCATACTGATTATTGACAGCAGAAGTCTGTGTGTGATGAACATCTAATTGGGATTATGTTTACAGGGAACTGT ...x.......:..:xxx.:.:..x....x...::::::.:x.x..............:.-..x.:..:..:x:.:.:.....x-:....::x.:..........:...............:.::.x.:x.xx..x.::x::.:.....x...-.:..:::x.x...x...x........::x:.....:.:xxx..x:.x.:x..x......:...x......xx.:..x:......:-..x.:..:...:.........x::.::... 60M1I23M1I68M1I85M1I30M 175/266 65.8% 270/94230402 0.0% 4/266 1.5% 102529988 87684567 +3536 chr4 + 190214555 129215043 129215042 129215129 87 TAACAAAAATTTAAAAAGTAAAAAAATAAAAAGAAAAAACTTTAGAATAAATATATAAACAAAATATTTTATAGCACAAAAAAAAGA chr4 + 94230402 29756731 29756730 29756815 29756731 29756730 29756815 85 TAAAAAAAATATGCAAGTTAAAAAAAAAAAAAAAAACAAACCCAGAAAAAATACTTAAACAGA--ATTCCACAGGaaaaaaaaaaaa ...x......x.:x..:x........x.....:...x..x:::....x.....:x......:.--...::.:..x.x........:. 63M2D22M 62/85 72.9% 85/94230402 0.0% 2/85 2.4% 99458312 90756243 +27310 chr4 + 190214555 129218290 129218289 129219430 1141 TTTTCATAGGCTTTCTTCTG-AATTTGCCATTTTGCTAATGAAATTCTCATTTTAGTGTG--AGTTGTATTTCTCAATAAATAACCAATAGACACTCTATATGT--GCTCTAATAACCCTTGGTAGTTGCAAATATTTTGATTTTACAGAATATCTTCTCTAATACTGGGTTTTCTAATACAG--AAAGTCAC---------CTACAAGACTTT---CCAGGGCTATAATAACCCTC---------CAGGTTT----GGCTATTC-TTGTCATCACAGTTTCCTGGAGATGGCAGCAAAGTACGCAGAAGCAAGG------------GCACCAACCGTAACACATAAACAAGTGGTGAGATTAATGGCGCTGTGCAGTTCTGAGGATGACTGACGAAATGCATCAGCCTCTTCTGCTCTCAAATGACAGGGCAGGTACATAGAGAGCTGATATATGTATTAATTTTATTTTTAATTATGTTGGGTAGGTTTCAACAAACCTTGAACAAACTGCTTTTATTTTATTCCTCACCTGTGGTCAAGTCCAAGGCTTTCCTGTCTTTCTGTTTATCCATCGCTCTCTTTTCTTTTCTGGTAAAAGTAT-TGAGAGATCTCCAGAACAAAAATC----TTTTGAAACCTTTATTTTA--------------TGGACCAATCTACAACA------TTTGTTATCCTTACTTCATTTTCATACAGCTATTTCTAATCTTGTAGCACACTGCATTTCAATCCCTCTGGGTTGTCAGATTTTCTGAATCTATAATGGGATGATTAACTGGCAAGGCAATGCACAGGCTAATAACAGATTGCAAAGGACATCATATTAGACATTGTAAAAGCCCTCTTTATTCCAAAGTATACATCCAATAATACCCCAGCAGACATGAGTAATGAGCATGGTATCCAGAATAACAGGAACCCTATCGCTTTGGAATTCATGCAGAAATGTTATTAAAATGAAAAAGAGAGAACTTCTTTCTACTGAATTGCAACTGTTGGTTTCAATGCTAAACTTGTTTGTCAAAATGCTGTTGCCTGGAATCAGTGGAAGCTTATATATGACTGAAATATTTCACAAGTTGGTTGGGTACTATAAGAAATCTTGTTTGGGAAGAAACTAAAT-GAAAGGCTTTT-TAAATTTAAAGATCCAGTGTTTTTCAGCTAAAATGTACGACTATCTTTTAAGGCTA chr4 + 94230402 26675061 26675060 26676189 26675061 26675060 26676189 1129 TTTTTACAGCCTTGCCTCTGTAATTTAGCATTATGCTAATTAGGCTATTATTTTAAAGCACCACTTTACTTTCCTAACAAGTAGCCTGCAGCTTCTGCATCTGTAAGCCATCTTGACACCCA-TGCTTGCCAATGTTGT----TTGCAAACAGACTTCT-----GGTGAATTTATTAATGAAGCTAAAGCCATGCTTACCATCTGAAATATTGTACCTCAGAGCAA-AGTAACTTTTAGTTGATTACAGGTTTTTTAAGCTTTTCGTTATAACCACAGTATCCTGCAGGTGGCAGCAAAGTACATACAAGGAAAGTAAAATGAAGTAAAATGAACATTAATGCATAAACTAGCAA-GAGATTAATGATGCTATGCAGTACTGA---TGACTGACTGAATGCATCAGCCTTTTCTAGCTTGAAATGACAGTGTAGGTAAATAGAGGGGTAATGTGTTTATCTGTTGT-TTTTTAATTATACTGGGT---------------TTGATCTCAATGCACTGA----ATTGCTTAGCAG-----AAGATGGGGGTTTTCTT---------------------TCCTTTTTCTCTCCCAG---AATTATATGAAAAAGAAGCA-AACAGAAATAGCCATTTTTATTTTTTTGTTTCAACGTTGTGCCCCAGTGTAACAAAGTTCAAAACCTATCTTTGCTAGTCTTCCTGTATTTTCAAATAGCTTTTCATCATTTGGGAACATGC-ACTTTTCAATCCCACTTGGTTTTCATGTCTTCAGCATTCTTAATGGTATCATTAACTTGCAAGGTGATTCATACTTTAATAACAGATTACAAAGGACACCATATTAGACATCCTAAGAGCGCTCTTTACTCCAAAGTATACATACAATAATGACCCAACAGACATGAGTTATAGCTGCCGTACCTTGAATAGCAAGAACAAT---------GAGCGCTGGCAGAAACATTATTAAAATGAAAGGGAGAAAACTCCCGGCTGCCAAATTGCAACTGTTGGTTTCAATGTTGAACTTGTTTGTCAAAATACTGTTGGGTAGAATCAATAAAATGCCGCA----GTCGGAGTGTGCTGCAGGTTAGCAGTCTAATGCAGGAAAGTTCACTCTAGATCGATCTAAATGGGGATGCTTTTGTAAAGAATATAATTTAACCTTTT-----GGAAATGTATAGCTGGCTTTTTTGGTTA ....:.:..x...x.:....-.....:x....x.......x.:::.x.:......:x.::--.x..xxx....::..:..:..:..x::..x:x..x:..x...--..:x.xx.:..x.:::-.:x....x...:..x.----..:..:.xx:x.....-----:x..::...x:....:x..--....:..:---------..:x..x.:.x.---:...:..x.-.:....::.:---------.......----:...x...-..:.x.:......x.....x..:..............::.x...x..:.------------:x.:x...xx...::.......x..:::-..........::...:......x....---........x:.............:....:x::.x.........x.:.....x......:.x.:..:.:.x...:x:..x.-...........::.....---------------....x.xx.x...x:.x.----...x..:.x.x.-----...x:x::..:....:.---------------------..::......:.:.::.---..x...-...:.:.xxxx..-....:....x----....x.xx::...:...:.--------------..x.x...xx.x...x.------....:..x:...x..x:.......x.:....x..:x.x..:.x.x.:..::.-:.x..........x..x....x...x:.:...x.x..::x......x..x.......x......::..x..:.xx:............:.........:............:x...:...x.......:..............x.......:x....:...........x..::x:::x...:.:x.....:..:....xx.---------..::x.xx.......::..............::....:....:.:xx..:.::.......................:.:.................:......xx.:......:.::..xx::::.----:::.:.:.:.x:::..:...:.:x.xx..x.::.:....x:.:::.:x:..xx:.x......-.::.x......-....xxxx.x:..::.::x....-----x:.......:::..:x.....xx..:.. 20M1I39M2I42M2I16M1D16M4D16M5D19M2I8M9I12M3I9M1D10M9I7M4I8M1I49M12I28M1D27M3D80M1D18M15D18M4D12M5D17M21D17M3D6M1I13M1D10M4I19M14I17M6I52M1D202M9D126M4D62M1I11M1I23M5D28M 726/1057 68.7% 1129/94230402 0.0% 156/1057 14.8% 102543229 87671326 +26386 chr4 + 190214555 129233774 129233773 129234619 846 AAAATGAAATGGGCTTAA----TGGACTGA----GGCTTTGACTGATTCTCATAGCTCTGCTGCATGGTCACCAGTTGCTTCTCCTGGTAATTTACAAGGTTTCCTGCTGTATGATAAAACACAGGTGCTCAGGCTGTCATCCAGAGAAATGATTTATT-AGCTTTAGTGGTACCACAGACCTCAGGCAGCAGGCACTAAATCAAGAGAATATATACTGAAATAATATGTTTTCCAATGATGACCCATGGAGACTCTTTAGTTGTTCATGCCCTTTACCCACTGCTGTTG-GTTTTGCCATT-TCTCCTCATTATTTTAAAGCCCACAGGATTCACTTCCTGTCTTAATTTCTCACCTGCCAGGACAGCCTCAGCACCAGCTTTATTGCTATAGATTTCTAGTTGATCCTTCACACCACCAAAGAGTTCCAGCTAATGAGTAGGAGAAAGGGAACCCCAGGG-------GCTTTTTCAGGCCTTAGGATGCTCAGAATCCATATTCCGGGCTTCACTTTGATA-TCGTTGCCAGACAATAAAAGCTCACATTGGCCTTTCAAATAATTCTGCTTTGAGGTTAAGTATGTCTGGACATTCATTTGGAACATTTCATCTACTGAATTTTTCTTCATGGAAATTTGTTAAGAGGTCCTGCCTTTCTATTTTCATGACAGAGACTATCAATCAAAGTGACTTCTTCTTGATTATCAGAGAGCCCTATGAACATATTAGAGAAATCTTTAATTACTATTAAATGCCTGCCAAACATGGGCACAGGAAAAAATCACTCAGTCAATCAAAGTAGAAGCTTGGTGTGGACTCTGAATTTTAATGAGAAGACAGAGCAGAGTTGTAAAGGGAAT chr4 + 94230402 26681130 26681129 26681951 26681130 26681129 26681951 822 AAAATGAAATGAACCTAACCAGTGTGCTGATAAGAGATTTAGGAGATTCTTCCAGACATGCTGTATGGTCTCCAGTTGTTTCTCCAGGTAATTTACGAGGCTCTCCCTTGTTTGATAAAGCACAAGCGCTGAGGCTGTCATCCAAGGCAGTTACATATTTATCTTTTATGGTACCATAGACCTCACATAACCAATGTTACCCTATGTATGCATATATGGGAAATA-ATGTTTTCCAGTGATGACCTATAGAGACTCTTCAGCTGTTTTTGCCCTTTCACCATCACTATTGCTTTTTTTCATTATCTCACCATTCTACTGAAGAC-ATGGGATT---------TCTTAATTTCTTAGCTGTGAAGGTTGCTTCACCACTAGTTTTATTGCTATGGATTTTCAGCTGGTGCATCATACCACTAAGGAGTCTAAAGTAATATTGACAATGTGAGACACCCTAGGGAAAGTAAGATCACTAAAAAATTGAGGTGGTTGCAGCAATTGTTC-----TTGTCTCTGGTGGTCTGTACCA----------------------TCTTTGAGCAACGTTGACATGTGGTAAAA-ATGTCTCTGTCATAGTCTGGAACAT--CATCTA--GAGCTTTTCTTCAATGAGATTTACTTAAAGGTTTTATCTTACAGTTTTCATGACAGCAACTATCAATCAAAGTCGATTCCTCTTGATTGTCTGTGTACTCTTTGAATAGACTAGAGAAATCTTTAATTACTATTAAATGCTTGCCAAGAGTGGACATAAGGGGAAAAAAATCTGTCAGTCAAGGTGCAAGTTTTGTGTAGATGGTGAATTATAATGAGAGGACACTTGAGAGAAGCAAAAAAAAT ...........::.:...----..x:....----:.x...::xx......:x:..x:x.....:......x.......:......x..........:...:.::.:x:...x.......:....:.:...x.............::.x.:.x.:x....-.x....x:........:........x::.:.x:::::..xx::.x.x:x::.....:x.:..xx.-..........:........:..:.........:..:....:x........xx...:::..:...-x....x:....-....x:....x.x:.:...x.-.::.....---------...........:.x...:x.:.::x..:...x...:..:...........:.....::..:..:.x.x...:.....:..:....::x.:x....:xxx.x:.x:x::.:x....:....-------.x.:x:.x.::xx..::.:..x.::x.::xxx.:...-----..xx..:..:.:-..xx.:...----------------------::..::.::..:x:..x:x..x...x..:-......xx::xx.x:.:........--......--..::.........xx..:....::.x.:....::.::...x.x:............x:...............x:x...:........:..x.x.x:.:..x....:.x.:.............................:......:x:...:..:.:.:::...xx.x..x....:....:..:x...:..x....:..:xx......x........:....xxxx....xx.:...:::... 18M4I8M4I125M1I65M1D64M1I11M1I21M1D8M9D120M7I37M5D12M1I9M22D29M1D25M2D6M2D245M 546/803 68.0% 822/94230402 0.0% 62/803 7.7% 102552644 87661911 +24128 chr4 + 190214555 129245012 129245011 129245590 579 AAGACGTGTGTCTTGATGGGAAACAAGGGACAAGGAACATAATGAGATTCATCT-GAGGGGGATTTGGGACTTAACTCCTCTTCATGTTGGAGTGAAACCAGATTCATAGCAGTAGAAGGACTCTATAAACATAATTCACTGAAATGAGAGGGTGATAAAAAGGTCCTTTTTCTTGCCTTTTGCA----GGGATAAATTACACCTGAAGCTACAGAAATGTTCTTTTCTAGTTTCAGATTAAGTGTGCTTGTATAATAAACATTTCTGTAACACTTGGCTTCTTTAACCTCGACAGCTCAATTAGGGCTGTGCGATAAAATACAACTTCTATGCACTTTGTGAACACTTAATGTGACTGAGGGCCTGTTAGCAAGAAATCTCACAGAAAATAGGTCTTGACAAGTATTCGAGGAAATTGAATTGGCATTGTGTTTAATGAATATATATATATATATATACACACACACACATACATATATGCATATACATATGTATATTCTTTAAAACTCTGTGTATTCTGATTATAATGATATATGTGAGTCTCCTTTTTTGTGTGAAAATCTCTTATTCATTATCTTTGCTA chr4 + 94230402 26682634 26682633 26683169 26682634 26682633 26683169 536 AAGTTATGCAACTTGGCCGGAAA-----GGTATCAAATGTAATGAGAGCCAGCTTGAAAGCTATTTGAGACTTTGCTCCTTTGCAGTTTGGAGTGAAAGCAAATTCTCAGTTGTAAAGGAGCTCCATAAACATAATTCACTGAAATGAGTGGGTGATAAAAGAACTTTTCTTTCTTTTTTTTTCCCCCTAGAATAAATTACACTGAAATCTACAGAAATGTTCTTTTCTAGTTTGAGAGTAAGTGGGCTTCTATAATAAACATTTCTGTAACATACAGCTATTTTAGCCCAGACAGCTCAATTAGGGTTGCGCAGTAAAATGCAACTTCTGTGCACTTTGTGAGCACTTAATGTGACTGAAAGCCTGTTAGCAAGAAATCACACAGAAAATAGGTCCTGTCGAGTGTTTAAAGAAATTGAATTGGCAT------------ATATTTA---------------ACTCACAGGTCTGAAAAGCAAGAGATTTCTGGCTG------------CTGAGTAATTTAATTATATTGTCATATTTGA----CTTTTCCTGTTTGAGCCTCCTTTATTCATTATTTTTAATA ...x::..::x....::x.....-----.::.xx:..::........x:..x..-..::.xx.....:.....x:.....:.x..xx...........x..:....x:..:x...:.:.::...:........................x...........::::::..:..::.x::....x.x----:.:...........:x:..x.........................x...x......x....x......................:x::...x:....:..:x................:..:..::......:........:............:................::..................x...............:..x.:...:..::.:................------------....x..---------------..x....x:.x::x.x.xxx.x.x.:x.x..xx.:------------...x...x.:.:......x..x:....x...----.:...::...x...:xx..::...........:...:x.. 23M5D26M1I130M4I239M12D7M15D35M12D31M4D40M 399/531 75.1% 536/94230402 0.0% 53/531 10.0% 102562378 87652177 +3096 chr4 + 190214555 129249952 129249951 129250021 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 53216755 NA +3784 chr4 + 190214555 129256262 129256261 129256347 86 CATGGTGGCAGGTGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCACTTGAGCCCAGGATGTGGAGGCTGTGGAGC chr4 + 94230402 76033197 76033196 76033280 76033197 76033196 76033280 84 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC ..::....:--.::.x....:.:...........::........x.x:.x...x.......:.....:.xx.xx:......:..:. 9M2D75M 60/84 71.4% 84/94230402 0.0% 2/84 2.4% 53223065 NA +3012 chr4 + 190214555 129256399 129256398 129256450 52 AAAAAAAAAAAAAAGAAAACACACACACACACACACACAACAAAAACAAAAA chr4 + 94230402 87234408 87234407 87234459 87234408 87234407 87234459 52 AAAAGAAAAAAAAAACACACACACACAAAAAAGCCCACAACAACAACAAAAA ....:.........:x.x.........x.x.x:.x........x........ 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 42021991 NA +3064 chr4 + 190214555 129273799 129273798 129273872 74 GTGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........:x::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 53240595 NA +7704 chr4 + 190214555 129282190 129282189 129282418 229 TCAATAGAGGTACGATTATCTTATTTTATATTTC---TTCTCCTGTTATTTAAATGTGGCAGCTGTAACTAATTTGGATATCAACCACCTACTGTGTCGTGCACATCTCTGT-AAAACTTTATTGTACAATCTGGAATATATCTAAAAATATCCAGGAGTAAATA--TATCATCATTAACCTGTCATATATAGTGACAGTCTTATAGAAATGTAAA-------AAATGGAAGCAAACTAAGT chr4 + 94230402 26692818 26692817 26693058 26692818 26692817 26693058 241 TTAATAAATCTATGCATGCTATGTGTTGTACTTTCATTTCTTCCGTTGTTTCAGGCTGGCAGCTCTAACTAAATTAGATGTCAAATACCTGCTGTTTTTTCCTCATCTTTATTACAACATTATTTGACATTGAGACATCTCTCTAAAAGTATTCAGAAATGAATTATTATCATAATTAGCTTGTCAAAGATAGTGACAGTCTTATGGAAAAGGGAAGTAAGTCAAACAGAA-CAAATCAAGT .:....:.xx..:.xx.:::x.:.x..:..:..:---....:.:...:...x.:xx........x.......x..:...:....x:....:....x.:x.x.x.....:.:.-.x...x.....xx...x.xx.:x..x.x.......:...:...:.:.:...x--......x....:.:.....x.x................:....x.x:..-------...::...-....::.... 34M3I75M1I52M2I49M7I8M1D10M 161/228 70.6% 241/94230402 0.0% 14/228 6.1% 102589372 87625183 +5160 chr4 + 190214555 129326925 129326924 129327120 196 ATCTTGACTCTCCC-CTGCCAGGGCAGGCTTGTTCACCACACTGCTTCCTTG-AGTGCTTTTGTCCAGTCCTGTTTTAAATGACCCAGGCAATGGAGCTCAATCCTTTTCCCTTGAGAGGCCATTTGGCAGTCTAATAGGCTTTGCTGTTAGCAAACTCTTCCTTGATGTGCTGCCTAAGTTTTCCTTTGCTCAATTT chr4 + 94230402 60839891 60839890 60840073 60839891 60839890 60840073 183 ATCTAGACTCCCCTTCTGTTAATGCAGAATTGTCCCCTGCAGTATATTTTAGCAGTGCTTT-GTCCAGTCTTGCTATAAATGTCTCAGACAATGAGACTC---------CCACTGAAAGATTACTCCATAGCCTAATAGAT----CTGTCAGAAAGATTTTCC-TGAAACACAGACTATATTTTCCTTGTCTTAATTT ....x.....:..:-...::.:x....:x....:.x.::..x.::x.::.x.-........-........:..:.x......x.:...:.....:::...---------..x:...:..:::.:.:x::..:.......::----....:..x..:x.:....-...x:::.x.x...x:........xx..:..... 14M1I37M1I8M1D38M9D32M4D18M1D34M 122/181 67.4% 183/94230402 0.0% 17/181 9.4% 68487034 NA +17914 chr4 + 190214555 129335273 129335272 129335733 461 AGAGTCCTGGCTTATTAATGTACCTGACTTTTCCAGCATTTATCACAAATGTAAATGAACAGTCTGTGGTGTAGCCTGTTTTCAGGATTGCTCTGATGATCATGTTGCTATGGTGATAACAGAGCATACAGGTTCATGAGACAGTATTAGTAATGCAGCAGCTTGAAACTTAATCAGCGCGCTGCGACTTCTCCCCCATATTTCAATACCACTTC-GGCAAATTGAATTCCAGGCAGTTGTCAGTCCGATGTATTCCCCGTGGTTTCTCCTCTGCAAAATTG-CCTCTTTATTCTATACACTGATGATCATGGAGTAATTGAAATCTGCAGCTGTTTGTCATGCTATTTATACAACTCTGTCTTGTAGCCAGCAACCTTTTTATGGCACGCACTGCAGGTAACAATTAGATCTAGAAACCTTTTTTTGGTTGAACAAGTGAATGA------TTGTTTTTCCCAAAATAC chr4 + 94230402 26705342 26705341 26705793 26705342 26705341 26705793 452 AAAATTTGGGCTTATCAA-ATCCCAAGTCCCTGCAGCATCTATCAGAGATGTAAATGAGCAGT-GGCAGTGCCAC--GCACCCCGGATTGCGCTGATGATTGCGTTGCCATGGTGATAACAGAGCATACAGGTTCCTGAGGTGGCATCAGTAATGTGGCAGTTTGAAACTTAATCAATGTTCTGCTACTTCT---CTGTATTTCAATATCACTTCAGGAAAATTGAATTCTAGGCAGTTGTCAGTCTGGTTTATTTCCTATGGATT-TCTTCTACAAAATTTCCCTCTTTATTTTAGACTCTGATCATAATACAGTAATTGAAATCGGTGGTGGTCTGTCATACTAATTAGATGA--CTGCCTTGAAGCGGGCAGCCTCTGCTTGTCGTGTTCAGCAG----CAAACCTGTGTGAAA---TATTTTGGGCCAAACACTTCAGTAACAATTTTTTTTTTGCCAAAAATAC .:.:.::x.......:..-:.x..x::::::.x......:.....x.:..........:....-x.::...:x:.--.:x::.x.......x........:::.....:..........................x....:::.:..:.......::....:..............::.:x....x......---.::..........:......-..x...........:...............:.:.x....:..::...x..-..:...:.......x-..........:..x..x.....x..x..:x.............x.::.:x..:......:...x...x.::.--...:....x...x:...:...:.x:x..x.::.:x.x....----...x:xx:.x.::..---.x....x..:::....xx.x.:.:.------..x....x..x....... 18M1D44M1D11M2D115M3D20M1I50M1D15M1I72M2D41M4D15M3D25M6I18M 325/444 73.2% 452/94230402 0.0% 25/444 5.6% 102629931 87584624 +28810 chr4 + 190214555 129343084 129343083 129343658 575 GAGTTACAGTAATAGTTTGATTCAACTTCCTTATACA---GACTGCTGAGCAACCAGAGAGCCAGAGAGGTTTTTTCTTTTCTTTTTTTTTCTCCCCGAAGAATTGGACTGCAACTGTTTTGAAACTTTCTTGGGGGAAATGCAATTATTGACAAGATTTAATAAAGCCAAGACAACTGAATGTGATGAGATGAACCCCTATTCTTTTGTTCTTTCTATGCAATGTAAGAAAATAGCAAGAAAACGATTACATTATAACTAAATGAATTAAACAAAGCTCCGAAACATAAATTAGAATTTAACTATGCCATTAAAAACTAATTTAATTTGCAAGGCATCATTACTAGGTAATAAAGACCCATTGCAAAATGTACAGCAATATCTTGTGAACATGTAAAAAAAA---AGTGATAAATCTCATTGAGCAGATGAGTTTCTGTTGCATTAGCAGAT-----ACAAATGCTGAATAGATGTTTCAGTATATAATGAAAGCTAGCAAGTAATGGAACGATTGGTTTCGTTAATTTTTTTTTTTTTGCCGTAAATGGTTTTGTAGTTAAGGAAAGGCCTCAGGGAGAGTTGG chr4 + 94230402 26707761 26707760 26708309 26707761 26707760 26708309 549 GAGTTACAGTAACTGTTCTGTTTGACTCCTTCAGGCCTCCGAAAGCCAAGCAACAATATA-------------------------CTCTGCCCACTCAGATAA---GCCTACAGTAGTTCAGAAAGTTTCTCAGGG-AAATGCAATTAGTAACAAGATTTAATAAAAGCAAAATAACCAAATATGAGGAGTAGAGCCACTATTCTTTTGTTCTTCCTATCTAATGCAAGATAATAGTGAGAAGGCAATTACATTACAACTAAATGAATTAAACAAAGCTCCAAAACATAAATTAGAATTTAACTGTGCCATTAAAAACTAATTTAATTTGCAAGCCATCATTACTAGATAATAAAGACCTACTGCAAAATGTACAACAATCTCTTGTGAACACAAGAAAAAAAGCTAGCAATAAATCTTGTTGAGCAGATGAGTTTCTGTTACATTAGTGGAGGGGAAAAAAATGCTGAATGGATGTTTTAGTGCATAATGAGAACTGGGAAGTAATGGAACAATTGGGCAGCTTAA--------TTTTAGCCATAAGTGGTTTTATAGTTAAGGAGTGACCCTGGGGAATGTTAG ............:x...:x:..::...:.:.:.x:.x---..xx..::......x.x.x.-------------------------:.:.x:.:x.:.::.x..---.x..:..::x...:x....x.....::...-...........x.:...............:x...:.:...::...:...x...xx..:..x................:....x:....:....x.....::....::.:.........:.........................:......................:.............................x............:...........:.:.............:....x...........::x:.......---..::........::.....................:......::..x-----.x...........:.......:...::.......:.:..:.x............:.....x:xxx....--------....x...:...:.......:..........:x.:..:::....:x...:. 37M3I20M25D18M3D30M1D266M3I47M5I69M8D51M 425/538 79.0% 549/94230402 0.0% 48/538 8.9% 102635323 87579232 +3580 chr4 + 190214555 129347882 129347881 129347960 79 GTGGCACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGATGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:.........::::........x.xx.x...x.:..............x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 53314681 NA +12768 chr4 + 190214555 129357512 129357511 129357844 333 TTATTTACACTTTCCCAAAACTGAATGGCATAAGGCACTTATTAGTCCATAATTCAAACCTGTCCAAGTCATTGTTAGTTTTATCATTTTCCTGCCTTGTATCGACTGAATTTTTCCACTTTGTGTCACCAGCACATTTCATCACCTTACTGTATTTTCTTTCTTTTAGGTCAGCAAAGTAACCAAAATCAATACTAATGCTGATCCATATGACATGCCACAAGTCACTTCCCTCAATTTGGTGATGCTGCCACTCAACAAATAGATATCTT-TGGCTTCAATATCCTATCCAGGTTATTATCCACTTCAGCAACTTGTTTCTTATGGTTCACA chr4 + 94230402 26714314 26714313 26714634 26714314 26714313 26714634 321 TTATCTTACCTTTTTCTAAATTGAATTGCGTAAGGCACTTATCTGCCCATGATTCCAGTCTAGACAAGTTGTTGTGAATTTTATTGCTTTCCTATTGTGCATTTGTTGA-TTCACCCATTTTGTACCATCAGTACATTTCATCACTTTACTGCATTTTCCTTCTTTCAGGTTTGTAAACTAAACAAAGTCAATACTAA-------CCTTACGGTATTCCGCAACTCAACTCCCTTCATTCGGAAGTGCTTCTCAT-----GCTAAGTACCTTCTGGCTCTGGTGTCCGAGATAGTTTGTTACCCATTCAAGCAGCTCACCTCCTATAGCTCACA ....:.xxx....::.x...:.....x..:............:x.:....:....x.::..:xx.....::....x.:......:::......:::x..:..:x::...-..:x:...:.....::..:...:............:......:......:......:....:x.:...x...x....:..........-------..x..:.::..x..:...x...x:.....:x...:..x::....x.:xx.-----:x..::..:...-.....::::.:...x.xx:..x..:...:...:.:x....:..::::..:...:.:..... 109M1D88M7D50M5D12M1I61M 219/320 68.4% 321/94230402 0.0% 14/320 4.4% 102643198 87571357 +26720 chr4 + 190214555 129362878 129362877 129364189 1312 CTAGATGGCAGCAGCACTCTTTCATTCTAAGA----CTTCTTTTCTTTTCTTTTTTTTTAAATCTCACTCTCCTGGATAGTTGTTCTCAGCTCTGCTGTGCGATGATTTAAACAACGCTTTGATGCTGTAGGATGTTGGTGTTCACAAATAAGGTCTATCCTTTTCTTTTTTCTGAAAAGATAATATACTGCTTTTTCAAAGTCAATTAACACTTAGGGCAAAGGAAATGGGGAAAGCAAAAGGTCACTTTCTAAAGGGTTGCCTTGAAACC--TTTTGGTAAAATTCAGGTGTCATCCAGGAATTGCAAATCACTGGGAAAAGAAAAGAAATAATAATTAGTTCATTT-GTTTCTTGATAACTCCCAATAAGATGGCTTAATACGACTTTTCTGCTTTATTTCCTAGTAATGCCCATGGGGTGCTCAGAGTGCCGGCTGGTAATTTTTATGT-------CTT--------------------------GAAGTCATGAGGGCAATTGGGATGCTTTTGGGCCAATTTATGCATCAGGACAGGGGTGATGGAGAGAATGGC--TAAGATCTCTGGACTGCACTGTGGTTGAATACGCTTTACAAAAGA--------------GAATTGTCCAGAGAGTGGCATGAGACAGGGAGGAGTGAGTAACTTCCTCAGAA-AGGTGATAGACCGA----------------AGGACAAAA---------ACGATAAGACTT-TCTTCTACAAACAATCAGCCTCCATTCCAACCTCCAAACAATGCTAA-----------------GTGAACCTAAGCTTCAG------------GGTCAGTAAAA--TAAGGATGCATAAGTTTGGAGCTA-------CTTCATGTTTTGACCTCAGAT---GCACTTTGAAAATTTAGATAGTTCACCAGATGA------ATGTCTCAGAACATAACAGCTCAAGGTTTTAAT--AACTCACTTGAATTTCATTTAGAAAACAT---GCCTGGACACCCAGGAAACAATAAGCAGA-TATTAAAAAGTAACCAAATG-----------CATTGCAAATGAAGTTATTAACAAACTGACTTTTAAATTTACTGCTG------CTGGCAGGGTGCCCGTCTGGACAGGTCGAGTCAGGGCTGTGCAC-------------GGCTCACGCCTCTTGCAGCATGCCTCAC-CGTTGAGATCGCAGTCACAGTTCTTTCCTATCTTTTTATATCTATTTTAATATAAAAAGGCCTTCACTCGGTTTAATAACCTTTTCCTTCTTGAATAAGGAGTTTCTGTTTGCAATCACATGAATAG--AAAAAGACCTGCTCCAGAAACTCTGGGAGATTATTGCATGCCTAGCTGCAAAAATAAGGTTTTGAAAGAGCAGAAGGGATGGAATAACTAAATAATGAGCAAATTCTTGGGAGGTAAATTATTATTCGGGATTTTTGAACTGGTCTTT chr4 + 94230402 26718262 26718261 26719665 26718262 26718261 26719665 1404 CTAGATGGCAGTGAAGTTCTTTCAGTGACAGAGCTGCTTCCTTCCCCCACCCTCTTTCCAT------TTGTTCTGGAGACTCATTTTCATCCATACCGCGCTATGATTTAA-CAAGGCTTTGATGCTGTAAGATGTTGGCGGGCACAAATCAGACTTTT--TTTTTTTCTTCCTAAAAGGATAATATACTGCTTTTTCAAAGTCAATTAACACTTAGGGCAAATGAAATGGGGCGAGCTAAAGGTCAGTTACTAAAGGATGGCCACAAAAACATTTCTGGT-TTATACAGCGCTCATCCAGGGATTGCAGATCAGTGGGAAAATAAAGGAAATAGTAATTAGCTCGTTTCATTTCTTGATGGTTACCAATAAGTTGCTTTAATACAGTTTATCTGTTTTGTTTTCAATCA-----------------AGTGTGACTGGTGCTAATATTCATTTTGACCAGCTTCAGTCCACGCTCTTTCAAGACACTGCGCAGTCATTGCAGTCACTGGGAAACTGTTGTGGCAATTTATGCACCAGGA------------AGATATTAGCATTAAAATTTTAGGTCGGGAATGCTCTT-AATGAGCTTTATGTAAAAGGCATATTGTAGTTGGGCTGTCCAGCCATTA--AACAAACAAGGAGATGAGAGAGA----CTAAGAAGAAGTGCCATACTTACTGTCATTCATCATCCAGGTTAAAACAAGCAGGTAAGCTGATGCTTGGCCTTTGGAGAAATGTGGTGTTGATTCACTGGCTTACCCACTGCTGACTTTTTATGTCATGACTGTGGTGCTGTTCTGCAGGTGACCTGGTACGGTTATAAAGATTTAATCATACACAGCTCCAGAGCCACCATGGCCTTGGTGTT----CCTCATGTCAGTCACTGACATCAGTGAAGCAATGCACCGAAGTACAAGCGATATCTGAATTCTTTTGAGATGTGTGCCTTGTTTGGAATCAGTAGATTCATGTCAAGAGAGCATAAAGCTTGA------AGGTAGCTTTAATAAAACTAATAGAAAG--ACAAAATTCAAGGACCTTCCATAACAAAATGGGATAGCAGATTACTGTCTTGTAAGTTTAATGGTGACTATACGTGAAAATGGCCAGACTTGAC---TTGAATCTGTGCTTTCCACTTTCCTTTTGTAAGTCGAACAGCTTTCCAGGCAAGACTCACACTTTAAGATTGCAGTCACAGTTCATTTCTATCTTTTT---------------TAAAAATAAATCTGCTGAGTTTAATAACCTTTTCCTTTTTGAATAAGGAGTTTCTGTTTGTAGTCACATGAAAAGAAAAAAAGGGCAGTGCTACAGGCAGCAGGAGATTATTTCATGCCTACCTACTCAAAAAGGGTTTTACAAGAGCACAAGGGCCAGGGAAAGCACATAATGAGCAAACTCTTGTGAGGTAAATTATTATTTGGAA-TTTTGAATGGGTCCTT ...........:::x::.......x.xxx...----....:..:.:::x.::.:...::.x------:.x.:.....x.x.::..:...x.:x.:.:.:..x.........-...x..............:........:.xx.......x..:::.x.--....:..:..:..:...:............................................x.........x:...x........x..x.......:.x...x::...x.--..:....-xx..x...xxx.........:......:....x........x...:......:.......:..:...-:.........:::.x........x..x:.......:::..x....:...:...:.x.x:.-----------------..x...x.x.x..x....x..:..x.-------...--------------------------.x......x:x:.:x.:.....x:..x...x.x...........:.....------------...x.x.:..--...:..:.:x..x.x.x.x..:xx..-...:x......::x..:.--------------.:::.......xx.x.:--.xx.:...:....:x.x...x:.----..x....-.:...x:.x..:x.----------------...x:....---------.x.x.:.x:...-x.:.:.:x.:.x.xx::.:x.:x....xxxxx:::.xx..x....:.-----------------...:xx..:xx..x...------------...:.xx..:.--...xx..:..:.:x.:::....:.-------...x:....----.....x:.---x....xxx.xx.x.x.:::.:.x....::.xx.------..:...x.:xx.x.xxx..x.xx:x.::..:x.--:.x...x.x..x.:x::.:x...:.:...---..:..:------...x.:.xx...xx.:.-..x..:....--..x....x-----------...x:....xx::.x..x:.:xxx....x...x...:....x..x..------.xx.x.::xx...x.x..x...---.:..:..x.x...x.x...-------------.x.xx..:x..:.:xx:...x.x.....-.x..:....:.............x..:..........---------------......x:xx.:::..x:...................:......................:.:.........x..--......:x.x.:x.:.x.::.xx::..........x........x..:.xx...x.:......:x.......x.....x::.::x..x:.x............:.....x................:..:.-.......:x....:.. 32M4I25M6D44M1D47M2D111M2I7M1D67M1I60M17D26M7I3M26I50M12D10M2I26M1D18M14I17M2D23M4D7M1I14M16I9M9I12M1I47M17I17M12I11M2I24M7I9M4D8M3I33M6I33M2I29M3I6M6D17M1I10M2D8M11I47M6I22M3D19M13I28M1I37M15D75M2I131M1D16M 850/1235 68.8% 1404/94230402 0.0% 246/1235 19.9% 102644616 87569939 +18815 chr4 + 190214555 129378395 129378394 129379286 892 CAGTCTCCTTCCTA-----AGCCTCTGAGAAGCA--TGTCATTACTCTTTCCACTTTGAAAAAGGAGTCTGTCAATCAAGAAAGC-TTATTTTACAGGTCCTGGAGGGGAGGAATAACACATTCAGTTTTACTCTCTCTTATTCTTGGTAACACTTCATCTCAAGTGCCCATTGAACAGCACACTCAATAACTTGGGCTGAATTATGATGAAAGCACTCTCCTGGGAATCCAAGGCATCTGTATCAACCAGCCGTTGCCATTAGTTTACAAGGATGCATAAAATCATGGGCCAACATAAGTAAATTATGGCCAACCCCCGTGTGGGAACCACAAAAAAGCCGACCCTAATGAAGGATTAGAGGAAATCCCTTTGTTCTCAGGTTCTCTCAG--------------------ATCTTATCACCTGTACTACCTTAAGAAGTCAGTGGGTTACACCTCATTTCTTCTTTTTATAATGACATATGTGACACTTCATCCTGGGATTCAGATCTTAATTTTTC----------AGTTCCTTTTTTCATGTCAT------------GATAAAAAATTCTGGAGAATATATAG--TGTCAGCTTCCTTTCAGATTCATCATTTCAATATTTTCATCTGCTACAACTGTTTAATTAGGAGAGGCTTCTTTTGGTAGGCTCCTTTTGTATAACTTTAATGAAACTGAAGAGCATGAAATGTGGTTTCCCTGCTTTTAAATGAGGCTACTTTTATAGAAATAAGATGAGAAATGGAGAAATTGTTGAAGTCACAGTGCATGAAATTAAGGGAGCCCAAACTGTATTGGCAATAGTGCTTTTTTTTTTCTTCTTAAGTTGATGTTTTTGAGGAGCAAGGTTGTGGTTGCTAACAAACAGGGTCGATATTGTTTTTTCTTTCTTTTTTTTTTTTTAAGTTCATAGACTTCTCACAG chr4 + 94230402 26722987 26722986 26723833 26722987 26722986 26723833 847 CATTCTGTTTCCCAGTGTCAGACTCAGAACAGTAGTTGCCATT-CATTTTGCTCCTGGAAAGAATACACT-----TTAAAAAAGCCTTAGTTTCTCACTCCTTCCCGAGAGGAGTAATAC-TACATTTTAACTTTCTCTTATTTTCAGCAAGGCTTCAGTTCAAATGCTAATTAAGCAGCACAT--ATTGATTGATGCTGAATT-TATCTCATGCATTTTCT---------GTGGTATGTATATTA--CATCC-----CAT------------ATGAAAAGAATTTTAAGTGAGAGTAAT--AATCAT----ATCTTCCTTGT--------CAAGAA----GACACATGTAGATTTTCTGAGGG------TGTGATATTATGTTCTTGCAGTGGTGAAGAAGTGATCAGTGGCCTTCTTTCTTGTAACACTTGACAAAATCTGTGAGATAACCATTTGTGTTACTCTTGA-------GTGTTTCAAACTTCATCGTGTGATTCTAAACCTGTTTTATTTTAAGGGAGGAGTTTGTTTCTTCTTTTTATTTGTGTACCATAGGGATGACGTGCAAGGGAATATAGAGCATATCAGAATGCTTTCAGATTAATCATTTCAATAATTCCTTCTGCTACAATGGTTTAATTAGAGGAGTATTCTTTTAGTAAGGGC-TTTTGTATATTTTTAATGAAATTGAAGAGCATGAAATGTGGTTTCCCTGATTTTAAATGAAGCCACTTTTAGAGAAATAAAATGAGAAATGAAGAAATTGTTGAAGTCACAGTGCATGAAATTAAGAGAACCCTGACTATATTGGCAACAATTTTTTCTTTAGTATTTTGATGACCATAGAGCTAAATAGCTGTGGGCTAATTGCTAAGAGA---------------------------TTTTCTTGTTTTGGTTCATGGGCCTTTGACAG ..x...x:....:.-----..x...x..:x..:.--..:....-.x:...x.x.:.x....:.:x.xx..-----.:..:.....-...x...x:x:x....xxxx.:.....:...:..-.x..x...x...:.........:.::.:..x:.....x:....:...:x...:.:.......:--.x.:.:.x:x........-.:x:xx.x...:.:..:---------:x..:..x.:...:.--..x..-----...------------...x.x.:...:x.::.:x.:x:...x--...:..----.x.::..x...--------...:..----...x.xx:.::.xxx.:x....:------.x..x.x.:.x.....:x...--------------------::...x.:x.:....x:..:.x.x:..:..x...:.x..xx.x.:xx.x:.x..:..x.-------:.:.x.x.x........x..x.....x:.x.:.:x...x.:----------....:x...:...x.x.:..------------.:x.x:.x:.x.x:.:.......x..--.:....xx.x..........x............x..:.x..........:x..........::...xx.......:...:.xx.-.........x:..........:...........................x..........:..:.......x........:..........:..................................:..:...x:...:.........:.:.x:...:...xx.x..:.x.x.x:x..:xxx:.:.:x...x:x.xxx.::.......x.:.---------------------------....:..x...x:......:.:.:.:.x.... 14M5I15M2I7M1D26M5D10M1I34M1D63M2D18M1D17M9D15M2D5M5D3M12D27M2D6M4D11M8D6M4D23M6D21M20I59M7D41M10I20M12I26M2I84M1D212M27D32M 549/795 69.1% 847/94230402 0.0% 149/795 18.7% 102655408 87559147 +3058 chr4 + 190214555 129390523 129390522 129390585 63 TTAGTATCTAGAGGACTTTTTGGAGAAGAAAGAGGGCTTTTTAAAGATAAGAGGAAACTGGCA chr4 + 94230402 81107386 81107385 81107448 81107386 81107385 81107448 63 TTATTATCTATAGGACTTTTTGAATAAAAAAGTAGAATTTTGAAAGAAAAAAAAAATTTGACA ...x......x...........:.x..:....x:.:x....x.....x..:.::..x:..:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 48283137 NA +17331 chr4 + 190214555 129404534 129404533 129404916 383 TGTGCCGTGACTGAATAGCAAAGAACTCACCCTTGTCAAAAAAATTGAGCTTTTTTTCTAGCTGT-----GAAATTAACTATCAATTCATATGCAATCTCAGATCAAAAATGGTGGTGCACCAGATGCACTGGTGCATGAGAATGGAAGTAATTGTTTGTGGTTTTCATGAGAAGATTGCCAGTTTGCAGCATTTAAATTATACACAAACTGC-TTTTTACATCTCTAATTGTAGCTCTGTTGTTTTCAGGGAGGGTTGAATTGACATTGACAAACATAGACTTAGAAAAAATACAAAGACATGAAAACAGCACTAAATTTGCCCCAAAAATGATTCACTGAATAATGCCACAGTGTTCTATTTATTCCTTGATACGCCAAAATTTCCT chr4 + 94230402 26725290 26725289 26725661 26725290 26725289 26725661 372 TGTGCAGAGACTAAATGGCAAATCACTAACCCCTATCAAAAACGCTG---TTTTTTTCTGTTTTTTTTCTGAAATTAACGATCAGTTCATGT--------AACTGAGAAATGATGGGGAATCAGAAGTACTGGTGCATGAGAATGGAAATAATTGTTTGTGGTTTTCATGAGAAGATTGCCAGTTTGCAGGATTTGGACTGCATGCAAACTGTATTTTTCCATCTCTAATTGAAGATGTGTTGTCTGCAGGGAGAGTTGAGTTGACATTGACAA------ACTTGAGTGGAATACAAAGCCATGAAAATGGGCTCAAGTTGGTCTTGAAAGTGATTAACTGGCTCATACAGTGATATTTCAATTATTCCTAGGAATTCCACAGGTTGCT .....x.x....:...:.....xx...x....:.:.......x::..---.........:x:.x.-----.........x....:.....:.--------.:x.x.:.....:...x.x.:....x.:....................:.........................................x....::.:.::.::.......:-.....x............x..x.x......:.x.......:.....:.............------....:::x::.........x........::.xx::..:..x.:.:::...:.....x....:x.x..:.x::::.:..::.x........x.:x.:x...x.:x..x.. 47M3D15M5I22M8D113M1I60M6D109M 276/366 75.4% 372/94230402 0.0% 23/366 6.3% 102679244 87535311 +19644 chr4 + 190214555 129428421 129428420 129428930 510 AATTCAGTAAGCTAAAAATGTACCTTATATT-TCTTTTGTAAATGGTATATTATTCCATCAACTCCATTTTCATACAT-TCACATAGAACAGGAGTATTTAAGTGAAAGAATATTTCAGA-----------------------------------AAAAAG-------GAGGACAGGATAGTAATTACAACCCAACTTGTCTTGTGCTGACAGCAGCCAACTCATTTATTAAGTCAATGTAGTCAAGTAACACGGCAACATCACATTTGATTGAAATCTTGGCCAAGTCTGACAGATGTTCTCTACTCATTGTCAATCTCAAGTATGTTTTAATGAGTTTCAAGTGGCTGGAGCTCCCCTCTGCAGGTGCCACTGTTGCAGAGATTGTGAACAGATTCTTCAGGGCAATGGGTTTTGTATTTAATAAGC-----AGTGCATGGTAGGTAACTGGTAGAAATCATTGCTGAAAATGCAATCGCATCTCTGGAAACAGACACTCCCAGTCTATAGCTGATGAGCCTCTTTCAAATCAGTTAAATTCATAATAGTGTCCCAA chr4 + 94230402 26729095 26729094 26729644 26729095 26729094 26729644 550 AATACAGCAAATTATAAAGCTAGTCTATATCATCTTACCT---TAGCTTATAGATTCAGCAAATTAGTTTCAATGCATGTCACGTGCACAGTGAACCTTTAAGTGAAAGTAAATTTTAGATTcagaacaaaacaaaacaaaacaaaacaaCCCCAAAAAAGCCCCCCAAGAAACAGGCTAGTAATTAGAACCCAACTTTCCTTGCATTGACAGCAGTTGAGTCATTTATTAAGTCAATGTACCACAGTAACAGAGCAACATCACACTTGATTGAAATCTTGGCCAAGTCTGACAGATGTTTTCAACTCATTGTCAATCTCAAATATGTTTTAATGAGTTTCAAGTGGCTGGAGCTACCCTCTGCAGATGCCACTGTTACTGAGACTGTGAAAAGAATCTTTAGGGCAATGA---CAGCATGAAAAATTCCTTTGAGTAAATGGTATATCA---GAAGAAATCCTGACTAGCAACACAAGTGCAGTTCCTGAGAATGATCTTTACATTTTGAATCTGATGATTCGGTGCAAAATCATTTGAGTTTAGGTGAATATCCCAA ...x...:..::..x...xx..x::.....:-....x:x.---.:.:x...x:x.:..x...x.:x:...:x..:...-....:.:x.xx:x..::x............x.x....:...-----------------------------------......-------::::.....x.........x..........x:....:::.........:::.x....................x:xx.......x:...........:..................................:..x..................:................................x..........:..........:.x....:......x...x....:.........:---:x.:..xx..x.xx.-----...:x......x:.x.---.x.......x.x:..::x..::...x:...x:..:x..:.xx..:x:.:x..x.:.:x.x.......x:.xx.x:x......x..:.:..:.x:xx.:.:...... 31M1I8M3D35M1I41M35I6M7I243M3D15M5I16M3D106M 367/501 73.3% 550/94230402 0.0% 58/501 11.6% 102699326 87515229 +12088 chr4 + 190214555 129430754 129430753 129431142 389 TATTTTTGCTG----AAACTCTACCATGGATTTTAACCTGAAAGAAAAAATAAACATGTAGGCATTTGTTTAAGAAGAATCGGGAACCTCTCTGATATGCTATGTGAGCTGAGAAACACCGGCGTGGTGGGTTATTGTATGCCACCAGCTGTAGCCACTTTAGCTGGAGAGCACTTTGTATTCTTC---TTTAAGGCAGTAATTGGTAAGTATATTT-CTGCCTGTAATCAATAGCTTTTACATTCAACGTAATATTTCTAAACAAAAAGAAATATTACATTCAATGTAAAAGCTATTGATTGCAGAGAGCAAATGTCTTTTCCACATGCCACTCCACATGGCTGAATAATCCTGAAATTCTATAGAGCTACCAATGTGACAGACGCCTCTGTCATT chr4 + 94230402 26731356 26731355 26731723 26731356 26731355 26731723 368 TGTTTTCACTGGAATAAATCATACTTCGGGTTTCAACTTGTGAGGAAAA--------TCAGGCGTTTGCTTGAGAAGGCTCTGGTGACTCTCAAACATG-----TATGCTGATTAGTACTGGTGTA---------------TCACCAGCTGGAACTACTTAAGCTGGAGGGCACTTTAGATTCTTCCCCTCTCCATCTGTAATTGGCAAGTGTATTTTCTGGCTACAATCAATTGCTTCTACATTCTGAGTAATATCTCTAAGTAAGAACAAATATTACAGCAGCTACAGAAGCTATTGATTGTAGC-AGAAAATGCCCTTTCTAAATGCCACTCGAGATGACTGATGTGTGAAGAAAATCTGTGACATCATTAACATGGCCAATAAACCTGTCACT .:....::...----...::x...:x:..:...:...:..x:..:....--------x:....:....:..:.....:x..x..x:x.....x:.:...-----.:x.....xx.::..:..:..:---------------:.........x.:.:....x........:.......:x.......---.:.xx:x.x........:....:.....-...x..::.......x....:.......x:x.......:.....::..:..x..........x:x:x.::.:.............:..x-..x.....:.:....:.x.........x.x...:....xxx:.xxx....x...:.::x:::.::..::..:.x:.::xx:......:. 11M4I34M8D42M5D22M15D45M3I28M1I89M1D89M 247/360 68.6% 368/94230402 0.0% 37/360 10.3% 102699398 87515157 +22200 chr4 + 190214555 129437779 129437778 129438629 851 TAAATAAGTTCACATGCTATGGACCGATGCATGGTGTTTCTTATACAATGACCCTCGTCTAAAGAGAGGGATCTGCTTTGCAACTGAATATATGTAGTCAACTTAAATATGCTGATGTTAGAAATGAGAATTAGTGGT-TTTTACAACTACAGTTGAGAGAACATTTCGTCTAAAATGCTGAAAA-CTCTGGTTTAATATATGAAAATAAAGCAGCC-AAGACATTTTTCATATG----------TTCTAGATTTCATCCTGCAGCCTTTCATAGAAAGGTGAGATGACAGATAGCAGATGGATTTACCTTTTTAGTTAGCTGCAAAACTACAAATCAATTTCATATAAACAGATCTCTCAGCCAAATATAGCTTGACAGTAATTCTATAAGATTCATCAAGTCAAGGAAAGAGATTATGTCTGATGACATGAACTAATGTAAAAGTAAGATATATC--ACGATTTCAATATACTAGGTGAGAGAATCCATTCAATATCACTTTTTAAATGAAAATGCTTTCCTCTGTACTGATGATTTCAGTATTCATTTACTTTTTAGAATGATAAGTAA---TTA-TTATACCTTTCACATTGTTACCCAGAATAATGTGAAAAAAATTACTAAAACAGTTTTCAGGTTGCAAGTGATATAGAGTATGTAAAATTATTTAGAAACATCCAGGTCAGTGTAAGGCTTTAAAAATATT------GTTATTTCACTTATTAGACTAA---GTGTATATTGGA-ACTGCAGTTAAGTAATTACATTTAAGTAATTACTTTACTCATAAGAGA-AGAAACAAGATGTGATGTGCATAAAGCACTTAATCACTTGTAGTTTAAAGCCTATTTTA---TTTCTCTGTAATATTTGGAG chr4 + 94230402 26735811 26735810 26736672 26735811 26735810 26736672 862 TAAGGAACTCAGTAAGGTAAGAACCTGCTCATGACATTTCTCACACCACAACCTTTGTGTGAAG-TAGAAGTTTGATG---AGATTAGAATATGTGACCATCTTGCATGTGTAGAGATTAAAGGTAAGAATTAATGATGCTTCATAACTTCAGTGGAGAGAAGCTTCAGTGTGCTGTACTGAAGAGCCTTCATTTGATAGCTGAAAATGGAACAGCTGAAGAAAGATCTTAAAAAAAAAAAAAAACTACAGGCTTTATCTTGCTGGCTTTCATGAAAAGGTGACATGAAAGACAGCAGATGGATTTATCTTTTCACTTAGAAGCAAAACTATGAATGAGCTTCACATAAACTGATCTCTCAGCCAAATATAGCTTGACAGTAATTCTATAGGATTCATCAAGTCAAGGGAAATGATTGTG--TGATGCCATGAAATAATGTGAAAGTAGGATATCTCATATGATTTCAGTATTTCAAACCTGAG--TTCATTAAATACAACTTTTT-GATGAAAATGCTATCCTGCATTGCAACAATTCTGGTCTTCCTGTATTCTTTAGAATGATGAACAGGTCTTATTTATAACTTTCAAATTCTAATTTCCAGTAATCTT--AAGTGTTACTGAAACAATTCCTAGACTGCAGATAGTACTGTGGCTTT-TGACTATTGTGAAAT-----GGTGAAAGTGAGTTTTTTAAGATTTTAAAGCAGTTTTCCTGAATATCAGTCTAACAGGTATGTTTTAAATATCTTACTCAGGCTGT--CAATAGAATAGTGGCTTCAGCTACAAAAAACCCAAGCAAAACGT-ATAGTCAAAAAATGTATGATGAGATGAA--TTGAAGTCTGTCTTCCTTTTTTTTTGTAATTTCTAAAG ...:x..x.:x::.x.x..x.:...x::x....:::.....:.:..x.::...:.:..x.:...-x..:::.:..x.x---.:x.x.:x......:::..x...:x..:..:x..x:...:.::.:.......:..:.-:..:.:....x....x.......xx..:x..x.:xx:.:.....:.-.::.x:...:...xx.......::.:....:-....x.xx.:.:.x.x:----------:.x:..::..:...:...x.x.......::........x....x...:..............:.....:.x....xx.........::...x.::....:......x......................................:.................:..:x....:..--.....x......x......:......:.....x..--.:.......:...x::.:::xx...--.:....x....:x.......-:...........x....x::.xx::.::...:::..x...x.x..:.:...........:.::.:---...-.....x......x...x.x.:::xx.:....x.x--..:x:.....:.....:..:::..::....::.::..:x.x.xx.x.-x:.:....xx....:-----...x.:x..:..x:...x..:..x..------...x.::::xx...:..x....---..:.:.x..::.-.::x:.x.:.:.:x:.--..x.x:.:..:.x:...:.x::.:..:.:.-xx..:...:.:..-..:xx..x...::::x.:..x.xx..x.--..:...:..:.:..x---...:.:......x.:.::.. 64M1D13M3D57M1I46M1I31M1I17M10I175M2D35M2I25M2D20M1D65M3I3M1I34M2D47M1D15M5D26M6I22M3I12M1I16M2D30M1I13M1D28M2D15M3I20M 550/829 66.3% 862/94230402 0.0% 55/829 6.6% 102701968 87512587 +3204 chr4 + 190214555 129479138 129479137 129479290 153 CCTTTTTATTGTCTTTA-----GAGTTTTCCTTATTTAAGGAAAGCTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCT chr4 + 94230402 63697081 63697080 63697239 63697081 63697080 63697239 159 CTTTCTTATTATATTTAAATGTGAGTACTCCACA--------GACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..:.....:.x....-----....x:...x:.--------:.x:..x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:..:.x:xx.:::.:...:..:.::......:...:....:.x.:. 17M5I12M8D20M5I42M4I54M 91/145 62.8% 159/94230402 0.0% 22/145 15.2% 65782057 NA +3413 chr4 + 190214555 129479178 129479177 129479286 109 CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCT chr4 + 94230402 63697127 63697126 63697239 63697127 63697126 63697239 113 CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:....x:xx.:::.::..::.:..:...............:.x.:. 55M4I54M 68/109 62.4% 113/94230402 0.0% 4/109 3.7% 65782051 NA +3448 chr4 + 190214555 129479179 129479178 129479274 96 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.:...:..:..:..:............:.x.:. 59M4I37M 63/96 65.6% 100/94230402 0.0% 4/96 4.2% 65782039 NA +3170 chr4 + 190214555 129479182 129479181 129479327 146 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTT chr4 + 94230402 67728277 67728276 67728422 67728277 67728276 67728422 146 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCT .....x:..x....:....xx:.::..:x.......x.x...x:x::::..:...:.::.:.x.x:.....::x:x.....:...x:.:x...x::x:.x:.:..x::x..:..:.:x...:::x.:::xx.......:.:x..:. 146M 79/146 54.1% 146/94230402 0.0% 0/146 0.0% 61750905 NA +3167 chr4 + 190214555 129479183 129479182 129479274 92 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCT chr4 + 94230402 63697140 63697139 63697235 63697140 63697139 63697235 96 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....----.:.:.::..:..:..:......:...:....:. 59M4I33M 59/92 64.1% 96/94230402 0.0% 4/92 4.3% 65782043 NA +3044 chr4 + 190214555 129479206 129479205 129479327 122 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTT chr4 + 94230402 75287123 75287122 75287244 75287123 75287122 75287244 122 TTTTCTTCCCTTTCCTTTGCTCTCAGTCCTCTCATTTTAATGTGCTTATTCTATTTTGCCTTTTTCGTCTCCTTACTTCACCTCACTGTATTTTCATTTTTCTTTAATTCCTCCTTTTTCCT ...::...::.:.:::..x..:..xx..:.:::x.:..xx.x:x:.:x...:x..:.x.....:.:x::.....x...:x:...x..x.x.:.::x.:.:.....xx...:.:.......:. 122M 69/122 56.6% 122/94230402 0.0% 0/122 0.0% 54192083 NA +3128 chr4 + 190214555 129479206 129479205 129479327 122 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTT chr4 + 94230402 67728277 67728276 67728398 67728277 67728276 67728398 122 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTT .....x:..x....:....xx:.::..:x.......x.x...x:x:.::.::...:.:..:.x.x::....::x.x......:..x:.:x...x.:x..x::::.x:.x.....:::x.... 122M 70/122 57.4% 122/94230402 0.0% 0/122 0.0% 61750929 NA +3162 chr4 + 190214555 129479216 129479215 129479299 84 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.......::..x.::..x..:.:...::::.:..xx:.x..x.:..:......:...:....x.....x:.xx..x.:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 72107189 NA +3053 chr4 + 190214555 129479237 129479236 129479299 63 CTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTC chr4 + 94230402 13214821 13214820 13214883 13214821 13214820 13214883 63 CTTCTTATGTTCCTTAGTTCATTGCTTGCCTTCTTCCCTCCTTTCTGTCTCTCTCTCACATTC ...::.x.x......xx...x..x...x.:.....:.:........x..........x.x:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 116264416 73950139 +3024 chr4 + 190214555 129479298 129479297 129479343 46 TCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTT chr4 + 94230402 46398030 46398029 46398075 46398030 46398029 46398075 46 TCTCTCTCTCTTATTTTTTTCCTTTTTATTTCTTTATTTCCCTTTT ............x:...:..:......x.......x....::.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 83081268 NA +3134 chr4 + 190214555 129503255 129503254 129503323 69 TGTATGTGTGTGTGTGTGTGTATATATATATATATACACACACACACACA----CACACATATATATACACAT chr4 + 94230402 85834543 85834542 85834615 85834543 85834542 85834615 73 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x...................xx..:..x::.....:.:::.x.:...----:.::..:.:...:...... 50M4I19M 50/69 72.5% 73/94230402 0.0% 4/69 5.8% 43668712 NA +3032 chr4 + 190214555 129503265 129503264 129503324 60 TGTGTGTGTGTATATATATATATATACACACACACACACACACACATATATATACACATA chr4 + 94230402 61270776 61270775 61270835 61270776 61270775 61270835 60 TGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..x:.:.:.x.:.......:.......:...::.....x....x...:....x::...:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 68232489 NA +3136 chr4 + 190214555 129503271 129503270 129503311 41 TGTGTATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ...::.......................x.x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 125094189 65120366 +3005 chr4 + 190214555 129503273 129503272 129503313 41 TGTATATATATATATATACACACACACACACACACACATAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ....:.............:.........x.x.......:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 125094191 65120364 +3138 chr4 + 190214555 129503273 129503272 129503380 108 TGTATATATATATATATACACACACACACACACACACATATATATACACATATGAATACTACTCAGCCATAAAAAATAATGAAATCATATATTTTTCAGCAATATAGA chr4 + 94230402 74671076 74671075 74671177 74671076 74671075 74671177 102 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAA-----AAAAATTAAAAATGCAGAAGAAGGAAT-AAGTTAAATAAGTTACAACAAAGCAGA ................................x.x.x.x...xx..x.-----:..x.:..xxx.xx..x..:..:x...-..:.:.x...xx..x..:...x::... 48M5D27M1D27M 73/102 71.6% 102/94230402 0.0% 6/102 5.9% 54832197 NA +3078 chr4 + 190214555 129520458 129520457 129520516 59 TGAAGAAGAGGAAGAAGAAGGAGGAGAAGGAGGAAGAAGAGAAGGAGGAGGGAGGGGGG chr4 + 94230402 69179387 69179386 69179445 69179387 69179386 69179445 59 TGAAGAAAAGGGAAGAAAAAAAGGATGGTGGGGAAGGAGAGGAGGTGGAGGTAGGGTGG .......:...:.::.:..::....x::x.:.....:....:...x.....x....x.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 60341071 NA +29191 chr4 + 190214555 129522039 129522038 129522719 681 AAAATCCTTTAAATTTCAGATTGTGAATCTTATTTGAAATCATCTGGGCTTCGCTTAATTTTCAACATTTTGGAGTTGCAACGTGTTTCCAATATAATTAAAAAGTAAGTTTGTTCTGTGTTCTCTCTCCCCCTCTCATTTTCACCGAGGACATGAATTCTTAA-AAAATTTGCATAGTAACATTTACTTTCTTTTCTGCTCCATGAAGGAATATAATTAAAAAGGTGAAAGGCATTA-AGCTGATGGTTCATAATGCACTAATTTATAATAGTGTATTAGCATTCTGATGAAAATAAAATACTTAATGAAACTGGAGAAAG----------ATTTCATTTTC-ACCCTTCTCATTATATGTATGGTGAGTTCTGAGATTCAGGCAATGTTGCAGCAGAGAGGCTATCATAAGTGAATGCTGCTTAGG--AAGCTATTCAACAAGAGTTTTCAAACAGCTGTTCCCAAGCTTCATTAAGACTCATTATGAGTTGTCATGTAATGGAGAACTTATATTTTTTGATGATCTCTGCATACCAGTAAAGATAAAAGTATGTCTTAAGGCAGAACTGAAAAGAACAGAAGTTGGTACATATTAAAAATAGATTACTAAAATGCCCTAGTTAGCTGGCACAGACCTTAAAAGCTCAGTACAATCATTCAGATTTAAAGGGAAA-GATAAAAAGTGACTAAACT chr4 + 94230402 26756806 26756805 26757470 26756806 26756805 26757470 665 AAAATACATAGTCTTTCAGTTTAGGTAAC--ATGTAAAATTATGAGAGCTTATTGTAATTTCTAATAATTTGCAGCT--CATCTATCTGTAGTATAATTAAAAATGGAATTTGAACTCTGTTTCTTATGCTCTTC---------CTAAAGACATGAATTTGGAGCAAAATTTGCATAATAACATTTGCTTTTGTTGATGTTCCAAGCAGGAATATAATTAAAAAGGTGAAAGGCTTAAGAGATGATGGTTCATAATGTACT--------------TATTAAAACTCTGATTAAAATAAAATGTCTAAGGAAAAAGGATTAAGCTTCTTTTGTGTTTCATTTTTGATTTTTCTCATTATATGTATGGTGAG--CTGATAACTCAGTAGTACTATAAGAGAAAAAGCATCCTAAGCTACTGCTGGTTGGGCAAACCTATTCAACTGGAGTTTTTAA-CAGCTGCTCCCAAGCTTCATTAAGGCTCATTATGAGTTGTCATGTAGTAGAGAACTTATATTTTCAGATGATCTGTGCACAGCAGTGAAGATAAAAGTCTATCTTAAGGCTGTACTAAAAAGAACAGAAGATGGTACATATTAAAAATAGATTACTGAAATTCCCTAATTAGCCAGTGTAGACCTTAAAAGCAAAGCACAATCAG--AGCTTTAAGGGGAGATGGCAAAAAATGACTCATCT .....x.x.x:xx......x..:x.x.x.--..x.:....:..xx.:....xx:x......::..:.x....x..:.--x.:x.:.:.x:.:............xx:.:....xx..x....:::.x.x.:.:..---------.::.:..........:xx.:-............:........:....:x..xx..:....x.x...........................x.x.-..x...............:...--------------.....:x.:......x..........:::...x....xx...xx...----------:.........:-.:::......................--....x.x::x:.:.:.::.::.:x...:.::x:...x....:x.x.....x..:..--..x.........x:.......:..-......:.................:.....................:.:...............:x........x....:.x....:...........x.:.........x.x...:.............x.........................:....x.....:.....::.:::.............xx..:.......x--..x.....:....:.-.::.....:.....x.x.. 29M2D46M2D56M9D20M1I73M1I22M14D47M10I11M1I26M2D56M2I24M1D205M2D15M1I19M 498/649 76.7% 665/94230402 0.0% 48/649 7.4% 102765233 87449322 +11485 chr4 + 190214555 129524599 129524598 129524931 333 TTTGTTCTT----GAAATATGCTCTGA-----------TTGTTTCTAAAACCTTTTTTCCAAGGTAATGAATTAGTTTTGTCAGTTCAAACATTGCAAACCAGATTATTGAATGACTTCATATTTGATAGTGTTTACATCAATATATTGATATTATTAGTAGGTTTGTTAACAGTTTGGAGACAAAAGAAGAA---ATTAGCACTGAT-----TGCCTATGTAATATACTAAAAGG-----------TTATCCAGGTAGAATATGAGCTTCC----------TTCTAATTGC-TATTAAGGCTGCTCATAGATTAAT-TGAAGTGGCAAATGGCAATATTATTGTTTAGGGTGACT------------TACCTAATCCCAGTGCAGCAAAT chr4 + 94230402 26759515 26759514 26759902 26759515 26759514 26759902 388 TTTGTTCTTCTCGGAAATGTGTTCAGACAGCAATTGCTTCATTTATAAAGAATCTTCTCCA-GGCAGTTAATTAGCTTTGTCAGT-CAGCTGTCGTAAACCAGATTATTGAACTGTTTCATATTTGAAATTCTTTAAACTAACATCTTGACATTGCCAGTAGGTGTGTTAATAATCTGAAGACATGAGAAGAATTTATTAGCTTTGGTGTGCCTGTCTGTGTTATGTAGTAGAGAGTTAACTTCATATTATCCAAACACAGCGTGAGCTTTCTCATGAAAGGTTCTAATTGCATTTTGAAAATGCTATTAGTTTACTCTGAAGTGGCAAATAGCAATATTGTTGTGT-GGGAGGCTCTGTGTACATAATAACAAATCCTAATGGAGCAAAT .........----.....:..:..x..-----------.::...x....:xx.:..:....-..:.:.x......:.........-..:x::.:.:................:x::...........x.x.x....x.::..:..x....:...:::.......x......:.:.:..:.....x:.......---......x:..:.-----..:..:...x..:..x..:.::.-----------.......:::.x.:::.......:.----------..........-.x..:.::x....xx...x...x.-.............:........:....x.-...x.:..------------..x.x.....:.:..x....... 9M4I14M11I23M1D23M1D107M3I12M5I23M11I25M10I10M1I24M1I29M1D8M12I23M 248/330 75.2% 388/94230402 0.0% 61/330 18.5% 102765084 87449471 +3124 chr4 + 190214555 129535158 129535157 129535215 58 TTATTTGCATATATATGTGTGTGTGTGTGTATGTATTTATGGACACAAATTACTTTTA chr4 + 94230402 10896926 10896925 10896983 10896926 10896925 10896983 58 TTTTTTACATATATATATGTGCGTGTGCGTGTATAGTTATGCTCACAAACTCTTTATA ..x...:.........:....:.....:..:.:..x.....xx......:.x:..x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 118638232 71576323 +3169 chr4 + 190214555 129544746 129544745 129544801 56 TAGCCTGGGCAACA---GAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGC chr4 + 94230402 88382697 88382696 88382755 88382697 88382696 88382755 59 TAAACTGAGCAGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGC ..:x...:...:..---.........xx.x.........::.:................ 14M3I42M 46/56 82.1% 59/94230402 0.0% 3/56 5.4% 41162049 NA +3180 chr4 + 190214555 129573620 129573619 129573678 59 GCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x..................::........x.xx.x...xx:.x......::.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 53540414 NA +3299 chr4 + 190214555 129574398 129574397 129574470 73 CTGAGTAGTATTCCATTATATATATATATGTATATATATATATATATATATGTATATATATATATATATATAT chr4 + 94230402 7572238 7572237 7572310 7572238 7572237 7572310 73 CTGATTAGTCTTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATAT ....x....x...x..x.:.....x.:....:...:.x.x.x:...x:..x:...:.....:....x...... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 122002160 68212395 +3222 chr4 + 190214555 129577266 129577265 129577349 84 TAGTTCTGCTCTGATCTTGGTTATTTCCTTTCTTCTGCTGGGTTTGGGTTTTTTTTTTTTTTTTTTTCTCCAGTTCCTTGACAT chr4 + 94230402 46302395 46302394 46302472 46302395 46302394 46302472 78 TAGTATTAAGCTGTTCTTTGTACTTTTGTTTTATT------GTTTGGGCTTTTTTTTTTTTTTTTTTCTGTAGCTGCCTGACAT ....x:.:xx...x....x..xx...:x...:x.:------.......:....................x:..:.x.:...... 35M6D43M 58/78 74.4% 78/94230402 0.0% 6/78 7.7% 83274871 NA +3142 chr4 + 190214555 129577267 129577266 129577346 80 AGTTCTGCTCTGATCTTGGTTATTTCCTTTCTTCTGCTGGGTTTGGGTTTTTTTTTTTTTTTTTTTCTCCAGTTCCTTGA chr4 + 94230402 3492538 3492537 3492617 3492538 3492537 3492617 80 AGTTCTGAGCAAATCTTTCCTATCCCCTTACTGAGAGTGGGCTTTTGTCTTTCTCTTTCTTTTTTCCTCCAGTTTCCAGA .......xx.x:.....xx:...::....x..xxx:x....:..xx..:...:.:...:......:........:.:x.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 126084729 64129826 +3191 chr4 + 190214555 129607481 129607480 129607577 97 TTTCAATTGTCCTTTTTTTCTTGCACTTCAAAGATCTTATACTCAAGATCAAAGCATTATATGATGGGTGTAAGGTGAAAGAAGGGCAAT-TGAGGAT chr4 + 94230402 22348586 22348585 22348683 22348586 22348585 22348683 98 TTTAAACTGTCTCGTTTTTCTTTCATTTTCAGTGTTTTATAGTCATTATCAAAGCAGTTTACAGTGAGTGGAGGGGAAGGAAACTACAGTCTAAGGat ...x..:....::x........x..:..:x.:x:.:.....x...xx.........x.x..:::..:...x.:..x:.:::..xx:..:.-.:..... 90M1I7M 63/97 64.9% 98/94230402 0.0% 1/97 1.0% 107258895 82955660 +3026 chr4 + 190214555 129619065 129619064 129619106 42 GGTTTTTGTTTTTGTTTTTTTATTTTTTTTAATTGACCTGTT chr4 + 94230402 50431181 50431180 50431222 50431181 50431180 50431222 42 GGTTTTGGTTGTTGTTTTTTTCTTTTTTTTAATTGGCTTGTT ......x...x..........x.............:.:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 79187884 NA +16581 chr4 + 190214555 129623321 129623320 129623701 381 AGCTGTCATGGCACTGGGTT----AACTGTGACATTTTGAAA-TAATTGTGGTTGTAGAGCTTCCTGTAGGCAGTTGCTGCTTGCTTTGTTAAATTGCCCACATTTTTCAGTCAAGCATTTTCCTGGCTGCATCAAATGTATTGAGTAACTGTGTTAACCTTGGTGTGTTTTGGCAATAGGAGATCAAGTAAACGTCAATAAATGTCTCCCACAGCCCTGATAAACT-CCAAGGGCACAGACAGAGGTGTTTATGAGCTGTAGGGGACAATTTGGTCAAGTATACGTTTCCCTTCAAGTTGCTTATTGCCATTTTAGTGTTAGCAGAACATATTTTAAGTCAAC--TTTTTTGACAGAACATATTGGTTGGCATTGCGTAGGCTTCTGT chr4 + 94230402 26781000 26780999 26781383 26781000 26780999 26781383 384 AGTTGTCATTG---TGGATTTACTAATTGTGATGCTGTGAAAGCAATTCT--TACCACTATTTCCTTAAGCTGTTTGATTCTTGCTTTGTTAAAATGCATGCATTTTCCATTCAAACATTGTCCTGGCTGCATCAGAGGTGCTGAGTAACTGCATTAACCTTGGTGAGCTTTGGCAATAGAGAGGAAAATAAAAGTCAATAAATGTCTTCCACAGCACTGATGAACTACAAAGAGTACCAAGAGTGGTGGTTATGAGCTGTGGGAGATAATTTAGTCAACTATATCTTTCTCTTCAAATTACCTACTGCCACGTTAGCATCACCTAAGTATATTTTAAATCAACTGTCTTTGAATGGTACACACTGTTTGGGTTGGCATGTGTTTTTGT ..:......x.---...:..----..:.....:::.x.....-:....x.--.xx:.xx::.....xx..x::x...x.x..............x...x::......:..x....:....x..............:.x..::..........::............x.:...........::::xx..:....x..............:.......x.....:....-.x...:.:..x:.x..x....x...........:..:..:.....:.....x....:x....:......:..:.:..:.....:x....::.:.x.x:.::.........:.....--.:...x:.::.x...:.:..x....xx.x..:.:x.:..:... 11M3D6M4I18M1I7M2D175M1I116M2I43M 276/376 73.4% 384/94230402 0.0% 13/376 3.5% 102842321 87372234 +13891 chr4 + 190214555 129636641 129636640 129636989 349 TGAGGTTTATCTT-TAGGGTTTATTAG---TTAGTCCTAGTTAAATCTTAATTGGGATTTTTTCCACACATTTAACAATATAGATTATTTACAGTCTCAAGAATACAAAG-AAAACCCATTATAGGTGGATCAGAATATCCACAGAAAGTTAACCTTCCTTTTAACAGTGGCAAGGGAGCAAAACAAACTAATGGTGATTAAGGTGTCAGGCTGTAATTGCATTTGCCTCCAAGTAAATCATCAAGTCCCAGTAAATAATTACAGCAAGCAGTCTTTCTCAGCATGGAAGAGTTAACGAGGTGTAATTAAAATTTTTCAGGAACTATTACTGGATTATTTTTTATTGTGGTAAA chr4 + 94230402 26782653 26782652 26783001 26782653 26782652 26783001 349 TGAAGTTCAGTTTATTGGTGTTATTAGCCATCAATCATAATAATATCTTAACCCCATTTTTTTGTGCaaatttaataatattaatattttaCAGTCTCTTGGAAGTGTTGCAAAACCAATTACAGAAATGTCAGAATTTCCATAGGAAGATAACCTTCCTCTTAACAGTATCAGGGGAAAAAAACAAACTGATAGTGATTAAAGTGTCAGGATATAATTGCATTTTCTTCCAAATAAACTATCAACTACCAATAAATAATTAAAACAAACCATGTTCCTAAGGATGCAACAGTTCAGCAGCTGTGATTAAAAAGTGCTAGGAGACATT-----ATTAGTTTTTTTAATGATAAA ...:...:.x:..-.x..xx.......---.:.:..x..:.x.x.......::xx:x......x::..x......:.....x:..xx...........xx.:.x:::xx.-......x....:..:x:x:.......x....:..:...x..........:........:x..:....:x..........:..:........:........x.:...........x.:.....:....::.....x.x...:..........x.:...:.x:.x..:..x..x...x..x....x.xx..x...:.......xx.x::....:x:...-----....x.....x.x:..:.... 13M1I13M3I80M1I217M5D21M 248/344 72.1% 349/94230402 0.0% 10/344 2.9% 102853988 87360567 +3403 chr4 + 190214555 129646980 129646979 129647058 79 GTGGCTCATGCTTGTAATCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x..:.--....:.:........x..::........x.xx.x...x.............:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 53613779 NA +3085 chr4 + 190214555 129668796 129668795 129668916 121 TTACAACATGAAAGAAAGGAAGGAAGAAAGAAAGTACAAAAGAAAGAGAATGAGAGAAATGGAGAGAAGAAAAAAGAAGAAAAAAGAAAGAGGGAAGAAAGGAAGGAAATGGTGACTAAAG chr4 + 94230402 64055794 64055793 64055914 64055794 64055793 64055914 121 TTAAGAAATGAAAAAGAAAGATGAAAAAGTTTTATTCAGAACAAACACAAAAATAGAGAATCACAGAGAAAAAAAAAAAAAAAAAGAATAATCTGTGAAGAGGAAGAAGTGGTAGTTATAG ...x:.x......:.:.:::.x...:..:xxxx:.x..:..x...x.x..x:.x...:.xxx.x...::......:..:.........x:.xxx:x...::.:.:...:....:::..x.. 121M 72/121 59.5% 121/94230402 0.0% 0/121 0.0% 65613002 NA +3138 chr4 + 190214555 129668865 129668864 129668915 51 AAAAAAGAAGAAAAAAGAAAGAGGGAAGAAAGGAAGGAAA-TGGTGACTAAA chr4 + 94230402 2216136 2216135 2216187 2216136 2216135 2216187 52 AAAAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAAATTGGTTGCTGAA ....:.:....:.:......:...:...............-....x:..:.. 40M1I11M 42/51 82.4% 52/94230402 0.0% 1/51 2.0% 127452729 62761826 +3960 chr4 + 190214555 129671348 129671347 129671487 140 GGAGAGAAAGAGAAGAAAAAAGAAAGAGGGAAAGAAGGGAAGGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAGGA chr4 + 94230402 65771202 65771201 65771340 65771202 65771201 65771340 139 GGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGG-AGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ...:.:........x....:...:.:.:.x.x.:..:xx.::.:.:::.....xx.::.x:::..x::.x.xx..:.......:..::..x..:x....-..x.x:.....x..x..x:...xx..x...:...:..x.. 99M1D40M 86/139 61.9% 139/94230402 0.0% 1/139 0.7% 63900146 NA +16640 chr4 + 190214555 129672434 129672433 129672872 439 TTAATTGTGTCATTATAGTTAACATTAGTAATAAACAATAATAGGAAATATTTGTCTGTTCAAGTGCTCTTATTGCCTTTAACCATTTTGAATTATTAAACCATTGAAATCAATACTGTTCACTTATTTTTAATAATGAGTTCAATGACATAAAAGTAAACAGTTTTAGAAAATGACTTTTTCTTTGAAGCCCAGCACATGTTGCTATGTATGCAGAGTGCAGACTGAACTTGCA--GCCGCTTTTGGCAGTTTTAAAATTATTGTTAATTAACTTTTCTGCTCAAATTCCT-GCAAGCTCAACTATAGTTGATGAGTTATCATGCTACAGCCAATAAATCCTGAAGTAATTTCATAAACATAGTTATTTAACCTAAATTGGATTCTCCATCAAACGAGACAAGTCAATTTTTTCAATGCCATCATAGTGTGAGTTTTAATA chr4 + 94230402 26790445 26790444 26790865 26790445 26790444 26790865 421 TTCATTAAATCAATGTGGTCAACATT-TTAATGCAAAGTAA-AAGAAATATTTGTATCTTCGGGGACTATTGTTGCCTTTAACCATTTTGGATGATTAAAATATGTAAGTTAGTATTGCTCAGTTCATTTTAAT---TCATTCAGTGGTCTGGAAGCAG--------------TGTCTTGTTATTT-ATTTTTAGTTCATGCTCATATGTATATAGAATACTTACTGAACTTATATAGTAGTTTTTGGCAGTTTGAATGTAATTGTTAATTAACTTCTCTACTTAAGTTCCTTACAAGCTAAGTTGTAGTTGATGAGAGGTAATGCTAAAAACAATAAATCCTCAGGCTATTTCATAAGCATAACCGTTTAACTTAAATTAGATTCTCCATCAATGGAGAAAAATCAA-TTATTAAATGCCATATTATTGTGAATTTCAATA ..x...:x:...x.:.:..:......-x....:x.x.:...-.:...........x.x...::.x:..x..:..................:..x......x:..xx..:.:.:..:..:...x..xx.......---xx:....:..::x.::...:.:--------------..x...x..x...-.xx:::..:x....:.xx.......::...:.:.xx.........::.--.:x.:............x..x:.x...............:...:..:..:.....-:......x.::.:...........xx:.x......x.:x...........x.:.:x.........:....::::......:......:.............xx....x..:....-..x..x........xx..x.....:...:.... 26M1D14M1D92M3D22M14D13M1D48M2I55M1I115M1D33M 305/418 73.0% 421/94230402 0.0% 24/418 5.7% 102881989 87332566 +3228 chr4 + 190214555 129673656 129673655 129673710 55 ATATACATACACACACATATATATACACACATATATACATATATATGGATAAAGA chr4 + 94230402 74526074 74526073 74526128 74526074 74526073 74526128 55 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGA ..x:...:..........:x.:.......x........:........x..xx... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 55147582 NA +3020 chr4 + 190214555 129685924 129685923 129685992 69 GCATCTGTAGTTTCAGCTACTAGGAAGGCTAAGGTGGGAGGATCACTCGAGCCTGGGAGGTCGAGGCTG chr4 + 94230402 76033206 76033205 76033274 76033206 76033205 76033274 69 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ...:x.......:........x.:......:..x:xx.x.:.x....:..:..::.:..x.:x:..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 53652718 NA +3135 chr4 + 190214555 129694991 129694990 129695091 101 ATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAATTAAAAAAAAAATAAAAAAAATAAAAAAAAAAAAAAAGAAATAAACATTCAAAAGGGAAAAC chr4 + 94230402 11407741 11407740 11407841 11407741 11407740 11407841 101 ATGCCTCATAAAGTTGAGAGAGCATAAAAAAATCAAAGAGTGAAAAACAAACAAACAAAACAAAACAAACAAAAAACAGCCCCAAACCCCAAAAGCAAAAC ...:x:.x....::.x.:..x::.xx......xx...:.x.:.....x...:...x....:....x...x......x.:x:xx.x.::.x...:.x..... 101M 65/101 64.4% 101/94230402 0.0% 0/101 0.0% 118287250 71927305 +3145 chr4 + 190214555 129695004 129695003 129695108 105 CTTAAAGT----ATAATAAAAAAAAAAAAATTAAAAAAAAAATAAAAAAAATAAAAAAAAAAAAAAAGAAATAAACATT-CAAAAGGGAAAACCTAGATTCAAAAGATAA chr4 + 94230402 43587276 43587275 43587385 43587276 43587275 43587385 110 CTTAAATTCTCAACAATTAAATTAAAAAGAATCAAAAGCTATTAAAAAAAAACAACAACAAAAAACAGACATTAGAATGGCAAAAAGAAAAACAAGGGTTCAAAAAGCAA ......x.----.:...x...xx.....:.x.x....:xx.x.........xx..x..x......x...x..x.:x..x-.....:.:.....xx:.:.......:::.. 8M4I67M1I30M 74/105 70.5% 110/94230402 0.0% 5/105 4.8% 86107728 NA +17880 chr4 + 190214555 129707834 129707833 129708358 525 AAGTGCCTGAAAACAGGGATAATACAATGCAAATTGGTCTTTGCATGTCATTAACCTGACATCGATGATGTGCCTTGCTCAATTTCAGTATTTAATAAGTGTCCAATTTTTAAAGTATGAATAAAAATTAGAAACAATAAC--AAGTAAGTTACTTTCCAATAAATAGACATGTCCTCACTGATTTAAGGATAGTAATTGGGTGTAGCACATTAACTAAGTGGCCTAGAGCAATTTTGTAATAATCTTCTAAGAGCTTAGGGAAAA---------------------------------------------------------------------------AAAAT----------------CAACATTTTATTACTCTTAACACACTGCAGTTACTGCTTCTCTTAATTCATTTTAGTGAGCTGTCAATAAATTTCACTCCATTAGATGCTGAATTTAATTAGCTCCAGGGTCACATTTTATGTGATTTCTAAATTGTGTGCTATTTACAATGTCTAGTAAATGTTACCTGTGGCAACATAAATATATTTAATCTATAGCCAGTAGTAGACAATTATTTTTCATTCCCTGGATATTACACATT-CAAAACTGCTGTTT chr4 + 94230402 26798417 26798416 26798970 26798417 26798416 26798970 554 AAATGACTGGAGAAAGT--TAATACAATGCAAATTAGTACACGTATGTCATTAACTTGACATC-------------------------------------------TCTCTACAGTA-----------------CAATAGTCTAAGTAAGTTGTTTTCCAATAAATAAGAATGTCTTCTCTGATTAAAGGGTAGTAATTGGCTTTTGTATGTTAATGGTGCAGCCCAGAGCAATTTTATAATAACCTTCTAAATGCTTATAAAAAAACCCAAACAGCAAACAAACAATAAAACCAACTCCAAAACATAATTAACAAAACAAACCCCCAAACCCCATTGAACAAAATACATACACAGACACCCCAACACTCTATTAGTTTTAACA-AATGCAGTTACTACTTTTCTTAATTCATCTCAGTGAGCTGTCAGTAAATTTAATTCTATTAGATGCAGAGTTGAATTAGCT--AGGGTTGTGATTTACATGATTTCTGACCTACTCATTATTTACAATTTCTAGTAAATGTTGCCCAAGGCAAAATAAAAGTACTTAATTTATAGACAGTGGTGAGCAATTGTTTTTCATTTTGGTGACAATAAATGTCACCAAAGTGCTGTCT ..:..x...:.:.x..x--................:..x:x:.:...........:.......-------------------------------------------.:.:..x....-----------------.....::--.........::.............::x.....:..x......x....:..........x.x.x.:.::....:x:x.::...:...........:......:.......:x.....x::....---------------------------------------------------------------------------.....----------------.....:.:.....x.:......-.x..........:...:...........:.:............:.......x.:..:.........x..:..x........--.....::::x....::........:.x:.::x:::..........x.............:..::x.....x.....x:..:.....:.....x....:..:::.....:.........::xxx..:.x..x.::.:-.x...x......:. 17M2D44M43D11M17D7M2I123M75I5M16I22M1D81M2D136M1I14M 351/460 76.3% 554/94230402 0.0% 159/460 34.6% 102909417 87305138 +3492 chr4 + 190214555 129713653 129713652 129713725 73 TGCGCTTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGAATCGCTTGAACCCAGGAGACGGAGGTTGAAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........:.::...:....x.xx.x...x.:...........:..x:xx:..:..x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 53680448 NA +21058 chr4 + 190214555 129751406 129751405 129752624 1219 TTTCCTTTTCCTACTTCCAATTTGTATGAAAAGGAAGTATCACTGTATT----ATAATTTTATTA----TTTATACTTAATCAAACACAACTGAAAGTT-CTAATTATTATTTATCTTAATGATTCATGAAATTATATTGGAAGAGTTCCTA-TAATATGTACAGAATATTCCCAAGCTGTGCAAAATAATTACCGTTGATGAAAGAGCCACAGTGAAACGGTATTTCACAAGTGT----TTGGAGTTATTCTCACCAGGGGCAGGCTGTGGATCATTGGCATTAACTAATGATGACCTGAGATCAAAGACAGAACCCTATGGAACTCCAGCTTTCAAGGTAGCATAATAAGTCTGAAATGTCGAATGAAATCTTCTACAAATGAAATTTGAAGTACAATAATGGCCCATCAAAACTGTCAAGCTAGCTCTCCA-ACTGATAGACACACACAAACACACACACACGCACACACACTCACACCCCACATGATTGATGATTTAAAAGCTCTAGGCTAGGAAAGTGAAATAGTTGCAGACAAATGACCAAAAGCAAATTTTTAAGTCCAGTTACAAAAAAGCAAATGTAACCAAGTCTATCATGCACTGCAGCATACCTC-ATGCCATGCCAAGAATACACAAAATGACCTTTCCAGAAAAGAAAACAAAATATAAGACAAAAGCAAGATTGATGAACAAAATCCTGCACTACCTCTAAACAGCAGTG-TTAAT----CAAGCAACTATAATTGTCCTGTTAACTTATATCAGCTTGCTTTTAAAGCTCTAAATTCTTAGTCTTTAGAGTAGACCATGCT-----ACTACTG-AATGTGTAAAAGCACAAA-GGTACAAATTTGGCATCCAGCAGAAAACAACAAGTTGTAAGAGCATACAAAGCTTCTGTGATGGCAAATCACTGATTATGTAAAATTAATTAGTATAATTCTGATCAGAACAATTATTTCTCTGTAACAGTTCG-TTGGAATTAATAATAA--------TAGGACAAAAAATTCTTAACTCATGTCTTCAACTGTTACTGCAAGCATTAAAAATAGAGCTGTGAAATCTTCGT---GAAGCCTGTGAGTTGAGCACACACTGCTTTACTTCTGAGAGAGAGAGAAGGCAAAAAGACAAGCTTAT--AGAAGATATTTAATTAAAGTCAGAAAGAACATTAAAATAGA-----AAAATTAGCTCAGTGAAAAGTATCTTTTCATTTCCACT---AAATCAGAAACAATTTAAAGACTGCAA chr4 + 94230402 26808748 26808747 26809906 26808748 26808747 26809906 1159 TTTCTTTTTC--ACTTTC--TCTGTAATAAAATGCAA-ACAACTTTATTTTCCACAAGGCTATTGCTGGTTTGCTTTTAATCAAACAAATATCATACCCATTAATTATTGTTTGATTTAATTATTAATTGAATGAGTGAGAAGTAGTTCTTGGTGGTTCACAAAGATGCCTCTTGAGCTGCCCAACAAAGTTATAAATAAAGAAGGA--TGTGAGAAAGTGGTACTTCAAAAGTTCCATGTTAATGTTAATATGA--AAGAACTCTCCATGAGTTATTTGCATTAACTAAAGATGACCTGAGATCAAAGTCAGAGTCCATTGGAGTTTGAGCTTCCAAGGTAGCCTAGT---TCTGAGATGTCTACTGAAATCTTCCAGAAATGAAATATAAACTACTGTAATGGGCTATCAAAACTGTCAAGCTGGCTCAGTAGAATGAGTGATGTGTTTAAGTC-------------------------------TGATTG-TTATTCAAAAGCTCCATG-----AAAGTAGAATAGATGCATCCAAATGGCCACAAGCAA-CTTCTGTGTCCAATTATCAAAAA-CAAGCTTAACAAAAACTGTCAAGTGCTGAATTGTGTTTTTCTATCACACTGTAATTTGATAAAATGA--TTACCCGTAAGGAGGACTTTGTATGC----------AGATTAATAAACATTTTTCCTACTTAGGGATACAAAGCAGTAATTAATATCACAAGTAA--GTAATT--CCAGTT--------TTAGCTCTCTTGTGAAAAATTTAAATATTACTTTT----GTCAACAACTCTTCAACACTATTGTAAAGTGTGCTGGCATAAAAGGTGGGGGCCTAACATTAAGCAAAGCTTGATAGACTGTAAGTACTCACAAAGCTGCTCCTGTAGAAAATCACTGAATATGTAAAATTAATTAGTGTAATTCTGATCAG--TGATTCTCTCTCAGTAATAGTTTGACTGGAATTAATAATCAGCTGCTTTTTGTAT------CTTTTAATATATGCTTCTGACTTT------GTGCATTAAAAATACAAC--TGAAAGTTTTGTTACGGAGCCT-TGCTGCAAGCTTTCATCTTTTT-----------AAAATAAAGGC---AAGACAAGCTTATGGAGAAGAAATATAATTAAAGTCATGGAAGAAATTGAAGAGGGTGGGTGAAATGAGGACAGCAAAGATTTCTCTTTTCTCTCCCCTTTAAAATCCAAAGCACTGGGGGGACTGAAA ....:.....--....:.--.:....xx....x.x.:-.:x...x....----.:..xx:....:----...::x:...........x.xx.x.x.x::-:........:...:x:.....x...x..x:...x.xxxx.:.:x.....:.:-.::.x:::.x...xxx:..:::.....:x...x.x.:...:x:x.:.x...:..--:::::x:..::....:....x....x:----..::x....x.x.x.--.:.::.xxx.::..::.:...x...........x..................x....::..xx....::.:x.....:.........x..:.---.....:.....x.x..........:.x.........x.:..x...x:......x.:.................:....xx:.-.x...xx..:::::x:..::x-------------------------------......-.x...:........:.x.-----.....::.....x....xx......:...x......-:..:.:x.....:...:x.....-...::x....x..:x..:...x.::...x.x::.:::.:-x.::..::.::x:.x.xx.:.......--..x..x.x..:..::..xxx:...:x----------.....:..:....xxx.:.:xxx:..xxxx..x.x......:-.....----....:..--:.....--..x...--------.:....:x...x.:..:xx:.x..x.x...x.:..----..x:..x.:x..-----....:..-..x....:xx:...:...-...:x:::::.::...:x....:.:xx::.:.:::......x:.x:........x..x:x:.:.x..........x..................:.............--::...x.:....x....:....:.-:.............x.--------.x.x.:------:.:....:x:...::.:::...x.------:x............x.:.--.....x:..:..---.:.....-..xxx::...x:x..::x:...-----------.:.:x:.....---.............--......x..x............x::.::.x...:..:x:.:-----:....x..xx...::..:.x.x:::...:x.:...x..---.....x:..:..x.xx:::.....x.. 10M2D6M2D17M1D11M4I12M4I30M1I52M1I54M2D27M4I15M2D92M3D82M1I21M31D6M1D18M5D36M1D23M1D39M1I27M2D26M10D42M1I5M4I7M2D6M2D6M8D35M4D12M5I7M1I18M1I108M2D24M1I16M8I6M6D24M6D18M2D12M3I7M1D22M11D11M3D13M2I41M5I38M3I27M 735/1109 66.3% 1159/94230402 0.0% 160/1109 14.4% 102942658 87271897 +12923 chr4 + 190214555 129767301 129767300 129767553 253 ACAAAAATAGTCACATGAACTTTGGCAAATATTATTTTGCAAATGCCACTCTTAAGAGAAGTATGGCTA---GCAGTAACCTGACATTTATAACTATTCTAAATAATGCAACAAAAGCATTTTCAAGGTTCATGTGCATCTTTTCATATGCAGACTTTGCAGTTCTCTTTAATAATTTAGCTTGTTTGGACACACCTTACTGAATCATATTTTTTGAGTTGAAAAATATATTACCTTGTGAGTCAGTCAAGCGTTT chr4 + 94230402 26813139 26813138 26813392 26813139 26813138 26813392 254 ACAGGAAAACTCATATGAACTTTAGCAAACATTATTCTGCAAATGCCATTCTAAACAGACATACCTCTATGAACAGTAGCCTGACATTTATAACTGTACTAAATAATGCAACAAAAGAATTTTCAAGGTTCATGCGAACCTTTCCACACGCATACTTTGCAGTT-TCTTCAATTATTTACTATGTTTAGAAACATCTCAGTAAATCA-GGTTTTTGAGACAAAGCAAATATTAACTGTTGAGTTACATGAGTGTTT ...::..x.x...:.........:.....:......:...........:...x..x...x:..:xx...---:.....:................:.x...................x................:.x.:....:..:.:...x...........-....:...x.....x:x.....:..x...:..:.x.:.....-:x........x::..:x.x......x..xx.....:.xx::..:.... 69M3I92M1D42M1D48M 195/251 77.7% 254/94230402 0.0% 5/251 2.0% 102954162 87260393 +19121 chr4 + 190214555 129782529 129782528 129783042 514 TCTCCACTTTAAAATATAGTCTT---ATTTGTATAAACAGAGCCATATTTTTTGATTGACAGTTGTAAATATTTTTAAAA-------------------------TTCATTTTTGAGAATGGCATTTGTCGTGGTTAGGACTACTT-CCTTGTCAAGATTCAGCAACTCATCTTGCAAATGATACAGTATTTTTGAAGAGCTTTATCTCATCAAATGTTGTTAAAATGTAAATAAAATAAATAAAATAAAATTTGGATCCATGGGGTGCCTCTAATAGCTTTTCCTCCTTGACAAGGAGCTAATTTGAACTTCAACTAACC--------AGCTG---ATTTTTATAAGGTTGCAGAAACTGACAGTTATTTTTCCAGTGATGCTTGCCAGTGTTCTATCTCACTTTAA-TTCCAGAGTCAGTGGGCAATACCC-ATATCTATGAATTACATGTTAAAAAGGGATTTATGAATTATGGATGAACTGGGACAGTTATTGGTATTTAAAGGCATCCTACTTCATGTTGAATATTAATAGAAATGAAAGACTGGAGAAAT chr4 + 94230402 26821508 26821507 26822053 26821508 26821507 26822053 546 TCTTCCCTTTGAAACCTAGTCTTTGAATACCAATGAACAAAATAATGTTTTT-GATTGACAGCTGTAA-----TTTAAAAACAAaaacaaacaaacaaacaaacCTTCCTTTCAGGGAATTG--TTTGTAATGGCTTGGAATATTTGCTTTCTTAAGATTCAGCACCATTTCTCACAAATAATACAATATTTCTTAAGAGGTTTACCTTGTCAAACATTGTTAAAATATAAATAAAATGAACAAAATGAA-TTTGAAGTTACTGGGTACCAGTAATAGCTTTTTGTCTTAGATGTGAAAGAAATATGAACTTTACCTAAACTTTACCAAAACTGTAGATTTTTTTGAGGCTACACAAAATGACAGTTACTTTTCTA-TGCTGTACACTACAGCTTTTTCTGGCTTTAAGTTTTGGAGTCAAGGGGCAGCAAGTGATACCTATGGATTTTGTGTTAAGAAGAAGTTCATAAATTATGGATGAAGTGGGACAGTTATTAGTATTTAAAGACATAATTCCCGAAGATGAATATTAATAGGTGTAAAAACCTGAAGGAAT ...:.x....:...:x.......---..x:xx..:....:.::x..:.....-.........:.....-----.......-------------------------...x...:x.:....x.--.....x:...:.x...x..:..-.:..x.:...........x.x:x...::.....:.....:.....:.x.....x....:..::.....::..........:..........:..:.....:..-....:.x::.:x....:..xx...........:x..:.x..::x.:.:xx...x.......:.x....x.--------.:...---......x.:...:.:..x...x.........:.....:.-..x..:x::.:.xx.:.:.x...x:......-..:::......:x.....::.xx:-...:.....:...x::......:...:::..:..:.............x.............:..........:...xx.x.::x.x.x.............:x:.:...:x...:..:... 23M3I26M1D15M5D7M25I17M2D22M1I103M1D70M8I5M3I39M1D31M1I24M1I122M 368/504 73.0% 546/94230402 0.0% 52/504 10.3% 102961021 87253534 +35044 chr4 + 190214555 129788372 129788371 129789288 917 ATTTTCTAAGAAATCACAGCAGAGTTGTACACACTACTAAAGTGGAATTTAGCAAAA----GATACGATGCACAGGGT--ATCTATTATTTCTGATTCTTTGATAAA-------------------------CCTTAACTTCCACATCTCAGAAAGAATATTTGTTTTAGGTAATTTGTTATTAGCTATAGTACTTAGGTCATTTTCCTCCCTCTGTCATTTTTTTGATGGTTGTTCATTGTTAGAAGGGGGTGAGAGGTGAAATCAAGTCCAACAGTTCAGTGGACCAGAGATGTGATACGCAGAGACTGAAGCTGTAATTACAGAGTCACTGTGTGGAGCCTTATGAGAGAATGTCCTCACTGTGAAGCCTTCTGTTTTGTCAATACACTTACATCAATACTTGGCA-GTCAGTTCTGCTGCTTTAGGGCTTCAGCATACAAAATAGACAAAGTCACTAATATCAAATTTGAGCTACGTTGCATTTGCCGTTGACAAATCTTATTTCAGAAATATGCATGAGCATGAGGATCAGATCAAGCTTTTAACATTTACTTTTTTTTTTTTCTAGCAGGGAAGACTCTCTGATCCTCTCATAATTTACCTATTGTTGATTTCCTGAATCTTTTTAAATCCTTTGCAACTGAAGATGGTCTCTCCATCAGAGAAGCAATTAACCAAATGCCTGACTACAGCGTATATAGCATCTGTTATAAAAGCATAAAAGGTTAACTTAAATCCTGGCACACAAAGGAGATGTCAGACCAGAACAAATCAGCATGGAAA--TACCTGGAGGAGATACAAGGTTAAGGTGGAGCATATGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGTTAGAAATGACA--TGTCTATTATGAATCAACA-TAATTCATCTTCTGCAGCTTTTACCTGACAAA chr4 + 94230402 26822834 26822833 26823723 26822834 26822833 26823723 890 ACTTTCTAGAAGAT-GTGGTAGAGATCTATGTGCTACTAGAAAAAGATTTTGTGAATTTTTGATGAAATG-GCTGAGTTAACCCATTATTTCTAAACCCTAGAGAAAGAAGTGTAACGTTATTTTAGAATAATTCTGGTTTTGTGAGTTCTCAAAGATTATTTGTTTCAGATAATTTATTCCTACTTACACAAGCTAATTCTTTCTTTT----------TATTTTTGGTGA------ATTG----------------------------------AGCACAGTATGTTAGAGATCTGATATGCAGAGACTGAAACAGTAATTACAGAGTCACTGTGCGGAGCCTTGTGATATGATGCCCTTACTGTGAAGCATTCTGTTTTGTCAATAAGCTTACATCAATACTTGGCAGGTCATTTCTGCAATTTTAATGTTTCAGAATATAAACTAGACGAAGTCAGTAATACCAAATAGGAGCTGCTTTGCTTCTGAAATTGACAAATCCTATTTTGAAAGCATGCATGAACATGAGGATCAAACTTAGATTTTAACATTTACATTTTTTTTTG--CAATTGGAAAG--TGTCTGATCCAATTCTAATTTACCTGTTGTTAATTTCTTGAATCTTTCCCAATCCCTTGCAGCTG-AGATGTCCTCACCATTGGAGAAGCAATTAACAAAATCCCTGACTGGAGTCTATGAAGCATCTGTTAAGGAAGTATAAAAGGTTAAGTTAAATCCCAGCACAC-----AGTTGTCAGACTAGAACAAATCAGCATGGAGAATTACCTGGAGGCACCACAAGGTTAAGGTGGAGCATATGTGTGGTAAAAAGGTTGTTTATGACAAGCAGAATTAATTTTCCAGGATGAGAAGGTCAGACATGCAGAAATGAAGGCTGTCTGTGGTGAGCAGAGACTGTTTTAGGCTCTG--GATTTCACCTGGCAAA .:......::.:..-:::.:....x.x..::::......:.:x:::....x.::..x----...:x:...-:.x.:..--.:.:.........:.x:.:.x..x...-------------------------:::.:::..:xxx.x:..xx.....x.........:..:......:..x:..x:..:.xx.x:..:x..x..:.::.----------.x......:..:------....----------------------------------..:x....:x:::......x.....:............:.x....................:........:...x.x:...:...:..........x................x:...................-....x......x::....:x.:.....x...:...x.....:......x.....:.....xx.....:.x....x.:..xx:..........:.....:::..::........:...........:.::x..x.............x.........x--:.::x..:...--.x........xx.:x..........:.....:.....:.........::x.....:.....:...-.....x:...x....::..............x....x.......:x..:x...:x...........x::...:............x........::......-----..x........:..................:.--..........x:x:........................:::..x..:...x....:.....x..::....xx:....:...:x..x:...::::..x:xx:........x:--.....:.x:...::x:.x.-.:x..:.xx:....--.x...:.....:.... 14M1D42M4I9M1D7M2I27M25I77M10D12M6D4M34D134M1I157M2D11M2D65M1D102M5D32M2I111M2I19M1I14M2D16M 631/853 74.0% 890/94230402 0.0% 101/853 11.8% 102965538 87249017 +3288 chr4 + 190214555 129801665 129801664 129801719 55 AGCATTGTTATTATTCCCATTTTCCAGATAGAAAACTGAGGAATAGATAAGTTAA chr4 + 94230402 78478605 78478604 78478659 78478605 78478604 78478659 55 AGCAATATTACTATTTCCATTTTACAGATGGAGAACTCAGGAACAGAGGAATTAA ....x.:...:....:.......x.....:..:....x.....:...x:.:.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 51323060 NA +18726 chr4 + 190214555 129804422 129804421 129804817 396 ATATACTGTTTCACTGTGCATACGTTAAAATGTGAAATCCTTTAA--ATGCAAACAGCACTTGTCACTCCATCAACTATTCAAATTGTCAGAGAT-GTATCAACTAACCCTAGCTACCCTCTGCAGGCGATCTGGAGCCAGCCTGCTGTTTAATAACCAGCATTTAACAAGAAATAACATGTAGATGTGGTGTGTGGTTTAAAACATTGTGTTAAGCATCATTAAAACTCAGTCTCCTAAGAGCCTTATT---AAGAGTCCTTTC-CTCACCATAATAAAACA-TTTCTCTGTGACTGTTTCGATCTAGTTGC-TAACAATACAAACAAAATGCCTCTTAATTTAACATCCCACTAGAGGGCCATTGTGATTGTAGAACTGTAAAGGCAGGGAGAAAAAAAAAAC chr4 + 94230402 26827230 26827229 26827632 26827230 26827229 26827632 403 ATAAATAGTTTGACAAAGAAAATGTCAAGAAGTGAAATACTGTGAGAATTAAAATTGACGCTGTC-TTTCATCAA-TGTTGAGACTGTCAGAACTTGTACAAGGCAGACCTAACTATCCACAGCAGGCAATCTGGTGCCAGCTTGCTGTTAAATAACCAACATTTAACAAGGAATAGCGTGTAAATGTACCGTGTGGTTTAAAACACTGTGTTAAGCATCATTAAAACTGAGTCTCCTTAGAGCCTTATTAAAAAAAGTCCTTTCTCTCTCTGTAATAAAACATTTTCTCTCTGACTGTTTCAATTAAGTCTCTTAACAATACAAACAAAATGCCTCCTAATTCAGTACCATACTGGAGAACTACTGTTACTGTCAAGTTACAAAAGCAGGTGGAAAAAAATAAC ...x.:x....x..x:x.x.x.:..:..:.x.......x..x.:.--..xx...:x.xxx:....-:.:......-.:..x.:.:.......:x.-...:x.:x:.:x....:...:..x.x......:......x......:.......x........:...........:....:.:....:....:x:...............:......................x........x...........---..:.........-...x.::..........-.......x..........:..:x...:x.-.......................:.....:.::.:.x:...:...::.:.:...x.:...x:.::.::...:.....x:........x... 45M2I18M1D9M1D19M1I154M3I12M1I17M1I29M1I91M 302/394 76.6% 403/94230402 0.0% 11/394 2.8% 102977192 87237363 +3673 chr4 + 190214555 129814275 129814274 129814476 202 CTGGGTGACAGAGTGAGATCCTGTCGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAGGAAGGAAGG---AAGAAAAGAAAGAGAGGGAGGGAGGGAGGGGAGAATTGAAGGAAACTGGAAAAAT---TGAGTTTTTGACTTCTG chr4 + 94230402 61867077 61867076 61867284 61867077 61867076 61867284 208 CTTGCTGTCAGTGGGAGATCCACACAGAAAAGGAAAAGCATGTCTAAAAGTAGAGAGCTAGGCGAGAAGAAATCAGAAGTGGAAGGAAGATAAGAAGGCAGGAAGAAGATGGGAGGTCTGGGCAGGAAGGCCCAGAGACACTGAGACAAAAGGGCAGCAGGAAAAGATATGAAGGAATGAGAAGAGCTCAATAAACATTTGACCTCTG ..x.x..x...x.x.......xxx.::..:.:::..:.x.x.xxx:..:.x..::..xx...x::....:..xx.::::x.........:x.......x......:.:.x::.:::xxx:..x.......---.:::.x.xx:...x.::::..x..x::.:::...xx........xxx.:.:.:x.---.:.::x......:.... 130M3I55M3I17M 115/202 56.9% 208/94230402 0.0% 6/202 3.0% 67947198 NA +3923 chr4 + 190214555 129814335 129814334 129814456 122 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAGGAAGGAAGGAAGAAAAGAAAGAGAGGGAGGGAGGGAGGGG-----AGAATTGAAGGAAACTGGAAA chr4 + 94230402 1500702 1500701 1500828 1500702 1500701 1500828 127 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaa .....::.:...:.:x..::.....:.:x..::.:.:.:.....::...x.:.:....:..:..x:::..:x..x.x..::.::.x::...:...:.::x.-----.:..xx...:....x...... 101M5I21M 74/122 60.7% 127/94230402 0.0% 5/122 4.1% 128313633 61900922 +4623 chr4 + 190214555 129814355 129814354 129814458 104 GGAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAGGAAGGA---AGGAAGAAAAGAAAGAGAGGGAGGGAGGGAGGGGAGAATTGAAGGAAACTGGAAAAA chr4 + 94230402 1500702 1500701 1500808 1500702 1500701 1500808 107 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaa .....::.:.....:x..::.....:.:x..:..:...:.....::.---.....:.::.....x..:...x.:x.x.::...:.x..xx........x........ 47M3I57M 73/104 70.2% 107/94230402 0.0% 3/104 2.9% 128313653 61900902 +14824 chr4 + 190214555 129842170 129842169 129842471 302 AGGGATAGGGTTACTTGCCTATTTCGTTTGGGGATAAAAGAAAACATAAAAAGGAAAGGAGCCCAGATGAATACTTTTTCTGCAATTAGTGGTGATGCATGTAGTGAACTGCTAAGCATCCATGACTAATCGAGATAGACAGGGCTATCCCTTGCTAATCACAGAAGATATTGGCCTGTCCGT-AGGAGAAAAGAGTGATTATATCAAAAAGAACAGTCAGCCATTACTAGGGCAAACT--CTGTCAAGAGTGTCTGTGAATTATAAGACAAAAGGATAGAG----AAATAAAGGCAGTGTTAATTATC chr4 + 94230402 26833267 26833266 26833565 26833267 26833266 26833565 299 AGAGAGAAAATTA-TGGTCTTTTTTGTTTaaaaaaaaaaaaaaagaaaaaaaaG---------CAGACATTTTCTTTTACAACAATTAGTGATGATGCAGGGAGTGAACTGCTAAGTATTCATGACTAATCTGGATAGACAGGGCTGTCCCTTGCTAATCACAATGAATATTGGCCTGTCCATAAAGAGCAAGGAGTGATAATATCAAAGAGAACAGTCAGCTATTACCAGGGCAAACTTGTGGTCATGAGCTTCTGCAGATGATAATGTGAAAAGACAGAGATGAAATTAAAAGCAGTGTTAACTACC ..:..x.:::...-.x.:..x...:....::::.x....:....x.x.....:.---------....::xx.x.....x.x:.........:.......x.x..............:..:...........x:.............:................:x::..............:.-.:...x..:.......x........:............:.....:..........--:x....x...:x....:::..x....x:::...:..:....----..x....:..........:..:. 13M1D40M9D120M1I55M2I41M4I23M 227/292 77.7% 299/94230402 0.0% 17/292 5.8% 103008903 87205652 +3012 chr4 + 190214555 129860628 129860627 129860682 55 GTTTTTAAGTTTTAGTTTTTTGTTTTGTTTTGGTTTGGTTTTTTTAAGTTTTTTT chr4 + 94230402 26045527 26045526 26045581 26045527 26045526 26045581 55 GTTTTTAGGTTTGGGTTCTTTCATTTTTGTTGGTTGGGTTTTTGTGGGTTTTTTT .......:....x:...:...xx...x.x......x.......x.::........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 103815101 86399454 +3110 chr4 + 190214555 129893385 129893384 129893438 54 ATTTGGCTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACATGTAAAC chr4 + 94230402 60831529 60831528 60831582 60831529 60831528 60831582 54 ATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ..:.:x....x.............x.x.......:.:....:.....:.:.x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 69061856 NA +3117 chr4 + 190214555 129894316 129894315 129894387 72 GCACCTGTAGTACCAGCTACTCAGGAGGCTGAAGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......x.........::::.......:x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 53861110 NA +32708 chr4 + 190214555 129926717 129926716 129927587 871 AATGTAATAACAACACTGCTGTTACATAGTGATTGGTA-TTATAAAATGTGCTGTGAGATAAATGCTGTTATTATGAAAATCCTATTAGCAAGTCCCTATGTACTGTACATGCAGGGCCGATTTATTAACATACCCTCT-GTAGTCACTTTCCCAAAAACAGTTTTACCAGCTATGAAATACTATGCAATAATGCCATTAATAAATGTATCTAATTGCAGTATATAAAAGTGAAACATTGAATAGCTTGAAATGGTTGCTGTGAATGGTGAGATTATTTCAAGTAGATGTATTGAGTAAAGGATAAC-TATGCTTCCCCTTTTTTATACTGCCACATGTCAAGTAATAGATCATTTAAGTGCATAGTCAGACAGCTGGGCTAACAAGAAAAAGTTGGTTCTTTTATAAAAAGCTGTCAGTAGATGGCAATGTGACTGTTTTATAAGGCATTTTTATTCCATATGGAACTACAAACTTGAGATCATTCACATTTGCTACCTAAATTACTGTA------------------------ATTTTCCCCAAAAAAAGAGCTCCAAGAGCCCTTTTAAACTATTCTTTAAATAATTGATAGTTACAAATGAAAAGCCAAGCCTAGAATTTCC-AAAGTGATCAAAGTTGTTTTAATTTTCCATTGGTCAGGGTTGAATAAAAATAATGTTACAAACTATACCATCAATAACTAGGAATTGCAGAACCTCCATTTCAAACTGAAGTACTTTTAGCAAATCCACATCATACCCTCACTTAAGCACTGCAGCCAGCTATGGCCCAGTGGTGCTGCACTATTAATACAGACCCAGAGGAATGCTG---------TTGCATTGAGAAAAGTTATTTTGGTATG----TTTTCACTCTTTCTTTTATCCTTCCACCCTTCTCCA chr4 + 94230402 26859964 26859963 26860861 26859964 26859963 26860861 898 aacataagaaaacaagtggtattactttgggagcagcccttgTAAAATGTGCAGTGAGATAAATGCT---ATTATGGAAATCCTATTAGTGAGTCCCTGTGTACTGTGCCTGTAGCACAGATTTATTAACATACCCTTTTGTAGTTCGTTTCGTGAAGACTGTTTTACCTCCTATGAAATATTGTTCAATAATGCCATTAATAAATGTATCTAATTGCAGCATATAAC--TGAAAGCCTGAATGGCTTGAAATGGATTTGAAGAGAAGTGGGATTATTGCAGTGGAATGTATTGAACAACATATATTGTATGTCCCTAATTTTTCATAGTACTGTATGTCAGGAGAAAGAACGTTTA-GTATATAGCCAGGCA------CTTAATGGAAAGAGCAAGTCTTTTTATAAAGAATTGTCAGTAGATGGCAATGTGACTATTTTATACAGACTTTTTATTTCACGTGAAGCTTAAGATTTGTCATCATCTTCATTTGCTGCTTAAATTACTGtatatatatatatatatatatttttttttttttttaaaaaaaaaGCTCAAAGAGCTCTTTAAAACTATACTTTAAATAATTGATAGTTACAAATGGAAACCATGGCCTAAAATCTCCAAAAATGATCAAAGTTGATTTAATTTTCTAATGGTCAGGGTTGAATAAAAATCATGTCACATTATGTGCTATCAGTAAACAG--ATTACTGCTCTTACGCCTCACGTTGCTACAGACTCAGTAAACCCATGTTTTATTGATAGCTAGACACTTTGGCCATAACTCATCCAAAAGTATGGTGCTTATAATGAGCACCAGAAGGAATAACAAAAATAAACATGTGCTGTCAACAGTACAGCTAGTATAAGGCTTACCAATGTTTCTTCTTTCTTCTCTTCCCTCTTCA ..::...x..x.xx.x..x.:....x.x.x..x::.:x-..:..........x..............---......:............::.......:........:.x..:..x:.x..................:.-.....:xx....x::..:..x........xx..........:.:.x..................................:......x--.....xx:.....:...........x.x:x:x..:x:...:.......x..:xx::.........::..x:x...x:-....:::.:xx.....:...x.:.:::......:.x:.x...x.:....-..::....:...:..------..x.xx:....:..:x:..::.........:.::.......................:.......x:.xx........:..::..:.:..xx.:.:...xx.....::x........:.:............------------------------x....::::.......:.....x......:....x.......x..........................:...x.xx:.....:...:...-...:............x..........:.x.....................x....:...xxx.:.:.:....:...x:..--...:.x.xx.:.x.:::...x::..xx::.xx:.:..:...:...::.:x..::xx:.x:..::....x::....xxxx.x::...:x:..::x.::..xx....:x:x...x::......:x::---------x..:::..xx..x...xxxx:.:....:----..x:..x.x......:.x..:.::.x:..:...:.. 38M1I28M3D69M1I88M2D77M1I49M1D15M6D132M24I91M1I81M2D125M9I28M4I36M 604/857 70.5% 898/94230402 0.0% 55/857 6.4% 103066753 87147802 +3142 chr4 + 190214555 129928352 129928351 129928403 52 GCTGAATTTTTTTCTTTTTTTTCTCTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 + 94230402 66404522 66404521 66404573 66404522 66404521 66404573 52 GCTGAACACGTTCCTTTTATTTTTCATCTTTTTTTTTTTTTTATGAGATGGA ......:x:x..:.....x...:..x.:..............x......... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 63523830 NA +3086 chr4 + 190214555 129940233 129940232 129940289 57 TTTTTTTTTTTTTTTTTTTTTTTTTAATCACATCTATTATTATTTTGGCTTCTTTCT chr4 + 94230402 77473791 77473790 77473847 77473791 77473790 77473847 57 TTTTTTTTTTTTTTCTCTTTTCTTTTAGCATAGCTATTATTATTGTTTCTACTGTCT ..............:.:....:...x.x..:.x...........x.xx..x..x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 52466442 NA +26686 chr4 + 190214555 129951420 129951419 129952127 708 TGCTAAGTCATTTGATTTACTTCAAATTTCTTTGCTTTAGGATTATAAATCAGACTCTTATTGTCACTTTAATGCAGAAAGGATTCTTTTGTGTTCAT-AATATAGATCAAGATGTGATTTAAGTTGAATCTTGTCAAG--GTAACTCCTTTTTAAACTATGAGAAGAGATTTGGCTGTAGCCCAAAACTAATGGGACTCATATTTTATAATAAAAAGCAATATGTTAGTAATAGAGGCTTTGCTGCTTCTTGCTGTCTCCACAAGCACAAATTCTTGTCAGTTTTC--ACAGCTAATGCATTTTTTGTCCAGTCATAAGCACTTTTAAAAAG-TCTCTACTTAATATTGTGGAAGACAGAAATTCTAATTTTCCAAAGGAAGCAGTGAAAATAGAGATCTT-AGCCTGGAGGAATAAGATATAAGATGCTTGACTATCAAAAGAATCCCATTTTGAAAAGACAGACCATCAGAAAGT-----AGTGTGAATATAAAACTGAACAAATCTTCAAA--TTGAACATAAAGGGGTGTCACACTTCCAGTATCTTTCCT----CTTCCCCACATTTTAGA-AAGGATCTTTCAACTGATCAAATGTAAA-AGATGATAGGAAGTAATTTATAT-TGTTCACATCTACTATTT-AATGACTTCTTTG-----AGAAATGAAAGCTAATTTCACTTGTGT--TTGCCATATACTGCAGACACTTGTCACACATTGCATATAG chr4 + 94230402 26868546 26868545 26869269 26868546 26868545 26869269 724 TGCTCAGTTATTTCA---GCTCTGAATTGCATTGTGCTAAGAGTTTAAATCATACCCTT-TTGTCACTTTAATGCAAAGTGGATTTTTTTGTATTAAGGAATGTAGACCAAGATGTGATTTAGGATGAATCTTGTCAAGATGTAGCTCCATATTAAATTCTTGGAGAA--CCTGGCTGAAGACCAATGTTAATGTGAGAAATGTAT-AGAGTAGGAAGCTTTATGTCAGCGAGGAAGATTTTATGGGTTCTTGCAGCCTCCGGAAGTGCA----CTTGTCAGTTCTCCCACAGCTAAGGCGTTACT-GTCAAGTTGTAACCACTTAAAAACACCTTTCCGCTTAATACTGTGGTATACGGAGATTCTAATTTTCTGAAGGAAGTCACAAAAATAGAGATTTTTAGCCTGCAGGAATAGGATAGAATTTGTCTTACTATCAAAGGAATCCTCTTCTAAGAGGAGAAGCCATCAGAAAGTATAGCAGTTTGAATATAAAGCTGTACAAACCTTCAAACTCTAAGTATAAAGAAGTGTCAAATAGCTGATAGTTTTGCTTTCCTTTCCCCAGTTTTGATAGAAGGATCCTTCAGCTGATCAAATGTAAAGAGATGACAAGAAGTAATTTATACAGGATCATATTCACTATGTAAATGATTGCAATGAAAAAAAAAATGAAAGCTCATTTCTCCTGTGTGCTTG-AATATACAGCAGTTTCTCATCGCATAATACTTATGG ....x...:....x.---:..:::....x.x...:x:..:..x.x.......x..:...-................:.:x.....:......:..x.x-...:....:..............:.x..............--...:....x.x.....:.x.x:..::.--::......x..x....x::.....x..xxx..:.x.-.x.:..::....xx.....:..::.x::..::...::x.x.......x.:....:x...::..----..........:..--........x..:..x:.-...x...::...x.....xx...x.x-.:..::.......:.....x.x..:..:............::.......:x:::...........:..-......x.......:....x..xx..::.x.........:......:x..:.:.:.:..x.::............-----...x..........:...x.....:.......--:.:.::......::......x.:xx.:::..x:...x..----:.......xx...x.x.-.......:....:...............-......:.:.............:-x.x...:..::.....x.-.....:.x.xx..-----.:...........x.....x.:.....--...-x......x....x:x..::..:..:.x.:.x...:. 15M3D41M1D38M1I40M2I27M2D36M1D63M4D13M2I17M1D26M1I68M1I75M5I32M2I39M4I17M1I28M1I23M1I18M1I13M5I27M2I3M1D36M 517/695 74.4% 724/94230402 0.0% 42/695 6.0% 103082874 87131681 +27150 chr4 + 190214555 129983810 129983809 129984415 606 TAAAGCTTAATCTATAATTACTACTTACAGTAAGCAAGG--AAGATATTTTATCGCAACTGACCTGGCTAATAGAGTGGGCTGGAAGGAAGGAAGCCTATTTATTTGAGACACCATGTGAAAACTTTGAAACACAAAGGGGAAAAGGCAGTTTCATTGAGAATAAAATATTCATGCTGATAACTTACATAAAACAAAAGATGGAGTGTTTTCTGCAGGGAAATTACTTTCTTTGATGAGCTCCATTTATGCATGATGGAGTTTTAAATTTTTGAAAACCCCCTTGGTTATTTTTTCTTCCTTTCAATTCTGGTGGTTTTAATTTCAGGC------ATAAACAGATGTAAAATTTTCTTGCTAAAAGCTTCTTACACTGTTTAAAGTCGGATTTATGACA-TAGGCAAAAATAAAATGCCGTCTTACAATGACAGTGAGTAGGAAATCAACAGTTAAGGCATCAGTCTCATGAATTGCACAATGAGCAGTAGCTCCCCCATTTGTTTTGATACTGCCCAATGATAAAATATATCTTCATTTACTTC--GCTCATTTTTAACATTGTTTTGATTGAAGCATATTCTTGAGGGATGCTGAGTATTATATCTGCTAACTAG chr4 + 94230402 26883515 26883514 26884122 26883515 26883514 26884122 608 TAATGCCAAATCCCAGACTCTCATATCTAGTGAGCTATGGCAAAATTTATAATTGCAATGGGCTTGAACAGCAAAGAGGA--AGATGAAAAAAAACCTATTTATCTGAGGCACCAAGC-AAAGCTATGAAATGCAAAGGGGTAATGGCAGTTTCACTATGAATAAAATATTCATGTTGCTAACTTACATAAAACAAAAGATGGAGTGTTTTCTGCAGGGAAATTACTTTATCTGATGAGCTCCATTTATGCATGATAGAGTTTTAAATTTTTGAAAACCCCCTTGGTTATTTTTTTCTTTTTTAAATTCTAGCAGTTTTAATTTTAGGCTTATAAACAGATAGATGTAAAA-TTTCTTGCTGAAAGGGCCTTATTCTTTTTAAAGTCATATTTATTACATTCAGCAAAAACAGAATTGCTTCTGTCAATGCCAGTGAATACAAAATCAATATTTAAGTCTGCAGTCTCATGGACTTCAAGTTACAAAGTGGATATTTCA---GTTTTAA-AATGCCCTATAATAAAATGTGTCTTCATTTACTTCCAGCACATTTTTGATATTCTTCCCGTTGTGAACTCTGCTCCAAAGATTCTAATT-TTGTACCAGGTGACTGG ...x..:x....:xx:.:.x::.:x.x:...:...x.x.--..:..x.x.x..:....:x.:.:..:x:.::.:..x..:--:..x.:..::..:.........:....:.....x.:-...:..x.....::........x..x..........:.:x................:..x..................................................x.:........................:......................................::.::...x......:.::..........:....------.:.:.:..........-.........:....xx:....:x..x.........:x......x...-.x:.......:.:...xx.x...xx.....x......:..x:.......:.x.....x.xx..........:.:.x..x:x.:x:x...:.x.x:::..---.....:.-.x.....x..:.......:.:..............--..x.......:.:...x..::x:...x::xx.x.x..:x.::...x..:.x.-..:..:.x.x.:...:. 39M2I39M2D36M1D210M6I16M1D47M1I99M3D7M1D35M2I52M1D17M 448/597 75.0% 608/94230402 0.0% 20/597 3.4% 103100295 87114260 +8310 chr4 + 190214555 129994898 129994897 129995219 322 AAAACATTTTTAATCATTAACACAAGGGAGTTTGCCACTTTTCAATAGAGGAGACATTGTGTACTAGTTGCTTTAGCCTTACGGCTGTTGATTAGTTACACAGATGTGTTAGAAATAGAGCTCCTAGCAATATTTAACATGACGAGCGAATGAATAAACACTGTTT-----AAAAAATATGCCTCATCT-------AAGACA--TTATGCTATTCTTATCAATTATTATATACAAGTAAAATGCAAGCCTGTGTGATTATACAGT------TTCTTTTATATCTAACCATTATTCATGAAGAAAATATTCAGGAACAGAAAGA-----TGATAAATGTTTGTGGAAA chr4 + 94230402 26889751 26889750 26890076 26889751 26889750 26890076 326 AGAATATTTTTA-TCATTAGCATAAAG-ATATTGCCACTTTCCAGAGTGAAACGCATTTT----------CCTTAGCCTTTAGGCAGTTCAATCTTTACACAGGGGCATAAGAAATACAGCTCCTGGCAGTTTTTATCATTACTAATAAATGAATAAGCACATTTTCTGGAAAAAAACAC-CCACATTTCTTCAGAAGGACAAGTTACACAGTTCTTATCAATAATTCTATGCAAGTAAAATTCAAGTGTGCAGGACTGTACTGTTGCAAATTTTCTTTTATACAGTTGTGTTTCATTAAAGAAA--------AGCAGACTGAGATTGTGATGAATGATGGGTGAAA .:..:.......-......:..:..:.-.xx..........:..:x:x:::.x:....x.----------.:........xx...x...x.x.xx........:x.::.x.......x.......:...:.x....x...x..x.:::.........:...xx...-----......:.:-..x...:.-------.:....--...::.x:...........x...x...:..........x....:x..::x..:.:...x..------..:.:..x...x:.::::.xx.....x..::...--------.:....xx..-----....:....x.x.xx.... 12M1D14M1D32M10D96M5I9M1D8M7I6M2I61M6I34M8D10M5I19M 214/301 71.1% 326/94230402 0.0% 46/301 15.3% 103105147 87109408 +3122 chr4 + 190214555 130011123 130011122 130011209 87 TTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATAT--ATTTATATATA chr4 + 94230402 81427529 81427528 81427617 81427529 81427528 81427617 89 TTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ........:.....::..:.::.xxxx.x.x.xxx..::......:...x.......:..::.:........:...--..xx:...... 76M2I11M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% 48583594 NA +3383 chr4 + 190214555 130011133 130011132 130011287 155 ATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATT chr4 + 94230402 72529188 72529187 72529340 72529188 72529187 72529340 153 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAATTTTACTATAATGACACACTTT ...:...:.....:x...........x.....x:..x....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.::.x.:.:.:.:.x.:.:..:..x......x:xx...x..xxx.x....xxx....x.x.:.:.:x.. 72M1D7M1D74M 96/153 62.7% 153/94230402 0.0% 2/153 1.3% 57481945 NA +3383 chr4 + 190214555 130011133 130011132 130011287 155 ATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATT chr4 + 94230402 72525615 72525614 72525767 72525615 72525614 72525767 153 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAATTTTACTATAATGACACACTTT ...:...:.....:x...........x.....x:..x....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.::.x.:.:.:.:.x.:.:..:..x......x:xx...x..xxx.x....xxx....x.x.:.:.:x.. 72M1D7M1D74M 96/153 62.7% 153/94230402 0.0% 2/153 1.3% 57485518 NA +3224 chr4 + 190214555 130011209 130011208 130011325 117 ATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATA chr4 + 94230402 72529188 72529187 72529302 72529188 72529187 72529302 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:...:.....:x...........x.....x:x.:....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.:x.:.:.:.:.:.x.:.:..:....x.... 72M1D7M1D36M 75/115 65.2% 115/94230402 0.0% 2/115 1.7% 57482021 NA +3224 chr4 + 190214555 130011209 130011208 130011325 117 ATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATA chr4 + 94230402 72525615 72525614 72525729 72525615 72525614 72525729 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:...:.....:x...........x.....x:x.:....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.:x.:.:.:.:.:.x.:.:..:....x.... 72M1D7M1D36M 75/115 65.2% 115/94230402 0.0% 2/115 1.7% 57485594 NA +3274 chr4 + 190214555 130011243 130011242 130011350 108 TTATATATATATTTATATATATA----TTTATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATATATTTATATATATTTTATA chr4 + 94230402 81427529 81427528 81427637 81427529 81427528 81427637 109 TTATATATGTATTTGCATGTGCAGAGCTTTTTCAATAC--GTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA-ATGACTTTATGTGGCTTACA ........:.....::..:.::.----...x.xx...:--:......:...x.......:..::.:........:...xx..xx:......-..:x:.x...:.:x:...:. 23M4I11M2D51M1D20M 73/105 69.5% 109/94230402 0.0% 7/105 6.7% 48583714 NA +3446 chr4 + 190214555 130011394 130011393 130011511 118 ATTTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATATTTTTATATATATTTATATATTTATATATATTTATATATAA chr4 + 94230402 72529188 72529187 72529303 72529188 72529187 72529303 116 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACA-TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAA ...:...:.....:x...........x.....x:..x....x.xx.x:..:xxxx:.x.:..x:.:..:...-..:.-.......:.::.x.:.:.:.x.:.:.:..:x......... 72M1D4M1D40M 77/116 66.4% 116/94230402 0.0% 2/116 1.7% 57482206 NA +3446 chr4 + 190214555 130011394 130011393 130011511 118 ATTTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATATTTTTATATATATTTATATATTTATATATATTTATATATAA chr4 + 94230402 72525615 72525614 72525730 72525615 72525614 72525730 116 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACA-TTTTATACACGTGTGTGTGTGTGTGTGTACATATATATAA ...:...:.....:x...........x.....x:..x....x.xx.x:..:xxxx:.x.:..x:.:..:...-..:.-.......:.::.x.:.:.:.x.:.:.:..:x......... 72M1D4M1D40M 77/116 66.4% 116/94230402 0.0% 2/116 1.7% 57485779 NA +3086 chr4 + 190214555 130011431 130011430 130011549 119 TATATATATATTTATATATATTTATATATATTTATATATATTTTTATATATATTTAT--ATATTTATATATATTTATATATAAATATATATAAATATATATATATATATATATTTTTTTTT chr4 + 94230402 72529193 72529192 72529311 72529193 72529192 72529311 119 TACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCT ..:.....:..x.......x.......x:..x....x.xx..:..:xxxx:.x.:..--.:..:...-..:....-....:.x:.:.:.:.:x:.:.:.:..:.........xxx....:. 57M2I8M1D7M1D45M 78/117 66.7% 119/94230402 0.0% 4/117 3.4% 57482238 NA +3086 chr4 + 190214555 130011431 130011430 130011549 119 TATATATATATTTATATATATTTATATATATTTATATATATTTTTATATATATTTAT--ATATTTATATATATTTATATATAAATATATATAAATATATATATATATATATATTTTTTTTT chr4 + 94230402 72525620 72525619 72525738 72525620 72525619 72525738 119 TACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCT ..:.....:..x.......x.......x:..x....x.xx..:..:xxxx:.x.:..--.:..:...-..:....-....:.x:.:.:.:.:x:.:.:.:..:.........xxx....:. 57M2I8M1D7M1D45M 78/117 66.7% 119/94230402 0.0% 4/117 3.4% 57485811 NA +3094 chr4 + 190214555 130011451 130011450 130011553 103 TTTATATATATTTATATATATTTTTATATATATT-TATATATTTATATATATTTATATATAAATATATATAAATATATATATATATATATATTTTTTTTTTTTT chr4 + 94230402 23063110 23063109 23063213 23063110 23063109 23063213 104 TTTGCATCTATTGAGATTTCTTTCTGCTTTTGTCATAAGCCCTTGTGCAAGAATACTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTT ...::..x....x.x..x.x...:.::x.x.:.:-..x::x:..:.::.x:xx..:x.:...x........x......:.:.:.:.:.:............... 34M1I69M 66/103 64.1% 104/94230402 0.0% 1/103 1.0% 106948341 83266214 +6814 chr4 + 190214555 130012434 130012433 130012604 171 TAAGCCCACCATCTATTCATCTAAGATCCTGTGGGCACTTAACTTAA-AATTGTAGAGATTATGCCTAATAACCTACTTGTATGCTCAGCTTACGTGC--TATAGATTATAGGGGTTCTGTGGGTAGTTCTCTAGAAGTGTTATCTATGGCTGCCTTTTATCTGAATGTATTAT chr4 + 94230402 26891693 26891692 26891864 26891693 26891692 26891864 172 TGAACCCTGCTTCCAATCATCCAAGAGCTTGCAGACACTTAACAAAGCAGTTGCAGTGTTCATGCCTAATAGCCTGCTTCTATGCTCA--TTGGGTGCAATATAGATTATATGAGTTCAATGAAGGGTTCTTTATGTGGGTTATCTCAGACTCTCTTTTGTCTGGATTTATTAT .:.:...xx.x..:.x.....:....x.:..::.:........xx.:-.:...:..x.x.:..........:...:...x........--..:x....--...........x.:....x:..::x:.....:..x:x.x.......xx.:..x:.....:....:..x...... 47M1I40M2D8M2I74M 122/169 72.2% 172/94230402 0.0% 5/169 3.0% 103120741 87093814 +3864 chr4 + 190214555 130014339 130014338 130014422 84 TCCGGACATATTATGTCTAGCTGTATTGTGCAGAAGTCCATAAAGTACTAGATAACTACTTTACTTCTAAGATATATATACCCC chr4 + 94230402 26891851 26891850 26891934 26891851 26891850 26891934 84 TCTGGATTTATTATGTCTGGCAGTGGTGTGCATAAACCCAAGCTGTAAAAGATGACTGCTGTACTTCTTAGATATATGTCTCTC ..:...:x..........:..x..:x......x..::...x:xx...xx....:...:..x.......x........:.x:.:. 84M 60/84 71.4% 84/94230402 0.0% 0/84 0.0% 103122488 87092067 +3062 chr4 + 190214555 130034724 130034723 130034790 67 TCCATCTAAAAATATATATATATATATATATAATGTATATATGTGTATATATATATTTCTTTTAACT chr4 + 94230402 83343388 83343387 83343454 83343388 83343387 83343454 67 TCTATTAACAATTGTATATACATCTTAATATATTGTGTACATGTGTATCTATATATTCATGTTAATT ..:..:x.x..x.:......:..x.xx.....x...:..:........x........:x.x....:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 46691336 NA +19015 chr4 + 190214555 130035027 130035026 130035605 579 TATCCCATATCTAAGTATTTATACAGATGTTAAACATTAGGTTTTTCATTATGTTGATTGATTCCAGTCATCTTAAGAATATTTCTCTCCTTAGATGTCAGCACAATGGGTTTTTTGAAAGCTGTTGTTTTGAGTGATGATCATTAAAGAAAGGAATATGACATTTCTAGGAGAATTTTAGCATTTATGTAAAATATAACAGTAGCTTATGGAGGTGG---------AGAGAAATGTATAATAACTTCAAGCATATGAAATCCTTAGAAGAA---GTTCTTGAATATGTGATCATGGGAAAAAAACCTAGATAAAGACAGATCTTTTCAGGGTATTTTATATATTTAAGGAAAAAAAAAGACTTTTTTTTTTAATGCTGCT-ATAGTCCTCAGGATGCAGTGAAGGTCACTGCAGTAAAAAATGTCTCTGTTGATTTAGATAAATGTGGCCTCATTCCAATATATTCTGGTTTTTCTTTTATCCAATTGAAAACCTACTGGAGGTTTTTACTGT-GGCTGTCAGACAGAGCACAAATATTTCATAAACCATACTGGGCTTATTAAGTTGGCAGCAATTTTAGCCTTCAGGGCA chr4 + 94230402 26898715 26898714 26899272 26898715 26898714 26899272 558 TAGTCCACTTCTGAGTACTTGTGCTGATGTTTAACACTGGTCCTTCCGTTTTGTTGCTTGATTCTGGTCAT---AAGGATAATCATTTCAGTTAGTGTCATTGCAAAGAGACATTGGAAAGCTATCATTCTGAGGGATGTTCACTGCTGGA-GGAATATGACGTTTCTGGGAGGCTGTCAGGGCTTTCATGAATTGTTA----AGATTATTTAGGTGGCTGTGCTGCAGATAAATGTACATTAACTTGAAATATGGGGAATATCTATAATAAAGAGTTTTAGTTTATTTGATCA--GGGAGAAAACCTAGATAAAGAAAACCCCT----GGGTGTTTTA----------------AAAA-----TGTTCCTTAGTGCTTTTTATACTCCTCAAGATGCAGTGAAGGTCAATGCAGTAGGAAATGTCTCCATTGATTTAGATAAACGGTACCTCTTTGCAATGCATTCCATTTTCTCCTTTATCCACTCGAAGAGCTACCATAATACTTTACCTTAGGCTTTCAGGCGATGTGCAAATTGTTCATAACCCCTGGTGAGGTTATTAGGTTGGCATATCTCTTGCCCTTTAGGGCA ..x:...:x...:....:..:.:.x......x....:.:.x::..:.:..x.....x.......::.....---...:...x.:x.:..xx.x::.....x::...x.:.x:x..x.......:.::..:....x....x...:.:xx.:.-..........:.....:....:x.x.:..x::..x::.:..x.:.x.----..x....xx......---------...x.......:.x......x..::..:x.:...x::..x..x..---...:.x.xx...x......--..:.:................x.:x:.:.----....:.....----------------....-----.x..::...:....x:.-...x......:................x.......::.........::..............:.xx:....x..x....::....::x...:..:........x.:...:.x....::x.:xx:.....:x.-....x....:.::x.::.....xx.......x..x.:x..:.x......:.......xxxx.:..:x....:...... 71M3D77M1D47M4D15M9I45M3I19M2D29M4D10M16D4M5D17M1I132M1I78M 384/544 70.6% 558/94230402 0.0% 49/544 9.0% 103136312 87078243 +10660 chr4 + 190214555 130053734 130053733 130054193 460 TGGACATGTATGAGCTTTGTATATTTCTCCCCTGTGTTGTCAAATACAAACCAAACTA--------TTCAGGACACATT----GCACCTCCCACTTCCTTCAATGACTGCA-ATTGAGAAGAACAGATGAAAGCTGTCTATGAGGCGTGTATGC--CTTTCTGTGTTTCCTCTGCTCTTTGTTTCCAGTGTTTCTCTTCAAACAGCTCACAGTCCATAGTCAGCACAGAGGTCGCATGCACAGTGGGGG--TTGACTTCAAG--TTCCTTTTACCTTTTGCAACTATATTGCTGACTGTGCATTTTTAAAAAGGTCTT---AAATTGGTA--ACTGACAAAGT-TATATATAAAATAGTAAGACTTTGAT-GTTCTTGTTTTC-TTCCTTCTAAAGTATGCAGTGGCAGTGAAAGATTGGGTAGACTGAGTAACCTTCCCAAGGGTAACTT-----------TTATTAGGAACCAAATGAGTCCTGCCTTCCACAGAT chr4 + 94230402 26902931 26902930 26903396 26902931 26902930 26903396 466 TGGCCATTTGTGCCCTTTGTGAGTTTCC----------GTTAAAAACATAGCAGGTTACAGCCTATTTGTAAACGCATTAACTGCATTTCCTTCTGTCTTCAAAGGTTACAGATTTGGAAAAGAAGATGAAAGCTATTGTAAGGGAGTATTTGAGACTTTCAGTCCCGTCTTTG-TCCTTGTTTT---------------------TTACACTCCACAGGCAGCACAGTGGTAGAATGCGCAGTGGGATACCTGCTTTAAAGGACTCATTTTCCCTTTAAAAGCTATGCTGCTGACAGTGCATTTTTAAAAAGGTCTTTAAAAACTTGAACTAGTGAGAAGGTCTATATACTAAATACAAAGACTTTGATGGTTTTTGTTTTCTTTCCCTCTGAAATTTTCAATGAGGTTGAAAGGTCCTGTGAATTGAATGACCTATCCAGCAATTGCTTTTGTCAATATGTTATAAGGATTTGAAAGATTCTTGCTTCCAGTAGAT ...x...x.:..xx......:x:....:----------..:...x...x.x..:::..--------..xx::..:....----...::...:x..x:......x.::.:..-...x:...:.:x...........:.:xxx::..x..:.x..x--.....x..x::x:..:..-..:......:---------------------.:...x....:..x........x...x.x....:.......:x--:..x:..x...--:..x....x.....x:x.:....::.......x.....................---...:.x.x.--.x...x..:..-......:x.....xx...........-...:........-....:...:..:.x.x..:..:x:x......:.:xx..::.:...:.:....x:...:x::.x:...-----------....x....x:::..x..x..:...:.:.x::.... 28M10D20M8I13M4I28M1I42M2I18M1D10M21D43M2I11M2I54M3I9M2I11M1I26M1I12M1I67M11I36M 297/428 69.4% 466/94230402 0.0% 70/428 16.4% 103150803 87063752 +8778 chr4 + 190214555 130073172 130073171 130073461 290 TTAAATGTCAGCCAACTCTGACTTCTTAGA-----ATTATGTTATCTGAAAAAAAAA--------CAGTAGGAAAA---TACGACAGGTGGATATG------------------------TGTTGGGGATTAAAGTACACTGGGGACTGAAATGAACCTACCAATCTCATTAGCTGTCTTCTGACCTGCTGAATTC--------TACCTAGGTCCCCTAGGTGAAAGGCTAATAATTAACTCAATTTGCTATCTGTGCTGGGGAAAGCTCCAAAGGTTAAGATTATGAAGGACTGATGAGGGCAATCTTTTATACTGTTTAAATTGCTGTTTAAATTT chr4 + 94230402 26906760 26906759 26907089 26906760 26906759 26907089 330 ttAGATGTCAAATGTTCTTGACCACTTGGATTTTCATTTTGATTTTGGAAAGAACAAAATGAAGGCAACAAGAAAAATGTAGGGAAGGTTGAGATGGGAGTGGTGGCAGATAGTGGTGAGTGAGAGGAGTTACAGCACAACAGAGACTGAAAATAGGCTGCCAGTTTTATTAGCTATCTTCTGAACTATTGAATTGCACTTTTGTACCCAGGTCTCTGAGGTGACAGGCTAATAATTATTTTGATTCACTGTCTATTCTTTTGAAAACTCCAGAGGTTAAAACTAT-------TGATGATGGCAATCTCTT-TAATCTTTAAAGTCCTATTTGTATCT ...:......:x::x:::....:x...:..-----...x..x.x.:x....:..x..--------..::.:.....---..x.:x....x..x...------------------------..xx:..::...x..:...x::.:........xx.:x..:...:.:.:.......:........x..::......x--------....:.....:.:x......x.............x:.::...::..:...:.x..xxx....:.....:.......:.:...-------......x........:..-..x.x......x.x..:...:x..:. 30M5I22M8I11M3I17M24I76M8I82M7D18M1D26M 200/282 70.9% 330/94230402 0.0% 56/282 19.9% 103166412 87048143 +3200 chr4 + 190214555 130089264 130089263 130089339 76 TATTGACAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCGCTTTTTTCTTTCTTCCTTTCTTCCTCCAGT chr4 + 94230402 18642594 18642593 18642669 18642594 18642593 18642669 76 TAATCACAATTTGAAAAAAAAGAAAAAAAAAACAGAAAAACTCTCCTCTGCTTTTTTTCTTCTATATTTCCACAGT ..x.x....x.xx........:..........x.:......:...x::.x:..:...::.:..x.x..:.:x.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 111446670 78767885 +3131 chr4 + 190214555 130089281 130089280 130089321 41 AAAAAAAAAAAAAAAAAAAAAAACCCTCGCTTTTTTCTTTC chr4 + 94230402 52465133 52465132 52465173 52465133 52465132 52465173 41 AAAAAAAAAAAACAAAAAAAAAACCCTCACTTTTTTCCATC ............x...............:........:x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 77624148 NA +3254 chr4 + 190214555 130107456 130107455 130107510 55 AAATACTGTCTCTTAGTCTCTACTGAAAATACAAAAAAAAAAAACAAAAAAAAAA chr4 + 94230402 22436105 22436104 22436159 22436105 22436104 22436159 55 AAACTCTAGCCTTTTGTCTCCATGGAAAACATAAAAAAAAAAAACAAAAAAAAAA ...:x..:x.::..x.....:.:x.....:.:....................... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 107671351 82543204 +23968 chr4 + 190214555 130110504 130110503 130111260 757 TAACAAAGGATACAATTTCAAAAAATAAAGAATGGGGT----AATGTGGGAAATCAGGAGTTACACTAAACAAATATTTGGCAATATGTAGTTTTACAGGTTGAAGTAATATGC------------AAAAATCAGTATTATTACTACTTCTGTAAAATGGTTGAATAGTCATAAAGTATGCCTGTTTATGGTAGGAAAG----CCGTGTGCAATATAGGATTGAT-----GCTTGTAAAGAGACAAGAATAAGATGAGACAAGAATAAGATAAGACAATGAAACAGGTCCACAA-GCATGAGACAAAATATACTCCAGATTAAATAGGCTTGAAACACTAGAATGCACTAAGTGATTAAAATAATTAAAATGGAGCAATTGAGATGTAAAGATGAAGGTGAATGCTTTTAGTGAAAGCATTGTAGCATTCATTCTCCCAGTCGAGGATGCATAGCAGTCTCTGTCCTGAGAGAAAAGGAGCTAGATGCCAAGCTTTCACCCAGGGCTGCCTAGCAACTAGCTCTTCTAGGGAGGGCAGTGCATAAGTTAATCTCTTTGGTAAGCATTTGTAGCTATTAATTTAATTAGCAAAGGCACTGTAGCATGAATCATCCTGGTACAAGAG-AAAAATATTAATGAAGA-TCTGAAATTCTAACTTCAAATAGGCACATTGAAGACTG--TTCCCAAGTCATAGTGGGCTAGGGGAAA-CTTACTAAAGAAAAAAAAAGTAATGCAGAAAACTTTCTCCCTTGCAATCAGGTTCTGTGGGGTTTCTTGAAGAGA chr4 + 94230402 26913581 26913580 26914324 26913581 26913580 26914324 744 TAATAAAAGGTGTGACTTCCTAGA-TATGAACTGGAGTGCAGAATAAAAGGAAT---GAAGTAAAC-AAACAAATATTTGACAATGAACAGTTCAGTGGAT---AGTAAAACGTTGAGAAGAACTTAAACATCAGACTGAATAATACTGCAGCAATAGATGTAGATGTAGATGTGGCATGC-----TCTGGTGTGCAAGACCCTCACATGTGACTTAAAATAAATTTTGAGGTTGTAAACTGACAAGG--------------------GAGAAGAAATGAAAACAAGTCCATAGCTTATAAATCAAAATATACTCCAGATTAAACAGGCTTGCAGCATCAGAATGCACCAAGTGATGAAAATAATTAAAGGAAAGCAATTGAGATATAAAGACAGAGATGAATGCTCTTACTGAGAGCAGTGTAGCATTCATTCTCCTGGTGAAAGATGCATAGCAGCTTTTGTCCTCAGAGATAAGAACATAG-TGCTAAACCTCCAGTGAGAGCTGCCTAGCAACTAACTCATCCAGTGAGGGCAATGCAGAAGTTAATCTCTTTAGTAAGCAAATGTAGCTATTAATTTAATTAGTAAAGGCAGTGTACCATGCATCAATATGGCAAAGCAGTAAATTTTTTAACGAAGATTTTGAAATTCTAACCTTGACTGGGTACACTGGGGAGTGGCTTCCCTA-TTACAGCAGGACAGTCTAAATCTTATTAAAAGTAA-------ACTTCAGAATACTGTGCCCC--AAAATGGGACCCTATGAGAGCCTTTAATGAGA ...:...:.:.:::.:...xx.:.-..x::.x...:..----...:x::.:...---..:x..x..-.............:....:x::....:x:::.:.---.....x.:.:------------...x.....xx.x.x..x....x.x.:..x.x:xx.::..:xxx..:x:.:....-----.x....:x.x...----:.:::..::.:x..::..x:..-----.x.......xx......:--------------------..x....x.xx:.....:.....:.:-x:..:.:x.....................:.......x.:..::.........:.......x............:x::............:......:::..:........:...x...:....x.................::..x:.:............::.:......x.....x...:.xx...-...:..:.:.:..x:x..:...............:...x..:..x.......:....x..............:.......xx.....................:.......x....x....x....x:x...:.x.:x..-...xx.x....:.....-.:............:.::.x.:..:...:..::..x..--.....x.-.:.:..::..x:..xxx...-....:....::x..-------.x.x.....x...x.x:...--:x...x:.:::..:..:.:x:::..:.x.... 24M1D13M4I12M3D9M1D34M3D10M12I55M5D13M4I22M5I18M20D26M1I189M1D140M1I17M1I38M2I7M1D20M1I14M7D20M2D32M 507/713 71.1% 744/94230402 0.0% 75/713 10.5% 103196923 87017632 +3605 chr4 + 190214555 130121315 130121314 130121487 173 GGCAATTGAGCAGTGGCTCAGATTTCTGCTGTGGCTTCCTGGTGCCATAAATGTAAATAAAGATCT-TGTCTCTCTCTCTCTCTGTATGTATGTATACACACACACACACACACACACACACACACACACACATATACTTACATACACATATAAATATATGTGTATATATTTTT chr4 + 94230402 60831482 60831481 60831627 60831482 60831481 60831627 146 ggtggtcaatcagaggttcag------gctatgattcaacagttcc-----catacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATAC--------------ATTTATATG---GTCTGTGCGCATGTGTGTATATTTCT ..:::.::.x...x..:....------...:..::.:xx::..x..-----::..x...xxx....-...............x.....:.....:..:........:.....x:x:.x.:..--------------.:...:..:---:.x.:x::::......:.......:. 21M6D19M5D15M1I55M14D9M3D26M 98/145 67.6% 146/94230402 0.0% 29/145 20.0% 69289833 NA +3094 chr4 + 190214555 130121389 130121388 130121437 49 TCTCTCTCTGTATGTATGTATACACACACACACACACACACACACACAC chr4 + 94230402 43671845 43671844 43671893 43671845 43671844 43671893 49 TTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCAC .:.....x.x...::...........::..........x.....::... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 86449544 NA +3823 chr4 + 190214555 130122647 130122646 130122720 74 GTGCGCCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGTACCCAGGAGGCGGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x................:.::........x.xx.x...x.:....x......:..x:xx:..:..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 54089443 NA +3312 chr4 + 190214555 130125872 130125871 130125950 79 TTCCTTTTTAAATTTTCAATGAAA---AAAGGGGATGTAGTTTTTTCTGTTTGTTTGCCTTTTTTCTTTTTCTTTTTTTTTT chr4 + 94230402 34387682 34387681 34387763 34387682 34387681 34387763 82 TTCTTTATTGATTGTTGAAAGGAATAAAAATAGGTTATAATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTT ...:..x..:.x.x..x..x.:..---...x:..x.:..:...x.....:.xx...:.:...........::.......... 24M3I55M 58/79 73.4% 82/94230402 0.0% 3/79 3.8% 95738190 NA +3297 chr4 + 190214555 130137120 130137119 130137198 79 AACTGTGAGATATATATACGTGTGTGTATATATATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325479 27325478 27325556 27325479 27325478 27325556 78 AGCTGAGAGGAA-ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:...x...:x.-..:::::..xx......:.:x..x.:x.:x..............:.........::...:...... 12M1D66M 55/78 70.5% 78/94230402 0.0% 1/78 1.3% 102811641 87402914 +3356 chr4 + 190214555 130137135 130137134 130137207 73 ATACGTGTGTGTATATATATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 + 94230402 27325491 27325490 27325563 27325491 27325490 27325563 73 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ..:...:..xx.:....:.:x.:x.:x..x..:...........:.........:::..:......:x.x... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 102811644 87402911 +3877 chr4 + 190214555 130137152 130137151 130137233 82 TATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x:..x...:.x.................:.xx:....x::...:....:..x.....::.x...::.:.:.x...:... 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 44302619 NA +3008 chr4 + 190214555 130137156 130137155 130137230 75 TATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .....:...:.....::...x......::xxx.x..:...:xxx:...:.......:..:..:...x..:x:... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 90199981 NA +3735 chr4 + 190214555 130137158 130137157 130137237 80 TATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATAT----ATATATATACATACACATGTATATATATAAACATACACATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.....x.................:.xx..:.----...:....::.x.:......x...::.:.x.:.:....... 39M4I41M 60/80 75.0% 84/94230402 0.0% 4/80 5.0% 44302625 NA +3012 chr4 + 190214555 130137164 130137163 130137222 59 TATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATAT chr4 + 94230402 79265520 79265519 79265578 79265520 79265519 79265578 59 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .:..........::........xx........:...:.::.::::....:::x.:.... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 50871644 NA +3546 chr4 + 190214555 130137164 130137163 130137239 76 TATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACACATGTA chr4 + 94230402 85834533 85834532 85834608 85834533 85834532 85834608 76 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ...x::.x.....x.............:.:...xx..:..x:......:.....x...:..:xx:..:....::.. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 44302631 NA +3418 chr4 + 190214555 130137165 130137164 130137235 71 ATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACACA chr4 + 94230402 85834538 85834537 85834608 85834538 85834537 85834608 71 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..x.....x...................xx..:..x::.......:::.x:..:..:.x..x:..:...:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 44302627 NA +3285 chr4 + 190214555 130137166 130137165 130137235 70 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACACA chr4 + 94230402 79265520 79265519 79265589 79265520 79265519 79265589 70 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ............::........xx.:......:...:.::::.:....:.:.x.:....xx:::.x.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 50871646 NA +3477 chr4 + 190214555 130137173 130137172 130137222 50 GTGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATAT chr4 + 94230402 68837095 68837094 68837144 68837095 68837094 68837144 50 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT .....:.............:.:.:.x...:.............:.:.:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 61300078 NA +3170 chr4 + 190214555 130137176 130137175 130137251 76 TGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACACATGTATGATGGAATACT chr4 + 94230402 42936203 42936202 42936278 42936203 42936202 42936278 76 TATTTTTGGATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGCTGAAATACT .:.x.x..x:..::.:......:...:x........:...:.x:.:.::.x...x.:..:::....x..:...... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 87200973 NA +3829 chr4 + 190214555 130160888 130160887 130160970 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:...........:.........x.xx.x...x::........::.:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 54127691 NA +9923 chr4 + 190214555 130177975 130177974 130178475 501 AATTCATTTATTTCTCAAT-ATTATGATTTACTTACCACCTAATGTGTGACAGTTTTTTTAAAGGAA-GCTAAATGTTTCTT--------TAAATCTGATTCGAGAAGTTAGATTTG----TCTCTATTGAAGTTTTTCTTGACTTTCTATTGTCTATTC--------AAAGTTTTAAATACAAAAAACCCTTTTTATGCATCATCTTCAGAACTA---TTATTATCATTAGCAATTATATTTAAGACAATCTTCAGATCCCACTCTTTTCCATTTGTAACACAAATCCTACACACATCTTCCAAATCACCACCCTTGAGAGAATCTT----------CTGTAGCTCTGGCTGCCTCAAAGATATGCTGTTCCTTCCTCAGCATCACTTATGCTAACCAAACTATTAGCACCTGCTGAGCCTCCTCTCCATCAGTCATCAATCATCAGCAATCAGGCAGCTACTTGATAATTAGTTGAGAGAAGGAAAAACACTTCAAAGAACTAAAAATAC-TTTCCACAGTGACTTTGTGCATAA chr4 + 94230402 26930055 26930054 26930555 26930055 26930054 26930555 501 AATTAATTTATCTTTTAATTATTTGAAGTTATTTG-------------GATAGTTTTTTGATTGCACTGCAAAATATTTTTCCCTGAAACTGAATTCAATTTGTAGTATTTTGTTTGATTATTCCACTTCAAGTTCTTTTTCACCTT--ACCATATATTCTGCTACATGAAAGTTTAAATA-----AACAGTTTCCATAAGCAGAGATCACAAATAATTGTACTCTTTTTAGTAACAACACATCATAGAAATTGCAG---------TCTTCTGTTTGTAATACTAATCA-----ACACGTTCACA--CACTGCCATGGAGGAGTCCTTTCACAGGCAACAGCAGCACAGCCTGATGGAATTACAGCCACTTGGTTCCTCTGTGCCACTTGCATTTACCAAACCATTAACACCTGCTGAACCTTCTCCCCAACAGTCATCAATCATAAGCAATCAGCCAGGTACTTGATAATTAACAGAGAGGGAGGAAAACACTTCAAAAGTCTAAAAATATGTCTTTACCATTATTTAGTGCATAA ....x......:.:.:...-...xx:.x...:..:-------------..:........x.xx.x.x-..x....:...:.:--------.:...:::...:.x::x:..xx:....----.::.xx..x.....:..:..x..:..--.:::.x.....--------:..:x........-----...xx...::..:x::x:xxx...x..x..---x..:.x.:x....:..:x.:.:x.x.x.x..x:.x...---------.:...::.......:..x....x-----...:x...xx.--...::..x.x...:::x:...----------.x.:...x.x.x...x:xx..xx.:.xx.xx..xx......x.:::.....::::.x.......:....:..........:...:...:...x..............x.........x...x.............::x.....:::.:.............::x.........:-.:.::..x:.x.:..x........ 19M1I15M13D19M1I14M8I27M4I26M2D11M8I13M5D30M3I38M9D23M5D11M2D21M10I174M1I24M 310/465 66.7% 501/94230402 0.0% 72/465 15.5% 103247920 86966635 +6873 chr4 + 190214555 130179788 130179787 130180045 258 TGCAAATGGAAAGAA---AGCAGAAGCTTCAAGAATATATAAATGCATTTCACATGCATATTTCATGACTTTTTCTACTTTCCTGCAGTTATAACTTAATTGAGTAATTATTCTATTCTTTGCAAATGAACAGACTTTTGTCATTTTCTTTTGTGACCAGTAATTACTCTTT-TATTTATAAGTAAAC---GCAAAAATGCTGTGACAATAAAATAAAATAGTGAGGTGGGAGGAAAAAATGATGAGGAATAAACGATACCATAT chr4 + 94230402 26931733 26931732 26931973 26931733 26931732 26931973 241 TGCTGATGAAAACAGCAGAGTAGAAGCCTGGGAAATATACTGATCCCCCATCCATGCATATTTCATGAATTCACCGAATTTCCTGCAGTTATGACTTAATTAGGTAATTATTCCACCCTCTGTCACTGAATG-----------------TTAGTGACCAGTGAATATTCTTTCCATTACTATGTGAATATAACAAAATCAATGAAACAGTCaaaaataataataa------ataaataaataat-aataataaaaaaGGCCATAT ...x:...:...x.:---..:......:.x:::......:x:..x.x::x:x................x..:x:.x.x..............:........::..........:.::..:..:x.x....::-----------------..x.........:.x..:.....-:...xx..x..:..:---:.....x::x..x:...:.x...x.x....:.:.------.x:..x....:..-.:x......x:.x:...... 15M3I114M17D23M1I15M3I34M6D13M1D20M 162/234 69.2% 241/94230402 0.0% 31/234 13.2% 103248055 86966500 +3268 chr4 + 190214555 130203531 130203530 130203597 67 AAGAGCTTTGGCCCTTTGGGGAACCCAGTTCTGGGAGCTCCTGGAGCCAGGGCTGTGACTCCTTCTT chr4 + 94230402 21167727 21167726 21167793 21167727 21167726 21167793 67 AAGAGCTTTGTGGCTCTGGCGCTCCTTGCTGTGGGAGCTGCTGGGGCCAGGACTGGGGCTTCCTCTT ..........xxx..:...x.xx..:x.:.x........x....:......:...x.:..:.:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 109035804 81178751 +12799 chr4 + 190214555 130211613 130211612 130211894 282 TACTTGTTATAAATATGACAAATTCTTATTATTACATCAAAAAAGTTATATTTTAAATTACTCTTGACACATTTTAATGATGTTCTACATTGTTCTTAATGAAGGTCAGGCCCGTGAGATAATGTGCTATTATTGACTGAATTCTAGCTATTTTGTCTGAGATATACATTTGACAAGAATACTGCTTCAGAAGAAGCAATTCATTTACATAGAAAATGTTTTGCTATAAGCAAACCAAAGCATGTCTGCATCCAAATTTAGAAATGTGTTGGTGGATTGATA chr4 + 94230402 26949762 26949761 26950034 26949762 26949761 26950034 273 TACGTGTTATGAATATGAAAATCCCCTATTATTCTATCAAGAAAGTAACAATTTTAATTACTCTACACACAGTATAATGCTCTCCTGAATTGTTTCTAATGAAGGTTGGGTTTATGAGATAACATGCTATTACTGAATAGTTACTAGCTG-TTTATAAGCTTTATACATTTGACA--------GTTCAAGAAGAAGCAATTCATTTATACAAAAAATTATTTCCTACAAGCAAAGCAGACCATGCCCACAGCCATCTACAGAAGTGTTTTGGTGGACTGATA ...x......:.......x..x::.:.......x:.....:.....x.:.x...x.........xx.....x.x.....x.x.:..:x......::..........::..::::........::........:...x.::x.x......:-...:.xx.xxx.............--------.:.:x...................:.:.:.....xx...x...:.......x..:.x....:.::..x...xx.x:....:...x........:..... 150M1D24M8D99M 203/273 74.4% 273/94230402 0.0% 9/273 3.3% 103261851 86952704 +14042 chr4 + 190214555 130231944 130231943 130232439 496 TAAATGTCCTGCTATCATATGCCTTCAATTTATAGTGATACTAATTTTAATCAATA--TTTGAGGATCATTCATTGTTAAACTTTTAAAAAAT---TTTGAATTAAAGTT-TGAAGCAGTCCATGAATACAGACGTTTTGTCCT-----AAGACACTATTGTTAGTTAATTTAAAGTCCCTTCCTTCATCATTGCTAAGTGCTGTAGTCTGTCATCCATTCTCCAAATGAAATGTGACTTTGATGGATAAACTCAATTAAAGCTCAGGCATTAGATAAGTTCAACAGAGAATTGGGCTGATCTTTACCAATCTACCTTTAAACA-TACAATAAGTATTTCAAAATGAAGTAGTCATAAATTATACTGAAAATATATGCTAGTAAAATTAGGTTGAAATTGGAATCAATCACTCTATGTAAATTT-CTATTACTTAGAAAGCAACATTTATTTCCCTTCCCCTTGAG-TATTGTATCTTACATATGCTTTTAAGAC-----GTAAAGTAAGAGAAA chr4 + 94230402 26956572 26956571 26957083 26956572 26956571 26957083 512 TAACTGCCCTGCTGCAACCTATCACTGTTTCAT-GTTCTGCCACCTCTAAGAAATAGATCCAAACATCATTCACCACTCTATATCACAACAGTAAGCCTGAATCCAATTTATTAGACAGAACA--AATACAGCCTTAAACTCCTCTACAGAGATACTATTGTTAATTAAATCAAAGGCCTTTCCATATACAGTGCTAATGGTTCTAGCCCTGCATCCTTTCTCCAAACAGCATATGGCAGTGATGGATAAACTCAATTAAAGCTTGAGCATTAGGGAGATAATGTGGTGAGCTGAAATGATCTTTACCAATCCACCTTTAAAAACTGCAATAAATATTTCAAAATGAAATGTTCGTAAATTATGCTGAGGATACTTATTAGTGAGTTTGGATGGTAATTCAATTCAACTATTCTAAGTTAGTTTGATTGTGGTTAGACAATGGCATTTACTTTCTCTCCAATTATGCTACAGTATTTTACAGATGGATTAAAAACTGAGTGTAAAGAGAGcaaaa ...x..:......::x.:x.::.x:::x..:..-..xx.:.:.x:.:...xx....--.:::.:x........::::.xx.:x.:xx..x.:.---::.....:x..x..-.x.::...xx..--.......x.x.xxxx....-----:...:..........:....x.:....x..:....x.xxx..x......xx.:.x...:.:xx.....x.........:::x..:..:.xx........................:::.......:x.::.xxx:::.x..::..::x...............:.........x.-.:......:..............:.:x..:........:....::...:x.::....:.:x..:.:.x.x....x:.x....::.:....x..x.:...-x.xx.:x.....x.::::......:..:.::...xx..:x.-..:x....:.....x...xx..x..:..-----......x:..x:... 33M1D22M2I35M3I14M1I12M2D19M5I175M1I99M1I41M1I28M5I15M 326/493 66.1% 512/94230402 0.0% 22/493 4.5% 103275372 86939183 +3144 chr4 + 190214555 130248688 130248687 130248750 63 ACATATATTTGATGTATGCATTTGAGTGAGGTTTTGTGTGTGTGTGTATGTATATGTGTGTAC chr4 + 94230402 3844077 3844076 3844139 3844077 3844076 3844139 63 ACAAATATTTAAAGCATGCACGTGAGTGCGGTTGTGTGCGTGCGTGTGTGCACACACGCACAC ...x......:.x.:.....:x......x....x....:...:....:..:.:.:::.:::.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 126404611 63809944 +6567 chr4 + 190214555 130251453 130251452 130251744 292 AAATTTATAAGCAACTAACGTAGTT--------TATTACTAACATGTC--ATAGACATCATTTTTTAA-AGGATTATG-AAGGGATTAAAGATAAA--CATTGGGTTAAAGCA------------TTACACTAAAAATGTGAAGTGCATTACCATTTGAA--------GTACACTTATCTTTTCTCCAAT-TCCTTGTACTTCAACAATCAGAAGGTCTTAAATATACATGATGACACTCAA--AAATGCATTTATAATTTAAATTAACACAATCAGAACTTGAATTGGCAAATATTCCATTTTCTTTTTAAGAAATTTTAATTAATAA chr4 + 94230402 26961132 26961131 26961459 26961132 26961131 26961459 328 AAATTCTAAAACAATCAAAGAAGTGAAACAGAGTAATATTGATATTTTGTATAGTCATTGTGCATAAAGAAGATTATGTAATGAATAAAAGATAAATGCTTTCAGGAAAAGAAAAAAAAAAAGATTTACATGAAAACTG-GAAACCTATTAACATATGAAAGTTATCAGTTCATATACTCTGTGCCTAATGTGCTTGAAGCATGATTGTCTAAAAGACTTAAAAATACATGATCACTCCAAAGAAAAAGCATTTATAATTTAAATTAACATAATCAGTGCTTGTCCCTGTAAGTAGTCGATTTTGCATTTAAGTAATTTTAATTATTAA .....:xx..:...::..x.x...x--------..x..:.:.:..x.:--....x...::.x:x.x..-.:.......-..x.:..x.........--.x..x:.xx....x.------------.....:x....x..-...::x:....x...x....--------..x..:x..:::.x.x:.:...-.x....x.x:x::.:x:..x:..:.x......x.........x..x.:x..--...x......................:......x:....xx::x.:..:..x..x.....x:x......x...........x... 25M8I15M2I18M1I9M1I17M2I15M12I14M1D20M8I22M1I51M2I85M 203/291 69.8% 328/94230402 0.0% 38/291 13.1% 103290321 86924234 +3061 chr4 + 190214555 130269599 130269598 130269665 67 AGTGTTTTCAGAAGCTAGTTTGTTTTCTTATTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 69642657 69642656 69642723 69642657 69642656 69642723 67 AATACTTTTAGAAACTGCCTTTTTTTGTTGTTGTTTTGCTTTTTTTTTTTATTTTCCCCATTTTAAG .:.::...:....:..:x:..x....x..:..x....x............x....::::x....:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 60626942 NA +3424 chr4 + 190214555 130270790 130270789 130270855 66 TTTCTGCTTAGATATTCTTTTGTAATTTACGTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTGCT chr4 + 94230402 34894941 34894940 34895006 34894941 34894940 34895006 66 TTTCTGGTTTGGTATTTTTCTACATTTCATGGGTTTGTTTTTTGTTGTTTTTTTTTTTTTTTTACT ......x..x.:....:..:.::.x..:.:.x...x.x.....x..x................:.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 95375849 NA +21004 chr4 + 190214555 130277584 130277583 130278080 497 AAAGAAATCATTGT--ATGAATTACGACTGAGCACTAATAAAAAAA-TTGCTTCATAAAATATAGGTTCTACATCTTCTATAAGGATAGAGAAGTGAACCTTGTAGCTGTGGATGAGCTAC--AAGAT-TATAAATGCAATTTAAATTGCAAATGTAAACTATCAGAAGAAAACACTTGTAAGTTTTCAACCAGGCATCCACTGATTTTTAACCGAATCAATAAATTCTAGCAGGACAATGAATTTGCACCACTCAATCAAAACAAATAAGGACTATCTTCTTCTTATCATAAAAGCAATAAAAACCGCTTGCACAGCATTCTTCCCTTAATTTGTCTTTCACTCTGCACGATAAAGATAACTAAGTGCTCCATTTCGGAAGAACATATTGTTTCACTATGTATATTTTTCATCACTGAAGTCTAGAGAGTATTGTTTTTTAATTTGTTGATTGAGTCCATCAATTCGAATTAGTCTAAATGTTGTGGGAGGATAATGACAAT chr4 + 94230402 26972845 26972844 26973319 26972845 26972844 26973319 475 AAAAAAATCATCAGTAATGAATT------------TAACAAAAAAAGTTGTTT-----GACACTGGAATTATATTTTCTGAA------GAGACATGTGCCTACAAGTTGAGGATTAGTTATTTAAGCTGTCTTAACACAATTTAAATTGCAAATGTAAACTATCAGAAGGAAACACCCGTACGTGTTAAATCAGGCAACTACTGATTTTCAACCAAATCAATAATTTGTAACAGGACCAT-AATTTGTACCATCCAATC-AAACAAGCAAGGACTATCTTCTTATTATCATAAAAGCAATGAAAA-GACTTGCACAGTATTCTTTCCCTAATTTGTCTTTCATTCTGCACCATAAAGATAACAAAGTATGGTATACTCTTAGAACATATTGTTTTACTC--TCTGTTTTTCATCACTGTAGTCTGCAGTATATAAGGTTTTAATTTGCTGATGGAAACCATCAATTAGAAGCAGAAAGGGGGCTGTGGGAGGATAACAGCAAT ...:.......::x--.......------------...:.......-...:..-----:.:.:x..xx:..:..:....:x.------....x:..x:...xxx..:..x....x..:..:--...x.-.x.x..::................................:......::...x..x..x..:......x.:.........:....:.........x..x..:......x..-......:....::.....-......::...............x................:....-x:.........:......:..:..............:.......x...........x....::xx:..x::xxx..............:...x--.x.:.............x.....:x..x:...x:xx..........:....x..:x.........x...x:..xxx:::x.:.............:::.... 14M2I7M12D11M1I6M5D24M6D33M2I5M1I111M1D18M1D45M1D93M2D102M 363/469 77.4% 475/94230402 0.0% 34/469 7.2% 103304739 86909816 +14479 chr4 + 190214555 130279318 130279317 130279827 510 TTTAAAATTATCAAAAGAATAAAAATGTCTATTTCAACCCAGTATAGCAGTATAATTAAGTCAGTCAGATTGAATTAAAAGAGCTATATTAACATAAAGCTTTTCCTGCCATCCTCT-----GTAAGTCTGAGATTTTTAATTAATGTTTAAAGTGTGGTTTGCTTGTAGTTGATATTTTATTTACAGCTATAAACAAAATACGTTATATTCTGGTAATTTGAATATTTTCCCCATGAAAGATTCTTTTGGCCTT----AAA--ATGGTAGAAAATGAATACAAATATAA--------TTTAGCTCTTTTGTAATTAAAATAAATGTTTCCCTTTCTTGTTACTTTACTTTTAAGTAAATAAAAACTTAATATACCATAAACTCA----AAGAACTGGGGTATTAATTGTCTTTAAAATAAAGTTCAGAAATTATGAAGTCTGAAATAAATGGT--TTCCA-----------ATTTCCCAAGCATCCCATTTGATACTTGAG-AGCCATTCG--ATATCATAGTCATAA-TAAATTATGAATAAAATCAT chr4 + 94230402 26973876 26973875 26974395 26973876 26973875 26974395 520 TTCAAAGGCtttaaaaaaaaaa-------tattttaaatCA---------TGTAATTAAGTCAGCCAGAATGAATTAAAACATTCAGATCAACATAGAGCCCTTTCTGCCATCCACTCTACAATAGGTATGTAATTTCTAATTAATGTTTAAAACGCAGTTCACTTGTACTTGATATTTAATTTATAGTTATAAGCAGAGCATATAATCTAATAGTAATATGAATGATTTCTCCATGAAAGAATCT----GCCTTTTGGAAATTACAGGAGAAAGGAAATACAAACACAAGCATTTCTTTGTTCTTTTTTGTAATACAAAGAAATATTTCTGTGCC----------ACCTTTAGCTAAATTAAAATTTCATAGGGGATGAAAGCAGCAGAATAATTGAGACAATAATGTTTTTTAAATCAAAACTTGCAAAACACGAAGTCTGAAATATGTGGTAATTTCACACAGGGTGACAGTTTCTGAGCCTTACCTTTGAAATCTGAGTAGGTAACAGTAATACCAAAACCCTGATTTAATGATGAAGAAAATGAT ..:...:x:x.:....:..x..-------.....:..x:..---------.:............:....x..........x.x::.x..:......:...::..:.........x..-----:..:..x..x:....:...............::.::...::......x.........x.....:..:.....:..:.::.::.x..x.xx.:.....x.....:x....:..........x...----.....----...--.::.x.....:x:........:.:..--------..xxx..:.........xx...x....:....:x.x:.----------..:....:x.....x....:..x...x:xx..:..xx..----..x..:..:.::.x....xx.:......x:...::.::x...x:.:.............x:....--..:..-----------.x..:.::...x.:x.x.....x.::....-..x:.x:x.--...:..x.::.x.:.-.x...x.....x.....x.. 22M7D12M9D67M5I124M4D5M4I3M2I26M8I38M10D39M4I65M2I5M11I30M1I9M2I15M1I20M 342/480 71.2% 520/94230402 0.0% 70/480 14.6% 103305442 86909113 +10864 chr4 + 190214555 130288670 130288669 130288938 269 AGAGATTTTT----GATGAAACATTAGTTATTTCCTCCTGTC---------TG-GCAGCTCAAGTTACAAGCAGAACG-CTTAGATTGGCACACTTCTCTTTCCTTCCCTTGTTCTCATTAGCAGGGAGTCTT-AATCTCCTCTTTCTCTGCCTTTCTGAGTAATCACAGTATATCACTATCCCAGTGGGATCTAAACAAAGATTGAGTAGAAAATTAGTATCACAACCAAGTAGGTTTAAGGTCAAAATAA---TGAAAAATCAATATAACATACAAA--GAGGCATTT chr4 + 94230402 26981741 26981740 26982027 26981741 26981740 26982027 287 AAAAATTTTTCTGTGATGAAGAATTGTTTGTTTCCTATTGTTATTCATTGTTGTGCAGTTCAGTTTAGAGGTAATACAATTTAGATTGGCACATCTCTTTCTT-TTCTCTTCTACTCATTAGCAGGGAGTCTTTAATCTCTTCTCTCTCAGCTTTCCCTAATAATCACAATATCTCACTTTCCCAGTGGGATTCGGTCTAAGATTGAGTAGAAAATTAGACTCAC-ATCAGGCAGG-CTGAGCTTATAATAATGCTGAAGAAGTAATATAACATAAAAAATGAAACATTT .:.:......----......:x...:x..:......x:...:---------..-....:...:x...x.:.:.:x..:-:.............::...:.:.:-...:...x.x...................-......:...:....x..:..:.:x.:........:...x.....x............::::x.x....................xx....-.:..:.:...-:.:..x.:.x.....---....:..x:...........x...--..::..... 10M4I28M9I2M1I24M1I24M1D29M1I91M1D10M1D15M3I24M2I9M 205/266 77.1% 287/94230402 0.0% 24/266 9.0% 103306929 86907626 +3175 chr4 + 190214555 130295999 130295998 130296088 90 CTGCCCTGCCTTCCCTTCCCCT-------------------CCCCTCCCCTCTCCTGT---CCTCTCCTTTCTCCTCTTTTCTTTTCTCTTTTCTTATCTTTTTTTTCTTCT chr4 + 94230402 10881557 10881556 10881668 10881557 10881556 10881668 112 CTGCTCCTCCTCCCTTTCCCTCTGAATTCAGGTACCGATAGCTTCTGTTATCTCATGTGTTTCTCTCATTTCTCCCATTTTATTTTCTGTGCTCTTTTTTTTTTTTTCTTCT ....:.:x...:..:.....::-------------------.::..x::x....x...---:.....x.......:x....x......x.x:....x.:............. 22M19I17M3I51M 66/90 73.3% 112/94230402 0.0% 22/90 24.4% 119414442 70800113 +3055 chr4 + 190214555 130312811 130312810 130312906 96 AAAAAGAGTGAAACTCCTTCTAACAAAAAAAAATAATAAAATAAAAAAAAGAAAAAGATTTTCAAACAGTTGAAATAACTACTATTGGTATTGATT chr4 + 94230402 70253188 70253187 70253269 70253188 70253187 70253269 82 AACAAAATTAAAACTGATCTTAATGAAAGGAATTATTAAAAAAAGAAAAAAAAAAGGGTTTTCAAGGAG--------------GTTGGCATTAATT ..x..:.x.:.....xx.::...::...::..x..x.....x..:.....:....:.:.......:x..--------------:....:...:... 69M14D13M 58/82 70.7% 82/94230402 0.0% 14/82 17.1% 60059623 NA +3313 chr4 + 190214555 130317656 130317655 130317792 137 GAAGAGAAATGAAGGCTGGAGA---ATAAGCTTTGGAATATGAATAACAGTTACAAAATAAAATAATATGTATTTAAGATGACTTAGTAATGCTT--GCTCATATAAATTG-TGTATAACAATAACGCATGACTGATTTTTTT chr4 + 94230402 58347574 58347573 58347713 58347574 58347573 58347713 140 GAAAAAGAATGAAGGGGAGAGAGAAATAAAAT---AAATAGGGAAGATGGTTACAAAAGAAAATAATATGTTTTTAAATCAAATTGTTAATGCATAAGATTATATGAGTAGAAGAAGTACTATTTTGCTTTGCTGACTTTCTT ...:.::........xx:....---....:x.---:....x.:.x:.::.........x............x.....:x::.x..:x......x.--.x.:....:.:.x.-x.x.xx..x..xx:..x.x:....:...:.. 22M3I7M3D60M2I14M1I31M 91/134 67.9% 140/94230402 0.0% 9/134 6.7% 71970082 NA +3602 chr4 + 190214555 130331264 130331263 130331354 91 ATAATAAATACCGTATATAT-TATATATGTATTATAATATAAATATGTGTGTGCATGCATGTGTGCGTGTGTGTGTGTATACATATACTGTA chr4 + 94230402 32744947 32744946 32745036 32744947 32744946 32745036 90 ACAATGTACACC-TATCTATCTATACATCTAC-AGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATATTCTGTA .:...:x.:...-...x...-....:..x..:-.x..........::.:::.:..::..x......:.......:.....::....x..... 12M1D7M1I11M1D59M 66/89 74.2% 90/94230402 0.0% 3/89 3.4% 97586317 92628238 +3505 chr4 + 190214555 130350120 130350119 130350200 81 TCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCTTTCCTTCCTTCTTCCTTCCTTCCCTCCCTCCCTC chr4 + 94230402 57538430 57538429 57538510 57538430 57538429 57538510 81 TCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ..::.:..xx:..x:.x.::.::..:.:..x....:........:..x.:x..:::........:x............::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 72811690 NA +15267 chr4 + 190214555 130359716 130359715 130360027 312 TAAGTAGAAAGTCACTGTCAGAAGGTGGCAGTGTAGTACTTTCCTTCC-----CAAATGAACGAAAATAGTTTAAAAATTACCAAAATGTAGCCTTTTCCAGATGCAGGCCTCAGGGCCACATTCAGTCCTGCAACTCTCTCCTCATTGCTGGGGATGTCTCATTAGGAGATTAACTGTTTAAAATGCAATGCTAATGTGAAAGTTTTAATTGGGAAATTCTGTGCATGTTAAATTAATCTTTCTTAGGTACTTTTATCTAGAATTCGTGTTTCTTTTCTACAATGTTTAGCCTTTCTGAATGCTGCACATTATTTC chr4 + 94230402 27004990 27004989 27005301 27004990 27004989 27005301 312 TGGGAAAAGAAATATTGACAGTAGGTGGCAGTGCAGCCTTTTCTTTGCAGTGTTGGACTCAGCAGCATAAATCCAGCCTTTACAGAGTACAGCCTTTTCCAGATGCAGGCCTCAGGGCCGTATTCAGTCCTGCAATTCACTTCTCATTGCTGGG-ATGTCTCATTAGGAGATTAACTATTTGAAATGCAGTGCTAATGTGAAAGTTTTAATTGGGAAATCCTGTGCATGTTAAATTAA----TCTTAAGTACTTTTATCTTGAATGCCTGCTTCCTTTACGTGCTGCTCCGTATTTTAAACCACCTCACGTTCTTCC .::.x.:.:.:x:.:..x...x...........:..:x:....:..x.-----:::.:xx.xx.:x...:x.:x.:xx..xx..:.:.::.............................::..............:..x..:............-......................:...:.......:.............................:..................----.....:............x....x.x..:...:...x::::x..:.:x.:x...:x:.x::.:x...:..x..:. 48M5I101M1D83M4D75M 230/307 74.9% 312/94230402 0.0% 10/307 3.3% 103354726 86859829 +25590 chr4 + 190214555 130369377 130369376 130369869 493 CTATATCTCAAGGTGGAAATTTAGATGTCCTTTTACATTTTCTCTTTATTTATGTCATCACATTAATGTATAAGCTCTTCTAGTAGTTTTAAATGACTCTG-CATTGCTGCATTGTTATTTTGTATTGAGTCAAATTAATCACACTTGAACAACTTTTAAAAA----CTTTGCCTCAAGAGGTGTCAAACTATTAAATATTTT-CTATTATAAGGACTGAGAATTGTTCACTGAAGAGAATAAAGTACCACTTTTGCATATATTACACAAACATTTTATGCTTCATGAAACCACAATAAATTTTCTTGCTGATTACTCATGTAATCTAAGAATCTCCTGCTGTTTTAT--AGAGTCTTATTAATTTCATTCAAGTAGTAAAATTAGCACCTGTAGAGAACTCCTTATGATTTCCTAACTTTTATCATATTAGTAATAACCTACTTCATTTATCATGGAACAGCTG----CTTTTGTCTCCTTATCTATTTAGCTTTGGTGTTCTT chr4 + 94230402 27009381 27009380 27009881 27009381 27009380 27009881 501 CTGGATATCAAGTTGGATTTTCAGTTGTCTCTATACACTTTGTATAGTCTTAAATAGTTATCTTG--GCAATAGTTCCTATTGAAGGTTTAAATAAAGTGGTCCTTCTTTCACTGCTAGTTTGTCATGAATCAAATTAATTACACTTGAACAACTTTAAAAAAAAACCTATTCCTCAGGAGTTTTCAAACTATTAAATATTTTTCTATTATAAGGACTCAGAATTGTTCATTGCGGAGAATAAAGTACCACTTTTGCATACATTACACAAACATTTCATGCTTCACGATTCCACAGTAAATTTTCTTGCTGATTACTC--GTAATCTAAGAATCTCCTGCTGTTTTATGGAGAGTCTTATTAATTTCATTCAAGTAGCAAAATTAACACCTGTAGAGAGCCCTTCATGATTTTTAAACTTTTATCTTATTTCTAATAACCTACTCCATTCATTGTGTAATAGCTGGTTTATTTTACCTCTGAATCTATTGATTCTCAAGGTTTTT ..:x..x.....x....xx..:..x....::.x....:...x.x.xxx:...x:.x:.:.:x..:--.:.xx..:..:.x.x.x..x.......:.xx:x.-.x..x:.x..:..:..x.....xx...:..........:................x.....----..x.x.....:...x.x...................-..............x...........:..x:.........................:...............:........:..xx.....:......................--............................--...........................:.......:............:.:.:.:.......::x..........x....xx............:....:..::..x..:.....----x....::...:xx.......x.x::.:::x...:.. 65M2D34M1I61M4I36M1I114M2D28M2I115M4I36M 389/489 79.6% 501/94230402 0.0% 16/489 3.3% 103359996 86854559 +3150 chr4 + 190214555 130384792 130384791 130384854 63 CATTCTGTTGATTTTGTTTTGTTTTTGTTTTGTGTGTGTATGTGTGCAGGAGCTTTTTAGTTT chr4 + 94230402 84631333 84631332 84631395 84631333 84631332 84631395 63 CACTTTGTCTTTTTTGTTTTATTTTAATTTTGTGTGTGTGTGTGTGTATACTCATTTTGATTT ..:.:...:xx.........:....x:............:......:.x:xx.x....::... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 45753459 NA +3575 chr4 + 190214555 130385762 130385761 130385839 78 GGAGACAGAGTGAGACTCCGGTCTCAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATACATATATATATGTAT chr4 + 94230402 1494978 1494977 1495052 1494978 1494977 1495052 75 GAAGCCACATGGAGATTCAGGG---AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT .:..x..x.xx....:..x..x---...x.:.........x.:...............:.:......:.....x:... 22M3D53M 58/75 77.3% 75/94230402 0.0% 3/75 4.0% 128890784 61323771 +3214 chr4 + 190214555 130385783 130385782 130385843 61 TCTCAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATACATATATATATGTATATCA chr4 + 94230402 85548415 85548414 85548475 85548415 85548414 85548475 61 TCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCA ...:x.............:.:xx.x.x:...:.:.:.::..............x....... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 44837368 NA +3271 chr4 + 190214555 130385786 130385785 130385838 53 CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATACATATATATATGTA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:......x.x......:.:..:.........x.....:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 128890783 61323772 +3273 chr4 + 190214555 130395046 130395045 130395123 78 GTGACACACGCCTGTAATCTCAGCTATTTGAGAGGCTGAGGCACGAGAATCCCTTGAACCCGGGAG-GCGGGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:::....--....:.::......:....:........x.x:.x...x.x.........:.:..-x:x......:.. 10M2D54M1I12M 56/76 73.7% 77/94230402 0.0% 3/76 3.9% 54361845 NA +8807 chr4 + 190214555 130405204 130405203 130405509 306 TTTAAATTTCAATCATTG--TAATTAATGTCTGATATAAATTATTTTAT----AAAATTAATATATTGATTACAACAGTTAAGTGTAATTATTCTATCTATTCAAG-ATTTTTTATTACTACTTTTTAACATCAAGGTAAACTCAATGGAGGATAATTATCATAACAATAATTCAGCATACATTTTCCAGTCTGTTTGGTAATACAGTATGTTCTCCACAGAGTCCCCACCTGTACGTTAATCAGTCACTCATGAACCTACCTCCCTGTCCAGTGAGCCCTTCTAGAAGTAATTTAAAGAATAATATTTTGGG chr4 + 94230402 27016129 27016128 27016438 27016129 27016128 27016438 310 TTTAAATGACAAGAGTTACCTAATTCCTACC--ATATGAATAATTTTTGCTTGAGAATTAACTTATTAATTACAGCAGTTAAACGTAATTATTCTGCCTCTTAAGGTGTACCTTATTATTGCTTTTTGACAATAAGACAAAATCTGCCAAAGGTAATTATCATAACAATAATTTGGTGCGTGCTTTTGATCTTGTTAGG-AATACAATATAATCTTCATGAAATGATCTTTTCCATGTTAATCAGTCATTCACAGAAAAGTCTTTCATGTTTCTTAGTCCTTTGAGAAGTGGATTGAAGCTTGATAATTGGAG .......xx...xx:..:--.....xx.::.--....:...x.....xx----.:......:x....:......:.......::...........::..x..x.:.-:.x::......:.:......:...x:...::...x..x::x:.:.:....................::.:::::::...:x.x::....x..-......:...:x...:..:::.:.xx:.x::.x:.:............:...:::.xxx::..::.xxx::xx.x..:....:x......::x..:...xx.:...x..x.:. 18M2I11M2D16M4I53M1I92M1D113M 194/303 64.0% 310/94230402 0.0% 10/303 3.3% 103389075 86825480 +3141 chr4 + 190214555 130406029 130406028 130406068 40 TGTTTTTGTTTTTTTTGTTTGTTTGTTTTTTGAGGCAGAG chr4 + 94230402 22359252 22359251 22359291 22359252 22359251 22359291 40 TGATTTTACTTTTTTTGTTTGTTTGTTTTTTGAGACAGAG ..x....::.........................:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 108046777 82167778 +3205 chr4 + 190214555 130410262 130410261 130410302 41 TCATTATATATATATATATATATATACACACACACATATAT chr4 + 94230402 41650589 41650588 41650629 41650589 41650588 41650629 41 TCATTAAACATATATATATATATATACACACACACACGTAT ......x.:...........................::... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 88759673 NA +3188 chr4 + 190214555 130413281 130413280 130413423 143 AGCTGGTACCAATTCAACTGGAACTATCCCAAAATTCGAGGAG-----TGAGGACTTGTTTCTAACTCATTCTATGAAGCCAGCATCACCTTGATACCAAAATCTGGCAAAGACAAAAAAAAAAAAAAAGAAAAAAAAACTACAGGGT chr4 + 94230402 37628029 37628028 37628161 37628029 37628028 37628161 133 AGCCCGTAGTAATTCACATGGAAAT----CAGAACTCTTTGAGATATTTGAGGCTTTGTA---AACT--------ACAGACAGCATCAAGTTGTCTTCCACTTATAGTACAGGGAAAAAAAAAAAAAAAGAAGAAGAAACAACAGAGT ...:x...x:......xx.....x.----..:..:..xxx...-----.....x:....x---....--------:x..x........xx...x:x:.x.xx.x.:.:.x..:x..................:..:....x....:.. 25M4D14M5I12M3D4M8D73M 91/128 71.1% 133/94230402 0.0% 20/128 15.6% 92785252 NA +3254 chr4 + 190214555 130428250 130428249 130428309 60 GTGTGTGTGGGTGTGTGTGTGTGTTTATATATATATATATATATATATATGCACATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .........x...::........x:.:......:...:.::.:.::.:.:...x.:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 51162731 NA +3003 chr4 + 190214555 130428255 130428254 130428336 82 TGTGGGTGTGTGTGTGTGTTTATATATATATATATATATATATATGCACATATATATTCTTCAATTCATCTTAAACTCATTC chr4 + 94230402 23522764 23522763 23522845 23522764 23522763 23522845 82 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCAACCCACTTTATGCCTTTTC ..x.:..::..........x...............x:x.x.x:x..:x:x.x.:.x........::..::...x:.::x... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 106905491 83309064 +12817 chr4 + 190214555 130435691 130435690 130435960 270 AAAGGATGAATAAAGAA-AAAGTTTAAAA------TAGAATAGTCTCTCATTACTCATGCGTTTCCTTGACTCTTGTTCCTCTAGGACATCTGAAGATATTTAGTTTCATTGTTCTCTGAGTAGCTCATGAATATTTCAGCTCCAAATGGTTGAACGTTCTTTTTACTAGTCCATTTAAATTGCAGCACAAATATGTTTTTTTACATGTGTTGCTGGAAAACTTGGCGATTTAGGGAACCTTAGGCTTTTTAAAAAAAAAAAAATAACAGCTACATA chr4 + 94230402 27026420 27026419 27026690 27026420 27026419 27026690 271 AAAATAAAAATAAAGAACAAAGTTTGAAGGCACAGTAGAACAGTTTCTAGTTACTCCTGTGTTTTCTTGACTCTTTTTCCTTTAGGATAGCTGAAGCAATTGAGTTTCATCGTTCCCTGAGTATCTCATGAATATTTCAGTTCCAAATGGTTGAATGTTGTTTTTATTAGTCCATTTAGATTGCAGCACAAATATATTTCCCT--GTGTGTGACTG--AGATTCG--GAATTAGGGAATATTTGTGGCATGAGGCAATAAACAAAAAGAAATGCATA ...:x.x:.........-.......:..:------.....:...:...x:......x..:....:..........x.....:.....:.x......xx...x........:....:.......x................:..............:...x......:...........:................:...:::.--:.....x:...--.:.:.:.--..x........:x..x.xxx:x.x.::x..x...x..x..x.:x.:.... 17M1I11M6I168M2D11M2D7M2D50M 206/264 78.0% 271/94230402 0.0% 13/264 4.9% 103409271 86805284 +3211 chr4 + 190214555 130447326 130447325 130447393 68 ATTCAGTCTGTCTCTCTCTCTC--------TCTCTCTCTCTCTCTCTCTCTCTATGTGTGTATATATATATATATA chr4 + 94230402 4618332 4618331 4618407 4618332 4618331 4618407 76 ATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ...xx.x....:.:...:...:--------.......::..............::x.:..:......x.x...... 22M8I46M 52/68 76.5% 76/94230402 0.0% 8/68 11.8% 125828994 64385561 +3163 chr4 + 190214555 130447344 130447343 130447410 67 TCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTGTATATATATATATATATACCTATAATTTCAATT chr4 + 94230402 60831530 60831529 60831596 60831530 60831529 60831596 67 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT ...x.....x.............x.x...:.:...:....:.:.:.:::.:..:.x...x.x..x.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 69615814 NA +3201 chr4 + 190214555 130447350 130447349 130447408 59 TCTCTCTCTCTCTCTCTCTCTATGTGTGTATATATATATATATATACCTATAATTTCAA chr4 + 94230402 60831530 60831529 60831588 60831530 60831529 60831588 59 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAA ...x.....x...........x.....:.....:.:....:.:.:..x:.:.x..::.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 69615820 NA +19383 chr4 + 190214555 130449754 130449753 130450365 612 CACTTAACTAAAGAGTAATATTATCTTACTCCACCTAAAA----CAGTTGGCCTAAAAATTATGAA-ATAATTTGCATTATCAATGTTGAACAGAATAAAGGACCAGGCA-GTTTTAATATATGCATGGAT---AAGCTGACTCTTTCAGAAAGGATTTAAAAAAATGTAAACCTTAAGCCATAGATGTGTAAAAGAGCATCAGTGTAAGATTATTACTGGCAATTACATCAGGTGTCTCTGAAGAGTGTTCAGGCACATGCATAGAAATGAATATTATTCTGTCTTTAATTTCTTTGTTAGCATCAACAGCAGGTTGCTTATTTTTAGTTAATTATGAATTGCAAGATAAAGGAAACAGGCATATTTTTTGATAGAAAA--TGAGATAAAAATCTCATTTTCTATCTGGAAGATTCTGTAATGTGTTATGATTGCTTTCAGGAGCACA-ACTTGCTGAAATTAAATAAACTGGCT--ACCAAGAAAACTGGAAAAGTGAGAAAATGTAGGTGCAGGGCATGGAAAGGCTTCCTGAAATTTCTGATTTAGTACAAAACTATATTGCTGTAAGGATGTGTTGTATTGTGTTAACC-CATGTGTCCCAA-GCAAATAACATACATTTTAT chr4 + 94230402 27028392 27028391 27028994 27028392 27028391 27028994 603 CACTTGATCCTAGGGACACATTATATTTATCCAACAAGTAGCATCAGTTGG---AAAAATCAGAACTAAAATTCACACCATCTCTGTCAAATATACCAA-----CACGCAAGTTTAAATACGTGTATTTATTAAAAAAAAACTCTTTAGGAAGAGG---------------GCCTTAAGCTGTAGCTGTTAAAAAAAACATCAATGGAATATTGTTGCTGGCAATCAAATCAGATGTCTCTGAAGGGTGTCCAGCCATGTGCACTGGAAAGAACACTATTCTTTCCTCATTTCCTTTGCTGGCACAAGCGGCTGTCTGCTGATTTTCAGATAATTAAGGATTGCATGATGAAGGCAACAGGCATATTATTTGATAAAAGGGCTGAGATGAAGGTGCCA-GCTAAGTCTGGAAGATTCTGTAATTTGATGTGACTGCTGTCAGGAACACAGACTTGCTGAAATTAGATCTACTGGCTTCACCAGAGTAGCTGGTGAAGTGA-AAAATGTACATGCAGAGCTTAGATGGGTTTCCTGAAGTCAGTGATTGTAAATTTTCATACATCACTCCAGGGCTAAGAAACACAGTATTAACCTTCTGTGTACCAAGGCTGACAATTTGCATTTGAT .....:.::xx..:.xx.:.....x..xx....x.x.:x.----.......---......:.x:.x-.x....::..::...xx...::..:.x.x:..-----..x...-....x....::..:..xx..---..:xx:.......x:...::.:---------------:........::...x...xx....:.:.....:..x..x...:..:........:.x.....:...........:....:...x..::....:x.:..x...:.:......x..:.:.x..:.....:.:...:x.:.:..x.x:....x.....:..x......x.:......x...:....x............x.......:..::--......:..::.x:..-x:.xx:..................x..x.:...:....x......:....-..............:..xx.......--....:::x.:....x:......-........x:.....:..x.:..x:..:........:.:xx.....xx:x.:xxxxx..:..::..x:.:..x.:x.xx::.:x..:......-:x.....x....-..x:.:..:x.:.....x.. 40M4I7M3D12M1I32M5D6M1I20M3I22M15D209M2I16M1D50M1I26M2I22M1D93M1I12M1I20M 411/587 70.0% 603/94230402 0.0% 41/587 7.0% 103421362 86793193 +3111 chr4 + 190214555 130451069 130451068 130451144 76 AGAAGGTATGTGTATGTGTGTGTGTGTATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAAAGAG chr4 + 94230402 3414917 3414916 3414992 3414917 3414916 3414992 76 AGATGGGCTGAAAATGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGAG ...x..xx..x:x...x.....:x.:.:.....:.....x...:......::::xx..:......::..:x..... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 127036152 63178403 +3603 chr4 + 190214555 130483978 130483977 130484098 121 TTTATGACCAAGAACCCTAAAGCGAAAGCAACAAAAACAAAGATAAATAAGGAAGACTT----------AACTAAACTGAAGAGCTTTTGCACAGCAAAAGGAACAGTCAGCAGAATAAACAGACAACCCA chr4 + 94230402 73295272 73295271 73295396 73295272 73295271 73295396 125 TTTGTGATCAAGGCATCTGAGGCAGAAGAAATAAAAACAAAAATAAATAAGTAACACCTATTaaaaaaaaaaaaaaaaaaaaaaCCT------AACCAAAAAACCAACCAACCAAACAAACAAAAAACCTA ...:...:....:xx:..:.:..::...x..:.........:.........x..x..:.----------..xx...xx:..:.:.:.------.:.x...::.x..::..:.x:..:.....:.x....:. 59M10I18M6D38M 77/115 67.0% 125/94230402 0.0% 16/115 13.9% 57188706 NA +3441 chr4 + 190214555 130484712 130484711 130484843 132 ATATTATATATTATATA-----TTATATATAACATATTATATATTATATATTATATATAACATATTATATATTATATATTATATATAACATATTATATATATAATATATATTATATATACGTATATATTATATATGT chr4 + 94230402 46018807 46018806 46018943 46018807 46018806 46018943 137 ATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATAAAGGT ...:.::....:..x:.-----.:...x..x::....x:.....xx.:.:x.....:xx.x....x::....x......x.x.x....:...:x:..:...x.......xxxx::...:::..x....x...x.x.. 17M5I115M 84/132 63.6% 137/94230402 0.0% 5/132 3.8% 84465905 NA +3095 chr4 + 190214555 130484810 130484809 130484872 63 ATATATATTATATATACGTATATATTATATATGTGTATATATATAATATATATTATATATACG chr4 + 94230402 73478948 73478947 73479010 73478948 73478947 73479010 63 ACGTGTATAATATATATATATATGTCATATATGTATACTTACATAACTAATGTTATATAAATG .::.:...x.......::.....:.:........:..:x..:....:xx..:.......x.:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 57005862 NA +3317 chr4 + 190214555 130539704 130539703 130539776 73 GTTATTTATATAAACTTCCTTCAAATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATA chr4 + 94230402 55892159 55892158 55892231 55892159 55892158 55892231 73 GTTTGTTAAAGCAATTTATTTTAAAAGTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATA ...xx...x.xx..:..x:..:...x......x...:.:.x.....x......:....x...:..:...:... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 74647545 NA +3103 chr4 + 190214555 130539713 130539712 130539790 78 ATAAACTTCCTTCAAATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATCACATTTTT chr4 + 94230402 68837076 68837075 68837148 68837076 68837075 68837148 73 ATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCA-----CACATTTTT ..x..x...:xx:..:x::.....:.............:.:.:.x...:...:...:.:..::.-----......... 64M5D9M 52/73 71.2% 73/94230402 0.0% 5/73 6.8% 61702637 NA +3151 chr4 + 190214555 130539719 130539718 130539781 63 TTCCTTCAAATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 85834531 85834530 85834593 85834531 85834530 85834593 63 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT ..:x....xx.....x...............:...xx..:..x::...:....:..x...:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 44705188 NA +3403 chr4 + 190214555 130548049 130548048 130548150 102 ACCCTGTCTCAAAAGAGAGAGAGA-AAGAGAGAGAGAGAGA------------GAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAGAAAAGAAAG chr4 + 94230402 15855366 15855365 15855480 15855366 15855365 15855480 115 ACACTGTCCAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ..x.....:x.:.:x.:.......-...x.::x:...:...------------:.::......xxx.........:....:.....:::....::x.:.......x:...:.::. 24M1I16M12I62M 69/102 67.6% 115/94230402 0.0% 13/102 12.7% 114692683 75521872 +4279 chr4 + 190214555 130548057 130548056 130548211 155 TCAAAAGAGAGAGAGAAAGAGA---GAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAG--AAAGAAAGAAGAAAAGAAAGAAA--GAAGAAAAGAAAGAAAGAAGAAAAGAAA-GAAAGAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 49044658 49044657 49044820 49044658 49044657 49044820 163 TTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .:...::::.:...:x......---.:.:x:.xx.......x.::x..x....::x.xx:.:x:.::..:.:.....--..............:.x:.:...--:..............x....x.:.:..x-..:.xx..:....::....:x:..x..x.. 22M3I52M2I23M2I28M1I30M 102/155 65.8% 163/94230402 0.0% 8/155 5.2% 81503399 NA +4313 chr4 + 190214555 130548057 130548056 130548200 144 TCAAAAGAGAGAGAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAGAAAGAAA chr4 + 94230402 14751864 14751863 14752007 14751864 14751863 14752007 144 TCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAA ..x..x:::...:.x...xx...:x..x.:.:......::x::...::x:x::...x....x.x....:x...::.....:..:..xx.:......:.::::.x::....x....:x....xx...::...x:...:.::.... 144M 86/144 59.7% 144/94230402 0.0% 0/144 0.0% 115796193 74418362 +4521 chr4 + 190214555 130548059 130548058 130548163 105 AAAAGAGAGAGAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAG----------AGAGAGAAAGAAAAA-AGAAAGAAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGA chr4 + 94230402 39943881 39943880 39943996 39943881 39943880 39943996 116 aagagggaagggagagaagaaagaggagaagaaagaataagagaagaTAGCAAGCAGGGAGAAAGAAGAGCATAAAGAGAGAAAATGAGAGTAGAGAAGAATGAAAGAGGAAAAGA ..:..:..::.:::.::...:....::::........x:.:...:----------..:.........:.:-.x.....:...:..x..:..x...:.....x......:....... 45M10I15M1I45M 75/105 71.4% 116/94230402 0.0% 11/105 10.5% 90604178 NA +3034 chr4 + 190214555 130548082 130548081 130548134 53 AGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAGAAAG chr4 + 94230402 5788321 5788320 5788373 5788321 5788320 5788373 53 AGAAAGAAAAGGTGAGAAAGGTAGAAAGAAAGACAAAAGACAAAAAGAGTAAG ...:...:..:.x:......:x...:.......x......x.:......x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 124759761 65454794 +3090 chr4 + 190214555 130548084 130548083 130548147 64 AGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAGAAAAGA chr4 + 94230402 24148911 24148910 24148974 24148911 24148910 24148974 64 AAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGA .::..:...:...:...............:...xx.xx:x.x:..x.:......:..:...... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 106399173 83815382 +3009 chr4 + 190214555 130548128 130548127 130548204 77 GAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAA chr4 + 94230402 38078777 38078776 38078853 38078777 38078776 38078853 77 GAGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ...x......:.:.:...........:.:.::..::..x:x.:::...xx.xx.x.:....:.x:....:...:... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 92469351 NA +3816 chr4 + 190214555 130548155 130548154 130548271 117 AAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAGAGAAAGAAAGAAACAGA chr4 + 94230402 89498607 89498606 89498723 89498607 89498606 89498723 117 AGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGATTAATTAGA .:.........x::.:::...x.:...x:x..:..:.xx..::.:..x..:..:x...x.::..::..:x::.x...x........:.:....x...x....:..::.xx..x:... 117M 72/117 61.5% 117/94230402 0.0% 0/117 0.0% 41049548 NA +3477 chr4 + 190214555 130554137 130554136 130554207 71 CACCTATAGTCCCAGCTACTTGGGAGGCTGAGACATGAGAATCACTTCAACCTGGGAGATGGAGGTTACAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.:....:...........::........x.x..x...x.....x....::.:..x.xx:..:.::.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 54520930 NA +3311 chr4 + 190214555 130571102 130571101 130571169 68 AACTTGATCATATAAAAGGGTTTTTTTGTTGTTGTTTTTTTTTGTTTTTGTTTTTGTTTTTTTTTTTT chr4 + 94230402 89868323 89868322 89868385 89868323 89868322 89868385 63 AACCTTGCCATATGGAAGGGTTTTGTTGTTGTTG-----TTTTGGTTCTTTTTTTGTTTGTTTGTTTT ...:.x::.....::.........x.........-----.....x..:.x.........x...x.... 34M5D29M 51/63 81.0% 63/94230402 0.0% 5/63 7.9% 40702779 NA +3043 chr4 + 190214555 130595944 130595943 130596002 59 ACATATATACACACATACATATACACACACACACACACACACACACACACACATATATA chr4 + 94230402 54963202 54963201 54963260 54963202 54963201 54963260 59 ATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA .:.:.x..:.....x..:...:.........xx...:::.:.x..:........x.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 75632742 NA +3232 chr4 + 190214555 130605597 130605596 130605645 49 AAAAAATGTTTGTTTTTTTTTTTTTTTTGGTTATTGCTGTTGTTGTTGC chr4 + 94230402 64467867 64467866 64467915 64467867 64467866 64467915 49 AAAAAGGGTGGGTTTTTTTTTTTTTTTTTGCTGTTGTTGTTGTTGTTGC .....:x..xx.................x.:.:...:............ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 66137730 NA +3523 chr4 + 190214555 130611994 130611993 130612074 81 GTGGTGGCACATGCCATAGTTCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGATGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG---TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-...:..---................::........x.xx:x...x.............:.xx.xx:..:..:.. 6M1D6M3D65M 60/77 77.9% 77/94230402 0.0% 4/77 5.2% 54578793 NA +23441 chr4 + 190214555 130639062 130639061 130639783 722 TCTACAGATCTAGTTAAAATAAAACAATAATAGTCCTTGAAATCTTAATGAAAATTTAATTTTTTTT----AAAGATTTGATAA-ATATACTCACTATTAGGTAAGTTTTTCTCATTAATGGGAATCTGAGTTAACTACATCTGCTCTTTTTAAACCAGTTTTCAGACTAGAAATAAAAAAAGACATTTGCCTCCTAGGTACTTACCAATTTCATTAGAAATGATGGATTTTTTTGTGGTATAGAGATTCTTAGGTGATAA-AAATACTGATTGCTTCTCCTTTCTAATATAGCAATAGTTCATGTCTTGGAACTACTTCTATTGTCAAAGTGAATAATATTTTAATATGTTTAGGTATGGCTTTATTCTTCCTTATAGAAAAATTGAATGACTTTTGACATTAAGAGAGTTTGCTATCAGTCACTGGAGTATTATTGTTGCCAAATCTATTTGATAATGTATTTGAGCTTCAGGTGAGATTCTGGAAAAAGAAAACCAGAGGCTAAAATGTGCCCATTATAGCTCTCTCTCTCTCTTTGGGTGTTTGTGTAAGCCAAGAATCATACATTTTAGC-AAAGCAGGAGAGCTTCTCGGAAAATGGGTCTTATCAGAAACTAGAT------TCGAAATTAGATTGTTTTTGCAGAGCTGTTTCTTAAGCATTTATGTTTGAGCTCTAGAAAGTATTTCAATGTAATATTCAA----GCTTTTGATTTCTAAGCCTTGATGAA chr4 + 94230402 27083417 27083416 27084121 27083417 27083416 27084121 705 TTTAGGAATCTGTCTTTAATAGTACAACAACCCACCATAGAATAGTAACGAAAAACCTATGTCATTTCAAAAAAGAGATGATAATATTCATTCATTATTGGTCAAGTTTTTCTGGATATTAGAGAAGTGAGTTTACTATAAATGCTTGTTTCAAACCAGATTTCACACTGGAAATAAGAAAAGACATTTGCCTTCCAGGTACTTACCAATTCCATTAGACATGATGGATTTCTT-GTATTATAGAGATTCTTAGAAGATGACAAATGCTGATCGCCTCCTTTCTGTAATGTAGCAATAGTTCATGTCTTTGAACTAGTTTTATTGTCAAAGTGAATAATATTTTAATATGCTTAGAGATGGCCTCATTCTTCTTCATGGAAAAATGAAATGACTTTTGACATTAGGGTGTTTTGTTATCTGTTACTTGAGCAGCATCAGT--------------ATGAAATAATTTTGTTTCAGGTATGATTTTTGGAAATAAAATTGAGGAAAAAACAAGTCCTTATTGTA-------CTAGCATTTGGGCCCTTCTTTGTAATTAACGATTGTGGGTTAGAGCAAAAGCAATTGGGCTTTCTATGCAGTGAGTGTT-----AAGCTAAATCAAAGATCTATATGAGGATGTTCTT-TAGAATTGTTT-TTGAGCA--AATCCTTTATCACC---AAGTTTACTACTTTGACATACAAAAATGTCTTTGACTTCTAAGCCCTGCTGAA .:..x::....:x:.xx....:x....:..:xxx..x.::...xx...:.....x::x..x.:x...----.....xx......-..x:.:...:....:.x:..........x:x..x.:.::.xx......x....:.xx....:x...:.......x.....x...:.......:...............:.:...............:.......x...........:..-..:x...............:x...:.-....:.....:..:..:::.:.x....:...................x......x..:..............................:....:x.....:.:.......:.:..:.......x:.................:.:x:x....:....x..:...x...:.x:..::x.--------------..:.x:..x..xx.:.......:x....:.x.:...x:...x:x..:::xx..x.x..x.::...:..-------..xx.x:..x..x:x..:x.xxx.:::..x:..::.:x:..xx...-......:xx.:....::::x:x.:..:..x..-----..:...:..------..x.x..x..:x....:..-:...::.....-..:....--x..x:..x.x.x.:---....x.x::.x.x.:.:..x...----.::.....:.........:..x.... 67M4I13M1I149M1D26M1I178M14D68M7D46M1I32M5D9M6I19M1D11M1D7M2D14M3D23M4I26M 483/688 70.2% 705/94230402 0.0% 51/688 7.4% 103555645 86658910 +3366 chr4 + 190214555 130645053 130645052 130645135 83 CATGGTAGTACATGACTGTGGTTCTAGCTACTTGGAAGGCTGAGGTGGGAGGACTGCTTGAGCTTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:..:..:.--...:....:.........:.........x:xx.x.:.x::.....:.:::.:..x..x:.....:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 54611856 NA +3088 chr4 + 190214555 130663400 130663399 130663454 55 GAAATTAGAAAGGTTTTATAATTTACTATTGATCTTTAGATAAAACCAAAACAAA chr4 + 94230402 64173989 64173988 64174043 64173989 64173988 64174043 55 GAAATAAGAATGGTTTCAGGATGTATTTTCAATCTTTAGATAATACCAAAGCAAA .....x....x.....:.x:..x..:.x.::............x......:.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 66489411 NA +28767 chr4 + 190214555 130675074 130675073 130675895 822 AGGGAAGGAATAAAATACCATGATAAATATGTTTTATTAAAGGGATAGACACCACAGGACAGAAAGATACATGGCAA-TATGAATGAGGAAGGAGACAGTGACAAAA-TAAATAAATGACACATGTAGCTTAGACACCTGAGTAGGGACAGTTTCTATGAAGATGAAAGACAGGAAAATTAAAACTAGAAGAGAAAGGAAAAAAAAAATTACTGGAAAATGATACAGACCTCCTAGGCATGGTTTCAAAAGCTCGCTGAGATAAGAAAAAGCCTTTAAAAGGATAGATCATTAATCACTGGGATTTCAATTAGCTAATATTGACTGGGATGGCAATTATGGCATTGATAAGAAAGGGCTTCTTTTCCTGGAGGTAACACAG-GCTGTTTCCTGACATATCCAGTGAACAATCCACAGGAAGCCTAGGCTATTATACACTTCATCTTAATGTGGCTGGGAAATGAGACAAGGATGAAAAATACGATAGTGGTACAGAGTCATCTAAAGTCTAGTGATCACAATGTCATCAGAATGTCAATGCCCTTGAGGTTGT--ATGTGACAG--AACATAACAAAAGC-CTAGGCTTGA----GTAAATAAATACAAC-AGGCCATTAGGATATGTGAACTAAGTTT-TTTGAAAGTTGATTAAAATCAATTTCAGCTTCAGCAAATT--TATGGAAAAAGAACTTTTTAATAGCAAATA---------GTAGACTGACTTT--------CTTATT--ATAGAAAGCCT------TTTTCTTGTTCTGAA-AGTAAATGTAGTAGTTATATTTT--CTATATTTTTTGAGGATTTTGGAGAAATAAAGCAGCCACAATATTTTCCCTTAAGAGA chr4 + 94230402 27100159 27100158 27100996 27100159 27100158 27100996 838 AGAGATTGGATAAAATTTCAG---AAATATATGTTGTGAAGGACGTAGATGTAGTAGGACAGAAAGATGTATAACAAGTATGTATATAGAACCTTAT-TTGACAAAAAGAAATAAATGGCATATGTAGTTTAGGCACTCGGGTAGGGACAGTACAGATGAAGATGAAAGACAGGGAAATTAAAA----------------AGTAAAAAACATTAAAAATTGGTATAAACCTGCTAGGCAAGATTTCAAAAG---AAGAAGATAAGGAAAGCCTATAAAAAGGATAGATCATTAATCACTGGAAATTCAATTAGTTAATATTGACTGGGCTGGCAATTATGGAATTGATAAGAAAGGGTACCTTTTCCTGGAGGTAATACTGTACTCTTTTCTGATATATTTTGTGAACTATACGGTAAAAGTATTGGCTATTTTCTACTGACTCCTAATATTGCTGGGAAATAAGACAAGGATGATAAATAAGACAAAAGTTGAGAGTCATCTAAAGCCCGGTGTTCACAATGTCATCAGAACTCAAATGCCCTTGAGGTTATAAATGTGAAAGGCAATATCTCAAAACCACTGGACtttaaaatataaataaataaaaCTAGAGAGTGAGTGAATGTGGAATGAGTTGAAAAAAAAATTGATTAAAATCAATTTCAGTTTCAGGAATTTAGTATGAAAAAACAGC---TAGATAACACAGAGGCAGCCCTGTGAGCTGGCCCTCGAGAGACCTTGTTTCATGAGAAGCTGCTTGAATTTTTTTCTCCCGAATAGTGGA--TACTGGGTGTATTTTAAAAATAATTTGTGTTGTCTCCTGGGAAATTTATCAGCCATACAATTCTTTCTCATGAAA ..:..xx.:.......x:..x---......:.x..:.x..:.:x:....:::x::.............::..::...-....x..:x:...xxxx.:-x........-x.........:..:......:....:...::.:...........x:xx..................:.........----------------.:x.....x:.:.::...x..:..:.:....x.......x.:.........---:xx:.......:...:x.:x.x.........................:.x.........:..............x............x...............:x:................:..x.-:..x...:....:....::x......x..x.:xx::...:x.x.......x.x:...xxx..:....:.x..........:............x.....x..:.:x:..xx..............:.::...x.................:x:x...............:.--......x..--..:..xx.....x.-..:.:...x.----:..........x...-..:xx:.x..x:x.....:.x.:....x-xxx:...:....................:.....x..x..--....:.....x.:.---.x:...:..x.x.---------..:::...:.::.--------...:..--..:::....:x------....:..x.:.:...-...::.--..x.:.x.:......--xx...x...x..xx.x:.::x.:.....xx.x......:.xx...:.::..:.x..:. 21M3D53M1I19M1D9M1I76M16D51M3D127M1I171M2I9M2I14M1I10M4I15M1I28M1I40M2I14M3D13M9I13M8I6M2I11M6I15M1I6M2D15M2I58M 584/794 73.6% 838/94230402 0.0% 72/794 9.1% 103574915 86639640 +3148 chr4 + 190214555 130690022 130690021 130690119 98 TTTGACTTTTAAGAGTTATATATATATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATA chr4 + 94230402 76376841 76376840 76376938 76376841 76376840 76376938 98 TTTCAGTGTGAACTGTCATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ...x.x.x.x..xx..:..::...:x.x.x..:....::.x.x...:..:...::.....x.xx..:x.:.:.........:.::.....x.:.x... 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% 54313181 NA +3464 chr4 + 190214555 130690047 130690046 130690162 116 ATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATATATATACAT chr4 + 94230402 56938584 56938583 56938697 56938584 56938583 56938697 114 ACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA-ACAGATAC-TGTATTCATTATTCTGTACATGCAGATGTATATGCATATAAAAGCAT .:.:...x......xx.x.....x..:x.....::.x.x.....:...x:.x.......-.:.x...:-.:..:x...xxx.x.:..:..:..x........::.....x.x:... 59M1D8M1D47M 78/114 68.4% 114/94230402 0.0% 2/114 1.8% 73751463 NA +3004 chr4 + 190214555 130690079 130690078 130690159 81 ACACATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATATATATA chr4 + 94230402 76376858 76376857 76376938 76376858 76376857 76376938 81 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA .::....:x.x.x..:...:::.x.x...:..:...::.....x.xx..:x.:.:...........::.....x.:.x... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 54313221 NA +3308 chr4 + 190214555 130690135 130690134 130690201 67 ATACATATGTATATATATATATATACATATATATATATATATATATACACATATATATATATATACA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ......:....:..:.:...:x::....:.x:..:...:.x........:....:xxx......... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 84626836 NA +3102 chr4 + 190214555 130702522 130702521 130702577 56 TGTGTG-TGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAAAAA chr4 + 94230402 83657508 83657507 83657564 83657508 83657507 83657564 57 TGTATGATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAA ...:..-...x...x........:............x.x.x.........x...:.. 6M1I50M 47/56 83.9% 57/94230402 0.0% 1/56 1.8% 47045014 NA +3170 chr4 + 190214555 130714352 130714351 130714404 53 CCCCTCTTTCTCTCTCTCTCTCTTTCCTCCTTCTCTTCCTCCTCTTTTTTTTT chr4 + 94230402 36924295 36924294 36924347 36924295 36924294 36924347 53 CCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTT ..:x.....x.....:.x.:.:.........:.....:.......x...x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 93790057 NA +8390 chr4 + 190214555 130714719 130714718 130715091 373 TTCATAGGAACCAGTTAGCATACATGATTCTAGTTCAGATACTGGGTATGTGACGAAGCAAATGCGAAAAAATTCTGTAGAGTTATTTGGGCCATTCTTTCACATGGAAACACCATTCATCTTTGATTTTCCAAAATTTTCTG----TATGTTTGATTATAAGGTCTTAAATAAATCCTCATGGGAATTTGTGGGAAATCTCAAAATACCATGTCTATTATAGTCTCTTTATTACTTCTTCATCATGGATAACTCTCT--AAGTAGGAGAGATAACTCAGCAGCATCTGTTTTGATACCTTCCA----TGTAAAATTGGCTGAGCTATTTAAAC-----AAACTCTATAAATTTCTGCAGTTGGGTCTTAGCATATCCATTAGCCTTA chr4 + 94230402 27104499 27104498 27104871 27104499 27104498 27104871 373 TTTATAGCAGGCAATTA--ATGTGTGATTCTGGAATCCTCTCTGGGTTT------------ATGTGATAAAACGCTGTGAGGTTGATTGCACTGCTTTTCCCCCACAAAATGTAGCTTCTCTTTGATTCTGAGAAAATTCCTAACTCCCTGTTTGATTATAAGGTCCCACACAAATCCTCAAGAGAGGTAAGCAGAGGTCCCTGTAGGTTAGGTCTGTCATAATTTTCTTAGAACAGCTCTATTATGGATAATTCCCTGGAAGTCAGCTGTAAAGCTCAGCAGGTTCCTTCCTGATATCCTTCACATTTGGATAATTAACTGAGCTGTTTGAACAACAGAAACTTTATAATGTTCAGCAGTGGGAGTCTTGCA-GCTGATCAGCTTTA ..:....x.:x..:...--..:::.......:.xx:xxx:x......x.------------...:..x....:x....:::...:x...x:.:::.:..:.x.xxx:...:::x::.:x.........:.xx:...x..:..:----:x.................::.x.:.........x.:..:x.x:xx:..::..:.x:x.x:::.x....:.:...:.:.::...xx..xx..::..:........:..:..--....x:.xx:x.x.:........xx..:x.::.....:.:.:..----..x.x....::.......:...:...-----.....:.....xx...x.....x..:x::.x...-:::x..:...:... 17M2D30M12D82M4I111M2I44M4I26M5I34M1D14M 224/358 62.6% 373/94230402 0.0% 30/358 8.4% 103610220 86604335 +11620 chr4 + 190214555 130723088 130723087 130723353 266 TACATGAGAAATATTAATATATGGGAGATTTTT-TCCTTTACTACAGTTAAAATAATGTGATTTTTAAATATACTTATGCAGGAACAACTAATAACTAATAATTAAAAGAAATCACATGCAACTCTTGAAACAGTTTCTTAATTGTAACTCATTAAACTAAATTGCAGCATATTATCTCCATTATAATACCCAAAATAGAATTC-GTAATGGTCTTTCTGTCATTCTTCCATGCATTTTA-TATCTGATGTTAAAAAAACTTTTAGAAT chr4 + 94230402 27107971 27107970 27108239 27107971 27107970 27108239 269 TACAAATGAAAACTTAATATACTGAGCATTTTAATCCCCTACTATAGCTCAAAAAACCCAATATTAAAACACTTTTATGCCTGAACAACTAATAACTAATAATTGAAAGAAATTACATGCAACCCTAAAAACCATTTCTTAATTGTAACTCATTAAAATAAATTATGGTATATTATACCAATTACAATGCTGAAAATAGAATTTAGCAGCAGTTGTTCTGTCACTTTACCCTTCATTTTAGCTTTTTATGGCAGATATGTTTTGAAAAT ....x:x....xx........:x.::x.....x-...::.....:..:.x...x..:x::..x..x...:.:x:......xx......................:........:.........:..x:....x:.......................x......:::.:.......x:.x....:...:.:x...........:-.:.:::..:x........:.:.x..x.x.......-:x.:.x...x:.:.x.x::...x.:... 33M1I170M1I35M1I28M 193/266 72.6% 269/94230402 0.0% 3/266 1.1% 103615117 86599438 +3594 chr4 + 190214555 130750834 130750833 130750915 82 GTGGTGGCACGTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----..:.:.......:...::........x.xx.x...x...........:....x.xx:..:..:.. 6M1D6M4D65M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% 54717633 NA +13804 chr4 + 190214555 130765126 130765125 130765509 384 AAACCAAATAGACCATTATTTTCAGCTGTCTGAAATGCTCCCTGTCTCTGTTCACAAAGCAAGCCATATAATCAGCTTTGGAACTTAATAATATCGTTCAAGTGAATAGGAATATAGGAAACAAGACGAAAGGAAGCTAATGCAATATAATAGTACACTTCACTTTTGCAATTGGACAGGTAACTATTATTTCTCAGAATGCTATAGTCCAGGAGTTAGAAA--TTAAAATTTAATTTTAGACATATTAACTAAAACAAATTGGATGGTTATATTATCAAGTATTGCAAAAAATACATTTGTAGGATGTTTGTAGTACATTATCTTGGGACTAGGAATATCTTCCTG--------TTTATTAGAAAAGGACACATTCATATGCCTCT-TTTGTAT chr4 + 94230402 27115839 27115838 27116222 27115839 27115838 27116222 384 AAACGAAGCAGAATATTATTTTTAGTTGCCTAAAGGGCTGGCTGTCT-GACTCACAAACCAACCCATGTAATCAGTTTCAGAACTTAATAACATTGTTCAAGTGAACAGGGATACAAACTGCAAGATTAAAGAGAGTCAAATGCACATAACAGCTCACTTCAACTTCGCAATCAGACAGGTAATTATTATTTCTCAGGATGCCATAGTCCAGCaattataaaatttaaatattaattttaGAAGTCTTAATTATAGCAACCAGAATAATTCTGTT-CAAAATAGTCCCCAAAATAACTTAGCAAGAAGCTAATAGCAATTTACCT---GATTGAGAA------ACTGGCAGAGACTTAATTAGAAATGGAAATTGCAGTTTGCCTCTATTTGCAT ....x..::...x:........:..:..:..:..:x...xx......-x::.......x...x....:.......:..::...........:..:...........:...:...:.::xx:.....:x....::..::..xxxx.:....:..:x.......x:..:.....::.........:.............:....:.........x.:...x...--.....xx...........x:.x....:..x.:...x:x.:..::..x.:..-:x..:..x.x.xx......xx..x.:.:..x.:.x:...:.xx...:..---..:.::...------x...--------..x........x...x.:xx:x:.x.......-....:.. 47M1D174M2I51M1D49M3D9M6D4M8I32M1I7M 265/373 71.0% 384/94230402 0.0% 22/373 5.9% 103649287 86565268 +10305 chr4 + 190214555 130787531 130787530 130787828 298 AAAGAACGTGTGAAGGGATTTCTAAATCTAAAA--------CAAAGGGCAATGTATTCCATAATACT-TATCTGATTATATGCTGACTATATTTCCTTCATGCCAGCATGGAGACAAAAGTAGAATGTTAGAAAGTGTCCCGAGTATCAATTTACCCATTATCTCTAATGAAATTAAATAATGCATGAGGGACTACAGATTGTAATAATAAATATGCAATAAACTTCTTAGCAATGCAAAGAATAAAG-----TAACTTTTTA-----TTCATCTACAGGCAAGTAATTTTCAGCTTTTTAAAAGCTAGATTACCCA chr4 + 94230402 27134139 27134138 27134447 27134139 27134138 27134447 309 AAAGAACTGCTGGAGAGAATT----ACCTGAGAGCCATTCTTAGAGGCTAAGGCAGTCTGTAATGCTCTATCTGATAATAACCAGATTATAGCTCCACAATTCCAACAAAGAAACACAAGTGATATG----AAAGTATAGCGAGTATCAATTTGCCCATTATCTCTAATGAAATTAAATAATGCATATGGGACCACACATTTGAAGAATAAATTCATATTAAAATTCTTAACAGCATGAAGATTAAGGCAATATGATTTTTTAAAGCTTTCATCCAGGGAAAAATAGCTTACTGCTTGCTTTAAGTAAGATTAGCCA .......xxx..:..:..x..----.:..:.:.--------:.:...x:..x.:.x..::....:..-........x...xx.x..:....x:...x:x..x...:..x:..:...x....::x...----.....:.xx.............:................................:x.....:...x...xx..x.......x:::.x....x......:..:::::....x...:.-----.:.:......-----......:.x:.:x..:..::..x.x....x:.xx...:x......x... 21M4D8M8I26M1I59M4D117M5I10M5I49M 208/290 71.7% 309/94230402 0.0% 27/290 9.3% 103653392 86561163 +3776 chr4 + 190214555 130814152 130814151 130814234 83 CATGGTGTTGCATGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACCCAGAAGGGGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x....:.--....:.:...........::...:....x.xx.x...x................xxxx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 54780955 NA +3002 chr4 + 190214555 130867683 130867682 130867726 44 TTTAATTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTCCTGAGA chr4 + 94230402 14223181 14223180 14223224 14223181 14223180 14223224 44 TTTAATTAATTCTTTCTTTTCTCTTTTTTTTTTTTTTTCTAAAA .......xx...........:.:..............:..:.:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 116644502 73570053 +3261 chr4 + 190214555 130897032 130897031 130897098 67 TGTAGTTCCAGCTACTTGGGAAGCTGAGGTGTGAGGATCACCTGAGCCTGTGAGATTGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..................::.:......x:x..x.:.x...:...:..::x:..x..x:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 54863821 NA +3398 chr4 + 190214555 130922859 130922858 130923019 161 GGATTTTTTCTTTATTTTCCTGTACTATTATTGGTTTTTGTTGTTGTTGTTGTTTCCCTTTTCCTCTCCTACCTCCTTAGGGCGTGTAACTGTAGAGAATTCTGGATAGGGTGTTTTGGCTTTGCTTCTACAGTTCTATGTGCTTCTGACATCAGGTTTTA chr4 + 94230402 85507645 85507644 85507783 85507645 85507644 85507783 139 GGGTGCTTTCTCTTCCTTTATGTGGTTCAACTGTTTTTTGTTGTTGTTGTTGTTGGTTAATTTCTTCTCTTCTTTTTTAGGTTCTGCAAGCACTGGGAGTTC---------TGCTTTTGCTTTG-------GATTCTATTTGGTT------TCTGGTTTTA ..:.x:.....:.x::..:x...:x.x:x.:..x....................xx::xx..:..:::..x.:.::.....x:x..:..x:::x.:..:...---------..:...x......-------::......x..x..------..x....... 102M9D13M7D14M6D10M 91/139 65.5% 139/94230402 0.0% 22/139 15.8% 45415214 NA +3095 chr4 + 190214555 130939625 130939624 130939691 67 TGTAATCCCAGCTACTTGGGAGGCTGAGAGAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........xxxx.x...x..........::.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 54906414 NA +6260 chr4 + 190214555 130954407 130954406 130954570 164 ATGATTTACTTAT-AGTGATAAATGTGTCATTTGCTTGTCTTCTATAGCATTCTATACATGTATTTTAATGAATTTCAGCCATCAACTTAATTGATAGTTTTAAACAAAGAGATAGATTTATTTCCACCGTGAGTAAAA---CACTTAACATTTGCAACCTATATAAA chr4 + 94230402 27163236 27163235 27163401 27163236 27163235 27163401 166 ATGATTTATTGACCACTTATACATGATACATTCTCCTGTCATGAATAACACACTATATATTTATTTTACTGAATAATGGCTCCCATTTTAATTGATAGCTTCAGACAGAGAAGTAGATTTATTTCTACAATGAGTAAAACTGCTCTCAAAA--TACAGCCTGTATAAA ........:.x.:-.x.x...x...xxx....:x.:....x.xx...:..:x.....:..x.......x.....xx::..:x:..x:...........:..:.:...:...::............:..x:.........---.x..:..x.--.:..:...:...... 13M1I125M3I9M2D15M 117/162 72.2% 166/94230402 0.0% 6/162 3.7% 103791171 86423384 +32681 chr4 + 190214555 131022171 131022170 131022713 543 AAATCTGAACTGTACAACAGCACTTGTAA-ACCCCTGCACACAATTCTTTGATTCTTGCGGGGGG---------AAAAAAGGAATACAGAAAGAAAAGTGAGTAAAACATTGGTAATTTGTTTAGCTGGTGGTGCAGGCTGTTCTCTGATCAAATTTTGTTTCCCAAAGGAAAGCATCAGTTTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAGGCAAACAATCAAAACCTTCCCAGGAGGGGAAAGAATAAGGCTAGAGCTCCAGAGATCCCATTTAATAAATAAACACCTTCATTTCTGTAAGTTAATTTCACCACAGGAAATAAGTTTAGTCTTAATTATATTGCCTTATGTCATGTTTTATAAAAGGTACATGAGGTTCATTGACTTTCACTTATTAAAGCTTTGGTTGTTTCCAAATATGTTGCATGGGGATTAAGTCTCTGAGGAAATGTCATATGATGAACAATGATATGAAATGCAATATTTTCATC-TTATCCCATGTTATTGGCAA----TTAGATAGATGAAAACAGCCTATTACATTTAATTTT chr4 + 94230402 27570127 27570126 27570682 27570127 27570126 27570682 556 AAATTTGCTTTGTACAACTACAGTTTTAATACTTCTGCATACTTTTTTCTTCTTATAGTTGGGAGGAAAAAAAGAAAAAAAGAATAGGGAAAGAAAAGTGAGTAAAACATTAGTAATTTGTTTAGGTGGTGATGCAGGCTGTTCTCCGATCAAATTTTGTTTCCCAAAGGAAGATATCAGTTTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAAGCCAACAATCAAAACCTTCCCAGGGGGGGTAAGAATAAGGCTAGAGCTCCAGAGATCCTATTTAATAAATAAACACCTTCATTTCTGTAAGTTAATTTCACCACAGGAAATAAGTTTAGT-TTAATTATATTGCCTTATGTCATGTTTTATAAAATGTACATGAGGCTCATTGACTCTCTCTTATTAAAGCCTTCACATGCTGCAAAGATGTTACATGTAGCTTAAGTCTCAGTAGAACCTTACTAGAGTGCACAGTGATGT-AAATGCAATATTTTTATCATTATCCTACGTCTGTGACAAATGCTGAGATTAAAAACAAGATGTTGTTGCAATTTATTTT ....:..xx:........x:..x..x...-..::.....:..xx..:.:.xx..x.x.:x...:.---------......:.....x:.......................:.............x.....:..............:.........................:::........................................:..x.....................:....x............................:.............................................................-..................................x..........:.........:..x...........:..x::xxx:.x....x.....:....x:.x.........x.x:...x:x.xx..x::..x...:....:.-..............:...-......:.:..:xx..:...----.x....x:.x:.x..x.xx:.:..:..x..x..... 29M1I35M9I262M1D141M1D18M1I20M4I36M 451/541 83.4% 556/94230402 0.0% 17/541 3.1% 103452044 86762511 +9730 chr4 + 190214555 131022257 131022256 131022414 158 AGTGAGTAAAACATTGGTAATTTGTTTAGCTGGTGGTGCAGGCTGTTCTCTGATCAAATTTTGTTTCCCAAAGGAAAGCATCAGTTTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAGGCAAACAATCAAAACCTTCCCAGGAGGGGAAAGAATAA chr4 + 94230402 28720972 28720971 28721121 28720972 28720971 28721121 150 AGTGACTAAAC-----ATAATTTGTTTAGGTGGCAGTACAGGCTGTTCTCTGATCAAGTTTTGTTTCCCACCGGAAGGCATCAGTCTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAAGCAAACAATAAAACACTTT---GCAGAGGAAATAATAA .....x....x-----:............x...::..:...................:............xx....:........:.................................:.........x...xx...:---.x..:.....x..... 11M5D123M3D16M 130/150 86.7% 150/94230402 0.0% 8/150 5.3% 102301285 87913270 +3244 chr4 + 190214555 131051265 131051264 131051334 70 TCCCCTCCCATCCCCTCC-CCTCCCCTCTCCTCCTCTCCTCCCCTTCCTTTTTCTTTCTTTCTTTCATTTT chr4 + 94230402 53757784 53757783 53757854 53757784 53757783 53757854 71 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTT .:.:..:.....:::.:.-....::xxx...:..:.:..:....:........:..:....:....x.... 18M1I52M 49/70 70.0% 71/94230402 0.0% 1/70 1.4% 77293481 NA +3035 chr4 + 190214555 131051291 131051290 131051337 47 CTCCTCCTCTCCTCCCCTTCCTTTTTCTTTCTTTCTTTCATTTTCAG chr4 + 94230402 35385250 35385249 35385296 35385250 35385249 35385296 47 CCCCTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAG .:.....:....:....::.......:...:...:....xx...... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 95666041 NA +3017 chr4 + 190214555 131055833 131055832 131055931 99 TTGTGATAAGTATATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATATATTCTA chr4 + 94230402 58675352 58675351 58675450 58675352 58675351 58675450 99 TTGGAAAAACTGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTA ...x:.x..x.:.x.x.:.x..x::x..x..x.x..:.:..x.x.:...::.........:.:x:.:.::::.........x..x......x..x:... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 72380481 NA +3078 chr4 + 190214555 131055845 131055844 131055925 81 TATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATAT chr4 + 94230402 58675362 58675361 58675442 58675362 58675361 58675442 81 TGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATAT .:.....:.x..x::x.:x..x.x..:.:..x.x.:...::.........:.:x..:.::::.........x..x...... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 72380483 NA +3226 chr4 + 190214555 131055851 131055850 131055939 89 TGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATATATTCTACTTATATT chr4 + 94230402 58675366 58675365 58675454 58675366 58675365 58675454 89 TGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACT ...:.x..x::x.:x..x.x..:.:..x.x.:...::.........:..x..:.::::.........x:.x.......:x:.:....:. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 72380485 NA +3003 chr4 + 190214555 131055864 131055863 131055916 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 107808142 82406413 +3183 chr4 + 190214555 131055872 131055871 131055924 53 ATATATATATATATATATATATATATACACACACACACACACACACATATATA chr4 + 94230402 61270775 61270774 61270827 61270775 61270774 61270827 53 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ..:x......x.:.......:.......:...::.....x....x...:.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 69785097 NA +3127 chr4 + 190214555 131055879 131055878 131055919 41 TATATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.......................x.x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 126646797 63567758 +3080 chr4 + 190214555 131068413 131068412 131068461 49 AACAACAGCAACAACAAAAACCCCAAAAAAACAAAAAAAGAAAGTTTTC chr4 + 94230402 28452196 28452195 28452244 28452196 28452195 28452244 49 AACAACAACAACAACAAAACCCTCAAAAACACAGGAAAAGATAACTTCC .......:...........x..:......x...::......x.::..:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 102616217 87598338 +18009 chr4 + 190214555 131081309 131081308 131081640 332 TGAGACATAGATAGAAGTATTATTTCTGACATTGGAATCAGAAAAGGGTAACAGACAATAACATGGCTGATTACTAAAGTAGAAGATGTAAATTCTGCTACATTTCTATGCATT-AAAAGCCTCAGAATCCCTGAATTTTAATATAAAATACAATGAAGTGTATCAAATGAGATTCTCCTATCTTGCCTAGTAATAATGTGGTTAAATCACAATGTGAACACTTTAAAGGGCAAAAAAAAATGGCTTTAAAAAAACCTTTGCCTCACTAAGTTTTGAGAATATCTCATTTTATTTCAAAATCTTATTGAACTTTTCTACATTTTGTTCCATGA chr4 + 94230402 27232045 27232044 27232364 27232045 27232044 27232364 320 TGATTCATTGATAAGGGTATTACTTCTGACATTAGATTCAGCTAAGGGTAACAGACAATAACGTGGGTGATTACTGAAGTAGAAGATGTAAATTCTTTCACATTTCTATGCATTAAAAAGGCTTAGAATTCCTGAATTTTAATATGAAATACAATGAAGTGTATCAAATAAGATTCCCCTATCTTGCTTTGTAATAA------TAAATTGCAGTGTGCAC-TTTCAAAGGGT---GAAAAATAGCTTT-AAAGAACCCTTGCCTCTTAAGGTTGAGAAAATATCTTATTTTA--CCAATATATCATTAAGCAGTCTTACATTTTGTGTTGTGA ...xx...x....:::......:..........:..x....xx...................:...x........:....................x::...............-.....x..:.....:...............:.......................:......:..........:.x.......------.....::..:....x..-:..:......:---:......:.....-...:....:.......x:x.:...xx..:.......:......--:...x..x.:...:.:.xx.::..........x:::... 114M1I82M6D17M1D11M3D13M1D43M2D39M 261/319 81.8% 320/94230402 0.0% 14/319 4.4% 103849264 86365291 +4703 chr4 + 190214555 131092022 131092021 131092216 195 AGATTATTTTTATTTAAAAATGTGTTTTCTTGCACCATATACTTAA-TAACTATTAAAAGACATTTGCATTGTCAATAGATGGCAGCATAGCTCTTTAAGAGTTCATGGGGAACTACTTAACAGTTTAAGATCATAGCCATTAGCCATGCTAAAAATGGTAATCTTAATAAA-GCTTTCTCATTGAACTTTTCTTAA chr4 + 94230402 27234168 27234167 27234359 27234168 27234167 27234359 192 AAGTTGTTTTTAATAGAACATTAGCTTTCCTAAGC-----ACTCAAGTAACATCGAAATTACATTTACATTGCCAATAGATGGCAGCATCGCTCTTCAGGAGAGTTCTGTAAGGTACTTAACGATTAATGTTGATGTAAATTACTTCAGCAGAAAGTTATTATCTCAGTAAATGTTGTTCTGCTGTATTTTTCCCAA .::..:......x.x:..x..xx.:....:.:x:.-----...:..-....xx:x...xx......:.....:................x......:.:...xx:x:x.x:.:x........::..x.x.x.x..:xxx....x::xx..x:...:.x:.x....:.:....-.:.x.:::::..x.:.....::.. 35M5D6M1I125M1I24M 120/190 63.2% 192/94230402 0.0% 7/190 3.7% 103857854 86356701 +9176 chr4 + 190214555 131111675 131111674 131112060 386 CTATAATATTTTGGAGCAATAAGT--TAGATT------------AAATTAACCAGTCCATTTAGATATGTT-GTCTTCTATTATGAGCTAAGAAGATCATTATATTTTGACAATGCATAGATCAAATATATGCTAATTTATACTTCTCTGCAATCTTGTT--CTCTTGATTATTTTT--CTTCTTTTAGCAGGCTATTATTTTCTCAAGAGG-ATTTACAAG---TAGCATTCACTGGTCATGACAAACCTTCAATTAACTGGCTTTCCTGCAGTGTGTATTATTATTTCATTATCAAGTTGTCTTTTCATTCTTTTTTCTCACTCTTTCAAGTTATTTATTTATTGT----AATTGGCCTACACACAATTTTCTTAATTATTTTTAATGACACTTT----TGTTAACACTTACACA chr4 + 94230402 27250947 27250946 27251334 27250947 27250946 27251334 388 CTTTAATATTATTGAAAAATGCGTGGTATATTCAAGAGCACAGAAAACTAACCAGTCTAAAATGGGATATTAGTCTACCA--AGGAACTG------CCATTATATTCTAGTA-TGTACAG--------TCTACTACTTTTCATTCACTTGCAATTTTCTTTCCTCTTGTTCATTTTCTGCTTTTATTAGTAGGGTACTATTTTTTCTGAAGACATTTACAATGATTGTTATTCACTGCTCATGGCAAACCTTCAATTAACAGGCTTTAATGCAGCACGTATGATTATCGCATTATCAAGTCA------CACTTTTCTTCATTGGCTTTTCAAGATACTTATTTATTGTTGAGAAGAGTTCCCCTCTCAATT------ACTATTTTTAAGGTGTCTTTTCAGTGTCTATACTTATACA ..x.......x.x..:x...:x..--..x...------------...:.........:.xxxx.:x..:..-....x.:.--.x..:..:------:.........:.:::.-..:.:..--------.x.:...x...x:.:.:x::......:..x..--......x.:.....:--...:.x....:...x..:......:..x::..:-........x---.:x:........x.....:................x......xx.....:::....x.....:x...........::------..:.:..:..:x.::x::.......x..:...........----..xx.x:.:x.x.x.....------.:.........x.xxx....----...:x.:.....:... 24M2I6M12I27M1I8M2D8M6D16M1D7M8D32M2I15M2I33M1I9M3I77M6D40M4I19M6D20M4I16M 257/357 72.0% 388/94230402 0.0% 60/357 16.8% 103860728 86353827 +4142 chr4 + 190214555 131115485 131115484 131115568 84 ACATAGTGTTGTGCACCTGTAGTTCCAGCTACTCAGAAGGCTGAGGTGGGAGGATTACTTGAGCCCAGGAGGTCGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....--......x................:::.........x:xx.x.:.x:......:.....:..x.:x:.....:.. 8M2D74M 62/82 75.6% 82/94230402 0.0% 2/82 2.4% 55082289 NA +13719 chr4 + 190214555 131119694 131119693 131120175 482 AGAATTTTATT-AGTAAGAATACAGACTCTCTTAATTATAAATTATAACTTATAATTACTTTTAGCTGAATAGCTAGGAATGA--------AAGTGGTTTTTGAAAAACATTACAAAATAATTTATCTCTGGTTTTCTTTCAACAAAATTTCCT-CATA---CTCAGCTGCTTAGCATTCTTTATGCAACAATGCAGACTTGATTAGAGCAGGCTAGATTATGATTTTCTCTTTGGAAGGATATTTATGCTCATTATGTGAAAACTTGTGCTGTATTGCCTATTTATGACTGTCTCCAGTGGTAAGACATTTGAATCTCCTGCATAGCTATCAGAATAATATGACTCTAATAAAAATTTAGTATATGCACA----------ATCCAAGGCAATTGTGAGTTCTTCACTTATCACTTCTCTGCCAAACTCCACCCCTAAGGAATTTGACGATTTCTTATTTTTATAAATTA---TCTACCAATTAATTTTGCTT----AAATAATTTAAAAAT chr4 + 94230402 27259850 27259849 27260320 27259850 27259849 27260320 471 AGATTTGTATTGAGAGACAAAAGAAGCTACCTTA-TAATGAATTATCATACATAACTATTTT--GTTGAAAAAAAAAAAAAGATTAAAACAGAATGATCATGAGGAAGCATTAGAG---------TCTTTGTTCCTCTTTTCC----ATGTCCTATATATTGCTCTTCTGCTTAAAATTCTTTATGCAACAATATAGACTTGATTACAACAGAGTAGATTATGATTTTCTGTTTGAAAGGATATTTATGTTCATTATGCAGAGATCT--------TTGTGTGCTTCTGATTGTCTCCAGTGGTTAGGCATTTGAACCTCCTGGATAGCTGCTAGTATAATCTGCCTCTAATAAAAATGTAGTTTATGCATATCTCAGGAAGGTTTAAGGCAGCTGTGAGCTATTCATCT-TCTCTCCTCAG---------------GAGAGGTCTGA-ATTTTCTCATTTAAATACAATGCCTTCTTCCAGTTAACTTTAACTGGAGAAAAAATAAAAAAAT ...x..x....-..x:.x..x.x.::..x:....-.x..:......x.:x:....:..:...--.:....x.:xx.::..x..--------:.:..:.:x.x:::..:.....x.:---------...:..x.::.....:xx----..x....-:...---...xx.......:x.................::...........x.:...:x................x....:.............:........:::.:.::.--------...:x.::..x...:.............x..:........:......x......:::..x.....x..x.............x....x......:.----------:.::......::......:.x....::.-..x..:...x.---------------:..:::.:...-:x.....:....xx...x.x.:---...x...:....:...:x:.----...x...xx...... 11M1I22M1D27M2D19M8I25M9D18M4D7M1I4M3I105M8D96M10I28M1D11M15D11M1D22M3I20M4I15M 321/441 72.8% 471/94230402 0.0% 71/441 16.1% 103859844 86354711 +3052 chr4 + 190214555 131120597 131120596 131120670 74 ATTATAAAACACACACACACACGCACACACACTCACATACACACACACACACATATATACACATATATATGTAT chr4 + 94230402 74526058 74526057 74526123 74526058 74526057 74526123 66 ATTGAAAAACACCAAGATCCACACACACACAC--------ATGAACATACACAAATATATACGTATATATGTAT ...:x.......xx.x.:x...:.........--------.::x...:.....x.....:..:........... 32M8D34M 51/66 77.3% 66/94230402 0.0% 8/66 12.1% 56594539 NA +3435 chr4 + 190214555 131133120 131133119 131133301 182 TTTGGGAAACTAAGGTGGGAGAATTTCTTGAGGCCAGGAGTTCAAGATGAGCCTAGGCAACATAGT----GAGATTCTGTCTCTTCAAAAAAAATTAACTGCACATGGGGGCATAACCCTGTAGTCCAAGCTACTTGAAAGGCTGAGGTGGGAGGATTACTTAAGCTCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033106 76033105 76033277 76033106 76033105 76033277 172 TTTGAGGAAGTAGACTGAAAGAG------GAGGGCAGAAGGC--AGTAAAGATTAGG-GACCTGGTTTGGGAAAGTATGTAATGTCATGAAAGGATGA-TACACAGTGGTGCA----CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:..x..::x..::...:------....x...:..x:--..xx:..x:....-:..x.:..----..:.x.x...xx:x...x:...::x.:.-.:....xx..x...----.x......:.x...................x:xx.x.:.x:....:.:.:...:..:.:x:.....:.. 23M6D13M2D13M1D8M4I28M1D14M4D69M 110/168 65.5% 172/94230402 0.0% 18/168 10.7% 55100014 NA +8317 chr4 + 190214555 131148726 131148725 131148969 244 CAAATGTTTCTTTCTGAAGAGTAATG-GGTTAGTTAAAAAAGAATGCAAGTGTATTCTT-----CTTAGAGTGGTTGATAAACCCCTGAGCTGTAATTTGGTTGCCAAAAATCTAAATAAACTTCATTACTACATAATAAAGCAACTCATATTTAAAATTGGTCAGTTTACTGATTTTAGTGACAAGGGATTTGAATGCATTTTCTTTGTTTGTTGTTAATTTCTTGCTTTCTGAAACCAATCTGTTACT chr4 + 94230402 27265518 27265517 27265765 27265518 27265517 27265765 248 CATATGTACCTTT--GCAGAATCATTTGATTAATTCAAGAAAAAGTCTACTAAGCTTTTTTTGCCTTTAAGTACTTGTTAGGTCCCAGAGCTATGTGGCTGTTGACAAAATTTCAACTAAGCTTCATTACTGCGTAATAAAACAGCTCAGCTTAAAAATTGTTCACTTTATTGAATTTACTGGCAAGGGATCTGACTGTGTTGGCTTCATAGGGTGTAACTTTCTCACTTTCAGAATCCAATCTGCTGTT ..x....x:....--.x...:.x..x-.:...:..x..:..:..xx.x.x.:x::.:..-----...x:...:x...x..:::...x.....:.:xxx:x....x.....x.::..x...:..........:.:.......:..:....xx..x.......x...x....:...x....x..:........:...x..::..xx...::.xx.x...x.x.....::.....x...x........:.::. 13M2D11M1I32M5I186M 166/242 68.6% 248/94230402 0.0% 8/242 3.3% 103883208 86331347 +18405 chr4 + 190214555 131159176 131159175 131159653 478 CAATGTCTTACCAGGCAAGAACTAGTGAACTTATTGTGAGAGAAAAGAGTTGGGGCAGATTTGGAGAATCCCTAGATGTTAATCTACAGATTTTTTTTTAATTAACTCTTAAAATAAAATTTGAGATTTTGTTTGAAATCTAAAGAAAATGGTAAGTATTAGGATGAAGCTGCCTGTAGCCTTTTATAGCTTTTTAT------------CCTTTATGACTGCTCTGTTTCCTGCAGTGTATCTGTGAAGCACAGAACAAGTACATAGCAGATGATTACACTAAGGCACCAAAGTCACTGGAGTGTGAGATAATCTTCAGCGCTGAGAATTAGTGTCTCATGCAACCAAGCAAAGAACCAAAAAGGAGCTGTTTCTTCAGTAGAGTTTAACATCTAAGATACACCTGAAGCCATAGCTCTTTATAACTGCTGAAATCCATACCTTTGACCATTTGGTTATGTATTAGTAAAG-GTTATCTTTTTCTCTCTCT chr4 + 94230402 27269264 27269263 27269731 27269264 27269263 27269731 468 CATTTTCTGACCTTGCAAGGACATATGAAATTGCCTCAATAGGAAAAAAT--AAACTATTTTGAAGGCTTC--------TCATCTATA---TTCTCCCTGAATAATACTTAAAATT---TGGGAAAATATGTCTGAAATATAAGGAGAACAGTGGCTACTATGATGAAACTGGCTGTGGTCTTTTATAGCtttttatttttatttttatctttTAAGGCTGCTCTGTTCCCTTCAGTGTATCTGAGAAGTGCAGAAAGAGTTCACAGCAGATGATTATAATACGGTACCAGAGCTAGTGAAGTGTGAGATAATCTTTTCAGTCAAGAATTAGCGTCTAAGGCAACCAAATGAGAAACCAAAGGGGAGTTATTTCTTCAGCAAAGTTTAACATCTAAGACACACCTGAAACTGAAGCTCTTTATTAGTCTTCAAGTCAAT-------ACCATCTGCTTATATGCTAATAATGTGTTCTCtgtttgtttgttt ..x.x...x...xx.....:..xx:....x..:::x::.x..:...:.:.--:::.x:x....:..:x.:.--------.x.....:.---..:.:::.:.x...:x........x---.xx..:.x.x...:......x...:..:..::..::x..:..x......:...x....:.:.................------------.:....x.:..........:...x...........x....::.....x:...x..:............:.x..x..:....:..::.x..:................:xxx.:::........:....x.x........:::.::.......::....:.:.........:.:................:.........:.::x..........x.x.x:.x..:..x..-------.....:..x....:.::..:...x.-...x...x...x.:.x.:. 50M2D19M8D9M3D25M3D78M12I230M7D25M1I19M 327/455 71.9% 468/94230402 0.0% 36/455 7.9% 103889912 86324643 +3303 chr4 + 190214555 131167287 131167286 131167356 70 CATGGTGGCACGCACCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCCTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x....x.:...........::........x.xx.x...x::.:.........:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 55134090 NA +3603 chr4 + 190214555 131191930 131191929 131192035 106 AAGAGTATAATTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAAAGAAAACTTCTTTAGATATTTATAATT chr4 + 94230402 24792603 24792602 24792690 24792603 24792602 24792690 88 AAGAACAGAATTACTTATGTA-------------AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTC-----AAAATTGCATTGGATTTTTGGAGTT ....::.x.....:x...:..-------------.x...................x:........x.........:-----....:.x.x..:...x...:x.:.. 21M13D42M5D25M 69/88 78.4% 88/94230402 0.0% 18/88 20.5% 106399327 83815228 +3264 chr4 + 190214555 131191939 131191938 131192081 143 ATTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAAAGAAAACTTCTTTAGATATTTATAATTTTTTAAATTTTTTTCAGTAACAGTGTTGCAGTCTCCTTAGTCCTTA chr4 + 94230402 7823260 7823259 7823390 7823260 7823259 7823390 131 ATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTT---------TTACTTTGAAGTGCTTCTTATTCTAATGTTGTTTAAATGACA---TTGTAATTGCCTTGTCACTTA ...x..:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:............---------..x:..x..x:.x:x.xx.x..:...xx..x...x.:.:...---...:.:.:x....:x:x.... 68M9D42M3D21M 87/131 66.4% 131/94230402 0.0% 12/131 9.2% 123368679 66845876 +3238 chr4 + 190214555 131197072 131197071 131197132 61 TTTTTTTGTTGTTGTTGTTTTTCTTTCTTCCTTTTTTTTTTGTAAATTTTCCCCATTAGAA chr4 + 94230402 18824090 18824089 18824150 18824090 18824089 18824150 61 TTTTTTTGTTGTTGTTGCTTCTTTTTCTCATTTATTTTCCTTTAAGTTCTCCACAATGAAA .................:..:.:.....:x:..x....::.x...:..:...x..x.::.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 112372982 77841573 +3002 chr4 + 190214555 131197073 131197072 131197132 60 TTTTTTGTTGTTGTTGTTTTTCTTTCTTCCTTTTTTTTTTGTAAATTTTCCCCATTAGAA chr4 + 94230402 37743685 37743684 37743744 37743685 37743684 37743744 60 TTTTTTGTAGTGGATATTTTTCACTCTTTTTTTTTTTTTCTTTATTTTTCTCCATGGGAA ........x..x.x.:......x:....::.........:x.x.x.....:....x:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 93453388 NA +3483 chr4 + 190214555 131206835 131206834 131206938 104 ATATCTTTTGTTTTTTTATACTCTATATCTTCTCCACTTTCCTCCATTTCAATAAAATGCCCC--CCTTTTCTATTTCTCTTTCTCTTTTGGTTTTGTTTTGTTTT chr4 + 94230402 4334206 4334205 4334308 4334206 4334205 4334308 103 ATGTCTCTTCTTCACTCTTTCTCAGTGTCTTCTTGAACTTGTT---TAGCAACGACTTGCACTGACCCTTTCTATCTCTCTTTTTGTTTTGGTTTTGTTTTGTTTT ..:...:..x..:x:.:x.x...x:.:......:x.x:..x:.---.xx...::.xx...x.:--..:.......:.......:.x.................... 43M3D17M2I41M 71/101 70.3% 103/94230402 0.0% 5/101 5.0% 126872629 63341926 +3126 chr4 + 190214555 131214982 131214981 131215090 109 TACACACATGTACACACATGTCTATACACATATGTGTTTATACATGTGTATATACACATATGTATCAACATATGTGTATATACACACATATATAAATATATATGCACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:...::...::x:x::..xx::..:x:......::.:.:.:..::x::.:...x:...:....xx..x:...:x.x.:.::.:.::.:...:.....::........ 109M 61/109 56.0% 109/94230402 0.0% 0/109 0.0% 110105788 80108767 +3130 chr4 + 190214555 131215053 131215052 131215122 70 ATGTGTATATACACACATATATAAATATATATGCACACACATATGTGTATATATACATGTGTGTATATAT chr4 + 94230402 41749091 41749090 41749160 41749091 41749090 41749160 70 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATAT ...xx......x.....:......:.x.....xx::.::::::.:......:........::.:x..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 89465962 NA +3080 chr4 + 190214555 131220245 131220244 131220306 62 TTGCAACTCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGT chr4 + 94230402 54568127 54568126 54568188 54568127 54568126 54568188 62 TTGAGGCTTATGTTGCTTATTACTTTCTTTTTTTTTTTTTTTTTGCCTTCCAATTTATTGGT ...x::..:x..:.x:..x..x:...:...................:.....x..xx..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 76652118 NA +3181 chr4 + 190214555 131238793 131238792 131238876 84 TGTTTCCAAGGAGATTCTTTAGATGTGGAAGAAAGAACAGCCTCCCTCCCCTTTATA-AACTGAAAATAAAAATAATTTTCTTTC chr4 + 94230402 89598890 89598889 89598971 89598890 89598889 89598971 82 TGTTTCCAAAAGGATTTTTTAGAGGTGCAAGAAAATGCAGCCACTTTCCACTTTGGAGGACTCACACT---GATTATTTTCTTTC .........:::....:......x...x......:x:.....x.::...x....:x.-:...x.x.x.---:..x.......... 57M1I10M3D14M 60/81 74.1% 82/94230402 0.0% 4/81 4.9% 41639903 NA +3589 chr4 + 190214555 131241810 131241809 131241992 183 CTTTTTATTTCTTTATTTTTTTATTTTTTATTTTTATACTTTAAGTTCTGGGTTACATGTGCAGAACTTGCAGTTTTTTTTTTGTTGTTGTTGTT-------------TTGTTTG--TTTGT------TTTTTTAGATGGAGTCTCGCTCTTTCGCCCAGGCTGG-----ACTGCAGTGGCGT--GATCTCAGCTCACTGAAAGCTCGCCT chr4 + 94230402 13065010 13065009 13065220 13065010 13065009 13065220 211 CTCTTTCTCTCTCTTCTATCCTTTTTTTTTTTTTTAAACTTTCAGTTGAGAATAATGTGGGTTGTTTGGTTGTTTTTTTTTTTGTTGTTGTTGTTGGAAAAACATGCACTATTTAACTCTGTACACCATCCAGCACATGATGTCTTGGCCCCTGGCTCTGGCTCGCTGTCACTGTAATGAAGTAAAATTTCAGCTCGTTAAAGGCTTTCTT ..:...x.:...:.x:.x.::.x......x......x.....x....xx.::.x.::..x.:x.xx:xxx::x......................-------------:.:...:--.:...------.::xx:.x...:x....:.x:.::.x..:.x....x.-----....:.:..:x..--:..:.......::.:..:...:x.:. 95M13I7M2I5M6I37M5I13M2I26M 117/183 63.9% 211/94230402 0.0% 28/183 15.3% 118176800 72037755 +3382 chr4 + 190214555 131241816 131241815 131241922 107 ATTTCTTTATTTTTTTATTTTTTATTTTTATACTTTAAGTTCTGGGTTACATGTGCAGAACTTGCAGTTTTTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTT chr4 + 94230402 28945625 28945624 28945713 28945625 28945624 28945713 89 ATTTCTTTCCTCTTCTATTTC----------ACTTTAGGTTTCA--TTGCCTTT------TTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTT ........x:.:..:.....:----------......:...:::--..:.x.x.------:..xxx..x.x...x................................ 21M10D13M2D8M6D47M 70/89 78.7% 89/94230402 0.0% 18/89 20.2% 102296191 87918364 +3403 chr4 + 190214555 131241887 131241886 131241933 47 TTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTAGATGGAGTCT chr4 + 94230402 55777111 55777110 55777157 55777111 55777110 55777157 47 TTTTTTGTTATTGTTGTTTTGTTTGTTTGTTTTTTAAGATAAGGCTT .........:.........................x....:::.::. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 75464776 NA +3330 chr4 + 190214555 131248175 131248174 131248410 236 TTTACAGTCTAATATTATTGCCTGTAATATTAAAGTAGATAAATGTACATATATTTATAAATAGTATCTACTAAGTGTAAATATTTTCAAAGGTCCTTTGTAAGTGTTTTGGAT-------AACAGAATTTATTTAAACCTGAAACATCTGTAGAGGTAAGTATTATTATTATCTTCATTTTATTGATGGGGAAATTGAGGCACAGAGCTTTTCCAATGAGTTACTTGTGTAATAAGCATCAG chr4 + 94230402 85633648 85633647 85633867 85633648 85633647 85633867 220 TTTGCTACCTGACATCATTATCTACAG------GCAAAACAAATGCACAGATA---GAAAAGGCCAGCAATTAAATGCATGGGTTACTCAATATC-TTTGTGAGCTTTTTAAGTGAAGTAGAACTGAAAGTATTTC--CCAGCAATATCT--------ACGATTTTTTATTATGCT---TTTATGGATGGAGAAATTAAAGCCCAAAGGATTTGCAAAGGGTTGCACAGGCAGTGAGTATCAG ...:.x::..:.:..:...::..::.:------:xx.:.:.....:...x...---:x...x:x:.x.x.:...:..:.x:x:..x::x..x:..-.....:..:x....:::.-------...x...xx.....x--..x.x..:....--------.x.xx..x.......x:.---.....x.....:......:.:..x..:..xx...x...x.:...:.x::x.:.:.:..:..... 27M6D20M3D39M1D18M7I15M2D12M8D18M3D64M 134/213 62.9% 220/94230402 0.0% 30/213 14.1% 45614527 NA +4818 chr4 + 190214555 131261384 131261383 131261544 161 ACATATATATGCAATGTATATAAATACATTATATATACAATACTTATTAATAGTGT-----CTGTGTCCCTTTTGGAATCAAATATAATACAAAAGAGGTATTTGTTTTC-TATTAATTGCTGTCTATGTGCCAAAACATTTGTTACAACTATGGCTTATGGAATAA chr4 + 94230402 27294112 27294111 27294274 27294112 27294111 27294274 163 ACATATATTCACAATGTGTGT---TACAGAAGCT-TACATTTCCCATTAATTATTTTGTAACTGAGTTTCTTTCAACATCAGACATAAAAGTGAAGGGCTTTTTGTTTTTGCATTAATTGCTGTCTTTGTGATAAAGCACTTTTTGCCCCTGTGACTGATAAAATAA ........x::......:.:.---....xx.xx.-....x.x.::......x:.x.-----...x..::....:::x....:.:....x.xx:...:.x.x........:-:..............x....x:...:..:..x..:.xx..:..:..x..::..... 21M3D10M1D21M5I49M1I56M 109/157 69.4% 163/94230402 0.0% 10/157 6.4% 103967272 86247283 +3909 chr4 + 190214555 131268004 131268003 131268120 117 AACATTTCCAGTTACAGCTATTTTAGAAAAATGTTTGGTTTTAAGAAAATAGATATATAAAAATAATATAAAATTTAACTATATATTTTAGTGGAAATTTGGAATATAAGTAATTGA chr4 + 94230402 44862963 44862962 44863078 44862963 44862962 44863078 116 AGCATTTCT-TTCACAGCTAATTTGAACTTACGTCTGGTTTTAAAGAAATATTTATATAGAAATAATACAAAATTGAATGGTGAAATGTAGTGCCATTCAGCTATGTAAATAGCAGA .:......:-x.:.......x...::.xxx.:..:.........::.....xx......:........:......x..:x:.:x.x.x.....xx.x.:x.xx..:...:..::x.. 9M1D107M 78/116 67.2% 116/94230402 0.0% 1/116 0.9% 86405041 NA +3257 chr4 + 190214555 131275738 131275737 131275822 85 TATATACCATATATATACCATATATAGTATATACCATATATAGTATACATACCATAT-----ATAGTATATAGTATATACCATACATATA chr4 + 94230402 26320252 26320251 26320341 26320252 26320251 26320341 90 TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTA ...x.xx...:.......:.:....x:.......:.....:.:....:x..::..:.-----.........xx.xx:..:::..:..:.. 57M5I28M 59/85 69.4% 90/94230402 0.0% 5/85 5.9% 104955486 85259069 +3291 chr4 + 190214555 131359338 131359337 131359408 71 CATGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCGGGATGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::....--.....x....:.:...........::...:....x.xx.x...x.:........x:..x.. 8M2D61M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% 55326141 NA +3206 chr4 + 190214555 131425978 131425977 131426036 59 AAGGGAAGGGAAGGGAGAAGGAAGGAGAGAGAGAGAGAGAAAGAAAGGAAGGAAGGAAG chr4 + 94230402 62475716 62475715 62475774 62475716 62475715 62475774 59 AAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ....:..:::..:..:.::....x......:...........x.....::x.::.:... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 68950262 NA +3803 chr4 + 190214555 131425985 131425984 131426248 264 GGGAAGGGAGAAGGAAGGAGAGAGAGAGAGAGAAAGAAAGGAAGGAAGGAAGGATGGAAGGAAAGAAGGAAAAAAAAAAGGAAGGATGGAGGGAAGGGAGAAGGAAGGAGAGAAAGAAAGAGAGAAGGAAAGAGAGAGAAAGAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAAGAGAAAGAAGAGAGAGAAGGAAGGAAG----------------AAAAGGAAGG--AGAAAGAAGGAC-GGAAGGAAGGAAGGAAAGGAAGGAGAAGAAA chr4 + 94230402 14577289 14577288 14577536 14577289 14577288 14577536 248 GGGATGTGAGATAAAAGGAAGATGAGAGGGATAAA-AGAGGAAGAGAGAAATGGGGAACTGAAAGA--------------GTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGA-------------TGAGCCAGAGTTGAAGAAGACAGCTAAGGAAGG-------GTAAGGGTGTGAAGTGCTACAAAAGCAGCTGGAGAACTACAAAAGCACTACTGTATGCACAAAAAACACAGCTAGACAAAAGGGCTGGTAGGCAGTAATGAAAGGATGAGAAGGAAA ....x.x....x::.....:::x.....:..x...-.:......::..:..x.:x.:.xx......--------------.x...xx....:......:x:..:....x....-------------x..:xx....xx:.......x..xx........-------.x:.::.x.x....x:xx:x:....x..xx:.....xx.x::...----------------....:x.x:.--...x.:....:.-..x...x..x..x.......x.:::.:.... 35M1D30M14D33M13D33M7D45M16I10M2I12M1I31M 151/229 65.9% 248/94230402 0.0% 54/229 23.6% 116848696 73365859 +3167 chr4 + 190214555 131426032 131426031 131426136 105 GGAAGGATGGAAGGAAAGAAGGAAAAAAAAAAGGAAGGATGGAGGGAAGGGAGAAGGAAGGAGAGAAAGAAAGAGAGAAGGAAAGAGAGAGAAAGAAGAGAGAGA chr4 + 94230402 76841585 76841584 76841688 76841585 76841584 76841688 104 GGAGGGCTTGCAGGATGGGTTCAGAGAATACATGA-GGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGATTTTGCGGAGACAGAGA ...:..x.x.x....x:.:xxx.:.:..x.x.x..-...x.:x::.......:..:::............:.......xx.....:..xxxx:x.:...x..... 35M1D69M 68/104 65.4% 104/94230402 0.0% 1/104 1.0% 54584447 NA +4083 chr4 + 190214555 131426059 131426058 131426217 159 AAAAAGGAAGGATGGAGGGAAGGGAGAAGGAAGGAGAGAAAGAAAGAGAGAAGGAAAGAGAGAGAAAGAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAAGAGAAAGAAGAGAGAGAAGGAAGGAAGAAA--------AGGAAGGAGAAAGAAGGAC chr4 + 94230402 49044660 49044659 49044815 49044660 49044659 49044815 156 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGA-----------AGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGC ...:..:..:..xx:..:..xx:.:.:x..xx:..:...x.::x..x......x.xx:..x.......:::....xx..:...:..-----------...:..:x.:...:x.......:...:....x....x.::...--------......::.:..:.x.::. 86M11D43M8I19M 95/148 64.2% 156/94230402 0.0% 19/148 12.8% 82381399 NA +18102 chr4 + 190214555 131442428 131442427 131442851 424 TTGAAGGCAAACATGATTT-ATCTAGTAGTGATCTAGAAGGAATGGAGG-CTGGTCTATTTCCAATAACTGTGTCTATGGAGATGGTGATAATCCCATCTGCACCATTAC-AAAGACT--AAATGTTCACATTCAAAGTTCTAGAATTATGTTACAGATGTCTTTATCTCATTACGTGGTTACTAGGGGGTTGTTTCATCTGGTGTACTTTGATACTGTGTGTACCTT-AACAAGCAATCTGGAATAAGCCTTCTGTTTATAGCACTAGAAAACAGAGCATTGTTATATATCATGGCTACTGTTAATTACACTGTGGTGCAAGACATCATTAAAGCTTGAAATGCT-CAAGGCATGTCAGCAGAATTTG-TTTTACTTAAGTTAAATTACTTTTAAGACTCAGATTTAAATAAACAATATATGTGACAATTA chr4 + 94230402 27332502 27332501 27332919 27332502 27332501 27332919 418 TTAAAGAAAAACAAAGTTGGAAGTATTCATAGTCCAGTGTGATTGGAGGGCTGTTCTATTTCCAGTGACAGAGTCTGCTGGGATGATGATAATTCCGTCTGTGGTATCACCAAAGGCTTTAAATCTTCACATTCAAAGTTCT----------TACAGATGTCTTTACCTCATTACGTGGCTACTGGGGGAATGTCTCATCTGCTGTACTTTGCAACCGGGTGTACCTTTAACAAGCAATCTGGCATTAGCCTTCTGTTTCTACCACTGGAAAGAACAGATTTGTTATATATCATTGATACTGTTAATTACACTGCTGTGCTAGGCATCATTAAAGCTCAGAGTGCTGAAAGGCATATCAGGAGGATTCACTTTTTGTTATGTGAAACTGCATTTAG----CAGCTCAAGAAAACTGTTACAAGTAATAATCA ..:...:x.....x::..x-.xx..x.x:.::..:..x:x..x......-...x..........:.:..x.x....::x.:....:.......:..:....::x:..:..-....:..--....x.................----------..............:............:....:....:x...:.......x.........xx..:.x.........-..............x..x............x..x....:....:x.x..xx..............x.x.................:x....x..:.............:::.:....-x.......:....x..:...::-....xx...x..x...:.:.x....:----...x.:x.:.x..x::x..:.x..:.:...:. 19M1I29M1I60M1I7M2I22M10D76M1I117M1I22M1I26M4D32M 313/410 76.3% 418/94230402 0.0% 22/410 5.4% 104109926 86104629 +3367 chr4 + 190214555 131481248 131481247 131481346 99 GTAACCTAGAACTTAAAGTATAATTTAAAAAATATAATAATAAGCTCTTGGTGTTGACTTCTTTTTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 12818477 12818476 12818575 12818477 12818476 12818575 99 GTAAGTTTGACCCTAAATTGCAATCCAGGATATATAAAAATAAATTCTCTCTCTCTTTTTCTTTTTCAATTTCTTTCCTCTTTTTGCTTATTTTTGAGA ....x:.x..x.:....x.::...::.::.x......x.....::...:xx.x.:xx:........xxx..::...::.:.....x:..x......... 99M 64/99 64.6% 99/94230402 0.0% 0/99 0.0% 118662771 71551784 +9633 chr4 + 190214555 131515762 131515761 131516272 511 TATGTGC-CATTTAACAGCTTTCAGGTGAAATAACTTACCAGGCAAAAAATA---GAATTGACATCCAGCATACTGATGAAAAATAATGGACTTTTTATTCATCAAGCAAATAACAT---TAGAAGCAAG------------CAGCTTAAAAAAAATTTGCTTGAATA---------------------TATTACCATGTATCTTGTTAGAAAATTGTAAACTTC-------CTTTTGAGAAAATTTAGCATTGTTTCTTTCCCTAATCAAAGATGAATTTTTCTAGATTTAGA-----------ATGTTTCATGGATTTTATGAGGGATTT------CCTGTATTTTGTGCT--TTAATCTTTTTTATGACACTTGGAAACCTTGTTTTCATTTTTTTCATTGTGTTTAATAAAACTTAACAGCAAGCAAAGAATCACATTTGAATATCACTGTTGATTGCATTAAAAAAGACAGCATATTCATTTCATCACTCTTT-GCACATGTGTAGAGTTCCTCTGTACCAGGTGGGCATAATTAGGTTGGAATGTGGTTTGGCTGACAAATTATTTCCTATT chr4 + 94230402 27356549 27356548 27357100 27356549 27356548 27357100 552 TATGTGTGCATTTAACAGATTTTGGCTGAAGTAATGTTGCAGGAAATTAGTACTGGAAATGACATCCAGAGCACTACTGAAAAAGCAAGACCCCCAT---CATTGGATAAAAAAAGTGTTTTGAACTAAAAGACTTCCTGCCCAAGTTAAGAAAGCTATGCTTGTGTGCTTTTGGGTGAGGAAACTTTCTATTACT-TCTTTCATGCTCCAATTATTCAGTCTTCTTTCTCTCTCTCTTTAAGATGTATCTTTATTTTCCTTTTTGATACAAAATCTGTTTTTCAAAAATTAATTTACTGTTACTGTATTACATTGACTTTATTATGGACTTTTATCTCAGGTAAGCAGTATTAGTTTATCTTTT-----ATAAATAGAGATCATGCTTC------TGCCAATGTATT-AGTGCAGCCCAGCAGCAACTAAA--ATTACATTT--------TTGCTGATTGCATTCAAAGAGACAGCACATTCATTTCACCTCTCTTAAGCATATGTGCAAAGTTCCTATGCTCCAGGTGGTTGTAATTAGTCTGGAATCCAGTTTGGCTGGCAAATTCCTTCCTGTT ......:-..........x...::.x....:...:x.xx....x..xx.:..---...x..........x::...:x.......xx.x.:x.:::x.---...:::::...x..x:.---.x...x:..:------------..:x....:...:x.x......x:.:---------------------......:-.x.x..x..:.xx..xxx.x:.:x....-------..:.:xxx..:..x..x.x..:...:::.:::.:..xx..:..xx:......x.:.x...:x-----------:.:..x...x..:.....x.x...:..------.xx...xx:x..::.--..x.......-----.:.xx.:..:.:.x..:..:------.x:..x...:..-.:.:x.:.::.:......x:...--..:......--------:..:..........x...:........:..........:.x.....x-...:.....:.:.......x..:x........x::.......x:......x::.........:......x:.....:.. 7M1I44M3I42M3D17M3I10M12I26M21I7M1D28M7I62M11I27M6I15M2I10M5D20M6D12M1D23M2D9M8D47M1I79M 327/485 67.4% 552/94230402 0.0% 93/485 19.2% 104159213 86055342 +3126 chr4 + 190214555 131542900 131542899 131542948 49 GCGACAGAGCAAGACTCCATCTCAAAGAGAAAAAAAAAAAAAAAAAGCA chr4 + 94230402 88382708 88382707 88382756 88382708 88382707 88382756 49 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCA ..:.x:.........xx.x.......:..:.:................. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 43160192 NA +3245 chr4 + 190214555 131544697 131544696 131544736 40 TTTAAAAAAAAAAACCCAAAACAAACAAACAAACAAAAAA chr4 + 94230402 32356420 32356419 32356459 32356420 32356419 32356459 40 TTTAAGGAAAAAAACCCAAAACAAACAAACAAAAAAAAAA .....::..........................x...... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 99188277 91026278 +15074 chr4 + 190214555 131544764 131544763 131545271 508 AATGTAAAATCACTAGATTTAAATGGCACTTAAAAAATAATGACTTTTTTTCTGCAACCAA-GTTTATAAAA-AGGAAATT-TTGGCTCATGGAAAAGAGATGAATGAATATAACTAGACTTCTGTTGGAGAGATTTATGGTATATATTTAGCATCTTAGACAATATAATAAATCACTGCCATAGTCAATGTGAAAAAATACATTAGTTGCCATTTGTTT---------TTCATCAGCCTATCTGGATTCTTTTCAGATGTCATTTTCAAGATTTATATATCAGTGTTATTTTATA-TAATAAAAAGTCTATTGCTGATTATACAAAAGAACTCTCAAATATAAC--ATTGCCATCCTTTTAATTTTGAAGCTGCTCACATGGATACTACCAGCTTCATTGTGAATCACTGAAAAAGAGGACA---CAATGCCA---------------------AGGAATCCAAAGAGAAGGCAATAATGATAAATGCA----AGTTATCACAAATCTCTATGTAGCTGAATATCATATATTGACATTTTCTTTTTAGGT chr4 + 94230402 27365261 27365260 27365797 27365261 27365260 27365797 537 AATGTAAGATCACTGAATTTACCCTGCATTTTATTTATA-TGAGTTCCTTTTTATAAAAAAAGCTTATGAAAGAAGAAATTGTTGGCTCATAGGAAGGAGATGGATGAACATAATAAGGCTTCTGTTTGAGGGATTTATGATGTATATTTAGTATTGCAGACAACATAGTATATCACTGCCGCAGACAATGTG-AAAGATACATTATTTGCCATTTGTTTGTTTGTTTGTTTTTTAACCAGCCTAAGTTCTTTTCAGATATTGTCTTAGAGATTTATAAATCAGTTCCATTTCAAATTATTAAAAAGTCTATTGTGCATTAT--AATGCAGCTCCAAAACATGGCAAATTATTTCACTTCTATTGTTGCAGCCATTAATATT--TCCTCCATATTCCATCATATTTAACCTAGATAGAAGACGTACCGATGCCAGTATTGTGAAAACAACACTGTGAGAGCAAACAGATAAAGTATTTGTGAGAAATGTAATAGATTTATCTCAGACATCTGTGTAAGTTGAAGTTAT--------ATTCTCTGGTTAGGT .......:......::.....xx:x...:..x.xxx...-...x..::...:.::..xx..-.:....:...-.:......-.........:.:..:......:.....:....:x..:........x...:........:.:.........:..:x:......:...:..x.........::..x.......-...:........x.............---------..:x.:.:..x::..:::............:.::.:..x:.........x......x::....:.x.-..x..............:xx.....--..x:x.:...:x...:..::.--...:::x:x...:..x.x...x...:::.x.:..x--.x..x.xx::.:...::.:xx.x..:x.:.x...:...:---.:......---------------------::..::xx.x...x..:.:.x.x:...x.....:.----.x.....x..:.:x...:....:x.x:.x:.:..--------...:...xx...... 39M1D21M1I10M1I8M1I111M1D26M9I67M1I25M2D21M2I35M2D39M3I8M21I35M4I34M8D15M 345/494 69.8% 537/94230402 0.0% 57/494 11.5% 104179503 86035052 +3277 chr4 + 190214555 131551785 131551784 131551874 90 CTTTCTTTTTCTTAGTCTTCTTCTTTTTGTTTTGTTTTGTTTTTTATTTTGGTTTGTTTTTTGTTTTTTGTTTTTACACGAATTCTTGCT chr4 + 94230402 58202205 58202204 58202282 58202205 58202204 58202282 78 CTTGCTTTTCCTTAGTTTTGATTTTTTTGTTTCATTTTGTTTTCCA------------TTTATCATTTCATTTTTGAACATATTCTTGCT ...x.....:......:..xx.:.........::.........::.------------...xx:x...::.....:x..:x......... 46M12D32M 58/78 74.4% 78/94230402 0.0% 12/78 15.4% 73349580 NA +3472 chr4 + 190214555 131557846 131557845 131557909 64 GTCATGTGCCTGTAATCCCAGCTGCTCCAGAGGCTGAGGCCGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x:..::.x....:.:......:..:x.:........x..x.x...x.............:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 55524645 NA +3062 chr4 + 190214555 131590514 131590513 131590565 52 CAGAGTGAGA-----TCCTATCTTAAAAAAAAAAAAAAAAAGAGAGAGAAAAAGAAA chr4 + 94230402 24148887 24148886 24148943 24148887 24148886 24148943 57 CAGAGTAACAATAAGCCTTATTTTAAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAA ......:.x.-----:.:...:....::.....................:...:... 10M5I42M 43/52 82.7% 57/94230402 0.0% 5/52 9.6% 107441627 82772928 +3396 chr4 + 190214555 131591002 131591001 131591091 90 CAGTGT---TCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823245 7823244 7823334 7823245 7823244 7823334 90 CAGTGTAGCTCACGTATTT---TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ......---...::...x.---..:...:.........:.:......x.:.:x.x..:..xxxx..:...x..:..............x:... 6M3I10M3D71M 65/87 74.7% 90/94230402 0.0% 6/87 6.9% 123767757 66446798 +3094 chr4 + 190214555 131591003 131591002 131591093 91 AGTGTTCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC chr4 + 94230402 55892184 55892183 55892274 55892184 55892183 55892274 91 AGTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATAAAACTTTGATACTAGAATTTGTGATTTTTTTTTTTTTGCTTTC .....x:x.:.....x.:.:.x......:....x...:..:...:...x.xx...xx.x:.xxxx...x.xx.............x:.... 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% 75698819 NA +3268 chr4 + 190214555 131591011 131591010 131591094 84 TATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT----TTTTTTTTTTTCT chr4 + 94230402 7823264 7823263 7823351 7823264 7823263 7823351 88 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCTTATTCT ..:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:...----.x:..:..x.... 71M4I13M 61/84 72.6% 88/94230402 0.0% 4/84 4.8% 123767747 66446808 +3560 chr4 + 190214555 131591013 131591012 131591098 86 TATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGTT chr4 + 94230402 7823264 7823263 7823349 7823264 7823263 7823349 86 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCTTATT ..:...:.........:.:......x.:.:x.x..x.xx.x...:...x..:..............x:...xxxx.x:.....:.. 86M 61/86 70.9% 86/94230402 0.0% 0/86 0.0% 123767749 66446806 +3037 chr4 + 190214555 131591023 131591022 131591092 70 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823333 7823264 7823263 7823333 70 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTT ..:...:.........:.:......x.:.:x.xx.:..xxxx..:...x..:..............x:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 123767759 66446796 +3145 chr4 + 190214555 131591023 131591022 131591081 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 98340020 91874535 +3087 chr4 + 190214555 131591040 131591039 131591092 53 ATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077444 47077443 47077496 47077444 47077443 47077496 53 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT .......:......x.....x:...x:x...:.xx.................. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 84513596 NA +3256 chr4 + 190214555 131591042 131591041 131591097 56 ATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGT chr4 + 94230402 47077444 47077443 47077499 47077444 47077443 47077499 56 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTTGGT .......:............x:...x:x...:.xx................:.x.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 84513598 NA +3412 chr4 + 190214555 131596182 131596181 131596353 172 CCTTCCTTCCTTCCTTCCTTCATTCTTTCCCTTCCTTCTTTGCTTCCTTCCTTCCTTTTCTCCCTTCCTTCCTCCCTTCCTTCCTTATATCCTTCCTTT------------------------CTTCCTTTCCTCCCTCTCTCCCTTCCTTCTTTCCTTCC----------------TTCTTTCCTTCCTTCCTTCCTTCTCTCCCTTCCTT chr4 + 94230402 93367684 93367683 93367893 93367684 93367683 93367893 210 CCTCCTTGCCTTGCTCCTGTTTCTCTCCAACTTCTTTCTCCACTTAGTTCATTACTGCTTTCCCTTCCCTGCGCTCCTCCATTCTGTTCTCCTTGGCTTGGTAAAGCTCCAGTTGGTAAACGGCCCAGTTTCCCATCTCTCTGCCTCCATCTTCACCTCTCAGCCCTAATGAATGATTTTTTTCCTTCCTT--TTCCTAATGCTCTTTTCTT ...:.:.x....x..:.:x.:x:...::xx....:....:::...xx...x..x..x:.:........:.x.x.:.:...x.:..xx.x.....xx:..------------------------.::xx.....:x:......x...:.x.::.:x...::.----------------..:...........--.....xx.x::.:..:... 99M24I38M16I14M2D19M 108/170 63.5% 210/94230402 0.0% 42/170 24.7% 38228498 NA +4332 chr4 + 190214555 131596388 131596387 131596598 211 TTTCTTCCTTCCCTCCCCCTCTCCCTTC--CTTCTTCCCTTCTTCCCTTTCTTCCTTCCTTCCTCATATCCTTCCTTCCTTTCCTTTCCTCCCTCTCTTCC----TTCCTTCTTTCCTTCCTTCCTTTATTCCTCCCTCCCTCCCTTCC--------TTCCTCCCTTTCTTTCTTCCTCCCTTCCTTTTTTCCTTCCTTCCC----CTTCTC------------TGTTTCTTTCTTTTTTC chr4 + 94230402 36929148 36929147 36929373 36929148 36929147 36929373 226 TTTCTACCTTTTCCCTCCATTTCCCCTAGAATCCCAACTTTTTCCACGTTTTTCTCTTCATTCTCACAT---------------TTTCCACCCTTTTCCCCAACATTCCCAATTTTTTTCCACCATTTCCCCTGCTTTCCCACCTTTTCCCACATTATCCCCTACATTCTTACATTTTCCCTACCTTTTCTCCTACGTTCCCACGTTTTCTCGTAAATTCCAAACATTTCTTCCTTTTTCC .....x....::.:.:..x.:....:.x--x.:.:xx.:..:.:.x.x..:...::.:.x.:....:..---------------.....x....:.:::..----....:xx...::....x:.x...x::.:x.::....x..:..:.--------.:..::x.x.....x.x.::.....x......:....x.x.....----:.....------------::......:......:. 28M2I39M15D17M4I44M8I45M4I6M12I17M 129/196 65.8% 226/94230402 0.0% 45/196 23.0% 94667240 NA +3258 chr4 + 190214555 131611842 131611841 131611909 68 GTGTGCCTTTAGTTCCAGTTACTCTGGAGGCTGAGGTGGAAGAATCACTTGAACCCAGAAGTTCCAGG chr4 + 94230402 76033204 76033203 76033271 76033204 76033203 76033271 68 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG ...::.x.x.........:....:x::........x:xx:x...x................:.:::.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 55578638 NA +3329 chr4 + 190214555 131616491 131616490 131616551 61 ACAGACACACACACACACACACACATATATATATGTATTTCTTTAAA---------TTTCCCTTTGGATT chr4 + 94230402 18734805 18734804 18734874 18734805 18734804 18734874 70 ATAGACATGTACACACACACACATATGTATACATGTATTCATTTGAATCTGTGTTCTTTCCTTCTGGACT .:.....:::.............:..:....:.......:x...:..---------.....:.:....:. 47M9I14M 48/61 78.7% 70/94230402 0.0% 9/61 14.8% 112881686 77332869 +3154 chr4 + 190214555 131640515 131640514 131640581 67 AAAGACACCAAAACACACACACACACACACACACACACACACACACACACACACACAAACTGTTAGA chr4 + 94230402 74526062 74526061 74526128 74526062 74526061 74526128 67 AAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGA ...:.......:.:x..............::x...:.....x.:.:.:..::.:.:.x::xx..... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 57114453 NA +12153 chr4 + 190214555 131649023 131649022 131649430 408 CACATTAAGGTTATTGCAGGGTGAGGATTACGATATTGTGATATGACTGAAGGACAAATGATTTAAATTCC---TGTTTCTATTTCCTGGTTTTATAGAGGAAAGAAGA-----------TGTTCA----------------AAGAAAGAGGG-----------------------TTTGAAAGCTTAATACTCAATAACAGTCAAAGGTTATTAAAA-TGATGCATATGACAGTGTTATTTGTCTTCTAGGCCTGTCTTGAATTTTTCT--AAATTGTTTGCAATAGAATCAAAAGGCACTTACCAATAATCCATATAAATAATATAAATA-TAAATTCCAGTTTACTGAATCATGTATCACCGACAAGTACTCATGATAATATATGTATTATCTTATTCTGTTCTCTTCATTACGCTGTCAACTTATGTGAACAAGATGCTTTAGTTCTTCAAAGCTTCACAG chr4 + 94230402 27393044 27393043 27393506 27393044 27393043 27393506 463 CATATTGAGAT-ATAGTGAAGTGATTATTAAAATGCCATCATAAACCTAAAAGACATCTGATTTAAATTTCAGATGCTTCAGTTTTTTAACTCTCTTGAGAAGAGATGAAGCAAAGCTTGTGTTTATTTGACTACACAGCATAAGAAAGAAAGAAATTCTATTGAGAGGAATGATATTTGCAATCTTGACATTTGATATTGATCAAAAAGCCTTAGAAGCAACTGGTTTGACATTTTTATTTCTTTTCAGAATGTATCATGCATCTCTCTCTAAATTGCTTGTAATATAATCAGAAAGCACTGACCCATAGCCTACACAAATATCATAAATAATAGATTCCAGCTTAGTGAATCTTGTACTAAAGACGAGCTGGAGTGATAATATATGAATTATCTTATTCTGTCTTCTCCATTATCTTGTCTGTAGATGTG-GCAAGATGCTATGGCTCTTCACAGCTACAAAG ..:...:..:.-..x.::::....xx....x:..::::.x...x:x..:..:....xx...........:.---..:...x:...::.:::.:.x.x...:.:...x..-----------....:.----------------........::.-----------------------....x..x...:.:.:.::...x:::.....::x:x...:..-::.:xx:.x.....x.x......x.:...x::::x.:..x..x..:.:...--......:...:....x.....:..:.....x...x...::.:.:.:.....x:.......-..:.......:...x......x....::.xx...:..:xxxx:............x...............::...:.....:x:....x::xx.....-:.........x.:.:......x....x..x.. 11M1D59M3I35M11I6M16I11M23I42M1I51M2I60M1I99M1D32M 277/406 68.2% 463/94230402 0.0% 59/406 14.5% 104255979 85958576 +3177 chr4 + 190214555 131651025 131651024 131651095 71 TAAATTGACACAATTCAGCATACAGTATTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTA chr4 + 94230402 51392788 51392787 51392855 51392788 51392787 51392855 68 TGAATACACAGAATTCATCGTTCAGTATTTTTCTTTTTCTTTTCTTTTTTCTTTTGTT---AAACACAGTA .:...xx...x......x.:.x..........:..:..:.:..:......:....x..---.:...x.... 58M3D10M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% 80258237 NA +3701 chr4 + 190214555 131689069 131689068 131689170 102 CATGGTGGTGCATGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAACTTCAACCCAGGAAGTAGAGGTTGTGGTGAGCCAAGATCACGCCAA chr4 + 94230402 76033197 76033196 76033290 76033197 76033196 76033290 94 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ..::........:.--.:....:...........::........x.xx.x...xx....x.......:.:x.xx:..:...:.------..x..x.:..... 14M2D67M6D13M 69/94 73.4% 94/94230402 0.0% 8/94 8.5% 55655872 NA +3037 chr4 + 190214555 131696502 131696501 131696570 69 TTTTTTATAGAATCCCTTATTTCTCCAAGGCTTTTTCTTTTCTTTCCTTTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 23975667 23975666 23975730 23975667 23975666 23975730 64 TTTTTTTTGG---CCCTT--TCCACCAAGGTTTTTTTTAACCCCCCCTTTTTCTTTCTTTTTTTTTTTT ......x.:.---.....--.:.x......:.....:.xx:.:::...........:............ 10M3D5M2D49M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 107720835 82493720 +3064 chr4 + 190214555 131697013 131697012 131697057 45 CTAGGCTTGGTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTC chr4 + 94230402 55690041 55690040 55690085 55690041 55690040 55690085 45 CTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCC ..x.::..xx..........:......................:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 76006972 NA +3043 chr4 + 190214555 131697022 131697021 131697064 43 GTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTCAAATGGC chr4 + 94230402 23572662 23572661 23572704 23572662 23572661 23572704 43 GTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTGTAAAGTTGC ............................x....x.x..:.x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 108124360 82090195 +3011 chr4 + 190214555 131697025 131697024 131697061 37 TTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTCAAAT chr4 + 94230402 23869144 23869143 23869180 23869144 23869143 23869180 37 TTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTACAAT ................................xx... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 107827881 82386674 +3015 chr4 + 190214555 131702734 131702733 131702791 58 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACA chr4 + 94230402 1494994 1494993 1495051 1494994 1494993 1495051 58 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...:::...x.:.........x.:......x.x......:.:..:...:.....x.:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 130207740 60006815 +3003 chr4 + 190214555 131702742 131702741 131702789 48 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:......x........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 130207742 60006813 +3095 chr4 + 190214555 131702744 131702743 131702791 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:...:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 130207744 60006811 +6656 chr4 + 190214555 131710615 131710614 131710759 145 AAATATCTTGAGAGCAGTGATACATAATATAT-TATGCAAAACCTGAAAAAAAT--AGTGATTTCCAGCATCAAATGTCATTTATTCTTCTGAGAGCCTAGTGGCCTTTAAGTTAATTTCCTATTTTATGGATTTTTATAAATTACTT chr4 + 94230402 27405676 27405675 27405819 27405676 27405675 27405819 144 AAATGTACTGAGTGAAGCACTCCATAGCATATCTATGCAGAACTGGAGAAACCTCCAGTGATTTTCAGCATCAAAGGTCACT----CTTCTGATAGCTTAGTGGCCTTTACAGTAAATTCCTATTTTATGCATTTTTATAATTTTTTT ....:.x:....x.x..::x.x....::....-......:...:x..:...xx.--........:..........x....:.----.......x...:............x:x...x.............x..........x..x:.. 32M1I21M2I26M4D62M 111/141 78.7% 144/94230402 0.0% 7/141 5.0% 104304939 85909616 +11438 chr4 + 190214555 131768724 131768723 131769059 336 AACTACTGTGGAAATATTTTGTCAGTTATTAACATTCCCCTTTCAGGTTAATATCAAGTCAACAAAAATTT--GGAGTTCTCTTGACCCTTTCCCCAATGTGTAAATTAGTAATATAATGTCAATATTCAGACAGGCAAATAAACTA--AGCTCCCTTTGATGAAAACGACATGCAGTAACGCTTCCCTACTGAGAATCATCTTAGTTTGTGAAATCATAATCTGGAATGGCTATATCTGCAAAATATATTAAAAGAAAGAAAATATCAAAAACATAATCTACAATACTTTTATGTATATC-TAATCATTTTATATTTCTTTTTTATTATACTACTTGAAA chr4 + 94230402 27427666 27427665 27428002 27427666 27427665 27428002 337 AACTACAGTGTCAAA---TTACAAGTTATTAAAAATTCTATTTCAAGCTAATATCAAGTCATCAAAAAAAAAAGGAATATTCCTGACCCTTTTACCAAAGTGTAAATTAGCAGTCTAATGGCATTATTCAGATGTGCAAAAGAAATATAAGTTCCTTTTGATGAAAATAATATAAGAATGTGCTTCACTACTGTGAATCATCCTAACATGTGAAATAGCATTTTGGTACAGTGATCTCTGCAAAGGGCATAGCAAGCTGGAAAATATGGGAACAAAAGATGAAGACAATTTTGTGCATCTCTTGCTAATATTTTATTCCCTTTTTATT-TATTACATAAAA ......x...xx..x---..::x.........x.x.:.:x.....:.:.............x......xxx--...:.x:..:.........:x....x...........:.:.x.....x..x........::x.....x:..x..--..:...:...........::.:..:x::xx::.....x......x........:..::x........x::.x.:...x.::.:x..x........:x::..x:x...xx:........x::..xx.x.:x:x.x:.:.x....:..:..x..-.:x.x..x..x....:.:........-..:...x.:... 15M3D53M2I74M2I152M1I26M1D12M 229/332 69.0% 337/94230402 0.0% 9/332 2.7% 104341058 85873497 +6584 chr4 + 190214555 131770026 131770025 131770173 148 AAAACTGTTTATTTACCAGTTTGGTGGCTACCATGCTAATTAGATCATCTGTTTAAAATGTGTCCATATGGACAATTTTTCTGTAAATGTTTTCTTTATGTCCATATTGTGTGGTAGTATTTTCATAGAACCAAGTAGAAATTAACTT chr4 + 94230402 27430654 27430653 27430800 27430654 27430653 27430800 147 AAAACCTCTCCTGCATCAGTTCATTGGGCATTATGATAATTAGATCATCTGTCTAAATAGTGTCCATATGGTGAA-TTTTCTGTAAATGTTTTCTTTATTTGAACAAAGTGTATTAATCTATTTACAGATCCACATTGAAATTAACCT .....:x:.:x.x:.:.....::x...x:.::...x................:....xx............xx..-.......................x.xx.:.xx....:x..:.x.x..:.:...x...x:.x.........:. 75M1D72M 108/147 73.5% 147/94230402 0.0% 1/147 0.7% 104339372 85875183 +3086 chr4 + 190214555 131771316 131771315 131771378 63 AAAACAAATAAACAAAAAAAAAAGAATGATAGAAGTAACATTTCCATTGTCCT-ACAACAGTTT chr4 + 94230402 61374650 61374649 61374712 61374650 61374649 61374712 63 AAAACAAACAAACAAAAAAAAAACACCAAAAAAAGTAAC-TTTCCCTTGTTTTAAAAACAGTTT ........:..............x.x::.x.:.......-.....x....::.-.x........ 39M1D13M1I10M 51/62 82.3% 63/94230402 0.0% 2/62 3.2% 70396666 NA +3006 chr4 + 190214555 131772910 131772909 131772963 54 TTGTTGTTTGTTTGTTGTTTTGTTTTTTTCTTATTTTTATCCTCATACTGAGAA chr4 + 94230402 78297720 78297719 78297773 78297720 78297719 78297773 54 TTGTTGTTTGTTTATTTATTTGTTTTTTTTTCCTGCTTAGTATTATACTGAGAA .............:..xx...........:.:x.x:...x:x.:.......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 53475190 NA +3163 chr4 + 190214555 131776082 131776081 131776145 64 TTTTCCTCCTATATTCTTTTCATGCACCATCTTTCTCTGTGTGTTTTGTTTTGTTTTACTGTCA chr4 + 94230402 39923809 39923808 39923872 39923809 39923808 39923872 64 TTCTCCTCTCCTTTTTTTTTAATGGCCTCTCTTTCCTTCTGTGTTTTGTTTTGTTTTAATGCTA ..:.....::x.x..:....x...xx.:x......::.x...................x..::. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 91852273 NA +3397 chr4 + 190214555 131788956 131788955 131789062 107 TGGTTAAAAAATCACTGTTGA--TTATATTTTGTCTGCACTT---AGTTT------TTATT----------TGTATGTGTGTGTTTTTGTTTTTTGTTTGTTTGTTTTGTAAAGAATTTAGTTTAGTT chr4 + 94230402 16364220 16364219 16364347 16364220 16364219 16364347 128 TAGTTAACaatttattatttaagtaataatttaaatGCGCTTGCAAGTTTGGTCTTTTGTTGTCTCTGGGGTGTTTGTGTTTTTTGTTGTTTTTTGTTTGTTTTTTTTTTACATAATTTAATTCAGTT .:.....x..x.:.:.:..x.--.x...x...:xx...:...---.....------..:..----------...x.....x.x..x.................x....x..x.x......:..:.... 21M2I19M3I5M6I5M10I57M 83/107 77.6% 128/94230402 0.0% 21/107 19.6% 115424736 74789819 +7471 chr4 + 190214555 131801345 131801344 131801733 389 AGAGTTAAAGGAAACTATGGTAATAAAATAAAATATTAATTATTTCAAAAGAAAAAGAGAAAAATTTGTACACTTAATTTAAAA------TTGTTTTCAGTCTTATTTTTGCAAGCAATTTACCAATAGATT---------TGTAATGCACAGTAATGTTGAATGGGTATTGAAGCTATTGAAATACA-GAAGTAAGTT--AGTTTTTCATTATGCTGTGAGTGATGTCCTGAAACACATTAACTTGATATTTTATCTATTGTTTAATATAATTCCCCATGAATTACATATAATGGTAATAGATTAATATCTTTGGAAGTACTGTAAATAATTATATAATTCAGCCAGGAATTACCTTGC-----------TCATTTGCTAACATTATTATATTCTTTCAAAAGCAAATAGCAAAAAT chr4 + 94230402 27449179 27449178 27449573 27449179 27449178 27449573 395 AAAGTCAAAGGGAG-----------AAGCAAAGTATCGATCAGATTATAA----AGGAGAAATTCTCACAGGCCTAACAGAAAAAAAAAATTGTTCCTAATTTT--CTCCATAAACTTCTTGTCATTATACTATTGAGTCATGTAATGTT--GTTTTGTTGAAGTGAAAGTGAAGGTGTTAAGTCAAAAGAAGTAATTTTAAGTTTTTAATTATTCTACAAGTTATGCCCTACAGCACATTTTCTAAAAATTGTACCTTTTGTTCAGCACTAAACTGCATGAATTACTTATAAGTCTGGCAGATCAATATCTCAGAATGTCTTACAAATAATAATTTAATTCAGCTGGGATTTCTTTTTCGTTGTTGCACTTCATTCACCAAC---CTTTTATTCTTGC-ACTGTTAATAGCTAAAAT .:...:.....:.:-----------..::...:...::..:.xx.:.x..----.:......xx:.:::.x:.:...:xx....------.....:::.:.:..--:.::::..:.xx:..::..x..x.:.---------.......:x--..xx.......xx.:x.x.....x.:..:.:x:.x.-.......x..--.......x.....x..:::...x...:...:x.:......xx..x:.x...x..:..x.....:.::.:x.xx.:x..........x.....xxx.:::....:.......:x.:.x..x:.::.......x..x.........::...x..x::..x.-----------.....::.:...---x..x.......x.-.xx.:x......x..... 14M11D25M4D30M6I14M2D26M9I9M2D36M1I10M2I159M11I12M3D13M1D18M 240/366 65.6% 395/94230402 0.0% 52/366 14.2% 104352166 85862389 +3012 chr4 + 190214555 131824536 131824535 131824579 44 ATTAAAAAACAAACAAACAAAAACACATAAACAAACAAACAAAC chr4 + 94230402 79917570 79917569 79917613 79917570 79917569 79917613 44 ATTAAAAAACAAACAAACAACAACACACACACACACAGAAAAAC ....................x......:.x...x...:.x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 51906966 NA +3054 chr4 + 190214555 131831277 131831276 131831388 112 AAAGGTTTCTTCATTCTGTAACTGTCAATATGCTAATATTTTTGTAAATATCCAAGAGGAAGCTAAAGCATATAATATTCCAAAATTTATTTCTGTTT--GTGGATATTATGTT chr4 + 94230402 90028557 90028556 90028670 90028557 90028556 90028670 114 AAAGCATTCTTCATTCTGTAAATATCAAAATTATCCAGCTATTACAAGTAGGTAAGAGAAAGTAATAGAAAATAATAATTCACAATAAATTGCTCATTCAGTGGAAACGAAGTT ....xx...............x.:....x..xx.xxx::.x..::..:..xx:.....:...:x.x..x.x......x.:..x...xx...x..xx..--.....x.:x.x... 98M2I14M 75/112 67.0% 114/94230402 0.0% 2/112 1.8% 41802720 NA +13411 chr4 + 190214555 131835293 131835292 131835675 383 CTCACTTTATTTACTCTTCAGTGATCTAATGCCAATAATGCCAGCCTATAGAAACAACAGCCGATTATAACAAAAAGCACATTAAAAAGTCAAATATAGCTGGGTAATAGACATAAAAATACCTTATTAACA-TTTTTATAACACTCTCAACTGAAATAAACAGACCACTCTCAATTTTAGCATCTGGTTCCAAACAATTCTTGTTTGGGTGATAACTTTTTAAAA--ACAAATGCTGGGCATCTTTC---ATCGACTTTT-CATCAAGTAACAGCTGTTCCTTTAGAACAAAATGTATGCATGTTGGAAGTGTGACTGATGCTCACTTCTGTTTTGTTCTGTGTGAGAAAGCTTTATGTTGGGTGCAATTCAGAAA-ACAAATGGTTTCC chr4 + 94230402 27452617 27452616 27452972 27452617 27452616 27452972 356 CTGACTTTGGTTACAGTATAATGATTTAATACCAAGAACATCAGTCTATA-----------------------------------AAAGTCAGGTAGAGAAACCCAAACCACATAAAAACACCTGATTAACACTTTTTACAGCACTTTCTTCTGAAATGAACAGTCTGCACTGGTTTTTAACATATGGTCCACAACAATTCTTGTAAGAGTGATAACTTCTTATCTTTGCAAACACTGGACATTTTTTTCAATCAGCTTTTTCATTCAGGCACAGCTGTTGCTGCAGAACAGTGTGTATTCATGTCTGAAGTGTAGCTGATGCTCACTTCTGTTTATTTCTACATGACATCACTTTGCATTAGATGCAATTCAAAAAGACAAATGTCTTCC ..x.....:x....xx.x:.:....:....:....x..:::...:.....-----------------------------------.......::..x..xx:xx:..xxx.........:....x.......-......:.:....:..xx.......:.....x.::.x..x:x.....:...x....:.xx............xx.:..........:...xxx--:....::....:...:...:---...::.....-...:x..xx.........x..x:......:x:.....x.....:x.......::...................xx....:::...x.xx:....:::..:.:.........:...-.......x:.... 50M35D47M1I93M2I20M3I10M1I115M1I13M 254/348 73.0% 356/94230402 0.0% 43/348 12.4% 104382676 85831879 +3154 chr4 + 190214555 131841300 131841299 131841400 101 TTCTTTCTTTCCTTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTT-------TCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTT chr4 + 94230402 63697119 63697118 63697239 63697119 63697118 63697239 121 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x..:..:.......:----..:.:.....:....:.:x..::.:.x....xx.....---------....x:..:..-------.:.:...:..:.....::..::...:::...x... 17M4I38M9I11M7I35M 70/101 69.3% 121/94230402 0.0% 20/101 19.8% 68144181 NA +3509 chr4 + 190214555 131841302 131841301 131841436 135 CTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTT------GTCTTGAGCCTTTACTTTTTCA------CAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:.::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....------x....xxx:....x:..:..:x------.xx.......:..:...:..:.:.....::....:.x... 61M6D22M6D40M 80/123 65.0% 123/94230402 0.0% 12/123 9.8% 68144185 NA +3235 chr4 + 190214555 131841312 131841311 131841457 146 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTTTCTCTCTCTCTTTCTCTATCTT chr4 + 94230402 67728277 67728276 67728422 67728277 67728276 67728422 146 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTAC-CCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCT .....x:..x....:....xx:.::..:x.......x.x...-.x::.....:...::::..x.x::...:::x.x.......:.x.-::x.:.x..x..x..::.x:.x:.:..:.:x....:.x.:.:xx:......:::...:. 42M1I44M1D59M 85/145 58.6% 146/94230402 0.0% 2/145 1.4% 64113035 NA +3551 chr4 + 190214555 131841315 131841314 131841440 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx:...:x.::.xxx::.:.x....:.:x.xx........:::::::......:....:......x.:. 13M3D110M 75/123 61.0% 123/94230402 0.0% 3/123 2.4% 68144198 NA +3790 chr4 + 190214555 131841328 131841327 131841462 135 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT------------------TTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTT-----TCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTT-TCTCTCTCTCTTTCTCTATCTTTCTTT chr4 + 94230402 50176267 50176266 50176425 50176267 50176266 50176425 159 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCT .....x...:x..x:::.:.......:....x.------------------........x.::.::x.x..:x...:.x...:...........-----:.:x:....::x.:..:..x....:.......-.:....:::.x....::.:x.x..::. 33M18I43M5I32M1I27M 90/135 66.7% 159/94230402 0.0% 24/135 17.8% 81665061 NA +3111 chr4 + 190214555 131841348 131841347 131841483 136 TTTCTTTCTTTCTTTCTTTC-TTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTT---TTTCTCTCTT----TCTTTTTCTCTCTCT----CTTTCTCTATCTTTCTTTCTTTTTCTTTCTTTCTTTTTT chr4 + 94230402 67728277 67728276 67728424 67728277 67728276 67728424 148 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCT .....x:..x....:....x-:.....:x.......x.x...x:x...:.:...:..:.::.x:x.::....:---......:..x----...x..x..x:::..----.....:.:.....::x::.:xx.......:.:x.::.:. 20M1I52M3I10M4I15M4I39M 87/136 64.0% 148/94230402 0.0% 12/136 8.8% 64113071 NA +3233 chr4 + 190214555 131841379 131841378 131841450 72 TTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTTTCTCTCTCTCTTTCT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT .......::..x..:...........:..:.:.:.:.x..:::x......x.:x...::...x...x.:.:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 62678032 NA +3100 chr4 + 190214555 131841411 131841410 131841507 97 CCTTTTCTTTTTCTCTCTTTCTTTTTCTCTCTCTCTTTCTCTATCTTTCTTTCT------------------TTTTCTTTCTTTCTTTTTTTTTTTTTGGCAGGGTTTCACTCTT chr4 + 94230402 72001428 72001427 72001542 72001428 72001427 72001542 115 CCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTGAAATACCCTCCCCATCTGCCTTTCATTTGCTTTTGTGAGATTTTTTTTTT ....::...:.x...:..x.:.....:...........:.:.x.:.:..:....------------------:.::.:x...x:....:x...x:...x.:::.:...:x:.:.. 54M18I43M 63/97 64.9% 115/94230402 0.0% 18/97 18.6% 59839983 NA +3111 chr4 + 190214555 131841450 131841449 131841504 55 TCTATCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTGGCAGGGTTTCACT chr4 + 94230402 6554016 6554015 6554070 6554016 6554015 6554070 55 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACT .:.:.:x....:...:.:...:...:.:...............:...:x.x.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 125287434 64927121 +12688 chr4 + 190214555 131855939 131855938 131856244 306 CTTTTTTAAAATCAGCTCAAAAGGAGAAGCTAAAATATTCAGCTTTAATTTCACCAGTAGATTTTTAATGTTTTGTAATCATAATGTTTAATTTGTGCTGTTCTTAGAAGTTTAATTATGAAGCTAAATTGTACTAATACCCATTAGGTACTTCTTAATTGAAGGCGCATCATATTTCTGATGTGGCAGTACTAATTGGTGTAATTAAATTCTAATATGCTTCAGTAGCCTGATTTTTTAAAGTGAATAAAAAGCTGATAGAAATAAGTCAGCTCTTGAAGCTGCATAGTTGTATAATACATACAC chr4 + 94230402 27457432 27457431 27457726 27457432 27457431 27457726 295 CTTTTTTAAGACTGATTTATAGGGTCATTTTAAAATACTCAATTTCAGTGCCATCAATGTTGTCTTAATGTTTTATAATCATAATGTTGAATTTGCACGTCTCTAAGAACTTTAATTACAAACCTAAACTGTACTAATATATATTAGGTACCTCCTCATTGAAGCTACATCATATGTGTGATGTAGCACTACTAATTGGTATAATTAAATTCTAATATGCATCAGTAAACTA---TTAAAAAGAGAGTTAAGAAC--------AGAAGTCAGTTTGCAAAACTTCTCACATCTAAAGTACTCATAC .........:.:::::.:.x.:..xx.xx:.......:...::..:.:.x:..:..:.:xxx.:..........:.............x......::.xx:...x....x........::..x.....:..........:x:.........:..:.x.......x::........x.x......:...x...........:...................x......:x..:---..xx....x..:.x..:.:.--------.x.......:.:x::..:..x.x:.xx.x..x.:...x:.:.. 232M3D20M8D43M 211/295 71.5% 295/94230402 0.0% 11/295 3.7% 104398507 85816048 +3229 chr4 + 190214555 131870009 131870008 131870100 92 GCCAGTTAAACCAGAAA------GAAAAATCTTACCAAAAAGTTTCCACTTAGAAAATTTAATAGCCAAAAAAACTAATATATGCAAGAATGAGCAAA chr4 + 94230402 5099180 5099179 5099256 5099180 5099179 5099256 77 GCCAGTTAAAACAAAAACAGAACAAAAAAACCCCCCAAAACGTTTCCACATAGAAAATTTAAT---------------------TAAGAGTGAGCAAA ..........x..:...------:.....x.::x......x........x.............---------------------:....:........ 17M6I40M21D14M 60/71 84.5% 77/94230402 0.0% 27/71 38.0% 126770829 63443726 +3503 chr4 + 190214555 131877388 131877387 131877453 66 GTGGTGCATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATAGCTTGAATCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--....:.:............:........x.xx.x...xx:......:....:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 55844187 NA +4579 chr4 + 190214555 131887979 131887978 131888083 105 GTTATTTTTAATGTTGAATCAATCATACTCTGACCTTCTCCATAGGAAAAGAAAATGTAAATATCCCAGACAGCAGAGAGCAAACTGTCAT-AAAAATAAAACTGT chr4 + 94230402 27467748 27467747 27467853 27467748 27467747 27467853 106 GTTATTTTTAATGCTTAATCCATCATTTTGTGACCTTCACCGTGGAAAAGGTAAATGTAAATCTTTCCAATAGCAATGAAACAAATAAAATGAAAAAGAAAACTGT .............:.x....x.....x:.x........x..:.:.:...:.x..........x.::.x:.:....:x..:xx..x.:xx..-.....x........ 91M1I14M 77/105 73.3% 106/94230402 0.0% 1/105 1.0% 104420231 85794324 +3271 chr4 + 190214555 131898295 131898294 131898379 85 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGAA chr4 + 94230402 76033197 76033196 76033279 76033197 76033196 76033279 83 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA .:::......--...x......:...........::........x.xx.x:..xx:.x.........:..x:xx:.x:..:.... 10M2D73M 58/83 69.9% 83/94230402 0.0% 2/83 2.4% 55865098 NA +7657 chr4 + 190214555 131909892 131909891 131910157 266 AAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCGAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTGTAGCATAGTTATAATTTAAATGC-TGTGGCTTTATAGAATTTAAAGGTAGGGTCTGTTTATTATTAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGCTCTGGAACAGCACATTATTTATGTTTGCTAATAATTTATTT chr4 + 94230402 27471849 27471848 27472098 27471849 27471848 27472098 250 AAGCTGTCATTATTTAGAATGGATCATTTAATTAACCTACCACAGGGTTTGCAACTAAAATTAATCAGTGCAGGTATATTGTTTGTGTGAGTCACAATTACCAAGTAAATATGTTACTGCCAAATAGAGTTGATGAAATCCAACTGTACATAGTCTCTTAGAATTTAGGGACAAGCTTTGTTTACTCTTAATTATACTTAATGCCATTTACTTC----------------GACTAGCCCGTAGCCTGTG-TTGCTACTAATTGATTT ...x.x........x:......x............x.:.:x::x.xxx:.x.:.x..x.......:....x..........:..x.:..:.x:.:.....x:.:.x.....x........:xx:...x:.x.x.:x...::..x..:-::.:.::.:x.........::.::.:.x.:......:.x........:.:.xx:::...:..x:..----------------..x:...x.:.x:::.:..-......x.....x.... 147M1I66M16D19M1D17M 164/249 65.9% 250/94230402 0.0% 18/249 7.2% 104438043 85776512 +11231 chr4 + 190214555 131920759 131920758 131921217 459 GGTTATAAATTTCTTATTCCTCTTGTTGTTGTTTGGGATGTGTATTTGTGTGTGTGTGCACATATACATATTATTGAATTTACTACATTACTCCAAAGGCTTTTCTTTAACTATTTTGCTTGATGTATATTTAACAGTGATAGTCTCAAACAAACAAACAAAAAACAGGAACACATCTGCTTTTTCACCAATACTGTTCATAGAATGAATCTGTATAGCAGTCTGAGGCTATTCTGATGATAAATTAATTATAGGA--CTAGAAAAAAC--TATTTTGCCATTTTACAAACTCTCATTATGC-ACCTTATATAATAGTGCCAAGTTAATAAA----TTTGCGTCTATGTTTATAGTCTGCAATTGAAAAAACTTA----CCAGGTACT-----ATTTTCCAGATGAAAGTGAAAGTGATGACAGATT----TTATTTCTTCACTTAAATTATTAAGATATACTTTTAACATGTGAGCATAA chr4 + 94230402 27479487 27479486 27479914 27479487 27479486 27479914 428 GGTTGTAAATTCCATATTCCTCTCATTGTGTTTT----------------------------------CATT-TTTAATTTACTACAATCCCCCAAAGGCCTTCCTTTAACTATTTTGCTTGTTGTAAATTCAGCAGTGATATTCTT---TAAACAAACAGAGGCACAGAACA----TAATTTCCTGGTAACACTGTTTAGAAAATGGATCAGATTAAAGACCCAAAGCTATTCTGATGATGAATTAATTATGAGATTCCAGGAAAAACAATACATTGACACTTTACAAG-TTTGGGAATGCAACCTTGTATAATGTTG-AACACTAATAAAGGATTTT---TTTATGCTTATAGTATG-AAT---AAAGACGTAGCTCCCTAATAATCAAAAATGTGTCAGC--AAAATGTAAATAGTAACTTCTTATGCTTACTTCTCCATTTAAATTATGGAAATCTATCTTTATTTTGTAAACAGAA ....:......:.x.........::....xx...----------------------------------:...-..x...........x.x.:........:..:..................x....x...:.:........x...:---:.........:.::xxx:.....----.:x...::::x:..:......:.x.:....:...x.xx..:x:::.::.:..............:..........::..--.:..:......--..:x...x..:.......:-.:.x:xx....-.....:......:x..-x.x::.......----...---.:....:.......x..-...---...:..x..----..x::..x.-----..x.x:...x--...:..x..:.::.:..xxx..----...:....:..:.........x:.:..x..::....x:x...:.:..x.. 34M34D4M1D74M3D23M4D79M2I11M2I19M1D11M1I16M1D12M4I3M3D17M1D3M3D9M4I9M5I10M2D22M4I50M 295/406 72.7% 428/94230402 0.0% 75/406 18.5% 104441272 85773283 +8185 chr4 + 190214555 131944143 131944142 131944340 198 ATTATGTAATAGTTTTTATGCATTTTGTTCATAGGTTACTGGGTGCTTTAAGGCAAAAC-TGAATGAGTTTCCAATAGTCAGTACAAAACTACGAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATAACCTTTTTTACAATGTGTAGATGCTCAAAGCAAATACAA chr4 + 94230402 27487853 27487852 27488051 27487853 27487852 27488051 199 ATAATGATACAATTTATATTCCTTCTAGATCCAAATTAGCAGGTTCTTTGAGGTAAAATGTGGATGAATTTCCCGTAACCAGACTGAAGTCACAAACAAGATAGATAAAAAGTGCCTGCGGTTATCTTCAAATGAAGTTACATTGCAATTGTGTCCAATATTCTTTATTACAAGGTGAAGACACTCAGAGCAAATAGAA ..x...xx.:.:...x...x.x..:.:xx:x:.::...x::...x....:...:....:-..:....:.....x:..::...xx::..:::..:.:x..x.:...:.x..........x.......:.............x...xx.....::.:.....x:....x......x...x...::....:........x.. 59M1I139M 137/198 69.2% 199/94230402 0.0% 1/198 0.5% 104456290 85758265 +3001 chr4 + 190214555 131951927 131951926 131951974 48 TTAATTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGAGACG chr4 + 94230402 62526016 62526015 62526063 62526016 62526015 62526063 48 TTGGTTTTTTTTTGTTTGTTTGTTTGTTTTAGTTTTGTTTTGGTGGTG ..::.....x....................:x.........x.x.::. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 69425911 NA +3049 chr4 + 190214555 131961476 131961475 131961524 49 GCTAGACTCTGTCTCAAAAAAAAAAAAAAAAAGAAAGAGAGAGAAGAAA chr4 + 94230402 66310849 66310848 66310897 66310849 66310848 66310897 49 GTTAGACTGCGCGTTTAAAGAAAAAAAAAAGAGAGAGAGAGAGAAGAAA .:......x:.:x.:x...:..........:...:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 65650627 NA +3641 chr4 + 190214555 131962581 131962580 131962663 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:...........::........x.xx.x...xx:...........:..x:xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 55929384 NA +3335 chr4 + 190214555 131962758 131962757 131962837 80 AAAAAAGAAAAAAAAAATGTATGTATATATATATATATATATATATATATATATATATATATGCACGCATAACCACATTA chr4 + 94230402 85548420 85548419 85548494 85548420 85548419 85548494 75 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT-----CAGACATGGATATCCATTTTA ......:......:.:x.:.......:.:.:.::...:..........x.....-----:.x:..:.x...x...:x... 54M5D21M 55/75 73.3% 75/94230402 0.0% 5/75 6.7% 46414338 NA +3050 chr4 + 190214555 131966999 131966998 131967062 64 TTTTTTTTTTTTTTTTTTTTGAGATGGAGCCTTGTTCTTTCACCCAGGCTGGAGGAGTGCAGTG chr4 + 94230402 9154477 9154476 9154540 9154477 9154476 9154540 64 TCTTTTTTTTTTTTTTTTCTGAGAGCTAGCTCTGAGCTTTCATGCAAGCAAAATAAATGCAGTG .:................:.....xxx...::..xx......:x..:..x::.x:.:....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 122812522 67402033 +3121 chr4 + 190214555 131979324 131979323 131979378 55 GAAAATATGTTACATATATATGTGTGTGTGTGTGTGTGTGTATATATATATAATA chr4 + 94230402 24523902 24523901 24523956 24523902 24523901 24523956 55 GAAAATACAACAGGCATATATATATGTTTACTTGTGTGTGTATATATATATAATA .......::x:.x::......:.:...x.::x....................... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 107455422 82759133 +3224 chr4 + 190214555 131979774 131979773 131979852 79 GTGGCACATGCCTGTAGTCCCAGCAACTTGGGAGGCTGAGGCACGATAATCACTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:.....x.....::........x.x:.xx..x..........::.:..x.xx:.::..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 55946573 NA +12188 chr4 + 190214555 131983106 131983105 131983522 417 TTTTAAATTTCCAATATATTTAC------------CAATATGACATTATATTAGAAGCTCATCACTAT-CTTTTTCTTTTTAAGCAGTAGTATTTAACAAAATAAA--ATGTTAGGCTGTGTATTT-TAGAAAATAAAATCAATTAAAGTAAACCATTAATTAAATTCAGTAGATGTGAAA-TTAGAAATAATAATATGAAGTATTCAGGTATTGCA---TGCCCATAGCAGTAATTTGATCTCTTATGAAATTAAATTTATTTAACCAAAAGACCATAGTTAACCATACCACATGATGAAATCAAGAATGAAATTCTAGGCTATTAATAATGAAATGCA-TGCAATTAAATTTTATTGATTACTGTTAT-----GAAGTTTCAAATTAAACTATTAACCTTTCTTTTATTCATGCCTAATGCATTACTTCAATTATATAAAA chr4 + 94230402 27496409 27496408 27496825 27496409 27496408 27496825 417 TTATGATTTTATAATACACTTACTTTACATCAGCGCACTTCGGTATTCT----GAATCATATCATCATGCTCCCTCAGTCCAAGTAGTTCTACTTGAGAGCATAAAGAATATCAGCTTATGTCTTCCTCATGCATAAGATTGATCAAAGTAAGCCATTAATCAAAT-----AGATATGAAAATTAGAAATAATAATATGAGGTGTT-AGATAACACAATCTGCATGCAATAGCAGCTTGATCTCTCAGGAAATTAAAATAACTTAACAGAAAGGCCATATTTAAC-AGACTGCATGATGGAATTAAGAATGAAAATCTAGCCTATTAATCATGCAAGAAATTGCAATTAAATTATATTTGTTAATTTCATAGTGAAGAGTTTTTAATTAAATCATTAACCATT----------TGCTTGAGT-----CTTCAATTCTATGAAA ..x.:.x...x:....:.:....------------..x.x:.::...x.----...x.x:....::..-..:::..xx.::...:...xx..:..:.x.:x.....--..:.:..x:.:...x..:-.x:x:x....:..::..:.......:........:....-----....:.....-..................:..:..-..:..x::..---...x:::.::..:.::.........:.x.........x.x.:.....x:....:.....x.....-.x..::.......:...:..........x.....x........x...x..x:x.-............x....x:...x.x.:..-----::.....:x.......::.......x..----------...:.:.xx-----........x...:... 23M12I14M4D15M1I37M2I18M1I39M5D10M1I24M1D10M3I65M1D54M1I29M5I28M10D9M5D16M 284/391 72.6% 417/94230402 0.0% 52/391 13.3% 104486697 85727858 +6945 chr4 + 190214555 132023262 132023261 132023443 182 TAATTAGTTAATAGCATGGTGACTTTCACTGTTCAAGTGTAAGGCAACCTCAAAGAGAGTGGCTGGCCTATGATTTAAGTAA-------TCTATTCCTATCTTAGCTCATTTACCTGATGTCTGATGCTAAGTCAAGTAAA-AAAATTGGTTATGCTCTTGTAATGGGTAAACATGGCTGGCATACTTAA chr4 + 94230402 27509153 27509152 27509339 27509153 27509152 27509339 187 TAATTAGTTAAAGATGTTATAACCTTCACCATTGGATTATAGGGCAATCTGTGACAGAGTGGTTG---TATAAAAATAGAAAAGGCTCTTCAATTTTAATCTTACCTCATTTACCTTTTGTCTGATGTTAAATCAAGTAAGTGAAACTGGTAATGTCCTTGTGACAAGAAGGCATGGCTAGCATTCTTAA ...........x::::.x:.:..:.....::..x:.x.:..:.....:..xx:.x.......:..---...:.xxxx..x..-------..x...::x......x...........xx.........:...:........:-:...:....x...::.....:.:::.x.::.......:....x..... 65M3D14M7I52M1I48M 127/179 70.9% 187/94230402 0.0% 11/179 6.1% 104514109 85700446 +3037 chr4 + 190214555 132027831 132027830 132027905 75 AAGAAATAATAAGAACTTTAGCAGAAAAGCCTTACAATTCTATTTGTTTAAACAAATTAAAAGGATTTAAGTATG chr4 + 94230402 5748992 5748991 5749066 5748992 5748991 5749066 75 AACAAATAATCACTATTTAATCTGGAAAGCTTTACTGTTCCATCTTTGTAAACAAGTTAAATGAATTTGGAGATG ..x.......x.xx.:..x.x.x.:.....:....x:...:..:.x.x.......:.....x.:....:::x... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 126278839 63935716 +3023 chr4 + 190214555 132030689 132030688 132030742 54 TTCTTTGATTTCTTTTTCTTTCCTTTTATTCCTTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507627 80507626 80507680 80507627 80507626 80507680 54 TTATTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTT ..x...:......x:...:.:::.x:.........:..........x.:..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 51523062 NA +16153 chr4 + 190214555 132039926 132039925 132040530 605 ATGGAATTTCTTCTTCTAATAG-AGAACACACTTCAGTTAATACTCAATTTGACATTGTGTACACCTGAGGACCTTCAATAGACAACTAATTTAGAAAGCTGATTTTCTGAAGACAAACTAGAGAGTAAATTATTAAAG-CAATTATCTGTAAATGAGAAGAGAGAAATCTTAAATCCCTTTTATCTAAATCTCAAGTGGTTAATACATGACTCTGCATGAATCAAAAAAGATTCTTTGGATTTCCAAGCTGACTTCATCTGGAAAACTGAATTTGCCC--TTCAAACATA----TGTTTTGGAATACAGAGAACAACAACAAAACCCAAAATATCTTTTGCACTTTTTACATTTAGTGA--ATATTATTGCTTTGATAGTAAAAGTACATAAAAGTACATAGAAAAATAACAGTTTGAAAAATGACGCAAAG-CAAGTTAGAATACAAAGGTATTATGAATTTTGCACCTGTTCTAATTTGCTCTATAACATACAACTGATAA---CTTTTAATTGATTTAATA-CTGACTTTCTTTTGAATAC----GGTCCAGATTTGA-----------TTTTTAAAGCTTTAATGAAAATT---GTTAAATGACTGTAATTATGTTTCAGATTACCTGGTTAG chr4 + 94230402 27521662 27521661 27522280 27521662 27521661 27522280 619 ATGGAATTTCCACTTTTACTAGTAGAATGAACTTTTGAAAGTGTTTAATCATAGATGTTGTGCTCTGGAGGACCTTCAGAACTCAACTAATTTGGAAAGTTGATATTCTGAAGGTAAAATAGCAACTTAGTTATTAAAGGAAATTATCTGTACAGAAGGAGAAA-AAGCTTTAAGTCTTTTCCTTCAGAATCTCAAGTGGTTAATGCATGATGCTGCATGAATC-AGAAGGATTCATTTGATTCCCAAGCTGACCTCTTCCAGAAAATTTAATTTCTCCATCTCAAACATATTATTTTTCTCTGATGCAAAAAAGCAC----CTATCTGAATCTTATTCTGCCCCTTTTAAAATTAGTCACCCTTTTGTTACATTAATCTT---------TTAAAGTAAATGGAAGGATTAGTGTTTG-AACACAATACAAAGCCAAGTCTGAATACAAAATAATTGTGGACGCTGACGGTGTTTTAGTATTTATTATACTGGGCTACAGATAAGTTTTTTTACTTCATTTAGTCTCTGATTTTGGTTTGGATCCCACAGGTCAAGAATTAAAACAAGTATTCTGTTTATAGACTTAGTAGAGATCGAGGTTATATA---GTAATTACATCTCAGAATAGCAGATAAG ..........:x...:..x...-....::x....:x.xx.:.::.:...:xx.x..xx...:.x.:x...........:x.xx..........:.....:....x........::...x...x:.x.x.:.........-x...........x.x:..:...:.-..:::....:..::..::x..x:.................:.....:x...........-.:..:.....x..x....:..........:..x..::.....:.x.....x:..--:.........----.x..:.xx:..:..:.:..xx..----xx.:.::..x:x.x..:...x.:.....x.x.....x.--x.x..:..:.x..:..xx.---------.x......x..:...::..x.xx.....-..x.::.::.....-.....:x.........:xx...:..:.:x:..xxxx....:..:.x.x:x:....x::x:.x..x.....---:.....x..x.....:.x-....:...xx....:..x.----....x...x..:.-----------.x....x..x:...:.::.:..:---....x..:---.......::.:.....x..x.x.:.x.. 22M1I116M1I24M1D59M1D54M2I10M4I23M4D38M2I19M9D28M1D14M1I70M3I18M1I19M4I13M11I23M3I8M3D28M 406/586 69.3% 619/94230402 0.0% 52/586 8.9% 104518264 85696291 +3046 chr4 + 190214555 132055935 132055934 132055994 60 TGGCATGTTGAGTGATTCTTTTGTTTTCCATTTGTTTTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 42400908 42400907 42400967 42400908 42400907 42400967 60 TGAGATGCAAAGTCATTCTTTCTCATTCAAGTTTTTTTTTGTTTGTTTGTTTGTTTTTTT ..:x...:x:...x.......:x:x...x.x..x......................x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 89655027 NA +12843 chr4 + 190214555 132064884 132064883 132065243 360 TTTGAAATCCATGAGGGCTTAAATTCAAACCCTGGCTATGAAATTGCTTCAATATTAAGACAAGCTCCAGGGATGGGTTTTAAATTTCAATCTTTTAAGAAATTTTATGC--------GTCTTCGATGAGCAATTTCTCATGTTCATTCCAATGAACAATAATGTCAGGGTGATC-AAAAACAAGAATTTCAATTCCAAACATATCCCTAGAGGTGGCATCAATATAAAAGCAA-TTTTTATCTGGACATGTTTTGAATTTTCACTACTTCGAGGGATTTTTGGTATTGCTTTATTGATGGTGAAGAGCACAGCAATAGTTATTTTGATAGTAAGGCAGATTAATGTATTATGCCACATTGTATTTATAT chr4 + 94230402 27529046 27529045 27529403 27529046 27529045 27529403 358 TTTAGAATCTACAAGGATTTAAGTTCTAGC--TGGCTATAAAATTACCTCAATTTTAAGTCAAGCTCCTGGGATAGGTTTAAAATGCTAACCTGTTGCAGTTCTTTTTTTTCCTCACAGCTTTTGATGAACAATTTCTCATGCTCATTTCAATGAGAAACAATGTCAAAGTGTTCAAAAAACAAGCATTTCAACTCTAAACATATCCCTGAAGATATCACTGATATTTGAGCAATTTTTTATCCAGTTAGGAATTGAACTGTAATTCTTT---GTGGTTTTTAA------ATCAAAAATTGTATACAA-ATAGTAACAGCTATTATGGCATCTTGGCAGATTAATATAGTATGTCACATCATATTTGTGT ...::....:.::...::....:...x.:.--.......:.....:.:.....x.....x........x.....:.....x....x::..:..x..:x::xx:...x.x:--------.::..:.....:............:.....:......:x..:.......::...x..-.........x.......:..:............::..:.:x..:::....xx:.....-........::.x:.x.xx.....:.x.x.:.x:..---.x.:.....::------x.:.xx:..x..:x.x.:-.:..:..:..:....x..::.x:xx...........:..x....:.....::.....:.:. 30M2D78M8I57M1I58M1I35M3D11M6D18M1D61M 244/348 70.1% 358/94230402 0.0% 22/348 6.3% 104535838 85678717 +3709 chr4 + 190214555 132081177 132081176 132081223 47 TCTTTCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACATAG chr4 + 94230402 75248047 75248046 75248093 75248047 75248046 75248093 47 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagag ..:......................x................x.x.. 47M 43/47 91.5% 47/94230402 0.0% 0/47 0.0% 56833130 NA +3513 chr4 + 190214555 132081181 132081180 132081223 43 TCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACATAG chr4 + 94230402 75248047 75248046 75248089 75248047 75248046 75248089 43 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACag ....::.................x................:.. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 56833134 NA +3102 chr4 + 190214555 132081183 132081182 132081218 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 119479879 70734676 +3515 chr4 + 190214555 132081185 132081184 132081223 39 CTCTCTCTCTCTCTCTCTCACACACACACACACACATAG chr4 + 94230402 75248053 75248052 75248091 75248053 75248052 75248091 39 CTCTCTCTCTCTCTCTCTCACACACACACACACACagag ....................................x.. 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% 56833132 NA +3384 chr4 + 190214555 132081185 132081184 132081223 39 CTCTCTCTCTCTCTCTCTCACACACACACACACACATAG chr4 + 94230402 12601304 12601303 12601342 12601304 12601303 12601342 39 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG .........................:..........x.. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 119479881 70734674 +3062 chr4 + 190214555 132098963 132098962 132099029 67 ATACATATATATATATGTATATATACACACACATATATATATATACACATATATGTGTGTATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ......:.:..:..:.....:x::...:::x...:...:.x....:.........xxx:......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 86035664 NA +3114 chr4 + 190214555 132098971 132098970 132099041 71 ATATATATGTATATATACACACACATATATATATATACACATATATGTGTGTATATATATATA-TATTTTGT chr4 + 94230402 63788529 63788528 63788600 63788529 63788528 63788600 72 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATAAAGTGCTTTGT .......:x..x.xx..xx..:.........:...x...x.....:x.....:........x.-.::..... 63M1I8M 54/71 76.1% 72/94230402 0.0% 1/71 1.4% 68310442 NA +3185 chr4 + 190214555 132098974 132098973 132099028 55 TATATGTATATATACACACACATATATATATATACACATATATGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:....:...:.......::::.:...:.:...x.x...:..:............ 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 76404520 NA +3142 chr4 + 190214555 132109338 132109337 132109418 81 ATTGAAATAATAGAAAAAAATGTTAAAACAAATACAGTGTAGATTTGTTTTGTTTTGGTTTCTTTTTTTTTTTTTTTTTGC chr4 + 94230402 44908989 44908988 44909066 44908989 44908988 44909066 78 ATTGGAATGTTATGAAA---TTTTTAAATAAATACAGGACTAAATATACTTGTTTGGATTTCTTTTTTTTTTTTTTTTTAC ....:...:x..x:...---.x..x...:........x::x:.x.xxx:......x.:.....................:. 17M3D61M 57/78 73.1% 78/94230402 0.0% 3/78 3.8% 87200349 NA +7528 chr4 + 190214555 132116306 132116305 132116579 274 GATATATGTTATACATTCTTTAAAAGTTGTATACAATAAATAATAAATGAAACATTTTATTAATAGCCATGGATAATTATTTCATATTCAGTGTAGTTATTAGTTTTAAAATAGCTATTGGATTAAAAACAAATGCTTTTATATTTAAAAG--AAGACAGAATAGCACCAATTTAAAATACAAAGATACTGTAGAGACAGCTGTTCCATACTTCATGTACCAGGTGCATAAACAATAAACCTTTCCAGTTATAATT-AAAATTGCAATAAATCCTTT chr4 + 94230402 27608439 27608438 27608699 27608439 27608438 27608699 261 GGTTTTTGTTTTTTGTTTTTAAACATCTATGTACAATTAATAATGACTGAAACATCCTAT--------------ACTAACTTGTAATACAGATAAGTTAGTCATCTGAGTACAAAAATTAAATGTGAAACAGATGCATTTAGATTTTAAAGTGATGCCAGGATGACACCAAT--ACAGTACAAGGACACTGTAGGGACAGCTGTTACATATGCTGGGTTGCAGCTGCAAATGTGATGTACCTTTCTGAAAGTAATTCAGAATTGCCATAAATCCTTT .:.x.x....x.x::..:..x..x.x:.:.:......x......:.x........::...--------------.x.x.:..xxx..x...xxx.....x.x:.:.x.:x.:.:xx...::..xx:.....:....x....x....x....--.x.x...:..::.......--.x.:.....:..:.......:..........x....:x:::x..xx...x....x.x:::..:x.......:::xx:.....-.:......x........... 60M14D77M2I19M2D82M1I20M 174/258 67.4% 261/94230402 0.0% 19/258 7.4% 104507867 85706688 +3189 chr4 + 190214555 132172155 132172154 132172213 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 56138949 NA +3029 chr4 + 190214555 132203932 132203931 132203978 47 TATGTGTTTTTAAACAGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 43275284 43275283 43275330 43275284 43275283 43275330 47 TATCTGTGTTTGAACAGATTCTTCTTTTTTTTTCTTTTTTTCTTTTT ...x...x...:.....:.::..:.........:.......:..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 88928648 NA +3456 chr4 + 190214555 132215609 132215608 132215694 86 ATGCATGGTGGCATGTGCCTGTAGTTCCAGACACTCAGGAAGTTGAGGTAGGAGGATCACTTGAGCCCAGGAGTTTGAGACTGTAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..::....--..::.x...........x:...::::.:.:....x:xx.x.:.x.......:.....:..:..x:.:...... 11M2D73M 57/84 67.9% 84/94230402 0.0% 2/84 2.4% 56182415 NA +3143 chr4 + 190214555 132216735 132216734 132216827 93 GTATATATAGATATTCTCTAAATCATAGACCTATATACAGTCATGTGTTTTCTTTGTTTTTTTTTTGTTTGTTTGTTTGTTTTCTTTTTGAGA chr4 + 94230402 64656497 64656496 64656589 64656497 64656496 64656589 93 GTTTACAGAGACATCTTCACAATTTAAAAGTCACAGAACATCATAAGCATGCTTGGCCTTTTTTTTGTTCGTTTGTTTGTTTTTTGTTAAAGA ..x..:.x...:..::..xx...:xx.:.x::.:.x.xx:....:x.:x.x...x.::...........:.............:.x..x:... 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 67560238 NA +3066 chr4 + 190214555 132216758 132216757 132216832 75 CATAGACCTATATACAGTCATGTGTTTTCTTTGTTTTTTTTTTGTTTGTTTGTTTGTTTTCTTTTTGAGACGGAG chr4 + 94230402 29671922 29671921 29671992 29671922 29671921 29671992 71 CAGAGAGATATTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGT----TTTTTGGGGGGGAG ..x...xx...x..:xx.:..::::..x:....x.......................----......:.:x.... 57M4D14M 53/71 74.6% 71/94230402 0.0% 4/71 5.6% 102544836 87669719 +3356 chr4 + 190214555 132216759 132216758 132216830 72 ATAGACCTATATACAGTCATGTGTTTTCTTTGTTTTTTTTTTGTTTGTTTGTTTGTTTTCTTTTTGAGACGG chr4 + 94230402 89314566 89314565 89314634 89314566 89314565 89314634 69 ATGGACATAAATGAAGAC---TGTGTTGTTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGG ..:...x..x..:x..x.---...x..x..x.x..........................x......x..x.. 18M3D51M 56/69 81.2% 69/94230402 0.0% 3/69 4.3% 42902193 NA +3821 chr4 + 190214555 132225504 132225503 132225571 68 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTTGAACCTTGGAG chr4 + 94230402 76033204 76033203 76033271 76033204 76033203 76033271 68 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG ....:.x......:...........::........x.xx.x...x..........:x...x...x.:. 68M 53/68 77.9% 68/94230402 0.0% 0/68 0.0% 56192300 NA +3199 chr4 + 190214555 132263424 132263423 132263491 68 AGTTTCTTTTCTGT---GTGTGTGTGTGTGTGTGTGTGTTGTTGTTGTTGTTTTGTGTTTGTTTTTGCTTA chr4 + 94230402 18964415 18964414 18964485 18964415 18964414 18964485 71 AGTTTTTTGCTTGTTTTGTGTTTATGTGTGTTTATGTGTTGTTATTGTTGTGGTGGATTTTTTTTTTTTTA .....:..x::...---....x.:.......x.:.........:.......xx..x:...x.....x:... 14M3I54M 52/68 76.5% 71/94230402 0.0% 3/68 4.4% 113299009 76915546 +3183 chr4 + 190214555 132277213 132277212 132277262 50 TTTTTCTTCCTTTCTTTCTTCTCCCCTCCCCTCCCCTCCCCTTCCCTCCT chr4 + 94230402 17044275 17044274 17044324 17044275 17044274 17044324 50 TTTCTTTTTCTTTTCTTCTTCCCCCCTCCCCCCCCCCCCCCATCTTTCTT ...:.:..:....::......:.........:....:....x..::..:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 115232938 74981617 +3099 chr4 + 190214555 132277215 132277214 132277257 43 TTTCTTCCTTTCTTTCTTCTCCCCTCCCCTCCCCTCCCCTTCC chr4 + 94230402 49829864 49829863 49829906 49829864 49829863 49829906 43 TTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCC ......:....:........::...:.:......:.....:.. 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 82447351 NA +6640 chr4 + 190214555 132293490 132293489 132294026 537 ACTGGCCTCTTC-------TAATAGCACACGTTTTTCTGATGAATGATAAACTTTTTATTTTTCTTCTTGTTATAAGATTCTTTCTCCTTTTCTTTCTTCTTTCTGTAAC-TGAATGGTG-AGCCAAAGGACATATTCATCTTGAATGCTAAGATTTTC--TGCACCCTCAGGAAGTGTAAAGTATGAATGTGATGCAAACTCTGCAGCAAG------TTCACCCACTGGCAAATACACATTAACTTCTTACTGTTATTTTCAATAAGTGAAATTCACAGTTATGGGTACAAAACAAATACAATTTATGCAAGCTTGACCAATCTTATTAAAATTGAAGTCTTATACTTTTTGGTATACTTAATTTTGGAAA------------------AGACCTTTTTAAAATACTAAAA------CAGCTTTCCACAAACTGTATGTA-------TTTTTTTTTTCCCGTG---GCAAGGAACTACAGAATTTTAGTCAAT----TGATCTGAAAGTT---CTTATTGGAGATATATTTTTGCCATGGTCAAACTTGA---AGTGTT----GAAAAATTTTATGGCTTAATTAAACTAACCTGCTTGAG chr4 + 94230402 27685574 27685573 27686146 27685574 27685573 27686146 573 ACTAACCTCTTCCTCCAAATAAAAGAAC-TACTCTTCTAGTGAATAATTATATTCTGACATTT--TGAAGCTCTAAGGAGCTCTACATGCAATTTTCCTACTTCTGGAAAATGAAAACTACAATCAGAGCACTTAAGCAACTTGAGTGCCGTCATCTTCCTTGGAC----ATAAAGTCTAAAACATA---------------CTGCAGCAAGAGCCTGCTAATCTGCATGCAAGTTCACATTAACTTCTTACTGTTAGTTTCAATAAGTGAAAGTCACGG-CACAGGCTCCATAAAAATCAGATTTATGCAAGTTTAATAAGCCTCATTGCAAGTTATTTCTCAGAGTTTCATGCTCTGGTAATCTTGGAAAGCTAGTAGAAAAGAAAACAAAAATCTTCCAAAGCCCAGAATTCTTCCAGCAGCACAGAAAACAAAGGCAAAACAGTAGTTTCTTCTCCTGTGCTAGAGAGAAAAGACAACTTTCTGCTCAGTGAGATGCTGTGAAAACTGACATGGTGGGAAACACTTCTTTGTCATATAAAAACTTGATGCTGTATTAAGAGAGAAACTT------TTAATTAAACTCGACTTCCTGAG ...::.......-------...x..x..-:::.:....::.....:..x.xx..:.x.:x...--.xxx.:.x....:xx..:.x:x:x:xx:....:.x:.....x..x-....x:x.:-.::..:..x..x..xx..x.....:...::xx..:...--..x..----.x:....x....::..:---------------..........------:.x.:.::.xx....:.x.....................x...............x....:.-:.::..:x.x.x.x....xx:...........:..:.:x.::..:...:x..x.x.xx...:.x.x...:xx.:x:xxx....:.......------------------.:.xx.:..:x...xx.:.:..------....xx:x..x...x::x.x.:.-------xx...:..:...:...---.x:..:..xx...:xx..:.:x...:.----..x.x.....::.---x.x:.x...:.:.:x.:....:...:xxx........---x..:..----..:...:..------...........x:x..x.:.... 12M7I9M1D34M2D45M1I9M1I38M2I5M4D17M15D10M6I62M1D91M18I22M6I23M7I16M3I27M4I13M3I37M3I6M4I9M6D23M 328/508 64.6% 573/94230402 0.0% 94/508 18.5% 104607916 85606639 +3043 chr4 + 190214555 132293536 132293535 132293587 52 TTTTATTTTTCTTCTTGTTATAAGATTCTTTCTCCTTTTCTTTCTTCTTTCT chr4 + 94230402 64726515 64726514 64726566 64726515 64726514 64726566 52 TTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCT ..::....:.....:.x..:....:..:...:.:.:.....:x......... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 67567021 NA +23373 chr4 + 190214555 132299551 132299550 132300198 648 AAATTAATTTAATCCCATACAGTAGGCTTAGTCA---ATCTTGAGCATATTGCTGTCATTTTTCATGGTGTATAATTTACAGATACAC------TTACATAAAAATGATCAAA-TACTTGTTAAATGTATGTTATGCAATGTTCATTTAAAGTATTACGCTTATACTGTACTCATTTTTATTTTTGAACAAAATTTTGTTTCACAGTACATTAATTTCTATTATGTATTTTTGTACTTTCTCATTAACACACTTTCACTATTTCAATAAACAAAACTAAACATGGTATTAGCTCTTTGTCTGTATGCTTCAGTAATTTCAC-------CAAACAGCTGGAAGG----CATATGCATGACTGTCGTAGACTATTGTTTTAATCATGTTTATTGCTTACAGTGTGTTTAAA---------------------------TTCTTATTACTTTGAACAACA--GTGTTTATGTCTATAAATTGATTAATGGATTATAATC-TTAACATGAAATGGTGAAATCTACAGCTGGCTAAGTAGTGTGTTT-TCTTCCAAATTACTTAAATTACAAATGTCAAGCACATTGCATTCACCATTTAACAGGAGAAGTAGCTTGCCAAGAAGTCCTTTTATTATTAGCTATTCTCAACATTGGTACAGCTGTTGGAAATCTAGCTATCCATTTCAAACAAGTCATATTATGA chr4 + 94230402 27689086 27689085 27689760 27689086 27689085 27689760 675 AAAGTAATTTCATTTCAT--------CTTACTCATATGCTTATAATATATTCCTATAGTTTTTCAAAGCTTGTATATAACAACCATGTATTATTTTCTATCAAAATAATGAAAGTAGTTTCCAAAT----------------CCATTTGAGGTTTTA-ACTTTTACTGTACTCTTCTTGATTTCCAAACATAATTTTCTTTCACAGTACATTAATTTCTATTACACATTTTTGTACTTTATCATTAACACCATTTCATTATTTCAATAAATGAAAGTAAATGTAGTGTTGGCTGTTTGGCTCCACGCTTCAGTAATCTCACCATGCTTCAGACAGCTGTAGGACAATCAAATAAATGAGTGTAACATGACATTGttttaattatatttattaattCAAGGATGTTTAAATCATTGTGTTGTGTTTGtttttttttttttttttttaattGAACAATAACGTATTTAAGCCTATAAATTGATTAATGGATTGCCATCTTTATCAAGCAATAAGCAAATCTACAGCTGACTAAGTAATGTGTTTGTTTTACAAATTAGCTAAATTTTACATGACAAACACGTCACATTCCCCATTTAACAAAAGAAGCCACTTGCCAGGAAATCTTTTTATCATTAGTTCTTCTCAAGTGTGATACAACTGCTAATGAAAGAGCAGGACACTTAAAAGAGGCAACACTGTAA ...x......x..::...--------....x...---:::.xx.::.....x..:.x:.......x:.:x.:..xx.x...:x:.:::------..x:..x.....:..x...-..x..x::....----------------:.....:.:..x...-:...x..........x.:..x....:::....x......x.........................:::.............x..........xx.....:............::...x....::.:..:..:...x....x..x:.:...........:....-------..:.......x.:.:----..x..:x....x...x::.x:x:...........:..:......:x..xx..x:........---------------------------..:..x..xxx........:.--..:....x.:.....................::x...-...x..x.x...::xx.............:.......:.......-.:..x.......x:......x:.x...x...:...:.::.....x..........::.....:x:.......:...:..:......:.....:.x.......xxx..:....:...:.::x:.xxx...x:xx..:..x...x.:.:x.:.:.:.:. 18M8D8M3I51M6I19M1I12M16D15M1D163M7I15M4I62M27I21M2I37M1I45M1I157M 454/623 72.9% 675/94230402 0.0% 77/623 12.4% 104610465 85604090 +3028 chr4 + 190214555 132309530 132309529 132309594 65 TGTATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATAAAT chr4 + 94230402 28997783 28997782 28997847 28997783 28997782 28997847 65 TGTAGTCACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATATAAAT ....xx:.:...:...:x.x....:.:...:..:...xx:.xx....:................. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 103311747 86902808 +3150 chr4 + 190214555 132309568 132309567 132309673 106 TATATATATATATGTATATATATAAAT------ATACGTATATATTTATATATATACATATAAATATATATATAT--ATTTATATATACACACATATACATATAACTTAAAAGA chr4 + 94230402 81427530 81427529 81427640 81427530 81427529 81427640 111 TATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATAATGAC---TTTATGTGGCTTACAAGA .......:...x..:..:.::.x.:x.------...........:...x......x...::.x....x...:...--..xx:......xxx..---.x:..:.::....x.... 27M6I42M2I16M3D18M 74/103 71.8% 111/94230402 0.0% 11/103 10.7% 50882038 NA +3216 chr4 + 190214555 132323191 132323190 132323264 74 GTGCATCTGTGATCCCAGCTACTTGGATGTCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:x...::.:...........:.x.x.....x.xx.x...x.:........::.:..x:xx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 56289987 NA +3009 chr4 + 190214555 132340500 132340499 132340561 62 TCTCTCTTTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACAAACACACATACATA chr4 + 94230402 60831530 60831529 60831591 60831530 60831529 60831591 62 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATA ...x...:.x.............x.x.x.....:.:....:.:....:x....x:x..x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 71508970 NA +3345 chr4 + 190214555 132340502 132340501 132340576 75 TCTCTTTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACAAACACACATACATAT---TTCACTTAATCTGT chr4 + 94230402 60831530 60831529 60831607 60831530 60831529 60831607 78 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGT ...x.:...x.............x.x.......:.:....:.....x:.....x.x:.x..---..:.:x.::..... 61M3I14M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% 71508972 NA +3519 chr4 + 190214555 132340504 132340503 132340555 52 TCTTTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACAAACACACA chr4 + 94230402 60831530 60831529 60831581 60831530 60831529 60831581 52 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA ...x.....x.............x.:.......:.:........x..:.... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 71508974 NA +3346 chr4 + 190214555 132340506 132340505 132340580 75 TTTCTCTCTCTCTCTCTCTCTCTATATATATATATATACACAAACACACATACATATTTCACTTAATCTGTTTAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTT------CTAAATACATTTAT .:.x.....x.............:.:.......:.:..:...x....:..:..x.------..x...x::..... 55M6D14M 53/69 76.8% 69/94230402 0.0% 6/69 8.7% 71508976 NA +3033 chr4 + 190214555 132340508 132340507 132340559 52 TCTCTCTCTCTCTCTCTCTCTATATATATATATATACACAAACACACATACA chr4 + 94230402 60831530 60831529 60831581 60831530 60831529 60831581 52 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA ...x.....x...........x.:.:.......:.::.:.x......::... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 71508978 NA +9037 chr4 + 190214555 132347999 132347998 132348246 248 TGACCTGAAC-ATATAATTGTAGAACATGTTTTTCATCTATTGAGCATTAGAGTAAAATCTAGTTAACTC--TATAAGAAGACCATGTGTATTTGCTTTTGAATTACTCTCTGATCAACTTGGTATTTTTTGATGCTAATACGACTGCACCAACATTTACCCTATCCGGCCTTAAACAAAACAG-AAGACCCATGAGGATGAAACCCAAA--TTTTGCAAATGTTAAAGGAATAAAGCATCTGCAAAATATTTT chr4 + 94230402 27711763 27711762 27712014 27711763 27711762 27712014 252 TGGCCTTAGCTATATGACAGTGGATT-TGGCTTTCATTTAATATACACTGAAACAGAATATGGCTAATTACGTGTTCTGGAGCCTTGAGTATTTGTTCTTAGATTACTTTGCGATCAGCTTGGTATTTTT-GATGCAAATGAGTTTGCTCCAACATTTACCCTTTCCAGCTTTAAACAAAACAACAGGACTCATGAGCACAGAGGCAAAAACTTTTGCAAATGTTAAAGGGATAATGATTCTGGCAGATACTTT ..:...x.:.-....:.:x..:..x:-..x:......:..x.:x:..:.::.::.:...x.:.:...:.x--.:.xxx::::..x..x.......:.:..::......:.x:.....:............-.....x...:x.x:...x..............x...:..:............:-.:...:......x.:::.:x.x...--..................:....x.xx....xx.:...:... 10M1I15M1D43M2I58M1D53M1I25M2I42M 174/246 70.7% 252/94230402 0.0% 8/246 3.3% 104636236 85578319 +3097 chr4 + 190214555 132370735 132370734 132370789 55 TAATTTGTGTGTGTGTGTGTGTGTATATATATATGGTATATATATACACATATAT chr4 + 94230402 72321899 72321898 72321953 72321899 72321898 72321953 55 TAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACATTTTAATATATAT ....x...............:.::........x..:.x..:..x.xx.:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 60048836 NA +3562 chr4 + 190214555 132370891 132370890 132370985 95 TGTGTATATATACATATATAGATATGTGTATATATATGCAT----ACCATATATATGGTATGCATGTTTATATACGTATATACATATATATGGTATGTG chr4 + 94230402 82804419 82804418 82804517 82804419 82804418 82804517 99 TATTTAAATATATTTGTAGGGATATGTGTGTCTACATGCATGTATACAATATATGCAATATGTGTAAATACGTCCGTATTTACATATAAAATGTGTGTG .:.x..x.....:x.:..x:.........:.x..:......----..x......::::....::.:xx..::.x.....x........x.xx..:.... 41M4I54M 66/95 69.5% 99/94230402 0.0% 4/95 4.2% 49566472 NA +3176 chr4 + 190214555 132387086 132387085 132387179 94 AAAAACAAAACAAACAAACAAAAAAAACCAAAAAAACTCTCGAACTATTACACTAGGTAATATATATACACACAAATATATATTTTTTCTTTTT chr4 + 94230402 80728979 80728978 80729072 80728979 80728978 80729072 94 AAAAAACAAACAAACAAAACAACAACAACAAAAAAACCCCCACAATATTTCAGTAATGCATATTTATATATGCAATGATAGATCTGGATTTTTT .....xx...........xx..x..x.x.........:.:.:x.x....x..x..:xxx....x....:.::...xx...x..:.xxx:..... 94M 64/94 68.1% 94/94230402 0.0% 0/94 0.0% 51658107 NA +3896 chr4 + 190214555 132408864 132408863 132408935 72 TTTTTGTTTGTTTGTTTGTTTAGTTGGTTGGTTTGTTTTTGTTTT--------------TTGTGTGTTTTTTTTTTACAGCACTTT chr4 + 94230402 31166936 31166935 31167021 31166936 31166935 31167021 86 TTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTTTGCCTTGTAGAAAAAACATGCTGTGTGTACTTATTTTACAGCCCTCT .....x............x..:............x......::..--------------:.......x:..x.........x..:. 45M14I27M 60/72 83.3% 86/94230402 0.0% 14/72 19.4% 101241928 88972627 +3043 chr4 + 190214555 132408865 132408864 132408907 43 TTTTGTTTGTTTGTTTGTTTAGTTGGTTGGTTTGTTTTTGTTT chr4 + 94230402 31166933 31166932 31166975 31166933 31166932 31166975 43 TTTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTTT ....x...x...........:...........x......x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 101241932 88972623 +7630 chr4 + 190214555 132444938 132444937 132445219 282 TTGAGGGTTTTTTTTTTCTTTTAAAGCTAAGT--GGGTTTTAG---TATCGTAAGGGAATTAAATAGCT-TTTGAGAGTGATTTTTATATCAACATGCTCCAAAGCTTTTGTAGGTTTCAGGCAACCATTTTAAAGATATTT-TGTTCAAATAATGGATTTGTTTTATTCTCAGATAAGTCACCCAGTAATCCCTTGCTTTGCAGCTTATAGCGGCTGTA-GCCAAGGTTAATTAATTAGAAATATTAAAGCTTGGATTAACACTTGGACCTGATTCACAAATAATTTGC chr4 + 94230402 27736505 27736504 27736791 27736505 27736504 27736791 287 TTGAAGTATTTATTTCCCTT---AAGCATGGTCTGTGTTTTAAATCTTTATTTAAAGAATAATATGATTCTTTAAGAATGATTTCCATTTAGAAAAAAATTAATGCAGTCGTAACTCCTAGAGACTGGTTTTAAAGATAATTATAATGGAGAAACAGATTTATTTTTTATGCAGATGAACTCTGCAGCAATGTCATCCTTTGCAGTTTACAATTGTTGAAAGCTAAGATCAATTAATTAGAAATATTAAAGTTAGGATTAACTCTTGGACTTGATCCACAAATCACTGGC ....:.xx...x...::...---....xx:..--.x......:---.x.xx.x.::....x.x..:::.-...:...:......::..x.x:.x.x:xx::..x..xx.:...:x.:::..:x.x:x:...........x..-.:x.x:.:x..::.....:....x.x:x.....:.:::x:x...:...x:.x.x........:...:.::x.:..x.-..:...:.:.....................:.x........x.......:....:.......x.:.x.. 20M3D9M2I9M3I23M1I72M1I77M1I69M 184/279 65.9% 287/94230402 0.0% 11/279 3.9% 104708433 85506122 +13881 chr4 + 190214555 132474733 132474732 132474991 259 CTAATAACAGCAATTGAAGGCATTTATGTTTTA-AAGCAGTAGCTGTAATTATATTACTTTTCCTATAAATAACATTGGCATTGATGCTTTTATAATGAAAATGAACCCAAGCGATTGAATATTTATGAATCAGAATCTTT-TTGGAAGTGAATATGACAGCATTG-AAACATGCAATTACCAGAAATACCTACAGTGATTAAAATGTTAATTAATGACAGTTTCTTTTATTAGCTTAAACAAAATCATACTACACATAGAA chr4 + 94230402 27743830 27743829 27744091 27743830 27743829 27744091 262 CTACCAATAAATATTTCTGGCATTTACGTTTTATGAGTAGCATCTGTAATTATATTACTCTTACTGTAAATAACATAAGCAACGATGCTTTTATGATGGAAATGAATTCAGAAGTCTGAATATTTATGAATTAGTATCTTTACTCTAAGAGAATATGACAGCATTGAAAACATGCAATTACCAGAAATACCTATAGTGATTAAAATTGTAATTAATGACAGCCACTCTAATTAGCATAAAGCAAAGCaaattaaagataaaa ...x:..:.:xx...xxx........:......-:..:..:.x................:..x..:..........x:...x:...........:...:.......::..::x.x:...............:..x......-:.xx...x................-..........................:............xx.............::x..:.x......x....xx...x..x.:..x.x...:.. 33M1I107M1I24M1I95M 206/259 79.5% 262/94230402 0.0% 3/259 1.2% 104730903 85483652 +6397 chr4 + 190214555 132480677 132480676 132480904 228 ACTGGATTCAGGGTTTATATCAATCTAAGAGTATTGTTTTTGTTTTGTTTTGTTTTAAGAG----TATACTTCATCAGCTGCTGTGAAATAGGCATTATATTTCATTCTCCCTAACTTTACATTTTCCTTAACTTTTCAATGTGATTAATAGAGACTTTTTATGTGTTAATTTTACAGAATGAATTTATATTCA----------TTTGTTAAGAAAGTGAAATCGTATCAAGGGAACTGAAA chr4 + 94230402 27746112 27746111 27746329 27746112 27746111 27746329 218 ACTGAAGTCTGGACTTTTGTTTATATAAAAAT-------TTAATTTGCTTCTTCTTGAAAGACATTTTTCTTAATAAACTGGGATAAAATGAATGTTATATTTCATTTTTGCTAGCTTT-----------------TCAATATGATTGATGCAGACCTTTAATGCGTTAATTTTACAACATGAATTCATATTCAAATAGATAGTCTTGTTAAGAAAGATGAACAGCAAAAAAAAAAATGCAA ....:.x..x..::..x.:.:x..x...:.:.-------..:x....:..:x.:..:.:..----.x.x...x..x.:...xx:.:....:::::............:.:x...:....-----------------.....:.....:..:x....:...x...:............:x.......:.......----------:............xx:..:x.:.xx..:::..x..x.. 32M7D22M4I54M17D58M10I38M 142/204 69.6% 218/94230402 0.0% 38/204 18.6% 104734565 85479990 +9464 chr4 + 190214555 132491569 132491568 132491789 221 CTTAATAAAGCTAATAAAAAGTGGCTATTTTTTACCACTCAAATATGGA--AAACTTTGTGCCAGAGA---GATATCCCAAAGGAGTGATTATCATATGATAACCATATGTTC-TCCTCTGTCTTACTGTTAATTAAATTAATTTATTATGTA-GTCTTTCCCTAAGTAGACTTGATTTAATGTGCTGCATGTAATTAGTAGCTC-AAGAAATGGAGATGAGATTATTT chr4 + 94230402 27750537 27750536 27750765 27750537 27750536 27750765 229 CTTATTAGAGCCACATAAAAGTGGTAAACCACAGCCATAAAAAGATGAAGCAAAGCTTGTCTCTGCAATCCACTGTCCCAAAGGTATGATTATCTCCTGATAACCATATCTCCCTCTTCTGCCTTATTGCTAATTAAATTAATTAATTAAGGAAGTCTTTCCCCAAGTGGACTTGATTTAATATGCTGAATGTAATTAGCTGCTCTTGGAAATGGAGATGAGATGATTT ....x..:...:.xxx........:x.x::x:x:...:xx...x...:.--...x:....x:.x.x:.---:x.:.........x:........x:x............x.:.-..:....:....:..:..............x....x.x.-.........:....:.............:.....x..........:x....-x:................x.... 49M2I17M3I42M1I39M1I51M1I23M 168/221 76.0% 229/94230402 0.0% 8/221 3.6% 104741032 85473523 +3073 chr4 + 190214555 132499733 132499732 132499790 58 TGTGTGTGTGTATGTGTGTGTGTGTATATATATACATATATATATATACATGTTTATT chr4 + 94230402 79265522 79265521 79265579 79265522 79265521 79265579 58 TGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATT ..........:.........xx........:.....::.:.::.:.::..x::x.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 53234211 NA +4121 chr4 + 190214555 132499867 132499866 132499982 116 TGTATGTGTGTGTGTGTATATATATGTACACATATATACACATATACATACATATACACATATACACATACATATATACACATATACATACATATATACACACACA----TACATTTTCT chr4 + 94230402 21109202 21109201 21109317 21109202 21109201 21109317 116 TGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGT----GTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCT ...:.x.x....x.:....x.........x..:......x.:.----:...x.....::..:...x...:.x.x.:.::.:..:.::..:x....::.::.....:----....x..... 43M4D59M4I10M 78/112 69.6% 116/94230402 0.0% 8/112 7.1% 111390665 78823890 +3230 chr4 + 190214555 132499872 132499871 132499942 71 GTGTGTGTGTGTATATATATGTACACATATATACACATATACATACATATACACATATACACATACATATA chr4 + 94230402 54963190 54963189 54963260 54963190 54963189 54963260 71 GTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA ..x...:.:.x:...:.x...:....x..........:.:...xx..::.:.:.x:.......:.:x.... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 77536682 NA +3095 chr4 + 190214555 132499875 132499874 132499928 54 TGTGTGTGTATATATATGTACACATATATACACATATACATACATATACACATA chr4 + 94230402 70600711 70600710 70600764 70600711 70600710 70600764 54 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACA ......:...x:.x:........x....:.:.......:.x....::.....:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 61899164 NA +3012 chr4 + 190214555 132512108 132512107 132512160 53 GAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAACCAGAAAGCACA chr4 + 94230402 88382714 88382713 88382766 88382714 88382713 88382766 53 GAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACA .........xx.x.........::.:...........:..:.xx::....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 44129394 NA +3053 chr4 + 190214555 132512121 132512120 132512210 90 TCTCAAAAAAAAAAAAAAAAAAAAGAAACCAGAAAGCACAGCTAGCTGTTAGTTTATGGCAATGGTGCAGGCTCAAGTGAGTCAGGTGAG chr4 + 94230402 71403931 71403930 71404020 71403931 71403930 71404020 90 TTCCAAGAAAAAGAAAAAAAAAAAGAAGAAATAATGAAAAGCTTTTTACTTGCTTACAATACTCAGGCAAGCTCAAGGGAGACGTGTCAG .::...:.....:..............:xx.x..x.x.x....xx:.::.x.:...::::.x.x:x...:.......x...x.:x..x.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 61108190 NA +3033 chr4 + 190214555 132514661 132514660 132514713 53 CTTTCTCAAAAAAAACCAAACCAAAACAAACAAAAAACAGCAACAAACATAAA chr4 + 94230402 23069443 23069442 23069495 23069443 23069442 23069495 53 CTTTCTTGAGAAAGGGGAAAACAAAACAAACAAACAACAGCAACAAAAAAAAA ......::.:...::xx...x.............x............x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 109445218 80769337 +16578 chr4 + 190214555 132524161 132524160 132524803 643 TTTTTACTGATTTTTTTCTCCCAACATTTGTACACTTCTCTCTACTTTTATAACACTCTTTGGATAACAAGAAAAATTAATTTGCAAACATTTAACAGCTGTTTTGGATATTTTCAAGCTTTTGTAGCTTTCAGTTACACTTTAATGTGTTTTTGGATTACATTGTCTTGTTCTTAACATATGTAATTAATATCTGTATTAAAAGCATACTTGTTCAAATTTGGTATAAATAGGACATATTACTATTCAATTACATAGAGACAACTGCAACATTGGCTTACAAAATTACTGTTTTTTCTTTCATCTGAGAAACTGGCATAAATCCAGAGAGTGCCAAGGATAATAATAGCAGTGACTTTAATTAAATTTAACATATTGATACTGTGAAATTTAGTTATTAAATTTTGATTCATAGGCA-TTAAAGAAAAATATACAAAATTACACTAACATTTGATCTAGCTTTCTGTGATATTATTAAAAACA-------AGCGAAAA--AATCAGAATGAAGCCTCCCCAAAGAATTGAATTTCAGTATGGAATATGTGAAATCTCTTTAACAAGTTTTTAAATCTTTTTAAGCAGTGTCCAGATGGTCAATAACTTACCTGCAGTTACTATTACAGAAAATTAAAAT--AAGAATAATCCTT chr4 + 94230402 27771580 27771579 27772174 27771580 27771579 27772174 595 TCTTGCCTTGTTTTTTTTTTTTAACATTC---CACTTATTTC-------ATGAAACTCTTAGGAGAGGGTGCAGAAGTAATTTGTAGCAGTGTAACAGCTGGTTTAGATTTTGTCAGGCTTT---------CTGTTACATTTTAGTGTGTTTTTGGATTATGTTGTCTTGTGCTTAATGTGTGTAATCCATGTCTGTATTAAAAGGATACTTGACCGCATTTGGTGTAAATAG----CAGTGCCATCTAACTGCATGAAGACAACCCATGAATCAGCTTAC--AATTAGTGTGCTTCATTTTATCCAGGAGACTAATACTAATCC--ATAGTGCTAAGGATCATGATAGCAATGCCTTTAATTAAATATAACATCATGGTTATACCAAATGTAGTCCTTGAATTCCAA--CACAGTTAGTTTAATTGAAAGATGCATAATCCCACTAGTCTTGGAATTAG----------TATTGTTGTAAGCAATAATAGAGTGGAAATGCATTTAAAAAAAGCCT-------AAACTGGGACAAATTA-GGAGT---TGATATCTACATTGCAATGTCTTTAATCCTC----------TCCAGATGGTTACTGATACATTAGCATCAAGTACaaaaataaaataaaattaaaaaataattCTT .:..xx..x:.......:.:::......:---.....x.:..-------..:.x......x...x.:x:x.x.:..x.......:.:xx:.x.........x...:...x..x...:.....---------.x......:....:...............::.........x.....::.:......:x..:.............x.......x:.:x.......:.......----:.x.:.:..::..:.:...::.......:xxx:x..::......--.....x...x:..:x...:...:::..:...:::.:x.....--.x.....:......x..:......:..x............x......xx..:.xx.::x....x....:x..:....:::.--..:..x:.-..x..xx:...x..:..x...:x.....::x..x..x:...----------....:..:x..:..-------..:.:...--x..:x:..x:......-------:..:..::x:xx.x..-...:.---...x....x:x.x:...xx.:..x....:.:----------..........:.x.:.:x:.::x...x:x.x..:x.x.:x...x......--..:......:... 29M3D10M7D73M9D102M4D44M2D42M2D81M2D8M1I41M10D14M7I8M2I16M7D16M1D5M3D31M10D50M2I13M 403/583 69.1% 595/94230402 0.0% 72/583 12.3% 104752581 85461974 +15056 chr4 + 190214555 132531977 132531976 132532479 503 TCCATTATTAGCAAAGACACTTCTGATTAGGGTGACTGTAGTATCTGATTGTGCAGACTTTGATAAATAAATGCATGAAATATACCCTATA-CATAATGACATTTTACACCTCACTTTGGATGACATAAAATGTGC-ACAGAT-ATTTATTTTCA-GAGCATAATTACTGAGAGAAAAAATATTTTATGTAATTATGTTGCTAAACAATGCATGCCTTCATT------TAATAGATAACTTCCTTAAAAAAAAACACTGTGGGAGCCTGCCTTTTTGATGTAACAGATGTTGTGTTTACACAAAACAGAAATGAAAT-CAGGATTCTATACTTGGAGTACCCATCTATTTTTAAGAATAAGGATTTCCAGTAGCAGATGGCA-TCCACACTGTCTTCTGACATA------GAAAAAAAAA-------------------AGTTTTCCTTAACACTGTAAATTAACAGATTGGTTACAACTATACATATATGGATTAATACATTTAAAATATGT------TTTTATACGAA----AGTAGAAAAATTTCCA chr4 + 94230402 27777053 27777052 27777590 27777053 27777052 27777590 538 TCTATTTTAAGTACAGAAACCTCCCATT---TCAAGTGAACCTCTTTGTTCTGTAAGCTTTGATAAATGAGAACATTAGATACACCCAACAGCCTAATGAAATTCCACACCTTGGTTTGGATGCTATCAAATGTGCTGCAGATTATTTATTTCCCCGACTGTGATTACTTGGAGAAAAA-TCTCATCTTTGATAATGGTGCTAAACAATGCATAGCTTCATTGATATTTAATAGATAACATACTTAAAACAA--CACTTTTGGAGTATATCTTTTGTACTCAACAGCTGTTCAGTTTAAA-AAGACAGAAGTACAATACTGTATTGTATACTTGAATTACACATTTAGTTTAAGGGATAAGAA-TCCCAGTAGCAGATGGTATTCCAGGCTG---TCTAACATAGCAGGGGAAAGAAAAAAAGTATAACATAGGCCAATAGTCTGCCTTTATATTATAAATCAACAGACTGGTTACTGATGAACACATGAAGATTAATTCA-TCAAAATCTGTGGATTATTTCTGACAAATGATGGTAGAAAAGATTTCA ..:...x.x..:.x...x..:..:x...---x::.x..x.x:x::.x:..x..:.::...........:.:x:...x.:...:....x.:.-.x......x...::......::x........x:..x........-:.....-........:.x-..x::.:......x:........-.x.:x.x.x.:..x...x...............:x.......------...........x.x.......x..--....x.x....:x.::.....xx.:x:.....x....xx.....x.-..:......:.:x...-.x.x...x........:.x...x...:..x...x.:.:.....:.-.:..............:.-....x:...---...:.....------....:.....-------------------...:.x....x.:.:.:.....:......:.......x:x.:x...:..:x:.......x..-.:.....x...------...:xx..:..----:........:x..:.. 28M3D60M1I44M1I6M1I11M1I23M1D42M6I24M2D46M1D16M1I45M1D18M1I9M3D9M6I10M19I62M1D11M6I11M4I16M 360/491 73.3% 538/94230402 0.0% 59/491 12.0% 104754924 85459631 +3865 chr4 + 190214555 132559556 132559555 132559639 84 ACATGGTAGTGCGCACCTGTAGTCCCAGCTACTTGGTAGGCTGAGGCAGGAGGATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..:....--..x......:...........:x........x.xx.x.:.x.:...........:..x.xx:..:..:.. 12M2D70M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% 56526360 NA +3173 chr4 + 190214555 132592893 132592892 132592970 78 AAGAAGAAAGAAAGAGAAAGAGAAAGGGAAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAG chr4 + 94230402 73744718 73744717 73744785 73744718 73744717 73744785 68 AAGGAAAAAGAAAGGGAAAG----------GGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAG ...:.:........:.....----------.....:.:..:::.::.:::....::....x....x.....x..:... 20M10D48M 49/68 72.1% 68/94230402 0.0% 10/68 14.7% 58848175 NA +3054 chr4 + 190214555 132624556 132624555 132624638 83 CTCCTTCTCCTCCTCATCCTCCTTCTCCTCCTCCTTCTTCTTCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTGTTCCTACT chr4 + 94230402 44836693 44836692 44836775 44836693 44836692 44836775 83 CTCCTTCTTCCTCTTCTCCTCCTTCACGTCCGTCTTCTTGATCTCTGCCTTGAAAGCCTCCGCCTCCCCGTTCTGGTCGTCCT ........:.::..:x.........x.x...x:......xx....:x...:xxxxx....:x.....:.x.:...x..x.x.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 87787863 NA +4017 chr4 + 190214555 132650409 132650408 132650594 186 AAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG--------AGAGAGA-----------GAGAGACA-------GAGAGAGAGAAAGAAAGAA---AGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAA chr4 + 94230402 8397369 8397368 8397586 8397369 8397368 8397586 218 AAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGGTAAAAGA ...::......::x..:.....:.x::.x..x.:....x--------...:.x.-----------....::..-------x...x....xx....:...---.......::..x.:..x.:::...:.x...x..:.x....:x:.:..:..:...x....x.x:.....---::.:x........:xx.:....:.::.:.:x.:.::.:x...::. 39M8I7M11I8M7I19M3I68M3I45M 119/186 64.0% 218/94230402 0.0% 32/186 17.2% 124253040 65961515 +3271 chr4 + 190214555 132650511 132650510 132650586 76 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 91538333 NA +4413 chr4 + 190214555 132650778 132650777 132650972 195 ATAATCATAGCT---TCTAAAATATTATTCCTAAAATATAACA----------AAAATTTTATCCAATATTGAGTTTATATTTTGAGTTATATATAAACTCAAATTTATTATATTATATTTATTATATATAATATATATATTATATTTATTATATATAATATATATATTATATATATTATATT-TATTATATATATTATGTATATAATA chr4 + 94230402 26320149 26320148 26320344 26320149 26320148 26320344 196 ACAATCATCACTGAGTCTGAGGCATTGTTC-TGTAATGTAGTGTGTCATTAATAAAATATTTTCTTATAT-GTATTCAAATGTTGATATTTA-ATCAGCTTAAATTTATCTCAC----------ATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:......x:..---...:.:::...:...-.:x...:..:::----------.....x..x..:x....-.x:..:.x..x....xx.x..-..x.:..:........:x:.:----------..:....xxx..:.........x..:......:.......x......:...x.x...x.-....x.xx:....:.:...:..... 12M3I15M1D12M10I17M1D21M1D21M10D59M1I25M 129/182 70.9% 196/94230402 0.0% 27/182 14.8% 106330629 83883926 +3868 chr4 + 190214555 132650842 132650841 132650981 140 ATATTTTGAGTTATATATAAACTCAAATT--TATTATATTATATTTATTATATATAATATATATATTATATTTATTATATATAATATATATATTATATATATTATATTTATTATA-TATATTATGTATATAATATATCTAATA chr4 + 94230402 26320204 26320203 26320344 26320204 26320203 26320344 141 ATATTTTC--TTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .......x--......:..xx.xx.x:..--....xx..:.xx..x.x.x...x.x.:..:.....xx..:x...........x......:.x.....x......:.x.x.x...-......x.xx:...x:.....x..... 8M2D19M2I84M1I27M 99/138 71.7% 141/94230402 0.0% 5/138 3.6% 106330638 83883917 +3664 chr4 + 190214555 132650842 132650841 132651001 160 ATATTTTGAGTTATATATAAACTCAAATTTATTATATTATATTTA-----TTATATATAATATATATATTATATTTATT----ATATATAATATATATATTATATATATTATATTTATTATATATATTATGTATATAATA-TATCTAATATATATTATAAATATATAATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAAT--ATTTTCTTATAT-GTATTCAAATGTTGATATTTAAT---CAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGT--ATATGTAATA ..:.xx..x..:..xx.....x.--.x...x......-:....:.-----.x....x....---:.xx...x......:----..:....xxx..:............:.....x:.x.....x..........x.....-...x.xx.xx:....:.--....:..... 23M2D12M1D7M5I11M3D15M4I57M1I17M2D10M 114/152 75.0% 162/94230402 0.0% 18/152 11.8% 106330659 83883896 +3735 chr4 + 190214555 132650855 132650854 132650992 138 TATATAAACTCAAATTTATTATATTATATTTA-TTATATATAATATATATATTATATTTATTATATATAATATATATATTATATATATTATATTTATTATATATATTAT-GTATATAATATATCTAATATATATTATAAA chr4 + 94230402 26320213 26320212 26320346 26320213 26320212 26320346 134 TATATGTATTCAAATGT------TGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGA .....:x.:......x.------.x.......-.:.xx.xx...x...x.xx:..:.x...xx..:...x........:......:.x............:...x.x..-......xx.xx:.x.x:.....:.x...:. 17M6D9M1I76M1I30M 94/132 71.2% 134/94230402 0.0% 8/132 6.1% 106330642 83883913 +4282 chr4 + 190214555 132650871 132650870 132651012 142 TATTATATTATATTTATT---ATATATAATATATATATTATATTTATTATATATAATATATATATTATATATATTATATTTATTATATATATTATGTATATAATATATCTAATA-TATATTATAAATATATAATATATATATTATA chr4 + 94230402 26320205 26320204 26320344 26320205 26320204 26320344 140 TATTTTCTTATATGTATTCAAATGT-TGATATTTA-ATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTAT----TGTATATGTAATA ....x.x......x....---..:.-.:....x..-..:.xx..x.x.x...x.x.:..:.....xx..:.........x..:......:.x...:.x...x..:.........-......x.x.:...----.:.....:.x... 18M3I4M1D9M1D78M1I14M4D13M 103/136 75.7% 140/94230402 0.0% 10/136 7.4% 106330666 83883889 +3142 chr4 + 190214555 132656589 132656588 132656649 61 GTCTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGTTTTTGACTTAAAGTTTGTTCTAAGTA chr4 + 94230402 69093777 69093776 69093837 69093777 69093776 69093837 61 GTGTTTTTTTTGTTTTGTTTTTTTGTTTTTACAGTTTGTGTTACAATGTTTGATCTAAATA ..x........x....x.......x.......x....x..x:x:..x.....x.....:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 63562812 NA +3417 chr4 + 190214555 132676687 132676686 132676747 61 GTGCACCTGTAATTCCAGCTACTCAGGGGACTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:...........:::::.:.....x.xx.x...x.:...........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 56643483 NA +3109 chr4 + 190214555 132708418 132708417 132708488 71 CTACATTCAAGTTTTCAAGTTGCAGATCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 4825123 4825122 4825193 4825123 4825122 4825193 71 CTACATTCATACTATGGACATGTAAACATATGCTTTTTTTTTTTTTTTTTCCTTCTGCCTTTCTTCTTTCT .........x::.x.x:.xx..:.:.:x...x..................::..:.x::...:..:...:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 127883295 62331260 +3096 chr4 + 190214555 132708421 132708420 132708507 87 CATTCAAGTTTTCAAGTTGCAGATCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCATT chr4 + 94230402 14492227 14492226 14492313 14492227 14492226 14492313 87 CATGCAAATCCTCAAGGTATGGGTAAATGCATGTTTTCTGTTTGTGGTTTTTTTTTTTTTTTTTGTATTTTTAAGCAAAATCACATT ...x...:.::.....x.:::.:.xx..x.x.x....:.x...x.xx.................x.x...xx.::.::.:..x.... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 118216194 71998361 +16221 chr4 + 190214555 132716342 132716341 132716694 353 TGCTTTCAAAATATGCCTTTGAGAATTCAAGCTATAGTTT-GATATAGCATTTAGGTCACTGTTCTAACTTACATTGAATTTAATCACGAGGTCACTTGAACCAAGCAGCTTTGCTGTTTCTAATCTACTAACTGCACATTTTCTCTGAGATTGGATAGGACCATTCCTATTAGGATTTCTGACACAGAAGGTCAATAATTCTTTATTTCATCCATAATTTTGTATTTTATTGTCCTACACCTCTCAAAAGTTTTACAGTTTTTGTGGAGAAAATGAAATCTCCTATCACTA-AACCAGATTGCTATTTTCTTGTCTTCTCTATGTTATCATGGGACTTATTATTCTTTTCTCCC chr4 + 94230402 27835690 27835689 27836034 27835690 27835689 27836034 345 TACTTTGAAGGTATACCTTTGAGAATTCATATTGTGGTTTTGATATA---TTTGGCTTAGTCTTCTAAGTTATATTGAATTTAATCATGGGGTCACTTGAGCCAAGTAGCTCTGCTGTTTCTAATCTACTAACTGCACATTTTTGCTGAAATTGGAGAGGACAAGTCCTATTAGGATTT-TGACACCATAGGTCAAGAAGTCTTTATTTCTTCTATAATTTTATTTTTCATTGAGCCATGTTTTC---AGTTTTCCCAGTTCATACTGGTAAATTGAAATCACCCATCACTGCAGCCCGATTG---TTTTCTTATTTTCCTCATGTTGTGTTGAGGGCAGTTGCTCTCTTTCCTC .:....x..::...:..............x::.:.:....-......---...:.x.:.x.x......x...:..............:.:..........:.....:....:...............................:x....:......x.....x.x..............-......x:x.......x..x..........x..:........:.x...:....xx.:.::::.::---.:x...:x.....:x.::x.:x...x.......x..:......:-.:..x.....---.......:.:...:::.....:.xx..:.:x:x:..::...:..::.:. 40M1I6M3D129M1D65M3D44M1I10M3D49M 259/343 75.5% 345/94230402 0.0% 12/343 3.5% 104880652 85333903 +3177 chr4 + 190214555 132764875 132764874 132764947 73 TGCGCCTGTAGTTCCAGCTACTCGGGAGGCTGAGGTGGGAGGATGGCTTGATCCCAGGAAGTCAAGACTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x................:.::........x:xx.x.:.xx:.....x.....:.:x.:x:.:...:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 56731670 NA +7215 chr4 + 190214555 132806869 132806868 132807191 323 AATGACAAAGTTAGAAATGTTAATTGTATGCTCTCATCTAGCCTCATTATTATCTTTGTCTTCAGAATAAGTTAATTTTGTGCATTTTTTTCTTCTCATTATAATGCTTGTCATAGGAGAGAAGAATTAGAATCACAATAATGAACAACAGAGTTTAGC-ATTATGGTACTGTTATTGGTAACTTTGGTAATACTTCATGTTTGTACTTGATTTTCTTGCAATGTTA-TTGTGCCTATCAAATTAACAA-AGCTGTGAATATGAACTCAAACA--TGATACCATTGCAAAGAAATATCTTTCTATTCTCTTGCTTTTTTTAGCTTACA chr4 + 94230402 27861114 27861113 27861434 27861114 27861113 27861434 321 AATGACAACTTTGAGACTGAGAATTGGATGTAATCATCTCACCTCATTACTATTTTCGTCATGAAAATAAATCAATTTTCTATA-TTTTCTATTTTCATTACCATATTTGTTAGAAAAGGGAACTATCAAAATTCTAATAATACCTGATGTGCTTTGGTAATTATGGTACTATGCTCAT--ACTTTGACATT--TTCAATCCTGCATATGATTTGCTGGCCATTCCACTCCTCCCTGTCAGGTTAATAATGGTTATAGACATGGAATCAACTAGTTGAT-CTTCTACAAAATGTAATTGCCCTATT-TCATCCCTTTTCCAGTTTTCA ........xx..:::.x..xx.....x...:xx......x:........:...:..:...x.x.:.....:.:......x.::.-....:.x..:......:x..::....:.x.::..:...xx..:.:...:x:......:xx::.::x:x...:.:-...........:.xx.::x--......::.x.--....xx::..:.:x......x..x..x..x::.-.:x.x...:...::....:..-:.:.:.::.:...:.x....x:.--....-.:x:.:....:x:xx..:x::.....-..x.x.:....::..:..x.. 84M1D74M1I19M2D11M2D33M1I21M1I23M2I4M1D26M1D21M 201/316 63.6% 321/94230402 0.0% 12/316 3.8% 104945755 85268800 +12445 chr4 + 190214555 132824043 132824042 132824793 751 TGCCAATTCATTGAATTTTCATTTTATTTT---ATATCTCATCCTGCCAATTTGTTCACATAGAATTCAAG-------TATTTTAAATTTGTTATCATCTTTGAAGCAATATCTTAAATTAACCT-CATAATTTGGAATAAATACAGAATAGGAGCAACACTATATTTTGATAAGAACATATTCGAC-----TTGCCATGACAAACTAAACCTTTTTAATAGCTCAAT--TTATT----------AGGATAAAATGGCAACA----------TTATAGTTCCCACCAGTAAGTAAAAATAGTATGGTCATAATAGAGAAATATAATGATAAGATGAGAGA------GAATCTTATAATGTCGATGCCTGAAAAC--------------------------TTCTGAAAAATCCTCACCAATTGAAGCTTTTATAAGCTTCTAATTGTATTGTGATAAATGCATCTGTCTGGTGTAGA--GAACTATCAAC-CTAAGTACATGTGCAGCAGCGAAAGTTGAGTTCCTTACAGA-----------GAAAATCTATAATTTTATAATAAAAAAGCATTCACTGCCTTCCCAAACATAAAGA------ATAATTTTAAAGATTAAA---ATAAAAGCTTCAGAACACAGTTGCACATTTTCTAATGGAATGACAAACTTGTTTCCACTCTAGAAAGCATTTTTGACAAAGTTTCATACTTGAGGTTAATGACAATGTCTTAAGGGCATGAGTC-TTGAATGAGAGTAGAGTTGGTTCCTAAAACTG-AAGGAAAAAAAAGAAAAAAATATATATATAATGACACAGTCC--AGGGCAGTAAATAAGAATAAA chr4 + 94230402 27875788 27875787 27876592 27875788 27875787 27876592 805 TGTTAAGCCAATACATTATGGCTTTATTCTCAAATATCTCAGTCTTCAGCTTT---CACGTAG--TTCAAGCTTTCTATATTTCAATTTCCTTGTCATGTTTAAAGTAATATATCAAGTTGAGTTGTATATTTAAGTCCAAACATGGAACAGGTGCATCTTTATGTTTTGACTAGGAAACATTAGTCAGCTTTTGCTAC-ACAGCCTAAAATCTTTTCAAAATATAATGCTTGTTGCAGGGGAGCAAATTAGAACAGCAACAACAACAAAAGTCATATTTCCTACCTTTCAGCAAAGTGGAGGTGGTAATGATC----CTTCAAATGGCAAGATGATAATTGCCATGTAATGTATAATACCTTTGCTTGAAGGTGCTTTTTGTTTTCTTTTTACCACCTTTTCTGAAAGACAGCAGTAAATTAGGTATTATACAA------AATTTGAATGAGCAGAGTGCA--------GTGTTGCCTGAACT--CAACACTAAGC-CAGGCGATG----AAAAGTTCATTTTATGTCAGAATCACAGTGCTGAAGAT-TCCAGCTAGAAATCAAACAGACA-----------CCTGAGGATAAAAGGTGATGATAATGTTGAAGATTAAATGAAGAAATGCTTCAGAACATAATTCCACATTTTCTAATGAAATGACAAAGTTGTTTCCACTTTGGAAAGTGCCTTTGACAAGGCTTCGCATTTGAGGTTAATGTCTCTGTCTAAAGGGCAGGAGTTACAGAATAAGAGAAAATTTGCTTCAGAAAATTACAAGCAAAATGAGGAAAAACAAGTGAGTAGTTTTAAGTGATCCATAGAACAGTAAATAATAATGAA ..::..x:..x.:x...x.x::......:.---........x:..x.x:x...---...:...--......-------.....:..x..:x..:....x...:...:.....x.:..:..:.x:.-:...x..x:.xx:...:.::...:...x...x.x:...:......:x..:.x.:...x.x.-----....:.:-...:x.....x::....x.x.::x:...--..:..----------.::x..:..::......----------.:...x....:...xx.x..:...:xx::x:....x..:..x----xx.xx....::.......x.:x------.x.x:x......::.xx...:....:::--------------------------........:.:xx:x::x....:::xx..x..:..------....xx.x..x.xx:.:....--------....x.x--.....--....-.....:-..x.:.xx.----:......x.x..:x.xx....-----------...:..-.x:.::.xx.x.x:...x.::..-----------..::.:x.....::------.....x..:.........---.x...x...........:.:..x..............:.........x...........:.:.....::::........:.:...::.:............x.xx.....x.......x....:-:x....:....x.:.x...x...xx....:.:-...x....x:.:......x.x:.:x:..xxx.x.x::::...--..::..........x...:.. 30M3I20M3D7M2D6M7I47M1I61M5I7M1D28M2I5M10I17M10I42M4D22M6I28M26I35M6D21M8D7M2I5M2D4M1I6M1D9M4D21M11I6M1D23M11D14M6I18M3I124M1I32M1I42M2I21M 477/708 67.4% 805/94230402 0.0% 140/708 19.8% 104948255 85266300 +10484 chr4 + 190214555 132832639 132832638 132832986 348 TGCTTTGTATTAGAATAATATTACCATGCTTTGCAAAATTCTAAATGCACCACTGAATTAAAATTCTAAATAATCTATT---TTTAATATGACACATTCACAGATACCACAATGAAAATGTGACATTTTTAAAATTTATCTGATCCTACTTAAAAAAAATACCTAAGACATAAATTAATTCTTCACCTTCAGTACTATAATA-TGTGACTAAAGCGTTAAGAAACTTTTAGTAACCTCCATTAATTTAGTAGTTCT-CTTCTTTGAAAATGAATAAAAATGCAATCATGTGGAAGTTTGTATTAAT-AGAGGTGTGGGAGAGAGTATCTATATGCATGTGTAATTACACATACA chr4 + 94230402 27878594 27878593 27878923 27878594 27878593 27878923 330 TGGTTTGCATGAGAAAGAGCTCATTATGTCCCACATGATCCCAAATGCCCAGCAGAGATAACAGTCTAAATCATTTGTTCTCTTTAAAATAATTTATTCATAGGTAGGAATATGAAAATGTGCCCTTTATGAAGTTTATCTGTATCT--TTAGCAAACACAACT------TAAATTAATTCTTCATCTCCAGGACTGGGAAAGTTTGACTAAGGCATTAGGGATTTTTTATTAACCTCCATTAATTCAGTAGTCCTACCACTTTGGTAACCAATAAAAATGGACGGCTAAGGAGTTTTCTCTTATTAAAAGGTGTGAGTGA----------------GTGCAATTAAACATGCA ..x....:..x....x:.xx.:.::...:::::..x:..:.:......x.x:.x..:x...x.x.......x..:.:..---.....x..:.:x:.....:..:..xx.xx...........x.x...x.:..:........xx:..--...:x...x.:.x..------...............:..:...x...:x:.x.-.x.......:..:...:.:.x:.....x...............:......:..-.:x.....:x..:x..........x.xxxx.:x...:x...x.x...x.-.:.......:.x..----------------...:.....x....:.. 79M3I65M2D15M6D32M1I53M1I49M1I14M16D17M 229/324 70.7% 330/94230402 0.0% 30/324 9.3% 104954045 85260510 +3091 chr4 + 190214555 132869621 132869620 132869689 69 AAAAAAAAAAAAAAAAAAAAGAAGAAGAAATCCTAAAAGCAGCAAGAGAAAATAAACAAATAACATACA chr4 + 94230402 34284101 34284100 34284169 34284101 34284100 34284169 69 AAAAAAAAAAAAAAAAAGAAGAGGAAGAAATCACAGAATCAAGGTTAGAAGAGATCAAGATCACATCCA .................:....:.........x:.:..x..:x:xx....:.x.xxx.:..x....x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 98585520 91629035 +3463 chr4 + 190214555 132883711 132883710 132883786 76 AGAAGAGACAGAGAGAGAGAGACAGAGAAACAAAAG------------AGAGAAAAGAGAGGGAGAGAGAGAAAAAGAGAGATAGAAG chr4 + 94230402 51148386 51148385 51148473 51148386 51148385 51148473 88 AGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGG .....xx...............x.:.......:...------------.x:...x.x:.....x......:.....::..:.x:..:. 36M12I40M 58/76 76.3% 88/94230402 0.0% 12/76 15.8% 81735325 NA +3074 chr4 + 190214555 132883713 132883712 132883822 110 AAGAGACAGAGAGAGAGAGACAGAGAAACAAAAGAGAGAAAAGAGAGGGAGAGAGAGAAAAAGAGAGATAGAAGTA-------GTAAAGAAAAAA----CAGTGTGCTCTATTCCTTTAAA chr4 + 94230402 42361550 42361549 42361670 42361550 42361549 42361670 121 AAAGAACAGACAAAAAGAAACAGAGATACAAAAGAAACAAAAGATACGGAGATACAAAACTAAACATATGGGGACAAAATGACATAAAGATACCATTTTCATTGGGTGCTACTATTTTAAA ..:::.....x.:.:...:.......x........:.x......x.x.....x.x.:..xx.:.x.x..:.::::.-------:......x.xx.----..x..x.:x...:.x:...... 76M7I12M4I22M 74/110 67.3% 121/94230402 0.0% 11/110 10.0% 90522163 NA +9195 chr4 + 190214555 132889950 132889949 132890301 352 TGTTATTATAACACAAAT---TATACGACCTT--AGTCTCACCAGGCTGTATATTCAAAA-TCTAGGTTATTTATCTATACTTTGTGTTTCAAGTTAAGATTTTGCTGAAATTGCGAGAAAAGAGATTGAGTTATAGTTCTTTCTTCAAAAAAAGTGAGATCCGAAACATGTA-ATTTG--AAAGAGATAGCACAGGTTCCACTTTATAT---AGTAAGCAGTTTCAGTATGCTTACCATATAAATACTCTGCTAAACTTGTACTTGCAAGTCTGGTTAAGGTTAGGAAAAGATCTATATCAACTTAATGAATATACTTCTGCTGACGTACTCAGAAAAGATAGTTTGAATTATAAGATGTTAC chr4 + 94230402 27895826 27895825 27896175 27895826 27895825 27896175 350 TGTAAGTACTACACAAATACACATACATTTTTTAATCCTTACAGGGATGTCTATTGAGGGCTCAAAATTACTTATCTATG--TTAGTTTAGAAGTAGGAATTCTGCTGAAATGAGAAGAAAGAAAATTGGATTACAAGTCTCTTTCCAAAAAAG--------CCAAATATGTGTATTTGGAAAAGTGTTAAAAGAAGCTGAACTTTCTATTAAAGTAAGCAATATCAGTACATTTACCATATAAATATACTGCTAAATCCATTCTTTGGTGAATGCTTACAGACTGAAAAAGATCCATATCAAGTTAATGAACTCTAGTCTGCTGACTTA--CAGAAAAG--AATATAAAATAGAAGAATCTAC ...x.x..:x........---:....:x::..--.x:..:..x:..x...x....x.:::-..x.::...:........:--..:xx..xx....x:::...:.........x:x:.....::.:....::...:.:x...:.:.:.......:--------.x...:....:-.....--....x.x..:x.x.:.:.xx.....x...---........:.x......:::..............:x........::::.x...xx:x.xx..x...x:.x:x.:........:.......x........:x:xxx.........x..--........--.:.x.:..x..x....xx:... 18M3I11M2I26M1I19M2D72M8D11M1I5M2I29M3I117M2D8M2D22M 232/338 68.6% 350/94230402 0.0% 26/338 7.7% 104994124 85220431 +3286 chr4 + 190214555 132891343 132891342 132891425 83 CATGGTGGCGCGTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGACCAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:..::.--....:.:.......:...::........x.xx.x...x::........::.:..x::x:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 56858146 NA +3000 chr4 + 190214555 132929472 132929471 132929522 51 TATGTATGTATATATATATACACACACACACATATATAAACTCATGTACTA chr4 + 94230402 73817037 73817036 73817087 73817037 73817036 73817087 51 TATTCATGTATATATATACACACACACATGCATGCAGAAGCTCAAATACCA ...x:.............:.........::...::.x..:....x:...:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 59112435 NA +3081 chr4 + 190214555 132997813 132997812 132997877 65 TATAGTCCCAGCTACTTGGAAGGCTGAGGTAGGAGGATAGCTTGGGCCCAGGAGTTTGAGATTGT chr4 + 94230402 76033211 76033210 76033275 76033211 76033210 76033275 65 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT .:....:...........:.........x:xx.x.:.xx:....::.....:..:..x:.::... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 56964602 NA +3051 chr4 + 190214555 133010810 133010809 133010924 115 ATATACATATACATATATACACATATATACACATATATATACACATATATATACACATATATACACACATATATATACATATATACACACATATATACATATATACACATATATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x.:.x.......:.:.::x:x.:.:x:.::..x.....::..x:.:......x.:.:..:x:.:..:...:..:x...::x.x:::::....:.::..:x...::...::.:. 115M 63/115 54.8% 115/94230402 0.0% 0/115 0.0% 111901623 78312932 +3308 chr4 + 190214555 133010827 133010826 133010935 109 TACACATATATACACATATATATACACATATATATACACATATATACACACATATATATACATATATACACACATATATACATATATACACATATATATACATATATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.::x:x.:.:x::::.:x.....:...x..:......x.:::..:x.....:...:...x..:::x.x.:::.....::::..:x....:...::.:.. 109M 62/109 56.9% 109/94230402 0.0% 0/109 0.0% 111901633 78312922 +3348 chr4 + 190214555 133010868 133010867 133010978 111 ATATACACACATATATATACATATATACACACATA--------------TATACATATATACACATATATATACATATATACATATATATACATATATATACACATATATATACATATATACACA chr4 + 94230402 25906335 25906334 25906459 25906335 25906334 25906459 125 ATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA ....x..x....:x....x.x:...xx..x.x...--------------..:.:..x.:.x::....:..:..x.::.::...:x.x...x........x......::x........xx...:.. 35M14I76M 75/111 67.6% 125/94230402 0.0% 14/111 12.6% 107104533 83110022 +3209 chr4 + 190214555 133010877 133010876 133010964 88 CATATATATACATATATACACACATATATACATATATACACATATATATACATATATACATATATATACATATATATACACATATATA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ..:.x.x..x..x:x.x..........x:....::.x......::...:.x.x....::....x.:.:::.:.....:..:::.::.. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 110410696 79803859 +3758 chr4 + 190214555 133010887 133010886 133011018 132 CATATATACACACATATATACATATATACACATATATATACATATATACATATATA--------------TACATATATATACACATATATATACATATATACACATATATACATATATATACACATATATATACATATATATACA chr4 + 94230402 25906314 25906313 25906459 25906314 25906313 25906459 146 CATATACTCACAATCTTGAAAATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATAACTACGCA ......:x....xx:x.:x.x....x:.x....:x....x.x:...xx..x.x...--------------.......x.:.x::....:..:..x.::.::....x.x...x........x......::x........xx..::.. 56M14I76M 88/132 66.7% 146/94230402 0.0% 14/132 10.6% 107104573 83109982 +3145 chr4 + 190214555 133010954 133010953 133011024 71 ACACATATATATACATATATACACATATATACATATATATACACATATATATACATATATATACACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .....:....x:....::.x......::.....x.x....::.:..x.:.:.:::.....::.::...:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 110410756 79803799 +3378 chr4 + 190214555 133012610 133012609 133012684 75 TGCCATTGCAATCC-AGCCTGGGCAACAAGAGTGAAACTCAGTCTCAAACAAACAAACAAACAACAACAAAAAAAA chr4 + 94230402 54371634 54371633 54371709 54371634 54371633 54371709 76 TGCCATCTTAATTTTGGCATAGGCAGCCAAAGTAACAGTCATTGTCCAAAAAACAAACAAACAACAACAACAAAAA ......:x:...::-:..x.:....:.x.:...:.x.x...x.x..x..x....................x..... 14M1I61M 56/75 74.7% 76/94230402 0.0% 1/75 1.3% 78640976 NA +11646 chr4 + 190214555 133036870 133036869 133037051 182 AAAACAGCAGCATTTAATGGCACTATTAACTCAAGAACCTAAAACACCAA-CTACATTAATTATATTCATTATACTTAATTGAACATAATCATCTAACCTAACAATTCCTTGTACACTAATTAATAAAACAGCATGTCTTCTGGATTAGAAATATACAAAAATAGCTGTTCTTTATGAGATAA chr4 + 94230402 27938532 27938531 27938711 27938532 27938531 27938711 180 AGAATGGAAGCATTTAATGGCACTATTAACTCCACCACCTAAAACCAGAATCTATATTAATTACATTCATTATACTTAATTGAACATAATCATCTAACCTAACAATTCCTTGTACACTAATTAATAAAACAGCATGTCTTCTGGATCAGAAATGCATTAATTTA---TTTCTTTTGAAGGTAA .:..::.x........................x.xx.........xxx..-...:........:..................................................................................:......::.:x..xx..---x......xx:..:... 50M1I113M3D16M 155/179 86.6% 180/94230402 0.0% 4/179 2.2% 105098338 85116217 +3229 chr4 + 190214555 133038772 133038771 133038829 58 TTCATTGTGTGTGTGTGTGTGTGTATATACACACACACACGTATATATATATATGTGT chr4 + 94230402 34522007 34522006 34522064 34522007 34522006 34522064 58 TTCTTTGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGT ...x............:.....:..........x.x.xx:xx..:......x...... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 98516765 91697790 +3155 chr4 + 190214555 133038778 133038777 133038835 58 GTGTGTGTGTGTGTGTGTATATACACACACACACGTATATATATATATGTGTCCATCA chr4 + 94230402 68837095 68837094 68837152 68837095 68837094 68837152 58 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCA .....:.............:.:...x.:...:..:..:.:..::.:.::.x.::.... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 64201683 NA +3052 chr4 + 190214555 133062774 133062773 133062834 61 TGTTCAGAGAAAATAATCTGAGTTTTATTTCTTAAAAGCTCTAAGATTAAGAAAAATAATT chr4 + 94230402 26613189 26613188 26613249 26613189 26613188 26613249 61 TGTTTAATGAAGATGACACACGTTCTTTTCCTGAAAAGCTCTAAGATAAACAAAAATAATT ....:.:x...:..:.:x::x...:.x..:..x..............x..x.......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 106449585 83764970 +3035 chr4 + 190214555 133087720 133087719 133087789 70 TTAAAACTAAGAAAACAAGACTGAATATAAAATGATGTTAAAAATAAAACCATAAACAAGCACAAAAAGA chr4 + 94230402 43574230 43574229 43574299 43574230 43574229 43574299 70 TTAATTCTGAGGAAAAAGAAATAAATGAAAAAAGGTGGTTAAAATAAAACCAAAAACAAACAAACAAAAA ....xx..:..:...x.::.x.:...:x....x.:..x.x............x......:..x.x...:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 89513490 NA +13076 chr4 + 190214555 133131746 133131745 133132125 380 AAAGGTGAAAACTTAAAGTGAAATCAAATGGGACATAG---GAAATCAAATGAGTTTAAGGATTTAACTATAACCATGGAATAAAAGGTTATTCAGTTTTGCAAATTCAAAGCAGTCTCTGACGAGTCTAATTTAATGAATAAAATTCTTGTTTCTTTTACAATAGACCTTTAAACTATTTCTACTCAGCAGTCTTAAAATGATTTCATTAGGAGGTACTGGAGTTATTGAGCTGAAATGGCAGCTGCTGTTTTTCTTAGTTTCCTTTATTCCATAAAAGGAT--TGGTAACTTACATTTGGCTTCAAAACACTTCACTGGCAAC--TCCCCTCTGCTTTTGTTTCTCTCCCAAAAGTTTAATCTAATTTAGAGTTTTCAAAGGAGA chr4 + 94230402 27966324 27966323 27966692 27966324 27966323 27966692 369 AAAGGTGAGGCATTAAA-------CATGAGGAACAGAGCCGGAAACCAGATTACCTAAAGGGGTTAACTACATTCCTGGAATGATACTATATTCATTGTTGCAAACGCAAAGCAGACTCTGACAAGTCTAATT-AATGAATAGAATTCTTGTGTCCTCTACAATAGACCTTTAAACTGCTCCTGCTCAGCAGGCTCAGAATGATTTCACTGGGGGGTACAGGGGCTATTGAGCTGGAATAGCA---GCTGTTTCACTCAGTTTGCCTCGCATCATACCAGAATCCCAGTGAGTTTTGTACTGCATCACAGTACACCTATGCTAGCATTCCTCTCACCTCTCGCCTTT------GAAAGTGAATTTAA-TCATAATATTCAAATGGAA ........::xx.....-------..x:x..:...x..---....:..:..x.x:.x....:x.......:.x:.x......:.x.xxx......x.x.......:x........x.......:.........-........:.........x..:.:...................::.:..:........x..:.:..........:.:..:.....x..:.:..........:...:...---.......:x..:.....x.:.:::x:....xx..:..--::..:.x..x::.x:x..x...x.::..x:.xx..x:.:.--...:...xx..:.:.::.:.------:..:x.x...:...-.:.x.:.x......x.::. 17M7D14M3I92M1D109M3D37M2I40M2I20M6D14M1D19M 257/362 71.0% 369/94230402 0.0% 25/362 6.9% 105165422 85049133 +3046 chr4 + 190214555 133136309 133136308 133136353 45 ATATATTTGTTTGTTTGTCTGTTTTGTTTTGTTTTTTGTTTGTTT chr4 + 94230402 72938544 72938543 72938588 72938544 72938543 72938588 45 ATATGCTCGGTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT ....::.:.x......x.:......................x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 60197765 NA +3107 chr4 + 190214555 133136314 133136313 133136367 54 TTTGTTTGTTTGTCTGTTTTGTTTTGTTTTTTGTTTGTTTCTTCAAGATGCAGT chr4 + 94230402 79014400 79014399 79014453 79014400 79014399 79014453 54 TTTTTTTGTTTGCTTGTTTTGTTTTGTTTTTAACTGGTTACCCTAAGAAGCAGT ...x........::.................x::.x...x.:::....x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 54121914 NA +12576 chr4 + 190214555 133143780 133143779 133144168 389 GTTTTGTATCACTAT---CAAATAAAAAGTAAAAACATTGGGTAAGGAAAAAAAAGAGCTCTTTCTAGACAACTTCTCTCTTACTCATATGAACTTGATCAGGACTTGCAATTAATTTTTGAAATTGTTCTGTATAGACCTCTATATTTGAAGCTTCATTTTCTGTCTCTGGGCCATGTCAGTAAAACCCACACATCTCCCTGTTAAGCAAAGCAGCTGGCTTTTT--AAATGTGATGTCTTTTAGTTCTTATTTACAATCCTAATCACATCATTGATTTCAGTAATCTTTCAG----TAAAAGTAGTTATTAATGCTGTCAAAAG---CAGAAACGGGGATTCAATGTTGTTTTCTCTTTTTTTAAATAAACCTGGATAATTAAGATTAAGCCTAATAAT chr4 + 94230402 27981486 27981485 27981855 27981486 27981485 27981855 370 GTTTTGTCTCCTCATTGGCAATTAAGAAAGAAATCCATTGAGGGAGTGGTGGCAGTGAACCTTTCC-----------CTCTGACACAAATAACCTTAATCAGGCCTCTTAGTTAATTTCTGAAATTGTGCAGTATCGACCTCTGT--TTGAAGCAGGATTTTCATCCTATGG-CCCTTTCAGTAACACATACACATCTTCCAGTTA-GCAAAGCAG---GCTTTTTCTAATGGTGACATCTTTTAGATCTTATTTACAGTCCTAATCACATCATTGATTCCAGTAATCTTTCTGGCACTAAGAGCCGTTATTAATTCTCTCAAAGGGGCCCTGGGTGGGGTTTGTATATATTTTT-------------TAAACCCAGATAATTCAAATTACACCAAGCAAT .......x..x::..---...x...:..:x...xx.....:.x:..x::x::x.:x::x:.....:-----------....x..x..x..:.x...:......x..:x:.:.......:.........x.x....x.......:.--.......xxx......xx:..x...-..x.x.......x..x:........:..x....-.........---.......--..xx....::........x...........:....................:............x.----...:..:x.........x..x.....:.---.xx::::....x..xx..:.xx....-------------......::.......x.:....x:..x.::... 15M3I48M11D68M2D25M1D33M1D9M3D7M2I66M4I28M3I26M13D33M 266/358 74.3% 370/94230402 0.0% 43/358 12.0% 105162294 85052261 +3170 chr4 + 190214555 133144853 133144852 133144905 53 ATATGCACACACACACATATATATATGCATATGTATACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:..:::.::......:..x...:x:........:.....:........... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 109897131 80317424 +15292 chr4 + 190214555 133144907 133144906 133145213 307 ACACACACACTTTGGAATCAGTATC----ACAAACCAGTGCCCAATTTAAAAACATTCCT--GGACCTCTTATTGATCAATTTCTCTTACAGAAAGGAGCAGAGTATAGTATCTGAACTGAAACAGTATTATTAGAAAATGATATTGTGAGCATTAGGATGTATAATTCATGTTGCTTTCATTTGCTCAGACCATTGT-AAAAATCCATAAATCATTTT-TTGTTCATG-TATTGCTTAAGTGCAATTTGTCATTTTGCATTAGAGGGCTGCTTCAGCTCATTCAGTGCTTTTAATTCACTGTTTAGAGTTTAACA chr4 + 94230402 27982892 27982891 27983204 27982892 27982891 27983204 313 ACACACAAACCTCGG--CCGGTGCCTGCAGCAGATACGCACCCGGTTTAAAGACAGCCCTCTGAATTTTCATTTAATCAATACCCCCTATCGAAGAGAGCGGCGTAGAGCATTAGAACTAAAACAGTGTTATTAGAAAATGATATACTGCACATTAGGATGTATAATTCATGTCGCCTTCATTTGCTCAGACCGTCGTGAAAAATCCATAAATCATTTTCTCGTTCATGTTATTGCCCAAATGCAATTTGTCATTCCGCATTAGCGGGCTGCCTCAGATCA-GCGGCGCTTTTAATTCACCGCTCCGGGTTTAATA .......x..:.:..--:.:..::.----:..:.:xx.::...::......:...x:...--.:.::.::xx..:......x:.:.:..:x...::....:.x...x..:..:x.....:.......:.................xx..x:......................:..:................:.:..-....................-.:.......-......::..:..............::.......x.......:....x...-x.:.:.............:.:.:x.:......:. 15M2D8M4I31M2I136M1I20M1I9M1I51M1D34M 235/304 77.3% 313/94230402 0.0% 12/304 3.9% 105162015 85052540 +100507 chr4 + 190214555 133149099 133149098 133151514 2416 CTCGCTCTCAC-ACTCACACTCACCCCGGCCGCTCGGGCGAGAGTTCTGTCCCGCCCCGCCCGGCTGCCGCGTGACGT-GTCTGTTTGGCGGCCAGTTTGGCCAATCATCGGCAGCTCG-GTGGGTGGTGCTCCTGGGCGATTGGTTGGCAGAATGAGGGCGCTGCGCAAAAACGGAGAAGCCGAGCGCTCGGAGCTCAGAAACTGCCAGCCCAGACCACAGGCTCAGAG----GCTGAAGCAGGA--GGAAGGAAGG--------------------ACTGGAAGGAAAAAGAGACAGGTTAGAGGGAAAGAGGCTTGGGAAGAAAACAGCAGAAAAGAAACTGCTCATTACACTTACAGAGAGGCAAGTAACGGTGGAGATGAGGACAGAGGGAACCAAGACTCTGAAAGACAAAAAATACAAATAGAGCGAAAGAGGAAAAAAATGTC----------------AAGAAGAACATCCATCCGGAGAAATGAAGAGAATGAAAGTTTTAAGCTGCAGAGCCGTTCTGTGCT-TTTCCGGCACAAAATTATATCGCTGATTTTAAGCCCTTTTGCATTTGCCAGCCGTTGACATTAAGAGGCATGTTTAACGGTGCCAACAGCATCTCCTTTTCCTTCTCCTCTTCCTCTTCT-----TCTTCTTCCTCCT-----CCTCC------------TCCTCTTTTTCCTCC---------TCCTCGTTCTCCTCCCATCAGCAAGAAGACAAACCGAGGACAGTCTTGAAATATCGAAATTTCCTCTTTGGGATTTGC----------------------------------CAGCGCCAAGACTGTCGGAATAAA-GGACGCTGACTATTGTATTATTGTTATT------------------TTATTAATTAGTCAGTGG----AAAGATTACAGATGAGGAAAGGGGACGCCTGTCACCCTTCCTGTGCTAAGATTTAAAAAAA--------------------AATGAGGCTGGATTGCGGGAAGCTCTAAAATGAAGCAAAAGGAGTAAGATTT------------TTAAAGACAGAA-------------------------------------------------AGCCACAGGAGCCCCCAC---------------GTAGCGCACTTTTATT------------------------TGTATTTTTTCAGATTTTTTTTTGTTTCGTGGTGGTGGGGGAGGTGATTGG--------------GTGGCTGACTGGCTGCGGGAAGCTACTTCCTTTCCTTTTGGAGATGATTGTGCTATTATTGTTTGCCTTGCTCTGGATGGTGGAAGGAGTCTTTTCCCAGCTTCACTACACGGTACAGGAGGAGCAGGAACATGGCACTTTCGTGGGGAATATCGCTGAAGATCTGGGTCTGGACATTACAAAACTTTCGGCTCGCGGGTTTCAGACGGTGCCCAACTCAAGGACCCCTTACTTAGACCTCAACCTGGAGACAGGGGTGCTGTACGTGAACGAGAAAATAGACCGCGAACAAATCTGCAAACAGAGCCCCTCCTGTGTCCTGCACCTGGAGGTCTTTCTGGAGAACCCCCTGGAGCTGTTCCAGGTGGAGATCGAGGTGCTGGACATTAATGACAACCCCCCCTCTTTCCCGGAGCCAGACCTGACGGTGGAAATCTCTGAGAGCGCCACGCCAGGCACTCGCTTCCCCTTGGAGAGCGCATTCGACCCAGACGTGGGCACCAACTCCTTGCGCGACTACGAGATCACCCCCAACAGCTACTTCTCCCTGGACGTGCAGACCCAGGGGGATGGCAACCGATTCGCTGAGCTGGTGCTGGAGAAGCCACTGGACCGAGAGCAGCAAGCGGTGCACCGCTACGTGCTGACCGCGGTGGACGGAGGAGGTGGGGGAGGAGTAGGAGAAGGAGGGGGAGGTGGCGGGGGAGCAGGCCTGCCCCCCCAGCAGCAGCGCACCGGCACGGCCCTACTCACCATCCGAGTGCTGGACTCCAATGACAATGTGCCCGCTTTCGACCAACCCGTCTACACTGTGTCCCTACCAGAGAACTCTCCCCCAGGCACTCTCGTGATCCAGCTCAACGCCACCGACCCGGACGAGGGCCAGAACGGTGAGGTCGTGTACTCCTTCAGCAGCCACATTTCGCCCCGGGCGCGGGAGCTTTTCGGACTCTCGCCGCGCACTGGCAGACTGGAGGTAAGCGGCGAGTTGGACTATGAAGAGAGCCCAGTGTACCAAGTGTACGTGCAAGCCAAGGACCTGGGCCCCAACGCCGTGCCTGCGCACTGCAAGGTGCTAGTGCGAGTACTGGATGCTAATGACAACGCGCCAGAGATCAGCTTCAGCACCGTGAAGGAAGCGGTGAGTGAGGGCGCGGCGCCCGGCACTGTGGTGGCCCTTTTCAGCGTGACTGACCGCGACTCAGAGGAGAATGGGCAGGTGCAGTGCGAGCTACT---GGGAGACGTGCCTTTCCGCCTCAAGTCTTCCTTTAAGAATTACTACACCATCGTTACCGAAGCCCCCCTGGACCGAGAG--GCGGGG----GACTCCTACACCCTGACTGTAGTGGCTCGGGACCGGGGCGAGCCTGCGCTCTCCACCAGTAAGTCGATCCAGGTACAAGTGTCGGATGTGAACGAC chr4 + 94230402 27986051 27986050 27988594 27986051 27986050 27988594 2544 cccgctttccctgcccgcact-gcctctactgcctgcgc-----tgctttgcctgcctgcctgcccgcctC-TGATGCAGCCAACCTGACGTGCGCCGCGGCCAATAGGGTGCCGCCCCCGGGGGCGTTGCTGCCGGCTGATTGGTTGGCAGGAGCCGAGCGCTGCGCAAAAACAGCAAAGCCGAGCGCTCTCGGCTCAGAAACTGCCGGCAGAGATCAGAGGAGCGGAGCCGGGCTGGAGCCGGGACGGGAGGAGagcggcggcagcggcagcagcagcagcaAGCAGAGAGAGGGGGTTAGGCGCAAAAGCAGCAAGAGAGGAAAAAGGCA------AAACTGATCGGCACGTCCATAAA-ACGCAAAAACGCAGAGTGATGATGATGAACGTAATAATAGCAATAAAAGA-AGAAAATGAAAGACTGTTGATAGAAGAGAGAAAAATCTAAGATCTTTAAATAAAAAGAGGAAATCC---CAGAGAAAT-CAGGGAATGAAAGTTT-GGGTAGAGAAGCTGCTCTCTGCCGTTTTTGATATGAAACGTTTTTGCGGGTTTTAAtttttttttctttt-------------------------------------------cttttcttttttttttttttcttttTCATTTCGCGATTTTCTGCCTTTTTCTTGCCTCCGAAGAGGGCATGTCCACCGGCTCCGCCAGCAGCGTCTCCCCCTCCGGCTCCCACCAG---GAAGACAAACCGAGGACAATCCTGAAATACAAAATTTTCTTCCCTGGGATTtgctgctgctgctgccgccgctgttgctgccgcGGTGCAGTGCCAAGACTCTCGGAATAAATAAAAGCGGGCTACTGTGTGTCTGTAGATGCGGGCAGCTAATAGCTATTATTAGTTGGCCATTGATTTCGAAGATCACAGATGAAGT--GGGGACGCCTTTCTTCTTCATTTGGTCAGCGTGTGAAACAATAATACTCGTAACAAATAGGAGGGAGATGGGGGTGAAAAAAATCTTAACATGATTCAGAAGAAATAATACCTAGCGCACTCCCCCCTAAGCCGGAGCCCCCCTTCCTTCCCCCCCTCCCCGCTCCCTCTCTCGCCACACGCTCGCAGGCGCGGacacacacacacactcgcacacagagtcgcgcacacacatccacacacaggcgcacgcacTGTGCTGTGTGCTTTCGGAG-------------GAGGAGGTGGTGGAGGCTTTTGGAAAAGGAGGAAGAGGTGGC-----GTTGGGGAGGGGGGATCTCTTTCCCCTTTGGAGATGATCGTGCTATTCCTCTTTGCCTCGCTCTGGATGCTGGAGGGGGCCCTCGGCCAGCTCCATTACACGGTGCAGGAAGAACAGGAGCATGGCACGTTCGTGGGGAATATCGCCGAAGACCTGGGCTTGGACATTACAAAACTTTCGGCTCGCCGCTTCCAGACGGCGTCCAATTCCCGCAGCCCTTACCTGGAGCTCAACCTGGAGACCGGGGTGCTCTACGTGAACGAGAAGATCGACCGCGAGCAGATCTGCAAGCAGAGCCCCTCCTGCCTGCTGCACCTGGAGGTCTTCCTGGAGAACCCCCTCGAGCTGTTCCGGGTGGAGATCGAGGTGCTGGACATCAACGACAACCCACCCTCCTTCCCCGAGCCCGACCTCACCGTGGAGATCTCGGAGAGCGCCACGCCGGGCACCCGCTTCCCCCTGGAGAGCGCCTTCGACCCCGACGTGGGCACCAACTCTCTGCGCACCTACGAGATCACTCCCAACAGCTACTTCTCACTCGACGTGCAGACGCAGGGCGACGGCAACCGCTTCGCCGAACTGGTGCTGGACAAGCCGCTGGACCGCGAGCAGCAGGCGGTGCACCGCTACGTGCTGACCGCGGTGGACGGCGGA------------------------------------------------CAGCCC------CAGCAGCGCACCGGCACCGCCCTGCTCACCATCAGGGTGCTGGACTCCAACGACAACGTCCCCGCCTTCGAGCAGCCCGTCTACACCGTGTCGCTGCCAGAGAACTCGCCGCCGGGCACGCTGGTGCTGCAGCTCAACGCCAGCGACCCCGACGAGGGGCAGAACGGCGAGGTCATCTACTCCTTCAGCAGCCACATCTCGGCCCGCGCCCGGGAGCTCTTCGGCATCGCGCCGCGCACCGGGCGCCTGGAGGTGAGCGGCGAGCTGGACTACGAGGAGAGCAGCGTGTACCAGGTGTACGTGCAAGCGAAGGACCTGGGGCCAAACGCCGTGCCGGCGCACTGTAAGGTGCTGGTGCGGGTGCTGGACGCCAACGACAACGCGCCCGAGATCAGCTTCTCCACCGTGAAGGAGGCGGTGAGCGAGGCGGCGGCGCCGGGCACCGTGGTGGCCCTCTTCAGCGTCTCGGACCGCGACTCGGAGGAGAACGGGCAGGTGCAGTGCGAGCTGCTGCAGGGCGACGCGCCCTTCCGCCTCAAGAGCTCTTTCAAGAACTACTACACCATCGTCACCGAGGGGCCGCTGGACCGCGAGCAGCCGGGCGGCGACGCCTACACGCTGACGGTGGTGGCGCGGGACCGCGGCGAACCACCGCTCAGCACCAGCAAGTC-ATCCAGGTGCTGG--------GTGAGCGAC .:....:..x.-:.:.:....-:..:.x:.:..::.x..-----.x..x.x..xx..:...:.x.:...x.-...:.:-.:.x:::..:..xx.:x:x:.......x:xxx..x..:.x-.x...:.x....x.:..x:.............:.xxx.:...............:.x:.............xx:..............:..xx...:..x...xx.:...----....:...x..:--..:....::.--------------------:.x.x...x.:.:....:x:.x.x:.x.x:....x:..xx.:..:.....x:...------......x..:x:..::::.:.:.-.x....:x.xxx:x:.x.....x..:::.x.x..:x.x::.xx.:.....-.:.....:x..:xxx:x:..x...:..:.:...x:..----------------..::..:.x....---.:.......-x..:............-::.:x.x::...:.:...x...:-...::.::.::...:xx.x.:..x.:......x:::....x.x...-------------------------------------------.x.:..:....::..:.::....::..x.:.-----.:....x...::.-----.....------------...x.:xx:...x..---------...:.x.:.xx......:...---..................:..:.......:x:..x....:..::..........----------------------------------...:.........x..........-::.x..x.:...:...:.xx:...x:x.------------------......:..:.:..x..:----:.....:........:.x--..........x..x:.:.:x:.xx.::.:x:.x.:...x..--------------------.:x...::x..:x..x:::..::::...x....xx..:...:.:...x.::.------------::x...x.:..:-------------------------------------------------..x.:.:.:x:.x.x...---------------..x......x:x:..:------------------------...:.x:....:..x-------------.x..x.....x.....:xx....--------------.....-----.x:x.x.:.::.xx.::..:..:..:............:........x:.x.......:..........x....:..:.:.:.:xx......:..:........:.....:..:.....:........x.................:.....:.....::..........................x.x..:.......:.:....:..xx.x.x.......:.:..x..............x........x..............:..x........:..:........:..............:x.x.................:..............x..........:........................:..:........x.....:.....x.....x.....x..x.....:.....x..............:.....:.........:..........x........x.................::.....:x............:.................x..x...........x.....x..:........x.....:..:...........x.....:........x........:...................................x...------------------------------------------------.x....------.................x.....:.........x.:..............:.....:..x.....:.....x..:...........:.....x..:...........x..x..:.....x..x...x.x.............x......x........x........:......:.x....................:...x....x..x........:.....xx..x..........:..xx.x........:.........:.......:..:......xxx........:..............x...........x..x...........x........:........:.....:..:.....:..:..:...........x............xx............:........:....xx........x.....:...........:........xx.x...........:........:....................:..---...x....:...:............xx:..:..:.....:..............:.....:.xx..x........x...--..x...----...x.......x.....x..:.....x........x.....:..xx.....xx......:.....-........:.x:.--------....:.... 11M1I9M1D17M5D27M1D6M1I40M1I110M4I12M2I10M20I55M6D23M1D50M1D37M16I13M3D9M1D16M1D23M1I46M43D31M5I13M5I5M12I15M9I21M3D54M34I24M1I28M18I18M4I18M2D41M20I52M12I12M49I18M15I16M24I15M13D23M14I5M5D654M48D6M6D512M3I79M2I6M4I65M1D13M8D9M 1742/2267 76.8% 2544/94230402 0.0% 426/2267 18.8% 105163048 85051507 +31047 chr4 + 190214555 133150606 133150605 133152392 1787 TTGCGCGACTACGAGATCACCCCCAACAGCTACTTCTCCCTGGACGTGCAGACCCAGGGGGATGGCAACCGATTCGCTGAGCTGGTGCTGGAGAAGCCACTGGACCGAGAGCAGCAAGCGGTGCACCGCTACGTGCTGACCGCGGTGGACGGAGGAGGTGGGGGAGGAGTAGGAGAAGGAGGGGGAGGTGGCGGGGGAGCAGGCCTGCCCCCCCAGCAGCAGCGCACCGGCACGGCCCTACTCACCATCCGAGTGCTGGACTCCAATGACAATGTGCCCGCTTTCGACCAACCCGTCTACACTGTGTCCCTACCAGAGAACTCTCCCCCAGGCACTCTCGTGATCCAGCTCAACGCCACCGACCCGGACGAGGGCCAGAACGGTGAGGTCGTGTACTCCTTCAGCAGCCACATTTCGCCCCGGGCGCGGGAGCTTTTCGGACTCTCGCCGCGCACTGGCAGACTGGAGGTAAGCGGCGAGTTGGACTATGAAGAGAGCCCAGTGTACCAAGTGTACGTGCAAGCCAAGGACCTGGGCCCCAACGCCGTGCCTGCGCACTGCAAGGTGCTAGTGCGAGTACTGGATGCTAATGACAACGCGCCAGAGATCAGCTTCAGCACCGTGAA---------GGAAGCGGTGAGTGAGGGCGCGGCGCCCGGCACTGTGGTGGCCCTTTTCAGCGTGACTGACCGCGACTCAGAGGAGAATGGGCAGGTGCAGTGCGAGCTACTGGGAGACGTGCCTTTCCGCCTCAAGTCTTCCTTTAAGAATTACTACACCATCGTTACCGAAGCCCCCCTGGACCGAGAGGCGGGGGACTCCTACACCCTGACTGTAGTGGCTCGGGACCGGGGCGAGCCTGCGCTCTCCACCAGTAAGTCGATCCAGGTACAAGTGTCGGATGTGAACGACAACGCGCCGCGTTTCAGCCAGCCGGTCTACGACGTGTATGTGACTGAAAACAACGTGCCTGGCGCCTACATCTACGCGGTGAGCGCCACCGACCGGGATGAGGGCGCCAACGCCCAGCTTGCCTACTCTATCCTCGAGTGCCAGATCCAGGGCATGAGCGTCTTCACCTACGTTTCTATCAACTCTGAGAACGGCTACTTGTACGCCCTGCGCTCCTTCGACTATGAGCAGCTGAAGGACTTCAGTTTTCAGGTGGAAGCCCGGGACGCTGGCAGCCCCCAGGCGCTGGCTGGTAACGCCACTGTCAACATCCTCATAGTGGATCAAAATGACAACGCCCCTGCCATCGTGGCGCCTCTACCAGGGCGCAACGGGACTCCAGCGCGTGAGGTGC---TGCCCCGCTCGGCGGAGCCGGGTTACCTGCTCACCCGCGTGGCC---GCCGTGGACGCGGACGACGGCGAGAACGCCCGGCTCACTTACAGCATCGTGCGTGGCAACGAAATGAACCTCTTTCGCATGGACTGGCGCACCGGGGAGCTGCGCACAGCACGCCGAGTCCCGGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTGATCGAGGTGCGCGACCATGGGCAGCCGCCCCTTTCCTCCACCGCCACCCTGGTGGTTCAGCTGGTGGATGGCGCCGTGGAGCCCCAGGGCGGGGGCGGGAGCGGAGGCGGAGGGTCAGGAGAGCACCAGCGCCCCAGTCGCTCTGGCGGCGGGGAAACCTCGCTAGACCTCACCCTCATCCTCATCATCGCGTTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCATGATCGTGCTGGCCGTGCGTTGCCAAAAAGAGAAGAAG---CTCAACATCTATACTTG chr4 + 94230402 5230866 5230865 5232523 5230866 5230865 5232523 1658 TCGCAGAGCTATCAGATCACCCCCAACGACCTCTTTGGGCTGGACACCAAGACGCGGGGAGATGGCTCTCGCTTTGCTGAGCTGGTGGTAGAGAAGAGCCTGGACCGTGAGACCCAGTCCCACTACAGTTATGTGATCACGGCGCTGGATGGCGGAGA-------------------------------------------------CCCGCCCAACTTTGGCACAGTGGAGC--------TTAGCATCCGCGTCATCGACTCCAATGACAACAACCCACTCTTCGAGGAGCCGGCCTACACTGTCAGCGTGCCTGAAAATGCCCCACCGGGCACACCAGTCATCCGCCTCAACGCCTCTGACCCGGATGAGGGCACCAATGGGCAGGTGCTCTACTCTTTCCACAGCTATGTCTCTGACCGGGCTCGAGAGCTCTTCCAGATCGACCCTCAGAGTGGCCTCATCACAGTCAGTGGTGCCATCGACTATGAGGAGGGACATGTATATGAGCTGGATGTGCAGGCCAAGGACTTGGGACCTAACTCCATCCCTGCCCACTGCAAAGTGACCATCAGCGTGCAGGACGCCAACGACAACCCTCCCCTCATCAACCTTCTCTCCGTCAACAGTGAGCTGGTGGAGGTGAGCGAGAACGCCCCTCCGGGGTACGTCATTGCCCTGGTGCGGGTCTCGGACCGTGACTCGGGGGCCAATGGACGTGTGCAGTGCAAGCTGCTGGGCAACGTGCCCTTCCGGCTGCAGGAGTA---TGAGAGCTTCTCCACCATCCTGGTGGATGGGCGGCTGGACCGTGAGCAAAGGGACCAGTACAACCTCACCATCCAGGCCAAGGACAACGGTGTCCCCTCCTTGCAAGCTACCAAGTCCTTCACTGTCAAGATCACCGATGAGAATGACAACCACCCTCACTTTTCCAAGCCCTACTACCAGGTCATCGTGCAGGAGAACAACACCCCGGGGGCCTACCTCCTCTCAGTCTCAGCAAGGGACCCTGACCTGGGCCTCAATGGCAGCGTCTCCTACCAGATTGTGCCCTCCCAAGTCAGGGACATGCCTGTCTTCACTTATGTCTCCATCAACCCCAACTCTGGAGATATCTATGCCTTGAGGTCCTTCAATCATGAACAGACCAAGGCCTTTGAGTTCAAAGTCTTGGCGAAAGATGGGGGCAATCCCT---CTCTGCAGAGCAATGCCACTGTCAGGGTGATTGTCCTGGATGTCAACGACAACACGCCGGTGATCACAGCCCC---ACCGTTGGTCAATGGGAC-----CGCG-GAGGTGTACATCCCCCGGAACGCAGGGGTTGGCTACTTGGTGAC---AGTGGTCAAGGCAGATGACTATGACGAGGGTGAAAATGGCAGGCTTTCCTATGAAATGGTGGAAGGAGACAGA---GGATTTTTTGAGATAGACCAGGTCAATGGAGAGATAAGGACCAC---CAGAGCCTTTGGGGAGAATG---CCAAGACAGCCTACGAGCTGATCGTGGTGGCTCACGACCATGGAAAAACATCCCTGTCGGCCTCTGCCTTGATTTTGATATACCTG-----------------TCCCCAGCCC-----------------TGGATGCCCAGGAG-----------TCCATAGGATCTG------------------TTAACCTCTCCCTGATTTTCATTATTGCCCTGGGGTCTATTGCGGCCATTCTTTTTGTCACCATGATCTTCGTGGCAGTAAAGTGCAAAAGGGATAACAAGGAAATCAGGACCTATAACTG .:..:x::...:x..............::.:x...:xxx......::xx....x.:...:......xx:..x..:............x.:......xxx........x...xxx..:x.xxxx:..x.:..:...x.x..x...x....:..x....:-------------------------------------------------...x....:.xx::..:..x:..x:.--------.:.x......x..xx.x..............::xx..xx::.....xx.:..x.:.........xxx.x.:..x..:..:x.:..x..:.....x.:x..x....:x.........x.:........:......xxx..:..xx....xx.x.....:...x:....:.::.:..xxx......x..:.....:...x::x..xxx..x.:x.x....xxxx.x:x:..x..:..:.xxx.x........:...:.x.xx..:..:x.:x..x.:.....:.........:....x..:...x..:.x.....x........:...x:x:.xx.x..:.x...:..:..:......x.x..xxxx....:.:.:xx.x....x..---------..x:.x......:...::...xx.x..x..xxx:..x:.x.....xx.xx.x..xx.x.....:.....:.:..xx.....:.:x.........:....:.....x:.......:.....x..xx..xxx.x---.:...::.x..x.......x.x::x..x.xx.xx........x...xx::.....:xx....x...x..::.xxx...:x:....x:x..:.xx..:x.x:.x:xx:.:.x:.....xx..xxx..xx.::.xx.x....x...:......xxx..x.::..:xx.x....xxx....x.x..xxx:...xxx..:......::x..x..x......x..:x.x.:..xxxx..x.xx....xx..:xx....x:...:.x.x:xx.:x.....:xx..:x.xxxx.x...::..x:..:....xx:........:..:..:..:......:.::.xxx:..xx.:x.x..:...:..x.x......:.::....:...x:x....x...:::x..:x.:..xxx:..xx::..:.xx....::...:---.x...xxx:.:..:..........:x:.xx.::.xx.....xxx..:......:.x..x.:x...:::..x..---...:xx.xx...:.....-----....-......:---.x.....xxxx..:.:.x:x..:...:..x.x..---x....:.---..x.xx...xxx.....x..:..:..:.x.x....:x.:..:::x..x...x:x..x:..::.---::x:.:...x:x..:...::.xx..x:..:...x.:x.x..x:.---.x...:.::x.xx:..x::.---..x..xx:x.:..:......:.x:.x.x..:x.:.........:x.:x.::....x..xx..x.:...x:xx.xx..:.x:.x...-----------------x......xx.-----------------:...x.x:......-----------:...xxx.x....------------------.x:.....x....x..::....:..:..x:....x..x:.xx.xx:...::.::.xx.x:........x.xx....x..:x:x...x...::..x..x...---x...:x.:.....x:.. 158M49D26M8D385M9I132M3D428M3D73M3D18M5D4M1D7M3I34M3D7M3I63M3D44M3D20M3D86M17D10M17D14M11D13M18D101M3I17M 1005/1640 61.3% 1658/94230402 0.0% 165/1640 10.1% 127919740 62294815 +6337 chr4 + 190214555 133150852 133150851 133151318 467 ATCCGAGTGCTGGACTCCAATGACAATGTGCCCGCTTTCGACCAACCCGTCTACACTGTGTCCCTACCAGAGAACTCTCCCCCAGGCACTCTCGTGATCCAGCTCAACGCCACCGACCCGGACGAGGGC------------CAGAACGGTGAGGTCGTGTACTCCTTCAGCAGCCACATTTCGCCCCGGGCGCGGGAGCTTTTCG--GACTCTCGCCGCGCACTGGCAGACTGGAGGTAAGCGGCGAGTTGGACTATGAAGAGAGCCCAGTGTACCAAGTGTACGTGCAAGCCAAGGACCTGG----------GCCCCAACGCCGTGCCTG---CGCACTGCAAGGTGCTAGTGCGAGTACTGGATGCTAATGACAACG----CGCCAGAGATCAGCT--TCAGCACCGTGAAGGAAGCGGTGAGTGAGGGCGCGGCGCCCGGCACTGTGGTGGCCCTTTTCAGCGTGACTGACCGCGACTCAGAGGAGAATGGGCAGGT chr4 + 94230402 27987602 27987601 27988074 27987602 27987601 27988074 473 ATCGAGGTGCTGGACATCAACGACAACCCACCCTCCTTCCCCGAGCCCGACCTCACCGTGGAGATCTCGGAGAGCGCCACGCCGGGCACCCGCTTCCCCCTGGAGAGCGCCTTCGACCCCGACGTGGGCACCAACTCTCTGCGCACCTACGAGATC----ACTCC--CAACAGCTACTTCTCACTCGACGTGCAGACGCAGGGCGACGGCAACCGCTTCGC-----CGAACTGGTGCTGGACAAGCCGCTGGACCGCGAGCAGCAGGCGGTGCACCGC---TACGTGCTGACCGCGG---TGGACGGCGGACAGCCCCAGCAGCGCACCGGCACCGCCCTGCTCACCATCA----GGGTGCTGGACTCCAACGACAACGTCCCCGCCTTCGAGCAGCCCGTCTACACCGTG------TCGCTGCCAGAGAACTCGCCGCCGGGCACGCTGGTGCTGCAGCTCAACGCCAGCGACCCCGACGAGGGGCAGAACGGCGAGGT ...x::.........x:...:.....:x::...x.:...xx.x.:....x.:x...:...xxxx.x:.:....:.x.:x.x..:.....:.x.x.xx:..x.xxx.:....x:......x....x....------------.:x.x.x::...:..----.....--..:....:..x.:..:.:.x:x.:..:.:x..xxxx..--.:.xx:...:x...-----.::.....x.x.:::.::xxx.:.....:::..:x..x:xx.:...:...:x---.......x::..:x..---...----------......:.:x..::..x.---...x....xx:x::::.----.:..:.....:x.:..:.......----....xxx..x....:--..x:.......------x..x..xxx...::.x..x....x.....xx.....x:x.xx:...:..:x.x:....x....xx:.:.x....:..xx.... 129M12I15M4D5M2D38M2I14M5D52M3D16M3D3M10I18M3I17M4D24M4I15M2I11M6D83M 271/440 61.6% 473/94230402 0.0% 60/440 13.6% 105163250 85051305 +4276 chr4 + 190214555 133151400 133151399 133151745 346 CCTGGACCGAGAGGCGGGGGACTCCTACACCCTGACTGTAGTGGCTCGGGACCGGGGCGAGCCTGCGCTCTCCACCAGTA-AGTCGATCCAGGTACAAGTGTCG--GATGTGAACGACAACGCGCCGCGTTTCAGCCAGCCGGTCTACGACGTGTATGTGACTGAAAACAACGTGCCTGGCGCCTACATCTACGCGGTGAGCGCCACCGACCGGGATGAGGGCGCCAACGCCCAGCTTGCCTACTCTATCCTCGA----GTGCCAGATCCAGGGCATGAGCGTCTTCACCTACGTTTCTATCAACTCTGAGAACGGCTACTTGTACGCCCTGCGCT-CCTTCGACTATGAGCAG chr4 + 94230402 5230964 5230963 5231303 5230964 5230963 5231303 340 CCTGGACCGTGAGACCCAGTCCCACTACAGTTATGTGATCACGGCGCTGGATGGCGGAGACCC---GCCCAACTTTGGCACAGTGGAGCTTAGCATCCGCGTCATCGACTCCAATGACAACAACCCACTCTTCGAGGAGCCGGCCTACACTGTCAGCGTGCCTGAAAATGCCCCACCGGGCACACCAGTCATCCGCCTCAACGCCTCTGACCCGGATGAGGGCACCAATGGGCAGGTGCTCTACTCTTTCCACAGCTATGTCTCTGACCGGGCTCGAGAGCTCTTCCA----------GATCGACCCTCAGAGTGGCCTCAT-CACAGTCAGTGGTGCCATCGACTATGAGGAG .........x...:.xx:.xx.:x.....x::xx::x:.x::...x.x...:x.x..x..x..---..:.xx.x:::.:.-...x..x.:x:.:.:xx.:...:--..:x:x..:......:xx..:.x:...::xx......:....:x:..xx::...x.......::x.x::..x...:.x:xx:..xx.xxxx.x.:....x.:....x..........:....:.xx...x.xx:.......x...x.::----..x:.x..:.x:.xx.:x....x::.:..----------x...:..:..x...::...:x.x.-:..:x:.x.:.x.-..x...........x.. 63M3D14M1I23M2I149M4I29M10D24M1D13M1I17M 193/332 58.1% 340/94230402 0.0% 22/332 6.6% 127920436 62294119 +53017 chr4 + 190214555 133151791 133151790 133152785 995 CCCCAGGCGCTGGCTGGTAACGCCACTGTCAACATCCTCATAGTGGATCAAAATGACAACGCCCCTGCCATCGTGGCGCCTCTACCAGGGCGCAACGGGACTCCAGCGCGTGAGGTGCTGCCCCGCTCGGCGGAGCCGGGTTACCTGCTCACCCGCGTGGCCGCCGTGGACGCGGACGACGGCGAGAACGCCCGGCTCACTTACAGCATCGTGCGTGGCAACGAAATGAACCTCTTTCGCATGGACTGGCGCACCGGGGAGCTGCGCACAGCACGCCGAGTCCCGGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTGATCGAGGTGCGCGACCATGGGCAGCCGCCCCTTTCCTCCACCGCCAC---CCTGGTGGTTCAGCTGGTGGATGGCGCCGTGGAGCCCCAGGGCGGGGGCGGGAGCGGAG--------------------GCGGAGGGTCA----------GGAGAGCACCAGCGCCCCAGTCGCTCTGGCGGCGGGGAAACCTCGCTAGACCTCACCCTCATCCTCATCATCGCGTTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCATGATCGTGCTGGCCGTGCGTTGCCAAAAAGAGAAGAAGCTCAACATCTATACTTGTCTGGCCAGCGATTGCTGCCTCTGCTGCTGCTGCTGCGGTGGCGGAGGTTCGACCTGCTGTGGCCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAAGTCAGACATCATGCTGGTGCAGAGCTCCAATGTACCCAGTAACCCGGCCCAGGTGCCGATAGAGGAGTCCGGGGGCTTTGGCTCCCACCACCACAACCAGAATTACTGCTATCAGGTATGCCTGACCCCTGAGTCCGCCAAGACCGACCTGATGTTTCTTAAGCCCTGCAGCCCTTCGCGGAGTACGGACACTGAGCACAACCCCTGCGGGGCCATCGTCACCGGTTACACCGACCAGCAGCCTGATATCATCTCCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGAAGCG chr4 + 94230402 27989481 27989480 27990402 27989481 27989480 27990402 922 CCGCAGCCGCTGGCCGGCAACGCCACCGTCAATATCATCGTCGTGGACCAGAATGACAACGCTCCCGCCATCGTCAGCCCGCTGCCCGGCCGCAACGGCACCCCGGCGCGGGAGGTGCTGCCGCGCGGCGCCGAGCCGGGCTACCTGGTCAGCCGCGTGGCGGCGGTGGACGCCGACGACGGCGACAACGCCCGCCTCACCTACAGCATCGTGCGAGGCAACGAGGCCAGCCTCTTCCGCATGGACTGGCGCACGGGCGAGCTGCGCACGGCGCGCAGGGTGCCGGCCAAGCGCGACCCGCAGCGGCCCTACGACCTGGTGGTCGAGGTGCGCGACCACGGGCAGCCGCCGCTCTCCTCCACCGCCGCCATCCAggtggt---gctggtggacggcgcggccgagcggcccggcggcggcggcggcggagctctgggtgcgggggtgggcgcggggggcggcggcggcggcggAGAGCATCGG---CCCAGCCGCTC---CGGGGGGGACACCTCGCTCGACCTCACCCTCATCCTCATCATCGCCCTGGGCTCCGTCTCGTTCATCTTCTTGCTGGCCATGATCGTGCTGGCCGTGCGCTGCCAGAAGGAGAAGAAGCTCAACATCTACACCTGTCTGGCCAAAAAGGGCTGCCTGGgctgctgctgctgctgc------------ccctgctgcAGCNNNNNNNNNNG-------------------------------------------------------------------------------------GAGGAGTCGGGCAGCTTCGGCTCCCACCACCACAACCAGAACTACTGCTACCAGGTCTGCCTCACGCCCGAGTCCGCCAAGACCGACCTGATGTTCCTCAAGCCCTGCAGCCCCTCCCGCAGCACCGACGCAGAGCACAACCCTTGTGGGGCCATCGTGACCGGCTACGCCGACCAGCAGCCCGACATCATCTCCAACGGCAGCATCCTGTCCAGCGAGGTAAggccgggccg ..x...x.......:..:........:.....:...x..:.x.....:..:...........:..:........x:xx..x..:..x..x........x..:..:.....x...........x...xxx..x........:......x...x.........x..x........x...........x........x.....:..............x........:::x.:......:.................x..x...........:..:...x.:..x.................x........:..:..x......:................:...........x..:............:.---..x......---.........:.....x.:x....xx.xx.....x.....x:......--------------------....:...:x:----------........:.:.---.....:.....---...x.....x........x..........................x:.......x..x..x.........:............................:.....:..:....................:..:..........:x:.xx.......xx..............x.:------------x.......::..XXXXXXXXXX.-------------------------------------------------------------------------------------........x..x:....:.......................:........:.....x.....x..x..:..........................:..:..............:..x..x..:..x...:.x...........:..:...........x.....:...:.............:..:..............x.....::......:...........:.::x.. 368M3I9M3D47M20I11M10I12M3D11M3D175M12D23M85D233M 738/879 84.0% 922/94230402 0.0% 139/889 15.6% 105162310 85052245 +17585 chr4 + 190214555 133154268 133154267 133155041 774 AGCATTCAAATGCTCTTGATTTATTTATTTTTTTCCTAGACTAAACACCAGCGAGCAGAGCTCAGCTATCTAGTTGACAGACCTCGCCGAGTTAACAGGTATGGACTCTTT-------TTTTC-----------CCTAGCA---------GTAATGGACAA-----TTTACAACCTA-GTAAAA--GTAG----GAAGTAGGTATATTATTCTAAATTAAAATTGAAATGTATAAAATATTTTCAATTAAGGCAGGACATAAATATGAACTAT-----------ATTGTGTTTCCTAGACA-ATACATTAAAAATTATACATTATATTTCATTTATATACAACGCTTAAACTATATTTGAATATTTTGTCAATTTACACTCCTACACAGCTT--CCGATAGTCTT--CCTCACTGTTCCAAATGTATATTTATATCTATTTTATGAAAATGATATAAACATGTATTTAGCTCCAATTATA-------------GAGT---AATGCCTAAACTTTACATGACTTAAGTGCTCAAAAT-GACTGTTAATCGATCATTTTTAAATAGTTAAGCTTAGGCTATA------AAAACTA----GCTTTATGCAGAAACAAAGCCAACTAAGAGGTCTGTGAGTCTGCAGCACCATCTGTGACCATGTGGTGGCAGAAGAATGTTTTCTGTGTTTCTTCACCTTTTTTATTCTAATATTCACATTTTTGTACTTCTAGTTCTGCATTCCAGGAAGCCGACATAGTAAGCTCTAAGGACAGTGGTCATGGAGACAGTGAACAGGGAGATAGTGATCATGATGCCACCAACCGTGCCCAGTCAGCTGGTAAGTGTGATCAAAGGG chr4 + 94230402 27991677 27991676 27992472 27991677 27991676 27992472 796 AGTGTTCAAATATTTCTCAAT-ATTTTTTTTTTTCCTAGACGAAACATCAGCGTGCTGAGCTCAGTTATCTAGTTGACAGACCCCGACGGGTAAACAGGTATGAGCTCCTTAGTCATGTTTTCATAATGCGTGCTTTGGCAAGTGTGAATGTGATGCAGAAATGTGTTTACTGCAGATGTAAAACAGTAGCAAAGCAGCGGGAAAATGGATGTATGTAGACATATGAA---ATAAAACACTGTCAAGTAA--------ATGAGTACGAATTACTGCTTTTTTGAATTG-GTTTCAAAGTCATCTGAAAAGAGAACAAAACCTCATGTTTTATTAGTCTAAAACATCC--------TTTAAATACTT-----ATGAATCCTTCTGTAGAGTCTTGCTTATAACATTGGCTTCTCTAAGTCAAATTTCTGCC---ATCCAGCTTACGTCAATGATTCCGAACTATTTATA---CCAATTACGTGAAAAGCAGACGGAGTGGCAATGCCTA-------------CTGACCGTTTGGGCTAGGCTGCCAAT-------GTTTGAAAAGGCAAGTTTTATTCATGGTGGACAGAGCTGCGCTGCTCTGCAGAGGTACAAGGC--------AGGGGTGAGCGACTGCAGCACCTTGTTTGGCCATGTGATGGCAGAAGAATGTTTTATGAGTTCCTCTTTAATGTTTATTCTAATGTAAAGATGTTTCTGTGTCTAGTTCTGCATTCCAGGAAGCAGACATAGTAAGCTCTAAGGACAGTGGTCATGGAGACAGTGAGCAAGGAGACAGTGATCATGATGCCACTAATCGAGGTCAATCCTCTGGTAAGTCTGATAAGAAAG ..::.......::.::.x.x.-....x..............x.....:.....x..x........:.................:..x..:..x..........::...:..-------.....-----------::.:...---------..:...x.x..-----.....x:.xx.-......--....----.x..::..x.x..x:x.x..x:.x:.x..xx:..---......:.:.x....x...--------..:.:..:...:..:-----------....-.....xx..x..-x.:x.xx:.:..:x.x..x.:..:...:...x:.x..x...::::--------...:....:..-----..xx.:x..:..::.x..::.--.:x...::x..--.:..x..:xx:.....x.x.:::---...:.x:...:.xx......x:x:.xx.:.x.x..---.......::-------------....---........-------------:.:.x:.:.::::x.-.:...::...-------x...:..x..x:...:..x:x::..:------.:.:..:----...:.:::x..:x....:..--------...xx..x.x.x..........x.x.x..:.......:.................x..x...:..::x:xx.x...........:.xx.x..x...x.::x.......................x.........................................:..:.....:.................:..:..x.x:..:..xx.........x....x.:.::. 21M1D89M7I5M11I7M9I11M5I11M1I6M2I4M4I34M3D19M8D15M11I4M1D12M1I45M8D11M5D21M2I11M2I23M3D35M3D9M13I4M3I8M13D15M1I10M7D26M6I7M4I20M8D231M 505/714 70.7% 796/94230402 0.0% 142/714 19.9% 105162591 85051964 +24658 chr4 + 190214555 133156254 133156253 133156931 678 TGCTGTGTCTGTGGCTGCCTTAGCCTTGGGAAACCCAGG---CAGGAGGAAGGGAAAAAAGGCTGCTCAAGGGTCTCTTTATATTGCTGTGAGTCATTAATATGCAGGCCTAATGAGACTTGAGAACTGCCAAGAATCCCCGGAGGTCTCTGCCCCTTGCGGGCCTTCACGCTAAGTGAACAGAGCATCTATTTAGTGTCTGGGAACCTGACAACAAACCAGATCTTGCCAGAAGTTTATATGTGCGTACAAAGTCCCTTTCATTTTTGCCCTATATATGGCATATGATTTATTGTTATCTTTAAAAACTGTACATTTAGCATTGCTCATTCCTGTTCTTTTTCAGAGTTTCTAATTTAACTGTCAACCTTTTAAAACTTTTAAAACAAAATGTTTAATGTTTTAAAGAGTATCTGTTGCATGTTTCTTTGGATGCATTTTACTCCTTTCCCACCCCACACGCCCCGC-TTTGTTTTTC-------------------CTGTAGCACTTCAATCTCAATGAACATTTCAATTAGTTTAGTCCCTCAGACATAATGACCCATAATAACCTAACTGAAGAAAGAGAAATGAATAAACATCTGCAAAAGAG-CCAAATTTGGAAGATAGATGAGAACATATTCTTATCAGTGCATCTT-CCCAGTAGCTACTTTATTTCACAGTCACTCAGTGTTACCATTTCTGT chr4 + 94230402 27993611 27993610 27994241 27993611 27993610 27994241 631 TGCTATGGTCACTGTTCCCTTAATGATGGGAAACCCAAAAACCAGGGGGAAGAGGA----GGCTGGTACAGGGCCCCTTTATATTGCTGCAAGTCATTAATATGCAGACCTAATGAGACT-GAGAAGAGCCAAGAGTCTCCGGAGCTCCCTGCTTCTTGCAGGGCTTCATGCTAAATGAACAGAGTGCCTATTTTGTGTCTGGGAACCTGACAACAAACCATGTCTTGCCAGAAGTTTACATCTGAACACAGAGCCTCTTTCATTTTTGGGCTATATATGGCGTATGATTTATTGTTGTCTTAAAAAGCCATGCATTTAGACTCCCCCA--CCCATTCTTTTGCACTCTTTCTGATGCAG----CAACCCGCTACTGC---------------------GTGATAAAAA--------------------------------ACTCCCTCCCCTCCTTGCCCTCCCTGCATTTGTTTTTTTTCTCTTTTACGCATTTTACTGCAGCAGTC--ATCTCAGTGAAAATTTCAATCAGTTTAGTCCCTCA-ACATAATGAACCATAATAACCAAACAG----GAGAGAAAAGTACAAACATCTGCAGAAGGGACTGGATTTGACTGAT-GGTGGGAATATAATCATACAGTTGCACATCAACTGAAAGCTATTTTCTTTTAGTTGCATCCAGTACTGTTATTGTTGT ....:..x::::x.:.x.....::xx...........::---....:.....:.:.----.....x.xx....:.:.............::................:............-.....xx.......:..:......x..:....::.....:..x.....:.....:.........:::......x..........................x:................:..x..x::...:..:.:............xx...........:..............:....x....:.::.:.......xx.:x.:..--..::.......x..xxx.....:..x:.:----.....:x:..xx:.---------------------..xx....:.--------------------------------.....:.:...x..:::.x.x...:..-.........:-------------------...:....x.:--......:....x........:..............-.........x...........x...x.----:.......x.x.:...........:...:.-.:::.....:xx...-.:..:...:...x..x..:x:x....:x.:-x.:::x.....:...x...:.xxxx..::....::.:::...x:... 39M3I14M4D60M1D208M2D29M4D14M21D10M32D27M1I10M19I11M2D35M1D27M4D30M1I15M1D30M1I47M 457/606 75.4% 631/94230402 0.0% 97/606 16.0% 105162643 85051912 +38470 chr4 + 190214555 133161088 133161087 133163444 2357 TGTCTAGTGAAACA-TTTACATGTTTTACATGCTGTTCTCAGTCAGATTCCTTAATCCCAGCTTCAGCTGACGTTTCCGTTCCTCAACAGTTCACTGATCAGTAATTTATTTCCAGACTTAAACAGGAAAATTATCAGTGAAATATTATAATCAAAGTCAGACTTAGCATTCTACATAGTTTAATATAAAATTTTAAAAAAGTCATTACGCAGTGAGATTAATATATGATAAGAAGCTTGGTGTTACTTTTTAAAATTTATGTAATTTGCTATTCTTAACTCCAAAATACTAGAGTTAAGTATTAGATAATCTAGATAATCTAGATAGTGTTAGACAAACCAGAGTGTTCATAATT-TTGAAAAATTATTTTATTTTATATATGCAGATAACATATACACAAATAT----------ATATAAATCAATATGTAACAGAATACTATCAGGAATTTAAAAACTAAAA--CTTGCTCAAGAGCTCAAATCACTTGTGATATTAATAGAAGTAACAATCAAGTATGTTCATTAAATAAATATTCTTTTGATTTAAAAAATGTTTTTCCAGACTGTGCATGGATTCGAGTTTCTTTTCTACAGACTAATAATATACTTTTGTTTTTCAAATTGATCCTCTTTTAAAATTTTTTTATTATTTTTTCTTTTTTTAAAATATTATTTAAAAAATAAAGTGGCCTACTAGGCACTGTCATTCCACACCCAGCTCCATGCCAGTGAGCTGGGGAGCTTCTTAGCCATTTAAAGTTTGAGAATAGGTTGAGATT-GCTTTGGC-----CCTGTTTTAAAATATCTGATAGATATGTTACTATGTTTAGAAAA---ACATTAAAATGCTATTTTTGTTTATGTGTTTTTCTGTGTAGTGCTATATA------TATCAGCATTAATATCAAATAGTATTCTGTAGT--GCTTGAAAATTCTTATGCTTTGCTT-----AAGAAACTGAATG----ACCTTTCTTGATCATAATCAGATAATATT--TGTAATCTTGTCAATCTAAGGAAG---ACAATGAAA---TTTGAACTTGTCCTTTGAAATCTT---GGTATTATAGGATTAGTAAGCAAACAACTCTTTGTTGACTAGGACAAGTGTGTTCCAATATAGAGCAAGTAATAACGTATTTGTCAATAGTATCTGCAGTTGATTTACACTGCATT-TGGTTACCTTGGTTTCATTAATTACAGTC------ATTTGTTCTGGA---------TTTGTCTAAGGTGGTAA-ATAATAAGTGGTTTT----TAGTAATATGGACTACCAGAGTGTCATTGAGGAATACCTTTAGGAAGTCATTTC-------------CTAGA----AACCTCGGAAAATATGCTTTTAGCTGCTAATGAAATTGTGTTTTATTCTTGTTT-----TTTACTGATT-TTCCTCTGTGT-----ATGCCACATTTCTGTTGAATTTCACTTTCTGCTT-CATATTCAAATTTCATAATCTAAATATCATTTTTGGTGCTTGGCATATTTCTTATGT----------------------------TATTTGTTTTTAAGGAAAAAAGTCAAATATTTATCATTGTTAGGGATCATGGATTTTAAAGCTTTTACACCTTGTTGTTTTATCTGTTATGAACT-------------------TCACAAGAGATTTTTTAAAAGATGTCTACCATTTTTATTCACCATTTCCCAGTTATTTAAAT-TGT----TTAGAGCCAATATTT-TGCCCAATACCCTAAGTAGTTTAGAAACATTTATCTCAGAGGCCTCTTTGCCAGAAGAGTCTTATCTTTTACATTTGCAGATCATTTTCCCTTTTTAAAGTGATGAACAAAAATGAGACAAAATAATATTTGGTTCCTGTCAGGATAAGCCAGGAAAAATTTGTTAAGACAACTTCACTTGTCACCCTTTATGCTACCTGTAATCTTACACTGCTAAGTAACTGGTCATGTTGGTGAAGACTACATCCGTAGTTTCTGTTTTC----TGCTTACAGGTATGGATCTCTTCTCCAATTGCACTGAGGAATGTAAAGCTCTGGGCCACTCAGATCGGTGCTGGATGCCTTCTTTTGTCCCTTCTGATGGACGCCAGGCTGCTGATTATCGCAGCAATCTGCATGTTCCTGGCATGGACTCTGTTCCAGACACTGAGGTGTTTGAAACTCCAGAAGCCCAGCCTGGGGCAGAGCGGTCCTTTTCCACCTTTGGCAAAGAGAAGGCCCTTCACAGCACTCTGGAGAGGAAGGAGCTGGATGGACTGCTGACTAATACGCGAGCGCCTTACAAACCACCATATTTGAGTAAGTATTACACAAAGGGCTCTGTTAAAGTGTTCCCTTTGAGGAGATAAAGTTCAA--CATTCCACTCTTTTTGGTAAAAATGGAGTTCAGGTTTTTTTAAGAAATAAAGATAAAAGTGAC------TGGATGCTGGCAGCACTTTAG--GGCAATATTC----TTTATTTAAAA chr4 + 94230402 27999310 27999309 28001557 27999310 27999309 28001557 2248 TGTAGAACGATACAGTTTCTACACCTTGCATAATGATCTTCATCTGATTGTTTAATCATACCTGCAGTTCAAGTTTACATTCTTCAGCAGTTCACTGATCAGTAATTTATTTTCAGACTTCTGTGTGCCAATTATCAATGCAAGGTTCTAATCAAAACAGGACCTGACATTGTATATTACTTAATTTAAAATT---AATAAGTCG--ATGCAGTGAGATTAATCTGAGGTAAAAAGCTTTTTTCCCCCTTCT-------------TTCTTTTTTCTTTAGTCTG---TATAGGAGACAGATTTTATTT--CTTAAGTGCT--------TGTTGGTAGCTCAAAAGGGGTCTTGCTTGCTGAAGAGTTTGTTTCCTTTA-GTGTG-AGATAACA----CAATAATATTATTAATAGAAAACAAATCAACAGTT--TAAAATAGTGATAGCATTCTTAATACTCTAATCCTCACATAGGAGATCAAACTAATCAAGTTCTTTGTGGT------------GTAGGCTGGTGAACGAGCTAC-------AGTGCACGAATCTTATTAAAGCTT---------TTCTATTTTTTTTTCTA-----------------TTTCTCCTGCAAGTTGAATGTTT------GTTTGtttgttgtgtttttttttgtt------ttgttt-------------------------tTGTAATTCTAA----------------------TGAAATGCTT----GTAAATGTAACTCTTATAACAGATTTAGTTCAGTCTTGACATACACCCGTTTTAAGACAC---------ATCTTTCTAAGTTCAAGAAGGAGACATT---------TCTTCACTGTTTTGCTTTTCTGTGTGATGTTGAACAATGACTTGGAGACCttaatatt------tattttaaaatatGCCTATGATTTCCTACACTATTCCTCTCAAAACAAGTAGAATCCAACAGCTTAGTGAATCACTGTCAGGAAATATTCTTTTGGACTGTTCATCTTAAGGTAGTCAACAATGGAAGCATTTG--CTTGTCATATGAAATTTTAATGGTATTAAAGCATTTATAAGCAAACAGTTTTATGTTCGCAGGGATAGGTGTTTGCTGATATAAGGGAAGCACTAACAATTCTGTCAGTAGTATCCATGGCTGTGTTGCACTGCACTACAGCTACCTTCAGAGTGCTAATTAAGGTACTGCTAATTTAACATAGGATTCCATCCCTTTACTTGGATGACAAGATAGTAAGAACTGTTGCTGTAGCAGTGAAAACT--CATAGTG--ATTGA--------TTTAGTAAGCCATCTTGATCACTTATAGGCTGGATTCCAACTCTGTAGGATCTGCTCTTAG-------TAACAATAGGCTCTATCTGTATGTATATATTTACAGATAATTAATTTATAAGACTAATACTTCATTTTCAT--AATTGAGATCTGTGATTACTCAATCAGGTCATATAATTT---------CTTTGGTGA--GGAATAAGT-TTATGTATAAACAATTCCTTCAACTGCTCTTAAACACTTGTTCTTAAA---------CAAGTATTTATGACTGGTGGAGCACAGGCATTGT-------CTGCAAGTAG--AACTGATCTTTAATGAAATGAGTTCTAAACAGAAAGACCTATAAGTTATTTTGCAAGATAGATCCATCAGTACCTTTCTTCCTGTGACACCTCTGTGTGTGTGTGACATTCTAGCATTTATTTATGCTTA-----TTAAATGGTGTCGAA--------TGCTGAAGACT--------GGACATTCAGAtttttttc--ttgcttttcttttttttttttttt-GTGATGAA----GGTAGAAGAAGTTCTTATGAGATCTCTTTTA------------------CTCTCAGCATAACCtttttttttttttttttt-----------ttttAATCTGTCAGCTGTCAGTTCGTGATGCTGAAGCTTATATCTGTAGTTTCATTTTCCCCCATGCTTTCAGGCATGGATCTCTTCTCCAATTGCACAAAGGAATGTAAAGCACTGGGCCATTCAAATCGGTGCTGGATGCCTTCCTTTGTCCCATCTGACGGACGCCAAGCTGCAGATTACCGCAGCAATCTGCATGTACCTGGCATGGACTCCGTTCCAGACACTGAAGTGTTTGAAACACCAGAAGCCCAGCCGGGGGCAGAAAGGTCCTTCTCCACCTTCGGCAAAGAGAAGTCTCTTCACAGCACTCTGGAGAGGAAGGAGTTGGATGGACTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAGTAAGTACTATTCAGAAGGCTGTATGAAAGTGTTCCCTTTGTGGGAATAAAAATTAGCTCTTTCTCCTATTCATTATAGGAATAACACAAACACAATTTTAGAAGCAGTAGGGGAAAGTGACTTCCCTTGGATTGAGGCACCACCGAAGAAGGTGTTATTCAGTGTTTTTTTAAAA ...xx.::..x...-...x:.::::..:...:x..x...:x:..x....x:......x:.x..x...:.x.x....x.:...:...:.........................:.......xx:::x.xx........:..x..x:..x........::x:...:.::....x..:..x::.....x.......---..x.....:--.:..............x.:x.:...:......xx.x::x.:..:.-------------..:x:.x.....x.x..::---..:x:...x:.::.x...xx.--::..::.:x.--------....:.xx:xx.x.:..x.x..x.:x..-:....:.:..xx...x:....-:.:..-........----..xx.....----------.x.:.......:.xx.--:.:....x.:x:..x.x.:.x..x...xx..--..::.x:.:...x.....::.x.::x.x.x..x:.:.x------------...x.:.x:.x..xx.:x..:-------.x.xx.x:...x..x..xx..x:.---------...x.x...:.......-----------------...x.::.x...:....x:x.:.------:...x...:..:.x....:....x..------..:...-------------------------:...x....:.x----------------------..:::x....----.:x.x.xx..x.:.x.x..:..:..x..x.:-.::...:.-----..:.......:.:.:---------..x..x...x...:.::..:---.....---------.:..:::.xx.x..:..........::..:.:x.:.------.:xx::.x.......:------....:.:x.:.--..:.:x:.x...:..::..x.x.:.-----..x..::x....x----.x...xx.x:....:x:....:x......--.x.::x..xx...x::.....x..---......:..---....--......x.x......:..---.......x..x...x:..........::.:.x....x:.x:...:.:....x.x.::.....::.x...:.x....:xx.:.....:.......::::.:..xx..:.......:.-::.:......x:xxx:::......x:..x------....:x:x.:.:---------:..xx..x:.:..::..-...:....x:x.x..----...:.:.:x::...--..x....--.....--------.....x...:...:.:-------------..:..----...:::.x.::..x....:....-------.:.x.x.:x.:.:...::x.:.x.-----.....x...x-..xx.:.:.:x-----..:.:x.....:::.--....xx:x.:.x..x..-.x:.x...::.:x:.....:.---------:.......x--..x...xx.-......----------------------------:.:.....:....:---------...:.......x.:..x.:.:.xx..x.x...x.-------:.:..xx.x.--:x:.x....x.x.....x.-------------------::.:...xx.....x:..:.x.x:..:.:..x.x::x...x:.x.x.xx..x:.x.x.:x:.-...----..xx...xxx.....-...::.-----:...:.:..x.x...--------:x.x..:.x..--------.:.x.x..xx..:....x.--....xxx..x....:::.....xx-........----::.:::.x..:x.xx...xx.:.::..x.:.------------------:.x.:.:x.:...:.:x:..x.:x:::...x.-----------.:...xx...::.:x.:x.x.x..:..x..x.....x:..:...:........xx...:.----.....x....:.......................x:.............x........:...:...................:........x.....:........:.....x.....:.................x..............:..............:...........x..............x........:x.......:........:............x.:...........................:..............x.......:...................................:..:x..:.:....x.:.x...............x..::.....:x.:.:--.x...:x..x..:x.x:..::...::x::xx.x::xx.....::.:xx:x..:x:........------.....xxx....x...:xx..--..::x.....----...x....... 14M1I178M3D9M2D45M13D19M3D21M2D10M8D28M1I21M1D5M1D8M4D9M10I16M2D31M2I38M12D21M7D24M9D17M17D23M6D26M6D6M25D12M22D10M4D31M1I8M5I15M9D20M3I5M9D36M6I16M6D11M2I25M5I13M4I29M2I24M3I9M3I4M2D18M3I116M1I29M6I12M9I17M1I15M4I14M2D7M2D5M8D16M13I5M4I23M7D24M5I10M1I11M5I15M2D17M1I21M9D9M2D9M1D6M28I14M9D34M7D10M2D19M19I62M1I3M4I15M1I6M5D15M8D11M8D19M2D24M1D8M4D31M18D32M11D60M4I372M2I63M6I21M2I10M4I11M 1407/2076 67.8% 2248/94230402 0.0% 453/2076 21.8% 105161778 85052777 +3366 chr4 + 190214555 133162958 133162957 133163046 89 TTCTGTTTTCTGCTTACAGGT-------ATGGATCTCTTCTCCAATTGCACTGAGGAATGTAAAGCTCTGGGCCACTCAGATCGGTGCTGGATGCC chr4 + 94230402 5281181 5281180 5281269 5281181 5281180 5281269 89 TTGTATTTTCTCCATGCAGATCAGAGCGAAGGATTTC-------ATTGCAGGGAAGAATGCCGCATCCTGGGCCACTCGGACCGGTGCTGGATGCC ..x.:......x.x.:...:.-------.x....:..-------......xx..:.....:x:x:::...........:..:.............. 21M7I9M7D52M 62/82 75.6% 89/94230402 0.0% 14/82 17.1% 127881777 62332778 +57016 chr4 + 190214555 133189935 133189934 133190900 966 TATAAGAATATCAAAATTATCATTCTCAGAAAACCAAACAACAGAATGGCTGTGACTACTAGCAGTGAAAAAGT---TTGACACTACATGTGTTTGGTATGAGGGTA-----------CAACTAGTTTCTAACTGTATTCTTTCTTTTACAATAATGTGTAATTCTAAACTCCAAAA----------------GTCAACCTCTTTTTCTTAGA-GTATTTTTCTTTCTTTTTCACAGCACGGAAAAGGATATGCTAGTCAATTCTACAGGACTTACCTGAAGCAGCATGATTTGCACAAA-GTCGACCAACAAAA-GCATCAACTTTTCAACTTCATTATCTTGGCCATCCAGTTAGTCATGTGTAACTGA-GTATTAGATTTCGGATGGAGTCATCATGGCCAATTATAGGACCTAATTGCTCTCAGCAGGCCTGAGAAATGAGTTGAAATGTGCAGAACTGTAGAAACTTTAGAGGCAACAGATTTTGCCTCCCCGATCAGTGTGTGCCTGTTTACAGCACTATCTATCTTTCTCTCTCC-AAATGTCACTGAGCCCTTTAGATGTTTATATTCACCACGAGAAGCCAGTCATAAAGATAAAGGAAATTTGTGCATTATAAATGCAATATCACTGTTTTAAACTTGACTGTTTTATATTATTTTTGTGTGATCAAGTGTTCCGCAAGCTATTCCAACTTTACAAGAGAAATTGTGATTATGTTCTTTTCACCTGTGGGTTATAAAAAATGTTG-TATTCTGAAGACCCACAAAA-TATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGTTTACTGTACTATTTCAAAGCTTCTAAATAAATATAAA--ATATATATATTATAT--TATATAATTTTCCT-AAAATGTGGTACAACTCAGTTGGTTTTTAAATGGATGCATACAGTCCACATCATACAATAAAAT-AAAAGGTAATTCAGGGTCCCAAAGACAAACTTACTAAGAAAAAATCATTAATA chr4 + 94230402 28018245 28018244 28019235 28018245 28018244 28019235 991 TAAAACAACATGAGAAGTTTGTTTTTCAGACTATCAAGCCTCAAAAAGACTTTT--------CTCTGAAAAAGTGAATCAACATTAAAC-TGTTTGCTACAATGGGAATTTTAAGCAACAGTTTGTTACAAGTTTTGATTGTCTCTCTACACTA-TAAGAAATACTAAACCTAAGAACTGTTGGGGACTGACTTTTTTCCTTTTTCTCTCAGAAGTGTCTTTCTTTCTTTCCTGCAGCACGGAAAAGGATATGCTAGTCACTTCTACAGGACTTACCTGAAGCAGCATGATTTGCACAAAAGTCGACCAACAAAAAGCATCAACTTT-CAACTTCATTATCTTGGCCACCCAGTTC----TGTCTAACTGAAGGATTTGTGTGCTGTTGGAGACATCATGGCCAACAATAGGACCTAATTGCTCTCAGCAGGCCTGAGAAATGAGTTGAAATGTGTAGAACTGTAGAAACTTCAGAGGCAACTGATCTTGCCTCTCTGATCAGTGTGTGCCTGTTTACAGCACTATATATCTTTCTCTCTCCAAAATGTCACTGAGCCCTTTAGATGTTTATAATCACCACAAGAAGCCAATCGTACAGATAAAAGAAA--TGTGCATTATAAATGCAATATCACTGTTTTAAACTTGACTGTTTTATATTATTTTTGTGTGATCAAGTGTTCCCCAAACTATTCCAACTTTACAAGAGAGATTGTGATCATGTTCTTTTCACCCGTGGGTCAT-AAAAATGTTGTTAATCTGAAGACCCACCAAATTATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGTTTACTGTACTATTTCAAAGCTTCtaaataaatataaaatatatatatattatattatatataattttGAGAAAAATGTGGTACAACTTAGTTGATTTTTAAATGGATTCATACAGTCTACACCATACACTAAAATGAGAAGGTAATTCAGGGTTCCTAAGCTATCCTTGCTAAAAACAAATATTAAATA ..x..x..:..x.:..x.x.xx..:.....xx.:...:.xx..:..x.:..x.x--------.xx.........---.::...:..x.:-......x..::.x..x.-----------..::.x...x.x.::.x.:x.:x.:::.:....x..-.:x.x...x......::x.:..----------------x.:xx...:...:...:...-..:.:...........::::..........................x.......................................-..............-...........-....................:......x----...x.......-.x...x.xx.x.x.x.....x............:x................................................:................:.........x...:.......:.:.............................x...............-..............................x.......:........:..:..x.......:....--.........................................................................x...:.....................:........:..............:......:..-..........-..x.............x...-................................................................................--...............--...........xxx-................:.....:.............x.........:...:......x......-.:...............:..x...x:.xx...:....:..x....xx.x.... 54M8D12M3I12M1D17M11I36M1D22M16I20M1I86M1I14M1I11M1D28M4D11M1I170M1I66M2D133M1D10M1I20M1I80M2I15M2I14M1I64M1I53M 820/948 86.5% 991/94230402 0.0% 61/948 6.4% 105171690 85042865 +14420 chr4 + 190214555 133190937 133190936 133191433 497 TTTTCCTTGTTTAAAAGAAAATG-----------------ATGCTCTAAGCTACAAAATTTTGTCAAAAACTCATATTGAATTTTCAATGCCAAAGATGTAGCTATTGATGTTATCAGACAGAGCACTGACTATGTACTATCA-AACTATCTAACAATCTGCATAAGTCTGATTCTATTTCTATGACTTTGAATTTAGAATCACTTAAAGCTTTTATAAAGAATCGATAAATTCACCTGTATTTGTTGTTAGAAAAAA-ACTGGGTGTCTGTACATTTTGTGGTGTAAA--ATATGTAATTGAAGATTACTATTTTAAG-AAGTCATC----AGTCATA-----------------TCACTCACACAGA-------AT-TTTATTTTACATAGTTTTGTGACTTAATTACACATGAATATAAAATCTATAA-----TTCTATATGAATATATAGAGATATAGAAACATCTGAACTGGTAAAGAATAACTAT-----AAAATATGAAAGCTCTAAATTTAAAATAAATTTAGAGATAGAATCATGGTACATTATTGTTT chr4 + 94230402 28019883 28019882 28020424 28019883 28019882 28020424 542 TTTTTCTTGTTTaaaaaaaaaaagaaaaaaaagaaaaaaaaaGCTGTAAGCAACAACATTTTGTCTAAAAGTTGTAATGAATTTTCAATGCCAAAGATGCAGCTGTCAATATTACCAGAATGAGC----GCTATGTACTATCAGAGCTATAATTCACTCTCCATTATTTTGATGATATTTCTATGCTTTTTAATTTGGAATCA-TAAAACCTTTTAT-AAGGCTCTATAAGCTCACCTATATATGTTGCTGAAAAGAACACTGAGTGTCTGTACATTTTGCAATGTAAGATATATGTAAGTGAAG-----TATTTTAAGAAAATCATCCcaaactcataaatatgcatacgtacatacacacacacaaacacacgcataTCTCTCTGACATACTTTTGTGA---AGCTATACA--AATATATTGCCTAAAAATATTTCTCTTGTGGCTAGGAATAGTTATTGATAGAATTCAAACTACAAAGGCAAACTATATGCCAAAATATCAACTCTTTTATCACAAAGGATGTTTGAAATTAGGAACACGGCACATTCTCATCT ....:...........:....x:-----------------.x...x.....x....x........x....x.::..x......................:....:.::..:...:....xx....----:.............-.:....xxxx..x...x...x.x.:....xx..........x:...x.....:......-.x...x.......-...:x..x....::......:...x.....:.::...:..-....:................:::.....:--........x.....-----.........-..:.....----.x.....-----------------x...x......:.-------..-.:.x.:.x.....x........---.::..:...--......xx::...x..-----.:::x.:..:x..x:x.x..x...x..x.x.x:.x..x:x::....:xx......-----.......x..xx..:.x.x:x:...:x.x:...::.:x...:.x..:..:.....x.::.:. 23M17I85M4D14M1I59M1D13M1D40M1I30M2I14M5D9M1I8M4I7M17I13M7I2M1I22M3D9M2D16M5I55M5I62M 355/481 73.8% 542/94230402 0.0% 77/481 16.0% 105171054 85043501 +19324 chr4 + 190214555 133207087 133207086 133207582 496 ATCATTATCTTGAAAT----GATATCTAAAGTAATTTTAAATCAATAATGTTAAAACCAAAGGGGTAAT---ATGCATTGTTAGATTTGTTATAGATTAGAATAGCGATTATTTATTCAATTGTTTCTAAGGTTATTATATTATAT-----TATAATATAAAACTCAATATCCCTTTTTGGTCATTGCATTGGTTTATTTACCATATTACTCTATTTTGAATAGTGGCCTGAAATTAGTGTCCAAATAGTATCAGGCAACTAGCAAGCTTCAATACTTGAGGTCAATTTAATTACACTGTGCATGACAGAAACTAGGCCATTTGGGCATTGCCTTTGCCACCAGCAATTGACACCTGAGTGTTAATGAGCTGATAATTAAGAGCTGGCACATACAGACACATTTTACTGTTTGGGACTAGGATAACCATATGCTGCATAACTTCTGTGCT---------AAGTACTTTGTTAGCTCCAGAATTTACACAATTATATTTGTGAGGT------TTTTTTTTCAAA chr4 + 94230402 28032904 28032903 28033419 28032904 28032903 28033419 516 ACCATTATTTTAAAATAGTAGACAGCAGTTGAAGTTTTAAATCAACAACAC--ATATTCAAATAGTACTCCAGTTCATTATTAG-CTTGGAAGAAAACAGAGCAACGATTATTTCCCTAATTGTCCTTAAAGTCATTATTACATATGCAAGTACAATTTGGTACTCTCCAGAGTCTTTCCCTCATTACACTGTGTGATTCACTAAATTACACGATTGTGATTAGTG--CAGCAATCGGTGTCCAAGTGGTATCAGGCAACTACTGGGCTCCTTTTGCAGAGGTCAATTTAATTACATTGTGCATGACAGAAACCAGGCCAACTGAGTATTGCCTTTGCCACCAGCAATTGACACCTGAGTGTTAATGAGGTGGTAATTAAGAGTTGGCACAGACAGGCACATCTTAGTGTTTGGGACTGGGATTACCATATGCTTCAATGCTTCTCTGCTAAAAGGCTGAAGTTATTCATT--TTCTAAAATATACAGGATTTTAAAAGAAAGGCAAATTATTACTTTTCAAA .:......:..:....----..:.x.x:xx.x.:...........:..:::--.x.::x..:x:...x.---:.x....:....-:...xx.x.:.x:...::.:.........x:::......:::...:..:.....xx:....-----..:...x.::x....xx:.xxx::...:xx.....:..:..xx.x...:..:.x.....x.x...x...x.....--.x.x...::........:.:..............x:::...:.xx.xx:x..................:................:......x:..:.:..........................................x..:..........:.......x....:.....:...x...........:....x..........x..xx:.....x....---------....xx..::..--:..:.:...x....x:...x..xxx.x:...:------..x:........ 16M4I31M2D16M3I12M1D61M5I75M2D222M9I12M2D32M6I12M 357/489 73.0% 516/94230402 0.0% 34/489 7.0% 105174183 85040372 +28785 chr4 + 190214555 133208564 133208563 133209088 525 TCTACTGGCTTAAAAAAAATAAAG-CTGTACTTACCAGATGAAACATGTACTAACTTTAGTGAATTTTAGTTGTGGGAATTACTTCTAATTTTCTTCTTTGAAACAGTTTGCTTTTCCATA--GAATCCTCTGTAGGACGTATAGCCTTTTATATGCAGATTGGTATAATTATGCTTTGAAATAGCTCTGAATTCCCTGTAGCTTAAACTGAGAACATGAAAGGCCAAATGTTATGTCTAACTGAAGGATATAAAAGT-GCACATACATCAATCCAAAATGAGATATAGAAATGAACGGCTCTTCACACAGTGATGTCAGTTTTTGACAGATTATTGAAGGGTCTTTATAACTGCAGAGATTGCCATGGGTAGCATGAAAACTCTGCCTGGGGATAGCCTTATCAGCTTGTATTTTGTATTTCTTCAGTACTGAAAGGTGAGTAGATGTTAAGCGAAACAAGAGAAATACTCTGTGACAAAAGCATTAACTCTCGTT--------CCAAAAATGACATCTGGTTTCAAATGGCAAAA chr4 + 94230402 28035255 28035254 28035787 28035255 28035254 28035787 533 TCCAGTGGCTTTACAAATCCACAGACTGTTCACATCAGATGAAAAATGTATTAACTTTACTGAATCTTAGTTGTGGGATTTACTTCTAATTTTCTTCTTTTGAGGAGTTTGCTTTTTTCTGCTGAACCCTCTGTAGGACATATAGCCTTTTATATGCAGATTGCTATAATTATGCTTTGAAATAGCTTTGAATTCCCAGTGGCTTAAACTGAGAACATGAAAGGGCAAATGTTACGCTGAGCTGAAGGATATGAAAGTGGCACGTACATCAATCTAAAATGAGATATAGGGACGAACAGCTCTTTACACAGGGATGCCCGCTCTTGACAGGTTATTGAAGGATCTCTGCAGCCACAGAGGCTGTCTTGGGTAGCACGAAAATGCTGCCTGGGGAGAG-CTTATCAGCTTACATTTT---TCTTTTTAATACTGAAAGGTGAGTCAGTGCTACACAAATCGGGAGGAACAGGCCACCACAGAAGCTGTCATACTCCCTGCTGCTGGCCAGCACCGCCTCCTGGCTCCAGAAGAGAAAA ..:.x......x.x...xx:.x..-....x.x:.:.........x.....:........x.....:............x.....................x:.:x...........::x.:--...:............:.......................x.......................:.........x..:.......................x.........:.::x.:...........:.....-....:..........:..............::.:....:......:......x....:.x.:.:.......:..........:...:.::.:.::.....::..:.x.........:.....:x...........x..-...........::.....---.:.:..:.:...............x::..:..x:.:..x.::...:..:.xx.:::x...:....xx.x.:x...x:.--------...:x.x:.x.x:....:.:..:.x.:x.... 24M1I96M2I135M1I138M1D18M3D78M8I32M 410/521 78.7% 533/94230402 0.0% 16/521 3.1% 105173309 85041246 +6662 chr4 + 190214555 133243412 133243411 133243624 213 AGAAAGTAAAACTTCAAGAAATAAACAG-TGCTATTTTAATGAGT--TATTGATGAATTGCTCCAGGATAGCAGAAAAGCATTTATATACTGCAGCTAGTTTAAAGACAGGTGACCTTTTAAGAGATTAGTTAACCTTTCAGCAATTTTGGAGAGTTACTGTTTTGAAAGATAAAGGTCAGAGCAGAACTCAGAATGCAGTTAT--TGTGTTCCCTGT chr4 + 94230402 28043366 28043365 28043572 28043366 28043365 28043572 207 AGGAGGTGAAAATACAG--AATGGACGGATGATATTT-AATGAACAGTAGCTGTGTATTATT---GAACATCAGAAAAGGATCTATATA-----GCCAGATTAAAGACAGGTGACCTTTTTAGAGTTTAGTTAACCTTTTGGTCACTTTTGAGAGTTATCACTTATGAAGATAAAGGTCAAGCTACAGCTTAGTCTTCATATATGATCTTTTCCCTGT ..:.:..:...x.x..:--...::..:.-..x.....-.....::--..x:x:..x...::.---.:.:.x........x..:......-----..:..x....................x....x.............::.:x.:...x........::::..xx:.............::x:.x.:..:..xx.x..xx...--.x.x........ 17M2D9M1I8M1D7M2I15M3D24M5D110M2I12M 147/202 72.8% 207/94230402 0.0% 16/202 7.9% 105200046 85014509 +3866 chr4 + 190214555 133251748 133251747 133251830 83 CGTAGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:--....x......:.........:.::........x.xx.x...x............::..x.xx:..:..:.. 9M2D72M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 57218551 NA +12388 chr4 + 190214555 133287493 133287492 133287870 378 GGGGCCTCCTTTCCCCTGTTGTGTAGTCACTAGCAGTTTGGAAGGTCCAGCAGACGCTCATCCTGTGTGCCTACTAAGCATTTGAG----GAATTTACTTGCAGTTGAAACAATTATACAGTACCATGGAGGGATGTGACAGTAGAGATAATCAGTCCCTTAAGGCTATAAT-------------GCATGGTTACAAGTCAGGGTGCCAGACAAGAACACTAGGGCTAACACACAGGGCATCTGCCATTGCAAACACATAAAAGGATGTAGAAATGTATCAACATGATCTAGTAAATGGACGGAACAGCTGTTTCATTAAGTTTAAAACTAATTGCTTTAGCCCTTGTCACACTAATGGCAATACTGTTCCTGTTACTGCTGATTCAGAAACAAT chr4 + 94230402 28061309 28061308 28061676 28061309 28061308 28061676 368 GGGACATCTCTTTCCCCTCTGTAGAACAACTAAT-GTTTAGGCAGTTTAGCAGAAGTGCATTCTGT-TGTC-----AGCATTAAAGCATCAATAGTACTTGCTGGTGAAACAATTATACAGTACCATGGAGAAGTGTGACA--ACAGATAATCAGGCTATCAGGGTTATAATCCGTTCCTTGTATTCGTGGTTACAATTCAGAGTGACAGAGGAGGATGGTAGGGCTAGTGCCCAGGGCACCTGCTGTTACAAATGCACA----GATATGAAATCACTTCAGCATCATTTAGTAAATGGAAAGTGTAGCTATTTCATCAAGTTCATATATAATTGTTTTAGCCT-----------ATGGCTTGAATAATCATGT---TGCTGAATCAGCAATAAT ...:.x..::..:...:x:...:x.::x....::-....:.:x:..::......x.:x...:....-..:.-----......x:..----:.xxx.......x.x..........................:::.......--.x..........x.:x.:.:..:......-------------x.:.........x....:...x....x:..:.::x........:::.x.......:....::..:....::..:.----...:.::..x:::x...:...x..:...........x:.x::....:......:.....:.x.xx......:.......:-----------.....xxx.x.:x..x...---......x....x..:... 34M1D31M1D4M5D10M4I51M2D29M13I75M4D80M11D19M3D18M 251/351 71.5% 368/94230402 0.0% 44/351 12.5% 105226184 84988371 +3105 chr4 + 190214555 133290548 133290547 133290612 65 TCTCCAATTCTCTCTCCATATGTGTGTATGTGTGTGTGTGTATATATATGTGTATATATATATGT chr4 + 94230402 65759972 65759971 65760036 65759972 65759971 65760036 65 TTTCATATCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT .:..xx..::x..:.xx..x....x......:........:...:..:.x...:....:...... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 67530576 NA +3421 chr4 + 190214555 133290567 133290566 133290636 70 ATGTGTGTATGTGTGTGTGTGTATATATATGTGTATATATATATGTGTATATATATGTGTGTATATATAT chr4 + 94230402 85834538 85834537 85834607 85834538 85834537 85834607 70 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ..x.....x.............:.:...xx:....x::...:..:....x...:....x.:.::.:.:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 47456029 NA +3237 chr4 + 190214555 133290594 133290593 133290657 64 TATGTGTATATATATATGTGTATATATATGTGTGTATATATATGTGTGTATATATATATATAGA chr4 + 94230402 86633930 86633929 86633993 86633930 86633929 86633993 64 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGA .::...::..x:.......x.:....:...:....:......::.x.....::..x.:...:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 46656664 NA +3103 chr4 + 190214555 133290596 133290595 133290672 77 TGTGTATATATATATGTGTATATATATGTGTGTATATATATGTGTGTATATATATATATAGAGAGAGAGTAGACATA chr4 + 94230402 86633934 86633933 86634010 86633934 86633933 86634010 77 TGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATGGAAGATGAAGATGGTCTTA ..:...x:.....:.x......:..::...........:..x...:.::..x.:...:x.:::x..:::.:.x.x.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 46656662 NA +3512 chr4 + 190214555 133299344 133299343 133299409 66 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACACAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........:.--....:.:...........::........x.xx.x..:x.........x...:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 57266143 NA +10863 chr4 + 190214555 133372760 133372759 133373016 257 AAAAATCAATC----ACAATTCCACTTTATATC-ATAAAGTAAACTGTTTTGCAGAATTTAATAGGATTATGCTATCGATTCCATCTACACAATGCTTGCTCGTATTGCATACCTATGAACTATGGCCTATTATGTTACTGAGCACAGGAGAAAAGGGATTAGTCTGTGAAAGAACAAGCTGATTTC------ATGCCTCCACACAATGTTCACATACTTGTTAACTCAATAGTCATTATATGTTAGTAAATGTCAACCAATAAAACA chr4 + 94230402 28088573 28088572 28088830 28088573 28088572 28088830 258 AAAAATCAATTTAAGAGGATTCCAGTATGTATCTGAAAAGTAGCCTGCTTTGCTGAATTTAATAGGATTATGCTATTGATTCCATCTTTACAATGCTAGCTACTATTTGGTACTTGTGAACTGCAGACTATTATGGGACTGAACACAAGGGAAGAGGGATTAGTTTGTAAAAGAATAAGCAGCTTTTCCTTAAACTCCCCTGAACTAAACCGATGTACCTGTT----------TTGGTCTCTGTTAGTAAATGCCAACTAACAAAGCA ..........:----.x:......x.x.:....-:x......:x...:.....x......................:..........x:........x...xx....xx:...:.:......:::.x........xx.....:....:.:...:..........:...:......:....x.x...:------.:x..:.::x..x.x:::x.::...:....----------.::x.x.x............:....:..:...:.. 11M4I18M1I153M6I30M10D35M 184/247 74.5% 258/94230402 0.0% 21/247 8.5% 105284187 84930368 +14197 chr4 + 190214555 133387529 133387528 133387977 449 AAAGCCATTATGAAATACGCTGCTCTGTGGGGGTTCTTTTAACTGCAAGTCGTATTTGCTAATAGTTTTTTTTTTTTTTTTACTAAATA-CTTTCACAAGATTTATAGCAGAAATGATAGCAGTAAATGTTCAACTGTATTGTATTAGTAGTAGAAGTTTTGTTGAGCTCATGGCATCCTTTGATTAACTACCATTGGAGACATATTTTGGAACAGGG-CTGTGTCATGGCTCTATGTCACCATGTTTCATG-------GTGGGCCTTTAGGGAGGGTAAGTGTGTAAACATTCACTTAACAACAGATGTATGGACAAGTTGTGAAAGTAATGACTAATTGACTGCCATTCGGGATTTATTTGGAAATCTTTTGACTTCAGCTCCACCACACTTAATGATGAATGAAGTCTCTTTCTCTAATAGAGGG--------AAACAGCAAGCTTGGGC--CCAGAGCAGGCAC chr4 + 94230402 28090528 28090527 28090978 28090528 28090527 28090978 451 AAAAACACTGTGGAATGTATCGTCTTTTATATGTTTCTGGTAAAGCAAGCTGTATTTATTAGGAGTTTGTTGCTAC-----AGTAAAGAGCATTCGTAAGATTTATGGTTGAAATAATAGCTGTAGATGTTCAGTCCCATCGTATT--TATTGAAGATTTTGTTGAACTCATGGCATTCTTTGATTAATTGCTGTCTGAGGCATATTTTGTAGCAAGGACTGTGTCAGAGTTTTGTGTCACTGTATTTCATAAAGTTGTGCTAGGCTGTAGGGAGAGCAAATG------CATTAACTTAACAACAGGTGTGTGGGCAGGTGGTAAGAGTAATAACTAATTGACTGCCAGCCAGAATTTATTTAGAGAGC---TGGCACTTTCCCCTCCTCAAGGAATGATGGGTTTCATGTTTTACT-TAATGCAGAGTGGCCATCTAACTGCAGGCATGAGCTTCTGGAGAGTGCAC ...:x..:.:..:...:::::.:::.x.:x:x...::.xxx.xx.....::......::..:x.....x..x:.x:-----.x....x.-.x...::.........:.:x.....:.....x...:.......:::x:..:.....--..x.::.::.........:..........:..........:.:.::.:x...:.........x.:..:..-........x:.:.:.:......::.:......:-------.:x:.x..x.......:.:..:..------....x............:...:...:..:..x..:.:......:...............x:.:.:........:..:.x.---..:.x::xx.:..x..x..xxx.......::.xxx:.x.:..x..-....:x..:.--------x...x...:..x..:..--.::...x:x.... 76M5D8M1I56M2D70M1I33M7I24M6D80M3D45M1D10M8I17M2I13M 295/432 68.3% 451/94230402 0.0% 36/432 8.3% 105297001 84917554 +11405 chr4 + 190214555 133407034 133407033 133407306 273 AATATATTATTCCTGTGAAGTATCAGCTTTACTATTGTAACATTTACAAATCTTATATTTTTGACCTTATAAGCCAACTTAGATTCCTGTCTAGGGGCCTATAGAATAAATGTTAACTACAGATTTATGCAAATATACACATTAGTTGGCAAGTTAAATGTTAAAGTGATGCTTTGAGGCTGAAAAAATGACAAAATTAAGGAAAATATGAT--------AAAAATTAATGAAGCCTATAAAGTAGAACATATTTACTTTAGTTTTTTTATTATTGCAGTG chr4 + 94230402 28098603 28098602 28098877 28098603 28098602 28098877 275 AATTTAATATTCTGCTGAACCTCATGGTTTACTGTTGTAACATTTACAAAGCCTATTTTCCTGACCTTATACACTAACTCAGGCTTTTGTCTAGAGGCCTATAGAATAAATGTTAAGCACAGGTTTATGCTAATATGCACATTAGTTTGCAAGCTAAATGTTAAGGCAATTCTTCAA----AAGGAAAAAGTAGAATCGAAGGAAGCATCATCACAGTAGAAAAACTGAACAAACATATACAGTGTAATACATTAATATTATTCTGTCTA--ATTGTACTG ...x..x.....:xx....x:x:xx.x......:................x.:...x..::..........x:.:....:..::.::.......:.....................x:....:.......x.....:..........x.....:..........:.::..x...::.----:.::...x:::.:...::.:.:..::..x..--------.....:.:.xx..:.x....x...:x..:.:...x.:x...x.:.x.:..--....:.x.. 177M4D31M8I50M2D9M 192/267 71.9% 275/94230402 0.0% 14/267 5.2% 105308431 84906124 +3196 chr4 + 190214555 133416767 133416766 133416834 68 AGGATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATAATTTCTTTTT chr4 + 94230402 6857605 6857604 6857672 6857605 6857604 6857672 68 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCT .:..x..:...::..:::.::..:.:x:.........x...........x.:x.x.......:...:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 126559162 63655393 +9948 chr4 + 190214555 133417433 133417432 133417868 436 ACTTTAAAAGATTTTCTTTTGCAAGATTAAGTCAATTGACTCATCAATA--AATTATAAATAGAGTTAACTGGTTTATTTTTAAGGAACAAACAAAGAG-ATAAACACTTTAGAATCAATACATGCAATCAAACCTGTTACAT------GTTAGTGATTAGTTTCATAGTTAATAGATGACAGAAA------CTTTTATTGGAACAGAATTGAA------TGTGCCTGTTAGTAACAATGGG------TAATAATAAAGTACAAGTCTATGTAACAGAAACAAATGAAGTGTAAAGTAAAATAATAGAAGAACATGACAATGGGGATTTTTTTTTTTATTTGTCTGTTCAGTGTCGTCAGAAGAGAGTACATCAT-----AAGCAAAAAGTTCACTTTGATATCTGCTAATTTCATGGATAGAAACATAAGTGATTGATCAGATAACCTGCTTTACTAAAGTTTATTT chr4 + 94230402 28105368 28105367 28105805 28105368 28105367 28105805 438 ACTTCAAAAAA-----------AAAATTA---CAACTCATTAATCAATATTCATTTTTTATA----TAAAAGCATTATTGTTTGGGGGCATCTAAAGGCCATGAATACTCAAGAGTCAACATATATTATTAAAACTGTTGAGTATCACAGTCATTCATTTGTTTCACTTTAAAT-GCTGACAAAAAAAAATTCTGCTGTCATAACTGAATCAAAATTTCTTGTGCCTGTTTTCAACAACAGAACACCCTAACAATAAAATGCAAGGCTATGTAATAGAATTGAATGAAGTGTAAAATAAAATAATAGAAAAACATGACAAGCTAAATGCTTTCT--------GCTATGCGGTGTTCTTGGAAGTGAGTCCATTACAGAAAAAGAAAAAAGTT-ACTTCCATGTTTGCTAATTTCA-AATTAGAGATATTTCTGACTTGTCAT-TTACTTGTTTGAAGAATTTTTGTTT ....:....:.-----------..:....---...:.x.:.x.......--x...x.xx...----...xx.xx.....x..x:..::..xx:....:x-..:..:...:x...:....:.:..::x..:...x.....:x:.------..:.x.x...x......:xx.x...-.x.....:...------..x:.:.::x...x....::..------..........xx:.....::.:------...:......:.:....x........:....x::.............:.............:..........xxx::..x:...:.--------x..:.x.:....:x.::....x....x...:.:-----...x........-....:x..:.:...........-::x....:.:..xxx...:.x:...x-.x..:..:..x.xx..xx...:... 11M11D7M3D17M2I11M4D33M1I43M6I25M1D11M6I22M6I22M6I86M8D33M5I12M1D22M1D26M1D25M 285/406 70.2% 438/94230402 0.0% 62/406 15.3% 105312065 84902490 +3024 chr4 + 190214555 133420585 133420584 133420654 70 TTTCACAAATATGTTAAAATTACCAAATTGTTACTAATTGATACTTTTTTTTGATCCAAGTTAAATGTCT chr4 + 94230402 43580824 43580823 43580893 43580824 43580823 43580893 70 TTTCACAAATACATTTAAATCACCATAATTTTATTAAATCATATTTTCTTGTTCTACAGGTTACATATTT ...........::..x....:....x.x.x...:...x.x...:...:..x.xx.x..:....x..:.:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 89839761 NA +10894 chr4 + 190214555 133424644 133424643 133424976 333 TTTTATGACAATCTG-CAGGCACTCAGGAGAACTGGATGGGCAATTCATATAATTCTACCATATAATGCAAATTTGTTTGAACTACAAG-----CTAACATTTGTCTTAGTAGTCAGATGAAGGTGAACACTGAGTACCGTAGAAAAGCGAGTGATTTATGATCCATGGGAAATGATTCTGCCCCACCGGCTGGTTAAGTGTGGGGCTTTAACAGCTATAAAGCATAAATCTACAGTCTATGAGGCTGCTCGGGTTTATTACTATTTTTCTAAC---TTGAGAATTTTCCTGTTGGGGATAGAACCACCTTGTCTGGTCATTTATTACTCATGCTTAAAGCT chr4 + 94230402 28108330 28108329 28108662 28108330 28108329 28108662 333 TTTCCTGATGATTTGGTTAGTTCCCAAAACAACTGAACTGGAAATCTGTCCCATTCCAAAATGTGATGAAAATACAGTTCAATTAGACGGTACAATAGTATTAGTCTTGGTTGTAGTATTGAGTTGAACACTGCATGCTGTTGAAAAGCAGCTGATTCATGATCCATGGGAATTGATACCGCCCCACCAGCTGCTTTAACGTGCAGCTTTACTAGCAATAAAATATAAATCTTCTCTCTACTAGGCAACTCAGTTTTATATACATCTTTCTAACAATTGGAGAGTTTTCCTGTTGAGGATCAAA---------TTTTTTATCCATTTCTAATTTTCAAAACT ...:x...::..:..-:x:.:x.:..::.x.....:.:x..x...:::.x:x....:.xx..:.:...x....x::x..x..:..x.x.-----x..::...x.....:..x..x:x..x:..x.........x:.:.:..x.......::x.....:..............x....x.:........:....x..x.::...x:......x:...x.....::........x.xx....:x....x:...:.x.....xxx:..:........---.x....:...........:....x:..---------:.xx.:..::...x..x..x:.:...:.. 15M1I73M5I180M3I27M9D29M 219/324 67.6% 333/94230402 0.0% 18/324 5.6% 105316314 84898241 +3587 chr4 + 190214555 133426783 133426782 133426865 83 CGTGGTGATGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAACCCAGGAGACGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::...:....:.--......:...........::........x.xx.x...x::...:.......:..x:xx:..:...:. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 57393586 NA +4889 chr4 + 190214555 133434875 133434874 133435048 174 TTTTATAATTTCTAAAAGGCATCGCAAGATAGAACATGATCAAGGGAACTCACACTC-----CTGACACCTTTGAATCTTAAATAACTTGATTTATAATTGATGATTGATGCACATTTTTATTTCTGTGTGAAAGCTACATAAACAAATAGGTAGTTACATTATTTTATTCAGAGACAT chr4 + 94230402 28114095 28114094 28114251 28114095 28114094 28114251 157 TCTTATAGTTTGTCAAAGAAGCTGTAAGATGAAATATGATCAAGAGCATTCATAATTTGAAACTGAC-----TGAACGCTGGATACTTTGATTTATAATTGATGCTTCAGATACA-------TTATGTGTGAAAACTTC----------AGATAACTATGGTAGTTTACACACAGACAT .:.....:...x.x....:x:::.:.....::..:.........:.x.:...:.x.:-----.....-----....:x:.::...x:.................x..x.x::...-------..x.........:..x.----------..:..::..::x..x....:x..x...... 57M5I5M5D43M7D17M10D30M 108/152 71.1% 157/94230402 0.0% 27/152 17.8% 105320780 84893775 +12728 chr4 + 190214555 133435327 133435326 133435892 566 TCATTGTTACACACT----AATTAGTGCTGTACTCTGATTTGA---------GGCTTTAAATT--------TGTTCCTTTGAAGATTTTCTTA-AAATTGTATTCAAAGGAAAGGC--TCTTCTTTAATAAAACTGTATAATTCTTCATTCACTTGGGAAACATAGCTTCCCAGCATAATGCTGCTGAAAATCAGGTGCTGACTTCTAACAGAGGTGCTAATTA---TTAACATTCCAGCATCAGCAAAATGCTGCATTCTCTAAGACTGACATA-AATAATATGCACAAATATTTCTCCTCTATT-CCAATAAGTACTTG--AAAAATTCAATAATGTTCATTAAATACATAAATGTGAGAATACTAAAACTAAAGATTTTTCCCCTGTGACTTGTTATGTACTGT--CTGAAATGCAAAGCTGAAAGAAGGCATCATTATATG-------GCATAAAAAGAAATTATTTGGCTGTTAATTATAATGTAAATTTATCATTATAGCAGGGGAAAAGAGTGACAT---CATATTTAAAATCATCAGACATA---------GCTTGGTCACTCAAAGTATAGATGCATTAACCTTCAATAATTTTTACAGTACAATGTGG chr4 + 94230402 28114911 28114910 28115519 28114911 28114910 28115519 609 TCACTGTTGAAAACTTCAAACTCAATTATGGGTCCTAATTTGAACTAGGCATGGCTTGGCATTCTACAGTGTATGTTTTTGAAGATTTTCTCATAACTTCCATTCAAAAGACAGAAAATCTTCAAAAATTAAGCTTTTGATTTCTAGTTTAGCTTA--AAACTCAGCCTTTT-GCATTAT--TAGTGAAAATGAAAAGCAGATTTCTAATAAAGGAGCTAATTACTGTTAAAATTCTAGTGTCAGCATAACACTTCATCCTCACGGACAGGAATGGAATAGTA-GTTCAGATATTTGTTCTAAGTTTCCAATGAGAAGTTGGCAAAAATTCAATAATATTCATTAAATACATAAA--TGGAAATATTAAAAATAAAGA-TTTTCCCTTGTGATTTATTATACAGTGTGCTTGAAAAGCAAAATTGAAGAAAGAAGTCATTATCTGtttaaaaaaaaaaaaaaaagctataaaaatgttaattaaattGTGTAGTCCTAAGTAAGCTAGTGAACAAGAAAAAGATTTCCCTGCTTAGAATTGGAAGCCATATTTGTTCTGACTGGCTGGGTAAAGACATGAAAAGATTATCTTTAAATAAAGCAAACAGAGCAATATAG ...:....:x.x...----.x.:.:.xx..x:::..:......---------.....x:x...--------.:.x::..............:.-..x..x:.......:..x..:x--.....xxx...x..:..x.xx.x....xxx..x:...:--....x:...:.:::-....x..--.:x.......x.::x..x..:......:.:...x........---....x....:..::......x..::..x...:...xx:...x.:x..:-....:..-.:x..:......x.:..xx:..-.....:..x.x...--..............:.................--..::....:.....x......-.......:.....:..:....::.x...--:.....x.....::....::...:x:.......x..-------:x.x.....:..::...xx::x.........x.x...:x.x.:x.x.x..x:x:..x.:.x....:x:.x..---.x.::...:...::xx..x....---------:..x.x.x:x.x..:::..::.x:x....x.:..x.....xx:xx....x:....:.:. 15M4I24M9I11M8I22M1I22M2I38M2D14M1D7M2D42M3I48M1I7M1D22M1I14M2I32M2D21M1D28M2I36M7I72M3I23M9I59M 379/557 68.0% 609/94230402 0.0% 61/557 11.0% 105320416 84894139 +3186 chr4 + 190214555 133439174 133439173 133439295 122 GTGATCCCAGACAATTCCTTGAACTTTCCCCCCATATCTCT---------TATGTAAAATGTAACAGGAAGGAAGGATTAAATAAGAAGGAGAAGGAAAAGAAGAAGAAGGAGAAGGAGGAGAAGGGAAAC chr4 + 94230402 74778348 74778347 74778475 74778348 74778347 74778475 128 gtgatctccagaaatccttccaac---ccctgcaattctgtgattcAGACCATGGGGAACACAACTGGAATGTAGAATTGAAAAACAAGGAGAAGGAGAATCAGCAGAACGGAAAGAATGAGACAGGGCAC ......:.x::x...:.:.:x...---...:x..xx...x.---------:...x::..:::...x....x.x..:...:..x..x...........:..xx..x....x.::...:.x....x:..:x.. 24M3D14M9I81M 78/119 65.5% 128/94230402 0.0% 12/119 10.1% 58660826 NA +12723 chr4 + 190214555 133451873 133451872 133452386 514 ATACAGTTATATTCCTGCATATCTATTTCTTCCAACCAATTTACTTTCTGAAAAGTATTGAATTACCTTTTACTGGGTCAGCCTAAAAACATCACAGAATACAATAAATCCTTTTAATCTGACTATGTCCACAT--TTGGCCTTAATCTCTTTGTTCATTTTTGGACAC----AAATATCCAGAACAAAATTTTATTTTCCTCAGAGC--AGAGAAGCACTTTCTCTGGCTTTCATGTTTAACAACTCAACAACCTTTTGC-TCAAGATTAAATACTTTATTGTGTCTACAGGCAGTTGCATATTTATTACTCCTGAGGCAGTGGTATTTGAAATAAATGGAATTGAATGACTCGGTGAAATAGTTTCTGAAATCCATGTATCTTGAGTTGCTCTATCTCAAAGGAAAAGAAAACATTTCATAT-------------CCCTACTATGAGAAGATAGTTCATATGAGAAACACC-------AGGGCTATAAAAGTGAAGTAAACATTTT-----------ATTGTGGCTCAGTTTTTGTTTGTTTTACTGTAAGT chr4 + 94230402 28121553 28121552 28122086 28121553 28121552 28122086 534 ATGCAGCCGTATT---GCAGAT--ATTTTTCCTATATGATCTGTGTTTTG-------CTAAATTACTGCTTGTAAGTTCAGTATGCAAAAATTCTTATGCAGAAATAATTTGTCTAAACTATCTCTATCACTAACATTGGCCAAAGTTCTTTAATTCATTT--GGGTATCAGAAAGTATACTGAATAAGATTCTTTTCTCCTTGTGTCTAAAAGAAACAAATTCTGAGGTTCTCTTGTTTAACAACTGTGCAACCACTTGCATCAAGATTAAACACTTTGTTTTGTCCCCAGGCAGTTGTATATTTATTACTCTTGAGGCAGTGGTATTTGAAATAAATAGAATTGAAGGATCCTGAGAAATGTTTTCTGAAA--CACATATATTGAATTATTCTCTCCTGTGTGAACAGAAAGTGCTTCTGATGCTTCTCCCCCTGCCCTTGCAAAGGAAAATAGCTGATAC-AAAAATACCACATGATAGAGGTAGTGAATAGAA--AAGCATTTTTACCCATAGTCATTGAGGATT-TTTGCTGCTTGTTCTCCTGAAAGT ..:...:::....---...x..--....:.:.:.xx::..:.::x..:..-------:.:......:x:..::x:.x....:x.:x...x..:x:x:x::.x..xx...::x.:...x..:x..x.:..xx:.x--......xx.:.:::..x:.......--..::.:----..:...x.x...:..:...:.x..:....::x:x.--.:....:..xx....xx..:.:..x............xx:.....x:....-...........:.....:..x....:x..........:.............:.........................:........x..::.x.x.....:x.........--..::...x....:..::...x..:::x:x...x.....::::...xx..-------------....xx:.x::...:....:.x...:-.:...:...-------..:.x..xx:..xx...--..:......-----------....x..x.:-x..x:..:.....:.x...x.... 13M3D6M2D26M7D77M2I25M2D6M4I35M2I51M1I111M2D49M13I26M1D9M7I17M2D9M11I10M1D24M 335/494 67.8% 534/94230402 0.0% 60/494 12.1% 105330320 84884235 +9428 chr4 + 190214555 133465737 133465736 133466008 272 AACTTCATTATGATTGATTGAATCCTATTTGTGTCTCTGATAGCCAGAACAGAGTACGTTATTTATTGATCTCTTACCCACATTCTTCTACTT--------------------------------TACTATTACTAAATAAATTTTGATTTACAAAGAATGACCCAT-AGAGTCAAATGTCATCTCATACTCAATAGAGTGCTAATTCCTGTTACTAAAATGGT----ATCTT-TCTAAGAAATGTAATGCATAT--GTTGCTTATTATAGGATTTCAATAAAATATTGATGTACTAATACTTTATCCACTT chr4 + 94230402 28124166 28124165 28124475 28124166 28124165 28124475 310 AGCATCATTAATGTTGACTTAAGGTTATCTCTATGCTCCATAACTAGAATACAGAACATT-TCTATTGATTTCTTAGCCACACTCTTCTACTTTACTATCACTAAATGAATTTNNNNNNNNNNTTTACTATCACTAAATGAATTTTGATTCATAAAAGAAAATCCCTGGGAGTCAAATGTCAGCTATTATCCAATATATTGCTCTGTTCTGCTACTAAAATAGTCTGCATCTCATCTTGAAAATATAATGTATATAAGTCTTCTCTGAAAGAATTTCAATAAAATATTGATGTGA-AATACTTTTCTTATTT .:.x......xx:....:.x..xx:...:.x.:.x:::x...:.:....:.x..x..:..-.:.......:.....x.....:..........--------------------------------......:.......:..........:.:...::.x:.:..x.-:.............x..xx..::.....x.x....xxx.:...:.........:..----....:-...x::....:.....:....--..:x::.x.x.x..:.....................:x-........x:::.:.. 60M1D32M32I42M1I56M4I5M1I21M2I38M1D16M 197/270 73.0% 310/94230402 0.0% 42/270 15.6% 105341571 84872984 +3028 chr4 + 190214555 133474368 133474367 133474412 45 TGTCTCAAAAAAAAAAAAAAAACAAAAAAACAAAAAAAACTCTAT chr4 + 94230402 15009843 15009842 15009887 15009843 15009842 15009887 45 TGTCACAAAAAAAAAAAAAAAACAAGAAATCGAAAAAGACTTGAT ....x....................:...x.:.....:...:x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 118464525 71750030 +3007 chr4 + 190214555 133474380 133474379 133474422 43 AAAAAAAAAACAAAAAAACAAAAAAAACTCTATATAACGTTTT chr4 + 94230402 72445056 72445055 72445098 72445056 72445055 72445098 43 AAAAAACAAACAAACAAACAAAAAAAACGCTATATAATGTATT ......x.......x.............x........:..x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 61029324 NA +3016 chr4 + 190214555 133477184 133477183 133477243 60 TATGCACATTATATATATATACATATATATATATATATATAGAGAGAGAGAGAGAAATTT chr4 + 94230402 49681666 49681665 49681725 49681666 49681665 49681725 60 TGTACACATTTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGATTT .:.:......x......x...:....:::.:.:.:.:.x.:x.x...........:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 83795518 NA +3217 chr4 + 190214555 133489046 133489045 133489130 85 AAAGCAAAACAGAAGAAACTAGAAATTTACAGAACAATACATGCTAAGGAAAAAATAAAATATAT-------ATAAAGAGAGTATATTAGTA chr4 + 94230402 57446971 57446970 57447062 57446971 57446970 57447062 92 AAAAAAAAAAAGAAAATTCTAGAAATTTACAGCAATATACATCCTGAAAAAAAAATAGAAGAGGTGACAGGAATATAAAGAATACTTCAATA ...:x....x....:.xx..............x.xx......x..:.::........:..x.x:.-------...x.:...:..:x.:.:.. 65M7I20M 61/85 71.8% 92/94230402 0.0% 7/85 8.2% 76042075 NA +3783 chr4 + 190214555 133496189 133496188 133496265 77 TCTCTGTGTGTGTGTGTGTGTGTATATATATATATGTATACATATATATATGTATACATATATATACATATATATAT chr4 + 94230402 85834539 85834538 85834615 85834539 85834538 85834615 77 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x...x...............:...xx..:..x.:........:..x..::..::x...::.:.....:.:.:.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 47661650 NA +3829 chr4 + 190214555 133496191 133496190 133496269 79 TCTGTGTGTGTGTGTGTGTGTATATATATATATGTATACATATATATATGTATACATATATATACATATATATATACAT chr4 + 94230402 85834539 85834538 85834615 85834539 85834538 85834615 77 TTTGTGTCTGTGTGTGTGTGTGTGTAT-TA-ATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.....x.............:.:...-..-.....x:....:....:.:x......:.x...:..:.:...:.:.... 27M1D2M1D48M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 47661652 NA +3042 chr4 + 190214555 133498065 133498064 133498141 77 GTAGCAAAGGAAAAATAATGGATACATCTGGATATAAATTTTTATGAAACAAGATTTCTTCCTATATTTTAATCTAC chr4 + 94230402 87702474 87702473 87702548 87702474 87702473 87702548 75 GCAGCAAAGAAAGTAGAGTGGATGCAGCTGGACAGAAATGCTCAAGAAGAATTATTTCTTCCTGCA--TCAATTTAC .:.......:..:x.x.:.....:..x.....:.x....x:.:.x...:x.xx..........::.--.:...:... 66M2D9M 53/75 70.7% 75/94230402 0.0% 2/75 2.7% 45795591 NA +30462 chr4 + 190214555 133529316 133529315 133530216 901 GCATGGATA-AACAAATAACAATGTAATTGCAC---AAGGAGACAAAGATTGTTTTTTGGAAAAATGAGATCACTTATGCAATTTAGTTATGCAATTTTC--TATATTCTGAAGAATTACAAGGCATTAAGTCATTAATGGG-----AAGAAAGAACAGTGG-TATTTCTGAGAAGCAGGCATAGAAA-TGCAGAAAATATATGCCTTTGATCTAAATGACAGAAGTAAATTTGCCAATGGCATAATAATATTAGGCATGTTTAAATGAACCTATATTACTTGAAAGGCAGATTCAATATTTTTCAGTTTGAAGAGGCCATTCAATGTCAAGCATAAATGAAATTAAGTTATATACATAATATCTATAATAGAATTTGCTACATTAACGCTTACAGATGTGGGTTAATATTTTATTTGCATACATCACCAAG-TCTGTCCTGTTCTTTGGTTGGATTTATCACATTTCTGCAGACATGGCTTGCTGCTGGAAATGGACATGAACAATCAAATTTTCAGTTTGAAAT-AAGTGAAAGATTCCACTCCAGCTGTATTTGCTAAGCCTTTTGGTAGCTGCAATGATAAGGCAAAAAGAGTTTTGAGAGTGAGAAATCTAAAGTGGAGATGCAAATCTCATGCTCTATTGCTGTATTATTATCTTTGAATATGCTGATCCTGACTAGCCTCAAACTAGCTGTACCAGAACTGAAAAGAAAAGAGGAAGGGGTTATGGTTCTTACTTTGTG---------AACTGCGCTACATCCATTTTTTAGCACATTTTTATTACAGTGAA---ACACAGTTTTATTAATAT--ATATTTAAAGTAGTTTTT------GTTTCATAAACTATTATGAAAAAGCACTCCATTTATATTTCTAGTTGTTGCTCCTTATGCACACAGAGTCACATATCTGTATCATACATT chr4 + 94230402 28141664 28141663 28142561 28141664 28141663 28142561 898 GCATGAAAAGAATAGATAATGACATAGTTGTAAGAAAAAAAAACAGCAATATTTTATTAAAGAGACG----CTTTCACAGAATTAAATTCTGTGATTTTTAGTATTTTCTGAACAATTACAA----TAGAATTAGTACCAGGTTCTTATGAAAGTAATGTATCTGTATCTATAGAGCAGGCATGGAAAATGCTGCAAATACATGCCTTTGATCTAAATGACAGAAATAAATTTGCTAGGGACACGGTAACATTAAGCATATTTAAACTGACCCATATTGCTTGAAGTGCAGGTAGAGTATTCCTCCTTTTGATCAGGCCATTTGATTTAAAGTATAAATGAAATAAAGTTATGTGCATAATATGTGTAATACAGTTTGGCAAGTTAACTCTTACAGATGTAGGTTAATATTTTATTTGCATATATCCCCCAGTTTTTTCCTGTTCTTCAGTTGAATTTATCACAAGCCCGCAGACATGTCTTGCTGCTCAGAGTGGGCAGGAACAATTAAGATTTCAGTCAGAACTCCAGTGAGCACTTTCACTCAGGCTGCATTTGCTAAGCTTTGTGGTAGCTGCATTGATAAGGCAGGGAGAAGTTCAAGTGTGAGAAATCTGAAGTGAAGATGCAAATCTCACGCTTAGCTGGTATTTTGTTATCTGAGAGTACACTGATCCTGAGTGGCATCACAGTAGTTTT----GGGTT-----------AGAGAGTGTTTCTGTTTCTTCTCTTGTGAAAGTGTACAAATGCCTTTGACAGAATTACTACTTCTTTATCATTACTGAGAACTCAAACAAATTTTTTAATGTTGTGATTCGAATTACCATTTCATAAGGTTTTA-AATGTATTTTTAGAAAATGCT-CATTAATATTCAGAGCTTTT-------------CCAAAAAAATAGATCTGCATCTCACACT .....:.x.-..:.:....::.::..:...:.x---..::.:...:x:..xx...x..::.:.:.:.----.x:.:.::x....x.:..x..::.....:--...x.......x........----.x:.:.:.x..x::..-----.x.....x.xx..:x-.:.x...:x::.........:....-...x.x.....:........................:.........:.:x.:..:::...:....:....:......:x:...:.....:......:x....:.xx.:....::..xx.....xx........::..x.x...:...........x.......:.:........x.:.....x.:....x:.x:.....x...........:.....................:...x..x..-.:.x..........::....:..........xx:.:.........x.........x::.:...:..x.......:..:x.......:x...x.-x.....:x:x..:.....x:....:...........:..x...........x..........:::...:x..::..x...........:.....:..............:...:x::..x.:.x..:......xx..:..::..........x.:..x...x.x...:.x.----.:::.-----------..::..x.x..x..x.....x::.....---------..x...x:.xx.:xx.x..x:..x:x.x..x.:.....x.x...---.x...:x...x.....:.--xx...::..x..x:x...------....:.-..xx....x.x.:...:::..-....x.....:xx..:.x..-------------x..:.:xx.:.x.....:...x:...:. 9M1I23M3I31M4D29M2I20M4D16M5I15M1I25M1I243M1I93M1I171M4D5M11D28M9I44M3I18M2I18M6I6M1D21M1D20M13D28M 616/863 71.4% 898/94230402 0.0% 73/863 8.5% 105387652 84826903 +3156 chr4 + 190214555 133535710 133535709 133535801 92 CATGGTGGTTTGAGCCTGTAGTTGCAGCTACTTGGGAAGCTGAGGTGGGAGGATTGCTTCAGCCCAGAAGGTCGAGGCTGCAGGCTACAGTG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::.....--.x:.x.......x..........::.:......x:xx.x.:.x::...x.:........x.:x:.....:..:x:.:::.. 9M2D81M 59/90 65.6% 90/94230402 0.0% 2/90 2.2% 57502513 NA +3056 chr4 + 190214555 133554909 133554908 133554964 56 TGTCTTTAGAAGAATGCATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 25262922 25262921 25262977 25262922 25262921 25262977 56 TGCCTTTGGAAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATA ..:....:...:..x.:.x......:.....x..:.:.....:x..:.:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 108291987 81922568 +3569 chr4 + 190214555 133581520 133581519 133581634 115 TTTCCTCTTTCTTTTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697126 63697125 63697239 63697126 63697125 63697239 114 TCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT .:....:.::xx.x......:.:.:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.......:..::..:.-..........:....:.x.:. 93M1D21M 72/114 63.2% 114/94230402 0.0% 1/114 0.9% 69884394 NA +3634 chr4 + 190214555 133581524 133581523 133581705 182 CTCTTTCTTTTTTTCTTTCTCTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCT---TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTAGGAGAGATGGG chr4 + 94230402 6297089 6297088 6297272 6297089 6297088 6297272 184 CTCTATTATATATTCTGTATCCAAACTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGT-TGTCTTCCTGTCTTTT--TCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCTG-ACAGTAAGAAAATTGGG ....x.:x.x.x....x.x..:xxx:.....:..---....xx:.......x:...x.x.x....:.x..::..xx:.:x......:---.....x.:.......x.-.x....:..x......--..:x.x.xx:.....x:x:.xx:..............x..x:..-.:xx..:..:.:x.... 34M3I50M3I17M1D16M2D44M1D17M 118/178 66.3% 184/94230402 0.0% 10/178 5.6% 127284435 62930120 +3187 chr4 + 190214555 133581565 133581564 133581687 123 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTC--TTCTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTT--TTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 69568146 69568145 69568274 69568146 69568145 69568274 129 TTTGTTTGCCTCTTATCATCCTAATGTCTGTTCCGTTACTACAGTACTTTCCTTGCTGCTCAGTTATTTCCTCCTTT-GTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTG ...x...x::....x::x..:.xx.x...x:.:.x..x:.x.--.x.....:..x:.x..---..x....:.:....-x.:...:....x.....:..:..:x:..:--.:................... 42M2I16M3I14M1D29M2I21M 84/122 68.9% 129/94230402 0.0% 8/122 6.6% 64013419 NA +3829 chr4 + 190214555 133581568 133581567 133581684 117 CTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx.x.:....::...:..:..:x..::.:.x....xx.....x.:.:------..x.....::x.xx...:.....::.:.:....:...:..::.....x... 66M6I51M 75/117 64.1% 123/94230402 0.0% 6/117 5.1% 69884451 NA +3146 chr4 + 190214555 133581636 133581635 133581693 58 TCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTT------------------TTTTTTTTTTGTATTTT chr4 + 94230402 6554016 6554015 6554091 6554016 6554015 6554091 76 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACTGAAGTTCCCTTTTTGTGTTTT .:.x..x..............:...:...............------------------..:::.......:.... 41M18I17M 49/58 84.5% 76/94230402 0.0% 18/58 31.0% 127027620 63186935 +3006 chr4 + 190214555 133581657 133581656 133581706 50 TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTAGGAGAGATGGGG chr4 + 94230402 5704515 5704514 5704564 5704515 5704514 5704564 50 TTGTTTTTTGTTGTTTTTTTTTTTTCTTTTGTAGATCAGAAGAGAGGGGG ..x......x..x............:.......xx.:..:.....x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 127877142 62337413 +9051 chr4 + 190214555 133595240 133595239 133595664 425 ATTTTAATAAACAAGATGTTTAATAATTTAAGTTTGTATTATTTCTATTATATAATTTTTGTTACTGGC---GCAACTCAATTTGGTTC-------AGATACCATCTCATAACTTCTCCATAACATGCTTCTTTAAAAGAAAATACAAATTTTATAAAGCACTCAGTTGTATGGGTGCACAAATGGAAAATGTCTCTGATCAAAATTAATTCAGTTGCATAACAGCCAATTTGTAACTAGGA-----CAATAACTGCTGACACTGGGTTTGGATGGGAAATAATTTATCAGATAAAAACTAGAGGTCATGGTGCATTTAAGACAGCTATTTACAGAGCTGAATTTTCTTGCAAAATAATTTAGCTAGGACTTCTGAAGCAATTAATTTATTAAAGGCTGCCATTTATCAGACTAAACCAGACATTTCTATTTCCTTCAAA chr4 + 94230402 28159778 28159777 28160178 28159778 28159777 28160178 401 ATTTTTCTAGACCAGACATTTAGATGATGA-----GCATTGTTCCCTTTCACTAAGCTTTTTTAATATCATAGAAAGTCAAGTATGTTCCTACTGTAAATACTGTAT-ATCTCTTTTTTA-AACATGATTTTTT----------------TTTACAG-GAACCCTTTTGGGTGGCAATACAAATGCAAAATACTTAGGATCCAAATTAATTCTGAAGTAGAAAATCCTACTTGGAACTTTGTGCAATAAATAACTGCTGACTGTGGGTTTTGATGGAATGTAATTTATCATAT-AAAACTATGGGTCATGAAACATTTAAGGCATCTACTTCCAATACTGAGTTTTATTGTAAAA-------------ACTGTT-AATTGATTAATTAATTACAGGCCATCGTTTATCATCCTAATGCAAAGCTTTTTTTTCTCTTCTAA .....xx..:..x...::....:xx:x.x.-----.:...:..:.:x..xxx...x:...x...x.:x.---.x..x....x.xx....-------.:....::.x.-..xx...:.::.-......x..:...----------------....:.:-.x..:.xx...x:...xx::.......x.....:::.xx....x..........x.xx.:.x..x.x..x.:...x....xx.x-----x.............xx.......x.....:.x:..........x..-.......x:.......:x:........:..x...:..x..:x:....:....x...:....-------------...x:.-..x::.......x....x....:::.:.......xx....xx..:.xx...:.x..::....x.. 30M5D34M3I17M7I11M1D12M1D13M16D7M1D84M5I46M1D61M13D6M1D65M 266/386 68.9% 401/94230402 0.0% 54/386 14.0% 105435462 84779093 +3172 chr4 + 190214555 133611224 133611223 133611365 142 AAATTGTGGATTTGATTGATTAAAAATATATGGCAATGCTTTAATATTTTTAAATATTGA-ATCCCTAACTAATTAATTTATTTTGGAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACGGAGTCTCGCTCTGT chr4 + 94230402 7575745 7575744 7575886 7575745 7575744 7575886 142 AAAGTGTGCACTTGACTGTTTTGTTTACAATGGAAGTTATTTCCTTTTGTTAAATGTTGCCATCTACAGCTATTTG-TTTACATAGAAAAGACTTTCTTTTTTTTTTTTTTTCCTCCTAGAAATACCAGGAACTTTGCTCTGT ...x....x.:....:..x..x:xxxxxx....x.:.xx...xx.x..x......:...x-...:x:.:...x..:-....:x.x.:.....x...:...............::.::.xxxxx..xxx...:::.:....... 60M1I15M1D66M 90/141 63.8% 142/94230402 0.0% 2/141 1.4% 126035479 64179076 +11125 chr4 + 190214555 133623156 133623155 133623653 498 AACTGCTGACATGCAAGTGCACTTTAAATT--GTTAGCATTTCTGGCTATACTTAACACATTTTGAAGGAGAGAGTTTAACGCAGGTTGGATGGTATGCCAGGTGTATACTGTCACTTAAAACGGGACAGTGGGTAGTCTTGAGACAAATAGCATTAAAGTGAACTCAATGCCAAAAGCAGCTGTTTGAAATAGATCTGGCAGCACTTCAGAGGTGTGTATCTTGGTGTGAGACTACCAGTCATCTCTTTT--AACTTGCCAATTTTACTGATAACATAAAAGCAACAAAATAAACTTTGAATTTTTAATTCTTTTTGAATCTCTGTGTGTGTGTGTTT----CTTATAGCTTCCTG-AAAGGTAAAGAATGATCAGTC--ATTAATATTTTAGTGAGTGACAAAAAGCATTG------TTAAAGAAAAAAA---AAATTTCATGAGTTCCACAGGTAACAAAAGATAGCACAATTATTGTCAGATACTGTGTAATTAAATATGTATTTATACTATTC chr4 + 94230402 28186250 28186249 28186747 28186250 28186249 28186747 498 AACCACTGGCATGTATTTGCATTTTGCATCTGATCAGCAGATTTCAATGTAATTA-TGTATTTTGCAGGTGAGATGTTAATGCGGGTTATATAGCACATCAGCTGTGTGCTGCTACTTGAAATGGTCCACTGGAAAATCTTGAGACAAACAACATTCAATTAGGCGCACAGCCATGAACAGCTGTGCTAAGTACCACTGGCATCGCCTCAGACACACAATTCTCAGTGTGAGCCTACTGCTAGCCACTTTGAAAATGTGTTTATGTTGGGGACAA-----------------AAACTTTCCATCATCAATTCTTCTTAAATGTCTGTGCCTCTTAGCTGAAAAATTACAGCTTTTTGCAAGGGGAAGGGATGCTCAGTCCTATTAAT-TTTCATTGGATGA-AAAGGATATTTTTTTCCTTCAGGCTAAAGGTTTAACCTTTATGAGTTTCATGAGTAACAAAGGGCATCCAGATTTTTATTACATGGTGTAGAGCTGTGCATTTGTTCAAAATAATC ...::...:....:.xx....:...:x..:--:.:....xx.:.x:x.:..x...-:::......x...x....xx....:..:....:x..:.:.:::...x...:.:...::....:...:..xx..x...:x.:............:.:....x..x.:::.x..xx....x:.:.......x:x..:..xxx......x.:.:.....x:::::xx...::.......x....::x.x::.x....x--..:x..::x..x..:xx..:..-----------------.......xx..:x.:.......:..:...x......:x.x.xx.:.x----x...:.....::..-..:..x..:.:...x......--......-...:.x..::...-...::::...x------..x.:.xx...::---..x:..:.......:..:::........:.::.x.xx:...x..:.:.x..:x...:x.::.:x::..x.:..:.x.x..x.. 30M2I23M1D195M2I22M17D47M4I14M1I21M2I6M1D13M1D11M6I13M3I83M 304/478 63.6% 498/94230402 0.0% 40/478 8.4% 105436906 84777649 +3479 chr4 + 190214555 133630231 133630230 133630289 59 GCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:x....:.:...........::........x.xx.x...x...........:.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 57597025 NA +3023 chr4 + 190214555 133634432 133634431 133634499 68 CTTAAGCAATGATTTAATGTTGTTTATATAAGATGGATAAAGATTGTGAACAAATATTATGGAGAGAA chr4 + 94230402 31822565 31822564 31822632 31822565 31822564 31822632 68 CTTCAGTCATGGTTTAATACTGTTTACAAGAAAAGGAGAGGAATGGTCAACATATGTTGTGGAAAGAA ...x..:x...:......::......:.x:.:.x...x.:::..x..x....x..:..:....:.... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 101811867 88402688 +3204 chr4 + 190214555 133637009 133637008 133637055 47 TGGTTATATATATATACACACACACATACACAGACACATGCACTAGA chr4 + 94230402 43671851 43671850 43671897 43671851 43671850 43671897 47 TGTCTATACATGTATACACATGCACACACACAAACACATGCACTAAA ..x:....:..:........::....:.....:............:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 89965158 NA +16773 chr4 + 190214555 133638701 133638700 133639160 460 TGCTAAATATTTTGTA-------TTAAAGAAAACATGTAATATTCTTTTACGTACTTGTATAATCTCCT--ATTATCTACATGAAAAACAAGAAACTTTGAGA------------------GGGTGATTATCTATGCCATAGCCTTGCTGTCATTGTTTGATTCTGCCTACATTCTCCTGTACCCGCAGGTATAGCCTTAGC-ATTGAAACACTGATGCTGTATGAAAAGTG-AAAGAACACAGAAAGGTTTCCTAGCAACTCCTGGGAGT-CTTCTAAACTAAGTCAGTTAAAACCATATAGTACGTGCAATAGGTGTAAAGTAGAGTGCAAAGCT----------------------------------CAAT------TGTAATAGGAGCCAAATTGCTCAAGAAAGAAATCTCATCAGAACCTTGGTGGTTTAACCATTATTTAAATAATCCTGCTGGAATTCCACTGAAAATGTAG-----AAGTCCAAGTACCAGAACCAAAGTGGCAGAGTGCAACATGAGAGTTAAT chr4 + 94230402 28191864 28191863 28192388 28191864 28191863 28192388 525 TGCAGAGTATCTTCTAAAAATATTCATGGAAAATGTGCTATGTCCTTTCTTTCGCTC---TAATCCTCTGTATTACCTGTACAAAGAACAAGGA--TTTGTGCCTCCCCCACCTTTTCTTTTTCTGCTTATCTGTGCTGCAGTCCCACTGTCATTGTTTGATTCTGCTTAAATCCCTCTGTACCTAAAGGTACAGCCTTATCAATTGAAAAGCTAATGCTATATAAGAAGTGAAAAGAACACAGAAAGGTTTCCTAGCAACTACTGTGAATCCTTCTAACGTAAGTCAGTTAAAACCATGTAGTACGTGCAATGAGTGTAAATTAGGGAACTAAGCTGATCCACAGATTTACAGATGCCCACTATAAAGTATAATAAAACCTGCAATAGAAGGTGAATTGCTCAAGAAGAAAATCACATCACAGTCTTGACAGCTTTATCATTATTTAAATGATCCAGTTTAAATTCTTCT----ATGTAGTTAGTAAGACTGAGTGTCAGAGCTCCAGCGACGGTATACAA-AGCACAGTTAAT ...x:.:...:..x..-------.:.x:.....::..:x..:.:....:x:x::..:---.....::..--....:..::.::..:......:.--....x.x------------------xxx..x......:...:::..:.:::....................:..x..:.::.......::x.....:.......x.-.......x:..:.....:...:.:.....-.............................x...x..:.-.......xx..................:.............::.......x...:.x:.x.....----------------------------------:...------..:.....:..x::.............::.....x.....x.::....:::.:..x.:............:....x.:.x:.....:x..----......-----...x.::...::....:.:xx..:.:.:.x:.:...-.xx.x....... 16M7I34M3D9M2I23M2D7M18I81M1I29M1I38M1I65M34I4M6I90M4D6M5I36M1D12M 334/450 74.2% 525/94230402 0.0% 85/450 18.9% 105446837 84767718 +3410 chr4 + 190214555 133661680 133661679 133661762 83 CATGGTAGCACAAGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..:.::..x.--......:...........::........x.xx.x...x.:........x:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 57628483 NA +3087 chr4 + 190214555 133703411 133703410 133703473 63 AAAAAAGTATCTATATATAGATATATATATCTATATACATAGATATATATAGTATATATGTCT chr4 + 94230402 74404237 74404236 74404299 74404237 74404236 74404299 63 AGAAGGGTATATATATATAGATATATGCATTCACATACAAAGATAAAAAGAAAATATGTGACT .:..::....x...............::..::.:.....x.....x.x.x.:x....:..x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 59299174 NA +11709 chr4 + 190214555 133704602 133704601 133704998 397 AATGATTCAACTGTTTCATACCAAAAACTATTCTT-TTCTTTTTGGTACATAGTAACATTTTA----TTATGTTATGTGTGCATTTTTATTAAATAT-TCTGAAACATAATT-----ATCATCATTCACTTTGGTGATGTCAATATTGAACAATAATAAGAATGTAATGGGCTGTATTAAGAAGCCTATTATAAGCCCTCATGTATTATAATCTCTATTGTGACTTGATATCCATAAGTGTGGTTAGATTGTTTATGAAGAGTAAATAGCTAAGTAGTACTAAGTTTGTAACCTCGGAGATAAAAGTGATTATGTATGAGAAATAAGTAATTGAACATGAAACACACTGGTGGTTGCTGCTTTTTAGCTCCTTAGAAATGATTGCAAGTCCATTAGGTTCTGTAAGGC chr4 + 94230402 28217230 28217229 28217614 28217230 28217229 28217614 385 AACGGTTTGACAGTATCATTTTTGAAACTATTTACATTCCTGACACTGCataataaaatttttatttttttCTTTTGTG-ACTTTTTTATTGCTCACGTTTGAAACATCATTTTTTTATTATCTTTCAGTCCTGT--TATCAATTGTGAGCAATAAGATGACTGTAATGACCAGTTTTAATAAGGCTATTACAGGTTCCTATGT----------------TGAACTGATGTACATAAGTGTAGTAAAATGGTTTATGAGGAGTAAACAGCTGAGTGATATCACATTCATATCCTTGGAGAT-GAAGTGATTGTATATGAGAAATAAATAATTGAACAAGACATAGTTGGGTGGTTTCAGTTTCTAAACTA---AGTAACAGCTATGAGTCTGTTGGACGCTGCAGGGC ..:.:..::..x..x....x::x:........:x:-...:.xx::x.:....:...x.....x----..x.x..x....-:.x........:xx:.:-.:........x...-----..:...x....x.::x..--.:.....xx...:......x.x..x.......:x.x..x....x...x......:.:.::.::....----------------...x:....:.x.........:..x.:..x........:.......:....:...::..::.x:..::..x...:......-:........:.:............:..........x..x.:.xx:x.......x.x.:..:.x.:..x---..x..::::.:::....::..:.::x...:.:... 35M1I27M4I12M1D17M1I14M5I18M2D67M16D81M1D68M3D35M 258/374 69.0% 385/94230402 0.0% 34/374 9.1% 105487372 84727183 +3039 chr4 + 190214555 133709049 133709048 133709099 51 TTTCTCCTTTTTTATCCCTTCTTTTTTTATCTTCCTTCCTTCTTTTCCTCT chr4 + 94230402 11806867 11806866 11806917 11806867 11806866 11806917 51 TTTATCTTTTGTCATTCCTTCTTTTTTTTTTTTCCCTCCTTCTTTATTTCT ...x..:...x.:..:............x.:....:.........x::... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 121902182 68312373 +3059 chr4 + 190214555 133709243 133709242 133709286 44 TTCCTTTCTTCCTTCCTTCCTTCCTTCTCCCTCCCTCCCTCCTT chr4 + 94230402 49829864 49829863 49829907 49829864 49829863 49829907 44 TTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT ..:.......::..:....:.........:.:...:......:. 44M 35/44 79.5% 44/94230402 0.0% 0/44 0.0% 83879379 NA +3546 chr4 + 190214555 133709277 133709276 133709536 260 CTCCCTCCTTTCCCTTCCCTTCTCTT--CCCCTTCTCCTTCCCCTTCCCCTTTCTTTCCTTCTCTTCTTCTCTCCTTCTTTCTCTCTTTCCCTATTTCCCTCTTTCCCTCTTTCTCTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTC---TTTCTCTCTCTCTCTCTCTCTCTT---TCTTTCTTTCTTTCTTTCCTG chr4 + 94230402 19215300 19215299 19215567 19215300 19215299 19215567 268 CTCAGTTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCTG ...xx.:..:.x......::...x..--:xxx..:.:x..::x:..:.::x..xx..x:xxx.x...:x..:..x.::...xx.x:x...:.:x.xx.x.:.x:xx..:.:::...:.:::...:..:...:...:..xx..::xx:xx......x..::...x......xxx:...x.x.::.:.xx::.:.:...x......:.x:.x.:....x---:......:xx::.:.:...x:...---.:.....x..:.::x.::... 26M2I189M3I24M3I21M 142/260 54.6% 268/94230402 0.0% 8/260 3.1% 114493977 75720578 +3024 chr4 + 190214555 133709337 133709336 133709406 70 TCTTCTTCTCTCCTTCTTTCTCTCTTTCCCTATTTCCCTCTTTCCCTCTTTCTCTCTTTCCCTTTCTTTC chr4 + 94230402 20861472 20861471 20861541 20861472 20861471 20861541 70 TCCTCTTGTCATCTTTTTCCCTTCTCTCCCTTTTTCCCTCCTTCCTGTCTTCTAATTTTTATCTGCTTTC ..:....x..x:...:..:.::...:.....x........:....:x::....xx:...:x::.x..... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 112847865 77366690 +3715 chr4 + 190214555 133709345 133709344 133709524 180 TCTCCTTCTTTCTCTCTTTCCCTATTTCCCTCTTTCCCTCTTTCTCTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCT----------TTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTT chr4 + 94230402 8009578 8009577 8009765 8009578 8009577 8009765 188 TCTCTTTTTTTTTCTCTTTCTTAACCTATTGTAACCCCTTTTTCTGTTATTCCCTTCATTACCTCCTTCATTGTATTCTTCAGTTAAACCCTTTCTACTATAAGAGTTTCTCATTTCTCATCCTTTATTCCTTCCATGCTCTTATTATTC-------CAGTCTTTCCCCTAATATACTCACCCATTTCTTTCTTT ....:..:...:........::x.::.x::x:xx:....:.....x.:x.......:x..x.:.:...:x..x:x.....:xx..-----......----------..::.:x......x::....x..:...:.x.x..:.:x..x...-------.xx......:.::xx.x.x:::x:.:x........... 85M5I6M10I44M7D38M 108/173 62.4% 188/94230402 0.0% 22/173 12.7% 125699767 64514788 +3782 chr4 + 190214555 133709384 133709383 133709504 121 CTTTCTCTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCT----CTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTT-TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT ....x.::..:...:..:.xx.x...-.:.....:....:.:x..::.:.x....xx.....x...----.::..x....:.:x.xx.......:..::..:.-..........:..:.:.x.:. 26M1D39M4I33M1D21M 81/119 68.1% 123/94230402 0.0% 6/119 5.0% 70012267 NA +3010 chr4 + 190214555 133709435 133709434 133709534 100 TTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCC chr4 + 94230402 30531212 30531211 30531311 30531212 30531211 30531311 100 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTCC .:.x.....:...:......x:xx.:.:..x.:.:x.:...:.x.:x.xxx.:..x..x::x:.x.:x::.:....x.....:..:...:.......... 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 103178223 87036332 +3261 chr4 + 190214555 133709435 133709434 133709524 90 TTTCTTTCTTTCTCTCTCTTTCTTTC---TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTT chr4 + 94230402 49829835 49829834 49829927 49829835 49829834 49829927 93 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTT ..:.x..:.:.x.xx..:x..:..x.---...........:...........:....:..:::.:.:...:...x.x.x.x.x:.:.x.:... 26M3I64M 61/90 67.8% 93/94230402 0.0% 3/90 3.3% 83879600 NA +3020 chr4 + 190214555 133709444 133709443 133709514 71 TTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 28615946 28615945 28616016 28615946 28615945 28616016 71 TTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT ....:......::...::.:....x:...x:.:x..x....x.x...::.x.......:..:.:..::.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 105093498 85121057 +3681 chr4 + 190214555 133709730 133709729 133709825 96 TAAAGAAATTTTGTTACATATATACATATGTATATG-TGTGTGTGTGTGTGTATACACACACATATATATATATATACACTTATATATATATAGAAA chr4 + 94230402 6083137 6083136 6083231 6083137 6083136 6083231 95 TGATGTAGTGTTGATATATGCTTCTCCCTATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATAT--TCTTACATGTAAAAAAAAA .:.x.x.:.x...x..:..::x.x:x:x.:......-............:.:.......x................--x....:..:..x.x.:... 36M1I39M2D19M 69/94 73.4% 95/94230402 0.0% 3/94 3.2% 127626593 62587962 +3368 chr4 + 190214555 133709750 133709749 133709828 79 TATACATATGTATATGTGTGTGTGTGTGTGTAT--ACACACACATATATATATATATACACTTATATATATATAGAAATAC chr4 + 94230402 85834533 85834532 85834613 85834533 85834532 85834613 81 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC ...x...x...:.x...................--.:::.x:....:....:..x.....:x.x...::.:.:.x.x.:.. 33M2I46M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 47875217 NA +3203 chr4 + 190214555 133709763 133709762 133709825 63 ATGTGTGTGTGTGTGTGTATACACACACATATATATATATATACACTTATATATATATAGAAA chr4 + 94230402 68837093 68837092 68837155 68837093 68837092 68837155 63 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCAGAA .:.....:..........:........x...:...:...:.:.::.x:.:..x.x...x::.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 64872670 NA +29538 chr4 + 190214555 133713452 133713451 133714364 913 AAGGTCTTTCTTTAATGGCAAACAGCTTTTACTAACTTCTTGTGATTCCAGAAATGCTAATCAGCAGTTCTAGTCGGCAGCACATTTATTACACCATGACATGCTGAAGACAGTCAGTTACAAATAGAACTGCCTCTTGAAAAATGCTGCTCCAGTGTTTTATAATAAAGTGCACCAATTAGATGCATTCATTAGGACAAACTGCTTGTCTTTTTCCATATTAGGGCTTTTAAAAAGGCACACTGTATTTCATAGTTCACTCTATTCTATATTATTATTAATTGAACAGGGCACA-TACAGAGTTTTAATCCAATAAATGTAAATACATAATGAGTATTGTTTCCTTCGTGACTGTCAGATCTACAAGAGCTCACT-----GTGTTTCATATCC-----AAGATACATAATGTGGAACAAGTCACT-TTCTTTTTCAATGTTTTTCT-----GTATATTTGAGAAACCATTGCAATAAGCAACA--ACATTGGCTG-ATAATTTAAAGTTGTCACTTTATTTAAGAATTGATTAGAAGTCTCCTCTAAAATA---TATTCAAATTTTATTCAGAATAAAGATTCATAACCTTACACATATACACACATATATGTTGCCTTATAAA--CTTAACTTTCTCACATAACTTTATAGCTTGATATTA-------AAAAACTCCTGGGGGTAAC----TATTTCTAAAGGGAAAATG--AAGTAATAAATGTGGAATATAGTCAATAATCTGTCTTTTTCAGGGTGAGAGGGAATGGGATTATTATACAACGCTGTGAATAGAATAGAACAAGTTG-GTAGGGCTGCTTTTTCTGATGGCAAGAACATTATTTCTCAGTTTTCTTCTTGTACACAAAAACATGTAGTAGCTAGAAATACCCAGTTCTTCTC--TAGAATGGATATAATTTGCATTAGGATGCTGACCTGAATTATAACT chr4 + 94230402 28222321 28222320 28223247 28222321 28222320 28223247 927 AAGGTCTCCTTGTAACAGCTAACAACTTCCACTAGCTTCCTGGGGCTCCAGAAATGCTAGTCAGCAGCTCTAGTCTGCAGCACATTTATTACTCTCTGACGTGCTGAAGACAGCCTGTTACAAATAGAACTGCCTAGTGAAAAATGCTGTTCCAGTGTTTTATAATAAAGTGCACCAATTAGATGCATTCATTAGGACAAACTGCTTGTCTTTTCTTATATTAGATCTTTT-AAAAGGCACAATGCATTTCATAGCTCATTCTTCTCTGTATTATTATTAATTGAACAGAGCACATTACAAAGTTTTAATCCAATAACTGTAAATACATAATGAATAATATTTCCTTGGAGGCTATCGGGGTTGCAGCAATTTCCTCTACAGCTCTGCATACTCAGAGTAAGATGTATGAT---CATAAAGTTGCTCTTCCCTTTCCATAGGTTCCCCACAGGTACATCAGGGACACCTCAGGGGCAAGGAATATTGCACGTGCAGTAAAAGACAAAAGTATTA-TTTGTTAAAAAGCAAATTAGGAGCCAAAGTTAAAATGAGCCTTTCCATTTTTTTTCTTGTTGAAA----AGGGTCCCACGCACTAGTTC---TTCATGTTGTCTTGCAGATCCCTGGATGCCAAAAGGGAAACAATGTTTTAATTTTAGCAGCATGAGGATTCCTAACTGCAGCATATTATTTATAAAGGGCAAATGGCAAACACTAAATGAAGACAAAAGGAAACATTCTGCTCCTCTCAAGGGGAGAGCAAC----ATTATTGTACAAGGTTGTG-ATTGAGCATACTAAGATGAATTGAGCTGCTGTTTCTACTGACAAGCACATTACTTTTTGGATTCCTATGTATGCATGAAAG--------AGCTTGCACTCCCCAATTATGCTTAATGAAACGAATATGATCTACATCAGAAGG--ACCCTAATTCAAAACT .......:::.x...::..x....:...::....:....:..x.::.............:.......:.......x................x.:x....:............:.x...................xx............:................................................................:::.......:x.....-..........x..:.........:...:...x:...:....................:.....-....:................x................:..x.:.......x.x.:..:..:.:x:.:..:x.::.:x..-----.:x:.x....::.-----.....::..:..---x.xx....::..-...::....x..:xx..:.:-----...:..:x.:..x...x:x.x:::...x..:.--:..:xx..x.-.x..xx:...:x.:.:.-...:..x..:.::x:.....:..:.xxxx:......:---:x...x.x....x...xx:x.:..:----.x:::.::..:..:xx::x.---.x:......:...::.:.--.:.::x.x:.xx.x:x:.xx:x..:x:..:..x...-------:.::.:....::xx.:.:.----.....x.......x.....--..::.x......x:..xx.x..xx..:.x....::::.:...:..x.....x:.x----......:.....x.:....-..x..::.x.x:...x..-:.x.:......x.....:x..:....x......:..:.::.x..:..x:x.:.:..::...:--------....x.x.x.x....:..x.x..:--.::..:.:....:..:.:...:..:.x.--:x...:.x.:.x.... 231M1D63M1I80M5I13M5I12M3D12M1I20M5I32M2I10M1I17M1D37M3I25M4D20M3D18M2I36M7I19M4I19M2I55M4D19M1D18M1I62M8D24M2I28M2D16M 621/886 70.1% 927/94230402 0.0% 68/886 7.7% 105491131 84723424 +3186 chr4 + 190214555 133750216 133750215 133750294 79 TATATAAATGTGTACTATATATATACATATATACACACACACACACATATATATATATCATTATATAAAGACAATGAGA chr4 + 94230402 74671061 74671060 74671133 74671061 74671060 74671133 73 TATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGC------TAAAAAAAATTAAA ....:...x:.xx:..:........:.....................x.x.x.x...x.------....:.x...x.:. 59M6D14M 56/73 76.7% 73/94230402 0.0% 6/73 8.2% 59079155 NA +3124 chr4 + 190214555 133750222 133750221 133750260 39 AATGTGTACTATATATATACATATATACACACACACACA chr4 + 94230402 30834198 30834197 30834236 30834198 30834197 30834236 39 AATATGTATTATATATATATATATACACACACACACACA ...:....:..........:.....:............. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 102916024 87298531 +3032 chr4 + 190214555 133750227 133750226 133750281 55 GTACTATATATATACATATATACACACACACACACATATATATATATCATTATAT chr4 + 94230402 48114998 48114997 48115052 48114998 48114997 48115052 55 GTACCATTTATATATATGTATAAACACCCACACACCTGTCTCCATATCCTTATAT ....:..x......:..:....x....x.......x.:.x.x:.....x...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 85635229 NA +3352 chr4 + 190214555 133763584 133763583 133763679 96 TGGCACATGCCTGTAGTCACAACTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAGTGAGCAGAGATGGTGCCA chr4 + 94230402 76033202 76033201 76033289 76033202 76033201 76033289 88 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::..:.--......:x..:.....:.::........x.xx.x...x.:..............x:xx:..:..:..------:.x...:..... 9M2D67M6D12M 63/88 71.6% 88/94230402 0.0% 8/88 9.1% 57730382 NA +3059 chr4 + 190214555 133766592 133766591 133766666 75 GTATTTATAAGATTTTAGAAAAAAAGAAAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAA chr4 + 94230402 62475699 62475698 62475773 62475699 62475698 62475773 75 GTATTTCTCTCATTCAAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAA ......x.xxx...:x.:.::....:....:.:::.:...x..:.............:.x....:::x:::.... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 71290893 NA +4026 chr4 + 190214555 133766652 133766651 133766894 243 AAAGAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGGGAGGA-AGAGAGATAGAGAGGGAGAGTGGGAGGGAGGGAAAGAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAG-GAAGAAAGAAAGAAAAGAAAGAAAGTAGTAAAAGA-------GAAAAAGAAAGGCAGTGACGTGGTAGGCAGATAATGTTCTGCCCCAAGTTACCCTTGTCCTAATCCCCAGATTCTGTGAATG--TGCCTGTCTTATAT chr4 + 94230402 49044652 49044651 49044884 49044652 49044651 49044884 233 AAAAGATTAAAGAGAAAAGAAT--AAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAA----------GCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA-GCAATAAGCATAAATCCCTATGC-----GTTTCCCTCATC---ACTCAGAAATTCAGAGAATTCCTACCTTTCCAATAT ...::.xx.....:.......x--....:.xx.:...x..x-...:...:.::x..x....:----------.x.xx:..x:..:....:.:..:xx..........::..:.-...:..x................x.x..:.:..:.-------x.::....::.:x.:...-.:::..:...x.x.x:x:.x...-----...x....::..---.::.xx.:....x.x....x--.:...x..:x.... 22M2D17M1I20M10D41M1I35M7I18M1D23M5D12M3D20M2I14M 147/222 66.2% 233/94230402 0.0% 32/222 14.4% 84722000 NA +3155 chr4 + 190214555 133768863 133768862 133768947 85 AAGCATATATATATGTGTATGCATATATATATGTGTATATATATATACACACACAATATATGTATATATATACACACACATATGC chr4 + 94230402 73816990 73816989 73817067 73816990 73816989 73817067 78 AACCACATATACA-------ACACATGTCCACATTTATGTATAGCGAGTCACACTATTCATGTATATATATACACACACACATGC ..x..:.....:.-------:..:..:.x:.::.x...:....xxx.xx.....x..x:.....................:.... 13M7D65M 57/78 73.1% 78/94230402 0.0% 7/78 9.0% 59951873 NA +3222 chr4 + 190214555 133785626 133785625 133785694 69 AAGGAAAGAAAGAGAAAGAGAGAAGAAGAGAAAGAGAGAGAAAGAAGGAAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 66803525 66803524 66803593 66803525 66803524 66803593 69 AAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAA ...x.:.......:...:.:.........:....:::.:.x.:x.:.x..:..:....x.:..x.x... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 66982101 NA +3714 chr4 + 190214555 133785642 133785641 133785788 147 AGAGAGAAGAAGAGAAAGAGAGAGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGGGAAAGAAAGCAAGCTACAAGAAGAAAGGGAGGG----AGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGA--GAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAG-----------CATGAAGGAAGGGAGCGTGCCGGGGAGG ...:........xx.x.........:...--........x.:..:xxx....xx:..:x::.:x.x.:..::x..:...:...:..:.....:..::..x..x.xxxx:...-----------..x....:.......x.----:...... 29M2D81M11D17M4I7M 91/134 67.9% 138/94230402 0.0% 17/134 12.7% 82637263 NA +3472 chr4 + 190214555 133785645 133785644 133785733 89 GAGAAGAAGAGAAAGAGAGAGA--AAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAGAAA----GAAAGAGAAAGAAAGAAAA chr4 + 94230402 58935720 58935719 58935814 58935720 58935719 58935814 95 GGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA .:...x:...::..:.x..x..--...:.::..x...::::..:....:x.......x....:.........----.x...:....:.:..:... 22M2I48M4I19M 63/89 70.8% 95/94230402 0.0% 6/89 6.7% 74849925 NA +3424 chr4 + 190214555 133785703 133785702 133785822 120 AGAAAGAAGAA-------AGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGGGAAAGAAAGCAAGCTACAAGAAGAAAGGGAGGGAGGGAGGAAAGAAGAAAGGGAGG-----------GAGGGAGGAAGGGAGGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATG--------------GAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ...........-------...:.....:.........x....:xxx....xx.:..x.--------------...x.x:.:.:.x...:..::...:.:....:.....-----------..:.x.x.....:..... 11M7I40M14D37M11I18M 79/106 74.5% 124/94230402 0.0% 32/106 30.2% 82637324 NA +3095 chr4 + 190214555 133785786 133785785 133785856 71 AGGAAAGAAGAAAGGGAGGGAGGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 94029714 94029713 94029784 94029714 94029713 94029784 71 AGGAGTGAAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAA ....:x...:.:....:...:....::x.::..:.:.:.....:....:.....x...xx:x.x..x.... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 39756072 NA +3031 chr4 + 190214555 133785791 133785790 133785852 62 AGAAGAAAGGGAGGGAGGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAAGAAAA chr4 + 94230402 39003022 39003021 39003083 39003022 39003021 39003083 62 AGAAAGAAAGGGAGGAGAATGGAGGGGGGGGAAGGAAAAAAAGGAAGACCGAACATAGGAAA ....::..:..::....::x...:...:..........:....:..:.xx:..x.x..:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 94782769 NA +7751 chr4 + 190214555 133790621 133790620 133790885 265 CTGTCTATATTCTTAGTAGATATGCTATACTAGTAATGAACAC--------AATCTGAAATATGATTTTTTTGTTTATTCTGCTGACATTTAATGTAATAAAATTTTCATCT---AACCAGTATTCAAAACTGTTAAGTCTATACGAAATATGTCTGCCCTCAGCTTTGCCAGAGGCAGAATGTACTTTTATTGATAGATTGAGCATTATGCTTTCTTCTGAA---------ATTCCCTATTCATGGCTTATTCA-AGTGTTCTTTCATTTTGTTCAAAGTACTCT chr4 + 94230402 28244149 28244148 28244431 28244149 28244148 28244431 283 CTGTCCTAACACTTAA-AAATATACCTCGCTTGTAGTAAACAATGATGAAAAATCACTAAAGCAATCCTTTTGTTCACTGTGGTGACATTTCCTCTAATTAAATTTTCATCTCTGAA--GGTATTTGGGCCTCTCTGGTCCATCTGGGATATGTTTGCCCTCAGCATTGCCTCAGGCCAAATGTATTTTTGTTGATATGCTGCACAGCATGCTGTCCTCGGTGGCTGTGGTTATTCCCCACTGGTGGTTTATTTAGAAGATTATTTCACCAGTTTCAAAGTACTTT .....:xx.:x....:-.:....:.:x::..x...:.:....x--------....xxx..x:::..::.......:.:.x..x........xx.x....x............---..--:.....::::x..x.:x:...:..x:.::......:..........x.....xx....x:......:....:......x::..x:..x:.....x..:..x.x:---------......:.:.x:...:.....:.-.:x:..x.....::xxx...........:. 16M1D26M8I61M3I2M2D104M9I23M1I30M 178/262 67.9% 283/94230402 0.0% 24/262 9.2% 105546472 84668083 +19534 chr4 + 190214555 133799661 133799660 133800378 718 CAGTGCATAATTTTAACAC--------AGAAAGTGGCTTTACAGCCTGG-TATTCCAAGAATGCTTTGGTATAAAAATC-ATTATCTTGGCTGACAGTTTTACCAGATCTTCTAATAAGGATCTTCTTCACTTGCCCTAACAGGCCACTTTC--GTTTCCCAAGAACTTTCTTTTAGAG---ACTCTTGAATGTGTATCTGCCTTGAAAGGATGGCCTATCCACATTGCCACTTTCTCCTTTTATGTTCAATATTTAGAATTCAGCTCAGGTCCAAACCAAAGAAGCAATTCTACCTCACAAGTGCTGCAGCTGGTTTTCTCCAGTGCTACTCC-ATTCATAGCAAAGGAAGGAGTGGCAGACCCATGCAAGATTAGTTTAAAACAAAAATTAATACTGCTTCCTCA--TCCCATAAACTC-TTGAGCTAGACT-------CTCCAGGGACAAAAGAGGAAAGACTCAAACAGACAAAACTTGGTTACCACTGATAATAATCCTCGGAGATGTGTTCCCGGTTATTTGGACTTTTGCCA-TGAATACATCACTAAAAGTTGGAAGTAGCATGGTTT-CCTCCAGCCATCTGGTTT---------------AACTGAAAAACATAAATATTG---GTTTTCTTATCCATGTATTATTGCTTAGTTATGACTTGAATTATGTTCTTAAATACTGAAAAGTATCTGAAAATTGTGTATAAATTCAACATAAGCAACAAAGTAAATCATCCTTATTATACTTATTAAT chr4 + 94230402 28250183 28250182 28250908 28250183 28250182 28250908 726 CACTGCACAATTTTGATTTTTTTTTTAAGAAAGC--CCTCGTTGCCTCACTGTTCTAAGGCCACTTTGGTACAAGGATTTGTTATCTTGGCTGACAACTGCACTGAAGCCTATAATAAGAATTTCCTTCTTTCGCTCTAACAAGCAAATTCCCTGTTTTCTGAGAATCCTCTCTAGGAAGGCAGTGCTGAATGTGTATCAGGCTTGAAAAGAAAGCCTATCTACACTGCCATTTTCGCTTTTCATTTTTCTAATTTGCAACTCAGCTCACGTCCAGCTCAAAGAAGCAATTCTGCTTTCAAAATGCTGCAGCTGGTTTCCTCCAGTGCTCCCCCTATTCATAGCTAGGGAGGCAGTGGTGGGCTTACGCAAGATTGGCTTAAATGGGAAATCAATACTGGTTCCTTGGTTCCTACAAAAGAGCTGAACTGGACTGGATTGGCTCCAAGGAGAAAAAAGGAGTG----GAGTGGAAAAAAC-TGGCTGCCAGTGGGATAGGTACTCT--GCTGCATATGAGACTGTTTGGGTCTCTGCCACTGAACCCATCACAAGATGTCTGTGATAACCTGGCTTACCTCCTACCATCTGTTTTTGAGTAGATGATAAATATTGGAAAA-ATAAAAGTTGGAAGTTTTTTT-----TTTTTTTTTCCCTAGGCATATATTAGCTTA------TAAATACATAAATGTTTCTG---------------TTCAGCATCAGTAGGAATTTGTATC--TCATACTGTACTAACCAGT ..x....:......:.:x:--------......:--.:.:::x....x:-.:...:...:x::........:..::..:-:...............::.x:..:::.x.:.x.......:..:.:....x:.:..:......:..x.x..:.--....:.::....:::...:.x:..:---.x.x:............x.x.......:..x:.......:...:.....:....x.:...:..x..:xxx....:x..:........x.....:x:...............:.:.:xx..:...............:..........x.:..-.........x.:...:.x.....::.:.::.:........:.:.....xx::....:.......x.....::--...:.:...xxx-:...:..:....-------.....:...x....:....:x.----:.:::..x.....-...:.:...x..:x.xx::.x...x--.x..::.x:xx.::.:.....:::.:.....-....:x......x.:.x..:x.x::..:.x...:..-.....x:.......x...---------------x.:..:....-.....x:...---.....:..-----.x.x..x..x.:...x:..:xx..::x...------.......xx...x..x....---------------....:...x..:.:x..xx.:x...--:.x..:.:....x.::.:. 19M8I7M2D13M1I29M1I72M2I25M3I152M1I72M2I12M1I12M7I22M4D13M1D25M2D31M1I36M1I18M15I10M1D10M3I8M5D30M6D20M15D25M2D19M 470/680 69.1% 726/94230402 0.0% 84/680 12.4% 105549478 84665077 +8645 chr4 + 190214555 133806089 133806088 133806292 204 TTTTCCTCAGAGAAACATTTTACCAATTAGAGAAAAGGATGCATGTTTTCCAAATCATATTTAA-----CTCAAAATGTTTAAATACTAA-----AATATTAATGTATCTACAAATGTGTGCATAAATCTTTTAAACCCTCATAGAACATTAAATCTCAGGGCTTAGATCTATATTGGAGTT----AGCCATTTAAATATTTTTGGATTTAAAACAAT chr4 + 94230402 28256593 28256592 28256810 28256593 28256592 28256810 218 TTTTCCTCAGAGGGACTGATTACCAATTAGGGAACAAGAAACATATGCTCCAAATCACAGTTCAGTTTACTGAAAATGTTTGAACACTGACAGCAAATACTAGTGTATCTTCAACTGTGTGCACAAGCCTTTTCAAATCTCTCTGGACATTAATTACCAGGTCTTCGATCTACTTTAGAGCTAAACAGACATTGAATTATCTGTGGAGTTTGAACCAT ............::..xxx...........:...x.:..x:...:.x:.........:.x..x.-----..x.........:..:...:.-----....:..:.......x...x........:..::.....x..x:...x:x.:.......x.x:....x...x......:x..:...:.----..x....x..x...:.x....x..x:...x.. 64M5I21M5I87M4I32M 152/204 74.5% 218/94230402 0.0% 14/204 6.9% 105549496 84665059 +8867 chr4 + 190214555 133843050 133843049 133843499 450 AGAAATATAGTTTGACTTCTGGATATAGTATACCTTCTTCATAAAATAATGTCCTGAATTTTAGATGAGAATTTTACATTTTAAATGTGCTGTACAAAGCACTCTGACAATGATTATAATAAATCCCCCTTTACAT-TTACTCTGACGTATAACATATAGCA-ATGAAGAATCAAACCACATTCATACGAAAGAAAAAAGAAATATTCATCTTATGTGGTACTCTT--AATCTCTCTTAACATCTAAAGATATAGGTTTCCTATCTTCAATCAAACATATTGGTTAT-GTAATTATTGCATTCACTGCTGCACTTTGGACTTTTTGTTTAAAT-----------AAAGGCCACTCTCTTTTAAATATGTTAGGAAAGTACCTTAAA--AATACACTAAATGTATTCTTTCTTAATTGCAGTAGAGATATTTC---ATGTGCCA-------------CATATTTTATCAAATGTCAAAATCTCAA chr4 + 94230402 28259306 28259305 28259759 28259306 28259305 28259759 454 AGGAACAGAACTTGTCTCACAGACATGATACACCTTCTTTTTAAAATAATGCTCTGAATTTTAGATAAAAGCTTTGCATTATAAA-----TGTACAAAGCATTCTGCTAGGGAGTGTAATAAATCTGCTTTCAAATATCACTCTGATGTATAATGTATAACAGAAGAAGAATAGTACCATTTT-----AAAAGAAATAGGGA--------CTTGGTTTCTATCTTTAAAATCCCTTTTAACTCTTAGAAACGTTGATGGCCTGTTCCCGATCACAACTAGAAAAAGTGGTAAACACTACATTTA-------ACTTTCTAACTTTGATTTGAATGGGAGTCCTTAAAGGACTGGCTTCACCTAAAAAAAGAGAAAAAATGCTTTATATGAGTACAGTCACTGCACTCACT-----TCATGGTGGAGTCATCTCTTTATGTGACAGTTCGTTCGTTGCCACTGCTTTCAAAATGTCACACTTTCAA ..:..:.x.::...x..:x::..:..::..:........:x..........::.............:.:.::...:....x....-----...........:....x:.:x..x.:.........:x.:..:.x..-.:.......:......::....:..-.x.......x:x....:x..-----:.......x.:.:.--------...:xx.xx..:::..--....:..:.....x::..:.:.::.x.:.xx...:.:::.:....x.xx..xx::xx:.-....x:.:.:....:.-------.....xx.x:...x:...:...-----------..:.:.::x::..x::....x.x:xx:::...:.:.:...x.--.:....x.x.x..:.:..x:.-----.::::..:...x:..:..---.....x..-------------..:xx:..x:x........x.x.:.... 85M5D46M1I25M1I20M5D14M8D16M2I59M1I16M7D22M11I42M2I21M5D18M3I8M13I28M 272/420 64.8% 454/94230402 0.0% 64/420 15.2% 105583744 84630811 +3229 chr4 + 190214555 133874330 133874329 133874373 44 TTCCCTCTCTCTCTCTCTCTCTCTCTCACGCACACACACACAAA chr4 + 94230402 75248047 75248046 75248090 75248047 75248046 75248090 44 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACaga .:.:::...................x...:............:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 58626283 NA +3441 chr4 + 190214555 133874333 133874332 133874393 61 CCTCTCTCTCTCTCTCTCTCTCTCACGCACACACACACAAACACACACACACACACAGAGA chr4 + 94230402 75248048 75248047 75248108 75248048 75248047 75248108 61 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagaga ...::.....................:............x.x.x.x.x.x.x.x.x..... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 58626285 NA +3019 chr4 + 190214555 133874334 133874333 133874369 36 CTCTCTCTCTCTCTCTCTCTCTCACGCACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.x.............. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 121273030 68941525 +3162 chr4 + 190214555 133874336 133874335 133874373 38 CTCTCTCTCTCTCTCTCTCTCACGCACACACACACAAA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA ...................x...:.:............ 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 121273032 68941523 +3003 chr4 + 190214555 133874338 133874337 133874371 34 CTCTCTCTCTCTCTCTCTCACGCACACACACACA chr4 + 94230402 12601304 12601303 12601337 12601304 12601303 12601337 34 CTCTCTCTCTCTCTCTCTCACACACGCACACACA .....................:...:........ 34M 32/34 94.1% 34/94230402 0.0% 0/34 0.0% 121273034 68941521 +27013 chr4 + 190214555 133893108 133893107 133894025 918 TCTAGCATGTCAGTTTAATCTGAAAAAAATTTGAACAAAAAGCCCAGTTAAAAAG--AGACTCCCAAGTGTATGACAAAGTGTTATTTTACCTGGCACAGAAATTGTGCATTATAAAGGTGAAGCGAACTCTTAAAGAACCAATGCCCCAAGCAAAAAGAGTGAGAGAATCTTAG-------ACCTACAGCAATTCAATGAATTAATATATCTGAGAGCCCTGAAGTAGTTAGTACTTGATTCAAGGCAGAAG-TGGAGTTGCTCCACTCTTCATCTTCAAGTAAAGATGAATGGGCTTTTATAATGGACCTTGCTCTGACAATGGGAATAAATGACTGTGATAGCTGAACACTTTCAAGGAGACTGGGAGATTCAATATGCAAAGTTTTTCATTTTATCATTGGAAGTACAGCCTTGGATTATTACTGACAGCCAAGATGCAGTTAAAGTAAAGGCCACACATACTATTGGCAATAATAAATTTTAAAATCTGGTATCTTTTTGCTGAGGCCAACTCTGAGTCATTTATCAAAGAAAAAAAGAGGATAAAGAAAAAGAAGTACGTTGCTCTATTCCAGCTAAAAA--CAACATATATACATTTTCCAGATTATTTTTGCATGAATA---CCAAAAAAACTATAGTTTTAAAATTGTGTTAATGAAACTATTCTCTAAA---------TTCCTAATAATA---GCAAATC-CTATAAACACTAATAGTATAATGTAATTGAAATTA--------------------------GTATACCTCCGTA---TTTTGATAAAGGCTTACAATATATTGTAAGAAGTT-----TATTTTTATTATACAAGCCCAGAGTT--AATAGAT-------------CCTTCAATTTTTTA-TTAACTAAATGCCTATT-GTAATTATTTATTAAATAGTTCTGAGTTTTGCTTGAAAACCAAGACAAAATGTAGTTTTTAATTAACTATCAAATGGTTATTGAAGTG chr4 + 94230402 28274060 28274059 28275019 28274060 28274059 28275019 960 TCTAACCTGTCAGGT-------AAAACAAACCACAAATGAAGAAAGGTTAGAATGTAAAATCCACAGGTCTGTGTTAAAGTGCTATTTTATCTACTACCAAAATTGTATGCTACAAAGGTGAAGGAAACCATTACAGAACAGGTGCCCTGAATGA-------GAAAAAATTTCAGTCTGTGGACCTA-GGAGCCTCCTTG--TTGATTTATTTGAGAAAACTACAGTAGTTAGTACTTGATTCAGAGCAAAAAATGGAGTTTCTCTACTTTTCATCTTCAAGTAAAGACAAATGAGCTTTCATAATGGACCTTGCCCTGCCAATAGAAATAAATGACTGTGATTTCTGAACGTTTTCAAGGAGACCTGGAGACTCAATATGCAAAATCTCTCATTCTATCATTGAAAGTGCGGCCTTGGATTATTACTGACAGCGAAGATGCAGTTAAAGTAAAGGTCATCCAGACTATTGGCAATAATAAATTCCAAAATTTGCTATCTTTTTGCTGAGGCCTGCATTAGGCCATGCATCAAAAGCCCA-----TATTAAAACAAAAAAGTTGTTTGCTCTCACTCAATAAAAAATGCAACATGCAT---TTTTCAAGTTTGCTTTTT--TGAATAAGCTAGGAAAGACTTCATATTTCATATTGTCTT-TTAAATATACACACTAGGAGAACTGCCTACCAAACAATCTGTTTAAATCTCTGTGCCCACCTGTAATGTA---TAACTGAAGTTGCATAAAATAATCTCTTGCTTGTAGGTGTAGAAATCTACATTTTTTTAATAAAGACCAAGTATAAACACTAGAGAGTTAATTCTCTTTTCAGCATGTAAGCCTGAGGtttaaaaagataaataaaaaattaactttaatattGTAGTTAAGTAATTACCTGTTCCTAAATGGGAGACAAATAG------GTATTGCTTTAAATCTAAGGGCACGTGGTATTTTTTCTTTGCAATTTCTTCATTATTAAACTG ....:.x......x.-------....x..x:::x.x.x:...xxx:....:..x.--.:.::.x..:..x.:..x:......:.......:..:x:..x:.......::::..:..........x:...:x...x.....x::.....::.:::.-------..:.:...:.:..-------.....-:.x:x:..xx..--..:..x...:.....:xx..:x....................::...:..:-.......x...:...:..................::....:.....:..............:...x....:.:................xx......::............:x.....:............:.:.:.....:........:....:.:......................x.....................:..:x..x....................::.....:..x..................x:.x:.::.:...x:......::xxx.-----x..x..:.x...:....xxx.......xx::..::x.....--......::..---.....x..x..::....x--......---:x::...:...x:.xx...x.x.....x..-x.:..xx..:x.x...::---------.x..x..:...x---x:.....-..:.:xx...:x:..:.:..---...:....:..:--------------------------...x.xx..:::.---....:......:.:x.xx...x.:xx..:::....-----.x....:.x:..::.....::::...--..x....-------------x...:...x..x..-....x...x.:...:..-x...x.:xxx:x:......------..x......x...x.:...:xx.x:..xx:.....xx..x:.x..:xxx.x:.....:..x.. 15M7D33M2I98M7D13M7I5M1D12M2D51M1I286M5D41M2I10M3D18M2D6M3I30M1D18M9I12M3I7M1I20M3D12M26I13M3I35M5I26M2I7M13I14M1I17M1I19M6D63M 625/881 70.9% 960/94230402 0.0% 116/881 13.2% 105619048 84595507 +3814 chr4 + 190214555 133896948 133896947 133897088 141 AAGGAAAACAAAATAAGAAATAGAA-AGGAAAAAAGGGAAGAAAAGAA---AAGGAGAGAAGAGAAAAAAAAAAAAAGGAAAGGAGAGGAGAGCAGGGGAAAGAAGAAGTGAAGTGAAAAGAAAGGGGAAAGGGAAAAGAAAAAG chr4 + 94230402 6766724 6766723 6766858 6766724 6766723 6766858 135 AAAGAAAACAAAGAAAATATTACCATAGGCAAGAAGTGGAGCAAGCAATTACAGGAAGCTACTGGAAAAAAATTAAAGGAAATGAGAAAA----------AGGAAGGGGCAATGTGAAATGGAAGGGGAAAGGGAACAGCAGGAG ..:.........:x..:x.x..xx.-...x..:...x.:..x..:x..---x....::xx.xx.:.......xx........x....::.----------.:....::.::.x......x.:..............x..x.::.. 25M1I22M3I39M10D45M 91/131 69.5% 135/94230402 0.0% 14/131 10.7% 127130224 63084331 +3117 chr4 + 190214555 133897032 133897031 133897130 99 GAGAGCAGGGGAAAGAAGAAGTGAAGTGAAAAGAAAGGGGAAAGGGAAAAGAAAAAGATATTAGTGTTTTCTGTTTAATTATTCAGTATTATTTACTTT chr4 + 94230402 78913965 78913964 78914061 78913965 78913964 78914061 97 GAGTACGGGGGGAGAAAGAAGTGAAGTGTGTGTGGAAGGAAAGGTGAGAAGTTAAAGATGTAAATATTTGACGTTTGGTTGTCT--TTTTTTTTTCTTT ...x:.:....:.::.............x:x:x::.:..:..:.x..:...xx......:.x.:.:...xx:....::..:.::--.x..x...x.... 84M2D13M 62/97 63.9% 97/94230402 0.0% 2/97 2.1% 54983067 NA +3034 chr4 + 190214555 133897993 133897992 133898053 61 TGTGTGTGTGCGTGTGTGTGTGTACACACGTGTGTGTGTGTACACGTGTGTGTGTGTGTGT chr4 + 94230402 86633930 86633929 86633990 86633930 86633929 86633990 61 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:...:..:x..:.:...x....:...:.:......:.:....:x...:..::.x...:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 47264063 NA +3328 chr4 + 190214555 133945686 133945685 133945745 60 GCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGCGGGAACCCAGAGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ....x......:...........:.........x.xx.x...xx:.xx.........:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 57912480 NA +3091 chr4 + 190214555 133946766 133946765 133946892 127 GAGGGAAGAAGGAAGGGAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAATGAAGGAAGGAAGGAAGGAAAGAGAGAGAAAGAAAAAGAAAGAAAAGAAAAGAAAAGAAGGAAAG chr4 + 94230402 398520 398519 398646 398520 398519 398646 127 GATGGAAATGGAGAGGGAGAAAACAGAGCTCCGAGGCAGGGAGGGGTAAATCAGCAGCAGGAAAAAGCATGCAAGTTTGGAAGGAAAGAGAAAAAAAAAAAAAAAAAGTTGGAGGTAGGAGGTAAAG ..x....:x:.::......:..:x.::.xxxx:...x...:...::x:..xx.:x::x:.:.x:...x.x.x...xxx....:..:.......:.....:...:...:xx::..:x.:..:.x.... 127M 73/127 57.5% 127/94230402 0.0% 0/127 0.0% 133548246 56666309 +3136 chr4 + 190214555 133951075 133951074 133951155 81 AGGATTGTTTTTTATTTTTGTTTGTTTGTTTTTTTGTTTGTTTGTTTTCCATTAATGACAACATAGCCATTGTCTCTTGCC chr4 + 94230402 28363193 28363192 28363273 28363193 28363192 28363273 81 AAGTTTATTTTTTCCTTTTTTTTGTGTGTTATTTTGTTTATTTATTAACTTCTAGTGAAAAGATTATTTGTATTTCTTGCC .:.x..:......x:....x.....x....x........:...:..xx.:x:..:...x..x..x:::xx.:.:....... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 105587882 84626673 +15450 chr4 + 190214555 133985733 133985732 133986325 593 GTCATCTCTATTTTCCCTGTTCTAATAAATTATTCTTGAATCCCAAAACATTGAAAGTATAA--TATTCATAT------------------TTCAACATAA----TGAAACCAAATAATTTCTTATCATGAAT------------GTACCATATA------ATATTACTTGTACTATAAATTCTCTAACTTCTGATTA-AGGTTTCCAAAGCTATAGCAATGCAAGTGACTTGATTCCAGATGAATAATGTCAAGCTCAGTAAAAATTATTAAGCTCTGGTGTCTGCAGAACGTTACAG--CACTTGTTTTATATTGTACACATCGAGAATA--CTCAAGGGAGAATAAACTCTTATATAATCATTATTAAATATTTATTAGTCACAGCTTAAAATTTCATTAATTGTATTACCATAGAA----AACTATTTCCCAAACACA-ACACTTTTAAGTTTTATAATTAAAACTTTGGATGTCAATATCCTTCTAGCTTAAGGTAGCAGGTATTA----AATGCTTGTCTGGTAGTGAAAACTTATTGCCATTTAATTTTTCCATTTATAACATAAA---CAACTTTTTATATCTTTCCTTTCAAAATT--ATCCCT---TTGAATACTTTAAAACTATTGTTTTCTTACT----AAGATAGCAA chr4 + 94230402 28308391 28308390 28309041 28308391 28308390 28309041 651 GTCATCTC-ATTTTCTTTCTGTTAATAAATTCTTCCC-AACACAAAAAGATGAAATATACAAGATATTCAAATACTACTTTGCTTTCTTTGCTTAATAAAACAAGTGAAAGAAAGTGAATAGCAATCATGCATCTTAAAGACCTTGTGCTATTCATAAAGCATATTACTT---TTTTAGGCTCCCAAAATTCTAATTAGAACTTTACAAAGCAATAACAAAGATAGCAACTACGTTCTAAACTAATAATTCTAAGCCCAGCACAAACTGGAAAGTCCCAGAGCCAGTAAAATAAAACAAGACACCTGTTTTAGATGGTACACATCAAAAGCAAGCCCCAAGGATAATAACTTTTAATATAATCATTATTAAATGTTTATTAGCTAAAGCTCAAAATATCAAAAAATGTATTGTAGTAGAGAAACAACTATGTCCCAGATGCACAAAATCTTTGTTTTGATGATTAAAACTTAGGTTGCCAATAATCTTCTGGCCCAAGGTAGCAAGTGTTATTACTGCACTTATAAAATAATGAAAGCATGTT-TCATTCAGTTTTTCTATTTATAATTTAAAGTGCACTCCTGTTCATCTCTCTGTTAGAAATTAAATTCTTAAACTAAACACTTTA----TAGTTTTTTCATGCTCCAGGAGATAGCAA ........-......::.x.x:.........x...::-..:x.x....x..x:..x:..:..--......x..------------------:.:..:.x..----.....xx..:.:.x.xx:x......x..------------..:.:..x:.------.........---:.x..:::..:.x..x....:....-.:x...x......x...:...x.xx..::...xx:...:.:.:x......x::....:...:.x...:.:xx...::.::.x.:.x.:.:..::xx...:--...:.......x..x.........:.:.::.--.:.x.:...x.....x:.:.x..................:........::.x....:.....x...xx..x......::x:....:----......x.....:.::..-.x.x.:..x:x...x..:..........x..x..:.....x:.....:..::.........:..:...----x:::...:.xx::..:.....:.x.:..-:....:.:......:........:x....---..x:::.x.x:....:..:x..x:.....--..:.:.---:.:..:......----..x.x.....x.:..----:......... 8M1D28M1D24M2I9M18I10M4I28M12I10M6I9M3D25M1I100M2I31M2I86M4I18M1I68M4I28M1D29M3I29M2I6M3I12M4D15M4I10M 405/583 69.5% 651/94230402 0.0% 78/583 13.4% 105677342 84537213 +3131 chr4 + 190214555 133986446 133986445 133986502 57 TTTGTTTGCATTTTTTTCCCTATTCAGGACAAATACTTAATGACAATGAGA----AGAAAA chr4 + 94230402 79837691 79837690 79837751 79837691 79837690 79837751 61 TTTGTTTGCTTTGTGTTCTCTAGTCAGGACAAAAACTTGATAGTAATGAGATTGTAGAAAA .........x..x.x...:...x..........x....:..:::.......----...... 51M4I6M 47/57 82.5% 61/94230402 0.0% 4/57 7.0% 54148755 NA +3017 chr4 + 190214555 134006016 134006015 134006072 57 CACAATTTAAGTTGTGTAATATGTATGTGAAATATATACTTAATATATAAGTAAAAT chr4 + 94230402 62872564 62872563 62872620 62872564 62872563 62872620 57 CACAATGTATATTGTGTGATATATGTGTGTATGATTCACTTGATATACAAGTGAAAT ......x..x:......:....:.:....x.xx..x:....:.....:....:.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 71133452 NA +3664 chr4 + 190214555 134025191 134025190 134025262 72 TGCATGGTAGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033195 76033194 76033264 76033195 76033194 76033264 70 TACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:..::..:.....:.--....:.:...........::........x.xx.x...x..........::.:.. 16M2D54M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% 57991996 NA +10939 chr4 + 190214555 134051532 134051531 134051811 280 TGTAGTCAAAACACATTTAGATACCCTGATTACTTTAGCTTTCAGGTTAAGAAATTTTATTTGAAAATGTTCTTTTTAGGCATTGAAAAAA-TCTTTAAAGTGTAAATAAGCCGAGGGGAGTTATTT-CAACTAATGACATGGCCTGAAAAGAACTGAAGCAGCAAAACTCCATGTCTGAAGTTTAGATTGATTGCCACTATGCTTTAGAGTTTCATAGCCTCTCTAGAATAAAGGAAATATCACATTTTAATGTGAAGTTACAATTTAATTTTGTTAGCTG chr4 + 94230402 28318804 28318803 28319072 28318804 28318803 28319072 269 TGTAAGCGAAAAAAAACCATGTTTGTTGATTACCTTTGCATCTA------------CTTTTTGAAAATATTTGTTTTAAGCACTAAAAAAAATCTTTAATGTGTGAGTGAGCCTGAGGGAGTTGTTTTCAGCTAATGACATAGCTGGAAAAGAGCTGAAACGGCAGAATTCTGTTCCTAAAGTTCAGATTGATTGTCACTATATAATGCTAGTTTATAGCCTCTCTGGAACAAAGAAAATATTGCCTTTTAATATATGGTGAAAA-TTAATATTCCAAGCTG ....:x.:...x.x.x::.x:.x:x:.......:..x..x.::.------------:.x.........:..:x.....:...:.:......-.......x....:.:.:....x::.......:...-..:..........:..:x.......:.....:.:...:..:..::.x:..:.....:..........:......::xx.:xx:x..:...........:...:....:......::.x.......:.:x:..x.x..-.....x..x:x..... 44M12D35M1I35M1I137M1D16M 190/267 71.2% 269/94230402 0.0% 15/267 5.6% 105732728 84481827 +3138 chr4 + 190214555 134079557 134079556 134079609 53 CAACAGAGCAAGACTTCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382709 88382708 88382761 88382709 88382708 88382761 53 CAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ...x:.........xx...........::.:..............:x.x.:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 45696848 NA +3057 chr4 + 190214555 134079565 134079564 134079623 59 CAAGACTTCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTGCATCTTT chr4 + 94230402 47557082 47557081 47557140 47557082 47557081 47557140 59 CAAAGCTTTATTTTTAAACAAAAAAGAAAAAAAAAGAAAAAGAAAGTATGTCCATCTTT ...::...:x.:.:x...x......:.........:.....:...:xx...x....... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 86522483 NA +12117 chr4 + 190214555 134081676 134081675 134081975 300 TTTTAAAATCACAA-----TGCTGTTCTACTCTCACCTGCTTGGTAGAAAAATGTAAAAAAAAGAAAAAAGAAAAACCAACTAACCAAAAAAACACAAATAAACTTAGAAAAACCTGAATAAAATGACATACAGTTCTGACTCCCATTAAGGTCCCTAATGATGCTCATTACGACCCCAACTGCATTTTGATGCTGAAATATAATGCTTCTATTCATCATCGGAATAGAATATGGATGCTGACAATTGACAACACTTAATAATAATAGAAGAGTTCACAAAATTCAAAACTCCCTGTGTATATTG chr4 + 94230402 28327025 28327024 28327305 28327025 28327024 28327305 281 TTTTAAAGACATAAATAAGCACTGTAGAGCTTTTACCTGCCTGTTAGCAGGA------AAGGAAGATAAATAAAAACAAACAAACTGAAAAAG-------------AAAGAATCCT----AAAATGAGATCCAATGTTTATTCCCATTATGCTTCCTAATGATGCTCTTTACAATCCTAACTACATTTTAATGCTGGAATCTAATGCCTCCATTCATCACTAGAATGAAATACAAATGCTGACAATTGACAA-ATTTAATAGTAACAAAAAAGTTGACAGGACTCAAAACTCTGTGAGCATATTG .......:x..:..-----::....xxx:..:.:......:..x...x.::.------..::.::.x...x......x...x...::.....:-------------.:.:..x...----.......x..x..:.x:.x.:........x.x.:.............x....:.:..:....:......:......:...x......:..:........:::....::....:::.................-.:......:...:.:..:....x...::.:.........:x..x.:...... 14M5I33M6D35M13D10M4D132M1D52M 205/276 74.3% 281/94230402 0.0% 29/276 10.5% 105754651 84459904 +3104 chr4 + 190214555 134086721 134086720 134086787 67 TTTTTTTTTTTTTTTTCTGGATGATAGGGTATTCTATTTATTTCTTTTTCTTTGTTTGTTTGTTTTT chr4 + 94230402 69702268 69702267 69702334 69702268 69702267 69702334 67 TTTTCTTTGCAGTTTTCTGCATAAAAAGTTATTCTTTTTATTTCTTTTTGTTTCCTGATGTGTTTTT ....:...x:xx.......x..:.x.:.x......x.............x...x:.x:.x....... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 64384453 NA +3154 chr4 + 190214555 134086722 134086721 134086792 71 TTTTTTTTTTTTTTTCTGGATGATAGGGTATTCTATTTATTTCTTTTTCTTTGTTTGTTTGTTTTTGTTTT chr4 + 94230402 44280236 44280235 44280293 44280236 44280235 44280293 58 TTTCTCTATTTCCTCCTAG-------------CTACTTATCTCTTTTTGTTTGTTTGTTTGTTTTTGTTTT ...:.:.x...::.:..:.-------------...:....:.......x...................... 19M13D39M 48/58 82.8% 58/94230402 0.0% 13/58 22.4% 89806486 NA +3354 chr4 + 190214555 134090629 134090628 134090706 78 GTGGCATACCTGTAGTCCTAGCTACTTGGGAGGCTGAGACAAAAGGATTGCCTGAGCCCAGGAATTTGGGATTAGAGA chr4 + 94230402 76033201 76033200 76033278 76033201 76033200 76033278 78 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ....:::..x......:.:.........::........x.xx:x.:.x::.:...:.....:.::..x..::.:x... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 58057428 NA +29797 chr4 + 190214555 134099573 134099572 134100349 777 TTATTTTGAAAGAAGAGTTTTCCATTAAAAACTTTTAAAAAACAATTACAAAATGGGGATTTCAATTTCTAAGTCAACTCTGCAATTGTAAAGGAGTGGGATTTGGAAATAAGCTTGACATTCAAACCTCATAGTATTAGTTCCATTGCTGCTTACTACAGGGATGTAATCCTCACAAAAATGCTATTTGATCTCAGGGAGGGGAAAAAAA--GATAATGGATTGACCCTCCACACGAAACCGTAAAAGAGTGTTCTGGGTTGCTGCCATTCAAATGAATAGAAACCGGCAGCAATTCTAACACCTATCCAGTTTCAATTTTGTAACATCTGCAGGCATCATTCTGGAAATGGTAAACATTTTAATGGTCAGACCCTGTCCACTTATG-CATTACTATTTCCAGTATTATCCCCCATTTCTATCTGGAAACAGAAACTAAAATGTGACAGATTGCTGTGAATGAAATGAATGAATGAAATGAATGGAGATGCC----GCAT------CAGCAGCGGCAAACTCGCTCCTTTCCCATTCTTTTGTTGTCCTTCAGAGATCTCCCTTATTGCTTTGGAAAATTCAAGAGTCAGACACTACATTTTAATAATGTGGCTTGAACTCCAAGCATCAGCACATGAATTGATTTAAGAGCATCGAACAACTTTATAATTGCAGTCGATC-----TCTGCCTTTTAAATACAAATTCATTCTGATTGAATT------AAGATTGAAGCTGCA---CCTTTTTTGTAAA------------------TTGAATTTTTATAAATA-----TAAAAACTTTAAAGTGTCTAGTATACA chr4 + 94230402 28337942 28337941 28338740 28337942 28337941 28338740 799 TCATTTTTAAGGAGAATCTTCATGTCTTGAACTTTTAGAAATCCATTTAATATTTTAAAGTTCAATTTGTAAGTCAACTCACTGTTTGTAAAGCAGTTCAATTTTGAAATTGGTTCAACATTTGAACCTCTGCACATTGGTTCCACTTCAGTATGCCACAGAGACCTAATCCTCACAGAAATGCTATTTGATCCCAGGAAGAAAAAAAAAAAAGATAATGGATTGACCCTCGGCATGAAACCATAAAACAGAGTTCTGGGTTGCTGCCATTCAAATGAATGGAAACCGGCAGCAATTTTAACACCTTTCCAGTTTCAATTTTATTGCATTTGCAGGCA-CATGCT-GAAATGGTAAAGATTTTAATGGTCAGGCTCTGTCCACTTATACCATTACTATATCC-TTATTATCTCCTG-GTCTGTGT-GAAACAGAAATGAAAAGGTGCCAGATTGCTGTGAATGAAAAGAATGA-------------AGATGCCATTTGCATTCATTCCAGTTGAAGCAAATCCCCTTCCCTCCTATTTCTTTGTTGTCCTTCAGAGAGACTTCTCACAGCTTCTG-AAATCTATGAGCCAAGCACTACATTTCGATCATGTAGCTAAAACCCTATGCATCAGTGTAC-CATCACTTTCATAACACTAAACCTCTTT-TTATAAAAGTCCATCAATTGTTTCATTTCTTGATAAA-------TCTGATTCAATTTAATAGAAAAATTCAGCCACATGTTCTTTTTTAAAAAAAttatttttatttttattttatttttaATAAGTATGACTTAAATACTGTAAAGGGCCCAGAGCACA .:.....x..:..::.x:..:x::.:xx:........:...x.x...xx.x.x.xx::.x........x...........xx::x........x...xx:....x.....x:.:.::.....::......xxx::...:......:.x.x.:x.:.:....:..:x...........:...............:....:..:::.......--..................x:..:......:.....x..x............................:................:........x...............:.x:...:........-...x..-...........x..............:.:............:-.........x...-x.......:..::-x...:.x.-..........:x....x...x...................x......-------------.......----....------...:x.x:.....::.x..:.::...:...::..................xx:::..:.:x....:x.-....::.x...:..::..........::..x....:...x:...:.:.x.......:::.:-x..::x...x.x.:..:::...xx....-.x..x:x....x...-----.:.xx:..:.x:...x.-------.......x....------..:.x.xx...::..---:.......:x...------------------..x.x....x....:..-----....x...x.....x.:.:..x::... 211M2I125M1D6M1D42M1I13M1D13M1D8M1D47M13D7M4I4M6I68M1D61M1D28M1D15M5I17M7D12M6I15M3I13M18I17M5I27M 562/749 75.0% 799/94230402 0.0% 78/749 10.4% 105761631 84452924 +13347 chr4 + 190214555 134104886 134104885 134105217 332 TAAATGTAAATGG-GAGACAGGCATGACCAATTACACATTACCGGTGTGCTCTCATGTCTTAATAAAGTTGAGATATCAATTTGATTTTTAGCTTTTTTCCAAGAAGTGCTGCCCAACAAGATGCAGAATGATAAATGTTGACCTCTTAAAACCACTAAGGTATAAAGTGCAACAAAAATT--GTTAATACAACTATGTGATTAAGTGTGTCTCTGTCAATGAATCACAGTGACAGGAGTATTCCAGAGTTTGCCTGCAGGAGTGAAAAATGAGGTCGTTAGTGA-AAATCAAATGCAAATATCATCAGATTCTGGAACATTTCTCTTTACATATT chr4 + 94230402 28344297 28344296 28344621 28344297 28344296 28344621 325 TGAAAGTGGATGGCAAGACAAGCATGCCCAATAACACTTCACCACTTTACCA--ATACTTTAATGAAGTTGAAAGATCAATTCAGCTTCTAGCTTTTCTCGGAGAGGTGTTGCCTAACAAGATACAGAATGATGAATGCTGATCTCTGAAAAC-------GTATAAAGTACTACAGTTTTTTGTTTAATTTAACTGTGTGATAAAGCAAGCTTCTATAGATGAAT--CAATGATGTGGCTGTCCTAACAGTCATCTAGAAAAGTGAAAAATGAAATCATTAGTAATAAATAAAATGCAAATATTACTGAATACTGGAACATTTTTCTCCCCATATT .:..x..::....-:.....:.....x.....x....x.:...:x.x.:.:x--..:::.....:.......:.x.......::::..:........:..x:...:...:....:........:.........:....:...:....x.....-------.........:.x...:xxx..--x.....x:....:......x...::x.::...:.x:......--..:...::x.:x.:.:.:.:x:x.:::..:x.::............::..:.....:.-....x............:.::::..x...........:...::x...... 13M1I38M2D99M7D21M2I42M2D58M1I50M 229/321 71.3% 325/94230402 0.0% 15/321 4.7% 105760589 84453966 +3541 chr4 + 190214555 134129934 134129933 134130007 74 GTGCACCTGTAATCCTAGCTAGTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.:.....x.::::........x.xx.x...x.:..............x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 58096730 NA +3454 chr4 + 190214555 134154316 134154315 134154398 83 CGTGGTGGCGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGTCTGAACCCTGGAGGCAGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--......:...........::........x.x:.x...x::::.......x.:..x:xx...:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 58121119 NA +21375 chr4 + 190214555 134156018 134156017 134156545 528 TCTACAAGGTTTGTGCTGTAATTGGAACTTAAGTAACATTTGTAAAGTGTTATCTGTCGGAGCCTGAAGAGACCCAAAGAGAATGTATGTCATTATGCA-AAATTACTAATTAAGTACAAGTAATTTAGCAGATAATTTACATGTTCATTTTATAATAGAAATTATTTAGTTTTAAG-GTCCTCTTTGTATTTCTAAAGTAATCTCGACCTAAGGGATCACAGCCTGTTAAGAAGAAGTATAAATTATAGAATGAGACATATGTTTAACTGACTCATAGAGCTTTTGTTGTGGCTAATGATTTTTCTAACAGTAATTGCATAAGGGAAAACATTTTCTTTTTAAGTAAATAGTGCTCGTTACCTCTTAAATCTACTGTCACTTG------ACAACATTAATGTGGAAAAACTTCTACCTTC-TTGATTAGCTCTCCAAGGATATTCAGCAGCTTTAAATTAATATTGATGAAACAGAAACCATCATATCCATC--AGTGTTCTTACAAATGTGGATGCACGGAAAAA-AATAATATTTCA chr4 + 94230402 28393830 28393829 28394358 28393830 28393829 28394358 529 TCTACTACGTCTGAGGTATAATTGGCACTTAAGAAACATTTGCAATGTGTTCTTAGT--GTATTAGTAGAGACC-AAAGAGATACTGGGTCATTATGTATAAATTGGTAATTAAGAGGAACCAATTTTCCAGTTAATTTACATGTTCATTATACATTGAATATTATTTAGTTTTCTGTGTCCTTTTTGTGTCTC----ATAAACTTGACCCAAGGGATCTAAAAGTATTAA-AAGATGTGtaaattataaaataaaatgtatatttaaCTGACTCATTGAACCTTTATTGTGGCTAATGATTCTTCCAGCAATAATTGCATGAGGGAAAACA-TTTCTTTTTAAGTTAATAGTGTTCACTACCTTTTAGAGCTGCTGTCACTGGGAAAAAGAAACAGTAATGTACTGAAATGTCTGCATTCTTTGATGAGCTCTCTGAGGGAATCTTGTAGTTTCAAATTAA-ACTGAT-AAATAGAAAGCAATATATCCTTCAAAATATGTTAACTGACTTGACTACAAAGAAAAATAAAGACATTCCA .....x.x..:..x.x.:.......x.......x........:..x.....x.:x..--.x:::x.x.......-.......xxx.:x.........:.-.....:x........x:x..x:.....xx...x.................x..:.x.::.x.............xx.-.....:.....:.:..----:...x..:....:........xx.:xx.:....-....x..:.........:...:.:.::...:..............x..:.:...:...............:...:.:..:.........:..........-.............x.......:..::.....:...:.x..:........x.------:x....x......:xx:...:x...:.x...-.....x.......::...:x..::x.:..:..:.......-.:....-...:.....x..x:......x..--.:.:.x:.x..x:.:x..:x.:..x:......-..x:.:...:.. 57M2D15M1D24M1I77M1I16M4D33M1D100M1D51M6I31M1I40M1D6M1D23M2I32M1I12M 389/517 75.2% 529/94230402 0.0% 23/517 4.4% 105762188 84452367 +3096 chr4 + 190214555 134164123 134164122 134164192 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 58130926 NA +3314 chr4 + 190214555 134223963 134223962 134224012 50 TAAGTTTCTAAATTAAAAAACAAACAAACAAACAACAACAACAAAAAACC chr4 + 94230402 70137926 70137925 70137975 70137926 70137925 70137975 50 TAAGTGTTCACTTTAAAAAACAAACAAACAAACAGCAACAAAAAAGAACC .....x.::.xx......................:......x...:.... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 64086037 NA +3267 chr4 + 190214555 134223967 134223966 134224021 55 TTTCTAAATTAAAAAACAAACAAACAAACAACAACAACAAAAAACCATCCTTTCA chr4 + 94230402 81996034 81996033 81996088 81996034 81996033 81996088 55 TTTCTTCTCTTAAAAACAAACAAACAAACAACAACAACAAAAAAACCTTATTCCA .....xxx:.x.................................x.x.:x..:.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 52227933 NA +3069 chr4 + 190214555 134223969 134223968 134224019 51 TCTAAATTAAAAAACAAACAAACAAACAACAACAACAAAAAACCATCCTTT chr4 + 94230402 29663832 29663831 29663882 29663832 29663831 29663882 51 TTTAGATTGAAAAACAAGCAAATAAACAACAACAAAAAACACCAAACCTTT .:..:...:........:....:............x...x.x.x.x..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 104560137 85654418 +3423 chr4 + 190214555 134223978 134223977 134224033 56 AAAAACAAACAAACAAACAACAACAACAAAAAACCATCCTTTCACAGGGCTTACTC chr4 + 94230402 17225739 17225738 17225793 17225739 17225738 17225793 55 AAAAACAAACAAACAAACAACAACAAC-AAAAACCTTCTTTTCTCCAGGAATACTC ...........................-.......x..:....x.x:..xx..... 27M1D28M 48/55 87.3% 55/94230402 0.0% 1/55 1.8% 116998239 73216316 +3039 chr4 + 190214555 134224695 134224694 134224769 75 GAGCAGTAATACAATCAACTAACAAATATGAACAACAACAACAACAAAAAGAAACAAAACATCCAGTAGAGATAA chr4 + 94230402 24083626 24083625 24083700 24083626 24083625 24083700 75 GAGAAGCCAACCAAACAAAAAGCCCATGGAAACAACAACAACAACAAAAAAATACAGAATACCTAGCAGTGAGAA ...x..:x.xx...x...xx.:.xx..:x:....................:.x...:..:.:.:..:..x..x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 110141069 80073486 +3096 chr4 + 190214555 134228112 134228111 134228181 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 58194915 NA +3421 chr4 + 190214555 134237604 134237603 134237755 152 ACTTAGAATAATGGTCTCCAATTCCATCCAGGTTGCTGTAAATGCCATTATTTTCTTTCTTTTTATGGCTGAAT---------AGTATTCC------------GTGGTGTGTGTGTGTGTGTGTGCATATATTATTTATATATATATATATATATATATATATATATATGTCA chr4 + 94230402 80516955 80516954 80517124 80516955 80516954 80517124 170 ATTTTGGATGGTGATAGAAATTCCTTTTCATGTTGTTGTTGtttttcttctttttttttttttcttttttAAATCATTATGCAAACATTTCTGCAATTTGACAGTTCGGTGTTTTTGTGTGTGTGCATATATCATATATATACATACATTTATCCAT---TGTATGTATTTCA .:..x.:..::..:.xxxx.x.:.:x.:..x....:...x:x.x::x..x....:...:....:x.xx:.:...---------.::...:.------------..xxx....x.x.................:..x......:...:..x...x:..---.:...:...x... 74M9I8M12I54M3D13M 98/149 65.8% 170/94230402 0.0% 24/149 16.1% 53720649 NA +3132 chr4 + 190214555 134237725 134237724 134237769 45 TATATATATATATATATATATATATATGTCACATATATATGACAT chr4 + 94230402 75748968 75748967 75749012 75748968 75748967 75749012 45 TATACAGAAATATATATATATGTATATGTCACATTTATATAACAT ....:.x.x............:............x.....:.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 58488757 NA +3480 chr4 + 190214555 134239950 134239949 134240019 70 ACATGTAGTCCCAGCTACTGGAGAGGCTGAGACATGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......:.........x..:........x.x..x...x::........::.:..x:xx:..:..:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 58206742 NA +3052 chr4 + 190214555 134248522 134248521 134248592 71 TGTTTTATTATTTTAAAATAATGCATTTTAATATCACAAATGATAAAAGGATATTTCTTGTCAGCCTTTAC chr4 + 94230402 29907505 29907504 29907575 29907505 29907504 29907575 71 TGTCTCATTATTTTCAAGTGAATAATATTAATATTACACTTAATAAAAATATTCTTCTATGCAGCCTTTAC ...:.:........x..:.:.xxx..x.......:...xx.:......:x..x:....xxx.......... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 104341017 85873538 +51344 chr4 + 190214555 134262264 134262263 134263631 1368 AATCTCTTTAAATTGTGGAAAATTTTGAAAATAA-TTGTTCATGTGC---TGTGTAATGTGCTTTCTTTAGTGAAATCTTTA-CATAATGCCATG-ATCATGCAG-TGTTTTTATGTTGCAGATCAAAAACAAAAGAGAAAGCATGGTAGCATTATTTTCCAAGGTGTTAGCACAGGCTTATTTTCCCATAATAATGGAGTCCAAGTAGCTGGCAGAAACATTATAAAATGTCAACTTTCAAATGTAGCTGCACAGTTTAAATTCAGTCATATTTCACATCTGTGTTATGCAGCTCTATCCTAACAGGGGTAGAATCCAGAACATAATCTGTGT-TAGAATGGCCTTGAAAG-TAAAATGAGAGAACTCTTCACCTGCCCACTGATGTTCTTTCTGCTGTACACAGAAGCAAAAAACACAGGTTCAAGTTGCTGAAAACAAACAATTAGAAATCAAATCAAAG-CCTGTTTGGCTTCACAACTGAATGCTGAGATGCAATAGGAATCCTAACAATGCAAAGTAATAGCCTGCTGAATTCAATGAATACGGCTTAATACCTTTAGACCATAGCAAGACTTGGGTAAAATTAAAAAGTAATGTAAAGCTCTTT--GGTATGCTCTACTAAATTAGTATTCTGAGGCATGTGTCTACACACCATACATAATGAGGACTGTTGGTTTCATTTACAGACACTGGCTACATTAGCTAGCACTAATGTGTAAAAACGTATTGTATGGTGGTCTATAGAGGCACTCCAAATTTTCATTATGTTTTAGTCAAAAAGTGCTTGTTTTGCAGGATGGAATCCATGTCAATAAAATGGATTGGGTGTCACTTAAACCAAGTGACATGCTAATCTTCTAGAGGCCTC-TGTCCTTAATCTCTACAGGACATAAGTCAGTTTAGCAGCGTGAGCTGTTCTCACAGGTAGCAACTATTGAGCTCTTTAATGTAAATTCAAAAGCAAAGCTTATCAGTGTGTTTCAGAAATTGCTTCAATGTGGGTTGCTGTCTATGAAAAAAAAAATCCCCCTACTTCCTCC-AAATCCGTGGGCAACTTCCAAGTTTTTATAGTGCCTGGGAGCACCATTTAATTATAAAGAAATTGGTTTTGGTGATAGCTGCTCTGTGACCAATTGGATTGGAGGCATTTCTTCTGGCTATTATTAAGGTAACTTTACTATTGCCCTCATATAGTCAGGCATGATCAAAATATTAAGCA--AAGCAATGTCTCAATCCAGAATTTCAAGACCCAGTACCTA-----GATATTTTT------------AAAGTACAGCT---ATAACTAACCATTTAATAACAAAAGAAAAGAGTAATGGGATTGGGATTAATAATTCTTTAGTTTGTAGAGA-GAGTTACAAAATGTGGAAAATGAC chr4 + 94230402 28410508 28410507 28411867 28410508 28410507 28411867 1360 AATGTCTTTGA--TATAGAACTTTCCAATGATAAATTGTCTCTGTGTATATGTGT----TGTTTTCTTTTGTCAACAGTGTAGCATAGTTTCATGCATTGCATAAACGTCGACACATTTAAGATGAAAAGGAAGAGA-AAATAATGAAAAATTTGTTTTCCAAAGTATAAGTAAAAACTTATTTCTCAGGAATAGTGGAGGCCAGGTAGCTGGCAG--------------GCAGACTTTCAAAGCTGG-TGCACACTTTCCATTCAATAATTATTTTAATTCTCATGATGTAGCTCCTCAGCAGCAAGTGGAGCATCCAAACTGTTCCCCATGTCTGGAATAGCATTAAAAGAGAAGGTGAGAGAACTCTTTATCTAC--AGTGATTTTCTTCCTGCCATG-----------AAGGTCCACATTCCCATTGCTGAAAAT---TATTGGGAAATCAAGTTGAAGATCCCTGTGGCCTTTTGATTCAGTACCTTACTGAAATAATAATCGTAGCAATACAGTGCAATAATTTGCCTGATGCAATGAA----GTTTCAAGTGCTTGGTCTGTGGCCATTATTCAGTAAAATTAAAAACCAATGCAGTGTTCCTTTGGGCATGCTCCAGTGTGTTAGTGTGCAGTAACATGTACTGACAAAGAATCTCTAACGAGTGCTGCTGGTTTCATTTGCAGAC-CTGCCAATAGTGGCTAGCAATTGCCTATGAAAAGCCATTATACACTGGCCCATAAAGCAACACAAGATTTTCATTATGTTTCACTTAAAAAGTGCTTGTTTTGCAGGATAGAGGCCATGTCAATAAAATGGATTGGGTGTCACTTAAACTAAGTGACATGCTAATCTCCTGGAGCCCTTATGTCCATAATCTCTACAGGACACAAGTCAGTTTAGAAGCATGAGCTGTTCTCACAGGTAGTGACTATTGAGCTCTTTAATATAAATTCAAAGGCAAAGCTTATCAGTGTGTTTCAGAAATTGCTTCAGTGTGG-TTGCTGTCTAT-AGGAAAAAAATCCCCACACTTCCCCCCAAATCCCTGGGCAACTTCCAAGCTTTCACTGTGCCTGCAAGCACCTTTTAATTATAAAGAAATTGGTTTTGGTGATATGTGCCCTGTGACCAATTGGATTAGAGGCATTTCTTCTGGCTATTATTAAGCTAACTTGACTATTGCCCTTGTGTAGCTAAGCATGATCAAAATATAAAGTATGGGGAAGCATCTCAATTATGAACCATAGTACAGTGCTCCTGCAGACTACATTCTTCAGTTCATTAGGAAAAAAAAGCTTCAATGACTAGTAATACTATCAAGAAAGGGCAGAATAATAGGCATAGGATCAAGGATACTGTAGCTCATCCACAGGAGTTACAAAGGCTACTGAATGAC ...x.....:.--.:.:...xx..:::.x:....-....::x....:---.....----..:.......x..x..xxx.x..-....:.x:....-..:::::.:-:..:xx:.::..xx....x....:x..:...-...xx...:x.:xx..:........:..:.x..:.x.::.......::.x:x....:.....x...:...........--------------.:x:.........xx.:.-......x...xx.....:.x..xx..:xx..::x::.x...:.....:x:xx:.:..:.x.x..x.....:.x::.xx:.::...-.:....:..x..:....-x..::.............:.:..:.--.x....x.....:....::.:-----------..:::x..x:...xx:..........:---:.x.x:........:.::...-:.:x.x....:.:x::.:.x.:.:.:xx:x..x....:x....x..:....:..:x.:....:::...:x:..x.......----.:..x.x::x:..:.x.::.:..x.xxx..x:.............x:....:.:x.:..:..--..:......:.x.:x:.....:.x.x.x::.....:::x...x.xx..x:x...:...x:...:...........:.....-...x.x.:.x.:.......x.x::x.:.:....xx:...:..::x...:.:...:..xx..x.x.:...............:.x.:.......................:..:x...................................:.................:..:...x...:-.....x................:............x...:....................::..................:..........:...................................:.....-...........-.::............x:......:..-......x...............:...:.:x.......x:......x...............................xx...:.................:...........................x......x...........::.:...::.:...............x...:.--::.x.:::.......:xx...::x:.:x..xxx.:x...:-----x.:...:..------------...:x.x....---..:....::x..x:x..x.x:....::x...:....:..xx.:....:..x:..x..x...:.::.xx.x.-..........:xx.:xx:...... 11M2D21M1I12M3I5M4D23M1I12M1I9M1I31M1D78M14D18M1D85M1I17M1I25M2D21M11D27M3D21M1I81M4D62M2I81M1D179M1I133M1D11M1D26M1I179M2I40M5I9M12I11M3I71M1I24M 957/1323 72.3% 1360/94230402 0.0% 82/1323 6.2% 105851756 84362799 +3594 chr4 + 190214555 134290183 134290182 134290260 78 TATACCATAATTGTGTAA----AATAAAATATTAGTTAAGTCTTTCATGAATTATTAAATATATTGATTTTGCTATATGTAA chr4 + 94230402 28423508 28423507 28423589 28423508 28423507 28423589 82 TATACAATACTTATCTAATTAGATTGAAATATTGGTTAGAATCTTTATGAATTATTTAATGTATTGATTTAGTTATAAGCAA .....x...x..:.x...----.x.:.......:....::x::..:..........x...:.........x.:....x.:.. 18M4I60M 59/78 75.6% 82/94230402 0.0% 4/78 5.1% 105866675 84347880 +4465 chr4 + 190214555 134298359 134298358 134298557 199 AACATTTAGCTCTTTTTAATAAAAATTTGTATAGGGACTTGTTTATAAGCACAATAAACTATTCTG----TGTGTGAATTATGGGGTAACAATTCACACCTTGTGCATTAAATGGAGCTCAG--TATGATCTTATGTCTACCCATGCAAAGGATGTGAATTATTACATCATCATTCACATCCTGTTGTGTTGTGCTTCTTAAATA chr4 + 94230402 42037851 42037850 42038050 42037851 42037850 42038050 200 AATTTGTAACtttttatcat-----tttaaaaagtaatatttttacaattattataatatGATATAGCATTGTTTAAATTACAGCTTAACAATTCATTCCTGCAGCATTCAGTGGCACCAGGCCTTTGGCCTCTTGCCTAACAATACACTAGACAAGAATTATTACATTGTAATTCACACCCTGTCATGCCTTATTGCTTAATTA ..:x.x..:..:...x.x..-----...:x.x..x:.:x.x....:..x:.:x....xx.:x.x.:----...x.:.....::.xx..........:x...xxx.....x.:...x:.:x:.--.x..::..:x..:...x.x..:..xx:..::x............::.x.......:.....::..::x.::.x.....x.. 20M5D41M4I52M2I81M 122/194 62.9% 200/94230402 0.0% 11/194 5.7% 92260508 NA +21287 chr4 + 190214555 134306137 134306136 134306627 491 CTTCTCAT-ATAGCAACCTATCATTCAGGCAAAGAAAACATGTCTAAGATTAATGAAGGTCACCCTAACCCAAGTATTTTGATATTTTTGGAGCAAACAGAACCAAAAAGTAAACAGGCAAAAA-GTCAATCTTTAAGCCAACAATGATAACAGGAT---ATGTGTAAATAAATGGTTATTATAACTTTTTTTTTAATACCAAAACAGGCAAAATAAAAATTTCAAAACCTTTCA-TAAGGCCATGGGGCAGATAAAGACAGGAGAAGTCTAATTGCAATATATCCTGTAATGGAATCACCGTCTGTGTAGAAGCTGATTAAGGTTAATTTGAATCACATCAATTTGAATTAATGTGGCCTTTGCAGAATGAACAACACCTTAGTGCCAACATGATCAATTAGTACTTTTAACTCCATACATCCGCCTAGAAAGGTTAGATTTATTAGTTTTCAAGATAAC-------ATATTAGAATGCAAATCCATGTTACTTCATTTTTCT chr4 + 94230402 28430440 28430439 28430916 28430440 28430439 28430916 477 CTTCCCACCATGACAGCATATCGTTCTGAGAAGTAAC---TGTTTGAGGTTAATTCAGATCACATCAATCTGTATTACTTGACCTTTTCAGAATAAACAGAACCAAAAAGTGACTACACAAAAAAGTCAATCTTAAAGCCAATTACACTAATAGCATCTGATGTGTAAATGGGTGtttattat-----------taa-------------aaaataaaaaaataaaatCACTGCAATAAAGCTGAGGGGCATTTAAAGACAGGAGATGTCTAATTGTAGCATATCCAGTAATGAAATCACAGTCAGCCTAGTCACTGATTAAGGTTAATTTGAATCACATCAATGTGGATTAACTTGGCCTTTGCAGAATGAACAACACCTTTGTGCCAACATGATCAATTAGTCCCCTTAACTTCATACGTCTGCTTGGAAAGGTTAGATTTATTAGTTATCAGAATAACCACTTGGAGATTAAAATCTCAGttttctttgcttttttttttt ....:..:-..::..:.x....:...x.:x..:x..x---...:.:..:.....xx..:....x::..:.::x:.xx:....:x....::..::.................:.x:.x:......-.........x.......:x.::x...:..x..---..........:::..x.......-----------...-------------..........xx.x...x.x:.x..-...:..::x......xx.............x.........:.::......x......:......x...x.:x...xx:..............................x..:.....:x...........................x.....................x.::......:.....:..:..:.:.....................x...::.....-------.x....:...x:x.:.::x:x..:...:x.....:. 8M1I28M3D84M1I32M3I23M11D3M13D25M1I225M7I36M 354/464 76.3% 477/94230402 0.0% 40/464 8.6% 105875697 84338858 +3061 chr4 + 190214555 134312276 134312275 134312317 42 ACCATATATATTATATATACATATATATACACACATATACAG chr4 + 94230402 30834196 30834195 30834237 30834196 30834195 30834237 42 ACAATATGTATTATATATATATATATACACACACACACACAG ..x....:...........:.......:.......:.:.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 103478080 86736475 +3047 chr4 + 190214555 134314280 134314279 134314338 59 GCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCGGGAGAATGACGTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:.........:..:........x.xx.x...xx..x......::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 58281074 NA +3302 chr4 + 190214555 134316779 134316778 134316837 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 58283573 NA +3320 chr4 + 190214555 134331393 134331392 134331477 85 AGTGTACTTGTATGTGAGTGCATGTGTATGGTGTGTGTGTGTGTGCATATATATATATGCATATGTATATATATATGCATATGTA chr4 + 94230402 6083143 6083142 6083223 6083143 6083142 6083223 81 AGTGTTGATATATGCTTCTCCCTATATATGGTGTGTGTGTGTGCGCATACACAAA----CATATATATATATATTCTTACATGTA .....xxx.:....:xxx.x.x.:.:.................:.....:.:.x.----.....:.........x:x:.:..... 55M4D26M 59/81 72.8% 81/94230402 0.0% 4/81 4.9% 128248250 61966305 +3076 chr4 + 190214555 134361996 134361995 134362070 75 TCCGTCTCCACAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAGCTGAAAA chr4 + 94230402 51472479 51472478 51472553 51472479 51472478 51472553 75 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGA ...:...:::....x.x.x...::......:x...x...:.......x.:.:.......:x..:.x.xx...::. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 82889517 NA +3098 chr4 + 190214555 134362001 134362000 134362062 62 CTCCACAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAA chr4 + 94230402 49163128 49163127 49163189 49163128 49163127 49163189 62 CTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAA .....x...:...............:..x...:xx.:.x.:.:.::.......x:.x..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 85198873 NA +3440 chr4 + 190214555 134362002 134362001 134362060 59 TCCACAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1494993 1494992 1495051 1494993 1494992 1495051 59 TTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA .:..x::...x.:.........x.:...............:.:..:...:.....x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 132867009 57347546 +3101 chr4 + 190214555 134362006 134362005 134362077 72 CAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAGCTGAAAATGTACTT chr4 + 94230402 1494995 1494994 1495066 1494995 1494994 1495066 72 CAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACTT ..:::...x.:.........x.:....x..........:.:..:...:.....x.x.xx::.:.:xx..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 132867011 57347544 +3212 chr4 + 190214555 134362007 134362006 134362061 55 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAA chr4 + 94230402 90030076 90030075 90030130 90030076 90030075 90030130 55 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAA ...x.......xxx:...::..............:.:.:............x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 44331931 NA +3253 chr4 + 190214555 134362007 134362006 134362059 53 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 132867007 57347548 +3000 chr4 + 190214555 134362009 134362008 134362061 53 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAA chr4 + 94230402 1495004 1495003 1495056 1495004 1495003 1495056 53 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA .:.........x.:......x.x......:.:..:...:.....x....::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 132867005 57347550 +3324 chr4 + 190214555 134383841 134383840 134383924 84 ACATGGTGGCACGTGACTGTGATCCCAGCTACTTGGGAGGCTGAGGTAAGAGAATCACTTGAACCCAGGTGACAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....::.::.--...::.:...........::........x:xx.x...x.............:x.x:xx:..:..:.. 15M2D67M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 58350645 NA +3058 chr4 + 190214555 134386607 134386606 134386700 94 TATACATATTATATGTGTGTATATATATACACACACATAGATATATGTATATATGTGTGTATGTAT-ACAATACTCCAATTCTTACTTCAAAGAT chr4 + 94230402 40402331 40402330 40402423 40402331 40402330 40402423 93 TATACACGGTGCGTGTGCATGTATATATCCATACAGATAGATATAGATATGCATGTGAACGGGTATCATAATGGTC--ATTCCAGCTGGAGAGAT ......::x.:::....::.:.......x..:...x.........x:...::.....x:::x....-.:...:x..--....:x:..xx.:.... 66M1I9M2D17M 62/92 67.4% 93/94230402 0.0% 3/92 3.3% 93984276 NA +3133 chr4 + 190214555 134387472 134387471 134387515 44 TATACAATTTATTTTATATATATATATATATATATACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ........x.:.x.................:.:.:......... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 103553279 86661276 +3201 chr4 + 190214555 134387474 134387473 134387520 47 TACAATTTATTTTATATATATATATATATATATACACACACACATAT chr4 + 94230402 41650583 41650582 41650629 41650583 41650582 41650629 47 TACATTTCATTAAACATATATATATATATATACACACACACACGTAT ....x..:...xx.:.................:..........:... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 92736891 NA +3155 chr4 + 190214555 134387549 134387548 134387609 61 TATACAATTTATTATATATATACACACACACATATATACACACACACATAGATATATGTAG chr4 + 94230402 58675386 58675385 58675446 58675386 58675385 58675446 61 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAG ..:...x:..xx...::.....:.:....x.....:.:.........x:.:......x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 75712163 NA +3322 chr4 + 190214555 134458160 134458159 134458272 113 GAAGGAAGAAAAGAAGAAAAATAGGAAGAAAGGAAGAAGGGAGAAAGGGGTGGGAAGAG---------AGGGTAAGAAG--GAAG-----GAAGGAAGGAAGAAAGGAAGGAA--GGAAGGAAAAAAGTAA chr4 + 94230402 84536578 84536577 84536708 84536578 84536577 84536708 131 GAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAA ...:...:....x..x............x:.:...:..:..::..:..:.x..:.::..---------.:::.x..x..--....-----:.::...:..x:..x:.....:.--..:.....:.:.x... 59M9I11M2I4M5I23M2I16M 78/113 69.0% 131/94230402 0.0% 18/113 15.9% 49921582 NA +4748 chr4 + 190214555 134472361 134472360 134472684 324 AAAATGTTTTTTTAAAAAAG--AGGGAAGGTGAGAGAAGAAAGAGGAAAGAAAGAAAGGGAAGA-AGGAAGGAAAGGAAGGAAGGAAGGAAGGAAGACAGAAA-------GAAAGAAAGAGAGAGAAGGAA---GGAAGGAAGGGAAAGAGAAAGAGAGAGAAGGACGGAAGGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAA-------GGAAAGAAGGAAAGAAAGAAAGAAAAAGAGAAAGAGAGAGAGATAAAAGAAACAAAGAAAATTTTTA chr4 + 94230402 23739994 23739993 23740335 23739994 23739993 23740335 342 AAAATTTATTTTGTAAGATGTAAGAGGAGATGGAAAGTAGTTGAGTAGCTCAAAAAAGGAATTACAGGAAATATAGGGAACAAGGGAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAAAGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAGTAACTATGACTGCGGGAAAAGAAAAGTGGGACAAGTGACAGCATGTGAACAAAATTATTTGTTTGAGAAGAAGCAAAGAAAGAA--GAGCTTGGGAACATCTAGCTATGGAACAAACAAGAGAGATCTTCA .....x.x....xx..:.x.--..:.:..:..::.::x::xx...x.:xxx..:.....:.xx.-.....:x.x...:.:x....:.:x...::..xx...:.-------...x.:x.:x.:x.....:..---:....x..::.x..x..:xx:.x..:xx.:.:::..:......:..:...:...:....:.x.x..:..x.x.......x..xx.x..xx.x::....::..:.:x.::.x..:x:.x:.x:x:x...x:...xx.-------.::......x..........--:.:xxx:.:..x.xxx..xx..::..x......:::.:..:..:. 20M2I42M1I38M7I21M3I136M7I20M2D45M 188/322 58.4% 342/94230402 0.0% 22/322 6.8% 110732367 79482188 +5268 chr4 + 190214555 134472382 134472381 134472649 268 GGGAAGGTGAGAGAAGAAAGAGGAAAGAAAGAAAGGGAAGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGAAGACAGAAAGAAAGAAAGAGAGAGAAGGAAGGAAGGAAGGGAAAGAGAAAGAGAGAGAAGGACGGAAGGGAAAGAAGAA---AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAAGAGAA chr4 + 94230402 24794184 24794183 24794443 24794184 24794183 24794443 260 GGGTTGGTAAAGGAATAAAAAGGACCAAAATA----GAAGATGGGAAGAGAGGCAGAAGCTTGGTGAAGTAGTCAGAAAAGAAGTAAGACCCATTACGAAAGAGTGGA-GAAAGAAAAAACAGAGTGAGGAA---AAGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGA--AAATGATAGTAGAAAAAGGCACTAAACAATTAGGGTTAAAAAGAAA-CAAGAAAGAATAAGAGGA ...xx...:.::...x...:....xx:...x.----.....x..:.:..:...x..:.:xxx:.x:.:.x..x......::...x....xxx.xx.x...:..:x.:.-.:..::.:...x....x..:.:.---.....x..:....:---...:.:.::....x:.:....:x.x..:..:...x.x.:.:...x::xx.:.--...x:.x::x.....:::.x.xx...x..xx.:..xx.:..:....-x.........x.....:. 32M4D72M1D23M3D14M3I52M2D46M1D18M 161/257 62.6% 260/94230402 0.0% 14/257 5.4% 109678198 80536357 +3919 chr4 + 190214555 134472383 134472382 134472542 160 GGAAGGTGAGAGAAGAAAGAGGAAAGA------AAGAAAGGGAAGAAGGAAGGAAAGGAAG----GAAGGAAGGAAG----GAAGACAGAAAGAAAGAAA------GAGAGAGAAGGAAGGAAGGAAGGGA------AAGAGAAAGAGAGAGAAGGACGGAAGGGAAAGAAGAAAGAAAGAAAGAA chr4 + 94230402 2498472 2498471 2498657 2498472 2498471 2498657 186 GGGGGGTGAGGCGGGTGCGGGGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ..::......:x::.x:x.:...x:..------....:.x...::.:....x:.x:..:..----..x..x..x...----.:....:.::..x..x...------..x.::.:....:::.x.....:..------...:..:.:..::..::...x....:.x....x.........x:.::.. 27M6I28M4I12M4I19M6I25M6I49M 105/160 65.6% 186/94230402 0.0% 26/160 16.2% 131973911 58240644 +3211 chr4 + 190214555 134472520 134472519 134472593 74 GGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112179 41112178 41112252 41112179 41112178 41112252 74 GGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ......:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 93360341 NA +3115 chr4 + 190214555 134472535 134472534 134472616 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:..:.x....:.:..x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 93360357 NA +3404 chr4 + 190214555 134472541 134472540 134472652 112 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGA-AAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAA----------GGAAAGAAGGAAAGAAAGAAAGAAAAAGAGAAAGA chr4 + 94230402 54011593 54011592 54011722 54011593 54011592 54011722 130 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAA .:.:...:...x........x......:..:....-------....x.-..x......:.:x::...x.xx....xxx:...:..----------...:.:..:.x....:.x:...:....:.:...:. 35M7I6M1I36M10I35M 79/112 70.5% 130/94230402 0.0% 18/112 16.1% 80460948 NA +3718 chr4 + 190214555 134472549 134472548 134472722 174 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAAGAGAAAGAGAGAGAGATAAAAGAAACAAAGAAAATTTTTAAACTGTTACAAACATCAACTTTTTTTAAAAGAAATGGC chr4 + 94230402 54011593 54011592 54011755 54011593 54011592 54011755 163 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAACTTAATTCCGTTA-----------TTCTTTACAAAAGAATAGC .:.:...:...x........x......:..:....:x.xxxx::..x:x..x:.::...::x....:x:xx....xxx:...:..xxx.x::x.x:......:..x:.....::..:....x...:....x:..x.xx.:....-----------..:...xx...::...:.. 144M11D19M 99/163 60.7% 163/94230402 0.0% 11/163 6.7% 80460956 NA +4290 chr4 + 190214555 134472550 134472549 134472710 161 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAA-------------------GAAAGAAAGAAAAAGAGAA-------AGAGAGAGAGATAAAAGAAACAAAGA--AAATTTTTAAACTGTTACAAACATCAACTTTTTTT chr4 + 94230402 84536568 84536567 84536756 84536568 84536567 84536756 189 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAATTTACAACTAGCCATACTATCTAGTTTCTTT ...::.:.::........:...x..x:...:x.:...:x:......:..:...:.::..:..:......xx.x.x..x...-------------------:.:.......x...x....-------:...::......x..::.::....:.--...x...xx....:x:xxx.x:...x.x...:... 81M19I19M7I26M2I35M 107/161 66.5% 189/94230402 0.0% 28/161 17.4% 49935982 NA +3026 chr4 + 190214555 134472570 134472569 134472620 51 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGA chr4 + 94230402 44508578 44508577 44508628 44508578 44508577 44508628 51 AACAAACAAAGAAAAAAAGACATGAGGAGAGGAGAAGGAAAAAAAAAAGGA ..x...x.......:.....x.x:.:..:.......:....:...:..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 89963992 NA +3049 chr4 + 190214555 134472585 134472584 134472630 46 AAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAA chr4 + 94230402 92115722 92115721 92115767 92115722 92115721 92115767 46 AAAAACAGAAAGAAAGGAGGAAGAAAGGCAAAAGGAAAGAAGCAGA ...:.x.............:.......:x.:...........x.:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 42356863 NA +4009 chr4 + 190214555 134501984 134501983 134502137 154 CCCCTTTCCCCCCATCTGCCCCCCTTCCCCCTGCCCCCACCTTCTCCCACCCCCTTCCCCTCCCCTGCCTTCCTCCCCCTTTTCCCCCCCTTCCCCTCCCCCCGTGGGCTCCAATGCAGCCCGAGCT--TCCCTGACGGGCACCGCCC-----CCTGCTCT chr4 + 94230402 929192 929191 929345 929192 929191 929345 154 CTCCTTTCCATCTCTCTCTCCTCCCTGCTCCTTCGTACACATCCACTCACTTGCTTGTCACTCCCTGGCTTGCTCCTCCTTTCCCCATCTGCTCCTTCCTTCC-------CCACTGCTGCCCATGGTGCTCACCCACAGCCACAGCCCCAATTCCTGCTCT .:.......x:.:x...x:..:..:.x.:...x.x:x...x.:.x.:...::x...x:.x::.....x...x....:.....:...x:.:x::..:...::..-------...x...x....:x.x.--..x.:x..:.x...x....-----........ 103M7D17M2I19M5I8M 96/147 65.3% 154/94230402 0.0% 14/147 9.5% 133572792 56641763 +3104 chr4 + 190214555 134518360 134518359 134518411 52 TTAAGCTAAATTGTTTTTTGTTTGTTTGTTTGGTTGGTTGGTTTTTGTTTTG chr4 + 94230402 45580277 45580276 45580328 45580277 45580276 45580328 52 TTAGTTTAAGTTGCGTTTTTTTTGTTTGGTTGGTTGGTTGGTTTTGTTTTTG ...:x:...:...:x....x........x................xx..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 88938083 NA +3131 chr4 + 190214555 134518362 134518361 134518410 49 AAGCTAAATTGTTTTTTGTTTGTTTGTTTGGTTGGTTGGTTTTTGTTTT chr4 + 94230402 32402276 32402275 32402324 32402276 32402275 32402324 49 AAGTTTTATTGCTTTTTGTTTGTTTGTTTTGTTGGTTTGTCTTTTTTTT ...:.xx....:.................x.......x..:...x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 102116086 88098469 +3181 chr4 + 190214555 134518370 134518369 134518413 44 TTGTTTTTTGTTTGTTTGTTTGGTTGGTTGGTTTTTGTTTTGCC chr4 + 94230402 31166936 31166935 31166978 31166936 31166935 31166978 43 TTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTT-TTTTGCC ..x...............x.................-....... 36M1D7M 41/43 95.3% 43/94230402 0.0% 1/43 2.3% 103351434 86863121 +16588 chr4 + 190214555 134538946 134538945 134539345 400 TTTGATTATTCAACACATGTTCTCATAAAATTGAGCACATA-CTGATATAAAGGTAGTAATAGAGCAAGTAGGTATTACATAGCACAACTCCTCAAGGTAAACAAGGATGGGTAATTTAATTTCCAAGGTGACAAATTATGTTATCATGAGAGAGCAGGCAATTTCTTCCCCAAAATAAACTAAGTAGGCCAGGACAGCTTTAACTAGATGAAATCATTATCCTTTTAAAATACACAAGTGTTGAATAAAGTTAGTTTTCTCTGCTTTAGTGTCTTGGTAGAAAATGGCATAAGAAAACAGTGC------TGCCTTAAGGTAATGTTCACCTGTTTAAATTCTTCAGTAAGGGAATAAAAACAGTATTACTTT-----------------AAAAAAAAATACAGGTGTGTATACACACATATAT chr4 + 94230402 28532267 28532266 28532687 28532267 28532266 28532687 421 TCTGATTACACAGAACATATTT--GTGGAGTAAAGTGTATTTCTGATTTAAAGAGTGTAATGTAACAAATAGGTATTATATAGTATTCCTCTTCAAGGTAAACTGGGATGGATAATTTAATTTTCAAGGCAACAAATTATCTTATCATGAGTGAACAGGCAATTTCTTCCCTGCAATAAACTAAGTAGGGACAGACAGCTCTAACCAGATGAAATCATTATCCTTTT-TAATGCAGAAGCATTGAATAGAAGTAATTTTCTCAGCCTTAGTTTTACAGTAGAATGTAGCTCGTGAAAACACTGCACACTGTGGTCTTAGGTAGGAGCAACAAGTTTAACCCTTTTGGTGGGAAAAGATAAACAGTGTTATATTATACAGATGATTAAAGGAAAAATAATCACACGTGTAAATAAAAAtgtatgt .:......:x..:x....:..:--:.::.:.x:..:::..x-.....x.....:xx.....:x.:...:.........:....:.:xx...:...........x:......:...........:.....::.........x..........x..:................::x...............xxx:.......:....:.....................-x...:..x...::.......:.:x..:.......x..:.....x.:x::......x:.:..x::x.......x...------..x::.x.....:x:x:x..xx......x:::..::..::.::..x.x.......:...:x..-----------------.....x..x:...x....:x...x.x.::...:. 22M2D17M1I185M1D76M6I63M17I34M 286/397 72.0% 421/94230402 0.0% 27/397 6.8% 106006679 84207876 +3096 chr4 + 190214555 134545890 134545889 134545959 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 58512693 NA +3216 chr4 + 190214555 134556373 134556372 134556460 88 GTCTTTTATGCCTAATAGGAAAACAAAAAGAGTGAAAGAAAGAAAAGAAGGAAGGGAGGGAAAGAAAGAGAAAAAAGAAAAAAGAAGG chr4 + 94230402 1500685 1500684 1500772 1500685 1500684 1500772 88 GTCCCTTCTGTATGTGGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGG ...::..x..:x.:xx:....:.x..:..::...:::.:.....:x..:..:.:.....:...:..x::.....::::...x..::.. 88M 53/88 60.2% 88/94230402 0.0% 0/88 0.0% 133055688 57158867 +3319 chr4 + 190214555 134556413 134556412 134556491 79 AGAAAAGAAGGAAGGGAGGGAAAGAAAGAGAAAAAAGAAAAAAGAAGGAGCT--------------CTTTCTTTCAGCACTGGGAAAAAATAA chr4 + 94230402 44840876 44840875 44840967 44840876 44840875 44840967 92 AGAAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAA-AAAAAGCTCTCCCCGTATGTCACTTTTTTTCCCCGCCAGGGGAAAAAAA .......::..::...:.....:....:.:.......:.....-..::....--------------....:....xx.:.::..::....x.. 43M1D8M14I27M 58/78 74.4% 92/94230402 0.0% 15/78 19.2% 89715537 NA +3482 chr4 + 190214555 134567821 134567820 134567986 166 ATAGTATATATT-TTATATATATAAAATTTTATATATATAATATATATAACATATATTATATATTATATAATATATTATATATAATATATAATATATGTTATATATATTATATATATTATATATTATATATTATATATATTATATATTATATATTATATATATTATA chr4 + 94230402 26320199 26320198 26320344 26320199 26320198 26320344 146 ATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAAT-----CAGCTTAAATT-------------TATCTCACATGTA---TATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ...:x....x..-......:...xx..x.x.xx....x....-----:.:.x..x...-------------...x.:.:..:..---....x..:..:.........:......:.x.....x.xx...:.xx:xx...x.....x..xx:....:.....:.x... 12M1I29M5D11M13D13M3D80M 103/145 71.0% 146/94230402 0.0% 22/145 15.2% 108247622 81966933 +3775 chr4 + 190214555 134567872 134567871 134568017 146 TATATTATATATTATATAATATATTATATATA-----------ATATATAATATATGTTATATATATTATATATATTATATATTATATATTATATATATTATATATTATATATT--ATATATATTATATATTATATATTTATATATATATATATATAAT chr4 + 94230402 26320189 26320188 26320343 26320189 26320188 26320343 155 TGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAAT-CAGCTTAAATTTATCTCACATGT-ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA-GTAT-TGTATATGTAAT .:.:.:..xx..x.x...x.x.x......:..-----------....x....-:.xx...x..x...:x:.:..:.-.....:..:............:......:x.......--x...:...:xx...x.....x....-:...-.:.....:.... 32M11I9M1D23M1D37M2I25M1D4M1D12M 105/142 73.9% 155/94230402 0.0% 17/142 12.0% 108247683 81966872 +3687 chr4 + 190214555 134567881 134567880 134568020 140 TATTATATAATATATTATATATAATATATAATATATGTTATATATATTATATATATT-ATATATTAT-ATATTATATATAT--------TATATATTATATATTATATATATTATATATTATATATTTATATATATATATA----TATAATTTT chr4 + 94230402 26320179 26320178 26320326 26320179 26320178 26320326 148 TGTAATGTAGTGTGTCATTAATAAAATAT----TTTCTTATATGTATT-CAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTAT-TATGTATCTAATAGTATATTTTT .:.x..:..:.:.:.:..xx....x....----.x.x......:....-:.x..:..-....x.x..-.xx...x..x...--------......:..:............:......:x..........-...:...x..----....x.... 29M4D15M1D8M1I9M1I13M8I41M1D10M4I9M 104/134 77.6% 148/94230402 0.0% 20/134 14.9% 108247702 81966853 +9264 chr4 + 190214555 134569252 134569251 134569616 365 CAAAATATCTAAACTAGTTTGTTCTAACAAAGGTAAATGTGCCACAGATCACTGAA-AAGATTTAA---------TGAGATTAAATCAAATTAATTATAACTGTATCTATGGCATTAAATCCCCCAAA-CTGCCTCCTGGCATTGCAGAGACCTTGGCATATGTGAGTTTAGGTCACAGTACTCAAAATCAAGAAGCTGACAGGTTAGATTTTCTTCCTGAGATTTCGCTCATTAGCCATACCAGAATATTTAGTACATCAGGCCACTCAGCTTGAATTCCCAAACAACACATGACTTTGGAATATGATCCC--TTGATAACTCATTGAAAGTGTCTAAATACATGTAC-CTGGCATAATAGGCCAAGGATGACAATTT chr4 + 94230402 28552598 28552597 28552959 28552598 28552597 28552959 362 CAAAATATTTAA-CTAGCATACTCTAA----GGTAAGTC--------ATCATTAAATAATAGTTCAGGGCACTGCTGAGGTTAAGCCTAAATCATTATAGTTGTTTCTCTTGCTCCAAACTCCCCAGATCTCCCTCCTGGCAGTGCAAAAACCTTGACAGCTATGGGCTTAGGTCACACCATTTAGAATCAAGGAACTGTCAGATCTCGTTTTCTTTTTGCTATTCTGCTCATTAGTCAAAGCAGATTCTTTGCTGCAGCAAGCCTGTGTGC-TGCATCCTAACCCAGTACAT-CCTCAGGAATCTGATCCCAGATGATCTGCCAT--ACAGGGTGAAAATATCAGTGCTCTGTCACAATAACCCAACTGTAACATCTT ........:...-....:x.::.....----.....:.x--------....:.:..-..x.x..x.---------....:....::.x..x.x......::...x...x.x..x::...::.....:.-..x..........x....:.:......:..xx.:..:.:..........x:.:.:.:.......:.:...x...:.:xx:.......::..xx...::.........:..x.x....x.x...:x.:..x..:...xx.xx..-..x..:.:x.xx..::....-x..:x.....x.......--x....xxx:...--.x..x..xx.....:xx..:.-...x..:....:x....xx:.:...x:.. 12M1D14M4D8M8D9M1I9M9I53M1I143M1D20M1D18M2I12M2D21M1I29M 241/348 69.3% 362/94230402 0.0% 31/348 8.9% 106016654 84197901 +24646 chr4 + 190214555 134580949 134580948 134581613 665 CTTTCTCTTGATGGATAGATGGTGTCCTAGATCTTCTATGGATTGACTTAAAAATACTTTCATTCTTATCTCTGAATAAAACAGAGATTATGACCCAACTGTCATGTAACAGGAGGGATCATCTGTCTTTTCTTTTTTGAGTCAAGGG-ATTTTGGCAGGAACATAATATTCCCTTCAAAATCAGTTTGTTCTCTTGACTTTCTTT---------------------------ATAGACTCCATTTATCTGTTTTT--TCCTACTCTACAGTCTTTAGGCCTCCAGACTGATGAGATCCTAATTCTTTTGGCATGCTGTCAACATGTCCCACGCAGAATAACTATTAAGTCTTTGCTTTTGTTATTCCTCTGCAATTTTGTTTCCCTTTCTGTGCTTCTTGCC---TCTTTGTGATTTTCACCTATTTTGCCTCAAGCTATCTCCTGACAATGTGTTACCACCTCTCTTTATGAATTTGTTTCTTCTTTGCCCGGGTAATTTATTTTAGTCTC--TTTCCTTATCCCTGCCCTACCCCACTCATAATCCAATATATTGATATTTTTATGTA-AACATTTTTTAACATTTCAATTATTTATCGTGAATATTCAGAACAATCAGACATTTTCTTCTG--TCTTAACTCTTCAAATAATACAT------------TCTTTAA--GACTGAGAATCTTTGCTTATAAACATTCATATTGCA chr4 + 94230402 28555172 28555171 28555865 28555172 28555171 28555865 694 CTTCCTTGAGGTGGACAAGCACTGCTCTGTATTTTCAAAAGGTAGTTTTAGAAATGGAGGCAACCTTATCAGTGCA---AAAGGAGATTATGACCCAGCTGTCATGTACTTGTATAAAT--TCTGTCTCACTCTTTCTGTGTCAAGAGTCTTTTGGCAGGAACATAATATTTCCTTCAAAATCAGtttgttctttttttttttttttttttttttttttttttttttCCCCTCATATATTTCATTTATCTGATTCTACTTCTACGAAACAGTCCTCAGCCCTGCAGACTGATTAGATCCTAATTCTTTTGGCATGCTGTCAACTTGTCCTAGTCAGAATAACTATTAGGACTTTGCTTTTGCTACTCCTCTGCAATTTTGTTTCCCTTTCGGTGCCTCATGTCTTTTCTTTGTGATTTTCACCTATTTTGCCTGAAGCTGTCTTCTGACAATATGTTACCACCTCTCTCTGCGGATTTGTTCTTTGCCTGCCCAAGTAATTTATTTATATGTTAGCTTCCTCTTCAC--------------CATTATCCAGGCTGTTTGACTTTGTGTGTATTGCTTTTCATAGTGCCTCAAATCTCTA----GGATGTTATTAACAATTTGAAAGGCTTTTGTAGTTTTTAATGCAACAACTTAATCATGCTGACTGGGTGTTTTTAAATGACTGAAATTCCTTGTGCATACACACTGAGATAACA ...:..:xx.:....:.::::x..::..:x..:...x.x:.:.x.x:...:....:xxxx..x:......xx..x.---..x:..............:..........x:x.x.x::..--.......:x:::...:..x......:.-x.....................:.....................:..xx:...:...---------------------------...x.:.:..........x..:.--.:....xxx......:.:..x...x.........x..............................x.....:.xx..............:.x...........:..:.........................x....:..x..:.---...........................x.....:...:........:...............:.::.:.......::..x::.....::...........xx:.x.:--:.....:x..x.--------------...x.....:xx.:..x:xx...x.:....-x:.x...:x..:::::....x.x.:..----.:..:..xxx......:x..x.xx:.:..x.:--.:....:x.xx...x.x.xx...------------.:.....--......:.x..:...:x:...x...:.x.x..x:.. 76M3D40M2D27M1I57M27I23M2I145M3I107M2I12M14D30M1I27M4D32M2I23M12I7M2I36M 473/642 73.7% 694/94230402 0.0% 75/642 11.7% 106025777 84188778 +3024 chr4 + 190214555 134587959 134587958 134588021 63 TTATCTCTGCATACTGATACACACACACACACACACACACACACACACACACACACACACACA chr4 + 94230402 54963192 54963191 54963254 54963192 54963191 54963254 63 TTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACA ..:.x.x.x.....x...:.....x:.:.:...........xx...:::.:.x..:....... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 79624767 NA +3061 chr4 + 190214555 134588469 134588468 134588514 46 TTTTGTTTGTTTGTTTGTTTTATTTTAGTAAAAGGAAAAGAAGATG chr4 + 94230402 66518751 66518750 66518796 66518751 66518750 66518796 46 TTTTGTTTGTTTGTTTGTTTTATTTTAGTACACCTAAGAGAGGGTG ..............................x.xxx..:...:.:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 68069718 NA +3033 chr4 + 190214555 134589284 134589283 134589351 68 TACATACACACACACATATATACATATATACATATACATATATGTATATATATATACACATATATCTA chr4 + 94230402 41749096 41749095 41749163 41749096 41749095 41749163 68 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCA ..:...x.......:...x:.x:....xx::..:.:.:...:.:..:...:..:...:.x......:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 92840188 NA +3417 chr4 + 190214555 134590966 134590965 134591046 81 ACATACATATGTATATGTGTGTATCTATATTATATATACACATATATATGTATATGTGTGTGTATATATATGTGTGTGTAT chr4 + 94230402 32744950 32744949 32745030 32744950 32744949 32745030 81 ATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT .::....:x.:.x...x.:.::.....:.xx.....x.:.....:...:::.:.x.....::.:.:.:.....:...:... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 101846016 88368539 +12682 chr4 + 190214555 134594839 134594838 134595096 258 AGTTGAGTTTATACATTTGAAA-------TTAACATTTGTCTTGAATCCTGTTGATCT-TCCAACCTTGTTTTTGCTAAATATGGGTCTATCTTCAAGTTAATGCATAATTTTATACTCTGTGGGCTTAAATTGAATTCCAAATAGCTTCAAAAGCTAAAATTAATTGCAAAAATGAAAAGAAGACACACATCAAAG---CTTCATTTTTAAAGTTGGTATCTACATAG-CATTTTATACCCATTTAAAACTGTTAG-----CTTATCCCTTATT chr4 + 94230402 28562864 28562863 28563137 28562864 28562863 28563137 274 AATTAAGTTTAGATATTTGAAAACTTAAATTACCATTTTTTTTCAAGCCTGTTGATCCGTATGACCTTGTTTGTGCCAAATATGGGTCTTTGTGCAAGGGAAGGCACAATTTTATACTCTATAGGCTTAAATTAAATGCCAAAGAGCTTCAAAAGCT-ATTTTAATTGCTAAAATGAAAAGATGACACCCATCAAAGAATCTTTATTTTCCATGCCAATGCCTGCATAGTTTTTTTATATCCATTTAAAGCTGTTAGTTAGACTTCATCCTTATT .:..:......x.:........-------...x.....x.:..x..x..........:-.x::.........x...:............x.x.x....xx..x...:.............:.:..........:...x.....x.............-.xx........x............x.....x........---...:.....:x.x.::::.::..:.....-:x.......:.........:.......-----...xx:....... 22M7I29M1I98M1D39M3I29M1I27M5I13M 207/257 80.5% 274/94230402 0.0% 18/257 7.0% 106031975 84182580 +9780 chr4 + 190214555 134614393 134614392 134614664 272 GCTTATACTAATAAAGTCATTATATCCTAAAAATTATAACACACAGTATTTCTTTCGCTGTTCATTTTGATTAACC-AAATTGTAA----------TTTGTATAAAATGACTGAAATGCTTTCAGGGGAATATTTTTATCTTTGATGAAAGTTTTATTAAACTTCCAACAAAA-GTATT-CTTATTAAAATTTTATAAGATAAAAAATTTATCTGCATTGTGTTTGAATCATTACTTTCAAATAACTGTCACCAATAAACTGTTAACACAA-ATTCATTCTCAGAA chr4 + 94230402 28569995 28569994 28570279 28569995 28569994 28570279 285 GCTTGTAAAAGTATAATTATCGTATCCTAATAATTATAACAGACGACATTTCTTTTCCTCTTCACACTGTTTGATCTAAACTGCAAATTTCTGATCTTCTTGTCAAA-GACAGAGCTGTTTTCTTGGGAATATTTTGAACTTTGATGAAAGTTTTATGACACTTCCAACAAAACATGCTGCTCATTAAAGTTTCATAGAGAAAGAGCTCTATCTGAATTGTTTTCGAATTGTAAATATCTCATAATTGTCATCAGTGAGTAGCTGATGAAATACCTGTTCCCAGAA ....:..xx.:..x.:.:..::........x..........x..:::........:x..x....:x:..x..:.:.-...:..:..----------..:x.:.x...-...x..:x..:....xx...........x.x..................x.x.............-:.::.-..:......:...:...:::x..:.:x.:......x.....x..:....::.x.x.x..xx....:.....:..:.:.::x.:.:.::x..-.::::...:..... 76M1I9M10I11M1D65M1I5M1I91M1I14M 191/271 70.5% 285/94230402 0.0% 15/271 5.5% 106044398 84170157 +3601 chr4 + 190214555 134637363 134637362 134637501 139 CCTTGTGGCTCAGAATA-CTCAATGTCTACAATTAATTACACAATAGTCGTATTTTTCTGGATAGGTATTCTGTTTTTTTGTTTTGGTTTGGTTTTTGTTTTTGTTTGTGTTTTGAGACGGAGTCTTGCTCTGTCACCCA chr4 + 94230402 12151575 12151574 12151696 12151575 12151574 12151696 122 CCTTTTAATTCAGAATATCATTATGTTTGAAAGT-----CACATTTTTTGAGTTTTG--GGGTGGGT--------TTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTTTTGG---GGGTTTTTGTTCTGTTAGTCA ....x.:::........-.x:x....:.:x..x.-----....x.xx.:.x:....x--..:.:...--------.....................xx...........x.....:---..:x.:...:.....:.x:.. 17M1I16M5D18M2D8M8D41M3D21M 90/121 74.4% 122/94230402 0.0% 19/121 15.7% 122485788 67728767 +3353 chr4 + 190214555 134641149 134641148 134641211 63 ATATATGCATATA-TATACATACATATGTGTGTGTGTGTGTATATATATATATATATATAGAGA chr4 + 94230402 29797126 29797125 29797189 29797126 29797125 29797189 64 ATTTCTGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAA ..x.x....:..:-:........:....:......:......x.........:.:.:.x...:. 13M1I50M 49/63 77.8% 64/94230402 0.0% 1/63 1.6% 104844023 85370532 +3112 chr4 + 190214555 134641166 134641165 134641215 50 CATACATATGTGTGTGTGTGTGTATATATATATATATATATAGAGAGAGA chr4 + 94230402 29797140 29797139 29797189 29797140 29797139 29797189 50 CATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAA ........:..:..:......:.:.:..x.........:.:.x.....:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 104844026 85370529 +3309 chr4 + 190214555 134642228 134642227 134642341 114 TGTTCCTTTTTAGTGC-TGAG---TAGTGTTCCATTGTGTATATGTGTGTATATATACACACACACACACACACACACATATATACATATACATATATA--TACATATACATATATATAT chr4 + 94230402 7596560 7596559 7596679 7596560 7596559 7596679 120 TATTCTTTTATGATACATGAGAAATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACAT .:...:...x.::.:.-....---..:...xxx...:.:xx.x...x.:..:x....x.........::....x.:x............x...:.x.x.--.x..x:.......x:.:.. 16M1I4M3I75M2I19M 79/114 69.3% 120/94230402 0.0% 6/114 5.3% 127045668 63168887 +3068 chr4 + 190214555 134642233 134642232 134642301 69 CTTTTTAGTGCTGAGTAGTGTTCCATTGTGTATATGTGTGTATATATACACACACACACACACACACAC chr4 + 94230402 36111748 36111747 36111808 36111748 36111747 36111808 61 CTTTCCAGTGTTAAAGAACGT--------GTGCCTGTGCGTATATATACACACACATACACACGTACAC ....::....:.:.:x.::..--------..::x....:.................:......::.... 21M8D40M 46/61 75.4% 61/94230402 0.0% 8/61 13.1% 98530485 91684070 +3118 chr4 + 190214555 134642253 134642252 134642339 87 TTCCATTGTGTATATGTGTGTATATATACACACACACACACACACACACATATATAC--ATATACATATATATACATATACATATATAT chr4 + 94230402 54005679 54005678 54005767 54005679 54005678 54005767 89 TTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT ..x:....x::.:..:...:.x......:...:.............x.x..x.:.x.--x.::...x.x.xx.......::...x:... 57M2I30M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% 80636574 NA +3070 chr4 + 190214555 134642260 134642259 134642304 45 GTGTATATGTGTGTATATATACACACACACACACACACACACATA chr4 + 94230402 49483587 49483586 49483631 49483587 49483586 49483631 45 GTGTGTATGTGTTTATAAATACATGCACACACACACGCACGCGTA ....:.......x....x.....::...........:...:.:.. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 85158673 NA +3280 chr4 + 190214555 134644460 134644459 134644569 110 TTTTAAAGTTACGTAATTTTGAAATATATGTATATATACACATATACACATATATACATATACGTATATATACACATACACACATATATACACGTACGTCTATACACATA chr4 + 94230402 39329325 39329324 39329433 39329325 39329324 39329433 109 TTTTTCAGTTAAGTAGTTTTCTTTAACATGTTTACCTACACATCAGCATATGCTTATGTGTGCGTATGCATATACATACACCAACAGTCAC-TGTATAGCTATATACACA ....xx.....x...:....xxxxx.:....x..:x.......xx:..:..::x..::.:.:.....::...:........xx.:.xx:..-:...::x.....:...:. 91M1D18M 70/109 64.2% 109/94230402 0.0% 1/109 0.9% 95315135 NA +3142 chr4 + 190214555 134644465 134644464 134644521 57 AAGTTACGTAATTTTGAAATATATGTATATATACACATATACACATATATACATATA chr4 + 94230402 28777187 28777186 28777243 28777187 28777186 28777243 57 AAACTCTACAGTTTTGAAATGTATGTGCATATAGACATATACACAGACATATATACA ..::.x:::.:.........:.....::.....x...........x.:...:...:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 105867278 84347277 +4472 chr4 + 190214555 134645204 134645203 134645310 107 TATGTATATACACACATACATGTATATACACACACATATGTATA----------------TACACACATATACATATATGTATATACACACATATACATATATGTATATACACACATATGTAT chr4 + 94230402 68837028 68837027 68837150 68837028 68837027 68837150 123 TGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .:..........:........::x..:........::.x.xx:.----------------..x:x..:.:.:.:.:.:...:.:........x.......:..::.:..:.......x.x... 44M16I63M 76/107 71.0% 123/94230402 0.0% 16/107 15.0% 65808176 NA +3184 chr4 + 190214555 134645252 134645251 134645315 64 CACATATACATATATGTATATACACACATATACATATATGTATATACACACATATG----TATATACA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..:.:..:::..:....:...:x:.....:.x...:.....x....:...:.....----........ 56M4I8M 48/64 75.0% 68/94230402 0.0% 4/64 6.2% 88581954 NA +3110 chr4 + 190214555 134645400 134645399 134645503 104 ATATAAATATGCACATATACACGTATTTATATGTGTGTATATATACATAAATGTGTATATATATGTATATATACATATATAAATATATAGATGATGAACACAAT chr4 + 94230402 41749097 41749096 41749192 41749097 41749096 41749192 96 ATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATG--------TACGCTTATATCCATGTAAAGAAGAAGAGACGAAGGAAGCAGT .......:.::..:...x::x::...:x:......:....:........x...--------..:.:x.....x...:..x.:.x:x.x...:..x.:.x:..:. 53M8D43M 63/96 65.6% 96/94230402 0.0% 8/96 8.3% 92896303 NA +3435 chr4 + 190214555 134654781 134654780 134654875 95 TTCTATTGTATATTATAGCATTGTTTATGTAAAATATGTTACATATAAATAAATATAAACATATATTTAAAAATAAATACATAAATATTTCAAAT chr4 + 94230402 84272270 84272269 84272362 84272270 84272269 84272362 93 TTCCATTGTAAG--ACACCATTGTTCATGTTATGTATATAACATATGCATATATATAAACCTGCATATTCAGATAATTGTATAAATATGTAATAT ...:......x:--.:.x.......:....x.x:...:.x......:x...x........x.::..x.xx.:....x.::........x.x.x.. 12M2D81M 66/93 71.0% 93/94230402 0.0% 2/93 2.2% 50382511 NA +3047 chr4 + 190214555 134670112 134670111 134670161 50 ATTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGA chr4 + 94230402 49681673 49681672 49681722 49681673 49681672 49681722 50 ATTTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGA ...x.:.:.:x:.:.:.:..:..........x.................. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 84988439 NA +3836 chr4 + 190214555 134672329 134672328 134672430 102 ATTATAATTTTTAAAATAGTATAATTTCAATCCATAAAAAAAAAACTAAAGATATTTTTATGGAGCTTGCATAATTTTTTTTTTTTTTTTTTTGAGTTGGAG chr4 + 94230402 23997606 23997605 23997699 23997606 23997605 23997699 94 ATCATTCTTTTTAGAA------AATTCCAGT--ATAAAGGAGGAACTAAGATTTATCTCACAGAAATTGCCTAAACTTTTTTTTTTTTTTTTTAAGTTGGAG ..:..xx......:..------....:..:.--.....::.::......::x.xx.:.:.::..:x....x...x:.................:........ 16M6D9M2D69M 69/94 73.4% 94/94230402 0.0% 8/94 8.5% 110674723 79539832 +5951 chr4 + 190214555 134702490 134702489 134702704 215 CTTGTCATCTAAACACAACCACAGGCTTTTCTGGATGTCAAGG-CCCAGCTTTAATAACTAGTGCTTATTTAATCGAGACAAATGAAGCTCTCTAAATGATTGGCAGCTTAAAGTCTGACAGATCTGTCGGCTGTTATCTTTCAAATAAGAGTGAAATCGAACAGCTTAACACTGTGCAGA--GGGTGGCTACA--GCAGAGCATTGAGGCCATAAATAT chr4 + 94230402 28629885 28629884 28630100 28629885 28629884 28630100 216 CTTGTAATTGAAAGAAAAACAGAGGCTTCTCAGCATGCTGAGGACTTAATTTTAATAACTGATGTTTACTTAATGGTTGTAACTGAAACT----AAGATATTGGCAGTTTATAATATGCTAGCATTCCCAGCTGTTATCATTCAAATAAGAAGGAAGAGTGAGAAATTAACACTGAAAAAACTACTTAGCCACATGGTATAGCACACAGGGTATAAACAT .....x..:x...x.x..x..x......:..x.x...:::...-.::.::..........::..:...:.....x.xx::..x....:..----..:xx........:...x.:.x..x:..xx:.x:.:.........x...........:x...:xxx:.x.:x.........x:x.:.--:xx.:..:...--.:.x....:xx...x:.....:.. 43M1I46M4D87M2I11M2I24M 140/211 66.4% 216/94230402 0.0% 9/211 4.3% 106072605 84141950 +7584 chr4 + 190214555 134727255 134727254 134727777 523 ATGCCTTGATCTTATTGAATTATATGGATTCAGATGTAGACTTTGAGTAGCAGCGAAGGCTGTGTGGGAAATCTTTCCACTAATAAACAAA-AGACTGAAAGCTCAGTAAACTACGTATTTTTTTTCTCTAAGGTGAGGTTTTAATAGATACTTTTCAGTATATTGACTTTCTGATTATAATGCTTTTAGTTCAAAGTG-----TTAACATGATGGAGTCAAAGGAAGAGGAAGGTAAAAATAAAATCCCAGCAAACCAAAACACCTAAGTTCTATAGATCGAGAGCTTCTATTTAATTTGGTTGTTTTGTTTTTGCTTCTGAAGGATGCAAATCATTCTCCAAATGACAATGTTCTCTTTTGATT-------------GTTTTTTTTGTTTTTGTTTTCTATCAGTACAGTGTATTTTAATCCAGCTGTTCATGTCTTCCAGTGGGACAAACAATAACCTACAATTAAATGCAGGTGCTTTGAGAAAAGAATACCCTCCTTCTTCCTAATGGCTTGAGGTAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 28642992 28642991 28643464 28642992 28642991 28643464 473 ATACATTGATATTATTGAAATATATTCATTTAAATTTCAATCTT----AGTGACATACCATTTGTGGAAAATCTTTCAATTAATAAACAAGTAGGTTGCTCACACAAAAA------TAATATTTTTCTTAAAAGTT-GTTTTAAATAGACTCTTTCTAAAGCATTTA--------TCATAATATTCTTA--TAGGAGTGGTTTATTAACTTGTTTGAG-CAACGTTACATGAAAG--------AAATCAGAGGAGAACCACACA---------------------GCACTTGTTT-------TTCTTATGGTTTCTCTTCAGAGTAGTGTG---CTTTTTGTAGAAGAAAGAGCACATTTCCTGCTCAGGAAAAGAGGAGTATTTTCTGCTCTTGCCT-----CAGTACCGTGTTCTCTCA--CAGCTGTTCCTGCCTCCCTGTGGGG-ACACAATAAGCTGCAATTAAATGCAGGTGCTTGGAAGCAGGAGTGCCCTTGCTCTGTTTAACACTCTGAAGCAGCAAACAAAAGAGACAGGAA ..:.x.....x........x.....xx...:.:..x.x:.::..----..:::.:x.xxx.x.....:.........x.:..........:-..::..xxx:.x..:x..------..x.x.......:x..:..x-.x...x......:x....::.:x::...x.--------.:.....::.:...--.x::....-----.....x..x.x...-...x.xx.x.x...:.--------.....xx..x.:.x.x.x...---------------------..x::.:...-------..x..x..x...:x....x..:x::..::---.x..:.x:.:.x..x.:x.:x.x:..::x::.-------------..x....:..:.:...::.-----......x....x:.:.x.--.........x..:..:..x.....:-.x.......x..:...................x..::x.:..:.:....:x:...x::...::x::...:.:.:x...x....:.:.x.::.. 44M4D43M1I18M6D20M1D30M8D14M2D8M5I14M1D16M8D21M21D10M7D29M3D32M13I19M5D18M2D25M1D93M 298/454 65.6% 473/94230402 0.0% 88/454 19.4% 106084263 84130292 +9286 chr4 + 190214555 134757948 134757947 134758417 470 TGCTTATTTTCTTCAAGTCAAAATGCCTTAAAGGAGCAGTATCT-TGAATGTGACGTGGCAGACTCAAGGGGATGCTCTTC--AACATAAAGCATCAGAAGCCTGAGTAACATTTTCTGATCTTGACTCTACGTGACAAGTCGAAAAGAATTTTTTTCAATTTAGTTTTTACCAAGTCAGATTCTATTTGACAATATGGCAGCACTACACATGGAAAGTAACTTATTACTTTGGGCATCTAGTTTAAATAGAGACAATCCATAATGTGCATGTGAAAAAAAATGGCCA------CTGTTCTTGAAGCATTGCCCTTGAGCAAGCAACAAGTTTAAATCTGTCAGTGTGGAAGAAATTGTTTTTTCTTAATTGCTTAATTGTTAACCCTAGGAGAAAATGACAATAAAA----------------TTCTACTTCAAAATGTTTATGTTTTTGGAATTA---CAGGTATGTATTAAGGAGTTTTTAATAATTCCAAAAAT chr4 + 94230402 28654521 28654520 28654989 28654521 28654520 28654989 469 TGCCCCTCCTCTCATAGTCAAAG-ACTTTCAAGCAACACAGTCTCTGTTGGTAAAATGGAGAGTTCTGGAGTATGTGTGTCCCGATGTGATATATCAAAAGCCCTCATGCTGTTCTCTGATCTTGACTTCACAAGACAGCTGGGACAGCACTTTTTTGCACTTTAGTTTTACCCAGTCAGAAAGTATTTGCCAGTATGGCAGCACAGTACTGGAAAAGGAACTTATTAATTCAGGCA------------------GACTCA-AATATGTATGTG--ATATAATGACCACTCATGCTGTTCCTGAAGTGTTACCCTTGAGCAA-CAA-AAATTAAAATTCATCAATGTGGAAGAAAGTG---TGTCACAATGGA--AATCAGATATCTGAGTGTGGAAGGATAGTGAGACTGGTACGGAGAAGTCTTCTATTTCATTATTTTTCTGCTTTCATAATTCTCTTACATCTTTAATGAGGGCTCATGAATGAATTCAGAAAT ...::x.::...:xx.......:-:.:..x...x.:..xx:...-..xxx..:.x:...x::::..x:.:.x...:x:x..--:.::.:.x::....:.....:xx:.:x::..:.............::..:x....:x.x.:.x..x.:......xx.:..x:x.......x.......xxx......x..:...........x::..xx.:....x.........x..::....------------------:.::..-...:..:.....--.x.x....:...------......:.....::..:...........-...-..:..x....:::...:...........x..---.x..x:...x.x--...::xxx.:.:x..x:x::..x..:.:.:.:.----------------.....:....xx..x...x..:...::x....x---:.x:.x.x..x.:...:x.:x.x...:.x.:..:.... 23M1D20M1I36M2I154M18D6M1D12M2D12M6I28M1D3M1D31M3D12M2D33M16I33M3I38M 287/441 65.1% 469/94230402 0.0% 57/441 12.9% 106103427 84111128 +3038 chr4 + 190214555 134787592 134787591 134787676 85 ATATTTCTTGGAGGTTTTGTTTATTCTTTCCATTTCATTTTTTTTCTTTTTCTTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTTT chr4 + 94230402 87898144 87898143 87898228 87898144 87898143 87898228 85 ATACCTGCTGAGTGTTTTAATTTTCATTTCTGTCTCATGCTGCATTCTTACTATTCTGTTTTTCTTTTCTTTTTCTTTTCTTTTT ...::.x:..::x.....:x..x.:x....::.:....x:.x:x.::..x::x..::x..........:..........:..... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 46889448 NA +3332 chr4 + 190214555 134787611 134787610 134787676 66 TTTATTCTTTCCATTTCATTTTTTTTCTTTTTCTTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTTT chr4 + 94230402 3394737 3394736 3394802 3394737 3394736 3394802 66 TCTATTCTTTCTCTTTCATTGTTTTGATTCTTCTTTACTTTTTTGGTGCTTTTTCCTCTTTCTATT .:.........:x.......x....xx..:......x.......xx.x:.....:..:...:.x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 131392874 58821681 +3416 chr4 + 190214555 134795886 134795885 134795951 66 GTGGTGCGCCCCTCTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......:.x--.x....:...........::........x.xx.x..:x.............:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 58762685 NA +3624 chr4 + 190214555 134799855 134799854 134799954 100 AGCGAGATCCTATTTCAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAA--AGAGAGAGAGAGAAAAAAAATGGAAAAATTTGAGTAAAGGTGGAAAGAT chr4 + 94230402 1046802 1046801 1046899 1046802 1046801 1046899 98 AACGACACCTTAATTCAAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAATCG----TTTTCATTTTAGGTGGGAGGAT .:...x.:.:..x.....x.:x:...x........:......:........--:::..::...:.:........x.----x...x.x.xx......:.:... 51M2I23M4D22M 69/96 71.9% 98/94230402 0.0% 6/96 6.2% 133753053 56461502 +3270 chr4 + 190214555 134799861 134799860 134799925 65 ATCCTATTTCAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAAAA chr4 + 94230402 54892518 54892517 54892582 54892518 54892517 54892582 65 ACCCCATTAATACCACCACCACAAAATAGGAAAGAAAAATAAATAAGAGAGAAAGAGAAAGAAAA .:..:...xxx..x..x..x......x.::...:.....x...x........:.......:.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 79907343 NA +3115 chr4 + 190214555 134799870 134799869 134799916 47 CAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGA chr4 + 94230402 83870627 83870626 83870673 83870627 83870626 83870673 47 CAACAACAACAACAAACTGAACAAAAAAAAAAAAAAGGAGAAAAGGA ................xx:..x..............:....:.::.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 50929243 NA +3086 chr4 + 190214555 134799889 134799888 134799924 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAAA chr4 + 94230402 75300456 75300455 75300491 75300456 75300455 75300491 36 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..............................:.:... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 59499433 NA +3275 chr4 + 190214555 134799893 134799892 134799942 50 AAAAAAAAAAAAAAGAGAGAGAGAGAAAAAAAATGGAAAAATTTGAGTAA chr4 + 94230402 58693970 58693969 58694019 58693970 58693969 58694019 50 AGGAAAAAAAAAGAGAGAGAGAGAGAAAAAAAGTGGGTACATTTGCATAA .::.........:...................:...:x.x.....x:... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 76105923 NA +3354 chr4 + 190214555 134810328 134810327 134810379 52 TGTGTGTGTGTGTGTGTGTATATATATATATATATTTGTTTTTTTTTTTTTC chr4 + 94230402 23522764 23522763 23522815 23522764 23522763 23522815 52 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTC ..x.x..::...........................:x....::.x...... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 111287564 78926991 +8599 chr4 + 190214555 134819646 134819645 134819886 241 ATTTATATTACAATGTTTACATAAGTTCCAAGTTATG-GAAGCTTTTAATATTCAAGGGCCATTTCTATGAACAGCTTTATGAAATGATATTACTTTAGCAATTGACTAGCACTGCAGCATTG-TTTTCAAGGAAGCTGTCCTTGAAAGCCAATGTATT--------TTAAGAAGGTTAATTAAGGTCACATTTATAATAGAGTGGAATGGAATCTAGAATCAAACTAAGTAACTTTATATCAGACTAGGA chr4 + 94230402 28674194 28674193 28674435 28674194 28674193 28674435 242 ATCTATATGA----GTTTATATAAGTCACATAGCATAAGAAGCTATTAATATTCAAGAGTTATTAGTACAAATCCCTTTGTAAAGCAAACTTACTTTAGGTTTTGAGTGACATTGCAACATTGTTTTTCAATGAGACTGTCCTTGAGAGTCAACAAACTCCATTTCACTAAGAGGGTTAATTAAGGTCAAGTTTATAATGGGGTAGGAAGAAGCACAGACT-----GAAGCAGCCATATATCAGATTGAGA ..:.....x.----.....:......:x..x:x:..:-......x............:.::...xx..::..:xx....:.:..:::.xx.........xxx....x.::..:....:.....-.......x..::..........:..:...::x.:.--------:.....:...............x:........:.:..:.:.x.:.::x:...x.-----x...:.:.:x.........:.::.. 10M4D23M1I85M1I35M8I54M5D25M 164/232 70.7% 242/94230402 0.0% 19/232 8.2% 106145452 84069103 +3015 chr4 + 190214555 134827947 134827946 134828019 73 TGCACCTGTAGTACTAGCTACTCAGGAGGCTGAAGCAGGAGAATCTCTTGAACCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......x.:.......::::.......:x.xx.x...x.x.........x.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 58794742 NA +3063 chr4 + 190214555 134844320 134844319 134844383 64 AGTATAATAATAATAAAATTAAAAATAAAATAAAAAATAAAAAATAAAAAACAAACAAAAAAGA chr4 + 94230402 26426447 26426446 26426510 26426447 26426446 26426510 64 AATTTAATAAAAAGCAAATTAAAAAAAAAATCAGAAAGCAACAGAAACAAACAAACAAAAAAAA .:.x......x..xx..........x.....x.:...xx..x.:x..x..............:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 108417873 81796682 +3537 chr4 + 190214555 134847413 134847412 134847493 81 CATGGTGGCACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGTGGAGGTTGT chr4 + 94230402 76033197 76033196 76033275 76033197 76033196 76033275 79 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ..::....::..:.--.:..:.:...........::........x.xx.x...x.x...........:..x.xx:..:... 14M2D65M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 58814216 NA +3018 chr4 + 190214555 134847534 134847533 134847630 97 CAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAATTGTCTGAACAATTTGCAAAGAAAACGTAAGAAAAAATGTCAGCTATAGTAAA chr4 + 94230402 51908717 51908716 51908813 51908717 51908716 51908813 97 CAAGGGTCAAACTGCTTCAGAAAGAGGAAAGAAAAAAAAAAAAGTAATTTTACAAGGTTGCAATAGGAAAAGAAAAAAAAATGATAAGTTTAAGAAA ....:.:x.....x.x..xx...:.::...:..........:.:.x:.:.x.xx.:x......x:::..x:x..:........x:.:x.x..:x... 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 82938817 NA +3024 chr4 + 190214555 134875873 134875872 134875922 50 TTTTGTTTTTGTTTTTTTTTTTTTGGTGTTTTTGGGTGGGGAGGGGAAGG chr4 + 94230402 27947657 27947656 27947706 27947657 27947656 27947706 50 TTTTTTGTTTGTTTGTTTGTTTTTGGTGTGTGTGGGGGGGGAGGGGGGGG ....x.x.......x...x..........x.x....x.........::.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 106928216 83286339 +11192 chr4 + 190214555 134887817 134887816 134888449 633 TATACAGTTTATGTAGAAAATCTTCAGTCAGTTTCCATGGCAGCTTGCAACT--AAATATGTGATAAAATAAATTATTTAAAGTTTAAATTCTCTTTAAATACACTAGAGTTTATACCTCTTGAAGATAGTAAAGAGTCACTTAAGGCTATTTTACATGTATT----AATGTATAGCTTAT-------GAATAAATACCTTTTGTAT-------------------------------ATAT-----TAAAAAACTGGGCATATTTTATAAAATTTAAAAGAAAAAAATACCATATTA------------------TGTATTGAAGATTCCAAACTCCAACCATGGGAGCTGTCAAGAGGGATATATATTTCATTTGTACCCAATATAATTTAAGTTTCACACTCCCCTGCATCTCTGAGATACCAGATTACCTGTGTTTTTTATATCTTATAGCCCACAGCTGACACTTCAGTCACTATGGTAACTATACTGTCTCTTACAGTAATACAAGGCTATATCCATGACCAATAAAATCTTGAACAGGGTTCATAAATAATCCATGTGAAAGTGAATCTTGCTGTCACATTAGTTTCCGGCTAATCTGGTTTTGGCAAGTGTATAATTATGTTGATGAAATTGGTTTAGTGGATTGTTTACTCTGTCTTCCGTAATGATATAACATGTAGTGACAGAAACAAA chr4 + 94230402 28703646 28703645 28704313 28703646 28703645 28704313 668 TGTATTATTTATTTGGAAAATTTGCTGCCAGTTTCCGTGGGTGCTTGGAGATCAAAAAAGGTGA----ATGAATTTTAAATATTTAAAATCCACCACAAATAGCATATATTGCAAACTCCAAACATACAGAGAAGAATCA----------TTTTGCAGGCATTGTGAAATCTAATGCTTAGAGGAAAGGAAGAGGTTCTATCTGTATCTGCAAGGAGGAAGAAAGTAATTCAGTTACCATATGTATGTGGAGAACTTTGCAATGTTTATGGGAATAAGAGAGCAGAGGGAGCCTATTAGCTTAATGTGGGACCTGGTACACTGTA----CCCACCTCTACCCATATGA---------AAAGCTATAT-TTGCAGATGTAACCAATCTTTCTTAAATGCCAAACTTTGCTG-GCTTGCAAATTACAAGATGTTCATCATTTATCATATCTTTAAGACTGCTCTTGTGG--TCTGTCACTATAGCAACTCTGTTGGCTTCTGCAGCAACACCTGGTCCTATCAGTAGCTA-TATACTGTGGAGGTTTCTTCATAAATAATCCATGTGAAAGTGAATGTAACTGTCATGTTAATTTGTGGGTAACCTGGTTCTGGGAAGTTTATAATTATATGTATGAAGCAAATAAAGCAGATTGTTTGCTTTTTCTTCAGCAATGACTTAACACAAACTGACAGAAGCAAA .:..:x:.....x.:......:.x.x.:........:...xx.....x.:x.--...x.x....----..:....x.xx.x.x..x....:.x.:x:.....xxx..x.x.x:.x..::.xx:x.x.:..x:....:...----------....:..x.:...----...x..xx.....x-------...x.::.x.:x.:.....-------------------------------....-----.::.:....xx...xxx.....:::.x.x.:.:::x.:.::x.x.x.....------------------.::.:..x.----..x.x...:.x....:x..---------.::.x.....-..x..xx....x.....x.xx:....:.x:..x...::x...-:::.x::.:x...x....xx:.xx::...x.:.......xx..x.::.xx:..xx:--..x........:.:....x.::..x..::.:...:..:..xx..::x....x:.::.:.-..x.x.x.x..:xxxxx............................x.x:......::...:...x:..x...:......:...x....x.........:.xx.....::x::.xx..::........:..:.x.....x.:.....:x.....::x.x........:.... 52M2I10M4D72M10D13M4I14M7I19M31I4M5I51M18I9M4D19M9D10M1D42M1D56M2D59M1D171M 388/601 64.6% 668/94230402 0.0% 99/601 16.5% 106184171 84030384 +25183 chr4 + 190214555 134921993 134921992 134922857 865 GCAGTAATATTTTGAGGATTGGGAGAACTATCTATCTTA--AAGGATATATTGGATTCATCCATTTGAAATCCCCTAGCACATATTGCAGTAGACTAAAGTAGGCATTTTGAAATTTGAATCAAAATATAAATAGCAGATAGTCAAATTAAATCTCAAGGGTGAGAAGATGGAGGACATTTG-AATCATATTACCAGATGTTCAGCCTCTACTGTGAATTCAAAAACAA-----GAAAAAAAA--------TGTTAACTGGAAATATTTTGAGGTCATCATATATTTTAAAAATACATTTTAGATCTTTATATCATAAGCAAATGCAAGTCTTAAATTAAAA-ATGTATTAAAACCAA----AACACTGAGAGAAAAACTATATAAATAGCTTGAT-TTTCCAGACTTATA-------------AAAGGATCTTACCTCTCATAGAACTGACTCTTCATTCT--CTTT-----GATTTT----ACATGGCAGATTTCTATTATTCAGTATTTCAACTATAGGCACAATAACCAACTC-AAGTATTGAAAATTCAATCATTCCATTTTAGTAAACTTCAGTTCCTATGATCTAATGCATTAATGGTT-AGACAGAGAGAGAGTTCAATATTAAATCCTTTTTTTTTTCATTCAGTTTCAGG-----TGGTTCTATTTCCAAAACTATTGAAGCAAAGGCATTAATTATACATTTCCATTATGACAGAGCCAACATCAGCAGTCACTAAGGCATAATTTCTTTAGGAGGAGATGCAGCCTGTTTTCTGATCAAGTTTCGTTTCCCACAGGGAGGCATCAGTCTTATGTTACATAGCAAGCAGGCAAGAGAAGGGAAGCAAATTAT-AAGCACTTCACAGGGGAAAAAAGAATGAGGATCTGACTCAGGGCATCCTATTGAA chr4 + 94230402 28720242 28720241 28721145 28720242 28720241 28721145 904 GCAGTAGC--TATGAGAGGTAAGAGAACTGTCCATTTTAGAAAGAAGGAGTTGAGACCATCCATTTAATTTCACTTAGGACCTATTATAGCAGAATAATATGATCATTTAGAATTTTAGATCAAAATATAAATAGTCTGAAACTACCCTGCATCCCAGAAGTGAGTAAACG-AGACTATTTGCAGTCATAATACCAGATGTTTAGCCGTTACTATAAATTCAACAACAAAAATTGAAAATAAAAAGTGAGCTGCTAATTAGGGATATTAGGAG-TCATGTCATAGGTGAAAGATGA--TCTAAAATGTTGTTGCAGAGTGCAGCACAATAGTGAAATTAGCACATCTATTATCGCTGCTTGCAACTCTG-TAGGAAACTAATGGAAATAGCTTAATCTTTTCAAGCTCCTCTAAGAGGAGAAATAGAGGATTTCACCTGTTACTGAATTTTCCCTCCTATCTTACTTTTGGTAGATTCTTACTGCAGATCAGTTTTGTTTTGTTGAATGCCTTAGCTGCAGATTCAATAAATAACTCTAAAGATGAGTGATCCAACTGTTCATTTTTAGTAAATAGCAGCTATAGTAATCTGTTGTGATAATGTTTTAAAAAGGAAAAGAGTGAAGTCCTAAA-ATTCCCCCTCTTAAGCCAGTTTCAGAGTTGTTTTTTTTTTTTTCATGGCAGTAAAAGGAAAGGCATTAATTATACATTTTCATTATGACAGAGCCAACATCAGCAGTGACTAAA-CATAATTTGTTTAGGTGGCAGTACAGGCTGTTCTCTGATCAAGTTTTGTTTCCCACCGGAAGGCATCAGTCTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAAGCAAACAATAAAACACTTTGCAGAGGAAATAATA------ATTTGACTCCCATTGTCCTACTAAA ......::--.x....::x.::.......:..:..:...--...:.x:x:...::x:.........:.xx..x.:...x..x....::..:...x...x:.::x.....x...x...::................:xx:x.:::.xx:.:x...:..:::.....x.:.:.-..:x:.....-.:.....x...........:....x:....:.:.......x.....-----.....x...--------..:...:.:.::.....xx...-....xx:...xx.x...:..:x--.:..:.x:x..:.xx..x.:xxx.:::...xxx.x......:x.-..x.....xx:.::x----...x...-x..:...x:x..:x.........:..-...:..::..:x.x-------------.:.....:.:....x.:.:x...:.xx.:..:.xx...--....-----....:.----:..x:x...x...x.x..:..x.:.:::.:.:..::..::x......x:.....-..:x..x::x:..:...:::...xx..........:xx...:.x:x:.:....:x..::x.....x..-.:.x..::.:.....xx.:.x:....-x:.:::::.:..x.x:.........:-----.xx..:.x...:..x::.x:.x:...x.....................:...........................x.....:-........x......x..x::.:...x.....:.............:.........x..:..............x:.....:..................:.........:x..-..:.....::...:.....x..x.------..:......xx:x::.....:.:.. 8M2D29M2I130M1D10M1I46M5I9M8I22M1D22M2D44M1I15M4I7M1D26M1I14M13I38M2I4M5I6M4I54M1I68M1I26M1D26M5I83M1D114M1I24M6D25M 583/850 68.6% 904/94230402 0.0% 69/850 8.1% 106201751 84012804 +10166 chr4 + 190214555 134922678 134922677 134922890 213 AGTCACTAAGGCAT----AATTTCTTTAGGAGGAGATGCAGCCTGTTTTCTGATCAAGTTTCGTTTCCCACAGGGAGGCATCAGTCTTATGTTACATAGCAAGCAGGCAAGAGAAGGGAAGCAAATTAT-AAGCACTTCACAGGGGAAAAAAGAATGAGGATCTGACTCAGGGCATCCTATTGAAAAAATAAAATTGTCTACTTCTGTTAGTTATTTT chr4 + 94230402 27570223 27570222 27570440 27570223 27570222 27570440 218 AGTGAGTAAAACATTAGTAATTTGTTTAGGTGGTGATGCAGGCTGTTCTCCGATCAAATTTTGTTTCCCAAAGGAAGATATCAGTTTTAAATTACACAGCAAGCAGGCAAGAGAAAGGAAGCCAACAATCAAAACCTTCCCAGGGGGGGTAAGAATAAGGCTAGAGCTCCAGAGATCCTATTTAATAAATAAACACCTTCATTTCTGTAAGTTAATTT ...x.x...::...----.....x......x..x.......x.....:..:......:...:........x...:..::......:...x:.....:..................:......x..:x..-..:xx....x......:::x......:...x.xx::...x:.:x........x..x.......xx:x.::.:......x.....x... 14M4I111M1I88M 160/213 75.1% 218/94230402 0.0% 5/213 2.3% 107352455 82862100 +3605 chr4 + 190214555 134944603 134944602 134944689 87 ACACAATAAACTTCCTATGTTCTGCAA-----------AATAAAAAGAGAAAGAAAAGAAAAAGAAAAAGAAAAAAGAAAAAAAGAAAATCAACTCTA chr4 + 94230402 38128953 38128952 38129047 38128953 38128952 38129047 95 ACACAATAAGATC---ATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCAAAATATACCCTA .........:x.:---.....:.....-----------........x..........:.x..............x.:::..x::x.....xx..:... 13M3D11M11I60M 66/84 78.6% 95/94230402 0.0% 14/84 16.7% 96815650 93398905 +13072 chr4 + 190214555 134958867 134958866 134959261 395 TTATACCATTTTTTTTCTTTTTTTTCCAGAGTAAGGGCAGAAAATAAAAGGCCTGCTAATAGTTAAAATATAATCTTTCTTTATGTTAGGGGGAGAAACAAGCCTGTGAACCTAAAATGGCAGCTAAGAAAGGATAGTATTTATAGAAGCTAGAATATGAAAGGAAATGCCAGGAGATGTCAAAATTGATTGAAACGCTCAAGCCTGACAGCTCTGAAATTTGCAGGTTGAATACCTGCCACAATTTGTGAATGATCCTCTATATTCTTAAACTGCTTGGTTTAGCTAGCATTGT-ATAGAAATGGATGAGAGAAGCCAAGAAACTATAAGCTATATCCTAGTGCCATTTCATTCCTAAAACTTGCCCTAATACATGTTACTCTGCAATTTAAAAC chr4 + 94230402 28733349 28733348 28733725 28733349 28733348 28733725 377 TTATAATTCTTGTTTATATATATTTTGAAAGTGAAGACA---AGGGAAAGATACAGTAAAAGGTGAGAAGCATTCTTGCTATATG-----GTGAGAAA--------TGAACCAGAAATAACACCCAAGAAGGGA-GTTATTTATAGAAAGTAGAATCTGAAGAGAAATGCCAAGAGATGTCAAAACTGATTGAAACATGCAGCCTTGACAGTTTTGAAACTCACAGGCTGACTGCCTGCTAGAATTTGTGCATGATGCTTTATATTCTTCAGCCACTAGGTTTGGCTAGCACTATGGTGTAAGTGGGTGAAGGAAAACAAGAAACTATGAAATATAG--TAGCTCCTCTTCTCTCCCCCAGTCTTGAATGATGTATAATACTTACCACTCTAATAC .....x:x:..x...x:x.x.x...:x.:...:.:.:..---.:x:....::x::x...x..x.:.:.x::.x....x..x....-----.x......--------......x:....::..x.:.....:...-:x...........:x......x....::.........:............:..........::x..:x.:......:.:.....:.::....:...x.:.....:.x........x.....x..:.........x.:.::..x.....:.......:.:.-:.:x..:...:...::...:x...........:.:x....x--...:x..x:...x:...:xx.:::.xxxx.:..::..:x....:xx..x.:...x.. 39M3D43M5D8M8D28M1D160M1I41M2D57M 257/376 68.4% 377/94230402 0.0% 20/376 5.3% 106225518 83989037 +3104 chr4 + 190214555 134981833 134981832 134981895 63 ATTAAAAAAAGAAAAGAAAAGAAAAGAAAATATGTATATATATATATATATATATCTCACTTT chr4 + 94230402 90030072 90030071 90030134 90030072 90030071 90030134 63 ACTGAAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTT .:.:...x..:....xxx:.:.::.:.......:....:.:.:..............x.:... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 44951761 NA +3175 chr4 + 190214555 134991065 134991064 134991141 77 GCTTCCAAGTGCTATATGATCCCTGGAGACCAAAAGAGAAAAAAAAAAAACAAAAGCAAAAATAAACAAACAAAAAA chr4 + 94230402 68134232 68134231 68134304 68134232 68134231 68134304 73 GCTGCTAAAAACGACAGTCTCCCTGTAGG----AAAAGGAAAAAAAACAACAACAACAAAAACAAACAAACAAGAAA ...x.:..:x:.x.:.xxx......x..:----..:..:........x.....x.:......:..........:... 29M4D44M 54/73 74.0% 73/94230402 0.0% 4/73 5.5% 66856833 NA +3570 chr4 + 190214555 134991094 134991093 134991182 89 CCAAAAGAGAAAAAAAAAAAACAAAAGCAAAAATAAACAAACAAAAAAAACACTGAAAAACTGCAA--AACATAGTTACAAGAAGCAGATA chr4 + 94230402 17918431 17918430 17918520 17918431 17918430 17918520 90 CCAGAAGGAAAAAAAAAACAACAAAAACAAAAATGCACCACTTAGAAAAACATCCAAAATCTGAAGCTAAC-TGTTTGCTAGAAGCAAATA ...:...::.........x.......:.......:x..x.x:x.:.......::x....x...x.:--...-.:x..:.x.......:... 66M2I3M1D19M 65/88 73.9% 90/94230402 0.0% 3/88 3.4% 117072663 73141892 +3109 chr4 + 190214555 134991098 134991097 134991154 57 AAGAGAAAAAAAAAAAACAAAAGCAAAAATAAACAAACAAAAAAAACACTGAAAAAC chr4 + 94230402 9875521 9875520 9875577 9875521 9875520 9875577 57 AAGAGATTAAGTGGGGAAAAAAACAAAAACAAACAAACAAAAAAAACCCCAAAAAAC ......xx..:x::::.x....:......:.................x.::...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 125115577 65098978 +3089 chr4 + 190214555 134991104 134991103 134991157 54 AAAAAAAAAAACAAAAGCAAAAATAAACAAACAAAAAAAACACTGAAAAACTGC chr4 + 94230402 37643087 37643086 37643140 37643087 37643086 37643140 54 AGAAAAGCAAAACAAAGTAAAAACAAACAAACAAAAAACAAACTGAAAAGTTAC .:....:x...xx....:.....:..............x.x........::.:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 97348017 92866538 +3096 chr4 + 190214555 135006540 135006539 135006609 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 58973343 NA +4505 chr4 + 190214555 135007699 135007698 135007919 221 TCTACTCTCTCTCTCTATATATATACACATACATATACATATATATACACATATATATACACACATA----------------TATTTTATATATATTATATATTATATATAATATATTTT---ATATATCATATATTTTATATATT------------ATATATATTATATATATATATTATATATATTATATATTATATATATTATATATATTATATAT---ATTATATATTATATATATTATATATATATTA chr4 + 94230402 26320092 26320091 26320344 26320092 26320091 26320344 253 TTTATTGTATCTATCTGCACATAGGCACAGACCTATAAAAGCAGGGA-ACTTGTGTCCACAATCATCACTGAGTCTGAGGCATTGTTCTGTA-ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:..:.x.x...x...::.:...x:....x..x....x.x::.x:x.-..x.:.:.x:...xx...x----------------.:..:.:..-..:.x:.:.:.:..xx....x.......---....:.xx.xx.x.x.xx.....------------..x...x.:.:..:......:..:....xx......:......:.x.....x......:...---..x:......x.xx:....:.....:..x.. 47M1D19M16I9M1D28M3I23M12I62M3I31M 148/219 67.6% 253/94230402 0.0% 36/219 16.4% 108687607 81526948 +3816 chr4 + 190214555 135007791 135007790 135007955 165 TATAATATATT---TTATATATCATATATTTTATATATTATATATATT-ATATATATATATTATATATATTATATATTATATATATTATATATATTATATATATTATATATTATATATATTATATATATATTATATAT---ATTATATATTATATATATTATATATATATTA chr4 + 94230402 26320179 26320178 26320344 26320179 26320178 26320344 166 TGTAATGTAGTGTGTCATTAATAAAATATTTTCT----TATATGTATTCAAATGTTGATATTTAATCAGCT-TAAATT-TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:....:..x.---.:..xx..x.x.......x.----.....:....-.x..:.xx.....xx..xx::.-..x...-...x.xx:..:.....xx..:...........xx......:x......x......:...---..x:......x.xx:....:.....:..x.. 11M3I20M4D10M1I22M1D6M1D59M3I31M 115/159 72.3% 166/94230402 0.0% 13/159 8.2% 108687612 81526943 +3142 chr4 + 190214555 135007829 135007828 135007921 93 ATATATTATATATATATATTATATATATTATATATTATATATATTATATATATTATATATATTATATATTATATATATTATA---TATATATTATA chr4 + 94230402 26320249 26320248 26320344 26320249 26320248 26320344 96 ATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..x...:x:.:..:.....xx..:...........xx......:x......x.xx...:...:xx...x.....x.x.x:..---.....:.x... 82M3I11M 66/93 71.0% 96/94230402 0.0% 3/93 3.2% 108687580 81526975 +3894 chr4 + 190214555 135007848 135007847 135007930 83 TATATATATTATATATTATATATATTATATATATTATATATATTATATATTATATATATTATATATA-TATTATATATATTATA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:......:..:............:......:.x.....x......:...:xx...xxx...x.x..-....:.....:.x... 67M1I16M 64/83 77.1% 84/94230402 0.0% 1/83 1.2% 108687587 81526968 +3208 chr4 + 190214555 135007872 135007871 135007974 103 TTATATATATTATATATATTATATATTATATATATTATATATATATTATATATATTATATATTATATATATTATATATATATTATATATTATATATATTTTAT chr4 + 94230402 36606083 36606082 36606182 36606083 36606082 36606182 100 TTGCATGTCTAATGTATATTTTATATCAAATAATTTACATGTATATAATATATAGAGTGTATTATATTAAAAATGTG---AACATATATTAACTCTTTCTTAT ..::..:.x.x..:......x.....:.x...xx...:..:.....x.......xx:.:........xx.xx..:.:---.x:........xx.x.x.:.... 77M3D23M 69/100 69.0% 100/94230402 0.0% 3/100 3.0% 98401789 91812766 +3858 chr4 + 190214555 135007899 135007898 135008012 114 ATATATATTATATATATATTATATATATTATATATTATATATATTATATATATATTATATATTATATATATTTTATATAATATATAATATATTTTATATATTTTATATATAATA chr4 + 94230402 26320249 26320248 26320344 26320249 26320248 26320344 96 ATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATC-TA-----------------ATAGTATATTTTTAGTATTGTATATGTAATA ..x...x.:.:..:.....xx..:...........xx......:x......x......:...:-..-----------------...:........xx:....x.....:..... 63M1D2M17D31M 75/96 78.1% 96/94230402 0.0% 18/96 18.8% 108687650 81526905 +6306 chr4 + 190214555 135010410 135010409 135010625 216 TAAGTATAAAATATTAACATAGAAGAAGTTGATTGTTAAAGTGTAACATGTAAAAACTTCATTTTTTCCAATAAATG-AAGGTGGCTAATTAACATTCTACCAAGCTGGTTTCACTGTTCTTCATTAGCTGGCTTTCAATTATCCATGTCAAATATATCTTTTCGCTAAAGGTCTCTGTCAGCAGAGGAACCCACTTAAAATAATTTGTATTCTGTT chr4 + 94230402 28773409 28773408 28773613 28773409 28773408 28773613 205 TAAGAATGAAAAGTTGACATTCCTACAGTTACTTT----------ACATATAAAAGA--CATATCTTTCATTAAAAGCAAAACACTTACTTAAAGTTCCTCAAAGGTGGGTCTAGTATTCTTCATTAGCTAAGATTCTATTGCCCTTGTCAAACTCATCTTCCCTGCAAAGGTCTCTGTCAACTATGAAATCCACTTAACGTAATTAGAATTCTGTT ....x..:...x:..:....xxxx:x....:x..x----------....:.....:x--...x.:..:..x....x.-..::::x:..x....x:...:x.x...x...x.::.x.:.............::xx...x...::..x.......:x:.....::.xx:..............:.x:x.:..:........x:.....x.x........ 35M10D12M2D18M1I139M 138/204 67.6% 205/94230402 0.0% 13/204 6.4% 106237001 83977554 +3347 chr4 + 190214555 135028500 135028499 135028573 74 GTGCACCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGGGAATTGCTTGAACCAGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........x.::........x.xx.x...x::........x:.:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 58995296 NA +3118 chr4 + 190214555 135036307 135036306 135036422 116 ACACTTCAGATACTTCCCTTTATATGTACATATATATTTTATATATATATACACACACACACACATATATATGTATATATGTGTATATATATGCATTTGACACTCCTGATTTACCG chr4 + 94230402 74593178 74593177 74593293 74593178 74593177 74593293 116 ATACCTAGGGTGTTTTCTTTTGCTCACAAAAGTGTTTGGGGTATGCATATGCATAAACATGCATAGATAGATATGTATATATCAATTTATATGCATTTATCCATCTTAACTTTCTG .:..:.x:.:.::..:.:...::x:::.x.x:.:.x.xxx:...::....:..:.x...::..:.x...x..:.:.....:.xx..x...........:x.xx..:.:.:..x.:. 116M 67/116 57.8% 116/94230402 0.0% 0/116 0.0% 60443129 NA +3225 chr4 + 190214555 135036334 135036333 135036424 91 ACATATATATTTTATATATATATACACACACACACACATATATATGTATATATGTGTATATATATGCAT--------------TTGACACTCCTGATTTACCGCT chr4 + 94230402 22600198 22600197 22600297 22600198 22600197 22600297 100 ACACACATATTC-----ACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAATCCTGATCTGCTTCT ...:.:.....:-----.:..::.x.....::..:...x.x..........x.....:.:.........--------------x...x.x.......:.:.:x.. 12M5D52M14I22M 64/86 74.4% 100/94230402 0.0% 19/86 22.1% 112436136 77778419 +8175 chr4 + 190214555 135047166 135047165 135047389 224 AAACCAAGATGATAAAAGCAGTTAGTTTGTGCTACTA------CAGAATGGAATCCACAATTCACATCCTGAGGGAGTGACAAACCAATCATTTAATGCTGTGTCAACACATGTATCTTGTCTTTCATTAGTAAACTCTCCAGCTGGTTTGTACACTGTCAGAAGTGGACCACCTACTGAAATTCATAGAGGTGTGGAAACTGGCATGGTTTAATAATTCTGTTTTGTTT chr4 + 94230402 28807466 28807465 28807687 28807466 28807465 28807687 222 AATCCAAGAAGGCAAAGGGAATTAGTTCATTATTCTTTCTTCTCAG-------CTCACAGTTTGCAATCTGGAAGAGTGAAAAGTCAGTCATTGAATATTGTGTCAACACATGTATCTCATATTTCATTACAACACTATCCTGCT-GTTTTTACATTCTCAGAAGTGGACCTGCTAGGGAAACTTATCGTTATATGAAAATTAGACTGATTTAATAATAGTGGTTTGATT ..x......x.::...:.x.:......::.xx.x..x------...-------::....:..::..x:...:::......x..::..:.....x...::...................::.x........xx.x...x...x...-....x....:.x.............xx...xx....:.:..x.xx:.:..:...:.:.xx..:.........xx..x....x.. 37M6I3M7D92M1D84M 154/216 71.3% 222/94230402 0.0% 14/216 6.5% 106239700 83974855 +26226 chr4 + 190214555 135049654 135049653 135050693 1040 AATATTTAATATATGTGAAAATTTCACTTCTAAA-CCACCAGTAGCCTATCACTATCATTGTGAAATTAACATTGATTCTCTAA----AAAATGTATTTAAATAATTTTAC-AATCACAGCCTTTCTTCTCATGTTAGTTTTACAGCATATGCAAATATTCTGTTTGAAGTGTTTTTATTTGTTCATTTGTTAGGTTTGTTTTTCTAACTGTTTTACCACAGGAAGTTTGTGGCTTGGCTTTTTCCTTTTGCTTGCAATTTTTAAAATTGATTTTAGATTTTCCATGAGAAAAGTATTGCAGACAATTTCAATGATAAAAATGTTAAG---ATTATATTTTCTCAAC-AAGAACTCAGCCAACCCTGTATGTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACTGAAGACATCTTCTAAAAAACTGGGAGTATCAGATACCATAAAAAATTTCTGATCTGAAGGTGTGTCAAAATGTAGCCAGGAACAA----------------TATTTCTTAAGAGAAGCACCACTCGATTGTTTCACTTAATATATCTGGTTTGGGTTGAATAGAAGATGTCTATACCAGAGCATTAACAAACATTGTAATTTGCTGGGGTCAGCCAGGGCTGAGGCTCTGAGATTGAAAGTCATGTTAAATTATGCTATCAGCTTTCAAAACCTCATTAGACTTAACCCATTTAGGCGCCACTGACTTCTCGGAATCACCAATAGAACCCTAATCAGAAAACCACAGAGCAGCCAGTCTTCTGCTATCAAAAACCTCAGTACAA-TTTGTGTATTAATATTTCAAAAAGTTTGTAGAAACACGTACTCTCTGCTGAGCACTACAACCAGTTCAGATACAGTTACA-------------GTCAGTCATCCTGGCTAGAGCTGCTGACTGCTCTC-CGTCTGTGTCTGGACTTGGCAACTGGAGAGAGAAAAAGACAGCAGAAAATGAAACGAATGCGTTCATTTGATTTGTGATTAATAAATTCCCATAATTGGAGAGTCAGACAACCAGTAAACAGAAGAC-TATAAGTTACAGGAA chr4 + 94230402 28809389 28809388 28810331 28809389 28809388 28810331 943 AATATTTAAGA-----AAAAGATTCATTTATAAAGCCATGAGTTGGCCACCATT-TCATTT---AATTAACATTGATTCTGAAAGCACAATATAAATTTTAGTGCTTTTTTTAATCAC--TCTTTCTTTATATTCCAGTT-----------GCACTCATTCT-----AAAAGCTTATATGATTATAATCACCATGCT-------CAAAGTG----AACAAA-------------------TTTTTCCCATGCCTTCCATTCCTTAAATTGTTTTTAGATTTCCCAAGGGGCACACATTGTGTAAGATTATGATGATAAAGTTTTTAAGGCAATTATCTTTCTTTAGTTGAAAGCTGAA------------------------------------------------GTTAATGTTTTTGAAGGCTG----CATTCCCAAGAACCCTGATAAAAACAGAAGCCATGATG---CCCTCTTTTACATCTAAGTCAACCAACTGTCAGAAACAAAGCATAAAGGCAGCCCTGTCTTT---GTGAACCTCAAGTCAATT-TTTCACTTAATATATCTGGTTTTGGCCAACTATAAGATGTCTATAACAAAACACTAACAAACACTGTAATTTGCTGGGGTCAGCCAGGTCTGCAGCTTTGTGACTCTGAAC--TCTTAAAGTATGCTATCAGTTTTCAAAACCTTATTAGGTTTAACCCATTTTGGCGTCAGTGGCTTCTCGGAATCACCAATACACCTCTAATCAGAAAACCACAAAGAAACCAATCTGCTGCTATCAGAAACCTCAGAACAATTTTGTGTATTAATATTTCAGAAAGCATGTTGGAACACATGCTCCCTGCTGAGCATTACAACCAGGCAAGCTACAGGAACAGCAGAGACTGATCGTCAGTAAACCTGGCCAGAAAAACTTGCTGCTGTCTTGTCTGGCTGTGGGTTTGGTAACCAGAGAAGGA------------AAAATGAAATG-----GGTTATTTGGCTCATGATTAATAAATTCCCATTACTGTCAAGTGAGATGA----TACACATAAGCTGCATCTCTTACAGGAA .........x.-----:...:x....:..x....-...:x...x.x.:.:..:.-.....x---................xx..----..x..:x....x.:.:x....x:-......--:.......:x:..x::....-----------...xx:.....-----..:x.:..x...xxx.x:.x.::::.x.:.-------.x..x..----.x..x.-------------------....:.::x...:.x.x...::.x......x..........:...x.:.:x.x::....::x.x:...x::........:x.x.....---.....x...::.:.::-:.:.:..x.:------------------------------------------------..xx:...x.x..x.x:...----...:::.x.:..xx...:x.:x.x....x:....:.x:---::..xx.:.:x.xx.:x.....xxx::x.:...:.....----------------.:.:.:.---.x...x.x.x.x..:...-......................x..:::.x..x............x..:.:..:.........:........................x...x:...:..x..:.xx:.::--.x.....x...........:...........:.....::...........x....:..x..:...................x.x.:.................:..x.:...:...x.........:.........x....-...................:....:x...x.:.....:.:...:..........:.........x:x..x.....xx...-------------......x.x......:...:xx:..x:.....x..-:.....xx.x...::....:...::....::..------------.........:.-----.x.:.....::.::..................x.:..xx:...x...::.----..x...x...x:-:..xxx......... 11M5D18M1I19M1D6M3D20M4I23M1I6M2D20M11D11M5D30M7D7M4D6M19D88M3I16M1I10M48D20M4D38M3D39M16I7M3D18M1D111M2D141M1I80M13I35M1I33M12D11M5D50M4D12M1I15M 651/901 72.3% 943/94230402 0.0% 181/901 20.1% 106240265 83974290 +4161 chr4 + 190214555 135055323 135055322 135055420 98 TCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTTCTCTCTCTCTCTCCCCTCC---CCTCCCCTCTCCTTCATTCCTTCCTTCCTTTCGTTCTTCCTTTCTT chr4 + 94230402 14684122 14684121 14684222 14684122 14684121 14684222 101 TCTTTTTCTGATTCCTCCCTTCTTCCTCCGTTTCTCACTTGCTCTCCCCAACAAGCCCCCCCTCTCCATCTCTGTATCCTTCCTTACGCTGTCCCTCCCCT .....:.:.xx.....:.:.....:..:.x......x..:x........xx.---..:.........x..x:.x:x.........x..:.x.:...::.:. 52M3I46M 70/98 71.4% 101/94230402 0.0% 3/98 3.1% 120371201 69843354 +3116 chr4 + 190214555 135055342 135055341 135055396 55 TTCTTTCTTCTTTTCTCTCTCTCTCTCCCCTCCCCTCCCCTCTCCTTCATTCCTT chr4 + 94230402 4662709 4662708 4662763 4662709 4662708 4662763 55 TTCTCTCTTTTTCTCTCTCTTCCCCCCCCCTTCCCTGCACACTCCTTTATTTATT ....:....:..:.......::.:.:.....:....x.x.x......:...:x.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 130392633 59821922 +4135 chr4 + 190214555 135055352 135055351 135055494 143 TTTTCTCTCTCTCT-CTCCCCTCCCCTCCCCTCTCC-TTCATTCCTTCCTTCCTTTCGTTCTTCCTTTCTTCTTTTTCTTTCTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x....x..-...:...::.:...::.x...-::..:.::.x.x..x:.:.:x:.x...:..x:x.::x...:.x...............:----.::x.:.:.::x:......x::.:...::.......:..:.:.x..... 14M1I21M1I59M4I49M 91/143 63.6% 149/94230402 0.0% 6/143 4.2% 84879086 NA +3165 chr4 + 190214555 135055399 135055398 135055479 81 TTCCTTTCGTTCTTCCTTTCTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:....:x..x.:...x..:..:..:..::.:.xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 77683370 NA +3711 chr4 + 190214555 135055414 135055413 135055523 110 CTTTCTTCTTTTTCTTTC-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT----TCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x...:.:.:.....-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:.:----.......:..::..:..:.:.:...::..:.:. 18M5I59M4I33M 73/110 66.4% 119/94230402 0.0% 9/110 8.2% 71358297 NA +3109 chr4 + 190214555 135055419 135055418 135055539 121 TTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTT chr4 + 94230402 63697119 63697118 63697239 63697119 63697118 63697239 121 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x..::...:::...:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:..xxx:::..x....:.:x.xx::.....:..:.::::.:...::.:...::.:.x:.. 121M 67/121 55.4% 121/94230402 0.0% 0/121 0.0% 71358300 NA +3763 chr4 + 190214555 135055421 135055420 135055543 123 CTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTTCATT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC-CCCTCTTTTCTTTCTTCCTTTTTATT ....x.:::...:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx:::..x....:.:x:xx..........-.:....:::..::.:..:::..:... 96M1D26M 75/122 61.5% 122/94230402 0.0% 1/122 0.8% 71358304 NA +3092 chr4 + 190214555 135055427 135055426 135055547 121 CTTTCTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTTCATTCCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x...:.:--.....:xx:x..:.:.....:....:.:x..::.:.x....xx.:.:.x....xxx:::..x...:..:x.xx...:......:.::.::.:.::...:.:.:x..x:.. 11M2I110M 71/121 58.7% 123/94230402 0.0% 2/121 1.7% 71358310 NA +3548 chr4 + 190214555 135055470 135055469 135055571 102 CTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCC--------TCCCCTCTCCTTCATTCCTTCCTTCCTTTCATTCTTCCTTTCTT chr4 + 94230402 14684113 14684112 14684222 14684113 14684112 14684222 110 CCTCTCTACTCTTTTTCTGATTCCTCCCTTCTTCCTCCGTTTCTCACTTGCTCTCCCCAACAAGCCCCCCCTCTCCATCTCTGTATCCTTCCTTACGCTGTCCCTCCCCT .:.:::.x..:...:.:.xx...:.:.:......:.::x......x..:x........--------:.........x..x:.x:x.........x.::.x.:...::.:. 58M8I44M 67/102 65.7% 110/94230402 0.0% 8/102 7.8% 120371357 69843198 +3188 chr4 + 190214555 135055479 135055478 135055559 81 TTTTTCTTTCTTTCT---------TTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTTCATTCCTTCCTTCCTTTCAT chr4 + 94230402 14674421 14674420 14674509 14674421 14674420 14674509 89 TCTTTCTTACATTCTAAAGCACTTTTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCC-CCCCATTCCCTCAATTTTTCTTGTATTTTGT .:......x.x....---------..:...:.........:....:.....:..x...-....x:...:...x.::...:.x:x...::. 15M9I34M1D31M 59/80 73.8% 89/94230402 0.0% 10/80 12.5% 120381058 69833497 +4268 chr4 + 190214555 135055510 135055509 135055659 150 TTCTCTCTCTCTCTCCCCTCCCCTCTCCTTCATTCCTTCCTTCCTTTCATTCTTCCTT-TCTTCTTTTTCTT--TTTCTTTCTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTTTTTTCTCTCTTTCTCTCATC chr4 + 94230402 50176266 50176265 50176422 50176266 50176265 50176422 157 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATC ..:...x....x..x.:....::...:.:.:xx...x:..x:::..x....x...:..-.x......x.x..--...:.x...............:----.::x.:.:.::x:......x::.:...::....x..:.::..:x.::...x.x:... 58M1I13M2I22M4I57M 97/150 64.7% 157/94230402 0.0% 7/150 4.7% 84879244 NA +3221 chr4 + 190214555 135055546 135055545 135055658 113 TTCCTTCCTTTCATTCTTCCTTTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-----ATTTTTTTCTCTCTTTCTCTCAT chr4 + 94230402 65620261 65620260 65620377 65620261 65620260 65620377 117 TTCGTTCCCTTCATTTGTTTTTTCTTCCATTTGTCTTTCTTATCTTATGCTAGTCCTCTTTCTTG-TTTAGTCCCCACTTTACTTCTTTCCAAATACTTCTTCCCTGCTTACTCCCGT ...x....:......:x.::.......:x...x.:......x::.:x.x..xx:::........x-...xx.:.::x....x:.......-----.:..:..:.::x...x...:.:. 65M1D24M5I23M 73/112 65.2% 117/94230402 0.0% 6/112 5.4% 69435285 NA +8734 chr4 + 190214555 135091143 135091142 135091531 389 CCTTTTCTCCACTTA---GTCTTATTCTT-CAGTAACATAGAAAACAAGTTGCTAGCAGGGTGCATTTGTACTTTGAGAATGTCTAAGTCTTTACTGCCCTTCTATTATTTACATTTCCTGGGATGCCGATGTATACCAATAAAGGGCATGAGAATATGACTTCTGCAGAGACATTTATGTTTTCAGCATTGCCTGTGTGTTAAAAACTCATGGCACTTAAAAAAAAAAAGAAAGT-------------------TGCTCTTTTATAGTATCAGTTCAAAAAAGAAATAATCACTTGGGAAATTTTACTCTGTATCTGCTGCAAAGAAACCCAGCAGAGAAGAAAGGCTTACAAAACCATAGAAGGCAGTAAATGTCAGAAAAGGTGGGTCATTCTTGCTTGTAACCATAAG chr4 + 94230402 28830197 28830196 28830564 28830197 28830196 28830564 368 CCTTTTCTCCAGTTATCAATGCTATCCTTGCAATAATAAAAAA-----------------GTG---TTTCACCCCAGTGATGTAGAAAGCTTTAATGTGCTTCTTTGCTTTTACTATCCCATGGAGCTAACAGATATCAGAGAGGGGCAAGAGATGACAGCTTTTGCA------CGCATGTTTTCAGCATTGCCTGTGT------------------TCAAAAGAAAAATCACGGTGGGATTCTTTTTTATGTGATAATCTTTTGTTGCATCGATTGAAAAAGGAAGTAATCACTTGGGAATAGCTGCTTTATTCAAGTTCAAAAGACTCCCAAAAGAGAAGAAAGTCACACTTCTCTGTATAATACAACGAATGCCAGAAAAGGTGGGTCATTCTCACTGTGAGCCACAAG ...........x...---:.x:...:...-..:...:.x.:..-----------------...---..x:..:::::x:....xx..:x.....x..:x.....x.xx...xxx.x...::x.:x..::.::x...:..:x:.:.....x....xx.:::...:....------:x:......................------------------.:....:.....xx.x:..-------------------.:x......:.x.:...::..x.....:...:..............xxx:.:..:.:.x:xx.:.xx.....xx....:x...........x.x:..xxxx.::..x..x:..:::....:....................::..xxx.:...:... 15M3I11M1I13M17D3M3D102M6D25M18D19M19I157M 231/345 67.0% 368/94230402 0.0% 67/345 19.4% 106260946 83953609 +6293 chr4 + 190214555 135097065 135097064 135097337 273 TGGCTACTGATTCCAGATATCCGTGTCAAGGTGGAGCAAAGTGTACATCTGCTTTATCACTCAAATGGCTCA-TTTTATAAGTGAATTTATTATTTGATTTATTTTCTATTAAAACACACATACAAACATACGTATGCAAAGATTCATAAACAGATTATTTTGTGCTTTTGGTGATT-ATTTTATCATTTTAATAGGCAATAAGACATATTAGCAAGTAACA-GAACTATTTATGAAAACAACCTAGCACAACATTCATATTATCGAAAGATACTA chr4 + 94230402 28833576 28833575 28833825 28833576 28833575 28833825 250 TGACTGTTCATTTCAGAAATTTGTCCTGATACAGGGCAGAGAGCACATCTGTTTAATCACCCAAATGGCCCATTTTTATAAATGCA--------------TGCTTTCTTTTATAACTATCATGTACATATAC--------AAATACAGCCACAAACTCCACTGTAGTTTCAGTGATTGATTTCATTATTTTAATGGGTGATAATCCACATTATGGAATAACATGGAATTTTTAGGATAA-AGCTTTTAAAAACA---ACTTTATTAGAATATACTA ..:..::.x...:....x..::..x:::.x:::.:...:..x.:.......:..x.....:........:..-........:..x.--------------.::.....x...x...xxx...::.x.:....--------.:..x..xxx...:.:.x:x:...:x...::......-....:..:........:..::....xx..:....xx:.:.....-.:.x.x....x..x..-.:.:.xxx.x....---.:x....:::..x...... 72M1I13M14D32M8D37M1I44M1I16M1D14M3D19M 166/247 67.2% 250/94230402 0.0% 29/247 11.7% 106263489 83951066 +3355 chr4 + 190214555 135119140 135119139 135119301 162 TGTTAAATTATTAACATTAACAACTATTTTTTATTATTTTTAAAGTTATTATTTTAGAACCAATTATTATGTTCTGGTATTGTGAAAATTTCTTTTGTATTCTTAATCTCATTTAAATCTCACCTTTGTAGAAGAACTAATACTATTTTCACTTTACACATG chr4 + 94230402 36944033 36944032 36944183 36944033 36944032 36944183 151 TGTCATATTCTTCATCTTATCATTTTTCTTCAATTATTTGTAAAATTACTATTTTTATGCCTGTTACTATTCTCTAATATGCTGTATCTCCTTTTTCTGTTGTT--TTTTTTTTAAACTTGAACTT---------ATTCTTATCTTTTCTAGTTTATACTTG ...:.x...x..x.:x...x..x:.x.:..:x.......x....:...:......x:x:..x:...:...x:...::...xx..x.xx.:::....x.:..x..--.:.:x......::.x.x...---------.:.xx..::x...::.x....:..x.. 104M2D20M9D27M 95/151 62.9% 151/94230402 0.0% 11/151 7.3% 98175107 92039448 +3268 chr4 + 190214555 135121440 135121439 135121495 56 CTCTGTCTAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGAAGAAG------AAAAAGAA chr4 + 94230402 44890382 44890381 44890443 44890382 44890381 44890443 62 CTCTTTTCCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAA ....x.::x.x..::...........................:....:------........ 48M6I8M 47/56 83.9% 62/94230402 0.0% 6/56 10.7% 90231058 NA +3077 chr4 + 190214555 135121445 135121444 135121488 44 TCTAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGAAGAAGA chr4 + 94230402 13073578 13073577 13073621 13073578 13073577 13073621 44 TTTTAAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGA .:.x...............xx:..............:....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 122047867 68166688 +3033 chr4 + 190214555 135121446 135121445 135121483 38 CTAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGAA chr4 + 94230402 75300454 75300453 75300491 75300454 75300453 75300491 38 CCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .:..................:.............::.. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 59820992 NA +3004 chr4 + 190214555 135121448 135121447 135121482 35 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGA chr4 + 94230402 48830778 48830777 48830812 48830778 48830777 48830812 35 AAGGAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGA ..::............................... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 86290670 NA +3110 chr4 + 190214555 135132386 135132385 135132530 145 TCCCTCCTTCCCTCCCTCCTTCCTTCCTTCTTCTTTCTCTCTCTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTTTC chr4 + 94230402 26784762 26784761 26784906 26784762 26784761 26784906 145 TCTTTCTTGTCTTTCCTCCTCTAATAGTGCATCTGCTCCTGGCGACAGTTTTATTCTGCTTAATGTTTCTCCATTTTTTTTTATTTCTCCTACTGAGCTGTATTATCCTCCTTTCCTCTCTTTCTTTCTTTATGTTCTCTTTTTC ..::..:.x:.:.:......::xx.xx.x.x...x:::..xx.xx.xx..:.x:::.x...xx.x::...::x...:.....x...:..:.x..xxx:.x:...x.::.x:.:.::::.............x.x......:.... 145M 82/145 56.6% 145/94230402 0.0% 0/145 0.0% 108347624 81866931 +3655 chr4 + 190214555 135132416 135132415 135132539 124 TTCTTTCTCTCTCTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTC---TTCTTTCT-TTCTTTCTTTTCTCTCTTTCTCTTTCTCT chr4 + 94230402 63697119 63697118 63697239 63697119 63697118 63697239 121 TTATTCCTCTCCTTTCCGGTGTT-------TTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x..:.....::....xx.x..-------....:::.:....:.:x..:....x....xx.....x.:.::xx.:...::.:....---x.......-.:.::........:....:..:...x.:. 23M7D57M3I8M1I29M 80/117 68.4% 121/94230402 0.0% 11/117 9.4% 71435297 NA +4446 chr4 + 190214555 135132420 135132419 135132577 158 TTCTCTCTCTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTTTCTCTTTCTCTCTTTCTTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCAT-TTTTGTCTTCTTTCTTTCTTCAAGACC-------CACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC ..:...x...:x..x:::.........:...:x..:x:.:x::...x:x..x........x.::..::.x:.:x.-..:.x...............:xxxx:.-------.x.:.:.:.x:......x::.:....:.....:....:.:.x...... 75M1D27M7D48M 96/150 64.0% 150/94230402 0.0% 8/150 5.3% 84956154 NA +3019 chr4 + 190214555 135132488 135132487 135132550 63 TTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTTTCTCTTTCTCTCTTTCTTCCTT chr4 + 94230402 15443653 15443652 15443715 15443653 15443652 15443715 63 TTCATTTGAAACTTTCTTATTCTCTTTTATTTTCCTCTCTTTCTCTTTTCCTCCTTCATCCTT ...x....xxx:..::.:x....:.:..x:...:..............::...:...x..... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 119688835 70525720 +3197 chr4 + 190214555 135132522 135132521 135132605 84 CTCTCTTTCTCTTTCTCTCTTTCTTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCT chr4 + 94230402 38895909 38895908 38895991 38895909 38895908 38895991 83 CTCTCTTT-TCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCT ........-..::..x:x.:::x..::...:.........x.x....:...:....:..x.x.x..x.....::..::::.... 8M1D75M 56/83 67.5% 83/94230402 0.0% 1/83 1.2% 96236613 93977942 +3183 chr4 + 190214555 135132545 135132544 135132641 97 TTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTC-----TTTCTTTTTTGAGATGG chr4 + 94230402 49829835 49829834 49829936 49829835 49829834 49829936 102 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTTTGGAGCTGG ....x..:.::x.xx..:x:.:..x.::x:..........:...........:....:..:.:.:.:..::..:x.x:x.-----..x:.....x...x... 80M5I17M 63/97 64.9% 102/94230402 0.0% 5/97 5.2% 85302710 NA +3390 chr4 + 190214555 135149241 135149240 135149312 72 GATACTTTTTTTTCAAGAGTATATTTTCAGTGTGTGTGTGTATATATATATATATATATATATATATATATA chr4 + 94230402 24295762 24295761 24295833 24295762 24295761 24295833 72 GACATTTCTGTTAGAAGAGAAAGCTTACAGTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACA ..:.:..:.x..xx.....x.x::..x..............:.......:......xx..x..::...:.:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 110853479 79361076 +3601 chr4 + 190214555 135152760 135152759 135152931 172 CTGAATCTAAATTAAATATATACATATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATA chr4 + 94230402 21109162 21109161 21109328 21109162 21109161 21109328 167 CTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-----GTTTCTGTGGGTGTACA ....::x..xx.x...x...x:x.x..x.::x....:..:.....x.x....x:::...x.:.:...::x::::....:x::...::x.:.:::...:..:x::.::x.x.........:.....:x.....::.::.:.::x.xx..:.-----:.x.x....x.....:. 150M5D17M 95/167 56.9% 167/94230402 0.0% 5/167 3.0% 114043598 76170957 +3130 chr4 + 190214555 135152775 135152774 135152844 70 ATATATACATATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATATGT chr4 + 94230402 41749097 41749096 41749166 41749097 41749096 41749166 70 ATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGT .....x...:.:.....x:.x.....xx..:....:....:....::.:::...::.:x.....x:.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 93403678 NA +3063 chr4 + 190214555 135152777 135152776 135152892 116 ATATACATATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATAT-GTGTATATATGTATATATATGT chr4 + 94230402 89812969 89812968 89813085 89812969 89812968 89813085 117 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGT .....x...x....:.:.....x.:x:..:x.xx:..:..:.:::x::x:x::..:....:.x:x...........:.........x..x..x.-:x..x.x....x.:.x::.... 94M1I22M 72/116 62.1% 117/94230402 0.0% 1/116 0.9% 45339808 NA +3012 chr4 + 190214555 135152784 135152783 135152836 53 TATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTAT chr4 + 94230402 55694456 55694455 55694508 55694456 55694455 55694508 53 TATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...::...:...:.:........:.......x:x:....::......:.:... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 79458328 NA +3212 chr4 + 190214555 135152804 135152803 135152858 55 TGTGTGTGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..::..:...:.::.......:.......x:x:....::............ 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 79458350 NA +4164 chr4 + 190214555 135152808 135152807 135152914 107 TGTGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATAT chr4 + 94230402 21109190 21109189 21109296 21109190 21109189 21109296 107 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCAT ..:x....:..:.....x.x....x.::...x...:...::x:::.....:x:.....:x...::....:..:x:..::x.x.........:.:.:..x....::.. 107M 69/107 64.5% 107/94230402 0.0% 0/107 0.0% 114043618 76170937 +3697 chr4 + 190214555 135152810 135152809 135152953 144 TGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-----GTTTCTGTGGGTGTACA ..:x....:........x.x....x:::...x.:.:...::x:.:.....:x:..:..:x.:.:::...:.::x:..::x.x...:.....:...:.:x....::...:::::.x.xx..:.-----:.x.x....x.....:. 122M5D17M 82/139 59.0% 139/94230402 0.0% 5/139 3.6% 114043620 76170935 +3617 chr4 + 190214555 135152830 135152829 135152939 110 TGTGTATATATATGTGT----GTGTGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATG chr4 + 94230402 21109190 21109189 21109303 21109190 21109189 21109303 114 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..:x....:..:.....----...x.::...x...:....:x:.::.:..:x::....:x....:..:.:..:x:...:x.x.:.:.........:..x:.:.::..::.:.:. 17M4I93M 68/110 61.8% 114/94230402 0.0% 4/110 3.6% 114043640 76170915 +3636 chr4 + 190214555 135152831 135152830 135152936 106 GTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTATATATGTAT------ATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATAT chr4 + 94230402 89812946 89812945 89813054 89812946 89812945 89813054 109 GTTTATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGT ..x.....:.xx....x....---::....:x:..x............x.:x..------...:.....:.x.:x:x::..::...:.x:x...................:. 21M3D30M6I52M 73/103 70.9% 109/94230402 0.0% 9/103 8.7% 45339885 NA +3111 chr4 + 190214555 135152831 135152830 135152943 113 GTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTG chr4 + 94230402 5214204 5214203 5214316 5214204 5214203 5214316 113 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ...:.x:.:.::x::..x.:::::..x::.....::::.x....x.::.:::.:..x..:......::..x..::.:.:.:.:::::x::........::..::.x....... 113M 60/113 53.1% 113/94230402 0.0% 0/113 0.0% 129938627 60275928 +3900 chr4 + 190214555 135152850 135152849 135152961 112 TGTATATATATGTGTATATATGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATA chr4 + 94230402 21109190 21109189 21109301 21109190 21109189 21109301 112 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:x....:......:.x.x....x:::...x.....:..:x:::.....:x:.....:x....::.:...::x::..:x.x.:.:...:.....:..x:...::..::.:. 112M 68/112 60.7% 112/94230402 0.0% 0/112 0.0% 114043660 76170895 +3041 chr4 + 190214555 135152931 135152930 135152984 54 ATATATATGTGTGTGTGTGTATATATATATATATATATATATATGTGTATATAT chr4 + 94230402 37579520 37579519 37579573 37579520 37579519 37579573 54 ATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ................:........x..::.:.:::.....xx....:.x..:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 97573411 92641144 +3663 chr4 + 190214555 135175994 135175993 135176067 74 GTGCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGTGGAAGAATCGCTTGAGCCCAGGCAGTAAGGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..................::........x:xx:x...x.:.....:.....:x:x.xx...:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 59142790 NA +3187 chr4 + 190214555 135182881 135182880 135182943 63 TGGTGATGTACAGATGGGTTTTTTGTGTGGATGTCCTTTTTGTTTGTTAGTTTTCCTTCTAAC chr4 + 94230402 34633436 34633435 34633497 34633436 34633435 34633497 62 TGGTGCTCTATAGTGGGGCTTTTTGTGTGGGTGTTATTTTTGTTTGTT-TTTTCCCCTCTCAC .....x.x..:..xx...:...........:...:x............-x...:..:...x.. 48M1D14M 49/62 79.0% 62/94230402 0.0% 1/62 1.6% 100549445 89665110 +3004 chr4 + 190214555 135205655 135205654 135205715 61 AAAAACAGAAATGTCTTAAAAAACAGAAAGATACTTTCTTTTTTTTTTTTTTTTTTTTAGT chr4 + 94230402 21624012 21624011 21624072 21624012 21624011 21624072 61 AATAGCAAAAATGTTTTGGGAAAGAAAGGGATGCTATCTTTTTTTTTTTTTTTGGCTGAGT ..x.:..:......:..:::...x.:.::...:..x.................xx:.x... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 113581643 76632912 +3117 chr4 + 190214555 135219470 135219469 135219571 102 TCTTCTCCTTCTACTGTTCTTCCTCCTCCCTCTCCTTTTTATTTCTTCTTT------TTGTTT------TCTTCTTTCTTATCCTTCACTTTCTGCTTTCTCTTCTTCTGAAAA chr4 + 94230402 34734802 34734801 34734915 34734802 34734801 34734915 114 TTTCTTTATTATAATGATTTTCCTTCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTTTAGTAAA .:.::.:x..x..x..x.:.....:...:..........x.....:.:...------..:...------.x..:...:..x.x...:x:....:x..x...:.x:..:x.x... 51M6I6M6I45M 70/102 68.6% 114/94230402 0.0% 12/102 11.8% 100484668 89729887 +3564 chr4 + 190214555 135231108 135231107 135231213 106 ATAATCCAAAGATCTTTTTCCCATCTATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA-CACACACATATATATACATAT chr4 + 94230402 23247701 23247700 23247806 23247701 23247700 23247806 106 ACAATCCAA-GATGACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT .:.......-...xx:..xx....x.:.:...::.:.:.:..x...:x.:....:........:...........x:x.x.x.x:-:...::x...x.....:.... 9M1D75M1I21M 72/105 68.6% 106/94230402 0.0% 2/105 1.9% 111983407 78231148 +3036 chr4 + 190214555 135231145 135231144 135231184 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 130822063 59392492 +3086 chr4 + 190214555 135231151 135231150 135231221 71 TATATATATATATACACACACACACACACACACACACACACACACACACATATATATACATATACTTATAT chr4 + 94230402 74526053 74526052 74526123 74526053 74526052 74526123 71 TGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT .:..x..xx.x.x....xx.x.:x..............::x...:.....x........:....:x.:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 60705098 NA +31424 chr4 + 190214555 135248762 135248761 135249470 709 AAGAAGAAAGAAAAGTTTTAATACATTAAAGCTCTTCGTTTTACTGTTCAGTT-------TTTTAGTTAATTTAATGTCCTAAGAATTCACACAGGGGCTTTGGCAGTGGTTGTGGCATTAAACTGCATTTTAAGTGCCTGTGTAAGATGCAACAACATCATTACCTTGAATGAAAGTTCAAGAAGAACACTCTGTTGGGAGTATTATAGTATCTGACATGAAGAAAATAATTCATGAGTACTCTTCATAAAATTAGCTTTATTTCTCCATTCTAGAATAAATGATAGGGCATTCGAAAGAATACATCCTAAATCAGTAGCAAGCTGCCCCTCCTAAATCTCAATAACTGTCTGGGGTAATCTTCGACAGCTGGGTGCTATTAGGATTTGTTCTAATGGTGACAATGTGGAATACGCTAACATGGGGCTTATTGCCACTTATCCAGCAGGGGCATGAAATGAGGTGACATGGTAATGAGTTGATACAAATGACTTTTGTAACTTTCACACTGCTACCAGGCTGAGGCAGGCAATCAGAGGGAAACTATTGTCTGCCTTTC-GTGACGGTTTTAATGTGTTCCATTTGATTTAATGCTGCTGGTAGGCAAAATGTGAAAGGAAAGTAGGTCACTGCTTCTTTGCTTTGC----------------TCAGATAACAGGGAA-TACTTACCTGGTTTATCCTAAGAGTTATATTTATTCTCGCTAATGACAAAGAGA chr4 + 94230402 28949751 28949750 28950475 28949751 28949750 28950475 725 AAGAAAACAGCATTGTTCTAATACATTGAAATTGTTCAGCTCTCAGTTCAGTTCTCAGTTTTTCAAATAATTCAGTGCCTTTGGAAATCACACAGAAGTTTTGACCAACAACATGGCATTAAGCTGTATTTTAAATGCTAACAGAAAATGCAGGAACATCGTTACCTTGAAGTAAAGAGCAAGAAGAGCATTATACTGAGAGCATTATGTTGCCTTTTG-GAAGGAAACAATTTGTGAGTGCTCTTCATGAAATTAGCTTTATACCTCAGTTCTAGAAGAAACGACAAAATTGTCTACAGAATCTGTCCTAAATCAGTGGAAAGCTGCCCCTCCTAAATCTCAATTACTGCCTAGGGTAATCTTCAACAGCTGGGCACCGTCAGAGTTTGTACTAATGGTTATACTGTTGAATCCTCTAACCCATAGCTTATTGCTACTTATCTCACATGGGCTTGAAATGAGGTGACATAGTAATAAGTTAATACAAATTACTTCTATAACTTTCACACCACTTCTAGGCTGAGGCA-GCAATCAAAGGAAAGCTATTGTCTGCTTTTTAGAGATAATCATAATGTGTTCAATTTGATTAAATATGGCTGTTTATTAAAATAGTAGAAGAAAATGTGTAAGTGGTT-TTCACTCTACACCTCCTCTCAATCTTTCTGGTTATACAAAATTACTTACCTGGAT-----TAATAATGGTATTTATT-TTGCTGATGAAAGAAAAA .....:.x..x.xx...:.........:..::.x...:x:.:x.x........-------...:.:x.....:.:..:.:.x:...x........::.:....:.x:xx:x::.........:...:.......:...:x:::x..:.....:x......:..........xx....xx........:..:.x.::..:...:.....:x.::..xx::-....:...:....::.....:........:.............x:...x:........x...:..:.::::xx..x.x.....x::............:.x........................x....:..:...........:.........::.::.:..::.....x........x.:.x...x....x.x.....x::x:.........:.......:x:..x....x................:.....:....:........x....:.:............::..x.:...........-.......:...:..:...........:...:-.x..:::.:x..........x........x...::x....x.x:x:.....:xx.:.:....:.:x..x.x..x..-..::..:.:.----------------..x.:.x.:.x::..-...........x.-----...x.:.x:........-.:...:....x.:.:.:. 53M7I159M1D308M1D31M1I76M1D10M16I15M1I13M5D17M1D18M 511/700 73.0% 725/94230402 0.0% 34/700 4.9% 106299011 83915544 +3088 chr4 + 190214555 135261795 135261794 135261874 80 CACCTTTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATGGCTTGATTCCAGGAGTTTGATGCTGTAGTGCACTGTG chr4 + 94230402 76033207 76033206 76033286 76033207 76033206 76033286 80 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ...x.x.:..:...........::........x:xx.x.:.xx:.....x:....:..:..x:x.......x:..:x:.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 59228588 NA +8655 chr4 + 190214555 135264528 135264527 135264879 352 AAAGGA--AGATTTTTATCATTAAAT-TTTAACCGGC-AATGGATG-TGTACAGCTTCAAA-AAGCT---GACATGATTTTACCTTCAAATTCTTTTTCCTCCTCAA---------ATATTAAAGGTATTTGCAGATCCTTAGAGCTGTTTGTCTACTTAGCCAAGTTAAATTAAAATGCAAGCT-------GATAATCTATTGTTATATTATTTTTCCAATATTGACAATCAG-TTCCCTTTTATAATGAACTTTTTCCTGTGCTAGCTACTTCAAATCTTTTTATCCTGTACCCATA------GGATTGAACATGATTATGAAAGATAAACCTTAGTAATAAAAGATGAAAAGAGGTTATGACATTCTTATTAAACAGAAAA chr4 + 94230402 28958246 28958245 28958625 28958246 28958245 28958625 380 AAAGGACTAGCCTTTTGTTATTAAATATTTAGAAGACTGAGAGATGGTGTAAATGTCCAAACAAACTAGTGTCATAGATTCACTTTCAGTCAGATTGCTACCATCAGTAGTAAAGGATAGAAAGGGTATTTGCAGACCCTTAGAGTTACAGCTTGAATTAGCTAAGTTAAATTTAAATATGAATCTCTGTAGGATAATAAATTCTTAGATTATCTTCTCAATATTGACAACTAGACTTCCTTTTAGAAGGAA-TTATCCCCAAGC-AGC-ACTTT-ACTCTTTTTATCCTGTACCCTCAGTACAGGAAGTAAAGATAATTAGAACTGGTGAATCCCCATAATAAAAGAATACCAGAGGTTATGAGTTTCTGATTAACTAGAAGA ......--..x:....:.:.......-....:xx.:.-:.x:....-....x.xx.:....-..:..---.x...::x..:..:....:x:xxx..x::x:.x...:---------...xx..:............:........:.::xxx.:x.x.....:..........x....:::.:::-------......xx...x...x.....:..::............::..-:.:.......x..x...-..x.:..::x..-...-....:-.x..................x:.------.:.x.:..x..:....x:.xx.:.:..:.::x:..........xx.xx...........xx....x.....x:....:. 6M2I18M1I10M1I8M1I14M1I5M3I37M9I69M7I42M1I17M1D12M1D3M1D5M1D23M6I79M 244/348 70.1% 380/94230402 0.0% 36/348 10.3% 106306282 83908273 +3078 chr4 + 190214555 135273408 135273407 135273450 43 AATGCACACACACACACATACACACATATATATATAATTAATT chr4 + 94230402 67195542 67195541 67195584 67195542 67195541 67195584 43 AAGGTATATACACACACACACACACATATATATATAATAAATT ..x.:.:.:.........:...................x.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 68077866 NA +3098 chr4 + 190214555 135289036 135289035 135289105 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 59255839 NA +14529 chr4 + 190214555 135297367 135297366 135298224 858 TTTCCTTTGTAATTCAAGCAGCTGAA-----TACTTAATTAATTATGCATTTCAATGGAATTGAACATGAAGGTAAAGCCAAAAAGAAATAGGAATAAATCTGTATTATTAACTAACCAAAGAGCAAAAGGATCAGACCCTACCAAATCATACTCTGTACAGTATATTAACTCTAAGTCAGTAAAACTTTTTCAAATGGAAAGGGTAATGATAAATTGTTTTAAGCACGTACATGAGTGCATGGACTTCTAATAAAATATTCTGACCCAGTAATGTTTAAAAACCTGCTGATCTCAATTGAGCAGAAAGATTACCAAATTAAAAAT-CATTCATAAAGTGATTGAGTCTCATTTCTGTCAG--ACTCATGGTAGAAA-AACTTTACCAGCTCTCCCATATATTAGAAGAATTATTTTATTTTATGTAGTTGCTC---------ATAGAGCAAA-----TACAGTAAAT-----CGAAAAGCAT-----CAGAAATACTT------------------------------------AAAAAACACCTAATTA--------TAGAGCATTTTTAATTTAGAAGGGAGACTTGCTTT------CTGAACCTATATGACACAAT----AATAAATTGAAAGTAATAAATTACTTTTTGGATTTATGAAATGAAA----AACATAAGACAATATGAAATTTAGACAACCTTATATAATTAAGAACTAATTTTAAATTACATTTGAACATTAGACTTAAAACTTTGATTTACACTAAATAAGAAATGAAGGAATAAAATCAATTAT-----------TCTGGCCTTCATGGAT-----TTTAAATAACTCCAAGCGAACGTTAATATTTGAGGTGA-GTTTGAAGGGGGTCTCATCTTTTACAAATTGCATAGTACTAACCAGGAAAGTGATAGCACTTACAACACTGCTAGTTTTTCAATTAACCATAATA chr4 + 94230402 28968848 28968847 28969771 28968848 28968847 28969771 924 TTTCCTTTCTAATTTATCCAGCAGAACAGTTTACTTTATTAATTATTCATTATGGGGAAATCAACTTTGATTTTGATG-----ATTAAAGAGTCAGAAAAATATAATGTTAACTCACTTGCAAGCAGAAAGTTCAGGGCCTATTGAATCAAACTTTGTTCAGTAAATTAACTCTCAAAACGTAAAACTTCTTCAGGTGGAAAGGGCAATGATGAATTGTTTTAAACAAGAACGTAAGAA----------GAACAAAATGTCCCAACCCATGCATGTTCACCAGTCTGCCAATCTCAACTGAGCAGAAAGATTGCCAAATTTAAAACACACTGGCCAGATGACTGGCTCTTATTTCCAGCATACACACATGGTGCAAATAACTCTATTAGCATTCATATACATCAAAAG--TTA-TATGTTTTACAAGACTCTTCTTCAAGGATATGGAGCAAAACTACTACTGTGAGTGTTGCTGAGAAGCACATTTACACAAGTGCACTGGATGCAGCAAGTGTTGAGGTTCTGTAAGGAGGAAAAGAGACTTTTAATTATTACATATTACAACAGTTTGGAAAGACAAGGTGTACTTGATTTATTTTGCTAATACTGCATGACAGTGTTGCAAATAAATTGAATAGATTGCAGTATT-------TTTAAAAGGTGACAATATACCAAAAAATAATATACAATTTGGCTCACAGTTGATAATACAATGGTATGTT----TTACATGTGAAAGGTAAATTT---ATTTTTTGTGGCTTTGAGTGAAGTCTGATGAAATGAAATAAAATGTAATGAGATGTGCCCAGACTTAGTGGGTTTTTCTTTTCGTAGCCTGGAGGTATTCTTAGTGTTTCTGTTGACTTTTGGAATCGGTTTAGACTTATGCAAGCTTTGTAACAGTAACCTGTAAAGATGTTG----------ACTAGCATATTTTCAATTAACCATGACA ........x.....:.xx....x...-----.....x.........x....x:::x.:...::.x:x...xxx.:.x.-----.xx...x..xx.x...xx.:..x.:......x..:x:x:....:..:.x....:x....:::.....x...:...x.....x.........x.:xxx.........:....::.........:......:...........:..x.x..:.:..x:----------x..:.....:.:.::.....xxx.....:.xx.::....::.......:..............:.......x....:-..:.x::x.::...:..:x...:.....::x..x--..x......:x...-....:..::...x:..x:...:..:.:...--...-.x.:.....::x:::.x:..---------..:.......-----...x..:.:.-----:..:.....:-----..x..:.:.x:------------------------------------..:.:..x::......--------..x.:..x...x:.xxx.x....x:x.....x...------..:.xx..::......xx:.----...........x:x.x.:x.x..:.-------....x:.::...x.----.x..x..:.:.....:x.....:.x:x..xx.xx.....xx.:x:x..xx..----......x....x:x..:.:..---.:...xxx.x:.x:.:.:.:.::xx...x.:...:....x..x.:.-----------:.::.x...x:...:.-----...xx:..:.::x:..xx.x:x...:.:...xx.x...-x....:.:xx...:.x:x...x.:...::.x::..::.x.....x.x....xx:.x.----------...:x:.xx...............:.:. 26M5I47M5D156M10D77M1I34M2I14M1I30M2D3M1D20M9I10M5I10M5I10M5I11M36I16M8I35M6I20M4I25M7D14M4I52M4D21M3D46M11I16M5I38M1I57M10D28M 532/816 65.2% 924/94230402 0.0% 150/816 18.4% 106328519 83886036 +3257 chr4 + 190214555 135305592 135305591 135305727 136 TTTCTCTTTAAATTGTGTTTTTATTTTTTACTTTGTGTGTGTGTGTGTGTGTGTTTGTTTTAATTT---CTGATCCACTGTTGGTGGAATCCATAGATGTGGAATTCATGGATACAA---TGGGCCA-ACTGTATATATATGT chr4 + 94230402 84631330 84631329 84631464 84631330 84631329 84631464 135 TTGCACTTTGTCTTTTTTGTTTTATTTTAATTTTGTGTGTGTGTGTGTGTATACTCATTTTGATTTAGATTTATGCATAATTTTCATAATT--TAGATGTAGAA------AATGCAGGCTTGGTCTATACTATATATATATAT ..x.x....:xx..x.x.x...xx....x.:...................:.::.::....:....---:.x..x..:x:..xx::x...:--.......:...------:..:..:---...x.:.-...:.........:. 66M3I22M2D11M6D7M3I7M1I15M 90/128 70.3% 135/94230402 0.0% 15/128 11.7% 50674262 NA +3082 chr4 + 190214555 135364921 135364920 135364992 72 GCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCCCTTGCAACCAGAAGGCAGAGGTTGTGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:.........:.::........x.xx.x...x.x....x.x.......x:xx:..:...:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 59331715 NA +19962 chr4 + 190214555 135402273 135402272 135403145 873 CAGAAGACAGGGGACAACCTGCTTATCGAAGGTAAGCCAAATTATAATTCAACAACTAGAAAAACTCATGCAAACTATTATAATTGTACTGATACTTGGAAACTTTGTTTTAT--GATTTTGAATCATATAGCAGGAAGCACAGATGGAGG-AATGATAACAT---GAAAATTTCCACTTGAAATAGATTAAATTCAATAATCATACTGGATTTCTAATGTATATAAGCACACTCTTTATAACCGGTAGAGGCATCCTGCTTGCCTCTTAGTGATAAATGCTCTGATTTTGTGTGTCATTGCATCTCATTTCATATCTTGGCAGGATGTAATAATTTCATAATAAATGAAAACATATTTAAGCACATAGTTGGATGCAAACAGCAATTGGTAATCTTCCATATTTATTTCATTTCATTCCATTTATAGTTGCACTTGTAATTAAGAAGAGAGTAAACTAATGATGCTTGGGCCCATATACCAGCATAACCTCA-AAAATACTGGAAAAATCTAATCAAATGAAAATTTTGTTCAAATGTTAGTG-------------TTTCAAGCAAAACATTATTTTTTATATTTAAAATACTTTTAGTTGGTAAATTAGAGCAAAATCTATTTAAAATATTAAGTCAAAA----GTGAATTTA-ACCAAAACATAAA-----TCTGAAGCAAATGTTATTATGAATAATTTTCAGCCTAGCTACTCTTTGAAATATGCTTCTAGGT---GCATATAACAAATGCGGTAATACAGAGGATAGAAAACCATTCAAC-ATTTCTCTAA--GATACAAACTTATTATGGAAATAGAATGTCATAAAACAAGCCGCTT-------AAGTCAGTATA---AATTATGAATCCTAAATATTGACCTAAATTGCAGTTCTTATGTTTTGTTAGAG chr4 + 94230402 29006892 29006891 29007785 29006892 29006891 29007785 894 CAGAAGGTAGGGGCCAGCTTGCTTGTTGCAGGTAGTCCAGGTTGCCACACACCAGCTGGAACAATCCCTAAGAAAGTAAATAATTGTAAGGTTATTTCAGAACTTTAAATGATAAGATTTTAAATCTCTTAT--GTGAGCACAGATGGAGACAATGCTGTCACTGCAAAGGTTGCCATTAGAAACAGATTGAGCCCAATAATCAGACTGGACTGCTAATGGCTACAAGTACACTCTGCCTAACTAGTACTGGCAGGATGCTTTCCTTGCAGTGATAAATATACAAGCT----GTGAC-TTGCATTTCATTTTCAACCTTGGCAGGCTAGAATAATCTGTTAATGAATGAAGACATCTTTAAGCATGCAGTTGTGAGCCAACAGCAGTTGGTAATCCTCCATATCCATTTTATTTCATTCCATTTACAATTCCACTTATAATCAAGCAACGAATAAACTACTGATGCTTGGCCAGCAATACCCATATGACCTTAGAAAGTGTTTGAAAACTGCAA--AAAAGCAAAGCATGCT----TGTCATTGGCATTGCTTACATTTTCAACGTGCACA-CAAGTGGCGCATTTGAAAGTCATTCTGAAAATAAATTTTAGCAAACTCAACCAAAACTTTTATTATTAAACATGGTGTATACACACAAACACACAAAAGCTGTTTGGA--AATTGCTACTAAAAATAACACTTAGTATGAGATGTTTCTGTAGTTCACTTTTTGACATAGCGTATAACAGAATCAGTAACAGAATGCATAACAAACAAT--AACAATTTCAGTAAACGCCAGAGATGTATTTTTTCACTATATTGTCACTAAAGAGACAATTCTACAGAAAACTTTGTTTATATAATTCTCAATAATAAATAT-----GAAGTTGT--TTCTTATTTAGTGTTAAGG ......::.....x..:.:.....:.:.x.....:x...::..::x.:x..x..:..:...x..::.x.:x:..xxxxx.........xx.x..:..x::......:xx.x..--......:....x:x..x--.x:.............:-....x.:x..:---:..::..x...:.x....:.....:.:::.........x......:.x......xx..:...:.......x:x....::...xx....xxx.....x...:x:..........::x.x:::.----...x.-......:......:xx.:.........x.:x......:.xx....:......:....x........:::.....x:x..x.......:.........:.......::....:...............:.:..x.....:....:...x.:x..:.......x..........x.xxxx.....x::..:....:.-...:.::.x.....x.x:..--...x.x...x:x..:.----...:.x..-------------......xxx:x...-:.xx.xx:::....:...xx.x..:x.xx::......xx......x..x.::x...x.x...xxx:x...----...x..x:.-..x..x...:...-----.:..:.--..x..:..:..x:.....:x:.:..:x.::xxxx.:.:..x.:.x::...:.x.::---..:.......:.xx.:....:.x.:x.x...:x....x..--...-.....xx...--.x:.x.:.:x....x.xxx.x..x.x.....:x...x.::.x::.:-------..x.:x..x..---....x.x...xx.......-----x..:...:--.......x.xx.....::. 113M2I17M2D17M1I11M3I122M4D5M1D195M1I20M2D16M4D8M13I14M1D70M4I9M1I13M5I6M2D56M3I40M2D3M1I10M2I46M7I11M3I19M5D8M2D19M 566/848 66.7% 894/94230402 0.0% 71/848 8.4% 106395381 83819174 +3223 chr4 + 190214555 135417001 135417000 135417117 117 TTCCCTTTGTGTATATGTATGTATGCATATGCA------TATATATATATACATATATATATATATATATATACACACACGTATATATATATATATATATACACACACACGTATATATATATA chr4 + 94230402 54005644 54005643 54005762 54005644 54005643 54005762 119 TTACTTATGTGTGTA---ATGAATGCAGAATCAACAAATTATAT-TGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATA ..x.:.x.....:..---...x.....x.xx..------.....-.:x.:......:...x........:..........::.:.x.x..x.:.x:xxx.:....x.x.xx..:....:.... 15M3D15M6I5M1D78M 80/113 70.8% 119/94230402 0.0% 10/113 8.8% 81411357 NA +3358 chr4 + 190214555 135419116 135419115 135419170 55 ACATATCTTTATGTATACATATATGTGTGTGTGTGTATATATATAGAGAGAGAGA chr4 + 94230402 49681669 49681668 49681722 49681669 49681668 49681722 54 ACACAT-TTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGA ...:..-.....:..x.:.......:..........x.:....x........... 6M1D48M 46/54 85.2% 54/94230402 0.0% 1/54 1.9% 85737447 NA +3223 chr4 + 190214555 135437565 135437564 135437639 75 TATATATGTGTGTGTGTATATATATAAACATATATATAAACATATATAAACATATATATATGAACATATATATAA chr4 + 94230402 56867291 56867290 56867364 56867291 56867290 56867364 74 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACAA ....:..:.-.......:x...:...x.......:.:x..:....x.:x:...:......::.::..:..:.:.. 9M1D65M 52/74 70.3% 74/94230402 0.0% 1/74 1.4% 78570274 NA +3540 chr4 + 190214555 135439792 135439791 135439873 82 GTGGTGATGCTCACCTGTAGTCCCAGCTACTCTGGAGGTTGAAGTGGGTGGAATACTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:x::...:...:x:xx...:.::......:.....:..x..x:.....:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 59406591 NA +3496 chr4 + 190214555 135443019 135443018 135443120 102 ATGCATGGTGGTGTGCACCTGTAATACCAGCTACTGGGGAAGGTGAGGCATGAGACTCACCTGAACCCAGGAGGTGAAGGTTGCAGTCAGTTGAGATGATGC chr4 + 94230402 76033194 76033193 76033287 76033194 76033193 76033287 94 ATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGC ..:..::......--...x....:.x.........x.::.:.x....x.x..x..xx...:.........:..x.xx:..:..:..------:.x....... 13M2D71M6D10M 68/94 72.3% 94/94230402 0.0% 8/94 8.5% 59409825 NA +3733 chr4 + 190214555 135445513 135445512 135445608 96 CACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCCAGTGGATCACTTGAGGCCAGGAGTTTGAGATCGCCTGTCCAACATGGTG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT----TGGGCTGTAGAACATGATG ........:x..:.--....:.:.....xx:...::........x..x...:.x.......:x....:..:..----.x.x....xx......:.. 14M2D57M4D19M 67/90 74.4% 90/94230402 0.0% 6/90 6.7% 59412316 NA +3197 chr4 + 190214555 135447020 135447019 135447158 139 CAAGGCATTTTAAGATCTA---TTAAAGATAATTATTTTA-----TTTCTAGAACATAAG-GTTCTAGCATTAAAACACATTTGAAAGAAACCTTTTTTTCTTTTTCTTTCTGCTTTTTTTGCTTTTGTTTTTGTTTTGTTTTGTTTT chr4 + 94230402 79271625 79271624 79271763 79271625 79271624 79271763 139 CAAGTTACTTGGATATCCAAAGTTAAATATATATATATTAGGAGTTTTAAATAACTTAAGTGGCCCAG---------ACTTTTATTGGAAATGTGTTCCTCCATTTCTATCCTTTTTTTTTTCCTAGGTTTTTGTTTTGTTTTGTTTT ....x:.:..x:.x...:.---.....x...xx...x...-----...xx.x...x....-.x:.:..---------..x...:xx:....:x.x..::..:x.....x..:x:.......x.:.xx..................... 19M3I18M5I15M1I7M9D71M 92/130 70.8% 139/94230402 0.0% 18/130 13.8% 56175395 NA +5179 chr4 + 190214555 135461589 135461588 135461763 175 CTCTATAGACTTAATGATTTAGTGCTGCAAAATGTTTAAAGATACTTTGAATAAATATTGATTCTTGGAACTCAGCCAATCTCTGAAAAGAGTATTGTT----AAGACT-TGACAGTGAACTGAAAAATATATATTTCTCTTTAACCCCAAAATCTACTCACAGAGTAGTAAGTAAAAGA chr4 + 94230402 29037793 29037792 29037970 29037793 29037792 29037970 178 CTCTATAAACTTAATGTTCTAGTTATATAAGAAGCTTAAATATGCTGTGAATAAATATTGATTTCTGGAGCTCAGCCACTTACTATAAGGTTGATGGCTGTAAAATACTGTTAGAGAAAGATAAATAATATTCATTTTTCCCTA--CATAAACCTTTATTCTAAATTATTGAGCAAATGA .......:........x.:....xx.::..:.x.:.....x..:..x................::....:........x.:x..:x..:.xxx..x.:.----..x...-.x.x..x:.:x.:..x.....x:....:..::..--.x:...x::.xx.:x:.:.x..x.:..:...x.. 99M4I6M1I34M2D34M 116/173 67.1% 178/94230402 0.0% 7/173 4.0% 106423796 83790759 +3701 chr4 + 190214555 135488660 135488659 135488733 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCATGTGAACCCAGAAGGTGGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx.x...x..:x............x.xx:.:...:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 59455456 NA +3168 chr4 + 190214555 135508881 135508880 135508939 59 TGATAAATTGAAATGTATGTTCTCTCGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 62489207 62489206 62489265 62489207 62489206 62489265 59 TGAAAAACTTAAATGCATATGATCTGCTCCTTTTTTTTTTTTTTTTTTTCCTTCTCTTA ...x...:.x.....:..:.xx...xx.:....................::..:.:... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 73019674 NA +3165 chr4 + 190214555 135516236 135516235 135516313 78 TCTCTCTCTTTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGCACGTGCACGCATGCATATCTTTCTTAATGTACTGT chr4 + 94230402 60831530 60831529 60831607 60831530 60831529 60831607 78 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGT ...x.....x...........x.....:.:.:.....:.:::...::....:.x.x:.x..x:x.:.xx...xx.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 74684706 NA +6113 chr4 + 190214555 135545684 135545683 135545903 220 ACATGCATTGGAAGACTATTTTTGCAAG---TTTTAAACAGATGGTTTTATATCAGAGATTTTTATAAAGACAGAGAACAAATAGGAGTAAGTTTTTCA-TGGCCAAATTGTCTTTTGCTGTATGAATTTCTGCCAATTCAAGCATACTGAATGTATTTCTCTCTGAAATTATA-------------TTTCACAACTTGTAAATGTGTGTATGTCAATTTCAAAGACTGCAGTTGCT chr4 + 94230402 29096092 29096091 29096327 29096092 29096091 29096327 236 ATGTGTGTTGGCAGTCTATTTTTATACAGCTTTTTAAACAGATGGTTTTAGATCAGTAAAGCTTAACAAGACGCATAGCAAATGAAAATAAAATCTTCACTAGCAATATTGCTTTTCATTGCCC-AGTTGCTGCCAACTAAAATATATTAGACCTATCTCTCATTAAAAAAACAAGAAAAAATGCAGTTTCAGAATTCCTAAGTGCACACTTATCAATTTACAAGAGTACAAATTCT .::..::....x..x........::.x:---...................x.....x:.xx:...xx.....:x.x.:.....:::.:...:x.:....-.:..x.x....::...:::..:x:-.:..x.......:.x..::...:.::.:x...:....x:.:...xx.:.-------------.....x..:.:x...:..:::::x.:.......xx....x.:..:x.x.. 28M3I68M1I24M1D49M13I50M 142/219 64.8% 236/94230402 0.0% 18/219 8.2% 106449592 83764963 +26050 chr4 + 190214555 135548727 135548726 135549143 417 TGCAAGGAAGTCTGAGAAGTAGGCCACCTTCTAAGTACAAGGAGAATTGCATATAGTACAGCTTTAACTAGCACAGCATTTCATTCAAGAAGACTGCTTCAAGACTTCATTTAAAATTATCAGGGGCACATTATCTGGGTACACAACAAGAAGCAATTATTGGTTTAATTAGCCAGCATTCACCACATCGCCCTCTTTCTCTTTGTTCGATTGCCAGGCAATTTTCTACAATCATTAAGCAAGGGAACTATAATTCCACAATGACCTAATC-TCAGCTCTTTCTTATCACATTGGAATATTTTAAAGTTATTTATGACTGTCCTCAATAAGAACTAAGTCCATTGGGCAGAGAACACTTC-AGGCTTAAAAATTCAAAATTCTTTGTCATATT-CTAAATCTTTATTATATTTAATAATC chr4 + 94230402 29099192 29099191 29099605 29099192 29099191 29099605 414 TGCTAGGGACCTTGAGAAGTAGGCCAGTTTCTAAGCACGCAGAAAGTT------AGTGAAGCTTTAACTAGCACAGAATTTCATTCAAGAAGTCAGCTTCAAGACTTCATTTAAAATTATCAGGGGCACATTATCTGGGAGCACAACAAGAAGCAATTATTGGTTTAATTAGCCTGCATTCACCATGTTGTGCTCCTTCTCTTTGTTGGATTGCCAAGCAATTTTGTAAAATCATTAAGCAAGGGAACTATAATTCCATAATGACCTAATCTTCAGCTCCATCCTATCACACTGGAATATTTTAAAGTTATTTATGACTGTCCTCAATAGAAGCTAAGTCCATTGGGCAAGGCACACTTTGAGTCTCCAAAATTCTGGATGGCTTCTCTTACTGACATATATTTGTCCTATTCAGCTATC ...x...:.x::..............x:.......:..:x:..:.:..------...:x.................x...............x.x............................................x:.................................x..........::.:.:x...:...........x........:........x..x.............................:............-.......:x..:.......:.....................................::.:................::.x......:-..x..:x.......x::..xx:..x..x..:.-x:.x..x...:.:x....:.::x... 48M6D217M1I88M1I32M1I26M 345/411 83.9% 414/94230402 0.0% 9/411 2.2% 106449535 83765020 +3709 chr4 + 190214555 135563229 135563228 135563289 61 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACATGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:...........::........x.xx.x...x...x.........:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 59530025 NA +3116 chr4 + 190214555 135610252 135610251 135610287 36 GTTTTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT chr4 + 94230402 72938553 72938552 72938588 72938553 72938552 72938588 36 GTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT ...x................................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 62671699 NA +3003 chr4 + 190214555 135627662 135627661 135627714 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 112379940 77834615 +3036 chr4 + 190214555 135627677 135627676 135627716 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 131218595 58995960 +3229 chr4 + 190214555 135633439 135633438 135633563 125 TATTGGAGATATATATATATATGTATATATACACACACACACACACATATATATACACATACATATATACACACACACACACATATATATATATA-------TATAATTGTGATAGCTCTTCTTGTTGAATT chr4 + 94230402 54005682 54005681 54005802 54005682 54005681 54005802 121 TATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGT---------CCTGT-TGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAG-TTTGTGTGTTTAATT .....:.x.:....:...x...:....:...............x.x..x.:.---------.x.:.-.:....x.x.xx:......:....x:..-------....xx....x...-.:.x:x....x.... 52M9D5M1D28M7I14M1D15M 84/114 73.7% 121/94230402 0.0% 18/114 15.8% 81627757 NA +3040 chr4 + 190214555 135633440 135633439 135633488 49 ATTGGAGATATATATATATATGTATATATACACACACACACACACATAT chr4 + 94230402 4409074 4409073 4409122 4409074 4409073 4409122 49 ATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACAT ....::.x.:..:........:......:.......x.x.......:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 131224366 58990189 +3033 chr4 + 190214555 135633441 135633440 135633491 51 TTGGAGATATATATATATATGTATATATACACACACACACACACATATATA chr4 + 94230402 25262927 25262926 25262977 25262927 25262926 25262977 51 TTGGAAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATA .....:.x.x:..x............x......:.:..x:........... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 110370514 79844041 +3134 chr4 + 190214555 135633442 135633441 135633501 60 TGGAGATATATATATATATGTATATATACACACACACACACACATATATATACACATACA chr4 + 94230402 61270776 61270775 61270835 61270776 61270775 61270835 60 TGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:.x....x.:..............::...::.....x....x:..:....x::.:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 74362666 NA +3163 chr4 + 190214555 135633462 135633461 135633527 66 TATATATACACACACACACACACATATATATACACATACA--TATATACACACACACACACATATATA chr4 + 94230402 54963193 54963192 54963260 54963193 54963192 54963260 68 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA .:.....x..:...x.::.....x......:.....:...--:.::.:.:.x..:........x.... 40M2I26M 49/66 74.2% 68/94230402 0.0% 2/66 3.0% 80670269 NA +3160 chr4 + 190214555 135633481 135633480 135633532 52 ACACATATATATACACATACATATATACACACACACACACATATATATATAT chr4 + 94230402 12852056 12852055 12852107 12852056 12852055 12852107 52 ACAAATCTGTAAACGCATATATGTATGCACACTCACACACATATATATTTAT ...x..x.:..x..:....:..:...:.....x...............x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 122781425 67433130 +3059 chr4 + 190214555 135638805 135638804 135638850 46 TTTCTTTCTTTCTTTCTTTTTTTTTTTAGAAATTTGAAGGAAGTTA chr4 + 94230402 21794605 21794604 21794650 21794605 21794604 21794650 46 TCTCTCTCTCTCTTTTTTTTTTTTATTAGGAATTTAGAGGAAGCTA .:...:...:.....:........x....:.....::......:.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 113844200 76370355 +3020 chr4 + 190214555 135668244 135668243 135668303 60 TGCTATAAATTTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCATCTG chr4 + 94230402 64826642 64826641 64826701 64826642 64826641 64826701 60 TGACATAGATTTATTTTCTGTATGTGCGTGTGTATGTATACGTATATATGTAACTTTCTG ..x:...:.......x.x...:....:......:...:.::..:.:.:...:.::x.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 70841602 NA +4120 chr4 + 190214555 135671597 135671596 135671745 149 AAGTTTGTTTTCTGTTCCATAGTCTGTCTTTCTC--TTCTCTTTTTTCTTTCTTTCTT-------TCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTT--------------TCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 50176243 50176242 50176414 50176243 50176242 50176414 172 AGGTTTGTTTCTGGCAAGATGGATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .:........::x.:xxx..:.x:.x...x....--.x....::......:....x.:-------.:..x.x.:x..::..::x......x.x.::x.:...x.:.............--------------:.x...::..x.:.....::.......:..:.:.x..... 34M2I22M7I53M14I40M 100/149 67.1% 172/94230402 0.0% 23/149 15.4% 85495354 NA +3344 chr4 + 190214555 135671600 135671599 135671734 135 TTTGTTTTCTGTTCCATAGTCTGTCTTTCTCTTCTCTTTTTTCTTT------------CTTTCTTTCTTTCTTCCTTTCT-TTCTTTCTTTCTTTCTTTCTT----TCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTT chr4 + 94230402 64726434 64726433 64726585 64726434 64726433 64726585 152 TTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ..::.::.:..:..::x.x.:.x.xx....:.x....x..::::x.------------......x::.x.:x..x...x.-...:x.:.:....:....:x.----.:....:..:......:x...:.:.:.....:.:...::....... 46M12I22M1I21M4I46M 86/135 63.7% 152/94230402 0.0% 17/135 12.6% 70945166 NA +3695 chr4 + 190214555 135671609 135671608 135671746 138 TGTTCCATAGTCTGTCTTTCTCTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTT chr4 + 94230402 63697106 63697105 63697233 63697106 63697105 63697233 128 TACTCCACAGACTTTATTCCTCTCCT---------TTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTT .::....:..x..x.x..:....:..---------...:xx:x..:.:....::....:.:x..::.:.x....xx.....x.:..xxx:....x:..:..:x.xx......::.:.::...-..........:.... 26M9D87M1D15M 83/128 64.8% 128/94230402 0.0% 10/128 7.8% 71974503 NA +3172 chr4 + 190214555 135671620 135671619 135671697 78 CTGTCTTTCTCTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTT chr4 + 94230402 57372022 57372021 57372099 57372022 57372021 57372099 78 CTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ...x....:....:....x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x....:x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 78299598 NA +3451 chr4 + 190214555 135671624 135671623 135671773 150 CTTTCTCTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTT--CCTTTCTTTC---TTTTTCTT---TCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCT chr4 + 94230402 19215409 19215408 19215566 19215409 19215408 19215566 158 CCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:::...::.:.::::..:...:...:..xx..::xx.xx......x..::...x......xxx....x.x:.:..:xx...::....x.......--..x.:....x---:..:....---.:...::.x....x.x.::....x....::x.::.. 96M2I10M3I8M3I36M 93/150 62.0% 158/94230402 0.0% 8/150 5.3% 116456215 73758340 +3256 chr4 + 190214555 135671650 135671649 135671758 109 CTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTT-CTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTT chr4 + 94230402 36195258 36195257 36195367 36195258 36195257 36195367 110 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTT .....:...x.x:...::x....:.xx.xx:x:..........x.:.......:....:...x...-:...xxx..:x:..x...x...:.:..x:::...::...x:.. 66M1I43M 70/109 64.2% 110/94230402 0.0% 1/109 0.9% 99476392 90738163 +4157 chr4 + 190214555 135671663 135671662 135671826 164 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCC---TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTT-----TTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCT--CCTCCATTCTTCACATATCCCTT .....x...:x..x:::.:.......:....x:::x.::x....:x:x.:x.......:x......x.x..:x...-----..x:........:.....:xxxx..:x...:..---..:...x::......:..:...:..--.:...x.:....x:x:x.:.... 76M5D33M3I25M2D23M 101/157 64.3% 160/94230402 0.0% 10/157 6.4% 85495396 NA +4194 chr4 + 190214555 135671675 135671674 135671821 147 TTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCC---TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTG-CTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTC-TCCTCCATTCTT .....x...:x..x-..:.:.......:....x.::x.::x....:x:x.:x......:.x..::..x:x...x..:..x:........:...:.:xxxx..:x...:..---..:...x::......:..:...:.-....:.x..... 14M1D95M3I24M1D12M 95/145 65.5% 148/94230402 0.0% 5/145 3.4% 85495408 NA +8233 chr4 + 190214555 135672720 135672719 135673004 285 TTCATATATATTCAGAAAATTATTTTACTATTGTTTATTTCACACATAATATGAATAATAAATGTTCACTTGACTAAATTTTATATTTGGC---TTGTAATTGCAACGAATTTTGATACATTAACATTTAAATAC-TAATCTCTGACAAATCAATTTCATAGCAATTAATCCCTAAA--CTGCTAATTGACACTTGATATGTGTGTTAAGTGTTATAAACAGCATGGTAGCTTACATGCTAAATGTCAA--------ATGTGTGTTT--AAGTAAAATTTGTTAATAATAAAT-TAATTACA chr4 + 94230402 29128773 29128772 29129073 29128773 29128772 29129073 301 TTAATAAGTATAAAGAAAATATCTTTACATTTTCATATAACGTAGTGAAATTGTGTAAGCAATAATAGCAT-ATTAGATGTCATATTTATTACATTAAATCTGTGAACACTGTTAATACATTAACATTTAAAAAGGTAGCCCATGGCAAGTCAATTTCACAGCAATTAAAACTGAAAAACTGGTAATTGACATTTGATAAGTGTGTTAATTGATATCAAGCTTGCAATAGCTAACATGTTAAATGTCAATTAAATCCATGTGTTTTTACAATTAGAATTTATTAATAAAGAATCTAATTACA ..x...x:...xx.......xx:.....xx..x:x...xx.::.xxx..xx..x:...xx...:x.x:.x.-.:..:..x.:......:x:---..:x.x:..::.xx.x.x..:.................x.x-..::.:x..:...:.........:.........xx.:x...--...x.........:......x.........x..x...x..xxx:::::.....x.....:..........--------......x...--..x..:.....:.......x:...-........ 71M1D19M3I41M1I41M2I70M8I10M2I24M1I8M 200/284 70.4% 301/94230402 0.0% 18/284 6.3% 106543947 83670608 +3425 chr4 + 190214555 135688081 135688080 135688142 62 AATATTGGCCTGA---AATTTCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTGTTGTTGTTGTTG chr4 + 94230402 153451 153450 153515 153451 153450 153515 65 AATGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTTGTTGTTGTCG ...:..x.....:---:....x.:.:...:.:...:...:.........x.............:. 13M3I49M 49/62 79.0% 65/94230402 0.0% 3/62 4.8% 135534630 54679925 +3143 chr4 + 190214555 135688082 135688081 135688143 62 ATATTGGCCTGAAATTTCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTGTTGTTGTTGTTGT chr4 + 94230402 82090588 82090587 82090649 82090588 82090587 82090649 62 ATTTAGGTGTGATTTTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGT ..x.x..:x...xx...:.::.........:....x.....::.:...x.........:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 53597494 NA +3076 chr4 + 190214555 135688097 135688096 135688143 47 TTCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTGTTGTTGTTGTTGT chr4 + 94230402 82090609 82090608 82090655 82090609 82090608 82090655 47 TTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGT .........:..:.x...:.::.:......x......:......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 53597488 NA +3229 chr4 + 190214555 135696156 135696155 135696221 66 GTGGCGCACACAGGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:....::--.....:...........::...:....x.xx.x...x.:........::.:.. 11M2D53M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 59662955 NA +3057 chr4 + 190214555 135696296 135696295 135696367 72 AAAAAAAAAAAAAAAAAAAAAAAAAGGACATGATTCTTAGGTGTTTCTCAGCAAAAGAGAAGAGGAGATTTT chr4 + 94230402 86707557 86707556 86707628 86707557 86707556 86707628 72 AGGAAAAAAAAAAAAAAAAAGAAAAGAGCCTTAATCATGCCTGATTCTCACCAAAGGAATAGGCGAGGCCTT .::.................:.....::.x.x.x..x.:xx..x......x....:..:x..:x...:::.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 48988739 NA +4014 chr4 + 190214555 135702537 135702536 135702653 117 CCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGAAAAAAGAAAGAAAGAAAAAGCAGCTTAATAAGATGCATGTGAAACCTCAAAGCCAATTCAAAGAAATCAGAAAATTAATCTAAC chr4 + 94230402 54113486 54113485 54113597 54113486 54113485 54113597 112 CCAGAAAAAAAAAAAAAGAAAAAATGCATAAAGATAGAAAAAGCAAGCATTAGCAATTCAATGATGTGAATATCATACCT-----CTAAATTAAATAAATCAGCTAATTAAACTTAC ...:.............:......x:x.x:.::.x.:.:....x...x.xx....::.:...:.x:..x..:.x.x....-----.:..x.:...x.......xx......x..x.. 80M5D32M 78/112 69.6% 112/94230402 0.0% 5/112 4.5% 81589051 NA +3124 chr4 + 190214555 135713701 135713700 135713762 62 TTCTTTCCTTCCTTCCTTCTTTCCTTCCTTCCTCCCTCCATCCCTCCCTCCCACTCTCTCTC chr4 + 94230402 84992645 84992644 84992706 84992645 84992644 84992706 62 TCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCC .:.:..::..::......:...:.:.:.........x.:::.::..:........x.x..:. 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% 50721056 NA +3094 chr4 + 190214555 135713783 135713782 135713824 42 CCTCCTTTCCCCTTCCCCTTCCCTTCCTTTTTTTTTTTTTTT chr4 + 94230402 51227415 51227414 51227456 51227415 51227414 51227456 42 CCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTT ....:......:.....:.........:...::......:.. 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 84486368 NA +3539 chr4 + 190214555 135714065 135714064 135714147 83 CATGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCATGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--......:...........::........x.xx.x...x.:.x.......:.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 59680868 NA +7103 chr4 + 190214555 135720433 135720432 135720627 195 AGCGATGGCCTTCATTTGAGGAGCTGTCATCAGCAGTCTTCATTATAGCTGTAATGATAATGTGTAATGTGGTATTTTAATAACCATTGCAATTGGCTATTAAAATGCAGCTTTGCACATCAAAATTGCTATGCTGCTCTTGCAGAATTTCTCAGGAAATACGCCGTCCCTTGACAGTTTTCTGCAGTTTAGTGG chr4 + 94230402 29150475 29150474 29150669 29150475 29150474 29150669 195 AGTGAACATCATCATCTGAAGAGCAGTCACCAGCTGCTTTCTTTGCAACAGTGACGTTACTGTACAATATTATATCTTAATAGCCATCTCAACTGGCTATTAAAATGCTGCACTGTGCATTAAAATCACTACCCCACTGATACACAAATCCTTACCAAAGATACAGTCCCTGAAAATTACCTTTCATCTCAATGG ..:..xx::.x....:...:....x....:....x.::...x..::.:.x..:.:.x..x...::...:.x:...:......:....:x...:...............x..x:..::...:.....::...:x.::..xx.:..x..x.:..:.xx...x.::.x......x:.x.x.x:::.x..x:.:.:... 195M 125/195 64.1% 195/94230402 0.0% 0/195 0.0% 106569958 83644597 +3899 chr4 + 190214555 135720488 135720487 135720603 116 GATAATGTGTAATGTGGTATTTTAATAACCATTGCAATTGGCTATTAAAATGCAGCTTTGCACATCAAAATTGCTATGCTGCTCTTGCAGAATTTCTCAGGAAATACGCCGTCCCT chr4 + 94230402 34704281 34704280 34704396 34704281 34704280 34704396 116 GGTGATTTGTAATGCTGTCTTTTCATAATCATTTCAAATGACTGTTAAGAAAGGGCACTGCACATCTACATCTCTGCCATATTCCTTCAGCAGTACTCAGCAGATATGTTGCTGCT .:.:..x.......:x..x....x....:....x...x..:..:....:.x:x:..x:........x.x..:x..::xx.::..:.x...x.x.x.....x.:...:.::.::x.. 116M 74/116 63.8% 116/94230402 0.0% 0/116 0.0% 101016207 89198348 +3427 chr4 + 190214555 135730561 135730560 135730684 124 GTATATATATATATATATATATATGTGTATATATTTTTAAAAAAGTGTGTATATATATATATGCTTCTTGTATATATATATACACACACACACACACACACACATATACATACACACACGCACA chr4 + 94230402 46140789 46140788 46140906 46140789 46140788 46140906 118 GTACAGTTTTACAGATATGTGTGCATTCAAATGTATTGCAATAAATGT-----TACACTATTATTTTGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...:.xx.x..:.x....:.:.:::.x:.x..:.x..xx..x..:...-----..:.:xxx.::..:x....-................x.x....:.......::.::...:...x..x:... 48M5D19M1D51M 78/118 66.1% 118/94230402 0.0% 6/118 5.1% 89589772 NA +3266 chr4 + 190214555 135809939 135809938 135810004 66 GCACCTATAGTCCCAGCTACTCGGGAGTCTGAGACAAGAGAATCACCTGAACCCGGAACCCGTGAG chr4 + 94230402 76033206 76033205 76033271 76033206 76033205 76033271 66 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG ....x.:....:.........:.::..x.....x.xx.x...x...:.......:...x.:x..:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 59776733 NA +3917 chr4 + 190214555 135813427 135813426 135813595 169 TATTATTGGAAATCCTATATAGAGCAACTAGATAAAGAAAGAAAGAAAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAGAAAGAAAAAAGAAAGGACATCCAAATCGGAAAAGAAAGAA chr4 + 94230402 49044636 49044635 49044810 49044636 49044635 49044810 175 TAATATTGAATTACCTAAA-AGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAA ..x.....:.xxx....x.-...x:..xx...x..::.x.::.::xx..:.:x..xx.......x.::x..x:....:x.-------.::..:.:....:xx..........::..:.x:.:...x................x:...x.:::.xx.xx:.x.x....:..::.:.. 19M1D60M7I89M 104/168 61.9% 175/94230402 0.0% 8/168 4.8% 86768791 NA +3087 chr4 + 190214555 135813472 135813471 135813564 93 AAAGAGAAGGAAA----GAAAG-----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAGAAAGAAAAA chr4 + 94230402 71715024 71715023 71715125 71715024 71715023 71715125 102 AAAGATATGGGAACTTTGAAAGGCTGCAGAATAGCAAAGTTAGGCAGGAAGAGAGAGAGAAGGAAAGTTTAAAACAAACAAAAGCAACAAAAGAAAAAAGAA .....x.x..:..----.....-----.:.:x.:x....xx..:x..:....:...:....:.....xxx:...x...x.....x..x........:..:.. 13M4I5M5I75M 67/93 72.0% 102/94230402 0.0% 9/93 9.7% 64098448 NA +3064 chr4 + 190214555 135883056 135883055 135883112 57 ACAGAACACTTTATTTATATGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTC chr4 + 94230402 53982076 53982075 53982132 53982076 53982075 53982132 57 ACAAAATATTATATTCAGATTAATTCTTTTTTCTTTCTTTCTTTTATTTTTTACTTC ...:..:.:.x....:.x..x...........:...:...:....x......x::.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 81900980 NA +3139 chr4 + 190214555 135885629 135885628 135885688 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGCGCGTGCACTCA----------TGTGTCCAC chr4 + 94230402 79265519 79265518 79265588 79265519 79265518 79265588 70 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCAC .............::........xx...:.:.:.:.:.:..:......x.:----------......... 51M10I9M 47/60 78.3% 70/94230402 0.0% 10/60 16.7% 56620110 NA +7926 chr4 + 190214555 135895536 135895535 135895896 361 CTTAACATTATTCAAGCTTTATTATAGCCCTGGCACTCCTGTTTCTAAGAGAACACATTAATGATTTGCTACTAAGAACAAAAGAACAACAAATCTGTAGACATTAATAGTTGTAGAACAATACTTTAATAGTTCACAATTAATTTTGTCT---TCATTGTA-TATGTCTCTGTGGGAAATATAGAAAGATGCCCTAATACATATTCAGTTCACAACTTTT---------------------------TCTTCCCAGTGTTGTTG-----GTTA--------------------GGTATTTTTTTTCTTAAC-----GATAAAATGAGAAAAGATAGGTTGAGGATAAAAGTAAAGTTATTGTTTAAAACAATAAAATTTTAATGGAATACTGTACAAGCAAAAGGATAAGATCACACATCT chr4 + 94230402 29239963 29239962 29240377 29239963 29239962 29240377 415 CTTAATTTT-TTCAACTCTGATTTCAACTTTAATGTTACTGTCTGAGCATAAACAACTAAATG--TTGCTGAAAGGGAATAAGAAGATCTTAATCTGTAGAAACAGTGAAAGGCAGAAGAATACTTTTGTAACTGAGAATTATTTTTGTTTGTTTGTTTGTAACATGGCTCTGCTGGAAATGTGAGAAAATAGCCTATCTTATCCAGAGTTAATAACTTTTGTTAGATTTTTATTTTTTCTCTTTTCTTTTTCCCTGCTttgttgttgttgttattgttgttgCTTTTCAGGGGGGTTTCTGTTTTTCTGTCTACCTGACAAAATGAGAAAAGATAGCTAGAGGATGGAAGTAAACATATTGTTTAAGACAGCAAAAATGCAATGGGATACAGTAAAAGAACAA----AAGATCACACAGCT .....:x..-.....x::.x...x:.:.::.:::::.x....:.xx:x:x:....xx.x....--.....:xx.:.:.xx..::.:xxx:x..........x.:x:xx.:xx.:....x........x:..::.x.x.....x......:.---.xx.....-:...x.....:x......:.:::..:..:x....x:x:..x:xx....x.:.......---------------------------.:.....x.:x......-----....--------------------...x.:.x....::.:x.-----..:.................x.x......::.......xx..........:...::....x.x:.....:....x...x...x.x..----...........x.. 9M1D53M2D86M3I8M1I58M27I17M5I4M20I18M5I87M4D14M 239/354 67.5% 415/94230402 0.0% 68/354 19.2% 106655573 83558982 +3233 chr4 + 190214555 135925469 135925468 135925547 79 GTGGTCAGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.::.x......:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 5M2D72M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 59892268 NA +28182 chr4 + 190214555 135937714 135937713 135938175 462 TCTATGGGAAGTGTTAATAGTTTGATTTAGTTCTAA-CTTTGATTCAAAGCCTTTATCTGGCCCTGT-GAGCACATGAAAAAGGTCTCCATGCCAAAGTTGTGATTAACTTTATAGATTCAGGGGAATTATGGAAATGCATCATGCAAAA-TGCCTACTTGCCAAAATTATTCCATGACCTTGTGCTTAGGCTGAGTTTTAAATAATTCAGTGATGTATTGAATGAATAAATTTGTATTGCTTGTTACTCTAAACAGTCATGCATTCACTTTTCCTTGCCATTTTTAATAAAGCCTAGTTTTCTAATATTCATGAAATATTGCATTTCAATTAAATTACATAGGTTTTGAAAAAATAGTTTGCCCTAAGCTGTTTAATGTTGACACCAACTGTCATTTACTTTTTC-TTTGGTATAATGCTCAAGGAGTCTTTGAGTACAACTAATGCAAAATACTGTCACTTTTT chr4 + 94230402 29268244 29268243 29268705 29268244 29268243 29268705 462 TCTATGTAAATT--TGGTAGCTTGGTTAGTTCCTAGGTTTTAATTCAGAACCTTTTTCTGGAGCAGCCTAGTGCACGAAGCAGACTTGCATGCCAAAGTCGTGATTAACTTTATAGATGCAGTGGAATTATGGAAATGCTTCGTGCAAAAGTGCGTACT-GCCAAAATTATTCTGTGACCTTGCGCTTAAGCGGAGTTTTAAATAATTCAGTGATGTATTGAATGAATAAATTTGTGCTGCTTGTTACTCTAAACAGTCACGCTTTCAC-TTTCCTTGCCATTTTTAATAAAGCCTCACTTTCTAATATTCATGAAATATTGCATTTCAATTAAATTACATACATACCGAGAAAATAGTTTGCCCTAAGCTGTTTAGTGTTGACACCAACTGTCATTCGCCTTTTCTTTTAGTACAATAACCATGGAGTATTTATGTACAAGCAATACAAAGCACTGTCACAGTTT ......x:..x.--.::...:...:..x:x.:...:-:...:.....:.:.....x.....xx.x.:-x..::..:...:x..:::.x...........:..................x...x................x..:.......-...x....-.............::........:.....:..x...........................................::......................:..x.....-..........................x::...........................................x:.x::..:.........................:....................::.:.....-...:...:...:x:..x.....x...:x......x:...:....::........xx... 12M2D22M1I30M1I82M1I8M1D109M1D136M1I59M 383/458 83.6% 462/94230402 0.0% 8/458 1.7% 106669470 83545085 +3090 chr4 + 190214555 135953334 135953333 135953376 43 TATATATATATATATATATATATATATATATAGAGAGAGAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x.:........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 108947338 81267217 +3207 chr4 + 190214555 135953453 135953452 135953505 53 ATATGTGTGTGTATGTATATATATGTGTGTGTGTGTGTGTGTGTGTGGAGATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ....:.::..::..:::....x..........x...........x....:... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 129095843 61118712 +5549 chr4 + 190214555 135956932 135956931 135957211 280 GCTTTTGCAACTGCTGTTTCAGGGAGAGGTTCATTCTTTCAACTATGGCTTATCCTTGAGAATTATATGGGATACCAATAATGTGTTTAATATTCCATATAGAGAAAAATATAGCTAGAGCTTGGCTAGTACAGCCTGGGGCATTCTCTGTTTTAATAGAAGCTGGAATGCCCATCACCGCAAAACACTGCAAAAGGTGACATTTAACATAGGCAGAAGACTCTCCTGATTGGCATGTAGCCCAAACAAATTGAGAAAAGGTGTCCACACATACACGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ....:.x...x.:.:x...:.:x.xxxx:..:::::x...x.....x.::.:x...xx:.:xxx:.x::.......x:..x.......x.:x::....:.xx:x.:...:x:xx.x..xx:x:.:.....::..x.....x....x........x..xx:x:x...x..:.....x........:..x::xxx:..:..x.x..:x....:x::..xxxx:.....x.:...:xxx..:.....x.:...x...xx.x.x..:..:.:.x.:..::.... 280M 159/280 56.8% 280/94230402 0.0% 0/280 0.0% 116891611 73322944 +3078 chr4 + 190214555 135983348 135983347 135983414 67 GAATTTTCTTTTTCTTTTTTTTCTTTCTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGTT chr4 + 94230402 36195256 36195255 36195322 36195256 36195255 36195322 67 GACTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTT ..x...:...:x.x.....:x....:.xx.xx:x...........x.....:.......::...... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 99788092 90426463 +3024 chr4 + 190214555 135983365 135983364 135983417 53 TTTTTCTTTCTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGTTGAG chr4 + 94230402 72001435 72001434 72001487 72001435 72001434 72001487 53 TTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAG ..:.x..::..x...........:...:...........:.::..:.:.x... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 63981930 NA +3053 chr4 + 190214555 135987520 135987519 135987625 106 TAGCCGAGGAATCAAACTG-------ATTTTCTCTCTCTTTTTTCTTCTTTCTTTTTTATTTTTTTTATTTTTATTTTATGTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGT chr4 + 94230402 89452712 89452711 89452824 89452712 89452711 89452824 113 TGGACAGAGAATTGAGCTGGTCGAGGATTACCCTTCTTGTGTTTTGTTTTGCTTTTTTATTTGTTTTGTCGTTGTTATCTGTTTGTTTTTAGTTAGGCTTCAGCTAGCTCAGT .:.x.:::....::.:...-------...x:.::...:x.x...:x.:..x...........x....:.:x..:..x.x.....x.....xx.x..:..xx:x..x....x.. 19M7I87M 69/106 65.1% 113/94230402 0.0% 7/106 6.6% 46534808 NA +3838 chr4 + 190214555 135992955 135992954 135993296 342 TCTTCCACTTTTCATA--AGACCATTTATAAATTCT--------TATACTACATTTCTCATCCCATTGT--GCCTGCAATCAGCTCTTTAAGAAGTTATAATTTTTCCTTACTTCTTCTATGTTTTACTTAT--TTCTTTTCCTGTTTTATATTTCAAATGTGGTT-----AATGGAACATTTTTCTTT------TAGGCAATCTTAATATCTATCATAACCCTTCTTTTCTTTTCTTTTCTTTCTTTCCTTCTTTCGTTCCTTCCTTCTTTCTTTC-CTTCTTTTTCTTTCTTTTTTCTTTTTCTCTTTCTTTCTTTCTTTTTTCTTTCTCTCA-------TTCTTTCTTTCCTTCTCTCTTTCTTTCTTATTT chr4 + 94230402 50176051 50176050 50176403 50176051 50176050 50176403 353 TTTCCCATTCCTTATGCTAGACCATTTCAAGCTGCTGTGTCCTTCAGACCTCTCTGCACTTCCCATTGTTGGTTTTCAAACA-----TTAAGGAGCTCGTACTTTTATGTAGGTGATTCATTCTTTCCCTATCATTCCTCTCCTG----ACATTTGAAATTGGATTTTGCAGAGGTACCATTTGCCTCTAACTGATAAGAAAGGTTTGTTTCTGGCAAGA------------TGGATTTTCTGTCTC-ACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCT .:.:...:.::.:..:--.........xx.:x.x..--------:.x..:x.x:.x.x.x.........--.::.x...x..-----.....:..:.xxx.:....x:x..xx.xx.::..x:...x.:...--...:.:.....----.:....x....xx.:..-----:.x.x.x.....x:..:.------..:.x..xx..x:.x...:x..x:.------------.xxx......x...:-x..x..:..x..:.......:x.:.x::.-...:.x:x.:x......:.x:.:...x.x..:x...:.x....:.........::x.-------:..:::x...:...x....:......::.x.:. 16M2I18M8I25M2I11M5D45M2I11M4D17M5I18M6I25M12D15M1D29M1I57M7I33M 203/320 63.4% 353/94230402 0.0% 55/320 17.2% 85816904 NA +3035 chr4 + 190214555 135993185 135993184 135993249 65 TCGTTCCTTCCTTCTTTCTTTCCTTCTTTTTCTTTCTTTTTTCTTTTTCTCTTTCTTTCTTTCTT chr4 + 94230402 13063263 13063262 13063327 13063263 13063262 13063327 65 TCGGTCTGCTCTGCTCCCTGTTCCTCTTTCTTTTTTTTTTTTCTTTTCCTGTTCCTCTCCTCTTT ...x..:x::..x..::..x.:.:.....:.:...:...........:..x..:..:..:.::.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 122929922 67284633 +3067 chr4 + 190214555 135993208 135993207 135993297 90 TTCTTTTTCTTTCTTTTTTCTTTTTCTCTTTCTTTCTTTCTTTTTTCTTTCTCTCATTCTTTCTTTCCTTCTCTCTTTCTTTCTTATTTT chr4 + 94230402 27089049 27089048 27089138 27089049 27089048 27089138 90 TTCATTCTCCATCTTTTTTATTCCTCTGTTCTGCTCTCTTTTTTCTTTACTGCTGGTACTTTTTTCCCCAGTCCTTTTTCTTCTTAGCTT ...x..:..:x........x..::...x..::x:...:.:....:.:.x::x..x:.x....:..:..:xx..::...::......x:.. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% 108904159 81310396 +3191 chr4 + 190214555 135993218 135993217 135993302 85 TTCTTTTTTCTTTTTCTCTTTCTTTCTTTCTTTTTTCTTTCTCTCATTCTTTCTTTCCTTCT----CTCTTTCTTTCTTATTTTAGGTA chr4 + 94230402 63350687 63350686 63350775 63350687 63350686 63350775 89 TCCTTGTTTCTTTTTATCTTTCTCTCCTTATGTTTTCTCATTTTCATTCTTCTTATCATCCTAGGATTCTATGTCTCACTTTCTAGACA .:...x.........x.......:..:..x.x......:x:.:........::.x..x.:..----:...x.x.:..x:x..:...::. 62M4I23M 59/85 69.4% 89/94230402 0.0% 4/85 4.7% 72642531 NA +3033 chr4 + 190214555 135993228 135993227 135993297 70 TTTTTCTCTTTCTTTCTTTCTTTTTTCTTTCTCTCATTCTTTCTTTCCTTCTCTCTTTCTTTCTTATTTT chr4 + 94230402 28615947 28615946 28616016 28615947 28615946 28616016 70 TCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTT .:........::...::.:....x:.::x::.x.......x.x...:..x......::....:.:x.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 107377281 82837274 +3000 chr4 + 190214555 135993376 135993375 135993426 51 TTTCTTTTCTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTTTC chr4 + 94230402 86518997 86518996 86519047 86518997 86518996 86519047 51 TTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTC ......::...:.......x:.::xx..:.......:...:.......... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 49474379 NA +10061 chr4 + 190214555 135995932 135995931 135996178 247 GGGAAAGCGCGAATGCAGTCCCCCACTACCACAAATTATGCAGTTGAGTTTCCCACATTTGGGG--AAATCGCAGGGGTCAGCACATCTGGAGTGCAATGGATAAGCCTCGTCCTGGGAAAACCACCTTTGTGATCATGGTATCTCCCCTGCCAGGTAAGTATGAGTTTTCTTTTTTAATCAAGAGTTAAGATAATTGTAGATTCATACACAGATCCAAAAAATGGTGCTGAGATAATCAGCTAGTCAT chr4 + 94230402 64119698 64119697 64119924 64119698 64119697 64119924 227 GGGACAGCATGAACACAGTACCCCACTACCACAAATTACACAGC-AAGTTTCCCTCATTTGAGAGAAAATTGCAGTGATCAGCACACCTGGAGTGTAGGAGATGAGCCTCCTGCTGTGAAAACCACCTGCCTAATCACGGTGTCTCCCCTGCCAG----GCATTTTTTTTTTTTTTTAAACTA-------------TGTAGGTATATATAAATATACAACATATGATGC----ATAAGCAGTTGCTCAT ....x...::...::....x..................::...:-:........x......:.:--....:....x.:........:........:.:x:...:......x.x...x...........x:x.:....:...:.............----.:..xxx....:........x.x.-------------.....:.x:...:.x.x..x...x.x...:...----....x...:.:x.... 44M1D19M2I89M4D24M13D33M4D16M 173/225 76.9% 227/94230402 0.0% 24/225 10.7% 71876234 NA +6553 chr4 + 190214555 135995947 135995946 135996111 165 CAGTCCCCCACTACCACAAATTATGCAGTTGAGTTTCCCACATTTGGGGAAATCGCAGGGGTCAGCACATCTGGAGTGCAATGGATAAGCCTCGTCCTGGGAAAACCACCTTTGTGATCATGGTATCTCCCCTGCCAGGTAAGTATGAGTTTTCTTTTTTAATCA chr4 + 94230402 81180113 81180112 81180245 81180113 81180112 81180245 133 CAGTTCCCCACTACCACA---------GTCAAATCTCTTGCATTTGGGGAAATCACAGGAGTAAACATACCTAGAGTGCAGGGGATGAGCCTCAC---------------------ATCATGGTGTCTCCCCTGCCAAGCAAGTATGA--TGTCTGACTTGATCA ....:.............---------..::.:.:..:::..............:....:..x.:..:.:..:.......:x....:......::---------------------........:............:.:........--.x...xx:..:.... 18M9D68M21D32M2D15M 105/133 78.9% 133/94230402 0.0% 32/133 24.1% 54815834 NA +3028 chr4 + 190214555 136019981 136019980 136020042 62 AAAGAAACGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAGAAAGAAAGAAAAAAACTGC chr4 + 94230402 56724541 56724540 56724602 56724541 56724540 56724602 62 AATGAAATGGAACAGACAAAAACAGAAAAAGAAGGAAAGAGGGAAAAAAATAAAATACTTGC ..x....:.:..x.:.x...:.x.::.......:.......:....:...x....x.x:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 79295440 NA +3319 chr4 + 190214555 136066581 136066580 136066671 91 AATTTTAATAATATTGATTCTTCTGTTTCTTAAGAATGGTATCTTTTTTCTTTTTTTTGGATCATCTATTATTTCTTTTAGCAAAGTATTG chr4 + 94230402 45455185 45455184 45455274 45455185 45455184 45455274 90 AATGCTAATGATGCTAATATTTCTGTTTTTTCAGTGGGGTTTTTTTTTTTTTTTTTCAGGAGCATCTCTT-TCCATCTTTGCAAATAACTG ...x:....:..::.:..x:........:..x..x:x...x.:......:......:x...x.....x..-.::x.:..x.....xx.:.. 70M1D20M 62/90 68.9% 90/94230402 0.0% 1/90 1.1% 90611396 NA +11891 chr4 + 190214555 136101953 136101952 136102415 463 ATAAATCTCAAGACATTGAAATTAAACCTTACCCCTCAGCTTTTTTGCATACTAATATGTAACTTTGAGCAAAATGGAAATGCTCTTCTTTCTGTACAGGCAACGTAGCCCTCTTTTAAATGTAAGTTCTAACAGTTACTTTTATTTTTTTCTTTCATTCTGAACAGCAGGATTGGCTA-TAGCTTCTGAGTCTTTGAATTTTGTCTC----------------------------AATTATATCTCTAACATTGCTCCAAGTC-------TGTATCATCAATTACGGTA---AAACGTCTTTGAAAATAAGCTCACTGATTGAGCCAAATTCAAAGAGACATT-CAGTAACACATTCACATTTGTTTAATAACCTCATCCTCATCTCTAATCCATGAGTTTAATTAAACTCTGTGCTTT-TATTTCCAGGCATACATTTTCAATGTTATCTTTGTGAATTCAAACCAAGG---CTCTGTCCCAGTCAAATGAAACCTAGAAGAATT chr4 + 94230402 29339413 29339412 29339897 29339413 29339412 29339897 485 ATAAATCCTTATGCACTCAGA--AGACATT---CCTCAGCTTCTTTGCATGTTAATATAAAGCCTTGAGAAGAATGGAAATGTGTTCTTCTCAGTACTGTCACAGTTGCATATATTTAATTTTAAG--CAAGTAG--------ACTTTCTC------TTCTGAACTATTATATAGGGTAATGGCTGCTAGGTCTTCTCACATTGtttttttttgtttttttttttttctttCCATAAACAGCTTCTCTAACAGTATTGCAATTCCAAACCTTTTATTACCAGTTGCAGTACGAAAATCTCTCAGAGAACAAATTCATGGACTGAGCCAAATTCAAGGAGGCATTTCAGTAATACATTCAAATTTGTTTAATACCTTCAGCCCTATTTCTAATCCTTAAGTTTAATTAAAGTCACTGCTTTCCAGTTACAACCACATACTCATAATTTTTTTCTTCTGGAATCAAAATAATGAGCCTGAATCTTAGTC-AGTGAGTCTTTGGAGAATT .......::x.x:..:.x.:.--.:..x..---.........:.......::......:x.:.:.....x.:..........:x:.::.:..x....x.x..xx..x..x:x:x.....x.x....--.x.::..--------.:...:.:------........x::x:x..x..x..-.:...x..::.....:xx.:x....:.:----------------------------..:x::x.........x.::.x...x..-------.x...:.:..:..:.:...---...:x...:x..:..:..::...:x..:..............:...:....-......:.......x............x.:...x..::..:........x.:............x..xx......-:.x..x..:x..:.:.:.:x:...x..x.::..x..:.x.....x:..x.---..xx:..::....-.:...:x.:.x.:...... 21M2D7M3D93M2D7M8D8M6D22M1I28M28I28M7I19M3I51M1I75M1I50M3I13M1D19M 304/441 68.9% 485/94230402 0.0% 66/441 15.0% 106762540 83452015 +10518 chr4 + 190214555 136108900 136108899 136109226 327 TTTTCTTCTTTT-------ACTTTATTT-TTTAAATTATGCAAAGTAAGTATGTGACTAAAACCCAGAGCAAAACTCTTCTTAAGTTATTGTTACAAGATAAAGATAGA-CTAAGTGGGCATGTAGGAAAAGTTGAGTGCACTTTAAGAGTTAGTCATTAATTTAAACATATTA---------ATTTTATCTGCAAGAAGAAATGCTAATGCATTGGTGTACAAAAT--GCTATACATAATAAAAAGCTAACAACCTTCAGGGTATCCATTCACCATAAAAGTAATTTCACACCTAGTCTATTATGTAATGTGCTATGAAAATAGCTCTTTGCTTCAAGATATTATT chr4 + 94230402 29346889 29346888 29347193 29346889 29346888 29347193 305 TTTTCATCTTTTCTTGACAACTTTATTTATTTAAACAAAGAAAATTATATAAGCTTCTAAA---------------------------TTATTACAGAGTGAAAAAAAATCTGAGGAGACATTT-------TCTCTGTATACTTTAA-------TCATTCATTGAAAAATATCACTGAAGTACATATTATTTTCTATTAAAAACACTAATGCAGATGCGTAAGAAAGAAGCTGTATATAATGAAAGGCTAACAACCTTCAGGATATCAATTTACCATAAAACTAATTTCACACCTAGTCTATTATGTAATGTGCTATGAAAATA-TTCTTTGCTTCAAGGTATCTTT .....x......-------.........-......:x.x.x...x..x:..x.:xx.....---------------------------..:.....:::.:..:.x.:.-..:..x:.:...x.-------x:.xx..::.......-------.....x...x...x....:.---------..x....:.x.x.xx.:...::........xxx.:...x:...x--...:..:.....:...:................:....x...:.........x..........................................-:.............:...:x.. 12M7I9M1I32M27D21M1I14M7D16M7D20M9I44M2I95M1D22M 222/285 77.9% 305/94230402 0.0% 62/285 21.8% 106762011 83452544 +3183 chr4 + 190214555 136118103 136118102 136118180 78 AAAATATTGGAAATATTTATATAATATTTTTAAGTCTGTAAATTGTTTGGGAGTGAAAGTAGCCAAACTAAATATTTT chr4 + 94230402 28700879 28700878 28700956 28700879 28700878 28700956 78 AAAATAGTGAAAATGTTTATGAAGTATTTTCATGGAAGTACAATGTCAGTAAGAAAAAATATTCAAATTAAACATTTT ......x..:....:.....:x.:......:.x.xxx...x.x...:x.x:..x:...:..x:....:....:..... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 107417224 82797331 +6279 chr4 + 190214555 136145626 136145625 136145876 251 AAAAGTGAAATGAACATGGCAGAATGCCAGAACTGTCAGAACACTGAAGAGAGCAGACAAATGATATCAAATAATAGTGAATAGTAAATTAAGAAGAAAGAAAGGTTAT-CATTTTGCAATAAAGATGGTCTATGAATTTGAAAGCTTATTTTCAATAAAATAT----------TACAATAACCAGCCATTCATAACCTGAAAGAAATACAAGATATTGCAAAACAATTTATATTCA-----AAAGCAAAAGTTTTA-ACAAGACTTG chr4 + 94230402 29374953 29374952 29375198 29374953 29374952 29375198 246 AAAAGCATGAAGAACATGGCAGAATGCCAGGAATGTCAGAGCACTAGAAATAACATGCCAACAATGTCAAAGAAGGATGAATAATAATGGAAGAAAATAGAAAGGTCATACACCTTGTCATAAGAATAAGCAAAGAATTTTAA----TATTTTATATGAAGGGTATCTGGAATATACAATAAA-----------AATCAAATTGAAATGGAAG-------AGAACAATTATAGTTCACTGGGATGGCTAAAATTTCATATAAAACTTG .....::x:.x...................:.x.......:....::.:.x.:..x:.x..::..:.....x..x::......:...xxx.....:.x........:..-..::...:x....::..::x.x.x......x..----......xx..:..:x:.----------........x-----------..:.x:.xx.....:x...-------.:.......xxx:....-----.x:..x...:...:.-.:..:..... 109M1I33M4D17M10I9M11D19M7D17M5I15M1I10M 161/229 70.3% 246/94230402 0.0% 39/229 17.0% 106770673 83443882 +3035 chr4 + 190214555 136153708 136153707 136153772 65 TGCCAATTGGTAAAAATAATTATATATATATATATATATATATATATATATATATGGTTACAAAT chr4 + 94230402 25262922 25262921 25262986 25262922 25262921 25262986 65 TGCCTTTGGAAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATAGTCAGAAAT ....xx.x.:x....:...x.....:.....x..:.:.....:x..:.:......:..:.x.... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 110890786 79323769 +3243 chr4 + 190214555 136153719 136153718 136153832 114 AAAAATAATTATATATATATATATATATATATATATATATATATGGTTACAAATCACTGTCTTCTTAAGTTTACTAAACAGAAATTCTCAGATAATTAATGGTCTACCAGTAAT chr4 + 94230402 22373499 22373498 22373610 22373499 22373498 22373610 112 AAATGTATTTTCATACATATATAAACATGCAAATGTATACATGTCATTATAGGTCACTAACTTTTGAAGTTTATTTGAAAATGGCTC-CAGA-AATTATTGCTATAGATGTAAT ...x:..x..x:...:.......x.:..::.x..:....:..:.x:...:.::.....:x...:.x.......:.x:.x.:x:::..-....-.....x..x.x..xxx..... 87M1D4M1D21M 74/112 66.1% 112/94230402 0.0% 2/112 1.8% 113780220 76434335 +3020 chr4 + 190214555 136181008 136181007 136181073 66 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAATAAAACAGTGTATGAGGGGAATGCCA chr4 + 94230402 27719993 27719992 27720055 27719993 27719992 27720055 63 CTTTAAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAG---ATTGAGGGATCACCA ..:x..:..:....:.::.....:..........:..........x..---..x::....x::... 48M3D15M 47/63 74.6% 63/94230402 0.0% 3/63 4.8% 108461015 81753540 +3289 chr4 + 190214555 136181590 136181589 136181679 90 TTTATCAGCAGAAA---GATGGAAGCCAGAGGACAGTAGGAAAATACATTTGAAATAATAAAAAAAAAAAACGCCAGGAATACAAATCCAGCA chr4 + 94230402 47104093 47104092 47104185 47104093 47104092 47104185 93 TTTCTTGGTAGAAAATAGCTGCAAGTCAGCAGTGAACAGAAAGTTGCATGTGGAAAAAAAGAAAAAAAAAAAGCCAACAACAAAAATCCAACA ...x.::.:.....---.x..x...:...x:.xx.::..:..:x.:...x..:..x..x.:..........x....:x..:.x.......:.. 14M3I76M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% 89077497 NA +3120 chr4 + 190214555 136182758 136182757 136182815 58 AGAGTTACATTTTATAATATTAAATTGTCATTCCATCAGAAAAATATAACAATTATAA chr4 + 94230402 41983558 41983557 41983615 41983558 41983557 41983615 58 AAAATAATATTTTATACTAATAAACTGAAATCCCACCATAAAAAAATAACAATTATAA .:.:.x.:........x..x....:..xx..:...:..x.....x............. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 94199200 NA +3052 chr4 + 190214555 136197804 136197803 136197872 69 TGTAGAAAGTATTGTGTTTGTGTGTGTGTATATATATACACACACAAACATACATATATAAGTGTGTTT chr4 + 94230402 34521998 34521997 34522066 34521998 34521997 34522066 69 TGAAGTAGATTCTTTGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTT ..x..x.::.x:.x...x.......:...:............x.x..x:xx.::......::....... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 101675806 88538749 +3175 chr4 + 190214555 136216644 136216643 136216718 75 ATATATATGATATATTATATATATTTTTTATTTATATATATATGTGTATATGTGTGTGTGTATATATATATATAT chr4 + 94230402 27702269 27702268 27702343 27702269 27702268 27702343 75 ATGTAAATGATTTCTTAAGACTGATTTCTAGGAATATACATATATTCCCAAGTGTGTGTGTATATATATATATAT ..:..x.....x.x...x:xx.:x...:..xxx.....:....:.x:x:.x........................ 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 108514375 81700180 +16179 chr4 + 190214555 136230487 136230486 136231117 631 ATATTTCTATTTTATATATTCACCTAGCAGACTTTTCCTCCTCTTAATGGGCAAT--ATAATATGTTAAAGATGAATCGTTCATAGAATAAATTAATCATTTATCAGAGAGTCACACATGACTCTTTTTAAGTCTTCACAAGAA-------AAATAAATATCTCAAA-AATCAAAAGTA--GGAAACATAG-----TACACACTTTGTTGCTATTTGA--TAATCAAAAAATAAT----------------CATTTTATTATAT-TTAATATAGTTATTGAGAAGCAACAAAGGGGCATTTGCATTTACGCAA---------AGTGCTGCTTAGAATTTCCTTTTTATTGTTATCAAAGATGCTGGTCAATACTTTATAGCTTTTCTGAGCTCATGCATTCTGATCAAACTTTAGAATATAAAAGATTAAACTTCTCAGCTAATTACATGCCTGGAGGCACATTAACAATGCAAGTGTCAATGCTCTGTTAAAAATTCATTTTGCATTTTTAACACAGTCCTGATAGCAAAACTTTGAAGGCAACAAAGTGGAAAGAGTTATATTCTTATTTTAA-------------AAGGTAGCCTAGAAACCTTGAAAAATTTGAACTTTATTATTTTATA--------TTATGGGAAATTT--CAGAGGTACTATGGAATCAAAGTGAATTTTTTCATGCTAAAA chr4 + 94230402 29418754 29418753 29419421 29418754 29418753 29419421 668 ATAGCTTCATCTTACCAGTCAGCCTCCCAGACATGTTTTG---TTAATGAATAATTAATTTTTTTTTAGCACGGATTCAGCTATAGAATAAATCATTTATTTATCTGGCTGCTACAGAAGGCAGTGTTTAAGTTTTTTCATGAATGTTGGAAAAAGAACATGATAAGCAAATAAAGGTAAAGGAAGAATAAAAAAATAAAAAGATTCCTGTGATTTGGATTGATCTATCAATAATAACAGTAACAACTGAACATGCTATTATATACTGAACTAATGAT---------------GTGCATTCAAGTTTATGGAAGTGTCTTGAAGTGGTATTTACAACTTTGTTTT-------ATCAAAGATGATGGTCAATACTTTCTAGATTCCCTGAGCTTATTTATTCTGATCAAAGTATGGAATATAAAAGATTAAACTCTTCTACTAATTACATGCCTGAAGGCACATCAACAATGCAAGTGTCAAAGCTCTGCTAAAAACTCATTTTGCATTTTTAATAAAA-ACTGATAGCAAGGTTTTGAATGCATCTAACTGGAAAAAAGTA-ATTTTTGTTTCCATAGCTTCTTTATGAGGGAAGTGTAGAAACCTTACAAGACTTTAGCTAATCTGTGCTCTGAAAACGGTCTACTAGAAATTTTCCAGTCATACAAT----TCATGGTGAACTTCTACATAGTGGAA ...x:.::..:...:xx:.:x:...xx.....x.x.::.x---......:::...--..xx.x.x...:x:xx..x..:x::...........:.x.:.......x.:xx.::...x.x.:.xx.x.......:..:x..x...-------...x:..:..xx:..:-..x:...:...--....:x...:-----..x.x.xx..x:..:x.....:--.:...x.xx......----------------...x:........-:.:.xx..:.x..---------------.x.....::x:....:.x..---------....x.::...x..:..:x....-------..........x.............x...x..::.......:..x:............x.x.:...................::..x:...............:........:.................x......:......:.................:.x.:-x..........:::......x...x.x..x......:.:x..-...:..:...:x.-------------.:..x..:x..........:x..:.:..x.:..xxx:.:.x:.x.:--------:..:x:.......--...xx:...x..----...x:.....:..:.x...:x.::.. 40M3D12M2I87M7I16M1I11M2I10M5I22M2I15M16I13M1I13M15D20M9I23M7D166M1D42M1D13M13I46M8I13M2I12M4D26M 423/600 70.5% 668/94230402 0.0% 99/600 16.5% 106811733 83402822 +13345 chr4 + 190214555 136246958 136246957 136247342 385 GCCAGCAATGAAGAGCACCCTTGACTCCTGCTAACTTCCTTTCAGCCATGGTTGGCTCATTATATTGCTTTCGTGCATAGCTGTTGGCAGACGTAGACATAACATTTTAACATGCATTGAGCCTCCTTCAAGCATTTTAATTGGTTTAAAACTACTGGTAGTATCTTTT----ACTGTATTAATTTATTGCTTCAGTTTCAGTCAACTGAAACCTTTGCCAGATGGTAATGCAGCCACTGCATACATAATAGGAGATTGGAGGTATTTATATGATGCAAATG-CCTCTTTTTGATTAAGTATTCATGAA------------------------------------CTTTCTCTTAATGATTATATTGAAAAAGTACTACAAAGATTGAGATTCACACCTCATGGAA--------ATTAATAATCTAATTTTGCA chr4 + 94230402 29429866 29429865 29430291 29429866 29429865 29430291 426 GCTCACACTAAGTAATACCCTTGAAGACTGC-AATCTTTGCTCATCCACACTCAGCTCATTACAGTTCTTTGGTTCTGTGCAGTGGGATCATG---ACATGACATTTTAAAATGCGTACAGTCTGCTTCAAGCATTTTAATTGGTTTAAAACTGTTGGTAGCTTTTTTCTTAAACTGTATTAATTTATTGCTTCAGCGTAAGTCAGCTGAAACCTTTGCCAGATAGAAATACAGGCCCTGAATACTGATGAAGAAAAAGAAAATATTTATATGATGCAAGTGTTCACTCATTCATTAAGTATTCATGAATTGGTTTTTTGGTTCTTCTTTTTTTTTTCCCATCTTCTTTCTTTCA---GCTGCAATGCAAAAGGAGC-CCAAGGTTGAGATTTATATATCATGAAATCACAATTTTTAATAAAATAACTCTGTA ..:x:..x.:.:x.::........xxx....-..::.::x:...x...::x.::........:.x.x....x..x.xxx..x..x..xxx.:.---....:.........x....:.xx..:..x............................::......:x.:...:----.......................:x.x.....:..................:.x...:...x.x...x....xx.xx.:..:.xx.:.::................:..-:.x..:x..x................------------------------------------......:.:.---::.::.x..x.....x.x:-.x...:........:.:.:x.....:..--------x.......xx...:.:..:. 31M1D61M3D73M4I109M1I26M36I10M3D19M1D28M8I20M 275/377 72.9% 426/94230402 0.0% 57/377 15.1% 106817092 83397463 +3129 chr4 + 190214555 136264393 136264392 136264457 65 GCAAAGACACAAGGAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATATATAT chr4 + 94230402 51472488 51472487 51472548 51472488 51472487 51472548 61 GCAAATACACAAAGGAAAAAAG----TAAATATACATATATAAACACATATATACCTACACATAT .....x......:.:......:----x.......:.......x.:.:.......:x..:.:.... 22M4D39M 48/61 78.7% 61/94230402 0.0% 4/61 6.6% 84791905 NA +3368 chr4 + 190214555 136264394 136264393 136264454 61 CAAAGACACAAGGAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATATA chr4 + 94230402 1494995 1494994 1495055 1494995 1494994 1495055 61 CAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..::..x...:::.......x.:...............:.:..:...:.....x:...::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 134769399 55445156 +3041 chr4 + 190214555 136264406 136264405 136264456 51 GAAAAAAAAAAAAAAAATATATATATATATATATATATATATGTATATATA chr4 + 94230402 1495005 1495004 1495055 1495005 1495004 1495055 51 GAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..........x.:....x..........:.:..:...:....:x....::. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 134769401 55445154 +3228 chr4 + 190214555 136264408 136264407 136264477 70 AAAAAAAAAAAAAAATATATATATATATATATATATATATGTATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548420 85548419 85548490 85548420 85548419 85548490 71 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .............:.xx.....:...:.:.:.::...:..:.......x.....-.x.:..:x....x:.. 54M1I16M 52/70 74.3% 71/94230402 0.0% 1/70 1.4% 50715988 NA +3046 chr4 + 190214555 136267876 136267875 136267948 73 AAACCTTTACAAATTCTTTCTTCTCCTCTTTCTTTTCCCCTCTCTCTTCTTCTCTCTTTTTCTTCTCCCTTCT chr4 + 94230402 64561988 64561987 64562060 64561988 64561987 64562060 73 AAACCTCTTAAAACATTTCCATCTCCCCTTTTTTTCCCCCTTCCCCTCTGTCCATCCTTTTCATTACTCTTTT ......:.xx...:x:..:.x.....:....:...:.....::.:..::x..:x..:.....x.:x.:...:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 71705888 NA +3123 chr4 + 190214555 136300466 136300465 136300552 87 TGGGGATGATACCTGCTTTTTCTTTTTCAATGTGTTATTCTAGCTCAATTTCCTTATATTCTTTTCTTTTTCTCTTT-TATTTTCATA chr4 + 94230402 86978584 86978583 86978671 86978584 86978583 86978671 88 TGGGCAGAATGCCTGCAATTGCTTTTTCAAAGTGTTCTGAGAATTCAGTTTCCTCAGATTAACTACTCTTGCTCTTTCTCATTTCATA ....x.x:..:.....xx..x.........x.....x.xxx.::...:......:.x...xx:.x..:..x......-.xx....... 77M1I10M 62/87 71.3% 88/94230402 0.0% 1/87 1.1% 49321882 NA +3032 chr4 + 190214555 136313049 136313048 136313119 71 ATGCATATATACACATATATACACATATACACATATACACATATATACATATATATACATATATACACGTA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .::..:....x.....::.x......::.:...x.x.:.::.....x::.:.:.:..:..::..:...... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 113712851 76501704 +24967 chr4 + 190214555 136318099 136318098 136318558 460 TAAAAGAAACAGAGATATGTTTGGAGAGTACAGACAAAATATTGAAAAGTGTTTGTCT-GCTTACTCCTGTAAAGA------------------TAAGTTCTTC--CAAAACCTTCTGTCATGTAATCAGATTCTCTGGTCATCACAGACAAACTCAGTCAAATCAGAGTACAGATGGTCGTTTATTACAAAACAACACAGGAGGCTTAGAATAGATGATACAGTTGGTCATTTTTGCACATAAAGTCTCTGATTAAGTATGAAAAATGTGAACATTTGTTTATCTTGGAAAAACTGCTATTACTTGTCAGCCATGACCAATTAGTTATTTCTAAACTGTTATCCATATAATTAAGAAAAACAGCCATCTGTAAAGTCAGAAGTTTGTGTCTCTTTT---------------------------------CTCATCCACATGTAAATGTAATTTCTGTAATCTGATTTACTTAAAAGAAAATTAACAGGCAGAATACAAGACAGATGACAGAAA chr4 + 94230402 29473036 29473035 29473548 29473036 29473035 29473548 513 TGAAAGAAAAATAAACTTGTTTTGGGGACATCTCTAAATTAATGAAGTGAGCTTTTGTAGTTCACTtaaataaataaataaataaataaataTCTAGTTTCTTCTTCAAAACGATCTGCCATGTAATCAGATTCTGTGGTCATCACATGCAGACTCCATAAAATCAAAGTACAGATGGTGGTTTATTATAAAATAACATAGGAGGCTTAGAATAGATGATACATTTGGTCATTTTTGCACATAAACTCCCTGATTAAGTATGAAAAATGTGAACATTTGTTTATCTTGGAAAAACTGCTATTACTTGTCAAGCATGACCAATTATGTATTTCTAAACTGTTATCCATATAATTAAGAAAAACAGCCATCTGTAAAGTCAGAAGTTTGCATCTGTTTTTTGTGGATTTTGTTTGAGAATCTCCCCCCCACCCCAATCCATATATAAATACGATTTCTCTAATCTGATTAATTCATAA-AACAGTAACAGaagaaaaaaaaaaaaaaaaaaaaaaa .:.......x.x.:.:x.....x.:.:::.:xxx:...x..x....:x.x.:..x.x.-.:.:...:xx:....x.------------------..:x......--......xx....:................x...........x:..:....x:.x......:............x........:....:....:........................x.....................x..:.............................................................:x............xx.............................................................::...x....---------------------------------.:x.....:..:.....:::......x..........x.:.:.x..-..x.x......:x::..x.x..:.x.:.x:.x.:... 58M1I17M18I10M2I291M33I46M1D37M 374/459 81.5% 513/94230402 0.0% 55/459 12.0% 106845063 83369492 +3184 chr4 + 190214555 136324928 136324927 136324966 39 TTTTTAAAAAAACAAAAAACAAACAAAAAAAAAACAACC chr4 + 94230402 15869710 15869709 15869748 15869710 15869709 15869748 39 TTTTAAAAAAAACAACAAACAAACAAAAAAAAAACAACC ....x..........x....................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 120455218 69759337 +11183 chr4 + 190214555 136347342 136347341 136347664 323 GTTATAGTTTACTACATATTAAAAGCAGTTCCTTAAACAATTTAGAGTAATGGCTTAGGGTTCTGTTGGTAGCTATTAGTATTACTGACTGTGAAGCAGCTGCTTGATTTAATTGGCAAACACTTGTTCTTTTCATTTACAAGCAAAATTAGCACCTACACT-CTTGCCAATAAATTAGACATTGCACCTACCTTGAAATGAGCACTACTAACTACTGATTGTAATTACAGCAGATAACCTATCACACTTGCCTAAGGCCTCTGGTTCTGGTGCTTATACTCACCTTAGAAAATATAAGGAACTGATGTATCCTTGATATAACA chr4 + 94230402 29475715 29475714 29476013 29475715 29475714 29476013 299 GTTAGCACTTACTATGTATTAAAAGCAGTTCATTAAACAATCCAGAGTAATGGCTTCAAGTTTAGTTGGTAGCTATTAGCAATAGTGTCTGTGAAACAGCTGTTAGATTTAATTAGCAAATGCTAGTTCCTTTCCTTTATAGGCAGAATTGGAACCT-CACTGCTTGCCAACAAGCTAAAGATCGTACCAATTTTAAACCGGATGCTATTTAACCTGCCTTATTATTAAGGAAGAAAA---ATCCCACCT--CAAAGACTGCTTA-------GCATATACTC------------ATAAAAAACTGCTGATACTTTCAGCTAACA ....xx::......::...............x.........::.............x::...:x...............:.x..x..x.......:......:.x.........:.....::..x....:....x....:.:...:....:.x....-....-........:..::..:.x..:.:...x.::..:..x:.::::...:.x.x:x:xxx..:.x....x:.x...x..---...x...:.--.x...:.:x..x:-------..x.......------------....::.....x..xxx.:..x.xx..... 157M1D4M1I75M3D9M2D13M7D10M12D30M 215/298 72.1% 299/94230402 0.0% 26/298 8.7% 106871627 83342928 +3368 chr4 + 190214555 136372051 136372050 136372140 90 CAAGTACAGCAAAGTAAAACCCTTTAACATTTAAAGAGCTAGTTTTTTGTTGTTGTTGTTTTTGTTTTTGTTTTACCTCCCTCTGCCCCC chr4 + 94230402 38624990 38624989 38625070 38624990 38624989 38625070 81 CAGATACAGCA--------TCCATCAA-ATGTGCAGAGCTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCTCTTCTCTC ..::.......--------:..x.:..-..x.:x......:x.............x.......xx.........:::.:.....x.:.:. 11M8D8M1D62M 61/81 75.3% 81/94230402 0.0% 9/81 11.1% 97747061 92467494 +13555 chr4 + 190214555 136408564 136408563 136408881 318 AAAAAGTAAATCCACATTATACACACTACATAGTTTAATCCCAAATTGGATCTACCTTATCATTGAAGTAACATGAATATATTTAGTTTTTCACCTGATATGAAAAGGTGTCAGTTCAATTCT--TCCTCTCTGATTTCTGTCTTTGACTAGGGCATTATTACAAATTGCCCTGAGGCATATCTTTCCTTTTAATACCATGTCTCAAATGCAAACTTTCAGCAGGTGGTTATTGTTCAACATTATGTAACCAAAAATAAATGCCACCTAGTTATTAAACTGTCAGAACATTAAAA-GTGAGTAAATCATAACAAAGTTTAT chr4 + 94230402 29506631 29506630 29506948 29506631 29506630 29506948 318 AAGAAGTAAACCCTAATTACATATGCTGTAATATTTAATCCCAAATTACGTCTAC-TTACAAATGAACCGAAGTTAATACATTTAGTGTTTCACATGAGCCAAAGCAGTGTCAGATCAATTTTGTCCCCTTCTGATTTCTGCCTTTGACTGCAGAATTACTACAAACTGCCTTGAGGCATCCCTTTCCTTTTAATAACATGCAGAAAATACAAACCTTCAA-GTGTAGTTATTGTTCAGTACTACATAGTATAAAAGAAGAAACGTGTAGTTATTAAAATGTCAG-ACATTAAAACATGCACAAATCATAAGAAACTTCAT ..:.......:..xx....:.:.::..::.xx:..............:x:.....-...:x.x....x::.x:.x....:.......x......x...xx::..:x:.......x......:.--:..::...........:........:x:.x....:......:....:........x:..............x....:xxx....:.....:....:-:x..:...........::.:..::..::xx....x..:x:x.::x...........x......-.........-:..x::.........x...x..:.. 55M1D67M2I96M1D63M1D9M1I25M 229/315 72.7% 318/94230402 0.0% 6/315 1.9% 106901933 83312622 +4078 chr4 + 190214555 136423615 136423614 136423786 172 AAAGAAAGATAGAAGGAAAGAAGAAAGAAAGAAAGAAAGA-------------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAG---GAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAA-AAGAGAGAAAGAAAGAAAGAAA chr4 + 94230402 65771148 65771147 65771337 65771148 65771147 65771337 190 AAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA ...x..........:x.xx:::x.::.xx..x......x.-------------.:....:.....:.:x..:.:...:.:..:x.x.:...x-.:..:..::.....xx.:..x:.:..x:..x.---.:.......:..::.:x...x.....:x.x......x..-..x.:..xx..x..:...:... 40M13I39M1I32M3I39M1I22M 112/172 65.1% 190/94230402 0.0% 18/172 10.5% 70652467 NA +3302 chr4 + 190214555 136423628 136423627 136423702 75 AGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA .......:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 95311450 NA +3072 chr4 + 190214555 136423723 136423722 136423791 69 AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAAGAGAGAAAGAAAGAAAGAAAATTTT chr4 + 94230402 29014674 29014673 29014742 29014674 29014673 29014742 69 AAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAACCCTT ...x:.:.:..xx.x:.......:::...::::.....:.....:...........:..x.:..x::.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 107409049 82805506 +3129 chr4 + 190214555 136451062 136451061 136451127 66 TTGAAATATATGTGTATATATAAATACACACATATATATACATACATATATAGAGAGAGAGAGAGA chr4 + 94230402 10342906 10342905 10342963 10342906 10342905 10342963 58 TTAAAATATATATGTATA---AAA-----GCTTATATATACATACATACACAGAGAAAGGGAAAGA ..:........:......---...-----:.x................:.:.....:..:..:... 18M3D3M5D37M 49/58 84.5% 58/94230402 0.0% 8/58 13.8% 126108156 64106399 +3186 chr4 + 190214555 136491446 136491445 136491512 67 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834599 85834533 85834532 85834599 67 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ...x:..x.....x.................:.xx:...:xx:...:....:..x...:..:.x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 50656913 NA +3112 chr4 + 190214555 136491447 136491446 136491511 65 ATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063363 46063299 46063298 46063363 65 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA ...:..:...:::.....:..x.::::...x::...:..........:......:xxx....... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 90428148 NA +3056 chr4 + 190214555 136491448 136491447 136491510 63 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x:..x.....x.................:.xx:...xx::...:....:..x...:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 50656915 NA +3005 chr4 + 190214555 136491450 136491449 136491513 64 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATATT chr4 + 94230402 85834533 85834532 85834596 85834533 85834532 85834596 64 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTT ...x::.x.....x.................:.xx:.x..x::...:....:..x...:..:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 50656917 NA +3020 chr4 + 190214555 136491463 136491462 136491511 49 GTGTGTGTGTGTGTGTGTGTGTGTCTATATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265567 79265519 79265518 79265567 49 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACA .............::........x..:......:...:.::.:.::.:. 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 57225944 NA +3006 chr4 + 190214555 136502135 136502134 136502180 46 TTAAAAAAAAACAAAAAGGAAAAAAGAAAACTCACACACATAAAAA chr4 + 94230402 54830722 54830721 54830767 54830722 54830721 54830767 46 TTAGAAACAAACAAACAAAAAAAAAAAAAACCCACACACTTAAAAA ...:...x.......x.::......:.....:.......x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 81671413 NA +3294 chr4 + 190214555 136507336 136507335 136507420 85 TACGTTTGTGTTGGAGGCAGTGGTGAGAAACAAAGTTGGGGAGATTTCAATACATAAAGCAACTTGAAATAATGAAATTTTATAT chr4 + 94230402 42304079 42304078 42304163 42304079 42304078 42304163 85 TGCAATTTTGTTGCCATCTGTGAGGAAAAACAAAGTGAAAGAGATATGATTTCACAAAGCTCATAGAAATAATGAAGTTTTATAT .:.:x..x.....xx:x.x...:x..:.........x:::.....x.x.x.x..:.....xxx.x...........:........ 85M 59/85 69.4% 85/94230402 0.0% 0/85 0.0% 94203257 NA +3155 chr4 + 190214555 136522661 136522660 136522734 74 GGGAAAAGAACAACAACAAAAAACCCAAAAAACAACAACAAAAAAAACCCAACAACAACAAAGCAGAACAAAAA chr4 + 94230402 18496611 18496610 18496684 18496611 18496610 18496684 74 GGCACAAAAAAAAAACCAAAAAAACCAAACAACAACAACAAAAAAAAACCCACCACCATACTGCTGGAAAGGAA ..x.x..:..x..x.x.......x.....x.................x..x..x..x.:.xx..x.:.x.::.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 118026050 72188505 +3270 chr4 + 190214555 136542484 136542483 136542552 69 CACAGTTGCATCCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ......x.--.x...x....:.:........:..::........x.xx.x...x.x...........:. 8M2D59M 52/67 77.6% 67/94230402 0.0% 2/67 3.0% 60509287 NA +3396 chr4 + 190214555 136566368 136566367 136566434 67 GTGCTCCTGTAGTCCCAGCTACTTGGGAGGATGAGACAGGAGAATCACTTGAACCTGGGAGGTGTAG chr4 + 94230402 76033204 76033203 76033270 76033204 76033203 76033270 67 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG ....x.x......:...........::...x....x.xx.x...x..........::.:..x.x.:. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 60533164 NA +3060 chr4 + 190214555 136566701 136566700 136566751 51 TCCATATATATACATATATATATGTGTATGTGTGTGTGTGTATATATATAG chr4 + 94230402 43288480 43288479 43288530 43288480 43288479 43288530 51 TCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAG ..x.x..........:....x...::...:.....x....:.......x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 93278221 NA +3049 chr4 + 190214555 136566708 136566707 136566781 74 ATATACATATATATATGTGTATGTGTGTGTGTGTATATATATAGTA--TGTATATATGTATATATGAAAATATTTT chr4 + 94230402 24523911 24523910 24523986 24523911 24523910 24523986 76 ACAGGCATATATATATGTTTACTTGTGTGTGTATATATATATAATAATCTTATAGCTGTTGACAGAATAATGTTCT .:.x:.............x..:x.........:..........:..--:x....xx...xx.:.x:.x...:..:. 46M2I28M 54/74 73.0% 76/94230402 0.0% 2/74 2.7% 112042797 78171758 +4143 chr4 + 190214555 136581690 136581689 136581804 115 CACAGACTTCATTTCTTTTCTTTC------TTTCTTTCTTCCTTCCTTTCTTTCTTTTTCTTTCTTTCTTT----CCTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTGTTCTTTCTTTCTTTCT chr4 + 94230402 63697111 63697110 63697235 63697111 63697110 63697235 125 CACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT .........:...:..:.:.....------.....:.:..::.:.::x.::....x....xx.....x.:.----....:x:.:....x:xx.:.:.:...::.:.:.x.........:....:. 24M6I41M4I50M 78/115 67.8% 125/94230402 0.0% 10/115 8.7% 72884579 NA +3715 chr4 + 190214555 136581700 136581699 136581828 129 ATTTCTTTTC-TTTCTTTCTT---TCTTCCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTT-----------CTTTCCTTCTT-TCTTTCTTTCTTTTGTTCTTTCTTTCTTTCTCACTTTCATTCTTTCTTTCCTTTT chr4 + 94230402 22118278 22118277 22118422 22118278 22118277 22118422 145 ATTTCTTCTCATGTCCTTAGTACCTCTTCTTTTCTTTCAAACCTTTTCTCTCTCCATTTCCCACTTTTTATTTGGTCACTCTTCTTCTTATCTTGCCATATGTTGTTGTTTTGTACCTTCTCTTTTTTATTCTCCCTTCTTCTCT .......:..-.x..:..xx.---.....:..:.....xxx.:......:...::x.....:x....-----------..:.:......-....x.:x.x.x.....x...:x.x.:.....x:...:.....::...::::.:. 10M1I10M3I43M11I11M1I55M 90/129 69.8% 145/94230402 0.0% 16/129 12.4% 114463422 75751133 +13043 chr4 + 190214555 136583671 136583670 136584094 424 ATTACAGAAAGATGTCTGGT---TACTTGAAAGACTTTGATACATCTGTGCTATTCCCTGTGTGCTGACATATGTCTACTTGCAACAGAAAGAAGAAACTTCAAGGATGAGCTCCACTCATTTCAGTAATTGGTATTCCAGCCTGCTAGTTCAGATAGATTATTGTTGGTGTGATAGGCAGCTAACATT-AATGTCAAATTAACATAAACTATAAGGATGACAGTATGCTGGAATTTGCATAATTTTCATCAGAATCTAAAGGCT-TTTGAAATTGATTCTCAAGGACTAATAAAGACATATTAGTTTACTTACTATAACATCTTTGGGATGTTATTTAAAATGTC-ACATTCTAATTTT---AAATCAGTGATCTGCAACTTAG---GATAATGGACAGTATATGAATTTTAGAC-ACAAATTATTTATGTGAAAT chr4 + 94230402 29539920 29539919 29540342 29539920 29539919 29540342 423 ATTACAGAGAG----CAAGTACATGCTTGAAAGACTTT--CACAATACTGATACTTCCTGTTTGATGACGTAAGTCTAATTACACTAGAAAGGAGA---TTTAGAGGTGAGCTCCAACCATTGCTGTAATTGGTATTCATGCATGCCAGCTCAGATAGATTATAGTCAGAATGATAGACATCTAACTTTAAATGTCAAATTAACATGAAATATAAAGACAGGAGTATGCTGTAATTTGTATAAGATACATAGGAAGGAAAAGACTATCTAAAATTTATCCTCTAGAAGCAGC-AATACATAGTACTTAACTCAGCATAATTTTTTT----TTTCATTTTTAATGACAAAAAACTAACACTAGAAAATTAGAGATCTCCTACTCAGTAAAATATTGCACACAATAATAAATATGGACTAGAAAGACTTAATGTAGAAT ........:..----.x:..---.:.............--:...x:xx..x..:.:.....x..x....:..x.....x..:..x:......:...---..:.::.:.........x:....x.x.............xx..x...:..:.............x..::.x:......:..x.....x..-................:..x.....:..:::x.........x......:....xx.x...x:...xxx....:..-.:.:.....x..:...x..:.x:.::-..x.....x..x..x...:.x:....:x.:...----.x.:....xx....x.-.x.xx....:x:.---....:..x.....x.x...:..---:...x..x...xx...xx..x.x.:...-.x...xxx..x....::... 11M4D5M3I15M2D56M3D90M1I75M1I26M1D33M4D16M1I13M3I22M3I28M1I20M 297/410 72.4% 423/94230402 0.0% 27/410 6.6% 107043751 83170804 +3087 chr4 + 190214555 136586060 136586059 136586121 62 TGACATATATACATATGTGTGTGTGTGTGTATATATATATATATCCTTCATTATTTTTCCTT chr4 + 94230402 29797137 29797136 29797198 29797137 29797136 29797198 62 TGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTT ..:....:....:....:......:......x.........:.:x.xxx:xx......x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 106788923 83425632 +3097 chr4 + 190214555 136588815 136588814 136588900 86 GAGCAGGAAGGGCAGGAGAAGGAGGAAGAAGAAGAGGAGCAGGAAGAGGAGGATGAGGACGAGGAGGAGAAAGAGGAGGAACGAAG chr4 + 94230402 87436489 87436488 87436573 87436489 87436488 87436573 85 GAGCTAGAGGGGTGGGGGG-GGAGGAGGGAGAGCACGGGCAGGCCGGTGAGGATGATGAGAAGGAAGAAGGAGCAGCAGAGCGGAG ....x:..:...::..:.:-......:.:...:x.x.:.....xx.:x........x..x:....:..:::..x:.x:..:..:.. 19M1D66M 55/85 64.7% 85/94230402 0.0% 1/85 1.2% 49152326 NA +3283 chr4 + 190214555 136619985 136619984 136620113 129 GTATATATATATGTATATATATGTATATGTATATATATATGTATATGTATATGTATATATATATGTATATGTATATATATATATGTATATATATATGTATATGTGTATATATATATATATATACATATT chr4 + 94230402 91738172 91738171 91738298 91738172 91738171 91738298 127 GCATATAGATATGTTTTCTTATG-ACA-GCATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTT .:.....x......x.x:x....-.:.-.:.....x......x.x:x.:.:x:xx.....x....:........xx...x.x.x..x..:.x.x..::...::x:x.:.....:..:x:....:..x.. 23M1D3M1D101M 83/127 65.4% 127/94230402 0.0% 2/127 1.6% 44881813 NA +3405 chr4 + 190214555 136619985 136619984 136620113 129 GTATATATATATGTATATATATGTATATGTATATATATATGTATATGTATATGTATATATATATGTATATGTATATATATATATGTATATATATATGTATATGTGTATATATATATATATATACATATT chr4 + 94230402 91734574 91734573 91734700 91734574 91734573 91734700 127 GCATATAGATATGTTTTCTTATG-ACA-GCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTT .:.....x......x.x:x....-.:.-.:.....x......x.x:x...:x:xx.....x....:........xx...x.x.x..x..:.x.x..::...::x:x.:.....:..:x:....:..x.. 23M1D3M1D101M 84/127 66.1% 127/94230402 0.0% 2/127 1.6% 44885411 NA +3373 chr4 + 190214555 136619992 136619991 136620106 115 TATATGTATATATATGTATATGTATATATATATGTATATGTATATGTATATATATATGTATATGTATATATATATATGTATATATATATGTATATGTGTATATATATATATATAT chr4 + 94230402 89812949 89812948 89813060 89812949 89812948 89813060 112 TATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .......xx:.:.x...:---.:.....x...x:...:.......x..x..::x.xx:..:....::.x.:x:x:...::...:.x:x...:.:.....:.......:.x..x.. 18M3D94M 72/112 64.3% 112/94230402 0.0% 3/112 2.7% 46807043 NA +3106 chr4 + 190214555 136620015 136620014 136620079 65 ATATATATATGTATATGTATATGTATATATATATGTATATGTATATATATATATGTATATATATA chr4 + 94230402 46063299 46063298 46063363 46063299 46063298 46063363 65 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA ...:..:.:.::..:.....:x.:.:..:.x:......:.x......:.......xxx....... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 90556716 NA +3246 chr4 + 190214555 136628629 136628628 136628711 83 TAGTTTACTCATTCATTAAATACACACACACACATATACACACACACACACACATATACACACAAACACACACACACACGCAA chr4 + 94230402 54963188 54963187 54963265 54963188 54963187 54963265 78 TAGTTTGTATATTCAT-----ACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAA ......::x:......-----...x.::.....x....:...........xx..::.:.:.x..x.......:x:.:...x.. 16M5D62M 56/78 71.8% 78/94230402 0.0% 5/78 6.4% 81665441 NA +3290 chr4 + 190214555 136631581 136631580 136631674 94 CATGGTGGCTCACACCTGTAGTCCCAGCTACTAAGGACGCTGAGGTGGGAGGATCACTTGAACCGAGGAGTTTGAGGTTGCAGTGAACCATGAT chr4 + 94230402 76033197 76033196 76033285 76033197 76033196 76033285 89 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGAT ..::....:x...:--......:.........x:::.x......x:xx.x.:.x..........x..:..:..x:..:..:..---.x...... 14M2D67M3D8M 63/89 70.8% 89/94230402 0.0% 5/89 5.6% 60598384 NA +3123 chr4 + 190214555 136637693 136637692 136637732 40 AAAACAAAACAAAACAAGCAAACAAAACAAAAACAAAAAA chr4 + 94230402 39573995 39573994 39574034 39573995 39573994 39574034 40 AAAGTAAAACAAAACAAACAAACAAAACAACAACAAAAAA ...::............:............x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 97063698 93150857 +3050 chr4 + 190214555 136646718 136646717 136646771 54 TGTGTGCCAATGTGTATTTCTCTTTTGCTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 73754479 73754478 73754532 73754479 73754478 73754532 54 TATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTT .:...x..x:.:...x..:..x::..:....:..:................... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 62892239 NA +3517 chr4 + 190214555 136696406 136696405 136696463 58 AATCTCCC--TTTTTTTCTGTCTTCTTTTTCTTTCTTTTTTTTTTTTTCTATGAAACCAA chr4 + 94230402 223052 223051 223111 223052 223051 223111 60 AACCTCCTGGTTTGTGTCTGTCTTCTCTTTCTATCTTTTTTTTTTTTTCTTTGTAACCAA ..:....:--...x.x..........:.....x.................x..x...... 8M2I50M 50/58 86.2% 60/94230402 0.0% 2/58 3.4% 136473354 53741201 +3174 chr4 + 190214555 136707705 136707704 136707768 64 CATGGCAGCAAGCACTGAGAAATTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAAC chr4 + 94230402 80244786 80244785 80244849 80244786 80244785 80244849 64 CAAGGCAGGAAGCACTGGGGAGGGGGAAAAAGAAAAAAGAAAAAAAAATGGAACAAGGAAATAC ..x.....x........:.:.:xx:......:......:.........x::..x....:x.x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 56462919 NA +3152 chr4 + 190214555 136722609 136722608 136722690 82 ATTCTAAAATATCTTATTTTTCTAGTTTCTTTTCTTTATACTCTTGTTTTCATTCCTCTTGCTATTTCCTCA---TCTTATCTCT chr4 + 94230402 89682472 89682471 89682555 89682472 89682471 89682555 84 ATTTTAAAGTTCCTTATCTCTCTAGCTTCTTTTGTTTCTGCTTTCAGATCCTTTCCTCTTTCT-TTCCTTCAGGGCCCTATTTCT ...:....:.x:.....:.:.....:.......x...x.:..:.::xx.:.x........x..-..:.:...---:.:...:... 63M1D8M3I10M 58/81 71.6% 84/94230402 0.0% 4/81 4.9% 47040137 NA +3111 chr4 + 190214555 136747088 136747087 136747128 41 AACAAAATAAAACAAAAACACACAAACAAACAAACAAAAAA chr4 + 94230402 64941617 64941616 64941657 64941617 64941616 64941657 41 AAGAAAATAGAACATAAATACACAAACAAACAAACAAAAAA ..x......:....x...:...................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 71805471 NA +3002 chr4 + 190214555 136756439 136756438 136756517 79 AGCTAATTTGCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAACATATATATGTTCTACTGATGATTATGAAAGA chr4 + 94230402 7417640 7417639 7417718 7417640 7417639 7417718 79 AGCTGGTTTACAAAAAAAAAAAAACAAAAAAACAAAACAACAAACACCTGCTATCAGCCTCACTGAATATTACTAAAAA ....::...:..............x.......x.:..x.:x...x.x.xxx...xx.::::.....xx....:x...:. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 129338799 60875756 +3079 chr4 + 190214555 136759193 136759192 136759240 48 CCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAAAAAGAAATAT chr4 + 94230402 47473571 47473570 47473618 47473571 47473570 47473618 48 CCTCCAAAAAAAAAAAAACAAACAAAAAACACCCAGAAACAGAAGTAT ....x.............x...x......x.x.......x....:... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 89285622 NA +3106 chr4 + 190214555 136763712 136763711 136763791 80 TGTGCATGTTGGTTTCCTTTATGAGGTTTCTTTCCATCTTGCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 + 94230402 33216265 33216264 33216344 33216265 33216264 33216344 80 TATTCTTGTTGTTAGCTTTTGGAAGTCTTTGCCCTATTTTGTCTTCTCTTTCCCTTTTATTTTTTGTTTTCTTCTTTTGA .:.x.x.....x.xx.:...:x:..x:..:x::.:..:...:::.....:...:....x......x....:..:....:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 103547447 86667108 +21788 chr4 + 190214555 136802944 136802943 136803699 756 AGCTCTTAAATTACTGTGGTCTATGTCCATTAAACTTCCAGTCAATTTTGAAGATGAT---------GTATTATACTACCT------CAGAGGATGCTTGTGATGAATTCCCTTG-------CACACCAAGAAATTACAGTTTCTATATAACTGCCT--TCTATACATAACACAACCTTTGGTCTATAATTTCTGTACTCATGTTCAAGAACCATAAAGTCCCGGATTTCACATTCAAATGTCATTA----TTAACTGT-TTTGCTGAGAATAAAATAAATTTTGAGAGAAAAAAAAGCACCAAAAACCAGTGTCATAGGATCATTCACGCTCCGTCTGTTGTTCCTCTCTCTCCTATGACAACCTCAAGGCACATTAAAAGTATTGAGTGCTCCCTAAAAAATACCAGTACAATAGACC-CACTCTGAGAGATGAAATCAGAAGAGTTCAAAAGTAAAAGGAATGTTCTCTTTCTCAGTAG--------GCTGGTTAATTTTATATACACTCATTT-GATTGATTTTT-----------------------------AACACTGATGGAAAGAAAGTAACTT--------TTCAGTGCAGAAACAATTACAGCAGGAGCTGCTATCCTTTACTGAAGGAACAATGCTATTTATAAAGGAAGAAAATTACAAAGGTTTGTTTCCTGCTGCTAATTTTGCTAGGGCACTGAATTAGTATGATACTGCTGGGAGCTGCGGGAGACCTTTATGATACATGAGCAGGAAGGAGCTGACCTGATGTGTAGCATTAATCATCAACAGCTCCAGTTAGCGCGTGTGTCAACCAGAGGCC chr4 + 94230402 29569846 29569845 29570642 29569846 29569845 29570642 797 AATTCACAGATTCCTTTGG-----GTCCACTGGTCTCCCGATCAGTATTGAACAAGATCTATCACAGTTATTATAATGCATGCTACACAAAGGTTTTTTGTGTTTACTTCTTTTTTTATCATCCTAATAAGAAGCCAGGATATAGATGCACTTATCTGTTGTATATACAGCTCTGCCTC--------AATTTTTGTATCCTCATCTGGGATCAA----------ACTTCTATGAGTAAATGGAATTAAATATTAATTATCTTTTCCAAGAAAAAAATGCTTTTGTTCAGATTAAAAGG------ACAACAGTGT---GGGTTTATTCATGCTCCATCTGTTGTTCTATTTTCTCCAATGGCAACTTCAAAGCACTTTAGTATTACTGAGTGTTTGCAAAGGAATGGCAGCACAGTGGTCCTCCCTCAGAGAGA-GAAATCAGAAGAGTTCAAAAGTGAAAGAAATTCTTAGTCACTCAGCTGTTTAATTCACTATTTAATTGTATGTGTATTTATTTCTATCGAtttcttcttcttttttttttttttttcctttttAAAGGTTGATGGAGAGAAAATAACTTGCAGCCTTCTTAACACAGGAACAATTACAGCAGGAGCCCATATCCTTTACCGAATGAACAATGCTATTCATAAACGATGAAAATTTCAAAGGTTTGTTTCCTGCTGTTAATTTTGCTAGTGAGCTGAATTAGCAGGGCACTGCTGGGAACAGCAGGAGATCTTTATGATACTTTTTCAGAAAAATAAAGATCTGATGATTGGTGTTAATCATTAAAAA--GCAGTTATTGTTGGTGTCAAAAAAAGATC .::..x:.:...x..x...-----.....:.::x..:..::...:.x.....x.x...---------x.......x.:.x.------..:...x.x:.....x.x.x...::..x-------.x:.x:.....:::.x::.x.xx..::.x:.::..--.x....:.:.:.x.x:...:--------.....:....::.x::.::::..x.x.----------:x..::.::xx:.....xx....----....:.:.-...x.::....x.....:xx...xxxx...xx....:.------.x.x......---:..x.:.....:.....:..........:x:.:.....x...:....:....:....x...:x.x..:......:.:x.x..::...:x...:...:.:.x..-.x...x......-......................:....:...x:.:xx.:x.....:x.--------:..:x......x...:.::.:.:....-x..:.....:.-----------------------------..x::.......:.....:......--------:.:.:::...:..................:xx..........:...x.............:.....x..x.......x....................:............x.x:.........:.x.::..........:.x..:.....:...........x.xxx...:..::x:xx..:......xx.:.::........:..x.:--x......x:.:xx.......xx.:..::. 19M5D34M9I14M6I28M7I35M2I20M8D27M10D23M4I8M1I38M6D10M3D103M1I12M1D48M8I27M1I11M29I25M8I210M2D29M 503/721 69.8% 797/94230402 0.0% 111/721 15.4% 107233098 82981457 +16795 chr4 + 190214555 136829193 136829192 136829675 483 TTAAAACTACTCTCACAAACAAAAATGTTGAATTTATAACTCATTCTGCCTCTTTTACATGCATGTGATTATTTTGTCCAAAATAAGATAATCCAAATGAAAAGTAGATTTTATTACTTTGGGTAAATTTGCCAACTG-ATTTCAAAAAGAAAAATATAATGGGTTAGGTGGATTTATGGGGCAAATAACCCACTCTTGGCAATAGGATGCTAAGAAAAAGCTGGTTTAAAAGTTAAGAAGCTCATAATGCCAGCTCAGAATTTATAGCTAACAGTTTTATAGGCCAAAGCCACTATGCAGGCATTCTTATCCTGCAGTGCAAATAGGATTACCCTTCCAAGCATTATCCTAATGTGGAATTAAACTGTCAAGTTGGCTTGCTTGTTGCATAGACTTGCACATAAGATGAATGTAACTCTGGGTAAAGTTCAATATTGTTCCATCTGTTAAGCACCTTTTTCTTACAGAGACACAAAAGCTGGA chr4 + 94230402 29577639 29577638 29578087 29577639 29577638 29578087 449 TTAAATATATTTTAATCAAAAACAGTCATAAGTTTAAAACTTATTAT----------------CATGATTCTTCAGT-----------TAATCCATTTGAAGTGAAAATTTTATTGCTTTTGATGTGTTTTTCAACTGTATTTAAAACAAAGAACTGGGCATGGGTAGGAGAAATTATCACA-AAGTTCCTCACTCAC--CAATAAACTGCTAAGAGAAAGCTGGTTTACAAGCTAAGAAGATCACGACGCCAGCACACTATTTAGAGCTAATGGTTTTATAGGCCAAAGCCACTAGTAGGGCATCCTTATCCTGCAGTGTGAATAGGATTATCCCTGCAAACATTCCCCTAACATGGAATTAAGCTGTCAAGTTTGCTTTGCTGCTGCATGGACACATACACAAAATGAACACAAGTTCAGGTCAAGTGTAATACTGCTCTG-CTATT----ACATATTGCTCACAGAGCAAAAAAAACAGGA .....xx..:.:.x.:x..x..x.:.xx.:.:....x....:...x.----------------::.....x..:x..-----------.......xx....:x.x.:........:....x.:.:x:...x:......-....x...x.:.:..x.:x:xxx..x....x.:.x....x:x:-..:.xx.:.....x:--.....::x........:............x...:.......x...::.:......x..xx.....x......::......................xxx:.....:..............::..........:..:.x...:....x:.....::.........:..........x....xx:..:.....:...x:::...:..:.....:::..x.:::...x....x:....:..:..::-..:..----..x.x..x..:......xx.x....:.x... 47M16D14M11D50M1I43M1D15M2D243M1D5M4D31M 319/448 71.2% 449/94230402 0.0% 36/448 8.0% 107251554 82963001 +3929 chr4 + 190214555 136835722 136835721 136835805 84 ACGTGGTGATGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...:....:.--......:...........::........x.xx.x...x.:.........:.:..x:xx:..:..... 15M2D67M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 60802526 NA +3239 chr4 + 190214555 136884832 136884831 136884874 43 AAAAATGTAAAAAAAAAATGGAGGAAAGGTAAAAGAATGTTAA chr4 + 94230402 44003644 44003643 44003686 44003644 44003643 44003686 43 AAAAGTGGTAAAAAAAAATGGAGGATAGGTAAAAGAATGTTAA ....:..xx................x................. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 92881188 NA +3735 chr4 + 190214555 136900603 136900602 136900685 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 8M2D73M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 60867406 NA +3161 chr4 + 190214555 136983658 136983657 136983756 99 ATCTCATGCTGCATAATCATTACAGACATTCAAAACTAAGTAATAAACTAAGTAATAAAATAAACTAAGTCATAACAAGTAATAAAACATTAATTAATA chr4 + 94230402 69111839 69111838 69111930 69111839 69111838 69111930 92 ATTTTATTCCTCATGGTATTTATAGA-------GAGCAAGCAGGAAACTAAGTAATAAGATCTAATAAATCATGATAGGTGAAATTACATTATTTAATA ..:.:..x.:x...::.xx...:...-------:.x:...:.:x..............:..xx.x...:....:.:.:..:.x.xx......x...... 26M7D66M 63/92 68.5% 92/94230402 0.0% 7/92 7.6% 67871819 NA +3509 chr4 + 190214555 137015067 137015066 137015120 54 GTTATATATCTGAAACATCAGCTACACATAATGGTGCATTAGTGTAGATACAGG chr4 + 94230402 29627561 29627560 29627614 29627561 29627560 29627614 54 GTAATATAACTGAAACATCAGCCATTCATAATAGTACATTAGGGTAGATTCAGG ..x.....x.............:.:x......:..:......x......x.... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 107387506 82827049 +29012 chr4 + 190214555 137015777 137015776 137016319 543 ATAAAGATCAAATGT-TTTGGATATAAAATAATGATGGGGTTTAATATTAAAGGTGTCAGCTATGAAGACCACATGGTTATTGTGAGAAATAACATTTAACCTTTCTCTTGTGGCTGACGGAGGCCAATGCAGTATTTTATTATCAACAATGGCAGTTGATTTATTACCACTGTTTCTACTCCAGTAAAGCCACATTAGGCTGGGCTTGATGTATCATTTGTTATCTTCAACCCCCCTGCACACTTTCTGCATGCATAATCTCTT-TGTTCTAGCAAGTTTTAAACAGAGAAGAGTAAATATTTAAGTAATTCTTCCAAATTCATTAGAAACTGTAGAGGTAAAATCCACTAGCTAAATAGATTATGCCAGACAATGTCTGACGTAATCATAAAGTTCTGGCTTCAAGAAGAATGATGGTTATACATCTGAAACATCAGCTATGCATAATGGTGCATTAGTGTAGACAGAGCAGTGACAGAGAATAAATCAAAGGCACACTTTCAGATGGGAATAAAATTTTGTGGAATAAATTCAGGTCAGATA chr4 + 94230402 29627149 29627148 29627686 29627149 29627148 29627686 538 ATGAAGATCACACTTCTTTTCACAGAAAATAATGATAGAGTTTAGTATGAAAGATGTCAGAAATGAAGACCATATGGTTATTGTGAGAAATAACATTTAACCTTTCTCTTGTGGCTGATGGAGGCCAATGCAGTATTTTATTATCAACATTGGCAGGTGATATATTACCACTGTTTCTACTCCAGTAAAACCACATTAGGCTTTGCTTGATGTATCATTTGTTATCTTCAGGCTCCCTATACACTTTCTGCATGCATAATCTTTTCTGTACACAC-----TTGAACAGAAAATGGTAAATATTTAAGTCATGATTCCAGGTTTGTCAAAAGCTTAGGGGCTGAAATACTGTAGCTAACTGGATTGTATTAGATGATTCTTGATGCTAACATAAAATTTAAAACTGAGAAAGAGTGAT-GTAATATAACTGAAACATCAGCCATTCATAATAGTACATTAGGGTAGATTCAGGAATGACAGAGAATAGATCATTAACAGAC-TTCAAAAGACAACACAAGCTCTTAGAATAAATTCATGTTAATTA ..:.......x.:x.-...xx.:.x...........:.:.....:...x....:......xx..........:.............................................:..............................x......x....x...........................:............xx..........................:x.:....::......................:..-...x.xx:.-----..:......:..x:..............x..xx.....::..::.:.:..:..xx:.:.x.:....x.xx.......x.:....:.:::...::..x::...:.:x.x......:..:x::x:.x.::....:....-..x...:.x.............:..x......:..:......x.....:xx..x.:............:....xx::..x..-....:.x.:x..:.x..x:.:x.:...........x..:.:x.. 15M1I249M1I9M5D137M1D82M1D44M 420/536 78.4% 538/94230402 0.0% 9/536 1.7% 107388628 82825927 +3189 chr4 + 190214555 137034503 137034502 137034561 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 61001297 NA +3017 chr4 + 190214555 137048092 137048091 137048186 95 TCTATTTCCACAAGGTAGCAGAGGAAGGAAAACAAAACAAACAAACAAACAAAAACAAACAAACAAAAAAAACGCCAGACCTTCTTTCCTAGCTA chr4 + 94230402 72335425 72335424 72335517 72335425 72335424 72335517 93 TCTTTCTTCCAAAGGCACCAAAT--ATTAAAAGAAAACAAACAAACAAAAAAATTGAAACAAAAAAGACAAAAATCAAACCATGCTGTTTAGCTA ...x.:.:.xx....:.x..:.x--.xx....x................x...xxx.......x..:.x...x::..:...x.x:.x::...... 23M2D70M 64/93 68.8% 93/94230402 0.0% 2/93 2.2% 64712667 NA +3101 chr4 + 190214555 137048100 137048099 137048163 64 CACAAGGTAGCAGAGGAAGGAAAACAAAACAAACAAACAAACAAAAACAAACAAACAAAAAAAA chr4 + 94230402 32624516 32624515 32624579 32624516 32624515 32624579 64 CACAATGAAGGAGAGCAAAAAAAAAAAAAAAAACAAACCAACAAAACCACAAGAGTAGAAAAAA .....x.x..x....x..::....x....x........x.......x..x.x:.::.:...... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 104423584 85790971 +3025 chr4 + 190214555 137048120 137048119 137048162 43 AAAACAAAACAAACAAACAAACAAAAACAAACAAACAAAAAAA chr4 + 94230402 31158708 31158707 31158750 31158708 31158707 31158750 43 AAAACAAAACAAACAAACAAAAAAAAACCAACAACCTGAAAAA .....................x......x.....x.x:..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 105889412 84325143 +3078 chr4 + 190214555 137048120 137048119 137048162 43 AAAACAAAACAAACAAACAAACAAAAACAAACAAACAAAAAAA chr4 + 94230402 28037178 28037177 28037220 28037178 28037177 28037220 43 AAAACAAAACAAACAAACAAACAAAAATCCACAAGCAAAGAGA ...........................:xx....:....:.:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 109010942 81203613 +3028 chr4 + 190214555 137080039 137080038 137080078 40 GGTAACTTTTTGTTTGTTTGTTTGTTCTGAGAGACAGAGT chr4 + 94230402 14993151 14993150 14993190 14993151 14993150 14993190 40 GGTAATTTTTTGTTTGTTTGTTTGTTTTGAAAGAAAGAAT .....:....................:...:...x...:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 122086888 68127667 +3063 chr4 + 190214555 137086767 137086766 137086862 96 ATGTTGATTTTTTTTTTAATGTACCTGTTGGCCATTTGTATGTCTTCTTTTGAGAAATGGCTACTTAGATCTTTTGCTCACTTTTAACTTTTTCAC chr4 + 94230402 74858877 74858876 74858972 74858877 74858876 74858972 96 ATTTTTTTTTTTTTTTTAATGAATCTGTGGAACGTTTTCATATTTTTTTTATAGAAGTTGCTTCTGCTATCTTTTAGCCATAGTTTGTCCTTGCAC ..x..xx..............x.:....x.:x.:...x:..:.:..:...xx....:.x...x..xxx.......:x:..:xx..x::::..x... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 62227890 NA +3614 chr4 + 190214555 137099532 137099531 137099660 129 TATTGCATATCAATAGTAATCAAAAGAGCATATAGGTGGCTATATTACTATCAGACAAAATAAGCTTTAAATTGAAACAGCTTACAAGAGCTAGAGAATACTATATATTAAAAGTTTCAATACAATAAT chr4 + 94230402 42416865 42416864 42416985 42416865 42416864 42416985 121 TATTGCCTGTTAAGA--AGTCAAAACAACAT------GAATATGTTAATATAATATAGAATAAGCTTTGAACTGCAACAGCTAATAAGGATCTTTTCATACCATAAATAAGAAATATACCCACAATAAT ......x.:.:..x.--.:......x.:...------.:x...:...x...x.x.:.:..........:..:..x.......x.:...::::xxxxx....:...x..x.:..:.x.xxx:........ 15M2D14M6D92M 82/121 67.8% 121/94230402 0.0% 8/121 6.6% 94682667 NA +9347 chr4 + 190214555 137124202 137124201 137124525 324 ATAATTTATATGTTTTTGGTATGAACATCTGTGGTTTAATCATTGTTT-------TTGCAGTAGAGCAAATGTAAAGCATATTTTACCTTAATTAAATCATTAAAGAGAAAATAGCCAAAAGCATAAGGCTTTTGAGAATGCTGATTTTAACCACATCACTAGGAATAG----AATAGTACCTTGTTCTCTTTATAG-CTGTGTTATAGCTCCCTGAGTAATTCAATTACAGTACAGCATTGAAGCCTATCTGCATAGTATTAACTGTAGTTAAGCTTTCCAGTCTCTAGAGGTCTCTGTACATCACTTTTTCACTCACTGCCATCCTTGCAGGAA chr4 + 94230402 29644058 29644057 29644388 29644058 29644057 29644388 331 ATTATATAAAAATATTAGGTA--AACATCTGTTTTTAGGTCTTTTTTTCTCCTACTTTTTGTATCATATAAACAAAGTATATTTTATCTTTCTCAACTACCTTTGAAGGAAATAAGCTAAACTCTATGACTTTCAAGA-TCATGAATTACATCACACAGGTTAAAACAGTTTGAATGTTACCTTATTCTCTTCATAGTCTGCTCTGTATCTGCC--AATGATCTCATTACTACGCACTGCTGAACTGTATCTGCATGTCATTAAGTGTAGTTTAGCTTTCCAGTCTCTAGAGGTCTCTGCATATCGCATTTTTGCTCAGTGACATCTCTGCAGGAA ..x..x..x.x:.x..x....--.........xx..x::..x..x...-------..x:x...xx::.x.x::....:........:...xx.:..x.xx:.xx::..:.....:x.x...x:x..x.:....::...-.xx...x..xx.:....:x:x.x::..:..----...:x......:.......:....-...:x:.:..x..x..--.:.:..::x.....x:::..x:::....x:x.........:x:.....x.......x..........................:.:...:.x....::....x..x....::........ 21M2D25M7I83M1D30M4I24M1I16M2D120M 215/319 67.4% 331/94230402 0.0% 17/319 5.3% 107480144 82734411 +3274 chr4 + 190214555 137135350 137135349 137135395 46 TATATATATACACACACACACAGAGACACACTTCTTTTCCTCAGTA chr4 + 94230402 4409088 4409087 4409133 4409088 4409087 4409133 46 TATATATATATATACACACACAGAGACACACACATTTTCCCCAGCA ..........:.:..................x:x......:...:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 132726262 57488293 +3117 chr4 + 190214555 137144022 137144021 137144067 46 TTTTTTTTCTTTTCTTTTTTTTTTTTTTTGAGACAGAATCTTGCTC chr4 + 94230402 52752939 52752938 52752984 52752939 52752938 52752984 46 TTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATTAGTC ......::.....................:.x.......x..:x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 84391083 NA +3286 chr4 + 190214555 137167348 137167347 137167421 74 ATATATATATATACACACACACACATATATACACATATATACATATGTATATACCTATATGTATACACGCACGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT .:.:.:....x:...::..x......::.....x.x....::....x.:.:.::x......:..:....:.x.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 114567150 75647405 +3050 chr4 + 190214555 137168586 137168585 137168652 67 TGTGTGTATACACATACACATATATATGTATATATGTGTATATATACATATATGTATACATGTGTAT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:..:::::.:..x::....:.x......:...:..:.:....:.:..x.....:...x..... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 50534662 NA +3013 chr4 + 190214555 137168786 137168785 137168863 78 ATATGTATACGTATACATATACGCGTATATGTATACGTATACATATGTATACATATGTATATACATATACGCATATAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x...:.x:..:.:::.:.::.:....xx:.:..x.:...........x.:.:....x...:..:.:.::..:.:.. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 51334248 NA +3344 chr4 + 190214555 137168787 137168786 137168917 131 TATGTATACGTATACATATACGCGTATATGTATACGTATACATATGTATACATATGTATATACATATACGCATATATACACATATAGGTATATATGTATATACATATATGTATATATACCTATATGTATAT chr4 + 94230402 91734567 91734566 91734697 91734567 91734566 91734697 131 TATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ....x:x:.:....x....::x:x:x....xxx:.:....x......x.x.x....x.xx..:..x..:......:..:xx...x..:x:.x..::x.x.......:.x:x.:......x.:x:.:..... 131M 80/131 61.1% 131/94230402 0.0% 0/131 0.0% 45434220 NA +3144 chr4 + 190214555 137249961 137249960 137250029 69 CAACTTGTTTATATATGTATATAGGGGTATATATATGTGTGTGTATATATATATACATATACATATATA chr4 + 94230402 37579492 37579491 37579560 37579492 37579491 37579560 69 CAGCTAGTATATGGCTTTACCTTGGGCCATATATATGTGTGTGTATGTATATAAATGCACACGCATATA ..:..x..x...:xx.x..:x.x...x:..................:......x.:::.:..::..... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 99670469 90544086 +3644 chr4 + 190214555 137260973 137260972 137261055 83 CATGGTGGCACACGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCAGGAAGATGGAGGTTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--......:........:..::........x.xx.x...x.:........x:....x.xx:..:.::.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 61227776 NA +3103 chr4 + 190214555 137274198 137274197 137274243 46 GACTCTGCCACTGCGTTTTTTTCTGTTTGTTTGTTTGTTTTATTTT chr4 + 94230402 89314581 89314580 89314626 89314581 89314580 89314626 46 GACTGTGTTGTTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTT ....x..::::..x........:..................:.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 47959617 NA +3186 chr4 + 190214555 137275026 137275025 137275083 58 ATATATATACACATATATGTACATATATACACATATATATGTACACACACACACACAC chr4 + 94230402 47135182 47135181 47135239 47135182 47135181 47135239 58 ATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC ....::........:x..xx::x...:....::...:.:.............:..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 90139844 NA +3301 chr4 + 190214555 137275031 137275030 137275094 64 TATACACATATATGTACATATATACACATATATATGTACACACACACACACACGTGTGTGTTTC chr4 + 94230402 40730003 40730002 40730066 40730003 40730002 40730066 64 TGTACACATTTGAAAGTACATATGCAGATATATATGCACTCACACATGCACACGTATGTGCCTC .:.......x.:x:x::.:....:..x.........:..x......::.......:....::.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 96545028 93669527 +3303 chr4 + 190214555 137290442 137290441 137290487 46 CCTCAAAAAAAAAAAAAAAAGTATGTATGTGTGTGTGTATATATAT chr4 + 94230402 88547317 88547316 88547362 88547317 88547316 88547362 46 CCTCAAAAAAAAAAAAAAAATCATATATATGTATGTGTGTGTATAT ....................x:..:...:...:.....:.:..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 48743125 NA +3746 chr4 + 190214555 137290442 137290441 137290530 89 CCTCAAAAAAAAAAAAAAAAGTATGTATGTGTGTGTGTATATATATATATATATA---CACACATACACACACATATATAGTGTGTGTATAA chr4 + 94230402 85548416 85548415 85548506 85548416 85548415 85548506 91 CTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT-TTTAGTTGTTGTAAAA .:...............:.:x...:.:.:........:...:..........x..---..x....:x.:.:x...-.x....xxx....x.. 55M3I17M1D16M 67/88 76.1% 91/94230402 0.0% 4/88 4.5% 51742026 NA +3315 chr4 + 190214555 137290443 137290442 137290517 75 CTCAAAAAAAAAAAAAAAAGTATGTATGTGTGTGTGTATATATATATATATATACACA-CATACACACACATATAT chr4 + 94230402 85548416 85548415 85548490 85548416 85548415 85548490 75 CTTCAAAAAAAAAAAAAGAGT-TATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ..:x.............:...-.:.....:.......::...:..........x:.:.-..x...::x.:..x:.. 21M1D36M1I17M 56/74 75.7% 75/94230402 0.0% 2/74 2.7% 51742027 NA +3312 chr4 + 190214555 137290446 137290445 137290496 51 AAAAAAAAAAAAAAAAGTATGTATGTGTGTGTGTATATATATATATATATA chr4 + 94230402 85548422 85548421 85548472 85548422 85548421 85548472 51 AAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA ...........:.:xx:..............::..:..........x.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 51742024 NA +3178 chr4 + 190214555 137290462 137290461 137290550 89 GTATGTATGTGTGTGTGTATATATATATATATATACACACATACACACACATATATAGTGTGTGTATAAATATATGTATATATTATATA chr4 + 94230402 23247724 23247723 23247812 23247724 23247723 23247812 89 GTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATA ..:......::::::::.x...:x.:....:..:.....:.:.........x:x.x.:x:xx.::..:....x..:.......x.x... 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 114042738 76171817 +4083 chr4 + 190214555 137290600 137290599 137290731 132 CAAAATATAGACGTGTGTGTTCATATATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTA--TATATATATATATATATATATATATATATATATATATATAAAGACAG------------CTGTTTGTAAAAATTGTACTTCAA chr4 + 94230402 85834512 85834511 85834657 85834512 85834511 85834657 146 CAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCACTTGAA ..:...:...x:xx.xx.x..:..x:..x.....x...:.............:.xx:....--:...:....:..x...:..:.x...::.:.:...:.:.:.x:.x.x.------------....x....x.....x:....x.. 61M2I47M12I24M 90/132 68.2% 146/94230402 0.0% 14/132 10.6% 51456088 NA +3527 chr4 + 190214555 137290619 137290618 137290708 90 TTCATATATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACAGC chr4 + 94230402 85834529 85834528 85834618 85834529 85834528 85834618 90 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC ..:x...x::.x.....x.:...............:.xx:.:..x::...:....:..x...:..:.x...::.:.:...:.x.x.::.. 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 51456090 NA +3540 chr4 + 190214555 137290624 137290623 137290699 76 ATATGTGTGTGTGTATGTGTGTGTGTGT--GTGTGTGTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x.....x.....:...........:.--:...:x.:...:....:..x...:..:.x...::.:.:...:.:.:.. 28M2I48M 55/76 72.4% 78/94230402 0.0% 2/76 2.6% 51456086 NA +3765 chr4 + 190214555 137290625 137290624 137290706 82 TATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x::.x.....x.................:.xx..:..x::...:....:..x...:..:.x...::.:.:...x.x... 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 51456092 NA +3372 chr4 + 190214555 137290632 137290631 137290700 69 GTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 70094141 70094140 70094209 70094141 70094140 70094209 69 GTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA ....:x..:.......x...x...x.....:.....:......x.:.xx.x:...x........::.:. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 67196491 NA +3243 chr4 + 190214555 137290633 137290632 137290706 74 TGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACA chr4 + 94230402 85834533 85834532 85834606 85834533 85834532 85834606 74 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA .:.x:..x.....x.............:.:...xx..:..x::...:....:..x...:..:.x...:x.x... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 51456100 NA +3020 chr4 + 190214555 137290635 137290634 137290703 69 TGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAG chr4 + 94230402 46063300 46063299 46063368 46063300 46063299 46063368 69 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGG .::......:::.....:..x.:::..:.x:..:...:.x......:......:xxx.......:..:. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 91227335 NA +3349 chr4 + 190214555 137290635 137290634 137290706 72 TGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACA chr4 + 94230402 85834541 85834540 85834612 85834541 85834540 85834612 72 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...:.x.................:.xx..:..x::...:....:..x...:..:.x...::.:.:.x.x... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 51456094 NA +3085 chr4 + 190214555 137290636 137290635 137290728 93 GTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATA---AAGACAGCTGTTTGTAAAAATTGTACTT chr4 + 94230402 79265519 79265518 79265611 79265519 79265518 79265611 93 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAA---TGCACTT ..:..........::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.:---.x:...x..x.x.:....---..:.... 65M3I18M3D7M 61/90 67.8% 93/94230402 0.0% 6/90 6.7% 58025117 NA +3431 chr4 + 190214555 137290637 137290636 137290706 70 TATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .:...x...................xx..:..x::...:....:..x...:..:.x...::.:.x.x... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 51456096 NA +3229 chr4 + 190214555 137290639 137290638 137290706 68 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAAAGACA chr4 + 94230402 85834541 85834540 85834608 85834541 85834540 85834608 68 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA .....x...............:...xx..:..x::...:....:..x...:..:.x...::.x.x.:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 51456098 NA +3071 chr4 + 190214555 137290642 137290641 137290697 56 GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 68837095 68837094 68837150 68837095 68837094 68837150 56 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .....:.............:.:.:.x...:...:...:.:..::.:.:..x.x... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 68453547 NA +5662 chr4 + 190214555 137307914 137307913 137308104 191 AGCTAAGCAAGAGTGAAAATACTGCCAAGTGGACTGGCTGCATGTCAGGATCACTGTAAAAATAAGTTGTGGTGAACTCAGGCCTGAGTCAAAGGCTATGGCCACAAAGGGCAGGATTATGGCTGAGTGATGGAGATCACATTCCATTCCAATCACTATGAAAATAGAAAGCAAATATGAAGAATGAAACT chr4 + 94230402 29696180 29696179 29696362 29696180 29696179 29696362 183 AACTGTGCTGGAGTATCCAAACTGCAAAACATATTCACTGTGGTTTAGCATCATTGAAAAA----GGCATGGT-AACTCAGGCCTAAGTCAACAGCAGCAGCAGCAGGAGGCA---TATTGGCTGAATACTGAAGATTAGATTCCATTCCCAGAGATATGAAAATAGAAATGAAACATGAAGTAGAAAGCT .:..:x..x:....:xxx.x.....x..:::x.:.x:...::xx.:..x....:..x....----.x::....-...........:......x:..x:::..x:..:::....---.xx.......:.:x..:....:.x..........x.xx:x..............xx...:......x.x:..:.. 61M4D8M1D39M3D75M 122/183 66.7% 183/94230402 0.0% 8/183 4.4% 107611734 82602821 +3330 chr4 + 190214555 137308047 137308046 137308156 110 AGATCACATTCCATTCCAATCACTATGAAAATAGAAAGCAAATATGAAGAATGAAACTTCAATGTGCATTGAAAATTATAAGCAGTTCAGTAAGAGAATGGAAGGTTTGG chr4 + 94230402 29815079 29815078 29815185 29815079 29815078 29815185 107 AAAGCAGATTCCTTTCCCATGAATATGAAAATAGAAAGCAAACATGAGGCAGGAAGCTGCGG-GAACACTGCAGA--GCAGGCAGCTCGGGGGAGGCATGTGGGGGTAGG .:.x..x.....x....x..x.x...................:....:.x.x...:..x.::-.x:..:..x.:.--::.:....:..:.x::::.x...x::..x.x.. 62M1D12M2D33M 71/107 66.4% 107/94230402 0.0% 3/107 2.8% 107492968 82721587 +3179 chr4 + 190214555 137335722 137335721 137335805 84 AAAAAAAAACAAAAAAAAACAAAAAAACTAAAACAAAAAAAATACAAACAAAAAAAAACCATACAAACAAAAAAAATCTTCAAA chr4 + 94230402 43574246 43574245 43574329 43574246 43574245 43574329 84 AGAAATAAATGAAAAAAGGTGGTTAAAATAAAACCAAAAACAAACAAACAAAAAAAACCCACCAAGATAAAATGTTTCCACAAA .:...x...::......:::::xx...x......x.....x.x..............x...:xx.:.:....x:xx..:x.... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 93761476 NA +3305 chr4 + 190214555 137335757 137335756 137335814 58 AAAAAAATACAAACAAAAAAAAACCATACAAACAAAAAAAATCTTCAAAGCTCAATAA chr4 + 94230402 48373520 48373519 48373577 48373520 48373519 48373577 58 AAAAACAAACAAACAAAAAAACCCCAAACAAACAGAAAACCCCTCCAAAACTCAACAA .....x.x.............xx...x.......:....xx:..:....:.....:.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 88962237 NA +4179 chr4 + 190214555 137343645 137343644 137343718 74 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGATGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:...........::........x.xx.x...x.:...........:..x.xx:.....:.. 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 61310441 NA +25707 chr4 + 190214555 137359434 137359433 137360331 898 TTTTAAAGCAATTTAGAAAAGTGCTGTAA---CTGCCTAAATTGAGAAGCTTAAAGT---AGAAGAACTCAAAGTGATTTACAGTCTAGAATTATTTGCAAAACTTTTAGAGTAAGATCAACTTTTAGAAGGCTGATGC-TCAATACATATTTTAAAGTTCTAAAGTATT----TTGTCAAACTAAAAAAGTACACTGGCAAACTGG--------GCAGTCAGTTTACTTAAGCTTGAAAATTCCATTTCACTCAAATTGGATACAGTAGTTAAGTAAAACAATGGGGCTTCTATTTTCTGCTACATATTATTTTTTTAAAAAAAAGTATACAAGAGCTGTCACATGAGCAGCCTGTTTGCCTACTCAGTGCAAAGTTTTATGTTTCTGAAAGGCCACCGCCCAC-ATCTCTTAATGCTGAAAATAAATCAGTTTCATCTGTTGGTTGTTTTATTTCTAGTGTTTT------TTTTTTCTTTCTTCCTGCTTCCTT-TTAGGCCAGTTTTCACAAAGCCATATGGCAGCTGAGAGAAG--CAAAGCAACACGCTGTATTTTCAGTTCTTAACAAAAGGGGCTGTGGTATCACAGCAGCCCATGAATACATGAGGCATGGTCATGTATAGA--AGGACCTCCAGCCCTGTCAGTGAAGGCTGCAAGGAAGGGTGATGGAGCTG------CTGCTGCTTAAACAAGAGAAATACTGAGTGCTTTCCTT----GCACATATCATTGGCATTTGCCTGCCTCCACATTTATTTCATCCCTTCCCAGACAGTTTG----ATGCCAAAATCCCATTAGCTATATTAATGACATATGGCTGGAGGTAGAAGTATGTGACCAGACAAGAAAAGCACAA-ATTGAGCATTCTTTCTATTCATTTCTGATATTTCTACTTAAAGACACAAGATTCCCAACAAAGATTGTGTCAG chr4 + 94230402 29703091 29703090 29704013 29703091 29703090 29704013 923 TTTTAAAGCAATTATATAAAGTGCTCTAATTGCTGCTTACTTTAGGAAGGGTTTAGCTCCACAAAAACGCAGACT-------AGACCAAAGCTATTTTGAGAGATTTCAGAGAAACACGCAGCAATGCCAAACAGTTGCACCTATGTAGCACTTGGGGTTTCATGGTTTTACCTTTTGCAGACAAGGAGGGAAAATAAGAAAGCTGGCAGCCGTCACAGTTGTTTCACTTTAGATGATGCATTCCATTTCATATAAATTTGTTACAGTAGTTACACAAAACAATGGTGCTTCTATTCTCAAGC-CATGTTATTTTTT------AACATATACCAGAGCTGTCAAACAGGCAGCTTGTTTGCCTGCACTGCAAGAAGGTTTTATATTCCAAAAGGCTTTCACCCCCTACTCCCTAATGGTGAAAATAAATCATTTTCATCTGCTGGTAGTTTCATTTCTTTTTCTCCCCCCAGTCCTTCCTTTTTTTCCACTTCCTTAGTGGGCCCCTTTCCACAATGCCATATGGCAGCTGAGGGAAGGGTAGAGCAATGATCTGCATTTTCAGCTCTTAACAAAAGATGCAATAGTGTCAAAGAGGCTCATGAATGCATGGGACACATACATGTATAGAGCAGTGCCTCCAGCTCTGTCAGGAAGGACTAAAGAGAAGCCCGATAAACCTGACATCACTTCAGCTTGAAGAAAGGCAGC----AGTGCTTTTCTCAGTAGTTCATCTCGCTCCCATCCATCT---CCCCCAGCTCCCTGCTCCCCTCCCACCCCTTTGGGTCCACGTCAAAATCCCATTAGCTCTATTAATGACATGTGGTTCGAAGCAAAAGCGTGTGGCAGAACAAGAAAGGCACAAGATCAACCGTTTTATCTATTCGTTTTTTATACATGTATCACGAGTTTGAAGTGTTTGAGGAGGGGCTGTGCCAG .............xx:x........x...---....:..xx..::....xx.xx..:---.x..:...x..:.x.-------..x.:.:.::.....xx.:.:x...:....x..x.:xx.x:xx.:xx.::.x.x...-:.x..::.xxx:..:::...::.x:..x..----..xx..:..x.::.::.x.x.:x:.x..:....--------:....::x..:....x..x.x:x:x...........:x:.....x.x...........x::..........x.........:..x:x:-...:.........------..x:.....x..........x.:::.....:.........:.x.x.::x:...x...xxxx...::......:x:.:...x.-.:::.:.....x.............x.........:....x....:......xx.x:.::------.::..:....:..:.::.......-x.:....xx...:.....x.................:....--:.:.....::xx...:........:............:x..x:.:..:...x..x:..:.......:....:.:..::xx..........--..x:........:.......x:.:.:..:x.::....xx:...::.x...------..x.x....:..x..::.x.::----........:..:----.:x...x..::.xx...::::..---:..x..x:.x::.xx....:.....xx.xx..x.----.:.:................x............:...:.x..:.:.:...::....:.x::........:......-..::.x.:..:.x.......:...:.x...:x.x..::xx:..x:xx...xx.::x.:x.::.::....:... 29M3I25M3I15M7D57M1I30M4I33M8I88M1D13M6D82M1I60M6I24M1I41M2I90M2I50M6I22M4D12M4I23M3D34M4I76M1I73M 588/877 67.0% 923/94230402 0.0% 67/877 7.6% 107656343 82558212 +9236 chr4 + 190214555 137359734 137359733 137360209 476 AAAAAAAGTATACAAGAGCTGTCACATGAGCAGCCTGTTTGCCTACTCAGTGCAAAGTTTTATGTTTCTGAAAGGC------------CACCGCCCACA---------TCTCTTAATGCTGAAAATAAATCAGTTTCATCTGTTGGTTGTTTTATTTCTAGTGTTTTTTTTTTCTTTCT-----------TCCTGCTTCCTTTT----AGGCCAGTTTTCACAAA-GCCATATGG-CAGCTGAGAGAAG--CAAAGCAACACGCTGTATTTTCAGTTCTTAACAAAAGGGGCTGTGGTATCACAGCAGCCCATGAATACATGAGGCATGGTCATGTATAGAAGGA--CCTCCAGCCCTGTCAGTGAAGG--CTGCAAGGAAGGGTGATGGAGCTG---------CTGCTGCTTAAACAAGAGAAATACTGAGTGCTTTCCTTGCACATATCATTGGCATTTGCCTGCCTCCACATTTATTTCATCCCTTCCCAGACAGTTTGATGCCAAAATCCCATTAGCTATATTAA chr4 + 94230402 29822253 29822252 29822733 29822253 29822252 29822733 481 AGAGCAAGCACAGCATGGCTGTCATCCGAACAGCCTGGTTGCCTGCTCGGGTGACGGTTTTCTATTCC---GAGGCATCCCCTCTCTCCACCAGTTGCAGTCACTTGCCCCCTTTGCTCTGAAAATAAATCAATTTCATCTGCCG-CAGTCCGATTTCT-----TTCTTCTCTCTGCCTCAGTCCCTCAGTCCCACTCCCCTCTTTGAAAGGCTCTTTCCACGGGCACCATATGGGCAGCTGGGAGAAGGGCAGAGCA-------GTGATCTAGCTCTTTAACAAAAGAGGCTGTGGTGTCAAAAAGCTTCATGAATGCATGAGACACATTCATGTATAGAAAAATGCCTCCAGCTCTGTCA-CGAAGGACCTAAAGAGAAGGCTGATAGGCCTGAACATTGGCTTTCGAGTTAAGAAAGGGCAGCAGT-----TTCTCTCTGCGGCT--------CATTCCCCTGGCCC----------TCCCCCCTCCCC---CAGTTTCATGGCAAAAATCC-----CTATAATAA .:.:x...:.:.xx.x:.......:x:..:.......x......:...:.xxx.x:.....x.:..:.---:....------------....:x:::..---------:.:...x::x..............:.........::.-:x..::x......-----..:..:.:...x:..-----------...::..:..:.:.----.:.x.xx...:...:::-:........-......:......--..:....-------..:x.:.x:x.::..........:.........:...x.:x:x::.......:......:..::x............::.--........:......-:.....--..:x.::.....x....:.:x...---------:.x.x:x....:x...:.x.::.x.-----:.:..::...:xx.--------....:x....x.:.----------..x:....:...---......x...x.....x:..-----.....x... 68M3D5M12I11M9I37M1D13M5D15M11I14M4I17M1I9M1I13M2I7M7D80M2I15M1D6M2I24M9I25M5D14M8D14M10D12M3D20M5D9M 298/428 69.6% 481/94230402 0.0% 101/428 23.6% 107537481 82677074 +3290 chr4 + 190214555 137365228 137365227 137365309 82 AAAAAAAAAAAA-----AAAAAAAAAGTTCTTTAGCAAAGGGAAAAACATCAGAAACTCAGATCTACATTAAAAAAAGGAAGAGCAT chr4 + 94230402 29410682 29410681 29410768 29410682 29410681 29410768 87 AAAAAGAAAGAACTATTAAAAGAACAATTATTTTGCAAAAGCAAAAACATCAGAAATCAAAAACTAAATACAGAAAAAAAAAAAGAT .....:...:..-----....:..x.:..x...x.....:.x..............::x.:.x...x..xx.:....::..:.:x.. 12M5I70M 59/82 72.0% 87/94230402 0.0% 5/82 6.1% 107954546 82260009 +6789 chr4 + 190214555 137370774 137370773 137370997 224 CTCACATAACTCTGCAAATAGCTATTCAATTCAAACTGTCTCAAGGGTAAAAGTATAAAGCTCAATGTTTCTGTTGGATTTAGTGGAGCTCATAGAGCGTCTGGATTTGTTGGTCATGGCATTCCCTCTTAAACCCTCAAGTGTCTGTTTGAGCCAGTTTATACC--AGAACAATTCAACAATTCAGGGTTTCCTTTTGTGTGTAGAAACATGTGTTTACACGGCT chr4 + 94230402 29704848 29704847 29705071 29704848 29704847 29705071 224 CTCAAATAATTCAGAAAATAACTGTTGACCTGCAATCGTCTCTAGGGCAGAAGTATAAAGTTGAGAGCTTCTATTGGATTTAGCTGCATTTGAAACCTGGCTGGATTTTCTGGTCACAGCAACAACTCTTTAAATCT--ATAACCAGTTGGAGTAGAACTGTAACAAAAAATAAGTGAGCTATTCAACACTTCTTTTTCTCTTCAGGAACATCTGTTTACATAGCT ....x....:..x.x.....:..:..x.x:.xx..::.....x....:.:..........:.x.:x.:....:..........:x.x::.::x.:xx:.x........x:......::...x:xx.....x..x:..--.xx::.x...x...:x::x:.:..x.--.:..:..x.x.:.x.....:x::...:....x.x.x:..:.....x........::... 137M2D26M2I59M 143/222 64.4% 224/94230402 0.0% 4/222 1.8% 107665926 82548629 +21626 chr4 + 190214555 137375137 137375136 137375716 580 TCAATTTAGTGT--TTTTAACAAAACATCAATTTTTAAAATTAGCTCCTCAAGATACA--GCTTTC-------ATGGAAGAGAATAGCCT-AAATGCCTGTCTTCC-TTTAATTGTTTGG-TTAGCCAGGGAAGAAGGAGGTACTACCATGAAGCGACATGCAAGTGAAGTTCATTGCCATGGTTAGTAATGTTTTCTGAGTGGTTAGTAATCACTGTTTTCTGAGGGCTATCTAGGGAAAAAATGAGATGGTGAAATTCACAGTGGTTTAAGTTTCTGTTAAAAAAAAAAAAAAACAAACTTTCTTTCAATGTATTTCCC---TTCTATGCCCTAATTTCATAGACCATGGTCAAAATTACAAGTTTGGCATCTCGAGTTTCTGGGGCTATAACAATTTTTCCC-AGCTAGTAGCAGATTCATTTCTGCTAAAATTCTATTACTCTAAGCTATTTCTCTCAAGGATTGTAACAATTCTTCTGAAAACAGATCAGCAGCTTTCAGTATAATCTGACTTCATCTAACTGGAACAAGGTCCACTTCTGGTAAATCCTGCAACTGAATGTGACAGGAATAGAAAACTCTATTTCAGTGCCT chr4 + 94230402 29706707 29706706 29707264 29706707 29706706 29707264 558 TTAATTTACTTTAATTTTCACAATGCCTCAGTCTTCAAGTTTAGTCCCTGAAGGTAAAATGCTTTCTGCAAAGCTGTAGCAGGGAAGCATGAAATATGTAGCTTCTACCTCATTGCTTGGATTAGTTGAGCTCAAGTGAGGCCTGAGCATGAGGTGACTTAAAAGAGAGGTTCATCGCCA-----------GCTCT-------------AATAACCACTTGATAAGAACTACCTGCAGAAGAG-TAAGATGGGGCAAATCACAGGGGGTTAAGTTTTGGATTAGAA--------------CTTTCTTTCAATGTATTTTCCCTCTTCTTAGCCATAATTTCATACACCAAGCTTGAAATTGCACGCATGGCACCTCAGGTCTATCTGGCTGTAGCAATTTTTTCCTAGCTACTAACAGATTCATTTCTGTTAAAATTCTATTACTCCCAGCTATTTCTCTCAAGGATTGTAACAATTCTTCTGAAAACAGATCAGCAGCTTG-GGTATAATCTTACTCCACATAACTGGAACAAGGACTGCTTCTAGTAAATCCTTCAACTAGATGTGACAAGAATAGAGAAATTATTTTCATTTCCT .:......x.x.--....x....x:.x...:.:..:..:x....::...x...:..x.--......-------x..x.:x..::x...x.-....::x.:x....:-::.x....:....-....::::.xxx:.:x....:x:x.x.....:.:...x.:x...x..:......:....-----------.:.:.-------------...x..:::..xx.:..::...:..:x:...:.:-.:......x.x..x......x..x........:x.x.x.:..--------------..................:..---....xx...x..........x....x.x.::.....:..x.:x.....:...::..:.x.xx....:..:........:..-.....x..:..............:................:x.....................................................x-:.........x...:..:x..............x.::.....:.........x.....::........:.......:..x.:xx.....x.x... 12M2I44M2I6M7I17M1I15M1I13M1I59M11D5M13D34M1D42M14D21M3I81M1I96M1D95M 405/540 75.0% 558/94230402 0.0% 58/540 10.7% 107668430 82546125 +3250 chr4 + 190214555 137389080 137389079 137389145 66 GTGGCACATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..:.--....:.:............:........x.xx.x...x.x........::.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 61355879 NA +6680 chr4 + 190214555 137393965 137393964 137394329 365 AAAGTGTATGGGTGCCTAATTCTGGAGATTACCTTTAATAGGAGGCAATGGGCAAACTAAATGTAAGTGGTGTGGTCAAGTCACAAAATAACAAGCCCATTGTATCAGAGATCCAGTTTGCTAC--TTGGACACTTGAGCATATAGTCCCTCTGAAGTTAGTATAATTGGTTCCAGCTGTTTAACTGTTGGGTTTTTTTTGGTTTTTTTTTTTGTTGTTTTTTTTTAGTTTTGAACAGGAGCCAACTTGGCTTGAAAGCTGTGCTACCAAAAAGAAG-AGACTGAAGAATGATGCCAATGTATATATATGTATTTCTTTCAAGCCATTT-TCCTGCAGCAGTTCATCTCAGGGCCACGATAATTCAAAC chr4 + 94230402 29716712 29716711 29717041 29716712 29716711 29717041 330 AGACTGTATGAACAC--AGTTCCAAAGATAAGATTAAACAGAAACAAATGGCTAAACACAACGCTAGCATTCCTGTCAAATTATTAAATAGCTAATTCATTAAACCACAGAGCCAAATTAGAAAAGCTGGCCATTTGTGCATGTAGACACACTGTAGTTAGGATAATTGGGACCAGCTGTTGTACTG-----------------------------------CTTTGCTTCTGGAAGGGATCCAAAAGTATTTGAAGGCAACGCCACAGCATGGAGGCAGACTGCTAAGTGCTGATAGTGTTTCTGCTTCCA--CCCTTCAAGCCCTTTCTCCTCAGGCAGTTTATCTGTCAGCCACAATGACTCAAGC .:.x......::::.--.:...:::....x.xx..x..:..:.:xx.....x:....xx..:.:x..::x.x:x.....:.:.:x.....:.x.:::....:x.:..x...x...:x..:xx.x--:...x..:...x....:...x.x.x...x......x........xx.........xx....-----------------------------------:...:x..:..:.x:...x....xxxx::.....:..x::..:..x:x.x:..:.-......xx:.:..x..x:.:...x.x.::x.x:.--:.:........x...-....xx:......:....xxx:.....:..:.:....:. 15M2D107M2I61M35D55M1I34M2D15M1I39M 205/326 62.9% 330/94230402 0.0% 43/326 13.2% 107677253 82537302 +3048 chr4 + 190214555 137394139 137394138 137394187 49 CTGTTTAACTGTTGGGTTTTTTTTGGTTTTTTTTTTTGTTGTTTTTTTT chr4 + 94230402 41855246 41855245 41855294 41855246 41855245 41855294 49 CTGTTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTT ......x.:.x.x...:.......x....x...x............... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 95538893 NA +3384 chr4 + 190214555 137394146 137394145 137394199 54 ACTGTTGGGTTTTTTTTGGTTTTTTTTTTTGTTGTTTTTTTTTAGTTT--TGAACA chr4 + 94230402 15130532 15130531 15130587 15130532 15130531 15130587 56 ATTGTTGGGTTTTTCTTGGTTTTTTTTTTTTTTTTTCCTTTCTAATTTGGTGAACA .:............:...............x..x..::...:..:...--...... 48M2I6M 46/54 85.2% 56/94230402 0.0% 2/54 3.7% 122263614 67950941 +3293 chr4 + 190214555 137395349 137395348 137395420 72 TATATATATATACACATATATAGTATATATATGTATGCATATATATGCGTATATGTATGTATATACGTATAT chr4 + 94230402 32744959 32744958 32745030 32744959 32744958 32745030 72 TATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT ...x...x......:x..:.x.:....x...::..:::.:.:.:.x.:..::....:.....:..:...... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 104650390 85564165 +3018 chr4 + 190214555 137395399 137395398 137395454 56 ATATGTATGTATATACGTATATATGTATATATTTGTGTGTATATATGTATATATTT chr4 + 94230402 6857610 6857609 6857665 6857610 6857609 6857665 56 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATT ....:..:...:.........x....:.:.:.:.......:.:.x..x.x...x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 130537789 59676766 +3076 chr4 + 190214555 137395434 137395433 137395488 55 TGTGTATATATGTATATATTTATGTGTGTGTGTGTGTGTGTGTATATACGTATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:..:.:x..x.:x..xx.............:..........::...:..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 110069932 80144623 +3147 chr4 + 190214555 137395446 137395445 137395501 56 TATATATTTATGTGTGTGTGTGTGTGTGTGTATATACGTATATATATATACATAAA chr4 + 94230402 85834533 85834532 85834588 85834533 85834532 85834588 56 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAA ...x:....:...x...................xx.:...x::...:...::.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 51560913 NA +3347 chr4 + 190214555 137397578 137397577 137397676 99 AATAAAATGATATAAATATTTTAT-TCTTTAATATGTTTCAGTGCTGTAATGTTTATCAAAGTCATTTCAATGCCATGACAATTCTGAAATTATTCTTTT chr4 + 94230402 43310180 43310179 43310279 43310180 43310179 43310279 100 AATCATCTGCTTCAAATAATTTACCTGTTTTCTTTCCCTCTGTACTATAATAGTTTTCCAAGTCATTTCAATGCAATAATAATTCAGAAGTTTTTCCATT ...x.xx..x.x:.....x....:-.x...xx.x.x::..x..:..:....:x..x..x...............x..:.:.....x...:..x...:x.. 24M1I75M 69/99 69.7% 100/94230402 0.0% 1/99 1.0% 94087398 NA +3261 chr4 + 190214555 137420410 137420409 137420469 60 TCTCAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAGTAAAAGAAAA chr4 + 94230402 72824136 72824135 72824195 72824136 72824135 72824195 60 TTTCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAA .:......:..:..................:x..:....x.x.:x:..x:.x........ 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 64596274 NA +3547 chr4 + 190214555 137445605 137445604 137445676 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACATGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x.x..x...x.:........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 61412399 NA +3356 chr4 + 190214555 137445721 137445720 137445787 67 ACTGTCTCAATTTAAAAAAAAAAAAAAAAAAGGGAATGGAGATAGGATTTGTTAACTAAATATAAGG chr4 + 94230402 33810302 33810301 33810368 33810302 33810301 33810368 67 ATTTTCTCATTTCAAAAAAAAAAAAAAAAAGGAGAAAGGAATTTGGATTAGTCAGTCAAATAAAGAG .:.x.....x..:.................:.:...x...:x.x.....x..:.:::.....x.::. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 103635419 86579136 +27754 chr4 + 190214555 137476293 137476292 137476966 674 GGAGTTAAGTGAGGTCCTGAGAAATGCCCATCTATATATTCTGAAGGCCTTTCAAATGATGCCAATAATTTACAGTCACTTAATAAC-----TGAAGATACCTGAACCAATGTTGACTAAAAACTCTGGCTTCCAGCTTTACTGAGTGTTCTGGGAGTTAATAGAGGTCTCTAGTATATGCAAAAGACACCCACAATTGAAACTCTGGGACACAGAAAAGAAGACCTTCAAAGTCTCATGAATTATATGCCAACTCAAGGCCCTTGTAGCGGCAGGCTAGCTCCTACTTAGAGGGATAAATCAAAGCATTAATCGGTCTTGTCGGGAAAGCAGGTGTTTTGACTGCCTTTATGGTTCATTTTCATGCAAAAGGGTTGT-GGGACACAGAAATCACAACGGATTGCAAATAAATGACACTGACAGGATTGATCCCACCAGGTGAGGGGGCTAAAATCAGCCCGTCTTTTCGTATTATGAAATATACCTAATAGCAGAGCCTCTTTAAGCTCTAGCTCCACAACAGCCTATTTGTGAGCTCAGGATTTTTTTCTTTT----------TTTCCCCTTGTCTTTTCT------------------------------------------TTTTATAATAAACTATTCCAGCAACCGTAGCAGGTTTAGAATGTTAAAGAACCATGGTGCGCAAGATTTGACAAAAGGATTTTTGTTTTTAAAGGACTTTAAGGACA chr4 + 94230402 29748249 29748248 29748973 29748249 29748248 29748973 725 GGAGCAGAGCAGGCTCCTCAGAAGCACGTGGCCCTGTGCTGGGGAG-CCTTCTGACTTAGCCTGCTAATTTACTGCCACTTAATAACAGGAGTGGAGAAACTCGACCCGACTTTGCTGGAAAAGGCCGGTCTCCAGCTGGGGTGGGTGTTCTCAGAGTAGGCCAAACTTTCTAGCAGGTACAAAAGAAGCCCGCAGCTGAACTGCAGGGCTGCAGAAAGGA-GACCTTCAGCCTGCCATGAATTACACACCCGCGCCAG--CCCTGCAGCAGCCGCCCAGCTCTGCCTTGGAAGGATAAATCAAAGCTTTAATCGGGCCTGTCAGCAAAGCAGGTGTTTTGACTGCCTTTATGGTTCATTTTTATGCAAAAGAGTTGTAGGGATACAGAAATCATGGGGGATTGAAAATAAATGACACTGACAGCACCGATCCCACCAGGCGAGGGGGCCAAATTCAGTCTGTCTTTTCATATTATGAAATATACCTAACGGCCGG--CTCTTTAAACCCGGGTTACACAATGCACTGTCTGTGCACCCTGGACTTCTTTTTTTTCACCCCTCCCTTTCCCCCTATTCTTTTTTATTTCCCCTCCATGTGATATGCCAGGGGCTCTTTTCTATTCTTTGGTGATGAACTGCCCCAACAGCCATGGCAGTTTCAGAATGTTAAAGAGCCGCCGCTCGCCCGAGCTGACAAAAGGA-TCCTGTGTTATGAGAGCTTAAAGGACA ....:x:..:::.x....x....:::.x::x.:x.:.::.xx.:..-....:::.x.x.xx.::x........x.:...........-----..:...x..::..x..:.:x...x:x:....xx.:..::.......xx:x..:.......x:....x:::x:.:x.:.....:.x:.:.......x:...:..::....x:x.x...x::......:..-........:xx.x:.........:.::..x:.x.x..--..:..:...:..x.x.:.....:xx...:..:..............x........x.:....:.x....................................:.........:.....-....:..........:::x......x...................x.::............:........:...x....:.:........:...................::..x.:--........:.:.x:.:.x.....::xx..:.:....x:.:.x...:..:...:....----------.......:.:.::...:.------------------------------------------...x:.:..:....:::...:..:..:.:....x..:.............:..::x.:x...xx..x:...........-.::...x..xx:..::...x....... 46M1D40M5I129M1D37M2D117M1I117M2D57M10I18M42I79M1D27M 477/667 71.5% 725/94230402 0.0% 65/667 9.7% 107728044 82486511 +3288 chr4 + 190214555 137507029 137507028 137507083 55 TATGTGTGTATGTATATATGTGTGTGTGTATATTTATATACACACACACA-AATAT chr4 + 94230402 44815600 44815599 44815655 44815600 44815599 44815655 56 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACAATAT .........:::..:.....x:...........:.:.x......:.....-..... 50M1I5M 45/55 81.8% 56/94230402 0.0% 1/55 1.8% 92691429 NA +3739 chr4 + 190214555 137511539 137511538 137511617 79 GTTGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.....:.--......:...........::........x.xx.x...x..........::.:..x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 61478338 NA +57664 chr4 + 190214555 137520556 137520555 137521722 1167 TTAATGATTCTTAATTTCTAAAAAGT--TATTGAAAAAAAGTG--GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTG-----GGGTTGTTCATACAACATAATAATTCTTCCCCAACAAAACTAATCT----AAGCAGTGCCT-----------------TTACA---CTTTGTGGTT-GAATAGTGTATCAGATTTGAACAG--TGGC-TAGTTTCTACACGACTAGGAAAAACATGTCTGTCATGGGAGTAAAAAAATAAAATTTGTTTGTTAAATTACACATAAATATAAGGTACAAATGTATTTTTAAAATACAGATTAAAATAATCACACTTGCATTGTGTACATACGAAAATACAGTATTT-AATATTCAATATACACAGACACATTTATGATAAATGCAACTATTTGGCAATGCCAGTTCTTTCAGGGTTTTTTGTTGTTGTTGTTGTTCCCTAT----------TTCCATATACATGGAAACAAAAATGCTTCGCTAAAATCTCCTAGCTCTGGCGGACATCTTGAAGCAGTTTGTTAATCTCTGCCACCAGTTCACTGGCATCCATGAGTTCGTGTTTCCCATCATTGAGGTGGTTGAGCACATTGTCAAAATCATCTTCCTCATAATTTTCAGGGATCTCCTCCATGGCTGGCAGCCATTTTGAAGAAGGCTGCACACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTGGTGGTGGGATTTTGAAAATGCGTACTGGCTGCCCATGCCGCTACCCCCTGTGGGTAACCCACAGTTTTGGCTGGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTGGACCGATCCACCTCACTGCATTCAGAATAGGTGTCCAGGGAAGGCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTCATCCTCAAGACT------CTGATGTGGATGCTGCTGCTGGGGTTGCGTTGGGAATTCTTCCCCTGGAATGAACATGTTACTCCTATAATCAGAAGACGGTGAGGGCAGTGGTGGCATCCAGCACTGGTCAGAGTGTCCCAGGACCCTGCACTCCTCCGTGCAGAGTCTCATAGCTGCACTCAAGAAAAACAGTGGGGAT chr4 + 94230402 29770418 29770417 29771612 29770418 29770417 29771612 1195 TTGACAACTCTTTATTATAAGAAAGAAACATTGCAACAAGGTGTTGGATCAGTTATTAAAACTAATGCTTGGATAAGGTTTCAGTGATATGGATTTGGTTTTGTAACAT-----TTGAGACTTAAAAGAAATAATAATGGAAAGCAGTGACTCCCCTTCTTTTGTTATTTTACATGCCTGTGTGGCAAGAATGGTGGGT--GTTTTGACAAGGATGGTACCATCTATATACATTTAGGAAAA-CATGCTTGCTGTGGGTGTAGAAAAATAAAATTTATTTGTTAAATTACACATAAATATAAGGTACAAATGTATTTTTAAAATACAGAT------AATCACACTTGCATTGTGTACATATGAAAATACAGTATTTTAATATTCAACATACACGGACACATTTATGATAAATGCAACTCATTGGCAATGCCAGTTCTCCTCAGTCTGTTTTTTGTTCTATTTATTTTCTTTCTTTCCAGTTTTCCATAAACATGGAAA--AATAGGCTT---TTGAAACATTTAGTTCTGCCGGACATCTTGCAGCAGCTTGTTAATTTCTGCCACCAGCTCACTGGCATCCATGAGTTCATGTTTACCGTCACTGAGGTGATTGAGTACATTGTCAAAATCATCTTCTTCATAATTCTCCGGGATTTCCTCCATGGCTGGCAGCCATTTAGAGGAAGGCTGTGCACTTGAGTGAGTCCCCAGAGTTGGCCCA---TTGTTGGCTGGATTTTGGAAATGCGTGCTGGCTGCCCAGGCAGCCACTCCCTGTGGATAATTCACAGCCTTGGCAGGCAAATGTCCCTTCCTGCGCTCCAATGAATTCAAGCGATCCATCTCATTGCATTCTGTGTAGGCATCTAGCGAGGGAGGCAGCAGGCGCTGGAAGACGCTGCTCATTTCAGAGAGAAGAGAGGAGGTACAAGTGTCTCCTGATTCCTCCTCACCCTGACAGTCTTTGCCAAACGTTGAAAAGCTCTTCTTCTTTTCACTGGTGTCAGCAGGCTGTGGATCTTCCTCGAGGCCctgctgctgctgttgctgcagctgctgctgttgTGACTGAAACTCCTCCCCAGGGATGAACATGTTACTCCTGTAATCGGATGAGGGAGATGGCAACGGTGGCATCCAGCACTGGTCAGAGTGGCCTAGAACCCTGCATTCCTCCGTGCACAGACGCATTGCTA----CAAGAAAAAAGATGAGAGT ..:.::.:....x...x:x.:....x--:....x..x..:...--......x...x.::..:...x:x...x....x.:.......-----.:x...x.:x.::.....-----..xxxx.::..x.:..x....xx----........x..-----------------.....---..x.....:x-....:...x:.--.x.....xx..--...:-:x:.:.x..:..:x:........-....::..:::....x...:.............:.....................................................------........................:...............-.........:......:........................xx.................:::x:.x:.x...x.....x.xx..:..::..x.----------.......x.........--..x.x....---.x:..x.x::...:....x...........x.....:........:...........:....................:.....x..:...:.......:.....:....................:........:..x.....:.......................x..:........::....x........:..x..x.x:......---...x...:x........:........:...........x..x..:..:........:...::.....::.....x.....:x..................:x..:..x:.x.......:....:.......x.x:....::..:..x..:..x..:.:x..:........x..:...........x.....x.....x..x..:.x:..:..:..x.xx.....x..::::x.:x....:..x.....x..x.....:................:..x:..x........x.x:..x.....:..:.:------...x...x.x...x.......xx....:.x:x.:..:..:.....x..:.................:.....:..x..x..x..x....::..........................x..:..:........:...........x..x.x...x...:----.........x::..:.::. 26M2I15M2I41M5I18M5D23M4I11M17I5M3I10M1I11M2D11M2I4M1I23M1D87M6D40M1I94M10I17M2D9M3D211M3D308M6I158M4D19M 900/1141 78.9% 1195/94230402 0.0% 80/1141 7.0% 107750138 82464417 +3150 chr4 + 190214555 137521633 137521632 137521696 64 GGTGGCATCCAGCACTGGTCAGAGTGTCCCAGGACCCTGCACTCCTCCGTGCAGAGTCTCATAG chr4 + 94230402 6605087 6605086 6605149 6605087 6605086 6605149 63 GGTGGCATCCAGCAGTTGTCAGAATGGCCCAGGATGAGACATTCCTGTGTGCAG-GTTTCAGAG ..............x.x......:..x.......:xxx:..:....x:......-..:...x.. 54M1D9M 49/63 77.8% 63/94230402 0.0% 1/63 1.6% 130916546 59298009 +164964 chr4 + 190214555 137528436 137528435 137532268 3833 GGTAGACCTGAAAATAAA--GATTTTCTATCACTACCCTCTTACCTGCTGGAATTCTTCCATCTGTGAGAAACAGGTCGCTGAATCCTTCACCCAACAGCCTATCTATTGGAGAATCTCGCCCCAAATCATAATCACTGTCTCCTGCCTCACTGTCACCACGGCCACTGTCTTTCAAGCTAAATTTGTCCATGTCTTGAAGGGCATATCTGGAAAGATAA--------ATCACAAAAAAAAATTACAGTTTTTACTCTTCAG----------CATT--TATGTTGAAACTTAATAGGTA-ACA-CAAGAATA-----ATTCATACCTGTAGCTCCTGGAATATTTGTTTCCTCGAAAACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATTGAAAGAAGCTGAGAGACCTGCTGGAAACCAAATAGACAGAACTGATTCCCGGAAACAAGCCTCCAAACACTCACAATCTTTAAGCAAGAAAAACAGTTGCTTGCT-ATTTCAACTAAGTAATTGAATATATTCTCTCTATTTAAAAGATT----------------TGCAAATGCTGGAC----TGTGGCGGACCAC------GCAGCCAGCTACCAACTATAACTAAAATATATCTCAGA-----GAGAT---------TTGGATGACCT------------------AATACAACTGACT---------------TTTACTTTGTGAAAGAAGACTCCCTTTCAAATAACTGATTTATTTTCTTTATAATTCA--GACA-AAGTGACCACCTGTAAAAATACATGGAAAATACTGTAAAATACAACACTGCAATGCATGTAGTTTAAA---AAATGTCAGGAAATCTTCCAAACTTGGA------------------CAAACATAGCATGCATTGAAATAGAAGT--CTGAA-GGCCTCAGTTTTTTTATTTGTTCAGTAAAGACTATAACCTTGAAAATAAAGCAAGTCTCTACTTTTTGGCTTCCCATTATTTTAATCTGG-----------------------GAAGCAAGGGGACTCTAATTACATAGTCCTTTGTGACCTTCACATTTATTTTTCAATATTACACATATTATATGAAGTTATTTA--CTTAAGG----------AAAACTAAAAACAGTATGCTAAAGTGTGCATCTTTGCTACATATTCACAATGTAACTTGTATCCTACTTAATTTGCACAGTATTAGTATT-----GTTACTTATTAATGAAAACATTTAAGAACTAG------------TAAACACAATTCCTGAACACT----AACACCTAACATTGCAATGAATTGATGCGGTTTATGATCTTACCTCAACAGCAGGAGTGGCGTGGGTGAGTTCTAATGAGAAATTCTCTGGCACGTGGTTTGATGAGATTGTCACCAAACTGTTGAGTGACTGGTGACTGTTGTGACTCTGCCGGCTGCCCATCTGCCCTCTTTCTAAGGTAGGAGATGAAGATGGAGACGATCTGTGATGAGATCTGATGGGCAGAGTGCCATTTATGGTAGGCACCAATGTGATGTCCCCTTTGTGAATCTGCCGGGATGGCCTTTTTGGGTGGTGCTGGTAAGTTGATTCGGCCACCCTGCAGTTATAGGATCTAGTGTCTTTCTTCTCGCGGTTACACCTAGTTGCAAATAGCACCATAATAACCAGCAACACTGCACAAATTGCTCCTAAGGAAATAATTATTATCATGGAGACATCCAAGGATGCCTGGCTTACTGAAGTCATTGCTGTACTTGTCACCGACTCTGCATATTCAAAGATCATGCACTTCAGAAGGACTTTGGTATGTAGCTGAGGATTGCCTTTGTCCTGAATGATAACTGACAGCTCCCATTCTGTGTAGGGAACAGAATCCATGCTAACGTTGGTATGGATGTCACATGATCGTGGATCAATTATGAAGATATTCTCCTCATTACCTGCTACTATGGCGCAGCTGAGTTCAGCATTCACACCAGAGTCTCTGTCAATTGCCCTTATTCTTGTGACATGAAAGCCACTTTCAGCCCCTTTGGGAATGGTGATTTCTGCCGTATTATTACGCAATGCAGGCCCTATAACCACAGGAACGTTGTCATTTTCGTCAATGATGGTGAGCACAACTGTGGTATTGCTTACCAGTTGCTTCGGGCTTCCTCCATCTCTTGCTTCTACCACAAAAGTGATCTGACTCACTTCTTCATGATCAAAGATTCTGAGGGCATAGATGGCTCCATTAGATGGGTCAATGGTTACATATGTAGTTATGGAACTTCCTAGAATAAAACTCTCCAAGATGGTGTATGTCACTTGCCCATTTTCTCCAAGATCAGGATCTGTGGCTGTAACAGTGGTGATATATGCCCCTGGTGAGTTATTTTCTGAAATTACAAATTCATATCGGCTTCTCTGGAAGTGGGGTGGATTGTCATTGATATCATTGATTTGAACTGTAAAATGTTTCACTGTAGAGAGACTGGGTGTCCCCCTGTCCTCAGCGATTACAGTCAAACTATACTCAGATCTCTTTTCTCTATCCAGTGTGGCATTAGTTAAGATTAAATAATTGTTTTCATATGTCTTCTGAAGTTTAAAGTGACCATGTCCATGAAGCTTACAAACTATTTCTCCATTCAGCCCAGAATCCTTGTCCTGAACTCTGACCAAAGCAACAAATGTATCAATAGGATCCCCTTCAAAAATATAAGATATTTCTTCTTTTCCAGGGGACATGAGGTTGATGTTAATTTCAGGTTTATTGTCATTAACATCCACAACCTTAATTATAATTTTGCAATGGGCTGGGATTGAATTTGGACCCAAATCTTGAGCCTGAACATCAATCTCATAGGATTTGGTGATTTCATAATCCACTTGCTTGAAAAGAGTCAAATGTCCTCTTTCAGAATCAATTTTAAAAGTCTCCATAATTTTGGGAGACACATGACTGCTGAAGGAATATACAATTTTCCCATTAGCGCCCTCATCTGGATCCGTGGCATTCAGATCTAAGAGCAAAGTGCCAACCGGGGAGTTTTCTAAGAGTTGTATTATATAAGATTGCTGCTCAAAAGCAGGGCTGTTGTCATTGGAGTCTGAAATGCTTATTTTTAGTATGGATGAGCCAGACCTCTGAGGTACTCCCATGTCTGAGGCAGTGAGCTGAAGCTCGTAGCTTGACTTCAGCTCCCGATCTAACTCTCTGACCACTATGAGTTCTGCATACTTGGCTCCATCAGTCCTGGTCCGAACCTCGATATTAAAAAAATCATTGGCAGAGAGCGAGTATGTGTGGAGGGAATTTTCCCCAACATCTGGATCAAATGCACTGTCCAGGGGAATGCGAGTCCCAACTGCTGCACTCTCAGATATCTCAATAGGTATGAGAGATCTTGAAAACTGGGGAGAATTGTCATTAATATCCAGCACTTCAACTTCAATATGGAAAAGCTGCAGATGCTCTGTGGGTAGAGTGATCACATCAAACTCTATGGAACAGTTCAAGTTTTTCTGGCACAGTTGTTCACGGTCAATTGTAGCCCCTATGCTGATTTCCCCATTATCCTCGTTTACTACAAGTAGAGGAGAATTTCCCCTCTGCATGGCTCGAAATCGAACAGTAGAAGGATTAGGAAGCTTCAATAAAACATCAGCCACATCCTCTGATAGTCTTGCAATTACTGATCCAACCCTCTGTTCCTCATAAATCCTGTATTTCAAATTCTTGCCCAGTACATCGTGGTTGAAAGATACTATCAGAAGTGCAAAAACAAACCTAAAGTGCATTTTAGCATTCATTTGGTGCATTGGTCAGTTTATGAGATTTCCCTCACAGAGCAAGTTAAAACAGCAAAGCAATTGCCTCAACTTCCTTTGGCAACGTAAAGC-----TACATTTGGTACTTGAAACTTGAAAGCGTCTCTTAATAACACAGCACAGCAATTAACAGCTC---------GCAAACTTTTGTTTTATACACACCGTGTCACGACTTC chr4 + 94230402 29776248 29776247 29780164 29776248 29776247 29780164 3917 GGCAGCACTGTAAATAAACCGTTCAGCTTCCATTGTGCTCATACCTGCAGGAATTCTCCCATCTGTAAGGAAAAGGTCACTGAATCCTTCCCCAAGAAGTCTGTCAATTGGAGACTCTCTACCCAAATCATAATCGCTGTCTCCAGCTTCGCTATCACCCCGGCCACTGTCTTTCAGGCTGAATTTATCCATATCTTGAAGGGCATATCTGTAAAGAGAACGGTGGTAATGGTGGAATCAAATTATCTCGTGTACTACTTGGATTAAAAATACACTAGTATATTG---TTTGATACACATACAGCAACAATATTCAGATCCTTACCTATAGCTTCTGGAATATTTGTTTCCTCGAAAACTTGGCCTTGGTTGATACTGGCCCTGGTGAAGCATTGAGAGAAGTTGAGAAACCTGCTAAAGAGAAGGTGAAAATAA-TGATTCCTTGAAATAGAAGCTCAGAC--TCCTAGTTCT---------AAAACTACTACTAATTCATTTCAA----------GTTTTTTTTTTTTCCCTTTTCAAGTTTAACTAAATCAAATTCCTACACATACATAACGCAGTACAACTGACTATTAGTGTAGAGTCTGCCACACAAAATAGCTGAAG-ACATTTCAGAATGAGGAAATGTACTGCTGTTTGTTAGCCTCGGAATTCATTAACAAGTAAAACAAGTAATTAAGCAGAGGTTGCATTTTGCTTTGT--------------TTTAATAGATTAGAGACACCCCCTTTCCATTCCACAGTCATAAATCACTAGGTGTAATGAGGTATGGCACTCATTTAAGGCCATTACAC--CAAAGC-TGCAGGAAAAAGTGAAATGTGCGG-----TCCCAAAGTTTGGGACACTGTGTGCAGATATCAGACACACACTGCCTTAGAATACATGTACCTAAACTGTGTCAGTGTTTAAACTTGT------AGTTTTCCACCCCCATTAATAAATTTCCTCTGTTCTTCTGGACTCT------TTCTAAAACAGCTACACAGAGGAAAAGTGAAGGCAAGGCAGGAGGAAGCTTCGTACACAGGAATCTGC----------TCTGGTTT---ACGTTACAC--------TGCATTGTTTCAGCCTTACGGGGAAGATCCAAGAACTAACACTATTAGGAACAGATGTAACCCTGTGGTA-ATG-----GATCCAGTTGCTATTGAAGTAAAGCTGCAAAGCTGTAACATTTAAGGGGAAATCTGTAACGCATGGGACTAAGATCTAACTGCCTGCTGCATGAAAAGCACCCCCATTCTCCCAAGAGGACCTGTGAGTGCAAAGCAAAG-------TGAGGACCTTACCTCAACAGCTGGAGTTGCATGGGTGAGCTCCAGTGAGAAGTTCTCAGGCACGTGGTTGGAGGAGATTGTCACCAGGCTGTTCAGCGATTGGTGGCTGTGGTGGCTCTGCCGGCTGCTCATCTGTCCTCTCTCCAGGGTCGGGGATGAGGACGGGGAAGCTCTGTGGTGGGATCGGATGGGTAGCGTGCCATTAACTGTTGGCACCAATGTGATGTCCCCTTTGTGGATCTGTCTGGAGGGCCTCTTCGGGTGGTGCTGGTAGGTCGATTCTGCCACACGGCAGTTGTAGGACCTGGTGTCCTTTTTCTCTCGATTACACCTCGTAGCAAAGATAACCATGATGACCAGCAAAACGGCACATATTGATCCTAAGGATATAATTGTTATCATCGAGACATCCAGAGAGGGTTGGCTTACCAAAGTAGCTTCTGTGCTTGAAAATGAATAAACATACTCAAAAACTGTACACTTCAGAAGCGCTTTAGTACTAAGCTGAGGACTGCCTTTATCCTGGACTATGACATAAAACTCCCAGTGCTTAGCTGGAACCGATTCTACACTCACATTGATGGAGATGTCACAAGTTTTGGGATCCATCACAAAGATGCTGTTTTCCTTGTCAGCTGCTATGGAGCAGCTGAGTTCAGAGTTCATACCAGAGTCTCTATCTGTAGCCCTTATCCTCGTGACAAGAAAGCCAATCCCAGCATCTTTAGGGATTGAGATTTCCGCCGTGCTGTTGTGCAGTGCTGGGCCCACGATGACAGGAGCATTGTCATTTTCATCAATGATGGTTAGTACCACTGTGGTGTTACTAACAAGTTGCT---GGCTCCCTCCATCCCTGGCTTGTACCATAAAGACAATCTGATTTACCTCTTCATGGTCAAAAGTTCTCAAGGCGTAGATTGCCCCATTGGAGGGATCAATGGTCACATAGGTGGTTATAGAACTTCCCAAAACAGAGGTCTCCAGTATAGTGTAGGTAACCTGCCCATTGTCCCCTAGATCTGGGTCTGTGGCCGTGACGGATGTGATGTACGCTCCCGGAGAGTTATTTTCTAAGATAACTACTTCGTATCTGTTTGTCTGGAAGCGCGGTGGGTTGTCATTTTCATCACTGATTTGGACAGTAAAGTGTTTTACCGTGGAGAGACTTGGCGTTCCCTTGTCCTCTGCTATTACAGTCAAGCTGTATTCAGATCTCTTTTCTCTATCTAGACTGGCATTAGTCAAGATTAAATAGTTATTTTCGTAAGTCTTTTGCAGTTTAAAGTGGCCATGACCATGGAGCTTGCAAACTACCTCTCCGTTTACACCCGAGTCCTTGTCCTGCACCCTGACCAGGGCAACAAACGTGTCCAGGGGGGACCCCTCAGAAATGTAAGCCGTCTCTTCTTTTTCTGGGGACATCAAATTTAAGCTAATTTCGGGTCTGTTATCATTCACATCCACAATTTTAATTATAATTTTGCAGTGAGCTGGAATAGAATTTGGTCCCATGTCTTGAGCCTGAGCATCAATTTCATAGGACTTGGTAATTTCATAGTCCACTTGCTTCAGGAGGGTCAGATGTCCTTTCTCCGAATCTATCCTGAAAGTCTCCATAATTTTGGGAGACACATGACTGCTAAAGGAGTACACGACCTTCCCATTAGCGCCCTCATCTGGGTCGGTCGCATTGAGGTCTATGAGCAAAGTCCCAACTGGGGAGTTTTCCAGGAGTTGAATTATATAGGACTGCTGCTCAAAAGCAGGGCTGTTGTCGTTGGAGTCAGAAATGCTGATTTTCAGGAGGGACGACCCAGACTTCTGCGGCACCCCCTTATCGGAAGCGGTGAGCTGGAGCTCGTAACTCGACTTCAGCTCCCTGTCCAGCTCCCTCACCACGATAAGCTCTGCATACTTGGCACCGTCAGTCCTCGTCCTCACCTCGATGCTGAAAAAATCATTGTCGGAAAGGGAGTAAGTGTGCAGGGAGTTGTCCCCCACATCTGGGTCAAAAGCACTGTCCAGGGGGATGCGGGTGCCCACCGCCGCGCTCTCAGATATTTCGATGGGGATGAGAGCCCTGGCAAACTGGGGGGAGTTGTCGTTGATGTCCAGCACCTCCACTTCCACATGGAAGAGCTGCAGATGGTCGGTGGGCAGGGTGATCACGTCGAACTCGATGGAGCAGTTCAAGTTCTTCTGGCAGAGTTGCTCCCGGTCGATCTTAGCGCCGATGCTGATCTCCCCGTTATCCTCGCGGACGACGAGCAGCGGGGAGTTCCCCCTCTGCATGGCTCGGAAGCGGACCGAGGCGGGGTTGGGGATTTTCAATAGAACATCGGCCACGTCCTCCGCCAGCCTGGCAATGACCAAGCCGACCTGCTGCTCCTCGTAAATCCGGTACTTCAGGTTCTTGCCCAGCACAGCCTTATCGAGAGACGCAACCGCCAGTGCAAAAAGGAACAGAAAGTGCATTTTGCTGCCAGCCTGCCGCGTTTGTAAGTTTCTGCAATTCATTTCTCCCAGCGAGTTAA------GAAGCAATTACTCAAACTTCCTCCGGTACCTCAAACCCCGCGCACATCTGCTCCTTCCAGC-------CGCCTCTC-ACAAC-CAGCCCGGC-ATCGACAGCGCAGTAGATGAGAAAACTT---TTCCATACACACCGTGCCGGGACATC ..:..xx...x.......--.x.:xx..x:..:.::x...x.......x........:........:..:..x.....:...........x..x.:x..:..:..x........x....xx..............:........x..:..:..:.....x................:...:.....:.....:..................x.....x..--------..x::::..xx......:xx:x.x....x:.::.----------..:.--...:...---:..:...x::.-...-...x....-----..:.x.....:.....:.............................:.....:.....:..x.................:.....:.....:.......::.:.xx.::.::.x.x..-.......:x....:.::xx::..:..--..x:.:.::.---------.....x::.:..x::.-.......----------.xx.x.x..:.:..:x...xx...x..----------------.:..x..:.xx:..----.::::.x...:.:------:x..:.x..:..xx.xx...:..:..:-.:..:.....-----..:..---------..x.x.::...------------------..x....x.:.:.---------------...:......--------------...x.x.x.x:x..xx:.::::....x:.x.:..--.x..-..:.x..:.xx.....x:.x::....x.xx:.:.xx.::x:.:x....--...x..-..:..xxx...---......xx..-----.:.....x..x.:------------------..:...:.xxx...x..::....x.x..--..:..-x.:x.....x...xx.:....------.:xx:.x:.x..:::xx......x:xxx...x.x...:.x.:..::------..:...xx::.-----------------------:.:...:.:...xx..xxx....:..xxx.:..:----------.:.:x...---.::......--------..x.x.xx..:.--....x..----------.:......x.x:.x..x.xxx.::...:xx:..x..x..-..:-----:..x:.::.xx...:xx.x.x..x:....x..:xx..::...-----.xx.x.:xx...:.x.x:x:x:.....x...:------------.:..x.xx.::..::xx.x.:----.:x....:xx.x.....x.x.xx.-------.x.x..:..............x.....x..:........:..:.:......:.....x...........x..x.............::.....x..:..:.....:....x...:.............:......:.....:..:.:...x..:.....:..:..:..x.x......:..:....x......:..x........x.:x..x..........................:.....:.x...x.....:..:..............:..:.....x.....x.x......:.....:..:.....:..:.....x..:........x..x.....x.xx.....:..:........x..x.....x....x.........x......:.......x..........::..x.x:........::....x::.x....:....xx.x:..x.xx:....:.....:.:::.:...........x:....:...:xx.........:.......:.....:.:x..:..xx.x.:......x.x:x.:xxx.....x..x..:.::..x..:...:.:x:.........x.x.:xx.....x..:.::.....::.x.::..x..::.x...:......x..............x:....:............:..x:.x........:..:......x........x.::....x:....:..:..x.x......:.....::.:..::...:...x..x..:.::.:x......:.:...........:...........x..:..x........:..:..x..x.......---....:........:..x....x.....:...::::......:.:..:........:.....::....x.:...:.....x..:.....:..x..:........:.....x..:.....:........:.:..:.:.:x......:x..:.....x..x..:........x..:..x.....x..:........:..:..:.xx.....:..:..:..:..x............:.:..x..x.x...:....x.:..x........:.x.....:........xx:....:.......:..x.....:.....:..:..:........x..:..:...:.......x..x...........:..:..:....................:..xx..........:...........:..:.....:..x.....:..x...........:.....x.....:.....:.......::.....:..:.xx..x..:...........x..:.......::........:..:..x.x:..:xx...:...:....:....x::.:.........:.x........x.::..x.x.:.......:...:.:..:.....x..........::.................:..:.....:..x........x....x:............:.......:........:.....:........:...........x.::..:....:.......:.:..x.....x..::.:...................................:.....:..:..:.::.......................:..x..x.....x..:....x.........x.....:...........:.:......x........:..:..........................:........x........x.....:..x.x...:..x......:....x..:..:...x.:..x..:..:........:........:..:.............x:..:.:...:..x.....x..:..:..............x..:........x....xx........::.:............x.:..:..x.....x.....x.....:..x.....x........:.....x..............:.....:..x..x..:..:..:...........:..:..:..x.......x:..x.x.........:..:.....:..:..:........:..x.....x.:......:...........x..x.....:..:........:..:.....x.....:...........:........x.....:..x.....:..:x....x..x........:.....:.........:xx..x..:..:..x..:..:..:.................:..x..:..x.x:.x:..:..:..:.x:.......:......:.....:.....:.x:..:..x.....x..::.x..:...:x...:.....:.......x...:....::...........:...x.x.x:.:..:...::.x.:.:xx..........x:...xx............:x::::x:::..x:..:..x..x.....x..x:...:x::..x.xx...:......------:........:.::x........::..:.x.x:...x.-----:....:..x.x...xx.:.-------..:....:-.:...-....x.:..-..::.....x.---------.x......---..::............:.:x...x.. 18M2I200M8I34M10I4M2I7M3D11M1I3M1I8M5I118M1D26M2D10M9D16M1I7M10D27M16I14M4I13M6I27M1D10M5I5M9I11M18I13M15I10M14D34M2I4M1I48M2D6M1D11M3I10M5D13M18I28M2I5M1I21M6D46M6D11M23I34M10D8M3D9M8D12M2I7M10I39M1D3M5D42M5I32M12I21M4I24M7D839M3D1695M6D37M5I19M7D8M1D5M1D9M1D11M9I8M3D26M 2760/3717 74.3% 3917/94230402 0.0% 316/3717 8.5% 107752188 82462367 +45757 chr4 + 190214555 137533634 137533633 137535306 1673 GAGGCTTGTGCTCTATCCAGGTCACAGAAACTGATACGGTATTCTTATTTGAAAATATGATTATTTATGATGTTCTTTCTGCTCTGCAATTCCTTTTAAGTTTATCATCGTGGCTCC---ATTTTTGCTGCTTTTTTTCATACCTTTTTCCTTATTCCTCAGCTGTCTTCATCCGCTTGCATATTTGCTGTTTCACAGAATGTCA-------------TTGTCACTTTTTTCCATTTATTTTTTCTCACTGTCTATTTTGCCC------CCCAGAAACATATAAAAAAAGTAATTTTCTGATTTTTCCACTTTGCTTACTCTCAGCAGAGCTCAGCTAAAGTCACTAAGAAGGCTCTTTCCAAAAAAGAAAGCAGAGGAGTCTCAGCGTGAATTCTCCTTCTTTTTAGGCATTCAAAAGCATTTTATAAGCCATTGTCTTTTTTTCCCCCTCCTGAAATCAGTGCTGTGTGGCAAATTGTGCAGAATAGAAATGCCTATAATGAATGTATTTAGTACTGGGTCACGCTGATGAACATTCTGCCCCCATGAATAATACTGTTTTACAAGTTTGTAGCCCTTTCAAATTGCTGATCCCCAAACCCTATAGGCAAACTAGGAAAACTACCACAAGCAAGGGGGACTTTAGAAACCCATAGCCATCTGGCCTAGATCTCTAACAATCTGAGCCAATAATTATATCAATTCAGGCTTTAGCGAACCCCTTTGCAAACACCAAAAGAGCAAAGAAAGGAATTAGTGACTATTCAAAGTT---GGGGTGAGAATTCAAAGGTAACCTAATTCCATTAGTTCTAGGAAAA--TTTTCTTTCAGAATTTGATAAGTCTACCCCCCA--------AAAAACTTCA--------------------------AGAGCAATCGATTTGATTACCTTGATACGGATTTTTTTTATGCTTAAAAAGTA----------AAAATAATAAAAAGCTCTTTTATTTCTGACAGTGGGCTTGAACAGAAATAATCATTGTGAAAAAGAGCTTCACTG-TAACTTACTGAAATATTAAATAACTTGTAAAATAATATATCCTCCAAAATGATATGTTTCTATGAGTAAGTATTTAAAGAACTTGGCATTCTTTCACCAACAGTGGCTTTTTTCACTTGCAA----TATCATCCTTACCACATATTATTTCCTTTTCAGCTTCCCAATCTCTTCCTGAGA---------AGTCAC----------ATGTATCTACTCAAAAGTGATGTGCTTTCGATTTAT--------CCTTGTTATGCACTGATCTGTTCTTTATGTTTTTTTCCCCAAAAGTACAGAATTAAAAATAAATCTTTTCTTTGTAATATTGTATCACTAGTTCTAACAATTTAAATTTTCCTCATTTGGTATCCCTGAAAAGATAACATAAAACTATCTCCCAAACTATTTACTATCCATGAAAGGGTT------TATATCAGGGGAGAAAAACTGATAAACTTCTATTAGCTGTTATCTAATGATGACCTGGTTGAA--------------------CTTCATCCTTCTGGAATTTGATGAAGTCATGAAAAAGGGGTAGA--------CCCTCTAAAACAA-----------------------CTTCAGATAACCAGTAAGGGAGAGTTGATTGAATGTTTCTTAAAGT-CCACCCTCTTTTGATATGGCAGTCTTTGTTGCCAAAGAAAGGAAGTGGGTCC---------------------TCTTGAAGACTGTGCCCTCTTGAGTGATGTTAAGCACAGCAGCAAAGTGCTTCTAAGCTTCTAGAGGCAAATCGCAGATACATCCATCC chr4 + 94230402 29781501 29781500 29783231 29781501 29781500 29783231 1731 GAGCTCCGCGCTGCAGCCAGGTCTCCCAAGCAGATA---TCTCCTCCTGTA----------TGCTCATGACGTGATCCCT-------ATTTCCCTTTTAGTTTATCATTTTAGCTACTACAGCCTCGCCGCGCTTCC------------CATTGTTTCCCTGCTAACTTCTCCCACTTGTTTATTGGC-GTTTCACATAATCTCACCATCGCTCTCTTTTATTGCTTTTTTCTTTTTTTTTTTTCTCTCAG-ATATTCTCCCTGCCATGTCCAGAAATGTA----AAAAGTAAATCTCCTCTTCTTCCAATTTACTTGCTCTCCGCAGAGCTCAGCCAAAGTCACTAAGAAGGTTCTTGTTGAAAGAGAAAGCAGAGGAGGCTCAGCGTGAACTCTCCTTCTTTTTAAGCATTCAGAAGCATTTTATAAGCCATTGTCTCTTTTTTTCAC-----AAACCAGCGCCGTGTGGCAAATTGTGCAGAATAGAAATGCCTATAATGAATGTATTTAGTACTGGGTCACGCCGATGAACATTCTGCCCCCATGAATAACACTGTTTTACAAGTTTGCAGCCCTTTCAAATTGCTGATCCCCAAACCCTATAGGCAAACTAGAAAAGCTAACACAAGCAACTGGGACTTTAGAAACCCATAGCCATCTGGCCTAAATCTCTAACAATCCAAGCCAATAATTATATCAATTCAGGCTTTAGTGAACCCCTTTGCAAACACCAAAAGAGCAAAGAAAGGAATTAGTGGCCATTCTAAGTTCTGGTGGAGAAAATTCAAAGATAATCTAATTCCATTAGTTCATGGGCAGCTTTTTTTTTGCGGCTCTGATAAATCTTCCTATAACATTTTTCCAAAACGTCAGTGTAAACTCTTTTCTGACGATAATTGGGGGAATGGGCTCAATTA----AATGCAG-TTCTGAGTGTCAATAAAAAGTATTTTGTTGATAAAAGAAGTCACTGCCCCATTA--CATGACTACG-----GAAGATGAATAATTCATA-GAAAAATAATTTCCCTGCTGAAATGCTAACACATTATATATATAGTGAAATGATA--------------ACGTGTTCCTACGAGTAACTGTTGGGTACATTTAGCTAT---------GCAGAATTTGCTTCATAGCGCAATTCTTATCA--CTTTCCAAATAGTAATTCCATTTCATCACCTTGATCTTTCTCAGAGACACCCTCTGAGATACTCTCATATTAATATCTGTATTAACAGATAGCAGGATGCCTATAGATGGGAAGAGCAGTGT----CTCTTTTCTTTTTTTTCCATTTTTATTTTGGCAAGTTCACCATCAGG----------TTATTTATAACATTGTCACAGAAGTCC--ACACTGTCA--TGCCACCAAGCATTAACACTTACAATG-AAGATAAAGATGTCACTGG-------CACAGTCCTTATCAGGATTCTGAACTAAAGCAAGGGGGAAGCATT------CCTCTGCTTTTTTTTTTCCCAGCAT---CCGCTTGAACCCCTGAGCCAGGAGAAGACCCTCCTCACTCTG----TTGGTGCAG--AGGCAGCAGCGTTGGAGTGAGTGGCGCTTGGGAACAATCACAGCACTCCCAGGGCTGATTCCTCACTCAGCCAGTGAAAGAGTCCTGTCTGAAAGTCTCTTAAACTCCCGTCCACCTTTGACATGGCAGACTTCCCTTACAAAGGGAAG-GGAGAGTCCCACGTGCAGCCCGCAGACATTTCTTATGGAGCGTGGTAT-TTGAGTGCTGCTAGGCACGTGAGCAGAGTGCTGCTGGCCTCCTGGAGACCGAGCCGGGCTATTCCCACCC ...x:::.:...x:.x.......x.xx..:.x....---.x.:..:x.x.:----------.::.:....:..xx.::..-------.x....:...x..........:x.:...x.---.x::.:..:..x:..::------------.x..:..:.:.x...:x....x:..:....:x....x..-........x...x...-------------..:.::........:x...x.........x.x.-x....:.x..:------:.......::..----........x.:..:xx..:.....x...:...:.....x............:................:....x:::...:..............x...........:..............:.......:.......................:.....::.x.-----...:...:..:.............................................................:..........................:.................:............................................:...:...x.........xx................................:.............::..............................:............................................:.:....x.....---.x..x..:.........:...:................xx..:x.:--....:...xx.:x.:......:...x..:x:x.--------x.....x...--------------------------:.:.x...x.::.::....----:..:.:.-..:.xxx.:.xxx.........----------....x..xxx.xx..:.:x...--:x....x::.-----...x.x:......:xx.:-......x.::...x...-.:.xx.:..:.x.:....x...xx.x..:....:...--------------.::....:...:......x.:..x::x:x.:..:..xx.---------:...x:x:.x:..:xxxx:....----.....--...x...x...x..x....x.....x.x:.:::....:.::.x....---------..x:..----------..:.x.x..:.x.x.::.::::x.x.x:.x..xx..--------.xx...----.x..xx...x..:...x::.....x.:::x:x....x..xx..:.::----------..x...:...:.....xx..xx...:.--...x.x.x.--.x:.x:..xx::x..x.x..x.x..x:-..x.....:x.:..x.:x:-------:..x:...x.:xx...:..------..x.x..:...:...:x.:.------.:...::.xx:.x..x..:x.xx..---.:.x.....--------------------.:..x..x:....----...:..x..--.x.x.:x..x.x.:..--------.x..:x::.....-----------------------.:...xx:.:.....:.::...xx:..x:....x..:.......x.-..::..x.:.....:.......x...:x:.xx.....::.:.-:.x.:....---------------------....:x:..x:...x:x.-.......x..:..:....:xx....:......x..::x..:..:...:.x:.x.xx:.x..:x:...:.. 36M3D12M10D19M7D30M3I17M12D39M1D16M13I33M1D11M6I12M4D165M5D318M3I46M2I33M8I10M26I19M4D7M1D22M10I22M2D10M5D18M1D17M1I37M14D39M9D23M4I5M2D47M9I6M10I36M8I6M4D47M10D27M2D9M2D27M1D19M7D19M6I20M6D25M3D9M20I13M4D9M2D16M8I13M23I46M1I42M1D9M21I18M1D70M 1117/1549 72.1% 1731/94230402 0.0% 306/1549 19.8% 107752133 82462422 +31549 chr4 + 190214555 137542944 137542943 137543629 686 AGGAGCAAA--AATG-GCCCCTTTTCTGAAGGTCATCAAAAACTATATAGTTTTGCAAATCTGCTGTAGAATAGACAGCCTCGGGGGGAGTTATAA-GAGAAAATGGCAGGCATGGCTTATCAGAAGAGTATGTATGATATAGTGAACATCAGTCTTTACATGTTAAGTCATTAACTGTTTAGGGTGCAGATAGTTCTTCATAAAGAATCAGATGTTCCATTCCTCT----------------------AGTATGGTAAAA-CCGGTGCCATAAAGTCATTGCAAAAGACAGCAAACAACTTTGTTATTGTAATGTGCTTTTTTTTCTTTT------------AACAATAGGTCTAGCAGGTGGCATGTGGCTATGGCTGGGTCTATCTCCATCTCCAGGGTGCCAAGATGTCCCTCAAAGTTTCTGTGGGAGGAATTTGTTGGTGGGATTTGGATTGTAAAGGCACGCGAGCATCTGCTGCCTCCCTGGTCTCATTACCATTCACACAATTAACTCCTGCAGCTCTCAGCTCAACAGCCAGAACCAAGGACTCAATTTTACTGCCTCTTTGACAATGCTCATTATCATTCATCTAAACTTAAGAGTTCCCAAGCTTTCAACTCAGTGGAAAGTTTTCTTGGGGGAAAGAGATCACACAGAGGAAAGCCTTTGGAATGAAGAGAGAAGGAGCAAA---AAAAAAAAAAGATTAAGGACCTAAAATCAA chr4 + 94230402 29786825 29786824 29787534 29786825 29786824 29787534 710 aGGAGTAAAGAAATGCTCCCCGCTTCT--ATGTCATGGGAAAACATGTGGAAATGTAAACCTGCTGTAGGA--AGCAGGCACAGTGGGAGCTGTAATGGGAAAAAGGCAAGCATGGTTTATCAGCAGAATATGTAACATATACTGAACATCCGGCTTCCCAAGT-AAGTTGTTAACAGTGCTCAATACAACTGTTTCTCTTTAAAGAATCAGATGTTCCTTTTTTTTCCTTTTCTTTTTCAGTACATGCAGTATGGTAAAAACTGGTGCCATAAAGTCATTGCAAGAGACAGCAAACAACTTTGTTATCATAATAGGCTTTCTTTTTTTTTCTCCTTTATTTAAACAATGGCTCTAGCAGGTGGCATGTGGCTGAGACCGGGTCTATCACCATCTCCAGGGTGCCAAGACGTCCCTTAAAGTTTCTGTGGGAGGAATTTGTTGGTGGGATTTGGATTGTAAAGGCACGTGAGCATCTGCTGCCTGCTCAGTCTCATTACCATTGACACAATTAGCTCCTGCAGCTCCTGACCTGGCAGCCAGAGCC-GGGACTCAATTTTCCTGCCTCCCTGACAATGCTCATTGCCATTCATCGGAGCGCTCGGGCTCCTCTTCTCCAAGTCCAGGCCAAGGGACT----GCAAAAATGGTTTGCACAGGGACATGC--------TCAGGGGTGGAGAAGCAAAGTGACATAACAGCTACTAACAGCCTAAAATCAA .....:...--....-x....x:....--.x.....x::...x:..:.:.xxx..:...:.........:.--::...x.x.:.x.....:.:...-.:.....x....:......:.......x...:......xx.....x........x.x...:x..x..-....::.....x..x:xx::.:..:x.:x....::x..................x..::.:.----------------------............-.:.....................:......................::....:x.....:....:....------------......:.x.....................:x.:.:.........x....................:......:...................................................:...............x.:::..............x.........:............::::.::::........:..-:............x.......::..............::........x:.:.x:xx.:.:...:xxx..::x.:::...xxx..:.xx:.----.x::...x:.x.::.....:.:x.x..--------.x.:.:.x.:..:......---.x.x..x.:xx.:...x::........... 9M2I4M1I11M2D42M2D23M1I67M1D62M22I12M1I69M12I203M1D90M4D27M8D19M3I30M 514/668 76.9% 710/94230402 0.0% 60/668 9.0% 107756119 82458436 +12986 chr4 + 190214555 137543186 137543185 137543472 287 CATAAAGTCATTGCAAAAGACAGCAAACAACTTTGTTATTGTAATGTGCTTTTTTTTCTTTTAACAATAGGTCTAGCAGGTGGCATGTGGCTATGGCTGGGTCTATCTCCATCTCCAGGGTGCCAAGATGTCCCTCAAAGTTTCTGTGGGAGGAATTTGTTGGTGGGATTTGGATTGTAAAGGCACGCGAGCATCTGCTGCCTCCCTGGTCTCATTACCATTCACACAATTAACTCCTGCAGCTCTCAGCTCAACAGCCAGAACCAAGGACTCAATTTTACTGCCTC chr4 + 94230402 29669414 29669413 29669698 29669414 29669413 29669698 285 CAAAATCTTATTGTGAGTCACAGAAAGCAACTATGT-ATAGCAATATAAAATCCTATAGCTTAACATTTGCCCTAGCAGGTGGCATATGGCTAATACCGAGTCTGTCACTACCTCCAGGGTGCCA-GACACTTCTCAGATTTTCTGTGAGAGGAATTTTTAGGGTAGATTTGGATTGTAAAGGCACGTGAGCATCAGCCGCCTGCTCAGTCTCATTATCTTTGACAGAGTTAACTCCTGTAGTTTTTAGCTCAGTAGCCAATGCCAGAAGCTCAACTTCACTCTTTC ..x..xx.:....::.:xx....x..:.....x...-..x.:...:.:xxx.::.x.xx:......x.x.x:..............:......xx:.:.:....:..x.:.:.............-..:::::....:.x........:.........x.x..xx:.....................:.......x..:....x.:::.........:.x..x...x.:..........:..:.:.:......::.....:x:...::::.....:..:...x::.. 36M1D88M1D161M 203/285 71.2% 285/94230402 0.0% 2/285 0.7% 107873772 82340783 +11991 chr4 + 190214555 137576516 137576515 137576837 322 AGCAACAAAAACAACAATAGAAAGGGGTTGGTAAGGCTTTCAAAACTTGTAAACTTTTTATACACTGTACTTGACATATCTCAGTGGAATGTGCATCAGAGGGGAAAAAAAGCATGTCATTGCTCTGAAACTGTCTTTTCTAATTCAGTGCATCCATGTATTGTTATAAATCTGTTTCCCAATCATGCTTCCTCACTGAAAGATGCAGACACAAGGGAACAAGCTGCACTACTATCTATCAGCTCAGATAAAGGAAAAGTTTCTTTTAGCCTGACACTGACAGCTTA--ATGAAATGAAGGCCAAGATGCATGCATGCAAATAA chr4 + 94230402 29798059 29798058 29798360 29798059 29798058 29798360 302 AGGAAAGAAGAAAACAAGAGCACAGG-CAGGAGAACCTTTCGGATCGCATGCAGCTCTCATGCCGTGTATTTTACTTATCTCAGTGGAGTGTACACTGTAGG---AAAAAAACATGTCACTGCTCTAAAACTGTCTTTTCTAATTCAGTGCATCCATGTATTGTTATAAATCGGTTTCCCAA----------ACACTGAAAGATACTGCAACAAGAGAGCAACTTTGACTGTTAGCTATCAACTCAGAT-AATGAAAACTTTCTTTCAGCATTAAGCTTCCAGTGTATGAAAAAAATAAGACTAAAA-------ATATAAATAA ..x..x:..:.x.....x..x.x:..-:x..x:.:x.....::.x.x::.:x.x:.:.:..:.xx....:..x..x............:...:..:::x...---......:.......:......:.............................................x.........----------x...........:.x.xx.....:..:...x:.xx...::..x......:.......-..x.....x.......:...x.x.x:..xx...:x..--.x:...xx...:.:..:.-------..::...... 26M1D75M3D77M10D57M1D37M2I18M7D10M 222/300 74.0% 302/94230402 0.0% 24/300 8.0% 107778457 82436098 +11611 chr4 + 190214555 137599797 137599796 137600130 334 CTGAATACACCACCTGGGGAATATCATCT-GAGGGTGACTTTGGTTATG---------------GTGCTTTTTAAGGCTGCCTTAATTGCTTTTGCATGCAGCTATATTCATGAATGTGCATTCATCAAAGAATGAAGAGCAATGTGACATTTTCAAGTTTTACTAAGTCAACTAGCATCCGTTGCCATAGTACTCAGAAA---TAAGGAAGCCAGGAAAAGGCAG--AGCTGTTTTTCATTATGCATTGAAAGATGTCAGCAGGATTAAAGTATAAAAGCAAAAAGCAAAAAAAAAAGCTAAGAGAAGGTGAACTACTTACCAAATGGTCACTAATGAATATAAAAAGCAAATA chr4 + 94230402 29807029 29807028 29807373 29807029 29807028 29807373 345 CTGAAAATAATACCTAGGTGATATATTCAAGAGAGTGTCTGTACTTACGTCTCAGCTAGTAATCATGTTTTATAAGGCTGTCATTATTGCTCTTGGCTTGAGCTCTGTTAATATATATGTATTCTTCAAAAGA-GAAGTACAACACAACATTTTCAAGTCTTGCAAAGTAAACTATCATCTGATGCCTTGGTATTAGGAGAAGGAAAGCAAGCAATGAAAAGACAGGTAGCTGCTTCTCATTAACTATTGTAAGATGTCAGCAAGATTAAGGTGTCAGGGT---------ATAGGAAGATGAAGAAGAAAAGAACTACTTAGCAAATAGGCATAAATGAATATAAAATGTGAATA .....x.:.x:....:..x:....xx..x-...:...x..x.:x...:.---------------:..:...x........:.x.x......:...xx.xx....x.:..x..:x..:..:....x.....::.-....x:...::::............:..:.x....x.....x....:.x....x.:...:.x:..:.---x...x....x.x......:...--.....:..:......xx:....x............:......:..:.x.::.:---------.x.::..:::x....::.::x..........x.....:.x..:x.............x.::.... 29M1I19M15I69M1D67M3I22M2I53M9D65M 230/324 71.0% 345/94230402 0.0% 31/324 9.6% 107792768 82421787 +3993 chr4 + 190214555 137609701 137609700 137609826 126 AGGAG--ATATTGACCAGATAATTCAGAGCAGATTCCATTCCCATGGATATGAAAATAGAAAGCAAAAA--AGGCAGGAAGCAGCAGTGAATGCAATAGTTA-AAATGCAGCTTGCTTTGAAGAGGAGGGG chr4 + 94230402 29696280 29696279 29696409 29696280 29696279 29696409 130 AGGAGGCATATTGGCTGAATACTGAAGATTAGATTCCATTCCCAGAGATATGAAAATAGAAATGAAACATGAAGTAGAAAGCTGTGG-GTATGCAGAAGATACAAAGACACCTTATTTGGTAAAACGGGAG .....--......:.:::...x.xx...x:..............x:................xx...x.--.:.:..:....x.::.-.x.....:x..x..-...x:..x...::..x.x.:.:x:..:. 5M2I62M2I16M1D14M1I28M 89/125 71.2% 130/94230402 0.0% 6/125 4.8% 107913421 82301134 +10577 chr4 + 190214555 137609724 137609723 137610001 278 AGAGCAGATTCCATTCCCATGGATATGAAAATAGAAAGCAAAAA--AGGCAGGAAGCAGCAGTGAATGCAATAGTTAAAATGCAGCTTGCTTTGAAGAGGAG---GGGGGAAGGGTGGAAGGAAAGAAATAAGCAACCA--AAGACAGGTCATGTAAACCATGAGCCAGGAAGTAAATTCTTTAAAATGATGCTTGCCAGAAGCTAAATTCTTGTAAATGTGGGCC-TTTTTTTCCCCCTAATGCTA-----------TTACTATTGGAAT----GAGGAATACTTGGGGACCGGATGAGG chr4 + 94230402 29815079 29815078 29815372 29815079 29815078 29815372 294 AAAGCAGATTCCTTTCCCATGAATATGAAAATAGAAAGCAAACATGAGGCAGGAAGCTGCGG-GAACACTGCAG--AGCAGGCAGCTCG----GGGGAGGCATGTGGGGGTAGGGTGGGAGAAAAAAAAAGAGTGGGTGGGAGGACTGGACATGTAAATTATGTGCCAGGAAATGAATTCCTTATAATGTCGCTTGCCAGAAGCTAAATTCTAGCAAATGTAAGCTGTCTTTTTCCCCCTCTTACAATCTTTCCACAGTTCCTCTGAGGGTCAGGGAGGAAGAAGCAGGGACAGGAAGAGG .:..........x........:....................x.--...........x..:.-...::.x::..--.:x.x......:.----.::....x:---.....x.......:..:...:...x:..:::x::--.:...x..x........::...x........:.:.....:...x....x:.....................x.:......::..:-.:...........xx.:.x.-----------..x..x.x:.::.----......x.xx::.....x...x.... 44M2I16M1D11M2D13M4D9M3I34M2I85M1I20M11I13M4I26M 205/271 75.6% 294/94230402 0.0% 30/271 11.1% 107794645 82419910 +3889 chr4 + 190214555 137615761 137615760 137615839 79 GTGGTGCATACCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGAAGGTGGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x....:.:.........x.::........x.xx.x...x................x.xx:..:...:. 8M2D69M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 61582560 NA +12556 chr4 + 190214555 137620910 137620909 137621445 536 TGGAAGTAATTTTAATATTAGTAACAAAAGTTAAGGAACTGAACTATAAGTGTTCCATTTTAAGCCCTATATTTGGAGAACCAG---AGCCTGCCT--CACAGGAAGCAGCCTGGTTGCCTGCCTGTGAAAAGTTTCACACGCCCTCCTTTTGCCCCCTTAGCCTTCTCACTTCTTAGCCCCACC--TTGC--TCACTTGCCCCATTAACACTGAGCATAAATCAGTGTCATCTGCTGTCTCTTGCGTTTCTTTCTTCCCTT--CCTCTTTCACTCTCTTTCTCTCCCTGTCTGTCTTTGTAAGTTGGTCTCCATTG-CACCATATGG-CAGCTGAGAGAAGGGGAGAGCAATTATCTGCCTCTG-AACAAAAGGCGCTGTGGTGACACAGCGGCCCATGAATGCATGAGACACGGTCATGTATAGAAGG--GCCTCCAGCCCTGTCAGCGAGA--CTAAAGGGAAGGGTGATGGAGCTG---------CCTCCAGATAGGCAGACAAACCAGTAAACCCTTCCTCAGTGTCCCTTTCCC----TCCTCTCCTTCCCTCTGTTTTCA chr4 + 94230402 29822181 29822180 29822712 29822181 29822180 29822712 532 TGTAAGTCATTCTCAGAT----AGCATTACTAAGATAACAAAAATGCGTATGTTTATTTTCAAGGGCTCTGTGTGGAGAGCAAGCACAGCATGGCTGTCATCCGAA-CAGCCTGGTTGCCTGCTCGGGTGACGGTT---------TTCTATT----CCGAGGCATCCCCTCT------CTCCACCAGTTGCAGTCACTTGCCCCCTTTGCTCTGAAAATAAATCAATTTCATCTGCCGCAGTCCG-ATTTCTTTCTTCTCTCTGCCTCAGTCCCTCAGTCCCACTCCCC-----TCTTTGAAAGGCTCTTTCCACGGGCACCATATGGGCAGCTGGGAGAAGGGCAGAGCAGTGATCTAGCTCTTTAACAAAAGAGGCTGTGGTGTCAAAAAGCTTCATGAATGCATGAGACACATTCATGTATAGAAAAATGCCTCCAGCTCTGTCACGAAGGACCTAAAGAGAAGGCTGATAGGCCTGAACATTGGCTTTCGAGTTAAGAAAGGGCAGCAGT-----TTCTCTCTGCGGCTCATTCCCCTGGCCCTCCCCCCTCCCCCAGTTTCA ..x....x...:.x.x..----.:..xx.x.x.::x...x:..x.:::x:....:xx...:...xx..x.:.x......:.x..---...x..x..--..:xx...-................::.x.x:.x.x..---------.:..x..----..xx:..x.:.:.x..------.:.....--....--...........x..x:.x....:x........:.x........:.:xx:::.-:...........:..:--....xx..x...xx.::.x.....:-----......x...x:xx.:....:x.-..........-......:........x......:.x....:x....x-........:x.........x..x.:x.x::..................:x............::--.........:......xx:..:--......:.....x....:.:x...---------::..x..x..:.x.::x:x.x....-----:.::...x.:.x.:.x.....----:....:..:::..:.::x..... 18M4D62M3I9M2I8M1D29M9D7M4D16M6D7M2I4M2I52M1D16M2I25M5D23M1I10M1I36M1I64M2I22M2I24M9I25M5D21M4I23M 353/501 70.5% 532/94230402 0.0% 66/501 13.2% 107798729 82415826 +14560 chr4 + 190214555 137620926 137620925 137621558 633 ATTAGTAACAAAAGTTAAGGAACTGAACTATAAGTGTTCCATTTT-AAGCC---CTATATTTGGAGA---ACCAGAGCCTGCCTCACAGGAAGCAGCCTGGTTGCCTGC-CTGTGAAAAGTTTCACACGCCCTCCTTTTGCCCCCTTAGCCTTCTCACTTCTTAGCCCCACCTTGCTCACTTGCCCCATTAACACTGAGCATAAATCAGTGTCATCTGCTGTCTCTTGCGTTTCTTTCTTCCCTTCC--TCTTTCACTCTCTTTCTCTCCCTGTCTGTCTTTGTAAGTTGGTCTCCATTGCACCATATGGCAGCTGAGAGAAGGGGAGAGCAATTATCTGC--------CTCTGAACAAAAGGCGCTGTGGTGACACAGCGGCCCATGAATGCATGAGACACGGTCATGTATAGA--AGGGCCTCCAGCCCTGTCAGCGA-GACTAAAGGGAAGGGTGATGGAGCTGCCTCCAGATAGGC---AGACAAACCAGTAAACCCTTCCTCAGT-GTCCCTTTCCCTCCTCTCCTTCCCTCTGTTTTCAGTGTT----TTTCATTTGCTTGTTTCTGTGTCCAAATCAGATTAG-TTTATTAATGACA---------AAGTCAGAATGTGTGGCAGAACAAGAAAT---TAAAGCAAGCTACCTTATTCATACACTTCT chr4 + 94230402 29703340 29703339 29703966 29703340 29703339 29703966 627 ATTTGTTACAGTAGTTAC---ACAAAACAATGGTGCTTCTATTCTCAAGCCATGTTATTTTTTAACATATACCAGAGC-TGTCAAACAGG---CAGCTTGTTTGCCTGCACTGCAAGAAGGTT------------TTATATTCCAAAAGGCTT-TCACCCCCTACTCCC--------------------TAATGGTGAAAATAAATCATTTTCATCTGCTGGTAGTTTCATTTCTTTTTCTCCCCCCAGTCCTTCCTTTTTTTCCACTTCCT--------TAGTGGGCCCCTTTCCACAATGCCATATGGCAGCTGAGGGAAGGGTAGAGCAATGATCTGCATTTTCAGCTCTTAACAAAAGATGCAATAGTGTCAAAGAGGCTCATGAATGCATGGGACACATACATGTATAGAGCAGTGCCTCCAGCTCTGTCAGGAAGGACTAAAGAGAAGCCCGATAAACCTGACATCACTTCAGCTTGAAGAAAGGCAGCAGTGCTTTTCTCAGTAGTTCATCTCGCTCCCATCCATCTCCCCCAGCTCCCTGCTCCCCTCCCACCCCTTTGGGTCCACGTCAAAATCCCATTAGCTCTATTAATGACATGTGGTTCGAAGCAAAAGCGTGTGGCAGAACAAGAAAGGCACAAGATCAACCGTTTTATCTATTCGTTTTT ...x..x...:x.....x---..x:...x..::xxx...:...:.-.....---:...x...x:.x.---........-..:.xx.....---....:..x........-...::.:...x..------------..x.:::..xxx..x...-....::.:..x:...--------------------...::x...:x........x.x..........x:xx..x.:.......:.::..::..--..:...x:.:.:..:.x..:...--------.x..::.::xx.:....:x:::................:......x........x......--------....x........::..x:.:...x..x..x...:............:.....:xx..........--..x.........:.......x:.-........:....xx:...::.x...x.x:..xx.x:..---.::x..:x...:.:xx.:..:......-..:.x.:..x....:x...x..:.:.:xxx:..xx..:.----.::..:::x:...xx..:::...x.....xx.....-.:...........---------...:x.:.::..................x---:..:::x.:.::::....::..x.::..:. 18M3D24M1I5M3I13M3I8M1D11M3D16M1I13M12D18M1D15M20D58M2I23M8D61M8I66M2I23M1I39M3I27M1I39M4I36M1I13M9I29M3I30M 403/585 68.9% 627/94230402 0.0% 90/585 15.4% 107917586 82296969 +12194 chr4 + 190214555 137622544 137622543 137623537 994 CCCAACAAGGTATCTTGGATCACAAAATGCCAGTCCCCTGTGGTTATTTAAAGAAACCTGGGCAGGTTTCCAAGTTCTGGTGTCTGTGACCTATTACACGGAGGCAACAATAATAGTTCCTCATGAAATAAATCAATGGACATACGTAGAGTACTTCTACCATGCCATGTACTATTTTTTACTTCAATCTTTAAGAAGAAAGTGAAGGTTATGT-AACTCAGTTTCACACATTGTCTACATTTATAACAGGGCTTCTC------TTCAGGA---ACATTTTTACTATGAAG----------ATACCCTCCCTCTCTTTTATCTATGATGTTATTTAACACTTA----TTTAACGCTTTTCAATAATAAATGCAACTTTTAAAA-----ATTCATATACA-ATACTTTTCTTTGTACAATGCAGTCTGAGACTGAT---------GGTTAT-TTGTCAGTTGATGAAAAAGCAAAATATCATTGGCTTTTCAGTTATATTCTTCATAAATTCTCTTTCATAATTACTATACATGTTTGGTTTTACATGAA-------ACATTCATTAAAATAAACATTCATTAAATAAACAAAACCAAGA--------------------GCTAAGAG----------------------------TGCCTGTG------------TTTAGCAAATATCAGGACTCTGCACGTTTCTACAGCAGTAAGAGTTAT------------------GTGGTACA------------------TCATCTGTCAGAAAGACTTGTGTAGAG--------AGAACCCTCTGTGGTACAAACAGAAAGCAGGAAACAAAGCAACTATTCAACCTTTTCTATTCACTGCACCCACATCTGTTTACATGGCCTCTGCTCAATCCTGAAAGGTTTTGTCCTCCTACCTCCATTTTATTTTACACAGCTCTGAGCGGCTGGCAGCTTGGAAGACTTTTCTTTCTTTTTTTTTTCCTTAAGAGCTAGGGATTCAAATCTGTTTTGTAAAACAGAAATTTGAAAAACAGGCTTACAGATAGCAGTTGGTCCCTTTTCTAGTCTATCCAGTTGGAGTTCTAATG----------AGGGATATAAACT----CCAACATTCTCATTAATTTTTAAAATAAATTTAA chr4 + 94230402 29824688 29824687 29825740 29824688 29824687 29825740 1053 CCCAGAAAGGCCTCAGGAATCACAAAACTCAGTGTCCCTGGGGTTATTTAAAGGAACCTGGGCAAGCTTCCAAATGCTGGTATATGTGACCT-TTACAAGTATTCAATAATAACAGTTCCCTATGAAATAAATCAACGAACATGTGTATAATAACTCAGCAGAGGCATG---------------AAAGTTTCAAGCTGAAA-------TTCTGTCAACACACTTGAATTGTTTCCCTACAATCACTCTAGAAGATGTTACTGAATGCAGGGTGTACATCATTA-TACAAAATCTGTTTACAGTATCTCTCCAGTCTTCCTTCTTGGAATGCACTTAACGTATAGCCATTGAGCACTGTTATGTA-TCCATGTATGTATTAAAGCTACTATTTATAGGCCCATCATGAGCCACAGACAATGGAAAATGAGCTAGTTTCCAAAATAAACTACATCATCAATTTAAAAAAAAGCAAAA---------------------GTTCCTCTTGAAGGGGCTTTGATGGT----------GTCTTTCTTTAAATGAACTCTGCTATACACATTaaaaaaaaaaa-----aaaaaaaaaaaaacaaaaaaaaaCCTACTGTAAATACTGCTCAGGGATGCCTTGGAAATGGCTCTGGGGGGTAATGTCTGTGATATCTGATAGACTTAGTAAAACTTAAACGCGGTCACGTTT-------GGTGTTGGTTGTTTCCCCCCCCCCCCCCAAATGGTAAACAAGCAGACTTTAAGCTCTCATCTGCAAGTGTGACTTGCGCTGGTGCCTGTTCAGAGCGCT-------------GGGAGGCGAGGAACAATGTCACTATTCAGGCTGGCCCATTCACTGCAGCCACATCTGTTTACATGGCCTGTGCCCACCTCTGAAAAGGCTGGTCCTCCCACCGCCATTCTATCTCCCGTGGTCCTGAATGGCTGGCCGTCTGAAAGCC--------------TTCCTACTGAAAATCTGCAGTTTCAAATGTGTTTTATGAGACC-AAAGCTGAAAGACAGACTAACA-ATAACGTTTGCACGTTTCTATAGTCT----GGTTTGAATTTTATTGTCATCTGAGAAGGACTATAAAATTGTCCCAGC-----TACCGAGGTTCAAAATAAGTCTGA ....:x....:x..xx.:.........:x.x:xx:.....x............:..........:.:......:.x.....:.x........-.....x.x.xx...:.....:......::..............:.:....::...x.:..x:..x:.x:x.x....---------------x..x:..:...xx....-------..x...-...x..x..xx.:xxx..x:.....x.:.:xx:..::xx.x.:------.x....:---....:x...-..::..:----------:..:.:::..xx....::x...xx..xxx:.:.....::x..----..x.:.:..x..xx:..-.xx...:.xx.x.....:-----...:...x:.x-..xx.xxx.:x::x......x.:xx....x:x.x.---------:::..:-.::...:..x.x:...........---------------------:...:..x.:..xxxx....x..::.----------..:.xx:....x.....-------.:.:x........x...x.x-----...x...x....x...:.--------------------...x..:.----------------------------..:.....------------:....:...xx.:.::xx:xxx.......-------:..:xx:...:.------------------:.....x.------------------.......:x..x:x......:.:x.:x--------...:.x..-------------:.:.:..::.:.....x.:x........:x..xx:.:..........x.....................x...:..x::......:.x:.x.......:...x.....:...:.:x.:::.::....::.......x.::..:...x.--------------..::.x..x..:.x..:x:.x.......x......:.:.:..x-...x:.....:....:..x...-...:.:x...xx.x:..:.x......----:...x..:..:..x..----------...:x......x.----...:.-----:.:::.xx..:.......:.:.:. 92M1D76M15D17M7D6M1I43M6I7M3I9M1D7M10I42M4I17M1D18M5I11M1I35M9I6M1I24M21D26M10D17M7I20M5D18M20I8M28I8M12I29M7D12M18I8M18I27M8I8M13D148M14D43M1D22M1D26M4D16M10I13M4I5M5D24M 589/888 66.3% 1053/94230402 0.0% 271/888 30.5% 107797856 82416699 +14154 chr4 + 190214555 137703160 137703159 137703622 463 AAACTGTTCTCCTCTTGAGCTGATTTTCTCCAGTACTGGAAAGAAAAAGTACTAAAAAGCAAGTTCATTTTATCATGGAAAGTTCACTCTGGTGACATTATTCTCCAATTTCTAAAAATCCTAAA-CCATTTTGCACCCAGCTTGAACCAACAGCTGTAGCTTTTCTGCTCTCAGTCCCTAATTTGTTTGCATTTGGCTTATATTTCTAGCTCTTTGGAGTGCTGATAATTATACTTGTCTGGGAGGCTTAGAAGCTGTAAAAAATCTGGACCTTCTCACTTTTCAGCACAAGCA-GACAAGGCTCAGGCTCCAATTTGGAACTGCATGACTTAAATGGAGCATGTGAGCCCAGAGACATCAACAGCAACCTGGCAGCTTGAAGACTGTTCTCCAAAGCCACTCACCATATG-TTGGCTACAAATTGAAGACCAAACAGGCCACAGTGGTACATAGGATTCAAATG chr4 + 94230402 29861777 29861776 29862222 29861777 29861776 29862222 446 AAACTGCATACCACTTGGGCTGATTCACACAGGCGTTGGGAGGAGGA--TGCGGAAGAGTAGGCT-GCTTTCTCATGAGAAGTTCAACGTGGTAAAATTCCTCTTCCATTTCAGCAGCTCCTAAAGCCATTTTGCACCCAGCTTGACCTGACAGATGCAACTCTTCTGCTCTCTCTCCTTAATTTGTTTGCATTTGGCTCAGGTTCACAGGCTTTTGGAGTGC--ATGAC--TGCTTTCCTAGTGGATCTGTAA-----AAAAAGTCTGTGCCTGCTTAAATAACAGTATGAGAATGATAGAGTGGATGTTCC--TTGGAAGCAGCA------GAAAGGGACAGACAAGCTGACAGCCAGCATTCCTGTCCTGCCAGCTTGAAGGATGTTGCCCACAGCCACTTACCATATGTTTGGCTCCAAACTGTGGAGCAGGCAAGTCAGAACGATGCACAGAATTCAGATG ......:x:x..x....:.......:x.x.x:.:::...:.:..::.--.:.x:..:..:.:.:.-::...x.....::.......x:x....:.x...x:...:.x.....x:x.:x.......-....................x.::....x..:.:..:..........xx...:....................:.x:..:x:..x::..........--..:.:--.:...x:..:.x:.:::.:x..-----.....:....x:...x..:.xx.xx...:.::..x.-..:.::.:xx.x.:...--..x.:.:.x...------:..x..::..x:::...:x.x..x..x..x:xx::x....x..........:x....x:...x.......:........-......x....:..x:..x..::..:.:..x.::.:.:..:..:.....:... 47M2D16M1D59M1I97M2D5M2D22M5D36M1I17M2D12M6D79M1I53M 298/443 67.3% 446/94230402 0.0% 23/443 5.2% 107841383 82373172 +3060 chr4 + 190214555 137776183 137776182 137776257 75 TTACATCAGTATTCTGTTTTTTTTGTTGTTGTTGCTGTTGTTTTGTTTGTTTGTTTTGAAAAGGAGTCTCGCTTT chr4 + 94230402 77840980 77840979 77841054 77840980 77840979 77841054 75 TTATGTTTGTGGTAGGTTTTTTCTTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGATGATTATTTCTTT ...::.:x..:x.xx.......:.x..x......:........x...x..........xx:.x..x.x.:x.... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 59935203 NA +11995 chr4 + 190214555 137794891 137794890 137795361 471 TGCAGGTGCCAC--TGCCAAGTGCCAATGCTATACAATATTTGTTCACCACTGCCCACATGGGACCAAACCCACACTTAATAAGACAGAGACTGCATTGTCATGACATATGCGCAATAATATTCCCTGCATTTAAGCCCCAGAAGCATGG-TTATTTAGCTAACGTAGACTTCTGCTATAATCATAGCAGTTTTTCTTCCAGCAGTAAAAGTCTCACCAACTACAGTTCGGCATTTTCTGCTTTCCAATTACTCGCTGATGCTATGCCAAGTACAGAGTAATA-TTTTCATATATCACTAAACAAATGC--AGTTGTGCTCCCCAAACAGGTTTCAGTTTGGGCTAAACTATATCCATTAAAGCTTTCATAAATGGAACACCCTTCAGCTTGTAG-TTTCTTTTTACTCATAACTATTTAAACTGCACAGATAATACCTCAACTTCCCAGCAAGTGCTGCATTAGCTGGGCAATCTTT chr4 + 94230402 29900883 29900882 29901338 29900883 29900882 29901338 456 TGTATGTATCACCTTGTAAATTGCCAGTGCTACAGAATATTCATGC----CAACTCATATGGGACCAATGCTCTGTTACATCTTATAGCAGCTGCACTGTCATCAGGTATGCTCTGAAATAACCCTTTGGTCAAAGACTCAGAACTACAACTTGTGTGACCAAT-----------CCATCATT----TATTTTGTTGCCCAGCTCTAAGA--CTTGTAAACCATGAGTAAGT-TTTCCTGCCATGCAATTACTTGCTGATGCTGTGCCAAGTTCAGACTAATGGTTTTCATGCATCATTAAACATAGTCCGAGTGGGGATCCTACAACAGGTTTCAAACTGACTTGAAGAGATTTCATTAAGTTTTTCTTAAATGGTCTACTTCGCAGCTTGTGGCTTTCTTCCTTCTCATAAACGTTTAAAATATGAAGTTAATACATCAGCTTCCCAGCAAGTGTCATATTAACTGTTTAGTTTTT ..:.x..::...--..:x..x.....:.....:.x......::.x.----.x:.:..:..........xx.:x:::.xx..xxx.:..x::.....:......x.x:.....x.x:x....x:..:.xx:.:x...x.:.....x:.:::-..:.x.::.:..:-----------.:..x..:----:.x...x.:x:.....xx...:.--..:::x...:.:::x.x:.:-...:....:x.x........:.........:........x....x....:-.......::....:......x.xx.--...x.x.x...:xx...........:x:..:x:.:..xx:xx.:......:x:....x.......xx:..:::x........:.-......::.x.......x::......x.:::x..x......x...:..............::::....:...xx:.:.:... 12M2I32M4D100M1I13M11D8M4D23M2D20M1D50M1I25M2I84M1I82M 293/449 65.3% 456/94230402 0.0% 29/449 6.5% 107894008 82320547 +3525 chr4 + 190214555 137808844 137808843 137808922 79 GTGGTGCAGGCCTGTAATCCCAGCTACTTGACAGGCTGAGGCAAGAGAATCGCTTGCACCCAGGAGTCAGAGGTTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........x.--....:.:............x........x.xx.x...x.:....x......:..::xx:..:..::. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 61775643 NA +3239 chr4 + 190214555 137827873 137827872 137827929 57 GAAGGGGAAGGGAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAA chr4 + 94230402 31357957 31357956 31358013 31357957 31357956 31358013 57 GGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAA .::...:...x...:......:........::x::....:.xx.....:........ 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 106469916 83744639 +3208 chr4 + 190214555 137827885 137827884 137827987 103 AGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAA---------------------GGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAA chr4 + 94230402 31357890 31357889 31358013 31357890 31357889 31358013 124 AGAGAAAGCTGGTAAAGAAAAACAGAATGAGGGTAAAGAACTAAACTCTCATATCCCTTAAAATTCAGGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAA ..:.:...xx:.x:......::x::.:x.....x..:...xx:..---------------------:.::...:...x:..:......:........::x::....:.xx.....:........ 45M21I58M 67/103 65.0% 124/94230402 0.0% 21/103 20.4% 106469995 83744560 +4350 chr4 + 190214555 137827897 137827896 137828102 206 GGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGA--------AGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGA------AGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAAGGAAGGGGAAGGGAAGGGAAGGAAGGGAAGGAA chr4 + 94230402 34805240 34805239 34805457 34805240 34805239 34805457 218 GGGCGGAAGCAGGAGGGAGAAGCTGGCTGTGACAGCTTTAATGAAGGAGAAGGGCTGGGAGTG--GGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAA ..:x.:...x:.:......::.xx..xx.x..--------.x.....:.....:xx....:x.--.....::.x.:........::::..::x:x.:..::x:...x.x.:.x.:x:...x.x.::......:.x:x.....x:...------......x:..:x.x......:xx:::.x:xx:...:..:.:...::x:.......:.:.x::..... 32M8I23M2D82M6I67M 121/204 59.3% 218/94230402 0.0% 16/204 7.8% 103022657 87191898 +3208 chr4 + 190214555 137827943 137827942 137828045 103 AGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAA---------------------GGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAA chr4 + 94230402 31357890 31357889 31358013 31357890 31357889 31358013 124 AGAGAAAGCTGGTAAAGAAAAACAGAATGAGGGTAAAGAACTAAACTCTCATATCCCTTAAAATTCAGGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAA ..:.:...xx:.x:......::x::.:x.....x..:...xx:..---------------------:.::...:...x:..:......:........::x::....:.xx.....:........ 45M21I58M 67/103 65.0% 124/94230402 0.0% 21/103 20.4% 106470053 83744502 +3197 chr4 + 190214555 137827971 137827970 137828077 107 GAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAAGGAAGGGG chr4 + 94230402 47597925 47597924 47598031 47597925 47597924 47598031 107 GAGAAAAATGGAGGATGCAAAGGGGAGTTAAGCCAAGAGACTCCAAGAAAGAGCAGGTGTAGGGAGGGAAGATGAGCAGAAGGAAGGCAGCAAGAGGAAGAAGGAGG ...:::..x.:...:x:x:.......:xx...xx:.::..xxxx.......:.x.:.x.x:....:.....:x:..x.:::......x..x:.:......:.:.:.. 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 90230046 NA +3088 chr4 + 190214555 137828022 137828021 137828079 58 GGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAAGGAAGGGGAA chr4 + 94230402 31357957 31357956 31358014 31357957 31357956 31358014 58 GGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAAA ...::.::..x.::.........:.....:..x.:....:.xx:....:......:.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 106470065 83744490 +3924 chr4 + 190214555 137828033 137828032 137828226 194 GGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAAGGAAGGGGAAGGGAAGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGAAAGGG--AAGGAAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGAAAAGGA----AGGAAGGGGAAGGAAGGGA-------AGGAAGGGGAAGAA chr4 + 94230402 59372550 59372549 59372754 59372550 59372549 59372754 205 GGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACG--AATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA ..:..:...x:.x.x:........x..x:.:......::.x:xx...:.x..x.--.:x..x::......:::x..x:.x::x..x..:....:x.:::..........:::--..x:..:.....::x..x:.x::.....x...x..x:::.:.....x:.----......:::x.:x..:..:-------.:x...:....:.. 54M2D56M2I49M4I19M7I14M 115/192 59.9% 205/94230402 0.0% 15/192 7.8% 78455483 NA +3236 chr4 + 190214555 137828065 137828064 137828120 56 AGGAAGGAAGGGGAAGGGAAGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAGGA chr4 + 94230402 48632633 48632632 48632688 48632633 48632632 48632688 56 AGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGA ..:......:.:x.......::..:....x.........x.....:.x.::..:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 89195432 NA +3059 chr4 + 190214555 137828141 137828140 137828198 58 AGGGAAGGAAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGAAAAGGAAGGAA chr4 + 94230402 31357956 31357955 31358013 31357956 31357955 31358013 58 AGGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAA ....::.:...x.::.........:.....:..x.:....:.xx:.:....:.:.... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 106470185 83744370 +3292 chr4 + 190214555 137828155 137828154 137828229 75 AAGGAAGGGA-----AGGAAGGGGAAGGAAGGGGAAGAAAAGGAAGGAAGGGGAAGGAAGGGAAGGAAGGGGAAGAAAAG chr4 + 94230402 55453399 55453398 55453478 55453399 55453398 55453478 80 AAGGTAGAGAGAATCAGAAAAGAGGAGGAAAAGGAAGATAAATAAGTAAGGAAAAGGAAGAGAAATAAGCTAAAAAAAAG ....x..:..-----..:..:.:.:.....::......x..:x...x....::.......:...:x...xx:..:..... 10M5I65M 54/75 72.0% 80/94230402 0.0% 5/75 6.7% 82374756 NA +3165 chr4 + 190214555 137828260 137828259 137828321 62 AGAAAAGGAAGGAAGGGGAAGGGAAGGGAGGGAAGGGAAGGAAG-GGAAGGAAGGGACAGAGA chr4 + 94230402 48632628 48632627 48632690 48632628 48632627 48632690 63 AAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA .:.:x..:......:.:x.......::.......x.........-.....:.x.::.x..... 44M1I18M 47/62 75.8% 63/94230402 0.0% 1/62 1.6% 89195632 NA +3374 chr4 + 190214555 137833425 137833424 137833491 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATGACTTGAATCTAGGAGTCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.x..x...xx.......:.:..:..::xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 61800214 NA +3753 chr4 + 190214555 137833525 137833524 137833716 192 GGCAACAGAATGAGACAGAAAGAA-AGAGAGAGAGAAAGAGAGGGAGAGAGAGAAAGAAACACAAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAA------------AGAGAAAGGAAAGG-AAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGG chr4 + 94230402 17246045 17246044 17246250 17246045 17246044 17246250 206 GGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGGG ..:.::::.x.....xx...:x..-..x:::.........:..x......x:xx.:..:.:.x..x:x:..xx..::x.::..xx:...:..::...:.:..:.:xx.xx..x:.::...:..:x....x.:x..:....:...x..------------..x..:.:.....:-....x..:.:..x:xx::x.:.....:x.... 24M1I122M12I14M1I32M 113/192 58.9% 206/94230402 0.0% 14/192 7.3% 120587480 69627075 +4344 chr4 + 190214555 137833546 137833545 137833764 219 GAAAGAGAGAGAGAAAGAGAGGGAGAGAGAGAAAGAAACACAAAGGAAGG-----AAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGGAGGAAGGAAGGAA---GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 + 94230402 65771126 65771125 65771340 65771126 65771125 65771340 215 GAAAAAGGCAGAGGAACAG-GGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAG-------GAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGA----GGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ....:..:x....:..x..-..x.:.x.:...x.......:x.:.x.:..-----......x.xxxx:::...xx...-------....:....:x.:x:.:.......:..:x.x.:...xx.:..:.....::..xx.:..x:...:x.:.x.xx....----..:......:..:x...x.....:---:...:.x.:x..x:...xx..x..::..::..x.. 19M1D30M5I23M7D76M4D24M3I35M 132/207 63.8% 215/94230402 0.0% 20/207 9.7% 72062420 NA +3630 chr4 + 190214555 137833551 137833550 137833668 118 AGAGAGAGAAAG----AGAGGGAGAGAGAGAAAGAAACACAAAGGAAGGA--AGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ...:...::...----....:..................x..:xxx..:.--::..x.::.x.x:...:.x....:.:...:..:....:.x..:..x..x:xxxx:...x.x...:...::.. 12M4I34M2I72M 78/118 66.1% 124/94230402 0.0% 6/118 5.1% 86685172 NA +4563 chr4 + 190214555 137833569 137833568 137833819 251 AGAGAG-AGAAAGAAACACAAAGGAAGGA---AGAAAGA----GAGAGAG-AGAGAGAGA---AAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGGAAAGGA-AAGAGGGAGGGAG---GGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGAAATGTATGTCCTAGCCCAACAAGAGAGAGAAAGA-----GAGAATTCACCCTTTCTCC chr4 + 94230402 1317354 1317353 1317621 1317354 1317353 1317621 268 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGA-AAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGA---GTCTGTCTTAGCAAAACAATGGGGAGAAGAAATGCCAAAAACATGCCCATTCTTC ......-...:..:x......:xx.....---.......----:.:.x..-...:x:...---:..:.....:....:.x.:.....-.:...:.x..xx.:..x..:...x::.:.x:.:xx.:::.::.:....::..:..x.-...x....:.:.:---...xxx..:........:x:.xx:xx:.:.x....:::::..:xx.......---..x....:....xx.....x:.:.....::.-----:.:..:x::...x....:. 6M1I22M3I7M4I7M1I9M3I24M1D57M1I13M3I52M3D31M5I19M 158/247 64.0% 268/94230402 0.0% 25/247 10.1% 136516215 53698340 +3800 chr4 + 190214555 137833593 137833592 137833727 135 AGGAAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGG---------AAAGGAAAGAGGGAGGGAGGGAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGG------AGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ..:.....::..xx.x...........:.........x.:.:..xx...:xx::.:x.:..x.x:.------.:.:x:.......::............::.:---------:...x.x::...:......x.x.xx:..:... 66M6D31M9I32M 85/129 65.9% 138/94230402 0.0% 15/129 11.6% 86685214 NA +3108 chr4 + 190214555 137833620 137833619 137833717 98 AAGAAAGAAAGAAAGGTAGAGAGAGAGA---GAGAAAGAAAGA-------AAGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGGA chr4 + 94230402 58942132 58942131 58942239 58942132 58942131 58942239 108 AAAAAAAATAAAAAGGCAAAGGAAATGACCTGAAATCTCAACATATGGATAATAGCAGGAAAAAGAAAAGTGAGGAAAAGGAAGGGAAAGGAGCATGGAAGGGTGGGA ..:...:.x.:.....:.:..::.:x..---..:.xxxx..x.-------..x.:x..:...:.....:.x:...........:........:x:x..:....x.... 28M3I12M7I58M 67/98 68.4% 108/94230402 0.0% 10/98 10.2% 78891488 NA +4125 chr4 + 190214555 137833621 137833620 137833747 127 AGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAA------AGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAG-----GGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::.:xx::.....................x.:------....xx....x.::.x.x.:.:..x:.::....::........::.:.:.:x..-----x..:.x.x.........:..x:x.xx:..:... 40M6I54M5I33M 85/127 66.9% 138/94230402 0.0% 11/127 8.7% 86685242 NA +3470 chr4 + 190214555 137833625 137833624 137833751 127 AGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAG---AAAAGAGAAA-GGAAAGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGGAGG-------AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........:::xxx.x...........:.........x.:...---.:..xx....-....x:x::.:..x:..::..::...::.::.:.......x:-------:.:.x.x.........:..x:x.xx:..:... 43M3I10M1I42M7I32M 83/127 65.4% 138/94230402 0.0% 11/127 8.7% 86685246 NA +22182 chr4 + 190214555 137857602 137857601 137858069 468 AACATTTCCAGGGCTTAGTCACTTAAAAA--------------AATTGAAACGATGAAGACATTCTAAGG-AAATGCTGGACCTTCAAATGTATCTTACACTGA-AGCAAGCTTTTATGGCCTATTTTAAGAACTTAGTACTAGCTCTCTTGTTTAACGAGCAGTTTAATTTAAAGCTTAAAATTA---AGTATTCCAATGGAGTCGTAAATAATGCAGTTTATAATATTCTTATCAAGCACATAAAGATACATTTGTCTTCCATTAACAACATACTTTTAAAGTAGCTTGACCTCTTCAGATGTATAAGAGCACTCAATTAGTGCAATTTGTCACAGATCTTTTACATGTTAATAAGATGTAACTAAT----TGTTTTGTCTAATTAACTTTTCAGACACTGGCAGCTCTTGTTCTTTTAATACAAAGCAAGAGTGCCTTATTTGCAATTCTAATATTTGATGCAGAA--TTCTGACCA---TAAACTCAAGTCT chr4 + 94230402 29919088 29919087 29919575 29919088 29919087 29919575 488 AACTCCCCTAGGGTTTACATACTTGAAAATAACTGTATCTCTGAATTGCCAAAAGGGGAACA----AGGGCAAACAACAAACCTTCAAATTAATATTACATTGGCAGCAGGTTTTTACAGACTACTATCAGGGCTGTGTGCTGACTCCCTGGCTTAATGAACAGCTTGATTTAAAGCTTAAAATTATTAAGTGTTCCACCAGAGTCATAAATAATGCAGTTTATAATATTCAGATTGAGCACATAAAACTACATTTGTCTTCCATTAACAACGCACTTTTTAAGTAGCCTGACCTCTTCAGATATATAAGAACATGCAATTAGTGCAATTTGTCACAGGTCCTTTACATTTTAATAAGATGTAATTAATTGTCTGTTTAGTCTAATTAACTTTG-AAACCCTGACAGTTCTTGCTC-TCTAGTATAAAGCA--AGCTCCTTATTTGAATTGCTAATATTGGACAGAGAGTCTCCAAACCACAGTAAATTCAAATCT ...x:::.:....:...xx:....:....--------------.....xx.x:.x.:::...----.:..-...::x:::..........xx..x.....:..:-....:.:.....::.x...:.x.x..::..xx..:..::...:..x.:....:..:...:..:..................---...:.....x::.....:........................xx..::..........:x.......................::......x.......:..............:.......:..:x......................:..:.......x..............:....----.....x..............x-.:..x...:...:.....:..-.:..:..:......--..:x.........x.x.x........x..::x...:--.:.x:....---....:....:... 29M14I19M4D4M1I33M1I81M3I180M4I21M1D21M1D14M2D36M2I9M3I13M 360/460 78.3% 488/94230402 0.0% 36/460 7.8% 107938514 82276041 +3202 chr4 + 190214555 137859473 137859472 137859513 41 TCTATATTTTGAGGTTTTTGTTGTTGCTGTTGTTTTCTTTT chr4 + 94230402 77119761 77119760 77119801 77119761 77119760 77119801 41 TTTGTGTTTTGGGGTTTTTGTTGTTGTTGTTGTTTTCTTTT .:.:.:.....:..............:.............. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 60739712 NA +20149 chr4 + 190214555 137863964 137863963 137864303 340 TTGTCTGATTCT---AGAACACCCAAAAGGATGTTATATAACTCTTCTCTTGCTATACTGTATATAGACTGACAGGGACAGAATGAAAACCAAAGCAAATATGAGGTAAGAATGATTTTTTATTACTTTAGGTATTTCTAGATGTCAGATAAAAATGAGAACTTCGCTAAAAATTTTACAGAAAGACAGCTCTGCCTTATGGAGAAAATTCTATAGTTTGATATATGAGGCAGAAAATGTGAAAAATATTATGAAGTACTACCCTGACATAATGATGGAAAGCTGCTGAAAGTGTGCTAACACCA-AGAAATATAATAGACTAAAGTTAAAC-AAGGAAGAATGC chr4 + 94230402 29920360 29920359 29920701 29920360 29920359 29920701 342 TTGCATGACCCTCACAGAATGCCAAGTAAGGGGATATATAAATCT-CGCCTGCTATA--ACACAGACACTGACAGGGACAGAATGAGCACCAAAGCAAATATGAGGTAGAAATGATTTTTTATTACTTTAGGTATTTCCAGATGTCAGATAAAAATGAGAACATTGCTAAAAATTTTACAGAGTGACAGCTGTGCCTTATGGATAACATTCTATAGTTTGATGTATGAGGCAGAAAATGTGAAAAATATTGTGAAGTACCACCTTGACATGATGATGGAATGCCAAAGGAAGCATGCTCACTCTAGAGGAATGTAATAGACCACTGTTAAATAAAAGAAGGAAGC ...:x...::..---....::..x.:x.:.:x.x.......x...-.x.:.......--::.:.x.x...................:x....................::............................:.......................x.:.................:x.......x...........x..x...............:...........................:........:...:......:.........x..::xx.:...::....x..x.:.-..:...:........:.xx......:-..:....:.x.. 12M3I30M1D11M2D246M1I26M1I12M 279/337 82.8% 342/94230402 0.0% 8/337 2.4% 107943604 82270951 +3362 chr4 + 190214555 137887581 137887580 137887700 120 AATGACTTCATTCGTAACAGAAAG-----AAGAAAAATGAG---------AGGAATAAAGGAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAGAAAG chr4 + 94230402 49908251 49908250 49908384 49908251 49908250 49908384 134 AACAACCTTCCTCGTAACAGGTGACATTTAAAAGAAACCAGCTACCAGCTAAATGTAAAGGGGAAAAAAGAAAGAAATAAAGAAGAAAAGGATAAATAAATGAGGTAAAATGAAGGTTAAATTAGGAGGAAAGG ..::..:.:x:.........:x::-----..:.:...:x..---------.::x:......:...............x......::....:.x:.:x..:x:..:x.:..x...:.xx...xx.:...::..:. 24M5I12M9I84M 77/120 64.2% 134/94230402 0.0% 14/120 11.7% 87979330 NA +3492 chr4 + 190214555 137887599 137887598 137887718 120 AGAAAGAAGAAAAATGAGAGGAATAAAGGAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAA-GAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAGAAAGAAAGAGAATGGAAAAAGA chr4 + 94230402 14577297 14577296 14577406 14577297 14577296 14577406 110 AGATAAAAGGAAGATGAGAGGGATAAAAG-----------AGGAAGAGAGAAATGGGGAACTGAAAGAGTAGGCAGGAGAGAAGGGGTGAGAAAGGTGAGATGAGCCAGAGTTGAAGAAGA ...x.:...:..:........:.....:.-----------..:....:.....x:::...x-..:.:..x.:.x.:..:....:.::x:......:x:::.x..:xx...:.x...:.... 29M11D21M1I59M 72/109 66.1% 110/94230402 0.0% 12/109 11.0% 123310302 66904253 +3176 chr4 + 190214555 137890737 137890736 137890843 107 ATGTGTGTGTATATGCACATATATGTTTATAAACATATATATAACAGTGTATATAACAACATATATCTAACAAAATGTTGCCATTTTTTGTTTTACTTTTACAATGT chr4 + 94230402 81082182 81082181 81082282 81082182 81082181 81082282 101 ACGTGTGTATGTACATATATATATATTTTAAGGCATATATTTTACAGTGCATATAAAGACACGGCCCTAAT------TTGCCTATATCCAGTCTTCTTTCATTATAT .:......:.:..:::.:......:...xx.::.......x.x......:......x:...::xx:....:------.....xx.x.:::x.:.x....:.:x..:. 71M6D30M 65/101 64.4% 101/94230402 0.0% 6/101 5.9% 56808555 NA +3168 chr4 + 190214555 137893976 137893975 137894049 74 GTGCACCTGTAATCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATCACTTGAACATGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......:.::::........x.xx.x...x.........x::.:.:x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 61860772 NA +3543 chr4 + 190214555 137927269 137927268 137927336 68 ACGTATATCTGTGTATGTGTGTGTATGTATATATGTATACACATGCATACATGTTTTTCAGAACTAAA chr4 + 94230402 68837093 68837092 68837160 68837093 68837092 68837160 68 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCAGAACTTAA ....:.::x.....:.....::::.::x...:..::...........:....x...x........x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 69090176 NA +3322 chr4 + 190214555 137944867 137944866 137944951 85 ATATATATATATATATATATATATATACATACATACATACATACACACACACAGGTTAAGGTAAAACCTTTGATGTATATGTATA chr4 + 94230402 23247722 23247721 23247801 23247722 23247721 23247801 80 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACAC-----AAGGAAAAAAGTTACATGAATAAATATA ..:.:.:...::.:.:.:..x...:x.....::....:..............-----....x....xx..xx...x...x:.... 52M5D28M 58/80 72.5% 80/94230402 0.0% 5/80 6.2% 114697145 75517410 +15612 chr4 + 190214555 137982500 137982499 137982994 495 AAAAAAGTTGCTGTGTAATATAACTGTCAAGATTTAAATCATCCACATGAAACTGACTGTATTCAGATTCCAGAAATGTTTCAATTGATAAATACAGAAAATGAAAAAGGA--------AAAAAGAAAGTAATAATCCATGGTTACACAAGACAGCTGTACTCTTTTCTCTG-----GGCTTTTCTA-TTGTCAGTTTGATTAATGGGATGTCTTTAAATGTATCTCCTTTTGGATATCTTATATCTCAACAAGTCTATTTCATGTTTTTGCCACCAACATTTCCAGTAGATTTCTTCTAACATGTCAGAATGACAGATAAGTTTCCATAGTCAGCCTTATAGAGAGCTCATTATTGTTTCAAACCAGTGCAATTGCCCTTAAGTTTCCCTAACCAGAGGGCCTTTGGAGGGCCATGTCATTTCCAAACTCACGATGAGTAAAGGTGGCATTTCTGGGCTTAAAATAAGGGTATAAGTCACCAATTAAAGTCAAGTACTAATTTTTGCA chr4 + 94230402 29958563 29958562 29959030 29958563 29958562 29959030 468 AAAAACGCTACTGTGTAACATAACAGCCAG--------TCTTACACTGGAA---------------------------TTTTGATACACTAGCTCAAGAAGCAAACTAGAATGTATATGATAAAAATAGTAATGAGTCACACTATGGCTAGACAGCTGTGCACTTTCCCCTTTGTCCGGATTTCCTACTTGTTGGGTTGATTAATCAAATGTCTTCAAGCTTATCTGCTTTTGGATATCTTAAATCTCAACAAGTCCATTTCATGTTCCTGCCACCAACATTTCCAGTAGATCTCTTCTAGCACATTGGAATGATAGACAAGTTCCTGAAGTCAACCTTGCAGAGAGCTCATTA---TTTCAGACTTGTGTACTCACACTGGAGGTCCTCTGCACA-AAGGTCTTTAGAATTTTAGGTAATTTTTAAATCTATGTTGAGTAAAGGAGTCATTTCTCTGCT--AGAGAAAGCTTTGTAGCAGAGGTCAAAGCAAAGTTCTGCATTTTATA .....x.:.:........:.....x.:..:--------..x.x...xx...---------------------------...::..xx.:x.::x..::..:::..xx..:.--------.x...:.x......:.x:..::x.xxx:.x..........:.x....:.:..x-----..x...:...-....::.x.........x::.......:..::x.....x...............x.............:..........::.......................:.......:..::.::......:...:.....:.::x.....:....::.............---.....:..:x...:.x.::.x..x:..x.:.:..:xx..-.:..:....:..:xx::.x..x....::...:::.:.x..........x.x.......xx...--.:.x..:.x.x.:x:x..xx::.:....:x....x..:xx....::. 30M8D13M27D33M8I53M5I10M1I166M3D39M1D63M2D47M 316/454 69.6% 468/94230402 0.0% 55/454 12.1% 108023937 82190618 +3571 chr4 + 190214555 137983510 137983509 137983588 79 GTGGTGCACGCTTGTAATCCCAGCTACTTGGGAAGCTGAGACAGGAGAATTGCTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--....:.:...........::.:......x.xx.x...x::........:..:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 61950309 NA +3188 chr4 + 190214555 137986978 137986977 137987042 65 TGAAACTAGATACAAAAATTCTCAAAAAAAAAAAAAAAAAAACCAAAAACTAGCAAACTGAATCC chr4 + 94230402 13457170 13457169 13457234 13457170 13457169 13457234 65 TGAGAGCAGAAATAGGAATTCTGGCCAAAAAAAAAAAAAAAGCCAAAAAACAACCAGCTGAATTC ...:.x:...x.:.::......x:xx...............:.......x:.:.x.:......:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 124529808 65684747 +3394 chr4 + 190214555 137991333 137991332 137991406 74 GTGCACCTATAGTCCTAGCTACTTGAGAAGCTGAGACAAGAAAACCTCTTAAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:.:..........:.:......x.xx.x:..x.x...:.......:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 61958129 NA +5664 chr4 + 190214555 137996471 137996470 137996751 281 TTTCATTTCCTTAAAATATTCAGAGTTTAGCGTTTTGAAATTGAGAGATTTTTTTTCCATTAATTTACATGTCTGTGAGAATTTCCCATGGAAAGATTTTACTTCATAATTCATGTTCATTGCATTCTTTCTGATAA-ATCCACTTGCAGAAAAGAGACAGAGAGGCAAAAACAAAACTGCAGTGAATGAGTGGTTCTTTTG----TTTCTTCATCATTCCTTTGGGGAAGAATGCTTTACAGACATTTAAACAAAAATTTAAAGGTGGTTTTATTATTTTCCTAG chr4 + 94230402 29961737 29961736 29962012 29961737 29961736 29962012 276 TTTCCATGCTTCAAAACCCTTTGAGTTTAACTGTTAGAAGCTAACAGACTTATT--CCATTAATTTACATGTCTGTGAATGCTTCCCATACAATAAGTGTGCTGCATAATGCATGACTGTT-CATTC--TCTAGTAATATCAGCTCCCCAAAAAGGAGTGAATAGGCAAGGGGGAAGCTAAAAGCAATGGGCAATTATATTGACCTTTTTGGCATCAAGCTTT----GAATATTGCACTTGGAAAGTCTGAAT-AAGGTCTAGGAGAAGCAGTGCTGCTTTCCTAG ....xx.x.:.:....:x:.:x.......:.xx..x...::.:.x...:..x..--......................:x::.......:x..x:.x.x.:..x......x....x:::..-.....--...::...-...x:..:x.x:.....::::::.x......:::x:..:..:x.:xx....:.:::..x.x...----...:xx.....xx.:..----...x.x...x:.xx::.x:.:.:..:-..::.:..:::.x:.:xx.::.::........ 54M2D65M1D5M2D8M1I64M4I17M4D26M1D32M 168/271 62.0% 276/94230402 0.0% 15/271 5.5% 108034734 82179821 +22858 chr4 + 190214555 138014617 138014616 138015105 489 AGCTTTCTTGAGTAGTTG-AGTTTACATTTCATTGCCTTCTCAATTCATTACACAGAGCAATTTTACTTAGCCAAAAATTA-TTTTTACAGT-------GTTTTTGTAAAAAGTCTAACTACTAGGGAATATGCAATGACTGCTTATAGCTACAGTCCTGGCTCATGATTTATTTTACAAGTCTTTCCTCACAGTTCTTCGCTAAATGGACATTCTTTGTGTTTTATTACAAGTTTCTTCCATTGCATCATGCTCTCGGTGGGATGGTGTGCCTATATTTTATTTTACTCCCGCCATTAATTACC-TGTGGGCCTATATCATGTCTCCCTAAGACCCATTTATTATAATGGTGCCTGCTGGTGTCCCTGCAGCTAGCAGTCTGTCAGCATTTCCATTAGAAACCCCATTTCACAGGGGCTTAAAATTCAGCTGTAAAATTGTGCTTTAGGCTGTACATGTTTAAAGTACATGGTATGAGCTATGAAACTCCTTATTTTT chr4 + 94230402 29973261 29973260 29973754 29973261 29973260 29973754 494 AGCTTCTTTGCATAGGTGCACTTTGCATTTCATTGC-TTCTCATTTCATTATACAGTGAGATTCTGCCTTGCCAAAAATGGCTTTTTATAGTTGAGGAGAGTTTTGTAATCC-TCTAATTTAAAAGAAACATACAGAGAGCTCAGCTAGCTCTAGTGCTAGCTCATGATTTATTTTACAAGCAGTTTCACACAGCTCTTTACTAAACAGACGTTCTTTGTGCTTTATTACAAGTTTGCTCCATTGAGTCATGCTCTCTGTGGGATGCTGCGTCTATATTTTATTTTACTCTTGCCATTAATTACCTTGTGGGCCTGTATCATGTCTCTCTCAGTGTCATTTATTATAACGGCGCCTGCTAGCGTTGCTCAAGTTAAGAGGCTGTCAGTATTTCCATTAGAAAACCCATCTCTCTGGGGTTTGTAAGTCAGCTGTAAAACTTTACTCCTGGTTG---ATGGTTGGCATACACGGCCACAGCCAGAAGGTTTCTTTCTTTT .....::...x:...x..-.x...:...........-......x.......:....x.x:...:.:.:.x.........x:-......:...-------:x........xxx-.....:.xxx.:.:..:..:..:x..x:x.xxx.....x:...x..:.....................:xx..:.x.....:....::.....::...:.........:..............x:.......x:..........x........x..:.:..................::.............-.........:...........:..x..xx:............:..:.......:.:..:x..xx..:..:x..x.......:..............x.....:..x.x....:..:x..x............:.x.:..::x..:..---...x..::x:....:..:xxx...:.x:.:::.:...x:.... 18M1I17M1D44M1I10M7I13M1D192M1I147M3D43M 365/484 75.4% 494/94230402 0.0% 15/484 3.1% 108041356 82173199 +3403 chr4 + 190214555 138032972 138032971 138033024 53 TTTTTACCTTCTCTTTCCTT---TTTTTTTTTTTTTTTGTGGTTGTTGTTGTTGTT chr4 + 94230402 82090601 82090600 82090656 82090601 82090600 82090656 56 TTTTTTCCTTCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTTGTTGTT .....x......:.......---.....::.:........x....:.......... 20M3I33M 46/53 86.8% 56/94230402 0.0% 3/53 5.7% 55942371 NA +3323 chr4 + 190214555 138034431 138034430 138034513 83 CGTGGTGGCACGCGCCTATAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::.:..--.:....::..........::........x.xx.x...x.:........:..:..x:xx:..:...:. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 62001234 NA +8147 chr4 + 190214555 138046246 138046245 138046636 391 AGGAGTCAATATCCTTGAAACTCATAAAAGTGATTTAAAGGAGTGTTTCAAGTCCAAGTTGTCTTTCCCTTT------------CATCACACT-GGAGCACCTTGTTAAACAGTAAGTAATGGT---AAAAGAGCATTTAACAATCTGCTTCACGTGCACCTCTTTTCCAGCCAAATTGCACCTACAAAGCTAAAACAGAACCTCTCTGGATTCTCAACAAACATGAACGGAATA-TTTTATGGTTTGTGCAGTAGTTACAGTGTGTTGCCGTTTCTTAATTAGCAGGTATATGGATGCCTGTCTTTCATCTCACGTTATTATTGTTGCAGTAATTCAATAAAAGTATCCTAAGCATTTACATTGTGGAG-CATTTTTA----TGATTT-----ATACCAACAGAATGGCATACACAG chr4 + 94230402 29986997 29986996 29987397 29986997 29986996 29987397 401 AAGAGTTAGCATACCAAAATATAATGGAA-TGATTTAGAAAAAT-CACCAAGAGCAATTTGTACTTTTCTCAACAAATTAGAGACATTGCACTCAAAGCAGCTTGTTAAGCATTAAGTAACGTTTTTAAAAAGGTATTTAACAATCTGCTACTTATACTACTCTTTTCCAGCTAAATTGCACCCATAAAGTTATAGTAGATTTGCTCTGGAATTACAGCAAGCATGAGCTGCATGTTTTTATTACCTGGGAGATGGTT--AGCATATTATACTTCAATAACTA-CACATATACAG----TTTTCTTTCCCTGTACTTTATG--------AACAACCCAGCAAAGTCATCTTATACTTATGCATCATGAAATTACTTTTAACTCTGATGCATCAGATACCAGAAAGTTGGCATGCTCAG .:....:.::..x.:x:..xx.x..::..-.......:.::.:.-:x:....xx...x....x:..::..:x------------...::....-::....x........:..x.......:.x.---....::.:...............x.x::.:.xx............:..........:.:....:..x.::...x::x.......x.:x..:...:.....:.x.x..:-......x:::..x.x::.:...--..::.:..::xx..:xx...:..-..x:....::.----:.x......x::x:..x....x--------.::..::..::...:x:...:..x:.x.x.:...::..:.:-:.:.....----....x:-----......:x.::x......:.x... 29M1D14M1D27M12I9M1I30M3I108M1I22M2D23M1D11M4D22M8D41M1I8M4I6M5I24M 243/374 65.0% 401/94230402 0.0% 44/374 11.8% 108059249 82155306 +5491 chr4 + 190214555 138051654 138051653 138051872 219 AAGCCTTGCTCTGTAGATTGTTTGAAGGTTGCTATTGCAACGCTTGAAAATCAAATA--TAATGTAGAAAA------ATTAAAGTCTGGTTAAGGTCCGTTAATTATAATGCAATGCTTCAGCCAAACAACAGCTTGGC----TTTAAATCAATACCCAATTAAATAGTTCCTGCAGTTCTAGTCATTAATTGCTCTGTAGCTTAAAAAATAACATTCTAACTACTTATAG chr4 + 94230402 29992158 29992157 29992382 29992158 29992157 29992382 225 AGACCTTGTTTTATTATTTTTTTTAAAGCAAAGGTTAAA-----TGCAGATTAAATACCTATTGCCTAAAAGCCTCTACTAAGCTCAAGTTAAAGACCATTCAACAGATTCTAACTACTTAAGTAAGCAACAATTAGTACTCATTTAAATCAATACTCATTTAAATACTTCCTGCAGTCTTAGTCATTAATTGCTTCACAGA-AGAAAAATATCATTTTAACTGCCTGCAG .::.....:.:.:.x:x..x...x..:.:x:xx:..:x.-----..x.:..:.....--..x..:xx....------.:...:x..x:.....:.x..:..x.x:.x.x.x:..:xx:.:.:x:..:.....::.x.xx----.............:..x.......x..........::...............::::..x-x:.......x....:.....:.:.::.. 39M5D13M2I12M6I62M4I59M1D28M 140/213 65.7% 225/94230402 0.0% 18/213 8.5% 108059496 82155059 +3132 chr4 + 190214555 138067217 138067216 138067263 47 AAAAAAAAAAAAAAAAAAAAAAAGATAAAGAAATTAATGCAGCAAGA chr4 + 94230402 58527231 58527230 58527277 58527231 58527230 58527277 47 AAAAAAAAAAAAAAAGGAAAAAAGATGAAAAGATCAATGAAGTGAGA ...............::.........:..:.:..:....x..::... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 79539986 NA +3609 chr4 + 190214555 138069910 138069909 138069983 74 GTGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::........x.xx.x...x.x........::.:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 62036706 NA +3243 chr4 + 190214555 138079556 138079555 138079624 69 TCTCTGTCTCTCTCTCTCTCTATATATATATATATACATACACATACACATATACACACACACATATAT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.x...x...........x.:.:.......:.::.......:..:..:.:x:x:.x.:....x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 77248026 NA +4132 chr4 + 190214555 138079556 138079555 138079631 76 TCTCTGTCTCTCTCTCTCTCTATATATATATATATACATACACATACACATATACACACACACATATATTTTAAGC chr4 + 94230402 60831534 60831533 60831609 60831534 60831533 60831609 76 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGC ...................x.:.......:.:......:....::....x.x..x.:...:x:....:x.:.:x.. 76M 57/76 75.0% 76/94230402 0.0% 0/76 0.0% 77248022 NA +3471 chr4 + 190214555 138079558 138079557 138079624 67 TCTGTCTCTCTCTCTCTCTATATATATATATATACATACACATACACATATACACACACACATATAT chr4 + 94230402 60831534 60831533 60831600 60831534 60831533 60831600 67 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.x.............:.:.......:.:..:.:.....::....:x.x:.x.:...:x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 77248024 NA +3096 chr4 + 190214555 138079575 138079574 138079647 73 CTATATATATATATATACATACACATACACATATACACACACACATATATTTTAAGCTTAGTTCAGCTCCACA chr4 + 94230402 9193575 9193574 9193647 9193575 9193574 9193647 73 CTTTCTGTGCTTACAAACCTATATATATATATATACACACACACATATGATATAAACCTGATTTAATTCAACA ..x.x.:.::x..:.x..x..:.:...:.:..................:x.x...:.:.::..:.::..x... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 128886000 61328555 +22548 chr4 + 190214555 138090000 138089999 138090486 487 TTTTTCATTTTTTCACTGGTGTGAAGGAGCACAGTCAC----TTAGCGAAAGAACGA---CCTGCGGCTAAAG-GGAGC-----GAAGAA--------GAAAGGAGCAGGCCAGCCTGGCCTTTCTCTGTGGCCTGAAACTGCCTAAAGTTAATTGCTCACATAAGAAGAATAA-CTCGTGGTGCTGTAATTGAATTTTTATGGAAATAAACAGGTGGCAGATTTACTATAGCTG-GGGGATAGTAGGGGGCGAAATGCTGTAGCCACATTAACCTGTTTAATTTAATAGCTTCGGTACTCATAGGGGGGAAAGAAAAAAGCAG------TGTTGCTCTTTGAGTCAGTTGGATGCCAAATGTAAATAACTACAGTTACCCTAGCATGCCCAAGTGGTTGAGCAAAAAAGGGCTTTGTGCCAGCTTCAACTTGGTTTTCATGTTTATTAATTAAGCTCCTGGAAGTTTCAAAAACAG---------AAGTTTTAACTCACAAAGAACTGGGAAAAAAAGGAAGAG chr4 + 94230402 30002006 30002005 30002517 30002006 30002005 30002517 512 TCTCTCATTTT----CAAGTAGCATGGGGCTGAGACACAGCTTTAGCAAAAGAAAAAAAGCTTCTAGCTAAGGAGGAGCTTCAGACAGAACAGCTTTGGAAAAGAACAGGTCAC----GCATTTCTTTG-AGTCTGATACTGCCTGAAGTTAACAGCTCACATAAGAAGAATAAACTGGTGCTGCTGTAATTGAATTTTTATGGAAATAAACAGGTGGCAGATTTACTATGGCTGCGGGGATAGCAGGGGGTGAAATGCTGCAGCCACATTAACCTGTTTAATTTAATAGCCTCTCTACTCCAAGAGAGAGGGGAAAAAAATAGATACTGTGCAGTTAGTTCAGTCAGCTGGATGCCAAATGTAAATAACTACAATTACCCTACTATGCCCATGTGCTAGATGAGAAAGAGAGTTCATGCCAACTCTCACTTAGTTGTCGTATTTCTTAATTAAGCTCCAGGAAGTTTAAAAAACAGCAACAACAAAAGTTTTGATTCAAAAACAA----GACACGGAGGAGGAG .:.:.......----.x:..:xx.x..:..xx..x...----.....:......x:.---.:.x::.....:.-.....-----:x....--------....:..:....:..x----..x.....:..-:.:....x.......:.......:x...................-..x...x................................................:....-........:......:.........:.............................:..xx.....xx..:.:.::::.......::..------..:x.:.xx..x......:.........................:........x:.......x...x.x..xx.:...::.:x..::.....:..::x....:...x..:.:...x.............x........x........---------.......:.:...x...x..----..x.x::....:... 11M4D23M4I15M3I13M1I5M5I6M8I16M4D11M1D44M1I60M1I88M6I147M9I20M4D15M 379/474 80.0% 512/94230402 0.0% 51/474 10.8% 108087994 82126561 +15930 chr4 + 190214555 138098272 138098271 138098595 324 GCTAGAAGAGAAGAATGTTTCATCAGAGACAGTCATTCATCCTGGCCCACACCTCTCCTGCTCTGATCTTCCACTGTTAAAAG-CATAACACACTGGAGGAAGATTGTGCTATATTTCATGCATGCTCTGCGCCACCACCAAGGGACAGTCCCATCTGTTATTTGCTCTCAGCTTTGCTTACTGATAAAACAGGAAGGACAGCTTGCTGATGGGCTCTTTGAAGCAAATGGATCCTCTCTTTCCTGGAATTAATGTTTATAAATTA-TTTCTACAGTAGACAGCATGTATGGTACCATGATTTCAAAATTAGTTTCAATAAATTAA chr4 + 94230402 30007470 30007469 30007780 30007470 30007469 30007780 311 GCGGGAGAAAAAAGATCTTTGATCTGAGCTATTTATTCATCCTGCCCCACACCTAG------------TACTACTGTTAAAAAACATAGCACACTGGAGGGAGATTGTGCTATATTTCATGAACATTCATTGCTGGCGCTAAGGGATGTACCCATCTGTTATTTGCTCTCAGCTTTGCTTACTGATAAAACAGGAAAGACAGCTTGCTGATGGGCTCTTTGAAGCAAA--AAGCTTCTCTTTCTTACAATTAATGCCTCTAAATTATTTTTTTCACTAGACAGCATGCAGCCTACC-TCAAACCAAAATGACTTCTACTAAATTAA ..x:..::.:..::..x...x...x...x:.x.:..........x.........xx------------.x.:..........:-....:...........:....................x.:::..xx:..::x.:.:......::xx..............................................:...............................--:.x.:........:.:x........::.x.......-...:.x..x...........:.xxx....-.x.xx:......x.x..::.x........ 56M12D15M1I144M2D36M1I29M1D29M 245/309 79.3% 311/94230402 0.0% 17/309 5.5% 108090802 82123753 +3055 chr4 + 190214555 138109864 138109863 138109921 58 TACTTTCATTTATTTAATTAATTTTGTTTTGTTTTGTTTGTTTGTTTGTTTTTTTGAG chr4 + 94230402 29671930 29671929 29671987 29671930 29671929 29671987 58 TATTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGGG ..:..x:x.....x:.x..:x...x.....x.......................x.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 108437934 81776621 +3332 chr4 + 190214555 138121451 138121450 138121530 80 GAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAGAAAAAATATAAGAGATGGTGGTGAGGGCAA chr4 + 94230402 84435417 84435416 84435496 84435417 84435416 84435496 80 GAGCCACACAGTCTTTCTACAAATTAAAAAAGAAAGAAAGAAAAAATGCAAAAAAATAAAAGGGGTGGTGGTGGTGGTAA ....x.x..xx:x.:..x.x...xx......::..:..........x:x:........x...:.:........:x..:.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 53686034 NA +3226 chr4 + 190214555 138121471 138121470 138121521 51 AAAAAAAAAAAAGAAAAAAGAAAAAAAAAGAAAAAATATAAGAGATGGTGG chr4 + 94230402 27719997 27719996 27720047 27719997 27719996 27720047 51 AAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGATTGAGG ..:..:....:..:............:...:.:.....x.......x.x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 110401474 79813081 +3065 chr4 + 190214555 138135374 138135373 138135447 74 TATATAAACATATATATGTTATATATAACAACATATGTTATATAAACAACATATGTTGTATATATAACATATAT chr4 + 94230402 91205973 91205972 91206046 91205973 91205972 91206046 74 TACGTATACATAGATATGTAATAGATTTGATGATAAAAAATATAAACTATATATATAGTATATATAGCATATAT ..::..x.....x......x...x..xxx.xx...x:xx........x.:....:.x.........:....... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 46929401 NA +5347 chr4 + 190214555 138141770 138141769 138141899 130 CATTTCTAAATCACATTTATTT-------CATAACGTTAAACTCAAGCCAGATGAAATCCCT----------------TGACAAAGGAATCGAACAAGTCCAAATTGATCTCTTAAGTAGATCAATAGAAACTTAACTGAAATGGATTGGGGA chr4 + 94230402 30020001 30020000 30020148 30020001 30020000 30020148 148 CATTGCTAAATTACTTTTTTTTTTTTCCCCATAACTTCAATCT-GAGACAAATGAAATCCCCCATTCCACCTCCCACCTCAAAAAATAATCAAA----GCTAAATTGATCTAATAGGTGGATCAATAGAAGCTTAACTGAAATGGATTGGGGA ....x......:..x...x...-------......x.:..x..-:..x..:..........:----------------.x.x...:x....:..----x.:..........xx..:..:...........:...................... 22M7I14M1D18M16I16M4D55M 102/125 81.6% 148/94230402 0.0% 28/125 22.4% 108121769 82092786 +8911 chr4 + 190214555 138141927 138141926 138142048 122 CTAATAAGATCACTTCCAATTCACACATATAGAACTAAATTTTCAGCACAAATTGATCTGATTACTAAGGATGAATGGTCATCTTTAATAATGGATTAAGGCGGTAAAGATTTCTTTTTTTA chr4 + 94230402 30020632 30020631 30020753 30020632 30020631 30020753 122 CTAATAAGATCGCTTCCAATTCACACATATAGGACTAAATTTTCAGCACAAATTGATCTCATTGCCAAGGATGAATAGGAACCTTTAGTAATGGATTAGGGCTGTAAAGCATTCTTCTTCTA ...........:....................:..........................x...:.:..........:.xx.:.....:..........:...x......xx.....:..:.. 122M 106/122 86.9% 122/94230402 0.0% 0/122 0.0% 108121295 82093260 +3097 chr4 + 190214555 138170211 138170210 138170280 70 ATATATATATATATATATAAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACA chr4 + 94230402 6083150 6083149 6083219 6083150 6083149 6083219 70 ATATATGCTTCTCCCTATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACA ......::x.x.x:x....x.x:.............:.::..:.:.x.:.............:x.x:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 132087061 58127494 +3198 chr4 + 190214555 138170221 138170220 138170280 60 ATATATATAAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACA chr4 + 94230402 55892172 55892171 55892231 55892172 55892171 55892231 60 ATTTATTTTAAAAGTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATA ..x...x.x..........x...:.:.x...:.x......:....x...:....:...:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 82278049 NA +3392 chr4 + 190214555 138170229 138170228 138170282 54 AAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACA chr4 + 94230402 68837090 68837089 68837143 68837090 68837089 68837143 54 AGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .:..x.....:.............:.:.:.x...:...:...:...::...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 69333139 NA +3685 chr4 + 190214555 138170235 138170234 138170302 68 TGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACACACACACACATACACACA chr4 + 94230402 85834547 85834546 85834614 85834547 85834546 85834614 68 TGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...................xx..:..x::...:....::.x.:...:::x:.::.............. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 52335688 NA +3104 chr4 + 190214555 138170238 138170237 138170281 44 GTGTGTGTGTGTGTATATATATATATATATATATACACACACAC chr4 + 94230402 24295791 24295790 24295834 24295791 24295790 24295834 44 GTGTGTGTGTGTGTATATATGTATATAACTAAATGCATACACAc ....................:......xx..x..:..:...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 113874447 76340108 +3685 chr4 + 190214555 138170239 138170238 138170322 84 TGTGTGTGTGTGTATATATATATATATATATATACACACACACACACACACACACATA-----CACACACATATATATATATATATAAT chr4 + 94230402 23247723 23247722 23247811 23247723 23247722 23247811 89 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAAT .......:..:::.:.:..x...:x.:....:........:...........x:x.x.-----:...::x...x..........:x... 58M5I26M 61/84 72.6% 89/94230402 0.0% 5/84 6.0% 114922516 75292039 +3036 chr4 + 190214555 138170253 138170252 138170292 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 133761171 56453384 +3005 chr4 + 190214555 138170255 138170254 138170295 41 TATATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.............:.........x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 133761173 56453382 +15369 chr4 + 190214555 138179212 138179211 138180044 833 CTTACCCGACATTATTCTAAACCACCTGGGTTTCTTGTCCCATATAATAAAGAGATAATACGCAGGGACTCCAGTCAGAGTGATGACGAAGCCAATCCCTGTACTAAATGGGTCCGAATAGAGGGAAAGGGCAACCATGAAGAGGCATGTGAAGGAAAACAAAGCTGGGATGAACAGTGGCACCTGGAACACAG-AACACAAAAAA--GTCACTTCAAACATGTTCAAGCAACAGAAGCTGGGTTTGAGATGAGCGTGTCAGT--------CATGACATAT-----------ACTTTAGTGATATGCTGTAGTCATGCGAC----CAGGT------AACAGGCAC-CAACGTGCC-TTAGTAGCAAAATCTCTTTCATGGTGCACAGA---TAATGTATTAAAC------GTACTCCCTTAAATGTAATTCAACTTAATTTAAATTGTTTTTAAATCTTTGGCTAGAACAAACTCTAAGGACAAAAATGGATACTTTATTAGAGATGTTCTGTTGGAATTATTTTACTAGTTAAATGC-CATGATGATTTATGGTTTTGATTTTAAAAGACTGGCTCTTTGATAATTA-TGATTAGAACCCACTTTAATGTGGAGTCAAGAGCACCGGCTGCTTGTTACATGTTAAAGTCTTTCAGTGCATATTGATTTTTCTGTTGAGATCCACAATAATAACTGACAGGAATAAAACAAGCC-AACTCCTATTCAACCGCTAATAAAGATG-CCACCAGCATTAGGCAATGAATA-TTACTAGAAACAAATCCTGACAACATGACTGACAACCTTATCTATGCCATTTCTTAAA-AACAAATAAATC--GTGAGGTCAAATCAATCCATGAGTCAAGTCTGAAGAAGATGAC chr4 + 94230402 30039018 30039017 30039847 30039018 30039017 30039847 830 CTTACCTAAGAGCTTTCTGAACCACTTTGGTTTCTTGTCCCATACAATAAAGAGGTAGTAGGCAGGAACTCCAGTCAGGGTTATTGCGAATCCAATCCCTGTATTGACTGGATCGGAGTAAAGTGACAGTGCAACCATGAAGAGGCAGGTGAAGGAAAACAATGCTGGAATAAATAGAGGCACCTGGAATACAACCACACAAAGAATCATTACTT--GGCAT------------TGACCTTGCTGTTGAATGATAATGGTATTTAATGTTCCATGAAATGTAAACCAGATAAAACTCAGCAGTACAGGATAGTCCTGGAGAAATGCAGGTCTCTAGAAGAGGCACACAAAATGCCAGTGACTGCAGGAAC-----CAAGCTAAGCCGACTGCTACGCAGTAAGCACCACAGAAGTCTTTTAATTACACACTAAAACA--CTAGAGTGTTTTATGCCCTTT----------AAATGTAAGGGCTGTAA-ATATGTTACATTACAAAATTCCTTTCTCTAATCCTCCAGCAGATAAGTAAGCAGCACTAACTGCAGT----------AAAGATTTCCTCTTTGATAATTACCTATTAGAAAACATTTTAAAACACAACACGGAGCTCAAGC-------CACCTTTTAAAACTATTAAGAAGATATTGATTTTCTTCCTAAGGTAAAAATCAAAATCTGGCAGGAAGAGAGCAAATTAAACACCCATTTGACTACTGATAAAGATATTTGATACCATTATGCAACTGATAGCTTCTGGAA--AAGCACTGACAATATGACTGGTGGCATTATCAGTGTCACTGTTGAAAGGACAAAAAAACCCAGCAATATCAAATTAATTCTC---TCAATTCTGAAGAACACCAC ......::.x.x:x....:......:.x................:.........:..:..x.....:...........:..x..x:....x............:.:.x...:..x..:..:..x..x..x.................x..............x.....:..:..:..x...........:...:-x.......:..--:.:....--::...------------x:.x..x.x.x.x::....xx:..x:.x.--------.....x..:.-----------.x:.:..:::..::xx:.....x..x::x----.....------..x......-...x:....-x.:::x...::.x.-----..x.x.:x:.x..---:x.:.:.x...:.------.x.x..::....x.::.xx::..xx:.--:..:.x......xx:x:....----------..x.x.....:.x:x..-:x..::.x:....x.:.xx.:..x.:xxx.x.x:.::.x:..x...:.:x-..xx.:x.x:.:::..----------.....:.xx..............-:x.......xx..:.....x:::x.::xx:....x.x:..-------:..x.x.....:::x..x..x:x...........::.x:.:..:.xx.x.x:..x.x...:......x.:.:...:::-...x..:...::..::..:........:-:::x:.x.....x....:x:...-:.x..:...--..::x.......:.......::::.x.....x:..:..:.x:.x...-:.....x...:.--.::.x:......:...:.x:---....x.........x.:x.. 194M1I11M2I7M2D5M12D29M8I10M11I29M4I5M6I9M1I9M1I14M5D13M3I13M6I27M2D21M10D17M1D50M1I16M10D23M1I40M7D78M1I28M1I23M1I9M2D47M1I12M2I20M3D20M 512/779 65.7% 830/94230402 0.0% 105/779 13.5% 108140194 82074361 +12278 chr4 + 190214555 138180587 138180586 138180802 216 GACTAGGTATTAG--------GAGAGAGATTTATGTAAACCCATCAAGATTGCTGAGGTTACCTTGAAAGGACGATGCATATCTGGGCATTTGTATCGAAGATAAATCAGCCCAGCAACTGCCAGCCCAATAAAAAGCCACCTGGCAAAACTGAGGAAATTCAAAAGACTGTCGAGGTCTCCAGAGAAGAGCATTATCATTGTCAAAGGGTGCTGAGGGGGGAA chr4 + 94230402 30040830 30040829 30041051 30040830 30040829 30041051 222 GACTAGACAATAGATACAAGGGAGAAAAATTCATGTAGAACAGTATAGA--GAGAAGGTTACCTTGAAAGGACGAGGCATATCAGGACGTTTATATCTGAGATAAATCAAGCCAGCAACTACCAGTCCAATAAAAAGCCACCTGGCAAAACTGAGGAAATTCAGGAGGCTGTAGAGATCTCCACTGAATAACATTATCATTGTGAGAGGGTGCTGCAAAAGAAA ......::.x...--------....:.:...:.....:.x.x:.xx...--.xx:....................x.......x..:.:...:....x:..........:x.........:....:.....................................::..:....x...:......xx...x.:............x.:.........x::::.:.. 13M8I28M2D173M 171/214 79.9% 222/94230402 0.0% 10/214 4.7% 108139757 82074798 +10892 chr4 + 190214555 138182160 138182159 138182421 262 CTGCCT--CCCAAACTCCACCATGACATACATTAGCAATGAATGAGAAAGTAAAATACTATCTAATGTCTGGTTGGAATTCCTTTTTGCTAACCTATTATTCAAGGTTATATCTAGATATACTTGTTAATATGCATTACCAAAACAATAACAGCTGGTAGAGGAGTGTGCTTGCGGACATGAATCATGGAGAGGATTTCTGGAAGGTGACCCTCTCGAGACGCAACATAGAATAACCTGATGGGAGAGAAATGTGGGTGGAGTT chr4 + 94230402 30043719 30043718 30043972 30043719 30043718 30043972 254 CTGCCCTGCCCAAAGCCCGC----ATATACATTA---ATAAATGAGAC--TCAAGCAGTGCCCAAATTCTGTTTG-AATCCTCCAGAGCGAGCCCGTAATATGAATTCTTGTGCAGGAACATTTGTTTGTATGATTTACCAAAACAATGACAGCTGGCAGAGGAGTGTGCTTGCGGACATGAATCATGGAGAGAATTTCCGGAAGGTGACCCTCACGGGAGGCAACGAAGAACATCCTGGTGGGAAATAAATGTAGACAGACTT .....:--......x:..:.----.:........---..:.......x--.x..::.x.::.:..xx....x...-...:.:::xxx..x.:..::.x..x::.:x.:x.:.x:..:x.:.:.....x:....xx.............:........:...................................:.....:..............x..:..x.....:x....:.x....:.....:.x......:.:::..x.. 6M2I12M4D10M3D11M2D25M1D188M 186/252 73.8% 254/94230402 0.0% 12/252 4.8% 108138441 82076114 +7696 chr4 + 190214555 138183192 138183191 138183321 130 ACTCACTCACCTGGAGACAGCAAACACACCACCGTTCATGGAGCCAAAGCAGGAGAGGGCAACAAAGATCGGAACTGCTAATGAGAAATTTCCCAGTAGCCGCTCAGAAAAGGTCTAGTGAAAGAAAGAA chr4 + 94230402 30044436 30044435 30044565 30044436 30044435 30044565 130 ATTTACTTACCTGGAGACTGCAAAAATGCCACCATTCATAGACCCAAAGCAGGAGAGAGCAACAAACACCGGTACAGCCAAAGAAAAGCTTCCCATTAATCGTTCAGCAAAGGTCTGTTGGAGGAGAGAA .:.:...:..........x.....x.::.....:.....:..x..............:........x.:...x..x..:..x..:..::......x..::..:....x........:x..:.:..:.... 130M 100/130 76.9% 130/94230402 0.0% 0/130 0.0% 108138756 82075799 +9513 chr4 + 190214555 138185095 138185094 138185315 221 TTGGCATTTTCCCAACTTGGACTTACCACTGCCACTGCATTTGAAAGCAGCAGCTCCTCAGCATTAATGGTCGTAAAGTAGGCCACATTTGTCAGCACATAGCCAATGGTGACAATGGCCATGGATATACATATTGCAAGGGGAATGGTTCTGAAATGCACAAAGGAATCACTTATTCATTATCTTTTGTTAGCCATTCTCTGATACCGAA--GAAAATAACA chr4 + 94230402 30045698 30045697 30045917 30045698 30045697 30045917 220 TTTGTATTTTTCTT-CTGTAACTTACCACTGCTACAGCTTTTGAAAGCAGCAATTCCCCAGCACTGATTGTAGTGAAATAAGCCACGTTTGTTAACACATAGCCAACTGTGACGATAATCATTGAAATGCATATTGCGAGGGGTATGTTTCTGAAATACACAAGGTAGCTCATTATT--TTGCAATCTGGTTGCTATCTCCTGAACATGAAACAAAAAGAACA ..x.:.....:.:x-..xx:............:..x..x.............::...:.....:.:..x..x..:..:..:.....:.....:.:...........:x.....:..:::...x..x..:........:.....x...x.........:.....:.x.:::xx.....--..::xx.:..x.x..:..:::....xxx:...--:....x.... 14M1D162M2D32M2I10M 157/218 72.0% 220/94230402 0.0% 5/218 2.3% 108139397 82075158 +6759 chr4 + 190214555 138206567 138206566 138206766 200 AAATAGCTTCCACAAAGCACTTGAAGGATTAATATCTGTCTTCTTTGATTACCCCATGATAAAATATTATAATATAATCCTATAATTTCTGCACCACTTATTTGACACTTCAGCCTTATATGAACAAACTATCTTTGGGCAAAATGTATTTTTTATGCATATGTGATGCCGAGAAATGCAAGAA---TTTTGATCCCAAGGTA chr4 + 94230402 30062994 30062993 30063183 30062994 30062993 30063183 190 AAATGGGCTTTGCAAAATAGCTGAAAGATTAGCATTTGTCTCTCCCGATTATCTCTAGATG-------------TAATCCTATAATTTCTGCACCGAATATTTGGCACTGTGGCCCGACATGAACAAAACAACTTGCAGTCAAATGCATCTTTTACGAGGAAATGGAACAGAATAACACAAGAAAGGTTTCAATCTCCAGGTA ....:.x:.:::....::.x:....:.....::..:.....:::::.....:.:.xx...:-------------.....................:xx......:....x::...:x.:.........x:.x...xx:.:x.....:..:.....:.x:x.x:..:x:.x..:x..::......---...::...:.x..... 61M13D110M3I16M 125/187 66.8% 190/94230402 0.0% 16/187 8.6% 108143573 82070982 +3920 chr4 + 190214555 138207565 138207564 138207634 70 CATAGTGGCACATGCTTGTAATTCCAGCTACTTGGGAGGCTGAGGCATGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....::..:.--....:.............::........x.x..x...x..........::.:.. 14M2D54M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 62174368 NA +23223 chr4 + 190214555 138208095 138208094 138208556 462 GTTTTCATTGGTACAAGGTGTGATGACTTTGAGGCATCAATTAATATAAACTGGAAGTAGGCAAAGTATTAATTAAACATGACACTCTGATTATTTAAACCTTCTATTAAAGTTGATTATTCAGAGCGTGTTGATAGCCTGTTTTTCAAAAATGACTGATGATATCAAGGTTTACTGACTTCCTCTAAGTCTACTATTTCCAGCT-CTTCAAAACAGAAGGAATAAATGAAGTGAGAAGAACACTGGAATAAGGCTAATAGACAAAGTGGCTAATCTCAGACCCCCAAGGTCAAAGAAAAGCAATTCATTTCTTGGCTTT-CATCAACACAAGATATGATTTATCAATCTAAGAGCAGGATTACAAACATTATACATCTCAATGATATGTTCTTTGCACTGTGTAACTTTTTGAACAATGACAGATTGCATAGTCACCACAAAAGTCATGTCATAAGGCAAAAT chr4 + 94230402 30064202 30064201 30064658 30064202 30064201 30064658 457 GTCCTCCTAGATGCCAAGTGTGA---CTTTCAA-CTTTAATTAATACAAA-TGGGGGTACGCTTTAGATTAATTAGACACGACACTCACATTATTTAAATCCAATATAAAAACAGATTACAGCAAACATTTTGAAACCCTGATTTTACAAAATGTCTAATGACATCAAGCCTTGGTGACTTGCTATACATCTACTGTTTCTTGCTTCCTTAGAAAAGAAGGAATAAATGAAGTGAGAAGAACACTGGAA-AAATCTAATAGACAAACTGACTAATCTCAGACCCC-AAGGTCATAGCAAAGCAATTCATTTCTTGGCTTTTCAACAGCACAAGACATGATTTATCAATCTGAGACCAGGCTTATAAACACTATACATCTCAATAATATGTTCTTTGCACTGTGTAACTTTTTAAACAATGATAGATTGCTTGGGCTGGACCAAAGTTATTTTACAAACAGAAAT ..::..x.x.:.:.x.:......---....x.:-.x.:........:...-...::...x..xxx:x........:...:.......xx..........:.:xx...x...::x.....:xxx:.:.:.x....x.x....x....xx......x..:....:......x:..:x......x..x..x:......:....:x...-.:.:.:..x..................................-..:x............x..:...............-.......x..x.......................-..x..:.......:...............:...x....x...:.....:.............:............................:........:.......x.:.x.xxx..x.....:..x.:.:..:xx:.... 23M3D7M1D16M1D154M1I43M1D35M1D34M1I143M 359/455 78.9% 457/94230402 0.0% 9/455 2.0% 108143893 82070662 +5315 chr4 + 190214555 138214574 138214573 138214671 98 TGGCTACTTACTTTTCAGGGTTTTCTACTTCTTCAGTAACAAAGTTGAGGTAAAACCTAAAAATAG---ATAAATAAATTATAAACTATTAATATATTTTA chr4 + 94230402 30069478 30069477 30069578 30069478 30069477 30069578 101 TAGGTACATACTTTTCAGGGTTTTCCACTTCTTCGGTAACAAAATTGAGGTAAAACCTAGGAAAGAATCATAAATACATAATGAGGCCTTGGTAGATTTTA .:.x...x.................:........:........:...............::..x::---.......x..x..:.:x:x..::..x...... 66M3I32M 77/98 78.6% 101/94230402 0.0% 3/98 3.1% 108145096 82069459 +6642 chr4 + 190214555 138219258 138219257 138219371 114 CAACTTACCAGCCAGCATATGCATACATTCCATAATAAAAAGCCAGTGGCAACCGCGTAATACTTGAATCTCTTCCTGAAAAGGCGTCTTTAAAGTTCTGCGTTTGACCTGTAA chr4 + 94230402 30071965 30071964 30072078 30071965 30071964 30072078 114 CAACTTACCAGCCCGAATAGGCGTACATTCCTGAATAGAAAGCAAGTGGTAATCCCATAATACTGGCATCATTCCCTGAAAAGGCATTTTTAAAGTGCTGTGTTTCTCCTGCAA .............x.x...x..:........xx....:.....x.....:..:.x.:.......x.x...x:.:...........:.:........x...:....xx....:.. 114M 90/114 78.9% 114/94230402 0.0% 0/114 0.0% 108147293 82067262 +16843 chr4 + 190214555 138222994 138222993 138223361 368 TCTTAATCCTCTTTCTGCCATTCAACTGTAAAAACCAACTCACTCACAATGTAGCAGCCTTTCAAATCAATTAGATGACAATATAGAGTTTAAGTTCCACAGGCAGAGACTAATTAAG-GATTCTGTTAGTACAAGCAAAAGTTAGTGT-------TAAAAAAGACCAA-------AAGCAGATACGTATTTTAAAAAGCATTTGCTTTTCAGTCCATACCTTTAATTAGCTGCATAACTCCAGGGACTATAATTATCAGAATTGCTGTGAGCTTGCAAAAGGTTAAGAAAATCTGGATCCGGGCGCTCCAGCTGACACTCATGCTATTTAGGACCATCACTACAGCTGCAAACAAATAGAGGAAGTTACAAAAGGTGAATTC chr4 + 94230402 30074616 30074615 30074996 30074616 30074615 30074996 381 TCTGAATAGTCTCATTGGCATGCAGAAGGAAATACCAGTTCA-TCCCAGTGTAGTTCCACCTCTAATCAATTACATGACAGTACAGAGCTCCAGTTGAACAAGCAGAGACTAATTAAGAGATTCTGCTGCTATAAGCATTATTTGGTGGAGGCAGGTGGGGGAGACTGGGGAGGGTAAAGATAAAAGCACTTTAAAA-GCATTTACTTTTCATTTCATACCTTTAATTAGCTGGATAACTCCGGGGACTATAATTATCAGAATTGCTACAAGCTTGCAAAAGGTAAGGAAAATCTGAATGCGGGCACTCCAGCTGACACTTGTGCTATTCAGGACCATCACTAGCGCTGCAAGAGGAAACAGAAAAGTCAGAAAGAAATATTC ...x...xx...:x:..x...x..:xx.x...x....::...-..x..:.....:xx.x::..x.........x......:..:....:.:x....xx...:................-.......:.:x..:.....xx.x..:...x-------.:::::....:::-------..:x.x.x.x.:.:.......-......:.......x.:..................x........:........................:::..............x.:.........:..x.....:..............::.......:.............xx.......:x::.x.x..:..:x.xx:....:x:x.... 42M1D75M1I30M7I13M7I21M1D185M 275/366 75.1% 381/94230402 0.0% 17/366 4.6% 108148378 82066177 +9287 chr4 + 190214555 138232259 138232258 138232397 139 ATACTCACTTATGCCCACAGCTGTAATGAGCTTGATCGCAAGTTCAGGGATTTCACATTGAATAAAAAATGGTTCCAGAATGTAGCGTCCAAATGCCAGGGATATCACAGCAGTAGCTGCAGGGCTAAAAAAAAATGTA chr4 + 94230402 30082397 30082396 30082535 30082397 30082396 30082535 139 ATACTTACTGATGCCAACAGCTGTAATAAGTTTAATCGCAAGTTCTGGGATTTCACACTGCATAAAGAAGGGTTCCAAAATGTAGCGTCCAAATGCCAAAGATATCACTGCTGTGGCAGCAGGGCTGGAGCAAAGAGTA .....:...x.....x...........:..:..:...........x...........:..x.....:..x.......:....................::........x..x..:..x........::.:x...:x... 139M 115/139 82.7% 139/94230402 0.0% 0/139 0.0% 108149862 82064693 +8217 chr4 + 190214555 138236315 138236314 138236459 145 ATGCTCTTACCGTATTATGAGGAGTTCCACCCAGACTCGTACAAAAGCTGGTAATGGACCAAAGACTTCCAAAATATATGTGTAATGACCTCCAGATTTCTTTATAGTTGTTCCCAATTCAGCATAAGACAAAGCTCCTGTGAAA chr4 + 94230402 30086233 30086232 30086377 30086233 30086232 30086377 145 ACACACTTACCGAATAACCAGCAGTTCCACCCAGACTCTCACAAAAGCAGGCAGTGGGCCAAAGGCCTCCAGGATATATGTGTAGTGACCGCCAGATTTCTTAATGCACGTTCCCAGCTCAGCATAGCAGAGGGCACCTGTGAGA .::.x.......x..x.:x..x................x:........x..:.:...:......:.:....::...........:.....x...........x..:xx:.......::........:x.x.::..x.......:. 145M 111/145 76.6% 145/94230402 0.0% 0/145 0.0% 108150082 82064473 +3150 chr4 + 190214555 138237697 138237696 138237755 59 CAGAATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792608 24792607 24792664 24792608 24792607 24792664 57 CAGAAT-TACTTATGTA-AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ......-..:x...:..-.x...................x:........x......... 6M1D10M1D41M 50/57 87.7% 57/94230402 0.0% 2/57 3.5% 113445089 76769466 +3140 chr4 + 190214555 138237701 138237700 138237766 66 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823269 7823268 7823334 7823269 7823268 7823334 66 ACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT .:.........:.:......x.:.:x.x..x.xx.x...:...x..:..............x:... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 130414432 59800123 +3542 chr4 + 190214555 138237702 138237701 138237774 73 TATATATATATATATATATATATATATATATATATATT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 + 94230402 7823264 7823263 7823340 7823264 7823263 7823340 77 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ..:...:.........:.:......x.:.:x.x..x..----..:...x..:..............x:.....::.. 38M4I35M 56/73 76.7% 77/94230402 0.0% 4/73 5.5% 130414438 59800117 +3186 chr4 + 190214555 138237704 138237703 138237765 62 TATATATATATATATATATATATATATATATATATTTT----TTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.x..:..----..:...x..:.............. 38M4I24M 49/62 79.0% 66/94230402 0.0% 4/62 6.5% 130414440 59800115 +3145 chr4 + 190214555 138237706 138237705 138237764 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 104986703 85227852 +3028 chr4 + 190214555 138237708 138237707 138237772 65 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 33251003 33251002 33251067 33251003 33251002 33251067 65 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGA .:.:.:.:.:.:.......:.:........xxx.....x...x.....x..x.......x::... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 104986705 85227850 +3064 chr4 + 190214555 138237710 138237709 138237789 80 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTC chr4 + 94230402 34623076 34623075 34623155 34623076 34623075 34623155 80 TATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGATTTTTCCTTTTAATATTAGGCATTGTTTTTTC .........xx......:......:.:....:.......:.x.:xxxx.....::....:.x..x::.:x.:::.:.x.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 103614634 86599921 +23323 chr4 + 190214555 138241787 138241786 138242657 871 ACTCACCAAATAGTGACAGGACCCCACACACCGTCCAGATGGTCAGAGACATGCCCACGCTGCCCGTGTTCTGGAGCACGCCCTTAGGAGAGATGAAGATTCCTGCTCCAATGATGGTGCCAATGATAATGGAGACTCCCCTCAGTAAAGTGACTTTCCTCTTCAGCTGCACTTTCTCCTGCCCAGGTGGCTCCTTGTTGCCCAGGGAAGGCAGCCTCCCGTTAACATTTCCCTGCAGGTAACCTCCTTTGGAGATGGTGGACACAACAGGCTTTCTGACCATAGTAGGGACACACGGGGGAAAAATAAAACAGAGGGAAAG----AAAACAAAACTTTCAACTTTGGTGTCTCTTGGTGTTACTGATCGATGTCTTCCTCTGCTTTCAGACTGTCTCTCTCAGCGCTATAGTGTTCACAGGTGAAAACTCAAAGGTGTGCTTTTTCCTTCACAGCGATCTAATTACTACTCAGAAACACCTGTGTATGCATCGTGCTCTCAATTCTCCACCTCCTCGTTCCACCACTGCTGCTGCTGCTGCTGCTGCCGCCCTATCATTACAAACCAGCTCAGCTTCCTCATGGGCTTGTATTTAAGCGCCTGCCTGTCACACCAACTTACTACAGCTAAATGATGATGCAAATTCTCCAGGTTTGCATCAGCCACATGAGAAGCCTCCAGCATTACTCAGCTCTTTTTTTT-----------AAAAAAAGAAAAAAACAGGAGGAGCTTGTTGCTCAACTGACCTAAGCTTTTTAG--AGAACAAAGCACACACTTTAAAGAGATTTTAGCCAATCCAGAAGTAGTAAATTCGGAACAGACCTTCCCAGAGA--------------TTTAAAGCAACTCGTAGTGAGCAACAAAAG-CTGTTCAAACAAAA chr4 + 94230402 30088998 30088997 30089804 30088998 30088997 30089804 807 ACTTACCGAAGAGTGAGAGGATGCCGCATGCTGTCCAGACTATCAAGGACATGCCCACACTGCCCGTGTTCTTCAGGATCCCCTTGGGTGAGATGAAGATGCCAGCCCCAATGATAGTGCCAATGATGATGGAGATCCCCCTCAGCAGCGTGACTTTCTTCTTCAGCACCACCTTCTCTT------GTGGCTGCCTGCTGTCCATGGAGGGCAACCTGCCGTTCGGCTGCCCCTGCAAGTAGCTCCCATTAGGCACCGTCACGACAGCAGCTTTCCTCACCATGCTACCGTGCCACCAGCG--------CACCGATGGCGAGCGCAGCCAAAAAGTTCCCAGC-------------------AGCAACTCAAGGCTTTTTCCTCTCTCAGTCTCTTCCTC-CGCCGCC-------------------TCTTATCGGCGGGGTTGCTCCTACGTGCAGGTAGAACT-CTGCTCTG---CCCCGCTGCCTGC-CAGCGCTCGCAGCAC-CTGCACCCTCACCCTGC--------------CCACGGGCACTGCCCTATCGTTGGGAACCAGCTCAGCTTCCGCGTGGACCTGTATTTAAGC----TCTTGTCGTACCAAGTTAGTCCAGCTGAATGATGATGCAAATTCTCCAGGTTTGCATCAGCCATTTGAGAAACCTCTGGCATTACTCAGCACTTTTTTTTTTTTTCTTCTCAAAG------------CGTAGGGGCATGTTGCACAACCGACCTGAGCGTGGTAGGAGGAACAAAGC-----CTTCGCAGGAAACCCAGCCCATCGAG-CTCAGCACA-TCGCCGCCGGCACCCCCAGACACGCTCCCCAGTTTTTTTACAGCAACTTGTATGCAGAAACAAAAGCCTGCTGAAACACAA ...:...:..x.....x....:x..:..::.:.......:x:...::...........:.............xx..x.:x.....:..x...........x..x..:........:...........:.......::........:.:x.........:........xx...:.....:.------......x.:..:..:...x...:....:...x.....x:xx.x:.......:...:.::..x..:.:x.:x..x:xx...:...x:..:..x.....:x..xx.xxx...x:.x.--------x..x..x..x:..----:xx.x...::.::..:.-------------------.x::.::x.x.x...::..:x..:....x..x.::...-.:x...:-------------------x..:.xx..:.x.x..x:....x.:::xx.:.xx..:.-..:...x.---.x..xx..:x...-:x.:....x..::x.-.::.x:....:::.::.--------------.::.x.x::.:........:..:x:................x.:...:.:...........----x.:....::.....x...x.x.....:....................................:x......:....::............x.........-----------...:------------x.x...:..x......x....:.....:...x.xx...--:.........-----...::x..::.x:::....x...x..-xx:..:.x.-...xx:.x.:.x::......x.--------------....x.......:...xxx..x........-...:.x.....x.. 180M6D115M8D13M4I17M19D38M1D7M19D38M1D8M3D13M1D15M1D17M14D61M4D100M11I4M12D38M2I10M5D26M1D9M1D22M14I30M1I14M 543/775 70.1% 807/94230402 0.0% 128/775 16.5% 108152789 82061766 +3121 chr4 + 190214555 138254410 138254409 138254453 44 CTCAAAAGAAAACAAAAAACAAAACAAAACAAAAAGGAATTTTA chr4 + 94230402 93850969 93850968 93851012 93850969 93850968 93851012 44 CTCAGAAGAAAAAGAAAAACAAAACAAAACAAAAAAAGGTTTTA ....:.......x:.....................::::..... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 44403441 NA +3160 chr4 + 190214555 138255814 138255813 138255860 47 AATATGTGTGTGTGTGTGTGTGTGTATGGAAATGTATAAGAAAAGCA chr4 + 94230402 27325520 27325519 27325566 27325520 27325519 27325566 47 AATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCA ...............:..........:.x.x..:...:.:..x.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 110930294 79284261 +3774 chr4 + 190214555 138295527 138295526 138295650 124 AGGAGTAGACAGGAACTCTCTGTAATATCTAGCA--ACTTTTCTGT------GAGTCTAAAACTATTTAAATGCTTTTTAAAAATATATACTTACACACACACATACACACACACACACACACATTCAGCCT chr4 + 94230402 66743559 66743558 66743686 66743559 66743558 66743686 128 AGCAGCAGCCAAG---TTTCTAAGCCATCTAGCAGCACTGTTAAGTAACATCGAAGGTAAAAC-AGATAGGTGCTTTATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCAGTCT ..x..:..x..:.---.:...:x:x:........--...x..xx..------..:xx......-.xx..::......x....x.x...:.::.....x...x..x:..................x....:.. 13M3D18M2I10M6I11M1D68M 88/120 73.3% 128/94230402 0.0% 12/120 10.0% 71551968 NA +3522 chr4 + 190214555 138303149 138303148 138303222 74 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAAGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........::........x.xx.x...x::..........::..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 62269945 NA +4197 chr4 + 190214555 138317907 138317906 138318107 201 ACATGGAAAGGAATTTCCAGAAGCTACCTTTCTTTGGCTCCCAGTCAT---CTAAATTAATAAAAACATTCTGCA--ATTAA------AAAAAATCTAAAAGATACTG---GAAGCAAGTTTAATATGCT-----GAAAATATACATGCAAGTCTACTCTATACATGAGTGACAAGTAAGTCACATAGAATTATATTAAAGCAATTATTACATGTCATTT chr4 + 94230402 30106062 30106061 30106281 30106062 30106061 30106281 220 ACATGCAGAGCATGCTGCAAGAACTGTCTCATATTCACCCCTTGCCCTATTCTAAGTTAATATGAAAACTATGCATGATTAATCTTTTAAAAATTGGAAAAGATGATGCCTAAGGCATCTCTAATCAACTTGCTTGGCGAAGTACATACAGTTCTGCTGTAGTTCTGCACAGCAAATAAGCTACATAGAATTTTAATACAGCAATTACCGCCTGCCACTT .....x.:..x.xx:.x..::.:..::..:x:x..x:.:..:x.:.x.---....:......x:..x.:.x....--.....------.....x.xx.......:x..---:.:...xx.:....xx:..-----.:x:.x:.....:..:x...:..x..xx:x..x::::...:....::..........x..x..x........:::.x..:..:.. 48M3I24M2I5M6I20M3I19M5I85M 128/201 63.7% 220/94230402 0.0% 19/201 9.5% 108211845 82002710 +3579 chr4 + 190214555 138329133 138329132 138329319 187 GAAGGAAGGGGAAAGAAAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAAAAGGGA--------AAGGGAAAGGAAAG---GAATGAAGGGAGGGAGGGAGGAAAGAAAG chr4 + 94230402 17246051 17246050 17246248 17246051 17246050 17246248 198 GAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAG ...xx:..::x:...x..x..x::..........:..x......x:xx::..:.x.:.:x.x...xx..::x.:...xx:..::...:...:.:..:.:xx.xx.:::.:.......:x....x::x..:..:....:x.:xx.--------x..x..:.:.....---:.....:::..x.xx..x:..::...x.. 144M8I14M3I29M 108/187 57.8% 198/94230402 0.0% 11/187 5.9% 121083082 69131473 +3292 chr4 + 190214555 138329135 138329134 138329311 177 AGGAAGGGGAAAGAAAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAA----GAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAA------------AGAAAAAGGGAAAGGGAAAGGAAAGGAATGAAGGGAGGGAGGGAGG chr4 + 94230402 17246057 17246056 17246249 17246057 17246056 17246249 193 AGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGG ..:.x.::.x..x.:x:::...:.:......x......x:xx.:....x...----...xx.::.x.:...xx:..::...:...:.:..:.:xx.xx.:::.:.......:x....x.:x..:..:...::x..------------..x:.:.:.:..::x:...x..:.:..xxxx:.x.:.....:x... 52M4I79M12I46M 102/177 57.6% 193/94230402 0.0% 16/177 9.0% 121083078 69131477 +3233 chr4 + 190214555 138329150 138329149 138329249 100 AGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ...:....::..xx.x...........:...:.....x...::xxx....xx:..:x:::.x.x::..::x..:.....:...:::.:..:..::..x.. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 87180771 NA +3106 chr4 + 190214555 138329188 138329187 138329269 82 AGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..::..:.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x..::..::.x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 97217010 92997545 +3293 chr4 + 190214555 138329190 138329189 138329293 104 AGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAG----AAAG---AAAAA-------------GAGAAAAAGAAAAAGGGAAAGGGAAAGGAAAGGAA chr4 + 94230402 54011593 54011592 54011723 54011593 54011592 54011723 131 AGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .....:.:...x........x......:..:....-------....x.x.:x..::...::x....:----....---.....-------------.........x..:..:x:....:...::...::.. 35M7I25M4I4M3I5M13I35M 78/104 75.0% 131/94230402 0.0% 27/104 26.0% 84317597 NA +3200 chr4 + 190214555 138329264 138329263 138329339 76 AAAGAAAAAGGGAAAGGGAAAGGAAAGGAATGAAGGGAGGGAGGGAGGAAAGAAAGAAGGGAGGGAGGGAGGAAGG chr4 + 94230402 17021717 17021716 17021792 17021717 17021716 17021792 76 AAATGCAAAGGGGAAGGGGAAGGAAGTTTATATGAGGAGGGGGAGGGGGGGGAAGCAGAAGAGGCAGTGAGGAAGG ...x:x......:.....:......:xxx..:x::......:.:.:..:::...:x.:::....x..x........ 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 121307547 68907008 +4009 chr4 + 190214555 138329267 138329266 138329385 119 GAAAAAGGGAAAGGGAAAGGAAAGGAATGAAGGGAGGGAGGGAGGAAAGAAAGAAGGGAGGGA-------------GGGAGGAAGGAAGGAAGGGA---GGGAAAGAGAGATAAAGAATAAGCAAGCAAGCAAGG chr4 + 94230402 1500703 1500702 1500837 1500703 1500702 1500837 135 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagagg ...:.:::......x:::..:...:.:...:....:.....:.::...x.:::..:....::.-------------.:.:....x:........:.---..:...:.:.:.x......x.x.x..::.::x:... 63M13I20M3I36M 77/119 64.7% 135/94230402 0.0% 16/119 13.4% 136828564 53385991 +3141 chr4 + 190214555 138329980 138329979 138330091 112 GTGCGATTTAAATCTAGATAATAGTAAGGACATGCATTTGCCTACAGCTGGAGCAAGTGCAGCTCGTTCTATAGCTCACTCTCAAAGTCATTTTTCTTCCTTTTGACACCAG chr4 + 94230402 26471202 26471201 26471312 26471202 26471201 26471312 111 GCACGATCTAGAT-TGGTAAAGAGAAATAGCACAGAAACAGCTACATCTGTAGCAGTCAGAGCTTTCTGTACAGCTCAGTGCCTCAGGCATTTTCCTTCCCTCTGACACCAG .::....:..:..-.:.xx..x..x..x::..::x.xx::x.....x...x....:x::x....:x:.x..:......x.x:.xx..x......:.....:.:......... 13M1D98M 70/111 63.1% 111/94230402 0.0% 1/111 0.9% 111858778 78355777 +6651 chr4 + 190214555 138335188 138335187 138335511 324 TGCAAAATAAACACACAAAAGCACATGACATGAACCTTCGTCAACATTCCTTAAATACTGCCTTTACTAAGGAAAGCAC---AGGTCCTCATGTGGTTAAGAGACCATAATTTTGGCCTAGGAAG-CTAGTCTTTACGTTGAGAAAATGAAAGCCCTTCGAAAATTAATAGTTCTGCATGTCTTCATTCACTTTACAAGGGCACAACCATGCTGATTCCTGCACTGTAGCAATTTAAGGAGAGTAAGCATCAGCCTCACCTGAGAGAT---ATGAATCATGATGTAATCTTCCCCAGATTGCCCCCATTCATCCAGCCTCC-CACAACTTCC chr4 + 94230402 30110812 30110811 30111121 30110812 30110811 30111121 310 TGCAAAA-AAAAAAAAAAAAGCA----------ACTTCTATGTATATTCATTGAAGGGTTGACTTAACAAGTGAATCCCCTAGAGTTTTCACAATGCCCTGAGATGGTAATTTGGGCTCAGCAAGACTCCTCTTCTTGCAGCAAAAATGAAAACCTATTGAAGATGAACAAGTAGGTAGGCCTTCTTTCATTTTGCAAGGTCACAAGCATGCTGATTACAGCACGGGAGCAATTTTTGAAGAAATATTGCCTGCA-CACCTGAGGGATGTGGTGAGTCGTGAGCTGACCTT--CCAG--------CATTTCCCCAACCTCTGCAGAGCTTCC .......-...x.x.x.......----------..:.:::.xx.:....x..:..x:x.xxx:...x:...x:..x.x.---::..::...::xx.::xx....:x:......x...::..x...-..xx....:x:.:x.x:.........:..:x.:...:..x..:.:x.xx.:.x.:....x....:...:.....x.....x..........x.x....x.x........xx.:...:xx.x:::.x..x-........:...---:...:..:...xx.:.:...--....--------....:x:...:....:-..x.:..... 7M1D15M10D46M3I43M1I129M1D12M3I20M2D4M8D16M1I10M 199/302 65.9% 310/94230402 0.0% 30/302 9.9% 108224376 81990179 +3026 chr4 + 190214555 138442970 138442969 138443018 49 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGGAACAC chr4 + 94230402 84199595 84199594 84199643 84199595 84199594 84199643 49 TCAAGACAAAGTAAAAAGAAAAAAGAAAAAAAAGAAAAGTGGGGAATAC ....:.x...:x.....:......:........:.....x:.....:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 54243375 NA +3036 chr4 + 190214555 138445556 138445555 138445595 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 134036474 56178081 +3256 chr4 + 190214555 138467904 138467903 138467996 93 AATACACAAACACACACACATACACATATATATATGCATATACACACATACACATATATAGACAGACACATATATATGTGTGTGTATATATAT chr4 + 94230402 22600179 22600178 22600261 22600179 22600178 22600261 83 AGCACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATG----------TATATTTGTGTGTGTATATGCAT .::...x...:x..x:x.x.:........x:.:.....x.:...::......x.x....:----------.....x.............::.. 60M10D23M 60/83 72.3% 83/94230402 0.0% 10/83 12.0% 115867725 74346830 +3060 chr4 + 190214555 138496448 138496447 138496519 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx::x.........:..x.xx:.x:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 62463242 NA +7643 chr4 + 190214555 138559098 138559097 138559387 290 CATCTCTTCTCAAGAGAAACAGGAAAAGGATAAATTATATCAGTTTATTCTTCTGATTCCCTCTGCTGAGCCAGTTCCTGCTTCAGTGAGAGAAACCTTATAATCAGATTTGTGCAAGTATTTCTGTCCAGGCTTGCTGAGCTTTGTCAGCACAAAATGTTCACAAACTGCTAACATACAGTAGTATTTTTTTTCAGTCGATTTGTACAGTATCATTT-AATTTCACTTTTTTCCACCTATAGACCACATATTATATTCCCAGACAG-AGAAAAGAAAAAGCTACTCACCTA chr4 + 94230402 30188346 30188345 30188606 30188346 30188345 30188606 261 CAGCACCTCTGAAGCAAACTAGCAGATGGA--AAGTGTAGCAGTCTCT-----------CCTTTGCTGAGGCAGTCACTGCTGCGCTATTGGAAGTCCTCTAATCAGATTTGTTCATAT---TCTTTCCAGGACTGCTGAGTCTTGTCAGCAAAAAATTTTCACAAAATGCTAACATTCAGCA------CTTTGCAGTCACTCTG-GCATTTTCATTTGAACTACACCTTTTGCAACCTGCGTGCC--------TTCCTCCAGAAAGTAGGAGAATAAAAAGTACTCGCTTA ..x.x.:...x...x:..x:..x.:.x...--..x.:..x....:.x.-----------...:.......x....:x.....x.:x.:xx:...::.:.x.............x..x:.---...x......x:.......::.........x.....x........x.........x...:.------:...x.....:x.:..-:..x.x......-..:.x...:....x.x....:::x:..--------.x:::.....x..-..:.:.:x....:x.....:.:.. 30M2D16M11D60M3D61M6D16M1D12M1I27M8D13M1I24M 184/259 71.0% 261/94230402 0.0% 33/259 12.7% 108370752 81843803 +3193 chr4 + 190214555 138612241 138612240 138612304 64 TATATATATGTATATATATGTATATATACACACACACACATATATATATGTATCATGGATGTCA chr4 + 94230402 12852055 12852054 12852118 12852055 12852054 12852118 64 TACAAATCTGTAAACGCATATATGTATGCACACTCACACACATATATATTTATTGGGGATACCA ..:.x..x....x.:::..:...:...:.....x......:........x...::x....::.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 125760186 64454369 +24263 chr4 + 190214555 138614421 138614420 138615083 663 CTTTTCTTCCTCTTAGACTGCCTAAGTGGCAGACCCCTGTCACATCAATTGTGGGTGTTAATATATCAGTTCCAATGATTTTGTC---TTAAAAATAACTTTGCTGCAGAGGCTGCCTTAGGGAGCTCAGT-CTCCAAGGAGGAAG--CTACGTAACAGCCAGTCCATTCTGATCTCCCAGTTATTGACATGCAGAAAAAGAAACATTCACTTTTAATAATAGGGCTCTCTTTCATGCAAAGATAGTACAGGATTTCTAAGAATAAATAATTCATGGTCCTCCAAGCTCTCTGAGAATAAATTTGTTCCTTTTCTGTTTTGTTTTTCTTCAGGATATGACATCTTAGGAAGAAGGGACTGGGGGAAAGAAAGCACTTTCTGCTTCTGTGGATATAAACA--CACAGTGTTTTATTCCCTAGTGCAACAAAACCTCAAGATCAACAGACAAGAGCTGAAAACCCTTTCCCACCAGAC----ACAGTGCCATCTAAATGTTCTCTCAAAAGATAGCATCTCATAAACAATTTCAACAAAAGGATGT-CAGCTTTTACTTTATGTGCATGCACAAAATCACTTTTCAGGAAAAAAAATGACCATTACCGAATCCATCATAAAATTAATTACATTTAGTTG-ATCACGTTGGCTGACTGGT----TATAACTCTTGCTGTATTTT chr4 + 94230402 30199788 30199787 30200431 30199788 30199787 30200431 644 CTTTTGATCCTCGTAGGCCTTTTAGCAGG--GCTCCATCTCACATGAAT---------------ATCAAATCTAACAACTTTGTTGTTTTAAGAAGAGCTTCTTGGTGCCAACTAGCTAGAGATGCCCAGTTCTCTAAGGAAAAAAGACATCTTAATCATCAGTCAACTCTGATCTCCATCTTATTGACGTGCAGAAAAAGAAACCCTTGCTTTTAATAATAGGGCTTCCTTTCATGCAAAGATAGAGGAGGCTTTCAAAGGATAAATAATTCATGGTCTTCCAAG--CTCTGAGAATAAATTTGCTCCTTTTCTGCTTTGCTTTCCTTCAAGATATGACATCTTAGGCA-----AGCAGGGGGAAGGAGACTGCTCTTTGCTTCTAAGGCTATAAACATGCTCACTGTTTCATTCCCCACTGCAACAAAACTATAAGATCAATAGACAAGCGCTGAAAAGCTTTTCCCACCAGGCAGAGACTGTGCCATCTAAATAGTCTCTCAAAAGATATAATCTCACAAGCAGCAGCAAGAAAAGAGCATCCAGCGCATGGCTAGGGAGCATGCTCGGAATAATCTCACATGGG-------GACAGCTCCACAATAAGACATCAAGTTAATTAAGCTTGATAGTATCA------CTGACTGGTGACCTATAGTTCTGTCTCCATTCT .....xx.....x...:.:x::..:xx..--.x:..x.x......x...---------------....:x..:..::.:.....:---....:..x.:...:x:x.::xx::..:x..x::.:x..:....-...:.....::..:--.xx.x...:x::.....x.:..........xxx........:...............x:.::.................::.................x:x...x....x...:.................:......--.................:..........:....:...:.....:................x.-----::.x.......:..:.x::..:.:.......:x..x........--.x..x.....:......:.x...........:x:........:.......x........x.:...........:.----..x.............:x..............xx......:..:..::xx...x.....::::.-....x:x.:x:.x:x.x......x.::...x.::.:x..x.::-------...x::.x.xx...xx:x...x..:.......x::..::.x.-....------.........----....::...xx..x:...:. 29M2D18M15D21M3I43M1I14M2I138M2D62M5D44M2I75M4I64M1I43M7D42M1I4M6D9M4I20M 458/626 73.2% 644/94230402 0.0% 55/626 8.8% 108414633 81799922 +3339 chr4 + 190214555 138621391 138621390 138621476 86 CACACAATCCAAAAGAAGGCAAAAAGAACAAAGAGCAAATGGAACAAAGAGAAAATAAATAGCAAGATAGATTTTGAAACCACCTT chr4 + 94230402 48895151 48895150 48895236 48895151 48895150 48895236 86 CACGCAAGCAAAACCAAGACAGAAAGGTCAAACAGCAGAAAGAAGAAAAAGAAGAAAGAGAGCAGCCTAGAGTTGAAAGCTACCCT ...:...x.x...xx...:..:....:x....x....:.x:...x...:....:.x.:.x....:xx....x..x:..:.:...:. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 89726240 NA +3088 chr4 + 190214555 138640561 138640560 138640691 131 TGTTTTTCTATCTTTCAAAATG---AGTTTTCCAAGTATTCCCCACCCCCCCAACCTTTTTTTTTTTTTTTTCACATTTCTAACCCTCCTGATTTTTCTTTTTTTTT--TTTTTTTTTTTTTTTTTTGGAGACAAT chr4 + 94230402 76219498 76219497 76219633 76219498 76219497 76219633 136 TGCTTTTACATTCTTCCAATTTTCCCACTTTCCAGGGAGATCCAGCCCCCCTATTTTTTTTTTTTTCTGGTTCCCATCTCTAATAAGCTCAATGTCTCCTCTATTTCCACTATTATTTGCTTTTGCTTAAGACAGT ..:....x:..::...x..x.x---x::......:.x.xx:..x:......:.x::..........:.xx...x...:.....:xxx.:::..x.:..:.:.x...:--:.x..x...x:....x:.x:.....:. 22M3I82M2I27M 81/131 61.8% 136/94230402 0.0% 5/131 3.8% 62421063 NA +3145 chr4 + 190214555 138659551 138659550 138659594 44 GAAGTGGGTGGGGTGGCACTGGAGGTGAGCAGGCTGTAGCAGTG chr4 + 94230402 51237059 51237058 51237102 51237059 51237058 51237102 44 GAAGAGGATGGGGTGGCAGTGGGGGTGAGAAGGCTGGAGCAGTG ....x..:..........x...:......x......x....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 87422492 NA +19756 chr4 + 190214555 138659680 138659679 138660084 405 AAGTATCCACTCCAGTCAGCTCA-GCTATTTCAACTAAATCCATTTCCATCAAATTATCACTTCTAAGAGTGATAGAAAAATTAATGATTTCTTGAAGGG-ACTATTGTATTTAAATATTTCAAGCCTGTTGGTGTGATGTGTGTCAGCAAGAGAGAAACATATTGACTTGGAGCTGCAGCTAATGACGGCTTTTATAAATATCCTGTCAGATACATAATGGCTCTCAATGGA-TCCAATATGATGTACAGTTCTAAAGCAAGCAGGGTT-TTGCCAAGAGGCTCAAAGGAAACTGCCATCACAATAGCATGGGCTGAATAATGGGATTTTCATTTACCTTTCCGACCACAGAAAG------GAGCAGCGGAGAGGGTGACTCAGCAGGCATCAAGGAGAAGGTGGATTGATTCA chr4 + 94230402 30213559 30213558 30213972 30213559 30213558 30213972 414 AAGCAGTAATTTCAGCCAGGTCCCGCTGTCCTATTCAAATCCATTTTCATCAGATTATCACTTTCAGCAGTGATAGAAATACTAACGATTTTTTTAAAGGCAATGTTGCACTTAAATATTTCAAAACTACTGTTTTG-TTTGTGTCAATGAGAAGGAAACATATTGACTGGAAGCTGCAGCTAATGCTGCCTTTTATAAATCTCCTGTCAGGCACAAAATGGCTCTCCATAGATTCTAATATGATGTAGAGCTCTAAAGCAAATACTCCTATTGCCAAAAGGCTCAAAGGGAACTGCCACTGCAATATCATGGCCTGAATAGTGGGATTTGACTTTATCTGTCCTACCACAGAAGGAGAGAAAAAAAAAAGAGGAGATGGATCAGAATACTTCAAGTAGAAAGTTGATTGATTTA ...:.x:x.:.:...:...x..x-...:.:::.x::..........:.....:..........::.:x...........x.:...:.....:..x..:..-.x.:...:.:.............:x..::..x.x..-.x.......:::...::..............x.:..............x:.x...........x.........::...x..........x..:..-..:...........x..:..........::.xxx:.-.......:...........:........:::.....x.....x.......:........xxx....:..x...x.........:.------:.:x.:x:...::.:..:x....x.x:.x.....x....:..x........:. 23M1I76M1I36M1D95M1I36M1I85M6I53M 306/404 75.7% 414/94230402 0.0% 11/404 2.7% 108446121 81768434 +8847 chr4 + 190214555 138679430 138679429 138679690 261 AGCTGAGAGCAGCGAGTTGAGGAGCAATTCCTCATGTAAATTAAATG-----------GAAAGGAAGGGCTATCCTGGCACTCAAGGATTTGGAAGCCAATAGCACCAACATGATTAAATAATTGAACTGTCTCACCTTGCCCAGTCAAGCTGGATTCCAACGAGGGTAATTAATCTTCATGT-GCCTGTTATTCCCTGCCC------TGCTCCTGTTCAAAGTCAAG---TTTCTCAACCTGACTGTTTCTTG-CAAGAGAAGAAAAGGGAGGAGGAAGCAA chr4 + 94230402 30220582 30220581 30220864 30220582 30220581 30220864 283 AACAGGGAGCAGGAAGGTTAGGTACATGAAGTCACATAAATTAAATGCAGGAAGGTGGGGAAGGGAACAAAATCACTACATTCCTGGCCTTGAAAGCCAAAGGCAGCACTATGATTAAATAATTAAACCATCTCACCTTGTGCAGTCAAGCTAAATTTCAACAGGAGTAATTAATCTTCATGTGGTCTTTTATACCCTGCCCTATCTGTACTTTCGGCCAAAGTAAAACATTTCCTCATATGGCCTGTTTCTTTCCGAAAGGTATAAATATATGAGGAAAGAA .:.x.:......x:..x.x...x:..xxxxx...::...........-----------.:....:.:x:xx...x:x:..:..xx..x:...:.......x:...x..x:..............:...::..........:x..........::...:....::.:.................-.:..x....x........------.:..:::.x:......x..:---..:....xx:x.x.........x-.:.:..:x:x...x:x.x......:x.. 47M11I125M1I18M6I20M3I23M1I28M 182/261 69.7% 283/94230402 0.0% 22/261 8.4% 108458848 81755707 +8826 chr4 + 190214555 138681095 138681094 138681679 585 AATGTTCTGGTTTTTAGCTTTGCTCACTTAGATGTTATTTTCCTTTAAAGGGCTGCTAGCCACAGAGACCGTTTTCCAAA-CAAAGTGCAATGCTGCCCCCTGGTGGTCGAATAGTGTGAGAGCACCTGTAGAAATCGGG---CATCTC--------TCCTAGTTCTGC-----------CTAGATTTCGTTTTGCTATCTTTTCATCCTCTGGAGTGCAAATATTTCTCCCTTAAAGATTCTCAGCACAGAGATATTTTCTGGATCA-CCTGTTTCACACACTAATCAACAGAGCATTTTATCCTAAAATATGAACTGTGTGCTGATTACAAAACAAGCCGTGG-------------------TGGTGAGTTAATTTTGCTTATAAAAATTAAGCAATC--TCCCTGGAGG-----AAGCCCAGAAATCAATCCTATTTCATATAACCTTTAGAATTCTGATTGGAATTCTCACTGGAAAGACATTTACTGAGAACT-CAAGCTCAAGGA-AATCAATGCCTGGGTCTAACAGACATTCCACTCCCAGACAAATGTATTTGATTTCAGATCATCCTTCAGTCTTTGTACTGGGAATAAAC-CTAAGACCAAAAGCTCTGAAAATAACAATGCAGGCG chr4 + 94230402 30222491 30222490 30223093 30222491 30222490 30223093 603 aatttttttttattttatttaaCTCACTTTTTCATT-TTTTCCATTAAAAAGGGAATAA--AGAGCAAGCGTCCTCCCTTTCAAAGTGCAATGCTGCCCTCTAG-AGCTGTCTGGAAGAAAATTACTTTACGAAACACGAAACCATCTCAGAGTAAACCACAGTCGTTCAAATGAGATTGCTGGATCTAGTCTCA-----TATTTATTCTCTGGATTGAAAACCAGTCT----------------GCACAGACATGTTATCTGGCTGAGCCTGGTTTACTGAC-AATCATTTTGCCAGCTCATCCAAATATACGATTTGTGCACTGATTGCAAAGCAAACAGAGGACTTCTCTCCTGTGTAAAACTGTGGGAAAACTCTA-GCAAATAAATTAAGTTATCGCTTCTTCGAGTCACTCAAAATAAGGAATGA--------CCATATAACTTTTCAAATCATGACTGCAAGGCTCATTTAGAAGATACTAACTGAGAAGGACAAGCTCCGGAACAATCAATGGGCAGGAAAGACAAGAATTCCGTTACCAAAAACAAGCATTTGATTTTAGATCATTCTTTAATCTTAGCACTGGGAATAGATGCTCCTACTGACAGGCCTGAAAATGATGGTTCTGGTG ...x..:.xx.x...x::..x:.......xxx::..-......x.....::.xx:x..:--.x..x:.x...::...xxx-..................:..:.-:.::.xx.:.x:x:.:.x:..:.xxx....:xx.:---......--------:.x:...:x.x.-----------..:...:.x..:.::-----.x..:..:.......x..x...:xxx...----------------.......x..:..x.....x.x.-....x..:..xx..-.....x:xx:x..x:.:....x..x...:..x:....::......:....:...:.x.x..-------------------:x...:.xx..:.:.:-x:.x.x........:x...--.:.:.x...x-----..:x:x..:...x.--------:........:...x:...:x...:..x..xx....:.x::....:.:.x........xx-.......x:.:.-........xx::..xxx:...::x.....::.x...:.x.x.x.:.........:.......:...:.:....x.:..........:.:-..xxx..::.x..x:........:.:::.x.x..:. 36M1D22M2D19M1I23M1D35M3I6M8I12M11I15M5D29M16D23M1I14M1D61M19I16M1D19M2I10M5I14M8D59M1I12M1I89M1I36M 356/550 64.7% 603/94230402 0.0% 88/550 16.0% 108458604 81755951 +3221 chr4 + 190214555 138681120 138681119 138681174 55 ACTTAGATGTTATTTTCCTTTAAAGGGCTGCTAGCCACAGAGACCGTTTTCCAAA chr4 + 94230402 29176012 29176011 29176066 29176012 29176011 29176066 55 ACTTCAATGTTATTTTGCTTTAAAGGTCTTCTAGCTAGAAAAGCTGCTTTCCAAA ....x:..........x.........x..x.....:.x.:.::.:.:........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 109505108 80709447 +3417 chr4 + 190214555 138682491 138682490 138682599 109 AAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAA chr4 + 94230402 89498607 89498606 89498714 89498607 89498606 89498714 108 AGGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAA-GAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGA .:.........x:...::...x:.:..x.x.:..::.xx.....-..:x..:..:x...x.::..::..:x::.x...x........:.:....x.:.x.:..:..::. 44M1D64M 68/108 63.0% 108/94230402 0.0% 1/108 0.9% 49183884 NA +3244 chr4 + 190214555 138682491 138682490 138682560 70 AAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 15856703 15856702 15856772 15856703 15856702 15856772 70 AAGACATGATAAAGAAAAAGAAAAGAAAGAAAAACGAGACAGCACTGGAGGGAAAGAAGAAAAGAAACAA ....x.x..x........::..:.........:.x:...x..x.xx::.::.......::.......x.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 122825788 67388767 +3470 chr4 + 190214555 138682500 138682499 138682600 101 AAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAAA chr4 + 94230402 15855375 15855374 15855475 15855375 15855374 15855475 101 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAA ..:..x.....:......:x::.x..:.:.:.xxx:..x..:xx...::.:.:.xxx...:...:...:.::..::.:......:.x..:......x.... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% 122827125 67387430 +12476 chr4 + 190214555 138688322 138688321 138688775 454 AGATTTCAGAAGCAT-----------ACGATTGAGTCCAATCATGGAATAAAGCAAATCCAGAATCATTTATGGGTTGAATGCCCCCATCACTGCCTT--AAGAGGGGTAGCTCCATCCCTTGGCCCACAG----CATGCAGGACAAAAGAGAGATGAATAAAGAGTAACTATTTACCAGTTCTTTATT--------------CTGTTACAGCCAGGAGCAGAAGCTGACATCCACAAGGACCCTTTTCAGCAAGGGATTATATATCACACCATAGAAATACATAAAGGATAAATTATATCCCTGAGATCATCATGCCTCCATTGACCTGCCCAAGGTTTAAAGGCAGCT-GCAATTAGGTGCTACAGTCACAGATCTGCTGGTAGCTTA-GCATGCCTGCATTCACTTTAATCCTGCAGAAATGGAGCCAGAATGAATTTTGTAGGCATGTCCTTCATCCAAGTTTGAATTCCACGGGTCTGATTC chr4 + 94230402 30229625 30229624 30230092 30229625 30229624 30230092 468 AAATTTCAGAAGCAGCACACATGCTGAGAGTTGTTTTCAATCAATAAATAACACAGAGGTTGAATTGTTCACCTGCCA-----CCTCATTACTGCCCCCCAGCAGAGGTGGAATTATCTTTTAGCCTCAAGGTTACTTGCAAACTAAAAGTTACATTTAGAGAAA-CATCTATTTGCTAGCCTTTTATTTTTTTCCTTTATTTCCATTACAGGCAGCAGCAGTGTTTGACACCCACAAGGACCCTTCTCAGCAAGACATTATATATCACTCCATGGAAATACATAAATGACAAAT--TATCCCTGATAGCATTGTGTCTCTGCTGACCTGCTCAAGGTATAAAGGCAGATGGCAATTAAATGCCATGGCTACAGACCTGCTAAAGGCTTAGGTGAAACCGTATTCATGTTAAGC------AAAGGGTATCTAATGGTATTTTGTTGATGGATTTCTCAAATGCATTTG-----CATAGTACTGATTC .:............x-----------.x::...xx.:......xx:.....x:..:.xx:x....::..:.:xx.:::-----..:...:......::--.:x..:...:.xx::...::..:...:xx..----.x....::x:.....xx.x..xx.x.:.:.-:.x......:.:..:::......--------------.::......x...x.....x:x:.....:..............:........:x............x....:............x..:....--.........x.x...::..:...:::........:......x.........x.-.......::...:.::.::.....:.....::x:.....-.::x:x.:.:.....:x....x.------...x..x::.x:.xx.x.......x.:::x:.:::...xx::x:....-----..::.xx....... 15M11I52M5D15M2I31M4I30M1D23M14I92M2D53M1I39M1I23M6D48M5D14M 293/435 67.4% 468/94230402 0.0% 52/435 12.0% 108458697 81755858 +22653 chr4 + 190214555 138702413 138702412 138703051 639 TCTCTTCCCTGTGACAAGTCGTGTCCAGGCAAAGCTTATTACAAATTCAGTTTGAAATCTCGAGAAGGAATAGGAAAAAAATAACAACAGCTTTATGGAGCTATGCTCAGGAAATGACTTGAACTCATCCCAATTTTAAAGTTCCATTCTATACAGCAAGCAGCTAAAACCCCATTTTCTG--GGGAACTGCCCTTACAGGGAAGGTGTGGCAAAGCCATCTGCTGCTTTAT---AGTGGTTTTCAGTCTTGTTTTTCTGGTCCAGCTATGAAATTGTACTAATCACAGAAACAGACTGTTTGGCCAGGAAGCAGTGTATGCCAGATACAAGTGAATTTAAGCCCACATGTATTGAAGCTGCAAGCTTAGTTTGCAATTT-ATGTGCAAGTGGTTTTGTATTTATTGATCTGGATCGAGTGCAGGTCCTATAGGAGAAATATGACAGATTTCATCTGTCTGACAGCCAAGTCTAATTGTATTTTCAGTCTAAAATGACCAAAGACAAAAGTACACATGTCGAGAGTCTTCACTCTGGTGCCATATGGAGTATTAGATACAGGACTGTGGTCA-CTGTAAGTGTTCATTTTAATAATTAGACACAGGCTGCATCCTGAACAGCTAAAGCA------AGAGAGGTGAGAGTTTT chr4 + 94230402 30236237 30236236 30236863 30236237 30236236 30236863 627 TTCCTCTTCTTTGATGTGCCTGAATTAAGCAGGGCATATTAAGAGCTA----TGAAGATACAACAAGGAACACACACAAAAAAAGCAGATCATTAAGGTG--ATTCTAGTAAGGCCATTTGAACAAATCGTGATTTTAAGGT-CCTTCCT---CGGAAAGATAC-GAGGCCCCATTTTCTGTAGGAAACTACCCTTTTAGGGAAGGTGTGACAAAGCTATCTGCTGCTTTATTACAATGGTTTT---------TTATGTGGCAGAGCAGGGAAGCGGTACTGATCACAGAA-CAAGCTGCTCAGCCAGAATTCAGTGCATGCCAGATTCCACAGAATCTTAGCCCACGTGCATTGAAATTGCAAGCTCCACTTGCAATTTTATGAGCaatttttttt-tatatatttat-tGGACCACATTCAGCTCCTACAGGAGGAATATGACAGATTTCATCTGCTTGACAGCCAAGTCTAATTGTGTTTTCTGTATGAAATGACCAAAGACAAAAGTGCACATGTCTAGGTACTTCAGTGATGTGCCATATGGAGTTTTAGATAAAGG--TTTTGTCAGTTGCGAGAGCTCCCAACAATAACTGGACACGGCCTGAATTCTGAGTAACTGGAGCAGCAAGGAGAGAGCTGAAGGCTTT .::..:::..x...::x.:.xx:x::.:...::..x.....x:.::.x----....:x:x.:.x......:.x:x.x....x..xx.x.x.x...x..x.--..x..x:x:.:::x.:......xx...x::.......:..-..x.:..---.:.x...xx:.-:.::............--..:....:.....x:............:......:..............---.:.......---------..x.x...:xx...x:x...::x.....:.........-..::...:.::.....:.xx.....:.........x.x.xx....:.x.......:..:......::........:x::.........-...x....x.xx....-...x....x..-....:.:x:.x...x.....:.....:....................::....................:.....x..x.:....................:........x..:xx.....x.xxx..............x.......x...--.x.x....-:..::..x.:..x:xx:.....:.:.....:.x...x..:....::.:..::....------......x...::.:... 48M4D48M2D40M1D7M3D11M1D16M2I49M3I9M9D38M1D88M1I16M1D11M1D152M2D8M1I56M6I17M 444/614 72.3% 627/94230402 0.0% 38/614 6.2% 108466176 81748379 +11294 chr4 + 190214555 138708180 138708179 138708431 252 GCAAGAATAATTCCCCAAGGAAAAGGAAAAAGGCTCTCATCTTCCTACCACCCCCACACTGCAGCAGGAATACGCTGTTTTTAAAGGGTTTGTTCTCAGGAGAAAATGCCATAAGCTCTATTTATCTGTAA----TCCATTTCTCTCTCT-ACTCCAAGATTAAGGAATTAATGACTGCTACAGCTGCTGTCCTTAGCACATTAATTACTGTAAATTGTCTGCAGCCTCCAAAATAAAAATTGACTCACTGACAACG chr4 + 94230402 30242262 30242261 30242517 30242262 30242261 30242517 256 GCATGGAGAATTCCTTCCAGCAAAGGAAAATTGCTTTCATCACTGTGTTGGCTAGTC-CTGCTACAAGAAGGCAATATTTTTATAGGGCTTATTCTCCGGAGAACACGTCATAAGCTATATTTATCTCTAACTAATGCATTTCTAGCTCTTACTCCAAGATTAAGGAATTAGAGACTGCTACAGCTGCTGTCCTTATCACGTTAATTACTGTAAATTGGCTGTCACCTCAAAAAAGAAAATCCACTTCCAGGGAATG ...x.:.x......::xx:.x.........xx...:.....x::x.::::x.:xxx.-....x:..:...x:.:x.:......x....:..:.....x......x.:.:........x.........x...----.x.......xx....-....................:x.......................x...:.................x...:x:....x....x:.....:x...:x.x.:x..:. 57M1D73M4I15M1I106M 187/251 74.5% 256/94230402 0.0% 6/251 2.4% 108465918 81748637 +3228 chr4 + 190214555 138712768 138712767 138712849 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCACTGGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........x.::........x.xx.x...x....x.....::.:..x:xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 62679567 NA +3216 chr4 + 190214555 138712913 138712912 138712966 54 AAAAAAAAAAAAGATAGATATATAGATATACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ....................:.:.x.xx..x....:....::..x:........ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 82983420 NA +3131 chr4 + 190214555 138720086 138720085 138720157 72 GCACTTGTAATATCAGCTACTTGAGAGGCTGAGGTATGAGAATTGCTTGAACACGGGATGTAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.x:...........:........x:x..x...x::.......x.:.:.xx.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 62686880 NA +9619 chr4 + 190214555 138721609 138721608 138722642 1034 TATCATTTTACATT-TGAAATTAAGAAAGTTAAGACAGGCCTTTTCAGACCTTATGAGAAATATCATTTCTCTAAAACTGCTTTTCTTCAATGAAGTATCATAAATTGACCAAGAGGGATGTTAACTGCGTTAACTTTTTAAGATTCTTTCAAGTCTCTGTCCTTTGTGAAATAACTATAAATTTAGGTTGGTGGTTCAAATGGCTTTTTCCCCCCACAACAAATATGAATAAGATAAATTGTACTAAAACTCTTTTATGCTTTATTGAATAACAGCCAGTAATAAAG-CAGGCTCAAGAGAGCAGAGTCTAATATCAGATGCATGGC----ATAGCTTTAAATATCTTCTATGGCACT-------------GGATAGCAGATTAAA----------------ATCGGTCCCTTT----ACTAGGAGATTCAAATTGCCTCTTCTAGACTTTTCAACAAGAACTTTTTGGTCTTTCCTTTTGCAAAGTGATAAGACTTTCTTTACCTACTTTGTATACAATCTGTGTTTCCTTCCAAGAAAACTTTCCATTTTCACCACAACCTAAGAAAATACTA----GCTATTTTCTGAAAAGAAGCTG---------------ATTCATGATTGCCTGGGTTTCAACAATATAACACTCTCTTCATTGTGAGTATTGCCAGTCATTGTCAC-----CAAGTTA------AAAGACAAACCCAAGCTATCATCCTTAGTGACTCT--ATTGTTTTAAGTTCAGGAAACTTCTCAAAT-TCAT--AGCAGGGGAAGGAA-----TTACCAACGTAAATCTTTCTTGGCCCATATATTTGCTCTCTGACCCAGGCTTTTTTGCTTTAAA-TAATTGGGCATTTTCCCCAGAGTCTGGA------GGGATAGTGCCTTTCTTCTGTAT-ATACGATCATTTCAAATCCAACCTCATATTCACATCTTCAGTGCCTTCCTTTATAAGGCAGAAGAAAGGAGAACCCATACACTAAAACATCACACTAAAATTTCT------------AACATTCA--CTTCCAGA-TCTGAAGGTAATTT-----------TTCCCCAAATTTTACTACATTTATAAAAAATGCAGAATTCCACCTAGAAACAATCCAATTAGACTTA chr4 + 94230402 30244361 30244360 30245385 30244361 30244360 30245385 1025 TGTCAGCTCTCATTCTAAAACTAA--ATTTCAAGACAGACTGATTCAGCTCTCATGAGAGATGTCATTCTATTGAAACTATTTATTTTCG--GAGACGCCATAAACTGGCTGAGCAAAATCTTAACTGCATTAAGTTTTTAAGATTCTTTCAAGCAACAAT--TTCATGAAATAGCTACAAAACCCA------GGCTTAGA----------CCTACACATCATCTCCTAAACAGAAATCT---------ATTCTGACATGTTTTATTGAACATAACCCAATAATAAATCCAGACCC-----TGCAGACTGT-ACGCTGGATGCATGGCTGTATCGGGGCAGAATTCCCACTGTGCCATCACATTAGGTTCTGGAATGACAGATTCAATTGCCTAAATTATGGGGTGGCTGCCTGTGGAGATTAGGGGACTGATGttttttttttttttcttttt--------cttttt--ttcttttttttGAAAACCTA------CTACTTAACCTAC-------------------TCTTTCCAGCAAA---TTTCAT---------------GGAAGATTCTATGCTGCTGCTAGCTAAAAGGAAGCCGCTGTTGTATAAACCAGTTCATGGTTTAAACAGTTTAAACATAGCATCCCATTCTCCA----GGGCACGGAAACTCGTTACCATACCCATAGATTATGTGGCAGCAGCAGCCTTGAGTAGTGTTCTTCAGTGACCCTTATTTATTCTGAGCCCAGGGAGCTTCTCAGGTATCATCCAACGGAGCAAAAAAAATCTCTCCCGACGTCAATCATTCCTGGCCCGTGTG--CACTTTCTCACTCATGCATCTTAACGCTAAAGTGATTGGTCTTTTCCCTCTGGAGCCAGACTGAATGATATAGCAGCTTTCTCAGTTGTGATATTAACATTTCAAGTCAAGCCTCA-ATCCACTTCTCCA-----------TCTGAGAGATAAGATATGAGACCTTAGGCCTGCAAGCACTCCAGGGAAGCTTATTCTGATTCTCAAAACCTCCAACCTTTTAGAGTCTGGAAGTCTTTTGGTAACCAGAACGCCTCAAGTTTGAATTCTTCTCTTGAACATG--------------GAAATAAGCCACTGAGATTTA .:...x:.:x....-.:...:...--.xx.:.......:.:xx.....x:..:......:..:.....::x:.:.....::..x.:...:--..:::::......:..:.::..x:::..x........:....x...................:xx.x:.--..::.......:...:...x::x:------..:.:.:.----------..:x....x..xx.x:x..xx...x.xx.---------.:...xx:...:.........:.xx.x...:.......x-...:.:.-----x.....x.x.-.:::::..........----x::.xx:x:...x:.:x..:..x..::-------------.:..::......x..----------------:.x.x.x...x.----.:....:..:.x.x:..x::.:..:.xxx.....:--------......--.::..::.....x...x:x.------:.x...x......-------------------..:.....:x...---..:...---------------:...:..x...----...::.xx..:...:.....:.---------------:......:..xxxxx:....x....xx::.x.x.x:...:..----.:.:.:x.xx.x..:..::..:-----:.::...------.:x::..:x.:::..:x:.xx..:.:......:..--x..:..:.:..::....:.:.......::.-....--.:.:.:.x..::..-----:.x..:....x....x...:......:.:.:--::..:...x..:..x..x.:..x:.x:....-.:.....x.x...:..:.x.::x.::..------.:x....::x......:xxx.:.-...:x.x........:..x.:.....-..:...x...:..-----------.x.:..:x.x....x.x....x.::.x:.x:xx..:..::x..xx:..::..x.------------...x.:..--...::...-....:.:..xx...-----------:x..:...:...x.x.x.x.:.x.x:..x...--------------....:..x...x.x...:... 14M1I9M2D64M2D69M2D24M6D8M10D29M9D39M1I7M5D10M1D16M4I27M13I15M16I12M4I35M8D6M2D20M6D13M19D13M3D6M15D11M4I22M15I42M4D22M5I7M6I35M2I30M1I4M2I14M5I31M2D31M1I28M6I23M1I26M1D13M11D54M12I8M2I8M1I14M11I32M14D21M 583/912 63.9% 1025/94230402 0.0% 235/912 25.8% 108477248 81737307 +27848 chr4 + 190214555 138724585 138724584 138725564 980 TTTCTTCTCTTTCAAAAGCACTGACACCTCCTAGCCATCTAATCAAGACAAATCTTTCATGCGGTAATTAACATACAGCTCATCTTCAGAGGGAACAGCAAAACAAAGGCTGAAACAATTAGCTGACTGTGCCAAACAGCATGGTTCGCCCCCTCCGGCCCACACCTCTCCCTCTCTTCCCCATTCTTTCAATTGCTTGC--TTTTAAGTACTGTTTTTTCACAGGAAGAAAAACTTCATTCCTGCTGAAAGGTAAGAAACTGAATAGATACTTAGACTAGGAAATAGCTTAATTGAATTTCATATGAAAAAATGCTTAG------GACTGTTTAAGACAAACGTTGGGTTCCCCGCTCAGCTGGAATTGCATTAGATGAGAAA-GGGATTCAGAGATACTCGCTAATCTGTTACCGTCAGGTTAGAA-CAGAATATTGCAATTAGCATGCAAAAGGACACAGGCCGGCAATACAGGGAAAG--AGAAGTCTTTCCAGAATGAAGACTGCAGAGTAGAGAGGTAAAT-TGTATGAGTAATAACTCAGAAGGTAGAAAA---TGAACTTGCACCTCATAAGGCTGTGTGTGCCTTGATTACATTAGCACTACTTGCAATATTAAGCAGTATATTCATTTTTATTGTATTAGTT--TTTGAATAGTCTGTAAAAGGCCAGTGTTTCAT-TTAGCTCCCTGAGCC-------ACCTGTCTTTCCTACAACATCCCCTACCAGCACATTCAA-GCATTAGCGTTCAGGATTTCTAAAATATTGTAGCCATTGATGGCTGCCAGCAGTCAAATTAAATTCAAAGGGTCTAGTATCGCTTCAGGTTTTAGCTATATAATTTACTAAGAATGCCCAAAGCACTTGCAATCTAATTTGCAGTTCAGCAATGAATACCATTTCCTAACAAAATATGCCTGAAA-TTTCCTTTTAAGGCTCTAGAAAA-----AATACACTTGTGACACCTGTGTGCCTTCCTTCTGGCACTGACTCCAAAAA chr4 + 94230402 30247971 30247970 30248918 30247971 30247970 30248918 948 TTCCCCCTCTGCAAAAGGCACCGAAGCTTTCCAAT--TCTAATCGAGACATCTCTTCCATACAATAATTAAAATACACCTCAAATTCAAGGAGA---GGATAACAAAGGCTGAAACTATTAGCTGACTAAGGCAAACTGCAC--------------------TAGCTTTCCTCCTCCTCCAC-------TAACAGCAAACAGTTTCAAGT----TTTCCAGGAGAGAAAAAAAAAAAAAAAAAAGCTGAAAGGCAGAAAACAAAGTAGACACTTAAATTAGAAATTATTTAAATTGAATTTTATATGAAAAA-TGCTCAGCAGCCAGCCTGTTTAAGACAAATTTCAAGTTTTCTGCATGGCTGGAGTCGCATTAGCACAGAAACAATAGCCTCATGTATTCGCTAATCTATTACCATCAAGTTAGAAATAGAATACTGCA-TTAGCATGCAAAGGGCTGCAAACCAGCGCTACAGGGGAAACTGGAA---TTTCTATGGTAAGCACTGCAGAATGGCAGCATAGATGTGTATAAATAATGAGTCAGAAGGAAAAAAAAAGTGAGCTTGCACGTTCTGAGGCT-TACGTGCCTTGATTA---TAACAC-------------GGATATTACATCCATTTTAAC-GTGCCAACTGTTCTAAAAGGCCTACCAAAGGCCAACCTTTTACACTTGTTTCAGGAGCCTCTCTTTCCCTCTCTTTC-----ATTTCCTCAAGAAAAATATTAAAAGAATTAAAGCTCAGATGTCCTGAAATCTTTCATCCACTGATGACTGCCAACATTCAAATTAAATTCAAAGGGTTTACTCCAGCTCTCAGCCTTAGCTGTATAATTTACAAAGCTTGCTCAGAGTCATTCCAATCTAATTAGCAGTTCAGCGGTGATTATCACTCGCCGACTGTACCTACCTGAAGTTTTTCTTTTGAAGATGGAAAAAAAAAGGAAAAAACTTTTGACACCAGCGT-CTTTCCTCTGGGCAATGCTTCGAGAGA ..:.::....x:x...:....:..x:.:.:.:.::--.......:.....xx....:...:.::.......x.....x....xx....::.:..---.x.x...............x...........:x.x.....x...:--------------------:.x..:...::...:...x.-------:..:x..xx:.--...:....----...::xx:x::...:.....xxxx.xxxxx.........:.::....x:.:....:.....:.:...:..x..x:.x..........:..........-....:..------.x..............:x.:::...::.:..x::......:.:.......xxx.....-::x.x:.xx.x:..:..........:.....:...:.......-:......:....-............:..x::..::..:..:x.......:..:--:...---....:.x::.:.:x........:.:.x::x:..:..-.....:.:....:.x........x.:....---...:.......x.:x.:.....-.::............---..:...-------------::::.x..:..:......x.:-..:::.::.--.:.:..x:.:..::x........::x...:.:-:.x.:.:.xx.....-------x...x......-----.:x...:.x.xx.:x.:...x..-.x....:x.:....:xx.:..:....x..x:.x...:.....:......:..x....................:..x.x:x...::x:.::......:..........x...xx...:..:..:xx..x..........x..........::...x..:..:.:x.::..x:x.:x.:......:-...:.....:.:.x.xx.:....-----..x.x....x.......x.:..-.:.....::x....x..x:..x.:.:. 35M2D57M3D45M20D20M7D11M2I8M4D98M1D7M6I58M1I43M1I12M1D40M2I4M3D36M1I30M3I22M1D15M3D6M13D21M1D9M2I32M1I15M7I11M5D23M1I185M1I23M5I22M1D27M 635/915 69.4% 948/94230402 0.0% 98/915 10.7% 108476614 81737941 +3001 chr4 + 190214555 138748113 138748112 138748159 47 CTACAGAATACCAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAA chr4 + 94230402 54892536 54892535 54892582 54892536 54892535 54892582 47 CCACAAAATAGGAAAGAAAAATAAATAAGAGAGAAAGAGAAAGAAAA .:...:....xx...:.....x...x........:............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 83855577 NA +3119 chr4 + 190214555 138748113 138748112 138748183 71 CTACAGAAT-ACCAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAAAAGAAAAACAGAAAAAA--AAAAACC chr4 + 94230402 89572256 89572255 89572329 89572256 89572255 89572329 74 CCACATAATCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGATTAAAAATC .:...x...-.x..:...........................x::x...:.x.x..:.:...x:.--.....:. 9M1I55M2I7M 55/71 77.5% 74/94230402 0.0% 3/71 4.2% 49175857 NA +3255 chr4 + 190214555 138748122 138748121 138748160 39 ACCAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAAA chr4 + 94230402 75300453 75300452 75300491 75300453 75300452 75300491 39 ACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ...................:...........:...:... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 63447669 NA +3035 chr4 + 190214555 138748125 138748124 138748158 34 AAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAA chr4 + 94230402 75300458 75300457 75300491 75300458 75300457 75300491 34 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ............................:..... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 63447667 NA +3392 chr4 + 190214555 138770325 138770324 138770397 73 TGCACTTGTGGTCCTAACTACTCAGGAGGCTGAGGCAGGTAGACCACTTGAGCCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:.:.:.....::::........x.xx..::.x.......:.....:..x:xx:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 62737120 NA +4068 chr4 + 190214555 138774249 138774248 138774321 73 TGCACATGTAATTCCAGCTACTCAGGAGGCTGAGCCATGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:....:...........::::..........x..x...x.:........::.:..x.xx:..:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 62741044 NA +3249 chr4 + 190214555 138776542 138776541 138776611 70 TGAAAGGACAATGTGGTTTTTTTGTTTGTTTTTTGTTTTTTAAGAAAAAAAAGAACATTCATCAACAACA chr4 + 94230402 44279533 44279532 44279599 44279533 44279532 44279599 67 TGAAATGATAATATGAAGATTTTGTTTGTTTTTTGTTTTTT---AAAAAAATGAAAATTGATGAGTAATA .....x..:...:..:xxx......................---.......x...x...x..x.::..:. 41M3D26M 53/67 79.1% 67/94230402 0.0% 3/67 4.5% 94497009 NA +3128 chr4 + 190214555 138781105 138781104 138781152 48 CTCTTTTTTGGCTCCATATAAAATTTAAAGTAGTTTTTTCTAATTCTA chr4 + 94230402 10310963 10310962 10311010 10310963 10310962 10311010 48 CTCCTTCTTAACTTCATACAAGATATAAAGTAGTTCTTCCTAATTCTA ...:..:..::..:....:..:..x..........:..:......... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 128470142 61744413 +3318 chr4 + 190214555 138793696 138793695 138793790 95 GAAAGAAAGAAAG---AAAGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGA-AAGAAAGAAAGGAGAA chr4 + 94230402 44866507 44866506 44866605 44866507 44866506 44866605 99 GAAAGACATACAGGACAAAGAAAAACAGGGACAGCAAATAACTAGGAAAGAAATAGAATAATACAGAAAAAATGACAAAGGAGGGGGAAGAAAGAAGAA ......x.x.x..---.........x:::.....x..:x...x.:........x....x:.x.x.:..:...x:.x:..:..-::.:.......:.... 13M3I66M1I16M 67/95 70.5% 99/94230402 0.0% 4/95 4.2% 93927189 NA +3412 chr4 + 190214555 138793703 138793702 138793806 104 AGAAAGAAAGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAG---AAAGAAAGAAAGAAAGAAAG-GAGAAGAGGGGAGGGGAAGGG chr4 + 94230402 78963403 78963402 78963509 78963403 78963402 78963509 107 AGAGCAAAAAAGAAAAGAAAAAAGTTAAGAA-AAATGTAGAAAAAGTAAGACTGAAATCAAAGGTTAAGGAAATAAAGCCTGAAAATGAGAAGGGGGGTGGGAAAGGG ...:x:...:.:.......:.x..xx.::..-...x:x........x....xx....xx....---..:....x....xxx....:-......:....x...:..... 31M1D31M3I20M1I21M 75/103 72.8% 107/94230402 0.0% 5/103 4.9% 59830300 NA +18396 chr4 + 190214555 138800510 138800509 138800952 443 TTGGATATT--GAGGGACTACATACAGGATGACAATTATAAACACACTGTCTCTAGAAAAACACTTCATTTACAAAGCAGATTTGACAGCTCAAGTTGCTTTTTG-GCAGAGCAGTCCTGCCTGGCCCCTGTGC-------GACCTGGTGAGCTTCGATTACAGCATTGATGCTGGCTCTACTACAGAGACCCCCTAAAAGGGGAGTGATAAATGAGGTCCTGTCAGGCTTCATTCCCTGGGTGGCCTTGAATCTCTGCCGTTATCTGTTACCCTGCCAGTACTGACAGTGATGAACACAAGGCAGGCAGCTAATGACACCCCGATTCATTACCCAAAAAGAAGGGAAAGCAGAAATAAAGGGAAGGT-GACTGCCATGTGGAAGCTTGTCTCACGTCAGTGC------CGTCT----TCCTCCTACAGG-TTTGAATGGTGAAGAAATGATGGACGCTGTTTGT chr4 + 94230402 30267193 30267192 30267644 30267193 30267192 30267644 452 TTGTATATTATGAGGGG-TATGCTTAAGGTGATGGTTATAAACACG--GTCTCCAAAAAAACACTTCATTTACAAAACAGATTTGACAGCTCGGTTTGTTTGCAATGCAGAGCACTCCTCCCACGCCCCCCCCCCCCCCATGGTCTTGTGAGCCTTGATTACTTCTTTGATGCCAGCTCTTCCACAGAGACCTCC-GAAATGGAAGTGATGAATGAGGTCCTGTCAGGCTCCATTCCCTGGGTGGCCTTGAATCCATCCACTTATCTGTTACACTGCCAGCCATGACAGTGACGAACGCAATGCAGGCAGCTGACAACACCCCTGTTCATTAC-----AAAAAGGAAAAAAGAAAAAAAAGGAGAGATGGAAAGTCATAT----GCCTGCCACCTTTCAATGCTTCACTCATCTACACTACTTTTATAGGACCTGCTTGGGGAGGAGGTGATGAAGTCTGTTTAT ...x.....--.....:-..:::x:.:.:...:::..........:--.....:.:....................:...............::x...:..x:x:-........x....x..xx.....:x:x.-------.::..x......:.:......xx.x.......::.....x.:.........:..-:...x..:......:...................:.......................:x.x.xx...........x.......:xx.........:....:...x..........:.::.......x:........-----..:....:...:x::...x.....::..:.-..xx.:...:.----..:..:.x.x:x...:...------.:...----.x..::..:...-::..xx...x..:..::.....:.xx......:. 9M2I6M1D28M2D57M1I28M7I54M1D137M5D30M1I11M4D19M6I5M4I12M1I34M 325/430 75.6% 452/94230402 0.0% 35/430 8.1% 108533317 81681238 +30040 chr4 + 190214555 138803434 138803433 138805322 1889 AAAATTCTTTTTTTCCTACAACCAACTGGGT-----ACCTTCTACTTTTT-CTGTGAA--GGCATTTATTTCTGGCTGGTCAATCTGAATT--GTTCCATTATCTTGCTACCCACTAGTGATGAATAAACTTCCTTATTTCTGAGTTCTTTGAGACCTGAAGGATTGATGGGCAAGAAGGAAGAACCGGGACTGCCAATGAAGGCAGGAA------TTCATCTTATTAG---TCTCTGGTTTGAGTTAATCACTGGGGAGATAATATTTTAAACTCCAAAAG--ACTTCATGAAATTTTCCAGAATTTCTCCAGA--GACACAGATCAATAGACCAGAATAATCAAGAAAAGGGAGCACGTTTGCCAAATGCCACTCACTTGGTAGGGTATTTCACTTGAGTGAGCAAAAGGGTTTTTA-TGGAATTATTCCAGCCCTATGAAAGAAGGAGCAAATCAACCCTCCAGGAAAGCTCCTCCAAATTGCAGCTAAAGATAAAAGAAAGGGTGACATTTTAA-----TTCCAATCTTCAATCCTCAACAGAGGGATGCGGGTGGCACTTATTTGTTATGTTGTTCAGTTGATGAACAGCTTT----CCCATAGCACTGAG-------CAATCACTGCCCTGTACT-----------CTCAAAATAATGCATGGTGATATGGGGACCCAGGGCCCCATAATTTTGCCAATGGCTCGCCTCTTCTCTTTCAGCAAGAAGCAACCGAA-----AATGAAGCCTGCCTGATTGCTATGAGGGTTCCTCGGGCTTCAGCGATGTTTAA-ATATTAGCCCCCAGAGCTCAGAGCTTAACTCCCAGCAGCAAAACAGTTATCTACC----CTGGTACCCTGAGCCAGGCATAAAAATTCGAAAATTTTAAAGCAAAGTCTAAGTTTAAAAAAGAAAATCACACATGGCGGGGTACAAGGAATGAATAAACCTCCAGCTCCCAAGAACATTTTCCAAAATGGCTCCTTTACCATTTCTAAATGTGAAGCACACAGATCTCCGGGTGTGGGACTCTCCTGCTTCTAGATGCCCCTCTCCCTCCACACTGTAAGCTTTCTCTGCACCTGCACCTCCTCTAAGACTTGGCTCCTTCCTGATCATTTCTGCCTTCAATGTGATATGCTCATCTTATTTTCTTATCCTCTCTCCTCTCCCTGTTCCATCTCTTTCTCTGTACCT--CTTTATTCCTCTTCATCTCCCTCCAAGCCCCTTTTGTCTCTGGTTATGGCAGCCACTTAAGCAT-TGGTGGGTGCTCGAACTTGGCTTACCTGACAGGGGGTCC--CTGAGGCTGTCC--------------AAGAGAAACAAGACCCTAAGAAAGTATAAAAATCT--GAGCTGCAACAAAGCATTTTTTTAACCTGAATTCAAAAGTATTTTCCTTAGCCCGTGCTGCATGTGCTGTATTGTTAACTTCTATCAAAGGGGTTCATATCTCAGGAATCACGGGAAACTTTCAAAC---ATGATTGATGGCCGGTCAAAAGAA-CATCCACAGCGCGATAAGCTGCAGA-GAGGGAATGTGCTGAGCC-GGTTCAGGATTGCCTGGCTGTGCCTTTCAAATTCCTTTCATCGCAATCGGTGACTGTAAGCACTGCAGGGTGAGAACAAGCCAGGACTTTGTGGAATATTCTTAACTGCTGATATGTAATCCATACAGCTAGTGGTAGCAGCCCGAGGATAAAAGATTTAAAGAAATAGAGACACAAGGACTGATTTTTTTTAAAAAGGCAACTTGGAAGGAAAAAAAAGAGTGAGAACAGTAAGATTTATGTTAACCCATTGGGAGTGCTCTGGAAATCTCTTTGATGAAGGATTGAGATTGCTTTGAAGCAGACTTTATTGAAG-CAAAAAGTAAGTGCAGTGTCCAGGGACTTGGGTCGACTGGGTCACTTATCAGTCTTCCTGACTTTGAGTTTCCTTTTTCTTCC chr4 + 94230402 30272035 30272034 30273723 30272035 30272034 30273723 1689 AAAAATCAGTTTTCTCACTTCCCAGCTGGTTGTTGAACTTTCTGCCTTTTGCTGCAAATAGCCACTGAAGTCTGACT----AATCTGGACCCCTTTCTATTGCCTTTCTATCCACTGGTGACAAA--AATGTCTTCATTTGCAAGTTCTCTGCGAATTGTGGAGCTGATAGACAAGAATGAACTGTCAGCGTCGATACTGA-GGCAAAAGAATATGTCAATCCTGCCAGGGCTCTTTTATTCAAGTTAATCAAAAGCACAGGAATATCTTAAACTCCAAGAGTGACTC---AGAAATTTCCAGAGTTTCCCAAAAATGCTTCTGATCAATGGACCAGATTAATCAAAGAACGGAGAAAAGCTCACAGCTTGCAGTTCAATTACAAGGGTGATTCACTTCTAAGTGTACAAGGCCTTAAAATGGAAATAACCCAAGCAAAGGAAAGAAG---CAAATCAAAGCTCTGGGAAGAACACTATCAGT-GCAGAAGCAGGGTAAAGACAGGA-GTTATTTTTACTCGTTTCTAACTCCCAGCCCATAAAAATTAAATACAACTCAAACAGAGAGGGAATGTT--TAAGTGAATATGTAGGATCGTAGCCCAGAAACCTAAGGCCACACAAATTACTGCCTTGTCCTGTAGGATCAGCCTCCCCATCACCCTTGATGTAATAG---CACAGGGTCA---------GGCAGAGGCACGGGCACACTCCCACA--AAACTGCATCTGAGCCCCTGGAAGGGGCTGCATG----------GGGCTCCTCACACTGCTTTGACTTTTGACAGATCAAACCCCCAGTTTGAGGGCCTG--TTTCACCAGCCAGGCAATGCTCTGCCGCTGCTAGCAAGCTT-GCCAGGC---------------TTCCAAAGC----------------------------------TGAAGTAC---------------------TCTTCAAGAACCTTCCCAGAAAAGGT------------------------------AAATTTTGGAGACTGAAA------------------------------------GGAAGCT---------------------CTAAG-----------------------------------------------CTGGTGTCCTGTTCTTCTCTCCCATTCCC--TCGAGCTCTT---CTGTGGCAGACCATATGCACCTCCATTTGCCTTCAGACCTGTTCCTCCACTGCTTCTAATTGCTGCTTACGCACATAGCGGTCTCTCA-----GGCTAACTAG---GGGGGTTCTGCTGAGGAAAACCTTTTACTTTTaaaaaagggagaaaaaaaaaaaagaaaagaaaagaaaCCCAGAGTCAGAACAAAGCAGTTGTTTAACTTGAAACCCAACGTGCCGTTCTTTCCTCACACTGTATGGACT--ATTGTTAACTTTTATCAGAGGAACAGATATTTCAGGAACCGCTTCAGAGTTACCACCGCAATGATTGATGACCGGTCAAAAGAAACATCCAGAAAGCAATAAGCTGTAAAAGGGGGAATGCACTCAGCCTGGTTCAGGACTGCCTAGCTGTGCCTTTCACATTTCTTTCATCACAACCG-TGACTGTAAG--------GGTGAGAACAGGCAAGGGCTTTGCGGAATATTTGGAGGTGCTGATAGGTAATCCGTATTGCCATCAGCAGCAACCTGAGGATAAAAGTTTTAAAGAAATGGAAACACAAGGACTTGT------------GGGGGCTGTGAAAGACAAAAA-GAGCGAGAACAGTGAGATTTATGTAAACCCACTGGGAGTGCACTGGCAAGCTCTTTGATGAAAGATTGAGATTGCTTTGAAAGAGGCCGTATAGAAGAAAAAAAGCAAGGGCTGTATACAGAGAGGGAGGTTAGCCAGGTTACTTATCAGTCCT----GTCCTGGTTTTCCCCCTTCTTCC ....x..xx....::.xx:xx...:....x.-----..:....:.:....-...::..--.x..:.x.xx....:..----......:.::--x...:...::...x...:.....:....::..--..:x..:.:....x::......:..x..x:..x:.:::....:.:......x...xx::.:.x:::.x:.x...-....::.:------.:x...:.:::..---...:.x:..::.........xx:.x:x::x.....:...........:..--...:---::..x........:....:.x.:.--.x:x.x.......:.......x.......::..x..:::x.x.:.::.x:xx...x::...x..:xx.....:x.......xx:x.x.:.x....x:..xx.-.....x..x:...:x.xx.x........---........xx...::....::x:x..x:x.:.-....xx:x..:xx.....x...:-.x:.....x.-----...:..::::..::..x:..x.:xx::..:.::x.x:x..xx.xxx.xx.....--.x...x:..:x::..xx.:----....x.:xx..:..-------x...:......:...x..-----------...xxx..x.:x.x..:..xx..:.---.x.....:.x---------.x..:x...x..xx:x:x...::x..--..:xx...x.:..:-----::x:::.x....x..----------...:.....:x:..x.xx:..:x...:.-.x..:.:x....x::x:.x..:..:.:--.::..x....x.::..:.xx...:..----..:.:.xx..x-.......---------------..::.....----------------------------------:.::....---------------------::::.......x..::.x:...x..:------------------------------.:..:.:x.:.xx..::.------------------------------------.x.....---------------------.....-----------------------------------------------..x:.x.:..xx..:.......:x.:..:--..x.x.....---....:x.x--.:x...x.x:..:...:.x...:..::..:x..::x:.x...x..x.:::x..::....x...:-.:.:..x:x...:-----....x..:x.---......:.--......xx:x..--------------...:..:.x..:.xxxx......:x.x..:..x.:--...:::x.........x..x......:....x:.x..x..:::x.:...xx.:.:::...:...x:..--...........:.....:...:::xx....:.......:.:.xxx.:.x..x.x.x.---..........:.............-......x.:x..:........:.:.-.:.......::..x....-.........:.....:.............x...:........:...:..-..........--------..........:..x...:.....:........:xx.:x........x.......:..:x..:.x::.:....:..:...........x...........:..:...........x:.------------..x::..xx...:..x.....-...:.........:..........x......:.........x....x..x............:..................:x..:.:x...x....-x......:...x..x..:.x...:..xxx:...:::.::...:...........:.----::::..:x.....:::....... 31M5I14M1I7M2I17M4D10M2I32M2D74M1D8M6I13M3I50M2I4M3D24M2I102M1I28M3D32M1D23M1D10M5I54M2D19M4I14M7I18M11I25M3D10M9D26M2D14M5I15M10D28M1I27M2D26M4I11M1D7M15D9M34D8M21D26M30D18M36D7M21D5M47D29M2D10M3D8M2I64M1I13M5D10M3D8M2I12M14I35M2I68M2D57M3I24M1I25M1I18M1I49M1D10M8D117M12D21M1D97M1I56M4D23M 1068/1600 66.8% 1689/94230402 0.0% 378/1600 23.6% 108531399 81683156 +3296 chr4 + 190214555 138809301 138809300 138809366 66 TACACACACACACACACACACACACACACACACACACATACACACAGTCACTCTTTCATTTTTTAT chr4 + 94230402 66743633 66743632 66743698 66743633 66743632 66743698 66 TAAATAGATACATCTACACCCACTCAGGCACACACACACACACACAGTCAGTCTTCAGGTTTTTAT ..x.:.x.:...:x:....x...x..x:..........:...........x....:x:x....... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 72065668 NA +3158 chr4 + 190214555 138814193 138814192 138814261 69 GTGGTGGCACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCTGGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x....:.:...........::........x.xx.x...x::.....:..::.... 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% 62780992 NA +20380 chr4 + 190214555 138819689 138819688 138820201 513 CTGTTTCCCATGGCAGGATGAATGAGGTACAGAGTGACTCTCCTTATTGTGTTAGAAATGCAAGGGTCACTCACATTACTTACAGAGCCCCTTGTTTACATTTTTCAATTAGGAGATAATCAGTATGCCATTATGAGTAAAAATTGTTGGAACGATCTTTTGGCTGTATATTTTAACCAGCAAAT-CTTTGGGGAAGGTTTGATTGAAAGTATGACAGGAGAACAAGGCAAGTTATACTGATGATAAATAAGAACAATTATCACACTTATTATCTGATAAATAATTTATTGTGATTTGCCATGAATCCATCTCAAGCCACCTCCTAGATGAAAACACACCCCAAAGACTGACTTC--TTCAGCTTTTCCCATGTCATGTCAGAAATTCTTGCCTGAAAAACACAAAGGAAGCA-TTGCCTGGAATATAAAGGCCTGTCACTACATACTTGATCATTTTAATCAGTTGCAGATAAATTACGCCCCTTATATAAATAGTAAATCAGTACTTCTTTCTCA chr4 + 94230402 30280762 30280761 30281268 30280762 30280761 30281268 507 CCATTCTCAACAGCTGGCTG--CGAGATACACAGGGATTCTCCACGTTATGCT-GTGAGGAAAGGGTCACTTGCATTACTTACAGTGTCTGTATTTTACACTTTTCAATTAGGGGGTAATCAGCATGCCATTATGACTAAAAATTGTTGAAATGACCTTTGGACC--ATTTTTTATCTGGCAAATTCCCAGGGGGCAGCTTGACTGAAGGAATGATGGGAGAACGAGCTGAGCTAGACTCATGATAAATAAGAACAATTATCACACTTATTATCTGATAAATAATGCATCAAGATTTGCCATTAATCCATCACAAAACACCTACTTCAGGAAAA---AGCCCGCAGCCTGACTTCCTTTTGTGCATCCCTGCTTAGTGTCAGGTGTTTGTGCTAAAGGAACATAAAAGGAGTGTTTACTTGGAAGCTGAGAGCC-GCCTCTGCATCTTTGATCATTCCAATCAG-GGAGGATGAAATATGGTCCTCACAGAAGCAACAAATTGATTCTTCTGACTCA .::..::.x.::..x..x..--:...:....x..x..:.....x::..:..:.-.x:.x.x..........::............x.:.:x.xx......:............:.:.......:............x............:..:..:....x.:.:--..x.....x.::......-.::x....:x:.:....:....:.x....::.......:..x::..:..x...x.............................................x:..::x..........x........x...:x.....x..xx.x.....---.x...:x..x........--..::xx:x.:..:::x.x:......:x:..:x...:x:.::....:...:.:..::-..:.:.....xx.:.::...-.:.x..:...x:.........::......-x.x:...:..x..:.x:...:.:.x..::.::....:::.x.....xx.... 20M2D31M1D111M2D18M1I148M3D18M2I56M1I20M1D29M1D52M 358/503 71.2% 507/94230402 0.0% 14/503 2.8% 108538927 81675628 +3781 chr4 + 190214555 138829845 138829844 138829927 83 CGTGGTGGTGCACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:.--...:.:...........::........x.x..x...x::........::....x:xx:..:..:.. 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 62796648 NA +3169 chr4 + 190214555 138832931 138832930 138833009 79 GGGAGGAAGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAGTAAAA chr4 + 94230402 27325483 27325482 27325561 27325483 27325482 27325561 79 GAGAGGAAATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAA .:......:..:..x.xxx...:.::::x..x::x.:x:.:...........:..........::..:.....xx.... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 111507448 78707107 +16373 chr4 + 190214555 138844110 138844109 138844524 415 ACAATTACTGAGTGAGAAGTGCATAATTAATGAACAGTCACCGTATATGTTTGGGAAACTGTGACCCAATCACTGAACAGATAACTGAACCACTAAAATAAATGACTTGTCCCACTCATTACCTGATCAGCATTTGTTTAGAAGTTCCTTGGTGCCCTATCAAAATTCTAATCAGTTCTATTTAAATTACATTTTTTTGCACTGCATTGTTATAAATGCTAATTTATGCCTAGAATGGAACAGCTTTATTTCTTACCTCCTGAAGAAACGGATGAATAAAAACATACTTCTACAGGGCATAAAAGATTATCAAGGGTTCAATGACTATTGGGTTTTGCACTCACCAAAACACATCCTGAGACTTCGAGCTGAAGCTTTAGGGGACAATAAGGACATTCAAACCTCA---CATAGCAAA chr4 + 94230402 30292702 30292701 30293111 30292702 30292701 30293111 410 aCAGTTACTTTGTGAGAGGGGAATAATTAAG----AGTTGCCATGTATGTCTGGAAATCTGCAATCCAAAGAGAGAACAGGTGACTCAGCCACTCCAGTAAGAGACCTGCCCCAGTCAATACCAGCTCAGTCATTGTCTGGAGGCTCCCAGGCACCCTGTCAACATCCCAGTGAGTGCCACTTAAGCAACATCTTCA-GTGGCGCATTGTTACAAACCCTCATTTATGCTTAGAAAGCAATAGCCTCATTTCCTGCCACATGGAGAAGCAGATAAATGGAAGGATACCTCTGTAGAGCA---GAGATTATCGGGGGTTTGGTGACTGCTTGATTTTGCATGTGCCAAAGCACATCCTGAGACTCTGCAAGGATGCTTTTGCAGAAATCCAAGACTTTCAGATCTTAATGCACAGCAGA ...:.....xx......:.x.x........x----...::..:.:.....:...:..x...::.:....xx.xx......:.:...x.:.....xx.:...:x...:..:....x...x....x.x....:xx....:.:..:.:...:x..::....:....x..:.:.:.x...x.:.:....::x....:..:x-.::x:.........:...:x..x........:.....x.x..:...:.:.....:.:..x.x..:....:.:...:...::..:x....:...::..:...---:........::.....:::.....::.x.:.......:x::.....:..............::.x:xx..x.....x.x:..x.x:x.:...x....:.:..:.---..:....:. 31M4D162M1D101M3D104M3I9M 279/407 68.6% 410/94230402 0.0% 11/407 2.7% 108551408 81663147 +18840 chr4 + 190214555 138851516 138851515 138852031 516 AAGGAA----ACTTCACATTGAGAATGGATATGGTTTTCAGCCAGCACCAAATGTCTCTCCTTCTGCCTTTTTGTCTTTCCGATCAATCAGAACATGTGAAACTCCCAAATGAAGAGTAAACACACAGCCCAGGTTCCTTTCATCTCCTAACATATGTCATGAAGGGGGAGGGAAAAAAGTCTATTCCCAGCTTCAATCAGCCCTTCGTATTCTGTGACTTGAGCCTGAAACTGAAAGGGATGTTGCGGG---GCGCTGTGGAGGAGTGCTGAATGTGGGCTGACTCCTTGGAAGATAATAGGTATTCGCTGCATACCTGAGTCTTGGAGTCATTATCTCCCCTGTGAGCACTTCTGTATTTATATATAATGAGATCATTACCAGGCAGCTATTTCAATTTTATTCAGACTTTAATATTTCTTGAAGAAAAAAATAGCGTACAAAA-GGGTTTGTGATGCCAACTCAATCAGTCGTGCTGTTGATGGAGAATTATTCAAGTGCAAGCCAGAACAGGCAAAAAAA chr4 + 94230402 30297148 30297147 30297643 30297148 30297147 30297643 496 AAGGAAGCTGACTTCATACTGTGAACTGATATGGTTTTTGTCCTTTACCATCTCCCTCTCTTGCTTTTTTTTTGTCTTTTCAGCCCATCAGAATTCTTTAAAATTCCATGTGAAAAGTAAATAGCCAGCCCCAGCTCATTTCACCCCTCAACACGAGCTGT-------------AAATAACGTACTCCCAGT----------CACTCATATTCTGTGACTTGAACTTTATGCTGAAGGGGGTTATGTGTGTTAGCACTGGAAACATATCTCTAAGGCAGGCTG--TGCTTCGTAGTTAATAGTTATGTGCTGCATACCTGAGCTGAGGAATCATTATACCCCCCGTGAGCAATTCCAAATTTATACGTAATGATCTCATTACTAGTCAGCTATTCCAATTTTATCTTGACTTCAATATTTCTCGAAGCAAAA---AGCATACAAAAGGGGTTCAAAATGCCAACTCAATCAAACTCCGTATTGATGGACAATTACTCCGCTGCAGGTCAGTATAAATAGAAAAA ......----......:.:..x...:x...........::x..xx:....xx.x:.....:.x..x::...........:.:::.x.......:x:x.x...x.:...x:....:......:.xx......x:.:..x.....:.:.::....::x.:::.-------------...x.::x..:......:----------.x:..:...............:.:.x.x:.....:...:.xx..:.x.---..:...x::.x:x:.x::x..x.::.....--.x...x.x..x......x...x:..............::xx...:.......x:....:.......x...::x.......::......xx.......:..x........:.........::x.....:.........:....x....---...:.......-.....::x:...............:x.x:xx.:........x.....:..x:x....:.:...x.:.:::.:..... 6M4I151M13D18M10D48M3I30M2D147M3D11M1I77M 344/488 70.5% 496/94230402 0.0% 36/488 7.4% 108554368 81660187 +3446 chr4 + 190214555 138853258 138853257 138853333 76 TGAGGGAAGGAGAAAGGAAAGAGGGAAAGAGAAAAGGAAGAAAGGAAGGGCAGGCAAGTGGGTGGGAGGAGGAGAG chr4 + 94230402 73744716 73744715 73744785 73744716 73744715 73744785 70 TAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGG------GGTGGGGCAGGGGTGGAAAG .:.:....::.......:..::...............:::.....::...------:.....xx:.:..x...:.. 50M6D20M 51/70 72.9% 70/94230402 0.0% 6/70 8.6% 65108542 NA +26622 chr4 + 190214555 138862920 138862919 138863465 546 TATTCTTAACTTAAGCAGAAAGAGTGCATTTCCTCATTATGTCCTCATAGCTGGGAGGCACATGAAATGGAGAGTGGGCTGGG-GATTCTGTGCTTTGTTAAAGTGAAGGGACAATCAGCATCAGGAACATTAGCCATGGCAGTACACAGGATTGCACAGCGACGTATGAAAAGAAAAATCAGTCATCAGAATTGAATTTTTAGCTGGAGCCTAAGAGGCCAGATTTAATCATCCCCCTAAAATTATCACACAAGTCAATAATTCCTCCCTTCTCCTTGCAAAGGAAAAGAAATGGATTCTTTATTTTTCAGTCAAGCAGGTGGCCTTGAGGCAGCTAACCGGCTGGCTGAAATCTAAATACCTTCGCCAAGACAAAAGTCAGTAACATGATTGATTATCTTCTCATTGGAGGAGAAG-AGAACCTCC-CCCAGCCAATCAGCATACAGAACTGCTATCAGATTATCAGTG---AACCAAACTAGGCTTAGAGCTGATAAACGAAGGTGCCCAAATCCCAGGCGCCAATTGGCTGGGGCTTCATCTACCAGC chr4 + 94230402 30301939 30301938 30302479 30301939 30301938 30302479 541 TGTCCTTAACATAAACCGAAAGCA---GTCTTCTCATTATGTTTTGATAGCCCAAAGCCACAGGAAATAGAGAGCAGGCTGGGCTTTTCTGTGCTTTGTTAGAGTGAAAGGACAATCAACATCAGGAACATTAGTGGTGGCAGAATACGAGATTGCTCAGCAGTGTATGAACAGAAAACT-AGTCATCTGAATTGGATTTTCAACCGGGGCCTAGGAGGCCAAATTTAATCATCCACCTAAAATTATCACACAAGTCAATA-TTCCCCGCTTCCCTTTGCGAGGGAAA-GAAACTGATTCTCTGTTTTTCAGTCAGGCAGGTGGCCTTGAGGCAGCTAACCAGCTGGCTGATAGCTAAATACCTTTGCCAAGACACAAGCGAGTAGCATGATTGATTATCTTCCTATTGCACTGGAAGCAGACCCTCCTCCTCGCTGGTCAGGCTCCTGAGCTCCCGCT---CTGCTAGTGTGCAGCACAACTCTTCCAAGAGCTGACAG--TAGTGCTCCCAAATGCCAGTCTCTACCTGGCCTCTGCTTTAGTTACCAGC .:.:......x...:.x.....x:---:.:.:..........::.x.....:x::..x....x.....:.....::.......-xx...............:......:.........:...............:x:......x.:..::......x....:::.......x......x.-.......x......:.....:.:.:..:.....:.......:............x.........................-....:.x....:.:....:.:.....-....:x......:.:...........:.........................:.........x.x...........:.........x...:x....:.................::....x.xx:....-...x.....-..:x..:::....xx.x.x..:..x.::::---:.:::....---.:.xx....xxx.:x........:.:--x.:x.:x.......x....x.x.:.x:....:xxx....:.x:....... 24M3D56M1I96M1D80M1D26M1D129M1I9M1I30M3D9M3I26M2D50M 413/535 77.2% 541/94230402 0.0% 17/535 3.2% 108560981 81653574 +3026 chr4 + 190214555 138869621 138869620 138869665 45 TTTTTATCCTTTTTTTTTTTTTTTTTTTTTTTGAAATTGTAAGGT chr4 + 94230402 13060140 13060139 13060184 13060140 13060139 13060184 45 TTGTTGTCCTCTTTTTTTTTTTTCTTTTTTTGCAAACTGTAAGGT ..x..:....:............:.......xx...:........ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 125809481 64405074 +10386 chr4 + 190214555 138870616 138870615 138871169 554 AAATGGATTTCTGTCCCACTGAC-----ATTTTATTCACTCAACATTTTGCTCCGTATTTAATAGGTAGATACATTTTAAGTGAAAGAAATTAGTCTCTGTTTTCCCCTTAACTTCTCTTCGAAAATGAATGAGATTTTTTGTAAACCTGTCTCTCTAATCTGCAGATTCTGTTTCAGTGGATCAATGAGAAAACATTTT-GACAAGTCAAATGTTCATTTTTTAGGGGAAAAATAGCCCTCTCTATCTAGGCTGCCAAGACTGTGGCTTATGTGTTCTTAGGCCCTCAAGCTATCAATC-TGCATTTCACTGCAGGCATTGCCCAGATGTCTTGGTCAGTGCACATTAAAGGCTTAGTTGCTGGCT--TCTTAGGAAAGAGATTTAAC-------------------ATTAGCACATGTTCGATGT-----------------------------------------------------------------AAAGGAACATCCTTCTCCATTGAAAGAGAAATTTTATTTCTCTGGGAGAAAAAATTACAACGTGTAGTCACTAGGATGCATTATGAACCTGTTATTGCGTGTGGGATTTATGATCAAGGTCTCTTCTCTTCCGCAAGGATTCTTCAGCTAAGGGC chr4 + 94230402 30308151 30308150 30308782 30308151 30308150 30308782 632 AAAATGATTTCTGTTCCTCTTCCCACCTGTTTTTTATATCCAAATTCTTACCCGACAGC-AACGGATGATGACAAAACAAGGCAAAATGAT--GTTTCACTTTCCTCCTTAACTATTCTGCCATAATGAAGCAAATCTCTGCAAAATCCCTTTCTGTG-CCTGGCCACTCCATCCCAGTGGCTCAGCACAAGCACATTTTTGACAAGGGTAATGTTC-CTTTTTAGGCAAGAAATAATGCTCTCTGTCCAGCCTGCCGAGACTGCACCTTACAGATTGGCACCCCCGTGTGCTACCAGCCCTGCACTTCCCTGCAAACATCACACAGGTGTCTCGGTCAGCTCACATTAAAGGCTTAGGACACGCATTATCTTGGAAAGGAGATTAAACGGTGGGAATATGCTACGTGATTAAAACAAACCCgaggggggaggggggggggaggaggggatgagagggtagggggaagaaaagaaataaggaaaagaaaataaaagaaagggCCGTCTCTATTGCAAACAACAGCGGATCT-------GGGGAGCGGTACGACACGCACTCTGCAGGACGCACGAAGAACCCCTTGTTGCATGCTGGATTTATGAGCAGGGTC---CCTCTTCTACGAGGCTCTCCGAGCTACGAGC ...xx.........:..x..xx.-----:....x.x:.::...xx.:..:.:.x::.x:-..::.:.::xx...xxx:...xx...:x:..--..:..xx...:.:........x:...x.x.x......xx.:..:.:.xxx...:.:x.:...x.:-:...xxx.:..::.::......x...:::x:.:x.......-......xxx.......-:........x:.:.....::x......:..:..x.....:......::x....::x:..xx:.xx...x::x....:..::.-....:...x.....::...::.x...:.....:......:x................xxxx:.xx.--....:.:..:......x...-------------------....:x...x:::...x.x-----------------------------------------------------------------....:..x:x..x....:....x..:x:.x.x:xx..:.-------:.::.:x:x...:..::.:.x..xx:....:...:x.x.....:x..:....:..:x..........x..:....---:......::.:...x.::::x.....x.:.. 23M5I31M1D31M2D65M1D41M1I16M1D82M1I66M2I20M19I19M65I39M7D75M3D31M 342/539 63.5% 632/94230402 0.0% 108/539 20.0% 108562465 81652090 +3055 chr4 + 190214555 138875533 138875532 138875587 55 AAAAAAGAAAAAAGAAAAAGAAAAAAAGAAAGAATGGTCTGGGAAGGGGAAGGGG chr4 + 94230402 64055848 64055847 64055902 64055848 64055847 64055902 55 AGAGAATCACAGAGAAAAAAAAAAAAAAAAAGAATAATCTGTGAAGAGGAAGAAG .:.:..xx.x.:.......:.......:.......::....x....:.....::. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 74819685 NA +13268 chr4 + 190214555 138889536 138889535 138889863 328 CTTGACTAGAGGTTTAACTTC------CTCACTCTTCTTTCCAAGCACACAGTATTTGAAAAAAAGGACAGCAGAGCCTGCAAATCCTCTCATCAAAGAGGCATTGACT-TTTAATTTTACAAATGTGGCTCTTTCCCATAAGGAATAGAGAGAATTCATTAGTAATCATACTCCAGAGACTTATTCCTTCTGCATGTTTCTTTCTTCTGGCTATCATATAATTACACCCCAGATCTCTGATTACAGAAACTTTTCCCCTTAACTGCTATATAATTTTAGAATCTCTCTT--TTTCTATTCCCTTCTTTTCCAGTAGGTCTTTAAAAAGAGAGGAAA chr4 + 94230402 30312953 30312952 30313272 30312953 30312952 30313272 320 CTCTACTTGAAGCTGAGCCTTGCTGCTCCCGCTCTTCTTTCAAAGCTTGGTGTATTTTGATAAA-GGACATCAGTGCCTGTGAATCCTTTCATCAGAGAAGCATTGACTATTTAATTTTACAGTTGTGGCTCTTTTCCACAAGGGATACAGAGAATTCATTAGTAATCACACATCAGAGAGTGCATCCACCTACATGTTCCTCTCCTTTGGCAATTGTATAATTACACAATCG-TTTCTTATCAAAGAAATTTTTCCCTTTAACTTCTACACAAT-----AATTGCCCATGGCTTTGCTTCCCTTTATCTCC----------CACAAAGAGAGGGAA ..:x...x..:.:.x.:.:.:------.:.:..........x....x::xx......x:.x...-.....x...x.....::......:......:...:.........-............:x...........:...:....:...x....................:..x:......x.xxx...x:..:......:..:..:.:....x..::...........xx:x.-.:...x..:.x.....:.......:......x...:.:...-----...:x.:.x.--:..:xx.......:x.:...----------:.x.........:.. 21M6I37M1D44M1I123M1D41M5D10M2I20M10D15M 234/311 75.2% 320/94230402 0.0% 26/311 8.4% 108576583 81637972 +3209 chr4 + 190214555 138890417 138890416 138890475 59 ACCTGGGCAACAGAGTGAGACTCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 44082650 44082649 44082708 44082650 44082649 44082708 59 ACCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAA ...x.x...:x..:...:.x:..:...........x...x...x....x.......... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 94807767 NA +38490 chr4 + 190214555 138890873 138890872 138891860 988 GAACATCTGAGCAGTTGCAGTCTCTCTCCTATGCACACACACTTATCATTTCTTATTTTCAAAAAGAAAATTTCTCCTTAGCTTTTTGTTATTAGTCTCCA-GTGATGAACAATAGGTGGGAAATTCTGAGAAAATAAACTGCTGAAATTATTATTCACTCCTTGCTCCAGATTGCTCTGCGAGCTACGGATTGCACGTTCTGCATTCGGTGACTAAGGCCTCGTCCCATGTGTTTTCCCAGTTCAATCAACTGTGCTAAGAACTGTCACAATAGCCCTTGACGACAAGAAAATAAAATTTAGGGTAGAATGGAGAGCCTGACTTGCATTGTAAT----TCTGGTCTGCACCTGTTTT---------------------------TTTCCCCCTGGTTGACAATGTTTGCGAACCTTTTCATCCACCTTAATGACAAAAGAAAAGGAATGGGTTATTTTTCCAGTTTGGATAATTGCTTCTGAAACGTTGTCACAATCTTCCAAATGACAATATTTCCTTCATGTCAGACGACTGTGA--------------TTTCCGGGCAGCACGGGTTGCGGTTTTGTTAGGGTTCTGGTCTGCTGCGAGCCTTGGGAGTTTTGTTTTGTTTTTTGTTTTAGGTTTTTTTCTCTTTTTTTAAGAAAAAGACAAAGCAAAACCAAGTAAGTCACAATGATAACTTATGACAGAAAAA----TCAACATCTGAATCGAATGATAATAGCAGGAGCCTGCAGTCAGGAGAGGAAGTGTC--TTGTGCCAAGAAAAAAAAAAGGCACAGAAAGTTATTTAAAACTGATA-AAACCCACCAGGAGTCACAATCCCATCATGGTTTCCCTTTGGAAAAGAAGTTTTCAGAAGCCCCAATTAACCTTAATTGAATTCTGCCTTAGTAATATCTGGAATTTTAATTGACTGGGAAGGTGATCATAAATCTATGTTCATAATGCGGCTTAGCCATTAGTAAATCCCCGGATGGCACACAGCCTTG--TCATGCGAGGGACTTAGCTATTCTGTGGGTGA chr4 + 94230402 30313438 30313437 30314393 30313438 30313437 30314393 956 GGACCTGCAAGCTGCTGCAG-CTCTCTCTT-TCTACAC-TGCTGCTTCCCTCTCCTTT----------AATTCCTCACTGGCGTTTGGTTATTAGTCCCCACGCAGTAAACAACGGGTTGCAAATTCTGACAAAAGGAATGGCTGAAATGATTATTCA-TCCCTCCAAGAGATTGCTCTGCGAGCTGAGAGCTGCACGTTCTGCATTCTGTGACTAAGATACAGTCCCATGTGTTTTCCCGGTTCAATCAAGTGTGCGAGGAACTGTCACAACAGTCCCCGATGCCAAGAAAATAAAATTTAGGGTAGAACGGTAAACCTGAGCTGCATTTTAATGGAATTTCATTTGCACCTGTTTTCCCAACCCTTTGTTTATTTTATTCTTTTTTAATCTTTACTGACAATTCATTAAAGCATTAGCATCCCTCTCAACAGCGAAAGAAAAGGGAGTTGTTATTGTACCTGTCTGGATAATTGTTGCTGAAGTGTTGTCAGATTCTTAGAAGTGGCTATATATCTTTCATGGCAGGCCACTGGGACTGATACAAAAACATTTCCAGGC------------------------------GTCTG------------------------------------TAGATTTTTTTCCTGCCTTT--AGAAGAAGACGTATAAAGAACAAATAAGTCAAAATGATAAATTATGACAGAAAAAAAAATCAACATTTGAATTGCTTGATAATAGCGTGAGCGTA-GGGCTGGAGGGAAGATTACGGCAGCGTCAGGGAGGAACAGA---ACTGAAAGTTATTTAAAAGTAATAGAAACCCTCTAGGATCTGCAATCCCACCATTGTTTCCCGTTGGAAAAGCAGTTTTCAGAAGCTCCAATTAACCTTAATTGAATTCTGCCTTAGCAATATCTAGCATTTTAATTGACTGGGAAGGTGATCATAAATCTCTGTTCAAAATACAGCTTGGCCATTAGCAATTCCCAGAATGGCACAGCAACGTGCCTCAGAC-AAGGACTAGGCTCTTCTGCAGGtaa .:..x.x::...x.:.....-.......:.-.x:....-::..xx.:x::...:x...----------....:...x:.:..x...x..........:...-.:::.:.....::...x.x.........x....x:..:x........x........-...:.x.xxx.................:x.:::................x.........::x:x.................:..........x.....x.:............:..:..::..:.x.........................:..x:.:.....x:......x....----.:.x:.:............---------------------------...xx:.:.x::.......x:x.xx:.:.x..xx.....x:..:..:::.:..........:.xxx......x.x..x..:..........:.x.....::.......x.x....xx..:..:.x....x..:......x...:.x....x..--------------.....:...------------------------------.....------------------------------------...:........::x::...--....:.....:x.xx..:.x...:.......x........x..............----.......:.....:.xx..........:x....x.:-:.x.x....:.:.::.xx.--:x.:.:..:.:.::..x.:.---..x...............x.:...-......x.:....x:::........:...x.......x.........x.............:..............................:.......:.x.................................x......x...:.:....:........:..x....x.:........xx:x.x..--...x:.-.:.....x:...x.....::...:. 20M1D9M1D7M1D19M10D33M1I56M1D176M4I19M27I153M14I9M30D5M36D20M2D55M4I36M1D19M2I20M3D24M1I190M2I6M1D25M 690/901 76.6% 956/94230402 0.0% 142/901 15.8% 108577435 81637120 +3553 chr4 + 190214555 138900862 138900861 138900934 73 TACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x......:.........::::........x.xx.x...x.:......:..:.:..x.xx:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 62867657 NA +3351 chr4 + 190214555 138906487 138906486 138906598 112 ATACTGTATAGTAT--ATACTGTATGTATATAGTAT-----------ATGTATATATATATACATACATATATATACATATAGTATATGAGTATATATATATATATATATATACACACACACACA chr4 + 94230402 60515090 60515089 60515214 60515090 60515089 60515214 125 ACATTGTACATTATTAATATTTTATTCATGTATTCTCTTTGATTCTTATATATGTGCATGTACATACATATTCATATCCACACTACCCAAGTATTCATGTATATAAATACATACAACCAAATGCA .:.:....:.x...--...:.x...x:..:..x.x.-----------..:...:.::..:...........x:...:x:.:.x..:x::.....x:..:......x...:.....xx..x.::.. 14M2I20M11I78M 75/112 67.0% 125/94230402 0.0% 13/112 11.6% 78391397 NA +3139 chr4 + 190214555 138908251 138908250 138908323 73 AGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAGGAAGGAAGGAAGGAAAGAAAAGAAAGAAAGAAA chr4 + 94230402 75176447 75176446 75176519 75176447 75176446 75176519 73 AGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ...:.:...:....:......x..::.xx:.:.:.........x....:..xx..x..::::x...:...:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 63731804 NA +18904 chr4 + 190214555 138918385 138918384 138918818 434 TGTGTGGTACTCAGCTCCAAG-GCCTTGTAACAGAGATGATGTATCCCCATCGAAGAAAAATGACAGTCAGAATAAGAAGACGAAGCCAGTTTGTCACTTAATGCAAAGGCTGATTGTGCGGCAACAACAGCCTCACACTGGGATTGATTACAAACAAGATGACACTTCCCTGTGGGCTGCCTCGCGTGTTATTATAAATAAATA-CCATTCGTTTTAGAATCTGCATTACTGCAGAGGATAGATTATACCTCAGCGCCCTAGGTATACAGTAAATATCCCAGGGAGTACAATGGCCCTTCTCAACCCACAATAGGAGCCTCGCCTCATGTGACACAGTATCATAAATAAAATCAGGCCGTAGCACAGAGCCATGAGAACAGAAGTGAAGACAGAGT-TTGACTGATGTTAGGGATTCATCTCCATGAAGGGCATGC chr4 + 94230402 30316998 30316997 30317425 30316998 30316997 30317425 428 TATTTGATGCTCAGCGACAAGAGTTGCATAATGGAAGCAATGCATCTTCGGTGGAGAAAAATGACAGCCGCAATAAGGCAACTAAACCAATTCATCACTTAATGCAAAGCATTATTGTGCTGCAGCCGGAGCAGCGCACCGGGATTGATTACAAACAGGATGACACCTCCCTGTGGACTGTCTGCTGTGTTATTATAAATAAATACCCATTCATTTTGGAGTCTGTATTACTGCAGAGGATAGATTATAGCTC--------GAGTACACAGTAAATATCCCGTTGAGTACAATGTCCCTTCCTCTCCAACAA-ATGAGTTTCGTCTCACATAATACAGTTTCGTGAACAAGATAAGGGAACAGAGAAACGCCAGGAGACAGAGAGATCTGCCAAAATCTCGATGGGTATTAAGGAGCCACCGCCATGAAGGACGCAC .:.x..:.:......xx....-.::x::...::..::::...:...::.:x:.:.............:.:x......:x:..x..:...:..::...............xx.x.......x...:.x:x...xx.:...:.................:........:.........:...:..xx:...................-......:....:..:....:.......................x...--------::...:..............:xx..........x......::xx..x....-.x...::...:....::.:.:.....x..:.:..:..:..x...xx::..x:x.:x....x....xx:::..xxxx.x..:.:.-.:..:x.:.:...:...x:..:.x.........:.:::. 21M1I183M1I47M8D51M1D84M1I39M 304/425 71.5% 428/94230402 0.0% 12/425 2.8% 108601387 81613168 +3013 chr4 + 190214555 138921941 138921940 138922003 63 CTGTCTCAAAAAAAAAAAAAAAAAAAAAATAGAAAGAAAGAAAAGTTTATGATTTTTTTTTAC chr4 + 94230402 69834631 69834630 69834693 69834631 69834630 69834693 63 CTGTTTCTTAAAAAAACAAACAAACAAAACAAAAAAAAAAAACGGTTCAGAATTTTATTTTGC ....:..xx.......x...x...x....:.:...:...:..x:...:.x:.....x....:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 69087310 NA +3241 chr4 + 190214555 138924604 138924603 138924662 59 CCCTGTCTCAAAAAAAAAAAAAAAAAGAAAAAAGAAGGAGGTGGGGGAGGAAGAGGAGT chr4 + 94230402 76607305 76607304 76607363 76607305 76607304 76607363 59 CTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAAGT .:...:........x....x.:....:........:.....x...xx::...::.:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 62317299 NA +3434 chr4 + 190214555 138934005 138934004 138934074 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:...........::........x.xx.x...x::..x........:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 62900808 NA +3095 chr4 + 190214555 138953335 138953334 138953392 58 CCAGGGTGACAGAGCGAGACTCTGTCTCAAAAAACAAACAAAC-AAACAAAAAAAAAAC chr4 + 94230402 44082651 44082650 44082709 44082651 44082650 44082709 59 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAAC ....x.:::x..:.:.:.x:......xx...............-............... 43M1I15M 46/58 79.3% 59/94230402 0.0% 1/58 1.7% 94870684 NA +3027 chr4 + 190214555 138953354 138953353 138953402 49 CTCTGTCTCAAAAAACAAACAAACAAACAAAAAAAAAACAAAAAGCTGT chr4 + 94230402 77919154 77919153 77919202 77919154 77919153 77919202 49 CTCTACAGCAAAAAACAAACAAACAAACAAAAAAAACCCAACAAATTGT ....::xx............................xx...x..::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 61034200 NA +3026 chr4 + 190214555 138966075 138966074 138966108 34 AAAAACAAACAAACGAAACAAAACAAACAAAAAA chr4 + 94230402 11407783 11407782 11407816 11407783 11407782 11407816 34 AAAAACAAACAAACAAAACAAAACAAACAAAAAA ..............:................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 127558292 62656263 +3726 chr4 + 190214555 138969304 138969303 138969386 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCACTCGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::........x.xx.x...x....:........:..x:xx:..:..:.. 9M2D72M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 62936107 NA +3204 chr4 + 190214555 138975905 138975904 138976004 100 CATGGTCCTCACCTTTAGCTCAGAATAAATCTCTTCAAATATTTTACAGAATTTGGCTTCTTTTTTTTTTTTTTTTTTTTTTTTGGCCAACAATTTATTC chr4 + 94230402 38023781 38023780 38023880 38023781 38023780 38023880 100 CATGATACACTACTCTAGGAAAAAGTGTCTCTCTTTAAAAATATTATGGAAATGAAACTCTTTTTTTTTTTTTTTTTTTGGTGGAGTTAACCATCAATTC ....:.x.x.xx..:...xxx.:.:.:xx......:...x..x...::...x.x::x:.....................xx.xx:.::...x..:x.... 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% 100952124 89262431 +3549 chr4 + 190214555 138983657 138983656 138983728 72 GCACCTGTTGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...x..:.........x.::........x.xx.x...x.:..............x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 62950451 NA +3003 chr4 + 190214555 138997965 138997964 138998022 58 TACGCCCAGCTAATTATTGTTTTTTGTTTTTTGTTTTTTTTTTTGTAGAAATGGGGTT chr4 + 94230402 36231 36230 36288 36231 36230 36288 58 TACCCCTATAGAATTACTGTTTTTTGTGTTTGGTTTTTTTTTTTGGGGGGGGGGGGTT ...x..:.xxx.....:..........x...x.............x:.:::x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 138961734 51252821 +3410 chr4 + 190214555 139001444 139001443 139001526 83 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGAAGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--....:.:.........:x.:........x.xx.x...x.:.........:.:..xxxx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 62968247 NA +3017 chr4 + 190214555 139002208 139002207 139002249 42 TGATGCATTTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTT chr4 + 94230402 53858848 53858847 53858889 53858848 53858847 53858889 42 TGAGGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTTT ...x.::.x..................x.............. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 85143360 NA +3171 chr4 + 190214555 139006388 139006387 139006445 58 CCTGGGCGACAGAGCAAGACTCTGTCAGAAAAAAAAAACAAAAAAAACAAAAAAAAAA chr4 + 94230402 44082651 44082650 44082708 44082651 44082650 44082708 58 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAA ..x.x..::x..:.:::.x:.......:......x.......x............... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 94923737 NA +3000 chr4 + 190214555 139006531 139006530 139006602 72 CACTGCACTCCAGCCTGGTAACAGAGCAAGACCACGTCTCAAAAAAAAAAAAAAAAAAAAGGTAAGTATATA chr4 + 94230402 29563189 29563188 29563260 29563189 29563188 29563260 72 CAATGTACTCTTGTTTTGTTAGTTAGCAAGACAACTCCTGAATAAAAAACAAAAATAAAAAGTAAGTATTTA ..x..:....:x.::.x..x.xxx........x..x:..x..x......x.....x....:........x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 109443342 80771213 +3554 chr4 + 190214555 139032934 139032933 139033025 92 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGACCCTGGGGGGCGGAGGCTGCAGTGAGCCAACATCGCGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:...........::........x.xx.x...x::.....x..::.::.x:xx:.....:..------.....x::.... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 62999730 NA +14664 chr4 + 190214555 139043060 139043059 139043346 287 TTCCTTTTCCGTAGTGTGTTCCATGGGAACCGGTACAAGCAGACTCTATAGTGCTCTCGCCAAGACACTGAACAGCAGCGCTGCCTCCCAGCACCCAGAGTATTTGGTGTCACCTGACCCAGAGCATCTGGAGCCCATTGATCCTAAAGAGCTTCTTGAGGAATGCAGGGCCGTCCTGCACACCCGACCTCCCCGGTTCCAGAGGGATTTTGTGGATCTGAGGACAGATTGCCCTAGTACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTA chr4 + 94230402 30325184 30325183 30325470 30325184 30325183 30325470 287 TTTTCCCTCTGCAGCTTGTTCCATGGGAAACAGCACCAGCCGGCTCTACAGCGCGCTCGCCAAGACGCTGAGCAGCAGTGCCGTGTCCCAGCACCAGGACTGCCTGGAGCAGCCCAACTCGGCGCAGCTGGAGCCCATAGACCCCAAGGACCTACTGGAGGAATGCCAGCTCGTTCTGCAGAAACGGCCACCTCGCTTCCAGAGGAGCTTCGTGGACCTGAAGAAAAACACAGCCAGTAACCACCGCCCCATCCGGGTCATGCAGTGGAACATCCTCGCCCAAGGTA ..:::::..:.:..:x.............x.:.:..x...x.:.....:..:..x...........:....:......:..:.:x..........x:..x.:::...x.:x:..::..:.:.x...x...........x..:..:..:..x..x..x.........x:.x:...:.....x.xx..:..x..:..x.........:::..:.....:....:..x.:.:xxxx.:....x.....xx..:...x....:.....:...................... 287M 207/287 72.1% 287/94230402 0.0% 0/287 0.0% 108717876 81496679 +3617 chr4 + 190214555 139043779 139043778 139043857 79 GTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAAGTGGTGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.:.........:.::........x.xx.x...x.:.............:x.xxx..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 63010578 NA +52241 chr4 + 190214555 139044633 139044632 139045481 849 TTTCAGCTCTTGGAGAAGGCAAAGACAACTTTGTACAGTGCCCTGTTGAAGCACTCAAATGGGAAGAAAGGAAATGTCTCATCCTGGAAGAAATCCTGGCCTACCAGCCTGATATATTGTGCCTCCAAGAGGTGGACCACTATTTTGACACCTTCCAGCCACTCCTCAGTAGACTAGGCTATCAAGGCACGTTTTTCCCCAAACCCTGGTCACCTTGTCTAGATGTAGAACACAACAATGGACCAGATGGTTGTGCCTTATTTTTTCTTCAAAACCGATTCAAGCTAGTCAACAGTGCCAATATTAGGCTGACAGCCATGACATTGAAAACCAACCAGGTGGCCATTGCACAGACCCTGGAGTGCAAGGAGTCAGGCCGACAGTTCTGCATCGCTGTTACCCATCTAAAAGCACGCACTGGCTGGGAGCGGTTTCGATCAGCTCAAGGCTGTGACCTCCTTCAGAACCTGCAAAACATCACCCAAGGAGCCAAGATTCCCCTTATTGTGTGTGGGGACTTCAATGCAGAGCCAACAGAAGAGGTCTACAAACACTTTGCTTCCTCCAGCCTCAACCTGAACAGCGCCTACAAGCTGCTGAGTGCTGATGGGCAGTCAGAACCCCCATACACTACCTGGAAGATCCGGACCTCAGGGGAGTGCAGGCACACCCTGGATTACATCTGGTATTCTAAACATGCTCTAAATGTAAGGTCAGCTCTCGATCTGCTCACTGAAGAACAGATTGGACCCAACAGGTTACCTTCCTTCAATTATCCTTCAGACCACCTGTCTCTAGTGTGTGACTTCAGCTTTACTGAGGAATCTGATGGACTTTCATAAATACTTG chr4 + 94230402 30326162 30326161 30327010 30326162 30326161 30327010 849 TTTCAGCTCTCGGAGAAGGCAAAGACAACTTCGTTCAGTGCCCCATGGAAGCTCTGAAGTGGGAGGAAAGGAAGTGCCTCATCCTGGAGGAAATCCTTGCCTACAAGCCGGATATCTTGTGCCTGCAAGAAGTCGACCACTACTTTGACACCTTCGAGCCACTCCTCAGCCGACTGGGCTATCAATGTACTTTCTTCCCGAAGCCGTGGTCGCCGTGCCTGGATGTGGAGCAGAACAACGGGCCGGACGGCTGCGCCTTGTTTTTCCTCAAAGAACGCTTCGAGCTCATCAACAGTGCGAACATCCGGCTCACCGCCATGAAGCTGAAGACCAACCAAGTAGCCATAGCTCAGACACTGAAGTGCAGTGAAACTGGAAAACTGTTCTGCATCGCCGTCACCCACCTGAAAGCTCGTACTGGTTGGGAAAGGTTTCGGTCTGCGCAGGGCTGTGACCTTCTCCAGAACCTGAAGAGCATTACTCAGGGCGCAAAGATCCCTCTGATCATCTGCGGAGACTTCAATGCAGAGCCGACCGAGGAGGTCTACAGAGAATTCTCCAACTCCAGCCTCAACTTAAACAGCGCATACAAGCTGCTGAGCCCCGACGGGCAGTCAGAGCCCCCGTACACCACCTGGAAGATTCGGCCCTCGGGAGAGTGCCGGCATACACTGGATTATATCTGGTATTCCCAGCACGCCTTGAATGTGAACTCAGCCCTGGGCTTGCTGACTGAAGAGCAAATTGGGCCCAACAGGCTGCCCTCATTCAATTACCCTTCAGATCACCTGTCTTTGGTGTGTGACTTTAGTTTTAACCAAGACCCTGACAGACTGTTATAATTGGTTG ..........:....................:..x........::.x.....x..x..:.....:........:..:...........:........x......x....x.....x........x.....:..x........:............x.............:x....:.........x.:..x..:.....x..:..x.....:..x..:..:.....:..:..x.....:..:..:..:..:..:.....:.....:..:x..:.x..x...:....x:..........x..:..:x....x..x.......x::....:........:..:.....x..x.....x...:......:x..:x.x..xx:..x............:..:.....:..:.....x..:.....:.....:x.......:..x..x..:...........:..:.........x.:.:...:..:..:..x..x.....:..:..x..::.x..:..:.................:..x..:..........:.x.x..:x.:xx.............:.:........x..............:x.:..:...........:.....:.....:...........:...x....:..:......x....:..x........:...........:x.:..:..::.:.....:.:x.....:..x.:::....x........:..:.....:.........:.:..:..x........:........:.........:.:...........:..:....x:x.:..x:....::....x.:....x.:x... 849M 667/849 78.6% 849/94230402 0.0% 0/849 0.0% 108718471 81496084 +34434 chr4 + 190214555 139057851 139057850 139058400 550 AAAACAGA--AGATAAATTTCATTTCTATATTTCAG-AAAACCTACTTGAATACACTTTGAAACAAGAGTACAACAAAATAGAATATACTTCAAATGTTGAATATACAAACTATTATAGTTCAAAACTGAACACTGGTATTTCCCTCATAAACTTCAACTAAAAAAAAGAAAAAAAAACAAAGAAAACTCCAGGTATTAGAGCTACCTGCCAAAAATTCATGCTGAGCCTGAACTTCCAAGTGAC--AGCAGAACTGAAAATGGTATGTCTGCACAAATGCCAAGGCTAAGTGAGTGACACAGGCATGTTACAGCAAAAGGCCAGA-GCCAACTGTTAATTTGTCCACAATTAAGAAACT--GACAGACTTAAACTACCATATAAA--ATGTTACATGTATATTCTATAACAATACTGTGCTAGGTACAAGATTTTT-AAAATTTTTCTTTTAATAAAAAAGCTTTACACAAACAAGCCATTAGCTTATTTCAAGAAAGAAAATCGAAAATTAGTCTAAGGCCTTTGTTTTAAATCAGCTTAAGCTATATGATATATATAT chr4 + 94230402 30332868 30332867 30333407 30332868 30332867 30333407 540 AAAGCAGACGAAACAAATTTCATTTCTATATTTCAGTAAAACCTACTTGAATACACTTTGAAACAAGAGTACAACAAAATAGAATATACTTCAAATGTTGAATATACAAACTATTATAGTTC-ATTCTGAACACTGGTACTTCCCTC-TTAACTTCAACTAAAAAAAA---------------AAATTTACAGGT-TTAGAACTACCTGACAAAAGCTCATGCTGGGTGTGACCTTTCAAGTGACAGAGTAGAGCTGAAACTGAAATGTATGCACAGATGCCAAGGCTAAGTGAGAGACGCAGGCATGTTACAGCAAAAGGCCGGAGGCCTGCTGCTATTTTGTCCACAATTAAGAAATTTAGACAGACTTTACCTACCATACAAAATATGTTACATGTA-ATTCTATAACAATACTGTGCTAGGTACAAGatttttaaaaaaatttgttttaataaaaaaGCTTTAAACAAACAAGCCATTAGCTTATTTCAAGAAAAATAACTGAAAATCAGTCTAAGGCTTCCATTTTGAATCTGCTTAAGC--TATGATACAAAAAT ...:....--.:.:......................-.....................................................................................-.xx.............:.......-.x..................---------------...x:.x.....-.....:.......x.....::........:.:x...x...:........--..:...:......x..:x....x......:..................x...:.......................:..-...x:...:..x...................:.--.........x.x........:...--............-....................................-....xx...x...................x..............................:.x..::......:..........:.:::....:....x........--.......:.x.x.. 8M2I26M1I85M1D24M1D20M15D12M1D49M2I79M1I33M2I24M2I12M1D36M1I107M2D14M 474/529 89.6% 540/94230402 0.0% 32/529 6.0% 108724983 81489572 +69282 chr4 + 190214555 139058268 139058267 139060715 2448 CAAGATTTTT----AAAATTTTTCT-TTTAAT-AAAAAAGCTTT--ACACAAACAAGCC-ATTAGCTTATTTCAAGAAAGAAAATCGAAAATTAGTCTAAGGCCTTTGTTTTAAATCAGCTTAAGCTATATGATATATATATATGTATGTATATATATATATATATATATATAAAATCGCACTAGATCTTTTTTTGCTATCCTCTTTCTGAAGTTTTTGGGATCCATTCTTCAATTCACATTCTAAAATACCTATATTAGCAGAG-TCTTCACATAGCACCAGTTAAGTGAGAACTGTGCGAACACAGTAATAATTGCTGGTATGCATATAAAATGCATCAAAAATTGCTATATGTAACAATGAGATTACCCATCCCAACCCCTCCCACTGAAAACTATATA---------ACCTCTTACAGAAT-----GTTAGTGTTCCAAGTCTTAGTGTAACTTGATATCGTAGTGAGCTGCTTGGTCCCTTTCGATCCTTTTTCTTATTG-------ATGGGTTCAGTTGTTTCCT-ACTGTAAGAGGCAGTTTTCTGTCAGCATCTCAATATGTAGTTCATTTCCCACTGAAACATGGGATAGGTAATTTATTTCC--AGTAAGTCT----------GATTGTTTTTGTATATGCATTAAAAATGTTTTAAAGTCTTCTTTGACTTTTCTTGATGA---------CTTCCCTTGCAAATGTTTATGTCAGTACTGCCAC-----TAACAGCCTG-AAGTCCATGGTGGAG-----CTGCTATTTTATTTCTCACATGTCACTAGTCCTTCTGTTTTCATAGTTACAGGAAGGGCAATAGCTGAAGGCGCACTGACAACCACTACGTGGGTCACTGTCTTATTTCCATCTGCTGGTTTTTCTTC---TACTAGCTGCAAAGTTTTCACATCATGTTCTTGCTTTTTTGCCACTGCTTCCGATTTAACCTCTGGCCCCTTTATGACTGCACTGATAACTCGAGGAGGAGTCTGGCCAGATGCCTGCTGAGTAGGCATTGATAGTCTCATTACAGGTGTACCATGGGCTATTGAAACAGGGGTAAGTGCTCTCACAGCCAATGGGGTTCCAACAATGTTAATGCTTCCTGATCCAGTCAGATTTGACTTTGTCTGCAGTTGACACTGTGCAAGCTGTGTAGCTGGGATGGTAATAATTTTGGCAGGCTGCATGGTGATTTTGTCTCCATTTTCAGTAGAAGCTGGCATCACAGTAGGGATTGTCTGAATGACTACCTTTGGAGAGGTCGCTGTTGTTGGACTAGTGCTGGTTATTAATGGTGCACCTGCATTAACTGACTGAACTGCCACAGTTGAAATTTTCTGACCCAATGATGTCATTACAACAGGTACCTGCATTGCCACACGAACTGTCCTAGTACATTAGAAAGAAAAAAGCTGATTATATTTAATGCCAACTGAG---AAAATAGGTCTCCTGAGTAAAAGATTAATACAAATCCAAAATGTGTAAAATTAGTGCTCCCAAATTTTACAGAGGTACTGGCAATCCCTGATGTTTGACACAAACATACCATGATATATTTTAAAAACTAAAGCCTACATTAAGCTCCATCTATAAAACCATAAAAACCAATTCAGGTTATTTAAG--ACATCTACTTTTTTTTTTTTTTTGGAGATAAGGTCTCAGTCTGTCACCTAGGCTGGAGTATAGTGGTGCAATCTTAGCTCACT-ACA---ACCTCCAACTCCTAAGCTCAAGTGACTCTCCTGCCTTAGCTTCCTCAGTAGTTAGGACTACAGGTGTGTGCCACCATGCTCAGCAATTTTTTATTTTTATTTTATAGAGAGGAGGTCTCACTACGTTGCCAAAGCTTGTGTTGACCTCCTGTCCTCAAGCAATCCTCCTGTCTTGGACTCCCAAAGGGCTATGATTATAGGCGTGAACCACTGAACCCAGCAAGACATCTACTTTAACAACAATAAAAAATATAATTAAAACATCAAGCACTTTTCAAAGTCCTGACAACACTGGGTTCTTAGAACACTAATATTAAGCAAAAGGACATTTTGTTTTCACCACGGAGACTTTTTTAAAAAGTAAATACATTGTAACTAATGGTTTGCTTCACTTACCTTGGAGCTGCTGTTGCTGACACAGATGCAGTGGTAGTAGGAGACCTG---GATGAAGCATCGTGCCCAGGGGAAGTGATATTCACAACTCTAGCTACACCCTTCTCTGCTCTGGAGCAGTTTATAGGGGATGAATTTTTTCCACTGCGAACAGAGGATGCTGCTTTCAGGAGACTTTCTGCAGACAGTGACACTCGTTCTAATGATTTTTCATCAGTAGTTCCTGCTAAATCTTCATTACAGGTTTCACTTTTGTCATCATCTATGACCACTATGTTTTTCGGCATATCCTTGAACTGATATACAAGCCTCTGTCCTTCAACCTTTGCAAGAATTCCCCTTTGGTAGTAGTATCTGTAAGGGGAAAATGTACCAAATGAATCAAGTATATTATT chr4 + 94230402 30333625 30333624 30335707 30333625 30333624 30335707 2083 CAAGattttttaaaaaaatttttgtgtttaattaaaaaaGCTTTTAGCCAAACCAAGCCCATTAGCTTATTTCAAGAAAAATAACTGAAAATCAGTCTAAGGCTTCCATTTTGAATCTGCTTAAGCTAT--GATACA-----------------------------------AAAATCCCTCTAGGTCT-------CCGTCTTCTTTTAGAAGCTCTTCG-ATC--TCCTTTATTTCACATTCTACAATACCTAG--TAGCAGAGGTTTTCACTTAGCACCAGTTGAGT----ACTGCGGGCACACAGTAGTGATTGCTGGTATGCATATAAAATTCATCAACT-TTGCCATTTCTAGAAATGAGACTTTCC---------TCTCCC-CTGAAAACCAAAAACCAAGGCAAACCTCTCACACAATTCAATGTTAGTGTTCCAGGTCTTAGTGTGCTGTGACAGCGTAGTGAACTGTTTGGTCCCTTTTCAGTCTCTCTCTCGTTCCTTCTCCATAGGTTCAGCTGTCTCCTGACTGGAAGAGGCCATTT-CTGTCAGCATAGCAACGTG--GTTCCATTCCCACCGAAACACGGGA-AAATATTTCCTTTTCTCCCCAAGTCTCCAACATAACGCGTGTTTTT---------TTAACACT--TCCGAAGTCGCCTTT---TTGACGCGGTGATCGCCTCCACTTCCCTCCCCAAT--TTATGTCAGTTTAAGCAAAACAGTAACAGTCCGTAAGTCCACGCTGGAAGCAACCTGTT-CTTCACTTCTCACACGTAATGATTCCTTCTGTTTTCATTGTCACAGGAAGCGCGATAGCTGAGGGCGTACTGACTACTACCACGTGGGTTACAGTCTTGCTCCCATCTGCCATCTTCTCCTCCTGTAAGAGCTGCAGCGTTTTCACTTCACGTTCTTGCGTGACAGCCGCTGCGTCTGATTTAACTTCTGGGCTTTTTATTACTGCACTAATAACCCTGGGGGCAGTCTGGCCGGACGCCTGCTGCGCAGGCACCGATAGTCTCATCACCGGTGTCCCATGAGCTATAGACACCGGGGTTAGTGCTCTAACAGCCAACGGGGTTCCAACGATGTTGATACTTCCCGACCCAGTCAGGCCTGGTTTTGTTTGTACCTGGCACTGCGTCAACTGCGTGGCCGGGATCGTAATGATTTTGGCAGGCTGCATCGTGATTTTGTCTCCATTCTCGGTAGCGGTTGGCATCACGGTAGGGATTGTCTGGATTACTACCTTTGGAGTTGTCGCCGTTGTTGGACTCGTGTTGGTAATTAACGGCGACCCTGCATTTACTGACTGTACTGCCACAGTAGAAATTTTCTGTCCCAGAGAGGTCATTACAACAGGCACTTGCATTGCCACGCGTACAGTCCT---------GCAAAATAAAAACGTCGTGTATTTAA-ACCGTTAGAGCCAAAAATGGG--------------GAT--ACACAAATCTCAGATCTGCAG-------GTTTCTA--------------ACTGG-----------GTCTG------------------------TAAAAGCAACAACCTCCTG-----TCCATCT-------CGTAACAGGCGTTT---GTAGATTGAGCAGCATCCATCTCTCTCTTCTCT----ACATAA---------CTTTAAAATATGCTTGAGGGCA-------------AGCACACTGACAGGCAGCTCTGTCTCATAAACCACA------------------CTTTCACAGTATTC---------------TATCACATTACACGGCTGCCTGTAAAT---------CAGAGAAGA------------CTTCCAACACGTG------------------AAGTAAT--------------------AAAGAC----------AGCGT-----------CCCAACCAAAAATCTGCT-----------------TGTCATT--------------------------------CATTGGT------GAACAACAAGCCTAAG-----GCACATC-----------------------------AATACAAACCTGGGAGCTGACGAT----------------------------GCTGGGACAGTAGTAGTGGTTGTTGAGGGGCGAGATGATGATGTATCGTGTGCTGGTGAGGCAATATTCACCACTCTGGTGACTGCTTTTTCTGTTCTGGTACAGCTTAACTGAGACAAGTTTTTTCCTCCACGTGCAGAGGTTGCTGCCTTCAAGAGGTTTTCTGCAGATAAAGACACTCTCTCCAATGACTTTTCATCTGTAGGCATTGTCAAATCTTCACTGCAGGGTTCGCTTTTGTCATCATCGATGACGACTATATTTTTTGGCATCTCCTTAAACTGATAAACAAGCCTCTGCCCCTCAACTTTGGCAAGGATTCCTCTTTGATAGTAGTATCTGTAAGAGAAGTA-----CAATTATATC-AGTATATGATT ..........----.........x.-......-...........--:.xx..x......-...................:.x..::......:..........:.:::....:....x...........--....:.-----------------------------------......x.x....:...-------.::..:.....:x....:.:..x.-...--.:...:.x...........x........x--........-.:.....x...........:...----....:.x.x........:.:......................x......xx-....:..x.x..:x.......:.x:..---------:.....-........:.x.x.---------......:...x...-----............:..........:x:x...:.x........:...:...........:x.x:..:.:...::..x-------..:.......:...:....-....x.......x:...-..........xx...::..--....xx.......:......:....-.::..x..:x...:.--xx:......----------.xx.......---------....x.x.--.:::.....x:....---..xx.x:.:...---------.......:x.x...--..........x:x:x..x-----......:.:.-.......:.x....:-----...:.-:..:.:........:..x.:x.x...............x..:........x..:........:....:......x..:..:........:..x.....::.:........::x:..:..:..---..xx.......:x........x...:........x.xx:x...:....x..:........:.....x.::.....x........:.....:.x:..:.x.........:..:........x.:.....::...........:..x.....x.....:.....x..x..x.....x........x........:...........:.....:..:.....:..:........:::..::.....:..:.x:..:.....:.:x.:...:..:..:.....x.....:.................x.................:..:....x:.:.........:..............:..x.............xx.....:...........x...:....x.....:..:.xx........x........x...........x...........x....:x..x..............:..:...........:..x..x.....---------.x..:.x....:.xxxx.:.......-:..:x:x...---.....:..--------------...--.:.......:x.:..x..:.:-------.:.:.:.--------------.....-----------..:..------------------------.....:.x.x.:...x.xx-----.......-------.:...x.:x.:x..---..x:x..:..--:....:.::.:.:.:..:.:.----.x....---------..x.x.xx..x...x...x::.-------------...x....-...---.x...::x...x...:.:xx.------------------...:.x.....x.:---------------.::...xx.:.x.:..x:::.x.x.x.---------:.....:..------------:.x....x:.x..------------------...:...--------------------..:.:.----------:....-----------....:.x.:.x....:..-----------------.:.x...--------------------------------..:...x------.....x:..xx:....-----.x....:-----------------------------.:..x.x..x.x.x.:..:.:.:.----------------------------....:x....xx.:......x..x.::.:x.x:---.....x.:......:x.x..x..:.::........x.....:.:x..xx.:..:....:.....x:...:...xxx.:..::.:........x.::..x:......x......:....:...::..........:.:x.......x:..:.....:........x....x:x:..::.........:.:....x...:..............x.....x.....:.....:.....x.....:........x...........:..:.....:..x.....:.....:.....:................:.:.:x.-----...x.:x...-.......x... 10M4I11M1I6M1I11M2I13M1I69M2D6M35D17M7D24M1D3M2D29M2D8M1I23M4D51M1D27M9D6M1D14M9I14M5I75M7I19M1I17M1D19M2D25M1D15M2I9M10I10M9D8M2D15M3D12M9I14M2D18M5I10M1I15M5I5M1D122M3I507M9D26M1D10M3I8M14D3M2D21M7D7M14D5M11D5M24D19M5D7M7D14M3D10M2I21M4D6M9D22M13D8M1I3M3I21M18D14M15D27M9D9M12D13M18D7M20D6M10D5M11D18M17D7M32D7M6D16M5D7M29D24M28D33M3I317M5D10M1D11M 1534/2004 76.5% 2083/94230402 0.0% 523/2004 26.1% 108724643 81489912 +13884 chr4 + 190214555 139061853 139061852 139062063 211 TTGAGTTTTTACCTCAAAGCTCGTCCCATGGTTTCATAGTTCATGTCTGGTTTGTTCTTATGCTTTCCCCAAAGCTTAGAGACAGCCTTTGAATCCACCAGCTTGAATATGCCTTTTTCTCTCTGAGTCCATTTAATATACCTGGGACAAGTATTTTTATCTTGAAGTAGATCTAAAAGAAACTCCCACAAATAGGTTGTGTTTCCTTTAA chr4 + 94230402 30336075 30336074 30336285 30336075 30336074 30336285 211 TTAAGATTTTACCTCAGAGCTCTTCCCATAGTCTCATAGTTCATGTCAGGTTTGTTTTTGTGTTTTCCCCATAGTTTGGAGACAGCTTTCGAGTCCACAAGCTTAAAGATTCCCTTCTCTCGCTGAGTCCACTTAATATAACGAGGACAAGTATTTTTGTCCTGGAGAAGGTCCAGAAGAAACTCCCATAAGTACGTTGTATTTCCTATAA ..:..x..........:.....x......:..:..............x........:..:..:........x..:..:........:..:..:.....x.....:..x..x..:..:....x.........:........x.x:..............:..:..:..x..:..:.:............:..:..x.....:......x... 211M 172/211 81.5% 211/94230402 0.0% 0/211 0.0% 108725778 81488777 +5863 chr4 + 190214555 139067681 139067680 139067785 105 TACCTTTTCCTTCTCTTGGTTTCTTCTTTATACCTAACTCAGGAGACCCATTGGAAATTGGTGATTGCTGGGTCTTTGGTTTACGGCCAACTGAAAAAATAAGAT chr4 + 94230402 30341332 30341331 30341436 30341332 30341331 30341436 105 TACCTTTGCCTTCTCTAGGCTTCTTCTTTATACCAAGGTCTGGAGACCCATCTGAAATAGTCGACTGTTGGCTCTTGGGTTTACGGCCAGCTGCACACAAAACAT .......x........x..:..............x.:x..x..........:x.....x.x:..:..:...x....x............:...x.x.x.x..x.. 105M 83/105 79.0% 105/94230402 0.0% 0/105 0.0% 108726349 81488206 +11886 chr4 + 190214555 139071864 139071863 139072051 188 ACCTTTTTTCTTTTTCATTGGTTCATGGCTATCTGGTGATGTTGGAATAGGAGAGGTATCCATGGGTTCAGACTCTTCAGTTGACACCTCCACTACAGTTTCTGTAATGACATCTGGCCTCATAGCAGCATGGATGAATTCTGGAGTTGATACACAAGGAGGAACAAACACTTCCACTATAAAAAAAA chr4 + 94230402 30343057 30343056 30343244 30343057 30343056 30343244 188 ACCTTTTTTCTTCTTCATTCGTTCATGGATATCAGGGGATGTTCGAACAGGAGATAAATCCATTGGTTCAGATTCATCTGCTGGCACCTCTACCACAGTTTCTGCGATCACATCAGGCCTCATGGCTGCATGGATGAATTCTGGGGTTGACACGCAAGGAGGGACCAGAACTTCCACTAAGAGAGGAA ............:......x........x....x..x......x...:......x:x......x........:..x..x.:..:......:..:..........::..x.....x........:..x.................:.....:..:........:..x.:x..........x:.:.::.. 188M 152/188 80.9% 188/94230402 0.0% 0/188 0.0% 108728807 81485748 +9918 chr4 + 190214555 139073443 139073442 139073584 142 AGTTTACATACCAGGACTTCTTGAATCCCTCAAGCAGGTAGGAGATTCCATATGAAGCAGGGCTTCAGCAGCTTCAATTGTCTTATCTGTACAGTGTGCATTACTGCTGTGAACTGATGCTTCCACTGGAGGAAAAATAAGT chr4 + 94230402 30344160 30344159 30344301 30344160 30344159 30344301 142 AGCTGACATACCAGGACTCCTGGCATTTCTCAGGCAGGTAGGAGACTCCATATGAAGCAAGGCCTCCGCAGCTTCAATTGTCTTATCCGTGCAGTGTACATTGCTTCCATGAACTGATGCTTCCACTGCAGGACAAAAGAGT ..:.x.............:..x.x..::....:............:.............:...:..x....................:..:......:....:..x.::...................x....x...x:... 142M 119/142 83.8% 142/94230402 0.0% 0/142 0.0% 108729283 81485272 +3650 chr4 + 190214555 139073988 139073987 139074070 83 CGTGGTGGCACATGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCTGGAGAATCGCTTGAACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--....:.:.........::.:........x.:x.x...x.:...........:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 63040791 NA +3340 chr4 + 190214555 139074631 139074630 139074702 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.:........::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 63041425 NA +3168 chr4 + 190214555 139077569 139077568 139077642 74 GCACTATCT-TTTTATTTTTGTTTACATAAGTCAAGTAACTTTTAACAGAAATTTAAGAAATATTTCTCCTACTT chr4 + 94230402 6541520 6541519 6541594 6541520 6541519 6541594 75 GTATTACCTATCTTATTTGGTTTTACACAAGTCAGACTAACTTGAATAGAAAGTCGAGAAATCTTTCTCCCACTT .:.:..:..-.:......xxx......:......:::x.x:..x..:.....x.::......x.......:.... 9M1I65M 53/74 71.6% 75/94230402 0.0% 1/74 1.4% 132536049 57678506 +3375 chr4 + 190214555 139097494 139097493 139097546 53 GTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033212 76033211 76033264 76033212 76033211 76033264 53 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.:.........:.::........x.xx.x...x................ 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 63064282 NA +3172 chr4 + 190214555 139104370 139104369 139104439 70 CGTGGTGGTGCCCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATAACTTGAGCCCGAAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.......--..x......:.........::::........x.xx.x...xx......:...::... 11M2D57M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 63071173 NA +3181 chr4 + 190214555 139104510 139104509 139104568 59 AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAATATAGGAATGTAAAAAATTTAAAA chr4 + 94230402 74764025 74764024 74764083 74764025 74764024 74764083 59 AAAAAAAAAAAAAGAAAAGAAAATGGGATAAAACAGTCAGAAATGTAAAGAGTTGAAAA .............:.........x:::.x....x.xx:..:........:.:..x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 64340485 NA +3103 chr4 + 190214555 139105753 139105752 139105834 82 GTGGTGGCTCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGACTGCTTAATCCCAGGAGTTCAAGGTAGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........::........x:xx.x.:.x::...:.x.....:..:.:x:..:x.:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 63072552 NA +3838 chr4 + 190214555 139117814 139117813 139117896 83 CATAGTGGCACACACCTGTAGTCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....::...:--......:.....:.....::........x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 63084617 NA +3692 chr4 + 190214555 139123053 139123052 139123126 74 GTGCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAGGCAGGGGTTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::........x.xx.x...x..:........:.:..x:xx...:.::.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 63089849 NA +13306 chr4 + 190214555 139125119 139125118 139125367 249 AAAATGAGAAAGTTATAAATAATGAACATTTTATGAGATGTCTACCTGTTTCCACATTCTCGGTCTCAACTTCTTGTTCTTCTGCCACATCTTGCATCATATAAGTCTCATCATCATAAACCAGAACCTGGGCTGCATAGCCCTGCTCTAATCTGGCACTTGGAACTGGCTCCACAATCACTGCTGGATATTCAGAAACCTTTTCACTTTCCTATAAGAGCAAATTTAAAGAACAATCAACCTTTGTAT chr4 + 94230402 30355973 30355972 30356219 30355973 30355972 30356219 247 aaaaagaaagaaaagaaagaaatgaaaaaataaaTTAAAGTCTACCTGTTTCCACAGTTTCAGTCTCAATTTCTTGTTCCTCTGCTACATCTTGCATCAGATAAGTCTCGTCATCATAAACCAGGACCTGAGCAGCATAACCCTGTTCTAGTCTGGCACTAGGAACTGGCTCCACAATCACAGCTGGGAATTCAGAGACTGGCTCATTTTCCTATAGAAAGGAAAACAAAAACAAA--AACCTCTAAAT ....x..:.:.:xx:x..:x......x.xx.x.xxx:.x.................x.:..:.......:.........:.....:.............x.........:..............:.....:..x.....:.....:....:.........x....................x.....:x.......:..:xx:...:.........::.:x:..xx:...:.xx..--.....:.:x.. 236M2D11M 190/247 76.9% 247/94230402 0.0% 2/247 0.8% 108769146 81445409 +3618 chr4 + 190214555 139127835 139127834 139127907 73 TGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCCGGGAGGCAAAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:...........::........x.x..x...x::.........:.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 63094630 NA +3214 chr4 + 190214555 139128151 139128150 139128257 107 TATAGTCCTAGCTACTTGGGAGGCTGAGGCAAGAGGATTGCTTGAACCCAGTAGGTGAAGGCTGCA--------------------GTGAGCCATAATCATGCCTTTGCACTCCAGCCTGGCAACTG chr4 + 94230402 76033211 76033210 76033330 76033211 76033210 76033330 120 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGC-------TCCCAGCATGGTGACTG .:....:.:.........::........x.xx.x.:.x::...........x..x.xx:.....:.--------------------...x...x...x.x...-------::.....x...::.... 66M20I17M7D17M 72/100 72.0% 120/94230402 0.0% 27/100 27.0% 63094940 NA +3359 chr4 + 190214555 139132827 139132826 139132895 69 GTTATATTACTTTACATATATATATATATATATATATATATATATATAAAATATGTAATTTTTTTTTTT chr4 + 94230402 65285579 65285578 65285646 65285579 65285578 65285646 68 GTTGAATTA-TTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCT ...:x....-............:....x.........x.:.:.:.x..x..x....x...x......:. 9M1D59M 54/68 79.4% 68/94230402 0.0% 1/68 1.5% 73847248 NA +5896 chr4 + 190214555 139137617 139137616 139137734 118 TTGAATGCCTAACCTCTTGATTTTCTACTCCATTGCTGGAAAGCTCCAAAATAGTACCTCCACTGTCAACCACTGCTGATGTCATTGT-TATTCCCTGAGGAAGCTTCAAACGCTATTA chr4 + 94230402 30357146 30357145 30357264 30357146 30357145 30357264 119 TTGTTTGTCTGACCTCGTGATTTTTCATTCCATTGCTGTCGAACTCCAGGCCAGGGCCTCCAGTGTCAATCACTGCTGATGTCATGGTGCATCCCCTGAAGAGGCTTTGGGAGCTGCTA ...xx..:..:.....x.......::.:..........xx:.:.....::x:..x:......x......:...............x..-:..:......:..:....::::x...::.. 88M1I30M 86/118 72.9% 119/94230402 0.0% 1/118 0.8% 108780471 81434084 +3453 chr4 + 190214555 139140618 139140617 139140696 79 GTAGTGCAAACCTGTAGTCCCAGCTACTTGGTAGGCTGAGGTGGGAGGACCGCTTGAGCCCAGGAGGTTGAGGCCACAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--.x......:...........:x........x:xx.x.:.x.:.....:.....:..x..x:...:::.. 8M2D69M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 63107417 NA +3555 chr4 + 190214555 139149484 139149483 139149556 73 TGAGCTTGTGGTCCCAGCTACTTGAGAGGCTGAGGCAGGCAAATCACTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x...:..:............:........x.xx.::..x........:....:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 63116279 NA +3161 chr4 + 190214555 139151027 139151026 139151129 103 AAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAGCTATTTAATAAATTGTGCTGGTACAAA chr4 + 94230402 41112178 41112177 41112274 41112178 41112177 41112274 97 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG------GATAAATATTCCTGACCCAAA .::...::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x..::...------:......xx.x...::x.... 76M6D21M 66/97 68.0% 97/94230402 0.0% 6/97 6.2% 98038849 92175706 +3615 chr4 + 190214555 139161958 139161957 139162036 79 GTGGTGGACGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...--......:.........::.:........x.xx.x...x.:.........:.:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 63128757 NA +3134 chr4 + 190214555 139164507 139164506 139164565 59 TGCACCTGTAGTCCCAGCTACTCTGGAGGCTCAGTCAGGAGAATCACTTGAACCTGGGA chr4 + 94230402 76033205 76033204 76033263 76033205 76033204 76033263 59 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA .....x......:.........:x::.....x..:.xx.x...x..........::.:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 63131302 NA +3725 chr4 + 190214555 139166256 139166255 139166362 107 GTGCACCTGTAATCCCAGCTGCTTGGGAAGCTGAGACAGAAGAATCACTTGAACCCAGGAAGTGGAGGTTGCAGTAAGCCGACATCAGGCCACTGTACTCC---AGCCTG chr4 + 94230402 76033204 76033203 76033312 76033204 76033203 76033312 109 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ......x....:.:......:....::.:......x.xx:x...x.............:.:x.xx:..:..:..-..xx:..:::..:..x:x...::x..---...... 74M1D26M3I6M 72/106 67.9% 109/94230402 0.0% 4/106 3.8% 63133052 NA +3241 chr4 + 190214555 139173618 139173617 139173699 82 CGTGGTGGCACGCGCCCGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGAGAGGCGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:::....::.:..:--.....:...........::........x.xx.x...x.:.........:::..x:xx:..:..:. 15M2D65M 54/80 67.5% 80/94230402 0.0% 2/80 2.5% 63140421 NA +3216 chr4 + 190214555 139184381 139184380 139184442 62 TTTCATTTTCTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAGATAGGGCCTATCTCT chr4 + 94230402 56907966 56907965 56908027 56907966 56907965 56908027 62 TTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTT ....x.::..:x.::.:.:...:................:.....:.xx.....:.x...:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 82276415 NA +3677 chr4 + 190214555 139186689 139186688 139186755 67 TGGTGCAGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033202 76033201 76033264 76033202 76033201 76033264 63 TGGTGCA----CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......----.x....:.:...........::........x.x:.x...x.............:.. 7M4D56M 52/63 82.5% 63/94230402 0.0% 4/63 6.3% 63153487 NA +3095 chr4 + 190214555 139199040 139199039 139199098 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x:::.......::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63165834 NA +3790 chr4 + 190214555 139199982 139199981 139200064 83 CGTGGTGGCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCACGAGAATCACTTGAACTTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::....--......:...........::........x.x:.x...x.........:::.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 63166785 NA +3453 chr4 + 190214555 139205175 139205174 139205246 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:........::.:.:x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 63171969 NA +3068 chr4 + 190214555 139206127 139206126 139206184 58 CAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAGAATAAAAGAAAAGAAACACAGA chr4 + 94230402 93701981 93701980 93702038 93701981 93701980 93702038 58 CATAGCAAAAGGACAGCTCAAAAAAAAAACAGAAAGAGCAAAAGAAAAAAGACCCAAA ..x.....:.xxx..x.............x.:.....::.........:.:..x..:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 45504146 NA +3356 chr4 + 190214555 139206860 139206859 139206933 74 GTGTGCCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGGAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:........x..::........x.xx.x...x::...........:..x:xx:..:..x.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 63173656 NA +3224 chr4 + 190214555 139208650 139208649 139208731 82 TATTTGTCAGGGTTTGGTTTTTT---GGGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTGTTTTCTTTCTTTCTTTT chr4 + 94230402 59215494 59215493 59215578 59215494 59215493 59215578 85 TAGTTGTTGGTTTTTTGTTTGTTTTGGGGGCTTTTTTGTGCTTTTTTTTTTTTTTGTAATTGTTATAATTATTTTCATTTCACTT ..x....::.xx...x....x..---...x:......x..:..............x.::.....:.x:..x.:..:x....x:.. 23M3I59M 59/82 72.0% 85/94230402 0.0% 3/82 3.7% 79993156 NA +3341 chr4 + 190214555 139208654 139208653 139208726 73 TGTCAGGGTTTGGTTTT-TTGGGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTG---TTTTCTTTCTTT chr4 + 94230402 81099517 81099516 81099593 81099517 81099516 81099593 77 TGTCAAGTTTTGGTTTTGGGGGGTTTTTTGTTTGTTTTTCTGTTTTGTTTTGTTTTTGGATGAATTTGTCTTTCTTT .....:.x.........-xx.........x.........:.x....x.....x..x.x.x..---..x......... 17M1I44M3I12M 60/73 82.2% 77/94230402 0.0% 4/73 5.5% 58109137 NA +3153 chr4 + 190214555 139208662 139208661 139208701 40 TTTGGTTTTTTGGGTTTTTTTTTTGTTTTTTTTTTTTTTT chr4 + 94230402 69460578 69460577 69460617 69460578 69460577 69460617 40 TTTAGTTGTTTGGGTTTTTTTTGTGTTTTTTTTTTTTTTT ...:...x..............x................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 69748084 NA +3715 chr4 + 190214555 139212100 139212099 139212171 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 63178894 NA +3584 chr4 + 190214555 139230315 139230314 139230386 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 63197109 NA +3595 chr4 + 190214555 139237965 139237964 139238047 83 CATGGTGGTGGGCACCTGTAATCCTAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:.:..........:........x.xx.x...x.:........::.:..x:xx:..:..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 63204768 NA +3461 chr4 + 190214555 139243241 139243240 139243313 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTAGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x...........:.:..x.xx:..:x.:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 63210036 NA +3281 chr4 + 190214555 139254761 139254760 139254810 50 GAAACAAACAATAGGCATATATATATACACACACACACACACACACACAC chr4 + 94230402 64906701 64906700 64906750 64906701 64906700 64906750 50 GAAACATACAGTGGATATGTATATATGAACGTACACACACACACACACAC ......x...:.:.::..:.......:x..::.................. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 74348060 NA +3526 chr4 + 190214555 139262906 139262905 139263002 97 ATAAAAAAATTTTAAAAATTAGCATGTGCTTGTAGTCCCAGCCACTTGGGAGGCTGAGGTTGGAGGATTGCTTGAGCCCAGGAGTTGGAGGCTGCAG chr4 + 94230402 76033183 76033182 76033277 76033183 76033182 76033277 95 ATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...::..xx..x.x.x.:.--..::.x......:.....:.....::........x::x.x.:.x::.....:.....:..:.xx:.....:.. 22M2D73M 63/95 66.3% 95/94230402 0.0% 2/95 2.1% 63229723 NA +4739 chr4 + 190214555 139275282 139275281 139275403 122 CACTTACATAATATCCACCAGCACTGACTGTGACGCCTACAACCAGATAATAAATCATATTTGATCCAGATGATCCAGGGAATCTGTTAGATGACATCCGGCGCAGAGATGCTAGGAAAAAA chr4 + 94230402 30388642 30388641 30388763 30388642 30388641 30388763 122 CACTTACATAGAACAAAGCACCGAAAGCAGCAACCCCAGTGATGAGATAGTAAATCATGTTCTCTCCAGAAGAGCCAGGAACACTCCCAGATGACATCTGGCGAAGAGGTGCTACAAAAAAA ..........:x.:xx.x..x.:xx::.x.::..x..x:::.:x.....:........:..:xx......x..x.....:.xx..x::..........:....x....:.....x:...... 122M 82/122 67.2% 122/94230402 0.0% 0/122 0.0% 108886640 81327915 +3060 chr4 + 190214555 139281083 139281082 139281141 59 AAAACAAAACAAAACAAAAACCCCAAAAACAAAACAAAACAAACAAAACAAAAAAACAC chr4 + 94230402 13447552 13447551 13447610 13447552 13447551 13447610 59 AGATCATAACTGAGCAAACACTCTAAAAAAGAAACAAAACAACAACAACAAAAAAACAC .:.x..x...x:.:....x..:.:.....x:...........xx.x............. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 125833531 64381024 +3049 chr4 + 190214555 139290262 139290261 139290342 81 AAAGAACAGCAAAAGCCATCTGGTTTGTATTTCAATGCCTATTTCATTTTTACCTCTTTTTTTTTTTTTTTTTTTTGGTAG chr4 + 94230402 44980279 44980278 44980359 44980279 44980278 44980359 81 AAAGAACATATAAAGGAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAG ........xxx....xx..x.:...::.x.xx.xx.x.:.x..::x:..::...............:.........::... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 94309983 NA +3582 chr4 + 190214555 139291444 139291443 139291556 113 GCGCACCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG----TGA-GCCA---AGAT-TGTGCC-----ACTGCACTCCAGCCTGGTGGCT chr4 + 94230402 76033204 76033203 76033329 76033204 76033203 76033329 126 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACT .:....x......:.........:..:........x.xx.x...x::........::.:..x:xx:..:..:..----...-....---....-......-----x....x.-.....x.....:.. 74M4I3M1I4M3I4M1I6M5I7M1D14M 86/112 76.8% 126/94230402 0.0% 15/112 13.4% 63258240 NA +5271 chr4 + 190214555 139301750 139301749 139301983 234 GGCGGGAGCAGCGGGAGCAGCCGGAACGATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGCTCTTCAAGCGGATCTTGGTAAGTGTGAGGCTCCGGGCAAGCGGTGGGGAGGATTTAGCC-----GGTAACCGGGCCTGT-CACCCCT---------------AACCTCGGC-CCGGCGG-------GCACTGAGCCACTCCCGCCCGGGACCCCGCCTTCATAGCTCTCGTCAGGCCGAATGCATTGCTTTGCTCCCT chr4 + 94230402 30394224 30394223 30394466 30394224 30394223 30394466 243 GGCGGGAGC----GGAGCGGC-GGGACCATGCCGTCGGTCAGCCTGCCGCCCAAGGAGAACGCACTCTTCAAGCGCATCCTGGTGAGTgg-------cgggcgggagggcgggcaggccgcgccgcgcgggcggcggTCCCTGTGCTGCCCTGCGGAGGGCCGCGGCAGCCTCGGCACCGCCGGGAGGACCGCCCCGGGCCTCTCCGTCCGCGGACCGCTCCT-------CCCCGCCGGCGCGGCCGCCTT-CTTGGCTCCTT .........----.....:..-..:..x......x.x..x.....x..............:..:...........x...:....:....x-------.....::.x..xx...x:.:::xx...-----..:::.x.xx.....-.xx....---------------.:.......-...x...-------..x.:.:...x....xx..xx.....x.x...-------:.:..:.:.xx..:x:..x..-...x.....:. 9M4D8M1D68M7D27M5I15M1I7M15I9M1I7M7I32M7D21M1D11M 157/214 73.4% 243/94230402 0.0% 49/214 22.9% 108907526 81307029 +3686 chr4 + 190214555 139309219 139309218 139309290 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTATTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x:.:..........:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 63276013 NA +3218 chr4 + 190214555 139310314 139310313 139310383 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 63277117 NA +3273 chr4 + 190214555 139318724 139318723 139318796 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTAAACCCGGAAAGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x::...:.....:...:x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 63285519 NA +3223 chr4 + 190214555 139328536 139328535 139328591 56 TTTTCCTTTTCCTTTTCTTTTTCTTTTTCTTTCTTTTCTTTTTTTTTTTTTGAGAT chr4 + 94230402 12818521 12818520 12818576 12818521 12818520 12818576 56 TTCTCTCTCTCTTTTTCTTTTTCAATTTCTTTCCTCTTTTTGCTTATTTTTGAGAT ..:..::.:..:...........xx........:.:.:...x:..x.......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 126510015 63704540 +7268 chr4 + 190214555 139334160 139334159 139334264 105 TTTTGTTTTGACAGAGGTGTTATGAACATAAACAGTATAGAAATGGATTGAAATTCTGTAAACAAATACTTTCTAATCCCAAATTTGCAGAGCATGGAGGTAAGT chr4 + 94230402 30407146 30407145 30407250 30407146 30407145 30407250 105 TTCTTCTTCAACAGCGGTGTTATGAACATAAGCAGTATAGAAATGGGCTGAAGTTTTGTAAGCAGATCCTTTCTAACCCGAAGTTTGCAGAACATGGAGGTAAGT ..:.x:..::....x................:..............::....:..:.....:..:..x........:..x..:........:............. 105M 87/105 82.9% 105/94230402 0.0% 0/105 0.0% 108927014 81287541 +9149 chr4 + 190214555 139336825 139336824 139336967 143 TTCTTCTTTGTTTTTGAAAAT---AGAAACCTTGGCTATGAAAGGATTAACATTGAACTGTTTGGGGAAAAAGGAAGAAGCTTATGAATTGGTTCGTAGAGGTTTGAGAAATGACTTGAAGAGTCATGTGTGTATCCTTTTTGAGA chr4 + 94230402 30408765 30408764 30408910 30408765 30408764 30408910 146 TTCTTCTTTGATCTTTGTATTTTTAGAAACCTTGGCGATGAAAGGACTAACATTAAACTGTCTAGGGAAGAAAGAGGAAGCTTATGAGCTGGTGCGCAGAGGCCTAAGGAATGACTTGAAGAGTCATGTCTGTATCCTTTTGGAAA ..........x.:..x:x.x.---............x.........:.......:......:.:.....:..:..:...........::....x..:.....::.:..:....................x...........x..:. 21M3I122M 118/143 82.5% 146/94230402 0.0% 3/143 2.1% 108928060 81286495 +3307 chr4 + 190214555 139339744 139339743 139339795 52 CATCTCAAAAACAAACAAACAACAACAACAACAACAAAAAACAACAAAACCC chr4 + 94230402 24125109 24125108 24125160 24125109 24125108 24125160 52 CATTTGGAAAACAAACAAACAACAACAACAACAAAAAAAAAACACACAGCTC ...:.x:...........................x......xx...x.:.:. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 115214635 74999920 +3043 chr4 + 190214555 139339750 139339749 139339784 35 AAAAACAAACAAACAACAACAACAACAACAAAAAA chr4 + 94230402 89310885 89310884 89310919 89310885 89310884 89310919 35 AAAAACAAACAAACAAAAACAACAACAACAAAAAA ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 50028865 NA +14399 chr4 + 190214555 139340886 139340885 139341076 191 GTTGTACCCTTAACTAAATTCTTTAGGTTGGCACGTTTATGGCCTTCTTCAGAGGTCAGACAAGAAGTATGATGAAGCCATTAAGTGTTACAGAAATGCACTAAAATGGGATAAAGACAATCTTCAAATCTTAAGGGACCTTTCCTTACTACAGATTCAAATGCGAGATCTTGAGGGTTACAGGGTAAGTA chr4 + 94230402 30409597 30409596 30409787 30409597 30409596 30409787 191 GTAGAATCCTTAACAGAATTTTTCAGGTTGGCATGTCTATGGTCTTCTTCAGAGGTCAGACAAGAAGTATGATGAAGCTATCAAATGCTATAGAAATGCACTGAAATGGGACAAAGACAATCTTCAAATCTTGAGAGATCTTTCTCTGCTACAGATTCAAATGAGGGATCTTGAAGGTTACAGGGTAAGTA ..x.x.:.......x:....:..:.........:..:.....:...................................:..:..:..:..:...........:........:....................:..:..:.....::.:...............x.:........:................ 191M 165/191 86.4% 191/94230402 0.0% 0/191 0.0% 108931289 81283266 +11226 chr4 + 190214555 139342787 139342786 139342964 178 AAAGCCTAAGAA----------AAAGTGTTTATTTTTTTCCTTTTAAAGGAAACGAGGTATCAGTTACTTCAGCTTCGACCTGCGCAGAGAGCATCATGGATTGGTTATGCTATTGCTTACCATTTATTAGAAGATTATGAAATGGCAGCAAAGATTTTAGAAGAATTTAGGAAAACACAACAGGTAA chr4 + 94230402 30410267 30410266 30410452 30410267 30410266 30410452 186 AAAGCCTCAGAATAAAGTCAAGAAAATGAATAGCTACT--CTTTTGCAGGAAACAAGATATCAGTTGCTTCAGCTCCGACCTGCACAACGAGCGTCATGGATTGGCTATGCTATTGCTTACCATCTGTTGGAAGACTATGAAATGGCAGCAAAAATTTTAGAGGAATTTAGGAAGACTCAGCAGGTAA .......x....----------...:..xx..x:.x:.--.....:x.......:..:........:........:........:..:x....:...........:..................:.:..:.....:.................:........:...........:..x..:....... 12M10I16M2D148M 148/176 84.1% 186/94230402 0.0% 12/176 6.8% 108932520 81282035 +10810 chr4 + 190214555 139344182 139344181 139344353 172 ACAGACATCCCCTGACAAGGTGGATTATGAATATAGTGAACTACTCTTATATCAGAATCAAGTTCTTCGGGAAGCAGGTCTCTATAGAGAAGCTTTGGAACATCTTTGTACCTATGAAAAGCAGATTTGTGATAAACTTGCTGTAGAAGAAACCAAAGGTATTT----TTAAAAGA chr4 + 94230402 30410611 30410610 30410786 30410611 30410610 30410786 176 ATAGACATCACCTGATAAAGTGGACTACGAGTACAGTGAGCTGCTGCTGTATCAAAATCAAGTCCTCCGTGAGGCAGGACTACATAAAGAAGCGTTGGAGCATCTTTGTACCTATGAAAAACAAATCTGTGATAAACTGGCTGTTGAAGAAACTAAAGGTAATTACTATTCAAAGA .:.......x.....:..:.....:..:..:..:.....:..:..x:.:.....:........:..:..x..:.....x..x:...:......x.....:....................:..:..:...........x.....x........:.......x..----..x..... 164M4I8M 140/172 81.4% 176/94230402 0.0% 4/172 2.3% 108933571 81280984 +8533 chr4 + 190214555 139349445 139349444 139349589 145 TTTCTGTTTTTAATCAGGGGAACTTCTGTTGCAACTATGTCGTTTGGAAGATGCTGCAGATGTTTATAGAGGATTGCAAGAGAGAAATCCTGAAAACTGGGCCTATTACAAAGGCTTGGAAAAAGCACTCAAGCCAGGTAGTATT chr4 + 94230402 30412112 30412111 30412256 30412112 30412111 30412256 145 TTTCTTGTTTCACACAGGAGAACTCCTGCTTCAACTTGGCAGACTTGAAGAAGCTGTTGATGTCTACAAAGGATTGCAAGAAAGAAATCCTGAAAACTGGGCCTACTATAAGGGCCTAGAAAAGGCACTTAAACCAGGTAATGTT .....xx...:.xx....:.....:...:.x.....xx.:x.x:.x.....x....:x.....:..:.:............:.......................:..:..:...:.:.....:.....:..:.......:.:.. 145M 112/145 77.2% 145/94230402 0.0% 0/145 0.0% 108937333 81277222 +14571 chr4 + 190214555 139351174 139351173 139351652 479 TTTTTCTTTGTTTGCAGCTAATATGTTAGAACGGCTAAAAATTTATGAGGAAGCCTGGACTAAATATCCCAGGGGACTGGTGCCAAGAAGGCTGCCGTTAAACTTTTTATCTGGTAAGTGAGAATAATTGCAAAGGAATAGAAATGCTTTTATGATTTAAAGTTTCTTTTCTTGGTTTTAAGTATGAGTATGCATATTAAGTTTAAGCTATACATTGTTAGAGTTGTCTAACAACTCTGCTAAATGTAAGTTGGTAAATGTAAGTAAATACTTTGGTAAATGTAAGTAAATACTTGATAAATATAAGCGAAAAGGATTTTTCTCTTCCAAGGTGAGAAGTTTAAAGAATGTTTGGATAAGTTCCTAAGGATGAATTTCAGCAAGGGTTGCCCACCAGTCTTCAATACTTTAAGATCATTATACAAAGACAAAGAAAAGGTAAAGTGAAATATGATACTTTCTTTTGGCTACCATTTCTT chr4 + 94230402 30412674 30412673 30413056 30412674 30412673 30413056 383 TTTCTATTCTGTTCCAGCTAATATGATGGAGAGGCTAAAGATTTATGAAGAGGCCTGGACTAAATACCCAAAGGGACTAGTTCCAAGAAGATTACCATTAAATTTTTTGTCAGGTAAGTACGTTT--TTGTTGAGCAGC----------TAATAATCTACACTAGTGCTTCCT--TCTTAGATGCTAACAT-----------------------------------TCTAACAGCACT--------------------TGTACACAA-----TTGGGAAGT-------AATGTGTGGTAAAACAAAATCAACAGGTCTTTTTCCTCTCAAGGTGAAAAGTTTAAGGAATGTCTGGACAAGTTCCTAAGGATGAATTTCAGCAAAGGTTGCCCGCCGGTCTTCAACACCTTACGATCATTATATAAAGACAAGGAAAAGGTAG----------GATTCTTTTTTTC-----CCACTTTTT ...:.x..:xx..x...........x.:..:x.......:........:..:..............:..x.:......:..x........::.:..:.....:.....:..x.......:x.xx.--...:x:..x.::----------.x..:..:..x.x.xx:x:...:.--.:...::.::x.::..-----------------------------------.......:.x..--------------------....x::..-----....x..:.-------...::x..:....xxx..::x..x...x:....::..::........:........:......:....:..........................:........:..:........:..:...x..........:........:.........:----------...x....:...:-----...:..:.. 125M2D12M10D24M2D16M35D12M20D9M5D9M7D154M10D13M5D9M 287/383 74.9% 383/94230402 0.0% 96/383 25.1% 108938500 81276055 +6768 chr4 + 190214555 139354023 139354022 139354176 154 TAGGTGGCAATCATAGAAGAGTTAGTAGTAGGTTATGAAACCTCTCTAAAAAGCTGCCGGTTATTTAACCCCAATGGTAAGTCCTCAAGTTTTATGTTTTAAAAACATCTTGAAAATTTTAATACATTGTGA-AATTCTTAATCAGAAGGTCAGT chr4 + 94230402 30413438 30413437 30413591 30413438 30413437 30413591 154 TAGGTGGCGATCATTGAAGAGCTGGTGGTAGGTTATGAAACCTCCCTAAGAAGTTGCCGGTTATTTAACCCAAATGGTGAGTGTTAAACCGTCATACTTGAAATAAGTTGTGCCTGGTATAAT-CACTGCGACCATTCAGAGGCAGAGAATCAGT ........:.....x......:.:..:.................:....:...:.................x......:...x:.x..x:x.:..::..x...x.x:.:x..xxx:x.x....-..:..:..-x....xx.:x....:::..... 123M1D8M1I22M 112/153 73.2% 154/94230402 0.0% 2/153 1.3% 108940585 81273970 +12461 chr4 + 190214555 139357353 139357352 139357559 207 CTCATCTTGGTTTCTTCTCCCTCTTCTCCTAAGATGATGGAAAGGAGGAACCACCAACCACATTACTTTGGGTCCAGTACTACTTGGCACAACATTATGACAAAATTGGTCAGCCATCTATTGCTTTGGAGTACATAAATACTGCTATTGAAAGTACACCTACATTAATAGAACTCTTTCTCGTGAAAGCTAAAATCTATAAGGTAA chr4 + 94230402 30415209 30415208 30415406 30415209 30415208 30415406 198 CTCATTTT--TTTTTTCTTACTGT-------AGATGACGGTAAAGAAGAACCTCCAACCACTTTACTTTGGGTCCAGTATTATTTGGCTCAACATTATGATAAAATTGGACAGCCATCGCTGGCTTTAGAATACATAAATGCTGCTATAGAAAGTACTCCCACTTTGATAGAGCTCTTCCTTGTGAAAGCAAAAATCTATAAGGTAA .....:..--...:....:x..x.-------......:..x..:..:.....x........x.................:..:.....x...........:........x........xx.x.....:..:.........:.......x........x..:..x..:.....:.....:..:........x................ 8M2D14M7D176M 167/198 84.3% 198/94230402 0.0% 9/198 4.5% 108942144 81272411 +14002 chr4 + 190214555 139359704 139359703 139359901 198 GCATGCTAACTG-GTTTATTTTGCTTTTGTACCTTA---TAAGCATGCTGGAAATATTAAAGAAGCTGCAAGGTGGATGGATGAGGCCCAGGCCTTGGACACAGCAGACAGATTTATCAACTCCAAATGTGCAAAATACATGCTAAAAGCCAACCTGATTAAAGAAGCTGAAGAAATGTGCTCAAAGTTTACAAGGGTTTGT chr4 + 94230402 30416003 30416002 30416204 30416003 30416002 30416204 202 GTATACTTACTGAGTCTAATTTGCTTTTTTTTTTTTCTTTAAGCATGCTGGAAATATTAAAGAAGCTGCAAGGTGGATGGATGAGGCTCAGGCTTTGGACACAGCAGACAGATTTATCAACTCCAAATGTGCAAAATACATGTTGAAAGCAAACTTTATTAAAGAAGCAGAAGAAATGTGTTCTAAATTTACGAGGGTTGGT .:..:..x....-..:..x.........x.x::..x---................................................:.....:................................................:.:.....x...:.x...........x...........:..x..:.....:......x.. 12M1I23M3I163M 175/198 88.4% 202/94230402 0.0% 4/198 2.0% 108943701 81270854 +11639 chr4 + 190214555 139360378 139360377 139360638 261 AATGTTTTAAAAATTT---TTTTGAAAGAGTCCCAATCAGCTTAACAT--CTTTGTTTTTTAAAATTCTGTGGTAGAATGATGTCTATGATAAAAAGTGATCTTGAA-AATATTTGATTTCTGTATAGGAAGGAACATCAGCGGTAGAGAATTTGAATGAAATGCAGTGCATGTGGTTCCAAACAGAATGTGCCCAGGCTTATAAAGCAATGAATAAATTTGGTGAAGCACTTAAGAAATGTCATGAGATTGAGAGAGTAAGTACCT chr4 + 94230402 30417575 30417574 30417828 30417575 30417574 30417828 254 AATATTTTGAGGACCTCTGTTTTGAAA-------------TTTAGCATTACTTTGGCTTTTTAACTTGTGCTTTTAACTGATTAACTAATTGAGATGTATTTTTTAACAACGCTGTTTTTGCTTGTAGGAAGGAACCTCGGCAGTAGAGAACTTGAATGAAATGCAGTGCATGTGGTTTCAGACGGAATGTGCTCAGGCTTACAAAGCAATGAATAAATTTGGAGAAGCACTTAAGAAATGCCATGAAATTGAGAGAGTATGTATCT ...:....:.::.::.---........-------------:...:...--.....x:....x..x..x..:xx.x:.x....xxx:xx:x.:.:.x..:x.:..x..-..:::.xxx...x:x.:...........x..:..:........:..........................:..:..:........:........:....................x.................:.....:............x...:.. 16M3I8M13D8M2I57M1I159M 190/248 76.6% 254/94230402 0.0% 19/248 7.7% 108942803 81271752 +17516 chr4 + 190214555 139361715 139361714 139361941 227 TTTTGTTAGCATTTTATAGAAATCACTGATGACCAGTTTGACTTTCATACATACTGTATGAGGAAGATTACCCTTAGATCATATGTGGACTTATTAAAACTAGAAGATGTACTTCGACAGCATCCATTTTACTTCAAGGCAGCAAGAATTGCTATAGAGATCTATTTGAAGCTTCATGACAACCCCCTTACAGATGAGAATAAAGAACACGAAGCTGATACAGGTAT chr4 + 94230402 30420322 30420321 30420548 30420322 30420321 30420548 227 TTGTGTTAGCATTTTGTAGAAATCACAGATGACCAGTTTGACTTCCACACTTACTGCATGAGGAAGATTACTCTTAGGTCTTATGTGGACTTGTTAAAACTAGAAGATGTACTTCGGCAACATCCATTCTACTTCAAAGCAGCGCGGATTGCCATAGAGATATATTTGAAGCTTCATGATAATCCCTTAACAGATGAAAATAAAGAACACGAGGCTGATACAGGTAT ..x............:..........x.................:..:..x.....:..............:.....:..x...........:.......................:..:........:........:.....:x.:.....:........x.................:..:...:.x........:..............:.............. 227M 201/227 88.5% 227/94230402 0.0% 0/227 0.0% 108941393 81273162 +15394 chr4 + 190214555 139370202 139370201 139370420 219 TGCCTGCAGCAAACATGTCTGACAAAGAGCTAAAGAAGCTACGTAATAAACAAAGAAGAGCTCAAAAGAAAGCCCAGATAGAAGAAGAGAAAAAAAATGCAGAAAAAGAAAAGCAGCAGAGAAATCAGAAAAAGAAGAAGGATGATGATGATGAGGAGATAGGAGGTCCAAAAGAAGAACTTATTCCAGAGAAACTGGCCAAGGTACTTAATAATAGTG chr4 + 94230402 30421642 30421641 30421860 30421642 30421641 30421860 219 TGTGTACAGCAAATATGTCTGATAAGGAGCTAAAGAAGCTACGAAATAAGCAGagaagagcacagaagaaagcacagctggaagaggagaagaagaatgctgagaaagagaagcaacagaggaatcagaaaaagaagaaagatgatgatgatgaagaaATTGGAGGCCCGAAAGAAGAACTTATTCCTGAAAAATTGGCCAAGGTGCTTACTAATGTTG ..:x.:.......:........:..:.................x.....:..:........x..:........x...x.:.....:.....:..:.....x..:.....:.....:.....:.................:..............:..:..x.....:..:.................x..:...:..........:....x....:x.. 219M 184/219 84.0% 219/94230402 0.0% 0/219 0.0% 108948560 81265995 +8634 chr4 + 190214555 139376362 139376361 139376481 120 TAGGTTGAAACTCCATTGGAAGAAGCTATTAAATTTTTAACACCGTTGAAGAACTTGGTGAAGAACAAGATAGAGACTCATCTTTTTGCCTTTGAGATTTACTTTAGGAAAGGTAGGCAA chr4 + 94230402 30423864 30423863 30423983 30423864 30423863 30423983 120 TAGGTTGAAGCACCTTTGGAAGAAGCCATTAAATTTTTAACCCCCCTGAAGAATTTAGTGAAGAACAAAATAGAGACGCATCTCTTTGCCTTCGAGATTTATTTTCGAAAAGGTAGGTAA .........:.x..x...........:..............x..x:.......:..:...........:........x.....:........:........:...x.:.........:.. 120M 103/120 85.8% 120/94230402 0.0% 0/120 0.0% 108952498 81262057 +8426 chr4 + 190214555 139378741 139378740 139378878 138 TTTCTCTTTTTATAGAAAAGTTTCTTTTGATGCTACAATCAGTAAAGAGGGCATTTGCTATTGATTCTAGTCATCCCTGGCTTCATGAGTGTATGATTCGTCTCTTTAATACTGGTATGTTTTTGTTTTCCATTACTT chr4 + 94230402 30424551 30424550 30424688 30424551 30424550 30424688 138 TTCTTTCTTTTCCAGAGAAGTTCCTTCTGATGCTTCAGTCTGTGAAGAGAGCTTTTGCTATTGATTCCAGTCATCCTTGGCTTCACGAGTGTATGATTCATCTCTTCAGCAGTGGTATGTATCTGTTGGGTATCACTT ..::.::....x:...:.....:...:.......x..:..x..:.....:..x..............:........:........:.............:......:.::.x........x.:....xxx:..:.... 138M 108/138 78.3% 138/94230402 0.0% 0/138 0.0% 108954190 81260365 +10888 chr4 + 190214555 139384763 139384762 139385032 270 ACAAAAATAAACTTTT---GTAAACTTTATCAGAGTATTCAACTGCTAAGATTTTATTTTTAATTTATTCAGCAGTGTGTGAAAGTAAAGATTTATCTGATACAGTTAGAACAGTATTAAAACAAGAAATGAATCGTCTTTTTGGAGCAACGAATCCAAAGAATTTTAATGAAACTTTTCTGAAAAGGAATTCTGATTCATTGCCACACAGATTATCAGGTAATCACTTTATTTTATCCTTAGCCTTCTAAAACAACTTCAGTAATTTTAATG chr4 + 94230402 30425116 30425115 30425376 30425116 30425115 30425376 261 ACAAAAATAAAAACATAAAGTAGATTTTACTGTGAATTACCTCTGCTTAACTTTT-TTTCCACTTCATT----AGTATCTGAAAGTAAGGATCTGCCTGATGCAGTTAGAACAGTGTTAAACCAAGAAATGAATCGGCTTTTTGGAGCAACTAATCCAAAGAACTTCAATGAAGCTTTCCTTAAAAAGAACTATGACTCGCTACCGCATAGGTTATCAGGTATT---TTGCCTTCCTCCTTTTCCTGCC----TGGCTTCTGTATTTTCATTG ...........xx:x.---...:.:....:::x::xx.x.xx.....x.:x....-...::.x..:...----...:.x.........:...:.::.....:.............:.....x..............x..............x...........:..:......:....:..x....:...:.x...:..::.:..:..:..:..........x.---..xx:..:x.....xx...x.:----:::....x...x...:.x.. 16M3I36M1D13M4D151M3D22M4D20M 191/258 74.0% 261/94230402 0.0% 15/258 5.8% 108959647 81254908 +7481 chr4 + 190214555 139386092 139386091 139386234 143 GTTTTACCTTGAA--ATAAATTTCCTATTTCCCTCTCATTTAGCTGCCAAAATGGTATATTACTTAGATCCTTCTAGTCAGAAGCGAGCTATAGAGTTGGCAACAACACTTGATGAATCTCTCACTAACAGAAACCTCCAGGTAA chr4 + 94230402 30426040 30426039 30426181 30426040 30426039 30426181 142 GTCTTCCTTTGAGTGATGAAGCTTATGTTTCT---TCTTGTAGCTGCCAAAATGATGTACTATTTAGATCCTTCCAGTCAGAAAAGAGCGGTGGAGCTGGCAATGACCCTGGATGAATCCCTCATTAACAGAAATCTTCAGGTAA ..:..x.:....:--..:..x:.:x.:....:---..x.x..............:.:..:..:...........:........:x....x:.:...:......::..x..x........:....:.........:..:....... 13M2I17M3D110M 108/140 77.1% 142/94230402 0.0% 5/140 3.6% 108960052 81254503 +95062 chr4 + 190214555 139387867 139387866 139389421 1555 TTTTTTTCTTTCCTTAGACATGTATGGAGGTATTGGAAGCCTTGTATGATGGTAGCCTAGGAGACTGTAAAGAAGCTGCTGAAATTTATAGAGCAAATTGTCATAAGCTTTTCCCTTATGCTTTGGCTTTCATGCCTCCTGGATATGAAGAGGATATGAAGATCACAGTTAATGGAGATAGTTCTGCAGAAGCTGAAGAACTGGCCAATGAAATTTGAACATCACTAAACAAGCAAATGGAATGACTTTGGACCATATCTAGTATATAATATTTTTGTCACGCACCTGCTGCATTGCTCTAACTTACAC--AGAATG--AGAGGAGTAAATGTTCTTGCCTTCAAATAGTGTT-TTACGTTTTTTATCCTGCTGAAAAAG--TATATATAAAATATCTAAC--ATTACAGGATAGAG---GTTCAGTTTCTTAAAAAATTAAAGCTGCTAAAATTGAGTGGTTAAAAAAGATACCTTATCCTATTCCTCCCCACCCACCCATGTTTTTAAACTAATTTATATAAAATCTGGAGGCTGTTACAGCTAACAAAGCAGGTGTGTGGCAGAAATATTACTTTAAATTTGTCTTGTGAGATTTTACTA-TATCTCAGACAGCATAAATGCTGTTTTAGCACTGGATTCTTTCACTGAGCACAAAGAGTTGTTGGGGCTTTAGCATCTGACTGATTTTGTTACGGGGTTGATTCTGACCATAGGAAGTATGCAATGTG-AATCACTATTTACAGAGAAACCTACAACAGATGCTTGATGTTGTAGAAACTGGGACATATAGATACCAAGCAAAATTATAAGAAACCTATAAGGTGTTCAATACGCTTGT---GTTTCCAAAATTCACTGTACATGATCAGTTTGGTGTTCTTGTACCACAG-TTTTTAACTGAAGGAACCAGTTGTAACAGTCTCAATTTTAACTAAAACTTGAA-----------GAACTAAAACAACAATGC------------AAACCTTTCAGCATTGTTTGGCCAAACTTGTTAAAACTGTAATGCAAGAACCAA--------ATGCACTGTGATGTGGCACCAACTAATTAGCA-----AGCATGAATTTTTCACCCAAGAGTGAA---AAAAGGAAAATCTACCATGGCTTGAAGTT--AAAGAGCAGAACTCCTGACTACCATTCTATGACTGATCAAAAGACTAATAGTTAAAAACCTCAGCAGGCCTTGTTCACGATATGCAG---AAAAAAAAGTGCTGCAGTTTAGATACCTCTGGAATTTTTCCACAGTGTCACAGGTTTGTAATACTTGAAGCCCTACATTTCTAAGAATATATTTCTTGCTCAGTTGTTTCAGGCAAGCCCAAGACTTTGTAATTTTTAAAGGGCCCAAGATTTTTTTTTTTTTTTTTTTTTTCAAATAACAGACCAGCTTCTTTTTCTTGCAGTTACAGATGTAATTTCCTTTTTGTTGTCAAACATAAGGTACCAAATATGATGCAATAAATTGTTTTGAAAAACAGTTGTGTGAATATTTCAACTAATCTGTGTTGGGCTTCTGTGAAATACACAGGTGGAAACAGAGGTGCAAGCCAGAGGCAATGTAATATGCTGTAAGGCTA chr4 + 94230402 30426986 30426985 30428552 30426986 30426985 30428552 1567 TTTTTCTCTTTAATTAGACTTGTATGGAGGTATTAGAAGCTTTATGTGACGGTAGCCTTGGAGACTGTAAAGAAGCATCTGAAACTTACAGAGCAAATTGTCATAAGCTTTTCCCTTATGCTTTGGCTTTCATGCCCCCTGGTTATGAAGAGGATATGAAGATCACAGTTAATGGAGATAGTTCTGCAGAACCTGAAGAACTGGCCAATGAAATATGAATA--ACTGTATTGGAAAA--AAATGACATTGGACCATATCTGGTGTATAATATTTTTGTCACGCACCTGCTGAATTGTTCTAACTTACACAGAGAATGGAAGGGGAAAAAAAACTGTTGCCTTCAAATAGTTTTACTTTTTTTTTTATCCTGCTGACAAAGTATATATATAAAATATCTAACATATTACTGGATATAGGTTGTTTGGTTTCTTAAAAATTAAAAGCTGCTAAAATTGAA----GAAAAAAAAGCCCTTGTCCT-----TACCTACCTACCCATGTTTTTAAACTAATTTATATAAAATCTGGAGGC--GCGGAGCCTTCAGAGCAGGTGTGTGGCAGAAATATTACTTTAAATTTGTCTTGTGAGA--TTACTGTTATCTCAGACAGCAAAAATGCTGTTTTAGCACTGGATTCTTTCACTGAGCACAAAGAGTTGTTGGGGCTTTAGCATCTGACTGATTTTGATACGGGGATGATTCAGTCCATAGGAAGTATGCAATGTGAAATCAGAATATACAGAGAAACCTGCAACGTACACGTTGCGTTGCGGATGCTGGGACATACGGATAGCAAGCAGAAT--TAAGAAAC--ATAGTGTGTTCAATAAGCTTGTTGCGTCTCTGAAATTCACTGTACACGATCAGTTTGGTGTTCTTGCACCACAGTTTTTTAACCGAAGGAACCAGTTGAAACGATATC--TCTGAATTAAACACAGAAGGCAGGGTGGGGAGAATAAATAACGTTGCTGGTTTTGAGATGAACCCGTCTGAATAGGTTGGCCAAACTTTTTAAAACTGTAATGCAAGAACCAAATAAAATTATGCACTGTGATGTGGCACCAACTAATTAGGAAAGATAGCATGCATTTTTCACGT-AGAGTGAAACCAAAATGAGAACATACTATGGCTTGAAGTTGCAAAGAGGAGAACTCCTGACTACCGTTC--TGACTGATCAAGAGACTAATAGTTTAAAACCTCAGCAGGCCTTGTTCACGTTATGCAGAATAAAAAAAAGTGCTGCAGTTTAGATACCTCTGGAACTTTTCCACAGTGTCACAGGTTTGTAATACTTGAAGCCCTACATTTCTAAGAATATATTTCTTGCTCAGTTGTTTCAGGCAAGCCCAAGACTTTGTAACTTTTAAGGGGCCCAAGATTTTTTTTC---------------AATAACAGACCAGCTTCTTATTCCTGCAGTTACGGATGTAATTTCCT-----TTGTCAAACATAAGGTACCAAATATGATGCAATAAAACGTTTTGAAAAACAATTGTGTGAATATTTAAACCAATCTCTGTTGTACTTT--GAAAATGAATGGGTT--CACAAGAGTGCAGCTCAGGGTTGGCTTACTATGCTGTCCGGTTA .....:.....xx......x..............:.....:..:.:...:........x.................xx......:...:...............................................:.....x................................................x......................x....:.--...:x.:x:.x...--:......x.............:..:...........................x....:............--......--..:...:x...x::.x...............x..-:.x:x................x....--...................--.....x.....x..---...::............x.x.................:----x......:.xx....:....-----.x..:...:.......................................--x::x...:xx..:.............................................--.....:-..............x..........................................................................x.......x......x.x.....................-.....xx..x.............:....:x.::.x.x::....::..x:..........::....x......:...--........--...:x..........x......---..:..::..............:...................:.......-........:..............x...::.x..--.:.x..:....xx:x...-----------..:xxx...:...:x...------------:....:x..x.x..x.x............x........................--------..............................x.-----......x.........x:-........---....x..:..:x...:.............--......x................:...--...........:............x.........................x.......---..................................:.................................................................................................:......:..................:---------------...................x...:.........:.............-----....................................x:.............:..............x...:.....x.....x:...:--x:....:x.::...x--x...:::.....:x:...:.x::::x..x........xx..:.. 221M2D14M2D70M2I6M2I34M1I26M2I19M2I14M3I38M4D20M5D48M2D58M2D6M1I128M1I76M2D8M2D22M3I49M1I33M2D18M11I18M12I54M8I32M5I18M1D8M3I29M2I27M2D58M3I159M15D47M5D88M2D15M2D44M 1322/1505 87.8% 1567/94230402 0.0% 112/1505 7.4% 108960881 81253674 +3278 chr4 + 190214555 139408531 139408530 139408590 60 TGCGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAAACGCTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x....:.:.......:...::........x.xx.x...:.:........::.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 63375326 NA +3173 chr4 + 190214555 139410475 139410474 139410599 125 GAGGGAAGGGAGAAGGAAGGAAGGAGAGAGAAAAGAATGGAAGGAAGGAAGGAAAAAGAAAAGAATGAAAGGAAGGAAGGAAGGAAAGAGAAAGAAAAAGAAAGAAAG--AGAAAAAGAAAGAAAAG chr4 + 94230402 398520 398519 398646 398520 398519 398646 127 GATGGAAATGGAGAGGGAGAAAACAGAGCTCCGAGGCAGGGAGGGGTAAATCAGCAGCAGGAAAAAGCATGCAAGTTTGGAAGGAAAGAGAAAAAAAAAAAAAAAAAGTTGGAGGTAGGAGGTAAAG ..x....:x.:::...:..:..:x....xxxx:..:xx..:...::x:..xx.:x.:x.::.:..x.x.x.x...xxx...............:.....:...:....--:..::x..:.:.x.... 108M2I17M 76/125 60.8% 127/94230402 0.0% 2/125 1.6% 139011955 51202600 +3160 chr4 + 190214555 139411121 139411120 139411184 64 CCATCTCAAAAAAAAAAAAAAAAAAAAAAAAGAACAGCAAGGAGGCCAGTGCTGCT-----GGAGCACA chr4 + 94230402 8746554 8746553 8746622 8746554 8746553 8746622 69 CCAGTTTGGAAAAAAAAAGAAAAAAAAAGAAGAATAGTAAAGGAGTAAGTGCCACTCTGTGAGAGCACA ...x:.:::.........:.........:.....:..:..:.::.:x.....::..-----:....... 56M5I8M 47/64 73.4% 69/94230402 0.0% 5/64 7.8% 130664567 59549988 +3303 chr4 + 190214555 139413262 139413261 139413300 39 GGCTTTTGTTTTTTTTGTGTGTTTGTTTGTTTTGTTTTT chr4 + 94230402 12568751 12568750 12568789 12568751 12568750 12568789 39 GGCTTCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTT .....:............x.................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 126844511 63370044 +3220 chr4 + 190214555 139413267 139413266 139413321 55 TTGTTTTTTTTGTGTGTTTGTTTGTTTTGTTTTTGGCTTAAATTGTTTGGTCTCT chr4 + 94230402 53703193 53703192 53703244 53703193 53703192 53703244 52 TTGTTCTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTCTAGAA---TTTGATCTTT .....:.......x.....................x..x:..---....:...:. 42M3D10M 45/52 86.5% 52/94230402 0.0% 3/52 5.8% 85710074 NA +14461 chr4 + 190214555 139454180 139454179 139454452 273 GGGGCGGGTCGGGGG-------AATGGCTGAGGAGATGGAGTCGTCGCTCGAGGCAAGCTTTTCGTCCAGCGGGGCAGTGTCAGGGGCCTCAGGGTTTTTGCCTCCTGCCCGCTCCCGCATCTTCAAGATAATCGTGATCGGCGACTCCAATGTGGGCAAGACATGCCTGACCTACCGCTTCTGCGCTGGCCGCTTCCCCGACCGCACCGAGGCCACGATAGGGGTGGATTTCCGAGAACGAGCGGTGGAGATTGATGGGGAGCGCATCAAGGTGAGCGG chr4 + 94230402 30437432 30437431 30437704 30437432 30437431 30437704 273 ggggcgggcgTGAGGCGGCGGCGATGGCGGCCGAGCTGGAGTCTTCGCTGGAGCTGAGCTTCACGGGCAGCGGCACGGTGCC--GGGCGGCGGG----CTGCCCCCCGCTCGCTCCCGCATCTTCAAGATCATCGTCATCGGCGACTCCAACGTGGGCAAGACGTGCCTCACCTACCGCTTCTGCGCCGGCCGCTTCCCGCAGCGCACCGAGGCCACCATCGGCGTGGACTTCCGCGAGCGCGCCGTCACCATCGACGGGGAGCGCATCAAGGT-Agcgg ........:xx.:..-------:.....x.xx...x.......x.....x...x::.....:x..xx......x:.:...:.--....xx.:..----:....:..:..:....................x.....x..............:...........:.....x.................:...........xx.x..............x..x..x.....:.....x..:..x..x..x:xx..:..:.................-..... 15M7I60M2D10M4D176M1D5M 214/266 80.5% 273/94230402 0.0% 14/266 5.3% 109016748 81197807 +3076 chr4 + 190214555 139459102 139459101 139459148 47 TTGTTTCTATTAAGAACAAATCCCATCTCAAAAAAAAAAAAAAAAAA chr4 + 94230402 33767094 33767093 33767140 33767094 33767093 33767140 47 TTGTCTTTATTAAAAACAGACCCCCCCCCAAAAAAAAAAAACAAAAA ....:.:......:....:.:...x:.:.............x..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 105692008 84522547 +3059 chr4 + 190214555 139467279 139467278 139467335 57 CACCTCTTTCCCCACCACGCCCCCCGCCGCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757801 53757800 53757857 53757801 53757800 53757857 57 CACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ........xxx:.x..x.x......x..x.:........::.......:........ 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 85709478 NA +3256 chr4 + 190214555 139467728 139467727 139467800 73 TGCACCTGTAGTCCCAGCTACTCAGGTGGCTGAGGCAGGAGGATTCCTTGAGCCCAGGAGGTTGAGGCAGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::x.......x.xx.x.:.x:x.....:.....:..x..x:...x.:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 63434523 NA +33215 chr4 + 190214555 139472659 139472658 139473340 682 TTTTCCTCTTTTT--CTTCCCATTTTTAGATCCAGCTATGGGACACAGCAGGACAAGAACGATTCAGAAAGAGCATGGTTCAGCACTACTACAGAAATGTACATGCTGTTGTCTTCGTGTATGATATGACCAACATGGCTAGTTTTCATAGCCTACCATCTTGGATAGAAGAATGCAAACAACATTTGCTAGCCAATGATATACCACGGATTCTTGTTGGAAATAAATGTGACTTGAGAAGTGCCATACAGGTACCCACAGACTTGGCACAAAAATTTGCTGACACACACAGTATGCCTTTGTTTGAAACGTCTGCTAAAAACCCCAATGATAATGACCATGTGGAAGCTATATTTATGACCTTGGCTCATAAGCTTAAGAGCCACAAACCATTAATGCTTAGTCAGCCCCCTGATAATG---GAATTATCCTGAAGCCTGAACCAAAGCCTGCAATGACGTGCTGGTGCTAAATAACAGTCTTTATTA--TATTATCTAATTTTGACTAAAGAAATACTTTTGAAGTATGACAGTAT--TAAGTCATAAGATTTAATCTCAACTATAATGGGTCATCTTGACACTTTGCTGTTTGTCATTG-----------------------------TCACGCTTTTGTATTTTGT--------------ATCTACTTAAGTTTGTCACTGTGACAACACAGGAAAAGTTGGTTTTCAGGTGAGATTGAAAATGAAGCAA chr4 + 94230402 30441180 30441179 30441904 30441180 30441179 30441904 725 TTTCTCTCTTTTTACCCTTCCCTTTTCAGATCCAGCTATGGGATACAGCAGGCCAGGAGCGCTTCAGAAAGAGTATGGTGCAGCACTATTACCGGAATGTACATGCTGTCGTGTTTGTGTATGATATGACAAACCTTGCCAGTTTTCATAGTCTGCCGTCGTGGATAGAGGAATGCAAACAACACCTCCTTACCAACGATATACCACGGATTCTTGTTGGAAATAAATGTGACCTGAGAAATGCCATTCAGGTACCTACGGACTTGGCCCAGAAGTTTGCCGATACGCACAGCATGCCGTTATTTGAAACCTCTGCCAAAAACCCCAATGACAATGACCACGTGGAGGCCATATTTATGACACTGGCTCACAAGCTTAAAAGCCACAAGCCACTAATGCTAAGTCAACCCCCAGATCGTGATCAAATACACATAAAGCCTGAACCGAAACCCGCCATGACCTGCTGGTGTTAAATTTCACTATTCATTAGCTGCCACCTTGTCCCG--TGTGCAAACGCTCCAAAGTTACGATCTTGTCATAGATCA-AGGGTTTGGTAGCAATTATAGCAAATCCCTTTGGCACTTTACTG--TGTTGTTGGTTTTTTTTCTGGTGTAGATGTGCCCATCTCATTTTTTTGCACTTCGTTATTCTACTTTCTGAATTACTGAAGTT--TCACTATAAATATGCAGG-AAAGTAACCTTTCAAGTGAAGTTT-TAACAAAGCAA ...::........--.:.:..x....:................:........x..:..:..x...........:.....x........:...x.:..............:..x..:..............x...x.x..:...........:..:..:..x........:..............::.x..x:....:....................................:......:......x........:..:........x..:..:.....:..:..:.....:.....x..:........x.....:..............:........:.....:..:...........x:.......:........:........:...:.......x.....:.....x...x:..---:...xxx.x.:...........:..:..:..x.....x........:.....xx..x.x..:....--.:::.:..x:.:::.--.:x:x...::..::x:.:x..:..:xx.:.--..::...-.:.:...::.xx...:....:::::..x::...:......:...--...::...-----------------------------...:x:.....:.:..:..--------------.x:....x.....--.....:.:.xx.::....-.....x:x:.....:....::..x-x..::...... 13M2I405M3I66M2I15M2D30M2I7M1D44M2D8M29I19M14I13M2D18M1D24M1D11M 518/673 77.0% 725/94230402 0.0% 61/673 9.1% 109031479 81183076 +3554 chr4 + 190214555 139479651 139479650 139479748 98 ATTGTTCCACTGCACTCCAGCCTGTGGGACAT----AGTGAGACCCTGTCAATCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCACACACACACACACACAA chr4 + 94230402 12601249 12601248 12601340 12601249 12601248 12601340 92 ATTGTCCCTCTGAGTTTCTCTTTGTGAGCCATTTATATTTAAATACTGTAAAACGCTCTCTCTCTCTCT----------CTCTCACACACGCACACACACAA .....:..x...x::.:.xx::....:.x...----.x.x.:.:x....x..x.x..............----------...........:........... 32M4I33M10D23M 67/88 76.1% 92/94230402 0.0% 14/88 15.9% 126878402 63336153 +3222 chr4 + 190214555 139479706 139479705 139479745 40 CTCTCTCTCTTTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::......:............x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 64231657 NA +3436 chr4 + 190214555 139479708 139479707 139479747 40 CTCTCTCTTTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::....:............................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 64231659 NA +3031 chr4 + 190214555 139479710 139479709 139479747 38 CTCTCTTTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248086 75248049 75248048 75248086 38 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACA ..::..:..............x................ 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 64231661 NA +5146 chr4 + 190214555 139492731 139492730 139492825 95 CCCTCCCTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTCCTTTCCTTCCTTCCT------TTTTCTTTCTTTCCTTTTTT chr4 + 94230402 27163702 27163701 27163802 27163702 27163701 27163802 101 CTCTACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCctttctttctttctttctttcttttctttctttcttttctt .:..x.::....:.x.:.:..::.:...x.:...xx.....:................:......:...:...:.------.............:...:.. 75M6I20M 73/95 76.8% 101/94230402 0.0% 6/95 6.3% 112329029 77885526 +3236 chr4 + 190214555 139503048 139503047 139503120 73 TGCTCCTGTAGTCCCAGCTACTTGGGAGCCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:...........::..x.....x.xx.x...x::........::.:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 63469843 NA +3410 chr4 + 190214555 139505453 139505452 139505531 79 GTGGTAAGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCGCTTGAATCCCGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--..:.x....:.:...........::........x.xx.x..:x.:......:..x.:..x.xx:.....:.. 5M2D72M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 63472252 NA +11395 chr4 + 190214555 139506053 139506052 139506355 303 TTTAATACTTGCATTGTTTCTATAGCGCAATTATAGCAATCTTTAAATTTACTTTCATTACAAATATTTGTCAA---------------------GTTTTGTTT--------------CAGAAACA-------TTTTTCCTACTCTCTTGCATCATGCACCCAGACACACTACAAAAAACTCATTCATAACAC---AGTAAGGGCAAACATTATTCATGTAAACATCTTTCATTAATTTCCCATAATTTAAAAAAATC----ATAGAATTATAGATATTGAATAAGGCTCATAGTTTTAGTTCAAATTCCACAAGAGACCAA---------AGATGCTCGTTAACCGTGATGGGGTTAACT chr4 + 94230402 30459992 30459991 30460348 30459992 30459991 30460348 357 TTTAATATCTGCATTGCCTCCGTAGCGCAATTAAAGCGATCTTTAAAAGT-CACTTATTACAAATGTTTCTCGAGTCTGTTTGTTGTTGTTTTGTGTTTTGTTTTTTGTTTTTTTCCCCAGAAACGGTTTTTTTTTTTCTTGCTTCCTTGCA-CATACACCCAAACACACTATAAAAACCTCATTCATAACATCAAAGGAAGGGCAATCGTCAGTCATGTAAACATCTTTCTTAGAGTTATC--CATTTTTAAAAGTCATGAATAAACCTACAGATGTTCAGTAAGGCTCATAGTTCGAGTACAAATGTCATAAAACACCTATCAAGTACTGTATACAAGTTATATACGCCGGGGTTAACT .......::.......::..::...........x...:.........xx.-.x:.:.........:...x..:.---------------------.........--------------.......:-------......:.:..::......-...:......:........:.....x.............:---..x........x.:.:.x.................x.x:.x..x:.--x....xx....:..----...:.x:..:....:..x.:..............:x...x.....x:..:..:.x...x.---------:x..:.xx....xx:::.x:.......... 50M1D23M21I9M14I8M7I19M1D40M3I46M2D14M4I60M9I30M 230/299 76.9% 357/94230402 0.0% 62/299 20.7% 109046061 81168494 +5354 chr4 + 190214555 139507547 139507546 139507878 332 ATATTCATTCTATCATGAAAATATTTCATACAAACATCTATTTACATACAAACACATTAAAATTT-GTGAAAAGGG--TTCCCACCCCTGTGGTTGTATGGCTTGAAATAGTTTCATTGCTTTGAA--------------------TATGTACGCACACATTTGGCAAAAGAAAACTATTACAATTTAGTA-TTTTTAAAATTAAAAAAAGTGACAACGAGT-----TTCCAAATTCCTGAAGGGAAAGATAAAAGAAAAACAATAATAATCTATCAAGGTACCCCAAGTAGAT-GTAAATTTGATATACTTTGTGAACCTTTGATCTGTGGCAAATAAACATTACAACTGTCAGTCTTGCA chr4 + 94230402 30460848 30460847 30461181 30460848 30460847 30461181 334 ATACGCATTCTACCATGAAAGTATTTCACACGGACGTCGTTTGACGTATAAACGCGCTAAAACCTGGTGAAGAGGGTCTTCCCGCACTCATG---TTATGGCTTGAA--CGTTTAATTGCTTTCCATTTTTTTTTTTTGTTGTTGTTTTGTACATAGTTCTCCCGGAAATGAAAAC-ACCAAAACCCAACAGCGGTTACAGTAAAAGTGGGAGAGAAAGGGCAGCAGCTTCGATTGCCTG------AAGACAGAAGAGCGCCAAGAGG--------AGGGCCCATCCAGCTGATGGTGACCCTGGTGTTC----AAAACCTTTGATCTGGGGCAAGTAAACAT----GCACTCAATCTTGCA ...:x.......:.......:.......:..::..:..xx..x..:..:....:.::.....::.-.....:....--.....:.x.:::..---x...........--x....x........xx.--------------------.x.....::.xx:x.::x.x...x......-.::.x..:::.::.-:xx...x.:.x...:x::.x..x..x.:.:-----:.:.:.x.x....------....:.:....:x:x...x.:x--------.:..:x.x:.x..:x...-..:.x::..:.:.x.----x:.............x.....:.......----:.xx...:....... 65M1I10M2I14M3D12M2D17M20I30M1D14M1I30M5I13M6D22M8D18M1I15M4D29M4D15M 203/304 66.8% 334/94230402 0.0% 58/304 19.1% 109046699 81167856 +31063 chr4 + 190214555 139510884 139510883 139511863 980 TTTCTTCTCA---CATCTTAAAGCAAAGA-TATCTTTGTTTACATGCGAGAATAATATTCTATAATAA-TACCCTGGCCCTATGAGCCAGT---ACTTTATATTAGGACATAATAATAAAATGATGATATAGAAAGAACCAGAGAGACCTACACACTGC---------TATTGATGCAAAAAT-----CCATTTGGAAG---TTTTCTCTTGTAAAGGGTATCTAAGAAAGAGAATAGGGCT-----GAGGGGTGAAATGACTTTAGAAGTGGGCTCCTATTTACTAAGAAAAAAACCAAAGCCATTCTATTGCAAGATACAGATCAAAGGTT--AAAAGGCAAA-TTATACTACATTTAGAGAATA--AAGATGTAGTAATTGTCAACCCTTAATACGGCACATATGCAAG-TGTGCTAACACAATT-TGCACTGGCCATAGGAAAAAAGCACTATGGAAAAACCACTGACTAAAAATGACTGAAAAACCCCGTTTCCCTGTTTCAGTCTAATCATTTGGCATCTCCGAATGTGGTACAGATTTAGACTTGAACCACCAAAGAACATCACGCTGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTAGCTAATTTTAAATCTGGTATGAGTAATACAGTCAAACCTAGTTAGTATGCGAGAAAGTCGTTGCT-AACGCATGGTGAGAGGATGTGACGTCACAGCATGAGCAGTCCCTGGTTGTCCCATTGTCAG-ATAAACGTAGTGCATAGATCCAAGTTTCTATTCCAGGTCTCTGAACCCCAAAGCCAGGCCTTTCACTTTTGCTGGGTGGCCTGGAAGGCCTTCAGCTCCACCTGGTACCACTCAGGGGCTTCAGGCCCACTCTTCCCGGGGGGGCTGTGGTCATAGCCATAGGCAACGGTGAGCTCTTCATCGGCCTCCACTGCTCTCAGGGTGCGGATGCATTTGATGGGCCCAAAACGGGGGTGGACAAACCTAAACATCAAGATGCACAC chr4 + 94230402 30464953 30464952 30465935 30464953 30464952 30465935 983 TTTCCTTTCAGATCATCTTCATGCAAAGAACAGCTTCATTTGCGTGTCATAATCATAAATTAAATCAAATAAGCCAGCCGTAAAGGCCAGATAAATATTAGGCTTGGACATGTCGCTA------TACTACTTAGAGAGCCACAGAGACTGACACACAGCACTCTCACGTACACGTACAAGCCTTTCCACTAGTTAGAAAGGATTTTCTCCCGCAAAAGAGGATTCGTAGAAAGAACAACGTTCAGACAAGAGGAAAGGGGAGTTAAAACCCAGCCTCCTAGATGCTAATAAA----------CTGCTCTATTGCAAGATTCAGATCAAAGGTTTAAAAAGGCAAAATTATGCTACTATTAGAGAATATCAAAATATTACTGTTATCATCAC---AAGTGGCATATATGCAAAATGCAGTTGCACAATAATGCCTAGGCAGATAGAGAGCAACACTA-----AGTCTGCCAACTAAAAGTGAACGATATACCCATTTTAGTT--TCCTGTCTAGTCTTTTGGCATCTTTGCATATGGTGCAAAAGCAGA----AGCTACCAAAGAATATCACG---TCTCGTATAGAATATTAAATAATTTCTCCAGATAAGAC--TGGTGCGACGCTAGCTAATTTTAAATCTGCTATGAGTAACACAGTCAAACCTAGTTAGTATGCAAGAAACTTATCTCTTAACACAGAATGCAAAGTTATGATGCAACAGCATGAACAATCCCTGGTTGTCCAGTTTTCAGTACAAAGGTAGTGCATAGATCCAAGTTTCTTTTTGAGTTTGCTGAACTGAGGAGTC-GCCGCTTCACTTCTGCTGGGCAGCCTGGAAAGCTTTCAGTTCCAGCTGGTACCACTCGGGTGCTTCCGGCCCATTCTGCCCCACAGGGTTGTGATCGTATCCGTAGGCCACTGTCAATTCTTCGTCCTTCTCCACAGCCCTGATGGTACGGATACACTTGATCGGCCCGAACCGAGGGTGAACAAACCTAAATGCAAGAAGAAACAC ....:.:...---......x.x.......-:.x...::...:.:..:x.x...x...xx:..x.x:..-..xx.::...x..x::.....x---.:x...x::.x......:x::x..------.:x..:xx.:...:...x......:x......x..---------..:xx:.:...:xx.-----.:.x..:...:---.......::.:...:.:x:x:.x:x.:.:....:.:x.:.-----:..:..x:.::x..x..x.:.xx::.x......xx.:....x...----------.:::.............x.............--..........-....:....xx..........--..:..:.x::x:..:...x.x.---.x::....:........:-..::x.x:......x-...x:x...x:xx:..:.:x.:.....-----.:x.::.::.......:...x:..x.x....xx...xx:.--.:.x.....:..x..........::.x..:....:..:.xx:...----.:.:.........:......---...::.:.x:...::.x:.:...x:...:x::..:...--..x...:.x....................x.........:.......................:.....x.::.:x..-...:..x::..x:.:.x.:...:.:x.........:..:.............x:..x....-.:...x.......................x..:x..x.:x......:xx::..:.-.x.x:.......:.......::........:..:.....:....x............:..x.....x......:...x...x:x:...:....:..:..x..:.....x..x..x.::.....:..xx:......x..:..x.x...:.....:..:.....x.....:..x..:.....:...........:::x.::.x:x.... 10M3I16M1I38M1I22M3I24M6D35M9I15M5I11M3I40M5I45M10D31M2I10M1I21M2I22M3D18M1I15M1I27M5D40M2D45M4D20M3D38M2D78M1I61M1I55M1D207M 659/944 69.8% 983/94230402 0.0% 75/944 7.9% 109045931 81168624 +3249 chr4 + 190214555 139515167 139515166 139515303 137 CAAAAAAAAAAAAAAAAAAAAAAGGGTACATATCAATACCAATGATTTTTGAAACAAATGAATACCATAAATTGGTATCTGAAT-----TTCATATTTGGTTATTA--TTCAAGTAGTCTTCTCATTACCCCAAATAACTAAGA chr4 + 94230402 15178308 15178307 15178450 15178308 15178307 15178450 143 CAAAAAAAAAAAAAAAAAAAGAATGGGACTGAAGGAAACTGTTGATTTTCAAGCTAAGTAAAAGCCAAAGGCTAGAATCAGAATGAGGATCTATGTTTAATAAATACTTTCTGGCAGTTACAGTA-TACCTCTGGTAAATAAGA ....................:..x..x..xx.xx:.x..::x.......::.:x:..:.:..x:...x.:::.:.x...x....-----.::..:...::.x.x..--...x:.:...:x:xx:.-....:.x::...x..... 84M5I17M2I17M1D18M 87/136 64.0% 143/94230402 0.0% 8/136 5.9% 124336859 65877696 +3542 chr4 + 190214555 139517337 139517336 139517404 68 CGGTGGCGCATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....:...:.--....:.:............:........x.xx.x...x.:........::.:.. 12M2D54M 51/66 77.3% 66/94230402 0.0% 2/66 3.0% 63484138 NA +10856 chr4 + 190214555 139517878 139517877 139518044 167 TACTTACATATCGTAGATGCAGTTTGGAGTGAAGGAGTGATTTGCCTTGTGTCCCAAGGAGGCACAGTACTTGGATACGTGGTTATAGGGCTCAGGCACATCAATGACCGTTTCTTCATCAAGGGAGAGGGTGTTCCCATTAAGGGCCCAGTCCCTGCTGTCAACCT chr4 + 94230402 30466729 30466728 30466895 30466729 30466728 30466895 167 TACTTACGGGTCATAGATGCAGTTAGGAGTGAAAGAATGGTTGGCCTTATGCCCCAGTGAGGCACAGTACTTGGCGGCGTGGTTGTAGGGCTCCGGCACGTCTATGACTGTTTCATCGTCCAGGGATATTGTATTCCCATTGAGGGCCCAGTCTCTGCTGTCTACCT .......:x:..:...........x........:..:..:..x.....:..:....:x................xx:.......:........x.....:..x.....:.....x..:..x.....x.xx..:........:...........:........x.... 167M 136/167 81.4% 167/94230402 0.0% 0/167 0.0% 109051149 81163406 +8405 chr4 + 190214555 139520268 139520267 139520411 144 CCCACTCACCTCTTGGTGTGTAATTCGAACTCCATTATAAAAAGACATAACAGTATTAGGTCCCACAGCTACCTTTGAAAAAAGTCCTTCTCCAGCACTGGAAATAAGAGATTCAGCAACATAAACCCTAAATTGAAAAAAGAG chr4 + 94230402 30467133 30467132 30467276 30467133 30467132 30467276 144 CTCCTTTACCTCCTGGTGTGTAATTCTCACTCCATTGTAAAAGGACATAACGGTACGAGCTTCTGCCGCTACTTTTGAAAACAATCCTTCTCCAGCACTGGAAATGAGAGAGACATCAACATACACCCTACAAGGGGAAGAAAG .:.x:.:.....:.............xx........:.....:........:...:x..x.:.::.x.....:........x.:.....................:.....xx..x.......x......x.xx.::..:.:.. 144M 112/144 77.8% 144/94230402 0.0% 0/144 0.0% 109053135 81161420 +6044 chr4 + 190214555 139523341 139523340 139523451 111 AGGAGGAAA---------TTACCTTTCTGATTCATAAGGATCTGGAAGAAGAGCATTGGTAGAAATGCAAGATGAAGTCGACTTATCAAAGTGGTACACTGAATCT-----GAAAAGCAAACAAA chr4 + 94230402 30467930 30467929 30468054 30467930 30467929 30468054 125 AGGAAGAAAAAAACCAGCCTACCTCTCTGACTCATAAGGATCGGGAAGAAGAGCATTTGTCGAAATGCAGGATGAAGTAGATTTGTCAAAAGTGTACACCGGGCCTAGAAGGAGAAACCAACAAA ....:....---------:.....:.....:...........x..............x..x........:........x..:..:.....:xx......:.:::..-----..:..:.x...... 9M9I88M5I14M 90/111 81.1% 125/94230402 0.0% 14/111 12.6% 109055411 81159144 +3109 chr4 + 190214555 139526005 139526004 139526077 73 TGTTTATTTGCAACCAGAAGGTTTTTGTTGTTGTTGTTTGTTTTTGTTTGTTTGTTT----------------GTTTGTTTTGAGACAG chr4 + 94230402 85943120 85943119 85943203 85943120 85943119 85943203 84 TGTTTATTTTT-----GTGGGTTTTTTTTGGTGCTGTTTGTTTTTGTTTGTTTGTTTTGAGCAAGAAAAAATGATTTGTTTTGTAATAG .........x:-----.x:.......x...x..:.......................----------------:.........x:.:.. 11M5D41M16I16M 57/68 83.8% 84/94230402 0.0% 21/68 30.9% 53582885 NA +3196 chr4 + 190214555 139526006 139526005 139526070 65 GTTTATT-TGCAACCAGAAGGTTTTTGTTGTTGTTGTTTGTTTTTGTTTGTTTGTTTGTTTGTTTT chr4 + 94230402 29820388 29820387 29820449 29820388 29820387 29820449 62 GCTTATTCTGTAAC----AAATTTTTGTTGGTGGTGGTGGTTTTTTTTTGTTTGTTTGTTTGTTTT .:.....-..:...----.::.........x..x..x.x......x.................... 7M1I6M4D48M 52/61 85.2% 62/94230402 0.0% 5/61 8.2% 109705618 80508937 +3394 chr4 + 190214555 139526026 139526025 139526089 64 TTTTTGTTGTTGTTGTTTGTTTTTGTTTGTTTGTTTGTTTGTTTTGAGA-CAGAGTCTCTGTGTC chr4 + 94230402 32184182 32184181 32184246 32184182 32184181 32184246 65 TCTTTGTTGTTGTTGTTTGCTTTTGTTTGTTTGTTTCTTCTTTCTAAAATCACCGTGGTTGTGTC .:.................:................x..:x..:.:.:.-..xx..xx:...... 49M1I15M 51/64 79.7% 65/94230402 0.0% 1/64 1.6% 107341844 82872711 +13357 chr4 + 190214555 139529024 139529023 139529252 229 AACTTACTTCCAGGCATCAGTTCAAAGTGAGGCCTCCCTTCTTCAGTGGACATAAGGGTAGCCAGTTTGCCTTCTATCATCTCTCCATCAATAAATTTCCCATAAAGTGCGGTCCTCTCATCAGGGTACACATAGGCTATCTTCTCTCCAGTCATCTCCCCATCTTCATTTACTTCTCCTACAAGGCTTCCTCCATCCTGATGGGAGAAACCAAAAACCAGAAAATATT chr4 + 94230402 30469627 30469626 30469855 30469627 30469626 30469855 229 AACTTACTGCCTGGTACTACTTCAAACTGAGGTTTCCCATCCTCTAAGGATGTCAGGGTTGCCAGTTTTGCTTCTATCATTTCTCCATCTATGAACTTTCCGGAATATGCAGTCCTTCCATCAGGGTACACATAGGCTATCTTCTCTCCAGTCATCTCTCCTTCTTCATTCACTTCTCCTACAAGGCTGCCTCCATCCTGAAAGCATGGACAAAGAAGAGAAGAACACT ........x..x..:.::.x......x.....::....x..:..x:x...::.x.....x........xx..........:........x..:..:..:..:x..x:...:.....::........................................:..x........:.................x............x:.x.x::..x..:..xx::.:..:.:. 229M 178/229 77.7% 229/94230402 0.0% 0/229 0.0% 109059397 81155158 +3308 chr4 + 190214555 139531954 139531953 139532054 101 CGTAGTGGCCTGTGCCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCACGAGGCAGAGGTTGCAGTAAGCCGACATGGCACCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.....--..::.x..:.:.:...........::........x.xx:x...x............x:..x:xx:..:..:..------:.....:::... 8M2D73M6D12M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% 63498757 NA +15904 chr4 + 190214555 139533141 139533140 139533443 303 AGAGTGAACAGTCACACGGCTTACTGGGTAATATATCCAGCACACTCCATGACGAATGTTATCTTTATACTGCCCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTGGACCGTTCAGCTCTCCGTCTACATACGTGCCCTGGAGAACTCCCCCATCTTCGTAAGTGTAAACTCCCTGGCCCTGCAAGGCATCATCCACATAATACCCCTCCAGGGTGCTGTGAGGAAAGGAAAAACAAAAAGGAATAGTCAGACCATGACTTGACTCTCTTAGAAGAAAGGATCATATCCAAGG chr4 + 94230402 30470710 30470709 30470997 30470710 30470709 30470997 288 AGAGCGAGAGGTCA---GGCCTACCGGGTAATATATCCAACAAACTCCATGTCGGATGTTGTCCTTATACTGCCCTTTGAATATCAGTCGCCCATCACTGTCATACTCCTGGGCCGGGCCGTTCAGCTCTCCATCCACATACGTGCCGTGAAGCACCACTCCATCCTCGTACGTGTAGATTCCCTGGCCCTGCAGGGCATCATCAACGTAGTACCCTTCCAGGGTGCTG-GCAAAAAGAGAAAGGAAACAGCTGTAG-AAGACTAT---TCACCTCTGTAAGAAG-------CAAATCCAAAG ....:..:x:....---...:...:..............:..x........x..:.....:..:...........:.....x.......x......xx.......:........:..:..............:..:...........x..:..x..:x.:.....:.....x.....:.:..............:.........x..:..:.....:............-.x::....::...:x...x..xx:...-x....:..---.::x....x.x.....-------..x......:. 14M3D212M1D27M1D8M3D16M7D11M 231/288 80.2% 288/94230402 0.0% 15/288 5.2% 109062431 81152124 +3242 chr4 + 190214555 139536310 139536309 139536362 53 GGGAAAAAAAGTTATGATTTTTTTTCTTTTCTTTTTTCTTCATTGAAAACAAA chr4 + 94230402 54946612 54946611 54946664 54946612 54946611 54946664 53 GGGAAAAAAAGTGTTGAATTTTTTTCTTTTCTTTTTTTTCCCATAAAGGCAAA ............xx...x...................:.:.xx.:..::.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 84589698 NA +10268 chr4 + 190214555 139546893 139546892 139547076 184 AGAACAAAATAAAACTGTGAGTGCT-ACCTGCCATCAAAGAAGAAGAACTTCCCCCGTCCGTTCTTTTCTCCGTGAACAAAGTTCCCCTCAAATCTGTCTGTGGAGGAGTAGGTGACTGTGCAGAACCCGTGCGGTAATCCGTCATCGTCCAGGTGCCCTGGAGAAAGGGAACCACAAGGCAAAC chr4 + 94230402 30473863 30473862 30474042 30473863 30473862 30474042 180 AGAACACAGGAGAGCTG---GTGTTTACCTTCCATCAAAGAAGAAGAACTTGCCACGGCCATTCTTTTCTCCATGCACAAAGTTTCCCTCAAACCTGTCTGTGGACGAATAGGTGACCGTACAGAACCCATGTGGCAACCCATCGTCGTCTAGATGTCCTGGGAGAA--AATCCACATAACAAAC ......x.:x.:.:...---...:.-....x....................x..x..x..:...........:..x........:........:...........x..:........:..:........:..:..:..:..:..:.....:..:..:.....:::..--:.x.....x::..... 17M3D5M1I141M2D16M 143/179 79.9% 180/94230402 0.0% 6/179 3.4% 109073030 81141525 +5847 chr4 + 190214555 139555838 139555837 139556275 438 GGCGGGATGGAGCGGCCGTGCGTTTCCAGCGCCCC--------CGGCCTGGCGG-------AGCCCCATTCTCGGCCTGCG------CCCCGCCGCGCAGTGCGCGCTCCCGGCGGCGT-------GACCGTGGCTGTC-----GGGCC-CCCGCCCGAGCCGGGCAACCGGCCACCCGTGTAGGGGACAGTGGCGGCCGCGGGGCC------CGGCGCCGCGCTGTTCGCAGCCCGCCACTC--CTTCCGCGCTCCAGGCCCTCTGCGCCTCCTCCCCCGGCCCCGGAGAAATGCTTGTACCTTCCACCGCCTCCTCCACCATCTCGTCGTCGCTATCCATGGCGGCTG--------------GGGACACTGCCCAGCT--CGGGGCTGCGCG-------GCTGCC--------TCCCGTCCCTCTGGGTG------CTCCCGGCGGCTGAGCGAGCTCTGGGGCTCGCGAGTTTGGAG---GAGGAGGAGGAAGAGGAGGAGCAGTCGGGGCTGGCTC chr4 + 94230402 30476486 30476485 30476978 30476486 30476485 30476978 493 GGCACGGCGGCCCGGCAGAGCCCTccccgcgcccggaggagcgcggcccgccggcggccgcggccccccgTACCGCCCGCGACCGCTCCCGGTCCCGCGCCACGTGCTC--GGCGCCGTTGCATAAGCCCGCTGATGTCATgcggggccgcccgcccgcccgcagccccgagccccc---------gcccgcagc--ccgcgggaccgagcggcggagccgggccgggcccgtcccgccccgcggATACCGAGCGGGGAGACCCTCCCGCGTCCCGCCCCGG------------GCTGACACCTTCCACGGTCTCCTCCAGCGTCTCCTCGTCGCTGTCCATGGCGGCGGCGACGGCGACGGGCGGGGCGCAGCCGCGATAccgcggccgggcgcgcgcgcgccgccccgcctatccccgccccgccgagggcgcggcctcgcggagg--gggcgtggcctggggcgggagggggcgTGGCTTGGGCAGGAGGCGGGGCGGCAGCAGCGGGAGCCGCCCC ...:x.::..xx....x.x..x:.:..x......x--------.....:.x...-------:.....x:x:x.x...:...------...x.:.x...:x::..:....--....x...-------.x...:x.x....-----.....-........xx.xx:..xx.x:...x..---------.x.x.::..--.......:..------...x....x..:.xx.x.:x......x.x.--x.x...x..xxx::.x..:::x...x...:x......------------...x::.........x.:........x.:....x........:...........x.--------------...:.:.x...xx.x.--..x...:.x...-------..:...--------:....:...x.:.:.x.------...x...x..--.:...x.x:.......xx.x.:.xx:.x:.---.:.x......x:.:.x:.x.....:x..:..:.x.:. 35M8I11M7I20M6I22M2D8M7I13M5I5M1I27M9D9M2D10M6I30M2I37M12D56M14I16M2I12M7I6M8I17M6I10M2D30M3I37M 279/411 67.9% 493/94230402 0.0% 109/411 26.5% 109079352 81135203 +3691 chr4 + 190214555 139561338 139561337 139561439 102 AAAATTACAAAAATACAAAAACTGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGAAGGAGAATCACTTGAACCTGGGAGGCGGAGGCTGCA chr4 + 94230402 76033177 76033176 76033276 76033177 76033176 76033276 100 AATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x:.:.::...:x.::.x.xx::........:.--......:...........::........xxxx.x...x..........::.:..x:xx:.....:. 34M2D66M 67/100 67.0% 100/94230402 0.0% 2/100 2.0% 63528161 NA +3801 chr4 + 190214555 139565791 139565790 139565851 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........x.xx:x...x.:...........:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 63532587 NA +3088 chr4 + 190214555 139568228 139568227 139568278 51 ATCCCAGATTGTTTTTTTGTTTTGTTTTGTTTTGTGTGTTTTTTTTTTAAA chr4 + 94230402 72938546 72938545 72938596 72938546 72938545 72938596 51 ATGCTCGGTTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTGCATAAA ..x.:x.:.........................x...x......x:x.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 66629682 NA +3403 chr4 + 190214555 139572637 139572636 139572714 78 ACATCTCCCAAGCTCGCTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCTTTCTTTCCT-TCCTTCTTTCTTTCTC chr4 + 94230402 6626797 6626796 6626875 6626797 6626796 6626875 79 ATATTTATCAAACTTACTGTTTCTTCATCTTTCCCTGTCTTTCATACCTCTCTTTCTTTCCTCTGCCTCTTTTTTTCCC .:..:.x:...:..::..x......:x.:.::::..x......x.x...:............-.x.:.....:....:. 62M1I16M 55/78 70.5% 79/94230402 0.0% 1/78 1.3% 132945840 57268715 +3179 chr4 + 190214555 139572664 139572663 139572714 51 TTTCCTTCTTTCTTTCCTTCCTTTCTTTCTTTCCTTCCTTCTTTCTTTCTC chr4 + 94230402 11806868 11806867 11806918 11806868 11806867 11806918 51 TTATCTTTTGTCATTCCTTCTTTTTTTTTTTTCCCTCCTTCTTTATTTCTC ..x:...:.x..x.......:...:...:.....:.........x...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 127765796 62448759 +3261 chr4 + 190214555 139578860 139578859 139578942 83 TGTCTTTCTTTCTTCCTTTCTTTCATGCCCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTT chr4 + 94230402 72383369 72383368 72383451 72383369 72383368 72383451 83 TATCCCTCTCTCTTTTTCCCTTTCATCCCTTTCCTCTCCTTTCTCTGTGGTGGGTTTTTTTTTTTTTTTGTGCttttatattt .:..::...:....::.::.......x..:..:..:.:....:...x.xx.xxx..:...:........x.x::...x.x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 67195491 NA +3193 chr4 + 190214555 139578864 139578863 139578949 86 TTTCTTTCTTCCTTTCTTTCATGCCCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCT chr4 + 94230402 61949704 61949703 61949789 61949704 61949703 61949789 86 TTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTT .......xxx.::.x..x::....:.:..::x.x..::x..:..x..::..:.xx.x:..:...................:...:. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 77629160 NA +3654 chr4 + 190214555 139578867 139578866 139578989 123 CTTTCTTCCTTTCTTTCATGCCCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.....:..:..:x:.x:x...::.:.:......:.:x..::.:.x....xx.:...x::..xxx:....x:.:....x.xx.:..::.:::.:..:.:.:...:....x...:.x... 123M 73/123 59.3% 123/94230402 0.0% 0/123 0.0% 75881750 NA +3869 chr4 + 190214555 139578892 139578891 139579036 145 TCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTT--CTTTTTTCTTTCTCTTTTTT------CTTTCTCTCTTTCTCCTTCCTTCG--------TTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTT chr4 + 94230402 50176266 50176265 50176426 50176266 50176265 50176426 161 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .:..:.x.:.:x..x:::.:.......:....x.::x.::x....--.x..x........x..:...------x...:.x....::.:...:....:--------:.:.:.x..:.:..x.:.:...::..........:.:.x....::x:x.x..:... 45M2I20M6I24M8I56M 93/145 64.1% 161/94230402 0.0% 16/145 11.0% 89402626 NA +3556 chr4 + 190214555 139578902 139578901 139579096 195 TTCTTTCTTTCTTTCTTTCTTTTTTT----TCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTC---------------------------------TCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 21408712 21408711 21408948 21408712 21408711 21408948 237 TTCTTTCTACATATTTTCCTTTGTCACAAATCTTTCTTTCAAGTGCCTTTCTCTTACTAACTCCAAGAGCAGCAATATCAAAATCATGAAAAGAACTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTT-TTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC ........x:x.x.:..:....x.:x----..........xxx.x:.........x:.xx:.:.---------------------------------.:.x...::.:..::x::.x....:.:.x....x.:..-........xxx..xx...:::.:...:::.::x.xxx..x..........:.........:::...xx:...x:------...x::......::.x:..... 26M4I34M33I38M1D74M6I22M 123/194 63.4% 237/94230402 0.0% 44/194 22.7% 118170190 72044365 +3442 chr4 + 190214555 139578905 139578904 139579181 277 TTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCT--TTCTTTCCTT-----------------TCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TTCTTTCTTTCTTTCTTCCTTTCAGGATCTCA----------TTCTGTTGCTCAGCCTGAGTGTGGTGCGACCCTAGCTCA chr4 + 94230402 67728277 67728276 67728590 67728277 67728276 67728590 314 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCTGGAGCTTCACCCATGAAAGTTGGATTGCAAAGGCTGGGTGCTGCTTTACTCCAGTTCA .....x:..x....:....xx:......x..::..:x.x...x:x.:.:...:...::.:..x:x:.....::x::......::.x:::x::.x.:x:.x:.:..x::x.....:::x...:::x.:.:xx......:..--.:..:...x.-----------------..:.:.:..--..:::...:....x.:.x:::::..:.xxx:.x..:...xx:.:.:.------...:..x.x:..:.x.x...::::.::::...----------..xx:....xx..x...:...:x.:x:x..:.:..:... 140M2I10M17I9M2I47M6I32M10I39M 152/277 54.9% 314/94230402 0.0% 37/277 13.4% 71850628 NA +3451 chr4 + 190214555 139578909 139578908 139579131 223 TTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT------------TTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTTCTTTCTTTCTTTCTTCCTT chr4 + 94230402 19215306 19215305 19215543 19215306 19215305 19215543 238 TCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCG--CAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTT .:...x:...:..:.:.x..xx.xxx..:..x...:x..:....x..xx..x:xxx:x...:x...:.x..x...xx.x.x:.:.:.:.xx.x::.x--.xx:.:.:::..::.:.:.:.::.:.:...:....xx....xx.xx......x..::...x......xxx....------------......:.x.:.:.:..x.:x..:..-----...:....xx:..:.....x.... 97M2D74M12I26M5I24M 130/221 58.8% 238/94230402 0.0% 19/221 8.6% 120363603 69850952 +3600 chr4 + 190214555 139578922 139578921 139579026 105 TTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCC-TTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTC chr4 + 94230402 12052500 12052499 12052605 12052500 12052499 12052605 106 TTTTTTTCTGCCTTTCTATTTCCTTTCTCTTTTTTTTCCCCTTGTTTCTCTAAGCCCTGGTTTCTTTATCCACCCTAGTTCTTGTGCTGAGCTGTTTCCTTTTCTC .........x:......x...:.............:.::.::.x......:-xx..:.x......:.x..:x::..xx.::..x.x::xxx..x....:..:.... 51M1I54M 70/105 66.7% 106/94230402 0.0% 1/105 1.0% 127526422 62688133 +3302 chr4 + 190214555 139578959 139578958 139579136 178 TTCTCT-CTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTT--------------TCTTTCTTTCTCTTTCT------TTCTCTCT-----------CTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTCCTTTCAGG chr4 + 94230402 19215305 19215304 19215519 19215305 19215304 19215519 215 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGG ......-.:...::..::x..x..xxx.:...x....x.......--------------.:::x.....x::..:.------.....:..-----------.:.:.:.:.:.::::.::::...::...:...xx....-----......x..::...x......xxx....x.x..::::xx:.......:x..::..:.x:.x......x... 6M1I38M14I17M6I8M11I38M5I71M 113/178 63.5% 215/94230402 0.0% 37/178 20.8% 120363654 69850901 +3672 chr4 + 190214555 139578967 139578966 139579082 116 TTCTCCTTCCTTCGTTTCTCTTTCTTT-----TCTTTTCTTTCTTTCTTTCTCTT-----TCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874866 48874865 48874992 48874866 48874865 48874992 127 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .....::.:....::x.x...:.:...-----.....x:....:..:.x....:.-----.......:.x...x.:x...:...:....x:....:..-....::xx.x...x.x...:.:.::... 27M5I23M5I38M1I28M 80/116 69.0% 127/94230402 0.0% 11/116 9.5% 90704101 NA +3500 chr4 + 190214555 139578978 139578977 139579106 129 TCGTTTCTCT-TTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTT--TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874862 48874861 48874992 48874862 48874861 48874992 131 TCGATTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTT-TATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ...x......-.....:x.x.x...:.:...x.xxx.....x...::..:.-.x....:.x...x........--..:x..x:...:....:.:x..:.:.:.x....::xx.x...x.x...:.:.::... 10M1I40M1D21M2I57M 86/128 67.2% 131/94230402 0.0% 4/128 3.1% 90704116 NA +3230 chr4 + 190214555 139578978 139578977 139579076 99 TCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895604 32895603 32895702 32895604 32895603 32895702 99 TCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ..x.:.:....:..x..:...:..x..x....:.x.x...::.x..xx:...x..xx:x...::..x:::..::..x:.x......x.....:...... 99M 63/99 63.6% 99/94230402 0.0% 0/99 0.0% 106683374 83531181 +3495 chr4 + 190214555 139578982 139578981 139579101 120 TTCTCTTTCTTTT-CTTTTCTTTCT---TTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTC-------------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 13100826 13100825 13100962 13100826 13100825 13100962 137 TTCTCTCTCCTCTGCTTTTATTTTTGGTTTGTTTTGATTTATTACTCTTAATTATTCTGTATTTTCTTGCATTCCTTTTAGTAAATCAGTTTTTCCTATCTCAATTATTTTTTTTTCCTCTTTCTTTCCCCCTTTCT ......:..:.:.-.....x...:.---..x...:xx...x..x....:xx.:x:...x.x.......x.x.......:-------------..:..x...:xx..x:...:...:::..........:::...... 13M1I11M3I51M13I45M 84/120 70.0% 137/94230402 0.0% 17/120 14.2% 126478156 63736399 +3759 chr4 + 190214555 139578998 139578997 139579144 147 TTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTCCTTTCAGGATCTCATT chr4 + 94230402 8009577 8009576 8009723 8009577 8009576 8009723 147 TTCTCTTTTTTTTTCTCTTTCTTAACCTATTGTAACCCCTTTTTCTGTTATTCCCTTCATTACCTCCTTCATTGTATTCTTCAGTTAAACCCTTTCTACTATAAGAGTTTCTCATTTCTCATCCTTTATTCCTTCCATGCTCTTATT ....:.:...:............xx:..x.:x:xx:.::.:...::x..x..:....:x..x.:.:...:x..x:x.....:xx..xxx:.:..::.x..x.xxxxx.....:x.:.:..x.:....x......:..x.x...:... 147M 88/147 59.9% 147/94230402 0.0% 0/147 0.0% 131569421 58645134 +3190 chr4 + 190214555 139579012 139579011 139579097 86 CTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCC--CTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.......:::.x..:..x..:.:...:..:--....xx:.x..x.:.........:...::...x.....x..xx:.x..... 33M2D51M 58/84 69.0% 84/94230402 0.0% 2/84 2.4% 82206986 NA +3155 chr4 + 190214555 139579018 139579017 139579101 84 CTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:...:.:::.x..::.x.::..:....::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 82206992 NA +3018 chr4 + 190214555 139583186 139583185 139583262 77 GGTCTTAGGGTGAACCTTTTCTTTTTATTTTTCTTTCTTTTTTTTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTT chr4 + 94230402 83244970 83244969 83245046 83244970 83244969 83245046 77 GATTTTATGGGGAACCCTCCCTCCCTTTTTTTTTTCCTATTTTTTTTTCATTTTCTCTGTCTCCTGTCGTGTTTTCT .:.:...x..x.....:.::..:::.x.....:..:..x..........x...::.:.x.:.::.x..x.x.:..:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 56338216 NA +3367 chr4 + 190214555 139583199 139583198 139583274 76 ACCTTTTCTTTTTATTTTTCTTTCTTTTTTTTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 58577643 58577642 58577718 58577643 58577642 58577718 76 ACCTAATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTT ....xx.......x...::.:x..x.x....:x..:x:...:x.x..........:...:......x...x..... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 81005556 NA +3300 chr4 + 190214555 139584634 139584633 139584706 73 TGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........::::........x.xx.x:..x.:...........:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 63551429 NA +3595 chr4 + 190214555 139608266 139608265 139608348 83 CATGGTGGCATGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..:..x....:.:...........::........x.xx.x...x.::........:.:..x.xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 63575069 NA +3218 chr4 + 190214555 139611002 139611001 139611044 43 ACATCAGTTTGTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 + 94230402 17384402 17384401 17384444 17384402 17384401 17384444 43 ACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ....:x:..x..................:.............. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 122226600 67987955 +3297 chr4 + 190214555 139611011 139611010 139611062 52 TGTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTCAGACAGGGTCTCAC chr4 + 94230402 11184301 11184300 11184352 11184301 11184300 11184352 52 TGTCTCTCTCTCTCTCTCTCTTATTTACTTTTTTCTTCATGTGGGGTTTAAC ......................x...x:......:....x:::....:.x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 128426710 61787845 +3121 chr4 + 190214555 139611015 139611014 139611051 37 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTCAGA chr4 + 94230402 17384413 17384412 17384449 17384413 17384412 17384449 37 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAGA ................................x:... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 122226602 67987953 +3154 chr4 + 190214555 139614060 139614059 139614130 71 ACATATATATACACATATATACACATATATACACACATATATACATATATACACATATATACATATATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...:.:....x.....::.x......::.....x.x....:..:..x.:.:::::.....:...::.::.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 117013862 73200693 +3032 chr4 + 190214555 139614114 139614113 139614175 62 ATATATACATATATATACACACACATATATATACATATATATACACACACACACATATATAT chr4 + 94230402 58675381 58675380 58675442 58675381 58675380 58675442 62 ATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATAT ..x.x....:..x.x.::.::..:.......:..x:....:.:.........x..x...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 80938733 NA +3295 chr4 + 190214555 139614115 139614114 139614318 204 TATATACATATATATACACACACATATATATACATATATATACACACACACACATATATATATTTTTTTTTGAGATGGAATCTCACTTTGTCACCCAGGCTTGAGTGCAGTGGTGCCATCTCAG-----CTCA---CTGCAACCTCCGCCTTC--------TGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAG--TAGCTGGGATTACAGACGAGCAC chr4 + 94230402 70600711 70600710 70600911 70600711 70600710 70600911 201 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGTTTTTT----AAAAGGA-----------------AGTCTTGGAGCCACTGGCTTCATCCCAGGAGCTATCAATGCTGCCAGCTTCGTCTTTGCTTAAAGTAGGAGCAGTGGGATTTCTTCCTTTTGGCTGCTGGGCTCAGCTGGGGCTGTGAGCGCTCAC .:.:.:.:..x:.x:.:::....x....:...........x...::........x:.:.:.:......----.:.x...-----------------..x....::xx..x...:x:....:...-----x...---....x.x..:..:...:--------.:..xx..:xx.:x.:..:.x.:.:x.x..x...:.--:.......::.:::::..xx... 68M4D7M17D28M5I4M3I17M8I36M2I23M 117/183 63.9% 201/94230402 0.0% 39/183 21.3% 69013404 NA +3143 chr4 + 190214555 139614120 139614119 139614172 53 ACATATATATACACACACATATATATACATATATATACACACACACACATATA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .::.:.:...:.........x...:x......:..:.....:.......:.:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 116366398 73848157 +6255 chr4 + 190214555 139628374 139628373 139628688 315 ACGTGAGCCATTGCTGCTGAAAAGAAACCTTTGAGCTGCTCGACTGTTTAACTAATTAATGCCT-TGCTCCCCTAAGGTTAGAAAG----AAAAGGAGGAGGAAGAATTTGTGGGTGATACACCACTTTGGGTCCATAATATACTTTCAAAGACGAATGCAAGGTGTAC--TCACTGGGTACTGTTCAAATCTCTTGTGGAATCTTCACTAATCCCTGGCGTTCGGCGGATCACAGCGAGGCCTCTGGC-TGCAGAGCCGATCTCAATGGGTCGATAGCAACAGGAAAGACTCTAAAGCTTCTTTTGATCCTAGCATAAATCA chr4 + 94230402 30486826 30486825 30487122 30486826 30486825 30487122 297 ACGTGAGC----ATGGCTGAAAAGAATCCCTGGAACTG---AAGTCGTGCACTAATTAAAATAGATATTTCTCCCAGGTAAGCAAGTTAAAATAGCAAGTACAAAGCATTGTCACCGATCTAC----------------TAGGCGTTGTGAGGGAGATGAGAGACGTACAACCAACGTGTCCT---CAAATCTCTTGCTGAAGCTCCTCTAATCCCCTGCATTCCACATATCAGAGCTATCATGCCGGCCTGGGGATCTGCTTCCAATTGGTCAATAGCAACAGGAAAGTCTTTAAACCTCCTTTTGATCCAGACACAAGTCA ........----::x...........x..:.x..:...---:.x.xx.xx.........x::xx-.::.:.:.:x....x..x...----..x..x.:.x:x..::xx....x:x:...x:..----------------..x:.x..xx:..:x::...x:..::....--:..x:.x..x..---...........:x...x..:.x........:x..:...x:.:x....x...x.xxx:x.:...-..x:..x.:.x.::....x....:...............x..:....x..:..........x::..:..:... 8M4D26M3D23M1I21M4I33M16D30M2I12M3D63M1I73M 190/289 65.7% 297/94230402 0.0% 34/289 11.8% 109141548 81073007 +3453 chr4 + 190214555 139657596 139657595 139657694 99 GGGAGGGGGAGGAAGGGGAGGAGAAGGAGGGGAGGGAGAGGCGGA------GAAAGGAAAGGAAGAAGTGGAAGAGGAAGAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 11181399 11181398 11181503 11181399 11181398 11181503 105 GGGTGCGGATGGATGGAGAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAA ...x.x..:x...x..:..:.x.xx.:......x......:x...------..x..:::x..:.:.x.::...:.:...:.::.....x.........:..x:.. 45M6I54M 66/99 66.7% 105/94230402 0.0% 6/99 6.1% 128476197 61738358 +3014 chr4 + 190214555 139657656 139657655 139657723 68 AGTGGAAGAGGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 59418545 59418544 59418612 59418545 59418544 59418612 68 AGTGAAAGAGGAGGATGGGAAAGTGATCAGAAATAAGAAAGGAATAAAAAAAAAAAGAAACCAAAAAA ....:.......:..x.::.:.:x..xx::..:x.......:..x...:...:.......xx..:... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 80239111 NA +3018 chr4 + 190214555 139657667 139657666 139657742 76 AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .:...:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x.:..:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 98545489 91669066 +3464 chr4 + 190214555 139665273 139665272 139665355 83 CACAGTGACTTGTGGCTGTAGTTCTAGCTACTTGGGAGGCTGAGGCAGGAGGATTACTTAAGCCCAAGAGTTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:--..::xx........:.........::........x.xx.x.:.x:....:.:....::..:.xx:.....:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 63632076 NA +16597 chr4 + 190214555 139685193 139685192 139685428 236 GAGATTGTTTGGAGGTTCCAGCAGGGGAGCATAGCTACTCATATACCCTTGACCGAAAACTGGT-CCTCCTCTATGGAGGATGGTCGTCCTCTTTGACTGAGCATGCAGCTTTGGGAGGGACGCACATGGAGTGGGGAGGGAGGAAGGGAACACCCGCCTAGCCAGCCAGATCAGCCGAATCAACCCTGGCAATTGATGGGGTGACAGATGTTGCAGCCAGATTACCCTCACTTCCT chr4 + 94230402 24950307 24950306 24950542 24950307 24950306 24950542 236 GAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTAC-CGTATACCCTTGACTGATGAACGGTACCGTCTCTATCGGGGAAGGTCGTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCCt ...x..............:...........::......-.:............:..x:.x:...-..x:......x.:...x............:...::...:........:...................:..x...:........::......:....................:............::..::................:..........::.......x.... 38M1D25M1I172M 200/235 85.1% 236/94230402 0.0% 2/235 0.9% 114734886 75479669 +4430 chr4 + 190214555 139695155 139695154 139695271 117 CTTTTC--TCATAAAATAAC-CTATGTCTTTATTTTTTTCTGCAGACAAAACTGTGTGGAGTTTTATCCTATATTCATAATTACATTGTGGATGGCTGGGTGGTATTTCAACCAAGGTAA chr4 + 94230402 30493840 30493839 30493957 30493840 30493839 30493957 118 CTTTTCCTTTCCAGAATAACATTATGTCA--AATTTAACCCACAGACAAAACTGTGCAGAGTTTTACCCTATGTTCCAGACTGTCCTCTGGATCGCAGGATGGTTTTGCAATCAAGGTAA ......--.:x:.:......-:......x--.x...xx:.::..............::........:.....:...xx:.:.::x:.x.....x..x..:....x..x...:........ 6M2I12M1I8M2D89M 84/115 73.0% 118/94230402 0.0% 5/115 4.3% 109201315 81013240 +4095 chr4 + 190214555 139695486 139695485 139695564 79 GTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.:...........::........x.xx.x...x.............:..x.xx:.....:.. 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 63662285 NA +4104 chr4 + 190214555 139699900 139699899 139699986 87 GGCACACATGTAGTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGAGCTCTCAAGCCCAAGAGTTTCAGGCTGCAGTGAATCATGACA chr4 + 94230402 76033203 76033202 76033289 76033203 76033202 76033289 87 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCA ..::...:......:...........::........x:xx.x.:...x..::.:....::..:..::.....:..x:x..x...x.. 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 63666697 NA +5832 chr4 + 190214555 139703976 139703975 139704132 157 GTCCAGTTTGTCAC----TTTTCTCCCTCATGTCCACTCTGCAGGATCACCGGTTTCCGACTGAGTCTGGGGATTTTGGCCTTGTTGACCCTCCTAGGTGCCCTGGGAATTGCAAACAGCTTTCTGGATGAATATCTGGACCTCAATATTGCCAAGAAACT chr4 + 94230402 30500980 30500979 30501135 30500980 30500979 30501135 156 GTACAGCTTGTAACAGTATTTTCTCCTTT-----CAAATTCTAGGTTAACGGGTTTTTATTTGAGTCTGATAGTTCTGGCTTGCTTGACAATCCTGGGTGCAGCTGGGATTGTTAACAGCTTTATGGATGAATACCTGGGCTTCAACGTTGGGAAGAAATT ..x...:....x..----........:.:-----..xx:.x:...x.x..x.....:::x:........:x::..:....:.xx.....xx....:.....xx:x..:....:x.........x..........:....:.:....::...xx......:. 14M4I11M5D127M 107/152 70.4% 156/94230402 0.0% 9/152 5.9% 109202996 81011559 +32097 chr4 + 190214555 139716766 139716765 139717251 486 TCTTTTATTTTTGTTTTTGTTTTCTTTAAAAGTGGTATGTCAACATCA----------CTTCATTTCTACATTT-CAGCGTTCTGTACATTTCTTAAAAGGAAATAAGCAATGCTCAATGTACAAAGTAAAAACAGAAAACTAGAAAAATCTGAATAAAATGGAGCAAGTTGCCAGAGGTCATACAGTACAAATTAGTAATTAGATGTCATCTGAAGTGCAATACCACTGCTGTGATGATGAGTTAAGGAATGAAATAAAAATACTCTATTTTAAACAAACAG----TATATATATATTTATATGTATATTTTTTACAGATAGTAGACCCAGTGATATCTGCAGTATTGTAAAAACTTATGTACAAATAAC-------TTTTTTTAGACATTACATATACATCAGCACCGTAGT-------------------AAAAACAAAACCAAAACAAAACCAC---CATATTAAAATCTA--CCTATTAGTTGGTCCCAGTACTGAGCATTTGGAGGAAGCTTTTAAAAGATAATGG chr4 + 94230402 30503337 30503336 30503867 30503337 30503336 30503867 531 tcttttttcttttttttttttttctttAAAAGTGGTATGTTAACATCAGCTTTTTTTTTTTTTTTTCTACATTTTCAAAGCTCTGTACAGGTCTTAAAAGGAAATAAGCAATGCTTAATGTACAAAGTAAAAACAGAAAACTAGAAAAATCTGAATAAAATGGAGCAAGTTGCCATCAGGGATACAGTACAAATTAGTAATCAGACATCATCTGAAGTGCAATACCACTGCAGTAAGGATGAGTTAAGGAATGAAATAAAAATACTCTATTTTAAACAAACAGtatatatatatatatttatatgtatatatTTTACAGATAGTAGACCCAGTGATATCTGTAGAATCGTAAAAACatatttacaaataactttttttttttttttaatattaCATATACATCAGCACCATAGTAAGGAGGGaaaaaaaaaaaaaaaaaaaaaaaaGGACAAAACCTCAGATCTATTAAAATCTATGTCTATTA-TTGGTCCCAGTACAGAGTATTTGGAGGAAGCTTTGCAAAGACAACAG ......x.:...x.....x.....................:.......----------:..:x...........-..:x.:........xx........................:...........................................................xx:.xx....................:...::........................x..:.x..............................................----.......................x..............................:..x..:........x...x..........-------.......x:.:....................:....-------------------.....x....xx.::........x.---:x............--:......-.............x...:................xx.....:..::. 48M10I16M1I208M4I84M7I36M19I25M3I14M2I7M1D47M 434/485 89.5% 531/94230402 0.0% 47/485 9.7% 109213429 81001126 +65229 chr4 + 190214555 139719227 139719226 139721701 2475 CAAAAAAACAAAAAAC-----------AAGGATGGGTCA-ACATCCTGTT-TCTTTTTCACTTTTT-AAGCTTTAACCACTCGAGTTGTGGATCTTGGGGCCTCTCTTGATTAGGGGTTACCAAACAATTCATCAAGCTCCTGCATCCACTCGTCCCCTGGCCCGCCTTTGATGATGGAGTCCACAAGGTCTGCACCGTCCGGGAGGCCAGGGAAGGAACCCCCAGCTCCGTCGCCACTGTAATTGTATGACACGTCCTGAGGGGCATTCCGCTCATAGGCTTGGCTCTGGCTGCTTGGAGCAAAGCTGCCACTGGGTATCTGCTGCTGTGCTGGGGGCTGGCTGAACGCTGGCATGCCTGGGACTCCCTGGCTCAGGCCAGACATGACCATTGGCCTCGCCTGGCTGGTGCCTTGCTGCCCCGGGAGCGATGGCATCATCTGCCGACCCATGGCAGCTGGGTTGAGGGTCCTCACTGTGCCCGTGTTAGCATCCACGACTGACTGGCTCAGTCCCTGTGGGAAGTGCTGCTTGGTCAGTCTCGGCTGCCCAGCTTGAAGAGGGTAGCTGGCGCCATTGTTGAATGGTCCCAATTCTCCACTAGTCCTCCCAGGCATGCCCTGCAAGCTCCTCTGTTGCCAGCTTTGTGCTCCTTGCTGGACTGTTCCCATAAGGCTCTGCAGCCTTGGAGGGGCTTGGGGCCTAGGCAAGGCCTGGCCTACTGGCCCTTTCATCTGTGGATGTTGCTGGGTAATGGCTGAGTTCACCAGCATGCTCTGACCAAAGCCACTCACCATTCCAACCCCCTGCCCAGAGGCAGGTTGCCTCGGTCCCTGGGCTTGGTTATGTGTGATGCTCATGCCACTTTGGTTTGGATGCTGCAACATTTGGGTCATGCCTGTGCTCATATTGTACATTCCTGGTTGGCTGGTAGGCGTGGTGCTATAAGGGGCCAGTCCCATCTCCGACTGCGCAGCTGCGGTGGCCATCGTCCCAGGGTTCTGGGAGGGTCCTATTCCCATCATGCCTGCGTTCTGTGCCATCAGCCGTGACGTTCGCATGCTCTGGAGGGCTGCTTGGCTTCTTACGGCTGCTATATCCTGGGGAGAACCTGC---------------AGTGAAAAAGAGGACACATACCACTCACTCTTCTCCATAAGCAA------TATACTGCAACAAGA---TGTTGGAATTTTCTTTGGGAATGACA---AAATTCCTTTATATGAAAGGATCTACTCTGATAATAAATCTGTAACAAAAATGATTATTTTTCTGATTATAGCATATGCTGATTGTGAAAATTTTGAAAGTGTTAAAAAATACAGAGACAAAAATTAAAGTCACCTGAAATCCCACTATCC---AGAGATGATCATTCCTATTCTTTTATTTGTATATAAATAGACACCCACAAAAATTGGGATCGTACTGTGCATGTGTTTTTGTAGCTGACTTTTCCACTAAACAGATCCTGATGTAATTCTTGTTTATACTTCAGAAGCAAATTATTTCGTACTCTTATAGGTATGACATCATCCTCAACCAATAAGATACTATTTTCTTTGGAGGTGAGAGAGAATCCACCTCTGGG-GCTAAATTAGAAAGAAATGGCTGATCACTTTGTATTTTCTATTTGTGAAGTGGAACATGGTTCAGTAGAGAATACTATCAATAAAGACCATTAGACTAATTTCCCTTAAGACTTG-AGTAGGATTTGAGAGGTT-AAAGGCCACTGCTT---CTGCTAAGCAGCT----ATTTTGACAGATAGGACATTTTTC-------GGATCCAC-TCTGTAGATTTCAACATGCTCCAGATTCTCTGAATC---------ATAACTTGTCATTGCAAAC-TGGCCAGCTTCCTGAGCTAGAAAAAGAAATCATCCTGCTACGT-GCGACT-TGGCCATAAACTTTACGC------------------------------------------ATTTCTACAGC------------AAAGTCCATTCCTTCAAATCGGCAACGACT----------------ATTTCTCTCAGCA-----------------------------------AATTGCTAACACAATTTTAATAATGCTGTTTAA-AAGGTGGCCAGAG--------------------------TGTCCA-----TACCAAGTCATTCA----ACCTTAATTAGGC----------------------ATTTGAGT----------GAGTCCTTCTTTACATGTTACCAGGAAATTTCCAAA--CAGCCAAGGGAATGGAAATGTCGCCAGTAGAACACCAGTCAACGTTGCAAAGGTCTAGGAGGTACACAAAAACGGATTTTTCTATGTCCCTGCTAATGATTGAGTCTATGAGAAGAAGAAAAATAGTTTTTTTCC----TGGACATTTAAAGAAGGTGCAGCATGGGAGCCAGTCAATATTCTAAGCAAATTTGATCCCACCT-GGAACTGTGATGAGAAACCAGATGAGAATAGTCTAACCTTGTTAAACCTGGCACCCTGGTAGATAACTGAAGCATGTTTTTGTCTTCC---------TGATGTGGCTATTGATTTCTGGGCTGCAAATATGTCTCCATAGTTTCTTCCTTTCTTTAAGAAAGAAAATTACTGGAATTTTGATTATGTCTCAAGTTT-TTGTGGCTTGAGATCAATATCATACTGCATTGAA chr4 + 94230402 30505561 30505560 30508105 30505561 30505560 30508105 2545 caaacaaacaaaAAACCCCAACGATCCGAGGATGGGGAGCACATCCAACCCTCTCTTTGATTTTTTCGAACGTTAACAACCCAAACTCCAGACTATACAAGCCC-ATTCACTGGGGGTTCCCGAACAACTCATCGAGTTCCTGTATCCACTCATCCCCTGGTCCGCTCTTAATGATGGAGTCCACGAGGTCTGCGCCCTCTGCTAAACCGGAGAACGAGCCCCCAGCTCCTTCGTTGCTGTAGCTGTAAGGTATGTCCTGAGTGGGATTCCTCTCGTAGGCCTGGCCTTGGCTGCTCGGAGCAAAGCTACCACCTGGCATCTGCTGC---GTGGGAGGCTGGCTAAAACCAGACATCGTGGGGACCCCCTGGCTTATTGCAGGCATCACCATCGGCCTGGCCTGGCCGGTTCCCTGCTGCCCGGGCAGCGGCTGCAGCAGCTGTCTCCCCATGGC---CGGGTTCAGGGCTCTCACCGTTCC---GCTCGTGTCCACAACCGTCTGATTAAGTCCCTGTGGGAAATGCTGCTTGGACAGCCGAGGCTGCCCCGACTGCATCGGGTACGTTGTGCCATTATTGAAAGGCCCGATTTCGCCGCTAGTCCTTCCGGGTATACCTTGCAAGCCTCGCTGCTGCCAGTTCTGCGTTCCCTGAGGGACGGTCCCCATCAGGTTCTGAAGCCGTGG---TGCTTGTGGCCTGGGTAAGACCTGGCCCACCGCTCCTTTCATCTGCTGCTGATGCTGGGGAAGAGCAGAGTTTACCAGCATGTTCTGACCAAAACCGCTGACCATTCCCACCGCTTGTCCAGAGGCAGTTTGCCTCGTTCCCTGGCCTGCGTTATGCGCCATGTTCATGCCGCTTTGGTTTGGGTGCTGCAACATTTGGCTCATCCCTGTGCTCATACTGTACATTCCCGGCTGGCTGGAGGAGGCGTTGCTGTAAGGAGCCATGCCCAGGTCTGACTGGCCCACCGTGGTGGGCAGCGTGCTCGGGTTCTGGGAGGGACCCATTGCCATCATGCTCGCGTTCTGGGCCATCATTCGGGACGTCCTCATGCTCTGGAGCGCTGCTTGGTTTCTCGCAGCTGCTATATCCTGGGGAGAACCTACGCCAGAAAGGGAGGAAGGTGAGAAAAAAACACGATCCTGTAAATCTTACACA-AATCAACACGTCTGTGCTTAAGAGAGAATCTGTAGGAGCCTCCT----GCACGACAGTGGGATTTCAGTTT-------GCTGTGCTTTTCCAGTGAAT---------AAATTACTGTTT------------CACACGAAGGTTA--------------------------GCAGAGA--------------ACCGGAAGGTTACCTGTCCCTGGGAGATG----------------TACTTGCAG--------------CCTAACATTAG---------CTGCA-----TCTCAGAGATGACGCGTC--CTGAGCA----CTGCTGTGGCTGCAGTCTGGGTGCCAAAA---------TTTGCCCTGCCA------------AATCCCCA-----------------CTTCTCGGAGCTGAGAGGCAG--CACAGCTGAGTGCTACCCCAGGCAGGAATCACTGATGGAGTTACGTATTTAATTTGTGAAGTGGGACACCGCTCCGCAGAG--CGCCGTCGATACAGGCCAGCAGCTTAATTTCCCATCAGGCCTGAAGCAAGGCTGGCAAGGTGAAAAGGCCAATGGTTTACTCACTAAGTAATTTTCAATTATGACAGCTTGGGGATTTGTACCCAAAGGGATTTGTGGCTTTGGATTTTTGAAGAATCGTGGCAGTGTGATTCCTTCCACGGGTGATGTGCCATTACAGCCGTGGTTACTTCCCT--GCT----AACGAGCTGCTCATGCTGCACGGCCACTGGGGCCGCAGGGCTCACACAGGCCTGTCTTTCTGTTACTTTGCTGTGGCCAACAAGTAGTTATTTTTGCAGTGACCAAGGAGTAAAAGTCTGCT-TTCCAAAGCAGAAGCTTTTTTTGGTTTGTGTGTGCATTTTTTTCCACAGGCCTGGGCGTGATGTGCACCCCGCTCTGTGCAACAGTTAGTCCCTCGGACTTCTGAAAGCTGCACAGCACTGTGATCAGAAGCACTTAATCTTCTTCAGATACGCCTGGTTCAGCTTCTACCAAGCAAATGAGAATGCCTCCATTGGCCTTCAACTGAAGCAAAAAGCCAAACTTGAGTTATCTGTTTGAAGCTCCCTTTTAAATATCTCCATTGTCTTTCAAAAGTAAGCTTTGAAAATGGAAATGTCAGACTCTGAAGACCAATCAATTTTTTAATAGCTCAGGAGGCATAAATGAATGGA-TTTTCTTTACCATTGTTACTGATTAAGTCTGTGGAAAGAAGAAAAACTGTTTTTTTTTTTGGTGGACGTTTAAAGCAAGGAAAGTGTATTAGTGAATCAATATGATAAGCACATTTTAGTCCACCTCAGGCCAGTGATGGGAAACC-----AGAAAATCCTAACCTTGTTAAATTCCACACCGTGGCAGAGAACTGGACCGTGCTCATGTCTTCCTTTGAGGGGTGGGGGAGCTATTGATTTCTGGGAAGCCAATACGCTCCTGTATTTACTATCTTTATTT---AAAAACAATTACCGGAGCTCTGATTGTGCCACGGGTTCGTTGTGGTTTTGAGTCGATACCGTACTGAACTAAA ....x...........-----------:........xx:-......x:::-...:...x.:.....-:.:.x.....x..:.:.::.x::..::x.:x::x.:.-x..x.:.:......x..:.....:.....:..:.....:........:........:....::..:..............:........:..x..:.xx.::..:.:...x..:...........x...:::.....::....x.::.:........x..x.....x...:.....:....::........:...........:....:x..:.........---.:x..:........:..xx.x.:...xx:x.....:........:.xxx...:...x.....:.....x.......:...x..:........x..x....::x...x..x...:.xx........---:.....x....::.....:..x..---.:.x.::.....:..:.x...::.x..............:..........x...:.xx........x.x:..x.xx.....xx.x.:......:.....x..:..x.x...x..:........:..:..:..:..:.......::.x...:......:.:..:.:...:..xx....x..:.....x...:....x....x...---x.....x.....:..:...:.......:..:.x:...........:x.x..x.......x..x:..x.....:.........:..........:..:..x........x...x.:..:..........x........x.......x..xx......:.:x...:.......:...........:...............x....x............:..........:..:.......x:.:x.:.x....:.....:....xx....xx..:.....xx.x:.:.:.....x..x...x.:x..............x..:...x.........::........x.......x:..x.....:.x............x.........:....::.:........................:.---------------..xx:.:..:.::....:xx..xx.x.x....x:x..-..x...------.:.:..xx.:x:...---...x...:::.:..----.x.:....---::...:.xx.x.-------.x.x.:..:.xx:.:.:...---------....x.:.:...------------..:.:.xx.:..:--------------------------:......--------------...x...:x::xx..:...---:......----------------..:...:.x--------------x.x..x...:.---------x....-----.:.::x..x....x:x..--..:.:..----...x...:::.x:x..:.:x::x:..:..---------..:.:x..x::.------------x....:..-----------------:.::.:....x......:x.:--...xx...:.-....xx::..:x..:...x:.....x:xx..:::.x..:x.............:...:x.:..x.:....--::.::..:...x..:...x:..x:.........x.x..:.:..-..:.:.::.x.x:....x-........x..x..---:::.....:.::.----...x......x.x..:x....x.x-------....::::-x..x.:.....:x:x.x:x..xx.::xx.x...x..---------:.:.:x..:....:..:x.-...::.x:.:...--...----..x..:x.xx..x....:.::-..x...-x....::.::x:.:..:.------------------------------------------....:.:...:------------......:::.-:.:....x.:.x.:.xx:.----------------....:.:..x:..-----------------------------------.:..:x.xx.x.::x:..xxx..x....:x:.:-.xx...::....:--------------------------x..:..-----.......:x.x.x.----:...:x...:.x.----------------------.:......----------:..::.:::....x..:.:x...xx:xx....x...--x...:xx.::............:xxxx:x...x....:....:x..x:..x:.:::......:.:.x.x:..:...-......x.::.x:..:..x.....:.....:..::...........:x........::----.....:.......x.:.x:x..::.:xx..:x.:.......xx......x....x.x:......-:.:x.x......:......-----....x.x:..............:::x:....x...:...x.....:.x.:..:.:x........---------..:x.x:................xx..x....:.:::.::..x..x..x:....x...---...:.x......:...::.:.....:..:.x.::...:-......:..x:::..:...:.:.....x.:.:.. 16M11I12M1I10M1I15M1I37M1D222M3D125M3D24M3D204M3D423M15I37M1D6M6I15M3I14M4D8M3I12M7D20M9D12M12D13M26D7M14D19M3I7M16D9M14D11M9D5M5D18M2D7M4D29M9D12M12D8M17D21M2D10M1I70M2D43M1I18M1I14M3I13M4I24M7I8M1I36M9I19M1I13M2D3M4D21M1I6M1I18M42I11M12I10M1D19M16I13M35I33M1I13M26I6M5I14M4I13M22I8M10I36M2I76M1D58M4I64M1I19M5D64M9I58M3D38M1I34M 1590/2281 69.7% 2545/94230402 0.0% 458/2281 20.1% 109213666 81000889 +6526 chr4 + 190214555 139725747 139725746 139725841 95 TCACCTTGAAACTGATTGACCTGCTGCACTGGGTATGGATTCCGCTGTGGCTGGAGGTGCTGCCGGGGTAGATGTGA---TTGCTGCAACTGCTAGAA chr4 + 94230402 30510044 30510043 30510141 30510044 30510043 30510141 98 TTACCTTGGAACTGATTGACCTGTTGCACTGGATATGGGCTCCGCTGTTGCTGCAGATGCTGCCGAGGCAAATGTGACTGCTGCTGCAACTGCTGAAA .:......:..............:........:.....::........x....x..:........:..:.:......---:.............::.. 77M3I18M 80/95 84.2% 98/94230402 0.0% 3/95 3.2% 109215703 80998852 +13476 chr4 + 190214555 139730413 139730412 139730735 323 TACCTGTTCCGCCAAAATCTGCTGCTGCTGCTGCTGCTGCTGCTGCCTTTGCTCCCGCAGGAACTGTTGCTTCTGCTGCTCTATCA------ACTGGGCCCGCTGATCAATGAGCATCTGCTTCATGATGGCTGCTTGGGGCTGGCTGCCCAGGAAGCCGGGGCCTGCGGGACTGGCTCCTGAGACCATGCCACCTGAGCCTGGGGGCACGGAGGACTGCATGGGGCCTGTGGTTCGGGGAAGTCCAACTGGATGCTGCTCCTGGGAAGACAAGAGAGAGGGAGATGCAGGGATTCCCCATAGAGACTCACTGCTGTTTGAAGGGAAGC chr4 + 94230402 30512528 30512527 30512830 30512528 30512527 30512830 303 TACCTGCTCTGCTAGGATCTGCTGCTGTTGCTGC------------CTCTGCTCTCTGAGGAACTGCTGCTTCTGCTGCTCTATCACGTGCAGCTGGGCTCTCTGCTCGATCAGCATCTGCTTCATGATGGCCGCTTGCGGCTGGTTGCCCAGGAA---GGGCCCCCCCGAGCTCGTGCCTGTGACCACACTGCTGGCTCCCGGCGGGACAGAGGGCTGCATGGGTGCTGTGCTCCGGGACAGTCCCACCTGGTGCTGCTCCTGTG-----TGGAGAGAGGGAG----AAGGGCTCGTTACCGAGGGT-GCT-CTGTGTGCAGGGAAGC ......:..:..:.::...........:......------------..:.....:.xx........:...................------:......:.x...x..:..x....................:.....x......:..........---...x..:x.x.::..x.:x....x.....::.::.:x.xx..:..x..x..:....:.........xx.....x.:....:x.....x..:x.:...........x.-----x:...........----.:..::..x::.:x...:x.-:..-....x..x........ 34M12D40M6I64M3D107M5D13M4D20M1D3M1D16M 228/297 76.8% 303/94230402 0.0% 32/297 10.8% 109217885 80996670 +9906 chr4 + 190214555 139740596 139740595 139740803 208 CCACCCTTTCTGATGAAGTCATCAAAGCAAAGATTGCATAACTGATGCATAGGCCTATCTTGTGTTATACTGGGAGACAGGCCAA-TGTTTCCATTAATAGACAAGAGCACCACCACGCTGCCA---AATGGAGCTCTCTGCTGCAACCACTACAAGACAGGAAGAAGGGAAGGGAAGGGAAGCTGAGTGCTC-AGGGCATGCTGTGGAGGGA chr4 + 94230402 30514019 30514018 30514226 30514019 30514018 30514226 208 CCCCCTGCCCCAATGAAGTCATCAGGCTGAAGATTGCATAACTGATGCACAGGGCTATCTTGTGTTACACTGGGAGACGGGCCAACCGCTTCCATTTATAGACAACAGCAGTGCCACGCTGCCAAAGAACGGAGC-CTTTGCTGCAGCTACAACA----CGGAAAAGGGGGGAGAAAGGAAAACCAGGAGCCAGAAGGCTTGCTGTGCAGTGA ..x..:x::.::............::x::....................:...x.............:..........:......-:.:.......x........x....x::...........---..:.....-..:.......:.:..x...----x....:.:...:::.:....:..:.:::.x..:x-.:...x.......x..x.. 85M1I38M3I8M1D19M4D34M1I19M 156/203 76.8% 208/94230402 0.0% 10/203 4.9% 109226577 80987978 +11659 chr4 + 190214555 139746512 139746511 139746893 382 ACCACTGGGCTCTGGAAAATGGATTGCTTCACCTATTTGTTCTGTCTTCTAATCCCAGGGAGGGGCTGCAAATCTCCCCATCTGTCTCTCTCGCTCTGCGGGCCCCTCGTTGCCATGGTCTTTCCCACAGTATCTAAAGGAACAAGATTCCGCAGACGTTTGACACTGGACCTCCGCAGGCAGCCAATTTGTTTTCCTTTCACCTCCCCCCTTCTCCTCCTCTCTCCC---------TTTCTAATATAGCATATTCTTTCTGTGCACCCACCAAAAGTAATGTGTCAAACTATGAT-------TATGTTTTCTTTTATGAAACAAGTAGAAGAGAGACGGATTGCTTTCCTTCCTTTGATCAAGTAAAGGTAATAAAAAGCCTAGGGAGAATCGGGTG chr4 + 94230402 30516946 30516945 30517312 30516946 30516945 30517312 367 ACCAGCAGACTTCGCAGGGCGGACCGCTTCACCCTCATCCTCTGTCATCCA-TCCCAGGGAGGGGCTACAAACCTCTCC-----TCTCCCT--------GGGCCCCCGGTTGCCATGGTCTTTCAAATAGTATCTCAGCGAACAAGATCTCTCTGACGTTTGACGCCAGACCTCTGCATGCGGCCCATTTGTTTTCCTTTCACCTCCCTTCCCCTGCATCTCTCTCTCCTCCCCGTGTTTTCGATACGGTTTGCTCCTGCCGCAGA---ACAAACAGT-ATCCGCCAGACTATCACTTTGGTGTATGTGTTAGTTCAT-----------CAGAGGGACTCATTTCTTTCTTTCTAGCGACAAAGTACA--CAACAAAGGATCTGAAAATGAGCAAGTG ....x::.:..::.x.::::...::........:x:x.x:......x..:.-...............:....:...:..-----....:..--------.......:x................xx.:.......x.:x.........::.x.x..........:.::......:...x..:...x......................::.::..x.x:.......:.---------...:::...::.:x.::..:.x.:.::x.---..x..x...-..x:.:..:.....x.:-------.....x..xx..:..-----------x....:...xx...x.....:...:xx:..:x.....x.--:..:...::::..::::.x:.x.::... 51M1D27M5D7M8D129M9I29M3D9M1D17M7I15M11D39M2D28M 244/351 69.5% 367/94230402 0.0% 47/351 13.4% 109229566 80984989 +3473 chr4 + 190214555 139747914 139747913 139747996 83 CATGGTGGTGGATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x.:.--.:..:.:...........::........x.xx.x...x::.........:.:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 63714717 NA +20238 chr4 + 190214555 139749411 139749410 139749813 403 CTTGCAGATCTAAGCGAAATCTGATTGTTTTCTCAGGCAAAAACCCAGCCCTAAGAGCAGCTCATAAACCTCACCACAGACACAGTACTCATGGCAACAGGAACTATTTCCTTTGGCTTATGAGCTCTGGTAACTGTCA--AGGGGGTGGGGGGCGCCGATCAGAGAAATCTGGAAAGACATGAGTCTGTCAGAACACGTGAAAGGACTTGACATGGAGGCCACATTTGTGTTGCACAATTTGCATGAGCACTTCTGGACAAATTCTAT-TTTCACATGCAATTCACAGACCCGCGGTGGCAGTGCTAATTGGTGAGGTTGCCACTCAAGTGTGGTACCAAACAGGAGCTCTCACT-ACATAGATGAATAATACAGAGTTTTGAGCAA---TGCAGTAATTATTTTACAG chr4 + 94230402 30521787 30521786 30522192 30521787 30521786 30522192 406 CTCACAAATAAAAGTCAAA----ATTATGTTGTATAGCAAGCAGCCAGTCCCAGCAGCAGTGTGTAACCCTCTTTGCAGAAACACAGCTAATGGCAACAAGAAATATTTCCATTCCTTTATGAGCTCTGGTAGCTGTCAGCAGAGAGAGGGATCTGCCGATCAGAGAAATCTGGGAAGACATCAGTGTGTCAGAACAAGTGAGAAGACTTGACACAGAGGGCACATTTTTGTTGAGCAATTTGCATTAGCACTTCTGGACAAATTCTACATTTCACATGCAATTCACAAACCAACAGCAGCAGTGCTAATTGGTGCAGTTGCCACTCAAATGCGGTGCCTTGTTTGAGCTATCGCTGACGTGAATGAAGACTACAGACTTTTGTGAAAAAGTGCAGCAATTATTTTGCAG ..::..:..xx...:x...----...:.x..x.xx:....:x.x....:..:.:x.....:x::...x....x:::....x...xx:..x.........:...x.......x..xx:...............:......--..:.:.x...:xx:...................:.......x...x..........x....:.:.........::....x.......x.....x:..........x.....................:-..................:...x:.:.::................x:............:..:...:..xx::xx.....x..:..-..:.::.....x.x......x.....x.x..---.....:.........:... 19M4D116M2I128M1I86M1I31M3I19M 308/399 77.2% 406/94230402 0.0% 11/399 2.8% 109227624 80986931 +20172 chr4 + 190214555 139763531 139763530 139763997 467 AGGGGGAGCCGAAATGACTTCAATTGCCAAAATAAACAGAATTGCTTAATTAA-------TCTAACT-------AAAAAATC---CTGTTCAGCATTGGATTAAAAAAATCATGTTGATGCTGCCCCTGTTTATTTGGCTGAATCCTGGACTGAGAGGGTATATTTAGCCTCAGTGTGCTTGCAGGATTGCATCTTGCAGCTCAACAGGAAATATCTGGAGTCACAGCTAAAGATATCTCTGCATGTTCAGAAATTTACGAGCAGCTGTAAAAGTGGAGCTATGGTGGGCAGAGTGCTGGAACAGTCTCCCTTTCAAATGAGAGAGGCCGCTGAATTAAACACTTGAATATACCAAGTTCATGGCAGGCAGAGGGCACCTGACATGCTAAAAATAGCCAAAGTGGAAGTGCTTCTGTTGCTAAAATAATACTGAACTGGTATGCTCCTTTTCTCAACCCACAAGAAATGGGTGAAGGGGTAGAG chr4 + 94230402 30525519 30525518 30525992 30525519 30525518 30525992 474 AGAGAGACCTAAAGCTATTTAGATGCCAAAACCAAACTTAATTGCTTAATTGAACGAGGTTCCACCTCCTCAAGAATAAGTCAAGCCGTTCAGCAGTGGA---AAAAACTCATGTTGACGGTGCCCTTGTTTATTTGGCCGTGTGTCAGCCCAAGTGGGTATATTTAGCTTTTGTGTGCTTGCAGGACTGCATCTTGCAGTTCAACAGGAAATCTCTGGAGTCAAAGCTAAAGATATCACTGCATGCTCGGAAATTTACAGCCAGCTGTAAAAGTGGAGCTGTGGTGGTCAGAGCGCT-CAACAGCCT-TCTTTCAGACAAGCGAGGAGGCTGAATTAAACACTCCACTGTGCTGAGAGCTGGGCTGGCAGGGTGCACCCGACGAGCTAAACATAGCAACAGGGGCGGT-CTTCTCTTCCTCGGATAATGCTGGATTGATCCA-TCCTGTTCCCACTCCCT---AACTGGTCTAAGTGGGAGAG ..:.:..x.::..::x.:..x:..xx.x...x:....xx............:.-------..:.x..-------..x..:..---.:........x....---.....x.........:.x.....:............:.x:.x:::.x.::..x.............:.:x..............:............:............x..........x.............x.......:..:.........::x...................:......x.....:...-x.....:..-:......:.::..x....xx...............:x.x.:.:.::..xx.xx...x.....:.x.....:...:x......x.....x.x..x..x:..-.....x..x..x::.....:...:.:..:.x::-....x...:..x:..x:---..x...x:x...x..x.... 53M7I7M7I8M3I15M3D195M1D9M1D100M1D33M1D17M3D20M 345/457 75.5% 474/94230402 0.0% 27/457 5.9% 109238012 80976543 +3968 chr4 + 190214555 139778854 139778853 139778925 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x.:...........:..x.xx:..:..:.. 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 63745648 NA +28054 chr4 + 190214555 139783173 139783172 139784056 884 CTGTAGCACAGGATAATGAAAATGGATACGTGTTGCCTGTTGTTCCTATGTAAATGCTACCTCGAGGACACAGTCTTCACCAGGCAGATGGCTAATTTCTTTGCTCTAACCTCATTTCTCCAGTATTCCGGTGTTCCTGTGACGTCCTGCTCCTGGAGTCAGGTCCTAATTGTTGTCAAGCGTTCAGAGACAAAAGTGGTGTCTACACATCATTCATGTGAAGGCTGTTACTGG-CTATGAACTGTAGTTGTGGTGGCAGCAGCAGTGACTG---CAGTGGCTGCAACACAAACC----------------------------------TTATGGCAGGTAGTACCTGCTGGTGTGGGGCTGCTCAGAACCTGCCTTTCTGCTTCCAAGTGTCAAGCTGAACATTTTCCTTTGTTATCGCTTCCAGCCCCTGGACTCCAACGTGCTGAAAG---------------CCCTGTGTCTTTCTGTTGGGATCAATACCCGCT---------TCTTTAACTGTTCCTCTCTGGTTCAGACTGTCTCTCGGCATCATTCTGACCATGCAAATCTGGGGATGCCCAAGAGAGGGCTC---ATTTGTCTTG-TCACAGA-----------TTTGGGGGGTGCTGGTTAACTTGTGGCCCCTTGGAAACCCCACTGCCACCGAGCAGTCAGGTAATCCTAATAGCCAGGACCCTCCCAGTCAGCGATTGGCCGTCTGATTGGATGCACATTCATCTTCAAGTTATGTTGTGTGACAGCCCGGGCTGCTGAACACCATTTTAACATGCAGATTGACTCCTC-GGAGGCTCTTCATTACGCATTTAGCGGTCTGTTTTCAGACTAACCAGCATGTCAGAGAGGCCCGCTATCCTCTTTCCACCTGGGTGGAGGAAATAGCTCAC--TGACTGTGGGGGAGCCACAGATATTAAAATGCATATGTTTACCTTCCT chr4 + 94230402 30535047 30535046 30535966 30535047 30535046 30535966 920 CTGAAGTGCGGGACAATGAGAATGGAAACATTTTGCCTGTTGTTGACATCCAACTGCCTCCTGGAAGATACAGTCTCCACCAGACAGATGGCTAATTTCTTTACCCTAACCTC-CTCCCACGGCACTCCAGTGTTAGTGCAATGGTCTGCCCCCAGAGTGCAACCCTAATTGCTGTCAAACGTTCACAGACAAAAGTGGTGCCTACATATCATTCATGCAAGTGTTGTTACCGGGCTGTGAATTAAA----------CAGCAGAAGCCACTTGTCAATTGACTCCAACGTGAGCCGTTTTGCTCAGACACCGGCTCACATTTTAAAGGATCAAGGCTGACGATATTTATTG---CGGGGCGGGTAGGGA---GCGCTGGCACTGGAAGATGT-------GGCATTTTCCTCTGGAGAACCCTTGGCCGCGCGGCCTCCGGCAGGCTGACAAAGGACGCGGGCTGCTCCCCCTCCCCTGTTGCTGAGAAACCCTCCCACTGAAGAAAAACCTTCA-----TTTTCCTTTGTCCTCACAGCCGAGCGGCAGTTTGCTG----TGAA-----GCGGGTGCCGAGCACAGAGCTCCTCATTTGTCTTGCTCACACACGAGACATTATTTTGGGA----CTGACTAACTTCTTGCTTCCTGGAGACGCTGCTGCCATTGAACAGACAGGTAATACTAATGGCCAG-ACGGTGACAGTCAGCCACCGGTAGGCTGATTGGATGCACATTCATCTTCAAATTATGTTGTGTGACAGCACAGGCTGCTGAACACCATTTTAACATGCAGAGTAACTCCTCAGGAGGCTCTTCATTATACATTCAGTGGGCTATTTTCAGACTAAACAGCATGTCAGTG-GCCGTGTTTATCCCTTTCCACCTGGGCAGAGGAAACAGTTCAATGTGCCTCCAGAGAATTAATACATATTACAACCCACACGTCGATTCTCCT ...x..::.:...:.....:......x..:.x............xx:..x:..x...:x...x..:..:.......:......:..................:.:........-:.:.:x.:.:.:...:.....xx..::.:.x:....:..::....xx:::........:......:......x..............:.....:..........::.:x.:......:..-..:....:.:x.----------......x..:x...x---x.x..:..x....:::.:..----------------------------------.:.x...x.::::..::.::..---:.....x.x.x:.:.---..x:.xx::..xxx.::...-------::.........:..xx:xxx.:.:x:x.x.x:..x....::.:x.....x.:---------------...:x.x:.:.x:..:..:..xxxx:x...:..---------:...:.-----.::..::.x..:.xx..x.:.xxx.....x:x.x...----..x.-----.x..:....x.:x.x..:....---..........-.....x.-----------......:----...::......x.x..::.:....:..x.::......::..:...x........x.....:.....-..xx.xx........x.::..:x.x..........................:.................x.:.............................x.:.......-...............::....:..:..x..:............x...........x.-.x.x:.:.xx:.:.............::.......:..:...x--..x..x::.:.:.x:x.:.x......x..:x..:.:..:x.:::.... 113M1D120M1I12M10D15M3I20M34I22M3D15M3D20M7D52M15I33M9I6M5D37M4D4M5D22M3I10M1I7M11I7M4D66M1D111M1I57M1D43M2I48M 595/840 70.8% 920/94230402 0.0% 124/840 14.8% 109248126 80966429 +12429 chr4 + 190214555 139786539 139786538 139786831 293 TGTGCGTAAGGCAGAAGTGACATCTTGAACTGAGAAAATGCTGTGAAGGACCTATCTGGCCCTTCAAATAAATCTCTAGATTTTTGTTTGAGCCAATCAATCAGTTCTCCAAGGTGTCAGCTGGTA--------ACAGACATATCTGTCAATACAACAGTACTGCCGTCACCGGGCAGGCTGTGTTCACAGCAGGAAGCATGGCTCAGTAGTTACTTATATTTGGGAAATGGATAACCCGGGATTATGGGTTTCA-GGAGGTGAGGTT-AAAGTGGGGTCAAGGGCCAGGTTAATGCTAGTAC chr4 + 94230402 30538463 30538462 30538759 30538463 30538462 30538759 297 TGCTCATATGGCAGAACTGACAGCCTGAACCAAGGAGACGCTCTGAAGGACCCACACGACCCTTCAAATAAATCTCCGCATTTCTATTTGAGCCAATCAATCTGGCTCCCTAAGTGTCAGCTGGTAACACACACACACACACATCCGTCAACATCCAAGTG-TGCAGTCACAGGGTAAACTGTATTCACAGTTGGAA-----ACTTAGCAATTGCTTGTGTTTATCTAAAAGATAACCCTGGATTATGCATTTCACACAGCAGAGGTTAAAAATGAGACTGGGGTTTAGTTTAATGCTAGTAC ..:x.:..x.......x.....x.:.....::..:.:.:...x.........:.:x:.:.................::x....:.:................x.x:::..x.:.............--------...x...:...:.....:.:xxx...:-...x.....x...:.::....:.......:x....-----:..:..:.:..:...:.:...:xxx..x:........x........x:.....-:x..xx......-...:..:.:::::..x::..x............. 126M8I27M1D35M5D53M1I12M1I34M 209/287 72.8% 297/94230402 0.0% 16/287 5.6% 109248076 80966479 +3148 chr4 + 190214555 139798008 139798007 139798101 94 GAAAGGAAGGAAAGAAAGGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGGAT chr4 + 94230402 32265570 32265569 32265663 32265570 32265569 32265663 94 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGAT .:.......:.....:.......:::::.:.:.:.....:....:x..x.:.....x.::xx.:x.:xx:.xxx:.:.x...:.:...:.:... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 107532438 82682117 +11861 chr4 + 190214555 139808979 139808978 139809208 230 AATGTCGGTGTGTG----ACTCCCCCACTCACTCTTTGGAGCCTGAGAGGCTCTCCTTTCTCAGAGCAATTACTACAAATGATTTATGTGACCAGTCAAAAGGGCCTGCCAGGGTTCTTATTTCATCTCCAGAAAAAGGAACTCTGCTGGAATGTTATCAGGGAGCTTGGGATTAAACTGACAGCTGCCTTTTGTTTTCCCTGTGAAAGAGCTTCTCCTTTGGACTGTGGCATT chr4 + 94230402 30542957 30542956 30543183 30542957 30542956 30543183 227 AATGGCCGTGTGGGCGCAGCTTCTCCCCCCGCCCTGCA----CCAAGGCGCTCGTCTTTCTCCGAGCAATTACCGCGGATGATTTATGTGGCCAGTCGAGAGGGCCTGCCAGGGTTCTTATTTCATCTCTGAGAAAAGGAACTCTGCTGGAATTTTATCAGGGAGCCT-GGATTAAATTGACAGCTGCCTTTTGTTTTGTTT-TTAAAGACCTTC-CCTTCGGAGCACCGCACT ....x.x.....x.----:..:.:..x.:.:.:..x::----.::..:x....x:.......x..........::.::............:......:.:.............................::::....................x............:.-........:....................x::.-.x.....x....-....:...x:::x...:. 14M4I20M4D126M1D33M1D12M1D18M 177/223 79.4% 227/94230402 0.0% 11/223 4.9% 109266022 80948533 +3175 chr4 + 190214555 139812125 139812124 139812194 70 TGCACCTGTAGTCCTAGCTACTCAGAAGGCTGAGGCAAGAAGATCACTTGAGCCCAGG---TCAAAGCTGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.:.......:::.........x.xx.x::.x.......:.....:---.:x::....... 58M3I12M 51/70 72.9% 73/94230402 0.0% 3/70 4.3% 63778920 NA +7975 chr4 + 190214555 139815934 139815933 139816208 275 GTGCTACCAGGAAAAAAAATAAAACACTCATTGTGTCGAATGGTAGAAATATCACATCTGTGCATA--TATTCACCCCAGCTCCAATATAATTCTAAGACTGCCAAGCTCTGAGACCTAGAAATGGTGAGTCAGTCAGGAGGGGAG---GAAGAGAGGGGAGTGCGAAGATAAAAATAGAGA----TGTTGATTGCATTGTTACTAATTCAGTTTAGCTCCAACAGCCCAGCGTGGTGAGTCAACAGCAGTGACAAGA-CACAAAGAAGAAAGAAGC-ACCGTGCT chr4 + 94230402 30544292 30544291 30544571 30544292 30544291 30544571 280 GTATCACCCAGAGAAAAGAGTGAGCCCTGGTTGCCTTGGATGG-----GCTTCACTCCTCTTCAGGGTCAGTCCCCCCAAGTGCAAGGTTCTACAAAG-CTGCCAGGCTCCCGGCCCCAGGAATGGCATGCCAGGCAGCCGAAAAACCAGCGGGGAGGGGGAGATGCAGATAAAAATAGAGAGAAATGTTGATTGCATTGTTACCGCTTCAATTAAGCTCAGACACTTCAGCCTGATGAGTCAACAGCAATGACAAGAGGGCACAGCAAACAAAAGCAACTGTGCT ..:::...x:..:....:.xx:.:.x..x:...:x.:.:....-----::x....x:..x.x..x:--:.x..x.....:x.x...x:.xx.x.x...-......:....:x:.x..:..:.....::x.:...x...xx.:::.:---.x:.:......::x::.x...............----..................::x....:..x.....x:...x::....x..:.............:........-x:..x..x.:.x.:....-..:..... 43M5D18M2I30M1D47M3I33M4I72M1I18M1I8M 182/269 67.7% 280/94230402 0.0% 17/269 6.3% 109271642 80942913 +32723 chr4 + 190214555 139824616 139824615 139825885 1270 AGATGTTGATCAAAATATTCATATTGCCAATTTGCACTAATTTCAGTAG-------------TTTGTAAGTATCAAGCAAGACTGTTCAA-TAAATGACCTAGCAAATTAATCTATTTTCCCC-CATTAGTTTCTGACTTTTTAGCATGAC--AATATCAGACACCCTGTTAAAGAAAAGGCCCTTCAAGCTGTGTAACTGACGTGTTCGGATTCCTCCTTGGAGACGCATCTGTCTACTTACCACCCCCGCCCCAGCCCATATACCCCCT-CCATCCCA--ACCAGGCCTCTATTTTTCAGTTCTTGCAGTACCATCAGAATAAGTAAAAAAGGACCCTGATTTTCCAGAGGGACCATGCAGTCTGAAAAGGTACGTCTTCAACATCATTAGCAGTTCATCTTCTAAAACCTCAGGGCAGCCCCTAGGCAG--CCCCTCCTGCAGCACCCCGCCCCCTTCCACCGCCACCCCTCTCTTTTGGTGTCGGCTTATCAAATTAATGAAGCCTATCTAGACGGGAGGAAGTTGGGGTAGAAGACAGTGGCTTCAGAGCAATTCAATGCAAGCCCTTCCC--------TCTTAAAAAAAAGAATAATGGGAAAAAAATTAGAATTTCTTTCTCTTAGAATAGGAAGAGGAAAGGGAAACGGTATTGGGGGTGGGGTGAGGGGTGGCTG-TGATTGTCTCCTAGTTCCCTGAAGGAGGAGATGTCTATTTACTTTCTCTGGCTGAACATTTGCATGTTAAAAAGGCACAGTGCCTTTGTGGGCAGGATTTATCAGGGCCACATTTTCTACTTGATAGAGCAG------AGTGCTGGATAAGGACTCCAGGTAA-----AGGATAAAGCAACTTCCTACGACCTTCCCTCTCATCTTTTTATAAGATAGTCCCGTCTATCATGCAGAGAATCTGGGAGGCCAGATTCCGTGGCCATGTGTGTTTTTGCAGCACGTTGGTGGGTGGCAGGAGGCAGAGCCTACCCTCGGCCGCAGGCAGCCATGAGCTGGGTGGTAGCTTCCTCCTGCAAG-GCACGG--AGCACAGGCCAGTGCCATTAGAGCCTCCCCATTCCCCT------GTATCCAGAGAGGCAATTTGCAGCGCGAGGTACAAAACACATCAACATCTCTCATCACGTCACTGACCTAAATATAGACAATGACTTCAAGG-AAGAGAAGAAGGAAAAAAAAAAAAAAGTTGCACGTTCTTTTATACCTGCAAATGCTGCCGAGCTCTTCAAACAAGCACTGGCAATGAGGAACAATAGATAACCAGTCAGATGTGAAGGGAG-AAGAGAGGAGG chr4 + 94230402 30546083 30546082 30547271 30546083 30546082 30547271 1189 AGCTGTTCAGCAAAACATTTGCATTGCCAGTGTGGACAACATTCATTAAAACCAATGTTTATCTTGCAAGGATCATGCCAGATTGTTCAAATAAATGACCTACCAAATTAATCTCTTTTCCTAATGCTATCTCCTGA-TATTTGGGATGACTTAGAGCCAGCTATCCTGCTAAAGAAAGGAGCGT---GGGTCTGGGGGAGGAGTGAGGGG----CTGCTCGGGGATGAGCCTGTATTCATTCCTCCTCTCTCCC---CTGTGAGCCCCTTTCCATCACACTACCGAGCT------------------------CAACACAATTAGTGCAAAGGG--CCCGCTTTTCCTGCAGGAGCCGAGGTCCCAAAAAGGTACAGCTTCAACATCATTAGCAGTTCATCTTCTTAAACCTCTGGGCAGCCCCTAGGCAGATCCCCTCGCACAG-ACCCCACACCCC----------CTCCCCCTTTTTGGTGTCTGCTTATCAAACTAATGAAGCACATCCAGACTGAAAGGTCTTGGGGTAGAAGACAGCAGCTTAACCGTGATTCAGTACATGTCCTTTCCCCTCCTCCTCTTTATCAAA----------TAAAGAAAGCAGCATTTCCTACACTTAAAT--GGAAGGGAGGAGGGA---------GGAGGGAGGCTAAGGGGAGGGAGACGTTTGTCTAGTAATTCCCTGCAGAAGGAGATGTCTGTTTACTTTCTTTGACTGAGCACTTGCATATTAAAAAGCCTCGGCTCCTTAGCGGGCAGGATTTATCAGCGCCACATTTTCTACTTGACAGGGCAAGCAGGCAATGCCTG-------CTGCAGGTAAGCTGGAGAACAGAACAGCACTCTGTGACCTTCTC-CTCGTCCTTC------ATGGGGCCG-CTGGCCCAGGGAGCAGCCGG------AGGTGCTGAAGCC-------------CAGCAC-----TGAGTG--AAGGGATGGGTGCTGTGCGCTGCAGCCCCCAAACAAGAA-------------TGCTGCTGCAAGAGCAAGGGAAGCACAACAAAGCTCCATTAG-----CCTTTTTTCCCTTCGGTGATAGCCGGAAAGGCAATTTCCAGCTTTAGGT--AAAACACATAAACATCTTTCATCGTGTCACTGACCTAAATATAGATGATTACTTCAAGGCAAGTGAAAAAAGGAGATGGGGAAAGA---GCCCGAT-TCTTATACCTTCACATGCTAGGAAACCCTACAAGCAGAGTGCAGTACAAAGGAGCCACAGAGAACCAGTTAGATGTGACAGAAGTGCGAGAGAAAG ..x....x.x.....:...:::.......:.x..x..x.xx....x..:-------------:...:...x....x..x...:.......-...........x...........x......:x-:::..x:.:....-.x...:.x.....--.:x::...x:.:....:........:.:x.x.---:.x.x..x::xx.:x...xxx..----..x..:..:..:.x::....x.x.x.x..x..:.:x:...---.::.:x:....:.-.....x..--...::..:------------------------..x..x...x...:x...:..--..:.x......x.x:...x.xx:x:x:.::.........:x............................x.......x.................--......x::...-.....:.x...:----------.:..:.::..........x..........:.........x:...:....x.:.:.:xx................::....x.xx.::.....:.:..x.:....:..--------....x.xx...----------x...:...x:..x.....:.x.x....:.x--.....:.:::.....---------..:..x:..x.:.....x..xx.-:.x......xx..:.......x..:...........:..........:..:....:..:......:........x.x.:.:x....x.:................x..................:..:...:------.:...:x.-------..x.......-----..:.:.:.:..:.x::..::.......:.-...:..:..:------..:.xx...-..:x.x::x:...x.x.:..------..:.x.:.x:...-------------......-----..:...--.:.:.:::.:xx..::x.x.x..x..xxx..:x..x..:-------------.x..x.......-...x..--......:xxx..:x.......-----..::x..:....------:..x..:..:.........x....x:x....--.........x.......:.....::....................::..x.........-...x...:..:.:.:.x::::...:.---..x..x.-.:........x..x.....:xx:.:.:..x...:..::xxx::.:.xx:....:.x.:...x.......:........x:.:..-:x.....:.:. 49M13I28M1I32M1I13M1D13M2I32M3D23M4D40M3D13M1I8M2I8M24D21M2D95M2I12M1D12M10D107M8I11M10D30M2D15M9D23M1I132M6I8M7D10M5I29M1D10M6D9M1D20M6D13M13D6M5D6M2D39M13D12M1I6M2I21M5D12M6I31M2D59M1I26M3D7M1D84M1I11M 811/1136 71.4% 1189/94230402 0.0% 187/1136 16.5% 109278533 80936022 +3250 chr4 + 190214555 139829097 139829096 139829219 123 AAAGGAAAGAAAGGAAGAAAGAGAAAGGAAGGAAGGAGTAAGGGAGGGAGGAAGGAAAGAAGGAAGGAAGCACGGAAGG----AAGTGGGAAAGGAAAGAAAGGAAGGAGGGAGGAA----GGAAGGATGG chr4 + 94230402 8373295 8373294 8373425 8373295 8373294 8373425 131 AAAGCACAGAAAGAGCATGGGGAGAAGGAAGGAAGAAGGCAGGCATGGAGGAAGGAAAGCCAGCTGGGTGCTCGATGGAGCCTGAATTGTGACGGTAAGAAGGGCTGGAGAAGGCAACTGGGGAAGGGTGG ....x.x......::x:x::.:::...........:..xx...x.x.............xx:.xx..:x..x..:x:.:----:.:.x.x:.x..x.....:..xx....:::.x..----......:... 79M4I34M4I10M 79/123 64.2% 131/94230402 0.0% 8/123 6.5% 131455802 58758753 +3032 chr4 + 190214555 139829105 139829104 139829162 58 GAAAGGAAGAAAGAGAAAGGAAGGAAGGAGTAAGGGAGGGAGGAAGGAAAGAAGGAAG chr4 + 94230402 26216017 26216016 26216074 26216017 26216016 26216074 58 GAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG .....:......:......x::...:..::x..:.:...x:..:...::......x.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 113613088 76601467 +5231 chr4 + 190214555 139829178 139829177 139829305 128 GTGGGAAAGGAAAGAAAGGAAGGAGGGAGGAAGGAAGGATGGAAGGAGAAAGGAAGGAAA--------------------------GAAGGAAGGAAGGAAAAAGAAAGGAAGAAAGAAAGAAAA-GAAAAAAGAAAAGGAAAGGAAAGAAAAGG chr4 + 94230402 1500698 1500697 1500852 1500698 1500697 1500852 155 GTGGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaaggggggggg .....:...::........x:..:..:..:.:x..:..:x:.:....:...::x......--------------------------...x:............x.:..::..:............-.:...x....:......::.::.::::.. 60M26I39M1I29M 91/128 71.1% 155/94230402 0.0% 27/128 21.1% 138328480 51886075 +3058 chr4 + 190214555 139829201 139829200 139829267 67 AGGGAGGAAGGAAGGATGGAAGGAGAAAGGAAGGAAAGAAGGAAGGAAGGAAAAAGAAAGGAAGAAA chr4 + 94230402 21613182 21613181 21613248 21613182 21613181 21613248 67 AAAGATAAAGCAAGAATGGGAAAAGACATGAAGGAAAGGAAAGCAGAAAGAAAATCAGAGGAAGAAA .::..x:...x...:....:.::...x.x.........:.:::x:...:.....xx.:......... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 118216019 71998536 +31204 chr4 + 190214555 139832845 139832844 139833539 695 TGTCCACATCATC-CGCAGTGATCAGCCTGG-ATTCTTCCTCTTA---AATTT-TAAATAATAACCTTGGAAGA---AGGGAG-ACGCATCTCCTTTATTTCTAGTTAAGAAAAAACAAC-----------AGGCCAGAGAGCATAACAGTAATTTATGATTTTGCTGGTGTATTATCATCCACTAATAAGTGCAACTTGAAACTACCAATTATCTCATAAGAGGGGTATCACCTTTTCTGTTGTGAATGACTACATCGATAAACGGAGGTTCAGCTCCCTCACTCTTCGTCACGTCACCAGCAGCTTCTTAGCAGCAGAAGTGAGCCAACCAGGGAAGCAGAGGAAAAACAAAAACAGTCAACACACAAACACGCAAGTTAGCCCAGCCTCTGGCCCGGGAACCCAGAGAGGGGCTGGGGAAGACAGAGAAAGACAGGGGGAGGGGGCCGCGTGGAAGCGCCTAGAGCAGTCGGCAGGTCACACACACGCGGTGCTCGGCGGCAAACTCAGTTTACAAAGAGACATCTGTTCCATTACTCCAATGCATTGTGGCTAATTACATCCTGGCCCGTCTGTGAAATGACAGCCACTTATTCTCCAGTGAACCGTAAAATCTGTACATGTTCGATTTGGGGAGTGGGAGAGCAGAGGCGTGGAGGCTAGAGTGGGAGGAAGAAGGGGGGCAGCCAAGGGGAAAGAGAAAAGACAGGAGAA chr4 + 94230402 30549969 30549968 30550643 30549969 30549968 30550643 675 TGTGTGCATTATCACACTGTGATCAGCTCAATATCCCATCTCTTATCTAATGTGTAAATACTAA--TTTGAGGGTTCAGGGAGTACGCAGCTATTTTACTTTCAGTTAAAAAAAAAAAGAGAGAGAGGAGGAGGCCTGGCATCATAACAGTAATTTATGACTTTACTGGTGTATTATCATTGGGTAATAAGAGCAACTCGAAACTGCCAATTATCTCATAAGAGGGGTATCACCTTTTCTATTTTGAATGACTCCGTCGATAAATGCAGGCTCTGCTTGCTAACACTCCGTCACATAATCAGTGGCCTTCCAGCAGGAGAGATGAG-----------AGCAGAAGAAAGAGAAAAGC------CAAGCTAGCGAGGAGACAAGCCCAGCCCGGGGCTCAG-----CAGTGCGGAGCAGGGGAGGA-----------AGCGGGGGGACGACAGGAGGAATCGCCCCGAGCAGTCGGCAGGTCACACACACACAGTGTGCAACAGCAACCCAGGTTTACAAAGAGACATCTGTTCCATTACTTCGATGCATTGTGGCTAATTACATCCTGGCCCGTCTGTGAAATGACAGCCACTTATTCTCCAGTGAACCGTAAAATCTGTACATGTTCGGCGTGGGCAGCggggagcgagaggggagcagggaggggggaaaggatggagaggggagaccgggagaaaggc------acaggagga ...x::...:...-.:.x.........::::-..:.:x:......---...x.-......x...--..x..:.:---......-.....x..x:....:..::......:......x.:x-----------.....x.:x.x..................:...:...............:x:x.......x......:......:..................................:..x.........x.:........:.x...:..x...:x..x..x..:......:.x.:...::..:.:::.....x...::....-----------......:....:.x....:.------..x:.x.:.:x.x.:::x.........:xx...:.:.-----...x.x..:..x.....:..-----------..x...:..:x.x.:x.x....x....:x........................:.:...:x.::.:....x.:x:.............................:.:......................................................................................::x....x..:...:::xx.....x.x.x...xx:.:.x.::....x.:..:....x::..::.:.:..:.x------.......:. 13M1I17M1I13M3I5M1I10M2D8M3I6M1I36M11I195M11D20M6D37M5D20M11D265M6D9M 505/654 77.2% 675/94230402 0.0% 62/654 9.5% 109282876 80931679 +19039 chr4 + 190214555 139839584 139839583 139839841 258 TTTCTTGTTCCCACCCTACATTGTTTGTTGAAATAAATATGGAAATAAGGCTGAGCAAGACAGCCAAGCCAGCCAAACTGAAATAAATTCATCACTCATGGGCTCTCAAGGGATGGAAACCGTGCATTTTTTTCTAAATGATTATTTCTGAAGCACTGAAGGAATGGCTATATCACTAATGAGGCCTGTACGCCATGACTGCTGATTATAAATGACCTGCAGAGAGACAAGGAGATAGTGGATATG---AAGGGGAGATGG chr4 + 94230402 30554671 30554670 30554930 30554671 30554670 30554930 260 TTTGTTGTTCCCACAGTACACTATTTGTTGAAATAAATATGGAAATAAGGCTGAGCAAGACAGCCGAGACAGCTAGACTGAAATAAATTCATCACTCATGGGCTCTCAAGGGAAGAAAACCACGCA-TTTTTTCTAAATGATTATTTCTGAAGCACTGAAGGAATGGCTATATCACTAATGAGGCCAGTGCTCCATGACTGCTGATTATAAATGACCTAAAAAGAGACAAGGGGATGGTGTCTGTGTGTATAGGGGGATGG ...x..........xx....:.:..........................................:..x....:.:.....................................x.:.....::...-...........................................................x..:.x..........................:x.:..........:...:...xx.:..---.x:...:..... 126M1D119M3I12M 230/257 89.5% 260/94230402 0.0% 4/257 1.6% 109284913 80929642 +21649 chr4 + 190214555 139841489 139841488 139842072 584 AGAGCAGAGAGAA-TCCCACCAGATGCTGCTTCACTATCGGCGCTGACGCTTTCTAATGAATCTGACCCCTGGCTGCAGCTCTAAAAGGGTGCAGCAGTGTGTCAATGTAAACAGCTAAACCTAGTGTCACGTCAAGTGGTAACAAGGCCACTGCTGGTTTTTTACAAGCGCTGTGCACTTAGCAGATAAAAATGAGCATCCTATCGCTGGTCCCCACAAGTCACACTTATCAACAGTGAGAAGAAACAATGCTTTGTCTGATAGGTGTTGCTTGGTGCCAGTGACAGGAAGTTACATTTCTTACAGGCTGCCCATTAGCATAATGAAAAGGCAAGTAACAGCTGCATTAACAAAATCTTTT--------------TACATGT--GTCCACGGTGAGCAGCGCAGAGCTTCCTGATGTTCCCTCTAATAAAGAGAACTAATTACCCTCCACAGTGCCACCTGGGC-TAGAGACAACCG---ATGTCAGGAAAGGGCT--TTGACAAACACATTTATTTGTCCAGGACCAAGTCCAGGGC-CAGCAA---CCCCCATTCTTCCTGGTATCAGAGTGGAGCCAGATGCACACAGGATCAATAAAAGGTCCAGA chr4 + 94230402 30556761 30556760 30557361 30556761 30556760 30557361 601 AGAGCATAAAGAAATCAGAGCAGATGCTGCATCGGTATCATTTCTGAAGTACTCTAATGAATCTGACCCCAGTCTCAAGCTTTAA--GAGTGTAGTGGCTTGTAAATGTAAACAGCTAAAACTGGTGTCAAGTCAAGTGGTAACAAGGCCGCCGCTG--TTTTTACAAGCCTCGTGCACTTAGCAGATAAAAATGAGCATCCTATCAAAGCCCTTCGCCAGCCGCCGTTATTACCA-CGAGAGGAAACAATGCCCCGTGCAATCGGTGTAACCCAGCGCCACTGACAGGGAGCCCAATTTCTTACAAGCTGTCCATTAGTATGATGAAGAGACTAATAACCGCCAC----ACACGGTTTTTTATCTTTTCTTCCTCTTCTTGTTGGTCCACTGGCAACTGCTAATAGCTTTCCAGGGCTCCTTTAAATAAACAGAACTAATTACTCCGCACAATGACACCACGGCTTACGGACAACTAATTATGTCATGGAGGGGTTTCTTAACACGCACATTTATTTGCAGAGGGCCACGTCTAACATGCGGCAAATTTATTCCGTCTTTATGCTATCAGC-TGGTACCAAAGTAACACTGAATACACGGCAGATCCAGA ......x.:....-..xx.x..........x..:x....:x:x....x.:x:..................x.x..xx....:...--.:...:..::.:x...x................x..:......x...................:.:....--...........x::.................................:xx.x:.::.:.x..:.:.xx....:.x..-:....:..........:::..x::..x.....x:.:::.:....x.......:..::xx..........:....:.......:..:.....:..:.x.:....x..::.----...x::.:....--------------.x.x...--......x.xx.:.x..xx.x.....:.:::x.:...:.:x......x............:.:x....:..x....xx...-..x:......::---......x.:.:...:.--..:...x:............:xx...:...x...:.:x::-.:....---:x::.xx....:x..x......x-...x:...:.xxx....x.:..xx.:::x..:...... 13M1I71M2D70M2D77M1D109M4D12M14I7M2I80M1I12M3I16M2I40M1I6M3I23M1D38M 413/574 72.0% 601/94230402 0.0% 37/574 6.4% 109284728 80929827 +3195 chr4 + 190214555 139844899 139844898 139845015 117 TGGCTCACACTATTCACCTTCCTTTCCTTTTGATATCATCAATATGGTTTTTCTCCTGGAAGAGACTTTCTATTTCTCTTTCTCTCTCTCTGTCTGTCTCTCTCTCTGTCTCTCTCT chr4 + 94230402 47086624 47086623 47086740 47086624 47086623 47086740 117 TGGTTTAGAGCCTTTGCTTGCATGTGATTAAGGTTTTAACAATATCATGCTTCTAACAGAAAAGTCACTCTGTTTCTCTTTCTCGGTCTCTGTCTCTATCATCTTCCATTTCTTTTT ...:.:.x.x:x..::.:.x.x.x.xx..xx.:.x.:.x......x:.x:....xx::...:..x.x:...:............xx.........x.x..x:::..::.:...:.:. 117M 71/117 60.7% 117/94230402 0.0% 0/117 0.0% 92758275 NA +10726 chr4 + 190214555 139847924 139847923 139848220 297 GTATGTTTGATCTGGACAGGAGACTATTTTAGGGATCTCCAATCTCATCCATTTGATCTATTTTTCTTTTAAGCATGTGTGCTTAGGAAATTACATATTGTAAGCGACCCTGGGGTGTGCAATCTTATCTCTTTTAATACACTTTTCCATTCTGACAAGGAGCTTCAGTGGCTTGGAATAATCCTCTTCAATTGACAAAAGAAGCCCCCAATTTCTAAGTTTTTAAACCATTAGTGGCTGATCAGTTGCAACAAATATGCTGCCACTGCTGCTGCTGCACCTAATGATTGAATTTTA chr4 + 94230402 30563700 30563699 30563979 30563700 30563699 30563979 280 GTTTGTTTGATCC--AAAGGAAGCCAC---ATAGAGCTAAAATGTTGGCTGCTTAGTCTGATTTT--TGCAAA---GTGCCTTTAGTGAATTAAATATTGCAAGGAACCCTAGGGTGTGCAATCATATCTCTGCTAATACACTTTTATATTCTGACAGGGACGCTTAACAGCATGAAATAATCCTCTTCAATTTACAAAAGCAACTCCCAACCTCTGAG-TTTTAAACTATCAGTGATCGATCACTCGCAACAAATA------CAACATAGCTACTCTGTCAACAGACTGGATTTCA ..x.........:--.x....::.:.:---.x:..x..xx...x.::x.:::..::...:x....--.x:..:---...:x:....x:.....x......:...x:.....:............x.......x:............x:.........:...xx:.:.:::..x..:.................x.......x.:.:.....::...:..-........:..:....:::.....x.:..........------..x:::x...:..x:::.x.xx..:..:....:. 13M2D12M3D35M2D6M3D143M1D37M6D34M 199/280 71.1% 280/94230402 0.0% 17/280 6.1% 109284224 80930331 +3177 chr4 + 190214555 139862069 139862068 139862151 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGATGCTGAGACAGGGGAATTGCTTGAACCTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::.x......x.xx.x...x::........::.:..x:xx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 63828872 NA +3513 chr4 + 190214555 139864545 139864544 139864618 74 GTGTACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..x....:.............::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 63831341 NA +3546 chr4 + 190214555 139880043 139880042 139880115 73 TGTGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGAAGACAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:.........::.:........x.xx.x...x::..............x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 63846838 NA +91893 chr4 + 190214555 139889326 139889325 139890991 1666 TGCTCGAAGAGTGTGTCACTTTCACACTTACCTGACCGTGGGATGGAAGTGCAGCGTAAGCCATGGGCTGATTCATCACTCCTTTCTGCTTCATGAGAAGCAGGCGTTTCTGGTCTTCGCTCAGGTGTGCCCTGGGGGCCTGGAGCTGTGGAGGTGGCGGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGCTGTTGCTGCTGCTGGATATACGGCATCAAGGGGTTTTTGTTGGGGTTGGCCACTGGTGGTGTCATCCTCTGACTCAGGTCTGCATTGAAGTGGGTCAGGGGTTTAGTGTTGCCATAAGTCAGAATATTGTGCTGTTTGTTTAAGGAGTTTGTACCCAAGTTATTTGGCTGCTGATTGATCATATTCATGTGATTCTGAGGGAGGTAGTTATTCATTGTTGTCTTCTGCAGGTTGTTTGCCATTGGAGGCACTATAGGGTTTTGGTTGTTAAAGGCTTGGGGGTACATCATTGGGCTATTTGGTTTTTCTGCAGTAAAAGCTGCTCCATATGGACTAGAGGGAGGTCCTAAGGGAGACCAATTTGAAGTCTGATTTGAGTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGTTTCTGCTGCATGAGTTTGGCCCTTTGTTGCTGCTGTGCAGCCATCTGTTTGAGCTGTTCTGCTGGAGACATGTCAGAGCTGGGCACAGCCACAGGCCCTGACGCTGAACCGGCCACTGTCACTGCTGCCGGATTCAGGAGATAACCATTTCCAGGCCGAGGTGGAGCTTGGCCTGGAGTGTGGGCTTGGTTTGGAGTTTGAGGGGACTGGACAGCACAGTTTGCTGGTGAGCTTGCAGGGTTTGGAGCTGCGGGAGTGCTGGCAACAGAAGGTAAACTAGTGGCCGTGGAGACAGTAGAAAAGGGAGGACCAGAAGAAGAAGGCCTCGCCTGGGGAGATCCCATGGAGACATGTGCGAAGGGAGAGTGAGAGGGGTCGCTCTTCACGCTCGCACTCTCCTGGGAGAGAGGGGTCTCAGTTGCTGGCTGCGAGAATTCTGGCTCCTTCTTCTCTTCAAAGTCTTCGTTGAACAGGTCCTGTATGTCATCCTCAGGAACCGTGTTGGCCAATTCATCTATTAATTCTTGCCACTCCTGATCATTCAGATTAATGTCTGAGAACAGCTTGTTCTGATTTGAAAGAGATGTTTCTGATGTGTCTATGCAAGTAGGGTCATCGAGAGGTTCTTGTTTGAGGTCTTTGCTCTGCAAGATGGTGAAGCTATCCTCCAGGTCACTGCAACCGTTGACAGGAAGTTTAATCTCAGGGAGCCTACCATTCTTACTTAGATCTTCTAGAAGCCCAGGAGTGTGAGTTCCACTGTTCTGCAAGGGCAAAGAAGGTTTCAGGTCAAGTTGGTGAAGAGGAGAAGCTGAAGGCAGTGGCATGTTACTGGGCAAATTGTTGATGGCTTCCATCCCCGCAGAAATGTCCTTTCGAATTCGTTTGCTAGTCGGAGAAAAATTCCCATCACAAGCACCATTCTGCTGGTCTCCATTAAGTGGTGATCGAGCTCCTTCCAACTTCCTTTTCACAGTCTCTTGTAGCTGGAAAAGAAACAGGAAAGAGGA chr4 + 94230402 30579183 30579182 30580725 30579183 30579182 30580725 1543 TGTCCGAATATTGCATAA---TCGCACTTACCTGAGCAAGGGAAGGAAGTGTTGCATATGCCATGGGCTGGTTCAGCATGCTTTTCTGCTTCATGATGAGCATGCGCTTCTGTTCCTCACTCAGGTGTGC------------------------TGCCATCTGAGCTTGCATCTGCGGCTGCGGGGACTG---------------CTGCTGCTGTATGTACGGCATCATAGGGTTCTTGCTGGGATTTGCCATTGGTGGGGTCATCCTCTGGTTCAGCTCAGCATTGAAGTGGGTCAGAGGTTTGGTGTTGCCATAAGAAAGCATATTAGGCTGTTTGTTTAAAGAGTTTGTGCCCAGGTTATTTGGCTGCTGATTGATCATATTCATGTGATTCTGAGGGAGGTAGTTATTCATTGTGGTCTTCTGTGGATTGTTTGCCATAGGAGGCACTATTGGGTTTTGGTTGTTAAAGGCTTGGGGATACATCATTGGACTATTTGGTTTCTCTGCACTGAAAGGCCCTCCATACGGACTAGATGGAGGACCCACAGGCGACCAGCTTGAGGCTTGATTTGGATGCTGCTGCTGC------------------------------------------------------------------TTCTGCTGCATGAGCTTAGCTCTTTGCTGCTGCTGTGCGGCCATTTGCTTGAGCTGTTCAGCTGGAGACAAGTCAGCACTTGGTATATTCACCGGTCCAGGCCCTGATCCTGCCACGGTTGCTGCTGCTGGGTTCATAAGATAGCCATTTCCAGATCGTGTCTGAGTTTGGCCTGGAGTATGGGCCTGGCTGGGAGTCTGAGGCGACTGAACAACACAGTTTGCTGGTGAGCCTACAGGGATTGGAGCTGGTGGAGCACTGGATACAGAAGTTACGCTAGAGGCTGTGGAAACATTTGAGAATGGAGGACCAGAGGAAGAAGGCCTCACCTGGGGAGATCCCAATGGAACATGAGCAAAAGGGGAATGAGATGGATCGCTTTTGACGCTTGCACTCTCTT---------GAGTCTCTGTGGCAGGCCTCGTAAGGTCTGGCTCCTTCTTCTCTTCAAAGTCTTCGTTGAACAAATCTTGTATGTCATCTTCTGGAACAGTGTTTGCTAGTTCATCTATTAGCTCCTGCCACTCTTGATCGTTCAGATTAATGTCTGAGAAGAGTTTGTTCTGATTTGAAAGGGATGTCTCTGAAGTGTCTATGCAGGTAGGATCGTCCAAAGGCTCTTGCTTTAGTTCCTTATTCTGCAGGACATTAAAACCATCGTCTAATTCATTGCAACCATTAACAGGGAGCTTTATCTCTGAAAGCCCACCATTTTTACCCAAGTCTTCT---AGCCCACTACCATGAGTTCCACTGTTCTGCAGGGGCAGGGATGCTTTCATGTCAAGCTGGTGAAGAGGAGAAACAGCAGGCAAAGGCAAGTTATTGGGCAAGCTGTTGATTGCCTCGATGCCT---GGTACATCTTTCCGTATCCGCTTGCTGGTTGGAGAAAAGCTGCCATCGCAAACTCCATTCTGCTGCTCTCCATTGAGAGGTGATCGTGCGCCTTCCAACTTCCTTTTTACAGTCTCTTGAAGCTTAAAGGAAAACAAGAGAAAAAA ..::....x.x..::.x.---..:...........x.:x....x.......:x..:..x...........:....x..:x.:..............x:....x...:.....x..:..:...........------------------------..x.:x...xxx:...xx....x.....x.xx:...---------------.........x..:..........x:.....:...:....:..x....:......x...........::....x..x.................:.....:.............xx..x.....:x.............:........:....:............................................................x........::.:...........x...........x..........................:...........:...........:......x.:....x:x.......:........x.....x..:.x:..x.....::....:.::.......::.....:......------------------------------------------------------------------..............:..:..:.....:...........:.....:..:...........x..........x.....x:..x..:.:.x:...x..:..x.:.x....x..x.....x..::.......:..:....x:.....:..........::..x.x:x...:............:.....:...:.x.....:.....x.....:...:..................:.:.....x.........xx....::....xx.......x..x:....x...:.....:...x.x..:..x...........:............:...............xx.::.....x..:..:..:..:.....x..:.....:..x.....:........:.---------.:.....x..x..x...:x..x:.:x.....................................::..:...........:..x.....x.....x..:.:...........::..:........:.....:....................x..:.................:.....:.....x...........:.....:..:..x.:...:.....:..x..x..:..::......:..::x.:..:.:...x..:.:x...:.......:..:.....:..:..x.....x.::....:......:....::.::......---......xx.x::...................:.....::..x.x.....x......:...............:.x.x.....:x....x....:.......::.......x..:..x..x..:---.:x.::..:..:..x..:..:.....:..:........::.x.....:...:.x...........x........:..x........x..x.................:...........x....x:..:::.....:..:.:.::. 18M3D109M24D36M15D385M66D400M9D326M3D123M3D146M 1239/1543 80.3% 1543/94230402 0.0% 123/1543 8.0% 109310143 80904412 +16145 chr4 + 190214555 139902430 139902429 139902900 471 GGAACTGTCATTATTTGCATGTCTTTTGAGTAACT-TTGTTAATAAACAGAAACCAAGGCAGGAGGAGAGAATTTTTCTCTCCGGGATGAATCCCCCATGGATGAAGAAGATACCCACAGACAGACAGG-------CACGTTCTCACA----TACAGGCAAACATGG---AAGTCATTTGAGCCGCTCTGAAAATTTTCAGCCAGGC-----GGAGGTACACACCACACATTCAGCCCGTAAACAGCAGAGCTCTGGAGCCTGGCGGCAGAGCTTTCATCTGTGGGGCAAAGCGGCTCGGCTTCATCCCACCAGCTGAAATTCATTTTTCAAAAGAAATTAGACCAAGGTACTGTTGTTATAGCAACAGTCAGAGTCATTTACACAGCCTCTTCCGCACAACCT-CACTGACTTCTGTGGGCAGCGATTTCAATTATGTACAGGGAGTGACCAAGGCTGAGCCCGGGTGGACCCTTTAGTGCCCCTTTAAGA chr4 + 94230402 30583185 30583184 30583659 30583185 30583184 30583659 475 GGACTTGCCGTTATTTACATGCCTTTGGAGAAACTCTTGTTG------------CGGAGCAGGAAAAGGTCAAACTTCAGT--GGGCTGACTTTTTAAAGGACTCAACCGGGGGGCAGAGGAGGACAGGAGCTGTGCACGCCAACACGGAGCCACACGAGGACCTGGCCCAGCTGATCTAACCTGCCCTGAAG-TTGTCAGCAGGGCTGCTCGGACATGC-CACAGCACACCCGACACATAAACAACAGAGCACCG-AGGCTGTCGGCAGGGCTTTCATTTGCCGGGAGAAGCTGCTTCGCTTCATCCCACCAGCAGCAATTCATTTTTCAAAAGAAATTAGACCAAGGTGCTGTTGTTATAGCAACAGTCAGAGCCACTTACCCGGCCCCATCCCCCCTGCTTATGCTGACTTCAGCGGGCAGCTATTTCAATTATGTATGGGGAGTGACCAGGACGGCGGCTGCTTAGTTCTTTTATTGCTCTTTCAAAA ...x:..:.:......:....:....x...x....-.....:------------.:::......::..:xx.xx:...xx.--...x...x.::::x.x...:xx.:xx.:x:xx..x..:x:......-------....::xx...:----:...x.x::..x...---.:x.x..:.:.x.:..:.....:-..x.....x:...-----...x:.:.-...x:....::.::.x.:......:......x.:.-..x...x......:........:..:x...x:....x...:x................x.x................................:........................:..:....x.:...:.x...x.x.x:.:.-::........x.:.......x..............::...........:.:.x.x.x.:.xx.:.x:.:....x...:.:..:..:. 35M1I6M12D27M2D46M7I12M4I15M3I23M1D13M5I8M1D35M1D147M1I87M 323/454 71.1% 475/94230402 0.0% 38/454 8.4% 109319245 80895310 +49754 chr4 + 190214555 139921508 139921507 139922709 1202 GCTTCCCAAAGCCCTTCCTCTGGCACTGCCAACGTTAACGCCGATCTGTGGGGAGACTGCAATTCTAACATAATGAGATATTAATGAGCTCTGCACATGTCCCTAGCCACAACACTTCTCTCT-----CCCCCTCACCACAAACCCCCTTCAGCAAATCTAAAGAGAATCAGCTCCTCCT------CTGACACTACAATTCCTCCACTTTCCCTGGAGCCTGCCCTCTCCC-ACTGCAGCACCTGGGTTGCCCGCTCACCTTAAGCTGCCAGCACTACAGAGCACCAAATGGGCTGGCACTGCCTTGTTTCCTGGCCTAACGGATGCTTGTTTAAACACTGGAGCTGTTTGCATTGCTGCGGCTCACTGCATGTTAAACACAGTCCTCTGAAACCCTATGCCAATCCAATAAAGGTATCAGCAGTTCAGTGTGGGGAGGCAATTACTATATGGTCCCAAGTGTGCCTTCTAAGCTCTAGGAAGGAAAATTTGATCGAACAACTAAAAGGAAAATCTGATTCGGCTCAGCATCACGTGGAGGACACAAGGCTTAACTGCAGCCAGGTCTGTGGAGGGCAGAGGGAAATCAATCCAGGAGCTAGGGAGAGCAAGTGCACATTGTTAAGAGGGCTTTAAGCCAGCCTGTTAGTAATACTGTCTCCTGCGTTTGGAAAGACACCCGCCTGTCCTCCCCCTTCTGCTCCCTTCAGCTTGCTTGCTTTTTAATTCCAAGGGGTATACTTATTTATTTGCTAATGACAAACTACCATCCTTCTTAACACCCTCCACCTTCTCACTCACCTTTAATTCCTTAAGCA---CTCATATTTAAAAAATGGCTTTTCTTGTGCAAGATCATTACCATATCAAAGGCGA-----TGGAGAGAGACAGCAAAAATGATAGAGGGATAACATACAGGCAGAGAGAAGAAGGCAGGCCTGCTTCA--GAGAGAACGGTGGGTCCCTAACCTCAAGCTAATGATACCAGTCGATAATGCAATGGATTGGTTTTCTGCCTTAGCTAAGTCTGAAAAATCAGGGGAATTAGACATACGATTTACATTTATTTCTCACCCAAGAAGCAGAAGTTAGAAAAGTGAATCATTCCCTCTGTTTTTAAGTTCTGGATATGAAAA----GATATGGAGCCTAGGGTTTCTTTTACTTCTCC--TTCTTTTTCATTTCAAAATCAGCTCCAAAATGGCCCATCTTTCCCAAGGAAG chr4 + 94230402 30595132 30595131 30596285 30595132 30595131 30596285 1154 GCTCCCGTAGCCCCTTCCTCCAGCACATCACATGTTAATGCCAATCTGCTGGGAGACTGCAATTCGAACATAATGAGATATTAATGAGCTTTGCACATGTCCCCAGTTGCAACAGTTCCCTCTGTCTGCTCGCTCCCCACAGCCC--------------TACAGAGAT---GCTCCTCTTGTCTTCCTGACGCTGCACTTGCGTC----TCCCTGCGCCCCCTCCTCCCCCTCCTGCAA-ACCCCACTGCACCGCTCACCTTAAGCTGCCAGCACTAAAGAGCACCAAATGGGCTGGCACTGTCTTGTTTCCTGGCCTAATGGATGCTTGTTTAAACACTGGAGCTGTTTGCATTGCTGCGGCTCACTGCATGTTAAACACAGTCCTCTGAAACCCTACGCCAATCCAATAAAGGTATCAGCAGTTCAGCGTGGGGAGGCAATTACCATGAAGTCCCAAGTGTGCCTTCTAAGCTCAAGGAAGGAAAATTTGATCGAACAACTAAAAGCAAAATCTGATTCGGTTCAGCATCACGTGGAGGACACAAGGTTTAACTGCAGCCAGGCCTATGGAGGGCAGGAGGAAATCAATGGGCGAGCTGGGGAGAGCGACTGCACGTTGTGAAGAGGGCTTCAAGCCGGCCTGTTAGCAATGCTCTCTGCTGCCTTCAG--AGCCACTTCCC--TCCCCTTTCTTCTGTGTGCCAAGGTGTGCTGGCTTT------------------CTTTCTGCTTTTTTAATGATATGCTACCAATTT----------------CTTTTCACCCTTCATCAGTTCTTGAAACAATTCTCTTTCTGGGAAAGGTCCTTTCCCTGTGCAAAGTCATTGTCATATCAAAGGGGAAGTGTTACACAGGAACAGC---AATGAGAGAGGGCTGAT-----GGTAACCAAAAAAAGATCTG--TGCTTCATCGAGAGATGAAATAAATCCAAACCTCAGACTAATGA---CAGTCAATATTTCAATGGATCAGCTTTTTACCTGGGCGAGGGCAG-AAAATCAAGGGAGGAAGAAGCTGTATTTCAGTTCATTTAATCCACAGAAACAAAGCCTCTTTAAAATGTTCCGCTTCCTCTGCTTTTAAGTGAGAGATAAGGAGATGGGGGAAGGGAGGGAATGTTTCCATTTTATTCTTTTATTTTTTTTAAACTTTAAGCAGAGTCTAAGATGGCC--TCACTCCAAGGGCAG ...:..xx.:x.........::....xx.xx.:.....:...:.....:x...............x........................:............:..:::.....x...:....-----.:.x...x.....:x..--------------..x.....x---.......:.------.....:..:..x..x.x:.----......x:x..:x:....:...-x.....:-...:x:x.xxx..........................x........................:.................:.............................................................................:..............................:................:..:x:........................x...............................x..............:.........................:...............:..:..........::..........xx:x.....:........:.x.....:....x..........:.....:.........:...:..x...x....x..::.--..x...::x..--...:.:::......:x:x.:xx:.:x....x.....------------------...x:.xx...x:......:.x:......x::.----------------...:....:.x:.x.:.:...:.x..:..---...x.x:.x::...:xxx....:.:.......::.....::...........x..-----.:x.x..::.....---.....x......x.:.:-----..:.:xx.:..:...::xx.--.......--......xx::xx::x:..x.......::.......---.....:...x.x........::.:...:.:...x:..x.:.x.x.-.......:....:xx...x::xxx....xx:..:....xx:x.x..::..xx.::xx.:xxx...:..xx:.::.:......:........xxx:....x.:.:.----.:x.x....xxx.x.x..:.x...xx....::--..:.....x.x:.:x..::x::x..:..:......--..x:...x.:..x.. 123M5I17M14D9M3D9M6I19M4D22M1I7M1D431M2D11M2D36M18D33M16D29M3I55M5I14M3D17M5D20M2D7M2I35M3D45M1D105M4I32M2I35M2D15M 854/1126 75.8% 1154/94230402 0.0% 104/1126 9.2% 109326376 80888179 +3204 chr4 + 190214555 139934071 139934070 139934148 78 ATGTGTGAATATATGAATGTGTGAATGAGTGTGTGTCTATGTGTGTGAATACGTGTATGTGTGAATGTCATGTGTGAA chr4 + 94230402 15641906 15641905 15641983 15641906 15641905 15641983 78 ATGTTTCAATAGAAAAATGCGTGTATGTGTGTGTGTCTATGTCTGTGTCCACAGGCATATATAGCTGCCCCGTTTGAA ....x.x....x.x:....:...x...x..............x....xx:..:x.:..:.:.::x..:.x:..x.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 124292165 65922390 +3628 chr4 + 190214555 139936569 139936568 139936638 70 CACTTGTAGTTCCACCTACTTGGAAGGCCGAGGCAGGAGGATCACTTGAGGCCAGGAGTTCAAGGCTGCA chr4 + 94230402 76033207 76033206 76033276 76033207 76033206 76033276 70 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...x..........x.......:.....:...x.xx.x.:.x.......:x....:..:.:x:.....:. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 63903362 NA +3046 chr4 + 190214555 139937372 139937371 139937432 61 GACAATGATCTAGCAAAGGAGTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCA chr4 + 94230402 52477964 52477963 52478024 52477964 52477963 52478024 61 GACCACAACCTAATAGAGAAATTATTTTCTTCTATGAGATGGGGCCTTAATGTGTCACCCA ...x.::.:...::.:..:.:..x....:..:.x........:.:...:x.x......... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 87459408 NA +7984 chr4 + 190214555 139946952 139946951 139947100 149 CTTTAGAAAAGCAAAGTTTGCAACATGCTATAATTAAGCTCACATCCTGACAGTAAAAACACAAAGTTTTATTCTAAATATAGAGGAAGAATCTCCACATTGCACAA----CCTTTCCAATTGTTGTTTTTTAACATTAGTCATTG-ATGTCAG chr4 + 94230402 30604580 30604579 30604731 30604580 30604579 30604731 152 CTTCACAAAGGCAAAGTTTGCAGCACGCTGTAATTAAGCTCACATCCTGACAGCGAGAGCATGAAGTTTTATTCTAAATATAGCAGAAG--TCTCTCCAATGTACAGCCCCCCTTTCTAATGCCGGATTTACAACATTAGTCATTATATGCCAG ...:.x...:............:..:...:.......................::.:.:..::....................x:....--....:x..x..:...:----......:...xx:x.x...x:.............:-...:... 89M2D16M4I35M1I7M 118/147 80.3% 152/94230402 0.0% 7/147 4.8% 109342372 80872183 +3805 chr4 + 190214555 139948796 139948795 139948881 86 TTAAACCTCACAAGATCCCTGTAAGGTAGAAACTATCATCCCCATTGTACGTGTGAGAAAACCGAGGCACAGGTAAGAGAGGTAAT chr4 + 94230402 93120850 93120849 93120931 93120850 93120849 93120931 82 TTAAACCTCACAACATCCCTGTGAGGTAGGTATTACCCCCCATATTACAGATG-GGGGGAACTGAGGCACAG---AGAGACGCAAT .............x........:......:x.:..:.x:..x:...::.x:..-.:.::...:.........---.....x.:... 53M1D18M3D11M 62/82 75.6% 82/94230402 0.0% 4/82 4.9% 46827946 NA +9952 chr4 + 190214555 139951165 139951164 139951709 545 AAGCCCTGTTCTTTGTAAAGGGC------CTGTGC-TGGGAGCTAGAAATGTGTCACACCAAGAACATCCA-CCATTGCCCAAAGCTGTTTTCCTTGTGGCTTCTTCAGTAGCAGCCACGC-TGCCTTCAGTGTTGACAGTCAGCAATTTTGAATGTGCTGACATGGAGAACAGTGACCACAGAGTCAATGCACACCAGCAAGGAAGAGAAAACAAATGCGGAAATGGAAAGGTGATGCTGGGCCTCTGTCTTTCCCTGCTTCTGGAGGCCCACCAGTGAGGTCACAGGTTGGCCTGTGGAGGCCTGGAGGGCAGG----GAGCACA------GGCAGCCTCACCTCTTTCTGCTGTTTCCCTGCCATCACAACTTGGTCCCCGCATTTCTATTTTGGGGGCTGACGCATGCAGAGCTGTGGAGGAGGGAGCCATTCCCTCTACCA-CCTTAGGTCCCTCTCCTTGCAGCTGGCTCCTACCAAGAGGAGAGAGGAAAGGGTCAGCTGTGGCTTCTCGGCAGCTCTGTGAACTGCTCTCTCC------AACACTGAACTCAACAAATGTTCT chr4 + 94230402 30605925 30605924 30606454 30605925 30605924 30606454 530 AAGCCCCGTGTTTTTCAGGGGGCTCCAGACTGTGCCTGGAAGCTGTGAACGTGTAACAGGGAGCAAATCCAACCTTTACCCAAGGCTGTTTTCCTTGCGGTTTTTTCAGTAGCATGCATGCATGCCTCCACTGTTTACTGTCAGCAATTTTCAACATGCTGACATGGCTGAAAGTGACCACAAAGCCAATGCAGGC-----AGAGGGAAGGAACAGAAGTAGAAATGT-CAGGAGGTGC--AGACTCAAACTTGCACT---------CGTGCAGCAGT-AACTACCAAGGTACCCTGCGCATCTTAGGGAAGAACGTGATTAGCACAGCTTGGGGCAGCCTCACCCTTTTC----ATTAAC---CAATTGAGCTTTGATCCCGGTGTTTCTATTTCCGTGGCAAAAAAAAAAACAACAACAAAGAGCAAAGT--TTCACACAACAAGAGTTGTATTTCTTTCCCTACTATTGGCTC------------GCTTGGGATGGCTGGGTTGT--TTTTCCAGCAGCTTCACGAACTTCTCCTCCCTAGTTTAACTCCGAAAGCAATACTTGTCCT ......:..x:...x:.::....------......-...:....:x:..:....x...xx:..x.x.....-..x..:.....:.............:..:..:..........xx..:..-.....:..x....x..x............x..::...........xx:.x..........:..:.......x:.-----..:::..:::....:.x.::......x-x...x.:...--:.x...x:x...x.x..---------x.:x..x....-.:x.xx..:.x.:x....:.x.xx::x..:::.x.x.----x......------............::....----:..xx.---.x..::x:x:...:....x.::.........:x.x...x:.x:x.x:x.x.:.x::::..::x::..:--...x.x.x..x.-xx..:x:.::..:...:.:.x::......------------.xxx..:.x..x.x:.:...--:..::.:......::::.....x...:::..------...x.:...xx...:.xx...:.. 23M6I6M1I35M1I49M1I74M5D27M1D10M2D17M9D11M1D37M4I7M6I18M4D6M3D68M2D12M1I29M12D20M2D31M6I24M 330/504 65.5% 530/94230402 0.0% 67/504 13.3% 109345240 80869315 +13612 chr4 + 190214555 139957822 139957821 139958103 282 CCACAGCTAAAATGTTCCCCCAACCTTAAGCTAGATAGGAGCAATGCAATTATGACAC-AGGAGCAAAAGAAGCTCATTAACATATCCGTGACTGACACAGAAGATCATTAATTAGGCATTCTGAGCATAAGTATATATGTATAAATTAGCATCTATTCACCATTTAAACTGTAAGAGATTTTTCATATCTGAATATTAACTATGTTGGAAAATTACTAAGTTTTCCTGAGTGAATTCCACAAACAATACCCATCCTTGATAACAAAAATAAA---------ATGAAGATAA chr4 + 94230402 30608759 30608758 30609043 30608759 30608758 30609043 285 CTGCAGCAAAAACATTCCCCAAACCG-AAGCCAGACAAG-GCAACACAATTATGTTAAGAGTTGCAAAATGTAGTCATTTGCATATCCGTGACTGACACAGAAGATCATTAATTACGCATTCTGAGAGTAAGTATATATGTATAAATTAGCATCTATTCATCATTTAAACTGTAATAGTTCTTTTATATCTGAATATTAACTATGCAGGAAAATTAGGAAGTTTTCTGGGGAAGGGCATCCAACCAA-----AGTTCTATCAGCAAAAATAAAGCCTGGATCACGAAAATAA .::....x....::......x....x-....:...:.:.-....::........x:.x-..xx......x:x:x.....x:..................................x..........x:................................:..............x..x.:...:....................:x.........xx........:x.:.x:::x:x:x...x...-----.x:::.:x:.:..........---------.:...:.... 26M1D12M1D18M1I188M5D21M9I10M 216/275 78.5% 285/94230402 0.0% 17/275 6.2% 109349063 80865492 +19400 chr4 + 190214555 139962215 139962214 139962605 391 AATAAATCAACTCATCA---TATCAGTGGGCCTTTCTCAATAGGTGTTGCCGTTT---AGCCTACAAAA-CTCACTTTGTCAGAGCTATTTCAGCTCAAGTTAGAGCATAACTAGTTAGACAACTTGATCTCA-TTGAAATATTTGGTGCCTGCTGATATGTTCAAACAAATTCACCAGATCTTGATTATGTTCTGGCAATTAAAGCTATTAAGTCAGTAGATAGACAGCAGGTTATTTCATTGCTGGTAGAAAAAGCCAGCTTTC--TTTTCTCCCCTTTTTATGTGACAGCACTGTAATTAGCCTTAATCAAATACTATTTGTGTTAGGTGCTGTAACTTTGCTTTCTTAGCCAGGAAA----CTCTGCCAATCTAGGAAAAGTAGAAATACAACTTCGGTCA chr4 + 94230402 30611884 30611883 30612281 30611884 30611883 30612281 398 AAAAAATCCAGCCGTCAGTTTGCTTGCTAGCTCTTGCCAATAGGTAC--CCTTTTGTGAGCCTCAAAAATCTGAATTTGCTAGCATTGT----GCTCTAGCTAGAGTAACACTGGTTATACAACTTGATCTTAATTGAAATATTTGGTGCCTGCTGATATGTTCAAACAAATTCACCAGATCTTGATTATGCGCTGGCAATTAAAGCCATTAAGTCAGTAGACAGACAGCGGGTTATTTCATTGCTATTTGACAAAGTCAGCCGTCGTTCTTTCCCCCTGTCTATGTGACAGCGCTGTAATTAGCAGTAATCAAATACTATTTGTGCTAGGTGTTATGAGTTTGCTTCCTTAGCTAGCAAGATACCTCTGCCAA-CTGCGGAACACAGGCATCTGCCTCCGGTCA ..x.....x.x:.:...---.:::x.:x:..::..x:........::--..x...---.....xx....-..x.x....::..x::.:.----....x..:.....:.xx...:....x............:.-.........................................................:x..............:..............:.......:...............:x.x..x....:....:x..--.:..::.....x.:...........:...........xx...................:......:.:.:.x.......:......:..x..:----.........-..:x.:..x::..:x..x::x..:...... 17M3I27M2D6M3I11M1I19M4D40M1I132M2I93M4I9M1D30M 305/384 79.4% 398/94230402 0.0% 21/384 5.5% 109350331 80864224 +17570 chr4 + 190214555 139986430 139986429 139987058 629 TTTTAGTCATTATCACTGGATTAAACACACACAAAACTGATTAGTTCTGGTTGTTATTCATTATTCTCCCACTTCTTGTTTCTAAAAAATCAGCATTACAAACAACTCTCCAGGATCTTATTCCAATCAACCTATCTCAAGTCTTACAATTAATATTC---CTAATATAACCACTACACTGTTCGACTT--------ACTTTTTTTTTTTTTAAGCAATGAAAACCAATGCCAATGAATCATGAATCTCTACAAAAATAGAGGCCAAAGAGGTGAACCGGAGAGCAAACTT-GACATTGGAAAGCAAGAGCCTCCCTTGCCTTCCCCTGTTCACTAAAGCCAGTGGCTCTGGTTAACGCAGGAAACACAGTAAATACACAGTAAATTGTACACACAAAGCAGCCATCGGCAATTTGCCTGGTGGGGTTGGATAGCATGTGGCTGATAGGTCTCAGGAGATGAGGAACAAACAGCCATGATGGATTAAGTGATTGCTATTGGCTGTGTGCTTGCCCTGAATATTTCACCATGGACAGTAATCAATTACTAGAGACCAGTAATGATACCAATCAAATGCACTTAGCACTTCTGCACTATCAACCTGAGGGCTGCCGACCTGCCACTTAGAAAAGGTTTGGGCT chr4 + 94230402 30621971 30621970 30622556 30621971 30621970 30622556 586 TTCTGCTCATTACCATCAGTTTTGA--------GAACTGATTAGCTGTGGTTGTTATTCATTAGTCACA-----------TCTCTAAAATCTGAATTATAAACACCTCTGTGAGGTCTTACTCTAATCAACCTATTTTGAGTCTCGCAATTAATACTAACGCCAGAAAAATAATTGAACAGTGTACATTTAAAGGCCACCTCCTCTTC-------CCACAAAAACCCAAGA---------GTAGATTTTCACGAGAAGGAAGACTCAGGCTACATCC------ACAAACTCCGCCAT-------CCCCAGCATACGTTTCTCTCCCACGTATGCTGCAGTTGGTTCAGGTGGTTAATCCAGGAGACATAATGGGTACGCTGTAAGCTTTAAGTACAAAGCAGCCATCGATGATTTTCCTGATGGGGTCAGATGCTACACAGCTGATAGATCTCAGGAGGACAAGAACATGCAAGCATGACAGATTAACTGGCAGCCATTGGTCGAGTGCTCGCTCTGAATACTCAGCTATGGACAATAATCAATTACTTGGGGCTGCTAATGATACTGATCAAATGTACTTAGCACT-------CGGCAGCTTGAGGGCTACAGTCCTGGCTCTTTGAAAACATGGGAGCT ..:.:x......:..:::.x..x:.--------:..........:.x................x..x.x-----------...xx......x.x....:.....x....x:::.:.....:..:...........:.::.....::.........:.x---.:.:x.x..:x.:.:x..x..x::xx..--------..:.::.:..:-------.x.::......x.x.x---------:.::..:.::..:.:..x::..:.:x.:.xx:::xx.------:......:-.x...-------.xxx...x.x.x..x.::....x:..x::..:x..:::..xxxxx.......:x.....:...:.:.:::...:.x....::.x..x::...............:::....x....:......::...:x:.::::........:.........:xx.:.....x:..:x.....::......x..::x..:.....::.x.....:..:.......:.:x:.:.......:............x.:.:.::x.........::........:..........-------::x..:.:........:.x.x....x.x...x.....x:.xx.:... 25M8D36M11D78M3I28M8I11M7D16M9D37M6D8M1I5M7D283M7D47M 381/574 66.4% 586/94230402 0.0% 67/574 11.7% 109364459 80850096 +3866 chr4 + 190214555 139987882 139987881 139987964 83 CATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x....:.:...........::........x.xx.x...x.:.......:...:..x.xx:.....:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 63954685 NA +3278 chr4 + 190214555 139996921 139996920 139997000 80 GTGGTACGTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGAAGTCAGAGGTTGCAAA chr4 + 94230402 76033201 76033200 76033278 76033201 76033200 76033278 78 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA .....:.::.--....:.::..........::........x.xx.x...x.:........x:....::xx:..:..:.:. 10M2D68M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% 63963720 NA +3033 chr4 + 190214555 140011101 140011100 140011172 72 AAAAAAAAAAAAGTGTGTGTGTATATATATATATATACACATATGTCATATATATTTATATATATGACATAT chr4 + 94230402 77335561 77335560 77335624 77335561 77335560 77335624 64 AAAAAAAAAAAAGTGTGTGTGTATATATATATTTA-------ATGCTTTATG-ACTGACACACTTGACACAT ................................x..-------...::x...:-.:.x.:.:.:x.....:.. 35M7D10M1D19M 52/64 81.2% 64/94230402 0.0% 8/64 12.5% 62675540 NA +3616 chr4 + 190214555 140014118 140014117 140014271 154 TCTTTTCTAGTCAACTTCTTTCTA--------AATTCTTCTAAAGGGCTCATCA---TCTAACACTATTCTGACTTCCCAACACTGTAGTAAAGCAGTAAAGCAATGCCATATGCTCATTTGTTAAGCAGCTTGACATAAATATCCAACCAACCAGAGAGTAGAG chr4 + 94230402 30632185 30632184 30632332 30632185 30632184 30632332 148 TCTTTTCCTCCAAACCTCTTCCTACACCTTTAGATCCTTCTAAGATGTTTATCCGTCTCCCCCACCCCCAAGACCTTGC----CTGCAGCATCGCAGTATAGGAAT-------------TTGCCTGGCAACCTGACATAAATATCCAACCAACCAGCAAATAAAG .......:xx:x...:....:...--------:..:.......::x.:.:...x---..:xx...:x::xx...:.:x.----...:..:.xx......x..x...-------------...::x:...:.:........................x:.:..:.. 24M8I22M3I22M4D23M13D46M 94/137 68.6% 148/94230402 0.0% 28/137 20.4% 109381933 80832622 +3236 chr4 + 190214555 140027602 140027601 140027797 196 AAATTTAATGAATGTGTTGTTTATATCCTTTCCCAGATAATTAATGAAGATGTTAAATAAGACCATGCTGAACACTCGTCCAGATTCAATACATTGCCATTTATCATTACACT---TTCAGTCCTTCAGGCAGTTTTCAATCAATT-----TGACACATTCAAGTCAA-----TTTGAATTCATTTTCTGAACTAGATTTCATGAGACC chr4 + 94230402 41625072 41625071 41625268 41625072 41625071 41625268 197 AAATTTTATTAGTGCCATTTTTACTCCTTCAACCATATAATTAATGATGATGTTAAATAAAACCAAGATTATAGCATATCCCCATGATGTGC-------TTTAACACAACTCCTAGTTTGATCTATTA-----TTCTTAATTTATTAACAGAGACTACTTCAAACCAAACGGGACTGAATTCATTTTTCAAGCAAGATGTCTTTGGACC ......x..x.:..:xx.x....:x:.:.:xx...x...........x............:....x.x.x.xx:.x::...xx..xxx:.:.-------....x..:x..x.:---..:::..:x.:.-----..:.:...:x...-----x...xxx.....::...-----x:............:::.:.x....x..x.x:.... 92M7D14M3I12M5D13M5I17M5I36M 119/184 64.7% 197/94230402 0.0% 25/184 13.6% 98402530 91812025 +7338 chr4 + 190214555 140029593 140029592 140029865 273 AAACTACAGAAAAAGAGGG-----------CTTATTACTATATTAGTAAGCATAATACTATTTATAAATATTACATCTATC----ATTTCAATTTTATGTGTCTTCTAAA-AAGACTGAAACAAGTCACCCATAATTATTACATAAATGCCACTTTTAATATCAGCTTAGGAAATATGTATATTTTTCTTTCAAAACTACCATAAGCAAAGATGCTAACATTTTGTTTTTTAAAATTCGTACA------AAATAAATCTATCCAAAGCTTTTGGCCACACACCCATATTTTAACC chr4 + 94230402 30639047 30639046 30639331 30639047 30639046 30639331 285 AAACTAGAGAAAGCGAGAGTGAAAGAACTGCTCATTATTACATTAGCAAACCTAA-ACTATTTATAAGCACTACATCTATCTATCACTTCAATTACATGT---TTCTAAATGAGGCTGAAGCAAGATATCCATAATTATTACTGAAATGCCATTTTT-ACATTAGCCCAACAGTTGTGTGCGTTCCTCGC---AAAGTGTTATAAGC-AAGCCACCGATTTATTACTGTATGGAAATTACACACAGATTAATCAAATCTAAACACCTCTTTT-GCAACAGATTTGGTTTCTAACC ......x.....:x...:.-----------..:....:..:.....:..:.x...-...........::.:..........----.:.......x:....---.......-:..:.....:....x:.:.............xx........:....-.:..:...::.:x.:x.:...:::..::..x:---...x.:::......-...x::.::.:x.x..::.x.x.::..x.:::...------..x:.......xx..xxx.....-..x...x.::::xx..:..... 19M11I25M1D25M4I15M3D7M1I46M1D32M3D14M1D35M6I23M1D22M 184/263 70.0% 285/94230402 0.0% 32/263 12.2% 109390546 80824009 +21922 chr4 + 190214555 140037336 140037335 140038179 844 TAGCACA--TTATTATCTTTCTGCTCTAAAACTGGAGTTTGCACTTTAAATAGAGATTTCAATAAATTAATGCATTAGCTACAAAGAAA-TGGACTCAATTTAAATGACTAAGCAAGTGACCTGAATATTATTTCCTTTAAATAGCCTGAGCAACATGAAAAGAAAATACA----AAAAGGAATCTGAGTAATGCCCTATGTCTACAAGATTCCATCTAAGTAGAGCATGTCTCCCACAATGTGACTCACAGGAGGCCTGCAGCTTCAGTTTTGAACAAACAAACGCACGTCTTCATTCAGCACA--AAGCTAACTAGTGTTAGTT---ATACAGCTAACTAGTTATGCAGGCTATCCATATTTACATAATCAGAAACACATTGCTTTCAATAAGACAAGGCCCAC-TGAGTTACATATGACCCTAAGGTACGTGTATTTCAACGCATGTTAAACTGTACTTTTCAGAA-----------------------------AATCATTTT---GTTTAACAAACTCTCAGCAGGCACCCTGATTAGACATAATCT-ATAAGGGCCCTTTGTCTCGAGCTACACTGCTCTGCTGTATGGGGCTCTCTTTGTGGTGATAATTGGTTTGGCTGTCCATTCCACCCATCAGGTGATAGAAAACTATCAATCAGCCTAAATGCAATGTGAGAGAAGTCTCGTTAGCCAATTAGTCAGTAATGAGAACATTAGCTAAGATATCTTCTGCAGAGGGCACCTTAGCCATTCCACT--AGTCTGAGAAGATGACAGTCC---CTATGTGATTAATAAAGATCACAGGATACTTCAGAAATTCTACATGGGTGAAGAAGAGAGTCAGAAAGAA--ATGCACTCGGAAATGCTGACTGTTTCTAGTGCTGC chr4 + 94230402 30644168 30644167 30645015 30644168 30644167 30645015 848 TAGTACAACCTGTTCTCCCTCTCTCCAGAAAGCTGTCTTCTCATTTCAAGGAAAAGGCTTCAAAAATAAAAGCGCCAACTACAAAGAAAACACTTTCCATCTCAATTACTGCACAAAC------------ATTCCTTCAAAACGGTTAGAGCTACATGAAAGGAAAAATAAGCGCAAAAAGAATTTGAATAATGCCCCGCGTGGAAGGATTGCTATCTCAATAGCACATGCCCAGCAGGTTTGGAGTCACACGGCTCTGCCAGGTATGAATCTCGGCAGA-------ACGCTGCCTGTTAGCACCTCACGATGCCTCTGGTTGGTTTGAACACACCTGCCTCACACGTCAGGTCAC-----GGCACGGGAGCCCTGACACAAC-CCCGGAGCAGAACAGGGCTTGCCTGACTTGCAGAA-----------------ATTTCAAGGCACTCTCAGTTGTGCTCTTCAAAACGAAACAAAACAAAAAAACAGAGGGAAATAATCATTTAACAGTTTAACAAAATCCCAGCTGGCAC--TGACTAGACGTAATCTTATCAGGGTCTTTTGTCTCTGCCTGAACTCTTCGG--GTATGTAGCACTCTTTGCTGTGATAATTGGTTTGGCTGTCCATTCCACCCATCAGGTGATAGAAAACTATCAATCAGGCTAAATGCAATGTGAGAGAAGTCTCTTTAGCCAATTAGTTGGTAATGAGAACATTAGCCACTGTATCTTCTGCAGAGGGCACCTTAGCAATTCTGGTGGAGCCCACGAAGATGACAGTCCTATCTGTGTGATTAATGGAGATCCTGTGACACCACAGGAATTCTGCACAGTTGTGTAA---AGTCGGGGGGAACGATCCACTTTACGCTGTTAAATATTTTAAGAGCCAC ...:...--:.:..x..::...x::.x:...x:x.xx..:x..:..:..:x.:.::x:.:x.x....x..x..:::.:...........-::xx:..x..:.x...x...:x:...::------------...:.:.:x...::.::x....x........:.....xxx.----....:....:...:........:::..xx.x:::x.x.:....x.:...x:....:.:xx..x:x.xx..x.....x.:xx.:xx...x.x:::x.:.x::..:.-------...::x:.xx.:.....x--.x.x.:x..xxx...:...---.:...x..:x..x::xxxx....::.:-----xx:..:x:.x.xxx:.....x:-.::xx.::.::...:...:::.-...x..:..x.x-----------------.......x...:x:.x.::...:..:....:..-----------------------------........x---..........x..:....x.....--...:.....:......-..x....:.:........x:x..:x...x:..x.--.....x:..x.......:x..........................................................x.........................x.............::.................:.xx:.........................x....::x.--..:.::x..............---..:..........::.....x::x..:..:x...:......:..::.x..x:x..---....:.:::...--..x....:x:x:x..:.:.x.:...:x..x..::. 7M2I80M1I28M12D41M4I105M7D18M2I19M3I27M5D22M1D22M1I12M17D33M29I9M3I24M2D16M1I34M2D175M2I21M3I55M3D12M2I35M 539/795 67.8% 848/94230402 0.0% 102/795 12.8% 109393168 80821387 +3265 chr4 + 190214555 140042505 140042504 140042563 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAAAATCGCTTGAACCCTGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx:x:..x.:.........x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 64009299 NA +9757 chr4 + 190214555 140049079 140049078 140049464 386 CAGTTTGGGG------GCAGAAAGAAGCGCATC--------TGCTGCTCTGTGATTGCACAAGAGAAGCTACCAC-TCCTTTTCTTCACAAAGAAAAAAAAATGGCATTTATCGCAAGTACAGCAAGGCATATTAGGATTCACCTCCCCCATTCTTTCTTCCCTCTTCCTCCTACCATCTCCCTCGCCGCCTCCCTTTCCTGTTGGAAAAGAAAAGGTGGGAGGGAGAGGAGGACCCACCGGTCACAGACAACGCTGTGGGATTCTCTTTCTTCAGCTTTTACCAGCCTATGGGGGTCAGGATGCTATTGGTTCAGCTTTATGTGTGATATGGTGCCTCTCACTTAGCAACAGCGAGCAGGAGAGGCAGGAAGCAACGCCACCTGGCTCAGCAAGTGTGCG chr4 + 94230402 30648453 30648452 30648813 30648453 30648452 30648813 361 CAGCTTGGAGCTCACGGCACAGGGAAAAACATCCTTGTCCGTGCGTGCCTGTAAATACACCGGAG----CATCATATTCTTTCCTTCCCCAGGTATCAG----TGCATTTATCTCCAGGACATGAATGGCTACTATGAATTATCTCCACCAC------------------CCTGCGCTCTCCCTCACC------CTTCCCTGT-----AAGTGGGGGGGGGAGGGAGGAGGAGAGCAA---AGAAAAGGCGGCACCGTTGGATTCCCTTTCTTCAGCCTTTACCAGCGTGCGGAGGTCAGGATGCCATTGGCTCCGCTCTGCGTGCGAGCTGGGGCTGTTCACTTAGCAACAGAAAGCAGGAGCGGCAGACAGCAGAAGCGTGCAGCGAGGCGTGCGTGCG ...:....:.------...x.::...:x:....--------...xxx:....:.x.:...x:...----:.:..:-.:....:....x.x.:.x.xx.:----x.........x.x..x...xx..x.xx..:..x..x.:.:....x...:------------------...:.xx........:..------...:.....-----...x:::..x.........::.::..x.x.---:xx.x..:.::.:.:..x......:...........:.........x.::..:...........:.....:..x...:.::...:..xx...x..:x:..............x:........x.....:x....:x:x.::x::..xx:..:x.:..... 10M6I17M8I24M4D6M1I23M4D49M18D18M6D9M5D30M3D160M 236/346 68.2% 361/94230402 0.0% 55/346 15.9% 109400626 80813929 +3587 chr4 + 190214555 140051417 140051416 140051499 83 CGTGGTGGTACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....:..:.--....:.:...........::........x.xx.x...x.:......:....:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 64018220 NA +4919 chr4 + 190214555 140069314 140069313 140069701 388 TCTGTCCAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGG---------AGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAAGGAGGAGAAGGAGG-AGAAG----GAGGAGAAGGAGGAGAAGGAGAAGGA--------GAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGGAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAGGAGAAGGAG------------AAGGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAGAAG chr4 + 94230402 24794103 24794102 24794513 24794103 24794102 24794513 411 TCTGCTGAAGAAAGGGGATACAGAAAAG----AGGAGAACAAGCAGCTCTCATGGCAGAATAGCACAAGGAATAACAACCTATACGGGTTGGTAAAGGAATAAAAAGGACCAAAATAGAAGATGGGAAGAGAGGCAGAAGCTTGGTGAAGTAGTCAGAAAAGAAGTAAGACCCATTACGAAAGAGTGGAGAAAGAAAAAACAGAGTG-AGGAAAAGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGAAAATGATAGTAGAAAAA------GGCACTAAACAATTAGGGTTAAAAAGAAACAAGAAAGAATAAGAGGAGCTTGAAGGGTAGGCAGGCCAACATTATTAAGTGGGAAGAAGCAAAAACTAATATGGGTACAGAAGGGAG ....::x.....:::...x.x:..:...----.......x:..x..x---------....x.:x.x:.:...x..x..xxx:x.x.:.xx..x::....:x.::.:.::xx::.:x:....:x..::.::....-.....----.x.:..x..xx:..:...:..x.:..--------.....::x.:....:..::.::x:...x.-....::...:x..::..::xxx:.....:.:....x..:...:.x:x::.....:.x:x......:x..xx..::.:x::x..x..:.::.------..x:xx.:.x:.xx.:.:xx.........x.........x....:..:xxx.:...:x.:.x..------------...x:.:.....:x...:.xx..x.x:.:x.x.::.:.:.. 28M4D15M9I78M1I5M4I26M8I29M1D91M6D64M12I41M 217/377 57.6% 411/94230402 0.0% 45/377 11.9% 115275211 74939344 +6629 chr4 + 190214555 140069359 140069358 140069739 381 GGAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGG------AGGAGGAGGAGGGGAAGGAGGAGAAGGAGGA----GAAGGAGGAGAAGGAGGAGA--AGGAGA------------------------AGGAGAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGGAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGA-GGAGGAGAAGGAGAAGGAGAAAGAAAGAAAGA---------AAAAGAAAGAAAGAAGAAGAAGAAGGAGGAAGAAAGAAGAAAGAAGAAGGAGCCGGGATG chr4 + 94230402 1818560 1818559 1818985 1818560 1818559 1818985 426 GGAGTTGACGAAGGCCAGGAGGGGGCTGGAGCAGGAGGAGGGACAGGTGGCCTTCCAGAACCCTGTGGGGACACACGGACATGAGGGCATTGAAGGAGGCACCGCTGGAGATCAGAAGACGCCCTGACTGCACCCAGCCCTACAGGCAGGAGGGAGAGTAAGCAGGAGGATATGGGAATGGAGAGGGGTTGGAAGAGGAGGAGTAGGAGACA-GAGGTGGGATGAgatggagatggggatgggacagtgataaggatggagatggtgacggggatggggatgggaatggagaaggagaaggggatgggatgttgatggaatgggatggggttggatgggatggggtaaggcagggagatgggtttggagatggaatgaagatggggtgggatgagatcgagatggggaatgagatgggatggggatg ....xx..x....:xx.:..:.::.xx....x.........::x...x..------..:.xxxx.x.....x:x.x.::x.x....:----........x:xx.xx.....--..:...------------------------...x:::...:...:x...x.......x:x...:.x.::....:.xx...:...:.....x......x.-..:.x:.:.x...:x....:x.....x.:.:x:.x.:x:....x.::..x.:x..x.:...x.:...x.:::.x.:.....:.:...::::x:.:.x.xx..x.:.:x:...-..:.xx.:.x.:..x..:.x...:x..::...---------.:.x.:..x:....x.::.x:.:.x...:xx..:.x::.:..x:...x..:::x...... 50M6I31M4I20M2I6M24I69M1D112M1I32M9I60M 228/380 60.0% 426/94230402 0.0% 47/380 12.4% 138250799 51963756 +3768 chr4 + 190214555 140069487 140069486 140069673 187 GGAGGAGGAGGGGAGGAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGGAGG--AGGAGGGGAGGAGG----------AGGAGGAGGAAGAGG---------AGGAGGAAGAAGAAGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAGGAG-AAGGAGAAGGAGAAAGAAA chr4 + 94230402 70384266 70384265 70384474 70384266 70384265 70384474 209 GAAACAGCAGGGGAGCAGCCGGCAGAGGGATGGAGGAGGAAGGGGCATGCAAGGAGCAGGAAGAGGATCAGATGAGGAGGACAGGAGGGACAAAGGTAACGCATGTATGAAAAGGAATATATGTTCTCACAACAGAGAGACAGGGAGGAAACTGAGCAAATAAAATACAAAAAGAAAACAAATCCAGAGCAACTGGAGGGAAAAAGAAA .:.:x..x.......x..xx..x::...::x:..:.::.....:.x.x.x...:..x....:.....xx..:x.......--.......:x::...----------.x..::.....x.x:---------.:x..::...x:::..:...:xx:.:x...x..:.x.x..:.....:.x::.xxx:...-..xx:..:...:....... 80M2I14M10I15M9I59M1I19M 116/187 62.0% 209/94230402 0.0% 22/187 11.8% 69685221 NA +4039 chr4 + 190214555 140069510 140069509 140069696 187 GAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAGGAGGAGGAG-----GGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAGGAGAAGGAGAAGGAGAAAGAAAGAAA--------------GAAAAAGAAAGAAAGAAGA chr4 + 94230402 32265470 32265469 32265662 32265470 32265469 32265662 193 GAGGGTGGTGCTGGATAAGGGGGGATGCAG--GGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGA-----------ATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA ..:..x..x.xx...x....:.::.x.x..--.:..x.x.::......-----.x......x:x......:....xxx.:...:.:...-----------.x.x.x:x.x..x::...:.....:.:...:..::::::...::.:.:.......:..x:.x.:.....x.::--------------....x...:.:....:... 30M2D16M5I36M11D73M14I19M 112/174 64.4% 193/94230402 0.0% 32/174 18.4% 107804040 82410515 +3470 chr4 + 190214555 140069609 140069608 140069744 136 AGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAG---GAGAAGGAGAAGGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAGAAGA--------AGGAGGAAGAAAGA--AGAAAGAAGAAGGAGCCGGGATGCATTT chr4 + 94230402 49044692 49044691 49044840 49044692 49044691 49044840 149 AGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAATCCCTATGCGTTT ....::.x..:x..x:.....x.xx...x:::.:.:...:...---:....:..::.:::.x:.:...x:..::...........x....x....:.--------....:..:.:..:.--..x..x...x.x:.::.xxx....:... 43M3I51M8I14M2I28M 87/136 64.0% 149/94230402 0.0% 13/136 9.6% 91024917 NA +3371 chr4 + 190214555 140069614 140069613 140069682 69 AAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAGGAGAAGGAG--AAGGAGAAAGAAAGAAAGAAAA chr4 + 94230402 66803524 66803523 66803594 66803524 66803523 66803594 71 AAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAAA ..::x.:........:...:...........::......:.x..x..--.......:.:x.:..x.x.... 47M2I22M 52/69 75.4% 71/94230402 0.0% 2/69 2.9% 73266090 NA +3050 chr4 + 190214555 140069633 140069632 140069702 70 GAAGAAGAAGAAGGAGGAGGAGAAGGAGAAGGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAGAAGA chr4 + 94230402 94050834 94050833 94050903 94050834 94050833 94050903 70 GAGGAAGAGGGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAA ..:.....:.:.::..:.....:::.::..:..x...:.:x.:.x.x...:.xx...:..........:. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 46018799 NA +3402 chr4 + 190214555 140072530 140072529 140072630 101 CATGGTGGCGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGATTGTGGTGAGCCAATATCGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:..::.--....:.:...........::........x.xx.x...x.:........::.:..x:xx:.::...:.------..:..x:..... 14M2D67M6D12M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% 64039333 NA +3417 chr4 + 190214555 140074128 140074127 140074262 135 AAAAGAAAGAAAAAGAAAGAAAGAAAGAGAGAGAGAAAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAGAAAGAA---AGAAAGAAAGAAAGAAAGAAAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 31013893 31013892 31014035 31013893 31013892 31014035 143 aGGAAGAAGAAAAAGAAAGATAGAAAAAATAATTGAGTAGACAAAAGGAAAGATTTGTTGGAACTGAGGAAGTTAAAGAAATCATACAAAAACAAAGCAAAAAATGAAGAGGACTGAAGGAAAAATAAGGCAAGTGAGAAAGA .::.::..............x.....:.:x:.xx..:x:..x.:..:......xxx:xx.::.xx:..:...xx......---.x.x.:...x....x..:...x:....-----:.:::.:...x..:.x...x:....... 80M3I27M5I28M 86/135 63.7% 143/94230402 0.0% 8/135 5.9% 109060235 81154320 +3501 chr4 + 190214555 140074164 140074163 140074292 129 AAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGACATGTGTACTATGAGGGAGAGGGTCAT chr4 + 94230402 51148381 51148380 51148506 51148381 51148380 51148506 126 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGA--AATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCAT-TTTGAAGCATGAAGGAAGGGAGCGT ..:...::.:xx.x.....................x....:xxx....xx:.--..x.:..x.x:..::.x:...:.:...:..:....:::..::.x..x.:-.x..x.x:....:...::..:x.:. 52M2D49M1D25M 80/126 63.5% 126/94230402 0.0% 3/126 2.4% 88925783 NA +3137 chr4 + 190214555 140074170 140074169 140074263 94 AGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 51148379 51148378 51148474 51148379 51148378 51148474 96 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGG ........::..xx.x.......:...:...:.:.:.x....:xxx....--::..x.:..x.x:..::.x:...:.:...:..:....:::..:. 50M2I44M 60/94 63.8% 96/94230402 0.0% 2/94 2.1% 88925791 NA +3127 chr4 + 190214555 140075113 140075112 140075232 120 TATCATCTCATTTAATGCTCATAACATTTCTGTGAGGCAGGTTATTAGTGCCAATTTATCCATAAGAAGGCTGAAGTTTGGGAAATTTAAGCTATTTGGCCAAGGTCACATTGCTAGCAA chr4 + 94230402 82320725 82320724 82320843 82320725 82320724 82320843 119 TAACATCCC-TTTAGCCCTCTTAACACCTTTCTGAGGTAGGTAATTCTATCCATATTAGTGATGCATAAGCAGCAGCACAGAGAAGTTAAATGGCTTGCCCAAGGTCACGGTGCCAGAAA ..x....:.-....::x...x.....::.:.x.....:....x...xxxx...xx...x:x..:x:x.:..x.x..:x::.::..x....::x::...x..........:x...:..x.. 9M1D110M 74/119 62.2% 119/94230402 0.0% 1/119 0.8% 57754388 NA +3388 chr4 + 190214555 140077878 140077877 140077960 83 CATAGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCCCAGGCAGGAGAATCGCTTGAACTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:.--...x......:.........:.::....:x..x.xx.x...x.:.......:...:..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 64044681 NA +9929 chr4 + 190214555 140081743 140081742 140082223 481 ACTGCACAACACCAGAGGATGTGAACCGTCTAGGCTGCCCGTAGATCTCCATAAACAAGGCCTCTTCCCATCAAAGGCCACTGTGGAATGTAGCTGGAGTTGTTTATGCTTCTTTCTTTTTCTATTAGGTTTATTTTCCTGATGTTAAACCCTGTCAACTTTACTGCCCAGAAACCTATCTTCAGAATAGGACCTTCTGCTTTGAAGACTCCTTTTAAGAAATGTCAAGGGGCAGTAAACATAAAATAGGATCCATAGCACCACCAATGACACAAAAACAGGGCCAAAGCTAATCAGTCTCCTCCATAAAACACACACTCAGTCTTTTCTCCCTCTCACACACAGTAGCAGACCAATAAGATCTGCGGAGTGAATGTAAGCAACAGAGTAGGAAGCAGCTGAAAAGAAAGAATTCCTGCTGCGTTCTCCCCTTGTGCCTCTTTCACAGTCAA-AGGGTTCAAGGGAAGAATGTTTTATTGCA chr4 + 94230402 30665647 30665646 30666082 30665647 30665646 30666082 436 ATTCCTCAGTCCCAGGAGAAGTGCAGCGCGTGCCCTCCCTACA----CCAGCAAACAGGGCATATCGTCATCAAACGTCCTTG---------GCTGGAGTTGTTTGAACTACCG-CTCCTTCTCTTGGATTTACATTTCCCACACTAAGCCTCTCCTCACTTACTGCC-AGGTGCCTTTCTGTAAAATGGCAAGTTTTGCTTTGAAGGCCCACTCCAACAAGTCTACAGGGGCAATAAAGTTAAAGCAGAAGCCATGGCA--ACCAG-------------GGGATAAACCAAAGTGACTGCTCCCATAGAAAAAAAAAT-AGCCTG---------------AGAGTAGCTGGCCAATGGGATTTGCTGCACAAGCATAAGAAGCAGACTGGGGAGCTGCAGAATATAAAGAATTCCTGCTGTGTTTCCCCAGTGCATCTCCTTTATATTCAAGAGTGTTCACTAAAACAGTTTCTGAATGCA .:.x.x..::x....::..x...x.x..:x.:xx..x..:::.----:.x::.....:...x.x.:x:.......x.:.x:..---------.............:x:..x.:x-..::....x..:.:....:x..:.:x.:::...:..::x:.xxx:........-..:x:...x...x:.:...:.x.xx..:..........:.:.x:.::..x..:.x.xx.......:....xx....::..:.x....:...--....:-------------...x:...x.x..x:::::x.::.....:..x.x.x.x.-..:..x---------------.x......x.:.....::...:...x.x:::.:::....x.:....x.:..:...x..x...x.x...............:...::...xx..:::...:..:.:.x....-..x.....xx::..x.:.x.:.x.x.... 43M4D36M9D22M1D53M1D91M2D5M13D39M1D6M15D111M1I29M 275/435 63.2% 436/94230402 0.0% 47/435 10.8% 109416096 80798459 +31169 chr4 + 190214555 140109651 140109650 140110337 687 ACAGAAAGCTTTCCTTCAACTAGGCTTGCTTTTCTCCAGCTGATCCTATAAACACTGCTGGCAATTTTTTCCCCAATGCCTCTAACATATTTTCACTTAGCACCAGTTTGATGTATAAGATCTGACAGCCCGGCAGTTATAGGCCACCTGCATCACTGTCGCCATGACAACAGTGAAAGACAATCCATGATCCCATGCCCTGGTCACACGTTTCAATACAGCTTATCTGTCCAAAGCCACTGAGTCTAATGGAAGAGAGTAATTACCATCTTCCACTCATTGTCAAAATTCCCACCATATAATGCTCTTCAAAATTATTTTATTCCTCTCACATGGCTGCTTTGCAAAA--------------------------------------------------------------------------ACTA-----AAAGGAATCTTAAGT-----------GGAAAACGGGGTGGGTGG---------GAGAAAGAGGAGGCTGTGACTG--GTATAAGTGGAGCCGCCTGTGCGTGAACTGTCCCTTTGCAG-----------CCAAC-----------GAATGCACCAGCCAGCAAGAAGGATACATGAACAACTCTAGTTCA-GCGATGATCATCTC--AAGATTTTT-------------TAAAATTTGAGTAAGGAAATCAGACGGTAAAATGTCCTAGTTT--TTGGCCTATTCTAAAGGCATTTCATTACTACCAACAAAACGCTTGCACAGGGGCAATGAGCCCCCTACGACTGCATGCAGCAGGCACAGCGACACTGCACAGTGCAACGGTTCAGGCAAGTG chr4 + 94230402 30682961 30682960 30683761 30682961 30682960 30683761 801 ACAAAAAGCTGCTTTTAAAGCTGCCTAGCTCTCTTCCACCTGATCCTATAAACACTGCTGGCAATTTTTCCCCCTGTGCCTCTAACATATTTTCACTTAGCACCAGTTTGATGTATAAGATTTGACAGCCAGGCAGTTATAGGCCACCTGCATCACTGTCGCCATGACAACAGTGAAAGACAATCCATGATCCCATGCCCTGGTCACACGTTTCAATACAGCTTATCTGTCCAAAGCCACTGAGTTTAATGGAAGAGAGTAATTACAATCTTCCACTCATTGTCAAAATTCTCATCATATAATGCTCTTCAAAATTATTTTATTCCTCTCACATGGCTGCTTTGCAAAAGGGAAAAAAAAAAAAaaggaaggaaggaaggcaggcaggaaggaaAGGGAAAAAAAAGAAAGAAAACAACAAACACCATCGCGAAAGAAACCCTAAGTGGGTTTGGGAGGGAGCAAGGGGTGGAGGGGAAGGAGGAGAGGAAAGAGAGGCTGTGACTGCCTCAAAAATGTAGCAG--TGTGAGCAAACTGTCTCCTTGCAGCGTTTGAAGGACTAATCAGAAGAAGGGGAATGCACCAACCACTAAGAGGGATAAATGAAAATTTCTCTTCCATTCGTAGAGCGTCTCTTAAGACCCCTTTCGGCTTTGCACTGAAGGTGAAGAGAGGATATCAG--------CTGCCCTCTTTTCCCCCTCCCCTTCCTGGAAAACTTC----TTCCTATCAAAATG-------------AAGGAGCCCCTTACCGCACCAAGCGGCAGCAACAGCTCCACTGAGCAGCATGGCTCTTCAGATGAGTG ...:......x:::..x..x:x.x..x...:.::....x..............................:....x:.............................................:........x..................................................................................................................:....................x........................:..:......................................................--------------------------------------------------------------------------..:.-----....:..:.:.....-----------...:x.x.......:x..---------...:..:::.............--x:.x..:..x...x.--....x.::.......:.:......-----------.:..:-----------..........:...x:....:.....x.....x.x:...xx.:..-x..xx..x.:....--....::::.-------------.:..:x.x:..x:....x.....--------x..:...xx...--::xx..:x...:x::::x.:...----:.x.:.x.....:.-------------..x.......:...x:.xx..x..:....xx.....xx.....x:...:::::.xx.....:::.... 349M74I4M5I15M11I18M9I22M2I15M2D24M11I5M11I45M1I14M2I9M13I23M8D12M2I23M4D14M13D68M 535/660 81.1% 801/94230402 0.0% 168/660 25.5% 109426690 80787865 +3353 chr4 + 190214555 140119585 140119584 140119641 57 TTTTTTCCCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTTCCTTTTTTTTTTTAGA chr4 + 94230402 92530567 92530566 92530623 92530567 92530566 92530623 57 ttcctttTCCCTTACTCCTTCCCCCTTCTCCTTCCCCCCTACCTCTTTTTTTTTAAA ..::..::....:x....:....:.:::.......:....x...:..........:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 47589018 NA +6127 chr4 + 190214555 140120254 140120253 140120414 161 AAAGCTAACCAAAGTGTGACACCTACAATGTGAATCTGAGTGCCTCCCCTAATGAGTAATGAGCAGTATTAAATTACAGGTTACTACTGATACCATATACAAAAAG--------------CTAGATGATGTCTTATAAAAGTAGTTATTAACCAAAGACAAATTAACAAAACCTT chr4 + 94230402 30688712 30688711 30688886 30688712 30688711 30688886 175 AAGCCTGACTAAAGGGAAACACCTACAACATGAACCTGGATGCCTTTGCTAATGAGTAATGAGAGGTATTAAATTACAGGCTGCCAAAGACACCTCCCCTGGAAAAGCCTAGCTTCTACCCAAGGTGAAGACTTATGCAACAGGCTGCTAGCTATGGAGAAACCAAAAAAACCTT ..:x..:..:....x.x:..........::....:...::.....::x...............x:...............:.:.:.xx..:...x:x:x:::...:--------------.x..:...x.x.....:x..xx:.:.::..:.:.x:..x...::..x........ 106M14I55M 109/161 67.7% 175/94230402 0.0% 14/161 8.7% 109431542 80783013 +3848 chr4 + 190214555 140125295 140125294 140125370 76 CAGTGGTACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGC chr4 + 94230402 76033199 76033198 76033272 76033199 76033198 76033272 74 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC .......:..:.--......:...........::........x.xx.x.:.x::.....:.....:..:..x:... 12M2D62M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 64092096 NA +3923 chr4 + 190214555 140129834 140129833 140129894 61 GTGCACCTGTAGTCCCAGCTATTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:.......:.:..:........x.xx.x...x.............:.. 61M 50/61 82.0% 61/94230402 0.0% 0/61 0.0% 64096630 NA +3712 chr4 + 190214555 140139133 140139132 140139233 101 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTCAGGAGACTGAAGCAGGAGAATCCCTTGAGCCCAGGAGTTGGAGGCTGCAGTGAGCTAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:--....x......:.........::::..:....:x.xx.x...x.x.....:.....:..:.xx:.....:..------..x...:..... 9M2D72M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 64105936 NA +3726 chr4 + 190214555 140140184 140140183 140140266 83 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAAGAGAATTGCCTGAACCCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........:.:.........x.xx.x...x::.:.........:..x:xx:..:..... 9M2D72M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 64106987 NA +3729 chr4 + 190214555 140154101 140154100 140154145 45 AACTGCTCGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTCTC chr4 + 94230402 91075696 91075695 91075740 91075696 91075695 91075740 45 AACCTCTCGCCGCCGCCGCCGCCGCCTCCTTCTCCTCCTCCTCTC ...:x.....................x...:.............. 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 49078405 NA +3204 chr4 + 190214555 140154108 140154107 140154169 62 CGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTCTCGCTCCTCCACCTCCTCCTCCTCCT chr4 + 94230402 18853138 18853137 18853199 18853138 18853137 18853199 62 CGCAGCCGCCGCAGCAGCCGCCTCCTCCTTCTCCTCCCGTCCCAGGCCCCGCTCCCTTCCCT ...x........x..x.............:......:..::..xxxx..:x....::::... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 121300970 68913585 +3124 chr4 + 190214555 140154111 140154110 140154143 33 CGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTC chr4 + 94230402 91075703 91075702 91075735 91075703 91075702 91075735 33 CGCCGCCGCCGCCGCCGCCTCCTTCTCCTCCTC .......................:......... 33M 32/33 97.0% 33/94230402 0.0% 0/33 0.0% 49078408 NA +3481 chr4 + 190214555 140160870 140160869 140160934 65 TGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTCTCTTTTT---------TTTTCTTTTATTTTAAGTTCT chr4 + 94230402 41434315 41434314 41434388 41434315 41434314 41434388 74 TGTCTGGGTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCTTTTCCTTTATATTTT ..:x..x..:.x...........:....................---------...:.....x:....x:..:. 44M9I21M 53/65 81.5% 74/94230402 0.0% 9/65 13.8% 98726555 91488000 +3246 chr4 + 190214555 140165838 140165837 140165917 80 TTCTATTC-TTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCACGCGTGCATGTGCACACACACA chr4 + 94230402 85834530 85834529 85834610 85834530 85834529 85834610 81 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ..:.....-...x...x.................:.xx:...:x.::.:.::::.::x.::.:..:x.:........:... 8M1I72M 54/80 67.5% 81/94230402 0.0% 1/80 1.2% 54331308 NA +3111 chr4 + 190214555 140165857 140165856 140165915 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCACGCGTGCATGTGCACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx...:::::.:::....:.....:::...x...:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 60900338 NA +17015 chr4 + 190214555 140185831 140185830 140186368 538 ATATATGATGGACTTGCTGATGTCAGCCGCTGAAAACTAATGC-TGCTGATATCAGCTGACAGGACTCTAATTACTAGTTAT--GTGGCTGTTGCCTGCTTAAGAAGCTATTCAGTGAGTTATGATTTAGAAAAGCTGGAGAGCACAGGGCTGATTTGTGAAGAGATATCTAATATGAAAACACCACAGAAATTCTCAGATTGATCCTCACGACAGAGATCTGTCTAATTAGGAAGTGTCTATTTTAATACTAAACCACAAAAAAGCCCAGCT-GGAAAAGAATTTATAGGAAGACACGGAACCATCACTAGTTCGGCTGACAGCAAATGCAACCTAAGCATGTT----------------------------TCTCAGCGTTTAATCAATAGTAGCGATATAGGACAATTACTCCCTTACAGACAATCCATCTCGTCCTATCAAGAGGGAAGGTCTTCACAGGTGATCTGGA-----------TGGAGAATCCCTAGCCAACACCACTTCCC--TTGCCTCCGGGGTTGAGGACTGCCTAGAAGCTAGACGCTTACTAGAGTATCACCGAAAAGACAGCAGA chr4 + 94230402 30710464 30710463 30711040 30710464 30710463 30711040 577 ATAGGTGGTGCACTCGCTGATGCCCGCAGTGGAGCGCTGATGCCTACCGGCAGCGGTTGGCAGGGCGCTAATTGAGGGTTACAGGAGATGATTGCCTGGTAAAGGATCCATTCAGTCAGTTACGATTTGGAACAATTACAAAGGATGGGCCTGATCTGTGAAAAGAGACGCGATATGAATATACAGCATGCGTTCTCAAGATGATTATCATGACAGAGATCTGTCTAATTAGGAAGGATCTATTTTAACGCTAAGAAATGAAAGAGCCCAGCTGGGAGAGGAATTCAGAGGAAGATGCAGCGACACGACT-GCTAAGCTGACAGCAAATGCAGCCTAAGCGTGTTCCAATGACAGCTTCTAAAAAAAAAATCATCTCAGCATTTAATCAATAGCGGC--TTCGGAACAAGTAGAGCCCCACAGATAACCCAGCTAGTCACAGC-AGTGGGAGGAGCTCCGTAAATAACATAGACAATATGTATCTGCAGAGCGACACTCTGAAACCACTTCCCCTTTGCCGGCCGAGTTACGG-CTATCCAGTAGATGGGCAACATTAAAAGTAGC-CCGAGGATAGAGCTGA ...x:..:..x...:.......:.x..x.:x..:x:..:....-.:.:.::.x.:.:..:....:.x......:xx:....:--.x.::x:.......x.x...:.x.:.......x.....:.....:...x.::.:x.:..x.::..x.....:......:...x.:x::.......x.:..x:..x:x:......::x....:x...:.........................x:..........::....:xx.::...:.........-...:.:.....:.x.......::.:.x:x..:x...-.:.x:................:.......:....----------------------------.......:............::..--.x::.:....x..xxx..::.....:..:...x..x...x:.x.-..x....:.:x..:.::.::.:.:x.:..-----------..x...::xx.xxx.::.x..........--.....xx.x.:...:x..-..::.:..x..x.:.:.:x:xx:x.:....x.-....::.x.x...x.. 43M1I38M2I189M1I36M1D34M28I24M2D44M1D29M11I29M2I18M1D32M1D16M 361/532 67.9% 577/94230402 0.0% 51/532 9.6% 109475367 80739188 +3085 chr4 + 190214555 140224836 140224835 140224905 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 64191639 NA +24988 chr4 + 190214555 140225633 140225632 140226754 1122 AAAAATAGCAGGTTCGTCTTCGACAGTGGCACAGGATAATGCATTATTTG--TTATCACTGTTCAATCAAAAAGTGCATGAAGGATACACATAATTCATCTAGACAGCAATCACCATGGAGTTATGCAGGTCTCTTATGTAGGTGATGAAACAGCCAAATTCCCTGACAGTGGTGAATTATTCCTCATGTCACTAATAGCGATGCCAAAAGA---AGTGTCAAGGCCACAGACATGGAGAATG--GGGGGCTCTTCAAACTGCTCTAGTAAAAATTTGATATGTTTTATTGCTTTCTTTTAATCTTGATCATTGAGGTTTTAAAATAAAATTATAGGAATGCTAAGCCTAGCCAATGGGTAGGGTGATTAGGGTGATTAATTTCTAGCTGGCAATGGTGTTAGGGATGGTGGCTTC-------TGTCCAGGCCA-AGCCT---GGGTTGGGGCCCTATGGCTCCCCATTCTAGCACCAT-CCCCATGGATCAGCTACTG-CTTCAAATCCTAACAAAGGGTGCATGACATATGGGATTTTTCTCCTTTTCATTTATAGTCACATAATTCAGAAAACATATATTCCCTTTTCTGTCACAGTTAAAGTATTGGCCAGATATAATAAATCTCTGATTTTTAAAAGCCTTGTAGTAT-----GAGAGACATGCTAACATATGAATTTGAAATCTGGTGATTAGAAA-GTGTTT--------TGAATGGCCTTGAGA-ACTGCAGGTAAAACATTAAATTGTACTAATATTCTTGTTTAGTTAAACTTTTTAATGTTTTAAAAAGCCCTTCATAATATTATGGATAAGTAAATTCTTGGGCCTGATTTCAATTTGAGTCGAATTCCAACTAATAATGTTACACCCATAAACCTTCTCCTTAACAGCCCATAACATTAAACTGAAAACAGAATTCTTAAAGGACACTTTTATGCTGCCTACCCATGAAATAAGCTTTACAGACTTTTGACAGATGTCTTTAATAGACACTGTTATTAAAAAGAATGTTACATAAAATAAATTTAGATTGTTAGTCTAGCACAATTACT----------AAAGGAATACTTCTGCATGTTCAGATAATCACATCTACACTTAATTGGAAGAAAAAAAAAACCTGTGGACATTATAATCTTCGGGTAGCAGTCAT chr4 + 94230402 30721143 30721142 30722242 30721143 30721142 30722242 1100 AAGGAAAACAGATT-GTCTCTGAGGCTGATGCCAAATAACTCATCGCCTGAGTTATCACTCCTCAATCAAAAAGTAGATGAAGAAATTACATAAGTCATTTAGACAGCGATCACCATGGAGTTACGCCGGGCTCTCATGTCAGTGATGAAACAGCCAGCTTCCCTGACAGCGGTGAGTTATTCCTCTTATCGCCGGCAGAGCTGCCAAAGGAATCATCATCAGGACTACAGGCACGGAAAAAGACGAGGCCTCTCCAAACTCAAGTGATGAAAACGCAGTGTG--TTATTACTTTATCTTCATCGTCATAATTTAAGCTT--AAACAA----ATGGCGATATTAAACATAG----------------TTAGA-----CAACATTGCGCTCGCTATAAACTCA--------GACTTCAATTTCTTTTCCAGGCCACAGTCTTCGGGGTTCCGTCCCCATCGCCATCTGCC---GCAACGTGTCTCATAACTGAGCCCATATCTTCTAGCCTTGACAAAACCAGCAGAAAATATTGGGTGTT--CTATTACAAGTTATACTTTGGTCACTTTGGAGGTAGAT-TTTCTTCTTCTCTC-TAGTAATAGTAATGACTTCATACAGGACATTGGTCCATTTTTGTTGCACTTTAACCTCACTAGAAAGAAATCACATGTGATAAGAGAGAGCACAAGTGTTCAGAAACATATCTACCAAGACTGACTGCCTTTAAAATATCCTAAATATAGCA--AGAACGTACTAATTATCTTGTACAG------TTTTAAATTCTTTTAGAAACCTAGCAAGGTCCTATAGAAAGCAAGGTTTGTGGGCCTGACTTCAATTTGAGCAGAATCTCGGTTAATAACACTGCACACATAAACCCCCT-TTTAACAGTCCATAATATTGAACCGAAGACAGGATGGCTAAAGAACTTTGTTATTTTTTCTCCCCAGTAAACCAGCATTACAGACCTTCAGCAGGTGTCTTTAATCGACACTGTTATTAAAAA-AGTATTGCGTGAAATAAATTCAGACCGCTTCTCCAGCATTACTTCTCCTCCCATTAAGAGAATTTCTCCTGCATCTTCAGTTATTCATGCCTAAAC------------AAAAACTCATCCTCAGACATTAAGAACCACTGTCAGCATCCAT ..::.x.:...:..-....::..x:x..:::.x::....:x...::::..--........x:.............:x......:.xx:......x....:........:...............:..x..x....:....x:...............:x...........:.....:.........x.:..:.::::..x.x.......:..---.x::...:.:.:....:..:...:..x.--.:..x....:......xxxx.::.:....:x:::.:..--.....:....x.:..x...x.x..x...x.:.:..--...:..----..:.x:..::...:.x...----------------....:-----:..:x.:xx...x..x..::xx.:.--------.:....-------.x.........-..:..---.....xx.x...:..x..:x:.::::---...x.:.-:.:...::x.x...:xx.:-....x.::.:.:.....:xxx...x:.x....x..:.x..--::x..x:x.x.....x.:xx:.x.:.:x.:.:::.x..-..:.:.:....x..-:...x.x....x..:.:xx...:.:x.x..:xx.xxx....x:xx..x:.x..::x.-----..:...x..xx:.xxxx..:.:xxx..:xx.x:...x.:.....-:.:.:.--------...x..x.:..:.:.-.::x:.::..x.:..--.:.x:........xx......x:..------....x...x:...x.:..:..:xx..x::.x:...:..x.:xx.::..:x.........:...........:x....::.:::......:::.:...x........::..-:.......:......:...:...:...:....:..xx:.....:..x:.x....x:.x:..x....xx...:x...x........:..:::...:..........x.................-.:.:..:.:.:.........:...::.:.xx..:....:x.:.x..----------.:..:.x.x..:......x.....x..x...:::...x..------------.....xxx.:.:x::.......x:.x.:x.x.x:....x:... 14M1D35M2I160M3I28M2I38M2D35M2D6M4D19M16D5M5D25M8D6M7I11M1I5M3I26M3D7M1I19M1I40M2D38M1D14M1D57M5I44M1I6M8I15M1I15M2D25M6D110M1D123M1D46M10I40M12D43M 691/1055 65.5% 1100/94230402 0.0% 112/1055 10.6% 109504490 80710065 +3401 chr4 + 190214555 140226488 140226487 140226635 148 TCCTTAACAGCCCATAACATTAAACTGAAAACAGAATTCTTAAAGGACACTTTTATGCTGCCTACCCATGAAATAAGCTTTACAGACTTTTGACAGATGTCTTTAATAGACACTGTTATTAAAAAGAATGTTACATAAAATAAATTTA chr4 + 94230402 94214119 94214118 94214263 94214119 94214118 94214263 145 TCCGCAGAATTCCATCACACTGACCTCATGGAGGAAT-CGTAACGGAGG--TTTATTGGGTTTATATTTTAAGCCAGTGGTGCAGACTCTAAATTGCTGTCTTGAATAGACATTGTTTTTAATAGCAATATTACATAAATTAACTCCA ...x:.:x.x:....x...:.:.x..x.x::x:....-.x...x...x:--.....xxx.::..:x:x.x..::x..:xx.:......:.x:.:x.x......x........:....x....x.:x...:.........x...x.::. 37M1D11M2D97M 91/145 62.8% 145/94230402 0.0% 3/145 2.1% 46012369 NA +3014 chr4 + 190214555 140228518 140228517 140228576 59 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTATGCAA chr4 + 94230402 60813649 60813648 60813707 60813649 60813648 60813707 59 TGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGTAAACATGCAA .....x.xx......x:x.........:.........x..x.x...:...x::...... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 79414869 NA +3660 chr4 + 190214555 140233455 140233454 140233583 129 GTGGTGGCACACACCTGTAGTCCCAGCTACTTTGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGGGCTGGAGGTTGCAGTGAGCCAAGATCATGCCACAGCACTCCAGTGCCATATGACT----CCAGCA chr4 + 94230402 76033201 76033200 76033321 76033201 76033200 76033321 121 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA-AGCAGATGTGTGCCCTAAGCCTGCTCCCAGCA ......-----...x......:..........x::........x.xx.x...x.:........x:.::...xx:..:..:..------..x..x......-....xx:xx.....x..x.x..----...... 6M5D71M6D12M1D22M4I6M 87/117 74.4% 121/94230402 0.0% 16/117 13.7% 64200254 NA +7295 chr4 + 190214555 140237711 140237710 140237848 138 CCTCCCCTTCCCCTGCTGCCACTGGTTT--------CTATCTCCATTGTTCCCTTAAGCCCAGCAGCCAATGTGCAGCCAGGCCCAGCACACGCTCCGCAGCCAGCAACTTCCTCTGAAGCTGCAACGCATAATTACAACCAGCTG chr4 + 94230402 30725422 30725421 30725564 30725422 30725421 30725564 143 CCTCCCCTTCACTCTGTGCCACTGCTTTTACTCTCTCCACCTCCATTGTACCCATAAA---AGCAGTGGGTCCACAGCCAAGCATTGCACGCTCCCCACAGCCAGCAACTTCCTCTGAAGCTGCAGTGCATAATTACAACCAGCTG ..........x.::xx........x...--------.:.:.........x...x...:---.....:x::.x::......:..x:x....:.x.:..:...........................::................... 28M8I22M3D85M 107/135 79.3% 143/94230402 0.0% 11/135 8.1% 109512289 80702266 +27271 chr4 + 190214555 140273648 140273647 140274252 605 AAAAAAAAAATCCCCTAATTTCACTGTCAAGGTTTTGAGAGGCATTCTCATGGTTTTAAAGAGATTATTGCATAATTTGTTCATGTTTAAAGAATTATATTGTTAAATAAATTTAGCTCTCCAGATTCT-AAATGACAAAAACAAGAGAAGTTACATCATTTGAATTATGAAGTGATAATGTCTTCCAATTCTGCCCCAATCAAAAGTGTAACAGTTTAAAGCTTATAATAATCATGTTCAAACATATTCAGATTATAATTACTTTTCTTCTGATAATGATAGCCCGTCTGATTGGATGATTACCTATTTGACTTTGATAAGTCTCAGAGGTCAAAAAAGGGATAATTGCAGACATCTGTTTTCTATGGAAAATATAATCTCAGAAAATAGTGTTTAAAGTGACATCTGCAAATATGTGTTTTAGAAAGAAACTCGTTGTACATTTAAAATCATAGG-----------GAAAAGAAGCAATTCCTAAGCTACTATG-TATCACCCTGTCTTTGTAAATAGATGAGCGAGTTTAACTTACTAGTATTCATGTATGCATGAGTAATTACAAGCAGGCATGATTATATTTTGTACAGGTAGA-ATTAGAAATAGACATAGAT chr4 + 94230402 30738024 30738023 30738616 30738024 30738023 30738616 593 AAACAGAGTTTTCCTTAATTTCCGCATAAAGGCTTTGAGAATCCCTCTTCTGCCTTTAGAGAGGGTATTACATAATTT-----TATTCAA-----TACACTGTTCTGTAAATTTAGCTCTTCATATTCTGAAATCACAAGGAGAAGTGAAGTTGCATCATGTGAATTATGAAGCGATAATGTCTTT-AGTTCTGTCCCAATCAGAAGTGTAACCGTTTAAGGCTTGGAATAATCATGTTCAAACGTATTCAGATTATAATTACTTTTCTTCTGATAATGATAGCTTGTCTGATTGGATGATTACCTATTTGACTTTGATAAGTCTCGAAGGTCAGAGAA--CATAATTACAGACATCTGTTTTCTAAGAAAAATAAACTCTTGGAAAATAATATTTAAAGTGGCATCTGCAAATAAGTGTTTTAGAAGCGTGCTGCTCGTG---TGAAAGTCACAGGCAGACAAATAAAACAAAAGCCAATTGTCAAAATACCAGGTTAGCACACTTCCTTTGTAAATA-ACGTCCAAGTTT--CCTTCTGACACTTCTATAAGCATAAATAACT-------TGTCTGATGAGAATATGTTTGAGTAGACATTAAGAATAAAAACAAAT ...x.:.:xx.:..:.......xx::.x....:.......:x.x:...:x..x:....:....:x....:........-----.:..:..-----..:.:....xx:.............:..x.....-....x....::.x...x......:......x............:...........:-.:.....:........:.........x......:....:x.................:.......................................::........................................::......:.:..--x......:.................x.:......x.x...::.......:.:.........:............x...........:x:x:..xx.:..:---.x...:...:...-----------:.x..:.:x.....x::..:x...:.x.-..x...x..x:...........-.:.xx.:.....--.:.x..:::.:.:x.:..x....:.:...:.-------x.:x....x.x.x.x...x:::.....-....::....:.x.:.:.. 78M5D7M5D34M1I56M1D152M2D100M3D13M11I28M1I22M1D12M2D31M7D27M1I19M 448/579 77.4% 593/94230402 0.0% 40/579 6.9% 109535624 80678931 +3746 chr4 + 190214555 140290682 140290681 140290755 74 GTGTGCCTGTAGTCTTAGCTACTTGGGAGGCTGAGGCGGGAGAATCACTTGAACCCAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:::.........::........x.xx.x...x.............:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 64257478 NA +4202 chr4 + 190214555 140343503 140343502 140343716 214 GTGGCTAGTGCAAGGATCAGATAGCACCTGCTTGGAAGTTC-ACTGATTAATGATTTAACAAGGGCGGTCACATGGGACAACTGCTGCTTTTCTCTGCCCTCATTTTTCTTACTAACAGGTCTGAAAATTGAACAAGATGGA-------CGGGTCCAGGAAAGAGGAGGAGGAAGACAGCACATTCACCAACATTTCTCTTGCAGATGACATAGGTAAGGAA chr4 + 94230402 30757048 30757047 30757248 30757048 30757047 30757248 201 GTGGCTGCCCACAGGATCGGGTAACACCTGT------GCTCGACTCATTAAGGATTTAACTA---CGTGCAC---GGAAAATGGCTGACAACCGCCGTGCTTAATGTGCTGCCC-------CTGAAAACTTGGAAAGAAGGAAACACAATGGATCTA--CCCGTAGATGAGGAGGACGGCTCTTTCACCAACATTTCTCTGGCAGATGATCCAGGTACGAAA ......:x:xxx......:.:..:......:------.:..-...x.....x........x.---..xx...---...x..:x....x:xx:.x.:.:x..:.x.x.x..xx.:-------.......:.x::x....x...-------:..:..:.--xxx.x:..x.....:...:..x.x.................x........:x:.....x.:.. 31M6D4M1I20M3D7M3D39M7D21M7I8M2D63M 133/193 68.9% 201/94230402 0.0% 29/193 15.0% 109586455 80628100 +4085 chr4 + 190214555 140348505 140348504 140348604 100 TATATGTATGTGTGTGTGTGAGTGTGTGTATATGTATGTATATATATGTGTGTATATATATGTATATATATACGCACACACACACACATCAC-------ATTTTCTT chr4 + 94230402 85834533 85834532 85834633 85834533 85834532 85834633 101 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT------GCACACATACACACATGGCCTGGGGAATTTTCTT ...x::.x.....x......x........:...xx.....x::...::.:....x...:....x...------.......:........x:.-------........ 67M6D19M7I8M 73/94 77.7% 101/94230402 0.0% 13/94 13.8% 54513972 NA +3289 chr4 + 190214555 140348507 140348506 140348598 92 TATGTATGTGTGTGTGTGAGTGTGTGTATATGTATGTATATATATGTGTGTATATATATGTATATATATACGCACACACACACACATCACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTG--------TGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA-CACAT ...x:..x.....x....x.......--------...:...xx....:x.:...:.......x...:..::x:.::......:...-..... 26M8D52M1D5M 62/83 74.7% 83/94230402 0.0% 9/83 10.8% 54513974 NA +3646 chr4 + 190214555 140348508 140348507 140348582 75 ATGTATGTGTGTGTGTGAGTGTGTGTAT--ATGTATGTATATATATGTGTGTATATATATGTATATATATACGCACA chr4 + 94230402 85834538 85834537 85834614 85834538 85834537 85834614 77 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x.:...x........x..........--.....x.:...:......:x:..:..:.x.:.::.:.:....:.... 28M2I47M 56/75 74.7% 77/94230402 0.0% 2/75 2.7% 54513970 NA +3280 chr4 + 190214555 140348515 140348514 140348580 66 TGTGTGTGTGAGTGTGTGTATATGTATGTATATATATGTGTGTATATATATGTATATATATACGCA chr4 + 94230402 86633924 86633923 86633989 86633924 86633923 86633989 66 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTA ..x.:...:.x.:..:x........x......:..::...........:..x.:...::..x:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 53714591 NA +4120 chr4 + 190214555 140361517 140361516 140361601 85 GAGGCATGGTTCTGTGCCTGTAGTCCCAGCTATTTGAGAGGCTGAGGCAAGAGAATCACTTGAGCCCAGGAAGTTGAGGCTGCAG chr4 + 94230402 76033193 76033192 76033277 76033193 76033192 76033277 85 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:..::..xx..::.x......:.......:....:........x.xx.x...x.......:.....:.:x..x:.....:.. 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% 64328324 NA +3322 chr4 + 190214555 140369818 140369817 140369894 77 TCTATTTGTACTTATAGCCTTTCCTTATTCAGAAGGGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 52653392 52653391 52653468 52653392 52653391 52653468 77 TCTGTTTTAATTTACAGCCTTCCTTTGTCAAGGATGAACATATTTGTTTTCTGCTTTTTGTTGTTGTTTTTTTTTTT ...:...xx.:...:......:.:..:.:x..:.x.::x..x...x....:.x:.....x..x..x........... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 87716426 NA +3503 chr4 + 190214555 140375345 140375344 140375449 105 CACTCATTCTCACAACAAACCCATGAGATACGTACGGTTATTATCCACATTTTACAAATGAGGAAACTTAAGGCCGAGGTGTTAACCTTGCCCAGGGTTCCAGAG chr4 + 94230402 35005027 35005026 35005128 35005027 35005026 35005128 102 CATTAATCTTCATAATGGCCC--TGAGAGATGAGCAGTTATCATCTCCATTTTACAAATGAGAAATCAGAAGGACAGAATGCTGTCCTT-CCCAGGGACACTGAG ..:.x..::...:..:::x..--.....x.:.x:.:.....:...:x...............:..x.xx....x.::::..:.:x....-.......x:x.x... 21M2D66M1D15M 69/102 67.6% 102/94230402 0.0% 3/102 2.9% 105370318 84844237 +6941 chr4 + 190214555 140379561 140379560 140379658 98 TATTACAGCAGTTGATGCTGAAAATCAAGTGGAACTGGAGGAAAAAACAAGACTTATTAATCAAGTGTTGGAACTCCAACACACACTTGAAGGTTGGC chr4 + 94230402 30763341 30763340 30763438 30763341 30763340 30763438 98 TATTGCAGCTGTTGAGGCTGAGAATCAGGTGGAATTAGAAGAGAAAACACGGCTTATTAATCAAGTTTTGGAACTGCAGCACACACTTGAAGGTTAGC ....:....x.....x.....:.....:......:.:..:..:......x.:..............x........x..:................:.. 98M 83/98 84.7% 98/94230402 0.0% 0/98 0.0% 109616220 80598335 +15951 chr4 + 190214555 140380944 140380943 140381370 427 TTTTTATTTTTTATA------------TAGATCTCTCTGCAAGAGTAGATGCAGTTAAGGAAGAAAATCTGAAGCTAAAATCAGAAAACCAAGTTCTTGGACAATATATAGAAAATCTCATGTCAGCTTCTAGTGTTTTTCAAACAACTGACACAAAAAGCAAAAGAAAGTAAGGGATTGACACCCTTCTGTTTTATGGAATTGCTGCTGATCATTTTTTCTTTAAAACTTGGATAGATTCCAAAAGTTACAG-TACC----TTTGTGGCTTCATTGAATATTTATGAAGAT----AATGTCAGATGTAGACAAAAATAACA-------CAATAACAGGAGACTTCCATAAGTTTGTGTATTATG-TTAGTCTATGAAAACGTGCAAATGTATTGTAGAGACTTTATGATTAGAATTGCATATATTTATGAAACTTAAAGATGA--ATGTTTTATTGA chr4 + 94230402 30763960 30763959 30764392 30763960 30763959 30764392 433 TTTTTCCTTCTTATAATGTCACCTTCACAGATCTCTCGGCACGAGTAGATGCTGTTAAGGAAGAAAACTTGAAACTGAAATCAGAAAACCAAGTTCTTGGACAGTATATAGAAAATCTGATGTCAGCATCTAGCGTTTTCCAAACCACTGACACAAAAAGCAAAAGGAAGTAGGGGTTGGCTCCCAAGCCATGTCATTGTATTGCTGCTG-TCTTCTTTGTTTTAAG--TGGCATAGGCTACATAAGCTAAAATTATCTTAGTTTGTGGCTTTCCTGGATACC--TGAAGATTATAAACTTCAGCGATAAGCAGAATTAAGAACATTATCATGAACAGGAGA----TGCAAGTTTGTATATTAAGATTAAGCGAT------GTGCAAATATAGCGTAGAGACTT----ACTAGACTTTCGTATTTGTA------TTAAAAATGAGCATATCTTGTTAA .....x:..:.....------------:.........x...x..........x..............::....:..:..........................:..............x........x.....:.....:.....x....................:.....:...x.x.x:x..xxx.::.x.:..x.x..........-..x.:...x:.....:--.x.x....::.x..x...:..x.:-..:.----..........:x:..:...::--.......----..:x....xx:..::..:..x...x.-------..xx.........----:::........:.....x.-...:x.x..------........:..x:..........----.:....x..x.:...x.x..------.....:....--..:.:..:..:. 15M12I183M1D16M2D24M1I4M4I21M2D7M4I26M7I13M4D19M1I9M6D23M4D20M6D10M2I12M 314/402 78.1% 433/94230402 0.0% 56/402 13.9% 109616984 80597571 +8636 chr4 + 190214555 140388463 140388462 140389317 855 AAAAATATTTAAATTTTATTTTCAATA-GCAATGTATGCATAAGAA--ATTTTGTGAATGGGGT--AAACCACTCTGGCATAAAGCA-----ACTATAAAAACTTGAAAAAAAATCTGTACATCATTTT----GTTTTGATAAAACCCATTATCCTTGTATTCAAATGTAAAATATGCTGCAATA-TAATCCAGTGATTTTATGAACAAGGCATGTCCTTAAAGGAATCTATAATTTAAGCAAACAACTCACTGTAACTATAATTTGACACAAACTAGGTAA-----------------------ATGTGGGTCATATACAACACTTTCAATTGTTGATAGAATCAAACAACCATACAGAAACT-TTATTGCATTTAGCTCTTCACA-ACAGAACATATGCTCATTTTTA----------TTATAGAACTACCAGTTATATTGTTGTATAGCCATTTAAGTGGAAA--TTCCAATAACTGATTTTTCCAATAGCAATGAAGCTGCTACA-TATTATTT--TGTTCT-------GTACAAACCAAAACT----ATCTCCAAACAACTAAAACTGTGTAACTTCTAATGGTATTAATCTCTTAG--ATCCGATATGTAAT-------------------GTGCCACTTTTATTCTAAAT-TCAAAGATGAGGTAACT--TCAAAGTTGCTTCTTTTTCCTCTGAAATGAAGGACTAAAATAAATGTCTGAAAGAATAT----AATGTTGCTAGATATTAG-------AAACAGGATGTGCAGA----------------CTGATTAAAGTTCAGGT-CTGGCATGCTG-----ATTTTTACAATGCCAAACATCCCTCTCGGGAATTAAAAATATTTCAATCTAGT-------------------TTAGTCCTTTCGTACTCTTCTTTTGCGTACTGACTTTATCGGCCCATCTCCAGATCCTGTGCTCTCATCTGCTTCTTTCATCTAGAAAAAATAA chr4 + 94230402 30768019 30768018 30768951 30768019 30768018 30768951 933 AAGaattattaaatatt--ttttaataCACAATATACACTCAGCAAGTATTCTATAAACAAAATCTATGCCGTTCTGGCTTGGAACATGAGAGCTATAAAAGTCTGAAAAAGCCTCTCTC--TCACTTCTGTAGATTTGATA------------CCTGCATTCAAAAGCAAAATAAGTCACATCAATTAACCACTTGTTCTCTGAGTA--TCCTATTTTCAA------CTATCTCTTAA--AAATAAATTACTATAACCAATGTTTAAAGTGAAC-AGGTGACCACTGTGTAACAATAGCAACTAAAATAAATAATTTACAAGAAG---AATTGTTGCTAGCACTAAATGATCATACAAAAACAATTATTGCATTTAGCTCTGCACAGAAAAAAAATACCTTCTCTCTCAACAACGTGAACTGTATATGCTTCATCTATACTGC-----AACTCCCTTAGTTCAAACGTGTAAACAGCTAATGTT-------GTGCTAGAGCTGCAAAAATATTTATTCATGTTCTTAAAAATATGTAGAGTAAAATTTCTCATCTCTAA----CTAATATTG----ATTTCTAAGAGTCTTCAAATCTTAAGAATCTGCTTTTTAAAATCACTTGGCCAACTTGCAGTTTCACCTTTATTCTAAATGTGAAACATTACGTAACTCCTCACAGATAGTATTTCTTCTTAAAAAAAAAA------AAAAAAGGGCATCAAGGAAGCTTGGGAAGGTTAAAAGAGGTTAAGGAATTAAGAGAGGTTAAGTAGCGACGAGTCCCATTTTTCCCTTCACATCTCAGGAACCTGCGTGCTGTCAGGCCCTTTGCAGTGGCA--------TGTCATAAGTTACTACTGTTTGCAGCTAGTATTTCTAGCTCTAAACAACTCAGTCCTTTTGTACTCTTCTTTTGCGTACTGACTTCAGTGGACCATCCCCAGAGCCTGCAATTTCATCAGCTGCTGTCATCTGAAGGAAAAAA ..:...xx......x..--...:....-:....:..::.x:.:x..--...:.:.:..:::::.--.x:..::......x.::.:..-----:........:::.......:xx...x.x--...:..:----.x.......------------.:..:.......x.:......x.:::..x:.-.x.x...x.x:..:.x...::.--x.x.:.::.:..------....xx:....--...:..x.:...:....:.xx:...:.x:::...-....:.-----------------------.x:.:::.x..x.....x.xx---........x...x.::...::.:......:....x-.................x....-.x.:..x...:x:..x:.:.:.----------:.:..x.xx:x:..x:....:..:-----.:.:x::.x...xx...--.x:x..:.:..:..x..-------.::x.::......x.x.-....xx..--......-------:.::.:.x:....:.----.....:..----....x.:..----.:......x:..x..x.xx.....:--...:.x.x.x...x-------------------..x:...:............-.x...x..x.x......--...x..x.:x.x:..:...:.xx:...x:..------...x..:x.:x.x..:...xx.----..x...:xx...x:...:-------.:.x...x.:x.:..x----------------.:xx.:.x.x:.....x-.:x..:.....-----x::...:..:..x..--------.x..:x:.:...xx.x.:...xx.x.....-------------------.:........:.........................:.x:..x.....:.....x....::x.:.....x...x..x......::.::...x.. 17M2D8M1I18M2I16M2I21M5I28M2D7M4I9M12D31M1I22M2D12M6D11M2D34M1D6M23I21M3D35M1I22M1I22M10I24M5D17M2I17M7D17M1I8M2I6M7I15M4I8M4D9M4D25M2I14M19I20M1I17M2I31M6D22M4I18M7I16M16I17M1I11M5I15M8D30M19I94M 527/791 66.6% 933/94230402 0.0% 206/791 26.0% 109620444 80594111 +13719 chr4 + 190214555 140393822 140393821 140394070 249 ATACCTTATTAGCATTTGCTATCATTATTTTCCATCTCCAACCATCTGCAGCCCAGTGATCTGCTACTTCCTTTTCCGAACAGATAATAAAATTATCAAAGTAGATATCAGAGGTCATAGACCAAAGCTCTAAACCAAGAGCACTGAAAGAAGTCAGAAG---AAATGGATGATCATCTTCGAAATAATCTGGATTAGGAATTTTTCGAGGACTCCAGATTCCCT--------GGAAGAAAAGTAATTGAAGACATTTTC chr4 + 94230402 30775014 30775013 30775273 30775014 30775013 30775273 260 ATACCTCGTTAGCACTTGCTACTAGTTTCTTTAAGCCCCAACCATCTGCTGCCCAACGATCAGCTACTTCTTTTTCTGAACATATTATGAAGTTATCGAAGTAGATATCAGATGTCATAGACCAGAGCTCTAAGCCAATAGCACTGATAGGTGTCATCATCTCAAACGGGTGAGGATCTTCAAAGTAGTCTGGGTTCGGTATTTTCCGAGGACTCCAGATTCCCTTTTATGGGGAAAGAAAAACATGTAATAACATTATC ......::......:......::.x.x.:..:x.x.:............x.....::....x........:.....:.....x..x..:..:.....:..............x...........:........:....x........x..:x....xx.x---...:..:...xx......:..:..:.....:..x..x.....:...................--------.:.......::.xx.:.x:.....x.. 160M3I62M8I27M 196/249 78.7% 260/94230402 0.0% 11/249 4.4% 109618808 80595747 +6723 chr4 + 190214555 140395792 140395791 140395995 204 TAAATAAT--TGGAACAAGCGGTTGTTACCTGATAGTTAGGATTATCGACCAGTGGAGGTCTCCATACTCCTTTGTATTTTGGGTTATCTATCATGGGAGGTTTCCACTCACCACACCCA-ATCCG-----ACATGCTGGATTAAGAATCTGAGGTGCCTCCCATTCTCCATCCGTGTCTTCATTCCTTAGGATATTAAAACAAAGCAAATA chr4 + 94230402 30775591 30775590 30775799 30775591 30775590 30775799 209 TAAATAATAATGTACAATACTGCTAGTACCTGATAATTAGGATTAGGTATCATAGGTGCTTTCCATTTTCCTTTATACTTGGGGTTGTTCTTCATGGGACGCACCCACAGTCCACAACCAGGTGCGGTGGCACACTTCGGATTGGGGACCTGAGGGGCTTCCCACTCCCCATCCATTTCTTCATCCCTACAGAAAGAAAGGCA---CAAATA ........--..x.xx.x:.x.:.:x.........:.........xxx.:..xx..x.x.:.....x:......:..:..x.....:.::x........x.:x:....xxx.....x...-:.x..-----...:x::.....::.:.:......x..:.....:..:......:.x.......:...xx:..x.xx..::..---...... 8M2I110M1I5M5I72M3D6M 140/201 69.7% 209/94230402 0.0% 11/201 5.5% 109620201 80594354 +7033 chr4 + 190214555 140396083 140396082 140396216 134 AGTGCTTACCAGTCATCAGGTTTTTCAGCATTAGGATCAGGGATAAATTTTGGTTCATCATCAAGCCAGCCAGCAGGTTTAACAACACTTGAATCTTCTATTTGGGCAGGTTCACTTTCATCCCTGTAAATACA chr4 + 94230402 30776336 30776335 30776469 30776336 30776335 30776469 134 AGTTCTTACCAGTCCTTTGGCTTTTTTGCACTGGGGTCCGGAACATACTGTGGTTCATAATCAAGCCATCCTTCAGGTTTAACAGCATCAAGATCTTCTATTTTGGAAGGCTCATCTTCATCCCTTCAATTACA ...x..........x.:x..:....:x...:.:..:..x..:.:.x.:.x........x.........x..xx...........:..::x::...........x..x...:...::.........x:..x.... 134M 100/134 74.6% 134/94230402 0.0% 0/134 0.0% 109619747 80594808 +11749 chr4 + 190214555 140398842 140398841 140399064 223 TTTGCTTACCAGTCTTCTGGTTTGACGGCAGAAGGATCAGGAATTTTTGCTCTTTCATCCCATTCCTCAGGTTTTTTATCATTGGGATCTTCAATTTCTTTGGGAGGTTTGATAGGAGGAACCACATCCTCTAGGAGGCTTCCTTTGTTTACAACTGTTTGATCAACTAACACCTCAAATGTGTCATCTGGATTCATCACTAAGGGACCAATTTAAATAAATT chr4 + 94230402 30777150 30777149 30777364 30777150 30777149 30777364 215 TCTCCTTACCAGTCATCTGGTTTGACAGCGTTGGGATCAGGTATTTTTGGTCTCTCATCCCAGTCGTCAGGTTTCTTATCAGTAGGATCATCTATTTCTTTAGGAGGGTTTACTGGAGGAACCATATCCTCAAGAAGACTTCCCTTACTGATGACTGATTGGTCGATCAGCATTTCAAACGTATCATCTGGTTTTAGCACTAAA--------TTGAAGAAATT .:.x..........x...........:..:xx:........x.......x...:........x..x........:......x.:.....x..x........:.....x..x.:x..........:......x..:..:.....:..::.x.::....x...:..:.::.:..::.....:..:........x..:.x......:--------..:..x..... 204M8D11M 166/215 77.2% 215/94230402 0.0% 8/215 3.7% 109621692 80592863 +12918 chr4 + 190214555 140400296 140400295 140400568 273 CATGAATACATCAATAGTCAGCAAATATTTTTGAAT----------ACATGAATGAATTAAAAGGGTATACCAAGGGTATAAAGATGAGTCTTCCTGTCTGTAAAGAACTTTTTAAGGTCTACATCTGGAGGTTTGGCATGTTTCTCTTCGAAAACTCCAGTTTTGGGATGTTTATGTCTGAAGATAAAATGAAGTTTATAATCTTCTCCACATTTATCTGGTCCAAACATAATGATATAGGATGTTTTATCATAAAAGTTTTCCTTCAAAGAGAGATGAGTG chr4 + 94230402 30778843 30778842 30779121 30778843 30778842 30779121 279 CATGAA-GCTTCAGTAGAGAGAAACTAATTTTGGATTCTAATTTAAACTTGTAAGAACTAAACA---ATACCAAGAGTGTATAGATGTGTCTTCTTGTCCAAATAGAACTTTTTCAGGTCCACATCAGGACGTTTTGCATGTTTTTCATCGTATTCTCCAGTTTTAGGATTCCTGTGTCTGATGATGAAGTGTAGTTTGTAATCTTCACCACATTTATCTGGTCCAAACATAATAGTATAAGGCGTTTTGTCAAAAAAGAACTCCTGTAAAAGTAAAGAAGTG ......-:.x...:...xx..x..x..x.....:..----------..x..x.x...:....x:---........:..:..x.....x......:....::x.x..........x.....:.....x...x....x........:..x...x.xx..........:....x::.:.......x...:..:..x.....:........x..........................::....:.::.....:...x.....xx:....x:...::x.:.x:.... 6M1D29M10I18M3D216M 206/269 76.6% 279/94230402 0.0% 14/269 5.2% 109621453 80593102 +6006 chr4 + 190214555 140401911 140401910 140402086 176 TCAGTTTTATCATTTGTTCCTTAAAAATACTTATTAACTTTAATAAGGTTTTCTTAAATAT------TAAAATATCATACCAGAATCAAATCATCAGTGTCTGCTAGGAGTTTAATGTATGCACCTCCACAATCAATACCATCTTGAAAATTTACTTCATATCTGAATAAAGGGAAAAAGAA chr4 + 94230402 30779782 30779781 30779956 30779782 30779781 30779956 175 TCTGTATTCTTATTTATT--TTAAATATGCTCATTC-CTCAAATAAA----TCATCAATAGCAAATGTAAAGGGGCATACCAGATCCAAGTCATCCGTACTGGAGAGAAGTTTAATATATGCACCACCACAGTCAATGCCTCCTTGAAAATTCACTTCGTACCTAGGCACAGAGCAAATAAA ..x..x..x.:....:..--.....x..:..:...x-..:x.....:----..x.x....x------....:x:x.........x:...:.....x..:::x.xx..:........:........x.....:.....:..x:..........:.....:..:..::::.x..:.x...x:.. 18M2D16M1D10M4D10M6I115M 121/169 71.6% 175/94230402 0.0% 13/169 7.7% 109622129 80592426 +10144 chr4 + 190214555 140405934 140405933 140406103 170 ACACTTACTGAACTATCAAGGGTTTATCAGCAAAAATGAATGGTTTTGCTAATACAGCAGATATTGCATGATGCTTTGCTCTAGATTTTAATACCAGTCCTCTGTCACCAGGTACCTGGTTTTCTTTCAACTCTTCAATTTCCCATCTTCCTAAAAAATAAAGCAAAGCA chr4 + 94230402 30780695 30780694 30780864 30780695 30780694 30780864 170 ATACTTACTGAACAATCAAAGGTTTTTTATCAAAAATAAATGCCTTTGTTAGCATAGCTGATATTGCATGATGCTTTGCAGCCGATTTTAACACTAATCCTTTGTCTCCAGGTACTGTGTTTTCTTTCAGCTCTTCTACTTCCCATCTTCCTAAAAGAAAGAAACAAACA .:...........x.....:.....x.:.x.......:....x:....:..::.:...x....................xx:x........:..:.:....:....x........:xx...........:......x.:.................:.x.:.:xx..:.. 170M 134/170 78.8% 170/94230402 0.0% 0/170 0.0% 109625239 80589316 +3365 chr4 + 190214555 140408843 140408842 140408922 80 TTTTTGGAGTTGATAAGCATATATATATATATATATATATATACACACACACACAT-ATATATACACACATATATGTGTAT chr4 + 94230402 83316550 83316549 83316630 83316550 83316549 83316630 81 TCTTGGGAGTGGATGAGGGTATGTGTGTGTATATGTTTATGTACACATACATACATAAGGAATCTGGACAGATATGTGTAT .:..x.....x...:..x:...:.:.:.:.....:.x...:......:...:....-.x:x..x::x...x.......... 56M1I24M 57/80 71.2% 81/94230402 0.0% 1/80 1.2% 57092293 NA +3212 chr4 + 190214555 140408881 140408880 140408933 53 ATATACACACACACACATATATATACACACATATATGTGTATATGTATATATA chr4 + 94230402 74526074 74526073 74526126 74526074 74526073 74526126 53 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..x:..............:x.:.......x......::......:.:...x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 65882807 NA +6293 chr4 + 190214555 140456506 140456505 140456743 238 TTTGGTAAACAAATTTTAGGTAATTACGTTGGATAGATAATATTTTTCCTAAAATATTTGGTATTCATAAA-----GTAAATACTCACAAGATCTTCTCCTGCGTCACACACCTTTACCTGAAAAATGTCATTCAAGAGCCAGTCTATGGGTTTCTCTTTGTAGAACATTAAAAAAAACCGTACAAAGTGAGTTAAGTCCTCAGATCTAAACAGCTTTCCTATGGAAAAAAATACAA-TTAGAT chr4 + 94230402 30796107 30796106 30796330 30796107 30796106 30796330 224 TTTTGAAAACAAATTGTG-----TTGTGATGGAGATTGAGTATTACTT------------ATATTCATAAATGCATAGACATACTTACCGCATTCTTTTCTGGATTGCACACTTTGACCCAGAACAGGTGGTCAAGAAGCCAGTCTATGGGCTTATCTTTATAGAACATCACAAAAAATTCTACTATAAGTGGCAAGTCTTCTGTTTTAAACAATTTTCCT---GAAAGCAAGACAAGTTGGAT ...x.x.........x.:-----..::.x....x.xxx.:....x:.:------------:..........-----:x.x.....:..x:x..::.:.:...x:.::.....:..x...:::..x.x..x:.:x.::..............:..x.....:........:.x......::x...x.x:x.x.x:.....:..x.x.:......::......---....:x..x....-..:... 18M5D25M12D11M5I145M3D13M1I6M 149/218 68.3% 224/94230402 0.0% 26/218 11.9% 109660399 80554156 +3100 chr4 + 190214555 140460795 140460794 140460836 42 TCAAAAACAAAACAAAACAAACAAAAAAACAAAAACAAAACT chr4 + 94230402 29019747 29019746 29019788 29019747 29019746 29019788 42 TCAAAAATAAAACAAACCAAACAGACAAACAAAAATAAAACT .......:........x......:.x.........:...... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 111441048 78773507 +4788 chr4 + 190214555 140461927 140461926 140462059 133 ACCTGTAAATAATACTTGGCCTTGGGTTGGGCATACAGCAACAAAATGCAAAAATCCAATACCTGTTTGATTCGCCAACTAAAGGTAATCAATAAGATCTGTTAAT-ATTT---GTCATTATTAATTTTTATTTATA chr4 + 94230402 30800723 30800722 30800859 30800723 30800722 30800859 137 ACCTGTAAATAAAACGTTCCCTTAGGTTGAGCATACAGCATTAAAAAGCTATAATCCAAATTCTGTTTCGTTCTCCACCTAAACATAAGCAGCACATTCTGAAAATCATCTTGGGTAATTTCCAAAGGTTATTTGTA ............x..x.xx....:.....:..........x:....x..x.x.......xx:......x:...x...x.....x:...x..::.x:x....xx...-..:.---..x...x::..xxx......:.. 106M1I4M3I23M 96/133 72.2% 137/94230402 0.0% 4/133 3.0% 109661204 80553351 +3108 chr4 + 190214555 140471171 140471170 140471244 74 TGTGAGTCACCATGCCTGGCCCTCCTTTTCCTTTCGTTTCTCCTTTCTCCTTTTTGTTTCCTTCCTTCCTTCCT chr4 + 94230402 88457287 88457286 88457360 88457287 88457286 88457360 74 TGTGAAACCACATGCCTTGCAATTCCTATCCTCTCCCTGCTCTTCCCTCCTTTTTGTTTCACTCCCTCTGTGCT .....:x.xx.......x..xx.:.:.x....:..x:.x...:.::..............x:...:..:x.x.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 52013884 NA +3140 chr4 + 190214555 140485785 140485784 140485851 67 TGAGCAACAGAGCAAGACCCTGTCTTAAAAAAAAAAAAAAAAAAAAAA-AAAAAAAAAAAAAAAAGCA chr4 + 94230402 18047927 18047926 18047994 18047927 18047926 18047994 68 TGATGAACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCA ...xx......:...xx.::.x................x........x-:..:.x:.x.......... 48M1I19M 52/67 77.6% 68/94230402 0.0% 1/67 1.5% 122437858 67776697 +3179 chr4 + 190214555 140535132 140535131 140535238 107 TTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCTTGGGGTATATCTAAACTAAGGACTCTATTTTTATTTTTCTTACCATTTTTGATTTGA chr4 + 94230402 12085028 12085027 12085131 12085028 12085027 12085131 104 TTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACTGGTGTACTTTGAATCCCTGAACTCTATCATTGTTCCTTATAAC---TGTGATGTGA ..::x..x.:..x..::.........:....:......:.:.:::.x.x:...x...:x.:x..x.:xx.:.......:x..:..::.:x..x.---.x....x... 94M3D10M 66/104 63.5% 104/94230402 0.0% 3/104 2.9% 128450104 61764451 +6860 chr4 + 190214555 140537356 140537355 140537546 191 AAGACTTTATTGTGATAAGAGGGTATGCTTTTTAAAAATAATTTTATCATTTTT---------AGTTTTAAAATATGCATGAAGATGTGCTTACTGCAGATAACTGGTTATAAACAGCTGTATTTGGATGTAGAAAGTGTGAGGAAAAGGCCATATGATTCTGATAACCTACAGCATGAAGAGCTACTCATGAAGGTAAA chr4 + 94230402 30828912 30828911 30829103 30828912 30828911 30829103 192 AAGAATTTATGGTCA------ACTATGCCTCTTAATAGC--TTCTGTTATTTGTTGTTATTCCAGGTTTAAGACAAATCTGCATATGTCCTTACTGCAGATAACAGGTTATAAAAAACTTTACTTGGATGTGGAAAATCTGAGGAAAGTCACATATGATTCAGATAACGAAGAACACGAGGAACAGTTAATTGAGGTAAA ....x.....x..x.------:x.....:.:....x.::--..:.:.:....x.---------..x.....:.:.x::x..x.x....x...............x.........x.:..x..:........:....:.x........:xxx..........x......xx.x.:..:..:..:.x::.x..x:....... 15M6D18M2D13M9I137M 133/183 72.7% 192/94230402 0.0% 17/183 9.3% 109708444 80506111 +9076 chr4 + 190214555 140540148 140540147 140540311 164 ATGGAAATATATTTGTACAGCTTTGGAATCTTCTAATGCC-CACGAAGAAGTTAAACGCTAGAATCTCCAAGCAGTGGGCTGAAATTGGTTTTCAGGGTGATGATCCCAAGACAGACTTCAGAGGCATGGGCATACTTGGGTTAATCAATCTTGTGTAAGTGAAA chr4 + 94230402 30829960 30829959 30830123 30829960 30829959 30830123 164 ACGGTAACATGTTTGTGCAGCTCTGGAATTTGCTGATGCCTCACGAA-AATCTGAAGGCCAGAATCACGAAGCAGTGGTGTGACATTGGCTTCCAAGGCGATGACCCCAAAACAGACTTCAGAGGGATGGGCCTGCTGGGATTAGTGAATCTGGTGTAAGTAAAA .:..x..:..:.....:.....:......:.x..:.....-......-..x:.:..x..:......x.x.........xx...x.....:..:..:..:.....:.....:..............x......x.:..x..:...:.x.....x........:... 40M1I6M1D117M 129/163 79.1% 164/94230402 0.0% 2/163 1.2% 109710188 80504367 +5323 chr4 + 190214555 140542572 140542571 140542647 76 AGGTATTTCAGTGAAAATTACACTAGTGAAGCTCATCAGATTCTTTCCCGTTCAAATCATCCAAAATTAGGGTAAG chr4 + 94230402 30830684 30830683 30830759 30830684 30830683 30830759 76 AGGTATTTTAGTAAGCATTACACCAACGAAGCTCGTCAGATCCTTTCTCATTCAAATCACCCAAAACTGGGGTAAG ........:...:.:x.......:.::.......:......:.....:.:.........:......:.:....... 76M 62/76 81.6% 76/94230402 0.0% 0/76 0.0% 109711888 80502667 +9279 chr4 + 190214555 140543441 140543440 140543594 154 TTTCTGACATAGGTATTCTTATGCAATAGTTGGAATCAATCTTACAGAGATGGCTTATAGCTTACTGAAGAGTGAAGCTTTGAAGTTTCATCTCTATAACCTTGTTCCTGGTATACCAACAATGGAACACTTTCATCAGTTTTACTGTGAGTAT chr4 + 94230402 30831884 30831883 30832037 30831884 30831883 30832037 154 TTGCTGTTGCAGATACTCTTATGCAATAGTTGGAATTAATCTGACTGAAATGGCGTACAGCTTACTTAAGAATGGTGCTTTAAAGTCTCACCTGTACAACATGGTCCCTGGATTGCCACAAATGGAACACTTCCATCAGTTTTACTGTAAGTAT ..x...x:::..:..:....................:.....x..x..:.....x..:........x....:..:x.....:....:...:..x..:...x.x..:.....xx.:...xx............:...............:..... 154M 122/154 79.2% 154/94230402 0.0% 0/154 0.0% 109711557 80502998 +3021 chr4 + 190214555 140549673 140549672 140549738 66 TACTACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATAGGTTCTCAACCAAGCTGGAAT chr4 + 94230402 52752929 52752928 52752992 52752929 52752928 52752992 64 TACCACAGCCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAATACAGAATATTAGTCGAG--GGAAT ...:...x.:......:::....:...............:.x.:..:x.x.:.::.:..--..... 59M2D5M 47/64 73.4% 64/94230402 0.0% 2/64 3.1% 87796744 NA +11490 chr4 + 190214555 140550214 140550213 140550567 354 TTTTCTTTAACTGCAGGTTATCTTGTCTATGAATTTGACAAGTTTTGGTTTGAAGAAGAACCAGAAAGCATTATGTATTTCAATTTGTATAGAGAGAAGTTTCATGAAAAGATTAAAGGACTTTTACTGGATTGTAATGTAGCACTTACTTTA-AAAGTATAAATCATCCACTGTATCTTCTAT---TTCTACCACATTTTGCA-------------CATTCAACAGAATTTATATGTTGTAATAGGAATTATCTGATCAATTACACTCTTATATATAATTTCCTACAAAAATATTTCAGA--AATTCTATTTAAGAAAGCTAGTGGACAATCAGTGTATGTTTACAATTGTTTATACACTGTTCTCCAAAGG chr4 + 94230402 30832434 30832433 30832789 30832434 30832433 30832789 356 TTTTCTTCA----CAGGTTATCTGGTTTATGAGTTTGATAAGTTTTGGTTTGAAGAAGAACCGGAAAGTATTATGCACTTCAACCAGTACAGAGAAAAATTCCATGACAAGATTAAGGGCCTTCTACTGGATTATGATGTGATATTAACCTTGCAGAATACAAAGAA---ACCGTAACTCCTCTGCAGCACATCAGGTTCTGCGTCAAGAAGGGAATTATGCATTTGGTTTTGCAAGTTTCACTATGAACTGTATAA-CAATAGAACTCTTTTGCATAG------AAAAGAAAAAAGCAAGCTAAATTGGGTTAAGAAAGCT--CGGACAATCAACCTCTGTTTACAGCT-CTTATATGCTATTCTCCAAAGG .......:.----..........x..:.....:.....:.......................:.....:......:.:.....::x...:.....:..:..:.....x........:..x...:.........:.:....:::.:.x..:..:-.:.:..:...xx.---..:...x..:..x.---x:x:.:..x:..:...:-------------:..x..x:x.:x...::.x...x:.x..x...:.:.x.:.-....x:x......x.::...:------.x..:..x.xxx..::--..x.:x:x...........--:.........::x.x........::.-:.....::..:........... 9M4D140M1I13M3D14M3I17M13I40M1D21M6D16M2I19M2D26M1D22M 241/337 71.5% 356/94230402 0.0% 36/337 10.7% 109717780 80496775 +3206 chr4 + 190214555 140578579 140578578 140578642 64 AAAAGTAATACAGTGAGGTTTTTCCCTCCCTATTTTCCCCCTTTCCCTTTGTCTCATTCACGCA chr4 + 94230402 7894746 7894745 7894809 7894746 7894745 7894809 64 AAAAGAAATACAGTGAAATTTTTCCTTTCCTTTTTTTCCCCCGCTCTCTCATGTCATCCTTGCA .....x..........::.......:.:...x....:....:x::.::.::.x....:.x:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 132683833 57530722 +3375 chr4 + 190214555 140580543 140580542 140580621 79 GTGGCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGTGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--......:...........::........x.xx.x...x::........::.:x.x:xx:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 64547342 NA +3131 chr4 + 190214555 140586603 140586602 140586660 58 AAGAAAAATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATATA chr4 + 94230402 6857605 6857604 6857662 6857605 6857604 6857662 58 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ......x.....::..:..::..:.:x:.........x...........x..x.x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 133728998 56485557 +3298 chr4 + 190214555 140586613 140586612 140586675 63 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATATATATCTATACATATAT chr4 + 94230402 85834533 85834532 85834595 85834533 85834532 85834595 63 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT ...x:..x.....x.................:.xx:....x.....:....x..x.:.:..:. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 54752080 NA +3129 chr4 + 190214555 140611500 140611499 140611609 110 CAAAAAAAAAAAAAAAAAAACACCACACACACACACACACACACACACACACACACAC-ACACACACACACACAA---------AACACAAAAAACGCGTATGTGTATGTAGACACATAT chr4 + 94230402 26446827 26446826 26446943 26446827 26446826 26446943 117 CACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACACCCCCCAAAACCCTCCACAGACCTAACCAACAATCCAACAACAAAATAAAC---CATGAATATGAAGAGGCAAAT ..x.........xx.......x.x...x..................x.x.xx.x..x.-x....x..x:.xx...---------....x..x....---:...x:....x...x:..x.. 58M1I16M9I12M3D21M 80/107 74.8% 117/94230402 0.0% 13/107 12.1% 114164673 76049882 +4078 chr4 + 190214555 140614791 140614790 140614864 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAATCCTGGAGATGGAGGCTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx.x...x........:..x.:..x.xx:........ 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 64581587 NA +47974 chr4 + 190214555 140620766 140620765 140623004 2239 AAGATAAAAAGCTGTATCTGAGTATTTGCTGTATTTTATTTGTTCACATTTAGCCTATTTGAGGTT-AACACTACTTCATTTGACAGTTTAAAAATCATCCTGTAAATAGAATAAAAAACAACAGCAGCAATAGCTAAAAA------------AAGGACACAATGTATAATAAAATAAAGGAAT-------GTGTTGAAAGAAATATT-CCAAAGAAGCAAAGGAA--------ATGAGACCATGATTATGAATTCAACAATCA-GAAGAAAAAATCGTCCAACATCTGTAAAAAGCAAAATCATAACAGTAATAAAAAAGAAGCAAGAATTCAAAGTGCAGGTGCGCTAGCTTTCATTTCCACATCCATTCAGGAA----ATAGAGCATACTATTC-TTTTATATAAAGTGACAAGTTCTGTTTTTA---------AAACATTCAGTTACATTATCTTGCAGATTTTTTTTCAGTTTACATTATCTCTACATTGATTTGATGGAAAGATGGTCATATGCGATATGTGGTATAAATTTCTTCAATCTATGGAGAATACGGAAA-----TGGTAAAGTTGACTGTTTTACTTATGTTTTTGCAGTAAGAAGCTAAACATCCAGTATCAGAAGCATCAGTAC---TTTTACTCT----TTCAAAA-------ACAAAAGCA-------------AAGCAAAAGCAAAAACCTGTCATGAGCCCT-------CTGTCTTTGCTGCT-------------ACTTTCAGATTCTCT------------------------------------------------GTGACAAAAGACTGTTACTTTTCACTGAATTCTAATGAGTTG-ACGTAAATAATCAGAACAATTTCTTAAATGCAAAATTGGTCTGGTATCTGT-----CTAAATTGGTCA-----------ATACAAGTGTTATTCTGGAATCATGTAAAAATCACTTACTTTCATAACTGTTTAGAACCCCAAATGTTTTCCCTTTGAAGGGGAA----------------CATCTGTGGAATATGATTTTGAA------TAGAGGACTTCTATGAAATATATTTCAAATCTTAAAAATATTTTT---------AATACTTCCTAAA------GTGGTATA------GGATTTACCCT-CGCTGACTATGCCT------------------------------------------TCCATTTAAGAAC--AGTCTTGCATTTGTGGCTTTTCATTTTCCTTACAGCTC-----------------------TAATTTTATTTAAAAAGCCTGAATACACAAATGACTGCTGCCTT--ACTTAGCATTAAACAGTACTATTTTTTAAACCATGTATACAGCTCAACAGCAAGATTAATAAGTTATAATACACACATATCACTGACA---GATTCATCTTTTTGTTTTTTAGAATTCACGAAATAAACTGTATTCTGGTAAATCCCCTCCCCGCAACAAGAGTGTAATGTACCTACATTGAGGTGTTTAAATATTT-CTCCAACAGTTTT-CATTG--------AATTACATTATGAAAACACTAGGCTTCAAGCCAGGTACTAATAAATATTTAATTTAAAAGAAAGAAAGAAAAAACTCAACACAGAAGAACATAAAAAATCCCTCCCCTCCCTCTCCTCCCACTCCCCCGGGAAGGCGCCCGTGTCAGCCGGACATGGCCGAGATTTCATAGTCACTGGCCGAGGTGAGGGGCTTGCCCATCATCCGGATGTTTTTTGCACTGGTAATCCTGGCCATCATGCACACGGGCTTGTCAAAGTACTTGACCAGGGCAGGCTCAGTTAAGAGGGAGGCCAGGAACTGCTCGAAGGTGATGGCCCAGTCCCGGTCCAGGCTGGTGCTCCGGGGCAGTGCCGCCGTGCCCTGGCCGCTCCGCACCAGGACCGTGTCCTCTCCGATGTCCTCGCAGTGCAGCTTGTCCTCCTCGTGGGAGCCGGCACTCAGCACCGAGTATGAGGACATGGAGCTGTCGTCCTTGGTGTCGTCGTCAGAGATCAGCATGGAGGAGCAGGCCCCGTTGTCCCGGGGCGAGGAGTCCTCCAGCTTGATGTCCTCCATTTGTCCTCCAAGGGAGTGTTC---------------CTCGCTGTCGGGGGCCAGGCTGGCCGGCAGGGGCTCAACAGACTCCACCACGTAAGGCTGGCCTGGCCCTTTCTTGGGGAAGAGCACGCCTGGGATGCCCTGGTGGCAGGACGGCCCACTGCCTCCGCTCCCGCCCTCCTTTGCAGGCTGGGCCACGAACAACTTGCCGACCTCCCCAATCTCCAGCAGGAGGCTGGTCACTGCTGCCGTGGCGTGGTACAGCTCCTGCTCATTGGGGTCTTCGCTGAACATGTTATACATTGTCTTACACAGTTCAATGAACTGCCCCTGAAAAGCGATTTGGAAAAACACAATGTGAAATC----TTGGGGGAGCAG-----AAAGGCAGC-ACTGAAGTGGACTGTAAAGCCATTTAAATGA chr4 + 94230402 30840420 30840419 30842767 30840420 30840419 30842767 2348 AATATTAAAAATCAGATCTGTGCAGT----GTATTTTATTTGTTTACATC--ACCTATTTGTGGTTTAAAACCACTTTATCTGACAGTTTAAAAG-CATTCTTT---TAAAATAAAAAGAAAACACAGCTTCTGCTAAAAATTTGCAAGTTACATGGCTGCAATATACAGGAGTATAAAAAAATTAACAGTATTCTACAGAAAATATTGTCAGAACAGCAAAGAAAGATTAGGCATAGAAGCATGATCCTGAACTGAACAAGTATGAACTATAAAACAGCTAACAAAATTTAAAA--AAATCCTGAATATCCGTATAAAAGAAGCAAGGATTGAAAGTGCAGGTGCTCCAGTTTGCATTTTAACAT--ATTCAGTAAGCTGATACAGGATACTATTCATTTTATATAAAGTGACAG----TGTTCTCAGTAAGACTTAAACATTCAGTTACATTATCTTGCAGCTTTTT----------CATTACCTCTACTTTACACTGTTGTAAATGAAGACTTATGCAATACAGGTTTTTAACTTCTT-AATCTAACAAGGATATAGTAAGTTGGTGGTAAAGGTTA-------------GTTTTAAAAGC--TAAGCTAAATACGCTGTA---GATCCAACTATATACGTTGTGTTCTGGATTTTAAAATTTATTTCTAAAAACATCTCTCAATTTTTAAGGGACTCCACCAATCTGTTTCGGTACCTGCATACACTGTCTTTGGAGCTTAATGGCAGCAAGGCTTCCAAGTCCACTTGCTAGGAGCACAGCTCCGGGCAGGGTCACAATGGAGATTTTCCCTTGGTGGCCGAGGGCTGTCCCTCT--GCTGGGTTTGGTCAAGCTGGAGGTGGTTGAACCGAG-------GCAAAGGCAAATGGACTCTGTGTTCTGTTGGAGCAGAAATCATCATACGTAACAGCATTTACGTGATGCGCCAGCTCAACTTGGGATGCCCTTTCT------ACTTTTGAGTGTACCA------TTCTCAAGCAAGGGAAGTTAGGCCCCAGGCAGGCATCACTGAACT--GATCTTGCACGTACTTGGAAAATGAAAATGAAGCATACGTTAAA------AAATACTATTCTCTCTGGGAATAATAATTAAAAAAAAAGAGCTATATGCAATGAAGTTATCCTGCGGGGATGATGCCTGGAACATAACTTCACCGTGAAGTCCTATTCAGGTTGACAGCGTCCCTTTAAGTTTTAGGTACTACCTCTTTTTTTTTTCTTTTTTCTAATATTTCCCCTCAAGAATCAGATCTCTGCATATGTCTGTTTTAAAA------ATGCACAGA--AATATTGGCATTAAGTTTACATTTAGAAGAACTAATCTTTA--CCATTTA---AAATTGACAGCAAGGTTAATAA-------TACACACACTTCACTGACAACTGATATTTTTTTCTGTATTTT-GAAT-------AAAATTTGCATTCGTGTAA---CATTTCCCACAGAAAGAGTG-ATTATACTT----CAAGACAGTTAAGTATGCACCCCGACATTTTCACATTAGTGAAAACAATGACGTTTTGAAAATACCAAGGCCTGTGCCAGGTACTCATAAATACAGAAT-----AGAAAAAATAAAAAAACCCA----------------------------CTGCCTTTTATCCC------------------------------GACATAGTAGAGATTTCATAGTCACTGGCCGAGGTGATTGGTTTACCCATCATCCTGACATTTTTAGCATTAGTAATCCTAGCCATCATAGACACAGGCTTATCAAAGTACCTAACCAGCGCTGGCTCAGTCAAAAGGGAGGCTAAAAACTGTTCGAAGGTGATGGCCCAGTCCCTGTCAATGCTAGTGCTCCTATGAAGAGAAGTGGTG---TGGTTGCTCCGTACTAAAACAGTGTCTTCACCGATGTCCTCGCAATGCAGCTTTTCTTCTTCATGCGAACCTGCACTCAGCACCGAGTAGGAGGACATCGAACTATCATCTTTCGTATCGTCATCAGAAATGAGCATGGAAGAACAGGCTCCGTTGTCCCTGGGAGAAGAGTCTTCAAGTTTAATGTCTTCCATTTGCATGCCCAGGGTGCTCTCAGTGCAAATGGCCTGCTCGTCGTCAGTGACCAGGCTGCCTTGGAAGGTCTTGTGCTGTTCAAGGGGGTACTGCTGGCTG---TCTTTCTTCTGAAACAGCTCGCTCTGAATAGCTTTGCTGCAA------CTGTTACTGCTGCTGTCTGCCTCTTTTGTGGGCTGTACTGAGAAGAGCTTACCAACTTCACCTATCTCCAAAAGCAAGCTTGTCACAGCAGCAGTAGCATGGTACAGATCTTGTTCGTTGGGGTCTTCACTGAACATGTTATACATTGTCTTGCACAGTTCAATGAACTGTCCCT--------------ACAAACAGAAAGAGGAAGCATTACTGAGAGAGCAGGAAACAAATTCAGCTACTGAGATCTA--GTAAATCAGTTTAAAAGA ..x..x....::::x.....x.:.x.----..............:....:--:........x....-..x..:....:..:.............:-...:..x.---..:........:x..xx:....xx:x........------------.x..x::....:..:.:x.:x.....::...-------:.x:.:x.::.......-:..:.:x.......:..--------..:::.x......:x....:.x.....x:.-...xx.x...x.:x.:....xxxx.x....--...x:.xx..:.x:x:..x............:...x.............x.:..:..x.....:x....--......x..----...x..x.........-.................:----....:.:.---------..........................x.....----------.....:......x..:xx:..x..x...x:x:.x.x.....:...::x.x.x.x..:.....-......xx:..:...::.x..-----........x.x.-------------.....x:x..:--x........:.:x.x...---..xx..x.x:..:---..x.::...----..:....-------x:....:..-------------...x:.xxx..xx..:....:x:.:xx...-------.........xx...-------------:...:..::.:.x..------------------------------------------------...:.x:.:.:....:x..:.--:...::..:x:x::..:..-.x..::x.:.x.x..:-------x:...x.....xxx:x....xxx.....-----.x:..x.x:...-----------..x:.x...x.::x.::.xx:x.:x.:::.xx.x...x..------...x..x..x::x...------...:.xxxx.....:.:----------------....xx..:.x.--...:...x.------.:..::.:xxxx.....::...:x.:...------.....:.x..---------....x.xx:....------.x.x....------.:.x...:...-..xx..:x......------------------------------------------...x......xx:--:..x:.:.x.:.x.xx:.....x....:..x.:.x:..-----------------------..xx.:.:...x....------..:....:.--.x.::..x.x.--.x..x:....x.:x..x....x.:....--....x..---.:x.::........:.......-------........:x.........---...x:x.:...:...x....-....-------.x..x:..:....xx....---.x:.:...:..:x.......-.x.:...:.----::..:::x....:...x:-.:..:...x...:-....:--------...x..:..x......:..:.:.x::::x..........x.......:xx...-----.....:..x:.......:..----------------------------..x...:.:x....------------------------------.....:.:x............................xx..:..:..........x..::.....x...:.:........:........:x....:.....:.........:.:.....x..x........:..:........:.::.....:......................x...x.x...:.......x:x.x..x.xx.:x...---...::......:..:.::..x.....:..x..............:........x..:..:..:..x..:..x.................x........x..:..:..:..:..x..:.....:.....:..x........:..:.....:..........x...x..:.....:..x..:..:.....:........:x:x..x....x.:x:..---------------....::...:.x.:........x.:x.x.:..x..::xxxx::..x.xx:x...xx......:x---:.......xx.:..x...x...::x.:..:x.:.x.:x...:------.:::.:.:x.:...x:.xx....:....::.....x:.::x...x.:...:..:..:..x..x.......:x..x.:...x.....x..x..x..:..:........x..:..:..:...........:.......................:.................:....--------------.x.....x..x.x.:..x.----:..:.:......-----...xx....-.....::.xx.--.....x.x:......x.. 26M4D20M2D14M1I28M1D8M3D34M12I31M7I17M1I17M8I30M1I30M2D69M2D9M4I16M1I18M4D8M9I32M10D62M1D21M5I12M13D11M2D18M3D13M3I9M4I7M7I9M13I30M7I14M13I15M48I21M2D19M1I16M7D28M5I12M11I40M6D16M6D17M16I12M2D9M6I29M6D10M9I13M6I8M6I11M1I14M42I13M2I38M23I16M6D9M2D11M2I28M2D7M3D22M7D19M3I20M1D4M7D19M3D20M1D9M4D18M1I13M1I5M8I53M5D20M28D14M30D210M3D215M15I64M3D42M6D175M14D19M4I12M5I9M1I11M2D18M 1444/2036 70.9% 2348/94230402 0.0% 515/2036 25.3% 109780346 80434209 +10490 chr4 + 190214555 140624113 140624112 140624551 439 TACCTGATTTAATTTGGGTAAATCCTTTGCATTCTTTGACTTAGATTTATTTTCTGGAGTCCACAGTCTCAAATAATTACGATTTTCTTGGGAATTTGCTCTCTTCCCTACAACCCAAATGTCAAGAAAT-------AAGTGCTTACAG---------GCCAA-----------------AAAACAAGTGTACAACCAGCAAGAAGGTAAACATATA--------GAAGAGAATATCCTTACCTTTGTCTGGCTTTAGGCTCACCGTAACAAAGCCATCATCTGCACCCTGTTTGCTTCTGCTATCCAATCCAACAACTACCAAG-AAATGGTTCAGAAGAAAAA--AGTAGAATGTTATATAATATGACCATGGAATTAGCATTTGTAGTGGAAAATAGAAGACTCTCTAAGTAGGGTTGCCTGATTTAGCAAACAAACAAACAAAAAAAAACTCCTCAAAACAAAACAAAACATTCAGTTA chr4 + 94230402 30843633 30843632 30844090 30843633 30843632 30844090 458 TACCTGGTTCAGCTTGGGCAAATCCTTTGAGTTTTTTGCTTTGGATTTATTCTCTTGGCTCCACATTCTCAGATAATTTCGATTCTCTTGTGAACTCTTCTTGCCTATTATGAACAAATTACCCAGAGATGCAAGAAAAGTCCATGAAGAAACCTTAAGTTAATACCTTTTTCCATTTCCAAAAGGAGTAT---CTTGTCAAGAAATTAAAGATGTAACTCAGAGGGAGACAACGTGCATACCTTTGTCTGTTTTCAGACTCACTGTAACAAATCCATCATCTACTCCTTGTTTGTTCCTGCTGTCCAGACCAACAACTAGAAAATAGAAGGGTGGGGAGAGAGACCATTGTGGTTTTACAC-CTATAA--ATAGATTTCAGGTGTACAGTATAAAATAAAGAATGTTC----------------ACTTTGC---TGAAAATGCAGAGAAAAAATGCTAGAAATTAGCCATGACATTCATTTA ......:..:.::.....:..........x:..:....x:..:........:...x.:x......x.....:......x.....:.....x...:.:x:::.x:::x:..::.x.x..x.::.x...:..-------....x.x.:x..---------.::..-----------------....x:...:.---x:::x......:x....x..:..--------.:...x..::.x.x............x:..:..:.....:........x.........:.x..:......:.:.....:....:x..........xx..:-.:.x..x.x:.:...:.:.--.x.:x::.x...:.:-x...:.--..:..x..x:x:.x.::...:x......:.::.:x:..----------------.:..x..---::..x.x:..:.:.....x.x..x:...:x.:x..x:.......x... 130M7I12M9I5M17I11M3D23M8I100M1I19M2I15M1D6M2D38M16D7M3D48M 277/414 66.9% 458/94230402 0.0% 69/414 16.7% 109780480 80434075 +7290 chr4 + 190214555 140627425 140627424 140627532 108 GAGAAAAGTCACTTACCATGTGTACATTCTGGGGTAATATCTTCAAAGAAGTACTGAGTTGCTTCAAAAGCAGAATCTGGTTCATCTTGATCAGAGGATGGCTCTAGG chr4 + 94230402 30844958 30844957 30845065 30844958 30844957 30845065 108 GACAAAAGATGCCTACCATGCGTACATTCTGGTGTGATGTCTTCAAAAAAGTACTGCGTGGCTTCAAAAGCAGAGTCTGGTTCCTCTTGCTCAGGGGATGGATCTAAG ..x.....x::.:.......:...........x..:..:........:........x..x..............:........x.....x....:......x....:. 108M 90/108 83.3% 108/94230402 0.0% 0/108 0.0% 109782467 80432088 +5999 chr4 + 190214555 140628249 140628248 140628370 122 AAGCCAGGTCATGGTTACAGACACAAGTACTGCTCCATGTAGCTCACTCACCAGGCAAGACGTGCATTTTGTACAGGAGTTTGAGCTTCTCTGTGAGGTCCCCATGGCATGCAGCACCTAGA chr4 + 94230402 30846246 30846245 30846365 30846246 30846245 30846365 120 AAGTTCAGTTCTTGCCACAAAGACAGCTATT--TTAATATAATTTACTTACCAGGCAAAACATGCATTTTATACAGTAGCTTTAGCTTCTCTGTAAGATCGCCATGGCATGCTGCACCTAAA ...::x:..:x.x.::...:.x...:x..:.--.:x..:..::.:...:.........:..:........:.....x..:..x...........:..:..x...........x.......:. 31M2D89M 88/120 73.3% 120/94230402 0.0% 2/120 1.7% 109782003 80432552 +16882 chr4 + 190214555 140633909 140633908 140634193 285 CATCCCATCCCAACTCATGCAATAGTACCACG-----TCCTTACTTAGCCCAGAGACAAACTCCCGGAAGTTAATCAAAGAGTCTCCATTTTCATCTAATAACTGGAACAAGCGGGAGGCCAGAACGTCAGAGTGAGTTCCACATGCCCAAGGAAAGAGAAGAGCAAACATTCCCTTGAACTGCTCGAAGTCAATGCGATACTGTTCCAGGTAGGGCAGGCTGGGGTCATGCCGGTCCAGCGCGTTGCTGCTCCCGCCCCAGTAGCAGCTGGTGAGATGTTCTGCCTGAA chr4 + 94230402 30849712 30849711 30850001 30849712 30849711 30850001 290 CATCCTAGTCAGATTATTTTAAGAGTGCTGTGAATTCTCCTTACTTAGCCCAGACACGAATTCACGGAAGTTGATGAGCAAGTCTCCATTTTCATCAAGAAGTCTGAATAAGCGTGCAGCCAATACATCTGAATGAGTTCCACATGCCCAAGGAAAGAGGAGTGCAAACATCCCCTTGAACTGCTCAAAATCAATCCGGTACTGTTCCAGATAAGGCAGGCTGGGATCATGACGGTCAATAGCATTGCTGTTTCCTCCCCAGTAGCAGCTAGTCAGATGTTCTGCCTGAA .....:.x:.x:.:.xx.x:..x...:.:::.-----.................x..:..:..x........:..x.:x:................x.:x.:::x...:.....x.x:....:x..:..x..:..........................:..x........:..............:..:.....x..:...........:..:...........:.....x.....x.xx..:......:.:..x..............:..x................ 32M5I253M 225/285 78.9% 290/94230402 0.0% 5/285 1.8% 109784197 80430358 +3065 chr4 + 190214555 140635477 140635476 140635539 63 GTCTTAAAAAAATAAAACTAAAAAAGAAGAAAGAAAAATTACTTTTGAAAATCCTTCTCTTTT chr4 + 94230402 54051897 54051896 54051959 54051897 54051896 54051959 63 GTGTTAAAGAAATGAAATAGAAAAAAAAGACAGAAAAATTTGTTCAAGTAATCCTTTTTTTTT ..x.....:....:...:x:.....:....x.........xx..:x::x.......:.:.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 86583580 NA +11333 chr4 + 190214555 140639082 140639081 140639430 349 TCACCTTGAAAAGAGCATAAAGTTCTTCCAGCTCATCAATGGTAAAGGAAGTTTCTGTCACAATGGTTCGTACCTATAAAAATATTAAGCAAAATGAATTTCACAAACTCAAAAAGTGCCATGCTGGGAAAATCCCTAATTTTTCCCTTTCAAATTGTTTTCAGTTCTGTCAGGCAGGAATCCACAGCCAGCAGGAGTGTGA-----AGAAGGAAGATGACAGAGGTTGCCTGCTACTTCTTAAAGGACTTACCACGTTGCGTTTCGTAGTATCCTCCAGCGTCTGGATCACTTTCAGTCTCTGTTTGAATCTCATCTGTTCAATCAAATCTGCCCGGATAGTTCCGAATTTCT chr4 + 94230402 30851175 30851174 30851470 30851175 30851174 30851470 296 TTACCTTGAAAAGAGCATACAGTTCCTCCAATTCATCAATAGTGAAAGAAGTCTCTGTCACAATGGTTCGTACCTTTTGAAA-------------------CATAACATTGACAGCTGTTACACATCTGAAATCC---ATGTCTCACAAT-AAGCTAAATTTAGTT---TCAGAAACGGAT------------GGACTTTAATCTTTACAAAGAACATTA--------------------TTCCAGTACTTACCACGTTGCGCTTTGTAGTGTCTTCAAGGGTTTGGATAACTTTCAGCCTTTGTTTGAATCTCATTTGTTCGATCAAATCTGCTCGGATACTTCCAAATTTCT .:.................x.....:....::........:..:..:.....:......................x.x:...-------------------..:..xx.::.x.:x..::.::.xxxx:......---..x.:..x.xx.-..::.:xx..:....---....:x.x.:..------------...x.x.:.-----.x..:...x..x.--------------------..xx..x...............:..:.....:..:..x..x..:.....x........:..:..............:.....:...........:......x....:....... 82M19D34M3D12M1D15M3D12M12D9M5I13M20D114M 222/291 76.3% 296/94230402 0.0% 63/291 21.6% 109787907 80426648 +3260 chr4 + 190214555 140648373 140648372 140648417 45 AGTTTTGTTGTTGTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTA chr4 + 94230402 39803624 39803623 39803668 39803624 39803623 39803668 45 AGTTTTGTTGCTGTTTTTTTTTTTTTTTTTTAAGCCAGTATTTTA ..........:....................:..x...x:.:... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 100844749 89369806 +4125 chr4 + 190214555 140652105 140652104 140652183 79 GTGGTGCACGCCTGTAGTTTCAGCTACTTGGGAGGCTGAGACATGAGAATCACATGAACCCCGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--.......:..........::........x.x..x...x...x.......x.:..x.xx:..:..:.. 10M2D67M 61/77 79.2% 77/94230402 0.0% 2/77 2.6% 64618904 NA +10136 chr4 + 190214555 140657092 140657091 140657377 286 CCTACCTCGTAGGAAGTTCTGATGAGTCTAAAGATGTCTACCTCAGGGTAAGGTTCCACATCATCGCTGAGCAAGGAGTGGAGGTGAGGAATGGGAGGCAGTGTGCTGTCTTTATTGGTCACACTGTCTAAATACCTGG-AAGAAGAATGCATCAGAAGTCACAGGAGAAGAAACTGGAATCCTCCCATTATAAT-TCTCCAATCATTTTCTGCAAGTTCTACATTTTAAAACAAAGGACTAGAGTTTCTTTAAAGATGGAAAGAGAGAAAGAAATTCTGTTAATTTC chr4 + 94230402 30852843 30852842 30853107 30852843 30852842 30853107 265 CCTACCTCATAGGAAGATCTGATCAATCTGAAGATATCCACCTCGGGATAAGGCTCTACATCATCACTGAGCAGTGAGTGAAGGTGAGGAATGGGTGGAAGAGTGCTGTCCTTATTAGTGACACTGTCCAAATACCTGGTGAGAA---------AGAGAAAACGAAATAAGAAACCTAAG--ATTCAATTGTACTCCCTCCCATCCT-------AGGGCCAATAGAATAAGGGTAACAAATAGA-----TTAAATGAAAAAAAGAAAAAAAAAAAGATTGCTAACTTC ........:.......x......x.:...:.....:..:.....:..:.....:..:........:.......:x.....:..............x..x..x........:.....:..x........:..........-:....---------...::xx..:::.x.......:x:.:--x.:.x...:..x.-:....x...x.-------.:.x:.x.:.xxx...::xx..x:.x....-----..x..x..x::.....:.:...:...xx:..:...:... 139M1I5M9D26M2D13M1I11M7D30M5D39M 192/263 73.0% 265/94230402 0.0% 25/263 9.5% 109804249 80410306 +20040 chr4 + 190214555 140657466 140657465 140657816 351 GAAGAGAAAGCATGAGGAAGAAAACCGGAGATGGTTTTCAAAGTTAGGCTTAGTACAATACCTTCCCAAAACGGTCATGGCCTCCCCATCATCCTTGCAGTTCAACAGTTTGTCCACATTTGCATCCAGCACAGCTAGGGCCAACTGGAATATCACTTTAATTCCTTCATAGAAGAAACAGTCAACAACCACAACTGCACTCTCAAAAGGCATCACACTGAGAAATAGTGTGAGGAACCAAGACAGGGAGATGGTGGAAATCACGCCCAGGTCTTGCATGCAGTCGTACAGCTGTGGGACGTAGTCTCGTGCTAGCTCCTCAAAGACACCTTGGTCCACCAGTGCACCTGT chr4 + 94230402 30854184 30854183 30854525 30854184 30854183 30854525 342 GAAAAGGAAGCA---AAAAGAAAAATGAAGATGCTT-----GATTTTCTGTAATA-AATACCTTCCCAAGACTGTCATGGCTTCTCCATCGTCTTTGCAATTAAGCAGCTTGTCTACATTAGCATCGAGGACAGCAAGTGCTAACTGAAATATCACCTTTATTCCTTCACAGAAGAAACAATCCACAACCACCACAGCACTCTCAAATGGCATTACACTGAGGAAAAGAGTGAGGAACCAGGACAGGGAAATAGTGGATATTACACCCAAGTCCTGCATGCAGTCATAAAGCTGAGGAACATAGTCACGAGCCAATTCTTCAAAGACACCCTGATCCACCAGCGCTCCTGT ...:..:.....---::.......x:.:.....x..-----::..xxx:x..:..-.............:..x........:..:.....:..:.....:..x.:...:.....:.....x.....x..x.....x..x..:.....:........:..x.........:..........:..x........x..x...........x.....:........:..x..x...........:........:..:.....x..:..:....:...:...........:..x.....x..:..:.....x..x..:.::..:...........:..:........:..x..... 12M3D21M5D14M1D295M 273/342 79.8% 342/94230402 0.0% 9/342 2.6% 109803282 80411273 +9402 chr4 + 190214555 140659585 140659584 140659721 137 TACCCACAACTCTGGTGTTGTAGTAATCTGGGAGCATGCGCTCACACAAAGCCACAAGCAGCCAGAAAGCTTCCTCCTCTTTGGCATAAAGCAGCAGCACTGAAGTGACAATATTCATGGCCTAAAAAAGTGAAAGA chr4 + 94230402 30855397 30855396 30855533 30855397 30855396 30855533 137 TACCAACAACTCTTGTGTTATAGTAGTCAGGTAGCATACGTTCACACAGAGCGACCAGCAGCCAGAAAGCTTCCTCCTCTTTTGCATAAAGGAGAAGTACTGAAGTGACAATATTCATAGCCTAAAAGAAGGACAAA ....x........x.....:.....:..x..x.....:..:.......:...x..x..........................x........x..x..:....................:........:.:x..x.:. 137M 116/137 84.7% 137/94230402 0.0% 0/137 0.0% 109804188 80410367 +15589 chr4 + 190214555 140661889 140661888 140662113 225 TTACCTGGCAATACCCTATGTTGGGATTTCGAAAAGCATAAGCTGTTAAGACTCTCCTTAGTGCAGCAATGCCCATTTCATTCTGAAAAGCTGGGTGTTCTGGAAGGGAGCGGTGTAAATCCCTCTCAATCTCCTCCGTGGCGAGATTATACTTCCCCATGGACTTCTCCACTAGGTCTTCATAGTACCCAGGATGTGTGGCCTTCTCATTGATGGCACCTGAGA chr4 + 94230402 30857083 30857082 30857307 30857083 30857082 30857307 225 TTACCTGACAATATCCTATGTTTGGATTTCTAAAAGCATAAGCTGTCAACACTCTCCGTAGAGCAGCAATACCCATCTCATTCTGGAACGCAGGGTGTTCTGGGAGAGAGCGGTGCAGATCCCTCTCTATTTCTTCTGTAGCAAGATTATACTTCCCCATTGATCTTTCCACTAGGTCCTCATAATAGCCAGGATGAGTGGCCATTTCATTAATGGCTCCTAGGA .......:.....:........x.......x...............:..x.......x...x........:.....:........:..x..x...........:..:........:.:.........x..:..:..:..:..:.................x..::.:...........:.....:..x........x......x.:.....:.....x...::.. 225M 188/225 83.6% 225/94230402 0.0% 0/225 0.0% 109804806 80409749 +13656 chr4 + 190214555 140668914 140668913 140669830 917 TACCTGACAGCAGCAGCCAGAGCTCCCCACGCATGCTCTCCGGGATGCCCTTCAACACCAGCTCCCGCGTTTTCTCTGTGCGGTACATGCAGATCCCTTGCCCATACTCAGCAAAGTGAATCTTCCAGGCTTGCTCTTTCAGAAACTCTTTGGCCTGAAAGGGATAATGAAACATTATGA-------------CATCCAAAGTACCCTGAGGATGGTAAGAGAAGAGTGATGGAAGGTCAGAACATGTTCCCTGCTGAACGGAGTGACAATTCCAGAAAGAAGTCATGAGAAAAAGGAACTCAGATTTTCTGGAGTTCTTCTCTAGTTTTATACATCTATCATGGCCTACAGCTCTGCCATGAAGCTTTTGGGCCCAGAGTCAGAATCCTACTTACCTGAGATTGTATTTATGGTTTTATGTCTGCACCCCCAAGTGAAAGTAAGTTAATGATGTTTAAATATGGGCTGAGAAATCGGGTATTTATTTGTTGGTTTAACTTAAGCAAGAGTTAAAAACAAAACAAGACCAAAAGAAGTCACCTGTACCCTCTATAACTCATCTCC---------TTCCATGAAGC-----------CACTGTGAAAGTTATAACATATTTAGACAAAAATCTGCTTAACTTATAGGAAA---ATCTCCATTTACATAGGCATGTGTGAATTTACTTACAGTAAAAAA---------TATTG--TTAATGGCATT--GTTCAAATC---TACAAAGTTTCAGGGAAAAGTGAGAGGCACC----------CACCAATTTCGGGTTGAACTCCTCGGGAGACCGCCGCCGATACATGGTCATCAGGGTCTGTGTGGCTGTGGGGACGCTGTTGCCATTTAGGTTAAACTGGCGCTCTCCATCAGCATCAGAGCTCGTGCTTCTCTGGGGGCTGGAGGAGACGAGGCTGCTGGGTCGAGAGTACACCTGTCAATA-CAGAGAGGAACAAGACA chr4 + 94230402 30858369 30858368 30859173 30858369 30858368 30859173 805 TACCTGAAAACAGCAGCCAGAGTTCCCCTCTCATGCTTTCTGGAATGCCCTTCAGCACAAGGTCTCTAGTCTTCTCTGTCCGATACATACACACTCCTTGGCCATATTCAGCAAAGTGAATCTTCCAGGCCTGTTCTTTCAAAAACTCTTTAGCCTAACAGCAATGAAAGAAATGCATGAAGATGCTGTTCCTCCTTCTAACTGCCCCACTGA------------AATGCAAGGAGCTAAAAGCCTGT--CATGTTTAAC------------TCATAAAGAAAGCAATAAATAA--------------CCTGG-------TTACAGTCTAATTCACTTATTA------ACAG-GCTGC-------CTTTT-------------------TCCTTTTCTTAATTCCTATCT----TTTCAGACTT-------------------------TGCTGTTAAAA----------------GAATACTTTTGAAGCAGCTGTACTTGAG----------------AACAGG------------CATGCAAACTCTCCTTGATTTACATCCAACTCTGCTTTTTATGTAGCAAAGTAGTTCGTACTGGTAGAGCAACAGCACATGTAA---------TGCTTTATTTTTGTGAAAAATACTGCCTCTTGTAGAGAC-------------CTTACTGTGGCAGAATGGAGCTTTCTTGGCTCAAAAGCATTTATTTTAAAGCAAATATAACTTTTCTCAGACAAGCACAGGGCTCCAAGACATTTTTACCAGTTTGGGGTTGAACTCCTCAGGTGACCTTCGTCGATACATAGTCATTAAAGCTTGAGTTGCTGTTGGAATGCCGTTGCCATTGAGATTGAACTGTCGTTCTCCTTCTGACTCAGAGCTGAGGCTTTTATGAGTGCTGGCAGAAACAATACTATTTGATCTTGTAAACACCTGTAGAAACCAGTCACAAACAATACA .......x.:............:.....x.x......:..:..:..........:...x..x..:.xx..:........x..:.....:..x.::.....x.....:.......................:..:.......:.........:....:.x..x:..:.x::..xxx:....-------------.x.:.x..x.:...::xx..------------.:..xx:.:..x.x.:.:.x...--.x..:.x...------------:..x......:x..xx.:.x..--------------:....-------:.x:...:.x..x..::...:.------....-x....-------.....-------------------.x...x:..x.:x.:x...:.----...:.x:::.-------------------------..x....x...----------------.::..:..x.xx:x::.:.xx....:..----------------....:.------------..:x::x..:...:x.:.:.:.:x...---------..::...x...-----------:....xx.:..:x.:.:..:..x..:---------.....x.:..x.:x....---.::x..x:..::.x..:.-------------.....x..::x.:.---------.x...--.:..x:.....--x..:...x.---..:..xx....xx:..x...::x::...x..----------:....:...x..............:..x....x:..:........:.....:.::.::..x..x.....x..:.:..:.........x..:..:.....x..:.....x..x.xx........x:x....:.x..:.x.....x:..:..:.x:..::.x.:..xx.x:x........x:.x.-...xx.x:.....x... 180M13I20M12D23M2D10M12D22M14D5M7D22M6D4M1D5M7D5M19D21M4D10M25D11M16D28M16D6M12D27M9I11M11I26M9D18M3I18M13D14M9I5M2I11M2I9M3I31M10I183M1I17M 506/742 68.2% 805/94230402 0.0% 238/742 32.1% 109810545 80404010 +13943 chr4 + 190214555 140670700 140670699 140670940 241 TTCAGGTGTCTCCC-ACAGACCTCATCATCTGAACTGTTGTAACTTCCTGCAAACTCCTTGTCAGAATATATTTTGGAAGTAGTCTGTTGCAGGAAATCTGAGATCCTCTGCACTAGAAAGTCTCTATCTTTCAAGTTGGCAAATAGGAAGGTCATCCTGTTTCGGGTGCTGATGGATAAGGGACTGGGGAGCACACTGGAGCTGTCTGCCTTTTCCACAATTGTCACCTGAAAAGAAGTGG chr4 + 94230402 30860598 30860597 30860839 30860598 30860597 30860839 242 TTCATGTTCCCCTCTACATACCTCGTCATCAGAGCTGATATAGCTTCCAGACATATTTTTTTCCAAGTATATTTTTGAGGTGGTTTGTTGCAGGAAATCTGAGATCCTCTGTACAAGAAAGTCTCGGTCTTTCAAGTTGGCAAACAGGAATGTCATTCTGTTTTTAGTGCTGATCGACAGCGGGCTGGGCAACACACTGGAGCTATCTGCCTTTTCCACTATTGTCACCTAGGGAGAAACAG ....x..x:.:.:.-...x.....:.....x..:...x.:..:.....x.xx.xx.::..x..x:.:........x..:..:..:..........................:..x..........x:.................:.....x.....:......:x:........x..:.:x..:.....x.:............:..............x..........::::....:::. 14M1I227M 188/241 78.0% 242/94230402 0.0% 1/241 0.4% 109810102 80404453 +16022 chr4 + 190214555 140676883 140676882 140677142 260 CAGATACTTACCTCACGGAGCGGGATAATGAGGCTACATAAGTTCTCCTCCTTGCTGGTAAAACAGATGTAATTTGTGGACACAAACATCTGCCCCAAAATGTGCATTTTGTTAAATGGAGTCCAGAGAGTGCAGTCTGTGTGGCCATCTAATTTTTCATCTTTGGGCAGCCGGAAAAGTGCACGGTATCTCTCACTCTTTGCCCTGGCATCAAGATCACT--GGAAAGCAATAATTACAATTCACATAAGAAAAATGTTTC chr4 + 94230402 30863414 30863413 30863670 30863414 30863413 30863670 257 CAAGTATTTACCTCTCGAAGAGGGATAATAAGGCTGCACAAGTTCTCTTCCTTACTAGTAAAGCAGATGTAGTTTGTAGAAACAAACATCTGACCCAAAATATGCATTTTGTTGAATGGAGTCCACAAAGTACAGTCTGTGTGTCCATCTAGTTTCTCATCCTTTGGAAGTCGGAACAATGCACGGTACCTCTCACTCTTTGCTCTGGCATCAAGATCTCTACAGCAAACAAAGAACACA----CCATAA-AAAACTGTTTC ..::..:.......x..:..x........:.....:..:........:.....:..:.....:........:.....:..x...........x........:...........:...........x.:...:...........x.......:...:.....:..x..x..:.....x.:.........:..............:..............x..--:.x..:...x:.x:...----x.....-....x...... 221M2I17M4D6M1D11M 212/255 83.1% 257/94230402 0.0% 7/255 2.7% 109813469 80401086 +19678 chr4 + 190214555 140678924 140678923 140679885 962 AAGGTCTCTATCACCCACCGTTTTAGAGCAGACACTTTTTTAGGAGATTTCCTTTTGAGTTTGGGCAGGGATCGATCTTGTTCAAATCCCTCATTGTCTAAGAGTTGCCTCATGGCTATGTTGGCAAGCTGCTCCATTAACTTGAAGGTCTCGTTGATGTTGAGGAATACAGAGAAGAAATGCTCACTGGACCGTGTGCTCACTTTGATCACATCAGGCAGAAGCAGGGTGGCATTCTTCTCAAGCTGAGTGATGTCTACCCACCGGATGACCAGTTTCGCTGAGCACAAGGA------------------------------------ACAAGCCTGGGTCAACATCTGATTCCTG-AAAACGCTTTCA------------------------------------------AGATATTGCAG-TCTCACAACCCCACTCCCCCATCCCAC----------TGAACTCCTTTGAGTTTATAATACC----ATATTTGTTTTGCTTGTTCATTTTAAGA---GGTAAATCTGGGCCA-------------TGT------------------------------------------------------GAATTCTGAG---GTCAG------------------------AATTATAG--ATTTAAT---CCATGTCT---ACTGAATT---AATTACACCTTTAGTGAATCTTTA--------------TTACTTAGTGACCATT------TTG---AACTGAAAAATAATTA-AATTCACTTCA-GTAGTAAAAAAAAATTAGTATTGACTTAGTT--ATAACTATAGATTTATTTCTGATATTTTGATGTGGTTT-----------------------------------ATGAGTTCAGGGCAAACCTCAGTAGACTTTCCAAA----GTTTCCTGCTGAAATTTTAGATGAC-TTACCTTCCCTTCCCA----------TAAGAAAAGAATA--AAAGCAAAGGTGGTT-------AATGCTGAGGTACATCCAACCCTG---------ACGGGGGACCTTCCCCTTCCAATAGCTGCAAGAGTAATAG--------------------------------TTGACGAG-------------------------------------------TTTCTCTTCCTCTGGCATCCCAAACAGCCTATGAAATTTCACAATGGCTTCTTTAAACTTCTCCGTGTCATCATCTTCCTTTACATCATTGATTTTGTTGTATTCTGCAATGATGCCCTAATAAGGAATAAAACACAAAGCACACAACTGGTATTAATA chr4 + 94230402 30864785 30864784 30866098 30864785 30864784 30866098 1314 AGGGTCAGTGCTACTCACCGTTTCAGTGCAGACACTTTTTTGGGAGATTTCCTTTTCAGTTTGGGTAATGACCTGTCTTGTTCAAACCCTTCGTTGTCCAAAAGTTGTCGCATAGCTATGTTGGCAAGCTGTTCCATTAGTTTAAATGTCTCACTGATATTAAGGAATACTGAGAAGAAGTGTTCACTGGACCTGGTGCTCACTTTGATCATATCAGGGAAGAGCAGAGTAGCATTCTTCTCAAGTTGAGTGATATCAACCCAACGGATAACTAACTTTGCTGAACAGAAGCAAACAAAAATACACAGTCCAAAAAGGTTAGTATATTCAAAAGCAT---TCATCTTCCAGTTACTATAAAATGTATTCAGTTGAAATTTTCTTGCACCTTGAAAAGTTAGAAGGACAGCATAAATGACACAGCTGGTATAAACAAACTACATCACCTGACAAACAGTAGATAAAA------GAGTTTA-AATATCATTTATTTCTGTACTGAACGCCCACATGAAAGCACAACAAAGCTGGGCTAACATAATTCACGCTGTCACAGCACTTGCCCAGACTCTTGATGTTCTCTCTTCCTAGGAAAGCAAGGGAACGTATTTTGAACACGTCAGACAGGCTTCCCGCTACTCCTCAACAATTGAAGCAATTTAATAAACTGTATTTATCACTGGATTTTGAAACAT-CCTTAATTCAATCATAATACAGCATCCTACTTCACTTAAAAACAGATAAGTACTTGAGCAACTGGACAAGAATCATAAAACATTTCGTGCATTAAAAAAAAA--AATAATCACTGCATTCAAGGATGATAGATTTAATACTGCCATTGTGCCGGTGCTTAGTCAGCCCCTCCTGACATGCAACCAAATAAGGCAACAAGTGCACAGTTAAGCACCATGGACAACCAAGGAACTGCTCCTTGCTTCTACTTCACTCAGCGTTGCTTTTGCATCCCAAATACGTCAGCACGCAAATAGTAACAAACTACAGAAGACTCCCTAACAATTCTGAGATGCACAAACCACCATTTCAATGTAAAACGTACCTTCCCGTCCCATTAG--GAAAGAATAAAAGCAAAGGTGATTAATGCTGAGATACACCCAGCCCTGACGAGGAACCTTCCCCTTCCAGTAACTGCAAGAGTAGTAGTTCACTAATTTCTCTTCTTCTGGCATCCCAAACAGCTTGTGAAACTTCACTATGGCTTCCTTAAACTTTTCTGTATCATCATCCTCCTTGATGCCATTGATTTTGTTGTACTCAGCAATGATACCCTAGAAGGGAGTGAAA---GAAGTACACAGT--ATATTAACA .:....xx.:::..:........:..x..............:..............x........:.:x..:.x:...........:..:..:.....:..:.....:.x...:.................:.......::..:..x.....::....:..:........x........:..:..........xx................:......x.::.....:..:..............:........:..x.....x.....:..:.::..:.....:..x...x.------------------------------------.x....x.---...x.x..:::..x..:-....:.:x....------------------------------------------.:..:x::...-.xx:.:..x.xx...x.x:..:.:x..----------.:..x------.......-....:.----..x.:...x:..xx:.::..:x.x..::---:::...x......:.-------------...------------------------------------------------------.x...:...:---.....------------------------....:x..--.......---.::.:.:.---....:...---..x:.:-....x.x.x....x.x.--------------.:.....:x:..x:x.------...---.....:.x..x...:.-..xx..:...:-.:.x..........--.:..x.x...xx:..--.x:.:x.........x.x...x:...x..x:.xx.:..-----------------------------------.::...x..x:.:x..x.x.x:.:...xx:.x.::----.:.:.:....xxx.:..:.xx:::.-..:.:..:x.x.....----------:.x.x...x.:..--...x:.x..:x.::.-------...x.....:.:..:xx.x.x.::---------.x::x.x........x.:...x...--.x....:...x..--------------------------------:.......-------------------------------------------.........:..................:.:.....:.....x........:........:..:..:........:.....x.:::................:..x........:.....:x.:...:.:...---:...:.....::--:......:. 293M36I8M3D17M1I12M42I11M1I27M10I5M6D7M1D6M4I28M3I15M13I3M54I10M3I5M24I8M2I7M3I8M3I8M3I6M1D17M14I16M6I3M3I16M1I11M1I14M2D15M2I38M35I35M4I25M1I16M10I13M2I15M7I24M9I25M2D13M32I8M43I133M3D12M2D9M 680/942 72.2% 1314/94230402 0.0% 392/942 41.6% 109814139 80400416 +9073 chr4 + 190214555 140679563 140679562 140679737 175 CAAACCTCAGTAGACTTTCCAAAGTTTCC----TGCTGAAAT-----TTTAGATG----ACTTACCTTCCCTTCCCATAAGAAAAGAATAAAAGCAAAGGTGGTTAATGCTGAGGTACATCCAACCCTGACGGGGGACCTTCCCCTTCCAATAGCTGCAAGAGTAATAGTTGACGAG--TTTCTCTTCCT chr4 + 94230402 30865768 30865767 30865957 30865768 30865767 30865957 190 CAAACTACAGAAGACTCCCTAACAATTCTGAGATGCACAAACCACCATTTCAATGTAAAACGTACCTTCCCGTCCCATTAGGAAAGAATAAAAGCAAAGGTGATTAATGCTGAGATACACCCAGCCCTGACGAGGAACCTTCCCCTTCCAGTAACTGCAAGAGTAGTAGTTCACTAATTTCTCTTCTTCT .....:x...x.....::.:..x:x...:----...xx...:-----...x:...----..x.........x......x..:....................:...........:....:...:........:..:..............:..:...........:.....x..x.:--.:...::.:.. 29M4I9M5I8M4I118M2I11M 140/175 80.0% 190/94230402 0.0% 15/175 8.6% 109813795 80400760 +9557 chr4 + 190214555 140686273 140686272 140686506 234 TCTTATTTTTACAACATTTCTGTAAATTTGAAATTATTTCCAATTAAAATGTTTTTCTTTTATCCCACTACCTGTATTTTTCCTCTCACAAATGTGGTGATATCATTCTCATTTTCAAAGATGGAGAGTGTCTGCAAGAGATTTTGCTCAAGCCATTCCCAGTGTTCAGTGATTTCTTTCCTGGAACCACCTGTACAAATGAAAATAATAATTCATGTCAGATTTCATGCCAAA chr4 + 94230402 30867514 30867513 30867732 30867514 30867513 30867732 219 TCTTCCTTTCACAGT-------CATATCTGACATCAACAACATTTACAATAATATACTT------AACCACCTGTATTTTTCCTCTGACAAACGTATTTATGTCATTCTCATTTTCAAAGATTGATAGAGTTTGCAACAAATTCTGTTCAAGCCATTCCCAGTGTTCAGTGATTTCCTTCCTTGAGCAACCTGCatatataaaa--aataattttaaaaaaatttaatCACAAA ....x:...:...::-------:.x..:...x..:.x:xx..x...x...:x.x.x...------x..:.................x.....:..:x.x..:....................x..x..x..:.....x.:...:..:.............................:.....x..:.x.....:.:.x..:...--.......:xx:xx.:....x..xx.... 15M7D37M6D139M2D28M 165/219 75.3% 219/94230402 0.0% 15/219 6.8% 109818759 80395796 +3021 chr4 + 190214555 140689494 140689493 140689551 58 TCCCCCTTTCCTTCCCTTCCCCCTTTTCCCTTCCATTCCCCCTTTTCCCTTCCCTTCT chr4 + 94230402 70641919 70641918 70641969 70641919 70641918 70641969 51 TCTCCCTTTTTTTCCCTTTTCCCTTTTCCCTTTCA-------TTTTCTATTCCCCTCT ..:......::.......::............:..-------.....:x.....:... 35M7D16M 42/51 82.4% 51/94230402 0.0% 7/51 13.7% 70047575 NA +3085 chr4 + 190214555 140689611 140689610 140689668 58 TCCCCTCCTCTCCCTTCCCTCCCCTTCCCTCTCCCCCCCTCTCCCCTTCCCCCCTCCC chr4 + 94230402 86523032 86523031 86523089 86523032 86523031 86523089 58 TTCCCTTTTCTCCCTCTCCATCCCCTCCCTCCCTTTTCTCCTCCCCAACCCCCCTTCC .:....::.......::..x:...:......:.::::.::......xx.......:.. 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% 54166579 NA +3442 chr4 + 190214555 140689620 140689619 140689735 116 CTCCCTTCCCTCCCCTTCCCTCTCCCCCCCTCTCCCCTTCCCCCCTCCCCTTTCTCCTTCCTCCC-----------CTCCCTTCCCTTCCCCTCCCCTTCCTTCCCTTCCCCCTCCCTTCCCTTCCC chr4 + 94230402 909825 909824 909951 909825 909824 909951 127 CCTCCTTCCCTCCTCTCCTCTCTGTGCTGCGCTTCTCTCACATCACTTCCCTGTTCATTCTTCCCAAGACCCCACACCCCCGTGCCTCCCCACCTTCTGCTTTGCCCTATCACTCCCTGCCCTCCTC .::..........:..:.:....x:x.:x.x..:.:..:x.x:.x:::..:.x:..x...:....-----------.:...x.x...:...x:.::..x.:..x..:.x:.x......x....:.:. 65M11I51M 72/116 62.1% 127/94230402 0.0% 11/116 9.5% 139779795 50434760 +3082 chr4 + 190214555 140689706 140689705 140689765 60 TTCCTTCCCTTCCCCCTCCCTTCCCTTCCCTTCCCTTCCTCCCACCCCTTTTTTTTTTTT chr4 + 94230402 56436012 56436011 56436071 56436012 56436011 56436071 60 TTTTTTCCCCCCCCCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTT ..::.....::......:::..::::....::..x::.x:...x................ 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 84253694 NA +3219 chr4 + 190214555 140696328 140696327 140696399 72 GTGCCTGTAATCCCAGCTACTCGGGAGGTTGAGGCAGGAGAATCACTTCAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........:.::...:....x.xx.x...x.....x..........x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 64663122 NA +8067 chr4 + 190214555 140701499 140701498 140701620 122 CTTACCACAGGCGATGGTCCAGTAGACCAGGGAGTCTGGAGTCTGGTACAAGATTCGGTAAGGAGCGACCCGGGCGCTGGAGTCCAACACAACATCAAGGGTACCCACCAGCAGGCCTGAGG chr4 + 94230402 30871834 30871833 30871955 30871834 30871833 30871955 122 CTTACCACAGGCAATAGTCCAATAGACCAAGGAGTCTGGTGCTTGATAGAGGATTCGATATGGTGCCACTCTGGCACTGGAGTCCAACACAACATCAAGAGTACCCACAAGGAGACCTAGGG ............:..:.....:.......:.........x.::..:..x.:......:..x..x..x..:.x...:.......................:........x..x..:...::.. 122M 99/122 81.1% 122/94230402 0.0% 0/122 0.0% 109829665 80384890 +3117 chr4 + 190214555 140704261 140704260 140704343 83 CACAATGGTGTGCACCTGTAATCCCAGCTTCTAGGGAGGCTGAGGCAGGAGAACTGCTTAAACCTGGGAGGCGCAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....--...x....:.:......x..x.::........x.xx.x...x::...:....::.:..x:x::..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 64671064 NA +3080 chr4 + 190214555 140704361 140704360 140704469 109 ACTACACCCCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAACAAACAAACAAACAAACAAAACAAAAAATCAGAAAAAAAAAAAAAAAAGAAAAGGACAAAAAAGAA chr4 + 94230402 7124793 7124792 7124901 7124793 7124792 7124901 109 ATCACATCTCAAAATAAGAACAAAAGCTTCAATTCTTCTTTAAAAAACAAACCAACAGACAAAAAAAATCCCAAGTAACCCAAACAAAAAAGACAAGCACAACAAAGAA .::...:.:..:xx.::.x.xx.:...xxx.x.::x...:x..x........x....:......x...xxx:x..x..xxx...x........x...x....x...... 109M 70/109 64.2% 109/94230402 0.0% 0/109 0.0% 133579568 56634987 +3139 chr4 + 190214555 140709223 140709222 140709262 40 CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 65461174 NA +3353 chr4 + 190214555 140709225 140709224 140709264 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 65461176 NA +3567 chr4 + 190214555 140709227 140709226 140709266 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 65461178 NA +3102 chr4 + 190214555 140709229 140709228 140709264 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 128107925 62106630 +3353 chr4 + 190214555 140709229 140709228 140709268 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 65461180 NA +3139 chr4 + 190214555 140709231 140709230 140709270 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 65461182 NA +3316 chr4 + 190214555 140709231 140709230 140709266 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 128107927 62106628 +3102 chr4 + 190214555 140709233 140709232 140709268 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 128107929 62106626 +3093 chr4 + 190214555 140716918 140716917 140716999 82 CTGTAAAAAAAAAAAAAACACAAACAACAACAACAACAAAAAAAGCAACTCCAGGTTTGGTCTCAACCTATCTCTGCATTTA chr4 + 94230402 66076810 66076809 66076888 66076810 66076809 66076888 79 CTACATGAACAGAAAAAAAACAAACAACAACAACAACAAAAAA---AACCCTACATATCTTTTGTAACTATTTTCATATTTA ..::.x:..x.:......x........................---...:.:.x:.x.xx.:.xx.x....:.::::..... 43M3D36M 56/79 70.9% 79/94230402 0.0% 3/79 3.8% 74640108 NA +3730 chr4 + 190214555 140716923 140716922 140717000 78 AAAAAAAAAAAAACACAAACAACAACAACAACAAAAAAAG--CAACTC----CAGGTTTGGTCTCAACCTATCTCTGCATTTAA chr4 + 94230402 4563811 4563810 4563894 4563811 4563810 4563894 84 AAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAACTCTGTACAGCTTTTGGCTATAACTGCTTTAGCATTAAA .............:.......:.................:--......----...x...x.x..xx.x..:::.:x.....x.. 40M2I6M4I32M 63/78 80.8% 84/94230402 0.0% 6/78 7.7% 136153112 54061443 +3112 chr4 + 190214555 140729690 140729689 140729749 60 TGCGCCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAATCCCGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x......:.........:::.........x.xx.x...x::......:..x.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 64696485 NA +3215 chr4 + 190214555 140733817 140733816 140733949 133 TGTTTCACCTAGATTCAAAAAAACAAATGGGCTGACAACTTACCATTCCAAATAGTTATTGTAAACAACATTTTTCTTTTATTTTCCTCTTCTTCCTTTCCTCCCTCCTTCTCTCCTCCGCTCTTCCTCCCTC chr4 + 94230402 58890454 58890453 58890571 58890454 58890453 58890571 118 TATTTTACT--GATCCAAAAAAACAAATGCA-TGACTGTGTAA-ATTCAGAACTGAAGTCCTGAA-----------GTCTTTTTTTCTCTTCCTCCCTTTCCCCCTCCTCCTCTCCACCACTTTGCTCACCTC .:...:..:--...:..............x:-....x::x..x-....x:..:x.xx:.:x.:..-----------x.:.x....:......:...:..:.:.......:......x..:..:.x.::x.... 9M2D20M1D11M1D21M11D57M 81/118 68.6% 118/94230402 0.0% 15/118 12.7% 81843363 NA +3222 chr4 + 190214555 140737442 140737441 140737481 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACATACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x..........:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 65489393 NA +3436 chr4 + 190214555 140737444 140737443 140737483 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACATACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::............................:....... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 65489395 NA +3222 chr4 + 190214555 140737446 140737445 140737485 40 CTCTCTCTCTCTCTCTCTCTCACACACACATACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x........:......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 65489397 NA +3185 chr4 + 190214555 140737448 140737447 140737483 36 CTCTCTCTCTCTCTCTCTCACACACACATACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:..:....... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 128136144 62078411 +3548 chr4 + 190214555 140744744 140744743 140744825 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTTCAAAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGATAGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:..........x..........x.xx.x...x.:........::.:..x.xx:.::..:.. 6M5D71M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 64711543 NA +3595 chr4 + 190214555 140747212 140747211 140747294 83 CATGGTGGCATGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACTCAGGAGGTGGAGATTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.:.........::........x:xx.x...x.:.......:...:..x.xx:.::..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 64714015 NA +13727 chr4 + 190214555 140755861 140755860 140756410 550 GCGGCGCCGCAGCGCTCCCGGCTCCCCTCCTGC----AGGG---------ATCGGCCACG----GTCCTTACCCGCCAGTCCGCCGCCGCCGCCTCCATCGCCGGCGTGGCCCTTCCTCCGCTGCAGGATGAAGTATGGGTTGGCCCTCTCGGTGATCCACAGCGCGTTGGCCAGCAACACCTCCTCCGGGTTCACCCACATGGTCCTGGC---TGCCGCGGGCGGGCGCACAATGG---GCCCGTGGGTCCAG-----TCCTGCACCCA-CCACCGCGACAGGCGCGCACTCCTGGGCACACGCGCGCCCGCCCGCCCGTCCGCTAGGTGCGGCGGCGGCGGCGGCAGGCGACTTCAGGGGGTGGCCCGCGGCGTCCGGGCCAC--AACAAAGCCCCAGCAGGCGGCCCGGGAGGACGGTGA-GGACGCGGGCGCGGCAAGCAGCATCCTCCCCGCGGC-GTCGCCGCCCCGCGAGAGCCCGCGGCCGCA--GACGCCCGGCCTG----------------GCACTCTGCAGCCCGGCTCCCGGCCCACGGCG------GCGGGAGG----AGCGGGAGGAGGAGGAAGAGGAGGAGGAAGGGAGCGGGA chr4 + 94230402 30883685 30883684 30884267 30883685 30883684 30884267 583 GCAGCGCCGCAGCGGCCGCAGCCCTCGGCCGGCGAACAGGGGCAGCTCCAACCCGCCCCGCAGCGCCCTTACCGGCCAG---GCCCCCGCCGCCTCCATCGCCGCCGTGCCCCTTCCTCCGCTGCAGGATGAAGTAGGGGTTGGCCCGCTCCGTCACCCACAGCGCGTTGGCCAGCAGCACCTCCTCGGGGTTCACCCACATGCTCCCGGCGCGGACAAAgggcggccgccctgccgcccgcctgcggggcgcggggACTCACGCACGCAGCGGCCGCCTCAGACG----CCACCATGCCCGGCCGCGGCCCACGGCACGGCCGGAGGGCGGAGGGGCGGCAGCCGCA----------------TGCCCTCGGCGCTCCAGCCGCCTAcccgcgcggcgccgggcg---cggaggagcggccacgggcggcggcgcccccagcagcaacag--cagcagcagccgcagcGCCGAAAACGCCGGTGACATCAgcggcgcccggcccggccgcgcgcccgcaccgcgtgctggagcgcgcgccccgcacctgcgcgccccgtgcgggaggccgccgcgcgccggggagaggggcggggcggAATGGGGCGGGA ..:...........x:.x.:..:.:.xx..x..----....---------.:.x...x..----.:.......x.....---...x..................x....x..........................x..........x...x..x.:....................:.........x...............x...:...---x:.x:x......x...x.x::x.---...:.:...x.xx.-----..x:....x..-.x:....xx...:..----.:x.::x..x.:xx....x..xx.x..x..x...xx:..:.x:.x......:..x...----------------x....x.....::.x:...:.--.x.x:x..xx.:x.:....---...::.::...:x.-..:..xx.....xx.x.......x.xx--.x..:..-.:...x..x...x:.:x...x.:.:.xx..--.:.........:.----------------..::x...x...x..xx:....xx..xxx...------........----x...x.xx.:....:::.:x.:..x....x..:...... 33M4I4M9I10M4I15M3D129M3I23M3I14M5I11M1I15M4D58M16D21M2I19M3D14M1I27M2D7M1I30M2I13M16I32M6I8M4I39M 373/522 71.5% 583/94230402 0.0% 89/522 17.0% 109872176 80342379 +3048 chr4 + 190214555 140757454 140757453 140757512 59 TCTGGAGGATAGTTCAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTCCTCTTC chr4 + 94230402 9924999 9924998 9925057 9924999 9924998 9925057 59 TCTTGAGCATTCTTTAGACAAATTAAAAAAAAAAAAGAAAGAAAAAAGACTTCCTATTC ...x...x..xx..:..x....xx............:...:......:.x.....x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 130832455 59382100 +3340 chr4 + 190214555 140761461 140761460 140761530 70 CATGGTGGCACATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:.--....:.::..........::........x.xx.x...x.:.......:...:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 64728264 NA +3327 chr4 + 190214555 140779354 140779353 140779420 67 TGTGGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTGGAGCCCAGGAAGTTGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..::..........::........x.xx.x.:.x....x..:.....:.:x..x:.....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 64746143 NA +3027 chr4 + 190214555 140789559 140789558 140789631 73 TGCACCTGTAGTCCCAGCTATGTAGGAGGCTGAGGTGGGAGGATCACCTGAGCCTGGGAAGTTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.......:x.:::........x:xx.x.:.x...:...:..::.:.:x..x:....::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 64756354 NA +3624 chr4 + 190214555 140797153 140797152 140797235 83 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:...........:x........x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 64763956 NA +3118 chr4 + 190214555 140810733 140810732 140810813 81 TTCCCTCTCTCCCTCTCCCCACCTTTCC------CTCTCTCCCTCTCCCCACCTTTCCCTCTCTCCCTCTCTCTCTCTCTCCCTCTC chr4 + 94230402 57703922 57703921 57704008 57703922 57703921 57704008 87 TCCTGTCTCTCTTTTGGACCACTTCTCTGCTGCACAATGTCCCCCTCCCCACCTTTTTCTCGCTCCCTTCCCCTCCATCTTCTTCTC .:.:x......::.:xxx....:.:..:------.xx.x....:............::...x......::.:...:x...:.:.... 28M6I53M 55/81 67.9% 87/94230402 0.0% 6/81 7.4% 83106811 NA +3032 chr4 + 190214555 140810785 140810784 140810883 99 CTCTCTCCCTCTCTCTCTCTCTCCCTCTCCCTCTGTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCTCTCTCTCCCTCTCTCTCTCTCCCTCTCCCTC chr4 + 94230402 18131233 18131232 18131329 18131233 18131232 18131329 97 CTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCA--CTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTATC ....:x.:.x:.:.:..x:...:.:::...:x.:x:...xxx.....:..:...:.:...--.......:.:xx.....x.::::....::....:x.. 60M2D37M 59/97 60.8% 97/94230402 0.0% 2/97 2.1% 122679552 67535003 +3453 chr4 + 190214555 140810969 140810968 140811065 97 CTCCCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCCCTCTCTCTCCCTCTCCCTCTCTCTCTCTC chr4 + 94230402 18131233 18131232 18131329 18131233 18131232 18131329 97 CTCTTGCTCGTTTTTTCATTCTTCTCTTCCTGCCTCCTCGAACTCCCCCTTTCTTCTTCACTCCCTCCCCAGCCCTCACCTCTTCTCTTTCTCTATC ...::x...x:.:.:..x:...:::.:..::x.::....xxx.....:..:...:.:......:.:...:xx.:...x.:::::....:.....x.. 97M 58/97 59.8% 97/94230402 0.0% 0/97 0.0% 122679736 67534819 +3376 chr4 + 190214555 140811030 140811029 140811161 132 TCTCCCCCTCTCT-----CTCCCTCTCCCTCTCTCTCTCTCTC-TCTCCCTCTCTCTCCCTCACTCTCCCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTCCCTCTCTCCTTCCCTCCTTCCCTCCC chr4 + 94230402 92917601 92917600 92917737 92917601 92917600 92917737 137 TCTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCC-CTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCC ...:.::....x.-----.x..x..:....:...x:..:.:..-....x..::...:...:.-...:..:.:.....xxx.x...::::.:.::x..xxx.:.x.:....:x:..x.:::..x:..x.:......... 13M5I25M1I18M1D75M 82/131 62.6% 137/94230402 0.0% 7/131 5.3% 47893429 NA +3330 chr4 + 190214555 140811081 140811080 140811185 105 CCCTCACTCTCCCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTCCCTCTCTCCTTCCCTCCTT-CCCTCCCATTCAATAGAATGTGGATGAGGCA chr4 + 94230402 739203 739202 739308 739203 739202 739308 106 CCCTTATATTTCCCCTCCTGCTGCCTCTCTCACACTGTACCTCGGCAGCTCTCTCTCCATCTGCTTCCCTCCCTGCCCCCTCCCTCTGTGCCAGGTGGGGAAAGCA ....:.:x:.:......::x..x........x.x..x.x:...xx.xx.......:.:x...x.........:.-...:.:.x:..x:.:xx.x....:x:.:... 74M1I31M 68/105 64.8% 106/94230402 0.0% 1/105 1.0% 140071878 50142677 +3004 chr4 + 190214555 140814624 140814623 140814696 73 CAGCCATCCTTTTTCAATTTCTTTTTCTTTTTCTTTTGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 84739508 84739507 84739580 84739508 84739507 84739580 73 CAGCAATCTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTTGA ....x...:...x....x..:.:.....:.::..x:.xx::x::::.:.:......x.x.............. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 56075116 NA +3051 chr4 + 190214555 140820294 140820293 140820344 51 TCAGTTCAGCAATGTATTAGAACTTTTTTTTTTTTTTTTTTTTTTTACTGT chr4 + 94230402 79153054 79153053 79153104 79153054 79153053 79153104 51 TCTGTCAAGTAACTTATGAGAACTTTTTTTTTTTTTTTCCTTTTTTACAGT ..x..:x..:..:x...x....................::........x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 61667240 NA +3455 chr4 + 190214555 140837352 140837351 140837476 125 TTGCAAGATTGGGTGTCTGGTAGGCAGGCACACCCGGGGCAGTTACAGCAG-ATAATTTATCTCCCAGCACACAAG---------TCCCTCCCCAAGTTCCTCATTGGTGGAGTACTATGGGGTTATAATCTTCC chr4 + 94230402 13421524 13421523 13421658 13421524 13421523 13421658 135 TTGCAGTAGCGGGCGTCCTGCAAGCAGGAGCACATGCAGAAAACAGTGTTGCATCTTTTATGCCCTATTACCCAGTGCTTTTCTCTTCCTCCCCTGGTTCCTCATTGGCTGAGTACTTCAGGTTCACAATCTTCC .....:x.x:...:...:x.:.:.....x:...x:.x:.x.:x:.xx.:x.-..xx.....x:..:.x:..x..:x---------.:.......x:............:x.......x::..x.:.:........ 51M1I24M9I50M 81/125 64.8% 135/94230402 0.0% 10/125 8.0% 127415828 62798727 +5609 chr4 + 190214555 140856576 140856575 140856833 258 AGAGTGATGCAATTTTATTCTCAGGTCTAACTCTATTGTGTTCTAACATTCTCTAATTCACTTCTCTGCTCTCACATGTATTTATAGACATGGATACCATTGCCAA-AGCTCTGAATTATGTT-TTTCTCCTTAGAGATTTGAGACCCTTGGCTCCCATTAGATCTATAATATCAATGACAGC---TGTGTTGTGTGTGTATACAGCTCTCATAGCAACCAAGTGCAGTTGCCCGCCAATGAAACCTGGCTCTGCTTTCCCCC chr4 + 94230402 30903238 30903237 30903484 30903238 30903237 30903484 247 AGAGTGATGTAA-------CCCAAGCCCTACG----TATGTGCTTGCAGCCTGGAATTAATTGCCTTACGCCCCTGGTTATTTATAGCC-TTGATGCCATTCCCAGCAGCTCGGCACTGGGTTACTGCTGCTGCGACACCCGAGCGCGCCACCGCCCACGAGATCTgcagcagcagcagcagcagcTGTGTTGTGTGTG----CAGATCACATAGCAACTGTGCACTGCTGTCTGCCGGGGGAAACCGGCCCTGCTCTCTCCC .........:..-------.:..:.:.:x..x----.:...x..x:..x:..xx....x.:.x.::.:.x.:.x::xx.........x.-.x...:.....x...:-.....x.x.:.:x...-:.x..x..xx..x.:::...xx.x:::x.x....:x......::.::.x..::::....---.............----...x..x.........::x.::.x.:..:.:...::x.:..x.:...:.....:..:... 12M7D13M4D53M1D16M1I16M1I59M3I13M4D60M 156/242 64.5% 247/94230402 0.0% 21/242 8.7% 109953338 80261217 +13909 chr4 + 190214555 140859795 140859794 140861269 1475 CAGACACAAGCATCTGGTTCCATTTTATTAAAAAACAAAACCAAAAGAAATTTTGCAGTGAAATTTCCTGGAATTCACAACCCTCATTTAAAAATCCTTATAGTTGCAATATTTTTTTTTTAGCCAGTACGTAAGAACACGATTGCACTTATTTACATGATAGTCTTCTATATAACAAAAATAACCATGTTGTAATG------ACTGTTTCCAACTATCACCC---TTGTTTCATCACTAGCCCATTATGAGACAAGTTGATTACGCTCTCCAAGTACAAAGAGAATAGAATAAAGCAAAAT-----------AAAAGTCTGTGTCTCCTAATAGAAGACAAATTCCTTTAAAGACAGTTACTTTTTTTTTTTTTTCAATTTCTTTGTATTTCAAGAGGGATATAAAGTGCTCTGAAAGGAGTAGGGTAGGTGCCTGAGGTGGGGAAGAAGGAAAGAAATTTATACAGAAAAAATTTAAAAAACTACACTGCCTTAACTAATCATCTCAATATGCACACAACTTTGTACAGAAGATTAGTTTTGGGTAAAAACGCTAC--ATAATTCACTAGTACTTATTTCGGC-----------AATTAAGAACTGAAGTCCAAATGAAAGACTCCCCATGCAAATGTCATCAGGAGTGACTTTTTTGTGATTTTGGGTCAGATGCTATATAAATCAAGGAAGCTCAGTCACACAGTCTGAATATGGAGAGGATAGACAATGCCGAGATGGA-ACCATCATCTACTACC--------TGCAG-ACTAG--CCAGAAAGAC--CTTGTGGGGAAGCTAAGTAGACTTTACCCCAACATCAATCATTTTACAACAAAAGCATTTTGTTGCAAGCATTTGTTTACAATAAAAGTAATTTGTGTTAGGATGGAAAAAAAGCCATTG----------GAATTTCCTC-------TTGCTAGTAGGGAGGAAGATTGA---------------TTTATGATGT------CATGTCTGATTATTTATAATTGTAAATTCATTATTT--GCAGATTTTTTTCTAGTGGGAAA------TAATATGCTGTACA-------AAGTGGTTAAAATAAGTTATTTCTTTTTCACAT----TTTTGCAACTGGCAATTGCTGGTTATTGTCTGCAGTCTACAAAA----------CTGAGTATCACATATGTACTGCTTGAGAGTTTCCCCTGGAAACCAGAATAATCATCCTCCCAGCTCATGAAC---------------------------ATTT----------TAAAGAAC----AATACCCATTTTTTTTTCCAGAAAATGGATGGAATGTAACTTTTCACAAATACAAAATTATTTCA----TTTTCTAAATGTAAGGGACACCCCTCTATAAAAATAACAGTCCCTCCCCAC-----TCCCACCCCTACATCTCCTTCTAATTATAAAATGGTAGAACCATCTCAGATTACTAATGTGAAAGCAGGAAGTAAATA---TATTATGTACATGTACAAAACACATCAGTATTTCACA-CCATTTACATTCATATGAAGTCTTTTTATTGATCTTCC-------TTTGCAATTTCACAAGAATAAAG--TTGAG--ATAACTTACAAA--AACAAGCAGTCCCTTGCTTATA chr4 + 94230402 30904165 30904164 30905654 30904165 30904164 30905654 1490 CGGGCACGGTCATCGGATTC-GTTTTATTAAAAAAC----------------TTGCCATAAAATTCCTCGAAATTCACAATCTTAACTT--------TGATAGTTGCAATATTTT-------ACTAGTACATAATAACACAGTCTCACATATTTACATTATAATCTTCTATATAACAAAAATAGCCGTGTTGTACTACTGAATAACGCTTCCAAATGTTAGCCTTATTGTTTCAGTACTCCCCCCAGCTGAGTCA--CTGTCCATGCTCTTT-AGCATTTACAGTATATAACAAAGCAAGATGAAGAGAAAAAAGAAGCGTGTGCCTCACGATTGCAGGCAAATCCCTTT-AGGATGG------------TGCTTCCGACTCCCACATTTTTTTCAAGAGAGATAAAGTGCATTGGAAGGA---------------AAGGTGG---ACACGTCATTAAATGT---CAGCAAAGAGTTAA--------GCTGTGTTTGCAGTGCGGTACAGAAAGTAAAC----CTAGACAAAAGGCTCGCTTC--ACAAACATGCTACTGCTGTTTTGGCAGCACGTTCACGGGTAGGAGGACAAAAAGGAAAAGCTGATGGTAAGAAAAAGAGCTGCCTGTGCAAATGCCAC--AGTGTGATTCTGCCATGGCCTTTCACTAGGTGCTTCCCAACCC----AAGTGCAGCCAC-----TTGAA---GGAAGGAACTACTAACGTGGAGCTGAAGGCTCACGCCCACGGCCAAAACCAATGCAACGCCAGTACCAGCAAAACAGCTTCGGCCAAAACCACGT---CCCGATCCTGACG-----------GCCCCGCAGATGATGAGATGCAG-------------------------TGTGTGAGTGTG------ACGCCCTCGCCCCGTTTCCCAGGTTTCTCAGGCTGTCTGCTGGTGCAGGGAGAGGCAGGGCTCGAGCACACCCTCTCCCGGTGCCCACTGCAGGTCCGACCGCCTCTGA---GAACTTCACTGATCCAGAAAGTTGTTTCCCAATTGGAAATTCCTTTGGCAAGCTGTGCACTGATGCATATGGT---ATTTATTCATCTTTTTTTCCCCTCCCCTTTTAACATTGGCATTTGCTGGTGTGGCTCTGCAGCACGCGAGAGGAGACGTTGCTGGAAAACACACTGGGACCA-----------TCACTCGAAACCAGAACG--CTTCTGCTCTGTTCATGAACTGCATCCAAATAGGACACCACGTTTTGATTTGGTTTGCTTATAAACTACCCTAAATAAAAATAATTCTCTCCTGGAAACGGATGGAATGTGTACGTTGACAAGTACAAAACCATTTGAAGTGTTCACTAAATGCAAGGAACATCTTGCTATAAAAATAACAGACCCTCCCACCCGCTGTCCCCTCTTTACAT----TTCTAATTACAAAACGGCACAGTAATTTCAGCTTCCTAACATG-GAGCAAGAAGGAAGGACGGCATTATGGACACATACAAAACGTTTCGATCTGGCGTAGCTGTGTACATTCGGAGCAACCAAGCATCTTGATCTCGCTGTTGTTTTTAACACTACACAGGGCTGAAGAATTGGGAAACAAACTAAAAAGGAAAATGCTGTTTCTTCCTTATA .:.:...::x....x.:...-:..............----------------....x:.:.....:.::.:.........:.:.x.:..--------.x................-------:.:.....:...x.....::.:x...x.........x...:....................:..:.......x.:------.x:.:......x.:.:.x..---........x:...xx...xxxx....x..--:..x::.:.....::-..:.:xx.x..x...x..:.......:..-----------.:...:x....:...x::..x.x..:.....:.....-.:..::.------------.x:..:.:.:.:.:x::.x...:xx:..:..x.........x:..:.....---------------:......---.x.x.xx.xx....x.---...x...:.x....--------:...:x..x:.x:xx.:x:x..:x.x.:.x..----:.:x...:...::.x.:..:--::...x.:.....--x.:x..::x:..:..x.x:x:x..:-----------..xx..:.:....x.x:x.:.x:..:::..x..::........:..:--:.x....:.:.x:::..:::..xx:::..:....x:x:..x:.----...:x...:...-----:....---...::.:.:x:x:..:.:x...x..:.-:.:xx.::.:..x:..--------....:-:.:..--....x..:..--...xx.xx:..:.:.x..---.::x.:..::..:-----------:.xx.:x.::::x.xx.x....:-------------------------.....x..x:..------.x...x.:.----------x.:x..:...-------:....:..:x:.:.::..::x.:---------------:.:x:.:..:------..x...:..:::::.x.:.---x..x....:.:x.:--.x.::..x...:.:.:.x.....------.:::.x.....:..-------.x:....---.x.x.x.:..:.:......x.x.----....:xx.:.....x........xxxxx.......:x::.:.:.----------...::x.x....:xx.x..::-----------:.x..x..........::--.x..:x.:.x.:........---------------------------....----------....xx..----....xxx..xx..:.:...x.:...:...........:xx:x..x....:.......::....x.----..:x.......:....:...:.::x...............x.......xx.-----....x:.::.....----.........:....:..:.x.::x..:....x..x....::..-:....:....x..:x.---:......x...::........::x..::.x.xx.::.-.::.x.......:x.xx..x:xxx:x.x.......:x.-------...:xx.:.x....:.:x.:...--...:.--.:..x:..x...--..x.x..x..::...x...... 20M1D15M16D37M8D18M7D75M6I20M3I29M2D15M1D29M11I37M1D7M12D51M15D7M3D16M3D14M8D32M4D20M2D13M2I25M11I47M2D43M4D12M5D5M3D27M1I16M8I5M1I5M2I10M2I18M3D13M11D23M25D12M6D9M10I10M7I23M15I10M6I19M3D14M2I23M6I14M7I7M3D23M4I44M10I21M11D18M2D20M27I4M10I8M4I65M4I51M5I14M4D43M1D16M3I37M1I38M7I23M2I5M2I12M2I22M 841/1309 64.2% 1490/94230402 0.0% 347/1309 26.5% 109955630 80258925 +3210 chr4 + 190214555 140864093 140864092 140864147 55 GAAGGAAATGTTAAAAACAAGAAAACAAAACAAAACAAAACAAAATGAACATTTT chr4 + 94230402 9405900 9405899 9405954 9405900 9405899 9405954 55 GAAGGAAATGTTAAAAACAAACAAGCAAACAAAAATAAAACAGTATTTATATTTT ....................:x..:....xx....:......:x..xx.:..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 131458193 58756362 +17162 chr4 + 190214555 140867657 140867656 140868397 741 CTTAATGAAAGCTGGCCTTAGTCCATTT---CAGGGTGCTGAGGCACTTCTC----AAAGCCATGCACACTTCATGCTGGGAGGTCAAG--ACCACATATCTCAGAGATGGAATACAAACTGATCATAGCA---GGAACTGGTGCTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGAATAGATGGAAAGTAAACTACAAATAATCTTTAAAAAAATTGCCAAAGAAATCAAACAACATGCC-----AAAAACAAGAATGATGAGACATGGAAAGAATTGAAATGAAACTAAGAAATCCTAAAGGTGGCCTTTCAGTCTCTGTTTTAGGAGCTTCTGAAG-------TGTATGTCTACATGGACATAGG---AGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCACAGACTGCCATACCGATGGAGAAACTGCATCCTGATTGACAAGACTTTGGATATTGCTTTTCGTCAGCATTCTTGAACGGAGCGCCCTGGAGTTGCCAAGGTGATCTGGAGGTGTGTGTGTGCCTGGTCCAAGTCTTGGAGCACTCTTCCCTTCCTTTCCCTTGGGTC-CTACTATCTCTTTGCTTCTG-GATTTGTCG---TTTCAAGATTTCACTTCTTCACAGTCCTGGTCAGTGGAAAGTTCTACATCAGACAGTCCAACCTCCATTGCCATGATCAAGGAAATGTCAGAATCACTGCTTACAGCTGGCTCCTGCTCACCTGGGA----GGAGAAAGCAAA chr4 + 94230402 30910926 30910925 30911667 30910926 30910925 30911667 742 CTTAATGCAAACAGCTTTCA---CATTTACACAGGATGCTGGTGCACCATCCCTCTGAAGCCACATGTACTTCATGAAGAAATAGCAGGCAATGATAGATCCTGGAGTGGGATCGTTATGTGACCAGTGAACGGGGAATTCAGGTTTCTGGATTGAACTCT-TGAAAAAGCTGGGGGTCAGTCAACAAAAA---------------GAATGTCTACTCATAACAAACTATAAACATACAAACATACATAACAAACA---TACCTCTTTAAAAAAAAAAAAAAAGAAACAAAAACGCGATCGAA-CAAGTGTAGAAAACACTCAAGCTGTCATTTCAGTTGCGTATTTATGAGCCACTGAAGAGTTACATGGCTGCTCACAAGCACGTGGGCAAACTGGAA----GCATTCATCTCCCA---TGTGAACATTACGAATG--TATGTAGATGATGAAACTGCATCCAGGCAGACACAACTGTTGCTATTGCTTTTCGTGACCATCTCAGAATGGAGTGTGCAGGAGTGAC---AGTGCTCTGGAGGCAAGTGCGTGACTGGTCCAAATCCTAGCAGGTTGACTCGGTCCCTCCCTGTGGCCCTCCCCTGTAGTTTAGTCTCGGAGATCTGTTTGTTTTTCAAGACTTCACCTCTTCGCAGTCTTGGTCAGTGGAAAGCTCCACATCGGACAGTCCAACCTCCATTGCCATAATCAATGAAATATCTGAATCGCTGCTGACTGCTGGCTCCTGTTCATCTGTGAGAGTGGAAAAGACAGA .......x..:.x.x::.:.---.....---....:.....:x....:x::.----:......:::::........xx.::.x:x..:.--.:x.:.x...:::...xx...x:::x.xx...:..xx.x.---....:.x:x.:....::.:x...x:..-.:x.........:.xx..x:x..x:....---------------...x..xx...xxx..:..x..x....x.x.:x:x..x.x.x.x......---.:..-----.....x..:..x:.x..:...x::.x:x:..:...-::.:xx..::...:x..x...x..x.x.......:x.xxx....x....:x......-------..xx..:::...x.x..:.:..---.x.....----..x....x..:..x---..:x..x:::..::.:x--:..::x....:x............x.::x....x:...x.x.x.............x.x...:::x...:....:.:x.x.....x:.---:...x........::x...:...x.........:..:.:.x:x::.xx::.xx...:.:..:x...x:.-.:x..:.xx:..x.::..x.-...:...:x---........:.....:.....:.....:..............:..:.....:.......................:.....x.....:..x.....:.....x..x...........:...:...x..----...:..::..:. 20M3D5M3I21M4I33M2I40M3I27M1D29M15D50M3D4M5I35M1D57M7I22M3I7M4D14M3D17M2D88M3D69M1I20M1I9M3I127M4I12M 469/706 66.4% 742/94230402 0.0% 71/706 10.1% 109956731 80257824 +3658 chr4 + 190214555 140870859 140870858 140871058 200 AAAAAAAAATCCCTTCACTGTGGT---------TTTTGTGGAATTTCAGGAGAGACTGGGAGTGGCT-------------TCATATGGCAGGTCCACTCT---------TTTTACTCAGTGCTCTCCTTAAACA-TCATTT-----------TTACAAT--AAGAATTCTC-------TCTCTCTCTCTCTCTCTCTATATATATATATATGTATACACACACACACACACACTT---TATACTTATGAGAACTG chr4 + 94230402 60831353 60831352 60831606 60831353 60831352 60831606 254 aggaagacatccttcctcagtggcagtcagcccttaaatgggatct-aggagagatggagcctggctccaccccttctggtcacacagctgaattgccttcacctgtgctcctgctcagtgctttcctcaggtggtcaatcagaggttcaggctatgattcaacagttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTG .::..:.x....:.:.x.x....:---------..xx:...:..:.-........:x.:.xx.....-------------...:.::..x.:x:::.::.---------.::.:.........:....:.::::-...x.:-----------:..::..--..x.:...:.-------...x.....x.........x.x.:.:.........:..:........:.....x::.---..:.:....:x.:x... 24M9I13M1D20M13I20M9I25M1I6M11I7M2I10M7I57M3I17M 134/199 67.3% 254/94230402 0.0% 56/199 28.1% 80039506 NA +3110 chr4 + 190214555 140870981 140870980 140871045 65 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATACACACACACACACACAC-TTTATA chr4 + 94230402 60831534 60831533 60831599 60831534 60831533 60831599 66 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATA .....x.............x.x.......:.:....:::.:..:.....x:x:.x.:..-...... 59M1I6M 49/65 75.4% 66/94230402 0.0% 1/65 1.5% 80039447 NA +3683 chr4 + 190214555 140870981 140870980 140871033 53 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATACACACACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............:.:.......:.:.:..:......:..... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 80039451 NA +3290 chr4 + 190214555 140870983 140870982 140871031 49 TCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATACACACACAC chr4 + 94230402 60831534 60831533 60831582 60831534 60831533 60831582 49 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC .....x.............x.:.......:.:...::.:....:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 80039449 NA +3853 chr4 + 190214555 140870983 140870982 140871035 53 TCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATACACACACACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x...........x.:.:.......:.............:..... 53M 46/53 86.8% 53/94230402 0.0% 0/53 0.0% 80039453 NA +3036 chr4 + 190214555 140896690 140896689 140896762 73 AAAAAAAAAAACAAAAAAACAAACAAACAAACAAAAAAAAATAATTTTTTTTCTTTAAAAAAGAAAGGAAGCA chr4 + 94230402 68134267 68134266 68134339 68134267 68134266 68134339 73 AAAAAAAACAACAACAACAAAAACAAACAAACAAGAAACCCCAAACTGCTTTTATTAAAGACAAAACGCGGCA ........x.....x..x.x..............:...xxx:..x:.x:...:x.....:.x:...x.x:... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 72762423 NA +3134 chr4 + 190214555 140896691 140896690 140896742 52 AAAAAAAAAACAAAAAAACAAACAAACAAACAAAAAAAAATAATTTTTTTTC chr4 + 94230402 12722334 12722333 12722385 12722334 12722333 12722385 52 AAGAACTAAAGATAAAAACAAACAAACAAACAAAAAAAGATATCTTTTTATC ..:..xx...x.x.........................:...x:.....x.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 128174357 62040198 +3486 chr4 + 190214555 140899921 140899920 140899996 76 CCTAGTAGGTTCTCTCTCTC--------ACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578236 26578235 26578319 26578236 26578235 26578319 84 CTCAGTAGGGCTTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .::......x::.:x....:--------.x.....................:.:.:.:.:.:x..:...:...x...::..... 20M8I56M 55/76 72.4% 84/94230402 0.0% 8/76 10.5% 114321685 75892870 +3256 chr4 + 190214555 140899945 140899944 140900015 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCATTTGCT chr4 + 94230402 26578266 26578265 26578333 26578266 26578265 26578333 68 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG---GAATTCCCTCTGCT .:...................:.:.:.:.:.xx..:...:...x...::.....---.x:.:..x.:.... 54M3D14M 50/68 73.5% 68/94230402 0.0% 3/68 4.4% 114321679 75892876 +3029 chr4 + 190214555 140899947 140899946 140899999 53 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 26578266 26578265 26578318 26578266 26578265 26578318 53 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGT .:...................:.:.:.:.x.xx..:...:...x...::.... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 114321681 75892874 +11697 chr4 + 190214555 140911136 140911135 140911373 238 GAACTCACTGTTAGTAGTAAAGATGACGTCTCCCTCCTGGGGGATGGGGTCTGTATCCTGGACCACCTGCAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAAGTGACTGAACTTTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTGGTTGGTGGGTGGACCTCCCAGAGAGCCCTCGAAGTCAGTGGGCAAGTCGTCCATGCAGTCGGCATTGGGCTGATGGGGCAGAAAAAGA chr4 + 94230402 30934677 30934676 30934914 30934677 30934676 30934914 238 GAACTTACTGCTTGTTGTGAAGTTACCCTCCCCAGCCTGGGGAAAGGAGTCTACGTCTTGGATTACTTGTAGTACTCCCACAGTCCGCACCGGGGGATCCAGGGCTACAGAGCTCTCGTTCACTGTTATATCGCTGGCTCCTGTTATCTGGTTGGTTGGCGGTCCTCCTATGGAGGCTTCCAGGTCTGGAGGTATATCGTCCATACAGTCTGCGTTGGGCTAACGGGAAGGGAAAGAA .....:....:.x..x..:...x.:x.x..:..xx.......:.x..:....:::..:....::..:..:.:x:.............x..x.x:..:....::.:x..x..:..:..:.........:.:........x.....x...........x..:..x.....:.x:...x.:..x.:...x.x:..:.x:........:.....x..:.......:.:...:x:.:...::. 238M 168/238 70.6% 238/94230402 0.0% 0/238 0.0% 109976459 80238096 +3243 chr4 + 190214555 140913130 140913129 140913203 74 GCGCACCTGTAGTCCCAGCTACTGGGGAGACTGAGGCAGGGGAATCGCTTGAACCTGGTAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........x.::..:.....x.xx.x...x.:........::.x..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 64879926 NA +9902 chr4 + 190214555 140925962 140925961 140926088 127 CTGTGCTGTGCTTACCGGGATCCCTAGGGCTTTAAGAATGTTCATCTTGCACATGGGACAGGTACGATGGTCTAGAAGCCAGGGGTCAACACAGGACTTGTGGAAAAGATGCCTGCAATGAGAACCA chr4 + 94230402 30941841 30941840 30941967 30941841 30941840 30941967 127 CTGTGATATGCTTACCGGGATCCCTAGAGCTTTTAAAATATTCATTTTACACATAGGGCAGGTACGATGGTCTAGCAGCCAAGGGTCTACACAGGACTTGTGGAAAAGATGCCTGCAATGAGAAACA .....x.:...................:.....x.:...:.....:..:.....:..:.................x.....:.....x....................................x.. 127M 113/127 89.0% 127/94230402 0.0% 0/127 0.0% 109984121 80230434 +3552 chr4 + 190214555 140934984 140934983 140935070 87 TGTTATAATATATATATATATATAAATATATATATA-----TTATATATTTATAATATATATATATAAATATATATATTATATATATATAAT chr4 + 94230402 90424135 90424134 90424226 90424135 90424134 90424226 92 TGGTCTAACATATAGACATGCATACACACTCACGCAATTCTCTATATATTTCCATAATGTATGTACAAATGTATATCTTATATATATATAAT ..x.x...:.....x.:..::...x.:.:x:.:::.-----:.........x:.xx..:...:..:....:.....x............... 36M5I51M 62/87 71.3% 92/94230402 0.0% 5/87 5.7% 50510849 NA +6412 chr4 + 190214555 140947648 140947647 140947753 106 ACTCACCGGCAGGGCAGGATCCGGACAACGTCATTGGGCTTGTACCCTTCAATACAAACTGCACAGTTGTCAAAATCAGACTCTGTTTCCTGCAACAGAGGAAGCA chr4 + 94230402 30949242 30949241 30949347 30949242 30949241 30949347 106 ACTTACCTGCAAGGTAAAATTCTGACAACATCATTGGGTTTGTAGCCTTCAATACAAACAGCACAGTTATCAAAGTCTGGCTCAGTTTCCTACAGGAAAGAGAACA ...:...x...:..:.::..:.x......:........:.....x..............x........:.....:..x.:...x.......:..:x.:..::.:.. 106M 82/106 77.4% 106/94230402 0.0% 0/106 0.0% 109998406 80216149 +3356 chr4 + 190214555 140951514 140951513 140951600 87 AATCTTAAGCCAAGAGTGGTTTTTTGTTGTTGTTGTTGTTT-TTTTTTTTTTTTGCAAGGAAAACAACCTGAGAAATTTAGCCAGTTA chr4 + 94230402 29531656 29531655 29531741 29531656 29531655 29531741 86 AATCTTTCACTACAAGAGGTTTTTTGTTGTTGTTGTTGTTTGGGGTTTTTTTTTGAGAAAAAAGAAATCCAAG--TTTTAGATAGTTA ......xx:.:.x:..x........................-xxx..........x:.::...:x..:.::..--x.....x:..... 41M1I31M2D13M 63/85 74.1% 86/94230402 0.0% 3/85 3.5% 111419858 78794697 +3023 chr4 + 190214555 140951531 140951530 140951565 35 GGTTTTTTGTTGTTGTTGTTGTTTTTTTTTTTTTT chr4 + 94230402 18999251 18999250 18999285 18999251 18999250 18999285 35 GGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTT ....................x.............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 121952280 68262275 +17429 chr4 + 190214555 140967617 140967616 140967897 281 ACTCACCTGGTTCCTATCCCTGGCATTTGCATATCGAAACCTCTGGATGTAATAAAAGACGAGCCATGCGAGGGAAATGATCATCAGGACAATGAAGGAGATGGAGACAAACACAACCGAAGTGCGGCTCACATATTTCTGCAAGTTCCGGGTTCCGATGGTGATGTACATTGTCACGGTGATGTTTCTTTCCAGCAGGCTTACTATCTCCTTCCCTTTTGGCTCAGGAATCATTATGGCCACGATGTCTTCTACACCTGTGGTAAGAGGGGAAGGAAGGG chr4 + 94230402 30957186 30957185 30957465 30957186 30957185 30957465 280 ACCCACCTGATTCCTGTCCCTGGCATTTGCGTAGCGGAATCGCTGGATGTAATAGAAGACCAGCCATGCCAGAGAGATGATCATCAGCACAATGAAGGAGATGGAGACAAACACCACGGAGGTCCGGCTGACGTACTTCTGCAGGTTGCGCGTCCCAATTGTTATATACATCATCACAGTGATGTTCCTCTCCAGGAGGCTCACTATCTCTTTTCCTTTGGGTTCAGGAATCATTATTGCTACAACATCATCTAGGCCTGTCA-GAGAGGAGAGAGAAAAG ..:......:.....:..............:..x..:..:.x............:.....x........x..:..:...........x..........................x..x..:..x.....x..:..:.......:...x..x..:..:..x..x..:.....::....:........:..:.....x.....:........:..:.....x..:..............x..:..:.::..x....x:.....x:-:.....:..::...::. 263M1D17M 224/280 80.0% 280/94230402 0.0% 1/280 0.4% 110010431 80204124 +3260 chr4 + 190214555 140973746 140973745 140973819 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 64940542 NA +4437 chr4 + 190214555 140999895 140999894 141000099 205 GCCACTGCACTCCAGCCTGGGTAACAG---AGTGAGACTTGGTCTCAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAG--AAGAAGAAGAAGAAGAAGAAGAAG-----AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGA chr4 + 94230402 84536528 84536527 84536725 84536528 84536527 84536725 198 GCCACTGA----CAGTATGAGTGCCAGCTGAATGAGGCCTTGTC-------------AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAA .......x----...:x..:..:x...---.:....:.:.x...-------------...:::...:::.....:..:.x:.x:....x.:...:x........:.:.:.:.:.:...:.......--.x.x..x.:..xx..x..xx....-----....::....x:..x.::.:.:.xx:.:..:.::...xx.......x:..:.xx..:. 8M4D15M3I14M13D69M2I24M5I58M 122/188 64.9% 198/94230402 0.0% 27/188 14.4% 56463367 NA +3960 chr4 + 190214555 140999932 140999931 141000132 201 GGTCTCAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA--------AGAAGGAGAAGAAGAAGAAGAAGAA-----GAGGAGGAAGAAGAAGAAGAAGAAAA chr4 + 94230402 59372539 59372538 59372753 59372539 59372538 59372753 215 GGCCCGAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAA ..:.:x...xx::..::...x.:x:x:..::....x.:x..:.:::..:..x.xx::...x..x...x..x..:.:...:..x..x..x..x..-..:.::.:x..:.::.:.::.:..:..x..x..:.:.:.:..x.:x..x..:.:.:--------.:.....:..x..x..x.:......-----:.:.:.x..:xxx..x....:..... 94M1I56M8I25M5I26M 118/201 58.7% 215/94230402 0.0% 14/201 7.0% 81627393 NA +3061 chr4 + 190214555 140999936 140999935 141000004 69 TCAAAAAAAGAAGA---AGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAA chr4 + 94230402 9535421 9535420 9535492 9535421 9535420 9535492 72 TCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ...:..:.x..:x.---...:..:.:...:.x...:...........x.........::.xx.:.:...:.. 14M3I55M 50/69 72.5% 72/94230402 0.0% 3/69 4.3% 131464515 58750040 +3200 chr4 + 190214555 140999958 140999957 141000032 75 AAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG .:.....:::::.:....x......x...x...x......::.x...x.x...x.x...::.:.....::.:... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 69398932 NA +3252 chr4 + 190214555 140999968 140999967 141000067 100 AGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535393 9535392 9535492 9535393 9535392 9535492 100 AGGAGTGAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ..:..x::.:.:....xx..x...x.x.xx......x..:x.xxx...:..:.:...:.x...:.........:.x:.::..::....xx.:.:...:.. 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 131464575 58749980 +3130 chr4 + 190214555 140999971 140999970 141000070 100 AGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 9535393 9535392 9535492 9535393 9535392 9535492 100 AGGAGTGAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ..:..x:....:...:xx..x..:x:x.xx......x..:x.xxx...:..:.:...:.x...:.........:.x:.::..::....xx.:.:...:.. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 131464578 58749977 +3017 chr4 + 190214555 141000004 141000003 141000098 95 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAG chr4 + 94230402 10269798 10269797 10269892 10269798 10269797 10269892 95 AAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAG .:..:x..x::..........::.x:.....:x.:...:xx.....:.:x.x......x..::::....:x.xx::.....::..:x.:.x.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 130730206 59484349 +3244 chr4 + 190214555 141000044 141000043 141000132 89 GAAGAAGAAG--AAGAAGAAGA--AGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAAGAAGAAGAAAA chr4 + 94230402 9535399 9535398 9535491 9535399 9535398 9535491 93 GAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAA .....:....--..x...x.x.--......x..:x.xxx...:..:.....:.x...:.........:.x:..:..::....xx.:.:..... 10M2I10M2I69M 64/89 71.9% 93/94230402 0.0% 4/89 4.5% 131464645 58749910 +3096 chr4 + 190214555 141005929 141005928 141005998 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 64972732 NA +8120 chr4 + 190214555 141028215 141028214 141028503 289 GGTTGATGGGTTCACATTTGGCATTCATTAAGAAGTAGTGGCTAAAATTAGTCAGAATCCTAGGTGATTAATCTTTGATATGCATGGCCATAAATGGTGTTCAGTCACTTAGCCAGCTTTTTCATATGGATCCTTCTTAAGG-ACTGGAGCATATC----TCATAAACCATTTG-----CTTAGTCATTTAACTAGAGTGCCTACTTTTGCCAACAGCTTGACAGTTTAAAAAAGAATAAAAGCCTGTTCCCTACTGGAAAAATTTGGAATTTTGCCAT--AATCGTTATAGGCAGTGCTC chr4 + 94230402 30982382 30982381 30982679 30982382 30982381 30982679 298 GGTGAACAGGTGCACATTTGGCACTCATTAAGAGTTACTGCCTGCAATTAGCCAAAATCCTTGACCATTAATCCTAGAGAGTCCTTGATACAGAAGATGTTCAGTCATTTGTCCAGATGTTTCTGACACAGCCTTTAAGAGGAACTGCTGTATGTCTGCATCATAAA-TATTTGACTGTCTTAGTCATTCAACAATGGAACTTTATTTAGCCAACAGCTTGTTAATAAAAAGACAACAAACATACAGCTTCTTA--GGGATATTTTGGTTCTTTGCCATACAAAGACTACAGGCAACATTC ...x:.::...x...........:.........:x..x..x..:x......:..:......x.::x.......:.x..x.xx.x.x.x:.:.:.x.:..........:..:x....x.x....xx.::x.x....:xx:...-....xx.:..:..----.......-:.....-----..........:...x.x:.x:.:.xx...x............x:.:.xx...:.x:.xx..x.xx.x.:.:.:..--..:.x.x.....xx:........--..xx::..:.....::::.. 142M1I13M4I7M1D6M5I75M2D23M2I20M 193/286 67.5% 298/94230402 0.0% 15/286 5.2% 110045833 80168722 +3437 chr4 + 190214555 141032020 141032019 141032110 91 ATATATATACACACATATATATATAAACATATATATACACACACACACACATA-----------CACATACATACACACACA-GTGAAATATTCAGCCTTAAA chr4 + 94230402 23247722 23247721 23247824 23247722 23247721 23247824 103 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATAGCCTACCTCCAA ..:.:.:..::....:.:..x...:.......:..:.....:.........:.-----------:....:x...x.:.:.:.-:.......x:.x:...:x.. 53M11I18M1I20M 64/91 70.3% 103/94230402 0.0% 12/91 13.2% 117784298 72430257 +4050 chr4 + 190214555 141062305 141062304 141062403 99 AAAGATAAACATGCATCTTATATATATCTCTCATATATAGGTATGTATATGTATATATATGTATGTGTATATATATGTATGTCTACACACACACACGCA chr4 + 94230402 86965287 86965286 86965385 86965287 86965286 86965385 99 AATAATAAACGTGCGTTTCATATATATATCTCCCTTTTGGGCATGAATGTATATAAATGAGTATGAGCACATAAAAATGTGCATATACACACGTATGTA ..x:......:...:.:.:........x....x:x.x.:..:...x..:.:....x..:x.....x.:.:...x.x:.:..:x..:......::.:.:. 99M 66/99 66.7% 99/94230402 0.0% 0/99 0.0% 54097018 NA +3515 chr4 + 190214555 141062346 141062345 141062405 60 TATGTATATGTATATATATGTAT--GTGTATATATATGTATGTCTACACACACACACGCACA chr4 + 94230402 47135177 47135176 47135238 47135177 47135176 47135238 62 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACA .:........:...:.:...x..--..x...:..:........x.::............... 23M2I37M 49/60 81.7% 62/94230402 0.0% 2/60 3.3% 93927169 NA +3107 chr4 + 190214555 141078783 141078782 141078833 51 CCGTCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATA chr4 + 94230402 23965212 23965211 23965262 23965212 23965211 23965262 51 CTGTATCAGAGGAAAAAAAAAAAAGACTACATATATATATAGATATATTTA .:..x...:.::............:.x..:...........x......x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 117113571 73100984 +3132 chr4 + 190214555 141078789 141078788 141078849 61 CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACA chr4 + 94230402 78347570 78347569 78347630 78347570 78347569 78347630 61 CAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ...x....x...x..:.....x.:xx.:.:.xx..:......................x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 62731219 NA +3313 chr4 + 190214555 141078789 141078788 141078841 53 CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:...............:.:..:...:.....x.:.::.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 139583786 50630769 +3047 chr4 + 190214555 141078791 141078790 141078847 57 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACA chr4 + 94230402 78347574 78347573 78347630 78347574 78347573 78347630 57 AAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ....x...x..:.......:xx.:.:.xx..:.........:............x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 62731217 NA +3244 chr4 + 190214555 141078794 141078793 141078855 62 AAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACATACATA chr4 + 94230402 74671056 74671055 74671117 74671056 74671055 74671117 62 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ..:..x.x.x.....x..xx.:................:.............x.x.x.x... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 66407738 NA +3080 chr4 + 190214555 141078822 141078821 141078890 69 TATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATAC chr4 + 94230402 89823932 89823931 89824000 89823932 89823931 89824000 69 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTAC .......:x...................:x:...xx..:.....::...x.xx.xx.....:.x:x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 51254890 NA +3050 chr4 + 190214555 141078825 141078824 141078895 71 ATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.:...:x....::..x......:......x.x....:.....x::::::.:....::...:..::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 118478627 71735928 +3147 chr4 + 190214555 141086021 141086020 141086142 122 AAGAGTTACACACACACACACACACACACACACACACACACACACACACCCTTCTAGGTGCCAGTGGCAAGC----AGGACAA-ACAGAAAGGGCAA----CCAATTGCCAAGGGGTGGGAGAAGAAACCT chr4 + 94230402 1607782 1607781 1607911 1607782 1607781 1607911 130 AAAGACTGCAGGAACAAACACCCGCACACACACACACACACCTTCCCATCCTTCCTGATGCCAG-AGCAGTCCCATAGGACGGCACAAACAAGTCAAAGTCCCACGCCCCATGGGAGACAAGGAGAAATCT ..::::.:..x:x...x....x.:.................x:x.x..:.....:x.:......-:...:x.----.....::-...:.x.:.x...----...xx:x...x...:x:x:..:.....:.. 64M1D7M4I7M1I13M4I30M 81/121 66.9% 130/94230402 0.0% 10/121 8.3% 139478239 50736316 +3372 chr4 + 190214555 141092204 141092203 141092285 82 CATGGTGGTGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCTGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......-::.x....:.:...........::........x.xx.x...x:.........::.:..x:xx:..:...:. 10M1D71M 56/81 69.1% 81/94230402 0.0% 1/81 1.2% 65059007 NA +7718 chr4 + 190214555 141130374 141130373 141130600 227 ATTTTTGGAAACAGAACAA---TTAGATAATAGACAATTTCC--AATTTTTTTTTTCCTTTAACGTTCAAACTACAGTATTACTA---------------AACTTCCACTCCCACTAT--CTTAATCAAGCATCATTTGTGTGGGAAATCTGCTTAGTGTTTTCTTTAAAAATAAGCAAGCCATTAATTGATCCAATGTGTTGGCAGT-TCTAGAGAACCTTTTTAGACAGGAACAAATGATGCCTCTTA chr4 + 94230402 31023161 31023160 31023408 31023161 31023160 31023408 248 ATTTTTGAAAGCAGAGGCTGCTTTCAATAAGAGATCCCTTGCTTACTTCATTTTCGACTTTAAAAT--AAACAAAAGCTCTACCATTTTAAAAGGTTAGACATTTTTACTCCCACTGTTCCTTAATAAAACACCATTTGTGTGGAAAAACAGCTTAGTGCATGCCTTAAAAACAGGCAAACCATTAATTGATCCAACATGTCGGCAGTCTTTAGAGAAACTTACTGGACATACACAAGCAATACATTTTA .......:..:....:xxx---..x:....x...:xx:..x.--.x..:x....:xx......x:.--....x.x..:x:...:.---------------x.:..::.........:.--......x..:..:...........:...x.x........:x.x.:.......:.:....:................::...:......-.:.......x...x:.:....x:x....:::..:.x.:... 19M3I20M2I22M2D17M15I18M2I88M1I41M 162/225 72.0% 248/94230402 0.0% 25/225 11.1% 110107213 80107342 +29722 chr4 + 190214555 141132311 141132310 141133008 698 GCTGGGCCACTCACCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTTG---GAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTCTGCAGGAACGCGTTCCGGATCTTATCCCTGTACGTGCAGTTGCCCTTGGGGATGAGGGCTATCCAGTTCTTGCCGCGGGTCGGGGCGGCGAACTTGGTGTTGGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGGCCATGACCACCTCCCCGCGGGCGTCCTGCTTGGGCGAGTGCTCTCCGTAGCGCCCGCACTCCGTCTTCTCCGTGTGCAGCTCCGCGCCGCCGCCGCCCGCCGCCCCGGCCCCGGGGTCCGGCGCGGGCTCGGCGTAGGTGATGTTCACGAAGGCGGTGTACCATTCCTCCTTCTCGGCCACGGTAAAGTCCAGGCAGAGCAGATG-----CACGAAACAAAAGGAAAGCAGCCATGTTGAGAGAGCCAGACTGCAGCACGCTTGGATGAGAGACATTGCCATCTTTATCCGCCGGGGCCCCCTC------CCCGCCCCCGCGCCCTCCCTCCGTCCCGT-----------CCCTCCTCCCCAGCCCCGGCCAACCCCGGGCCGCTGCCTCTCCTCCTGCTGCTGCTCACTCCCGGGCCGGAGGGGCCGCGGCCGGGACGC--------GCAG-CCGCCGCGGGGACCGGATTCCGGGCGAG--CGGATG--------GCGCTGGCCCCTTCCCCTCTC chr4 + 94230402 31024619 31024618 31025308 31024619 31024618 31025308 690 GCAGGGCAGCTCACCTGCGTAGGGCATGGTGACGGTCTCGTTGGCGTTGCTGGAGCCCACGTTGTAAATGACGACGGCGGAGGCGTTCTGAGCGGCGGCGTGGCGGATCTTGTCCTTGTAGGTGCAGTTGCCCCGCGGGATGAGGGCCACCCAGCTCTTGCCCGGCGCCGGGGCGTTGAAGCGGGTGCCGGGGTCGCAGGCGTAGCGGTCGGCGGGCGAGGCGGAGAGGGCCACCTGCCCGCGGGCGTCCTGCTTGGGCGACTGGTCGCCGTAGCGCCCGCACTCGCTCTTCTCGCTGCGGAGCTCGGCGCCGCCGCC---------------------------CGCCGGGTCGGCGTAGGTGATGTTGACGAAGGCCGTGTACCACTCCTCCTTCTCGGCCACGGTGAAGTCCAGGCACAGCAGATGNNNNNNNNNNAAAAAAAGGACAGAG--CATGTTGAGAGAGCCAGGCTGCGGCACGCTTGGATCACAGACATTGCCATCTTCATCTgcc--ggcccccccggccggcccgcccccgccgcccgcctgcgccgcgTGTGCGTGTGTGCCCCGACCGCCGGCTCCG------TGCGGGGCGGCG---------CTGCTCCCGCCGGGCGCCGTGCGGGAAGGGCGGGCGAGGGGGCCCTCCCCTCTGCAGCCCGCCG------CCTAATTCATGTCGGGGCCGTTTGATTTCCTCGGGCTggccccgtccccgccc ..x....x:......:....:...........:...........:....---............x.:.....x.....x...........x:x.:xx....xx........:...:....x............:xx...........:.:....:.......xx.x.:.......x:...x:x....::............xx:.......xx..x....x:..xx.x.:......x........................x..x..x.................xx.......xx..:.x.....x...........---------------------------...x..x.................x........x........:....................:...........x........-----XXXXX..x.......x..x:--.................:....:............x.x...............:...:...--.......:.------...........xx..:x...x..:.x...-----------...:xx:.x..:..:...------:x....x..x:.---------.....x.:..:x:x:x...x..x...:....x.xx.xx...:.x.--------....-......------..x:....xx.x..:.--..xx..--------.x.........x.....x.:. 49M3I266M27D84M5I20M2D61M2D9M6I29M11I18M6D12M9D45M8I4M1I6M6D16M2I6M8I21M 512/641 79.9% 690/94230402 0.0% 96/646 14.9% 110107692 80106863 +3641 chr4 + 190214555 141141850 141141849 141141945 96 GAGAAAGATGACACCAGTGTGGCCCATCAGGTCATCCAGTTCCACCATGGAGAACATTGGGGTGACAAAAGTTAAGGACAATTCTCTCTCGCATTC chr4 + 94230402 24950446 24950445 24950541 24950446 24950445 24950541 96 GAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCC ...:...:x......x::x.:...x::...:...x...:x..x...x...x..x..x..........:.x..::x:.x..:x..x.:...:...:. 96M 63/96 65.6% 96/94230402 0.0% 0/96 0.0% 116191404 74023151 +3519 chr4 + 190214555 141159479 141159478 141159564 86 TGGGCTGTGGGCTAGAGTTT-GCTGACCCCTAATTGTTGTTGTTGTTGTTTTTTGTTTTTGTTGTTTTTTGTTTTTTGTTTTTTTAA chr4 + 94230402 50433329 50433328 50433415 50433329 50433328 50433415 87 TGCGTTTTGGGATGGACTTCCACTTGCAGCCAGTTCTTTTTATTGTTGTTGCTGGTTTTTGTTTTGTTTTGTTTGTTGTTTTTTTAA ..x.:.x....x.:..x..:-:..x:.xx.:.:..x..x..:........x:.x.........x.x........x............ 20M1I66M 63/86 73.3% 87/94230402 0.0% 1/86 1.2% 90726150 NA +3040 chr4 + 190214555 141178229 141178228 141178279 51 AGTATGTGTGTGTGTATGTGTGTGTGTGTGTGTGCGTGCGCATGCACACAC chr4 + 94230402 79265518 79265517 79265568 79265518 79265517 79265568 51 AGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACAC ...:..........:.........xx...:.:.:.:.:.:.:..::..... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 61912711 NA +9108 chr4 + 190214555 141222360 141222359 141222494 135 AAATAGGGGAAAATGCCTAAAAAAAAGACTGGTGCGAGGAAGAAGGCTGAGAACCGCCGAGAACGTGAAAAACAACTAAGAGCATCAAGAAGCACTATAGATTTAGCTAAACATCCATGTAATGCCTCAATGGTA chr4 + 94230402 31054138 31054137 31054272 31054138 31054137 31054272 135 AGACAGTGAAAAATGCCTAAAAAGAAGACTGGTGCTCGTAAGAAAGCTGAGAACCGTCGAGAACGTGAGAAGCAGATAAGAGCTTCAAGAGCCAACATAGATTTAGCCAAACATCCTTGCAATGCTTCAATGGTA .:.:..x.:..............:...........xx.x.....:...........:...........:..:..:x.......x......:x..x:...........:........x..:.....:......... 135M 112/135 83.0% 135/94230402 0.0% 0/135 0.0% 110168222 80046333 +7895 chr4 + 190214555 141224449 141224448 141224710 262 CAGCAGAAAAATTAATGTGA-TATTT---TTATATGTTACAGGAATGTGACAAGTGTCAGAGGTAAATTTTATTTCTTTTTCTATCTACC-----TTTAATAAAATTGTC--CCTCTGACTTTTTATCTGACATTGACCATAATTTAAAATTTTATTTT-------------ACATGACAAGGCGGCAGAAGAATAGAGCATTTTGCTACTTTTGTAATTCTGTACAGAAGTTACCAATTTGTGCACAGTGTGGTAAGTTTGTAATAATTAAGG-ACATATGCTTTT chr4 + 94230402 31054471 31054470 31054748 31054471 31054470 31054748 278 CAGAATAAAAATAATTATCAGTATTTCATTTCTTTTCTTTAGGAATGTGACAAGTGCCAAAGGTAAGCATT-TTTCCCCTTCTAGAGGCTAATAGTTTAACATATTAGTTAGTTTCAAGCATTTTACA-------GGTCTTGTTTTAACATTTTATTCCCCTCCCCCCCTCCATGTGCCTAGACGACAGAAGAATAGAGCTTTTTGCTACTTCTGCAACTCTGTTCAAAAATTACCCATTTGTGCACAGTGTGGTAAG-TGGAAATAATGAAGGCAAACGTGCTATT ...x.x......x.x.:.x.-.....---..x.x.x:.x:................:..:......::x..-....:::.....xxx:.:-----.....:.x.x.x..:--::..x::.x.....:x-------.::.x.:x.....x........::-------------.::..x.x..:..:..............x...........:..:..:.....x..:..:.....x.....................-.x.x......x....-.x.::....x.. 20M1I5M3I42M1D18M5I15M2I16M7D24M13I86M1D15M1I12M 186/253 73.5% 278/94230402 0.0% 34/253 13.4% 110169978 80044577 +7111 chr4 + 190214555 141226751 141226750 141226849 99 TGTTTTTCTTCATTAGGGAAAACAAAGTGCATGATGAAGTCTTCAGACTGTGTCATAAAGCATGCTGGTGTATACAGTACTGGCCTTGCAATGGTGGTA chr4 + 94230402 31056713 31056712 31056808 31056713 31056712 31056808 96 TGTTTTTGTTCA---GGAAAAACCAAATGCATGATGAAGTCTTCAGATTGTGTCATAAAACATGCTGGTGTGTACAGTACTGGACTGGCAATGGTGGTA .......x....---..:.....x..:....................:...........:...........:...........x..x............ 12M3D84M 87/96 90.6% 96/94230402 0.0% 3/96 3.1% 110170038 80044517 +10395 chr4 + 190214555 141229557 141229556 141230277 721 TTCCTTGGTTACAGGGTGCAATATGTGACTTCTGTGAAGCTTGGGTTTGCCATGGTAGGAAATGTCTCAGTACACATGCTTGTGCCTGCCCTCTTACCGATGCTGAGTGTGTTGAATGTGAACGAGGCGTGTGGGACCATGGTGAGTCATTAGACACAAGTAATGA---------------GCTT---------TGTTATAG--GTGAATGT-------------------------TGACTTTGAAA----------------------------------CATTTTGAATGCTGTTTTTGAGATTTTTTTCAGGATACTGTCAAT---CCTAACTACTGGTACTGTT----------------------TTGATTATC----------AGTGTAG-TTAGAGAAGGGATCTA-------------TACTGTCTGTTATTGTCA------------ATGCTAGTA-------------------TTGTTTACCCAAACATGGAGGGAAGTTGTGGTGGAGC--------AGGTAGTCTCTTTGAGCATTGTGAGTGTTATATGGGTAGCTAGTGGAGAGTAAGAGCCCC-------------CTTTTCTCAGTTT-----------------CAGTTCAGTTTCA---------------AGGACTTCAACAGTTTTCATTTTAGCT---------------------TTTATCAGAATAAAAATGGCTGAACAATTTTGGTGTATCTCCAAAGTAACTTACCATCTCTTCTAAGCAGTATTA---------TAGATATGAGTTTTTTTAAATTAAAGTTTATCTTAATTACATTTGT-----------------------------------GTTTTTTTA---------ATCCAATAGGAGGCAGAATATTCAGTTGTTCTTTTTGCCATAACTTTCTCTGTGAAGATGATCAATTTGAGCATCAAGCCAGCTGCCAGGTTTTAGAGGCAGAAACATTTAAATGTAAGTT chr4 + 94230402 31057547 31057546 31058523 31057547 31057546 31058523 977 TTCTGTAATTGCAGGGTGCAATCTGTGATTTCTGTGAAGCTTGGGTATGCCACGGGAGGAAGTGTCTCAGCACACATGCGTGCATCTGCCCTCTTGCTGATGCAGAATGTATTGAGTGTGAAAGAAGCGTCTGGGATCACGGTAGGTTGTT---CACAGTTAATGACAAAATCTAAATTATGCTTTTCCTCTCATGTTACAGAAGTTATTGTACCTATATGCTCAGCGTAACATTTCTGATCTTCAAGGTTAGTATATGTGGTCAAAGCAAGGCATTCTCCCCATTTTAAAAACAGATCTTATGAAGT------GGGGAATGTCAGTGTGCCCGAGAACACGTACTGCTTAACTCAGGGACATATATGTAATTAATTGTCCCATCAGCTGAATGCTGCTTAAGTACTGCATCTGATAGTCGACATGCAATTTTCTGCCATTCTCACCCCTTTCATCTACACTAGTATGGGTATTTGGGTTCCCAGTTGCCTGGCAAACCATATTGATCACCATTTGTGGAGTCCTTTCAAGTGTAATTTCAGTGTGCATCAGAGGTG----------AGGGGGTGGGAAGGAACAACACTGGATGAGAGAAGATCTGATGCAATTTAAATAACGCTAAAATGCCAGTCAAATTGAAAAAAAAACTACTAGTAGTACTTGTTCTGTATTTATGCTGTCTTGTCTTGTAGGAAACGTGGTGTTTTTCAGAGTAATAGTGGATG-------CTAGTGTC---------TAATTTAGAACTTCCTGTTAGC-GTGTTAGACAGAGGGCAGAACTGGTGTTCAGTGAAAAAAGAACCCACATAACTGCCTCAGTTGTGGAGCAGAACTTGGTGCCTATGCCTGTTACTGGTTATTTTGCCTTGATACATCTTCCAGGAGGCAGAATGTTTGCCTGTTCTTTTTGCCACAATTTCCTCTGTGAAGATGACCAGTTTGAGCATCAAGCCAGCTGCCAAGTTTTGGAAGCAGAGACATTTAAATGTAAGTT ...:x.::..:...........x.....:.................x.....:..x.....:........:........x..:::..........:.:.....x..:...:....:......x..:....x.....:..:...::..::..---....:x......---------------....---------.....:..--..x.x...-------------------------...::..x..:----------------------------------......:..x:.x.x.:..:x..xx.------..:x.x.....:.---..::.xx..xx......:.----------------------..:...:..----------.:..:x.-...::x.xx.x....:-------------x.:.x....::...x...------------.::......-------------------...::.:x.x..x...:xx.:xx.x:xx.x......:--------:x...:.:..xx..x....::x::...----------..xx:....::..x..x.:.x.:-------------::.xx:x..:...-----------------....:x.:..xx.---------------..x....xxx.x..x..:..x:.:x..---------------------...x.....:...x.:...x..-------:.:....x---------...:...xx.::..:.x.x...-..:...---------:...xx..:xx..:xx.:..xx..::x::xx.x...:.:.x.:x..-----------------------------------...x....:---------...:xx:............:..::x:..............:..:..:..............:..:.......................:.....:..:.....:................. 151M3D12M15I4M9I8M2I8M25I11M34I26M6D13M3I19M22I9M10I7M1I16M13I18M12I9M19I37M8I27M10D23M13I13M17I13M15I27M21I22M7D8M9D22M1D6M9I46M35I9M9I121M 479/685 69.9% 977/94230402 0.0% 328/685 47.9% 110172010 80042545 +4252 chr4 + 190214555 141231370 141231369 141231488 119 TTGATAAAAGACAAAAGAAAATTCTAAGAACCAAATAACGGGATTTTAAAATTAATCTATTTCCCACAGGTGTTTCATGCAATCGGCTTGGTCAGCACTCATGTCTCCGTTGTAAGGTA chr4 + 94230402 31059656 31059655 31059774 31059656 31059655 31059774 119 TTAAAAAAAAATAAATCAGACCTGCAGTTTCCAAGTAAAGAGTTTCACATACTTCTTTTCCACCAACAGGTGTTTCCTGTAACAGGCTTGGGCAGCATTCATGCCTGCGTTGTAAGGTA ..:.x....:.:...xx.:.x:.x:.:xxx....:...x.:.x..:xx.x.:.xx.:.x::x..x...........x..:..:x.......x.....:.....:..x............ 119M 79/119 66.4% 119/94230402 0.0% 0/119 0.0% 110171714 80042841 +9195 chr4 + 190214555 141232473 141232472 141232647 175 TGTATATTTTTACATTTT---TATTTATTTACTTTATTTTGCTTCTCCTATACAGGCTTGTTTCTGTGATGATCATACAAGGAGCAAAGTGTTTAAGCAAGAAAAAGGAAAACAGCCTCCTTGTCCTAAATGTGGGCATGAAACTCAGGAGACTAAGGACCTTAGCATGTCAAGTAAG chr4 + 94230402 31060786 31060785 31060963 31060786 31060785 31060963 178 TGTATGCTCATACGATTAAAACATTTAGCCTTTTCATTGTCTTTTCACCCTACAGGCTTGTTTTTGTGACGATCATGTGCGAAGTAAGGTTTTCAAGCAGGAAAAGGGAAAAGAGCCTCCCTGCCCTAAATGTGGCCATGAAACTCAGCAGACAAAGGATCTGAGCATGTCAAGTAAG .....::.:x...:x..x---:.....x::x:..:...x.x:..::x.:x.............:.....:......:::x.:..:..:..x..:.....:.....:......x.......:..:...........x............x....x.....:..x............... 18M3I157M 132/175 75.4% 178/94230402 0.0% 3/175 1.7% 110171687 80042868 +15655 chr4 + 190214555 141233698 141233697 141233988 291 TTGTCTGTCT-TCTATAGCACGCTCCCTGAAATTTGGCAGGCAGACTGGAGGTGAAGAGGGAGATGGAGCTTCTGGGTATGATGCTTATTGGAAGAACCTTTCATCTGATAAGTATGGTGATACCAGCTACCACGATGAGGAGGAGGATGAGTATGAAGCAGAGGATGATGAAGAGGAAGAAGATGAAGGCAGAAAGGATTCAGATACTGAGTCATCAGATTTGTTTACTAATTTGAATTTAGGAAGGACCTATGCTAGTGGCTATGCTCACTATGAGGAACAAGAGAACTA chr4 + 94230402 31061585 31061584 31061876 31061585 31061584 31061876 292 TTTTCTCTCTGCCTACAGCGCGCTCTTTGAAGTTTGGCCGCCAGACTGGAGGTGAAGATGCAGATGGAGCTTCTGGTTATGATGCCTACTGGAAGAACCTCTCCTCCAGCAAGGCCGGAgatgcaggtgatcatgatgatgaatacgatgaatatgaagcagaagatgacgatgaagatgatgatgGAGGAGGGAAGGATTCTGATACAGAGACCACAGATGTATTCAGCAATTTGAGTTTAGGGAGGACTTACGCTAGTGGGTATGCACATTATGAAGAACCTGAAGATTA ..x...x...-:...:...:.....::....:......x.x.................x.x...............x........:..:...........:..x..::::...xx:..x...:.x:.:x.:..:.....x..:x.x.....:...........:.....:..x..:..x..x....:...x:.:........x.....x...x.xx.....x.:..:.x:.......:......:.....:..:........x.....x..:.....:....xx..::.:.. 10M1I281M 221/291 75.9% 292/94230402 0.0% 1/291 0.3% 110172113 80042442 +3050 chr4 + 190214555 141234708 141234707 141234761 54 ATTATATTTAATTTTTTGTTCTGTATTTTCAGTTTGTTTTGGAAAGCATTCTAA chr4 + 94230402 8210272 8210271 8210325 8210272 8210271 8210325 54 ATTCCACTTAATTTTTTATTCTATATTTCCAGTTTGGTTAGGAACATGTTCCAA ...x:.:..........:....:.....:.......x..x....x:::...:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 133024436 57190119 +3220 chr4 + 190214555 141251037 141251036 141251119 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGGGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........:.::........x.xx.x...xx:.x.........:..x:xx..x:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 65217840 NA +3063 chr4 + 190214555 141252711 141252710 141252771 61 AAAAAAAAAAACCCAAAAAACAAAAAACAAAAAAAAACAAGCAAACAAACAAAACTTTACA chr4 + 94230402 12520830 12520829 12520890 12520830 12520829 12520890 61 AAAAAAAAAAAACCAAAAAATGAAAGAACAATAACAACAAACAAATGGGTAAAACTGGACA ...........x........::...:.xx..x..x.....:....:::::......xx... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 128731881 61482674 +3190 chr4 + 190214555 141252711 141252710 141252844 134 AAAAAAAAAAACCCAAAAAACAAAAAACAAAAAAAAACAAGCAAACAAACAAAACTTTACACTGCAG---TTTGTA------ATGCCCTAAATGTATTTTACATTTCCAGAAGTTATGATTGATTTTTCTT---TAAAATATCTGT chr4 + 94230402 65925318 65925317 65925463 65925318 65925317 65925463 146 AAAAAAAAAAAACCAAAAAACCAACCTCACCAAAAAACAAACGAAAAAACAAACCTAGAAGTTGTTGATCTCTGTATCTTCCGTATCTTAAAAGAAAATTTAAGCTTAAAAGGGTTTTCTTGTTTCTTCTTTTGTAAAATATGTAT ...........x.........x..xxx..xx.........:.:..x.......x..xx.x::..:x.---.:....------:.::.:....x.x.xx..xx.x:.:x.:.:.x.x.xx...x..:.....---........x.:. 67M3I6M6I49M3I12M 91/134 67.9% 146/94230402 0.0% 12/134 9.0% 75327393 NA +3126 chr4 + 190214555 141293249 141293248 141293283 35 AAAAACAAACAAACAAACAAAAAAAACCCAATAAA chr4 + 94230402 77919164 77919163 77919198 77919164 77919163 77919198 35 AAAAACAAACAAACAAACAAAAAAAACCCAACAAA ...............................:... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 63374085 NA +9181 chr4 + 190214555 141293770 141293769 141294032 263 GAGTGCTGGGTGCTTCTTTCA----TCTGCAGGTAATGTCATTATATATTGCAATCACTCTAATGGCATCTGCTCATTAGGAATTCATTGAGTGCTCATGTGGCTATAATGCACTTCCATTTGTATTCTGAAACAATTTAGCATTGGGGAACTTAAAAGTCATTTGATCAATCCTGTGTGGAGCTCCTGTTTTCACTCCAGGCAAATTAATGTGAAGATCATTGTAACACATTAAACATCT--AATTGTTCATTGATGAAGCAGTAACA chr4 + 94230402 31064394 31064393 31064653 31064394 31064393 31064653 260 GAGTTCTGGTCACCTCTGTAAGCTCTTTTCTGGCA---TCACAGTGTGTTACAATGG---TGACAGCGCCAGCTCATTATGAATTCATGGGGTGCTTTTATGGATATAATGTATTTCCATTTGTATTCAGGTGTAATTTAATACCAGTGA--CTGGGAGTCGTTTGGTCAATCCTGT-TGCAGTTACTGGTTCTGTTTCCAGCAAGTTTATGTGAAGATCATTGTAATGTACCGAACAGTTGCAATTGCCAGCTGATGAGGCAGTAGCA ....x....x::.:...x.x.----.:.x.x..:.---...:x:.:.:..:....x:---.:.::..::.x........x........x.:.....:x.:...x.......:.:..............x.:x::......::.:::.x..--:.:::....:....:..........-..x..:.x...x..::::.:.x:....:..x..................:::.:::....x:.--.....::x::......:......:.. 21M4I10M3D19M3D90M2D25M1D63M2I26M 175/254 68.9% 260/94230402 0.0% 15/254 5.9% 110229376 79985179 +3016 chr4 + 190214555 141314202 141314201 141314259 58 TTATATTTTTTATATATACATATATATACACACACACACACATATATATACACACACA chr4 + 94230402 50629522 50629521 50629579 50629522 50629521 50629579 58 TTTTAGCTTTAATATATACCTATATAAATATGTATACACACATGTAAATACACAAACA ..x..x:...x........x......x.:.:::.:........:..x.......x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 90684680 NA +3356 chr4 + 190214555 141358387 141358386 141358507 121 TTCAAAAATTTCTTTCTTTCTTCTTTC---TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 63697109 63697108 63697239 63697109 63697108 63697239 131 TCCACAGACTTTATTCCT-CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x.:.:..:x...:.-..:.....---.x.:..:.....:....:.:x..::.:.x....xx.....x.:.----.:..:x:.:....----.:.:.:...::.:.::..........::.:...x... 18M1D8M3I44M4I13M4I37M 80/120 66.7% 131/94230402 0.0% 12/120 10.0% 77661278 NA +3228 chr4 + 190214555 141358389 141358388 141358452 64 CAAAAATTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 90927818 90927817 90927881 90927818 90927817 90927881 64 CAAAAAATTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCTCCT ......x...:.:.:::x......:...:.........xx.:.....:.:......::::..:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 50430571 NA +3307 chr4 + 190214555 141358396 141358395 141358535 140 TTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCT-CTTTCTTTCTTTCT-TTCTTTTTCTCT chr4 + 94230402 19215425 19215424 19215566 19215425 19215424 19215566 142 TTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ..:...:...:..xx....xx.xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x..:..:xxxx:....:..xx:..:.....-.:..x.x.:.....-.:..:.x..... 114M1I14M1I12M 88/140 62.9% 142/94230402 0.0% 2/140 1.4% 122142971 68071584 +3164 chr4 + 190214555 141358398 141358397 141358543 146 CTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTTCTCT chr4 + 94230402 19215423 19215422 19215566 19215423 19215422 19215566 144 CCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACT--TTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .:..:...:..:...xx....xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x..:..:xxxx:..:....xx:.--.:.....x:...x:x..:..:.x::....x..... 109M2D35M 86/144 59.7% 144/94230402 0.0% 2/144 1.4% 122142975 68071580 +3658 chr4 + 190214555 141358401 141358400 141358506 106 TCTTTCTTCTTTCTTTCTTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176308 50176307 50176414 50176308 50176307 50176414 107 TTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT .:..x.x.:x........x......x.-...x..:..x::.............:xxxx.::x.:.:.::x:......x::.:...::.........::.:.x..... 27M1I79M 70/106 66.0% 107/94230402 0.0% 1/106 0.9% 91182093 NA +3550 chr4 + 190214555 141358407 141358406 141358527 121 TTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697119 63697118 63697239 63697119 63697118 63697239 121 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x..:..:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:.:..:::::..:........:....:.x.:. 121M 71/121 58.7% 121/94230402 0.0% 0/121 0.0% 77661288 NA +4116 chr4 + 190214555 141358409 141358408 141358531 123 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.....:..::::::..........:....:.x... 123M 76/123 61.8% 123/94230402 0.0% 0/123 0.0% 77661292 NA +4267 chr4 + 190214555 141358413 141358412 141358535 123 CTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.......:..:.:.::..........:......x.:. 123M 77/123 62.6% 123/94230402 0.0% 0/123 0.0% 77661296 NA +3883 chr4 + 190214555 141358417 141358416 141358539 123 CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x:.::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:...:x.xx.........::.:.::..........::.:.:.x... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% 77661300 NA +3057 chr4 + 190214555 141358418 141358417 141358500 83 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTC chr4 + 94230402 57372028 57372027 57372110 57372028 57372027 57372110 83 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x...:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 83986390 NA +3526 chr4 + 190214555 141358422 141358421 141358543 122 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT----TCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:.:----...:.:...::.:.::.......:.::..:...x.:. 13M3D69M4I37M 76/119 63.9% 123/94230402 0.0% 7/119 5.9% 77661305 NA +3037 chr4 + 190214555 141358425 141358424 141358508 84 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x.:.:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 83986398 NA +3334 chr4 + 190214555 141358426 141358425 141358561 136 CTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTTCTCTCTT---TCTTTCTTTCTTTCG chr4 + 94230402 19215418 19215417 19215561 19215418 19215417 19215561 144 CCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTG .:::.::.:...:...:...xx....-----......x..::...x......xxx....x.x..::::xx:........x.......:x.:x..:..:xxxx:....:..xx::.:.....x:...---.:.....x..:.::. 26M5I95M3I15M 85/136 62.5% 144/94230402 0.0% 8/136 5.9% 122143008 68071547 +3451 chr4 + 190214555 141358430 141358429 141358549 120 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTTCTCTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx....--....xxx::..:x:.:....x.xx.......:..:::::......:....:..:.:.x.:. 13M1I46M2I61M 76/120 63.3% 123/94230402 0.0% 3/120 2.5% 77661313 NA +3058 chr4 + 190214555 141366857 141366856 141366915 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx::x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 65333651 NA +3691 chr4 + 190214555 141406552 141406551 141406681 130 AGAGTCCATAGAGAAGACAGCTTCTGTCAATATCACATAAATGCATATATGATTACTCCATAGCTTAATTCACAGTGTTTTAGCACATAATGGTGCTTCTGCAGCAATGTTAGAAGTAGCCCAGA-CTCTG chr4 + 94230402 79621894 79621893 79622024 79621894 79621893 79622024 131 AGAAGCAGCAGAAGATTCACTTGCCATTAATATAGCACAGATGGAGAAACGTTTACTTCATGGCTTAATTCATAATGTTCTCCCACATGTAGGCTCCTCAGTGAAGACATTAGTACTGGCCTACAGCTCTG ...:x.x::...::.xx..x:.x.::.:.....x:..:.:...x.x.x.:.x.....:...:..........:.:....:.xx.....:xx..:x.:..x.:::x:.::....x.x.:...:.x.-..... 125M1I5M 80/130 61.5% 131/94230402 0.0% 1/130 0.8% 61784658 NA +3322 chr4 + 190214555 141417011 141417010 141417079 69 CAGGGGTGTCCAATCTTTTAGTTTCCATGGGCCACGTTGAAAGAAGAGTTATCTTGGGCCACACATAAA chr4 + 94230402 65178282 65178281 65178350 65178282 65178281 65178350 69 CATGAGCATCCAACATTTTAGCTTGCTTGGGTTGCACTGAATGAAGAGTTGTTTTGGACTGCATACAAA ..x.:.::.....:x......:..x.x....:::.::....x........:.:....:.::..:.:... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 76238729 NA +3426 chr4 + 190214555 141447378 141447377 141447487 110 AAGAGAAAGAAAAAAAGAAAAAAGAAAGAAAGAGAGAGGAAAGAAAGAAGAAAGAAAGAAAGAGAAAAAGAAAGAA----AGAGAAAGAAAGAAA---------------GAAAAGAGAAAAACAAAAA chr4 + 94230402 86868415 86868414 86868543 86868415 86868414 86868543 129 AACAGAAGTGAAAGAAAAAGACGGTCAACAAGACAGAGAAGTGAAAGGATAAAGAAAAGAAGATTCAAACAAAGAACAGTAGATGAAAAAAAAAATCTATACAATTTATGGAGGAGAAAAAAAAAAAAA ..x....:x:...:..:..:.x:.xx.:x....x....:.:x.....:.x.......::....xxx...x......----...x:..:...:...---------------..::...:.....x..... 76M4I15M15I19M 77/110 70.0% 129/94230402 0.0% 19/110 17.3% 54578963 NA +3027 chr4 + 190214555 141450808 141450807 141450912 105 TTTGTTTTTTTTCCTTCCTCCTCTTCTTTGTCCTGTCTTTCTTTTGATTTTTTTAACTTTTGACTTTCATCTTTGTTTTGGTCTTTTTCTTTCTCTCTCTTTTTT chr4 + 94230402 92736015 92736014 92736119 92736015 92736014 92736119 105 TCTGTTTCCTTATCCTCCTCCCCTGCTTTCTTTTGGCATTGATTTATTTTTAATCTGCTGTAACTTCTATTTTGGGTTTGTTTATTTTTGTTTGTTTTTTTTTTT .:.....::..x:.:......:..x....x.::..x.x..xx...:x....xx.xxx:.x.:....::..:..x.x....x.:x....:x..:x:.:.:...... 105M 65/105 61.9% 105/94230402 0.0% 0/105 0.0% 48714793 NA +3028 chr4 + 190214555 141531302 141531301 141531372 71 AATAGTGTATCGAA------TTCAGAACTTTTACTAAATAAGTAGATTTTAGCAATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9743734 9743733 9743810 9743734 9743733 9743810 77 AACAACTTATTGAAATAAGCTTCAGAGTATTTATTACATAAGTACATTTTAGTGTTTTTTTTTTTTTATTGCTTGTT ..:.::x...:...------......::x....:..x.......x.......::x............x..x:..x.. 14M6I57M 53/71 74.6% 77/94230402 0.0% 6/71 8.5% 131787568 58426987 +3221 chr4 + 190214555 141535641 141535640 141535714 74 TTTCTTTCAAATTCTGTTAATGCT------GATATTTTGACCTCCTGGAAGTTTTTTGTTTGTTCGCTTGTTTTATTTTT chr4 + 94230402 56840333 56840332 56840412 56840333 56840332 56840412 80 TTTCTGCCAGAGCCTATTAAGATTTAACATGACTTTTTGATCCAGTGGTAGTTTTTTGTTTGTTTGTTTGTTTTGTTTCT .....x:..:.x:..:....x::.------..:x......:.:xx...x...............:.:.......:...:. 24M6I50M 54/74 73.0% 80/94230402 0.0% 6/74 8.1% 84695308 NA +3139 chr4 + 190214555 141556835 141556834 141556874 40 TGTGTATATATATATATATACACACACACAGATACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA ...::.......................x...:....... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 137147753 53066802 +3255 chr4 + 190214555 141573780 141573779 141573862 83 CATGATGATGCATACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGAGAGGATCATCTGAGCCTGGGAGCTCCAGGCTTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::..:....--.x......:.......:...::........x:xx.x.:.x..::...:..::.:....:::....x:.. 12M2D69M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 65540583 NA +3035 chr4 + 190214555 141579957 141579956 141580040 84 CTCTCTCTTTTCTTTTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.:.........x.::..x.:::::.::.:.::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 84207931 NA +3447 chr4 + 190214555 141579957 141579956 141580098 142 CTCTCTCTTTTCTTTTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 21408807 21408806 21408948 21408807 21408806 21408948 142 CTTTTATTTTCCTTTTTACTGGTTCTTTCTAT---TTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC ..:.:x:...:......x..xx........x.---...x.:.:........xxx..--...:::.::..:.:.:.x.xxx..-...................::.::.:xx::..x:.x:xxx...x::......::.x:..... 32M3D21M2I24M1I62M 89/139 64.0% 142/94230402 0.0% 6/139 4.3% 120171150 70043405 +3874 chr4 + 190214555 141579981 141579980 141580103 123 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTT-TTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:..xxx:....-:.:....x:xx.......:.::.:.::..........:....:.x.:. 13M1D61M1I48M 80/122 65.6% 123/94230402 0.0% 2/122 1.6% 77882864 NA +3937 chr4 + 190214555 141579984 141579983 141580195 212 TCTTTCTCTTTCTTT-------CTTTCTTTCTTTCTTT---CTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTT--TTTTTCTTTCTTTCCT chr4 + 94230402 22118198 22118197 22118422 22118198 22118197 22118422 225 tCTCACTCTTTGTTTGGCAGTACTTCCATTCCCTTCCTGGACTCACATTCTTTCCCATGCTGCTATCATTTTTTTGTGATATTTCTTCTCATGTCCTTAGTACCTCTTCTTTTCTTTCAAACCTTTTCTCTCTCCATTTCCCACTTTTTATTTGGTCACTCTTCTTCTTATCTTGCCATATGTTGTTGTTTTGTACCTTCTCTTTTTTATTCTCCCTTCTTCTCT ...:x......x...-------...:.x...::.:::.---..:x.x.......::-.x:.x..x..x..:....x.xx:x...::.:..x.x::...xx.x::....::........xxx.:..:.:...:..:x.:.::.x:.:...x...xx.:x:..:.:.:::.x....x.:x.x.x..x:.x....x.x:.....:.:...--..:.:.:.....::.. 15M7I16M3I15M1I150M2I16M 127/212 59.9% 225/94230402 0.0% 13/212 6.1% 119461786 70752769 +3440 chr4 + 190214555 141579987 141579986 141580108 122 TTCTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCT-----TTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874866 48874865 48874992 48874866 48874865 48874992 127 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCT-TTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ......-.....:x:x.x.:.....:.x.xxx.....x...:::.-...x.:..:.x...x.........x...-----...:.......x:...:.:.x....::xx.x...x.x...:.:.::... 6M1I38M1D28M5I49M 83/121 68.6% 127/94230402 0.0% 7/121 5.8% 92705121 NA +3308 chr4 + 190214555 141579989 141579988 141580183 195 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTT----TTCTTTCTTCTTTCTTTTTTT chr4 + 94230402 8009567 8009566 8009765 8009567 8009566 8009765 199 CTATATATTATTCTCTTTTTTTTTCTCTTTCTTAACCTATTGTAACCCCTTTTTCTGTTATTCCCTTCATTACCTCCTTCATTGTATTCTTCAGTTAAACCCTTTCTACTATAAGAGTTTCTCATTTCTCATCCTTTATTCCTTCCATGCTCTTATTATTCCAGTCTTTCCCCTAATATACTCACCCATTTCTTTCTTT ..x.x.x..x:.:.....:...:.:........xx::.x..x:xx:.::.:.....x..x..:.:..:x:.x:..:::..x..x.x..::.:xx..xxx::......x::x.xxxxx:..:::x.:.:..x.:....x..:.....x.x.....x:.x.:::xx......:.:.----.x..:x.::x.......:... 174M4I21M 109/195 55.9% 199/94230402 0.0% 4/195 2.1% 133570422 56644133 +3069 chr4 + 190214555 141579997 141579996 141580077 81 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ......:..x:..x..:x:..:x.:.x.x.:..::...x:.:x.::x..................:....::xx.....:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 117603496 72611059 +3178 chr4 + 190214555 141580000 141579999 141580196 197 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTC----------TCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTTTCCTT chr4 + 94230402 67728277 67728276 67728483 67728277 67728276 67728483 207 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCT .....x:..x....:....xx:.::..:x.......x.x...x:x::.....:....:.::.x:x:.::.:..x.x..::.:.:.x.::x::.x:.x::x:..:.x..x::..:.::x::....x:.::xx...:..:...x.:..:..:x.:x.::x.----------..:.::...xx:..:..:.....:x..:x:..:::.:. 159M10I38M 103/197 52.3% 207/94230402 0.0% 10/197 5.1% 73851723 NA +3014 chr4 + 190214555 141580008 141580007 141580106 99 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC .:.x.....:.......:.:x.xx.....:x::::x....:..x.:x.xxx...:x:.x::x..x..x.:.::...x.....:..:...:......... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 111048796 79165759 +3748 chr4 + 190214555 141580013 141580012 141580142 130 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCT----------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTT chr4 + 94230402 13100826 13100825 13100965 13100826 13100825 13100965 140 TTCTCTCTCCTCTGCTTTTATTTTTGGTTTGTTTTGATTTATTACTCTTAATTATTCTGTATTTTCTTGCATTCCTTTTAGTAAATCAGTTTTTCCTATCTCAATTATTTTTTTTTCCTCTTTCTTTCCCCCTTTCTCCT ....:...::::.x....:x..:..xx...x....xx..:x..x:::..xx..x.::.x:x.......x.x...:..:.----------..:..:..x...:xx..x:...:...:::..........::........:. 79M10I51M 83/130 63.8% 140/94230402 0.0% 10/130 7.7% 128479187 61735368 +3221 chr4 + 190214555 141580017 141580016 141580095 79 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTT--TCTTTCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ......:..x:..x..:x:..:x.:.x.x..:.:.:..x:..x.:.x..:...............:....:.--....... 72M2I7M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 117603516 72611039 +3316 chr4 + 190214555 141580030 141580029 141580130 101 TCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x...::::..::..:..x.:....:..x..x......x.x....::x:.xx....x..----.:..:.:x::.:.:...x:.x......x.....:...... 61M4I40M 66/101 65.3% 105/94230402 0.0% 4/101 4.0% 108684432 81530123 +3084 chr4 + 190214555 141580038 141580037 141580123 86 TCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTG---TCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:...........x---.::..x..:.:..::.:.:...xx:.x..x.:.........:...::...x.....x..xx:.x..... 14M3D69M 57/83 68.7% 83/94230402 0.0% 3/83 3.6% 84208011 NA +3000 chr4 + 190214555 141580041 141580040 141580128 88 TTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 40546861 40546860 40546948 40546861 40546860 40546948 88 TTGCTTCCTTGCTTCTTATTGATTTCTCTTTCTGTTTTCTCCTTCCTTTGGATTTTGATTCCCTCCAGTTCTTGTTTTTCTTTTTGTT ..x:..:...x...:..x..xx...........x...::.:...:....xxx.:..xx..:.:.:.xx.::..x...:.:.:...x.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 101033180 89181375 +4024 chr4 + 190214555 141580046 141580045 141580157 112 TTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x...:.:.:.....:xx:x:.....:...:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..::.::..:........:......x... 64M5I11M5I37M 77/112 68.8% 122/94230402 0.0% 10/112 8.9% 77882928 NA +3431 chr4 + 190214555 141580048 141580047 141580171 124 CTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..::...:-.....:xx.x:...:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:...:..:::::..........:::..:..x:.. 13M1D110M 74/123 60.2% 123/94230402 0.0% 1/123 0.8% 77882931 NA +3015 chr4 + 190214555 141580052 141580051 141580135 84 CTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..........::..x..::.x.::.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 84208026 NA +3228 chr4 + 190214555 141580056 141580055 141580150 95 TTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x.:x.....x.......xx.:::..........:.:.:x:.:xx:.::x.....x.x..:..::x..:.....:.:..:..::. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 58253122 NA +3604 chr4 + 190214555 141580058 141580057 141580175 118 CTTTCTTTCTCTTTCTTT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:::..:-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:..:.x:xx.......:..:::.::.....:.:...:..:..x... 18M5I100M 73/118 61.9% 123/94230402 0.0% 5/118 4.2% 77882941 NA +3699 chr4 + 190214555 141580061 141580060 141580182 122 TCTTTCTCTTTCTTTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCC---CTCTTTTCTTTCTTCCTTTTTATTT .:.x.::..:..:...:.x---..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:::....x.xx.......:.::.---...............:..:..x... 19M3I75M3D25M 78/119 65.5% 122/94230402 0.0% 6/119 5.0% 77882943 NA +3062 chr4 + 190214555 141580068 141580067 141580187 120 CTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC----CTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..::...:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.::----.:..:x....:.:x.xx.:.:.:....:::.....::.:.:.:::.....x:.. 13M1D52M4I54M 72/119 60.5% 123/94230402 0.0% 5/119 4.2% 77882951 NA +3855 chr4 + 190214555 141580070 141580069 141580184 115 TTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTT chr4 + 94230402 63697122 63697121 63697238 63697122 63697121 63697238 117 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ...:.:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx....--....xxx:.:..x..:....x:xx.:.....:..:.:.:.:..::.....:......x.. 55M2I60M 74/115 64.3% 117/94230402 0.0% 2/115 1.7% 77882948 NA +3519 chr4 + 190214555 141580078 141580077 141580188 111 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTT------TCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx....:x.:.:xxx:::..x.....------.........:::..:.:.........::....:x.. 18M5I57M6I36M 73/111 65.8% 122/94230402 0.0% 11/111 9.9% 77882961 NA +3065 chr4 + 190214555 141580131 141580130 141580207 77 TTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTTTCCTTCTTTCTTTTAT chr4 + 94230402 76394490 76394489 76394566 76394490 76394489 76394566 77 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTCCTTTTTTTCTTTTGCCTCTGCTCTTTAAT ......:x...:...:.....:..:.x.:..:::x..xx...:x...::.....:.:.:..x...::x:.....x.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 65185641 NA +3040 chr4 + 190214555 141580141 141580140 141580191 51 TTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTT chr4 + 94230402 8296022 8296021 8296072 8296022 8296021 8296072 51 TTTCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT .......x....xx:...xx.....:..:..........:........:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 133284119 56930436 +3006 chr4 + 190214555 141580148 141580147 141580215 68 CTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTTTCCTTCTTTCTTTTATCTTAATTG chr4 + 94230402 939587 939586 939654 939587 939586 939654 68 CTTCTGCTTTCTGTCTTCTTTGAATTTTTACATTTTTTTTTCTTTCTTTCTTTTATTTAACCCAACTG ...:.x......x.:......xxx:...:x:x.....:........:......:x....x.::..:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 140640561 49573994 +3388 chr4 + 190214555 141603736 141603735 141603818 83 CGTGGTGACGCACGTCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATTGGTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::...::......--.....:.........:x.:........x.xx.x...x::x..........:..x.xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 65570539 NA +3221 chr4 + 190214555 141639949 141639948 141640024 76 ATGTCTATATGTGTGCATATATGACTATATGTGTATATATACTGTGTATGTGCATATATGTGTGTGTATGTATATA chr4 + 94230402 7744571 7744570 7744646 7744571 7744570 7744646 76 ATGTATAAATGTTGGCGTGGTCCAGCATGTGTGTATCTATACTATGAGTAGGTAAATAGGTGTGTGTATGTATATA ....x..x....xx..:.:xx:x.x:..:.......x......:..x:.:x.:.x...x................. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 133895378 56319177 +3131 chr4 + 190214555 141695242 141695241 141695295 54 AGTCTCTCTTCTGCTCTGCTTCTATGATACCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 14829156 14829155 14829209 14829156 14829155 14829209 54 AGTATTCTTTCTTCTCTGTCTGTGTGGTACTTTTTTTTTTTTTTTTTCCTTTTT ...x.:::....x.....::.x.:..:...:................::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 126866086 63348469 +3080 chr4 + 190214555 141735297 141735296 141735354 58 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGA chr4 + 94230402 76033206 76033205 76033263 76033206 76033205 76033263 58 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....x......:.........:.::........x.xx.x...xx:.x.........:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 65702091 NA +3025 chr4 + 190214555 141749097 141749096 141749149 53 ACAGAAACAAACAAACAAACAAACAAATTAACAACAACAAAAAGACCTATCAA chr4 + 94230402 33269896 33269895 33269948 33269896 33269895 33269948 53 ACAAAAGCAAGCAAACAAACAAACAAAAGAAATCCAACAAGAAAACCTGCCAA ...:..:...:................xx..xxx......:..:....::... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 108479201 81735354 +3462 chr4 + 190214555 141751040 141751039 141751109 70 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x......:...........::........x.xx.x...xx:.x.........:.. 10M2D58M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 65717843 NA +3504 chr4 + 190214555 141755651 141755650 141755736 86 CTCTGTCAAAACA-AAAAAAAACAAAAAAAAAAACAAAAAAAAAACAAAAAAAACAAAGAAAGATAAAGCAAGAATATAAATGTTGA chr4 + 94230402 73664706 73664705 73664788 73664706 73664705 73664788 83 CTCTGTCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAA-AAAAAAAACCCACAAAGATAAAT---GAATTTAAACAATGA ..........x:.-....:......x:.x..x.............-.........xx.x.........x---....x....::x... 13M1I31M1D23M3D15M 67/82 81.7% 83/94230402 0.0% 5/82 6.1% 68090945 NA +3046 chr4 + 190214555 141777674 141777673 141777737 64 CTTTCTTCACCATAAATTGTTATACACACACACACAAACACACACACACACACACACGCACACA chr4 + 94230402 67290019 67290018 67290082 67290019 67290018 67290082 64 CCTTCTTCCTAATAAGTAACTATAAACATCCAAACAAACACAAACACACACACACAAAAAAACA .:......x:x....:.x::....x...:x..x.........x.............x:x.x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 74487655 NA +3562 chr4 + 190214555 141781777 141781776 141781897 121 TGTGGTCCCAGCTACTTGGGAAGCTGAGGAGAGAGGATTGCTTGAACCCAGGAGGTCGAGGCTGTAGTGAACCATGAT--CAAACCACTGTACTCC---AGCCT----CCAGCCTGGGGAACAGAGTGAG chr4 + 94230402 76033211 76033210 76033337 76033211 76033210 76033337 127 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAG ...:..:...........::.:......xxxx.x.:.x::...........:..x.:x:........---.x......--...:.x:x...::x..---.....----.....x...x..x::x..x... 67M3D8M2I16M3I5M4I22M 84/118 71.2% 127/94230402 0.0% 12/118 10.2% 65748566 NA +3195 chr4 + 190214555 141791757 141791756 141791860 104 ATATATGTGTGTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATA--------------------TCTTTGTCTATGCATAGACTCCACCTAGA chr4 + 94230402 85834534 85834533 85834657 85834534 85834533 85834657 124 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCACTTGAA ..x:..x.....x:..:..:..........:.xx:...:x.::.:::......x...:..:.x...::.:.:...--------------------.::..x.x....:.:.:.:.....:.::. 75M20I29M 67/104 64.4% 124/94230402 0.0% 20/104 19.2% 55957223 NA +3599 chr4 + 190214555 141791772 141791771 141791850 79 TATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTATGCATAGAC chr4 + 94230402 85834533 85834532 85834611 85834533 85834532 85834611 79 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACAC ...x.:.x.....x.................:.xx:.:..x::...:....:..x...:..x...:.x:.::....x.. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 55957239 NA +3025 chr4 + 190214555 141791774 141791773 141791841 68 TGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTA chr4 + 94230402 79265520 79265519 79265587 79265520 79265519 79265587 68 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA ..:.........::........xx...:.:..::..:.::.:.::.:.:::.x.:....:.x....:. 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 62526254 NA +3074 chr4 + 190214555 141791775 141791774 141791860 86 GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTATGCATAGACTCCACCTAGA chr4 + 94230402 79265519 79265518 79265604 79265519 79265518 79265604 86 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAA .:...........::........xx...:...::...:.::.:.::.:.:::.x.:..x.....x.x::..xx:x...:.:x..:. 86M 53/86 61.6% 86/94230402 0.0% 0/86 0.0% 62526256 NA +3471 chr4 + 190214555 141791778 141791777 141791865 88 TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTATGCATAGACTCCACCTAGAAGACT chr4 + 94230402 85834541 85834540 85834628 85834541 85834540 85834628 88 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATT .....x.................:.xx.....x::...:....:..x...:..:.:.x..:x:.:::.:.x..x:x:...:.:::.:. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 55957237 NA +3088 chr4 + 190214555 141791782 141791781 141791850 69 TGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTATGCATAGAC chr4 + 94230402 85834541 85834540 85834609 85834541 85834540 85834609 69 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATAC .....x...................xx..:..x::...:....:..x...:x.x.x.x.:::..:.x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 55957241 NA +3230 chr4 + 190214555 141791784 141791783 141791847 64 TGTGTGTGTGTGTGTGTGTGTATGTATATATATATATATATATATATATCTTTGTCTATGCATA chr4 + 94230402 85834541 85834540 85834604 85834541 85834540 85834604 64 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA .....x...............:.:.xx..:..x::...:....:..x..x:x...:......:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 55957243 NA +3120 chr4 + 190214555 141884250 141884249 141884320 71 ATTTGCATGTGTGTAGATATATATATTGATATGTGTGTGTGTGTGTGTGTGTGTGTGTACGTATACATAAA chr4 + 94230402 27325491 27325490 27325561 27325491 27325490 27325561 71 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAA ..x:.:...xx....x.:.:x.:x.:.x.x..:...........:.........::....:....::x... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 114558759 75655796 +3113 chr4 + 190214555 141902242 141902241 141902336 95 ACACATATATATACAT--ATACACATATATAT--TGTATGTAGAGGTGTATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATAT chr4 + 94230402 13482496 13482495 13482594 13482496 13482495 13482594 99 ACACAGCTCTTTACATTGGTACACATATACGTGATGGATTGGGAATGCTATGTGTGTGTATGTATGTATAGTTGCGTATGTATGCATAGCTATACACAT .....xx.x.x.....--:..........::.--..x..xx:..:xxx...........:...:......xx.:::...:...::...xx....:.:.. 16M2I14M2I65M 66/95 69.5% 99/94230402 0.0% 4/95 4.2% 128419746 61794809 +3157 chr4 + 190214555 141902283 141902282 141902339 57 GTGTATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834542 85834541 85834598 85834542 85834541 85834598 57 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA ....x...................xx..:..x::...:....:..x...:..:.x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 56067741 NA +3117 chr4 + 190214555 141929628 141929627 141929698 71 GTAACTATCATTTTGAAACTCATTACAATGTTCTTTAGTATTTTCTTTTCTCTCTCTCTTTTTTTTTTTTT chr4 + 94230402 61527172 61527171 61527237 61527172 61527171 61527237 66 GTAGTAATCATTC-----CTCCATATAATGTTCTTTGTTTGTTTACCTCCTCTCTCTCTTTTTTTTTTTTT ...::x......:-----...xx..:..........:x.xx...x::.:...................... 13M5D53M 51/66 77.3% 66/94230402 0.0% 5/66 7.6% 80402456 NA +3066 chr4 + 190214555 141942099 141942098 141942171 73 ATATATATATACATACATATATATATATAAATATACATACATATATATATACATACATATATATATATATACA chr4 + 94230402 20811748 20811747 20811820 20811748 20811747 20811820 73 ACACAGAAAAACATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTACA .:.:.x.x.x.....xx..x..x.x...x........:.x.x.......:..xx.:......:.....:.... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 121130351 69084204 +3149 chr4 + 190214555 141948552 141948551 141948630 79 GTCTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATTCATATATATAAAGACCCT chr4 + 94230402 79265519 79265518 79265597 79265519 79265518 79265597 79 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCT ..x..........:........:xx.:......:...:.::.:.::.:.:::.x.:.....::.:.x:.:..x:x.:.. 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% 62683033 NA +3216 chr4 + 190214555 141956567 141956566 141956644 78 TTACATTTATTGAACTTTGAATATATATATATATGTATATATATGTCTGTGTGTATATATGTGTGTGTGTATATATAT chr4 + 94230402 7572233 7572232 7572310 7572233 7572232 7572310 78 TTACACTGATTAGTCTTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATAT .....:.x...::x...::.xx.:.....x.:....:...:.x.x..::.:x...x......:.:...:..x...... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 134384334 55830221 +3152 chr4 + 190214555 141956580 141956579 141956658 79 ACTTTGAATATATATATATATGTATATATATGTCTGTGTGTATATATGTGTGTGTGTATATATATGTGTATATATATGT chr4 + 94230402 65759963 65759962 65760036 65759963 65759962 65760036 74 ACTTTGGTCTTTCATATCTACTT-----TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGT ......:x:x.x:....x..:x.-----..x:.:....x....:..........::..:..:.x........:...... 23M5D51M 54/74 73.0% 74/94230402 0.0% 5/74 6.8% 76196617 NA +3455 chr4 + 190214555 141956607 141956606 141956712 106 ATATGTCTGTGTGTATATATGTGTGTGTGTATATATATGTGTATATATATGTGTGTGTGTATATGTATTTATGTATATATATGTGTGTGTATATATATATATATAT chr4 + 94230402 21109187 21109186 21109292 21109187 21109186 21109292 106 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATAT ..x..::.:.:::.:.:.:.x.x....x.::...x...:....:x:.:..:.::x:.....:x.:..:x......:x:..::x.x.........:.:...:x.... 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% 120847420 69367135 +3456 chr4 + 190214555 141956627 141956626 141956689 63 GTGTGTGTGTATATATATGTGTATATATATGTGTGTGTGTATATGTATTTATGTATATATATG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:...:...x:.......x.:....:...:......:....::.x.x....:..x.:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 55322698 NA +3300 chr4 + 190214555 141956684 141956683 141956734 51 TATATGTGTGTGTATATATATATATATATTTTTTCTCTTTTTCTTTTTTTT chr4 + 94230402 23522770 23522769 23522820 23522770 23522769 23522820 51 TACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTT ..::..........................::..:..:.x..:..:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 118433914 71780641 +9525 chr4 + 190214555 141964279 141964278 141964563 285 TATTATTTTCTTCATAATGATATTCAAACAAATACAATGTTAAAAAATAAATTGCAGGA---AACAGTGGGAAATAAAACTTACCAGGCAGAAGATCAAGAGGAATTAAGTCTCAAAGCTCTGGTCCACATGTCTAT-AAAATTGATTCGACTTAATAAGTTTGATGC-AAAGAGAGTTGTATTGTTTGGGATGTGCACACACACACACACACACACATCTTT---AACTGTCTGAGCACACCTTT----CTGCCATTCATTTAGAAT-TCCATGAATAAATAAATATAAATAGGTTG chr4 + 94230402 31206063 31206062 31206347 31206063 31206062 31206347 285 TAGTATTTTCTTTTTAATGATGTCCAAACAAATTATCTGTTGAAAA-TAGACTGCATGGTAGCACGGTGGGACATGGAATTTAGCAGGCACAAGATCAAAAAGAATTAAGTGCCAGAGCTCTGCTCTGTGTGCTCGTAAAAATTGATTTGACTCAATAAGTTTAATGCAAAAGGGAATTGCATT-------CTGTGCAC-----TGCTTTCCTGTTGATTTTTAGAAAGTGTGGGAGCATGTCTTCCCTGCTGACGTCCATTAACTATGTCCATGAATACATAAATATAAATTGAGTG ..x.........:x.......:.:.........xxxx....:....-..:.:....x.:---x..:......x..::..:...x......x........:.:.........x:..:.......x..::::..::::.-..........:....:.........:....-....:..:...:...-------x.......-----::.x:x.x:::xx..:...---..x...xx.....:::...:----...x.:.:....x.xx..-..........x............x.:x.. 46M1D12M3I75M1I30M1I15M7D8M5D19M3I20M4I18M1I29M 200/272 73.5% 285/94230402 0.0% 26/272 9.6% 110758216 79456339 +7655 chr4 + 190214555 142023112 142023111 142023310 199 GTGATGAAAATGGAAACAATGTATAATGGGGAGAAAAAGACAGAAACATAAAAAATAAAAATCA--TTTATTTAAACAAAAATATACACACAGTGTACAATGAATATGGTTTACACAGAACAATAAAACAAAAATGATATCTCTTAAATGCCAACATAAAATGAT---------CTATTTATGCCTAGAAAAAATTTCTAGGAATACACA chr4 + 94230402 31210430 31210429 31210621 31210430 31210429 31210621 192 GTCATGAGAATGAAAA--ATGAGTAACA-----AAAACGTCAGAAACATAAAAAATAAATATCACATTTATTTAAATAAAAGTATACACACAGTGTACAATGAGCATGGCTTACAGACAGCAATGAAACAAAAATGCTAAATCCTGA-----TGTATAAAAAGATTTGAATTGCTTAGTTGTGCTT------TATTTCTCTGAACACACA ..x....:....:...--...x:...::-----....x.x...................x....--..........:....:.....................::....:.....x.x.:....:...........x..xx..:.:.-----x::......x...---------:..x..:...:.------x......xx...:..... 16M2D10M5D31M2I81M5D13M9I12M6D18M 145/181 80.1% 192/94230402 0.0% 29/181 16.0% 110812682 79401873 +74916 chr4 + 190214555 142028751 142028750 142030430 1680 TGTGTTCCTGTTTATTAACATGTTGGTAAACTTAGGTGTCAGCTTTTCCATAAGTCCCCTCTGGAGGTCTGTAGTACTTGGGGAAAGCCATCAGCTGTAGCATGTTGAAAGCATACTTTCTGCATTTGATATTCTTCAGTACATTCTCTATGCGGCATCCTTCTCTGGTGAAAGGGG--AAAAAGTACAACTTCATGAAACACAGAATAAATAAATATGCTTTATTTGTTTAATGCAGAGTTGCAGCAACCATCCAAGTAAAAATAACAAAGATTCAACTCTACATTTTTTTTTTCCACAAGTGATGATACATCTTACAAAATTAAATCCTAGGCCAGGCCCAATACCATTATTGCCCTCTGAAAGAGATGA-------------CTTAAGTCTCTTTACTCTTAACATTTAAAATTTAAT-----AAACTCTTTAAATATAATTTGCTCCACAATACAGCTCCACTTTAGTTTCATAAATATATCTGCCTTTTTATAACATTTCCACAAATTAATTTCTCAGTCTCTTTAAAACACATTAAAATCTATATGTAGCCCTAAGGATGCAGGTTCTAGAAATAAGGCATTTAATTTATTAAGTCTGGCCCTATAGATTTTTAAAGAAAAATTTCATCTCTATTTTATTAT-------TTTAGCTGTGCAAGGAAGA---GAGAAAATGGCTTTCTGAACAGCCTGGGCCAAGTCTCAGCTTTATAAAGGAAGAGTGCTTGTCCACGGACAGTACAAAAGTCACAAGTGCTGGGAATGGTACATCAAGACACAAACAAGACCTTGTTAAAAAGAATAGAAAAGTCCTCTGAAAGCCAAATCAACCCAAACAAGAGATACAAACAGGT-AATTTAATTACAAAACATAAATAGCCATTCTCTCCATAAAGTTACTTGACAGAAAAGAGTTAATTGCAGCAAAGAAGTAA----------AACAGGTTAAAAAAAATTTCTATCAGCAGATGGCATCTATGATATTAGCACAGTGGAAATAAAGTCTGCAACCTCCCACATCTCTAGAACTTGTCTCAGGGTTTCAGTGT---TTGTGCAAATTTCAGTCTTAATTTCTTTAATAAATTTAGTGGGATGAGGACAGGAGGTTCAGAACTTCAAGCTTTCAGGATTCTGTTCTTTGTCTTATTCCAAAGACAGTAATTTAAA--AATTCTTCTTGAGCTAGTTAACAGTGGGAAACACCTTTCCATGAACA-AAAGAGCAAAATAATCCACCTAATGCATAGTACTTTTTGTTTTTTAGATTTTAGGAAAAACAAACTAAACA-----CAATTTA-ACATTT---TTTAAA------TTCTGTGAATTTGAAAATGTAAAAATATTACAGCATTGTCCCCATAATT-TAAAGTTCATTGTCATTTGTAGAAAAGAAAAAGGAATACAACATAAAACTTATTGGTATTTGGCTAAGAGTAACGCCAGACTTAAAATAAGCCACACAACTAGCAGGTGTGAGCTGACAAGCAGCAAGGCGACAGGATAGAAGTGTCGAGAAGTTGGCTTGTTATCAGTTAGACAGCCTGTTTCAGGATCATCGGATTCATTCAGTGCTCCCTGGGTTTGTCTGCTGTTAAATGAGGGGAAGTTGGGGGGGAAAAGAAAATAGTATAGAGTTCACACAGTAAAAAAAATTCAGCCTTAAATATTCTGAAATACAATGCATTATCTTACATAACACAACTCTTTCAGATGAAA chr4 + 94230402 31215236 31215235 31216912 31215236 31215235 31216912 1677 TATGTTCCTG---ATTACATTTTTGTTAAACTTAGGTGTCACTTTTTCCATATGTCCCTTCTGGAGGTCTGTAGTACTTTGGGAAAGCCATCAGCTGTATCATGTTGAATGCATACTTTCTGCATTTGACATTCTTCAGTACATTCTCTATGCGGCATCCTTCTCTAGTGAAAGGGGGGAAAAAGTACAACTTCATGAAACACAAGATAAATAAATATGCTTTATTTGTTCATTGCAGAGTTTCAGCAGCAGTTGAAGTAAAAATAACAAAGATTCAACTCTACATTTTTGTTTTCCACAAGTGATGATACATCTTACAAAATTAAATCTAAGGCCAGGCCCAGTACAGTTATTGCCCTCAGAAATAGGTGATAAGATTTTTCCCCCCTAATATATTTGCCCTTGAGGTTTAAAGTTTAGttaaaaaaaatagaaaataaaaaattaaataatGATACA-TTTCATTCTAATTCCAGAAATATATTTGCCTTTTAA--ACGTTAT----ACTTTTTTTTTCAGATTGTTTACTATATATGTGAGATTACAAGTTGCCATAAAAATGCGTATTCTAGGAATAAGGCATTT----TATTAAGTCTGGCCCTATAGATTTCTGATGGAAAGTTTCATCTCTGCATCATTTCCCCTATGTTCAGCTTTGCAATGAAAAAAAGAGAGAATGGCTTTTCAAACAGCCCAATCCAACTCTCTGCTTTATAAAGGAAGGATGTTTGTTCACATACAGTACAAAAGTCACAAGTGCCAA-AGTGGTGCATCAAGACATAAACCAGACTTCTTAAAAAAGAATATAAAAGAGTCTTCAAAGCAAATGCAACTAAAGCAACAATAACAATCAGGTTAATCTAACTACAAAACAGAACTTACTATATTCCACTTA--GTTACTTGACAGAAAAAGGTTAGTTGTAGCAAAGAAAGAATCATTTCTCCAACA------AATAAGATCCAATCAGCTAATAATATCAATGAAAATAACACAATGAAAGCAAGTCGTACAAACCACCGC-CCTGTAAAATTTGTCTGGGGGT--CAGTCTGTATTGTGCAAATC-CATTTTTAATTTTGTCAGACAAGTTACT---CTGGAAAAAGGGG---------TTCAAGCATTCAGGATTCCACATCTTTTGTATACACAGTGACAGCATTGTAAGTGGGCTTTCTTTGAGCTAATTA-CAGTGGGAAA-GCTTTACCATGAACAGAAAGAGCAAATCAATTCACTCAATGCATAGTA-----TACTTCTTAGAGTTCAGAAAAATTAATGAAAACATTGTACATTTCAGACATTTGTATTTGAAGATGATTCCTTAAGGTCTGAAATTGTAGAAATATTACAGCATAATTTATTTTTTTCTAAAGTAGTTTGTTGTTTGTAGAAAAGAAA--GGAACACAA-GTGCAGTTTATTGATATTTGGCTAATAGCAAAGCAAGACTTAAAATAAGCCACACAACCAGCAAGTGTGAGCTGACAAGCAGCAAGGCGACAGGATAGAAGTGTCGAGAAGTTGGCTTGTTATCAGTTAGACAGCCTGTTTCGGGATCATCCGAGTCATTCAGTGCTCCCTGGGTTTGTCTGCTGTTAAAT-AGGGGAAGTTAGG-------AACAAATAGAACAGCATTTAAACAGCAAAGAAAGCCAACATGTAGGCATTTTGACA-ACAAAGCG--AAACTACATAGC------CATTCTGATGAAA .:........---....xxx.x...x...............x:.........x.....:....................x...................x.........x...................:....................................:..........--.........................::........................:.x.........x.....:.x:.:x...................................x......................................:x............:...x:...........x....x..:...-------------.::x.:.x.x...:.:...:.x:......:....:.-----...x.xxxx..xx.x..x..:xx:x.::.....-:.:..:.:..:..:..x........:........x.--..:..x:----.x..xx...:....x:.x....xx.:.:..xx:.:x:..:.x..x...x...::....:x:......:............----........................:.:.x.:...:..........::x.:...x:-------..:....x.....x...:.---....:.........:::.......:::x....x....x...............::..:....:...:x......................:::-.:....:..........:....x....:.:x.x..........x.....xx:::.x.....x..xx....:x..:...x.:xx....x.....-...:...:.........x..x.x:.:..x:..:x.x..--................::....:...:.........:x..----------....------..x..:x.:.x......x:..:::...x....x.x..:....:..:..::..:x:x.:...x.:x..:.-:..x..:..:......x:....--....x.---..........:-..x.:.......:x.:.:xx..x...x.---x..:::.x...:.---------.......x..........:::x::..x.x.xxx:x..:x.....:.x.x...:--:::.:.::........:...-..........-:.:..x.........-..........x:...:...::...........-----.::..:.....x..:..:....x:..xxx.....-----..x..:.-......---...:..------.:..xx:::.:.....x....:..............x:.::x:x.xx..-......xxx....::...............--....:....-:.:x.::......:...........x..:..x..x.......................:....:..............................................................................:........x..x....................................-..........:..-------.:x......x.:..x:..:.x....:...:...:::x.xx:x..:::...:...x.-....x..:--.xx:......:.------.x...x....... 10M3D164M2I193M13I36M5I33M1D36M2D7M4D80M4D55M7I19M3I93M1D93M1I38M2D40M10I4M6D69M1D22M2D6M3I11M1D28M3D13M9D53M2I20M1D10M1D15M1I32M5D34M5I7M1I6M3I6M6I49M1I30M2D9M1D191M1D13M7D56M1D8M2D12M6D13M 1263/1614 78.3% 1677/94230402 0.0% 129/1614 8.0% 110813515 79401040 +9957 chr4 + 190214555 142054301 142054300 142054522 222 GAAACACCACTACTGTATCTGAACACTTTTATGTGCATGTATGAGATAATCGCTGCTGCAAGTTCAAGTTCATTACAGCCTCATTTCAAGTTCCACCTGGGAATTAAACTTAAATTGAGACTGAAATGGGTTTTGTTATCCTTATTGTGCTGCTTAGAAAAAGATGCTTCATGGTGATAGGGAGAATGATTGCCATTGGAGCTGAAAACAGCATTTCAGATA chr4 + 94230402 31229957 31229956 31230171 31229957 31229956 31230171 215 GAAATACCTGTACAGTGTCTGCGCACAGT-ATAAGCATGCAGGAGAGAATCAA------AATGTTGACTTCATTATCACCTAATTTCAAGTTTTACCTTGGAATTAAACTTAAATCGAGACTGAAATGAATTTTGTTATCCCAATTGTGCTGCACAGACAATGATTCCTTCTGACAGCAGAAAGAATGATTGCCTTTGGGAATGAGAACAGAATTTCATGTA ....:...xx...x..:....x:...xx.-..:x.....:.x....x....:x------..xx.::.x.......:x:...x..........::....x................:............::...........:x..........x:...x..x...x.:.:x..:::::..::............x....::x...:.....x......x:.. 29M1D23M6D163M 159/215 74.0% 215/94230402 0.0% 7/215 3.3% 110824344 79390211 +3800 chr4 + 190214555 142061832 142061831 142061913 82 ATGCATATATGTACATATATACATATATATATGTACACACACACACACACACACATATATA---TATATATATATATATATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ...::.:....:...:.:..x:..:x.:.............:...........x:x.x.x.---..:..:x...x.......... 61M3I21M 61/82 74.4% 85/94230402 0.0% 3/82 3.7% 118814110 71400445 +3105 chr4 + 190214555 142061840 142061839 142061900 61 ATGTACATATATACATATATATATGTACACACACACACACACACACATATATATATATATA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...x.:....x.::......:...:...:...::.....x....x...:....x:..:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 80791065 NA +3345 chr4 + 190214555 142061857 142061856 142061905 49 TATATATGTACACACACACACACACACACATATATATATATATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ........x.:..................x....xx........::... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 52237925 NA +3662 chr4 + 190214555 142062605 142062604 142062678 74 GCGCACCTGTAGTCCCAGCTACTTGGGGGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...........:::.......x.xx.x...x..........::.:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 66029401 NA +12372 chr4 + 190214555 142081998 142081997 142082199 202 AAAAGAAAAAAACTTGAAAAACATGTGAGATACCTTCTCATGCAATCCAGCGCTCGGATAAAGAAGTCCTTGTGTAACTGGTGCTCATCTCTCAAGATTGAGCATTGTTCAAGTGTCACTGACATCGATGTCCTGTCTTTGGCACTTTTACAACAGGTGAAACGAATACCATTCAGTTTGCGGCAAATCTGTAACATATGTA chr4 + 94230402 31240504 31240503 31240705 31240504 31240503 31240705 202 AAAAGCAGGGGATATGCAATAATCTTCACATACCTTCTCATACAATCCAGTGCCCGAATAAAGAAGTCCTTGTGAAGCTGATGCTCGTCCCTCAAGATGGAGCACTGTTCCAATGTCACTGACATGGATGTCCGGTCTTTGGCACTTTTGCAGCAGGTGAAGCGGACTCCATTCAGCTTACGGCAAATCTGAAACACAGGCA .....x.::::.:x..x..x.xx:x.x.x............:........:..:..:.................x.:...:.....:..:........x.....:.....x.:............x.......x...............:..:........:..:.:x........:..:...........x....:.x.:. 202M 160/202 79.2% 202/94230402 0.0% 0/202 0.0% 110841494 79373061 +9720 chr4 + 190214555 142086133 142086132 142086287 155 AGAGTGCTTACCGTTGCAGCCAGCCACATAATTTCTACATTCTTTCTTTTTTTGGATTGGATATTTTGAAGGAGATTTTCTAGCAATGCTTTTAAATCATTTTGTTCCTGAAAATGTGAAATATCTGAAGGGGAAAAAACAAAGGAGAAAAATAA chr4 + 94230402 31245706 31245705 31245855 31245706 31245705 31245855 150 aaaGATCTCACCGTTGCAGCCAGCCACATGATTTCTACATTCTTCCTCTTTTTGGCCTGGATACTTTGATGAAGACTTTCTAGTAATCCCTTTAAATCATTTTGTTCTTGAAAATGTGGTAGACCTGA-----AAAAAATAAATGAGAAAAAAAA .:..xx..:....................:..............:..:.......x:......:.....x.:...:.......:...x.:.................:..........:x.x.:....-----......:...x........x.. 128M5D22M 126/150 84.0% 150/94230402 0.0% 5/150 3.3% 110840427 79374128 +3252 chr4 + 190214555 142098327 142098326 142098381 55 TTATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAAAAACTAACAACA chr4 + 94230402 62856649 62856648 62856703 62856649 62856648 62856703 55 TTTCTCTTAAAAGAAACAAACAATGACAACAACAACAAGAAAAAAAACAGTAATA ..x:...x....x..........::.............:.......x:.::..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 79241678 NA +3331 chr4 + 190214555 142098327 142098326 142098369 43 TTATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAA chr4 + 94230402 24125108 24125107 24125150 24125108 24125107 24125150 43 TCATTTGGAAAACAAACAAACAACAACAACAACAAAAAAAAAA .:...:x............................x....... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 117973219 72241336 +3103 chr4 + 190214555 142098333 142098332 142098369 37 TGAAAACAAACAAACAACAACAACAACAACAAAAAAA chr4 + 94230402 89310884 89310883 89310920 89310884 89310883 89310920 37 TAAAAACAAACAAACAAAAACAACAACAACAAAAAAA .:...............x................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 52787449 NA +7881 chr4 + 190214555 142108085 142108084 142108208 124 ATACTTACAATCAGGAGGCATCTTTTCCATAAATATCTTGTAATATTCTTGTAGAAGTTCGAAGTTTTCCTGATTAATACTTTCTTGCAAAGAGACATCTCCAAACCTACAA----ACAGAAAAAAGA chr4 + 94230402 31249991 31249990 31250118 31249991 31249990 31250118 128 ATACTCACAATCAGGAGGCATTTTTTCCGTAAACAGGTTGTAATATTCCTTTAGAAGTTGTAAGTTTTCTTGGTTAATGTTTTCTTGCAAAGTGGTATCTCCAAACCTATAAAATCACAGTAAAATGA .....:...............:......:....:.xx...........:.x........xx........:..:.....::............x.::.............:..----....x....x.. 112M4I12M 104/124 83.9% 128/94230402 0.0% 4/124 3.2% 110858094 79356461 +10641 chr4 + 190214555 142112496 142112495 142112736 241 AGGAACAAAGAAAAATCT-----CAAGTGCGACTCTTACACCAAAGCTTACCTTTCAGCCAGAGTTTGCTGTTCATTGATTCCAACATTAAAAAGTACTGGATACACATGAAGCAACTGTCCTTCTTTAATCTGTAGAGGTAGTGACTCAAACATTCTGGCTGGAAGCTTGACCTCTACCACGTAATGTTCTCTAAAGAAGGCA----GAGGACAAAGGGAAGAAACATTACTTA-TTTGTTTTGTGTTAT chr4 + 94230402 31253145 31253144 31253382 31253145 31253144 31253382 238 AGAAAATAAGAAAAATATTTTGGCAAGTG----TCTT---------CTTACCTGTCTGCAAGTGTTTGCTGTTCATTGATTCCAACATTAAAGAGTACTGGATACATGCGAAGTAGCTTTCCTTCTTTAATCTCTTGTGGTAGCAACTCGAACATCTTTGCCGGAAGCTGGACCTCTATGACATAATGTTCACTAGGAAAAATAAAAGGAAGAGTAAGAATAGGAATTTTGCTTAGTTTGTTTGAAATTAT ..:..xx.........x.-----......----....---------.......x..x..x..x.............................:.............:::....:.:..x..............x.x.x.....::....:.....::.x..:.......x........:x..:........x...:::..:::.----..:..xx...::x..:..:x..:....-.......x:x:.... 18M5I6M4D4M9D158M4I27M1I15M 178/228 78.1% 238/94230402 0.0% 23/228 10.1% 110859351 79355204 +3537 chr4 + 190214555 142119806 142119805 142119855 50 CACACACACACACACACACATACACATATATATACATATATACGTATATA chr4 + 94230402 74526077 74526076 74526126 74526077 74526076 74526126 50 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..............::x.........x........:......:....x.. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 67593729 NA +3110 chr4 + 190214555 142119833 142119832 142119913 81 ATATATACATATATACGTATATATGAGTTCTATATATATATACATATATACGTATATATACGTGTGTATATATATGTATAT chr4 + 94230402 32744950 32744949 32745030 32744950 32744949 32745030 81 ATGTACACCTATCTATCTATACATCTACAGAATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT ..:..:..x...x..:x....:..xx::xxx.....x...:.:.:...:..::.x:.:.:.:.....:...:......... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 109374883 80839672 +11159 chr4 + 190214555 142121494 142121493 142121883 390 GACCTCTGATTGAGACAACTTACTATAAGATGTACCTCTTCTATTGGAGGTCTGTTCTACACACCATCATTTTTCTTAATTATTTCTGACATTTTGCCTATCATACACTGACCTTCGAAGCTATTTATTGAAAACCCTTCTCGGAAATCTCATAGTCTGAGAGTGAATTGTCAAAAATAATTAAGAAAAATGGTGGTATATTCCCCTGACACAGAAATATATCTTTTCTAAAATGTTGCTGCTTTTAACTGAATTTAATTTAAAGTCATTTCAAGAATTATGAGTCTATTAACTGAACAACTCCCGCAAAAGTAAAAACACCCAGAGCTTTGGATGAG-ATAGTAATAAGGAGAAAAAT----GTTCTCATGCAGGCTATTATTTTGAATTTCTT chr4 + 94230402 31256924 31256923 31257307 31256924 31256923 31257307 384 GATGTTTGACTGGTGTGATTTACAA-AGGATGAATTTCTTCT-------GCCTTATCTGTACATCATAATTACTCTCAATTATTCCCGATGTGTTGCCTATCATACTCTGGCCTTCCTA-CTATTTATTTTGATCACTTCTGGGTAGGCCCACAGGATAAGAATTAATCATCTAGAATAATTAAGTAAATCAGTTGTGAGAGCCTCCTTCAGAGGAA-GCACTGTTTCTAAAA-GTGGATGCTTTTAGCTGAATTCAATTTACTGTTGGCTTAAGAATAATGATACTATTAAGGAAGTGATTTTGGCAAAAGTAAAAACATTTGGAGCTTCAGCCTAGAATAATACTGGAGATTAAAATCCCATTCCTCATGTGTAACCATATTTTTAACCCTTT ..:x.:...:..:x:::.:....x.-.:....x.::......-------.:..xx...::...:...x...x:...:.......:.:..::.x.............x...:.....xx.-.........xx:.x.x.....x..x.:x.:..:..xx.:...:.x...::..x.:..........x...x::..x..:x:xx..:.:xx..x..:..-::.::x.........-..x.x........:.......:......xx..::x:.:......x....xx.......xx:.:::.:.::x...............::::......::.x:x..-...:..x.:::..xx.....----x.:......::x:x:xx......x..::::.. 25M1D16M7D70M1D97M1D15M1D104M1I20M4I32M 249/379 65.7% 384/94230402 0.0% 16/379 4.2% 110864570 79349985 +7060 chr4 + 190214555 142122104 142122103 142122270 167 CTTCAGGAAGTGAG-CACTGCTTACCGTCTTCCTGTTATAACTGGCAACACATCATTGGATTTGGCTTCAATTATTTTAAATGCAACTTTCTTTAAATCGGAAATGCCAACGGCCATGTCCTCTAGCATTCCAATTTCATCGCCT------AAACAATAGAAAAGGCACTTAGC chr4 + 94230402 31257930 31257929 31258103 31257930 31257929 31258103 174 CTCCAGGAAACAAAACAAATCTTACCGCCTTCCAGTTATAATAGGCAAAAAGTCTTCTGATTTGGCTTCAATGACTTTAAACATTACTTTCTGCAAATCTGAAATTCCCACAGCCATGTCTTCGAGCATCCCTGCTTCTTCACCTATATGGAAAGATTACAGAAGTTATTTAAC ..:......:::.:-..xxx.......:.....x.......:x.....x.x:..x.:x..............x.:......:::x.......x:.....x.....x..x..:........:..x.....:..x::...x..:...------...x.x..x.:...x:.:...:. 14M1I130M6I23M 121/167 72.5% 174/94230402 0.0% 7/167 4.2% 110864174 79350381 +8599 chr4 + 190214555 142123223 142123222 142123429 207 AAAAATTTCTGGATTAAATGTCCTTCTGAATAGAAATGTGATTTTAACTTGTACTAAAGCAATACTCACTGTATGTACTTAGCAGTCCTTCATATTGTACTATCAACCCCACTGTGTGAAGCTGCTGTAGGAAGCCTGGGTCATACAGACTTGTCTGTAATTTGATGATAAAACCACAAACCAATCCAGCAAGCTGAAAAAAAAATA chr4 + 94230402 31259041 31259040 31259242 31259041 31259040 31259242 202 AGAAACTCCTGGGTAAACATCTGGTCTGCATTCATAAGGAATTTT-----GTCCAAGAACTCTACTTACTATATGTGCTTAGGAGTCCTTCATATTGCACAAGTAATCCAACAGTATGAAGCTGTTGTAAAAATCCTTGATCATGTAAACCCGTGTGCAGCTTGATTATAAACCCACAGACCAATCCAGCAAGCTATAAAGATAATA .:...:.:....:.x..xxx::xx....x..xx.x.x.x:.....-----..x.x.:.:.xx....:...:.....:.....x..............:..x.x:..:..x..x..:........:....::..x...x.:....::.:..::..x..:.::.....x.....x.....:................:x...:.x.... 45M5D157M 143/202 70.8% 202/94230402 0.0% 5/202 2.5% 110864182 79350373 +11215 chr4 + 190214555 142124582 142124581 142124770 189 ACCTACTGCTTGGCTGAAGACGATGTCTCTTCTTAGCGTCAGCATCAGACACTGGGGCAAGCTGTACGCAAGTTCCTGAAGGAGCACAAATGTCAGGGACTGCTTGGCTCGGTTCACCACTTCTCCCATGCAGTCCTTCAGGGTAAGGATGAGGGGATACAACTGTTCATACCAGTCCTCTGGGGGAAG chr4 + 94230402 31260219 31260218 31260407 31260219 31260218 31260407 189 ACCTACTGCTTGACTAAAGACAATGTCTCTCCTTAGGGTCAGCATCAAACATTGTGGCAAACCACAGGCAAGTTCCTGGAGCAAAACAAACGCCATGGACTGCTTTGCCCTAGTGACCACCTCTCCCATGCAATCCTTCAGCGTAATCACCAGGGGATAAAGCTGCTCATACCAGTCACCTAGAACAAG ............:..:.....:........:.....x..........:...:..x.....:.:::.x...........:..x.:x.....:.:..x.........x..:.x:x.x.....:...........:........x....xx.:x........x.:...:...........x:..:.::x... 189M 147/189 77.8% 189/94230402 0.0% 0/189 0.0% 110864363 79350192 +3213 chr4 + 190214555 142128199 142128198 142128275 77 TATATATATGTGTGTGTGTGTGTGTATGTATATACACATATATATACGTGTGTGCACACACACATACACACAATCTT chr4 + 94230402 21109194 21109193 21109270 21109194 21109193 21109270 77 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTT ....:..:.....x.x....x.:....x.....::..x:.:......x:....:.x:.:..::..::..x..xx... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 121019005 69195550 +3170 chr4 + 190214555 142128219 142128218 142128271 53 TGTGTATGTATATACACATATATATACGTGTGTGCACACACACATACACACAA chr4 + 94230402 23247723 23247722 23247775 23247723 23247722 23247775 53 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAA .....:.:.::.:......x...:x..:.:...:......:...:........ 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 118880496 71334059 +11381 chr4 + 190214555 142145669 142145668 142146030 362 TGCAATTTGATAAAT-AGCCTTCCATCATC-CAAGCCAGAGCAGTGGAAAAGCATGCTATCAGCACTCTCATCAAAGATACTATTGACTCCTCTTCTTCTATATCATTTTTTTTTCACGAGTTTCTCATTT-TGTTTACTC-AGTAAATGATT-------------GGGAAAAAAAATTA-----------------------TTTCTTACCTCTTGGGTGAGAGGGAATGGCATCTGTTAATGAAGGTTCCTTTTCTCCATCATTGTTGCCGCCACTGCCTTCACTGCCACCATCTCTTTCAATCAGTTTGTCCACCATAGCAATAATGCAGTTCAGGCTCTTCCCCACATTGGCCCACACCCTGTCCTGAAAAAAGCATG--AGTATCACTACATATTTTTG chr4 + 94230402 31269270 31269269 31269644 31269270 31269269 31269644 375 TGCAATTTGATAAACCAGACTACCACCACAGAAAGCTATGACTATGCAAATCTTTTCTATTGGCACTCTCA---AAGATGCTATTGACTCCTTT------ATCTCATTTTTCTGTTGCT--TTTTCCATTTGTATTTACACTAGTCAATGGTTATTTAAAAAAAAAGGAAAAAAAAACCAACAACAAAAATCACACCAAATGGTTGCTTACTGCCTGCATGCT------TGCAATCTGCTGTTGAAGGGTCAGTTTCACCTTCTTTAGTGTTGCCGCTGTT------------GTCTTTTTCAAGCAGTTTGTCCACCATGGCAATAACACAGTTTAAACTCTTCCCCACATTGGCCCACACCCTGTCCTGGAAAGAGCATAGTATTATCACTGCACATTACTG ..............:-..x..x...:..:x-x....:.x::.x:..x...xx:x.x....::.........---.....:............:.------..x........:.x.::.x--...::.....-.:.....x.-...x....:..-------------..:........::.-----------------------..x.....:x.:..x:..xx------..xx.....:.:x......x..xx....x..x..x..:x..::...:...::------------:...:......x...............:.......::.....:.::................................:...:.....:--.x.......:..:...x:.. 15M1I14M1I40M3D20M6D19M2D10M1I9M1I11M13I14M23I20M6D52M12D89M2I20M 252/333 75.7% 375/94230402 0.0% 71/333 21.3% 110876399 79338156 +10632 chr4 + 190214555 142160352 142160351 142160572 221 ACTTACCCACTCTTCCTCATCATAGTCTGAATGATGTGGTATGGAGTCCTGCCCTCTCATCACTGGGGGTTGGTCTTGGGG---------ACTGCTCTCCTCTGTGCTGCTCTTAGGAGAGGGTGGCTTCTTAAGAATGCCTCCTGGCCTTGCAGTGTAGAGTGCTAAAAGAGCACTCCTGACAAGTTGATCCTTGAAGGCATGTACAAAAAGCTCTGTCTGGAAAGAAA chr4 + 94230402 31275015 31275014 31275244 31275015 31275014 31275244 230 ACTTACCCACTCTTCCTCATCATACTCAGAATGATGGGGTATAGAGTCCTGTCTTTTAACCTGAGATGGATGATCCTGATGCTTTAGGTCATCCCCCTCTTCTGCACTGTTTCTAGGCACAGCTGGTTTCTTGAGGACACAGCCAGGTCGGGCTGTATATAGTGCTAAAAGGGCACTTCTGACCAGCTGATCCTTAAATGCATGCACAAACAACTCTGTCTAGAGATAAA ........................x..x........x.....:........:.:.:.x.:.xxx.:x..x..:..:..:x.---------.::x.:...:....::...:.::....x:x:.x...:.....:..:.::.xx..x..:.xx..x..:..x...........:.....:.....x..:........:..x.....:.....x.:........:..:.x... 81M9I140M 161/221 72.9% 230/94230402 0.0% 9/221 4.1% 110885337 79329218 +3013 chr4 + 190214555 142168265 142168264 142168320 56 TGCTTCCCTCTCTCCCTTTTTTGTCATTTCTGTTTATATTCCTTGATTTTTCTTCT chr4 + 94230402 32361917 32361916 32361972 32361917 32361916 32361972 56 TGTCTCTCTTTCCCCATTTTCTACCATTTCTCTTTATCTTCTTTGATTCTTTTACT ..::..:..:..:..x....:.::.......x.....x...:......:..:.x.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 109806348 80408207 +4079 chr4 + 190214555 142171846 142171845 142171957 112 CAAAATCACTGCAGCAAGTTGTAAATGATGTATGAAATGACAAATCCCTGCCCAGTGC-ACAAGAAGAATATAAATACTGCTCTGTAATCACTGCAGTGGTGTGCTATTCGCT chr4 + 94230402 10342969 10342968 10343076 10342969 10342968 10343076 108 CATAGCCACTGCAGCAAATTATAAATGATGCATGAAATGAAAAATTCCTGC----TGCAATGAGAAGTGAATAGACAGCTCCCTGGAATCAACGT-TTGCCGTGTTACCCACT ..x.::...........:..:.........:.........x....:.....----...-.::.....x:x...:.:.x:x.:...x.....x:.:-x..x:...:..::.:.. 51M4D3M1I36M1D17M 77/107 72.0% 108/94230402 0.0% 6/107 5.6% 131828877 58385678 +6244 chr4 + 190214555 142171849 142171848 142171991 143 AATCACTGCAGCAAGTTGTAAATGATGTATGAAATGACAAATCCCTGCCCAGT--GCACAAGAAGAAT--ATAAATACTGCTCTGTAATCACTGCAGTGGTGTGCTATTCGCTAAAATTTTCAGCTTAGGTGAACCCAGAAAAACCT chr4 + 94230402 10283608 10283607 10283754 10283608 10283607 10283754 147 AATCATTGCAGCGAGTTGTGAATGATGTATGAAATGAGAAATCCCTGCCCACCCAGCGGAAAAAGAATTCACAGACAGTGCTTTGCAATCACTTCTGTACTCTGCTGTTTGAAGTAGCATTTAGCCAAGCCACAGCCACAAAAACCT .....:......:......:.................x.............x:--..:x..:......--.:.:.:.x....:..:.......x.x..:x.x....:..:.xx:x.::x..:...:x..x::x.x...x........ 53M2I13M2I77M 105/143 73.4% 147/94230402 0.0% 4/143 2.8% 131888241 58326314 +3319 chr4 + 190214555 142171851 142171850 142171897 47 TCACTGCAGCAAGTTGTAAATGATGTATGAAATGACAAATCCCTGCC chr4 + 94230402 5437095 5437094 5437141 5437095 5437094 5437141 47 TCACTGCAGCTACTTGTAAATGATGTATGAAAAGAAAAATTTCTGCC ..........x.x...................x..x....::..... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 136734756 53479799 +18763 chr4 + 190214555 142173476 142173475 142173831 356 TTCATTTTGATCCTGTGGCAATACTT-TGAAGCTTACTTTTTAACCTACTCTATTTTACATTTCCAGATGCTATGAATGGCGATGTATGC-------AGAAAGCCAGACCAATGGGAATTTGAGTATTTCATTTTCCCAACTATAGTGATGATTTGGATCTTACTTTTTCTGAAAGCATCTTTAAAGAATTCTTCAAGCTGTCTGGAGAATGCTGGCTTGCAGAATTAAGCAGTAGGTCTGCATGGGTTGCTATAAGAGGTTGTAGTTGATTGATGTTGCTGAGAACTTCCTTTGCTTTGGCTGTGTTTTCAGGTGAATAGTAAATAAACTGGTATCCGGTACTGCAAC--AACAAAGATAAAAAT chr4 + 94230402 31280914 31280913 31281247 31280914 31280913 31281247 334 TTTTTTTTGAT-----GGCAACATTTATGAAGCTTATTTT-------------------------AAATGCTGTGAAAGACAATTTATGCCAGAAAAAAAAACCCCAGCAGCTACAGACTTGGTTATTCCATTTTCC--ACTGCAGAAAAGATTTGAATCTTACTTTTTCTGAAAGCATCTTTAAAGAGTTCTTCAAGCTGTCCGGAGAATGTTGGCTTGCAGAATTAAGCAGAAGGTCTGCATGGCTTGATATGAGAGGTTGTAGATGATTGATGTTGCTGAGAACTTCTTTTGCCTTAGCTGTGTTCTCGGGTGAATAGTAAATACACTGGTATCCAGTACTGTAACAAAACAAAGATGCACAT ..:x.......-----.....:.:..-.........:...-------------------------.:.....:....x.:.:..x.....-------.:...x..x::.x:x.:x::.:...:x....:........--...::..x:.x......:...............................:..............:........:....................x............x...x...:...........x.......................:.....:..:........:..:...............x..........:......:...--.........:x.x.. 11M5D10M1I13M25D25M7I40M2D210M2I15M 272/324 84.0% 334/94230402 0.0% 42/324 13.0% 110892562 79321993 +3291 chr4 + 190214555 142179343 142179342 142179415 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATTGCTTGAACTCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x:xx.x...x::.......:.:.:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 66146138 NA +3346 chr4 + 190214555 142182419 142182418 142182477 59 GTGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAACTGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x......:............:........x.xx.x...x::.........:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 66149213 NA +3547 chr4 + 190214555 142186296 142186295 142186354 59 GGTAAGCACTATTATTTCCACTTTACAGATGAGGAAACTAAGGTACAGAAAGGTGTGGT chr4 + 94230402 28016191 28016190 28016249 28016191 28016190 28016249 59 GGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGT ........x.......:...:..........::....:::x.:......:...:x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 114170105 76044450 +3567 chr4 + 190214555 142190137 142190136 142190222 86 TAGTTCCCAAAAAACCTGGTCTAAAAGACTTGGCTATCTGGGTTTTTTATTTGTTTGTTTGTTTATTTTTGTTTTTTTTTTTTTGG chr4 + 94230402 28945983 28945982 28946055 28945983 28945982 28946055 73 TAATTTTCAAGAGATCTTGTTAAGA-------------TGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTTGG ..:..::...:.:.:..x..:x.:.-------------..........:..............x:x:...x............... 25M13D48M 57/73 78.1% 73/94230402 0.0% 13/73 17.8% 113244154 76970401 +17553 chr4 + 190214555 142193080 142193079 142193563 484 TACTTACTTTCTTCTTTCTGTTTCAAATCTATGGAGTAGCTTCCGAAGACCACCATTCTTAAATCCCTGAAAATGGGCAGCTGGGGCTCCCACAGTGATGACATCGTAGAGAGCATCTGGAGTAGAAACAGACAAG--GAGATGAACACTTTGCAAACATTTATCTCCGTCATGCTGTTTGCATTGAAGC---ATACCTATTGTAGGAAGTATGA--GAAATTATTCTGTTTAATTTTTTAGGAATAACTATGAACTCACATCTCAAGGGGGAAAGAGGAGCTAATAATCAATCTTTCTA-AAAGCCACCTGTGCACCTAAACAAGATATAATGTTTTCCTGATTTATGACTACATCTTAATTACATGCTACAGTGTAGAACAGTGTGTTCTCTCATTATTCTATATACTTACTGAGATAACATGTTAATTGCTCTTTTGTGTATTTTACTTCATTGAGTTTTGCATCATTTAATTTGCAATCATGTTGAAA chr4 + 94230402 31289887 31289886 31290340 31289887 31289886 31290340 454 TACTTACTTTCTTCTTTCCGTCTCAAATTTACTCAGCAGTTTTCGGAGACCACCATTCTTAAATCCCTGGAAATGTGCTGCCGGGGCTCCCACAGTGATTACATCATACAGAGCATCTGGAACAAGAAGAGACAAGCAGAGAT-----TTGTGTGAACCT-----------ATGCCCAAAGCATGGCAACACTACATCTACTCTACAATACATGAAGAGAATAAGTATATT--ATTTTCAAGGAATAATCAAGAATCTGTGTCTC-AGGAAGTCCCAGGAGC---TAATCAATCTTTCTGCACAGCCACCTGCACACAT--------TAGAAAGTTTACCTGATTTATTACTATGTCTAAATTATATGCCACAACATAGAAAAATA----CTCTAGTTCTGCAGT----TTACAGAGCTACAAAGTAAATTGGTCCTTTGCGTATTTCACTTCATTACATCTTCCATTATTTAAATTGCAGTCATGTTGAAA ..................:..:......:..:xx..:..:..:..:.......................:.....x..x..:.................x.....:..x............::.::..x.......--.....-----:.x..::...x.-----------....:xxxx....x.x.:.---.:.:...:.x..x:.x::....--::...x.x.x.:..--.....:x........::.x...::::::....-...::.xxxx......---..............:-.x.........::...x.--------..x..x....x..........x....::...x.....:....:...:::.....x.:.:----....x:..x.x.x:.----....x...x..xx.x..x.....x..:....:......:........:x:.:..x...:......x.....:........... 136M2I5M5D12M11D19M3I22M2I14M2D32M1D16M3D15M1I18M8D59M4D15M4D83M 335/446 75.1% 454/94230402 0.0% 46/446 10.3% 110903193 79311362 +8259 chr4 + 190214555 142208373 142208372 142208551 179 AAGTACACACTGTAACATAATTTGCTATTTTTAAAAGAATAATTTATGATACCTTTCAAGTGAGGGCTGTGTACCTGCATTCTTTGCAGATGTAGATTTATTGGAACAAATTCTAATGTTTTCTCTCCTTTGCTGCTGCTTGATTTGAAAGAGGACCCTGATGGAAACCAGAAATTAAA chr4 + 94230402 31297479 31297478 31297650 31297479 31297478 31297650 172 AAGTATACTTTGT--CATACTTAGGGATTTCTCTGCGAACTATGCTT--TACCTTTCAATAGAGGACTGTGCACATGCATTCTCTGCAGATGGAGATTTATTGGGATGAATTCTAATGTTTTTTCTCCTTTGCTACAGCTTGACTTGAAGGAAGAACCTGA---AAAAAAGAAGTTTAA .....:..x:...--....x..x.xx....:.xx:x...:x..x:x.--..........xx....:.....:..x........:........x...........:.::..............:...........:.x......:.....:..:..x.....---...xx....:..x.. 13M2D32M2D112M3D15M 134/172 77.9% 172/94230402 0.0% 7/172 4.1% 110910894 79303661 +8218 chr4 + 190214555 142208880 142208879 142209087 208 GAAATTGCTTCCACACCTGTTTCCTTGCTAAGTTCTGTCAGAATGTCTTGGTACATATTCACCATTTGATCACAGTGAGTAAGGACATTTTTTCGCAGATTGTCCCAATGTGGAGAAAGCTCACCAAGTTCTTTTATCTCCTGGTTTCTGTTAAGAGTGGAAGAGAAGAGAAACTTTATTTTTATCTTAAATCCATAAACGCATAACC chr4 + 94230402 31302829 31302828 31303032 31302829 31302828 31303032 204 GAGGCTACTTTCATACCTGTATGCTTTCCAAGCTCTGCGAGAGTATCCTGATACATGCTCAACATCTGATCACAGTGAGCAATAACACTTTTACGCATATTGTCCCAGTGAGGTGCAAGTTCCCCCAAGTCTTTAAGTTCCTGATTCCTGT----ATCAAAAGGCAAAAAGAGATGGATTTAAGTCCTTAATCCGTTAACACTCATCC ..:::.:...:..:......x.x...x.:...:....:x...:.:..:..:.....::...x...:.............:..x:...:....x....x.........:..x..x.x...:..x..x.:x.....x.x:.....:..:....----.x:::...:x..:.::.:x.xx....xx:..:.x.....:.x...:.x:.x.. 151M4D53M 139/204 68.1% 204/94230402 0.0% 4/204 2.0% 110906051 79308504 +3229 chr4 + 190214555 142215871 142215870 142215961 91 CAACAGACCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATCTGACACTAATGTTGTAATT chr4 + 94230402 3859052 3859051 3859140 3859052 3859051 3859140 89 CAACATACTGAG--CACGTTTGAATTAAAACAAGAAGGAAGGGAAAAAAAAAAAAAAGAAAAAGGATGAGCATCACATTGCAGTTGTGATT .....x..::..--:x:..:.x..xx....x..:..::..:::..............:......:.x..::x.x...:.:xx.....:... 12M2D77M 60/89 67.4% 89/94230402 0.0% 2/89 2.2% 138356819 51857736 +3379 chr4 + 190214555 142227718 142227717 142227800 83 CATGGTGGTGGGCACCTGTAATCCCAGCTAGCTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:.......x:..::........x.xx.x...x::...........:..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 66194521 NA +3265 chr4 + 190214555 142227855 142227854 142227925 71 CTAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAATTAAACAGTATGTTTCAAGAAAAACTAAATAGAAAA chr4 + 94230402 5978986 5978985 5979056 5978986 5978985 5979056 71 CTAAACTAAAAAAAAAAAAAATAAGAGTTCAGAAGTCAAACAGTATTTTTGAAGAACAAGTAGCTAGCAGA .....xx..............x..:..xxx.:..:.:.........x...x.....x..x..:x...x.:. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 136248869 53965686 +3220 chr4 + 190214555 142230599 142230598 142230707 109 CACCATTGC-ACTCCAGCCTGGGCAACAGTAGTAAAA--CTCCACCTC-----AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAACAAAATTGCCTTCCTTGGTGTGGATTTGAAGT chr4 + 94230402 69854852 69854851 69854964 69854852 69854851 69854964 113 CAACATTGCCATAGCAACCTTAGCA----TAGTAAAAGCTTATACCTTTCTGTAGAAACAGAAAAAAAAAAAAAAAAAACAGGTACAGAATTGCTTTCCCTGCTGTATAAGAGAAGT ..x......-.:xx..:...x:...----........--:.x:....:-----.:...x.:.............:....x.::x...:......:....:..x...:x.xxx..... 9M1I15M4D8M2I9M5I64M 77/105 73.3% 113/94230402 0.0% 12/105 11.4% 72375747 NA +9839 chr4 + 190214555 142237847 142237846 142238027 181 TAGTTATTTTCTCTTACCTGCACAAATCTTCTTTAATGTGAAGGGAAATCAATTCCTTAGGAATATGAAAGGAAAGAATGCTCTCTGACATCTGCTCTCGAATTCGCATCCACTTATTGTCAGATGTGGGAAATCTATATAATTTACATACTGGGTTCTTTAACACTGGAAAAAAAAAGAA chr4 + 94230402 31312539 31312538 31312719 31312539 31312538 31312719 181 TAATTCCTCATCCTTACCTTCTCATATCCTCCTTTATGTGCAGATTGATCAGTTCTTTAGGAACATGGAAGGAGAGGATGGTCTCAGCCATCTGTTCCCGGATCCGCATCCACTTGTTGTCAGAAGTAGGAAATCTGTACAACTTACAGATCGGGTTTTTTAACACTGCAGAGAGGAAAAA ..:..x:.:x::.......x.x..x...:..:..x.....x..:xx:....:...:.......:...:.....:..:...x....x.x......:..:..:..:...........:........x..:........:..:..:.....x.::.....:..........x.:.:.::..:.. 181M 134/181 74.0% 181/94230402 0.0% 0/181 0.0% 110925308 79289247 +3052 chr4 + 190214555 142240036 142240035 142240088 53 AAAACGAATCCTTCTAATTTTTAGTTTATTGTTTTCTTTTTTTTTTTTTTTGA chr4 + 94230402 42468936 42468935 42468988 42468936 42468935 42468988 53 AAGAAAAGTTCTCCTAATTTGCACTGTATTGTCTTTTTTTTTTTTTTTTTTGA ..:.x:.:.:..:.......x:.x.x......:..:................. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 99771100 90443455 +3172 chr4 + 190214555 142245754 142245753 142245822 69 ATATATATGTATATGTGTGTATATATATATGTGTGTATGTATACATATATATGTGTATGTATACATATA chr4 + 94230402 41749099 41749098 41749167 41749099 41749098 41749167 69 ATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...x.:.:::....:x..x.....xx:......:.............:..:.::.:x.:...x...:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 100496655 89717900 +3109 chr4 + 190214555 142245783 142245782 142245824 42 TGTGTGTATGTATACATATATATGTGTATGTATACATATATG chr4 + 94230402 48958675 48958674 48958716 48958675 48958674 48958716 42 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATG .......x...................:.:....:.x..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 93287108 NA +3323 chr4 + 190214555 142245789 142245788 142245860 72 TATGTATACATATATATGTGTATGTATACATATATGTGTATGTATACATATATATGTGTATGTATACATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...:..x...:.:....:x..x.:...xx:...:..:.............:..:.::.:x.:...x...:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 100496693 89717862 +3368 chr4 + 190214555 142245822 142245821 142245898 77 ATGTGTATGTATACATATATATGTGTATGTATACATATATGTGTATGTATACATATATATGTGTATGTATACATATA chr4 + 94230402 41749091 41749090 41749167 41749091 41749090 41749167 77 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...xx...:..x...:.:....:x..x.:...xx:...:..:.............:..:.::.:x.:...x...:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 100496731 89717824 +3126 chr4 + 190214555 142245898 142245897 142245970 73 ATGTGTATGTATACATATATATGTGTATGTATACATATATGTGTATGTATACATATATATGTGTATGTATACA chr4 + 94230402 41749091 41749090 41749163 41749091 41749090 41749163 73 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCA ...xx...:..x...:.:....:x..x.:...xx:...:..:.............:..:.::.:x.:...x.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 100496807 89717748 +3016 chr4 + 190214555 142245936 142245935 142246007 72 ATGTGTATGTATACATATATATGTGTATGTATACACACATGTGTGTATGTATACATATATATGTGTATGTAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACA----TGCGTGTGTATATACATTTGTATGCATCTGTAT ...x.::..::.:.:..x:...:...x........----..:....:.:.......x.:....::.x..... 35M4D33M 49/68 72.1% 68/94230402 0.0% 4/68 5.9% 55612013 NA +3499 chr4 + 190214555 142248311 142248310 142248375 65 TCTGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGAGA------TGGAGTTTCACTGTTGT chr4 + 94230402 6554016 6554015 6554086 6554016 6554015 6554086 71 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACTGAAGTTCCCTTTTTGT .:...xx..................................xx.::..------..:....:.x:.x.... 48M6I17M 53/65 81.5% 71/94230402 0.0% 6/65 9.2% 135694295 54520260 +3287 chr4 + 190214555 142248315 142248314 142248379 65 TGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTGTTGTTGCC chr4 + 94230402 6554018 6554017 6554079 6554018 6554017 6554079 62 TGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT---GGTAGGAATACACTGAAGTTCCC ....x:.................:...............---.:.:.::x.x.....xx...x.. 39M3D23M 50/62 80.6% 62/94230402 0.0% 3/62 4.8% 135694297 54520258 +9365 chr4 + 190214555 142270556 142270555 142270851 296 TTTTGATAATGAGATTTCAAACCCCACAGAGATGTTGGTGAGACAGACATCTGGCAAAGCTGATCATTTTTAATTTAATTTGTACAATGAGCAGACTGAGATCCTACCTTTTGTCCCTGTACATCTGTGGTGATGTGGTCGGCTTCCCCATCCTCAATCTCCCCCATCTTCACGACACTGACTTCTATGGTGCCAACCACTTTGCCACCATCTGAAGTTCTGCAACAAAAAAT-ACACGAAATGGAAAGGTAAGAAGCTTCTCTCTCCCCC---AAAAATA--TCCAAAACACATTTGTTTC chr4 + 94230402 31320800 31320799 31321091 31320800 31320799 31321091 292 TTTTAATAACTACTTATCA-----CAATGTGGTATGAGTAATTTAGGTATCTGGTGCAACTAAT-ACTTCTATTTAATTTTGTCCAATCA----ATTGAGTTGTTACCTTTTGATCCTGTGAATCTGTTGTGACGTGGCCTGGTTCCCCATCTTCTAGCTCTCCCATGTTCACTAGATTGACTTCAATGGTACCAACTGTCTTTCCACCATCGGAAGTTCTGGAAAAAAAAATCCCATGACATTGGGTCATACATAGCATCTCATTCCATCAATAAAAATATTTTCAGTAAACATTTAGTTC ....:....:x.xx.x...-----..xx.x.:.:.x:..:.xx:..::......::x.:..:..-.:..:..x..x.x.....x....x.----.:....x.x:.........x:.....:x......x....:....:.x.x.........:..x.x...:.....x.....x.x.:.......x.....:.....::::..x........x.........x..x.......-x..:..x..x.::xx:..x:x...x....x:...x:.---.......--.:..:x.x......:x... 19M5D40M1D25M4D139M1I37M3I7M2I19M 201/286 70.3% 292/94230402 0.0% 16/286 5.6% 110949756 79264799 +3228 chr4 + 190214555 142270871 142270870 142270978 108 TATTTACTTAATAAGACAACATCTGCATAAAACACAGCAAAACATGTTAATAGGGTAGGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTTTTTCTTTTTTT chr4 + 94230402 41434265 41434264 41434363 41434265 41434264 41434363 99 TGTTTTCTTTCTACGGGAAAATCTCCAAAAGGCAGGGTAGACTCTCAGAAT---------GTCTGGGTATTTGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTT .:...x...xx..x.:x..x....x..x..::..x:.:.:.x:x.xxx...---------..:..x..:.x...........:............:.:..:....x.. 51M9D48M 68/99 68.7% 99/94230402 0.0% 9/99 9.1% 100836606 89377949 +3394 chr4 + 190214555 142270927 142270926 142270982 56 AGGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTTTTTCTTTTTTTTTGA chr4 + 94230402 54261434 54261433 54261489 54261434 54261433 54261489 56 AGGCATTTGATTGTTTTTGTGTGTGTGTGTTTGTTTTCTTTTTTCTTTGTATTTAA ...::....xx...x.x.............x.................x.x...:. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 88009493 NA +3035 chr4 + 190214555 142332998 142332997 142333042 45 AAGACTCCGTCTCAAAAAAAAAAAAAAAAACAAAAAAAAAACCTT chr4 + 94230402 39858774 39858773 39858818 39858774 39858773 39858818 45 AAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAATCTT ..::...:....x..............x.......x.....:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 102474224 87740331 +3008 chr4 + 190214555 142367199 142367198 142367238 40 TGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGCCAGTCAT chr4 + 94230402 12409477 12409476 12409516 12409477 12409476 12409516 40 TGCGTGAGTGTGTGTGTGTGTGTTTGTACTTGCCAGTCGT ..:...x................x....:.........:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 129957722 60256833 +3537 chr4 + 190214555 142369795 142369794 142369907 113 GTGGTGGGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGACGGAGGTTCCAGTGAGCCAACACGGTGCCAC-------TGCACTCCAGGCCTG chr4 + 94230402 76033201 76033200 76033312 76033201 76033200 76033312 112 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ......--:..x....:.:...........::........x.xx:x...x::...........:..x:xx:..:.x:..------....:.:.....x-------..::.:.:.:..... 6M2D71M6D13M7I15M 74/105 70.5% 112/94230402 0.0% 15/105 14.3% 66336594 NA +6138 chr4 + 190214555 142379285 142379284 142379504 220 ATGGTATAGTGAGCAGCTGCAACCTCAGCATTTAG------CTCCATTCTCAATGAGCACATCTTCAAAGAGAGCTTTACTTAATGCCACGAAACTGAAGGAATCAGGCTCATGGCAATATAAGAAGAAATTCTTTGTGATGTGGAAACAGATGTCCCCTAACATTTTTCAGCATGTGACATCACCTTCTGCCTTGGTACACATAACTTTTTTCAGTAAGCTTAAA chr4 + 94230402 31364329 31364328 31364542 31364329 31364328 31364542 214 ATAGTTTAAAGAACAGGTGCAGCCCAAGCATTAAGACAAAACTCAAGTATCAA-----AAACTCTTAAAGACAGCACAACTCAAGCCAGAGAAAC------AATCTTCCCCATGGCAGTATGGAGAGAAGATCTTTCTGATGTAGAAACAGATGTCACTGTACATTTTTCAGAACATGACACTACTCACTGTTTT-GTATGCTTGGCTTTACTGGATGTATTTAAA ..:..x..:x..:...x....:..:x......x..------...x.x.x....-----.x.:::.:.....x...x:x...:..xx.x:x.....------....xxx.:.......:...::::....:x.....x......:............x.:xx...........x.::.....::..::x...::..-...::.x.::....x:.x::.:x::..... 35M6I12M5D37M6D94M1D30M 139/208 66.8% 214/94230402 0.0% 18/208 8.7% 111014956 79199599 +3050 chr4 + 190214555 142394128 142394127 142394166 39 GTTTTGTGTGGTTTTTTTTGTTTGTTTGTTTGTTTTGAG chr4 + 94230402 91650882 91650881 91650920 91650882 91650881 91650920 39 GTGTTATGTAGTTTTTTTTGTTTGTTTGTTTGTTTTAAG ..x..:...:..........................:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 50743246 NA +3020 chr4 + 190214555 142398374 142398373 142398437 64 TCTAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472485 51472484 51472548 51472485 51472484 51472548 64 TTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT .:.:x...x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 90925889 NA +3309 chr4 + 190214555 142398374 142398373 142398436 63 TCTAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1494993 1494992 1495055 1494993 1494992 1495055 63 TTCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .::.:::...x.:.........x.:....x..........:.:..:...:.....x....::. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 140903381 49311174 +3441 chr4 + 190214555 142398377 142398376 142398468 92 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA--TATATATATATATATAAAACATATTAAACATAGTGCTT chr4 + 94230402 90030076 90030075 90030169 90030076 90030075 90030169 94 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTACTGGTAGAAATGTAGCATTGTAAAAATCATGCTT ...x.......xxx:...::..............:.:.:............x..--.x..:xx:..x.x..:x.:...xx....x..x:..... 54M2I38M 66/92 71.7% 94/94230402 0.0% 2/92 2.2% 52368301 NA +3282 chr4 + 190214555 142398377 142398376 142398432 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 140903377 49311178 +3496 chr4 + 190214555 142398379 142398378 142398434 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 140903379 49311176 +3079 chr4 + 190214555 142398383 142398382 142398449 67 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATAAAA chr4 + 94230402 51472490 51472489 51472556 51472490 51472489 51472556 67 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAA ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:....:x:x.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 90925893 NA +3174 chr4 + 190214555 142398384 142398383 142398437 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 56849964 NA +3388 chr4 + 190214555 142398386 142398385 142398439 54 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:x.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 56849966 NA +3371 chr4 + 190214555 142398387 142398386 142398452 66 AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATAAAACAT chr4 + 94230402 85548420 85548419 85548480 85548420 85548419 85548480 61 AAAAAAAAAAAAAGAGT-----TATATGTATGTGTGTGCATACATATATATATTTATATCAGACAT .............:.:.-----.....:...:.:.:.::...:..........x.....x.:.... 17M5D44M 49/61 80.3% 61/94230402 0.0% 5/61 8.2% 56849967 NA +10730 chr4 + 190214555 142402918 142402917 142403140 223 AAAGAAGTACCAGTACTTACGGTGTCATGAGACTTATCCTTGACATCATAGACTGTTAGTTTTATTTTGGTCTCCTCATAGATGGGATACTCAGATGGGAATGTGACACCAGTCAAAAACAGTGGGTCCCTTGTTCCCTGTAACAGCACAAGCAGACAACTTTGATTCAATAAGGCAGCAACTGT--AGTTGGCAGCACGCAAGT---GACACATGAGAATGCAGAAA chr4 + 94230402 31367582 31367581 31367797 31367582 31367581 31367797 216 AAAAAAACCAAAATGCTCACCGTGTCTTGAGATTTATCTTTGACATCATAGACTGTGAGTTTTATTTTAGTTTCTTCATAGATGGGGTATTCCGGTGGGAATGTCACACCAGTCAGAAACAGTGGATCTCTTGTTCCCTGT-GCAACACAAGTAAAT-------ATTCAGTAAGGTAACAGCTGTGCAATGCATAGTACGCCATTATGGATGCATG----TACAGAAA ...:..::xxx.:.:..:..x.....x.....:.....:.................x...........:..:..:...........:..:..x.:.........x..........:.........:..:............-:..:......:.:.:-------.....:.....:.:..:....--.:.xx::..:....x.x.---..::....----.:...... 141M1D15M7D21M2I18M3I8M4D8M 166/211 78.7% 216/94230402 0.0% 17/211 8.1% 111035336 79179219 +16777 chr4 + 190214555 142404927 142404926 142405602 676 AACTCTTTGTATGAAAAGAAAAA---------AAAAGACAAGTTATTTTGTCATTTGTTCGTTCTAGTAAATTACCAATGCATTGCTTAATAATCTCAGGTATGTGCTTCTTAATGACAGAGGATGGTAATGCAGCATTGCTACAGACTATGAACTAACTTATTTCAGCTGTTCATTCAAATCCAGAGATGGGGCGGGGGTGGGGGGGAGGGAGAGAGAGAGCAAG-AGCGAGCGAGCCAGCAAGAGAGAGAGAGAGAGAGAGATTAATGTAGGCACACAGCATCTCACCTCCACAATTTCGGTGCTGGAGTATCTTGTCAGACTCTGCTCCACGGGGTGGATTACGGAGATCTGCACCAGTGTATTCAGTTTACGATCACGGACAGGAGCCACGAGATCCTTGCATGCTGGCAACGGCAGAGGAGACAGAAAGAAAAGAAACTAACACCATATCTCAGGGAAAACTTCTGCGCCGGGC-----TGAAAGTGAACTTAGCTACAGCACTGAAGGAAATCTCCTGGGGCTCAGGCTGGTTTTACAGAGGAAGTCCCTTGGAAGTACCTTACAGAAATAGGAAGTCACGTGCTGTGGAGCTGAATTGAGAGTTCATTTCCACTGACCACATTTGCAGTTCATGCAAGTCTTTACTGGTCTGAGATCC--CAGCTCTAATGCGTGACTATGCACAC chr4 + 94230402 31369254 31369253 31369885 31369254 31369253 31369885 632 AAGTCTTTGCTTGGAAAAACAGAGCTTTCATGAAAAGGCATGTT-CATTACTAACTGTTTCTCCTGGTTAAGTGCCAA-GAACTACAGAGCGCTCTTAGGTATGCTTTGCTAACAGCCACAGTGTG------CTTCCTTACCTAAGACTGTGCATTAACTTGCTTCATTT-CTCACTCACTTTT----------------TAAGGAAACAACAAAAAAAGAGCAATTAATTAACATGTTAACTGAATA-------AGAAAGACA--------------------CTCACCTCCACGATTTCAGTACTTGAATACCTCGTCAAAACGTGCTCTGCTGGATGTACCACTGAGACTTGTATAAACGTATTCAGCTTCCGATCACGGGTAGCAGCCACTAGATCCTTGCATGCTGGAGACAGTACA----AAAGAAAAATAAAATCCTCAATTGAAAACTCTGGGAAAAC-TCTGCCACAGGCACAGGACAAAGCAGACTATACTGCAGCTCCAGCTCAAATCTCCAGAGA--CAAGCCGATTTAACAGAGGAAGTCTCTTGGAAGTAACTTACAGAAATAGGAAGTCACATGCTGCAGAACTGAACTGAGATTTCGTTTCCACTAAAAATACTTGCAGCTTCTGCAAAGCTC--CCTACCAGAGACTCATCAGCTCCAGAATACAAATATGCGCAC ..x......:x..:...:.x.:.---------.....:..x...-:x..:::.x:....:x.:..:..x..x.:....-.x.:.:.xx.:::x...:.......:x:.x..x.xx.x..x..x:..------.xx.x..:.:xx.....:..x.:......::....x:.-:...:...xx.::----------------.::..:::x::x.:.:.:.......x-.::x.:.:x.::.:.x::.x.-------...:...x.--------------------...........:.....:..:..x..:..:..:....:.x:x.....::.x..:..x.::..x....::..:.:x.::........:..x.........::..x......x.................x:..:.:.x.----.x.....:.x..:.xx..x.xx:x.x.x...x........-.....xx.:...-----xx....:::...xx:..:....x.:::xxx........x.:.:--..:..:.:...x............:..........x.....................:.....::..:.....:.....x...:........:.xx.:.:......:.:x.....:x..:--.:x::.x....::.--......:.:x:::::.x.....:... 23M9I12M1D33M1D47M6D38M1D13M16D26M1I21M7D9M20D138M4D40M1D12M5I43M2D120M2D14M2I26M 409/615 66.5% 632/94230402 0.0% 78/615 12.7% 111035673 79178882 +3019 chr4 + 190214555 142413132 142413131 142413217 86 ATAAAAGTTGGCATTAAAAAATTAGAAAATGTGTGGGTTTTTTTAGTTTGTTTTCTTCTGTCTTTTAAGGCACTAAGTTCTAAAAA chr4 + 94230402 28561183 28561182 28561268 28561183 28561182 28561268 86 ATGAAAATCTTCAGTTAAAAGTAAAGAAATCTAGTGGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTAAGTAGAGAATATGAAAAA ..:...:.:xx..x.x....:.x.::....x.:xx.........x.........x..:...:....x.:.:.xx:.:.x:x..... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 113851949 76362606 +20609 chr4 + 190214555 142431157 142431156 142432274 1118 ACACATACTTACTTGTGAACTGACAGTCCCCGGGATCATTGGCCTGGGCTGTAGGAAGAAAGTGCTGCCCTTCTTCTGATGCCCCTTCCTCTTTAATTTCCATGATCAACCTTCACAGTTTTAAAATTT-----------TCCAAATTTTCTTGTCCAAATGTCAGTTCTAGTGATTCCTGGTTTAATGTAGATGTATCTTCACACTAAAGATCTGATATCCCACTCTGAAATTCTGTACCTAGGAAACATCAAAAGTTAAAATTTCAGTCATATTGGAGTTCAGTATAAAGCTAAAAAGTAAAGGTAAGTAGAGAC--TGCAACTACATTCAAATAAACTTTCTTCCTGCC-----------TACTCCACTCATACTTTCAGAACCATTCC--------ACACAGTTAATGCATCATAAAGTCTAGGTTTAATAGGTATTCTC-AAAGCAATTATTACATAGTCATATGAAAGATTTCTAAAACA---TGAAAGGTGTATTATTTATCTTCTAGTTCAG--TCTGTAAGATAGTGGATAGCTATAGGGGCTGCTAACTTAGTATAAAACCTAATTTAGCAGCAAGAGCATGTAGCATCTTGTCAAGACATTACCATGTTTTGGCAAGGTGAATATTACTATCGTTCTTTCCATTAGAATTGCCCTTTATGCTCATCTCTCCATCCACCCTTGTTAGAACATTATTACTGACCACATAAAAAATAATTTGGCATGACATTCTTCTTCCAAGATGAGCCAACAGGTTGTACAGGAGAGTTTCCAACCTCATTATTATCCATGGAGTCTTTTGCTGCTCTACTTGATAAAGGTGTAATTGTTTAATGATCATGGTATATGCTGA------AAAGAATGAATCATTCTTCTAAAAAGCTAAAGCTCAAGGGGAAATTAAAGCAA-----------TAGAAAATTGATGAAAATTAGCATGGGGAAAGAAAG--ACTCTCCAAGAACTTAATACCCTGTCATACAGACAGCCTCAAATACTTACAAATTCATTTTTATATTTAACATGATATATATGACCAAGAATAAATTTTTTAAAA------AATCAATGTTGTTTTAAATCAAGTTACCAGCTGAATTAAAATGTATAAAAATAT-TTAAATGTCTGCCCAATGCCGTTTAATGAGATAGCAGTAATCAAGT chr4 + 94230402 31385366 31385365 31386495 31385366 31385365 31386495 1130 ATATGCACTTACTCGTAAGCTGTGGCTCTCCTAGACTGTCTATTTGTGATGAAGGGAGAAACTGTTGTGCTTCATCTGATGCTCTCTCCTCTTTGATCTCCATGATCAACCTCCAGGCTGATGAATTTTATTCCTCAATCTTTGAGTTTGCCTCTCCCAGTGCCACAGCCCAAGATTCACAATCTGCTTTTGATGCAGCTTCGGGGTAAAGATCTGGTCCTCCACTCTGAAATTCAGCTATCAGAAAACATTAACACT---GATTTTAGC--------AATTCTTTCTCAGACAATGGGTCACAACAAAATTCATACCATGCA---CCATTAAAACCACTGTTTCTTCTGTCACAGACCCATGCACCCCATTTA-ACTCTTGAATCAAACCCCTATTCTTACATACTCAGTGCAGTACAAAGCTTA--TCCATGGAGTGCTTTCAAAAGCAATTAAAATATTGCTAAACG--AGGTGGCAGAATCAAATTGAAATGGG---AAGCTCTTTTTCAGTACAGATTCTGCAGCTCAGCAGGTACCTATCAGAACTGCTAACTTAAAGTGGAATTTGATTTAGCAGGGGCAGCAGACA------CATAGAGGCAGT---GGGATTTAACA----GAATGTGTTCATCAGTTCTTCTATATGAGCTGACCTTTACGCTCAGTGTTTTATTCATCTTTGGCAGAGTACTGCTCATCAATACAC-AGAGATAATTTAGCATGACATAGTTCCTCTGGTAAGATCCACCAAGTTGTGCATGAGAGTTTCTGCTGTCATTACTATCCA---AGTCTTTTACTGCTTTGCCTG----AAGTCTGATTGTTTAATGATCAGGTTTTCCAAGGACAAATGAAAAGAGGAATTA-------AGTAAGTTGAAGCTCCTACAGAAATGCAGGTAAGCAGCAAGGGTCAGTCATTTGATTTGAATTAGCACAGAAAGAATAAGCAACTCT-TAAGCATTTGAAATTCTGTGACACAGACAACTTCACAAAGTCACAAATTCCATGTGACATTTTCTGCTATACACACAATTAAGAATGAACTGGGAAAGAAACAACAATTAATGCTTCTTTAAAAGATGCTACCGACTGACTCAGAA-ACACAAAAGTCTATCAAGTACCTGTGTTACTACATTTAATTAAAACTTAATAATTTGGT .:.:::.......:..:.:...xx:x..:..x:..:::.:x:::..x.x..x...:.....x..:..:x....x........:.::........:..:..............:..x:x.xx.:..x...-----------.:::.:...x.:.x...x.:..:..xxx.:x:x.....x:::.:.:x.x.x....:.x....:x:x..........:.x::..............x.:xx::..:......:..x.x.---:....:..:--------.:...xx.x.x.::.x.x:::x:.x.:xx..:.xx.x..--....---x....x...:x.x:x..::.:...:.-----------:..:...:.:.-...:.:::.x.x.x:..--------...:.x.:.:....x:.:....::..--.::.xx::..::.:..-..........xx.:..x.::.x.:.--..:.xx.x:..x..---.....x.x.---x.x:.x.:..::...x...--....:.:xx:..::.:..x....x:.::...........:x:.::..::.:.........x::x....x::.------::.x:..:..x.---:x.x...::..----....:.xx::...:x.::...:..xx..::..x......:.....x:x:.::..:..:.:...x:...::.:.::.xx.x.x:...:-.:.:.......:.........xx...:..:::x.x..x...x..:.....:..x.........::x:x......:......---........:.....:.:.:..----.:..x.:...............x.x.x.x::xx..------...::.x....:.-------.:x...:.:......xx:x:.....xx.:.:..-----------:..xx.x.....xx:........::.::.:.:x...--.....-:...x.:..:.x.::....x.:.......:.:...x.x.x.:........xx.x.x.:....xx:::x...:.:.::.::......:..:.xxxx..:.------...:....:.x:......xx.x.:....::....x.:.:..-::.:....:.x.-.:..:.::...:x:x.:xx.:......x.:.xxx:.:....:x:.. 129M11I118M3D9M8D39M2I4M3D26M11I11M1D17M8I26M2D16M1I25M2D14M3I9M3D19M2I72M6D12M3D11M4D87M1D81M3D21M4D35M6I13M7D33M11I36M2I5M1D99M6I41M1D12M1I46M 662/1066 62.1% 1130/94230402 0.0% 116/1066 10.9% 111045791 79168764 +3202 chr4 + 190214555 142448326 142448325 142448374 49 CTCCAAAAAAAAAAAAAAAAAAAAAAAACACCGAGCAAGTCTCAGTTAC chr4 + 94230402 88131835 88131834 88131883 88131835 88131834 88131883 49 CTACAAAAAAGAAAAGGAAAAAAAAGAGCACCAAGAAATTCTCAGTTAC ..x.......:....::........:.:....:..x..x.......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 54316491 NA +3041 chr4 + 190214555 142457742 142457741 142457780 39 TCTGCTAGTTTTGTTTGTTTGTTTGTTTTTGTTTTTTAA chr4 + 94230402 9475530 9475529 9475568 9475530 9475529 9475568 39 TTTGCTTGCTTTGTTTGTTTGTTTGCTTTTGTTTTTTAA .:....x.:................:............. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 132982212 57232343 +3157 chr4 + 190214555 142475307 142475306 142475384 78 CAAAAACAAAACAAAACAAACAAAAAAACATCTAAAGGACAGCAACTTCAAGGACTGAAGGAATATCAGCTCACACAG chr4 + 94230402 6760484 6760483 6760561 6760484 6760483 6760561 78 CAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAAGCAAGCAAAAAAACATCACCAGTTAAAACAG .............................x:.:...:x..::x:.xxx....x.xx:..:x.x:.:...:.x.x.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 135714823 54499732 +3252 chr4 + 190214555 142498080 142498079 142498150 71 ATCTTGCAATGTATTTTGTGTGTGTGTGTGTATATATATATACACACACACATATATGTATACATACATAT chr4 + 94230402 34521994 34521993 34522064 34521994 34521993 34522064 71 ATCTTGAAGTAGATTCTTTGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGT ......x.:.:x...:.x...........:.:.:............x.x.xx.xx.......:.x.::.:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 107976086 82238469 +3353 chr4 + 190214555 142530540 142530539 142530591 52 TATGTGTGTGCATATATATATATATATATATATATATATACACACACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA ..............:....:x..:.:.:.....x.:.x......:....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 97714940 92499615 +3164 chr4 + 190214555 142530553 142530552 142530605 53 ATATATATATATATATATATATATATACACACACACACAGACGCACATACATA chr4 + 94230402 61270775 61270774 61270827 61270775 61270774 61270827 53 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATA ..:x......x.:.......:.......:...::........:.x...::... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 81259778 NA +3146 chr4 + 190214555 142530560 142530559 142530650 91 TATATATATATATATATATACACACACACACAGACGCACATACATACACATAAGGAAGAAAATTAAG---GCAGAAAA-----------AAATAATTGAGAACAA chr4 + 94230402 74671076 74671075 74671171 74671076 74671075 74671171 96 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTA---------AAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAACAA .:................:.............:.x:x.x...xx..---------..:........:---......:.-----------......x.x.x..... 46M9D12M3I8M11I16M 67/82 81.7% 96/94230402 0.0% 23/82 28.0% 67859484 NA +3028 chr4 + 190214555 142530562 142530561 142530620 59 TATATATATATATATATACACACACACACAGACGCACATACATACACATAAGGAAGAAA chr4 + 94230402 4409082 4409081 4409140 4409082 4409081 4409140 59 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAAA .:..:.............:.........x....:....:.:x.x.x.xx:x:....... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 138121480 52093075 +3599 chr4 + 190214555 142545692 142545691 142545799 108 TATATGTGTATATATATGTGTGTGTATATGTGTGTATATACACATATATGTGTATATATATACACATGTATATGTGTGTATATATATACACATATATATGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....::...:.:.x.x....x.:....x.:.:....:x:...:...:x:.....:x....:::.::.::x:...:x.x.:.:.....::::..:x.....::..:.:. 108M 64/108 59.3% 108/94230402 0.0% 0/108 0.0% 121436498 68778057 +3348 chr4 + 190214555 142545703 142545702 142545774 72 ATATATGTGTGTGTATATGTGTGTATATACACATATATGTGTATATATATACACATGTATATGTGTGTATAT chr4 + 94230402 55694437 55694436 55694508 55694437 55694436 55694508 72 ACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:.x...:x:x...x:x...:..:...:.:...:..:.......:.:...x.x......::.....:..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 86851266 NA +3084 chr4 + 190214555 142550565 142550564 142550615 51 TTTCATCATTATATATGTAATATATACACACACACACACACATATATATAT chr4 + 94230402 58011827 58011826 58011877 58011827 58011826 58011877 51 TTCGATAACTGTATAAGTAATACATACATACACATACACATATGTATATAT ..:x..x.:.:....x......:.....:.....:.....:..:....... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 84538738 NA +3377 chr4 + 190214555 142550577 142550576 142550628 52 ATATGTAATATATACACACACACACACACATATATATATATATATTTTTTTT chr4 + 94230402 67665825 67665824 67665876 67665825 67665824 67665876 52 ATGTGTAATATATACATACACACACACACATATATATAAATTAACTTAGTTT ..:.............:.....................x..xx.:..xx... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 74884752 NA +3032 chr4 + 190214555 142575227 142575226 142575265 39 AAAAAAGAAAAAAAAAGGGGAAATGAAGAACAAAAGTTT chr4 + 94230402 82059867 82059866 82059905 82059867 82059866 82059905 39 AAAAAAAAAAAAAAAAAGGGAAATGATGAACAAAAGCTT ......:.........:.........x.........:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 60515360 NA +3237 chr4 + 190214555 142594819 142594818 142594884 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGAACTGCTTGAATCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.::...:....x.xx.x...x::......:....:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 66561618 NA +3407 chr4 + 190214555 142594936 142594935 142595003 68 CAGGGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGGCAGAGCATGAATGCAGTAAA chr4 + 94230402 4339985 4339984 4340052 4339985 4339984 4340052 68 CAGAAGGATACTTTCCACCAAAAAAAAAAAAAAAGAACAAAAGAATGTCAAAGCATGGATACTATAAA ...::x..x...:.x:x:................:..x.......x.x..:......:..:.x:.... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 138254951 51959604 +3005 chr4 + 190214555 142611594 142611593 142611660 67 AAACACTTAATTTTCCTTCTGGAAGTTCTGTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 27283376 27283375 27283442 27283376 27283375 27283442 67 AAATAGGTGCTTTTTCTTTCAAAAGTCCTATTTCACTATTCTCCTCTTTTTTTTCTTTCTTTTTTTT ...:.xx.:x....:...::::....:..:...:x::x..:.:..:........:...:........ 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 115328218 74886337 +3171 chr4 + 190214555 142611601 142611600 142611664 64 TAATTTTCCTTCTGGAAGTTCTGTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTT----TTTGAG chr4 + 94230402 9499711 9499710 9499778 9499711 9499710 9499778 68 TAATTCTCCCTGTGGGAATCAGGTTTTTTCTTTTTTCTTTTTCTTTTTAAATTATTTTAGACTTTGAG .....:...:.x...:.:.:xx....................:.....xxx..x....----...... 58M4I6M 51/64 79.7% 68/94230402 0.0% 4/64 6.2% 133111890 57102665 +16818 chr4 + 190214555 142684900 142684899 142685423 524 TAATCCAAACCTCAAAAGGTCAGTTTGAACACTGCATGCTGGTTATATATTAATAAAAAGGAATAAATCAAAGAACATATGTGTGACTTTGAACATTTCTAAAATTTAATTTATTTTAAACTGCTGCCAAAATGTAGATATTTATTTTCTCTGACATTATTCCCTGATTCAGACTTAAGTATGTCCTCAATAACTCTGAAAGGCAGAACAGTCAGTGATATATC---AAAGGAA---TGCTGCAGCTTCAGATATGCTTCTTCCCAATTTTACAAGCCATAGCAATATTACTTAATAAGCAGAAGCTGACTTCTGCCAACAGAGTTCTATACTTGCCTGAGACAGGCAAATATATAGTATTTTACAAGAAGAACATTTGAATATTTACCATTTTATAGATCCTCGTTGACTGAAGAGAGGAGAAAAAAAGCCAATTGCACT--TTAGAATAATCC---TTCATTGGGGAGACATTTT-TAGTGAGTAATATTTCAAAGACTA-TTCAGTGGTGAAAAAAGTATTGTATAAACAATAA chr4 + 94230402 31437579 31437578 31438102 31437579 31437578 31438102 524 TAATTTGAAATGGAAAAGGTCATTCACAACACAGAATGCCAGGGATATATTAAGGGAAGGAAATGAATCAAAATGGGAACACCTGACTCTGAACATTTCTCAAGTCTAATTTACTTTAAACTACTGCCAAAA-GTA-ACATTT-TTTCCCTTGACATTATTTTCTGATTCACACTTAAGAGTGTCTTTTATAATTCTGAAAGGCATAGCAGCAGACAATTGATCATAAAATGAAAGCAGCTGCAGTTTCAAATATTCCTTTTTCCTATTTATCATGCCACAACTATGTTTCTTAATAGGCAAGAACTGGCTTCCTTCAATAGTCTCCTGT--TCACTTTGGATAGAAAAATACATATCCCTTTTAAAGAAGCACG-TAGACCATTTACCATTTTGGAACTCCTTCATGACTAGAAAGAAAGGAGCAGCAGCCA---GCAATGATTAGAACAATACCAATTTATTAAGGAGACACTTCACACTGTTCTATATTTC----ACTAGTTCTCAAGAGAAAGAAATCTCACTAAAACAATAA ....:::..x:xx.........x.:xx.....x.x....::.xx.........x::..:.:...:.......:x:x:x.:::x.....:...........x..:.:.......:........:.........-...-.:....-...:.::..........::........x.......x:....:.:x....:...........x.:...:x::::..xx...---...x...---x.......:....:....x.:.:..:..x....xx..x....:.:.x..:..x.......:...::.:...:....:x:...:..xx.:..:.--.::.:.x:..:..:x.....:...x:x:...xx......x..:-.x..x:............:x.:x....:xx.....::.:...:::..:x.:x.....---...x.--......:...x.---..:...::.......:..:-:.x..xx:x.......----....-...xxx:.x....:..:.x.:::xx......... 132M1D3M1D6M1D80M3I7M3I93M2D43M1D57M3D5M2I12M3I19M1I16M4D4M1I34M 355/511 69.5% 524/94230402 0.0% 26/511 5.1% 111247321 78967234 +3307 chr4 + 190214555 142693445 142693444 142693576 132 TTCTGGCATTTAGCTG----GCTATCTTAAAATGCCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTGACATCTTTAAGGAACTCTCCATTTGTAAGGGTGTCTG chr4 + 94230402 55642561 55642560 55642689 55642561 55642560 55642689 129 TTTTGGCATGAAAATGTGCAGTTATGTTGAAAT-------TCTGAGGTAGACAAATAGAATTAGGTAATAAAAATAAAAACAAACAAAAAAAAATACCAAGTTGTATGAAAAGTTCTCCACTTGGAAGAGTGTATG ..:......xx.:x..----.:...x..:....-------...:.::x.:.x...x.:..xx.::x..x.....x.....x...x.........xx.::.xx.x.x.:.::.::......:...x...:....x.. 16M4I13M7D96M 83/125 66.4% 129/94230402 0.0% 11/125 8.8% 87050884 NA +3274 chr4 + 190214555 142693469 142693468 142693591 123 AAAATGCCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAGCCTGACATCTTTAAGGAACTCTCCATTTGTAAGGGTGTCTGCTTGCATACATTAAA chr4 + 94230402 5872031 5872030 5872149 5872031 5872030 5872149 119 AAAACACCTTTTCCTCCAGAAAAAAAAAAAAAAAAAAGAGAATTAAGGTTGAAAAAAATATATAAAAATCAATGTTTTATCCT--------TTTTCATTTTGGAAAGT-TCTGTCTCCATATATTCAA ....::......:..xx.:..................:.:..xx..-----.......x.x.x.....xx.::x.xx:...:.--------.:.:.....xx:.::..-....::.x....:...x.. 46M5I32M8D17M1D19M 80/114 70.2% 119/94230402 0.0% 14/114 12.3% 136821438 53393117 +3065 chr4 + 190214555 142693491 142693490 142693553 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTGACATCTTTAAGGAA chr4 + 94230402 22790719 22790718 22790781 22790719 22790718 22790781 63 AAAAAAACAAAAAACAAACAAAAAAAACCCACAAAAGAACAAAAGCCTGAAATAGATAAGAAA .......x......x...x........xxx.x....:..x..........x..xxx....:.. 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 119902772 70311783 +3162 chr4 + 190214555 142720755 142720754 142720829 75 TATATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618329 4618328 4618403 4618329 4618328 4618403 75 TATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTA .....x:.xx..x.:.:...:...:x:x.::.x.......::..............::x...::......x.x.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 138102426 52112129 +3068 chr4 + 190214555 142720762 142720761 142720825 64 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA chr4 + 94230402 4618344 4618343 4618407 4618344 4618343 4618407 64 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .:...:...:x:x.::.x.......::..............x:..x.x:......x.x...... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 138102418 52112137 +3545 chr4 + 190214555 142720762 142720761 142720852 91 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA---TATAGTTTTCTTATTTTTTATTTTTTG chr4 + 94230402 4618342 4618341 4618435 4618342 4618341 4618435 94 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTG .:.:...:...:x:x.::.x.......::..............x:..x.::......x.x....---.....x.x.x....x.x....x.x... 64M3I27M 65/91 71.4% 94/94230402 0.0% 3/91 3.3% 138102420 52112135 +3097 chr4 + 190214555 142720763 142720762 142720829 67 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618339 4618338 4618405 4618339 4618338 4618405 67 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATA ..x.:.:...:...:x:x.::.x.......::..............x:x...::......x.x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 138102424 52112131 +3756 chr4 + 190214555 142720764 142720763 142720849 86 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATAGTTTTCTTATTTTTTATTTT chr4 + 94230402 4618342 4618341 4618427 4618342 4618341 4618427 86 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT .:.:...:...:x:x.::.x.......::..............x:....::......x.x........x.xxx...x..x...x.. 86M 61/86 70.9% 86/94230402 0.0% 0/86 0.0% 138102422 52112133 +3304 chr4 + 190214555 142721690 142721689 142721750 61 GCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.::.x......:...........::........x.xx.x...x::.........:.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 66688486 NA +16369 chr4 + 190214555 142725825 142725824 142726289 465 AAAATAAGCATTACCTTTGTCTAATTTTTCATAAAAGACAGAAGACCTCTTGCCAGGTAACACCATTTCT---TTGTATTCTACGGGAAAAGAGAAAGAAGATTAATAAAAACAACCTTTCTTTTTTCCTCTTTAAATGCTTCTTAAAGAA-GATTCATTAGTAATAAAGGTCAGAGAAGAAAATCATT------TAACAAAATATTCAGCTCCATTCAGCAGCTGCCTCAGGAAACACTTGCT-TTAAATGCCAAATCACTTCCCCAAATGTCCTTTCTCCCTTACAGCTGAGAACATGGGTGACTGCAGCAGATACTCAGCCCTGTTTTCTTTGCTTCTCTTTCTTC-TCTCACATGTGAACA-AAACTGGCACTCGAGCAAGAAAAGGCATTAGCTTCCATCATTTCAAAAGACAAGATGTAAGCAATGTCAGGAC-AGAACA--------TTTACTTGGAATACAATGGACTGAAATGGAATT chr4 + 94230402 31454440 31454439 31454914 31454440 31454439 31454914 475 AAAATGA--ATTACCTT------ATTTTTCATTAGAAAGAGCAGATTTCCTTTCAGTCAGCACCATCCCTCTCTTGT-TTCTGTATGCAAAGAAGTATGAGATTAATAAAAACAACCTTTTGTCTTCACACATTAAAAGCTTCTTAAAAAAAGATGCATTAGTAATAAAGGTCAGAAAAGAAAATCATTAACAAGCAAAAAAAAAGCCAGCTTCACTCAGCATCTGCCTATATACA-ACATGCTGTTAAATGTCAGATAACTTCCCAGAAGGTTTCCTCTACTCTGCAGCTGAGAGAATTGGTGACTGCAGCAGACACTCCGCTGTGTTTTCTAT--TTCTCTGCTTCCATCTCATATGGGAGCAGAAACAGGCAGTTTAGCATGCTACAGTTTTCACTCCTATCATTTCTAAAGGTAAAATATAATCCTTTTAAACACAAAAACATTAAGTATTTTACTTAGATTATGACATGCTCATCTGGATTT .....:.--........------.........x.:.:.x..x...::..:.x:...x:.:......::..---....-....:::x.x.....::x.x:.....................:x.:..:x.x.x.....x..........:..-...x....................:............------:..x....x.x:.....:..:......x......xx:x.x.-..x....-.......:..:..x.......x:..x..::::...x.::.:.........:x..x...............:....x..:x........x.--......x::.:.-.....:...x..:..-....x....x.:x....x.xx.x:.:x..x:..:.:........x....::..:..:...x.xx.x.x.:x..-.:....--------.......:..x..::.::x:..x.xx....x.. 7M2D8M6D47M3I4M1D73M1I37M6I41M1D7M1I90M2D12M1I15M1I73M1I6M8I33M 333/453 73.5% 475/94230402 0.0% 34/453 7.5% 111271385 78943170 +3114 chr4 + 190214555 142749001 142749000 142749131 131 GTGGTGACACATACCCATAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAAGTACTTGAACCTGGGA----------GGAGAAGTTGCTGTTAGCCAAGATTGTGCC-----ACTGCTCTCCAGCCTGAGTGACAGAACAAGACT chr4 + 94230402 76033201 76033200 76033339 76033201 76033200 76033339 139 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATG-GTGACTGCAGAGAGCT ......-----:..x::..:.:...........::........x.x::x....:.........::.:.----------.x....xx..x..::.:x..::xx......-----x......-.....x..-.....x.x.x.:::.. 6M5D57M10I30M5I7M1D8M1D16M 87/124 70.2% 139/94230402 0.0% 22/124 17.7% 66715800 NA +3489 chr4 + 190214555 142758822 142758821 142758895 74 GTACACTTGTAGTTCCAGCTACTCGGGAGGCTGCGGCACGAGACTCGCTTGAACCCAGATGGTGGAAGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x................:.::......x.x.x:.x..xx.:............x.x.xx::.:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 66725618 NA +3127 chr4 + 190214555 142772907 142772906 142772988 82 GTGGTGGCACACACCTTTAATCCCAACTACTTGATAGGCTGAGTCACTAGAATTGCTTGAACCCGGGAGTCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x.x..:.:...:........x........:.x:xx...x::.........:.:..::xx:..:..:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 66739706 NA +3196 chr4 + 190214555 142781936 142781935 142781996 61 TTCTAACTTTTGTCTTGCTAACCTTTTATTTTTTTTATTTTTTAATTTATTTTATTATTAT chr4 + 94230402 74504452 74504451 74504512 74504452 74504451 74504512 61 TTCTAATTCTTCTCTGGGTAACATTTTATTTTTTTAATCTTTTATTTAGTTTTAATCTTAT ......:.:..x...x.x....x............x..:.....x..x:.....x.x.... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 68277484 NA +3192 chr4 + 190214555 142784720 142784719 142784769 50 AAAAATGTTTTTTTTTGGTTTGTTTGTTTGTTTCAGAGAAAAGAGAAGAG chr4 + 94230402 14017858 14017857 14017907 14017858 14017857 14017907 50 AAATATGCTGTTTTTTGGTTTGTTTGTTTGTTTTAACGTAAAGAGGAAAG ...x...:.x.......................:.:x.x......:.:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 128766862 61447693 +3073 chr4 + 190214555 142794917 142794916 142794966 50 TATACACTTTTTTCATGTTATATATATGTGTGTGTATATACATATATATA chr4 + 94230402 21429697 21429696 21429746 21429697 21429696 21429746 50 TATAAACGTTTCTTTTGGTTTATATATGTGTGTGTATATATATATATGTA ....x..x...:.:x..x.x....................:......:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 121365220 68849335 +3104 chr4 + 190214555 142803132 142803131 142803209 78 ACTGCACTCCAGCCTAGGCAACAGAGTGAGACTACGTCTCAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAATGA chr4 + 94230402 25699775 25699774 25699852 25699775 25699774 25699852 78 ACAGAATTCTATGTTAGATAAAAGATTAAGAAGGTGTTTTTTAATAAACAGAAAAGAAAAAAAGAAAAAAAGAAATGA ..x.x.:..:.xx:...::..x...x.:...xx::..:.:xx..x...x.:........:.......:.......... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 117103357 73111198 +3038 chr4 + 190214555 142806734 142806733 142806804 71 ACCCTGTTAAAAAAAAAGAAGAAGAAGAAAGAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGA chr4 + 94230402 71489664 71489663 71489734 71489664 71489663 71489734 71 ACACTGTTAAAAAAAGAGAAGGAAAAGAACTAGCAAAAGAAAAAAGAAAATAGTTGCATAAGAAATACAGA ..x............:.....:.:.....xx.:x...::..:.......:x..xx:x:x......x.x... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 71317070 NA +3055 chr4 + 190214555 142808109 142808108 142808156 48 CACACACACACACACACGAAAAGAAACAAAGAAAAACAAGCCATCCAT chr4 + 94230402 39719037 39719036 39719084 39719037 39719036 39719084 48 CACACACACGCACACACAAAAAAAAAAAAAGAAAAAAGTGCCACCAAT .........:.......:....:...x.........x:x....:.x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 103089072 87125483 +3226 chr4 + 190214555 142839327 142839326 142839399 73 GTGCGCCTGTAATCCCAGCTACCCAGGAGGCTGAGGCAGGAGAATCACTGGAACCCGGGAGGCAGAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.x....:.:........:::::........x.xx.x...x....x......:.:..x:xx:.....:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 66806123 NA +3683 chr4 + 190214555 142842514 142842513 142842633 120 ATTACATATAT--TATATTATAATATATACAATATCTATTATATATAATATATAATATATGATATATAAGATAGTTATTGTATTATTATATGTATAATATATAATATATTTATATATAATAA chr4 + 94230402 26382918 26382917 26383037 26382918 26382917 26383037 120 ATTACAGACACGCTCTATTAAAGTACATAATGTAT-TGTAATATATATAATGCAATGTATGATTTATAATACAGTGTTTACAATCTCTGATGTACAATATACATTACACTTACAT-TAATAA ......x.:.:--.x.....x.:..:...xx:...-.:.x.......xx..::...:......x.....x.:...xx..::.x.x.:xx.....:......:.x..:.:...:..-...... 11M2I22M1D79M1D6M 83/118 70.3% 120/94230402 0.0% 4/118 3.4% 116459596 73754959 +3247 chr4 + 190214555 142842670 142842669 142842730 61 TATAATATTAATATATTAATATAATATATAATATATAAATATAATATATTAATATATTATA chr4 + 94230402 25322059 25322058 25322119 25322059 25322058 25322119 61 TATAACATTAGTATATATATGTTATATATGTTATATAACTATAACATAGTTATATATAATA .....:....:.....xx..:.x......:x.......x.....:...x.x......x... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 117520611 72693944 +3378 chr4 + 190214555 142878115 142878114 142878255 141 CTAGTCTGGGTGACAGCATGAGGCCTTGTCTCAAAAAAAAAAAGTAATATAAAACTACAGTTAACAAAACAGTGTGTTGTTGGCATAAGAATAAGCATATTCTTGTTTATAGATTTATAGACAATTCATTTCACTTTTTAA chr4 + 94230402 7348226 7348225 7348366 7348226 7348225 7348366 141 CTTGTCTACCAGGAAGTATGAGGCATCCTCATATACAAAAGGCATTGTATAAGAGCACAGTCAATGGAACAGTTTGTTATTTACACTGGAAATAGCATTTTCCCCATTCTTTGTATAGAGACAAAGTGTTTACCGGTTTAA ..x....:xxx.:x..:.......x.:x..x:.x.x....::x:.x:.....:.x:.....:..:::......x....:..x:..:x:...xx.....x...::xx..x.xx:.x..x......xx::...xx.xx..... 141M 85/141 60.3% 141/94230402 0.0% 0/141 0.0% 135529889 54684666 +5412 chr4 + 190214555 142885841 142885840 142885979 139 GTTCATTTATAAAGACTCCCAGAATCTGTTCTTTATTTAGGCAACATCAGACTTGCAAGGTAATAAGCTGGAACAGAGATTTAGAGAGAGAGAAAAAGCCTACTTCAGTTGATAGAGTTCAAAAAGCATTACTTAAGTC chr4 + 94230402 31504582 31504581 31504714 31504582 31504581 31504714 133 GTCAGTTTATTAGGGCATCTAGAATTTGTATCTTACTCAAGAGACATTTTAGTTACAGGCTAATCAACTGGAAAAGACATTTGGTGAAAAAGGA------TATCTTAGTTGATATAGTTCAGAAAGCATTAGTTAAGCC ..:x:.....x.:.:.x:.:.....:...x::...:.:.:.x:....:xx.x..:..:.x....x.:......x...x....:.x..:.:..:.------..::.:........x......:.........x.....:. 94M6D39M 92/133 69.2% 133/94230402 0.0% 6/133 4.5% 111381259 78833296 +3012 chr4 + 190214555 142889529 142889528 142889619 91 TATATATATATATATACACACACATATATATATATACACACACATATATATACACACACATATATATACACACATATATACACACATATAT chr4 + 94230402 54963193 54963192 54963283 54963193 54963192 54963283 91 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .:.....x:...:.x.::.....x......:.:.:.....xx..::.::::x..:.....:..x.....:x.xx.x.x.x:x:.....:.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 87926336 NA +3141 chr4 + 190214555 142889556 142889555 142889606 51 ATATATATACACACACATATATATACACACACATATATATACACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x:x:.:..........:.:........x..x..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 96748700 93465855 +3011 chr4 + 190214555 142889564 142889563 142889621 58 ACACACACATATATATACACACACATATATATACACACATATATACACACATATATAT chr4 + 94230402 74526066 74526065 74526123 74526066 74526065 74526123 58 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ....xx.x..x:.:.:..........:x.:.......x........::.:....:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 68363498 NA +3141 chr4 + 190214555 142901663 142901662 142901758 96 CTATCAAAAAATAAAAAAAATTTTTTCTCATTTATTCAGTTCTAATTCTTTCTTTCAAAAATGTTTTAGAGGTTTTTTTTTTTTTTTGCACATAAA chr4 + 94230402 84802801 84802800 84802895 84802801 84802800 84802895 95 CTACCACAAAA-AAAAAATATTTTTCCTCATTTTTTCTGTTTCTTTTCCTTAGGCTTGGAAGGATTTGGGGGACCTTTCTTTTTTTTTAACCCAAA ...:..x....-......x......:.......x...x...::xx...:..xxx::x::..x.x...:.:..x::...:........xx..x:... 11M1D84M 64/95 67.4% 95/94230402 0.0% 1/95 1.1% 58098862 NA +3131 chr4 + 190214555 142914337 142914336 142914401 65 AACCAATAACATATATATATATACATACATATATATATACACACACACACATATATACACACACA chr4 + 94230402 61270771 61270770 61270835 61270771 61270770 61270835 65 AACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .....xx..:....x.:......::..:...:::.::......x....x...:....x::..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 81643566 NA +3096 chr4 + 190214555 142949777 142949776 142949894 118 ATATCGATAACAAA-ATCTGGCAAAGACACACACACACACACACACACACACACACACACACACAAAACTACCAGCCAATATAACTGATGAACATAGACACAAAAATCCACAGCAAAAT chr4 + 94230402 60987230 60987229 60987348 60987230 60987229 60987348 119 ACATTTAGGACAAATGTCTGCCACAGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGCAAGACTATCAGAGCTATAGAAAAAATACAGACAGATTAAAAGGAAAAT .:..:x.x:.....-:....x..x...:.x...x.:...:.:......x........::.x.......xxxxx::.:.x:.x.:..:xx...x.x.x...x.x.:..:x.x..x..... 14M1I104M 75/118 63.6% 119/94230402 0.0% 1/118 0.8% 81962547 NA +3719 chr4 + 190214555 142954145 142954144 142954238 94 CCATGTGTATATGTATCTGTATCTGTATATATATATGTATCTGTATATGTATATGTATATGCATATGTATATGTATATGTATATGTATACACAC chr4 + 94230402 21109209 21109208 21109302 21109209 21109208 21109302 94 CTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC .::..x.::...x...x....:::::.....:x::....:..:..::.:.:..:x:..::x:x.:.........:....x.....:..:..... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% 121844936 68369619 +3328 chr4 + 190214555 142954185 142954184 142954242 58 CTGTATATGTATATGTATATGCATATGTATATGTATATGTATATGTATACACACACAC chr4 + 94230402 47135176 47135175 47135233 47135176 47135175 47135233 58 CTGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACAC ....:...:.::..::.:...x..xx..x......:......:...:........... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 95819009 NA +14091 chr4 + 190214555 142957004 142957003 142957303 300 ATTGCAATTTTATCTTTT--TGTTCTCCTTGTAAAAAATACAC-TGAAATGTATTGCAAGAATCCTTATAAAAGTAATAAAATAATGTAAAATGATCATAAAACCAATCACATATTTTATAGAAAATAGCAGAATAAAATCACTTTTTGTGAGAT--GTCAGATGCAAAGAAATTTATCACTTAAGATAAAACAATGTTCTGCTCTCTGTAAGCATTTAATCTCTTCAACTTCTTGTG-CCCTTGCAGGACTAGAAAGCCAATTTATGATAACCAATTTGAAAAGAC--TACTGATTACTGATTATGC chr4 + 94230402 31522259 31522258 31522566 31522259 31522258 31522566 308 ACTGTATTATTATTTTTTACTGTTCTACTGGTAAAAACAATGCATAAAATTTATTTCAAGTACCCATATGAAAGCAATAAAATAAAGTAAAATGGTCATAAAACCAATCGCATATTTCACAGAAAATAGGAGCATAAAATCACTTTGTGTGAGGTTCATTTGCTGCCAAGCAATTTATCATTTAAGAAAAGACAACTTTCTGCTGTGTTTAAGCGTCTAATGTGTTCAATTTCTTGTGACCCACGCAGGAATGGGAATGGGTTTTATTATTTCCAATTTCAAAAAGCTTTACTCATCACTGGTCACGC .:..:.x.x....:....--......x..x.......xx.::.-.:....x....x....x.:..x...:....:..........x........:..............:.......:.:.........x..x.............x......:.--:.:x.x...x...x.........:......x..:....:x.......x.x.x.....:.:....x.x.....:........-...x:......x.:.:..xxx:x.....x..xx.......x....::.--....x..:....:.:.:.. 18M2I23M1I111M2I81M1I48M2I19M 232/300 77.3% 308/94230402 0.0% 8/300 2.7% 111434745 78779810 +3448 chr4 + 190214555 142985203 142985202 142985259 57 TGCCTGAGGGATGGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 89868328 89868327 89868384 89868328 89868327 89868384 57 TGCCATATGGAAGGGTTTTGTTGTTGTTGTTTTGGTTCTTTTTTTGTTTGTTTGTTT ....xx.x...x..x................x.x...x...x............... 57M 48/57 84.2% 57/94230402 0.0% 0/57 0.0% 53116875 NA +3380 chr4 + 190214555 142985214 142985213 142985255 42 TGGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 + 94230402 14999526 14999525 14999567 14999526 14999525 14999567 42 TGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTT ...x....x..............:.................. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 127985688 62228867 +3030 chr4 + 190214555 142985217 142985216 142985263 47 TTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 59146418 59146417 59146464 59146418 59146417 59146464 47 TTCTTCCCGTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTTGTATTT ..:..x::...x...........................x.x.:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 83838799 NA +3102 chr4 + 190214555 142985221 142985220 142985268 48 TGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTCTC chr4 + 94230402 59675245 59675244 59675292 59675245 59675244 59675292 48 TACTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTACCGTTTTC .::................x...............x...:::x..:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 83309976 NA +3495 chr4 + 190214555 143001310 143001309 143001379 70 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAATTATA chr4 + 94230402 90030066 90030065 90030135 90030066 90030065 90030135 70 CAGATAACTGAAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAATTTTA ..:.x..xx:...x.......xxx:...::..............:.:.:............x.....x.. 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% 52971244 NA +3159 chr4 + 190214555 143001318 143001317 143001374 57 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:......x.x......:.:..:...:.....x....::.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 141506318 48708237 +3253 chr4 + 190214555 143001320 143001319 143001372 53 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 141506320 48708235 +3376 chr4 + 190214555 143001322 143001321 143001373 52 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:...............:.:..:...:.....x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 141506322 48708233 +3003 chr4 + 190214555 143001324 143001323 143001371 48 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:....x..........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 141506324 48708231 +3255 chr4 + 190214555 143015010 143015009 143015064 55 TCCTTGTTGTTGTTGTTGTTGTTTTTTATTTTGGTTTTTTGCTTGTTTGTTTGTT chr4 + 94230402 75136210 75136209 75136264 75136210 75136209 75136264 55 TTTTTGTTGGTGGTGGTGGTGTTTTTTGTTTTGTTTTTCTTTTTGTTTGTTTGTT .::......x..x..x..x........:.....x....:.x:............. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 67878800 NA +3392 chr4 + 190214555 143051183 143051182 143051299 117 TCACAAAACAAACAAACAAACAAACA--TAAAAAAAGAAAAACACGCACACACACACACAGAAAAGAAAAATGGCACATGGGAAATGCCTATCACACAGTAAACGCTCAGTGAGTGTTT chr4 + 94230402 79014264 79014263 79014373 79014264 79014263 79014373 110 TTACAACATAGAAAATAAAGCTACCAATGAAAAAAAGAAAAACACACACACACACACACAAAAAAACAACCCAGTAC--------TGCTCATTACTGGTTAAAC-TTTGGTAAGTGGTT .:....x.:.:.x..xx..:.x.x..--x................:..............:....:x..xx::.:..--------...::..:..xx:x.....-:.::..:....x.. 26M2I49M8D19M1D14M 76/108 70.4% 110/94230402 0.0% 11/108 10.2% 64036919 NA +3242 chr4 + 190214555 143051881 143051880 143052043 163 TTTTAAAG-TAGAAAAGGGAAGAAGGGAGAAAGGAGAGAAGAAAGGGAAAGGAAGGGAAGGGAAAGAAAGCGGGGAAGGAGGGAGAAAGGAAAGGAAGAAAGGAGGAAAGGAGTGAGGGGGAAAATGGGGAAAATAAAGAGAGAGATAAATAAGAGGAAATAAC chr4 + 94230402 69368720 69368719 69368873 69368720 69368719 69368873 154 TTGTAAAGCTGGATGAATGAAGAAAA-AGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAATG-----GTTTGTACCAGGGCCAGTGGCATAACG----AAAGCAAAAGAGAACAGATTAAAAGAAAATAAC ..x.....-.:..x:.:x......::-...:.::.....:.......::..:.x..x:::..:.......x::x..x:x.....x....:...x.-----:xxx.x.xx:.:.:x..x..x.x..:.----...xx..:.....:xx:.x...:..:....... 8M1I17M1D68M5D27M4D33M 97/153 63.4% 154/94230402 0.0% 11/153 7.2% 73683161 NA +3374 chr4 + 190214555 143051896 143051895 143051947 52 GGGAAGAAGGGAGAAAGGAGAGAAGAAAGGGAAAGGAAGGGAAGGGAAAGAA chr4 + 94230402 10675421 10675420 10675472 10675421 10675420 10675472 52 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAA .........:.........:.....:.:...::...x....::.:...::.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 132376475 57838080 +3320 chr4 + 190214555 143051908 143051907 143052006 99 GAAAGGAGAGAAGAAAGGGAAAGGAAGGGAAGGGAAAGAAAGCGGGGAAGGAGGGAGAAAGGAAAGGAAGAAAG---------GAGGAAAGGAGTGAGGGGGAAAATG chr4 + 94230402 75729438 75729437 75729545 75729438 75729437 75729545 108 GAAAGAACCTTAGAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGGAGAATTAAATGGGAGCAAGCTAAAGGCAGGGGGACAGAATCAAAAGGAGAATG .....:.xxxx...:..:x...:x....:.:...:.::....x.....:..:.......xx:..x..:..x...---------.:..:.x:..:.x.:::...:.... 74M9I25M 65/99 65.7% 108/94230402 0.0% 9/99 9.1% 67322470 NA +3000 chr4 + 190214555 143055296 143055295 143055357 62 AAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAGAAAAGAAAAAAGAAAAAAATGGGTT chr4 + 94230402 42428010 42428009 42428071 42428010 42428009 42428071 62 AAGAAAGCAAAAAGAAATAAAAGCATAGGTACATAAGATATGAAATAAAAAAAAAATGGGTT ..:...:x.....:...x.....x.x..:x.x.x....x.x....x..:............. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 100627286 89587269 +3663 chr4 + 190214555 143057952 143057951 143058034 83 CATGGTGGTACATGCCTGTAGTCCCAGCTACTAGAGAGGCTGAGGCGGGGGGATCACTTGAGCCCCTGAGATCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:..:.--......:.........x..:........x.xx.x.:.x.......:...xx:..x.:x:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 67024755 NA +3025 chr4 + 190214555 143061000 143060999 143061053 54 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACGGCATGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::........x.xx.x...xx:.x.........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 67027789 NA +3082 chr4 + 190214555 143098830 143098829 143098903 74 TATATATTATGTGTGTATGTGTGTGTGTGTATATACATATATATATGTGTGTGTATATATATATTATATATATA chr4 + 94230402 73100547 73100546 73100620 73100547 73100546 73100620 74 TATGAGTTACGTATCTAGTTGTATCTATGTACATGCGCACCTGTGTGTGTGTGTATAAATACATTATAACTACA ...:x:...:..:.x..xx...:.x.:....:..:.::.:x.:.:............x...:......xx..:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 69998283 NA +3349 chr4 + 190214555 143106287 143106286 143106352 66 AAACATTAAAAAAAAAAAAAAAAGGAAAATAAAATAATTGCTTCTGAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 42677600 42677599 42677665 42677600 42677599 42677665 66 AAACACTAACAAAGAAATACAGGCTAAGGTAGAACAAATGCATCTAAAGAAAAAAAAAAAAAAAAA .....:...x...:...x.x.::xx..::..:..:..x...x...:..:................. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 100428687 89785868 +3346 chr4 + 190214555 143124620 143124619 143124695 76 AAGTTATGTATTAGGGACAGTATTCCATTTCTTTTTTCTTTTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34825686 34825685 34825761 34825686 34825685 34825761 76 AATTGACATTTAAGAGGCAGTGCTTCATTTCATATTTCTTACTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTT ..x.x.::.x.x..:.:....::.:......x.x......x:.x.x....x:x.:.....:............... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 108298934 81915621 +3118 chr4 + 190214555 143134725 143134724 143134789 65 TTTTTCTTTCTTTTTTTCTTTCTTTTCTTTTTCTTTCTCTCCATCTATTATTTTATCTAACAAAT chr4 + 94230402 34301642 34301641 34301706 34301642 34301641 34301706 65 TTTGTCTTTTTTTTTTTCTCTCTCCTCTAAGTCAGTCTCACCATCTGTTTTTCTGCCTGGCAAAT ...x.....:.........:...::...xxx..xx....x......:..x..:.::..::..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 108833083 81381472 +30006 chr4 + 190214555 143185425 143185424 143186141 717 GGCCCTGGCC------TTGCAGCGTGGCGACAATGGACAAGATCCTGGAGGGCCTTGTGAGTTCCTCGCATCCCCTGCCCCTCAAGCGGGTGATTGTGCGGAAGGTGGTGGAATCGGCGGAGCACTGGCTAGACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGACCCGGCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGGCAGGTGGGGCACCAGGTGCTGGAGGCCTACGCACGATACCACCGGCCAGAGTTCGAGTCCTTCTTCAACAAGACCTTCGTGTTGGGCCTCCTTCATCAGGGCTACCACTCTCTGGACAGGAAGGATGTAGCCATCCTGGACTACATTCACAACGGCCTGAAGCTGATTATGAGCTGTCCGTCGGTGCTGGATCTCTTTAGCCTCCTGCAGGTAGAGGTGTTACGGATGGTGTGTGAGAGGCCGGAGCCGCAGCTCTGTGCCCGACTGAGCGACCTTCTGACCGACTTTGTGCAATGCAT-CCCCAAGG--GGAAATTGTCCATCACGTTCTGTCAACAGCTGGTTCGAACGATAGGCCATTTCCAGTGCGTGTCCACCCAGGAAAGAGAGCTGCGGGAATATGTCTCCCAGGTGACAAAAGTGAGTAACTTGCTGCAGAACATCTGGAAGGCCGAGCCTGCCACACTACTGCCTTCCCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACAGGTAAGGGTC chr4 + 94230402 31555995 31555994 31556720 31555995 31555994 31556720 726 GGCCCGGGCCGGTTCGCCGCCGCCCGGCCGCCATGGACAAGATCCTGGAGGGGCTGGTGAGCTCGTCCCACCCGCTGCCGCTGAAGCGCGTCATCGTGCGGCGGGTGGTGGAGCTGGCCGAGACGCCGCTGAGCCAGGCGCAGTGCCGCGCCATGTTCGCGCTCGGCACCCGGCTGGTGCTGCAGGGCCCCGACGCCTTCCAGCGGCAGGTGGGCCGCCAGGTGCTGGAGGCCTACGGGCGCTACCACCGCGCCGAGTTCGAGGCCTTCTTCAACCGGGGGCTGGTTCTCGTCCTCCTACAGCGCGGCTACGGCGAGCTGAGCTGCCGCGACCCGGCCATCCTCGACTACATCCAGGCGGGGCTGCGCCTCATCATGAGCTGCCCCTCGGTGCTGGAGCTCTTCGAGCTGCTGCAGGTGGAGGCCCTGCGGCTGGTGTGTGAGCGGCCCGCGCCGCCGCTCTGCGCGCGCCTCTGCCAGCTGCTGGGCGACTTCCCGCAGTGCCTGCCCCGCGGCAGGAAGCTCTCGCTCGCCTTCTGCCAGCAGCTGGTGCGCAGCATCGCCCACTTCCAGAGCCAGGGCAGCCGCGAGGCCGAGCTGCGCCTCTACGTCTCGCAGGTGACGCAGGTCAGCGGGCTGCTGCGCAGCGTCTGGAAGGCCGAGCCCGACACGCTGCTGCCCTCCCTGCAGGAGCTCTTCGCCGTCATCGCCGCCGCCGGTGAGCGCC .....x....------::..x..x:...x:.x....................x..x.....:..x..x..:..x.....x..x.....x..x..:......x:.........:::...x...xxx:x...:::.x...........x:x........:.xx..x:xx........x:.x...x......xx...x.:.................x.:....................x:..x........xx.x.........x...........x:.:xx:.x..x:.x.x......x..x.:x......x:.xxx...::.x.xx:x..:x::........x........:..x:xx..x...x:x..x..:........:..x...........x.....:::x..x........:....:x:.:...x...........x....x.x.....x......:..x..x..xx..x.x..x...:x......:x:...:...x.-....:x..--....::.x..xx..:.x.....:..:........x..x.xx..x.x...:......x..xx.xx..x..:x..::xx........xxxx..:.....x........:x.:..x..:::x:......:x.:.:................:.x...:..:.....:........:..:x.:..:..x:x....x.:x..:.x...:..x.:. 10M6I489M1I8M2I210M 508/717 70.9% 726/94230402 0.0% 9/717 1.3% 111629430 78585125 +10565 chr4 + 190214555 143187723 143187722 143187966 244 AACACCTTTGCTGCAATGA------------CTTTTTTTTTTTGTAAAGTGTTGTTCTTTTTAAATACTTG-AACCTACT----TGCCATGTTCC-CTTTTCTTTTTAATTGAAAAAACAGATGCATCATTTGAACCTTCTGTAGCATTGGCAAGCCTTGTGCAGCATATTCCTCTTCAGATGATTACAGTTCTCATCAGGAGCCTTACTACGGATCCAAATGTAAAAGATGCAAGTATGACCCAAGCCCTTTGCAGGTACT chr4 + 94230402 31557577 31557576 31557818 31557577 31557576 31557818 242 AACTTCATTGCTGCAACAAAGGAAAATGAAGCATAGTTTTCCTGTGGGAGTTTGTTCTT----GATTCTTACAACCCAACATGATGCCATGTTCAACTCTTC----------------CAGATACTCCATTTGAACCCTCTGTTGCGCTGGCAAGTCTTGTGCAGCATATACCTTTACAGATGATTACAGTACTCATCATGAGCCTTACTACAGACCCAAATGTGAAAGATGCGAGTATGACTCAAGCGCTGTGCAGGTACT ...x:.x.........::.------------.x.xx....::...::::xx........----:..x...:-....:.x:----..........x-..:...----------------.....:.x:..........:.....x..::.......:..............x...:.x..............x.......x............:..:........:........:........:.....x..x.......... 19M12I28M4D8M1I8M4I11M1I6M16D144M 180/224 80.4% 242/94230402 0.0% 38/224 17.0% 111630146 78584409 +10323 chr4 + 190214555 143195680 143195679 143195855 176 TTCAATAATGATTGTTTCATTTTCCTTCAATTTCAGAATGATTGACTGGCTATCCTGGCCATTGGCTCAGCATGTGGATACATGGGTAATTGCACTCCTGAAAGGACTGGCAGCTGTCCAGAAGTTTACTATTTTGATAGATGTTACTTTGCTGAAAATAGAACTGGTAAGTGGGA chr4 + 94230402 31561676 31561675 31561844 31561676 31561675 31561844 169 TTCATTAACCATT-TTTCATTATC------TTTCAGAATGATTGACTGGTTGTCTTGGCCTTTGGCTCAGCATGTGGAAACGTGGGTGATTGCACTGCTGAAAGGACTAGCTGCAGTCCAGAAATTTACTATCCTTATTGATGTCACTCTGATGAAGATTGAACTGGTATGTTGGA ....x...:x...-.......x..------...................:.:..:.....x.................x..:.....:........x...........:..x..x........:........::.x..x.....:...:..x....:..x.........x..x... 13M1D10M6D146M 142/169 84.0% 169/94230402 0.0% 7/169 4.1% 111634004 78580551 +8975 chr4 + 190214555 143197791 143197790 143197956 166 TTCTTAAGAAGGTGTCTTGTCTTATTTTGA--------AGGTTTTTAATCGACTTTGGTTTCCTCTTGTGAGACCTGGTGCTCTTGCAGTTCTTTCTCACATGCTGCTTAGCTTTCAGCATTCTCCAGAGGCGTTCCATTTGGTAAGTTATGACATAAACGTTCTA---CTTTGAAA chr4 + 94230402 31562048 31562047 31562224 31562048 31562047 31562224 177 TTATTAAAAGTGTTGTTTGTTTTGATTTGGTTTTTTTTAGGTCTTTAATCGACTTTGGTTTCCTTTAGTAAGACCTGGTGCCCTTGCTGTTCTTTCTCATATGTTACTTAGTTTCCAGCATTCTCCAGAAGCTTTTCATTTGGTAAGTTCCAGAAGAAGTGGTTCAGTTCTTTGAAA ..x....:.:x..xx:....:..:x....:--------....:.....................:.x..:...........:.....x...........:...:.:.....:..:..............:..x..:.............x:::x.x..::.x.::.---........ 30M8I128M3I8M 130/166 78.3% 177/94230402 0.0% 11/166 6.6% 111635743 78578812 +11039 chr4 + 190214555 143203379 143203378 143203570 192 CAGCATTGTTTATCCTTTTTTCTTTTCAGATTGTTCCTCATGTGGTTAATTTGGTTCATTCTTTCAAAAATGATGGTCTGCCTTCAAGTACAGCCTTCTTAGTACAATTAACAGAATTGATACACTGTATGATGTATCATTATTCTGGATTTCCAGATCTCTATGAACCTATTCTGGAGGCAATAAAGGTAT chr4 + 94230402 31564966 31564965 31565156 31564966 31564965 31565156 191 CACCTTTTTTTGTTCCTTTCCCATTT-AGGTTGTCCCACATGTGGTCAGCTTGGTTCACTCCTTCAAAAGTGATGGCTTACCTTCCAGTACAGCGTTTTTGATGCAGTTGGCTGAGTTGATACATTGTATGATGTATCATTATTCAGGTTTTCCAGAGCTCTATGAACCCATTCTGGAAGTTTTTAAGGTAT ..x.x..x...:.:.:...::.x...-..:....:..x........:.::........:..:.......:......::.:.....x........x..:..::.:..:..::.x..:........:....................x..x........x...........:........:.:xx.x....... 26M1D165M 149/191 78.0% 191/94230402 0.0% 1/191 0.5% 111638413 78576142 +14643 chr4 + 190214555 143206007 143206006 143206269 263 CTGTTTTTCTTCTTTATGACCTATAGGATTTTCCTAAGCCCAGTGAAGAGAAGATTAAGTTAATTCTCAATCAAAGTGCCTGGACTTCTCAATCCAATTCTTTGGCGTCTTGCTTGTCTAGACTTTCTGGAAAATCTGAAACTGGGAAAACTGGTCTTATTAACCTAGGAAATACATGTTATATGAACAGTGTTATACAAGCCTTGTTTATGGCCACAGAGTAAG---TTTAAACTTGAATCTTTTCATT-----TTAACTGTAGAAGTTG chr4 + 94230402 31565907 31565906 31566176 31565907 31565906 31566176 270 CTATTTTGTTCATGTTTCTCTTGTAGGATATGCCCAAGCCCAGCGAAGAAAAAATGAGGCTGATTCTCAGTCAGAGTGCCTGGACTTCTCAATCCAATTCTTTGCCATCTTGTTTATCTAGACTTTCTGGAAAATCTGAAACTGGGAAGACTGGCTTGATTAACCTAGGAAATACCTGCTACATGAACAGCATTATTCAGGCACTTTTCATGGCTACTGAGTAAGTCCTTTTTACCAG-CTCTTTTCATTGCAAGTTAACTATTGCAATTG ..:....x:.:x.x.x.xx.:.:......x.x..:........:.....:..:..x.:.:.:.......:...:..............................x.:.....:..:................................:.....::.x.................x..:..:........::....x..:..x:.x..:.....:..x.......---...xx..:x.-x..........-----......:.x.x.:... 225M3I10M1D11M5I16M 209/262 79.8% 270/94230402 0.0% 9/262 3.4% 111640100 78574455 +3284 chr4 + 190214555 143208620 143208619 143208676 57 AAATAACCTGTTCTTTTCTTTGTACATCTTTTTGTTGGGTCTTTTTTGTTTTCATGT chr4 + 94230402 75199098 75199097 75199154 75199098 75199097 75199154 57 AAGTAATTTGTCTTTTTTTCTGTGTTTTATTTTGTTGGGTTTTTTTTTTTTTCATGT ..:...::...::....:.:...::x.:x...........:......x......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 68009522 NA +7873 chr4 + 190214555 143209554 143209553 143209664 111 TCTCTTTCAGTTTCAGGAGACAAGTATTATCTTTAAATCTAAATGGGTGCAATTCATTAATGAAAAAATTACAGCATCTTTTTGCCTTTCTGGCCCATACACAGGTGAGTG chr4 + 94230402 31566722 31566721 31566832 31566722 31566721 31566832 111 TTTTTTTCAGTTTCAGAAGACATGTTTTATCTCTGAATCTAAATGGTTGTAATTCATTGATGAGGAAATTACAGCATCTTTTTGCATTTTTGGCCCATACCCAGGTAGGTG .:.:............:.....x..x......:.:...........x..:........:....::....................x...:..........x.....::... 111M 94/111 84.7% 111/94230402 0.0% 0/111 0.0% 111642832 78571723 +7072 chr4 + 190214555 143212284 143212283 143212427 144 CACTTCCTTATATTTTCTCAATTGCTCTCAAAAGAGGGAAGCATACGCACCTCGGATATTCTTTGAGGCTTCCAGACCTCCATGGTTTACTCCCAGATCACAGCAAGACTGTTCTGAATACCTCAGATTTCTCCTTGACAGGTA chr4 + 94230402 31567539 31567538 31567676 31567539 31567538 31567676 138 CACTTCTGT---TTCTCCCATATGCT---AACAGAGGGAGGCATATGCTCCTAGAATTTTCCTTGAGGCTTCCAGACCACCATGGTTCACCCCTCAATCGCAGCAGGATTGCTCAGAATATCTCCGGTTCCTGCTCAACAGGTA ......:x.---..:..:..xx....---..x.......:.....:..x...x.:..x...:................x........:..:..:x:...:.....:..:..:..x.....:...x.:..:..x..::....... 9M3D14M3D115M 106/138 76.8% 138/94230402 0.0% 6/138 4.3% 111644745 78569810 +58290 chr4 + 190214555 143213575 143213574 143214957 1383 CTGCAGGCTCCATGAAGAAGAAAAGATCTTGAAAGTTCAGGCCTCACACAAGCCTTCTGAAATTCTGGAATGCAGTGAAACTTCTTTACAGGAAGTAGCTAGTAAAGCAGCAGTACTAACAGAGACCCCTCGTACAAGTGACGGTGAGAAGACTTTAATAGAAAAAATGTTTGGAGGAAAACTACGAACTCACATACGTTGTTTGAACTGCAGGAGTACCTCACAAAAAGTGGAAGCCTTTACAGATCTTTCGCTTGCCTTTTGTCCTTCCTCTTCTTTGGAAAACATGTCTGTCCAAGATCCAGCATCATCACCCAGTATACAAGATGGTGGTCTAATGCAAG------CCTCTGTACCCGGTCCTTCAGAAGAA-------CCAGTAGTTTATAATCCAACAACAGCTGCCTTCATCTGTGACTCACTTGTGAATGAAAAAACCATAGGCAGTCCTCCTAATGAGTTTTACTGTTCTGAAAACACTTCTGTCCCTAA---CGAATCTAACAAGATTCTTGTTAATAAAGATGTACCTCAGAAACCAGGAGGTGAAACCACACCTTCAGTAACTGACTTACTAAATTATTTTTTGGCTCCAGAGATTCTTACTGGTGATAACCAATATTATTGTGAAAACTGTGCCTCTCTGCAAAATGCTGAGAAAACTATGCAAATCACGGAGGAACCTGAATACCTTATTCTTACTCTCCTGAGATTTTCATATGATCAGAAGTATCATGTGAGAAGGAAAATTTTAGACAATGTATCACTGCCACTGGTTTTGGAGTTGCCAGTTAAAAGAATTACTT---CTTTCTCTTCATTGTCAGAAAGTTGGTCTGTAGATGTTGACTTCACTGATCTTAGTGAGAACCTTGCTAAAAAATTAAAGCCTTCAGGGACTGATGAAGCTTCCTGCACAAAATTGGTGCCCTATCTATTAAGTTCCGTTGTGGTTCACTCTGGTATATCCTCTGAAAGTGGGCATTACTATTCTTATGCCAGGAATATCACAAGTACAGACTCTTCATATCAGATGTACCACCAGTCTGAGGCTCTGGCATTAGCATCCTCCCAGAGTCATTTACTAGGGAGAGATAGTCCCAGTGCAGTTTTTGAACAGGATTTGGAAAATAAGGAAATGTCAAAAGAATGGTTTTTATTTAATGACAGTAGAGTGACATTTACTTCATTTCAGTCAGTCCAGAAAATTACGAGCAGGTTTCCAAAGGACACAGCTTATGTGCTTTTGTATAAAAAACAGCATAGTACTAATGGTTTAAGTGGTAATAACCCAACCAGTGGACTCTGGATAAATGGAGACCCACCTCTACAGAAAGAACTTATGGATGCTATAACAAAAGACAATAAACTATATTTACAGGTAAGTTGGAAATA chr4 + 94230402 31568720 31568719 31570078 31568720 31568719 31570078 1359 CTTTAGGCTTCACGAAGAAGAGAGAACTTTGAAAGCATTGTCTTCAGCAAAGGCTGCTGAAAGTAGGAAGAATGAAGAGTCCCAGGCACAAGAAACTGTCCATAAAGCACAGGTATTTGCCGAAGCACTTTGTAAGGGGAGTGAAGAAAGAACTCTCATAGAGAGAATGTTTGGAGGAAAACTGAAGACTACTATATGCTGTTTGAACTGCAAAAGCACATCTCAAAAGGAGGAAGCTTTTACAGATCTCTCTTTGGCTTTCTGTCCTCCGACATCCTTGGAAAGCGCTGGTGTGAAATGTCTGGAA-CATT--CTGAAATAAAAGATGGCTCTGTGGTGCAAAGTAGTATTTCAGCAAC---TCCTGCTGGAGAAACACCTCCCAGTAGTTTGGAAATAAATGGCGGATGC----------AACGCAATTACAAATGAAGGAA-------------TCCTAAAGGATTCTGCTGAGCCAAA-----CTCTGAGCCAAAATCTGAATTTAACAAGGATCAAGATAGTAGGGATGTTTCTTCTGCGCTAGTGGGGAAAAACACCCCATCAGTAACGGACTTATTGAATTATTTTCTGGCACCTGAGATCCTTAGTGGAGACAATAAGTATTATTGTGAAAAGTGTGCCTCTCTACAAAATGCTGAGAAAACTATGCAAATCATTGAGGAACCTGAATACCTCATTCTCACTCTTCTGAGATTTTCATATGATCCAAAGTGTCATATAAGACGTAAAATCTTGGACAGCGTTTCTCTGCCACTTCTTTTGGAACTGCCAGTCAGAAGAGCAACGTCCCCTCTAGCTGTGGTTTCAGGAAGTTGGTCTGTTGACGTTGAGATTTCTGATATTGGAGAAAATCTTGCTAAAAAGCTGAAGCCCTCAGGTGCTGATGAAGTATCTTGCCCACAGCTGGTGCCCTATGTGCTAAGTTCTGTAGTGGTGCACTCTGGTGTATCCTCTGAAAGTGGACATTACTATTCATATGCTAGAAATGTTACTGGTTCAGGTTCTTCAGGACA---GTGTCACCAATCTAAAGCTTTTTCTTTAATTTCTACTCAGAATAAGTTGTTAGCAGAGGAGGGTCCTTGTACTGTTATAGAAAATGAGTTGGACACT---GAGATGCCAAAAGAATGGTTTTTATTCAATGACAGCAGAGTGACATTTACCTCATTTCAGTCAGTCCAGAAAATTACCAGTAGGTTTCCAAAGGACACTGCTTATGTTCTGATTTACAAAAAGCAAAATAGTACCTGTGGCT---ACAACACAAATTCAGCAAATGGACTCTGGGTGAATGGAGACCCTCCCCTACAAAAAGACCTCATGGATGCAATTACAAAAGATAACAAACTATACTTGCAGGTAAGATTAAGGTA ..x:.....:..:........:.::.::.......:x:x.x.:...xxx...x..x......x.xx.:.:x::::x..:x.::xxx:...:...::x.::x:.......xx:...:.x:.x..::.x.:.:...x::.x:::.:x..:.::...:.x.....:.:..................:x::...xx:...:.:.............::..:..x..x.....:.x......:...........:..x:.x..:..:......:.xx.x..:.......:.::xxx...xx..x:..::.x.-...:--.:::x...x.......:xx.x.::.....:------::..x.:.x.---....x.x.:....-------..........:x..x:x..:::.:.x...----------:..x..x..:::......::..-------------......x.::..:.:...xx.::..-----:....xx..x..---:....:.......:x..xx.x..:..::.....x:..:xx:x:.:..x:..x:...x...x..x........x......:.:.........:....x..x.....:....x...x..:..:x.:..............x...........:............................:x.................:.....:.....:...................x:....:....:.:...x.x.....:..:....::..x..x........xx.......::.......:.:....::x..x.---..:.xx..x::x.x....:............x..:.....xx.:x.....x..:.x..:..:...........::.:.....:.....x:.........:x..:...x..x.::...........x.::.......:..x.....x.........:................:...........x.....:..:...:.:..x:..x...::......x:x..---..::.....:...:.:...:.xx.x...::x..:x.:....:.x.x..::...x::::..x:....:x..:.x...x.x...x.x..x.....x.x.---..:...:...................:........:..............:..........................x..:.................x........x..xx.x..:.....:..:x.......:x:...:.---:::::.xx..::..:.x.:..........:.:...........x..:.....:.....x..:........x..x........:..:........:..:........x.x:.::.. 307M1D4M2D30M6I10M3D13M7I29M10D22M13D25M5D12M3I311M3I223M3D97M3D142M3D115M 961/1340 71.7% 1359/94230402 0.0% 62/1340 4.6% 111644855 78569700 +23778 chr4 + 190214555 143220279 143220278 143221416 1138 TTATTTTTAATTTTAGGAACAAGAGTTGAATGCTCGAGCCCGGGCCCTCCAAGCTGCATCTGCTTCATGTTCATTTCGGCCCAATGGATTTGATGACAACGACCCACCAGGAAGCTGTGGACCAACTGGTGGAGGGGGTGGAGGAGGATTTAATACAGTTGGCAGACTCGTATTTTGATCCTG-AGAGAGTCCAAAATGCACTGGTCACGAAAC-GTCTAATACT----ATGACTGTT-AAAATGTCAGACTATAACAAATATCTATCTTTTATTTTTCATTAGACCCTTATACTTCAAGAGAACACACTCAG---TGCTTGTTTTTATTTTCTTGACACATTTATTAACAAAATGCATCATGG---AAAAAAAAATCTACCTCTTAAAATTCCATTTGCTTTTATGGTTAGACATGCTTGACCAAAAATGTTCAGAAGA---AAATATGTACCTGGTCCCTAATTAAGCTGCGTTAAATTTGGTAGAAGCATTTAAATGGTCTATCTTCAGTTTTACTGAACAAAAAATGTAATTTATTTAGCATTCT--------TTATAAAAGAATTGATGCTAG-------AGGTAAAAAAAAATACTTGTTTTTAAAAAATCCTTTACGTCTTGTGTAATTACCCCATTATTAAATTCAAGTCCTTGAAAATCAACTAGAGATTATAAAGTC-TCTAAAGAAGGCAATAACAAAATTTATCAAGATATAGTACTTTTCAGTTTTTGTTTAGTGTCTTCAGCATCACTGTGTCTGTATTTCAAGTACAAATGTTTTTAAAAAGGATTCTTTATACATATGTGCTGAATTGATTTTAAGAAAGTTGCATGATCCTGTAGGAGCAACATTTTTACCTAAAAAATGCTAACTTTATAGTATTTCTAATTG-TTCAAGGATTTTAAAATTCTATTTCAGGGAGTATATCTTCTGTGGTTTTGAAGGAGGTGAGTTCTGTATGTGCCTTGCAGTACTGTAATTCAAAAATAGGAATCTTTGGCTGCAAAATTTTAATGAAATGTTAGGAAGTAA-----TTTTCGTGCTAACATTA-AAATTATAACTTTTTGAAAGGTAATAGATTTTCCAGAAGTAAAATCTGATGGTTCTAAATCAATCAATGTGATAGTTCATTTTTAACTCTTAGAAGAATTCAGAGGAAATT chr4 + 94230402 31572029 31572028 31573110 31572029 31572028 31573110 1082 TTTTCTTTCATTTCAGGAGCAAGAGCTTAGTGCTCGAACACAAGCACTTCAAGCTGCCTCAGCCTCGTGTTCTTTCCGCCCCAATGGATTTGATGACAATGATCCCCCGGGAAGTTGTGGACCAGCAGGTGGAGGAGGAGGGGGTGGATTCAGTACTGTTGGTAGATTAGTCTTTTGACTAGGCAGACGACCTGGAATATACTGGTTCTAAAGCAGCCTGGTACCGCTGAGGACAGTTCAACATTTTAACTTAT----TGTACGAAGTTTTGAGACTTCAT-----CCTTG---TTTGAAAGCAAATGTTAAGGCTTTCTTGCTTATGTTTTATT------TGAAATAAATAAGCGCATAATGGAAAAAAAAAAAAACTACCTCTTAAAAATTCAATTGCTTTTATAGTAAGATATGCTTGCCCAAAAG---ACAGAAAATTGAGATTTTTAAGTAGGTTCTGACACCACTGCATTAAA-----CAGATACGTTTACATCATTTTCCATAGACCTTACCCACTGAATGAAGCAAGTTCATTTTGACTCTGGTGGCGCTGATGAATG------TGCAAGTCCTTTCAGATGGGTTAAACTACATGC------ATAGTCTCCCAC-----------TCACCTTATTTACAAATCTGATACCTTTATAATT-TCTAGAGAGGATGCAATCATATAATGAAGGCAATAACTTCACATGACTTGATTCAGTACTTTTA-----------AAAATATTCAA------------TATATTTACAGTACGAGTGTAAAAAAGAAAAA-----TATAAATATTTGCAAAGCTATTTTCCACAAAAGTGCATG-TTCTGTGGGAACAGTGTTTTTAAATAGAA---GTTAACTTTGTAGCATTTTTAATTGTTTTGAGAGTTTTAAAAT--TATTTCAGGGAATATATATGCTATGTATTTGAAAGGAAGAGATTCTGTATGTGCCTTGCAGTACTGTAACTTAAAACAAGCTTTTTGAGACTGCAGAA----AAGGAAGAATCTAGTGGTAGTCAATTTTTCTTGTCAGTGTTAGGAATCAAGTGTTTTTAGAAAGCTATTTGGTTTCCAGAAGTAAGA-------GTTTAAAATGCAGTAAGTTTGTCCATTATTTTTGAATCAGAGCAATATACCTAGAGAGTT ..x.:...x....:....:......:.x.:.......:.x.::..x..:........x..x..:..:.....x..:..x....................:..:..x..:.....:.........:.x........:..x..:..x.....:.:...x.....:...:.x..x......::xx.-...x:::.:::...::......:x::..:.-.:..::...:----.x...x...-..x..x.:.:x:...----x:..:xx.x:...x.xx:.....-----....:---..::.:..x.x.:::.x..---.x....:..x.:....x..------.xx.x...xx..::....x....---.........x.............x.:..x..........:..x...:.......x......:---x.....:.---.:..x.x..xx.:.x::..:.:xxx:....:.....-----:...x:.:....x..x:.:.x:.x.x::::....:x.x::..x:.x.:..x..xx..xxx.:...--------.x..:..x.------...x..-------..:.:::xx...x...x..:------.x.:..::::..-----------.:...::...xx:....:::.xx....x.x...:-x.......xx..:x.:..-.x...x............xxx.:x.:x.xx...x:.........x-----------.:x:.x....:------------.:.....xx.....:.:...xxxx..:..::.-----....x....x...x:.::.:x...:x.x...:x......-.:....:...:..:::......xx..:..---.:.......:...:....:......-..::..::.........--...........:.....x.x..:..xx......:.:::x:::...........................:.:....xx..xxx.:.xx.:.....:..----..x...:x:.:x:.x:...:-----.....x..::.:::...-:...:.x:xx.....::..:.:x..xx:x.............:.-------...:x....xx.x:..xx.x:.xxx.:......:.x..xx..x.:x..x.xx..::.:.. 183M1I30M1I10M4I9M1I15M4D23M5D5M3D19M3I19M6D23M3I62M3D8M3I36M5D65M8I9M6D6M7I20M6D12M11D34M1D18M1I45M11D11M12D32M5D39M1D29M3D25M1I17M2D98M4D20M5I17M1I44M7D60M 696/1043 66.7% 1082/94230402 0.0% 134/1043 12.8% 111648250 78566305 +3683 chr4 + 190214555 143228994 143228993 143229067 74 GTGCACCTGTAATCCCAGCTACTCGGAAGTCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........:.:...x.....x.xx.x...x..........::.:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 67195790 NA +3257 chr4 + 190214555 143255487 143255486 143255569 83 CATGGTGGTGGGTGCCCGTAATCCCAGCTACTTGAAAGGCTGAAGCAGGAGAATCGCTTGAGGCCAGGAGGCAGAGGCTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.:--...:.:....................:x.xx.x...x.:.....:x....:..x:xx:.....::. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 67222290 NA +3031 chr4 + 190214555 143255609 143255608 143255663 55 AGGGCAAGACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAATATCT chr4 + 94230402 62017718 62017717 62017772 62017718 62017717 62017772 55 AAGGCAATGCTCTGAGAAAAAAAAAAAAAAAAAAGCAACAAAAAGTCAACTATCT .:.....x:.....xx..................:x..x.....x.x..x..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 81237891 NA +3047 chr4 + 190214555 143262454 143262453 143262535 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGGGGCTGAGGCAGGAGAATGGCATGAACCCGAGAGGTGCAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.:::.......x.xx.x...xx:.x.......:::..x.x::..:..:.. 6M5D71M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 67229253 NA +3140 chr4 + 190214555 143262570 143262569 143262647 78 GCGACAGAGCAAGACACCATCTCAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAGAAAAGAACAATTAGCACAGTTC chr4 + 94230402 88382708 88382707 88382781 88382708 88382707 88382781 74 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCA----CACAGCTC ..:.x:..........x.x.........::.:...:....:....::x.x....:x.x..x...x.----.....:.. 66M4D8M 54/74 73.0% 74/94230402 0.0% 4/74 5.4% 54879862 NA +3180 chr4 + 190214555 143282960 143282959 143283018 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 67249754 NA +3244 chr4 + 190214555 143289320 143289319 143289372 53 GTAATCCCAGCTACCTGGGAGACTGAGGCAGGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033212 76033211 76033264 76033212 76033211 76033264 53 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.:........:..::..:.....x.xx.x...x................ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 67256108 NA +3268 chr4 + 190214555 143298334 143298333 143298375 42 AAGGGGTTTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTT chr4 + 94230402 60657968 60657967 60658009 60657968 60657967 60658009 42 AACGGGTTTTTTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTT ..x...........x..x........................ 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 82640366 NA +3107 chr4 + 190214555 143298337 143298336 143298380 44 GGGTTTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTT chr4 + 94230402 90070611 90070610 90070652 90070611 90070610 90070652 42 GGGTTTTTTTGTTTGTTTATTTTTGTTTTGGTT--TTTTGTTTT ..................:...........x..--......... 33M2D9M 40/42 95.2% 42/94230402 0.0% 2/42 4.8% 53227726 NA +3044 chr4 + 190214555 143302185 143302184 143302252 68 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGCTTCTGGTATAAAGAGCAGGGATTCTTAACTTGAG chr4 + 94230402 15283508 15283507 15283575 15283508 15283507 15283575 68 CTTAGGAAAGAAAAAAAAAAAAAAAAAGAGTATTTTCTGGAGTAATAGGCAGCGTTATTTCAATTAAG ..:.::...:.................:..x.x:......x:...x::....x.x.x:..x.x..:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 128018677 62195878 +3866 chr4 + 190214555 143304983 143304982 143305065 83 CATGGTGGTGGGCGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--.:....:...........::........x.xx.x...x...........:.:..x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 67271786 NA +3608 chr4 + 190214555 143305308 143305307 143305386 79 GTGGCACATGCGCGTAGTCCCAGCTACTTGGTAGGTTGAGGCAGGAGAATTGCTTGAACCCAGAAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..--..:.....:...........:x...:....x.xx.x...x::..............x:xx:.....:.. 8M2D69M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 67272107 NA +3377 chr4 + 190214555 143314880 143314879 143314938 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...x::.........:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 67281674 NA +3148 chr4 + 190214555 143318423 143318422 143318494 72 GCACATGGAGTCCCAGCTACTCGGGAAGCTGAGACAGGAGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:..x...:.........:.::.:......x.xx.x...x::........x:.:..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 67285217 NA +3392 chr4 + 190214555 143318867 143318866 143318929 63 GGCTCTTTTTTTTTTTTTTGCATGGTTTCCAATTATATT-ACTGAGAACATATCTGGCTACTTT chr4 + 94230402 91238570 91238569 91238633 91238570 91238569 91238633 64 GGCTTTTTTTTTTTTTTTTTTATGGTTTTCAATTATGTTAACTGAAAATAGATATAGATCCTCT ....:..............x:.......:.......:..-.....:..:.x..x.:.x.x..:. 39M1I24M 50/63 79.4% 64/94230402 0.0% 1/63 1.6% 52080297 NA +3061 chr4 + 190214555 143322779 143322778 143322839 61 CAGAGATTCTTAATTTTGAGAAAGTTCAATTCGTCATTTTTTCCCTTTTTTTCTTTTTTAA chr4 + 94230402 85274395 85274394 85274455 85274395 85274394 85274455 61 CAGAGAACCCTAATACTGATAAAGTTTGGGGTGTGTTTTTTTCCTTTTTTTTTTTTTTTAA ......x:.:....x:...x......:::xx:..xx........:.......:........ 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 58048384 NA +3530 chr4 + 190214555 143332485 143332484 143332554 70 CGTGGTGGTGCACGCCTGTAATCCTAGCTACTTGGGAGGCTGAGACAGGAGAATAGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::..........--....:.:.:.........::........x.xx.x...xx:...........:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 67299288 NA +3083 chr4 + 190214555 143335209 143335208 143335267 59 AAATTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGAC chr4 + 94230402 84739523 84739522 84739581 84739523 84739522 84739581 59 AAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTTGAC ......:...:..::.:::x:.:x.:x:.............x.x............... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 58595686 NA +3092 chr4 + 190214555 143335214 143335213 143335264 51 TCCTTCCTTCCTTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907959 56907958 56908009 56907959 56907958 56908009 51 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTT ...x:....:.:..:.:.x:::.........:..............:.... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 86427255 NA +3308 chr4 + 190214555 143335215 143335214 143335261 47 CCTTCCTTCCTTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907964 56907963 56908010 56907964 56907963 56908010 47 CCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ....:.:....:.x.::...........:............:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 86427251 NA +3116 chr4 + 190214555 143335223 143335222 143335276 54 CCTTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGACGGAGTTTTG chr4 + 94230402 45847281 45847280 45847334 45847281 45847280 45847334 54 CCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTTCTG ....:.x.............:................:::x..:xx.x...:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 97487942 92726613 +3044 chr4 + 190214555 143335225 143335224 143335258 34 TTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554023 6554022 6554056 6554023 6554022 6554056 34 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ....:............................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 136781202 53433353 +6530 chr4 + 190214555 143337168 143337167 143337354 187 GGAGCCCGAGACGCGCG----CACCATGAGCGGTGGTGAAGTGGTCTGCTCCGGATGGCTCCGCAAGTCCCCCCCGGAGAAAAAGTTGAAGCGTTATGTAAGTAGAGCTGCGGGCACCACTCCGCGGGCCTCGGCGTCCACACCCCTCCCCAGTCGGCTCGCCGGCGGCTGCAGCTGGCCGCGCGCGGGGC chr4 + 94230402 31624757 31624756 31624933 31624757 31624756 31624933 177 ggaggacgaggCGGGCGGCCCAGCCATGAGCGGCGGGGAAGTGGTCTGCTCGGGCTGGCTCCGAAAGTCCCCACCGGAGAAGAAGTTGAAGCGCTACGTGAGT----------GCCCCCTTCCCCTTG---CGGCTCTCCCGCTcc-ccccgcccggcccggcctccgccgcgcggtgcctcccgccgggc ....xx....:..x...----x:..........:..x..............x..x........x........x........:...........:..:..:...----------..x..x:...x.xx.---....x::.x.:.:..-....:x:....:..x.xx.x..:..:xxxx...x.x...x.... 17M4I82M10D15M3D15M1D44M 128/173 74.0% 177/94230402 0.0% 18/173 10.4% 111712411 78502144 +7283 chr4 + 190214555 143358911 143358910 143359101 191 AATGAAGAGGCTGCCTTCAGGTGTAGTAAGGTTTAACT---TCTATCCCGGTTCCAACTTGTCCTGCTGTCAGCTTGCTCCTTAGCTCCCTGGCTTATTTACATATTGTATAATCCAGACTGGCTTGTCCCGTTTGGTAGGT-TGGTTATAAA-CTGCAGAGCTAAGTAAATGTGTGATAACATTTTAAATGGTAT chr4 + 94230402 31642095 31642094 31642279 31642095 31642094 31642279 185 AATGAAGAGGCTAC--TCAGGTGTAATGAGGTTTAACTAATGCGACCAATGTTTCAACTTGTTCTACTGCATGTTTGCTC--TAA------GGCTTGTTTACGTATTGTATAAGCCAAACTCGCCTGTCTTGTTAGGTGAGTGTGGTTAAAAGTCTGCAAAGCTAAGTGAAGTAGTG-TAATATCTTACGTAGCAT ............:.--.........:.:..........---x.x.:.xxx...:........:..:...:xx.:......--..:------.....:.....:..........x...:...x..:....::...x...::..-......x..:-.....:........:..xxx...-...:..:...x:.:.:.. 14M2D22M3I39M2D3M6D51M1I10M1I23M1D18M 139/180 77.2% 185/94230402 0.0% 16/180 8.9% 111716816 78497739 +3211 chr4 + 190214555 143373829 143373828 143373877 49 CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAAATAAATAAATATATATA chr4 + 94230402 18807331 18807330 18807379 18807331 18807330 18807379 49 CTCTCTCTCTTTCTCCCTCTCCCTCCCTTAAAATAAATAAATAAATGCA ..........:....:.....:...:..xx.............x..::. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 124566498 65648057 +3537 chr4 + 190214555 143400839 143400838 143400911 73 TGCACCTGTAATCCCAGCTACTTAGAAGGTTGAGACAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:..........::....:....x.xx.x...x..........::.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 67367634 NA +5217 chr4 + 190214555 143403267 143403266 143403392 126 CCTTCAACACTTCTCTCCTTGTCCTCAAGCATTAAATCATGCATATACAATACAAATCCTTACAGCCGCTGTTATTTTCAGTCCATTGTATCTATTTCCTGTTGACCGAAGGTTATGAGGCTTGGG chr4 + 94230402 31671107 31671106 31671221 31671107 31671106 31671221 115 CTTTCAAAATCTTAAACCCACCCCTCATGTATTAAATCATTCT-----------AAGTGTTACAATTGCTGTTATTTTCAGTCCATTGTGTCTACTTCCTGTTGGTCAAAGGTTACGAGGATAGGG .:.....x.::.:xxx..:xx:.....x.:..........x.x-----------..x:x.....:::......................:....:.........::.:.......:....x.x... 43M11D72M 85/115 73.9% 115/94230402 0.0% 11/115 9.6% 111732160 78482395 +7009 chr4 + 190214555 143403345 143403344 143403530 186 CAGTCCATTGTATCTATTTCCTGTTGACCGAAGGTTATGAGGCTTGGGTAGTGTAGAGGGAGATGAAAAGTTGACAGAAAAAAGAAAGCTGGGCTCATTTTAGGGGCAAAAC-ACCATA-AAATGGGCAAGATGGCACTTGGATTTATTGAAAACAAAAAGAAATAAATAGGCAATCGTCTTTCTTGT chr4 + 94230402 31671381 31671380 31671568 31671381 31671380 31671568 188 CAGGCCATTGTGTCTACTTCCTGTTGGTCAAAGGTTACCATTATAGGGTGGTGTATAGTGAGATGGAAAGCTGACAGGACATAGAAAGCTTTGCTTGTTTTGGGGTAGACACAACTACAGAAATGGCCAGGACATTGCTTAAGTTTTCTGAGGACTTAAAGAGGTAAACTAGAGAAAACTGTTCTTGT ...x.......:....:.........::.:.......:x.xxx.x....:.....x..x......:....:......:.x.x........xx...::....:...xx:.x..-..:.:.-......x..:..::x::...:::...x:...::..xx.....::....:x:.x:.xx:::x....... 112M1I6M1I68M 126/186 67.7% 188/94230402 0.0% 2/186 1.1% 111731964 78482591 +3441 chr4 + 190214555 143404621 143404620 143404690 70 TGCACGTGTGGTCCCAGCTACTGGACAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGGTTGATGCTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .........:..:.........x..x........x:xx.x.:.x::.....:.....:..x..x:x.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 67371416 NA +16459 chr4 + 190214555 143407542 143407541 143407854 313 AGGCATTGTTCTGCATTATTTTCAGTGTATTCTTTTGTTTATATTACTAAGCTAAAGTTAGCTCGGATAGCACAAGGCTAGAAAATGGTGACAACAGTTTGAAAACAGGAAATTTTAGGCTTCTGTGTGTTTGGAACAGATGATCATAATGATAGAGCCAGTGGAGTGGAAACTTCCACCGAGCCTGTTTTTTCCTTATTTTGCTCTATGAGAAAAGATGGTGCTTCCTGGAAAACAA--CTCAAGTATTTTAAAGCAAATGGT----TTTCCTTTGTCCCTGCTTCATG----GTTAATTTGTTTTTCTTTATTTTATTTAC chr4 + 94230402 31675375 31675374 31675691 31675375 31675374 31675691 317 AAGTATTGTTCTGCTGTATTTGCAGTGTTTTCTTCTGTTTAT-TTAACAAGCTAAAGTTAGAATCGACAGCACAAGACTAGAAAATGGTGACAATAGTTGGAAAACAGGAAATTTTGGCCTTGTGTGTATTCGGAACAGATGATCAGGATGAT--GGCCAGGAGAGTGGAAACTTCCACTGAGACTGTTTTTTCCTTATTTTGCTCAGTGAGAAAAGATGGTGTTTCCTGGAAAACAAGTCTTAAGTA-TTTAAAGAAAGTCATAATGTATCCAGTGT--TTTCCTCATATCACGTTTGTTTGTTTTGCAGCTATCTGTTTAC .:.:..........xx.....x......x.....:.......-...x:.............xx:x..:........:.................:....x................:.x...x.....:..:..............x:.....--:.....x:................:...x......................x:...............:..............--..:.....-.......x..:.x:.----.x...xx...--:.x.:....:----...x:........x.xx:xx.:.:..... 42M1D110M2D83M2I8M1D15M4I10M2D10M4I29M 253/307 82.4% 317/94230402 0.0% 16/307 5.2% 111732167 78482388 +27374 chr4 + 190214555 143411560 143411559 143411986 427 TTGGCAAGGCAGTGTACGGCTTTCTCTGGAGCTACCAAGGCAGCAAGGATAAAAATAGGACAAACTTTAAGAATCTCAGATATTTTCAGATAACAAAGACTGATTTATGTGGGCCCGTTTTGTGCTCTGACAAAACATAGAGACGCTTTTGTGCTGTGATTAGCAAGGGTGCTGATGTCAGTTCTCTTGTCGAGCATCAAGCTTTATTCTGTGGCTAAATTGTGCTTTGTACCATAATCCAGAGAACCTTTGTATCTGCCTTATTAAAGTGTGTAGTTTATGTAATTGCTTTTGTTTTCCAGCTTAATCTGTGCCAGATTCAATGAGGGTGACTCATTTTGTGACTGAGACAAACATTCACATTTGGACCATGTTAAAAATAAATAAATA-AATGGCAGGTGCTGCTTGGCTAAATTCTGTGTTTTAA chr4 + 94230402 31678573 31678572 31678998 31678573 31678572 31678998 426 TCAGTGAGGCAGTATACAGCCTTCATTACAACAGCAAATACTGAAATGTTAAAAATAGATCAAGCTTTAAGAATCCCAGATATTTTCAAATAACAAAGAGTAATTTATGTGGGCTCATTTTGCACTTTGACAAAATATAGAGGCGCTTTTGTACTATGATTAGCAAGGGTGCTGATGTCAGTTCTCTTGTCTAGCTTTTAGCTTTATTCTGCTGCTAAATTGTGCTTTGTACTGTAATCCAGAGAACCTTTGTATCTGCCTTATT--AGTGTGTAGTTTATGGAATTGCTTTTGTTTTTGAATATAATCTGTGCCAGTTCCAGTGAGTGTGACTCATTATATGACTGAAATAAACATTCACATATGTACGATGTGAAAACTCTTCAAAAATAGTAGCAGGTGCTGCTAGGCTAAATTCTGTGTTTTAA .::.::.......:...:..:...x:.:x.:.x:.x..x:.x.x..x.x.........:x...:...........:............:..........x.:............:.:.....::..:........:......:.........:..:...................................x...x.:x............:x...................::...............................--...............x...............:x.::x.............x.:..:....x..........x.:.......:.:............x..x..x....x....x.xxx:...x.-.:.:............x.................... 265M2D123M1I37M 353/425 83.1% 426/94230402 0.0% 3/425 0.7% 111732987 78481568 +23810 chr4 + 190214555 143415457 143415456 143415778 322 TATTTTTGTTTTGT----TTCTAGGCATGGAAGAGGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTGGAGATCCAGATGTTTTGGAATATTACAAAAATGATCATGCCAAGAAGCCTATTCGTATTATTGATTTAAATTTATGTCAACAAGTAGATGCTGGATTGACATTTAACAAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACACTATTGACCGGATTTTCTACTTGGTAGCAGACAGCGAGGAGGAGATGAATAAGTGGGTTCGTTGTATTTGTGACATCTGTGGGTTTAATCCAACAGAAGAAGGTAAGTT chr4 + 94230402 31681836 31681835 31682161 31681836 31681835 31682161 326 TATTTTTCTCTTATGAATTTTCAGGCATGGAAGAGGAGATGGTTTGTGCTTCGGAGCGGCCGTTTAACAGGAGATCCAGATGTATTGGAATACTACAAAAATGACCATGCCAAGAAGCCTATCCGTATTATTGACTTAAACTTGTGTCAGCAAGTGGATGCTGGATTAACATTCAACAAAAAAGAATTTGAAAACAGCTATATTTTTGACATCAACACTATAGACAGAGTCTTCTATTTGGTGGCAGACAGCGAGGAGGAGATGAATAAGTGGGTTCGATGCATCTGTGATATCTGTGGGTTCAACCCTACAGATGAGGGTAAGTT .......x.:..:.----..::......................:...:.x..x..:...........x..............x........:...........:.................:...........:.....:..:.....:.....:...........:.....:...........:..............:........:...........x...x.::.:.....:.....:...................................x..:..:.....:...........:..:..x.....x..:........ 14M4I308M 281/322 87.3% 326/94230402 0.0% 4/322 1.2% 111733621 78480934 +3810 chr4 + 190214555 143423721 143423720 143423877 157 GAGCCAGATCGCGCCACTGCACTCCAGCCTGGGCAACAAAGCGAGACTCCATCTCAAAAAAAAAAAAAAGTGTATATATATATATATATATATATATATATATATATAT---ATATATATGTC---TTCACGTGCTATGAAAAGGATATTTTTTTTTTAAAAA chr4 + 94230402 85548374 85548373 85548522 85548374 85548373 85548522 149 GAGACAAACCAGACCATTG---TCACATCTGGACAATCAA---AAGCTCT---TCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTTAGTTGTTGTAAAA-----CTTCTTGTTTCAAAAA ...x..:.:.:x:...:..---..xx::....:...:x..---.::...:---...............::xx.....:...:.:.:.::...:..........x.....---.:..:x..:..---..:.xx..:.:.:...-----x..:..x...:..... 19M3D18M3D7M3D56M3I11M3I16M5D16M 100/143 69.9% 149/94230402 0.0% 20/143 14.0% 57875347 NA +3093 chr4 + 190214555 143423776 143423775 143423827 52 AAAAAAAAAAAAAAGTGTATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548422 85548421 85548473 85548422 85548421 85548473 52 AAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...........:.:x.:...:...:.:.:.::...:..........x..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 57875354 NA +11944 chr4 + 190214555 143433432 143433431 143433725 294 TGTTTTTCCAAAAATTGTTTAACTGTGATAGACGTGATAGTTAAACTTTGGTGTTGCAGATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCACCAGCTGATTTACCTTTAGCTATAAATACAGCACCACCATCCACCCAGGCAGATTCATCCTCTGCTACTCTACCTCCTCCATATCAGCTAATCAATGTTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTACCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGAACCCACCAGGTAAATTAT chr4 + 94230402 31690779 31690778 31691054 31690779 31690778 31691054 276 TGTTGTTAAAACCATTTCTTAACTGC-ATAAA----GTAGT-ATGCTTCTGTGTTGCAGATGCTGTGAAGCCCCCGGTCAGTTCTTTACAAGCATCTGCTGAGTTACCCTTGCCCATCAACACTTCACCTCCTTCCATGCAAGCAGAATCTTCC---------CTACCTCCTCCTTATCAGCTTATTAACATCCCCCCA---CTGGAGTCTTCCTCTAGTCAAGAAGATCCTCAGGACTACCTACTGTTAATAAACTGCCAGAGTAAAAAACCTGAACCTACGAGGTAAGTTAT ....x..xx..xx...x:.......:-...:.----:....-.x:...:x...........x..........x..x.x...:............:.x.....x.....:..:x.:..x..:..xx....x..x....:x..:.....x..x...---------...........x........x..:..::.:..x...---.....:x..:::xx:.x...:..:........:........::..:.x..x.....:..:..:..:..:..:.....:..x......:.... 26M1D5M4D5M1D112M9D36M3D92M 206/276 74.6% 276/94230402 0.0% 18/276 6.5% 111742653 78471902 +8845 chr4 + 190214555 143434060 143434059 143434211 152 CTCCATTTCTTATGTGATTGTAAACCAGCCAAGGGTCATCTTTTGTTTCTGAAGAAGGAGAGGAATACCTTCTACTAGAAGATTTTGAAAGCAAAACGATTCCATTGCAGTGAGTGTGTTGTGGTGGTTTT--GGATCTGTGTGAGAAATTAAT chr4 + 94230402 31693666 31693665 31693819 31693666 31693665 31693819 154 CCTCATTTTTCTTGTATTTATGAAACAGCCAAGGGTCACCCTTTATCTCTGAAGAAGGGCAGGAATACCTTCTCTTAGAAGATTTTGAAAGTAAAAAGGTTCCACTGCAGTGAGTGAACAGTAGCTGTTCTTGGAACGTGTGTGAGAAATTAAT .::.....:.:x...:x..:.:..x.............:.:...:.:...........:x.............x:................:....x.:.....:...........x::x..:.:x...:.--.:.:x................ 131M2I21M 119/152 78.3% 154/94230402 0.0% 2/152 1.3% 111740394 78474161 +36262 chr4 + 190214555 143437966 143437965 143438609 644 TTGTTTATTCTGTCATTAACAAT-TTTTATT----------------TAGAACGCATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAGACTGCAATGATAACGTCCCTTCTCATAAAAATCCTGCTTCCTCCCAGAGCAAACATGGAATGAATGGCTTTTTTCAGCAGCAAATGATATACGACTCTCCACCTTCACGTGCCCCATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGCCCAGGAGTTATTCCCATGATGTTTTACCAAAGGT---GTCTCCATCAAGTACTGAAGCAGATGGAGAACTCTATGTTTTTAATACCCCATCTGGGACATCGAGTGTAGAGACTCAAATGAGGCATGTATCTATTAGTTATGACATTCCTCCAACACCTGGTAATACTTATCAGATTCCACGAACATTTCCAGAAGGAACCTTGGGACAGACATCAAAGCTAGACACTATTCCAGATATTCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGTAGTATCCCACGCACCGCCTCAGACACTGACAGTAGTTACTGTATCCCTACAGCAGGGATGTCGCCTTCACGTAGTAATACCATTTCCACTGTGGATTTAAACAAATTGCGAAAAGGTCAGCTCT chr4 + 94230402 31698571 31698570 31699234 31698571 31698570 31699234 664 TTGTTTCCTTTGTGCTCATCAATGTTTTAATCTCTTGATCTTGTGCGTAGATCTCATGCTGACTCTGCAAAATCCAGCTCTTCTGAAACAGACTGCAATGATAACGTGCCCTCCCACAAAAACCCCGCTCCATCCATGAGCAAGCAAGCTGTGAATGGCTTTTTTCAGCAGCAAGGTGTCTATGACTCTCCGCCTTCTCGTACTGGACTACCATTGGCAGACTCCAGCCTTTATAACCTGCCTAGGAGTTACTCACAAGATGTTTTACCGAAGGCAGCGTCTCCGACTGGGACTGATGCAGAAGGCGAGCAGCATGTGTTCAATACCCCATCAGCAACATCGTCATTAGACGCACAGATGAGGCACATCTCCATTAGTTACGACATTCCCCCCACACCTGGAGGTACTTATCAGATTCCACGAACTTTTCCAGAAGGAACATTGTCTCAGACTTCAAAATTGGAGACTATTCCAGATATTCCTCCACCTCGGCCACCAAAACCTCACCACGCTGCGGATCGATCTCCTGTGGAAACATGTAGCATTACTCGCACAGCTTCAGATACTGATAGTAGCTATTGTATCCCTACAGCAGGAATACCACCCTCACGCAGTAATACCATTTCAACTGTAGATTTGAATATCTTTCGTAAAGGTCAGTGCT ......x:.:...xx.:.x....-.....x.----------------....x.x........:.............x..............................x..:..:..:.....:..:...:.x...xx......:..x.xx:.......................:xx:.x..:........:.....x...:.:xx.::xx.x.::.:x.......................:........:..x..x...........:....:---......:x.x:.x.....x.....x..x..:.xx:....x..:...........x.x:......xxxx....x:.x..:........::.x..:........:........:..x........x::.....................x..............x...xxx.....x.....::.:..x................................:.....x..:.xx...xxx..:.................:.....:..:x.x.....x..:.....:.....:.....:..:.................:..::.:..:.....:..............x.....:.....:..:.xx..x..x.........:x.. 23M1I7M16I228M3I386M 509/644 79.0% 664/94230402 0.0% 20/644 3.1% 111739395 78475160 +29213 chr4 + 190214555 143439697 143439696 143440395 699 GTGTGTATGCATATGTATAATGAGAGAAAGATAATAGGTCATCCCAATGACCCTGAGA--GCTGGC----AAAGATGGGAATAAATGTTGATAG----------TTTGTTCTT--TATTTTAGATGCTAGTTCTCAAGACTGCTATGATATTCCACGAGCATTTCCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTGTAAGTATAAT-TGACCTT---------------GGCATCATCAAG----TGTATTTCATTGTCTAAA--------------TCTTCATAATTAGTGCCATGAGACTAAGTGATATCATGAAATAA---AAGTACGCTGAGATCCATATGAATGAGTGTGACTTACAATTGTGTTTTCATGTGTGACAAGAGTTTTTGTTTATTAAAAGAAATATATATGTGTTTTAGAAAGTCAAAAATGTGTTGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGATGAAAATTACGTCCCAATGAATCCCAATTCACCACCACGACAACATTCCAGCAGTTTTACAGAACCAATTCAGGAAGCAAATTATGTGCCAATGACTCCAGGAACATTTGATTTTTCCTCATTTGGAATGCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTCCTGTTGCAGACTGTGAACCACCCCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAGGTAAGGAGAGCAT chr4 + 94230402 31700936 31700935 31701659 31700936 31700935 31701659 724 GTGTGTTTGCATG-GTGTCTTGGAAGCA-GACAGTAAATAA---CAACAAACTCGGGATGACTGGTGCCGAGGGATGGGGAGCAGGAATGATAAATAGCCACTTTCTCTTCTTATTTCTTTAGAAATTAGTTCTCAAGACTGTTATGATATTCCACGAACGTTTCCGAATGACAGATCTAATTCATTGGAGGGCTTCCATAACCACTTTGTAAGTATGATGTGATCTTATGAGAGACAACGGTGACAGCTTGAATGCTTTCTGTTTCTGTGTAGAAAAGCAAGCTGTAAGGTGTTTGTGATTTTCGGTTT---------CGAAATAATGCATTAATCTGAGTA-GCTTAGGTTAAAA--GATTCATATGATTCTCAGCTGATT------GCGTAAC-------TTATTTTGTTAAAGGAAATATATGTTAATTCTAGAAAAACAGAAGCATGTTGACAGTGGGAAGTGTTTCAAGTGAAGAACTAGATGAAAATTATGTCCCAATGAATCCCAACTCTCCTCCACGACAGCATTCCAGCAGCTTCACTGAACCCATCCAGGAAACAAATTATGTTCCAATGACACCAGGCACGTTTGATTTTCCGTTATTTGGAAAGCAAGTCCCTCCTCCCTCTCACATGGGTTTCAGGTCCAGTCCAAAGACCCCTCCCAGACGGTCAATGCCTGCTGAAAAGTGTGAACCACCGCCAGTGGATCGGAACCTCAAGCCAGACAGAAAAGGTGAGGAAAATAT ......x.....:-..:.xx..::..x.-..:.:..::.x.---...::.x.::.:..--:....:----.::......:.xx.:x:x.....:----------.:.x.....--.x:......x::...............:...............:.:.....:.:...:.......:....:.x..:..........................:..-...:...---------------.:..x.x.x..x----.x.:....xx...xx...--------------.x..::.:...xx:.x:x.---------:..x..x...x.x...---:....-...x..:.:x.x.--:..xx:.:...:.:x..::..xx.------.:..:..-------..xx...:.....:.........:.xx:..:......:x..:..:::..................................:...........:.................:..x..x........:...........:..:..x.....x..:......:..........x........x.....x..:.........:.x.:........x......:........:x....:.....:...........:.....:............x..:..:.x....:..x.:.x...........x..x......x..........................:....:.::.. 13M1D14M1D12M3D14M2I6M4I24M10I9M2I105M1I7M15I12M4I18M14I19M9D16M3I5M1D13M2D24M6D7M7D351M 516/669 77.1% 724/94230402 0.0% 85/669 12.7% 111738761 78475794 +15946 chr4 + 190214555 143457435 143457434 143458138 704 TCTTTTATACCTCCTTGCTGCTTAC---------ATTG-TTGCATGTA--AATTCCTCTTTTCCA--TTG--TGCTGA--GCATGAGCATGAATTTTATGTAACAAGACTGAAATATTCTCCA--CAACAAACTTTTGTTCATGCTTTTAGATGTAACATTTTTGCACAGGGCTCTGTTGCTTTTTTTTTTTTTTTTTTTTACAGAAT-CCATTTTCCAATTA-ATAAATAACATTATATTAAGAGAGTCTTCTTTTTACCAATTAGGTCAAAGTCCTAAAATTTTAAGACTCAAACCCCATGGTTTAGAGCGAACTGATTCACAAACCATAGGTGACTTTGCTACAAGAAGAAAGGGTATGTACTTTAGCACCGCATGCTGTATGGGGCATT----------------------GGGAAT--TTATTTTGTAATGTTTTT----TGTTTTTTTTCTAAAAATAAAGAAGAACCTTAAATACTACTGCTGTTGTAAATAAAA-CTTTCCTGCACATTATTTCTAAAGTGAATGCTTCCCATAATACACAATGAGTCTAC---TTACTCTGCCATTAACAACAGCATGTTAAATATTTGATAATATGTGATATTCAGACTTGTCCTTTTGCATTATTCTTTTAACTTTGTAGACAACATTT-----TATCCTTTCAGT------------------TTGTGAACTGTTTGTGA--------TTTTCTGTTGTCTTCTGTCTTT--ATGTATATGTGTTCTGTTCTGAGACAGAATAAAGAATCATTTCCATG chr4 + 94230402 31714007 31714006 31714760 31714007 31714006 31714760 754 TTTTTTATACAGCTTTTATGCTTGCCTCTAGCAAATTACTTGCATGAAGTATTTCATTTGTTTCAAGTTGGGTGCTTAAGGCTTTAGTGTGAAACCTAGCTAT--AGGCTGTAAAACTCTTCCTTCAGCAG---CTTGCTTATGCTTGTGGTGGTAACCTTTCTGCAGGGGATTGTGCTG--------------TTTATTTACAAAATTCCGTTTTCCAATTTTAAAAAGAATACTTTATTAAGAGAGTCTTCTTTTTACCAATTAGGTCAAAGTCCTAAAATTTTAAGACCTAAACCACATGGTTTAGAGCGAACTGATTCACAAACCATAGGTGACTTTACTACAAGAAGAAAGGGTATGTACTTTAGCACTGTATG-TATATGGAGCTTTATAAAAATAAAACAAAAATTAAAGGAACTATTATTTTATAACTCTCCTATAGTCTTTTTACTTCTATTATAATCTAAGATCATGGATGCATATACCTTGCTGAGCAAAAGGCGTCCAGTATAG------GAAAGTAAAAGCTTTCTGTTGTAAAGAGTGCATGAATGCATTATTTTGTCATTAACATAGG--TACTAAATTTCTTA-AATTTCAGTTATTC------GTATTCTGGGTTTACTTTTTTATTTCTTTAGA-AACATGTATTACTCACCTGTAAGTTGCTTGAAATATCGTTCATTAGGAAATGATTGTGAATTCACAGTTTACTTGGGTTTCCTGCTGTTGGATGAGGATAT-TTCAGTCCTCATCCAAGACAAAAAACTGTTCCCATG .:........xx.:..xx.....:.---------...:-.......x.--.x...x.:.x..:..--...--....x.--..x.x..::....x::..xx..x--..:...x..x.:...:.x--..:..:---:...:.:......x.:.xx.....x...:....x:..::.x..:..--------------...x......:...-..:..........x-.x...x..:.:.x......................................................::.....x..........................................:...............................:.:...-.:.....:..x..----------------------:....:--.......:...:x:.::.----.x.....x:.::x.xx....xxx.::.:.x.::..:.xxx.:.:x.xx.:.::....-x:x...x.:.:.x------x.....:..x....:.::.x:..x.x.:..x:.xx.:---...:.:..:........xx:.--.::.....x.:.x.-...x.xx.x.....------..x:.:.x.xx...:.:.....x:.:.x....-.....x.-----.xx...x.x...------------------..:x...x..x......--------...x..xxx..:.:...::x..--...x:x..:.-...x..:..x.xx..::.:...:..:::..:..... 25M9I4M1I9M2I15M2I3M2I6M2I23M2D18M2I6M3D46M14D14M1I14M1I155M1D13M22I6M2I18M4I57M1I13M6D37M3I21M2D14M1D14M6D32M1D7M5I12M18I17M8I22M2I10M1D36M 479/667 71.8% 754/94230402 0.0% 124/667 18.6% 111743428 78471127 +7883 chr4 + 190214555 143459362 143459361 143459493 132 TCTTTTTCTCTTTTTCTTTTCAGTCAAGCCAGCGCCTTTAGAAATAAAACCTTTGCCAGAATGGGAAGAATTACAAGCCCCAGTTAGATCTCCCATCACTAGGAGTTTTGCTCGAGAGTAAGTCCTTTGTCT chr4 + 94230402 31716426 31716425 31716557 31716426 31716425 31716557 132 TCTGTGCTTGTGTTCTTATATAGCAAAACCAGCTCCACTAGAAATAAAACCTCTGCCTGAATGGGAAGAATTACAAGCCCCAGTTAGATCTCCTATCACCAGAAGCTTTGCACGAGAGTAAGTTTCCTATCT ...x.x::.x.x..::.x.x:..:x..:.....x..x:..............:....x...................................:.....:..:..:.....x...........::::.:... 132M 103/132 78.0% 132/94230402 0.0% 0/132 0.0% 111742936 78471619 +13588 chr4 + 190214555 143460311 143460310 143460640 330 TTTTAGATATTTTTGTCAAGGCTTAT-GTTTGTGATGATAATTTCTG-TAATTAGCTCTTCCAGGTTTCCCATGTCCCCCCGACCAGATTCAGTGCATAGCACAACTTCAAGCAGTGACTCACACGACAGTGAAGAGAATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAGACCCAGTATGTAAA------GTTTTAACTTTTCCCTTTCTGAGCAGCC----CTTTTCAGTCATTCAAGCTAGAACTGTTCTGTC---TATAAATTTTATCCTCGTATCTTTATAT---ACTTAAGAAAAAGCAGTAAAAGACAACTTTTAAAAAGCTTATTAAAAATAATGTC chr4 + 94230402 31716828 31716827 31717150 31716828 31716827 31717150 323 TTTAAGATATT-----CAAGATGTATTGTTTGTAA-AATAATTCCTGGTAATTAGCTCCTCCAGGTTCCCCATGTCTCCCAGACCGGATTCAGTTCATAGCACAACTTCCAGCAGTGACTCGCACGACAGTGAAGAGAATTATGTATCCATGAATCCAAATCAGTCCACTGAAGACCCAGTATGTAAAATCTACATCTTAACTACTCTCTTCCTGTGCAGTCCTTACTTTTAAATCATGCAAACACAAATCCTTCCACTCAACATCACCTTCAT--TTGTACTTCTAGATCAAAATTaaaaaaaaaaaaaaaaaaa-----------------attaaaaaaaaTACC ...x.......-----....::x...-......:.-:......:...-..........:........:........:...x....:........x..............x...........:.......................x:.......:.....:.x.....x...................------:.:......x:..:...:...x....:.----.....x.:....x...:.xx:..::x...::::---:..x.x:..:..--.:...::.:..x..---.x....:.....:x.:x....:.-----------------........x...::. 11M5D10M1I8M1D11M1I140M6I28M4I33M3I12M2D14M3I23M17D15M 242/305 79.3% 323/94230402 0.0% 43/305 14.1% 111743483 78471072 +9480 chr4 + 190214555 143466085 143466084 143466233 149 GTTGTCTA----ATACTTTCAGAATCTCTTTGGCAGTAACAGTCTTGATGGAGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGTGGAATACTTAGATCTCGACTTAGATTCTGGGAAATCCACACCACCACGTAAGGTGAGTGA chr4 + 94230402 31719783 31719782 31719935 31719783 31719782 31719935 153 GTTCTCTATGTTACAATTTCAGAATTTGTTCGGCAGCAACAGTCTTGATGGAGGAAGCAGCCCCATGGTAAAACCTAAAGGAGATAAGCAAGTAGAATATTTAGATCTGGACCTAGATTCAGGAAAATCTACCCCACCTCGTAAGGTAAGCAA ...x....----.:.x.........:.x..:.....:..........................:...:.x..:..:........:..:..:..:.....:........x...:.......x..:.....:..x.....x........:..::. 8M4I141M 122/149 81.9% 153/94230402 0.0% 4/149 2.7% 111746302 78468253 +54843 chr4 + 190214555 143468993 143468992 143471013 2021 TTATATGTTGGACTTTTTGTTTT-----TTCTTTGTGTTT---TAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCAGATGAGAGAGTGGATTATGTTGTTGTTGACCAACAGAAGACCTTGGCTCTAAAGAGTACCCGGGAAGCCTGGACAGATGGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAGAGTGTGAAATGAAAATATTGCCTTGCCATTTCTGAACAAAAGAAAACTGAATTGTAAAGATAAATCCCTTTTGAAGAATGAC-TTGACACTTCCACTC------------------------TAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACTT---AAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATGTAAATAATGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACTGTATTTATGCACTTTTTCATCTAAAACATTGTTCTGGGTTTTCCC----AATGTACCTTAC--CATAATTCCTTTGGGAGTTCTTGTTTTTTGTCACACTACTTTATATAACAATACTAAGTCAACTAAGCTACTTTTAGATTTGGAAATTGCTGTTTA-----CAGTCTAACAACATTAAAATG----------AGAGGTAGATTCACAAGTTAGCTTTCTACCTGAAGCTTCAGGTGATAACCATTAGCT-TATACTTG------------------GACTCATCATTT------------GTTGCCTTCC------AAAATGCTG-------AGGATAATGTA-TGTACTGGTGTCAGGACCTAGTTCTCTGGTTAATGTACATTTAGTTTTTAATGGTGGAACTT-TGTTATATTTTGTTAATTACAGTGTTTTTGGTTCATTGAGTGAAGATTCTGCCGGGTGGGATCTTGCACCTTTGAAAGACTGAATAATTACACTACCAAGTAAGCCTGCAAATCATTGATGGCATGCAGTGATGATGTGCTCTTACACTTGTTAACATGTATTAA-----GTGTTATTTGCAAAAGGTAGATTATGTAACCAATCAGGTACGTACCAGGCAGTGATGTGCTAATACACTGATCAGGTTTAGACAATGAGCTTTGGTTGTGTTCTTGTT---AGTCCTAATATTGGTTTTCAGTTTGGAATTAATAAAGCAG-TTGACATTCACTGT---TAGTTACAGCAACATACTGTGATTTTTAATTAGATAGTAATTCAGATTTATTACTCTATGAAATTCTGTCTTTTGACACCATAGTGCCCTTTCTATGATTTT--TTTTAC-TTAATATTCTTCTTGGCCTTATATTTAATTCCCTATGCAATTAATATTTTATATCTGCATTTTTTTAAAAAAAATAGATGTTATA--TAAGTGATTCTCGTATGTAGCACCTGTTGCTTTTCCACTG-AAAGAATTACGGATTTTG--TACTGTGAT---TTATATTCACTGCCCCAATTCAAGAAATATTGGAGCCTTGCTACAATGTGAAATGTTATAGTCATGGACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCTCACCTATAACATGGTCCTGTGACATAGATATTAAGACCACAAGTTGTAGTGAGGCTACAATTATATTCGTCTGTCTTGGCTTTGCAACATAA------TTTAGAAAGCACGTATAGTTGTTTTTTAACCAAGTTACATACAATCTCATGTACTGATTTGAGACTTATAACAATTTTTGGAGGGGGCATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCTAACTGTTGCCTGAGTACACAGATGTGCCCTGATTTCTGGCCCATTGGCCATAGTACTGTGCCTAATCAA---TGTAATAGGTTTATTTTCCCA-ATCCTCAAACTA-------------AAAATGTTCATAAC-AAGATGAATTGTAGACTAGTAACA-TTTGATGCTTTTAAATATTTGCTTCTTTTTAAACAAAAAC----TAAAACCCAGAAGTGAATTTTTAGGTGGATTTTTAAATAAAAAAGATTGATTGAGTTTGGTGTGCAAGCTGTTTTATAATGAAACAACAA chr4 + 94230402 31720132 31720131 31722107 31720132 31720131 31722107 1976 TTATTAGTTTAACTTGTTTTTTTCATTCTTTCTTGCCTTTATCCAGAAAAAGAGCAGCGGTTCAGGCAGCAGTGTGGCAGATGAAAGAGTTGATTATGTTGTAGTTGACCAGCAGAAAACACTTGCACTGAAGAGCACACGAGAGGCATGGACTGATGGGCGACAGTCTACAGAATCAGAAACACCCACAAAAAGTGTGAAGTGAAAACACTGCTTATTCTTCAAAGAACAGAAAAGAA-TGAATTTTGAAGA---------TTTAAAGAACCATAGTGGCACTGTTGCTTGACTGTATGGTATTCACTGGCGTGTGAATAGGTTTTTGACCGAATAGGATGGAAGCCAAAGGACACTTCATAAGCATCAAAGGAGTTTAAGATCATAAATTGGCTATATGTGGTCTCTGGAAAATTTGCAACCTGTAAATAACAT-GTAAAATAGTACCACTTTGCTTTCAGAAAACCTTTCATTCTGTAGTTAACACATTTGTAGTATTACCATGTTTATGCACTTTTTCAGTTAAAATGTTGGTTCAGGTATTCCCAGTTAGTGTACCTTAATGCCTAATTCATTTGGAGAATTT--TTTTTCCTTACACTACTATTCCTTACAAGTCTAGGTTAATTAAGCTACATGTAGATATGGAAATTAATATTTGAACTTCATTTTAACAACTTAAAATTGATTTTTTTGCAGAAATGCTTTCACAATTGAATAATCTACTTGAAATGTCAAGAGGTAACCGTTAGTTACATACTTGTTTATATTTAATACATGCAAAAGATTATTTGGAAGTCTAAAGGTTACCTTCCTAACAAAAATTGCTGTGATTTAATAATAATGAACTATACTGG-GTTTAGACCTACAATACTGGCTTATATG---TTAGCTGTTAGTGGTGGAACTTCTATTATATTTTATTAATGACAGTGTTCTGTGTTTGATAGGTGAAGATTCTGCAGGGTGGGATCTCACACTTTTT-AAGACTGAGTAATTA-AATATCAAGTAAGCCTGCAAACCACTGATGGCATGCAGTAATATTGTGATCTCACACTTATTAACAAGAAATAACCTTTATATTATTTACAGAAGGTAGAGTATATA---AATCAGGTACGTACCAAGCACTACTGTGCTAATACACTGATCAGGTTTAGACAATGAGCTTTAGTTTTGTACTGTTTAGAAGTTCTAATGTCAGTTTTCAGCTCAAGATTAATGGGACAGTTTGACATTCACTGTTTATAGTACTAGCAAAATACTGTGATTTTGAATTAGACATTAATTCAAAT-----------GGAAATACTATGTTTTGACACCGTAGTGCCCTTCTTACGATCTTTATTTTACTTTAATCTCCTGCTTGGCCTTATATTTAAATCCCTATGCAACTGATATTTTGTATCTCTGTTTT-----AAAAATTAGATAATGTACTTAAATGACCCCCTTGTAAGCCACTCGTTCCTCTTTCCTGGTACAGGATTTTAAGCTCTGTATACTGTGATCCCTTAT-TTTACTATGACAGTTCCAAATA---------------ATAATCTGCCTTGATTTAG---------------AAACAATGTTTTTGATATATGGAAGAAA----ATAGAGCTGTTTGAAT----ACATGAACAGG----ATAGATCTAG------------GTAGAAAACTTACTAATG-----------CTTTTTTTTTCTACACAATTGCCCTTGAGTAAGC---TATTGGTTTTATTT------------TCCCACCCCAT----TGTTTTA--------------TTTTG--------------------------------------------------TCCAGGTCACTTAAAATT---TGGGTATACAGCTGT--TTTGTTTTCTGGCATGTTGGCCTTAGTACTGTGCCTAATCTACCGTTTGTTGGTTCTCTCCCCTCACAACCACAATCTACCATATGTAAATTATGTTATTTTTAACGAAGGTTCTTTTAAAATTAGTAATATTTTGATGCTTTGAA-----TG-TTCATTAAAAAAAAAAACACAACAAAACTAAACAATGGATTTTGAGGTGAA-TTTTAAATAAATCAAGTTGTTCAGTTTCGATGTGTAAGTTCTGTCCT-GTTAAACAGCAA ....xx...x:....x..x....-----..::...:x...---:..x..........:..:..............:........:.....x...........x........:.....:..x:.x..x..:.....:..x..:..:..x.....x......x.......:..............:..x:.:..:........:......:.:...:.xx:.x.:xxx.....:..:.:..-......x.:....---------...:.....:x.:-x..:....x:::..:------------------------.:::...:.::.::.x:..:...::.x....:........x:...xx.x::.x:x...x.:....::x.:---..x...:xx.x......x....:.x....:::...x.........::.-.x.........::::..x...::....:..x.x..::...:::..........:.:..........::.:................x:.....::...x.:::...x.....----.:.........x--.x......x.....:::x.:.--.....:x.:........x.x:x.x....xx...:..:..:........x.x.....x........:x.:...:-----..x.:.......x.x...x..----------...::.:xx.......x.x.::xx.....:....::x...:.x.:.....:....:.-:.......------------------:.xxx..:....------------...:......------...x.....-------.x:......x.-.:......-..:x:......xxx:x....:.x..:.:---....:.x...:...........-.:.........:.....x........:.xx...::x.::.............x...........::...:...x-........:......-.x..:................:..:..............:..:x....x...:......:......x.x.x...-----:.:......:..:........x...:..---................:...x.:x......................................:...x...x..xx..---...:.....:.::........:.::::......::::...-..............---....xx:.....x.............x.......:.x.......:..-----------x.....x..:.x..........:..........::..:...:..--......-.....x.:..x.................x...........:.:.......:.....x::....-----.....x.....:x.:..--...:...::.:.x.:.:x:x...::...x..:..:.x:x.-.x..:...x:::::.:..--.........---....-..:...::xx..:...x.:.x.---------------.:...x..xxx..x.x...---------------..x..:xx..:.x:.x.:.:x::..::.----...:xx....:.x.x:----.....:x.xx.----......x.x:------------....x:.:x:...x.x.:-----------...xx:...x.x...:..------..x..x....---...x.x.x..x...------------.x.x.:.:...----..x...:--------------.....--------------------------------------------------.:...::.x..x.xx:..---..:...:....x...--::..x........x::......x.................x.---.x.:x.:.x.:.x.:::.:..-.x..x...x...-------------.x:x.:..:x....-...:.xxx..xx.:.:......:.-...........x..-----..-...x..xx...x......----:.....:x.:x.:..:.....x.....:.-...........xx.::...x.:::x..:.:....:...:.x.x.:x.-:.x.....:... 23M5I12M3I196M1D13M9D13M1I15M24I70M3I48M1D112M4I12M2I21M2D73M5I21M10I57M1I8M18I12M12I10M6I9M7I11M1I8M1D28M3D22M1I74M1D15M1D74M5I28M3D77M3I40M1I14M3I47M11D44M2I6M1I63M5D17M2I40M1I18M2I9M3I4M1D22M15D19M15D28M4D16M4D11M4D10M12D18M11D18M6I10M3D14M12D11M4D7M14D5M50D18M3D15M2D42M3I21M1I12M13I14M1I24M1I14M5D2M1D18M4I29M1D47M1D12M 1330/1821 73.0% 1976/94230402 0.0% 355/1821 19.5% 111748861 78465694 +3602 chr4 + 190214555 143495807 143495806 143495876 70 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--....:.:...........::........x.xx.x...x::.........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 67462610 NA +3270 chr4 + 190214555 143503126 143503125 143503185 60 GATTGTATAGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATTAGCTGAAATTTGTTAAATT chr4 + 94230402 67674855 67674854 67674914 67674855 67674854 67674914 60 GGTTGTGTGGGGGGTTTTTGTGTGTGTGTGTGTGTAAAAATAAATAAAATTTACAAAATT .:....:.:.x.x..x.x.....................x..:x.:......::x..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 75828271 NA +3590 chr4 + 190214555 143511620 143511619 143511692 73 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTGGACCCCAGGAGGCTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::........x:xx.x...x::..x..x.....:..x:.x:.....:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 67478415 NA +6905 chr4 + 190214555 143517294 143517293 143517435 142 CTATAATGGTATGTTTACTATTTTCGAAGACCAATTCTATTTAATTATTTCTTTCTACCAGGAAATATTTGATGATGCGTCACCTGGAAAGCAAAAGGAAATCCAAGAACCAGATCCTACCTATGAAGAAAAAATGGTATGT chr4 + 94230402 31734200 31734199 31734340 31734200 31734199 31734340 141 CTATATAGGTATGCTCTCTTATTCAGAAAATGAGTTATCTTTAATT-TTTTTTCATCTTAGGAATCTTTTAATGATGCATCACCAGGAAAACCGAAAGAAATCCAGGAAGCAGATCCTACATATGAAGAGAAAATGGTATGT .....xx......:.:x..xx..:x...:.:x.:..x.x.......-...:..:x.x::.....x:x...:.......:.....x.....:.x:..:........:...x..........x........:............ 46M1D95M 106/141 75.2% 141/94230402 0.0% 1/141 0.7% 111783094 78431461 +13469 chr4 + 190214555 143521413 143521412 143521604 192 AATTTTTTTTTTT--CAGCAAACTGACCGGGCAAATAGATTCGAGTATTTATTAAAGCAGACAGAACTTTTTGCACATTTCATTCAACCTGCTGCTCAGAAGACTCCAACTTCACCTTTGAAGATGAAACCAGGGCGCCCACGAATAAAAAAAGATGAGAAGCAGAACTTACTATCCGTTGGCGAGTGAGTAAT chr4 + 94230402 31737132 31737131 31737325 31737132 31737131 31737325 194 AATTTCCCTTGTCAACAGCAAACAGACAGAGCAAACAGATTTGAGTATCTGTTGAAGCAGACTGAGCTGTTTGCTCACTTCATTCAGCCTGCTGCTCAGAAAACTCCAACTTCACCTTTGAAAATGAAACCAGGACGTCCACGAATAAAGAAGGATGAGAAGCAGAACTTGCTGTCAGTTGGCGAGTGAGTGAT .....:::..x.:--........x...x.:.....:.....:......:.:..:........x..:..x.....x..:........:..............:....................:...........:..:...........:..:.................:..:..x..............:.. 13M2I179M 163/192 84.9% 194/94230402 0.0% 2/192 1.0% 111784281 78430274 +8530 chr4 + 190214555 143521415 143521414 143521636 222 TTTTTTTTTTTCAGCAAACT--------GACCGGGCAAATAGATTCGAGTATTTATTAAAGCAGACAGAACTTTTTGCACATTTCATTCAACCTGCTGCTCAGAAGACTCCAACTTCACCTTTGAAGATGAAACCAGGGCGCCCACGAATAAAAAAAGATGAGAAGCAGAACTTACTATCCGTTGGCGAG------TGAGTAATAGTTTAAACTTCATAGTTCAACCAAACTTATT chr4 + 94230402 14434805 14434804 14435040 14434805 14434804 14435040 236 TTTGTTTCTCTCTGGAAACTAGAAAGCAGATCGTGCAAAAAGATTTGAATTCCTCCTGAAGCAGACAGAACTCTTCGCTCATTTTATCCAGCCTGCAGCACAAAAATCACCAACATCTCCATTAAAAGTCAAGCTGGGACGTCCACGGATAAAGAAGGATGAAAAGCAGAGTTTGATCTCAGCTGGAGAGTATGTTTAATTGTTATTTCTGACTTAACACTTTCAAGAAAATTATT ...x...:.:..x.x.....--------..:..x.....x.....:..:.x::.x:.:..............:..:..x.....:..:..:.....x..x..:..:x.x.....x..x..x..:..::.x..:.::..:..:.....:.....:..:.....:.......::..:x.x..x.:...x...------.:.x.:x..x..:x:....x.:.x..:x.xx...x..... 20M8I162M6I40M 154/222 69.4% 236/94230402 0.0% 14/222 6.3% 129086610 61127945 +8316 chr4 + 190214555 143524341 143524340 143524493 153 AGGTTATTTTATTTTCATCTTAACAGTTACCGACACCGTAGAACAGAGCAAGAGGAGGATGAAGAGCTATTAACAGAAAGCTCCAAAGCAACCAATGTTTGCACTCGATTTGAAGACTCTCCATCGTGTATGTTAAACACACTTGATTTTTTT chr4 + 94230402 31737986 31737985 31738136 31737986 31737985 31738136 151 AGCTTACTTCTTTCTTGTATTTTCAGCTATCGCCATCGTCGAACAGAACAGGAAGAAGATGAGGAGCTGTTAACAGAAAGCTCCAAGACAACCAACGTCTGCACTCGGTTTGAAGAATCTCCATCATGTGCGTT--TCCTCTTTAATTTTTTT ..x...:..:x..:.::.x..xx...:..:..x..:...x.......:..:..:..:.....:.....:.................::.......:..:........:........x........:...::...--x.x:x:..:........ 134M2D17M 115/151 76.2% 151/94230402 0.0% 2/151 1.3% 111786355 78428200 +5408 chr4 + 190214555 143524365 143524364 143524473 109 AGTTACCGACACCGTAGAACAGAGCAAGAGGAGGATGAAGAGCTATTAACAGAAAGCTCCAAAGCAACCAATGTTTGCACTCGATTTGAAGACTCTCCATCGTGTATGT chr4 + 94230402 14435901 14435900 14436009 14435901 14435900 14436009 109 AGTTACCGTCACAGGCGCACAGAACAAGAAGAAGATGAAGAACTGTTGTCAGAAAGTCGGAAGACATCTAACGTGTGTATTCGATTTGAGGAGTCTCCTTCATGTGAGT ........x...x.xx.x.....:.....:..:........:..:..:x.......::xx..::..x.:..:..x..:.:.........:..x.....x..:...:x.. 109M 79/109 72.5% 109/94230402 0.0% 0/109 0.0% 129088464 61126091 +11322 chr4 + 190214555 143525421 143525420 143526477 1057 ATGCCTATTGTGCTTTTCTTTTG------------TTCTTAGATGTAAAATGGGGTAAACTGAGAGATTATCAGGTCCGAGGATTAAACTGGCTCATTTCTTTGTATGAGAATGGCATCAATGGTATCCTTGCAGATGAAATGGTATGTGTTGGTAGTTTTT-----TTTGAAGGGTATG-------TTTTGTATTG----AAAATATCTTATACGTTGATAAAAGTTTCTTACAGTCTACAACTGTTAGCAAATGGATCCTCTCAGAAACTAGTATAAGCAGCTTGCCTTA---GTTGCATAAGTGTGATCTGTATTT-----TAATTGTGAGAAATT-----------------TCCATCGCTGAAAATA-----TGATA----------AATTTAAAAAGAATACATTTGAGAAACATGTTTTTGGATGACTTTTATAGTACAATGATTTATTTGCTTCCAGTTTTGTAAAACAAAAGTGAGGTCATTAATTGTTTATAATTGATAAATGT--------------TTT---TTCCAGGTGGTAGCTTGTACAATTCTTAGAAAACATTTATCTTTTGTT---------AACTACTAGTTATGTAATGAATGTTTAAAAAAGTTTCCTTATT---GCTATAATGCTAAAACGTTTAATTGGTTGGAGAAAGTATGAAGTCAAAAGAAATGTGTTTCAATGCTAGCTCTGCTAGATGACTTTGGGAATGTCACTTAAACG-----GGGCCTTATGCGGGTGATAATAATACCTCCTTTAGAGACTTGTGAAAATTATATGACA--TAACACTTACAAACTTTGATATATGTTAAGTTTTTGCCATTTATT-AACTGTTATA-----------AATATGTAGCA--TTTCT--TTTGAACATTTCTATA--------TGTTGGGAGGTATAATTGTGAAATAATATTT--------TCATTTTTCA-----CTGCTTCATGGTTATTTTGAAATCTTTCAGGGCCTAGGAAAGACTCTTCAAACAATTTCTCTTCTTGGGTACATGAAACATTATAGAAACATTCCTGGGCCTCATATGGTTTTGGTTCCTAAGTCTACATTACACAACTGGATGAGTGAATTCAAGAGATGGGTACCAACACTTAGATCTGTTTGTTTGATAGGAGATAAAGAACAAAGAGTAAGTTTCTAGTATTT chr4 + 94230402 14436065 14436064 14437173 14436065 14436064 14437173 1109 ATACTTAGTGTTCTTCTACTTAGAGAAATGTTACATTTGCAGATGTGAAAGGAGGAACGCTAAGAGATTACCAAGTCAGAGGTCTGAACTGGATGATCTCCTTGTATGAAAATGGCGTTAATGGCATTCTGGCAGATGAAATGGTAAGCA---GTAATCTTTGGGAATTTGTGGGAATTCACCATCCTTTCCTGTTGCTTCAAATTAATTTGTATATT---------TTCTTATATTTTATATCCTTCAGT---------TTCCCATCAGTGAATGTACATTGTATGCTTTGTGCATTACAT---TCTCATTTGTAGTAAAAAATACATGGAAGAGATTATTCAAGGAGTTACTATTCCAGTTATGCAAATAGTAACTGAGAGTCCGTGTGTACTTCAAATAGATAGAAATGGATTCACATTTATTT-----ACTGTTCT-GTATG-TGACTAATATGTTCATAAGT------AACAACAGTGTGCAGATTCCTTCTGCACTACCCAGAAATATGAATGTGTGCAGCCTCTAGGTCCAAGATTTTAATGCGTTTAATAAAAAAAAAATAGTTTCTTTGTGTCTAGAGTTCAAGTTAATATATCTTCAA--AGTATTTAAAGAA--TTCTTTGGTCGAAATAGAATGAT------TTTGAATGATGAAACAAGGTATGTAT---AAGAACATGGATTTTAATGTTTGTTCAG-TGGATGTTGTTTTGAGCAGAATTCAAACACTGAAGTACCTT-------------TAGTATTTACTGTA---------------TATGCAACAAGTAGTATGTGCCA--TTTTACAGCAGTTAGATTTTTTTCACATCTGGAACTGTAATATAATGAAAGATAATGCGTGGCAAATTTCTGCTGTGTACCTTGCTATAAAGTTCTGTGCTAGGA-----AAGT-TGAAACTATTTCTGTCCAGTGTCTTGTTTCAGTAGGTTTCTTTTTTCCCTCTTTGACAATGT--AGGGTCTTGGTAAGACTCTGCAAACAATAGCACTGTTGGGCTATCTGAAGCATTATCGAAACATCCCTGGGCCACATATGGTCCTGGTTCCAAAGTCAACTCTGCACAATTGGATGAATGAATTTAAACGCTGGGTTCCTTCATTACGTGCTGTTTGCCTTATCGGAGATAAAGATGCCAGAGTAAGTGTTCTGCATTT ..:.:..x...x...:.x:..x.------------..:x:......:...x.:..x.x:..:........:..:...x....x:.:......x.x..:..:........:......:.:.....:..:..x...............x.::---...:.:...-----....x:..:xx.x-------...:x.:...----...x..x:..:..::..---------......:.x.:..:.x.:x.:..:---------:..:..xx.::x.:.:..x::x.:x...:..:---:..:...---.x.x..:....x.x-----..xx..x:...:...-----------------....x:xx..x.....-----...x.----------.x..:...x...xx:x.x.x..xxx....x.x...-----...x..x.-...::-...:.x..x..:.:x:.:x.------.....x....x.xxx...xx..x.x:.:x.::x.x....:.--------------.:.---.:.x..:.xx..::x:..x:...xxxx.:....:.x..x::..x...:---------.::..x..xx.x.x:..--.:.:......:..--...:..:x.---:x..x....x.------...:.x..:.x::.x..:.....x.x---..::.x...x:...:....:.x.:..x.-.:....x:x..xx..:::xx.:.:....:-----.x:....-------------..:..::.x..x..---------------...:::...--..::.:x.:.x.--...x.:.xxx....::.....x:..:x.x.x-......x...-----------...::..:...--.....--.x..x..x..x.....--------..:.:...-----..x.-.....:x..x.:.--------..x.x.....-----:.x...:x.xx::x:.....x.x:x.--....:..x..x........x........xx.x..x:.x..x..:x....:......x.......:........x........::.......x.....x..x:.:.....:.......:......:..:x.x.....x..xx..:.xx.xx.......::.x..x...........xxxx.........x.::x.:.... 23M12I115M3D9M5I13M7I10M4I17M9D24M9D32M3I7M3D14M5I15M17I16M5I5M10I35M5D8M1D5M1D20M6D41M14I3M3I48M9I17M2D13M2D9M3I11M6D26M3D28M1D29M5I7M13D14M15D9M2I12M2D31M1I10M11I11M2I5M2I16M8I8M5D4M1D13M8I10M5I26M2D199M 639/968 66.0% 1109/94230402 0.0% 230/968 23.8% 129089356 61125199 +8828 chr4 + 190214555 143525433 143525432 143525559 127 CTTTTCTTTTGT---TCTTAGATGTAAAATGGGGTAAACTGAGAGATTATCAGGTCCGAGGATTAAACTGGCTCATTTCTTTGTATGAGAATGGCATCAATGGTATCCTTGCAGATGAAATGGTATGTGT chr4 + 94230402 31738896 31738895 31739025 31738896 31738895 31739025 130 CTATTCTTTCACGTCTTTTAGATGTTAAATGGGGAAAGCTGCGTGATTATCAGGTCCGAGGACTGAACTGGCTCATTTCTTTATATGAAAATGGCATCAATGGTATCCTAGCAGATGAAATGGTACGTAT ..x......:::---.:........x........x..:...x.x..................:.:.................:.....:....................x...............:..:. 12M3I115M 110/127 86.6% 130/94230402 0.0% 3/127 2.4% 111786537 78428018 +13086 chr4 + 190214555 143526230 143526229 143526468 239 AAATAATATTTTCATTTTTCACTGCTTCATGGTTATTTTGAAATCTTTCA--GGGCCTAGGAAAGACTCTTCAAACAATTTCTCTTCTTGGGTACATGAAACATTATAGAAACATTCCTGGGCCTCATATGGTTTTGGTTCCTAAGTCTACATTACACAACTGGATGAGTGAATTCAAGAGATGGGTACCAACACTTAGATCTGTTTGTTTGATAGGAGATAAAGAACAAAGAGTAAGTTT chr4 + 94230402 31740772 31740771 31741000 31740772 31740771 31741000 229 AAAGAGTTTTTTTATTCCTGAC------------ATGTTAATATCTTTTAAAGGGTCTTGGGAAGACACTGCAGACAATCTCTCTCCTTGGATATATGAAACACTACAGAAATATTCCTGGTCCTCACATGGTGTTAGTTCCCAAGTCCACCCTACATAACTGGATGAATGAATTCAAGAGATGGGTACCTACGCTTCGAGCAGTGTGTTTGATAGGTGACAAAGACCAGAGAGTAAGTTT ...x.:.x....:...::.x..------------..x..:.x......:.--...:..x..:.....x..x..:.....:.....:.....:..:........:..:.....:........x.....:.....x..:.....:.....:..x:....:..........:.....................x..:...x..x.x..x...........x..:.....x..:........... 22M12D16M2I189M 183/227 80.6% 229/94230402 0.0% 14/227 6.2% 111785458 78429097 +3021 chr4 + 190214555 143526740 143526739 143526806 67 TGTAGTCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATCGCTGGAATCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...........:x........x.xx.x...x.:..x...:.::.:..x.xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 67493529 NA +10179 chr4 + 190214555 143527852 143527851 143528037 186 TTCTCTTGTTACAC---AGGCTGCTTTTGTCAGAGACGTTTTATTACCGGGAGAATGGGATGTATGTGTAACATCTTATGAAATGCTTATTAAAGAGAAGTCTGTGTTCAAAAAATTTAATTGGAGATACTTAGTAATAGATGAAGCTCACAGGATCAAAAATGAAAAATCTAAGGTA---------ATTTGATACTT chr4 + 94230402 14438043 14438042 14438240 14438043 14438042 14438240 198 TTCACTTGCTGTACTGTAGGCTGCTTTTATCCGCGATGTTATGATGCCTGGTGAATGGGATGTTTGTGTTACATCATATGAAATGGTCATTAAAGAGAAATCAGTCTTCAAGAAGTTTAACTGGAGGTACCTGGTAATTGATGAAGCACACAGAATAAAGAATGAGAAGTCTAAAGTAAGCTCAAATATTTGATCCTT ...x....:.::..---...........:..x.x..:...x.:x.:..x..x...........x.....x.....x.........x.:...........:..x..x.....:..:.....:.....:...:.:.....x........x.....:..x..:.....:..:.....:...---------.......x... 14M3I161M9I11M 149/186 80.1% 198/94230402 0.0% 12/186 6.5% 129089809 61124746 +12343 chr4 + 190214555 143527856 143527855 143528052 197 CTTGTTACACAGGCTGCTTTTGTCAGAGACGTTTTATTACCGGGAGAATGGGATGTATGTGTAACATCTTATGAAATGCTTATTAAAGAGAAGTCTGTGTTCAAAAAATTTAATTGGAGATACTTAGTAATAGATGAAGCTCACAGGATCAAAAATGAAAAATCTAAGGTAATTTGATACTTAGATGTGAAAAGCCT chr4 + 94230402 31742074 31742073 31742270 31742074 31742073 31742270 197 CTTGCTGTCTAGGCTGCCTTTGTCAGAGATGTGTTGTTGCCAGGAGAATGGGATGTCTGTGTAACATCGTATGAAATGCTTATCAAAGAAAAATCAGTATTCAAGAAGTTTAACTGGAGATATCTAGTCATAGATGAAGCCCACAGGATTAAAAACGAAAAATCAAAGGTAATTTATCCTTTTACTGAGAGAGACTT ....:.::x:.......:...........:..x..:..:..:..............x...........x..............:.....:..:..x..:.....:..:.....:........::....x...........:........:.....:........x..........:x:x:..x:x..x..:.::.:. 197M 156/197 79.2% 197/94230402 0.0% 0/197 0.0% 111785782 78428773 +8213 chr4 + 190214555 143528528 143528527 143528721 194 TAGATAATGCAATATGCAGAATATTCTAATGGTGTATTTGGTTCTTTTCTTTCAGTTGTCAGAAATAGTGAGGGAATTCAAGACTACAAATAGACTATTATTAACTGGAACACCTCTTCAGAACAACTTGCATGAGCTGTGGTCACTTCTTAACTTTCTGTTGCCAGATGTGTTTAATTCAGCAGATGTAAGTA chr4 + 94230402 14438411 14438410 14438600 14438411 14438410 14438600 190 TAGATTATGTTAAATGTACATTATGAGGATAAC-TATTTGTTTTATTCC---CAGCTGTCAGAGATTGTCCGGGAGTTCAAGACAACAAACAGATTGCTGCTTACAGGGACTCCTTTACAGAATAACCTCCATGAACTGTGGGCATTGCTTAATTTTCTTCTACCTGATGTCTTTAATTCTGCGGATGTAAGTA .....x...:x.x...:.x.x...xxx:..:::-......x..:x..:.---...:.......:..x..xx....:........x.....:...:.::.::.x..x..:..x...:.x.....:...:.x.....:......x..:.x.....:.....x:.:..x.....x........x..:.......... 33M1D15M3D142M 138/190 72.6% 190/94230402 0.0% 4/190 2.1% 129090117 61124438 +9667 chr4 + 190214555 143528573 143528572 143528723 151 TTTCTTTCAGTTGTCAGAAATAGTGAGGGAATTCAAGACTACAAATAGACTATTATTAACTGGAACACCTCTTCAGAACAACTTGCATGAGCTGTGGTCACTTCTTAACTTTCTGTTGCCAGATGTGTTTAATTCAGCAGATGTAAGTATT chr4 + 94230402 31742332 31742331 31742482 31742332 31742331 31742482 151 TCTCCTTCAGTTATCAGAAATTGTGAGAGAATTTAAGACCACGAATCGGCTGCTGCTAACTGGAACTCCACTTCAGAACAACTTACATGAACTCTGGGCACTTCTTAACTTCCTTTTGCCGGATGTCTTTAATTCATCTGAAGTAAGTCTT .:..:.......:........x.....:.....:.....:..:...x.:..::.::..........x..x..............:.....:..x...x.............:..x.....:.....x.........x.x..x......x.. 151M 123/151 81.5% 151/94230402 0.0% 0/151 0.0% 111786241 78428314 +4823 chr4 + 190214555 143530443 143530442 143530533 91 TGTTTGTTTATCTAGGACTTTGATTCCTGGTTTGATACAAACAACTGCCTTGGGGATCAAAAACTAGTTGAGAGGCTTCATATGGTAAGTA chr4 + 94230402 14439432 14439431 14439522 14439432 14439431 14439522 91 TGTTTCTTCCCACAGGATTTTGACTCATGGTTTGATACCAAAAATTGTCTTGGTGATCAGAAACTTGTAGAAAGACTTCACGCTGTAAGTA .....x..:x:x:....:.....:..x...........x..x..:..:.....x.....:.....x..x..:..:.....:::x....... 91M 68/91 74.7% 91/94230402 0.0% 0/91 0.0% 129091011 61123544 +6021 chr4 + 190214555 143530445 143530444 143530535 91 TTTGTTTATCTAGGACTTTGATTCCTGGTTTGATACAAACAACTGCCTTGGGGATCAAAAACTAGTTGAGAGGCTTCATATGGTAAGTATT chr4 + 94230402 31743114 31743113 31743204 31743114 31743113 31743204 91 TTTGTTGATACAGGACTTTGATTCATGGTTTGATACAAACAACTGTCTAGGGGATCAAAAGTTGGTGGAACGTCTCCATATGGTAAGTCTT ......x..x:.............x....................:..x...........::.:..x..:x.x..:............x.. 91M 76/91 83.5% 91/94230402 0.0% 0/91 0.0% 111787331 78427224 +3063 chr4 + 190214555 143533474 143533473 143533526 53 ATCTTAATGAGACCCTTGTCCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 73093383 73093382 73093435 73093383 73093382 73093435 53 ATCCTATTAAAAATTCTGTACATTCTCTTTTTTTTTTTTTTTTTTTGCTTTTG ...:..x.:.:.x:::...x......:...................x:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 70440091 NA +8874 chr4 + 190214555 143534844 143534843 143534997 154 TCCTTTTTAAGGTTTTGCGTCCATTCCTCCTTCGTCGAATTAAGGCTGATGTTGAAAAGAGTTTGCCTCCAAAGAAGGAAGTAAAAATCTATGTGGGCCTCAGCAAAATGCAAAGGGAATGGTATGTATTCTCAGATGTACTTGATAGCACTAT chr4 + 94230402 31743748 31743747 31743894 31743748 31743747 31743894 147 TTCTCTTTCAGGTTTTACGACCATTCCTTTTACGTCGCATTAAGGCTGATGTAGAGAAAAGTTTACCTCCAAAGAAGGAAGTCAAAATTTACGTGGGTCTCAGCAAAATGCAACGAGAATGGTA---ATTCACA----TACTTGAGTGTGCTGT .:..:...x.......:..x........::.x.....x..............x..:..:.....:.................x.....:..:.....:...............x.:........---....x..----.......xx.::..:. 124M3D7M4D16M 122/147 83.0% 147/94230402 0.0% 7/147 4.8% 111791096 78423459 +7978 chr4 + 190214555 143534848 143534847 143534970 123 TTTTAAGGTTTTGCGTCCATTCCTCCTTCGTCGAATTAAGGCTGATGTTGAAAAGAGTTTGCCTCCAAAGAAGGAAGTAAAAATCTATGTGGGCCTCAGCAAAATGCAAAGGGAATGGTATGT chr4 + 94230402 14440259 14440258 14440381 14440259 14440258 14440381 123 TTTGTAGGTTTTGAAACCATTTTTACTGCGTCGCATAAAGGCTGAAGTTGAAAAGAGTTTGCCTCCAAAGAAAGAAGTAAAAATTTATCTTGGACTCAGCAAAATGCAGAGGGAATGGTGAGT ...xx........x:x.....::.x..x.....x..x........x..........................:...........:...x.x..x..............:..........:x.. 123M 103/123 83.7% 123/94230402 0.0% 0/123 0.0% 129094589 61119966 +16192 chr4 + 190214555 143536434 143536433 143536681 248 TTTTTCTTCTTTGAAT--AGGTATACTCGGATATTAATGAAGGATATAGATATACTCAACTCAGCAGGCAAGATGGACAAAATGAGGTTATTGAACATCCTAATGCAGTTGAGAAAATGTTGTAATCATCCATATCTCTTTGATGGAGCAGAACCTGGTCCACCTTATACAACAGATATGCATCTAGTAACCAACAGTGGCAAAATGGTGGTTTTAGACAAGCTGCTCCCTAAGTTAAAAGAACAAGGTA chr4 + 94230402 31744134 31744133 31744383 31744134 31744133 31744383 250 TTTTTCTTCTTTTCATCTAGGTATACAAGAATCTTAATGAAGGATATAGATATTTTGAATTCTGCTGGAAAGCTGGACAAAATGAGACTGCTGAATATCCTAATGCAACTGCGAAAATGTTGCAATCATCCCTATCTCTTTGATGGAGCAGAACCCGGTCCACCTTACACAACAGATATGCATTTGGTCACCAACAGTGGCAAGATGGTAGTACTGGACAAATTACTACCGAAGCTGAAAGAGCAAGGTA ............xx..--........xx.:..x....................x:.x..:..x..x..x...x.............::.::....:...........::..x..........:........x.......................:...........:...............:.:..x..............:.....:..x:.:.....::.:..x..x...:.:.....:....... 16M2I232M 206/248 83.1% 250/94230402 0.0% 2/248 0.8% 111792300 78422255 +12226 chr4 + 190214555 143536450 143536449 143536680 231 AGGTATACTCGGATATTAATGAAGGATATAGATATACTCAACTCAGCAGGCAAGATGGACAAAATGAGGTTATTGAACATCCTAATGCAGTTGAGAAAATGTTGTAATCATCCATATCTCTTTGATGGAGCAGAACCTGGTCCACCTTATACAACAGATATGCATCTAGTAACCAACAGTGGCAAAATGGTGGTTTTAGACAAGCTGCTCCCTAAGTTAAAAGAACAAGGT chr4 + 94230402 14441068 14441067 14441298 14441068 14441067 14441298 231 AGGTATACAAGGATCTTGATGAAAGATATTGATATCCTAAATTCAGCTGGGAAAATGGATAAGATGCGTCTGCTGAACATTCTGATGCAGTTGCGGAAATGCTGTAACCATCCTTACCTGTTTGATGGTGCTGAGCCCGGCCCTCCTTACACCACTGACACACATCTCATCACTAACAGTGGTAAAATGTTAGTTCTGGATAAACTGCTGGCAAAACTCAGAGAGCAAGGT ........xx....x..:.....:.....x.....x..x..:.....x..x..:.....:..:...x.x:.::.......:..:.........x.:.....:.....:.....x..:..x........x..x..:..:..:..x.....:..x..x..:.::.....x:.x..:........:......x.:...:.:..:..:.....xx.x..::.x.:...:...... 231M 172/231 74.5% 231/94230402 0.0% 0/231 0.0% 129095382 61119173 +3586 chr4 + 190214555 143537778 143537777 143537860 83 CATGGTGGCATGCACCTGTAGTCCCAGTTATTTGGAAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:....:..:...:.........x.xx:x...x..........::.:..x:xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 67504581 NA +18632 chr4 + 190214555 143538563 143538562 143538944 382 ATAATAGATTGTTATATTCCCCAACAGGTTCACGAGTACTAATCTTCAGTCAAATGACAAGGGTATTGGACATTTTGGAAGATTATTGCATGTGGAGAAATTATGAGTACTGCAGGTTGGATGGTCAGACACCCCATGATGAGAGACAAGTGAGTAAA-ATTTGGGGAGGGAGATAAAAA-AGAATCAGATAAATTTTT--------TGACAACCATTTTGTTTTATCCATAGGACTCCATCAATGCATACAATGAACCAAACAGCACAAAGTTTGTTTTCATGTTAAGCACGCGTGCTGGTGGTCTTGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATGATTCTGATTGGAATCCCCAAGTAGATCTTCAGGCTATGGTAAGA chr4 + 94230402 31745508 31745507 31745892 31745508 31745507 31745892 385 ATAAAGGCTTTTTAC---CCCAAACAGGTTCACGAGTCTTAATCTTCAGCCAGATGACCAGAGTCCTGGATATCTTGGAAGATTACTGTATGTGGCGAAATTATGAATATTGTAGACTGGACGGCCAAACGCCTCATGACGAAAGACAGGTATATAAGTATTTC---ACTTACATAAAAATAGCATTTGTAAAACATTTAGTTCAACTGATGATAATGTTCTCTT-TATTTAGGCTTCTATTAATGCATATAATGAACCTGGTAGCTCAAAATTTGTCTTCATGTTGAGTACACGGGCAGGAGGTCTTGGAATCAATTTGGCTACTGCTGATGTTGTAATTCTGTATGATTCAGACTGGAATCCACAAGTAGATCTTCAGGCTATGGTAAGA ....x:.x..x...:---...x...............x:..........:..:.....x..:..x:....:..:...........:..:......x..........:..:..:..::....:..:..:..:..:.....:..:.....:..:x:...:-....x---.xxx.x.......-..x..:x.xx...:x...--------...::.:x..x..x.:..-.x:x....x:..:..:........:........x:::...x....:.....:........:..:..:..x..x..x........x......:.x..x...........x......:..........x..:........x........................... 15M3D140M1I5M3D13M1I18M8I18M1D166M 290/375 77.3% 385/94230402 0.0% 17/375 4.5% 111793055 78421500 +7754 chr4 + 190214555 143538587 143538586 143538745 159 CAGGTTCACGAGTACTAATCTTCAGTCAAATGACAAGGGTATTGGACATTTTGGAAGATTATTGCATGTGGAGAAATTATGAGTACTGCAGGTTGGATGGTCAGACACCCCATGATGAGAGACAAGTGAGTAAAATTTGGGGAGGGAGATAAAAAAGAA chr4 + 94230402 14441790 14441789 14441938 14441790 14441789 14441938 149 CAGGTTCCAGAGTGCTACTTTTCAGTCAGATGACCCGTTTATTGGATATTTTGGAAGATTATTGCATGTGGCGTGGGTACGAGTACTGCCGACTTGATGGGCAGACACCACATGAAGAAAGAGAGGTAAGAAAGATGTG----------TAAACAAGAA .......xx....:...x.:........:.....xx.xx.......:........................x.x::x..:.........x.::.x.....x........x.....x..:...x.:..:..x..:..x..----------....x..... 139M10D10M 117/149 78.5% 149/94230402 0.0% 10/149 6.7% 129096797 61117758 +8342 chr4 + 190214555 143538782 143538781 143538943 162 ATAGGACTCCATCAATGCATACAATGAACCAAACAGCACAAAGTTTGTTTTCATGTTAAGCACGCGTGCTGGTGGTCTTGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATGATTCTGATTGGAATCCCCAAGTAGATCTTCAGGCTATGGTAAG chr4 + 94230402 14442306 14442305 14442467 14442306 14442305 14442467 162 ATAGGAAGCAATAGATACATTTAATGCTCCCAACAGCAGTAAATTCATTTTCATGCTGAGTACCAGAGCTGGGGGCCTAGGAATTAATTTGGCAACTGCTGATGTGGTTATTCTCTATGATTCAGATTGGAACCCTCAAGTAGATCTGCAAGCCATGGTGAG ......xx.x..x:..:...x:....xx..x.......xx..:..::........:.:..:..xx.x.....x..:..x..x..:...:.x..:...........:..x...:.x........x........:..:...........x..:..:.....:.. 162M 121/162 74.7% 162/94230402 0.0% 0/162 0.0% 129096476 61118079 +9077 chr4 + 190214555 143540347 143540346 143540500 154 ATGGTAATTTATTTAGGACCGAGCACATAGAATTGGGCAGACTAAGACAGTCAGAGTGTTCCGCTTTATAACTGATAACACTGTAGAAGAAAGAATAGTAGAACGTGCTGAGATGAAACTCAGACTGGATTCAATAGTCATTCAACAAGGTAAG chr4 + 94230402 31747078 31747077 31747231 31747078 31747077 31747231 154 ATGTTATTTTGCCTAGGATCGAGCTCACAGAATTGGTCAAACAAAGACTGTAAGAGTGTTCAGATTTATCACAGACAATACAGTGGAAGAAAGGATAGTGGAGCGTGCAGAAATGAAACTCCGCCTTGATTCCATAGTCATTCAGCAAGGCAAG ...x..x...:::.....:.....x..:........x..:..x.....x..x.........x.x.....x..x..:..:..x..:........:.....:..:.....x..:.........x.x..x.....x...........:.....:... 154M 122/154 79.2% 154/94230402 0.0% 0/154 0.0% 111793269 78421286 +8071 chr4 + 190214555 143543498 143543497 143543663 166 TCTTTTTTCAGGGAGGCTTGTGGATCAGAATCTGAACAAAATTGGGAAAGATGAAATGCTTCAAATGATTAGACATGGAGCAACACATGTGTTTGCTTCAAAGGAAAGTGAGATCACTGATGAAGATATCGATGGTATTTTGGAAAGAGGTGCAAAGAAGGTGAGA chr4 + 94230402 14444645 14444644 14444810 14444645 14444644 14444810 166 TCTAATTCTAGGGAGGCTCATAGACCAGCAGTCTAACAAACTGGCAAAGGATGAAATGCTGCAAATGATCCGGCATGGAGCTACACATGTCTTTGCTTCCAAAGACAGCGAGTTGACGGAAGAAGACATAACCACTATTCTAGAAAGAGGAGAAAAGAAGGTTAGA ...xx..::.........::.:..:...x.x::x......x.x.x:..:...........x........:x.:........x........x........x..:..x..:...x.x..x..x.....:..x:x::x....:.:........x.x.........x... 166M 122/166 73.5% 166/94230402 0.0% 0/166 0.0% 129098853 61115702 +20409 chr4 + 190214555 143543498 143543497 143543994 497 TCTTTTTTCAGGGAGGCTTGTGGATCAGAATCTGAACAAAATTGGGAAAGATGAAATGCTTCAAATGATTAGACATGGAGCAACACATGTGTTTGCTTCAAAGGAAAGTGAGATCACTGATGAAGATATCGATGGTATTTTGGAAAGAGGTGCAAAGAAGGTGAGA------------------------------------TGTAGA-TTAAATAATGCTTTTAATATAGAATGTTTTAGACCAGAAACAGGAAATATTTGTTACATTGATGATAAATAATTTTATTTCCTTAAAGAGAAGCTTTTGTGTACGTGAAGTTAATTTATTTTGACTGC-----AGTTTTCATGCTTTCTTTGCTGTGAATCTAAGAAGC-TGATTGTTTTGTTCTCT-------------AGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTTAGAAATAGGTTTGGG chr4 + 94230402 31747902 31747901 31748440 31747902 31747901 31748440 539 TTTTCTCTTAGGAAGACTGGTGGATCAAAATTTGAATAAACTTGGGAAGGATGAAATGCTGCAAATGATTAGACATGGAGCAACGCATGTGTTTGCCTCCAAGGAGAGTGAGATTACAGATGAAGATATAGATCACATTTTGGAAAGAGGTGCAAAAAAGGTGAGATAAGTGAAGTATTAAAAGGAAAGAAAGACACTTCCCTGTAGACTTAAATGAGGTGTTAGGAGTATACTGCT-----------AAATGACAGCTTTGTTATAAGCTGGGAAAATATGGTTGTT--CTTAGTGAGAAG-TTTTGTATTGGTCATTTTTTTTTCCTACTGTTGCAACTGAGTTTTTGTAACTTTTTGAAAGCACATTTCAAAATTGTTAATGTTCTTTTCTCTCTCCCCCGCCCCCAGACTGCAGAAATGAATGAAAAACTTTCCAAGATGGGTGAAAGCTCACTCAGAAACTTCACAATGGATACAGAATCCAGCGTATATAATTTTGAAGGGGAGGACTACAGAGAAAAACAGAAGGTAACCTTTATGTTTCTTTGGG .:..:.:.:...:..:..x........:...:....:...x.......:...........x.......................:...........:..x.....:........:..x...........x...x::....................:.........------------------------------------......-......:.x.:x..x::x:..x.x..:.-----------.x.x..x.xx.......:.xxxxx.:x.....xxx..:..--....:x......-......:.xx..x.xx..xx...x:.x:x::...-----......::.:x:..:..x:xx.::x..:.x.:..x:-.x.x....:.x......-------------..........:...........:..:...........:.....:.....:........:..............:..x..:..x.....:..:.....:..:.....:...........:.......::.xx.x:.xxx...... 166M36I6M1I28M11D40M2D12M1D34M5I36M1I17M13I144M 365/483 75.6% 539/94230402 0.0% 70/483 14.5% 111795596 78418959 +7733 chr4 + 190214555 143543819 143543818 143543979 161 GTGAATCTAAGAAGCTGATTGTTTTGTTCTCTAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGGTAATTT chr4 + 94230402 14445431 14445430 14445588 14445431 14445430 14445588 158 GTAAGCCTAAAAAT---ATTTTGTGGTATTTTAGACAGCTGAAATGAATGAAAGACTGCAGAAAATGGGGGAGAGCTCTTTAAGAAATTTCACTATGGACACAGAGATGAGCTTATACAACTTCGAAGGTGAAGATTATAGAGAAAAACAAAAGGTAATTT ..:.::....:..x---...x.x.x..x:.:.....x..x..:..........::..x:xx..:.....x..:..:..x:.x.....:..:..x.....:......x::..:x.x..:...........x.....:......................... 14M3D144M 118/158 74.7% 158/94230402 0.0% 3/158 1.9% 129098388 61116167 +16851 chr4 + 190214555 143544734 143544733 143546053 1320 TAGATTGCATTCACAGAGTGGATTGAACCACCTAAACGAGAAAGAAAAGCCAACTATGCCGTTGATGCATATTTCAGGGAAGCTCTTCGTGTTAGTGAACCTAAAGCACCCAAGGTGAGTTGACTGACACAGCATAAAAATATCTAAAAATTTTGAAAATGTAATTTTTTTCATATATTCTTGCAAAAAGAT-----TGATAATTAGATTTTGTGTTTCTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTT-----------ACCAGGAGTTCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCACCCTTCCGAGTAGCTGGGACTACAGGCACCCACCACCACCCCTGGCTAATTTTTGTAAT-------TTTAGTAGTGATGGGGTTTCACCATGTTGGCCAGG--ATGGTCTTGATCTCTTGACCTCATGA---TCCGCCCACCTTGGTCTCCCAAAGTATTGGGATTACAGGCGTGAGCCACTGCCTCTTTCCTACATTTTGCATTTCTTTAGAG--------TGTACTCTCTTCTGTTTTTA---------GTTAACATTTTTCAAAAATTAAT---------TTTGAATCTGTGCAT--TTAAAATTAAGATATAAATTCAGTTTTATTGAAAG--ATGCATTCAGTTGCTTGCAGAATTGGCT---GTTGTGGTTTATGAAGTGAGGACTAAGGATACATTTAAAATGAAATTTCTTTTTTATGGATAACACTTATTTTTGTTTTTCTTTAGGCTCCTCGACCTCCAAAACAACCCAATGTTCAGGATTTCCAGTTCTTTCCTCCACGTTTATTTGAATTACTGGAAAAAGAAATTCTGTTTTACAGAAAAACTATTGGGTACAAGGTAATTGAAATTATCTGCCTTTCTGTTCATTCCTATCCAGAAATTATGGAAGGTATAAACATTAGT-----TATAAATATTTATCTAATTTGGACCTAGTGTGAAACAATACTGCTTTAGCCTAGTCTAGTTGTATGTATGAAATACATAAACTTGGGTCTGTTTTTCTTTAACAAGAAAAAATAAGACTTCATGACCAATCTGGTTTGTTTTTAACATAATACATGCAATGTATCAGTATATTTTCTTTCCTGGTTGAATTGAAACTTGTGAAATGTCAGTTAGTTGGTTCATCACATGCTCTTTAAAATTTACTGATTTGATGGCATAGAAAAATATCTTTTAGGTACCTCGAAATCCTGAGCTGCCTAATGCAGCACAGGCACAAAAAGAAGAACAGCTTAAAATTGATGAAGCTGAATCCCTTAATGATGAAGAGTTAGAGGAAAAAGAGAAGCTTCTAACACAGGTATAG chr4 + 94230402 31748674 31748673 31749728 31748674 31748673 31749728 1055 tAGATGGCATTTACAGAGTGGATTGAACCACCTAAACGAGAAAGAAAAGCCAATTATGCTGTGGATGCTTACTTTAGAGAGGCTCTTCGCGTCAGTGAGCCAAAAGCACCCAAGGTGAGTTGACTAATAT----TAAGAATA--------------------AATTGTTCGGATAGAT----GTGAGAAGTTAAAGCTGAAAGCAAGAAACTGGCCTTAATTTAT------------------AAATATCACTCTATTTACTTTCATAAACTGGGGAGACACTTGAAGGGTTTAATTTTAGAAAAATCTAAA------GGATTTGAG-------------GCAAGCTTATGAGGAAGGAGTAAGAGAGG------------------GATGAAACCTGTAATGTAAGAGTTCAGAAGGATAAAAACTTGACTTTGCTTCTTAAGCAGTGGTCATT-TTTCTTTACCTATGGACTGTATGCTCACTTGG--------------------TGCACATGTGAGTC------TTTTTCCACCAACCT---CTTCCTCAAAGACCCTGTCTGCTCTTGCTCACATTTTTACTTGTAGAAGTCATCATGTTGTAGTAGACATTCGCATGGTGTTTTAATGTGACCTTCCTTTAAGTAAAGACAG----TAAGTTTTGGTAAAAATAAAGGGTTTTTCTGCTCACAAACTAAGCTCAGATTCTGGCT----------GTAAACAGGAGACAAATAGAATCA--------TTTTATGTAT--------------------TTCAGGCGCCACGGCCTCCAAAACAGCCAAACGTTCAGGACTTTCAGTTCTTTCCTCCACGACTCTTTGAACTACTGGAAAAAGAGATTCTCTACTACAGGAAAACCATTGGGTACAAGGTAATAACA----------------TTCACTCCT-TGCATCAAT--------------GCATTAGTAGGAGTATACGTACTTGTC--------------------------CCGCCTTT-------------------------CACATTAACTTA---------------AAGAAAATCACGTTGAGCTGAACAAACGATTAGATT-------------GTACAGAGAACGGA-----------------------------GAAGCTGTGAAA-------------ACTCATCAGACTATCT---AAATGTA---------------------AAACCTTTCAGGTACCTCGTAATCCTGATCTTCCAAATGCAGCCCAAGCGCAAAAGGAAGAGCAGCTTAAGATTGATGAGGCTGAACCTCTCAATGATGAAGAACTAGAAGAAAAAGAGAAGCTTCTAACCCAGGTATGG .....x.....:.........................................:.....:..x.....x..:..:..:..:........:..:.....:..x.......................:.:.:----...:....--------------------....x..:xx...x..----.::.:...x.-----...x.::x...xx:..xx:..xx...x.------------------:.:.x.......:..-----------..::..::xx..x.x.x:x.:.:.x.x:.:.xx:x..:..xx:------..:..::..-------------x..xx...x:...x.:xx:.x.xx.x...------------------.x.:.xx::......-------..:..x..x:xx:::::..x..:x..:.xx::.:.--:.....x.x-.:....x....xxx..---.x:..:...:.x.--------------------.:..x::.....:.------.:.....xx..x::.---:...:.:.:..--------..:x..:x..:x::......---------..:.x...x..x:.:x.:x:.x.---------...x...x..xx.x.--..x..:.x....:.x----.x......:x.:...:--.x.x:..:xx:....::..:.x.x:...---:..x...:.----------.x.xxx....x...xx..:...x.--------.......x..--------------------..:....x..x..:...........:..x..:........:..:.................x:.x......:.............:.....x.x:.....:.....:.................x:x.----------------....:....-.x..xx...--------------:.......-----....x:..:..:..--------------------------.:..:..x-------------------------:....x.....:---------------..x..:.xx.x:.x:::..xx.::.x.:..:x.:..-------------:....x:x..:.x.-----------------------------:..x:.......-------------::......x.:xx...---....x..---------------------.x.:....:..........x........x..x..x........x..:..:.....:.....:........:........:......:.:..:...........::....:....................x.......:. 130M4D8M20D16M4D10M5I28M18D15M11I43M6D9M13D29M18D15M7I35M2I9M1D16M3I13M20D14M6D15M3D11M8I20M9I23M9I15M2I15M4D16M2I28M3I9M10D24M8D10M20D128M16D9M1D9M14D8M5I14M26D8M25D12M15D36M13D14M29D12M13D16M3D7M21D140M 695/989 70.3% 1055/94230402 0.0% 397/989 40.1% 111796060 78418495 +6491 chr4 + 190214555 143544746 143544745 143544851 106 ACAGAGTGGATTGAACCACCTAAACGAGAAAGAAAAGCCAACTATGCCGTTGATGCATATTTCAGGGAAGCTCTTCGTGTTAGTGAACCTAAAGCACCCAAGGTGA chr4 + 94230402 14446121 14446120 14446226 14446121 14446120 14446226 106 ATGGAATGGATAGAGCCTCCCAAACGAGAACGCAAAGCTAATTACGCAGTTGATGCGTATTTCAGAGAAGCCCTACGTGTCAGTGAACCCAAAGTCCCAAAGGTAA .::..:.....x..:..x..:.........x.x.....:..:..:..x........:........:.....:..x.....:........:....:x..x.....:. 106M 83/106 78.3% 106/94230402 0.0% 0/106 0.0% 129098625 61115930 +9066 chr4 + 190214555 143545414 143545413 143545710 297 ACATTTAAAATGAAATTTCTTTTTTATGGATAACACTTATTTTTGTTTTTCTTTAGGCTCCTCGACCTCCAAAACAACCCAATGTTCAGGATTTCCAGTTCTTTCCTCCACGTTTATTTGAATTACTGGAAAAAGAAATTCTGTTTTACAGAAAAACTATTGGGTACAAGGTAATTGAAATTATCTGCCTTTCTGT-------TCATTCCTATCCAGAAATTATGGAAGGTATAAACATTAGT-TATAAATATTTATCTAATTTGGACCTAGTGTG--AAACAATACTGCTTTAGCCTAGTCTAGTT chr4 + 94230402 14446373 14446372 14446672 14446373 14446372 14446672 300 ATACTCAAAATCAAGCTTATGTAATGTTAATA-TACCTATCTGTGTTTAA----AGGCTCCGCGACCTCCAAAACAGCCAAATATTCAGGATTTCCAGTTTTTTCCCCCGCGGTTATTTGAACTTCTGGAAAAAGAAATTCTATATTATCGTAAGACGATAGGGTATAAGGTAAT--GCTTTTTCTTCCCTCCTTTGCCCCCATCCCTCCCACtttaaatttataaatagtatttttattaCTCTTTGCAAATTCTCTTGAAAAGAACTAAATGAAGTAAATAAGACTGTATTAATCTGGTCTTATT .:.:.:.....x..::..x.x.xx.:.x:...-:..:...:.x.....xx----.......x..............:..x...:................:.....:..:..x.........:.x.................:.x...:x.x..:..x..x.....:........--:xx..x...x..:.:..x.-------..x:...:.:::x:..x....::.x:....xxx:....x.-.x.:x.x...:x::.:.xxx.:..:x.:..x:--...:..x....:x...::..:....x:.. 32M1D17M4D121M2D19M7I40M1I32M2I29M 199/290 68.6% 300/94230402 0.0% 17/290 5.9% 129099041 61115514 +6455 chr4 + 190214555 143545919 143545918 143546050 132 TTTTAGGTACCTCGAAATCCTGAGCTGCCTAATGCAGCACAGGCACAAAAAGAAGAACAGCTTAAAATTGATGAAGCTGAATCCCTTAATGATGAAGAGTTAGAGGAAAAAGAGAAGCTTCTAACACAGGTA chr4 + 94230402 14448340 14448339 14448471 14448340 14448339 14448471 132 TCTTAGGTTCCCAGGAATCCTGACCTCCCCAATGCAGCTCAGGTGCAAAAAGAAGAACAAAAGAAGATAGATGAGTCTATGCCTCTGAATCCTGAAGAAACTGAAGAGAAAGAGAAACTACTAACGCAGGTA .:......x..:x.:........x..x..:........x....::..............:xxx..:..x.....:x..:x::.:..x...xx......:x:x..:..:........:..x.....:...... 132M 96/132 72.7% 132/94230402 0.0% 0/132 0.0% 129097579 61116976 +12597 chr4 + 190214555 143546750 143546749 143546919 170 AATATTTTGTTTCTGTTCCTGTGAAGGGATTTACCAATTGGAATAAGAGAGATTTTAACCAGTTTATCAAAGCTAATGAGAAGTGGGGTCGTGATGATATTGAAAATATAGCAAGAGAAGTAGAAGGCAAAACTCCAGAAGAAGTCATTGAATATTCAGGTAATTCTTTT chr4 + 94230402 31750900 31750899 31751069 31750900 31750899 31751069 170 AATGTTTGCTTTTAATTGCTGCAAAGGGATTTACTAACTGGAATAAGAGAGATTTTAACCAGTTCATCAAAGCTAATGAGAAGTGGGGCCGTGACGATATTGAAAATATAGCACGAGAAGTAGAAGGAAAAACCCCAGAGGAAGTCATTGAGTATTCAGGTAACTTATTT ...:...xx...:x:..x...::...........:..:..........................:.......................:.....:..................x.............x.....:.....:...........:...........:.:x... 170M 148/170 87.1% 170/94230402 0.0% 0/170 0.0% 111795850 78418705 +8809 chr4 + 190214555 143546774 143546773 143546911 138 AGGGATTTACCAATTGGAATAAGAGAGATTTTAACCAGTTTATCAAAGCTAATGAGAAGTGGGGTCGTGATGATATTGAAAATATAGCAAGAGAAGTAGAAGGCAAAACTCCAGAAGAAGTCATTGAATATTCAGGTA chr4 + 94230402 14450052 14450051 14450189 14450052 14450051 14450189 138 AGGGCTTTACAAACTGGAATAAGAGAGATTTTAATCAATTTATTAAAGCTAATGAGAAATATGGTCGTGATGATATTGATAATATTGCTCGTGAGGTGGAGGGAAAGTCACCTGAGGAGGTCATTGAGTATTCAGGTA ....x.....x..:....................:..:.....:..............:.:x.................x.....x..xx.x..:..:..:..x..:x.x..x..:..:........:.......... 138M 113/138 81.9% 138/94230402 0.0% 0/138 0.0% 129096722 61117833 +15940 chr4 + 190214555 143547335 143547334 143548146 812 TAAAGAAATAAAAATATAAATGATTTGTTTACTTTGT--------CCAACTTTTACAGCTGTGTTTTGGGAAAGGTGCAACGAGCTCCAGGACATAGAGAAGATTATGGCTCAGATTGAAAGGGGAGAGGCGAGAATTCAAAGAAGAATAAGCATCAAGAAAGCACTTGACACAAAGGTAATT-------TGCTTGTTAATAAGTTAGGTAGTTAATAAAATAACTCCTAGCTGTGAGTATGAGAGAGTGACTTTTTATAAAGGAAAAGAAGTAAGGGTTTACAATTTAAAATTTCTTCAGA---GTAGCATTCAAACATGGTATTGTCAGCAGAATTTACCTATACACTAGACTGATAGATCTGAGTCAAAGACACTAAGATTAGCTTTTTACTAAGTAGAATCAGGAAGTCTTAGTCTGTATTTCTCTTTATAATAATAAAGACTATAAAGGTCTTTCGGGACAAAGATTATATAAAGCAATTGAAGTGCTCTAGATAGAAAATTCTGATTTGAAATGCAACATTTTAGCTAATTATACTAAAGCTGAGTTTGAAATACAGATTATATAGGATTTGTATTTTATATAATATAAAATCTGACTTTCATAGATTGGACGGTACAAAGCACCTTTTCATCAGCTGAGAATATCATATGGTACTAACAAAGGAAAAAACTATACTGAAGAAGAAGATCGTTTTCTGATTTGTATGCTTCACAAACTTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGACTGGTTTCTTAAGTCCAGAACTGCAATGGTGAGT chr4 + 94230402 14451638 14451637 14452252 14451638 14451637 14452252 615 TAAAGGTGTAAGAATAAAGGAAAAGACTTTATTTTATAAACTGTCTTGCTTTTTTTAGCTGTTTTCTGGGAACGTTGCAATGAACTGCAGGACATTGAGAGAATTATGGCTCAGATTGAACGAGGAGAGGCAAGAATTCAACGGAGGATCAGTATCAAGAAAGCCCTTGATGCCAAAGTAATTACTGCAAGGTTTTTTAAT-----------TTAGGGTGATTGCTTCTTACTGTGCCTGTGG------------TTAGAGGTGGTTAGAATC------------TTTTGAATCCTTTCAGAAAGGGAGCAGTTAGGGATGG------------------------------------------GAGTT-------------CTAGCTTTTTACGTAGTA--ACCACGTGTCTGTCATCAGCAGTTCTATGTA-----------------------------------------ATAAATCCATGG---------------------------TGACATGCTGTATGCT------------TAATAGTGGGTTTT-----------------GTTTTGTGTTC--------------------------AGATCGCAAGGTATAAAGCGCCCTTCCATCAGTTGCGTATTCAGTATGGAACAAACAAAGGAAAAAACTACACAGAGGAGGAAGACAGATTTTTGATCTGCATGTTGCACAAGATGGGCTTTGACAAAGAGAATGTGTATGAGGAACTAAGGCAGTGTGTGCGCAACGCTCCTCAGTTCAGATTTGACTGGTTTATCAAATCCAGAACAGCAATGGTAGGT .....:x:...:....x.::x:.xxxx....:...:.--------:::x:....x:......x..:......x.x.....:..:..x........x....::..................x.:........:.........x.:..:..x..:...........x.....::.x..:......-------x.:..x.....-----------...:x:x:..x:..:..x:.....xx.:..:------------...x.::x.:xx....x:------------...x:...:::......---.x....x.:.::x....------------------------------------------....:-------------:...........xx....--.:..x.x:x::x.x:..x.:.x....x.x..-----------------------------------------.....x.x..x.---------------------------...x....x::..x:.------------...x:x..:....x-----------------.x.....:..:--------------------------....:.x.x....:.....:..:..:......:..x.x..x:x:.....x..x.................:..x..:..:.....:x.x...:....:..:...:.x.....:x.x..x...........:.....x.....x...:.:x.:......:.x......x..........................x.:..:........x........::.. 37M8I138M7I11M11D31M12D18M12D17M3I17M42D5M13D18M2D31M41D12M27D16M12D14M17D11M26D221M 431/597 72.2% 615/94230402 0.0% 233/597 39.0% 129095697 61118858 +18888 chr4 + 190214555 143547383 143547382 143548149 767 AGCTGTGTTTTGGGAAAGGTGCAACGAGCTCCAGGACATAGAGAAGATTATGGCTCAGATTGAAAGGGGAGAGGCGAGAATTCAAAGAAGAATAAGCATCAAGAAAGCACTTGACACAAAGGTA-ATTTGCT---------------------------TGTTAATAAGTTAGG------TAGTTAATAAAATAACTCCTA-GCTGTGAGTATGAGAGAGTGACTTTTTATAAAGGAAAAGAAGTAAGGGTTTACAA---------------------TTTAAAATTTCTTCAGA-GTAGCATTCAAACATGGTATTGTCAGCAGAATTTA------------------------CCTATACACTAGACTGATAGATCTGAGTCAAAGACACTAAGATTAGCT----------TTTTACT-----------------------------AAGTAGAATCAG-------------GAAGTC-------------------TTAGTCTGTATTTCTCTTTATAATAATAAAGACTAT--AAAGGTCTTTCGGGACAA--------AGATTATATAAAGCAATTGAAGTGCTCTAGATAG---AAAATTC-----------TGAT--TTGAAATGCAACATTTTAGC-------------------------TAATTATACT----------AAAGCTGAGTTTGAAATACAGATTATATA-GGATTTGTATTTTATATAATATAAAATCTGACTTTCATAGATTGGACGGTACAAAGCACCTTTTCATCAGCTGAGAATATCATATGGTACTAACAAAGGAAAAAACTATACTGAAGAAGAAGATCGTTTTCTGATTTGTATGCTTCACAAACTTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGACTGGTTTCTTAAGTCCAGAACTGCAATGGTGAGTGCT chr4 + 94230402 31752053 31752052 31753015 31752053 31752052 31753015 963 AGCTGTGTTCTGGGAAAGGTGCAACGAACTCCAAGACATAGAGAAGATCATGGCTCAGATAGAAAGAGGAGAAGCCAGAATTCAGAGACGGATCAGCATAAAAAAAGCACTTGACACAAAGGTATCTTTGCTGTGTTTCTTGCTGCCCTTATTTCCCTGCGCCAATGAGGCGAGACGCTGTGGTGTATACTACCCAGCCTATGTTACGAGTGCATTAAGACGACATTGTT---GGGCACAGTATTGCTGTCTTTCACGTATTCCTCAGCAGTTCTACCTTTTCCTTTTCTGTAGAAGTGCTATTCCTTTGCAGTTTCTACTTTTGAATTTAAATGCTTTAGGTAGGTGAAAAATTCCTAT---TTTGGCTGGTAG--CTGTGATGATAACTTTAGGTTTAGCTGAGCCACATACTTTACTTTTCTTGTGATTTTTGACTGTTCCTGATCAAAAAGAATCCGAGCCAAACTGGCAGATGTCAACAATTTTCACGTCATGTCCAGTTTGCAGTGTGCAGT-TAATCA-AAAGATTACTGACAAACTTTTCTAAACCTGCTTGTTTAGATGATATTAATAAATT-CAGTG-TCTAGAAAACCTACAGTTCCTACAGTGTGGTGATGGTCGAAATCTAGTTTTCTAGCCTGGTTTTTGTTCATCTGCCTGTCATGATTATTTTGCTTTTACAGAAAAC--AGTTC--CATGCTAATTGTACACAGTTTCTTAGTTTGTATAATCTTA--TTTGTTTTGTTTAGATTGGCAGATACAAAGCCCCTTTCCACCAGCTAAGAATATCATACGGTACTAACAAAGGAAAGAATTACACTGAAGAGGAGGATCGCTTTTTAATCTGTATGCTTCACAAGCTAGGATTTGATAAAGAAAATGTCTATGATGAATTAAGGCAGTGTATCCGAAACTCCCCCCAGTTCAGATTTGACTGGTTTCTCAAGTCTAGAACTGCAATGGTACGTATT .........:.................:.....:..............:...........x.....:.....:..x........:...x.:..x.....x..:.....................-x......---------------------------:.::...:..x:::.------.:..xx...xx.:xxxx....-.:.::....:::xx.::::...x..x.x---:..x.x..x.x.:xx.x:..x..x---------------------...xxxx.....x:...-..:x:....xxx::::..x.:xx.xx:x.......------------------------.....---:.x.:...:...--...x.x::.x:..x:..:.x......----------:......-----------------------------..:x......x.-------------..x...-------------------::...:..:.x.x:x.xx.-....x.-.....:..:--.x.::::....x::..xx--------....x....x..xx....-x....-......x.:---.x.:...-----------....--.:.....x:.::x..:....-------------------------.:.....x:.----------...:.--....:--x..:.x:...:..:.-:.x..:x..x...:......x.x.--.:..x:..x:x........xx.:........x.....:..:.....:...........:.................:..:..:........:..:.....:...:.:..:..............:..x........:...........:...........:x.:........:..x.....:..:.......................:.....:..............:x..::. 124M1I7M27I15M6I21M1I28M3D24M21I17M1I35M24I5M3D12M2D26M10I7M29I12M13I6M19I19M1D6M1D9M2I18M8I18M1D5M1D9M3I7M11I4M2I20M25I10M10I5M2D5M2D15M1I24M2D236M 548/749 73.2% 963/94230402 0.0% 232/749 31.0% 111795330 78419225 +8832 chr4 + 190214555 143549966 143549965 143550109 144 AGTGCGTGTACCATGTTTGTTTATAATTTAGGAGCTCCAGAGGAGATGTAATACCTTAATTACTTTGATTGAAAGAGAAAACATGGAACTAGAAGAAAAGGAGAAGGCAGAGAAAAAGAAACGAGGACCAAAGC---CTTCAGTAAG chr4 + 94230402 31753443 31753442 31753585 31753443 31753442 31753585 143 AGTGAGTG-ACTGTGTTG---TGTGATTTAGGAGCTACAAAGGAGATGCAATACTTTAATCACCCTGATTGAAAGAGAGAACATGGAACTGGAAGAAAAGGAAAAGGCAGAAAAGAAGAAACGTGGACCAAAACCATCTTCGGTAAG ....x...-..::....x---.:.:...........x..:........:.....:.....:..::.............:...........:...........:........:..:........x........:.---....:..... 8M1D9M3D113M3I10M 119/140 85.0% 143/94230402 0.0% 7/140 5.0% 111796523 78418032 +21847 chr4 + 190214555 143553113 143553112 143553456 344 TTGTAGACACAGAAACGTAAAATGGATGGCGCACCTGATGGTCGAGGAAGAAAAAAGAAGCTGAAACTATGAATATGTTTTTGTTTCATAATCACTAACTTTAAACCAGTAGTTCTTTAATTTACGGGTCTTCATAAGATGTACTGTACAATGCTCAATTGTTATGTCATTTAAAGACATCAGGTTCATCTGTTTACTGAGCTAGAAACATAGT------ATGTAGTTTCACTTTTTTAAATGCAACAGCTGTGCTGAAATTTTTTTATCATTAACACTTGAAGTAATAAAATAGGCTTCATTTATTACTAAGTGTTTCATTTGATTTATTTTTCTATTGTAGTTCCATT chr4 + 94230402 31754536 31754535 31754873 31754536 31754535 31754873 338 TTCCAGGCACAGAAGCGCAAAATGGATGGTACTCCTGATGGTCGTGGAAGAAAAAAGAAGCTAAAGCTGTGAAT--GCAGAAGTTTTATAATCACTAAATTTAAAA-AGTAGTTCTTTAATTTACGGGTCTTCATAAGATGTACTGTATAATGCTCAACTATTATGTCATTAAAGGACATCGGGTTCATCTGTTTACTGAACTAGAAACATAGTACTTAAATGTAGTTTCACTTTTTTAAATGCAACAGCTGTGCTGACTTTTTTTTACCATTAACACTTGAAATAAT-AAATAGGCTTCATTTATTAATAA-TGCTTTACGTGGCTTTTTTTTTT-------TTCCATT ..x:..:.......:..:...........::.x...........x.................:..:..:.....--.:xxxx....:...........x......x-.........................................:.........:.:..........x..:......:..................:.............------......................................xx........:..............:....-...................x...-..:..:.:x..::..x.....:.-------....... 74M2D30M1D107M6I68M1D23M1D23M7D7M 292/332 88.0% 338/94230402 0.0% 18/332 5.4% 111798577 78415978 +3268 chr4 + 190214555 143572667 143572666 143572754 88 GATATCTATAGAGACACACACGTTTGTGTGTGTATATATAAATATATATGTATGTGTATGTGTGTGTGTATATATATATGTATGTGTG chr4 + 94230402 22600185 22600184 22600272 22600185 22600184 22600272 88 GAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ..x..::.x::.........::..::::..::x.:.:..:x...:.x.x:.....:...x.............::..:::::.:x... 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% 120972482 69242073 +3166 chr4 + 190214555 143572691 143572690 143572760 70 TGTGTGTGTATATATAAATATATATGTATGTGTATGTGTGTGTGTATATATATATGTATGTGTGTGTGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATAT--GTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.:...::.:::...:.....--..x...:..::..:...........:..x......::.x...:.. 23M2D45M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 56938767 NA +3255 chr4 + 190214555 143609417 143609416 143609497 81 TGGAAAAGTAAGCATTGATTATAAAAAGAAGGATATACTGTGAAGTGGACTATGTAGAAAATGTAAAAAAAAAGTCTCCAC chr4 + 94230402 35181975 35181974 35182054 35181975 35181974 35182054 80 TGCAAAAACATGCAT-GCTTCTAAAAAGGAGGATCTGCTGTGCGGTGGATAATGTGGCAAATGTAGAGATCAGTTTTTCAC ..x....::.x....-.x..x.......:.....x.:.....x:.....:x....:.x.......:.:.xx.:x.:.:... 15M1D65M 57/80 71.2% 80/94230402 0.0% 1/80 1.2% 108427442 81787113 +3096 chr4 + 190214555 143616653 143616652 143616722 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACACGGGAGGCTGAGGCCGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:........x:.::........x..x.x...xx:.x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 67583456 NA +3106 chr4 + 190214555 143707751 143707750 143707817 67 TGTAATCCCAGCTACTTGGTAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........:x........x.xx.x...x::.....:.....:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 67674540 NA +3352 chr4 + 190214555 143723601 143723600 143723674 74 GTGCTCCTGTAGTCCCAGCTACTCGGTAAGCTGAGGTGGGAAGATTGCTTGAGCCCAGGGGTTCCGGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x......:.........:.:x.:......x:xx.x::.x::.....:.....::.:.::......:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 67690397 NA +3215 chr4 + 190214555 143752954 143752953 143753026 73 CTGACCATTGCAAGAAAAACAAACAGAAAGAAACAGTAGCATCAACAACAACAAAAAAATCCCCACAAAAACC chr4 + 94230402 7076616 7076615 7076688 7076616 7076615 7076688 73 CTGATGTTTCTAGAAAAAGAAAACAAAACAAACCAATGAAACAAACAACAACAAAAAAAGCACCACAGAAACC ....:xx..x:.::....:x.....:..x:..x..:.::x.:x................x.x.....:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 136676338 53538217 +3687 chr4 + 190214555 143766701 143766700 143766754 54 CCTTTTCTTTCCCCTTCCTCTTCCCCTTCCCCTTCCCTTTCCCCTTCCCTTCCC chr4 + 94230402 74430682 74430681 74430735 74430682 74430681 74430735 54 CCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ......:...::....::.........:..........x..:.:..:....:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 69336019 NA +4049 chr4 + 190214555 143827192 143827191 143827553 362 ATACCTGGCTCTTT---TTTCTTCACCTTCTGATTTTCCACCTTTTCTTTTTCCTGCTTTCCCTTTTCTTACTTTACCATTTCCTTTTTTTTA--AATTTCTGAACCAGTTGGGAACAAGATTTT----------------TTTTCTAACTAATTTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTTCTTCTTTCTCTCTCTCTCT---TTTCCTTCTTTTTCTTTCTTTTTTTCTGCTTTTTCTGGGGCTCACTCT---GTTGCCCA-GGTTGGAGAGCATTGGCATGATCATGGCTCGCTGCAGCCTCAACCATCCAGGCTCAAGCAATCCTTCTACGT-CTAGCTCCTGAG chr4 + 94230402 33980677 33980676 33981049 33980677 33980676 33981049 373 ACACCTGACCCTACCCATTTCTTGACTCCAT----TGCCCCTACTTCCAATTCATATTTTCCATTCCCGCTTTCTGCCACTTCTTGCCTTTTGCTGGTCTCTGA------------CAAGTTTCTACTTTCTCACCTCAAATTCTCTGGTCATTTTGTTCCTGCAAGCATCTTTTTATTCTGTCCTTGGTTCTATCCTTCATTCCTTTCTTCTGTGCTTCCCCTCCCTTTCCTATCCCCATTCAGGTTCACTTCACCTCATTTTTTATTATGGAAATTTTGTGCTGCTCACTGTTGGGTTGATCATTGCGGGGAAAAATCTGCATTGCC-TGCTTTGCTGGA-CTGCATGTGTTCAGTATCAAACATATATGCTATGCATTACCTCCTGAG .:.....:.:..x:---......x..:::x.----.x..x.:x:...:xx...x.::.....x..::.x:x:.:.:...:...:.x::....:--::.:.....------------....x..:.----------------..:...::::.x...x.:...x.xxx.x.:::..:x...:x.....xx...:x......x......:.....x.x.....::..:::..:..x..:.:x.::---..:x....x::.:x...:..x..x.xx:xx....x..xx.......x.---....x:..-x.:x..::.:x..:x....x::.-..x:.:....x.-.:x..xx::.:...xx....:..xx:x.x...:.:-:..x........ 14M3I14M4D58M2I9M12D9M16I102M3I48M3I8M1I23M1D12M1D35M1I12M 207/344 60.2% 373/94230402 0.0% 47/344 13.7% 109846515 80368040 +3229 chr4 + 190214555 143827366 143827365 143827437 72 CCTTCCTTCCTTCCTTCTTTCCTTCCTTTCTTCTTTCTCT--------CTCTCTCTTTTCCTTCTTTTTCTTTCTTTTTT chr4 + 94230402 31719018 31719017 31719097 31719018 31719017 31719097 80 CCTTCTGTCTTTCCTTCTGCCTTCCTCTTCATTTTTTGCTGACTGCTGCCCTCTGTCTTCCTTTTTTTTCTTTATCTTTT .....:x..:........x:.:.:.::...x.:...:x..--------.:....x.:......:.........x.:.... 40M8I32M 53/72 73.6% 80/94230402 0.0% 8/72 11.1% 112108348 78106207 +3604 chr4 + 190214555 143829929 143829928 143830011 83 CGTGGTGGTTGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.....--.::.x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 67796732 NA +3156 chr4 + 190214555 143875845 143875844 143875916 72 GCACCTGTAGTCCCAACTACTGTGGAGGCTGAAGCACGAGAATCACTTGAACCAGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...:.....xx::.......:x.x:.x...x..........x:.:..x:xx:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 67842639 NA +3177 chr4 + 190214555 143898246 143898245 143898319 74 GTGCGCCTGTATTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....x.::..........::........x.xx.x...x::........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 67865042 NA +3071 chr4 + 190214555 143903526 143903525 143903589 64 AAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAGACTTCACCATGTTTAGTCTTCAGCTAATCA chr4 + 94230402 27489672 27489671 27489731 27489672 27489671 27489731 60 AAAAAAAAAAAAAAATAGAAACAACAAAAATAAGGCTTCACTATGTGT----TTCATCTACTTA ...............x.....x..x..:..x...:......:....x.----....x...x.:. 48M4D12M 49/60 81.7% 60/94230402 0.0% 4/60 6.7% 116413854 73800701 +3096 chr4 + 190214555 143936175 143936174 143936244 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 67902978 NA +3016 chr4 + 190214555 143944551 143944550 143944614 64 TTTTCTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTGACAGAGTCTCGCTCTGTCAGCCAGTCT chr4 + 94230402 22344085 22344084 22344148 22344085 22344084 22344148 64 TTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCTGACATAGAAACTCCTTGTTAATCACTTT ...:x....x.:........:.............:.....x..xxx.x.::...:.::..x.:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 121600466 68614089 +4671 chr4 + 190214555 143948205 143948204 143948360 156 CAAGATATTTTTTCTAACTAATTTCCCTCTTCCTTCCTTCCTTCCCTTCCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCT-TTCTTTCTTTCTTTCTTTCTTTCTTT--------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176257 50176256 50176414 50176257 50176256 50176414 158 CAAGATGGATTTTCTG-------TCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......:xx......:-------..:.x..x.::.....:.....:..x:..x:..x:::..x.x.:x.....::.x....:.x.-...x..:..x::.............:--------.:.:.::x:......x::.:...::..........:.:.x..... 16M7D62M1I26M8I45M 100/149 67.1% 158/94230402 0.0% 16/149 10.7% 93771948 NA +3142 chr4 + 190214555 143948236 143948235 143948319 84 CCTTCCTTCCTTCCCTTCCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 66394905 66394904 66394988 66394905 66394904 66394988 84 CTTTCATTTAGTCTCTTTCAATTTCTACCTTCCTTCATCCTCCTATCTCAGTTTTTCTCCCTTCCTCATTTTCTCTCAATCTTT .:...x..:xx..:...:.xx..:..x.........x.:..:..x::..xx.:.....::...:..:x:.....:..xx..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 77553331 NA +3011 chr4 + 190214555 143948240 143948239 143948323 84 CCTTCCTTCCCTTCCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 66394905 66394904 66394988 66394905 66394904 66394988 84 CTTTCATTTAGTCTCTTTCAATTTCTACCTTCCTTCATCCTCCTATCTCAGTTTTTCTCCCTTCCTCATTTTCTCTCAATCTTT .:...x..:xx.::.::.:xx..:..x.........x..:..:.x....xx.:.....::...:..:x:.....:..xx..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 77553335 NA +3213 chr4 + 190214555 143948243 143948242 143948325 83 TCCTTCCCTTCCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::...::...::x.:...x:.:......:::...:xx..x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 86576216 NA +3397 chr4 + 190214555 143948253 143948252 143948406 154 CCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTTCTTCTTTTCC chr4 + 94230402 19215406 19215405 19215557 19215406 19215405 19215557 152 CCCCCCCCTCCCCCCC--CCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCC ....::...:..::..--..:.:..:..:..:.:xx..::xx:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.....:x::x.:::.:xxx.::......xx....:..:.:.:..x.x.:..::.x... 16M2D136M 87/152 57.2% 152/94230402 0.0% 2/152 1.3% 124732847 65481708 +3678 chr4 + 190214555 143948259 143948258 143948375 117 CCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x:.:.::.....:::xx.x..:.......:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx.......:..:.:.::.........::..x.:.x.:. 65M6I52M 74/117 63.2% 123/94230402 0.0% 6/117 5.1% 80251142 NA +3629 chr4 + 190214555 143948268 143948267 143948392 125 CTTCCTTCTTCTTCTTCTCTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCC---TCTTTTCTTTCTTCCTTTTTATTT ...:x...:...:...::.xx.-..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x.xx.......:..:.:---...:.::......:.....xx... 22M1I76M3D24M 79/122 64.8% 123/94230402 0.0% 4/122 3.3% 80251151 NA +3965 chr4 + 190214555 143948271 143948270 143948396 126 CCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC---CCCTCTTTTCTTTCTTCCTTTTTATTT .:..x...:...:..:..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:.:.:x.xx..........---.:..............::x:...x... 96M3D27M 79/123 64.2% 123/94230402 0.0% 3/123 2.4% 80251154 NA +3402 chr4 + 190214555 143948285 143948284 143948402 118 TCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTTCTTCTT chr4 + 94230402 63697123 63697122 63697239 63697123 63697122 63697239 117 TCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTT-CTTCCTTTTTATTT ..:::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.::..x....:.:x.xx...x......:::.....::...-...:....:.x:.. 103M1D14M 72/117 61.5% 117/94230402 0.0% 1/117 0.9% 80251162 NA +4058 chr4 + 190214555 143948288 143948287 143948409 122 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTT----TCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTTCTTCTTTTCCAGG chr4 + 94230402 63697117 63697116 63697242 63697117 63697116 63697242 126 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTT-CTTTCTTCCTTTTTATTTAAG ....x..:..:..-....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....----::..x....:..x.x....:...:.:.::......-.......:...:..x.::.:. 13M1I52M4I35M1D21M 83/121 68.6% 126/94230402 0.0% 6/121 5.0% 80251171 NA +3034 chr4 + 190214555 143948349 143948348 143948410 62 TCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTTCTTCTTTTCCAGGG chr4 + 94230402 46862162 46862161 46862223 46862162 46862161 46862223 62 TCTATCATTCCTTCTCTCTTTCTCTTTTTTCTTGCTTCTCCAGTTGTGCGGCTTTTCCAGGG ...x..x...:........x.....:.......x...:.x.xx.:x.x.xx........... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 97086187 93128368 +3225 chr4 + 190214555 144011249 144011248 144011322 74 GTGCGCCTGTATTGTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....x.x:..........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 67978045 NA +3388 chr4 + 190214555 144016398 144016397 144016476 79 TCCTTCCTTCTTTTTTCCTTCTTTTCTTTCTTCCTTCCTCTCCCTCTCTGCTTCTCTCTCCTTCTCCCTCCCTTCACCT chr4 + 94230402 84992643 84992642 84992713 84992643 84992642 84992713 71 TCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCT--------CCCACTGCCTTTCTCTCCCACTATATCCCCTCAGCT ..:::.:..:..........:.....:........--------.:.x....:.:.......:x..x:x....:...x.. 35M8D36M 53/71 74.6% 71/94230402 0.0% 8/71 11.3% 59023755 NA +3055 chr4 + 190214555 144024204 144024203 144024259 56 AAGTGTATAACTCATATGTATATATACACACATACACACACACACACACATACATG chr4 + 94230402 87431508 87431507 87431563 87431508 87431507 87431563 56 AAGTGTCCGCATCAGATGTATTTATACACATGGACACACACGCACTCACATGCATG ......x::xx...x......x........::x........:...x.....:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 56592696 NA +3396 chr4 + 190214555 144058268 144058267 144058459 192 TTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTCTTTTT chr4 + 94230402 71957334 71957333 71957525 71957334 71957333 71957525 192 TTTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTT---TTTTTCTCTCTCCTCTTTCTCTTGTAGGATCAGTACTTTTTCCCACTTCCTTACCTGTTCTT ......xx.x....x:....:xxx.::.x:.x:...x..:..::::......x.x...x:::...:.:.::::..xx...x..x:.:...::xx....xx---..:...xx:..x..:.xxx:.......---.:.....:...:..:.:.....:x:xxxx..xx.x....:.:::x...:...x.:.x..:.. 100M3I27M3D62M 109/189 57.7% 192/94230402 0.0% 6/189 3.2% 72100934 NA +3420 chr4 + 190214555 144058286 144058285 144058447 162 CTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTC chr4 + 94230402 83689759 83689758 83689920 83689759 83689758 83689920 162 CTTTATTGCTTCTGTTCACTTCTTCTCTCTATACTACTTATTTCTTCTCTTTCTACTCTGATTTCTCTGCAGTATCCAGCTCTATCACTTCTGCTTACAATCTCATTCTCCTAAAGTTTTTCTTCTCGCTGTCACTCTCTTTCACAACTTCCTTTTCCCTTC ....x..x...:::..:x:.:....::...x.x:.x...x::.::::..:...:x:...xx:..:::.x.xx.x.::xx:...x..x:.::.x...x.xx...:x:.:....xxxx.:........:x..x..x......:..x:xx...:.....:.:... 162M 91/162 56.2% 162/94230402 0.0% 0/162 0.0% 60368527 NA +3035 chr4 + 190214555 144058308 144058307 144058388 81 TTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:.:.:x.:.:.x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 86686279 NA +3614 chr4 + 190214555 144058314 144058313 144058450 137 CTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC----------------CCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.....:.:xx:x.::.:.....:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......:..----------------.:..............::.:...x... 60M2I34M16D27M 81/121 66.9% 123/94230402 0.0% 18/121 14.9% 80361197 NA +3098 chr4 + 190214555 144058318 144058317 144058453 136 CTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTC-------------ACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:.::.....:.:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.::...-------------x.xx...:......:.:.:.:..::..:...:..:..x:.. 82M13D41M 74/123 60.2% 123/94230402 0.0% 13/123 10.6% 80361201 NA +3300 chr4 + 190214555 144058318 144058317 144058458 141 CTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTC--------TTCTTTT chr4 + 94230402 48010635 48010634 48010783 48010635 48010634 48010783 149 CCTTCTTTTCTGCTGTACCTCCATTTTTTTTGTCTTTCTCCTTCACGTGGATTTTTTTTTTTACTAAATTCATATTTTCCCTTCCCAACTTTCCTAGTGCCTTTCCCTCTGTTTTCATTCTCTGTCTCCTTCTCATAGCTGTTTCTTTT .:......:..x.:x.x.:...x..:...:.x.......:::.:x.x.xxx..:...:...:x:.xxx.::x.x...:.:::.::.xx::...:.xx.x:..:..:....x.....x....:.x...:::.:..--------....... 134M8I7M 84/141 59.6% 149/94230402 0.0% 8/141 5.7% 96047683 94166872 +4177 chr4 + 190214555 144058319 144058318 144058454 136 TTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTT---CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCCTTCTTTCTTTCTT----------CTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTC ...::.x:..:x..x.::.........:....---.x::.x:.:..x.x..x..::..::x......x.-...x..:..x:..............----------..::.:x.:.:::.x....:..::.......:..:.:.x...... 32M3I34M1I25M10I45M 91/136 66.9% 150/94230402 0.0% 14/136 10.3% 93882053 NA +3778 chr4 + 190214555 144058326 144058325 144058463 138 CCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTCTTTTTCAGG chr4 + 94230402 63697117 63697116 63697242 63697117 63697116 63697242 126 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGT-------CTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTC-----TTTTCTTTCTTCCTTTTTATTTAAG .:..x:.:.::.......:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.-------...xxx:....x:.:....x.xx...:......:::..-----...........:...:..x..:.:. 63M7D38M5D25M 83/126 65.9% 126/94230402 0.0% 12/126 9.5% 80361209 NA +3195 chr4 + 190214555 144058365 144058364 144058487 123 TTCTTTCTTTCTT-----TCTTTCTTT------CTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTCTTTTTCAGGGGCTTCA-CTCTGTTGCCCAGGTTG chr4 + 94230402 40565585 40565584 40565719 40565585 40565584 40565719 135 TTCTGTGCTTCTTCAAGGTCTCTCTGTAACACACTGTTTTTTCCTCTGTCTTTGGTCTTTCTCCTTCGGCCTTTCTTTTGTTTTACTCTCTTGCTTTCTCTTACAACAAACACTCCCTCTCTCTTGCTCCAGCTG ....x.x:.....-----...:...x.------..x.:...:.:...x.....xx........::..xx:..:......x...:x:.:....x......::.x:xx..::x:..:.x-....x....:.x:.:.. 13M5I9M6I84M1I17M 82/123 66.7% 135/94230402 0.0% 12/123 9.8% 103492780 86721775 +3104 chr4 + 190214555 144058365 144058364 144058459 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTCTTTTT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx..::..........::..:x.::xx....x.:::.x:x:...::.x.::.........:....:. 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 60731431 NA +3295 chr4 + 190214555 144058375 144058374 144058453 79 CTTTCTTTCTTTCT---TTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTT chr4 + 94230402 69568192 69568191 69568273 69568192 69568191 69568273 82 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT .....:..x:.x..---..x......:....x.:...:..:.x.....:.::...x...:xx.:.:.....:...:...:.. 14M3I65M 56/79 70.9% 82/94230402 0.0% 3/79 3.8% 74490183 NA +3013 chr4 + 190214555 144058382 144058381 144058471 90 TCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTTCTTTTTCAGGGGCTTCAC chr4 + 94230402 23976501 23976500 23976590 23976501 23976500 23976590 90 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCTGAGCCTTAC .::..:...x...x..:x....x.::x.x...:::.:.x:::x..:x..................:....:.xx.:..:xx.:..:.:.. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% 120081881 70132674 +3014 chr4 + 190214555 144115942 144115941 144116013 72 GCACCTGTAGTCCCAACTACTGCGGAGGCTGAAGCACGAGAATCACTTAAACCAGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...:.....xx::.......:x.x:.x...x.....:....x:.:..x:xx:.....:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 68082736 NA +3308 chr4 + 190214555 144133437 144133436 144133510 74 GTGCGCCTGTATTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....x.::..........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 68100233 NA +3471 chr4 + 190214555 144137767 144137766 144137835 69 TCCCTTTTTCCTTTTCTTTCTTCCTTCCTCTCCCTCTCTGCTTCTCTCTCCTTCTCCCTCCCTTCACCT chr4 + 94230402 84992645 84992644 84992713 84992645 84992644 84992713 69 TCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCCCTCAGCT .........::...:....:..:.:.:..::.:.:.x....:.:.......:x..x:x....:...x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 59145122 NA +27076 chr4 + 190214555 144174525 144174524 144175900 1376 AGAAACTTGGTAGATTTGTTCTAAGATTTGATCGCTAGAGGTCACCAAAGTCACAGAAATTAT---CAGTATTTTTTTCTTTCCGTTTTTGAGT--CACAGGCGGATGTCTCTGGCCTCTCCCATTATGCAGT-----GCATTTACTGGAAGACCTTTTGCTGCTTAGTCTTAAGGAGAGTAAACTGTTTGGACTAGTTTTTTCTAATATTAAATATTCCAGGAAACAGACAGCCATCTATCTATGGGACTATTCAAAACAGATGGGTGTTTCTAGAGAATGTGATTTATTTCCTTCTCTGATACCAAAGGGCCTATTGGTTGATACCTGCTGAATGTGAGTTCTGAGTAATGTTGTTGAGACAGAACCACAGAACACCCAGCAGCAGCACACACCGTTTCAAGTGAAACAGCATGGACCATTTCAAGGAAAAAACATTGTGCCTTTACTGGTAACATGTCTGGTGTAGGAGGGCTCCAATGAAGCAGAACATTCAAGAACACCCATTGCATCTTTTAAATAACAGACCACACTACCTTTTGCATGTTAATAATTCTCCATTTTTTTTTATTGAACTCAACATTAGCCTAAATCCCCAGACCCTAA---ATTTGTGGAGATTCAAAAACAAACAAGATTGGAATCCTGAAAAGACTCAATGAAACTGTCTCAATTTAAGAGATGCTTCTAGCAGAGATAGA-------------------AAGATATAATAGCTAATTTCA------GTTTTTTTAGCATGCTCACATTTTAGGGAGGCATAATTCATATTAAAACTTT---CTAATTCTGTAATTAGACAAGATGTAGCCTGTAGAAGATGAATATTTGTCAGGAGTTAAATGCAGCTAACAAAGATGCA------ACAGGCAAGAAGCCTTTCACATTTTCAAGGTTTCATTTACCAATAGCTACATTATTTCCCTGGTTATGTAGATAAGTTTGTGTTTAA----------------ATGGTCTCCTGCAGAAACTAAGTAAACCAT--------------------------TTTTTTTCCCATAAGACCTCACAGTGC-TTAGATACCTGACAAATCCAAAGTTAAGGCTTTGGTACAAG--CCAT---AACCTAAAAGACTCAAGCC-------AATATCAACGTGACACA---TTTTGCATTTAGGCTTGTTCTTTATTCA-GTGGACTTCATTTGACTTTGATCTTGGTTAACTTTGAAGTATGCAAGGTTCCCACTTTCCATAAGGGTTTTTTTTTTTTTTC-CAGTTAAATCAGACAGGCAGGCAAAGGAAATCTAAACCTTGAAAGAAGTGAAAACAACTAGACACAGTCAGTGATATATTTTCACTACTTTGTTTAAAACAGCACATTGCCATACTTAAAACACTTCACATCAATGAGTTATTTATTAAGTTTTAAATAT----------AAGTCACATTTTCCACTGTATCTTAGGAGACACATTTGAAA chr4 + 94230402 31814566 31814565 31815959 31814566 31814565 31815959 1394 AGAAACTTTGAGTATCTTTTCTCTTCGTTGGGCACTAGAGGTCACCAGTGGCACAGACACGAGGAACGGGATTGGTTTCAT---GATCCTCAGCAGTACAGACAGAGGCCTTACCCCTCCCCTGTGACTTTGATTTAAGTTGTTACTGGAAGTCCTGTGGCATCTCAGTTTTTGTAAGAGTGA---GATTAAACTATTTATTTCAAGCCCCACATGCCTCAGA-----------TGTATAACTATGCATCTATCTGAAAGGGATGT-TGCCTCTCGAAAATATGATTTATTCGTGCCTCTGATACTTGAGAGTTCCTTGGCTGATACCTGCTGTATTTGAGCTCTGAGTAATGTTGTTGAGACAGAACCACAGAACACCCAGCAGAAACACATGTTGTTTCAAATGAAACAGCATGGCCCATTTCAAGGAAGAAACAGTACTTCTTTACTGGTTCCATGTGTGGTGTGTGAAGGGTTCACTGAAGCAGAACGTTCAGGAACACCAATTGCATTTTTTGAGAAAGAGACCACACCATCTT-------TTAATACATTCCGACTTTCAGTTTCTGAGTGATGCTATGACAAAAGCCCCCAAGTCCTCATGCATGCACAGAGGCTCAGAAATGCTAA-----GCAATCCTTAGAGAAT---ATATGTCTATCT---TTTAA------CCTCTAGAAGATGCAAATTTACCTAAAAACTTTTATGAGAT-CAATAGCTAAATTTAACAACTGTCAAACTAACATACTC---TATCAG-------TTATTTATA-TAGTGCTTGATACTAATAATGT-CCTAAATATGAAGCAGAgttttttgtttgtttgtttgtttg--attgtttgtttTTAGCAATGATTCATTTTATAAAAACATTGAGCTACTAAAATGT-----------------AATAAACATACTACTGC---AATTATAGAGATGGACTATAATCCAACAGCACCACCTAACAGAAAGTCTTCTTGGAACATTGA--AAGCCCTACCCGCTTTAAATATCAACTCAAAGATTGCTCTGTCAAAAGATTTCATAAAATGTTGGATATTAAACTTGTCACAGACTGAAACTTTGGTAAAAAGTCTATTGAAACTCTAAGCCCTGAAACCTGCATTAAGTAGCAATACCACAGAGAGTTTTGCAT----GCTTG--CTTTCTTCACCTAGGTTTCATCTAACTTTGAAGTGCTTTTACTTTGAGGTACAGAA------------CCTGAAGAATTTCTAAAGCTGAGCAAAGCTAAA--AATTAGGCAGGCAGAAGAAATCTTGCCCTTGAAAGAAGTAAAAACAACCGGACACTGTATGCTACGTATTTTCACTACTTTGTTTAAAACAGCATATTAGTGTACTTAAAACGCTTCAGATCTGTGTGTTATTTACGAAGCTGTAAACATACAAGCATGAAAGTCACATTTTTCACTGCACCCAAGGAGATAAATGTAAAA ........x.x:x..:.x....xxxxx...:x.:.............:x.x......x.:x.x---.:.x...xx....x.---.x.::.x..:--:....:.:..x.:..:xxx....:..::.x.:x:x.x-----.:xx..........x...x.x..xx..:...:..x:x:.....:.---.x..::....x..x....x.::x::.x..::::...:-----------::.x..x.....x:x....:::...x:....x-..::...x..:...:.........:x:x:.........:x:..:.:::x....:............x..x....:...........................................x.:....::::.......:.............x.............:.....x.::x:..........xx.....x......:x..:..x.:..x...........:....:.......x.......:....:.:x..x.........:.:...-------......xx.::.x.:...:xx..x:...::xxx:.xx.::.xx..::.....:::...x.---..x::::...::...:...::xxx.-----.x......x.:.::.:---..:x:x..:...---.....------.:.....x...x::.:.-------------------:....-:.........x..:.------..:xxx:..:...:...---.x.:..-------.x...:...-..:x:...x---.....xx...-x:..:.:.x..x.:..xx.x.xxx:xx..xx.:.....:x.--:..:xx..:xx:..:...x...x..------.x.::..xx:...:x:.x.x..x.-----------------....:x:.:.:..:.x.---::....:x....::::.xxx:.::..----------------.x:....:..xx::.x.:.:.--..:..x.--------------------------..x:.:.x:..x....::...:.:x::-..:....::x:..xx:..xx.:::.:.::........x..:--.:..---...::x..:xx..x..:..-------.:..x...:::x...x.---........----.....--....x....-x.:.::.....:.:.......xx.xxx..x.......:...::x..------------..xx...::...:.xxxx:.xxx.-x..:....--.:x:.........:.:.......x:x.............:........::.....x..xx.:x.::............................:...:x::..........:.....x...x:..x........:x...:.x....:..----------............:.....:.:.:x......:.x..x.:... 63M3I15M3D10M2I37M5I45M3D37M11D32M1D272M7D60M3I25M5D16M3D12M3D5M6D17M19I5M1D15M6I17M3D6M7D9M1D9M3I10M1D41M2D25M6I24M17D17M3D26M16I21M2D7M26I27M1I41M2I4M3I19M7I17M3I8M4D5M2D9M1I46M12D24M1I8M2D150M10I41M 850/1277 66.6% 1394/94230402 0.0% 216/1277 16.9% 112359959 77854596 +3486 chr4 + 190214555 144177144 144177143 144177217 74 AAGCTGTGTGATACTAGACAAGATATTTAACTTATTTGAGCCTCAATTTCATCATTTATGAAATGGAGATAATA chr4 + 94230402 79037109 79037108 79037182 79037109 79037108 79037182 74 AAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATA .......:...:x:...:x...x.....x.:....:....::......:.x:..xx...:.....x:..x.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 65140035 NA +26791 chr4 + 190214555 144188911 144188910 144189494 584 ACTAATTCTGTTTACTTATACTTAACATACAATAGAATTACAACTATAGAGGAAAATCTCTTTTTCTTATTAGGCTGCTGAAGAAAAGTCTCATATTCTG--TGATATCTGTTTCTAATTTGTCTTTGGGGAAAGGAATGCCAAATAATTGCCTTGTTTCCCCCTTCAGACATTCAGAACCTCACCAAACTGCAGTCAAACCAGGATGCACACCCCAGCA-----CGTGATTTTTTTTTT---CAGGATCATAGTCAATAAATTTGATTAGTTTGTAAAGCATTCCAAGCCACTAGTCCACAAAGCAGGTTGAGCCAAT-CCTTCACTT-ACTCCCTGTTCCTTCTAGACCACCAGGGCTCTAGTTTGTATTTT-TAAACCTGGGTTAAATTGTGGCATAACCACAAACCATTGTATGCTATTAACAGTGGGGTTCCAATGAATGACTGACAAACAAAATCTTAGCACAGGAAGCCTACTTCTCTCAGTGGTAAACACATGTTATTAATGAAACGTTTCTAACGGGCTGAAGCAGTTTGAAG--TCTGTCTTGACTGACAAGACTGT-ATTTTGCTATATGGGCTAAACAAACAAAACAT chr4 + 94230402 31824447 31824446 31825026 31824447 31824446 31825026 580 ATCAATTCTCTACATCAATAAATAAAAGCCACAACAACAACAAC-----AGAAAAAACCCTTTTTCTTATTAGACTGCCAGAGA----TCCCAAAATCTAGTTGATATCTGTTTCCAATTTGTCTTTATGGAAAGGAG-GCCAAAGAGTTGCTTTTCTTCCTTTTT-------GCAGAATGCAGCCAAAATGTAGTCTAACCTGGGTGCACCCACCCACATTCACCAGAATATGCATTCTAGCCATGACTCAAGTTAATAAATTTGATTAGCTCGCACAGCACTTCAAGCCAGCAGCCCACAAAGCAGGTTCAACCAATACCTTTGCTTCACCCGCTGCTCTCAGCAGACCACCAAGGCTCTAGTTTGTATTTTCTAAACCTGGGTTAAATTGTGGCATAACCACAAACCATTGTATGCGATTAACAGTGGGGTTCCAATGACTGACTGACAAACAAAATCTTAGCACACTGAGTCTGCTTCTCCCAGTAGTAAACACATGTTATTAATGAAATGATTCTAACAGGCT-ACACAATTGGAAGCTTTTTTCTTGATTGAC-AGACTATGATTTTTCTA-ACAGGCCAAACAAAGAAGGCAT .::......x.x:.::x...xx...x.xx..xx.x..:x.....-----..:....x.:..............:....:::...----..:..x.x...:--.............:...........:x........:-......x.:....:..x:....:::..-------x.....:x:x:.....x..:....x....x..:.....x.x..x:..-----.:x:..x.x:x..:.---..x..::xx...:...............:.:.:.x....:.:.......x:..:..............x.:.....-....::...-..:.x...:..::xx:.........:..................-............................................x......................x..........................xx:..:..:......:....:.......................:.x.......:....-.x:..:..x....--.:.x......:....-.....:.-.....x...-.::...:.......x..::... 44M5D35M4D12M2I36M1D27M7D47M5I15M3I76M1I9M1I44M1I153M1D13M2I15M1D7M1I9M1D22M 445/564 78.9% 580/94230402 0.0% 36/564 6.4% 112364464 77850091 +19848 chr4 + 190214555 144223611 144223610 144224088 478 AGAAAGTATGTTCTAAAGAGGCCATATCCTAAAAACACTGTCA--GTGTAAAACACAGTTGAGAGACCTGGTAACCTATCCAGTATCTACAGGAGAGATGAAAAAAATTGAGCAAAATGA-TATCATATTTCTCCTAGGGTTTTCCTCTCTCCTGGTATGAATGGGAGCTTGAGGTTTTATCATAAAGGGATAAAATAGCAAGAAATT--ATTTACTGGCTTGCAGTCACGGAGAAAAGGCATTCACATCTGTTTCTGGTATTCTGCTGAAGAATCTCTCCAGTTGATAATTTGGATGGGAAGCAAATTGGTTTGTTTTCATAGGTCCTTTTCTTCCAAGCTCAGATAAAACAAACTTATCCTGTGGGTCCAATGGTTTGCATTCTGAATTCTTGGTTTACGTGGCACAAAATCCTTCTATTATATTGCTAACACATTATCCATCTTAAAGAGAACAAAACTGGCTAAGTTTTAGAAGGACTT chr4 + 94230402 31833000 31832999 31833465 31833000 31832999 31833465 466 AGAAAATATATCCTGATGAGATTATTTATTGGAAATACTGTAAAAGTGTGTCATATAATAAAGATGACCGATAACTCATTCATTATCTTCAGGAAGGAC--AAGAAATAAAGCAAAATGGGTGTCAAATTACTTCAAG--CCTTTCTTTTGCCTGATCTGGATGAGAACACAAGGATTTGGCATAAAAGGAGAAAACTG---GGAACTGAACTGGCTGGTTTGCAATTGTTGAGAAAAGGCATCAACATCTGTTTCTGGTCTTTAGCTAAAGAATCCTTCCAGCTGATCATTTGGATTGAAAGTACATTGGTTTGTTTTCGTAGGTCCATTTCTTCCAAGTTCAGATAAAACAAATCTCTCCTGCAGGCCTGATGGTTTGTGTTCTGAATTCCTGGTTC-TGTA---------CTCTGTACTATAATGCTAACGTATTATCCATCTCAAAGAATACAAAACTGTTTATGCCATGGCACAATTT .....:...:.:..:.x...:::..x.x:.::...:.....x.--....:xx.:.:.:.x:...x:x.:.:....::..:..x.....x.....::..:--..:....x:.........:-.:...x...x..:.x..--::..:..:.:x....:.x..:...:..:.x::...x...:x......:...x....:x.---.:..:.--.:.x:....:.....:.:::x............:x...............x..:x...:.......::.....:....x........x.:...:.x..............:.......x...........:..............::.x.....::..:.::........::..........:.....:-:..:---------.::.x..:....x.......::...........:.....:x.........x:..x.::x.:.x.x:.:.. 43M2I54M2D19M1I17M2D59M3D6M2I189M1D4M9D70M 332/461 72.0% 466/94230402 0.0% 22/461 4.8% 112390611 77823944 +3373 chr4 + 190214555 144235735 144235734 144235810 76 TTTCTTTCCTTTTCTTCTCTTTTCTTTTCTTTCGCTTTCCTTTCTTTTCTCTCTCTCTCTCTCTCTTTCTTTCTTT chr4 + 94230402 70705536 70705535 70705611 70705536 70705535 70705611 76 TTTATCCCCTTTTCTTCTCATGTGACCTCTCTCGCTTTCCTTGCTTTTCTCCTTCTCTGCTTGTTTATTCTGCTCT ...x.::............x.x.xx::...:...........x........::.....x::.x.:.x.::.x..:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 73530199 NA +3180 chr4 + 190214555 144259534 144259533 144259644 111 AAGAGAGACTACTTGAAAATACACAGAGAAGAGAAAAGAAAAAAAAAACAAAAAGAAATGAACAAAGCTTACAGAATCTGTGGGACAACATAAAACAAATATTCAGATTAT chr4 + 94230402 70869822 70869821 70869931 70869822 70869821 70869931 110 AACAGAAAC-ACTTGAGAACGCACAGAGATCCAAAGAAAAGGTTAAAAAGAAAATAAGTGTTAAAAGCAAACATAATCGTTTTTAAAATAAAAAATAGATATTCATTTTAT ..x...:..-......:..::........xxx:..:.:..::xx....x:....x..:..xxx.....xx...x....xx.xxx.x..:.x....:.:.......xx.... 9M1D101M 73/110 66.4% 110/94230402 0.0% 1/110 0.9% 73389712 NA +13644 chr4 + 190214555 144283588 144283587 144283864 277 CTTGAAGCTTGTAACCTCCTTTTCAGAGTCTAGAAGTCAC-----ACATATGAGGCTTTAAGTTTACTTTAAAGTCTTCAGCCTGTGGTGGACAATAATGTGGTTTCTGTTTTTGCTTGCTAGATTGCCTGTCTGTGTTTATTTGCGGGTTGCAGCTAACTGATCACACACCGTATCTGTTCCATTGCGGTAGACCAGTGCTATTTGCTTTGTTATTTTCCTGGGGGTTGTTTGTAAAGTGTTTCCAGACGTCAAACAACTGGGCTATTCCAAGCGCTCTTG chr4 + 94230402 31844706 31844705 31844965 31844706 31844705 31844965 260 CTTGAAACTTGT--TTTGCTTTTCAGACTCTAGAAATCACTTAACAAACATGAGACCAGAAGT-------------------CTGAGAGAGTCAATAATGTGGTTTTTGTTTATGCTTGCTAGCTTGCCTGTCTGTGTTTATCTGTGGGCTGCAGCTAACTGATCACATACCATATCTGTTCCACTGTGGTAAACCAGCACTATTTGCTTTGTTATTTTCCTCAAGGTACTTTAAAAAATGCTCCCAGACATTAAGCAAC-AAATTATTTTATGAGATCTTG ......:.....--::.x.........x.......:....-----.x.:.....:.:xx....-------------------...x.:x:.x..............:.....x..........x..................:..:...:..................:...:...........:..:....:.....::......................x::...xx...:x...:..:.:......:.:..:....-::::....::.x.x.x..... 12M2D26M5I18M19D178M1D21M 203/255 79.6% 260/94230402 0.0% 27/255 10.6% 112438882 77775673 +16514 chr4 + 190214555 144284175 144284174 144284522 348 AAAGTCAGTTCAAGTGGG---------TGACTATAACCTCTGGCAAGAGATCAGAGAAACAAGTTCAACCCAAAGTCAATTTAATTTTATTGGACCACACTGTCTCAGGCAATTAGAAAAATATTTGTAAAACATCAGATGAGAAAAAGG-AGTGTGGAGCCCAATAATGCCAAACAATGTTTATAAGAAAGAAATCATGAAGTGGGAAGAGTAAACACAATTATTCTATCAGCACCTCCTGTTCTTCTAAAGATTACTTAACTTACATTTAGAGAATTCTGAACAAACAACCAAAATAGTTTCTTGCTAACATACTCCTACCTCCAAAGTAGTTAGTTTTAAGAATTAAAAAAAAAC chr4 + 94230402 31845833 31845832 31846151 31845833 31845832 31846151 319 AAAGTGAGACTAAGTGTGCTGCCTCGCTGCCTACAACTTTTGGCAGTGGATCAAACAAACAAGTTCAGCAAAAAGCCTATGTAATTTTATTGGACCACACTGTCTCAAGCAATTAGAAAAATATTTGTAAAACATCAGATGAGAAAGGGGAAACGTGGAGCCCAATAATGCAAAACAATGTTTATAAGACAAAAAATGTGAAACTGGAAGAATAAACACAATTACTCTACCAGCACCTCCAGTTCTTCTGAAGTTTACTTAGCCTA-----AAAGG-----------------AAAATATTTTC-----------CTTCTGCATTTAAAGGAATTCAT------AGTTAAAAAAAAAC .....x..x::.....x.---------..x...:...:.:.....:x:.....:.x...........:.xx....:.x..x..........................:......................................::..-.::.................x.................x.:...x::....::x......:............:....:..........x........:...x.......:.:..-----.:..:-----------------......x....-----------..:..:.x.::....x.:..x:.------.:............ 18M9I123M1I115M5D5M17D11M11D23M6D14M 254/309 82.2% 319/94230402 0.0% 49/309 15.9% 112438342 77776213 +11009 chr4 + 190214555 144292802 144292801 144293193 392 AAACTAGCCTTTAAATTACTAAAAAAGACATAAATGCAAACATCACGTAGAGTGAATAACCAACACTGAGTGTCAGTTCTTTCTAGCTGTTTAGGTATGTGGCAATGAAATGACCCATGGATAAGAAAAATACACACGTTGGTTCTGTAATGTGCACTAAATAATCTGAAGCAGGGG-CAGCCACACAAGTTCTAACACTTGTGTGAACACACAGGGATTCCACGGAAAGGGGGTTAAGAAGGCACAAGGGGATAGACTAATCTTTGGGGGAAAATAAAAAAAAATAAAAGAATGAGGTTTAAAATTCTCCAGATACCAGCAAATGAACTTCATCCCTCGCCTCCGTATCCCCCCAAGGAACAAAAGCCAAATA-AATGTTGTCTTTGTCTTAC chr4 + 94230402 31851038 31851037 31851408 31851038 31851037 31851408 371 AAACTAGCTTT--AATTTCTATAAA-GACTTATATGTTAACTTCACCTAGAATAAGTTACTAATACTGAATGCCAGTTCATTCTAGCTGTTGAAGTATGAAGCAGTGAAACAACCCATGAACAAGAAAAATACACATGGTGGTTCTGCAGTATGCACTAAATAATCTGAAGCAGGAGTCAGCAAAAGCAGCTCTA--TCTTCCAAGATCCCACAGTGGTTTT-TTTAAAGGAGGT--AGGACAGAAAAGAAAATGTATGGATCGTACTGCTACCCT-GAAAACAGTAAATGGAAGAGGTTTGCAGATTATCATACACAGATGCATTAG--------------TTCAAACTTCTCAAAGGAAAAAAAAAGAAAAACAAAGCCATCTTTGTCTTGC ........:..--....x...x...-...x..x...:x...x....x....:.:.:.x..:..:.....:..:......x...........x.:.....x:...:.....::.......:.:..............:.x........:.:.:.......................:.-....x.x.xx..:....--x...x::x..x.x.....x.:..::-:xx.....:...--..:.x:x.x...:::..:x.:x:...x.xxx.xx.xxx.-:....x.:....x.:.x.......:x.:x.:x:..x.:..x::::x..x.:--------------.:.:x.:::.:.x......x....:xx...x.-..x.:::..........:. 11M2D12M1D151M1I17M2D25M1D12M2D39M1D51M14D32M1I19M 253/369 68.6% 371/94230402 0.0% 25/369 6.8% 112441764 77772791 +3451 chr4 + 190214555 144295210 144295209 144295282 73 TGCGCATGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTGCTTGCACCCGGGAGGTGGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.:......:.........:.::..:.....x.xx.x...x::....x....:.:..x.xx...:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 68262005 NA +3011 chr4 + 190214555 144296915 144296914 144296960 46 AGTTATTTTCCAAAGTGGTTGTGTCATTTTACATTTTTTTCTAAGA chr4 + 94230402 61622642 61622641 61622687 61622642 61622641 61622687 46 AGCTGTTTTGCACGCTGATTGTGTCATTTTACATTTTTTTCTAAAA ..:.:....x..x:x..:..........................:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 82674273 NA +10599 chr4 + 190214555 144305135 144305134 144305372 238 AAAAACTGGGTTAGAAGGAATAGTCTAGGCATATTTTAGGCAGCTTGTGGTCGCTCTGGTTAAAAGCTCACAACCAA--ACCACCACGATTTTACCAAGTTCACAACAGATTTTCAAAGATGATTTCTTTTGAAAATGCACAAAAGCCTTCTACATAGACATTTTAATTCATTGATTCAATTAAGAGCAAATTAAAACATGTAGTTCCACGGCAAACCAAATCCATATTTAAACCAGTTC chr4 + 94230402 31859872 31859871 31860107 31859872 31859871 31860107 236 AAGAGTTGAGTAAGAAGGA---GGCTCATTATATTTTAGGTAGTTTGTGGTCACTATGGTTGACAACTCTGAACCAAACACAACCAGGCTTTCACCAATTCCACAACAAGTTTTCAGGGTTGATTTCATTAGCAAATATACAAATGCCTCCAAC-TAGACATTTTAGCTGGTTGACTCAATCAAGAACAGATTAAGCTTTATAGTTCTAGTGCAAAGTATCTCCAGACTTAAACCAATTC ..:.::..:..x.......---.x..x:x:..........:..:........:..x.....:.x.:...xx......--..x....x.x...:.....x.:.......::......::.x.......x..x.x....::.....x....:.x..-...........::.x:....:.....:....:..:.....:x:x.:......:.xx.....x:.xx....x.:........:... 19M3D55M2I75M1D85M 173/234 73.9% 236/94230402 0.0% 6/234 2.6% 112445263 77769292 +7588 chr4 + 190214555 144335606 144335605 144336013 408 AATAACATCTTAAAATGAATTTAATGCACACAAAATCTCCTTTAACAGCTCAAAGCAAATTCTTCCATTTTCATAAACTTT------TAGTATGT---AAAACAAAAAGTAAATAAATCTGTTAAGGATATTATTACAATTTTAGGGTCTGAGCATGGTTATTTAAAAA---ACATTATG-----GAAATACAAATGAGAAATAATA-------GAAAATTTAATGTAAATGTAAAATAATTTATACAA-TTATTTTCTGTAATGCTTTATCTTTG-AAATATAG--TATTTCTAATGGTGCTTTGCTTTTTTAAAAAGCTACAATACA--------TTGTATATAATCCAGAGAGCGTGCATAGCAGCTCTGTTTAGAAAATAGGAAAGTACCATGT-----------------------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCTCTGTTTAGTGAGC chr4 + 94230402 31862157 31862156 31862626 31862157 31862156 31862626 470 AATAATGT-TTAATATGTATCTTA-------AAAACTGCAGTGAGCAGTGCAAAGTAAACACTTGTGTTTTGATTAGCTCCAGTCCATGTTATGTGTCAGAACAAAAACTCTTTAAAAACATTGGCCCTACTGT----ATTGTAGGACTTATGCATAATTATTTCAAAATACACAGAAAGCAGGAGACAGAAAAGTAATGAATAAAATAAGCAAAAAAAATTAAGAAAAGTTTTAGATATTACAAGCAAAGCATTTTCTGTAGGACTAGGTTTTTTTAAATCCAACATATTTATAAGGGTACCCTGCTTT---AAAAAGAAAAAAAAAAAAAAGCAGCTGTATATAAACTAGATAGCATACATAGTTGTTTTGTTTAGAAAACAGCAAAGTACCATGTAAAAAACTTTTTGTTTAGCCAGCCCACCCACTATGAAATGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCTGACATTTAGAAAAC .....::.-....x...x..:.x.-------....::x.xx.x.:...:x.....:...:x...x::....x..x.:..::------.:x.....---.:........x.xxx....xx::..::xxx..:.:.----...x....:::.:x....::......x....---...xx.x.-----..x.x.x..:.:.x:.....x.-------:....x....x:x..:.x.x.:...x.x:.x:...-x:..........:x:..xx:.:...x-....x:.:--.....x...x...:.::......---......xx.x..x.x.--------:.........x.:...x...:.:.....:x.:.:...........:..x............-----------------------------------------............................:..:xx::.....x:.:. 8M1D15M7D50M6I8M3I36M4D31M3I8M5I22M7I35M1I26M1I8M2I23M3D16M8I61M41I46M 271/393 69.0% 470/94230402 0.0% 92/393 23.4% 112473449 77741106 +44646 chr4 + 190214555 144356219 144356218 144357270 1052 AAACAAAAAAATAGGGATACCTTCACAATAAAACTCTGTAAAATGCACAAACTGAC----ACGTTTTAAATGACTCTTTAGTAACAGGGGAGAAAAAAAGCATATGAGGTAAATCCTTCACTGAGTAACTCACCAGGGAGACTGGTAAAAATAAATTGCACAGCTCTAATTTTCCTAGCAGCTTCCATGCTATTCTTTGAAACTGAGTACGAACCCCTTGGCCTAATCCCAAGAGCCGATCTATAGTAAATAGTGCACACTTAA-GCCTAAGTTCCTTTTTAGCACCATTCAGACAGTGACTTCAGCCGCAGAGCTTAGTCATAGCAGACATTTTTGTGGTGAAAGCATTAAACCCACATGCAGCTCTCTTTCTGTGGCCACTGGGGGTCATGCTCCCTTCCCATTAGCTGAATAAATCATAAAGTCGGCTCAGACCACCCAAGGAGTGCGACCAGCAAGCCACAGGCGATGCCTACAGCCGGTTATTTCTTTTCAGAATCTACAGGGGGAAAAAAGCAGAAAAAGAAAAACAAGAAAA-----AAAAATACACTGCAAAACAGACTGCCTGTAGGAAATCATTTGA-----------------GTTTTTAAAAATGTGATCTCTTTGAGAGTAACCCAGTGTTTTCTTGTTTACTTATTTATTTTTTAGTTAAAATCAGGGAGCCTGATTTAAGAAGAAAAGTAGCCATTGAAAAAAT----AAAGTCACATGCATGCCTTTTGTCATATGCTGGAGTTTGCTGACCAAAAAAAGAAAAAAAAAATCTTCTCTGTGGATTTTAAATTAAGGAAGGCCACCCTGTGTGGCCAG-GCTCTTCAGGTGGTTCCGATAAGACACAATGCAGATGCAACTGGGGGGCCCTGCATCCGGCTAGCTTACGTAGCCAAACGGGATTTAACGAGGAAGCAAACGTGTTGTCTAATGTTCCCTGTGTCAAATGATTCACTCCGCCCAGGAAAGGGATGGGGTCCTGGAGGAAGATCTGCAAGTC-----------ACAAGTTCCCATCAATCAGTAAATAAGATAAGAAATAGGAATTTTAAACATAACTATTAGCAGGCAACT chr4 + 94230402 31876830 31876829 31877850 31876830 31876829 31877850 1021 AAAGTAGGAGATGGGAAAATGTAAACAATAAGTCCC-ATAAAACTCACAAAAAAACGTGTACATTTTGAATTGCTCTTTGGTAACTGATAAAAAAAAGTGT-TATGAAGCAAATCCTTCACTGGGTCACTCGCTGGGGAGACTGGTAAAAATAAATTGCACAGCTCTAATTTTCCTAGCAGCTTCCATGCTATTCTTTGAAACTGAGTAAGAAACCCTTGGCCTAATCCCAAGAGCCAATCTATAGTAAATAGTGCACACTTAATGCCTAAGTTCCTTTTTAGCACCATTCAGACAGTGACTTCAGCCACACAGCTTAGTCATAGCAGACATTTTTGTGGTGAAAGCATTAAACCCACATGCAGCTCTCTTTCTGTGGCCACTGGGGGTCATGCTCCTTTCCCATTAGCTGAATAAATCATAAAGTCTGCACGGACCACACAAGAAGCGAGGCTAGCAAGCCACAGGCAGTGCCTACAGCCTGCTATTTCTTTTCAGAATaaaaaaaaaaaaaaaaaaaaaaagagagagaaaagaaaaaCAGGAGAGAAACACAGCACAACAGCCTAGCTGTAAGAAATTACTTGGTTTCTTTCTTTCTTTTTTTTTTTTTTGATTTGATCTCTTTGAAGTCCACAGAG-----ATTTGTTTGTTTGTTTGTCTTTT-----AACCCAAGCAGCTACAGTGAAGGAAAAAAGCAG-----AGAAAAATTTAAAAAGCAGCATGCAATTCCTTTGTCCTATGCTG------------CTACAGTAGAAGGCAAAAA--TTCCTGGTACTCTGCTATATAATAAAGGCTGTCATATGATACAGGAGCTCATCAGACA----CCATAAAGCAAAAT--AGATGTTG-------------------------------ATTCGAACAGCGTTGAACAGGGAACCAAG-ATAGTGTATGATATTTTACACATCAGGTGATTTATTCTGTGAATGGAAATGAC--AGTCGCTGAGCAAAGTCCGTAAGTCTAGGGGTTGGTTCAAGTTCCCATCAATCAAGAAATAAAATAAGA---AGGAATTTTAAACATAGCCATTAACATGCAACT ...xx.::.:..:..:.x.:x.xx.......:x.:.-:.....:x......xx:..----..:....:...x:......:.....x.:x:.:.....:x.:-.....:.:.............:..x....:.::..........................................................................x...x.......................:..........................-...........................................:..x.....................................................................................:.............................x..x.:......x....:..:.x.:.:..............::...........x.:................xx.x.:::::......:x.:...:...:.:.x.......-----.:.:.x....x...x.....x..:x.....:.....:.:...:-----------------x.....xxx:..x............::x:x..xx..-----x:......::..:...:.:....-----..x:..:.x...:xx.x.x...:.:.....:..-----::......----....:x:......xx:.:......x.......------------.x.x.:x....::x.....--...::x..:xx:.x:x.xx...x:.....:::.x.:..xx:.x:.-....x....:::----.x....::..x...--.....:x:-------------------------------.x:.:...:.x:..x...::....x...:-:.:x...x.:..:..::x::::...::.....:.:..:.:xx.x.:..:x..:--:...x:x...x..::..:.:.....-----------x.................:x......:......---................:.:....:..x...... 36M1D19M4I41M1D162M1I274M5I43M17I36M5D23M5D33M5D8M4I32M12D19M2D45M1I12M4D14M2D8M31D29M1D53M2D25M11I33M3D33M 753/978 77.0% 1021/94230402 0.0% 117/978 12.0% 112479389 77735166 +7074 chr4 + 190214555 144357797 144357796 144358340 544 AGCTCTGCCTAAAATCTTTAAAGCCCTCATCTGCAGTG------ACCCCCTTGCTG----------CTCAAGAAAGGACAGCCCCTCGGTCTACACTGGGGCATATTACATGGTGATTTTGAGACTCTTGC------CCACCAGGGAGGAGGGCCGGTTCACTTATATCAGTTACATTTGTGACTTAATATGGTGAGTTGTAA---GGTCACCCTCAATCAAAGCCATCT-----TGTATTGAAGCAATTTTAACTGTCAACAGCCTATGTCTTAAAAA---TCTCACGAGAAGACAAGTGAATCCACCTGTTGATAACCTACAGCCCATTATGAATTTGCTAATTAAAATTTCCATTTGCTAGATTA--CACAACTTTAACTGT-GTAATAAAAAGCT---GCTTCCAAGGTAAACCAAAAGCATTGTAAACAAAACCCCTCAACCACGAGG-TTTCACTCATCCTTGTGATGACTTTCATTTCTGTTTTATTCATGAATATATTTTCCACATCATTGAGAGCATAAAGCATTCTTAAGTAGATGCTTTGAACCATCCTTCCTG-AGTCAGAGTGCTTGGAAGA chr4 + 94230402 31878446 31878445 31879014 31878446 31878445 31879014 569 AGCTCTACCAGTAATCCT--AATTCCTTACCTGCAATATAACTTATCCTTTAGCTATTATAGTCCTCCTGAGCAAAGACAGATAATCATGTTGAATTGTGACAAATTATACAGTGGTTTTGAGATGTGAGCAAGCACTCGCAAGGGAATAGGGCAAGACCACTTAAATCGGTTTCATTTGTGACTTAATATTGTGGGTTAAAACTTGTGTGACCTTTGCCAAAGACGTCTCTATATGTGCAGGAGAAAAATCAAGT--------CCCAGGTCTCAAAAGATTCCTAGCAGTAAGATATATAGTTT--CTGACAGGTCACCCAAGGCATAGCCTGAACTTAATCATGGAA--TTCTTAGTGATGGATTAAGTACCACTTTAACCACAATAACAATAAATTAAAATCTCTCAGTTAAAAAAAAAAAAAAAAAAGTAGAACTGTATAACATTTAGGATTTCATTCATACCAGTGGAACAGCTAGTATTTAACATCTTCAT--ACACATTTTCCACACTAGAAAAAGTAAAAAATATTCAGAGACAGATCATACAGAGTGTCCTTCCTGAAAGTGGAATGCTCAAAAGA ......:..x:x....:.--..x:...:.:.....:.:------.:..::.x...:----------.:::..x..:.....x:xx..:xx:.:x.:..x.:..x....:.::...:........:x:xx..------:.:.x.....:x.....x:.x:......x...:...x.................x...:...:x..---.xx::x...:x::.....x.:...-----...::x.:..x..xx.:..x.--------..:.x....:....:---:..x:.::x....:.x:.::x.:--.:x::x.:.x...:.x:..x:.x:x....:..:x.x..x:..--...:xxx..x.:.....--:..x........:::-:...:..x..::.---:::..:x..x....xx....:x.xx:x..::.:...:x:x:...xx:x...-.....:....x.:x...:x:xxx:.x:.x.:.:x:x.x.....--.:.:..........::.xx:.:..:.x...::....xx.:::....xx.x:::.x::.........-.:x::..:....:::.... 18M2D18M6I12M10I65M6I66M3I24M5I21M8D15M3I23M2D42M2D17M2I15M1I13M3I51M1I43M2D66M1I19M 314/528 59.5% 569/94230402 0.0% 57/528 10.8% 112479351 77735204 +37319 chr4 + 190214555 144370240 144370239 144370723 484 CCATTTAAAATCACTTTCCAAAGAGAGATGTACATTTTGGGCATCTGAGTATATTTGTAGAACTAGTAGTTGTGGTAACAAGACTAAGTTTACATGTCTGTCCACATCAGCACCATGTACTCAAGATGGATTTCAGCTGCCAAAAAGGTCACTCCAAACTGCTTGCACAAACCTGTCTTTATGCCCCTGTTTATTATGCTCCCATGTAGTAGATGTCTTAGGCACTGAAACAGTACAGCCATATATCAACAGCTCTCTGGTGGTTCCGAATGTTCTAAACAAGAGCAAGGGTGCACTGAACCTCCCATGTAAACTTTATACAACAGATTCAGCAGAACTGTAATTATTTACAAAATGATGGCATGAGAAATCTCTGGATTTATATCTTACGTTAAAGTAACTTAGATGGTGTCCACATAATTCTTGAATTCGTGGTAGGTTAGCAATTTATTTTGTTTTATTTTGGTTGCACTTGATACAACTC chr4 + 94230402 31880720 31880719 31881202 31880720 31880719 31881202 483 CCATTTAAAATCTCTTTACCTAAAATGATATACATTTTGAGCATTGGAATATATTTGTAAAACTAGTAGTTGTGGTAACAAGACGAAGTTTACATGTCTGTCCACATCAGCACCATGTACTCAAGATGGATTTCAGCTGCCAAAAAGGTCAATCCAAACTGCTTGCACAAACCTGTCTTTATGCTCCTGTTTATTATGCTCCCATGTAGTAGATGTCTCGTGCACTAAAACAGTGCAGCCATATGTCAACATCTCTCTGGTGGTTCTGAATGTTCTAAACAAGAGCGAGGGTGCACTGAACCTCCCATGTAAACTTTATACAACAGATTCAGCAGAACTGTAATTATTTACAAAATGATGGCATGAGAAATCTCTGGATTTATATCTCACTTTAAAGTAACAGAGATTGTGTCCACATAATTTTTGAGTTCATGGTAGGTTTTTAATTTACTTTCTTAT-TTTTGCTAGGATACGATACACCTC ............x....x.xx.:.:x...:.........:....:x..:..........:........................x..................................................................x................................:.................................::x.....:.......:.........:......x..............:...................:....................................................................................................:..x..........xx....x..............:....:...:.........xx:......:...x..x.-.....x.x.x.:x:......x... 459M1D24M 437/483 90.5% 483/94230402 0.0% 1/483 0.2% 112489520 77725035 +3446 chr4 + 190214555 144372476 144372475 144372555 80 AGTAGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTTAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.:...:.--....:.:...........::........x.xx.x...x::...x.......:..x.xx:..:..:.. 11M2D67M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 68339276 NA +43460 chr4 + 190214555 144375345 144375344 144377126 1782 ATGCTTTGTCATAAACATTATATGATATGGTGGACAACATAGTATCAAACACTATAGAGTTGAAAGGTTACTTTTTAAAAATTGGACCC----AAATGATTATAACTTTCCACTGGTAAGTTTAACATTCTGCAATCAT----GTGTCCACAAGTGCTGTTAACCAGCTCCACTGATGCAAACATTTCTTTGCAAGCATTTACTGAGATATTGTAAATTACTTAAC-TGCAACAGTGTAC-TTTCCCTCCCTTAATCTTGATCTGATCCCTGAGGGGCTATTTATTACAGATATATACAACTTGTCATTAGAAGTGATGTTAATGTAATATGACACAAGTAGCACACATTGTTTAAATGTGTTCCAGAAAGTTAGCAAATTTAGTTCAGTGAATACTTACATGATCTTCTGCCTGAAAAGCAGTAAGAAAGAAGTGAGGCAAGGGGGGTACGGGCAAAATATTAAACACTGC---TCACTGTAGGTGGCCAATTAATACCCTGTATCCAAGCTGGAACAAATCCTCCCACTATATACATAAAGCATATAATCTCTTATCTGCTTAGGCATTATCAAATATTTTAGCAAATCCTAGTAACTTCAAACACAGGTTTAATGGAATGCAGTGCTAAAACATGCAAAGTCAAGAATCAAGTTTTTAAAGAACATAATCTGTTTTAGAAGGTTTCAAGAGAACTACTTTGCAATGACATTATAATCTTATCCCATGAAGAAAGATGTCTGATTTGGCAAAACAACATTAGACGTGT-TAGAGCAAAACGTACAATTTTGCCTTTCC-------------------AAAATTAAAGCCATAAGCAGGAAAATCAT--TTTAATTCTTTAGAA-------GTTGAAAGA---------GTTTATAACTATTGGTCTGGTTCTC---AACATTTTGTCCCCAGATAAT-ATTAATTTGAGAGGGAATTCTCGTAGA---TGGCCACATACATTTACAATATGATACAGCTGGGACATGTGCCAATATTAATTCAACATTGTGGTTTGCATCTCATCATCAAGTTAAAAATAACACAATTAATTAAACCACAAACATGGAAAAAAACCTAACATAATCAATACTATAGTTCTGACAAAATTTCAGTTTTTACTTATACAT--------ACTTTTACTTTAAAATGGATCAACTTCTCCCCCAAGTTATACTGTCCCTTTTTTTTACGGATAAACTGGGATGTATTTTAAATGTCTTTTCATCTTTTCCATCTTCATCTGGGATTCTGCTCATGCACTCAGGGTGGTTTAGATGAAAGATCAGAAAGTAGGTAAAGTGAGAGAAATCTCCTTTTCAGAGTGAGGCAAACACAGCATGAAGCCAAAGAGAAAACCAAAGAAACAGTCAGTGAAAGACAGACAAAATTGCATGTAGA---AAACTGATCTTTCCATATATTTTAAAGCA-CAAGCTATGTGATAAACTTGACTTACAAGCGTA----ACATTTTATGCTTTTTATACAAACCAGAATACATACAGCAAGAAGACTGTTCACAGCTAAAAGCAGAGAAATTAAA--------------AAGAAAAATAAAGCAAACCATCCTATTTTTATTAAAAAAAGGAATGATTTGCGTAGTAGGGTTTGCATAGCTTAAGAAATCTAGTGCTTGTGAGTGATGCAAGATAACACTTTCTTGTAATTTTATATAGTAAGCAAAGATTTAGAATATTTACAGACCACCCTGAGTAAGAACGTCACTGGATTCTAGGAGCATGCTCATACCAGAACATTCATCTTAAAAAAAAAAAGTACCCAATGGCCCTCAGG-----CCATATATGGCTGTAGAGGGAGGTATGCCTTTGACCTT chr4 + 94230402 31882974 31882973 31884629 31882974 31882973 31884629 1656 ATTCTGTATCATAAACATTCAGTGTTATTACAGACATCATGGTATCAAACTCCAGATAGACTGAGGTTTTAGGGGGAAAAATTAGACTATTTAAAGCAATTATAACTTTCCACTTGATAGTTTAACATTCTACAATCATTACTGAGTCTGCAGGCACTGTTAACCTGTTCTAGTGAGACAAACGT--CTTTTCTAATGTTTACTGAGATATTGTAAATTACTTAACGTACAGCAGAGTACGTTTTTCTCAGTTAATCTAGATCTGATCCCTGAGGGGCTATTTATTACATATGTATACAACCTGTCTGTAGAAGTGAAGTTAATGTAATATGACACAAGTAGCACACATTGTTTAAATGTGTTCCAGAAAGTTAGCAAATTTACTTAAAAGAATACTTACATACTCTTCTGCCTGGAAAACAATGAAGAAAAGG-----------------ATTCTAAATATTAAACACTGCTGTTCACTGTAGGTGGCCAATTAATACACTGTATCCAAGCTGGAACAAATCCTTCAAATATATACATAAAGCATATAATCTCTTATCTACTTAGGCATTATCAAAT-TTTTAACAAATCCTAGTAACTTCAAACACAGCTTTAATGGGATGTGGTACTAAAACATGCAAAGTAAAGAGCAGAGTTTTT-AAGAACATAATCTGTTTTAGAATGTTTCGAGAGAACTGCTTTGAAATGCAATTATAATCTTAACCCATGAGTAAATGCGTGCCATCTAACAGAATTATGTTACATGAATCTATATAGAAAGAGATAGCCTTGTGTTTCCTAACACCCATCACAATCTGAAAATTGGGATT-TAGACAGAAGTATCTTGAGTTGGTTCTAAAGAGCACCTATGTTTGAACACAGGAGCACACTTATGGCTATTGGTTTGGTCCCTGCAAAAGTTTTATTTGATGACGAGAATTTATTTGATAGAAAAATCCAACAGGATTTTACCAC-TATTCTGGCCTTGACAAATAGTTGAAACAT------ACTTTAACACAACTTTTGTGTCTTCATCTTGCTGGC---TTAAAATGAACACAACGCATCTTAGTCTCAGGGTGCATAAAGGTC-AGCATATGAGTTGCTGC-TTCCTAAGAGTGTCTCAACATTCCCTTACACACATAGTAAAATGTCTTTTTTAAAA------GACCACATTTCCAGTTTA---------CTTTGTGCACGCAGAA------------------------TACATGTTTTTCACACTGGTCTGG---TCTCCTTTTGTTC------TGGTTTA--------------------------------CAGTTGCCTTGTCAGCATGA--TTGACACAAATTAGATCTACTTTGAAAAC---AGCAACA-TGGGTTAAAAATCTCTTCTATTGC-TTCAGATACAAAGTGA-----CAAACTGTTTCAGGTCAGCATGTTCTGTGG----------GTACAGGTACAGTTCACACTTGCTGCTTTTAATTCTGAC-------------ACAAGAA------TCACTAC------CTGGTAAATTAAATTTACTATATTTTCACAAAGTATATTGCAA--------TTGTCAATTAAGGAAAGAAATGACT-----------------ATA-------------------TGCAAGTGATGCAAG---------TCTTGTACTTTAATACAGTAAGTAAAGCTTTAGTCAATTTATAGACCACCCAGTTAAAGTACATCAGTGAAGTCAGTGAAGATGCTTTTTCTAGTACTTTGATGTCAAAAGAGAAA-----TCAAAAGCAGTGGGGTTTGACCATATATAGTGACTGCAGAAGGCGTGCTTTTGATCTT ..x..x.:...........xx:..x...x:::....x...:.........x.:.x.x..x:x:.:.x..xxxxxxx.......:...:x----..:::................x.xx.............:.......----.x...::..:.::.........x.:..:.x...x:.....:.--....x.x.:::............................-.:..:...x....-...::...xx.......x..............................x..:........:....xx.........x.................................................................x..x.:x............:x...........:...:..:.:.::..:.:.-----------------:xx.x................---........................x.........................:.x.x..............................:.................-.....:.........................x........:...::..:................x....::x:.......-......................x.....:........:.....x....xx............x.......:x...x::..x:x..:.::..:..:x.::...x.:.x:.-..x.xx:...x:x.:.:::...:x.....-------------------......::::::-..::...:.:x...x.--x..::....xx...:-------...x:..x.---------::....::........:....:.::---..x:....:.::xxx..::.x-...x......x..::..x..:x::..:---.x:....-..:x:.x:.xx.:xx.x.:..:..::....------.:x....:x....x..xxx..:.x.....:::::x.---......xx.......:xx..:xx.x:x:x.:x:..x.x...:::.-.:....xxx:x.:..::-x.:..:.x.:x:.:...::x..:x....:...:--------.:x.:.x:.......------:..:x.x:::...:x...---------:...x.x:...x.x..------------------------.x...x....:..:x:.x:.....---...x..:x..:x.------.......--------------------------------x.:.:x....x....x:...--:x:.....:xx.::.x.:.xxxx......---..x....-.x:..x...:.:xxx:xxx.....-.x:...---...x...-----.x.xx.:...:.::x..-..x.:.x....:----------x....:.:::.----...:..xx.......x..x.x:..-------------:......------....x:.------.x.:x........--------------.x:..:x...xx....--------x.x.:x.....::....:.....:.-----------------...-------------------..::...........---------.......x...x...:......:....x.....xxx.....:.........x.xxx...x..:...x..:.x..x:x..:x.....:x.x.:..x..x..x..x.:....:.:...-----:...x:..xx.x:..-----........:.:x::x.x:.:...::...:.....:... 89M4I46M4I42M2D39M1I13M1I193M17D21M3I103M1D81M1D109M1I29M19I12M1D16M2I15M7I9M9I25M3I21M1I27M3I7M1D30M6D36M3D45M1D17M1D33M8I15M6D18M9D16M24D24M3D13M6D7M32D20M2D29M3D7M1D24M1D6M3I7M5D17M1I12M10D11M4I24M13D7M6D7M6D13M14I16M8D25M17D3M19D15M9D116M5D15M5I38M 1119/1563 71.6% 1656/94230402 0.0% 312/1563 20.0% 112492371 77722184 +24167 chr4 + 190214555 144381215 144381214 144383543 2329 AAACACCTGCGGTCAAATGTATCTTTTGGTCTCTGTGT--GTTCTTTTAGAGAATTAAGAGCCTTGGCCTAGAACATTTCTTTTGGATAAATGATCATTAAGGGTTAATGACCCAATGTCTTGCTTTAGGCCAAAAAATATTCCTAATCGGTCATTAGTCTCCCCCTCCATGTCCTGAAACTCCGTAATAATTGCTTAATTTAAGC----ACAGTCTACTATG-CACACAGAACACTCCCT---ATCTCTGTTTTTTAAACATAATGAGCACAGATTTCAGTGAGTTTAATCAGTTGTTTACA-TATGTTGT---------------------TTACATATGAGTTGGTTCTTGGCAATAACATAAGTTATGTCTTTCATTTTTATAAAAATTTAA------GCATGGTGTCCTAAGAGGTCAGATCATATTGGTTATTTCCTCAAAGGATCAACATTTTATATCTATATATTT--TTACGTTTAAATATTTTATTT-----------TAAATTGAATATTTTAAAAATTACAAACAGATTAAAATTTTATGTAATAATCTGCTATGTTACTCTCTTGTCACCTTTTCTCTCAGCACAAAATTTGATCTGTTTCTTAAAATATACAATAGTAATTATGTAGTGATGGTGTGACTCATACTTCTTTGGGCAATTTGATACCATAAAATTTAAGAAATATCTTGAATCTCTTAAATTAGTAATGGTAAAATATATCATGGATTTTTCCAAAGATT-TGCTTTACAAATATTTACTGCAGCACAAAACTTTGTTATATTTCTTCAGTCTGCTTGATAATCCCCTGATTAGACCATCTCATGCTTGGAGGAGCCAAAGAAAAATTGTAGAGCTTGCCAAAGACAAGTATACTGTGTATTGCTTTTAAAATTCTATTTTTTTCAATAGCTTGTATTTTTTTCCTGATAAAATAAATGATTTGGACTAACAAGCCA--CTCATTGATCTTTGACCTTTTCAACCA-CATCAAAGCTTCTTAAAAGCCAATTAGTGGAAGTACAGAGAAAAGGTCATTTTATTATAGCACTCAACACTGGAA-CCACAATATTGTACATAGATTTAAAT------------TATCCCATGGCTTTCATTAGAAAAATAGAAAGATAAATTCTACAATCCTAA--AGCAGGTTGATATTTGCTTGTACAAATGATTTTACTTTTC-----CTTCAGGCTGAATACAGTAATTTTCTTAG--CACAGCCAACACACACAGTCACTGGTAAATGCTCT----CTTGATTATCTCTTTTGATGTAGGACAGGGACAACACTGATAAATGATGTCTATTGATAATCCCCAAGCCTCATTTTAGACACTGCCTTTAATTGCTTTC----TGAAAACAGCTTTTTGTCAGACTAT--------TTCAGAAGAAGTAATACATAAAAGATTAAACATTTACTTT-----------TATTCTCGTTCCCCCTTTTCT---TCTCCAATAGTGTTTA--TTATAAGCAGGATAACAGAGGAAAGGA--AGAAAATCAAAG------------ACTTGGAGGAACACAGAATTGAATCTACACCCTTGGAAATTAAAGCAATTATTTTATTAAAAT-----AATTATTTAATATGTTT--------GTAATTAAATTTCTAAAATTCAGGTATTTCAAGGATCACGTGTTAATTTTTCTGATTTGATTTGAGGCTTCGCAATTTGCAAGGCCCT--------GGGCTAGGTAAACTCTG--GAATATACAATAAAAGAATAG------------------------ACATGGT-----------TAATGTCATTAGAAAATTATAGTCA-----------------GCAGAAGATGTTACAAATC--TTCTGGAGTTGTGCTGGAGT-----ATGATGTCT------------TTCTGACAGTTTAATAAGAAATAGT----AGAAATCATTTTGATTTTTGT-----------------------AGCAGGTGTCTTCCTGTGGTTAGAAAAG------CAATTCACCTCAGTTGAAAAATGAGAGTATTGGATTTTTCTCTGAGCAATCATTTTTGTATATGTGGCAAAAAAATAAACAAGTATACCCCAAATACCCTATAAAACCCTAGAACAAAAATCTAAATATATTTTAAAATGAAGCATAATGCTATAATCTAAAAAATATATGGAACTGGTAGAATAAAGTCACTTGTAACATAC----------AAGATCAGGTATTGAAAAATTGTATTGGACTTTGATATTTTGAGCAGGAATTTCCAGTCCTTTCCTGAATGCTTTTTCTTTAAAGTAGAAGCAAACCACGTTCATCAAAACCAGATGCTAATGTTTCTCTGTTCAGTTTCAGTTATCAATATCAAGTTTGAAAGA-TCAAAACATTTTTGTAAAAAATTGACTATGCTTATGATCAACTCACATTCACCAGGATGACATAAGAT---AAGGTCCATAAGTACCTTTGAAATGAATAAAACAAGATC------ATTTAGACCACATTTTTCTCTTGAATTTTTCTAAGCA----AAAATTACTTTTTCA chr4 + 94230402 31889193 31889192 31891582 31889193 31889192 31891582 2390 AAATACCTAGGTCCTTTTGGGTTTGTTTTTCTTTGTTTTCATTTTCTAGGAGTAATAAAGACCTTGGGGCAGGGCATTTCCTTTGGATTAATGACCGGCTGGGGTTAATGGCCAGGAGCTGTTCTTTGGGCCATCAACTTCTCTCAGGCGGTCAATTAATCCCCAGGAAATGCTCTGTGCCTCAATCATTATTGCTTAATTTCAGTGCAAACAAACTACTGTGGCAGATAGCATGCTGTATGGGATCCCT------TAAGCACAAGGAGCAGAGATT-CAGTTAATTTAATCAATTGTTTACACTATGGTCTATTTTCTGTAGCAAAAGGAAATCACAGATTTTTTGACTCTT-------ACATGAAATCTGTTGGTTGGTCTCATTATAATTTAATAGACTGAACCATTTCTGTGTGAGTTAT------TTGGTTTGTCACTTACATTGTCATTGTTAT-TAATGATAAGCTGGATGGCTATTGCTCATTTTATTTCCTGGCACAATTTAAATGAATGCCCTAAACATCATTTACA------AAATCCATTTACCGATGAGAC-TGTTACT------TCATCTTACATATAAGC----------------TTATTAAATTTTACAAGATACCTCATTT-----------GACACATCCT------GACATTT----ACTGGACAGTTTCAGGAGTGCCACAGAGTTATTAAATTATCAGCAGTAAAATACAACATGGACTTTTTCCAGGCTTGTGCTACACAAATATTTACGAGAGCACTGAATTTTGTTAT--TTCTCTAGTCTACTTGATAATCCCCTGATTAGACGTCTCTATGCTTGGTGGAGCCAAAGAAAAACTGTAAA--TAGTCAAAGGCAATGAAACC---TATTTGTTTTTAATGGCTAACTTTA-CAATAGTTTGACTT------------AAGAAAACTACTTCATCAAACTGGCCAACCTCATTGATTTCTCAGCTTTGGGACTGTCACAAAAGGATTCAAAGAAACTATTAGT-----TGTAACTGAAAGCTACTTTTACTACAGCTTTAAATGCTGGAAACTTCAGCAGTGTAGATGCTGCTAACTAACTGTGGTGCTTATCC--TGTCTTTCGTGTGAAAAATAGAGTTAAAACTTC---AAATGTAGGCAATAGGTGGGTGCCTATTGTCAAAAGCATTTATTCTTTTCTAAACCTTTACTCTTAATTGAGA-----TCCTAGTTCAAAGACAATAC---CATGCTGAAATGCATACTCTGGAGTTTAAATTACTGTTTTCATGCA-------------CCTGGTA-----------------------------TATTCTTTACACT-----TAGATGCATTCACCATGAAA------TTCCACCATGGTATGCAAAGCGTCCAGAACATGTGTCCTGTAAATATTCACAGCTTTACATTGTTGTGCTAGGCACTTTGCTGACTCCTTCTCTGAATCCAAGAGAGAGATTAGGCTGTAAAGTCAATGACAGAACAAGAGGTTGGGTAATAAAAATTCACCATCTTTACTGGGCAGAACTCAAAGTATAA--------------AACCTAAGCAGATATCTAGGTTGAATTTCCAAATAAGTTTATCCACTTCACATAAGATAGATGAGTTCCTAAAGAGAAGATGCTGAAAGCTTTATTATTATACTCTACTACCACTACTTG-----------TCTGGAAGGCACTCCAATGGTGTGC-AGGTTCCCTGTGAAGAACATAGGATGAAATGCTAGCAAACCTGAACTGAAGGTAGTGAAACAAGGTGGTCTGTTGCATAATTTGTTTTGAAAAC-ATCCTCACATTTTTTCCCCAAAATACAGCGTATGTCAGAAGTTGGTTTTTATATGGTTCTGCAGTTTACAAGGATGTTTCAACTTATTCTTTTCTTACA-TATGGGAAAAAATTATCTCCAGAAAGGATTCCCCTATTTGTCCAGACTACAACAAACTTATTGGAACACACACATTTCAATATAAAAAAAAAATAGTTTGATATACATTACATGGAA---GAAAGTAGCTAAGTTT------AAAAGTTATGGCAGCACTCAAAGCAAAGAGCTTTGCAGGAGCATAAGAAGCACACAACAGGCTTTAAAAAAAAAGCACCAAATATATTTCAAA------TATGACATTTTAATCTAAAAAGTATGAACAACTGGCTGAGTGAAGTCACCCAGGTCATACTAAGCATACAGATGTCAGGTACTGGAAAACACTATTGTACTTTGATTCTCTGAACAAGAATTTCCAGTCTTTTCCTGCATGGTTTTGCTTTCAAGTATAAGCAGACCACATTCATTAAAACCAGATGCTACTGTCTCTTTGCTCCATTTCAGTTATCAATATCATGTTTGAATGATTCaaaatattttaataaaaatttGACTGTGTTTGCGATCAGATCAGGTG----AGGTTGGGTTAAGATGCCAAATTCCACAGGTATTCTTGCAAAGAGAAAAGAAAAATCCAGATAATTCACACTGTACTCTCCTC----ATTTCTTTAAAAGTTTTTAAATTACTTGTGCA ...:....:x.x:.xxx..x:.:.x..xx...:...x.--:..:.:.x:...x.x...:::......xx:..::......:.......x.....:.:x:x:.........:..x::x.::x.x....:.....xx..x.x:..::.:x......x.x:x::...xxxxx...::...x:x...x:.x..x............x..:----...:x.....:..-..x.:..x.::..x:x.---...:..------...:..:..x.....x.....-....x.:........:.........-....x.x.---------------------.:...x..xxx...::....-------....:.:x.x...:xx.::x.:.:..x.x.......------.x.:x:.x..:xx:x::..:.x------......xx.:x..:.x.xx:...x::..x.-..x:x...x::.x--.x:.xx..:xx:.........-----------.x..x.....::::....x..:.:xx...------..x.::..x..x::..xx.x:-.......------...:...x:x.x.x...----------------..x.....x.x.....x.xxxx.:..x.-----------...x...x..------.:..x..----..::x.x.:...x..:.:.::.x:::.x:.x........x:.:::........:.x......:....:.x.:.x..-....x:............x:x.....x:..:........--....::.....:......................xx::::........x...............:....:.--.x.:.....:...xx.x..:---....xx....x..xxx...x:...x-......:...xx..------------..:x...:x.:..x:x.x...x:....--.........:.:.x.x....xx:..::-..:x....xx.::x..:.:x.x......-----.::.:xx:....x.xx.....:..:...x:.x..::......-.:x..::.x....x..:xxx:...x.------------.....--..x.....:.xx..........:xx.x..x...---..x:x..:--.::....x.:.:::.::.xx:.x..:::x..x.x......-----...:.xx..x...xx..x-----..:...--..x..x...:..---..xx.xxx::.:x..:....----:..:.x.xx..x....x...:.-------------x...:..-----------------------------:...:.xx.....-----..:x...x...----.....------..::::..x:x...--------.:.....x.x..:x:x::....x:x.:.x.xx.....x..-----------:.:.:.xx.xx.:....:...---..:xx:.x..x.x...--:.:...:xxx:..:.....:x..::.:--:.:x...x...:------------...x..x:....x..:.:.xx..--------------..::x.....:x...:.x:x.x:...-----...x.x..x..x:::..--------:..:x.:.:..:.....:xxx..:.::.xx...xx.:.:xxx.xx.:.:.x..:x:x:x.:...-----------.:..x.....x..--------.x..-....xxx..x..--...:...x:..:...x:x...------------------------...x...-----------....x.xx..x.....:-..xx...-----------------:...x:x....:.x..:.:--..:.x:x:.x..x...x...-----.x.....:.------------....x...-.x.::x..:....x:.----.....xx...::xx.x.....-----------------------.:..x::::x..:.x:.:xxx.:....:------::..x:..x.:.xx..:..---..:....x:x:.x...------.:x.:.:..xx:x.:.:x::x:.....:.:x.xx:..:.x::.:xxx..::..x.x.:.::x:::x.:..x...:xx.:..........:...------:..:.:::.x...........:...:x:x......:x..:.:.......:::x:x.....----------:.x:.......:..:....:xx.....x........x:.:...:..:............:.......x...x....x....x.....x.....:.....:.....:..............x...:...:..:..x:..................x.......x..-......:.....x:......x......:..:..::.....:x...x:.x----...x..:xx......---..:x....:.:...:::...x..x..:x...:x..:...------...:.x..:::.:.:.:...----....:.:...:x:----x.........x.x.. 38M2I166M4I13M1I17M3I6M6D21M1D25M1I8M21I20M7D36M6I22M6D30M1D13M2I21M11I29M6D21M1D7M6D17M16D28M11D10M6D7M4D76M1I39M2D71M2D20M3D25M1D14M12D27M2I27M1I28M5D42M1I26M12I5M2D33M3D8M2I40M5I18M5D6M2I12M3D20M4I22M13D7M29D13M5D11M4I5M6D14M8I40M11I21M3I16M2I27M2I12M12I23M14D26M5I17M8I64M11D13M8I4M1D12M2I21M24I7M11I17M1D7M17I19M2I20M5I9M12I8M1D16M4I21M23I28M6I19M3D16M6D93M6D60M10I165M1I49M4D15M3I39M6I20M4D13M4I15M 1361/2116 64.3% 2390/94230402 0.0% 487/2116 23.0% 112492022 77722533 +3835 chr4 + 190214555 144409768 144409767 144409919 152 TAATTTTTATTCATCAACTAAGTAAAAGGAAGAAAAGAAGAAGAGA-------------GAGAAGGAAGGGAAGGGAAGGAAGAAGGGAGGAAGGAAGGGAGGAAGGAAGGCAGGAAGGAAAGAGAAGGGAAGAAAGAAGGAAGAAAGGAGAA----------GGGAAGAAGGAA chr4 + 94230402 49044636 49044635 49044808 49044636 49044635 49044808 173 TAATATTGAATTACCTAAAAGATTAAAG--AGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAA ....x..x.x.:.:.x.xx.::.x....--.........x......-------------..:.::x...x::x.:....x.xx...x...:....:.:.::xx..:...:.x..:....x:.:.:.x.::.::......:...x:...x....----------:......:.... 28M2D16M13I94M10I12M 99/150 66.0% 173/94230402 0.0% 25/150 16.7% 95365132 NA +4404 chr4 + 190214555 144409902 144409901 144410026 125 GGAGAAGGGAAGAAGGAAGGAAGGAAGGATGGAAGGAAGGAAGGAAAAAAGAAGGGAAAGAGAA------GGGCGATAGGAAGGGATGATGGGAAG---AAGGGAATAATAAGTGAGGGG----GGAAAAACAAGAGG chr4 + 94230402 1500700 1500699 1500837 1500700 1500699 1500837 138 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagagg ..:....:......:.:x..::.....:.xx..:..:.:.:.........:x...:....:::.------...:....x..:....xx.x:.....---..x....x..x..:x..::.:----.....x.x...... 64M6I26M3I21M4I14M 88/125 70.4% 138/94230402 0.0% 13/125 10.4% 142909202 47305353 +4931 chr4 + 190214555 144449778 144449777 144449930 153 AGCCTTTATGG-TTAGGCGTGACTTCCTGAGGGATTTTCTCTGGATTCACAGAAGTTTCCCTGAATCCCAGGGAAAGC---CTGACTCACCCACAGTCCTGTCAGGGTGGGGCTGGTATAACTTGGATGCAGCTTCGACTTGGCTGAACTTACATGA chr4 + 94230402 31894239 31894238 31894389 31894239 31894238 31894389 151 AGCCCTTACGGCTTAGGTATGACTTCTTGAGGGATTTTCTCTGGATGAAAAGAAGAATTCCTAAA----ATAGAAGGCATACTGTCTCACATGCCATGCTTTCAGGGTGTGGCTG--CTTACTTGGAAACCTTCACTTCTCAGATTAACTCAGATGA ....:...:..-.....::.......:...................xx.x.....xx.:...:..----.x:...:..---...x.....x::.x:.x..x........x.....--x.x.......x:.xx::x.xx..::.x.x....:.x.... 11M1I53M4D9M3I34M2D40M 106/147 72.1% 151/94230402 0.0% 10/147 6.8% 112555539 77659016 +3022 chr4 + 190214555 144458487 144458486 144458534 48 TTCTTCTTTTCTTTTTTATTTGTTTGTTTGTTTGTTTGTTTTTATTTT chr4 + 94230402 55690035 55690034 55690082 55690035 55690034 55690082 48 TTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT ......:..xx......x........:..........xx....:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 88768452 NA +3037 chr4 + 190214555 144460062 144460061 144460097 36 TAGCAAGGGGATGGAAGTGGGCATCAGTGGCTGGTG chr4 + 94230402 92210278 92210277 92210313 92210278 92210277 92210313 36 TAGCATGGGGATGGAAGTGTGCATCAGTGGCTGGTG .....x.............x................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 52249784 NA +11297 chr4 + 190214555 144493737 144493736 144494621 885 AGCTATGACCTGGATGGAAAATGCCACAAACGATTAAAGCAAACTT---TAGTTTTTTGGCTGCCCCAGCATCTTCCCCTTTTTCTCCTGCTGAGGAGTTGGTTCACTGTGGTCTTGTTTGGAATATTCCATGAAGAATACTGACAATGTATGGGATTCGTCATGGTATGAACAATTTTCATGGATGGAAATACAAAGGCCAGTGTTAAATGAGAGCCTTTATAGAGGCTTTGAACAGTAATAAATTCCGATGAACAGTCCCCCACCCCTGGGGACCATCTTAATCTTTTTCAGGCACACACTAGATACCTTACAGAAGAAGCAGCAGTCCTCCAAGGGACAGAAGGAAAGAACAAAACCAACGGCCTTTCATTCAGGCTGAGAGACAAAATTCACTTCAATTTCAC---AAAACTGTCTTTGGACATGAACCAAATAAAAAATTCTTTTCATAGTTGGCCCAATGACATGCCACCTGAAATTACCAAGCTTGCTTTTCATGTTGTCTTTGTGTGCATGAGGGCAAGCTAGAGCAATAAACTGCTGGATATT---ATGATTTATTTTATAGTGTAACCCA-----------AAGCAACATGATCTCTGGTGTATAATAGAAGATAATATGACTCTTTGAAGCAGAGAGAAGAAAAGGGAGAATAAGCCCTGGTGGCATTAAAATTGAGGGCAAGTAATT--TGTCGCCGTAAGGGTTTCAAGTATTATAGTCCAT--GAAGGCCTTAAC-TCTGCTTGGAATGTGGTAAGGTGGCCAGG-----------CCTGTTGTGAAATACTTCTCTGGTAGAAGCTCTGAGCTGACAAGTTGTACAAAGAAGAGTTGCAAATTAGAAGCTTATTTCTTGTCAACATGTCAGGGGT--GGTCCTTAGTCTAATAATCTGAGGGAGACAG chr4 + 94230402 31901019 31901018 31901862 31901019 31901018 31901862 844 AGTTATGACCTGGTTTCAACATG--GCAAAAGATTAAAAGGGAGCTAGCCAAGATTTTGGCTGC-----------------------------------TGGTTCTCTGTGATCTCTCTCGGAATGCTGCATGAAAAACAGTTGCAACAGTTCTAACTTGTTACAGTATTAGTAATTTTCACGGGCTTTAGCACTAA----AGGGTTAAGTGGAAACCATTTTGGTGGCTTTGAACAGTCATAAATTCTGACAAAGTATATCTGACCCCTGCAGA----CTTAATCTTTTTCAGGCATGCACTGGATAACCTCCAGGAAGACCAGCACTCTGCTCAAATACTGGAAGAAGGGGGAAAAATTGTGG-ATGATAGTCTAGTTGAGAGACAAAACTCAC--CAACTTTCTTTGAAAAACACCTTTGTATGGAAACCAAACAGAAG--TATTTTAATCACTGGCTTGTCACAGTACCACGTAAAACGA---------ATTTCCACTTTCTGAGCTAATACATGAAA--AGGTTGTGATCAAGAATCACCTCACATTTGAGTGGGCAATTTGAAACTGTGCTCCATCAGAAGACGGAAATCACAGACTCT------TGTAACTGGGGAGGAAACAGATTCTTTTGGCAGAAAGAAGAAAA--AATGAAAAGGCTTTTCATTATTCAAA-TGCTTGTAAATAACTACTCTTATCTTAATGTGCTCAAATTATTTCTTCCCTCAGAAGCCCCAAATGTCACTTTCGAAATTAACACAGTAGCAAAGCTAACTCACTTCTTGTTGGAAAATA---CTCTATCAGAAACCTCAAGCTGACAG--TG---ACAGAAGCACTTTAAATTAGAAACTTACTGCTCATGCACAGTGGAGAGATTATGTACTAACTTAAAAAATCTG-GACAGACAG ..:..........x.xx..x...--:....x.......:x::.x:.---:.:xx..........-----------------------------------......x.....:...:x:.:.....::.x......:..:.x.x:...::xx.xx:.:.:..:.::....x.::........:..::xxx.::..x..----..x.....:..::.:..x..x.:.x.............x........:..::..xx:.x:.:x.......x:..----..................::....:....x.:.x...:.::.x.....x..:x.:x.::x..x.:.:...:.::x....x:x::..-x.xx:.x..x:.:............:....--...:..:x:---....x:::.....x.::x:.......:.:..:--.x....x..x::....:::x::xx:.:....x.:...:x.---------x...:..:x..x.xxx:xx:.:.....::--.:.:.:x:::x.x:..:::.:xx.:...---:..:x:x....x.x.x...:x:...-----------..::x...x:x...------.:...:x.::..x:.x.:::x.::..xx:.....:.........--:.x:.x...x.:.xx::x:...x...-..xxx.:..:...:.--.x.:::.x...x.xx:....:.xx.x.xx...x.--....x..:x..:-..xx:..x...xx.:::.x:..:..x.:.-----------.:.....x:.....---....:x:....:.::::........:--..---.x.....x::.x:.........:....:.x..::.xx...xxxx..:.:.--x..x..x.x.:x..x......-.:x...... 23M2D21M3I15M35D98M4D74M4D86M1D30M2D9M3I32M2D40M9D29M2D28M3I25M11I14M6D44M2D26M1D15M2I34M2I12M1I29M11I14M3D26M2D2M3D50M2I21M1D9M 495/806 61.4% 844/94230402 0.0% 117/806 14.5% 112592718 77621837 +3223 chr4 + 190214555 144496803 144496802 144496870 68 GAAATGAAATAGCTTTTCTAAGAGAGTTTTATTTTCTCAGCTTATAAAAAGAGACCAATAAGGAACTG chr4 + 94230402 20940230 20940229 20940297 20940230 20940229 20940297 68 GGAGGGAAATATTTTATCTAACAGAGTTTTATTTTCTTGTCTTATTAAAAGGGTTAAGAATGGAACTG .:.:x......x:..x.....x...............::x.....x.....:.x:x.:x.x....... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 123556573 66657982 +3098 chr4 + 190214555 144500990 144500989 144501040 51 TCTCAAAATAAATAAATAAAATAAATGAATAAATAAATAAATAAATAAATT chr4 + 94230402 37420841 37420840 37420891 37420841 37420840 37420891 51 TCTCAAAAGAAAAAAAAAAAACAAATGAACAAACAAATAAAGGAATGGATT ........x...x...x....:.......:...:.......x:...::... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 107080149 83134406 +12390 chr4 + 190214555 144505050 144505049 144505440 391 CTAAATGTCTCGGCTTTTACAGCCTAAACTGAGGCCGTTAGTGGCACTTGGA----------------AATTATTTTTGTGGTTTACTTTTATAGATAACACATTTCCCACCCCTACCCCCTTTCTG---CTGGCTCCTTAAGAAATTTGGTTGAGGGAAACCACACAGAATTCTGAAATCTGTAGGCCAGGTGCCCACATCACAGTGACTTGGATCCCCACGCTGGTGGCTTTTGGCAAGACATCAAAGTCTGTTCTTTCTCCTATTATCATTCCTAACAGGAAATTTGACTCCAGTGCATATATATAATATTTTCAGTAGCCTTAACTCATAACCCATTAATTACTTTTGGTTTTATTTATTGTGCTTCTGGTATTTCTCTTAAATTTAAAACTCTCCAAGAGTCTTT chr4 + 94230402 31904380 31904379 31904759 31904380 31904379 31904759 380 CTACAAGTATTATCATTCATGGGCTAA-TTGAGACTCTTAATGTTATTTGACTAGTTTTTCTGTGGTTGACTCTTTCCGTGGTTGACTTTTATGGATAGCACATTTCCC-------CTCCAGTTTTGGTCTTGGC------AGAAACTGGGTTGACTAAAACCACACAAAATTCCAAAATCAGTAGCCCAGGTACCCACATCAAAGTGTCAGGAATTATCATACTGGTGGGTTCTGGTCAGACCCCAAAGCCAGACCTTCTACACTTTATCATTCCTAACAGCAAATTTAAACC-----------TATTCTATCTTCAGTAGCTTGAAGTCAGCACTTGCTCATCATT-----TATTCTTTACAGTCCTTCCAGTATTTCTGTTAAATTTCAGGACCTCCTGGAGTCTTT ...x.x..x.::x.x..:.::.x....-:....:.:x...:..x:.:...:x----------------:.:.x...::......x........:....:..........-------.:..xx..:..---:....------.....:.x......xx:..........:.....::.....x....x......:.........x....x.xx.:..:x:..::.......x..:...:x....x:.....:.x.x:...::x.x:x................x......:.x:.-----------...xx...:.........:.x..x...xx..::::.x..:.:.-----.x..x....:x..x....::........x........x.::x:....x:........ 27M1D24M16I41M7D11M3I5M6D153M11D43M5D57M 256/361 70.9% 380/94230402 0.0% 49/361 13.6% 112600670 77613885 +26695 chr4 + 190214555 144509485 144509484 144510238 754 GTCATTTTCATAAGTCAGCAGGGGGTAGAGGCAGGAGGCAAATCCAGCACATCGTCAAAATAACCAAGTGTTCTGTGCCAAAAGGAAATGTGGGCTAAGAACTATAATGAGA------GGGTAAGCAAAGAGCCACTGGCTCCAAGCAGTGAGATGTGTCAGCGAGAGAGAACAGCAGTCCTGCTGGCCCGAGTTCAGGCCAGATCCTTAATCTGTAAATCACTGTGAAGCCCAATACGTCAAAAAAAAATGTGGCCACCCCTGGAGTAAAGGCAAAAGGCAACAGAG-------------TAACCTCCTGTGGATAACCCCTGTGAAAATGCAAAAACACCCCAGCATCCAAGAGAGGGGAAGGGT-GGCTTGCCAGAACCTAATTACATTTAATCAAGATGGCAAAAAATGATGAGCACGTGTCCCATAATCCCAAATGAAAAACACACGCATATGCGCGCGCGCACACACACACACACCACTCTTAAGAATGCTTGACTGTATATTCTCTCATCTCCCTTTATAAGCCTACTCTAAAA-TTTCTGGCA--CGGGCCTGA----AAGTCATTAGTAATTTAGCTGAAACGTAAAATTTTACTGCGGCGCATTGGTAGCTATTATGAGGTATAAATCTGTGTGGCTCTGGCAGGTTGAATTCCCTCCTACTACCCTTCATCGTGCTACAGAAAGCATTTAACCGTGCTGGGGGGGGTACAGGACTCACATTTTGGAATTAAATTAGAGACATGAGAATACTAAAATACCCTTTCTTTTCT chr4 + 94230402 31906939 31906938 31907648 31906939 31906938 31907648 710 GTCATTTTCATGAGTTACTTGAG---ACAGATAGGAGTGGAGTCTTGCACAAAGCAGAAATAAAAGAGTGTTTTGTGCCAAAAGGAAATGTGGGATAAGAACTATAATAAGACTGAAAGGGTAAGCAAAGAGTTTGCGGCTTAAAGCAGTGCAATGTGTCAGAAAGAGAGAACAGCAGCCTTGCTGGCACTGTTGCAGACCAGAGCCTTAATCTGTAAATCACTGTGCAG-CCAACACGTC--AAAAAAGTTTGGCCACCCCTGGTGTACAGGCATCAAGCAACAAAATAACATACTGTGCTAACCTCCAGCGGATAACCCAGGCAAGCATGC-AAAACACCCCGCCGTCCAAGAAGGATAAAAAGTAAAATTGCCAAAGTCCAATTACTTTTAATCAAGA-GGCCGCAAGTGATGAGAGCATGTCCTATAATCTTAAAGGAAAAA-----------------------------------AAGTCTCAAGAACAGTAGTCTGTAAATTTCTTCATCTCCATTTGGGAGAGCACTCTAGAACTTTTTGGCAGTAAGACGTGAAGTCAAGTCAGTAGTAATTTAACTGAAATGTTAAATGTTGCTGCCAAGCATTGGTAGCTTTTTCAAGGTATAAATCCAGTTTGCTCTGGAAGTCTGAACTGCTACCTTCTTCT--------------------CATTCAGTCACTCCAGAGAGG--------TTCAGATTTTTAACTAAAACTAGAGATTTGCAAACATTAAGAATTGTTTTCTCCACT ...........:...:.x:x.:.---.x..::.....xx:.:..:x.....xx.:x:......xx:......:.....................x.............:...------..............::xx:....:x........x:.........x:..............:.:.......x.x:x.x...:.....x......................x..-....:.....--......:.x.............x...x.....xx.:......:.:-------------........x.:.........xx.::.:x....-..........:x.:.......::.:x:..::..-::x......:.::.:......x...........-...x:x..:.......x:.:.....:......::...x......-----------------------------------x.x...:.....::x.x.x.....x...:::........x...:x:..xx:......:..-...:.....--x:.:.x...----......x..........:......:..x....x..:....x:x............x..x::...........::xx.x.......x..x:....:.x.:x...x..x.:--------------------....:.::.::x.::.:.:..--------:...x.....x:.x.x...:......:x..x:..:.:...:.xx:x:.....::x.. 23M3D86M6I112M1D10M2D45M13I32M1D33M1I33M1D44M35D60M1I9M2I9M4I109M20D21M8D57M 504/683 73.8% 710/94230402 0.0% 98/683 14.3% 112602546 77612009 +21028 chr4 + 190214555 144529762 144529761 144530331 570 AAAGGTCATTTCATTTCGACTGAAA-AGCTGAATTGTAAAAATTATAGTTGGCAAAGTGATATCTACTCAATCAAAATAAAACATAAAATGATCCTTACTAGGCCAAAAGCAGCTGTCCAATCATAATAAACAAAATTCCTCAGCTGATGTCTTTTTCTGGACCCATGTTTTCTTCGCCTTTTATTTTTTCCTCAAAAAATTAAATGGAAAGACCCAGGGATAGGGGTAAAGAAAGAACGACATTTGGGCCCGGTTCTTATGCATGTGTTGGATTATCTGAGACACACAGATAAAACTGGATGTAAGCCTTAAAATACAGCAGAGTGTCAATTTCAAAATAAATAACGATAATGGTATTTTCAAGATCAGGTCT----------TTATTCATGCTCTGTGCCAAAGCATTTA-AATACCCTGTGCTACTCATAACATAATGTGGGTGGTAAAAGAAAAAAAGCCAGCCCTCCTTCGACATGTTATTCCTAAAGAGTCTAT------TCGTGTCAGTGCTGCTAAGATACAATTAATTTATATAACCCCAATATCCCAATGCTTAAATACAAGCACATGAAGCAAAACA chr4 + 94230402 31920252 31920251 31920802 31920252 31920251 31920802 551 AAAGGTCACCTATTTTCAACTGCAATAGCAGCACTGTACAAATTATGGTTGGCAGACTGGTATCTCCTCAATCAAAATAAAACATTAAGTGATCCTTAGTGGACCAAATGCAGCTGTCCAGTCATAATAAACAAAATTCCTCAGTTGATTTCTTTTTCTCAACCTATGTTTTCTTCACCTTTTCC-----------AAAATTAAATGGATATA-------ACAGAGGTGAAGGAACA--GACATTTAAGGCTGA--ATTGTGCATGTGTTGGACTATCTGAGATAAACAGATAAATCTGGGTGGTAGCCTGAGAATCGAGCAGTGGG--AATTTCAAAATAAATAAC------TGTATTTTCAGAATAAACTTTATTTTTTTTATTTTTCATGTTCAGTACCAGAACATTCAGAGCGCCCTGTTGTGCTCATAACATAAGGCAAGTGGC-----GAAAAGAATCAGCTCTACAGATATCTGTCATTTCTAGACAAGCCGTTTAATATCATTTGAGAGCATGGAAAGCAAAAGTAACATAATTAACCTCAATGCTACTATAATGCAAAGC-AGCACA-AAAGCAAGGCA ........::.xx....:....x..-...x.x.:....x.......:.......:.x..:.....x...................x..:.........x.:.:.....x...........:.......................:....x.........x:...:...........:......x:-----------.............x.x.-------.:..:...:...:..x.--.......::.x.:.:--x..:.............:.........:.x.........x....:..xx.....x.:...xx.....x.x.--..................------x.........::..x.:x.:.----------..x......:..x..:...:.:....:.-.:::......xx.:............x.:::....:-----:....:.::....:..x.xxxx.:x...:...:...:.x.:x.::.------..:.x.x..x..xxxx..:::.x..x...:x..xx.....:....:::x.x..:x.xx..x:.-......-:......::.. 25M1I159M11D17M7D17M2D15M2D71M2D18M6D21M10I28M1I36M5D46M6I63M1D6M1D11M 399/533 74.9% 551/94230402 0.0% 55/533 10.3% 112609510 77605045 +3453 chr4 + 190214555 144542291 144542290 144542362 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x::...........:.:x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 68509085 NA +3118 chr4 + 190214555 144570658 144570657 144570710 53 AAAGATGATTCCAAACAGAAAAAAAAAAAAAAAAAAAAAGAATGTGAAAGCGT chr4 + 94230402 4339988 4339987 4340040 4339988 4339987 4340040 53 AAGGATACTTTCCACCAAAAAAAAAAAAAAAGAACAAAAGAATGTCAAAGCAT ..:...:x..:.x.x..:.............:..x..........x.....:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 140230670 49983885 +10050 chr4 + 190214555 144575354 144575353 144575717 364 AGTCATTATGAAAGTGAGGCTGGA-GCCCAGGAGGGAGGAACAGATTGCATTGCCCATGAGCATGACCTAGTGGCTGGTTCACTGAGTGGCATTTATGGCAGTAATAGAAAAGGCTGCTTGTCTGTTTTCCAAGTGTCAGGGTAAGTGATGTGTATGCAGCTGTTGTTCATGGAGATGTGAAGAGCAGGAAAGAACAGCATCTTAGAAAGCGT-AAGTTAAAAAAGACATTCTTAACCTCCAAATATTAAACATTTGGTACTCTCTACTGACTTCAGGGACCTGGACCCATCAAAAGCACTTGTTTGCAGAGGCAAACAGAATGTTCTTACTGATTCTTCACAAGGAACCAAAAATGATAAACTTT chr4 + 94230402 31925076 31925075 31925410 31925076 31925075 31925410 335 AGTCACACTAGGGGTGATGATAAATGTTTGGGAGGGAAAAA-AGATTCCACTGCACTTGAGCATGACCTAGTGGCTGGTTCATTGAGTGGCATTTATGGCAGATACGGAAAAGACTG---GTCTGCTCTCCAAGCATCAACTTAACTAATGTGTATTCAGC---TGTTCATGGAGGATTAGATAAAGGGAAAGGCCTGGA----ATGAGGTGTGGAGATGAAAGACCCACACT---CCCACAGAAATTAACCAATTGGGACTCAC-----ATGCCTGGTACTTGGACCCACCAAATACACTCTATTTTGTAACCAAACAAAG----CACACAGATTT--------GCACCAAGGATAAAAACCTTT .....:xx.::::....x.x.::.-.::::.......::..-.....x..:...x.x.........................:...................xx.::......:...---.....:.:......::...:xx...x.:........x....---...........:xx.::.x.:x:......:x.x.x.----.x:.:.:..-:..x.:...:.xx..:x..---..:x..:.x.....x..x....x....x.-----.:x:.x..x..:........:....x:....:xx..x::x.:x......:.:----.x:..x....:--------.x.....::..:.x..x.... 24M1I16M1D75M3D41M3D36M4D9M1I19M3D29M5D52M4D11M8D21M 233/333 70.0% 335/94230402 0.0% 33/333 9.9% 112650278 77564277 +3516 chr4 + 190214555 144594106 144594105 144594177 72 GTGTACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGCACAGGTTGT chr4 + 94230402 76033204 76033203 76033275 76033204 76033203 76033275 72 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ...:..x..................::........x:xx.x.:.x.......:..::.:..x:x::..:... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 68560902 NA +3017 chr4 + 190214555 144601562 144601561 144601617 56 AAAAAAAAAAAAAAAAAAAGAATATTCCACAGACATTTTTATACTTAAAAGTGGAA chr4 + 94230402 64570966 64570965 64571021 64570966 64570965 64571021 56 AAAGAAAAAAAAAAAAAAACAACATCACATTGACACTTTGGTAGTTAAATGTAGAA ...:...............x..:..:x..:x....:...x:..x.....x..:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 80030596 NA +10413 chr4 + 190214555 144645828 144645827 144646257 430 CTGCCCCAAGCCCGCCGG-GAACCCGGGCCGTGGACGCCCCCACCCGGGGGCCGCGGCGAGGCGGGCGC-GCGGGGTTCAGCACCCTCGAGGCTGGTTCCGAAGGCTCGCGGCCCTCCCCCTCCGTCCGC-CGCCGTCGCGGCTAGC------CGCCCCTCCCCGCCGC-AGCAGGGAGGCCGCCGGGGCCCGGGGGACGCGCTCGCGCGGGG-GCCGCCCCCTCCCCTTCCCTCCACCCTGGGCGGG-GGCGCGCGAGAAGCGGTGACGTCAAG---------GGGCGCGCTGTGGCAGCACCTCCCCGCGCGCTAGTTAAAAAGAAGAAGAAAAGAGGGAACGAAACATGAGAGGCTGTGTGAGAAGCTGCAGCCGCCGGCAGAGGAGACCTCAGCATCATCTAGAGCCCAGCGCTGGCCCTGCCTCCGCCTGCCCCGCCGCCGCCGTC chr4 + 94230402 31968798 31968797 31969197 31968798 31968797 31969197 400 CTGCCGCGGCCCCGAGGGCGAAAGCGGAGCGGCGAC--CCGGAGCCGACGGCCGCCGCCGGGCGACCGTTACGGGGCGCGACGCCGCCG------------------CGCGCCCCTCTCTCTCTCCTCAcgcgcccccgcggctcgcgccgagcgcggccccgcgccgctcgcacgcgggccg-----------ggggcgaggccgggcgcggcgccgcttcccgccgggcccccgcggcggcgcgggaggcgcgcgcggc-cggtgccgccgggTGACGTGCAGGGCGCGCGGTGGCAGCACCTCCCCGCGCGCGGCTTAAAAAGAAGAAGAAAAGAGGGAGCGAAACATGAGAGCCCTAGTGAGCCGCAGCCGCCGCCGGCAGCGGAGG---GGGCATC-------GCCCGGCCCGG---------CTGACGGCGCCGCCGCCGTCGTC .....x.::x....xx..-...xx...:x..xx...--..xx.x...:x......x..x:....:x..:-:.....:x.::.:..x:..------------------....x.....:.:...:x::.:.-....x:.......x..------...xx.:..x......-x...x.x:.....-----------...:..x.x:..x...x..-.....::..:x..xxx...:.xxxx.x.x.....-........x.:x-.....x..:.::.---------........x......................x:x........................:.............x.:xx.....xx..x..x...........x....:---x:.....-------....:..x.x.---------.:.x.x..x.........:.... 18M1I17M2D31M1I19M18D23M1I16M6I16M1I13M11D19M1I34M1I12M1D13M9I107M3D7M7D11M9D23M 277/379 73.1% 400/94230402 0.0% 72/379 19.0% 112677030 77537525 +97198 chr4 + 190214555 144646718 144646717 144651024 4307 GCTCTGGGCTTCTTTGAAGGAGATGCTAAGTTTGGGGAAAGAAACGAAGGGAGCGGAGCAAGGAGGAGAAGGTGCCTGAATGGGAACCCCCCGAAGCGCCTGAAAAGGAGAGACAGGAGGATGATGTCCCAGCTGGAGCTGCTGAGTGGGGGAGAGATGCTGTGCGGTGGCTTCTACCCTCGGCTGTCCTGCTGCCTGCGGAGTGACAGCCCGGGGCTAGGGCGCCTGGAGAATAAGGTAGGCACTCACCGGCT-------TCACGGATGCGTACTTGGCATATTGGCTGGGTGGGGT---------TCCCTGTGGCTCTGGCAAAGCCGGTGGTTGTAAGAAGGTCAAAACTTCTTTGGGGGAGTTCTTTCCATAACTTTTCTATAGCGCTAACGTGATTCCGTTGTGTGTTCCTCTGGGGTAAGCAAGTAGCATTTCCTCCCCCAGAGTCCGCGGTCGGGA----TGCTGTGCAAACTTGCCTATCTCTGAAAACAGACGTTTCTGCGGTACCCGCACCCTGGGCTGGGTAAATATTTTAAAAGAATCGCGATGAACAGTGTGTTTTGGAT-CGAATGGGGCATTGGCTGCGGTGAAACTGTAAATTAAGGTGGCTGTGGTTTCCGGCTTATTTTTCTAGGGTAAAAAGA--TTTGTGCTGTTTT-CTCCACGTGCTCGGTTAGGGAGAGGATTGAATCGTAAAGGATGTTGAAGCATGGTTGGTTTATGATCCCCAGCCCCGTCAGAGGGGGGTGTCTTGCATTACATTAGTTAA-----ACCAACAGAAAGGAACTCCTGGTCCTCCGGTTAGGGACCTGAAAAAAACTGGCGAAAGATTTTGCTGGGGCGTTATTTATCACATAAAACT----GAGACGATTCTCCGTCATTTTGTAACATTATAAATTCAGACTTTCAGGGTCAGTTGGTGTCTTGGAAGATCTACTCTAAGA-ATTTGTTTTAAGAGTAATGGCATTTACGTTATCCTTGTGTTAATAAGTTTAAATACTAACATGGTGTTTGTTGACTGTAAAGGCACGCTTGTTTTTGAGTTTGCAATATCGTTCTTGCCAGGAGATGCAGTCATGGGTGGTATCTACTGTACTCCAAGGAATCATTGCTGGCTCACATCATTAACAATCACTGCACGTGAAATAAACAATCAGGTG--------------------------------------TCTTTGCTCCCCCTCCCTTTCCCCATTTTAGGTTTAATTAAGAATTCCTCTGTTAGAACACTGCCAGTTGTCAAGGTCTGAGAGACTCTTGGAAAACTTGTGCTTCAGTCTTGCTGGCCCAGGCATAATAAAAAAAAAAAATACCCAGGCTGAATCTAATTTTTATGCTCAGTTCACGGTAGATTTCACTCTATTCTCATGTAAACAGCTCCTACGAATCAACATATGTGTCTGGGTGGTATCTCTCACTTTGTTTTGTAACAAAAAGCCATATTGCATCATTTAATTTGCTCAAGTCATGCAAATAGGAAAAAATCAATAGGACAAAAAGGGGTCGACTTATCCTCCTCCCCACTAAACTGCTGCCCACACACAGAGTCCTGTTGCTTATGGCAAAAGAATAACAACAACACCATTGTATTTGTTAGTTGGTTCACTAATGGGTGAAACTAGAGAACATCATTCTCTTTCAGTCCCCAGCTCTGTCCAAATGTTCATGCCTTTTGAGGGAGCATTTGTCCAACTCCTTCTATTCCCAGATGAGTGAGAACTGTCTTGCTGCAGGTTTTCAGCTGCAACTCTCTTTTTATTCTTACCATATGCAGCAGGAGCCTGAGATTCAGGGAACAGATATTCCAGGATTTTATTCAAAG-CAATGTCTTTAAGCTCCTGTGTTGCAACTGAATTAAGTTTCAAAATAGCTATATTCAGGTCACCTTAAAGGTTTTATCAGGAGCCCTAAAGAACCAGGAAATTCAGAGAA-AAGTTTAGAAATATTTGCCATTAAGTCTCC----------------CTTGGTGCAATACGTACTATGAATAT-ACTGATGATCTAGAGACCCCTGCAATACTCAACTCTTCCAGAGACATGTGGAATGAAAATTTTGTTCTTGACTAAATGGTGAGGAGAAGGGGAAGGGGGATGGGACCAAGGGGAGTTATAGCCCTTAAGAGAAGTTATATAAAAATTTTTTTAAAGAAATCATTCTTTAGGAAGCAATCTGCCATGTTAACTATATACATTCCTTTCTGTTTTA-TGTGCTTCCAATCTCCAACAAACCCCTACTCATTTGGAAAGTGTGTC-TGAATTAAGTTTGGTACACTAGACTTTTGCTGGTTCTATTACAAGAGGTTTATAAATCAACAATACCCAAATTGTTCAAAACAGAGATTTGCTATAGCTATGCATATGCATTCTTGACCTATGTTAGTTTTCAAG--------TTTTAATAGTTTTTAAAA-CATGTTATTTTATAATAAACTTCAGTGTTTCCCTTTTTCCCGTAAGCCTTCCTGGATTATAATATATGTTAGGATCTTATTTCATAATGTG-----TATA------CAGGAGAGATGATTGCTATTTGAAAG----GGCCCTTTTTTGTTTATGGAAGAAA---AAAAAAAATTCCCCAG---AAAGAT----TTCTGCAGCTTTTCAAGAAACTACAGT-------AGTAGCTTTTTCCTACAGGAAGAAATTTCTTAGACA--AATAGATAGTAGCAAACTAG-----------GTAGGAATATTAGCATGCTCAGCTATGCAATTAAGTCCT----GTTTCTAGGCTAAGAAATTTTTTTAATGAA-------CTAGAATTG-AGTTCAATTCT------TTAGCCATGGAATTATGCTCTATT---TTAATTTTTTGTA-------------TATTTTAATAATGTTGTATA------------TTGTAATAAGATTGTTAACTACCATGACAAATAAGTACTGTCAAAATTTAGGAAGTCATATTATCTTAGCAATATTTTCGCACTTTCTAAATACAGCATGCTAAAAGGATCTAATTCTTATTAACCAAACTGAATCTGCAACCAACTGAAATACCCTCATTTCTAAAACTTAACTTGTAGCCACAGAGGCATAGAAGCTCTCTCTACCTTGGGTGGTTTCACAGCCAAAGCTGTCAAGGAATGGGTGAAAAGTAATTGTTTTCAAGTGTGCCCTTTTACAATCATTTGTTTGCTCTGGCTCTTTCAGGGACAAAGGCTATTGTTGAACACATCCAACTAAACAAATAACTCATCCTGGGGTCCCTTTAACAGCTGCCTTAGTACAATGATCTATTTACATATTAGCCTAAAATTGAAACTGAACTCTTTAATGACATAATCCAGCACTATAGTTCAG-AGACACATGTGTTCTATCCAACAGCTGAACAACCTTGTAGGCATATGATTTTTAGAAATAACTTTTTGTGTACCAAGTG-ATCTTAAGGCGACATCTTAATATACTGTCATGTATTTTCTCCTTTTGTCCCCT--CATCGAACCCATGTGGCTGCCTTTTGCCCT--CTTTGTTTAGTTACTTGGTAAATAAAG-AGA-----------AATACAGAAGGTCTCTGTCACC----------------------------CATTTTACTATTTGTTGATAAGCTATAGTTGGAGGCCACACTTTACTGTGTA-TCCCCTATTTATCTTACCCTTCTTCTATGGATTTTATTTTCGTGTGGCTAAAGATTAAAGGATGACCTGCCAGATGTTATAAATT----AGCAACAGCCACAATGATTACTAGGCATGCTGTAAT-AATGTTTCGAAGTTTTACGTGATTTCTGAAGTATATTTAGTTTAAACCACTG-----TGATGGTTTTGTATACGGCTTTTAAAAATTGAAACAGGAAATTAGCTTAAATTTCTTCTTAAGATTGACGGCATCATCAGAAATAAAGTTAAGGACCTATATAAGACACAGACACATAGGCAAAAAAGAGGAAGAAATTACCCTACACACACCCAGACTCATCTGTCTAAAACACTGTTGCAGCTTTGGCT--GAGTCAGTTTAATTGACTTCAGTAAGA-----CTATTGGTTCATTGAAACCAAAGCCAGAATGATGGCTCTATCTATCTTCAAATAGGTATTTACACTGCAGACCTCACACAGAGCAAAAATGTTACCATCCTGCTGGGCCGGAACAGCATGAAACTTTAAAAAGAATAATATTATACTTGA-TTTCAGATAATTTATTGAATCCTACTTCTGAAATGTTTGATGAGAGATC-TGTGACCAGAACACATTCCAAAAAT--TGTAAAAGACAAAATTCCTTAGGCACTAAAATCAAGCTCTTCCTGGATAGCAGCTGAGAGAGTATATGAGGATCATTTTGTTTTCAGCTATAAAAAATGGAAGAATG----------CATAATCTCCATAA--AACCAAAGGTAATTACATTCCAGTTTTTCAGCCAGCAAAAG--AGGTGCCTTCAGCATCCTGCAGTTGTTTTGTTCTT chr4 + 94230402 31969824 31969823 31973887 31969824 31969823 31973887 4064 GCTCTGTGCTTCTTCGAGGGGGATGCCAAGTTCGGGGA------------GAGCGGCGCGCGGAGGAGAAGGTGCCTCAACGGGACCCCGCCGCGGCGGCTGAAGAAGCGCGACCGGCGGCTGCTGTCCC---CGGAGGCGCCGGGCGGCGCGGAGGCGATGTGCCGCGGCCTCTACCCGCGCCTCTCCTGCTGCTCCCGCGCCGACGCGCAGGGGCTGCTGCACGCCGGGGCCAAGGTAGGCAc-cgccggcggcgggcgccgcggccgcTTCTGTTgcgcggggacgcgggacggcggcagcccgcccccggagctgctccggcgccggggg--------aacgcgcgccgcccgcggggga----------cgggcgctcggcgggtacggcgcgggtccgtcccgcgcgcgtcgcgtgggagcg---------------ccggggggccgccgccggggccggTGCGGAGGGACCGTGCCGCCCGCAGGTAGCGG--------------------CCCCGGGAAGGT-----------GGAGGAGCGGGACGGGC-------TCTGGCTGCCGTCCGGGCGCTGGCAGCGTCGGGACCGTAAATGAGCCCGGCGGTGGTTTCCGGTTTATTTTTCTGGAGTAACAAAAACCTCGTCCAATTTTTCTCCGCGCTTTTAGTCAGGAAGGGTTTGGGATAGCGGACGGCGTCGGCGTACCCAAACTTTACGATCTTCGCAGCCCTC-------GGGGCCCCGCGCTGCCCGCGATGACGCGCGTCAGCCGCAAAGCCCAcccgcggccgtggc--agcgcccggcgcgcaccgcc---cgccccggccggg--------------------ctccgggggACGA----------------------ACGGGCGCAG---CTCTGAgcccggcggcgcggcggggg--ctgcggggaggcgcccgctcagcgcgcggctgcg-----ggcgccctca----------------------------gcccgccgcccg------cccgccTGTTGCTGAGCCC-----------------------------CGCGGGCGG-----GCGGCACCCGGCAG----------------TGTCATTAGGAAGCGCTGCACGTGAAATAAGCCATCAGGTGGCtttttttttttggtctttttttttttttttggtctttttttttttCCCCCCCTCCATCCTGGTTTAGGTTTAATTAAGAATTCCTCCGTTACAACTCTGT-AGTTGTCAGGGTCTGAGAGACTCGAGGAAAAGTTGTGTCCCAGTCTCGCTGGCCCAAGCATAATAAAAAAGAAA--TACCCGGCCTGAATCGAATTTTTATGCTCAGTTCACGGTAGATTTCACTCCATTCTCATGTAAACAGCTTCTACGAATCAACATATGTGTCTGGGTGGTATCTCTCACTTTGTTTTGTAACAAAAAGCCATATTGCATCATTTAATTTGCTCAAGTCATGCAAATAGGAAAAAATCAATAGGACAAAAAGGGGTCGACTTATCCTCCTCCCCACTAAACTGCTGCCCACACACAGAGTCCTGTTGCTTATGGCAAAAGAATAACAACAACACCATTGTGTTTGTTAGTTGGTTCACTAATGGGTGAAACTGGAGAACATCATTCTCCTTCAGTCCCCAGCTCTGTCCAAATGTTCATGCCTTTTGAGGGAGCATTTGTCCTACCCCCTCTATTCCCAGATGAGTGAGAACTGTCTTACTGCAGGTTTTCAGCTGCAGATCTCTCTTTATTCATACCATATGCAGCAGCAGTTTGAGATTCAAGGCAGATAGATTTCTTCACGTCGTCTAGAGACAGTGTCATTAAGCCCCTGTGTGATAATTGAATTAAACTATAAGCTAACCACACACGGATAACCTGAAAGATCTAGCTGGGAA-----------AAGGAAAAAAAGAGAATAAGGACTGGAAAATATGTCCTTAATTCACCCTCCTGTTTGTAGTGGCTCTGTGGCATATATGCTACTGAGATCATCCAGCGCTTGGAGACTCTTGCACCAGTTGGCTC-----AAGGCA-GTAAGCTGGAAGTTGTGT--TTCAGTAACTTTTCA-------------------------------ATCTTCAGCCACTTGAAGGGTTTAT-------TCTCTTCTTAGAATTACTT------GAAAACATCTTC-----TAAC--------TCCCCTTGGATTCCATTGGACTAACAGTACTCAAA--------ACTTCATAGAAATGTGCGGCATTGACCATATATGCCACACTAG-------------CTATT-------------------------CCTGAGCTGTC--------AGATCTGttttttttaaatata----------aattatGC---TTTTTAAGGAATATAATTTTAAAGGATTTTAAAATCAGACTATTTTCCATC--ACATCAGCTTTTCTGAACCTCTCAGATCTGCTCCATCATATCAGTGCATGTTTAGGAAAAATGTCAAAATATGTCATTTATACTTCACCGAATGAGATGGTCTTTCCATAAAAGACATGGCAAACT----GTTATGGAGCACATTCGAATAAAACTTTTCAACTTCAAAATTCTATTCTATGACAGTCCAAAAAA--ACAGCCTGTTTAAATGTTACTCTCCATCATCTATCTATGGCTATGACATTAGCAGAAAGCTGAGCACCAGCTTCTTTAAAAGCAAAGAGTTGAGCATGCTCAG-TAGACGTTT---TCATGAGAGCTTCTTGGTTAAGACGCTGTCTTTGAGACAAGTCTTTGAGAATTGTTGATCAAATCTGTGAAATTTGTAATGAAAATG-GCACCAATGGCTGCGGTTTTGGGAGCAGAAACGGAGCTACCCTAATAACCATACACAGCACTGCACTGCCTCAAGTATGATTTTTACATACAGT-------------TGTTGACATTTAA-----CTCATCGTCTT--CCAGTTTTCTGCGCTATCCCTTTGT------TTATGAAGGACTACTATATCCCAGTCAAAT--------------ATTGTCATACCACTTTTTCTGAACGTTTGCTTATAGCCCAACAGGCGAGGAAGTCCTCTCTACCTCAGTTGGCTTCACAGCCAAAGCTGTCAAGGAAAGGGTGAAAAGTAATTGTTTTCAAGTGTGCCCTTTTACAATCATTTGTTTGCTCTGGCTCTTTCACGAACAAAGGCTATTGTTGAACACATCCAACTAAACAAATAACTCATCTCGGAGTCCCTTTAACAGCTGCCTTAGTACAATGATCTATTTACATATTGCCCTAAAATTGAAACCGAACTCTTTAATGACATAATCCAGTTCTATAGTACAGAAGAAGCATATGTTCAACTCAACAGCTGAACAATCTCGTAAGCATATGATTTTTAGACATAAATGCTTGTATATCAAACACAGCGTAGTGCAATGACTTATTTCACTG---CGGGTTGGGTTTTTTTTTCCATTAGCATCAAAACGACGT---TGCCTTTCATTCTAGATATGACCAG------GGTACACAAAACAGATGACTATATTCAACGTAAAGAATTCCTGTCTGCTGTGCCTTCCTCTGGTTCTTCTTCTTTGCACTATACTTTCTGTTGATAAACCAATGTTGTATGCTATGCTTTCCTCAGCACTCCAGGATTTATCTTACCTTTAGTCTTTGTGTTGTACTTTCATGTGGCAAGAGATTAAAGGATGATCTTACAGATGTTGTAAATTATTCAGCAGCAGGCATAATCATTATTAGGCATGTTGCAATAAATGTTTGGAAGTTTTACATATTTTCCAGAGCACAGTTAGTTTAAACCACTGAAGTTTGATGATTTCACACATGAC-TTTAAAAATTGAAGCAGGAAATTAGTTTACATTTCTTCAAAAGACCAAAGCCATTGTCAACCGTAAGGT-------------------------CATTTGCAAAGTGGAGAACCA-----------ACAGAAGAAGGTTCATTCAGATAAG----TATTGCAGCTTTCACTTAAAACCGATCTAATATACTCCAGGATAAATACGTTATCGATTTACTGAGATTCAGAATAGAATGGTTGTCCTATCTCCCAGCCAGTAGAGAGTTATACATCAGACCTCACACAGAGC--AAACGTTACCACCCGATTTTGCTTTAGC---------CTTCTAAAAGTTAAATAACATACTTGATTTTCAGATAACTGATTGACTCTGATTCCTTAATCTTCCGATTAGCTATTATATGACCAAGATTCATTCCAGAAATGACATGAGGGGGTGAATTCCTGTGG--TTAA----------TTCCTGGATAGCAGCTGCTCAGGGGGATTAGGATCCTTTTGTCTT-AATTCTGAGGACTGAAATATTGGCAAGCATTTCTTCTTCTGTATCACCAGGCAACGTCAATTACA-------TTTTCCACAAGAAACAGTAAATTAGCTTTGATATCCTGCAGtttctttttttct 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38M12D80M3D112M1D8M7I37M9I27M8D22M10D54M15D20M4I32M20D12M11D17M7D7M1I78M2I13M1I79M7D24M5I31M2D20M3D13M20D2M4I7M22D10M3D26M2D11M1I22M5D10M28D12M6D19M29D9M5D14M16D41M38I64M1D74M2D512M1I83M11D16M1I30M16I26M1I35M5D6M1D18M2D15M31D25M7D19M6D12M5D4M8D15M1I19M8D20M1I22M13D5M25D11M8D22M10D8M3D8M8I18M1I16M2D73M5I4M6I26M4I8M4D13M3I16M3I6M4I20M2D5M7I36M2I20M11I22M1D9M3D4M4I30M7I9M1I11M6I15M1D8M3I13M13I20M12I25M13D13M5D11M2D25M6D30M14D313M1I79M1I27M3D23M2I14M3D13M2I10M6D11M1I3M11I22M28I52M1I85M4I36M1I52M5I19M1D69M25D21M11D25M4D16M2I27M5I84M2D28M9D27M1I49M1I25M2I23M2D4M10D45M1D22M10I14M2I17M7D17M2I35M 2626/3789 69.3% 4064/94230402 0.0% 793/3789 20.9% 112676894 77537661 +33740 chr4 + 190214555 144652580 144652579 144654574 1995 TTTGCTTCTGATTTATGGCTTTCAGATATTTTCTGTTACCAACAACACAGAATGTGGGAAGTTACTGGAGGAAATCAAATGTGCACTTTGCTCTCCACATTCTCAAAGCCTGTTCCACTCACCTGAGA---GAGAAGTCTTGGAAAGAGACCTAGTACTTCCTCTGCTCTGCAAAGACTATTGCAAAGAATTCTTTTACACTTGCCGAGGCCATATTCCAGGTAAGAAAAAAAAATGCATAAGTAAAATAAACCACTGCACAATATCC-TTGTAAGATACTTGTA---CTTAAATGCTTATTTACAAAACTT--------GTAAAATT-----------------TATCTTGCCTTTAAA---AATACCT----------------ATTTTACCTCAT------AATTAACATTTCCAAATTTATAACTTTTACTGCCTCTAAA-----GGGAATATTGTAATTTCAGTCTGCAAACATTATAATTGGTTTTGTTGACTTGT-TATATATT----TCTTGTTA------AGCTGGTAAT---AACAGCT-TAACAGATTACAGGTGGTAATCTTTACACA--------------CGTTGGATTCTCAATC--CAAACTC------CTCGTTGGTGCCTTCTTTACCATAACATCAGCTTCAATATCAAGGCAGTGTCTTCTTCTACATAGCTGATACATATATATATTGGAGAAAGTCCACTGACTTGTAAGATA-----GATCCTTAAA-------CAAAATATGATTAGGAATCCAAAAAGTAATATCTTACAAAGCACTTTCACA-TAAAATGACTAATTTTCTCCTCAAAAACCCTGTAAGCTAGGTAGGAAGAGTGGAGTCCTCTCCAATTGGCAGATGAGGAAATCTGAGC-----CTTGGGAGAAGTCAAACACCTTAATCAAAGTTATACAATGAGAAGGTGATAGGAGAGATATGGAATTTCTTATGCA-TATAGTGTCATG-AACATGCCTAGT---CACTATTGTAGTTTGGACTCCAATAAGCTTATATATTCATTGAT-TAATTTTTA-------------------------------TCATCAAAAAT----------------------------TTGTAAATTTTGGTTGCTGTTGCTTTAGTTGGAA----GACTCAACATAGAGGAAGAAAAT-AATTTAACAAGACATTCTGTTTAGT---TGGGCAAAGTCGCACACAAATCTACTGAAGATTAAGCAGTATTTAAGGAAAAAACAAGCTTTAAGAACCGTAGAATGCACCAAGAGAATTTTTTTAAGTGC-TATGTACATTTT--ACTT-TTTTCTCTGA---CCCAGGAAAGTGTAGACTTTTGTATTTTTAATATAGCTCTCTTAATAACCTTATAGAACATTTTGACTAGGGTTGCTTG--CTCCTTTGCATCTAGCATAACATATATCTAAACCCATTCAA-TATGAAAATATTATTATTGTCTTCATAAACCACAGCCATGTTTCTAAGCCTTTTCTCAAGCAGCTGTTTCTTCCTCTTTATCACATTCCCCAAAGCAAAGTAGAATAGGTCACGGTTGCCTAGATGGCCTACAAAGAAGTGATAACAGATTAGATACCATAAATGTTTG-----CTGGAAACTTCAAGTCTTGAACATTTGCCTTTAGGACTATAAATTGAAAGTGATATCAACACTTAGCATTTTTA-------------TTTACCATTATCTACTTTAGATAACTACAACATGCTAGATTT--GGGGACTTAACTGTGGGGGTCTTTATATATTTGAAGTAATTTTAGCTTCCAAAAACAATAAAATAAAAGTAATATCCACTGAAAGAGAGAGCACAGCAAACAGCTCAG---------AGCCAGAACTGCAAGCACCTCGCTCCCCAGATCAACATATGTGGTGACGAATGACAAATTTATTTTTCTACAAAGTTTGTATATATGTAAAACTGCTGAAGTGCATCAAGATGTCAAGTGCTTTTGGTGGCCACCCAGGCTGCTTTGAAAGATAACCAGATGAAAGCTCCACTCTAGAAGTGGACAGAGCAGCAACAGTGCTTTCCAG---AGACTCTGGAAGGCTTTACTGACAAGCAGAG-GGGGCTGCCCCTGCGTACCTCAAATGCTAATGATCATTCTCAATACTTGCCCCAAAAGTGAGCTGTAAT-----AACACAGTCTTTGCAT chr4 + 94230402 31976661 31976660 31978770 31976661 31976660 31978770 2110 TTTATCTCTGGTTTGTGGCTTGCAGATACTTTCTGTCACGAACAACACAGAATGTGCGAAGCTACTGGAGGAAATCAAATGCGCACACTGCTCACCTCATGCCCAGAATCTTTTCCACTCACCTGAGAAAGGGGAAACTTCTGAAAGAGAACTAACTCTTCCCTACTTGTGCAAAGACTATTGTAAAGAATTCTATTATACTTGCAGAGGTCACTTACCAGGTAA--------AACCTATAA-CAAAATATGGAACTGAAGGATGTCTGCTTTGAAATGTTGATATTGCCTGAGTAGTCGTAGATCCAACTCTTAACCAGGTGAAATCACCACTGATATCCAGGGGATTTTGCTCAAAGACAGAATATCTCAGGGCCTCCACGGTGATTCTTTCTTATGTGGAGAGTTAATATTTTGAGCTCTCCTA-TTAAACTGACTGTGAAACACAGGGTTATTTGTTATCAAAGGCACCTGAAGCTATTACCTTTTTTGTATATTGGTGTGTTCACTCAAATCATGTAAGCGATTAGTCGGCCATCCAAAAGGCTATACTAAATGACAGATAGC---TTTCAAATAAAAGAAATAAGGAGCGCTGGCACTGCAGGCTGCAGACACTACAGGCTGATAAGTGTTTTTTCTG-----------GGTACCCTAGAAACTCGTGGTTTTTTTCAACA-GTTTAAAGCCCCTTGAAATCAAAGGGAGCT-----ATTTGGTAGATTTCTGTGTTCTTTGAATCGGTTCCAACATGCTGTTAGCAACC---AAATTCTGAACTAACCTAACACTTCCTCACTGCAGCCAGTAAAGTTAGCTTGACATAACCAATA------GCAGAATGTGGCCAGTATTGTCTAA--GGCAG-TCACCAAATGTGTGCTATCACTTGTAAATAAATCAACAAAATAACCACAG---------AAGATGGTCCTTTTAGAAACACTG---TTGTAATGTACTATTGTATTAAATAACATCTTTGGTATTCTCAATAGTAAATTA------------TTTATATGTTTAAGGCTGTCATTTTTAAACTATGCTTTCTTCTTTTTCCAAACACTGCTTATAAATAATGTCACACAGGAGAAAATAATTAAACTGGTTAAGATTTTTGACTA--GCAGCACAGGCTGGAAAGCAGAGTTAATAAGGATAAGAAAAATTAATTTACAAATACAAACTTCTTGGTCTATGAACAGAGCTT--------TGTAATAGAACATAAGCA-TATTTGAGTAAAAAGGATAGTTTCAG---TGGATGAGATTTGGAGGAGGGTTTCTTAATTGCACGTGTACAGTGTGTACTTGTTTTCTATGAAATCCCAAGAGTGCAGGGATTTTTCCAGT---------GTTCTTTTATTGGCTTGAGAAAATATTTTGAATTGACTTACTTTTTCCCCTTTGC-TGTGGTTTAACATGTATCTCAACCCATTCAAATATGAAAATATTATTATTGTCTTTATAAACTA-AGAGATGTTTCTAAGGCTTTCTTAAACCAGCTGTTTCTTGCTCTTTATCACATTCCCCAAAGCGAAGCAGAATGGATCACAGTTGCCAAGACTGCCTGCTGAACAGCGATAATAGATTAGATATTTCAAATGTTTAGCCCACGTGAGAAGTCA-GCACAAAGTTTTTTTTTTTA----CATGGGTTGTAACTAATGCAAACGATTAGCATATTCAGCAGAGTAAGTCCCTTACGGTTGTTTAGT------------GAAATTCTGTGTTTCCGAGGACACAACT-------TTTTTA---ATTGgaaaaagtgaaaggggggaaaagggaggaagaaggaggag-atggagagagggagagagaaagagaaagggCTGAGCAGCACAGGAGCTATAGCCACAGGAACCTCACTCCTCAGATCAACATCTGTGGTGACGAATGACAAATTTATTTTTCTACAAAGTTTGTGTATATGTAAAACTGCTGAAGTGCATCAAGATGTCAAGTGCTTTTTGTGACCACCCAGCTTGCCTTGAAAGATAACCAGATGAAAGCATAACTTTAGCACTGGACAGAGC----ACTGTGCTTTGCAGGAAAAGAGCTTACATACTTTAGCATCAGTTAAAGTAGGATTTTTCCTACATCAATCAGACACTAATAATCATTTTATATACTTCTTCTGAAAGTGGGTAGTACTAAAAAAAAAAAGTTGTTGCAT ...:::....:...:......x......:.......:..x................x....:...................:....x:.....x..x...x.:..:.::..x................---.:...:::.:x........x...::x.....::xx:.x..............:..........x...:......x....:..:x.x........--------..:x:....-:......x:xx....x.x:..:..:-:.x.:.:..::.x:..---.:.:.:.:x.::.xx.:xx....:--------..:....:-----------------x..:....::xx.:.---....:..----------------...:.x:..:..------.:....:....:x.:x.:.x:x.-..xx....x..x.:..-----...xxxx....x..:xx..x.xx.x:.x::...x.::xx......xx.:.x..-.:.x:.:.----..x...x.------..::..:x..---..x:...-..x:.:..x....:.:.:---:..:.x.:.--------------..:...xx::x..:x.--..:..x.------..x:.x:...::..:.:.:-----------.x.x.xx..xx..xx.:xx..:..:...x...-:x:.:.x:.x:x.xx.x..:::..::..::-----.:...xx....x-----.x..:..:..-------...x..::x:....x..:.---...x.xxx.x..x..xx.:.....:.x..-.:x.::x.x...xx..xx.:.x.x.x.x..x:..------.:..:.x.x.xxx...x:.x..:..--.....-.x.xx....x..x..-----....x:.:x.:x:x....xxx...:..x..---------:...x...xx.xxx...:.:.:x.---..x.x...:.-...x..:.:.x:-.....x::.:..---.x.x..x...:x..:------------:......:..:.xx.x.-.x.......-------------------------------.:..x..x...----------------------------..:x:.x.....::.:--.:x..x:x:.:.....----..x.:..:.x:..x:.::.....-......xx..x...xx..x:..:..---..::..:..::x--------.x..x.::.:xx......-.....:..x.....:x.x:x...x..---:.x.x:.x::x:x:..::::x...:....x...-::......x.x.--....-......x...---....:..:x.::x:..:....x:.x.---------.:...:...x.::.:.x.x.:..:.......x.x.:x..:...x--.:.......-.x.:.:x......:.....x...........-.......................:......:.-..xx...........x....::.x..x............x.......................:...:.....:.:....:......x...:x....:.x:.:x..:.....:..........::x:........:-----.xx..:.xx...-.:x:x:.::x...x::....----:..:::...x..x.:..::x...:x.......x..:.-------------:....x:..:.:..x.------------:.x..x..:x:...--.:....x:....-------.:....---...x...:x.:.xxx..xxxxx....:x:.x:..:x.::..x.:-..xx.xx..::.......x.x::x...x:...x..---------...:.x.:.::..:.x.....:....:...........x.........................................:............................................x...:........x:...:.......................x:x...:...x.x..........----..x.......x...---.::xx..x:x.x:.....x::x..:x:.:..-:..::.x::...:.:.xxx...:.::.....:......:.xx......x::.::......:.:x...x.-----..x.x...:x...... 128M3I94M8D9M1D25M1I16M3I24M8I8M17I15M3I7M16I12M6I23M1D16M5I53M1I8M4I8M6I10M3I7M1I18M3D9M14I16M2I7M6I19M11D32M1D30M5D12M5I10M7I19M3D29M1I34M6D25M2D5M1D15M5I30M9D24M3D10M1I12M1I12M3I15M12D17M1I9M31I11M28I16M2D16M4I23M1I25M3I12M8D18M1D26M3D33M1I12M2I4M1I10M3I26M9D44M2I9M1D31M1I32M1D136M5I12M1D20M4D37M13I16M12D14M2I12M7D6M3D44M1D35M9I190M4D14M3I31M1I69M5I16M 1259/1872 67.3% 2110/94230402 0.0% 361/1872 19.3% 112675919 77538636 +29981 chr4 + 190214555 144658749 144658748 144659864 1116 ACATTAGGTGCTTCTAATGAGTCTTTTTATATTTTTTAAAGGTTTCCTTCAAACAACTGCGGATGAGTTTTGCTTTTACTATGCAAGAAAAGATGGTGGGTTGTGCTTTCCAGATTTTCCAAGAAAACAAGTCAGAGGACCAGCATCTAACTACTTGGACCAGATGGAAGAATATGACAAAGTGGAAGAGATCAGCAGGTTCATAAAGATAAATGCTCTTTAATCTTTTTAAAAAAACCCAACTGACAAATCTTGTGGTTTTGACAGTGAATCAACT--GTCTGTGCTTATGTTCAGCAGCTATATCCTCCAGATGCTTTAGTTTTTTCT-CTGTGGTAGTTTGTTTCT-CTAAA---------ATTCTAGCTTAAATGCTTT--TAATACTT-AGACTACTAATCGTATATTATGAGCTTGGCTT-------CTC------------TATGACTCATGTCAA------------TTTTATGGGTATAGTTTTAAGCCTGAATTTTATGATTGTTGTTAGTCTATGGCACTGTGAAAATGTTCAGCACAATTACCATTAG------CAAATCAGGTTTTTCTAAATAGATCTTAGAACTTTCTCTCTACATGCCTTCCA---TAAGGTTTATTTA------TTGTGAGTAAA---------ACTAATTTTAATTATA-GTCGCTGA----------------AATATGAGAAAAT-----GAGATTATGACATTT--------GAAAATAT----------ATACATGTTTTGATTCTCTT---------ATTTTAC-------------TTTCTGAAAGAAGGCTGTTTTGTTTTTTGCCATTGAAAGAATTTAAAAGAA---CCACTTAAAAGAATTATATTGTGACCCTTGG----GTTAGCAAGCAC---TTCATGGTTCTCAAAACCATGATTCCTAGAGGAAATAGA---GTTTGAAAA---------GGATGCCAAGTGCATCCCTTATCTCCTTCATCTC---------------AAGAAAA-GCTTACCGGTTTTCTTTAAT---TTGTTTAGAAAGCACAAACACAACTGCTTCTGTATTCAGGAGGTTGTGAGTGGGCTGCGGCAGCCCGTTGGTGCCCTGCATAGTGGGGATGGCTCGCAACGTCTCTTCATTCTGGAAAAAGAAGGTTATGTGAAGATACTTACCCCTGAAGGAGAAATTTTCAAGGAGCCTTATTTGGACATTCACAAACTTGTTCAAAGTGGAATAAAGGTTGGCTTTTTAAATTTTATTTATTT chr4 + 94230402 31983558 31983557 31984788 31983558 31983557 31984788 1231 ACACTAAATATTTGTAT---GCTCTTTTGCATTTTT--AAGGTTTTCTCCAAACTACAGCTGATGAGTTTTGCTTTTACTATGCAAGAAAAGATGGTGGTGTATGCTTTCCAGATTTTCCAAGAAAACAAGTGCGAGGGCCAGCTTCTAACTCCCTGGACCACATGGAGGAATATGACAAAGAGGAAGAGATCAGCAGGTTCATAAAGATAAATGTTGTTTAATCT----GAAAAAAATAAGATCGCAAAGCCTGTGGTTTTCACAGTGAACCAGCTCAGTCTGTGCTTATGCTCAGCAGCTGTGTTTTCCAGATG-----GTACTTTCTGTTGCTGTAGCTGGTGTATGCTGAAGAGAAAGTTACATTAGCTTCAATATTTCACTAATGTTTTAAGTTGCTAAAAG-GTGTTAGAATCTTTGCTTGATCCAACCCATGGATCTTGGTTAGGGTCCATGTTGAGGATGATACATCTTTCTAGGATGCCATTTCAA-CCTGAATTTAACA-------TTA--CTAAGTAACTATGA----------CAGGTTTATTATTAAACTATCTATATTATGTTTTTC------AATCTT------TTTCTTCCATTTGTTTTTCACTGTGAAAATTATTAAATTAGGTTGTAAATAAATTATAAGTCACTAATC---ATTATAAGTCACTAATGGACTTTCAAAACCAAATTTTGGAAAATTGCTGGAATTTACTATGTTTATTGTACAGTAGATTTTTTTCTATTAATAAATGTTTTTTCTCTTTTTTAAACTACATTTTATGTATTAGTCCAAATTTCAGATCTGAGATTACTTGATTTTCTCTTCCTTATATA---CAAAACAAATTTTGCTCAAGTGAAGTTCAATTTGATTTTCAGTACTGTCTGCATGCATACGTTCGAGG------AAATAATTTATGCTGGACTGTATAGCTGTGTTTGTAAAATCACTACAGAAAAATCATTTTATCTTTTAGGGACATTATTTTGTCACGGTTATGAGAAAGAAGACATTTCTCACtattttttaatatattttttaGAAAGCACAAGCACAACTGCTTCTGTATTCAGGAAGTCATGAGCGGACTAAGGCAGCCTGTTGGAGCGGTACATTGTGGGGATGGATCTCATCGCCTCTTTATTCTTGAGAAAGAAGGATATGTGAAGATTTTCAGTCCTGAAGGAGACATGATCAAGGAACCTTTTTTGGATATACACAAGCTTGTTCAAAGTGGAATAAAGGTTGGAATTTTTACTTATATCTATTT ...:..::.::..x..x---.:::....::......--.......:..:.....x..x..x......................................xx.:.............................xx....:.....x.......x.:.......x.....:.............x................................:.x........----:......x:x.:x.x:....x.:.........x........:..:..--.............:.........:.:.::........-----..x:.....-:..:x....:.x..x.x.-..:..---------.:x:......x...::..:--....::..-.:::.:....xx.-:.:...x:.x...x....-------.:.------------..x.:::.....::.------------...:xx..:.::x:...:..-.........x.::-------...--...x.xx...:...----------..x:x...::....:------:.x..:.x.......------:.....------..:::..:.:x..::..:..---.:.::x.....x.------....:.:....---------......:---......-...:..:.----------------...x.x:......-----..:x...:x.::...--------.x.:..x.----------...x.......xx:...:..---------......:-------------....x..xxx:..::.::..x:....:.x::x:.x.x.x.---:....x..---:::..:..:x...x.x:.x.x...:::.::.----..:x...x...:---...:x..------...:x..xxx.x..:..xx:x....x---.....x...---------.:.x:x:x.x.x:...::...xxxx.x.:..:.:---------------.....:.-::..x:.:x.x..:......---..x..............:.......................:..::....:..:..:x.......:.....x..xx.:...x..........x..x..x..:.....:.....x..:........x...........x:.:.x:...........x..xx.......:....x......:..x.....:..........................xx....x.x..x...:..... 17M3D16M2D188M4D47M2I37M5D9M1I18M1I5M9I19M2I8M1I13M1D18M7I3M12I15M12I20M1D13M7D3M2D14M10D15M6I15M6D6M6D20M3I13M6I11M9I7M3D6M1I8M16I13M5I15M8I8M10I20M9I7M13I40M3D8M3I31M4I12M3I7M6D26M3I9M9I34M15I7M1I20M3I236M 779/1057 73.7% 1231/94230402 0.0% 233/1057 22.0% 112675191 77539364 +3323 chr4 + 190214555 144663149 144663148 144663211 63 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAAGAGAATCACTTGAAC chr4 + 94230402 76033197 76033196 76033257 76033197 76033196 76033257 61 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAAC ..::....--.....x......:.........:::.........x.xx.x...x......... 8M2D53M 49/61 80.3% 61/94230402 0.0% 2/61 3.3% 68629952 NA +3104 chr4 + 190214555 144668193 144668192 144668259 67 TATAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCCCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:.:...........::.:......x.xx.x...x...........x.:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 68634982 NA +3042 chr4 + 190214555 144668621 144668620 144668681 61 GCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::...x......:.........::::........x:xx.x...x.:........::.:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 68635417 NA +3810 chr4 + 190214555 144670013 144670012 144670073 61 GTGCACCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x..:...:...........::........x.xx.x...x.:...........:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 68636809 NA +3566 chr4 + 190214555 144671855 144671854 144671926 72 GCACCTGTAATCTCAGCTACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.::..........::.:......x.xx.x...x.............:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 68638649 NA +23638 chr4 + 190214555 144673869 144673868 144674361 493 CTTTCAGGCTGTATGTTAAGCTGGCAAAGAACTGTCCCCTT-TCGTACCTGCATCTGAATCTATGGAAGTTAAT--------TTGGTTGTGGATAGAGTAAATTAGATGTGAAAAATTGAAAAAGGAAAGAGGTTAATGCTTGATCATCTTACTTGCACATGTAAGGATTGCAGGGCTCTGTGTTTCCTTGAGAGAATTCCCATGATGCCAATTAACCTAACTTATTCCAAAACAATTCTCTGTTTGGAAAGAATAATTTTCATTGTGGGTGTTCCTTGAAATTGTATGCCTCATCCCCTGTTATTACTGAGATGTGTGCTGTGCAATTGAAAGTACCAACCTCGTTTCCATACACTGTATAGATTAGAGCTGTATCCCACACACAGTGTCAAATAA----TGTTTTAATTTTGTCCAATGAACACATATTTT---AACTTCTAGCAATTTTTTAAAATGTGCGAAGGCCATC-TCTGCTTAA--------TGTTAAACTCAATATCTTATGTCAAAA chr4 + 94230402 31993323 31993322 31993838 31993323 31993322 31993838 516 CTCTCAGGTTGTAAGCTGACCAGATGAAGAATTGCCAGTTTATTCTAAGGAAATCTGAGTCAATAAAACATGATCATTTCTGTTGATTTTGGGTAGTATGTCTTAGATTTGAGGAGCTGAGAGGGGAAAGAAGATAATACTTTATCATTTTACATGCACATGTGTAGATTTTAATGTTCTGTGTTTCCTTCAGAGGAATCCCATGGTGCCAATTAACCTAACTTATTCCAAAACAATTTGCTGTTTGGAAAGAATAATTTTCATTGTGGGTGTTCCATGAAATTGTATGCCTTATACCCTGTTATTACTGAGACGTGTGTAGTGCAATTGAGAGTGCCAGTTTCTTTTCCATGCACTGCATAGATTATAGCTGTATCCCACACACAGTGCTAGATAATCCCTACTTTAATTTTGTTATGTGTACAAATCCTTTCTGAACATTTAGCGG-TTTTAAAAATGTA-AAAATCCATCATCTCCTGAAACTGCTTTTGTTAAAACCGAAAGCTGAATTTAGAA ..:.....:....x.:.:.x.x.:::.....:..:.xx:..-.:x..xxx:x......:..x..::..xx.:..--------...:..x...:...x:.:xx......x...::.::...:.::.......:.x....:...x.....:....x.........:x:....x:.:x.:.............x....:.x.......:................................:x....................................x...............:..x.................:.....:x..........:...:...:::..x.......:.....:........x.....................::.:....----.::...........:xx:..x...x..x:...---...x.:....::-....x.......:-:..:x.....-...x..x..--------.......x:.:.x.x..x.xx.:.:.. 41M1I32M8I315M4I32M3I12M1D13M1D10M1I9M8I27M 377/491 76.8% 516/94230402 0.0% 27/491 5.5% 112680546 77534009 +3159 chr4 + 190214555 144684186 144684185 144684272 87 AACATGACAAAAC------CCGTCTCTATGAAAAATACAAAAAAAAAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 60969115 60969114 60969204 60969115 60969114 60969204 90 AAGGTGACAAAATACTTAGCCTTTTTTCTTTAAAA---AAAAAAAAAAAAGGCTTTTTTTTTTGTCCTTTTTTTTCACTCCCTTTCTGTTTTT ..x:........:------..x.:.:.x.xx....---.............:x..........x.::........:x:.:::...:.x..... 13M6I16M3D55M 62/84 73.8% 90/94230402 0.0% 9/84 10.7% 83715071 NA +3016 chr4 + 190214555 144684207 144684206 144684276 70 ATGAAAAATACAAAAAAAAAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 81754722 81754721 81754791 81754722 81754721 81754791 70 ATAAAAGCCACAGAGAGAAAAAAAAATCTTTTTTTTTTTCTGATTATTCCCATGTATTTAATTTTTTTTT ..:...:x:...:.:.:......:...:...........:.xx..x..:::x.x.x...xx......... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 62929485 NA +3141 chr4 + 190214555 144684210 144684209 144684261 52 AAAAATACAAAAAAAAAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 38668717 38668716 38668768 38668717 38668716 38668768 52 AAGAAGACATGAAAAAAAGAGGATATTTTTTCTTTCTTCTTTTTCTTTTTTT ..:..x...x:.......:..:..x......:...:..:.....:....... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 106015493 84199062 +4871 chr4 + 190214555 144686100 144686099 144686323 224 ACTGCTTTCTTGGAACAGCTTGTTGCTGAAGCATA----AAGAGAGGTTACTCTTGGTTTAGCCTTGAGTAGCATATGAAT--TGGTTAAGGAAGTAAGTGTGGCTCACCCACCAAATTACAGTGGCCATAATATAATTAAGTTCGGTATCCTCCCTAGAG-GCTCTAAG-AAGTAT--TATTATGACACCAAACTTAAAGAAGAGGGATTTTTTTTTTAAGAGCCAGGAAATT chr4 + 94230402 80582826 80582825 80583050 80582826 80582825 80583050 225 ACTATATTTTTACAGCAGTTAGTT-CTACAGCACACATGAGGGAAAGTTACTCT-------GTCCTATGTAATATACAAGTGTTGGTTCAAGAAGTAACTATTGCTGAGCCACTAATTAATGGTGACCACAGCATAATTAAGTTCAACGTTCTCAAGGGAGTGATTGAAGCAAATACAGGACTGTGACACTAAACTT-TTGATAATGAATTTTTTTTCAAGGGGTAAGTTAGTT ...::x..:..:x.:...:.x...-..:x....:.----.:.::.:........-------.:.:.:x...::...::.:.--.....x.:.......x.:.x...x.x....:..x.x.::...:...:.::............::::.:...xxx:...-.x.:x...-..:..:--x.:.:......:......-xx..x:.x.:.........:x.:.:.:x..xx.:.. 24M1D10M4I15M7D20M2I78M1I8M1I6M2I18M1D36M 141/215 65.6% 225/94230402 0.0% 19/215 8.8% 64103274 NA +16049 chr4 + 190214555 144689128 144689127 144689664 537 ATTTACAAGACA--GTTTGATTTCAGAGAGCTTTTATTAATGTATTTTATTTCATTCAGAGTGTGTTCTTTATAACAAACAGGAAATCTCACTAACTCTAATCCAAAGTTTGAGCAATGGAAAGGCACATAGATGATGTCGTACATTATAAATATTTTTTGTACTTGCTAGTTTATTTCTAAGGAAATTATGAGAATGACATCATAATGATGACTGACTTTTATTAGTGTTTTTGCTCTGAAGATCTAGAC------------AAGTAGTTACAAAGAAAAACAAAT-------------------------TGTCTAGTGTTACCGCTTAATACTTTG----CCTGATGTTTTCTAGTGACATTAATCTTGGGAAGTGATTCCAGGACTTCTATGCTACCATGAGTTCTCTT--------------TTACATATTTATCATCAAAAAGAACATGGTGGTAAAGTACAA----CATTTTTAAAAACTC----AAAACAGGAAATAATTACTTTTGATTTTTGCCTGGAGCA----CTGCTTGGATTAGTCTAC-AACTTGAAAA----------ACAATTTTAGACCAATATTTTATAGACCATTATTTGTTACTAT chr4 + 94230402 32004280 32004279 32004879 32004280 32004279 32004879 600 ACTTACAAAAAATGGCTTAACTTCAGAAAAAATTTCCTAATGGAATCCATTCTGCCCAGAAGGTGTTCTTTTTAACAAATGGGAAACATCACTAAGTTTAACTCAAAGTTTGAGCAATGGAAAGCAACATAGATGATGTCAGACATTACAAATATTATTTGTACTTGCTAGTTTACTTCAAGGGAAATTATGAGAATGACATCATAATGATGACTAATTTTTATTAGTGTTTTCTCTCAGAAACTCTAGACTTACAGTTATATATATATTTAAAAAACAAAACAAACAAAAAACCCAGCTTTTAAAATACTGTACCTGTTATTCTTTTCTAACACTTTGAGATTCTCTTATTTGTAAATGGTATTAATATTTTAAA---ATCCCA-----TTGATGCTCTCAGCTGTTATTCTAGTCATTTGACACattatatatatat-atatatattattatttttGTCCAGAAGAATTTCTGTTATTTAATGCTCATAAAAGATAGGAAATGACCAC-----ATCTTTGTCTAAATTAATTGCTGCTTAGGTTGGCCCATGAACCTATAAACTCTGCTGACACAGTTGTAGCCAAATTTTTT---GACAACAATCTCTTACTAT .:......:.x.--.:..:.:......:.:xx...x:.....x.x.::...:::::....:x.........x.......::.....:x.......x.:...::.....................xx..............:x......:.......x..................:...x.:.................................:.:...............:x...x...:x.......------------.x:..x...x...:x........:-------------------------.::..:x.:..x::x::...:......----:..xx.:...x:x.:..::......x..xx:..---..:...-----.:x.....x:..xxx...x.::.--------------...:....x...-..xx.x.xx.x:..xx.x..xx..x.x..----::..x..x..x:...----..:.:.......:.::..-----..:....:..::.x:.----......:.:..:.:.:.:-...:.:x...----------...:..x...x.x...x....---...x.:x..:.x....... 12M2I237M12I24M25I27M4I33M3D6M5D23M14I12M1D29M4I15M4I18M5D16M4I18M1I10M10I21M3D19M 376/520 72.3% 600/94230402 0.0% 97/520 18.7% 112684848 77529707 +23638 chr4 + 190214555 144694101 144694100 144694633 533 TATCAAAGATTCAAAG-------AATTTGATTCTGCTACTTGGTAAATTGCAAGTTTAA----TTGACATATAAATCATGAAAATACAAACTCTA-------CTTAGAAAATAATTTTTAAAGTACCGTAATTGTT----ATATGACCTTGAAGTTCCAGCAATCTATTGCATAACTCTTCAAGAGAAGTCACATGGAGGAAACCTCATATTTCCTTAAATTTATTAGTGTTCCTTGGTGGTCTAAA---CTATTGGGGTTTTTTTTTTCAAGGTTTCTTTTCAAAGCAATAATCTTACTTAATTGCTTAATGTTTTCTCTTATATAAGTCAATTTGAGTTCTTATTTAGAGTAACAATA-GAAATACATAATGGCTAAGAGTAGTGAAACATGACTAGGAAACTCAAGTATACCAGTGTTATATTTCTATATAATGACGTGAAGATAATGCTTTTAGCTGCATGACCAGCATATTAGCCACACATCGTAAAAACCAAACTTCATAAAAGCAAGAGGTCAAATTCATTAAAAACAATTTTGTACCCTTTGCTACAGTTA chr4 + 94230402 32006234 32006233 32006776 32006234 32006233 32006776 543 TATCAAGGATTCAAAGGGATTAGACTTTAATTTGTCACTTTAGTATACTATACCTTTAAATTGTTGATGTATAAGTTGTATAAATAGAAACACCATAAATCTCTTAAAAAAT----------GTACTATAATTTTTTTATGTATGACCTTTAAGTAACAGCAGTCTATTGCATAACTCTGCAGGGGAAGTCACATGGTGGAAACCTCATATTTCCTTAAATTTATGGTTGTTTCTTGGTGGTCTAAAAGTCTTTT----TTTTTTTTTCTTAAGTTCCTTTTCAAAGTTGTAATCTTAGTAAATTGTTTAATGTTTTGTCTAATGCGGGTCAATGTAAGTTCTTATTTAGATTTATAATAGGAAATATATAACGTCAGATACCAATGAAGCCTGGCTAATAAAGTCAGGGATACCAGTGTTATGTTTCATTATAATGATGTGAAGATAATGCCTTTAGCTGCATAACCACCACATTAGCTACAGACCATAAAGA--AATCTTTATGAAATCACAGGGTCAGATTGAATAAGAGAAAAATCTCAATTTTTTTTCCAGTCA ......:.........-------.x...:...:xx.xx:..:...x.:.::.xx.....----....::.....:.::.:x.....x....x.:.-------....:.....----------....::.....x..----:.........x....xx.....:................x..:.:............x...........................x:x....:..............---..x..----.........::x.:...:..........:x:........x.x.....:..........x...x..::::......x.:..............x.x.:....-......:....:.x.x:.x.x:.:....:.x..:...:x...x...:.x.............:....xx........:.............:...........:....x..:......:...x.:.:....:.--..x...:..:...x..x::.....:...x.x...:.:x..xx.:x:.x::...x:.x....:. 16M7I36M4I32M7I10M10D14M4I107M3I5M4D101M1I133M2D63M 396/517 76.6% 543/94230402 0.0% 42/517 8.1% 112687867 77526688 +6891 chr4 + 190214555 144695726 144695725 144696016 291 TTTTAGAACAAAAATTTAGATT----ACATCAAGCCTTACA-AATCATTCATTAATAAACCAGCCACTGGTAACACATGCCACGTAAATCTCCTGAAAAGATATCCACAAATCTTTATCAAAAGTATGTGGTGAGCCTGGTGCTAAATATAAGTATAAATGTGCATGTCCATGCCTGCAATTTTCTGAAGTCCAAAAGTTCTTTGGATGGCAAGCAGCAAGTTAA----TACTTCTTCTACATAACGTGCACGCAT-TCCTCATCTGATCAAAATGTAGGACTTCACATTCTCTACTTCAA chr4 + 94230402 32010444 32010443 32010735 32010444 32010443 32010735 292 TCTAAGAACACAAATTCTGATTTTTCACATTATGTTTAGCGTAATCATCGACTCAGAAA------ACCAGTAACATATGCAACCAGCATTTGCTTTGAAGATA-CGACACATCATTACCAAAACTATGCTGAATGC-TGATACTAAATATAGGCTGAAATGTGCTTCTTCATGCATCCAGATTTCAGCAGTCCAAAAGTTCTTCAGATGTTAGGGAACAGAATAGCGTTTGGTTTATCTATAGAATATGCACGCACATTCTTTGCCAACTAAGGTG-ATGTGTTCCCATTTTTTGTACCAA .:.x......x.....:x....----....:.x.::.x:.:-......:x.:.x.x...------..::......:....x..xx:x..:.x..xx:......-.x...x...x...:.....x....:x.x:x..-..:.:.........:.:xx........x.x.:.....x.x..:x....x.x...............::....x:.:.x.:..::x..:----.:x..:x....:.x..::........:-.:..:xx.::.::..::..-.x.xx...x....:.:.::x:... 22M4I15M1I17M6D38M1D32M1D88M4I27M1I19M1D24M 187/282 66.3% 292/94230402 0.0% 19/282 6.7% 112685282 77529273 +67597 chr4 + 190214555 144705678 144705677 144708320 2643 GAAGATAAAATGCCTTTCTATTTAAGAACATGAAGATGTTTTAATTGTTATAGCATTTGGCATG---------CCTAATGTATA-------CAATCCTTGACATTCATATAATAACACAAGAAAGTTGTTTGGGATTTTGCTTTAATTTCCTAGTGTCCCCTTTCCCCTCTAGCATTTCTCCCACTCCTTCCCCAGCCGTGGCCTTTAGGCATCCTCTGGCTGCTTCATCCTTCTGTAAAGAAA------AACCCTATGCAGCGAAGGGATTCATGTAAAA-CTGCCTCATTTCTAGATAGATAGGCAAGGCTGCCTATTACCTA----------GCTATGATGAACAGACCACCATCGTTGTGACAACTGATGTAGATGCCTCCAGGGTAAAGCAAAGGTTTACATATTACACAAGCAATTTAACTGTTTTCTAAACATATTGCCAAGACAGTGGGAGTTGGCAGCCCACACTGTGTTTTAGGTTTTGGAGACTTGGATTAGAAGTGACTGTTGATTATGAACCTTTTTATTTGTCTTCTATGAACTACAAGCAACCTAGTAACCCGGGAAAGAATTCTTCACAGCACTTAAACTTGTCCTCCTAGCGGCCC-AAGATTACATACACAAATCACTTGACAAAAGTGGTGTAAGACTCTTGTACATAGATAACCACACAAGACAATTGTCTTGTTCTAACCCTTAAAGAGTTCCACAAAGTGAAATGTTTTATAATCCTTTTTTGTGCAGTAGGCAAGGAAGAAAAGAAAGGAGGTTGGGCAAAGATTATCCAAAAGAAAGAAAGAGACTCTTTTGGGGTTCCAGTTGAAACACAATAAAGAACATAATTAACTTTACAATTCTTTGTGTTTTTCATTTGACTGCAGGGAGGAGATGAAAGAGGACTGCTAAGCCTCGCATTCCATCCCAATTACAAGAAAAATGGAAAGTTGTATGTGTCCTATACCACCAACCAAGAACGGTGGGCTATCGGGCCTCATGACCACATTCTTAGGGTTGTGGAATACACAGTATCCAGGTATCACTAAAAGGCATCGAAGCATAGAAATTTCTCATCTTATTTTCTCATCATCTTTTCATAAGTTTTTTTATTTAGAAGTTGC---------AAATAAGTAACC------ATAAGGT---------GGCAATAATTAAATCATTACCTCCATCTTGCTGAAAACTCCATATGTGTCTTTAAGAG-AAATGGAGAACAACAA-----------------TGGTTTTGACATTTTTCC-----------TCAATTATCTCTCAACTTAAAGG------CTACCTCTGAAACTTGGAAAATAATGTGATTTTCCAGCAATTTCTGTTAGCTCCATTTCAAATATATGTTTCCTTATTTACTATGTGCCAGGAGTTTGTTTTTTCATTTATATACTATTCACTT----------TCTGATGGACTCATCTTAAATCTTTTAA-------CAGTCATGGT-----------ATTGTTTTC---TTCCCACAATGTAGAAAAAATCCACACCAAGTTGATTTGAGAACAGCCAGAGTCTTTCTTGAAGTTGCAGAACTCCACAGAAAGCATCTGGGAGGACAACTGCTCTTTGGCCCTGACGGCTTTTTGTACATCATTCTTGGTGATGGGATGATTACACTGGATGATATGGAAGAAATGGATGGGTTAAGGTA-AAAGGCTGATCACAGAT--------GGGTTCCTCTCAAGGTTAA--AATAGTTTAAGTGCCAGAAGAAAAGGTGGGCAC------------------------------CAG----TGAATTAAG-----AACCATCTTT--GAATGGTCACCTTGGTTAAATACTTAACTTTTGTCATCAGTGTCTGCATTTATG-------AAATGAAGAGGAATTCACTAATATGCTACGTGATCTTTTGTTTGTCATGAAAAGAGTTACTGTTGTGTAGTTCTCTGTTCCAGGGCTGCCTCTGCTCCACAAAGC------ACTGAGAAGCAGTGGCCCTGTACAACCATAC-----TGCCTCTCAACACTGTGTAA--TAGGCTAACACCGCCCAGCGAACCTTCCTGGGAGATATAGAATACATAGGTTTAGGCTGACAAAAATTAAGAGAACAGAGGCAAAAAAAAAAAAGCAGTGTACTACTGATGCCACAGTCCTCAGCCAC--CATCACACAGTGTCTTGGTTCAGTT----GCTTGTCTGGAACG-GCCCAGTTTCATTTTCCACAATAAGG---------AATTTATTTTATTTAATTATTCC-----------------TTTATTT--ATTCAGACAAGGTCTCACTCTATTGCT---CAGGCCAGCATGTAGCAGCACCA-TTATGGCTCACTGTGGCTTCA------------AACCCCTGGGCTCAAGA---GATCCGCCTGGCCGCATGCCACCACATC--------TGGCTCATTTTAAAAT--------TTTTTGTAGAGATGGAGTC-----------------------------TCGCTATGTTGC-------CAGGCTGGCC-------TTGAACTCTTGGCATTAAACAAT----CCTCTCACCTTGG------CTTCCCAAAGTGCTGGGATTACAG------------ACGTGAGCCACTGCATCCAGCCACTTTAATATTTTATTTCAACTAAGGGGATGATTTTTTC-----ATCAATAGAGCAACCTCACCATATTTAATATAGGTGAAATATATAATGAAAATGTAAAACACATACTCTGTCCCCCAA-TTTCTCAGTGATTTCACAGGCTCAGTGCTACGGCTGGATGTGGACACAGACATGTGCAACGTGCCTTATTCCATACCAAGGAGCAACCCACACTTCAACAGCACCAACCAGCCCCCCGAAGTGTTTGCTCATGGGCTCCACGATCCAGGCAGGTGAGAACA chr4 + 94230402 32019261 32019260 32022001 32019261 32019260 32022001 2741 GAGGAGAAAATTGCCTTCTATTTAAATACATACTG-TTTGTGCATTGTCACAGTACATTACATGGATTTGATGTTTAACATATAGCTGTACTAATCTTCGTGGTAAACGTAATAACAAAAGAAAGTTGTTTGGAGATTT------------------------------------TTTCTC-----------------------------------------------TTTTTATTTAAAAAAATAACAAAAACCTTTCCATCGAAGGACCACATGTAAAAACTATGGTTTCTCTGTACGGAGAC-CAAGGCTGCTTATTACCTACAGTATACTAGCTATGATGAACAGACCACCATAGTTGTGACAACTGATGTTGCTGCCTCCAGGGTAAAACAAAGGTTTACATATTACACAAGCAATTTAACTGTTTTCTAAACATATTGCCAAGACAGTGGGAGCTGGCAGCAAGCACTGTGTTTTAGGTTTTGGATACTTGGATTAGAACCGACTGCTGATTATAGACCTTTTTATTTGTCCTCTACGAATTACAAGCAACCTAGTAACCCAGCAAAGAATCCTTCACAGCACTTAAAATTGTCTTCATGGCTTCCCAAAGATTACATACACAAATCACTCCACAAAAATGGTGCAAGAGACTTGTGCATAGATAACTACATGAGACAATTGTCTTGTTCTAA--CTTAAAGAGTTCCCCAAAGTGAAATGTTTTATAATCC-TTTTTGTGCAGTAGTC-AGGAAAGAAATAAAAGAGTTTGGGCAAAGATTATCCACAAGAAAGAAA---CTTTTTTTTTGGTTCCAGCTGCAACACAATAAAGAACATAATTAACTTCACAATTCTTTGTGTTTTTCATTTGACTGCAGGGAGGAGATGAAAGAGGACTGTTAAGCCTTGCATTCCATCCCAATTACAAGAAAAATGGAAAGCTGTATGTGTCTTATACCACCAACCAAGAACGGTGGGCTATTGGACCTCATGATCACATCCTTAGGGTGGTAGAATACACAGTATCCAGGTATCAGTAGAAGTC-----------TAAAATTCACAAATTATGTATTTACCAGC-------AACCTTCCTCATTTTAGTATAGCCTGCTTCTAAAATGAACCACCAGATTTACAAAGCATATACTTGGGCAGTTGCAGAATATTTA--------TTGCTG--------ATATTTATTTCAAACAGTAGTTTTGGAACACCAGTCAGTATACTGATTTATTTGTTTTAAGACTCTTTCTTCCTATTTGTTCTGTTAT-TTTCAAATTATATTTATTTCCTACTTGTGTA---TGGGAAGCAAAATAATTTTTTGAGAATGCTGGAAAATTGCA----------ATTTCTCAGAAATTATTGTTTGACA----TTTTTATACCCAGTTACAACATCCTCATCTTAAAGTATGATTTGAATGACTCACATTTATTTTTAGAATGAAAGCCAATGATAGTGAGCTGTGAAAACTGTTTTCATATCTTTGCATTGCAGGAAAAATCCACAACAAGTTGATATAAGAACAGCCAGAGTGTTTTTAGAAGTAGCAGAACTACATCGAAAACATCTAGGAGGGCAGCTTCTGTTTGGCCCAGATGGCTTCTTATACGTTTTCCTTGGAGATGGCATGATTACCCTCGACGATATGGAAGAAATGGATGGTTTAAGGTACAAAAGCCACCAGTGGATAGACTTTGGAGTCACACTCAAAATTGACTAACAGT-----TGTCAGCAAAAATACTTTTCACGCTTCCTTAATTATATCACCTCACTATTTTCAGCACCTGAATTAAGCAAACAGTTAACTTTCAGAACAATCTTGTTACTTAGAGAC-------TTGTTGTAGGTGTTTGCTATCAAACACCTGTAAATATTGAAGTCCTCACTAGCG---TATCTAATTCTATTTAAACAAAGATTAGGCATATTTTTTTCCAGACTATTATTCTA-------------TCAACAAGACAGCTTTATTGAGCA--AATGTTCCAACAGACACATACCAGAGTCAATAACAACACTGTATCACTTAGG---AAAATGTCTAGAGAATGTATTTAGCA-----ATAGTGCTTTGGTTT-TGCTTACACAGTTTTCTCAAACAG-------------------------CTTTGACCCCATGACACTATGCTATAGAATCACATAATTGCTTGGTTGAGTTGGcagttcctctgtgatgagcagggacacctttaacaggatcaggctgcccaaagccccatccTATGTCAGAACTGCAAAATGTTGGCCCAAAGTTTGCTTTAATTTAGAGAAAGAGTAGTACTGAGCCTTTACAGACCTGAAAGGAGTTACTCTACTCAAAGGCCTCTTTGGCTCCATGGAATAACAGGTGCTCCTGACTTACAGAGAGGATATGCTTAACACCAAGACAAGAGAGCAGTGCTTGTACTTTATTTTAAATTAATATAGAATATGAGAGAGATTGAAACAGATACTGTGATAAAGAAAGTTGTTTTTGTTACCAAGTTGCTACTCAGCAGAGTGGTCAGAAGAGTTCTGCTGTAGACAT--AACAATGAGACATATTAACCAAAATGAATCTTCAGTGAGTTCT---ACTACAGTTCTTAAGACTCACACATGCTGTAAAACCAAACCA----GATGTGATTATTAAGTAAAGTAGGTGGTTTCTTTTACTGGTCATTGTAGC---------------ATTATATGCAAAATACTT-------TTAAAAAACAATTATTTTATCCTCCAACTTTCTCAGTGATTTTACAGGTTCTGTATTACGCCTCGATGTAAATACTGACCTGTGCAGTGTCCCTTATTCCATACCACGGAGCAACCCACATTTTAATAGCACAAACCAACCTCCTGAAATTTTTGCACACGGACTCCACAATCCAGGCCGGTAAGCACA ..:..x.....xx.:..........:x....:xx.-.x.x.xx.....:.:..:.:x.x:....---------::...::....-------:....:.:.xx:.xx.::........x...............::x...------------------------------------......-----------------------------------------------.::..x.x....:...------..x...x.x..x......:x:x.........-..::xx:x.:...:x.::..x.x-.........:.........----------......................x.................x.x...............:.................................................................:.......xx:.....................x.............x:.....:.......::...............:....:...:....................:.x.......:................x.....:..x.:..xx...-......................:x......:.....:....xx.....:..........:...::....................--.............x.......................-..............x.-.....::...x...:...x..................x..........---x:.:....xx........:..x..........................:....................................................:.......:.................................:..........:.............................:..:........:.....:........x..:.......................x..:...x.-----------x...x...x..xx....x.x:.:.:..x.-------..x:..::.:....x::x:.x..---------....:.::x...------.:..:.:---------....:.x::x:...xx...--------......--------....x.:.:.:x..x..-.:x.xx:.....x..:-----------------.x.....:.x.:.:..:.-----------..x:....-.:....x...x.xx------....:.x..x.---...:..::..x:.:.....::::x...x::x.xx.::.x..----------..x.:..xxx.x...:.:.x..x..----...x.x.x::..x...:.xxx.x:...::.----------.:...xx......:x..x.x.:..xx..-------..:.x..:..-----------.:.......---.:::::..x..:..:...........x.........x.:..............x...:.x.....x........x..:x....:.....:.....:..:..x..x........x..:.....:..:...:.:x.:.....x.....x........x..x..:....................x........-...:..::x:x:::...--------.:..:x.x.....::..:.--..:...-----..:...x.:...x:x.xxx...------------------------------...----.........-----.:::.x....--...:::..x:x..:x...:.x..-------....::.x:....:...xx.:.x:-------....:xx..:.xx:......:::---..:x.:..::.x.x.xx::x.x..xx..:xx..:.x..x.x:..x::x:.:...:.-------------..x....::.------.:....x.--.:..x:..x::.x.xx.....-----.xxx.xx.........:.x.--....---.x.x:.:.:..x...:x.x::.:.x.-----.x.:.:.x.x.....-x...x...x.:x..xxxx:.....-------------------------:x:...:x...::::x..xx..:.:--x......:.:.xx.......x....----.:.:x....x:.:.-..xx:.x:x.x...xx..x:..x...---------:x:::..::...x.x.xx.:.x.-----------------...::..--...:...x..:.xx.x::x..:xxx..---...:..x.x.x.x..:x:.x.:.-.:.x:.x:.x..x.....:..------------x:.:....:x:.xx...---...x:..:.::.xx..x.x..xx.x.x.--------.:x:.:........x.--------x.x.x:x......x..:x.-----------------------------.::.:.x.....-------...:x...:.-------..xx:..x.x.:...--......----.x.x.:.x.:x::------....xxx:...x..---.:.....------------..:::x..:::x:x.:.x.:...----:..:.xx.xx..x.::x...x:.:..:...:..:-----:...x.:x...---------------.x....x.::.....:x.-------x.:x......xx..:.:.:...:....-..............:.....:..x..::....x..x.....::.:..x...x......::..x...............x.............:..:..:.....x.....:..:..:...:.x.....x..:..:......:........x...:..x... 35M1D28M9I11M7I48M36D6M47D16M6I31M1I23M1D19M10I278M1I85M2D37M1D16M1D48M3D247M11D29M7D23M9I12M6I7M9I19M8D6M8D17M1I16M17I18M11I8M1D14M6I11M3D41M10D25M4D30M10I28M7I10M11I9M3I191M1I17M8I19M2I6M5D22M30I3M4I9M5I10M2I23M7D24M7I23M3D56M13D10M6I8M2D21M5I20M2I4M3D26M5D15M1D24M25D25M2I25M4I14M1I26M9I23M17I7M2I27M3I23M1I21M12I17M3I28M8I16M8I19M29I12M7I10M7I15M2D6M4I13M6I14M3D7M12I23M4D34M5I11M15D18M7D27M1I161M 1747/2404 72.7% 2741/94230402 0.0% 576/2404 24.0% 112686417 77528138 +8784 chr4 + 190214555 144711937 144711936 144712077 141 TCTTGTTATGCAGATGTGCTGTGGATAGACATCCCACTGATATAAACATCAATTTAACGATACTGTGTTCAGACTCCAATGGAAAAAACAGATCATCAGCCAGAATTCTACAGATAATAAAGGGGAAAGATTATGGTATGT chr4 + 94230402 32022867 32022866 32023006 32022867 32022866 32023006 140 TTTTGTTTTA-AGATGTGCTGTGGATCACCACCCAGCAGATGTAAACATCAATTTAACAATACTTTGCTCAGATTCAAATGGAAAGAACAGATCTTCAGCAAGAATCTTACAGATAATAAAGGGTAAAGACTATGGTAAGT .:.....x.:-...............x:x..:..x:.x...:................:.....x..:.....:..x........:........x.....x.....::................x.....:.......x.. 10M1D130M 116/140 82.9% 140/94230402 0.0% 1/140 0.7% 112689070 77525485 +10561 chr4 + 190214555 144714181 144714180 144714394 214 ATGAAAATATG---TTTCATTTGATCTAATGCTATG----TTTCTTTCCAGAAAGTGAGCCATCACTTTTAGAATTCAAGCCATTCAGTAATGGTCCTTTGGTTGGTGGATTTGTATACCGGGGCTGCCAGTCAGAAAGATTGTATGGAAGCTACGTGTTTGGAGATCGTAATGGGTAGGTTTCCTGATACCACAACAGTATGATATACCAAATGACATAT chr4 + 94230402 32024940 32024939 32025157 32024940 32024939 32025157 218 ATCAAAACATGAAACTGCATATGATCTAACAATATGGTAGTTCCTTTTTAGAAAGTGAGCCTTCACTTTTAGAATTCAAACCATTCAGCAGTGGAGCGTTGGTCGGTGGATTTGTCTATCGAGGTTGCCAGTCTGAAAGGCTCTACGGAAGTTATGTATTTGGAGACCGCAATGGGTAAGTTTCT---TATAATTTCAGCCTTAAACATAAAATGAGGTAT ..x....:...---:.x...x........::x....----..:....::............x.................:........:.:...xx.x.....:...........x..:..:..:........x.....::.x..:.....:..:..:........:..:........:.....:---..:x.:xx...:x.x.x.:.:x......x:... 11M3I22M4I145M3D33M 162/211 76.8% 218/94230402 0.0% 10/211 4.7% 112689241 77525314 +8610 chr4 + 190214555 144715275 144715274 144715433 159 GCTTTATGGTATGTTTCTGT-TGTAGGAATTTCCTAACTCTCCAGCAAAGTCCTGTGACAAAGCAGTGGCAAGAAAAACCACTCTGTCTCGGCACTAGTGGGTCCTGTAGAGGCTACTTTTCCGGTCACATCTTGGGATTTGGAGAAGATGAACTAGGTA chr4 + 94230402 32025746 32025745 32025902 32025746 32025745 32025902 157 GCTTTCTG---TGTCTTTGAATATAGAAATTTTTTAACGCTGCAACAGAATCCTGCAACTAAACAGTGGCAAGAGAAACCCCTCTGTCTTGGCAACAGCGGTTCATGTAGAGGTTTCTTTTCAGGCCCTGTCTTGGGATTTGGTGAAGATGAACTAGGTA .....x..---...:.:..x-.:...:.....::....x..x..:..:.:.....::..x..:...........:.....x........:....x:..:..x..x........:.x......x..:.x::.............x................ 8M3D9M1I139M 123/156 78.8% 157/94230402 0.0% 4/156 2.6% 112689529 77525026 +7723 chr4 + 190214555 144718857 144718856 144718961 105 TATTTCTTTCTTTAACAGGTGAAGTTTACATTTTATCAAGCAGTAAAAGTATGACCCAGACTCACAATGGAAAACTCTACAAAATTGTAGATCCCAAAAGGTGAG chr4 + 94230402 32026425 32026424 32026529 32026425 32026424 32026529 105 TATTGATTTCTTTAACAGGCGAGATTTACATATTATCAAGCAGTAAAAGTATGACACAGACTCACAATGGAAAACTCTACAAGATCATTGACCCAAAAAGGTGAG ....xx.............:..::.......x.......................x..........................:..::.x..:..x.......... 105M 92/105 87.6% 105/94230402 0.0% 0/105 0.0% 112692432 77522123 +8886 chr4 + 190214555 144720331 144720330 144720794 464 ATTTCACTCAGATATAATACAATTAGTTTCAAAACAGACATTGTT--ATTCTGTTATACTGTCTCAGTCTATGTGTTTT-TGCAAAGTACCTGGTAGCATTGTAATGGATTCTCTCTCCTTCTCACAAAAATCTTTCTCTCTTCATCTGGATTGTTTAGTCTG----TGGCTGAGTTTAGGTGCATTTTACACCTTCAATCTATTATTAGTGTCTAATTAC-CAAGGTTGCCATAAGGGACCTTGGCTTTGTGATCTTAGT-TCTCCTCTAGTAGGGTGGTCTCAGAGTGACATACCTG-AAGGCCTGACTTCTCATTATGGTGCCTGTTTCTGGTGAGTCATGTCATGTGGGGGGCCCGGGTTAAGATTTGTGTTTGCTTTTCAGAAGGTGGGGGAAGTAG-CAGAGTCCCAAAGAAACCGTCCTTGTACACAGACATGAGCATAAATTTCAAAATTAAACTGACTATAAGAAA chr4 + 94230402 32028135 32028134 32028578 32028135 32028134 32028578 444 ATGCTACCCAAATCTATGGCAACTAATTTGGAAGCAGATGCTACTGCAGTCTGTCAGTCAAGGCTATTATGGATGTTTTATTTATGCTTTCTGGTATTA----AAAATATTTT------TTTTAGAACAAAACTTGCCATTCTTATTGGGATTGTTTAGACTGATGGTGTATGGTTTTAAGTGAATTTTACACCCTAAATCCACTATTAGTATCTAATTACATGGGGCTGCCTTGTTTGACCTCGGCTTTTTGTTCTCGTTACCTCTTCCAGTAGGGTGGTCTTCAGCTGACATACCTGAAAGGCCAGACCTCCCATTGCTGCACTCACGTTTGGC---TGTTTTCATGTATGGAAAAC-GGTCAAGA-CTGTGTTTGGTTAC-------TGGTGAAAGTAACCAGAAAACTATAAAATACTTC--TGTAAATTGGCACGCG-------TTTGAGACTAAACAGACTATGGCAAA ..x::..:..:..x..xx:...:..:...x:..:....:::.::.--.x.....:.xx.x:xx::.x.x.:x:......-.x:.x:x.x:......x:.----..x:x...:.------..:.x:x.x...x...x.:x.::.:..:x...........x...----..xx..:x....:...x..........:.x....:.:.......:.........-:::..:....x.:xxx.....:......x..x...::x.-:...:..:.............:x::x...........-......x...:..:....::x.::.::::x.:...:---.xx.x......:x..::xx.-...:....-:........x..x:-------...x.:.....:-....:xx.:.x.:..xx.x..--....x.:x.:..:.x.-------..::.:.:.....x......::x... 45M2I32M1I19M4D10M6D44M4I54M1I39M1I37M1I36M3D20M1D8M1D14M7D12M1I21M2D16M7D26M 282/433 65.1% 444/94230402 0.0% 42/433 9.7% 112692196 77522359 +30733 chr4 + 190214555 144723184 144723183 144723894 711 ATATCATTTATCTGTTACCCAACCAAGTCACACAG--ACCATTCCCTTAATAAGT-CTATAAATTAATAA--------TGCAAATTCCAGGCTCGAGAGGT-CATTTTACATACATGTTGTATCCCCAATCTCCTCTGTGACCA--ATATCAAAAACTGCCCCTCATTCCTCTTCCCCCCATGGCCCACTTACTGC-----CCTTTGTCT---------ATTGTTTTCTTAATATCTTCATCCTACT---TCTTATTAG-ACTGGATGCTAAAGAGTGCT---TTTTTCAAAAAAATCACTTCATAAGAGGAAACCAGTTCTGTTTATCCTTTGCATATATCTCAGGGAGCCAGCAGGCAGC-TCTGCCATCCTAAAGAAAGTTACACATAATAGAGCAGCTTTAGCCCAATAAGCCAGTCTAGTCCCAATTCATCAGCCAAAGTTTTATGCAAGTGGCCCCCCTAAGTTGATAAATTCCCACAGTGCCTGTTGACCCAGCTGCCAAGTCCTCTTGCAGCAGGTGGTGTTTTCATGGCCACCCTGACAGTAATACAAACTGTTTAGCAGCTCCATTGACCTTTCAGCTATTAACAGGGATACAGGCTCCACTAGGGACTAGTTTTCAAACATGACAGAATTTCTTAACACTAGAGGTCATGAACAAGTATATGCCCTATAAAAGTCCATTCAGCATGGTG--GATTTGAAGTCTAAGAGGCAAGGAAACATTTTCCACATTTTTGCTAT chr4 + 94230402 32031652 32031651 32032370 32031652 32031651 32032370 719 ATCTCATTTACCT---ACCCA-------CATGCAGTTACTATTCCCATAAGAGACACTAAAGAGAAATTAGAGCTTTTTGCGAATACCAGTCTAGAGAGTTTCACTTTACAGAAGTACTTGA--CAAAAACTCCTTTGTAACCACGATGGAAAAACCTAAGGATTTTTTTCAATCACATCACAGCTCACTGACTGTAAAAGTTTTTGTTTTGGTTTGGGATTTTTTTTTT----TTTTCATTTTTCTAAGTCTTTCTAGTGTTGGCTATTAGGGAATTCTCACTTTTT-------ATCACTTTATAAGGCAAAACCAGCTCCGTTTATCTTCTGCTTATTTTCT--GGAGCCTGCAGGAAGCCTCTGCCATCCTAAAGAAAGTCATACATAATAGAGCAGCTTTAGCCCAGTAAGCCAGTCT-TTCCCAATTCATCAGTCAAAGTGTTATGCAAGTGGCCCCC-TAAATTGATAAATTCCCACAGTGCCTGTTGACCCAGCTGCCAAGTGCTCATGCAGCAGGTGTTGTTTTCATGACCACCCTGACAGTAATACAAACTGTTTAGCAGTTGCATTGACCTCTTAGCTATTAACATTGATACAGGCTTCACTGGGGACTAGTTCTCAAACATGACAGAATTTCTTAAGACTAGAGGTCATGAACAAGTATA--CCATATAAGAATAAATTTGATATGCTGCTGAGTTTAAATCTTAAAAGC-TGCGAGTTTTTTCCACATTATTCCCAT ..x.......:..---.....-------..::...--..:......x...x.:::-...x.:.xx...x.--------...:...x....x..x.....x.-..:......x.x:.::.xx.--.xx..x.....:...:....--..:xx....x..:xxxx.:x..:::xx..x.x:..::..:....x....:-----::.....:.---------...x....:..----.:.....::.x..---....x:...-::...x.::..::..:.x..---.....-------.......:.....:x:.......:..:.......:.:...x...x.:::--......x.....x...-....................:.:........................:...........-x..............:......x.................-...:.........................................x...x...........x..........:................................:.x.........:.:...........xx..........:....:..........:.......................x.......................--..x.....:.:.xx...::::...x..--..x..x..:...x.:.:..-x.x:.::x...........x..x.:.. 13M3D5M7D7M2I18M1I14M8I23M1I20M2D20M2I50M5I9M9I11M4D13M3I9M1I20M3I5M7D49M2D16M1I59M1D40M1D207M2D27M2I19M1D27M 543/681 79.7% 719/94230402 0.0% 68/681 10.0% 112691532 77523023 +3120 chr4 + 190214555 144724466 144724465 144724533 68 TCTAAACTTTTAATTTTTCCCCAACTTTAAGATATAATTGACAAATAAGAATTGCATATATTTACAGT chr4 + 94230402 21431769 21431768 21431836 21431769 21431768 21431836 68 TTTGGGTTTTTTATTTTTCCCCAACTTTAAAATTTAATGTAAGGATAAGGAACAAATGTATTTTCAGT .:.::::....x..................:..x....xx.x::.....:.x::x..:.....x.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 123292697 66921858 +3180 chr4 + 190214555 144724640 144724639 144724710 71 GTCTTCTTTTGTGTGTGTGTGTGTGTGTGTATATATATATATTTATATATATATATAAGTA----TATATATATG chr4 + 94230402 83657504 83657503 83657578 83657504 83657503 83657578 75 GCCTTGTATGATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAAATGCTATGGATATG .:...x.x.x:...x...x........::...........x.:.x.........x....x.----...:x..... 61M4I10M 55/71 77.5% 75/94230402 0.0% 4/71 5.6% 61067136 NA +3554 chr4 + 190214555 144724643 144724642 144724742 100 TTCTTTTGTGTGTGTGTGTGTGTGTGTATAT----------ATATATATTTATATATATATATAAGTATATATATATGTATG----------TATGCATATATATATATATATCCCATTT chr4 + 94230402 85834535 85834534 85834654 85834535 85834534 85834654 120 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTCCACTT ...x.......x...............:...----------...:....x..x...:..:.x..x.:.:.:...:.:::...----------.x.x.x.x.:...:..:.x..:...:.. 31M10I41M10I28M 73/100 73.0% 120/94230402 0.0% 20/100 20.0% 58890108 NA +3075 chr4 + 190214555 144724650 144724649 144724697 48 GTGTGTGTGTGTGTGTGTGTATATATATATATTTATATATATATATAA chr4 + 94230402 55892185 55892184 55892232 55892185 55892184 55892232 48 GTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATAA ......x...:.:.x.....x......:........:..:...:.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 88832465 NA +3564 chr4 + 190214555 144724651 144724650 144724725 75 TGTGTGTGTGTGTGTGTGTATATATATATATTTATATATATATATAAGTATATATATATGTATGTATGCATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.............:.:...xx..:.xx::...:....:...:..:..:.x....:.:::..:..:.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 58890110 NA +3003 chr4 + 190214555 144724653 144724652 144724695 43 TGTGTGTGTGTGTGTGTATATATATATATTTATATATATATAT chr4 + 94230402 83657515 83657514 83657557 83657515 83657514 83657557 43 TGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATAT ...x...x........:..............x.x......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 61067138 NA +9906 chr4 + 190214555 144734715 144734714 144734897 183 CTTTCAACTAT------------TGTGTTTTAATGTAGACCTTTAATGCCTGAGGAATGCAGAGCCACGGTACAACCTGCACAGACACTGACTTCAGAGTGCTCCAGGCTCTGTCGAAACGGCTACTGCACCCCCACGGGAAAGTGCTGCTGCAGTCCAGGCTGGGAGGGGGACTTCTGCAGAACTGGTTAGTAT chr4 + 94230402 32037440 32037439 32037634 32037440 32037439 32037634 195 CTTTTAATTATATGCTTGGTTCATATGCCTTCATACAGGCCTTTAGTTCCTGAAGAATGCAAAAGAACAGCTCGGTCGGCACAGATACTGACATCTGAATGCTCAAGGCACTGCCGGAATGGGCACTGCACTCCCACAGGAAAATGCTGCTGTAATCAAGGCTGGGAAGGAGAGTTCTGCAGAACTGGTTTGTAT ....:..:...------------.:..::..x..::..:......:.x.....:.......:.:xx..:.:x.:::.x.......:......x..x..:.....x....x...:..:..:..x:.......:.....:.....:........:.:..x.........:..:..x................x.... 11M12I172M 139/183 76.0% 195/94230402 0.0% 12/183 6.6% 112697275 77517280 +98626 chr4 + 190214555 144737726 144737725 144740143 2418 AATGAGAGTGTGATGTTCTTGCTCTTTTTCTCTCCCAGCAAAATGTGAGCCAGCATGTCGTCATGGAGGTGTCTGTGTTAGACCGAACAAGTGCCTCTGTAAAAAAGGATATCTTGGTCCTCAATGTGAACAAGTGGACAGAAACATCCGCAGAGTGACCAGGGCAGGTATTCTTGATCAGATCATTGACATGACATCTTACTTGCTGGATCTAACAAGTTACATTGTATAGTTTCTGGGACTGTTTGAATATTCTA-TTCCAATGGGCATTTATTTTTTATCCTGTCATTAAAAAAAAAAGACTGTTATCCTGCTACACACTCCTGTGATTTCATTCTCTTTTATTAATTTAAAAATAATTTCCAGAAATGTGCAGAT----CCTCTGTGTGTATGTCAGCATGTTTGTTCACATATGCACATACACATACTCATAACCCCTATATGCGTT-GTTGCATAACAGATGATTTTTTAAA------------------ATATATACTTCCTTATGCAAAGTAATTTACACAGAAATTCCATTGTAAA--------TTGATAATGGATTTTTTATGTTACTAGAAGAGATTATTTGACTTCCCAGGAATTTTCTGTCTGTAA-TCACTAAAGTCAACTTTAATAGAG---TTTTGAAACAGTACTGTGCAATCCGATGGATCTAATTAAAAAAAAGGCAATATTTTTATATTAAAGT--ACTATACTAGGAGAGAATGTTTCAGAACTCCCTGATGAATTTCTAAGTGAGCAACTTGATATAAAATTGTAATCTTCATTTTTGTCAGTGTATC-CAGTTACAGAATGCTACACACTTACCTTTTTA---TTGGCTGAGAAATCTGGTTATTTCATCTTAATCTCAAGATTGTTTTCAAGTGTTTTATAATTAAATCATAATAGCATATTTTAAAATCAATCTTCCTAAAAGGTCTGCTTT-TATTGTATATTTTATTTAACAATAGGCACTGGGTTTGTGTTACATATTTATAT-ATTTTATTTTATTTTTATAATATAGACATCACCTAGATGAAACACCTTTACCCTGTCCTGTAAAACACTAAAGTTACATTTTTCACCAACTTAATTGGAAAGAAGGGGAGTGAGAAAGCAAACAGTC--TTTAATGTGCTGTGGATCTAATCTAGCAAGGTATCCTTGTGCCAACATGTAATCATTAACGACGGATGAAAAAGCAAGAA--AACAGCCAATCCTTATAAAATTCCAGCATT------AAACATTTGTAAAGTGCTTTTCACCATAGCAAGACTG-TCAGAGTCTATGTTATTAGAATGTTGCAGATTTC-CACTGAATCGAACCTCACTGGAGAAGAGCTCACTTGTTTTTAAAAATCTTGGCTATGTAAGCTGTCACCTGTACAAATTTTTAACATAATAATTCTTGCCAAATATGACTTTAAATGTACGTGTT-CCTTCAGAACTCA-ATGAAAATACTCTTTGGCTAATGTATCAATAAATTTTCTGTAAATGTTCTGTTCAGGGTTTTACAGAGATGA----------------CATGTTCTGACTTAA----------AACTGCAAAAAGTC--TAGTAGATATTTTTCTTCATGGTTTTCA-------AAGCCAGCTCTCCACGTTTGGATTTTAACAAAATATAAGGCCTCTTTGCACTAGTGAAAA--AACACGTCTACT--CATGACAAGTGCACACCCACTATGGCTGTCCTTCTTCTGTAAACATCCATTCCTCTAGAATCTAAATTGTAGAGCAGTATAGATTATGCAGCGCCAGCTGACTTTCTAAACCTTCTCCTTACCTTTAGGAATACAAGCCTCAATTTAAAA-AATATATTGTAGCTAGTATTTCTCTATTG-----------TTTTAAGGTGAGAGATTTGCAATTA--AAGCCCAGTAA-----------GCATTTAT----ATAGAAGCCACAATGTAGAAAGATTGGTTAAGTACACTGCTCTTGTCTTCCATATATGATTACTTAAGTTTCAAGTGACCTCATGCCAAATGGAAATGGGTTGAGAAATCTTGGTTCAGTGCTTAGTGAACAATAGCCTGCATTAAAAAGTGCATGCATAATTTTGCACAATTTAGATTCAATTGACAGTCTATTCAAAGAAGTCTCAGGATTAAATGAGCATGGAGACCAAATTGCCCTCTTACCCCAGAAAAGGGGTGGTCCCTTCTAGTCACACTAACACTTCATTGGCCCAACAGTGTGACAAATCTTGCAATGAACCATGCAGTAGCCTGCATCTGTAGGTTAATAGCAATCTTTTGTCTCCATTGCTTTCTCTTCATAGCCCTTTTACTGAATTCCATCACAGAAAGTTTTACAATTAAAAAAAAATGTCCTGACAACCATTTTTGTAAATGGACCTTACCATCTAATTGTCCCTTATTCAACGTGGGTGACATTAACAAAATGTGAACTTCTTGTGAGGGAGCCAGCTGTCTAAATCTGTCAAATCGTGCAGTTTTATTACACATTCTCCAAT chr4 + 94230402 32039159 32039158 32041613 32039159 32039158 32041613 2455 AATGAGAAAAT--TGTTCTTTCTTTTTACC---CACAGCAAAGTGTGACCCAGCATGTCGACATGGAGGTGTCTGTGTAAGGCCTAATAAATGCTTATGTAAAAAAGGCTATCTTGGCCCCCAGTGTGAACAAGTGGATAGAAACATCCGAAGAGTTACAAGGCCAGGTATTCTTGATCAGATCCTAGACATGACATCCTACTTGCTGGATCTAACCAGCTATATTGTATAGTTTTGGGGACTGTTTGGAAACTACACTTTCAACGGGCATTTGTTTTGAATCCTATCATTTTTTAAA---GACTGTTATCCTGCAACAAATACCAGTGATTTGATTTACttt-attaatttaaatataatatCCAGAAATGTGCAGATAAATTCATTGTGTATGTGTTAATATTTCTGTACATCTCCGTAGATGTACAGATACCCAACACATATATGGGCAAGCAGTATCACAAATACGGTTTTAAAGCTAGTGGAATTTTTTTTATATGTATTTCTTCATGAGAAATAGTTTACACAGCAATTCCACTGCAAAACACATTTTCTTTTAAGGACTTTTC-CGATGTCATAATGGATTCACTGATATCCCAGAAACCTTGTGTCTGCAACTGGATAATTATAGCAATAAGAGAGCAGTTTTGAACCATCACCAGATAAACTGCTGGACTTAATGAAATCCAGTTGTAAGTTTTTAAGGTGAAATGAACTACGTTATGAGACAATATTTCAGAACTGCTTTATGCATTCCTGTCTAGGCAATTCATTGTAAGACTGTAATCTTCACCTTCATCAATGTAACTCTATTACAGACTGTTACGTATTTCCTTATCTAGCATAGATGCAAAAATCTGGTTATCGCAGCTTGATATCAGGATTGTTT-CATGTGTTTAATAATTAAATTATACTCACATATTTCAAAACCAGTCATCCTAGAAGGTCTGCTTTCTATCATGTATTTTATTTAACAATGGGCACTGGGTTCATCTTACatatttatattattttattttatttttataatataGACATCACTTAGATGAGACAGCTTTACCATGTCCTGTAAAATACTAATGTTACATTTTTCACCAATTTAATTGGAAAGATGGGGAAAGAAAGAGCAAACACACACTTTAATGTATTGCGGATCT-----------GTATCCTTGTGTCAACTTGTATTCATTTCCAATGGATGAAAAAAAAAAAACCACCAACCAAACATATTAAAATTCCAACATATATTAAAAGTGTTCATAAAATGATTATCACTATAACAGGACAGACCAGATTATACACAACTAGACTGCTACAGATTTCATACTGAATGGAACTTCACTGGATGAAAGCTCACAT----TAGCAGTTGCTGGCTGTGTAAGATGTCACTTGTATAAAACGT----ATAACAATTATTGCCAAATATGGTTTTAAATGTAAATGTTTCCTGAAGAGCTAACATAAAATTGATTTTTTGTAAATGTATCAATAAATATGGTGTACATGCTATAGTCAGGTTTTTGAAAGTATTAATATTTTAATCAGATATATCTTCTGAATTGGTGCCCTCTCTGACTCTGGGAAGTTATTGGCAGTT-TCTTTGTTCATTGTTTGCTGGCTATTAGATTTCCTTTGCACTATCTGGCTTTTATAAAAT----------CTTGCACATATAAAGAGTAGCATGGCCACCACCATG---------CACACACTAATGGT-------TCCTATAAGCAGCTACTTAT-----GTCAACAGTTTACAACACTTCAG-----GCAATAACATCTAGCTTACTGTAACTG-TATTGCTCTCCAGTAGCAAAATTCTCTTTGCAGGACAGTGACATGTAACAACTTTTCCTTTATGGAACGTTGTCAGTCTTGATTTAATAAACAGTAAATTTTTAAGCACATTAAAAATGTTATTTGCATTTATCTTAATAAGTATCCTAGCTAAGAGAAAC------AGAAAATTACACTTGCCCTCCATATATGTTTGCTTGAGTTTCAAGTGACCTCATGCCAAATGGAAATTGGTTGAGAAATCTTGGTTAAGTGCTTAGAGAACAATAGTCTGCATTAAAAAGTGCATGCATAATTTTGCACAATGTAGATTCAACTGACAGTCCATTGAAAGACATCTCAGGATTAAATGAGCATGAAGACCGAATTGCCCTCTCACCCC--AAAAAGGGTGGTCCCTTATAGTTACACTAACACTTCATTGGCTAAGCAGTGTGACCAATCTGAAAATGAACCCTGCAGTA----GCATCTGTAGGTTAATAGCAGCTCTTTGTCTCCACTGCTTTCTGCCTTTAGTCTTTTTCCCGAATTCCATCACAAAAAGTTTTACAATT----AAAAATGTCCTGACAACCATTTTTGTAAATTGACCTTACCATCTAATCTTTCCTTATTCAACGTGGGTGACA-----AAAATGTGAACTTCTCATGAATGAGCCAGCTGTCTAAATCTGTCAGATAGTGCAGTTTTATTGCACTCTTCATAAT .......:x:.--.......x..:...x:.---.x.......:.....x...........x.................x..:..x..:..:...:.x...........x........:..:..:..............:...........x.....x..x...x....................x.x...........:.................x..:..:............:x...........:.x.:.x:.-..:...:........:....xx.....:.....xxxx...---..............x...x.:x..x.......x...:x....-...........x.....x.................----:.x:.....:.:...:.::..x.:...x..:x.x:.:.x..::...x.:x.x:...x.x......x.:x-.:x.:..x...:..:xxx.......------------------....:..:...:.:...x:..:..:.........x.......:..:...--------.:xx.x.x...:....:-:.x.:::.x..x:....xx:...:x......:..::..x......:..-.x:x...xxx:.:.xx...x....---.......x..x:..::x::..x.:.x....::....x...xxx.:xxxx.x:......x:x.:..:.--....:::..x....x...:..........x.:.x...x...:..:xx.::....:.::x.:...:.:...........::..::...:....x.-.x:.......x..:...::.:..x.:.x.:..---.x.::xx.:............:x..x...:..x...:........-..x......x..........:...x.x:.......:....:..:..x.....:............-...::.:................:...........::.x..............-................................:.......:...x.......x............:.....x.................:.............x.....:x..:.:........xx.--........::..:......-----------...........:....x....x.....xx.:.:..........:x..:..--.x..:....x.x.xx..........:...x------..:::..::....:..x..x....:...:..:...x.-:....x.x..:::x.:....x..:.:........-:.......x....:........x:.:.......x.----.x:x.:x.x:.....:......x......:....:...x:x.----....:....x............::..........x:....-...xx...:..x.-..:...x.:x.:...x.:x...............x.xx....x...:.x.:x.....x....:x.::x..x.----------------:..x......x..::----------:...x::::....:--.:.:..x.-.:...x.....x....x.x-------.::::xx..:.x...xx.:x.::...x.:.....----------:......xx:.:..:.--.:..:.x.:..:--....---------...x.....xx.x.-------.:..:...:..x.:.:.:x.-----:..x.x.x.x..x.:..x.x:..-----...:::x..x..::...x..:x.x..x-.x:.xx:..::..x.::.x..x:...xx.x:.::.-.:.:xxx....:.x.x.x..:..:...x.-----------.:..:.xx.:.x.:.:xxxx....x--....x..x...-----------........----...::x::.x:.::xx...:.:.:------..x.x.:.:.x....:.:..........x..:...:...............................x..................x.........x.........:...................................x.........:........:...x.....x:.....................:.....:...........:.....--....:............x....:...................:x.:.........x.....x:x........x.......----....................::::..........:........x:::x...:.:....x.:.............:..............----..............................x................:x.:.....................-----...............::...:x.......................:..x.............:...x:.::x:... 11M2D17M3D224M1I40M3D42M1D35M4I69M1I25M18I49M8I17M1D48M1I24M3I67M2I94M1I32M3I45M1D65M1I53M1I127M2I19M11D50M2I30M6I37M1I34M1I35M4D42M4D40M1I13M1I72M16I15M10I14M2I8M1D19M7I34M10D16M2I12M2I4M9D14M7D20M5D23M5D27M1D35M1I29M11I25M2I11M11I8M4I24M6D218M2D80M4D89M4D72M5D76M 1766/2329 75.8% 2455/94230402 0.0% 215/2329 9.2% 112698567 77515988 +3034 chr4 + 190214555 144742018 144742017 144742082 65 AATATATATGTGTATGTGTATATATATATGTATGTATATATATACACACACACACACACATACAT chr4 + 94230402 25664000 25663999 25664064 25664000 25663999 25664064 65 AACATATATGCCAATGTTTATATTAATATGTATTTTGAGATACATGCACATGGACACACATACAT ..:.......:xx....x.....xx........x.xx.x...:.::....::x............ 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 119078018 71136537 +3477 chr4 + 190214555 144742028 144742027 144742098 71 TGTATGTGTATATATATATGTATGTATATATATACACACACACACACACA-------------TACATACATACATACATATAT chr4 + 94230402 23247723 23247722 23247806 23247723 23247722 23247806 84 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ...:...:.::.:.:.:..x....x.:....:........:.........-------------.....:x...x...:...... 50M13I21M 55/71 77.5% 84/94230402 0.0% 13/71 18.3% 121494305 68720250 +3094 chr4 + 190214555 144742031 144742030 144742091 61 ATGTGTATATATATATGTATGTATATATATACACACACACACACACATACATACATACATA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...x:.....x.:...:..........:::..::.....x....x...::...x:....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 83471256 NA +3008 chr4 + 190214555 144742050 144742049 144742101 52 TGTATATATATACACACACACACACACATACATACATACATACATATATTCT chr4 + 94230402 89823932 89823931 89823983 89823932 89823931 89823983 52 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCT .:.....:x...................:x:...xx..:...:.::...... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 54918118 NA +20904 chr4 + 190214555 144744963 144744962 144745335 373 AACACTACATATGTATACACACTATCTATGTAAAATATAATATATGTATAATGCATATAAATTCTAACAAGTGTATTTGTGTTATCTTTAA--AATAGAACAATTGTATCTTGAAGTGGTAAATGCAGAGAATTGGTTTTATTGTTGATCTGTGGATTTAATGATTTCTAGGTGAAAAGGACGTTTAAGTGTACAATTTCTTTTCTTAATTTAATATATTTATGTAAATGCATGCCTGAAATT-TGGTTAGATTGGCTGTGTTTTGTGTCTTTTAACATGATCAAATG-ATTAAACTTTATCTTATGACTTGATGTACATGTGCTATTTTAAAATTCTTTTTTATTTTAGAATTTAAAACTTTTTTCTAAATATACA chr4 + 94230402 32046767 32046766 32047131 32046767 32046766 32047131 365 AACATCATGTATGTATACACACTAT-TATGTAATATATAATATATGTATAATGCATATAAATTCTAACAAATGTATTTGTGTAATATCTAAGAAATTGAACAGTTGTATCTGGAAGTGATAAATGCATAGAGTTGGATTTATTGTTAATCTGTGGATTTAATGATTTTCTAGACAAAAGGACATTTAAGTGTATAATTGCTTTTCTTAATTTAATATATTTATGTAAATGCATGCCTGAAGTTCTGGATAGATAG---TTATTCTGTGTCCCTTAAGCTAATAAAATATATTAAACTTTATCCTATAATCTGAAGTATATGTGCTGCt------ttttttttctttttaatattttta--ttattactaaatacata ....::.::................-.......x....................................:...........x..x.:...--...x.....:........x......:........x...:....x.........:....................::x:.xx........:..........:....x.........................................:..-...x.....x.---x.:..:......::....xx.:..x....:-.............:...:.::...x...:.......::.------..:.....:x.....:x....xx.--..x..x.......:.:. 25M1D65M2I150M1I11M3D30M1I39M6D24M2D17M 303/361 83.9% 365/94230402 0.0% 16/361 4.4% 112698196 77516359 +3253 chr4 + 190214555 144751971 144751970 144752040 70 TGCACCTGTGGTCCCAGCTACATGGGAAGCTGAGGCAGGAAAATTGTTTGAACCCAGGAGGTCGAGGCTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .....x...:..:........x..::.:......x.xx.x:..x:::..........:..x.:x:..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 68718766 NA +3120 chr4 + 190214555 144757033 144757032 144757174 142 AAAAATCAAGGGAGAAAAGAGAAAAGGAAGAAAGGAGGGGAAATTGAGAGAGAAAAAGCAAAGAAGGAAGGAAGGAAAGAAAGTAGAAAGAAAGAGAAAGAAAAAAAAGAAGGTATGAAAGGAGGGAGGAAGACAGGAAAAA chr4 + 94230402 59372604 59372603 59372737 59372604 59372603 59372737 134 AATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATA--------ATAACAGGAAGAAATAACAAAGGGTAAA ..x...x..:...:...x:.x..x.:x..x:.:..:..x..::xx.::...:.....xx.x.:....:.::.x:.x..x...:x:.x...x..x.:..:.....x.--------..:.x....:.:.:x..x.x...:x... 106M8D28M 82/134 61.2% 134/94230402 0.0% 8/134 6.0% 85384429 NA +3272 chr4 + 190214555 144757079 144757078 144757143 65 AGAGAGAAAAAGCAAAGAAGGAAGGAAGGAAAGAAAGTAGAAAGAAAGAGAAAGAAAAAAAAGAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA .:..x...::...x.x:.......:::...:..:.::x.:...:................x:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 115742406 74472149 +3173 chr4 + 190214555 144759574 144759573 144759645 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACATAAACCCAGGAGGCTGAGCTTGGAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...xx..x.:.......:..x:.x:.x:..x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 68726368 NA +3064 chr4 + 190214555 144779523 144779522 144779578 56 CCTCTTTCCCTTCCTTCCTTTCCTTCCTTCTTTCCTTTCTTTCTTTTCTCCTCCTC chr4 + 94230402 25163663 25163662 25163718 25163663 25163662 25163718 56 CCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ..:x:.:..:..:.....:x...x..........:.....:..:..:.::....:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 119615860 70598695 +3025 chr4 + 190214555 144779527 144779526 144779566 40 TTTCCCTTCCTTCCTTTCCTTCCTTCTTTCCTTTCTTTCT chr4 + 94230402 37318514 37318513 37318553 37318514 37318513 37318553 40 TTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTCT ..........:.:.........:........:..::.... 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% 107461013 82753542 +28484 chr4 + 190214555 144779597 144779596 144780263 667 TTTTCTTCTTCCTCATTTTAAAATGTCAAAAGCTTCCTGACATGCTTTGGCCATGGAAATGGAACATATTTTCTCATTAGGTTAATTAATGGCTCTGCTTGGGTGGCACAATTCGGTGTAAGTTTCCTTTTAGAATTCTGTCATAACTAAAAAGGATCTTATTTTTGTTATGTTTTGTGGTGTCTTTAAATTTTTATGACTTCTACTTTGTTTAGTCTGTGTGTAATCCTTCTTTTGAAACCTAATGTCCTAGAAAATTTACAGTTTTCTCTCAAAACTGGCACTTTTTACATTTTACAGTAATTCCTGTTTCTTTAGTTTTCACTAGAACTTCATTTAAGTCCTTAAGGTGTAATTCGCAGCTCAGGGAATTTATGATTACATCGTCAAAGTAAACTCCCCAAGAGCAATATATTAAACCTGACAAGATGCTGTTCATTAATCTTTGAAATATGACCAGGTGTGATGTAGCAAAGTGAGGCTTCCAACTAAGAACAGCTGAAG--GACTCCAAACTGCCCCATCGAAAGGATTCCTTCCCCGTCACTGCCAAAG--CCACCTGGGTGAGGACTGAGA----GAGCC--------AAAGACCTTTCCTTGGCCAA------CCACAGTGTTCCCTGTCTCTGCTGATGTTCCT---ACAGCTTTGCAACCTCTCACCTTTTCACACGTTCAT chr4 + 94230402 32056598 32056597 32057245 32056598 32056597 32057245 648 TTCACCTCTTTCCCTTTAAAAAGTGTCAGATGCTT----AGAT-------CCATGGAAATGGAACATATTTTCTCATTACATTAATTAATGGGTCTGCCTGGGTGGTATAATTCAGTTTAAATTTCCTTT-AGTATTCTGTCATACCTAAAAAGGATCTTATTTTTGT----------GATGTCTTTAAATTTTTATGACTTCTACTCTGTTTAGTCTGTGTGTAATCCTT-----GAAACCTAATGTCCTAGAAAATCTGCAGGTTTTTCTCAAAACTGGCACACACTCCAATTTATAGCCACTTCTTCTT--------------AGAACTCCATGCAAGTCCTTAAGGTGTAGTTCACAGCTCAGGGAATTTATGATTACATCGTCAAAGTAAACTAAAGCAATGTGATATATTAAAACTGACAAGATGCTGTTCATTAATCTCTGAAATACGGCCAGGTGTGATGTAATTAAGAGAGGCTTCCAACCTGGAGAAGTCTAATACAACTCCTACCTCTGCCTGATGATGGCTTCCTTACCTCATGTGGGAAAAGATCTGTCTAGGTGGGGACTCACAGTATGAGTCTCATTTCAGAAGAATGTGGTTTGGGAAAAATGAGACAGGGTAATCCCTTTCTATGGCAGTGTTTCTCAAACAGTTTAGCTTCTGTTTGCCTTT---CATTTTCAT ..:x.:....:.:.x..xx...:.....:.x....----.x..-------.............................x:...........x.....:.......:.:.....:..x...:........-..x...........x......................----------.:...........................:.......................-----......................:.:...x...:...............x:x:.x..x....:..:x.:.:..x:..--------------......:...x:................:...:.......................................xxxxx.:x.::..........x.........................:.......:.:..............::x...x............:x:..:x..::x..x--:.....x.x..x:x..xxxx:.x..x......x..:xx:::x.xx....--.:::..:....:.....x.x.----...:.--------:....x:x.xx:....xx..------x..x:..:x.....x...x..x:::....:..---....:..x..xx.:x:.::.....---..:x..... 35M4D4M7D80M1D37M10D53M5D76M14D178M2I49M2I21M4I5M8I20M6I32M3I24M3D9M 487/623 78.2% 648/94230402 0.0% 69/623 11.1% 112722999 77491556 +3164 chr4 + 190214555 144790765 144790764 144790831 67 CCTCCAGCTTTGATTTTTGTTTTCTGGGTTTTTCTGTTGTTGTTGTTGTTGTTTTTGTTTTTGTTTT chr4 + 94230402 14999506 14999505 14999568 14999506 14999505 14999568 63 CCTTCATATTTAAATTTA----TGTGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTT ...:..xx...:.x...x----.x.........:.............:......x.x.x........ 18M4D45M 51/63 81.0% 63/94230402 0.0% 4/63 6.3% 129791259 60423296 +3350 chr4 + 190214555 144790766 144790765 144790843 78 CTCCAGCTTTGATTTTTGTTTTCTGGGTTTTTCTGTTGTTGTTGTTGTTGTTTTTGT---TTTTGTTTTCCTTAGGATTGC chr4 + 94230402 28945647 28945646 28945727 28945647 28945646 28945727 81 CTTTAGGTTTCATTGCCTTTTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTCTCCTAAAGATTAC ..::..x...x...x::x....:..x..x.x.:................x.x.....---....x..:....x.:....:. 57M3I21M 58/78 74.4% 81/94230402 0.0% 3/78 3.8% 115845119 74369436 +5723 chr4 + 190214555 144820570 144820569 144820827 258 TCCTGAT-CTTTCAGACCCATGGCAATCTGGGGCCTGTTTCCTATTCCCCACATGCACTTTC-AGCTGTGGTCTTTTTCCAATCAATTTCCAGATGTTGTTGCTTATTCATTTTATTTT-CAGCACATTTTATCCTTT-CCTGAACTCCCACATAATCTTCTTC-------CATGCCACCCTTCCTTCCCATACCCACCCCA----ACGAGGCAAATTCCTAAACTCTGCTGC-AATTACACCAAATTTAATTGGCTCTTTCATGCCCCAGCTG chr4 + 94230402 32063421 32063420 32063685 32063421 32063420 32063685 265 TTCTGATGTTTTCCAATCTGCTGTAGTCTGGATTCTGTTTTCTCTTACC-AGTTGCACTTTTTGGTTGTTTCCTCTTTCAAATTAGTTTCCAGATGTTGTTACTTATCCATTTTTCCCTGCAACACA--GCATCCTCTGCTTGAACGTCTCCACCATTCCCTTctgcatttcctcctgcatttcctccCTCTATTCAACTCACAATCTAAGTCAAGATTTTGAAACCTGTTGTGAATTACA------TTAATTGGTAGTTCTTTCCTACAGCTG .:.....-:....x:.:.:::x.:.:.....:x:......:..x..x..-.xx........:-:.:...xx:..:....x...:.:...............:.....:......x:::.-..:....--x:.....:.-.:.....x:.:x..:x..:::....-------.x.x.::.x:.....:..:x..::..x.:..----x::..x...:x.::.:..x:...:..:-.......------........:xx..::x.x.:x...... 7M1I41M1D12M1I56M1I7M2D9M1I25M7I31M4I27M1I7M6D27M 165/249 66.3% 265/94230402 0.0% 25/249 10.0% 112757149 77457406 +3953 chr4 + 190214555 144822706 144822705 144822788 83 CATGGTGGTGCATGTCTGTAATTCCAGCTACTTGGGAGGCTGAGACAGAAGAATCACCTAAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:..--...:.............::........x.xx:x...x...:.:.......:..x.xx:..:..:.. 15M2D66M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 68789509 NA +3410 chr4 + 190214555 144834097 144834096 144834166 70 AGTGGTGCTGCATTCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCA-----CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ........x-----.x....:.:.:.........::........x.xx.x...x.............:.. 9M5D56M 52/65 80.0% 65/94230402 0.0% 5/65 7.7% 68800897 NA +3721 chr4 + 190214555 144849031 144849030 144849167 137 TATATTTTTTGATCTGAATGGGTGATAACATGTATTGTGCACATGCTGTGAAAATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAT-------ATATAATATACACT chr4 + 94230402 4618299 4618298 4618427 4618299 4618298 4618427 129 TAAATTCAGTGTTCTGGAAGGTTTTTGCCCTATATTGTG-----GCTGT----------TTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT ..x...:xx..x....:.x..x.xx.:x.x.:.......-----.....----------:.:...:...:x:x.::.x.......::..............x:....::......x.x.....-------.....x....:.:. 39M5D5M10D64M7I14M 87/122 71.3% 129/94230402 0.0% 22/122 18.0% 140230732 49983823 +3232 chr4 + 190214555 144849089 144849088 144849163 75 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATA----TATATA-TATATATATATAATATA chr4 + 94230402 4618346 4618345 4618425 4618346 4618345 4618425 80 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATA ...:...:x:x.::.x.......::..............x:..x.x:.....----......-....x......x..... 52M4I6M1I17M 58/75 77.3% 80/94230402 0.0% 5/75 6.7% 140230743 49983812 +3856 chr4 + 190214555 144849090 144849089 144849178 89 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATAATATACACTCATGATTTGTT chr4 + 94230402 4618339 4618338 4618427 4618339 4618338 4618427 89 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATT ..x.:.:...:...:x:x.::.x.......::..............::x...::......x.x......:....x.:x:..x..x.:.. 89M 61/89 68.5% 89/94230402 0.0% 0/89 0.0% 140230751 49983804 +3102 chr4 + 190214555 144849091 144849090 144849152 62 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA chr4 + 94230402 4618346 4618345 4618407 4618346 4618345 4618407 62 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA ...:...:x:x.::.x.......::..............x:..x.::......x.x...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 140230745 49983810 +3286 chr4 + 190214555 144849091 144849090 144849165 75 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATAATATACA chr4 + 94230402 4618342 4618341 4618416 4618342 4618341 4618416 75 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATA .:.:...:...:x:x.::.x.......::..............x:x...::......x.x......xx...x.:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 140230749 49983806 +3070 chr4 + 190214555 144861920 144861919 144861972 53 TTAAAAAGCTTTAGAAGAGTAAGGAAAGGAAGGGAAAGAGAGAGAAGGAAAGT chr4 + 94230402 71715039 71715038 71715091 71715039 71715038 71715091 53 TTGAAAGGCTGCAGAATAGCAAAGTTAGGCAGGAAGAGAGAGAGAAGGAAAGT ..:...:...x:....x..:..:.xx...x...:.:................. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 73146881 NA +3509 chr4 + 190214555 144871673 144871672 144871756 84 ACTTGGTGGTGCACACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATCACTGCAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::.........:--....:.:...........::........x.xx.x...x....xx.......:..x:xx:..:..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 68838477 NA +18124 chr4 + 190214555 144872463 144872462 144873192 730 AAGAAAAACAACCACTACCAGAAAAGCTCTTCTTTGTTTTCATTC-TTCGCAGTCCTTCAGGAAACTCTTGATAATGTGAAATGTTATTACTGCAAATGTTGGCTCAAGCACGTTTACTCTAGAGTCTGACT--ATCAGTGACTTGTTCGCAAAATAAAATCATTTTTAAAGCCTACAAGGAAAGCCAAGAGCAAACCACAAATCAGAAAACCACCAAGGCGGGCTGGCCTCATTGCCAGAATTTAATGTGATCTAATGCGAGGACAACAAGATGTGAGAATTTGATTTTACGATGTTCCATGTAACATTTGCCAATACGGAGGGGTTGGGCCCAACTTCCCCATCCTTAAGCAAACATTTGAAGTAA--TGTTTCACTTTCT-------TATCAGTTTGAATTCTG-------------TCAGC------------GAGAGGGTAGAGATTCAGCCGGGCCTGCTCATT---TTAAAAGTGCCATCTGCTTTGGATGCTCATAGATTTGCTTAATATCCATTTGTATAAGA---TGAAGAT--GGGCAGGTGGGGAAGGGGCCAGGAAAATAG---GATGAAGCTATTTAGTGGCAGTGTACCAACTGGACTGCCACTCTCTTCTGCACTGGTGATTTATTCCATGGGTGGGAAGGCAGGAATAGGGCTAACTTAAGCAACATTCTTTCACAAGCAAAAACTAACCCCAA----------------TGAGAAAGAGTCAGATCTGGGCTGAATCACGTTGTCCAGTCTCACACCAAATGGA--ACTGGAGCTCAG chr4 + 94230402 32070316 32070315 32071094 32070316 32070315 32071094 779 AAGAGCTACAACATGTGCCTGAAAAGCT-----TTGTTTTAATTTGTTAGCTGTTCTGCAAAGATCTCTTGATAATGCAGAATGTTTCCACAATAAATGTTGGCCAGAACAAGTTTACTCTAGAGTTTTACTGTATCATTGA-GCATTTACaaaataaaataaattt--aaataaGTAAGGTTGGCCAAATTCAAACCACAAATCACAAAACCACCAAGTAGGACCATCGTCCCTGCCAGAGCTTAATGTGACCTAATGGGAGAACTGTGAGAGGTTAGAATTGGTTTTTATGTAGCTTCATGTAATATTTGGCAAACCAAAGGAGCTGGGCCAGGACTTCTGATCCTTAAATAAACATTTGATGTAATTTTTTTCACTTTTCATCATAATAATACTCTGCATTCTACCCTCCTATGACCTCAGCCTCTTTTCCCCAGAGTGGGTCGA-ATTTA---GAACCTCCTCCTTCACTTTTGAGTGTCATTCGAATCAGCCAGTTCCAGATGTGTTTCACCTCCACCCACAACAAGCCCTGCAGGTCCAGCAAAGTGCAGAGAGGGGAAGGACTACAGGGAGAAGGAGCTGTGCCCTGGCAGCACATCAGTTGGCCTGAAACTTCTCACTGAGTTTATTATTCATAGCACTGGTGGGAGGGCAGGGGGCAGGGTGACTCACACAAGATCTTGTCTAAATTGAAAACCAATACCAATCCACACCCCCGCAACTGAGAGG-----AGAGCTGCGGTGGGTCAGTGTGGTCAGTTTTGCTTCAAGTGGATGGCTGGGCCCCAG ....:xx.....xxx.:..x........-----.......x...:-..x..x..:..x..:::.x............:::......x::..x::..........:x:.:..x..............:.x...--....x...-x::..::...........x.x...--..::xx::....xx:.....:xx..............x............xx..:.::x.x..x:.......::.........:......x...:..x:::...x..x......x.x.....:.xx.:.:.......:.....x...xx.::...:.:......x::x:.:.:x........::..........x....--.x.........::-------..x:.x.:..x.....:-------------.....------------...x....x..-...:.---.::...x...x..---..xx:....:...::.xx.::.x::x.:x:....x..:..x.:x....:::::.xx.::---..x..:.--:.xx.:...x:..::...xx....xx.:..---..x.:....:.x:xx......:::.:..::...x...xx...::::x...x::.x:.x...:..xx..:x.......:......::xx:..x.:...:.x:...x..::.x..xx..x::.....:..:x....----------------.....::-----...x...x.x..::...xxx..x:....:.::.x:...:....--:....:x.:... 28M5D12M1I86M2I8M1D24M2D199M2I13M7I17M13I5M12I11M1D5M3D13M3I59M3I7M2I30M3I134M16I7M5D43M2I12M 473/713 66.3% 779/94230402 0.0% 83/713 11.6% 112802147 77412408 +3829 chr4 + 190214555 144878777 144878776 144878859 83 CATGGTGGTACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:..:.--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 68845580 NA +9726 chr4 + 190214555 144884896 144884895 144885240 345 ACCAAAATGGCACCAGGGACTTACAGAACATGTCTCAATTCGTAACTCCATTTATTGAATAGCAAATGGATTAAGTATTTTAGAAG----------TTGCAAATAGGCTGGCAAATGCAGATGGGCTGGGACTACAAGAAAATGTAATAAACTTCTAATAAAACATTTGAGCAAACTCACACATCTGTGGACAGATGGGAGGCATTACGTAAT-CGAGTCATTGCTACAGCAAGCTCTAACCGTGCCCCCCTCCTCTCCACCCCACCAACCCACCCTTACCCCCCACCCTGCCCCACTGCTGCTGTTGGGCCAAGGTTGAGGGTAAAGGGCCTCTGTGAGTTTTCCTTCTCTGTCA chr4 + 94230402 32076632 32076631 32076918 32076632 32076631 32076918 287 ACCATAATTGCACTGGGGGC--------CCTGTCAGAA-----------AGTTATTGAATAGCTGAAGCATTAGGTATTTTAAAATGTATTATACTTTGTGACCAAACTGGCAACTGCAGAGGGGTTGGGACTATATTATAGTGTAGTAAAAACCTCATAAAACATTTAAACAAACTCACACATCTGCAGAGAGATGGGAGGTATTATGTAATGTAAGTCATTGCTAAGGTCACCTCT--------------------CACCCTACTA------------------------------GCTGCCACAGGAGCAATGTTCAGTCTAAAGTGCCTCTGTGGTTTCTCCCTCTGTCCCA ....x...x....::...:.--------.x....xx..-----------.x............x:.x.x....:........:..x----------...::.x:.::.......x......x...:........:.xx.x.:....:....xx:..x...........:.:................::..x..........:....:.....-::...........x:.:x.x....--------------------.....:..:.------------------------------.....:::x..:x...x...x..xx.....x.........:x..:...:...x.x:.. 20M8D10M11D37M10I117M1I24M20D10M30D58M 207/276 75.0% 287/94230402 0.0% 80/276 29.0% 112808264 77406291 +3364 chr4 + 190214555 144888824 144888823 144888902 79 GTGGTGCGTACCAGCAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCGCTTGAACCTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--..xx.:...:...........::........x.:x.x...x.:........::.:..x:xx:..:..:.. 7M2D70M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 68855623 NA +3111 chr4 + 190214555 144898168 144898167 144898229 62 TCCCTCTCTTTGTCTCTCTCTCTCTTTTATAAG--CACACCAGACACACACACACACAAACACA chr4 + 94230402 61957753 61957752 61957816 61957753 61957752 61957816 64 TTCCTCTTTTTTTTTTTCTCTTTCTATTATGAGGCTTCCACAGACACACACACACACAAAAATA .:.....:...x.:.:.....:...x....:..--:x.xx....................x.:. 33M2I29M 48/62 77.4% 64/94230402 0.0% 2/62 3.2% 82940415 NA +11292 chr4 + 190214555 144910747 144910746 144910997 251 TTTTTAACATTTGTGAAATGCAGCCTAACAATGTTCTTACTGTAGTCCTGCCCAAAAGTGATCACTTTTCTGTACTTTTCCTATGACAAATTTATTTTCCCTATATGCTTTTGTTGGCTAGCAGCTTTGGCATGACCTGACTGACAATGAGCCAGAAGATCTGAGCCGGGGGAAAATGCATG--GCTCTCAAGTCTTGGCACAGTGGTGGATAAGAGCAGAGCAAATGCCACGCATTCAAGCAGGGCCCTGTG chr4 + 94230402 32084595 32084594 32084835 32084595 32084594 32084835 241 TCTTCAGCACTGACAAAGTATAGCCTAACAGTACCTTTTCTGTAGTCTTGCATGAAAGTCGTCCCTTTCCTGTGC------------AAATTTGTTTTTCCTATATGCTTTTACTGGCTGGTGCAGTTGGCACAGCTTGACTGACAATGAGCCAGAAGATGCAAGTGTAGGGGAGACTCACGGCGCTCTCAGATGTTGGCATAGTGAAGGGTAAGAGCATAGCAGAAGTGATGCATTCAAGCACAGCCCTGCG .:..:.:..:.x:::..:.::.........:.::::..x........:...x::.....x:..x....:....:.------------......:....:.............::.....:.::xxx......:::.:.......................x::..:xx:...:.:.:x..:.--.......::.x......:....:x..:........x....:.x.:x.:...........x:......:. 75M12D95M2I69M 171/239 71.5% 241/94230402 0.0% 14/239 5.9% 112826152 77388403 +16387 chr4 + 190214555 144917852 144917851 144918357 506 CCAAAGGCTGAAAATGTTTTAATAATATGCATCTTATAGCTAGAAATATG-GTAAAAAATAAAGAATGAAGAATTTCAAAGCAAAATAAACAAACCTTC-----ACGTCACTTGAAGTAGACAACA--GTTAGAAAGGGGAAAAGGTGCTGGAAATGAAGTTAGAAGTAATCATTTTAAAGAGTGGGAA-TGACAAGCAAGTTTTTGTGGTGAGAAGAGTTTGTTTTCATGAGACCACATTGAACAAAATGACACAGTGGAACCATTTTATGTGGTCCTGTTCATATTTCCATTGGATAGACACTGTACTGATTCTACCATATGCTTT-----GCAGCCAAATATGACAAAATGTAACCTTAAGCAAAAATATATACA---AAATATTGTTTGTTATTTAAATTTTAAAACAAGTATTATATTCAGAACAAGAACCACACAGCAGTTAAGTATTATAAAACATACT----------CTATGTATGAGCATAGCTTCAGTCTAAACATTTTTTAAATGTTCTTTGATGAGAAGA chr4 + 94230402 32085924 32085923 32086429 32085924 32085923 32086429 506 CCAAAATCTGCA-----TTTAATAAAGTACATTTAAGATCCAACAACATATGTGGTCAAAAAGGAATGG-----TAGAAAGGAATACAAAGGGATCTTCTGCAAATATAGAGTCGAGTAGATACCAAAGCTAGAAGTGGTAAA--GCCCAAGAAACTACACGACTTGCAGTATTTTTGAGAAATGGGAAATGACAAGTAAGTTCT-GTGGCAAG--GAGTTTATTTTAATGGAACAGCAGTAAAAGAAATGACACAGTGGAAGCATTTTGTGTGGTCCTGTTCATATTTTCACTGGAAGGACAGAGTGCTGATTCCACCATAAGCTTTTATTAACAGCCAAATCCGACAAAATGTGATTTTAAGCTAAAATATATACATACATAAATTCTTTATTATTTAAATTTCAAAACAAGCACAGCATTCAGGCTAAGAACTACGTTCCTGCCAA-TATTATAGGACATAACGGTACTAAGGCTATGTA-----------TCAGTCTAAACATTTTCTCAGCATACTATGATGAGAAAA .....:x...x.-----........x:.:...:.x.x.x.:.:x..:..:-..::xx..x..:.....:-----.xx....x..x.:...x::.:....-----.::.x:xx.x:......:.x..--.:.....:x..x...--.:x.x:....:x.x::x.xxx.:.:.xx....:.::.:......-.......:.....:.-....::..--......:....x...::..x:..x.:..x:................x......:...................:..:....x:....xx..:.......:......x.....-----:.........x:..........:.::......x............---.x.x...x...:............:........:.:x::......:x:......:..::xx.x.::..-.......::.....x:----------.......-----------................:.x.:::.x..x.........:. 12M5D33M1I18M5D25M5I22M2I15M2D44M1I15M1D8M2D112M5I45M3I68M1D16M10I7M11D39M 348/479 72.7% 506/94230402 0.0% 54/479 11.3% 112831928 77382627 +3099 chr4 + 190214555 144935501 144935500 144935595 95 TTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTTCCTTCCTTTCTCCCTTCTCTCTTTCCTTCTTTCTTTCCTTC chr4 + 94230402 63998163 63998162 63998257 63998163 63998162 63998257 95 TTCCTTTCCTCTTCATATCCCTCCTTCCTTGCTATCCTTCTCCTTAATTCCTTTCCATCTTTCACCCTTTTACCCTTTAACCTCATTCTACCTTC ......:.:..:.:x:x...:..:......x..x:.:.:....:.xx:...:....x..:..:x:..:..:x.:....xx::::x.::.x..... 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% 80937338 NA +3248 chr4 + 190214555 144937543 144937542 144937625 83 CATAATGGTGCTCACCTGTAGTCCCAGCTACTTGGGGAGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:......--..x......:...........::::......x.xx.x...xx:........::.:..x:xx:..:..:.. 11M2D70M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 68904346 NA +8527 chr4 + 190214555 144939206 144939205 144939697 492 ATTAGCCTAACTTTCTCCACCTGGATATTCTTTTGATCTTTTTTCCTTATTAAATTAAAATGTACCAAAATGCAATGCCTGTTCTTTAGCAGATCAGGCAGTTCAAT------GTACAAAACCTGAATAAATATCTCCCACCCCCACCCCCAGAGCTGTATGCAATTTGAGTGATTCTTTAAAGGA-CTTGTTAAAATGCCAAAATAGTGCCACAGAAAACACGTCAAATAAAGATTTA-----AGTTTTCTTTATGAAAAAAAAGTGTTTAACAAGGGTTTATGGGGTTTTATAAAAACACCTTAACACCTTACAGACCTAAGGGGGAAAAAGCTCTGTTTAAGTATCATACACCAATAGCAGACCACCCAATGCTGATGACTAGAAGCCTCAAACAGACCCATCCTTGGGAGCCTATGTGGAGACCCTTAATTTTATGGTCATTTTAATTGTATTTGGGTTATTACCTCATGCCCCAGCAAACACCTACAGTATTTATTAAA chr4 + 94230402 32093857 32093856 32094300 32093857 32093856 32094300 444 ATTAGCATCACTTTCAGCACTTGATTTTTCTTTC-------TCCCTTCATTAAACTAAACCATGCTAATA--------CTGTTGACTGGCTGCAAAGAAACATTTATTCTTCGGTGCAAA---TGGAAAAAT----------------CTCATAGATAATTG---TTAGCCTGATG---TAAAGCAGCTTGTTGAAACATCAACCTGGAAATGCAGCGAACA--TCCCATGAAGGATTACTTAAAATTTACTTCA---ACAAATAACGTCTAATGATGGCTTACACAGTTTAATAAAAGCACCTTAACACCTCTCAAATTTA---GAACAAAAGTT---------TACTACAAACTAACAACAGACCACCCAACATCTTTGCCTGAAAGCCTCAG-TAATCTCA-CCTTTTGAGATAGTGTACATACTCTCAGTATTATTAATATTT-AATTGCATTTAGATTATTATCTTATGTTCCAGCAAAAACCTATGGCATTTAATGAA ......x.x......xx...:..:x.x......:-------.::.:.:......:....x::.:.:..x.--------.....xx:.:..x.xxx..:x.xx.:x..------..:....---..:.x....----------------.:..x..x.:xx..---..x.xx....x---.....x.-......:...:::...xx.:.x:x::...x:....--..xx..:...:x...-----.:...x...:.---.x...x.::..:...::.x..:...::x:....x......:.............:x..:.::..---.::x.....:.---------..::.:.x..:..:.:............::::xx..x..::........:-:.:x.:..-....xx...x:x:...:x.x..:..:.:.x....x:x:....-.....:....:.:......:..:...::........x.....::.:.....x.:.. 34M7D29M8D29M6I7M3D9M16D14M3D11M3D7M1I35M2D15M5I11M3D64M3D11M9D50M1D8M1D42M1D56M 287/432 66.4% 444/94230402 0.0% 72/432 16.7% 112845349 77369206 +3008 chr4 + 190214555 144942304 144942303 144942371 68 GTGTGTGTGTGTGTGTGTATATTCTCTATATATATTCTGTATATACACACACACACACACACACACAC chr4 + 94230402 73857043 73857042 73857110 73857043 73857042 73857110 68 GTGAATATGTGAATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCAC ...x:.:....x:.:.:.:.:.xx.x......x..x.xx...........::.........:..x... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 71085261 NA +3031 chr4 + 190214555 144951180 144951179 144951232 53 TTTACCTAAAAGCAATTTTCTTTCTTTTTTCTTTTTTCCTCAAAATAATCTCT chr4 + 94230402 49131912 49131911 49131964 49131912 49131911 49131964 53 TTTATCTGTGAGCAACTTTCTTCGTTTTTTCCTTTTTTCTCATAACAATCCTT ....:..:x:.....:......:x.......:.....:....x..:....::. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 95819268 NA +3158 chr4 + 190214555 144991730 144991729 144991796 67 TATGCGAGGTCCAAGACAATTATTGTTCTTCCAATGTGACCCAGGAAAGCCAAAAGATTGAACACCC chr4 + 94230402 43915637 43915636 43915703 43915637 43915636 43915703 67 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCC ...::.x.........:....x:.x...x::x......x.....:x...x......x...:.::... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 101076093 89138462 +19095 chr4 + 190214555 144995188 144995187 144995660 473 TTACATGTTAAAGAAAATAAAGATAATATGACCCCAAATTTATTTGTCAAAGTTACAATAAA-ATATTTTTAAACATATACAAAATTAGATATAACGGATGCCTTGTTCAATAAAGGTACATGATATATTATTTAAATACAG----GATAAAACAAAGATACGTTTAATGATTTTCGTCT---CATTTTAAAGTCACCTTATTGAACGATACATCATGAAATCTATAGTTGTACATCTAGGAAATTTACCAATGGAGCTCTCTTCTACTGGTGTGTATATTTTAATTTGTCTCATATGGGTGTCTCTTCCATTCTGGTGATTGGCTAGAACAGCAATCTGTATCATGAATGTACGAGTTGGCTTCTTATGATTGTCAGTTAAGGGAACATGAATCCAGCCACTTGGTTCCACCAACTCAAGTTGCTGCCAAG----GGAAAAAAAATCAGATTATGCTTTTATTCAACAAATATAATTTATAACA chr4 + 94230402 32099432 32099431 32099890 32099432 32099431 32099890 459 TTGCACGCTAAAAAAAAGAC------TGTAATACCAGATTT-TATTTCAAAATCATACAAAATATAAATGTAAACATATA----ATTACAC-TGAAGTAAACCTTGCT---TTTAAGTATTTGA-ATATT--TTAACAACAATACTGCCATCAAAAAGATGTCTTTATTATTTACCGTTAGGAAATTTTA------CCTTATGGAGCGATACATCATGAAATCAATTGTTGTGCATCTAGGAAATTTACCAATAGAGCTCTCTTCCACTGGGGTGTACACTTTGATTTGTCTCATATGAGTGTCTCTTCCATTTTGGTGATTAGCTAGAACAGCTATCTGAATCATAAATGTGCGGATAGGCTTCTTATGGGTATCTGTTAAAGGAACATGAATCCAGCCGCTTGGTTCCACTAATTCAAGTTGCTGCCAAGAACAAGACAAAAAAGCAAAACATTCAGGAA--CAGTAAATATAAACTATTACA ..:..:.:....:....x.x------.:.:.:x...:....-.x.x.....:.:.:.xx...-...xx.x..........----....x.:-.:.x.x.x:.....:.---.xx.:...:x...-.....--....xx...:----.x:.xx.x......::x....x.:x..x:...:x---x......------......x..:.................x..x.....:....................:...........:.....x.....:.:...:..............:..............:........:...........x.....x.....:.....:..::.x...........:x.:..x.....:.................:...........:..:................----:..x......x..:.x:..x.xxxx.--..::........x:...x... 20M6D15M1D20M1I17M4D7M1D16M3D13M1D5M2D10M4I34M3I7M6D236M4I26M2D21M 349/447 78.1% 459/94230402 0.0% 38/447 8.5% 112895756 77318799 +3170 chr4 + 190214555 145001242 145001241 145001286 45 GGGAGGGAGGGAGGGAGGGAGG-GAAAGAAAGAAGAAAAGAAAAGA chr4 + 94230402 24698988 24698987 24699033 24698988 24698987 24699033 46 GGGGGGGAGGGCGGGGGGGGGGAGAAAGAAAGAAAAAAAGAAAAGA ...:.......x...:...:..-...........:........... 22M1I23M 40/45 88.9% 46/94230402 0.0% 1/45 2.2% 120302254 69912301 +3300 chr4 + 190214555 145012109 145012108 145012227 119 CTAGAGCAGCTCTAATAGAAAAACAGTGTGGGCCACAATTACAAGCTATATGTATATGTGTGTGTGTGTATATATATATATATATATACACACACACATATAT---------ATACATATATATAAAT chr4 + 94230402 79265494 79265493 79265605 79265494 79265493 79265605 112 CTGTAGCTGTCCTATTCAGTCAACAGTGTG----------------TGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAAT ..:x...x.::...x.x::xx.........----------------.:.:...::.........xx........:...:.::.:.::....:..x......x.---------.:..x.x......... 30M16D57M9I16M 73/103 70.9% 112/94230402 0.0% 25/103 24.3% 65746615 NA +3025 chr4 + 190214555 145026921 145026920 145026988 68 ATATATATATATATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATAT chr4 + 94230402 41749097 41749096 41749164 41749097 41749096 41749164 68 ATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCAT .....x.:.:.:.....x:.x.....xx..:....:....:....:...:..:..:::x.....x:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 103277824 86936731 +3325 chr4 + 190214555 145026922 145026921 145027005 84 TATATATATATATATATA---TATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 29870197 29870196 29870283 29870197 29870196 29870283 87 TATATTCACACATGAATAGTTTATATATGTGTGTGTGTATATATATGGACTGCTATGAACACATATTAATTTTTTTGTACATTTTTT .....x:.:.:..:x...---.................:.......:x.:xxx...:x.:.:....xx........x.x:x...... 18M3I66M 61/84 72.6% 87/94230402 0.0% 3/84 3.6% 115156725 75057830 +3057 chr4 + 190214555 145026933 145026932 145026995 63 ATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTT chr4 + 94230402 29797141 29797140 29797203 29797141 29797140 29797203 63 ATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT ...:...::...::......:......x.........:.:.:.x.x.x..x.x.::.....:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 115229792 74984763 +3286 chr4 + 190214555 145026934 145026933 145027004 71 TATATATATATATGTGTGTGTGTGTATATATATATATATA------TATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 77957772 77957771 77957848 77957772 77957771 77957848 77 TATGCTTATTTTTATGTATGTGTTTATATATATGTATGTAAAGTATTATATATAACAAGATGTTTTTTTTTTTTTTT ...::x...x.x.:...:.....x.........:...:..------........xxx.x..x............... 40M6I31M 56/71 78.9% 77/94230402 0.0% 6/71 8.5% 67069162 NA +3070 chr4 + 190214555 145026949 145026948 145027010 62 GTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9942689 9942688 9942750 9942689 9942688 9942750 62 GTGTGTATGCATGTATAGATATATTTGTATACATGCACATACTGTATTTTTCCTATTTTTTT ......:..:..:....x......x.:....:..::.:..x:.x.x.....::.x....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 135084260 55130295 +3202 chr4 + 190214555 145026950 145026949 145027013 64 TGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGA-----GTTTTTGTTTGTTTTTATTATTTTTTT .........:.:.......:.:........x.-----:.....x...x.....x..x....... 32M5D27M 49/59 83.1% 59/94230402 0.0% 5/59 8.5% 111775947 78438608 +3071 chr4 + 190214555 145026967 145026966 145027059 93 ATATATATATATATATATATATTTTTTTTTTTTTTTTTTT----TTTTTTTTTTTTTTTGAGACAGA---GTCTTACTCTGTCTCCCAGGCTGGAGTGCA chr4 + 94230402 24792626 24792625 24792722 24792626 24792625 24792722 97 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC---CTGGAATGCA ...................x:........x.........:----..x:x..xxx......::::x..---:...:.x...xxx....---.....:.... 40M4I23M3I17M3D10M 68/90 75.6% 97/94230402 0.0% 10/90 11.1% 120234341 69980214 +3361 chr4 + 190214555 145034505 145034504 145034582 78 CACTTAACAAACTCTCCTTTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 55694431 55694430 55694508 55694431 55694430 55694508 78 CACAAGACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...xx:...:.:x.....x.x:x.:...::...:...:.::.......:.....:.x:x::...::............ 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 89340074 NA +3100 chr4 + 190214555 145034516 145034515 145034580 65 CTCTCCTTTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 + 94230402 55694444 55694443 55694508 55694444 55694443 55694508 65 CTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...::x..:x.:...::...:...:.:........:.....:.x:x::...::......:..... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 89340072 NA +3196 chr4 + 190214555 145034519 145034518 145034581 63 TCCTTTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857600 6857599 6857662 6857600 6857599 6857662 63 TCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ....:x.x.x.......::..:...:..:.:x:.........x...........x..x.x... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 138176919 52037636 +3182 chr4 + 190214555 145036997 145036996 145037059 63 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGCATGCATGAAT chr4 + 94230402 60813649 60813648 60813711 60813649 60813648 60813711 63 TGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGTAAACATGCAAGAAT .....x.xx......x:x.........:.........x..x.x...:..:x:......x.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 84223348 NA +3120 chr4 + 190214555 145037002 145037001 145037065 64 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGCATGCATGAATGTGTGT chr4 + 94230402 79265519 79265518 79265582 79265519 79265518 79265582 64 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .............::........xx...:.:.:::.::.:.....::..:...x:x..:.x... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 65771483 NA +3297 chr4 + 190214555 145038822 145038821 145038873 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTAACTAAGGCAAAACCTATAA chr4 + 94230402 52237779 52237778 52237830 52237779 52237778 52237830 52 AAAAAAAAAAGAAAAAGGAAAGAATAAAGGCTAACTAAGTTGAAACGTATGA ..........:.....::...:..x..............x::....x...:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 92801043 NA +63932 chr4 + 190214555 145042631 145042630 145044749 2119 CTATAAACAGAATCCCTCACAAATT--GAAAAATATAAGAACCAACAAATGTTTCACTACACTCAGAAAACACAGAGTCTTTATTCCAAGAGGAACTTTCAGTAAAAAAAAAATGATGTGTGAACAGCAGACACTGATGTTCACACAAGCATACTGCAG-ACAACCCAGCAGGCGG-----------TTTTCTGTTTTTTTTGGATTATGCTCTGGAGGTGCTGGCACAATGGAATTTCAATACCCTAACTGCTTATTTCTCTGTACATC----TTTAAAATAACAGGTAAA--GAAAAAATTGTCTAAAAAAAAA------------------------ACAAAATAAAGTGTTTTTAATTCTTCTTTTCAAACGATGTAATTTATAACCATTACACAAATAGCGAAGAAGCACAAAAGAGGGGAAAAAAGAAATAAAGTAATGTTCCAAAGGTTCAGTTTACAAGGACCTCACACAAAGTTTTT----------TTTTTTCTCTGCAACTCTTACTAGAAACAGTATTATTTGCTAAAAATGCACTAGCTGCCAAGAGCTATGGTCCATCTAAAGCAAA-ATGCTTAAGATGGAAACAG--TGTTAATACAAAAAAAAGAGGCAGGATTCAGTATACAAATTT-CTGTAAAATCTATTAAA--AAATAAGATGAAGTTTTGATTTTG---ATACATTATTTTGACTAAAAAACAATTCTAATTATAGATAAAATACTAAAATACATAGTACTGTATTAAAACAATAA-----GTAATCAAATTTCAAACTTTCTAATTAATCCTTTTTTT--------GTAAGTTATTGGGAATTCTACACTAGTCTTGGTTCACATGATAGAACAATGGGAAAATTTTCCGAATGGTTGAACACTAACCCTGACAAGTGTGGAGAGCCAACTACAATACATTATATGGTAGCATAACCTGCCACCCACGTTGCTGAGAGAACAGCTTTCAAACACATGCACTGAGCTGTAAAACCGCAAAATCCCTTATTACACATTGTCTTTCTTACTTTAGGTGAAATATACCATCAATTCTTTCCATTATAAATCT------TTTTTTATTAC---TATTTTTGAAGACCATTTA-----CAACTTGACTGTTGTTTTCTGACAAAGTAAAAGATGTCTTTTACAAAAAGAAAATGCAACAGGAAAGTTATCACCCTCCTACAGTA-TTACAAATGAAGGCTGATATCTGCTGCATAATTTCCCATAGATTAACTGGAGGATCCATATTACCTAAAATGTTTCCAGATAAAATTCTTTTTTTTCCCTTTGAAAACCAAACCCTTATACTAGAGTTCACCAAGTTTCTTAAAGCATTTGAAAATACTTGCT---TTCTTTAATAAAAGCTGA--------------TATATTGCTTTGGGAAGTTCTTTAATATATAATTTTGAT-CATTAC---CAAAAAAAGAGAAAAACAAATTGT-CAAAA--TTTGTTAGAAAGTAAATGTTCTTTCTCTCTTTCTATGTTTCTTCCCAACACTTTCCCCCTTCCTCCTGCACCAGCACAAATACAAACCTATACTAAAAAACAAAACAAAAAATAGATTCAAGGAGATAATGCTGCCCTTGACAGTATTTGCATT-----ATATTGATGATACATGTAAATGAAGAAAGACTGAAGAATGGCAGCCACACATCATACTCATTATAGCA--ATGTGTTT----GACAAAAATACGTTCTTACCTTTCAGAAA-AGAGCTCAATGCAACAATGAC---------TATCAAATCTAACAAAAGGGCTTAAGATACAGAACAAGGGTAAAAAAATGAAAAATTTAAAGACAGTACTTTTTAGAGATTCAAGAAGGTTAAAA---TCAT--TTCAAAAAATGTGTGTTTCTCTCTAACGTTTTGTCTGATTAATTTCCCTCCAAA---------ATTCTCCTTTCTATCCTTTGCATTTCCTTCCCCCCAACTCCCACCCACCATGACCCACCTCCACCCAC---AGTCTGCTAACTGAATCATAGCATTCCAGGACAGTTACAGGACATA-ACAGTTTCTTCTGGGGTTTTCATTCGCAATGTTGTTTGCAAAGAGAATTTTATTTGTAAGTGTTTCTATTATACTGACAGGGTCAATTAGTCTTGTGAACTATTGGTCTTTCTGCCTGATAGCTTGGTGGA-TCATTCAAGTGGTACCGTTCATAACCTATAACTGAATGCAGCCAATTAACCTCAGAAACATGAC chr4 + 94230402 32118683 32118682 32120790 32118683 32118682 32120790 2108 CTGCAATTATAAACCCTTACTACTTCTGAAAAAC-CATTGACCAACAAACCTCCCAGCACGTTCTTCAAACA--GAACCTTCATTCCAACAGGAACTTGCAGTAAAAAAAACACCATGTG--ACCAGCAGGCACTGACATTCACACAAGCACACTGCAACATAACCCAGAAGGTGAATTTTCAGGGTTTTTTTTTTTTTTTTGGATTATGCCCTGAAAGTGCTAGCACAAAGGAATTTCAATACCATAATTCCTTATTTATCTGTGTGCCAGCCTCAAAAATAACAGGTAAAAAGAAAAAATACACATAAAACAAACATTCTCTTTAAATTACATGAATCACAAAATAAGTTTCTTTTAATTTGCTAGTTCAAACAACGTAATTTATAACCATGACACGAATAGAGAAGAAGCACAAAAG-GGAAAATGCAGAAATAACATAACGTTCCCAAGGTTCAGTTTACAAGGACCTCACACAAAGTTTTTGGTGTTTTTTTTTTCTTTTTGCAACTCTTACTAGAAACAGTATTATTTGCTACAAATGCAGTAGCTGCCAAAAGCTATGATCCATCTAAAGCAAACATGTTTAAGATGGAAATAGAGTGTTAATGCTGAAGAAAGA--CAGAATTGAGTATACAAGTTTTCTTTTAAAAGTGTTGAAGCAACTGCAGTACAGTGTAAAGTTTGTTTGTTCAGCTTTCTGAGCAAAACTTACTGC-ATTTGCAGATAAGCACTGAAATTATAGAGAAGTACACTAAGACAATAACAGAAGTAATCAAATTTCAAGCTTTCTAATTAAACCTTTTTTTTCCCTGCAGAAGGTTATTGGGAATTCAACACTAGCCATGGTTCACATGATAGAACAATGGGAAAATTTTCCGAATGGTTGAACGCTAACCCTGACAAGTGTGGAGAGCCAACTACAATACATTATATGGTAGCATAACCTGCCACCCACGTTGCTGAGAGAACAGCTTTCAAACACATGCACCAAGCTGTAAAACCACAAAATCCCTTATTACACATTGTC--CCTTACTTAAGGTGAAATACACTATC---CCCCTCTTTTACAAGTTTTGGTGCTTTTTTAAAACCTTCATCTCTGAAGTTTATTTAGCAGTTAACTAGACTGTTTTTC--------------AGACTTCCCTCCC--------AATGCCAT-------------CTTTCCTGTTTTATTTTCTAACCAAAACTTTTTTTTTTTATAGCA---CACATAAGAAACTTCACTGTCTTACACTGGCTTTATTTTTTT-------AATCCTACTTCCACCCGTGTTAAA--------------------TTATCTAATTTCTTAAGGAAATGTTGGGTATATGATTAATTCATTTATGGAGGCTTAGAGCAAAACTCTCTTCTGTTGCTTTT----GTTTTTT--------ATTCTGATACATGACTCACTGGTAAAGAGAAAAACTGGTTTTACTATACTTTTGATTGGAAGACCAGGTATTCTGTTATTTACTGTGGTTCTTTTCCATTGTT-------------------------------AAGCTATTC----------------AAATATATTCAAAGAGAAACTGCC-------ACAGGGTGCACAGTTACAGACATTGAC-ATTTATGTAAGTCAGATATTACTGTAGAACAACAAACATACTCCACCCTCATTACAACATGCTGTGGTTACTAGCCAAAGATATTTGC---CTTTTCTGAAACAGGGTACATGACAATAAAGGCAGACCAGCAAAACAAATTATACAATCAGACTTGAGATAT--------GGTAGAAGTAATAGCAATTGTTAGAAAATATAATTCTGAA--TAGGGAAAGTGAACAACTTCATGATTTTAGGAATGCAT-TTGATCTCATGC------TATGAAAAAGATACCTAAAAACATTAGTATATGAAACTTTCTTACTTAATGAGGTCCTACTCCATATCGCCCCCCCCCCACGCCCCAAATACTCCCCTGCAAGTCTGCTGTTTTAATCATTGCATTCCAAGATAGTTAGAGGATATGCACAGTTTCTTCAGGGGTTTTCAGCTGCAACTTCACTGGCAACAGGAATTTTATTTGCAAGTGTTTCTATTCTACTGACAAGGTCAATTAGTCCAAAGAACTATTGGTTGTTCTGTCTGATAGCTCAGTGTATTTATTCAAGCAAGCACTTTTATAACCCACAATTGAATGCAGACAGTTACCCTTGTAAACACGAC ..::..x:.x..x....:..x.x..--......:-:.xx:.........:x.::..x:..::..xxx.....--..::...:.......x........x............x.:x.....--.x......:......::............:......:-.:.......x...:.:-----------....:.x.................:...:.:.....:......x..............x...:.x.......x.....::::.----.:x...............--........xxx.xx....x...------------------------.........:x.x:........:x::xx.......:.:...............x....:.....x...............-..::..x:x........x:...:.....x....................................----------....:.:.:.................................x.......x..........:.......:...............-...:............:..--.......:.x:..:.....--...:...x.........:...-..x.x...xx.:..:..--..x.:x::.:x...x.x:.x....---:.x..x:x..:...x:....xx:.x.x.-.x..::......:xxx:x...x..:.x..x.x.::.:...:.......-----...............:............x.........--------.x.:..............x.......:.x..............................................:..................................................................................................::............:........................--:.......x..........:..:...---:.::..:x...:..:.:.------.......xx..---:..:.:.....x::.....-----:....x.......x..:--------------...:x..::.:x.--------.....x.:-------------.::....::xx..-..x.x..:x..::..xx.x.:.x:.::.xx.---.x....::xx.x:.x:xx.x:::.:.:.:x..xx.x.x...:-------...:..x:..::x...x.xxx...--------------------.:.:.x.:........:.x.x.xxx:::..:x..x.---...x..x..::.:...x.--------------.x.:.......x----...:...--------...:....-...x..---.x::x............x::..x.-.x.x.--....x.x.:...xxx.x..x:.:.x.:x:..x..:..x.....::.x.:xx..-------------------------------..x....x.----------------.....x......:....x.x...:-------....x:.x::..x.-----.:.....:-..x:......:.x.::x.xx....x....:::..:x..:..x:..:x.......:.:..--x....x..----.x....:...:x.x.---.:....x....-..:.:x..xx:...:..x.:.---------x.x.....:xx....xx:.:...:.....:--------....:..:x.xx.:x....xxx...x.:..:xx..:x..:--.x::...:..x..x.---....--..:x.::....::.-..xx....xx:.------.x...xx..xx.x...xx...---------..xxxx......xx.:.xxxx.xx....x.:..x:.x.x...x...x...:.x....xx.x.x...x:---........:x:.x......x........:..:.....x....:..:-...........x..........x::....:x.:::.x....x::............:.............x........:............:x:x...........:x.....:.........::...x.-.:.......:::xxx.x..:......:.:..:.........x..:...x...::x.....:... 25M2I7M1D37M2D46M2D37M1I16M11I83M4I18M2I22M24I80M1D65M10I85M1I19M2I19M2D21M1I17M2I24M3I28M1D48M5I38M8I213M2D26M3D18M6I11M3I19M5I17M14D13M8D8M13D13M1I31M3D42M7D24M20D36M3I18M14I12M4D7M8D8M1I6M3I24M1I5M2I53M31D9M16D24M7D14M5I8M1D59M2I8M4I15M3D11M1I21M9I30M8D40M2D15M3I4M2I14M1D12M6D21M9I68M3I46M1I131M1I64M 1446/1953 74.0% 2108/94230402 0.0% 321/1953 16.4% 112923948 77290607 +3585 chr4 + 190214555 145054601 145054600 145054732 132 AATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGC------------GTGCGTGCAGCGCATGTGTGTGTGTGTGCCTGTGTGTGTGCCTGTGTGTGTGTGCATGTGTGTGTGTGCATGTGTCCA chr4 + 94230402 79265515 79265514 79265651 79265515 79265514 79265651 137 AACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTT-------TGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA ..:..............::........xx...:.:.:::.:.:..:.:..:.:.------------...:x::..:.:.x.x.:.:.:x:..::.:.-------.....x.x..x....:..x:..::.x.x..:.x...::.. 54M12I31M7D40M 79/125 63.2% 137/94230402 0.0% 19/125 15.2% 65789086 NA +11408 chr4 + 190214555 145064530 145064529 145064715 186 AAGTTAAAGGATGACATATTTTTAAAAATTTGAAAGACATACCCGAATTTCTTGAAGGTTGTGAAAATTATTTCCTACTCTGACTGAGATCTTGCTTGGAGTATAGCTTTCATCAGATTTGTAGTCTGCATAAATACATAATGTCTTCACTGTTGTTTTTCTTCTAAAAGCAATAAAGTAAAAATA chr4 + 94230402 32129268 32129267 32129437 32129268 32129267 32129437 170 AAGGTAAAGAACTAAATATTATT------------GACCTACCCGCACTTCCTGGAGATTGTGAAAATTATTTCCTACTCTGACAGAGATTTTGCTTGGAGTGTAGCTTTCATCAGATTTGTAGTCTGCATAAATACATAATGTCTTCACTGTTGTTTTCCTTCT----GCAGGAAAGAAAAAGTA ...x.....:.:x.x.....x..------------...x......x.:...:..:..:..........................x.....:...........:........................................................:.....----...:x....x....:.. 23M12D130M4D17M 150/170 88.2% 170/94230402 0.0% 16/170 9.4% 112935262 77279293 +3554 chr4 + 190214555 145068780 145068779 145068849 70 TGTGCCTGTAGTACCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::.x......x...........::........x.xx.x...x.:...........:..x.xx:..:.. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 69035575 NA +8457 chr4 + 190214555 145081645 145081644 145081757 113 AAATGTATTAATTACCTGAATTGGATGTTCACTAAATGAGGCTGGGAACCATCTGATTGCCAATAAGTTTCTAGATTGTCATCTCGTAACTGATCCACTCCAAATCCTAAAAA chr4 + 94230402 32130153 32130152 32130265 32130153 32130152 32130265 113 AGACATTTTTAGTACCTAAATTGGATGTTCACCAAATGAGGCTGTGATCCATCTGACTGCCAGTAAGTTTCTAGATTATCATCTCGTAACTGATCCACTCCAAATCCTAAGAA .:.::.x..x.x.....:..............:...........x..x........:.....:..............:................................:.. 113M 99/113 87.6% 113/94230402 0.0% 0/113 0.0% 112951492 77263063 +8580 chr4 + 190214555 145095979 145095978 145096105 127 TTTTACCTGGTTTGCAAGATGAGAGTGACCAAACAGCTTGTGACCCAATTTCCCGTACTGTTCCAGTCCTTTCCAACTGCTTGGGGTCAGCACCAGGAGGTGTCTTGTTTGGTGTAGTCATTTTTAA chr4 + 94230402 32131249 32131248 32131375 32131249 32131248 32131375 127 TTTTACCTGGTTTACAAGACGAAAGTGACCAAACTGCTTGTGAGCCTATTTCTCTAACAGTACCCGTCCTCTCTAACTGTTTTGGATCAGCACCAGGTGGTGTCTTGTTTGGGGTAGTCATTTCtaa .............:.....:..:...........x........x..x.....:.xx..x..x..x.....:..:.....:..x..:...........x..............x..........:... 127M 107/127 84.3% 127/94230402 0.0% 0/127 0.0% 112964730 77249825 +9088 chr4 + 190214555 145104411 145104410 145104520 110 TTATGGCAGACAAGTTAACGAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGACAGGAATGCAAAAAGAGTTGTCCTGTAGTTCGAATGGGTAAG chr4 + 94230402 32136164 32136163 32136273 32136164 32136163 32136273 110 TTATGGCAGACAAATTAACAAGAATTGCTATCGTCAACCATGACAAGTGTAAGCCAAAGAAATGCCGTCAGGAATGCAAAAAGAGTTGTCCTGTGGTTCGAATGGGTAAG .............:.....:...........:..............:.....:..x........:..x..........................:............... 110M 101/110 91.8% 110/94230402 0.0% 0/110 0.0% 112968247 77246308 +7462 chr4 + 190214555 145105493 145105492 145105723 231 TTTGAAAATCTGCTTCTGTATGGAAATT--TAGAACCAGCATTGCCTAAATAACAGTGTTCGGAAAATTAGAAGATCAAAGGAAATGGCTTAATTATATCTTTTCCTTTA---CCAGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCCGAAACTCTTTGTATTGGTTGTGGTATCTGTATTAAGGTAAGTAATATTTTATTTACTGGATCAAACGTG chr4 + 94230402 32136698 32136697 32136907 32136698 32136697 32136907 210 tttGACTACATGTTCTTCTTTGGAATTTAGTAGTACTAGCA----------------------AGAAATAGGATACATCAGAAACTTTCTCAAGCTAATGTTATTCTTTATCACCAGGAAAACTTTGCATAGAGGTCACATCACAGAGCAAAATAGCATGGATCTCTGAAACACTTTGTATTGGTTGTGGGATTTGCATCAAGGTAAA----AGTTTATCTGCTTTATATAAAGTG .....xx.:x..:.::.x.x.....x..--...x..:....----------------------.:..x...:.x.:xxx..:..x.xx..:..x:xx..x..x.:.....---.........:.x...........:...:.x....................:..:.....x.................x..:..:..:.......:----.x.....:.:..xx..xx..x... 28M2I11M22D47M3I95M4D24M 152/205 74.1% 210/94230402 0.0% 31/205 15.1% 112968795 77245760 +9011 chr4 + 190214555 145107954 145107953 145108122 169 TTAGTTATGTGTATATGTCTACAAATTAATACAAAAATTAATTCTTTACTTTAAATAACAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATCTACCAAGCAACTTGGAAAAAGAAACCACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTA---TATTTTC chr4 + 94230402 32137573 32137572 32137736 32137573 32137572 32137736 164 TTAGTTAACTGTTTGTGTGCACAAAT--------AATGTAATATATATGTTTAAATTACAGAAATGTCCTTTTGGAGCCTTGTCAATTGTTAACTTACCGAGCAACCTGGAGAAAGAAACAACACACAGATACTGTGCCAATGCCTTCAAACTTCACAGGTATTTTATTTTC .......xx...x.:...x:......--------..xx....x:x.xxx.......x.........:..:.....x.....:........:..::....:......:....:........x.....:x....:.............................---....... 26M8D128M3I7M 132/161 82.0% 164/94230402 0.0% 11/161 6.8% 112970381 77244174 +10575 chr4 + 190214555 145109085 145109084 145109272 188 TCTGTGTAAATCTGAGTTGTTTTATTATTTTTGTATACTTGTAACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGGATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGTACGATGTATGTATTATCACCTTGTAAAA chr4 + 94230402 32138061 32138060 32138232 32138061 32138060 32138232 172 TCAGTGTAACTCACAGTT-----ATTGATGTCGCATGC-------AGGTTGCCTATCCCTCGTCCAGGTGAAGTCCTGGGTTTGGTTGGAACCAATGGTATTGGAAAATCAACTGCCTTGAAAATTCTAGCAGGAAAGCAGAAGCCAAATCTTGGAAAATATGATGTATGTATCAGCA----GTAAAA ..x......x..xx....-----...:x.x.:.:..:.-------.............................::....x..:........:..............:........:..:......:..........:..:........:........:..:...........:.x..----...... 18M5D15M7D133M4D6M 146/172 84.9% 172/94230402 0.0% 16/172 9.3% 112971024 77243531 +14952 chr4 + 190214555 145110087 145110086 145110454 368 TTTTTTTTTTTTTTAGGATCCTCCTGACTGGCAGGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACAAAGATTCTAGAAGATGACCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTCCTAAGGCTGCAAAGGTCGGTTTTTGATAGAGGGAACTTAACGGATATTAGTAGAAGTATAAAAGATATATCAAAATAAACTTGTTTTACTTTGTGATTCTTTTTAATATTGAAA----------GAAAATAGTAACTGTTTTTGGTAT---ATTGTGG--------------------CAGGGGACAGTGGGATCTATTTTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGGTAAGTGTTT chr4 + 94230402 32139760 32139759 32140144 32139760 32139759 32140144 385 TTTAATTCTGTCACAGGATCCACCTGACTGGCAAGAAATTTTGACTTATTTCCGAGGTTCTGAATTACAAAACTATTTCACCAAGATCCTGGAAGATGACCTAAAGGCTATCATTAAGCCTCAGTATGTGGACCAGATCCCTAAAGCTGCAAAGGT-------------AAGAGATTTCATTA--ACTAATGGAAAATTAGGAG-CCTCTCCTGATATGCTTCTTTTTATTTAAAGATTTTGTTAATGTGAAAAACTTACTACTGTCTGCAATGATTAATCTTGATATAGCATTGTGGGGTTATCTTTTCTTATCTTTTAGGGAACAGTGGGATCAATTCTGGATAGAAAGGATGAAACTAAGACACAAACTGTTGTTTGTCAGCAGCTTGGTAAGTAATT ...xx..:.x.:x:.......x...........:..:.................x..x..............:..:..:..x.....:..:..............:..:.....:..:.....:.....:........:.....:...........-------------.:.::.:..x.:x:--.:..:.:...:xx..::..-:x.x..xx:...x:...x....xx...:x::x.:..x.....:.x:...----------.xxx::.:.:.:.:x.:...:...---.......--------------------:....:...........x...:....:x....:........x........::.x:....x...................:x.. 156M13D14M2D19M1D49M10I24M3I7M20I83M 262/352 74.4% 385/94230402 0.0% 49/352 13.9% 112970327 77244228 +8415 chr4 + 190214555 145110958 145110957 145111088 131 TTCTTTGTAGATTTAACCCACCTAAAAGAACGAAATGTTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATGTA-GGTTACTTTACAATTTTTGTT chr4 + 94230402 32141153 32141152 32141281 32141153 32141152 32141281 129 TTATTTGCAGACTTAACCCATCTGAAAGAAAGAAATGTTGAGGACCTTTCAGGAGGAGAGCTTCAGAGATTTGCTTGTGCAGTTGTTTGCATTCAGAAGGCTGATATGTATGTTTAATTTAC---TTCTGTT ..x....:...:........:..:......x..........:..:...............:.x.................x..:........x.....:...........-.x...x.....---..:.... 110M1I11M3D7M 111/128 86.7% 129/94230402 0.0% 4/128 3.1% 112969805 77244750 +7657 chr4 + 190214555 145112217 145112216 145112335 119 TTTTTTTTTTTTTTTTTCATAGTTTCATGTTTGATGAGCCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGATAGGTAAGTA chr4 + 94230402 32142023 32142022 32142141 32142023 32142022 32142141 119 TTATTCTTTCTTTTGGGGTTAGCTTCATGTTTGATGAACCTTCGAGCTACCTAGATGTCAAGCAGCGCTTGAAAGCTGCCATTACTATTCGATCCCTAATAAACCCTGACAGGTGAGTA ..x..:...:....xxxxx...:..............:.....x..:....................:..:..:.....:........x.....:........:..x..:....:.... 119M 97/119 81.5% 119/94230402 0.0% 0/119 0.0% 112970194 77244361 +9897 chr4 + 190214555 145117249 145117248 145117420 172 ATAGTTATGTAAGAGTTTTAACTAAAA-------TCTGGTT-TGATTTTCAGATATATCATTGTGGTGGAACATGATCTAAGTGTATTAGACTATCTCTCCGACTTCATCTGCTGTTTATATGGTGTACCAAGCGCCTATGGAGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGTAACT chr4 + 94230402 32142399 32142398 32142578 32142399 32142398 32142578 180 ATAAGCATGTTTGAGGTTGAAGTATAAAACTCTCTCTGACTGTATTTTTCAGGTACATTATTGTTGTAGAGCATGATCTGAGCGTGTTAGATTATCTCTCTGACTTTATCTGCTGCCTGTATGGTGTGCCAAGCGCTTACGGTGTTGTCACTATGCCTTTCAGCGTAAGAGAAGGTAATT ...:x:....xx...x..x..x..x..-------....::.-.:x.......:..:..:.....x..:..:........:..:..:.....:........:.....:........::.:........:........:..:..x.................:..:..............:. 27M7I7M1I138M 137/172 79.7% 180/94230402 0.0% 8/172 4.7% 112974850 77239705 +3173 chr4 + 190214555 145118226 145118225 145118287 62 GTGACAGGTTTTTTGGTTTCTTTCTTTCTTTTTTTTTTTTTTAATCTTGGAGGAATCTTTTT chr4 + 94230402 31877399 31877398 31877454 31877399 31877398 31877454 56 GTAAGAAATTACTTGGTTTCTTTCTTTCTTTTTTTTTTTTTTGATTT------GATCTCTTT ..:.x.::..x:..............................:..:.------:....:... 47M6D9M 46/56 82.1% 56/94230402 0.0% 6/56 10.7% 113240827 76973728 +17140 chr4 + 190214555 145119917 145119916 145120159 243 TTTTCTTCCCAACAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAAAACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTATGTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAATTTGAGCTAGCAATTGTAGCTGGAGAGTTTACAGATTCTGAAATTATGGTGATGCTGGGGGAAAATGGTAAGT chr4 + 94230402 32142747 32142746 32142989 32142747 32142746 32142989 243 TTTCTCTCTTTGTAGGCATAAACATCTTCTTAGATGGCTACGTTCCCACTGAAAATCTAAGGTTTCGAGATGCATCTCTGGTATTTAAAGTGGCTGAAACAGCTAATGAAGAAGAGGTTAAAAAAATGTGTATGTACAAATATCCAGGAATGAAAAAAAAGATGGGAGAATTTGAACTATCCATAGTAGCTGGAGAATTTACAGATTCTGAAATCATGGTGATGTTAGGGGAAAATGGTAAGT ...:::..::x::............:..:..:........:.....x..x.....::.:..:..:x..........x..x..x..............:.....x...........:........:...........:.................:.....:..............:...x.x..x...........:.................:.........:.:................ 243M 205/243 84.4% 243/94230402 0.0% 0/243 0.0% 112977170 77237385 +8880 chr4 + 190214555 145121172 145121171 145121399 228 AGGAACGGGTAAAACGACATTTATCAGAATGCTTGCTGGAAGACTTAAACCTGATGAAGGAGGTAC-ATT---TGTAACTGTTGAGTCTTTTTACTCTGTTTTACACAGTAAACTTTAAAGATCTGGGCA--GTTTTTAGTGTC-TTATGTATTTCATTATTTTGCAGGAGAAGTACCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATTAGTCCCAAATCAACTGTGAGTTA chr4 + 94230402 32143430 32143429 32143641 32143430 32143429 32143641 212 AGGAACTGGCAAAACTACATTTATCCGAATGCTTGCAGGAAGACTTACACCTGATGAAGGAGGTACTACTTAATACATCAGTTGAAACT-----------------------ATGTTGAAGATATGGGAAAGGCTCTTGTTTTCATGATAAACTTTATCTTTTTGTAGGTGAGGTCCCAATTCTAAATGTCAGCTACAAGCCCCAGAAGATCAGTCCTAAATCTACAGTATGTTA ......x..:.....x.........x..........x..........x..................-.:.---.::.x.x.....:x..-----------------------.:x..:.....x....x.--.:.:..:x.x..-.x..:x.:..:..:x.....:...x..:..x...:.............:..:.....x.....:..:.....:.....x..x..:x.... 66M1I3M3I16M23D18M2I12M1I90M 160/205 78.0% 212/94230402 0.0% 30/205 14.6% 112977742 77236813 +24904 chr4 + 190214555 145123017 145123016 145123606 590 ACAGGGAAGTGTTCGCCAGTTACTACATGAAAAGATAAGAGATGCTTATACTCACCCACAATTTGTGACCGATGTAATGAAGCCTCTGCAAATTGAAAACATCATTGATCAAGAGGTACT------TTAACATAATTTTTTTTATTTTTTTATTATTTT----GAATTTTGGATGCCTTTACATGGTTTGCTAAACTCCTCCAATTAGGTGCAGACATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTTTGCTTGGGCAAACCTGCTGATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGACTGATGGCAGCTCGAGTTGTCAAACGGTAAATATCTTGCTCCTAGCCATATTTTGATTATGTATACTGTCCTACAAGTGTGCTTAATATAACAGTCGAATGTTTTATGATAGAAAGCTATAAGATTTCAAAATC-----ATTGTGTTTTAGTTTCATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCGGATCGCGTCATCGTTTTTGATGGTGTTCCATCTAAGAACACAGTTGCAAACAGGTAAAA chr4 + 94230402 32143794 32143793 32144350 32143794 32143793 32144350 557 ATAGGGAAGCGTTCGTCAGCTACTGCATGAGAAGATAAGAGATGCCTATACCCATCCCCAGTTTGTAACTGATGTAATGAAACCTCTTCAAATAGAAAACATCATTGACCAAGAGGTATTAACAGCCTAAGAGAATATTGT--AATTGTTAAGCATTAAAGAAGAAATGTGGCTCACTTT---------TCTCTCCTCCCCTTACTAGGTTCAGACGCTGTCTGGTGGTGAGTTGCAGCGTGTTGCGTTAGCTCTTTGTCTTGGTAAACCTGCAGATGTCTACCTAATTGATGAACCTTCAGCGTATTTGGACTCTGAACAACGTCTAATGGCTGCTAGAGTCATGAAACGGTAAA---------------------------GTGAAGGCAGTGGGGAAAGTG--CTTAATATT---TTCAGTAGTTCTACAGTAAAC-----TTAAATTCACATCTCTCTCAATTCTATTTCAGTTTCATTCTCCATGCTAAAAAAACAGCTTTTGTGGTAGAACATGACTTTATCATGGCTACATATCTTGCTGATCGCGTGATTGTTTTTGATGGTGTTCCTTCCAAGAACACAGTTGCAAACAGGTAAGA .:.......:.....:...:....:.....:..............:.....:..:..x..:.....:..:...........:.....x.....x..............:.........:.------:...x.x...x..x.--.x..x..x.x:...xx----...x.x...x.xx....---------x..xxx....:.:x.:.....x.....::.:...........::.:.....x..x..x.....:.....::.x..:........x........::.............x..x..:........:.....:...x.x..:.....x...x....::.x..........---------------------------:..x.x:.x..xxx:x.....--........x---x..::xx...:..:::..:.x-----.x.:...:xx.xx..-----...x.:...:........x........x.....:.....:.....x..:...........:........:..x.....x..x........x..:.................x..:........................:. 120M6I15M2D16M4I17M9D167M27D21M2D9M3D21M5D15M5I141M 420/542 77.5% 557/94230402 0.0% 63/542 11.6% 112979223 77235332 +8839 chr4 + 190214555 145124981 145124980 145125171 191 TTCTCTTA---GTCCTCAAACCCTTTTGGCTGGCATGAATAAATTTTTGTCTCAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGGCCACGAATAAACAAACTTAATTCAATTAAGGTATGTAGAAAAGTTGTCTTA-AATCATGGATTACTGAT--CTCAGTATAAACACTTGAAAGGCTATTTAAAA chr4 + 94230402 32145341 32145340 32145526 32145341 32145340 32145526 186 TTCTCTTAACAGTCCTCAGACTCTACTGGCTGGAATGAATAAGTTTTTATCTCAACTTGAAATCACTTTCAGAAGAGATCCTAACAACTACAGACCAAGAATAAACAAACTCAATTCAATCAAGGTA-----AGAAGCACTTTTACAGTGATGGAGCCGTGACTGTTTAATGTAAACCCTGGG------ATTTAAAA ........---.......:..:..x:.......x........:.....:.....:........:..x..............x........:..:...x.............:........:......-----.:...:xx.:...-.:.x.....x:xx...:--:.:.:.:.....x..x.:------........ 8M3I116M5D13M1I17M2I18M6D8M 145/180 80.6% 186/94230402 0.0% 17/180 9.4% 112979640 77234915 +3581 chr4 + 190214555 145125911 145125910 145125983 73 TGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTCAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........:.::........x.xx.x...x.....x.......:..x.xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 69092706 NA +8154 chr4 + 190214555 145127504 145127503 145128037 534 TGGCTTCTGTTTTCTTTTTTAGGATGTAGAACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG--ACTGACTCTGAGAATA-TTGATAAGCCATTTATTAAAAGGAGTATTT-ACTAGAATTTTTTGTCATATAAAACTTGAATCAGGATTTTATGCCCCACATACTCTGGAACTTGAAGTATAATATACTTAATATAACATAAAAAGCCAGTTG-GGTTCTAAATTGTAGTTGAAACACAGAAAATGCCACTTT-TCTGTTCC--TGAAGAGGCTCTTTTGT--GCATAATATTCTAAAATGAAGACATTTCAAGCTATACAAATTACTTCCAAG--TTTTCATGATGTATGGGAAGATTTTCAGTAGGTGTATTATATTCACGGTACCAAATGCTGACCAGTGTTGCTCCATTTTTTAAATCTTGAAAAGGGTTTCTGTACTTACCTGG---TTTGCCAAGTATGCCAGTGTAATGAAACTGCCCTTATTTTAAAAGCCAGTCAAAGATTCCACTGATTGACATTTGATAAATAAACATC chr4 + 94230402 32145687 32145686 32146222 32145687 32145686 32146222 536 TGACCTTTTCTTTCTTTCCAAGGATGTGGAACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGACTAAATATTGAATCTGAGCATCTTTTGTAATTGGCCCATAGAAATGCATATTCAAATCAAATATTGATGGATAAGAAGGCTCGATTGGGTTTTAGAACAATTCATTTTTTGGAGCTTAAATC----TGTGCTGCGTGTAACATCTGAGACCAATAGCAGTGTAAAAATGTAGTCTGAGTA---AAACTGCCACTTTCTATATTTCGGTGACACAGCCCTATTTCCAGTATTATAATTCCAAACAGACCATCCTGAAATTGTGCAAATGAGTCTCCAGCTTTTTCAAAGTTTCCAGGCATTTTTCAATTCCATCTATTCTACTCAT-GTACCAGGTGCTTATTGGACTT-CGGAATTTTTTAAAATCATTGAAGCTTTTCTGTAC-AAGATGGAGACTGACCTAGAATGTCAAGATACAGAAGATCCTCTTATTTTAAAA---AGGCTGAATCTCTCTGTATGAGGGTTTCATAAATAAATATC ..:.:.:.x:.......::x.......:......................................:..:--.:...x......x..x-..x:...x:x::::..x:...x.x:....:-.x.x:...x..xxxxx...x:..:x:.x:..::..x...x:x:.xx:x...x:.:....:...:..x:----.:.:..xx:.:......xx:.::...:.x.-:..x:x...x......:x:.::.---...x.........-.x.:..:.--...x:x:..:..x..x:--.:..x...x.::x...:::.xxxx::.x..::.:.:.....x.x.::.x..--......x::.x.x::..x.xx...:x.x.xx:.x....x..:...:-......::....x.:::.xx..-.xxx..........x::xxx:...xx.........-x.xx...---:.x:..x..x...:..:x:..xx...:x.x.:............---..x.x:.:x:..:x:xx..x::x:...x.........:... 70M2I16M1I30M1I68M4D30M1I23M3D13M1I8M2I17M2I51M2I46M1D22M1D35M1D7M3I44M3D41M 321/521 61.6% 536/94230402 0.0% 28/521 5.4% 112981817 77232738 +65732 chr4 + 190214555 145136002 145136001 145138668 2667 TTTTGGCTAGGTATATTACACATGGCATGCA----AAGAGAAATTACTACTATGTTATTTGCATAGCACTCAAACTTCCTGATCAGAAGATAATCTCAACATAATAAAAGAGTGGATTTTCACATTGGTAT--GCACAAATA-AAGAATATAAGCTACAGTTATTTTTACAAAATAACACAGATGAATGAATACTGTG---TTAATTCAGAGTTC----------AATCTCCAAATGAGAACAGAGTGCAACATGCAAAGGGAACCTCTAGTGAATACTGCAAAGACTGGAAGAAAACAGAATGTAAGATGTTACCTACCTAAGGGTAACAAGCTATAAAATACAAAGCAAAA-CCATTTTCTAGCAGCATCCTCTAGAAAAGAACTAGAAGTCACAAT---CATATTATCTTCTATACAATAGTTCCAGCCCTGACAAGTAGAACATGCAAGTGTAAAGTGAAAGTGATACACAACCAATGGTGCGGGGGGGGGGGGGAGGAAGAAAA------CAACTCTAGAAACCTGTCAAGCTAAAAA---------TTTTTAACATTTCTTCTCACAAAATATTTAGAATCTGTCAGTGCATTAGTGTTAAAGTGGCATTAAAAAAACTTCTGCAGTTCTAACTGATGCAGA-TTATTTTCAAAATGCATAGCATCTACATT------TCTTTC--------------GAGTAGGCACCATGATATTTACACCAGTGCTAAGAATTCTTGGTGGAAACAGCCATT-TCATTGGAT-------------TTCCTACTATTCTTCTATGCAATCTCAACAAATA--------CCAAAATTCAAAAATATACCTTATGAATATTAAAAGAACTATATACAACATTGCTAAGACACAGTT----AATAGGCTGCCTTATGTGAATATTAAAGAGAAGACATTATTCAAGTTTGACAGATATT-GAGATGAAAGGCCTTTGGGTTGGAAGCATTTTAAAAGACAACAGTGTTTTAGGCTGAGAATTGTTTGAGCCCAGTTTATGACTAAGGCATTGCATAATAAAATATACATTTCTATTTGGTGCAACGTTAT------GTTTGGAATCTATAGTGTGTCAAATGGTATATTTTCTTGTCACTTTAGTAAACACTATAAAGCACACATTTCCAACATCTGAAATCAAACTTATAAACTTATAAGGAAAAAAGCCAAACACTAAATCTATAATGTTTTATATTAAGCTGTTTATAAAAAATACTTTAACAAACTTATCTTCTACTTTTTACGGGGACAGTCACTTGATCAACAAA--CAGATTCTGAATGAAGAAAACTGGCAATGCCAGGAATTAACCTGCCCCCTTGAACTCATGTCCAAAATGTCTTGTCCAGTATGGGAGTGAAGGTAAGGGGGGCTGGGGAGAGGAAAGAGTTCCAACTGCGGTTTTTACTTTATTGTATTTTTTTTAAAGCCTTCAGAAACATTCCACCTAAGAGTTTCTGTTAGAAAATACTTCGGCAACAACCATCAA------GTGTGCTGTCCCCTATGGCCATCTCCCATCCCTGATCTCCTCCTATCTCCCCTAAATGGTCGCCCTCTGACATTTCGATGGTACTGATAACCTTCATCCCGACTTCTGCTTGGCTGTCCTTTCCAGGACTCCTCACTTCTCACATGTTGATATCCACCCCTACCAGAATAGCCCCAATCACTTTTGTACTTCCTGCTTCC---ATAAGTTTGATTATAGAACTGCTTGGATCTACCACTTCTCAAAATATTAGACACTTCATTTTCATCTTCTGAACTCTCTTCTTTTGGTCTTTGCACTCTGCTATCAACAGAGTTGGCCCCAGGGCTGACCACATCAGCAGCAGTCTTAGGATCTTTTACTTTTTCTGTTTTTTCTTTCAGGCTTTGAATGGTCCTTTTAGGTTCAAGTT-------------CAACAGG-----------------CACAGTTTCTCTCTCTCTGTTTAGAATCTGAGTGGGAGGATG---------AGCCTTTCCCTCTGCTACAGGAGGGATGGAAGCCAATGCCGTATCTGCCTTTCGTG-TCTGG--GAAGATTGCTCTGTCCGGCCTTCGTCCGGCTTACTGCTCACACTTGCTTCAGGGAGAGA----ATGTACATGTTCACCCCTG-------GCTTCTGGAA-------ACTCA-TCTACTGTTGAAACTGAA---CCACAATCTTTAGACAGATCCAGATTTTCCAGAGACAGATCCAATTCTCCTTTTTCATCAGAGGGCAGGACAATATTCTGCCTCATTACTGGATTTTCTATGAATCCCTGAAAAGGGTACCCATACCAAACATGAGGAAAGAAAGGAGGTGCAATAGGAACTGGGCCTAAGAATGGATTGGGTCCAAAAGATGGCTGGGGGAACATATTCTTGCCACTTAGTGACTCTTCATAATCAGCATGCAGAAGCTGCCCAGGGGTCTCAGATTCAAGATCAGCCTGGTAAGACAATTGTCCATGACTTTCAGACACCTGAGATGGAGGGATAACCAGAGGTGAAGAAAATGTCGGCGGTCCAATCTCTGGCTGTGGCATTTGACCATTAACACTGGCCTCAGTCTGCATAGGAAAGTGGGCATCAGTACAGGTACA----ATCACTTTCATTCTGAGCAGCAGGAGCCTCTTGGAACCAGGGATTATGAGGATAAACAGGGACAGGGACCTTTGGGTACATCCTGCAGGCTGCCAGGTAGGCCTGGTGCAGAGGGTACAGGTAAGAATGTGGGGCCCACATAGGACAACTGTATGCCTG-AAGA-GACAAAAAACA chr4 + 94230402 32147149 32147148 32149746 32147149 32147148 32149746 2598 TTTCAATTGGGAGTTTTATACATCACATGCATCTGGAAAGAAATCATAACTAT-------------CACGCAGGTTTCCTGAT-AGAGGGTGTGC---------------AATCACCTCTGACGCTAGTATTTACACAGATATAAAAATATACACAACA--CAATTTTACAGAG---CAGAGCTGAGTGAACACTGCACACTGCACTCTGAGTTTGGATAACGAAAAGTCCCAACTGGAA-----GAGCAACA-GCAAC----ACTGTGAGAGATCATTGAAAGGGTCTGAA-AAAACAGCAT--CAGATCTCCGATAC---AGTGTAAAAA-----------TAAGGCAGAAGCCGTTTTCTTCTGAAGTCT----GAGGAAGAGCAGAACACAGACTATCCATCTTG-CTTTTAAAAAGTAGTTCCAACAGTGA---GTTGTACATGCAA----AACATAAATTTGC------ATCAACAGTGCAATAACAAAAAGAATACTGAACAGTAGCTCAACCATACAAACTTAAAAA---AAAAAGTAACGTACTTTTATGCATCTCTTCTCACAAAATATCTAGGATTTGTCAGTGCATTAGTGTTAAAGTGGCATTAAAAAAACTTCTGCTACTGTAACAGATGCAGAATTATCTTGGAAATGCATAGCATCTACATTGTATTGTCTTTGTCATTGTTTAGTTGGCATAGGCACCATTCTACTCACACCAGCATTAATAATTCTCGGTGGAAACAGCCATTCTTACCAAATCGTACACAGCTACTCCTGACTGCTTGTTTCTG--ATTTCCTCAAATAAATGCTTTTTAAAATTCAAAAATATACCCTATGAATATTAAAAGAACTATATACAACATACCTAAGACACTGTTTGTTAGCTGGCTGCCGTACATGTAACACACAGGAGAGAAAC-ATTCAAGTTTGACAGATTTTTGAGATGAAAGGCCTTTGGGTTGGAAGCATATCAAA-GACAACAGTGCAGTAGGCTGAGAATTCCTTTAGCTCAGTTCAGAACTAAGGCATTGTATGTTAAAATATA--------TTTGGTGCAATGTTACCATCAATTTTAGAATCTAGATCACATCAAATGCTGTAATTT---GTCACCCTAGGAAACAT------------ATATCCA---TCTTACGTCACAAACTCAAACCTTTGTGGAAAAAACTCAAACACTAAACCTATATTGTTTTTTTCTAATCTG------------------ACA----------------TTGAGGGAAAAAATCACTAAGCCAACCAAACCGCAATCTCCACTAAACAAAACGATAGGAGCTCAAATTCTCGTAGTCTTT---ACTCA---CCGAAATTTCAT-TATATCCTTGGACT--------------TTACTAAAAGGAAATATTAAGATTTTAGACTTCTACCTCAAACTACCTTTT-----GCATTTGAAAACTGTCAAT-------TATCCGTT-----------------CATCCATTCATTCTATGCTTGATGTCCCCTCTGATTATCTCCCAGTGTTGCCCTTCTCCTGTCATTCCTGTATGGCCTACCTCTAAAGTTTCGCTGGTACTGGTTGCCTTCATCTCTGCTTCTGCCCGGCGGTCCTTTCCAAGCTTCCTCATTTCTTGGGAACTGGTATCCTCCCCTACTAGAATAACCCCATTCCATTCTCGGCCTTCTGCCTCCTCCATAAGTCTGGTTATAAAACTGCTTGGATCTACCACTTCTCAGCATATCAGAAACTTCATTCTCATCTTCAGAGCTCTCTTCCCTCACTCTTTGTGCCCTGTTTTC--------TGTCTGTAG----------ATTACCAGCACCCTTGGAATCTCTAACTTTATCAGTCTTATCCTTACGACTGTGAGCAGTGTTTTTCAGTTCATTTTTTGGTGGTTCTGCCAACGGCAGTGTGGTGTTGGGCACCGCCGTCTGCCTCTCAACCCCCTGTATTTGTGTAGAGCGATTTTGCAGCCCAGCTGTTGCCTGCTTAGCAGGAGAAGCTGAAGTACAAGTTTGCTCCAACTGAGGTGCTCTAGCTGAAG-TTTCTTTGGGGGCGCTGCATTCG-----CTGCTCGCACCAGCCACTGGGAACGGTATGGTGTTTGAGCT-ACTGCTGCTGTTAGTCTTCTGAAGCTGTTCTACACAGTTTACTGCCGGAACTGGAGCACCGCATTCTTTAGCCACGTACATGTTTGCAGATGTGCTACTTGTTGCATCTTTGTCCTCAGGTGCCATGACAACGTTAGGTCTCGCTACTGAATTTTCAATGAAGCCCTGAACTGGGTACCCATACCAGAAGTGAGGAAAGAAAGGAGGCGCTATTGGAACAGCACCTAGAAAGTGACCGTGTCCAAAAGATGGTTGTGGGAATATGTTTTTCCCCCTCAGGGGCTCTTCATAGTTTGCATGAAGGGCTTGCACTGAATTCTCCGATTCGACAC------------GGAGCTGTCCTTGACTTTCTGACACCTGAGCTGCAGGTACGATCAGTGGCAGCGA------CGGCGACCTGCTGTCAACCTGTGACATTTGACCATTGGATCTGGTCTCACTCGGAATAGCGAAGTG----CCTGTTTGGTTGCACAGTCTCATTTTCAATCTGCGTCGGTGGAGCCTCCTGGAACCAGGGATTGTGCGGATACACGGGGAGGGACATGTTTGGGTACATTCGACAAGCAGCTAAGTAGGCCTGGTGCAGAGGGTACAGGTAAGAATGAGGTGCCCACATGGGACAGCTGTATGCCTGCAAGATGATAAGAAACA ...::::.:..x:.x...:....x:......----:.:......:.:x.....-------------...x..:::........-...:.:.:xx.---------------.:.x:x:.:.x..::.:....--:....:...-..:......x:.x...--:.x.......:.:---..x..x...:....:....::---.xx.:..x.....:----------..x::....x..::.-----.x......-....x----..:x:x..x..x:.:..x..:.:::x...-.......x..--x....x.:xxx...---..x....x..-----------:..:...:..-..:......xx:::x:..:----..::.::.x:....xx..x.x.---...x..:-...:..x.x.:........:.xx...---..x.x........----..x:.:..xx..x------.:...::....::x::x:::::.:.x:xx...x.------....:x..x....:.:xx..---.....---------....xx:...:................:...:..:...........................................x::.x....x........-....:..x:....................------.....x--------------.x:..........xx..:.:.......:::...x......:................-.:.::::..-------------.:.:x...::.:x.:.x..--..:..xx......--------::..................:..............................xx.........x...----.::x.......x..::..x.xxx:.x..:::...x.:-.................x..-.............................x.:...-..........:xx.............x:..x...:.....:.x:............:..:x.........--------..........:....:------x...:.......x.x::::.......x.:..x...---.....::...x.....:------------..x....---...x.x:...x.xx:x:....:.x.:x........x:...........:.....x......x.x:...x...------------------...----------------..x.x..::.x.:.....x:::....x..--.:x.x...xx.:x..:x...x:.::.:x:x.xx:....xx.x.:x:.::.---.....---..:....x..x.-.x:.x:x.x...x.--------------:.:xx:.:......x.x.xxx.x:.xx.::..:...:.:.xxx..::....-----..x..:::....xx..x.:-------.x..:...-----------------..x....:x.------.:x..x........x..:::........x:x:..x:..:.....:..x::...:x....:.xx.....:.x:.....x........:.x:........:.x:.......::...x..........:.x:......:....::x:x::..:.....x.......:......:.....x..xx..:.xx:.:.:....:...---......:..:.....:.........................:x....:...x........:........x..:........::.::x......::.:...:.x..--------..x.:x:..----------..:.x.....x:...:.:....:.x.....x..x..:..x..:..xx.:..x...:::..x:....x:.....xx..-------------....:.x-----------------.:.x..:.x:.....xx:x:::x.x..:..x..:.::x...x---------...:x..x...x:x:x:......::::x....:xx.x.::xxx..::x..xxx...-...:.--....-..x..:..xxx.xx..x.:.:..-----......:...:x..:x.x....:x.:----:...x::x.:.-..:x...-------x......:.:-------..x..-.:.....::.:.....:.---..:..x.......x..x:.x..x:...x.x::x.xxxx.::::x.x.x:....x..x....:x.x..x.....::..xx.:...::.....:......x.....x.......xx..............:.x:.................:..x..x.....x.x:....::..xx..::.x.............:..x.....:..:..:..x..x..:..x.:.........:.:x.....x..::x:...x.x.::x....x.....:.x.:------------:x.::.....x........x..........x..x...x.::.:...x..:::x..------.....::.::x.x..x:x.....:............::xx....:....x..x.x....x:.....----:.x..x::.x.:..----x...:.....x....x.:x.xx........:..............:..x.....x..:....x:.:x.:x...........:.x:..:..x..:.:.................................x..x........:.....:...........-....-..:..:..... 31M4I18M13D17M1D11M15D21M2I9M1I16M2D13M3D21M3I14M10I15M5D8M1D5M4D29M1D10M2D14M3D10M11D10M1I19M4D22M3I7M1D26M3D13M4D13M6D34M6I20M3D5M9I96M1I29M6I6M14I57M1I9M13I19M2D13M8I66M4I37M1D20M1I35M1D70M8D16M6I35M3D17M12D7M3D72M18D3M16D29M2I50M3D5M3D12M1D14M14D51M5D19M7D8M17D10M6I200M3I105M8D9M10D77M13I7M17I42M9I56M1I5M2I4M1D23M5D26M4I11M1D7M7I10M7I5M1I18M3I274M12D55M6D66M4D14M4I159M1I4M1I11M 1700/2424 70.1% 2598/94230402 0.0% 417/2424 17.2% 112988853 77225702 +4369 chr4 + 190214555 145139910 145139909 145140003 94 TAATGAATAAAATAACTTTTAAGATGATAAAATGTAAATACCTTCACACCAAGATTGAAGAAGAATCGAAGAATATTCTTATCTAAAAATAAAA chr4 + 94230402 32151123 32151122 32151211 32151123 32151122 32151211 89 TAACAAATACAGAAACATGCAAGTTTGAAGAGT-----TACCTTCACTCCAAGATTGAAGAAGAATCTAAGAATATTCTTATCTATAGACAGAA ...::....x.:x...x.x:...x.x:x.:.:.-----.........x...................x.................x.:.:.:.. 33M5D56M 69/89 77.5% 89/94230402 0.0% 5/89 5.6% 112988787 77225768 +14569 chr4 + 190214555 145141374 145141373 145141642 269 CTCACCTTTAGGTAGGTCCTCCCCAGTCTGACACAGTGAATAAGGTGGTACAATGGCTCGATCTCCCTTTTCATTACAAGGAAACCCAGGATAGAGTGGGTCTTGATAAAGGCTCAATGTCTGAGGCAAAGGCATCAAGGGCTGGTTAACTGCCTGTATTGACACAGG---------AACTGGAGAGGGTGTTAAATGAGCTTGGGATACAGCTGAATCAGGTCCAGTGGTCAAAGTCTGTGTCACTGACAAAACGGGAATTGGAGCAGGGACACCTA chr4 + 94230402 32151959 32151958 32152236 32151959 32151958 32152236 278 CTCACCTTTAGGTAAGTCCTCCCCACTGCTGCACAGGGAGTAAGAGGGTGCAATGGCTCTTTCTCCCTTTTCACTTAAAGGGAATCCAGGATATAGTGGATCCTGATAAGGATTCAGAGTCTGAGGCAAAGGCATTAAAGGCTGGTTAACTGCTTGTATCAACACAGGAACTCCAGCAACTGGAGCAGATGTTACCTGAGCCTGCGATACAATAGAGTCAGGTCCCGTTGCTGGGGCTGGCATCAACGAAGAAGCAGGTATTTGGGCTGGAATACCTA ..............:..........x.x:x:.....x..:....:x...:.........xx............:.xx....:..:........x.....:..:......:.::...:x.................:..:..............:.....::.......---------........x:.:.....xx.....:..x......::x..:........x..x.:::::.::x.::...x:..x:..:.:..x...x.:..x..:.:..... 168M9I101M 203/269 75.5% 278/94230402 0.0% 9/269 3.3% 112989415 77225140 +6582 chr4 + 190214555 145142182 145142181 145142308 127 AACCCTTCTCTAA-CCTGTTGGTCCAAAAGTTGTAGGTTCACTTGGCCAGGCTGGCACAGTGGCTGGTAAAGAAGGCACCGCAGGAGTTAGATGTACCTCTGGAGAAACTAGAAGGGGAGCTGGATTT chr4 + 94230402 32153271 32153270 32153398 32153271 32153270 32153398 128 AATATTTCTCCAAACCTGCTGGTCCGTAGGTTGTTGGCTCACTTGGCCAAGCTGGCACAATGGCTGGTACAGAAGGCACTGTTGGAGGCAAATGCACCTCAGAAAAGACCGGTGACGGTGTTGGAGTT ..:x:.....:..-....:......:x.:.....x..:...........:.........:.........x.........:.:x....x:.:...:.....x.:.:.:..::.x::x..x.:....x.. 13M1I114M 94/127 74.0% 128/94230402 0.0% 1/127 0.8% 112988911 77225644 +10241 chr4 + 190214555 145146258 145146257 145146445 188 CATACATACGGAAAGGGCTGGGAAAGCCTGTTCATCTCTGTTCTGAATCTCATAGAGTAAACGGGATTCTTCTATAGCTTGCTTCTCTCTGCGCTCTTCTGGGGAAAGGCCGAAATAGTTAGATTCTCGACTTGTGTGATCAAAATCCTCAACTCTTTCACGATCAGGTTTTCTGTCAAATAAAACAT chr4 + 94230402 32157516 32157515 32157702 32157516 32157515 32157702 187 CATACAT-TGGATAGGGCAGGAAAAGCTTGTTCATCCCTCTGCTGGATCTCATAAAGAGAACGGGACTCTTCTATTGCCTGCTTCTCTCTGCGTTCCTCTGGAGATAGGCCAAAGTAGTTACAGTCTCTTCCACCATGGTTAAGATCCTCAGTTCTCTCACGGTCTGGTTTTCTATAAGGAAAAAGAT .......-:...x.....x..:.....:........:..x.x...:........:..x:.......:........x..:..............:..:.....:..x.....:..:......x.x....xx.:xx::..:.:..:.......::...:.....:..x........:.x.::x....x.. 7M1D180M 143/187 76.5% 187/94230402 0.0% 1/187 0.5% 112988742 77225813 +11200 chr4 + 190214555 145150509 145150508 145150922 414 TTACCTTATGATCTGTGAAGGTGTCCGGCTAAGATTTTTGTGCTCACTGGAGAATTTCTGAGACTGTGACCCTGAAGAATGACTAGAGAACGCATGTTGTCTTACTCCTGAAGGATGCTGCAGTCGAGGAGGTAGTGCTGATGGGGCTTTTATTGGCTTGCTTGGATTCTTTGGCCCTCTGTAATCCACATCTGTTGTAAGAACCCAAAAGTAC----ATGATAATATTCATATTAT--AAACAATCCCAAGTACCATCATCCCAATCCCAAAGGAATGATAGCTTGATGTGCTCCTACCAGAATGGAAATTTTGTCCAGAAGT---GGAAGGTTTTTTCATCTTCTTCCCTGACACTGTGTTCCAGCTTTCTGGGGGAGGTGCC------------TTGAGGTTCTTTGAT------GTGTGCCTTCAAAGGGGAAAAGA chr4 + 94230402 32158761 32158760 32159186 32158761 32158760 32159186 426 TTACCTTGCAGCTTGGGAAGAATTCCTGCCTGGAGCTTTTTGCTCAGTTGAGGTCTGATGAGGTTGAGGCCCAGAA------CATACGAACTGATGCTGCCTGGTTCCCACAGTATGCTGAAGTCGAGGAGGTAGTGCTGACTGGGGTTTTATTGACTTGCTCTGATTCTTTGGCCCTCTGCCATCTGCATCTGTGATAA-ATCACAACATAACTCATTTATTATTTTTCATCTCTTTGGGATAAAACACACGACAAAGATTCCG---CCACAGAAA-GACA----GGTATAGTCCTACCAGGCTGAGCATTCTGCCCCCATGTTGGGAAAAACTTTTTCATCTTCTTCCCTGGCACAGTGTTCCAGCCCTCCATAGGAGAGGCCTGTGGAAGAGGTTTAAGGCTCTTCAGTGACACAGAATGCCTACAAAACAGGAAGGA .......::::::..x....:xx...x..:x:..x:...x......x.x...:x:.xx....::..x.:...x...------.xx:x....xx...:..:..x::...::x..x......x....................:x...x........:......:x.................:x...::.......x:...-.x.x...x.xx..----x.:x..x.x.....x.:x.--::.:..xx.xx.xx..x.xx..:..:---...x..:..-..:.----.:.:.:x.........:x..::x...:..:..xx.x..---.:..:::...................:...x..........::..::x:....:x...------------..:...:....:::.------.x:.....x....:x:.:..:.. 76M6D118M1D13M4I19M2I26M3D9M1D4M4D38M3I58M12I15M6I23M 271/399 67.9% 426/94230402 0.0% 42/399 10.5% 112991748 77222807 +5482 chr4 + 190214555 145152532 145152531 145152670 139 AGTACATACTTCTTTCCCAGTTCTTCAACCAA------AACTGGTCCATTCTCAGAATGAATTCCTTGAACATCTGCATTCAAAAATTTTCCATTGTGATCCAACCTAACCTGTTAAAAATTCCAAAAATGAAAAGGAAAAAAAA chr4 + 94230402 32160218 32160217 32160360 32160218 32160217 32160360 143 AGCACTTACTTTGCTCCAAGCTCTTCTACAAATACAACAACTGGCCCATTCTCAGAGCAAACCTCTTGAATATGGGCATTATAAAATTTCCCATTATGGTCTAAGCGCACCTATGGAAAAAT--AAATAGAAAAATGAATAAAGA ..:..x.....:x:...x..:.....x..x..------......:...........:::..:::......:..xx.....xx.......:.....:..:..:..x.xx....:.x:....x.--...x.x:....x...x...:. 32M6I84M2D21M 99/137 72.3% 143/94230402 0.0% 8/137 5.8% 112992314 77222241 +7041 chr4 + 190214555 145155358 145155357 145156027 670 GAAAAAGCAAAGTTTCAAGTAAAATCTCTTCTTCTTTTACA--------TAAGTCACTTACTTGACATTTGTCTCCAACTTCATATTGTAAGCCAGCAGCAATGGAATAATCACGTTTTTGCTGAGCTGTTAA------------------------------------AAAAAA-------------------------AAAGGTCAGTA-------------------------------------------------TAATATAAAGTTGACTTATTTTCAAGTGCTACAAAG----------------CAAATTTATGGAAAATGCAGATTT---------TTAACTCACCTTGTTTAGACTTCAGCCAAATTTCATATTCCACATTTCTATAGACTGCAGGATTGAGTGACTTAAGAACCTTTCTAGACAAAGGCAGGCTAGTAGAGTTCCCATTGTTCTTCAGCTGCT----------AAACAAAGTCAGGAAGT--CCAATCA-----------ACACATAAGTGCTTTTAA-----------AACATTTTTGTTTGAGATACACGTAAAACTAAAGTCAAATGAAGAAAAG--AAACTTCAAAAAATTAG--------------------------------GAAGCCACCAAATCAATTTCTGAGTAGATGATCCTG--------------------ACTTGACTG-----------AAATGTACCAGAAAA--------------AAGAAAAAAATTAAGATTTTAATGTACATGCTTTCTTATATTAAAGA----ACTACATTT----------AAAACCACTTTTAAAAA-----AAATACCTCATTGCCTGACAAAGGTTTAAATCCATTCACATCAGCAGCAGCAGCAGCAGTCTTACTCCTACAAAGAAAGATAACCATAATTGGGGCAG chr4 + 94230402 32161371 32161370 32162297 32161371 32161370 32162297 927 GGAAAACTGACGTATCAAGAAGACATTAATGTTCTTCTCAAACTGTAATTACGTTACTTACTTTACATTTATCTCCAATTGAGTATTGCATGCCAGCAGCAATAGAAAAATCTTGTTTTTGCTGATCTGTAAACACATTAGCAGTAACATACTGTTAGTTTAAATACACAAAAGAGTGACTTTATTGATACAGCTGAACTAAAAAGCAGTAGTCCAGGCCATTGAACCACACACTGACACATAAGAGGAAGACCACTGCTTAAAATGAAACTATCATTTTCACCACTGCTCAAAAAGGCTCTGCTTCCCAACTCAGCTTGCAACAGATGGAGCTGTGAGTTCGCAGTTACTTACCCCATTTGGATTGTAGCCAAACATCATATTCAACATTCCTGTAAACCAATGGATTGAGTGATTTAAGAACTTTCTTAGGCAG---------GGTGGGATTTCCACTGCTCTTAAGGTGCTGTATGAAACAGAACAAAGTGTTAAAGTGGTAAATTAAACAGAAGTTTACACTTACAGATTTTTAAGTCGCAGCATTAAGACTCTGAACTTAAATACAAA-AGAGCCAAAAATACATAAAGCATAGGAAAGCTTTGCAAAATTAATTCAAATGGTGTTCATTTCACCATACCAGAACAAAATTAAGAAATAAACAGCAGTACAAAGGACACTGTCCATCCACAATGAAAGCAAACATCACTTCTCAAAGCACCAAGTAGATTTGAAAATAGTACGTTTGTACAAGTAGAAATTCAAGATTATATCACAGACACTGACCAAAAGAAAAAATCAGAATACAAGTTAACAGGAGAAAAATAAATCTTAAATAATAGCAAATACCTTGCTGCCAGAGAGAGACTTTAATCCATTCACATCACCAACTGCTGTAGC---TTTACTTCTGCAGAAGAGAAGGAACA-----GAGGCAG .:....x::.x..x.....x.:.xx:.xx.x.....:.xx.--------..x..:........x......:.......:.xx:.....:.x............:...x....x:...........x....x..------------------------------------....:.-------------------------...::x.....-------------------------------------------------...x..:..::.:x.x.x..:x.x.x....xx...:----------------:x.::..::::x.:...x..x.x.---------x.x...:...:::...:..:.x:.......:x........x.....:..:..:..::xx...........:........:..::...:..:---------:..:.::..:...:..:....x..x....----------:........xxx:....--:x...:.-----------....x..x:x::......-----------..x.:.:.x:x:.x.:.....x:-.:.:.:...:x:.x..:...x.x..--..:...::x.......:--------------------------------:..:::.xx....x..:xx.x.x::.:.x..:x...--------------------..x.x...x-----------..:.:x.::x.....--------------...x.:...x.:......x..x:::.x.::..xx.:x.x.xx...:.----.x....xx.----------....:x.x.:.....x.-----........:::....x..x.:..::..x...............x..:.x..x.:...---:.....:..:..:.::.::.x:.x..-----.:..... 41M8I84M36I6M25I11M49I36M16I24M9I91M9D29M10I17M2I7M11I18M11I23M1D25M2I17M32I36M20I9M11I15M14I47M4I9M10I17M5I57M3D26M5D7M 431/652 66.1% 927/94230402 0.0% 293/652 44.9% 112993987 77220568 +3436 chr4 + 190214555 145155555 145155554 145155736 182 GATTTTTAACTCACCTTGTTTAGACTTCAGCCAAATTTCATATTCCACATTTCTATAGACTGCAGGATTGAGTGACTTAAGAACCTTTCTAGACAAAGGCAGGCTAGTAGAGTTCCCATTGTTCTTCAGCTGCTAAACAAAGTCAGGAAGTCCAATCAACACATAAGTGCTTTTAAAACATT chr4 + 94230402 13266986 13266985 13267159 13266986 13266985 13267159 174 GGTTTTAAAGATACCTTTTCTGCTGTCCAGCCAAACATCAAATTCCACATTTCGATAAATCTCTGGGTCCAAAGCTTTTAGCACTTTGTAGGGGAAAGGCATTTTCGAGGAATTTTC--TGTAATCTAG-----AAATAGAGTTGAAATGGACTATC-ATTTACAAGCACACTTAAAACGTT .:....x..xx:.....x.:.:xxx.:........:x...x............x...:.::x.x..:.:x.:x.x:..x..x..:..x:x:.:x.......xx:.x.x:..:..::.--...xx.::..-----...:.:...::::.x.xx.x...-.:x:.:...::.x:.......:.. 117M2D10M5D23M1D24M 105/174 60.3% 174/94230402 0.0% 8/174 4.6% 131888569 58325986 +3311 chr4 + 190214555 145158353 145158352 145158411 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x............ 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 69125147 NA +6370 chr4 + 190214555 145159499 145159498 145159638 140 TTACTTGCAACTGTCATCCTCTGAATCTGAT------ATTTCACTG------TTATCTTCATCAGCTACTTCCAACGTGTCTAGTTCCATCACAATTTTACTAACATCAGTTTTAAATACCTTCTCATACAGCAATTCATAAAGGAGAGCTG chr4 + 94230402 32163727 32163726 32163878 32163727 32163726 32163878 152 TTACCTGTAGTTGTCATCCTCTGAATCTGAAGCAGAAAATTCACTGCTACCATTATTTTCCTCTGTCACACCAACAGCACTAAGTTCTGCTATAATTTTCTTTACATCTGTACCAAACACCTTCTCATACAGCAACTCATAAAGAAGAGCTG ....:..:.::...................x------.x.......------....:...x..x.::..x:.x.xx.::::x.....::::.:......x:.x.....x..x::...:.................:........:....... 31M6I9M6I100M 104/140 74.3% 152/94230402 0.0% 12/140 8.6% 112995772 77218783 +3403 chr4 + 190214555 145160677 145160676 145160755 79 GTGGTGCACACCTGTAATTCCAGCTACGCAGGAGGCCGAGGCAGCAGAATCGCTTGAACCCAGAAGCCAGTGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--....:..........x::::....:...x.xxxx...x.:...............:xxx..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 69127476 NA +6738 chr4 + 190214555 145162625 145162624 145162847 223 CAAGGTGATACTTACACTGACACATAGCAGAGCTTTCTTTATACTTTATGGGATACACAATATCATAATGATTTCCATTTGAAAAACACAGTAACACCTGAAAGGGAAAAATAAAAGAAACATTTCA------GCCCCTCATACA-TATAACATTTACATAGCAATGTATGTCTC----CAATGCCTCTGAAT-TACTAGATCATTTCCAAACAGACAGTGAGTATTTTAGGAGT chr4 + 94230402 32164646 32164645 32164878 32164646 32164645 32164878 233 CAACACAATACTTACACTGGCACAGAGCAGCCCTTTCTGAATACTCTATGGGATAAACAATATCATAGTGGTTTCCATTTGAGAAGCATAGCAATACCTACAAAACAAAA--AACCCACATATTTAAGGTTTTGCCTCTCACTCAGTTCTTCATATAAACAGTTCTTTTAAACTCAAATCAATGCGTCTCATTGTACCTCAGGATCTCAAAACAGACATTAAATGATCCAAAAGT ...x:::............:....x.....xx......xx.....:.........x...........:..:...........:..:..:..:..:....:x..::x....--..xxx.x.:....x.------...:....:x..-.x:xx...x..x.:..:xx.x.xx:x...----......x...x.x.-...:xx.xx..:..x.........x.:.:.:x.::.::... 110M2D15M6I12M1I29M4I14M1I41M 154/221 69.7% 233/94230402 0.0% 14/221 6.3% 112997979 77216576 +5808 chr4 + 190214555 145164145 145164144 145164265 121 AATTCTTACCTTTTCAGGAAAATTATTTTCTGTTACTTGTGAAGGAGAAACATTTGGTTCCCGATAAATTATAAAATCTTTCCTGA------AAATAACAATTAGAAATTATTTATAATGGACTATA chr4 + 94230402 32165207 32165206 32165332 32165207 32165206 32165332 126 AATCTTAACCTTATCAGAGAAGCCATTTTCAGTCACGTGTGAAGGAGAAGCATTTGGTTCCCGATATATTATGAAATCTTTCCTGAGGGAAGAAAAGAAAACTA-AGATTACATGTAACAATCAATA ...::.x.....x....::..:::......x..:..x............:................x.....:.............------...x:.x..:..-.:....:x.:...:::x.x... 86M6I12M1D22M 92/120 76.7% 126/94230402 0.0% 7/120 5.8% 112998938 77215617 +5195 chr4 + 190214555 145165147 145165146 145165215 69 TTACCTGTACATAAGAGAAAGGGCACTTATTTCCACTTGTCCTACCCATTCCTGTATTGAAGAAAAAAA chr4 + 94230402 32167873 32167872 32167941 32167873 32167872 32167941 69 TTACTTGTACATAAGTGAAAGGGCACTTATTTCTACTTGTCCAACCCATTCCTATATTGGGGGAAAAGA ....:..........x.................:........x..........:.....::.:....:. 69M 60/69 87.0% 69/94230402 0.0% 0/69 0.0% 112997274 77217281 +5027 chr4 + 190214555 145171665 145171664 145171734 70 CATACCTGTGGATTTTCCAAACGCTTTAAATATTCTTCAAATGATCCTTCTATAAACTGCAAAAAATAAA chr4 + 94230402 32169527 32169526 32169596 32169527 32169526 32169596 70 CATACCTGTGGATTTTCCAAACATTTTAAATATTCTTCAAATGGCCCCTCTATGAACTGTATTAAAAAAA ......................::...................::..:.....:.....:.xx...x... 70M 60/70 85.7% 70/94230402 0.0% 0/70 0.0% 113002138 77212417 +3270 chr4 + 190214555 145176563 145176562 145176641 79 GTGGTGCGTGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATGGCTTGAAACCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.--......:........:..::........x.xx.x...xx:......x....:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 69143362 NA +3477 chr4 + 190214555 145195998 145195997 145196076 79 GTGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAATAAAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....--....:.:...........::........x.xxxx:..x::...........:..x.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 69162797 NA +3293 chr4 + 190214555 145208914 145208913 145208986 73 GTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGA chr4 + 94230402 76033206 76033205 76033278 76033206 76033205 76033278 73 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA .::.x....:.:.:.........::........x.xx.x...x::...........:..x:xx:..:..:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 69175708 NA +3330 chr4 + 190214555 145230298 145230297 145230363 66 GTGGTCCCAGCTACTTGGGAGGCTGAGACTGGAGAATCGCTTGAATCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..:...........::........x.:x.x...x.:......:..:.:..x.xx:..:..:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 69197086 NA +3087 chr4 + 190214555 145232821 145232820 145232890 70 CATGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--..:.x......:...........::........x.xx:x...xx:.x.......:.... 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 69199624 NA +3596 chr4 + 190214555 145245720 145245719 145245802 83 CATGGTGGCAGGCACCCGTAATCCTAGCTACTTGGGAGGCTGAGTCAGGAGAATCGCTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x:...:.:.:.........::........:.xx.x...x.:.........:.:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 69212523 NA +3203 chr4 + 190214555 145258891 145258890 145258939 49 CACCAAAACCAAAAACAAAAAAACCCAGCAAAAACACATGCACACACAC chr4 + 94230402 26446824 26446823 26446872 26446824 26446823 26446872 49 CACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACAC .....x..xx......x..........:....x.....::......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 118812067 71402488 +3140 chr4 + 190214555 145261885 145261884 145261926 42 TTCTCTCTGTCTCTCTCTCTCTTTCATACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::..x.............:...:............... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 70013838 NA +3119 chr4 + 190214555 145270298 145270297 145270370 73 TGCACCTGTGGTTCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAGTCTGGGAGGTCGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:............::::........x:xx.x.:.x.:.....::.::.:..x.:x:..:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 69237093 NA +3606 chr4 + 190214555 145270697 145270696 145270779 83 CATTGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....::..:.--......:...........::........x.xx:x...x..........::.:..x:xx:..:..... 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 69237500 NA +15095 chr4 + 190214555 145279167 145279166 145279885 719 TTTATGTAGATCTAAGAAAGCAAGAACATGAGTTAGCTGACAGCTAACCCGGCAGCATGTTTTCCTTCTTAGCTGCAGGGGAGAATAATGTACAGGAAAAGGTGATGTAATGATTGTCTCACGTTCATTATTCTCTCCCAAATGAATAACCTTCCACATCAAGGATGAGCTCACTCACTATTAGTGGAATAACATCTGGTGAGCATGGGCCCCCAGCTGAACACGCTATTGGTTTGGGGTTATATTTAACCAGTAGAGACTCA-ACTATT------------------GTTACATGTATCACATGTGCAGCCCAGTTATATTGCAAATATCTTTTTAAGGGGTAAG--------------GAAATACTCC--------------TTAAAGTATTTTAACATGCAAGCCTTTTCCTTATGAAACAAGGCACCAACCTATTCCAAAAG-AGATCTTAGGCTATTATTAGAGTGGAATATCTGAGACATGTGACAGAAGCCTTGGTCCGC--TTTGGCTGAGGCTCGGATGCTTGCCATAGCTATCTAAGTTTAAATTTCAAATCACGGATAGGAATCTCTCTCCTTCAATTTCCCTTCCCATTCTTAATTTCCAGGCAGGCCTGCCACATGGACAATGGTGGATTTTGCAGTGTAATCTCTCTAATAGATTTACTGTAAATGATGAATCATCCTAGTACTTAAATCT-----AATGAGTAATGCTGTAAGTCAATTTGGTTTTAAAAAATGCAGCCTAGCTAAGGTCATCAGTTAA chr4 + 94230402 32191188 32191187 32191915 32191188 32191187 32191915 728 TTTATCTAGACTCCATAAAATTTGAACATCATTTAACTTCAAATTGA------GAAATGTTTTTCCTGTCAGCC-CTAGTGAGAATAATGTACAGGAAAAGGTGATGTAATGATGATATCGCTTACATTATTCTCTCCCTAATGAATAA---TCTACACTAAGGATGAGCTCACTTACTATTATTGGAATCACATCT-GTAAGCCACAGTGCACAGCTCAATCTGCCAGGGTTTTGGTGCTGTAATAATTTGCTTGTAGCTTACACTTTTCATTAGAATTGGAAAGCCGTTCTACTTACTACATATGGAGTAAATTT------------TCCTCACGAGGAATAAGACAGGCTATAAAACAAAATAAACCCACTAAGCTTTTATTTACAGCATTTATACTTGGGATTCACACCCTTCCTAAGCACAGCTATATCT--TTCTGAAAGCCAATCCCAGACTATTATTAGCATAGAACATCGAAAACA--TGATGATGTCTTCTGTTCTCATTTAAGTCAGAGCTCACATGATTGACATAGTAGTCTAAGTTT-AATTTCAAACTAAGGATAGAAAATCC----------TTTCTATGTCTATTTGTAGTTTCCATGTAGACAGTCAGTGTGCTCTATTGTGAA----ACTGTGTAACTTATGTGATGTGCTTTCTGTAAATGATGAATCATTCT--TACTTAAACCTGGTAAAATGAGTAAGGCAG-GAGTCAATTTTGAATT-CAAGACATAACATAATTAGAGCCACTGACTAA .....x....:::x.x...::xx......x.x...:..xxx.::.:.------::x.......:.:.x.:...:-.x:.x..................................x:.x..:.x.x..............x.........---..:...::...............:.......x......x......-..:...xxx:.:x.x.....x..:x:..:.xx.x.....x.:.:..x.x.x:::x.x.x::..:.-...x..------------------...x:.:x..::....:..x..:xx.x..------------..:.:x::...::....--------------:.....xx..--------------...x..:....xx..x..x:.x:.x:x:....x:x..:..x:..xx:.x.:--...::....-x:...::..:..........x:.:...:...x:.:...--...:::x:x.:.:x..:.x.--..x:.:::::....:x...x...x.....:x:.........-.........::.x......:..x::.----------....:x.x:.:...:x..:......x.:..:.xxx.x:::..xx.x..x...:.----:.x......::.x.x.:..:x::..x..................:..--........:..-----.........x..x.-:.........x.xx..-x..:.:::.:.x..::..::.:..:::::... 47M6D21M1D74M3D45M1D65M1I6M18I29M12D17M14I10M14I51M2D9M1I38M2D20M2I41M1D26M10D54M4D47M2D11M5I14M1D16M1D32M 446/673 66.3% 728/94230402 0.0% 101/673 15.0% 113087979 77126576 +8853 chr4 + 190214555 145299671 145299670 145299980 310 ATCTAAATCATTTTTTGTTTCTCATTGTAAAAGCCCCTTTATGAAATCCACAAGCTTTTGCCAAGCTCTTCAAACAGTCTTTTAGCCACCACATGAGTTGAGTTCCTGCCTCTGTGCCCTGACTGATTGCTCAGGCAGCTGCGTGGGTGGCTTCAGAGTTGCACTGAAGGCTTTTATGTGGTTTTTTTGGCTGATGGGCTATTTCTACTGTCTTGTCCCTATGGGTAGCAACTCAAATTTGACTGGCTGTGATGAACACATCGTTAGTCATTTGAGAA-AAATATCTG-GTGAAAATGCCCTG--TGATGTAAA chr4 + 94230402 32198705 32198704 32199013 32198705 32198704 32199013 309 ATCTAGTTTCATTTTTTTTCCTCATCTTTGTGCACCACTTGTAAAATCCAGATG-TATTGCCAAGGTCTTCAAACGCATTTCCAGCAGCAACATGAGATGAACAAGAGCCTC-ATTCCTTGACAGACTCCTCAGGCAGCTGTGTGGGTGGCTTTGGAGTTTCTTTGTGATCTTTCATGTGGTTCGGTT-GCTGATGGGCTGTTTGT-CTGCTCTGCCCTCCTGGGTATC-ACTTGTCTTTGATTTTGAGGAATTTACACATCTTCATCCATCTGAGAATACATTTCTGCGTAAAACTCTTCTGAATTATGCAAA .....:x.:xx.....x..:.....:x.x:x:xx..x:..:.:.......x.x.-.x........x.........:xx:..::...x:.x.......x...::xxxx.....-:.x..:....x..:.x............:...........::.....x.x:..x::x....:........:xx..-...........:...x.-...:::..:..::x......x.-...::xx.....:.xxxx.x:..xx.......x.:.x:...:......-.x..x....-..:...x.x::...--.x...:... 54M1D57M1D75M1D17M1D22M1D48M1I9M1I14M2I9M 209/305 68.5% 309/94230402 0.0% 9/305 3.0% 113100966 77113589 +3633 chr4 + 190214555 145306804 145306803 145306894 91 TGCACCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGAAGATTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x....:...........::::........x.xx.x...x..........::.:..x.xx:.::..:..------..x..x...... 73M6D12M 62/85 72.9% 85/94230402 0.0% 6/85 7.1% 69273599 NA +3430 chr4 + 190214555 145313826 145313825 145313899 74 GCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCCAGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...x....:.:...........::........x.xx.x...x..:........x::..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 69280622 NA +3660 chr4 + 190214555 145334707 145334706 145334845 139 AAAATCTAAAAGGTTAAGATAGGCATGGT-----GTTGTGCACCTGTAGTCCCAGCTACTCAAGAGGCTGAGTTGGGAGGACTATTTGAGCCCATGAGTTCAAGGTTACAGTGAACAATGATCATGCTACTGT---CCTTCAGCCTG chr4 + 94230402 76033168 76033167 76033312 76033168 76033167 76033312 145 AAAGTATGTAATGTCATGAAAGG-ATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG-CCAAGCAGATGTGTGCCCTAAGCCTG ...:.x.:x..x..:.x..x...-...:.-----..x......x......:.........::.:........::xx.x.:.x:.:....:....x:..:.:x:..:.::..x:x.::...-:..x..x:x...---..:.x...... 23M1D5M5I86M1D12M3I11M 91/137 66.4% 145/94230402 0.0% 10/137 7.3% 69301539 NA +3281 chr4 + 190214555 145335029 145335028 145335107 79 GTGGCGCGTGCCTGTAATCCCAGCTACTGGAGAGGCTGAAGCAGGAGAATAGCTTGAACTCAGAAGGCGGGGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:..::.--....:.:.........x..:.......:x.xx.x...xx:.......:......x:xx...:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 69301828 NA +3071 chr4 + 190214555 145354516 145354515 145354576 61 AAAAAAAAAAAAAAAAAAGAAATAAATAAATAAAAGAGAAGGAAAAAAGAAGGATCTAAAA chr4 + 94230402 33201112 33201111 33201172 33201112 33201111 33201172 61 AAAAAAAAAAAAAAAAAAGAAATAAGTAAGCTAGAAGAAATAAGTAAAGGAGTATTTGCAA .........................:...::x.:.:::..x:.:x....:..x..:.:x.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 112153404 78061151 +3011 chr4 + 190214555 145370604 145370603 145370666 63 ATGCAAGATGAAATGAATGAAATGAAGTGAAAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGA chr4 + 94230402 63755621 63755620 63755683 63755621 63755620 63755683 63 ATGCTAGAGGAAATGAATGAAATGAATGGAATGGAAAAGTTGTGAGAAGGAAGGGGAGCAAGA ....x...x.................xx...x:.::.....xx.....::...::x.:x.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 81614983 NA +3192 chr4 + 190214555 145389842 145389841 145389965 124 CATTCAAAGTTGAGTATTACCACAAAGTAAGCACACTGAATCTATGGAATTACTTCAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAACTGTTGAAGGAATGG-GGAAAACAAATAGTACAAAT chr4 + 94230402 24148867 24148866 24148979 24148867 24148866 24148979 113 CATTCAGTGTAAA--AATACCTCAGAGTAA---CAATAAGCCT-------TATTTTAAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGACAAGT ......:x..x:.--.x....x..:.....---..x.:.::..-------..:..:..::...........:.:.:...:.::......::::..x:x..:...-:.....x...x.:x....:. 13M2D15M3D10M7D54M1I20M 77/112 68.8% 113/94230402 0.0% 13/112 11.6% 121240975 68973580 +3461 chr4 + 190214555 145417376 145417375 145417522 147 TGAAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAGAAAGGAAGG chr4 + 94230402 59372609 59372608 59372755 59372609 59372608 59372755 147 TAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG .:....:..:.:x:.x.:x:.x.:x..::..::x..:::.::......::.xx:.x.:..:.::.:.:..x..x....::.....x..x..:.:.:...x.:x..x..:......x..x:.::::x...xxx..x....::::..:. 147M 81/147 55.1% 147/94230402 0.0% 0/147 0.0% 86044767 NA +3544 chr4 + 190214555 145417377 145417376 145417495 119 GAAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGA-----GAAAAAGAAAGAAAGAAAG chr4 + 94230402 51148380 51148379 51148503 51148380 51148379 51148503 124 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .......::..xx.x...........:..:..::..x....:xxx.:::x.::..x.:..x.x:..x:.x:...:....:x...:....:..:...x..x-----...:x.x:...:...::.. 100M5I19M 75/119 63.0% 124/94230402 0.0% 5/119 4.2% 94268997 NA +3196 chr4 + 190214555 145417388 145417387 145417452 65 AGAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAA chr4 + 94230402 76841607 76841606 76841671 76841607 76841606 76841671 65 AGAGAATACATGAGGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGA .....:x:x:x...:...:x.....::.....:.:....x.......:.......:x.....::. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 68575781 NA +4340 chr4 + 190214555 145417400 145417399 145417550 151 AGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAA---AGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAA---GAAAGAAAAGAAGAAAGGAAGGAAGAAAGGAAG----GAAGGAAGGAGAAAGGG chr4 + 94230402 49044660 49044659 49044814 49044660 49044659 49044814 155 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAA------GGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG .:.:..:......x.::.:.xx.:..:::.xx.......x.:::..x:....:x.---...:.....------..:.....xx..........::..:.x....---............::..x....x.::...xx:..----.:.:..:...:..x.:. 55M3I9M6D31M3I33M4I17M 99/145 68.3% 155/94230402 0.0% 16/145 11.0% 96372740 93841815 +4304 chr4 + 190214555 145417402 145417401 145417616 215 AAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAG-AAAGAAAGAGAAAGAAAGAAAAGAAGAAAGGAAGGAAGAAAGGAAGGAAGGAAGGAGAAAGGGAGGGAGGGAAGAAGGAAGGAGGGAGGGAGGGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAG chr4 + 94230402 1317354 1317353 1317567 1317354 1317353 1317567 214 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGG--AGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAG .:..::x...:.:.x.x.x..:xx.x:..x:..:.:...xx:x:...x.:x.:.:.....xx.:..:.:...:..:..::.:.:..-.......x..xx.:..x..:...x:....x..:xx.:.--...:...:.:..::...x.x::.x....:.:..xxx...xxx..::...:....x.:xx.xx::..x::.:..:....:xx..:..:.. 86M1I38M2D89M 122/213 57.3% 214/94230402 0.0% 3/213 1.4% 144100048 46114507 +3005 chr4 + 190214555 145417428 145417427 145417503 76 AGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:..:..x...........:.x:.:.:..x:x....:..xx.xx.x...:.:..x.:..:.:...:.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 107338650 82875905 +3089 chr4 + 190214555 145417434 145417433 145417518 85 AAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAGAAAGG chr4 + 94230402 53763985 53763984 53764069 53763985 53763984 53764069 85 AGAGATTAATAGTAATAAAAAGGGAATCTAAATGAGGGGAAAAGAAAAGGAAAAAAAAAAAGGACAAAATGGAAAATATTAGAGG .:...xx:.:..x..x.....:.x..xxx...x..:..:..:......:....:...:....::x..:.x:.....x.xx.:... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 91653449 NA +3213 chr4 + 190214555 145417453 145417452 145417515 63 AAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAGAA chr4 + 94230402 27800027 27800026 27800089 27800027 27800026 27800089 63 AGAGTAAGATTAGTGAAGGAACAAGGGAAATGAAGAGAGGAAAAGAAAAAAAAAAAACAAGAA .:.......xx.:x.......x:..::...x:....:..:..:.....:...:....x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 117617426 72597129 +3019 chr4 + 190214555 145417495 145417494 145417580 86 GAGAAAGAAAGAAAAGAAGAAAGGAAGGAAGAAAGGAAGGAAGGAAGGAGAAAGGGAGGGAGGGAAGAAGGAAGGAGGGAGGGAGG chr4 + 94230402 70338957 70338956 70339042 70338957 70338956 70339042 86 GAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAGCAACCGGGAGG ..::::....:...::......x..::.:......:::..::.x::..:.::x..x:...x...:...:x...:.x::xx...... 86M 51/86 59.3% 86/94230402 0.0% 0/86 0.0% 75078538 NA +3562 chr4 + 190214555 145417532 145417531 145417644 113 AGGAAGGAAGGAGAAAGGGAGGGAGGGAAGAAGGAAGGAGGGAGGGAGGGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAAAGTAAGTGGGGGAAGGAGGG chr4 + 94230402 890668 890667 890775 890668 890667 890775 108 AGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAG-----GAGAGTGGATGGGGGGAGCCGGG ..::...::.x...::::.........x.........:..x.::x.::.:.....:..x:x..::.....xx::.:.x:.x::..-----..:...:::......:..xx... 85M5D23M 67/108 62.0% 108/94230402 0.0% 5/108 4.6% 144526864 45687691 +3265 chr4 + 190214555 145417538 145417537 145417588 51 GAAGGAGAAAGGGAGGGAGGGAAGAAGGAAGGAGGGAGGGAGGGAAAGAAA chr4 + 94230402 11260871 11260870 11260921 11260871 11260870 11260921 51 GAAGGAGAAGGCAAAGCAGTGGTGAAGGAAGGAGGGAGGGAGGGAAAGGGA .........:.x:.:.x..x.:x.........................::. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 134156667 56057888 +3383 chr4 + 190214555 145417632 145417631 145417680 49 GGGGGAAGGAGGGAGAAAAGAAAGGGAAAGAAAGAAGAAAGAAAAAAAG chr4 + 94230402 73633586 73633585 73633634 73633586 73633585 73633634 49 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAGG .....::......:......:........:...:..:...:....:.:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 71784046 NA +3250 chr4 + 190214555 145426497 145426496 145426575 79 GTGGCACATGCCTGTAATCCCAGCCACTTGGGAGGCTGAGGCATGAGAATTATTTGAATCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:.....:.....::........x.x..x...x:.:.....:.::.:..x.xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 69393296 NA +3185 chr4 + 190214555 145471053 145471052 145471133 81 CACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 22600181 22600180 22600261 22600181 22600180 22600261 81 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCAT ....x.x.:x..x:x.x.......:.:x....::..x......::...:.x.x....:.....x.:.:.:.:.....::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 122870872 67343683 +3176 chr4 + 190214555 145477900 145477899 145477994 95 TATATATATATATACGTATATATACATATGTACATATGTATATACATATATATACACACACATATATATATATATATATATATTTTTTTTTTTTT chr4 + 94230402 5849263 5849262 5849357 5849263 5849262 5849357 95 TGTATGCACATGTAAGAAAACATACAAAAGTAGGGGTGTCTGTACCTACATAGACACACACATGCACATACCTTCACATCTAACATTTTTGTTCT .:...::.:..:..x.x.x.:.....x.x...x:x:...x.:...x..:...x..........::.:...:x.x:.:..x..x:x.....x..:. 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% 139628637 50585918 +3150 chr4 + 190214555 145477961 145477960 145478020 60 ATATATATATATATATATATATTTTTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTTG chr4 + 94230402 24792626 24792625 24792685 24792626 24792625 24792685 60 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTG ...................x:........x.........::.:.:x.x:..xx::.:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 120685335 69529220 +9422 chr4 + 190214555 145481592 145481591 145482437 846 GGAAGAAACGGGGCGT--GGGGCTG----CCGGTAGAAG---GGGGTGGCTCCGGCCGCTCCCCCGCGCCGTCCTCC------GGCCCCGGCCGCGCTGCGCTCACGCCGGCCGGGCCGGGAATTTGGAGAGGATCCCTGGTCGCGCGGCAGCGGCGGCG-GCGCGCGGGTGAGCGGGTGAGCGTGTGAGCGGGCGGGCGGGCAGGCGAGTGCGCCGG---GTATTGGCAGCTGAGGAGTGGAGGCTGGGCAGCTCCGACTCCCTGACGCCAGCGCGACCAGATCAATCCAGGCTCCAGGAGAAAGCAGGCGGGCGGGCGGAGAAAGGAGAGGCCGAGCGGCTCAACCCGGGCCGAGGCTCGGGG----------AGCGGAGAGTGGCGCAGCGCCCGGCCGTCCGGACC-----CGGGCCGCGAGACCCCGCTCGCCCGGCCACTCGTGCTCC------------CACACGGACGGGCGC--GCCGCCAACCCGGTAAAACGAAACAGACCCGAACCGAACTTTCCCTTCATGCC-----GCGTCCCAGCCCTCCCCTCGGCGCCCCGGGCTTTCCAGCGCCGCCGCCGCCGTCTCTGCACGCGTGGG-GCCGCCGCGGTCGTGCTGGGCTGGGGGCGCGGGCAGCGGCGGGAAGGGGGCTCTTTCTGCGCGGGGCGGGCCGCGACCC-CCCCCCCCCATGATGGCGCCTCCCGTCTGCTCGGAGGAGCGAACCTGCTACCACGTCTTCTCGCGCCCAGCCCGCCGG----------GCTCCCCTGGTGTCTTTGTTGGGTCTTCTGCTGTGGGAAGCCCAGTTCCCGGGCCCCCGAGCCTCGGCTCCCGGGCCTGACCGCGCTGGGATCTCCCCGGCCGCGCTCCCCTTCCGCGCGCTCCTCACATCTC chr4 + 94230402 32238343 32238342 32239129 32238343 32238342 32239129 787 GGAGGGAACGCGGCGTTGGAGGCCGAGCCCCGGGCGGGGATAGAAGAAGCCCTGAGCGC------GCGCAGCGCTCCTAGCGGGGCCCGAGCCCTGCT----------CGGCGGGGGCGGTAATTTGGAGAGGATCCCTTGTCGGGCCGgtgcgtgcgcgcgcgcgcgcgcgtgtgtctatgtgtgtgtgtgtgtgtgtctatgtgtgtgtgtgtCCGTGCGAGCTGGCAGC-GGTAAGTGGAGGCTGGGCGACTCCGACTGCCTGACGCCAGCGCGACCAGATCAATCCCGGC-----------------------GCGGAGGCAGG-GCGGGCGCGGGGCTCGCCCCCTCTCAGCGCCCGGCGGCCGTACCACAGCCGGTAACAGCTTCGCGGCCCCTCGTCTCTCCCCGTGGCGGGCGGCTGCGCccttctcctccttctcctcctcctcctcctccCCGCTGCACCGGGCCAGGCGAGGGTCCCCGGCGCGTCCGGGAGAAGCGGCTCCGTGCC---CTCTCCCTGCCGGCATGATGGCGTCCC-GCCTCGCCGCCGGCCCCC---GCTTCCCGG-------------------GTAGGTGCGGGTGCCGCCGCGGGCTCGGAGGGAGGGGGGC--------CCGCGGGAAGCCGCTCCTccgcccgc------ggccgccgcccggccccgcTCTCGCTGCCGGCCCCATTGTGCCCCGGCCGGGGA---------------------CGCGCAGCGCTTCGGGACGGGGCGAGCGCCC-----GCCTTTGT------TTTTACGGGGAGAAGCTTTTCGCCTCGGC----------CGGCCCGCAGTTCTGCCTGCGTCGTGACTTGATCTTCCTTTCTTTCTCTCCGCG-GCCCCCCTCTCCTC ...:.:....x.....--.:...:.----....xx.::.---.::.x:..:.:.:x...------....x.:x....------.....x:...x:...----------....x...x...x..................x....x..x.xx...xxx...-.......x.:.x.:.xx.:x.:.....x.:.x.:.x.:xx:::x.:.x...:.:.x.---.x::.......-.:x:..............::........x............................x...-----------------------......:x...-.x..x..x.x.....:x...xxx:.::x..:...x.----------...x.:x.:::..x:x...x..xx:....:xxx..-----.....x..x:x:...:x...x:..xx.:x...x.x....------------...xx..x.:....x--.:.x..::.x..x:x:::x...:.:.x:...x:..---..:.....x.xx..x-----.......-...::x..x:....x...---....:..:.-------------------.:.x.:.:...-..........x.x:.xx...xx......--------.x........xx.x::..::x:x...------......x:...-x....x.:.x:.x..x..x.:..xx.x...:.x.:xx:.x..---------------------...x....x.x:...----------..x...-----.:......------..:.:.x.x.:.....::xx:x..:x...----------....:.x.:.x:...x.:...::.x..::.xx:.xx..x:x..::.::......-..:..:.x.x:... 16M2I7M4I10M3I17M6D12M6I15M10D52M1I57M3I11M1D61M23D11M1D36M10I35M5I39M12I15M2I35M3D15M5I7M1D18M3D9M19D11M1I28M8D26M6D11M1I42M21D15M10I6M5D8M6D29M10D54M1D14M 475/722 65.8% 787/94230402 0.0% 189/722 26.2% 113243249 76971306 +25443 chr4 + 190214555 145483713 145483712 145484541 829 AGGGTCGTGAGAGATGATTTTTCTGGAGGTGGGTGATGCCAGAGCCTCTA-----------GAGGATCC-----AGGCAGGATCGAGTTTCTTCTGAGGGTAGGGATTTGTCCTTGATTTAGTTTTGACCCCTACAACCA-TAGGTATGTAACCAAATACATTTTACCTC-TTGCAGTATCCT-------TTGGTTTC----GTATCCTTGAAGAGCTGATGA-CCTTTGTGTTTTAGAGAAATGACAATTTTTAGGCAATTAAAGACATTGGCCTCTTACACTTCTTGGAATTTTATGTTATTTTT---ACTAAGTTCATTAAGGCATTAAGAGGAAGTTGTCACATTTT-------CTCAACTAC----------GTTTATTACATTTATTAGTTAAAAA------CTAAATTTCACTT--TGTAATTTTGATTTCTAGCAATTC---TGGGTTAAATATTAAATCTAATAACCTAGTAGA-----------TTGGAAAAAGAAGTAGCTTGGG--TATAGTAATTAGACTAGCATGTTTAAGCTGCAGTAGCCTACATAATCA---------------AGGCCAAGTGTGTGTGTATAAAAGAT---CTCATTTGTGTAGTCTTA-CAAGGCTAATGGAGGCATCACTGAGGCTTTATAAATAATGTAAGTTGGGTATAATGTAGAGTCTCCAGAGACGGCAGAGAAAGCATCATTACCAGCCTTTTCAACCTGCTTGAGATCTTAAATTGATTTACAGCACTGAACTGGTGCAAAATGATACATCAGGATGACATGGGGTCAGCCTGTAAAAGTCTATGATGTCAGCCTATTAGTTCAGTCATCATAATTAAACCATATTACAGGGGTAGCTAAGCAGGAGTCTGG---------CGTTATACTTCAGATATGGGTGGTACATGGGT chr4 + 94230402 32240405 32240404 32241306 32240405 32240404 32241306 902 AGGAGCTTGAGAGA-AATTTCCCTGGAGCTGGGTGAGCCCGAGTTCTCCACAGCTACCAGAGAGGATCTGTTCAAGGCATGATCAGGTTACC-CTAAGGGCAGGGATTTGTCCTTGCTGCAATTTTGACCCC-ACAACCACTGGGTATGTAAACAAATACATTTTTTTTCCTTGCTCTGTCCTGTCGGACTTGCCTTCTTGTGTGCCCTTAAAGATGTGATGATCCAATGCATTTGAGAAAAGTGAC--TGAATAAGCAGATGAAGGC--------------CTTTCTGTTTCTATATATTAACTGTCAAGTCAGATGCATGAAAACT----GATGAGCTTTTGCTGTTCTTCTGTAGCTTGAACACAAAGTAAGGAGCTGAATGTATGGAAAAGTAATATAATGGCTCTGAAAAGTACTTACCGTGTTCCAGAATACTGGGAAATTACTCAGGTTAAATTCCGAGTTTAGTTGCTTAGTATAAAAATTCAAATTCTGCAAATGAAGGGGTTGTGGCTTTTTTTAATTGAA---GCATTAATGCACTGTA-TATCACATATGGCCAGTGGTGTGCTTTCTGAGGTCCAGGCTGGGTGTGTAAAGGAGAGGCTTATTTGAGTAGTCTTAGCAAGCCTAATGGAGGCATCATCTCAGCTTTATAAATAATGTAAGTTGTGCATAATGTGGAGTCCCTGGAGACTGCAGAGAAAGCATCATTACCAGCCTCTTCAACCTGCTGGAGATCTTAAATTGATTTACAGCACTGAACTGGTGCAAAATGATACATCAGGATGACACGGGGTCAACCTGTAAAAGTCTATGATGTGAGGCCGTTAGTTCAGTCATCATAATTAAACTGTATTATGAGGGCAGCAAAGCAAGCGTGTGTGACACGTCCCATTGTGCTTC--ACATGGGTGGCTTAAGAGT ...:x.x.......-:....::......x.......xx..:::x:...:.-----------.......:-----.....x....::...x.:-..:....:...............x.x:.:..........-.......-.:.........x............x::..-....xx.:....-------...x:...----..::....:....xx......-..xx..::...x...:..:....--.xxx..:...:x.:...:.--------------...::..xxx:.x...:...x:.x.---:::.::.x...x..::.x----..x..:x..x.xx::..:.-------..::.x:..----------.:.x.x.::..xx.xx...x.x.x.------..:..xxx:....--:..:x.::x..x.x..:.x..x.:---::........x:::.:.:..:.x:.:.....x.-----------.:x.x...x....x:.:.xx..--.x.xx.....::.---....xxx.:x:...:.-..x.x:.:..:::..---------------...:.x..xx..x....:....:..x---..:.....x.........-....x...............::xx:......................x.:.......:.....:.::.....x.........................:...........x..........................................................:.......:....................x..x.::........................::.....:::...:...x.....:.x..x..x---------.:..:.:....--.:........:x:.x.:.. 14M1D35M11I8M5I18M1D39M1D7M1I29M1I12M7I8M4I21M1I23M2D19M14D25M3I18M4D19M7I9M10I25M6I13M2I24M3I33M11I22M2I13M3D16M1D15M15I26M3I18M1I261M9I11M2D19M 588/800 73.5% 902/94230402 0.0% 131/800 16.4% 113243308 76971247 +3511 chr4 + 190214555 145491271 145491270 145491373 103 ATGAAATGCCAACTGCTGACGGGAAGATTC-------TGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAAAAGGATCACTTAAACCCAGCAGTTCAAGGCTGCAG chr4 + 94230402 76033173 76033172 76033277 76033173 76033172 76033277 105 ATGTAATGTCA-----TGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:..-----...x:...x...x.-------...:.x....:.:.........:x::........x.xx:x.:.x.....:.......x..:.:x:.....:.. 11M5D14M7I73M 70/98 71.4% 105/94230402 0.0% 12/98 12.2% 69458098 NA +22607 chr4 + 190214555 145501184 145501183 145501580 397 AAAATTCCTGACAATGACAGATCAACAAGTTTTATTTCTCTCACCTGTGGAGGAAGTGGCCTCCACCCAGTTTTACTGAATTAGGAGGGAAGTGATTTTTTCAAGTGATAAAAAGAAATAAAATTCCATGCTCTTCCCAGAGGAGGAGTTCAACAATTGGGAAAGTGGCGTGAGACCATATGTTGGTTTGTAAAAGGATATAACTTGTAAAGATGTTTCCTTTGATGCCTGTGATGAATATGGATGTGTTTCCCTTCTAGAGGGTCCTGATTAAATTATGCAATTAAGAGCTGAGCTGAAGGATCTAAATATAGGAAGAGAGTTCAGGCCGTCCTG-CTTTGTGTCTGTCAGTTCACCCCTACAGATGTGCATGT--TTGTTGTCATAAACAGCACCTGT chr4 + 94230402 32251427 32251426 32251823 32251427 32251426 32251823 397 AAAACCCCTGACAGGGACATGTCAGTATATTTTCCCGCTCTCACCTGTGAAGGAAGTTCCTCCCGCCCTACCCTGATGAAT-GGGAGGGAAATGCTTTTTACAGCTGATAAAAAGAAATAAAATTCCATGCCCTTCCCAAAGGAGGAATTCAACAATTGGACGAGTGGCGTGGGACCATGTGTTGGTTTGTAAAAGGATATCGTTTGTAAAGATGTTTCCTTTGAAGCCTGTGATGAATATGGATGTGTTTCCGTTGGAGAAGGTTTTGATTAAATTCAGCAATT-AGAGCTGACCAGACAGATCTAAATATAGGAAGAGGTTTCA-GTTATCCTGTCTTTGTGTGTAGTAACGCACCCACGCAGATGTGTGTTTTGTTATTGTTGTAAACAACACCTGT ....::.......:x....x:...::.x:....x::x............:.......xx.::..:...x::::.:x.....-:........:..x.....x..:x..........................:.......:.......:............:x:.........:......:.....................x::.....................x...........................x..xx...:...::..........xx......-........x.x..x:...................:x....-.:::.....-........x.:x:.::x.....x::........::.x.--..:....::......:....... 81M1D203M1D40M1D9M1I38M2I23M 315/394 79.9% 397/94230402 0.0% 6/394 1.5% 113249757 76964798 +29379 chr4 + 190214555 145514602 145514601 145515019 418 AGTGCTGTCATTATGAATGTGACAAGTTTATTTTCCTTTACAAGTCCAGCTGTGAAGAGACTTCTTGGGTGGAAACAGGGCGATGAAGAAGAAAAATGGGCAGAGAAAGCTGTTGATGCTTTGGTGAAAAAACTGAAGAAAAAGAAAGGTGCCATGGAGGAACTGGAAAAGGCCTTGAGCTGCCCAGGGCAACCGAGTAACTGTGTCACCATTCCCCGCTCTCTGGATGGCAGGCTGCAAGTCTCCCACCGGAAGGGACTGCCTCATGTCATTTACTGCCGTGTGTGGCGCTGGCCCGATCTTCAGAGCCACCATGAACTAAAACCACTGGAATGCTGTGAGTTTCCTTTTGGTTCCAAGCAGAAGGAGGTCTGCATCAATCCCTACCACTATAAGAGAGTAGAAAGCCCTGGTAAGT chr4 + 94230402 32259329 32259328 32259746 32259329 32259328 32259746 418 AGTGGGATCACCATGAACGTGACAAGTTTATTTTCCTTCACCAGCCCAGCAGTGAAGAGGCTGTTGGGGTGGAAGCAGGGAGATGAAGAAGAAAAATGGGCAGAGAAGGCTGTTGATGCACTAGTGAAAAAACTAAAGAAGAAAAAAGGTGCTATGGAGGAGCTGGAGAAAGCGTTAAGCTGTCCTGGTCAGCCCAGCAACTGTGTCACAATTCCTCGGTCCTTGGATGGCCGGCTTCAGGTTTCACACCGGAAAGGGCTGCCGCATGTAATTTACTGCAGAGTGTGGCGCTGGCCAGACCTGCAAAGCCATCATGAACTGAAACCACTGGAATGCTGCGAGTTTCCTTTTGGTTCAAAACAGAAGGAGGTCTGCATCAATCCTTACCACTACAAGCGGGTAGAAAGTCCTGGTAGGT ....xx:...::.....:....................:..x..:.....x........:..x:.x........:.....x..........................:...........x:.:...........:.....:..:........:........:.....:..:..x..:.....:..x..x..:..x..:...........x.....:..x..::........x....x..:..:..x........:..:.....x.....x.........x.x..............x..:..x..:.....:........:.................:.................x..:.......................:........:...x.:........:.......:.. 418M 352/418 84.2% 418/94230402 0.0% 0/418 0.0% 113255273 76959282 +3199 chr4 + 190214555 145519007 145519006 145519113 107 TTTGCTTATTTCTTTCTTTTTCTTTTTTTCTCTTT-----TTTTTACTGCCTATTCTCTGAACCATTTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79895988 79895987 79896086 79895988 79895987 79896086 99 TTAGTTCAACCTTTGCTTTTGTTCTTCTGCTCTTTAACCTTTCCTAGTGTTTGTT-------------GTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTGGCTTTT ..x.:.:.x:::..x.....x:.:..:.x......-----..::..x..::.:..-------------x....x...x........:..................xx:.... 35M5I15M13D44M 68/94 72.3% 99/94230402 0.0% 18/94 19.1% 65623019 NA +3718 chr4 + 190214555 145519011 145519010 145519120 110 CTTATTTCTTTCTTTTTCTTTTTTTC-----------------------TCTTTTTTTTACTGCCTATTCTCTGAACCATTTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTAG chr4 + 94230402 27277936 27277935 27278067 27277936 27277935 27278067 132 CTTTTTTATTTTTTTCTATTTTTTTCAGTCAGTTAGGCTGTCTGTGAGTTTTCTTTTTCCATACCTGTTGCCAGCAT-ATGCTTCTTTCTGTTCTGTTGGCTTTTTTTTTTTTTTTTCTTCCCACTGAGGTGG ...x...x...:...:.x........-----------------------.:.:.....:xx.:...:..x:.x.x.:-..x:..:.x.:....:x......................:..:::x:......:. 26M23I28M1D55M 78/109 71.6% 132/94230402 0.0% 24/109 22.0% 118241075 71973480 +3308 chr4 + 190214555 145519012 145519011 145519110 99 TTATTTCTTTCTTTTTCTTTTTTTCTCTTTTTTTTA---CTGCCTATTCTCTGAACCATTTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79895988 79895987 79896079 79895988 79895987 79896079 92 TTAGTTCAACCTTTGCTTTTGTTCTTCTGCTCTTTAACCTTTCCTAGTGTTTG----------TTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTT ...x...xx:....x::...x..::...x:.:....---:.x....x.x.:..----------.......x........:.xx................... 36M3I14M10D39M 67/89 75.3% 92/94230402 0.0% 13/89 14.6% 65623024 NA +3002 chr4 + 190214555 145519068 145519067 145519112 45 TTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59215504 59215503 59215548 59215504 59215503 59215548 45 TTTTTTGTTTGTTTTGGGGGCTTTTTTGTGCTTTTTTTTTTTTTT ..............x.xx.........x.x:.............. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 86303564 NA +20490 chr4 + 190214555 145539770 145539769 145540064 295 TTTGTCCTTCTCTTTTTTCCCTTCCTTTTTCTAGTACTTCCTCCTGTGCTGGTTCCAAGACACAGCGAATATAATCCTCAGCACAGCCTCTTAGCTCAGTTCCGTAACTTAGGACAAAATGAGCCTCACATGCCACTCAACGCCACTTTTCCAGATTCTTTCCAGCAACCCAACAGCCACCCGTTTCCTCACTCTCCCAATAGCAGTTACCCAAACTCTCCTGGGAGCAGCAGCAGCACCTACCCTCACTCTCCCACCAGCTCAGACCCAGGAAGCCCTTTCCAGATGCCAGGTA chr4 + 94230402 32272319 32272318 32272604 32272319 32272318 32272604 286 TTTGTCCTGCTTTCT---------CCCATTGCAGTTCTACCTCCGGTGCTGGTTCCAAGGCACAGCGAATACAACCCTCAGCACAGCCTCTTGGCTCAGTTCCGCAACTTGGGACAAAATGAGCCCCACATGCCACACAACGCTACTTTCCCGGACTCTTTTCAGCAACCCAACAGTCACCCGTTCCCCCATTCGCCAAACAGCAGCTATCCAAACTCGCCTGGAAGCAGCAGTAGCACCTACCCACATTCTCCAGCCAGCTCAGACCCAGGAAGCCCTTTTCAGATGCCAGGTA ........x..:.:.---------.::x..x:...x..x.....x..............:...........:..:.................:...........:.....:..............:..........x......:.....:..:..:.....:..............:........:..:..:..x..x..:.....:..:........x.....:........:...........x..:.....x:.........................:............. 15M9D271M 245/286 85.7% 286/94230402 0.0% 9/286 3.1% 113267451 76947104 +7499 chr4 + 190214555 145542528 145542527 145542759 232 TGAGCATGTATGTTTACTAAGGGTTAAGAAATAACTTCTTTAAAAACTTTGTA----GCTGATACGCCCCCACCTGCTTACCTGCCTCCTGAAGACCCCATGACCCAGGATGGCTCTCAGCCGATGGACACAAACATGATGGCGCCTCCCCTGCCCTCAGAAATCAACAGAGGAGGTAAAACTAATTGCTGCCTGTTCCCTTTTTTA------GAGTCTAAAGTTTGTCCAGA-------TGTTACTTT chr4 + 94230402 32275087 32275086 32275334 32275087 32275086 32275334 248 TGGGTATGTATATACTTTAAAGAG-AAGAAAGGACTCATCTATCTCTTCTATATTTAGCTGATACTCCTCCTCCTGCTTACCTGCCTCCGGAAGATCAGATGACACACGATACCTCCCAGCCAATGGATACCAACATGATGGCACCCGGAATCCACCCTGACATACACAGAGGAGGTAAAAATGTTTCCTTCTCATCTCCTGCTTTGCTTCTTAAGAGTAAAGTACTTTCAGAACTGCTTAGTTACTTT ..:.:......:.x:x:...:.:x-......x:...:x.:..xxxx:.:.:..----........x..:..x.................x.....:.xx.....x..x...:x...:.....:.....:..x...........:..:xxxx.x.x.:.x..x..xx...............x.:x..x..x.:::.::...x:...:------:..xx......x:x.:....-------x........ 24M1D28M4I150M6I20M7I9M 160/231 69.3% 248/94230402 0.0% 18/231 7.8% 113267441 76947114 +3315 chr4 + 190214555 145544452 145544451 145544523 72 GCCCCTGTTGTCCGAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x...x..:.x.........::........x.xx.x...x.............:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 69511246 NA +3203 chr4 + 190214555 145545523 145545522 145545595 73 TGGGTTTTTTCATGAGTATTTTCCTTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTTTGTTATTGTTGTTTT chr4 + 94230402 30152769 30152768 30152830 30152769 30152768 30152830 62 TGGGTTTTTTGGTGGCT-----------TTCTTTTTCGTGTGTGTGTGTGGGGGGGGTTGTTGTTGTTGTTTT ..........x:..:x.-----------..:.....:.............x.x.x.x.....:.......... 17M11D45M 51/62 82.3% 62/94230402 0.0% 11/62 17.7% 115392754 74821801 +3428 chr4 + 190214555 145545544 145545543 145545608 65 TCCTTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTTTGTTATTGTTGTTTTGT-----TTTTTACCAAA chr4 + 94230402 48767263 48767262 48767332 48767263 48767262 48767332 70 TTTTTGTATTTTTTTTTTTCGCGTGTGTGTGTGTGTTTGGTTTTGTTGTTGTTTGCTTGTTTCTACCAAA .::....x........x.x:.:.................x.x........x.x.-----...:....... 54M5I11M 53/65 81.5% 70/94230402 0.0% 5/65 7.7% 96778281 93436274 +23726 chr4 + 190214555 145545855 145545854 145546211 357 TCTTTAAAACCTTTTAGTTGCAAATGTTTAGAACCATGTTCTGTTTGGAGATTTGTTAGTCTTAAGAGATTTGACTTAACAAGCTGCATCCTGTCAGTAAAGTTGGGTAATTTCCATTGTTGGCCCATTCTGGGAATGGAGAGACAAAACACACCTGCTCTGCATGACTTAAAGCAAATATAAGGAAGTTAGCATGAAATCTGGATGAGAAAGATATGATTCATTCTGTAAGAATGGCCAGCTGGCAAGATTTCTTCCTGA-GTTTGAGAACTGGAGCAACACTGTAGCTGTGATAGTTATTGGCAACTTAATATGAG------GTAAAGTAACTTCTTATCAATAATTAGAAACTGATTTTCA chr4 + 94230402 32277125 32277124 32277488 32277125 32277124 32277488 364 TTTCTGCAACATTTTTGTTGCAAGCTTTTAGTAGCATGTTTTTCATGGTGATTTGTTAGTCTTAAGAGCTTTGACTTAACAAGCTGCATCCTGTCAATGAAGTTGGGTAATTTCCATTGTTGGCCCATGCTGGGAATAGAGAGACTAAGCGCACCTGCTCTGCATGACTTAAAGCAAATGTAAGGAAGTTAGTATGAAATCTGTGTGAGAGAGATATGATTCATTCTGGAAGAATGGCCAGCTGGCAAGATTTCTTCCTGACTTTTGAGAACTGGGGTAAAGCTGCAGCTTTGATAATTGCTGGCATCTTCATGTGAGTTTAAAGTGCAGTAATCTCTTACTAATAACTAATGAATGGTTTTTA .:.:.:x...x....x.......::x.....x.x......:.x:x...x...................x...........................:.:.............................x........:.......x..:.:............................:............:..........x:.....:.................x................................-x............:.:..x:...:....x.....:..::.....x...x..:....------..:x.....::.....::.....:..:x:.x..:....:. 261M1I56M6I40M 301/357 84.3% 364/94230402 0.0% 7/357 2.0% 113268730 76945825 +16658 chr4 + 190214555 145546581 145546580 145546948 368 TAATAGCAATTGCTTTTCCAGTGTCTTCATTCCATGATCCTGAGCCAATTCAACAACACGGTTTCAGTTTTTGAGAGCCTGAGGCA-----CTAACCTTGGTTGATATAACATTTTCTT-----TCCTCTAGATGTTCAGGCGGTTGCTTATGAGGAACCAAAACACTGGTGCTCTATTGTCTACTATGAGCTCAACAATCGTGTGGGTGAAGCGTTCCATGCCTCCTCCACAAGTGTGTTGGTGGATGGTTTCACTGATCCTTCCAACAATAAGAACCGTTTCTGCCTTGGGCTGCTCTCCAATGTTAACCGGAATTCCACTATTGAAAACACCAGGCGGCATATTGGAAAAGGTGAGTTTTTG--CTTTAACCTCTTT chr4 + 94230402 32278991 32278990 32279367 32278991 32278990 32279367 377 TAACTGCAGTTGATTATCCAG-GTCATCTTTTACTGATCTTCTGCCAA--AATCTGCAGGTTTACGAATCTTTTGATCTTAGGTCTGTATTCCAGCACTGTCAGACTGTAAATTTGCTTGGTTGCTTTGTAGATGTTCAGGCTGTTGCTTATGAAGAGCCGAAGCATTGGTGCTCCATTGTTTATTACGAGCTGAATAATCGTGTTGGGGAGGCCTTCCATGCCTCTTCCACCAGCATCCTGGTGGATGGCTTCACTGATCCTTCAAACAACAAAAACAGATTTTGCCTGGGGCTGCTCTCCAATGTTAACCGGAATTCCACCATTGAGAATACAAGGAGGCACATTGGAAAAGGTGAATTTTCAATCTTTGCATTCTTT ...:x...:...x..x.....-...x..x..:xx.....:.xx.....--x.x.x:..x.x..x.::x.:..xx..x.:.::.x.x-----.:.:.x:..x:x..:xxx.x....x...-----:::.x.............x...........:..:..:..:..:........:.....:..:..:.....x..:........x..x..:..x...........:.....x..::.x:..........:..............x.....:..:...x.x..:.....x................................:.....:..:..x...x....:..............:....::--....:xx:..... 21M1D26M2D36M5I28M5I241M2I13M 273/365 74.8% 377/94230402 0.0% 15/365 4.1% 113267590 76946965 +18083 chr4 + 190214555 145553773 145553772 145554048 276 TCTTCCTATAGGAGTTCATCTTTATTATGTTGGAGGGGAGGTGTATGCCGAATGCCTTAGTGACAGTAGCATCTTTGTGCAAAGTCGGAACTGCAACTACCATCATGGATTTCATCCTACTACTGTTTGCAAGATCCCTAGTGGGTGTAGTCTGAAAATTTTTAACAACCAAGAATTTGCTCAGTTATTGGCACAGTCTGTGAACCATGGATTTGAGACAGTCTATGAGCTTACAAAAATGTGTACTATACGTATGAGCTTTGTGAAGGTAAGTGA chr4 + 94230402 32281359 32281358 32281634 32281359 32281358 32281634 276 TCTTTTTCCAGGTGTTCATCTCTATTATGTTGGTGGAGAAGTGTACGCTGAATGCCTCAGCGACAGCAGTATTTTTGTGCAAAGTCGAAACTGCAACTACCACCATGGTTTCCATCCAACCACAGTGTGCAAAATTCCCAGTGGCTGCAGTTTGAAGATTTTCAATAATCAGGAGTTCGCTCAGCTCTTAGCACAGTCGGTGAACCATGGCTTTGAGACGGTGTATGAGCTTACCAAGATGTGCACTCTCCGCATGAGTTTTGTAAAGGTATGTGA ....::.x:...x........:...........x..:..:.....:..:........:..:.....:..:..:..............:..............:.....x..:.....x..:..x..x.....:..:..:.....x..:...:....:.....:..:..:..:..:..:......:.x..:........x...........x........:..x...........x..:.....:...x.x..:.....:.....:......x.... 276M 223/276 80.8% 276/94230402 0.0% 0/276 0.0% 113272414 76942141 +44845 chr4 + 190214555 145557778 145557777 145559209 1432 ATGTTTTTCCTAGGGCTGGGGAGCAGAATACCACCGCCAGGATGTTACTAGCACCCCCTGCTGGATTGAGATACATCTGCACGGCCCCCTCCAGTGGCTGGATAAAGTTCTTACTCAAATGGGTTCACCTCATAATCCTATTTCATCTGTATCTTAAATGGCCCCAGGCATCTGCCTCTGGAAAACTATTGAGCCTTGCATGTACTTGAAGGATGGATGAGTCAGACACGATTG---------------------AGAACTGACAA---------AGGAGCCTTGATAATACTTGACCTCTGTGACCAACTGTTGGATTCAG-------------AAATTTAAACAAAAA---AAAAAAAAAACACACACACCTTGGTAACATACTGTTGATATCAAGAACCTGTTTAGTTTACATTGTAACATTCTATTGTAAAATCAACTAAAATTCAGACTTTTAGCAGGACTTTGTGTACAGTTAAAGGAGAGATGGCCAAGCCAGGGACAAATTGTCTATTAGAAAACGGTCCTAAGAGATTCTTTGGTGTTTGGCACTTTAAGGTCATCGTTGGGC-AGAAGTTTAGCATTAATAG---TTGTTCTGAAACG-TGTTTTATCAGGTTTAGAGCCCATGTTG----AGTCTTCTTTTCATGGGTTTT---CATAATATTTTAAAACTATTTGTTTAG--CGATGGTT----TTGTTCGTTTAAG-------------------------------------TAAAGGTTAATCTTGAT---GATATA-CATAATAATCTTTCTAAAATTGTATGCTGACCATACTTGCTGTCAGAATAATGCTAGGCATATGCTTTTTGCTAAATATGTATGTACAGAGTATTTGGAAG-TTAAGAATTGATTAGAC---------TAGTGAATTTAGGAGTATTTGAGGTGGGTGGGGGGAAGAGGGA------------AATGACAACTGCAAATGTAGACTATACTGTAAAAATTCAGTTTGTTGCTTTAAAGAAACAAACTGATACCTGAATTTTGCTGTG--TTTCCATTTTTTAGAGATTT-----------TTATCATTTTTTTCTCTCTCGGCATTCTTTTTTCTCATACTCTTCAAAAAGCAGTTCTGCAGCTGGTTAATTCATGTAACTGTGA----GAGCAAATGAATAATTCCTGCTATTCTGAAATTGC----CTACATGTTTCAATAC-CAGTTATATGGAGTGCT-TGAATTTAATAAGCAGTTTT-TACGGAGTTTACAGTACAGAAATAGGC-TTTAATTTT-CAAGTGAATT---TTTTGCCAAACTTAGTAACTCTGTTAAATATTTGGAGGATTTAAAGAACATCCCAGTTTGAATTCATTTCAAACTTTTTAA---------------ATTTTTTTGTACTATGTTTGGTTTTATTTTCCTTCTGTTAATCTTTTGTATTCACTTATGCTCTCGTACATTGAGTACTTTTATTCCAAAACTAGTGGGTTTTCTCTACTGGAAATTTTCAAT-AAACCTGTCATTATTGCTTAC-TTTGATTAAAAATTTGTCATTTCCTTTATTCACCTACTAGATTTT chr4 + 94230402 32283276 32283275 32284797 32283276 32283275 32284797 1522 ATTCTGTTTCCAGGGTTGGGGAGCTGAATATCATCGACAAGATGTAACGAGCACTCCATGCTGGATAGAGATACACCTTCACGGTCCCCTTCAGTGGCTGGATAAAGTACTTACTCAGATGGGCTCTCCTCATAATCCTATTTCTTCAGTGTCTTAA--GGTCCCAAGCTCCTGCATTTTGGAAACAATTGAGCCTTGCATGTACTTGAAGGACGTATGAGTCAGACACAGTTTTTTTCATTTTCCCCCCCACCCCGAACTGGCAACAGCTGAATAAGAGCCATGAAAATAATTTACTTCTGTGACCAACTGTTGGATTTGGGGAAAAAAACAACACAACAAAACAAAAAACCAAAAACAAAAAACAACCCCTTTGACATAATACTGTTGGTATCAAGTATC---TTAGTTTACATAGTAACATTCTATTGCAAAGTTGA---------------TTTACAGGCCTT--------GTCATAAAGGAGGCTACTGAGCCA--AAACAACAATCTGTTGGACTGAGTTCACGAAGGAGTTTCCTATAGTTGGCACTCTGAGATTCTCTTCCTTCTTGACATCCAGCACTCACTGCTTTTTTTCCCCCACGTTATCCTCTTGGGCTAAGAGCTGATGTTGGTGAAGCCTGCTTTTAGCAGGCTTTCTGCAGTATGTTTTAAAACCATTTGTTTAAGCTGATAGTTATTCTTCTCTTTATAAGACAAAAACCAACCAAACAAACAAAAAAACCAAACACCTAACATATAGTTTTAATATCAATATCTTGTAATAATCTT--GGAAATTGTGTCCTGACCATAC-TGCTGTAAG---AATGTTAGGTATCT--TTTTTGGTAA--ATGTATTTATGGTGTATTTGGAAGCTTAGAAATCCTTTAGACGTAGACCCATAAAGGAATTAGGAGTATCTGA-----ATGGGGGGAAGAGGGAGTGGGAAGAGATGATGACAACTG-AAATGTAGAATATATTGTAAACAT--AGGTTGTTAGTTT--------AAACTGAGGTCTGAGTTTTGCTGTGCATTTCATTTTTATCGTGGCTTCACCTTGTTAATTCTGACTTTTTTTTGCCTC----TTCCTTTTTCTCCC---------AGAGCAATTGCGCAGTTGGGTAATTCTTTTACCTGTGAAGAGGACGAAATGATTAATTCCTGCAGTTTGAAGGCTGCAGCTCTATGTATTTCAAGACAAAGTTGTACAGTGTGCTCTTTAACTATTGAGCAGTTTTATACAGTGTATGTA--ACAGAAATAGGCTTTTAATTTTGTAAGAGAGTCTTGTTTTGCCAAATCTAGAAA--CTGTTAATTGTTTGGAGGGCTTCAAA---ATCCCCATGTGGGTCTGTTTCAAACttttaaaaatatatatatttttaattttttttaC--TGCTTGG-TTTATTTTCTTCTCTTTGATCTTTTATATTCACGTAAGCTGTAGTACTTTAAGTACCTTTATTCCAAACTTAGTGGGTCCTCTTTACTGGAAGTTTCAAATAAAACCTGTTGTTACTGCTTACATTTGATTAAAACTTTGTCTTGTCCACT----TCTTAGTAGATTTT ..x:.x..:.:....:........x.....:..:..x..:.....x..x.....:..x........x........:..x.....:.....:.................x........:.....:..x.................x..x..:......--..:....:..x:....x.:.x.:....x..........................:.x.............::..x---------------------x......:...---------.:.....x...x....x..x..:.....................::.-------------.x.x:x.........---.....x....x...xx.x.:...::.xx.........:.......x.:.---...........x..............:...:.::.---------------..x:....x...--------..:.x.:::...::x:.::.....--:.xx..:x:...:..:..xx:x.x..x::.::..x.:.::x:.:x........:.:..:.:x..x.:xxx.-x..x:.::....:.x.:x.---..x...:xxx...-.:.::.x.::..:.x.....:x......----..:..x.....x:::..:...---..xx..:.........:.........:--:...:...----..x.::x.x....-------------------------------------...x:xx..:.:..:..---:....x-::..........--x:.......:.x..........-......x..---....:....:..x.--......x...--......x..::.x...........-...::...:xx......---------..:x.:.x..........:...-----:...............------------:..........-.........x....:......x..--..x.....:x...--------.......x::....:..........--....xx....x.x.x.::..-----------..x.x.:......:.x:...----...:........x:---------.:....:..x:....:...x......x.x..x......----..xx......x..........x:..:x:.:::...----...::.:......x..-x....:..::.x.....-.xx.x:..x.:.........-...:.x..x.::.--............-.........-:...x..:.:---..........::...x..--.......x.:........::..x..:---.....x:.x..::.:::............x..---------------.x......x...--..:....-.........:.:::x..:.......:.......x..x...x.x....x..:.....:...........x:........::...:........:...:x...-........::...:.......-...........x......x.x...x:.----x.:..x........ 157M2D75M21I11M9I47M13I15M3I49M3D35M15D12M8D24M2D71M1I19M3I13M1I28M4I21M3I27M2I8M4I13M37I17M3I6M1I12M2D22M1D9M3D14M2D10M2D24M1I17M9I22M5D16M12I11M1D24M2D13M8D25M2I20M11I20M4D14M9D38M4I35M4I16M1I17M1I20M1I13M2D12M1I9M1I10M3I18M2D26M3D32M15I12M2D7M1D101M1I21M1I27M4D14M 1023/1349 75.8% 1522/94230402 0.0% 256/1349 19.0% 113274502 76940053 +3284 chr4 + 190214555 145573354 145573353 145573435 82 AATGGAGTGGAAAGAAAGAAAGAAAGAAAGAAAAGAAATTGCAACAGTGCTCCTTGTTACTCTAGGATT---ACAAACCCTGTGA chr4 + 94230402 33989504 33989503 33989588 33989504 33989503 33989588 85 AATTTAATGCAAAGAAAAAAAAAAAGAAATACAAGAAATTGCAACAGTATCTTTAAATAAATTAGGACTTGAATAAATACTGTAA ...xx.:..x.......:...:.......x.x................:::::.x:x..xx:.....:.---.:...:x....:. 69M3I13M 58/82 70.7% 85/94230402 0.0% 3/82 3.7% 111583850 78630705 +3462 chr4 + 190214555 145585265 145585264 145585322 58 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x....:.:...........::........x.x:.x...x::...........:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 69552058 NA +17294 chr4 + 190214555 145639053 145639052 145639633 581 AACATGTTTTTCTTTCTTCTAGGGAGGTC-ACAATCACATTGAGCCAAAACGCATCCAGTGTTTTCTCCAGT--TACAAATAAAACGAATATGCCC---ATGCTGCTACCACATCCTCACCAGCATTTC-CTAAAAGGCCTT---TTAAGAGCACCTTTCCGATGTTACCACTTCATCTTTCACTCAAGTACTCATCTCGGATCAGGAATCCCATGTGCTCAGCCGTTTAATTCTCTTGGACTCCATTGTACAAAGTGGATGCTGCTGTCAGATGGCTTAAAGAGAAAATTATGTGTACAAACAACCTTAAAGGACCACACAGAAGGACTTTCTGATAAAGAGCAAAGATTTGTGGATAAACTTTATACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGAGTTAGCCCAGGTGCTTCTTCAGAAAGTATTACTTTACCACAGAGAACAAGAACAATCAAATAAAGGAAAACCACTAGCATTTCGAGTAGGTCAGTCTTTTTTGTGTGTTTTCTCAGTAAATATTTTTACAAATTCTCTGTATTC chr4 + 94230402 32303005 32303004 32303550 32303005 32303004 32303550 546 AACATGTTTTCCTTTCTTCTTAGGGTTTCTGCAAGCA----GAGGTGAAATG-ATACA------TCTCTGGTACTCCAAACAAGATGAAGATCCCTTCTGTACTGCTGAGATTCCCTCATCATTTTTTCTCTAAAAGAACTTACTTCAAGAAC--------------------TTGACTTTCATTT-----------CCAGATCAGATTTCCTGTGCGCTGAGTCTCTTACACCAGTGCATCTACACTGTTCAAAATGGATGTGTTTGTCAAAGTGTTTGAGCAGAGAGCTATGTCACCAAACTGCCCCTGAGCAGGAAGCAGAGGAGCTTTCCAACAGAGAAAAAGGACTTGTAGACAGACTTTACAATGGGCTTGTCCAGGGTCACAGAGCCTGTTTAGCTGAAGCCATTACACTTATAGAGTCAACTCAGACTAGGAAAAAGAAAGTAGCCCAGGTGCTCCTTCAGAAGGTATTATCCTACCACAGGGAACAAGAGAAGTTAAATCAAGGAAAGCCACTTGCCTTTAGAGTGGGTTAGTCCTTT---TATGCCTGTTCAGTGGTTGCTTCCGTAGAATGACAGCGTTC ..........:.........x:..:xx..-:...x..----...x::...:.-..x..------....::..--.x....:..:.:...x..x..:---:.:.....:xx.:x:.....:..x:x....-.......:x...---.:....:.--------------------.::x......:.:-----------:.:......:xx...::..:...x..:.x:...xx:.xx.xx:x..x..:...x....:......:xx:.....:.xx.:..:.:x...:.::.....xxx.....x:..::x:..x.xx.x:....:.::.....::.:.:...:x..:..:....:..:.:......:.x...x:.x:....:..x..x..:...........x..:.....x..x...:....:........x.x:.........:.:x.............:........:......:::........:........:x.:.:....x.......:.....x..x...x....:...:....:...---.:..::.x:.....::x.::..::::.:.x.xx.x.::... 29M1I7M4D11M1D5M6D8M2I22M3I30M1I12M3I8M20D13M11D350M3D41M 365/536 68.1% 546/94230402 0.0% 55/536 10.3% 113336048 76878507 +8858 chr4 + 190214555 145642360 145642359 145642505 146 TAGGATTGTCTGGGCCCCCTGGTGCTGGAAAATCAACATTTATAGAATATTTTGGAAAAATGCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGCTGTGGACCCTTCTTCTTGTACTAGTGGTGGTAAGTATGGCTGATTCTTT chr4 + 94230402 32304590 32304589 32304735 32304590 32304589 32304735 146 TAGGGTTATCTGGTCCTCCTGGTGCTGGGAAATCAACTTTCATTGAATGCTTTGGGAAAATGCTTACAGAAAGGGGACACAAAGTGTCAGTGCTGGCTGTAGACCCCTCCTCTAGTACAAGTGGGGGTAAGTAGGTCTTAATGTTT ....:..:.....x..:...........:........x..:..x....::.....:...........x..:..:..:......x.:..x.....:.....:.....:..:...x....x.....x........x.x..x.x.x... 146M 116/146 79.5% 146/94230402 0.0% 0/146 0.0% 113337770 76876785 +11710 chr4 + 190214555 145645977 145645976 145646163 187 ATGTTTTAGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAGAGATATGAATGCATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCACAAATGAAGCTATTCTGTTGTGTGAAGGAGCGGGATATGACATAATTCTTATTGAAACCGTTGGTGAGTG chr4 + 94230402 32305820 32305819 32306006 32305820 32305819 32306006 187 ATTTTTAAGGTTCTTTATTGGGTGATAAAACGCGGATGACTGAGTTGTCAAGAGACATGAATGCATACATCAGACCATCTCCAACCAGGGGGACGTTAGGAGGTGTAACAAGGACTACAAATGAAGCCATTCTGCTGTGCGAAGGAGGAGGCTACAATGTTGTTCTTGTGGAAACAGTAGGTAGGTG ..x...x...x..x:.x..:...........x..:...........:........:.................:........x..:..:..:..x........:..:........:...........:......:....:.......x:..x..::.::.x:.....:.x.....x..x...::... 187M 149/187 79.7% 187/94230402 0.0% 0/187 0.0% 113340157 76874398 +6744 chr4 + 190214555 145651047 145651046 145651153 107 GATTTACAATTTCAGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGTTTGTTTTACTACTGCCACCAGCAGGAGGAGATGAGCTGCAGGTAATT chr4 + 94230402 32306513 32306512 32306619 32306513 32306512 32306619 107 GATTTAATTTTTCAGGTGTGGGACAGTCAGAATTTGCTGTGGCTGATATGGTTGATATGTTTATATTAGTGCTGCCACCAGCGGGTGGTGATGAATTACAGGTATTT ......xxx.............x.....:..:........x.....:........:......:.x...x.:...........:..x..x.....::.:......x.. 107M 87/107 81.3% 107/94230402 0.0% 0/107 0.0% 113344534 76870021 +3301 chr4 + 190214555 145652590 145652589 145652659 70 CATGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--..:.x......:...........::........x.xx.x...xx:.........:.:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 69619393 NA +10708 chr4 + 190214555 145653985 145653984 145654155 171 TCTCTTTAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAAGCTTGCTT chr4 + 94230402 32307162 32307161 32307332 32307162 32307161 32307332 171 TCTGTTCAGGGTATCAAACGGGGTATAATTGAGATGGCAGATCTAGTTGCTATAAATAAAGCTGATGGGGATTTAATTGTGCCTGCACGGAGAATACAAGCTGAATATGTTAGTGCTATGAAGCTGCTTCGCAAGCGTTCAAAGGTTTGGAGACCAAAGGTGTGTATACTT ...x..:...........x..........:..............:..x...:...x....x.......:..:..:........x..x..:..:........x........x.....xx....::.:..:.....:......x.:..:....:.........:x.:x.:... 171M 137/171 80.1% 171/94230402 0.0% 0/171 0.0% 113346823 76867732 +16233 chr4 + 190214555 145655129 145655128 145655421 293 TTCTTCCCTTTTCGATAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCCCAGGACTAGCAGCAGACTTCTTGTTAAAAGCTTTTAA chr4 + 94230402 32308707 32308706 32308999 32308707 32308706 32308999 293 TTCTTCTGAATCCAACAGGTAATGCGTATCTCCGCCAAAACTGGAGAAGGTATCTCAGATATGTGGGATAAAATGACAGAATTTCGCGACCTCATGCTCACAAGTGGTGAGCTGATTGCCAAACGACGGAAACAGCAGAAAGTGTGGATGTGGAATCTCATCCAAGAAAATATGTTGGAACATTTCCGGAGTCACTTGGCAGTCAAAGATAAGATTCCACTTCTAGAAGAAAAAGTTCTTAGTGGTGTGTTGTCTCCTGGGCTGGCAGCCGATCTGCTGCTGAAAGCATTCAA ......:xxx.:.:.:.......x.....:..:...x:..x......:..x.....x..x................x...x..:.:x.....x.....::.x.....x.......:...............:..:........x.................:..:....:.:....:..:......x...x:...::x:.....x::..xx.............:...x....:.....:.x...x.:x:....:..x..:..:.....x..::.x:..:.:.....x..:.. 293M 222/293 75.8% 293/94230402 0.0% 0/293 0.0% 113346422 76868133 +3013 chr4 + 190214555 145671027 145671026 145671093 67 TAAACCTTTTATGGATCAGTTTCTTCCTCTGCAAAATGAAGACAATAATGGTGCCTTTCTCATAGGG chr4 + 94230402 49285223 49285222 49285289 49285223 49285222 49285289 67 TAAACGCTTCATCTATCATTTTCATCCTGTATAAAATGAAGACAATGCTTGTCTTCTTCCCAAAGGG .....x:..:..xx....x....x....x.::..............:x.x..x:::...:..x.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 96385804 93828751 +3067 chr4 + 190214555 145690376 145690375 145690434 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 69657170 NA +3261 chr4 + 190214555 145696901 145696900 145696979 79 GTGGCGCATACCTGTAATCCCAGCTACTTGGAAGGATGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...--.x....:.:...........:....x....x.xx.x...x::.........:.:..x:xx:..:..:.. 8M2D69M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 69663700 NA +3403 chr4 + 190214555 145697036 145697035 145697095 60 AAAACAAAACA-------------AAACCAACCAACCAACCAAACAAACAAACAAAAACAGACCTACTCTCTT chr4 + 94230402 57454507 57454506 57454579 57454507 57454506 57454579 73 AAAGCAAAACAGCGACAACAACAAAAATCAACCAACCAACCAAACAAACAAACAAAAACCCACCAAACCACTT ...:.......-------------...:...............................xx...x.x:.x... 11M13I49M 52/60 86.7% 73/94230402 0.0% 13/60 21.7% 88242529 NA +3314 chr4 + 190214555 145721531 145721530 145721588 58 GTGGGAATTTTGTTTTGTTTTCCTCTCTCTATTTTAAATTAGAAAACAGACTAAGAAA chr4 + 94230402 59079134 59079133 59079191 59079134 59079133 59079191 58 GTGGGAATTTCAGTGTGTTTTCCTTTCATTATTTTAAACTTGAAAACAGAAACAGAAA ..........::x.x.........:..x:.........:.x.........xxx..... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 86642397 NA +3589 chr4 + 190214555 145724748 145724747 145724826 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGGATCCCTTGAGCCTGGAAGTTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:............:........x.xx.x.:.x.x.....:..::....:.xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 69691547 NA +3271 chr4 + 190214555 145728019 145728018 145728066 48 ATAATATATATTATATATAATATATATATACACACACACACACACACA chr4 + 94230402 30834189 30834188 30834236 30834189 30834188 30834236 48 ATGGTATACAATATGTATTATATATATATATATACACACACACACACA ..::....:.x...:...x...........:.:............... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 114893830 75320725 +3029 chr4 + 190214555 145728025 145728024 145728068 44 TATATTATATATAATATATATATACACACACACACACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....:x....:..x..........:.:.:............... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 114893832 75320723 +3180 chr4 + 190214555 145740205 145740204 145740281 77 ATGCTTTCCAAATTATAGCTATCTCTCCCTTTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAAT chr4 + 94230402 39561962 39561961 39562038 39561962 39561961 39562038 77 ATGCTTTTGGTATTACTGCTTTGTCTCTCTTACTGAGACAGGAAAAAATAAAAAATAAAAAAGGGAGGGAAAAAAGT .......:x:x....:x...x.x....:...x...x:.x.::......x......x......:::.:.:x.....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 106178243 84036312 +3226 chr4 + 190214555 145740218 145740217 145740297 80 TATAGCTATCTCTCCCTTTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAATAAAAAAAAGTGACAAT chr4 + 94230402 12156644 12156643 12156723 12156644 12156643 12156723 80 TAGAGCCAGCCTTCACCCTCCACAGGCAAAAAGAAAAAAAAAAAAAAAACAACTGGTGAGAAGCAACAACAGGTGAGAAT ..x...:.x.::..x.::..::..::x.....:................x..xx.:::.:..::..x..x.:....x... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 133583574 56630981 +3293 chr4 + 190214555 145747666 145747665 145747751 86 CCGCTTCTTTCCCTCCCT-------CCCTCCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCTCTCTCTTTCTCTTTTTCTTTTCCTTC chr4 + 94230402 84992617 84992616 84992709 84992617 84992616 84992709 93 CCATTTCTTTCCCCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCCCTC ..::.........:x:..-------x:.......::..::......:...:.:.:......:..x..x:..:.:....::x:.x.x.:..:.. 18M7I68M 57/86 66.3% 93/94230402 0.0% 7/86 8.1% 60755049 NA +3133 chr4 + 190214555 145747705 145747704 145747757 53 CTTTCCTTCCTTCCTTCCTCTCTCTCTTTCTCTTTTTCTTTTCCTTCCTTCCT chr4 + 94230402 70062265 70062264 70062317 70062265 70062264 70062317 53 CCTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTT .:....:.x......x.:......x....:.:.....:........x:...:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 75685440 NA +33592 chr4 + 190214555 145757605 145757604 145758366 762 AAAAAAGAAAAAGAAACAAGAG-TATAGCCAACCTTTTTTTTTTTTTAATTAGAGTATATTATACTTTCAAACTGGATACACTAGAAATTGGCAATGCAACATAAGATGCAAAGGAATATACCAGTTACTGTCAAAATGACCCTGTACAGCCTCGTAATGCAAAAAGCTTTATACAATACAAATTTTCAGTAATGTACACAAACCTTGACAGTATGATCATCTGAACATAATATGAAGAGTTAAAAAAAGGATAGAAGAAAG---AAAGTGCTGAGAACCCTAACTGCATTACTATATGGAAAAATAAGCTAGTTTTCATTGAAGAATGCATAGTGAC-AACAAT--TGAAGTTAGT----TGGT-AGGTGAATTTCTCAAAGATGTTAGTGTTTTATACGGAAAGGATATCTATGGAATACA-TCCTTCCCTGAGTATCAAACTGCAAACCAAATTCAGGGGTACATATTTTCTAGGGTGGAGTCTGAAAAATGCTGTAGATTTTTTTCTTTATTAATAACAATAATAATATAAAAAGTCAAACAAACTCCAAACACACCTTTTCTCACTCAGAAAACTTTTATAATTTACCAGAAAGATTGA--TGACTCTTTCCAAAGTGCTAAAAAAGTTGCCCAATTATATTAAGCATTACTAAGTCATTCAAATACAAGTTCAGTGGCAAGCAGTGAAATGCATGGCATTTGAGCAGTAAACGTCTCCTTCCTTCACCTCCTCTCGTTCTTGAAAGTTTCAACCCTAGACCTCCTATTGCA chr4 + 94230402 32332941 32332940 32333645 32332941 32332940 32333645 705 AAAAAGCAAAAAGAAACAAGGGGTATAGCCAACCTTTTT--------AATTAGAGTATATTGTACTTCCAAACTGGATACACTAGAAATTGGCAATGCAACATAAGATGCAAAGGAATATACCAGTTACTGTCAAAATGACCCTGTACAGCCTTATAATGCAAAAAGCTTTATACAATACAAACTTT-AATAATGTACACAGACCTTGACAGAATGAT-ATTTGAACATAATACACCAAGT--AAAAAAATACAGAAGAAAGAAAAAAGTGCTGAGAACTTTAACTGAAGTACTGAATGGAAAAACACACTAGCCTTCATTGAAGAATGCATAGGGATAAACTATTATGAAATTAGCTTTATGGTGGGGGGAATTTTTCAGAACTGTTGGTCTTTAATAGGTAGGGGATATCTCCGGAACACATTCCTTTCTTTAGTCTTGAACTGCAAACCAATT----------ATGTTAATATGCATGAGCTCTGATAAATACTGT--ATTTTTTTCT-------------TAAAAAAATAAA---------AACCTCCTAACACACTTTTCCTTACAGAGAAAACTTCTATGACGTACCAGAAAGAATGAATTTATCCTTTCCAAAGTGCTAAACAAACTTCCCAGGTATATTAGACATTACTATG----TCAGGTACTGGTACAGTGGAACGTTGTTGAACATGTGGCATTCGTGTGCTGA-------------------CAGCTCATTCTTGGAACTTCCAGCCTTA---TTTATATTGCA .....:x.............:.-................--------..............:.....:.....................................................................................::............................:...-.:...........:..........x.....-..:...........::xx:...--......:x.:.........---..............::......x.x....:x.........:.x:....::...................x..:-...x..--....:....:----....-:..x......:...:.:x....:..x...x...x.x.::........x:....:...-.....:.:.x...x.::.............x.----------..:..xx:xx.x:..::x.....x....:....--..........-------------...x..x.....---------..x....x.......:...:..:..xx.........:...:.:x...........x...--.x.::.................x..::.x....:x.......::........x.----...::...x:..x......x.x.:x..x:..::::.......:.x.::x.:.-------------------.xx...:......:..x..:..:..:..---:.:x....... 22M1I16M8D140M1D30M1D22M2D19M3I73M1I6M2I10M4I4M1I57M1I32M10D33M2D10M13D12M9D59M2I54M4D52M19D28M3D11M 560/690 81.2% 705/94230402 0.0% 87/690 12.6% 113424664 76789891 +97216 chr4 + 190214555 145758993 145758992 145761610 2618 ACTGACTAGAGGAAGAACATTAGGGATGCTTTTATTTTCCCCTGGTGAAACAGATTTTAAAAAACCCCAACTCTTAGGATAACACATGATGGAAAACAGCAACACAGTAAGAAAATGTTCCTCCTGTACACCAGTTCTCCAATAGATAAATAATATATAAACTTTTATATTCCAAACTTCCCATTATTATACAAAGAACATTTCTTCCTGCTCTTTCAGCCTGTTTCATACTGGAAATTCTGTTGTTTTAAAAATACAAGCAATGAACATATTCAGCCAAAGATTTTTTTCCTTTTTTCTTTTTAAATCACCCATTACTTTTTAAGATTAGCAAAGAGCTTTACAACCAACCCACACCTGCTTCCTGCTGCAATAAAGTGCTGCACATAAATTGCCATTTT-AATGACCACAAAATAAGAGCTTTTAAATAAGTATAAAGTTAGCCTCCTAGCAGGTTACA-TCTACCAGGCGTTAACAAAATGGAATACAGAATTACTAATAACATGGAGGATACCACGATTAG-CCAGAAGATCGGCAAAACACAATGGAAACTTGTCAGGGGCATAAACTGAACCATAGGACT-AAACAGCACCTTTTTGTTGCGTCATTATATGTCAAAGAGGTTGTGGCTAAATCTTCAAACATACAGTCTACTCATTCCATAAAAAAGGTACATTTTCTTCCTTTTATTTTA------CTTTTTTTTTTTCAGATGAGAAACAAAAACTAGTGCAAGACCATAGCACTGTGCAAAACTGCCATTTCTTTTTTTT-AGTCTGAGCATTTATACCCAGAATTTATCCAAACCCCTTTTAA--TCTCCTTGGCTGGATTTATCAACCATAAATTTTTTCACCCATACATTTCT------------TTTTCCTGCAAAC-AAATGGTAACCACTGAATTAATACATCTCATATATATATATA-----------ATCTGCCCTT-----------------------------------------------------------------AAAAAATGA---TGCACTGTGTGTGTGCACCGTACACATTTGTCTACGTGTGGGCACACACACAAAACACACTTAAGTT-CTGTGATGTTAGC-TGCAGTGCTGCGAGATATTTCTTCCAGATCAGTCACTTGATTCCTCGCCTCTTCATCACCAGAGAAGATCTGAGCGCAAGGTCTCCAGCGCTCTGGCGGAAATCTCCAGCAGCACTGTAG--ATGGCTACCATTCCTTCATCGACTAAGCACCAGGCCCTACC--ACTCTGTAGCCATCAAAGAGA----GAGGGAAAGGTGATGAAGGAGCACAGGGAGAGACTGTCGTGGATGAACAACCCAGGAGGGAAAAGAACGTTCATCGCTGTTAAAGAAGCCAGTACAAAGAATGTGCAATAGAAATGTCATGGCACACG-ACACACGGCTTTCTCTTTCAGAATCCACAAACGCCCACACACCGCATTCACCCAACAGAAAACCAAATGCACCAGTATATAAGCTTACAAGTGCTGATTGCTATTAAGGACACTCTCTTTAGGGTTTAACAAGACAAGAT-TCCTTTCAGAGAAAAGTACGGAGAAGGGCTGAGAGTGGGAGTGGGTGGCTGGGGAGGCATGCCTCTGAAGGTAGAAGTATGCAGTAGGTCACCTCTCTGAAGATTGGATAAAGCAGCTTTCAGGTCAATGCAATAGGTATACACACAGAGCCAATTTTCTATTCCTTACTAAAGATATACAGTACACATGTTCCAGACCCATCGGGGTCTGTAGGTTTTGCAGCAACATACACCTGCTGGGGTTGTGTTTAAGTTTTGTGGTTTTTTTTTTTTTTTTTGTCTTTTGTCTCTCTGTTTTTGGTACAGAACATGGCTGCCCTCAGACAGTCTCTGCTCTTTCTCTCAGTCCGAGATAGGCCAGGAAGGAGTGTTTGGGTGAGGGGATGCTGGGAGGCGCAGTCTGAGGTCGGGGAGGGTGGAATGTGAGATCCAAGTGGTTCTTGGGGTATAACATTGTCAAGGGAATGAGATGGGCAAAATCTGAGTTCCGGTACTTGTCAAAGCGCAAAGGGGAGCCGTTGAAGGCCAAAGCCTTGAGTGCCAGGTTGGGCTCTGAGCTGCTGCCGTGGGCTGCCGACAGGGCCACGGTCTGCAGAGCCTGGGAGGCAGACATAACTGACAGGGGAGACAGGAGATTCCGGGAGCTCCCGACCACCAGGAGCGGGGCCCCCGGGCCGGCCGGTTCCTTGGGGGCTGGACACAGGCCCTTCTTGTCCTCCTCGGGGCAGTCCCCACTCTGGTGCTTCTTGACGTGGCGGCTGAAGACGAAAGGGTGTGTGGTCTTGAACAGGCACTCTTCGCAGCTGAAGGTCTGGCGTGGGGCGTGCTTCAGCTTCTTGTGCAGGTTGAGATTGTCCTTGCGCTTGCAGCTGTAGCTGCACTGGTCACAGTGGAAGGGCCGCTCCCCGGTGTGGACGCGCACGTGCTCGATGAGCTTGTTGGCGGTCTTGGACAGGTAGCCGCACTGGTCGCACTTGTAGTGGTTGCCCAGGCGGTGCTCCCGGGTGTGCGTCTCCAGCTCCAGCTGGTTGGCCTTCACCGTCTGGCAGATCCGGCACTTGTACTCCATCTTGTAGTGGGTCTTGAGGTGGCACTCCATGGCAGCGGGGCGGTTGGTGGAATAAATGCAGAATGGGCACCTGCCGGGGAAA chr4 + 94230402 32334651 32334650 32337111 32334651 32334650 32337111 2461 ACTGAAAAAAGTGAGGAGGTCAGACAT--CTCCAATACCTGCTGGTGAAAGA-----CAGCAAGATCTAATTCCAAG----AGACACCATGGAGAACAGTAATCCAGTAAGAAAGTATTCCT---GTA----AGTCCTGTGGTA-------ATTTTGAAATGTTTCATATTTTATATTTCCAATTTTAATGCAGAGGATTTTTCATCCTGATCTTT-------------------AGATAAGTTGTCTAAGGAACA-AATCAATTAACA------------GACAGTTTCTCTTCTTTC-----ACATCACTGTTGTCATTTTGAGATTAACAAAG-GTTATACAACCACTCTGCATTTGCTTCTTCCTGCAATAAAGTGCCACATATAACATGTCATTTTTAATGACCACAAAGTAAGAGCATT-AAATAAGTACAAAGTTAGCTTCCTAGCAGTGTATGCTCTATCAGCCATTAACAGAAAGGAATAAAGTATTACTAACAATGTGGAGGGTATT--GATAGGACCGTAGAATCTGCAAG-TACAATTGAAA-TAGTGAGGATATAAAAGAGAACTGTATCTTTCAAACAGTATCTTTTT--TATAGCTTTATATTTCAAAG---TTATTGGTACCTTTTCAAATATACAGTCT--------------------------TATTACTTTCATCCTGTAGAATCTTTTTTTTTTGCAACTGAGAAACAAA--CTAGTGCAAGACTAAAGCACTGTGCAAATCTGCCTTTTTTTTTTTTTTAGTCTGAGTATTTATACCCAGAATTTATCCATACCCTTTGTAAAATCCCCTTTGTTGGATTTTT-----------TTTTTCCACCATAGATTTCTCGTTATACAAGTTGTTCCTGCAAACTAAAAGGTAACCACTGCAT-AATACAGCATATATGTATCTATATATAATATTTTATATGTCCTTTTAAAACAAAAGATGTATGCTATGACCCAGACTCAGGTGTCTGTTACACCTGTGTAACAGCTAAGAAGAAATGAGCCTGCTGTGTGAGTGTGTACACTGCACATGC----ACATGTGGGTGTACACACACA-CACATTTTCATTGTTATACTCTCATCCTGCAGTGCTGAAAGCCACTTCTTCCTTATCAGCTC-----TACCCAAAATCTTCAAACCCTGACAA---CTCAATACAAGGCATCAAACAA-CTAAATGATGCTGCATGCAGCACTGAAATAATGAC-ACCAGTCAACCCCAGACCAAGAGTTACTCCCGCCCCAACTCTACAGT--TCAGGGGGATACAGAGGGAAGGG--------------AGGGAACGAGTGT------------GCTCAAGGGAGAAAA--------ATAACAGATAAATAAACCAGTATAAGGGATGTGCAAAAGCAGTGTCATGGCACGCTTACAGAC-----TCTCTTTCA-----CACACCCACACGCACACAAAGACAAAGAAAAAAAAAAT--AATGCATCAATATGAAATCTTACAAGCGCTGATTGCCAGTAAGGACACTCTTTTTCAG-CTTAACAAGACAAAATATTTTCTTAGATAAGAGTACTGGGAA--------------------------------CATGC---TGAAGGTAGAAGTATGCAGTAGGTCACCTCT-TGAAGATTTAATAAAGCAGCTTTCATGTCAATGCAATAAGTATACACA--GAGCCA-TTTTCTAAACCTTACTACTGATATA--GTACAAATGTTCATTACCTCTTCGGTT---TACGGTTTGCAGCAATGTATACCTGCTGGGTTTGT----------TGGGGT-------------------------------ATTTTTGGTACAGAATGTAACTGCCCTCAGACAGTTTCTGCCCTTTCTGTTAGTCCAAGGTAGGCAAGGAAGGAGTGTTTAGGTGAAGAGGCACCTCCCGGTGCAGTCTGAGGTGTGGGTGGATGGAATGTGAGACTGTAGTGGTTTTTGGGGAAAAACATCGTTAGAGGAATAAGGTGGGCAAACTCTGAGTTCCAGTATTTATCAAAGCACAGGGAAGTGCCATTGATGGCCAAGGCTTTCACTGCCAAGTTTGGTTCTGCCCCACTGCTGTGTGCAGCTGACATAGCCACTGTTTGCAGAGCCTGGGAGGCAGACATAACTGAGAGGGGTGACAAGAGGTTTCTGGAGCTGTTCACTGGTAGGAGCGGA---------CTGGC---TTCCTTAGAGGCTGAATACTGGCCCTTCTTCTCCTCTTCAGAACAGTCCCCATTCTGGTGCTTCTTCACGTGGCGGCTGAAAACAAAAGGGTGGGTAGTCTTGAACAGGCACTCGTCGCAGCTGAAAGTCTGGCGTGGAGCATGCTTCAGTTTCTTGTGCAAGTTGAGATTGTCTTTGCGTTTGCAGCTGTAGCTGCACTGGTCACAGTGAAAAGGGCGCTCACCAGTGTGGACACGCACGTGTTCTATCAGCTTGTTGGCGGTCTTGGACAGGTAGCCACACTGGTCACACTTGTAATGGTTGCCAAGGCGGTGTTCTCGGATGTGCATCTCCAGCTCCAGCTGATTTGCTTTCACTGTCTGGCAGATCCGACATTTGTACTCCATCTTGTAGTGAGTCTTCAGGTGGCACTCCATTGCTGCAGGGCGGTTAGTGGAGTAGATGCAGAATGGGCACCTGGCACAGAGA .....xx.:..x:..:.x:.:..:x..--:.::.x.x:.:x.........x.-----:.:x..:x:.:..:..:x..----.x...:x.....:.....:..:x..........:.:.....---...----...:..x:::..-------.x.x.:x..xx...:.....::.x.:....x...x.x..:..:..:.:x....x.....x.....-------------------.:x.xx.....:.x.::..:.-..x....x....------------..:xx...::...:....-----.x.....:xx.xx.x....:......:.....-.:.x........x:.::..::......:.x..............::..:....xx..:......-............:.......x..-.........:.........:.........xx..::-....:...x.:......:..x......x..x........:..::......:..::--...x:.-..:x.::...x....:-:.....x....-.x..x...:xxxx...xx....::..xxx:.-......:.:......--.:::x.x......x......---..:.x.x..xx.:......:.........--------------------------.x..x....:..::.:------...........x..:x...........--............:.x.............x.....x...:........-........:......................x....:..x...--..:....x.:.......x.-----------......xx.....x......------------.x...........-...x...........x..-......x.x:....:...x....-----------..x..:....-----------------------------------------------------------------..:......---...xx....x.....:..xx.:.....x:----..:......:::.......x.-....:..xx:..-:.:.:x.x.:.x.-..........x:..x:.:.......xx.....::x-----.x..:x:xx......xxx..x..x..---..x.:::.....:x..x.:.:x-..::xx..x:::x.xx.........x.:--...:.-....x..xx:.x:x...:...x:::.xx...xx..--.....::..:--...::.:..----.......:..--------------.....:x..x...------------:.:..:.:.:.....--------..x:.x.x....x..:......:..:.:........x..x.:...........:.x-...x..-----.........-----....xx.:.x.:.....x:x:x:x.xxx..x.:....:--......:..:...:x..x........:.........:.x............:...x:.-:............:..-.::.:.:...x..:.....x.:...--------------------------------.....---...............................-........x:...............x............:.........--......-.......xx........xx......--.....x......xxx...:x.:x..x.---..x.x..........::..:..........x....----------..x...-------------------------------:..............::.::...............:.....:......x.:.....:..:.....x..............:.....:.:.:::.:xxxx..:............xx...x..:............::xx.......:......x.x.....:..:.::.....:..:........x..........:...:..:.......:..::.::.x...:....x......:..:..x.x.....:...x..:....xx.::....:...x..x..:....x:.....x..:.............................x.....x....:...:..:.x......x::x..::x:........:---------.:...---......:.:.....:.:..x..........x.....:..:.::.........:.............x..............:..:........x..:.................x...........:...........:..:........:..........:............:.....:.............................:..:..x.....x..:........:........:..x..x.............................:........:........:........x........:..:...:.....:................:..x..:.....:..............:..:....................:.....x..............x..x..:........:.....:..:..................x.:x:..:. 27M2D23M5D20M4D41M3D3M4D12M7D65M19D21M1D12M12D18M5D32M1D64M1I23M1D35M1I55M2D6M1I16M1D11M1D31M1I15M2D20M3D29M26D16M6I27M2D47M1I43M2I19M11D20M12I13M1I18M1D23M11I10M65I9M3I29M4D21M1D12M1I13M1I35M5D26M3D22M1D28M2I5M1D35M2I10M2D9M4I10M14D13M12D15M8D56M1I6M5D9M5D38M2D58M1D16M1I25M32D5M3D31M1D48M2D6M1D25M2D27M3D35M10D6M31D372M9D5M3D469M 1813/2344 77.3% 2461/94230402 0.0% 391/2344 16.7% 113424342 76790213 +20164 chr4 + 190214555 145764953 145764952 145765747 795 AACGCAGTAAAAGGTTCTGTACTTGCTTTCCTTACTTGAGCCCACCGGTGGGGACAGTGTGGCATTTCTTATGCTCCAGCAGCTGTTCGGGGGTCTTCATGAACTTGTGGCACACATCACACTCAAACATCCGGGTGATGAGGTGTATCTGCAGATGACGCTCAAACATGTTCTTCGTCTTGCAGACAAAGTTGCAAAAAACACATTCGAACCCTGCAAGGACCGAAGCTGGGTATAGAGGTGCACAGGGCAGCGGGGAGAGGAGGGCAGGAGTGGAGCCAAGCTCCTCCCCACTTCCTCCCGCCTCCTCCGACGCCTGACAGCTATACCCTTCCAGGCACTGTTCCCCATATCTCTGTGCTAAAAGGAGTTAAATGTACAAACATCGGAATCAATGTCACCCTCCCCATCCTTCCACCCCATACTCGGATTCAAATTAAGCCAAAAGAAATACAACCTTTAGGTGAGGCCCAGCATACTGCATCCTGGGCCTATTATCAGTTTTTGACATCGCTCCTGTGCAGGGCTTATTCTCAAGAATGGGTCATCCTGGGTGCGGAGGGTTGAGCAGGCTCACACCCACCTCCTCCTTACCTTTCTCTGGCTTTTCCTCACTGTTCAGTGAGGGCTGGCTCCCAGGCATGACAGAGATGACCAGCAGATTGTTCCCGCCCTTGTTTTTCTGGGAGCCATCTGAATCATCTTTGCTGTTGGCTGAATCACTCAGAGCTGAGAGGGAGGATGAAGAGGGGCTATTTGATTCGCTGGGGGTCTTCCTGTCTTCCCCTGAAAAAT chr4 + 94230402 32339933 32339932 32340442 32339933 32339932 32340442 510 AACACAGTAAAAGTTTGTGTACTTGCTTTCCTTACTTGAGCCCACCAGTGGGGACAGTGTGGCATTTCTTGTGCTCCAATAATTGCTCGGGTGTCTTCATGAACTTGTGGCACACATCACACTCAAACATCCGTGTGATCAGGTGGATTTGCAGATGGCGCTCAAACATATTTTTTGTTTTGCAGACAAAGTTACAGAAAACGCATTCAAAGCCTGAAA-----------------------------------AATGAAAAAAAGGAAAAAGC--------------------------------------ATTCCTGATAACTGTGGC------------------------------------------------------------------------------------------------CGGATCTA-------CTGATAGA------------AGGTGA-------------------------------CAGTTTGTA--TTTGCTT----------------------AATGGGG------------------------------------------TTTTTACCTTTCTCTGACTTCTCTTCAGTATTCAGTGAGGTCTGAGTACCAGGCACTACAGAAATGACCAGCAGGTTGTTTGAACCCTTGTTTTTTGGAGAAATATCTGCATCTTCTTTGCTGTTAGCAGAGTCACTGAGTGCTGACAGTGAAGATGAAGATGGACTGTTAGAGTCACTGGGTGTCTTCCTCTCCTCAGCTGAAAAAT ...:.........x..x.............................:.......................:.......::.::..:.....x.........................................x.....x.....x..:........:...........:..:..:..:..............:..:.....:.....:..x....x..-----------------------------------::x..:.::.:..x.::..:--------------------------------------.:x.....:.:..:.:x.------------------------------------------------------------------------------------------------.....::.-------.::.x...------------......-------------------------------......x.:--x.:...:----------------------......x------------------------------------------.::.............:...:..:...x.:..........x...:x.x.......:x.....:...........:.....:xx:...........:x.:..:x:.....x...x...........:..x..:.....x..x.....x..x..:........x..:..:..x..x..:.....x........x..:..xx......... 219M35D20M38D18M96D8M7D8M12D6M31D9M2D7M22D7M42D208M 409/510 80.2% 510/94230402 0.0% 285/510 55.9% 113425020 76789535 +3039 chr4 + 190214555 145768864 145768863 145768916 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x.x......:.:..:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 144273864 45940691 +3053 chr4 + 190214555 145768866 145768865 145768916 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 90030076 90030075 90030126 90030076 90030075 90030126 51 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ...x.......xxx:...::..............:.:.:............ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 55738790 NA +3071 chr4 + 190214555 145768866 145768865 145768916 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495050 1495000 1494999 1495050 51 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGAT ...x.:.........x.:......x........:.:..:...:.....x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 144273866 45940689 +3320 chr4 + 190214555 145768868 145768867 145768927 60 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATTAGGTATACAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATA---TAGATATGCAA ...x.:.........x.:...............:.:..:...:...---...:...:... 46M3D11M 47/57 82.5% 57/94230402 0.0% 3/57 5.3% 144273868 45940687 +26156 chr4 + 190214555 145774490 145774489 145775099 610 AGACAGGAATGGTCACCTGTGTGCTTGGTGCCAATGTGAGTCTTTATCTCTGCTTCCTCCATGGTGACGAAGTCGCAGGCAGTGCAGCAGATCGAAAACATCCACTGCTCCTTGTCCACGTGGAGTGACATGTGGCTGACAAACTGGACATTGAGCTCGGTCTCAAATCCACACACGTGACAACTACATG--AAAGGG----TAAAAGAAAAGAGGGGGAGAGAAAAGGGTGACACATACTTCTAAATGTAGGCTGTCCATTTATACACAGTACACTCAAGAAAACTGGAATTTGAAACACATTTGTCTCTCCACCAAAAGGTTTTGCATTAGAAAATTCTTCTGCTTTCTGGGATGCCTCTAAAGTAGTCACTGTGCCAAAGAGACTAAGGGCCAGCATCATGTAACAATCACATATGTGTTATAATGATGCTAAATAATCATAAAGTTAATTTAAAACTATGGATTCCAGATGCTGCACATCACCTAATTGATTTCCTTTGGGCAAAGAGATGTGGGGTAGCATTGCCAAGGTATTTAGTGGTGCCGGTCCACTGATAAACTCGGAGAGCACCTCATAGTCCAGGAACCTCTCTCTGGCTCTGGAAACCTTCCC chr4 + 94230402 32343380 32343379 32343984 32343380 32343379 32343984 605 AGATGGGGATCATCACCTGTGTGCTTGCTGTTGACATGAGCCTTCATATCTGCCTCTTCCATGGTGACAAAATCGCATGCTGTGCAGCAAATCGAGAACATCCACTGCTCCTTATCCACGTGGAGGGACATATGACTGACAAACTGGACATTCATCTCCGTCTCAAACCCACACACGTGACAGCTGCAAGCAGAAGGGAATTCAAGTGTAAGAAGCATTAAAAAATAGAGT---ACAAAC----AGAAGCATATTATCCTTCTCTCCATTTTGCA--AAAAAAAACCAAACCTCACTGCACAGTTCTCTTCCTCACTGCTGAACGTTCATTGGAAAATTCTT-TGTCTGCTGAATTGCTTTTAAACTGATGGCCACGCCAATGTGATTAAGGGCAGGCACAATGCAACAATCCTGTACATGCTATAATGATGCTAGATAATCATAAAGTTAATTAAAAACTACAGATTCCAGATGCTGCACATCACCTAGCTGA-TTCCTTTGGGCAATAAGAGGCACTGCAGCTTTGCCAAGACGTTTAGTATGGCTGATACACTGACAAACGGAAAGCGTGCTGCACACTCCAGGAGTTATTTTCAAGCCCTGGAATGGTTCCC ...::..:..x:...............x..:::.::....:...:..x.....:..:...........:..:.....x..x........:.....:.................:...........x.....:..:.................x.x...x........:..............:..:..x.--:.....----:..:x.x..::..x:xx.:.:..x..:..---...x..----.:.x.:.x::.:...x.:.x.x..:xx.:..--x..:.....:::.x:.::xx:....x..x...::.:xx.x:xx.:x:x.x....:..........-..::.x...::x...:.:....x.::.x:.:::.....x.x..:.......x:...:x...:.......x::..::..:.............:..................x.......::.........................::...-.............x:...x.::xx.:...x........:::......:xx..:.:.x......:....xx::..x.::.:x..:.x.......:::x:.:..x:..:......xxx..... 190M2I6M4I29M3D6M4D31M2D65M1D151M1D121M 428/599 71.5% 605/94230402 0.0% 17/599 2.8% 113431110 76783445 +15897 chr4 + 190214555 145775688 145775687 145775982 295 AGAAAAGGGGCCTCGTGATGTATGCCCACAGCAGACAGGTAGGAAGTGTTGAAGTCAAGAGTCTGA-GAAAGGCGGACTAGCATGTTCCATCTGCAACTCACCTGTAATAATAAGGATGTTTCTTCCCATCACTGCCTTCAGAGGTGACGGCGCTGACAATGTCCTCGGTGTCTGTACTCACCAGCTTCACGGAATGGACGGTCAAGTGCTGGTTCAGATTTGCACGGCACTTAGCAGCATAGGGGCACAAGTGGCATTTGTATTTTCTTTCCTCTGGGGGAGAAGGAACAGGAAA chr4 + 94230402 32344931 32344930 32345208 32344931 32344930 32345208 278 AGAAGAGAGGTCCTGTAACACA-GCCTAT-GCAGGCAGATAAGA-----CAAATTCCAGTGTCTGGTGCACAGCTCTCTTGCTTAGGTC--------CTCACCTGTAATAGTAAGGGTGCTTCTTTCCATCACTGCCTTCGGAAGTGACAGCGCTGACAATGTCCTCAGTGTCTGTACTCACCAGCTTCACAGAATGAACGGTCAGGTGCTGGTTCAGATTAGCACGGCACTTAGCAGCGTAGGGGCACAAGTGGCATTTGTATTTTCTCTCTTCTGAG---AAAGAAACAGAAAA ....:..:..:.::..:.:::.-...:.:-....:...:..:..-----::..x..x..x.....:-.x.x:..xxx..x..x.:xx:.--------.............:.....:..:.....:..............:..:.....:.................:.......................:.....:.......:...............x.................:.............................:..:....:.---:...:.....:... 22M1D6M1D14M5D17M1I22M8D182M3D14M 226/277 81.6% 278/94230402 0.0% 19/277 6.9% 113430757 76783798 +3382 chr4 + 190214555 145778481 145778480 145778554 74 GTGCACCTGTAGTCCCAGCTACTCAGAAAGCTGAGATGGAAGGATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:::..:......x:xx:x.:.x...........:.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 69745277 NA +11304 chr4 + 190214555 145779369 145779368 145779522 154 CTCACCTGTGTGCAGCGAGAGGTGTCGGGACAATGTCTGCTGTCGGCCAAACACTTTCCCACACACGTCACAGGGAAAAAGCTGGTCATTGAATTTCCAGGATGGTAATCCATTTCCTGCCTCTAGGACTATCTTTTCTGTTTCTGGGTCAAAA chr4 + 94230402 32346724 32346723 32346877 32346724 32346723 32346877 154 CTTACCTGTGTGCAGCGAGAGATGTCGCGACAAAGTCTGCTGTCGACCAAACACTTTTCCACACACTTCACAGGGAAAGAGCTGGTCATTAAATTTCCACGATGGCAATCCGTTTCCTGCTTCCAACCCTAGCTTTTCTGTTTCTATGCCAAAA ..:..................:.....x.....x...........:...........:........x...........:...........:........x.....:.....:........:..:.:xx...x.............:x.:..... 154M 133/154 86.4% 154/94230402 0.0% 0/154 0.0% 113432645 76781910 +3012 chr4 + 190214555 145779926 145779925 145779987 62 TACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGAGTAGATCACTTGAGCTCAGAAGTT chr4 + 94230402 76033205 76033204 76033266 76033205 76033204 76033266 62 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT .:...x....:.:.....xx:...::........x.xx..::.x.......:.:......:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 69746721 NA +10519 chr4 + 190214555 145781694 145781693 145781945 252 CTGTCCTTGAGTCCACG-CAGTGGGCAT-TTCAGCTGTGCATGAATTTCA---GTATATCAGTAGCTCCTTTTAAGTGTATAATCAAAACAGTGCTTCAAAGAACAATAACGGTAATAATTATAAGGAGAGGTCAAGAGGGTACAGGGTCTGTTAATACATTCACAACAAGAATGAATGAATTGGGTCAAATATCAAATAAGTAGATGCAATTAAAAATAGATAAGCACCTTAATAATTCCTTCAAGTATCAATCAT chr4 + 94230402 32348649 32348648 32348905 32348649 32348648 32348905 257 CTGTCCTCGAGTTCAAAACAGTGGAAAAATGTGACTCTGTACTAATGTTACAGTTATTTTAGCAGAGCTTCTTGAGTACATAATCAAAACAGTGCTTCAAAAGCGGAATATGGTAATAATTATAATAGAAGGTCACAAGGGTGCAGGTTGCTTTAATATGCTCACAACAAAAATGAATTAATTGGGACACATACCAAACAAGTCGGCACAATTAAACGTAAATATGTCTCTTAACAATTCATTTCAGCATTAGTCAT .......:....:..x:-......:x.x-.x:::..x..:.:x...x.:.---x...x.:..:..xx.:.:..:...::......................::xx:.xx.:..............x:::......x:.....:....x.x:x......:::.........:.......x.......x..x...:....:....x.:::........x:..:...x.:x:.....:.....x..:x..:..:.:.... 17M1I10M1I21M3I204M 178/252 70.6% 257/94230402 0.0% 5/252 2.0% 113433045 76781510 +3322 chr4 + 190214555 145807774 145807773 145807821 48 TAAAAAAAAAAAACAAAAAACAAAAACAAAAAAAAAACAAAAAACAAA chr4 + 94230402 33844419 33844418 33844466 33844419 33844418 33844466 48 TAAAAAAAAAAAGCAAAAAACAACAACAAAAAAACAACAATATATAAA ............:..........x..........x.....x.x.:... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 111963355 78251200 +7094 chr4 + 190214555 145823377 145823376 145823559 183 CTTAAGCAATCAACAGTAGAAGCAAAGCCAACAATGTTTCCATACCTGGAGCTGATATTCTTCCGTGCAGCACGGAGTCACTGGGCAGCAGTTCTTTTGAATTGGAGGTGAATGGTGATTGTCTAAATGTGTCTTCTGAAAAGAAAGGGCTGGGGTGGGGGAGGGGGAGTGAAGTTTAGTAAA chr4 + 94230402 32366676 32366675 32366855 32366676 32366675 32366855 180 CTGAAAAAAACAACCTAGGAACTAATGAAAAAAGAGGTGTCTGACCTGGTGCAGATGTCCTTCCATGAAGAGCAGTTTCATTAGGCAGGAGATCTTTTGAGTTGGAAGTGAACGGTGATTGTCTAAAGGTGTCCTCAGAAAAGTAAGGGCT---GTGGGGGAAATAAGATAACTTTTTGTAAA ..x..:x..x....xxx:...x:..x.xx..x.:x.x.x:.xx......x..x...:.:.....:..x..x:.:.xx...:.:.....x..x........:.....:.....:..............x.....:..x......x.......---........::x::::.:.xx...x..... 151M3D29M 126/180 70.0% 180/94230402 0.0% 3/180 1.7% 113456701 76757854 +3850 chr4 + 190214555 145832129 145832128 145832207 79 GTGGTGCATGCCTGTAGTCCCAGCTACATGAGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--......:........x...:........x:xx.x.:.x.......:.....:..x.xx:.....:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 69798928 NA +4672 chr4 + 190214555 145845950 145845949 145846026 77 GCCTACCTGGTCGTGGTCCGGATGGTGTTTTCTTTTGTATGATTGTGCTCTTTGCTCACTTTTTCTGTAAGGAGAAA chr4 + 94230402 32371039 32371038 32371113 32371039 32371038 32371113 75 GCTTACCTGACTGTAGTTCTGATGGTGTTATCTTTATTGTGATTGTGCTCTTTGCTCACCTTTTCTGT--GGAGGAA ..:......:::..:..:.x.........x.....xx.:....................:........--....:.. 68M2D7M 62/75 82.7% 75/94230402 0.0% 2/75 2.7% 113474911 76739644 +3128 chr4 + 190214555 145846480 145846479 145846526 47 ACAAACAAACAAACAAAAAAACACAACAACAACAACAAAAAACAACC chr4 + 94230402 18496614 18496613 18496660 18496614 18496613 18496660 47 ACAAAAAAAAAACCAAAAAAACCAAACAACAACAACAAAAAAAAACC .....x...x..x.........xx..................x.... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 127349866 62864689 +3211 chr4 + 190214555 145846481 145846480 145846527 47 CAAACAAACAAACAAAAAAACACAACAACAACAACAAAAAACAACCA chr4 + 94230402 76741965 76741964 76742011 76741965 76741964 76742011 47 CAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACA ...................xx.............x....:x...x.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 69104516 NA +3059 chr4 + 190214555 145846677 145846676 145846746 70 CATGATGGCGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:::...:..::.--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 69813480 NA +3089 chr4 + 190214555 145846815 145846814 145846861 47 TCAAACAAACAAACAAACAAAAACACAACAACAACAACAAAAAACAA chr4 + 94230402 49372039 49372038 49372085 49372039 49372038 49372085 47 TCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAA .....x...........x..x.........:..:......x...x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 96474776 93739779 +7004 chr4 + 190214555 145847580 145847579 145847769 190 AGGTCTACATCTATCAGCTGTCAGAAATTATTTAATGAGCTTTCAAGAACACAAAAGTTGAACTCTGGCCTTCCCAATGCAGTTCAAATGTGAGGACCCTACACTGACGGTCACAGCTGTCAATGGCTTCTTTTAATATCTAGAAAAAACCTGGCCAACTGTATAAGAGTTTCAGATTTAAACAGCAGGG chr4 + 94230402 32371481 32371480 32371660 32371481 32371480 32371660 180 AAGCCTCAATCAACCAGTTGTCACTAATCATTTAATGAGCCTTCAAAAATACAAGAGTTGAACTCTGGCATTTCCAATTCAGTTCAAACATTATGAACCTGCTCAGACTGTCACAGTGCTCTAAAACATATGTTAAC-TATGGAGAACATTTGGC---------AAGACTTTTGTATTTCACTTGCAAGG .:.:..xx...x.:...:.....xx...:...........:.....:..:....:..............x..:.....x.........::.x.x..x...:.x.x...x.......:xx..x.x::.x.x.x....:-.x.:..:..x.::....---------....x...::x....x.x:x...:.. 137M1D17M9D26M 128/180 71.1% 180/94230402 0.0% 10/180 5.6% 113476099 76738456 +14868 chr4 + 190214555 145849319 145849318 145849610 292 TACCTGACAGTTGAAAGAGGAGCTCGGAAGCCATTTTCACAGAGATATCCTGACTGAAGAGGTTTCTCTCTGGGGGTACTCTGCCCTCTGGCATCTTCTGTAAGGGTTCGGTTTTCTCTCGCCCGATTAAAGTGCTGTAGCCAACATT---------CCGGCTGGGTGATATCGAGACATGGGAGTCCTGGATGTCAACCTCCATGGGTTCCTCTTTAATCTTCACCATCTGTGTTTCCTTGTAGCTTTCCGCTGCAAGTAGGTGAATGAAGAGAAACAAAAA---------CACCACCATTTCTTAATT chr4 + 94230402 32371786 32371785 32372093 32371786 32371785 32372093 308 TACCTGATAACTGGAAGAGCAGCTCAGATGCCATCTTCACTGATATATCCTGGCTGAACAGATTTCGTTCTGGGAGCACACGACCTTCTGGTGCCTTCTGGATGTGTTCACTAATGTCTCGCCCTAATAAAGTGCTGTAGCCAACATTTTGGCTGGGTTGGCTGGGTGACACCGAAGTCTGAGAATCATGAATGTCAACTTCCATTGGTTCTTCTTTTATCTTTACGGTCTGGGTTTCCTTGTAACTCTCAGCTGCAA--AGATGTATTGAAAAAAAAAAAAAGAAAAAAGCCACCACAATTACTTAATT .......:.::..:.....x.....:..x.....:.....x..x........:.....x..:....x:......:.:..x.x:..:.....:::......x.x.x....:x.xx.x........x.x.....................---------::..........:.:...:::x..:..:..x..:........:.....x.....:.....x.....:..x:....x...........:..:..x.......--..:..x..x:.:.:...x.....---------......x...x....... 148M9I101M2D23M9I18M 224/290 77.2% 308/94230402 0.0% 20/290 6.9% 113477533 76737022 +5444 chr4 + 190214555 145852267 145852266 145852439 173 TGGAATAAAAAATCACCTGGCTATTTGCACCACT--AAATTTAATGAAATTAGTTTT------------TAAAAGCTTCCTGGGATCACATCAAGTATGATTTACATGAAGTGCTTTCTGCTCTTTCTTATGACAACCCTTGCCCTTTCAAGAATGCACAAAACACTGATCACTGATAAAAAGCCTT chr4 + 94230402 32373859 32373858 32374039 32373859 32373858 32374039 181 TGGAGGAAAAAGTGGCTTTGCTACTTGCAGATCttaaaataaaaaaaaataaaaatCAAAGGCAGGAGATAAAAGCTACTTGGACATGCTCCAGGAGCGATTTACATGAAGTGCTTTCTGTCTTCTCTTATGACATCTCTTGACCTTTCAAA-----ACAACATAC-AAACACTGAGAAAAATCTTT ....:x.....:.x:.:.x....:.....xxx..--....xx..x:....x.:xx.:------------........x.:...:xx::.x:..:.x::......................:::.:..........x.:....x........:-----....x.:..-:.x......x.....x.:.. 34M2I21M12I83M5D9M1D20M 119/167 71.3% 181/94230402 0.0% 20/167 12.0% 113478408 76736147 +6822 chr4 + 190214555 145857125 145857124 145857436 312 ATTTAGGAAGGAAAAT---TAACAAATGTCTTTAGAATTAGCTATGCAAATTAGAATTCATAATTAAGTAGACAGAGGTGAGCAGGGGATCAACTTAGAGTCAATTTTAGAAAAACACC---TGAGAAGCACCAGGTATTCTATTTTGCTAACTTTTTGAATTTGCAAAGAACAAACATGTCTTAAAAATGCTGAGCT-CAAACTCTACAGGTAAAAAAGAGTTAGTGAGACTTGGAATTTCTTTCTGGGGT---ACATGAAACATATCATTTTCTACAAGATCAAAGCGCTTGTTGCTTTACTCTTACGTAGATTTTTAAA chr4 + 94230402 32378645 32378644 32378962 32378645 32378644 32378962 318 ACTTAGAAAAGAAAGTCTTTCCCATATGTCTCATAAATTGGACTCATGTACTAGTTCTTGCAATCAAGCAGACAAGGGTAACTAGTGGGTCAACTTGTACTGACTTC---AAAAGCTTTCAGTATGAAGAATCAGGCATTTTGTTATGCTAATTGTTCTGATTTGCTAGAAATAAACATGCCCTAAAACAGCTTAAATAAAAACCTTAGAGGCAGGGAACAGTTGGTGAGCCCTGAAGGTTCTGCTACAGACACAACAAGTAACATCTGACGTTCCCTAGGGT-GCTGTGCTTGATGCTTTATTTTGGTACTATTTTTTCAA .:....:..:....:.---.xx..x......:xx:....:.x:x::::x.:...xx:.:::...:...:.....::...:.x:..x..:.......:x.x.x.x..:---....:.x::---.:x....x.:....:...:.:..x......:.x..:x:......x.::..:.......:.:.....xx...x.:x.-x....::..x...:.:::..x....:.....x.:..:.:x....x::xx:.::---...x.x.....x.x.:x...:x:.:.:.-:xx.:.....x.......:.:.x::::x:x.....x.. 16M3I88M3D9M3I76M1I53M3I28M1D38M 188/308 61.0% 318/94230402 0.0% 14/308 4.5% 113478480 76736075 +3475 chr4 + 190214555 145858506 145858505 145858584 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATAGCTTGAGGCCAGGAGTTTGTGGCTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:...........::........x:xx.x.:.xx:.....:x....:..:..xx........ 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 69825305 NA +15321 chr4 + 190214555 145870213 145870212 145870495 283 AGAATGTGAATATTTTAGAATAAATCAAGTACCTGAGAGTTTCATGAGAAGTTCAGAGGCTGCTTTGACTGACACATCCCGCCTTAGCACACTTCCCTTCCCTTCCTGGGGCTTTAGTGCGTCCTCAGAGACGCCTGGGGCTGACACTTCAGATTCCGGGCTGAACACATAGCTGGACCGAGGCAAAGTCGTGCTTAGGGACTCCCCTTCCTTAGGCTCCTCTTTCACTTTAAAATTAAGATTCATGGGCTCCTTCTGATTTGCAGCTGTCAAAAGAAAAAAA chr4 + 94230402 32384647 32384646 32384924 32384647 32384646 32384924 278 AGAAGTTGAATATTATTAAATAC-----GTACCTGAGAGCTTCATGAGGAGCTCAGACGCTGCCTTGACTGATATGTCCTGCCTCATCATATTTGCCTGTGCTTCCTGTGGCTTGAGTTTCTCCTTAGGTGCACTGGGAGCTGAGGCTTCGGATTCCTGGTTGAACACATAGCTGGACTGAGGCAAGGTTGAACTTGCAGCTTCTTCATCCTTAGGCTCATCTTTCACTTTAAACTTTGGAGTCAAGGGCTCTTTTTGATTTGCAGCTGTCAGAAGAAGGAAA ....xx........x.x:....x-----...........:........:..:.....x.....:........:.::...:....:.x..:.:..x...x:x.......x.....x...x:x....:..:x:.:.:x..:.....x:....:......x..:.................:.......:..:.x:...:x:.x:..::.x...........x..............x..x:..x...x......:..:................:.....::... 23M5D255M 213/278 76.6% 278/94230402 0.0% 5/278 1.8% 113485566 76728989 +3549 chr4 + 190214555 145872734 145872733 145872835 102 ACGTGGTGGCATGCACCTGTAATCCCAGCTACTCGGGAGACTGAGGTAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033196 76033195 76033289 76033196 76033195 76033289 94 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:::....--.....x....:.:.........:.::..:.....x:xx.x...x.:...........:..x:xx:..:...:.------..x..x...... 9M2D73M6D12M 67/94 71.3% 94/94230402 0.0% 8/94 8.5% 69839538 NA +3584 chr4 + 190214555 145878662 145878661 145878750 89 AGAGAGAGAAAGGAAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGAGA-------GAGAGGAAG--GGAGGAAGGGAGAGAGAG--GAAGGGAGGAAGGGC chr4 + 94230402 75729449 75729448 75729548 75729449 75729448 75729548 100 AGAGAGACAAAACAAGGAAGGGGGAGAAAAGAGGGGAGGGGGGGAGAATTAAATGGGAGCAAGCTAAAGGCAGGGGGACAGAATCAAAAGGAGAATGTGC .......x...:x.........:....:.:..:......::......-------.:...x...--::...x....:..x...:--:..:....:.x.x.. 47M7I9M2I18M2I15M 67/89 75.3% 100/94230402 0.0% 11/89 12.4% 70149213 NA +3089 chr4 + 190214555 145880095 145880094 145880164 70 CATGGTGGCAGGTACCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--.:..x.x....:...........::........x.xx.x...xx:.........:.:.. 9M2D59M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 69846898 NA +16527 chr4 + 190214555 145883045 145883044 145883518 474 AGAGGGTAAGTAAAATTAAAAAAAAAAAAAAAATCGCTCTAGAAAATGTATTCCTTTCCTTTTAACTTATCTTCTCCTCTCCTGAGCTGCATTGCCA---CAGTCACCAAGTTTACATTTACATCCAAATATGCACACACAAAAAAATTAAGGATGCATCTCACTCCCC-AGTGACTTTATAACAGGTTGCTAGGTAACAGTGCATACAAGTCAGGTTTCAGGACCTCCAGTAAGCCACCATAAAATAGCCACATGGGCCTTTTGCATAAATAGTGTGTGCATTTGTTATCTGTTTTCTTATGCCAAT-TATCAGTCAGTAAATATTC---TGACTACCAAACCATAAACAACTCCCCATCAATAGCTAACTGAAAACACAGATCACAATATAAGGCTTTGATGCGCAATTCTTCCCCCCAACCTATCAACTGGCTTCTCCCCTCGTGTCTGCTGCTTGCAGTGCTGGCTCTAAGCAGCCTT chr4 + 94230402 32394791 32394790 32395244 32394791 32394790 32395244 454 AAAGCATGAGCTAAATGTATAAAACAATATAAATCTCAGGAGAAAAGAAATTCTTTTCCTTTTAGCAT------TGCTCTCCT----TGCGTAGTAAACTTGGTGACTGGCAGAACATTTCCAACCAAATATGCACACATACAAAA-TTACAGATACATCTCACTCCCCCAGTGACTTTATAACATGTTGCTAGGTAACAGTGCATACAAGTCAGGTTTCAAGACCTTTAGTAAGTCACCATAAAATAGCGGCATAGGTCTTTTGCATGAATA--ATGTACATTTA-TATCCTTTTTCTGATGCCAATAGATCAGACACTGAAAACATGAATGTCTGCCAAACTGTAAACAATTCCCCATCAACTGCTACATGAAAA-ACAG--CACATCAAAA-----TGTTGTATGTTTTTT-----CAGCATTCAAGCTTTCCCCTCCTCTCCAGCTTTCTGCTCTCACTCCT-GCTACATGCAGCCTT .:..x:.:..:x....xx.x....x..x.x.....x.xxx......x:x....:..........:.x.------.x.......----...:.x.:x.---::..x..:::xxxx......x..x...............:.x....-...x:...:.............-...............x...................................:.....::......:..............x:...:..:.........:....--:...:.....:-....:x......x........-x.....x..x.:..x.:x:---..x..:......::.......:..........:x....xx......-....--....x:.x..-----..x..::::x..:..-----..:.x.x:x.:..xx.::....:...xx.::.x.....:x..x.x..-...x:.x........ 68M6D9M4D10M3I46M1D22M1I103M2D11M1D21M1I19M3I46M1D4M2D10M5D15M5D47M1D15M 336/446 75.3% 454/94230402 0.0% 36/446 8.1% 113488254 76726301 +5942 chr4 + 190214555 145884382 145884381 145884581 200 TTTAGTGAAATGCGACTCACATTCCATTTAAAGGAAGGTGGTGACCAATTATTCTCCATTTAAAAGGGTATTGTCAATCTCCAAAGAGCTGACATGGCATTTGGAAATCATCGTGGGGACTTCCATCTTCACTGAAATACAGAACCAATTCTCCACCGACCTTTCCCC--ACCCCCTACATCTCCTTTAAAATTTAAAATCA chr4 + 94230402 32395796 32395795 32395978 32395796 32395795 32395978 183 tttACTAGAATACAACTTACATTCAATTTAAAGGAAAAAGGTGACCATTTATTCTCTACTGTAAAGGGTATCTTCTATCTCCAAAG-------------TCTAGAACTTGCAACATGGACTGACATCTCC-TTGTGAAACAGAA--GTTTCTTCAGTGATCTTTTTCCTGATTTCTT---TCTCTTTAAAAATTAAAGGCCA ....x.::...:.:...:......x...........::x........x........:.:.xx.........:x..x..........-------------.:.:...x.:::x:::x.....xx.....:.-:..x:.x......--:x....:..x:..:....::..--.:::.:.---....:..x......x..:::.. 86M13D31M1D13M2D22M2I7M3D22M 127/181 70.2% 183/94230402 0.0% 21/181 11.6% 113488586 76725969 +25834 chr4 + 190214555 145885666 145885665 145886161 496 CTATTCAAGTACCTGACAGCTTCATGAGAAAATCAGACGCCATCTTAACAGAGATGTCCTGGCTGAACAATGCTGACGCACTGTTGGCCACATACTCGGAGGGGTCTTTCAGCTTTGTGTGGTTGGCGGGCCTGTCGGCAGCATTCAAAGTAAAGG----AGGTGGGCAGGCCGTTATCTTCCTTGGGTTCCTCCTTCACCAGCAAAGGCGAGACGCCAGCCCCTCCCTGGCTAGTCCTCTCTGGAGTGTTAGACGTCATCATGGTCCCCACTAGCTCTGTCCCTCCTCCTTCCCTTTGCTGCCCCAGGCAGGCACTGTCACTGAGGTGGGGAGATCCCTTGACATCTGGGTCTGGGATCTCCTCCTTCACCTTGGCTTCTGTCCTCAGGAAGTGCTGATGGCAACGCATGTGGAGTTTCAGGCTGAAGTGGCGTGAGGAAGTAAAAGGGCACAGCTGGCACTGAAAGGTCTCTCCCCGATCCTGGTGCTGATGAACCTG chr4 + 94230402 32396790 32396789 32397285 32396790 32396789 32397285 496 CTGCTCAATTACCTGACAGCTTCATAAGAAAATCTGATGCCATCTTGACAGAGATGTCTTGGCTGAATAGTGCTGATGCTGTACTGGCCACAAAGTCAGAG---TCTTTCAGCTTTGTGTTGTTGGGGGCTCTGTCAACAGTGCTAAGAGCAAAAGGTGCAGCTGAG-ATGCCATTGTCATCTTTGGGCTCTTCTTTCACTAGTAAAGGTGGAATACCTCCACTAGCCTGCCCAGCCACATCAGATGTTTTAGATACAGATGCTGATCCCATAAGGTCAGGTCCAACTCCTTCCCTCTGTGGTCCCGGGCAGGAGTCACTATTTAGCTGTGGTGACCCCTTCACCTCAGTTTCTGGTATTTCCTCCTTCACTTTGGATTCTGTCCTGAGGAAATGCTGATGGCAACGCATATGGAGTTTCAGGCTGAAGTGGCGGGAGGAGGTAAAAGGGCATAGCTGGCATTGAAAGGTCTCACCCCTGTCCTGGTGCTGATGAACCTG ..::....x................:........x..:........:...........:........:.:......:..xx.::........x.x..:...---................x.....x..x:.....::...:::.x.:..:...:.----..x..:.-.x...:..:..x..:.....:..:..:.....:..:.....:.::.::..xx.x.:xx....x.:..:.x:x..x.:x..x.....:::x:x:::x.x:....:x..x..x.x:..xx..........:..:x.:...:......x::::::.:.x..x..x..x..:.....x..x..x.xx.....x..:...........:....x.........x.....:.................:.......................x.....:...........:........:...........x....x:.................... 101M3D52M4I7M1D332M 371/492 75.4% 496/94230402 0.0% 8/492 1.6% 113488876 76725679 +3370 chr4 + 190214555 145885675 145885674 145885734 60 TACCTGACAGCTTCATGAGAAAATCAGACGCCATCTTAACAGAGATGTCCTGGCTGAACA chr4 + 94230402 32371786 32371785 32371845 32371786 32371785 32371845 60 TACCTGATAACTGGAAGAGCAGCTCAGATGCCATCTTCACTGATATATCCTGGCTGAACA .......:.:..xx.x...x.:x.....:........x..x..x..:............. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 113513889 76700666 +15963 chr4 + 190214555 145892238 145892237 145892444 207 CTTACCTTCATGTGGGATTTGAGATTGTCCTTGCGAGCACACCGGAATGGACAGAGCGGACACTGATGACTTTTTAAACCTGTGTGAATCACCATGTGCCGCTTCCAGTAACTCTTCCTTTTAATAACCAAACCACATATTGGACACTGGAAAGGCTTTCCACTTTCCTCTTCTGAGGCTTGGAAGAAG------GAGAAAGAAAGGACCATT chr4 + 94230402 32407651 32407650 32407863 32407651 32407650 32407863 213 CTTACCTTCATGTGTGATTTGAGATTGTCCTTACGCGCACAGCGAAATGGACAGAGCGGACACTGATGACTTTTCAAACCTGTATGAATCACCATGTGCCGTTTCCAGTAACTCTTCCTCTTGATAACCAAACCACAGATTGGACACTGGAAAGGTTTTCCTCCTTCTTCTTCTGAGGCTTAGCAGAAGGGGGAAGAGAAAGAGAGGATCCTT ..............x.................:..x.....x..:.............................:........:.................:.................:..:..............x.................:.....x.:...:.............:.x.....------........:....:.x.. 189M6I18M 187/207 90.3% 213/94230402 0.0% 6/207 2.9% 113484587 76729968 +73952 chr4 + 190214555 145901575 145901574 145903251 1677 CAATCTTTTTGAGTTCTTATAGGACAAGAAATTGTAGGAGAATAGGATACGTGAAAAGGGCTTAAATTCCACAAAAAGT--AATAAAAA-TGCTAACATAAAAGTATATGGTGTGATAAATTAGGGCAGAGTAGTTCCTGATTGTACAAAAGTCCATTTGTGATGGAGGCAGCAGGAGTGTGGGCTCTCCCTTGTCCACTATTTCAAAAGCAGTGGGTTTTTTTCCCCTTATGTTCAGTGATGCCATGCACTCCATGACAAAGATGCTTTGATCTTCTCCCATTAAATATATCTTGTATGGACCTAGCCTGAACTTAGTAAGAAAAAAAAAT-CATTTGTATGAAA------GGGAGGGAATGCTGTAT--GTCTCTAAGATTATTCATTACCTTTCAAAAGTGAAGCTATTTGTGA------AGTCTTTGTGTAATACGTACATGAAAGACTACTATGCTGCTTACTTAAAGTATTT--TTGTTGTGCTCTTGCTTTTTTATTCCTGCCTCAGATCAGATGGGGAACCCAACTGAA--AAAAGCAATGAATAAGACATCGCA---GTTTATAGTCTAAAGGACTTACACGAT--GATTGAAAGAAAAGATGCCATACCTGAATTGGAGGGTTTAGAAACTCTTCCCTTAGGAACTGGGAGTAATAATAATTCCAGGGATTGTGGTGGTGGTGGTGGAGGTGGTGGAGGTGGCGGTGGAGGTGGCGGAGTGACTTTTTCTGGTTTCTTCTCTGAAGGCGGGGGCGGTAGAGGGTCCTCAGGCAGCAGCGATGATTTCT---CAGCCAGAAGACTGCCCGCAGCCCTTGCGGCCACCTCCTTCAGAAGGGCCGCTGAGGAGGTCATAGAAGCCAGGGAAAGGAAGGAGCTGGCCGGTGGAGGGTGCTCCTGACCAGGAGTCAAACTTCTTTCACTGACCTTCTTGGACAAAGCGGCCAAGGTAGAACTGGCAGACTGGGAGCTAAAAGGGGAGGAAAAGGACTCAAATCGCATGGTCTCCTCAGTCCTGGTGAGAGATTTGTCCTGCAGAACGGCATTGGCTGCAGCTTTCAGTTTTAGGATGGCTGAATCCGGAGACAAGCTGCAGGTGGTGGTTGAGTTTGGCAACCACTTACCTTGATTCCATATAAAACGGTTACTTGGAGTGTATTGGTCATTCTGTTCCTGCTTCTCGGCCAACTTCCTGGCCAGAACACTGAGCTGCTGGGCGTGGTGGGAAGGCGGGGAAAAGGAGAGGTTCGAGCCAACGTTTACGGGGGACTCCACTCTGCCATTAGCCGTGGCTGCAGCATCGAGTTTGAGGGAACCAGCCTCCAGCAGCCGCCTCAAATTGCTGCTCAGGGGCTTGTTGGAGCCTGGG---TCATCGTCACACAAAGAAGACACTCCCGGGGAAAGGTGATCTTGACACTGCAGTGAGTCTCGCAGGACCTCACTGTCCAGTGCCACCAGCTCCAACGTGTGGCTGCTGGGAGTCGTGCTTCCCAAGGAGGTGTCCGGGGACGTGGACTGCTCCTGGATCCGGTCCTCCAGAGACAACTTATAGTTCTCCTGGACTTCCCCATAGGATGCTTCTGACGGAGTCTCTGAAGAGTTTCCATACCAGTGTTCTCCTTCACTGAGCTCTCCCTCCGCCTCTTCCTGCCTACTAACATCTGGGGAGAATTAAGAAGATCAGGTTTACTCCCAAA chr4 + 94230402 32412486 32412485 32414101 32412486 32412485 32414101 1616 CACTTTTTTTTTTTTTTTA-ATGACAAAGCTTTGTAAAAGACT-GAACATGTGAGATTTGTTCAGGCTGCAAAAAAAATTTAATGAAAAGTGGCAACATAATAATATAC--TCTGGTAAATTAGGACAGGGTAGTAAGCGATTATACAAAAGTCCATTTGTGACAGAGACAGCAGGAGGGAGAATTCTTCCTTGTCCAGTATTTCAAAAGCACTAGTTTTGTAT------ATGCTCACTGATACTGTGAGCTCCCTAACAGGGATTCTTTGATCTTCTCC-ATTAAATAT---TTTTGTGGATTTATTTTGAACATGGTGAGGGGGGGAAATGCCATTGTATGAAATTAAAAAAAAAATAATACTGAACTGGACCCTTATATCTTTCA---------AAGAATGGAAACATCTGTGACAGTTTGGTCTTCAACTGGTATTT---TAAAAAGCTCTTCTATTGTTTCCCTACAGTACCTAATTATTGTTCTC-----------------------ATAATACGTGGAATCGAAACAAATCCAGACCCATTGAAGAGATGTTATATAAGCCTATAGAAAAACAAATGCATTCTATTTAGTTGCTCAAACCATATCCATACCTGTACTGGTGGGTTTGGATGTTCTTCCCTTAGGGACTGGCAGTAACAATAATTCCAAAGACTGTGGTGG---------------------------------------AGTTGCTTTCTCTTGCTTCATCTCTGAAAGCTG------CAGGGGATCCTCAGCAACCAGTGATTTCTTCTTCTCTGCCAACAGGGTGCCTGCAGCCCTTGCAGCAACCTCCTTGAGCAGGGCAGCTGAAGAGGTCATAGAAGCCAGAGAAAGGAAAGAACTAGCCGGAGGCGGGTGCTCCTGCCCAGGAGTCATGCTTCTTTCACTCACTTTTTTTGATAAAGCTGCTAATGTGGAGCTGGCAGACTGAGAGCTAAAAGGTGAGGAAAAGGATTCAAACCTTATATTATCTTCAGTCCTTGAAAGAGATCTGTCCTGCAGAACAGCATTGGCTGCGGCTTTCAGTTTCAGGATAGCTGAATCGGGGGACAAACCACAGGCGGTGGTTGAGTTTGGCAACCACTTACCTTGATTCCATATAAAGTGACTACTTGCATTGTATTGGTCACTTTGTTCCTGTTTCTCAGCTAGCTTTCTGGCAAGCACGCTGAGCTGCTGGGCATGATGAGCAGGTGGAGAGAAGGAGAGATTTGAGCCAAGATTTACAGGGGACTCAACTCTGCCATTGACTGTAACAGCAGCATCCAGCTTGAGGGATCCAGCCTCCAACAGCCGCCTCAGGTTGCTACTCAGTGGCTTATTTGAGCCAGGAGGTTCTTCTTCACACAGAGATGATGCATCAGGAGAAAGGTGCTCTTTGCTCTGTAATGTGTCTCTTAGCGCTTCATTTTCAATGGTTCCCAACTCCGCTGTGTTGCTGCTAGGAGTTGCACTTCCCAAAGAAGTATCTGGGGAAGTGGACTGCTCTTGGATTCTGTCTTCAAGAGACAACTTAAAGTTCTCCTGGACTTCTCCATACGATGCTTCTGAAGGAGTCTCTGAAGAATTTCCAAACCAGCGTTCTTCTTCACTGAGTTCACCTTCCACTTCTTCCTGTCTGGTACCATCTGTATGGAACCAAGAATAACAGTATTATTTCCAAA ..x.:.....xxx..:...-.x.....::xx.....::...x.-.:.:.:....:.xxx.:.:.:::.x..x.....:.--...:....-..x:.......x.:....:--.x..:.........:...:.....xxx:....:...................::...:.........x.x.:::...:.........x.............x.:.x...x.x.------...:...x....:.::..x:....x.:...::...x..............-.........---..x.:....::..x::.....x.:..:..::::::....-.xx..........------:::.::x...:...x.:--.x.:..x.x..:x....---------..:.:..:.:x:..:.....------:.....::xx.::..:x.---.:...::..x:.x.::..:..x.:..x....::.--..:....x...-----------------------..x.x.:.x....:.x..x::..--x.:.x.x..x:.x:...::.:::.---.::.....xxx..x::.:x:.:x.x..--::...xxx:..xx:xxx.........x.:...x......:..x::............:.....x.....:..........::..:........---------------------------------------...x:....:...x.:...x........:..x.------:..:..:.......xx.x...:...xx:....---.x....:x..:x....:...........:..x........x..x.....x.....:.................:........:..:..:.....x..x...........x..........x:...........x..:..:..x..:.....x..:..x..:..:...........:...........x...........:.....:.x:..:x.x..:........x.x:......:.............:...........:...........:.....:........x..:.....:.::....:..........................................::.::......x.x...........:.:........:.....:..:.:...:.....x..x..:..............:..:..:.x...:..:..:........:..:.......x:.....:........x...........::.:..::.x........x..:........x..........:...........::.....:.....x.....:..x.....x..:---..x..x.......:...x..::.x:.x..:........x....x:.x...:.:..x.....x:..x:.:...:.x..x.xx.::x...:....:x:....x......:.....:.::........:..:..:..:.....x...........:.....:.x...:..x............x................:.....x...........x..............:......x.....:.....:..........:..x..:...:.:........:..:x..x......x:x:...::.....x.x...xx...:.:..... 19M1D23M1D35M2I8M1I19M2D113M6D50M1D9M3D39M1I13M6I17M2I17M9D20M6I18M3D34M2I11M23D23M2I24M3I27M2I93M39D33M6D32M3I578M3I328M 1188/1583 75.0% 1616/94230402 0.0% 127/1583 8.0% 113489089 76725466 +10583 chr4 + 190214555 145913590 145913589 145913936 347 ACTCACCAAAAGGCCAATCTAAAGACCAAAATGGGACTGGTTAGTCCACGGATTGATTACTTGCTCCCTTACCCTTTCAT--------GCACCTCT---TATTACAAAAGGCACATAGAATCTGTCCCCTCAAGCAATCAGAAGTAAATTTACCATGGCTACCACATCGTTATCAG-----------AAAAATTGTCTGCTAAGGCTGATAAATCGGTTGATTATCTGCTTCCTTGACTTTTATTTCTTTTTGTATAAATGTTTTCATTTTAAC--ATTACCAATACTTCTTAGAAGATCAGTAATAAATTACCA-----AACTACTGAAATCACCAGGAAGTCTTT-----------ACTAGGTCAAAGAA--CCTAAACAAAAATGA chr4 + 94230402 32428485 32428484 32428847 32428485 32428484 32428847 363 ATTGACCAAAAGGCTAATCGAGGCACCAAAGC------------CTCACTGGCTGATTACCTGCTCCTTCACCCATTCATTTTAAGAGGTGCCCTCATGTGTTGTACACACCATATAGAATCAGTACCCTTAAGCAATTCAGAGTAAATTTACCATAGCTACCACTATGTTGTAAGGAAAAGGAAAAAAAAAAAATCTGCTAAGGTTGATAAATCAGTGAATTATCTGCTTCCTTGAC----------TCTTGTGTAGATTTT----TTTTAACTTAGAACCCGCACATATGAGAAGATGATCTGTATATTGCCAAAACCAACTGTTTAAATTAGCAGGAAATCCTTAATTACTACAAATTAGATTAAAACAGTCTTAATAAAAAATGA .:.x..........:....x.::x......::------------::...x.::.......:......:.:....x.....--------.::..:::---.:..::.x.x:x..:........x..x....:.......:x::..............:........xx:...:.x..-----------.....xx:..........:.........:..x:..................----------.:....:..:..x..----.......--.xx...x::..x.x.x.......x.x:x:..x...:...-----....::.x....:.x......:..:..-----------.:...:.:...:x.--.:...xx........ 32M12D36M8I8M3I77M11I51M10D15M4D7M2I39M5I27M11I14M2I15M 236/321 73.5% 363/94230402 0.0% 68/321 21.2% 113485105 76729450 +3229 chr4 + 190214555 145917680 145917679 145917778 99 TCAACTCCAAGGTAGCTGGTCAA-----------AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAACAACATTCATATGCCATTTCCTGGGAGTGACCACTTATAT chr4 + 94230402 5886751 5886750 5886855 5886751 5886750 5886855 105 TTAATTTTAAAGGAACTGGTAATTTGCCTATGGTAAACAAAAAAAGAAAAACAAAGGGAAAAAGAAAAAACAACATTC-----CCATCAATTTAAAATGACTAGTTAGAT .:..:.::..:.x.:.....x.x-----------...x.......:.....x...::::...................-----....:xx:.x::.:....:.x...x.. 23M11I44M5D27M 67/94 71.3% 105/94230402 0.0% 16/94 17.0% 140030929 50183626 +3817 chr4 + 190214555 145923481 145923480 145923560 80 CAGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACCGCTTGAACCCAGGAGGCAGAGGCTGCA chr4 + 94230402 76033199 76033198 76033276 76033199 76033198 76033276 78 CAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......:--....x....:.:...........::........x.xx.x...x.:...........:..x:xx:.....:. 7M2D71M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% 69890282 NA +8388 chr4 + 190214555 145926922 145926921 145927268 347 TCTGGATTGTGAAATTTCTCTCTTTCTATAAATGTCACAAAG---CAGCTCACTGTAATTTGAT--TTCTCACTTTCTTAAGGTCAGATTAAAACCCAGTAAGTTATTATTTGAAGTTTGCCT----TCCTCTAGAAGGGAGAAATCATATAGCACATTTCAGTAACGTTTCCTGGAGCGTAGGGTCTCCCACACTTTGTTTCCTCCCAAATACAGCTGTGTTTCATGCTCTAGAGAGGACTGTT--GGGTTAACAAGTACGGCCAAACAAGTGCAGATTAGAAAACGCCGCCTAATTCTAGGCCATTACGCAAAGGCAGTGCTCTCCATATGGAGCACATAATTCAGGC-CTCAGACA chr4 + 94230402 32433670 32433669 32434020 32433670 32433669 32434020 351 TTTAGATACTTAAATTATTC-CTTCCTACAAATGCCACAGGAATCCTGTTCCCTATAATTTACTCCTTTCCTCTCTCCCAAAGTCAGATTAAAACACAGCAAATTAT-ATTCTCTGTTTCTCTAATTCCCCCCACAAGGACGATATTACA----GTATCTAAGGGAAGCTTCAGGATCTGTTTGTTTTGTCGTGCT--GATTGCTACCAAAGACAGCTGCTTTCTTTGCCCCTGAGAGGATTGCTTGGGGTTAACAAGCGAAGCCAAACAAGAGAGGATTAGGAAGCTACTTGTAGGGGTAGGCTAACACACAGAAGCAGTTCTTCCCATGTAGAATAGGCACTTCCCACTCTTAGACA .:.:...xx.x.....x:..-...:...:.....:....:::---.x.:..x..:......:x.--..::.x..:..::..:.............x...:..:....-...:xxx....x:..----:..:.:.x....:x..x..:.:.----::..:.x..x:.x.:...xx.:xx:..xx.x.:.x:.:::..--.x..x..x.....x.......:x..::x...:.:x.......:..:.--...........::x:..........x.x:......:..:.xx.x:x..:xxx.....:.x:..:..:.:.....x..::....:.:..::.x::.x...xx:.-..:..... 20M1D21M3I19M2I41M1D15M4I23M4D42M2D47M2I103M1I8M 219/339 64.6% 351/94230402 0.0% 20/339 5.9% 113493252 76721303 +11536 chr4 + 190214555 145930715 145930714 145931702 988 TATAACCCTAGGTCAGACTGTGAAAGCAGAGTTGCTAAAGGCCACATTCTGACCTCAGATCGTGGGCGCGTATCACTGTGCATTTTATAAAATTAGCTACAGTGCAGCCTCTCTGTGTGTGTGCGTGTGTGTGTGTGTGCGCGCGCATGTGTGTACATGCAGTGAAGCTAACTTTTAAAAAATAAACAGCAACATGTACCCATGCCATTTAAGATTAGTATCAAGCCAAAGTCTGATTTTAATTTATGAAACTACTTTGTAACTACAACAATTCTAGCCCAAGGTGGGTCCCTGGGGAATGA--CAGGAGTCATCAGAGAG--GCCCCTGCCTCAGCACCTAGTCA--CACACTATTCTCCAATATCATAAAAAATAACTTACAGAGAGAGGACAGAAATACAAAAAACTTACTCCCAAACAGAAGGGAGAAAGCAGCCAGAAATGTCAGCCCATCAAGTACTCTTAGCTATTTCTAAGGTCTGTGCTTC-ACACATTATTCTCTTATAAAATATGATAGAAGACATTTTAGCTACCATGAACTATAAAGTG---TTGTACACTTAGCCCTAGATGGAATGAATTACTGAGCTACACCTGGCAAAGCAGGAGACAGAAAAGTG-TATCTCAGAAACAGGCAC----CATCATTTACAATCTATACCTTTAAAATGTGGTTCTAAGAGTACATTAACTAAGCCAATATAGTTATGAAATCTGATGAAAAAA-------AGCTCACATCCTA-CCAT---AACTA--GGCCTGGCCTGGATTTTTTTCCAATAAGAGAAAACCTAAAA-----TCTATGC----CTTCGCCACAAAGCTCATGTTCTTGTAAAACCTTATGCTGGAAATCCTTAACGCCCCCTAAA-GCCCTATTCTGTAGGTCATACTCTGATTATCTTGTTCTGTGATC-AGTCTGATTAAATTATACAAAATTACCAATACATCACTCAGAATGGAGAGATTAGCTCCAGCCTACTCTGTTTGTTTTTCCTTGTCCTGTCCTAATA chr4 + 94230402 32436374 32436373 32437309 32436374 32436373 32437309 936 TACCACCCTGAGTTAGTCTCCAAAAACAAAA--ACTAAAAGAGAAGCTCTTCTGTGAATTTTTGGATACAAGTTACTGAATCCCGCATTAAATTAGCCACAAT------------------------TGTGGGGGTGTACGTGTGCAAGTGTGCAGA----GTTATGCTGACT--------GTACCCTGCAACATGCCTCCTTTGAACTCAAGTCTGG-GTTAAGCC-----------TGAATTTTAGAA------TTCAAATTAAAATAATTAGAA---AAAAAAAATCCTTGGGGAAAGGGTTAGAAACCTTCTTGAGGTTATTTTTCCTTCAGTCCAAATTGAGCCACATCATTTACTGTTCTTTATAGAAACAGCTTTAAAATATGAAATAAAAAGGCAGGGGG-----------ACAGAAAAAGAGAATCACTTGAAAACTGAAGTCCATTACATACTGTTAGCCACTTTGAACTCCAGGATTTCTGCATACTGTTTTCATGAAACACATAA-------CACTTCAGACTCCATATATCATGAGGGGGGATTATATGTGTAAATATAAATGATACACATCATAGTATCATGACTGACAAACCAGGCAAGAAAAAAATGGTATACCAGAAACCAGAACAAAACATTATTTAGAAGATGAATTCTTCAAGTATGACTCTG-GAGCAGTTTAA--GAGCTCTAACAGTAAAAGGATTCGAGGCACAAGCCAAATTAGCTCT--TCCTAACCATCTGAACTAATGTCCATATTATGATTTCTTTGCAACGTGAAAGAA---AAAAGGTCCTCTATATGGTGCTTCATGACAAATCATATGC-CTAGTAAAGCTTCATGTTAGAAACCCTTTTAACTTCCAAAAAGTCCTCTTTTGTAGGTCATGCTCTCATTATCTTGCTCTGGGATCTTGTCTGATTAAATTATAGGAAATTACTAATACTTCACTTTGAACAG-----CCAGCTCCTCCTGGCTCTTCTTCTTCTTCTTTTTTTTTTTTTGTTA ..:x.....::..:..x..x::...:..:.:--:.....:.xx.x::...xx:x.x.:x.:x...:::.:x:.:....x::x::x:..x........:...:.------------------------....x.x....:..:.:...x.....:.x.----..x.x...:...--------:..xx.x........:x:..x.xxx.:.:...x:.:.-:.:.....-----------.x.....xx...------..xx..:..x..:....xx.:---..::x:::...:.......x.:--:..:.::.x..xx:::.--:::::.x.:....:x.xx.x.x.--....::...:x.::x.x.:xxx.:...:.:...xx.:.x.x:::.:.:...x:..:::::-----------......::::::..x..x::::...:xxx..:....:.x:....x.....:.:..:x..xx:.x.x::...-:..:.:.:..:..x.:x..x.:..:.-------..:..:..x:x....:x.::..:.:.x.---..:..:::x..:x:x..:...:x.::x..:.:x.x:::.::x...:....x....x:.x.:....:..-...x:.......x:.x..----...:.....x..xx.:x.:::..x..:.:..::...:-...:.xx....--:...:xxx.:...x.x:::..::..x.x.x..:-------.....x--.....-....---.....--.x..xx:::xx.....:...x...::x..:.:..---....-----.....::----....::x.....x.x:...:-..x.....:.:.:...:.:....:....xxx:.::..x...-.:...x..:..........:....x.........:....x....-x................x:.......:.....x.....:x...::.-----::......xx.:x:....x:..x..:...:..x.::.x.::.:x.. 31M2D70M24D30M4D12M8D37M1D8M11D12M6D21M3D22M2I17M2I23M2I60M11D71M1I26M7D28M3I68M1I18M4I37M1D11M2D33M7I6M2D5M1I4M3I5M2I34M3D4M5I7M4I20M1D41M1I44M1I46M5D46M 545/897 60.8% 936/94230402 0.0% 130/897 14.5% 113494341 76720214 +3027 chr4 + 190214555 145938583 145938582 145938637 55 AGAAGAGGGGTTTTCTTCTTTTCTTTCCTTTCTTTTTTCCTTTTTTTTTTTTTTT chr4 + 94230402 702576 702575 702630 702576 702575 702630 55 AAAAGAGGCATTTTCTTCTTTTCTTCTGATTCCCCTTTTATTTTTTATTTTTTTT .:......x:...............::xx...:::...:x......x........ 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 145236007 44978548 +3732 chr4 + 190214555 145938916 145938915 145938984 69 CTCTCTCTCGCTCTCTCTCTGTCACACACACACACACACA-AGAGGCACAGACTGAGGGAAAGAGCGAGA chr4 + 94230402 75248049 75248048 75248118 75248049 75248048 75248118 70 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaaga ..::.....x..........x...................-....:x.x...xx...:....:.:x:... 40M1I29M 55/69 79.7% 70/94230402 0.0% 1/69 1.4% 70690867 NA +3001 chr4 + 190214555 145938920 145938919 145938961 42 CTCTCGCTCTCTCTCTGTCACACACACACACACACAAGAGGC chr4 + 94230402 12601304 12601303 12601345 12601304 12601303 12601345 42 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGC .....x..........x........:...........::x.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 133337616 56876939 +20153 chr4 + 190214555 145939492 145939491 145940035 544 ATGAACATTACAGCTACTTGACAAAGAG---------AGGAAAATAAGATTAGGTCACCCCTGATGGTTGCTTTAACTGCTACGTGATACTCCTAGAGTGCACACAGCAATCTTTACTTCGGAAATTCACTTTTTCCCCTGCTATATACTGCAGGTATAT--GAAGTTT---ACCCTGAAGCAATTCCAGTGTGCATTATGAGCCCAATATAGCAGTTTTCATTAACTGATACATA-CTTTCATTACCTTACAAATCACACATCTTTCTTCAAAGAGAGACATAAAGGAGA----AAAATAGAAAAGGA--CGGGTCTCACTAGAGCACAAAAGGTACTTGGTGAAAGAGGACTGTTCTCTTTGTGACTTGCAGTCATTTGGATAAAAGTTCACTCAGAGGTTGTTAATGATTTAAACTCCAAAACCTGCTACTATAATTGAAATAAAAATGGTCTGAAGAAGAGTTGTTTCATAAAACTCT--CTTTGTAAGAGG-AAACTTTGAACTTAGCAGAATACATTAT--ATGTCATGAGTCATGTAGCTAGAAAATAAAAAGGTGCATTATT chr4 + 94230402 32443918 32443917 32444466 32443918 32443917 32444466 549 ACGGACAGCACAGCTCCTGGAGAAGGGGGCGGGGGGAAGGAGAG--AGATCAGGTCACCTCTCATGGTTGGCTTCACTGCTACATGGCACTCCTA-CGTGCACACGGCAACCTACGCTCCCGCACTGTACCTT----CCTGCTGTA--ACGCAGGTACACACGAAGCTCTCCATCCTGAAGCAACAGCAG-GAGCATCCTGAGCCCCGTACAGCAGCTTTCATAAACCAACACAGAACTTTCATTGCTTCACAAACCCCACACCT-----CAAAGACAGACATGAAGGTGAGGAAAAAATAGAAGAGGGACTGGGTGCGACTGAAGCACAGGAGG-ACCTGGTGCCAGGGAAGCGTGCT--TTGTGACCTGCAGTCGTTTG--CAGTCGTTCACGGAGAGGTTGTTGATGATTTAAACTCCGAAAGTTGTTACTACAATTGAAGT-AAAGCGGTCTGAAGCGCGGCTGCTTCGTACAGCTCTCACTTTGTGTGGGGAAAACTTTGAACTTAGCAGCATACATAATCAAAATCATGAGTCAGATGATGCAAGACTAAAAGAGTGCATTCTT .:.:...x:......x..x..x..:.:.---------....:.:--....:........:..x.......x:..x........:..::.......-x........:....:..x::..:.x.x.x.x:..:..----......:..--x:.......:.:--....:.:---.:..........:xx...-.x....:x.......x:..:.....:......x...::.:...x.-........:.:.:.....:.x....:..-----......x......:....x..----.........:...:--:....x:x...::......::...-..:.....xx..:.:.x:..x..--.......:.......:....--:.:xx......xx..........:..............:...x:..:.....:.......:.-...::.........x:x:.:..:...:..x.:....--......:x.:..-..................x......x..--.x:..........x:.:::xx:.:.x.....::.......x.. 28M9I7M2D49M1D37M4D9M2D12M2I7M3I18M1D45M1I28M5D21M4I14M2I24M1D23M2D20M2D62M1D36M2I12M1I28M2I43M 394/523 75.3% 549/94230402 0.0% 47/523 9.0% 113495574 76718981 +3175 chr4 + 190214555 145965141 145965140 145965209 69 GGAGGGTGTGTGTGTTCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x...:..::..:...:......x.......:....x.x::..:.x:...:.xx.x....:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 68118377 NA +3258 chr4 + 190214555 145972242 145972241 145972324 83 CACCTGTGATCCCAGCTACTTGGGAGGCTGAGGTACAAGAATCACTTGAACCTGGGAGGTTCAACCTGGGAGGGTAACATGAT chr4 + 94230402 76033207 76033206 76033285 76033207 76033206 76033285 79 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG----AACATGAT ...x...::.:...........::........x:x::x...x..........::.:..x..:::x...x::----........ 71M4D8M 55/79 69.6% 79/94230402 0.0% 4/79 5.1% 69939035 NA +3102 chr4 + 190214555 145975228 145975227 145975287 60 AACAGAGCAAGACTTCATCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAA chr4 + 94230402 18047932 18047931 18047991 18047932 18047931 18047991 60 AACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAA ......:...xx...:x...:............x........xx:..:.x..x...:... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 127927296 62287259 +3034 chr4 + 190214555 145975237 145975236 145975309 73 AGACTTCATCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAACCCATA chr4 + 94230402 55094089 55094088 55094161 55094089 55094088 55094161 73 AGCCTTCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAACACAAAGATACGCCTA ..x....x::..x.x..::.x................:.......x...xx..:...x.x:..:.x..x.x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 90881148 NA +3196 chr4 + 190214555 145975237 145975236 145975318 82 AGACTTCATCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAACC------CATAAGGTAAAAT chr4 + 94230402 12520817 12520816 12520904 12520817 12520816 12520904 88 AAGCTTCATTTGAAAAAAAAAAAAACCAAAAAATGAAAGAACAATAACAACAAACAAATGGGTAAAACTGGACAAAATGAGATAAAAT .::......:.x.............xx......x:...:..x..x..x..x..:x...x..:x.....:------x..:..:...... 69M6I13M 60/82 73.2% 88/94230402 0.0% 6/82 7.3% 133454420 56760135 +3055 chr4 + 190214555 145975249 145975248 145975306 58 AAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAACCC chr4 + 94230402 36268526 36268525 36268583 36268526 36268525 36268583 58 AGAAAAAAAAAAAAAAAAAAAGCAAAATATTTCAAGATGAAGAGGAGGGAAAAATCCC .:....................x....x.xxxx....x:....::.:.......x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 109706723 80507832 +3040 chr4 + 190214555 145975737 145975736 145975784 48 TCAGAATGGCTAATATGAAAAAAAAAGACAAAAACAAAACAAAAAAAA chr4 + 94230402 71832161 71832160 71832208 71832161 71832160 71832208 48 TCAGACTGGCCAATCTGAAAAAGAAAGAAAAAAAAAAAGCAAAAATAA .....x....:...x.......:.....x.....x...:......x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 74143576 NA +3385 chr4 + 190214555 145978141 145978140 145978222 82 GTGGTGGCACTCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:::.........x.xx.x...x::......:..:.:..x.xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 69944940 NA +3254 chr4 + 190214555 145983982 145983981 145984054 73 TGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGTCTGGGAGTTCAATGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.:.........::........x.xx.x...x::.....::.::.:..:.:x:x....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 69950777 NA +25507 chr4 + 190214555 145986203 145986202 145987012 810 TCTGAATGTC--TTTAAAAATGTTTAATCATCATAATGGATAAAACAAT-TGGAGCAGTCTGACATTGTTTATCTTCGTGAGGTTGAAAAAATTCAAAAATAAATTGTTTGTATAGTGCTGAAAATGGAGGTTGGGATTAAATTGACCTAAGGTTAATGATAGGATGAAGATCAACTGTCAAGCAGTGAGAAAATGCTATAGCCTTGGCAATAATTAATGTTAAACAATGGCTGGAGTTCAGATTATTGTAATGAGAGATGATATGCTATTCTGACTGTCCAGAGGTCAATGTTACTTGGTTTCCTATGGTTAGGGGTAAATAAGGAGG-----ACTTTCTAGTAAAAACAGTGTAACTGGATACGATGATCCT-GCAGCGACCCAAGGTTCATGGGAGACATTGTTTGTATGTATAAAAGGTTTATTAAATATGTAACAACCAATGTTTTATGGAATTCAGTGCCTGAATG-----AGGAGTGATGGGGGTGGGGAGG-TGGAGCCACGGAGGTGTTTATCTAGCTGCAAAAAATAGACTAAGATTATATTTTCCAGAGTCCCATATGTTGGCTATTATACTGTAATTCTAATGAATCTTTTC-TGAATCTTTCGTTTTTTGAATGGCACCATTCTTCCCATAATATATCATCAGTTGTCCTTGCTCTGATAATGTATTACATTAATATATCATTAAAGCAGCAGATATATTAGAGTAATACATTATTAGAACAAAGCACTCTGGTGGTGATATATTTTGCAAAAGATGGCTCCATCTTG-GCAGCCCAGGTCCAGAAGCAGA------GTCAGTTCAACAAGACAGAAGGT chr4 + 94230402 32461595 32461594 32462399 32461595 32461594 32462399 805 TCTGGATGGCATTTTGGAAACATTTAATTAGCATACGACATAAAACAGTGTAAACCAGACTGACTTCACGTGTTTTTCAGTGATTAAAATAATGGAAAAAAAAGTA------ACAGTAAAGAAAATGAAGGTTAAGATTAAAGAGGCCTACAGTTAATGACAGGCTGAAGTTCAACTGTCATGTAACT-GAGAATGTTTGAGAACGGACAACAATTAAAGTCAAGCAAAGGATGAAGCCCAGATTATTATAATGAGATATGATATGTTCTTCAGACTATCTGGAGGTTAATGTTACTTAGTTTCATATGGTTACGGATAAGTAAGTACTGCACTACTATATAGTAAAAATAATGTAGCTGGATACAGTCTGCTTCACAGTGACCCAAGGTTAATGGTAGTTGCTCTTAGTATATTTAAAAGGTTTAAAAGAGATATAACAACCTCAGCACTGCA-AATCTAGCAC---AATGGCACTAGAAA--ATGGCACTGAAGAGGCTAGCATAATACTGGTATTC--TTGGTTCCATGAAA------------GCAGCTTCTAGTGTAATGTATGTTCGCTGTTAT-CTCTAATTACACTGAACGTGTCCATGAATTCTTTCATTCCTGAACAGCACCACCTTTTGAGTAATAGATCATTGGTATGCATCACTCCGATAAGGTATGACACTAATGTATCATTAAAGCAACAGATGTATTGGTGTAATAGATCACTGGGACAAAGCACTCTGATGATGATGTATTTCTGAGAAGATGACACCATCCAGAAAAGACGAGGCCCAAGAGAAGACTTTTGCTCCGTTTAGTAGAATAAGAAGT ....:...x.--...::...::......:.x....xx:x........:.-.::.x...x.....x.:::x.:.:..:xx.x.:..:...x...xx.....x..:.x------.:...:xx.......:.....::.......xx.:....x:........:...x.....x..........x.:.::x-..:....:.xx..xx:x.:...:......x..:..:...x..x..:..::.........:........x........:.x...x....:..::.....:..........:.....x........x..:...:....x.xx-----...x.x.........:.:....:........::.xxx.:.-:...:...........x....x..x:::.x..x....:.x...........xx.:.x..:........xxx.:x:.:::-...::..::.---....-----..:.:--....x:x..::....-.:.x::x.::xx...:..:--:.:.:.x..x:...------------::.x:...:..x..xx::......x...:....-..x.....x:.x....:x.x.:.-.....::..:xx..::....::......:::..:xx:.....x.....::..xxx.x.::...:.....x....x...:....:.............:.....:....:.x......x..:.:.:.:.............:..:....:.....:xx.:......:.x.....:x.-:x..x.x...:...::..x...------x..x...:.::.::.:.::.:.. 10M2I37M1I56M6D76M1D140M5I40M1I79M1D10M3D4M5I5M2D15M1I19M2D14M12D33M1D23M1I176M1I22M6I23M 537/782 68.7% 805/94230402 0.0% 51/782 6.5% 113524608 76689947 +3247 chr4 + 190214555 145992620 145992619 145992679 60 GCTTATAGTAAGAGTATATTTAG-----TTTTTGTTGTTGTTGTTTTGTTTTGGTTTTGTTTTGA chr4 + 94230402 5942436 5942435 5942497 5942436 5942435 5942497 62 GTTTGTAGTAA---TATCTTAAGATGTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTGTTTTAA .:..:......---...x..x..-----.........................x.........:. 11M3D9M5I37M 51/57 89.5% 62/94230402 0.0% 8/57 14.0% 140050184 50164371 +3528 chr4 + 190214555 146008242 146008241 146008333 92 CTTTCTTCCTTCCTTTCTTCCCTCCCTCCCTCTCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCT chr4 + 94230402 26457970 26457969 26458061 26457970 26457969 26458061 92 CTGTTTCCCATTCTTTTTTCCTTCAATTCCTTTTCCTTCCTACTTTATTCTCCTGCCCTGTTTCTCATTTCCTCTTTCATTCACCCTTTTCT ..x.:.:..x.:....:....:..xx.:...:.::...:..x:.:.x....::.x:::.x.....:x:..:.......x...x:.:...... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 119550272 70664283 +4095 chr4 + 190214555 146008261 146008260 146008388 128 CCCTCCCTCCCTCTCTCTTTCTTTT-----CTTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCT-TCCTTCCTTCCTCCCTTCTCTTCCCTTTCCCCTTC chr4 + 94230402 89201202 89201201 89201335 89201202 89201201 89201335 134 CCTTTCCAGCAGCTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTC ..:.:..xx.xx.....x.x.....-----:..........:...:....:..:xxx..x.x::......x..xx:..:...:....::..:....x.-:...........x:..:.x...xx.x.:..x:... 25M5I68M1I35M 87/128 68.0% 134/94230402 0.0% 6/128 4.7% 56807059 NA +3135 chr4 + 190214555 146008270 146008269 146008351 82 CCTCTCTCTTTCTTTTC---------------TTTTCT--TTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTC chr4 + 94230402 51335294 51335293 51335392 51335294 51335293 51335392 99 CCTCCTTATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC ....::.x.x.......---------------...:..--.....:x:xx....:x:.:.......x...:........:....:.:...:.:...... 17M15I6M2I59M 61/82 74.4% 99/94230402 0.0% 17/82 20.7% 94672976 NA +3101 chr4 + 190214555 146008276 146008275 146008389 114 TCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTTCTCTTCCCTTTCCCCTTCC chr4 + 94230402 65620262 65620261 65620375 65620262 65620261 65620375 114 TCGTTCCCTTCATTTGTTTTTTCTTCCATTTGTCTTTCTTATCTTATGCTAGTCCTCTTTCTTGTTTAGTCCCCACTTTACTTCTTTCCAAATACTTCTTCCCTGCTTACTCCC ..x...::...x...x....:.:...:x.:.x.......:x.::.x.x:.xx.::........x:..xx.:.::x.:..x....:....xxx:x::........x:::x..:.. 114M 68/114 59.6% 114/94230402 0.0% 0/114 0.0% 80388014 NA +3386 chr4 + 190214555 146008283 146008282 146008354 72 TTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ...........x..............:..:.:...::x:..::x:.:.::x..x..:....:x...x..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 76844936 NA +3261 chr4 + 190214555 146008306 146008305 146008373 68 TTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTTCTC chr4 + 94230402 49829841 49829840 49829908 49829841 49829840 49829908 68 TTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC .....x.xx...x:...:x:.:x..........::..:............::...::..:..:::... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 96178465 94036090 +3491 chr4 + 190214555 146008319 146008318 146008379 61 CTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTTCTCTTCCCT chr4 + 94230402 7218317 7218316 7218377 7218317 7218316 7218377 61 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT ....:..:....::...x.:.:....::.:.:..::..:....:..:..x........... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 138790002 51424553 +3931 chr4 + 190214555 146008428 146008427 146008599 172 TCCTTTCTTCCCTACCTCCCTCTCTCTCTCTCCTTTCTTCTTTCTTTCTCTTTATTCCTTCCTTCCTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTTCCTTCCTTCCTTCTTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTTCCT-TCCTTCCTTCTTTCCTT chr4 + 94230402 33237587 33237586 33237758 33237587 33237586 33237758 172 TCCGTCTCTCCTTTCCCCACCCTGCCTGTCTCAGTTTCTAATCCTGTCTCTCTCATCTCTCACTGTTTGCATGCTGAGTTTTCTCCTTTGTCTTTGGTCTGTTCTTC-TGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTCT ...x.:::...:.x..:.x.:..x:..x....xx..::.xx.:..x.....:.xx..::..x:.x:..x.x:x..xxx..::..:.:..x:.:..xx..:x.:....-.x....x......:.x::::...x.....:.........::x...:.-.:..x.:..x.:..::. 107M1D47M1I17M 102/171 59.6% 172/94230402 0.0% 2/171 1.2% 112770841 77443714 +3128 chr4 + 190214555 146008483 146008482 146008596 114 TCCTTCCTTCCTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTTCCTTCCTTCCTTCTTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTTCCTTCCTTCCTTCTTTC chr4 + 94230402 93283207 93283206 93283320 93283207 93283206 93283320 114 TCCATCCATCGTCCCTTTTTCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTCTCCATCCATCCTCTCCCCCTCC ...x...x..x.:...:::...:.::..:..:.:....:xxxx.x.:x::.:..:...xxx.:x:.:.:..:.:x:..x..x.:....:......x...x....::.::.:.:. 114M 65/114 57.0% 114/94230402 0.0% 0/114 0.0% 52725276 NA +3035 chr4 + 190214555 146008485 146008484 146008558 74 CTTCCTTCCTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTTCCTTCCTTCCTTCT--TTCCTCCCTCCCTTC chr4 + 94230402 20861466 20861465 20861541 20861466 20861465 20861541 76 CTTTCATCCTCTTGTCATCTTTTTCCCTTCTCTCCCTTTTTCCCTCCTTCCTGTCTTCTAATTTTTATCTGCTTTC ...:.x....:::x:.x..::..:..:.:..:.......:...:........x:.....--..::.x:..x.:... 59M2I15M 50/74 67.6% 76/94230402 0.0% 2/74 2.7% 125147019 65067536 +3400 chr4 + 190214555 146008516 146008515 146008608 93 TTCCCTTTCTCCTTCCTTCCTTCCTTCTTTCCTCCCTCCCTTCCCTTCCTTTCCCTTTCTCCTT--CCTTCCTTCCTTCTTTCCTTCCTTCCTTC chr4 + 94230402 53764536 53764535 53764628 53764536 53764535 53764628 93 TTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCAT--TTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..:x....:...:::..:.:.....::..:.........x:x...x.--..:.....x..:..:--....:::..x.....x:.x...:.:..:. 47M2D15M2I29M 62/91 68.1% 93/94230402 0.0% 4/91 4.4% 92243980 NA +3294 chr4 + 190214555 146011199 146011198 146011282 84 TACTTTAGCATTTTAGAAAATATACTAACTTTATATCTCTCAGACATCCAGATTGATATCTGTTTGTTTTGATTTTTTAAAAAA chr4 + 94230402 46028412 46028411 46028495 46028412 46028411 46028495 84 TGCATTAACACTTCAGAAGATATTTTAATTTTACATTTATCAGATGTTTGGTTTAATTTTTTATTGTTGCTGTTTTCTAACAAA .:.x...:..:..:....:....x:...:....:..:.x.....::.:::.x..:..x.:.xx.....x:x:....:...x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 99982787 90231768 +3272 chr4 + 190214555 146021245 146021244 146021300 56 TTTTTTTTTGTTGTTGTTTTATTGTTTTTTTGTTTTTTGTTTTTTTGTTTTTTTTT chr4 + 94230402 63648326 63648325 63648381 63648326 63648325 63648381 56 TTCCTTTTTCTTACAGCTGTATTGTTTTTTTTTTGTTTGTTTTTTTGGTTTTTTTT ..::.....x..::x.:.x............x..x............x........ 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 82372919 NA +3056 chr4 + 190214555 146021247 146021246 146021296 50 TTTTTTTGTTGTTGTTTTATTGTTTTTTTGTTTTTTGTTTTTTTGTTTTT chr4 + 94230402 66269056 66269055 66269105 66269056 66269055 66269105 50 TTTGTTTGTTGTTGTTTTGTTGGGTTTGGGGTTTTTGTTTGTTTGTTTTT ...x..............:...xx...xx.x.........x......... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 79752191 NA +3138 chr4 + 190214555 146057715 146057714 146057763 49 AGTAAGGGCAAAACAAACAAACAAACAAAAAACCAAACAAACAAGAAAA chr4 + 94230402 23148125 23148124 23148173 23148125 23148124 23148173 49 AATAAAGACAAAACAAACAAACAAACAAAAAACCACACACAACACAAAA .:...:.:...........................x...x.xx.x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 122909590 67304965 +3033 chr4 + 190214555 146057725 146057724 146057796 72 AAACAAACAAACAAACAAAAAACCAAACAAACAAGAAAATTACTTTTGCACCAACCTAATAGTTTATTCCCA chr4 + 94230402 18047000 18046999 18047071 18047000 18046999 18047071 72 AAACAAACAGACAAACAAAAAACCCAACAAATCGGAAAGATGGATGTGCAGCAATGAAGCTTTTTTTTTCCA .........:..............x......:x:....:x.:xx.x....x...:xx.::xx...x..:... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 128010725 62203830 +3398 chr4 + 190214555 146061230 146061229 146061339 110 TTTCTCTTTCCTTTTCTCTTTCCTTCCTTCCTCCTTCTTCCTTCCTTTCTTGGCTTTTCTTTTCTTCTTTCTCTTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTC chr4 + 94230402 27101898 27101897 27102006 27101898 27101897 27102006 109 TTGCTCCTACTTTCTCTACTTCCCTACCTCCTCCCACTCCCCTTCTTTTTAATAATTATTTTTCTTCTTGCT-TTTCATTTTGGTTTGCTGCTGTTGTTTGTTTTTACTC ..x...:.x.:..:...x:....:.x.:......:x..:..:.:....:.x:xxx..x:..........x..-....x:.:.xx....:.x..x.:x..:x....:x... 72M1D37M 71/109 65.1% 109/94230402 0.0% 1/109 0.9% 118959332 71255223 +3333 chr4 + 190214555 146061241 146061240 146061402 162 TTTTCTCTTTCCTTCCTTCCTCC----TTCTTCCTTCCTTTCTTGGCTTTTCTTTTCTTCTTTCTCTTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 72471347 72471346 72471512 72471347 72471346 72471512 166 TTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTCCCTTTCTGACTCCTTT .........x.xxx::...:..:----.....x:..x::...:.xx:............:...:....xx::x.x:....x.x..x..x:x.x.....x.x::.x.:.x:x.x:..x.:x:.xxxx.:::..:....:....x..::..::......xx..:::.. 23M4I139M 95/162 58.6% 166/94230402 0.0% 4/162 2.5% 73589894 NA +3412 chr4 + 190214555 146061274 146061273 146061404 131 CTTTCTTGGCTTTTCTTTTCTTCTTTCTCTTTCTCTCT------CCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCC------TTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCT-TTCTTTCTTTC chr4 + 94230402 26784763 26784762 26784906 26784763 26784762 26784906 144 CTTTCTTGTCTTTCCTCCTCTAATAGTGCATCTGCTCCTGGCGACAGTTTTATTCTGCTTAATGTTTCTCCATTTTTTTTTATTTCTCCTACTGAGCTGTATTATCCTCCTTTCCTCTCTTTCTTTCTTTATGTTCTCTTTTTC ........x....:..::...xx.xx:x.x.::x...:------.xx..x.x.::.x...xx.x......:x...:...:.x.....:.:------:.x:x..x..:.:.......:.............x.-....:.:.... 38M6I46M6I36M1I11M 88/131 67.2% 144/94230402 0.0% 13/131 9.9% 119276511 70938044 +3311 chr4 + 190214555 146061290 146061289 146061389 100 TTTCTTCTTTCTCTTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCT chr4 + 94230402 53984338 53984337 53984437 53984338 53984337 53984437 100 TCTACTCTGTCTCTTCCTCCTTCCTTTGTTGAGATCCTTCCTTCTATCTGTTCTTTAATCTGTTTTTTCTTCTTTTTCAAACTCCAAGTCCATTCCTTCT .:.x:...x......:...::.........xxxx..:...:..:.x...x..::..xx...x.:..:::.........xxx..::xxx.:.x...:.... 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 92076952 NA +3894 chr4 + 190214555 146061312 146061311 146061468 157 CCTTTGTTTCTTTCTTTCTTTTTCTCT---CTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCT---TTCCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCT chr4 + 94230402 64726422 64726421 64726585 64726422 64726421 64726585 164 CCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ...x::..::.:.::x..:...x....---:.....xx:.....x:..:x...:.:x.xx..:.---.x.......x::.x.:x.:x...x.-...:x.:.:....:....:x.xxxx.:...:....:..::.:x:........:.:...:....:.....:. 27M3I34M3I25M1I71M 98/157 62.4% 164/94230402 0.0% 7/157 4.5% 81334890 NA +3115 chr4 + 190214555 146061319 146061318 146061413 95 TTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x...:.x.:.:.:.xx.:::...:......:....x...xx::..x.::..x:x.:.....x.....::..::.:...... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 62734385 NA +3466 chr4 + 190214555 146061322 146061321 146061423 102 TTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 34734802 34734801 34734908 34734802 34734801 34734908 107 TTTCTTTATTATAATGATTTTCCTTCTCTCTCTCCTTTTAATTTCCTTTTTCTCCAGTTATTTTAGGAATATTTTTTTTTTTACTTTTTTTTCCCCTATCTTTGTTT .......x..x.xx.xx:....:......:...:.:...xx...:....:.:...xx.:x..:.-----.x:...:...:..x....:...::::..x.....x... 64M5I38M 69/102 67.6% 107/94230402 0.0% 5/102 4.9% 111326520 78888035 +3752 chr4 + 190214555 146061323 146061322 146061417 95 TTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x..:x.:x.....x.:.:...xx.::.........:......x...xx:...x.::..x:x.:.....x.....::..::.:...... 95M 63/95 66.3% 95/94230402 0.0% 0/95 0.0% 62734389 NA +3610 chr4 + 190214555 146061327 146061326 146061421 95 TTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:...x:..x.:x.....x.......xx.:::....:.:.:......x..:xx:...x.::..x:x.:.....x.....::..::.:...... 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 62734393 NA +3111 chr4 + 190214555 146061337 146061336 146061421 85 CTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTT-TCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.......-....x:::.:x.:..::....::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 10M1D74M 57/84 67.9% 84/94230402 0.0% 1/84 1.2% 88689311 NA +3487 chr4 + 190214555 146061339 146061338 146061465 127 CTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTT--GTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:::....xx.x....:::..:...:.:.:x..::.:.x....xx.....--x....xxx:::..x....:.:x.xx.......:..:--.:.::...........:..::.x:.. 61M2D36M2D26M 78/123 63.4% 123/94230402 0.0% 4/123 3.3% 82364222 NA +3177 chr4 + 190214555 146061340 146061339 146061485 146 TTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTT---CCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTTTCTTTCTTCTTTTTTT chr4 + 94230402 52146242 52146241 52146390 52146242 52146241 52146390 149 TTTGTGCTTCTCTCTTCCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTCTTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTC-TTCTCCACTTCTACTCCCTTT ...x.x::...:......:.:......:...:..:---.x.:.xx....:x:.x.::....x..-x...:.x.x:....:.:..:x:x.x::x.x.x.x.....::.xxx:.:...........::..-....::x:....x..:::... 35M3I26M1I63M1D21M 89/145 61.4% 149/94230402 0.0% 5/145 3.4% 93915098 NA +3214 chr4 + 190214555 146061343 146061342 146061469 127 CTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCT-CCTTTCCGGTGTTTTCT---CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.:::...-......:xx.x:.....---....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::......::......:..x:.. 12M1D17M3D94M 76/123 61.8% 123/94230402 0.0% 4/123 3.3% 82364226 NA +3204 chr4 + 190214555 146061348 146061347 146061469 122 TCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTT chr4 + 94230402 32895598 32895597 32895719 32895598 32895597 32895719 122 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTT ...x...:.::..::..:::x..:......x..x....:.x.x.:..::x:.xx....x..xx:x.:..:.:x::.:.:...x:.x......x.....:......xx:.:x.x.x:..:... 122M 72/122 59.0% 122/94230402 0.0% 0/122 0.0% 113165750 77048805 +3698 chr4 + 190214555 146061349 146061348 146061484 136 CTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTTTCTTTCTTCTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCT----------CTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTC-TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x.....:..:...:.xx.x...:..----------....:....:.:x..::.:.x....xx....--.x....xxx:::..x....:.:x.xx......-...::...::..........:...:..x... 29M10D31M2D32M1D31M 85/123 69.1% 123/94230402 0.0% 13/123 10.6% 82364232 NA +3077 chr4 + 190214555 146061351 146061350 146061433 83 TTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:......x.:.:.x:::.....::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 88689324 NA +3404 chr4 + 190214555 146061359 146061358 146061533 175 TTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTTTCTTTCTTCTTTTTTTGAGACACGGTCTAACTCTGTCACCTAGGCTGGGGCTC-AGTGGCATCAT chr4 + 94230402 82976631 82976630 82976794 82976631 82976630 82976794 164 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTT--TTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTTCATATTAAA-------TCACCTTCTCACCC---CTGAGACTTAAATAGCATCAT ....x.:.x.:.:..x::.:..:.x....:::x::.x....:.x.x.xx..:..x.:::.:..:...:::..:....--....x...xxx.::.:.:.x.:x.....:...:x.........:x.x.x.:.-------.x..::.x.....:---...:.:..:-.:.:....... 77M2D52M7D14M3D9M1I11M 100/163 61.3% 164/94230402 0.0% 13/163 8.0% 63084728 NA +4023 chr4 + 190214555 146061364 146061363 146061489 126 TTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTTTCTTTCTTCTTTTTTTGAGA chr4 + 94230402 63697118 63697117 63697243 63697118 63697117 63697243 126 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGA ...x..:..:.......:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:::.:..:.....::..::...:.:...x...:... 126M 76/126 60.3% 126/94230402 0.0% 0/126 0.0% 82364246 NA +3576 chr4 + 190214555 146061367 146061366 146061484 118 CTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTC-TTTCTTTCTTCTTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:.::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.::..::..:.::..-...........:..... 101M1I17M 73/118 61.9% 119/94230402 0.0% 1/118 0.8% 82364250 NA +3106 chr4 + 190214555 146061378 146061377 146061472 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx.:::..........:.:.:x:.:xx:.::x.....x.x..:..::x.....:...::.:...... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 62734444 NA +3545 chr4 + 190214555 146067754 146067753 146067877 124 CTCCCTCCCTCCCTTCTTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTTCCTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTC chr4 + 94230402 2692241 2692240 2692364 2692241 2692240 2692364 124 CTCTGTGCCTCCTTCCTCTTCCTCCATTAATTGCTTTCTGATTAGTCCCCATTTCTTTCTATATTTTCTGCTTACAGTGCATTTTTTTCTTTGTTTCTTTCTCCATCGTTTCCTTCTTGCTCTC ...:x.x.....:.:..:.:.:...x.:xx.:x:.::..xx:.xx.::..x..:.....:x.x.:..::.:.:x:xx.x:x.:.........x..........:x..x....:.....x..:.. 124M 75/124 60.5% 124/94230402 0.0% 0/124 0.0% 143375513 46839042 +4767 chr4 + 190214555 146067755 146067754 146067909 155 TCCCTCCCTCCCTTCTTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTTCCTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTT-----CTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .::..x:...x..x..:.....:.......:x.:.x.:.x..::.x:x:.x.:.....:x..::..x::...x..:.:x.::.:..........:-----.:x:...:::x.......x::.:...::...:......:.:.x.....:x:x.x..:... 95M5I60M 95/155 61.3% 160/94230402 0.0% 5/155 3.2% 95891488 NA +3657 chr4 + 190214555 146067799 146067798 146067925 127 TTTCCTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCT---TTTTTTCTCTTTCTTTCTTTTTCTTTCTCT-TTCTTTTCTCTTTCCCT chr4 + 94230402 48874866 48874865 48874991 48874866 48874865 48874991 126 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTT-----TATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ..::..:.:...:x.x.x...:.:x..x.xxx.....x....:....-----.x....:.x...x.........x.:.x.---..::.......x:.......x....::xx.-..:x.x........... 47M5D28M3I30M1I17M 86/122 70.5% 126/94230402 0.0% 9/122 7.4% 97192933 93021622 +4081 chr4 + 190214555 146067803 146067802 146067957 155 CTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTTCT-TTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCT chr4 + 94230402 3415316 3415315 3415469 3415316 3415315 3415469 154 CTTTCCTTTCCTATTCTTTTTTCATTCCTAGTCCTATTCCTTTC-ACATTCCTATTCAATTCCTATTCCTTCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTT-TGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCTCCCCACCCTTTGCT ...........:x......:x.:x..:..xx.:..x..:.....-x:x..:..x..:xx..:..-...:.....xxxxxx..:..........x.:.:.....-.x.:...:.:.:x.xx...x:..:x.:..:.........:::x:.::..x.. 44M1D19M1I38M1D52M 99/153 64.7% 154/94230402 0.0% 3/153 2.0% 142652487 47562068 +5228 chr4 + 190214555 146067836 146067835 146068079 244 CTTTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTC-------TTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTT-------CCCTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCTTTCTTTCTTCTCTCTCTCTCTCTATCTCTTTC chr4 + 94230402 85792634 85792633 85792884 85792634 85792633 85792884 251 CTGTTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTC-----CTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCT--CCTCTTTGATGTTTCTGCCGCGGTCTTTAGCTGTTTC ..x.....:.:.......xxx.x.........xx...:-------....x...:x...:xxx:.x........-----......:.xxx...x.:..:.x..x..-------:.x.:..x..::........x:....:.:::x.x.x.x:...::x.x...::....:xxx...x..::.::x:..xx.:..x..xx.:..........:.:.:....--.:.....xx.x:....x:.x.xx...:..x..x.... 38M7I28M5D27M7I107M2D37M 152/237 64.1% 251/94230402 0.0% 21/237 8.9% 60275202 NA +3040 chr4 + 190214555 146067847 146067846 146067903 57 TTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTT chr4 + 94230402 90927825 90927824 90927881 90927825 90927824 90927881 57 TTCCTCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCTCCT ..:..::.:.x.......:...:........xx...........:.:.::.::..:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 55140022 NA +3141 chr4 + 190214555 146067867 146067866 146067994 128 TTCTTTCTTTCTTTT-TTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTT---------TCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTCCTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x......-......:.x....---------..:x.:.x:...:.x.x.xx...:.x:..::........::..:..:.:.:.x.:.xxx..::::..x:.x.::...:...x..::..... 15M1I13M9D91M 76/119 63.9% 120/94230402 0.0% 10/119 8.4% 63091236 NA +3026 chr4 + 190214555 146067875 146067874 146067928 54 TTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCC chr4 + 94230402 38772185 38772184 38772238 38772185 38772184 38772238 54 TTCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCCC ..............x.....:......:::::..:.:..::.x:::........ 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 107295690 82918865 +3150 chr4 + 190214555 146067878 146067877 146067976 99 TTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC .:.x.......:.:.:....x.xx......x.:.:x..:.:..x..x.xxx.::.x.:x::x:.x.:x.:.:....x.....:..:...:......... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 115536666 74677889 +3280 chr4 + 190214555 146067906 146067905 146068025 120 TCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTCCTTCCTTCCTT chr4 + 94230402 32895598 32895597 32895719 32895598 32895597 32895719 122 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTT ...x...::...:.:.:...x::.::.:.:x..x:.....x.x.:.::.x..--....x..xx:x.:..:.:x::.:.:...x:.x......x.....:.......x:.:x.x.x:...... 52M2I68M 73/120 60.8% 122/94230402 0.0% 2/120 1.7% 113172308 77042247 +3065 chr4 + 190214555 146067921 146067920 146067969 49 TCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCT chr4 + 94230402 47060627 47060626 47060675 47060627 47060626 47060675 49 TCCCTTCCTTCTTCCCTCTCCCTCCTCCTCTCCTCTTTTCCTCATTTTT .....:...:..........:...:.:.....:.::....:.:x...:. 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 99007294 91207261 +16794 chr4 + 190214555 146097891 146097890 146098259 369 GCAGAAAGAAATCAAGATAAGAAAA-----ATAATCCCTTGAGTGACACACAGTTATAATTAAATAACACAGAACTAAAGCCAAGCATTTTTTGTTATGCCCTCTATGAGTAATACTTGTGCTTTGAAACTTTTAAAATATTTAAGGCAAGAAGAAATGAAATGCATGGCAACCAGTTAAGGTCATACATTTAGGACAAAAATAATAAAATATTAAAATGAAAGAAATAAATGTTCTAACTGAAATACTGAGATTCTGTGGAGATGAATTATTCAAAGTAG-GAAACACATGTGACCTCCAATCTATTATATAACGGGAGAAATGG-TGGTAAAGTTCAAGTGTAGAGCAA--------TGCCAAGAGATGAGAAAATGATGGC chr4 + 94230402 32469356 32469355 32469730 32469356 32469355 32469730 375 GCAAAAAGAGAAGAAAATAAATCAATTTTAATAATAGCTTGA--------CAATTACAATTAAATAATCCAAAGCTCAAGCTGAGCATTTTT-GTTACACACTGCATGAATGATGTTTGTACTTTGGAACCTTTAAAATATTTAAACAGAGAAGAAATGAAATGAACTGCAACCAGTTAAGGTCATCCATTTAGGATAAAATTGATAAAATATTAAAATGAAAGAAATAAATTTTCAAACAGAGATACTAAGGCTTCGTAGAGATTTATTATTCAAAGCAGAGGAACATGCATGACCTCTAGGCCATTACATAATGGAGAAAGTGGATACAAAAGTTCAAATGAGCAGAAACTGAAGGCTGCAAAGGCAAAAAGGGAAGATGGC ...:.....:.xx..:....:xx..-----.....xx.....--------..:...:..........:x..:.:..x....::.........-....::.x..x:....:.:..::....:.....:...:..............:xx:...............x.:x..................x.........:....x.:............................x...x...x..:.....:..::.::..:.....xx...........:..-.:....::::.......:.:x.:....:....:..:::..:...-.:xx.........:..x:x..x..--------...x...:x.x:.::::.x...... 25M5I12M8D42M1D188M1I44M1I24M8I25M 272/360 75.6% 375/94230402 0.0% 24/360 6.7% 113628535 76586020 +3608 chr4 + 190214555 146104172 146104171 146104263 92 AGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGA--------GAGAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ...:...:::..x:.x...............:.....x...::xxx...--------.::.x..:...:.x......:.:...::..:.::...:..x.. 49M8I43M 63/92 68.5% 100/94230402 0.0% 8/92 8.7% 94955793 NA +3472 chr4 + 190214555 146104176 146104175 146104312 137 AGAGAGAGACAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAACAGCCAACAGAGAAATAAAGGAACGGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGG------------ACAGCATTTTGAAGCATGAAGGAAGGGAG ...:...::x..xx.x...................:.x...::xxx...:x.::.:x.::.x.x:...::x......:.:.:.::..:.::...:.------------.....xxx:x..::x..:......x.... 96M12D29M 78/125 62.4% 125/94230402 0.0% 12/125 9.6% 94955797 NA +3313 chr4 + 190214555 146104190 146104189 146104282 93 AGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGA chr4 + 94230402 51148379 51148378 51148471 51148379 51148378 51148471 93 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGA ...:...:::..xx.x.:.............:...:.....::xxx...:xx::..x.::.x.x:...:.x......:.:.:.::..:.:... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 94955811 NA +8857 chr4 + 190214555 146105111 146105110 146105546 436 ATAGAGAGAGAAAAAACACATTAGTCGA-TTTGTAGGCAACTATATTCCTCTCCTCCTCT-TGTGGCTGTTTCTCTACTTCCTTTAAAATAAACAAAGGCCAAAAGTGACTTCGGAAAATTCCCAAAGGGAAGAATAAAGCCAACATGAAAGACTGTCAAAGGCAGGCTTGCCGGATTTATAAAAGCAGGGAACCCCTCCTACCCTGTCTCCATCCACACCCACCCCCTACTCCATACACACACTTCTTTTTTAGCCAATGCCTCAGTTAGCA-CAATACTAACATTTCAGGGAAGGCTTGGGTGATTTTTCTTTAGGAAATAATGGTCAACACTATTCAAAAACCAAACAAGCTAAAGCTGTTC-CTTGA---ATTGGTGATATATT------TGCAAAGATGAAATTACACAATCCAGACATGCTAGTTATGAACACAGAAAATCTT chr4 + 94230402 32472342 32472341 32472725 32472342 32472341 32472725 384 ATACACAGAACAAGCATACATTAATTGAATCTGAGGGCAAGTATACTTCCTTCTTCAACCATATGGACAAGATT----TTTCTTTAAAATAAA--AAGGCCAAAAAGGGACTGGAACAATGCCCAAAGGGGAGAATAAAGACA--------GACACTTAATGGTGAGCTCACTAGATTTATAATAGCAGGGGAC--------------------------------------------ACTATCATCCTTTCCAGCCAGATACCCAGTTAGCAGTAATGCTTATATCACAGGAAAGGCCCAGGAGATTCTTCTTCGGAAAATAATGGATACGGCTATTAATATACTGGGGTTGCCGCAGCCATCCACTTCAGATATTGATCATAAATTACATTGTTCAGATACAAAATTACATAATCCAGGCAGGC-------GATCACAAAAGCTTTT ...x.x...:x..:x.:......:.:..-.:..x:.....x....:.:.::..:..xx.:-.:...x::xxx:.----..:............--..........:x.:x:.x.:.x...x.........:.........x..--------...xx.:..x..:::...::.::.........x.......:..--------------------------------------------..xxx.x..:...::.....:xxx.:.........-:...:..x.:..:x....:.....:::..x....:.....::.:.........x:.xx:.....x.x.x..::::xxx..::x...::.:.-...x.---....:.x...x...------.x..:.x.::........:.......:..x..-------..x....:..:x.:.. 28M1I31M1I13M4D15M2D48M8D43M44D35M1I91M1I5M3I14M6I32M7D16M 252/371 67.9% 384/94230402 0.0% 78/371 21.0% 113632769 76581786 +3604 chr4 + 190214555 146106404 146106403 146106486 83 CATGGTGGTGAGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCAAGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x......:.........:.::........x.xx:x...x.:..........::..x:xx:..:..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 70073207 NA +3202 chr4 + 190214555 146120076 146120075 146120145 70 CAGTGGTGAGCTCCTGTATTCCCAGCTCCTTGGGAATCTGAGGCAAGTGGAACACTTGAGCCCAGGAGTT chr4 + 94230402 76033199 76033198 76033266 76033199 76033198 76033266 68 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ........--.x.x....x.:......x....::.:x.....x.xx...:.:.......:.....:..:. 8M2D60M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 70086877 NA +3019 chr4 + 190214555 146137801 146137800 146137864 64 CATAGCAAGATTCCATCTCCAAAAAAAAAAAAAAAAAAAAAATAGAATTAAAACAGTCAAAAAA chr4 + 94230402 29522398 29522397 29522461 29522398 29522397 29522461 64 CAAAGAAAAATCACTTTTACAAAAAGAAAAAAAAAAGAAAAATGTAACTAAAACATGGAAGAAA ..x..x..:..:x.x.:.x......:..........:......:x..:.......xxx..:... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 116615403 73599152 +41710 chr4 + 190214555 146153593 146153592 146154759 1167 TCTTTCCAGCCT---TTCCCAGGTACATGGGATTTAGCTGCATAGCAATTATCAGATTACTTGATAAAAATCCTTTTCTGCTCAGTCAGAAGTGAGTAGCAGTTTTAATTAGGGGCTTAGGACAAGGACATTTGAATATCAGCCTCTGAGAATATAAAGCTCTTTTCAAAACCA-GAACCAGTATTTTCTACACAAAATGCTAAACCTTCAAGTTCTCATTTGCAAATAAAAGATGGCAAGTTTCTGGCATTTACTTACTGTCATTTATCCTGGCACAATAATCAAGC-ACCCTGCTAATGACGG----TGTGACTGTCAATATCACTTTCAAGTTACGAGACCTATTCAGCATAGGATAAAGGGGAGAAAGAAGATGGTCAACAGGCAGTC-GGCTTTCATTTTAACACTCCCTGGAGGATTTCCATTACCCTTTCAGTGTCATGCCTTACCTTTTTTCCTTCTCAAGGTCAGCTCTGTCTAGACAGTTCCTAGCTTCAACTTCCTGCAGCTAATGCATATCCACAATAGGCTTGTGACCACAACCTCACACTGTACCCTTCCACCTGAATTAGGAGAGTCCCTTCTTTTCTGTATTATTGGTGACCTTTCTCTAGGTTAAAAGGTCTCTTCTGCAGCAGGCAGGTCTGACTTGTTATGGTGATTGCACTGCGGAAAGC-TGCTTCCACCTTGTTAGAAGTGACATCACTGTACATTAAAGACATCATATCTCCTTTCATATTAAAATGCCTGTCAGTTCTCCTGCTCAAAGGTTGTAAATCTGCCAGAGTAGCCCGAGCTTGGGGAGTTTTCATTATGAAAATATGAAGATAAGCACTCTGTTTTACTGTCAAAGGGAAAGAGGTAGACTTCTAGTAATGACATTACTTTAGGAAATAAATATACATTTTCTTAACTGAGTGTTATATAAGCA-----AATTTTGAAAAGATAGCTCTCTCCGTTTTTAAAAAAAGTTTTTAAAA-TTCAGGCTTAGTAAGCTGACTGCCATAGCTCAGATAGGAAATATAGCTGGAGTATGATTTATTAATGCATGTATTTCACACTTGCTCTTATAGTAAATCATTAGACATTTTCAATGATTTTAGCCCTTCATTTTCAGTTGTCCAGTCTAAGAAGTGGCAAAGGAATACTTAACCCGCAATTCACCTTTAGTTCACA chr4 + 94230402 32480759 32480758 32481842 32480759 32480758 32481842 1084 TCTTTTCAGCATATATTCTTGCATACATGG--TTTAAGAACAGCACAGCTTCAGAATTCCTAGATAAAA-------TCT-TTCACTTAGGGGCTGGAAGCATATTTAAGAAGGGACTTAAGAAAAGAACATTTTAA-ATCAGC--------------------TTTTAAAATCACTGGCAAATATTTCCTAGACAAAGTGTTATGTTTGTTGGT-CTAATGTA-GAATGAAAGACG-TAAGTTT-TGAAACTGGAGTGCTGT--GCTCTCCTAGTGAAACAATCATGTTGCCCAGCTAATGGCAGGCTATATGGCTGTCAATATCACTTTCAAGTTATTAGGTCCAATCAATGTTGAATAAAAGG---AAAAAGGGTGGTCAACAGGCTACCTAGCTTTCAGTTTAACACTCCCTTGAGGATTTTCGTTATCCTTTC----------------CTTTTCTGCTCTCAAGGTTAGCTCTAGCCAGACTATTTCTAGCTTCAACTTCCTGGAGATAATGCACATTCACAATAGCCTCGCTCCTCCGTC-----AGTGTGCCCTTCCACCTGAGGAAGCAGAGTCCCTTCTCTTTTCTATTATTTGTGACCTTTTCCTGGGTTAAGAGGTCGCTCCTGAAGCAGACAGGTTTCACTTCTTATGATGATTGCAGTGCAAAAAGCAGGCTTCTACCTTGTTAGAAGTGACATCACTGTACATTAAAGACATCATATCTCCTTTCATATTAAAATGCCTGCCAGTTCTGCTGCTCACAGGCTGTAAATCTGCCACAGTGTCTTGTGCTT-GGGAGCTTTCATTATGAAAATATGAAGATAAGCACTCTGCTTTACTGTCAGAAGGAAA-AAATAGTCTGGTAGTAATAAGGTTGCTTTA-AAAATAAATATACAATTTCTTAAACATGGTTTATTTAACAAAGAGCAATTTTAAAAAGG-AATCCTTTTTATTTC------AATTCCTTAAAATTTCAAGCATAAAA-----ACTGGTATG--------AGTAAAT-----TCCTGTAGAATTTATTAATGCATGGGCTGTGCACTTGCTCATGCAGTAAATCATTAGATTTTCCCTTTGACTTTGGCCCTCCAGCCTTGA-----------GAGAAATGACATATCGGAATCTAACCTGTTTTTCATCTTCATATCATA .....:....x.---...:::x:.......--....:xx:..xx:..::.x:x::...x..x.......-------...-:...x.:..::.:x:.x....xx.....xx....:....:..x...:......x..-......--------------------...:....:..-x::.x.:.....:...x.....:..:..x:::.x:x:..-..x..x.:-:...:.....:.-:......-..:x.:.x:xx.:....--x:.x....:.::x..:.....x.:-:...x.......:.:.----.:..:.......................:x..::.:.x...:::.x.:.....:..---...:.:.:............x::.-:.......x.............x........:.:...:......----------------:....::x:.........:......:x.:....x:..:.................x..x.......:..:........x..:.:xx.:x.:x.-----.x...:.............:xx..x............:..:.x.......x.........::..:......:.....x..:...x.....:.....:.x....x.....:........x...::.....-x.....:..................................................................:.......x.......x...:.............x...:x.::.x....-.....:.................................:..........:.:.....-.::...x..xx.......:.x:..:.....-:.............x........x::x.xx....x...xx.-----......:.....:-.:::..:.:::...:------..x.::......-....:..x..:x.-----....x:..:--------..x....-----.xxx...x:...............x::.x::.........x.::..............:x..::.xx...:...:.....:..x::.:::-----------:....:..:..x.xx::x.::.....:.:xx....:...:.xx...:. 12M3I15M2D37M7D3M1D56M1D6M20D11M1I39M1D8M1D12M1D7M1D17M2D24M1I16M4I56M3D24M1I44M16D93M5D129M1I122M1D58M1D30M1D41M5I13M1D15M6D12M1I13M5D9M8D7M5D90M11D48M 796/1067 74.6% 1084/94230402 0.0% 117/1067 11.0% 113672834 76541721 +3244 chr4 + 190214555 146155751 146155750 146155801 51 GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAACCTCTCAGGAGGAA chr4 + 94230402 958819 958818 958869 958819 958818 958869 51 GCATCAAGAAAAAAAAAAAAAAAGAGAAAAGAGCAAACATCTCAGAAGGAA ...xx..:...............:.:....:::.....x......:..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 145196932 45017623 +24036 chr4 + 190214555 146171351 146171350 146171816 466 GTGTAGCACAGATTTCCAACATAAACTATAATTCATAAAGGCCAACACAACTCTTTTC-TTTGTAGCTGGGTAACCATTTATGTTTGAGGTGAAGATGTTAATATGGAAATTTTGTGAGCTAGGAAAGAGGATGAACGCTATCACTCTAATTTATGACCTTTCATATAAGGCCAAATGTAAAGGCAACTTCAATTGTTTTATATCTCAGGGCCAGCACATAGCAGATGTATGAAATTTGGA-GTGTTAGACATAAACTTTTATTACCAAATTATAAATAATTTCTCCCACTTATAATGTTCACCTTTCAAGTTCATCTTGATTAAAATACAAGGGCAGCTTCACACCGATTTCACTAAATTT--TACAGCTGAGAGAGGTTTTCTAGAGTTCACGGTGGAGTATAAAGCATCACAGCATTTGGGAGATTCTCCTTCCAGGAGCTCAGACTCTGATCCTATCTCTTTTAAA chr4 + 94230402 32488729 32488728 32489193 32488729 32488728 32489193 465 GTGAGCCACTGACTTCCATCATTAAGTTCAGCTGGCAAAGGCCAAGGCAACTCTTCTCATTTAGAACTTTGTTACCATTTATGTTTGAGGTGAAGAAGCTATTATGGAAACTTTGTGAGCTGGGAAGGA--CTGAAAACTACCATTGTAATTTATGACCTTTCATCTAAGGCCAAATGTAAAGGCAATCACAATTGTTCTATATCTCAAGGCCAGCACATAGCAGATGTATGAAATTTGGAAGTGGTAGACATAAACTTTTATTACCAAATTATAAATAATTTCTACCACTTACAACGTTCACCTTTCAAGTTCATCTTGATTAAAACACACGGGCAGAATCTGACTGATTTCAATGAGTTTTATACGGCTGGAAAAATTCCCCCCTGCTTCATG--GAACGATAAAGCAACACCATATTTTAAAGAATGTACTTGCATT-TTTTAGACCAAAGTCCTTTTTCATCTAAA ...x:x...x..:.....x...x..x.x:.::.x::.........x:........:..-...:x.:..xx..x.......................x.:..x........:..........:....:..--x....x:...:..:.x..................x.....................::x........:.........:................................-...x.......................................x.......:..:..............................:...x......xx..xx..:.......x.:.:...--...:....::.:.:x.:::.:xx:x....:.--.:.xx........x...x::....x::...x.x.x...x..xx-x:.:....:xx::....x.:..x.:.... 58M1I70M2D110M1I120M2I31M2D43M1D29M 362/461 78.5% 465/94230402 0.0% 9/461 2.0% 113682622 76531933 +4367 chr4 + 190214555 146171922 146171921 146172216 295 CTTGGGTAAGCAAAACGACATACTACTTTTTCTGAGAAATTTGCCCACCAGTCAATGAGCTTGTATCAC---TTCTTAGAAGGTATTCAACAACCAGAGAGTGTCTGTCTGTTTCCTTATTTTCTTTTTTCCCCTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTT chr4 + 94230402 19215278 19215277 19215566 19215278 19215277 19215566 289 CTTAAGTAGGCAGACTGAAATACTCAGTTCTCTG-----CCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCA-----CTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTT---------TTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...::...:...:.x:..x.....xxx..:....-----::.x..:x:.x..:::.:.::..x...:x:---.....:xx.:x...xx.xxxx...-----:x.:::...x..xx.x....:..::.xx:x...x.xx:...:.::..::::..::....:.....:...xx....-----......x..::...x......xxx....x.x..::::xx:......---------..x.......:x:.x.:....-----:.:....xx:..:.....x:...x:x......:x..:...x...:. 34M5D30M3I24M5D75M5I46M9D21M5I46M 166/276 60.1% 289/94230402 0.0% 32/276 11.6% 126956644 63257911 +3328 chr4 + 190214555 146172026 146172025 146172232 207 TCTGTTTCCTTATTTT--CTTTTTTCCCCTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCTTTCTTT chr4 + 94230402 19215365 19215364 19215566 19215365 19215364 19215566 202 TCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGC-------AATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTT-TGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATC-CTCTGTCTCT ..:::..:.x.x....--.x.x..::....xx.x...x.xx:.::::...:.:::.::::.:...:...:...xx....xx.-------xx......x..::...x......xxx....x.x....::xx:.::..:..x:......-.x:.x.:....xxxx...:::..--........:x:...x.x.:.....x..-....x...:. 16M2I64M7D58M1D23M2I27M1D10M 121/198 61.1% 202/94230402 0.0% 13/198 6.6% 126956661 63257894 +3572 chr4 + 190214555 146172042 146172041 146172170 129 CTTTTTTCCCCTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC------CCTCTTTTCTTTCTTCCTTTTTATTT ....x....:....:.:..xx.x.:..:..:..:....:.:x.::....x.:.:xx.:.:.x....xxx:::..x....:.:x.xx.......:..:------.:.....::..::...:.::..x... 97M6D26M 76/123 61.8% 123/94230402 0.0% 6/123 4.9% 82474925 NA +3365 chr4 + 190214555 146172048 146172047 146172181 134 TCCCCTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTCTTTC--TTTCTTTCTTCCTTCTTTCTTTCTTTCTT chr4 + 94230402 19215414 19215413 19215558 19215414 19215413 19215558 145 TCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCT .....:...:.::.:...:....:xx.::.xx:xx......x..::...x......xxx....x.x..::----:......:.x.:.:.:..x.:x..:..-----.....:.:--:..:.....x....x.x.:.....x..:. 70M4I27M5I8M2I29M 87/134 64.9% 145/94230402 0.0% 11/134 8.2% 126956634 63257921 +3686 chr4 + 190214555 146172049 146172048 146172212 164 CCCCTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTT chr4 + 94230402 19215411 19215410 19215566 19215411 19215410 19215566 156 CCCTCCCCCCCCCCTTTTTTTT---------TTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTT--TTTATTTCTTTTGCCATCCTTTAAGGCTTC--TCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...::...:...:....:....---------.....xx....-----......x..::...x......xxx....x.x..::::xx:.....--...x......:.x:.x.:....xxxx....--....xx:..:.....x:...x:x..:..:.x....::x...:. 22M9D11M5I45M2D30M2D43M 102/151 67.5% 156/94230402 0.0% 18/151 11.9% 126956638 63257917 +3660 chr4 + 190214555 146172052 146172051 146172173 122 CTCCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT ..::x.:.....:::..::xx.x:.....:...:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......:..::..:.-..............:..x:.. 60M2I40M1D21M 78/121 64.5% 123/94230402 0.0% 3/121 2.5% 82474935 NA +3416 chr4 + 190214555 146172054 146172053 146172220 167 CCCTCCCTCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTT chr4 + 94230402 19215399 19215398 19215566 19215399 19215398 19215566 168 CCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTT-----TTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...x.xx:.:::.::.:..::.:::......:...:...xx....xx.x-......x..::...x......xxx....x.x..::::xx:.....-----...x......::x:.x.:....-----:.:....xx:..:.....x:...x.x.::....x:::...x...:. 49M1I45M5D22M5I46M 99/162 61.1% 168/94230402 0.0% 11/162 6.8% 126956655 63257900 +3387 chr4 + 190214555 146172072 146172071 146172200 129 CTTCTTTCTTT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTCT--TTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT chr4 + 94230402 6297114 6297113 6297251 6297114 6297113 6297251 138 CTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATT ......:..x.-....xx:.......x:...x.x.x....:.x..::..------......:--x.....x.:.......x.:x....:..x.....:.:.x.x:xx.::..:x:x..xx....:...:...:..x.. 11M1I37M6I7M2I74M 87/129 67.4% 138/94230402 0.0% 9/129 7.0% 139874958 50339597 +3230 chr4 + 190214555 146172079 146172078 146172207 129 CTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTTC------TTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCT chr4 + 94230402 6297114 6297113 6297254 6297114 6297113 6297254 141 CTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCT ...:...:.x:x....xx:.......x:...x.x.x....:.x..::..------......------...x.:.......x:.x....:..x....::.:.x.x:xx.::..:x:x..xx....:...:......x:.x.. 49M6I6M6I74M 84/129 65.1% 141/94230402 0.0% 12/129 9.3% 139874965 50339590 +4134 chr4 + 190214555 146172081 146172080 146172227 147 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTT------------CTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCTT chr4 + 94230402 50176266 50176265 50176426 50176266 50176265 50176426 161 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT ......x...:x..x:::.:.......:....--.:x:.:x::...x:x.:x........x.::..:x.x..:x...:.x.....:.........:------------.::x:......x::.:...::...:..:..:..:.x.....:x:x.x..:... 32M2I62M12I53M 93/147 63.3% 161/94230402 0.0% 14/147 9.5% 95995815 94218740 +4606 chr4 + 190214555 146172086 146172085 146172259 174 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCTTTCTTTCTTCATTTAAGAAACAGTCTCGCTCTA chr4 + 94230402 50176267 50176266 50176446 50176267 50176266 50176446 180 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTTACACAGACATTACAGCTCTA .....x...:x..x:::.:.......:....--.:x:.:x::...x:x.:x........x.::.:.x.x..:x...:.x:..............:----.::x.:.:.::x:......x.:........:.:.:.:..:.:.x:....:x:x.x.:.x..xx.x.:...x.x:x...... 31M2I62M4I81M 107/174 61.5% 180/94230402 0.0% 6/174 3.4% 95995819 94218736 +3305 chr4 + 190214555 146172107 146172106 146172235 129 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCTTTCTTTCTT chr4 + 94230402 6297115 6297114 6297246 6297115 6297114 6297246 132 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTT .....:..---....xx:.......x:...x.x.x....:.x......xx::.x.::....x:x.:.:.x...:.:.:.x..x::...:.x::.......x.x.xx..::..x.x:.xx..:...:...:.. 8M3I121M 80/129 62.0% 132/94230402 0.0% 3/129 2.3% 139874992 50339563 +7580 chr4 + 190214555 146182917 146182916 146183027 111 TTAAAATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAGCAAATCATCGGACGACCAGTTGTGGTAAAATTAAATTCTGGAGTGGATTATCGAGGTAATATTTTCA chr4 + 94230402 32490555 32490554 32490665 32490555 32490554 32490665 111 TCAAGATGAGTCTCCGAAAGCAAACTCCGAGTGACTTCCTCAAACAGATCATTGGGAGGCCAGTTGTTGTAAAATTAAATTCTGGAGTCGATTATCGAGGTAAGATCTCCA .:..:........:..:........:..x.........:.x..:..:.....:..:x.:........x....................x..............x..:.:.. 111M 92/111 82.9% 111/94230402 0.0% 0/111 0.0% 113692362 76522193 +3012 chr4 + 190214555 146183846 146183845 146183892 47 CTGAGCACTGTACTGGGTAATTTTCTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 81473542 81473541 81473588 81473542 81473541 81473588 47 CTGAGCACCGTACTAAGAAAATTTGACTTTTTTTTTTTTTTTTTTGA ........:.....::.x..x...xx:.................... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 64710304 NA +3035 chr4 + 190214555 146185643 146185642 146185684 42 TTTTTTGTTGTTGTTGTTGCTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 74136540 74136539 74136581 74136540 74136539 74136581 42 TTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTT ............:......:.x.x..x............... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 72049103 NA +10065 chr4 + 190214555 146187250 146187249 146187410 161 CTTTTTGACTAAATATGTCTGCAGGGGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCCCTGGAGCAGACAGAAGAATATGTAAATGGACAACTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGGTAACATTTCTTCGCCCTACAGT chr4 + 94230402 32493323 32493322 32493483 32493323 32493322 32493483 161 CTTTTAAACTGTCACTCTCCTCAGGTGTCCTGGCTTGCCTGGATGGGTATATGAATATAGCTCTGGAACAGACAGAAGAATACGTAAATGGACAATTAAAGAACAAGTATGGGGACGCATTTATCCGAGGAAATAACGGTAACTCCTCCTTCCTGTGCTGT .....x:...:xxxx.x..:x....x....................x..:...........:.....:..............:............:.:.....:...........:.................:..:......x::..:.:x.:x.:.x.. 161M 129/161 80.1% 161/94230402 0.0% 0/161 0.0% 113693927 76520628 +4185 chr4 + 190214555 146189608 146189607 146189717 110 TTTTTTCTTTTCA--GTGTTGTACATCAGTACACAGAAGAGACGGATGTGAAGACACCAAGAGAGCAACGCTTTTCATAGTTGGATATATTTTTTTATGAATTTTTTCTAAT chr4 + 94230402 32494695 32494694 32494790 32494695 32494694 32494790 96 TTTTCTCTTTTCACAGTATTGTACATAAGCACACAGAAGAGAAGGATGTGAAGATGCCAGAAG---GAGGCTCTTC-------------TGTATTTGTGAATCTCTCCAAAT ....:........--..:........x..:............x...........::...::..---:.x...:...-------------.x.x...:.....:.:.:.x... 13M2I48M3D10M13D23M 75/94 79.8% 96/94230402 0.0% 18/94 19.1% 113694913 76519642 +9253 chr4 + 190214555 146190978 146190977 146191282 305 TAAAGATCAGAGAGTAATTGGAAACAATTATTTTTTAATTAATAACTTGGGAAAGGTGAACAG-AAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAATAAAA----CACTTTATGCTATGCTTCAATAATTTATCACTTCTTGACAGGGGCTTGGAAAAGGTCCAGTATGTAAGTACAAATCACCAATTTGCTCTTTTATAAATGAGTTCTTTTAAGGAGAAAATGGATGGCTCTCCAAGTGGAGCATACATGTTCTCATTTGTTTTGTAGAATATGTGGGGCT-GCAGGTTATTGTGTCCCTTCA chr4 + 94230402 32496182 32496181 32496474 32496182 32496181 32496474 293 TAAAGATTAGGGAATCATTCCAAA---TTATTTTGCAATTAATAGTT---AACCTTTCGACATTAAACACTTCAGAAGCCACTTCAGAACACACA-----AATAGAGATGTTACTTTATAATATCCTTCAGTAATTTATCATTCTTTGACAAGGGCTTGAAAAGGGTCCAGAAAGCAAGTACAAAT---CAACTTGCTCTTTTGTAAGGGACTTCTT----AAAAAAGAAAGCTGTGCCTCCAAGTAGAGCGTGCAGTTTCTCATTTACTTTGTCCTTTATATACAGCTGGTTGGTTACTGTGGTCTTCCA .......:..:..:.x...xx...---.......x:........::.---:.xxxx.x:...x-..:..:....x.:.x:x:.x.x.x:::....-----....:.:----:.......:x...x.....:..........:.::......:.......:...:.......x.x.:..........---...:..........:...:x..x.....----::.:..:.x:.x..xx:........:....:.:..xx.........::.....xxxx...:.:x:...-.:x.....:....x:.:.:.. 24M3D20M3D13M1I31M5D7M4I75M3D28M4D68M1I21M 202/287 70.4% 293/94230402 0.0% 24/287 8.4% 113694796 76519759 +3059 chr4 + 190214555 146192422 146192421 146192507 86 AGCCCAACTGCATTAACTATAA--------TTTTTTTTTCTCCACAAAAAGAAATTGTTGGTGAAAGGAAGACAACCTTCAGTTTTTCTCCCCA chr4 + 94230402 33031380 33031379 33031473 33031380 33031379 33031473 94 AGCCACACTGCGCTCTCTGAAAAACTGATCTTTTTTTTTCTTCATAGAAAGAGAAGATTGTTAACCGTAAGACAACTTTCCATTTTTCTGCTTA ....xx.....::.xx..:x..--------...........:..:.:.....:.xx:...x.:.xx.x........:...x:.......x.::. 22M8I64M 60/86 69.8% 94/94230402 0.0% 8/86 9.3% 113161042 77053513 +3311 chr4 + 190214555 146196640 146196639 146196717 78 TTTCTCTTTTCTTATTCTTATCATTTTTCAGTGTATTATAAAACATTAGAACTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 77182422 77182421 77182499 77182422 77182421 77182499 78 TCTGTCTTTTGTTTTCCTGTTCCTTCTTTGCTAGAATATTAGAAATTAGAAATGTCTTTTTTTTTTTCTTTTTTTTTG .:.x......x..x.:..xx..x..:..::x.:x.x...x.:.x.......x.x.:...........:.......... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 69014218 NA +8646 chr4 + 190214555 146216918 146216917 146217168 251 AAGCTGCTGTTTGTCATGATACAGGA--GAGGGCAGGATGAGGATGCAGGCTGCCCTCGTGGG------CTGGGCTTGTACCACCCTCTGCCTGGCTTCCTGCTCATCTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATGACATGCAGCCCAAGCACATCCAAGCCCAGC--CTCAGCACCAGGACAGCCACCACATCACCATCCACACCCACAGGACTTCCTATGCACCAGGTGACAAGATTCCAGGTATGTAC chr4 + 94230402 32502602 32502601 32502858 32502602 32502601 32502858 257 AGACTGCTGCT-GCCATCACTCTGGACGGAATGCAGGA-GAGGCGGAAGGCCCGCCTGGCGGTTGCCGCCCGTGCGTGCACCGTGCTCTGCCTGGTCTCCTCCACATCTGCCTTCTCGCATGGCGCCAGCCCCTCTGCCTGTGCTGACATGATGCCCAGGCACCTGCGGGCTCAGCTGCACAGCCCCACG--AACAACTACGTTACCGTCCACACCAACGTGTCCTTCTACGTCCCGGGAGACAAGGTCCCAGGTGAGGAC .::......:.-.:...x.:x.x...--..:x......-....xx.x....:xx...x.:..x------.:.x..x..:...::x..........::....x.x..........:..x.....:......x.xx:x.......x.......xx.....:....x.x.::..:....--.x....x...x.--.:.x..:..:.:...:........x..:x.x.:.:...:.:x..:..x......:.:......:x.x.. 11M1D14M2I10M1D24M6I107M2I12M2D69M 175/247 70.9% 257/94230402 0.0% 14/247 5.7% 113714316 76500239 +3491 chr4 + 190214555 146221719 146221718 146221801 83 CGTGGTGGTGCGTGCCTGTACTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCCTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......::.--....x.:.........:..:........x.xx.x...x.:.:.........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 70188522 NA +14996 chr4 + 190214555 146222345 146222344 146222586 242 TTTTTGTTGCAGTGACAGTGAGAAGCAGTCGTGATTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGGGGACATTAAGTTCCTGTAAGAG chr4 + 94230402 32503871 32503870 32504112 32503871 32503870 32504112 242 TTTGTCTTGCAGTGACAGTGAGGAGCAGCCGGGATTTCATGGGCTTTTTGCTTCAAGCTCGCAAAGTGTCTAATGATGAAACTGCTGGCACGTTTGTCTTCATTCCTCCTGGCTCCAAGCTGCTGTCTTGCTTTGAAGATGGTGATACTGTCACCCACTCGGACAAGTCCCTGAAGAGAAACCTGTCCTTTGTATGGAAAGCGCCAGACCAACCCATTGGAGACATCAAATTTTTGTAAGAG ...x.x................:.....:..x...........x...:.x.....:.....x.:......::..x..x...::........x..:..::...........x::.....:...x..x....:...x....x.x....:.x...........x..........................x..:..:.....:..x....x...:..::.x..:.....:..:..::........ 242M 193/242 79.8% 242/94230402 0.0% 0/242 0.0% 113718474 76496081 +5428 chr4 + 190214555 146224431 146224430 146224552 122 TTCTCTTTCCCCAGTTTATCAGTAGTCCAGTCATATTTTGTTTACTGGGCAAGGATTGAATCATCTGTTGTGTCTCAACAGACACATAGCAGCGCCCATTCTGACGACCGCATGGAGCCCAG chr4 + 94230402 32505923 32505922 32506044 32505923 32505922 32506044 122 TTATCTTTTAACAGCATCTCTGTAGTCCAGTCATACTTTGTTTACTGGGCAAGGATCGAATCGGCCACCGTGGCTCAGCGAGGGCACAACGACACATCTGCTGGTGGCAGCAGGAAGGCCAG ..x.....:xx...:x.x..x..............:....................:.....:x.::::...x....:.:::x:..:.:.::.:.x:x.x...::.:.x...x.:..x.... 122M 83/122 68.0% 122/94230402 0.0% 0/122 0.0% 113718508 76496047 +12414 chr4 + 190214555 146230257 146230256 146231421 1165 CTCAGCTGGGAATTCTGCTTTGCCTGT-CAGCCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATTGCCACCAGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTGTGCACGTCAGGAAGATTGGGGAGAACAGTTTTGTTTTGGTTCAAGCAGAGTACAACTGGATCACTCCTTCTGTGGGTAGCAAGAAAACAGTCCTCTGAGAAGACTGT---CACCCCAGACCTCTCAGTGGCCCTCCTTG------------GGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA---ACTGATGAAGACAGGGACTCATTGTGCCT---CTGTCAATGTGCAGTTA-----GTGGAGGAACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTC-------CTGAGCTTTGTTGTCTTAACATCTGTAATTGGGCTTCCTTCTTTCTTTTTGCAATTAGACGTTCTGTTTGAAGACTTAAACTCAACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAA-------ATACTGTCCCTCCTTAGTGT-CTCATCTCTTCTAACT--CTTTGGGGAAAAAAAGTAATGTTGGGTTG---TGTCTCCTGCAAGAAAAAGAACTGCAGCTCTCACTTTGCCTTCCTAAACCACCCCCAAAGAAGTTTTCT--TTTCAAAACTGA---ATTCAACAACTTGCTAGAGTTCTGATTTGGATGACTAGGTGAATGCAAGGGTATTTGGTCTTC---TGGGCAACTCAGCAGCCTGGCAAATCCGCCATGGAA---ATTGATCCAAAGTCAGGAAAGTTTTTGAGAGCTTGATTGAACACATCTTCAGGAAAACATATACATGCAACACAAGGCCGTAAACACCAG-AGTGGGGTAAGAAA---GCCTTTTCATCAGGTGTAAATGGATCTGAGACCTC--CCATCCATTTACACTTGATGGAAACATTCGTGT-ATCCCAACAGCTAGCAGACATAGTGCCTTTTGCCAAAGGTCAGGCTGAAAAACATTATTATACCAGCATAGTTTGAAGAACAGTCTTTACTTGTCTTTTCAGGGAATATCAG-GAAGAAAGCTTCATGGATGAAGGTCATCT chr4 + 94230402 32510602 32510601 32511711 32510602 32510601 32511711 1110 CCCAACTCGGCATCCT-CCTCGTCTGCACGGCAGTGCTGGGGCTGGCCGCGGCAGCCGGCCTGCGCTTCGTCTGCGCCCGGTACTGCCACAAGAGGACAGAAGTGTCCTTCAGCGAGCCAGGCAACAACGTCATCGCTGTCAAAGAAAACGGAGAGATGATGCACTTCCGCAAGATCCGGGAGAACAGCTTCGTGCTGGTTCAAGCTGAGTACAACTGGATCAGCCCGTC---AGGCAGCGGGAAAA--------GGAGGATAATGTAAACATCGCGGTCCTTAGGGTAGTGCCGCATAGCTGAGCCAGCCGCCCCTGTAGA------TGAAGACGGCTGAGCTACATGTAATACAGACTCTAGAAGGCAGTG-------GTGTCTTTGCTGCCTATAGGCAGGCATACAGGTGTACAAACCCGATGCAGCTAGC-----TCAGCTAGATGTGTTAGTCAAAGTATCCAAGCTACGGCTGCTAAGCG-----AACTAAAGTAACTGCT------------------GTTCTGTGTG-----TTACACGTACCGCAATTAATATTGTAT-ATCTGCTCATTAACT--GCCATTGCAACCATTACTCTGCCTCTATTGCCTTAAGGCTGTAGCAAAAAAAAAAAAAAAGGAAATTCTTCCTCTGCACTGTGCTGTTGTCTCCTGTTTAACCTCAGCAAAGGCTTCCAGTGTTACATTTCCCTTTCCTTTGCAGGCACTAGA-----AACCCTTGGTTT-------------------AAAGCAGCTTTCTCATTTAGAAGCTTACAGGTTCAGGTCTGTGCACTTGCTACGTTTCAGATGACAAAATACTTGCCAGTAGATTTGAAGTTTCAACGGGAAAATAAGAAGC--AGTAACTCACTAGTAGAGAACATTGATCCACA---------------GAAGGCTGAATTG-----ATCTAAGGGAAA----------GAAACACAAGGTGGTAGAAACCAGTTTTGGGGGGAGAAACATGCCTCCTCATCAGGTGCAAATGGA-ATAAAACCTTTGCAATCCATTTGCACCTGATGAAGAAGCTTGTTTAAGCCTGACAGCCAGTGTTTACTTCGTCTTTTACTTCGAGTCAGTCCAGTTAAC---ACTCAGTTAACACACACTGAGAAATACCCTTCTCAGGTCACTTTGGAGGTCCCCAGCAAAGGCTGCCTGGTAAATTAACAGCATCT .:..:..x..x..:..-.:.:.:...:-.:..x::x.....xx.....x:...x..:.....x....x.x.x::.:...:...:......x..x:............:.....:.....x.x:xxx:.:.:::.:..::xx.:x:.x.::..x....:x:.....x..x.x.....:x..........:..:..x:..........x................x:..x..---:..:...::.....--------x...:.x.x...---..:.x.:.x...:xx:..:.:x.:x.x.:------------.x.....x...------:::.x.x:..x...x..xxx:x....---...xxx....:...x.-------...:..---...:.x..:x....x:.-----...x.x:......:x:x..xxx:.-----...:.x:::x.x....x..-------.::....x:.x:xx..x.:.:-----..:.:::x.xx..x..------------------.......x..-----...x..x:.x.:....x..........-.:.:...........--:..x:..:::...:..xx..x.....:...:xx.....xx.:x::.:...x....-------.x.:.x.:....:x:.x...-..xx.x...:..:x:.--.:.::.x:..::xxxx:.:....:x:..x---.x..:::....:.x.xx...-----.:.:..::x...-------------------....x..:.....--...x:..:..x.---:....:xxx:x...xxxx.:.x:.x..::......x.::.:xx...x..x:x.....:xx..:---:...x..x.x..x...--:.:..x..xx:x:.:..:---.........x.---------------..::...x:....-----....xx:.....----------.x.........:x...:.x.....-xx.....x:.....---....::..........:.......-x.:.:....:--.x........:...:.....:.:.x::.:..x.-.x..::.....:..::xx:.:xx:.:.....:.:xx::.....x.:::xx...---.:.xx:::.:..:.xx:...::..:.x:...:x.xx...x:..::.:.:x:x:...-:...:xx..:.x:.::..x..x:x..... 16M1D10M1I202M3D14M8D12M3I29M12I11M6D26M3I16M7D6M3I17M5I24M5D19M7I21M5D16M18D10M5D27M1D15M2D55M7I20M1I16M2I29M3I20M5D12M19D13M2I12M3I63M3I16M2D18M3I11M15D13M5D12M10D24M1I14M3I24M1D10M2I33M1I53M3D56M1I29M 652/1044 62.5% 1110/94230402 0.0% 187/1044 17.9% 113719655 76494900 +17298 chr4 + 190214555 146236829 146236828 146237469 641 ATTTCCTTCCTTCAGATGGCATCTTGGGAGCA-TCGTCCCCCCTCACCTGATGATAGATGTCTTCTGCAAAGTGTTTTGTTGCTTTATATAGGAAAGAGGGTGCCTGGAAATACATTCTATTGGATATTAAAGACTGTATTTCCCTGATTTATTGTC-----AAGCTACGCATGGTTGTCTGAG--AGGCAAGGAACCAATGGG-ATATACATTTTGACTAATGATTAATTATTATATCG-AAAGTGATATTTTCCTATCAACTGATAGGCAGGA---AAAATAGACTAGAGCTTGCTAGGTTAGCACCATGGGTCACAGATGTTGCCTCTGCATTTTCAGATTATATTATCCATTACAGGCGGC-ACCTTCTCATTTAAAAATATAATTTGTTGTTCTCCCAGACGAAAAAAGAAGCTGACATTTCACATGCAAGCCAAAGATTAGAATCACTGCACAGGGCCGCATATGGAAGTACATTAGGATGTGGTGTCCCTGAATCAAGGACACCAGGCGGCCAGTGCTGGGAGAGATGTAGAAGGCAGTGACTT-CTGATCTTTATTATGCAAATGTGCAGCCC-CCGAGCCAGGCTGTTTAACCTCATCAGGGGAAATGTCGCTGATCATTTCAAGCTCCAAATGTAGCACAAGCATTA chr4 + 94230402 32515215 32515214 32515856 32515215 32515214 32515856 642 ATTTTCCCCCTTCATATCTCATTGCAGAAGCACTCTGTTCTCATTAGCATGTGCGTGACTCTCCCAGTAAGGCATTTTGTTATATGATGTATGAAGGATCATGTCTCACACCACATTTTACTGTATATTTAAGTGCATGTTTTGCTGATTTACTGCTGTTGTAGAGAACGTCTCCTTCTCTTAGCAGGGCAGGTCCACAACGGATGTATCAGCTCTGACTAATGATTA-TTAGCACATCCCAAGGTTATGTACTACAATCAAATAACGTGCAGGAGGGAAAAGAGACTCCAGCTTACTGGGCTAAGGACAAAGATCACAGCTA--GTCTCTGAATCTTCAGATTGCAATATCCATTACAGATTGCCACCTTCTAATGTCAAAGAATAATTTGTTGTTC---------AGAAAATGTGTTGCTATTTCAAAGGCAAGTCAAAGATCAGACTCGCTGTATAT--CAGTGTGCTGATGTACATTAGGAAGTGATGTCCAGGTACCAAGGACATTATGCTGTCGGTACAGAGGGAAAGACAGAAGAC-GTGACTCGCTGATCTACATTATGCAAACACATGGCCCAAAGTGGAAAAATATTTAACCCAGTCAAGTAAAATGTCACCAGTAATTCCCAGTGCTTAATGTAGCACAAACACTA ....:.::......x..xx...:x::.:....-..xx::.:.x.:.x.xx:..xxx..:x::::.x.:..:.::.......::x.x..:..x...:..xx:..:..x:x.x:.....:..:..x.....x...xx::.:...:x........:..::-----.::xx...:x.xx..x...x..--:....:.xxxx...:..:-:...xx::.:.............-...x:.:...x-..:..x..:.x:.x.x.....x.:.::x......---....x.....xx.....:..:..:..:x:x..x:.:......x.:--.:.....x..:........::.x............::x..-.......x..x.x...:x..............---------.:....x:x.:..x:......x.x.....:.......:...x..:...:.:.x--.x.::.::x..x...........x...:.....xx.x.:........::.x..x.:.:..:.x.:.:..:.x::.....:.-......:-.......x:..........::::::....-xx.x.xx.::x.:.......:x:...:.x:.......:.:::.x...:.x..:x.:x............:..:.. 32M1I124M5I22M2I18M1I23M1D11M1I34M3I45M2D40M1I32M9D53M2D81M1D7M1I29M1I75M 410/626 65.5% 642/94230402 0.0% 31/626 5.0% 113721614 76492941 +3646 chr4 + 190214555 146238702 146238701 146238874 173 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG----TGA-GCCA---AGAT-TGTGCC-----ACTGCTCTCCAGCCTGGGTGACAG-AGCGAGATT------------CTGTCTAAAAAAAAAAAAAAAGTTTGTACATAATTAGGCC chr4 + 94230402 76033197 76033196 76033389 76033197 76033196 76033389 193 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCAT-GGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGACAGCGGGTCTG---ATAGTTAGGTC ..::....--...:.x......:.........::::........x.xx.x...x::........::.:..x.xx:..:..:..----...-....---....-......-----x......-.....x.-......x.-..x...x..------------......:.::.:.:.x.:x::..:..---...:.....:. 8M2D73M4I3M1I4M3I4M1I6M5I7M1D7M1D8M1I9M12I26M3D11M 123/166 74.1% 193/94230402 0.0% 34/166 20.5% 70205505 NA +18058 chr4 + 190214555 146255823 146255822 146256538 716 ATTTCACTCATAATTCAAACATTCAGACCCTTTCTTTGAAGCAGCTTATAATAAATTTAAGACATATAAC--CACAATCTCTCATAATGGGAGTGAGGAATTTCTGTGTGGAAACTATT-----TGAAGGAATGTCTTTAAAAATGATGTCAAGGAATGCATATATCTTACGCTTTTCAGCATCTATTCGATCTATGACCCC-TGCTGAGT----------TGATAAGGAAGAGGCATGTCACAGTCGTAGAAA----------AAAAGAATCACACAGTAAATCAAAGTATGCATGAATAAGA---CTTTGGAAATTTTCACT---------GTCATCAGAAGGGCATTTTCCTGATGGTGTGACCTCATTTCAAACA-TTACAGTAACTACTATAGGGTTGTATTGCACAAAGGTGCTGCAGGGAAAGCATGTTTGCTTTTTGTCACTTACCATGACTGATTCCTGCATTAGGAAAGCAAAATT-----AACCCCCAAATATTGTACCA-CCCCTGGCAGTAATCAACAAAGCATATTTTGGAAATAACGCTCTTGTCAAA--TACATTT-TAAGGCACTTAAACAGGATCTC------------ATATTTTTGTGTAAAAAAATAAAATATGCATTGAGGCAACATTCACAAGTA-CAAGTCTTCAGAATTGCTAGTATGTACAATCCTGTACATATATACATTGCTACAGAAA----GTCCACCTCCTTTGTTATACTGTCG---------------GCCTTGTCAGCTTCACTCCCTACAAGGAAGGAAAACA chr4 + 94230402 32525008 32525007 32525783 32525008 32525007 32525783 776 ACTTCACTCATAACCCAAGCAC-CAGATCGGTTCTTTGAAGAAGCTTATGAGGCATTTAAGATATACAATGGCACAATATCATACAATGGAATTGAAAGAATTTTCTTGAGAAACCATTAACTTTGAAGGAATGTCTAGACAACTG-TGTCAACAAATGCAAATAATTCATGCTTCTCAGCTTCTATCCAATGGATGGCCCCATGCTGAGTATACACAAACTGAGAAGAAAAAGGCATGTCACAGTCATATGACTAGGGAGTGTAACAGAATCACACAAAAATTCAAGTCAGTCTTGAAAAAAAACCCTTCAGAAAGCTCTTCTCCAGGGCAAGCCAGCAGTAGGATAGGCTACTGGT----------CATTTTGGCTACTTACAGCTGGTGCACCCTGGCTTCAAAGCA----GGGGCAATGGAAGAAACACAGCTGTTACTCATGACCT-CTTCATTTCATTCC---GTTAGAAAAATAAAAACTAAAGAACTTCAAAATACTGTACAAACCTTTTGCAGCAGCCAACAAAGTGGCTTCTGGAATCAACGCTTTTGCCAAAAATGCATCTGTAAGGCACTTAACGGGTATCTTTtatatatatatatatatgtatatataAAAATAAAATATGCACTGAAGCAACATTCACAAATACCCAGTTGTCTCGATCATCTGTGTGTACAGTATAGTACATATATACATT--CACTGTGACACCGGCCGTCTCCAGCATTATACCTTCACGGGTACTTTGGGTTGCCTTGTTAACTTCAGTGCCTGTGAACATAAAAAATA .:...........::...:..:-....:.xx..........x.......:.x:x........:...:..:--......x..x:.:.....:.x...:::.x..:.x.xx:.....:...-----.............xx.x..x..-......x:......x...x:.:.:....:.....x.....:.:..xx...:....-........----------...x...:..:...............:..x:.x----------..x...........:x..x....:x:.xx.x....x..:.---...::....x:.::x..---------.:..x...x...::.xx:.x...:.----------.....:::x:.-......:x:x.:.xx:xx..:.x:.xx...----..x..x:::.:::..:..::x:..:.x:.::.x..:.-.:x::x:.x.....---:....:...::....x:-----...::.x.....:.....x.-..::.x....:.::........::xx..:.....x:......:...:....--.:...:.-............xx:.x....:------------....x.x.:.:..x................:...:.............:..-.x...:x..xx:..::::x..:......:.x:x...............--:..x.x:.----.x..::....xx::......:x..:---------------.......:.:.....x.x...:::.:x.x::....:. 22M1D47M2I47M5I22M1D55M1I8M10I33M10I40M3I17M9I25M10D11M1I30M4D37M1D14M3D17M5I20M1I51M2I7M1I22M12I51M1I48M2D8M4I25M15I37M 477/694 68.7% 776/94230402 0.0% 104/694 15.0% 113730815 76483740 +9949 chr4 + 190214555 146258687 146258686 146258861 175 CTCACCTTCTGCCTTGATACCATCCAAGACTTGATTGTTGGCACCAACACACTTCCCAGAAGGATCTGAGCTGGGTGGTAGATGAGCAAGGGTACAGATATTAAAGAGAGATGCTCATGGCCTGCAAACACGATCTTCAGCATCGGAATTCCTGTTGAACAAAGAAGACAGAAAA chr4 + 94230402 32529091 32529090 32529263 32529091 32529090 32529263 173 CTTACCTTTTGCCTAGAAACCATCCAAGATTTTATTGTTGGTACCAAAAGACTGCCAAGAAGAATCTGAGCGGGATGATAGATGAGTAAGGGGACGGAAATTAAGGATAAGTGCTCGTAACCTGCAAATACTATCTTCAGCATTGGAATCCCTGC--AAGCAGAAAAACAGGAGA ..:.....:.....x..x...........:..x........:.....x.x...x..x.....:........x..:..:........:.....x..:..x.....:..x.::.....:.::........:..x...........:.....:....:--..xx.::..:....:.:. 155M2D18M 135/173 78.0% 173/94230402 0.0% 2/173 1.2% 113729596 76484959 +6374 chr4 + 190214555 146261946 146261945 146262045 100 TTTCAGACAATGCAT-GTCTGAAAGATGCTAGAAGGCCCATATTGTAAATGGATTCTTTTTCTGAC-----TAACTTCCACCAAAAGCATTTCCCCCACTGCTCTA chr4 + 94230402 32534770 32534769 32534874 32534770 32534769 32534874 105 TTTAATACAATGCATTGTCTGAAAGATGTTAGGAGGCACATATTGTAAATGGATTCTTTTTCTGACTAAAGTAATTTCTACCAAAAGCCTTT-CCCCACTGCTATA ...x.x.........-............:...:....x............................-----...:...:.........x...-..........x.. 15M1I50M5I21M1D13M 90/99 90.9% 105/94230402 0.0% 7/99 7.1% 113727176 76487379 +58510 chr4 + 190214555 146263474 146263473 146264432 959 GTTAATTAGAAAAAAAAAGTAATAATTAAAAAACCCAAACAAACTTACTAGAAAGAGTTTTCCTTTTAAAGTAAAATTTAAATATAGGACTCTTTTCATCTTGCTATCACTGCGGTAATATAAATGAAGCAAATTAATTTTAATGCTCCCAGGTACTGATTCTGTGTCACCATGGTTGACAGGATTCAACTAGACTTTATGAGATGGCATTTGACTTTATGGAAGTGAACACTATGCACGCATTTACAATTTTACAGGGACTTTAAGCTGTCATGCTGAAAAATGTTTATAAAACATTAATCAAAAAATGCCTCTTTAATACAATGCATTGTCTGAAAGATGTTAGAAGGCACATATTGTAAATGGATTCTTTTTCTGACTAAAGTAATTTCCACCAAAAGCATTTCCCCATTGCTCTACAAGTACACTGTGTGGATAGATAAAGAGCACTTTCTCAGCACATTACTACCTGATCCAAACACTTGGGAAATCACTAATGTACAGCATGCCATATTTCCATGTCACACATGACACATTTGTCTAAAATTATCCAACAGAGTTTGACACTGCAGCATATTCCATAAGCAGAGCTTTCAACTGACATCTGCCAAGTAGCAACTTCAAGTAAGAGCTTTCTTCCTCTAACAAGCAAGTAAGGATTTTCTTTTATCCTATACCCAGGATGGAAAGGATAAAACAATATGTACAAGAA--CAAGTTTTTTTTCTATTTTAAATATGTTTATTTTATGTTCTCTGAATTAAAAAATTCCCTTTGTATCAGTGTTCAAGCTTCAATAATAACTACTTTCTATTGGATGGACAGTTTTTTATTTTTCCTTGAGA----AACAG-ACATTTTTCTTCTTAGATTAAATATGGACTTTTATTTAACTTCCACTGAAGGCTGCTCTATTGTTCACAACATAAAATGATCTACTT---TACATTATTGTTCAGAGCTTACTT chr4 + 94230402 32534471 32534470 32535395 32534471 32534470 32535395 925 GTTAACTGTAAAATAA---TAATAATGAAAATCCTAAAACAT-----CTGAAAATATTTTTT-------AGGAGAATTTAAATATAGGACTCTTTTCATCTAGCTATCACAGCAGTAATATAAATGAAGCAAATTAATTTTAATGCTCCAAGGTACTGATTCTGTGTCACTGTCACTGATGGGATCCAGCCAGACTTTATGAGATGGCATTTGACTTTATGGAAGTGAGCACTATGCACGCATTTACAATTTTACAGGGACTTTAAGCTGTCATGCTGAAAAATGTTTATAAAACATTAATCAAAAAATGCCTCTTTAATACAATGCATTGTCTGAAAGATGTTAGGAGGCACATATTGTAAATGGATTCTTTTTCTGACTAAAGTAATTTCTACCAAAAGCCTTTCCCCACTGCTATACAAGTACACAGTGTGGAAAGATAAAGAGCACTTTCTCAGCACATTACTACCTGATTCAAACACTTGGGAAATCACTAATGTACAGCATGCCATATTTCCATGTCACACATGACACATTTGTCTAAAATTACCCAACAGAGTTTGACATTGCAGCATATTCCAT-AGCAGAGCTTTCAACTGACATCTGCCAAGTAAGAACTTCAAGTAAGAGCTTTCTTCTTCTAACAAGCAAGTAAGAGTTTTCTTTTATCCTATACCCATGATGGAAGTGATAAAACAATAAGTACTGGAAATCAGCTTTTTTTTCTATTTT-AATATGTTTATTTTATGCTCACTGAATGTGTAAGCTCCCCTCAAAGCAGTGT------TTCATCATTTGTTGTTTTCTATCACATTGCAATGGGTTCA---------GAGAACTTAATAGAACATTTTTATTACCA-CCGAAACATAGGCCATTATCT--CTCACACCCAGAGCAGAATTATTGCT---------AGATGCTCTACTTACATACTTTACTGTATAGATTTTTCCT .....:.:x....x..---.......x....xx.:x.....x-----..::...x.x....:-------..x.:...........................x........x..:...................................x....................::.x::...::....:..:.:.....................................:.....................................................................................................................:.............................................:.........x........:....x...........x.......x.....................................:..........................................................................:................:...............-...............................:x.......................:.................::.....................x.......:x............x....x:...--..:x...............-.................:..x......xx:x..::....:.::x.x......------....x:.x.x::.::.......::x..x.xx.xxxx..:.---------....----..:..-........x..x::.-x:x...:..:.:.:x....:.--..:x...:x.::..x.xx:.....:.---------.:...x.......---...x...:...x:...x:..x.:. 16M3D23M5D15M7D513M1D129M2I19M1D52M6D40M9D4M4I5M1I15M1D21M2D26M9D13M3I24M 793/915 86.7% 925/94230402 0.0% 54/915 5.9% 113729003 76485552 +3742 chr4 + 190214555 146263681 146263680 146263817 137 CATTTGACTTTATGGAAGTGAAC---ACTATGCACGCAT----------TTACAATTTTACAGGGACTTTAAGCTGTCATGCTGAAAAATGTTTATAAAACATTAATCAAAAAATGCCTCTTTAATACAATGCATTGTCTGAAAGATGTT chr4 + 94230402 62383079 62383078 62383228 62383079 62383078 62383228 150 CATGTGAATTTTCAGAAATGAATTGTAATATGAATGCATAGGGACTTTTTCATAGTTTTACAGTACTTTCAGATTTCTCAGATGAAAAATGTTTTTAAAGCATTAGATAATACACACCTTTGTAAAAATATGTCTTGGCTGTAGGATTTT ...x...x...x::...:....:---.x....x.:....----------.:.:.:........x:x:..:.:::.x::xx.x............x....:.....:x:..x.x.::...:.x...x.xx...:x...x...x.:...x.. 23M3I13M10I101M 90/137 65.7% 150/94230402 0.0% 13/137 9.5% 83880602 NA +8219 chr4 + 190214555 146269083 146269082 146269353 271 TAACCCCATCACTTTGCTGAAAGTTTTATGTAAATAAA-------GATGCAAGAAAAGACCAAAATGAGCAGCTGGTGTTGCTTCTGTTTTGAAACAGGTATGTTGTGATTGGAAAAGATGTTTAATGAATGGCCTGAGCCGACTCACCAGGTGCTGACAATGAAAGATTTAACTCTACCAATTGAAGGTTTCTGCCTCAGAAGATCAGGTACACCCTCACCTGTCTGACAGCATTGTAGGAGTAACTAGCAAACAGGGAATTCAAGAATGAATTAAA chr4 + 94230402 32537755 32537754 32538015 32537755 32537754 32538015 261 TGACTCCATCA---------AACTTTTAAGTAAATAAACGTGAAGGATGGAAGAGAA----AGAAAGCACAGTTTGTCTATTTCTGGGGTTTCAACA--TGTGTTCAGATTGGAAGCGATGTTTAATGAACAACATAGGCAATCTTACCAGCTGCTAACAATGAAACATTTAACACCAACAACAGAAGACTAGATCCTCAG--GCTCCAGAACATCTCCACCCACCTGACAACATGGTAGTAATCATTAGTTAGCAGGGAACATGAGAAGGAATTGAA .:..:......---------..x.....x.........-------....x....:..----.:..x.x:...:.x..x.xx:.::x.xx..xx....--.:....xx........:x.............:::.x.::..x:x..:.....x....:.........x.......x.:.x...:x....::.xxxx......--.x..x:.x...:.::....:::......:...x....x.:.x.:...:x.:.......:x::....x.....:.. 11M9D18M7I12M4D36M2D102M2D75M 177/254 69.7% 261/94230402 0.0% 24/254 9.4% 113731328 76483227 +24334 chr4 + 190214555 146272270 146272269 146273014 745 CAGCTTCGGTACAGATGACATTCCAAA--TCAGCTGGCTTCCTGGGGCCCAGGAATCTTTTGAGTTGTGTCCAATTTTATATCTCCTCCTGCCCCTAGGGTAACTTGTCAAAAACCTACTGGGTACCCCATAGCTTGAAAAAGTGGGTAG-CTAACTTTAATTTCTGGCTGGAGTTGTTTGGATGGGGCTGTAAATGGGGACATACAAGGGGAAACTGTTACCCTTGCTTTGCAGCTG--TAGGCTCATGTATTCTTT--------ACTGCAAAGAAGCATGGAGCGGGCTGTCATTAAAGACACTCAACCTGGTTTCTAGTGTCTGGTTCAATTAAGAGAACTTCTAGGAAGAGACATGACCAAATAAATAATTGGAGAGATGCAACTCTGAAAGGACAATTGTTTTTTATCGATCTCTGTTTGCAAGTTGAAATTGAGAGATACAAACTTTAAGTGGATGGGCTCTCCTGGGTGAGAGTCTTCACTTCAAACGCAGTAAATGAGTGTTGTTTTGTGATGCACATTTTAGTACTGCTAGAGGTAAACTTTCTAAATATTAATAATAATAATAAACAAATCCCTCTGCAACTGACAGCGAGTGCACAGATGAACAGGGATTTCCAGGAAACAGGCTGTTCTGGTCTTCTGGATGTGGCAAAGTCTTCATCAGAAGGGACAAGC--TCCAGAAC--AACAGAAAGTGTGCCCCTCA--TTACTTTGGAATTCCCCTTTCAGGAG-CACTGAGGGCATGTGAGTTGA chr4 + 94230402 32539126 32539125 32539845 32539126 32539125 32539845 720 CAGTTTTAGTATGGGTGACACTTGTAGCCTCTGCCAGCTTGAGGTAAAAAAAAAAATTCTTGAGTCATGTCCAAACATGGATCTTC-------CCAAGGGTAACCTGTCAGCTGTCTGCTGAGTATAATGTAGTTTTTAAAAGTAGATAAATTAACTTTAACT----------GTTTTTTGG-TGGGG-----AAGGAGGGTTGAGAGGGCTCTAGTGTCATTATCATTTTACAGATGGGTATGTGCGtttattttttttttaattattataaaGAGGTATG-AGCTCGCTGTCATTAAAAACCTGCAATCTGGTTTTTAGTGTCTGATCCAATTATGTGTACATCTGGGAAGACACACAACCAAATAAATAATTGGAGAGGTGCAACTCTGAAATGACAATTGTTATTCATCGATCTTTTTCTGTAAGTCGAGATTGAGAGATGTAAACTTCAAGTGAATGAGATCTCCTGGGTGAGATTCTGCAGTTCAAACACAGTAAACAACTGTTGTCCTCTGATGCACATTTTAGTACTGCTGGAGGCAAACTTTCTAAATATTAATAAAAA--------------CCCTACTACTGGCAGAGTATACACAGATGAAAAGGAA--GCCTGGGAGC---CAGTGCAGAATTTCTAGCCGCATTCAAAGTCTAATCA-AAGAAACATACATTTCAGGTCAGAACAGATAGGAGATTCCCTAATTTTCTCCAGTATTTCCCCTTCTGAAATCACAGAGAG-ATAAAAATTGA ...:..::...::.:.....:.:xx.:--..x..::....xxx.x::xxx.::..x:.:......::.......x:x.:x....:.-------..x........:.....:xx::..:...:...:xx::...:..xx......:.:..:-:.........:.----------...x.....-.....-----..x.:..::xx.x.:..xxxx.x...:.::x.:::...:...x..--..x.:x.:.x....:...--------.:.::.....:.:...-...xx............:..x:x...:.......:.........:.:......x.x.x..x...:......x...::.....................:.............x..........x..:........:.x.:..:....:..:..........::......:.....:...:.x..............x...x..x.......:.......::.x......::.x......................:....:.....................x..--------------.:..:.x....:...x.x:.:..........x...:.--x..x..:.:.---.x..x.x.:x:....:.x:.::x:x..:x::.x....-...::...x:.--.:...:x.--......x..x:x:::..::.--..x..:::.x...:...:...x.:.:-...x...:.-..:x:.:.... 27M2I57M7D57M1I12M10D9M1D5M5D45M2I18M8I16M1D285M14D37M2D10M3D37M1D11M2I8M2I20M2I26M1I9M1D11M 496/700 70.9% 720/94230402 0.0% 65/700 9.3% 113733144 76481411 +21123 chr4 + 190214555 146279587 146279586 146279986 400 CTTGACAAAATATAAAATTACCTCCAACCCTGAGCTGAAACTATAGGAGAGCAGCAAACAAGCCCTGTAGTATTGTTTTAGATGAAGCACAGTGATAGCTCTGCACTTCCTTCAGGCCTCCTCT-TTCTTCCTGAACGAACTCCAGGGAATGGCATCATGTCAGGCTTTCCAGATGGATTATGTGAAGCCATAGCTCAATGTCATTTTCAATAGGAAGCCTTATAATTAAAGGTCAAATAGTCACTTCATCTGCAATCAATCAATAGAAAAAGTACTAATACGAAGAACTAATCAATCAATGGCAAATGCACTAATAAAAGCAATGAATCAAAT---TCAGCATGTGTGTAGATGCAAGTACAAGGAAGAGATCGAGATAGGGCAAAAGCAAGAACAATAAAAT chr4 + 94230402 32541560 32541559 32541962 32541560 32541559 32541962 403 CTTAATTACGCAAAAAACAACATTCTGTACTCAGTTGCAACTTTTGTGCAAGTCCAAGCAACAACTGCACTATT-TTTTAGATGAGCCTCACTGATAGCTTTTCACTTCCTTGAGGCCTCTTCTCTTCTTACTGAATGAACTCCAGGGAATGGCATTATGTCGGGCTCTCCAGATGGATTATGTGAAGCCATAGCTCAATGTCATTTTCAATAGCAAGGCTCATAATTAAAGGTCAAATAGTCACTTCATCTGCAATCAATCAGTAGAAGAAGTACTAATACTAAGTACTAATCAATCAATGGCAAATGCACTAATAAAAGCCATGCATCAAATGTCTGCGTATGTGTGCGCTCACATGTACTGTGCATATATGTGAGTAGGGAGGAGAGAAAGAGAACAAAGT ...:.:x.x::.x....:x..x.:.x::x..x..:..x....x.x.x:x.:xxx...:...xxx...:.x....-..........:x.x..x........:.x.........x.......:...-.....x.....:...................:.....:....:..............................................x...x..:.........................................:.....:............x...x...................................x...x.......---.xx.:.......::xx::..x....x:x.x.x.x..xx:::.....x::.::x..::.x..:...:. 74M1D49M1I209M3I67M 312/399 78.2% 403/94230402 0.0% 5/399 1.3% 113738027 76476528 +11058 chr4 + 190214555 146283186 146283185 146283449 264 ACTTACCCAATGTAAGGGATTTGTGTGTAGAACAGAAAATGATAGCCACTGTGTCTGCTGGTGTGAAACCCGAATTATTCCTAGGGGCAAAAAAAGATTTTGACAAATACTTTTATAAAAAGCCAAT-TTAACACATTCAAAATCAAATGTAGTAC---------CTACCTTTATGTTAACATCCCTTTGATCAATCCTGGTGACAGTAGTAATTCTACACCCAAATGTACAGAAGTGTCTGGATTTCTTTTTAG--AGAACTACTTCTGAGTCAT chr4 + 94230402 32545239 32545238 32545503 32545239 32545238 32545503 265 ACTTACCCAGGGTGAGAGATTTGTGTGTGGAACAAAAAATGATAGCCACTGTGTCCGCTGGTGTGAAACCAGAGTTACTCCTAG----AAAAAAAAGTTTTAATAACCTCTATTAGAAAAAAAAACTCTTAAAACATCATTGATCAAATGCATTACTTTGAGGATCCATATGCATATTCACATCCCTTTGATCAGCGCTAGTGACAGAAATAAT-----ACACAAATGAATGGTAGCGTTT--ATTTATTTTTAAGCAGAGTTGTTTCTCAGTTGT .........:x..:..:...........:.....:....................:..............x..:...:......----.......::....:.:..x:x..x...x.....:xx.x.-....x....:xxx:........:.x...---------.:.:x.x:..:..x...............::x..:.......x.:....-----..x......x.::.x..:..:.--....x......:--...::.::....x...::. 84M4D39M1I28M9I49M5D22M2D12M2I19M 193/253 76.3% 265/94230402 0.0% 23/253 9.1% 113737947 76476608 +3036 chr4 + 190214555 146290200 146290199 146290253 54 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::........x.xx.x...xx:.x.........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 70256989 NA +5034 chr4 + 190214555 146292925 146292924 146293026 102 TTACCTTGTTGAAAAGATGAAAGTTAAAAGCATAAAACTCAGCTGGATAGAAAATACTG-AAGAAAAAAAGATTGAATCTAAATTAGCACTCTAAAAGCAGTA chr4 + 94230402 32546836 32546835 32546935 32546836 32546835 32546935 100 TTACCTTGTAGAGAAGAGGAAAGTCAAAAACATGAAGCTCATCTGAACAGAAAATACTGAAAGAGAAACAAGTTGAAATTAGACTTGCA---TCACAGCAGTA .........x..:....x......:....:...:..:....x...:.:...........-....:...x.::.....x:..:.:.x...---.x.x....... 59M1I29M3D11M 78/99 78.8% 100/94230402 0.0% 4/99 4.0% 113746089 76468466 +66378 chr4 + 190214555 146293924 146293923 146294796 873 ACTTACTTATGAACAGTATGAGAACAAGGCTGAATTTATCCAGGTCAATATTTGGGTTAGAGAACGTGTCACAGAATGTTGTGTAGATGATCATGAGGAGTACACTGCTGCTGATAGCACCAAAAGGAGGCTTCTTTCTCTCAAGCCAATCCTTGATGTATCTTCGGACAATCTGAAATACAGAGATCAACAGGTTGCCTCTTTTCAGAGATGGAGGGAGTTGAAATGGGCATCACAAAGTGATTCTGACAGGAGAAAGACATAAAGGAAAGAGAATAATTTGGCTGATGGCCACAGTGGATTTCAAAGCTTCCCTGCCACACTACTCTTCTTCTGGGGAATTTAACATTTGTAGTGCAACTTCCACTGGGTGTCCATAATGAGAGTATATTTTCAACTGCATTCAAATCCATCCTTAATCATGCCAAATGCTCTTTGCTAGCTGTCACTGAGACATGCCCATTAAACCTCCCCAAAGTTTATCTCCTCTGCTGATCCTAATGGATGTGTGTAATTATCACAGTCCCCTTTGCCTCAACAGACAATTCCAAGTGCAACTTTGGGAATCTTAAAAATCTGACATCTTCAAGAATTTCAAGACAGTAGATAATCGAAAGTGATCCATGGAACATATTAATATTTAAAACGCTAGCAATGCACCAGAAGTTTTTAATTAAATTATAACTCATGCTTGAAAAGCAAAAGTGCATGTGTTGTGGGAGTTTAAATAATTCAAACTCTGAATATCTAGAGTTTTTGTGAATCCAAAGACAAATGCCATTTGCATACTTTTAGAATTCCAGAATTAACATTTAAAAATGAATAAACCTGT---------CCTAACTCT----CCTACAAAAGGATCAGTGAAATATAAAGTTAT chr4 + 94230402 32549881 32549880 32550761 32549881 32549880 32550761 881 ACTTACTTATAAAAACTATTATAATCAAGCTGAACTTATCAAGGTCAATATTTGGATTGGCAAAAGTATCACAGAACGTAGTGTAGATGATCATCAGGAGCACACAGCTGCTGATAGTGCCAAATGGAGGCTTCCTCCTTTCAAGCCAGTCCTTGATGTATCTTCGGACAATCTGAAACACAGAAATCAACAGGTTGCCTCTTTTCAAAGATGCAGGGAGCCAACTTGGGCATCACAAAGTGAATCTGACAGCAGAAAGACACAAAGAGAAGAGAGTAATTTGGATGACGGCCACAGTGGATTTCAAAGCTTCCCTGCCACACAACTCTTCTTCTGGGGAATTTAACATTTGTACTGCAACTTCCACTGGGCGTCCATAATGAGAGTATATTTTCAAGTACATTCAAATCCATCCTTAATCATGCCAAATGTTCTTTGCTAGCTGTCACTGAGACATGCCCATTAAGCCTCCCCAAAGTTTATCTCCTCTGCTGATACTAATGGATGTATGTAATTATCACAGTCCCCTTTGCATCAACAGACAATTCCAAGTGCAACTTTGGGAATCTTAAAAATCTGACATCTTCAGGAATTTTAGGACAGTAGATAATCGAAAGTGATCCATGGAACATTTTAATATTTAAATAGCCAGCGATGCACCAGAAGTTTTTAATTAAATTATAACTCAAGCTTGAAAAGCAAAAGTGCATGTGTTGTGGGAGTTTAAATAATTCAAACTCTGAATATCTAGAGTTTCTGTAAATCCAAAGACAAATGCCATTTGCACGCTTTCAGAATACCAGAATTAACACATGAAAACAAGCAAACCTGCTGTACTTTGCCTAACTTTTGCACTTTCAGGA-----AATTAAATCTGAAGTTAT ..........:..x.x...x.x..:x.:......:.....x..............:..:.x:..x..:........:..x..............x.....:....x...........::.....x.........:.:..:........:.............................:.....:......................:.....x......:::.xx.................x........x.........:....::......:........x...:..................................x..............................x................:.........................x.:...............................:..................................:.............................x...........:........................x......................................................:......:.:..................................x............xx..:...:..................................x...................................................................:...:.........................::....:.....x............:x.:....::.::.......:---------.......:.----.:.x..::.-----.:.x....x.:....... 832M9I9M4I9M5D18M 781/868 90.0% 881/94230402 0.0% 18/868 2.1% 113744043 76470512 +13176 chr4 + 190214555 146298394 146298393 146298737 344 CTACTAGTATTAATAACACTAACTTCAACTTTAATGGAAGACT----AATATGAAAGGCCCATCTCAAACTG--AAACAAATCACTAATGGAAAGACCAGAGAATGCATGAATGATAATGTATAGATATGCTTTTTTATTATTAATTTATAGGGTAAAAAGTAGGTTTTAGTGTGCTGCTTT-AAAAATATTCAAGGTGATGGAAAATAA--AAAG--TGGTAGAATTTCTGTTTCATT---GTTTATTTGTATACCACTCTTAAATATAATGCACAAAATAAGTATTTGTCACAAGCACTTAGATGTATTGAAAAG----GTTTGTTGGAAAAGAAGAGAAAATGCTATGACAGCCGGCAC chr4 + 94230402 32556466 32556465 32556823 32556466 32556465 32556823 358 CCACTAGAAT-GATAACATTAATTTTAGCTTTAGTTAAGGTCTGTTTAATATGAAGTGCCCACTTTACTCTGGCAGACAAATTACCAATGGGGCAACTAGAGAATGCATGAATGATAATGTACAGACAAGC-TTTTTATTATTTATTCATAGA--AAACAGTGGGTTTTGGTGTGCTGCTTTGAAAAATGTTCAAACTAGTAGAATATAATGAAAGCACAGTGAAAATTCTATTTCATTAACATTTAATCATAAATTGCTCTTTAATATAAAACATAAAATAAAAGTCTGTCATAAGCACTTAGGTGCAGAGAAGAGAGGAAGTCTTCAAAACGGGAAAGGAAATATTGCAGTGGCTTTCAC .:.....x..-:......:...:..:.:.....:.x:.:.x..----........:x.....::.:.xx...--.:......:..:.....::x:..:........................:...:.x..-...........x...:....:--...x...:......:............-......:.....:x.::.:...x....--....--::..::..x....:.......---:....x.::..x.:::.....x.......x:..:.......:x:.:.....:..........:..:.xx...:..----:x.:x.:::..x:.:.:..:....::.::::::..:xx... 10M1D32M4I25M2I57M1D21M2D27M1I27M2I4M2I21M3I75M4I41M 246/340 72.4% 358/94230402 0.0% 22/340 6.5% 113741928 76472627 +7496 chr4 + 190214555 146305896 146305895 146306124 229 GAAAAGATCAGATAGAATTGGAGGCCTTACCTGTCCAATGATGAGAGGAACCACAACAGTCATAAAAAGCTGAGAAAAAATAGATGTGAAAGGCACAGAAGAAGATGAACCAAGCTGTAAAACAAGAAAATAGGAGTTAGAATTACTTCAAATCAGTTATCAAGCATTAGTGTTTATAAATAATGCA-ATAAATAGA-TTTTCTCAGGCGCACCAAAAATTTGGTAGCTAT chr4 + 94230402 32560100 32560099 32560316 32560100 32560099 32560316 217 GAAATGAGGATGTATATTTAAAAGACATACCTGTCCAATAATAAGGGGGACTACAACAGTCATAAACAGCTGCGAGAATATAGATGTAAAAGGCACAGAGGAGGATGATCCAAGCTACAAAATAAAAATATGCCATTAATA-----TTCAACT---TTTTC-----TTTGTATATACAGTTATTGCACATTCATATACTTTTATTATATGCA-TAAAAACTTGGAAGCTGT ....x..xx.x:..x.x..::.:.x.x............:..:..:..:..:..............x.....x..:..x........:...........:..:.....x.......::....:..:..x..:xx.x.x.x.-----.....x.---..x..-----..x..:.x..:.:x..x....-..xx...x.-....x.:.x::...-:.....:....x....:. 141M5D7M3D5M5D21M1I9M1I14M1D18M 158/215 73.5% 217/94230402 0.0% 16/215 7.4% 113745796 76468759 +20428 chr4 + 190214555 146325917 146325916 146326830 914 TAGCTTTTAATAAAATATATTAAAGACAACATCAAAATACTCACAAAAAGCAGCAGGAGCAGGGGTGTTATAACGATGCCCTGAAAGAAA-TAAAAGAGAGGATGATCATTTATCAGCCTGGAAAGCAGGACACTTTCTTTGCCATTTTAAACTCTGAGGCATAGGAGTGCTTATCTTCTCACTGCTGTTTA-----ATAAAATCTAGGAGATAAAGAGGGGAGAGTCCCAATCTTAGCTTT-CTCTTCCATAATAACATCTCTATTACAATTATTTGTATTTGGCAGCCTGAAAGCACAACCACCAATCTG--------CCTTAG------GTTCATCTTTCCTTTTGTAAACCTAAATTCCCTTCCACATTGCACGTGGATCATACAGAT----AGAAGCTGGTGGCTGGCAAGCTTCCTCACTCCAAGGCTTT----------CAA--------CTCTAACTTGGATAAAATGCCCCTTTTTGAGAGAAGACAG-------------------------GTGGTTTAGTCCCAGTTGG-----------------------------------------GGTCCTCTCCTGAGCAAAGACCACGT--CAGTTGTGATGAATGAGATGTCATGATTTTGTAATGTGAACTGGT-CTCCCCTAGGAAATGAGCTGGGATCTCAAAACTCATTTCACTTGATTAGACTTCATGTCTCCATGGTGGAAGGCAAGTCTTTCATCTAATTCAGCCACATAGGACCACCTCGGTCCCTCTGCCTCCCCTAGGCAGAAATGAGCAAAA-GATTTGTTTTCTTCGATGACAGGGAAC-AGTTTGAGGCTGTTGCCAATGAGGCAGAATACCAGCTTTTAGGTTTCTTGAAGGCAAATCTTTAAAACTAAGTGTTTGAGTTGGGAGTTGTAATGACAGGCTTCAGTTTTGGAGCAGCAGATGATTATTTGCCCGTTTTAGTTTTTCCTTTGTCTCTCAACATTTCATTATGATTTATACCAGAAAAAACATTTCA chr4 + 94230402 32573564 32573563 32574503 32573564 32573563 32574503 940 TACCCATTAAAACAACATCTTAAG------ATCAAAATACTTACAAAAAGCAGAAGCAGAAGTGGAGTTATGACAATGCCCTGGAAGAAAACAACATAGAT-----TTGTTCATTAGTCAGGGAAGCAGAATACTCACTGT----------ACTTTGATACAAGGAAATGCACA-------AATGTCATTCAGCAGCATGAAAATTAAGTGACAATAAG--------------TTTAACTTCACTCTTC---------------AGTGTACTTTTTTTTTTTTAGCAACC-----ATACATCAACCATTTTGGGAACCATACTCAGTGCAAAGTTTTTATTTTTATTTTTAAACTCTAGTTTT-GCCCATTTTGGACCTAAGCCCCACTAATCCAGAAAAACTGATAGATAAAAATACAACTATCTCCATAACTTTGTCTTTATAACAAATACAGTCCTCTA---CAAATAAAGTTACCTTT--------AAAACATATTAAAGCCCTCCCCTCACTGTGCTGTACCTTGATTCCAGTAAGCCACCCCTCCTAGGGATCGATTCCCATGCTACCCAATCGCAGGTCTTCATCTAAGCAAAAGCCACATATCAACCGTGATGAGTTAAGTGTCGTGACTGCGTAATGTAAACTGATATTCCCCAAGGAAATGAGCTGAGATCTCAAAACTCACTTCACTTGATTAGACTTCATGTCTCACTGGTAGAAGACAAGTCTTTCATCTAATTTAATCACACAGGACCACCTCAG-CTTTCCACAGCCCCCTGGCAGATGCAAGCAAAAGGATTTTTTGTCTTCACTGACAAGGAACAAGTTTAAAGCTGATG---ATTGGACAAAACAGAGGGATTTAAGTTTCATG-AGACCAATTCTTAAAATGAGTTGTTTGGGTTGGGAGTTAACATGACATGTTTCAGTTTCGTGGCTGCAAA-AAGCAATTCCCCATCATCG---TTCCATCTCACTTCAATATTTTATTATTGCT-----CAATAAAATTATTTTA ..x.:x....x.x..:..x....:------...........:...........x..x..x..x..x.....:..:........:......-:..x.x...x-----.::..:..:..:.x..:......:.:...:x..x.----------...:...x:..x:.:.:...x:.-------.x..:::..:.-----..:...x:..:.x..:..x:..--------------:...:...:-......---------------.x.::.x..x...x.x...:...:..-----::...x.x....x.:..--------x..:..------...:x.x...::x...x.....::x.:..::-x:...:x...x..x.::::.x:..x:..----.:..:...:.:.x.::x..xx:xx..xx.....x::....----------...--------.....---:::.....:.xx..:..--------..:...x-------------------------..:x:..::.:.....x:.-----------------------------------------....:..x:..:......::....:.--..:::.......:.x.::....:...:.x:.......:.....:.-:.....x.............:..............:.........................xx....:....:..................:.::....:...........:.-.::..::.xx....:x......x:::.......-.....x..x.....:x.....:.....-.....:.:....x..---..x:.:..:..:.xx:.xx....:.....x..-..:.x...::......:x.:x......:..........:xx......x.:........:.x:..x...:.-:.x:.x..x...:.:x.x.---....x.:x:x::....:....:.....x::.-----..:x....x:....:. 24M6D60M1I10M5D35M10D23M7D11M5I22M14D9M1I6M15D26M5D17M8I6M6I31M1D28M4I40M10I3M8I5M3D17M8D7M25I19M41I26M2I45M1I113M1D33M1I27M1I15M3D32M1D70M1D19M3D31M5D16M 579/826 70.1% 940/94230402 0.0% 202/826 24.5% 113752353 76462202 +10742 chr4 + 190214555 146329878 146329877 146330190 313 TTTCTCTTTTCTCTTTCCTAAGTAAATTCT-CCTGAAAATGGATAAAACCAAAGTGGTAGGAGATAAGCACTTCTAGCAAAAGATGTTACCTCCTCCTTGCAGATTCAAGG--TAAGACATAGATTTAGCATCCTTGCAATTGGGATGGTGTATAAAGCTTTCTGATTGCAACACCTGAAGAAGTC-AAGTCACAAACTGACTGGCTTTCGTTGTCTCCTGAAAAAACTTTCAGAAAATCCATTTACACCTCAGATGTGAATGACTAGGTGAATGTATTTCAATGACTTTAGTGGA-AAGAAAGAGTGTTAAATCTTA chr4 + 94230402 32577039 32577038 32577349 32577039 32577038 32577349 311 TTCCCCTGATTTGCTTTCCAGGCAAGTGCTGTCAGATAGTGTATAGAGATAAACAGATTGGAGATTAGCACTTCTAGCAGAAGCTGA-GTATCTGCCCTTCAGAATGAAAGGTCATTACACAGTTTTAGCATCTTCAAAGTTCGGGTGGAGTGTTAAGCTTTCTGACTGCTGCCCACAATGGAGTTGAAGTTGTAAAGTGACTGCCGTTTGCTATCAGC--AGAAAACTTTCAAGAAATCCATTTACACCTCTGATGTGAAAGACTGACTGAATATATTTCAACGATTTCAGTGGAGAAGGAAAAA----AAATCTCA ..:.:..xx.:.x:..:.:.:.:..:.x..-:.x..x.:..x...:.:x:...xx.:.x......x.............:...x..x-::x..:x..:.x....x.x..:.--:.xx...:..x.........:.::x.:..x..:...x..:.x...........:...x:.x.x::.x.:...:-....:::...x......x.x..:.:.:..xx.--.:..........::.................x........x....::x.....:........:..:..:......-...:..:.:----......:. 30M1I56M1D23M2I73M1I32M2D75M1I9M4D8M 214/306 69.9% 311/94230402 0.0% 12/306 3.9% 113752839 76461716 +12383 chr4 + 190214555 146347675 146347674 146347939 265 CAAAGACTAAAAACCC---TCACTGTATAGTAATCTATATTGTTTGTGTACTGGTGCTGTCTGCTTAGCCCCAAGTCATCAATTATGTATAGAAATGTACAGCTACAGCAGTAGCCAGTGTCATGGGCCTGTCAGGGATTTCTTAAGAGGAACAAAAACAC-----------TTGATTCTATCTACTTTTAGAAAACACAGGATAGGTGAAAAGAGGAAG----AAAATGAAAGAAAATATGAGTAATCCTCAATACATACATTGGCTTCTTATAATAAATGA chr4 + 94230402 32583146 32583145 32583407 32583146 32583145 32583407 262 CAAACACAGAAAACCCAGCCCCCAATATGGTAATCTATATCGCTCGTGTTCTTGTGCTGCCTGCCTGGCCCCAAGTCATCAATAATGAATAGAAATGTACAGCTACAGCAGTAGCCTGTGTCATGGGCTTGTCAAGGATTTTTGAAAAGGAACAAAAACACAGGTTTGCCATTTGATTGCATCTTCTTTT-GCAAACACAGGACAGAGAAAAAGGGGTATTTTCAAAAGG---GGAGATATGATTAACC-----------------CTTTTCATAATAATTGA ....x..x:.......---:.x.x:...:...........:.:.:....x..x......:....:.:................x...x............................x...........:.....:......:.x..:..............-----------......x:....x.....-.x..........:..:x:.....:..x.x----....x.---.:.:......x...:.-----------------...:.:.......x... 16M3I142M11I18M1D29M4I6M3D16M17D17M 201/244 82.4% 262/94230402 0.0% 39/244 16.0% 113764529 76450026 +30680 chr4 + 190214555 146367866 146367865 146368615 750 AATAAAACAATGAATAGTTGAT--AACAAATGAGCCTTCAATCAAAGA---ACAATAGCAAGTGACAAAGGCAATTTTAAAACTATCACAGTCAAAAACACTCCTTTAAATTCCACCTCAGGACACTGACCCTCTTGCCCAGTCCTAAAAACTTTCCTTAAGTTTTGGAACAATCCCGAAAG--CTCTGTTTCAGCATTCATTATAATGCAGCTCAGAATTAACACTGCCAGGCTCCTTTCTAATCAATTATGCATTCAGATGTCCAGCATTTCTTTGGGGCCCCTTACCTTGACACCAGAATTGTTTAAGAGATGACACATGCATGTGTACTTTTTAGAATAAAAAGAGGACTTTAAGCAGGTTTTAACACTAAATGAGAACAAGGGTAAGAGCAGAGAAATCAACCCTTTCAGTCAAGGTTGGGCTTCCGGCAAGCTGCAGGCAGTACACAGCATGAGAGTATCTGGCTGCAGAAAATGCCCATGTGTTGACAGCTGAATAAGAGTTTGAAAGCTTAACAGTAC-AAATGTTCTCTCCATGGTACTGTTACATAGCTTTTCTTAACCAGACTGCCAAAAATCTCCAAAGCTG--TTGACAACTAATCACATGAAACTAATTCATTCTTGGCTTTGACATTAA----ATTAGCAAGTTATTATTTTTACGTAGGTAGTAACCCTGCACTGATTTGATTAACTGCAGAAAACAAAGGAACATTTT-----------------GTCCAGC----CTAAAACTTTAAATAAGAAAGACTTAAAAACC chr4 + 94230402 32589293 32589292 32590063 32589293 32589292 32590063 771 AATGGCAAAAAGCACAGCTGATTTAACAAATGAGCGCTCAATCAATGGTGCACTGAGGCACATGACAAAGGGAAGTCAAAACCCATTACATTCAAGAAT-CTCCTTTAAATTCCACTTCAGTGCACTGACCCTGTTGCTCAATGCTAAAGACTTTACAAGGTTTTCGAAAACATTTAGAAGAGCTTTTGTTTTGGCATTCACTCAGCTGCACCTCACAATTAACACTGCCAGACTCCTTTCTAATCAATTATTCATTGCGATTACTAGCATATCTTTTGAGCGCCTTAACTTCACATCAGAAGTGTGCGAGGGATGACACATGCATGTGTACTTTACAGAATAAAAGGCAGACTCTAAGCAGGTTTTAACGCTAAATGAGTACAAGGCTAAAAGAAGCGAAATCAACATTTTTAGTCAAAGTTGAGCTTCAGGCGAGCTGCAGGCAGTGCACAGCATGAGAGAATTTGGCTCCAGAAAGTGCCCATGTGTTGACAGCTGAATAAGAGTTTGAAGGCTTAATGGTAAGAAATGTTCCGTCAACGATAATGTTACA---CGTTACTTACTCACTTAGCTACTCATCTTC--TGCTGCCTTGACAGCTAATGACGCAAAACCCACTCCACAGAAGTTCTACTATTAGCTATACTAACA------TGTTTTGCTGTGGTTACCAAGGCT--AATATTTTTCCCAGCCCAACAAAACAGAAGAAAATTTTCAAAGAATAACTGTAAGGCACAACAGTGCTGAGAAATTAAGGCAGAAAGATCTGAAAATC ...::x.x..x.x.:..:....--...........x:........x.:---..x:x:...x:.........x..x.:x...x.:..:...x....:..:-................:....x:..........x....:..:.x.....:.....x.xx::x...:.:..xx..::x...::--:.:.....::.......:.xx:x....x....x...............:...................x....xx...xx.:.....x.....x.:..x.....x...x...:.....x...x::..:.......................x:.........:.x:....:...............:.........x......x...:..x..x.........x:...:......:....:.....x...:.............:.............x..:.....x......:..................................:......::...x-........:x..x.:.:..x.......---.x..x....x:..xx:x..:.xxx....:.--x....--......:.....x..:::....:x.:..xx:xxx:.:.:.:x:....:----.:..:..------.:....xx:..:.x..x:..xx..--.x.:x...xx::.:.:xx.x......:.:...x.....-----------------.:x..:.----..:.:.xx....:xx.......::.:....:. 22M2I24M3I48M1D82M2I342M1I27M3D30M2D5M2I48M4I7M6D24M2D38M17I7M4I32M 545/736 74.0% 771/94230402 0.0% 49/736 6.7% 113778573 76435982 +20154 chr4 + 190214555 146369942 146369941 146370702 761 CTACCAATTTAAACAAGATAAAAA-CACT---AAAAATAATTTGCAAAACAATTTTCTTT--ATGCATTCAATAAATAT-ATGTCAGAATAAACAAAAATCACAGAAGCTGAAAGTAAAAAAAAATCAATTAAAATAAAGTCAGAGGGCATGATAGAGAATTATTTCTGGCAGTTATTTGATATAATATGGTTAATATTTCTAGTCAGTCAAATTAACACAATTTTGCCACTGTAGATTTACAG-TCACAAAATGCATGCTCCCAAGAGGCTTGTT------GTTCCAAGAATCAGAGTA-------------ACAAATTCCTTTCTGGCATAGAACAAC-----TTGAC-CATTCTCTTCGGA-----ACACAAGTAATAAA-----AAAAATCCTTCAGAA--GAAAAATTAATTGACTATACATTCTCATTTGGCCATCTTTCTCTCCTTGATTTCTCCTTCAAAGTCCTTGGATAGAAACCAGTCCTTTTATCGCTCCATTTGTATCAAGAGATATGCTTTTCTTTCTTATCGGTCTGCCTATTCATATCATGTGTACTCTGCCATGT---TATTGATTGAAAGAAGCTCAGGCAAGGTGGTGTCAGCTTATATTCCTAAAGGGAGTCCCCTGAGCAGATTGGGGAGGCACTTAAGGTCAAATCAG------ATTGTCTGTGTTCCTACGCTAAACTT-CAGGGCACAAAGAAGAATATAGAGTTCTCAAGCATG------CAAAACAAATA---CCGGCATTCAGCCTTTTTTAATCTTCCCCCACAGCGCTCAGAGGTACTTTTCATAGAAGAAAATTT chr4 + 94230402 32592697 32592696 32593495 32592697 32592696 32593495 799 CCACCAATTTATGAAAGATAAAAAACACTCTCGGAAACAATTTACAAAACAATTTTCTTTTTACACATTTAATAAACATTCTGTCAGAGTAAACGAAA-CCTCAGAAGCTGGAAGTTGAAAAAAATCAATTAAAATGAAGTCACAGGAAACGGTGGGGAATCGTTTCTGGCAGTTATTTGATATAGTATGGTTAATATTTCTAGTCAGGCAAATTA--ACAGTTTGGCTGCTGTAGACTTGTAACTCACACGATGCAGAACCTCAAAGGGTTTGTTCCTGAAGTTGAAGAAATCTAGGCATAAATATTCTTAGATAGCTACATTTCAGACGTACAGTAGCACTCATTAACTTATATACTGAGGAAATCTACACCACTAAACAATGCGGAAAAGAACATCTGCATCTAAAAAGAAACAGCACACACAATTCCACAGGGTCCCCTTCCACTCAAAGAATAAT--GTGAAAGCTCTTCGATAAAAAAC---TTACTTCTCTATCCATCTGTATCAATGGATGAGCTTTTCTTAAATACGATTCTAC-----TGTATAATTTGTACTGTGCCACACTCATATTGATTGAAGAAAATTCAAGTAAGGCAGTGTCAGTTTCTATTTCTACAGGGAAACCACTGAGCTGAACAGCCAGGCA-GTAAGGACAGATCAGGATCCAACCTGCTGTGCTGCTACCTTAAAATTATACAGCATAAAG------GTAGAAAACACCGGTATGTTTTGCCAAAACACAAACACCCTGAATTCAGTTTTTTCTTTTCATCATC--CAGTACTT----GTATTTTGAATAAAATAACTTTT .:.........x:x..........-....---::...:.....:................--.::....:......:..-x.......:.....:...-:.x.........:....x:..................:......x...:x.:.:.:.:....::......................:......................x.......--...:...x..::.......:..::.:-.....x:.....x:x:.:...::..:.....------...xx.::....x::.:.-------------.:.:x.x.x....x.:.:..x.::.:.-----..:..-:..x:x..xx...-----....x.x...xx..-----....:xx.x..x.x.--x.....xx..:x.xx:.:...x.::..:xx..:.x:...:.x...xxx..x.xx.--x.x....::...x....:...x.---::x:..x..xx.....:........x:...:x.........xxx..:x:x...:.-----::...x..x......x.....:::---...........::..::...:.:....::.......:..x....:...x.....:x..x......x..x::.xx.....-x.....x..:.....------.::xx.....:.x....x:....x..-:.x:...:....------:....:xx.x.x:.:...------.......x.x.---..x.x......::....:.xx..x..x:.--...::..:----...:...xx...:..x..xx... 24M1I4M3I28M2I17M1I18M1D117M2D26M1I31M6I18M13I27M5I5M1I13M5I14M5I15M2I55M2D23M3D55M5D24M3I79M1D15M6I26M1I12M6D18M6I11M3I29M2D8M4D23M 520/735 70.7% 799/94230402 0.0% 90/735 12.2% 113777245 76437310 +3418 chr4 + 190214555 146379923 146379922 146379989 67 CTTGACAAATAATTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGCGTGTG chr4 + 94230402 26578253 26578252 26578319 26578253 26578252 26578319 67 CTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ....:...x:x.x.:...................:.:.x.x.x.xx..:...:...x...:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 119801670 70412885 +3314 chr4 + 190214555 146388619 146388618 146388701 83 CGTGGTGGTGCGCGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......:..--......:.........::.:........x.xx.x...xx:.x.........:..x.xx:.x:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 70355422 NA +33615 chr4 + 190214555 146391597 146391596 146392158 562 AGGGACAGAGG-TGTATAAAAGGCAGATGAA-GTCTTGTCTTCTCAAGGTCAATACATCTTCTCTAAA-----------GTCCCCATACATCCCTAACTCTAATCAGTAATTGTCATTAAAAGCTCTCATTATGTGAAGTAGGTGCAATTAGAGCATCTTGCCCTCACAAGGTATACTGCACTGAGAAGGCTGGAGG--TTCATAAATTAGTGCCAATTCATTCTCCCTCT-ATCTTCCATACATTCTGCTGTGAGAGAGAAAAATTATATTCATACACATTAAGGCAAAAGCCCACTGGCCCCTACAAAATTACCCTAAACAGTAACTGTGGTTATTTGAGGAACTCCCTATTTCATTATGCGTCTCAGGAATAAAAGAGATAAAGTTTGCCATCAATAACACTGAACATATCTGCTGAAACCCGCAGATTCCAAGACATTAATAATTCAAAATCTTGTGGGAATTTTGTCATGGTGGAGATACGACTTGTCTGCAAACGGAGCTCAGGGGATGCTCAGTATGATCTATTCTTGTATATACATACAACTGCTGCATTCATCATGACATGCAAAAGAA chr4 + 94230402 32604479 32604478 32605050 32604479 32604478 32605050 572 AAGGAGAGAGACTGCATAAAGCAGAAATAAAAGTCTTCTCTGGTGATAGCCAATACATCTTCTTCAGACAGAAAAAATGGTCCCATAACATCCGTAACAACAATCAGTAATTGTCATTAAAAGCTCTCATTATATGGAGTAAGTGTAATTAGAGCATCTTGCCCGCACAGGGTGCAGCACACAGAGAATGCTACAAGGATTCATAAATTAGTGCCAAATCAGTCTCGTTCCCATCTACTACATAATCTGCTGTAAGAGA--AAAATTGTATTTATACACATTAAGGCAAA-GCCCACGGCCCTCTACAAAATTCGCCTAAACATGAAATGCAGTTATTTGAGGGACTCCCTATTTCATTACGTGTCTGAGAAATAAAGG-GATAAAGTTTGCCATCAATAATGCTGAACATATCTGCTGAACCCCGCAGATTCCAGGGCATCAATAATTTAAACTCTTATGGGAATTTTGTCATGGTGGAGATAGGACTTGTCTGCAAACGGAGCTCAGGGGATGTTCAATATGATCTATTCTTGTATACACACACAATTGCTACATTTATCATG--ATGCAGAGGAA .:...x....:-..:.....:x:x.:..:..-.....x...xx.x.x:.:.............::.:.-----------.....xxx......x....xx:................................:..:....:...:..................x....:...::.x::...x.....x...:x.:.--..................x...x....x:..:-....x.:.:.:.x........:.....--......:....:.................-......x.x..:..........xx........xx..x..::...........:................:.:....x..:......:.-.....................::..................x.............:.:...:.......:...x....:.........................x..............................:...:...................:...:....:....:....:......--.....:.:... 11M1I19M1I36M11I118M2I32M1I27M2D29M1D88M1D185M2D11M 465/556 83.6% 572/94230402 0.0% 22/556 4.0% 113787118 76427437 +3268 chr4 + 190214555 146406843 146406842 146406925 83 CGTGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x::.--....:.:...........::........x.xx.x...x........:.x:.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 70373646 NA +3015 chr4 + 190214555 146406977 146406976 146407015 39 CATCTGAAAAAACAAAACAAACAACAACAACAACAAAAA chr4 + 94230402 89758358 89758357 89758396 89758358 89758357 89758396 39 CATCTGAAACAAACAAACAAACAACAACAACAACAAAAA .........x..xx......................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 56648619 NA +20831 chr4 + 190214555 146411835 146411834 146412320 486 TTGCTGGAATAAAACTTACATAATGAAGCTCGTTTT-------GCTTGTCAAGTGCAGATGAAAGGAAGAAGGGAAATAA---------CAGTTTAAATGTAAAAGGCACCTTTTCCCTAACTCCTCAACTATTTCACACAATAAAATGAATAATTTAACTACCTGAAACTTCATATGTGCAGAACACTGCATGCAGACCAGTGGCATTTTCACTTCGAATTTGTATAGTCTTTAGTCAATACACTTCATCTGCATTTCTAACACCTGCTTCAGTCAGCTGTGAAGTACGCTGTTATCTCTACAGTTGTCTTTTATCTTCACTCTGTCCATCTAGCCAAAAAAAAATTACGTGATAGAATATAATTGCTTGGC-CTAAAAGATATGGGGAGTAATTCAC-------ATGACTTTCTCAAAGGTATTTTC------------CTTTATCTTATCAATAGATAA------TTTTAAAACAAGTTACTAATTA---ATGTTGTC--ATTCTTTATAGCATACACCTCCCTCAAACA chr4 + 94230402 32608927 32608926 32609454 32608927 32608926 32609454 528 TTCCTGCAAGGAAGCTTACACAACGAAGCAAATTCTCTTAGCTGCTCATCAAGTACTGTTAAAAGAGGACAGGAAAAAAAATAGAAGCCCATCTGAAACGCACAAGG-ACCTTCTCCCTAACTGCTGCACCGTTTCACACAATAAGATTAATAATTTAACTACCTGCAACTTCACATGTGCAGGGCACTGCAAGCAGACCAGTGGCATTTTCACTTCAAATTTATATAGCCTTTAGTCAGTACACTTCAACTGCATTTCTAACACCTGCTTCAGTCAGCTGTGAAGTGCGATGTTCTCTCTAAAATCTTCTTTCATCTTTGTACTGTCCATCTAAC----AAAAAATTATATGGTGGTGGATAATTAGATGACTTTAAGAAGGATATGAAACTTTTCACGTTTTTGATCATTTCTTGAAAGACATGCTCATATATTTGACATTCCATTTTATTAAAAGGTAGAGGTTTTTTCAAAATGGCTTTCACATTATTTATGTTATCTAATCCTATGTAATATACGTCTCCTTTGAATA ..x...x..x:..:......:..:.....xx:..:.-------...::......:.x.x.:....::::x...:...x..---------..x:.x...:.:.x....-.....:.........x..xx..::.............:..x.................x.......:........::.......x........................:.....:.....:.........:.........x.....................................:..x....x......x.:.:x.....:.....:::x...........:.----.........::..:.:.x:x......:xx..:.-:...:.::x..:x.:.::xx.....-------..x.:..::.x....::..x:..------------:.::..:....:..x..:..:------...:....:::x..x.xx....---.....:..--..:..x.:..::....::....:.::..:. 36M7I37M9I18M1D228M4D33M1I25M7I23M12I21M6I22M3I8M2I30M 360/481 74.8% 528/94230402 0.0% 52/481 10.8% 113802908 76411647 +3687 chr4 + 190214555 146428037 146428036 146428119 83 CATGGTGGCGCATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGTGAGAGGATAGCTTGAGCCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--......:............:........x:xx.x.:.xx:.....:..::.:..x..x:.....:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 70394840 NA +19433 chr4 + 190214555 146435927 146435926 146436278 352 AATTAATAA-AAATTAAAATGAAAGTACATGGCATTTGTTAAAGGGTAATAAA----ATAACTCCAGTCAATTGGCTAGTTCTACACCAGTAGATTTCTTTAAATGGTAATGAAATCATTGCTTTAAAAAAAATCCATCATTATTAAAATAAAAAAAAAAGTTGCTTCAGCCTCCACCAAAATTAGATTTGTAAGTTGCTGGTCATTCCTATAATTAAATCTGTGTCACAAATTTGCAAGAAAAATGATCACTGTGACTAATGCATTTACTTGCTACACAAGTCCTGCCAGACAGCATAGAACATTATG-CTGCTAAAATGGAATAGGTACAGATCCTATACATTTTTATTAAGTAAC chr4 + 94230402 32614995 32614994 32615343 32614995 32614994 32615343 349 AATCAACAACAAAACCAAACCAAAACATTCAACATCCATAAATGTAAAATAAAGCAAATAAATTCAGCCAATTGGTTATTTCCATATGAGTGGATTTCTTTAAATAGTAATGAAATCATTGCT----AAAAAATCCATTGTTATTAAAATAAAAAAA---GTTGGCTCAGCCT--ACCAAAATTAGATTTGTAAGTTGCTGGTCATTCCCATAATTAAATCTGTGTCACAAATTTGCAAGAAAAATGGACACTCTGACTAATGCATTTACTTGCTGCACTAGTGCTGTCAGGCTGTGTAAATCATTATGCCTGCTAAAACAGAGTAGATAAGAATGCCATACATTTTCATTAACTGAC ...:..:..-...x:x...:x...::.:x:::...:::.x..x.x:x......----....x.:...:.......:..x...:.:.:x...:.............:.................----...........::.................---....x:.......--..................................:.....................................:x....x.....................:...x...x...:...:.x.::..:.x.......-.........::..:...:..x::..x.:.........:.....x.:.. 9M1I43M4I66M4D30M3D13M2D134M1I48M 280/343 81.6% 349/94230402 0.0% 15/343 4.4% 113820932 76393623 +18423 chr4 + 190214555 146438982 146438981 146439319 338 CTATCAAATTTTATTAAAATCTCATTAAGAGAGAAATCTCAAATCACTTACTATGCTCCACAATTATTATAAACTGAACAATTTAAATGAGAGGAGGAGATAATGACATTAACTGCTTAACTTAAAGCAATCCTCCATGGCATGATTTTAAAATATTTTCTTGGTCTCAAATTTATGTAAATTGAATTCACCTATCATTAGTTATTACCAGCCTAGATACATTAAAAACAATAACATCAACAACAACAAAAACAGCGTTCTATAATAATTAGTTCCTAAAAACAC--TGTTTAAATTAGACCTGGGACATTATTAAAGTAGCTATAAATATGTACAGTAT chr4 + 94230402 32616903 32616902 32617215 32616903 32616902 32617215 313 CTATCCAATTTTATTAAAATCTCATTAAGAGGAGAAACTGAAATCACTTATTAAGTTCCACAATTATTGTAAACCAAACTGCTTAAGCGAAGGGAGGAGATAATGATATTAACTACCCAACTCCAAGCAATCCTCTGTGGTATGATTTT-AAATATTCTCTTGG-CTGAAATTTATGTAAATTGAATTCATCTATCGTTAGTTATTACCAACCCAGCGACAT-------------------------AAAAACACTTCTCTTTAACAATTAGTTCTTTAAAATACTGTGTTTTAATTAGACCTGGGACATTATTAAACAAAATGTAAATATGTGCAATAT .....x.........................:::..x..x..........:..x.:............:.....::...x::....::..::..............:.......:.::....:x...........::...:........-.......:......-..x......................:.....:.............:..:..xx....-------------------------.......x:x:...x...:.........:.x....:..--.....x........................xx.:x.:.........:..:... 149M1D14M1D57M25D38M2I53M 258/311 83.0% 313/94230402 0.0% 29/311 9.3% 113822079 76392476 +45361 chr4 + 190214555 146442343 146442342 146444106 1764 AGTAGCTTCTTTGACAGTGAAATGTACAAAATAAATGGCATGTCAACAAGTAAATTAGCATTCCCTTTCTGACCAGCTGGGTCATGTTTCCTTTTCAAAATCCTCAGTCCCATGATACAAAATAATAATAATCTAAAAGACCTCATTA-AATGATCAATATATTGACATAACCTCTATAAGGAGACACATAGTGTTTTAATTGATTCCTTGAATTCATTAAATGGAATTTTAAAAC----CCAAACCTCCAAAATATATTGTAA---GAGAACATTTGCTTTATTCATTAACTACTTTTCTTCAGGGT---ATGGATACTGGCACATGAAAAGATTCAACAATTTTTATACTTAACCAAAGAGTAAAACAAATCCAGCTTTCACTAAATCTTTCATATAC-------------------------------ACAATAT---CACAGCAA--AAGTTGTAATAGACAAG----TTAAACTATGT------------TTACTTACCAAAAAACTTCCAAAGGCTGAATTAAATATTGCAGCTGCCTATGAAGAAAATAAATAGGGGAAAAAAACTCATTGAAAGTAAA-TAAGAATAATAAAGCCAAAGATTATCATTCTCCCCTCCCCCA-CTATTCAAAACCTTAAA---------ACATTGACTCTATAAAGCAAAGTTAGTCACTGCTTACAAAAATTGCCAGTGGCCTGTAGTTTACTAAGACAGATGAGCTACA-GCTTAGGAATTCATAAATAATGGGTCT-------CAAAAGCAGGCAGA-------AAACGCTTGTCATGCCTTGAACCTATATGACAGTACCAAAAGAATCAT---TGCCAA---------------TACTAAATTGAGACCATGT--------TGCTATTG---ATTTTCCTACTAAATTTAAAACAATCAGAGATTGATTTATTTGTTTAAAAAT---GTATATTATTGGAAGAAGGAAAAACAGAATTGTAAGACAAACATTAATTGCTGTCAGTGGCACAAGTCTTATGAGCTACAATCACAAGGTAAGATCTGTTTCTATA--------CAACACACA--TTAGAAATATGAACAAT----GCTGTTAAGACCAGGAAAGTTA--------------TTGCTGTACCATTAATTCTAAGGTAAAGAA------------------------AAGCAA-GAAAAGCTCCAATTTGGTGTTCAAAATTCAAAGAAAAAATATTTGA---CTCTCTGCTTACCTAAATATCCATGGAATACATAGCAGACGTAATATAGCTCTTAATTTTAATTGAATCACTATATTCAATGAAGCTATAC-CAGAGTCCTGCAA-GCTTCTCACATTACCCAAAAAGGAAAAAACT--TGTATAACATCCAATTTGATAAAAAGAAAACAAGAAAGAAAAAATAATA---AAAGGGGTAGAGAGAAC--CTATTTACATCTCCTGCATACCCAGAGCAGAATTAAATTAATCATTGTGGACATTAGCAGCCACACTGTAGTAAAAAGAGGATG----TCAGTTTAGTAAGTTTGAATAAAGTCCAAAGCCAGGCTAAGAGCTGTAGCTGAAAATGCCTTCTGCTCCAGAAGAGGATGCAATGAGAGTGAATGGGTAATGAGATCCTCGGCTCCAGAGAGCTTAGCTCTCCTATTCCAGTTCATAATTAATTCAAAGCTTTGATAATTTCATTAGATTTCTCCTTTGCTGGCCCTATCAATAAAAGATGGCACCGGACCACAGCTCCTCTGTGGCATAAACATAGGCACAGGCACAGACCAGGGAAACCT--------TTGCTTCCTGACAGGGACAATGGCATATGGTGTTCTGGGTTGTATGGGGAGCAGTGAAAAAAAGAAAATCAGCTAAATAAAACATTACAGATGACAATTGTAAACTATAGCAATATA-TTTAACACATCTTCCT chr4 + 94230402 32619586 32619585 32621442 32619586 32619585 32621442 1857 AGTGGCTTCACTGACAGTGAAATATGCTAAACAAATGACATGTCACCGAGTAAATTAGCATCTACTTTCTGATCAGCTGGGTCATGTTTTCTTTTCAAAATCCATGGCCTCTTGATAGAAAATAATGAGTATTTGATGGGCCTTATTAGAAAAATCAATATATTGACACCCACGTTTGAAACATCTGCATAAC-----AATAGATTCAGTTAACGCATTAAGCAGAAAATTAAGATGTGTTTACACATTATTAATTTACCATGATTAGAGACAATTT---------ATTCGCTACTTTCCTCAAGAGTTCAACAAAAAC---------AAAAGAAATTGTAGTATCTGTATTTAGTAACATGGTGAACTAAATTGAATTATTCCCA--TTTTTCCTACACGAAGCACACAGTTCCATCACTGCTCACGTTAACAATACAAACACATCAACGACATTGTTAGAAATAAGATCATTCAAGCATTTATAAATACTTCATTACTTACCAAAAAGCTTCCAAAAGCAGAATTAAATATAGCAGCAGCCTGAAGAGAGAA---------AAAAAAATATCACCAATGGTAAAATAACTGTAGTGCAGGAATAAAATGTTTTTGCCCTCTCAATCAGCTGTTTGATTCTCCAAACAAGCAAGTACACAAAGACCATTAAGTA--GGTAGCCACCGCTTACAAT--TTGCCAACGGCCCATAACTAATAAAGACCGATAGGTTCCAAGTCCATGCATACATAAA-AATGTGCTTTGATGGACAAAAGCAGGAGGAGAAAAAGAAATCTTTGCTGG----TAAACTTATGTGGAATATCTAAAAGAACTAAGGATGCCACACAGAAGATTAGTCTCACTGATTTGGCATTATTTGCCTGGAATATTTTTGCATACTGTCTTACTAA--TTAAAATAAATATAATCTGATTTA---ACTTAAGACTTTCATAGACTTTT------------AACAGGTTTAAAATAGAAA-ATTAATTA--GGTAATTGCTCA-----------CCATAATAACGTATTGACAGACGTTTCTATAGTTTAGTTCGACCACCAATTTCCAAATAGGAGCAACAAAAGCGAAAAAAACCAAAAGAAACAACAAAACCACAACCTCCCCATACCTCTGAGGCCAAAATATCAAACCATTACTTTTTACTCCGTAGCCTACGTAATGAAAATCAGCAATTTTGAG---------------AATGACTTTTGAAGCCTTTGTGCTTACCTAAAGATCCAGGAAATGTGAGGTAGCAGTATTAT--TTCTTAAC----ATTAACTCAAAAAATTCCAGGAAGTTAAAAGTTGAGTCTTGAAAAGCTTCCCCCAATTACCAAGAAAGAACAAACTCTTGTATGGCAGCCAGTCTGATGATGA-AAAGCCACACAGCAAAGGTAAGAGGCAAGGGAGGAGGGAAATCTACCGTTTACAT-----GACGACTTAGAGCAGAGTCAAATTAATCAGCCTGGACGTTTTCAGACACAGATTAATAACAAGTGGATGCTAGTGAGTTTAGCAAGTTTGAATAAAGTCCAAATTCAGGGTAGGAGCTGTAGCTGAACCTGCCTTCTGCTCCATAAGAGGATGCAATGAAAATGAATGGGTAATGAGATCCTTGGCTCTAGAGAGCTAAGCTTTCTTATTCAAGTTCATAATTAATTCAAAGCTTTGATAATTTCATTAGATTCCTCCTCTGCTGGCCCTATCAATAAAAGATGGCACTGGACCGCAGCTCCTCAGTGGCCCAAATACAAAAACAAATGCAG-CCTGGGAAACCTTTGCTGACTTGCTTACTAACAGGGACAATGGCATATGGCACTTCGTGTTGCAGAGGGAGCATCT----GAATAGATCCAGCTAAATAAAACATTAAAGTTGACAGTTGTAAACTATGCTAACATATTTTAACACCTTTTCCT ...:.....x:............:.:.x...:.....:.......x.:.............::x........:................:.............x::.:.:.x.....x........:.xx..:.:.x:.:...:....-..x:...............:xxx.x:.xx..:x.xx::....::-----...x.....xx.x..:x......:::...xx....:.:----::.x..x.:xxx...x..:::.:.---....xx....---------...x:.......:..:x..:..---.:::.x..---------......xx:x::.:.x.:.:..:...::x.x.x:..:..x:....:x.::.x.:x.:.--.:....x..:..-------------------------------......:---....x...--.x:....x.x.:.:...----..x..x:..x.------------..............:........:..x...........x.....x....:x::...:..---------:......xx...:::.x:.....-...xx:..:.:x..xx.x.:.x.:.:x..x:..:...xx:..-..:..::.xx.:::...---------...:x:.xx.:..x...:.--.x...:...:........x--......::....::..::.x.:x.....x...::.:.x..-.:::.x.x..x......-....x.::.-------..........x:..-------...:x:...:::x----.:...:...:..:x.xxx.:.......::.x---.....x---------------:...:.x...:x.::..x.--------.::.x...---.:.x..:......--......:..x:.x.:x:.......---::....:.x.---:..x.:.x..------------.....:x..:x..x.x...-.......:--.x:.:.x..x..-----------.:.:...x..:x:x.:.x.xx:.........--------.:..xxx..--..xx.....x..:...:----..x:xx..:....::.:.:x:.--------------.:x.::....x:.:.xx.:..::..xx:..------------------------.x.:..-.....x.xx......x.x.---------------..x:.:x.....---..:.x............x.....x.:...:::x:.:..xx...x...--:......:----...:.x...xx.x....x.x....:..x.x-:x.....:..x..-.....:.x..x.xx....:..:...x.....--.....::..x...:.:....:.x:.-...:.x.x.x..x...::...x.---..:..:.x..:..:.x.--.::.......-----.xxx..::........:.:..........x:x.....:..xx...x....xxx..:...x...x.....----.x.......:....................x:....x..:..............xx..............x...............:.:....................:.....:........x....:..:.....x.........................................:.....:............................:.....:.........x.....x:...:.:.::x...::::...-..x.........--------......x..:....................:::.::.x....:.x:.......x:x----:..x.:.x:..................x..x.....:...........:x:..:...-........x.:..... 148M1I44M5D38M4I24M3I10M9D22M3I8M9D58M2D12M31I7M3I8M2I17M4I11M12I59M9D23M1I42M1I17M9I19M2D19M2D40M1I17M1D9M7I14M7I13M4D31M3I6M15I19M8I8M3I13M2D24M3D10M3I10M12D19M1D8M2D12M11D31M8I9M2I17M4I22M14I30M24I6M1I19M15D12M3I47M2D8M4D30M1I13M1I31M2I25M1D23M3I17M2I10M5D69M4I259M1D12M8I56M4D57M1I16M 1182/1658 71.3% 1857/94230402 0.0% 305/1658 18.4% 113822757 76391798 +40483 chr4 + 190214555 146453199 146453198 146453774 576 TGTTTGTAACTATTCATCTCAATTCAGGTAAGGAAAAAAATATAT--TCAAGTTACTGTTTTCTGGGTGCTAAATTGAATCAGGTGTCCTCTCCTCTTAAGAAAATTAAGTTGCTTTTGTGCAAGAGTGTTTTAATGAGAACAGAGCCGGCCGACAGTGATAAATGGGAATGACACCAGAGAGAGCACATAAGCAGGACAATATGTGCATGTTACAGTCTTACAGCCTATTTTTCACTGACTATTCTGAATGACTTCTCTGTTTCTTAAGGGGCCTATTAATCTCAAATTTAGTTATTGCACAACGTTTATTTGAACATATATTCTGTGGATGATGACAGTTAATAAAGGAAATCTTTCACAAGCTGTATTTTTACATATTGTTCCAACTACAGCTCTCAGTCATTTGATGGTATTGATGGAATAACCTACATTGTGCTGAGGCTTTTTTTAAAAAGGCACATATATTCAGATTCCTTTCTAAGCACATGGGGACTCTTAAATAACCGTTAAAACGCATACAAAAAATTCTAGTACAAAACAGTAAAAGTAAAAGGA--CATCTTAACTGTTCAACAAAA chr4 + 94230402 32625066 32625065 32625639 32625066 32625065 32625639 574 TGTTCATAACTATTCATCTGAGCTCAGATGGGAAAAAATATATATATTCAAGTTCGTGATTT-TGAGCACTAAATTGAATCAGGTGTCCTCTTCTCTTAAGAAAATTAAGTTGCTTTTGTGCAAGAGCGTTTTAATGAGAACAGAGCCTGCCGACAGTGATAAATGGGAATGACACCAGAGAGAGCATGTAAGCAGGACAATATGTGCATGTTACAGTCTTACAGGCTATTTTTCACTGACTATCCTGAATGACTTCACTGTTTCTTAAGGGGCCTATTAATCTCAAATTTAGTTATTACACAACGTTTATTTGAACATATATTCTGTAGATGATGACAGTTAATAAAGGAAATCTTTTACAAGCTGTATTTTTACATATTGTTCCAACTGCAGCTCCCAGCCATTCCACCGTATTGATGGAATAACCT-TGTTATGATGCAGC--TTTAAGAAAAGGCACATATATTCAGATTCTTTTCCAAGCACGTGGGGACTC-TAAATAACTGTTAAAATGCATAT-AAAAATCCTACCGTGGCACGGCGAAAATAAAAGGGGTTGTGTTAACTGTTCAACCAGA ....::.............x.::....:.::.:.....x......--.......xx..x...-..:.::.......................:..................................:....................x......................................::....................................x..................:............x........................................:.............................:.............................:...............................:......:...:....:x.:x..................-::..:..x..x:..--...xx:.......................:....:......:.........-........:.......:.....:-......:...x:::::x..:.::...:.......:--::.x.............x.:. 45M2I15M1D366M1D14M2D51M1D23M1D35M2I21M 503/570 88.2% 574/94230402 0.0% 10/570 1.8% 113828133 76386422 +17805 chr4 + 190214555 146462606 146462605 146463136 531 ACTAAAAAGTAAAACACTAGTCAGTAAGCAGTGAAGCACTAAATCGACTTCAAATTCTTATTAAGGTTATCCTTCCGTTAGTGACTGAAGGTATATTAGCTTAGTGAGCCATGCAATAGCTGTACCACCACAACTAATGGACTGCCAAGAGATGATTTAATA-AAGAGGCCCAGCTGAACAACGGTGTGTAAGTAACTCTGACAACCTGAGGCTTTCTCCTGGTCAAACGTTTTATATCTGTAAGCGACTTTCTCTAAAAAAAAATCAC------CTGT-GAAGATACTCTCAGAAGGTTTCACTGTAATAACAGTAGCCCAAACAT--TCTTATGTAAGTTCAGATTCTTCAAGATCTTAAGCTGTGATTAAAAAGAAAAAAAGCTTAAAGGTCTTGTCCCCAGATCCTTCTACAGGCAC--CATTTATAACATGGTTAGAGATCCAGTTAAATAACACACTCAGCAACTACACCATGTA-CATCTTTTGGTTGAAGTAAAATAAAGAAATACAGCAACTTTTAAAATGCTGCCCTCTAGATT chr4 + 94230402 32628164 32628163 32628688 32628164 32628163 32628688 525 ACCAGAAGGTACCACACAAG---GTACTTGGGGATGCA----AGCTATTCATAAACCTTATTAACATCCTGTATTTGTTAGTGACATGAGGCTTACTACCTTAGCAGTGAAGACACTGGCTCTCACACCAGAACAAATCGACTGCTGAACTATGATTTAATACAGGAAGCTCAGCTAAATGATGGTATACGGGTAACTCTGCCAACCTGATCCTCTCTTCTGGAGAAACATCTCATAACTTCAAG----TATCCCTAAAATAAAATAAAAGAATACTGTAGAAGGTATCCTCAAAAGGATACAAAGCAATAACAACCACCCAAACATACTTTTATTTAAGTTCACATTTTCTGAGATCTTAAGCTGTGAT--------AAAAACACTTAAAGGTCCTGTCCCCTGATTCTCCTGGAGACACATCATCCATAACATGATTAGAGGTCTAGTTAAACAATGCATCCCACAACTCCAAAGAGTATTACTTCCCTGCTGAAGTGAAATGAAAGCACAAGGCCACTTTTTAAAAGGTGCCCTTTGCATT ..:.:..:...xx....x..---...xx::.x..x...----.x.x.:.:xx..x:........x:.:x.x:x.::.........xx:...:x..:..x.....:::xxx.x:..x.:...x.xx.....x...x...x......::.:xx...........-.:..:..:.....:..::.:...:.::::.........x........xx..:...:....xx....:.:.:...x..x:...----.x..:......x.....x.x------....-....:..::....:....x.x..xx.:.......::x:.........--.:....x........x...:.:::.................--------.....x:..........:.......x...:..:..:x..:...--...::........:......:..:.......:..::..::.x:.....x..xx:x...-:.::.:::x.:......:....:..::x.:.x:..x......x...x.x......:.:x... 20M3D15M4D120M1I82M4D20M6I4M1I47M2I41M8D43M2I58M1I62M 356/512 69.5% 525/94230402 0.0% 32/512 6.2% 113834442 76380113 +24415 chr4 + 190214555 146472098 146472097 146472845 748 TTCTATAAAATATAGTGGAATAACTGAGGGACAAA-CATTAAAGAATAATGAACGTGCAAAAAAAATGCACTGCTGTCAGCATTATACCTGGGTACAAATGTGTTAGAGCATCTTAGTTTAAAACAAATCAAGTTAAGCGCCTGTTTAGAAAAACACTTCCATGTACGGCATACAT-ACCAGTGTTAGGAAGAAA-----AACAAACCCAGAAATTAATTAAGAAATGGG--TGGT---------TTTACAGAGTG---CTATAAGAAGAACTTTCTAATAAACTTTCTGTCTATACTTAGAGTGAAATCTTCCTACAGATTTCCTTCTCTCATTTACATATCTGTGCAGGCTTATTCTGTTTTTTTTTTTTTTTTTTCCTTTCAAGCCCCTTTGCCCTTTCAATCATGAAGCATATTACTCCACTGTCAGTGCAAAGCAGTTCCTAACAACAGGGAACCCAGCTGGGATAGGAAGAGGGCAGCGGGCTCATGCATTAACATAATAATCCAACTGTGTTCCCATAGGCCCTTAGGGCAGACAGCATATTAGGTAGGCCTCCTGTGCAGACCCTGGTGGAAGCTGCCTTATCACCTGCCTATCAACCTGTGGCAGCTAGAGCTAGCTCAACAGCACCAGCTCCTGCCAAGCAGTGGTGCCCAATTACTTTACTACAAAAGACAGAAATCCATTTTTCTATGTCTGTTTAATGTACCCAATGCATTTCCTTATTTATGATTTGAATCTACATTTCTGCATCGTTTCCAGAG chr4 + 94230402 32631896 32631895 32632581 32631896 32631895 32632581 686 TCCTGTAAGCCATGGTGTGGCAATATAGTAGCAGATCATGAAACAGTAATCAAAGT-CCTGAAAAATACACCATTGTCAGCATTGTGCACTGGTACCATTGCGTTATAGCACCTCGGCTTAAAATAAATCAACCTAAGTGCCTGCTTTGGTAAGCACTTCAA-ATTCAGTGTACATCAGCAGTGGGGGAGGGGGAGCGGTAATGCACAGAGAAACAAATCAGAAAATAGGACTTGTAAATAACAATTCAATTAGTGAATTTATATCACTCGCTCCCTAATAAACTTCCCCTCCTCACCTACAG-GAAGCCCTCCTCCAGCCTTCCCCC-CTCATTTGCATGGCTGCGCAGGCCTGCTCT----------------TTCTGCAGCGAGCCCCTTTGCCCTTTCAATCATGAAGTATATTACTCCACTGTCAGAGCAAAGCAGTTCCTAACAACAGGGAACCCAGCTGGGATAGGCAGAGGGCAGCAGGCTCACGCATTACCATAATAATCCAACTGTGCTCCC-CAGGCCCTCGGGGCAGACAGCATATTAGGCAGGCCTCCTGCCCAG------------GCTGC---GTCACCTGCCCGTCAACCTGTGGCAG--------------ACACCGCAAGGGCCTGC----------TGCCTGAGCGCCTGGC-----------------------TCTGTGGCTGCTCACTGCAGCTAGTACGCATCCTTACCCGCAGCTTGAGTGTCCCCTTCCGTGGGGCTTCCACAG .:..:...:x:..:...x:::..:xx..x::..:.-...x...x.:....x..x..-.xx:......:...:::..........:.:.x:x.....x.x..:....x....:..::.:......:.......x:....:.....:..x.:x..:......x.-:.x.:.::.....-.x.....xx:.:::.::.-----..::x..xx.....:x...:.::....:..--.x..---------..:.xxx....---:....xx.xxx:..::...........:.:x..:x:..:..x..-...::.:....x...x:....::.-.......:...:x...:......:.::...----------------..::x:xx.:...........................:..................x.........................................x..........:......:......x..................:....-:.......::...................:..........:x...------------.....---:.........::..............--------------...x.:.x..xx.....----------....::.x::.:.x:.-----------------------...:..x...:.:.x..:.x.:.:.:.::x......::::::::....:.x.x.x:...:.::xx.:.....x.. 35M1I20M1D105M1D13M1I18M5I30M2I4M9I11M3I44M1D24M1D30M16D147M1D45M12D5M3D26M14D17M10D16M23D75M 482/665 72.5% 686/94230402 0.0% 104/665 15.6% 113840202 76374353 +27748 chr4 + 190214555 146477603 146477602 146478500 898 ACAAGAATTTTTAATTAGCATTTCATTAGTAATACCAATGTGAAAAGAAAGAGGTCAACTATTAATAAGATACAGATTTCCCACCACTGGGATTTATTCTGAATTCATTTTAGGAACAGGAAGCTGTGATCTAAAAATCACCACTCTAAAACAGATAAAAGTTGAAATACTTGTGCTTAAAAAA----GATTAGGAATTTAAGAATAGCTTTTTGTAC--------------ATACAAACCATG-TAGTTCCTAACTATTGATGTATAATTTTAAC--TTAGAACCATAATGCCCATTCATTTCATGATAAATGATAACACACTTGATAGCGTATCTATTTGGGAGAAGAATAATGGCTTAGAGATTTCAATCAAGCACGAGAGTACCTTTTCATTTCTCTTTTTTGGTGTGTGCACTTAATACTGCACAAAAGAAAACATA-----TCAAAACAGAAATATACT--CACTAAAATTTAAGGTTATTCCAACAAAAGGGTTAATTAGAGAAACAAATTTTCTCAGACTGTTAATAATGGGAATGACACATACTATGTGCCCATAAGTAATTCTCAGGTATCTTTGATCTTCAGCCCCACGCGGTTTCTGTTGCCTACCATAGCCTGGCCTCTGGGACTCTCTCAGAACCAGACATCTGGCTACTTTGTTGTTTTAGACTAATCTCCTCCCAGGAGAGCTCAAGAAATGACACCAGGCAAGGAGGGTCCTGGCAAGGGAAAAAACATTACAGTATTAGCAGATTTCTTTTTGAGTGGACGAGAGTATCAAAATTGTTTTCAAATTTCTACAGGGGTCTTAGGAGCTCTTCTGTTCTGTGGTTTTACTGTGGCAAAATTTAAATAGGATGTACATATTATACCTTT---AAGGCCCATCAATCATCTTTAAGAATTCACTGAATGTTAATC chr4 + 94230402 32636836 32636835 32637657 32636836 32636835 32637657 822 ACTAAAATTATTAATTAGCATTTCATTAGAAATATCAATATGGGAAAAACG-----------CAGTGATGTGCACACAACCTGCCTCTGGGATTAGATTTCAATTCATTTTAG-ATGAGGAGGCAATGATCTAAAACCTGACA----------------AGTT-AACTATCCTTACTGACACAATCCTGGATGGGAAT--AACATCAGCCCTAAGTACGGCACAGTAAGCAAAAAGAAATCACGCTAACTTCTGGC-ATTCACGAATGATTATGATAATAAGGATCTGAATG-------GGTTCCT------------CAAATTTGCT------TCTAT-------GAGAAT-----CTTGCAATTTTTAGTTG---------------TTTAGTTTTTAAATCAACGTCTACTTACGTAACGGTATCAAAAAGAGCAAATAGTTGTTACAGGCAGAACTGCACCGGCAAGAAAATTTAA-------CCAACAAAAGGGTTAATTAGGGATACAAATTTTCTCAGGCTGTTAATAATGGGAACAACACATAGTATGTGCCCATAAGTAATTCTCAGGTACCTTTGATCTCCAGCCCCAAGTGATCACTGGTGCCTACCACAGGCTGGCCTCTGGGACTCTCTCAGAACCAGACATCTGGCTACTTTGTTGTTTTAGACTAATCTCATCCCAAGGGAGCTCAAGAAATGACACCAGGCAAGGAGGGTCCTGGCAAGGGAAAAGACATTACAGTATCAGCAGATTTC----CAAGTGGACCGGAGTATCAAAATTGTCTTCAAATTTCTATGGGGAACCTATTGCCTC-CCTGCTCCCCAGCTCAGCTCTCACAC-----------GCAGCACACATGATCCCATTTCAAGGAACTGCTAATCTCTTTACGGAAGCTAATGAATGATAATC ..x.:....x...................x....:....:..::..:..x.-----------:.:.:.x:.:..x.:xx..::..x........x:x.:.x............-.xx....:..x:..........x:::x..----------------....-..x..:::x.:..x.x.x..----.:x.:.....--..x.x:...::.xx....--------------.x.x...:..:.-..::.:..::.-...x.:.x..:...x.:.:--.x..:.:.xx....-------:x...x.------------..x.:...x.------.....-------:.....-----...:x.:x...:.:.::---------------...x:...:.xxx.:xxx..x.::x:..x...::x.::xx......:x.x...-----.xx.::.....x.::..:--..xx.........-------....................:..x..............:................::.......x...........................:.........:........x.:.:.:x...x.........:..x..............................................................x.....:.:...............................................:............:..........----::.......x:...............:............::...:x.:..xx:x...-:...:..:x::.:.:x:..x.x:..x-----------.xx.:...:..x..x..x..---.:.:x.::::....x::..xx:...x::.x......x..... 51M11D51M1D29M16D4M1D20M4I10M2D18M14I12M1I11M1D19M2I14M7D7M12D10M6D5M7D6M5D17M15D53M5I18M2I13M7D278M4D57M1D26M11D20M3I42M 588/791 74.3% 822/94230402 0.0% 138/791 17.4% 113840767 76373788 +6809 chr4 + 190214555 146503843 146503842 146503942 100 ACTCACCTCATTTCCACCAACTGCCTTGGTTAAAATCACTGCAGAAGACACAGGCGGAGGCATGCAACCTACTGTCTGCAAACTGAAAAATAAAAGAAAA chr4 + 94230402 32662777 32662776 32662876 32662777 32662776 32662876 100 ACTCACCTCATTTCCACCAACAGCTTTGGTTAAAATTACCGCAGATGACACAGGAGGTGGCATACAGCCTACTGTCTGCAACCTAAAAACAACAACAAAA .....................x..:...........:..:.....x........x..x.....:..:..............x..:....xx.x..x.... 100M 85/100 85.0% 100/94230402 0.0% 0/100 0.0% 113841066 76373489 +11722 chr4 + 190214555 146509890 146509889 146510066 177 CACTTTTAAAGATTTAAACATACCCTTTTAAAAGCCATTCGTTGATGGGTGTGATTGATAAAAGCTGAAGAAAAAGCCATATTGTTGCTGGGAAGAATGCAAGAGTAAAGATCTGAATAAAAAGATGCAGTTTTAGATGCACCAAAGCACTGGTCAGCTCCTGGAAAAATTAAGGAA chr4 + 94230402 32667251 32667250 32667427 32667251 32667250 32667427 177 CACTCTATTATACTTAAACATACCCTTTTAAAAGCCATTCATTTATAGGTGTGATTGATAATAGCTGAAGAAAGAGCCATATTGCTGTTGGGAAGAACACAAGTGTAAAAATCTGGACAAAAAGGTGGAGTTTCACATGCATCAAAGCACTTGTCAGCTCCTGCAAAAGAAAAAGAA ....:.xxx.x.:...........................:..x..:..............x...........:..........:..:.........::....x.....:.....:.:......:..x.....:.x.....:.........x...........x....:xx..:... 177M 147/177 83.1% 177/94230402 0.0% 0/177 0.0% 113842639 76371916 +7256 chr4 + 190214555 146517026 146517025 146517140 115 AGATGACAGTACCTCTGTTTTCAATGATAGTCCACTGTTAAAGAATATTGTTGCAACAGCAATGTAGGATACAGTTATTTCTGGCTTCAGTGGTCCTAAAAAG-------AGAAAAAAGAGT chr4 + 94230402 32672337 32672336 32672458 32672337 32672336 32672458 122 AAATTACAGTACCTCTGTTTTTAATGAGAGTCCACTGTTAAAGAATATAGCTGAAACAGCAATGTAAGTTATGGTAATTTCTGGTTTCAAGGGTCCTAAAAAATACAGACAGAGAACAGAGT .:..x................:.....x....................x.:..x............:.x..::..x........:....:x...........:-------...:..x..... 103M7I12M 97/115 84.3% 122/94230402 0.0% 7/115 6.1% 113844689 76369866 +5589 chr4 + 190214555 146521582 146521581 146522008 427 GAGCCGCGGTGGAGCCGGCAGAGGTGCAGC------ACTTACCCCCATTCACCCCTATGGACGGCTCCAGTTTAGCTCCAGCGATCGCCAGCACTATTCCGACCATGAACCAGTCTTTCCTCATTCTCTCCAGCAGCCTCATATTTGTTAGGGTGGGTGGGTTTTGTTTATTTGTTTGGCTTTTTTTCTTTTCAAGCTCCGATCACCTAATCCTTGGAGCGTCTCCACACTTTCCTTGGTCCCTCCAGACATGCAGCAGAGCAAGTCAAATTGCCGATTGTAAAGTAAAGACCTGGGGGTTGCTCCGGCGGCTTTGAGGAGGGTTGGGAGTAGTAGTAGCCAGTGACAGGAAA-GTCTCACTGAGCGCCGCCATCACTACCACGCGCCTCAGAATACACGCGCACAAACGCCCC-CAGCGCCTCTGGCCGCGGGC chr4 + 94230402 32675092 32675091 32675419 32675092 32675091 32675419 328 GAGCAccgccggggccctccgggg-gcggcgggcggACTCACCGCCTTTCACGCCGACGGCGGGCTCCAGCCTGGCGGCCGCGATGACCAGCGCTATCCCCGCGATGAACCATTCCTTCCTCAGCCGCTCCAGCAGCCCCATG---------------------------------------------------------------------------GCGTCCC-----Tcgccgcggcccggcccggcgcgcctcagcgcag-------cgccggg-gcggggtgca-acccgccgcccgc-ccgccggc-------------AGGGCCAGCCGGATCCGCCGACAGGAAAAGTCTCACCCACCGCCGCCATCGCTACCACGCACCTCCGAGTAGATCCGC---GGTGCCACGCGGCGCCGCGAGCAGAGGGC ....xx..x:..:...xx.x.:..-..:..------...:...x..x.....x..x.:..xx........::.:..xx.x.....x:.....:....:..x:.x........x..:.......x:.x...........:...:---------------------------------------------------------------------------.....:.-----.:x..x:..:..xx..x.:.::..xx...x...:-------:....:x-.::::..:x.-...:.xx.x::..-...x....-------------:..:x:..:x.x.x..:x:.........-.......:x.x..........:.........:....x..:..x.:x...---:::...x.-.:.....x.x:..x.x.... 24M1D5M6I107M75D7M5D34M7D7M1D10M1D13M1D8M13D28M1I49M3D8M1I20M 219/320 68.4% 328/94230402 0.0% 115/320 35.9% 113846490 76368065 +3451 chr4 + 190214555 146542369 146542368 146542469 101 TCCCAGC-CTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGGTAGGTTATTTATTACTGATTAAATTTTGGAGCTAATTATTTGTATGTTCTGTGAATCAGTT chr4 + 94230402 87816923 87816922 87817010 87816923 87816922 87817010 88 TTCCAGCACTTCTGCTTTCTTTTTTTTATTTTCTTGTTTTGTAGGTTATTCATTTTTTGTTG------------AATTATGTGTAT-TTCTGTG-ATCAGTT .:.....-...:.x:...:........x....:...x..x..........:...x:.x:..:------------......x.....-.......-....... 7M1I54M12D12M1D7M1D7M 71/87 81.6% 88/94230402 0.0% 15/87 17.2% 58725446 NA +3249 chr4 + 190214555 146550171 146550170 146550221 51 TGACAGAGCAAGAATCCATCAAAAAACAAAAACAACAACAACAACAAAAAA chr4 + 94230402 41479762 41479761 41479809 41479762 41479761 41479809 48 TGAAAGAG---GAACCCCTCAAAAAACAAAAACAACAACAACAAAAAAAAA ...x....---...:..x..........................x...... 8M3D40M 44/48 91.7% 48/94230402 0.0% 3/48 6.2% 105070409 85144146 +8206 chr4 + 190214555 146551452 146551451 146551867 416 CCTCTCCATCTAATAGTTTCTCTGTCCCTTAAGTGGAAATCT-GTCTCAG----GAAATTAAGGGGAGAGAGGAGAGT-----------AGACAGTCGTGGAAGATAAGCTATTGGGAAGCACAGTAAATAATG-GAGTGAAATGTAGCTCGAAAGAGAGGGATCATTTAAGG-CTATTAGATGACAAATCCACTTCAATGCAGTTATTATACTTGTAAATATAGAAAAA-------TGATAATGTTGACAATTCTTCATCATACAATCTGTGTCATTAATAAATGATGAAGGATAGAAAGAGTAAAAGAAATAAAGCCAACATTCTGTGC--ATAACAATAGCACAGAAGCAC-TTGGAACAACTAGCTAAGCTAAAAACAAAGGCATAACTCGGTACCACTAATAAGGGATGACTGAGATAAAAAGACAAAATTCAAAAACA chr4 + 94230402 32681068 32681067 32681476 32681068 32681067 32681476 409 CCTCTCCCCTTGA-AGTTTCAGAGT----TAAGTGGAAAACTTATCTCAAATATGAAAGCAGGTTAAAAAAGAAAAGTGTAACAAGTGGAGTCAGGAAGGGAAATTAAG------------ACACTAATTAATGAGAAAAATATATAAACAGAAAGGAGGAGATTCTTTAAAAACTATTTAGTAATAGACCAGCTTCTGTGCAGATAT---ATCTGTCAATACAAAAAAAAAAAAAATCAGGATGCTGACAACCCTTCATCCCACAGTCTGTGGCATTAATAAATGATGAAGCATTAAAAAACTGG-------------GACACTTTGTGCCTATAACAATATCACACGAGGACAAGGGAATAA--AGCTGGAACAAAACAAAGGACATGATTGTGTATTGCTGGCAAATAATTATATAAATGAAAAACAAAACCACAGAAACA .......x::.:.-......xxx..----..........x..-:.....:----....x:.:.xx:.:.:..:.:...-----------..x...xx:x....:x....------------...x...x.....-..:x:.x..:..:x:x.....:::.:...:x.....::-.....x::.:.:.:.:.x:....x:.....x...---.::...x....:.:.....-------.x.x:...:......::.......x:...:......x..................x..x:...:.x.::-------------:...:.:.....--.........x....x:..x..-xx....:..--....:::x:....xx..:.:...:.:.xx...:::..:::..:x:..x.:xx.:..:....:xx...x:x..:..... 13M1D11M4D13M1I7M4I24M11I20M12D13M1I38M1I34M3D19M7I69M13D12M2I21M1I9M2D78M 256/381 67.2% 409/94230402 0.0% 63/381 16.5% 113870384 76344171 +12951 chr4 + 190214555 146574670 146574669 146575023 354 ATCTTCTGTCCAGTAGCTGTGTATATGAGTAGTGAGAGAGCCCCAAGTGAAATGCCCAGCAATAATCACTGCATATACATCAG-TCCCTAGTGAGCTGTATATTAATGTCTGCCTGGAAATTTAATGGCACCTCTAGGCATAAACAAAGGCTTATTAAAATAGTAAGTAAAATATTCCTGAACACTGGATTGCTTTTTGAATTTTCCTATTCTGCTTTTGGAAATTAAGAA-AGCCCATATTGTAATGCTAAAAGACACTGATTGAATCAACGCT---TGGCATCATTTTATTTAGGTTCTATTTTACATAGCCCAAAGCAAATAATCTACTTATATTTGTATTCAAAGATTTTTATTT chr4 + 94230402 32682987 32682986 32683334 32682987 32682986 32683334 348 ATCTGCCATCCAGCAGCT----ATCTGTGCATACAGCAAGCTTCATCTGAGTCACGCAGTAATAATCACTGCTTATATACAAGATCCCTTGTGTACTGTATATTAATGTCTGGCTGGTAATTTAATGGCACCTCTAGGCATAAACAAAAGTTTATTAAAACAGTAAGTAAAATGTTCCCGAAGACTGGCCTGCATTTTTAATTTT-CTACTCAGCATTCCAAAATACAGAGCAGCC----TTTTTATGCAAAAAGGCGGCTACGGAGTTAACACCAAGTAGCAGCGTTTTGCACAAGTTAGATAAAGCACGGCCTAGAGC-AATAGGATACTT-TATTTATATTAACAACCCTTTCTTT ....x.::.....:....----..x..x.:.xxx..x:...::..xx...:x::.x...:............x....:.:x..-.....x...x:.................x....x..............................:.:.........:............:....:...x.....x:...x....x......-...:..x..x..:x:....xx...:-....----..x.x....x.....:.:x:x.:x..:.:...:.:---.:...x.:....::x:.:...xx..xxx:..::...:.:...-....:xx.....-.....:....x.x.:x::...x... 18M4D61M1I121M1D25M1I4M4D35M3I42M1D12M1D25M 250/343 72.9% 348/94230402 0.0% 16/343 4.7% 113891683 76322872 +3897 chr4 + 190214555 146580040 146580039 146580211 172 ACAGAAGCATACTTATCTGGCAGGGGAGATACCATA-----TTCATGAAGTTGGTT--------TTCCAAGGGCCAGGCTTATCCATTGCACTCTGGATGTGCTGACCCCTGTGATTTGCCCACACATGGGAAACTTGACTGCATAATTTGTGCAGTGAGGGACTGCGTTCATGCTTTCCCCAGT chr4 + 94230402 11970781 11970780 11970956 11970781 11970780 11970956 176 ACCAACGCTTACCTGGCTGGCAAGGGAAACACATTACAGCGTTGTTAGAGCTCGTTGCCTTTTTTTCCA---------TCCACTTCTTGCACCTCGAGCACAACAACCCCTCTGATTTACCAACACGTGGGGAACCAGACTGCACAAGCTTTGGTAGCAGAGACTGTGTTCACATCATCTCCTGT ..x:.x..x...:.:x......:....:.:..xx..-----..xx.::..:.x...--------.....---------:::.:::x......:::.::::::x::......x......:..x....:....:...:x.......:..x:.x..xx:xx..:.....:.....::::x..:..x.. 36M5I15M8I5M9D107M 101/163 62.0% 176/94230402 0.0% 22/163 13.5% 134609259 55605296 +20853 chr4 + 190214555 146584650 146584649 146585074 425 TGAAAGAGGCTGATGCTGGGCAGAGTCTATGAGCTTTGCATATTCATA--TCCCTCAGTTGTTCAGCATTAGAAAATTCAGGTAATGAACATGTGAACACTCCAGCAGCCTTTGTATGGCTTGGGGGTTTTCTAGTCTCATGTTCTCTGTATAGAATTGACTGTGTCAAATCAGGAGGTCCCTACCCGCACCCCCAAATTGAATCAGCACTTGTACATTGAAGTTTTTAACATCACCCACAAGATTTTTAAGGGCTTGTCAAAAGAATCTTCATAGTCTCTAGCCATGAATAAAAATGAATTCAGATATCATCCCTATCTCATATTTTATTTCATGGGATTAATTTAATTCATTGAGTTAAATAATATGGGCTGTTAAGTAGTTGCTGGTAATAAGTAGAAATTTTTTAATTTTTTAGGAAAACATA chr4 + 94230402 32684976 32684975 32685384 32684976 32684975 32685384 409 TGAAGAAGAACGATGTTGGTCAGAGTCTGGAAGCTTTGCATATTCATACTTATCACAGTTGTTAAATGTTTGAAAATTCAGGTAATGAGCAGGC-AATACTCCTGCTGCCTTTGTACTGCTTGGGGGTTTGCTATTCTCATAATATCTCTACAGAAACCATTCTATCAAGTCAGG--GTTTTTTTCC----CCTCAAATTGAATTAACACTTGTACATTGAAGTTTTCAACATCACCCATAAGATTTTTC--GACTTGTCAAAAGAATCTGCACGGTCTCTAACCATGAATAAAAATGATTTTAGATATCATCTTTATTTCAAGTTTTATTTCTTGGGATTAATTTAATTGATTGTGCTG------GTGGCTTGTTAAGCAGCTGCTGA-AATAAACAG--ACCATTTGTCTTTCTGTGTAAACATA ....::..:x:....:...x........:x:.................--.x:.x........x.:::..x.................:..x.:-..:.....x..x.........:x............x...x......:x.x...x..:....x:x.:.x.:....:.....--..:::.x:..----..:..........:.:....................:...........:.........x--.:................x..::.......:................x..:..........::...:...x:.........x................x....x.:.:------:...x:.......:..:.....:-.....::..--.::x...:x:...:.:x.x....... 48M2I44M1D80M2D10M4D59M2D108M6D23M1D9M2D26M 321/407 78.9% 409/94230402 0.0% 20/407 4.9% 113899674 76314881 +3747 chr4 + 190214555 146585275 146585274 146585400 126 AAAAAAAAAAAAGTGGCAAAAAAAAATCTCAAAA------------------TGTTTT----AAGAAAGCTTACGAATTTGTGTTG---AACTGCGCTCAAAGCTGTCCTGGGCCACATGTGGCCTCTGGGCCACAGGTTGGACAAGCTTG chr4 + 94230402 45575600 45575599 45575745 45575600 45575599 45575745 146 aagagaaaaagagagatgaacaaaaacataaaaccagtaggatatgtgaccttgtttttgtgaaaataacacaccaatttaggttGCCAAATTGC-----AAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTG ..:.:.....:..x.:::..x.....:x.x...x------------------......----..:.x.:.x:..x.....:x....---..:...-----.......x.......x.......:..x...::..::.......:.x..:.. 34M18I6M4I24M3I6M5D51M 89/121 73.6% 146/94230402 0.0% 30/121 24.8% 101009675 89204880 +3652 chr4 + 190214555 146593543 146593542 146593625 83 CATGGTGGTGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--......:...........::........x.xx.x...xx:...........:..x.xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 70560346 NA +3378 chr4 + 190214555 146626140 146626139 146626220 81 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGACTCCTGGAAGTACAATTCAATGGAGAAAATGAACTCTTGTAAG chr4 + 94230402 83765965 83765964 83766038 83765965 83765964 83766038 74 TCCATTTAAACAAAACAAAAAAAAAAAAAAAAGAAGGATTTCTGAAAATATAA-------AAGAGAATGGCACTTTCTAAG ...:.:.x..x....x................:.....:.:...:..:..:..-------:...:....:xx::..x.... 53M7D21M 55/74 74.3% 74/94230402 0.0% 7/74 9.5% 62860175 NA +19723 chr4 + 190214555 146631559 146631558 146631863 305 TCTTGGTTAACTTCTCATTAGCAGTCTGCTCACATCTCATTCCCATTAAGAGTATTCCGTTTTCTTTGTCTAAAGTGTTGAGTGGTTATGAATAGTAAGGATAGACTATCTGTAATTATTTTTTAATTATTAATGGTTTTGTTAGATCCTTTCACTTTTACATTACATTTCTGTTAATGTAAGTTAAATCAAAATGTACTTCAGTTTCCAAGCTGTTCCCCAATGTATTTTTCATTCTTTCATAACATAACTTCAGGT-TTCTATGAGGTGTCTATGAAACAGCTTGCCTTTCAGGAGTCACCCTC chr4 + 94230402 32692918 32692917 32693223 32692918 32692917 32693223 306 TCTTGGCTGGGCCCTGCTCAGCAGTCTGCTCACATCCCGCTCACACGGAGAATATCCAGCTTCCTTTGTCTAAAGTGTTGAGTGGTTATGAATAGTAAGGATAGACTATCTGTAATTATTTTTGAATAATTAATGGTTTTGTTAGATCCCTTCACTTTTACATTAGGTTTCTGTTAATGTAAGTTAAATCAAAATGTACTTCAGTTTCCAGGCGGCTCCCAAACGTATTTTTCATTCTTTCATAACATTACTTCAAGCACTCGATGAGGTGTCCGTGACCAAGTCGGCTCCCGAGCCGGCAGCCTC ......:.::x::..xx.:.................:.::..x..:x:...:...:.x.:..:............................................................x...x.....................:...............x:...........................................:..x.:....x..:........................x......:.:-:..x..........::...xxx..::x..::::x..xx.x..x.... 258M1I47M 252/305 82.6% 306/94230402 0.0% 1/305 0.3% 113938641 76275914 +12246 chr4 + 190214555 146632702 146632701 146632885 184 CACTGAACACAAAAGCTACTAAAAATGACTGGATAAATTATGCAGAGGGATTTCTGGATTTCTTTCAAGTAATTAAGTTTCGATTTCTTGCATTTATTTTAGTTCTAGGAAGCGCAAGGCGCCATGGATTGC-AAAAGTCTTCATTGATTGTTACAATGCTTTAAGTTTGATTTCGTGACTGGAC chr4 + 94230402 32693440 32693439 32693623 32693440 32693439 32693623 184 CATTCAACACAAACGCCGCTAAAACTGCCGGGATAAATTATGCAGAGGGATTTCAGGATTTCTTTCAAGTAATTAAGTTTCGATTTCTTGCGTTTATTTCAGTGCCAGGAAGCACGGGGCGCCACGGATGGCAAAAAGTCTCCATTGATCGTTCCGG-GCTGGAAGTTTGATTTCGTGACCGGAC ..:.x........x..::......x..x.x........................x....................................:.......:...x.:.......:.::.......:....x..-........:.......:...x.::-...xx.................:.... 132M1I24M1D27M 157/183 85.8% 184/94230402 0.0% 2/183 1.1% 113939262 76275293 +45691 chr4 + 190214555 146635632 146635631 146636877 1246 CCGTATTTACCATATGAAGTGGTGACAAGTGTTTAGCATTTTGGAGATCAGTTGTCAGTTACTATTAAAATCAAGATTAATTCATATTAACGATATGCATTTCTCAATACTCCCAGGTGACAACATACATTAAAACAACTATTGCAAGTAATTAAGCTCAATGAAGGGGGAGGGGACAGAGGGAGGTTCAAAACACCCCA----AATATTTGATTTTCAATTCAAGTTC-AGCAGACTGTTG--CCACAATA--ATGCTCGGGAAAC----TCCTCAGGGTTACTTTTTACTTTACATCTAATTAGGCACCTAATGAAAGAGAAGAATTTTTTCCCCATGTGGCTTTTCTCCTTGATATTCTTGTGCCTTTATTTAAACACATAAACACACTATTTAGGAGTGGCAATACCCAAAAGTTTCTCATGTGATTAACTTGCTATAATAATCTGGGGGAATTAGAAAGAAGAGGAC--ATTTGTCTTCCGGTTATTTTC-CATCTTCACTCTCACTTTGGCCCTTTG-GCCTTTACCCAGTACGGATAGAAAATACACCCAAAATATT---------------TTTATGG-ATTTTTTTATTAGGCTTTAAAGATGCTCAACAGTTAATACTAATTAGACCATCCAAA-GCCTTTTGAAGATTAAGCAAATTGGACAACCCTTGTTAATTAGAACATAATTTGAAGTTTGAAATTATATCACTGATGAAGTAGTCTAATTAGTATGACGATATGTTAATGGACCAGTGAGACATAGTGCCGATAGAGTTTGGCATGAACCTCTTCACGGCTTGC-AGGAAATCCTCCCTCCTATACCGACATTAATAAAAGATTTCTATAGACTTCAGCCTTTCCACGATGACATACAATTTATAGTACACACAATGCATTAGCTCATAGTACTGCTCAATTTTTTCACTATTATGAAAACTAATAAATTCGTCAAGCTGAATTAAGCATACAAATCAGATGAGGCATAGCAGATTACACAGTGAAGCGCGGTGTCTCCCGAGCCTAAATGAAATTTCAATCTAATAATTCCTTCCTGGCCCAGTCATAATTTGTTTAGAGATGTTGTTCTACTTCTTTCAAAGCGCTATTCGCACTATAATTAAATGATACTCAAGCTTTTAACTTTGATTTATTTCATTTCTTGAAGCTTGAGAC----AGAGCTG-TACAATGTCATTTTTTTTTTGTTTCCTTGAAAATTACTCTGGCTGTTGTTGAGGT-AGAAATTAAACACCTAAGCACTTACTTGAACCGTCC chr4 + 94230402 32694781 32694780 32695947 32694781 32694780 32695947 1167 CCGTCCCGACCGCGTGGGGCGGCGGCG-GTGCGCGGCGGTTTGCGGAG-AGCTGTCAGGTGCGATTACGATCCAGATTAATTCATATTAACGATATGCATC-CTCCGCGCTCCCATGTGACGGCATACATTAGAACAACTATTGCGAGTAATTAAACTCAATGCGGGAGG--------------GGTTAAAGATACGTCGTGGGGAGATTTGATTG-CGATGGAACTCCTCGCCGAC-GTTGAGCCGCAGCGCGAGGCGCGCAGAGCCCTCTCCTCGAGGCCGCCTTCCCCCGGAC-----------CGCCCGGCGGA-GCGAGGTATTTCTGCCCC---TTTCTTTGCTTCTT-------------------------------------------------------CCCGGAAGG----CGGGGGGTC--CCCGCCGCGGGGCTCGGGG--------CACGGCGAGGGCCGAGCTGCGGCCGGggctcctgcgcggctctgcgc-------ggctctgcgcggctctgcgcggGCCGTGGGGGGCA-GCGCCCGGAGCCCCGCGGAGCCCGAACGGTTCACGGCGGAGTTTTGTCGGGCGTCGGAGCGGCTCGGCGGTTCGGGCTGATGAGCCGAGCGGAACGGCTTCTGAAGATTAAGCAAATTGGACAACCCTCGTTAATTAGAACATAATTTAAAGTTTGAAATGATATCGCTCACGAAGTCGCCTAATTAGCATGGCGGCGTGTTAATGGCCTGCTGAGACGCGGGGCTG--------CGGCGTGAGCTCCTCGAAGGCTCCCGAGAAAATCCTCTTTCCTGTGTTGTCATTAATAAAAGATTTCTATAGACTTCAGCCTTTCAACGGTGACACACAATTTATAGTACACACAATGCATTAGCCCATAGTGCCGCTCGATTTTTTTACTATTATGAAAACTAATAAATTCGTCAAGCTGAATTAAGCATACAAATCAGATGAGGCATAACAGATTACATATTGAAGCGCGGTGTCTCCCGAGCCTAAATGAAATTTCAATCTAATAATTCCTTCCTGGCCCGGCCGTAATTTGTTTAGAGATGTTGTTCTACTTCTTTCCAAGCGCTATTCGCACCATAATTAAATGATACTCAAGCTTTTAACTTTGATTTATTTCATTTCTCCGAGCCGGCGACAGTGAGAGCTGATACAATG-CAATTTTTTTCTATTTCCCTTAAAATTACCAACTCTGCTGTTTAGGTGAGAAATTAAACACCTAAGCACTTCTGTTAACCTTCC ....x::x...:::..::.:..:.:.:-...:x::..:x....x:..x-..:......x.:.x....x:...x...........................:-...x:::......x.....::.........:............:.........:.......x:..:..--------------....x..:.:..x:.:----:.x........x-.:..xx..x.:.-x..x...-....--..:..:::--.x..x..x::.:.----.....::..:::.:..::x.:xx..-----------.:..::::.:.-.x..:.x....:.x....---.xx....x..:...-------------------------------------------------------...::...x----.:x.x.:.:--.::..:::::x:x..x...--------x.x.:x....:.--.x:..:xx:.x..x:x::.x.-.:x..:::.x.-------...:..x:.-.x..:.:.x.:.xx..x:x:.::x.-:.:...::.::x::---------------..:.:..-:xxx....:.::...x.:::..xx....::.:...x:x:..:..x..x.x.x.x:..-.x...:...........................:...................:...........x.....:..x.:.....x.:........:...:..:::.........x.::x......:::.x..:.--------:...:...:.::..:x.x....:x.-..:........::....:.:::.x...................................x...:.....:.............................:......:.:....:.......:..............................................................:.........:.x............................................................:.:.:.................................x...............:...............................................:x:...:x.x...----.......-.......-..x.......:.:.....:.x........:xxxx...:....x....-.......................x:x.x....x... 27M1D20M1D52M1D68M14D16M4I12M1D12M1I7M1D4M2I8M2I13M4I25M11D11M1D18M3D14M55D9M4D9M2D19M8D12M2I21M1I11M7D9M1I25M1D14M15I7M1I57M1I132M8D25M1I372M4I7M1I7M1D47M1I36M 851/1126 75.6% 1167/94230402 0.0% 161/1126 14.3% 113940851 76273704 +4401 chr4 + 190214555 146638701 146638700 146639238 538 GAGCAG--AAAGGACTCAAGCCTGAGGGGAGTAGAGAGGAAGAAGGGGCAACGCGAGAAACCGAACAGGAGCCGGCGTTTCCTGGCAAGGGAGGGCGGAGGCGCGCGGGAGAG-AGGGAGAGAGGGA-----------GGGCGGGGGGCGCGGGGGTAGGCGCGGGGAGAGGGGAGTATAA----------------------------------CTCGCCGGCCGCGAGGAGC------------GGGGGCAGTTTCGGGTGCCGAGGTCTGCAGCTAGCGGCAAGCGGAGTCAGGCATCCGTTCAGACTGACAGCAGAGGCGGCGAAGGA--GCGCGTAGCCGAGATCAGGCGTACAGAGTCCGGAGGCGGCGGCGGGTGAGCTCAACTTCGCACAGCCCTT----CCCAGCTCCAGCCCCGGCTGGCCCGGCACTTCTCGGAGGGTCCCGGCAGCCGGGACCAGTGAGTGCCTCTACGGACCAGCGCCCCGGCGGGCGGGAAGATGATGATGATGTCCCTGAACAGCAAGCAGGCGTTTAGCATGCCGCACGGCGGCAGCCTGCACGTGGAGCCCAAGTACTCGGCACTGCACAGCACCTC chr4 + 94230402 11181330 11181329 11181855 11181330 11181329 11181855 526 GAGCAGTGACAGGATCCGGGCGTGGGGGCACTCAGAGGGAAGGAAATGCTACG-------------AGGTGATGCTGCGTGCGGGTGCGGATGGATGGAGAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAAGTTGGTGAAACTTTTCCTTATTTCTCTCTTCGCTTATCCCAGGGTGCCTTTTTTGCCTTTGGGAGAGTGGAGGGGGCCCAGG-------CGGGGGGTGAGCGGAGT------------------GGCCACGGGGCGGGCGGAGGGAGGGGCCTGGCGAAGCCTATCCAATGAGCGTccggggg----ggcgggggggccgggcT--ATAATGCCCTCGATGCCGGGCGGCAGAGGCAGACAATACCGCGCCCC-CGGAG---CCGGGCAGCCCGGA-------GCGCCCCTGC---CCCGCTCCCAGCC-----------CAATCATGATGTCCATGAACAGCAAGCAGGCTTTCAGCATGC------ACCCCATCCTGCAC---GAGCCCAAGTACCCCCACCTGCACACCAGCTC ......--.x....::.::..x..:...x.x.x::::.....:.::x..x...-------------...x.x:.x:.:x.x.x..::x..:x..::....:x....x.:..:.-.x...........-----------:..:...::::..:.:::x..:x:x.:::...x:.:.:x.x..----------------------------------:....:x::.x.::..x..------------x...:x...xxx...x...x...-------.x:.x..::........------------------.:.x:.:.:.xx....:...:--.x..x.:..x:..x::.xx.:xxx..x......:..----......x.:..:x::..--::.xx.....:----..x:..xx...xxx.:.x::::x.x..:.::.-.....---..x.......x...-------.:...:..:.---..x..x...x.x.-----------::..x.........x................x..:.......------:.xx..x.......---............:.xxxx.......x..x... 6M2I45M13D47M1I13M11I43M34I19M12I23M7D17M18D21M2I36M4D17M2D11M4I32M1D5M3D14M7D10M3D13M11D42M6D14M3D32M 293/460 63.7% 526/94230402 0.0% 144/460 31.3% 135457371 54757184 +36299 chr4 + 190214555 146640338 146640337 146641674 1337 GACCCGCGGGACCTGGAGGCATTCGCCGAGCGCTTCAAGCAGCGACGCATCAAGCTGGGGGTGACCCAGGCAGATGTGGGCTCCGCGCTGGCCAACCTCAAGATCCCCGGCGTGGGCTCGCTTAGCCAGAGCACCATCTGCAGGTTCGAGTCCCTCACACTGTCCCACAATAATATGATCGCGCTCAAACCCATCCTGCAGGCATGGCTCGAGGAGGCCGAGAAGTCCCACCGCGAGAAGCTCACCAAGCCTGAACTCTTCAATGGCGCGGAGAAGAAGCGCAAGCGCACGTCCATCGCTGCGCCAGAGAAGCGCTCGCTCGAAGCCTACTTTGCCATTCAGCCTCGGCCCTCCTCTGAAAAGATCGCCGCCATCGCGGAGAAGCTGGACCTGAAGAAAAACGTGGTGCGCGTCTGGTTCTGCAACCAGAGGCAGAAACAGAAAAGAATGAAATATTCCGCCGGCATTTAGAAGACTCTTGGCCTCTCCAGAGACGCCCCTTTCCTCGTCCGCTCTTTTCTCTCCTCTCTTCTGCCTCTTTTCACTTTTGGCGACTAGAAACAATTCCAGTAAATGTGAATCTCGACAAATCGAGGACTGAAGAGGGAGCGAACGAGCGAACAACTGAGCCCAAGCCGGTGAGAATGTGAAACAGTTTCTCAAAGGAAAGAATAACAAAAGATGGTATTTGTCTGTTGTAGCAAAGTTGTCCCTTTGAACCCCACCTCGGCTTCTTCAGAGGAAGTGTGGAGATGGCTGTTTGCAGGAAGGCAGACGAGACAGTGTTTAAAAAGTCCACAAGAATGATCAAGTAAGATTTGTTTTTATTCTTACAGACATCACCCGTGTTCAAGTTTAAAAGTACACTTTGCAACTATTTTTCAGAAATAGAAATTGATTCAGGACTAAAACTTTAAACTAGAGT--TGATGCTTAATGTGATAGAGACATCTCTAAAGTATTTTGAATTTTAAAAAAAGATGGCAGA-TTTTCTGCATTTACACTGTATAT----------TATATATATATTTTTATTGTGGTTCTTACCCCCTTTTCCTTCTCTGAAGTGTTAATGCTTAAGAAAAGAGTTGCGCCTGCTGTGTTCACTGATCTTGAAAGCTATTATTAGATTATTGCAGAACAACCCTCTGTAAATTATTAATTTATCTCTCTAGCAACTTAATTTTGTGCACATTCTAATTAATTAAACTTCTTCCGTCT----------------------------------AAAAAAAGTGGGGGAAATGTATAGCTAGTAACGTTCAAAAAATTTTGTTTGATGAGTTTACCGAATTTTTACAGCTTTCCTCCTATACTGTGTTCCTTTTGACCCATTTGTATATTCTCACTTGA chr4 + 94230402 32697934 32697933 32699000 32697934 32697933 32699000 1067 GACCCGCGCGAGCTGGAGGCGTTCGCCGAGCGCTTCAAGCAGCGCCGCATCAAGCTGGGGGTGACCCAGGCCGACGTGGGCTCGGCGCTGGCCAACCTGAAGATCCCGGGCGTGGGCTCGCTCAGCCAGAGCACCATCTGCCGCTTCGAGTCGCTGACGCTGTCGCACAACAACATGATCGCCCTCAAGCCCATCCTGCAGGCCTGGCTGGAGGAGGCCGAGAAGTCGCACCGCGAGAAGCTGGCCAAGCCCGAGCTCTTCAGCGGCGCCGAGAAGAAGCGCAAGCGGACCTCCATCGCCGCCCCCGAGAAGCGCTCGCTCGAGGCCTACTTCGCGCTGCAGCCGCGGCCCTCCTCCGAGAAGATCGCCGCCATCGCCGAGAAGCTCGACCTCAAGAAGAACGTGGTGCGCGTCTGGTTCTGCAACCAGCGCCAGAAGCAGAAGCGCATGAAGTACTCCGCGGGCATCTGAGCGCTGCCCGG----------------------------CGCT------------------------------------GCGGCT------------------------CCGCGG------GACGACGGGAGGAGGAGAGGGGGAGGCGGCCGCCGGGCCGCAGCCGG-----AGGTACCGCGGGTTc-----------------------------------------------------------gccccgccgcgccc---------ggggccTCGGGACGG---------GGACTGCCGGCGGGA--------------GCCGCGAG--------------------------------AGACGTCTCT--------------AAAGTA--------------TTTTCA----------------------------TTTAGATAAGAATAATAATGATAaaaaagaagaagaa------gaagaa----gaagaaaaaAACACAAAGGCAGGCTTTTCTGCATTTACACTGCGaattataaatatatatatatatatttttaCTGTGGTTCCTGCCCCC---GCCCGCCCCGAAGTTGTGACGC-TGAGGGAAGAGCCGC----------TCCGCCGCTCCTCGGAGCCGCCGGTAGATTGCCGCCCGACAGCCC-CTGTAAATTATTGATTTCTCTCGCTGGCAACTTCATTCCGTGCTCATTCCAATTAATTACACCTCCTCCATCTAAGTCTTGAGAACAGTTaaaaaaaaagaaaaagaaaaaaaaaagaaaaaaaaaTTTGCTTAGTGAGAATCAAATATTTTGTGTTGGTAGCATCGATGAACGTG---AGCTTTCCTCCCCCGCCCT-----------CCCCTCTGTAAATTCCCACCCGA ........x..x........:.......................x..........................x..:........x..............x........x..............:..................x.x........x..x..:.....x.....:..:........x.....:..............x.....x.................x..............x:.......:..:.......::.....x.................x..x........:..x..x.................:........:..xx.x.....x...........:..:.................x........x.....x.....:..............................x.x.....:.....:x.x.....:..:.....x.....:.:::x.x:x.::..----------------------------....------------------------------------...:..------------------------:.x..:------..x...x.:..::....x.::x...xx::.x:.:.:...xx......-----.x..:xx:.:.x...-----------------------------------------------------------:....:..x..x.:---------.::.:x.x.:..:..---------...xx..x.:..:..--------------x..:.:..--------------------------------....:..x.:--------------......--------------......----------------------------....:.:x...:.--.:...x.x..x:x..x::...x------:...x.----...xxxx....x.x:.x.....:-..................::x..----------................:........:.:.....---x..:x.:.:.....xx.:.:..-.:..::.....::..----------.:.:.:.x..:.x::...:::::x......:::..xx:...:...-............:....x....x..:.......x...::....x.....:.........x..:..:...:...----------------------------------.......:x.::::...x:.x.:x:....:.x:x.....x.x...xxx...:.::xx.::x:...:x.x---...........:x::.:x.-----------...x.:....x....:...::.. 482M28D4M36D6M24D6M6D47M5D15M59D14M9D15M9D15M14D8M32D10M14D6M14D6M28D13M2I22M6D6M4D23M1I23M10I33M3D22M1D15M10D45M1D73M34I69M3D19M11D23M 777/1020 76.2% 1067/94230402 0.0% 364/1020 35.7% 113942404 76272151 +21678 chr4 + 190214555 146653154 146653153 146653402 249 CTTCGCTTTTCAGTTTATACAGAACAGAATCATTTACATAAAGTCCTTAAGGCAAATAACTGTTGGGGCTCTAATTTATATCTGATCGAAAATTAGCCGTCATTATGCGCTCCATTAGCAGCGTCTTTAATGTGCTTCTAAGCACCATTTGTCAAGTGGCTTGTTAATATCCTTCAAGTCTTTAAAGTTGAGAGCTCATTAAAGAGTGCGCTCTGTTATTGATGTAATTTAGATGAGTTTGGAAGAGCA chr4 + 94230402 32701602 32701601 32701850 32701602 32701601 32701850 249 CCTTGCCTCCCCGTTTGTGCAGAGCGGGATCATTTACATAAAGTCCTTAAGGCAAATAACTGTTGGGGCTCTAATTTATATCTGATCGAAAATTAGCCGTCATTATGCGCTCCATTAGCAGCGTCTTTAATGTGCTTCTAAGCACCATTTGTCAAGCGGCTTGTTAATATCCTTCAAGTCTTTAAAGTCGAGAGCTCATTAAAGAGTGCGCTCTGTTATTGATGTAATTTAGATGAGTTTGGAGGAGCA .:.:..:.::.x....:.:....:.:.:................................................................................................................................:...............................:......................................................:..... 249M 235/249 94.4% 249/94230402 0.0% 0/249 0.0% 113951552 76263003 +3347 chr4 + 190214555 146656857 146656856 146656979 123 CATTATATATATATATATATGTATATATATATATATATATATGTATATATGTATATTTATATATATATATGTATATTTATATATATATGTGTGTGTGTGTGTGTGTGTGTGT-----------GTCTTTATGAA chr4 + 94230402 89812944 89812943 89813076 89812944 89812943 89813076 133 CAGTTTATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAA ..x.x.....:.xx:.:.x...:-::.....x...x....:.......x.:x..:::.xx...:..:.:::x.:x:::..:::...:.x:x.............:.:.:...-----------..:........ 23M1D88M11I11M 78/122 63.9% 133/94230402 0.0% 12/122 9.8% 56843913 NA +3819 chr4 + 190214555 146656868 146656867 146656972 105 TATATATATGTATATAT---ATATATATATATATGTATATATGTATATTTATATATATATATGTATATTTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTCT chr4 + 94230402 89812949 89812948 89813056 89812949 89812948 89813056 108 TATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCT .....:.xx..:.x.:.---.....x...x......:.....x..x..x:x.xx...:..:..:.x.:.:x:..:::.....x:x.............:.:.:..... 17M3I88M 72/105 68.6% 108/94230402 0.0% 3/105 2.9% 56843919 NA +3020 chr4 + 190214555 146656901 146656900 146656995 95 ATATATGTATATTTATATATATATATGTATATTTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTATGAAACTGGAGATCTGCTCC chr4 + 94230402 22600202 22600201 22600296 22600202 22600201 22600296 95 ACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAATCCTGATCTGCTTC .:....x:.:..x:.x.:.:..::..::.x.xx...:.....x.........:.:..::..:::..:x..xx.x:.....x.xxx........:. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 124056699 66157856 +3051 chr4 + 190214555 146676313 146676312 146676368 56 TCTTCTTCCTCTTCCTCTTCTTTCTTTTCCTCCTCCTCCTCCTCTTCTTTTTACTT chr4 + 94230402 36924292 36924291 36924347 36924292 36924291 36924347 56 TTTCCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTT .:.:..x:..:.x:.....:x..:..............:.:...:...x....:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 109752021 80462534 +3121 chr4 + 190214555 146686471 146686470 146686517 47 ATATGTATGTCTATATGTATGAATGTGTGTGTTTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG ....:..:..x:...:....::..........:...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 139828861 50385694 +3045 chr4 + 190214555 146708323 146708322 146708377 55 TATATATATATATATATATATATATATATATATACACATGTATGTGTGTGTATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:...::...:...:.:..:.:.:...:.:...x.x......:......:..... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 91013869 NA +28950 chr4 + 190214555 146710999 146710998 146711527 529 AGGATGAATTGAAATGGAGAAGACATTACCTGGTAGTTTGGGGACTGGAAAGGTAAATGAATTTTTATAATTTTGGCATGCTAAACATTTGTAGTGGCCTTACTCTA------AAAAAGGGTAAATAACTCATTCATAAAGGTTGTGTCAGAGTTTATAGACTAGA-CCCCTGGTAATGGATTCAACCTTTCTTCAACAAACCAAAAGTATTGTTGTATGCTCACATGAATATACAGTAGTCATTACCTTAAATTTAAAACTCACTATAAGCAGCAAACACAGAGAGCATGATATGAAGGCTGTATTGTATCAGTGTGGTCTGCAGAGAATTTCTTCATATGGTTTTTGCCTTGTTGAAATATATGTTGCAGTTCAAAGCTAAAGGGATTACTTTTGAATAGTCATCACAGAGGTTGATTACATTCGTATATCATATTTAGCTGGACCCTGCAGGCTATTATTCCATTAGCTACGCCGGTCCTGCCATTGTCAAAAAGTTGATCACCTAATGTTAAAAGACTGTGCTTTCTGTTGA chr4 + 94230402 32713613 32713612 32714139 32713613 32713612 32714139 527 AGGTTCACTTGAAAGGAAGGCAGTTGTACTCAGAGGTTTTACGAATATAAAGATTAATGAATTTGTACAATTTGGGCATGCAAAGCATATTTATCAGGCATATTCCATTTAGCATAAGCAGTAAAC----CATATATAAGGGTTGTGTCAAAGTTTACTGAATAGGGCCCTTGGTAGCTGGTGCTACATTTCTCCAACAAATCAAAGGTATTGTTCTATGCTCACATGAATATACAGTAGCCATTACCTTAAATTTAAAACTCACTGTGAGCAGCAAACACACTGTG-GGGATATGAAGGCCATATTGTATCAGTGGAGTCTGCAGAGATTTTCTTCATATGG-CCTCGCCTGGTTGAAATATATGTTGCAGTTGAAAGCTAAAGGGATTACTTTTGAATAGTCATCACAAAGGTTGATTATATTCGTATATC--ATTTAGCTGGACCCTGCAGGCTATTATTCCATTAGCTGTGCTGGCCCCG-CGCTGTCAAAAAGTTGATCATATAATGCAAAAAGGTTACATGCTCTGTTAA ...x.x.x......x.:..:x:::xx...:::.x:....x:x..x.:x....:.x.........x..:.....x.......x..:...x.x..x::.x.x..:..:.------.x..:x:.....:----...x:....:..........:......:x..x...:-...:.....::x.:.x.x..x.....:.......:....:........x........................:.........................:.:.............xx.x.-:x...........::.............x:...........x.............-::.:....x.....................x...................................:..........:...........--.....................................::..:..:..:.-.::.................:x.....:x.....::.::::x:......:. 107M6I13M4D36M1I120M1D55M1D89M2D49M1D51M 416/520 80.0% 527/94230402 0.0% 16/520 3.1% 113997386 76217169 +54826 chr4 + 190214555 146719571 146719570 146720690 1120 TGCAGCAAACCTATTTAGTTCTTAATAGTTGTTTGTCTATTTACTTTCTTGTCTTTTAGA-GACCATTCCTAATGCAGCAGTTAAGAAAAAAGTC---ACATACTCCAGGGATCTTCCTGAAAACCACTAATCTGACATGTAGGCTATGACAACTGAGATTGGCCTAGTGAGAAATCAAATCTAGGGTTTCCATCATGTAAGTTGTTGTCTTTATTTCATTATACTTTGATTCAACCCCTAATGGATTCAGCTTCATAAAGTCAGAAAAAGAAAAAAAAAGCAATTTATTCATGTTTTCATTGGAGCTCACTGCAGTCATGAAATTTCTCTAAAAATGCAAATCATTTGGTGCCACGTAAGTGAAACTTGGTAGCTAAAGTGCTTAGAGGAAAATGCTTTCCCAGGGCTAATGTTTTCATGCCCAGTGATTGAATAAATCGATCCATTTATTACAACATCTTCACTTAAGATTTTGTCCCTAGATGAATGTGTCTAAGAGTACTAGAAGACTTTTCTTTATCACTGAGAAAATTGATTACACTTGTTAATTTGGCTTTTAATCCTAGATATATAAAAATAAATACCATAAACATGTGTAGAAGAAATCAATATAGATCTGTTCAATATCAGATTGATCAAAA-AAGGATTTAGTAAGACTCTAAGATGTAAAATACTAATGTACAAACTAAGCCCTTACTTATGTAATACGACTTTAGACGAGCTCAGTATAAACCTAAAAGAAACTATTCC-TGAAAACAGAAATGGTATACTTTTCTTGCATTAAAGAAAAACCCCCAGAAGGCCTACC---------TATCCAAGGTATTTAATGTGAACATTTGTTTTTAAAAGATTTCTTGTCTTTGGTCCAGCCACTGTTGTTAATTCATGGGGCATCATATCACAGA----------ATTTTTATGTTACGTAAAGCAAAAATTACACTTAACAAATGTAAGGTTAAGTCATAAAAAATAGATAAAACAACACTTCTAAAAGCCAAGATATGACATGGAAAGGCTATCAGTCATTCTTTTCAGAGAAAGTGAGGACAATGAGAAATAAAAAT--------AATATTCAAAGACTCCTGAAATGCCACTTAGACTGGCTCTGGCCCATTATGTCATGTGTTTTGTAG chr4 + 94230402 32719780 32719779 32720910 32719780 32719779 32720910 1131 TGCCGTGGCTCTATTTAATTCTTAATCTATGCTTCTCTGTTTAATTCCTAGCTGCTTGGAAGGCCTGTTGCAACAAAGCAGTTAAAAAAAACATCTGTATGTACTGTTGGG-TCTCCCCAAAGAGCACTAACTTGACACGTGGGCCATGACAGCTGGGCTTGAACTACTAAGAAACCTAATCCAGGGTTTCCATCATCTCAGTTGTTGCCTTTCTTTCATTAGTGTTTGACTCAGCCCCTAATGGATTCAGCTTTATAAGATCAGAAAAGAGGAAAGAAAGCAATTTATTCATG-TTTCACTAGAGCTCACAAAAGACATGAAATTTCTCTAAAAATGCAAATTGTTTTGTGCCACACAAGTGAGACTGGGCAGCTAAAGCTCTTAGAGGAAGGCCCTTTCCCAGGGCTAATGTTTTTACACCCTGTGATTGAATAAATCAATTTCTTTATTATCACATCTCCTTTT--TTTTTTTTCTTCACAAGAATGTAAGAAAG-GTACCCAAGCATCCTTTTTAATT-CTAAGAAAATTGATTATGCGTGTTAATTTTGTTTTCAATCCCAGACATACCAAAACAAACACTATAATCATATGTAGCAGAAATCAAT----CTCTCTTAAGCATCAAGTTGGTAAAAACAAGGATTTAGTAAGAATCCAAGATGTAAAAGACTAATGTACAAACTAAGCCCTTATTTATGTAATGTGCCTTTATACAAGCTCAATATAAACCCGAAAGAAACTATTTCATGAGAGCAGAAATGGTTTACTTGCACTGCATCAAAAATGA--CCCCATAAGACCTCCTTTACTGAGATAGCCCAGATATTTAATGTGAACATATGTTTTCAAAGGATTTCCTGTCTTATGTCCAGTCATTCTTGTTAATTCATGGGACAGCATACTGCAGATGTGCTCTTTTTTTTTATGTTACATAAAGCAAAAATTACATTTAACAAGTGTAAGGTT-GGTCataaaaaataaataaaaatataCTCTTAAAAGCTGGGAAATCACAAAGTGAGGCTATCAGTCATTATTATTGAGAAGGGCGAGGACAATGTGAAATAAAACTTGCACATCTATGAACAGACATTCCTAAAATGCCA---------GCACTTGGCTGTTATTTCACATTCTCTATAG ...x.:::x:.......:........xxx..:..x...:....x..:..x.::x:..:..-.:..xx.:x:..::x.........:.....x:..---.::....x:x...-...:..::..:.x......::.....:..:...:......:...:.x...:x...x.:.....:.x....:..............x.x........:....x........xxx.....:...:...................:....::........::::...:.................-.....:.:........x:x..x..........................::...x.......::......:...x..:........:x..........:::x.....................:.::...x...............:..::x.......:x......:.x:..--xx....x..:::.x.x......:xxx...-....:x:.:x.:::..:..x..:-..:.............::.x.........x.:...:.....:...:...:x....:...:..:....x...:.....x..........----x...x..x.::....::...:.x....-...............x..:...........x........................:.........::.x.....x..:......:........::............:.-...:.:..........x.....x:x:.....:...:.x:.--.....x...:...x.:---------..x..x..:................x......:...:......:......xx......:..:.x...............:..x....:::....----------x............:................:.......:.........-:.............:......xx.:...::.......:::..x..x...x:.x:...............x..x.:::::.::.:..........x.........x.--------x..:xx..:.x.:....:........---------..x..x.x.::....x...::.x:.:.:... 60M1I34M3I13M1D182M1D172M2D29M1D23M1D88M4D27M1I109M1I40M2D16M9I94M10I48M1D106M8I26M9D31M 844/1098 76.9% 1131/94230402 0.0% 55/1098 5.0% 113999791 76214764 +3357 chr4 + 190214555 146728691 146728690 146728869 179 AAATACTGGGTACTAAAATGTATGTGTGTATGTGTATATATGTGTGTATAACTGTCCAG--AGGATATATGTACATATATATACACATATATATGTGTATATATACGT----ATATATACACATATATATGTGTATATATACATATATATACACATATATATGTATATATATACACATATATATG chr4 + 94230402 21109122 21109121 21109297 21109122 21109121 21109297 176 AATTACTTGGTGATGAAATGTCAAAGCATCGGTGTATGGGC-TGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTC--------GTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..x....x...:x.:......xx:x.::.xx......:x::-..x.::..x...xxx.:--....x..x..:x:...:..:.::::x.x.:.:x.:....x....:..----.:......x.--------.....:x.....:...:..:x..:::x.x.:.......:.:..::x....::... 41M1D17M2I47M4I10M8D55M 105/170 61.8% 176/94230402 0.0% 15/170 8.8% 125619569 64594986 +3077 chr4 + 190214555 146728762 146728761 146728882 121 CATATATATACACATATATATGTGTATATATACGTATATATACACATATATATGTGTATATATACATATATATACACATATATATGTATATATATACACATATATATGTGTGTGTATATAT chr4 + 94230402 76376857 76376856 76376972 76376857 76376856 76376972 116 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGA-----AAATGTGCCTCTCTGTGTGCTTGTTTACAT ...::...:x:x:x..:.....::x.x...:.:....::.....x.xx..:x........:...::.::.....x...x...x.x:-----.x..:::.x.x.x.:....:x...x..:.. 86M5D30M 72/116 62.1% 116/94230402 0.0% 5/116 4.3% 70351905 NA +3285 chr4 + 190214555 146728790 146728789 146728911 122 TATACGTATATATACACATATATATGTGTATATATACATATATATACACATATATATGTATATATATACACATATATATGTGTGTGTATATATATATGTGTGTATGTATATATATATGTACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTG------------TATATGTGTATGAATATGCATGCACACG .....:.:.:.:.x:x::.:x:::.:.x.....:...x:.:......x.:.:..:x.:..::...:...x...::x.x....------------...:........x....::..::::... 82M12D28M 68/110 61.8% 110/94230402 0.0% 12/110 10.9% 125619596 64594959 +3133 chr4 + 190214555 146728804 146728803 146728895 92 CACATATATATGTGTATATATACATATATATACACATATATATGTATATATATACACATATATATGTGTGTGTATATATATATGTGTGTATG chr4 + 94230402 22600181 22600180 22600272 22600181 22600180 22600272 92 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ....x.x..x::x.x.x.:.:......x:.:.::..x.:.:...:...:.x.x.:.::.....x.............::..::::..:x:.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 124128623 66085932 +3134 chr4 + 190214555 146728860 146728859 146728920 61 CATATATATGTGTGTGTATATATATATGTGTGTATGTATATATATATGTACGTATCTGTCT chr4 + 94230402 37579519 37579518 37579579 37579519 37579518 37579579 61 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGTTAGTCT ...................:......x:..:::.:.:.....xx.:..:.x:.:.:x.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 109149341 81065214 +12936 chr4 + 190214555 146745986 146745985 146746262 277 AAGAGATACTTTGCTTTCTATATTGCAATTGGGAGGCACAGCTAGTTTACTCTGTCT---AAACTCCCAGTTCAGCGATTGATGTTGAGAA--AGAAGCTCAGTCTCCTAGAGTGAGTGGAGTTTATAGACTAGCCTTCAGCTTGTAGATTCTCTGTACCAGCCCTAGGGGAGGATAGATTTTATGAATAAAATATTTGTGAACAGCAGTAGTCACAGCATTATTACAAACTTAAAAAAAAAGATATCAAAGGGCATGGTTACATGAAGTGAGCAACAAGTC chr4 + 94230402 32726279 32726278 32726552 32726279 32726278 32726552 274 AGAAGATCCCTTGCTACATACACTGAAATTGGGAA-CACAG------TACTTTGTCACCAAAAGTCTCAACCCAAGCACTGATGTTCAAAGCCAGGAGTACCATTTCTTAGAGCAAGCGAAGTTTACAGGCTAGCTTTCAGCTTGCAGATCATCTGCAGCTGCCCTGTGGGAGGATAGCTTTTATAAATAAAATATTTGTGAACAGCGGTAGACACAGTACTATTACCAAGTC-CAAAAAAAGATATCAAAGGGCACTGTTGCATGTGTTGAGCAACAAGCC .::....x.:.....x:x..:.:..x........:-.....------....:....x---...x..:..:::..:xx.:.......x.:.:--..:..:x.x:.:..:.....::..:.:......:..:.....:.........:....:x....:.x.x.....:x..........x......:.....................:....x.....:.:......x..x.:-x.....................:x...:....x:x...........:. 35M1D5M6D10M3I31M2I140M1D48M 205/269 76.2% 274/94230402 0.0% 13/269 4.8% 114019707 76194848 +3035 chr4 + 190214555 146749459 146749458 146749508 50 AATGACCTCCATCAGAGGAAAAGAAAAGAAAAAAGAATAAAAGAGTGAAG chr4 + 94230402 54526062 54526061 54526111 54526062 54526061 54526111 50 AATGTTCTCTTTCAGAGGACAGGAAAATAAAAAAGAATAAAAGTGTTAAG ....x:...:x........x.:.....x...............x..x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 92223397 NA +47928 chr4 + 190214555 146761449 146761448 146762558 1110 CTTACTCTTTAGTAATTGGTAATTTTTCTAGAACAAATATATTCAAGTAAGCTTCCAATGCACACTTTGTACACTGCATGCATAATCAATGTTGAAATCAGAGCTA-----AGTGTGGGTGAATAATATTTTTTGAGTTAGGGGGTCAAAGCTGCCTTGTATTCCACTGGGTTAGATTTGGAGGTTGCAGGAGATTTTAGTTGAGTAGTTTCCCTAAACAGAGTAGTTTTTTTTTTTTTTTTTGT--------AGACTTGTCTCT-TTGCTCCCTTTT-ACTTACTCTTTTT-TAGTATGGTGTAGTATACATAATTTAAATAACCAGGGAATGTCTCTGGGCTCAAAACCACCTGCTGGCTTATATTAGCTAATTAATGATGATTTATCTGAGTTACTAATTTGAGTGGAGCTGAATGCCCTTAGGAATTTGAGAAACGTTGTAAGAATTCTGATTAAAATTATGCCTTTGTGACGGACATTCTTCTTAAAAGGCGTTTATAAAAATGTTGCCTGTTAGCAGATTTAAAAAAACAAAAACAAAAACAAAAACCTGCCAAATAAATGACCTTGTGTTTTTTTTCTGGGCTCAAATCATGTCTTATGGCAGTCTGCTTGCTCTTGTTATTCAATTTTATCTCTGCTAGGCTTCCTTTCATTTCGTCTCTTAT--TAAGGTTTATTTGCCTAGTTTTATAGGGCTTTGACTGCTTGAAAAATAGAACTGATCTTGAATCCACAGAGCTCCATCATTTTCACAAAAACTAATACAGTGGATTCATTTCAGCCAAACTTGTGTGTCAGGCTGGCCTGATTCCCAGGGCCTGAATATGTGAATTTAATGGTGGTACAACGTCTGAGGTTGGAATATAATAGAAAGCTCTCAGCAGTATATCTATTGGATCAGTGTAATTTCTTTTTTTTTTTTTTTTCCTGTGAGTCTCAATGTCTCTTAAGGCAATGTAGTCTGTGTA----AAAGCTGGCTG--GCTATCTCTTACTGAGATCCCACTGCTG-TTACAGTCAACAAAGAATCATCTCCTTGGATAACGTATATAGTAGGCAACAGTTAAATACACAATTAGGGTTCACTGAAACAGTAATTCTATTAACTGGTATGTTCTATTTCTAT chr4 + 94230402 32728361 32728360 32729418 32728361 32728360 32729418 1058 CCCATTCTCTAGTCATG---AACATCTTTAGAACAAATCT-TTTAAGCAAGCTTCCAATGCTGATTTTGTTCCCCGCATATA-ATTCACTGTTGAAATGGCAGCTATGTAGAATATTCCTGGATTGTATTATTCCAGCT-GGGGGTCGAAGCCGCCTTGTATTCCTTTGGGTAGGATACGGGAGTTGGAGAAGACTTTAGCTGAGCATCAACCCCAAACA------TTTCttttttttttttttttaataaaCAGACTTGTGTCTGTTGTTCCCCTTTCACTTACTCTATCTATGGTGTAGTGTAGTATACATAATTTAAATAACCAGGGAATCTCTCTGGGCTCAAAACCACCTGCTGGCTTATATTAGCTAATTAATGGTGATTTATCCAACTTACTAATTCGAGTGGAGCTGATTGCCTTCAGGAATTTTGTGAACGTTGTAAGAATTCTGATTATAATTATGCTTATTTGATGGGCAGTCTACTTAAAATACTTTAAC--------TGACTTTTAAC-------------------------------TATGCCAAATAAACATTTTGGTGTTGTTT--CTTACTTGAAGGCATGTATTTAGGTAGTTTGTTTACT-TTGCCATTCAATTTCATCTTTGTCTTCCTCCTTGTCATATTCTCTTTTATATTAAGGGTTATTAGCCTAGCTTTGAAA--CAATGACTGTTTGAAAAATAGTACTGATCTTGAACGTGCAGAACTTAATCATTTTCACAAAAACTAATATAGCAGATTCATTTTAGCCAAACTTCTCTGTCATGCTGCCCTGATTCCCAGGGCCTGAAAGTGTGAATTTAATGGTGGAATGATGTCTCAAGTAAGAATATAATAGAAACCTCTCAGCAGTATATCTATTGGATCAGTGCAATTTCTTTTTCT----------CTACTGGTCTCAATGTCTCTTAAGGCAATCTACTCTGCAGACAGTAAAGGAGGCTACTCTTCTCTTTTACTGTGATCCCAGTGCTACTTATACTAAACAAAGAATCAAGTCCCTTGATAAGGTATACAGTAGATATTTGTTAAACATATAATCCTAG-----------AGGAAAGTTATTAACAAATTTATTCTTTTGCAAT .::.:...:....x..x---..:x.:.:..........x.-..:...:.............xx.:.....x.x.:....::.-.x...x.........x:x.....-----.:.:.xxx..:..x:....x..:x..:.-.......:....:............x:.....x:...x:..::....x..:...:.....:....:.x:xx...:.....------...:.............x.--------........x...-...:....:...-.........x.:.-.:..:.:.................................x..............................................:.........::.x.........:............x....:.:........x:x:......................x........:.x.x...:..:..x...x.......x:.x..x.:--------..x..x...:.-------------------------------:x...........::x::.x.....x...--..x:x:.x..:x.....x..xx..:...:..:..:..-...::.........:....:..::xxx..:.:.x....x.:x...:....--.....x.....x......:...:x.:--.xx......:...........x............:x::....:..:x......................:..::.........:..........x.x.....x....x....................x:.................x.::.:....x.:..x:..............x.............................:...........:.----------..::x:.......................x..x....::x.----....xx....:--x:.x...:......x.......x....:-...:.x.x............xx...:.x.....x.....:.....::.x:x......:.:.:...:xx:.-----------..x..xx:.......x::.x.:....x..x.x.. 17M3D20M1D41M1D23M5I28M1D80M6D19M8I12M1I12M1I13M1I209M8D11M31D29M2D37M1D50M2I26M2D222M10D41M4I11M2I28M1I70M11D34M 807/1033 78.1% 1058/94230402 0.0% 102/1033 9.9% 114033088 76181467 +19235 chr4 + 190214555 146764217 146764216 146765094 878 GAGAAAATAGATTCCAATTCATAGCTACTGTATTGTGCAAGATTCTTATTAAAAACAGCATATTCCTGTAGCCCAGAGGGCTGACAGCTTTTTCCAAAGCAAAACCGCTGCTCTAAGCTAACCTCAAGGGGCTACTCGAGAGAGATGCAGCCTTAA-CCCCTCTCATTGTGGCGGTGGGGAGGAGGAGAGAGGAGGGCAGATAGTATCATATCCTACCACAACTCCAAACCTTTATCACCTCAATAAGTAATGTTTCTTAAGGCATTACTGACATTCAGTTCCCTGGTTAA------TTGGTTTATAAGTACTTCAATAAAAATAATTATTTTAAAAAGA---AAAAAAACCTTAAAATAGAATCAGTTTAGGAGCGTACCCATACATAGGCTCAGT-TATGTAAGAATTTT------TCCTATTTTAAAAAAATCATGTTCGAACATAGGTATCATTTGCTTCTATTTCATCGCTTGTACTTGACGTTTTACCTGCAGATGATCAAACTATAATAAAGGGAT--CACTGCCAGACTTAGGCTTTAACAATGTTGAGTAAAGCAATGCTTGGAGACGTGGTGCTGAGGAACAGAAATGTACTGAATAAATTCAGTTCAAACAGGATGATCATGTCCTGAGGTACCACTAACGTTGGTGTTTTTTCTTATTGCCTACTGATAGTGACAGCAA---CTGCGAAGAGAGTTTGTCTCTTTCTTTTTCTTTTCCATGATGA----TCATCAGTTTGCTGATTTCATGATCTCACGTTTCATGTACAGCCTTGTTAACTTTAAGTTTAGCCATAAGCATTATTGGTGT-ATTTTTCTATGCATTACCAAAAAAGTCTTC-------ATTAATG------TTATGTCAGACCTCAATGTATTAACTT--ACCATTTTATAGATTTT chr4 + 94230402 32732424 32732423 32733233 32732424 32732423 32733233 810 GAGAGAAAGCACACAAACTCATAGCTACTGTCTTGTGCAATGTACTTATTAAAAACAGCACATTCCTGTAGCCCAGAGGGCTGACAGCTTCCTCCAAAGTCGTACTGCTGCTCCAAGCTAACCTCCAGGGGCTACTCGAGAGCAATGCAATCTTCATCCTCTCCTACTG-------------------------AGTCTGAACATATCACATCC-ACTACAGGCTC-AACCTCAGCTATCCTGAGAAATGTTATACCTAAGGTGGCTTTTGAACTCCACTTCTGGGGGAGAGGCACTCTGGC---TAAGCAATGAATTAAAAACTACCACTCTCAAAACATTTCAAACAATTTTAAGATAAA-------TAAGA----------ACATGGATTCAGTACAGCTGAGGGCTTTTTTTCCTCCTGTT-------ACCTGTGTCTGAA---------CATTTGTTCCCATTACATCGCTCATTCGTGACTTTTTAATCTCACATGATGAAAATATAACAAAGAAATAGAACTGCCAAACCCTGAGCCTCACGACATGG--------AATGCTTGCAG--GCGGCACTGAAGAACAAAAAAGCACTGAACAAATTCAGTTCAAAAGGACCGATCATGTCCTGAGGTACAGCTAGC-----------TTGTTGTTGTCTGTTAGAAGTGGCATAAAAATCTTGGGAGAA---------------TTTTTCCTCCAAAGACAGTATCTCTCCAGTTTGCTAGATACACTGTTTTACTGTGCAGGAACACCTTCTTTGACTTTAAGTTCAGCCTTGGGC-----TGGTGTCACTTATCTTTGT-TTAC--AAAAAGCCCTCGTATTTGATTGTTGCATTTATTAAGTCAAACTCCGA---ACCAACTTTCATCTTTCTATAGCCCTT ....:..x:x.:x.x..:.............x........x:.x................:.............................::.......:x:x..:.......:...........x................x:.....::...x.-..:...::.:..-------------------------:.x.x..xx:.....:....-..:...:x::.-.....:x:::.:.:::.x..:.:x.:.x:..x.:.xx::.x:...xx.:..x...:xx..xx:.------:...:---....:.x.xx.x......:x.::.:.:.x....x.---x...x..::....:...:.-------..:..----------....:.::.....-:.xx.:..:::...------....:..-------.x:::...::...---------......:.:.:...x.......::.x.x....x.....x::x..x.....x...x.....:....::..--x.......:..::x.:x::.x..:.::.x.--------........x..--.:..::....:.....:...x.:......:..............x:.:x:..................x:...:.-----------..x..:...:..::.::x....:..xx..---..xx.:...:---------------....:::.:.x.x..:::----..x:.........::x.x..:x:.:.:..xx.x..x.x...x.:.:x..:..........:....x.::..-----......-.:..x...x..:-....--......:.:..-------...:x..------...x....:..::.:.---.::.....--.:.x..:.....x::.. 156M1I12M25D20M1D11M1D64M6I5M3D35M3I19M7D5M10D13M1I14M6I7M7D13M9D69M2I30M8D11M2D75M11D29M3I10M15D18M4I71M5D6M1I12M1D4M2D11M7I7M6I16M3D8M2I17M 532/768 69.3% 810/94230402 0.0% 152/768 19.8% 114031793 76182762 +3628 chr4 + 190214555 146768047 146768046 146768166 120 TTTATATCAATAGTTGTGCAGGGAATTTATTTGTCAGGAAGTAAAATAGCATTTCAAAATGTGTTATGATATGTAATTTTTTTAGAGGAAAGAAGAGAAAGTAAAGAAAATTGAGTATTA chr4 + 94230402 74830356 74830355 74830463 74830356 74830355 74830463 108 TTTATTTCAGTAGTGTTGCATG------------CATTAAAAAAAATTGCATTTTAAAATGAATTCAATTTCTTAATTCTCTTAGAAAAAAAAAGGAAAAAAAAGGAAAATTAAATCTCA .....x...:....xx....x.------------..xx..:x.....x......:......x:..xx:x.x:x.....:.:.....::...:...::...:x..:.......:.:.x.:. 22M12D86M 74/108 68.5% 108/94230402 0.0% 12/108 11.1% 71937691 NA +48346 chr4 + 190214555 146768328 146768327 146769153 826 TAAATTAACTCCAACCATCAGTAGGTAACA-AATGTGGAAATAAGAT-CATCAACATACTCATGGATTACATTTT--------GAAAAG-------TCAGAAGCAAAACAGTATTAAGCTGTGTAGTCAAAACCGAAGTTGCTCAAGTTAAATATAATTCTCTCTTTATTACTATAAACTGTCTGAGAAAATCTGGCTCAAATTTATAAGACAGTCTAAAAGCAAAATTAAAGAAAAAGATGACAATTTTGAAGAGATTTTTTCCCCTCCATTAACACAACTAGGCTGGCTGAGCTGTGAAACTGTGATGGAAATATTAGAGCTGTTGTGCCTGAAAAAAAATGCAGTGATCATTTCATTCTTCCTGTCTTTTAATGCTCCAGGGTTTTGGAGACGAATAGGAGCAATAAGTTCACTTTGCAGAATTAATGCAGTAATTCTTTATCATAAGAGCAGAGCATTACCTCAATCTGATTTTGCTACAAAATGGTTCAAAGTCTATTTTTAATGATGGCCCTAATTTGTTAACACCTTTTAAATTATTAATCCCCTTTATATTCAAGTAGTTATTGCATGTCATAACAATGTATCTATGCAGGGAAATTTAATAGTATTTTCTAGATGTCAAGAAAAGGCTTGTTCTGCAAAATGCTATTAAAACTGATAATGAGCTAAATATTTGCCATAGCAAACACTGAAATTACTATATCAATCAGCATTGGGCTCTCTTATTCAATAAACAGAAATTAACCTATTAACTATGCCTAACTTTCAGCGACAAAATGGTTGCTTTCAAGCATTTCTCCCC----ACTTCAAATCTTTCTTTCCTTAAAAACTACATATT chr4 + 94230402 32738398 32738397 32739224 32738398 32738397 32739224 827 TGAAATGCCTCTGGTCATCAGTTGTTGGAAGAAAGAAAAAAGAAAATGCAAAAAGAAAACCAGGGGTTACATTTTACAATCAAGAAAAGACCAGCTTCTGCATAGAAGAAATGTTT-GTTTTATACTCTGCATAGATGCTGTTCAAGCAAAAT-----TCTCAGTATATTAATACAAACTGTCTGAAAATATTCAACATGATTTTAGGAGACCAGC-AAAAACAAAAC-AAAGGGAAGCGTGACGTTTGTG----GGCTTTTTCCTCC-----AGCACAGCCATGCAAGCTGAGCTGGGAAACCGTGATGGAAATATTAGAGCTGTTGTGCCTGAAAAAA--CGCAGTGATCATTTCATTCTTTCTGTCTTTTAATGCTCCAGGGTTTTGGAGACGAATAGGAGCAATAAGTTCACTTTGCAGAATTAATGCTGTAATTCTTTATCATAAGAGCAGAGCATTACCTCAATCTGATTTTTCTACAAAATGGTTCAAAGTCTATTTTTAATGATGGCCCTAATTTGTTAACACCTTTTAAATTATTAATCCCCTTTATATTCAAGTAGTTATTGCATGTCATAACAATGTATCTATGCAGGGAAATTTAATAGTATTTTCTGCATGTCAAGAAAAGGCTTGTTCTGCAAAATGCTATTAAAACTGATAATGAGCTAAATATTTGCCATAGCAAACAGTGAAATTACTATATCAATCAACTTTGGGTTCTCTTATTCAATAAACAAAATTTAACCTATTAACTTTGCCTAATTTTAGGCAGCAAAATGCTTGTTTTCAGGCATATCTTGCCTTTGACTTCATATCTTTATCATC-TGATAACTACATTTT .:..x.:x...::::.......x.x.::x.-..x.x::...x..:..-..xx..x.x.x:..x..:.........--------......-------..x.x.xx:..:x.:.:..x-.:.x.:..x..x:x.:x..x.:..:.....:x....-----....xx.x.....x..:...........:..x..::::.x::.x....x:....x:x.-....:.....:-....::..:x:....:x..x..----.::.......:.:-----.:....:.:.x..x:.........x.....:....................................--:....................:....................................................................x.............................................x............................................................................................................................................:x.........................................................................x....................:.x.....:..................:..x..............x.......:...x:..::.......x...:.....:....x...:x..----......x......x.:x:.-.:.x........x.. 30M1I16M1I27M8I6M7I20M1D36M5D58M1D11M1D22M4D13M5D67M2D466M4I19M1D15M 681/806 84.5% 827/94230402 0.0% 41/806 5.1% 114029930 76184625 +3062 chr4 + 190214555 146778962 146778961 146779015 54 TACTCCTAAATAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGA chr4 + 94230402 15990210 15990209 15990263 15990210 15990209 15990263 54 TGCTCCTACATGTGCAAATAAATTAGAAAAAAAAAAAAAAAAGGAAGAAGAAGA .:......x..:x.....x...xx.:.................:..::.:.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 130788752 59425803 +49161 chr4 + 190214555 146787384 146787383 146788234 851 GTATGCGTGTGTGTTTGCATCTGTGTGTGTGTGGA-------AATGGTAGTAGTT---------GTAGCAAAA---------------GCAAAATACTTGAGTTGTTCCCTCCAAAGTGGGAAAAT----TGATTTACATAGTTGTTTGCTATT------AAGACTCAAATAAGTCTAGCGTGCTTAGGTTTTCTCCTGTGTTTGCCAGTTTTTGACAGCTGCCAGTTAACAGATGTGATCACTTTATCTAAGCATCGCTAGC------CTAGTATCTTCAGAAA---ATCTT--CTGTGAAAGCTGCAGCTTCACCGTCCCAAGTCAATTCCTGCAATCTTAAACTTGCAGCGTATTCATTTGTGGGCACTGAGGCAGCCAGTGGGAGGGTATTGATTGGAGTATAATGTCATGTGTAGCAG-GAGAGAAAGATGAAAAGTGTTTTCTGCTTAATGGGTTGGTATTAAGTAGGTGGGAATGGCTTCTAATTAGCCAACAATTGCTGTGTTTCCCAGTTTCCCTCCTTCCCCTCCTCCTGTCGGTCACCAGCTGCCAATCTGCCCCCTTTTTT----TTTTATTTGGAGTTCATTGCTCACTGCAGTGAAAGCCTTTGTTTAAGAAAGAGGGCTCCCAGGGTCTCAGCTGCCTGGGTACAGCATGCTGCCTACGATGAGTAGCAACTGTCAGTTTATTTTATCTCAACCTTTTCATCATGCTGCTGAAACTGATCGACTGAAACCACCTGAGAGACCTGAGGATTCAGTACCTACAAGTCATTAGCTAGGACTGCACAGCCTTTCACCACATAGCAAGTCAACTGAACACTTCCTGGAATGCAGTCCAGTTTAACCCCATGCTTTCCCAGGAACACATAAGAATTCTGT-CCCTTTTTTGTTTTTGAAG chr4 + 94230402 32745005 32745004 32745903 32745005 32745004 32745903 899 GTGTGCATGTGTGTATGTATGTATAT-TCTGTAGATGCAACCAAGGATAAGAGTTCAAAAATTCGTGGAAAAATCTAGATGCCTGGGTGCAAACCACCTAGATTTCTTACTTAAACGGGGGGAAATAATCTGAGAACAACACTTATTCTCTCTTCAGTCAAAGGCTAAAAGGGATTCATCGCT----GACTTCGTCC---ACTTGCCAATTGTTGACAGCTGTCAATACAGGGATTTGATTTCTTTATCCAAGCATCACAAACACTACATTAGGATCTTCAGAGAGAGATCGTGACTGTGAGAGCTGCAGTTTCACTGCCCCAACTCAATTACTGCATTCTTGAACT-GCAATGTATTCATTTGCGGGCACTGGGGCAGCCAGTGGGAGGGTATTGATTGGAGTATAATGTCATGTGTAGCAGCGAGAGTAAGATGAAAAGTGTTTTCTGCTTAATGG-CTGGTATTAAGTAGGTGGGAACGGCTTCTAATTAGCCAACAATTGCCGTGTTTCCCAGTTTCCCTCCTTTCCCTCCTCCTGTCGGTCACCAGCTGCCAATCTCCCTCTCCTTTTCCCTTTTTGTGTGGAGTTCATTGCACACTGCAGTGAAAGCCTTTGTTTAAAAAAGAGGGCTCCCAGGGTCTCATCTGCCAGGGTACAGCTTGCTGCCTGCGATGAGTAGCAACTGTCAGTTTATTTTATCTCAACCTTTTCATCATTCTGCTGAAACTGGTCGAGTGAAACCACCTGAGAGACCTGAGGATTCAGTACCTACAAGTCATTAGCCAGGACTGCTCAGTCTCTCCCCACACAGCAAGTCAACTGAACACTGCTTAAAATGTAGTCCACTTTAACCCCGTATTTTCCTACGGATGCATTAGAACTCTGTGCAGCTTCCTGATTTTGAAG ..:...:.......x..:..x.:.:.-.x...:..-------..x.:..:x....---------..:.x....---------------.....x:..:.:::..x:.:x..:x..x.x...:....----...xxxxx.:.x..:..:x..x..------...:..x...x:::.::.x..:x----.::..:x...---::......:..x..........:..:.xx.x:...x....:x.......:.......:.x.:.------:...x.........:.---...x.--......:........:.....:.:.....x......x.....x....:....-...::...........:........:.................................................-.....x............................-:....................:........................:......................:................................x..:.:::....----....:.x.............x.........................:......................x.....x.........x........:...............................................x............:....x................................................:........x...:..:..x.....:...................x.:.::....:......x.........:.::.....:.x.:.::...x....:.....-.xx:..::..x........ 26M1D8M7I13M9I9M15I38M4I24M6I23M4D10M3D63M6I16M3I5M2I52M1D75M1I34M1D114M4I312M1I19M 703/841 83.6% 899/94230402 0.0% 68/841 8.1% 114042379 76172176 +5037 chr4 + 190214555 146793926 146793925 146794088 163 CAGAAACAACTGGAAGGGCCTCAGG----GCATGGTCATCT-ATTTAAGCATCCACTTGGATTTTCAACATAATTAGTCATATAATTGTGTGCCCAAACT------TAGTAGATTCA--TGTAAGTAATGATAAATTATTAAAAAG--CTGTGCTTGTAATGTTTTGCTTCTTATTTC chr4 + 94230402 46668248 46668247 46668424 46668248 46668247 46668424 177 CAGAAACAACTGGGCAG-CCTCAGAAGAAGCATGGCCATTTTAGATAAGTGTGCAATTGCATTTTCAACATAATTAGGTGCCTAATTGTGCGCCCAGGCCTTGCTGTAGTATTTGCACGTGTATCTAATTATGATTTATCTAAAAGCTCTCTGGCCATAATGCCTTGCTCTCCAATCC .............:x:.-......:----......:...:.-.xx....::.x..x...x.................x:::x........:.....::.:------.....xx.x..--....xx....x..:.x....:x.....--..x..x:::.....::.....::::.x.:. 17M1D7M4I12M1I58M6I11M2I27M2I30M 117/162 72.2% 177/94230402 0.0% 16/162 9.9% 100125678 90088877 +3007 chr4 + 190214555 146801972 146801971 146802037 66 CTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGACTTTTTTAAAGCGAAAATCAGGAT chr4 + 94230402 75080582 75080581 75080647 75080582 75080581 75080647 66 CTATCACTAAAATAAAAAGAACAAAGAAAAAAAAAAGATAGGCACTTTGACAAAAAAAATCAGTAT ..:..x.x....x.....:..x...:..........:.x..:.x:...x.x.:x:........x.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 71721390 NA +12119 chr4 + 190214555 146803257 146803256 146803703 447 CTATTTTATGCTTCTCTTAAACATCAAAGGTATAATTTAGCACAAAAGTATATCCAACCTTCATGTAGTA-ATGGATCCATAAAATTGAAATTACCAATCAAATTAAA-ATCACCGACATTTGAGTGAAACTTTCCAATGAAAGTAAATTAATCATTGAGAATGATATGAAAACTAAAGTGTTCTAAAAACCAATGCCTTACCA---GTAACTGGATCAGGTTCAATGTTACCTCTGCTCTCCTTCCATGACAGCAGGTAGTTGAGGCTGGTGAGATCTGCAGACTCTATATAGTTGTTCACTGTAAGCATCATCTGATGAGCTTTTGCTATTCCATAGTGAACTTTTGTCTCATCCATCAGAGGCATGCTCATTAGCTCTACTGTTGTGTCAAAAGCTTGCTGAAAGCATTCAGAAGCTTTGTTGTAGTATCCCTAAAAAGGTAAGAGAAA chr4 + 94230402 32755047 32755046 32755472 32755047 32755046 32755472 426 CTATTTAATTCTGTCTTTAAA----------ATAAGCACACAAAGGAGAAAATCTAACCTTCATTCAGCACAAGGAT------------AAT--CCAATAGAGTTAAACACAAGAAATAATTTAATAAAACTCTCCAAGAAAAATGACTTAACCATTGAGGACAATAC-AGCACTAATGTGCT-TCGTAACCAATGTCTTACCGACTGTGAGAGGGTCAGTGCACACGTCACTTCTGTTCTCCTTCCATGCCAGCAAATACTTGAGGCTGATGGGATCTTCTGCTGCTATATGGCTGTTGAACACCACCATCAGTTTATGAGCCCTTGCAATGCCACAATAAGTCCTTGTTTCATTAGCTAAGGACAAATTATTTGAAGTGTTTGCTGCCTCAAAAGCCTGAGTGAAATATTCAAGAGCTTTGTCATAATTCCCCTAGCAAAGAAAAAAAAA ......x..x..x:::.....----------....x:xx:..x.::..x.x...:.........x:..:.-.x....------------...--.....x:.:.....-.:x.xx:.:.x..x.:.:.....:.....x:...:.:.x....:.......:.::...:-.:x.....x...:.-.x:x........:......:---..:.xx..:....xx:xx.:..:..:....:............x.....::..x.........:..:.....x.x.x:x......:.:....x.x:::x.x.....x:.x......::....x..x...:.:.:.::::....:....:x:::.::.:..x::.xx..::xx:xx:..:..:x........:..xxx:..::.....::........::..:.x:.....:x..:.x..:.:... 21M10D39M1I6M12D3M2D14M1I59M1D14M1D20M3I245M 275/421 65.3% 426/94230402 0.0% 31/421 7.4% 114048210 76166345 +3339 chr4 + 190214555 146813854 146813853 146813926 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACGTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x...x.......:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 70780649 NA +3129 chr4 + 190214555 146814725 146814724 146814764 40 AAAAAAAAAAAAAAAAAAAAAAAAAAGGGGAGGGGGGCGA chr4 + 94230402 85790960 85790959 85790999 85790960 85790959 85790999 40 AAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAA ...:..:..........:......:.............:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 61023765 NA +5159 chr4 + 190214555 146820119 146820118 146820298 180 ACTCACTTTTTCATTGTAGATGTCCCCAAGCATTGTACTTGCTCTCACCAAATCTAGGCTTTGAAAATTGTTTCTTGCAATTTTCACAAATTTTTTCAAGTATTTAATTGCTTCTGTCATCTCTCCTTGGCTAGAATGAATGAAATAGGAAGTCAATGGAGTATCATCTCACTTAATGTC chr4 + 94230402 32758170 32758169 32758348 32758170 32758169 32758348 179 ACTTACTCTTGCATTGTAAATGTTCCCGATCAACACACATGCATCCACCACGCTTTGGCTTAGATTAGCATTCTCAGCAACCTTCTTAAACTCTTCCAAGTATGTAAGACTTTCAGCCACTTTTCCCTGACTGAAGCAAAGGACAAGGGAAAG-AATTAAATATCCACCCAGATGGTGCC ...:...:..x.......:....:...:.x..x:::..x...x::.....x:::.x.....x..xx.x::..:::x....::...x:...:.:..:.......x...xxx:...x.:..::.:...:..:..::.:::..x..x.x:....:x-...x:.:....xx.:..xx.::..:. 153M1D26M 108/179 60.3% 179/94230402 0.0% 1/179 0.6% 114061949 76152606 +55370 chr4 + 190214555 146828877 146828876 146829718 842 TATTAACATTATATGCTG---GTTAAAGGTTTTCCAAATTTAAAAGTTAGTGACAGATTTAGAAGCCATTCTTTTTATGGAAGGGGAAAACACCAAATATTTTCTTACAGAAAGGGTACAGCTTATTTGTATAAGTTAAAGGACAAGGTTAAAATGTTAGATAAATATTAATTCCAGTTTT---------CTATATGCAGTGCACAGGTGCAACTTGAACAGCATATTATATGGTATAATCATTAAATTCATTCAACCAGACCTTAGAGAGTTAAAAACATATATTCGGAGGAACAGGACTCCTCGGTCCAAAGAATGAGAATGAAACAGTGCAGAATATTTGTGTATCAAGGTGATTCCAGTTTCCAACTGGGAAAACAGGACCGTTAACACCCACGTCCCTTGACAACTGTCCAATTATGTATATCACACTTGGCCTACTGTTTGCAGTAGAAGTAATCAATAAAGGATGTGGTTGAGTGAACATAGATTTTGGTTGAACCAATGCATGAAAACTTAATCATTTACTCAGAGAGAAGAAATCAAATAGAGCAGAGATGAAACAGCCACTAAGGGGTTTGTTGATTGTGCCACCAAGTTTGTGGGCCACAGA-TGAAAGTAATAAGGCAAATGGGATCAGTGACAGGAGAAAATGCAAAAAGCTGTTCTTAATTTCATGAATTAATAGATATGTTTTGATGTATTTTTTGGTCATTTTTAGGAAACTTCACATCAAAGCCTGGATGTTCCATTTTAAAGAATATATGAAAATTACTAGGGCGTGTCATTTCTCTCAAGCAAGAAAAAATTAATTTTCAGCTATAACAGAAAGGTAATTTTCACACTTGAAACTT chr4 + 94230402 32759749 32759748 32760596 32759749 32759748 32760596 848 TACTAAAAACATATGCCAAATGTCAAAAGATTACTAAATTTTAGACTTAGAAACCTCTTTTTTAACCTATGTTTTTTCCAAAGAAGAGAAAATCAAGTGTATCTCAACAGAAATCCAGCATATGATTTATATAAGTTAAAGGACAAGGTTAAAGTGTTAGACAAATATTAATTCCAGTTTTTCTAGTTTTCTATATGCAGTGCACAGGTGCAACTTGAAGAGCATATTATATGATACAATCATTAAATCCATTCAACCAGACCTTTGAGAGTTAAAAACATATATTCTGAGGAAAAGGACTCCTCGGTCCAAGGAATGAGAATGAAACAGTGCAGAATATTTGTGTATCAAGGTGATTCCAGTTTCCAATTGGGAAAACAGGACTGTTAACACCCACATCCCCTGACAACTGTCCAATTATGTATATCACACTTGGCCTACTGTTTGCAGTAGAAGTAATCAATAAAGGATGTGGTTGAGTGAACATAGATTTTGGTTGAACCAATGCATGAAAACTTAATCATTTACTCAGAGTGGAGAAATCAAATAGAGCAGGGATGAAACAGCCACTGAGGGGTTTGTTGATTGTGCCACCAAGTTTGTGGGCTAGAGGCTGAAAGTAATAAAGCAAATGGAATCAGTGACAGGAGAAAATGTAAAAAGGTTTTCCTAATTTCATGAATTAATAGAAATGTTTTGATGTA-TTTTTGGTCATTTTT--TATATTTCACATAAAAACCT--ATGCTCCG-TGTATAGAAAATATAAAAATTGATAGGGCATATAATATCTTGCAAGCAAGCAGAAATCAATTTGACAC-ATACCAGAAAGATGGTTCTCAGTGTTAGAACTT ..:...x.x:......::---..:...:.x..x.:......x.:.x....x:..xxx...xxx.:..xx.x.....x:x:...::..:..x.:...:.:.x.:::x.......xxxx:..xx.x....:........................:.......:...................---------.............................x.............:..:...........:................x.....................x......x.................:........................................................:..............:............:....:...................................................................................................................................x.:..................:...............:...................................:.x..:-............:........:....................:......x.x...:....................x.............-...............--x.x.:.......x...:...--...:...:-.x..x....x....:......:x......:.:.x..x...:x........x.:....:.....xxx:.-...x.......:.::..:...xxx..::..... 18M3I160M9I423M1I90M1D15M2D20M2D8M1D68M1D33M 720/835 86.2% 848/94230402 0.0% 20/835 2.4% 114069128 76145427 +25172 chr4 + 190214555 146833493 146833492 146834815 1323 TTTCTGTGCTGTCTGCTTTCTTAACTTGTGAGATGTGACCCGATTTTTTTCTCTTTTATTCAAGGTCATCACTAAACTTACAGAAAACCAAAAAGAAAATAATAC---------------------GAAGGAG-----------GCACAGACAAAGAAGAGTTTAGATGCATATTTTAAACTACCAAACTG-----GTTTAAAATAACTTATGATGAAAGGGTCACTTA-----AGAAGGGCACTGCTTAAAATTTAAGCAGGCAGTAATGGAAAGCGACAGACCTCAAACAATTTAAGCCTTTCACAGTTGAGTGAATTCACAGTGACAGCAAGATGAGAATGTGCTAACTTACCTCTGCAGGACCTTGGCTATGGCTTCATAGCCTCTCCCCAGACTGAGATCATCATCCAGGTCTGTGGAGATTTTACAGTAAGTGTCAAGGACCTATCAGGAAGAGAAATACATATTGAACATATAGCACAGCCAG--------------ATACGCTGATGT------------TTCATTTCATAACAGAAAAAAATAAAATT----AATAGTTG-------GTTTTAAT--GTCTCTATAAAAA-ATTTTGTTGATTAAAAATTCATGTTGGTTTGGTTTATTTTTATCTATAGTATAACTTGTTTTGTGGCAATCT------CTTTAAGCCATGACAGTGACGCCTTACTTTTGGAA-----------------------------------AAAATAATTCTTTTCTTGCATAATTGCCCAAATCTTCCAA---------TTTATATAACTTAGGTGTGAATAAATAATTTAA-----------------------TGGTTTTTACATTATTTTAAAATACGGGATTATTATCTAACGTAATATAAGGCAGATTATAATATTCTACTATGATAGCTTAAATATCACTTTTC---TTTCTAAAAAT--AGCTATTTGAAAAGCATGAATTTAGGTGCCAGGCAATTTCTAAATCTA-------TCATTTTATTAGATGCATAGCTCACCGTTTGTGCAT----GTATACAGTTTACACTAAAAATATTTCTTACAAATGTATTTCATTACCAACAATCTCTTCAATAATCAAAAGATTACAGCTGCCACAGCCAAACATGTGATCTTAATTTAATTTAACACTGACATCATCTGTATGGTATAA--------------------------------TTTTCCCTTTTCCCTCTTTCAATGGC-CCGAAGGAGAAAAATACATAAAACAGAATCCCCATTCTTCCTTTTTCCTTCATTATTACTTGACCCAACCTATTACACACATGAGGACACAGGAAATCTCCAAAGACC-TCTATGGAAATCCTTTTTGCACATTTTCTAAGAAAGAATTAGCAAAAGTCATTTGACGGCATTTGGAAGACAGAGTCAGTGTGAGGGACGACATAAAAACACCTTGTCTGCTAC----TGCCTGAATCAGGCAGCCTAGAAGGT-------------TTAAGTCTGAGCGGCAGGGT chr4 + 94230402 32763239 32763238 32764711 32763239 32763238 32764711 1473 TTTCTGT--------CTTCTTTAGCCTGAAAAATACACCTGGATTTCAGT---TCTTCAGCAAGACCTTTCCCAAACTTGTGAAAAAAAAGAAAAAGAAAAAAACCCTCAAATTATGGGAAAAAAAAAAAGAGCATAAATCAGTTTATAGGTACAGAAAAGCTTTGGATCATACATTAAAA---AAAATTGTAAGAGTCTAAAATAACTTTCAATGAAAGGGTCACTTACTGCAAGAAGGGCGCTGCTTAAAATTTAAGCAGTCGGTAATGGGAAGCGACAGACCTCTAACAATTTAAGTCTTTCATAGTTGAATGAATCTGCACTGACAGCCAGACAAGGATGTGCTAACCTACCTTACCAGGATCTTGTCTGTAGCTTCATATGCTCTTTTTAGGCCTGCAGAATCATGCAGCGCTGTGAAGATTTTTATAGAGGTGTTCAAAATCTGTGAAACAGAAAAATAAA-ACCCAATAAATACAACGTTAAGCATTTCTCCTTTTTGTGTGTGTGTGTGCAATCCTTGTGTTCAT---ATAAAATGCAAAATTAAAGTTTTCCCATATATGCATTTCTTTTTTAATTAGTTGCAATAGAAACAAGTTTTTGATC-ATCACTCACAGTTGTCTGA---------AACTACATAATAATT---------ACAAACTAAAAAGATCAAAATCATAATTA-AATGTCTCAGTTTTGGAGCGTTGCAATAAATGAAGAGATGTTACCAGATTCACAATATAAATTTCCTTATTCATAATT--TAAGATATTTTAAGAAACTGTGCTTTCATGAATTC-CTATGAATCAATACATTAAGATGATGCCCTCTGTATCCATAGTGTTTTAGAAAATACATTCAAATACAATTTATTTATTTTTCTTTCTTTAAAGTA------------TCACTACGAGAACTTTTTTAGTACAGTTCAGGTGCATAAGAATTGAATAAATTACAGCTTACATGTTTAAA---CAAGGATTGACTGAAAATACTGTAGGTAATTTTCTTATATTTATGACTAATCATTCATGCACACTAGCATCCTGTTAATA--------------TGGGGATATACTCTTTTATC-GTGACCTCTCTCATAACCAAAGGCTTACAGCCACTGCACAAAAACATATGATCTTAATTTAATTTAACACTGACATCACCTGTATTGCATAATTTCTCTTTTCAACCtttttttttttttttctttttctttttttttttttCCAATGGTGGTGAAGGGAGAATGCATATGAAATTAAATCCTGTTCTTTCCTCCTTTTTTCTTTGTTGCTTGACCCAACCTATTACACACATGAGAACACAGGAAATCTCCAAAGACTATCTATGGAAATCCTTTTTGCACG-TTTCCAAGAAAGGAGTAGTGAATGTCATTTACCAGCTTTGAAGGGGGATGGGAGATGCACGGGGACATGTGACAGTAGCCTGCGTGCCCCAAGATGCCTATTTACGGTAAAGTAAAAGATAGGGCACTTCCTATTAAGACTGAATGCCTGGGT .......--------...::...:.:..x:.:..:::x.:x.....:xx.---.:..xxx....::.x.:x.:......::::....xx.:...:.:..x..x..---------------------:..:...-----------x:.:..::.x....:..:..x.:xx....:x.....x---x...:..-----..:...........x::................-----........:...................x.:.......:..............x...........:......:......:.....:::..x.......x...::..:..........:.....:xx.....:....x..:.:........xx....::::..:.:x:x.xx.....x...xx.....:.......xxx:x.:....:x.::.:..:.x.::x...:.....x.-.::x..:.x...xx..:x:x..--------------:.::.:xx:...------------.....---....x.x:x....x....:..----x...xx..-------x.......--..:x.x...:...-.xx..x.....:-.xx.:...::x.x..:..:---------.x...:.xx....:.---------:...x..------x.:x..::...:.:x:-:.:.:..:.x.......:-----------------------------------..x....x.:.::.:x.x.......--:x.:..x..::..---------:..x:..:.x..x-x.:.....x....xx....-----------------------..x...xx.x.x..:x..x......::xx.xx....:.xx.x.xx.x...:.:.------------::....:..x.:...xxx..x:..xx...---.x:x...:...--.::x.x..:x.:xx:.::x:....::---..:.x.x.xx..:..xx..-------.x.....x...x..x:..::..x.:.:..::....:----.:..x.x...x.:.--------------.:x::..:..:.::x...:.-:::.:....::x....:....:.x.......::.::..xxx......:..............................:......x.:....--------------------------------.....::....:::.:..:......:-x:.....:::..x::.:..:...:x:.....:xx.::.....::..::...x..:..:...........................:.....................:-......................:-....:.......:.x...::..x.......:x.:..x..x::::.:x.x:.xx::..::x...:xx.::.:.x.::.x.:..:x...:x.----.....:xx.xx..:.:xx..:...:.-------------.....x....::.x.x.... 7M8D35M3D52M21I7M11I37M3D7M5I33M5I233M1D22M14I12M12I5M3D21M4I8M7I8M2I13M1I12M1D19M9D15M9D7M6I16M1D18M35I25M2D13M9I13M1D19M23I54M12D29M3I11M2I26M3D19M7I36M4I14M14D20M1D92M32I26M1I108M1I23M1D90M4I26M13I20M 835/1251 66.7% 1473/94230402 0.0% 294/1251 23.5% 114070254 76144301 +16818 chr4 + 190214555 146842789 146842788 146843221 433 ATTACTTTGAGGAAAAAAGG--GCAAAGATACAGATTTATACTTATGCAA---TGAGAAATACAGAAATAAAAAATCAAGTTTGCCATC----TTGAGCTTGAAATCATTGTCAAATCTTATTGGAAATACATTTATTCTGATTTCTGGCAATCTAACCCCCTTTAGCCGTTTCACAGTTGGTGAGCAGAGAGGATGTTTCTGCCTCATTTACAGTGTCTGAACATGATTCAGACAATCAACTGCAACATTAGTCAAAGGAATCAGTGGCTAATGATTTCTGACAAGCACTGCAGTAACAGGCTGAGGACCAGACTGGGCAGCCATAGCATTCAGGGATGTTTTAG--AGGAGCCAGCAAATAGGCACTGGTGGA-AGATAATACACATGAAGGCAAATAGCAGTGGCCCCACATCACTTAAAGGCTCTTACATACTTTATGAAA chr4 + 94230402 32768010 32768009 32768436 32768010 32768009 32768436 427 ATTACTCTGACAAAAACATGATGGGATAATATTGATTTATAATACTCTAACTTTAAAAAACACAAAACCA------CAGTTCTGCTCTCAGCTTTGCACTTGATATTATTGTCAAACTTTATTGGAAACACATTTATTTTGATTTCTGAAAATCTAACAGAGTTTAGCCATTTCACGGCTGGTGAACAGTAAAGATGCTTCTGCCTCATTTACAGATCTTGAACATGAATCAGACAATCAACCGCAACATTAGTCAAAGAGAACACTAGCTAATGATTTCTGACAGGCACTGCAGTAGCAGGCCAGGGCCCAGCCTGGGTAGC---AGCATCTGACAATATTTTTTTCTAGAGCCAAC-AATAGATGCTGGAAGATAGAAAATAC------AATCAAGTAATGCCGGCCTTGTACCGCTT--CGTACCCTGTATATTTTCAGAAA ......:...x:....x.x.--.x:.x:...:x........x.xx.x:..---.:.:...:...:..x:.------..:x.:...:x..----...x:.....x..:.........::..........:.........:.........:x........xxxx.......:......:.:......:...x:.:....:.................xx::.........x.............:................::.x..x.:.................:...........:.....:::..x....x.....:...---.....::::x:..:....xx--x:......:.-.....:::....x:..-...x.....------.:x...:..:::x:....::::.:.:...--x.xx:.:.::...:...xx.... 20M2I28M3I17M6D13M4I230M3D20M2I10M1D16M1I9M6D29M2D23M 305/415 73.5% 427/94230402 0.0% 30/415 7.2% 114074779 76139776 +69764 chr4 + 190214555 146846899 146846898 146848679 1781 TGTACAATTTGATATCCTTTCCACCTCAGGCCATTATTCTGATAAACTCGGTA--AACCCTAATTTAGATCCATGATGTAATGCTT--CCATATCAGGCTGTGTGAACATGTTCCTTTAAAATAAAACATGGTAGGAAAGTCTTCCACTGAATGCTTTCGCACAGAAGAAGCTTCGTCTATTACCCTTTCACAGTGATAGAAGAGACAAGATAACAATTTATGAGTCATTTCCATTCTGACAGGAGCGACAATGACTGGAAATGCGATGCCTGCCAAGAGCTTTTATCAAGTAGGTTATAACAACTAGTAATAAGTGTAAATAATAAATGTCTGGGATCTTAGGGGAAGCGGTGGCAATAGGAAATGATTTTTGGTACTT-CTGATGGGGTTCTGCTACTCTTGGAATTCCCTGGCTTCCCAGTAGAGTTTTGGCCTGACAATAAACAACAGTTTAGTACTTTATCTAATCCCAGCCAGGAGGTGAGTTCAACAGCAAGCTTTTGCAGATGTTCACATTCAATAATCTATCCATAATTGATGAAACAGGGAGGTCAGATGTAATGGCTGCTACTATTCCAGCAACAAATAAATGGTTATTGACAAAACAAGCCAGTGTGGTGCAGAGTGCTGAGCAGTGACAGGCAGGAGCCGGCACTGAGGCAGAGACAGGGAGGACTATGCGGCTCTTCATCTTGAGAATTCCTCAGCGAGCCATGT-GCAGAAGGGCCACACTGACACAGAAGCAGATGGAGGTGACTTGTCAGGGAGAAGGGAGGCTGCTGAAGTACAAAAAAAGATGAAGACATGCCGAGGTGGAGAAAATGCT---GAGTGAGCCACGGACAAGGCTGGGGACCAGGGTAAGTACAAATGCATCGAAAGTTCAGAAGTGCCTTTGAATGCTCGCACTGTGATCCAGATGTCTGAGTTGCTTTTATCACGCAG-CGTGTCTTCACTCGCATACC-TGCTGTCAAACTG-TGCAGCCTGGATAACTCCAAC--ACCAAAGTGGATGTATGGG-ATGCTTTGGTGCCTA--AATCCTCCCACTGAGGGAACTTCACAGGTACT-----GCGTTTAACAGTGTGGACTGT------------GGATACCTTTTCCTCCCCTATGCATTTTTTTTAAAAGTCCACAA--AAATCACTTGTACAACTTTAACAATATTTTCAGATGAACTAAATATACAAAATTGTAAAGCTACAAAGTTTCTCAACACTGGAACTAACCTGAAATAGATGCTGCTTAGAATCAAATGTACTGGAAAGAAACGTGAGTGGAAGGCAAAGTTTTCTTTAATAACAGAAAACACACATTATACTTTCTTCACCTCAGCCTATGCAAAGAGTATAAT-AAAGCATTAATCGAGTATACTTTTATTGACTGAATAAAATTCAAGATATACTTCCACAAATAAGCAGCTGAAATCCTGTACTTCCATTCCAATGCTAAGAAATAATGTTTTTACACAGTTTACTGTGTAATATTATAAGATGAAGAATGGTAGGATAAAATGGTAGTTATTATTGCTATAGGTAGTCATAAAGAGGCTTGGGACAGAGAAGTTTTAAATATTAATATTCATAAAATCACTTAAATCAATTTAACACTCTTTAGTGGTTTATTTAGAGGTGTGATTTATTTTATTCTTTGCAACCAATGCCTTTGATCAGCTCTGAAATAACATACAAGCTGAAAATAAAATGGCAAAACAAACTGCTGCTAGCATTCTTATAGTAAGCTTTAGGTTTTATAGCAGGAACTGTTA-TATTTGGTGCTTTTGAATTACTTATCAAT chr4 + 94230402 32770278 32770277 32772027 32770278 32770277 32772027 1750 TGTACAATTCAAAATCGTTACTGCAAGAGAC-ATTACTCGAGTAAAGGCTGTTGTAATCTTCATTTAGTACAGGAACGTAATGTTTTTCCAAACCAGCCACTGTTGGCATATTTTTTCAAAATAAAGCATGGTTTAACAGTGT----------------GGAGTGAAGAAGCTTCATCTGTTACCCTTTAACAGCAATATAAGAGG-AAAATA-CAGTTTATGTATCCTTTCCATCCTGACAGATGTGACAATAGCTGGAAACACTACGCCTGCCAAGAGCTTTTATCAAGTATGTTATAACAACTAGTAATAAGTGTAAATAATAAATGGCCACAATCTTATGGGAAACGGTGGCAATACTAAACAATTTTTGGTGCTTGCTGATGGGAGTCTGCTAGTCTTGGAATTCCCTGGCTTCCCAGTAGAGTTTTGGCTTGACAATAAACAACAGTTTAATACTTGATCTAATCCCAGCCAGGAGGTAAGTTCAACAGCAAGCTTTTGCAGATGTTCACATCCAATAATCTATCCATAATTGATGAAACAGGGAGGTCAGATGTAATGGTTGCTACTATTCCAGCAACAAATAAATGGTTATTGACAAAACAAGCCAGTGTGGCGCTGAGTGCCGAGCAGTGACAAGCATGAAACAGTGCTGAGACAGAAGTAGTGATGTGAATACAGCCCTTCATCTTGAGAATTCCTCAATATGATATGTGGCATGAGGGCCACTCTGACACATAAGCAGATGGAGGTGACTCGTAAAGGAAAAATGAGATT-CTGCAACGACATAAAAGACAAAG----GCGGAGGCAGAGAAAGAATCAAGGAGAAAGGGGTGGACAAGATTGGAAATTTGGGTAAGTGCAACTACGTGAGTTGTTCAGAAATGTTTTCGTATAGTATCACTGTGATCCAGATGCCTGGATTGCTTTTATCACACTGTTGTATCTACATGAATGTACCATGCTGTCAGACTGCTGTAGCCTCCTAAGACCTTACTAACCATACTGTATGCATGTGCATGCTTCGATGCTCATTACTTTTTAGACAGA-GGATCTATAAATGTTCTCCTTCGTGCTCAATAATATATTTAGTCTACTCATTAAAGGATATTTTTACCTACAGAAGTTCTCCTAGCCAAAAGCAAACAATCAAATCCTT---------------ACATTTGCA---TAACACAATGGAAAAAATTATAAA-CAAGAAGG--TATTAAAAATGTAAGT---------------CAGTTAAAAACTTATTTTTCTATATAAATATGTGGAAGTAAGGAAAAAGTT--CTCAATCAGATGAAA---ATCTCATATTCTTTGAGTTTTAACCCATGTGAGAAACATAGTAAAAGGATTAATGGACTGT--TTTTATTGACTGAATAAAATTCAAATCATTTACATGCAAACACTCACTTGAAATCTTTTGCATCCATTTCAGTGCTAAAAGATAGTATTTTTACAATTTTTACTATGCAATATTCTAATATGAAAAACGGCAGAATGAAACGTTGGCCATTATTGCTATATGTAGTCATAAAAAGATTTCAGACAGaaatattttaaatattaatattaCTAAAATCACTTAAAGCACAAAGGAATGTTAAATCGATTTATTTAGAAGTACAATTTATTTCACACTTTGCTACCAGTTCTTTTGATCAGCTTTGCAATAATACATAAGATGAAAGAAAAACAGC-AAACAAATAGCTTCTAATAACGAAGCAGCAAGCTCTAGGTTTTACACAGGCAAATTTCAGTGTTTTAACTTCTCAGGTTATTTATCTAT .........::.x...x..x.::.xxx..:.-....:..x::....xx.x..x--..:.:.x......xx.x:x:.:......:..--...x.:...x.xx...x::...:..::..:........:......xx:.x...x.----------------.x.xx...........:...:.........x....::...x.....:-..:...-..:......x:..x.......:.......:x.:......::.......::.x.:.........................x....................................x.::x:......x.....:...........xx...::.........:...-........:x.......x....................................:....................:.....x.....................:.................................:...............................................:.....................................................:..x......:...........:...x..:x.:.::.....:....:::..x..x.xxx..:.:..:.....................:::x.x:....-...x:........x........x..................:..x.:...:..:x...::.-...x.:::xx.x......::...----..x....::......:x:::---...x:..xx::.......::...::.::x........:...x.:.:.x::xx........:..::..:.x..:x.xx................:...::.............:.x.-:..:...x..:xx:::....-........:....-..:.....xxxx.:x:.:x..--....x.x..x...:...x.-......:.:...::.--.x.::.:xx..x..-...x..x:.x.x..x..-----.:.:.:..:.:.:.:xx:x..------------.....::...x...x.xxx.xx:x.::.xx::.....:xx....--.....x:.---------------.:....x..---x...xx...:x.x......:....-.x.x..:.--.x.:..x.x..x..x.---------------.x.:.x.:..::x.x.x.x..:x.x.:.x.:...::x.x....x...:x..--:.:...x.x.x:...---.:x.:...:.:.:.xx:::.:.:..:...::.::.::...:.-....x......x..x.:.--........................:x:..x:x:x::....:.xx..x:.......:.x.:.x......:..:......:.:...:.:........xxx......:..:......x...x.....:..:..:..:..:...:.x.:.::............x...........:..::..x:......:.x:.................xx..............x..xxxx::x.:x:.xx.x:.:..........:..:::........:.:x......x....:.x.:...........:..x.....:.:.:...x.....:x....::..-.......:x...x...::.x:xxx::..:.....:.........:.xx:.x..x.x.:.-.:...x:xx:.:.::::...:.....x.. 31M1D21M2I31M2I55M16D47M1D6M1D166M1I338M1I61M1D23M4D20M3I116M1I20M1I13M1I21M2I19M1I15M2I14M1D17M5I21M12I44M2I8M15D9M3D24M1D8M2D16M15D51M2D15M3D42M1I18M2D334M1D59M1I29M 1252/1712 73.1% 1750/94230402 0.0% 107/1712 6.2% 114076621 76137934 +30729 chr4 + 190214555 146857161 146857160 146857763 603 TTAATGGTTTTAAAAAACCCTTTCTTTTGCACATCAGACACTGAATATTTTGAATAT---------TACTTAGCAAAACTT--ATGAAATGAAAATAAGGTAGGCGCTGTTTGTGTACTAGTGGAAGAGTGTGTGTGTGTGTGTGTGTGGAGGGTAATGCTAAATAGAAAGAGGT-CTGAGCCACAACAGTTGGGGGAAATGGGATCTGTAACAGCTGCTCCTTTTAGATTCCCCAAGAAAGAGACTGCCTGAGGTGGGCCACAGGACAAAAGGATAAAGCAGATGAAAACTCTGATGTAAAGCAGGAAAATGACTGCTGAGACCGCTGAGCCTACACCTTGAATCATCTCAAGCTGAGTGGCGAGCCCTCTTTAGCATGCCTTAGAAGCTGGTGATGAACTACACACGACCAGGAGGCAAACTGGCTGCAAGCAGGCTTGTCTGCATGTTATATATTATGATAACCAGCCATCCTCTGGGAGAAGGG-GCCATGATTTCCTCTCTGGCAGCATCTGAGCTCCCCTCAGTTACCCAGACCATTAAACCAAGGATGGAAGGGTAAATTTTAGGTAAGGATTTCTAACTGGTGAGTAAAGACAACTTCTGTTTAATGG chr4 + 94230402 32778038 32778037 32778627 32778038 32778037 32778627 590 TCAATCATTTCAA-----CCTTTAATTACTGCATCAGATAATGAATATTTTGAACATATGCTTCTCCACTCTAGAAGACATGAATGAAAGAGAAACAAG----------TTTATATGCTACTG--------TGTGTGTGTTGGGGGAGGGAGTAGCACGCTCAGCAGCAAAAGGAACCGAGTGGCAACAATTGGAGGAAATGGTATCTGTAACAGCTGCTCCTTTCAGATTCCCCTAGAAGGAGACTGCCTGAGGTGAACCACAGCACAAAAGGATAAAGAAGATGAAAACT--GATGCAAAGCAGGAAAATAACTGCTGAGACCCCTGAGTCTACACCC-GAGTAGTCCCAAGCTGTGTGGCAAGACCTCTTTAGCATGCTACAGAAGCTGGTGATGAACTACATATTACCATGAGGCAAACTGGCTCCTAGCAGTATTGTCTGCATGTTATGTGTAATGATAACCAGTGGTCCTCTGGGGATGGGATGCAATGATTTCATCTCCGTAAGCATCTGAGCTCCCCTTGGATACAGAGACCATTAAACTGAGAACAGAAGGGTAAATTTTAGGCAATGATTTCTAATTGGAGAGTGAAGACAACTTGTGTTCAACAG .:...x:...:..-----.....xx..xx::.......:.x.............:..---------:...:x:x..:..x.--......x::...:...----------...:.:.:...x..--------.........xx.x.x:x....x:xx.:...x.::..x..:...x-.:...:x:.....:....:........x.....................:.........x....:................::......x..............x...........--....:.............:............x.....:.......:-..:.x:..:.......x.....:..x..............:x:.....................:.:x....x..............x.x.....xx...............:.:.x...........:x:.........::x:..:-..x........x....:.xx.................::.x...xx............::..:.::.................:..x.........:...x....:..........x....:..::. 13M5D39M9I15M2I16M10D14M8D44M1I116M2D46M1D147M1I127M 460/577 79.7% 590/94230402 0.0% 39/577 6.8% 114079123 76135432 +4770 chr4 + 190214555 146858096 146858095 146858301 206 TGGTATCTTACAGT----TGAGAACTGTTTATAATTTAAAG---------------TGTAAACACACATTTTTAAATTTTGGTCTTCACAAAGACACAGTGAAGCTGCCATT--AGTATTGTTATTTCACAAATG---AAACTGAGCCTCCAAGAAGTTAAGTGACTAACCTAAGGTCACACAGCTAGTGCATGGCAGACAGGACTGAAATCCATGTCTTCCAGCTCCAA chr4 + 94230402 82283009 82283008 82283229 82283009 82283008 82283229 221 TAGTATCTTGCAGCAATCTTAGAATTGTTTATGAGTAAGGAGTTCTTGATTCCCTCTGAAAATAGGTAT----AGAACTGGGATTTCACAAAGTTCCTTCAAGGTTAGCATTGTATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGT-----GAGGACAATTCAGAAGTCCCCAGTCTCCTGCTCTAA .:.......:...:----.x....:.......:.x.x.:::---------------..x...:.x::..----.:.x:.x..x:.........x:x.xx::.:.:.:x....--.x...x:.:......:.x...---......:.x.x.x::x.::...........................:....-----.x:....:xx.x...:...x::x::...x....:.. 14M4I23M15I13M4D39M2I21M3I51M5D36M 133/197 67.5% 221/94230402 0.0% 33/197 16.8% 64575087 NA +5167 chr4 + 190214555 146867481 146867480 146867653 173 TTAAAAGTTTAGCTTACTGTTAATGCTGTTTCATATTCCTCAGCAGCTAAGTGTGCTAAGCCCAAGTAGTAAGAGGCTTCCGCTTCCATCTTTTTGTCACTTCCTGAAGTGAAGATGTAAA--AAAATTACCA----AGTATTCAATAAATGATTTATTACAACAAACAGAATCCTTGC chr4 + 94230402 32780478 32780477 32780650 32780478 32780477 32780650 173 TTAAAA--TAAACTTACTGATAATGCTGTCTTATCTTCTCCAGCAAAATGATACACTAAACTTAAGCAATATGCAGCTTCTCCTTCCATCTTCTTATCACCTCCTAAAGAAAGGATTACAGTCACAGTTACTAGTGTAGTCTTAACAAAATGACATA----AGCATAGACAAACCTTGC ......--.x.:.......x.........:.:..x...::.....:xxx::.:::....:.::...:.:..x.x:.....:x..........:..:....:....:...x:.:...xxx.:--.x.:....:.----...x..x.xx......:x..----.:..x.x.x..x...... 6M2D113M2I10M4I20M4D18M 115/167 68.9% 173/94230402 0.0% 12/167 7.2% 114087003 76127552 +3203 chr4 + 190214555 146869077 146869076 146869148 72 ACAGTCTGTGGAGCTT----TAAGTAAAAAAAAAAAAAAAAAAAAAACCTCTTTTCTTTATAAATTACCCACCCTC chr4 + 94230402 14776390 14776389 14776465 14776390 14776389 14776465 76 ACAGGTTATGAAACTTGATTTAAACAAAAAAAAAAAAAGCAAAAACCCCTCTATCTTTTATAAATTAGCAGCTTTC ....x:.:..:.:...----...::.............:x.....xx.....x.::...........x.x:.::.. 16M4I56M 53/72 73.6% 76/94230402 0.0% 4/72 5.6% 132092687 58121868 +21810 chr4 + 190214555 146874440 146874439 146875011 572 ATCTTACCTGCTCACTTTAGGTTCTTTGTTTTACAACACTACCCCCAGCGGATTG---TAATTTTGGAGATAAAGCTTTCAGGAAACTAATGGATTTCTTGTTGTCAGCACTAAGGCACCTTCGTTTTACAGTGAAATTTGAAAGTAAATTGATGGCATTTGTCTTTGCATTTCATAGGAAATAATCACCC----TAACACTTGACGATTTTTACTTCACTCTTGGGAGAAACAGTGTCTACCCATTAAAGAAAGCAATGTGAGAGAGTTCTTTTCCACCCACCTTCTTTGGCTATTTCAGAAGCTTTTATTAGAATTTTGATGGCCTGTTTGTATTCTTTATTTTCTAGCATTTTGTCTGAGAGTAATCTGTAAGTCCTCAGGAGACTCTCACAGGCCAACAAGTTGAGAGAGCGGCCTGTCTCATCCTTCCATATCCGCCCCTGTGTCAATTGATGGAATGCTTCATAATGCTCAGCAGCTTCCAGAAGCTGACCTGGAGAATAAAAGCCATTCATAAGTATAAACCAGAGGACGGAAC-GTATTTTCAGAAATTTTGCATACGTTTTAGCTTTATTA chr4 + 94230402 32781597 32781596 32782167 32781597 32781596 32782167 571 ATCTCACTTGCTGGTTATGGGTTTATGGTTTTATACCATTACTTCCACTAGGTTGGGTTTTTTTTGGAGATGAAGCTTTCAGAAATCTAAAAGATTCTTT--TAGAAGCAAAAAGGC--CTTCCTGTTTCAGTTACACCTAGAAGTGTATGGATAGCAATTTTCTTTGACTTCCACGGGAAATAATCACTTAGTTGAACACTTCACAATTTCCACTTTACTCTTCAGAAAATCATAGCATGCCCATCAAATAAAAGTACATGAAAATGTTATTTTAAACCTACCAGTTTTTGCCATTCTGATAGCTTTTATTAATGTTTTGATGGCCTGTTGTTGTTCTTTGTTTTCTAGCATTTTGTCTGCTAGTAATATATAAATTCTCCAAAGATGCTCACATGCCAGTGAATTGTAAGTGTGGCCTGTCTCATCCTTCCACGTTGAACCTTCTGTTAGCTGGTAAAATGCTTCATAATGCTCAGCAGCCTTCATGACATGACCTGAA----AAAATTCATTCATAACTGC-AACCAGTGTAATCAACAAGATTTTGATAAGTTATTAGTGCATCATTTTCTTATTA ....:..:....x::.x.:....:x.x......:.x..:...::...x::.:...---.xx..........:..........:..x....x:....::..--.:xx....xx.....--....x.x..x....x.x.::.::....:x..x...:...x..x......xx..:..::............::----x.......x..:....::....:......x:..:..x..xx.:x.:.....:...x...:xx.::...:.:x...x....xx...:...xx:...x..:...::::x...........:x:...............xx.:......:...................xx......x.:...:.:...x::...:x......x....:::.:...x:..x.:...................::.:x:x..:.x...:.::..:.::.......................:.:..x:.xx.......:.----....x:.........x.::-......x.x.xxx...-:x.....x.x..:..x.xx:.:.:.:x.xx::...... 55M3I42M2D15M2D72M4I306M4D19M1D16M1I38M 394/563 70.0% 571/94230402 0.0% 17/563 3.0% 114092843 76121712 +3960 chr4 + 190214555 146876796 146876795 146876878 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGGGAATCGCTTGAACCCAGGAGGTGGAGATTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:..........:::........x.xx.x...x.:...........:..x.xx:.::...:. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 70843599 NA +49613 chr4 + 190214555 146880589 146880588 146881714 1126 TAGATATTTGTTGTATCACAGCAGATGTCTAGAACAAATATTAAGCAAAGGA--------------GAATGT----ATATGATCTCTCCCATTTTAGCTTTTTTTTAAAGTAGGAAGATTGACTAGATATTAACACAAATGGGTTTAAATGTGAAGCTGCCATAAAGGCAGGAACATAAATGTAATTCTCCCAGCCGCTATTTTGATGCACATTTTTGATTCTATGAATATTTTATGAAATGGCCCAAACTAAAGCCATATAACATTCCTGTATTACTGATGCTTGCGCCCGTAAGCTACGAACATTAGAGGCATGATTGAGTGCATTAAAATGAACTCATTCAGCAGTGCATTGATTACTTGAAGGGGGAGGGAAACAAAAAAAGAAAAAAAAGGAAAAAAAGAAGTTGCTC-CACTTAAGAAAACAGCATACAAATCTAAAGTTTGCAACGCAATAAGGGCAAA-AGCAAGTTTAAATAAAATAATATCT----CATAAATACAGCATGACTCTGTCCAGA----------------TCTGACATTAATTAGACAAGGTGTTAATTATGTCCAAAGATGGCTGCTGGTATTGTTCAGGTAATTTAAAATGTCACAATCTCTAAGACGCATAGACTGGTCTGTTTTAGCTCCATGCATCAGCA--ATTCTGAAAATAGCTAATTATTTCCTTTTCTATCGACTTGTACATTTGCCAGTAAAAACAATGCTGCAGAAACAATTGCATAAAAATAATTTGACAGATCCATAAGACCTATTTCTTCAGCAGCACTGGTATAAGTCT--TAAGCATATTTAGTTCAAAATTGTGCACATTTGCTGAAGACTTTAGGGAAATATTCCACTTTAGTTTAAAACAACAACCTAAAGGAACAATAAAGCTT-TACGTGTATTATATTACATTTTAATCTAGAGCTACTGGACATCTTTGGTGTAAATTACTATTCTGTACAACATAGAGATAAAATCTGCTAGAAGCAATATTGAACAGTAGCAAAAAGGGAAAAATGTTATTGCCCCTTTGCAAAAACAAAAGACACTGCTTTCCATTTTGGCTTAACTGCATGAACAATTTATATTATCTTTAGGTTTTTACATTTAATTATGATAATTATAACGGCACTACACATGCTGAAATAGTTAAGGGCTT chr4 + 94230402 32786154 32786153 32787246 32786154 32786153 32787246 1093 TATATATTTGTTATGTCAAAATAGATATTTTGGACAAATTTCAACCAAAAGGTTGACTACTACTTTGCATGTTGGGATTTGCtttttattttttta---ttttttttGAGTAGAAAGATTGACTAGATATTAACACAAATGGGTTTAAATGTGAAGCTGCCATAAAAGCAGGCACATAAATGTAATTCTCCCAGCCGCTATTTTGATGCACATTTTTGATTCCATGAATATTTTATGAAATGGCCCAAACTAAAGCCATATAACATTCCTGCATTACTGATGCTTGCGCCCGTAAGCTACAAACATTAGAGGCATGATTGAGTGCATTAAAATGAACTCATTCAGCAGTGCATTGATTACTTG---------------------AGAGAGAAAGAAAAAAAAAGAAGTTACTCTCACTTAAGAAAACAGCATACAAACACGAAGTTTTCAACAGAGAAATTAAAGATAGCAGGTTTGAATAATATTGTATTTAACAAATGAATGCAGTGCAAAACTGTCTGGAATTCCTTATATACAATGCTGACGTTAATTAGGTGAGATGTTAATTAGGTCCACAGATTGCTTCCAGTAGTGTACAGGTAATTTAAAATGCTGCAATCTGCTAAACGCACTGACCGACCTGCTCTAGTGCCATGCCTCAGCAGTACTCATAGAGCACCTAATGATTTCCTTTTCTACCCGCCTGTATGTTTACCAATGTAAATCATGCCACGGAAACTGTCGCCAAAGAA----GTCACAGGGCTATTAGG--------------AGCACTAGTATATATTCAGAAAGCACATTCAGTTCTCAATTGTAAACATTTGTTGAGGACTTTA-GAAAATAGTCCACTTTAGCTTTAAAC---------AAGGAACAATAATGTTCACAATAAAATTCTGGCGTGTTTTAGTCTAAAACTA--GGACATCTTT--------------CACCATATCACGTGGACTTTGAATCTAATACCACTAACAGTTAATGATAACAAAAAAGAAAAAAAGTCATTACCATTTT---------AAAGATATAGGTCTACATTTCAGTTAAACTGCTTGAACTATTTGTATTATTTTTA-TTACCTACATTCAGTTATGATAATTATGCTAGCACTATTCAGGCTGAAGTAGTTAAaaacct ..x.........:.:...x.::....:.:.x.:......x.:..x....:.:--------------.x....----..x..x.:.:.x::x.....---.......x:.....:....................................................:.....x.................................................:................................................:............................:..............................................................---------------------...:.:...:::.............:...-.......................:x::......x....:x.:x..xx:x.:.-....:....:.....x..x:...:.----x..:...:...::::.xx.....::..----------------x.....:........:::..:.........x.....x....x...x.::...x...x................:::......x:x.:.....:x...:.::...:.:...:x......x......--.:..xx.:.::.x.....x.............:.x:.:....::...:...:.:x...:x....::.:.....x:.:..xx..:..----x.x....:x.:..x..:--------------......:.....x:.::--x.....:...:.....xx......:x.......:...:.......-.:.....x..........:..x....---------............x.:.:-:.xxx:x...x.:x::::.....:....:.:...--..........--------------:x.::..:x..:.:..xx.x:.....:x..xx.x:..:.x.x..:::..:......:.:.....x..:...:..x:...---------.....:.:x.x.:.x.....::.:.x......x.....x....:......:....-x.x::......:.:.............:x::......:x..x......:.......:::.:. 52M14I6M4I20M3D264M21D29M1I52M1I25M4I27M16I125M2I86M4D17M14D17M2I45M1D26M9D17M1I34M2D10M14D79M9D55M1D62M 811/1048 77.4% 1093/94230402 0.0% 123/1048 11.7% 114094435 76120120 +3086 chr4 + 190214555 146880920 146880919 146880966 47 GCATTGATTACTTGAAGGGGGAGGGAAACAAAAAAAGAAAAAAAAGG chr4 + 94230402 78538155 78538154 78538201 78538155 78538154 78538201 47 GTATTTATTCCTGGGGGGGGGAAGGAAAAAAAAAAAGAAAAAAAAGG .:...x...x..x.::......:.....x.................. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 68342765 NA +30626 chr4 + 190214555 146883625 146883624 146884129 505 AGAGGAAATACTGCCTCCTGAACAGTTTATTCAGTGTAGCAAGAACTGTGGGCTCGGTG-CAACTATTCAAGATCTCCTTGCAAAGCTTTGAAAAAAGAAAAACCTGCTGCAGAGCAGGCACCTTTGAATGAGGCTTCCTCTCCGTGCTACTCGTTAAGCAGTAAATAATTAAAACACCCTGAAAAAGACAGGTAAAATACAAGCAGCAATGTCAGTATCACAGACATGAAAGAGAAGGGGAAGAAAATGAATTGAAAAAAAAGAAGCAATGAAATAATTCATTTGAAGCTCTAATAAAGTTTCATTTGCAGTCTTGTTTAAAGATATATCAGACTTTAGGGATGTAACCCAATTACATTTTTATTCTAAATTCCATTCAAAGATCTTGGACTTTGATTCTTTAACATAGATCAAACATGGTATAATTTTCTTGTGGCTATCAATACTTAAAAAGGATCTCTTCATTAAATACTATAAGGTCTTATGAACATGTACACATAGTAGA chr4 + 94230402 32790101 32790100 32790594 32790101 32790100 32790594 494 AAAGGTAACACTGCCTCCAGGAAAGTTTATCTAATATGATGGCAATTGCTGGTTCAGCGGCAGTAGTCCAAGA---CCTTGCAAAGCTTTAAAGTAAAAAAATTCTGTTAGTGAGTGGGCAGCTTTGAATGAACCTTCATCTCAGTACTACTCATTAAGCAGTAAATAATTGAAATACTCTGGAAAAGACAGGTAAAATACAAGCAGCAATGTCAGTA--ATAGACATGAAAGAGAAGAGAGGGGAAAAGAATTTAAAAAA-----GCAAAGAAATAATTCATTTGAAGTTTTAATAAAGTTTCATTTGCAGTCTTGTTTAAAGATATATCAGACTTTAGGGATGTAACCTAATTACATTTTTATTCTAAGTTCTATTCAAAGACCCTAGACTTTGAATCTTTAACACAGATCAAACATAGTATAATTTACTCACGGCTATCAATACTTTAAAATGATCTCTTCATTAAAGGCCATAA--TCATCTGGGCATGCACATAAAGCAAA .:...x..:.........x.:.x.......::.:.:.:::::x..:..:x..:..:.:.-..::x:.:.....---..............:..:x..:....x:...:.:xx...::....x..........:x....x....x..:......:.................:...:..:...:...................................--.:................:.:::.:...x.....x......-----....x..................:.:..........................................................:...................:...:.........:.:.:........x.........:...........:.........x..:::..............x....x...............x:.:....--..x.x..::....:...:.x..:.:. 59M1I13M3D142M2D41M5D212M2D26M 405/493 82.2% 494/94230402 0.0% 13/493 2.6% 114093524 76121031 +7832 chr4 + 190214555 146906227 146906226 146906426 200 TGATTGGCTTACTTTAAACACACCTTTGCTATAAAACAGCAAGT-------GTTTTATAAAGTAATTTAAATAACTCTAGGTTACTGCTCTGTAAGTCTCAAGAGATAGAACTGACCTGAGATG-ACTATTGTTAATGCCATAGCTTTGATTAAATGAACTTCACTGTGACCCTAGAGTGATGGTTCTTCCAATGAGAAGCAACGAGA chr4 + 94230402 32801425 32801424 32801628 32801425 32801424 32801628 204 TGATCTGTTGCCTTTGAA---ATATTTGCTACGAAGTATCAAGGCACTAAGACTACATAAAATTATGCAGATAACTTCAGGT-AGTGCCCTAGAAATCTCAAGAGATGGTACTGACCTGAGGCGGACTATTGCTACTGCCACGGCTTTGATTGAATGAACTTTAATGTGACCCTCCAATGACTATCCTGCTGGTGAATAACAATGAGA ....:x.:.xx....:..---.:x.......::..::.x....x-------::.x:.....:.x..x:.:......::....-.x...:..:x..:...........:.x...........::.-.......:..x.....::.........:.........:.x.........xx.:...:x:.:..x.:::...:x.:...:.... 18M3D23M7I31M1D41M1I83M 140/196 71.4% 204/94230402 0.0% 12/196 6.1% 114104802 76109753 +22306 chr4 + 190214555 146908867 146908866 146909321 455 TCCCTTTCCTTAATTCCATAAAGAC-GTTTAATTGACTG-GGTTGAAGTGTGCTAAGTTGTCTTAATGTTTCAAATTCATACATGAAACAATCTGGAATCTTCCCCCAGGAGCTCGGTGTTCTGGCTCCTTCTGTGCT-CTGCCCACAGTCCCACCACTTACCTTTCCTCTCAGCGTCCTCAGCCCTGGTCAGGTAATGGTACAGGTAATCCAGTTTATCAGGCTGCTCCTCCAGGGGCTTCTGCAGCCAGAAGAGGGACCTGACTCTCGCAGCCTCCCTCAGGGCATCCCACCGCTCCATCAGAGCGAAGAGCTCGGTGAAGGACTTATGATAACCATCTCGCAGCATGTCCACACAGATATTCTTCTTGTAGGAGTTCCTATAACTGGAAATATGAATCAGAACACTCTCAGGTTTATGTTAATCCTTTCAGTCTGCACGGTATTTTCATTCTCTA chr4 + 94230402 32809177 32809176 32809616 32809177 32809176 32809616 440 TCCTAATCATTTATTCTATAAATACAGCTTAGTTGACTAAGGCTGAAATGTGCTAAGATGCAGTAACGTTTCAAATTCATACATGAAACAATTTGGAAGCTTCCCCCAGGCATTCGCGGCTGCGGCTCCCGCTGCTTTGCTACCCACAATCCCCCCATTTACCTGCTCTCTGGGCTGCCTCAGCCCTGGTCAGGAAGTGGTAAAGCTGATCCAGCTTATCAGGCTGCTCCTCCAGGGACTGCCGCTGCCATATGGCTGACCCAGGCCCTGCAGCCTCCCTCAAGGCATTCCACTTCTGTATCAGAGTGAAGAGCTCGGAGAAGGACTTGTGATAACCCTGTCGCAGCATGTCTATGCAGATGTTCTCCTTGTATGATTTCCTGTTACTGGGAATAAGAA-------------AGATGGATTTTAAGCCTTTTAAAC----CCGTATTCTC-TTCTCCA ...:xx..x..x....:.....x..-.:...:......:-..:....:.........x..:xx...:.........................:.....x...........x::...xx.:.x:......:x...:x:.-..:......:....x...:......x::....x:..xx.................x.:.....x..x.:......:......................:..x.:..x....x.x.:xx....:::x:.::.............:.....:....:x..x:.......:...........x.........:........x.x............:.::.....:....:......x..x.....:.x.....:....x...-------------..:.xx..x....x.....:.:x.----.x.....:..-.....:. 25M1I13M1I98M1I260M13D24M4D10M1D7M 339/437 77.6% 440/94230402 0.0% 21/437 4.8% 114099690 76114865 +4329 chr4 + 190214555 146916636 146916635 146916722 87 GATTTCCAATGAGTTGACTGGTCTCTGGGGGCATCTACTGGAAATTTAGCAAACTGCAGTTACATCATGTAAATTTGGTAACTTTCA chr4 + 94230402 32812648 32812647 32812734 32812648 32812647 32812734 87 GACGTTCAAGAGGTTTAATGGTCTCTGGGGGCATCTACTGGAAATGTGGAAAACTGCAGTCACAACGCGTTAATCACGCCGCTGTCA ..:x.:...x::...x.x...........................x.:.x..........:...x.::..x...:xx.:x:..x... 87M 64/87 73.6% 87/94230402 0.0% 0/87 0.0% 114103988 76110567 +33705 chr4 + 190214555 146919814 146919813 146920493 680 TATCAAACTTTTATTAAAAATGAAAA-GCTGGAGAATATAAAGAACAAACTTAGTAAAAACAA---GTTGCATTATAAAGAAA-ACTTCAGCTCACTGCATTTTTTTTTACTAAAGTATGTCATACATTTTATCTTTGCAAGAATTTGACAAGTTTT-GCAAGTAAAATTCTGTTTCCTCTACACTTGCTAATAGTCATGAGAATCTGTAGTTTGCACCTTCCCATTAAAAATGTATTGTATTTTTTGAAATTATTCACCCCGCCTTTTATCCAGATCATGTCTTTGAAAGGAGGAAGTAGATAATAAATGGAATAATTCATGATTCCCCATTAAATATGAAACTTTCTTTTGCAGAGTTTAGAAAATGAAGTTCTACATAATGTACAAAAGTTGATTAGAAC-TTTTTTAACCTTTTCAAGAAAAAACCTTTCATACTAAACAACTACATGAGGAGCTTTCTCTGAGAAAGGTAAAACAATCAATTCTTTACAC----CTATAGGTTCGT-CATATATATTCTAA----------TGTTG-----------------------CCCCCT--CTAAACATATATTTCCCTATAATACTTTAA--ACATATTAAAAATAATGGCAAGAAAAATAGTATACATTGAGTTGTAAACATGACAAGTTTTTAAGAGAAATATAACGTTTAAAATACAAAGGGAAAAAAATCACATAAATTAAAAA-----TGAAAACAA chr4 + 94230402 32816818 32816817 32817527 32816818 32816817 32817527 710 TGTTGAACTATTG--AGAAATGAAAGCACCAGAAAACCGTAAGACCAAACTTAGTAAAAACAACAAGTTACATAAAAAAGAAATACTTCAGCTCACTGTGTTCTTCTTTATTAAAGTATGTCATGTATTTTATCTTTGCAAGAGTTTGATGAGTTTTTGCAAGTAAAATTCTGTTTCCTCTATACTTGCTAATAGTCATGAGAATCTGTAGTTTGCACCTTCCCATTAAAAATGTATTGTATTTTTTGAAATTATTCACCCCGCCTTTTATCCAGATCATGTCTTTGAAAGGAGGAAGTAGATAATAAATGGAATAATTCATGATTTCCCATTAAATATGAAACTTTCTTTTGCAGAGTTTAGAAAATGAAGTTCTACATAATGTACAGAAGTTGATTAGAACTTTTTTTAACCTTTTCAAG-AAAAACCTTTCACGTTACACCAATGTACAAAGAAGTTTCTTTACAAAAGGGAAACCATTCACTT-TCCACACTGTTCTGTAGATCGGTACCTAATTATGCTAAATCACACGTTTATTGGGCCTGAAATTCACAGAGATCATCCATCTGACCAAAAGAATGTCTCTCTA-AGTACTAAAATCTCTTTTTGAAAGTTGTT----------TAATAAACATTGAATCCTGGCCATGACAAG----TAAGATTGTTAGAAATT-----ATTCAGAGAGAAAAAAAATACATATTTAAATAATATTGTGAAAGCAA .:.::....x..:--.:........:-:.::..:..:xxx....x..................---...:...x.x.......-..............::..:..:....:.............::.................:.....::......-........................:...............................................................................................................................................:.............................................................:..............-..................-............:::..x..x.x.::.::.:..:x.....:.:x:.....x...x..x...x..-.::....----..:...:.:x..-.x..xx...x....----------.:...-----------------------..x:..--.:...x:x..:.:..:...-.:....xx..--x.x.x..:...:.x:.x----------..:..x.......:.:x.::x.........----.....xx:x..x..xx.-----..x..:..:........x:.....xx.x..x..-----.....:... 13M2D11M1I36M3I17M1I73M1I245M1I18M1D64M1D7M4I12M1I14M10I5M23I6M2I19M1D10M2I17M10D30M4D17M5D33M5I9M 547/656 83.4% 710/94230402 0.0% 78/656 11.9% 114102996 76111559 +4363 chr4 + 190214555 146929943 146929942 146930121 179 GAAAATTGGGATTAATAGTTAAAGCACAGAGCTTGAAG-----ATGCTAATACACACATACATATATACACACAAAC-------------ATGCACACATACAATATA-TATATATATATTTATGAAGATACACACTACATATATTTGTATGTGTGTGTGCATATATATATATATATATATATATATATATATATACA chr4 + 94230402 83540862 83540861 83541056 83540862 83540861 83541056 195 GAAAAGAAGGATTAAAAGATAAG---CATGGCTCCAAGGCAGCACATTTAAAATTACATGAATATAGACACACAAACCCACTGATATAGCATGATTATGTACATTGCAGTAAATGAATATATATAATCATAGAAAATACATATTTTTTTATGTGTGCAGGCACATATGCATATAAACTGAGATACATATTCATATATA .....xx:.......x..x...:---..x:...:x...-----.:::.x.x.xx:....:x.....x..........-------------...xx:.::....x.::.-..x..:x....x...:.xx...x.x.x.......x...x........::x...:....::.....x.:xx.x...:....x:.....:. 23M3D12M5I34M13I18M1I89M 120/176 68.2% 195/94230402 0.0% 22/176 12.5% 63389081 NA +16294 chr4 + 190214555 146937292 146937291 146937709 418 GGAGACAACACACCTTAAAATGAAGGTTAACAAGCAATTAATAGCACAGACTTAACTA-AATATTGCAAATGTGATAGTATAATATCTTGGTAAATATGGGAATTTTGAGAGCCATAAAATTAAAGACTTTGATATGTGTGAGATCAATAGACATGACTTATCACTATTTAATATGAGCTTTAATTTTTAAATGCCATGTTCCAATGAAAAAGTATATTACACAGGAAAATTGAAATTTCA------ATAAAGAATCAAGACAAAAGAAAC---AAACTT---TATATTAAAGTACCTTTAAAGGTTGTACTTACGCAGCAACTTCCTCTTTTGATAATCCTTTGAAATTTACCTCTAGATAATGATCTATGTCATCTTTTTCTTTGATCAATTGAGACCTAAATGAAATAGAAAGAAATAATAAAGCACA chr4 + 94230402 32824261 32824260 32824675 32824261 32824260 32824675 415 GGAAAGAGCACAATTTCAAATA------------TAATTACTGACACAATCTTAACTATAGTGTTGCAAACATGATG---TAATACCTCGGTAAATACACAAATTAATAAAGCCAAGGAGTTAAATGCTTTGATACGCTTAAGATCAGGAGAAATGATCCATCATTATTTAATATCAGCTTCAATTTTTAAATGCCAAGTTCC-ATTAAAAAGGGTAGGGCCTAGGGAACTTTAAATTTAAATGATTATGACGACTAGAAACAAAGGAAACAATAAACTTATGGATGTTAAAATGCCTTGAAAAAGCCAACTTACGCTGCAGCTTCTTGTTTTGACAACCCTTTGATATTCTTCGCCAAATAATCATCTATGCCATCTTTGTCTTTGATCAAATGAATCCTAAATTTAAATGAAAAAAATTAAAAGAAACA ...:.x.:....x:..x....:------------:.....x.::....:x........-.:.:.......::....:---.....:..:........::x:....xxx.:.....x::.:.....x:........:.:x.:......:x...x....:::....:..........x.....:...............x.....-..x......x:..xx:.x:...:..x..x......x.------..:.x..x.x:.:.....:.....---......---x..:.....:.:....x...::x:xx........x...:....:.x......:..:.......x...:x:.x.:.:.....x.......:.......x...........x...:x.......xx..xx....:....x.x..::x... 22M12D24M1I18M3D123M1D37M6I24M3I6M3I148M 295/402 73.4% 415/94230402 0.0% 29/402 7.2% 114113031 76101524 +13835 chr4 + 190214555 146943119 146943118 146943398 280 TGACATACATGGAGAGGGATATGTCTTCTTTGTCATACAGATCAACTGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAATTCTGAGTCAACGTTTCCTACCATTAAAGTTTCAGCTGCCAGTTCCTTCATTTTGCTCTCCTCTGATCTGAGAACATTAGCAGCAGGAGCACCTTTACTCTTAAATTTAGTTTAATGTAAGTACTGCAAGCCCTGCTGGCAAGCCTCAAGGCACAAACTCTGAATGGGGGGTGGTCAGAGCTGAATGATAAAGTGG chr4 + 94230402 32829483 32829482 32829738 32829483 32829482 32829738 256 TGAAGTACATAAATGCTAATAGGACTTCTTTGTCATAGAGAGCTACTGTG---------------------TTTTTTCCCCAAGTATTCAGCCTGCACTTCCTACCATTAAAGTTTCAGCTGCCAGTTCCTTCATTTTGCATGCCTGTGATCTGAGGACGTTAGCAGCAGGAGCACCCTCACTTTTAAATTTGGTTTAATGTAGGTATTGCATGCCCTGCTGGTAGGCCTCAAGGCACAAACTTTTAATAGGGACGGG--AAAACAGAAT-ATAAGGGGG ...x:.....::.x:xx:...x.x.............x...x.x......---------------------......::.x..:.x:.x..:.x:.::..........................................x:x...x.........:..:.................:.:...:........:..........:...:....x..........:.:.................:.x...:...:xx..--.:.:.x....-....:.x.. 50M21D187M2D10M1D9M 204/256 79.7% 256/94230402 0.0% 24/256 9.4% 114113636 76100919 +3954 chr4 + 190214555 146953652 146953651 146953788 137 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAAGGTCACTTGAACCAAGGAGGTGGAGGTTTTAGTGAGCTGAGATGGTGCCA--------------------CTGCACTCCAGCCTGGTGACAGCGGGAGACTCCGATTCAAAAAAC chr4 + 94230402 76033204 76033203 76033353 76033204 76033203 76033353 150 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAAGGC ......x......:.........:.::........x.xx.x:::x..........x..:..x.xx:..:.x...------:.x...:.....--------------------....x.-.....x.......x..:.::::..:x.:x...x..::. 74M6D12M20I6M1D38M 91/130 70.0% 150/94230402 0.0% 27/130 20.8% 70920448 NA +11654 chr4 + 190214555 146964273 146964272 146964631 359 ACATGACAATCAGTTTGGCATTATGGACTATAGTTGAAGAGGCAAATAAGTTGATAATAATAAATTAAGATTCTACAAAGGCAGGATTGACTTAGTTAAAGGATACAAACCGATAACCCTCACTGAGTTTTTACTGCAGGATTTCTCACTTCTCAATAGTAAATCTTATCTTTCTTTCATGAGGATGAAAAACCTAGAGCTTATGAGTGCCTCAGGCAAGTGAGTTTGAAGGTCTTCTTTG-GATTGAATGAAAGATAATAATCAAAATCTAGGTCAAGATATTATTTATTCTATAGAGAATTGTTTAAGCTAATGTTTTAAATTTAAGTCATAACACATTTTAATATATGATTCATACA chr4 + 94230402 32834582 32834581 32834915 32834582 32834581 32834915 334 ATGTGACATGCAGCTTATCATCATGAATTATGGGGGAAAGGATAAACAACCC---ATTAAGAAATTAAAGGCCCACAAAGG-----TGCAGTTTGATAAAGGATAAAAA------AACCCCACAGGGTACATATAATAAGATCTCTCCC--CTGAAGAGTGATTGTTATCTTTCTTTCATGAACGTCAAAGACCTGGAGCTTCTCAGTGCCTCAGGCAAGTGAGTTTGAAGGTCTCCTTCATGACTGAATAGAAAATAGTAATCAGAATGTACTTCAAG--ACTATTTATTCTGTAGAGCA---TTTAAAAAAATGCTTTATGTGTAG-----AACTGATATTAATAACTGATAAAAACA .::.....xx...:..:x...:...:.:...:.xx...::.::...:..x::---.x...x.......::x:.:.......-----.xx.x..x.x.........x...------.x..:...x.:..x:x..:x::.:...:....x.--..x..x...:.x.x.................:x:.x...:....:......x.x..............................:...::-..:.....::..:...:......:...x..xx.....--.:..........:.....x.---.....:xx....:....x:.x..:-----...xx..x......xx....xx.x... 52M3D26M5D23M6D34M2D90M1I37M2D20M3D24M5D27M 241/333 72.4% 334/94230402 0.0% 27/333 8.1% 114129691 76084864 +13521 chr4 + 190214555 146973524 146973523 146973860 337 ACTGAAATTCCCGTGGAGGCCATGTCAACGTTTCTTTTAAGTTGTATAAATATAAGCATCTCTTATTAATTGCTGTTGATTAGCCAAAAGGCAAATACTTAATTAAACATTGAGAGATAATAAAATTGCACATGAATTATCTATCTAAGAGCACATAGGTCCGTACATTTCATT-AAGATGGTTTAACTAATAATCATGTCTCTTACACCCAGTCCTTGTTTGAGCAGATAGATTGTTTTAAAAAAAGAAAAAAGTTCCCTAGAGGGAGGGTGTTGTTTTTGTTAAAGTCAT----------ATGTTTGTTGTTTTGTATTTACTTTTCTATTCATCCATGTTCTTTT chr4 + 94230402 32836360 32836359 32836688 32836360 32836359 32836688 329 ACTGAAATTCTAATGGA----ATTTTAACATTCCCTATAAGTGACATGAATATAGGCTTCATTTATTAATTGTAGCTGATTAGCCACAAGGCAAACATTTAATTAAACCTTGGGAGACAATAACATTGCACATAAATTATCCATTTAAGAGCACATAGGTCTTTTTATTTCATTAAAAATTGTTTAACCAATAACTACACATCTTAAGCTCAATCTGTGTTTGTGCAGG--------TTTAAAACCAGAAAA---TCCCCTAGTG---CATTGCTGGGTTTTTTTCAGACATTTATTTCTTGATGCTTTCTGATTTGTATTTAC-TTACCACTTGTTCATGCTGCTTT ..........:x:....----..x.:...:..:.:.x.....x::..:......:..x..x:..........:x.:..........x........:.:..........x...:....:.....x.........:.......:..:................:x.x:........-..:..x.......:.....::.:::x.....x:.:..:..:x......x....:--------.......xx......---.:......x.---x:x..:..xx...x..xx..x...----------...:..x:..x...........-..x.:.:.::.:....:.x:... 17M4D153M1I54M8D15M3D10M3D24M10I22M1D23M 240/318 75.5% 329/94230402 0.0% 30/318 9.4% 114137164 76077391 +12065 chr4 + 190214555 146976930 146976929 146977227 298 ACCAGCTGAGAGCCCCTCAAGTTAAATGCAGAGACTTTTATTCTTGTGTGCAGTTATTTAGACTGAAAATGGAAACGTGCAACTGTGAGGCAGATCTCATTCATGCATAATTGAAACACCCAAGGGTAAAATACTGAGGCACAATGGATGACATTTGATAAAAAGAGAGCAAGGAAAAAGAAGAAGTTAAAAACAAGATACAAGACCCTGGGGACCACAGAGAAGAATACCTGACATAGGCCAAATAATCTCAAATAAAAATATCCATATTACCACACAATGTAAATATAAAGACAAA chr4 + 94230402 32837886 32837885 32838170 32837886 32837885 32838170 285 ACTGTCTGTATGTCTGTGAAGTTAAATGTAGGTTACTCCATTCATGTACAAAGATATTTAGATGGCAAATGGAAACTAGCTGCTGTGAAGCGTACCACGTTCATATATAATTAAAGCACCCGAGAGTAAAATAGTGAGGCACAATAGGTGACAACTGATAAAAA-----CAAGG-----GAAGAAGTATAAAACAGGATACAAAACCCTGGGGATTATAG---AGAATATCTAATACTGGCAGAAGATCCTACGACAACTGTATCCAAATTACCAGATAATATGAAAATAATAACAGA ..::x...x:x.:.:x.x..........:..:xxx:.::....x...:::x..x........:x.x..........xx..x:......:..:x.:.x.:.....::......:..:.....:..:........x...........:.:.....x:.........-----.....-----........xx......:.......:..........::.:..---......:..:.:.:x...x:..x.x:..xx:.:..xx:......x.......x.:...:.:..x....x:...:. 164M5D5M5D41M3D75M 204/285 71.6% 285/94230402 0.0% 13/285 4.6% 114139044 76075511 +38623 chr4 + 190214555 146981128 146981127 146981794 667 ATCCAAATGTTCCAATTAGTTTGG--TGCTTTCATAATTATGTATAATTCGGTTGGCATGTATGCATGAAATGTTTATTTCCATAATTGTAACAAGCACTTAAATTAATTATACCATAACCTCTTGATTCTATGGGCCAACTGTTGAGTCTTTTTTTTTAATATTGTAGAATCAGCCCTTTTTATTTTTTGAATTTTCCCCCCGCCTTTGATGTGTTGTTTCTTATCCTT---GTTTGGAATTCTCTATGGAATATTCTCAGAATAATCTTGCAGTTTTCTTTTATGATTGAAACTTTGCATTTTAACAGTTGTCTGGAGATAGTTTCTTCCTTGTGAAATATCAGTTTTAATAACAGAAAAAGAAAAGTGCCATAAATCTGCACTAACCACATAAAGCTGAAGTCTCTGAGAGACTGATTAACACGGAGACTCTACACAGGTTTTTCAATAATTAGAGGATGTGTTTGCATGGAGCCACAACCGCTCAGGCCTTGAAGCCATTTCCCAGGGCAGCCAGCAATTATTACAGCCTGGAGTACATTCCTTATATTCTATGCCTCTAGCTATTGAAGCTGTTTTC-AAATAAAGGTCTCTTAATTTCACAAAAAGTTAACATCACCGTGGATGAACAACATTTTTCTGCTAATACCTTCACTACTTAGTTGGGAGA chr4 + 94230402 32840487 32840486 32841146 32840487 32840486 32841146 660 ATGCAAATCTCTCAGTTTGTTTTACTTCTTTTCACAGTTATGTATTATTCATGTTGTATTAGTACATGCACTGTTTATTTCCCTAATTGTAACAAGCACTTAA-TTAATTACACTATAACCTCTTGAATCTACAGGCCAACTGTTGCGTCTTTAGTT--AATATTTTAAAGTC------TCATCTTTTTCCATTTTTCCTTGTGTCTTTGATGTTTTGTTTCTTACCCTTCTTGTTTGGG-TTCTCTGTGGAATAGTCTCAGAATAATCCTGCAGTTCTCTTTTATGACTGAAACTTTGCATTTTAACAGTTATCTGGAGATACTTTCTTCCTTGTGAAATATCAGTTTTAATAACAAGAAAAGAAAAATGCCATAAATCTGCACTAACCACATAAAGCTGAAGTCTCTGAGAGACTGATTAACATTGAGACTCTACACAGGTTTTTCAATAATTAGAGGATGTGCTTGCATGGAGCCATGACTGTACTGGCCTTGATGCCATTTCTCAGGGCAGACAGCAATTATTACAGCCCACAGTAAATTTCCTACATTCTCTGCCTCCAGCCAGTGAAGATCTTTTTGGAGTAAAGGTCTCTTAATTTTCCACGCTCTTGTCATCAGCTTGGATTAGCAATG-TGTTCTGCT--TATTTTCATCAGCTGGTTTAGAAA ..x.....x.::..:..x....x:--.x:.....:.:........x....:xx.x.:..xx:.:....x.x...........x....................-.......:..:............x....::............x......xx..--......x..:.:..------.:x.x.....:x.x......::x:.:.........x..........:....---......:-......:.......x.............:.......:..........:.......................:..........x.................................::.........:........................................................:x......................................:.............::..:.:x.x........x........:........x.................::x....x...:.:..:.....x......:...:.x.....x.x....:-:.:.................:x..x:xxx..:x.....x.x.....x.:...::-.x.......--..::....::.x:.:...x:..:. 24M2I77M1D53M2D14M6D51M3I7M1D341M1I54M1D9M2D24M 540/654 82.6% 660/94230402 0.0% 19/654 2.9% 114140641 76073914 +3440 chr4 + 190214555 147009402 147009401 147009528 127 GTGACACACGCCTCTAATCCGAGCTATTTGGAAGGCTGAGGTGGGAGAACCACTTGAGCCCAGGAGGCCAAGGCTGCAGTGAATCA--------AGAT-TGTGCC-----ACTGCACTCCAGCATGGGCAATACAGTGAGC chr4 + 94230402 76033201 76033200 76033338 76033201 76033200 76033338 138 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAGC ...:::....--.x..:.:.x.....:...:.........x:xx.x...x.......:.....:..x::x:.....:..x:x..x.--------....-......-----x....x.-.........xx.x.:...x.... 10M2D74M8I4M1I6M5I7M1D23M 90/124 72.6% 138/94230402 0.0% 17/124 13.7% 70976201 NA +66651 chr4 + 190214555 147011921 147011920 147013424 1504 GATGAGCGCCTTGTCAGAGCACAAACATTTTGAAATCCCGATGAAAATGCAGTTTAATGCATCCAGTTAAATTGCCTGAGAGGAAATAGTGAATACAGCTTTCTTAAAGCCTTTTCCCTCAGGCCATTAACTAAGAAACTGGTCACTAACTGCTGGTAACAACCCGTTTTGGAGGGATTATTGCTATTATTGGCAT-CTGTGGTTTATGGCAACATTTTGTTAAAGACATTAGAAACGATAGTGCAGCTGGACTTGATATTTCAGAGAAATCAGTCCTTTCCCTTGTGGTTAATGGCCATTTTTTTCTT--CCAATCTAAGTGTACCGAGGCTGAGCTGCACTGCTGAGTTTATTATCTGCTGCATTTCTTGTTGCTCTAAGAAAGATGCTTTACACTGGAGTCAGCATTCAAATCAATGGAGCAAAAATATAACATTTATTGTTAGTAAA-ATTGAATCATGCTGAAAAAGGCTGAACGAATGCTTGACTTAAACTGGATGTTAGAAATCATTTCACTTGCCAT-GAGCACTTTGCAGCTGACACACAGCCACATGCTATTTTCTTCCAGTGATTAATTGTTAGCAGGAGCAGGCATATATAC-ATTGCCAAATGGAGAGTAATAACCAAAGTTATATTATTGATTTCCCATAACTCTGTGTGAACTTATATACCTAGAGAGGGG-----------------CCTGCTCTCTGTGGCTTATAGCT--GCATGCTGATAATT-CACTCTG-GTAATTCCATTCCCTGAAAACAGAATTAGAAAGGAGGTG--------GCCT---------------CGGTGAAGGGCAGGCAAA-CATCACACAAGGAAAGAAAAGTTCCAGAGAGTTTCAAAAAATATTTCTTTTGTTCACTTCTAATGGCAGAAACAAGTCAGAA----CCATGACAGGTAAAAACTATAAGGTATAAAATTGAGATTGAAGGCAGATTACAACTATCTTATTTGCATGGAGACTTTTTTTTTTTTTTGCTTTATTGGGGTCCATTTTTCCTCCTATATTTTAATCC------AAAAACAAAAGATCAGAACATGTCATTAGCTCTACTTCTTAGTGAACCTGACTTTTCTCAAGAAATTTACATCTTTCTCTCATTTTCTGTTAAGGTTTCTTACCCTGTTTTCTCACCTAAGGAATTATAATGAGGTAGAGTGAATGAGCTCTATGGGGAGAGCAGTGGACCCAGAGACTAAAGGTAAAAGGATGATTGATGGTATGAAATTACCATATAAGTACAATCAGGATCAGATTTTAAAATGAATTTTTAAGCAGCCTAAGAGATACTCTTTGATTTGCAGTCTGGTGGAATGGATAATGTCTCATTCAGTGGATAAAGTTTCTCACTGTGTTACTTGAGCTTTTTCTGATCTTTCTGACTGGGAGTAAAATGGAACCAAAGCCTAAAGTGGTTTTTAATGCAGAAAATATCAAACACAATATTCTTAATGTCAAAACCTGGGCATAGCAGGTGAGAAAAGAAAAATAAATAGTAGAATATTAC--TGTTAGTATTATTGTTTCAG chr4 + 94230402 32853480 32853479 32854965 32853480 32853479 32854965 1486 GACTAGAATTTTATCAGAGTACAAATGTTAGGAAA-CTCAATGAAAATACAGTTTAATGCAGCCAGTTAAATTGCCTGGGAGGAAACAGTGAATACAGCTTTCTTAAAGCCTTTCCCCTCAGGCCATTAACTAAGAAACTGGTCAGTAACTGCTGGTAACAAACCATTTTGGAGGGATTATTGCTATTACCAGTATTCAGTGGTTTATGGCTACATTTTGTAAAAGACATTAGGAACTGTTACACGGATGGGCCCACAGTATTGGAAAAACCATTCTTTTCCCTTGTGATTAACAACGGTTTTTTTCCCAGTCAAGAAAGATGTCTTGAGTGTGCACAG------TGGATTCATTATTTGTCATATCTCTCTATGCTGTAAAATAG--GCTTTTCATTACGGTCAGGATTCAAATGAAAAGAGTGAAAATATAATACTGATTTCTGGGAAAGAGTGATTAATGTAGAAA---------------CTAGATTTTAACTA----TTTCAAAGAATTTTAGCTGTCATTGAGGACT----GGTTGGCAGAGAA--ATATACT-TTCTCTTCCTGTGAATAACTGTTTCTTGGTGAAGGAATCAGTGCTACTGC---------AACAGTAAACAAGGGGAAA-----AATTTCCCTT--TGCAGCACAAATTTAGGTGTA-AGAAAGCAGTTTTGATCAGTACGTTTCCAGCACTCTACAGTT---AGCTTGGTATCCTAATTATTACAATTTGCATAATCCAA------------AGTATTTGCAAGGATGGGTCAGGTCAGCCTTATCATAATGGAAAGCGCAGAATGGTAGGAAGTTCAGTGTGGTAATTAGGAAAAGTTCTGTGGAGCTCCAAAAA-TCTTTCTTTTGTTCTTTTTTTTAAGGAACTCCATCTAAGAAGATACTTTGACAGCTTAGTTGTATAAATGATACTGTTGAGTTAGAATACAGATTGCAAACACGTTATTTGCATGAAAAATGTGTTTTTCACTCGACAC-------------TATCCCCATATCttttaatttttttaaaaaaaaCATAGATCAGAACATATCATTAGCTATGCTTCTTACTGAACCTGACTTTTCTCAAGAAATTTACATCTTTCTCTCATTTTCTGTTAAGGTTTCTTACCCTGTTTTCTCACCTAAAGAATTATAATGAGGTAGAGTGAATGAGATCTATGGGGAAAGCAGTGGACCTAGAGACTAAAGGTAAAAGGATGATTGATGGTATGAAATTACCATAAAAGTACAATCAGGATCAGATTTTAAAATGAATTTTTAAGCAGCCTAAGAGATACTCTTTGATTTGTAGTCTGGTGGAATGGATAATGTCTCATTCAGTGGATAAAGTTTCTCACTGTGTGACTTGAGCTTTTTCTGATCTTTCTGACTGGGAGTAAAATGGAACCAAAGCCTAAAGTGGTTTTTAATGCTGAAAATATCAAACACAATATTCTTAGTGTCAAAACCTAGGCATAGCAGGTGAAAAAAGAAAAATAAATATAAGAAAATTACAGTGTTGGCATTATTGTGTTAG ..:x..x:::..:......:.....::..xx....-.:.:........:............x................:.......:...........................:..............................x................x..:.......................:::.:..-.x............x.........x...........:...x:.x:::.:.x...:.:::xx:.x.::..:...:..x..:...........:....:::.x:........::--:...xxx.::...x::...xx..x:.x.------..::..:.....:..::::..:...:xx....x...:.x..--.....x..:.:x:.....x........x..x:...::.........:.:.x...x:.:.x...-.x...x.x...:x....---------------..x..:..x....:----..xx...xx....:.x:..:...-...x...----:.:..:..x.x.:--.:..:..-..:......x....x...:....xx:x..x.x...x..xx:.:.-.:...---------.::.:...x...:.xx.x.-----:.......x.--:x.x.::::..:...x:.::x-...:..x:.-----------------..x..x....:::.:.---....--.:..x..:..x...-..x.:..-:....:.x.------------..x...x.x.....x.x.--------....---------------..xx...x..:...x.:x-..x::::xx.:xx.:.........::x:...:.:......-.x............x:..:.xxx:.x.:xxx..xx.x....----.:x......x.x.:xxx.....:xx...xx:.....x.x...x:......:...x:.:x...........:.:.x.x.x.....:x:.:.x:x:-------------.x...:.x...x.......::------.....xx.x............:.........x.:.......x..............................................................................:...........................x..........:...........:.............................................x.................................................................:.....................................................x.....................................................................x.........................:...........:..............:................xx....x.....--....:.:........x.:.. 35M1D160M1I112M2I28M6D41M2D63M1I17M15D14M4D23M1I7M4D13M2D7M1D44M1I5M9D19M5D10M2D21M1D9M17I16M3D4M2I14M1I7M1I9M12D18M8I4M15I18M1I40M1D41M4I94M13D21M6I489M2I20M 1121/1423 78.8% 1486/94230402 0.0% 144/1423 10.1% 114158441 76056114 +63783 chr4 + 190214555 147014691 147014690 147015674 984 AACATTATGGAAATCTTTAACATTTCAGACAGTTGCTTTTTGTGACAGTTTCTATTTCTTCCCCTC-TGCTGACAGTTCCTATAATGACTTTAATCATAGAGTCTGGAAACGGAATCGGCTATTGAGTAGCAACAAACTCAATGGTCAATGTCTATGTCACTTTTCTGGGAGCAGGACTTTCTGAGCATCAAGAAGCTAATACTCAGAGCCTCCTGGAAAAGTGCTAAGTGCATTAACTCTCTGTCAATCACATCTGTAACACACAGGCCAAATTATTACTATTTGGCTCAAGACATTCCATTGAAACTTATTGGTGTGGTATTCTTATCTGTGTACTGTATATAACTAATGATGATTGTTTATGGAAAGGTGCCTGTCCAATTATTTTTGAAGAAACACAAGAATGCAGAATGACTGGAAGCATCAGGTTTTTGCCAGAGAATGCCTCAGGTAAGAGGAGAATGGCTAGAGGCTATAAGGAATCACAAGAGACAAGTCAGAGTCGTAAATTGGGAAACTGACATATCTCATCTAATATACTTGCTAACTAGGCCTTTAAAAACCTTGACATTTAACTAAGTTTGTGGGAAAGTTATGGGTTTTGTCCTTTTCTATGGGCTCTAACTCATTAATCCAGTGAATTAAGGTGATTATCATTGTTACCAACATTAGGAGA-TAACGGAGGGAAATGTTTAGAGAGGCGG-TGAGCTTCTCGCAGCGCAGCTGAGCAGCTGTTTACGCAGGCTGTGCCTGTTTCAAAGCCAAGTCAGTCAAAAATGATACTTCAAGTTATTTACCCTTTTGGTACTTCGGGGCTTGAAATGGCGTGAAAAGAGCCTTTCATTCGGCAGAGGCATTTAAATAAAGCTTTCCAAAGGCTGATGTGTTTGGAAGAGGGTGGGCTCTTTGCTGAAATAAACAAGTTTCTGGGGATTTTAAGAAAATAGGAA-----AGAAATGAAAACTTTCCAGTGAATGTCATCTACT chr4 + 94230402 32855729 32855728 32856715 32855729 32855728 32856715 987 AGCATTATAAAATAACCTAAGATTTCCAACAGTTGCTTTTTATGACAGTTTCCATTTTTTTCCCTCCTACTGACAGTTCCCATAATGACTTTAATCATATAGTCTGGAAATGGAGCAGGTTACTGAACAGCAACAAACTCACTGGTCAATGTCGGTGTCACTTTTCTGGGAGCAGGACTTTTTGAGCATCAAGGAACTAATTTTAACAGCCTGCTGGAAAAGTGTTAAGTGCATTAACTCCCTGTCAATCACATTTTTAGCATGCTGGCCGAATTATTATTATTTGGCTCGAGACATTCTATTGAAACTTATTTGTATGGTATTCTTATCTGTGTACCTTATGTGACTAATGATGATTGTTTATGGAGAGCTGCCTGTCCAATTATTTTTGAAGGAACACAAGAATGCAGAATGACTGGAAGCATCAGGTTTTTGCCAGAGAATGCCTCAGGTAAGAGGAGAATGGCTAGAGGCTATAAGGAATCACAAGAGACAAGTCAGAGTCGTAAATTGGGAAACTGACATATCTCATCTAATATACTTGCTAACTAGGCCTTTAAAAACCTTGACATTTAACTAAGTTTGTGGAAAAGTTATAGATTTTGTCCTTTTCTATTGGCTATAACTCATTAGTACGATGAATGGAGGTGTTTATAATCATTACCAGCATTAGCAGACTAGCGTACAGGATCATTTAGAGATCCAGTTAAGCACCT-----AACAACTGCTCAGTTGTTTATGTAGGTTGTGCCTTTTTCAAAGCCAAGTCAGTCAAAAATGATATTGCAAGTTATTTACCCTTTTGGTACTTCAGTGTATGAAATGGGATGAAAGAATGCTGGTATTCAGCTGAGGCATTTAAATAATGCTTTGGAAGTCCTGGCCTGCTTAGAACAGACTGCAATCTTAACTGTAAAACAGAAATTTCTGATGGTTTTGAGAGAAAAAAAGGTACTATAAAACCAAACTTTGCAGAGAATGGTGCCTATT .:......::..xxx::...x.....x:.............:..........:....:..:.....-.:...........:..................x..........:...::x..:..:...::.............x...........x:..........................:...........:.:.....x:.x.x.....x...........:...............:.............:.x..:..::.x....:........:..........:........:.............x..:....................:x...:.:......................:..x.......................:.................................................................................................................................................................................................:........:.:................x....x..........:.x.::.....x:.....x....x..::......:......x...-..:..x.x:.:.x::........xx.:.-.:...x:..-----x:..:...xx...:......:.:...:.......x.............................:.x..........................:.x.:x........x:.....::.xx..xx:....:..x...............x.....xx..:xx...::x..:..:...x..:x..x:x....x:...x..x.x.x..:......:x.:....:...:..x.::.:-----.x...xxx.......x...x.....x:::...:. 66M1I610M1I28M1I9M5D232M5I34M 819/979 83.7% 987/94230402 0.0% 13/979 1.3% 114158962 76055593 +102438 chr4 + 190214555 147036421 147036420 147037935 1515 TTGGGGCGGGCAGCAGAAGCCTTTGGTTTTGCCTGCTGGAAGATTACTGCTTCCTTGTGGTGGAGATACTGTGCTCTTCAGAGAGCCGGTAGT-GAGGCTGTCACTCTCCGCTGGGTTCAGAGGGGTTTTTTTGTTGTTGTTTTTTTTTTTTATTGTCCCTGTCAGTTAGCAGCCCAAGGTTACTGCCAGCTCTCTGTCAGGGCTTTGATTTTTGTCAGCTATGGCCAGGTCCTTTTAGTTATCTGCTATCTTTTCAGCTTTGTTCAGGCTCAGCTCTACTTGTCTACTAATTAGCTCTTTGGAGATTTCCCTTTTAAAACTCACTATCACAGAGGACAGGAACCGTTCAAAAGTTTTGTGCTTCATAGAAATTCCATATTCATCCATATCCCATACAGCCATATTTTTAAAATTAAAAGTGGCAGGTCAGGCCAATTTAAGGTATAGAAGTAACATTGTCTATAAAGAGAGACCTTCAGGTTCTTGATCAGGTATGGAGATGAGTGACAGGGAAGG--AAAAGGTTTACATCAAAAAACACTGAGGGGTACAAATTAAAAAGAAACGATCACTCTGTATAACATATTCACATTTTCTTTATCTTCTAGTGTGCAAATATTGTGCTAGCTGAATATAAAAGTAGCACAACTTTAGGGTACAAAAAAAAAAA---------CACACTGTAATAACATCAAGAGTGGTCTTACATCAAGGAGGGCCCTGAGGATGTCTTTGTTGTCAACTTCAGAAGAAAAGAGAGGAACAGAAGAGGAAACTGGCAGAAGGAATAGATGCCAAAGAGAACTCAAAGGATTAGGTCCGGGTGAGGTGATCGGTATTCGAAAACAGTCTGCCTTCTGGCTCTGATCTAAGGGAATAGGCTGGCAGCCAAGCCAGAGGGCATAGCAGCACAAACACACCTTCAGCACACTGCTAGAGGGTTGCCTCAGTGCCTTAGAAATTGCGCTAGCAATTAGAAATAAAGCTATGTAAGAGCAATAGGC-AAAATACTCTATTTATGGGTAAAACTCTGCTTTTTACATAAGTCCCATCCTGGTTGTCCCCTCCACATAAACATACCTTTTTCTTTTTTCTTATTGTAAGACCCCCTTCTTTTT--ATGCTAAGTGCATTTTTCTTCTGCTAACTTAGTGCAGTTGTAAGTTGCGCTTACATTGCATTTACACACTGTTAATGTCTGCAAGATGAAAGTAAAAACCTTTGAATATATTAATGTTATAACACAGATGTCTTACTTTT--TACTCTTTTTTTTAAAGCAAGTTGATGTGGCTAATAATGATGCAGATTGTGCTGGATGGATGTGCAGATGAAACAGGGGAATACAGATTAAATAAAAATTTCTTCAAAGCTTACGTTTGCTTCATAATTTAACTTCTGGGCTTGTCTCAGTGGTAGT----AGGTGCGACCAGCCATCATAACATTGTTCTAAAACATCTTGGCATCAGAGAGAAACAATCACCCAAATAACATTGCTGTACTTCTTCG---AAACCCAAGAAAAATAATCA chr4 + 94230402 32871748 32871747 32873240 32871748 32871747 32873240 1493 TTGGAATGGGAGGGAATTGTGCATGGTGCTGCCAGGCAGAAGATTATATCTTCTTTTTGGTGGAGGTTTCAGGCTCTTCAGAGAGCCTGTGGTTGTGGCTGTCACTCTCTGCCACACTCAGAGG--------------------CTTTTTTTATTGTCCCTGTCAGTTAGCAGCCCAAGGTTACTGCCAGCTCTCTGTCAGTGCTTTGATTTTTGTCAGCTATGGCCAGGTCCTTTTAGTTATCTGCTATCTTTTCAGCTTTGTTCAGCCTGAGCTCTACTTGTCTACTAATTAGCTCTTTGGAGATTTCCCTTTTAAAACTCACTATCACAGAGGACAGGAACCGTTCAAAAGTTTTGTGCTTCATAGAAATTCCATATTCATCCACATCCCATACAGCCATCTTTTTAAAATTAAAAGTGGCAGGTCAGGCCAATTTAAGGTATATAAGCAGCACAGCCTGTAAAAAGATACCTTTAGGTTCTTGATCAGGTATGTAGATGAATGACAGAAAAAGAAAAAAGGTTTCCACTGAAAGG-ACCAAGGTGTACAAATAAAAAAGAAACTATCATTCTGTGTAACATATTCTCATTTTCTTTATCTTCTGGTGTGCAAATATTGTGCTAGCTGAATATAAAAGTAGCACAACTTTAGGGTACAAAAAAAAAAAAAAAAAAACCACACTGTAACAACATCAAGAGTGGTCTTACATCAAGGAGGGCCCTGAGGATGTCTTTGTTGTCAACTTCAGAAGAAAAGAGAGGAACAGAAGAGGAAACTGGCAGAAGGAATAGATGCCAAAGAGAACTCAAAGGATTAGGTCCGGGTGAGGTGATCGGTATTCGAAAACAGTCTGCCTTCTGGCTCTGATCTAAGGGAATAGGCTGGCAGCAAAGCCAGAGGGCATAACAGCACAAACACACCTTCAGCACACTGCTGGAGGCTTGCCTCAGTGCCTTAAAAATTGTGGTAGCAATTAGAAATAAAGGTATATAGGAGCAATAGGCGAAAGTGTTCTATTTATGAATAAAAGTCCTCTTTTTACATAATACTCAGTCTACT-----------------CATATCtttttttttttttttctttt-----ttacttcttttttGCCACTTAGTACGTTTTTCTTGTGGTATCTCATCGATGCTGTAAGTTGCGCCTACATTGCACTTACACAGTGTTAATGCCTGGAAGATGAAAGTAAAAACCTTTGAATATATTAATGTTATAACACAGATGTCTTACTTTTTATACTCTTTTTTTAGAAATA---TGGTGTGGTTAATAATGATGCAGATTGTGCTGGATGGATGAGCAGATGAAACAGGGGAATACAGATTAAATAAAAATTTCTTCAAAGCTTACGTTTGCTTCATAATTTAACTTCTGTACTTGTCATGATAGCAGTAGTGAGGTGCAACCATGCATAATCACATTGTTCTAAAATATCCTGGTGAAACAGAACAAACCTAATCTAAACAGCACTGCCACACTTGTTCAGCTAACTGGAAGAAGAGTAATTA ....:::...x:.x.:xx.:x:x....x:....x.x::........:xx....:..x........:.x:::x...............x..:..-.x.............:..::x::.......--------------------:........................................................x..................................................................x..x...................................................................................................................:...............x...........................................x...:.:..:x.:..:....:...x.....:...................x......:......::..:.--.........x..:::...::-..::...x........x..........x....:.....:..........x.................:...............................................................---------..........:..........................................................................................................................................................................................................x...............:.............................:....x................:......:.x..................x...:..:...........-...:.::..........::.....x..:x............xx.:..x:..:x.-----------------....:......:......:..x..x.-----::x.........--x::..x...:.:........x..x..x..:.x:.xx.:............:.........:.......x........:...x..........................................................--............x:..::.---..:.....:...............................x...........................................................................x:......x:::.:.:...----......:....xx...x..x..............:...:...::xx.x...:x..xxx.x.:.:...:.:..:...:::....x...:---..x:xx.....:.:....:. 93M1I30M20D373M2I20M1D131M9I328M1I54M17D26M5D12M2I140M2I19M3D135M4I88M3I20M 1290/1469 87.8% 1493/94230402 0.0% 70/1469 4.8% 114164673 76049882 +32517 chr4 + 190214555 147044517 147044516 147045063 547 ATATGGTTGAATAGGA-ACCAGTGAAAACTATAATTAGAAATTACTGCAGATACAAAAAAAAA-----AAAAAAGCAACTTCT--GTGTCATAAAAGCAACGTGGGTTCTACCTGGTCCCTTTTGGGCTAAGTAAGTTGTTTGATCAGCTTCTCTCAGTCTCTGTGGATGTCCTTATATGAGTCTAATTGAAGGACTCCTGTTCTCTTTTTATTTTTGCTCTATGAAAAATGTATCAGAGATGTCTTATAATGAACTTTGATATGGTGAAATGATAATAATGTCCTAATTACATATAAAAATGTAATTACACTTGCTTCTATTATAGAAAAACTCCCTTTATAATGAAGTGTTATGTTGGAAAAAGAT-TTTCATTATAGGCGGACTCCTTTACTTGTTAATTTGAGCTCTGATTCATCGCTTTAATATT----AAAAAAGTTCTTTGTAAGTTACTTTTGATGTGTCTCATTTATGGTTCATTTCACTTCCTGGGAACCACAAGGAGCCCAAATC-CAAACTTCTTTGAAAGACACTTAAAAATACA----TCTTTCAAAAGGA chr4 + 94230402 32880832 32880831 32881378 32880832 32880831 32881378 547 ATGGAGTGGAATATGAGAAGGGTGAAAAGTATAATTA-------------ATACCAAGTAGGATGTGAAAAAGCACAACTTCCCCATGCCAGAGCAGTGATG-AGTTCCTACCTGGTCCCTTTTGGGCTAAGC----TGTTTGATCAGCTTCCCTCAGTCTCTGTGGATGTCCTTATACTAGTCTAATTGAAGGACCCCTGTTCTCTTTTTATTTTTGCTCTATGAAAAATGCATTGGAGATGTCTTATAATGAACTTTGATATGGTGAAATGATAATAATGTCCTAATTATATATAAAAATGTAATTACACTTGCTACTATTATAGAAAAACTCCCTTTATAATGAAGTGTTATGTTAGAAAAAAAGATTTCATTATAGGCAGATTCCTTTACTTGTTAATTTGGCCTGTGATTCATCGCtttaatattaaaaaaaaaaattCTCTCTAAGTTACTTTTGATGTTTCTCATTTATGGTTCATTTCTCTGCTCTGGCACCTTAAGATGCCAAAATTACAAACTTATTTAAGATATACTTTAAAATGTACTAGTTTTTAAAAACGA ..:x:..x.....x..-.xx:.......x........-------------....x..:x.::.-----....:x:.......:--:..:..x.:x..::.:.-:.x.:........................:----...............:.........................:x................:...................................:..::......................................................:.........................x........................................:......:.x-.............:..:...................:x..x....................----......:....:.x.................x....................x..x.::x..x...x:...:x...x....:-.......x...:.:.x.:....x.....::.----.:...x....x.. 16M1I20M13D13M5I15M2I17M1D30M4D231M1I61M4I82M1I31M4I13M 455/529 86.0% 547/94230402 0.0% 36/529 6.8% 114163685 76050870 +38063 chr4 + 190214555 147049882 147049881 147050474 593 ATTGTGGCAGTTTGAGTCCTAGACTTTGGAGAATTGCTGGAAGACATTTTAGCATCCAATTCATCGAGTAACTCATTAGGGTGATGAAAAGCC-CATGATGAAGGGGCAGTGCCATGTTTGAAGAGCCAGGGGTTCCTGTTATCCTGAATTATTAAGTAGTCAATATTCAGTGGCCGCTGCCTGCTCGCCTGTCTTCAGCAGGTGGTGGCCCTCTGCCTTTCTCT-GCAAAGCAGCTGCTTGCTCCCAGCCTCCCCAGAGCTTGCAACAGCCATTTGTTTCGATTTAAGACAGATGCGGTCATTATTTTGTGCAGAACTTCACAGAAATATTTCCTACTAAATGCTTGAACCATCTGAGTAGCACCAGGCAGGCTGCTGGCTTCATTAATAATGCATCCATGCTTATCAATAGGTTTAGACAACTGATATTTAGAAGCTTCTTTAGAAGGAGTGGGGTGGATGTTCCTTTCACACCAGTAGGCTTCATTTTGTCAGTTCCTTGATGTTGACATTACATCCAACTGTGTTCTGGAAACCAGAAGTGCTAAAGCTGTGTTGGGGCTGTTCTTTTGCTTTGGAGTGCTTCTTGATGGA chr4 + 94230402 32888166 32888165 32888748 32888166 32888165 32888748 583 ATTACAGCAGCTTGAGTCCCAGTCTTTGGGGAACGTCTGCAAGACACTTCAGTGTCAGATTCTTCAAGTACCTCATTAGGGTGATGAAAAGCCACATGATGAAGGGGCAGTGCCATGCTTGAAGAACTAGGGGTTCCTGCTGTCTTGAATTATTAACAAGTCAATATTTAGTGGACTGTTCCTGC----CTGCCTACAGCAGGTGGTACCCCACTGCCTTTCACTTGGAAAACATCTGCTTGCTCTGAGCCTCCCCAGAGCTTGCTACAGTCATTTGTT-CGATTTAAGACAGACACTGTCATTATTCCATGCAGCACTTCACAGAAATACTTCCTACTAAATGCTTGAACCATCTGAGCTGCACTAGGCAGGCTGCAGGCCTCATTAATAATGCATCCATGCTTATCAATAGATTCAGACAACTGGTATTTATAAGCTTCTTCAGAAGGAGTGG-------TTTCTTTTCACACCAGTTAGCTTCATCCTGCCAGCTCCTTGATGTAGACATTACATCCAACTGAGTTCTGAAAGGCAGAGGTGCTAAAATTGTATTTGAGCTGCTCCTTTGCTTTGGAGAATCACTTGACTGA ...:::....:........:..x......:...:xx...x......:..:..::..x:....x..:....x......................-.......................:.......:.:...........:.:..:...........xx..........:.....x.xx.x.....----...:..x...........:x...x.........x..-.x...:..x..........:x..................x....:........-..............::.x.........:::.....x..............:............................:x....:...........x...:...............................:..:.........:......x.........:...........-------x...:............x:.......::..:...:..........x.................x......:..:x....:........::...:..x.:....:..:............x:::x.....:x.. 93M1I91M4D36M1I53M1D175M7D133M 489/581 84.2% 583/94230402 0.0% 14/581 2.4% 114161716 76052839 +3026 chr4 + 190214555 147053778 147053777 147053821 44 AAAAGGAGACAAAAAACAACAACAACAACAACAACAAAAGAGAG chr4 + 94230402 61993795 61993794 61993838 61993795 61993794 61993838 44 AGAAAGAAAAAAAAGACGACAACAACAACAACAACAAAAAAAAG .:..:..:.x....:..:.....................:.:.. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 85059983 NA +24425 chr4 + 190214555 147056763 147056762 147057151 389 AAAAGAATCCAATAACATGAAACTATTTTAATAATTTTTAAAGGAAGTTTAAATGATACACACTTGATCAGGGTCGATGAAAATGGCACTAGTGTCGAAGGGCAACAGGTTGCTAATAAATACAATAGTTTAGGAAAGTGCTGTTTCTGTCATGGAAAAACTATATTCTGGGAAAAATAATACTACTGTAATTAATTTTTGAAAGCTATTGAGACTTCTTGGATGAAGAATGTAGTTATTAAAGGCAAA-GTACACAATATGTTGTAATGAAATGTTTGTGCTTCACACTTCATTAAATGTTTTGTGGGCCTCTGGGGAAATTCTATCTCTC-ACACACAGAAACAATGTTTATACATGGTGGTATCAGTAGAGGGAGTGCATAGAGCAAT chr4 + 94230402 32891056 32891055 32891444 32891056 32891055 32891444 389 aaaagaaaccaataaaataaagaTGGTTTAATAATTTTTAAGGAGATTTTAAATGATACTCACTTTATCAAGGCTGATGAAAATGACAGTAGTGTCAGAGGGTAACAGGTTGCTAATAAATACAATAGTTTAGGAAAGTGCTATTCTTGTCATGGAAAAA-TATATTTTGAGAAAAATAATACTACTGTAATTCATTTCTGAAAGCTACAGAGACTTCTCAGATGAGGAATGCAGTTATTAAAGGCAAAGGCACACAATATGTTGTAATGAAATGGTTGTACTACACACTTCATTAAACGCTTTGTGAGCCGTCTGGGAAATTCCAGCTCTCTCCTCTCAGAAAGCAGGTTT-TACGTGCCTGGATCGCTAGAGGGAGCACACGGAGCAAT .......x.......x..:..:x.:x...............:.::.x............x.....x....:..::..........:..x.......::....:.......................................:..::.............-......:..:......................x....:.........:x.........::.....:.....:................-.:.......................x....:..x..............:.:......:...x::x.........:.x.....-x.x.x......xx.x....-...:..x:x.x...:x.........::..::....... 160M1D88M1I82M1I19M1D38M 323/387 83.5% 389/94230402 0.0% 4/387 1.0% 114165707 76048848 +18746 chr4 + 190214555 147089007 147089006 147089512 506 AAGGGCAAT--TTCATGTTAAACATACACACAAGATGACAGGGAAGGGGGC-GAGCTGA--TAGCCCAAA-ATACATATGCAAACCCTCCCTTGGAAGCTTGCTTTTCACTCTCTTGTACAAAGTCAATGGAAACCAAGGAACTACCATTCCAGAAT----TGTCGCCTGCTTTAATCCTTAATAACCAAATAAAAA-TGGGCAGCCCGTATTCGGGAGCAGCTCTAGCAAGCAGACCTCTAGGAAACAAGGCTCCCTGCAGACTTTCCCTTGATCTTAAAGCTTAACTTGAAACATTTATATGCACGGAGCACCTGGCCAGGAGATGTGAGAAGGCCTTTTTTTTTTTTTCTTTTTTTCACCTTGGCTCCATTTCTTTCTTTAATAATAAATTCTCAGTTTTCTTTTTTCCCTTCTTGGAAACTGATTCCACTCTAAATAATGT---------TTTTTGTTCTT----TCTTAATAGTTTAAGAAAAGCAAGACAAACTTGAAAACCCCCCATTAACATCCATCAGGCT chr4 + 94230402 32901164 32901163 32901664 32901164 32901163 32901664 501 AAAGGTGATCCTTTAAATTAAGCATGTATAAAGGA--GCAGTGATAGTGGCAGAGCTGAATTAGGCTAAGTATCCACATGAA------CCTATGGAAATGCATGTTTCATAGCTGTGGACAAAGATAATGGCATGCAAGGAACTGCTATTCCAGAAAATGATGTAGCCT---TTCATCCTTAATAACCAAATAAAAAATGGGAAGTCAGTACTTGGGAGCTACTCTTGCAAGCAGATCCCCAGGAAACAAGGTTCCCTACAGACTTGTCCTTGATCTTAAAGCTTAACGTGAAACATTTATATGCACGTAGAACCTGGCCAGAAGACGTGGGAAGGC--------------ACTTTTATCACACTGGCTGTATTTCTTTCTTAAATAATAGATTTCCTCTTCCTCCCACCCCCCTTCTGGAAATGGAATACATGCTCAATAATGTTTCTGTGCCtttttatttttattattttaataCTTTAAGAACAAGCAGACAGTTTTGAAAG----CTGTTAATACCCCTCAAACT ..:..::..--..:.x:....:...::.:.x.:..--:...x..x:.x...-.......--...x.:..:-..x..:...x.------..:x.....::x:::x.....:xx::x..x......x:.....x.xx.........:.:.........x----...x....---..x......................-....x..:.x...:.:......x:....x.........:.:.:...........:.....:.......x:....................x...................x..x..........:...:...:......--------------x:....x....x:.....x:...........x.......:...::.xx..::::::x::...:.::......:x..x.x..:x..x........---------.....:..:..----.:......x........x.:xx.....:x:......:----.::....:.:..x...::.. 9M2I24M2D14M1I7M2I9M1I11M6D69M4I8M3D25M1I139M14D94M9I11M4I37M4D20M 356/477 74.6% 501/94230402 0.0% 53/477 11.1% 114187843 76026712 +3721 chr4 + 190214555 147095272 147095271 147095381 110 TATATATCTGTATATGTGTGTACATACGTGTATATGTGTGTATATACGTGTATATACACACATATACACGTATATATGTATATATACGTGTATATACACACATATACACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:..x...:.x.x....x:.:..:x.:...:.::x:::......x:..:..:x:.:..:...::..x:..::x.x.:.:....:......:x.:.::...::..... 110M 66/110 60.0% 110/94230402 0.0% 0/110 0.0% 125986078 64228477 +3062 chr4 + 190214555 147095363 147095362 147095411 49 ATATACACACATATACACGTATATACACACATATACACGTATATATATA chr4 + 94230402 74526074 74526073 74526122 74526074 74526073 74526122 49 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTA ..x:.......:.:...:.x.:.......x.....:..........:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 72569289 NA +3665 chr4 + 190214555 147095394 147095393 147095500 107 TATACACGTATATATATACGTG------TATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACGTATATATATACGTGTATATATACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACG----TATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......:..:.:.x.x.::.x.------.....:...x.........x...:..:x......----...:...x..:::x.x:::......:.:..:.x:...::..:..... 22M6I34M4D47M 71/103 68.9% 109/94230402 0.0% 10/103 9.7% 125986200 64228355 +3665 chr4 + 190214555 147095430 147095429 147095536 107 TATACACGTATATATATACGTG------TATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACGTATATATATACGTGTATATATACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACG----TATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ......:..:.:.x.x.::.x.------.....:...x.........x...:..:x......----...:...x..:::x.x:::......:.:..:.x:...::..:..... 22M6I34M4D47M 71/103 68.9% 109/94230402 0.0% 10/103 9.7% 125986236 64228319 +3394 chr4 + 190214555 147095466 147095465 147095585 120 TATACACGTATATATATACGTG------TATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACATATACACGTATATATACGTGTATATACACACATATACACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACG----------------TATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ......:..:.:.x.x.::.x.------.....:...x.........x...:..:x......----------------...::..x:..:.x:x.:.:....:......:x.:.::...::..... 22M6I34M16D48M 72/104 69.2% 110/94230402 0.0% 22/104 21.2% 125986272 64228283 +3081 chr4 + 190214555 147095553 147095552 147095618 66 GTATATATACGTGTATATACACACATATACACGTATATATACGTGTATATACACACATATACACAT chr4 + 94230402 85834550 85834549 85834615 85834550 85834549 85834615 66 GTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:.:.:.::......xx.:::.x::.....::.:..x....:...x...:........:...... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 61261003 NA +3122 chr4 + 190214555 147095576 147095575 147095654 79 CATATACACGTATATATACGTGTATATACACACATATACACATATGTATATATACGTGTATATACACACATATACACAT chr4 + 94230402 85834537 85834536 85834615 85834537 85834536 85834615 79 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.::::x.:.:.:.::....:.:..:xx.::..x:..:.:..:.:..x....:...x...:........:...... 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% 61261039 NA +3018 chr4 + 190214555 147095663 147095662 147095726 64 ATACGTGTATATACACACATACACATGTGTGTACATACACACAAGTGTATGTACACACATACAC chr4 + 94230402 87216411 87216410 87216474 87216411 87216410 87216474 64 ATGTGTGCTTATGCAGGCAGACACACGTGAGTACATACAGACAGATGTGTCTGCACGTATAAAC ..::...:x...:..x:..x.....:...x.........x...::...:.x.:...::...x.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 59879252 NA +4640 chr4 + 190214555 147095704 147095703 147095813 110 CAAGTGTATGTACACACATACACACGTGTACATACACACAAG--------------TGTATGTACACACATACACACGTGTGTACATACACACAAGTGCATGCACACACATACACACGTGTGTA chr4 + 94230402 68837026 68837025 68837149 68837026 68837025 68837149 124 CATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA ..x......:....:.......:..x.::...:....:....--------------.x:xx...x:x..:.:::.::......:::.........:.:...:..:......:.....:.x.x.. 42M14I68M 77/110 70.0% 124/94230402 0.0% 14/110 12.7% 78258678 NA +4494 chr4 + 190214555 147095726 147095725 147095854 129 CACGTGTACATACACACAAGTGTATGTACACACATACACACGTGTGTACATACACACAAGTGCATGCACACACATACACACGTGTGTACATACACACAAGTGCATGCACACACATACACACGTGTGTGT chr4 + 94230402 68837026 68837025 68837150 68837026 68837025 68837150 125 CATGTGtatatacataca----tacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ..:.....:.....:...----..::...x:...:.......::x.xx..x:x.xx:....x.xx.:.x:x..:.:::.::......:::.........:.:...:..:......:.....:.x.x.:. 18M4D107M 81/125 64.8% 125/94230402 0.0% 4/125 3.2% 78258700 NA +4047 chr4 + 190214555 147095766 147095765 147095895 130 CGTGTGTACATACACACAAGTGCATGCACACACATACACACGTGTGTACATACACACAAGTGCATGCACACACATACACACGTGTGTGTACATACACACAAGTGCATGCACACACATATACACATATATA chr4 + 94230402 68837026 68837025 68837149 68837026 68837025 68837149 124 CATGTGtatatacataca----tacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTG--TACACACAAATACATACATACACATGCACACATTTTTA .:......:.....:...----:.:::..x:...:.......::x.xx..x:x.xx:....x.xx.:.x:x..:.:::.::........:--.........:.:...:..:......::......x.x.. 18M4D68M2D38M 81/124 65.3% 124/94230402 0.0% 6/124 4.8% 78258740 NA +3146 chr4 + 190214555 147102558 147102557 147102653 96 ACACTCTATCTCAAAAAAAAAAAAAGAAAAAGAAAAAAAGAAAAAAAAAGAAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAGGAAAGAAA chr4 + 94230402 42662986 42662985 42663081 42662986 42662985 42663081 96 ATATTTAGTATCAGAAAATATAGGGATAAAAGAAAAAAGCAAAAAAAAAAAGAATCAACAGAAAGAATGTAAACAAAGAACTTGAGAGTAGATAAA .:.:.:x:.x...:....x.x.::::x...........:x.........:.:..xx..x........x.x...x...::.xxx:.:..x.:.x... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 104439572 85774983 +3004 chr4 + 190214555 147102578 147102577 147102645 68 AAAAAGAAAAAGAAAAAAAGAAAAAAAAAGAAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAG chr4 + 94230402 84600583 84600582 84600650 84600583 84600582 84600650 68 AGGAAGAAAAATGAAACAAGGAAAAGGAGTGCAAGAACAAGCAAGGGGGAAAGGAAATGAGAGGGAAG .::........x:...x...:....::.:x:x.....x...x...:::....:....x..:..::... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 62501995 NA +3049 chr4 + 190214555 147116017 147116016 147116075 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71082811 NA +13264 chr4 + 190214555 147129678 147129677 147129949 272 TTATTTTCAAAATGTCAAAAAAGGAATTACTTTTTTCTTCTTGCCTGTT---------ATTTTTCCAGTTCTTTTTAAAACAAAGTGTTCATTTTGGGGCATGACAGCTAAAATAGAAATGTCTTTGGCATAAACTCAGCTCTCCTAGCCTGCAGGCAAAATATAAAATTGTTAAATTGGAGAGGACCAGAAAGCGGATGATAAAATTTGTCCATGGAACTTCTGTTAATAACAAACATTTGTCCCATGACATGTACTATAAGTAATAACACATGACAGGG chr4 + 94230402 32918578 32918577 32918854 32918578 32918577 32918854 277 TTTTTTTTTAAATGTTAAATAA---ATTACATTTTCCTTTTCACATTTTTATCAGAACATGTTTAAAATAAGATTTAAAATAAAATGTTCATTTTGGACGATGACAGCTGAAATAGAAACGTCTCTGACAGAAACTTGACTTTC-TAGCCTGTGGGCAAAATATGAAATTGTTAAATTGGAATGGACCAGACAATGGATGGTAAAACTCATCTGTGAAACTTCTGCTAATGACTAACATCCATCATGTGACACGTATTTTAAGTAACAGTGTATGACAAGG ..x....:x......:...x..---.....x....:...:.::.x.x..---------..x...xx.:.xxxx.......:...:............:xx.........:.........:....:..:..x.....:::..:..-.......::..........:................:x........x.::.....:.....:.::..::..:........:....:..x.....:::..x::.....:...:.x.......:.::::......:.. 22M3D24M9I86M1D136M 201/268 75.0% 277/94230402 0.0% 13/268 4.9% 114211100 76003455 +8660 chr4 + 190214555 147136436 147136435 147136754 319 CAATTTTTGAGCCAGAATAATTTAAGCACTAGGGTCTTGTCGGGTTTTGCAACCATGAACAGCCTTACAAAGTCTAGGCGTTTTGCCAGAAATCTA-AACTTTGTTGAACTATGTTAAAAGGTTAAGCGTTTCACAGAGTTTGGCCTCCCCCACCCCCACCACACTCCCTGCCTCTGCCTTGTTGGTAAATGTCTGCTTTATCAAGAAATGGAATAA-CTAATAATGTGCTGGATAGAAC-ATTTTCAACCATCACACTGTAACCATAGTAGTGCTAAAAACCCCAAACAAATGTTATTCACA---CTTCTCTCCTTAATCAAAA chr4 + 94230402 32920882 32920881 32921183 32920882 32920881 32921183 302 CAATTTCTGTCTCAAGCCA---TAAACACTGTGATCTTTGGGGGCTTACAAAGCACAAGTAGCCTTAAAAAATCTGGGCAATGTGCCAAAAATTTTTAGCTTTGTTGAACTGTGGTGGAAGGTTAAGCATTTCACACAGTTTTGTTTCTCCCTTCC----------CCCAGC--TTGTCTTGCACTTAAAGG---GCTCTGTCAAGAAAAGAAGCAAGTTCATAACGGGACGGATGGAACAATTTCCAGCCATTTCAGTA-----ATGATTTTGCTGGAAATCTGAAACAAATGCTAACCTCAATCTTTCTCTGCTTAAAAGAAA ......:..xx:..::x:.---...:....:x.:....xxx...:..xxx..x..::.::.......x...:...:...:x.x.....:....:.x-.:............:..x.::..........:.......x.....x.::..:...x:..----------...x..--:..:....:xxx....x.---...:.:........x.:.::..-:.x....:.x.x:....:....-....:..:....:x..x.:-----..::.xx....::...:.:x.........:..x:.x..---:......x.....xx:... 19M3D74M1I59M10D6M2D18M3D22M1I22M1I19M5D38M3I19M 205/296 69.3% 302/94230402 0.0% 29/296 9.8% 114215554 75999001 +3367 chr4 + 190214555 147154921 147154920 147155022 102 AAGATTCCATCTCATAAAAAAAAAATATATATATATATATATATATATATATACACGTACATATATATACATATATATGTGTATATACATATATATACATAT chr4 + 94230402 41743155 41743154 41743252 41743155 41743154 41743252 98 AAGGTTCCACCTTTTTAAAAACTACTGCACATGTATTT---TA-ATTTATATACACATACATCTGTATTTATATATATGTGCATTTAAAAAATGATACAAAT ...:.....:..:x.x.....xx.x.::.:..:...x.---..-..x.........:.....x.:...x:...........:..x..x.x.xxx.....x.. 38M3D2M1D58M 71/98 72.4% 98/94230402 0.0% 4/98 4.1% 105411766 84802789 +3102 chr4 + 190214555 147154977 147154976 147155053 77 GTACATATAT-ATACATATATATGTGTATATACATATATATACATATATATGTATATACATATATATACACATATATA chr4 + 94230402 46063288 46063287 46063365 46063288 46063287 46063365 78 GCACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .:....x..:-......:.:..::...:...:x::.:..:.x...:...:.x.............:xxx.:.....:. 10M1I67M 53/77 68.8% 78/94230402 0.0% 1/77 1.3% 101091689 89122866 +3526 chr4 + 190214555 147174483 147174482 147174529 47 AACAACAATCAACCAACCAACCAAACAAACAAAAAAAAACTTTCCAA chr4 + 94230402 57454526 57454525 57454572 57454526 57454525 57454572 47 AACAAAAATCAACCAACCAACCAAACAAACAAACAAAAACCCACCAA .....x...........................x......::x.... 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 89719957 NA +3105 chr4 + 190214555 147201879 147201878 147201977 99 CCTGTAGGAAAAGAAAAGATGAAAAAAGGGAGCAGAGAAAGTACAAAAGGAATTACTAAAGAAACATCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59382574 59382573 59382672 59382574 59382573 59382672 99 CCCTCAGGAAAATAGAGACAGGAACAAAAGAAAAAAGGAAAAACAAAATAAGCAAACAGAATTAAATTTCTGTTCTTTTTTCTTTTTTTTTTTTCCTTT ..:x:.......x.:.::xx.:..x..::..:x.:..:..:x......x:.::x.x:.:.:xx.x..:::.x..:......:............::... 99M 60/99 60.6% 99/94230402 0.0% 0/99 0.0% 87819305 NA +3191 chr4 + 190214555 147231197 147231196 147231263 67 AGGCTTTGTCTCCCTGTCTCCCTCTTCCCTTCACTCTTTCCCCCACCACCCCTCCTCCTCTCTCTCC chr4 + 94230402 46413383 46413382 46413449 46413383 46413382 46413449 67 AAGCTTTTTTTTTTCTCCCCCCCCCCCCCCCCACTATTCCCCCCACCACCCTTTTCCTTCTCTGTCC .:.....x.:.::::x:.:...:.::...::....x..:............:.:::.:.....x... 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 100817814 89396741 +21684 chr4 + 190214555 147236414 147236413 147236952 539 TTTATCTGAAATTTCTACAACAAATGACCACCTTAAAAGTTCTCAAAAATACCGAAAAGTACTGAAAATTTTTTGTT----GGTTTTTTTCCTCTCCCTTTTGCAACACAATGAGGGAA--TGAAGCATTTTTCTTGGACACTGAGTATAATTATAACTAATCATCTCCTTCT----CCTTGGAGCAACATTCGTTGACGTTCCTTCATTTTAGGGTGGCTGGCTGACACAATTCAAATATAATTACTCTTCTTGCATGATAAACTCCAGCACCGTGAGCAAATACGGTATGTCTCATTGTCAGGTATGGCTAGACAGCAGCGGTGTAATATAGACCTTTCAAGCCCTGGTGTAGCCCCCTGCCTTTGAAATCTGTGTGAGATGACAAAACTGACTTTCATTTCCCTTGGACTTTCTCAAGGTATCCTTATTAAGAAAAAAAAAAAAAAAGCCT--------AAAACCCATAAATTTAATCTACTGCCTGCCAATCACAATGGTTTCTGCTGTCAGACATTCATGATACATAACCACAAAATTTAAATGTTATTGTT chr4 + 94230402 32958808 32958807 32959344 32958808 32958807 32959344 537 TTTCTCTCCAATTTCCATAAGGAATTATGAACTCAAGAAATTTTAAACATTGCGAAAGGTA-TGGAATTATTTTGTTTAAGGTTTCTTTTTCTCTC---TTTGTAACAGAGTCAAGGAGAGCGAAACATTTCTCTTGGACACTTAGTAGAATTACAACTA-CCATTTCCTTCTTTCTCCTCAGAACAACACACATTGAATTCTCTTCATTTTAAGGTAGTTGGCTGACACAATTCAAATTTAATTACTCTTTCTGCATGATAAGCTCCAGTCTTGTGAGCAAA-----TATGTCTTGTTTTCAAGTTTGGCTAGACAGCAGCAGAGTAATAAAGACCTTTCAACCCCTGGTGCAGCGTGTAGATTTTGAATCTTTTCCTAAATGACAAAAACAGCCTTTTCTATCACAGAACTTTCTCTTAACATCATTATT----------AAACAGACACCTAATCCGTAAAAACCTACAAACCTAATCAACTGGCTGCCAATTATAATGACTTCTGCTGTCAGAACAGCATGATGTGAAACCCCAGCAAGTAAATGGCAATGTT ...x...xx......:.:..x:...x.:x.x..:..:.:x.:.:...x..xx.....:...-..:..x.x.......----.x..:....:.....---....:....x.:.x.:...:--:...:.....:...........x....x.....:.....-:...:.......----...::..:.....:x.:....xx.::..........:...:.:...................x...........::..........:......:x::.........-----.......::..x...:..x...............:.x......x...........x........:...x:x:x.x:......x::.x.x:x.:.........x:::.:..:x:.x:.x:x.:........xx:::...x.....----------...x.:.x:...--------......:.:...::.....x....x........:.:....::.............xxxx......:::x....x..:x.xx......x:.x.... 61M1D15M4I15M3D20M2I39M1D12M4I106M5D144M10D12M8I95M 382/519 73.6% 537/94230402 0.0% 38/519 7.3% 114277606 75936949 +19435 chr4 + 190214555 147239143 147239142 147239725 583 TTGCGTATTTAAA-TATGCATCAGCTCAGAAGAAGTTACACAATG-TTTCCATCAGCAGAAGATATGGCACTTAGAGAAAGCATCAGGAAAATAAAAACTACAGACAAAATAGGGTGTATTTGCATATTTCACTTGAAATTAGGCTATGTTGCAGCACATTGGAAACTCATATGCATTGGATGTCAGCTGAGTTACTTTTCTTTCCCCCCAAGGTGACATTGGTGCTTGTCTTACCAAATATGATGCAACTGACAAGTGTTTTCATGTAAGGAAGATATATGCCTCCCATCACCTTGTCAAGCTGAGTGAAGGCAAACTCCAGCACA-TCCTTTCACAAGTGATTAGGTGGTC-GGAGTCATTAAAAGTCATAAAGTTAGACTGCAGCAGTGTGCCATGCATA-TATATGAACTCATCCAAAGCTGTCCTCCTTGAAGCAGGTGATAGCTCTCAACTTT-GCCTCTGA----------------CCGACTCA---------TAAATTCTTGACTGAGCTTTCTTTCTCTTAGCATATCTTTGAAATTATACTG----AACAGTAAATGCTGCTTTGGCCAGTCTCATTGTCTCCTGCATTCCCAGCCAAGCCTCTAAC chr4 + 94230402 32960938 32960937 32961513 32960938 32960937 32961513 576 TTGATTATTTAAACTGGGCACCA----AGAAGAAACTGCACATTGCTTTTTATCAGTC-AAGATACAGCT----GAGAGAGCACCACAGAAATAAA-------GGCAAAAGAGAGCATATTTGCATACAGCACATGAAATTAAGCCCTTTTGCA----ATGGTATACCCACACACTTTAAACGTCAGCTGAGTTACATT--------CTGAGGGTGGCATCGCTGCTTGTCTTGCCAAATCTGATACAACTGACAAGTATTATCATGTAAGAGAGATA------TCCCATCACTTTGTCAAGCTGAATGAAGGCAAACTCCAGTGTATTCCTTCCTCCAGTGACAAAGTGGTCTTGAGTCATTAGAAGTTGTACAG--ACACAGTAGCAATGCACCGTGCATGCCAGATGAACTCAGCCAAAGCTGTCCTTCTAGAGGCTGGTGAAGGCCCTAGATTCCAGCCCCTGAAGCTCCCAGTTAGATCCAGTCCCAGAGCATGGTTACACTCTGGAC------TTGTTTGTTTTAAAATATATCTCCAACTTTTTCATTACAACTGTAAATACCACTTTGGCCAGTCTCACTGCTTTCTTTCTCGTTAGAAAAACATCTAAC ...xx........-.:x...:..----.......::.:....x..-...::.....:x-......::..x----....:....:..x::.......-------.:.....x..:.::..........:xx...x........:..:x.x.....----..x.x.x..:..:.::.x..::.:..............x..--------.:x.:....:...:.x..........:......x....:............:..x.........::.....------.........:............:................:::.-.....:.x.x.....:x.:......-x.........:....::..x..--.x..x.:....:..::..:.....:-:.x.........x.............:..x..:..x.....x:..:..x:.:.::-...:....----------------.x.x.:..---------..x.:...x...------..x...x.:...:x....x.:.xx..:.x.x:::----...x......:.::...............:..::.:..x:x.:x::..xx..:.x...... 13M1I9M4D18M1I12M1D11M4D22M7D51M4D41M8D71M6D43M1I25M1I22M2D25M1I55M1I8M16I8M9I12M6D34M4I61M 402/541 74.3% 576/94230402 0.0% 77/541 14.2% 114278205 75936350 +3092 chr4 + 190214555 147263523 147263522 147263589 67 ATATGTATATAAGATTTACACTTATTTATATATACACACGTATACATATGTGTGTATGTATACATTA chr4 + 94230402 43617753 43617752 43617819 43617753 43617752 43617819 67 ATATGTATATGGGGTATACACTTGCTTATACAGACATCTCTATATATGTATGTATTAAAATACATTA ..........::.:.x.......::.....:.x...:x:x....:..:.:...:.xx:x........ 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 103645770 86568785 +3189 chr4 + 190214555 147298617 147298616 147298663 47 AAAAAAAAAGAAAAAAATGAACAAGTAAAAGAAAACTAATAAAAACT chr4 + 94230402 6134030 6134029 6134076 6134030 6134029 6134076 47 AAAAAAAAGGAAGAAAAGGAACAAGAAAAAGAAAGCCAACAAAAGCT ........:...:....x.......x........:.:..:....:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 141164587 49049968 +11685 chr4 + 190214555 147318279 147318278 147318760 482 TTCCAAAGGAGAATTTTCTACCTAATCATCTTGCACTTCACTTACTCTTTCCAGAATTTGATTTTAC--GAATGTGACTGATCTAAAACTTTATACT----GATACCAATAGCTTTATTATTTAACAATTCTTGGACAACTAGC-TTTTTAATTTATACATTTTCTGGCAGAGACCT----------------GAAACCAGATTATTTAATAATAAAATATAAGCTTTGAAACCCCTCCAAATCCTTTACTTTTAGGTATAAGACCAACAATAAAAAATGTCTAGCTAAATATTGTATGAATGAAGGGATGATCTCTTTCACCGTACTGAGTTTCAATCCCCATTTGAATCCT------------CAGCCTTAGGCAAGTTCACCTTTGTAGATGAATGAATGTCTCGAAAAAAAGAAAATAATAGGGTTGTTCTTCATGAAAGATA------AAGCCTGTTTCTACCCCATACTCTCTTTGTAGATTCCCTTAG---GAAGAAATCTAGTGAAAGCTAAACTGGA chr4 + 94230402 32985710 32985709 32986215 32985710 32985709 32986215 506 TCCTGAAAGAAAA----CTAGTAAATCATCTT---TTTCACAC-CTTTTCCCAGCAGTTTGTGATAATAAAATATGAGTGATTCAAACCCTAACACTTACAGGCACCAACAGCTTAATTATTTAACAGTTCTTGGACTGCTGATGTTTCCAGCCTGTGGAA---CCAGTGCAGACCTAGGGAGTTCTGTTACAGAAAACAGATTATTAAATAATGAAATACAGCCTTTCAAAAGCCTCTGAGATGTTTACCTTTAGGAATAAGACCAGCATTAAGAGATTTCTAATAAAATATTGAATGAATTAAGGGACTTCTTTTCTCTGTATGCAGAGGTT------ACATTTAAATCCCTTCGCTGTGTAGCAGCCTTAGGCAACACAACCTGACTTCATGTCCTGTTGCCTTGAAAAACATGAAGAAGTCAGGTTTTTCCACATGAAAGGCAGGCAGGACTCTTCCTTCTACTCTATTCTTGTTCTGTAGGCTCCCTAAGTGAGTAGGGCTGTAGTGA---TTGAACTGAA .:.::..:..:..----...x:x.........---:.....x:-..:..:....x.x..x:.xx..x--:...:...x....::...x.:.x.:...----.::.....:.....x...........:.........x:..:::-...::.:::.:.:x.x---.::.::x......----------------....x.........x......:.....:.:x....x...xx....::.:x:x.....:......x.........:..x...:.:..x....::x........x......x......:xx::.:.:..xx::.:.x...x..------x.....:.....:------------.............xx:x....xxx.xx...xx:x:x..:..:......x.x:..:x.:.x:....x...:x........::.------.xx.:.x:......:.:..x..:x:.:.....::.....x..---.x..::x.x......---:.:.....:. 13M4D15M3D8M1D23M2I28M4I43M1I16M3D13M16I141M6D13M12I82M6I42M3I15M3D10M 312/462 67.5% 506/94230402 0.0% 64/462 13.9% 114332569 75881986 +9134 chr4 + 190214555 147326707 147326706 147326942 236 ACTATAAACCTAAGTAAAGCTGATTCCCAGATCCAATGGATATTAAGCTAACA-CTCTGCCAAGAAAAACATTTCTCCTTCACTGCCCTGAGTAAGAGTCCTTCCTATGTCCATGGGAGGAAGTCATTTGCCAGATGTTGCTGTTTATTTTATAAGTCTCTCTTTGACTTGTGCTTATTTTCTCTTGACCTTCCCAGCTTCTCCCATA-----TTG----AGAAAAAT-----CAAGAACTCTGCAAACCA chr4 + 94230402 32993306 32993305 32993549 32993306 32993305 32993549 244 ATTATAAGTCT--GTATGACTCTTTCCCAGA-CTGATGGACTTAAAGCCAATAACCCTGCCAAGAAAAACATTTCACATCCACTGCAGTAAACAAGAGCTTGACAAATGT----AGAACTAAGTCATTTACCAGATGTTACTATTTGTCTTACAAATCTGTCTTTGACTTTTTCTTATTTTCTCTTGACCTTGTAGGCTTCTCCCATACACACTTGATGCAAAAAAACAAATGCAAAACCTTTGAAAGCCA .:.....::..--...x::..xx........-.::.....:x.x....:..:.-.:...................x.x.:......xx.:.::.....:::xx.xx....----:.:.xx.........:.........:..:...:.:...:..:...x..........x.x...................x:x:............-----...----.:.....:-----...:.x..:..x..:... 11M2D18M1D21M1I56M4D94M5I3M4I8M5I18M 173/229 75.5% 244/94230402 0.0% 22/229 9.6% 114333401 75881154 +3505 chr4 + 190214555 147330537 147330536 147330581 45 CCTCCGTCTCTCTCTCTCTCTGTCACACACACACACACACACAGA chr4 + 94230402 75248048 75248047 75248092 75248048 75248047 75248092 45 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagaga ...:.x...............x...................x... 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 72082489 NA +3068 chr4 + 190214555 147330543 147330542 147330580 38 TCTCTCTCTCTCTCTGTCACACACACACACACACACAG chr4 + 94230402 12601305 12601304 12601342 12601305 12601304 12601342 38 TCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG ...............x........:..........x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 134729238 55485317 +3764 chr4 + 190214555 147339698 147339697 147339771 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAACCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.xx.x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 71306494 NA +3788 chr4 + 190214555 147350170 147350169 147350296 127 AGGGAGGAAAGTAAAGAAGAAGTAAGGAGAGAAGAAGGAAAGAAGGGAGAGAAGGAGAAAAAGGAGAGAAGGAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAG----GGAGGAAGGAGAAAGAGAAAGAAG chr4 + 94230402 49044692 49044691 49044821 49044692 49044691 49044821 130 AGAAAGACAAGTAGTGA-GAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG ..::..:x.....:x..-....:.xx:..x..::....:....:xx:.:::...:.....::x..:.:.x.:...:..:.......x....x:::::.xx...----...:..:...:..x...x..x... 17M1D85M4I24M 80/126 63.5% 130/94230402 0.0% 5/126 4.0% 98305478 91909077 +4221 chr4 + 190214555 147350220 147350219 147350427 208 GAAGGAGAAAAAGGAGAGAAGGAAGGAAGGAAAGAAGGA--AGGGAGGG--AGGGAGGGA------GGAAGGAGAAAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAACAAAGAAACAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGATGGAGGGAGGGAGGAAGGAAGG-----AGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAAGA chr4 + 94230402 65771126 65771125 65771340 65771126 65771125 65771340 215 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAA-AATCAGAG-------GAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ...::..:x.:....:x:::.x..:x..:..x....:x.--...x....--..x:..::.------:....:xx:.:..:...:.::...x:..:..:.....::x.....-..x..:..-------.......::.xx...:x:....x.:.x.xxx...x.:......:..:x...x....-----......x..x.:x....xx..x.:...:....x.. 39M2I8M2I9M6I45M1D8M7D56M5I35M 130/200 65.0% 215/94230402 0.0% 23/200 11.5% 81579094 NA +3046 chr4 + 190214555 147350235 147350234 147350323 89 GAGAAG-GAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAGAAAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAACAAAGAA chr4 + 94230402 11181414 11181413 11181503 11181414 11181413 11181503 90 GAGAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAA ......-.xx.:.:..:.x.:..::.....x.x.x...x:....x:...:.x:x.....:.:::...:..:..x.........x..x:.. 6M1I83M 59/89 66.3% 90/94230402 0.0% 1/89 1.1% 136168821 54045734 +3589 chr4 + 190214555 147350266 147350265 147350425 160 GAGGGAGGGAGGAAGGAGAAAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAACAAAGAAACAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGATGGAGGGAGGGAGGAAGGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAA chr4 + 94230402 56107290 56107289 56107445 56107290 56107289 56107445 156 GAGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTA-TGGAGGAGAACAGTGAGGAGAAAATGGGAATAGA---GTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAA ......:.:.x.x..x:....:.:::..x.....:...:.x.x:x:::.....x..x.:x.:..x.-:::..:.::.x..x:.:..:....x:.:..x:..---:.:.:xx..x.:.xx.x.::x.x....:x.:...:........x.:.....:.:.. 66M1D34M3D56M 92/156 59.0% 156/94230402 0.0% 4/156 2.6% 91242976 NA +4002 chr4 + 190214555 147350340 147350339 147350483 144 AGAAAGAAAAGAAAAAAAAGAAAGGGATGGATGGAGGGA--------------------GGGAGGAAGGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAA chr4 + 94230402 49044660 49044659 49044820 49044660 49044659 49044820 161 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGA---AAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .:.:.........x..:.::xx....:...x.:..::..--------------------.x...:....:.:...xx.:.:......:.:.::x:.:...x:...::..........x...::.:.---...xx:...xx..:....::....xx:..x..x.. 39M20I67M3D35M 92/141 65.2% 161/94230402 0.0% 23/141 16.3% 98305680 91908875 +3220 chr4 + 190214555 147350378 147350377 147350445 68 AGGGAGGAAGGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAA------GAAAGAAAGAAGGAAATAAA chr4 + 94230402 15856696 15856695 15856769 15856696 15856695 15856769 74 AGGAATCAAGACATGATAAAGAAAAAGAAAAGAAAGAAAAACGAGACAGCACTGGAGGGAAAGAAGAAAAGAAA ...:.xx...:x.x..x.....................:..x..:.x.------..::........:...x... 48M6I20M 53/68 77.9% 74/94230402 0.0% 6/68 8.8% 131493682 58720873 +3288 chr4 + 190214555 147350401 147350400 147350506 106 AAAGAAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGA chr4 + 94230402 86730455 86730454 86730560 86730455 86730454 86730560 106 AAAGAAAAAAAAGGAGGCAGGTTAAGAGCAAATGAAGAAAAGGAGAGCAAAGGAGAAAAAGCAGGAAACATATCTTGCAATATACTAAAGAATGCAAAGTAAGGGA ........:....:..:x..:xx....:x:..x....:...x:.:::x....:.::.....x.:....x.x.:xxx.x..x.x.xx......x:x....x...... 106M 68/106 64.2% 106/94230402 0.0% 0/106 0.0% 60619946 NA +10047 chr4 + 190214555 147350404 147350403 147350717 314 GAAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAG-AAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGAAAGGAGAAAGAA-AAAGAAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGA chr4 + 94230402 39943707 39943706 39943996 39943707 39943706 39943996 290 GGAAAAGCAGAGGATATCATAGGAAAGTAAGAATGGAGGGATGAGAGgaagagaaaagggagggaggaaatggaggaggagagaaaag----------------------ggggaagagagaagagaaaacaaagagtaggaagagcgaaaagacagaagagggaattgaggaaaaaaaagaaaggagaataagcaa---agagggaagggagagaa-gaaagaggagaagaaagaataagagaagaTAGCAAGCAGGGAGAAAGAAGAGCATAAAGAGAGAAAATGAGAGTAGAGAAGAATGAAAGAGGAAAAGA .:...::x...:..x.xx.x.:.....x.....x.:.:x:.x....:::.:.......::..::..-...:::..:.:..:.......----------------------.:......:..:...:.:..-.....:x..:....:x:..:...x....::::::.xx..:.:...:......:.:....x:..x..---...::....::......-......::::.:...:...x:.:.....:x.::..:x..::........:..x.x.....:.:.:..x..:..x.:::.....x......:.:..... 66M1I21M22D20M1I66M3D17M1D98M 192/288 66.7% 290/94230402 0.0% 28/288 9.7% 107406697 82807858 +3594 chr4 + 190214555 147350409 147350408 147350573 165 GAAAGAAGAAAGAAAAAGAAAGAAAGA--AGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGA-----TGGAGGGAGGAAGAAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAA-GAGAAAGAAAGAAAGAAGGAAG chr4 + 94230402 56107290 56107289 56107462 56107290 56107289 56107462 173 GAGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGATTGAGGAACAAG ..::......x.x.:x:....:..:..--......x....x:x.x.:..:.x.x::x....:::x.:::..:.::.x..x:.:..:....x:.:..x:..-----.x..x.:.xx.x..:x.x....:x.:...:........x.:....-.......x:.xx:..:.:x... 27M2I71M5I45M1I22M 101/165 61.2% 173/94230402 0.0% 8/165 4.8% 91243119 NA +3648 chr4 + 190214555 147350409 147350408 147350514 106 GAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGA chr4 + 94230402 58935721 58935720 58935825 58935721 58935720 58935825 105 GGAATGAGAAGAAAACAGTGACTAAGGAA-AAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAATTGTGCAGGAA .:..x:....::...x..x:.xx...:.:-....:.....:...:..:.x.......x..:::.x:......x..x.x..:.:.....:..:..:xx:..x...:. 29M1D76M 69/105 65.7% 105/94230402 0.0% 1/105 1.0% 88414688 NA +3079 chr4 + 190214555 147350426 147350425 147350526 101 GAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGAAAGGAG chr4 + 94230402 57629693 57629692 57629789 57629693 57629692 57629789 97 GACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACC----CATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGAG ..x....:...:.x:x.x...x:xx...:..x...xx..x.xx----..x.:...::..:x:..:.::..:..........x:...:......:....... 43M4D54M 64/97 66.0% 97/94230402 0.0% 4/97 4.1% 89720733 NA +4651 chr4 + 190214555 147350449 147350448 147350598 150 AAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGAAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAA--GGAAAGAAAGAAGGAAGAAAGAGAAA chr4 + 94230402 84536569 84536568 84536718 84536569 84536568 84536718 150 AGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGA--GAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAA .::.....::..::..:...:x......:.x..:...x:.........::........--....:..:.:xx.x.x..x..:.xx.:x.:xx...:x.xxx..........x.:.x......:.--..:.:...:::.xx.....:.x:... 58M2D64M2I26M 97/148 65.5% 150/94230402 0.0% 4/148 2.7% 62813880 NA +4014 chr4 + 190214555 147350518 147350517 147350745 228 AGAAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGA-AAGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAA---AGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGA-----------AGAAAGAAAAAGAAAGAA---AGAAAGAAAGAAAGAAAGAAGGAAAG-----------AAAGAAAGAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 1317354 1317353 1317607 1317354 1317353 1317607 254 AGAGAGCAGAGAGGCACACAAGCTAAGGATG---GAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAATGCCAAAAA ...:..x...:..:x.x.x..:xx..:..x.---........xxxx..:.x:.x..:.-....xx::........:..:..:......:.:......x..xx.:..x..:.::x....:x:.---..:.:.:...:..x.:....x.x:.:x.::....-----------......:..::.x.:xx.---::.x:....:::...:xx.....:..-----------...:x..x:.::....::..x.xx.:... 31M3D24M1I63M3I34M11I18M3I26M11I29M 140/225 62.2% 254/94230402 0.0% 32/225 14.2% 146033164 44181391 +3371 chr4 + 190214555 147350537 147350536 147350691 155 AAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGA------------------------AGAAAGAGAAAGAAA-GAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAA chr4 + 94230402 75176342 75176341 75176519 75176342 75176341 75176519 178 AAAACAAAGAAGGAAGGGCAAATAG--AAGAAGCAAGAAAACAATGCATTATTTCAGATATTACAACTACTCCTTAGAATAAGTAATCAGTGAACAGAGTATGAAGCAGAGAAAAAAAAAGGAGGAAGTAAAAATCAAGAAAAAGAGGAATGAAGAAATTAATGAGGGACAAGGAAGGAA ....x.......:...:.x..:x.:--......x...:...x..x.x.xx.------------------------....x:..x..xx.:-...x::..x.x..::x...:.:...:..:.:.....:x...:.xx:.:.x......:..x:......xx..x:.:.:.x...:...:.. 25M2D24M24I15M1I89M 100/153 65.4% 178/94230402 0.0% 27/153 17.6% 72174195 NA +3821 chr4 + 190214555 147350545 147350544 147350754 210 GAAGAAAGAGAA--AGAAAGAAAGAAG---GAAGGAAAGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAA-----------GAAAGAGAAAGAAAGA-AAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAA--------------AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 80333338 80333337 80333578 80333338 80333337 80333578 241 GGAGAAAGAGGATCAGTAAAAGAGAAATGCAGAGGTGACAAAGATGTAAGTAACTCCAAGCTAGAAAGAAAGTTCTCTGTTGAAGGTCACAAAAGCAGAAGCATAAAGCACAGCAACAAGGAAATAAAGAAAAAGGAAGAATGTACCAAAGTAGAGGATAAAGATATGAAAGAAATGGACGGTGGACATGAAAAAGTAATGGGCATCACAGTGACAGTGGACAAAAAACAAAGTAAAAAGG .:........:.--..x..:.:....:---::...x:.x.....x.x...x..xxxx...xx........-----------...:.xx.x.:..:x.-...x.x:...x.x..x..x.............:....:.....x:x.xx....x.:.:..x.:.:.x.x::..::..x.:.x.:x...x.x:..:..--------------..x..x..x:::x..:...x....x..:..:. 12M2I13M3I40M11I16M1I97M14I32M 136/210 64.8% 241/94230402 0.0% 31/210 14.8% 67017207 NA +3191 chr4 + 190214555 147350630 147350629 147350728 99 AGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAA chr4 + 94230402 45777115 45777114 45777210 45777115 45777114 45777210 96 AGGAAGGGGCGATAGAGAG---TGACATGAGAGATGGGAAATCAGGATCAGAAAGACAGAGGAATGGAAAGGGAGATAGAAGGGAAGCAAGAAGTAGAA .......::x..x...::.---.:.x:x..:...x:.:...xx..:.xx.:.....x...:::.x:.....::...x......:...x.....:x.... 19M3D77M 63/96 65.6% 96/94230402 0.0% 3/96 3.1% 101573515 88641040 +3517 chr4 + 190214555 147350632 147350631 147350745 114 GAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 7358267 7358266 7358382 7358267 7358266 7358382 116 GGGGAGAAAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGACCTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAAATGAATAGA .::.::..:.:......:.x.x:.....:..x...:.:......:...:...:.x:..:..:.xxx.:...:..--.::.xx::..x:x...x...::.:...:....x:..x.:. 74M2I40M 70/114 61.4% 116/94230402 0.0% 2/114 1.8% 139992365 50222190 +3596 chr4 + 190214555 147350643 147350642 147350918 276 AGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAA-GAAAGAAAGAAAGAAA---GAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAA------AGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGGCAGGAAGGAAGGAAGGGC---------AGGAAGGCAGGAGGAGG-----------------GGGAGGGGGAGA-----GAAGAGGGAGGGGAGGGAAGGAAAGGG--AAGGGGGAA---AGAAGGGAAGGGAAGGGAAGA-----GGGATAAG chr4 + 94230402 79262861 79262860 79263184 79262861 79262860 79263184 324 AGAAG--AATAGAG-GAAAGAGGGAAAAGAAGGCAAAAAAAGAGAGGGACTAAACCAGGAAAGAAATCTGATGGCACTGAAGAGTGAGAGTGGAGAGAAGCATTAACTGGAAGGTGAAAGGGAAAGAGGGAAGCTGATTATGGGAGGGTTAGAAGTCAGTGAGAAAAACATGGACAGTGAATGGGGAGCTGCTTAGCTGCATGGAGGGCACGAAGAGATGCTCTTGCCTTGTCCCTGGCTGGATAGAATGCTGAGCAAAGGGAGGAGGGATGGAGTCGGACAAGGCGGAGTGCAGAAAAGTAGGAGACAGAAGATCCTGGGGAAAAG .....--....:..-......::.........:x.:.......:..::.-x...xx.:........---..x..x.xx:....:x....:x.:.:::...x.------:...:.x:.:.::......::..::xx..xx:x.:..::.xx....:xx.:x..:::..:x.x..:...x:.:x::...:xx..---------x...:....x..:...:-----------------x..xx..:x...-----..:x.::.:.:.......x...:xx..--....x...:---....::.x...::.x:.....-----....x... 5M2D7M1D34M1I16M3I33M6I84M9I17M17I12M5I27M2I9M3I21M5I8M 173/273 63.4% 324/94230402 0.0% 54/273 19.8% 68087782 NA +3662 chr4 + 190214555 147350660 147350659 147350830 171 AAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGAAGGA--------AGGGCAGGAAGGAAGGAA--GGGCAGGAAG chr4 + 94230402 49044652 49044651 49044821 49044652 49044651 49044821 170 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTG---GTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAA---------AATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG ..:.:.xx.....::......x....:.xx.:.::x.---.xx.......x:::x..x:....:x.xx...x:......:-....:xx..........::..:.x....---------..x........:...:...x....x.--------..:x:......:::.:..--.:...:x... 37M3D40M1I28M9D26M8I18M2I10M 107/159 67.3% 170/94230402 0.0% 23/159 14.5% 98306008 91908547 +3484 chr4 + 190214555 147350667 147350666 147350804 138 AAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGAAGGAAG chr4 + 94230402 49044652 49044651 49044781 49044652 49044651 49044781 130 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAA-----AGGTGAAAAATGAAAGAAAAGAAAGAATGAAG ......xx.....:...::..x..:::.xx.::.:x:.xx....:..x.::x..x:...::x.xx...x:......---.:....:xx.........::..-----..:x:..:..x.....:..:...:...x.... 76M3D22M5D32M 83/130 63.8% 130/94230402 0.0% 8/130 6.2% 98306015 91908540 +3022 chr4 + 190214555 147350720 147350719 147350779 60 GAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGAAA chr4 + 94230402 29014678 29014677 29014737 29014678 29014677 29014737 60 GAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ...:...xx.x....:....::.:.::::.....:...:.............:.:x.:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 118336042 71878513 +8568 chr4 + 190214555 147355274 147355273 147355523 250 ATTCCAGCTAGATAAGCAGTCTGAGTGAGGGACAAGAGTAGTGGGGGAATGGGGAAAAGGAGATCATAAAGCCAGGAAAGAGAAAGGTTCATTAAACTCGAGTTTGAAAGGAAATTGTATAAGCAGTTAAT--AAAGAGATCAAAACACGAGGGGTATGTTCCCAGGACCCTGGGCAAGTCAG-CATCTGGCAGCTGACTTGT----ATATGGTAATGTGAACAAAGTAGATATA----------GAAAACACAGTGGCTTAAGAAT chr4 + 94230402 33007046 33007045 33007298 33007046 33007045 33007298 253 ATTCCAGCTAGTTAGGCAGCCAAAAT-----CTCATTGCAGTGAG---------AAGAGATGATCACACACACATTCAAGGACAAATCTCATGAAACTCATGTTTGACAGGAAATTGTACAGGAAGCTAATTCAGAGAGATCAAAATAAGGGTGGTATGTTCCCAGGACCCAGGGCAAGTCAGAAATCTTACAGCTGAATTTTGTACATATGGTAATTCGATCAGAGTGGATGTAACAGAGAAGGGAAGAACCAGTTGATTGAAAAT ...........x..:....:.x:.:.-----x:x.xx.:....:.---------..:..:x.....:.x.xx..xxx...::x..:x:....x......:x......x...........:.:.x..:....--.:...........:.x.:.x..................x...........-x....x:.......x..x.----..........x:..x..:...:...:..----------...:.xx....x.x..:.:... 26M5D14M9D77M2I50M1I19M4I28M10I22M 175/236 74.2% 253/94230402 0.0% 31/236 13.1% 114348228 75866327 +3454 chr4 + 190214555 147364950 147364949 147365032 83 CATGGTGGCACACACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGGGAATTGCTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--....:.:.........:..:........x.xx.x...x::.....:.....:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 71331753 NA +3867 chr4 + 190214555 147406831 147406830 147406933 103 CATGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCGGGGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG--------AACATGATGCCA ..::........:.--....:.:.........::::........x.xx.x...x................x:xx:..:..::.--------..x..x...... 14M2D67M8D12M 69/93 74.2% 93/94230402 0.0% 10/93 10.8% 71373634 NA +6900 chr4 + 190214555 147442607 147442606 147442887 281 ATTGAATATTTTG-TTCATTATAAGACTGCCAAGACTGGGCATGTAGCTCTTTGGAGTAAGTAATTATTACCCCCTTTGTTACTTTAACCGCTGCCTCTGAAAACAATTTAGTCCAGACTTGTCAATTAATACCGGAATCATTAGTTTTTGGCAACC------ATGGCTTCTTGATAGCTTTTCCTCTATTCTAGCCAAATCCTGGTAGCTATAATCACAGAGATTCTTTTC--AATGTTCTATAACTGGG--------TTGTCATTTTTAAATTGTAGCCAAAAAGAGTATTTCTCA chr4 + 94230402 33023264 33023263 33023543 33023264 33023263 33023543 280 ATTGAAAATTTGAACTCTTTAGAAAATTGCAGAGACTACGTTTGTGACTATCTGGAGGCAACAATTATT---------GTTACTAT---------CTCTAGAGAGTACTCGGCCCAGACATGTCTATTAATACCAGACTTATTAGGTCTTGACAGTTTATAGGACATCTGTTTGTTTCATTTCCCTTTAGTCTCGCCAAATGCTAGCAGCTAAAATCAGAAAGACTTTTTTCCTACTTTTGCATAACTTGAAAGACTTTTTAGCATATATGAATTTTGACAATAAACAAAATCTTTTA ......x....x:-:..x...x..:.:...x:.....:x.:x...::..x.:.....xx.::.......---------......x.---------....::.:.xx.:.::.:......x....x.........:..x.:.....x.:...:..:::------.::x..x:...x.xxx...:...:..x...x.......x..:.:.....x.....x.:...:.:.....--.x.x..x:......x.:--------..:x...x.x.:....x.::.x.x...x.:x..:.:.:. 13M1I55M9D8M9D62M6I69M2I17M8I39M 177/263 67.3% 280/94230402 0.0% 35/263 13.3% 114419343 75795212 +3200 chr4 + 190214555 147448981 147448980 147449055 75 TAAAGACCACAGTTTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCACTCTTGTCAC chr4 + 94230402 6141948 6141947 6142015 6141948 6141947 6142015 68 TAAGTATAACAGTTTTCTCCTGTTCATTTTTCATTTCTTTTTTTTTTTTTTGAG-------TTTTCTCCTGTTAC ...:x.:x........:.:..x..:x.....:x...:.................-------..:x...:...:.. 54M7D14M 52/68 76.5% 68/94230402 0.0% 7/68 10.3% 141307033 48907522 +3139 chr4 + 190214555 147453965 147453964 147454065 101 TCTCTCTCTTTCTCTGTCTCTCTCTCACATGCACCACACACACACACACACACACACACACAAAGGGAGCAGAGTTCTAGTTGAAGATACTCAATTTACAA chr4 + 94230402 61957753 61957752 61957851 61957753 61957752 61957851 99 TTCCTCTTTTTTTTTTTCTCTTTCTATTATGAG--GCTTCCACAGACACACACACACACAAAAATAAAGCGTTGTTGCAGATGCAGACACAAACCTTGCAA .::....:...:.:.x.....:...xx:...x:--:.x:x....x...............x...x::...:xx...x:..x..x...:..xx.x:..:... 33M2D66M 65/99 65.7% 99/94230402 0.0% 2/99 2.0% 85496212 NA +3412 chr4 + 190214555 147463605 147463604 147463686 82 CATCGTGGTGGGCACCTGTAATCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAGGCAGAGGTTGTA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..:x......--...x....:.:.....:.....::........x.xx.x...x........:.::.:..x:xx:..:.... 10M2D70M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 71430408 NA +18122 chr4 + 190214555 147485675 147485674 147486118 444 CCTCAAGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCACTGGTTGGATGTGTAATCAGTGATAATCCTGAGAGATACAGCACAAATCTAAGCAATCATGTGGAT-GATTTCACCACTTTTCGTGGCACAGAGCTCAGCTTCCTGGTTACCACTCATCAACCCACTAATTTGGTCCTACCCAGCAATGGCTCAATGCACAACTAT----TGCCCACAGCAGACTAAAATTACTTCAGCTTTCAAATACATTAACACTGTGATATCTTGTACTATTTTCATCGTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATCATTTACCAGAACAAATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAGACCTTATCTATGTGGTCATTGATCTCCCTATCAATGTATTTAAGGTAGGAAGTAACCACAA chr4 + 94230402 33034796 33034795 33035221 33034796 33034795 33035221 426 CTTCGTGATGGAAGCCTTGTATTTGCGAGTTTCTTCACTGCTGCTGTTGTTGGGATTTGTCCTCTGTGACAGCTCTGACAAATACGCTACCAATTGGAGTGAT-GTGGGAATCTACCTTCCCACCTCCTCAGGGATTGAATCCAGTTTACTCCCCACCACTAGACGGCC------TCCGGT---ATCCAATCA-------------AACTGTCAAATGCTCCCAGCAGACTAAGATTGCTGAAACTTTTAAATACATTAACACAGTGGTATCTTGTGCTATTTTCATCGTTGGAATGGTTGGGAATGCAACTCTGCTGAGGATCATTTACCAGAACAAGTGTATGAGGAATGGCCCGAATGCACTGATAGCCAGTCTGGCACTAGGAGACCTTATCTATATTGTCATTGATATTCCTATCATTGTGTACAAGGTAGGATGCAACAACAA .:..:x.......:..:.x.:::.xx.:.:x..:.:x:x....x:::..x.x....x...xx..x....:.:::....x.:....:x:..x...:x:..::..-:..x.:..-x.::.:x....:.:::xx..x.:x..:::...:..x..xx::......x:x.::..------.::...---.:...::x.-------------....:.----...:.x...........:...:..xx.:....:..............x...:........:.............x........x.................x....................:.................x..:..:..............x..x..x...............:.x.........x.:.......x...:.x:.........x.:...x.... 103M1D8M1I56M6D6M3D9M13D6M4I233M 307/421 72.9% 426/94230402 0.0% 28/421 6.7% 114450879 75763676 +10001 chr4 + 190214555 147485916 147485915 147486106 191 TTCAAATACATTAACACTGTGATATCTTGTACTATTTTCATCGTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATCATTTACCAGAACAAATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAGACCTTATCTATGTGGTCATTGATCTCCCTATCAATGTATTTAAGGTAGG chr4 + 94230402 11258718 11258717 11258908 11258718 11258717 11258908 191 TTCAAGTACATCAACACCATCGTGTCCTGCACCATCTTCATAGTAGGGATCATCGGGAACTCCACACTCCTCAGGATCATTTACAAGAACAAGTGCATGAGGAACGGGCCGAATGTTCTCATTGCTAGCTTGGCACTTGGAGACCTTCTCTACATCCTCATTGCTCTGCCCATCAATGTCTATAAGGTAGG .....:.....:.....::.x:.:..:..:..:..:.....x..:..:..x:.x.....:x.x..x..x...............x.......:..:........:..x..x..:.:x..x..x..:..::.x..x............x....::.xx......x...x..:........x.x......... 191M 143/191 74.9% 191/94230402 0.0% 0/191 0.0% 136227198 53987357 +3137 chr4 + 190214555 147504818 147504817 147504900 83 CATGGTGGCATGCACCTGTGGTCCCAGCTACTCTGGAGGCTGAGGCTGTAGAATCACTTAAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x...:..:.........:x::........x.:xxx...x.....:....::.:..x:xx:..:..:.. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 71471621 NA +3060 chr4 + 190214555 147505198 147505197 147505248 51 AATGTAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGACAACATCTAATTCT chr4 + 94230402 11613204 11613203 11613254 11613204 11613203 11613254 51 AATGTTAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGTCAGCAAACATTTCT .....x.............:.:...........:..x..:..xx:.x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 135891994 54322561 +3393 chr4 + 190214555 147523447 147523446 147523527 81 TTTGTTGGGTGTTTGTTTTTTTTTG---------------------------TTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTGAGATGGAGTCTTGCTCTG chr4 + 94230402 27947657 27947656 27947764 27947657 27947656 27947764 108 TTTTTTGTTTGTTTGTTTGTTTTTGGTGTGTGTGGGGGGGGAGGGGGGGGGGTTGTTGTTGTTTTTGGGTTTTTTTCTTTTTTTTTAATGAGGGACAATCTTACTCTG ...x...xx.........x......---------------------------..............xx........:x........xx....:x:x.:....:..... 25M27I56M 65/81 80.2% 108/94230402 0.0% 27/81 33.3% 119575790 70638765 +3084 chr4 + 190214555 147523456 147523455 147523524 69 TGTTTGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTGAGATGGAGTCTTGCT chr4 + 94230402 73409397 73409396 73409465 73409397 73409396 73409465 69 TGTTTCCTTGGTTTTGTTGTTATTGTTTGTTTCTTTTTTATTTGTTTATTTCAGATCTGGAGGATTGCT .....x:..xx..........:......x...x......x.x.x...x...:x..xx.....xx..... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 74114059 NA +3011 chr4 + 190214555 147523459 147523458 147523495 37 TTGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTT chr4 + 94230402 81178912 81178911 81178948 81178912 81178911 81178948 37 TTGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTT .........x...............x........... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 66344547 NA +3318 chr4 + 190214555 147523460 147523459 147523516 57 TGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTGAGATGGA chr4 + 94230402 91301632 91301631 91301688 91301632 91301631 91301688 57 TGTTTCATTTTGTTTTTGTTGTTTTGTTGTTGTCTTTGTTGTCTTTTAAGAGATGAA .....:x.......x..........x.....x.:......x.:....xx......:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 56221828 NA +3145 chr4 + 190214555 147523464 147523463 147523502 39 TTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTT chr4 + 94230402 65128956 65128955 65128994 65128956 65128955 65128994 39 TTTTTTTGTTGTTGTTGTTTTTTTGTTCTTTTTGTCATT ...........................:.......:x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 82394508 NA +3045 chr4 + 190214555 147523466 147523465 147523511 46 TTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTGAG chr4 + 94230402 6207738 6207737 6207783 6207738 6207737 6207783 46 TTGTTGTTATTGTTGTTTTTCTGTTTTTTTTTTTTTTTCTGTAGAG ..x.....:...........:..........x......:.x.x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 141315728 48898827 +12487 chr4 + 190214555 147532496 147532495 147532707 212 TTTTTTTCAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAATTGTCTCCATCTGGATCCTGTCCTTTATCCTGGCCATTCCTGAAGCGATTGGCTTCGTCATGGTACCCTTTGAATATAGGGGTGAACAGCATAAAACCTGTATGCTCAATGCCACATCAAAATTCATGGAGGTA chr4 + 94230402 33052170 33052169 33052381 33052170 33052169 33052381 212 TTTCTTGCAGGTATAGAGCAGTTGCCTCCTGGAGCCGTGTTCAGGGAATCGGAATCCCTATGATCACTGCTATTGAAATTTTCTCCATTTGGCTTCTGTCTTTTATACTGGCTATTCCAGAAGCCATTGGTTTTGCCGTGGTACCTTTCAGATACAAGGATGAAAGTTATGTTACCTGCATGCTCAACCCTACAAATAAATTTATGTTGGTA ...:..x......:....................:..............:..:..:...x..:.x.....:.........x.......:...x.:.....:.....x.....:.....x.....x.....:..:.:.:.......:..:::...:.:..:....x:x:..:xx.....:........:x.:...xxx.....:...xx.... 212M 164/212 77.4% 212/94230402 0.0% 0/212 0.0% 114480326 75734229 +4853 chr4 + 190214555 147532503 147532502 147532638 136 CAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAATTGTCTCCATCTGGATCCTGTCCTTTATCCTGGCCATTCCTGAAGCGATTGGCTTCGTCATGGTA chr4 + 94230402 11261017 11261016 11261152 11261017 11261016 11261152 136 CAGGTATCGAGCAGTGGCCTCCTGGAGTCGGATCCAGGGCATAGGAATCCCCATGTGGAAGGCGGTGGAGGTGACAGTGATCTGGGCAGTGGCCATTGTGCTTGCAGTCCCTGAAGCCATAGCCTTTGACATGGTA ......:x.......x..............x:.:.....x..x..:..:..:x..xx:.xx..x:.x..::.x::xx:x......::xx..x..x..:.x..x..x:.:........x..x.x...:.x....... 136M 90/136 66.2% 136/94230402 0.0% 0/136 0.0% 136271486 53943069 +8793 chr4 + 190214555 147533346 147533345 147533642 297 TGACTGTTTTGGGAAACCTATTTAAAATGCATCTTTTCTTTGCAAAACTAGTTACATGTGGACTGAGGAGGAAAACCAAAAGGATAACTATTTCTCTTAAATCAGTATAATTTAGTGCTTTGATGTAAGTTTCATGTAGCTCACATTCCACATGTAATTATTTACAGACATCTCAAGGTATGCTTTCCCAACTTGGAAAATTC----------ACAGAATTCGTGGTTTTACAGTTGACCA--GTTAT----CCTGCTTGGAAATTCTTGTTTTAAAATTAAAAGTGCTCATGAAAACTGCCAAACTAACAAC chr4 + 94230402 33054152 33054151 33054453 33054152 33054151 33054453 302 TAACTGCACTAGGAAGCTTATTTAAAATGCACATTTCCTGTAGAAAACTAGTTCCATGTGGGCTTTCAAGACAAAC-AAAAGAACGTCTAGTTCTCTTAAATCAACCCAGTTTTGTGCTTTGATGTAAGCTTTGAGAAAGTCAGATTCCATAATTAATCATTTGCAGACATTTTTGTGTAGGATTT-GTAACTTCACAAAGTCAGGTTTTCGTACAGAATTCGTGT-------GTTGGTCAGGGTTGTGAAACAGGACTGTGAATGCATTGACTGACAT--GCAGTACTCATGAAAGCTGGTTAACAAATGAC .:....:x:.:....:.:.............:x...:..x.:x..........x.......:..xxx:..:x....-.....:.::x...x.............::x:.:...x...............:..::x.x.:x...x......:.xx....:....:.......:.:x:x...x.x...-x:.....x:x...x..----------............x-------....::..--...:.----.xx.x:..x:...x.x.xxx:.:.x..--:x...:.........:...x:x...x..::.. 76M1D109M1D16M10I13M7D8M2I5M4I27M2D32M 200/286 69.9% 302/94230402 0.0% 27/286 9.4% 114479194 75735361 +9853 chr4 + 190214555 147535837 147535836 147536033 197 CTGCTCCTCCTTTTCTCTTTTTTTTTTTTTCACTTTGAAGTTCTACCAAGATGTAAAGGACTGGTGGCTCTTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCTTGAGAATTGCCCTCAGTGAACATCTTAAGCAGGTAA chr4 + 94230402 11261993 11261992 11262186 11261993 11261992 11262186 194 CTTCTTCCCCATTTCCAGTTCCTCTCTGTTTTCCATACAGTTCTATCGTGATGTGAAGGACTGGTGGCTTTTCGGCTTCTACTTCTGCCTCCCCTTAGTATGCACTGGCATCTTCTACACCCTCATGTCATGTGAAATGCTGAGCAAGAGAAATGGCA---TGAGAATCGCTCTGAATGACCACATGAAACGGGTAA ..x..:.:..x....:xx..::.:.:.x..:x.:x.:x.......:.:x.....:..............:.....x.....:.....:x.x.....:..:.......xx..................x.x.....:...:...:..::..:.......---.......:..:..x.:...x..:x.x..:.:..... 158M3D36M 144/194 74.2% 194/94230402 0.0% 3/194 1.5% 136273844 53940711 +12356 chr4 + 190214555 147535845 147535844 147536035 191 CCTTTTCTCTTTTTTTTTTTTTCACTTTGAAGTTCTACCAAGATGTAAAGGACTGGTGGCTCTTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCTTGAGAATTGCCCTCAGTGAACATCTTAAGCAGGTAAAT chr4 + 94230402 33056096 33056095 33056281 33056096 33056095 33056281 186 CTTTTCTTCTCTTTACTTTATCCAC-----AGTTTTACAAAGATGCAAAGGATTGGTGGCTGTTCGGTTTCTATTTCTGCATGCCACTGGCGTGTACTGCCATCTTCTATACACTAATGACTTGCGAAATGTTAAACAGAAGGAACAGCAACTTGAGAATTGCTCTCAGTGAACACCTTAAGCAGGTAAAT .:...::...:...x:...x.:...-----....:...x......:......:........x.....x...........:.....x:...:...:.....x........:..x..x........:..:.....:...........::...:............:...........:............... 25M5D161M 155/186 83.3% 186/94230402 0.0% 5/186 2.7% 114479749 75734806 +13051 chr4 + 190214555 147539796 147539795 147540492 697 TTTTTTCTCACTTTCCTTTAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCTTGGTTGTAATTTTTGCTCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATTGAAGAAAACTGTGTATAACGAGATGGACAAGAACCGATGTGAATTACTTAGGTA--TGATCCTGTGTACTCGCTAGAAAATTGGAGTTTCTCAGAT---------TTTCATATTTATAATACTTTTACAAAACCAGCTACTCTACATGCCCGTTAGCCCTGAAAATTA-AAACTGCA---------AAGTTGATTTTTTTCTTTAGCTGACATAGCCTATAACTGATCCCAAAATGTGTGCAAGCCACATCTGTTATCTTGCCCCT----CCCCTCC---------TGAGGCTGTGCATAAGGGTTTGAGCTAACCAACTAGTGATGTATCT----GTAACTGTCCTGCAAAACTGAAACTGCCGTTTAAACAAGCACTTTTTACAAAATTCTAACTGCCACCCATACGAAATGGCTTCTGGGCAAGAAAA-----ATGCTTATTCTAGGAAGAAATGCTAGTGAGCAGATTTTAAAACAATATATTCTAATTATTCTACACCATTTTCTTTTGCTCTAGTTTCTTACTGCTCATGGATTACATCGGTATTAACTTGGCAACCATGAATTCATGTATAAACCCCATAGCTCTGTATTTTGTGAGCAAGAAATTTAAAAATTGTTTCCAGGTAAGAT chr4 + 94230402 33058204 33058203 33058852 33058204 33058203 33058852 649 TCTTTACTTATTTTC---TAGCGTCGAGAAGTTGCAAAGACAGTTTTCTGCTTAGTAGTGATATTTGCTCTTTGCTGGTTCCCTCTTCATTTGAGCCGAATTTTGAAGAAAATGGTATATAATGAAAGAGATCCCGGCAGATGCGAACTGCTCAGGTACTTCATTTTCCATATCAATCAGTTACTTATA----CTCAAAAAATATATAATGTCATGCATTTGAAGATTATGTGGGAAATGTCACCGTGCATGCTACTTCATTTTATGATTTTTCAACCACACCCATTTTCAGGTGGATGTTTT------AATGGCGTAGC--ATAATT-ACAATAAATACTATATAGATGGCCATTGTAATCTCTTCCCTGTGGCTCTTTTAAACTTCTGTGAGGCTGTTCATTATAG----------------------GTATCTCATGGTAAAAG----ATAAGATTAAGAGAGGTGAGAAAGAATTCATTTTTG-------------TG--------ATGGAAGAGACTGTAAACACAAAAACGAGTATGCTTCTAC------------------AGCATAT----GAAGAATGTAT---AA--GTTTTGCTTTTTTTTTTTTTG-TCTAGTTTCTTGCTGCCATTGGATTATATCAGCATCAACCTGGCAACTATGAACTCTTGTATAAACCCAATAGCACTCTATTTTGTGAGCAAGAAGTTTAAAAATTGTTTTCAGGTAAGAT .:...x..:.:....---..............x.....:..............:..x..:..x.............................:.....x..x..........:x..:.....:..:.x:..:xxx::.x....:...:.:..:.....--.x..::.x::..::x:::..xx.x..:x.----....:.x---------.x....::x.x.:.x:x..x.:::::.xxx.::..:x.:.....:xx..x::::.:x:.x..x-x...::..---------.:..x...x....------:x..:.:....--....:.-.:xx:...xxx.:.::.:::x:.xx:...x....:x:....----.:.:.::---------.........x...x.x:.----------------------......----....xx.----::..:.:.:.:.xx.x:.xxx..:x.xx..:....x-------------..--------.:.:..x:.x:.x.:::..x:....-----......x.x.------------------....x..----:..x...:...---..--:..:.:.x::x....:.....-...........:....:xx.......:...:.:..:...:.......:.....:..x...........x.....x..x.................:..............:.......... 15M3D140M2I29M4D7M9I63M1I8M9I13M6D11M2D6M1D41M4I7M9I18M22D6M4I7M4D36M13D2M8D25M5I10M18D7M4D11M3D2M2D21M1D121M 415/606 68.5% 649/94230402 0.0% 134/606 22.1% 114481592 75732963 +6880 chr4 + 190214555 147539806 147539805 147539956 151 CTTTCCTT-TAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCTTGGTTGTAATTTTTGCTCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATTGAAGAAAACTGTGTATAACGAGATGGACAAGAACCGATGTGAATTACTTAGGTATGA chr4 + 94230402 11262798 11262797 11262949 11262798 11262797 11262949 152 CTCTCCTTGCAGCGTCGGGAGGTGGCCAAAACCGTCTTCTGCCTCGTGGTGATCTTTGCGCTCTGCTGGCTGCCGCTCCACCTCAGCCGCATCCTCAAAAAGACCATCTATGATCAGACAGACCCCAACAGATGTGAGCTGCTCAGGTAAGA ..:.....-:.......:..:.....x.....x..:......:.x..x..:..:.....x..:......:.x..x..:..::.x.....:..x:.x..:..:..::.x...:.:x...::...xxx...x.......::.:..:.....x.. 8M1I143M 107/151 70.9% 152/94230402 0.0% 1/151 0.7% 136277008 53937547 +5708 chr4 + 190214555 147540365 147540364 147540490 126 CTTTTGCTCTAGTTTCTTACTGCTCATGGATTACATCGGTATTAACTTGGCAACCATGAATTCATGTATAAACCCCATAGCTCTGTATTTTGTGAGCAAGAAATTTAAAAATTGTTTCCAGGTAAG chr4 + 94230402 11263241 11263240 11263366 11263241 11263240 11263366 126 CTCTTACCACAGTTTCCTCCTCGTCATGGATTACTTTGGGATCAACATGGCCTCTCTCAACTCCTGCATCAATCCTGTGGCTCTCTACTTTGTCAGCCGAAAATTCAAGAACTGCTTCCAGGTAGG ..:..:.:x:......:.x..xx...........x.:..x..:...x....xx.:x.x..:..x..:..x..:..::.:.....x..:.....x...x::.....:..:..:..:.........:. 126M 88/126 69.8% 126/94230402 0.0% 0/126 0.0% 136277124 53937431 +9972 chr4 + 190214555 147542434 147542433 147542729 296 GGGCTGGTAGGCTCGCCTTACTTCGAGTCTGTTCCTTCCCCCA--------GTCATGCCTCTGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCACGATCAAAACAACCACAACACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCC--CATAATCCTCTCGGAGAA-AAAAATCACAAGGCAACTGTGAGTCCGGGAATCTCTTCTCTGATCCTTCTTCCTTAATTCACTC chr4 + 94230402 33060480 33060479 33060768 33060480 33060479 33060768 289 GAGCTGACAGATTTGTAATA-----ACTCTTTTTTTTCCTCCAAATTTTCAGTCATGTCTTTGTTGTTGCTGCTCCCAATCAAAAAGTTTAGCAACTTCAGTGCCCATGAATGGAACAAGCATCCAGTGGAAAAATCAAGAATTAAACAATCACAACACAGATCGAAGCAGCCATAAAGACAGCATAAACTGAAAACT-----AAGGACTC--TGACACTACTTCAGAATCAATCAGGAAAATAAATATCACAACAAAGTTGTTTCTACAAGAAGC------CTAATCAGTATTCCATCATCAATTC .:....::..::.:.:xx..-----.x...x..::....:...--------......:..:..:..:.....:.x...:..x......:.::::..:..:..x........:....................:..:..x..x:x......:...........:..:...........:........:......xx..:-----...x....--:.::...x.--..x....xx::x...:..-...x.......x:x.::...xxx.x.::...x.------..:...xx.x....x.x..:x.:.. 20M5D18M8I147M5D8M2D9M2I18M1I33M6D25M 199/278 71.6% 289/94230402 0.0% 29/278 10.4% 114481954 75732601 +3462 chr4 + 190214555 147555731 147555730 147555802 72 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGCACTTGAAACTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::........x.xx.x............x.::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 71522525 NA +3790 chr4 + 190214555 147558198 147558197 147558353 156 AAAGAAGAAAGAAAAAGAAAGAAAGCTTGAAGGAA-GGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGGAAGGAAGAAAAGAAAGAAGGGAAGACAAAGAGAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 14751856 14751855 14752007 14751856 14751855 14752007 152 AAAGGAGATCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAG-----AAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAA ....:...xxx..x.::.:.:.x.:x....:.x.:-..:....:..:.x:::....x:x.:..:x..::x.x:....x..:.:-----.:......:..xx.:.........:...::..:..x:.:..x.:..xx..:.:.::x..:....::.:. 35M1I47M5D69M 90/151 59.6% 152/94230402 0.0% 6/151 4.0% 132806342 57408213 +3832 chr4 + 190214555 147558303 147558302 147558447 145 GAAGGGAAGACAAAGAGAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----------AGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAA--------AGAGAAA-----AAAGAAAGAAAAGCAGGAGGAGGAGGAG---------GGAAGGAAGGAAGAAA chr4 + 94230402 723499 723498 723675 723499 723498 723675 177 GAAGGGAAGTCCAAGCAAAAAAGAAGGGAGGGAGAATGAATTTAGAAAAGGTAGAAGGAAATGTGTAATTAGGAAGATGGGACTGAGGAAAGGAAAAGAGATGATAAATTTCAGGGAAATCATCCAACAGAGAGAAGCAGAGGAGTGAGAAGCTGCCAGCTGGGAGGAGAGATGAGA .........x.x...x:.:.......::..::....x...xxx.::....:x....:...----------..:....x:.:.xx:.:.....::.....:.x:.--------..:....-----x..x.:...:......::.::x...:..---------..:....::..x..:. 60M10I34M8I7M5I28M9I16M 98/145 67.6% 177/94230402 0.0% 32/145 22.1% 146834804 43379751 +3071 chr4 + 190214555 147558321 147558320 147558403 83 GAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAA chr4 + 94230402 41112180 41112179 41112259 41112180 41112179 41112259 80 GAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAG---AATAAAGGAGGATAAA .....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:..---..x....:.:..x... 64M3D16M 58/80 72.5% 80/94230402 0.0% 3/80 3.8% 106446141 83768414 +3687 chr4 + 190214555 147558322 147558321 147558467 146 AAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAAGCAGGAGGAGGAGGAGGGAAGGAAGGAAGAAAGGAAGGAAGGAAGGAGACAA chr4 + 94230402 49044653 49044652 49044788 49044653 49044652 49044788 136 AAAGATTAAAGA--GAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAA--------GAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAA .....xx.....--....::..x..:::.xx.::.:x:.xx.......x.::x..x:....:x.xx...x:......:...:.:xx.......--------..:..:::.x...::.x.:......:...:...x....x...x.. 12M2D79M8D45M 88/136 64.7% 136/94230402 0.0% 10/136 7.4% 98513669 91700886 +3166 chr4 + 190214555 147558335 147558334 147558418 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAAGCA chr4 + 94230402 41112178 41112177 41112261 41112178 41112177 41112261 84 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x.....:.:.::..x.x......x....:.:..x..::. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 106446157 83768398 +3436 chr4 + 190214555 147558393 147558392 147558455 63 AGAAAGAGAAAAAAGAAAGAAAAGCAGGAGGAGGAGGAGGGAAGGAAGGAAGAAAGGAAGGAA chr4 + 94230402 18603679 18603678 18603741 18603679 18603678 18603741 63 AGAGGGAAAAGATATAATTAAAAACCTGAAGAGGAGGAGGGAAGGAAAGAGGAAAGGAAGAGA ...::..:..:.x.x..xx....:.xx..:.................:..:.........::. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 128954714 61259841 +3228 chr4 + 190214555 147574360 147574359 147574431 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGGTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x::x..........:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 71541154 NA +3475 chr4 + 190214555 147577214 147577213 147577290 77 GTTGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACCTGAGCTCCGGAGGTCGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......x......:.........::::........x:xx.x.:.x...:...:.:.x.:..x.:x:.....:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 71544013 NA +3311 chr4 + 190214555 147580239 147580238 147580322 84 ACATGGTGGCATGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--..::.x....:.:.........::.:........x.xx.x...x.:........::.:..x:xx:..:..:.. 9M2D73M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 71547043 NA +5997 chr4 + 190214555 147586594 147586593 147586843 250 ATTTGTTCAGATACTGGTTTCCACAATATGGGTCATCTGAAAGGATGCATAGCTTTATTGGGAATATAGCACATGGATGGATGGTCAGAGACTACAAGTCTGCTGAAGTTTTGTGGGAAATGAGCAGTTTGGCAGCCCCCGAGTCTG-GAGGGTCTGAGACTGGCATGCCAGAAAAGCTCCAG-GTCCGTAACAGCCTCTTTAAAACCATGAAGCCCT----------------------------TGGAGGCCCAGCTCAAGGGTTTCAGTATGTGTCA chr4 + 94230402 33072815 33072814 33073085 33072815 33072814 33073085 271 ATTGATTCAGAAAATAATTTCTATACTGTA--TCTTC--AAATTCTGTACTGCTCTTTGGGAAATGCACTAC-----TCTCCCGTCCAGCACTCAAAGTTTACTAAAGTTTTGTGGGAAAAGAGCTGTTTGGCAGCATCCCAGTCCATAAGGGTCTGAGAATGATGTCTCAGAAAGACTCAGGAGGCCTGAACAGCTACTTTAAAATATGGAAGAGCtttttttttttttttttctttttttttGGTTGAGGCCTAGTTAGGGGGTTTCAGTCTGTTCCA ...x:......x.x.::....:.:.x.:.:--..x..--...xxx..:.:x...:.x.x..:...::.x:..-----.xxx:x...x::x...xx....:.:..:...............x....x..........x:..x....::-:...........x..:::.x:......::...x:.-.x..xx......:x........:xxx....xx..----------------------------.x......:..:.x::..........x...x:.. 30M2D5M2D33M5D70M1I35M1I34M28I34M 163/241 67.6% 271/94230402 0.0% 39/241 16.2% 114513779 75700776 +3268 chr4 + 190214555 147592039 147592038 147592104 66 GTGGCACACGCCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAGCCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::....--...::.:...........::........x.xx.x...x.x.....:.....:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 71558838 NA +3067 chr4 + 190214555 147595394 147595393 147595452 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71562188 NA +3239 chr4 + 190214555 147600561 147600560 147600624 64 GTTACCATTATTGTTCCCATTTTACAGATAAGGAAATTGAGACACAAAGAGATTATATCTTACT chr4 + 94230402 28016192 28016191 28016255 28016192 28016191 28016255 64 GTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGTCTTTCT ..x.x..x....:................:::.....:.x..:...:....::.xx:....x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 119584369 70630186 +5212 chr4 + 190214555 147617936 147617935 147618087 152 GGATCTGATTTGTGCGAA---AACATGCCTTGCACTTGTACCTGGAGGAACTGGAGACAGTGGATTCGACCTTTAGTAGCGGTCATCTACCTGGTGTCAATAGTGGTTGCGGTTCCCCTATGCGTGTGGGAATTACAGAAACTGGAGGTAAGAGG chr4 + 94230402 33083960 33083959 33084108 33083960 33083959 33084108 149 gggcccgAGCGGAGCGAAGCGACCATGCCGTGCAC------CTGCGGCAATTGGCGGCGGTGGATCCGGCCGCTGGTGGTGCTGCTATACATCGTGGGGCTGCTGGTGGTCGTGCCTCTATGCGTGTGGGAGCTGCAGAAGCTGGAGGTGAGGGG ..::.:..x:x.x.....---.x......x.....------...x:.x..:...x.:.:......:..:..x:.:..:.:.x.xx.x...x.x...xx:x.:x....x.:x..x..:..............::.:.....:........:..:.. 18M3I14M6D114M 100/146 68.5% 149/94230402 0.0% 9/146 6.2% 114533976 75680579 +3208 chr4 + 190214555 147623305 147623304 147623377 73 TGGGTGTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::.....:.:.......:...::........x.xx.x...x.:.........x.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 71590100 NA +12342 chr4 + 190214555 147623791 147623790 147624106 316 TTAATATCAGAATTT--ATATTAACATGTTATTTTGTTTCTTAAGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGT-ATGTCTTAATAATTTTGATTCCACTAC---TGTTGTGTT--GGCTTATTTCATAAATA-------TGACATAAAATGTTTTAAATTTCTGTTTTCCTTTTCCAATAGGATTCTTTGGATGGTACCTATTTACAGTTTAGATAGTGTAAGTAT chr4 + 94230402 33084504 33084503 33084822 33084504 33084503 33084822 319 TTAATACCAGAACTTTGATCTCGCCCTCTTCTTTCTCTTTGCAAGGTTGGAATCCATACCAAGGCATGGTTTATCGCAGGGATATTTCTACTGATGACCATCCCCATCTCCCTCTGGGGAATACTACAACACTTAGTTCATTATACTCAACCTGAATTGCAGAAACCAATAATAAGGTAACATCTCACC--TTTTACCTCTGCTGCAAATATTGAATTCAAGTCAGATAAAAAAATATCTCTAGTAATATTAAATGTTC----------TTTTGTTATTGTAACAGGATTCTGTGGATGGTGCCGATTTACAGTTTAGACAGTGTAAGTGT ......:.....:..--..x.::x.x.x..x...:x:..:x:...........x..:........x........:..x..:..x...:.:...x....:..:..:..x..x..x....x:...:.:...........x........x.........:.:..:................-.::...:.x:--....:x:..::..:.---.:...x:..--:.::x:x.xx.x.....-------.:.:..x.......:----------....x:.x..x:..:........x........:..x..............:.........:. 15M2I161M1I10M2D15M3I9M2I17M7I15M10D62M 226/304 74.3% 319/94230402 0.0% 27/304 8.9% 114539287 75675268 +14776 chr4 + 190214555 147624795 147624794 147625017 223 TTTTCATAGTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGTCCACCATGGGCTATGGGAGAGTAAGTAT chr4 + 94230402 33087097 33087096 33087319 33087097 33087096 33087319 223 TTCTTGCAGTGGATAGCTTTGAAATACCCCAACATTGCAATATATGTGGATACGTGTCGAGAATGCTATGAAGCTTATGTCATCTATAATTTTATGGTTTTTCTTTCAAATTACCTAACCAACCGATATCCAAACCTCGTATTAATAATAGAAGCAAAAGATCAACAGAGACACCTGCCTCCCCTGTGCTGTTGTCCATCATGGGCTATGGGAGAGTGAGTAT ..:.:::...................:...::x....................x..:x......................x..:..:..:.......xx..:...x.x.....:.....:.....:........:..x........xx.x.....x.............:...::.x.....::.:..:..:......:..................:..... 223M 183/223 82.1% 223/94230402 0.0% 0/223 0.0% 114537698 75676857 +6607 chr4 + 190214555 147628334 147628333 147628443 110 AAATTCT----AAGTTCTTTTTCTTTTGCAGAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCACCATCGTTGCTTTGTAAGTAC chr4 + 94230402 33088010 33088009 33088123 33088010 33088009 33088123 114 AAATTCTTGTACAATTGTGTTTGTTTTGCAGAGTTCTGTTATTTAGGTGTAAACTGGGTGTTTTGCAGTACACTGTTGTCAGACCGTTTACTACTATTATTGCTTTGTAAGTAC .......----x.:..x.x...x...........x:..:.:........:.....:.....x..:........x...........x..:..:..:..::............... 7M4I103M 90/110 81.8% 114/94230402 0.0% 4/110 3.6% 114540324 75674231 +6695 chr4 + 190214555 147629593 147629592 147629699 107 TTTTAGAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATAAACAACATGTCACAGTTGGTAAGTA chr4 + 94230402 33089041 33089040 33089147 33089041 33089040 33089147 107 TTTCAGAATTTGTGAACTAGTAGGCGTGTATGATGAAGGAAACTTCAGCTTCGACAATGCTTGGACTTACTTGGTTATACTTAACAACATGTCACAGCTAGTGAGTA ...:.....:.....:..:x.x..::.:.....:.....:.....:.....:xxx..............:.........x.x...............:.:..:.... 107M 85/107 79.4% 107/94230402 0.0% 0/107 0.0% 114540552 75674003 +9089 chr4 + 190214555 147631312 147631311 147631535 224 CCAGGTCTCT-----GGTATGTAACTTTAATATTTCTATTACCATAT---CTATTACTGAACAAGT-------------TTAAATG--------TTAATCTTGTTTCTAGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGTAAGT------GTTACTTTTTTTTAAATGTTCTCA chr4 + 94230402 33090199 33090198 33090456 33090199 33090198 33090456 258 CCAGATCTTTTTAAAAATAGGCAAGTTTTGT-TTCATATTGTGATATGTTTTATTACTGAAGAAATGCCAAACAAATATTTAAAAGCTTTTTTTTTTATTTCCTTGTTAGTTTGCTATGTATTGTTTAGTGCTGTTTTATAAAGTACTACGTGAAGAACTGAACCCTATCCAACCTGTTGGCAAGTTCCTCTGTGTGAAGATGGTAGTTTTTGTTTCTTTCTGGTAAGTTAATTATTTACTACTTACTTCTTGCTCTCA ....:...:.-----::..x.:..x...x:.-..:x....::x....---:..........x..:.-------------.....x.--------..x..:.:x..x:........:.........:.xx....x...............x:x..........:...x.................:..:..:.....:...x....:..............:........------x.....x:..x:.xxx..:..... 10M5I16M1D15M3I16M13I7M8I135M6I24M 173/223 77.6% 258/94230402 0.0% 36/223 16.1% 114541113 75673442 +7224 chr4 + 190214555 147632898 147632897 147633007 110 TATAGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCTGAAAAGCATACGTGGGAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGTAAG chr4 + 94230402 33091243 33091242 33091352 33091243 33091242 33091352 110 TATAGGCAAGCTGTGCTTATTGCATTGCTGGTGAAAGTTGGTGTTATTTCTGAGAAACACACCTGGGAATGGCAGAGCGTGGAAGCTGTGGCTACAGGCCTACAGGTAGG ...........x..:x.......x...:....:........:...........:..:..:..x...........:.x:..:...........:..x..x..x......:. 110M 90/110 81.8% 110/94230402 0.0% 0/110 0.0% 114541655 75672900 +14813 chr4 + 190214555 147633756 147633755 147634376 621 TTCTCATAGGATTTTATTATCTGTATTGAGATGTTCCTCGCTGCCATTGCTCATCATTACACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGATGTCTCAGATATTAGAGATGATATTTCTGAACAAGTAAGGCATGTTGGTAAGTACCAG--CTATTTAATTCAACC---AAATAGGTTGGG---TAGGATATTGAATTTCTCCTACTAG-------GGCAATTTAT-------------TATCTATTTAG----AGATGAA-----AAAAGACTTTAAA-----------------------GCAGTACCACAGTG------CAGGCTCATC-----------------------------------AACTTTGGGGAGTGGGAGAGGGGGAAGTGGGGAGCTTATTTT-------------------------TAGAATGGTAAGTTT-------------ATAATGGT----AAAAATAACTTTT----------GACTAA----------------------------------------CAGAAAACTTTATAT-------TAA----------------------------------AGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAAAATGAACATACAAGTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGTCACTACCAAGGGTTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAAT chr4 + 94230402 33091844 33091843 33092697 33091844 33091843 33092697 854 TTGTTGCAGGATTTCATCATTTGTGTTGAAATGTTCCTAGCTGCTATTGCACATCACTACAGTTTTTCCTATAAACCTTACGTTCAAGAAGCTGAAGAAGGGTCATGCTTTGACTCCTTTCTTGCCATGTGGGATATTTCTGATATAAGGGCAGATATATCAGAACAAGTTCGAAATGTTGGTAAGTAACAAACATATTTGCATTATCTGTAAAACAGCCTACGTTCTTCTAGCTTCATTTTGTGCTGTTAGCCATCCCTACAGTTCTTTGAGAACATCCCATATCAAATTAGTGGCAGCTGCATCCTTAGAGCACTTCATAGGGCATCTTGCACTACATTCTTTGCAGTAATCCTGTGAACTAACAGTCTAGTTCTGAATTTTTCTTTCAAATAAATAGATCCTAGTGGAAATTTCAGGTGT-TCAGCTGGAATAGAGAGGAATATCTTTTACTTCTGCTCCCTTCTTTCCCTTACTGGAAAGGTATCCTTTCATTAACTGAAGATAACAATACCCAAATATAACTGTTCTAAATCAAAGACTAGACTTCCAATTTTAACATGCCTAGGCTAGCGTCTGCCTGTTCAGAGTCCTTGGTATATTGTCCTAAGCGTTAAAGTGTTATTTTTGTTTGACATCACTCTAGGAAGGACGGTCCTGGGCCAGCCAAGAAAAATGTTTTTTGCTGAGGATCATGAACAAAACGAGCATACAAGTTTACTATCCTCCTCTACTCAAGACCCAATTTCTGATGCTTCTTCAATGCCATCATCACCTATGGGTCATTACCAGGGGTTTGGACACACTGTGACACCTCTCACAACACCAACAACAGTCCCTGTAGTTGATGGAAT ..x.:::.......:..:..:...:....:........x.....:.....x.....:....xx..:..x........x..:..:........x.....:..x...........:.....................:.:..x.....x..:.xx.....x..x........xx.:x.............x..:--x.....:xx.:.x.:---...:..x:.:x.---.xxx.xx..x.x...x.x..::...-------x:..:..:x.-------------....x.x....----..x..x.-----.:.:x....:.x.-----------------------......x:x.x...------...x..x:.:-----------------------------------..x...x:..x..-xx..xx..::x..x.:...::x.x....-------------------------.:...x....xx:..-------------....:::.----...x......x..----------.....:----------------------------------------....:xx...x:...-------...----------------------------------....x....:...xx...x..x..x..:....x:..x...x.:........x..x.....:..:............:....x..x..xx.x.....:x.......::x.........x......:.x.....:........:.....:....................x..:.xx..x.....x..x....::xxx:..x:.....:... 192M2I15M3I12M3I25M7I10M13I11M4I7M5I13M23I14M6I10M35I13M1D28M25I15M13I8M4I13M10I6M40I15M7I3M34I210M 453/620 73.1% 854/94230402 0.0% 235/620 37.9% 114541912 75672643 +16474 chr4 + 190214555 147638500 147638499 147639099 600 TATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGCTTTACTGTGATGCTGACATTGCTTTTGTGATGCTGAATGCTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCACTTGAAGTATCCAACCTAATCTCTTCATCAAGGTACATATGATACCAAAATGGAATAGCAGTCAGTCTTCCAGATTTACAAACGTATACCTATGAAAATAAAGAAATTAGGAAAATATCAGAGTGCATAGAGTAGACTTAGATAAGTCTCTTTTTAGTTACTTTTAAATACAAAAATTT-----AAAATACATTTCACTAGATTTAAATCTTTAAAGTAGCTAAAAGTATGTATAAAAGTATTACCTAATTTAA-GATAATT-----ATTCTAAACAATAACAAACGAAATCATT-----TTGCATGTTGTC--------------------CTTACCTTTACTTCTCTGTTAGAGGTGTTCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGGTATACAGGGCAATGAGGATAGGTCCAAAAATACACGTATAGGTACCTAGAGAAAGTATAAAT chr4 + 94230402 33095626 33095625 33096181 33095626 33095625 33096181 556 TATATGTATAGTTTACACTGGA----TGTTCTTCACTGTTTAACTGTAATGCTAATATTGCTTTTATGGTGCTGAACATCAAGCACGAGTTCATCTCCGACCTGAACTTGGAGAGGCTTGTCAAGAACAACTGCAGCTTGTTTCCAGTGCGAGAACTCATCACATGTATTCAAACTATGCTCTTCGTCTAGATGTATGTGATACCAGAAGGGAATTGCAGTGACTTGGCCAGATTTACATATCTGTACCta-------aaaaatatt--taaaatattaG-------------------------------TTTGACCA-TTTCAATCAGAGACATTTGCAGAGAAGTAAACT---CTGCATTGAAATTTTCA-----------------------------GCCCAAGTGAACAATAATTGGGCAGTTCTAGAGAATGACAGTTAAGCGCACTTAAAATTGTATGTAATTATATACACACATACACATAACTCACCTTCACCTCTCTGCTAGCACTGTTTAACAGAGGATTCATGAGGTCTAGCCTTAGTAGTTCTGCTGGCTTACTCAAAGGTACACATGGTAACGTGTTGAGATCCAAGTAAACACGAACAGGTACCTA---AGAGTACAGAT ...x.::.:.....x..:....----..:......:..:..x.....:.....:.:.........:..:.......:::::..:..:.....x.....x.::.x...:....x:..x..:..x.:........................x...:x:...::xx.x....:...x...xx......:..x..:.::..:........:..x.....x.....x.x.:xx...........x.:x.:......-------...:.x...--x.......:..-------------------------------...::::.-...:..x:.x.:.x....-----:..:..x.:.---..:x...x....:..:.-----------------------------:..:..x.x..-:......-----:.....:.x...:...:x::.:xx..:.-----...:....x:.:--------------------..:.....:..:......:...x:x....:..xx:x...x....x.::.....:....:x.....::.......:..:.......:...x..:..:.x.xxx..:.....:x.x.....x.:.........---.:....:.:.. 22M4D225M7D9M2D11M31D8M1D18M5I10M3D17M29D11M1I7M5I28M5I12M20I131M3D11M 371/520 71.3% 556/94230402 0.0% 116/520 22.3% 114542874 75671681 +9628 chr4 + 190214555 147642784 147642783 147642958 175 TACCTGAAACTGGTTAATAAAAGGTGCTATATTTAATCCAAGAGTACGTTCTGTTCCTTGAACAGCATTCTCCTCTAGGAGTGTCTGTGATTCCACAAGCAACCCAAACATCAGCACATACTGAGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTAAGAAAAAAAGTACAT chr4 + 94230402 33096624 33096623 33096798 33096624 33096623 33096798 175 TACCTTGAACTGGTTGATAAAAGGAGCTATATTAAACCCAAGAGTTGGTTCTGTTCCTTGAACAGCACTTTCCAGTAATAAAGACTGTGATTCTACAAGCATCCCATATACCAACACATACTGTGGAAATATCTTCCCTCCACTCTGAAGTAAACATCTGTAAAATGAAAGAGAT .....x:........:........x........x..:........xx....................:.:...xx..:x.:x.x.........:.......x....x.:.:..:.........x.....x.....x......xx:..x........:..:x:...x:..:x.x.. 175M 136/175 77.7% 175/94230402 0.0% 0/175 0.0% 114546160 75668395 +3254 chr4 + 190214555 147643122 147643121 147643196 75 GATCCACAGGTGGCATGCACCTGTAGTTCCACCTACTTGGGAGGCTGAGGCAGGAGGACTGCTTGAATCCAAGAG chr4 + 94230402 76033193 76033192 76033264 76033193 76033192 76033264 72 GATACACAG-TGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x.....-...--.....x..........x.......::........x.xx.x.:.x::......:...::.. 9M1D3M2D60M 56/72 77.8% 72/94230402 0.0% 3/72 4.2% 71609929 NA +3305 chr4 + 190214555 147643856 147643855 147643934 79 GTGGTGCACACCTGTAGTCCCAGCTACTCAACAGGCTGAGATGGGAGGATCGCTTGAGCCCAGGAGGTCCACATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........::.x........x:xx.x.:.x.:.....:.....:..x.:::x::..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 71610655 NA +3360 chr4 + 190214555 147653310 147653309 147653384 75 GGTGTGCCTGTAATCCTAGCTACTTGGGAAGCTGAGGCAGGAGAATCGTTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::.x....:.:.:.........::.:......x.xx.x...x.::..........:..x:xx:..:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 71620107 NA +29361 chr4 + 190214555 147653840 147653839 147654569 730 TTTGTGTTTTACCTGGATATTGCAGCTTTTTCCATTATTTCCTGCTGAATGAGCCCAGATGGCTCAATGACATCCAATATAATTATGCTCCATAACTTGTCTGATTTTGGCCTTTGTAACATAGCAGATTCATCCTCCACATGTCTCAGCCAAAACTCAAGTGTTTCTTTAGGAAAGTGATTGGCTTCAGATATGAGGTCCAGAGCAATACGATGCTGGTCTTTCTCCACAGAACTGTATGGTTTAACCTGCCCAAGTGTGCCAGCAATAACAGGCAGAACAGAGAAGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAG---TATTACTCTGTCCAGTTCCAGAGCTCATCTCATT---CTGACAGTGAGTATCCATGGTCTGATACAGTTTCTCTGGAGTCAGTGAAGACAAAACTTTGCTCATTGCCATTTTAAAGCCTTCATGATATGGGATGTTGTTAAGCAAAGCAATTTCTGTAGATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTG---GTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCTAACGATAACAAGTCTTTATTCTGGGTAAAACTTTTTGCAACATCCATTTCACATTCCAAACCCAAGACACTAATACTCTGGATTCTTAAGTAACAGTCTTGACAAGATACTTCCATCATCACATGGTCTCCAGGCTTTATCCAGTAGTCTT chr4 + 94230402 33097472 33097471 33098198 33097472 33097471 33098198 727 TTTGTACTGTACCTGGATATTGCAGCCTTTTCCATCACCTCCTGCTGGATTAAACCAGATGTCTCTATAACATCCAAAATAATAATACTCCATAATTTATCGGATTTGGGTCTCTGTAGCACCACATTTTCATCTTCTAAGTGGCTGAGCCAAAACTCTAGAGTTTCCTTCGGGAAATTATTAGCTTCTGAAATTACATTAAGGACTGCCTGATGCTGTTCTTTCTCAATAGAGCTGTAGGCTTTAACTGGTCCAAGTTTGCCAGCTATAATTGGTAGGATGGAGAAGCCTTCAGATACATCTAGTACGTACAAAGGATCAGGAACCACATCTAAAGAGCTCTTGTTCTGGCTTTCTTGGATGTTCACCCCACTGCCATGTCTATCAATATCCATGGACTCCAAGTCCTTACTTGGATTTAATGATGACAGAACCTTGCCCATGGCAGCTCTGAAGCATTCGTGGTACGGTACATTGTTCAGCAGGGCTATTTCTGTGGATTCCAACACACATACTTGACCTTTGCCATCCTGTTCGCTAGTCGTCTGAAGACTAGCCAGAGCATTACATAATTCAGCCTCATTGCCCAAACCCAGCATGTCAT--CTCTG--------TCACTGCA--GTCCATCCCACACTCTGAAGTTAAAAAAGAAATCTTCTGGATCTTCAGGTAGCAGTCTTGGCAGCAAACTTCCATCATCACAGTATCTCCAGCCTTCACAGAATAATCTT .....::.x.................:........:.::........:..x.:x.......x...x..:........x.....x..:........:..:..x.....x..:..:....:..:x:..xx......:..:.x:..x..x...........x..x.....:..x..:..:.x...:.....x..x..x.x:.:x..::.x::x:.......x........x.:...:.....x.x......:x.:......x.......x....:x..:..:.::...........:..:.......::.....x.....x...:.:.:xx:x.x..x..---.x..::....x.:xx:.:x::x.:...:.:..:.---x..x.x:.x.:.........x..xxx.xxx:..x::....x.:.:...x....:...:....:...x..x::.:.:....x...:..:..:..x.::.....x....::..x........:........:.:....:::..x:..x::x....:x...::..:---........::....x..:...:....x.:............x..:..xxx:.:..x...x.--:....--------.:x:....--:.....::....:..::..x::..:.x.xx...x:.......::.:.:...:........:..:x.x...............xx:.......x...:.:xx.:..:.... 337M3I34M3I163M3I61M2D5M8D8M2D110M 500/718 69.6% 727/94230402 0.0% 21/718 2.9% 114556368 75658187 +3125 chr4 + 190214555 147656763 147656762 147656823 61 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAGAAATGAGGTCT chr4 + 94230402 76607305 76607304 76607365 76607305 76607304 76607365 61 CTCTGCCTCAAAAATAAAATAGAAAAAAAAAAAGAGGGAGGAGGGTTGAGAAAGGAAGTCT .....:........x....x.:.............::..::::::xx:.....x..:.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 71049458 NA +3047 chr4 + 190214555 147656780 147656779 147656832 53 AAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAGAAATGAGGTCTTGCTATGTT chr4 + 94230402 14052222 14052221 14052274 14052222 14052221 14052274 53 AAAAGAAACAAAAAATGAAAGAAAGATTAACAGAAATAAATTCTTGGTATGTT ....:...x......x..........xx..x......:.:x.....x...... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 133604558 56609997 +3544 chr4 + 190214555 147657523 147657522 147657596 74 TTAAAAAAAAAAAAAGAAAAAAGAAAAATCAGAGCTGAAGAAATAATGATAGGTTTTTCAAATGCTATGCAACA chr4 + 94230402 72184801 72184800 72184872 72184801 72184800 72184872 72 TTAAAGAAAAAAAAAAAAAGAAGAAAAATTAGAACCAAGGAAATAATG--AAGTTCAGCAACAATCTTGCAACA .....:.........:...:.........:...:.::.:.........--.:...:xx...xx:::x....... 48M2D24M 54/72 75.0% 72/94230402 0.0% 2/72 2.8% 75472722 NA +11579 chr4 + 190214555 147657771 147657770 147658003 233 AAAAAAATGGACAAGACCTACCTGCAAGGTCCTGTACGGGGTAGACAGCCTGTTCCCAACATGTTTCCTCACTAGGACTTGTGGATAAACTATGTTCATCATCAAGCTGGAGCACAAACCAAACCATAATAGCATCTAGTATGCCTTCTTTAATAACAGGAATACCAATCTTATCAGGCTTTTTAGTTGCAAGACTTTTTAATTCCTGAGAAAAATGTAGAAGGAATGAAACG chr4 + 94230402 33099454 33099453 33099686 33099454 33099453 33099686 233 AAGAAAATCTACACTGCTTACCAGGGAGGCCTTGCACAGGATAGACTGCCTGTTCCCAGCAAGTTTCTTCACTGGGACTCGTAGATAGAGCATGCTCATCATCAAGCTGCAGTACAAACCATACCACAATAGCATCTAGCATTCCTCCTTCAATGACTGGCTGGCTGAGCTTCCAGGACTTTCTATGTGCAAAGCTCTTCAGCTCCTGACCAGAGTGGAAAAAGAAAGAAGCG ..:.....xx...xx:.:....x.x:...:.:..:..:..:.....x...........:..x.....:.....:.....:..:....:.x:...:..............x..:........x....:............:..x...:...:...:..x..xxx:.::.x...x:x:.:....:..xx.....::..:..:.::......xx.:.:..x.:..:...x...:.. 233M 167/233 71.7% 233/94230402 0.0% 0/233 0.0% 114558317 75656238 +3220 chr4 + 190214555 147659039 147659038 147659121 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........:.::........x.xx.x...xx:.x.......:....x.xx:.x:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 71625842 NA +10735 chr4 + 190214555 147660841 147660840 147661149 309 TTCACCTGAAGGTTGTTGAAATCTACTGTCATAATTTCAAAGCACTCTGTCAAAGCCAAATATCCTCCAGGAACTCGACTCATCTTTTCAGTTGTATAAGGTTCAATTGTTTCTTCAGTATCTACAGAAGAATAAGCCGGACTCTGAAATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTGGAGAGAGAGAAAATAGGGGAGGGGTAGGAAGATGGAT--TTTTTTAGAATCAAGTAACATATCTAATACTGAGTCCAGAAAAAAATACAAAAATGAAATAAAACCTCATG chr4 + 94230402 33102123 33102122 33102419 33102123 33102122 33102419 297 TTTACCTGCAGATTGTTGAAATCCACTGTCATTATTTGAAAGGGCTCTGTCAGAGGTACATAACCTCCAGGAATTCGACTGAGCTTCTCAGTGGTGTAAGGTTCGACAGTTTCCTCTGAACCAGCGAAAGCATATGTTGGACTAAAGAACTTCACAGAATGTGGCAAGTGTACACCAGCAACTTCTTGTGCTCCCACTCTGGGGGGAGAGGAA--GAGGAAGGAGAATGAAACTTGATAATCCTTTCAAGACTGGCTAAGTGTTTCAAACGCAGTGC----------ACAAGAATTAA--AAGACCCCATG ..:.....x..:...........:........x....x....x:........:..x:.x...x..........:......x.x...:.....x..:........:.:x.....:..x.x.:.x:.::...x...x.::.....xx::..:......xxxxx......:..x.:........:x..:.xx::x..........:.:.....:..--::..:...:.x.x...:x.x...--.::...x:.:x.x:.:x.x:.:.:.x.x..xx...x.----------....:...x..--..:...:.... 213M2D23M2I37M10D11M2D11M 205/295 69.5% 297/94230402 0.0% 16/295 5.4% 114558718 75655837 +3136 chr4 + 190214555 147661661 147661660 147661719 59 GCGCCTGTAGTTCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGCAGTGAACCCGGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x..................:.........x.xx.x...xxxxx.......:.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 71628455 NA +3277 chr4 + 190214555 147664989 147664988 147665063 75 GGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACATGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::::.x....:.:...........::........x.xx.x...x.........x::.:..x.xx:..:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 71631786 NA +6054 chr4 + 190214555 147668530 147668529 147668667 138 TACACTTACCTATGATGTCTTCTTATCTCTGCACATTCTACTGCCATCCCAAATATAACAGCACTTGCTGGTATAACTTTCCCATACTTTTCACAATTAGCACTTTCACCTTTGGTCTAAAAAAAATAACAATAAGAA chr4 + 94230402 33104529 33104528 33104662 33104529 33104528 33104662 134 TAAACATACCTGTGATGTCTACGTATCTCTTTGCATTCCACTGCCATTCCAAATACTATAGCACTTGCAGGAATAACTTGCCCATAGTCTTTAGTATTGACATCTTGATTTTTTGGCT----GTAACATTAATAGGAA ..x..x.....:........x.x.......x::.....:........:.......:x.:.........x..x.......x......x.:..:.xx...::..::..x.::...x.x..----:x..:.x:....:... 118M4D16M 98/134 73.1% 134/94230402 0.0% 4/134 3.0% 114564001 75650554 +3847 chr4 + 190214555 147668946 147668945 147669028 83 CGTGGTGGCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::.:..--......:...........::........x.xx.x...x.:...........:..x:xx:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 71635749 NA +8682 chr4 + 190214555 147670630 147670629 147670748 119 ATACTGCTTACCTTTGGCTGTAAAAGTAAATGCTCCCATGCATGAATCAAACTCTCCACAATTCCTTCTCCAAATAAACCTGCATCGACAGTTTCTGTTACAACTAGGGACACTCTATA chr4 + 94230402 33105102 33105101 33105220 33105102 33105101 33105220 119 ACATCACCTACCTTTGGCTGTAAAAGTAGATGTTCCCAAGCATGTATCAAGCTCTCCACAATCCCTTCTCCAAATAAACCAGCATCAACAGTTTCTGTGACAACTAAGGAAACTCTACA .:.:::.:....................:...:.....x.....x.....:...........:.................x.....:...........x.......:...x......:. 119M 102/119 85.7% 119/94230402 0.0% 0/119 0.0% 114565528 75649027 +22094 chr4 + 190214555 147672913 147672912 147673924 1012 AAAAATAGAGAAGTATAAACACTAAAATTAGTTTACATGATAAT----------ACCTTTCGGGAATATGTTTTGGAATCTCTATGTCAAGTGACTTCGTATGTAAGAGTTTGATCCCTGCTTCCATCTTGTTTGCTGCCACGACATCACAGGCAAGTTCATACATGGTCTTGGATAACTCACAGGCATACACGGAATGTGCTCCAGCTTTTTTAGCAAACATGCTACAAGGGAAAAA----AGTTCTC----------------CATCAAGAAAAAATAATCTACTGTATTTTCTCAAATTTTAAGGAAATG---------ATGATGCTAAAATGTGGGGTTTTTC---------------------CTTTTATTCTTTAACACA------ACCATTACTCACTCTGCATTAAAAAATAAACTAATATTCTTGTCTAGAAACAAAT-------------------------CATACAATAAAC-----------CATGGGAT----CTACTCTATTAAAGACACAACTGGCATT---GTATCTTTAATGAATACTAATGGGC-TTTAACTTAGACAACTAGATTCCATCAGAATGT--TAACATAAAAAAGA---CTCAAATTCATTATTCAAAATTTCAATAATCCCAAATTT---TTCTTAGCAGTTATGTCCAGTTCTTGATAAAAGTTATAGTAAAAAACATAATAG------------TTACATAAATA-------------ACCCTAAC---AAGATTATAAGAAATACTTTTAAA--------TTCCAATGTTAAATTTTCCAT--ATCTGGCAAAA------------TCTTTAATTTACATTAG-------------AATACATGTATATACCATTAAAATGCAA---------TTACTACCAACCTTAGTATTCCAGTTCCTGCTCCAATGTCCAAAACACTTTTGGACCCCAAACAAACTGCCTTTTGGATTGCTGCATTATAAATTGTATTCCTCTTGGTGTCATTAAGCATGATAAAGTGCCAGCGTTCCACCAACCAGTTTGCAACACGATAAAAATTCTCCTTTGCATCACTGAAATCAGGGTTTAGCTTCACTGCTTTATGAAAATACCCAGCTGCTTCATCCCTAAAGCCCATTCTAGAGTAAAAAATGACA---AAAGACAAA--ATATATTCAACTATATGCTACCA chr4 + 94230402 33106942 33106941 33108125 33106942 33106941 33108125 1184 AAACTTAAATTAGAAGAAAAATTAAAATGTTATTACAGTAGAATGCAACAACTCACCTTTCCGGTATATGCTTTGGAATTTCTATATCAAGCGACTTCAAATGTAGAAGCTTGATATCTCTGTCCATGTTATTTGCTGCCACCACATCACAGGCAAGTTCATACATGGTTTTCGACAATTCACAGGCAAAGACAGAAGATGCTCCTGCCTTCTTTGCAAACATACTGAAATACAAGAATCAGAGCTTTCACCGTCCTATTTATATCATTTTAGGTAAAGGATGtgtcgtagtt-ctgtgatttttggttattggtattccacatcataacacaatactgagtcttttgaagttCTGTTTATGCATCTGCTTTTAATTTCTAAGAAACTGCCTAAAATTTGTCATTGAATATATAAATTTTCATTAACTTCCCTGCACAAACACTAACACTGCACAAACTGACATGCTGTCGACATGCTATGACCAACAAGGATCGCAGGAGATTCCCCAACTATACTAAATCCACTCATTACAGTACAGTGTTTTCATTCACTAACATTTTCCACTTAATTTAAGTGATTA---CCAACTAGTACACAATAGCTTAGGACAGAATACTTGACATTAAGACTCCAAA----AGCAATACGAATTCTCCATTTTATACAGT-------AGTTCCTGGTATAAA----AAGAAAACACGCACTAAGATGAAAATTGCTCCCACAGATACAACTGGGATTGAGCACTAACCTCAAGACT----GACCAACTTTTGAAAGTCTCGTTTCCTTGCTTAAGTTTTGCCTCAACAAGGCACAAATGTAAAATAATTTTTTAAGTAGCACTAACATTTTGTTAGACAACAAATGTTTCTAATAATTAAATGTTAAACACATGCTTATGACACACCTCAATATTCCTGTTCCTGTTCCAATATCGAGGACAGACTTGCACCCCGAACAGACAGCATTCTCTATTGCTTTTAGGTAAGTAAGATTCCTCTTGGCATCGTTAAGCATGATGAAGTGCCAACGTTCCACAAGCCAGTTTGCCACACGGTAGAAATTCTCCTTTGCATCAGCAAAATCTGGGTTAAGCTTCACTGCTTTGTGAAAATACCCAGCTGCTTCATCTCTAAAGCCCATTCTAATGGTAAAAACAACAAACAAATATAAAGCATACATTCAGATGTCAATTATCA ...xx..:.xx..x.x...x.:......xxxx.....xx.x...----------.......x..x.....:........:.....:.....:......:x.....::..:.....x:..x:x.....x..:...........x..........................:..x..:..:.........x.x..:...x:......x..:..:..x........:..:x..x:x..:..----..:.:..----------------...:xx:::x...x:..x.:::...x..-..xx:.....x:.xx.x..---------..x..:x:.x...::x.:..:...:---------------------......x.:.:...x.x.------.xx...xx...:.xx::..xx...xx.xx.:...:x.:.:..:x:.:.x..x..:-------------------------...:.x..:.x.-----------..x.:...----.x...x..:....xx...xxx.x:..x.---..:.:..:.x.x.x..x:.x.xxx.-:....:...::::.:..---:.x.::..x.:::--..:.x..::.x...---..::.xx.:.xx.:..x...----.::...x.x..x.:.---..:.xx:....-------.....:..:..x..:----.:x....x..::.x..:------------.:x..:.:...-------------:.x.....---....:.----..xxx......:..--------....xxxx....:....x.x.--.:xx....x..------------.:.....x.x:..:..:-------------..:.x....x.x..x:.x.x.....:x.---------...:x..xx....:.:......x.......:......:..x.::...xx:...x.....:....:..x..x..:.xx......x:xxx:...:.x:x...........::..:...........:........:........x.:.........x.....:..:..................x::.....x.....x..............:.......................:...............:x.xx.....::...---...x.:...--...:.....:x.:.xx::..:.. 44M10I184M4I7M16I28M1D19M9I25M21I18M6I55M25I12M11I8M4I28M3I25M1I17M3D13M2I14M3I20M4D15M3I11M7D15M4D17M12I11M13I8M3I6M4D14M8I21M2I11M12I17M13I28M9I266M3I9M2I23M 683/989 69.1% 1184/94230402 0.0% 218/989 22.0% 114565971 75648584 +3051 chr4 + 190214555 147679619 147679618 147679677 59 GCGCCTGTAATGCCAGCTTCTCAGGAGGCTGAGGAACGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x....:.x......x..::::........xxx:.x...x................ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71646413 NA +8867 chr4 + 190214555 147680290 147680289 147680486 197 TTCTTAACAAGTAATACTAAAATC----------------------------ACTACAAACCTGAAGAGATGCTCCCCCATACTATTGCAAATCACTTCATCATCAGGAAACAGTTCCAAGGCCTGCTCATAGCAACCAAGTAAGTCTTGTATCCGACTGAGAGCATCAAGCTCTTCAGCCCATCTGAAAAGTGTGTACTGAAAAGTTTCCTTTACAAATAAGAA chr4 + 94230402 33109279 33109278 33109501 33109279 33109278 33109501 223 TTCTTAACATACAATACTAAAAACCAAATCTTATAAAACCTGAGTATAGACTACTACAAACCTGAAAAGATGTTCTCCCATACTGTTACATATGACTTCATCATTTGGATACAACTCAAGTGCCTGTTCATAACAGTTAAATAGATCTTGAATTCGTGCTAAAGAATCCAGCTCTTCTGCCCATTTAAAGAGAGTAAACTGGAATGTTTCC--TACAAAACAAAA .........x::..........x.----------------------------..............:.....:..:........:..:..x..x..........:x...x...::..x.:x.....:.....:..:::..:..::.....x..:..xx:x.:..x...x........x......:.:..:..x..:x....:..x......--......xx.:.. 24M28I159M2D12M 147/195 75.4% 223/94230402 0.0% 30/195 15.4% 114571011 75643544 +3089 chr4 + 190214555 147687667 147687666 147687749 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::........x.xx.x...xx::x.......:.:..x.xx:.x:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 71654470 NA +3004 chr4 + 190214555 147689775 147689774 147689839 65 GGACACAAACTATCCTGTGTTTATAAATGTGGAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 69007352 69007351 69007416 69007352 69007351 69007416 65 GAACAGATACCCTCAAATGCTTTTACCTGTACAAGTCCTCTTTTTTTTTTTCTTTTTTTTTTCTG .:...x.x..:x..xx:..:..x..xx...:x....:..:...........:..........:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 78682423 NA +3605 chr4 + 190214555 147690804 147690803 147690875 72 GCACCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCACAATAATCACTTGAACCTGGGAGGTGGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........x:........x.x::xx..x..........::.:..x.xx:..:..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 71657598 NA +3832 chr4 + 190214555 147699750 147699749 147699809 60 TGCGTCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGGGAATCACTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::x......:...........:.........x.xx.x...x.............:.. 60M 49/60 81.7% 60/94230402 0.0% 0/60 0.0% 71666545 NA +3347 chr4 + 190214555 147706319 147706318 147706396 78 TGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......:.--....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 9M2D67M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 71673117 NA +3756 chr4 + 190214555 147709432 147709431 147709520 89 ATGGGGCCTGGTGGCGCGTGCCTGTAATTCCAGCTATTTGGGAGGTTGAGGCTCGAGAAGCATTTGAACCCTGGAGGCAGAGGCTGTGG chr4 + 94230402 76033191 76033190 76033277 76033191 76033190 76033277 87 ATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x:.x::....:..::.--....:.........:...::...:....x.::.x......:........x.:..x:xx:......:. 20M2D67M 60/87 69.0% 87/94230402 0.0% 2/87 2.3% 71676241 NA +3013 chr4 + 190214555 147719182 147719181 147719224 43 CATGGTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 49609051 49609050 49609093 49609051 49609050 49609093 43 CACAGTCTCTCTCTCTCTCTCTCTTTTTTTTTTAATTATAAGA ..::.............................xx..x.:... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 98110131 92104424 +3153 chr4 + 190214555 147719184 147719183 147719218 35 TGGTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 + 94230402 17384410 17384409 17384444 17384410 17384409 17384444 35 TGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ....................:.............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 130334774 59879781 +3084 chr4 + 190214555 147719187 147719186 147719219 33 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554024 6554023 6554056 6554024 6554023 6554056 33 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 141165163 49049392 +3084 chr4 + 190214555 147719189 147719188 147719221 33 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTG chr4 + 94230402 17384413 17384412 17384445 17384413 17384412 17384445 33 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTG ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 130334776 59879779 +3333 chr4 + 190214555 147722141 147722140 147722206 66 GTGGCACATGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::..:.--....:.............::........x.xx.x...x.........:::.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 71688940 NA +13155 chr4 + 190214555 147732021 147732020 147732480 460 CTGCCGCGCGGGGGCCGGGCG----GGGCGGGGCCGC------GGGCGCTCAGAGCTCGGCGG--GGGCTGCCGGGATTGGGGCGCCGCAGCTAGCGCTGGTCTCGGTGGCAGCTCCTCCGCGCCGCAGGACTCGGCTCTACGGGACATGTCCGTGCCGCGCTCGCCGCGCGCCCGGGCCTGCTAGCTCCTCTGTGCTCCCTGAACGCGCGGCGCCGCACCTGGCAGCGGCCTCGGAGCTCGGCTCGGGCAGGAGCGCGCGGCCGTGCGCACCGCGCAGCGACCGCTGCCGTCATGGGGCTGCAGCCCCTGGAGTTCAGCGACTGCTACCTCGACAGCCCGTGGTTCCGGGAGAGGATCCGCGCTCACGAAGCGGAACTCGAGAGGACCAACAAGTTCATCAAAGAGCTCATTAAGGACGGGAAGAACCTCATCGCTGCGACGAAAAGTAAGCGGGGACGCGGGCGCGGACG chr4 + 94230402 33114908 33114907 33115287 33114908 33114907 33115287 380 CCGCGGCGCTGCCGCCCGGCGCTGAGAGGCGGGCCGCCTGTTcggccgggcggggcccggcggcggggctgccgggagcgggccgccTC---------------CCGTGCCCACCCCTGCGCTCT-------------------------------TTGTGGCCGCCGTGCAGCCGGGCGCG--------------------GGGCGCGCG---------CTGATCGCAGC---GGAGGTCGCTGTGAGGAGGGGCGCGCGGCGCGGTGCA--GCGCAGC------------CATGGGGCTGCAGCCTCTGGAGTTCAGCGACTGCTACCTGGACAGCCCCTGGTTCAGGGAGCGGGTGCGAGCCCACGAGGCCGAGCTGGAGAGGACCAATAAGTTTATCAAGGATTTGCTTAAGGACGGGAAAAACCTGATCGCCGCCACCAAAAGTGAGTGAGGAGGGCGGGGGGGACG .:..x....x.xx...x....----.:.xx.......------..x..xx.:.:..:......--............x:...x....x.---------------.x...x.x:.:...x...x.:-------------------------------::.:.x:.....:..:x......x:.--------------------.::......---------...::x..:..---....x...x:x:.:.x...:.........xxx.:...--.......------------...............:.......................x........x......x.....x..:.x..x..:.....:..x..:..x...........:.....:.....:..x:.xx.............:.....x.....:..x..x......:..:.:...x.xx..x.x..... 21M4I12M6I20M2I24M15D21M31D26M20D9M9D11M3D37M2D7M12D180M 280/368 76.1% 380/94230402 0.0% 104/368 28.3% 114617113 75597442 +3067 chr4 + 190214555 147738424 147738423 147738482 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGGACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x..:......:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71705218 NA +3515 chr4 + 190214555 147743428 147743427 147743494 67 GACCTTGGGCAAGTTGTTTAACTTCTCTGTGCCTTGATTTCCTCCTCTGTAAAATGTGGATAATAGT chr4 + 94230402 83501141 83501140 83501207 83501141 83501140 83501207 67 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGT ...::.......:..::.....:.x.x.......:::...:.:.x:..........x:.x.:..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 64242287 NA +3222 chr4 + 190214555 147748831 147748830 147748901 71 CACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAATCCGGGAGATTGATGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.:.........::........x:xx.x.:.x::......:..:.:..x..x:x....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 71715624 NA +3381 chr4 + 190214555 147766552 147766551 147766643 92 GTGGGTGTGTGTGGGTGTGTGTGTATATATACACATACATATATGTATGTGTGTATATGTGTATGTATACACATATATATACGTATATACAC chr4 + 94230402 79265519 79265518 79265609 79265519 79265518 79265609 91 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCAC ...x.........x:........xx.:....:.......::.:..:.:::.::x.:..:.x.:...x:...-.:.:x.x..::..x..:... 71M1D20M 60/91 65.9% 91/94230402 0.0% 1/91 1.1% 68501033 NA +3109 chr4 + 190214555 147766567 147766566 147766629 63 TGTGTGTGTATATATACACAT--ACATATATGTATGTGTGTATATGTGTATGTATACACATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx.:.......x.--..x..x..:.:.......:.......:....:::........ 21M2I42M 48/63 76.2% 65/94230402 0.0% 2/63 3.2% 120441075 69773480 +3168 chr4 + 190214555 147766793 147766792 147766862 70 TATTCACATATATATATATATATATATATATATATATATATATATATTTATTTATTTATTTATTTATTTT chr4 + 94230402 65285586 65285585 65285655 65285586 65285585 65285655 70 TATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCTACTCATCTT ....:.........:....x.........x.:.:.:.x....x.xxx.....xx...x.:..:.:..:.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 82481207 NA +3591 chr4 + 190214555 147770385 147770384 147770454 70 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......x:..--....:.:...........::........x.x..x...x::.........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 71737188 NA +3806 chr4 + 190214555 147781214 147781213 147781286 73 TGTGCCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGGGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:.........::.:........x.xx.x...x...........:.:..x.xx...:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 71748009 NA +4284 chr4 + 190214555 147784767 147784766 147784933 167 TATAAATATAATATATTATAAAATATATATTATAAATATAATATATTATAAAATATATATTATAAATATATTATAAAATATATATTATAAATATATTATAAAATATATA--TTATAA-ATATATTATAAAATATATATTATAAATATAATATATTATAAAATATATGTTA chr4 + 94230402 73633775 73633774 73633935 73633775 73633774 73633935 161 TAGAGATATAAGACAACATCAAATAT------TAAACTTT-TAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaaattattaaatat-tatttCACGT-TATAATGTTATGATATACATGGTA ..x.:......x.:.x:..x......------....:x.x-..x...:..xxx......x:..xx.:........x.............x..:.x:......:...x.:--......-.:.x.....x......-....x:.x:.-..xx..:....:.x...:...x.. 26M6D8M1D68M2I6M1I16M1D10M1D24M 116/158 73.4% 161/94230402 0.0% 12/158 7.6% 74150992 NA +4774 chr4 + 190214555 147784791 147784790 147784994 204 ATATATTATAAATATAATATATTATAAAATATATATTATAAA----TATATTATAAAATATATATTATAAATATATTATAAAATATATATTATAAATATATTATAAAATATATATTATA-AATATAATATATTATAAAATATATGTTATAAAATATAAAACATGTTATAAAATATATTATGAAATATGTTATATTTTAAAATATATATT chr4 + 94230402 73633769 73633768 73633963 73633769 73633768 73633963 195 ACATTGTAGAGATATAAGACAACATCAAATAT------TAAACTTTTAAATTGTACTTTATATAACATCTACATATTATACAATATATATTATATATGTTCTATAAAGTATCTGttttataatacaa---attattaaatat-tatttCACGTTATA----ATGTTATGATATACATGGTAATTAACATTTGACTTAGAAATATTTTTT .:..xx..x.:......x.:.x:..x......------....----..x...:..xxx......x:..xx.:........x.............x..:.x:......:...x.:..x..-....:..---.....x......-.:..x:.x:x....----.......:.x...:..x:.:.xxx.::..xx.:..x:......x.x.. 32M6D4M4I73M1I7M3D12M1D14M4D48M 135/190 71.1% 195/94230402 0.0% 19/190 10.0% 74151022 NA +3538 chr4 + 190214555 147793133 147793132 147793219 87 CTCTGGAAAAAAAGAAAATGTGTGTGTATGTATGTGTGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATATATGT chr4 + 94230402 86633904 86633903 86633990 86633904 86633903 86633990 87 CTCCAGGAAAAGACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...::.:....:.x...:x:..x.:..::..::..:x..:.:...x..:...:...:......:.:.::..x...:..:..x.:.:. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 61159229 NA +3231 chr4 + 190214555 147793150 147793149 147793215 66 ATGTGTGTGTATGTATGTGTGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATAT chr4 + 94230402 5214258 5214257 5214321 5214258 5214257 5214321 64 ATCTACGTGTATGCATTTGCATGTGTGTGCGC--AAACGTGTGTGTGCATGCAGATGTGTGCACAT ..x.::.......:..x..::........:..--.x.:.........::..:.x.......:.:.. 32M2D32M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 142578892 47635663 +3110 chr4 + 190214555 147793155 147793154 147793230 76 TGTGTATGTATGTGTGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x...:.............:.xx..:..x.::.:::.:...:x...::...x...::.:::...:.::::.. 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 61958614 NA +3545 chr4 + 190214555 147793168 147793167 147793269 102 GTGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTG-----------TGTATATATATGTATGGTAGGTGTTTCAGTTCACAAA chr4 + 94230402 79265519 79265518 79265631 79265519 79265518 79265631 113 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAA ................:.:....xx...:.:.::...:::....::.:.:.:.x.:..:.x....-----------.x......x...:.:xx.:xx.x...x...x:..... 65M11I37M 69/102 67.6% 113/94230402 0.0% 11/102 10.8% 68527649 NA +3086 chr4 + 190214555 147793169 147793168 147793235 67 TGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTGTGT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:...:....:..x:.:.:...x...:.::..::...........::.x.:....::.x...:. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 61159245 NA +3087 chr4 + 190214555 147793188 147793187 147793376 189 GTGTGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTGTGTATATATATGTATGGTAGGTGTTTCAGTTCACAAAATACTTAGCAATATTGGGGTAAAATATAACACACACATATATATATATATATTTTTTTTTTTT-----TACAAATGTA-----------------CAGTTGTGATTATAAATTCTGGAAAGAATACCCA chr4 + 94230402 79265519 79265518 79265685 79265519 79265518 79265685 167 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA---------TTTGTGTCCACA----------------------------------ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATT-TATGAGTAATATCCA .............:..:......xx.:...:..:...:::.....:::.:::.x.::..---------...xx..:....----------------------------------....x.x......x..::.:...x::.....-----........:.-----------------..x....:x.....x...-.:x:.:x....:... 59M9D12M34D31M5I10M17I18M1D15M 103/145 71.0% 167/94230402 0.0% 66/145 45.5% 68527669 NA +3676 chr4 + 190214555 147798729 147798728 147798814 86 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA-TATATATATA-TATATAT chr4 + 94230402 4618339 4618338 4618426 4618339 4618338 4618426 88 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT ..x.:.:...:...:x:x.::.x.......::..............x:..x.x:......x.x......-....x.....-....... 69M1I10M1I7M 65/86 75.6% 88/94230402 0.0% 2/86 2.3% 143180390 47034165 +3770 chr4 + 190214555 147798731 147798730 147798816 86 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA-TATATATATA-TATATAT chr4 + 94230402 4618339 4618338 4618426 4618339 4618338 4618426 88 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT ..x.:.:...:...:x:x.::.x.......::..............x:..x.::......x.x......-....x.....-....... 69M1I10M1I7M 65/86 75.6% 88/94230402 0.0% 2/86 2.3% 143180392 47034163 +3884 chr4 + 190214555 147798733 147798732 147798817 85 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATA-TATATA chr4 + 94230402 4618339 4618338 4618425 4618339 4618338 4618425 87 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATA ..x.:.:...:...:x:x.::.x.......::..............x:....::......x.x......-....x.....-...... 69M1I10M1I6M 65/85 76.5% 87/94230402 0.0% 2/85 2.4% 143180394 47034161 +3645 chr4 + 190214555 147798735 147798734 147798814 80 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:...:x:x.::.x.......::..............x:x...::......x.x......-....x...... 69M1I11M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 143180396 47034159 +3739 chr4 + 190214555 147798737 147798736 147798816 80 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618339 4618338 4618419 4618339 4618338 4618419 81 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT ..x.:.:...:...:x:x.::.x.......::..............::x...::......x.x......-....x...... 69M1I11M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 143180398 47034157 +3434 chr4 + 190214555 147798739 147798738 147798817 79 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATA-TATATATATA chr4 + 94230402 4618339 4618338 4618418 4618339 4618338 4618418 80 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ..x.:.:...:...:x:x.::.x.......::............x.::x...::......x.x......-....x..... 69M1I10M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% 143180400 47034155 +3134 chr4 + 190214555 147798756 147798755 147798822 67 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAGACTT chr4 + 94230402 60831530 60831529 60831596 60831530 60831529 60831596 67 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x...x.:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 86967226 NA +3156 chr4 + 190214555 147798758 147798757 147798824 67 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAGACTTTT chr4 + 94230402 60831530 60831529 60831596 60831530 60831529 60831596 67 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x..x.x..x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 86967228 NA +3115 chr4 + 190214555 147798760 147798759 147798819 60 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATAGA chr4 + 94230402 60831530 60831529 60831589 60831530 60831529 60831589 60 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAA ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x.x..:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 86967230 NA +11238 chr4 + 190214555 147822705 147822704 147822969 265 ATCATTATACTTTTCTTTCTAGGTCTGTCAGTGGCCCAGCGGAAGTTTGCTCATTCACTCAGAGACTTTAAGTTTGAGTTTATCGGTGATGCTGTGACAGATGATGAACGATGCATAGGTAATTAAAC----ATGATATTTTGGTTTGTTTTCCTTTGCCATG----GCCACCAAATAATCACTCCTTTCTTC----------TTACAGATGCTTCCTTACGTGAATTTTCAAATTTTTTGAAGAATCTGGAGGAACAGAGAGAAATTATGGTGAGTTGAGAG chr4 + 94230402 33150539 33150538 33150818 33150539 33150538 33150818 280 ATCCTTGCTTTTTTCTTTGCAGACCTTTCAGCAGCCCAGAGAAAATTTGCCCATTCTCTGAGAGACTTCAAATTCGAATTCATTGGTGATGCAGAGACAGATGATGAAAGATACATAGGTAGGTAAGAAGTGATTATAAATGGCTATGGTT---TTTGCCATGCCATTCTGCAACATGATGAAACTTGTTTTCTGGTTTTGTATTGTAGATGCTTCTCTTCATGAGTTTTCAAACTTCTTAAAAAATTTGGAAGAGCAAAGAGAAATTTTGGTGAGTTGCAAG ...x..::x:........x:..::..x....::......x.:..:.....:.....x..x........:..:..:..:..:..:........x.x.............x...:........:x...:x----..x...xx.x.x.x..x..---.........----x.::.x.x..:..x.xx.:.x.:...----------..::.........::.x.:...:........:..:..:..:...:....:..:..:.........x..........x:.. 128M4I19M3D9M4I26M10I80M 193/262 73.7% 280/94230402 0.0% 21/262 8.0% 114672166 75542389 +3293 chr4 + 190214555 147824192 147824191 147824264 73 TGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCTTGAATCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:.::........x.xx.x...x::......:.::.:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 71790987 NA +3499 chr4 + 190214555 147825318 147825317 147825389 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAGTTGAGCCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x..x....:...:.:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 71792112 NA +3372 chr4 + 190214555 147834340 147834339 147834412 73 GCATCTGTAGGCCCAGCTACTTGGGAGGCTGAGGTGCGAGGATTGCTTGAGCCTGGGAGGTTGAGGCTGCAGA chr4 + 94230402 76033206 76033205 76033278 76033206 76033205 76033278 73 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ...:x.....x:...........::........x:x:.x.:.x::.....:..::.:..x..x:.....:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 71801134 NA +6753 chr4 + 190214555 147847107 147847106 147847238 132 GAAACCTAATGCTGTGCTCTTTTGTTATCACTCTTGTTCTCTAGGCATTAAGTGTAACTGAAACCCTGATTAAACCCTTGGAAAAATTCAGAAAAGAGCAACTTGGAGCTGTAAAGGTTTGTGTCTAATTTG chr4 + 94230402 33162657 33162656 33162774 33162657 33162656 33162774 118 GAAACTTAAC-CCATGCTCTTTT-------------TTCTTTAGGCACTCAGTGTTACTGAAACTCTGATCAAACCTTTGGAACGATTTAGGAAAGAGCAGCTAGGAGCTGTAAAGGTTTGCCCCTCATTTG .....:...:-.::.........-------------....:......:.x.....x........:.....:.....:......x:...:..:........:..x.................:x:..x..... 10M1D12M13D96M 97/118 82.2% 118/94230402 0.0% 14/118 11.9% 114684450 75530105 +7649 chr4 + 190214555 147857513 147857512 147857771 259 TTTTGTTTCTGTTTAATCATAGTTTTTTTTTTATTTGTAGGAAGAAAAAAAGAAGTTTGACAAAGAGACAGAAAAGAATTATAGTCTAATTGATAAACATTTGAATTTATCAGCAAAAAAGAAAGACTCACATTTACAAGAGGTATAATTTTTTATTTTTCTGTTACGTTTTCAAAATTTGATAAGCAATACATGTCTTTTAAAAATGT-GCTTTAATTTGGATAACTTTTCATCTGGCATTATATAGAGATAACAAAAA chr4 + 94230402 33166402 33166401 33166641 33166402 33166401 33166641 240 TTTTATCTGTGAATGAATGTTACTTTGTTCCTTTGTCTAGGAGGAAAAGAAGAAGTTTGATAAAGAGACGGAGAAGAACTACAGTTTGCTAGAAAAACATTTAAATTTATCAGCTAAGAAGAAGGAGGTACAATTACAAGAGGTATTGTTGCTGCTCTTCTTCCTTC--------AATTTA-----------CTGTCTTTTGAATAGGTAGATGTATTTTATACAAATGCAAAAGCAGCATT-CATAGAGATAAAATAAA ....:.:.x..xx.:.x::.x::...x..::.x.x.x.....:.....:...........:........:..:.....:..:...:.:x.x..x........:...........x..:.....:..xx:...x.............x:..x:.xx.:..::.x:.x.--------.....:-----------x........:..x.x..-.x.x..x...:x.:..x.x:xx.xx::.....-:..........x.x... 167M8D6M11D17M1I32M1D17M 166/239 69.5% 240/94230402 0.0% 21/239 8.8% 114691111 75523444 +7803 chr4 + 190214555 147864843 147864842 147864963 121 TAGGCAGATATCCAAGTAGAGCAGAACCGGCAACACTTCTATGAACTGTCTCTCGAGTATGTGTGTAAGCTGCAGGAAATCCAAGAAAGAAAGAAGTTTGAGTTTGTGGAACCTGTGAGTA chr4 + 94230402 33169396 33169395 33169516 33169396 33169395 33169516 121 TAGGCGGACAACCAAGTGGAACAGAATAGAAAACACTTCTATGAGCTCTCCCTCGAATATGTGTGCAAGTTGCAAGAGATTCAGGAGCGGAAGAAATTTGAGTGTGTGGAACCTGTAAGTA .....:..:.x......:..:.....:x.:x.............:..x..:.....:........:...:....:..:..:..:..:x.:.....:.......x............:.... 121M 96/121 79.3% 121/94230402 0.0% 0/121 0.0% 114695447 75519108 +7821 chr4 + 190214555 147866702 147866701 147866821 120 TGTGTCTTAGATGCTGTCATTTTTTCAGGGGATGTTTACCTTCTATCATCAGGGCCATGAACTTGCCAAAGACTTCAATCACTACAAAATGGAACTACAGATCAACATTCAGAATGTAAG chr4 + 94230402 33170993 33170992 33171112 33170993 33170992 33171112 120 TGTATTTCAGGTGCTATCATTTTTTCAGGGTTTGTTCACTTTCTATCACCAGGGATATGAACTCGCTAAAGACTTCAGTCATTACAAAATGGCCCTGCAGATAAATATACAAAATGTAAG ...:.:.:..:....:..............xx....:..:........:.....x:.......:..:..........:...:..........xx..:.....x..:..x..:........ 120M 97/120 80.8% 120/94230402 0.0% 0/120 0.0% 114695709 75518846 +3138 chr4 + 190214555 147873657 147873656 147873730 74 TCTCTACAAAAAAACAAAAAA----------CAAAACACACACACACACACACACACACACACACACACACACACACTCTTGGC chr4 + 94230402 4929399 4929398 4929482 4929399 4929398 4929482 84 tctctgAAAATAGCTAAGAAATGAAACCACTCAAAACACCCATATGCACACACACGCACAAACACACCATCACACAGTCTCAGC .....:x...x.:x:..:...----------........x..:.::.........:....x......xxx......x...::.. 21M10I53M 55/74 74.3% 84/94230402 0.0% 10/74 13.5% 142944258 47270297 +9267 chr4 + 190214555 147874992 147874991 147875156 165 ATTTATGTGTGTTTTTTAATCCATTTCAGACACGGAATCGATTTGAAGGAACAAGGTCAGAAGTGGAAGAGCTCATGAACAAAATCAGACAGAATCCCAAGGACCACAAACGAGCAAGTCAGTTTACAGCCGAAGGCTACCTGTATGTCCAGGAAAAAAGTAAGA chr4 + 94230402 33172250 33172249 33172414 33172250 33172249 33172414 165 ACTGATGTGTTTTAGCTATCTTGTTTTAGACACGAAATCGTTTTGAAGGAACAAGGTCAGAGGTAGAGGAACTCATGAACAAGATCAGAAGAAATCCTCAGGAACATAAAAGAGCAAATCATAACACAATGGAAGGTTATCTCTATGTACAGGAAAAAAGTAAGA .:.x......x..xx:..x::::...:.......:.....x....................:..:..:..:...........:......x::.....:x....x..:...x......:...xxx:...::x.....:..:..x.....x................ 165M 126/165 76.4% 165/94230402 0.0% 0/165 0.0% 114702742 75511813 +8779 chr4 + 190214555 147879222 147879221 147879346 125 TTTGTTGAAGGGCCTGCTCCGTTTGGTTCCAGTTGGGTCAAACACTATTGCATGTATCGAAAAGCAGCAAAGAAGTTCAACATGATCCCATTTGAGCACAGATCTGGAGGGAAACTTGTAAGTAT chr4 + 94230402 33172833 33172832 33172957 33172833 33172832 33172957 125 TTTTATGTAGGGCCTGCTCCATTTGGTTCCAGTTGGGTGAAACACTATTGCACATATAGGAAAGAGACAAAGAAGTTCACCATGATTCCATTTGAACACAGATCAGGAGGGAAAGCTGTAAGTAT ...xx..x............:.................x.............::...x.:....x::............x......:........:........x.........x:......... 125M 107/125 85.6% 125/94230402 0.0% 0/125 0.0% 114706389 75508166 +3913 chr4 + 190214555 147882333 147882332 147882423 91 TACACCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAACCATTTGAACCCAGGAGGCGGAGGCTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:...x......:........x..::........x.xx.x...x..:..........:..x:xx:.....:..------..x...:..... 73M6D12M 64/85 75.3% 85/94230402 0.0% 6/85 7.1% 71849128 NA +6159 chr4 + 190214555 147906632 147906631 147906724 93 TTTCAGGCCTGGCGTTTCCTTGACCATGCAGGCATTTTCCGAAGAGGAAAGGAAGCAGTGGTTGGAAGCTCTGGGTGGAAAGGAAGCTGTAAG chr4 + 94230402 33177570 33177569 33177662 33177570 33177569 33177662 93 TTGCAGGCCTGGAGTCCCTGTGACCATGCAAGCCTTTTCTGAGGAGGACAGGAAGCTGTGGATGGAAGCCTTGGATGGAAAAGAAGCTGTAAG ..x.........x..::.:x..........:..x.....:..:.....x.......x....x.......::...:......:........... 93M 76/93 81.7% 93/94230402 0.0% 0/93 0.0% 114729062 75485493 +3042 chr4 + 190214555 147911073 147911072 147911148 76 CTCTTTTTCCCTTCTTATTGCAGAGACGTTAAAACATGTCTTTTTTAGAAAACACGGTTTTGCTAAGCAGAAATAA chr4 + 94230402 58093540 58093539 58093615 58093540 58093539 58093615 76 CTTTTTTTCCCTTTCCAATGCAGACACATTAAAACATTTCATTTTTGGTAGTTTTGTTCTTGCCACCaaaatataa ..:..........:::.x......x..:.........x..x.....:.x.:x:x:.x.:....:.xxx.:.x.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 89817533 NA +3025 chr4 + 190214555 147912412 147912411 147912482 71 GCACCTGTAATGGCAGCTACCTGGGAGGCTGAGGTGGAAGAATCGCTTGAACCCAGGAGGTAGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x....:.xx.......:..::........x:xx:x...x.:...........:..x.xx:..:..:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 71879206 NA +3777 chr4 + 190214555 147912522 147912521 147912651 130 AAAAACAAAAAACAAACAAACAAACAAATATATATATATATATATATATATATATATATATATATATATATATATATAAAATTCCTGTGTATATTATTTAAATAGGAAATACATAGCCTTAAGCTTTTTT chr4 + 94230402 37548402 37548401 37548527 37548402 37548401 37548527 126 AAAAAAACAAAACAAACAAACAAAAAAACTTACATATGTATGTGAATATGTGAATATATGAAAAATTATATGTGAAAAACAT---TGTATATATAAATT-TACATTATGTCCGTGTTTTTAAGACTTTTT .....x.x................x...:x..:....:...:.:x....:.:x......:x.x.xx.....:.:x.x..x..---...:.....x.x..-x.:.xx.x:.x.:.:x::.....x:..... 82M3D14M1D30M 86/126 68.3% 126/94230402 0.0% 4/126 3.2% 110364120 79850435 +3455 chr4 + 190214555 147912524 147912523 147912602 79 AAACAAAAAACAAACAAACAAACAAATATATATATATATATATATATATATATATATATATATATATATATATATAAAA chr4 + 94230402 37548400 37548399 37548478 37548400 37548399 37548478 79 AAAAAAAAACAAAACAAACAAACAAAAAAACTTACATATGTATGTGAATATGTGAATATATGAAAAATTATATGTGAAA ...x.....xx...............x.x.:x..:....:...:.:x....:.:x......:x.x.xx.....:.:... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% 110364124 79850431 +7387 chr4 + 190214555 147912997 147912996 147913172 176 TTTTTCCTATTTTTAAAAGGAAGAGAAATGTGATAAATAATAATTGTACACTTAATGTTTTAAA---CTGTTTCTTGTAGATGCACAGTTGGATAAGATGGGGTTCACAATTATCAGAAAATGCATCAGTGCCGTTGAAACACGAGGTAATA-------TGATTGAATCATTTCATTCATGAGAGG chr4 + 94230402 33180007 33180006 33180183 33180007 33180006 33180183 177 TCTGTCTTATTTTTCAGAGAAAGACATATTT---------TAATGGCATTTTAAAACTTTTCAAACTCTTTTTCTTGTAGGTGCGCAATTGGATAAGATAGGGTTCACAGTCATCAAAAAGTGCATCAGTGCTGTTGAAACACGAGGTAATGATAAACTCAACCAAATGTTTCTGTTTATGGAAGG .:.x..:.......x.:..:....x.x..x.---------....x.:.:x:.x..xx....x..---..x..........:...:..:...........:.........:.:....:...:...........:..................:-------::.:::...xx..:::..:...::... 31M9D24M3I85M7I27M 125/167 74.9% 177/94230402 0.0% 19/167 11.4% 114732990 75481565 +6232 chr4 + 190214555 147923873 147923872 147924085 213 TGAAACATATTTTAC----CAATTGCGCATTAATTTTAAATTGCCAAGGGCAAT------------GAAGAAAATAAAGAACAGCTGTCCTCAGAAAATTTACAGCAAGTAAACTAGAGTTTC-TCTCTGTCTCTGTTTTAATCAAAATGGGTGTGAGGTGAGCGTGGGTGGAAATAGAGGACAGTCTTCTGTGGGAGGGAGTT--GAAGAGTCTTGTGGTGTC--TGCAGAAA chr4 + 94230402 33181712 33181711 33181934 33181712 33181711 33181934 223 TAAAATAATTTTTACTTGACTATTTTACTTTAATGATAGCATATCAAAGGCAAGTTATGTTCGACAGAAGAAAGCA--GGACAGATGCC---------TTTTCAGAGATTGTGCTTGTGTGCCATGTTTTTATCTCTTTTAATCATAATGGGTGTGAGGTTGGTGTGGGTGGAAAGAGAGGACAGTCTTGTGTGGGAGGAAACTGAGAATAGTCTTGTCATGTCATAGCAGAAA .:...:.xx......----.x...x::.x.....xx..:xx.::...:.....x------------.......::.--.:....x..:.---------...x...x:.x.:x:..x.x..x:.-.x.:.x.x...x.........x..............x:.:...........x.............x.........:.::.--...x........x:....--x....... 15M4I35M12I10M2D11M9D25M1I80M2I18M2I8M 150/202 74.3% 223/94230402 0.0% 32/202 15.8% 114742161 75472394 +3237 chr4 + 190214555 147937855 147937854 147937921 67 TGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCTGTGAGGTGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x..........::x:..x.xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 71904644 NA +9605 chr4 + 190214555 147939750 147939749 147939946 197 TTTGAATGCAACTGTTTGATGGCTTTTAAAATATGATAGTCTTCTATTTTGCTAATAGTTTGTTTCTTCCC------ATAGGTATAAATGACCAAGGATTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTATGTTGATGGGTATGCCTC--TTTTCTAATCATTTTTCCATGTGTTATTT-GTGTATGTT chr4 + 94230402 33185522 33185521 33185707 33185522 33185521 33185707 186 TTTGAATGTTACTGCT------------GTGTTTGATCTTCTGCTGTTTT--------TTTTTCTCTCCTTTGCATAATAGGTATAAATGACCAAGGATTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTTTGTTGATGGGTATGCCTCTATTTTATGATCTTTTTTTCATATTTTATTTCATGTTTGTT ........:x....:.------------:x:.x....xx...x..:....--------...x.:...:.::------.....................................................................x..................--....x.:...x.....:...:.x......-:...x.... 16M12D22M8D13M6I88M2I29M1I9M 152/177 85.9% 186/94230402 0.0% 29/177 16.4% 114754228 75460327 +49993 chr4 + 190214555 147940087 147940086 147941299 1213 TCTATTACCTCTTATTAAGAAATGAAAAAAGAATGCACCCCCTGGTTGACTATCTTCCTGTGCTTGCT-TCTCACAGGGAAGTGGCAGTCAGGCCTCTATGATTTGCGTGGCTTCCAAATAGCCTGTCCAGAATTGTGACAGTACATTTGGTTGGACAAGACCACTGGGACTCGCTCATTTTTATGGAGCTTCCAAAACTGTCATTTGACAGCAAGGGTCTGATTCTCAGGGATTCATTGGTATTCACAGTGGCTTGTTTGTAGTTCACACCAGGCTCTCCTCCAGAACCATGCATGCTCCATCTGTGCTGATAACACAGTGTTCTTTGGCATCGCAGACTAGAGGAAGCCAGAAAGTGAATTCATTTCATTACCCCAGACATTATGTGAATGACAAAGCGCTTTTACATTACACACTGCTGTCAGTTCATTGCCACCTGTAAGACACTCCA------CTTCTCCCCCACCCCAAAACAGGCTGCCTCTTGAAGAGTGATGATAACTCATCAGGCTAGAGGGCCTGTGTATCAAACCAATCTGTCATTATGATCTTGCTACATATTAATTTATTTGATACCTTACTTTAATTAATCAATATTAACAATGCCCTCAGGTGTGCTGTGAATGCATTCCAACCTGTCTGCATC-TTAAAACATTACAGCAAAGAGTCATTTT-TAGGAAGCATGAGCCAAGTTGAATAAAATCAACTGCCATGCTACAGATAGGATTGCTTGTTTGCCTATATTTGAATTAAGGATTTAATAAGCAACAATCTTTTATAAGCTATTAACCACAGGAGAAATTGCCCGTCATCAGTTGGAGAGCCTTATTAGAATACATTCACTTCCATAAGCTGTTTTCATTTTCTGC-CTCTCTGGTTTAACTTGGGTGTGCAATTTTGGCAGTCAGATTTTCCTTTTTACCAATAGTGGTCTCCAAATTAAATAGACTCAGGTTGCCAGTGGTTCAGTAGCAGCTGGAAGAATTTAAT-GGGAGTACAGCATCTGCTTTTACTTAATTTTAAAATTGGAATCACTTCTT-TCATTTCCAAGATGGTGTTATGATGATTAGAACT-GGAAGAGTATATTGATAACAGAATGGG---AAATG-TGGACTGAAA---------GGCACA-----------TTTTGCTGGTAAATTGGTCCTAAGGACCTGGCATTATTTTTATTATCATCTTGTTCCTGTTCAAGGAAAGTTTGAACAAGGGTTTTTCTGTGGT chr4 + 94230402 33186598 33186597 33187814 33186598 33186597 33187814 1217 TCTGCTATCCCTGAGGGGGGAAAGAAATAGTGCTGG--CACCTGGCTGAAATCCCTCATCTGCCTGGTATCTCTCACCAAAGTAGTAGCCTTGACTGCAAGATGTGCTGTGTTTCCCAATTTCTTGTCCTGAGCACTGACAGTACATGCAGTCAGACAAGACCACTGGGATTAGTTCATTTTTATAGAGCTTCCAAACCTGTCACTTGACAGCAAAGGTCTGATTCTCAGGAATTCATTGGTATGCAAAGAAGCTTGTTTGCAGTTTGCACCAGGCTCTTCTCCAGAACCATGCATGCTCCATCTGTGCTGATAACACAGTGTTCTTTGGCACTGCAAACTGGAGGAAGCCAGAAAGTGAATTCATTTCATTACCCCAGACATTATGTGAATGACAAAGCGCTTTTATATTATATGCTGCTGTCAGTTCAGTGCCACCTGTAAGACTTTTCCTTTTCTTTTTTTTTCTTTCCTCAAACAGGCTGTCTCTTCAGAA---ATGATAAGACATCAGGCTTGAGGGCCTGTATATCATATCAATCTGTCATAATGACCTTCCTAAATATTAATTTCTT--GTATCTTACT----TTAATCAATATTAACAGCACCCCAATGTTCCTAATTTGTGCACATAAACCTGCCCAAATCTTTAGAGTATTGCAGCATAACATTGTTTTACAAAAAATATGAACTGGGATTAGTAATAATGACTGATATATAACAGATTCCTGTGGTTGTTTATCTGTGTTGGAGTTAAG--CTCAATAAACAGTAA-----------CCATTGACTATAGGAAAAAAGACTAGCTGTCATTCAGAGAATCTCAGTAAGATGCATTTGATATCATGACATGTTTTTCACTTTTGCACTTACTGGCTTTCCTTGGGCGTGCAGGTCTGGCAGACAATTTTTCCTCTCTGCCATTAGTCGTATCCAAATTAAATAGACTTAGGTTGCCAGTGGTTCGGTAGCAGCTGGAAGAGTTTAGTGGGGATTCCAGCATCTGTTTTTAGTTATTTTTTAAATTAGAAACATTTTTTCTCATTCCCAAGTT--TCCTATAGTTATTTGAAGTGGGAAGAATACAGTGGTATCAAGACAAGACAAAATACTGAACAGAAAAAAAGTTAGGGTGCAAGCAGGTGCTCTTTTTCTGATGATTTGTTGAAAGCGATC-----CTATCTGTGCTCTTTATCTGTCTCTCCTCAGAGAAGAAT--AAAGAGGGTTTCTTTTTGAT ...::..:.:..x.xx::.:..x....x.:x:x..x--.x.....:...xxx:.:..x.x...:..x.-....x..xx:....:.:..:.xx.x..x:.x...x...xxx.:....x...xx.:.....x..::xx...........x::..::................:.x.:..........:...........x......:..........:...............:............x..x..x:.........:....::...........:....................................................::...:...:.................................................................:....:.::..............x...............x:.:.x------:..:.:::.:x:..:x..........:.....x.::.---.......xx.........x..........:.....x.:...........x....:...x...x..........x..--:..:......----................:::...:x.x..x:x:x:.xx:....:x:x......:.::x...-...:.::...:.....x.:x:.::....-:.::..::....:.:::.x.x.:...x.x::....x:..::x......xxxxx..x......::..:.:..x..:.....--:.:.....:..::..-----------.:...:..:.:....:...xx:.:x.:::...x.::....::..:.x..::..:....::x.x:...:.xx......:xx:..:...-..:x....:..xx......:.....:x.:......x..:x.......:.:.:...x....x..x.................:................:...............:....:.-....x.x.........:.....x...x....x.....:...x..:..:..-.....:.....x.--.x:...::.x...x...x.-......:..:.x..:..x..::.:::.---....:-..:..x....---------..::..-----------....x...:.:.x...x.xxx.:x..:.-----:...:.x.::.x.:xx::...::..x:...::...::x.--..x:.......:.:.x..:. 36M2D30M1I383M6I37M3D76M2D10M4D60M1I28M1I80M2D15M11D87M1I121M1I50M1I13M2D19M1I27M3I5M1I10M9I6M11I28M5D39M2D20M 864/1180 73.2% 1217/94230402 0.0% 70/1180 5.9% 114753489 75461066 +18599 chr4 + 190214555 147943802 147943801 147944486 685 TTCACTGATTCTAAAGGACTGCTAGGGATGATTGAGC---TATTTGAAAACAGTGAAAA-----TTTAAGAGAGAATTAGTAACATAGACACTGTGTAGTCATTT-GCTTCTGATGTGACAGCTGCTTTTTATTCCATGAATTTAGAATGATGGCTTATTTTTCCATAGACAGAAT-ATGATTCTCAAAATACGGAATCATAATTTGGTAGAAAGCTGGAAATAAAAGATTTCCTTTAGAAGCCTCTTGGATTTTAAAAAGGTGGTTTGCTG----GTAGCAAGTT-GATTGAAAATGTTATCTGACTTGTATGTTAAAACGAGATTTAAATAATTGATTTAATGAGAGAGAGAATATTCAGTTACTGAAGTAATTGGTTGGCAAAGTCTTTAGAACAGAATTATTTAGTCCTAGTTATAAAGGATTGCACCTTTAATCAGGGGGCTTAATTTGATTTCTT---GAATGTATCTGTGGCTTGTCTGACAAGCTCAGTAACAAATGAGTTCAGAATTGTAGGAACTGATCAAAATGTAATCAGTGTCAATTGCCATTGTTGTAGTTTATTGCATATTGCTGTCAGTTGC-TGTAATCA-AGAAATGTTGAAGTGCTTTAAAAGTCTTCAGACCTTTGAGTAATTGACCTCATATGTATGATGCTATGCCTGTGAAATAACCATCACTTCCTGTTTT--ACTTTATCTT chr4 + 94230402 33189086 33189085 33189775 33189086 33189085 33189775 690 TCCTTTGACTGGAAAGGACAGCTGATGATTATGAAGCAGTTATTTAAAAACACTGGATAGGATATTACATAGTGGTTTAATAATAAAATCCCTATAGATTTTTCTAGTTTCTTATGCTACGGCAG--TTTTATTTAAGGAGTTTGGTAGAAAGGTTTTCTTCCCCAAAAAGAGAATTAGGAATC-----AGGAGAAGCTAGCATGTGGAAAAGAGA-AAAAATAAATGTTTTCCTAAGACAGTTGTGAGGATTTTGGGT-GGTGGCTGACCGACTAGTAACAGTTTTGGTTGGAAATGTAATCTGACTTGTATTTTATA-TGGGATTTAAATAATTGATATAATGAGGGAGA--ATATTCAGTAACAGAAATAATTGGTTGGCAGAGCTTTTAGAACAGAATTATTTAGTCC-AGTAA--AAGGACTACTCCTTTAATCAAGGCTCCTAATGTGATTTTTTTAAAAATGTGTCTGCCATTTGTCTGGCAGGCAAAGTAACAAATTAATTCTGAGTTGTGTGGATGGTTCAACACATAATCTATGTCATTCACTCTTGTTGTAGTTTACTGCA-GCAACTGACAGGAACATGTAATAATAATAATGCTTGAGCACTTGAAGTTACAAAATAGATAGGACTAATTTGGCT-ACATCCCTGTGGTCTTGACTGTCAAATAACTATTACTTCCTGTTTTGAGACTTATCTT .:.x:...:.xx.......x...::x...x..x:...---.....:......x..:.x.-----..xx.x..x.:x...:...:.x.:x.x..:.:x.x.:x.:.-.:....x...:x..:..x.--.......:x.x..:...:.x.x:.x..:..x:..::...x.:.x.....-.x..x..-----.x:x.:.:::.xx..x...x.:.:..x-::.......x.x......xx::x..::x:xx.......:::x-.....:.x:.:.----...:..:x..-.:...:......x.............x...x.-:.:................x.......:....--.........x..x...:.............:..::.......................-...x.--.....:.:.x..........:..xx.:....x......:..---:.....:....:x::.......:..:..xx..........x.:...x..:....:x.:.:x.x....x.::.....x:.....x.::.:x.............:....-::x:...x...xx:.-......x.-.:x....:.x:..::...x..:xxx.xxx.x.xx.xx..x.....x:x..-.:..x:x..xx.::x..x....x.......:..:............--:x:....... 37M3I19M5I41M1I19M2D49M1I7M5D27M1D42M1D12M4I10M1I32M1D32M2D58M1D5M2D41M3I108M1D15M1I8M1I50M1D46M2I10M 462/668 69.2% 690/94230402 0.0% 39/668 5.8% 114754716 75459839 +7054 chr4 + 190214555 147946613 147946612 147946717 105 CTAGATGTAAAAACATGCAATGAGGTGGACCTGGAGAATTCTGCAGATTGGGAAGTGAAGACAATAACAAGTGCCTTGAAACAGTATTTGAGGTAAGCTCCTCTC chr4 + 94230402 33191008 33191007 33191112 33191008 33191007 33191112 105 CTAGATGCAAAAACCTGCAATGAAGTTGACCTGGAAAACTCTGTAGACTGGGAAGTGAAGACAATTACCAGTGCTATGAAGCAATATCTGCGGTGAGCCTCTCTC .......:......x........:..x........:..:....:...:.................x..x.....:x....:..:...:..x...:...::..... 105M 86/105 81.9% 105/94230402 0.0% 0/105 0.0% 114755605 75458950 +5448 chr4 + 190214555 147955298 147955297 147955383 86 GCTGTTCTTTTCACACAGGAGTCTTCCAGAGCCTCTCATGACCTATGAGTTACATGGAGATTTCATTGTTCCAGCCAGTAAGTATT chr4 + 94230402 33192508 33192507 33192593 33192508 33192507 33192593 86 GTTATCCTTTTTTTACAGAAGCCTTCCAGAGCCACTGATGACGTATGAGTTGCATGGAGAATTCATCATTCCTGCCAGTAAATATT .:.:.:.....:x:....:..:...........x..x.....x........:........x.....::....x........:.... 86M 69/86 80.2% 86/94230402 0.0% 0/86 0.0% 114762790 75451765 +15531 chr4 + 190214555 147964938 147964937 147965446 509 GGAAATATATTTGATTCTGAGTTCTCTATTAACTATTGTTTTCTTTTTCTTTATTTTTTTCTTTATTATTATTTTTTTTTTGGAAGAAAGCGGCAGCCCAGAATCTCGTGTTAATGCGATCCATTTCTTGGTACACAAACTGCCAGAGAAGAATAAAGAGATGTTGGATATTTTGGTGAAACACTTAACAAAGTAAG--------CCTCTTTT---------------TCTTCGTTTTAACTTTCTTCACTTTGC------TCTAGGTGCTGGG--TAGTGC---------TCTGGGATTTGTGACGGGTGGAACTGGGGACCACACCTGGAAGGGCAGGCTGAACGTTTGACTCAT--TGTGTGTGTTTTGGATAAGACTGTTGAAAT---ATGCTTTCATGAAGCTGTATAATTATTTGC-TTAACATCTCTGCCAGCAACTCAGGGTTTGATTTGAAGTGAAAGAAGAGAATATTATACATTACCCTATACACAGATTCTGGAAGTGTGAATA---TAAGTTTGTTAGAATATTTAGCTTGGTTTCACACCTACC chr4 + 94230402 33194622 33194621 33195161 33194622 33194621 33195161 540 GGGAGTAGCTTTGTTTTTTGGGTTTTTTTTG--------TTTGTTTGTTTTGAGCTTCTCATTTGTTTCTATGTCCTCT-----AGAAAGTGGGAGTCCTGAATCTCGAGTTAATGCTGTTCACTTCTTGGTCCATAAACTCCCAGAAAAGAACAAAGAGATGCTGGACATTTTGGTGAAACATTTAGCTAAGTAAGTGTTATGACCTGCTTTAATGCCTTGTCAGAACCCTTGTCCTTATCTTTCTTTCACTGCAAAGAGCCTAGTTACTGTGGCTGGAGCTGAAGCCCGTCTCAGTGCTGTCATACACAATACCAAGAACCAAACGTGCAAAAGCAGACAAGACGTTTGACTCATACTGTGTATATTTTGGAGGGAAAGGCAGAAATCTAATCCGTTAATGAAGCCATATAAGTATTTACTTTAGCAGTCCTGCCAGCAGTTGAGGGTTTGA-TTGAAGTGAGA-AGGCGAACATTATACTTT---CTCTTTGCAAATTCTGGCAAAGTGAATAGTGGAGATCTGTTAGCAAATTTAAGTTGGTTTCACACTTGCC ..:.:..xx....x..:.x:.x.:.:.x..:--------...x...x.:..x.x:..:.:x...:..x:...x.::.:.-----......:..x..:..x........x........x:.:..:........x..:.....x.....:.....:.........:....:..............:...:.x.......--------...x:...---------------:.:.:..::.x.::..::.:x.x:...------:....x.:...x.--.:.x..---------...x:.xx:...x.::x::::x..:::.:....x..x..x..::....:.x::.............--.....:.:.......x:::.xx.:x.....---..x.x..x.......::.....x.....:.-...:..x::.........::.x.........-.........:.-.:.x...:.......x..---..x.x::..:.......x.:x.......---x.::.:......x.x.....:x............:.:.. 31M8D40M5D113M8I8M15I27M6I13M2I6M9I66M2I30M3I30M1I31M1D11M1D18M3D28M3I39M 347/491 70.7% 540/94230402 0.0% 67/491 13.6% 114770316 75444239 +11243 chr4 + 190214555 147966678 147966677 147966847 170 AGTGTTTCAAATCACTCCAAGCAGAACCTGATGACTGTGGCAAACTTAGGAGTGGTGTTTGGACCAACTCTGATGAGGCCACAGGAAGAAACTGTCGCTGCCCTCATGGACTTGAAGTTTCAGAATATTGTTGTGGAAATCTTAATTGAAAACCATGAAAAGGTAAAATT chr4 + 94230402 33195424 33195423 33195593 33195424 33195423 33195593 170 AGTGTTTCAAAGCATGCCAAGAGGAATCTAATGACTGTAGCGAATCTGGGGGTGGTATTTGGACCAACCTTAATGAGGCCTCAGGAAGAAACTGTAGCAGCTATCATGGACCTGAAGTTTCAGAATATTGTTGTTGAAATCCTCATAGAAAATCATGAGAAGGTAAGTTT ...........x..:x.....x:...:..:........:..:..::.:..:.....:...........::.:........x..............x..x..:x........:......................x......:.x..x.....:.....:.......:x.. 170M 139/170 81.8% 170/94230402 0.0% 0/170 0.0% 114771254 75443301 +3351 chr4 + 190214555 147990880 147990879 147990958 79 GTGGTGCATACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTACTTGGGACCAGGAGGTCGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x...:..:...........::........x:xx.x.:.x:.....::x....:..x.:x:.....:.. 8M2D69M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 71957679 NA +3096 chr4 + 190214555 148013548 148013547 148013617 70 CATGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 71980351 NA +20438 chr4 + 190214555 148023046 148023045 148023814 769 TGTTTTGATTTAA-----ATTTAATCAGAGATTTTATTTTGGAATCTTCTGTTAAAAAAATAAAAGGCTATGACCTCTTCCCTTCATTGGAAGGAATGGATTTTGGGCTCTAGCCTGTCTTGAATGAACTCCAAATCAAATGTTGT--GGTGCTGGTTTACTGGAGTAACACACAGGTTTCTGTTCATGGTAAATAATTCCTGTCCTTTATGCT-TTGTTGGAAGATTTTTCGGACGCCGCCCGATACTACATTCCCTGAGCCCACCTGCCTGTCAGCATCACCCCCAAATGCGCCACCAAGGCAGTCGAAGAGACAAGGCCAGAGAACCAAGAGGCCCGTGGCCGTCTACAATCTTTGTCTGGAGCTGGAAGATGGTAAGATGTTAATGATATTTTTTG-CTTGATAGCATGTTGAGAGTATGGCGTATCATATGTCGTCAGGGCAGGCCACAGTTTTCTG---TCATCTGTGTTTTAATTTCTTCTTCCCTTAAGATTATAATTTTGAGATT-----TACAGGGAGGGTGAA--GCTTT----TTTGTAAGGGAG---------------AAAACGCAAGTTT-------CGGTTT------TGTGTTTGTCTTTGTTATGCATGGTTCT-------TTTTTTATTTTTAAAAGACAGCTTAAATTTCTTTTTT---GGGAGACTTGTGTGACCTC----CTGTGAGGTTACATAACCCTGAGACAAATGGAAGGGGAACTAAAATTAAAGCAGATCTTTTATGAGAGGAGCGGATGGAGTCTCATGTTAAATGCATCTAGATTAAAGGCACAGTTCACCATCGCTCTGGGG chr4 + 94230402 33210111 33210110 33210896 33210111 33210110 33210896 786 TGTTTCCattttatatctatttattta-----tttattttaaaaaCGCTCATTAAAGA--------TCCATGGCATACTCTCAG-ACTTGAAGGAATGGATTTTTGGCTTCTGCCTGCTTTGAATGAAATCCAAAACAAAGGTTGTTTGATAATGGCTTACAGTTGCATTAGATAAGTTGCTTTTCATGATAAATAATTAACACCCTTTGTGTTCTTGACTGCAGATTTTCAAAACCCTGCCTGATGTCACTTTTCCTGAGTCAATCTCTATGTCAGTATCTCCTCCAAATGCCCCACCAAGGCAATCCAGAAGACAAGGGCAACGTATTAAGAGGCCTCTGGCTGTGTACAATCTTTGTCTTGAGCTGGATGATGGTAAGATGTTAATAATACTTTCAGTCTTTGCAGCAGATTGATGTTAGTGTGCA----------------------------TTCTGACTTCATTAGGTTTTTCATTTCCTGTTTCATTTG---TATAGTTGCGTGCATGCGCATACATGCTTGTTTAATTGCTTTGGAATGTGTAAAGAAGCAAGTAGTGTACAGAGAAAGGAAAGTATAGACAAGTGGCTTGCAACATATGTTTAAAAGTAGGATGAACTATCCTAAATGTATTTTCTGATTCTGAAGAAGAGTCAAGTCCTATGTCTTTGGGGGAAATCTCTTTGGCCTCTCTACTG-AAGGTTACATAGCCGTAAGATAAATGGA--GAGAACTAAAATTAAAGCAGATCTTTTATGAGAACAGCTAATGCACTCTACTGTTAAATTCAACTGGATTAAAGTCTCAGGCCACCCCTGCACCAGAG .....:x....x.-----.....x.:.-----........::..x.x::::.....:.--------x.:...:.x.x:..:.xx-.:.x...............x....::x.....::.........x......x....x.....--.:.:x...:....x.xx.:.x:.x.:.:...x..x......:.........xx:::.....:..:.-...x:x.x.......:x::..x.:...:...:::..x..:......:.x.:..x:x......:...x..:........x...........:..x.::........x..:x.x.::........:x....:..x..............x........x.................:...:...:x.-...x::....x:....x:x..xx.:.:.----------------------------.....---....:x.xx....x.....:.x..:.x..x:---....:..x:.x.xx.-----....x.xxx.x.x..--.....----.x.....:.:..---------------:...x.x....x.-------:..:..------.:.....:xxxx.:xx...x.:x:.:..-------....:.:x..:.:..::.x..::x.:x::.x.x.:..---....:.::.x.x..:....----...-:..........:..x.:...:.......--.:...............................:x...x:...x.x...xx........x..x..:........x.x...x:....x::..x.::.:. 13M5I9M5D26M8D18M1D61M2I66M1I185M1I28M28D5M3I31M3D15M5I15M2I5M4I12M15I13M7I6M6I28M7I37M3I19M4I3M1D28M2D98M 508/721 70.5% 786/94230402 0.0% 113/721 15.7% 114812935 75401620 +3700 chr4 + 190214555 148037704 148037703 148037815 112 GTGTGCCTGTAATCCCAGCTACTTGGGATGCTGAGGTACGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCACGCCA--------------------CTGCTCTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ...::.x....:.:...........::.x......x:x:.x...x.:...........:..x.xx:..:..:..------..x..x.:....--------------------......-.....x....... 74M6D12M20I6M1D13M 79/105 75.2% 125/94230402 0.0% 27/105 25.7% 72004500 NA +3668 chr4 + 190214555 148043677 148043676 148043813 137 TAAGTATATAGGAAAAATGTATAAGGAAAAATGTATATGCATTTTT-----------CATATATATATGTGTATATATATGTATATATGTATATATATGTGTATATATATGTATATATATATGTATATATATATGCATTCATTCCAGA chr4 + 94230402 21109163 21109162 21109306 21109163 21109162 21109306 144 TGAGCGTATCTGAAAAAT----AAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGA .:..::...xx.......----.......xx..:x...:...x.x.-----------.:...x.......::x:.:....::x::.:.::x....::.:....:x:..::x.x.:.:.......:...:x........x..:x.x... 18M4D24M11I91M 86/133 64.7% 144/94230402 0.0% 15/133 11.3% 126934514 63280041 +3056 chr4 + 190214555 148043710 148043709 148043786 77 TATATGCATTTTTCATATATATATGTGTATATATATGTATATATGTATATATATGTGTATATATATGTATATATATA chr4 + 94230402 6200744 6200743 6200820 6200744 6200743 6200820 77 TATGTGAATTTTTTAATGCTATTTTTGTGCATATATGTGTATTTATGTATGTTTGTGTATTTTCACACATAAATATA ...:..x......:.xxxx...x.x...::........:...x.:.:...:.x.......x.x:.:::...x..... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 141842966 48371589 +3265 chr4 + 190214555 148045724 148045723 148045836 113 ACGAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATCCATCTAAGATGTTTTTTGAGAGCAAGGTCCTTGCTGTTGCTGGTGTTCTTGCTTGCTTTGTTTCT chr4 + 94230402 70531910 70531909 70532013 70531910 70531909 70532013 104 ATGAGGTCTCCTCTTAAAAAAATAAAAGCAAAATAGAAAAAAAAAATCCTTTTAAGTTATTTTCATAGG---------TTTCTCTTATTATTACTCttttttttttttttttt .:..:::::.x...:.......x....:x....x.:......:......x.:....x.:....:xx..:---------..x..x..::.:x.::....x:..x:...x...:. 69M9D35M 68/104 65.4% 104/94230402 0.0% 9/104 8.7% 77513814 NA +3380 chr4 + 190214555 148049740 148049739 148049853 114 ATGTTTCTACCTATCTAGCTAATCTTTCCCTTACCCCAAGCTAGAT-----CATAAAATTGTTTTTTTTG----------TTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGCGGGGGG chr4 + 94230402 27947583 27947582 27947708 27947583 27947582 27947708 126 ATAATTTTACATCTCTATCT---TTTTCCCACGTAGGAAGTAAGGTACTCACAAAATATGGTTTTGTGTGCATTGGGTTTTTTGTTTGTTTGTTTGTTTTTGGTGTGTGTGGGGGGGGAGGGGGGGGGG ..:x..:...x.x....x..---:......x:::xxx...:x..:.-----..x..x..x.....x.x..----------.....................xx..x...x.....x..:...x...... 20M3D23M5I19M10I49M 82/111 73.9% 126/94230402 0.0% 18/111 16.2% 120102157 70112398 +3266 chr4 + 190214555 148049791 148049790 148049850 60 AATTGTTTTTTTTGT-----TTGTTT---GTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGCGGG chr4 + 94230402 22379176 22379175 22379243 22379176 22379175 22379243 68 AATTTTTTTTTTTTTAATCCTTGGTTACAGTTTTTTTTTTTTTTTTGGGGGGGGGGGCGGGGGACGGG ....x........x.-----...x..---....x...x...........x.............:.... 15M5I6M3I39M 53/60 88.3% 68/94230402 0.0% 8/60 13.3% 125670615 64543940 +3241 chr4 + 190214555 148049792 148049791 148049851 60 ATTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGCGGGG chr4 + 94230402 27947651 27947650 27947708 27947651 27947650 27947708 58 ATTGGGTTTTTTGTTTGTTTGTTTGTT--TTTGGTGTGTGTGGGGGGGGAGGGGGGGGGG ....xx.....................--...xx.x..x.........x:.....x.... 27M2D31M 49/58 84.5% 58/94230402 0.0% 2/58 3.4% 120102141 70112414 +3241 chr4 + 190214555 148049792 148049791 148049847 56 ATTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGC chr4 + 94230402 34825726 34825725 34825781 34825726 34825725 34825781 56 ACTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGGGAGGGGGGC .:..:x....x...:.x...x...x...x...........x.......x....... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 113224066 76990489 +3383 chr4 + 190214555 148049796 148049795 148049847 52 TTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGC chr4 + 94230402 24989040 24989039 24989086 24989040 24989039 24989086 47 TTTCTTTTATTTATTTGTTTGTTTGTTTTTTTT-----GGGGGGTGGGGGGC ...:....:...:....................-----......:....... 33M5D14M 43/47 91.5% 47/94230402 0.0% 5/47 10.6% 123060756 67153799 +3043 chr4 + 190214555 148049799 148049798 148049844 46 TTTTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGG chr4 + 94230402 89314596 89314595 89314641 89314596 89314595 89314641 46 TTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGGGAAGGGG .....x....................x...xx...:....:x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 58735203 NA +5014 chr4 + 190214555 148058086 148058085 148058353 268 CATTTATTT--------GAACAGAGATTTTCCCATAATATACAGATCTACA-----ATATTTCCTTCTGTCTTTATTAACATTTTCAAACACTCTTGCCCAGGACAGCTGTTCTAGACTTATG--CTGTATGTTTCCCAGACTGGCATGAAAGATCATTTCACTAATGTGTTAGCTTCTGCTCAGAGACCTGGCAAATGAGAGTTTA-GAATCTTTCATTGCAGTGCAAACTTCTGATTTGATCTCGTATTGTATAACCGTAGTGAAATATCTTGGTATTTGGG chr4 + 94230402 33230519 33230518 33230788 33230519 33230518 33230788 270 CATTTATTTCCTAAAAGGAATAGCAGTCTGCTATAAGTGTACATATGTACATACTTAAGTTTTGCTTGGTCTGAATTATCATTTAAAATTGCTGCAGCCTGGGACAGCTGCTACAGAGATATAAACTTCTGATTTACCAGACTGGCGTGAGATACCATTTCACTAATACATTGGCTGCTTCACTGAGACTTCACAATCCAACTTTAACAAAGCATCTATTTCAGTGTTGG---CTGATGTGCTC------TGTATA-----AATGAGGGATCTGGATTGTTGAG .........--------...:..x::.:.x.:xxx.:.:....x..x....-----.x:...:x:.:x....xx....x.....xx..x::..x:x...::.........:.x:...xx...:--..x:xx:...x..........:...:.x.:............:::..:...x..x.x.x.....:.x:...x:x.:xx..x.-:..x.x.::...x.....:x::---.....x..x..------......-----.:...::x....x.:.xx...:. 9M8I34M5I67M2I82M1I22M3D11M6D6M5D23M 165/254 65.0% 270/94230402 0.0% 30/254 11.8% 114827567 75386988 +3139 chr4 + 190214555 148064248 148064247 148064432 185 TCAAGTACTGTTCTTAGCCTGATGTTCACTTCCACGTTAATTTCTCTTTTGGGAGGAGTTGCCCTACTGGTGACATCAGTGAGATTTGGGGAAGGGGGGTTGGGGGGTGAAGTTTCTCTCTGTTTTCCACATTTTCATTGGTGTCTTTTGTATTCTCTTTCTTTTCAGCATCCGCAGTCGGAAGG chr4 + 94230402 48400772 48400771 48400915 48400772 48400771 48400915 144 TCAAGCATTTTTTATAGCTTGA----------------AATTTCT-------GAGGAGGTACCCTCCTGAGTTCAGCACTTCAGTATGGGTGAG------------------CTTCACAGGCGTTTCCATATTATCACTGTTGACTTTTGTATTTTCCTTTTTCTCAGGGTTCAATGTTGGCAGG .....:.:.x..:x....:...----------------.......-------......x.:....x...:xxx..x..x.xx::.x....x:..------------------:...x.xxxxx......:...x...:..x..x..........:..:..:..:....x:.:.:xx..:..x... 22M16D7M7D42M18D73M 98/144 68.1% 144/94230402 0.0% 41/144 28.5% 99663476 90551079 +6313 chr4 + 190214555 148064324 148064323 148064516 193 CAGTGAGATTTGGGGAAGGGGGGTTGGGGGGTGAAGTTTCTCTCTGTTTTCCACATTTTCATTGGTGTCTTTTGTATTCTCTTTCTTTTCAGCATCCGCAGTCGGAAGGCTCGAGCCGTGTATCCGTGTGAAGCAGAACACAGCTCGGAATTATCTTTTGAAATAGGAGCAATTTTTGAGGATGGTAAGTGTT chr4 + 94230402 33234580 33234579 33234766 33234580 33234579 33234766 187 CAATGAGAATGGAGAGAGAATGGTTGAGAAAAGAGTGTTTTCTTTAGTAGTCAAA----AGTAACTGCATCTCAGAATTTCATT--TTTCAGCGTTGCCCACCGAAAAGCAAGAGCAGTTTATCCATGCGAAGCAGAACATAGCTCTGAGTTATCATTTCAGACAGGAGCAATTTTTGAAGATGGTAAGTACT ..:.....x.x.:.::..::x.....:.:::x..:xx..:...:.:x.xx:..x.----x:.x:x..:x.:.::x.x.:..x..--.......:.:xx.x::..:..:..xx....x..x.....:..:...........:.....x..:.....x...x.:.:...............:..........::. 55M4D25M2D107M 123/187 65.8% 187/94230402 0.0% 6/187 3.2% 114829744 75384811 +6722 chr4 + 190214555 148071974 148071973 148072083 110 TTTTTCTCTTCCTTTTCAGTACAAACCTCCAGGGAACCTGGCTGGCTAGAAGGGACTCTGAACGGCAAGAGGGGGCTGATTCCACAGAACTACGTCAAGCTGCTGTAGCT chr4 + 94230402 33243025 33243024 33243134 33243025 33243024 33243134 110 TTTTTCTTTTCTTTTGCAGTGCAATTTTCCAGGGAACCAGGATGGCTAGAAGGCACACTAAATGGCAAGAGAGGACTGATTCCACAAAATTATGTTCAGTTTTTATAGCT .......:...:...x....:...x::...........x..x...........x..x..:..:........:..:...........:..:..:..:x..:.x:.:..... 110M 86/110 78.2% 110/94230402 0.0% 0/110 0.0% 114828949 75385606 +3137 chr4 + 190214555 148076852 148076851 148076922 71 AACATACATGCTGCAGCAAAATATCTCAGTAACTACTAGTGTGGTAGACATTTAAAGATCCTGATCTTTCA chr4 + 94230402 56775592 56775591 56775662 56775592 56775591 56775662 71 AACATCCATTCTGAAACAAGATATCTCAGCAACTCGTAAACTGACAAACATTCAATAATCAAAATTTTTCA .....x...x...x.:...:.........:....xx..:xx..::.:.....:..x:...xx:..:..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 91301260 NA +101156 chr4 + 190214555 148078739 148078738 148081511 2773 AATGAATTTGCTCCAAAACAACAGGTGATTAAAGTAAAGGATTTATTGTAATCTGCTTACAGTCCTTTGCAAAGACAGACATATGTTTTTGCATAAAGATATAAATTGCTTCATTTTAAACTAATTTAGTGTTTCTTTAAATTATATGAACTTTTGGTGAATTATGAACTGTACCAAACCAAGATTTTTAAGAGCAATATGGTACAAAAATAAGAGCAGACAGACAA---TTTGGACTGGGACAGGCATTCAACAGTGAATT-TAGAATATGGCTTTGCTGTTT-AATCAAGCAAAGTTACCTGGAGACACACAAAGAGCCAGTAACTTTGTTAATACAAAAAGCTGATGCAGACCATCTCCATCCCAAACCTGGTTAAGTAAGTCAGAATTCCCATTTTATA---AAAACTAAGTCTGA------------------ACTAAAAGCTGCTTTTGTAAGTAAGCCATTTGTTTGCTAGCAACTCCCAGTCTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCGTAAGTTGACTGTATTTAAAGATCTGCCTATAAATTAAATTCCTGAAATTGCAAAT--------------------TATGTAAGAAAAACTCCTCCCTCTGAGTGCAGCTTTCACAGGTTTCCCCTTGCATAAGGCAGGTGTCTTTTGAAAGACAAGGTAATGTTGCCTGCAT--GGTGAACC-----------------CTGGAG---AAAAGTGT---------------------TGATCTAATTAATTGCTGCTTCCTCG-TGGCCATGGGC--------------------------TTCTCCAG--------CTACAGCTTTTAGATTTTGGAAAATAATTAATATGATTTCACTGAGTAAAC--------CTGATGATTATCATCATTTTTAAAAGATTAATTTGGCCTCTATTC------AAAGTAGTTTATTTA----------GTGCAATCATATTGTTAGTTTCCCCAAAGATACATATGTTTGTGATTTGGGGCAAGAGAAAAGCCATACATTGCATCAGTGCCAAACAAA--CAGATTAATGAATTAAACATTTTAGTGCCACTGTCTTGCTT----ATATGATCTGTAATTTTTCTCCAAAACTGTTTATGTATAAAACTTATT---TTTAAAACCTACCTTTTAAAAATCTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCATCCTGCCATGATCTGTGCGTTCCTGTGACCGGTTCCAGGAGTGCAGAACCTCTTTCCAAGATCAGAAGGGAATAGCTGATCTTTAACAGAGAGAGAGTGCATGGAATTTTTTTTTCCCACAGGAGAAAATCTGATTTTCTAAAATGGGAGGAAA---AGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTT--CTGCTTCT---------AGAGGAAAAGGGAAACGAGG---------CA-GCTTTCCCAAAGCTG----CAGCACTCCAAGGACCTCCTCTCCCACATGTGTTGTCAAATGACACCTTCCAGGAGCTGCAGACACCGCAGTGTGTCATTCCCCGATGGAGCAGGATGAAGCAGAAGCCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAGTACAGAA-AAAGTAGAAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGTAAAATAATGGTAAATTAGATATGAAGCTAAAAAAGGCACAGCTTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTTTACAAAAAAAAATTACCTTGTTT----AGACAAAGATAGTACTTAAATAGTCTCCAGCAAAATAGAATTCTTTCAAAAATACTTTCCCATTCATCCTATTAACCATTAAAGATTTTTTTTGTATGTGTCTCATTTACAAAAGATCCTTATACCTTATTTCAGGTCCTTCATAATTTATACATACAGTAATGTACAGCACAGCAAAAGACTGCAAAAAATTATTTGTAAAGCCAACACAATAGATACTAGAAATCAA-ACCAAGGCATTTAACATCA--TCTTATCCATTCTAATTAAATAAGAAATGGACGCTAACGAGTGTGTATACCAG-TGATGCAGAAGACCGTGGACGAGCGAGGGCT-----CAGAGGCAGCTGC-TGCCCCACGCCACGAGTTCTGTTATTAC-----ACAACAGGA-------------------------ATCTGTATATAT---TTTTTTATTATTTTTTTGTGTTTTTTTAATAACAAAAGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGCTTTAAAACGTTC--GTTAGTCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAAAACTTCTTCCATCTGTGAAAATATCAAAATCA--GAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACT--TGAGAAACTGTTGAACAAGTGTGAATCAACCATCACATGTTAAAAACAGGTTTTCTTGGGTCCTTC-TGGGTGTGGAACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCA------GTCACTTCCGGTGGAAGTAGAGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTGGTCGCTGATGATCTCCACCAGCATTGCGGGGAACTCTACCTTCAGCGCATGGGACTCTCGGAAGGTGTAGAAGCAGAATTCCAGCAGGTCGCTCACCAGCTGTAACACAGA chr4 + 94230402 33248825 33248824 33251670 33248825 33248824 33251670 2846 AATGAATGGTTTCATAAACAACAGGTGATTAAAGTAAAGGATTTATTATAATCTGCTTACAGTTGTTTGCAAAGACAGACATACGTTTTTGCATAAAGATATAAATTGCTT--TTTAAAACTAATTTAGTGTGTTT---AATTATATGAAGTTTCTGTGAATTATGAATTGTACCAAACCAAGATT---AAAAGTAATAAGGTACAAAAATAGGAGCAAACAGACAACAATTTGGACTGGGACAGGCATTTAACAGTGAAGTGTAGAATATGGCTTTGCTATTTTAATCAAGCAAAGTTACTCTGAGACAGAAAAGGAGGCAGTAACTTTGTTAATATAAAAAGCTGCTGCAGACTGTATTCACCCAGAACCTGGCTTTG------AAATTTTCTATTTTAGACTCaaaaataataataataataaaaaaaaaaaaaGGTGAAAAGATGGATGTATGA-----CTGTTTCTTTACTGTAAACAACCGGTCTGCATGCTGTGTATCT--CACGCTGGAAGTTTGGCTTTCATATTGCTGTGCA--------GGTCAGTATTTAAAGATCTGCCTATGAATTAGACTTCCAAAAT-GCaaataatatatgtatgtatatatttatatataaaaaaC----CTCTCTGAATACAGTCTTTACAGGTTACCCATTGCATAAGGCAGGTGTCATTTAAAAAGACAAGTAGCACTGACTGTCTTCAGTGCACCAAAGCACACCTCAAAATTTGGAATCAGAAAGGGTACGTAACTCCTATTGGACCACTGTTTCAAAGAAATGCTACATTCTGACTGGTCAAGGGACAAATCATAGCTCAAAAACATCAGTGTCACCCAGAGAGAACACTACAGATT--AGGACTCAGAAAA-AACTACTCT-ATTTAAATTAGCATACGGTAGCAACAGTTGAGCCTCA--------GAAAAGTTCATCTGTCCTCTATTCTACACCAAAATTTTGTATTCATTTATAAATTGTGAAAT---AGTGTAAATCACCTCAAAAAGGTTT-TGTTCACAGTCTCGTCCTAGAGAAAA--------------CGTTGTGAGACAAAATCAGACC---GAGCTGAACGTGG-AGCGTCAACGGTTTTCTTTTCCGTGTGTTCTGA---TTATTACAAAAAGT-----CATACAAAATTAAATGCGCTTTGAGTTTACCGCTAAAAATTCTAC----------TCTGCTGATCT----GCCCTT--ATCGGTACCTTGCCA---TCGCTCTTGCTGGTACTTACTGTCATGATCTGCATGTTCCCTTCATCGTAATCAGAAAT-------TGTTCTCCTCAATCTGAAATAATAATCTGACCTTCAA-----AGACGTTTCATGTATCCAAGTATTC--GAAGGAAAAAAA----------AAAACACAAAAAAACCAACACAATTTGGGAAACATTAA-TTAAAAATAGCACAATCATTCAACGTCTTATCTGCCTCTCCTCCCCTGGGAGACAAAGGGAGCAGAGGGCAGGAACTCACGCTATCATTACGCTGGCAAAAGCTTTGGAGAGAC------TGTAATTTGTCTTGTTAAATGAAACCTTC-GTAAGTGGCAAACGGAACAAAGTGTCGTTTCC---TACAGAAATATGAAGCAGGATTTCCAAGATGTGCTCATCACGTACACTTGC---AAGCGAGACA------AAAGAGAGAAAAATATGGAGGAAAATAGAAAGGCTTAAATACAACCGAAAAGGTT-AAGTGTGGTTATTTACAACAGATACTATAGGAT---GGTAAATTAGATATGATGCTAAAAAAGGCACAGCTTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGAACATTTCACTTTACAAAAAAA--TTACCTTGTTTGTTTAGACAAAGATAGTACTTAAATAGTCTCCAGCAAAATAGAGTTCTTTCAAAAATACTTTCCCATTCATCCTATTAACCATTAAAGATTTTTTTTGT------CTCATTTACAAAAGTTCCTTACACCTTATTTCAGGTCCTTCACAATTTATACATACAGCAATGTACAGTACAGCAAAAGACTGCAAAAAATTATTTGTAAAGCCAGCACAATAGATACTATAAATTGATACCAGGGCATTTGTTTTCACATCTTATCCGTCTTAATTAAATAGTAAATGGACACTTAACACAGTGTATATCATCTAGGGTGGGATAACATGGGATAACAAATGCCACAGGTGGGGATAACAGAGTATTCCACACCAAATGTTCTGTTATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTA-CAAGAAAAGAATATTAATGCCCCATATTGACTTTACGTTTTATGTGCAAACCAAGGGTAAGCTTTAAAAAGTTCTCATTAGTTCTTGAACCCTTTTAAAACAAGCAAACGATACCAGAAACTACATGGCATATTTAAAACT----CCATCCGTTAAAATATCAAAATCAAAGAGTTATTGACTAGATATGGCTTTTCATCCAGAGGAACAGGAACAT-TTTCTAAGTGTTTTAGGGTTA----TGGGGTAATTTCCAAACATCTA-GGTCTTGCCAAATCCAAGTCAA--CTGTTTTCCATTCCCCAAACCCTTCATATGATTTTAGACTATTCAGAGACTGCAGAACAAGTGTAAATAG-------CATGTTTAAAATATGGTTTCTTGGGTCCTTCATGGGTGTGGAATAACACAGGGAAACTTAAGGCAAAGTTCTTGCGTTTAA--GACATTTTCTATCACTTCCTGTGAAAGTACAGGGGCTTGGCATTCCCGGATTCCACCTTTGGTAGCTGGTCACTGATGATTTCCACCAGCATGGCTGGAAACTCTACTTTCAGTGCCTGAGACTCTCGGAAGGTGTAGAAACAGAATTCCAATAAGTCACTAACAAGCTGAAATACAGA .......xxx:..xx................................:...............:x..................:...........................--...x...............x.:.---...........x...:x............:.................---..:..:....x............:.....:........---....................:.........x.-.................:...-................::x......x.x..:...x.................:.........x.......::.x.:..:..x:.......:.xx.------.:.x..:.:......x.---....x...xxx.:.------------------::x.....x..xx.x.:.:.-----.::...x...:..:xx...xx..:.................:.--:..x:.x:....x.............:.......--------x.x.x....................:.....:.:.:.::....-......--------------------...:..x:......----.:......:.:...::..:.......x...x..................x...:...::xx.:...::::..x...:x.--:...x...-----------------:....:---:....x..---------------------..x.::..xx..x....:.x.:..x:-...:..x...x--------------------------.:x:....--------......x..--..:x:.::.....-..:..x.x.-....x.x.x..:.x..--------.x.x...x:x...--------:...::..x..:..x.........------...:.xx.x....:.----------...x...---.x...x.:.:x..:....:.x::x.-....:::::.:.x.xx.x........--------------.:x..:x.:.....--....::---..::.:...:.xx-..:.:..x:.x:..x...----:.:..x....x---..x.:x.x....x.-----::..:....:.x.x.---:..x:.:::....x:.x....x....x----------...x.:.:...----...x..--:x.x.x.........---.x.x:.x.x.::.::.x.x...:.........:::.....:x.x.:..xxx:...:.:.-------:x:.:...xx:...x...:x:.xx.x....:...:..-----...x:x.x....x.x::xxx.x...--:x....:....x----------....::x:.::...---.x.::x.:.xx..:x...:..-..xxx.:.xx...xx..:.xx.:.xxx..--....:...---------:...:x.......:xx....---------..-...x..x:x.x....----x...x:.xx.::...------.x:x.:x...x....:......x......-:x:..:x...:..:xx:..:x.....:..:..---.:x..x.:x.........:.x::xx..:.:.....x:xxx.x:...xx...---.....:..x.------.x.:.:x:....:..::..:-...:........:..x..x.........:.....-x.....................x...:..::..---................x..............................................................:.....x...............--...........----.......................................:.......................................................------..............x......:....................:...............:.........:....................................:..............x....::.-....:.......:x:x...--........:.::..........:x........:..x.xx.xx.......:..x-.::x.::.:.x.x.:...:xx.:.:.:x..:-----::.:.::.:.x.x-.:::....:...x:x.............-----...::...:-------------------------..x.........---x.....:..xx.....xx.:........-:..x............................x....................................x....--:.....:......................:...................:......x........----.....:..x...............--..............................x...............-........:.:.xx:..:..:----.....x.x::.:..:..xx..x-.....:..........x.xx..--.x.:.....xxx.:.......::.x.:....:....:...--.x...:....:x..........:...x:-------......x....:.x.x...............-...........:.............................x:.xx:.:--.:..------:........x...:.....x..x........:.....x..:........x..:........:........:...........x..x..:........:.....:..x..:....................:..........::.:...:..x..x.....x..:..... 111M2D23M3D47M3D38M3I32M1I21M1I95M6D17M3I14M18I20M5D43M2D34M8D43M1D6M20I14M4D79M2I8M17I6M3I8M21I26M1I11M26I8M8I9M2D13M1D9M1D16M8I13M8D24M6I15M10I7M3D25M1D26M14D14M2I6M3D13M1D18M4I11M3D14M5D15M3I27M10D11M4D6M2D15M3D59M7D37M5D25M2D12M10D14M3I21M1D29M2I8M9I20M9I2M1I15M4I15M6D29M1D32M3D51M3D10M6D20M1I34M1D33M3D101M2D11M4I95M6D128M1I19M2I53M1I31M5I13M1I28M5I9M25I12M3I28M1D74M2I65M4D24M2I46M1D21M4D22M1D22M2D40M2I28M7D31M1I49M2D4M6I169M 2019/2600 77.7% 2846/94230402 0.0% 419/2600 16.1% 114829914 75384641 +13862 chr4 + 190214555 148114088 148114087 148114279 192 GAGGGGCTCTACTCACGTCATGCATGGAGTCCAGCAGCTTGGTCAGTTGGTAGAACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTTAGTTACCATCTTCCTCAGTTCTTTGATGTAATTTGTCCTCATTTCTTCAAATGCAGCCTGGCTTTTGAGGCCATCCTTTGGAACTGTGTTAAGGAAAACAG chr4 + 94230402 33261197 33261196 33261388 33261197 33261196 33261388 192 GAGGAGTTATACTTACATCATGCATGGAGTCAAGAAGTTTAGTCAGTTGGTAGAATCTCTGCCAGCTTTGCCCAGAGTTACTTGGACATTTAGTTACCATCTTCTTTAGTTCTTTAATGTAATTTGCCCTCATTTCTTCAAATGCAGCTTGGCTTTTGAGACCATCCTTGGGAACTGTCATTAAAAAGACAG ....:.:.x....:..:..............x..x..:..:..............:...........:........:..::.x.....:...............:.:........:..........:.....................:...........:........x........xx.x.::..:.... 192M 163/192 84.9% 192/94230402 0.0% 0/192 0.0% 114852891 75361664 +8887 chr4 + 190214555 148116277 148116276 148116511 235 TATTACT-TATATATTATTGCTGTAACTGAAATATATTGTACCAGTTTCCCAGCCAGATTTTTTAGAAGTTGAAACAAACCCACAAATAAAGAGAACTTAAGCAAAACCTCAAATTTTGGAGTTCTGCCCAGAGTTTCTGAATTTACTTATTAAATGCAGCAGAGCTGCTGGAAATCATCCAAAATCTG------GAGAAGAGCAAAGAGACAACTGGGGTAGAAGTCTGTCTGCTTTCCTC chr4 + 94230402 33263003 33263002 33263239 33263003 33263002 33263239 237 TACTACTATGTATTTCAGTGTTCTGTCTGAAAATTATTATACCGTCACTCCGGCCAGATTATTAAGACAGAAAGAGAGACC-ACAAATAAAGAGAACTGAAGCAAAACATGAAATTCTGGAGGTTTGCCCAGTGTTTCTGATTCTACTTATTACATGCAGCAATGCTTTTGGCAAGTTCCCAAAATCTACGGTCTGTGGAAAGCAAA-AAACAATTGAGTTGTAA---TGTGTGGTTTCTTC ..:....-.:...x.:.x..:.x.:x......xx....:....:x:x::..:........x..x...x:xx:.:.x.:...-................x.........x.x.....:.....x.:.......x........x.:.........x........:x...x:...x..x:x:.........:------.x.:.:......-.:....:..:.x.:x..---...x..x....:.. 7M1I73M1D107M6I12M1D17M3D14M 169/230 73.5% 237/94230402 0.0% 12/230 5.2% 114853274 75361281 +10576 chr4 + 190214555 148120149 148120148 148120320 172 TCAATTTACTTGTGCTTAGTAGCAGCAAAACTTTCATGATGGTGTATTCTTCAAAGGTGAGCTGCAGTCGAACGAACTGAAGGCTGATTTGGTGCATCCCCTGGCATAGTTCATACATGGCAGACTGATGCATCTTCTCTCTGCAAAGGAAAAGAAGAAAATGTCTGAGAAT chr4 + 94230402 33265187 33265186 33265358 33265187 33265186 33265358 172 TTAACTTACCTGTACTCAGCAGCAGCAAAACTTTCATGATGGTGTACTCCTCAAAGCTGAGCTGCAAGCGAACGAATTGCAGACTGATCTGATGCATCCCCTGGCACAGTTCAAACATTGCAGACTGGCGCATCCGTTCCCTGGAGCGAGAAAAAAAAGAAATCCAGAGGAT .:..:....:...:..:..:..........................:..:......x.........:x........:..x..:.....:..:..............:......x....x........::.....:x:..:...x.:x.::...:..:.:..xx:.x...:.. 172M 134/172 77.9% 172/94230402 0.0% 0/172 0.0% 114854962 75359593 +3079 chr4 + 190214555 148130791 148130790 148130837 47 TTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTTTT chr4 + 94230402 15058714 15058713 15058760 15058714 15058713 15058760 47 TTTTTCTTTTCATGTTTTGTTGTGTTTTGTTCTTTTTTTTTTTTCCT .....:..x.:x.........x.........:............::. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 133072077 57142478 +3194 chr4 + 190214555 148133069 148133068 148133146 78 TATAGTCCCAGCTACTTGGGAGGCTGAGCTGAGAGGATCACCTGAGCCCAGGAAGCTGAGGACGCGGTGAGCCATGAT chr4 + 94230402 76033211 76033210 76033285 76033211 76033210 76033285 75 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGCTTTGG--GCTGTAGAACATGAT .:....:...........::.........:xx.x.:.x...:...:....-......xx..--..x..:::x...... 50M1D10M2D15M 56/75 74.7% 75/94230402 0.0% 3/75 4.0% 72099858 NA +3323 chr4 + 190214555 148134537 148134536 148134670 134 TGATAAATGATTTGTTGGTTTTTTGTGTTCATTGCTTAGAAGCAGTGAGTGTTAAGGAC--AACACCTTAAAAGTGTTAGCTCCCTGTGATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTAGA chr4 + 94230402 56805043 56805042 56805175 56805043 56805042 56805175 133 TGATGTAAGATATATTAATCATGTTTGTTCATAG---AAAATCTTTTGGAGACAAATACTGAATATTTTAAAAATATCTACTCCTTAATTTTCTACTCCACTGTCTATTTCTTTTTCTTTTCTTTTTTTTTTCAGA ....:x.x...x.:..::.:x.x.x.......x.---.:..x.xx.x:.x.x:..:x..--..:.::......:.:.:x:....:.:xxx....x:::.x..x...x.:.:.....:....:..........:... 34M3D22M2I75M 83/131 63.4% 133/94230402 0.0% 5/131 3.8% 91329494 NA +3434 chr4 + 190214555 148134620 148134619 148134658 39 TGTGATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554018 6554017 6554056 6554018 6554017 6554056 39 TGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ...x................................... 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% 141580602 48633953 +3720 chr4 + 190214555 148136053 148136052 148136120 68 TCTCAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAACACCACCAAAACCAACAAAAAAAACAAACAA chr4 + 94230402 67596939 67596938 67597006 67596939 67596938 67597006 68 TCTCAAAAAAAAAAAAAAAAAACCCAACAGAAAAAAAGCCAACCGAAACCAAAACCAAAACCAAGTAA ......................xx...x.:.......xx.x...:.......x.xx....x...::.. 68M 54/68 79.4% 68/94230402 0.0% 0/68 0.0% 80539114 NA +3111 chr4 + 190214555 148136059 148136058 148136132 74 AAAAAAAAAAA----AAAAAAACAAAAAAAAAAAACACCACCAAAACCAACAAAAAAAACAAACAAAAAAACTTTGTC chr4 + 94230402 14362591 14362590 14362668 14362591 14362590 14362668 78 AAAAAAAAGGAGCTTAAAAATGCAAAAAGCAACAACAACATCAACAAAAACAAAAAAAATGAAATAAAAAACTGCATC ........::.----.....x:......:x..x....x..:...x.xx...........::..xx........x::.. 11M4I63M 55/74 74.3% 78/94230402 0.0% 4/74 5.4% 133773468 56441087 +3002 chr4 + 190214555 148136060 148136059 148136120 61 AAAAAAAAAAAAAAAAACAAAAAAAAAAAACACCACCAAAACCAACAAAAAAAACAAACAA chr4 + 94230402 5616880 5616879 5616940 5616880 5616879 5616940 61 AAGAAAAAAAAGCAAAAAACAAACAACAACCACCCCCAAAAACAACAGCAACAACAAAAAA ..:........:x....x.x...x..x..x....x......x.....:x..x......x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 142519180 47695375 +3051 chr4 + 190214555 148136064 148136063 148136110 47 AAAAAAAAAAAAACAAAAAAAAAAAACACCACCAAAACCAACAAAAA chr4 + 94230402 33030039 33030038 33030085 33030039 33030038 33030085 47 AAAAAGTAAAAAAGAAAAAAAAAGAAAACCACCACCACCAACAAAAA .....:x......x.........:..x.......xx........... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 115106025 75108530 +3678 chr4 + 190214555 148140405 148140404 148140476 72 GTGCCTGTAGTTCCAGCTACTTGAGAGGTTGAGGCAGGAGGATTGCCTGAGCCCAGGAGATTGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x...................:...:....x.xx.x.:.x::.:...:.....:..x..x:.....:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 72107199 NA +3231 chr4 + 190214555 148141423 148141422 148141462 40 CTCTCTCTCTCTCTCCCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...........:.......x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 72893374 NA +3445 chr4 + 190214555 148141425 148141424 148141464 40 CTCTCTCTCTCTCCCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.........:.......................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 72893376 NA +3129 chr4 + 190214555 148141427 148141426 148141488 62 CTCTCTCTCTCCCTCTCTCTCACACACACACACACACACACGTATTTTGCTAGACACTATGG chr4 + 94230402 12601304 12601303 12601365 12601304 12601303 12601365 62 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTATTGCTCTGTCCACTATAG ...........:.......x.....:..........x.xxxx....x:x..:xx......:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 135540123 54674432 +3231 chr4 + 190214555 148141427 148141426 148141466 40 CTCTCTCTCTCCCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.......:.........x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 72893378 NA +3194 chr4 + 190214555 148141429 148141428 148141464 36 CTCTCTCTCCCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........:...............:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 135540125 54674430 +23590 chr4 + 190214555 148151823 148151822 148152647 825 AACATAAATAAAAT-GTGCTAATGAGGAATGCAAACAGTATTAAAATGTAAACTTAAAATAGGAAGGAATTTGTGGCCAAAGAAAAACTGATTAC------GATTCTTTCAGTCTTTTAAAATGCATCATAAAACTAAAAATGTTTTGCTACAGAATAA-CAGTTTGGCTTCTTTTATGATGGCAAAGAAGGGTAATTAC-GATTGTCATGAAAACACATTGAGCAGCTGTATACTGTTAACAAAAGAACCATTATATGA--GCTCGTAAAAG---------------------CTGGCACTTTATATATTCACATTTCCTAGAAATTAGATTGTCTTCCCAATTGGAGTCGATACCAAAAGAGACTGTTTTCTATTAATTGTGGCTTTGTACCAGTCAATTTTCAGAGCCAACTGGATCATCTTTCTTTTGGGATATATCCCACATATTATTATGTGGAATTTATATATACTGATTTATATACACTCAGAAGCATACAGTATAATGTTGCAAAGAGTAATTTTTTAAGTTCCCAGAGATCTGTAAATTTTTAACGTTAAAAAATGCCAGTTTCAGTAGATTCTTTCACC------AACGTACATCTGTTTAGAAATTACTGAAAG--AAATCATAAC-GCATAACTCTGC-AGTTTATTTTATGAAGGCTAATTAATAGGTACTTACTCATTAAAGACTAGGTCTGGTGCAAAATAGAGAAATTGGCTGTTCGTATGTTTGTACGATCTCCAGCTCAAGGCAAATGATGATAGACACATCCAAGAATACTGGATTAGGGTAATTTGGTCCTCAAGAGGCAAGTTTTTAAATCCTGAAGAACAAAACAATTAATCACAGAAATACAC chr4 + 94230402 33280262 33280261 33281049 33280262 33280261 33281049 788 AACAGAAATCAAATTATGCTCCTCA--AAGGCAAA--GAACTAAAACACAAATTTAAAACACTAAGGAATATACATATGCAGAAGGAATGGTTCCTTGGTTGATCCTTTTTTTTTCTCTAAATGCATCATAAAAAAAGTTATGTTTCATTACTGAAAAAACATTATGGCTTCTTTCACAATTGCAAAGAAGGGTAATTAAAGACTGTCAAGAAAAGTCATTGAACAGCTGTATATTCTTAACAAAAGCACTATTATATGACTGCTCTGAAAAAAAAAAACAACAACAAAAAAACCTGGCAATTTAAATGTTCACATTTCCTAGAAGTCAGATACTTCTCCAAGCTCCAGTAGATACCAAAAAATGCT--TCTTTATAAATCTCAGTTGTGCATCAGTTATATTTCA-AGCCAGCAGCTCGTTCCCAGTTTGTGAACACATCCA----------------------------------CATATGCAAGGAGAAGTGGATGGCA----GTAGCAGAGCTTCACTAATTGAAAACTGAGG-----------------CACAGAAAAATGT---TTCTAGCTACTTCTCGAACTGGGATTAGCTGAAATTTTCTTAGA-----CCGAAAACCAAATAAAGACAGAGTAATCCTTCCAGCTTGAACTGAAAAGGACCATTAAGGAATACTTACTCATCAAAAATCAGGTCTGGAGCAAAGTAGAGGAACTGGCTGTTTGTATGTTTGTAGGATCTCCAACTCAAGGCAAACGATGACAGACACATCCACGAATACTGAATTAAAGTAATTTGGTCCTCGAGAGGCAAGTTTCTAAATCCTAGAGAACAAAACA---------GAAAATACAC ....x....x....-:....xx.x.--..x.....--.x.:.....:::...:......:.xx.......x.:::xx::x....::.x..:..x.------...:....:xx.:.:.:x...............xx.:xx......:::...x...x..-..x.x..........:.::..x.................x-..:.....x.....xx......:..........:.x..........x..:.........--....xx....:---------------------......x....x..:................:.:....xx.::...x.::.xx...x..........:.x:..--.:.:...x...:x::.:.x..:.:....:.xx.....-.....:.x.xx:xx..::xx...xx.:.:.:....x----------------------------------:....:..xxx.....::x.::.:.----..x...:..xx.x.:.xx..:.:xx.:x..:-----------------.::x:.......:---..::..:x:x....:xx..:------.:.xx.x..:.x:.....-----.:....:--....x.x:..-.x:...::..x.-..:..:xx:.:x:....x:x.....x:::...........:...:.::........x.....:.....:..:........:...........x........:...........:.....:...........x........:....::..............:............:........::...........---------::........ 14M1I10M2D8M2D58M6I58M1I40M1I59M2I11M21I73M2D37M1D36M34D25M4D31M17D13M3D20M6I18M5D7M2I10M1I12M1I196M9D10M 534/746 71.6% 788/94230402 0.0% 121/746 16.2% 114871561 75342994 +21293 chr4 + 190214555 148154544 148154543 148154910 367 ATCCTACCTGGAAGTACCTTTGCCCACTTCACGACTTGGATCATCTGTTTGCCTGCTAAGCGGTTGAGCGTGGAGAGCAGATTTTCGGCTGTATCTGGTTTTGAGCTGTCATAGCCTGCATATACAATTTCAGGTTCAATGTTTTCAAGGACCATAACGGGGGAAGGTGTGAGCGCTCGTGAGATTGTGGAGAGCTGAGGAACCAGTGCTGTGTTGACCGAGGGTTCTTTTGCAGGAGCGATGTACGTTGTCCCTTCCTCTGGGCTTTGCGGGGGTGGGGGTGGGGGTGGGGGCTGCTGCTGCTGTGGCTGCTCCTCGTGAATCCCTTTTAACTTTCCCAACTTCTTTGACTTTCGTGCTATAAGAA chr4 + 94230402 33281430 33281429 33281784 33281430 33281429 33281784 355 ATCCTACCTGGAAGTATCTTTGCCCACTTTACCACCTGAATCATCTGCTTGCCAGCCAGGCGGTTTAAGGTGGAAAGCAGGTACTCGGCTGTGTCTGGTTTCGAGCTGTCATATCCTGCGTACACGATCTCCGGTTCAATGCTTTCAAGGATCTTAACAGGAGAGGGAGTAAGTGCTGGTGAGATGGCAGACATGTGGGGGACAAGTGCTGTGTTTACAGGGGGCTCAGTTACTGGAGCGATGTATGTCGTCCCTTCCTCCGGGCTTT---GGGGT---------GGCGGCTGCTGCCGCTGCTGTGGCTGTTCCTCGTGCATCCCTTTCAATTTGCCCAGTTTTTTGGACTTCCGGGCTGTGAAGA ................:............:..x..:..:........:.....x..:.:......x.:x.....:.....:.x:........:........:...........x.....:..:..:..:..x.........:.........:.x....:..:..:..x..:..:...x.......x.::..x.xx..:..:..x...........x..x.:...:..xx..:.x...........:..:...........:.......---.....---------..:..xx.....:.............:........x........:..:..x....::..:..x.....:..x...:.:.::. 268M3D5M9D82M 282/355 79.4% 355/94230402 0.0% 12/355 3.4% 114873114 75341441 +10566 chr4 + 190214555 148194525 148194524 148194896 372 GAAAAATTCACTAGAACTATAGCCATAAAACAT--ACCTCTTTTTGACTCCAGCTAATAAATATTTCTCTTCTAAAA-TGTTTTAGCATGAAAACAGAACTCATCAGATTTTCAGAAACCTTTGCTCCCTGTTGGCTTCGTTTTCAATTTT-GAGAGTACACAGATCTTAGTGCTGTTGCA---TTACCTATTAACAATTTTT-------ATTAAACTAAAAATACAAA-------------ACTTACCTCCTAAATTCATTCCAGCTTGAAGACATTTCTGAAGTCTGCAAGCAGGACAATTCTTTCGTCGAATCTTATCAATGATGCAATCATTTCTTCCAGCACATAAATAGTTGTGTTGCCCTGATTAAA--ATAATAAAAAATAACTGTTAAAATA chr4 + 94230402 33303010 33303009 33303399 33303010 33303009 33303399 390 GGAAAATT-------ACTGTCATCATAAAACACCCACTTTTCTTTTTTCTGAGCCATAAAATACATATCTCCAAAAGCTGATTTAGAATGACAATAGAGTTTATTAGCTATTAAGCA----CTTCTTCAGGATAATTCCACCTTAAACTTCAGAGATTGTGCAGCTGCCAGAACTATAAAAAGGCTGCACATTTCCAATATTTTTGCCTAATCAAATTAAGAGACCAAACTATTAATATTCTACTTACCTCCTAGATTCATTCCAGCTTGCAGACATTTCTGTAATCGACAGGCTGGGCAGTTCTTCCTCCGAATCTTATCAATTATGCAGTCGTTCCTTCCCGCACACAGATAATTATGCTGTCCTGAATGAACCAAAACCAAAATGCATTATTAGACTA .:......-------...:.x::.........:--..:.:.:...xx:::x...:.xx.....:x.x...:.x...:-..x.....x....x..:...::.:..:..x.x..x..x.----:.x..:.xx.x.:::.:.:::..x..:..:-....x.:::...x.x::..x:..:.x:x.---:.:.x:...xx....x...-------..:...:...:.:xx....-------------............:...............x...........x.:..x:..:..x..:..:.....:.x:..............x.....:..:..:.....x.....:.:...:..:..:..:.....x.:..--.x..:x....xxx.:.:...:.x.. 8M7D18M2I42M1I39M4D30M1I29M3I19M7I19M13I132M2I25M 246/361 68.1% 390/94230402 0.0% 40/361 11.1% 114891515 75323040 +13880 chr4 + 190214555 148203405 148203404 148203671 267 TTTTCATTTTTAAAGATCCATTTGTTGTCCTGCTGCAAGATT----------TTTTTTTTTTTTTAAGCAGTTGACAACTGCCCAGCAACAGCAGCCTGTGTTTGCAGTCACTATTTTGGGCTACATCACATGTCACTTACATAACCTTGTTTAACTGCTCTTGAACTGGTTCGAACAACCTGGGAAACAGATTAGAGCAGCCCCAGCAAATTCCCGCATTGCAGATTCTGATGGGCGATTTCCCTTCCCCCATCCCTCCCCCCGCCCCGCCCCCGT chr4 + 94230402 33309836 33309835 33310104 33309836 33309835 33310104 269 TTCTCATTTA-AAAGGTCCATTTGTTACACAGTTGAGGGGTTGGttttttttttttttttttttttAGCAGTTGACAACTGCCCAGCAACAGCAGCCTATGTTTGCAGTCACTATTTTAGGCTGCATCACATGTCAATTACATAACCTTGTTTTACTGCTCTTGAACTGGTTCGAACAACCTGGGAAGCAGATCAGGGCCGTCGC-------TCCCGAGCTGCAGGCCTGGAGCAGATGCAGCCCCCTCCCCACTGCAGCCACGGCACTGCCTCGGT ..:......x-....:..........::x.x.:..x::.:..----------.............x................................:...................:....:............x................x.................................:.....:..:..x.:.x.-------.....x::.....::::x..xx:.xx::xx...:::.....::x.xx..x.x..x.:...:.x.. 10M1D31M10I153M7D65M 204/259 78.8% 269/94230402 0.0% 18/259 6.9% 114893569 75320986 +3413 chr4 + 190214555 148234553 148234552 148234625 73 TGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.:.........::........x.xx.x...x::...........:.:x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 72201348 NA +10346 chr4 + 190214555 148259974 148259973 148260197 224 TTACCTTCCACTGCTCTTTTGAAGAAAACTTTGCAGCTGCCACAGGTGACTACCCCATAATGGCATCCTGAAGCCTCATCCCCACACACCAAACATATTTTTGAAGGTCTTGAAGATCCAGTAGAAACACTTCGTAAAGTAGAGCTGGGGAAAG-------AAATTGAGATTTAAATAACTACACCGTAAAGGCACATTTAACATGCTGCACAGCTTAGCTCAAAATTTGT chr4 + 94230402 33336426 33336425 33336651 33336426 33336425 33336651 226 TTACCTTCTACAGCTCTCTTGAAGAAGACTTTACAGCTGCCACATGTAACTACCCCGTAATGACATCCAGATGCCTCATCTCCACACACCAAACACACTTTGGAAGGCCTCGAAGAACCAGATGATACACTTCTCAATGAAGAGCTAGAGAAGAACAGAGCAAAGCAAAAGTT--ATGAATATTTC---AAATCACACTGGCCACAATGCAAAGCTCAATTAAGAATTTAT ........:..x.....:........:.....:...........x..:........:.....:.....x..x........:..............:.:...x.....:..:.....x....xx..x.......x:..x.x......:.:...::-------...x::.:.x..--..:.x..:x:.---..:x....:.x:x..::x....x....:.::.x.:.....:. 154M7I12M2D11M3D42M 164/219 74.9% 226/94230402 0.0% 12/219 5.5% 114923548 75291007 +3748 chr4 + 190214555 148285576 148285575 148285687 112 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTGAACCCAGGAG---------GCAGAGGTTGCAGTGAGCCAAAATTGTGCCACTGACCT----CCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGAC ....:.x......:.........::::.....:..x.xx.x...x.:...........:..---------.:...:xx..xx.:x.:x..:.xx......x:x::...----.....x....... 61M9I38M4I13M 78/112 69.6% 125/94230402 0.0% 13/112 11.6% 72252372 NA +3537 chr4 + 190214555 148308832 148308831 148308925 94 AAAAAATTAGGCATGGTGGCACATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGAAAGGTGGAGGTTGCAG chr4 + 94230402 76033186 76033185 76033277 76033186 76033185 76033277 92 AAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::..x.x:..::....::..:.--...:..:...........::........x:xx.x.:.x.......:..:::...x.xx:..:..:.. 25M2D67M 61/92 66.3% 92/94230402 0.0% 2/92 2.2% 72275646 NA +3148 chr4 + 190214555 148326404 148326403 148326465 62 TAAATAAATAAATAAATAAAATAAAAAATAAAAAATAAATATTTTTGAAGCATCTGTATAAG chr4 + 94230402 80164662 80164661 80164723 80164662 80164661 80164723 62 TGAATAGATAGATAAATACAATAAAAAATAATAGATAAAAACTTTCTAGTCTGATGTATAAG .:....:...:.......x............x.:.....x.:...:x.:x.xxx........ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 68161742 NA +15632 chr4 + 190214555 148344779 148344778 148345368 590 ACATTATCAAGAGTT------GCATCTCTGC-----TGGATTTGAATCTAATACTGTAAAG------AAGAGTAATTAATCCATTAAACTATCCTGT--TCCTTTAAACATTATTCCAAGGCCATATAGAATTAGCAATTCTG--CTTGTTTAC----------TTTCCACTGACTAG-CAGGG-------GATTAAAGACAAATTCAAG--------------------TTGGTTTTCAGATGCACAAAATTAAAGG-----TTGA------GAAAACTTGGTGTTTTCAAAGCATGCATCCATGAAGGATTTCTTTTTAACTGTT-----CTTTCC---AAAACTTTTAAACATTCAACAAAAT---CTCAATTTGCTTTGCTTTGTTCTTTGCTTCCAAATACTGTAAATGGCTGGATTCCAGATAGAGTAGTTATCCTCAAATGCCTTCCAAAAAGGCCTGCCAGATTCTGTGGTTCAGAAGTAATTTAAAAGTAGAAATGTGTAACAAATGAGACCTAATGGAAAACACTGGATATTTTAGTTAGTTTTTTTTTAATTTCAGAGAGAGACAATACATATACACACGTGCACATGAACATATATAAACACAGACCCATGTAAATAAGACAGAAAATGAAAAATGAGGTGGC--AATGTTGTATTTCTCT chr4 + 94230402 33387058 33387057 33387690 33387058 33387057 33387690 633 ATATTATTAAAATTTCTATTTGCATTTTTTCCAGTATGGAGCTTAAACTGA-GCTGAAAAGTTGCATAAGCTTGATTAATCTATTAACCTAGCCAGTCCTCCTTAAATCGCTTCTTCAAT-TCATCTGATGTTAGCAGTTCTGGCTTTTTTTACATGTACCTAATCCCCAACAATTAGATAAGGAATGTTAGATTAGGGACACTGTGAAGGAAAAGCCATTAAAAAGGTCTTTGTTTTCAGACAGAGAAGGTAAAAGCATTCCTTGATGCAATAAAAAGTGAGTATTTACATACTATGCCTTAATTAAGATTTTTTTCTTTATTTCTATTGGCTTCCCTGGAAGAGCCATAAACATTTAGTAAAATAATCTCAATTTATACTGCTTTGTTCTATGCCTTCAAGTACCGTACATGGCTGTACTCCAGATCAAGTAGTTGTCCTCAAATGACTTCCAATGAGTCCTGCCAGATTCTGTGGTTCAGAAGTAATTTAAAGGCAGAAAGCTGTAGCAAATGAGACCTAATGGAAAACAGAGAATGCTTTAGTTCATCTTAACT--GTTTGCAGAAGAG-----------------------------------AAATGGAAAACCACG-AAGAAAGAAAGGAAAAAGAAAAGGAAGTGCCAAAATGTTGTATTTCTCT .:.....:..:.x..------....:.:.x.-----....x:.x..x..:.-:...x....------...xx.:.......:.....x...x..x..--.....x..x.::.x:.:...x-:...x.::x:......:.....--:..x.....----------.::...x::.:...-:.:..-------.....::....xxx.x...--------------------..x.........::x.x..::.x....x-----....------:....x.x:..:...x..x.x:....x.:x..x...:x...:..:..x.:.x:.-----...:..---..:.x::x........:.::.....---........::x:...........x...:.:...:...:...x.......x.:.......x:.......:..........x.......x:..x..................................:.:.....xx....:.......................xx.:..::.......x:.:..xx:.--:...xx:::....-----------------------------------...::x.:.x...:.-..:x....x..:...x::....x..:...x.--................ 15M6I10M5I15M1D9M6I30M2I21M1D22M2I9M10I14M1I5M7I19M20I28M5I4M6I54M5I6M3I25M3I189M2D13M35D15M1D31M2I16M 402/550 73.1% 633/94230402 0.0% 123/550 22.4% 114957721 75256834 +3162 chr4 + 190214555 148351105 148351104 148351167 63 TTGTTCTAACATTGATTT----CATATTCTAGGCTAATCTGTCTTTTCTTTTCTTTTCTTTTTGAGA chr4 + 94230402 59212833 59212832 59212899 59212833 59212832 59212899 67 TTTTTCCCATATTAACTTATTACAAACTCCAGGATAATTTGTCTTTTTTTTTCTTTTCTTTTTTAAA ..x...:x.:...:.:..----..x.:..:...x....:........:...............x.:. 18M4I45M 49/63 77.8% 67/94230402 0.0% 4/63 6.3% 89138272 NA +7899 chr4 + 190214555 148367377 148367376 148367722 346 AAATCAACAATGC---CATAATTTAAGTGAAAATCATAAAA--GATT--AAAAAGTTTAAAG---GTATATTTAAATGAACTTTAAAAAGTC--ATGGTATTAA------AATTCAGCTTGGGTTGAATACGAACAATGTTATCACACCTA-AAGAATTCTAGCTAAG----CAATCATGTATAAACATAGATATTAGCCTGAAATTTAAGACAGGCTGCTGGATTGAATGATGAGACCATCAGATTGAGTTCTTCAGTTCATTAGCTTAACCACAATCCCAACCTAATATCCATAAAATCACAAAGGCAAGTGTAATATACC-TCCTAAATATA---GAACTACACAAAAATTTGTCATTATTCAAGAAAGA chr4 + 94230402 33400473 33400472 33400822 33400473 33400472 33400822 350 AAATGAACAGTGAACGTATAATCACAGTGAAATTAAAAAAATCAATTCTAAAAAGATAAAAGCAAATTCTTTCAAATAAA----GGAAGGTCTCATTTGATTAATTACCAAATTCACTCTGTGTTTGATACTAAAAATTTTGCAGTACCGAGAAGCATTCTAGGTAAGTGAGCATTCATGTGTGAGCAGCGAT--TAGCTAAGAGTTTCAGACAGGCTGGTGGGCTGAAAGATGAGATCATCAACTTGAGTTCCTCAGCTCATTACCTTTGCCACTATCCAAA--------CCATTAAGTCACAACTGGAAAT---ATATACCATTCGTAATATAAAGGAGTTGCAC------TTGAGATTACTTGAAAATGA ....x....:..x---:.....:xx.......x.x.x....--:...--......x.x....---:.x:x..:....:..----::..:...--..xxx.....------......x::..x...x:....x..x...x..::x::...x.-...x.......x....----..x......:.:.:..xx...--....:x::.:...x..........x...::....x.......:.....:x........:....:......x...x:....x....x..--------....x..:......xx.x..:.---.......-.:.xx......---..::.:...------...xx....:.::.:..x.. 13M3I25M2I4M2I13M3I15M4D8M2I10M6I41M1I16M4I21M2D88M8D22M3D7M1I11M3I9M6D20M 236/323 73.1% 350/94230402 0.0% 50/323 15.5% 114966904 75247651 +13363 chr4 + 190214555 148376114 148376113 148376494 381 AAAAGAAATCTATTCAAGGTCAGGAGTAAGGCAAAAAAAAAAAAAAAAACCCACGACGACTGGGCATT------TTAACCA----------------CAACAACTGTTTTTCTCTCTTGCCATAGATGAAACTCTTTGGTGTAGAAGGAGAAAGTAAATAAAAGGAAGGAAGAACTGTAATTCTTGAGCCTGTGCCAGTTTACAGTATTTAAAAAAAAGAATCTGCGCCACAGCTTGGCAGTTGGCCATATTTACAGTAAGCTATCTAGTGTTTTGCCCAACAGGAAGAACAAAGGGCTCAGTGTAGTGCTGCTGGTTTTGTGTGTTTCAAATA-----TTGTAGAAAGAAAGAAGGAATGTAGCCCCACATGCAATAGACCCTTTCCTTTTTACATTTCTCTGTCCT chr4 + 94230402 33411133 33411132 33411515 33411133 33411132 33411515 383 AAAAGAAAT-------------GGGAAAAGGAGGCAAAAGAAAAACAAGCTGATAACTCTTTGTTATTCAACGATTAATCAATATGAAACCTTCACTCAACATTTAACTTTCTCTT-----ATTTACTGAACTCTTTAATACAGAAGG-GAAAGTAAATAAAAGGAAG----AACAGCAATTCTTGATTTCTTGCCAGTTTACAGTATT--AAAAAAAGAATCTGCGCCGCGGCTTGGCAGCCGGCCATATTTACAGTAAGCTATCTACTGTTTCACCCGGCAGGAAGGACAAAGGATTCAGTGTGGGGCTGCTGCTTTTCTCTGTGTCAAGCGTACCCTTCAAAACAGAGCACAGGAATATTAAACTGCGTGCAATTAAGCCTGCATTTCTCATGGTTTTTCCTTCT .........-------------..::x....x::x....:.....x..:.:x.::..xx:.x.x:...------....:..----------------.....x:.:x:.......:-----..xx.:x:........::.::......-...................----...x.:.........x:::x.................--..................:.:.........::.........................x.....::...::.......:.......::.......:.x.......x....x.x...x....:::-----..xx.:.x...:x:x......:.x:xx.::.:......x:.x...x:x:..:.:.::x..:.::x.:.. 9M13D46M6I7M16I19M5D27M1D19M4D37M2D123M5I69M 259/356 72.8% 383/94230402 0.0% 52/356 14.6% 114964981 75249574 +20922 chr4 + 190214555 148385158 148385157 148385581 424 TCTGAGAAATAA----AATACCATCCAAATG-AATGAATAAATTCCCAAGTAAACAGACT--TATCACATCACCATTATATAATAGGAAGAAACTCTATGCATCATGTAGGTCAT-CTAAAATGCTTAGTGATCTCATTCTTACCATAACAAATTATCTGCCAGACAA-GACCTTCAAGGTCAACCCTGGCAACAATTAAAAAATAATGAAAAGCATTCATCCCTGAGGTAGAGTTAGAATGTTTTAGTTTGAAGCAATGTGCTGTATATTTTATTAGCTATAACTTGCTTAATTATTCATTGTGACTCCTCTTATATTCCATACAGAAACCTCAGGTTGCTCAGATTTCTAACTGAAATCTTTTTTTCTTATTCAAGGGCAAATGC--CTTAAGAGACCAAAATTTTTGTCCACCATTTTCAACTGAACACAAA chr4 + 94230402 33420899 33420898 33421325 33420899 33420898 33421325 427 TCtaaaaaataataataataattactaaatatGGAGAGCAAATTCCTAAGAAAACAAACTCTTACTACATCAGCATTCTATAATATTAGGAAACTATTTGCATCATGCGGCTTGTGCTAAAATGCTTAATGATCTCATCCTTACCATAACAAATTATCTGCCAGAAAAAGACCTTGAAGGTCAACACTGGCAACAATTAAAAAGTAATGAAAAACATTCATCCCTTAGGCAGAGTTACAATTTCTAAGTTCGAAGCAATGTGCTGTATATTTTATTAGACATCGCTTGTTTAATTATTCATTGGAGCTCCTCTTATGCTCCATACAGCAACCTCACATTGTTAGGATTTCCATTTGAATGCTATTATCA--ACTCAAGGACAAATGTCGCCTAA---ACTTGGACTTCTGTTTGTGTTTTCCAA---AACATAAA ...:.:......----....x:xx.:....:-::x..::.......:...x.....:...--..::......x....x.......xx.:......x.x.........::.x.::.-............:.........:..........................x..-......x.........x.................:.........:...........x...:.......x...x.:.x....:...........................x:..x:....:..............x::..........::.........x.......x:...:.x:......:.x:....xx..x..x.:x--.:......:......:--.:...---..:x::.:..:...::::xx...:...---....:... 12M4I15M1I28M2I53M1I52M1I200M2D16M2I5M3D27M3D8M 329/416 79.1% 427/94230402 0.0% 19/416 4.6% 114964259 75250296 +23618 chr4 + 190214555 148390787 148390786 148391578 792 AAATTGTTATAAAATACATGCTTACCTATAAAAGTAAAAAATTATGTCTGCTCATAATATGACTTTTAAGAGTGAAGTCGGGAATTTATTTTATCTGGTACACCACAGTAATTTGCTATAAAGCTTTATGAAACAGCTA-AAATAATGTTACAGCCAGAAACCAATTGTTGCTAAAATGCATTCAGTTAAAATGGAAAGTATAGGGAAATAAAACACTGTAATTGTCTCTCAACCCACATTGTATATTATGTTGCTAAATTATATACCATTATATTTTCTACATTTTAATATGCTTTCCCATAGAGGAACTGATAGCATAAGGAAATGATTCTCTG---CTTTTATTTCTGAAGACCTAAATAATATCCCACACATATTTATAAACCAAACAGGGTCTCAGCCTCTTGTTAGATCCCAAAGCTTATAAAATCTGTTTCACAGAACCATGACATGTAACAGTGCTTGAG-----TAACACAAACGGTTTT-----CTGTTCTATTTCTCACTGTGAGTCAGAA-----TTGTACATCTC-ATATTTAAAGT-----GAGCTACAATAATATGAAA----AAAATCAAGGTTTTCTTAATTTTAGAAAATCTTTTAATAGCA--TTTGTATAATTCTTACAAATACTGTCTTTGGCCTTG-----ATACTATTTTGTTTAACCTCATCCATCCA--------------------TTGAATAGTTGG--------AGCATGTAAAGTA-------GATATTTCTGCTCCCCAGAGAAAG--GAAAGAAAGCCATGGCCTTGATCCAAATTTAGCAGAATGTTGACAAATCACATA-----CTAATAAGTAATATGTGTAGTATTTAAATAAAA chr4 + 94230402 33424613 33424612 33425468 33424613 33424612 33425468 856 AAATTACGGACAAAAATACTGTTACCCACAGAAGCCAGTAGTAGGAGTTTTTCATAATGTAGCTTTCACAAATGAAGTGAAGAGCTGATTTGATCTGGTACACCACAGTAATTTGCTGCGCAGCTTCAGGAAACTGCTACAAATAGCATCACAGCCAAAACTCAATTGTTGCTGAAATGCATTCAGT-AAAATGGAAAATACAGAGACATAAAATACAGTAATTGTCTCTCAACCTACATTATATATTATGTTTCCAAATTATATAGTATTATATTTTCTAGTTTTTAATATAGTCTCCCATTGAGGAATTGACAACACAAGAGA---CTTCTCTGACCTTTTTTTCTCTGGATATCTAAATAATATACCACACAAACTTATTTGGTTTATAAGTCTCTAGCCTTTTATTACATCCCAAGG--GACAAAATCTGTTTTATAAAAACACTGCATGTAGCTATGCATAAAACAGCTAATGCAAAGTGCTTTCCTTGCCATGCTATTTCTCCCC-TGAATCACAATTTTCTTGTATATAGCAACACTTGTAGTTTATGAATTTACATGCATCTGAAAGACGAAAATTGGACTTCCAGCAA---TAGAAAACCTGTATGGAACACCCTAATATAATAACAGACAATACAAGCTATGATCCTGCACACCCACTGATTTGT---ACTTAATGGATTCAACACTCAGTGCTGCTGCCTCTTGAAAGGTTTGACCCGAGCAACGGACGAAATAACTTATCAAGCTTTCTATTCCCCAGACATTGCAGAAAGTATTTCATGGATTCGTTCCAAATTTAGGAGGATGTTAA-AAACCACACAGCCACCAGATAAGTAATTTGTGGGGCAGCTAAATCAAA .....::x:xx...x.:.:xx.....:.:.:...:x.:x.:.x:x:x:.x:.......:.::....:.x:.:......x::..::.x....x.........................:::x.....:.x.....x....-.....:::.:.......:..x:...........:.............-..........:..:..:..x......:..x.................:.....:...........x.:..........x:.............xx.........:x.:......x......:...:.:..:...::.---x.......---:....x.:....:.x.:...........x.......x.:....xx:x:xx.:.:.x::::.....:..:...x.......:.--x.:...........:.:.:..x..:x:......:.x:...x.:.:-----...::....xx.:...-----.::.x.........x.:-...:...x..-----.....:..xx.-.:.:..:x...-----:.x:....xxx..x.....----.....::::x..::xx:..---.......:..x.xx:x.:..--:.x:......xx:x:xx.....x:x..x..::.:..-----x:...:x.....---..:.x..xx..:..--------------------.....x:...x.--------.:.:x:::..:..-------:.xx.....::........x.xx.--.....x.xx:.....x:.:.x...........x..:.....:.-...:....:.-----.x:.........x....x:.:.x:.....x... 139M1I47M1D137M3D8M3I82M2D45M5I16M5I17M1D10M5I11M1I11M5I19M4I19M3D20M2I36M5I12M3D14M20I12M8I13M7I24M2I43M1D10M5I33M 546/778 70.2% 856/94230402 0.0% 92/778 11.8% 114966174 75248381 +3450 chr4 + 190214555 148406028 148406027 148406108 81 CAATGGTACCTTCCTGCAGTCCCAGCTACTTGGAAGCCTGAGGCAGGAGGACTGCTTGAGCCCAGGAGACTGAGGCTGTAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:....:.x--.x..:...:...........:...x.....x.xx.x.:.x::.....:.....:..x:.x:........ 10M2D69M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 72372829 NA +3036 chr4 + 190214555 148433433 148433432 148433507 75 ATAAGATTCTGTGGAATTTCATACAATGAAGAAAAAGAAAACTAAAAATATGAAAACTAAAAATTATAAAACAAT chr4 + 94230402 68938734 68938733 68938806 68938734 68938733 68938806 73 ATAAGCTAATGAGGAATTTCATACAACAGAAAAAAAGAAACAGAAAAAAAAGAAACCGAAAAAC--AGAAACAAT .....x.xx..x..............:::.:.........xxx.....x.x....x.x.....:--x:....... 64M2D9M 55/73 75.3% 73/94230402 0.0% 2/73 2.7% 79494699 NA +95310 chr4 + 190214555 148435098 148435097 148436888 1791 ACTTACCTTGATACATTTTCTGGAATGTATTCTAAGACCGGATACCCATCACTTCTTCTAGACGACAGGTCGCCGTGTGATTTCCATGACTCCACTAAAGTATTGACAGGAGGAAAGGAACTCAGGTGTTGGAAAGATTGGTCTCTAGCC---GATCGTGATAAAGATATTGTACCTTGAGCACCAATCCTGTAGTGGAAGGACTGTCCACCTGAATTCACCCCAACAATAGCAGAGGAAGGGATGCTGGCCTCTGGGTAATAGCTCCCATCATCTGGTTCTTGTTTAATACCCAC---------------TGGGAATCCGCTGCCTTCACAGTTACCATCAAAGCCGGGCACAGGTGGTCCTAAAATTCCTGATAGGGAATAATAGTCTTTATCATCCATAAAGGAAAAATACGAGCCATCCATAAATGGAAACGGGTTTACTGTTGGATTCCCTTTAAAAGAGGTGCCTGAACATGAATGCTTGGTTGATTCTTGCTTTATTGGTACTGAGAATGAAGAATCCGAATTTATTTTGCTATTTCCTCCTAGACATGAGCTGCTAAAAGCTCCATCTGGTTCTGGTTTTATGTACTGGACAATATTAAGCTGGCCAGTCACACCATTTGAGATGGCACTCTCTACTTCCTCAGTCTTAGGAAAAGGGACCTCTTGAGCACCTTTCTCCTGCGTGTCTGGACTGGGAACCACATCCCGCAATGTACTGGATCCAGCAGAGGTGCCAGAAGCAGTGTAGCTGAAGGCATTGTTTACAGGGCTACAGATAGA------TCCCACAGTACTGGCTGCCGGACTGGAAAGCGTGGATCTGTTATTAGTGTTCGAAGGGCTGGAAACAGAGCACCTTGAGTTGTTAATATTTGCAGGGCTAGACACAGAGGATCTCAGAGTGACATTATTGGGACTGGAGACTGGAGATTTTACACTGCAGTGACTTGGAGGGCTGGAAATTGAGGATTTCATGCTACTTAACGGACTTGAGAGAGGAGAGCCCACATTGCTAGCATGTGCAGGGCTGTGCGACCTGGAGCCTCGATTTTCAACATTAGGGGAGCATGTCAGAGGAGTTCCCTGGGTGATTGGGCTGTGCACTGGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTTGATTCCAGCAGGGCTGCAAACCGAAGATGTCATGTTCAGAGGGCTGCAAACAGACGGGCTTTTCTCATGACACATGATAGGGCTTTTAACAACGGCGCGCATGACGCCACCATTCACGGAGCTCCCAGAGTCAGACATAAATGATCTCAAGGGCGTGTTCACACAACTTAGAGTGGAAGGACGATGGCCATTTCCTTTGTAAAATTTCACCAGCTGTTCAACATTCTGATAAATCTTAGCTGGACTCATGCTTCCTTGTTGGTTCTGCTGCTCATAGGAATAGTCAGCATCTCTTACAGAATCCATATATAAACCCATGGACTCAGCTACAGTTGCTGAAAGTTCCTTAGATTCCAGCTCAGTTTTAATATCAGATGTTAAAATCCCAGGCCGATTATTGTCTTGCTGAAGGCAAGGGAGTAGTTCTTGTTTTTCTTTGCTGCTTCCTTGAGTACTGTTGTTTGGAATAGCACCGGAAACACAGCTTACGTTGACAATCTCCATGTAGTTATTCTCATCGGTCCTCTCTGTAGGTCCCAGGGAAGAACGCTCCACAGCCTGAGAAACTTGACCCCACCGTCTTTCCATATCTAGACCTTCAGGGAGACTGTGGTAGCCTTTGGTCTCCATCGCTAACAAATAAATTTACATTAAAAAA chr4 + 94230402 33443399 33443398 33445192 33443399 33443398 33445192 1794 ACTTACCTGGACACGTTTTCTGGAATGTACTCTAGAACTGGATACCCATCACTTCTTCTGGATGCCAGCTCTGAATGAGACTTCCAGGTCTCCACTAGCGTGCTGACGGGAGGGAAGGAGCTCAAGTGCTGAAATGCTTGCTCTCTAGCAACAGGCCGCGACAGAGATATCGTGCCCTGGGCACCGATCCTGTAGTGAAATGACTGTCCGCCTGAATTTACACCAACAATGGCAGAGGATGGTATGCTACTGTCTTGGTAATAGCTGCCATCGTCAGGCTCCTGCTTAATCCCCACAGGGAGGCCTGGATTTGGAAAACCGCTACCTTCGCAACTGCTATCAAAGGAAGATACAGGTGGTCCTAAAATCCCAGAAAGAGAGTAGTAGTCTTTGTCATCCATGAAAGAAAAATATGAGCCATCTGTAAATGGAAAAGGATTTACTGTTTGATTCCCTTTAAAAGAGGCACCGGAACAAGGATGTTTAGCTGACTCTTGCTTCACCGGTACCGAAAACGGGCAATCAGAACTTATTTTACTGTTTTCTCCAATGCATGCGCTACCGAATGAACCGTCTGGTTCGGGCTTTATGAACTGAACGAGGTTCATCTGGCTGTT------GTTTGAGATGGCATTCTCCATTTCCTCCATTTTGGGAAACGGGATTTCTTGAGCACCCTTGTCTTTTGTTTCTGGACTGGGGACAGTATCTTGGCTTCTGCTAGGTCCAGCCGGCGTGCTGGAAGCAGGGAATCCTAGAGAGCTGTTGACTGGGCTACAGATCGAAGATCCCCCCACAGTGCTAACCGCCGGGCTGGAGCGAGTGGACCTGTTGTTGGCATTGGAAGGGCTGGCAATAGAGCTTCTCGAGTT---CATGTTTGCAGGGCTGGACACAGAAGACCGCATAGTGATATTGTTAGGACTGGAGACGGGAGATTTCACGCTGCAGTGACTGGGAGGACTAGAAATTGGTGATTTCATGCTACTTATAGGGCTAGAAAGTGGAGACCCCACGTTGCTAACGTGAGCGGGGCTGTGCAACATGGACCCCCGGCTCTCAACGTTGGGTGATCGTGACAAGGGAGTTCCCTGCCCGATGGGGCTGTGCATAGCAAAGTTCCCAAAGTTAGCAGTAGTTGAGGACACTGAGTTAACACCAGCAGGACTACACACCGAGGAAGCCATGTTCTGAGGACTGCAGCCTGAGGGACTTTTCTCTTGACACACGATGGGGCTTTTGACAACAGTGTGCATGGCACCGCCATTCATGGCGCTTCCCGAGTCCGCCATCAGGGACCGCAGGGGCCTGCTGGGGCTGTGCAGGGGAGAGGAACAGTGGCCGTTCTCCTTGTAGAGCTTCACCAGCTGCTCCACGTTCTGGTAGATCTTACCCGGGCTCCC---------CTGGTTTTGCTGGTCATATGGGTAGTCGGCGTCTCGGATCGAATCCATATACAAACCCATGGATTCGGCCACCGTCGCTGACAGTTCCTTCGATTCTGTTTCAGTTTTGATGTCAGAGGGCAGAACAGCGGGATGGCTGCTGTCCTGCTGCAGGCAGGAGAGAAGCTCAGGTTTTTCCT---TGTTTCTTGGAGCGCTGCTGTTTGCAAAGGTGCCGGCAGCACAGCTCACATTCACAATCTCCATATAGTTACTGGCATCAGCCTGCTCTCCAGGACCTAGGGAAGAATACTCCACAGACTGAGGAACTTGACCCCACCGTCTCTCCATATCTAAGCCTTCAGGGTAGCTGTGGTATCCTTTTGTCTCCATAACTAGTAAAGACATATGCAAAAAAAAA ........x..:..:..............:....::..:....................:..:.x...x..xxx:..x..:.....x.x........:x..::....:.....:.....:....:...:..:..x.x...x........x---.::..:..:.:......:..:..:..:.....:...........:..x........:........:..x........:........x..x.....:x:x...x..........x.....:..x..:..:..:.....x.....---------------...:..x.....:.....:..::.:.:.......xx:.::.................:..x..x..:..:..:........:........:..:........:........::..........x..:.........x..................::..x.....x.:...:..:.:...:........:.::.....:..:..:.::x....x...:.......:..:...:....x.x:....x...:.::..x.xx..:........x..:......x....:..:.x:..x.x.....::x.------:............:....:.:......x:.:..:.....x....::...........:..x..:.x:..x...........:..x::...::.xxx.x.:..:.:......x.:x....::.......x.x.x.:x.::.x::....x..x...........x..------:........:..::.:.....:.....:x.x.....:.....:..:.::..x..........x..:.....x:..:.....---x..:...........:........:..:.x..x.....:...:..:...........x........:..:...........x.....:..:.......:x................xx..:..x..:..x.....x.....:......:.:..x..:.........:..x....x..:..::.:.....:..:..x..x.:..x..::...........xx:...x..........:x.x...::.x......:.:..x..:..x........x.....:.:x........:..:..x.....:..x.:.......x....:.....:x.x..x..:........x.......:...:........:.....:.:.:.....:.:..:.......:..x...:..x.....x.x...x.:x..:.x..:....x..:.x:x:.x::x:..:.x:..:.:..::.....:..::.:.....:.::...........:..x..:.....:..:......x.:..:...x:---------:.....:.....x.....x.::.....:..:....xx.:x...........:...........:..:..:..x..:.....x........x.....::x:........:..:.....x.x:.:..:xx.:..x:.::.::....:.....x.....:.:...x..:..xx.......:.---..:...:.x...::...:......x..x:.::....x.:.......:..:..x...........:......:.xx....:.:.:x....x:...x..:.........::........x.....:..................:..........::.........x::........x.....x........x:...::...x.x..x.:..xx...... 150M3I143M15I306M6D165M6I81M3D528M9D179M3D218M 1332/1770 75.3% 1794/94230402 0.0% 45/1770 2.5% 114991699 75222856 +3055 chr4 + 190214555 148443235 148443234 148443271 37 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAT chr4 + 94230402 75300456 75300455 75300492 75300456 75300455 75300492 37 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT ..................:.............:.:.. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 73142779 NA +3035 chr4 + 190214555 148443237 148443236 148443270 34 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGA chr4 + 94230402 75300456 75300455 75300489 75300456 75300455 75300489 34 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ..............................:... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 73142781 NA +5075 chr4 + 190214555 148444452 148444451 148445025 574 GCCCGGGGCCGCC----CCTGCGCTCTCCGGACCCCCTCTCGCCGCTGTCAGCGCAAAGTGACTGTCGCTGCACTCACCTTTTCTAGGACATGGTG-GGGAGGCTGGGGCGGGGGAAGGGGAACGGCTAGACTCCCGCCGCCGCTGCTGCCGCCG---CCACCAGCAAG---TCCAATATTGGCT----------------------GATCGGCGG-----------TGAGGATGGAGAGGATGATAATC-------CCGGCAGTGGCAGTCGCCCTGCTGACG-GTGGGTAGAGCAATAGTGCTGTTACCCTACAAGAGGCGGCGAGGCAGCGGCG--CCAAATCGCGCAGAG---------GGGGAC---------------------GCGGGCACCCGCCCGCCCC--CAG---CGGCGGCGGCCGGGCCTCTGGCGGGCCCCTCTCCCGGGGCTGCGCGTCC-------GCTCGGCGTTGA----CAGCGGCGTCCCTGGGAGCCGGGAAGTCCGGCAGGAGGATCCCGCGCCCGCCGCTCCGCAGCGCCACTCTCCGCGCCCCCTCCCCGGGCCCTGGGTGGCCGGTGACAGCTCCGGCGGCCGAGCGCGTGTGTGAGGGGGCGGTCGCAGGGGGAGCCTGCGCCCCCCTCCCCGGGTCACGCCCTCAC chr4 + 94230402 1948775 1948774 1949430 1948775 1948774 1949430 656 GCCGCGGGCCGGCGTGGCTTGCGCTCTCCTTGCCGCGTCCCCTTGCAGGAGGCGGGTGGATCCCAGCGCCGCAGCGGGCCGCGGTGCGAGGCGGAGCGGGGAGCAGGAGGAGGGGAAGGAGGAAGGCAGCGCTCCCGCCGCCGCAGCCGCCGCCATGCCCAACATCAAGATCTTCAGCGGGAGCTCGCACCAGGACCTGTCGCAGAAGATCGCCGACCGCCTGGGCCTGGAGCTGGGCAAGGTGGTGACCAAGAAGTTCAGCAAC--CAGGAGACATGGTGAGGCGGGGGCGGGGCCGCACTACAGCTcc----cggcgggcggcgcggcgacgacggcccgggttccgcggggccgccgcgcgggggcTGCCGGGAGTTGTAGTgcgcggcgggtggcggcctggcacggcggggccgggggcggccgcgtccc--gcgggcctcgcacatgggccggcggctccgggccgggcccggcgcggggctcccgcgggcgccct--gaggcggtgggcccgg--ggctgtggccgcgccctctg----gcggctcggcgcggggctgcccctctgtgggccggggagggccgg-ggcggggccggAGGTGCGGTGCAGGTGTGCGGGGAGCGGCACACGCGCGGCCC-CGGGCCTCCCTGCGAGCTGCGGCCTCGC ...xx......x.----.:..........xx:..x.x..:.x::..x.xx:...x:x:.xxx.::x...:...x:x:x.:x:xx.:x..x::..x.-...::..x..:.x:........:.:.x...x:x:.............x..:......:---...x..x....---.:..:::xx:...----------------------.....x..:-----------..::.x...:x.:.:..:.:.:.-------:.:...::--...xx.x.x..x...x.-.x...::.:..x::.x.:.x.:.x.----.::x:.......x...::..:..--..:::.:x...:.:.---------....:.---------------------.....::x.x...:.x.x.--.:.---...x........x.:.:.--.......:.x.x.x:...x.x...xx...-------..:.....:x.:----.x....xxx....--...x...x::.:....--..xx.xxx........x.:.----..:..x.x:.x.xxx..xx......:x:.....xx..:x......-.:.:.xx....x..:xx:.:..:x.....x....:xx.x.:..x.x.x:...:-..xx..:.:.:x..:.:::..x....:. 13M4I79M1I58M3I11M3I13M22I9M11I23M7I8M2D17M1I25M4D23M2I15M9I6M21I19M2I3M3I18M2D29M7I12M4I13M2D16M2D20M4D45M1D53M1D28M 344/556 61.9% 656/94230402 0.0% 118/556 21.2% 146495677 43718878 +6148 chr4 + 190214555 148448718 148448717 148448917 200 GGCCAGATTTTGAGATGACAGAGCACCAAACAGCACATGCATCACAATTAGTATGCCATATTATTAGAAGCAAATCAGATTTCACCGTGCCTACACTGATGTTCTAAATTTAGAAATAATGTACAGTAGTTGAAAAAGGGGAGGAACTTAGAGCAGTATATTTTAATAAAAATAAAGACATTTTCAATTTCTCCTCTTTT chr4 + 94230402 33448545 33448544 33448730 33448545 33448544 33448730 186 GGCTGGGCTGCGAGATAACAGAGCGCTCGGGAGCTTA-ATTTCACAATTAGTTTGCCGTATTATTGGAAGCAAATCATATTTCACTGTGCCTACACCAGCGCGCTATTTTTAGCCAGAAT-----GTCGCTTAAAA---GGAGGAACCTAGCGAGATGTATTATCGCGCAGA-----ACGCGAACAATTCCCTCTCTCTT ...::.::.x:.....:.......:.:x::x...x:.-::x...........x....:.......:...........x.......:..........::::.:x...xx.....xx.x...-----..x.:.x....---........:...x.x::.:....x.x:::x.:.-----..::xxx.....:.::....:.. 37M1D82M5D11M3D33M5D23M 127/186 68.3% 186/94230402 0.0% 14/186 7.5% 115000173 75214382 +7123 chr4 + 190214555 148449117 148449116 148450163 1047 ACTTGATGAAACACTCATTTAGAATTTCTCATTAGGACTTCACAGGAGCAGTTAGCTTTTCAGTAGTTGGCACTA----TATTTTTAGCAACATTTTAACAGCTGTCAGTAGCAACTAAGACAACATCTTTGTCAACACTATTTTTTAAACTCTAGCAAAGATGATTGCAAAAAAATGCTTCAGGATTTAATCTTTAGCCATAAAAAAAGTTAGTGTGATATAAAATATTATTAATGCATTGCGGCAGGCAATAAGGTATCCACATAAAACGAGTCCACTTGAATTTTTATATTTTAATTTTCTCAACCCGGGCAACATAGCAAGACCCTGTCTCTAAAAAATAGTTTAAAAAATTAGTTGAGTGTGGTGACATGCACCTATAGTCCCAGCTACTTGGGCAGTTGAGGCAGGAGGATAGATTGAGCCTAGGAGGTTGAGGCTGCAGTAAGCCATAATCGCACCACCGTACTCCAGCCTGGGCAACACAGTAAGACCCTGTCTCAAAAACAAAACAAAACAAAAATTAATTTTCTGATGCCTAAGTATACATAAGAAAGATAATTTAAAAAGATAATTCTTAAAATGTGTGTTCAGTGTCAGAAACAGACACTATAATTCTAGGTTAAGAATAGCCA------TGTAGATAGCC------AAAGTGAAT---------AAAACCTTCTCCCTAACATTAGAGTTAATAGAGGGAGGTTATCACATGTCAGATATATGACACTGGAAGCAGCAAACAAAA-AATGTAAGAAGCTTCATGACAGATGTCATCTTTATTCCTAAAGATAGAGGTAAATTTGCTATGGGTAATGCATTACAAAACAAACTAAAACTAAATATCTGCAAGTGTCAA--ATTTCCCTTTCACCTATAGTCTTCCCAAATCGAGTGATTTTTGTTACATGAGAAGTAGGGGTAATGGTATAATATTAGAGAAGCCTACTGAATCCTCTTATTCATAGGTCATCTGCTCATTTCGAAGACCTAATCCAAC----------TTTTGAGTTTGTCCCAAGTAAGGCAGCTGAGTATTTCCTACTTCATCTAACTGGCACAGTGGAG chr4 + 94230402 33449184 33449183 33450018 33449184 33449183 33450018 835 ATTCAGTGCAAACCTCATTTG---TTTTCTGCCCGCAGTTCACAGGAGCACTCCGCTTTTTAGTGGTTGACACTGCAGCTATTTTTAGCGGCATTTTAACAGCTGTCACTAACAACCAAGATCTCATCTTGAGCG-------------------GGGAAGGGAGATT------ATCTGtttta----------tttaaaaaaaaaaaaaaatCAAACGACATA---------------ATTGC--CAGATTATAAAATG----------------CAATTTAGATCTTTAT-------------------------------------CTGTCAAGAGAAAA------------------------GGCTATCTGTTCCCATTATGCCAATCCCAT-------------AAAAAAAAAAAAAGGTCCTATGGTG----GGCTTGATAAAATAATGACTGGG-----GTCTACCAGACTGGGAAATACGG-------CTGT----------------------------TCTGTTGATACACGTACAAACGTATAAACAACGCTTGCAA---ATTCTGCTCGCAGTG---GCCCTGTGGCAGCTCCCGCTGCTGT-GTCGCAGCGTGGGAATGGGCAATGTTCTCCAGGTGGTCCGGGGAGCAGCGAACTCTCGCAGGAGAGCTCCCTTCCCCATCTC--------TGGATGGAGGTCAGCCTATGTCAGCCACGTAGCA--GGGAGCAGCGGGCACACTGGGGTAAGCCACTCTGCGGCAGATGTCATCCCTGCTCC-AAAGATAGTGGCAAATTTGCCCTGGATAATGCAATGCTGAACAAGATAA--------CTCTGCGAGCGCCAAGCATTACCTCCTCCCCTG-----CTCGCAAAGCCAGCGACTT---------------------------TGCACTGTGAAAGCAGCCTACTGTACTGCCTTGCTTAGAGGTCATGTGCCCTATTTTGAGAACTGAACCAAAGCGGATGAAGTTTTGAGCCGCGTCCAAGTGAGGCAGCTGGGCATTTCCCACTGCTCCCGGC---CCCAGTGAAG .:.:::..x..xx.......:---...::::::x.x.x............x.:x......:...:....:....:----..........::.................x..:....:....:xx......x:x.:-------------------:.x..:.:x....------.xx..:..:.----------....:xx.x.......:x.x:x::..:...---------------.....--...::x....::.:----------------.x.:..::..:.....-------------------------------------.....xxx.:....------------------------..:x.:x..:x..:..x:.x...:::x.x.-------------.::.::.x.:.xx.:x....x.:x.----....xx.xx..::x..:.::.x:-----..x:x....x.....x..:..:.-------....----------------------------.:.x:....:.x::x::.x..:..x:..x:.::x..xx..---..xx.x..::x.:..---.::.x...x...xxx.x.x::..:.-:.:x:..xx.::....:.x..------.x:..:.:.:.------:x..:...:---------.:.:.:::..:..:x.:x.:--------.:..x......:.x.x:.......x:.::.::..--..:......:::..x.x-::x.....xx:..::::.:...........::.::...-........x..:........:x...:.......x.:.x:.....:x...--------x.....:..:.:...--...x..:::..x...:-----:..x....x.x..:..:..---------------------------.::.x.:.x.:..x.........x.::x:...::.:.x.......x...:.xx..:x:...x..:.x....x----------.......::xxx:......:.........:.:......:...x.x:.:::.---.x.....:.. 21M3D51M4I56M19D13M6D10M10D30M15D5M2D14M16D16M37D14M24D30M13D25M4D23M5D23M7D4M28D40M3D15M3D25M1D21M6I11M6I9M9I20M8D34M2D17M1I38M1D49M8D15M2I16M5D19M27D72M10I51M3D10M 503/797 63.1% 835/94230402 0.0% 288/797 36.1% 114999933 75214622 +3334 chr4 + 190214555 148455722 148455721 148455870 149 TTCTGCTACATGAGGTCGTTCTCTTGTCTTTTCTTTTCTTTCTTTCTTTCCTTCCCTCCCTCCCTCCCTCTCTCTTTCTTTCTCTTTCTTTCATTCTTTCTTTCTTTTTCTCCTCTTTCTTTCTTTTTCTTTCTTTCTCTTCTCTCCTT chr4 + 94230402 71957344 71957343 71957485 71957344 71957343 71957485 142 TTCTGCCTCTCGAG-------TCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCT ......:x.x:...-------.....:..:..:x.:.:....::.:.:.x:x.::x....::...:.:...:xx..:x..x...:....xx:x..xx:xx..:...xx::.x:..:xxx...::....:.....:....:...:..::. 14M7D128M 83/142 58.5% 142/94230402 0.0% 7/142 4.9% 76498378 NA +3129 chr4 + 190214555 148455748 148455747 148455807 60 TCTTTTCTTTTCTTTCTTTCTTTCCTTCCCTCCCTCCCTCCCTCTCTCTTTCTTTCTCTT chr4 + 94230402 7218318 7218317 7218377 7218318 7218317 7218377 60 TTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT .:....:........:x.:......::..::...:......::.:.:.x....:.::.:. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 141237430 48977125 +4106 chr4 + 190214555 148455755 148455754 148455898 144 TTTTCTTTCT---TTCTTTCCTTCCCTCCCTCCCTCCCTCTCTCTTTCTTTCTCTTTCTTTCATTCTTTCTTTCTTTTTCTCCTCTTTCTTTCTTT--------TTCTTTCTTTCTCTTCTCTCCTTCCTTCCTTCCTCCCTCCCTCCATCCCTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCT-----CCTCCATTCTTC ......x...---.x..:.....:.:...:.:x::.x.:.x..:..x.x..x.::..::.x:x:.:.x.x..:x.....x..:............:--------::::::.x..:....x........:..:...:..-----.......:.:.. 10M3I83M8I34M5D12M 92/139 66.2% 150/94230402 0.0% 16/139 11.5% 98279489 91935066 +3506 chr4 + 190214555 148455790 148455789 148455887 98 TCTCTCTTTCTTTCTCTTTCT-----TTCATTCTTTCTTTCTTTTTCTCCTCTTTC-----------TTTCTTTTTCTTTCTTTCTCTTCTCTCCTTCCTTCCTTCCTCCCTCC chr4 + 94230402 67223947 67223946 67224060 67223947 67223946 67224060 114 TTTCTTTTTCTTTTTCCTTGTAGTTCTTCAGTCTTCATTTATGCTATTTCTCCTTCACACATGCTGTTTGCTTCTTGTTTCTTCATCTTCTCCCCTTCCTCCATTTATCTCACC .:...:.......:..:..x.-----....x....:x...x.x:.x:.:...:...-----------..x...:..x......:x.......:.......:.x..:x..:.x.. 21M5I30M11I47M 71/98 72.4% 114/94230402 0.0% 16/98 16.3% 81231843 NA +3642 chr4 + 190214555 148455843 148455842 148455902 60 TCTTTTTCTTTCTTTCTCTTCTCTCCTTCCTTCCTTCCTCCCTCCCTCCATCCCTCCTTC chr4 + 94230402 17044267 17044266 17044326 17044267 17044266 17044326 60 TTTTTGTGTTTCTTTTTCTTTTCTTCTTCCCCCCTCCCCCCCCCCCCCCATCTTTCTTTC .:...x.x.......:....:...:.....::...:..:...:...:.....::..:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 131411576 58802979 +3020 chr4 + 190214555 148485907 148485906 148485948 42 TGTGTGTGTGTGTGTGTGTGTGTGTATTTAGAGACAGGGTGT chr4 + 94230402 32478347 32478346 32478388 32478347 32478346 32478388 42 TGTATGTGCGTGTGTGTGTGTGTATTTTTAGGGACAGAGCGT ...:....:..............:.x.....:.....:.:.. 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 116007560 74206995 +3079 chr4 + 190214555 148535295 148535294 148535362 68 GTGTGTGGTGTTTTTTGTTGATGTTGTTGTTTTCTGTTTGTTTGTTTTTCTTTTAATAGGCCACTCTA chr4 + 94230402 22617877 22617876 22617944 22617877 22617876 22617944 68 GTGTGCTCTGTTTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTTTTTAAAACCTTGCTCTA .....:xx............x.:......x...:.x.::x...x.....:......x.xx:::..... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 125917418 64297137 +3079 chr4 + 190214555 148546870 148546869 148546943 74 TGAAAAAAAACAAAAGACAAAAAAGAAAAAAAAAAGAAATTTGTCTCAATACCATTGTGGGGATTCATTTTCTT chr4 + 94230402 57703599 57703598 57703672 57703599 57703598 57703672 74 TGAAGAAATACATAAGACCAAAAAAAAAAAAAAAAAAAGCATGTCTCATAACCTCTAAAGGGGCAGATGTACTT ....:...x...x.....x.....:..........:..::x.......xx...x:.:x:...::xx..x.x... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 90843271 NA +3042 chr4 + 190214555 148556345 148556344 148556410 66 TTCCTGCCTGACGTGTGTGTGTGTGTACATGCATGCATGTGTGTGCGTG-----TACATGTGTGTTTGAAG chr4 + 94230402 9864493 9864492 9864562 9864493 9864492 9864562 70 TCCTTGCTTAACATATGTGTATGTATACATATATGCATGTGTGTGGATGGGAATTATATACAT-TTTGAAG .:.:...:.:..:.:.....:...:.....::.............x:..-----..:..:::.-....... 49M5I9M1D7M 49/65 75.4% 70/94230402 0.0% 6/65 9.2% 138691852 51522703 +4197 chr4 + 190214555 148557944 148557943 148558045 102 TCTGTCTACAGCC--ATACCACCCTGAACATGCCCGATCTCATCTGATCTTGGAAGCTAAGCAGGGTTGGGCCTGGTTAGTGCTTGGATGGGAGACAGTTGAAG chr4 + 94230402 2289804 2289803 2289905 2289804 2289803 2289905 102 TCCACCTGCAGCCCCACACCACCTCCGAGCTGT--GACCTTCTCAGATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGAAGCATTCAAGG ..:::..:.....--.:......::x:.xx..:--..:..:x..x.....::x.......x....:.......x...:...............::..x.::.:. 13M2I18M2D69M 71/100 71.0% 102/94230402 0.0% 4/100 4.0% 146268140 43946415 +3553 chr4 + 190214555 148565670 148565669 148565742 73 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:.::........x.xx:x...x..........::.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 72532465 NA +3143 chr4 + 190214555 148565796 148565795 148565842 47 TCCCCCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATAAGAAA chr4 + 94230402 15676744 15676743 15676790 15676744 15676743 15676790 47 TCCCCCACGAAAATACAGGGAAAAAAAAAAAAAAAAAGCATATGAAA ........x....x.x.:::......................x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 132889052 57325503 +3085 chr4 + 190214555 148608595 148608594 148608675 81 GCCTTTATTTATTTTTCATTAGTATTGCTTTTTTGGTTGTGTCCGAGATGAAGATGTATTATAAGGAGAAAATTATAAAAA chr4 + 94230402 59034104 59034103 59034184 59034104 59034103 59034184 81 GCTTTTGTATTGTTTTCTTTAGTGCTGCCTTTTTTGTGGTCTACAGAAAGGAAATATACTATAAAGGAAAAAGTAAGGAAA ..:...:.x.xx.....x.....::...:.....x..x..x.x.:::.x.:.:..:..:.....:.::....x..x::... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 89574491 NA +3632 chr4 + 190214555 148614979 148614978 148615050 72 GCACCTGTAGTCTCAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......::.......x..::........x.xx.x...x...........:.:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 72581773 NA +3493 chr4 + 190214555 148622666 148622665 148622748 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCATTTGAACCTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::........x.xx.x...x..:.......::.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 72589469 NA +3888 chr4 + 190214555 148679438 148679437 148679541 104 TGAAACTGGCTTCTTGTTCTGCCACTCAAGAACTAG--ACCTTGGGTTAGTTACCTAACTATTTTAGAGCCTCAATTTCTCCATCTATAATATGGGGATAATAATA chr4 + 94230402 13242439 13242438 13242544 13242439 13242438 13242544 106 TGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTA ...::::x.:.:.:x.:.........x.xxx..:x.--........:x...:..x..:.:x:.:..:x......:....:......:...x..:......x..x.. 36M2I68M 70/104 67.3% 106/94230402 0.0% 2/104 1.9% 135436999 54777556 +8134 chr4 + 190214555 148686336 148686335 148686670 335 TTTTGCCAATTAAC-TTATTAGT-------GCAAATTTGTATGTCCTGGTTCTTCTAAGTCTTTGCCAGTTACTTTGGAACACTGAACACTTAACTGTGCTTGCTCTGGGGTACTAGCAATGAAACAGTAATTAACTGAGACAGTTGTATCTTTTCCTTAAAAGCTAGAGAATGGGATTACTCTCC-------AATAAACAGGCTGAAAGCA--------AAGTAATGATAACTCTTTTGATAA-----------CTCATAGTTAACAT----AATTTTTTACATTAGTTAAACACTACAGA-AATTAAAACTAATGAAATTATGGTTTGTCAGATGTAATA-AAATGCCAACACATCAAATCTGGCTTGGCTCA chr4 + 94230402 33503921 33503920 33504285 33503921 33503920 33504285 365 TTTTTCCTATTAACGTTATTAGTTGGTAGCACCAATATCTACAGGCTTGTATCC---AGCCATTACCAATTATTTTGGACCGTGGAAAAC----ATTTGCTTGCTCTGGGGTACCAGCAAGGAAACAGTAATT-ACTGAGATAGTTGCTACTTCCCCTTGAAAGATAAAGATTAGGATTATGCTCTTTTGATAAATTAATAAGCCTGAATCAATTAATATATTTAATAGGAACCC--TTGATAACAGGAAGACACCTCAAAGCTTTTGCTGTGAACTTTTCCCATTACTTCAAAACTGCAGACAATGAAGATAAATGAAATTGCACTTCATCAGTTGTAGCAGAAAGGGTGGAGGATGAAATCTGCCTAGAATCA ....x..x......-........-------:.x...x.x..::xx..x..x:::---..:.x..:...:...:......x.::x...x..----x.x.................:.....x............-.......:.....:xx...::....:....x..:...x.:......:x...:-------...x..:.:..:x:..x..--------.xx....::x...:.--.......-----------....x..:.xx:::----..:....:x.....x..x..x...:....-...x..:.:x.........:::x..::....x....::.-...x.x:::x:x..x.......x..x.:x... 14M1I8M7I24M3D33M4D39M1D52M7I19M8I15M2D7M11I14M4I29M1I39M1I32M 229/325 70.5% 365/94230402 0.0% 50/325 15.4% 115182415 75032140 +3442 chr4 + 190214555 148687096 148687095 148687155 60 AGTGTGTGTGTGTGTGTGTGTGTGTATACTGTGTCTATGTGTGTGTGTGTATATATATAG chr4 + 94230402 51658574 51658573 51658633 51658574 51658573 51658633 60 AGTGAGCAAGTGTGTGTGTGTGTGTATACCATGTATACATGTGTGTATGTCTGCACACAG ....x.::x....................::...x..::.......:...x.::.:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 97028522 93186033 +7991 chr4 + 190214555 148692867 148692866 148693139 273 GTGAATTCTT-TTTCGACGACCTTTTCTTC--------------AGTGAAGATTGTTTCAAGTAAAGCTGTCT--GATATAGAGACATGGTTGCTAGGGAGACAGAGTCATAATGGCTGATGTTACCAGGGAAG-GTAAAGCGGTGAGTCCCTGATTATAGAAGAGAACAATTTTTCATTCTCCTTGAAAGCGAGTCTTCTTT--ATACACAGATGACAAGTTCACTAACTCAGTAGAAATAAGACTTCAGAAAGAAATATTAAA------TTTTAATGTTTCCTCAGAGTGATGTAAA chr4 + 94230402 33507181 33507180 33507478 33507181 33507180 33507478 298 GTGAATTTATATTGTTACGGCCTCCTCTTCCCCATGCTATCAGAAATACAAATATCTATAAGTGAAGTTGGCTTGAGTGAAAAGGAATGGTTGCTAGGTAGCCACTGTCATGATAG-TGAAGGTACCAGTAACTCACGGAGAAATGAGTCCCTCATAATTGCAAAGATCCGTTTTTCACTCTCTTTGAAAATGAGCCTTTTTTTCCTATACAGATGACAAGATCACCAGCTCAGCAGGAAAAAGCCTGCAGAAAAACACAAGCAAGAGGCTTTATTGTGTCTCCTCACAGAGAAATAAA .......:x.-..x:x...:...::.....--------------.:.:x.:..xx:.x:....:...:..x..--::.:x.:..:x............x..x..xx.....:..:.-...x.x......x:.xx-::::..x::.........x..x..x.x.:...x.x:.......:....:......::...:...:...--x..:............x....:.:.....:..:..x...x..x......:.x.:.xxx..------..x.x:...:......x..x..x:.... 10M1I19M14I29M2I41M1D17M1I68M2I60M6I28M 188/272 69.1% 298/94230402 0.0% 27/272 9.9% 115185686 75028869 +3063 chr4 + 190214555 148730014 148730013 148730074 61 TTTTTTAATTAGCATTTTCCTTTATTAAAAATACAAGAAGAGAGAAAAGAAAATAGTTTTG chr4 + 94230402 63793224 63793223 63793284 63793224 63793223 63793284 61 TTTTTTAAGTAACATTCTCATTTTAGAAGAATGTGGTAGGAAAGAAAAGAACATAGTTTTG ........x..:....:..x...xxx..:...::::x.:..:.........x......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 84936790 NA +3590 chr4 + 190214555 148741546 148741545 148741630 85 CATGGTGGTAAGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGGGTATCACTTGAGCCTAGGAGGGCGAGGCTGCAGAA chr4 + 94230402 76033197 76033196 76033279 76033197 76033196 76033279 83 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA ..::.....--....x......:.:.......::::........x.xx.x.x.x.......:..:..:..xx:x:.....:.... 9M2D74M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 72708349 NA +3155 chr4 + 190214555 148744144 148744143 148744227 84 AACAACTTAAGTTTGTTCTTTTCTTTCTTTGTTTTTTTCTTTCACTCGTTCTTTTTTTTTTTTTTTTTCTTAGTGGAAAGGTTA chr4 + 94230402 37898145 37898144 37898228 37898145 37898144 37898228 84 AATTACTTCTGTCTGCTTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTA ..:x....xx..:..:.:..:.:...........:.x.......:.::.::::.x....xx..:.x.....:xx..:.xx.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 110845999 79368556 +3066 chr4 + 190214555 148750283 148750282 148750356 74 GTGCGCTTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........x.::........x.xx.x...xx:.x.......:.:..x:xx:.x:..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 72717079 NA +3465 chr4 + 190214555 148751631 148751630 148751722 92 TAAATGTATCACAATTCTCATGAAGCGTGGGGCTGGTTCTTGGCAAAACTGTAGCTGTTTTTCTTTGGTCT-TTCCAGCCTTCCTTTCTTTCT chr4 + 94230402 45257320 45257319 45257412 45257320 45257319 45257412 93 TAAAGTTTTCAGAGTACACATGAAAAGTGAGGATGGATCTTGGCAGCACTGTAGGTTCTTTTTCCAGATCTGTTTTGGCCTCTCTTTTTTTTT ....xx.x...x.:.x.x......:x...:..x...x........:x.......x.x:....:::x.:...-..:::....::....:...:. 71M1I21M 63/92 68.5% 93/94230402 0.0% 1/92 1.1% 103494311 86720244 +4632 chr4 + 190214555 148755059 148755058 148755202 144 CAAACCAAACTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTT---------CTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTT-----------------TCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTT chr4 + 94230402 50176257 50176256 50176426 50176257 50176256 50176426 170 CAAGATGGATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT ...:x:::.:.....x...:x..x:.:::.......:....---------.....x:x.:x........x......x.x...x..:..x::.............-----------------.:..::.x...::..::.........::.:.x......x:x:x.:.... 41M9I54M17I49M 98/144 68.1% 170/94230402 0.0% 26/144 18.1% 98578802 91635753 +3473 chr4 + 190214555 148755068 148755067 148755148 81 CTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTT---------CTTTTCTTTCTT----TCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697146 63697145 63697239 63697146 63697145 63697239 94 CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....:....:.:x..:....x....xx.....---------....x....:.:----.......:.:.::.............:....:.x.:. 32M9I12M4I37M 62/81 76.5% 94/94230402 0.0% 13/81 16.0% 85057922 NA +3268 chr4 + 190214555 148755072 148755071 148755182 111 CTTTCTTTCTTTTTCTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTT chr4 + 94230402 36195258 36195257 36195367 36195258 36195257 36195367 110 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCAT-TTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTT .....:...x.x..:.::x....:.xx.xx:x.-..........x:........:...:....x...x...:xxx:..x..:x:..x...:.:..x::.::.....:x... 33M1D77M 71/110 64.5% 110/94230402 0.0% 1/110 0.9% 112559814 77654741 +4349 chr4 + 190214555 148755087 148755086 148755357 271 TCTTTCTTTCTTTCTTTTCTTTCTTTC-----TTTCTTTTCTTTCTTTTCTTTCTTTCTTT--------CTTTCTTTCTTTCTTTCTTTCTT---TTTTCTTTC--------------TTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTC--------TTTCTTTCTTTCTTTC------TTTCTTTCTTTCTTCT----TTCCTTCTCTTTCTTTCTTTCCC chr4 + 94230402 66682149 66682148 66682470 66682149 66682148 66682470 322 TCTTCCTCTGTCTTTTCTCTTTCCTTCAAATGCTGCATTTCTTCCTCGTCTTTCTTTTGTTGGCTGGGGCCCTCAACCTCTTTCTCTTGCTTCAGTTTTATTTCAGCTTCTGGAAGCTCTTCCTCTTCTAGCTCTTGTCTCTGTTTTTCTTCCTTATTTTGTTCCACTAGTTCTTTTTGTTCCTCCAGCTGATTTCTTTCCTCTTCCTCCTGACACCATTTCTCAGTCTCGTGTTGCCTCAGTTCTTCCAGCTCTAGCCTctcctgctcctccagcacatttctctgttcctcctccagctccttgtgcttctgctcttccc ....:..:.x.:.:..:......:...-----:.x.x......:..:x.........:x..--------.::..xx:..:.:.:....x...---....x....--------------:...:.:....xx..:::x..::.x:...:.:.:.:.x:.:.x:...x..xx.:.:...:x:..:::.xx::xx.........::...:.:..xx.x::x.....:xx.:..---..x.:.:xx.....:.--------::...:::x:..:.:.------.....:.x..:..:..----:.....x.x:....x:::..... 27M5I29M8I23M3I9M14I112M3I16M8I16M6I16M4I23M 166/271 61.3% 322/94230402 0.0% 51/271 18.8% 82072938 NA +3390 chr4 + 190214555 148755108 148755107 148755199 92 TCTTTCTTTCTTTTC--TTTCTTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTC chr4 + 94230402 51335296 51335295 51335392 51335296 51335295 51335392 97 TCCTTATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC ..:..x.x.......--.:x...xx.x.xx....:.xx.....:x.---.:..x....:.....x..:.......:......:.....:.:..:... 15M2I29M3I48M 67/92 72.8% 97/94230402 0.0% 5/92 5.4% 97419812 92794743 +3255 chr4 + 190214555 148755130 148755129 148755206 77 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCC chr4 + 94230402 66493589 66493588 66493665 66493589 66493588 66493665 77 TTTTGCTATTTTTCGTTTTTAATTTTTCGGTTTTTGTATTGTATTTTTTTTTTTCTTCCATCCTCCCTTCCCTTCCC .:..x..x.:....x..:..xx...:.:xx...:.x.x..x.x.:...:........:.x....:......:..... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 82261541 NA +3270 chr4 + 190214555 148755131 148755130 148755212 82 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTC chr4 + 94230402 66493586 66493585 66493667 66493586 66493585 66493667 82 CTATTTTGCTATTTTTCGTTTTTAATTTTTCGGTTTTTGTATTGTATTTTTTTTTTTCTTCCATCCTCCCTTCCCTTCCCCC ..x.:..x..x.:....x..:..xx...:.:xx.....x:x..x.x.:.....:........x....:....:..:.:..:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 82261545 NA +3159 chr4 + 190214555 148755132 148755131 148755195 64 TTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTC chr4 + 94230402 51335326 51335325 51335392 51335326 51335325 51335392 67 TTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC ....:.xx.....:x.---.:..x....:.....x..........:...:.::.......:..:... 16M3I48M 49/64 76.6% 67/94230402 0.0% 3/64 4.7% 97419806 92794749 +3040 chr4 + 190214555 148755145 148755144 148755255 111 TTCTTTCTT--TCTTTCTT-TCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTT chr4 + 94230402 76214243 76214242 76214356 76214243 76214242 76214356 114 TTTTTTCTTCATCTTTCTTATGTTTTTGCTTCCTTTTCTCTTGTATCTCTCAGATCTTCTGTTTTTTCTGCCCCTGCACTACTACTGCTTTTCCCCTTCACATTCTCATCTTTT ..:......--........-.x.....x...:....::.:..x.x...::.xxx::.:..x.:::...:x..:..x.x.:x..x..x.:....:.::..x.x:....x.::... 9M2I8M1I94M 71/111 64.0% 114/94230402 0.0% 3/111 2.7% 72540902 NA +11978 chr4 + 190214555 148755150 148755149 148755355 206 TCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTC------------------------CTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTC--TCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTTCTTTCTTTC chr4 + 94230402 27163708 27163707 27163938 27163708 27163707 27163938 231 TCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCctttctttctttctttctttcttttctttctttcttttctttctttctttctttctttctttctttctttctttctttctctctctctctctctctctttctctctttctctctttctctctctctttctctctttctctctttctttctttctttctttctt-tctttctttctttc ..:..:..x:...:.:......x.:...xx.....:..............------------------------....:.:...:.:..:....::.:.:..::.....--...:...:...:..........:..:...:...:...:.......:.......:.......:...:.......:.......:................::..:...-.............. 50M24I35M2I106M1D14M 166/205 81.0% 231/94230402 0.0% 27/205 13.2% 121591442 68623113 +3219 chr4 + 190214555 148755157 148755156 148755299 143 TTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCT-----CTCTCTCTTTCTTTC-----CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 52146242 52146241 52146394 52146242 52146241 52146394 153 TTTGTGCTTCTCTCTTCCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTCTTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTCTTCTCCACTTCTACTCCCTTTTGCT ..:x.x...:.:....:.:.:......:...:....xx.x.::xx...:.x.:x.:..::.x..xx:....x.x:.::..:..:.-----.:x.x.x.x.....:-----.:...::........:....::::x...::x:..::.:..x.. 85M5I15M5I43M 85/143 59.4% 153/94230402 0.0% 10/143 7.0% 96608915 93605640 +3432 chr4 + 190214555 148755234 148755233 148755350 117 CTCTCTCTCTCTCTCTTTC-----TTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC-CCCTCTTTTCTTTCTTCCTTTTTATTT ..:.x.::.....::..:.-----....:....:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......:..-::..:.:.......:.:..:...x... 19M5I36M2I34M1D27M 77/116 66.4% 123/94230402 0.0% 8/116 6.9% 85058117 NA +3186 chr4 + 190214555 148755240 148755239 148755323 84 CTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.:...:..::.x.....x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 91383214 NA +3427 chr4 + 190214555 148755250 148755249 148755354 105 TTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTCTTCTTTCCTTCTCTTTCTTTCTTT chr4 + 94230402 63697122 63697121 63697233 63697122 63697121 63697233 112 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCT---CTTTTCTTTCTTCCTTT ...:.::......:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..::..---...:........:.... 60M5I11M5I14M3D17M 72/102 70.6% 112/94230402 0.0% 13/102 12.7% 85058128 NA +3109 chr4 + 190214555 148755287 148755286 148755375 89 TTTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTTCTTTCTTTCCCCTCTTTCA-ACAGACATTT chr4 + 94230402 49829835 49829834 49829920 49829835 49829834 49829920 86 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTC-----TCCCCCCCCCTCCCTCACACACACACTT ..:.x..:.:.x.xx...x:...:x::.-...........:.................-----.:.:::......::...-...x...:.. 28M1I29M5D17M1I10M 62/84 73.8% 86/94230402 0.0% 7/84 8.3% 98925452 91289103 +3004 chr4 + 190214555 148783511 148783510 148783574 64 GGAGCCAAATTCCTAGTACATCTTCCATCTCTTAATACACACACACACACACACACACACACAC chr4 + 94230402 64922020 64922019 64922083 64922020 64922019 64922083 64 GGAACTAAATTCTCAGAACTCCACCTCTCCCTTTATGCACACACACATGCACTCCCCCACACAC ...:.:......::..x..x:.x:.:x..:...x..:..........::...x.x.x....... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 83861491 NA +4476 chr4 + 190214555 148785209 148785208 148785344 136 TTCATCCTTCTTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTT---TTTTTCTTTCT-TTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTT----CCTTCCTTCC---TTCCTTCCTTCCTTTCTTTCTTTCTCTTTCTTTCTT chr4 + 94230402 50176268 50176267 50176414 50176268 50176267 50176414 147 TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ...xx:..:x:..:::.:.......:....x.:.x::.x:.:..---..x........-......x.x..:x...:.x.....:...:.....:----..:x...:..---..:...x::.....::..........:.:.x..... 44M3I11M1I35M4I10M3I36M 95/136 69.9% 147/94230402 0.0% 11/136 8.1% 98608941 91605614 +3905 chr4 + 190214555 148785219 148785218 148785455 237 TTGTCTTTCTTTCTTTCTTTT------TTCTTTCTTTCTTTTTTTCTTTCTT-----TCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTCTTTCTCCTTCCTT-----CCTTCCTTCCTCTCTCTCTCCCAT---TCTTTCTTTCTTTTCTTTCTG chr4 + 94230402 19215305 19215304 19215567 19215305 19215304 19215567 263 TTCTCTGCCTTCCTCTCTGTTGGTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCC-CCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCTG ..x...x:...:..:...x..------..:..x:...x....:..x..xx..-----.x..:.x.....x.::...xx:x:x.:..:.:.xx.x:..x:xx::..::...:..:::.:-:....:.:...:...xx....-----......x..::...x......xxx....---....::xx:.::..:..x:......:x..x.....-----.:.::...xx::.:.:...x..x.---.:.....x..:.:.x.:.... 21M6I25M5I61M1D21M5I28M3I35M5I24M3I21M 147/236 62.3% 263/94230402 0.0% 28/236 11.9% 129569914 60644641 +3256 chr4 + 190214555 148785234 148785233 148785330 97 TCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTT-----TCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTT chr4 + 94230402 38895910 38895909 38896011 38895910 38895909 38896011 102 TCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTT ...:.....::..x.x.:::x...:...:..:......x.x....:...:.......x:x.x..-----...:....::::.xx..x..:.:.x..:x.... 64M5I33M 64/97 66.0% 102/94230402 0.0% 5/97 5.2% 109889324 80325231 +3197 chr4 + 190214555 148785260 148785259 148785312 53 TTCTTTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCC chr4 + 94230402 38772185 38772184 38772237 38772185 38772184 38772237 53 TTCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCC ......:.......x.....:...:.:..:....::.....:x:.:...:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 110013075 80201480 +3373 chr4 + 190214555 148785423 148785422 148785485 63 TCTCTCTCCCATTCTTTCTTTCTTTTCTTTCTGTTTTAGTTTCTTTCTTTTTCTTTTCTTTCT chr4 + 94230402 90927825 90927824 90927881 90927825 90927824 90927881 57 TTCCTCCCCCATTCTTTTTTTTTTTTCTTTC------AATTTTTCTCTTTTTCTTCTCCTCCT .::...:..........:...:.........------.:...:.:..........:..:.:.. 31M6D26M 46/57 80.7% 57/94230402 0.0% 6/57 10.5% 57857598 NA +3516 chr4 + 190214555 148785431 148785430 148785487 57 CCATTCTTTCTTTCTTTTCTTTCTGTTTTAGTTTCTTTCTTTTTCTTTTCTTTCTTT chr4 + 94230402 94003853 94003852 94003909 94003853 94003852 94003909 57 CCATCCCTTCTCTTTTTCCTCTCTGTTTTAATTACTGTTTTTTTTTTTTCTCTCTCT ....:.:....:.:...:..:.........:..x..x.:.....:......:...:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 54781578 NA +3136 chr4 + 190214555 148797005 148797004 148797057 53 CACACTCTCAGTTATCTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248036 75248035 75248088 75248036 75248035 75248088 53 CACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ....xxx.x.:.:x.:::..................x................ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 73548969 NA +3598 chr4 + 190214555 148797020 148797019 148797058 39 CTTTCTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ...:................................... 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% 73548971 NA +3002 chr4 + 190214555 148797023 148797022 148797057 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 136195718 54018837 +3225 chr4 + 190214555 148797024 148797023 148797058 35 CTCTCTCTCTCTCTCTCTCACACACACACACACAC chr4 + 94230402 12601304 12601303 12601338 12601304 12601303 12601338 35 CTCTCTCTCTCTCTCTCTCACACACGCACACACAC .........................:......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 136195720 54018835 +3203 chr4 + 190214555 148798272 148798271 148798326 55 TATATATGTTTATATATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325502 27325501 27325556 27325502 27325501 27325556 55 TGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .:....::::.:x.:x.....:...........:.........::...:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 121472770 68741785 +3416 chr4 + 190214555 148807493 148807492 148807638 146 GAGAACAAAAAAGGAAGAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGA----------AAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGG chr4 + 94230402 90064985 90064984 90065140 90064985 90064984 90065140 156 GACAGGAGACAAGGAAAAAGGGGAAGAAGAGAGCAAAAAAGTTAAGGAAACAAATAAAGTTTAAAAAGGCAGTAAAGAAAACATGTGGGTTGAGATAAAAAATATTTAATAAGTGAAGAAGTGGAAGAAAAGAAGGAAAATGAACCAAACCAAAGG ..x.:x.:.x......:.....:.:........x:...:..xx...:.::x.::x.::.xxx.:.:..:x..x...:..:.----------:...x.:....x.xxx..x:.:x...::.:x.:......::..:::...x...xx...xx..... 81M10I65M 88/146 60.3% 156/94230402 0.0% 10/146 6.8% 58742508 NA +3861 chr4 + 190214555 148807498 148807497 148807705 208 CAAAAAAGGAAGAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAA----------AGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGAAGGGGAAGGGGAAGGAGGGTGGAAGGAAGGAATGAAGGAAGGAAGGAAG chr4 + 94230402 59372543 59372542 59372755 59372543 59372542 59372755 213 CGAAACCGGGAGAAAGTAATGC---GAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAA--AATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG .:...xx..:....:.x..x.x---...:.:...x:.x.:.......::.x:xx..:..x:.x:..x..x.....:..:..x:.x..x..----------:.x:..::..:......:...x..x:...::....:x.:x..x..:.::.x...x..x:.......--..x::x..x:.....:.:x:xx:....:x::.x.x..x:.::.:.::... 22M3D65M10I66M2D50M 120/203 59.1% 213/94230402 0.0% 15/203 7.4% 89434955 NA +3648 chr4 + 190214555 148807508 148807507 148807644 137 AGAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAA chr4 + 94230402 7358245 7358244 7358378 7358245 7358244 7358378 134 AAAAGGAGACCATGGCTGAGATGGGGAGAAAAGAGAAGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATG---GAGAGGACCTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAAATGAA .:....::.xx.x.:xx....x:.:..:..:.::.....:.xxx.........x...:.:.:....:...:.:...x.---..:..:.xxx.:...:..xx::..xx.:..x:x..:x....:.:...:.:..x... 78M3D56M 82/134 61.2% 134/94230402 0.0% 3/134 2.2% 141449263 48765292 +3302 chr4 + 190214555 148807558 148807557 148807631 74 GAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAA---GAAAGAAAGAAAAAGAAAGGAAGAAAA chr4 + 94230402 38078777 38078776 38078853 38078777 38078776 38078853 77 GAGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ...x........::.............::::.......x.x...::.---.xx.x.:......x.:..::..:.... 47M3I27M 54/74 73.0% 77/94230402 0.0% 3/74 4.1% 110728781 79485774 +3147 chr4 + 190214555 148807567 148807566 148807671 105 AAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGAAGGGGAAGGGGAAGG chr4 + 94230402 15855375 15855374 15855479 15855375 15855374 15855479 105 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGG ..:.:x.....:...:...x:::x.....:..xxx::.x..:xx...::.....xxx::...:.:...:.:...:..:.:......x:.:.::.:.x.:::.... 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% 132952192 57262363 +3243 chr4 + 190214555 148807578 148807577 148807648 71 AAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAA chr4 + 94230402 34175637 34175636 34175707 34175637 34175636 34175707 71 AACAAATAAAAGACAGAAAGAAAACACTAAAAATAGGAGAAGATAAGAAGTAGAAGAAAAGAAGTAAAGAA ..x...x:.....x....:....:x.xx...:.x..:.:....x.:....x.:......:....x..:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 114631941 75582614 +3207 chr4 + 190214555 148807584 148807583 148807670 87 AGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGA-AGGGGAAGGGGAAG chr4 + 94230402 75241507 75241506 75241594 75241507 75241506 75241594 88 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAG ...x..:..:x.....xx.x...x............:...:........:.x....xx::..:..:x:..:x.-.:....x::x.... 73M1I14M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 73566077 NA +3266 chr4 + 190214555 148820759 148820758 148820831 73 AAGGAAAGAAGAAAGGAAAGAGGGAAAGAAGAAAGGAAGGAAGGAGGGAAGGAAGGAA-----GGAAAAAAATTCATA chr4 + 94230402 73744717 73744716 73744794 73744717 73744716 73744794 78 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAGTCATA ..:.:..:........:..::........::.....::::....:...::.x::..x.-----.....:x..x..... 58M5I15M 51/73 69.9% 78/94230402 0.0% 5/73 6.8% 75076042 NA +3176 chr4 + 190214555 148825504 148825503 148825571 68 ACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTACT chr4 + 94230402 18047933 18047932 18048000 18047933 18047932 18048000 68 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCT .....:...xx..:.x...:............x........xx:..:.x:.x.......:x..x.:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 130777571 59436984 +3035 chr4 + 190214555 148826608 148826607 148826656 49 TATCATTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGC chr4 + 94230402 65235512 65235511 65235560 65235512 65235511 65235560 49 TGTCATTCTCATTTCTTTTCCTGATTTTTTTTTTCTTTTTTGAAATGGC .:.....:.:x........:..xx..........:........:.:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 83591096 NA +11042 chr4 + 190214555 148882248 148882247 148882590 343 TTCTTAATGCTAATGT------GTTTTTGAAAATTT----TAAAATGCATTTTGTTGTTAGTTACTCCCTGAGTCCAGAGTGTCTG---CAGAGCTACAATGCAATGATATCTAAGGGGT--GGGTTTTTGTTTCCCCTGCCGTGGTCTTGTAGCCGCAGTGTCATGCTAATGAATCTCCTGCAGGATCACAAAGAACACAGAATGCCAGCAGTGGAAGGGCCTAAATGTCTTTTACAACTATTTGTTATCTTCAAGGTCAGCAAGGATGCACCTGGTAAACACAGATGCTGTAACCTAAATCCCGCCTGCTCACAAAGACTTGTCTCTGATTAGGCTATT-TGAATAAAACATTACTT chr4 + 94230402 33567649 33567648 33568001 33567649 33567648 33568001 353 TCCTTAATGCTAATGTAGGAGGGTTTTTTTGTATTTAATTTAACATACATTTTGTTATCGCTTG-GCTCAGTGCCTTAGGAGTCTGAGCCAAAGCTGTTACACTGTAATATCCATGAGGTTCAGTTTTCTCTTTCACCTGCAGTACTGTACT--CTTCAGTGTAATGCTAATGTGACTCCTGCAGTATAACAAAGAACCCATAATGACAGCAGCAGAGGGGCCTGAATGTCATTTACACCTATTTGCTATATTCAAGGTCAGCAAGAATGCACCTGCAAAACACACGCACTGCACCCAGA---CTGGCTACAGGAAAATGATCCACTGAGATGAGATTATTATGAATAACAGACTTTTT .:..............------......xx:x....----...x..:.........:.::x..:-x.:.x.x.:.:x::.x.....---..:....::x.::.x:.:.....:.x.:...--:.x...:.x....x.....x..:x.x.xx.--.:x......x.........x:x.........x..x.........x..x....x......::..:......:......x......x.......:...x...............:.........xx.......x:::...:.x..x:.---.:.x..:.xx:x...x:x.:xx..xx...x..::....-.......x.x.:.x:.. 16M6I14M4I24M1D21M3I31M2I30M2D146M3D38M1I17M 239/337 70.9% 353/94230402 0.0% 22/337 6.5% 115314599 74899956 +20518 chr4 + 190214555 148906363 148906362 148906929 567 AAAACTCCATGTCAAATAAAAACAGCCTGAAAAATGGTGCCTTCTTGCT-GAT---------GGCATTAGTGATATTATGGAACACAATTCCTATGTT-TTAAAAAACAATGGAACTTGTTATGGAATTG-AGTTTCCCAGAGAGTGCCACATGACCGCAGGCTATTAATTATACAGTTTTATTGTTATCTTTTGTTCAGAACAATAGTGCTCTGGAGGTCCTGTGGAACTTTTCTCCCATGCGATCTTGTCGGGTTTTGATTAAGCATCATTATATACAGTTCATTAACAATGTATCTTAAAATGAGTTTTTGATTGAACATTTTTATTGGTCATTTACTGTAATTGATGGATTCTGCTGCAATTTCACATAGAAAATTTTCCAGGATAGTAAC--AGTATTTTTCATTATGTATCATTATGCTTTCCCCGCCCCCCAAAAGAATACAAGTTTCCTCAAAAAAAAAATTAAACTA---AAATATTAGATATTGATCCATTGCA-----AAGGCAGTTGCTCTTTCCATAGTTCATTCAGAAAGGACACAAACTAGTAATAATGAATAGGAATGAGAACA-----ATTTGTAAA chr4 + 94230402 33575339 33575338 33575914 33575339 33575338 33575914 576 AAAATTCCAGAGGAAGGAGAATCTGCCTGACAAATGATGTCTTAATGTTTGATCAAATTCAAGGCATAAATGGTATCATGCAGCATAATTTCTGCTTTCTTGAAAAACAGTGCAGTTCATTTAGAAATTGGAATTCCCTGGAGATTGCCAGGGGAGTGCAGATTATTAATTACAGTGTTCTCTCATTATCTTTCGTTCAGAACAATAGTGCTCCGGAGGTCCTGTGGAATCCTTCTCCCCTGCAAG-GTGTCGGGTTTTGATTAAGCATCATTTCATACAGTTCATTAACAATGTATCTTAAAATGAGCTTTTGATTGAACATTTTTATTGGGCATTTAATATAATTTATGGTTTCTGTTGAAATTTTACATACAACATTTGCCAAGTTAGTTATTATATATTTTTCATTAAACAATG----GCATTTTAAGTTTTCTGAAAGGTTCTA---TTTTTTAAGAAGAGGAACAGATTATATAAAAATTGATTATGAATGCAGTATATCATGAAAATAGCCCTCCTGGCTATATTTTATTC----------CAACGGAGCTACAGTACATAGGTGTATGAGCAGGTCCATTTGCAAA ....:....x:xx..:x.:..x.x......x.....:..:...xx..:.-...---------.....x.:..:...:...x.:..:....:..::x..-..:.......:..x.::.::..xx.:.....-.:..:..::....x.....x:x..x:....::.........:.xx...:.x.::........:...................:...............:::.......x...:.x-x.........................x:.................................:.......................x......x.:.....x....x.....:..x.....:.....x..x....x...:.x....x.:--x:............x::.x::----..x..::xx.::::.::....:x.x:.---..::.:..:..:.::.x:.:.:..---...x...::x...x:..x..x.::.-----..:::..::x::..xx.:...x..:....----------...xxx..:x.:.:.:x.....x:.:x..:..-----.....:... 49M1I3M9I36M1I31M1I115M1D148M2I21M4D27M3D24M3I25M5I29M10D32M5I9M 394/549 71.8% 576/94230402 0.0% 45/549 8.2% 115331024 74883531 +3058 chr4 + 190214555 148908311 148908310 148908369 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 72875105 NA +3478 chr4 + 190214555 148923061 148923060 148923192 132 TTTTCTTTCTGTCAGCCAATCCTTCTCCCAGTAG---------ACAAAGATATTAGTTTTCTTATGGATTC---------TTCCAGAGCTATTTTATACAATATATACACACACACACTTACACATACACACTTACACACACACACACAC chr4 + 94230402 46140759 46140758 46140905 46140759 46140758 46140905 147 TTCTCTTTTTGT-ATCTAGTC--TCTCACAGTGGTACAGTTTTACAGATATGTGTGCATTCAAATGTATTGCAATAAATGTTACACTATTATTTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTAC ..:.....:...-.x.:.:..--....x....:.---------...:.x..:.xx.:x...xx...x...x---------..x..xx::......:.::........:........x..:...:.:......x.::.:.:...x..x:.. 12M1D8M2D11M9I28M9I70M 90/129 69.8% 147/94230402 0.0% 21/129 16.3% 102782302 87432253 +18122 chr4 + 190214555 148925392 148925391 148925758 367 GCAAGGAA--------AAAGGTCTGAAAGAATTTCTTTACAGAGCTTTTTGTCAGAATAAGGTT-GACTCTCCCCATTTGACCTTCAACTCCCAGGAAGCCTGGGCTTAACTGCTTTGATTTACTCCCATAATAAGGTGATCGATTAATGTGAAAGGCCAGCTTTATGAGGCCTGTCCGGGAATGGTGCTGGAGACTGCTGTAGTGAGAGAGTTATACTGCCACTACTCTAAAAAAGGTCATTGGAAAAGAATCAAAGACAGCATAAATGATGGTTTACACATCA-AAAATCTCTCTGTAAAACAGACAGAAAATGTTGAACTTAATACCTCTTAGGGTTTGGTGCAGAGGTTGTGTAGTAAATATAGTTTGAGTTG chr4 + 94230402 33579024 33579023 33579395 33579024 33579023 33579395 372 GCAAGGAGCAAAATGGAAAGGTCAGAAAGGAGTTTTCTGC----TTTCATCCCAGGATAAAGTTTGTTTTTCCCGGTTTGACCTTCAACTCCCAGAGGACCTGAGTTTAAGTGCTTTGATTTACTTCCATAATAAAGTGATCGATTAATGTTAAAGGCAGGCTTTATGAGGCCTGTCCTCAGACAGTCTCGGAGCCTGCCACAGCAAGGATGTTATATTGCCA-TGATCCACAAAAGGTCACACGGAGGGAATCAAAGACAAGATAAGTGATGGTTTACATATCAGAAAAGCTGTCTGTAGTACAGGCAGGCAGCGTGGAACATGATGTCTCCCAGGGCTCTGTGCAGATGGTATGTAGTAAATATAGCCTGAGCTG .......:--------.......x.....:.x..:.:.:.----:..:x.x:...:....:...-.x:.:....x:...................::::....:.:....x..............:.........:...............x......x:..................xx::.::..x::....x....:::..::..::x......:.....-.:x..:.x.........:xx.:.::............:x....:............:....-....x..x......:x....:...:x.::..x....x.:..::...::....:.:x.......x.x.:..............::....:.. 8M8I24M4D20M1I158M1D61M1I91M 273/362 75.4% 372/94230402 0.0% 15/362 4.1% 115346368 74868187 +3724 chr4 + 190214555 148933973 148933972 148934058 86 TATATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACATACATATACAAC chr4 + 94230402 85834533 85834532 85834618 85834533 85834532 85834618 86 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC ...x::.x.....x...............:.:.xx:....x::...:....:..x.x::..:.x...::.........:.:.:::. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 63099440 NA +3811 chr4 + 190214555 148933974 148933973 148934051 78 ATATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACATACAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x.....x.................:.xx:.:.:x.:...:....:..x...:.x..x...::.:.:.:...:.... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 63099436 NA +3792 chr4 + 190214555 148933975 148933974 148934048 74 TATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACATA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:...x.................:.xx.....x.::..:....:..x...:..:xx...::.:.:.......:. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 63099434 NA +3951 chr4 + 190214555 148933976 148933975 148934053 78 ATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACATACATAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x.....x...................xx....:x::...:....:..x...x:.:.x...::.:...:.:...:.. 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 63099438 NA +3076 chr4 + 190214555 148933977 148933976 148934046 70 TGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACA chr4 + 94230402 79265520 79265519 79265589 79265520 79265519 79265589 70 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA ............::........xx.:.:...:::..:.::.:.::.:.:::..::....x.:.:.x.... 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% 69668457 NA +3398 chr4 + 190214555 148933978 148933977 148934047 70 GTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACAT chr4 + 94230402 70094141 70094140 70094210 70094141 70094140 70094210 70 GTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ....:x:.:.......x...x...x.......:...:......x.:.xx.xx:..x........:..... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 78839837 NA +3285 chr4 + 190214555 148933981 148933980 148934042 62 TGTGTGTGTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATA chr4 + 94230402 70094148 70094147 70094209 70094148 70094147 70094209 62 TATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACA .:.......x...x...x.........:........x.:.xx.x:....:.......::.:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 78839833 NA +3197 chr4 + 190214555 148933988 148933987 148934066 79 GTGTGTGTGTGTGTATGTATGTGTATATATATATATATATAAGTATATATATATACACATACATAT--ACAACATATATAT chr4 + 94230402 79265519 79265518 79265599 79265519 79265518 79265599 81 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTAT .............:....:....xx.:......:...:.::x..::.:.:::.x...:..x::.:.--......:x.x... 66M2I13M 54/79 68.4% 81/94230402 0.0% 2/79 2.5% 69668469 NA +29223 chr4 + 190214555 148944268 148944267 148944768 501 TATCTATATGCCTGTGACCCGGCATCCTTTTGCCTTTAATGAGATTTTGCAGTGACAGGATTGGAACAGATTGCTGGCATTATGGCAGCCAGGATATTGTCAGGAGGAACTTGGCAGTGCTCGTAGGTGTTATGATGCTGGCTCTTTGCTCAAGGGCAAGAATATTAAAGGGAAAATTAGAGATAAAACAGAGAGTGAGAGGTAATGTCAGAAAAGTTCAGAAGATGAAACCAGTAGCGGTAAATATATAGAAAATGATTTGAGGTTTACACACTTTTGAGTCCTTGGTGAGTGAAGACATAGCCAAGAATTGCTTCAGTGATATTCCTTCATAAATCTGCATAATAATCTCTCGGCGGGGCTTTGGTGAAATTACAAGTATTCATTTACTAAATTGGGTTCAGTGTCTGTATCACGCACACCATATGAATATTCAGTGCAGTGAATGCTTCCCAAGCTATGTTGAAGTTAACA-----CATAAGCT------GAATATAACTCAAGTGGAA chr4 + 94230402 33585548 33585547 33586052 33585548 33585547 33586052 505 TACCCACATGCCTGTGTCTATACATTCCCCTGCCTGTAATGCAATTTTGCAGTAGCAGGATTAGAACAGATTGCTGGCATTATGGCAGCAAGGATATTGTTGGGAGTAGCTTGGCAACACTTGTAGGTGTTGTGACGCTGACTCTTTGCTCAAGGGCAAGGACAG-AGAGGTGGTGCTGGATACAGAACGGTAAG--AAAAATGATGTCAGGAAAGTTCAGAAGATGAAAGTAGTGACAGTAAATAAGTCTGAAATAATTTTAGGTTTACATACTTT-AAGTCCTCTGTGACTGAAAACACAGCCAAGAATTGCTTCAGCAATATTCCTTCATAAATCTGCATAATAATCTCTCAGAGGGGCTTTGGTGAAATTACAAGTATTCATTTACTAAATTGGGTTCAGTGTCTGTATCA--TACGCTGTATGAATATTCAGTGCCATGAATTC-ACTCAAACTACACTGAAGTTAGCATGGTCCACAAACTATCTCAGATGATAACTCAGGTAGAA ..:.:.:.........x.:xx:...:.:::.....x.....x:..........::.......:..........................x..........::....x.:.......:::..:.........:...:....:...................:.:.x-.:...x::x::.:..x.:.:...:.x:..--.:.::.:.......:..................x:...::.:.......x:.xx:....:....x.........:.....-:......:x....x....:...:..................::.................................:.x..........................................................--:..:.::................x:.....x.-x.:...:...:::........:..-----..:..:..------..xx........:..:... 165M1D29M2D80M1D137M2D32M1D24M5I8M6I19M 399/494 80.8% 505/94230402 0.0% 18/494 3.6% 115358720 74855835 +14963 chr4 + 190214555 148949912 148949911 148950218 307 CTTAATGAGTTCATCAGCAATGATTTAATACAACACTGAGGAACAGCTTTCTTTAGTCTTTAACTCGCGACAGTTCCCCTTCTATTTGGCAGTACATTAATGGAAATGGAAAATTGCCTCATTCTAAATGTCAGAATAATACTGCACCAAAAACAATTCAGTCATGTCTTTCAAACCACGCACATATGGTTCATCACCAAATGTCACTCTTCTATTTCCCCCTTCCCCCCATGCCCTCCCCGCGCCTGTACCTTCCCTCTGTCTTTCTTTCCATTCGC--CTGTCTCTGGTG---ATAATTGTTTGGATTAA chr4 + 94230402 33588702 33588701 33588969 33588702 33588701 33588969 268 CTTAGCAAGGGCATTGATTATG-CTCAAGAGAAGTTTGAGGAACAGCTTTCTTTAGTCTCAAATTTGCGACAGTTCCCCTTTGAGTTGGCAGTACATTAATGGAAATGGAAACTTGCCTCATTCTAAATGTCAGAATAATAGAGCACCAAAAACAATTCAGTCATGTCTTTCAAACCACGCACATATGGTTCAGCACCAAATGTCACTATTCT------------TCCTCA-------------------------------CTTCCTTTCCATTTGTCACCATCTCTGTTGATTATCATTGTTTGGGTTAA ....:::..xx...::::x...-:.:..x.x..xx:.......................:x..:.:...............:x.x...........................x............................xx..................................................x..............x....------------:..:..-------------------------------...:.........:.:--.::......x..---..x.........:.... 22M1D190M12D6M31D16M2I12M3I17M 224/263 85.2% 268/94230402 0.0% 49/263 18.6% 115361210 74853345 +3003 chr4 + 190214555 148957947 148957946 148958018 72 TGATTCATTGTTATATATATATGTATATATGTATGTGTATATATATGTATATATGTATGTGTATATATATAT chr4 + 94230402 7572239 7572238 7572310 7572239 7572238 7572310 72 TGATTAGTCTTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATAT .....x:.:x.:.xxx.:....:x.:..:.......x.x.x:...x...x........:......x...... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 141385708 48828847 +3062 chr4 + 190214555 148974093 148974092 148974152 60 GACAATTCTTTTTCTTCAAATGTGGCCCAGGAAAGCCAAAAGATTGGACACCCAGGCTCT chr4 + 94230402 43915651 43915650 43915710 43915651 43915650 43915710 60 GATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATGTGCT ..:....::.....x::.......x.....:x...x......x.....::....x.:x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 105058442 85156113 +26774 chr4 + 190214555 148980553 148980552 148981234 682 ATCATTCTCAAGGAACTGGTTTCATTTGTGAATATGCTGAAGCCCAAAAGAATGAAAAACAACAAA--TACTGGTGTGAAA-TGACGCTTTAAATGCATGGGTGCCAGATGGAAAAG--CTTTTGGTCTATTCCTATATTTGATCAATTGGCTTGTCTAATACATTTGACTACGGACGGATGGCCTGACATGACTTCAGATTAGTTTAATAGGGATTAAGGTGGCAAGAAGTGTATAATGCTATGCATTTGTAAGTACAAACATGCTTAGAAATTCATTTATCTTTGGG----GGGTGATGGAGGTTAGTTC-----AAGCTCCAGCTATATTTACAAAC-----------------AGATTCTAGCCACAGCTGAACAGTGTG-----------------------GACTTGGG-----------------GAAAGTAACT---------------------------------GTGCCT-----------------GCCTTTCCTTAAGCCCACAAGGCCTTTTGATTTCTGCCCAAATAAAGCAGGCCTTTGGCATTCAGCTCTCTTAGCTGGCAAGATGTCTGCATAATGTCTGCAGAATTTAGAATGGCCAGGAGGGGCAGGTCAAAGACAGCCAAATTATGATATCATACCCATAAAACCTCATCAATGGTGACATACAGAAAACACTCAGTAAATTGCTTTCATTAATTTAT-CCTTATTAAGAAATTCTAAGCAGTGTCTTCATTCTTTGGCAGATTTCTGATTCTGCCATTTTCCCTTCCT-TCCTTCATTGCTTT chr4 + 94230402 33591738 33591737 33592531 33591738 33591737 33592531 794 ATGATTCTCTAAGAACCAATGTTATTTTTGAATTAGCTTAATCACAAAAGAATTAAAGAGAACAAAATTATTTGTATGAAAATAGTGCACTAAATGCACAGAGGCTAGACAGAAAAAGAATCCAGAGTCATTTCTATCTTTGATCAACTGGCTTGTCTAATCCATTTTACTGTGGATAGTTGGCCTGACATGACTTCAGATTAGTTTAATAGGGATTAAAGTGGCATGAAGTGTATAAATCTATGAATTTGCAAGTACAAACATGTTTAGGAATTCATTTATCTTTAAGGGCAGGAGGAAGGAAGGAAGTTCAAAGTAAAATCTGGATACATTTGTAAACACAGATAATTCTGTGGGAAATTTGGAAAACAACTGAAAACCATGCAATTTCAGCAGTGAATCCTGATGACTTTAGTCAGTTTCTTTGCACAAAAAAGCAATTACTAAAGTCAAACAAGAAAGACCCCAAGATGCAGTACATGGAGAACTGATGTAGAAGTCCTTAGGTAAACCTACAAGTCCTGTTGATTACTGCCCAAATAAAGCAGACCTCTGGCATTCAGCTTCCTGAGCTGGCATGTCAAGCGAATAATGTCTTTAGAG-CTAGAGCTGCCAAGAGAAAGGGACCAGAGACAGCCAAATTATGATATCACACCAATAAAACCTCATC-GTAGTGACATACATAAAACACTCTGTAAATTGCTTTTTGTAACTTTTAATTTATTAAGAGCTTCTGAACTATGTTTTCATTCTGTGACATGTTT---------TCATTTACCTCTCATATCCTTCATTAATTT ..x......x.:....:::.x.:....x.....xx...x..x.x.........x...:.x......--..:.x..:.....-.:::..x:........::.:x..:...::.....:--x.::x.:x::...:....x.........:.............x.....x...::...::.x.......................................:......x...........xx.....x.....:.............:....:...............::.----..:x..x...:.xx.....-----..:x..::.x..:....::....-----------------.:...:x::xx...:.....x.x::..-----------------------.....x:.-----------------:....:..:.---------------------------------..:.x.-----------------.:.:..xxx...:..:.....x...x......x.................:...:............::..x........x.x::xx:.x.........x:...:-:....::x....:...:::x:.::..:......................:...x.............-:.:..........x.........x............:xx...:..x.-x:.........:x....:.:.x:...:........x..:..x:...---------:.....x..::..x.-.........:x... 66M2I13M1I35M2I170M4I19M5I23M17I27M23I8M17I10M33I6M17I105M1D67M1D47M1I46M9D15M1I14M 507/671 75.6% 794/94230402 0.0% 134/671 20.0% 115388815 74825740 +5160 chr4 + 190214555 148987000 148986999 148987189 190 TTCCAGAAGATGAGAGGTGGAGTTGGTTGTGCTAATAAACCCCTGCTTAAGTCCCAGACTCTGAGATGGA-AACAGTGGTGCTTGTAGGAATTCTCATTAAAGACCT-GATCAAACAGGTTTCATTGACTCATAAGCTGCTGTGTTGTTGCTGGGTGTTGGTCCCTTCCTGGCACTTTTATTATTTCCTTGG chr4 + 94230402 33597735 33597734 33597921 33597735 33597734 33597921 187 TTCCCTCAGATGAGGGGGCGGGTT---TGTACTTGCAACCATCTTTCCAAGCCTCAGGCTCCCAGATGGCTAATACTCCTGCTTGTTGTGGCACTAACTACAACCTTAGCTCAAACAGGCTTCATTGACTCATCTGCAACTGAGTTGTTATAGGGTATTGGTTCTCCCTTG--ATTGTGGCTTTTTTTTTGG ....xxx.......:..xx.:...---...:..x::..x.x:..x:::...:.:...:...:x......x-..:.x.xx.......x.x:::x..x.:..x.:x.:.-.x.........:.............xx..x:...x......::x....:.....:.:::.:..--.:.x.x::.x...::.... 24M3D43M1I36M1I63M2D19M 121/185 65.4% 187/94230402 0.0% 7/185 3.8% 115389265 74825290 +3024 chr4 + 190214555 148997327 148997326 148997413 87 CTGTCTCAAAAAAAAAAAAAAAAAAAAGGAAAAGACAAAATATTTTTTCTTAGGCAATATAATTATCATATAATTAGATAATATGCA chr4 + 94230402 69534793 69534792 69534879 69534793 69534792 69534879 87 CTATATTAAGAAAAAAAAATTAAAATAGAAGAAGAAAAAAAAATTTTTTGGTGACTACTCCACCATTATATAAAAAGAAAGTATGCA ..:.x.:..:.........xx....x..:.:....x....x.x.....:xxx.:.x.:x:x.::..:......xx...x.:...... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 79462534 NA +3057 chr4 + 190214555 148999059 148999058 148999131 73 TGTGCCTGTAGTTTCAGCTACTTGGGAAGTTGAGGTGGGAGGATTACTTGAGCCCCTGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.......:..........::.:.:....x:xx.x.:.x:......:...xx:..x..x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 72965854 NA +7226 chr4 + 190214555 149009077 149009076 149009269 193 CTATGTAAGACATTAATGTTTATCCCTTATTAAATGCTGATTCTAATTAAACAAACTCTCTGCCTTGAACAAG-AACATTGATTTTCTGTCTAAGATTTTCATCAATAAAATCATGTTGACTGGTGAGGTT-GAAGTTAGTTATTAAGTCTTAATATATAGTTGTAGCTTAACTGCCATTATTTTTCAAATAATG chr4 + 94230402 33604512 33604511 33604705 33604512 33604511 33604705 194 CCACATAATGTGTTAATGTTTCCCTCTTGTTAAATGCTGACTTTAATTAAATGAACTCTTTACCTAAGAGAAGCAAAATTGATTTTGTGATTTGGATACT-GTCAATAAAATCATTGTGACTAGTGAGATCAGATATTATTAATTCAGAACAAATGTACAATTATAAGTTCAAGGCCATTAGTTGTCACCTAATG .:.::...x:::.........x:.:...:...........:.:........::......:.:...x::.x...-..x.........x..x:.x:...x:.-:.............xx.....:.....:.:-..x:...x.x...x..xx:x...:..:.:..:..:x..x.xx.......x..x...xx..... 73M1I26M1D30M1I63M 135/192 70.3% 194/94230402 0.0% 3/192 1.6% 115404565 74809990 +15286 chr4 + 190214555 149017048 149017047 149017363 316 TTTTCTCCTCACCCCTTTCTTTGGTGCTCTTGGCAATAAGCCCTTTTACTACACAGGTTTTCCAGCAGGTAGTATCTATT-ATTTTTAGCTTAGTTAATGG----CTTACTTACAAACCAGTGAGTCTAAATTATAAAAAATGAGGAATGACTCACATTCATTAAAATGAATTCTGATACATTTGGCTAGTCGCATGAAACAGGGGTACATAATGAGGCG--ACCGGAGGACACGGAATTCATTAATCCATGAGGTGGCAGTGATGCCAAGCAGAGACAGGCAGACATTTCTCTTAGGTCTCATGTGGTCAAAGTAATTATTT chr4 + 94230402 33610328 33610327 33610647 33610328 33610327 33610647 320 tttttttttttgtcattttttAGGTCCTTCT--CAGTGTGTACTTTGACTACATAGGTTTTCCTGCAGGTAATGCTTGTTTATTTTTAGCACAGCTAATGGTGTTCTAACTTACAACATAAC-AGTCTTGCCTTCTGAATATGGGGAGTGACTCACATTCATTAAAATGAATCTTGATACATTTGGCTACTTACATAAAACAGAGGTGCATAATGTGGGGGAATTAGAGGACACGGAATTCATTAATCCATGAGGTGGCAGTGATGCCAAGCAGAGACAGGAATAGATTTTTCACATGTGTCTTGGTGACAAAGTGATTGTTT ....:.::.:xx:.x...:..x...x..::.--..:.:x.:x....x......:.........x.......:.:::.:..-.........x:..:......----..x........xx:.::-.....x:x:.x:x:..x...:...:........................::...............x.::...:......:...:.......x..x.--.:::.......................................................x.x.x....:..x:.x..x..x..xx.x......:...:... 31M2D47M1I20M4I17M1D97M2I101M 240/313 76.7% 320/94230402 0.0% 10/313 3.2% 115406720 74807835 +3262 chr4 + 190214555 149037502 149037501 149037640 139 CTTTCTCTCTCTCTCTCTCTCTGTCACACACACATACACACACACACACACATACACACACACACACGCAGCAGAGGGAAGAATATAATCAGGTA------TTTACAAAGATATAGCTGACTCTAGCAAAAGCTGGTGATTTTTT chr4 + 94230402 75248049 75248048 75248191 75248049 75248048 75248191 143 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaaaaagaaagaaagaaagaaaaaagaaaagaaaATCCTATCCCAAGTATATCATTTAATTTGG--AAAGCTGGTGAACTTTT ...:..................xx..........:.....x.x.x.x.x.x.x.x.x.x.x.x.x.x:x.:x::.:.:.....x.x.:xx.:.x.------x.:x...:x....x::.x.x.:.:.--...........x:.... 95M6I25M2D17M 90/137 65.7% 143/94230402 0.0% 8/137 5.8% 73789453 NA +3064 chr4 + 190214555 149047314 149047313 149047376 63 ATATATATGTGCATATATATGTGTGTGTATATATATACATATATGTACACATATATGTATATA chr4 + 94230402 41749105 41749104 41749167 41749105 41749104 41749167 63 ACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA .:.:....:x.:x.....xx..:....::...:........:......:.x.....x:..:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 107298209 82916346 +3163 chr4 + 190214555 149047330 149047329 149047400 71 ATATGTGTGTGTATATATATACATATATGTACACATATATGTATATATATGTGTGTATATATATACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.::::.:.x:.:..::.x...:..:::....x.x..........x.:...........::..:...:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 126447132 63767423 +3024 chr4 + 190214555 149047339 149047338 149047401 63 TGTATATATATACATATATGTACACATATATGTATATATATGTGTGTATATATATACACATAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC ...:.....::.:.:.:...x.:xx:.x......:..:..........:.:.:.:..:..:.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 101912162 88302393 +4221 chr4 + 190214555 149056352 149056351 149056576 225 TTTAGATAAGTATAGTTATTAGCTACCTAGCTGTTAAACAGGCACAATTTCTTTGAGACTTCAG-TTAACAGTTGTCATTTGGTTGATAATTTGCATTCCTGATTCATAAGCCCAGCCCAGTCTT-----------TAAATCTTCACATTTTGAGGGCACGTATGTGAGGAGGTGGCATATTTAACCTCTTAGTTCAAGTTAAATGTCGTGGGGAATGTGAAATCAGAAAAAAAGAA chr4 + 94230402 33618336 33618335 33618565 33618336 33618335 33618565 230 TTCACAGGAGCATCATTTCTATGTGCATTCCTGCCAAGCAGAAGCAGCACGCTCTGTAATACAGCTTAACAGTTGTCACTTGGCTGATAATTTGCATTCTTAATGTTTCAACTTG---CAGTCATCATTGTCGAGCTGGCCCTTCACCATCCTAGGGCAGCAATGT---GATTTGAAGTATTTAACCTCCTGGATCAAGGGAGCTGAAGCTCTGAATTTAAAA-CAGGAAAACGGAA ..:.x.x:..:..x:..x:..xx.:.x.xx...::..:...:x:..::x:x:.:x:x.x.x...-.............:....:...............:.:..x:x.x.:.:::---.....x.-----------.::x:......xx.::x......xxx....---..xx..:x:...........:.:.x.....xx.:x..xx.:xxx....x.:...-...:....x:... 64M1I50M3D7M11I30M3D54M1D13M 137/218 62.8% 230/94230402 0.0% 19/218 8.7% 115438016 74776539 +3168 chr4 + 190214555 149063440 149063439 149063506 67 TTTGGAGTGGTAATGATAGCAAATAAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTC chr4 + 94230402 60492354 60492353 60492420 60492354 60492353 60492420 67 TTTGACATGGGGAAGATGGGAAATACACTTTTTCTTCATTTCTATCTTTTTTTTTTTTTTTTCTGTC ....:x:...x:.x...:.x.....x.x.x...:..:x...:.x.:................:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 88571086 NA +3038 chr4 + 190214555 149067466 149067465 149067528 63 GGGGGGGAATAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGAAGGAAGGAAGGAAGGCAGGTA chr4 + 94230402 5291323 5291322 5291385 5291323 5291322 5291385 63 GGGGAGGAGGAGAGGGGTGGCGGGGGGGAGGAATGCAGAGGCACAAAGGGAGGATGAAAGGCA ....:...:x......:x..x...:......:.x.x.....x.x:....:....x.:x...:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 143776143 46438412 +3215 chr4 + 190214555 149077731 149077730 149077892 162 CAAAAAACTCCTGTATCTCTTTCAGTCTTA-------------CTCTTCTGTAAACATTTTGTTGTATTCATCACATTTTCTCTCTCT---CTTTGTTTCTCCTTCCTTTTCTTCTCCCTCCCTCCTCCCCCCACCCCCACTCCCCCATATACTATTCCTTTGCTGAACTATTCAAGA chr4 + 94230402 31281798 31281797 31281968 31281798 31281797 31281968 171 CAAGCAACTCCTGGAACATTATCAGTGACAGAGCATCCCCAGCTTCCTCAGTATGCATCTC-------TCATCTTTCTTTGTGTGTCTTTTCTTCATTTATCCATACTTTTCTTCCACACCCTTATGCCCTCCCCCCCCCCCCCCCCCAATTTCAGTTCATTTCTTCACTGATCAAGA ...:x........x.x.x:.x.....xx:.-------------:..:..x...x:...:.:-------.....x:x:...x.x.x...---...::...x...x.x.........:x.x:..:.x:x...:..x.....x.:.....xx..x::.x.:.x..x..xx...:x...... 30M13I18M7D20M3I87M 101/155 65.2% 171/94230402 0.0% 23/155 14.8% 117795933 72418622 +10010 chr4 + 190214555 149110334 149110333 149110630 297 AATAAAAGTTAACCTGCTTTGAATTGAGTTCCTTCTTTCCTGCA-GTACCCTCTTTGCGG--------------GTTCATAGACATCTGATAGCTCAGTTTTGTTCTA-ACTTAAGTTAAAATTATGACTGAAAAAT-GTGGTTGAAGGTTAAAAATCAATTAAATGGTAATTACAGTTATTTGTTTTAAAAGTTCAGGTAATATTTTATACCATGAATCTGTTGGATGACAGTTGATATGGATTAATCA--GCAACCTGCTTTC-TCTTTGATCATGATTCACATCTGCTCTGGACAGGAGTGACAATAAGGAAAT chr4 + 94230402 33628479 33628478 33628784 33628479 33628478 33628784 306 AATGTAAGCTAACCTGTAATAAAT-GCATTCTTTCTCTGCTACACATATCTTTTTTACAGCGTTTTTCTTCACAGTTTATATGCAGCTGCTG--------TTCTTCTATGCTCAGGT--AAATTACCATTGAATAATTGCAGTGCAAGGTCAAAAATCAATTAAATGAAAATTACAGTTATTTGTTTTAAAAGCTCAAGCAATATTTTATATCACAAGTCTCTTAGGTGGCAGGCCAAACAGGTTAATCACTGCAACCATCTTCCTTCTCTGCTCCTGACTCTAATCTGCCTTTAGCAGGAGTGCTAGAAAAGGAGT ...:x...:.......:xx.:...-.x:...:....:.x..:..-:..:.:.:...:.:.--------------...:...x:..x...x.:--------..x.....-:..:.:..--......:x.:....x...-.::..xx.....:................:x........................:...:.:...........:..::.:...x..:.:..:...x:x.x.::.:.......--......xx...:.-...:..x..x...:..xx......::.x::........x:.:x..:.:.:. 24M1D19M1I15M14I18M8D8M1I8M2D18M1I112M2I13M1I51M 207/286 72.4% 306/94230402 0.0% 31/286 10.8% 115481855 74732700 +12609 chr4 + 190214555 149120150 149120149 149120494 345 TTCTGGGCTACATGATTTTGTGCTTGATGGTTTAGGTTTCTACTGTATATTTCCTTTAAAGAAAATCTT----ATTTTCTAACATAAAACCTCAGCAGGCCTGCACTTAGCTAACAAGGGGAAAACTCTGTCCCAGTTTTCCATAATACATTCACGAAGGGATTTGAAACAACCAACAGTTATTGCAG-AGAAAAATGAAAGAATGTTGTTTGCTGGCATTTTTTAAAATAAACACAAAAGTTCAAGCACTATAGCTATTAAGCTCTTTGTAGGCAACATAAACACTGGCTTATTTCTGACCCCCTATAATCCTAAAATCAAGCCCAGCCTTCATTTTCTGTTGTAATTT chr4 + 94230402 33629838 33629837 33630180 33629838 33629837 33630180 343 TTTTGTGTAACATGCTTATATGTGTAAAA---TGAGCTTCTACTGTACTTTGGCTTTAAAAACATTATTCACTGTTTCCTAGTACAAAGCCCCAGCAGGCATGCACTTGGCTAGCTAGTGAAGAACTCTGCCCCAGTTTTCCATAATGCATTCATGAAGGGATTTGTAACAACCAGTGGTTACTGCAACAGAACGACTAA--AATGTTGTACCGTGGCA-CTTTTGAAACAAACACAAAAGTTCAATTGCTGCAGCTCTTACAGGCTAATGATGTGCTGTAAACACTGGCATATTGCTAGCAATGTATAATCC-ATACTCAAAGCAGCCATTCATTAAGTCTTATAATTT ..:..x.:x.....x..x.:..:x.:.x:---.::.:..........:x..xx.......:.x.x.x..----:...:...::.:...:..:........x.......:....:.x..x.:.:.......:................:......:...........x........:::....:....:-....x:.:x..--........x:xx.....-:....:...:................x::..::....x...x:xx..xxxx.x.::x::...........x....x..::.xx:x........-.x.x....:x.x:x.x......xxx.x..:...... 29M3D37M4I115M1I11M2D17M1D93M1D36M 240/338 71.0% 343/94230402 0.0% 12/338 3.6% 115490312 74724243 +3214 chr4 + 190214555 149123804 149123803 149123877 74 GTGCACCTGTAGTCCTAGCTACTCTGGGGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.......:x:::.......x.xx.x...xx:...........:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 73090600 NA +3021 chr4 + 190214555 149144040 149144039 149144106 67 TTTCCTTTCCTCTTCCTTCCCTTCTCCCTTCCTTCCTTCTTTCCTTCCTTCCTTTCCTTTTCCTCCT chr4 + 94230402 40564849 40564848 40564915 40564849 40564848 40564915 67 TCTCCTTCCCAGTTCTTGCTGTGCTGCCTAACTTCCTTTTTTCCTTCTTTCCTCTTCTTATCTTTTT .:.....:..xx...:.x.:x.x..x...xx.......:........:.....:.:...x..:.::. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 108579191 81635364 +3353 chr4 + 190214555 149144123 149144122 149144174 52 TTTCATGTTCTTCTTCTTCTCCTTTTCTTTCTTTCTTTTTCTTTCTTTTTCT chr4 + 94230402 65084412 65084411 65084463 65084412 65084411 65084463 52 TTGCACGTTTTTCTTCATCTCCTTTTCTTTCTCTCTTCTCATTTTTTTTCCT ..x..:...:......x...............:....:.:x...:....:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 84059711 NA +3783 chr4 + 190214555 149144204 149144203 149144357 154 CTCTTCCTTCTCTTCCTCCTTATTCTTTGTTTTCATTTTCTTCTTCTCTTTCTTCTTTTTCTCTATTTCTCCCCCCTTCCTTCCTTTCCTCTTCCTCCTCCTCCTCTTTCTTCATCTTCATTTTCTTCTTCTTTCTTTCTTTCTTTCCTTTCTT chr4 + 94230402 2019388 2019387 2019539 2019388 2019387 2019539 152 CTTTCCTGTCTCGATTTCCTATTGCCTT--TGTCAGTTTCTTCTGCACTTTCGTCTATCTCCCCCATGATTCTCCAGCTCTGCTTTTCCTCTGCCTTCTCCTGTCTTTCATCTGTCTGGCTCAACCTCCTTCATCTTTCCATCATCCCTTTCCT ..:.:.:x....xx::....xx.x.:..--.x...x........x.x.....x...x.:..:.:xx.xx.:.:..xx::..x.:........x...:.....x:::..:x.:::...xxx.:xx.:..:.::x......:x..x.:......:. 28M2D124M 92/152 60.5% 152/94230402 0.0% 2/152 1.3% 147124816 43089739 +3073 chr4 + 190214555 149144240 149144239 149144313 74 TTTCTTCTTCTCTTTCTTCTTTTTCTCTATTTCTCCCCCCTTCCTTCCTTTCCTCTTCCTCCTCCTCCTCTTTC chr4 + 94230402 49829835 49829834 49829908 49829835 49829834 49829908 74 TTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC ..:.x.:....x.xx...x.....x:.:......::.:::..:::.:.......::..::..:..:....::.. 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 99314405 90900150 +3289 chr4 + 190214555 149144241 149144240 149144329 89 TTCTTCTTCTCTTTCTTCTTTTTCTCTATTTCTCCCCCCTTCCTTCCTTTCCTCTTCCTCCTCCTCCTCTTTCTTCATCTTCATTTTCT chr4 + 94230402 60463922 60463921 60464010 60463922 60463921 60464010 89 TTTGTTTCCCTTTTGACTTCTTTGTACAGCTCTTCTCACTTTTTTCCATGCTTCCTCCCCCTCCTGCCCTTTTTCCATCCTTAGTTTCT ..:x.:.:.::...xx::.:...x.x:.x:...:.:.x...::....x.x.:..:...:......x.:....:.:....:.:.x..... 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 88680319 NA +3227 chr4 + 190214555 149144324 149144323 149144440 117 TTTTCTTCTTCTTTCTTTCTTTCTTTCCTTTCTTTTCTCTATTTCTTCCTTCCTTCATTCATTTGTTCTTTTTATTCTTTCTTTCTTTCTTTTTCTCTTTTTCCTTCCATTATATTT chr4 + 94230402 37898161 37898160 37898271 37898161 37898160 37898271 111 TTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTT-----GTAGGGACTGTTATTTCTTTGATGCTTTC-TTGTCACTGTCTCTTTTTATTTTATTT .......:......x.....x......x...x.:.:..x.x..xx...:x.:...-----:.xx.xx..x..xx......xx.x.....-..x..x..x.:..:..::...x..... 55M5D29M1D27M 78/111 70.3% 111/94230402 0.0% 6/111 5.4% 111246163 78968392 +12403 chr4 + 190214555 149166476 149166475 149167060 585 AATGGGCCTCAAACTAATTTTTATCTTCTTGTCATCCTG-GATAGATTCCCTAAGAGACAATAATGAAAAGTGCAGAGAAAAAATTCCTACCAGATGAGAATAGTAAATTGTGTTTTGTCAGCCAGCTTTGGACTTTGTCTCT--------CCTCTTCTAAGGAATCATACAAAGAATGTGTGAGCTGA----GGAGTATGA----------------GGCGACATTTTTCTGAAACTGATAATGAACACAGAGCCAAAACTGCAACCCAAGGTCACAGATAATGGAAAATACACCATAGGCATTTTCATTGCCTTTATGTTTTTAATGATGTCCTCATTGTCTCTTATTGGGTTTTTGTTTTGTTTTCTTTTTACAGTTGCTTATGTTTCCTGCTCTTTGCCATTTGCTCTAAGGCTGCCACTAGCACTTCCATAAAATATCTTAATGGCCCCCCACAGGGCTTTGGTAGTGAAGGGTCTGCTAATGTTTCCATGATGACCCTGGTCTTGAAGATCTTTATATCACAGTCATCTTAATTTGCATTAGACCATGGGGAACATATCACGTAGGTCAGTCTTGGAAGCACTGTTT--TTGGTATGTGTGAAAAAATTT chr4 + 94230402 33644499 33644498 33645070 33644499 33644498 33645070 572 AATGGAGCCATATCTAATTTT-ATCTTGCTGTCATCCTACGGTGCATTCCCAGTCACGTAATAATAAAGAGAACAGAGGTAAGGCTGAGAAGAGAGGAGAATAGTAAATTGCTTTTTGACAACTGCCTTCTGACTTTAAGTTTCACACACACCTCTTCCCCAGGCCTAT---AAAAGTGTACGTACCGAATTCAGCACATGAAAATGTAAGAAGTCATGGCAATATATTCCAGA-----ATGATGAA---AGAAGCAACTTTATA---CAGGGACATAGCTAATGGGAAGCCCA--AAAGGAATTTTTAGTGCTGGCAT-TTTTTAATGCTCTCTTC-TTGT------TTAGG----------GGTGCTTTATTACAGTCAAT---------TGCTCCTCCTCATTAACTTATAGTTTGGCGCTGATAGCTCTATAAACTGTCCTAACAGCCCCCAAGAGTACTTCTGTAGTGAAAGATCTGGTTGTGTTTCCATTATAAACCTACTTTCAGAGATATTTATAACTCAGCCATTTTAATTTGCATCAGGCTTTGGGGAACTTGGCTCACAGGTCAGCGAGTGAAACAATTTTCAGCTTATGTATTTGAAAAGATTT .....:x.:xx.x........-.....x:.........:-.:.:x......x:xx.x::......:..:..x:.....:x..:::.xxx.xx...x...............:x.....x..:.::x...:x......:xx.:.--------.......:xx:.:x::..---..:.:...::.x:.:..----:.x::....----------------...:.:..x..:.x..-----..:.....---...:x...xx:.::.---..:..x..:..x......:..::x..--.x...x.....:.x...:xx:..-.........x.x..:..-....------..:..----------.x.x::..x.......::x.---------.....:.:x:....x:..:xx..x:..x.:..:::.x:..:.....x.:..:...::......x.x..x:...:x........:.:....x.x:.........x..:.x...:x.:.:::....x......x.x...:...:...........:..:.:x........x.:x.x.::.......:xxxx...:..x.x..:--:.x:.:.:.x......:.... 21M1D17M1I103M8I18M3D17M4I9M16I16M5D8M3D15M3D26M2D23M1D17M1D4M6D5M10D20M9D201M2I21M 359/541 66.4% 572/94230402 0.0% 75/541 13.9% 115521977 74692578 +3115 chr4 + 190214555 149171686 149171685 149171744 59 CATCTGACAGATGAAGAAATTGAGGCGCAGAAAGTTTAAGTGATTTGCCTAAGGTCACA chr4 + 94230402 82283127 82283126 82283185 82283127 82283126 82283185 59 CATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACA ...:.x.:.x...::....:..:.:.:...:x..x........:.x:............ 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 66888559 NA +3366 chr4 + 190214555 149189741 149189740 149189799 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...x.:........::.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 73156535 NA +3127 chr4 + 190214555 149215070 149215069 149215164 95 TGCACTTTTAGTCCTAGCTACTTGGAAGGCTGAGGCAGGAGGATCACTAGGGTCCTGAAGTTTGACTTCTGCCTGGGCAACATAGCAAGACCCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT----------TGGGCTGTAGAACATGATGCCA .....x.x....:.:.........:.........x.xx.x.:.x....x.:::..x....:..----------.....x::.x.:..x..:x... 63M10D22M 60/85 70.6% 85/94230402 0.0% 10/85 11.8% 73181865 NA +3182 chr4 + 190214555 149238383 149238382 149238451 69 GGGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTATGGTTGTGTGTGTGTGTTTGCCATTTCCGTTG chr4 + 94230402 49490664 49490663 49490732 49490664 49490663 49490732 69 GAATGTGTAAGAATGTGTGTGTGTACATGTGAGAATACAGTTGTATGCATGTATTTGTTGTATTGGTTG .::.....:x..:...........:::....x.x:..::.....:..::...:....:::.x.:x.... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 99747719 90466836 +8101 chr4 + 190214555 149256121 149256120 149256342 222 AAGTTTGCAAAACACTTGGCGTCCATCAAGCAATGTGTAGGTGGACAGCTTTGCTCTCAGTAAATCAGAAACAAGGAGTAATAATTAGGCTTCATTTTACTTTCCTCCACAGTGCTGGATTGCTGGTTCTGTATGCGTGCTGGGAAACAATCACACTCTAACTGTAGCTGCCTAGGTCTTCTGATGCCATGTTACAGATGGCCTGTGACCTGGGAGCACCCA chr4 + 94230402 33668996 33668995 33669208 33668996 33668995 33669208 213 AAGTTTGCTAAAAAGTTGGCATCGATCAGAC--TGTGTGGGTGGACAGTATCTCTCTTTATGCACTAGGAACATGGAGTAATGATTAGGCTTCTGTTTTCTTCACTCACTTATGCTGGCTTGTTGCTACTGAACATGTGCTAAAATACTATGGTGCTTTACCCATAG-----TCAGTCTCC--ATGTCATGCCACAGATGGCAGGTAACCTGAAATCACCCA ........x...x.x.....:..x....::.--.....:.........:x.:x....:x:.:x.::..:....x........:..........xx...x...:x...xx:x:......x...:..x.x...x.:::.....:::.x..x..x:::..:..x.::...-----.x:....:.--...:....::.........xx..:.....::.x...... 31M2D134M5D9M2D39M 148/213 69.5% 213/94230402 0.0% 9/213 4.2% 115587125 74627430 +3300 chr4 + 190214555 149269318 149269317 149269486 169 GCTAACTATATATATATATATATATA-TATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGTGTATATATATATTTGTGTGTGTGTATACATATGTACATAT-----ATATTCATTCAATCCCTGGTAAGACAAAAAGATTCTTATTTCTC chr4 + 94230402 89812941 89812940 89813109 89812941 89812940 89813109 169 GCTCAGTTTATATGTTAGTGTTTGTGGCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGT------ATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTTATGAACAGGCATGTAAGAAAAATGAATCAGTATTTTTC ...x.x.x.....:.xx:.:.x.:.:-:.....x...x....:.:.....x..x..::x.xx.:...::::..x..x.x:...:..------..:.x:............:..:......x:.x..-----:.x..:..xx.xxxx.xx......x...x::..:xx.....:.. 26M1I59M6D34M5I44M 103/163 63.2% 169/94230402 0.0% 12/163 7.4% 59456377 NA +3261 chr4 + 190214555 149269342 149269341 149269421 80 TATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGTGTATATATATATTTGTGTG chr4 + 94230402 40730003 40730002 40730082 40730003 40730002 40730082 80 TGTACACATTTGAAAGTACATATGCAGATATATATGCACTCACACATGCACACGTATGTGCCTCTGCGTGTGTTCTCGTG .:..:.:..x.:x.x:..:....::.x........:...x......::.....:......:x.x.:::.:.:..:x:... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 108539339 81675216 +3285 chr4 + 190214555 149269343 149269342 149269417 75 ATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------TATGTGTGTATATATATATTTG chr4 + 94230402 23247722 23247721 23247807 23247722 23247721 23247807 86 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------..::..x:..x........x.. 53M11I22M 55/75 73.3% 86/94230402 0.0% 11/75 14.7% 126021621 64192934 +3172 chr4 + 190214555 149269366 149269365 149269415 50 TATATATATATACACACACACACACACACATATGTGTGTATATATATATT chr4 + 94230402 89823932 89823931 89823981 89823932 89823931 89823981 50 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATT .......:x....................x...:xx.:......::.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 59445434 NA +3137 chr4 + 190214555 149269369 149269368 149269462 94 ATATATATACACACACACACACACACATATGTGTGTATATATATATTTGTGTGTGTGTATACATATGTACATATATATTCATTCAATCCCTGGT chr4 + 94230402 22600198 22600197 22600289 22600198 22600197 22600289 92 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGC--ATGCACGTAAGTGATAGTGAAAATCCTGAT .:.:.:...:x....::..x.....:::..:::x:x....:...............:...:.--...:..:..x:.:x.x:.xx..x:....:. 62M2D30M 59/92 64.1% 92/94230402 0.0% 2/92 2.2% 126669171 63545384 +6955 chr4 + 190214555 149303509 149303508 149303826 318 GTTTTCGTGAAGAAAATTACTATAGTAGTTTTAACATAAAA-----GGATGCCATTTTGCTTTTC-TCAGGGCATCTGACACAATTGGACAAAAAGATCAAGGTGTTCGTGACTGTCTGATCTCAATGGAAAATACTTTTGGGGGTTTTAATATACAGCACTTCCATTGATACCAGATCTGGCAG----TTAGAAATACATGGAAAAT--TCAACAAATGTGAATCAGGTTTTCACGCAGATCTCCATTAAGAGATCTTGGACCATCTCCAGAATTCAATCAAAGGTTAATGAAAGAACTATACTGTATCTGACTGCAGACACTGTTGCT chr4 + 94230402 33696040 33696039 33696350 33696040 33696039 33696350 311 GTTTTTGTCAATCAAAATGCTGACTCTGCTTTAATTTTAAACATACGGATGTCATTCTCTTTTTCCTCAGAGGCACGGATGCAACTGAAGAAAAACATTAAGTTTCTGGAGGGAGGCCAAGCT----GGAGAGCAGCAGCGTAGG-----ATATACACTGCCTCCATTGACATCAGATCTGAAAGCAGATCAGATGTGAATGGAAGACCCTCA------GTGAGTCAGGTTTGCATGTAAACTTCCACCGTG----CCTGGATCAGCTCCAGAAGCTTATGCGATATCAGTGAAAGAGCTGCACTGTATCCGCACTCAGATACTTCTGCT .....:..x..xx...x.:..:xxx:x.:.....:x.x...-----.....:....:.x:.....-....:.xxx.x..::...:..:.x.....x..:...x.x:.x.x.:xx.x.::.x..----...:.::.x:xx:.x:..-----.......x::.:........:.:........:x..----.:...x:.:x......:.:--...------....:........x..:.:.:.::....:::x.----.:....:..x........x::x..xx:.x:.:.:.......:..::........:.xx:x....:...x:.... 41M5I19M1I57M4D18M5D35M4I19M2I3M6D33M4D74M 194/299 64.9% 311/94230402 0.0% 31/299 10.4% 115607469 74607086 +3026 chr4 + 190214555 149325491 149325490 149325524 34 AACTGATGTTTGCATTTACCTTTTTTTTTTTTTT chr4 + 94230402 65196468 65196467 65196501 65196468 65196467 65196501 34 AACTGATATTTGCATTTACCTTTTTTTTTTTTTT .......:.......................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 84129023 NA +38272 chr4 + 190214555 149349420 149349419 149349969 550 CAATTTAAGAGATGTAACAAACCTGAATCTTGACCTTGCATTGTTTCTGTTTTTTTCCTTAATGCACTTTTAT----TTAATTTGGCTTAGCTATTTTAAAGATCATATTACTGCAGTCAGAAGCAGTGTTTTAGAATTCAGCTGGGTCACAGGAACTTTCTCACCACTCCATTCTAATTTGCAGTTTTGCTATAATAAAAGCCCTAAATATATTGCTACTGTCTAGATGTTTTATCTGAAACAAGTGTCCTTTGTAGTCTCAGAGGACTCTTCTATTTTATTTCCAGTAAATCAAAGTCTGTGAAGAGCTTCAGTTTTTATTAAGACATACCCTTCACAGTCCAGTGATTGCCAACTGTGGCAAGCCATTGACAGTTCATTTACATATAAGTGATGACTTCCATCAGGTAGTTGGCTCAAAAACACAATGGACATTTAGAGCATATCCAATATTTCTTGTTCTTTGATGAGCACCAAGTGCCAATTTTTATATAGAAACTGACTACTGAAAAGTGAAGGCTTCTTTTCCATGACCTTACACTGTCTTCTACAG chr4 + 94230402 33704373 33704372 33704910 33704373 33704372 33704910 538 CAGTTCTGGAGTTCTTGCAAACCTGAACATTGACCTTGCACA---TCCTTTCTTTCCCTTTTTGAAGCCTCATGAACTTAATTTGAGTG---TGTTTCAAGGATCA----------GTCTGAAGCAGTGTTTTTGAACTCAGCTGGGTCATAGGAACTTTCTCAGCACTCTATTCTAATTTGCAGGTTTGCTATAATAAAAGCCCCAAATATATTGCTACTGTCTAGACATTTTATCTGAAACAAGTGTCCTTTGTAGTCTCAGAGGACTTTTCTATTTTATTTCCAGTAAATCAAAGTCTGTGAAGAGCTTTGGTTCTTATTAAGATGTACCCTTCACAGTCCAGCGGTTGCCAACGGAGGCAAGTCATTGACAGTTCATTTACATATAAGTGATGACTTCCATCAGGTAGTTGGCTCAAAAATACAATGGACATTTAGAGCATATCCAATATTTCTTGTTCTTTGATGAGCATCAAGTGCCAATATATATATAGAAACTGACTATTGGAAAGCGAAGGCTTCTTTTCATTGACCTTACATTGTCTTTTGCAG ..:..:x:...x.x.x:..........:x...........:x---..:x..:...:....xx..x.x::.:..----........:x.x---.:...:..:.....----------...x.............x...:............:.............x.....:..............x...................:......................::........................................:.........................................::...:.........::.................:.:........x.x......:.........................................................:.................................................:...........x.x.................:..:....:..............xx..........:......:.:... 42M3D28M4I12M3D14M10D438M 472/534 88.4% 538/94230402 0.0% 20/534 3.7% 115645047 74569508 +3096 chr4 + 190214555 149354224 149354223 149354293 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 73321027 NA +3022 chr4 + 190214555 149356223 149356222 149356271 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 96575761 93638794 +3933 chr4 + 190214555 149368689 149368688 149368867 179 AAATACAGGGTAATAAAAGTTAAAGACATTAGAGTCAATGTGAAAGGCACA----AATTATATATATACATGTATATATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATAC chr4 + 94230402 21109122 21109121 21109302 21109122 21109121 21109302 181 AATTACTTGGTGATGAAATGTCAAAGCATCGGTGT--ATGGGCTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x...xx...:..:...xx.x..::...::.x..--...x.xx::..::.----..xx...x:x.x.:x..:x....:..:.:.::x.x.:.:x:.:.:.x.....:...x:.:......x:..:..:x.....:...:..:x....:x.x.:.:..:..:.:...:x..:.::..::.:.. 35M2D14M4I128M 104/177 58.8% 181/94230402 0.0% 6/177 3.4% 128259567 61954988 +3491 chr4 + 190214555 149368742 149368741 149368843 102 TTATATATATACAT--------GTATATATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATAC chr4 + 94230402 21109193 21109192 21109302 21109193 21109192 21109302 110 TTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC .....:..:.:::.--------.::...x.....:...x:.:......x:..:..:x.....:...:..:x....:x.x.:.:..:..:.:...:x..:.::..::.:.. 14M8I88M 65/102 63.7% 110/94230402 0.0% 8/102 7.8% 128259549 61955006 +3053 chr4 + 190214555 149368750 149368749 149368816 67 ATACATGTATATATATATATACATATATATACATGTATATATATACATATATATACATGTATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ........:..:..:.:...:x::.:..:.x.......:.x....:.:......:xxx:......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 103305451 86909104 +3527 chr4 + 190214555 149368776 149368775 149368898 123 ATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATACACGTGTATATATATGTATATATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATAT--------GTGTATGAATATGCATGCACA ..x.:.x.:..:..:.:.::x.x.:.:x:.:.:.x.....:...x:.:......x:..:..:x.....:...:..:x....:x.x.:.:..:..--------......:x.....:..::.:. 94M8D21M 72/115 62.6% 115/94230402 0.0% 8/115 7.0% 128259589 61954966 +3748 chr4 + 190214555 149368800 149368799 149368916 117 ATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATACACGTGTATATATATGTATATATATACACGTGTATATATATG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x.:.x.:..:..:.:.::x.x.:.:x:.:.:.x.....:...x:.:......x:..:..:x.....:...:...x.:..:x.x.:.:.:...:.:...:x.::..:..::.:.:. 117M 69/117 59.0% 117/94230402 0.0% 0/117 0.0% 128259613 61954942 +10808 chr4 + 190214555 149376360 149376359 149376973 614 CAATTTTTAAATAATGGGATTTTATAAAAAGACTGAATAAAGGACTCTAAAGCGATAAACTGCAGAGAGATACAAGATGCTATTGCCAAAAACCAGATAGCATTCAATTAGTTTTTTTTAAGGCATTCTTATCACATCTCCTCCTAATATTAGCTTTCTCAATAAACAATAGCCTGCTGCAATATTGCCAGGGTTGCCCAGCTGAGATGACAATGTGCAGTGACAGATGAT-----TGGGATCATCCGAAACTGTTGATGTTATTCACAAATGGCACTCA-CTGGTCCTTTAGTATAGGAGATTATTTTATGACTCTAACATGAAACCAGATTAATATTTATGTGGTAAGAC---AGATAAGAAATGCATTTTT-------------CTGCAATAAAAAAATTAAA-----------CATATTTTTTGG---GTCCATTTTCAGCTATTAACTTTTATCTAATTGAGTCTGATATGTACATAAG--ATAATGAGCACACACATCTTTCTGCTCTTTGAAAAGGCTTTAAATCTTGTATGACTATTCAAGACCTTAATTTAGGCTTTCAGATTGTATTTGCTTTAAATGAAGGAAAAATCAGTA--------------GGGTAAAAAATATCTACAATTTAATATAATAATGCTACCACTCATACTG chr4 + 94230402 33717440 33717439 33718071 33717440 33717439 33718071 632 CAATTATTAAATTACAGGGTATTA-ACAGAAACTAAATAAAGCACTCTGAAAAGATTAATTCTGAAGA--TGCAAAATTCAAATGCCAGA---TAGAGAGCGTGCAATTAGGTTCTT--AAATAATTCTTACCACATTTCATGCTAATATTAGTACTTCCAAAAAACAATAGAAAACTGCAATACTCCCAGAGACACTCCATTGAAACAGCACAGTG-AGGCACACAGAATGCATCTTGGTGAATTTTTATCTTCTGATGTTATGTACAAATAACATTTATCTCCAGCTACAATAGTAAAAATCATTTTG-GTCTCT------AGACAGAATTAATATTTATGTGATGATACTGAGGAAAAAAAAAGTGGTTTTGTTTTCTGAACGAATGCAATAGCAAAGACGAAGCTGTTCTACTCAGATTTTTTGGAGAGCTCAAATT-AGC-ACAAACTTTTACTTAATTGGGCTCTTCAAGTAAGTATGCAGCAATGAGCATTAGTCTCTCCTCATTGCTT--------TTTAAAACCTTTCTGTCTATCCAGGTCC----CATAGTCTTACAGATTTTAATGGTCTT-AATGAAGAAAAA--CAGCACTGTTATTCAATTTGAGTCAAGCAGATCT-CCATTCAGAATGACAATGTCTCCATTCACAATG .....x......x.::..:.x...-.x.:.:...:.......x.....:..:x...x..:.x:::...--.:...:..x.x.x.....:.---:...x...:.x.......x..:..--..:xx.......:.....:..x.x..........:x:.::...x.........xxx:........:.x....:.x::.:.x::...:.:::..xx...-..xx...x.x:..-----.x..xxx..::xx.x..x:.........x:......::..:.:.-..xxxx..x:.:..xx::.:..:.....:-.x....------.:..x::...............:.:.x..---:..x..:...x.::x....-------------x.......:x...:x::..-----------..x.........---.::..xx..-...-.:x........::......:.:::xx:.x...x:..x.--::........:xx::x...::::::.x:..--------......x.:.x.x..x....:..:.x..----:x...x...x......x..x.x.::..-.......:....--...:.--------------.:..x..:x.x....-.x...:.:x..:.:....::x...:...:.x.. 24M1D43M2D20M3D24M2D98M1D13M5I44M1I29M1D6M6D29M3I19M13I19M11I12M3I9M1D3M1D38M2I30M8D28M4D27M1D12M2D5M14I15M1D33M 385/580 66.4% 632/94230402 0.0% 86/580 14.8% 115658920 74555635 +3537 chr4 + 190214555 149388486 149388485 149388565 80 ATATATGTCCAAATATATATATATTAT------ACATATATATTA----TATATATTATATATTATATATAATATATATAATATATTTAT chr4 + 94230402 26320214 26320213 26320303 26320214 26320213 26320303 90 ATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTAT ....:.:.:.....:.xx....x.x..------.x..x...x.:.----......:..:............x......:........... 27M6I12M4I41M 64/80 80.0% 90/94230402 0.0% 10/80 12.5% 123068272 67146283 +3182 chr4 + 190214555 149388499 149388498 149388566 68 TATATATATATTATACATATATATTATATATATTATATATTATATATAATATATATAATATATTTATA chr4 + 94230402 26320246 26320245 26320313 26320246 26320245 26320313 68 TAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTA ..x..x...x.:.:.::......:..:....xx......:......:.......x..x...:.x.x.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 123068253 67146302 +3577 chr4 + 190214555 149388556 149388555 149388655 100 ATATATTTATATACATAAATATATATACATATATACATATATACACATATATAGGCAAAGAATATATATATACACATATATGGGCAAAGAATATAAAATA chr4 + 94230402 23247722 23247721 23247812 23247722 23247721 23247812 91 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATAT---------ATATGAAATA ..:.:.x...::...:.x..x...:x......:....:.:.......:.:.:.:.x...:..xx..:..:x.:.x......---------....:..... 81M9D10M 64/91 70.3% 91/94230402 0.0% 9/91 9.9% 126140834 64073721 +3068 chr4 + 190214555 149388746 149388745 149388789 44 TATATAATATATATATGACATATATATATACACACACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....:.....:...xxx.:......................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 118554553 71660002 +3077 chr4 + 190214555 149388748 149388747 149388791 44 TATAATATATATATGACATATATATATACACACACACACACACA chr4 + 94230402 30834193 30834192 30834236 30834193 30834192 30834236 44 TATACAATATGTATTATATATATATATATACACACACACACACA ....xx....:...x.:...........:............... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 118554555 71660000 +7014 chr4 + 190214555 149403183 149403182 149403413 231 ATATTTATAGA--TTGAAACTACCTTTCCAGATTGCTGATTTCTTTCCAAACAAAATTTCTTTTTACTTTTTTTCCTCTGGCACAAGTTCCTGCATGTAACAGCAGGAATACAAATTATGTCCAAAGCACTTACGTAGTTGGCAGAAGTATTTTCTCTTCTGCAATAAATTTATCAAACATTTTT--CAAAACAGTAAATCCTTGAAAACAAGGGCTGAATTCCAAATAGGATCA chr4 + 94230402 33721994 33721993 33722218 33721994 33721993 33722218 225 ATATTTCTGAAACTGAAAACTACCTATCC-------TGGTTTATTTTCAAGCAAAATTTACCTTCACTTATTTTT-TATAGCACAAACTTCTGCATCTAACTGTTGGGACACAAAATATCTCCAGAGCATTTGCAGAGTTGGACAAAG-ATTTATTGCTCTGCCAGAAAATCATCAGCAATTTTTCCCAGAAATTTAAATTCCT-AGTTTAAGAGCAGAACTCCAGTTACGTTCA ......x.::.--.x:.........x...-------..:...x...:...:........x::..:....x....:-.x.:......::.:......x....x.:x..:.:.....x...x....:....:..:.:x......xx:...-....x:.x:.....x.x...x.:....:xx......--..:..xxx.....:.:.-.:xx:...:..x...:....:x..x.x... 11M2I16M7D39M1D72M1D36M2I17M1D30M 156/221 70.6% 225/94230402 0.0% 14/221 6.3% 115681189 74533366 +14567 chr4 + 190214555 149438511 149438510 149438959 449 TGTCAGTGTTCAGTTAAAGCACTTTATGTTGCATTCATTTTGATTTGAAATAA-GTGA-TGTCATACTTTTTTGTCATGCCATTTTTATCTAA----GTTTATTTCTGTTCATTAGT--AATATTTAAAAACGAGGATACAAAGTTATCAATATGAAAAATTACGTACTTCTTGAGCAAGGAAATGTGAATCCAA----AGCAGCCCCATTCTTAAATTAATGAAACTTTCTTACGTTTAG---TTTCTTTTAAGCTGAAAGAT-CATTCTTAAAGATCATTGATGAAGGAAAAT---ATTAAGATTCAAAACCAAGGGACAAAATGGTTAAGAAGACAGTT-AAATGATATGCCAATAAATAATATGATTTGTAAAAATAAATGCTAGGACCACCTATCTC--ATATTACAATGAAATACCAACATTACTTAAC-TTAAACAAGAGTGAAAATGTTCTCTAACCCTTGACT chr4 + 94230402 33729638 33729637 33730109 33729638 33729637 33730109 472 TGTTACAGTTCAATAAAATCACTTTGTGTTACATTCGTTTCCATATAAAATAAAGTGAATGTCACATTTTTTTGTCATACCATTTTTATTTAACACCTTTTTTCTATATCCATTAGTTTAAAAAGTTATAACAAGGCAAATCATTTATCAAAATGAAAAATGCTGTACTCCTTGAGCAAGGAAAAGGGAATCTAAATAGAATGTCCCCGCTCTTAAATTAATGGAACTGTTTTACATTTAATATTTTCTCTTAAGGAGTTATGTATGCACTCCAAGATCATTAATGAAGAAGTATAGAATCACAGTTTACAGTTGAAGGGCAAAACTGCTAAAAAAGCATTTCAGATGTCATGTCATCAAGTGATACAATGTAGAAAAATAAATGCAAGGATCATTGATCTCTGATATCATAATTAAACATCCAGAACTCATGACAAGGAGAAAGGATAGTAAAGTTCATTATAACTTGACT ...:.xx.....:.x...x......:....:.....:...:x..x.:......-....-.....:.:...........:..........:...----x...x.:.x.:.:.......--..x.xx.x.x...:...xx.xxx.x.......x.........xx:.....:..............x.x.....:..----.:::x....::.............:....x.:....:....:---.....:.....xx.xx.x:.-:::x..:x.........:......:.:x..---..:.x::..:.x.::::.:..:.....:x.:...:..::..x..-.:...x:...:..x:..:.:...::..x.:x............x....:..::x.....--....:.:...x...:.:.x.x.x:x.x.:..-xx:.:x...::.::x..x....x:..xxx....... 53M1I4M1I34M4I20M2I76M4I42M3I20M1I30M3I44M1I59M2I31M1I36M 313/449 69.7% 472/94230402 0.0% 23/449 5.1% 115708873 74505682 +3053 chr4 + 190214555 149454137 149454136 149454188 52 AAGAAAATGTGA-TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409069 4409068 4409121 4409069 4409068 4409121 53 AAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ....:.x..x.:-.:..:.......................x.x......... 12M1I40M 44/52 84.6% 53/94230402 0.0% 1/52 1.9% 145045068 45169487 +3085 chr4 + 190214555 149454160 149454159 149454210 51 ATATATATACACACACACACACACACACACACACACATATAAACACATACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:........::::.....x.x..x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 103313304 86901251 +16710 chr4 + 190214555 149463177 149463176 149463642 466 GAAAATCTGAACCTGATTTGTCAAGTCGTGAAGACAAATGATGATCAAACAGAGCACTTTAAAATGAACTGCCATAAACAAGAAGAGTGCAGCTTACTGCTGCTATTA--ACCATAATTGGGTTTTGGAAGGAAACAGAAGCCGAATGCAATATAGGTAATTAAAGAACAAGCTTTCGTTAACACTAGCAATCAAGGGGTTGTGATTTTAGAGACGTTGAATGTATTATGGTGCCCTG---AAACTCATCTATTTTTAAATGGGTAGTGTGTTTCTCTCTCCTGCAACACTAAAGTATAATCCTAGCTAACAGACAGGTCGTTTTCTATTCAAACTATTTACCTTCCATTTAGGGCAAAGATGAGTCTTTTCAAAATTCAGAATTACCATGGAAACCATATTCTGAATCCCTGAGGAATG-GGGAACAATTGGTTATGAAATTGTGATGGCTAAATTAAAAGTCCCTAAATA chr4 + 94230402 33735416 33735415 33735869 33735416 33735415 33735869 454 GATACTCTGAACCTTGAACATTTAGTCAAAAAGACCAATGACATCCAATCAAACTTCTTTAAAATGAATTGCAACAAACAATGGCAGCACAGCT-------GCTATTAGAATTATAATTGAGTTTAGGAGGGAAACAGCAGCTGAATGCAATGCAGATAATTAAGGAGCAAGCTTTTGTTAACACTATCAGT---AGGGTCATGATTCTGCAGATTGTGAACTTATTATG----TCTGAACAAACTAATCTATTTTTATAACAGAGGTATATTTCTGCTTTTTATACCAATAAAGTAT-ATTCTGGCTACAAGATAGCTGATCACTTATTTATTTCAAGTAC---CCATTTAGAGAAATGGTAAGCATTTATAAAATCTAAGATTACCATGGAAACCTTATTCTTTAATGCTGAGGATTATGGGAACAAATGATTGTACAATTGGGATGAGTAAATAACAAACCTCTGAGTA ..x.x.........x:xx::.:x....:x:.....x.....::x:...x..:.x:x............:...x.:......x::x..::.....-------.......--.::.......:....x...:........x...:.........::..:.......:..:........:..........x..:.---:....::.....:.:x...:xx....:x.......----:...---.....x...........x.xx:.x:..:.:.....x::.::.::.x..x........-..:..:....xx...:..x.x:.:x::....:.xx::.xx...---........:.x..x.:.:..:x...x:.....::.::...............x......xx.x:x.......x.:-........x..:..:.:x.....x....:x.....x.x..::.:..:.:.. 94M7D7M2I82M3D35M4D4M3I57M1D43M3D75M1I51M 316/448 70.5% 454/94230402 0.0% 24/448 5.4% 115727761 74486794 +3198 chr4 + 190214555 149483220 149483219 149483303 84 CTTTTTGTTTCATTGATCTTTTGTATTGTTTTCTTCATTTCAAATTCATTTATTTCTGCTCTGACCATCATTATTTCTTTTCTT chr4 + 94230402 7526230 7526229 7526313 7526230 7526229 7526313 84 CCTTTGGTTTCTTTGCTCTTTTGTTTTGTTTTACAAATCCTTATTTAATTTATCCCTGCTTTGGAAATTCTAATTTCTGTTATT .:...x.....x...x........x.......x:xx..:::x.x..x......::.....:..:xx..:x.x......x..x.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 141956990 48257565 +3897 chr4 + 190214555 149486615 149486614 149486688 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x.............:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 73453411 NA +27275 chr4 + 190214555 149489215 149489214 149489688 474 GTTGGAGGGCTTCAACTGCATTTTTTTAAAATTTC-------GAACTAAACACAAAATGTCCAGCATAGTCTTCTCAGCAAGTACATTATTTGTTGGAAGACAGAATGCTGTTTTAATGCAT---TCTGATTCCTTATTTTGTTACATAATAATTTGCTTAAAAAGCAACACATTGTGAGCTTGGGAGCTGTTAGGCTTTTATTTACCATGGTAGGTTAATCTCATTCAGTGAGGTATAGAAACTCAATAATGAGTGCTACAGTATATAAGCTAATTGCTAGGATAAAACCAAATGAATAATTACTTAACTCCAGAATGAGGCCTGTGGGAATTTTTCTTTAATAAAGGTTTAATTCACCAGTGATAATGAATGCAATCTCACATACTACTGAATAACACCATTAGCATAATGGCTGTGATACAAAAACTATAATTAGAACTAAACAGAAACGTTAATTACAGCCACCAAGGTACTGAATGAAA chr4 + 94230402 33740341 33740340 33740809 33740341 33740340 33740809 469 GTTGTAGAGCTTCA--TAAACTTGTTTGTTATTACTTTTGCTGCACAGAGCCCCAAATGTCCAGCACAAT-TTCTTTCTGACTGTATTGTCTGCTAGCAACTAGAAATCTCTTTTACTGAATGGGTCTTATT--TTTTTCCTCTATATAATAATGTGCTTAAAA-------CAATATG---CTGGGAGCTGTTAGGCATTTATTTACCGTGGTGGGTTAATCTCATCTAGGGAGGTATAGAAACTCAATCATGAGTGCTACAGTATATAAGCTAATTGCCAGGATAAAACCAAATGAATAATTACTTAACTTCAGAATGAGGCCTGGGGGAATTTTTCTTTAATAAAGGTTTAATTCACCAGTGATAATGAATGCAATCTCACATACTACTGAACAACACCATTAGCATAATGGCTAAGATACAAAAAGCATAATTAGACCTAAACAGAAGCGTTAATTACAGCCATGAAGCTACCAAACAAAA ....x..:......--.:x.:..x...:xx...x.-------.x..x:.:.x.x............:.:.-....:xx::.x.::...:.:..:.:.x.:x:....xx..x.....x..x..---...x...--..x..::x:..:........x.........-------..x.:..---:...............x..........:....:............::..x..................x.............................:...............................:..............x...................................................................:.....................:x..........x:.........x..........:...............:x...x...::..::... 14M2D19M7I28M1D51M3I7M2D30M7D7M3D303M 385/459 83.9% 469/94230402 0.0% 25/459 5.4% 115748874 74465681 +14814 chr4 + 190214555 149499457 149499456 149499736 280 TTTGGAAAGATACTGAACCTATATT----GGATAATAAAATATATTATAAAACCAGAAAGACACAGCAATATTTAAAATCTAGCTGATTTCCCTTTGGAGGCAGATGACTAACAGCTTACCTCAGCGAAGCAAAAATTGCTACAATAGTTTTTTTAATAGAAATGGTCCTTATTTATCATCTAAGATAACACCTATATACCTTATAGGCAAGAAATGAAAGATCTTAAAGA-CATTATGAAAAAAATCCAAACCTTATA-TTACAGTAATGTGATACTAATTAAAG chr4 + 94230402 33746161 33746160 33746446 33746161 33746160 33746446 286 TTTGGAAATAGACTGAACATGTATTTATTGACTAATCAAAAATACAGTAAAAGTAGAAAGACACAGCAATATTTAAAATCTAGCTGATTACCCTTTGGTGGCAGATGACTAACAGCTTACCTCAGCAAAGCAAAAATTGCTGCCAAAGGTTTCTTCATAGAAATAATCCTTATTTATTATCCAAGTTCACAGCTGTATACACTGCAGGCAGTAACTAAAATCACTTAAAAAGCACGATGCTAAAAAACTAAACCCCAAGCTTACGTGACTGTGATGCTTATTAAAG ........x.x.......x.:....----.:x....x...x...:x:.....x:...................................x........x...........................:..............:.x.x..x...:..x........::...........:...:...x.x...x..:.....x:.::.....:x..x.:...xxx......:.-..:x...xx.....x.:.....::.x:-....:xx.x......:..x....... 25M4I202M1I27M1I26M 222/280 79.3% 286/94230402 0.0% 6/280 2.1% 115753296 74461259 +3523 chr4 + 190214555 149502125 149502124 149502230 106 AATAATTTTTTATAA-TTATATATATATACACACACACACACACACACATA--TATATGTATG----------TATGTACTTTTCCCTAAGTACCTTATTATTGAGAACAAAAGTAAAA chr4 + 94230402 89823915 89823914 89824026 89823915 89823914 89824026 112 AGTAACTTTTTCTGACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCCC-----ATGAGA--AAAAATAAAA .:...:.....x.:.-........:x....................x:...--.....:..:.----------...:.:...:.x...x.:.x..:-----x.....--....:..... 15M1I35M2I10M10I23M5D6M2D10M 79/99 79.8% 112/94230402 0.0% 20/99 20.2% 59678210 NA +3130 chr4 + 190214555 149502143 149502142 149502194 52 TATATATATACACACACACACACACACACATATATATGTATGTATGTACTTT chr4 + 94230402 89823932 89823931 89823983 89823932 89823931 89823983 52 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCT .......:x.:..................x....xx.:...:..:...:.:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 59678211 NA +3091 chr4 + 190214555 149503097 149503096 149503163 67 TATAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGGACTGCTTGAGCCCAGAAGTTCGAGGTTACAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:.:.:.........::........x.xx.x.:.x::.....:........:.:x:..:.::.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 73469886 NA +26315 chr4 + 190214555 149513379 149513378 149513951 573 ATATACA----AAACTAATATTCCCTTATAAATAGTAAATGTTAAATGAAAAAAA--AGAAAAGAAGGACCACATTTATCCATTTAGTTGTAATAAATAATGCAAGCTTTCCAAATGGAAGTACTAGAATAATTAAGCTAATTTTCCAAAATTATTCTAGTGTATTCAATTATGGATTTTAATTATTTTAGAGAAGCAACTCATAGTGTTAATGAAAGAGACAGAAGTAAAAATCATGGTGGAGT-TAGGTTTCATGTTTCTGCATTCTATAAGCTTTATTAGACAATGTTAATCAAATATTTAATGAATACTAAGAGCCTTTTGGGAGAGTAAAATGAATGTTACCATCATGGCTCTGAGAACTAGGTTGAAGTATAATCACAATCAGTTAAGGTAAGTGGATTTCACTGCCAAAGGGAACATTGGTTGTTGAAAAGAGGTCTCTGGAGAATTGTTTGGTATTAAA----AAGAAATAATGCTAAAATAAAAA-----TTAAAGCATGCCAAGTTTATGACATAAACTCCTAGATACCAGAAATATTAGGAT---AATGTTGCTCTTCAATCTTCAACTCATAATAGTCAA chr4 + 94230402 33749047 33749046 33749625 33749047 33749046 33749625 579 ATATGCATTTCAAATTTATATGCTTTCTTAAAAAATGGTTATAAACAAAAGGACACTAGGAGAGCAAATTCATATTTGCTTATTATGTTATTCTAAATGATGTGATCTTTCCAAATAGAAGCAATGGAATAATTAAACTAATTTTCCAAAATTATTCTAGTATATTCAATTACAGATTTTAATTATTTTGGAGAAATAGTTCA--GTGTTAATGAAAGACACGGTAGTTAGAAACATGGCAAAGTATGGGTTTCATGTTTCTGCATTCCATAAAACTTATTAGAAAATGTAAATCAAATATTTGATGAATACTAAGAGCCTATTGGGACATTAAAATGAATATTACTGTTGTGACTCTGAGAGTCAGGTTGAAGTATAACAGAAGTCAGTTAAGGTAAGTGGATTTCAGTGCCAAAGGGAACATTAGCTGTTTTAAAGAGGCCTCTGGAGTATTATCCAGCATTAAATATGGAGGAAAAAAAATAAATGAAAAAGGTTTTTAAATAACACTCAGTCTGTGGCACAAACCA------ACAAAAGATAGCAGAATTTCAAAGT-----TTCAGCTGTTACCTCATATAAGTTAA ....:..----...:.x....x.::.:x....x.:.::x.:.x..xx:..::.x.--..:.:..x.::x:..:....::::...xx...:.xx.....:...::.x..........:....:.x.:..........:........................:..........::...............:.....::.::...--..............x..:.x...x.:..x.....:::...-.:....................:....:x:........x.....x............:.................x......x.x..........:....::.::..:........:::..............:x:x.:.......................x................:.:....xx.......:........x...:.:::.:......----:..:..x..x:x....xx.....-----.....xx.::.:x...:.:..:..:....:x------..x.:.:...x:..:..---..x..-----....:::x.:.x......xx...:.. 7M4I44M2I146M2D40M1I221M4I23M5I31M6D17M3I5M5D26M 423/560 75.5% 579/94230402 0.0% 32/560 5.7% 115764332 74450223 +3101 chr4 + 190214555 149530767 149530766 149530821 55 ACCTGCATACTCAGACACAGACACCCCCACCCCCCCACCCCCCCCCCACATACAC chr4 + 94230402 65299718 65299717 65299771 65299718 65299717 65299771 54 ACATGTTTACTT-GACACAAACACCCCCTCCCCTCCCCCCCCCCCACACACACAC ..x..:x....:-......:........x....:..x........x....:.... 12M1D42M 44/54 81.5% 54/94230402 0.0% 1/54 1.9% 84231049 NA +3225 chr4 + 190214555 149544950 149544949 149545053 104 AAACAGGGGAAAAACACTGTGAAGGC-------AATCTTGGCTATGGTTTTTTTTAGTATGACCCCAAAAGCACAGGTGACAGAAGCAAAAACAAACAAACAAACAAAAAA chr4 + 94230402 73195700 73195699 73195806 73195700 73195699 73195806 107 AAATACGGAAAAGTCATTTTGAATGTTAAAATGCATGTCAGCTGTATTTATTTAAAAAAAAGC----AAAACACAAATGACAACTGCAAAAACAAACAAACAAACAAAAAA ...:.x..:...:x..:.x....x.:-------x..x.::...:.:x..x...xx.:x.x::.----...:....::.....:xx.......................... 26M7I30M4D44M 70/100 70.0% 107/94230402 0.0% 11/100 11.0% 76349250 NA +3096 chr4 + 190214555 149549378 149549377 149549447 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 73516181 NA +3577 chr4 + 190214555 149566476 149566475 149566587 112 AAAAGTTTGTGTGTGTGTGTGCGTGTGTGTACACATGTACGAGAGAGAGAGAGAGAGAGAAAAGTGACAAAGAAAGAG------AGACACAGACAACAGAGGCAGAGAGAGAATTGAA chr4 + 94230402 62123646 62123645 62123763 62123646 62123645 62123763 118 AGAAGGTTGTTTGTGCGTGTGTGTGTGTGTGCACATGAAAAGTGGGGAGGGAAGGAAAACAAGATGTAAGAGGGAAAACGTTGCAGGCACACACAAGAGCTACAGCAATGAAAGTAAA .:...x....x....:.....:........:......x.x::x:.:...:..::..:.:x..::..xx.:..::.:.:------..:....x....x..xx:...x:.x::..x.:.. 78M6I34M 71/112 63.4% 118/94230402 0.0% 6/112 5.4% 87442830 NA +15589 chr4 + 190214555 149574651 149574650 149574996 346 ACATTTGAACAGGGAATTTCCTTTCAACTGCTAATGCTTATATGATAATATATATTAAACACTAAATCAGTTTTAGAGTTTGGTTCAGATATTGCTACTAATTAGTTTTGGCTGATATTGAAGTATTTTGTATGCTCCATTTATAAAAGCACTATTTGCCCATCTGTTCATAGGTTGAAAGTGATT-AAGGATACTTATTTCGGCTGTTGTAAAAGCCAAATACTTCTTAAGCTGCAAATATGTGACAAAACCAGATCAGG--TTGCCAAGTTCAGAAAT--ATAGTAAAAGAGATCTGTGATGCCTCCCTCCCCCAATTC-----------CTCTTCCAACCTGCATTATTGAAAAGTAAA chr4 + 94230402 33769234 33769233 33769586 33769234 33769233 33769586 353 ATGTTTGAAGAGG-AATTTATATCAAACCATCAGTTTCTCTACATTAATATATATT------TCCATCACTTATAAATTGCAGTTCAGATATTGCTACTAATTAGTTTTGGCTGATACTGGAGTATTTTGTATGCCCCATTTATAAAAG--CTGTTTGCCCATCTGTTAATAGGTTGGAAGTGATTAAAGGACACTTATTTTGGCTGTTGCAAAGGCCAAATCATTTTAAAGCTGCAAATATGTGACAAAATCAGCTAAAGGTTTGCCAAGTTCAGGACCTGATTTTCCTAAAGATTTGTGGTGTCTGCTTCTTCCCCCTCCTGCTTGAAGTCTCTTTGAGTCTTCAGTATACAAATATAAA .::......x...-.....x:x.:x...::::.:.x::.x..::x...........------.xx....x..x..:.x.x::...................................:..:..............:.............--..:..............x........:........-.....:........:........:...:.......xx..:.x......................:...x.x.:.--.............:.x:--..xx.xxx.:....:....:..:..x.:..::..xx:..-----------.....:x.::..x..x...xx...x:.... 13M1D42M6D87M2D35M1I74M2I17M2I39M11I30M 261/337 77.4% 353/94230402 0.0% 25/337 7.4% 115805417 74409138 +3163 chr4 + 190214555 149590230 149590229 149590279 50 TTTTTTCTTTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTGCTTTCCTTT chr4 + 94230402 68974690 68974689 68974739 68974690 68974689 68974739 50 TTTTCTGTTCTTCAGTCCCTTTTTTTTTTTTTTTTTTTGTGCCTTCCTCT ....:.x..:...xx...:...................x...:.....:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 80615540 NA +3122 chr4 + 190214555 149602041 149602040 149602113 73 AAAAAAAAAAAAAAAGAAAAAATATGCTTTTTACTAAACAACGAGAAATTAGAATACATCAATAAAAATATAC chr4 + 94230402 42898512 42898511 42898584 42898512 42898511 42898584 73 AAAAAAAAAAAAAAAGGAAAAAAGTGCTTTCAAAGAATGATCTATAATGCATAATGCATCAGAAAAGATATAC ................:.....x:......:x.xx..xx.x.x.x..xx:.x...:.....:x...:...... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 106703529 83511026 +3033 chr4 + 190214555 149623719 149623718 149623765 47 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACATGTGCACA chr4 + 94230402 79265521 79265520 79265567 79265521 79265520 79265567 47 GTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACA ...........::........xx...:.:.:::.....:........ 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 70358198 NA +8427 chr4 + 190214555 149642018 149642017 149642483 466 CAGTGTGTATACTCAAGAAGAAATAGTCCAGACAGTGAACGAGGGGGAAAAGAATCAGAAAATGCTTGCACGGAGAGTTGCTTTATAGGGCTGATAGTTTAACTAATTAATATGACATTTAATAAATGGCACTTTGAAGAACTGCTAA----GCTTCAGTAAACTTTCAAGCCAAACCAACTTTGCTTATTATTTTAAAACAATAGAATTATAGTATATTTTGC-CAGCATAATTTTACTACCTCATGTTTAAAAGATT--------------------CATATATATGAAATGCTTGAAAGAAACATTGCATATATATAGCCACTGTATTTCCCA-----GTGGACACAGCTTAGCACAAACTGATAAAAATGAGAGGTCGTAAAATAAATCTATTTTCATACCCATTGGTGTGTAATTGAATAGATTCTTCGAATAGTTGCTATAAATTAATTCCAACTTTAAGGCAATGAAATATTTTACCTCTTGCAAAGTA chr4 + 94230402 33787042 33787041 33787494 33787042 33787041 33787494 453 CAATTTGTTTACCAGAAACGTACCAG-ACAGACTGTAAATAAAAAGGAAAAGCTTCTGCAAGTGC-----CGAAAGTCTGCTTTTCATAGCTGATATTACAAATAATTAGCTTGGCATTTATTAAATGACATTTCTAAGAACTGCTAAAGCTGATTTAACAAGTGAAAAGAACAACCCTATTTTGTTTAGAA----AAGGTAGTTGCATTGCTGCACACTTTATGCAAAATATTTTTGCCAATTCAGGTTGAAAACATCATTTCTGGAAATAAATAACACTTGAATAATAAGCACTTGAAATAAACATCCCCTCTATA----CACTGAACTTTCTATAATTGTGCTCTCTGCTTCACAAAAACTGATAAA------ATGTGGTAAAGCTGAT--------ATACAC-------TGCAACTGAGTGGGTTCATGATAAAGTTATAACAAATTTACTCTTACTTAAAG--------ATGTGTTACTTTTTTCAAAGTA ..:.x...x...:x:.:.x.x.x:..-x.....x..:..::.:::.......xx..x.x..:...-----..:.::x:......x:.x:.......x.x:..x......::x..:......x......:..:..:x............----.x..:.::..::xxxx.::x...x..x.:....:...xx.----..:::.:.x.x...::x.:.:.:...::-..:x...x....:.:.x:...x...x....x..:--------------------.x.:x...xx..:::.......x......:x.x.x....----.....x.:..:.:.-----...xx.x.x....x:..x...........------.x..x.....::x:..--------....x.-------..:..:...:.:.:...x.x:x.x....::x.:.....x.:..:x....x...--------..:.x....:.:..x....... 26M1D38M5D78M4I40M4D28M1I34M20I39M4D14M5I29M6D16M8D6M7D53M8D22M 278/423 65.7% 453/94230402 0.0% 73/423 17.3% 115854976 74359579 +3043 chr4 + 190214555 149657852 149657851 149657999 148 ACTAGATTTTTTTGCTGTTAAATTTCTTATATATTCTGGATACTAAC-TCCTTGTCAGATAT---ATAGTTTGCAAATACTTTCTCCCATTCTGTAGGTT--GTCTCTTTATGCTATTATTTTGTTTGTTTTGGATTTTTTGTTTTGTTTTGCT chr4 + 94230402 37200437 37200436 37200583 37200437 37200436 37200583 147 ACTTGATTTTCTTGAAGAT-------TTTCAAGTTTTGGAGGCTAGCAGACTTGTAAAACAAGCAACAGCTTAAAATCTCTTTGTTGTTTTTTATTTTTTTAATTTCTACATGTTGATTTTTTGTTGGTTTTGGGTTTCTTGTTTTGTTTTGTT ...x......:...xx.x.-------..x:.x:..:....x:...:.-xx.....x.:.:.x---.:..:..:x..x:x....x.:x:x..:.:.xxx..--:.:...x:...:.:x.x.......x.......:...:.............:. 19M7D21M1I14M3I35M2I52M 93/141 66.0% 147/94230402 0.0% 13/141 9.2% 112457415 77757140 +3468 chr4 + 190214555 149668610 149668609 149668709 100 TAACAAACCTGCACATTCTGCACGTTTCCCA-GAACTTAAAGTATAAT------AATTAAATA---AAAGAAAATGTGAATTATTATAAGTAAATGCTGAAGTAAAATTA chr4 + 94230402 60529693 60529692 60529802 60529693 60529692 60529802 110 TATCAAACAATAATATTTTAAACAAATCCCAAGAATTCAACATATAAACTTTTAAAATAAATAGCAAAAGAAAATATGAATTATTATGAATAAATAATGAAATGAAATCA ..x.....xxxx.:...:.:x..:xx.....-...:.:..x:.....x------..x......---.........:...........:.:.....:x....:.:....:. 31M1I16M6I9M3I44M 74/100 74.0% 110/94230402 0.0% 10/100 10.0% 89138917 NA +6382 chr4 + 190214555 149701589 149701588 149701814 226 TGCAATGTGTCTCACACGCTCTGGCACTTCCATTTCATACTTCACAGTTTTAGTGTCACTTTGAGGTTTGAAATGTTTCACAGTTATTTGCTATATGTGGGTGCCAAAAAAATCAGCCTATATCACTAAAAAAGATACTACAAGAATAGAAAATGGTTAGAGT-----CAGATGGGAATTTTTGTTTCATTAACATT-CAGAACTTTATCAAGAATCACTTTACTTTTTATC chr4 + 94230402 33800516 33800515 33800739 33800516 33800515 33800739 224 TGCAACATCTTTCTCACATTTTGACACTTGCATTTCATACTTCACAGTTTTATTAGCGCTTTGAGCTTTGAAAGATAGCTCATTTATTCGCTATACCTAGATGCCACAAAACTTTGAATACACTAT--ATAAAGATAT----AGAAGAAGATATTGATGGAGTTCCACCAGAAGCAGATAATTACCTTGATAGGATTCCAGAAACTGATCTGGCATAA--TTGCTGTTTGTC .....::.x.:..x...::.:..:.....x......................x.:x.:.......x.......x:.xx.x..x.....:......:x.:.:.....x....x.:x.xx..:.::.:--.x.......:----....x.::.x..x.x.:....-----....x.x::..xx..:::.::x..:x...-.....x:.x...x:.x..x.--..:..x...:.. 126M2D10M4D21M5I29M1I20M2D12M 149/218 68.3% 224/94230402 0.0% 14/218 6.4% 115901073 74313482 +3137 chr4 + 190214555 149724455 149724454 149724501 47 ATAAACACTCTCTCTTTCTCTCTCTCTCTGACACACATACACGTACA chr4 + 94230402 75248042 75248041 75248088 75248042 75248041 75248088 47 ATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .....:x..::....:.............x.......:....::... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 74476413 NA +3201 chr4 + 190214555 149757722 149757721 149757779 58 TATATTCCTGATATTATATATGTGTGTGTGTGTGTGTGTGTGTGTATATTTCTGCAGA chr4 + 94230402 27325504 27325503 27325561 27325504 27325503 27325561 58 TATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAA ....:x.....xx...x..............:.........::...:..x.x..x.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 122432218 67782337 +3139 chr4 + 190214555 149773223 149773222 149773312 90 GCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAAAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x..................::........x.xx.x:..xx:.x.......:.:..x:xx:.x:..:..------..x...:..... 72M6D12M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% 73740017 NA +16504 chr4 + 190214555 149791992 149791991 149792359 368 ACCAGAGACTAAACTGATGCAAATAGGATGGCAAGCAAAACT-CAGCTTTCTGCCAAAAGCTTTCCCCAAGAGGTGAATAACATTTTCCATAAGTCTATGGAAATTGCAAAACTG-GTTTGCTAAGGAAATACTCTTTGCCACTTTTTAATGTATGATTTAACATTTCTGTTCTCTACTGAATAGTATAGGTTATATTAATTACATCAGAGGGGAGCCCATATTTA-TATTCAACGAAAAGATTAACAGC------------ATTTTAATTCACTAGAGAAAATTTTACCATATGT---AAAAATGAAATATG--CATTTTTAACTACTTTTGCTAGTGTAAGAACTATTTA------TACAGTGTAATTCTGCAAGATTAAAATGAAATATAA chr4 + 94230402 33830800 33830799 33831191 33830800 33830799 33831191 392 ACCAGAGATTCAAGCAATTCAAAATATATGCCAAGCAAAACTACATTTCACTGCCAAAAGCTTTCCCCAAGAGGTGAATAACATTTTCCATAAGTCTGTGGAAATGATTGAATTAAGTTTGGTAATGGAATACTCATAGCTACTTTCTA-TGTATGATTCAACATTTCATTTCTCTACTGAATTATATGGATTGCATTAATTACATAAAAGGGAAGCTCATATTTATTATTCAATGAAAAGATTAACAGCCTAAAATACAGTATTTTAATACACTAAGGAATATTTATCTCGATGTTTAAAGCATGAAATTTGGTTATCTTAACGTACTTTTCATCCTGGAAG-ATTATTTATATTGTTACAGTTTAATTTCACGGAATTTCAATTACATATAA ........:.x..x::..x....xx:x...x...........-..x:.:x...............................................:.......x::x:..:.:-.....x...x.:.......x.x..:.....:..-.........:........xx.............x:...:.:..::...........x.:....:...:........-.......:...............------------........x.....::...x....xx.:xx....---..:x.......x..--:..:..x.xx.......xx.xx..x...-.:......------......x.....:::.:::...xx...x.x...... 42M1I72M1I33M1D76M1I23M12I34M3I14M2I28M1D8M6I36M 288/366 78.7% 392/94230402 0.0% 28/366 7.7% 115961192 74253363 +3063 chr4 + 190214555 149799824 149799823 149799879 56 AAGCTGTAATAAAAAGTCTACCAGTAAAAAAACAAAAAAACAAAAAAACAAAAAAA chr4 + 94230402 30796805 30796804 30796860 30796805 30796804 30796860 56 AAAATGTAAAAGGAAACTTACTACTATAAAAACAGAAAAATAAAGAAACAAAAAAA ..:x.....x.::..:::...:.x..x.......:.....:...:........... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 119003019 71211536 +3207 chr4 + 190214555 149812454 149812453 149812496 43 TAGATCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601297 12601296 12601339 12601297 12601296 12601339 43 TAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:.x.x...................x.....:.......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 137211157 53003398 +3513 chr4 + 190214555 149812454 149812453 149812504 51 TAGATCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAGA chr4 + 94230402 75248043 75248042 75248092 75248043 75248042 75248092 50 TAAATCCTTC-CTCTCTCTCTCTCTCTCTCACACACACACACACACagaga ..:...::..-.................x..................x... 10M1D40M 45/50 90.0% 50/94230402 0.0% 1/50 2.0% 74564411 NA +3342 chr4 + 190214555 149812458 149812457 149812504 47 TCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAGA chr4 + 94230402 75248050 75248049 75248096 75248050 75248049 75248096 47 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagaga .::...................x................x.x.x... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 74564408 NA +3690 chr4 + 190214555 149812459 149812458 149812504 46 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAGA chr4 + 94230402 75248049 75248048 75248094 75248049 75248048 75248094 46 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagaga ..::....................................x.x... 46M 42/46 91.3% 46/94230402 0.0% 0/46 0.0% 74564410 NA +3330 chr4 + 190214555 149812463 149812462 149812504 42 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACAGA chr4 + 94230402 75248049 75248048 75248090 75248049 75248048 75248090 42 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACaga ..::...............x.x.................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 74564414 NA +3316 chr4 + 190214555 149812463 149812462 149812498 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 137211159 53003396 +14840 chr4 + 190214555 149820238 149820237 149820570 333 TAAAAACTATACAGTGTCAAAATAGAAATATCAGAAACCAAAGTTCTCTGATCAGACGCTTTCTATGAAATATGAAATAGCTAAACCAACTCTAAGCTGTGCCTCAAATTTATATGCTTCCAAGCTATTCAAATATAAAACAAGCACTAACAAATGCGCAACCTTGTCCATCGCAAGGCTAATAAATCAAAATCACCAAGGTAAGTTAACTGCATTTTCAGTGGGTGCAGATTTATCATCAGAGGCATGATAATCATGCAACCACTAGAAAAAG--CAATGTGTTTTCCATGGCCTTGGTCATAATTCACCAACAACACTGACTTGTAACGTTTC chr4 + 94230402 33833588 33833587 33833915 33833588 33833587 33833915 328 TAAAAAGTGAACAGTATTGAAA--AAAATATCAAGAGCAGCACTCTTCTGGTCCAGTTTTCTCCATGAAATATGGAACAGCTAAA--GTCTTCAAGCAATCCCTCAAATTTATGTGCTGA-AAGCTATTCAAATATAAAATAAGCACTAACAAACAGGCAACCTTGTCAGTTGCAATGTTAATAAATCAAACTCACCGAGGTAAGTTAGCTATATTTTCAGTACAAGTGGATATATCATAAGA-GCCTGATAATGATACAACTAGCAGAAAAAAACAAATGTGTATTCTCTGACCTTGACAATAATTCACTAACAGC-TTGCCTCACAATTTTCC ......x.:x.....:.::...--:........::.:.x:x.x.::....:..x:::x:.:..:..........:..:.......--:x..::....x:.x............:....xx-...................:.............::x...........x:.:....x.:............x.....:..........:..::.........:x:x.::...x......x...-..x.......x..:....:.x:.......:--x.......x...:x..:.....::x.........:....:.-:..x..:::..:x..:. 22M2D61M2D33M1D122M1D30M2I41M1D17M 242/326 74.2% 328/94230402 0.0% 9/326 2.8% 115986650 74227905 +3081 chr4 + 190214555 149821389 149821388 149821439 51 TTGTTCTTATTGTTGTTTGTTTTATTTTTATTTTTTGGTTGTTTTGGTTTT chr4 + 94230402 63215019 63215018 63215069 63215019 63215018 63215069 51 TTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTTTTAGGATGATTTGGATTT .....:..:..............:....xx.....x..x..x.....x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 86606370 NA +3754 chr4 + 190214555 149837057 149837056 149837180 124 ATCAAAAAAAAGAAAGAAAGAGA----GAGAGAAGAGAGAGAGAGAGAGAGAGA----------GAGAGAGAGAAGAGAGAGAGAGAGAAAGAGAGAAGGAAAGGAAAGGAAAGAAAGAAAATAACTTGAAACTGTGA chr4 + 94230402 49044657 49044656 49044794 49044657 49044656 49044794 138 ATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGA ..:...:.:..:.:.:x......----.:.x.:xx...:...x.::x..x....----------....:..:......xx.:...:....::.::.x:::...x.....:..........x:x.:.xx:......x.. 23M4I27M10I74M 82/124 66.1% 138/94230402 0.0% 14/124 11.3% 100792400 89422155 +3801 chr4 + 190214555 149840995 149840994 149841173 179 AATAAAATGAAATATATATGTGTATATATATACACATACACACACACACACACACACACACACACACACACGATTAAAAAGAAAGAAGAGGTGATCTGCCTGAATAATGCTTACCAAGGAGACTT---TCTTCAAGGTAT----AGCCAAATATGTAAAGTTCTTAGAACAGTGTCTAGCATGTAC chr4 + 94230402 74671056 74671055 74671241 74671056 74671055 74671241 186 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACAACAAAGCAGAATTAAGATTTCAGGATATTTGAGGCTGAAATTGTAATGCTTGTGGGAAAATATACAGGATACAC ..x..x..:x..x.xx..xx............:.:.................x.x.x.x.:.xx:.x.x.x:........x:x......:.x:..xx.::x:.xx.:.xx:x..x...x...x..---x:....:.:...----:..::..xx.....x.:.:x.:.:.x.:.:.x:..x..::.. 125M3I12M4I42M 111/179 62.0% 186/94230402 0.0% 7/179 3.9% 75169939 NA +3266 chr4 + 190214555 149840998 149840997 149841126 129 AAAATGAAATATATATGTGTATATATATACACATACACACACACACACACACACACACACACACACACGATTAAAAAGAAAGAAGAGGTGATCTGCCTGAATA---ATGCTTACCAAGGAGACTTTCTTCAA chr4 + 94230402 23247708 23247707 23247824 23247708 23247707 23247824 117 AAGATGACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACAC--------AAGGAAAAAAG-------TTACATGAATAAATATATATATGAAATAGCCTACCTCCAA ..:....xx.:xx:......:...::.:......x:.::x...:.:::.......:..........--------..:....:...-------:.:.x......---..::x..:x..:x..x..x:..:... 66M8D11M7D11M3I26M 77/114 67.5% 117/94230402 0.0% 18/114 15.8% 126593290 63621265 +3009 chr4 + 190214555 149854215 149854214 149854284 70 AAAGTATAATAATAAAAAATAAATAAATAAATAAATAAAATTGAAATTAATACAAAAAAATTAAAAAAAA chr4 + 94230402 621654 621653 621723 621654 621653 621723 70 AAAGAAAAACAATCAAAAATAAATAAACTAATAAATAAAAACCCAACCAACCAAGCAAAAGAAAAAAAAA ....x.x..:...x.............:x...........x:xx..::..:xx.:x....xx........ 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 149232561 40981994 +3859 chr4 + 190214555 149860386 149860385 149860497 112 TATATATATATGTGTGTGTGTGTATATATATATGTATGTATATATATGTGTATGTGTATATATATATGTATGTGTATATATGTATGTTTATATATGTATGTGTATATATGTA chr4 + 94230402 21109194 21109193 21109299 21109194 21109193 21109299 106 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATA------TACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCA ....:..:.:...x.x....x.::...x........:x:.:...------..:x:..:..:x....:......::x:..::x.x...x.....:......x:...::...:. 44M6D62M 71/106 67.0% 106/94230402 0.0% 6/106 5.7% 128751192 61463363 +3230 chr4 + 190214555 149860388 149860387 149860532 145 TATATATATGTGTGTGTGTGTATATATATATGTATGTATATATATGTGTATGTGTATATATATATGTATGTGTATATATGTATGTTTATATATGTATGTGTATATATGTAAGTATACATATATGTATACTTTATATATGTATATA chr4 + 94230402 21109194 21109193 21109328 21109194 21109193 21109328 135 TATACATGTGTGTCTCTGTG----------GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....:..:.....x.x....----------x.::.:.x.....:.::x:.::.:..:x::.:..:x...::....:..:x:...:..x.:.:.:.........:x..:.:x:.::...::x:xx..:.x...x.:.:x..:..:. 20M10D115M 78/135 57.8% 135/94230402 0.0% 10/135 7.4% 128751194 61463361 +3059 chr4 + 190214555 149860389 149860388 149860442 54 ATATATATGTGTGTGTGTGTATATATATATGTATGTATATATATGTGTATGTGT chr4 + 94230402 37579520 37579519 37579573 37579520 37579519 37579573 54 ATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ................:........x..::::.:.:.....xx....:.x:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 112280869 77933686 +3360 chr4 + 190214555 149860395 149860394 149860467 73 ATGTGTGTGTGTGTATATATATATGTATGTATATATATGTGTATGTGTATATATATATGTATGTGTATATATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGT----GTATATACATTTGTATGCATCTGTATG ...x.:...:...::..x:.......x......:..::....----.......:..x......::.x.:.... 42M4D27M 52/69 75.4% 69/94230402 0.0% 4/69 5.8% 63226472 NA +3088 chr4 + 190214555 149860667 149860666 149860738 72 TATGTAAGTATACCTATGTGTATGTATATATATGTATGTGTGTATACATATATGTATGTGTGTGTATATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...:...::.:..x...:x..x.:...xx:.....::..:..........:.....:.:x.:.:.x:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 108111571 82102984 +3085 chr4 + 190214555 149860690 149860689 149860747 58 GTATATATATGTATGTGTGTATACA------TATATGTATGTGTGTGTATATATATATGTATGT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...........:......x......------:.:..........:.x.:.:.x.....:.x... 25M6I33M 47/58 81.0% 64/94230402 0.0% 6/58 10.3% 73151099 NA +3495 chr4 + 190214555 149872049 149872048 149872150 102 TATATATATGTGT----GTGTGTGTACCTGTGTGTATATATGTATATACATGTATGTGTATATGTGTATCTATGTACATGTGTGTATATATGTGTGTGTGTGTGTG chr4 + 94230402 21109194 21109193 21109297 21109194 21109193 21109297 104 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATG--CTTCTGTGTATATGTGTATGAATATGCATG ....:..:.....----...x.:...::.:.:....:x:.::....:x.:....:x.:..::.:....:::...--.x.x.........:...:..x:.:..::.. 13M4I57M2D30M 66/100 66.0% 104/94230402 0.0% 6/100 6.0% 128762855 61451700 +3710 chr4 + 190214555 149872051 149872050 149872156 106 TATATATGTGTGTGTGTGTACCTGTGTGTATATATGTATATACATGTATGTGTATATGTGTATCTATGTACATGTG----TGTATATATGTGTGTGTGTGTGTGTGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTG--GGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:........x.x...:--x.:..:.x........:x:....:..:x:..:..:x.:..:x.......x::..----...:.........:..x:.:..::..:.:. 20M2D54M4I30M 71/104 68.3% 108/94230402 0.0% 6/104 5.8% 128762857 61451698 +4109 chr4 + 190214555 149881061 149881060 149881206 146 AAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAGGAAA chr4 + 94230402 49044666 49044665 49044809 49044666 49044665 49044809 144 AAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAA--ATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAA ......:x....:.xx.::.:x:.xx.......x.::x..x:....:x.xx:.:x..:.:.::.....:xx..........:....:x::...--.x.:...:..:...:...x....x.:::..xx:..:xx..:....:..... 93M2D51M 89/144 61.8% 144/94230402 0.0% 2/144 1.4% 100836395 89378160 +3606 chr4 + 190214555 149881070 149881069 149881205 136 AGAAAGAAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAGGAA chr4 + 94230402 49044692 49044691 49044820 49044692 49044691 49044820 129 AGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAAAGGT-----GAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA .......x...x.:-..:.::x.xx...x:......---.:....:xx.............:.:x-----......x........:...:...x....x.:::..xx:..:xx:.:.:..:.....:x:..x.:x.. 14M1I21M3D26M5D67M 86/128 67.2% 129/94230402 0.0% 9/128 7.0% 100836378 89378177 +3756 chr4 + 190214555 149881121 149881120 149881260 140 AAAGAAGAAGGAAAGAAAGAAAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA-------AGGAAAGAAAGAAG--GAAAGAAGGAAG-GAAGGAAAGAAAGAAGGAAA-GAAAGAAAGAAAGGAAGAAAGAAAGA chr4 + 94230402 84536568 84536567 84536718 84536568 84536567 84536718 151 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAA ..:.:.:.:.........:...x..x...:.x......x:.:...::....:.::::.::......:.-------..x...:xx..x..--...:x.xxx...-...:..x.:.x......:.x-.::..:....:.xx.....:.x..:. 68M7I14M2I12M1I20M1I26M 93/140 66.4% 151/94230402 0.0% 11/140 7.9% 65344553 NA +5540 chr4 + 190214555 149881150 149881149 149881293 144 GAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAGGAAAGAAGGAA-------------GGAAGGAAAGAAAGAAGGAAA--GAAAGAAAGAAAGGAAGAAA--GAAAGAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAGGAA chr4 + 94230402 1500702 1500701 1500862 1500702 1500701 1500862 161 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaa .:...::.:...:.:x..::.....:.:x..:..:.:.:......:...x.:.:....:..:..-------------.:::....x:..:........--.:..:...:....:......--.:..:x::....::.:.....::..::...:.::..... 64M13I21M2I20M2I39M 97/144 67.4% 161/94230402 0.0% 17/144 11.8% 148380448 41834107 +3040 chr4 + 190214555 149881211 149881210 149881291 81 GAAGGAAGGAAAGAAAGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAGG chr4 + 94230402 86089084 86089083 86089164 86089084 86089083 86089164 81 GGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGG .:..:.:.....:.:x.x...:..:...:...:....:x..:::...x..:x......:::.:.x.:x:....x:.:.:.. 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 63792127 NA +3055 chr4 + 190214555 149881234 149881233 149881344 111 AGAAAGAAAGAAAGGAAGAAAGAAAGAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAGGAAAATTATAAGCCGTGTCAAGTTTACAATATTTTAGAAGAGAGTAGAGAAGAA chr4 + 94230402 61683536 61683535 61683632 61683536 61683535 61683632 97 AAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGA------------TGTCC--TTTATAGGAAGATATCAAGGAGTGGAGAAAAA .:....:......:x..:..:..x:x:....::........x..:.........:.x.:.------------....x--....:.:x.xxx..xx.::....:.....:.. 60M12D5M2D32M 67/97 69.1% 97/94230402 0.0% 14/97 14.4% 88197698 NA +3174 chr4 + 190214555 149895740 149895739 149895787 48 ATGGAGGCGCTATATATATATATATACACACACACACACACACACACA chr4 + 94230402 4409074 4409073 4409121 4409074 4409073 4409121 48 ATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ..x.....xx..:.............:.........x.x......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 145486666 44727889 +3039 chr4 + 190214555 149895843 149895842 149895890 48 ATATATACATATATAAATATATATATACACACATATATATACATATAT chr4 + 94230402 50629533 50629532 50629580 50629533 50629532 50629580 48 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACAT ........x...........:....:.....::..x...:...x.:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 99266310 90948245 +3191 chr4 + 190214555 149907597 149907596 149907670 74 TCTGATCTCAGTAGCTAAGCAGAGCTGGGCCTGGTTAGTACTTGGATGGG-AGAGTTTAGCTGAATTGCAAGGTG chr4 + 94230402 2289844 2289843 2289918 2289844 2289843 2289918 75 TCAGATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGAAGCATTCAAGGAAAACACAGGGTG ..x.......xx......x...:::......x...:...:..........-..x:..:.:xx:..x::..:.... 50M1I24M 53/74 71.6% 75/94230402 0.0% 1/74 1.4% 147617753 42596802 +3009 chr4 + 190214555 149936116 149936115 149936187 72 TCCTTCTTTTTTAAGGTTGAATAATATCACATTGTGTATATATATATACATACACACACACATATACATACA chr4 + 94230402 4409050 4409049 4409121 4409050 4409049 4409121 72 TTTTTGTTGTCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA .::..x..x.:...:.:.:..x.:xx.x.x::...::...........:...........x.x.:...:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 145527066 44687489 +3055 chr4 + 190214555 149936149 149936148 149936206 58 GTGTATATATATATACATACACACACACATATACATACACACATATATACCACAATTT chr4 + 94230402 68837101 68837100 68837158 68837101 68837100 68837158 58 GTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTATCAGAACTT ....:.:.:.:..:...:.x.:...:.....:....:.......x.x..:..x..:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 81099048 NA +7419 chr4 + 190214555 149949369 149949368 149949636 268 TCTGATTTTCACAACGTCTAGGGTCTCACTGACTTTTTACCTGGCACATTTACTGTACTGTTAGCTCTGGAGAACAGACTGCAAGGTTTACAATTT---ATGGGCAAATTTTCATATTATGGCACTTTCTCTCTCTTCACACACACGCACGTGCACACACACATGCTCACAAGCTTCTCACTTTTACTGTTGTCAGGCTGCTCACTTCTCATACCAGCTGCTCCTCCCGCCTGCTCCCTCCAAACATAATGTAA-AGCCTCCATCTGATGCA chr4 + 94230402 33858027 33858026 33858250 33858027 33858026 33858250 224 TCTGCTTCCAGTGAAGTCTAGAGTCTCCCAGACTTGTTACCTGGCACATGAGCTGTATCATCAGTTCTCATGAACAGATTGTGAAATTTGCAATTTCCTAGGAAAAAATTTT----GTACAGCATTCT-------------------------------------------ACCCTGATATTTTTTCTGTTGTCAGGCTGCTCACTTCTCATGCCAGCTGCTCCACCCACCTGTTCCC-CTGTGTATAACTTAATAATCTACATTTTATATA ....x..::x:::.x......:.....x.x.....x.............xx:.....:::.:..:...x:x.......:..::.::...:......---.x.::x.......----x..::...:.:.-------------------------------------------.x.:.xx:.:....x..........................:...........x...:....:....-.::x::....:x...-.::..x...:.x..::. 96M3I13M4D12M43D67M1D15M1I17M 157/220 71.4% 224/94230402 0.0% 52/220 23.6% 116091342 74123213 +3072 chr4 + 190214555 149959000 149958999 149959083 84 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTATATATATATATACGTACG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x.:...x.................:.xx:...:x.::.::x.:...:x:.:::...x...::.:.:...:..::.:. 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 64124467 NA +3225 chr4 + 190214555 149959002 149959001 149959084 83 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTATATATATATATACGTACGT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.................:.xx:...:x.::.x::.:...:x:.:::...x...::.:.:....::..:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 64124469 NA +3133 chr4 + 190214555 149959020 149959019 149959087 68 TGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTATATATATATATACGTACGTATA chr4 + 94230402 85834541 85834540 85834608 85834541 85834540 85834608 68 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA .....x.................:.xxx...:x.::.:::.:....x...:..:.x..:.:..::... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 64124479 NA +3087 chr4 + 190214555 149967642 149967641 149967711 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:...........::........x.xx.x...xx:.x......::.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 73934445 NA +3070 chr4 + 190214555 149976942 149976941 149977014 73 TGTTATTTGGTCCTCCAGAAATTCAACGAGCAAAACACCTTAAGCATTAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 37818427 37818426 37818498 37818427 37818426 37818498 72 TGTTATT-AATCATACAGAAAGATAAGGGTTAAGAAGCCCTGAGTATTAAAAAAAAAAAGAAAAAAAAACAGA .......-::..x.x......xx:..x.:x:..:.x:..:.:..:..............:.........x.:. 7M1D65M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% 112158515 78056040 +3113 chr4 + 190214555 149976949 149976948 149977025 77 TGGTCCTCCAGAAATTCAACGAGCAAAACACCTTAAGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 3859036 3859035 3859112 3859036 3859035 3859112 77 TGGTTTTACAGAGACTCAACATACTGAGCACGTTTGAATTAAAACAAGAAGGAAGGGAAAAAAAAAAAAAAGAAAAA ....::.x....:.:.....:x:.x:.:...x..x::xx.x...x..:..::..:::..............:..... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 146117913 44096642 +3177 chr4 + 190214555 149995077 149995076 149995218 142 AGTGACACAATAGGAAAAAAGGAAGGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAA chr4 + 94230402 54011582 54011581 54011723 54011582 54011581 54011723 142 AGTAATTTATTAGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA ...:.:x:.x...:......::x.::...:.x.:.:.::......::x.xxxx.:..x.x..x:..::..:.x..:.:x.xx....xxx::....:xxxxx.:x.x:......:..x....:.x...:....:....::... 142M 81/142 57.0% 142/94230402 0.0% 0/142 0.0% 95983495 NA +3436 chr4 + 190214555 149995098 149995097 149995283 186 GAAGGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGGGAGGGGGAGGGAGGAAGGAA-----------------GGGGAAAAGAAAGA-AAGAGGAAAAGA chr4 + 94230402 17246041 17246040 17246230 17246041 17246040 17246230 190 GAAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAG--------------ATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGA ...:..x..x..:xx::...x....x..x::x:...:..........x.....--------------.x.xx.:..:.:...:x.x...xx..:.x:::.:xx.:.:.:...:..:.......xx.xx::...:.:..::.:x:.::x..x......::.-----------------:.x..:........-..:.x..:.... 53M14D93M17I14M1I12M 106/172 61.6% 190/94230402 0.0% 32/172 18.6% 132749057 57465498 +4127 chr4 + 190214555 149995104 149995103 149995354 251 AAGGGAGGGAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAAAGGG-AAGGAGGGAGGG-GGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAG--------AGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAA chr4 + 94230402 1317349 1317348 1317607 1317349 1317348 1317607 259 AGAGCAGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGG--AAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAATGCCAAAAA .::.x..:...x.::..:.x.x:x...xx..:..x:..:.:...xxxx:.:.x..x.::.x.:..xx...::--.....:..:..:..:.:.....:....x.:xx....x..:...x:::..x.:.-x...........-:...:...x.x:::x...:.:..:xxx.:.xxx:....:...:.:x.:xx.x.::..x:.....:::..:xx..:..:..--------..x.:..x..x.:::....:.:.x.xx..:.. 72M2D53M1I12M1I80M8I32M 143/249 57.4% 259/94230402 0.0% 12/249 4.8% 148677755 41536800 +3950 chr4 + 190214555 149995125 149995124 149995244 120 AGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAA-----AGGGAAGGAGGGAGGGGG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ..:...:.:...xx.x.:.............:.....x.:.:.xxx....x.:..:x:::.x.x:...::x..:..:...:....:...:.:.::..x..x.-----.:.x.x.:...:....:. 102M5I18M 77/120 64.2% 125/94230402 0.0% 5/120 4.2% 98846746 91367809 +3471 chr4 + 190214555 149995129 149995128 149995248 120 AGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAG---GAAAGAAAGAAAAGGAAAAGAAAGAAAGG------GAAGGAGGGAGGGGGAGGG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGA----AACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ..:..:.::...xx.x...................----..x....::xx....xx::..x.::.x.x::..---..:.....:...........:.:.:.x:.------....x.x.:...::.:.:. 35M4D33M3I29M6I19M 79/116 68.1% 125/94230402 0.0% 13/116 11.2% 98846750 91367805 +4121 chr4 + 190214555 149995144 149995143 149995356 213 GAGAGAGAGAGAGAGAAA-GAAAGGAAAAGAAACAAAGAAAGAGAAAGA--GAAAGAAAGGAA----AGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGGGAGGGGGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAG---AAGAAAAGAAAA chr4 + 94230402 59372544 59372543 59372752 59372544 59372543 59372752 209 GAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAG-GAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGG-----------GGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAAT--AAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAA ..:.xx.:....:..x..-.x:...::...x..:.:-...:..:...x.--.....x..x...----.:..:.....:x..x.:x..x..x.:.::..:x.::...-----------.....:::....x..x:....:.:...x::x.:x.....:.:..:x..x--.........:x..x..x::.......x..x...:.:x..:---..x..:..:... 18M1I17M1D12M2I12M4I39M11D49M2D40M3I12M 131/199 65.8% 209/94230402 0.0% 24/199 12.1% 90622600 NA +3788 chr4 + 190214555 149995191 149995190 149995378 188 AGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGGGAGGGGGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAAAGAAG chr4 + 94230402 49044660 49044659 49044821 49044660 49044659 49044821 162 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGG-----------AAGAGTTAAAGAAAGAAGAAAGGTGAAAAAT---------------GAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAG .:.:.....:...x:.:...xx...::x:.xx......:x...x..x...::.x.xx:..x:..:.....-----------.....xx..........:..::.::.....x---------------......:......:..x:..:x.:..:.xx:.:.xx.:::::...:.::.x.:.x..x... 70M11D31M15D61M 101/162 62.3% 162/94230402 0.0% 26/162 16.0% 100950531 89264024 +3395 chr4 + 190214555 149995204 149995203 149995410 207 AGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGGGAGGGGGAGGGAGG-------AAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAAAGAAGGAAAGAAAAGAGGGAGGGAGGAGAGAGGGGGA chr4 + 94230402 35408167 35408166 35408380 35408167 35408166 35408380 214 AGAAAAAAAGGGGTAGCACATGACAGGAGAGCACGATGGAGTGCAGTGCCATTCCAAAGAATGGGAATAGAAATGAGGGGGAAAAAAAAAAAAAAAAGCTGATAGCAGCCAAAATAGGCGAGGAAAAGATTAATGAGTAGTGTTGGGAGGGAATAGAGTGAGATGGGAAGAAGGCAGCATGTGACACAAGTGATGTAGCTAGAAGAGATGATGA .....:...:..:x.:x.x.x:.x:...::.x:x..x..:.x.x::x.-------..:...x.....x.....x:.:.:......:...:.....:...x:.x.:x.:xx..::x.:.x:..:..:...xx..x:.:x.:x:xx::::::...x...:x::..x..:.:.....x.:x:x:x..x.x..:x..x.x..xx..:.....x.:x.. 48M7I159M 114/207 55.1% 214/94230402 0.0% 7/207 3.4% 114587037 75627518 +3462 chr4 + 190214555 149995219 149995218 149995337 119 AGAAAGAAAGGGAAGGAG---------GGAGGGGGAGGGAGGAAGGAAGGGGAAA-AGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAA chr4 + 94230402 32265498 32265497 32265625 32265498 32265497 32265625 128 AGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAG-AGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAA ..::..x.x..::.....---------....x.x.....:..:..xxx......:-....x.x.x.x.x.:x:...:...:..:..-.:.::...::.:...:.:.:.....:..:..x..x.:..... 18M9I28M1I30M1D42M 79/118 66.9% 128/94230402 0.0% 11/118 9.3% 117729721 72484834 +3249 chr4 + 190214555 149995233 149995232 149995390 158 GGAGGGAGGGGGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAAAGAAGGAAAGAAAAGAG chr4 + 94230402 76625702 76625701 76625859 76625702 76625701 76625859 158 GGTAGGATGGGACTGGGTAAACAAGGGAAAGAAGCTGCGAAGTGAAAACAAAACAAAACAAAAAACAAATAGGATAGAAGTGGAACAGAGAGAACAGAGTGGAAAACAAATACAGAAGGACTGTGGAAAAAATAAGAATAAAGATGCACAGAAGGAAG ..x:...x...:xx..:x:..x:.:..::.:...xx:x:...x.:...x:...x....x:.:x..x...x.::.x..:.:x.:..x.:......x.:.:x:.....x...x:x....:::xx:x....::..x:.:::x.....x.x.x....:::.. 158M 88/158 55.7% 158/94230402 0.0% 0/158 0.0% 73369531 NA +3562 chr4 + 190214555 149995253 149995252 149995372 120 AGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGA-GCAAAAAAGAAAAAAGGAA---AGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ..:...::...:xx.x...:....::.:.........x...-.:xx.:..xx:...x....---:..::.x:......:.....:......:.::..x::x.xxxx:.:.x.x........... 41M1I19M3I60M 78/120 65.0% 124/94230402 0.0% 4/120 3.3% 98846874 91367681 +3531 chr4 + 190214555 149995256 149995255 149995358 103 AAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAG--AAGAAAAGAAAAGG chr4 + 94230402 15855375 15855374 15855479 15855375 15855374 15855479 105 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGG ...:.x...:::.:::...x...x........xxx:..xx.:xx...::...::xxx...:...:..........:.:......:.x..--.....x::...... 89M2I14M 68/103 66.0% 105/94230402 0.0% 2/103 1.9% 134139881 56074674 +3301 chr4 + 190214555 149995261 149995260 149995354 94 GAAAAGAAAGAAAGAGGAAAAGAAAGAAA---AAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAA chr4 + 94230402 65363844 65363843 65363940 65363844 65363843 65363940 97 GAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAA .....:x.xx..:.x.:..:....:..x.---....:x..x..:.....:......x.x......::.xx:.::....:.x.....:.x..x.:... 29M3I65M 64/94 68.1% 97/94230402 0.0% 3/94 3.2% 84631417 NA +3199 chr4 + 190214555 149995265 149995264 149995340 76 AGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x......:...:..............:.x...:..x:x..::.:.xx.xx.x.:...:..x::....:....:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 111916487 78298068 +3067 chr4 + 190214555 149995308 149995307 149995373 66 AGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAA chr4 + 94230402 33373313 33373312 33373378 33373313 33373312 33373378 66 AGGAAGAGAAGAAAGAGAAGCCAAAAGACAAGGACAAAAGAAATGACAGAGTGAGACAGCAGGGAA .....:::............xx......x...:.x.:......x..x.::.x::..x:.x...... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 116621995 73592560 +3748 chr4 + 190214555 149995311 149995310 149995446 136 AAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAAAGAAG----GAAAGAAAAGAGGGAG--GGAG-----GAGAGAGGGGGAGGAAGGAGGGAC-GGAAGGAAGGGAGGGAGGAAGGAA chr4 + 94230402 84536569 84536568 84536716 84536569 84536568 84536716 148 AGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAA .::.....::.:....:....x.:x...:.x.:....x:.......::::.:....:..:.:......----.x.:x....xx:.x..--.:..-----:.....::.:x.::x..:......-..:......:..xx:..:.:.x.. 68M4I16M2I4M5I24M1I24M 89/136 65.4% 148/94230402 0.0% 12/136 8.8% 65458742 NA +3240 chr4 + 190214555 149998782 149998781 149998847 66 GTGGCGCACACCTGTATTCCCAGCTACTTGGGAGGCTGAGCCACAAGAATCCCTTGAGCCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:....:--....x.:...........::..........x::x...x.x.....:..::.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 73965581 NA +4165 chr4 + 190214555 150049314 150049313 150049396 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGAGGTTGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:.........::::........x.xx.x...x.......:.....:..x..x:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 74016117 NA +3225 chr4 + 190214555 150053747 150053746 150053847 101 CGTGGTGGTGGGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCTCGAACCCGGGAGGCAGAGGTTGCAGTGAGTCGACATTGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::......--:..x....:.:...........::........x.xx.x...xx:..:......:.:..x:xx:..:..:..------:....x:..... 10M2D71M6D12M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% 74020550 NA +3654 chr4 + 190214555 150057107 150057106 150057173 67 TGAAGTCCCAGCTACTTGGAAGGCTGAAGCGGGAGGATCGCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x...:...........:........:x.xx.x.:.x.:.....:.....:..:..x:.....:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 74023896 NA +3488 chr4 + 190214555 150069276 150069275 150069363 88 TAACAGAGTGAGGCCCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAA chr4 + 94230402 38128951 38128950 38129038 38128951 38128950 38129038 88 TAACACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCAAAA .....x.:.:..::.x..::.::x..xx.:....::x..x.....x............x...::.........x...::.x::x.... 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 111940325 78274230 +3264 chr4 + 190214555 150069292 150069291 150069395 104 TGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAAGAAAGAAAATCTGGAGAAGAATAAGATATTT chr4 + 94230402 42234748 42234747 42234844 42234748 42234747 42234844 97 TGCTTTCAAAGCAAAGTAATTAAAGAAAAAAGAAAAATAAAAAAAAAGTGAAGCAAGATTAATAAGAAACAGGGAAAGTAGAT-------AAAACAAGATTTTT ...:.:x...:x...:x..xx...:..........:.x..........x:...x..::xx:.x..:.:.x.::.....x.:..-------.:..:.....x... 83M7D14M 66/97 68.0% 97/94230402 0.0% 7/97 7.2% 107834544 82380011 +28314 chr4 + 190214555 150079018 150079017 150079456 439 AGCAGCCGCGATGGCCAGCACCAGGAGTATCGAGCTGGAGCACTTTGAGGAACGGGACAAAAGGCCGCGGC---CGGGGTCGCGGAGAGGGGCCCCCAGCTCCTCCGGGGGCAGCAGCAGCTCGGGCCCCAAGGGGAACGGGCTCATCCCCAGTCCGGCGCACAGTGCCCACTGCAGCTTCTACCGCACGCGGACCCTGCAGGCCCTCAGCTCGGAGAAGAAGGCCAAGAAGGCGCGCTTCTACCGGAACGGGGACCGCTACTTCAAGGGCCTGGTGTTTGCCATCTCCAGCGACCGCTTCCGGTCCTTCGATGCGCTCCTCATAGAGCTCACCCGCTCCCTGTCGGACAACGTGAACCTGCCCCAGGGTGTCCGCACTATCTACACCATCGACGGCAGCCGGAAGGTCACCAGCCTGGACGAGCTGCTGGAAGGTAGGAGG chr4 + 94230402 33892004 33892003 33892436 33892004 33892003 33892436 433 AGCGGTCCCCATGGCGAGCAGCCGGAGCATCGAGCTGGAGCACTTCGAGGAGCGGGACAAGAGGCAGCAgcgcgccgggccgcggcgcggcggatcgggctc------gggcggcggcg---cggggccgcggggcAACGGGTTGATCCCCAGCCCCGCACACAGCGCCCACTGCAGCCTCTACCGCACGCGGACGCTGCAGGCGCTCAGCTCGGAGAAGAAAGCGCGCAAAGCCCGCTTCTACCGCAACGGGGACAAGTACTTCAAGGGCTTGGTGTATGCCATCTCCAGCGACCGCTTCCGCTCCTTCGACGCTCTCCTCGCCGAGCTCACCCGCTCCCTGTCGGACAACGTGAACCTGCCCCAGGGTGTCCGCACCATCTACACCATCGATGGCAGCAAGAAGCTCTCCAGCCTGGACGAGCTGCTGGAAGGTGAGGGG ...:.:.x.x.....x....x.x....:.................:.....:........:....x..:..---.x...:.....x.x..x.xx:.x:....------....:..:..:---....x..xx:...x......:.x........:..x..:.....:............:................x........x.................:..xx:x..:..x...........x.........x:x............:......x........................x........:..x......::x.....................................................:..............:......x:....x..x..........................::.:.. 71M3I28M6D11M3D320M 362/430 84.2% 433/94230402 0.0% 12/430 2.8% 116187014 74027541 +15038 chr4 + 190214555 150079163 150079162 150079506 344 CCCAGTCCGGCGCACAGTGCCCACTGCAGCTTCTACCGCACGCGGACCCTGCAGGCCCTCAGCTCGGAGAAGAAGGCCAAGAAGGCGCGCTTCTACCGGAACGGGGACCGCTACTTCAAGGGCCTGGTGTTTGCCATCTCCAGCGACCGCTTCCGGTCCTTCGATGCGCTCCTCATAGAGCTCACCCGCTCCCTGTCGGACAACGTGAACCTGCCCCAGGGTGTCCGCACTATCTACACCATCGACGGCAGCCGGAAGGTCACCAGCCTGGACGAGCTGCTGGAAGGTAGGAGGGGAGGGCGCCGCACGGCAGGTGCGGCGGAGCGCCGGCAGGTGCAGTGGGC chr4 + 94230402 13331735 13331734 13332071 13331735 13331734 13332071 337 CCCAGCCCCACTCACAGTGCTCATTGTAGCTTCTACAGAACCAGGACCTTACAGGCACTGAGTAATGAGAAGAAAGCCAAGAAGGTGCGTTTCTATCGCAACGGGGACCGCTACTTCAAGGGAATTGTATATGCTGTGTCTTCCGACCGCTTCCGAAGTTTTGATGCTCTCCTGGCTGACCTGACCCGGTCCCTGTCTGACAACATTAATCTGCCTCAGGGAGTCCGTTACATTTACACCATTGATGGATCGCGGAAGATTGGAAGCATGGATGAGCTGGAGGAAGGTAAT------TGGCATTGC-TGGCTGGTGCAGTGAGGAGGCGGGGTGAGAAGGGGGC .....:..x:.x........:..:..:.........x.x..xx.....:.:.....x..x..:xxx........:..........:...:.....:..x.......................xx.x..:.x...::.x..:xx............:xx:..:.....x.....x::x..x..x.....x........x......:.x..:.....:.....x.....:xx:..:........:..:..xxxx......:.::xx...x....:......xx........:x------x...:::..-:...x.....:.:.::.x.x...x:x.x.x..x.... 291M6D9M1D37M 243/337 72.1% 337/94230402 0.0% 7/337 2.1% 136747428 53467127 +4053 chr4 + 190214555 150101115 150101114 150101197 83 CATAGTGGCATGTGCTTGTAATCCCAGCTACTTGGAAGGCTGAGGTGGGAGAATCACTTGAGTCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....--..::.x....:.:...........:.........x:xx.x...x.......::....:..x..x:.....:.. 8M2D73M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 74067918 NA +13009 chr4 + 190214555 150102464 150102463 150102823 360 ATTTTGCTTTTTAGGTGAGAGTTACGTGTGTGCATCCAATGAACCATTTCGTAAAGTCGATTACACCAAAAATATTAATCCAAACTGGTCTGTGAACATCAAGG------------GTGGGACATCCCGAGCGCTGGCT-GCTGCCTCCTCTGTGAAAAGTG---AAGTAAAAGAAAGTAAAGATTTCATCAAACCCAAGTTAGTGACTGTGATTCGAAGTGGAGTGAAGCCTAGAAAAGCCGTGCGGATCCTTCTGAATAAAAAGACTGCTCATTCCTTTGAACAAGTCTTAACAGATATCACCGAAGCCATTAAACTAGACTCAGGAGTCGTCAAGAGGCTCTGCACCCTGGATGGAAAGCAGGTAAGATGCTT chr4 + 94230402 13341296 13341295 13341661 13341296 13341295 13341661 366 ATTTCTTTTGAAAGGGGAGAGTTACGTATGCTCATCTGACAACTTCTTCAAGAAGGTGGAATACACAAAGAACGTCAATCCCAACTGGTCTGTCAATGTGAAAACATCTGCTAACCAGAAAGCACCACAGTCTCTGGCCAGCAGC----------AACAGCGCCCAGGCAAAGGAGAACAAAGATTTTGTGCGTCCCAAGCTGGTAACCATCATCCGTAGTGGGGTGAAGCCCCGGAAGGCAGTTCGCGTGCTCTTGAACAAGAAGACGGCCCATTCGTTTGAGCAAGTTCTCACTGATATCACTGAAGCTATAAAGCTGGAGACAGGAGTGGTCAAAAAGCTGTATACTCTGGATGGAAAGCAGGTAAGAGATTT ....:x:..xxx...x...........:..:x....::.::.x::x..:x:x..:..x..x.....x..:..::.:.....x...........x..::.x..::------------:x::::..:.x.::x.x.....:-..x..----------..x..:.---.:.:...:..:.::........::.xx:x......:.:..:..::.x..:..x.....:........:x.:..:..x..x..x:.x..::....:..:.....x..:.....x.....:.....::.x..x........:.....:..x..:..:..xx.......x.....:.:...x.::..:.....................x::.. 104M12I23M1I5M10D7M3I211M 238/350 68.0% 366/94230402 0.0% 26/350 7.4% 136761168 53453387 +22099 chr4 + 190214555 150102465 150102464 150102818 354 TTTTGCTTTTTAGGTGAGAGTTACGTGTGTGCATCCAATGAACCATTTCGTAAAGTCGATTACACCAAAAATATTAATCCAAACTGGTCTGTGAACATCAAGGGTGGGACATCCCGAGCGCTGGCTGCTGCCTCCTCTGTGAAAAGTGAAGTAAAAGAAAGTAAAGATTTCATCAAACCCAAGTTAGTGACTGTGATTCGAAGTGGAGTGAAGCCTAGAAAAGCCGTGCGGATCCTTCTGAATAAAAAGACTGCTCATTCCTTTGAACAAGTCTTAACAGATATCACCGAAGCCATTAAACTAGACTCAGGAGTCGTCAAGAGGCTCTGCACCCTGGATGGAAAGCAGGTAAGA chr4 + 94230402 33906878 33906877 33907231 33906878 33906877 33907231 354 ttttttttttCAGGTGAAAGTTATGTATGTGCATCCAATGAACCATATCGGAAAGTTGATTATACCAAGAATGTCAATCCAAACTGGTGTGTGAACATAAGGACCGGGTCCACTCGATCCCTGACATCTTTGACATCCACAAAGAGTGAAGTGAAGGAAAGTAAAGATTTCATTAAACCCAAATTGGTGACTGTTATTAGGAGTGGAGTAAAACCACGAAAAGCTGTGAGAATTCTGCTGAATAAGAAGACTGCTCACTCCTTTGAACAGGTCTTGACTGACATCACAGAAGCCATTAAGTTAGATTCGGGTGTTGTCAAGAGACTCTGTACACTGGATGGAAAGCAGGTAGGA ....x:....:......:.....:..:...................x...x.....:.....:.....:...:.:.............x.........x.:.:x:...x.xx.:...x.x...:.xx..x:xx.x..::::..:........:..:.................:........:..:........x...x.:........:..:..xx.......:...x.:..:..x........:...........:...........:.....:..x..:.....x...........::....:..:..x..:........:.....:..x..................:.. 354M 282/354 79.7% 354/94230402 0.0% 0/354 0.0% 116195587 74018968 +4044 chr4 + 190214555 150104210 150104209 150104330 121 GGGAAAATATA-GGTGAAATAAAAGAAGTTGTGGTCAGGTGTGGTGGTGCACTCCTATAGTTCCAGCTACTTGGGAGGCTGAAGTGGGAGGATCCTTTGAACCCAGGAGTTTCGGGCTGCAG chr4 + 94230402 76033165 76033164 76033277 76033165 76033164 76033277 113 GGGAAAGTATGTAATGTCATGAAAG-------GATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:...:-::..xx..:....-------.:.x.x:::::.........x--.:................::.......:x:xx.x.:.x.x:..........:..:..:......:.. 11M1I13M7D21M2D67M 79/112 70.5% 113/94230402 0.0% 10/112 8.9% 74071045 NA +3265 chr4 + 190214555 150125761 150125760 150125833 73 TGCACCTGTAATCCCAGCTACGTGGGAGGCTGAGGCAGAAGACTCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:........x..::........x.xx:x..xx...........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 74092556 NA +3483 chr4 + 190214555 150129581 150129580 150129662 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x:..x.:...........:..x:xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 74096380 NA +3303 chr4 + 190214555 150134816 150134815 150134854 39 TGTTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTGAG chr4 + 94230402 81178913 81178912 81178951 81178913 81178912 81178951 39 TGTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTAAG .....x..............................:.. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 68955903 NA +3122 chr4 + 190214555 150136921 150136920 150136999 79 AGCATATAACTGTAATTCCAAAAATGTA-TTTATTT--CTCATCTTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980283 44980282 44980354 44980283 44980282 44980354 72 AACATATAA----------AGGAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT .:.......----------.::......-..:....--.::x:.............:x.:............:......... 9M10D9M1I7M2I44M 57/69 82.6% 72/94230402 0.0% 13/69 18.8% 105156638 85057917 +3165 chr4 + 190214555 150157463 150157462 150157512 50 TTTTGTATTTTTTGTAGAGATGGTTTTTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 27992739 27992738 27992788 27992739 27992738 27992788 50 TCTTGTACATTTTATGATGATGGTTTTTTTTTTTGTTTGTTTGTTTTTTT .:.....:x....:.::x............x...............x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 122164724 68049831 +3318 chr4 + 190214555 150157472 150157471 150157536 65 TTTTGTAGAGATGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGCTG chr4 + 94230402 28945997 28945996 28946059 28945997 28945996 28946059 63 TCTTGTTAAGATGGGTTTTTTGTTTGTTTGTTTGTTAGGC--TTTTTTTTTTTTTTTTTGGACTG .:....x:......x.....................x.x:--...x...x...x......::... 40M2D23M 51/63 81.0% 63/94230402 0.0% 2/63 3.2% 121211475 69003080 +3069 chr4 + 190214555 150158829 150158828 150158904 76 CAGCTGAGGTGACAGTGAGACACCATCTCAAAAAAGAAAAGAAAAAAGAAAGAAATGCAAGCAGAAAAACAACCCA chr4 + 94230402 88382706 88382705 88382777 88382706 88382705 88382777 72 CAGCAAAGG----AGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACA ....x:...----..::.....x.x.........:..:..:......:...::x..:x.....x..x...x..x.. 9M4D63M 53/72 73.6% 72/94230402 0.0% 4/72 5.6% 61776123 NA +3739 chr4 + 190214555 150164663 150164662 150164741 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACACAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:...........::........x.xx.x...x::.......x...:..x.xx:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 74131462 NA +3649 chr4 + 190214555 150166364 150166363 150166436 73 TGCACCTGTGGTCCTAGCTACTTGGAAGGCTGAGTTAGGAGGATCACTTGAGCCTGGGAGATGAAGGCTGTGG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:.:.........:.........::xx.x.:.x.......:..::.:..x.xx:......:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 74133159 NA +6083 chr4 + 190214555 150166746 150166745 150167021 276 TTTGTTCATGCAATCTTTGTGCACTGTCATGAAGAGGTGGGTGCTTGCTGGGCTGATTGCTGGTCCTTTTCTGATTAGGAGACAACGCTCAAAAAGCAGCACTTCTGACTTTTTTCAGATCCTT--------CTGAATGGCAG-GGAGCCTTGCCTCC----TTTTCAGAGATCTTCCTTGTCTTAAGG-ATAAGTGGTGGGCGGGACACTGCCTAATGATAACTATGATCATGTAAAATAGCCACTGATTAAAGAGTAGTTCACTGGGCCCGCCTGGG---TGCATTATTCT chr4 + 94230402 33925721 33925720 33926012 33925721 33925720 33926012 292 TCTGTTCATGCAGTCTTTCTGCATTGTCATACTGTATTAGGCGTTTCCTGGGCTTACTGCCAAACTTTTTCCATTTACAAGGCAGCAGGCAAATA-CTTAACATTTGTTTTCTTTCTTACTCTTCAGATTCCCTGTAGGACAGAAGGATTTTGTCTCCTTCATTTTCACTGCTGTTCCTCATCACAGGGTATCTGTGAAAGAAGGTTCATTTTCTGATTATGACTCTAAGAATGTGTCACAGTCCATGATTAAACAGTCATTTAAGAAGCTGGCCTAGGACATGGATTCTTCT .:..........:.....x....:......:xx.x:x.:..:.:..x.......x.:...:::x.:.....::x...x:..:..:.:xx....x.-.xxx..x.:..x:..:....xx.::...--------...x.x.:...-:.::::...:....----......xx.x.x.....::..x:.:..-..xx...:x:.:x..xx..:.x:..:..x..:...x.:.xx....:xx.:..:.xx........x...x:..:.xx::..:x....:..---..x...x.... 95M1D28M8I11M1I14M4I27M1I89M3I11M 174/275 63.3% 292/94230402 0.0% 18/275 6.5% 116241025 73973530 +3308 chr4 + 190214555 150174867 150174866 150174940 74 GTGCCCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:.:.........::::........x.xx.x...x..........::.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 74141663 NA +3557 chr4 + 190214555 150192350 150192349 150192422 73 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCATTTGAACTTGGGAGATGGAGATTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:...........::........x.xx.x...x..:......:::.:..x.xx:.::..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 74159145 NA +7562 chr4 + 190214555 150193097 150193096 150193263 167 ATGTGTCTAATTTATTTCTTGGACATGATTTTTGTTCTCA-GGTTACTTGTCTGCAAGACTTTTTTGGTGATGACGATGTTTTTATTGCATGTGGACCAGAAAAATTTCGTTATGCCCAAGATGACTTTGTCCTGGATCATAGTGGTAAG---GCAATTCTTCAGCTAATT chr4 + 94230402 33931026 33931025 33931190 33931026 33931025 33931190 165 ATTTGTTTATTTTACTCT------ATGTGTTTTGCCATTAAGGTGACATGCTTGCAGGACTTCTTTGGAGATGATGATGTCTTCATTGCATGTGGACCTGAAAAATATCGGTATGCTCAGGATGACTTCGTTTTGGATCACAGCGGTAAGATTGCATTTCCTGAACCCACT ..x...:..x....:.::------...xx.....::x.:.-...x..x..::....:.....:.....x.....:.....:..:..............x.......x...x.....:..:........:..::.......:..:......---...x...:.x.:.:x.:. 18M6D16M1I109M3I18M 122/161 75.8% 165/94230402 0.0% 10/161 6.2% 116262071 73952484 +6698 chr4 + 190214555 150193127 150193126 150193270 144 TTTGTTCTC-----AGGTTACTTGTCTGCAAGACTTTTTTGGTGATGACGATGTTTTTATTGCATGTGGACCAGAAAAATTTCGTTATGCCCAAGATGACTTTGTCCTGGATCATAGTGGTAAGG-----------CAATTCTTCAGCTAATTCATTTTT chr4 + 94230402 13384208 13384207 13384367 13384208 13384207 13384367 160 TTTGCTCTCTCTATAGGTGACCTGTCTCCACGATTTCTTTGGGGATGATGATGTGTTTATTGCCTGTGGTCCCGAAAAATTCCGCTATGCACAGGATGACTTTTCTCTGGATGAAAGCGGTAATGTTGAACACACACTGTTCTTCAATCTGTTCTTATTT ....:....-----....x..:.....x..x..:..:.....x.....:.....x........x.....x..x........:..:.....x..:.........x::......x.x..:.....x.-----------.x:.......:::x:...x.x... 9M5I111M11I24M 111/144 77.1% 160/94230402 0.0% 16/144 11.1% 136808919 53405636 +3857 chr4 + 190214555 150197615 150197614 150197697 83 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 74164418 NA +6448 chr4 + 190214555 150197995 150197994 150198106 112 TTTCTAGAATGTCGTGTCCTGAAGTCATCTTATTCTCGATCCTCAGCTGTTAAGTATTCTGGATCCAAAAGCCCTGGGCCCTCTCGACGCAGCAAATCACCAGCTTCAGGTA chr4 + 94230402 33932937 33932936 33933048 33932937 33932936 33933048 112 TTTGCAGAATGCCGTGTTATGAAATCATCTTACTCCCGATCATCTGGCATGAGGTATTCTGGGTCCAAAAGTCCAGGACCTTCACGTCGAAGCAAATCACCTGCATCAGGTA ...x:......:.....:x....:........:..:.....x..x.x::.x.:.........:........:..x..:..:..x..x..x...........x..x....... 112M 87/112 77.7% 112/94230402 0.0% 0/112 0.0% 116265058 73949497 +8781 chr4 + 190214555 150198942 150198941 150199145 204 TTTTACCCTT-----TTGAACGCACATTTAGAGCTGCTGAATAACCACTCTCCTTACTGTCTTCT-ACTCTGTGTATACTGCATGTGTACAGTAAAGCGGGGTGGCCACTACTCCAGTGCCTATTCTACAGCCAAATCCCCAGGTGAGCCATGACTATTGTGGCTTTGTTGCTCTGCTGGGTTTTTGTTTTTGTTTTTTGCCACTTTTCT chr4 + 94230402 33934226 33934225 33934434 33934226 33934225 33934434 209 TTTTTCCCTTCTTTCTTTCGTGCATGTTCAGAGCTGTTTAATAACTTTTCTCCTTAATGTCTTTTTCCTTTGTGTCAAATATATGAGTACAGTTAAGAGGGGTGGCCACTACTCCAGTGCTCATTCTTCAGCAAAATCCCCAGGTGAGCCATTACAGTTATGGCTGTATATCACTAGCGTGTCTCC-TTCCTCTCCATTTCCACTTCCCT ....x.....-----..xx::...::..:.......:.x......:x:........x......:.-x..:.....xx.x.::...x.......x...x......................::.....x....x...................x..x:..:.....x.:.xx.x..:x:.x..:.::-..::.x.::x..x......::.. 10M5I50M1I120M1D23M 149/203 73.4% 209/94230402 0.0% 7/203 3.4% 116264716 73949839 +6615 chr4 + 190214555 150203747 150203746 150203892 146 TTGTGGGTTTTAATGGGACTTCTGTCTTCTTTGTTGTCTCA---TGGGCAGTTAATGGAACTCCCAGCAGCCAACTTTCTACTCCTAAATCTACGAAATCCTCCAGTTCCTCTCCAACTAGTCCAGGAAGTTTCAGAGGATTAAAGGTA chr4 + 94230402 33936620 33936619 33936768 33936620 33936619 33936768 149 TTGTTTGTTTTTAATCATCTTCCATTTGTTTGCTTGTATTACTTTTGGCAGTTAATGGAACCCCAAGCAGTCAGTTGTCCACTCCAAAATCTACAAAGTCCTCCAGTTCTTCACCAACAAGCCCAGGCAGCTTTCGTGGACTCAAGGTA ....xx.....x.xxx:x....::.:.x:..xx....x.:.---.x...............:..x.....:..::.x..:.....x........:..:...........:..x.....x..:.....x..:..:x.x...:.x...... 41M3I105M 107/146 73.3% 149/94230402 0.0% 3/146 2.1% 116267127 73947428 +3213 chr4 + 190214555 150208387 150208386 150208444 58 AGTTTTTTTTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTTGTTTTGAGAC chr4 + 94230402 50433360 50433359 50433417 50433360 50433359 50433417 58 AGTTCTTTTTATTGTTGTTGCTGGTTTTTGTTTTGTTTTGTTTGTTGTTTTTTTAAGC ....:.....x.....x...:.xxx.....................x.x....x.::. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 99775027 90439528 +3463 chr4 + 190214555 150210809 150210808 150210890 82 GTGGTGGCATGTGCCCATAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-..:...----....:........:..::........x.xx.x...x.............:..x:xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 74177608 NA +4701 chr4 + 190214555 150220667 150220666 150220782 116 TTATCCTGATAAATAATGGTCATTCTCCTCTTTCAGCAGATTTCTGCTCATGGCAGATCTTCTTCCAATGTAAACGGTGGACCTGAGCTTGACCGTTGCATAAGTCCTGAAGGTAG chr4 + 94230402 33943800 33943799 33943915 33943800 33943799 33943915 116 TTATCATGATAAATAACAAGATCTTATGTGCTTTTATAGCTCCCTCCTCATGGTGGATCATCGTCCAATGTGAATGGTGTACCTGAATCAGTCCATTGCCAGAGTCCTGAAGGTAG .....x..........:::xxx:.:x:x.x:..:x::..x.::..x.......::....x..x........:..:....x......:::x.x..:....xx:.............. 116M 78/116 67.2% 116/94230402 0.0% 0/116 0.0% 116276867 73937688 +8563 chr4 + 190214555 150221635 150221634 150221811 177 TGCTGATGTTTTCTTTAGAATTTGCATTTAT-------CCTTTTTGCAGGTGTGAATGGAAACAGATGCTCTGAATCATCAACTCTTCTTGAGAAATACAAAATTGGAAAGGTCATTGGTGATGGCAATTTTGCAGTAGTCAAAGAGTGTATAGACAGGTGAGTGGACAGTGAGGATAATTAAT chr4 + 94230402 33944524 33944523 33944703 33944524 33944523 33944703 180 TGCTGACTTCTGCTCTTCAGTTTGTGTTACTGACCTTGCTTTTCTGCAGGTGTGAATGGAAACAAGTGCTCAGGGTCATCCACCATTCTTGAGAAGTATAAAGTCGGAAAGGTGATTGGTGATGGCAATTTTGCTGTTGTGAAGGAGTGCATAGAACGGTGAG----CAAGGAGAACATTCAGT ......:x.:.x..:.xx.:....::..xx.-------.:...:....................::.....x.::.....x..:x..........:..:...:.:........x....................x..x..x..:.....:.....xx......----..:x...:.:.x.:.:. 31M7I125M4D17M 132/173 76.3% 180/94230402 0.0% 11/173 6.4% 116277111 73937444 +5387 chr4 + 190214555 150224452 150224451 150224602 151 TGGTATTTAATTTATGTCTTTAAATGGTCTTCCTCTGATTATTCCATAGGTCCACTGGAAAGGAGTTTGCCCTAAAGATTATAGACAAAGCCAAATGTTGTGGAAAGGTATAGTATGCATAACCCCTAGTTCTGAAAGAAACTAGAGTAAC chr4 + 94230402 33948278 33948277 33948414 33948278 33948277 33948414 137 TGGTTTCTGATTCACATTTTCATATTTTCTCACT-------------AGATCCACAGGAAAGGAGTTTGCGCTGAAGATTATAGACAAGGCTAAATGCTGTGGAAAGGTACTGTGCG-ACAATTTACATGTTTAAGAAAAACAGCAGCAGC ....x.:.:...:.::.:..:.x..xx...:x..-------------..:.....x..............x..:..............:..:.....:............:x..::.-.:..:::x:.xx.:.:.:.:....x:x..:.:. 34M13D70M1D33M 96/137 70.1% 137/94230402 0.0% 14/137 10.2% 116276174 73938381 +10153 chr4 + 190214555 150232315 150232314 150232480 166 CTCTATACCGTTCATTTGACAGGAACACCTGATTGAGAATGAAGTGTCAATACTGCGCCGAGTGAAACATCCCAATATCATTATGCTGGTCGAGGAGATGGAAACAGCAACTGAGCTCTTTCTGGTGATGGAATTGGTCAAAGTAAGAGGATAGAGAGATTTTCTT chr4 + 94230402 33951762 33951761 33951924 33951762 33951761 33951924 163 CTCTGTACCCTTTACT-GACAGGAACACCTGATTGAAAATGAAGTGTCTATTCTACGTCGAGTGAAGCATCCGAATATCATTATGCTGATAGAGGAAATGGACACTCCAACAGAACTCTATCTGGTGATGGAGCTGGTCAAGGTAAGA--CTAAGGAGATTTTTTT ....:....x..:.:.-...................:...........x..x..:..:........:.....x...............:.x.....:.....x..xx....x..:....x............::.......:......--x..::........:.. 16M1D131M2D16M 136/163 83.4% 163/94230402 0.0% 3/163 1.8% 116280553 73934002 +10696 chr4 + 190214555 150232610 150232609 150232876 267 ATGAGCCATCTTTCTTACCTTCATAGGATTGCACTGTTGATGCTTTGATATGTTCTTTTATGTATCGTTTAGGGTGGAGATCTCTTTGATGCAATTACTTCGTCGACCAAGTACACTGAGAGAGATGGCAGTGCCATGGTGTACAACTTAGCCAATGCCCTCAGGTATCTCCATGGCCTCAGCATCGTGCACAGAGACATCAAACCAGAGAATCTCTTGGTATGTCATCCCTGCTTTTTCTGTTCCAATGAATGCCTCTCTTCCTTT chr4 + 94230402 33953456 33953455 33953697 33953456 33953455 33953697 242 ATAAATTATCTTTATTATTTTTCCTGGACTGACCTATT--------------CTCTTTCCT---TACTCTAGGGAGGAGATCTATTTGATGCTATCACTTCTTCTACAAAATACACAGAGCGAGATGGGAGTGCTATGGTCTACAACCTGGCCAGCGCGCTCAAGTACCTTCATGGTCTCAACATTGTGCACAGAGACATCAAGCCAGAAAATCTCCTGGTGCGTC-------TCATTTATTTTCTAAT-ATTTTCTTTCTTACTTT ..:.:::......x...::..:x:x...:..xx..:..--------------:.....:x.---.xx.:.....x........x........x..:.....x..x..x..:.....x...x.......x.....:.....x......:.:....::..x....:...:..:.....:....:...:.................:.....:......:....::...-------::x...x.x...:...-.x.x:..:....x.... 38M14D9M3D162M7D16M1D17M 181/242 74.8% 242/94230402 0.0% 25/242 10.3% 116279154 73935401 +10314 chr4 + 190214555 150239692 150239691 150239880 189 ATTGTTGAGGAAAAAAAAA------------------TCTTCTGATTGTTGGCTGATTTCTGTTTC---------AGGTGTGTGAATATCCTGATGGAACCAAGTCTTTGAAACTGGGAGACTTTGGGCTTGCGACTGTGGTAGAAGGCCCTTTATACACAGTCTGTGGCACACCCACTTATGTGGCTCCAGAAATCATTGCTGAAACTGGGTAAG chr4 + 94230402 33957766 33957765 33957978 33957766 33957765 33957978 213 attattaaaaaaaaaaaaaaattaaaaatCTCAATATCCTTCTCACCATT--CTG-TTTCTATTTTGCTGATTCTAGGTATGTGAATATGCAGATGGAACCAAATCTTTGAAGCTAGGAGACTTTGGACTGGCAACTGTGGTTGAAGGACCCTTATATACCGTCTGTGGTACGCCCACATATGTGGCTCCAGAAATCATTGCAGAAACAGGGTGAG ...:..:.::.........------------------:.....x.:::..--...-.....:...:---------....:.........x.x...........:........:..:...........:..x..:........x.....x..:.....:..x........:..:.....x.......................x.....x....:.. 19M18I13M2D3M1D10M9I141M 155/186 83.3% 213/94230402 0.0% 30/186 16.1% 116281926 73932629 +6503 chr4 + 190214555 150240382 150240381 150240482 101 CCACTTTGTTTTCCTAGCTATGGCCTGAAGGTGGACATTTGGGCAGCTGGTGTGATCACATACATACTTCTCTGTGGATTCCCACCATTCCGAAGGTAGGC chr4 + 94230402 33959026 33959025 33959126 33959026 33959025 33959126 101 CCATCTTGTTTCCTCAGATATGGCTTAAAGGTGGATATTTGGGCCGCAGGCGTGATCACATACATACTGTTATGTGGATTTCCACCTTTTCGCAGGTAAGC ...::......:.::..x......:.:........:........x..x..:.................x:.x........:.....x..:..x.....:.. 101M 81/101 80.2% 101/94230402 0.0% 0/101 0.0% 116281356 73933199 +3039 chr4 + 190214555 150240704 150240703 150240795 92 CTAACCTG---CACAATGTGCACATGTACCCTAAAACTTAAAATATAATAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAATCAGAAAAAAAAAAT chr4 + 94230402 74108172 74108171 74108266 74108172 74108171 74108266 95 CTTACCTGTCACCCTATGTGCACACACACTCAAGTATTTAGGATTTTACAGAAGAATTAAAAAAGAAAACAAAAAAAAAACTAAAAGTAACATAT ..x.....---.x.x.........:::..:.x.:x.:...::..x.x.:.:..:..xx....:.:...:x..........::.:..:x..x.x.. 8M3I84M 61/92 66.3% 95/94230402 0.0% 3/92 3.3% 76132532 NA +7372 chr4 + 190214555 150247546 150247545 150247703 158 GTTGAAAAATTCTACGGTGACTTTGACTTTTCT--TCCATTTCTTTGTCACTGG--CTTAGTGAGAACAATCTCCAGGAAGATCTCTTCGACCAGATCTTGGCTGGGAAGCTGGAGTTTCCGGCCCCCTACTGGGATAACATCACGGACTCTGCCAAGGTAC chr4 + 94230402 33960419 33960418 33960580 33960419 33960418 33960580 162 GTTTAAAACTTGCCTGATGGACTTCATTCTCCTGATCTCTTTCATTATTGCTGTTCCGCAGTGAAAACAACCTTCAGGAAGACCTTTTCGATCAGATACTTGTTGGGAAGCTGGAATTTCCTTCACCCTACTGGGATAACATCACTGATTCAGCAAAGGTAC ...x....x..x:x:.:..:x:..x.:.:.:..--..:x....x..:.::...x--.x:.....:.....:..:........:..:.....:.....x:.x.:............:.....xx.x....................x..:..x..x....... 33M2I19M2I106M 117/158 74.1% 162/94230402 0.0% 4/158 2.5% 116287127 73927428 +5579 chr4 + 190214555 150248249 150248248 150248392 144 GCTGGAATTACCTCCTTTCTCCTCCTCTGTGGTCTGACTTGTTTGTTTATTTGTAGGAATTAATCAGTCAAATGCTTCAGGTAAATGTTGAAGCTCGGTGTACCGCGGGACAAATCCTGAGTCACCCCTGGGTGTCAGTAAGTA chr4 + 94230402 33962195 33962194 33962329 33962195 33962194 33962329 135 GCTGTAGTT---TTCTTTCCCATTCTCATTGCTCT------TTTTTCTTTACAAAGGAGTTAATTAGCCTGATGTTACATGTGAATACTGAAGCCCGATATACAGCAGCACAGATCTTAAGCCATCCCTGGGTGTCAGTGAGTA ....x.:..---.:.....:.x.:...xx..x...------...x.:.x.x::x....:.....:..:.x:...:.x..x..:...::......:..:.:...x..:.x...:...:.:..:..:..............:.... 9M3D23M6D103M 96/135 71.1% 135/94230402 0.0% 9/135 6.7% 116286054 73928501 +8286 chr4 + 190214555 150249549 150249548 150249694 146 ATTGTTTTCTTTC---CTGTAGGATGATGCCTCCCAGGAGAATAACATGCAAGCTGAGGTGACAGGTAAACTAAAACAGCACTTTAATAATGCGCTCCCCAAACAGAACAGCACTACCACCGGGGTCTCCGTCATCATGGTGAGTGGAA chr4 + 94230402 33963431 33963430 33963579 33963431 33963430 33963579 149 ATTGTGTTTGTTCTAACATCAGGATGACACTTCCCAGGAGAATAATATGCAAGCTGAAGTAACAGGTAAACTGAAGCAGCACTTTAACAACACCCTACCCAAGCAAAATAATACATCTGCTGGGGTTTCTGTCATCATGGTAAGAGAAA .....x..:x...---.xx:.......::.:..............:...........:..:...........:..:...........:..::.x..x.....:..:..:.::..xx.::.:.....:..:...........:..x.:.. 13M3I133M 112/146 76.7% 149/94230402 0.0% 3/146 2.1% 116286118 73928437 +13542 chr4 + 190214555 150253419 150253418 150254520 1102 CATAAAGGTGAAAAAAA--AGTAAA----------GTTGATGGTGTTATCTGCATTTTGTTTGACAGTTTGATTTGACAGTTTGAGAGGCACCTCAGAGTTTCCTTCTTTACCCCGCTGAGACAGTGGGAGAGCCTGAAGCAGAATCCTGGTATTCACCACGCTGCGTCCGACCAGCGCG--------CCCCATCCTCAGCCCCTCTCACGCCTGCATG---------CTTGTCTCAG-TTTCTGATGCCGCCGTCCGGCTCTCAGCTGCTTACTGGTGTGGGTCTTT-----------TGTACCTACTCACATCCTTTCCAGCCAGCCAAGCAGGCCCCTGGAAAACTTTATTTTCAAACTTCTCAGCTTACCACACTGCCTGCCTT--TCCAGACCAACAGCTGGTGAGAGCACGGGAGGAGTCCCATAGTTCTCCTACCGATGCTGTTTCC------CACTTAGGTGAAAAGTGGCTTTTCGGAA-AGAGCAGCTTAA----GATGGTGCCTTCGTGAAGGCTTTTGTTCTTTCTCCAGCT--------GCATTTCCAAAGATGAGTTTGTATCA---GTAAGTGTAATCTCAGCCAGCCTTTGGGATAAGA---GAAGATAATTTAATGGGTGAGGCCTTGGTTTCAGGCAGGGCTGAGGTGTGGGATTACAGTTCCCATT----TTCTTGGACTTGTCCTTAGCATGCGTAAGAAAGGACAGAGCAGGGTGCATGCAGGACGGCCTCCCATGTACCCCGGGGGGCTCGCCCCAGT--------------TGCAGAGACCAGGAGAGACCATCTTGTGGTGGGAAGGGAATGCCG-AGAAGCCGCCGTCACTCGGCGCCTGCGGTGCAGACTTGAGAAGG-GACGGATTC----------AAGGGCATTGCCTTCTTCGCTGGGGGATTATGCCTTGTT-TCAGGGGGAAGTTGGGGAAGGATTTGGGTTTATTGCCTTAATTTAAGATAGACAAAACTGTTTCACTCGTGTTGCTTCTGTTGAAAGTAAGTCTAGTTTCTGTCCC-TGCTTCTCTCCTGCCTTCTGCCTCTCCCGCCGCCTGCATTGCTTCCCTCTGGCTAGGTCCAAGGCCATGGTATGTACTAACCGCACTGCCAGCCTGCCTTCTGCCACAC---ACGCCCCTGTGCT---TCTGACAGGAAGAGAAAAGGAGAAATAAC chr4 + 94230402 33964540 33964539 33965615 33964540 33964539 33965615 1076 CATAAAAATGAGAGAAGTCAGAAAATGGATTTCAGGTTCATGCTGTTGTCTGCATTTCATTTGACAGTTTGACTTGACAGTTTGAGAGGGACTTCAGAGCTTCATTCTTTATTCTGTTGAGACTATGGATAAGCCTGAAGCTGAAAACTGGTATAAAATGCAATATATGTAATAAAAGCAATTTTAATTCTAACTCTCAGCCCCTCTCCAACTTGCATGTGACTTAAGCCTATCTCAGATGTCTGACACAGCG---TAGCTTCTGGCTTCTTATTGGTGTGGTTTTTTCCCCTCAATTCTGTTACTACTGCCAACCCTTC-----AGCCAAGAAAG-------AACACGTTATT---AAATCTTTTGATTTTCCTT-TTTCCTGCTTTATTTCCTCATAACAGTTG-TGGAAGGATGGAAACAAATATTTAGTTCTG-----AATGCAGCTTCGAGTTAGTGCTGAAGGGAAAATAAACTGTTCAAAACAGTGTAATTTAATGAGAATAAAGCCCCT----AGTTTGTTACTCTTGCTCTGGTTTATTTAGAGCATT----AAAATGTAGTTATCTAAAATGTAGTTATCTTCCTGGTGATCACTTACATCAACACTTAAAAACATTCGGACAAGCACAGTATTGT----------AACTGTTGTGT---ATTGCAGTGC--ATTGCTATTGCTAGATCAGTCCACC---------------------------TGCATATTTAGTGGAATCCCTTTTAGCA--------TCACTTCATTCAAATATTGTCATCTGGACAATGCAGATAATACCATCATGTGGCAGATAAGTAAAACTGCACAGACCTACTTCA---------------GTTTTCTTGAATAGGAGACAGTTTTTCTGCCCCTTAAAAGCATACCGCTGTTAACTCATTATTGATTTTTTTTTGTCAG------------------TTTAAAACTGTTCTGTTGATCTAAATT---------TGTTGCAATTGTGTTAGTTCTGCTTAAAGTAAGTCTAGTTTCTGTCCCTTGCTTCCTTCCT-TTTTCCTCCTTTCCCCATGCCTGCATTGCTTTCCTCTGAATAGGTCCAAGGCAATGGTACGTACTAACTGCAGTG-----CTTTGTTCTGCTGCACAAAAAATACATGTGCTCCGTCTGTCACAAGGAG-AAAGGAGAAATAAC ......::...:.:..:--..x...----------...x...x....:.........::.............:................x..:......:...x.......::.:.:......x:...:x:..........x...xx.......xx.x::.:x.:::.x::.:x.:x..:--------:.:x.::.............xx:.:......---------.:.:......-.x.....::.x..x---::...::::...x....:........x.:...-----------...xx.....xx..x..:...-----.......x.:.-------..x..x.....---...::.:.::::..x..x:-:.x.....:..--.:.xxxx:.....:..-..::..x.:..:.:x.:x:x:x.......x-----:....x.:...x------::..x.:.x.....xx::..x...::..-..x.:.::....----:..::x...:::----..x:.x..::....x...::.:.--------.....----..:...x:x..:.x.x.---...:x.:.xx..:::.:x.x.x:..:x:x:..x.---:..:.:.x.:x:.:::.::x:.:x...x----------::...xx....---...:....x.--...----..x:.:..::x....x:x---------------------------.....::xx:::..xx....x.x..x.x--------..:.::..x.--------------..x.x.:xx...:x:.x......x.....::.:x.:.x..x:.:.-.x.::..xx.x...---------------.:xxx.....:x...-...:.x..:----------..::....xx.x:.x..x:..x:xx:x.x..x::..x..-....------------------...:::x:.:..x:x..:..:...:x.---------....x..x.:.....:x.....:.x.......................-......::....-::...:x...:....xx:.............:......:x............x......:........:...x..-----..x:x......::...---.x::x.x......---....x..x:.:...-.............. 17M2I6M10I145M8I31M9I10M1I14M3D32M11I21M5D11M7D11M3D19M1D11M2I16M1D30M5D12M6I28M1I12M4I12M4D23M8I5M4D17M3I34M3I28M10D11M3D10M2D3M4I18M27D28M8D10M14I45M1I14M15D15M1I9M10I39M1I4M18D27M9D48M1I12M1D75M5D16M3I13M3I14M1D14M 638/970 65.8% 1076/94230402 0.0% 238/970 24.5% 116288879 73925676 +6395 chr4 + 190214555 150255992 150255991 150256194 203 TGTGTTGTCTCTG-CTGTTTCCTCCTCAGAACACGGCTCTAGATAAGGAGGGGCAGATTTTCTGCAGCAAGCACTGTCAAGACAGCGGCAGGCCTGGGATGGAGCCCATCTCTCCAGTTCCTCCCTCAGTGGAGGAGATCCCTGTGCCTGGGGAAGCAGTCCCGGCCCCCACCCCTCCGGAATC--TCCCACCCCCCACCCTCCTC chr4 + 94230402 33967642 33967641 33967842 33967642 33967641 33967842 201 TGGGTTTTTTTTGTCTGTTT-----TTAGAACACAGCTCTAGATAAAGAGAGTCAGATTTTCTGCAGCAAGCGCTGTCAGGACTCCGGTAGAGCTGGAATGGAGAAAACTTCTGCAATTACTGCTGCAGCTGCTGACCCGCGCGCAGCTGGGTCCGAGACCCTCCTCCCTGCTGCTTCTGAGCCAGTCAGATCTCCCACACTCCCC ..x...x.:.:..-......-----.:.......:...........:...:.x...................:......:...xx...:..:x....:......xxx.::...x..:..x..x.:x...:x.xx..xx:x.x:.::x.....xxx.x:::..:xx:...::.:x..:.x..::.--..xx.:.:.....x....:. 13M1I6M5D159M2I20M 132/198 66.7% 201/94230402 0.0% 8/198 4.0% 116288350 73926205 +33132 chr4 + 190214555 150264482 150264481 150265826 1345 AAAATTTAGGAGCAAAAAAGGCAT---TTCCAACAA----TTCAATTACAGATGCCATTTTATTCAGCTTTTTCTGTCAAACTGAATTGT-TCATTCCAAATCCTTGCTTTTAGAGA--AGAGCTGAGTGTGTA-GGAAAAAAAGAGGGACCACTTGAA-----------------GTCTGTTGCAAGAGAAATAGAGA---------TCAA-----AGTTCACAACATACAAAGAATTTATTT--ATGCAATACAGGC-------------------CTTTTCTCAAATATTTTTCACAGAATTCCACACAGTAATCTACTAGAAAAGTAGAATTATACACCACCAAATAACATTGTTTCGTTTCTTAGTACAAATTGCTAATC---------AAAAGGAAGG--------------TGGAGATGA------TAGTTT----AATAACAAATAGTAAAACAGGTGTTGCTG----------AATACAGCACCCGGTAGCCTCTAT----TTGCAAA-------CCCGGGGAGGGAAGGGGGTGCCCCAACAAAACAAC-----------------AGTGGCTCCGCCTCA--------TTGTC---------CAGGCACAGGCAAACCGCAGTAGTGAGCTTTGGTACTTGCATTTACTTTAAAA--------GAAAAACAAA------------------------------------TGTTGTGAGCTCAAG----------AGCATTTCCATCATTTCG--------------TTTTGTTGTGCTATGAAGATGACAGATCAGGAAAAAATGGTAACTATTTCACACTTGCTATAAATTAGATTCC----TTGTGCTAACCACACAATAAAATAGCCTCCCCCAAACCA----TACTTTTCTAGGTCTAAA-ACATGCTTGAAGAACAATATTGATAGACAGACTTAATTGAGATGTTTTAAATTACATTTACCATAATTTAAACATTACTATTTAAATCCCAGAAATATTAGTGCTGAAGAAGCACAGTTGTTTGGAAAAATACAGGACCCAAATTACAGCA-------------TCAAATTTTCCTATTCCAATATTGTAACCCACTTCCCCACTGTGAAAATCCTAT--TTCTCAAGCTTGTAGATGCAT---------GGGAAATGTTCTTCATAATATTATAGCTGGAATAAGTGGTTTACTTG-CTCCACTGTATGTTTC-----CATA-ATTGGTGAAAATAGACTTCTCATTATGACTAAAAATATAGATTTTTTAAAACTACAGAACCCAGCAGCCAGTTTTCTGCTTTGCTAATCC-CCCCCAAAAAAGTCAAGCAAAGACTACAAAAATAGCAATTATTAATAACTTTAAAAAATATTTTGCTTCTTTGAGCAAATTTAAGTTACATTCAGATGTGGTA-----------GAAGAG-AATGATGCTCCAGGTACTTC----TGCTCATCCTAGGGGCAGAGTTGATGT-ACAGCTGTCACC-------------------------------ATCAGTAGCGGGTTTGGTATTCATGATGCCACCGGTTAAAGTCGTTGTAAAATAGCACAATGCTTCCTGAAGCCATGCCAGAAATGATGCACCTAGGAGAAGCACA chr4 + 94230402 33975673 33975672 33977287 33975673 33975672 33977287 1615 AAAATTGAGCCACAAGAACACAATACATTCCAATGAAGCTCTCAATTACAAATGCAATTTTATTTAATTTCTTCACTCAAACTGAATTTTCTCATTCCAAATCTTTACTTAAAGAGATAGTAGCTAAATGCTTGCTTAGAAAAACAGGAACTGCTCTAGTAGGCAGCTAGAGAAATGTATGTATCGATACAGATAGGGAATGTAAATTTCAACTGATAGATCACAACATACAAAGAAGATATTTTTATGCAATACAGACTTACAAAACAATAACAGTTCTTTTCACAAATATTTT-CACAGAGTTCTGCACAGCAATCTTGTAGAAAAGTAGATTTGTGCAACACCAAAATAACTTATT--GTTCCTTAATATAAATTATTTTTTTCATTTCCTAAAAGAAAGAGAATTTCATAAGATTGGACAGGACCTGACTAGTTTTGGTGATAGCAAA--ATATAAAAGATGTTCCTGCCATATACAGAAAAAGGAACACGGTGTGTGCTACAGTATTGCAGGGGTCAGTTCTGGACAAACAAGAAGAGCAACCTGCAAGTCTACTGCTTCTGCTGCTGTAGAGAGGCTGTGCACCAGCAAACATTTGTCTTTCTAGTGCTTTCACAGTCAGACAGCAGAAGTGTGCTTTGGTAAATGCACCTATTTAAAAAAAGAAAAAGAAAAACAAAAACCACACACAAAAAAACCCTGCTTCTGTGGGTTTCTGATTGGAGCTTAAGGCTCTCAAATAGCCTTCC--TGATTTTGAGGAACAATCTACATTTTGGTGTGCTTTGAAG--GAGATGCCAGGTAAAAACTGGAAGGATT-CACACTCGATGCAACACAAACTCTGTTGCTCTCTTAACTGCACGTTAACATA----CGACTAAAAAAGAACTAATTGTCTAGGCCTAGGTACATGCCTGAATATTAACATTGATGGAAA---CCATTTGCAAAGTTTAACATTACATTAACCATAATTTAAATATTACTATT-GATTTTCAGAAATGTCAGTGCTGATGTAGTACAATCATTTGGAAAAGTACAAGAC--AAAGTATAGGACAGATAGTACAGATTAAAACTCCCCA-------ATCGTAATTCATTTCCATTATGTTAAAATCATATATTCTTCAAAGGTATAGATAAAGCTTCAGGTGGAAAAATCTGTTTCTTCATGACACAGCTAGAACGTGAGTTTTAACTGACTTTATTTTAGGTTTCTTTTACATACAGGGATCAAAATAGACTTCTCATTGTGACTAAAAATATAGATTTTT---AACTACAGAACCCAGCAGCCATTTTTCTGCTTCGCCGCCCTTCCCCCAAAAAAGTCAAGCAAAGTCTACAAAAATAGCGATTA------ACTTTAAAAAATAGGTTGCTTCTCCCAGCAAATTTAAGTTACATTCAGATAGGATATAGCTATTTATAAGGAGCAATGTTGTGACAGG-ACACCAAGGGAGGCATGCTATGGCCAGTCTCATTCCGACAACAGCCACCCACATCAGTGCTAACTGTGGTCTCTGCGAAGATCAGTATCTGGTTTGATATTCATGATGCCAACGATTGAAGTCATTGTAGAAAACCACTATGCTCCCCGATGCCATCCCGGTCAGTATGCACCT-GCGGAAACACA ......x..xx:...:..x:xx..---......::.----:.........:....x........:.::..:...xx............x.-............:..:...xx.....--:x....:.:..:x.:-xx.:.....x...:..::..:x.:-----------------..x...xx.:.x.x.:....:..---------....-----..x.................xx.....--...........:.-------------------......x..........-......:...::.....:.....xx............x..:.:..x.......xx.xx..:..--...:....:..:.....::.xx.:---------.....:...:--------------....x.x..------......----:...:....--:..x..x..:....x...----------..x.x:.x..x....:xx:x...:----.....::-------:.:..:x.::x...::.:xxxx..x:...:x.x..-----------------..x....x:..x:..--------.....---------.xxx.....x..:..x....x....x.........xx....::..:..x....--------..........------------------------------------..x.xx.....:...----------...x..:.--.x....:.--------------.....x......x.....--..x.x::....x.....:x.x..xx...-......:.x.::..xx:.:.:..:----:.x.x:....::...:x...x...----.xx.:...xx.----..x..x......:...::-......:....x.x:..:......:..x.---::.x...x:.x....x.x........x.............:.........-:.x.::.......:.:........x.x..:...:.::.........:....:...--...x..:..x.-------------.:...x:.:..:.-------..:....::..:....x:xx...x......x...--.::....:xx.:.....:x.x---------.::....x.x:...x.x..:x:.:....:...::x.x.x....x:..-..::.:.x..x.....-----....-.xx.:.x.................:.....................---.....................x..........:..::x:.:-......................x.............:....------.............xx........::x........................:x.:..-----------:.:...-....x..:xx....-..x:.----x:xx...x...x..x...xx.::x.x:-...:.x.:....-------------------------------.......x.x......:..............x..:..:.....:.....:..x.x...x.....:..:..x.....x..:.xx.xx........-.x:...:.... 24M3I9M4I50M1I26M2I15M1I24M17I23M9I4M5I27M2I13M19I17M1D63M2D24M9I10M14I9M6I6M4I9M2D18M10I24M4I7M7I35M17I15M8I5M9I53M8I10M36I15M10I8M2D8M14I18M2D28M1D24M4I24M4D11M4I18M1I29M3D50M1D55M2D11M13I13M7D34M2I21M9I47M1I16M5I4M1I46M3D41M1I41M6D56M11I6M1I14M1D5M4I27M1I12M31I94M1D11M 966/1307 73.9% 1615/94230402 0.0% 346/1307 26.5% 116288809 73925746 +3618 chr4 + 190214555 150267926 150267925 150268002 77 AGTGG-GCACCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....-....x....:.:...........:.........x.xx.x...x..........::.:.:x:xx:..:..:.. 5M1I72M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% 74234726 NA +10852 chr4 + 190214555 150277807 150277806 150278072 266 TGCAGTTTTTGAAACCCCTATTTGTAGCCCATGATTCCAGTGTTACCTCTGGTCGTAAGACAGCGCCATGGCCCGGATTCCAGCGTCACATCCTGGATAGGCAAAGAGCTGCTTGAGGTCCGACACCTGCCGGACCACGACCACTCCTCTGTCTCCTCCTGTGAGCAGGTACTGCCCATCTCGGCTCAGCTGGATGGCCTGTGAGA----CACAGCAACATTC----AGTAGAAATGTGGTTCTAGGAAACTTTCGGCCCCCACCCTGTTTTTG chr4 + 94230402 33979414 33979413 33979677 33979414 33979413 33979677 264 TGTAGTCTCTGAAATTCTTGT--AAAGACCA-GACTTTGCTCTAACCTTTGGTCATATGACAGGGCCATAGATCGGATTCCAGCATCACAGCCTGGGTAAGCAAAAAGCTTCTTCAGGTCCCACATCTGCCACACCATGACAACTCCATTGTCTCCACCTGTAAGCAGATACTGTCCATCTCTACTCAGCTGGATTGCCTGAGGGAAAATCACATGGATATTTGTCAGGTAAATATGAGTTTCT-------TTTCTTCCTCCTCTTACTTTTCG ..:...:.:.....::.:.:.--:x..x...-..:.:::x.x.x....:.....:..x.....x.....:.x:...........:.....x.....:..:.....:....x...x......x...:.....:x....:...x.....x:.......x.....:.....:.....:.......x:...........x.....x.:..----....xx:.:...:----:...:.x...x.x....-------....xx..:..x.::xx....:. 21M2D8M1D174M4I13M4I17M7D23M 189/256 73.8% 264/94230402 0.0% 18/256 7.0% 116298393 73916162 +28071 chr4 + 190214555 150279809 150279808 150281257 1449 AATGGCAATCTC-TAGGGGTGTCTGGGAACTGCAGTGGAGACTAGGACAAACAATTATTTGCTACACTTATAAAATTCAGCTGATGAAAATCCATTAACCTTATGGTTGTAGTTCATTTGAATTTGATACTTGAAGCTTTTTACTGGATAAGTGTTATACTAAAA-------CAAAACCACTGATCTTTAATTCTTTGTTCTAGTAAAGAATCTCTAATCC--TGCTTCCATCTGA------AATTAAGTAAAACCTGGGCTTTAGGGACTATACAGTCATCAGCATTCAAAACATTTTAATGAATCAGATGCCTCCCAAGGTGAAAAAAGATT----------------------------------TCGCTGGCCTCTTTCAG-------------------------GAGAGGCCAAATTC-CTCTGGCGGCA----AGAGCCAGGG---------TAACATTTAGCAAGCAGCA--------------------------------------------------------------CCTGATCTCCC-------------ACTCAAATTCTGACAGGC------------CGCCTCCGCATCCAG-------------GTTGGGTTGTGACT----AGAGGTTTTCAGAGGGC-----CCCAGACACATGTTAA----------TCTCA--------TCCCCTGAAATCCTGAGTGCTCTGGAC-AATGCCGTGGCTGCACGGGTTTT----AAGGAGGT--------------------------AGTAGCAG------------GCCACAGCAATCTGCTGGGGATGACCACATTCTAAAACAGCCTCAGG-AAGGGAAAACAAATGCATTCCCCTGGGTG-AATGGTGGTTCTCCCTTGTTTAGGACAAAATAACTTTGCTGCTCTGTACAGGCTGCCTCCTTAAATATCAGCTATTCATAAAGACATCTCAACACTGTCTAGTTGATGGACTGTGATATGCTGCTAACCAAAATGCCACAGAGCAATCTGGCATCTAAAATAAAAATAGGTGGGAAGT---------GCAGAGCTTCCCCAGGCTGCCTG-------CCTGCAGGGTTCTTGGTATTTCACAG----------AAACTTAATTTCTGGTCTGAGCTGATGACTAATTTGTTTCCATGGTGTCCAT----TCCTTATATG--GGCTCAGATTGAGGAAGG---------AGCTGGAGATTCTGCCCTGTGGTGTCTTGGATTCCCAGCCTGTGGCTTCCTTCCTCGCCTCCCGAG--GTAGTGAGCTGTGAAAGTATCAG----TCTCTGGAG-CTGTGGGCAGGTATTGCTCATTTTAGGCAAGCTCGCTTTAATCACACAGTTGCCACTTGCAAGTTAGCATGATAAAGTGCAGGAGTGCTGGG--AAAAAGGCAATGGATTGTTTAAGCCTAAAATCC-AGTGGGAAATATTAAAGAGGGAAAAAGCAATGGCTACAGGGCAGAGAGGAGAAGCATGTGTGTATGAA----TGGTCTGCAGAAAGC----CTCCCACTGCTGCCTCAAGGAAC-TTCCCAGAGCCCCTGGTACTAACTGAAATGCCACAGAAATTGCTTCAGTCAGCCAGGGATCTCAAATTATTTTACAGATTTATTAGCGTAGCTGACAATATAATCGCAACTCAAAGTGACAGATTATCCACATTATTATTGTAAAGAAAAGAGGAAAAGAAAATCCTCTGATGTGTACTTGGTTTA chr4 + 94230402 33982418 33982417 33984134 33982418 33982417 33984134 1717 AATGGCAATCTCCTAAGGGTATTTTCAAACTGAAATGAAGACCATGACAAATAATTATTTGCTACACTTATAAAATTCAGCTGATGAAAATCCATTAACCTTCTGGTCATGGTTCACTTGAATTTTATACTTGAGGC-TTTTACTGAAGAAATGCTATATTAAAAGGCAAATTAAAGCCATTAATCTTTAACTC----TTCCACTA---CCTGTATAATGCAGTGGTTTCTTGTGATCTTTTGATTAAATAAAGTATAGGCTTTGA-------ACCTTTACTAATACCTATGTAATTTTACTAAGTCATTGGCTTGTCAGGAAGACAAGATGTTGaattatttatttttattgtttattaataaataGCCACTTGCCAGCCTCAGCATATATATGAATGAAGGAATGAATGAAAGAAAAAGGTCACCCTGTCAACATTTCAGTTTCATGGCATGCCCTTCAAGATTTAACAAACGAAAGGATGCTTTTACTCCCAGGTACTCCAACTGGCATAGAAGAAGGCATGAATCAATTTTACTGTTCTGCTTTTCCCTAGCGCCGTTTAACTGGGGTTCTGCTAGGTATGAAACTGAAACGCCTCTGCAACTAATCACTCTCAAAACATGAGGTTCAGACTCTCAAATAATCCCCAAAGCACACAATCTCAGCAACGTTCTAAAAGCAGCATTTCTCACTTATATTTCCTTGGAAAGTCTCAAAACTTTGCACAAATCCTTTAACATCTCAGATTTTTTGAAAGGCAGTGCTTTGTGAAAAGGCAGAGCTGACACAGTGACAGTGCTGGCATACAGCAGCAGAAGTCTTGTGGGCACTTCCACATTTCAAAACAGACTCAGGAAAAAGAAAATAAATTGGTTCCTCTGGGTGAAACAGCACACAGCCTTTGTTTAAGGTAAAATAACTTTAACTCTCAGAACAAGCAGACTATTTAGAGTTAAGTTATTCATTAAGATATCTAAACATTACATGGTAGATGTACTGCGATATG-------CCTAAGCTCCACTGAGCAATACAGTGTTTAAAACAAAAACAGGTGGAAGACATTGATTAGACCAAATTTCCCCAGAGCATCTGAAATTTTTCTAGCAGTTTCCTGG-----CACAGGAATATGGGAAAATTAGAATGTTGTTCCAACATCTTTATTGA-ATGCTGCTATTTTGTCAATAACATTCTGAAATGCAAGTCCATAATGACACAGGCAGATATAAATATAAGAATTTTGCTTTA--------CAGATTCAACACTTATGACCTTTTCCTTCCCTTTTCTATCCTTTTTGAGGAAAAAAAAAAATAGTGTTTCATTGCAGCCCATGGTTAGGGACTATTCATTTTAAATGCCCCTACTTTAATTATGCTGTTGCCACTTGCCTTCTAACATGATATAGAGCAGAAGCATTGGGAAAAAAAGGCTTTAGATTGTTTGAGTATAAAGCCCAAGTGGGACCACTGGGAGAGAGAGAAAACAA----AACAAAACAAAAACAACCCAC-TGTACATATGTAACTCTGGCCAACAGAGAGCAGAACTTCCA---TTGCCTCCAGCAACATTCCCAAAGCTGTGGGTACTGACTGAAACACTACAGAAATTGTTTTAGGCAGCGAGGGATTCTGAGATATTTTACAGATTTCCTTCCCTGACTGACAACATAATCACAACCCAAAGTGGCAGATTATCAACGTTACTATTGTAAA---------AAGAGAAAACATTGTGATATGTACTTGCTTTA ............-..:....:.:.xx:.....x.:..:....:.x......:..................................................x....::.:.....:........x........:..-........:.x..:..:....:.....-------:...:...:.:........:..----...:.x..---xx.x.x....x.--..x..:.x.x...------:.....:....::x.:......::-------..xx.:.::.::.:::.x:xx......x.:.:...xxx..:.x:..:.:x..x..:.x:..----------------------------------:.:..x...xx::....-------------------------..:..:xx..:x..-.:...x.::..----..xx:..x..---------:..x.....:...:.::x.--------------------------------------------------------------:...x.:.:..-------------...x:::.....x:...:------------......:...x.:.:-------------:.x:....xx....----.:x::.:::..:..x:.-----.:...xx..:.x:...----------.....--------...::x....x:..x.:x:..:..x..-...x.:x.::.xx.x.:.:....----....x:..--------------------------...::...------------..x:...x.:...xx....x.:xx.......::.......x......-..::.....:....xx:....:.......-..::.::xx:xx..:.......:.::...........:x:x...x.x...:..x.x..x:...:.xx.x..:.......x....:....x....:.::x.:..x....x....:......-------..x..::x....x.......x::.::.:.....:.....:......:.:::---------:.x:.::........:x:::...-------:..:xx:.x...:...-----.....----------...:.x:.x.x:..x..::.xx.xx.x.:.:.-x..:.x.:..xx....x..----.:..x.x...--:.::..x.x...x:x...---------.xx.::::...:...::.:--------::.....xxx:.:.:..:.:.::.:.:..x.:.::.x.x--x.xx....xx:x:...:x.x:..----..x:..x..-.::...x:...x.:.::........::::xx.:::.......:.::.x............xxx:..:.......x..x....:..:::....--........xx.:........:..:x....::..-.......xxxx.x::....:..:...:...----x...:::..:.:.x:.xxx:.-...:::....x.----...:.x:....:...----..:...---:......x..x...-......:...:x:x......:.......::.:..........:..:..x....x......::::.:x..............x:.xx.x.::.......:......:....:.......:.........x..:...:.........---------..:......:x:.x....:........x.... 12M1I124M1D27M7I22M4D8M3D12M2I13M6I24M7D61M34I17M25I14M1I11M4I10M9I19M62I11M13I18M12I15M13I14M4I17M5I16M10I5M8I27M1I23M4I8M26I8M12I47M1I29M1I120M7D51M9I23M7I16M5D5M10I32M1D19M4I10M2I18M9I19M8D39M2I23M4I9M1I92M2I33M1I30M4D21M1D12M4I15M4I6M3D14M1I145M9D32M 942/1396 67.5% 1717/94230402 0.0% 374/1396 26.8% 116297391 73917164 +14274 chr4 + 190214555 150282443 150282442 150282683 241 CACTCACTCTTATGTTATCATCTGTTTCCATCGTGGCCTGGAGTTTTCCATTCACACTGAATGTACAGAAGAGGCCGTTTTCATAGAATATGACACAATGACCCTCTCTTGAAGCCTGAATGAGTTTTGGTTTCAGGCAGT------------------TTTCAGGACCCTCCAAGGTCCTCAACAAGTCTCCATTCATGGAATGTATGAGACATGGTCCTTCTGAGAAGAGAGGAGAAATAAAAGGCAAAATTATTGA chr4 + 94230402 33985737 33985736 33985990 33985737 33985736 33985990 254 CACTTACCCTGATCTTGTCATCCGTTTCCATAGTGGCTTGAAGTCTCCCATTCACACTGAATACACAAAAAAGGCCATTTTCATAATATATGACACATTGGCCTTCCCTTGAAGCTTGAATAAGTTTCGGTCTCAGGCAATTTTCAGGACCTTCTAATGTTTCAGGACCTTCTAATGTCCTCAGCAAATCTCCATTCATAGAATGTATGAGACATGGTCCTTCT-----GTGAGAAAGAATAAAAACTTGAGACATTGA ....:..:..x..x..:.....:........x.....:..:...:.:...............::...:..:.....:........:x..........x..:..:..:........:.....:.....:...:.......:.------------------..........:..:..x.......:...:...........:........................-----.x...:.::.......:x:x:.:x:..... 141M18I65M5D30M 191/236 80.9% 254/94230402 0.0% 23/236 9.7% 116296706 73917849 +7249 chr4 + 190214555 150285889 150285888 150286060 172 ACAGCAAGAAATG--CATCCATTTTGTGAAGGTACCACAGGTTTACCTTGTGAACCACTCAACACCAGGCCTAGCTCCGCACACACCGCAGCACATGTGACCTCATAGTCATGGCCGGTCAAAATGGCCCGAGGAGCAGCAGTCTCACCTTTAGGAAAAAACAGATAAAAAGAA chr4 + 94230402 33987176 33987175 33987333 33987176 33987175 33987333 158 ACAGAAAGAAATGGACATCAGCTTC----------------CTTACCTTTTGAACCACTTATTACTAAGCCAAGCTCAGCACAAATGGTAGCACAGGTGATCTCATAGTCATGTCCTGTCAAAATGGCTCGAGGAGTTGCAAAATCACCTTCAGTGGAAAAACAATAAAAGCAA ....x........--....x::..:----------------:.......x.........:.x:..:.:...x.....x.....x.:x.:......x....:............x..x...........:.......:x...:xx.......:..x::....xx:......:x.. 13M2I10M16D133M 119/156 76.3% 158/94230402 0.0% 18/156 11.5% 116298713 73915842 +22231 chr4 + 190214555 150290327 150290326 150290859 533 TTCTGAAAAATATCAAGTTAATTCTTCTGATAAAAATTTGCAATAGTTAAGGGATACAAAAAGTCTTTACCTTTGCTTTCTGAGATAGTAGGATCT-CCCAAAGGCTAGACCATAAAGCAGAACAGATTCCCTTAAGAACCTTTTAAAGTCTTACTGCTTGAAAA-ATTGTCATGGCCTTCAATAATGCTGAGAGAAAAATTTATCTTGCTGCTAGTTTAAGGGACTACATTTCAAACTCTTCTTAAAGAAAAATAAAAAGAGAAAGAGGACAGACTTCTAGGACTGCTTTGAAAAGCTTGAGCAATTACTTCAAAGGAAAGGGTGTCTTTGTCCAGAGAGCACGTTTATGACTACTGATGCAAATCCTAACCAAAGGCTGAAAAGGATACCCAGTGCATCTTTATGGATGGCCTTAAAGGAAGATGAACAAGTCAAATGAGATTAAAGACAGCCCAAATTCTGCTGCAAATA-CCAGGGCACATCAGGTTTTACAGAGGCACTTCTCTCAGTACGTAATACTAGATATCAATACC chr4 + 94230402 33989597 33989596 33990103 33989597 33989596 33990103 507 TCCTGTGAAAAGTCAGGCTGACTCCTTTGATAAGAATGTCAAGCATTCAGGGGTTTCCAAG--------CCTCTGATTTTCCAAATAATGGGGTCAACTTAAAAGCTGG-TCGTAGAGCAGAACAGATTTCTTTAA-AAGCTTTTAAACTGTTACTGCTTCAGAAGATTGTCATGGTTTTCAATAATGCGAAGAGAAAATTTTATTTTGTTGCTGGTTTAAGGGGCACCACTTCAAACTTTTCC----GAATTGTTTTAGGGGAA------CAGGCTTGCAGACCT--TTTGAAAAGCTGGGGAAGTGACTTCAAAGGGAAAAGAGTCTTTGTCCGTTAAGCAGGTTTACGACCACTGATGCAAACCCTAACTAAGGACTGAAAAGAATACTCAGTGCATCTTTATGGAGATCCTT-AAGGAAGATGAACAAGTCAAATGAGATTAAAGATAGTTCAAATCCTAGCACTAATATCCAAGACACAACA-GCTTTACAGATGTGCCTTTCTCAGC-----ATAGTATATAAAAATATC .:...x:...x:...:.:.:.:..:.:......:...x.xx.::.x.:.:...x.x.x..:--------...:..x...::x.:...:.:..:..x-.::...:...:.-:.:..:.............:.:....-..x........x.x.........x.:..-..........::...........x:........x.....:...:....:.........:.xx..:........:...:----...xx:.xxx.:.:...------...:...x:..:x..--...........x.:.x.:.x..........:..::.x..........:xx:....x.....:...:...........:......:..:.:........:....:.................x:x....-.................................:..::.....:..:x::.x....-...:.:....x..-.:........x.::.:.:......:-----...x..x...xx....:. 61M8D27M1I12M1D26M1D28M1I78M4D17M6D15M2D128M1D56M1I13M1D25M5D18M 380/504 75.4% 507/94230402 0.0% 32/504 6.3% 116300730 73913825 +20190 chr4 + 190214555 150297055 150297054 150297482 428 AGACAACTTTCTTTGGCATGGCACTATTAAAAAGGTCTACATATGAAGATACT---------CAATCTGAGGGTATAAATCATCAATTCTTCTGTTCTCATAT--------TTATATGGCTATAACCTATGGGCTGAATGGTACAGTCATTTTTCTCTGCAACCAAACAAGGTAAATAAATGTGATATATTGGCATATCACCCCACCACTCTGCATATGGTGCACATTAAGGTTGTATTCATTTGCCATATGAATATAATTCCTTTTTACCACATCTACTATTAGTTACAAGCAGTAAATACAGAGTTGTTTTG-CTGGAACTTGAGGGCCTGCATTGCATCATGGAGCACTAAACATCCTGGACCTTCTGGAGAATTTCATAGACATACTTTTAATGTCACCTGAACTTGAACACTGCC-AACATACCATTTGAAAACGCTTCTTG chr4 + 94230402 33993148 33993147 33993574 33993148 33993147 33993574 427 AAACAATTTTTTAAAACAT-------TTAAGCTGGTC-----ATAAAGATTCTAATATATGACAGTCT-AGACTATAAAGTATTATTTCTTCTGCATTACTCTGTTTTGTCTTATTTGGGACAGACTTA------GAATTGAATAGTCATTTTTCCCGGCAACCAAACAAGGTAAATAAATGTGATATATTAGTACATCACTCCACCACCATGCATATGGTGCACATTAAGGTTGTATTCATTTACCATATGAATATAATTCC-TTTTACCACATCAACTATTAGTTACAAGTTGTAAATATAGCATTGTTTTTCCTGGAACGTGAAGGTCTGCATTACATCATGAAGCACTAAATATCCTTATCCTTCTGGAGAATTTCATGTATATAGTTTTAGTGACACCTGAAGCTGGATACTGCCAAAAAAACAACATCAAAACTCTCTCTG .:....:...:.xx::...-------....:xx....-----..:.....x..---------..:...-..:x......x:..:.x........:x:.xx.x.--------....x...xxxx:..:..------....x.x.:...........:.x.................................:.:.:.....:.......:x.................................:..................-............x...............:x.......:..x:.......x-.......x...:..:.......:.......:.........:.....x:x..................:x.:...x.....:..x........x:..:.:......-..x.x..x.:x.x.....x..:::.. 19M7D11M5D11M9I6M1D34M8I18M6D128M1D50M1I105M1I26M 328/408 80.4% 427/94230402 0.0% 39/408 9.6% 116303907 73910648 +3048 chr4 + 190214555 150299479 150299478 150299522 44 TACACTTGATCTTAGCCAAAAGGCTGAGAAGCGATGTATTTATA chr4 + 94230402 37937488 37937487 37937531 37937488 37937487 37937531 44 TACACTTGATCTTAGCCAAAAGGACGAGAAGCAATGGAATAATA .......................x:.......:...x.x.x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 112361991 77852564 +11854 chr4 + 190214555 150302608 150302607 150302824 217 AAATGAGTCATACTTACTGCCTGGGTTATCTCCAATCCCACTGCATTTTCCATTCCAATACCACAGCAAAAGAGTTGCATCACGTGACCCTGAGAGAATGTAGCAATTTCCCCCAATATATGACTCAGAACGAGCAAGGCAAGTGACGACATCCCAATGGCCAAACACCACTTGGATCAATCTTCCTGTAAT--GCAAAACAATTTTCTTTAAAAATGC chr4 + 94230402 34002809 34002808 34003027 34002809 34002808 34003027 219 AAATGGGTTTTTCTTACCTCTTGGATTATCACCAACGATATTGGTTTTGCCATTCCAGTACCAGAGTAGCAATGTTGCATCACGTGACCCTGACAGAATGTAACAATTTCCTCCAATATACGACTCAGAACGAGCAAGACAGGTGACGACATCCCAATGTCCAAATATTACTTGCATCAGTTTACCTGAAACAAATAAAATCAACTGTTTCAAAAGTAC .....:..:x.x.....:x.:...:.....x....:xx:.:..xx...x........:.....x..:.:x.:x....................x........:........:........:.................:..:.................x.....:.::.....x....:.:.x....x..:--::....:x.x:.x:..:....:.:. 192M2I25M 166/217 76.5% 219/94230402 0.0% 2/217 0.9% 116299799 73914756 +18471 chr4 + 190214555 150305742 150305741 150306563 822 TTCTTTACAATTTATACTTTG--GGCTCAACTCTGGAAAACATTATTTTTTTAAGTTTACTTTTTC-----CTGTTCTGGCA---GCCTTCCTCAGCAATATTTGTTATTGCTATAAGGTTGAGGTTCACTCC-TCCTAAATAAATCACAGCATATAAATACCTGCTGCTCTTT-----------TTGGTAAATTATTTTCTGATAATCTTATAAGTGTTCCTCAACCTTTATTTTTTGTTTCCTTTAATACCAGTCCACCTCTCCACACACTAATATCAAATATTACCACAAGCACTAGAATATCCCTTTTTTGACAGAACAAATTTTCTAGTTAATGTTTTATTTGACAGCTGTGCTACAAAT------AAAAAAATTCAAGCTCAGGACTCTGCACCACTGAATCTAAAATGTGGCCTGAAAATAATTCCGACTGCCAGGGGAAGGTTTTATTGTTGCCTCTGCTGTTCTGGTTGTGGCCCGAAAACATGATTTATGTTTAAAGAATTTCCTGTTACAATCCATGTTTCTCCTCCCTCCTCCCCAATCTAATAAGAGA-AGGATTTTTTTTTTTGGCTTGTGTGCTAAAATATAATTGAATTTAACACTTGTGTTAGCTTTGCCATTATATATTACTGATCATATGA---TTTTCCCTTGATTCTGTGCTAAACTTAAGAAAAAATATT------TAATATTCCTATTGTTGTAAAATCACAGACACATATTTACCTTAACTGAAATTATTTTAAATAAAACTAGCATCAGAGTTTTTATACAAGATATTAAGAAAGACACCAGGACTATCGTT----TGAGATTTTTTTTATA---CAACTTTTCTGGTAAGTATAAATATTT chr4 + 94230402 34005824 34005823 34006642 34005824 34005823 34006642 819 TTCTCTTCCAGTTATACTCTACAGGTTCAATTCTAGAAAACATT----TTTCAAGTCTATTTGTTTGACAGTTGTTCATGTATTTGCCCTTGTTAGGTTTACTT--TGTTATCAGGGAGCTAAGGCTCAGTCAATTCCATCAAAATCATCAAAGTAAGAAACATGCTTATGTTTATTTTTTCGTATTAGTAACATAAAATC-ATTAATCTCATACAACTTTCTCAAC-TTTCTTTTTACTCTATTTTAAAACGAGCTATCCTCTCTACATAGTAATATCAAACATAAGCACATGCACTCAGATATTCCTTTTTGAGAAAACAAAATTTTCTAGTTAATGTTTTATTCAATAGCTGTGCTACAAATAATTAAAAGAAAAATAAGACCCAAGTCTCCGTGCTACTGAACCTCAAAAGCTGTCTAGAAATCATTCCTGCTGCTGAAGGAAGTTTTTATTG-TGCTTCTGC---------TGTGGTGAGAACCTTTGGTTTATGAAAAAGGTATTTCCTGTTAAAAACAAAAG------------CCCTGAATTCTATTAAGAAAGAGGACCTCTTTTTGTG---TAAGAGCTAAAACATAATTGAATTCAACACTTGTGATAAC-TTGCTATTATGCCTTATTGATTCTATCACCTTTTTCCTTTGCTGTTCTGC-AGATTTCAGAGTAAGCATTTTACCATTATATTCTCATTTT-----AATTCCAAGCAAA-ATGAACTACAACTGAATTTATGAT-ACTTAATCTACAGATAGAATTGCTATACAA------ACAGGAGACACATAGAATACTAATTTGCTGATACTTTCTTGACAATTTTATTTTGCTTGTAATCATAATTAGTT ....:.x.x.x.......:.:--..:....:...:.........----...:....:..:..x..:-----:.....xx.:.---...:.:x.:..xxx..:..--.:..:::.x:::.:.:...:...x..x-.:.:.xxx......:x:x.xxx.:.x..x....xx.x...-----------..:....xx..xxx..-:x......:...x:xx..:......-...x.....xx.:.x:.....x..x..::xx......:...:.x..........:..x.x....x.....x::....:.......x::x.:.xx........................::.:...............------..:....x.x.::.:..:.x...:.::.:......:..x...x.:x.:..::....x.....x:....::::.....x........-...:.....---------.....:xx...xx:x..:......xxx..:.x...........x..x.x.x:x------------.:.:xx.x....x.....:.-....::.:.....x..---.:x.x.......:...........:..........x..:.-....:.....::x...:....:x...x.---......:...x.x:.x...-.:.:..x...:x..::...------.x......::...x.-----...:x..::..x.-..xx..:x:.......x....xx.-.x.x..x...xx:x:...:..x:.......------.x:::......xx:..x..:::x.----...x.:...:..x.:.---:x.:...x..x....x:....x..x.. 21M2I21M4D18M5I11M3I19M2D27M1I40M11I16M1D25M1D137M6I86M1D9M9D53M12D20M1I16M3D40M1D28M3I19M1D19M6I15M5D13M1D24M1D30M6D24M4I16M3I27M 530/774 68.5% 819/94230402 0.0% 93/774 12.0% 116299918 73914637 +12249 chr4 + 190214555 150310224 150310223 150310418 195 ATTACCTGTGTCTGTAGAATAGACTCTGAAACTTTTATCCCAGAAGCCACAGACGAGAATATAGCGGTTGTCTGAAGTGATGACAAAGCACTGGGAATGCACTTGAATACTTTGGTCTAAAAGGTCAGTGATTTGCCTCCTGTGCATTCCTGTATTGCTGGCTGTAAGAATAGGGAGGAAAAACAACTATTAAAT chr4 + 94230402 34008228 34008227 34008418 34008228 34008227 34008418 191 ATTACCTGAATCAGTAGAATAAACTCGGAAACTCTTGTCCCAGAAGCCACAAACCAAGATATAACGATTGTCAGAGGTGATGACAAAACACTGGGAATGTACCTGAATGCTTTGGTCTAAAAGGTCTGTGATTTGCCTTCTGTGCATACCTGTATTGCTGGCT----GAACAGAAAGACACAAAAATAAAGAAAT ........x:..x........:....x......:..:..............:..x.::.....:..:.....x..:...........:...........:..:.....:.................x...........:........x...............----...:..::..:x.x..x..:x.xx.... 163M4D28M 158/191 82.7% 191/94230402 0.0% 4/191 2.1% 116301996 73912559 +78060 chr4 + 190214555 150314918 150314917 150316194 1277 CAAATTTAACCTCCAATGGCAATTTATTGGGCTGTAGGACCCTAGGAAAATGAATACAAATATCTTAACACTACCATTGGCTGGGCAATATATTTCAACTTTGAAACTGCTCTGCAATTGCACATTAATCCCCTCAGACTGAACAGAAGGTCTAGGAAGAAAGGATTGATCTCCTTTAATGATGAAACCCTGGCACTACAGTTTTATTTTTCATAACGCAGTGCTGCTAAGAACCCCACTGTTATTATGAAAATTTTCCTAGCAAAGGAGCTCCATCACATTACCGGTGCACCAATTCATCATAACGTGCCTTGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATTGCATTCCAATTTGCATGCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACTTCAGGGCCACCATACAGAGCTTAATGAATCGCAAAGAGAGAAGGAAGTGACAGACCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATGGCTGGTCTTGTACAGCACCTTGATGAGCTGGAATTCACAAAAGATAAAGAAAAAAGGCATTATTTTTTATATACTAAACTACATAAAAA-TGCATAAGTCAAACCTTATGTAGAATTGT----TTCCAATCTCTAAATCTTTCATGCAGTTTTGTGAAATTTAAAGAACAAA---------------------AATCCAGGTGCTTTTATGGCTAGCTTATTAAACATTTATTTTAGATTAGTGCCGCTCTGAAC-TGTGCCATCAGCAGTGGCTCCAGTCCTAGGCCATAAGCTATAGCAGATGCTTGACTGGCAACCTCTGATGCTGCAACAAAACAAAATTAAGTGGTAAAGCGCACTGAAAACAAAATGTGACAACCATCTGCTGACTGTAGCAAATACTATTTTTTTGTTACTTCTTAAAAAGGCAGTTTTGAATGC-TACAGCACAAAGGA-----TCTACAAAAATGTCAACTTATGATGGAGAAAGGGAAAGCTCTAAGTCAGGGAACATTTAGTGTTTCATCCATCACTTAAAATCAATCAATTGAAAGTTTGAATAAAAATAAAGAAAGCTATCCGCAGATAAATGTTTTAGTTAAAT-----GCATTTGGCTGAAATATTTTCTT chr4 + 94230402 34009718 34009717 34011023 34009718 34009717 34011023 1306 CAAATTTAACTAGTGATGGTGATCAA--AAGATGCAATATCCTTGCAAAATGAATACTAGTATCTCAATGCTAAAACTGAGTGGGCCATATATTTCAACTTTAAAACTGCTCTGCAATTACACATTAATGCCCTCAGCCTGAACAGCAGGTCTATGAAGAAAGGATTGATCTCCTTTAATGATAAAGCCCTGGCACTGTGGTTTTATTTTTCACAACACGGTGCAGTTAAGAACCCCACTGTTATTATGAAAATTTCCTCAGCAAAGGAGCTCCATCACATTACCAGTGCACCAATTCATCATAACGTGCCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCACATTCTCAATCACACATTATTACAGCATCCATATTAATTTTCACTGACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATTGCATTCCAATTTGCATGCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACCGTAATCTACACTTCAGGGCCACCATACAGAGCTTAATGAATCGCAAAGAGAGAAGGAAGTGACAGACCTATGAGAGGATCGATTTCCACTGGCAGCTGGTAAGGCTGGTCTTGTACAGCACCTTGATGAGCTGCAATTCAGGAAAGAAGATTTTAAAACTCTGCATTTTTTTAAAATGGGATGCCACAAACATTTTATAAATGAAAGC-AATGTCCACTTTTTTTATTTAACTATCCAAGATTTTTCTGCACCACT-TGAA--TTAAAaaataaataagtaaacaaataaataaataTTCCAGGTGCTTTCACAGACTGCTTATTAAACATTTATTTTAGATTAGTGCTATTCTGAATGTATGCCATCAGCAGCAGCTCTGGTCCTGAGCCATAAGCTCTAGCAGATGCTTTACTGGCAACCTCTCCTGTCGCAACAAAACAAAATTAAGTGGTAAAGAGCACTGAAAACAAAATGTGACAACCATCTGCTGACTGTAGCAGATACTATTTTCCCCTTTACTTTTTAAAGCACTGCTTTGAACAAGTGAAGCACAAAGGACATTTTTTTTAAA---GTCAGTTTATGATGCAGTCAGGGAAATCTCATTGTCATGCAGTATTTAAAGAATCATCTATCATCAAAAACTATTTATTTGCAGGTTTGCATAGAAGTTAATATATAATTCTGCAGACCTACATTTCATCTGAGCACCTGGCGTACTGCTGAGATGTTTACCT ..........:xx::....::..:x.--::.x..:.:x.:...x.x...........x.:.....:..::...xx.:..:x.....x...............:................:.........x.......x........x.......x............................:..:..........:::.............:...:.:....x.:.............................:.::.........................:..........................:.................................................................:...........................................x........................................................................................................................................................:.....................................................................................................x...............................x......x:.....x:.xxxx....xx.xx:.......xx.x.:x::.:xx..:...x.-.x:....:.x...x.-x....xx.x..x.----..:x.x.x..:..:x:...:x....x:x:.-....--.....:..:...---------------------.x............:.::.x:x..............................:::......:-.:............::....::.....::..........x............x.............xx..::...........................x..........................................:..........:::x..xx:.:..x...:x:.x.:......::x-.:x...........-----.:.x:...---....::........x..xx.......x...xxx....x.x.::.....:x.xx.....:....::x....::.x.:.x...x.:.....x...:..:.x..x.x.xxxx..:.....:xx.::...:.x:.:.::-----..:.x:x.....:..:...x.:. 26M2D740M1I15M1D13M4I30M1D4M2D12M21I62M1I186M1I14M5I8M3D135M5I23M 1056/1268 83.3% 1306/94230402 0.0% 47/1268 3.7% 116305200 73909355 +55262 chr4 + 190214555 150321074 150321073 150322990 1917 TGATTCAGACTAATGCTTGAAAATTAAAAGCTTAAATGTTGAGATATGCTATATTTAAGTGGGTATTACACAGTGTTCAGC--AGTTACCATGCCTTATAATGGTATTTC------TTTACTTACCAGGAAGGTTGTGCCATTTGTTCACCGCAAATAACCTGTTAGCAGTGACTGTGATCACAGCGGGAGTTGCCAAACCAGGCTGGGTGTTGGCTGCCACGTGAGTAACAGGGGAGTTGGAGGGAAACTTGAGGACCATGATAACATCCTGCTGGGCTTTGTCTGTGAACATCAATGGACTCTGCAGGAGGAGATACTGTTGAGTGGGCATGACAAGA-CCCAAATAGACAAGAAGGAAAAGATGAAGAAAGACAAGAAAGAGAGGGGGTGCAGGAAAAGAAGAGGAAGACCATATTAACATG----------------AGTTGTAAGTGGAAGCACAGTG-------AGCAGAAAGGCTTGTAGAAACAGCAGTCATGATCTG---TTATTCATGTATGTCGTTAGTTGGAATTTTGGGGGACTGAAGT--------AGAATACATTAACAGAAACACTTTAAAATTTATAAATTTTATGAGCTCCCTTTCCCTCCCCACTGCCACGAAAAACTAAAAGAATGATTTGATTTAGATTCTACACAGGCAAAGTGCTGGGGATTGCATTAAACCATTCTGGTTGCTATCGTGTCACATAATGATCTTTTAGCACTAAAAAAACAGTAAGAATGGACAACAGGCATAAAAGCAAGACAAGGTAATTTC------CAAAGATCATCAAAAGTTGTGTTGAGTTAGCAGG--AAGATTTTGACAACTACAA---AGAGG-----------------TAATGAAAACAAATACATTTATAAACAATAGTTAGACTGCATGCATATATTATTACAGTAGAGAAATAACTTATGAACGTAATATACAA-ACTTAATTATAAAGGTGTTTGAAAGCA-----ATGCATAAATGTACTTGTAAAAACAATATATTTATATAGTGTACCAAATCATAAACACTGCCTATTGTAATGCAAATGCTACTGCTTTCTGCTGTAGCTAGGAATA------AAGAGAAATACCTAGGTGTTCCTCTTCCCTGTTGGTTAAAAAACAAACAAAACTAGAGCTCAAGACTTTTTTGATTTCTCCTTCAAAAAACAGAGTAATTGAAAATGTTAAATGAAACACTGTCTGTTCTAATAA-----CCAGCAACCAAATAAATCTTGAAG--ACTACTAAGGATTTGGAACATTCTTACAACCCATATGTCATAATCCAAGACATAT---ATAACACTGC--TCTGATTTATTGGCTTTATTTA-----------TACTTTGTGGT---GGTGTGCTATCATAC--------AGTAATTGCACTGTACATTTTCAGCAATTCTCTCCTACCATGTCTGTTTTCTAATAGCTGATTAGTATCATTCAGAATTGAAACACTTTGATGAAATGCTTCTGGCTGCTTTCCTTCTGCCATATTTCAAAACACCAGGTAATATGTAAATGTGGAGGCACATATATTTAACACATATTTATTCAGAACTGGTAATAAAAAATTAAATACATTTGCATTTTTATTATCAGTCCTTTTAAAAAAGTTATTAAGAGTACTTAGAAAAACATATTGCACTAAGAATTCCTATTTGCACTCTTTGCATAAAGGTGTAAATAAAGGCAACTAATAAGCTACCCGGACACCCTTCTGAGCAAGTGGCTAAAAGCCAATCAATATTATGAGTTAATCCTCCCTGGATGCTCATTCAATTAAAGGTGTCAGTAATGCCTCATCTGATGTGGCCTCAATTAAGTCCAACTATCTGATGGTGTGAAAACACAGGGGGATACAGCAACAGCAGCAAAACCAGACAAATAGGCAGCCTTCGTGTGCCTGCTAATTACTACACCTGGTGTATATTATGGTTCATGCACTTAACGCAGCACGAGGTGGCTTTAATTTCTGCTATATTTGTGTGT chr4 + 94230402 34013009 34013008 34014808 34013009 34013008 34014808 1800 TGAATAGGACTTGTGTTTCACACTTAAAATCTCAAAC----AGCTGTGC-----------AGATAATA---AATGTACAGCTTGATAGCAGTGATTTCTTATGCTATTTACTTTAGTTTACTTACCAGGAAGATTATGCCACTTATTTACAGCAAATAGCCTATTTGCTGTAACTGTGATCACAGCAGGATTGGTCAGACCAGGCTGGGTGTTGGCTGCTACATGAGTGACAGGGGAGTTGGATGGGAACTTTAGAACCATGATAACATCCTGTTGAGCTTGGTCTGTGAACATCAACGGGCTCTGCAGGAGGAGATACTGTTGAGTGCACACAACAAGAACCCAAATACATG----GGAAAACATGGGG-----TGGAGAAGAGAAGA----CAGGACAAGAAAAGGAAGATTGCATTAAAACTCAGAAGATCCAATAGCAGTTGCAA-TGAAAAGAAAATGTAAAACTAGCAGAGAGGTTTGTGGAAACAACCATTTTAGATGGAAATCCTTTATGTAAGCAATTATGCTGAGCTTTGCTGTAC--AAGTCTGTCTATATATAAAATTTGCTGCAGATCCCTAAAGATTA--AACTCAA--AGTTTCCAATCACCTATCTCTGCCA-----------AAGAA--ATTCTCCTTCATATCTACAGAGATAGCATGTCAAGGAAAGCAGGAA--------------------GGAACA---------------ACAAAAAAAAGAATAA-----------------AAAAGTGAGCAAAAGAAATTCCTGCTTTCAGAGATTGTCTCAAGTTGCATTAAATTGGCAGACTACAATTCT-----CTACAAGCCAGAGGAAAACATAAAAGCACATTAAAATAAACAGATACACACATAGTC--TAGATATATGTTCTGTATATATTTCTGGTGCACAATCAAGATTTATGAATGCAAAGCAAAAGACTTCAGTGCAAATGTGTTTCAAAGGACAAACATAATTAAATGCAGTTGTAAAAAA--------TATAAAGTGGACATGATTACAGACACTACCT------------------------TCCACTGTCTCTGGAAATACTAAAGGAAGGGAATGAATCCAGGTTCATTTTC------------------AACAGAAT------------ATTTTTAGGTTTCATTTTTTGAA----------TTTAATAAGTCGAAAAGATTAATAACTTTTTAACTAAGATCTCTAACAACAGTGAGAATGTCAAAATAAGTATCAAGGACATGAGATCTGGATGTCACGCATAAG----AAGGAAAAGCAAATGCAATAACAGTGCATTTGGGATTGTGTGGTGTACCTAAAAAACAAAATTCCATTGAGATACAGAAATACAACCATCCTAGTCACCAGTAGCCACATTGC-----TTCAGTACTTGTAT-------------TTTTCTAGTAACTGC---------------GTTAGAACACTA----AAAGTGTTCTTGGCTATTTTCCACCTGCAATATTTCATTACAT------ATATGTATATGTGAC--TATATACATCTAATGTATATTTATACAAAACTAATAA--AAAAATTAAATACATTTGCATTTTTATTATCACTCCTTTTTAAAAAGTTATTAAGAGTACTTAGAAAAACATATTGCTCTCTGCATTCCTATTTACAGTCTTTGCATAAAGGTGTAAATAAAAGCAACTAATAAGCTACCCAGACACCCTTCTGAGCAAGTGGCTAAAAGCCAATCAATATTATGAGTTAATCCTCCCTGGATGCTCATTCAATTAAAGGTGCCAGTAATGCCTCATCTGATGTGGCCTCAATTAAATCCAGCTATCTGATGGT-TGAAAACACAAGGGGATACAGCAACAGCAGCAAACCCAGACAAATAGGCAGCCTTCGTGTGAGTGCTAATTACTACACCTGGTGTATATTATGGCTTGTGCACTTAACGCAGCACGTGGTACCTTTCGATTCAGTTGCATTCATGCAT ...x.x:....x:..:..x.x.x......x..:...:----..x.:...-----------:.:..x..---.:...x....--::.x:.x:..x:..x.x...x.....x------................:..:.....:..:..:..x.......:...:..x..x..:..............:...x.x.:..:.....................:..:.....:..............x..:.....x..:.................:..:....x...............:..:...........................x:..::......-........x.::----......x...::.-----:::::......:.:----.....x.....:.......::::.....x.:x----------------.....:..-..:..:x.x.:..-------......:...:....:......:.x:.:x.::x:x.---.:x..:.....x.:x:...xx:x..::....xx.x..--....--------.x.xx.x...x:.x.x.:xx.::....:x...--..:.:x.--..:.:..xx..x.::x:.x......-----------.....--...:xx:..x:xx......x..::.:x:..::::...xx...xx..--------------------.xx...---------------..x.......x.:...-----------------.....::..xx..:.x....:.------..:....::..xx......::..:.:..:....:--.x:...:.-----......---.....-----------------...x:x.....:.....:x:...:x.--...x..x.:xx:x..:.......x:.:xx.:.x.:xx.x:.:.......:.:..x::.x..-....x.x.::...x......x....x.-----..:xx......:.x.........x--------....x....x..xx:..:.:.:.....:...------------------------..::....xx..:.:....------:.::.:...:xx.xx:x....x.:...------------------....:..:------------x.....x.:....x::..:x:..----------..x..x.x..::..x::.x:.x.:x..x..:x.x...-----.:.:....x:x:x:...x.::..:--.x..::.....:x..::.:x.xxx.::x..x....x.----..xxx..::..x..---......x...--.:x.:x..:.xx.x.x..::..-----------.x.x...x.:.---.:x:.:.x.:...x.--------....::::..:..:-----.....:.x..x.x.-------------.......:..:...x---------------:..::......x----:..:..:.::.....::.....x:....x........xx...:------.......x.....:x--:.:...:..:...:::........x..:....::...--................................x.......x....................................x..xx.x..........:..x........................:..................:................................................................................:.................................:....:............-..........:.......................x..........................xx...............................:.::..................x...:x....x:x...x.:.::...::..::. 37M4D8M11D8M3D10M2I27M6I224M1I12M4D13M5D14M4D32M16I8M1D13M7I36M3I37M2D4M8I32M2D7M2D25M11D5M2D46M20D6M15D16M17D22M6I34M2I8M5D6M3I5M17I26M2D61M1I27M5I24M8D31M24D19M6I27M18D8M12D23M10D37M5I24M2I37M4D14M3I10M2I22M11I11M3I15M8I14M5D14M13D15M15D12M4D43M6D15M2D37M2D274M1D148M 1246/1683 74.0% 1800/94230402 0.0% 351/1683 20.9% 116308065 73906490 +27436 chr4 + 190214555 150325789 150325788 150326250 462 AGAGTAAAAATAGCACTTACCACTTGCATGGCAGAACCTCTGGGAGGATGGGGCTCTATGAGTAGTTGAGAAGGAGTCTGTCCAAAACTTCGGATTTGAGCTTCAACAGCCTGAAAAGGGCAGGGGCAAGTCTGAAGGTTAAGAGGTGCTAATTACAGGAAATAGAACCCCAACTGTCACCTGAAAATATCATTCCATAC-TCTGGCTTGTTTCATGCTGAAAATCAA-CCTGTGTTTTCACAGTGGGGCTAACCACCTGGCAAGGGCATTGAGGGTGAGGTCATCA-TTTAGAACCGCAGAAGCTGTTCCTCT--AAAACTCTGCAAAACTTTCTCATCTTGCTCAGTGATATGAAACAGAAACCAGCTATTACAATCAGAAATTGTCCTTTTTGGCTTCATCTCTGTTTTCTTGCACTTGGTTTTCCTGCTTGCATCATCCCCAATGATGAAAAGCTAATCTTTT chr4 + 94230402 34016589 34016588 34017052 34016589 34016588 34017052 464 AGAGTTAACATGGTACTTACCACCTGCATGGCAGAACTTCTTGGAGGATGTGGTTCTATGAGCAGTTGGGAAGGGGTCTGTCCAAAACTTCGTATTTGAGCTTCAACAGCCTAGAAAAGGCACAGGCAGGTTTGCATGTTAAGAGGTGCTAATTACAGGCAATAGAACCATAACTGTCACCTGAAAATGTCATTCCACACTTCTGGCTTGTTTCATGTCGAAAATCAACCCCGTGTGTTCACTGTGGGGCTAAGTGCTTGGCACTGGTACTAAGAATGAGGTAATCGTTTTAGTACTGTGGATGCTATTTCCATGAGAAACTCTGCAAAAC---CTCATCCTGCTCAATGATATTAAACAGAAACCAGCTATTATAATCAGAAACCCTCTTTATTGGCTTCATTTTTCCTTTCTAACACTGGCTTATCCTGTTTGTATCATAACTCAGACACAAAAGTTAATTTTTT .....x..x..:.:.........:.............:...x........x..:........:.....:.....:.................x...................::...:....x:....:..:..x.x......................x.........x:.................:........:..-................::.........-..:....x.....x..........x::.:.....xx..:.:.:..::......x...:-.....x..:.::..x...:..:.:x.--:..............---......:......:......x...................:.........::x..:..x..........:.:.x:.....x:....x.x..x.....:...:.....xx.:x.x:xxx.....:....:.... 200M1I27M1I58M1I26M2I15M3D133M 373/459 81.3% 464/94230402 0.0% 8/459 1.7% 116309200 73905355 +3206 chr4 + 190214555 150334786 150334785 150334859 74 CAAATATTTGGTATATCATTATTAAGTTTTTTTTGTTTTGTCTTGGTTTTTTTTTTTTTTTTTTGACAGAGTTT chr4 + 94230402 68433066 68433065 68433139 68433066 68433065 68433139 74 CAAAGGACTTGCATCTTTTTACTGTGTCTTTTCTGTTTTGTTTTGGTTTTTTTTTTCCTTCTCTGTGAGTATTT ....x:x:.x.:..x.:x...:.:x..:....:........:..............::..:.:..xx..x:... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 81901720 NA +3789 chr4 + 190214555 150335383 150335382 150335487 105 ATATATGTGTATGTGTGGCTGTGTATATATATATACACACATATATACATATATATATACACGTATATATGTGTATATATGTGTATATATATACGTATATATGTG chr4 + 94230402 21109195 21109194 21109297 21109195 21109194 21109297 103 ATACATGTGTGTCTCTG--TGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ...:......:.x.x..--..x.::...x.....::..x..:......x::.:..:x..:......:..:x::.::x.x.........:.:..:.x....:::.. 17M2D86M 68/103 66.0% 103/94230402 0.0% 2/103 1.9% 129226188 60988367 +3227 chr4 + 190214555 150335420 150335419 150335507 88 CACATATATACATATATATATACACGTATATATGTGTATATATGTGTATATATATACGTATATATGTGTGTGTATATATATATACACA chr4 + 94230402 22600181 22600180 22600268 22600181 22600180 22600268 88 CACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ....x.x..x..x:x.x.:.:...::.x:.:...::x.:.:...::..:.x.x...:......x.............::..::..::. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 127735239 62479316 +3561 chr4 + 190214555 150335464 150335463 150335655 192 TGTATATATA-----TACGTATATATGTGTGTGTATATATATATACACACACATATACGTATTATATATGTGTGTATATATATATATACACACACACATATATGTATATATAAAGCACTTAG---AACAGTTCATGGCACATACTAAGCTATCAGTAAGTGTGTGATATTATTACA-----GCATATATAT-TAAAGACTTAACAC chr4 + 94230402 11533562 11533561 11533752 11533562 11533561 11533752 191 TGTATATATACAGGGTAAATATATATGTGTGTGTGTATATGCCTCCAAATACGTATTTTTACTATATATGTACTTGCAGACGTTCGTGCAGGTGCAC------GCATGCAAAAGGTA-TGAGCTCAACAGCCC-TGGCCGATGTGCAGCTGGCTGTTTGCATGTG-------TACAAAGCTGTATGTATACACACAGACTTAACAC ..........-----..x:...............:.....::x.x..x.:..:...x:x..:.........::x.::.x.::.x::.:..x:::...------.:..::.x..:.:.-.x..---.....::.-....xx..::xx....:x.x..xx.::....-------....-----.:..:....:-:.x........... 10M5I82M6D14M1D4M3I8M1D31M7D4M5I10M1I14M 120/177 67.8% 191/94230402 0.0% 29/177 16.4% 138801902 51412653 +24383 chr4 + 190214555 150336632 150336631 150337106 475 ATGGAAGTTACTAATGTAAAATATGATGTAATTATAATTTGTGAAAATGCACACAGATTTTTCC----------ATTAGTGCCTGTAA-CGGAGCCCGTACTTTTCAGGCACATTAAACTGAGTCCCAACCCAGCCTCACTACAATCTCCAGTTCTTGTAGCTGTCCATCTACTACAGCATAATCCCAGCTGCCAATCTGAAAGAAACCAGCTAGTCAGAGCAGACACAACCAACAGAAACAAACGTCACTCAATAATGTTCAGCGGCACTGTGTTCATGGATAATTTCAAACAGTATCTCTGTCTAGAACATTGATGTGCTCATTCAAAACACCTCCATCTCTGGCTACTGGAAATGAGTAGATAAAGCAGCCTG-CCTAGAAAAATAAG--TGGAATGTCTTCAAAGAGGTTGCCAATGCTAAGAAGCAAATGTTGAGAAAACACAGTAAAGGTCTTAAAGGAAAAAAACTCAACAATATCCAGAGA chr4 + 94230402 34022290 34022289 34022753 34022290 34022289 34022753 464 ATGGCAGTCATTAAAACAAATCAGGAAGTAATCACAGTTTGTGAAAATACAAACAGATTCCCCCTCAGGGCCACATAAGTTGCTCTGATCTGAATATATACATTCCAGGCATATTAA-----GGTCTAGCACGGCCTCACTGCAATCTCCAGTTCATGCAGCTGTCCGTCTACTACAGCGTAATCCCAGCTGCCAATCTGAAAGAAACCAGTTAGTCAGAGCAGACACAACCAACAGAAACAAATGTCACTCAATAATGTTCAGAGGCACTGGGTTCATGGATAATTTCAAACAGTATCTCTGTCTGGAGCACTGATGTGCTCATTCAAAACACCTAAATCTTTGGCTACTGGAAAGAAGCAGATAAAAAAACTAGAACTAGAAAAACAGGTCTGGAAGTACTTCAAAGAGACTGACAAAGTAAAAAGGGAA------------------AAAGATTCTAAA--AAGAAAGCTAAGAAAAACTTAAAGA ....x...:.:...x::...x:.x..x.....:.:.:...........:..x.......:::..----------..x...xx..x.:.-.x..::x::...x..:......:.....-----.x:.:.:.x.:........:.............x..:........:...........:...............................:................................:...................x.......x.................................:..:..:.......................xx....:.............x:..:.......:x.:.:x.-x.........:.:.--.....xxx..........::..x...x.:x..:.:.x..------------------....:.::....--..:...:..x.:x..x.:::.:... 64M10I14M1I28M5D254M1I14M2I39M18D12M2D25M 361/450 80.2% 464/94230402 0.0% 39/450 8.7% 116314342 73900213 +24215 chr4 + 190214555 150337528 150337527 150338081 554 TATGGTATTTTAAATGTAGGTTTTCAATTAAAACCTGACTAATCCTTACCGTTTATTTGGCTTCTCATTGTACAGTTCCTGCCCTGCACTGTGTCAAATATGCCATCTGTGTAACACACTTTTGGCCAGAGGTACTTCAT-GATTATTTCTATAACACTTTGAATTGTGGCTGCATGAAATCTTAACTT-CGGTATTCAATAC-TCCTAATTTACTATATTGCTACAAC-CACTGTAATCG---TGTCCTACTCTT-AAATCTCACCACAGTCACAACAAAGATTCTTGCGCCACCTGCTTGAAACAGGCTTACAGACCACTCCCCCAACTATTTAACAAATGTTAACAATGCTATAAATACTAATTGTGTTTATGCTTTCTGAAAGATTCACTGCAGCCAGTGTTCTGCAGCAGTGTTGGAGCTG----------CTGACTCCCACCA-----ACAGACTGATGGAATTCTAAGCCAAAAATGCTTTTCCTTGGATAAGATATCTGATTTGCTACTGCTGTCATGAAACTGGGGTCATGTAAACTTAAACACTGCTGCTGCTTCTTTTGGAAAACA chr4 + 94230402 34024642 34024641 34025200 34024642 34024641 34025200 559 TATGATATTTTAA-TACTGATTTTCAATTAGAAATAGACCACATCTTAACATTTATTTGGCTTTTCAT---GCTGTTCCTGTGTTGCACAACATCAAGCATACCATCTGTGCAACACACTTCTGGCCTGAGATGATCCAAAGATTGTTTCAACAAGAGTTTGAATTTTGCCTGCATGAATTTGTTACTTACTGTATTAAACACATTTCAATTTACTGCTCTGTGACAGTATTTTCTAATCACTTTATCCTACTTTTTAAAACTCATCACAGCCACAACAAAGACTGTCGCTCAACCTGCTAAAACCAGACT----GATCATCTTCCCA----TTTAGTAAATGTTAACTATGCTATAAATACAAATTGTGTTTATACTTCGTGAAAGATTCACTGCTGTCAGAGTTCTCCAGCTGAGTTAGAGCTGAAATATGCTATTAACTCCCACCATGAACACAG-CTAAAAGAG----AGGCCAAAAATGCTTTCTCTGGGATAAGATATCAGATCTGCTACTGCTGTCATGAAACTGGGGTCATGTAAAC-TAAACATCCTTGTAACTCCTTTTGGAAAGCA ....:........-.::x.:..........:..x:x...:.xx:....x.:............:....---:.x.......:x:.....x:::....::..:.........:.........:.....x...:.:x.:..x-....:....x.:..x.x........x..x.........x.:x.x....-.x.....x..:..-.:::........::x:..:x...::-:x:.x.....:---.:.......:..-...x....:.....:...........:.x.:..x.x.......x:..x...:..----..:..::::....----....::..........x.............x............:...:x...............x.:...x.....x....x.x...:......----------:.:..........-----....-..:.x:..:----.:..............::..x............x...:...................................-......::x:..:x:..:..........:.. 13M1D54M3D69M1I48M1I13M1I25M1I11M3I12M1I54M4D13M4D94M10I13M5I4M1D9M4D73M1D31M 416/536 77.6% 559/94230402 0.0% 41/536 7.6% 116312886 73901669 +13021 chr4 + 190214555 150349966 150349965 150350168 203 TTGCTTTCT-CAATTCAGATAA---CTTACCTCTCTCAACACAGGATCAGTTATTGAATTCAGATTGACAGCTCCTTCATAGGTCAAGTAATAGAACACATTGAGGGCTCGGACAGCTTCTGGTCCTTGCTGTTTATAGCCAAAAATGAGATCAATCCATTGGTGAAGCTGGCAGGAAACAAATTCACTCTCCAGGGCCTGAAAAAA chr4 + 94230402 34030728 34030727 34030934 34030728 34030727 34030934 207 TTGATTTCTGCATTTGAAATAAAATCTTACCTCTCTCAATACAGGATCTGTTATGGAACTTAAATTAACAGCGCCTTCATATGTCAAATAGTAGAACACATTCAGGGATCTGGCTGCCTCTGGCCCTTGCTGTTTGTAGCCAAAGATCAGATCAATCCACTGATGAAGCTGGCAGGAAACAAACTCACTTTCTAGTGCCTGTAAAAA ...x.....-..x..x.:....---..............:........x.....x...:.:.:...:.....x........x.....:..:...........x....x..x.:.x..:.....:...........:........:..x...........:..:....................:.....:..:..x.....x..... 9M1I12M3I182M 171/203 84.2% 207/94230402 0.0% 4/203 2.0% 116319238 73895317 +3038 chr4 + 190214555 150350440 150350439 150350512 73 TGCGCCTGTAATCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.......:.::::........x.xx.x...x.:........::.:..x:xx:..:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 74317235 NA +84766 chr4 + 190214555 150352639 150352638 150357449 4811 AAGTAAATGCCTA-TTTTAAGTACATAAATTTGAAAAAAATCTAGGAACTACTAA--------TGCAAGTTACACACAGAAATGATACGTTGGTTTCATTAACTTAGACCTTGGGTAGGGATGGGGGTATGGGGTAGGCACATTTACAATGACACATAAAAACAGCAATTGTCTTAATTTGTGTGCAGTGCACTCTACACAAAAGCCCTAAATATGTTCAAATTAGAGCAAGCTGCTTGATTGTCACTGCAGTCTCATGTCACATTAATGCATGACAAACATTAAACCATACACTTAAATGGCAATTTATATCATTTAAATGTTTACTGCCAGACTAGCTCATCACTCATTTAAATGTGACTTTCTGACAGCTAATTTCAGTTAATTTTCTCCAATTCACTTAATTAGAACTTTCAATCAGGGAAGGACCTATGCATATCTTCAGGCTTACATC---CTTTTTGGTGGCTGTTC---------GAAATCTGAGTTCATAAACTGCCGAAAAGCTCTACTATAATAGATTA-----GCATATAATATCTCT------GAGTTTACAAAAAATATGACTCTATGAAGAGTATATACTCACAGTATATACTCTTAGAAAGAACTTATACTTATTTATGTAAATAGTACTCTTGCCAGTAGTTTAAATAAAAAACGTGTAGTTCATATACACACACTATTGAAACAATAAACAAACCCTGCATCCAAGCTAATTAAAAATTAATGATTTCAAAATTGTTTAATAAGATAAAAC-AGTCAGGAGTCTCCTGAGTGTCCATGGTGTTGTGATTTGAGACCATAAAATTCTAGAAGGCTCAGCAAATGACAAAG-TACAAATGAATTTTCTCAATATTAAAGCTCTAAAAA------------CTAGGGCAATTTTATT-TTATGTGTCACCAAACAAAGAACTGTTGAATTTTCCTTACGGTTGACTACTTCTTTATGCACACTCAAAATGGTAAAGTTGGTTAGATTTCGATGCTTAAAGCTTTACATCTTGATACTGCATCAGAATTTTAAGCAAAAATGCTGAAAGGAAAGCTACCGTGTGCTCATATCATGCTGCAAACACACATGCAGAGATCACCACAATGCCATGGTTCAGACCTCACCTTACATTGTCA------TAGGTCAGTCCTT--AAGGAGTTGACCAGTAAT-------------TCGCGGAACTATTGGCA---------AAATCACTTCCAG-----AAGTTGATAAACACGTTACCTTCATGA---ATATACTT-----TAAATAATTTCTCAAACACTCAACTAAAAATTCC---ATTAGTCAGCTTCAAGCATGTCTTGCAATATACCAAAGCTT---TAAAAAGGGACCTAAAAGAACAAAGTGGTAAGTATAAGAGAATTCCAAGAAGTTTCAAAGTCATTTCAGTACAA-AGTCAGCTCCGAACTTTAACATCCTTTTGCTATCAGTGAATGACAACTGCCTAACCAAAAGTAG--GTAATGCACTTAAGACTTGAGGGGAGAGAGAAGGACAGGCAGGAAGAA--ATTAAGGGAAAAAATAC--------AAACAGAATGTAATTCAAAATGGAATACCCTGAGGTTGCCTTTTATAACTCCCATTTTTAAGATTTAAAAACAT-------AAAT---------CATAAAACCTAT------ATTAAAATAGCTTTTTTATATATTAAGATT---TTTTAAAAA--AATTCTTCATATATAGAAAATTCTCATT--TAGATCTACATTTTTAGTTACAAAAAAATGAAAAATGCCAGTGGAATGCTGAGCATTTGAGATTTTTCAA-AGCCTTCAAAACCGACAGTCCTCATTAAGCCTGGAGTTAAATACGGTTTGCAGCTAGGGGATAGTAACATTCTTCCCATGCTGCTCTCAAACCTAACCAATCAATTGTTA--GTACTCCCCTAGCAGGCTGCATACATCACTTACATCCAATGTGTGCTCTGAGTAATATTTGTAAAA-AAGAAAATCCACTAAAATGTCCAACACAATATAATAATATTCAACTCATCTGAGTTATTATAAAATAAATCAGTGACTAATGTCCAATTGTTAAGGATCAGATAAGACTATGAAAAGACTATCATATGAAGCCTCACACGAATGTTCAATCCAATCCAGGGGGACTCATATTAGTGTTGACAAACTGTCTTGGCGCTGATATCTGTTTTTTTTAATGAGATCTATTAGGCAGAG--TAAAATACTTCAGATATGCTAAAAAGTACAGTATACAGATGTCAAATACA----CTTATTACTAACTTTCATTTGTTTGTTCTGCATACAGAAT---------ATCAACAAA-----GTTTTAATATTATAAAGATAATAGTAAATTATTCATAAATA----------GGAGGTTTGTATAACCCTGTGTCAGAAATAATTACAATATGTGTGTGTGTGTGTATATAT---ATATGTGTGTGTCTGTGTGCATGTTT-----------AGCAAATCTCACTGAAAGAACACAATCTATGCTTTCCTGAAACTAACTCACTTAAGAAAT-AGATTATTTCT-------TTATAAAAAGTGTTATATAAAATTATTATTTTCTATAGTGGAGTCAAAAAATGT-----GATAACATATAGAAACAGCTTTTTCCAAGAAA------------------------CTCTAAGCTATTTGAGA-ATAAAAATTCTAAAC-----------TAAAAGGCATTAACTATGTATTT--------AATCTACACATGCATTAGTGA-------------------TACACTAGCAATTTCCTTTTATTTTCAAAAAACCAAATTTTTGCCAATGTAAAAATCAAGAAAACCAATTTCAATCAACAAAGGAAATTATTAGATAATTGTTTACCTCAAGACCAAGAAACCTTATTTGTT---------------TATTATTTATGTTTCTCAT-------------ACTTGTCATT--CCCAGCTT------AATGCTAATA-------TTTACTTATTCTTTGGCT----------AAACATTCTCATACCACTCCATTAAAAAAAGAAACTAAATAAAAACTAGCAATATC---TATGGGATAAATGATT----------------TTTATAAAAAGTTAAATAAA---------AAGATCAAATATTCTTTATACACTTTTTATAA------CCAGAGAGAATAGGCCTAGGCAGCCCAGAAAT-ACATTTCTGCACACCTGTACCACTACTTCCACTCCCAGGCTTCTAGAAGGCCCAAGGTACAAAGGTTCTGAGATACAAAATACCATAGCTGTAAGTTTCAAATGAGAAAATGAAAATCACTGATTAACCCTCCTGACTTGAAATACATTTACTTATAAGATGTATTTAATCGTATTTATAATGAATGAAACATCCATTT-TGTAAAATTTTAATTGTACTTATAATTAAGAGTCTTAATTCATTTGAACATAGATAACAGTATGTTTTAAAGGA-ACTGACATTGAGATTGGCAAGGCGGTAATATACAAAGTTATAAACTTGGAATTTTAAGTATTTTTCATTTTAAATCCAT-------GTAATACGGCCTTCTTCCTATACAAACACATATACACACA-----------GAGATTTAAAA--------TGAACTGGTCTGTTATGTTTGCATGTGTTGGATTTCAAACACTAG-TGGTAATGTTTCCTTAACATTGATATATGACCTTTGTAATTTACATTGAAGAAAGCTGTTTTTTTCAGCCTAATTAGAACTGTTTCAAATTTTCCTGCTAAATATATGATATAAAGTCCTTTCAACTTTTTT-----------ATTCTAGAGTTTCTTTCCATGTCAACTTTGTTCCAATCAAAATATGCTTTGAATTAAATGATTTTGATTGAATATGTGGATCACATTTCACTTCTAAGATGTAAAGTCCAAAAAGGAAAAGTTTAGCCTGTTCAAACAAAGCAAGAGCAGCCACTTTGCGGAAAGCTATTCACATTTAAGAAGACTGACAAATTGTTTGTGTGCACCATTAGGTCTAGTTTCTGCAATAGTTGCCAGATTTCCTGTCCCCCTAATAAGATGCATTAACTCCTTAAATGCTGGCTCTGAATTTGCAGTGAATCTGAGTTACTTTAGCAAATTTCAATTTTATCTATAGGTAAATTTCC---------TTATTTGA--------AATAAATCTAAAGAAAATAAAA--GAAAATTTG-----ATGTTAACTATGTTGTATCAAAATTTTCTAAC-------------AAAGGTCACAG---------------------------------------AAAATTAACATTTTTTCATATTGGTTGGATATAAATTCAGAA-----------TACAAATATGTTTTCTATATGTGACTTGCCAGAAGTGACAAATTCACATCAAT----CCTCATTTAAAAAAAATGCATCAATTTCAC----TAATTTAAAGATTACATCTTCAGGTAAAACACAATGGAAATATTTAATAAACTAAAATCCATGAATATGAGCATCAATTTCCTCCACATTGATTATATATAAAAC---ACAATGCTTCAGA--GTTCAGCTATTT---ACCTTAATATACATATATATATAATGTGAAACAAGCTTTATCCTATTTACAAAGAAAAGTTTAATTTTGAGAGCTTAAAAAT---------ATGTG---------TGAAATTGT------------------------------------------------GACATTAAGATCAATAAGTCATGAAGCCCAAGAAAGTA-------AAAATGGAGGATCAAA----GATTTAGGGAAAAA-----ACTGTGGGATGCTAAGAATAAAAATTGTATCAGACAGTTTTAAAAAATGAAAT-----------------------TTAGTCAACAACATACTGAAGTTCAGCCTGAAAAGCAGATAGAGAA---------------ATCACT-----AAAAGGGGTTCTATACTTCTAAACTGCCCT-------TGAACTGTTGGGCAGAAGAGATATTTTGAG--CCAGCAGTACACAGTTCA-----TTTCTACATTTATATCATTACTAAAGAAAAGTGTGAGTTAGTATCGTATCTTGATATAACTATCAAGCACTCGTGCATCTTTTGGCAGGAGAATCATTCTGTCTACGATTGTTATTGTGTAGTTTTAAATGGACTAGTCAACCAGCTGTTATATATTTTATACACTGAAGGCCATGTTTCCTTTGAAATTCATAGTTTTAATCTCAAC-TGAAGTCTGTATTGCTGTGTGCCAAGATCAAAAGGATTAGACAAACTTGTACAATTACCTTCCTT chr4 + 94230402 34031786 34031785 34036800 34031786 34031785 34036800 5015 AAGGAAATTCCTAATTTTGAGCAGAGGAAGTTAAAATTAATCTAAAAAACAAGGAAATCACTCTGCAAGTTGCACAGAGAAATGATGGGTTGGTTTCATTAACCGATCCCT---------------------GAAAACAACATTTAAATTGACACATAAAAACAGCAATTGTCTTAATTTGTGTG--GTGCACTCCACACAAAGGCCCTAAATATGTTCAAATTAGAGCAAGCTGCTTGATTGTCACTGCAGTCTTGTGTCATATTAATGCATGACAAACATTAAACCATACACTTAAATGGCAATTTATATCATTTAAATGTTTACTGCCACGTCAGATCATCACTCATTTAAATGTGACTTTCTGACAGCTAATTTCAGTTAATTTTCCTCGATTCACTTAATTAGAACTTTCAATCAAGAAAAGACCTGTACATATCTCCTACTTCATATCATTCttttttattattattatttttattaGGATCCCCAGCTATGGAATTGCTGAAAGCATTCTTTAAAGCAAATTACTACAACGTGCAGTATCTCTTCGGTTGATCATATGGAAAA----ATCCTATAA------------CACAGGAT---TGCTTTGACAGGATTTTCTTCTCTTT------------Ctttttttaata----aaaaaaaaaaaGTTTAG---ACAAAGACACACAATTAAAACTATAAAAAAAC---ACAAGCAGGCCAATTAAAAATTAATGATTTCAAAATTGTTTAATAAGATAAAACCAGTCAGGAGTCTCATGAGTGTCCGTAATACCACAATGTGCAGCCATAAAATTCTACGGCGTTCAGCAAATGACAATGATAGAAATTAATTTTCTTGCT-TTCTTGCTAAAAAAAATAAAATTAACCCTAGAACATACTCACTGTTATTTAATGTCAGGAAAAAAACAGCT--------TTAAGGGTTTGTGACTTTT-----------------AATATATGTGGTTAG---TACATGCAGAGGTTGTTCCTTCTTCCT-TTGCTTCAAAA------GCCAGGCTTGTAATGGG---------------TCACATTATACTCATAAAGCACATG----AATAACTGAAGGAATATCACTCTGCAATCTCCTCAGATTAACAGATATCTAAATCTGACTTTTAAAAAAGCAGAACTGAAATACACACTGCCTTTTCATGGGACGGTTGGTAGCCATCCTGAAAGTACTTCTCTTTTCCAAGTTTAAAATTAATTTACACTTGTAATTTATAGATTCAAAACTAGATAATT---------CTCACTTATTTTTTTCCATATTGGACCATTTTAGACCATTTTCCTCATTTGCCAAATTGCAGACACAAAGGGCTCAACAAAAAAAAAGACTACAGTCAACAACAACACCCAGAACCCTGAACAACAGACCAATGCAGCACACAAATTCAGACAATAAATAAGCCTGCCTGTCATTTCAGGTTCACAGTTAAGCTCTCGGTTGCAGGGAGGTACTTATGCTGTGATA--------CTGTACACGGAGGAACAATAGTTAATGGGCTGCACACCAATTACGAAATAAAGCGGCTTTTCAAGGGAAACAACTCAATGGATTGGTGTGTGACGCACTTCGCAGAGAGGTGAGAATATGCTATTTAAACTGGGTACCACTTAAAAACCATCCAAAAAGTGAAGAAGTTCTGATGCACACGAATATCAAGTGCTAAAAATGAGTTCTT------TAAAAACTTATTATTGTTAGCACTTGCCTCTTG--TGAAACTAAATCAAGGGTA----TAGAATGCTAAGCATTTAGGATTGGTTAAGAGTCT--AGGGCAGACAATGCTCA----------AGTTAAATACGGCATGCAGCTATGGGATATGAGCATTCTTCCCGTGCTGCTCCTAACGCTCCTCGATCAATTGCTACAGCACTCTCACCACAGCCTGAGAGCATCATTTACACCCAGTGAGTGCTTGCTGTAAAATGTGTAAAACAAGAAAACCCTCTACAAAGGCCAGCCTCACACAGTAATACTCAGCTCAATTGAGTTATTGTAAAATAAATCAGTGACTAATCCCCAATTGTTAAGGAGCAAATAAGACCATGAAAAGACTGTCATGTGAAGCCCCACACAAATTGTCAATGCTGTCCACAGGGACTCATATTAACTTTGACAAACTGTCTTGGGGCTGATATCTGTTTCTTT-AATGGGATGTATTAGGCACAGACTAAAACATTTGAGATATGCTAAAATGTACAGTATACAGATGTCAAACACAAATACCTATTAGTGACTTCCATTTCTCCCTCACCGAGGCAGAAACACTTCGGAAACAACAAACGGAAGCTTAGATTTTATCAGGACATTTTTGT-TCATTCACAAATATTTTTCACCGATACAATTGGATACCACTAAGT-----GTAATTAAAAT---TGTTTCTTTGAGAATTACTCTGATATGCATTAATTTGTGTGCATCCTTTTATGCCCTGAAGGGAAT-----GGTAAGAGAACGATCTG---------------------CTGAAGAGAGGAGATTATCAGTGCAACACTCATACAAAGGACTTGGCAAAAC------------------AGTCAAGAAACAATTAAAGAAAACAAAAACAAACAGCAGTT----AGAAAAGACtttccttttttttttttcttcttttttcttttttAAATATAAATAGTCTGACCACTTACCATGATATAATTCCTCATCCTTATACTTTGGATTTGGATCATGACTTGTAGTTGTTAGGTAATTATCATGGGCTTTTACCCTTCTACCTTTCTTTGGCTTTTACTGCA------GTGTGCCTATAAGGACATTTACTATATGAAATTATGCCTACT--GAAAATTAATATATACTTG---------AGAATGAGATGC-TTGTATGTTGAAATAAGGTGAAGGTATTAAGTGTATTTCTTTTCACTAGCACAGGAATCTATCCATAACCAAGCTTTTCAGAAATG-TAAGACTACGGGTTTACTTGCTTTACGCCTGTGCTGATTAAAGCATACACGCAACACTTATTTCAAGAGACAGA--AAAGAAGTCCTACCTATACAAAATGAGGTATACGTAGTTAAAATCAAAGTAGAAACTTTTGAAAAGACAGCAAAACCGTTTCTCAAGGGGTAATCTTTTCTATTCAATTATAAAAAAAATATCCAGGAATGTACTACATTGGCAGGCAAGAAATGACAAATCT-----CAAGTACAAATA-----ATTGCCTATTATCTCAAAGGCT--------AAATATTCT---------AATTCC----------TCTTCGAAGTAAAGAAT------------------TTCCT---TCGAAACACTTGCAATAATA-GAGGCTTTAAAAAAAACTT----TACATTTGACAATCATTAATGTACAAACAGAAAAGTGCA---AATTAAGATTTCACACATTTTTTAGTACAAACACAACTTTGATATGAAAAATACTCTCTTTGAGCACAACAAATCACC--CACACAAA----------TGAAGTAGCAAGTAATT---ATTTTAGGTTCATTAAGTATGTATTCTGGCTTGCTCTGTGCACATACATTTGAAAAAAAAAAAAAAGGAAAGAAATTTAAAAAACCAAAGCAAACAACTGAATTACGTTTGCATGTGCAGGCTTTCAGACACTAGCTGGTAATGCTGCCTTAACATTGATATATGACCTTTCTAAGTTACAATGAAAAAGGCTGTTTTTTTCAGCCTAATTAGAACTGTTTCAAATTTTCCTGCTAAATATATGATAGAAAGTCCTTTCAACTTTTTTTTATTATTATTATTCTAGAGTTTCTTTCCATGTCAACTTTGTTCCAATCAAAATATGTTTTGAATTAAATGATTTTGATTCAATATGTGGATCACATTTCACTTCTAAGATTTAAAGTCCAAAAAGGAAAAGTTTAGGCTTTTCAAACAAAGCAAAAGCAGCCACTTTGCGGAAAGCTATTCACATTTACCAAGACTGACAAATTGTTTGTGTGCACCATTAGGTCTAGTTTCTGCAATAGTTGCCAGATTTCCTGTCCTCCTAATAACAT--ATTAACCCTTGAAGTGCTGGCTTTATCTTT----------TGAGTTTTCTCAGTAACCACCAA---TATTTAAAAGCAAGTTACCAAAATGTATTTATATCAGAATCACTAGTTGATCTCTTGAATATACAGCTGAGATTTTGTAAAACTATTAA--AAACTGTTACAAAGATACTGAACTCCAGCCTGCCATGAAGATATCAGGAGGAGGAGGAGGAAGAGAAGAACAGATATACTAAGGAAAAAACTCCAAGTCCTGCATA--AGTT-AATGCAAATTTCAAAAGGATAAAACGTACAAA---ACTTTCTACATGT---CTGCT---GGTTTCTAATTTGTGGCTATATAACTGTGTCCAAGCAGAATGCTACAACTATACCAGATGATATAGAGGTT-TAT-TTAAAGTACTTTACAATTTGTAT-TTTAAAAAACCAAAAAC----AAAACAAAAACCAA-------------------AAAAGAAACCCTACAATATTTCAGATGGAGTAATTATTTTACAGCTTAAGTTACAC--------------AGACAATCTCATTTCCCTTT--------AACTTTTGTTCCCCTAAGTTAAAAATGCTGCCCAGAAGTGCATTGCCAATGCATTTGTCATTACCGTTACAGCCAAAGTTAGCATTTTACCTTATTTCTCTACTCAGTCACCATGATTAAGAAGAAAAAGAACTCTAGAAAATATAATCTTAATAAAAAGGTTTAACTCATGTTTTACACAAGAAGACTGACTGTATGGAACACAGGCTATCGATAATGT--GACACCTCTGCAAGATGAACTTCTTTGCCTGTTACTTTTCTGCGTTTATCAATAAGGGACCAA----------GCAATGAGAATGGAGAATTTTTCTATAATAGTATAACTCGATGAAACACAATTTTGTGCTGAGATACATTTCTGCACAAGTAACATATAAAAAAAGAAAAATATTTTGAAATCTAATGACTCAAAAGCCATTGAGTTTCTGTA-----ACCATTACCAAA-ACAAGAGCGAGTTAGCATAGTGTTTAACTAAAAATTCCAAATACT------TCTTTTGGTAATTTTTATATTCAGTCCACGACCGTTATTTTGTAGCTTAAAATGAAGAAGCCAGACAGCTGTTACGTATTTTATAAAATGAAAGCTACGTTTCCTTTGAAATTCAC--CTTTAATCTTGACTTGAAATGTCTATCACTGGGGGCGGGATTAAAAATG--TAGGTGAA----TACAATAACTTGCCCT 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------..x:....:..x:x..::.----------.x..x.x::..:.....---------------..x...-----...x:x::..:.:.:..xxx.x..xx::..-------.:.xx.:.x:::x.::.:.:.........:--.:.:::::x..x.:x:..-----.....::.-----.:......:...-.x...x.:.......:..x..:.:.x:x..x..x.x:...::...------........:.:xxxxxx:....x...:....::......x.....:..x.....:.xx..:..:x.........::.........x.x....:..:.:.................:--:........::..-....:.x.x...::...x.x..x:::x.x....x.--...:::..----......x..:.x..:. 13M1I41M8I48M21D53M2D267M3I17M9I47M5I15M6I14M4D9M12D8M3D26M12D12M4D17M3D32M3D54M1I77M1I20M1D15M12I16M1I27M8D19M17D15M3D27M1D11M6D17M15D25M4D43M6I13M2I18M13I17M9I13M5I27M3I8M5I9M9D16M3I41M3I74M1I64M2I22M8D18M2I17M8I74M7I4M9I12M6I30M3I9M2I7M6D15M2I16M2D19M4D29M1I5M2D17M10D76M2I66M1I212M1D21M2I50M4I40M9I9M5I27M1D13M10I22M5D11M3D19M3I26M11I7M5D17M21D10M1I11M7I23M18D13M5I23M4D5M24I17M1I15M11I23M8I21M19I32M6D42M2D19M9D12M1D9M15I19M13I10M2I8M6I4M1D5M7I18M10I34M2D20M3I16M16I20M9I32M6I32M1I8M5D12M5D22M8D9M9D6M10D17M18D5M3D20M1D19M4D18M1I20M3D51M1I26M2D8M10D17M3D13M7I40M11I11M8I45M1I132M11I260M2D30M10D23M3D19M9I8M8I22M2I9M5I7M2D23M13I11M39I20M2D4M1D15M11I6M3D13M3D5M3D20M4I30M4I13M1D3M1D23M1D17M4D14M19D9M3I13M2I12M3I14M14D20M8D26M9I5M9I9M48I38M7I16M4I14M5I30M2D21M23I19M10D17M15I6M5I30M7I30M2I18M5I8M5D12M1D45M6D116M2D13M1I35M2D8M4D16M 3043/4382 69.4% 5015/94230402 0.0% 1062/4382 24.2% 116320853 73893702 +26848 chr4 + 190214555 150366619 150366618 150367764 1146 GGCATGGATAGGCCTCACTAATGAGCCTCAAGTACCCTGCAGTGGTTTTCAAACTTAACTGGCTTCAAACGATGCCACCCCATGACAGAATGCAGCTAGCCATAAGAGGAGGGTGATTAGAATAAATGACTGGAGTAATTAACTCTGATGTGAAACCACCTGATTGGAAAAGAGAAGCCAAGAGCTATTTAGCTGATGGTCCTCCAGTAGAAAAAGGAAGCTTTCCCTTTCTCTTGTGTGGGTGTTCAGTTA--GAACTCAACTCTTTCAAGTAGGTATTTGGTAGCACTAATGAAAAGCAGCTTTCATTCAAGGGCCTCTCAAGGGCCTTCCCATTCATTTTGAAAGGGGAAGAAAATAAAAGCTTCAAAGTAGAACTAATTTACTTTACTCC-CCTACCTCTTAGTGAATTTTGCATTAGTGAAGTCTGCATTAGTATTTATGCTAACAAATTTACCTCCAA--ATAACGTCATCAAATACTAAAAATTTTATTTATAGAATAACTAG---ATATTAAGGCTAATTAAAATTTT--------TTAAATTTTCC-----TTTCTTTAAAAGT----------------GTTTTAGAAAACTAAACTTATAATT-----------------TATAATTAATTGTT-GATTAGTTACAGCACTTCCTTTACTCTAGAATGAGGGAGAAGTAAAACATA---AATGGGGTACATCTGTTTTTGAAGAGAAACCAGAGAATAAGGTGGAGGTAAGGAAAGAAAGAACACATATTTTTGCAAAAAGACAGTTTTCTTACAGTGCAAATTGAGCCAAAGAATCCACCACACTCTCTGGCCTGCTTTATTTTATAAAAAGAGGAATTACAAAGACTTGGGGCATTACTGCCTGCTGTTTTACAAGTAATCATCAATTCATTGGGCCAATGTTGTTCTGTACCTGCTGAGTTAATGTTCCTCGGCACACCCCTCCCCCAAAAACAGGTTCACAAGCTGCCCAGTAACAACTACAGCGTAAGTAGCACATGTAACTTAGCAAATGTTTATGCCGAAACTCGGATTTATTTGACAGCTTTACACCTTT-GGGCATGATATAATTAAATGTTTTGACAGCTAAACAAAAACTGTATAAATTTAAAAGCTATT--AGGAGCTCAGCATCTAGAATCAAAATGAAGTAATTTGCTTATA---------CCCTAAGCTACTTTTAGTAA chr4 + 94230402 34041978 34041977 34043034 34041978 34041977 34043034 1057 GGCCAGGAGAAGCTCCACTAATGAGGCTCAAGTACCC---AATGGGCCCC-------------CCCCAGCCGTGCCACCCC------------------CCACATG----GGGTGATAGGAATAAATGGCCATGGTAATTAACTCCGATTTGAAACCATCTTACTGGAAAGG-GAGGCGAGGAGCCGTGCAGCCGATGGGCTCCTGGTAGAAAAAGGAAGCTTTCCTTTACTCTGGTGTTTGTATGCGTTAAAAGAGCTCTTC-CTTTCAAATAGGTGTTTGGTGGCACTAATGAAAAGCAGCTTTCATTCAAGGGCCTC-----------CCCATTCATTTTGAAAGGAGGAGAAAATAAAGGCTTCAAAGTAGAACTAATTTACTTCGTCCAGCCCTCATTTTGGTGAGCCT-------GTAGGGT-TGCATTA--------------------ACCCCAGAGCACAACATCGGCAAAAA--GAAAACCGTGCTT-TAGAATGCCTTTTTCATACGAAGTTTAA---ACATTTTCGTTTGGTTTGGGTTGTGCAGTAGGTTCCTCAACGGCAGATACTCAGGCCTTCGTTCAAGCAATGCAGGCCGCAGCTTCCCTGTTCCATGCCCGCTGCCACGCATTGCCAGCCCGGCTGCAGCGTTTCC----CTCTGGCG-GTGGGAGCTGCGCAACCGAGCCAGCAGTGCCCGCCTGCTGCTGG-----------------------------GAGCAGGACTGGCAGCCTCTGCTGCCTGCAGGCAGCTACGCT-CACTGCACACT-----------TCCTTTGCCATCTCG---CTGCTTTATTTTACAAA--GCGGAATTACAAAGAGCGAGGGTATTACTACCTGCTGTTTTACAAGCAATCAACAATTCATTCTACCAGTGTTGTCCCTTACCTGCTGAGCAAGCGCTTT-------------------AAAAAAGTTCCACTAGCTGCCCAGTAACAACTACAGTAT-GGTACCAGAAGCAATTCACCCGATGTTTATACTGAGCCTCTGATTTATTTGACAGCTTTACACCTTCAAGACATGATACAATTAAATGTTTTGACAGTGAAACGAAAATTGTGTAAATTAGAAAGTCATTAAAGAAGTATAAAACTTGAAATTAAACTGCAG---CCTACGTATAAAACATGATTCCTAAAATGCTCCTAGAAA ...xx...x.:..::..........x...........---.:...x:::.-------------::.x.:.x:.........------------------...:.x.----.......x:.........:.::x:...........:...x........:..x.:......:.-..:..x.:....::.x:...:.....x.::.::....................:..x....x....xx..:.x.:x.x.--..:...xx.-.......:.....:......:...................................-----------..................:.:..........:.........................::::.x-..:x.x.:..:....:::.-------..:::..-.......--------------------...:.x:.--.:...:..:x....x.--:....::x.::..-......:x..xx---...:x...x:...---.x.....--------..:::..x.x.-----x...:.:..x:.:----------------...:x..x..xx:.::.:xxx:x..-----------------.::x.:xx....::-.x:::.:.:....::....----....:.x:-.x.....xx.::x...xx.---.:::.x.:x.::...:.x:..:-----------------------------.::x..:.xx::..xx:x:.x:...xx:x..:...:.x:x:.-..x....x.:.-----------...x:::.xx....x---.............:...--.x.............x:x:...:......:................:.....x.........xx:...:......:.:x...........:x.::.:.::-------------------....x..x.:...x......................::.-:...x..x.x.:..:.:.x.x:........:.:..:x...x.........................:-:.:.......:..................:x....:....:...:......x:....::...--..:..:x:.:x.::.::...:...x..x..---::.:.x....---------:.....:x.:..::...x.. 37M3D10M13D18M18D7M4D62M1D79M2I9M1D56M11D63M1I19M7D7M1D7M20D8M2I16M2D13M1D12M3I13M3D7M8I11M5I13M16I25M17I14M1I19M4D8M1D19M3I22M29D42M1D11M11D15M3D17M2D100M19D39M1D67M1I62M2I30M3D10M9I20M 702/987 71.1% 1057/94230402 0.0% 229/987 23.2% 116324641 73889914 +13645 chr4 + 190214555 150368409 150368408 150368849 441 CATTATCACTCTGGACAGCAC--ATACAGAGTACTGGCTAACAGTCTAAC--AAAAGTTAA--ATTTAAACAGCATCTAAGT-TAGAAC-ATTACTGAAGCATT------TTCAGGCTATGTATATACAAAAACATTTAAAATTTACTTTTCATTATGTAACAA--------------TCTAAGGAATACTGTATCTTCACTAAAGGTAACAACGATCAGTTGTTTATTTAAAAAAACAAATCACTAAAATGTTTGAAAACCAGTCCAC-TTTTCATGTGGATGTTTATATTTCACTTAATCATCCTTCT---TGGAAAGACAGCTCTAAAGGAAGAAAATACTGAGAACCAAATCCTGTTTAACTTACACAAGGTGATGTCAAGTAATTTAAAAAACATATTCTAAAAAGAGCTTCTTCTGTACACATCTAAAGACATTACTGCATTATCTAATTGTTCTCTTCCTCTCACT chr4 + 94230402 34044245 34044244 34044701 34044245 34044244 34044701 457 CATTATCATTTTTGGTAGTATGTATATAAAATGTAGGCTTATTGCTAGACTTAAAAGCTAATTGTTTAAACATTGTATAATTATATAACCATTATTTAAACATTAAAGCCTTTAAGCAAC---TACACTAAAACATTTAGAATCAACTTGGTA--ATGCAGCTGAAGAGCACTGTTGTTCCAAGGCAAACTGTAATCCAGCAAAAGGTAACAATGACCAGTTGTTTAT--------AAAAACCACTGAAATGTTTGGGAACTAGTTCACATTCTCATGCTG-TGTTTATGTTTCCATTTATCATCCTTCTCCCTGAGAAGATAGCTCAAAAGGAAGAAAGAGTAGAGAACAAAATTTTGTTTAAATTACACATGCAGACGTCAGGTAATATAACAAATCGAGACAAAAAAGGGATGC--CTGTGTACAGCTAAAATCATTATTGCATTAGATCATTTTCTCCTCTCTCTCTCT ........:.:.x.::..:.:--...:.:.:.::x....x.:x.::x:..--.....:...--:........x::.x...x.-..x...-....:.x..:....------..:.:..x.:---..:..x..........:...:x....xx:.--...:.:.x:--------------..:....x.x......x:::x:.x...........:..:...........--------.x...:....:.........::...:...:...-..:.....:x.-.......:....xx..x...........---..::....:.....x...........:x::x......x....::.......x.......x.xx..:....:.....x...x...:xx.xx.x......:.x.x.--....::...x.....:x.....:.......xx.x...x.:::..::.....x.. 21M2I27M2I9M2I19M1I6M1I14M6I10M3D30M2D9M14I50M8D33M1I11M1D28M3I104M2D54M 307/425 72.2% 457/94230402 0.0% 48/425 11.3% 116324164 73890391 +13100 chr4 + 190214555 150377340 150377339 150377716 377 GCAACTGTATTCGTTTATGCAATGCTTTGCACATGAAAACCTGGATCTGTGATTAA-GCATTTAAGGTAACACTCATAAAACTATATCATTTGCAGTAAACATGTCTACCAAGTAAATTAAAGGACCCTTATACTATGCAGCAGCTAAAGCAAAGTAGGATTTGATTAAAAGTCCTTAGAAATGGAGGACTGT-TTTAATTCTAGAA------GTGGGGGAGGAGAAACTCATACCCT--------TTAACTGACTACTACAAGTCTTTCT------AAGAACTCCAGCTTTCCAT--AAGACATGTACCCACTTAGGAGATCATAGGTCA-GGTTTTATAAT---ATACTTTATAATTAATATAAAA--AATTAACCATGATTATAAATCAATGCCTCATTTATAG chr4 + 94230402 34050799 34050798 34051202 34050799 34050798 34051202 404 GCAGCTGCATTAGCTCATGTAATGTTTCACACATGGAAACCAAGATGCAAGATTACCTCATTTATGGTAACACTCATAAA-CTACACAGTACACAGTAAACATGTCTACCCAGCAAATTAAAATATCACTGCACTATGCAGCAGCTGAAGCTATCCAGAACCTGTTTATAATCCAATAGAAACAGAAATTTGTCTTCAGTTCTAGAAACAGGGGGGAGGGGGGGGGGAATCAAAGTCTAAGTAAAATAAACTG--CACTGCAAGTGTCACTTGCCCCAAGACTTCCTGCTTCCCACAAAAGACATGCACTCATTCTGGAGATCAAAGGTCACAGCTTTACAATAGAATACATTGTAAATAGGTTCAAAATAATTGAATACAACTGCAAACCAAGGACTCATTTATAG ...:...:...x.:.:...:....:..::......:.....x:...x::x.....x-x......x...............-...:.:x:.x::.................x..:........:x.:.x:.::..............:....x.xx:..:.::..x...x..x:.xx......::..::x:...-..:.:........------.x.:...:..:.::.x...x.x:..--------.x.....--:...:.....x.:x..------....x:...x....:...:--........:..:..:.:x........x......-:.:....:...---....x..:...x..:xx.x...--....:.x:.::.:.::...:...x.x........... 56M1I23M1D112M1I13M6I25M8I7M2D16M6I19M2I33M1I11M3I22M2I37M 269/374 71.9% 404/94230402 0.0% 33/374 8.8% 116326541 73888014 +3649 chr4 + 190214555 150379174 150379173 150379245 72 GCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCCAGAGAATCGTTTGAACCCGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.::..........::........x..x.x...x.::........:.:..x:xx:..:..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 74345968 NA +3513 chr4 + 190214555 150403491 150403490 150403591 101 CCATCTTTTAACTTTTTTTATTATAAAAAGTATCTCTCTCTCTTTCTTCTTCTTCTTCCCCTTCTCCTTTCCCTTCTCCTTCCCCTTCTTTTTTTTAACTT chr4 + 94230402 9833029 9833028 9833119 9833029 9833028 9833119 91 CCATCtttcttttttttttttt----------ttttttACCATATTCCTTTCTTCTTCTCCTTTTCCTTTGTTCTCTCCTTCCCGTGCCTTTCTCTAATTT ........:xx:.......x..----------.:.:.:x.:x.x.::::.........:....:......x:::..........x.x.:...:.:...:.. 22M10D69M 63/91 69.2% 91/94230402 0.0% 10/91 11.0% 140570462 49644093 +3215 chr4 + 190214555 150403515 150403514 150403578 64 AAAAAGTATCTCTCTCTCTTTCTTCTTCTTCTTCCCCTTCTCCTTTCCCTTCTCCTTCCCCTTC chr4 + 94230402 74430671 74430670 74430734 74430671 74430670 74430734 64 AAATATAATGTCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTC ...x.xx..x..::.:.:...:.:...:..........:.:....:..:x....:..:..:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 75972844 NA +35150 chr4 + 190214555 150411454 150411453 150412019 566 GTCAGTTAATTAATTCTCTGATCCCCTGCTACCAACCGAGTATTGTATAATCTGTTATTATTCACTGTCCTATAGATCATCTGTTCTTGGTGCTGGTTTGTTCCAGGAAGAGGGACAGCTGCAACACTATATCCCTGTTCAACCTGAGGACCATCTGACTTTAATTGTAACACACAGCTTGATGTGGCTCTGGCTATGAGAAGCCGAAGTATCGT-CTGTAATAATCTGGAAAAGCAGAAACCTGCCAACAGAGGGCTGAAAACAGGGATTGTGCTGTCTGGCTGCCTGACGGGCTGCAGGAAATATGATTAATGAGTAAGGTATAATGATATCAGGAACCCGATTAGCACCACAAAAAGGTCACAGATCAAAGTAGTATGCATTTCATGAGCTGCAATCATTGCATAAAATCTGTGGAATTGAAGTGGTAAACCAAAAAGAGGAGGGGGATGAAACTCT-TATGTGACAATATGCTAACC-AATACATAAGATACAATACTAACAATTTAGTCACTTGT-------AGAAAGTTAAAAAGAAA---TTACAAAATGAATCAATATAGACTATATTGTA chr4 + 94230402 34065912 34065911 34066484 34065912 34065911 34066484 573 GCCTGTCAATTAATGTTCCAGACCCCTGCTACTGACCCAGTACCGTACAAGCTGTTATTATGCACTGTCCTACATATCATCTGTTCCTGGTGCTGGTCTGTTCCAGAAAGACAGACAGCTGCAACAGTATATCCCTGTTCAACCTGAGGACCATCTGACTTTAATTGTAGCACACAGCTTGATGTGGGTCTGGTTATGAGAAGCCAAAGTATCACACTGTAATAATCTGGAAAAGCAGAAACCTGCCAACACAAGGCTGCAAACAGGGCTGGGGCTGTCTGGCTGTCTGACGGGCTGCAGGAAATATGATTAATGAGCAAGGTATAATGATATCAGGAACCCGATTAGCACCACAAAAAGGTCACAGATCAAAGTAGTATGCATTTCATGAGCTCCAATCATTGCATAAGATCTGTGGACTTAAAAAGGTAAACTGAAATGCAAAGGGAAAAAAATATCTGTGTGTGATAGCTTACAAAATGAGCGCTTAAAATACAATAATCACTATTT------TTGTCTGAATCAGGAAGCAGTAAGGAAATATTAACTGAATGAATCAGCCAAAGCTGCAGTGTA .:.x..:.......x:..:::x..........::...x....::...:..x..........x..........:.x...........:..........:........:....x:.............x..........................................:.................x.....:...........:.......::-...................................x.:.....x........x.x.x............:...............................:............................................................................x..............:.........x..:..:x.......::...x.x::....::.x:..xx...-.:.....:.::x.:.x..x:-.:::.x...:........x.x..x....------....-------..:...:x:x..:....---.x..x:.........::xx.::..::.x.... 215M1I244M1I20M1I28M6D4M7I17M3I32M 468/560 83.6% 573/94230402 0.0% 19/560 3.4% 116345542 73869013 +14290 chr4 + 190214555 150415397 150415396 150415627 231 CAAAAGCT-CATGACAGACAGAGTAGATGATTATTATCTTACCAATCTGTTTATGTGAACAAATTCTTCTGAGGTTTTGGCCCAAGGAGGAAGTTCGACATCAGACACTACTGTCCCATCATCCATCACTCCAAGATTATAATTATTGAAGTTGACAAACATCTCAGGGAGATAATAAAATTCAGGGATCAACTCCTATATAAAAATAAAAGACAATGTGATATTATAAACT chr4 + 94230402 34069264 34069263 34069490 34069264 34069263 34069490 227 CAAATGCTACTTGACAGAAAATAGAGA-----GTCATCTTACCAGTCTGTTTATGCGAACAAATTCTTCTGGGGTTTTGGCCCATGGTGGAAGTTCAACGTCAGACACAACTGTTCCATCATCCATCACTCCTAGATTGTAATTGTTGCTGTTGACAAATATCTCTGGGAGGTAATAGAATTCAGGAATCAATTCCTGTATATAAATGAAAAACAATGCCATGCTATAAATT ....x...-.x.......x.:x:x...-----:.:.........:..........:...............:............x..x........:..:........x.....:.................x.....:.....:...xx.........:.....x.....:.....:........:.....:....:....x....:...:......:x..::......:. 8M1I18M5D200M 188/226 83.2% 227/94230402 0.0% 6/226 2.7% 116346133 73868422 +18673 chr4 + 190214555 150416082 150416081 150416712 631 ATTTCAAAACGGTCAAGTTTAAAGATAC----CAACTCTGATAGAAGA-TCAAAATTTAAAATTAGTCTAGAAAATGACTTGCATGAGAAACT----GAGTAAATTCAATAT--------GTAACTTTAA---TAATGACATTTAATAAGCAGAAAAATGCA----GCTGCT----TAGCCTTTTGTGTGTAATAAACCCCATATATAACTATTTCAGAGGCTCTGTAGATCAGACTTGAAATCCAGTCTTGACATGGGTCAGTGGTTCAGTGGTCTTTCAGATATCCCCTCAGGGCCAGCAATGGCAGGCCCGGCTTTCCAAACAGTTGAGTAAAATAGGGAGGTCATCAGATTTTGGACAAGGTCAGTATGAACTTGCCAGAGCAGAGAAA--AAAAATCCAGCAGGAATTAAGCTATTATCACCTCCATGATCCATGTGAAATGTTGCCTGACTTTGAATTGTACATC-CTTTGTTTACAATCACATTAATTAACTAAGCAGGGTAGAAACGAGCTTGTTCTTCCAAATGGCTGACAACCACCTGACCATTAGACTTAAAAAGCATTTTAACTGAACAATTAAAAAAAAAAAAA--GACCTTATTTAAAGCTTAGCTATAAATAAAATTAGATTATAATCACACAAAAATTTTAAGATTCT chr4 + 94230402 34070776 34070775 34071422 34070776 34070775 34071422 647 ATTTTGAAA-AATCAAATTAGAAAATTTACTTCCACTGTGAGGAAAGAATCAATATATGTAATTGCTTCAGGAAGTCTATTTCATAGAAAACAACTAGTGTAAAATTGGTCTTTCGTATAGCAACTGCAAACTGCATGCTGTTTAAGAAGTAGAAAAAAAAATCAGACTGTTCCACTGGCCCTTTCTAC--AGTGGGTGTAGTACATAGCTCCATCAGAAGCTCAGTAGATGAGA-----AACCCAGTCCTGACACGGGTCAATGGATCAGCGGTCTCCCAGATAGCCCCCAAGGACTAGCTATGGCATGAGCAGCTTTCCAAAAGACTGAGTGCAATAGGGAGGTCATCAGATTGTGGACAAGGTCAATCC-AAGTAGCCAGAGCAAGAACAGGAAAGATCAAGCAGGAATTAAGCTATTATCACCTCTATCCT-TGTGTGAAATACTGTTTGGCTTTTAATTGTACATCTTTTTGTTTACAGTCACCTGAATTAACTAGGCAGGATA-AAATGTGCTT-TTGTACCAAATGCTTGACAAGTACTTGATAAAAAGAGATTTGAAAC-TATTAACTGAAGAAGTGAAAGAGCAAAAATGTGCCACAGATAAAAGTTTGCAAGAAAGAA----AGATCACTATTGTAGAAGTTTCTGCAGATTTT ....::...-::....:..x:..:..x:----.x...x...x::....-....x..x.:x....:x.::..:..:.xxx..x...:::....x----.x.....x.:::.x.--------.:....x:..---xx...x::.....x...:.......x:x.----:...:.----.:...:...x.::--.:.::::x:x:..:...:..x:x.....:....x......x...-----..:......:.....:......:...x....:.....::......x....:x...:.:...x......x.xx.:..........x:::.....:x....................x............:.x:-..x.x.........:::.x.--...:...x..........................:..xx.-::........::..::..:....x...........-:..........:....x.x.........:.....:..-...:.x....-..x.x.......x:......x:..:...:x.xx...xx.xx:..:.-.x.........x..x.:...:.:x.....--x:..x:.xx....:x..x..x.x...x..----....:.:x..:::.x..:xx.:.xx.....:. 9M1D18M4I16M1I44M4I15M8I10M3I29M4I6M4I13M2D44M5D132M1D20M2I40M1D35M1I37M1D10M1D46M1D29M2I29M4D32M 433/614 70.5% 647/94230402 0.0% 50/614 8.1% 116345306 73869249 +10117 chr4 + 190214555 150425148 150425147 150425659 512 AGATGAAATGTAGTAACAGAGTCAAAGATTATGCCTTTCTAATACTT---------TTAAT-GCACATTTACA-AAGTGAAGTATGTTTTATATTCATCAGAACAGAACAGTCAGCTCTGGATAAAAAACACATGTTCAGCAATTCTTTA-AAACATCAGTG-GAAAATGATAAGTAAACAACACTGACAGAAG-ACAGATACATTTACAATTCACGTTTTCTTCTGGCTTGCTCAAAATAATTTTAATCTCTATCACTTAATTAGGTAGATGGGTCTTAGAGGCAGGTAACATGGCCAACATTTAGTGTATCATCTCCTAAGATAAAAATTTGAAAGGTTCAACCAGAGGTTACACCACAGTTCAGGATAAGCTCATTGCTTTGATCACAAATCCCAAGGCTTTCATGGCATAATGACAAGGATTGGTTGTGACCACACATATGCTTTAGTTTTCTTTATTAAGGTATAATTTCCACTGATATGAACAACCTTTGCAGCCAGGCTGTATGA-TTCTCCTTTTAATA chr4 + 94230402 34076245 34076244 34076721 34076245 34076244 34076721 477 AGATGCAAT----TAAATGAGTTAAAGATCATGCCTGTCCATTACATAGAAGGTACTAAATAGTACTTTCACAGAATTAAAACACAGTTAGTAATTTTCAGAGCAGAAAATTTA-----------AAGACAC-------TCAATACTGTACAGACATGAGCGCTAATCTAACTAGTAAATAACAATGATGGAGGCACTAGTAAAATTTCAAAGAAC------------------CAATGCAATTTTG-----CACTGCTTAAATAAATGGATAGGGA--AGAAGCAG--AAAATGAATTTTATGCAACACACCACCTCTTGAAATCAAAAGTTTAAAAGTTCAACCAAACGTTATACTACAGTGCAGCATTAGTTTCTCACTCTGATCATCAAT-CCAAGGCCTTCACAGGTTATCAGCAAAGACTGGATATGACCACACATACGCTTTGGTTTTCTCTGTGGAAGCGTGGTACCAGCCAACAAGAGCTGCTTCCGAAGATAGCTCATGTTAGCTCTCCTTGTAATA .....x...----...xx....:......:......x..:.x...x.---------.x...-.:..x..:...-..x.:..::.::x..x:..x.:x.....:.....x.x.:.-----------..:....-------x....x..x..-.:....x..:.-x..xx.:.:x......:....x...::..:.-..x::..x.x..x...xxx..------------------...x::......:-----:.:::.....x..::.:...:..xx--...:....--..x...:x:xx:..x:.::::.:..:...:.:.:..x....x..x...:.........:.x....:..:.....x...x..x..:.:x.::..:......:x...-.......:....::.xx..x:::...:..:...x.:............:.....:.......:.:.x:.:.::.::.x:.x:.::.:.x..:.x:.:.::.x..x:..x:::.:.x.-:.......x..... 9M4D34M9I5M1I11M1I40M11D7M7D11M1I11M1I31M1I21M18D13M5D25M2D8M2D105M1D117M1I14M 304/462 65.8% 477/94230402 0.0% 65/462 14.1% 116348903 73865652 +28053 chr4 + 190214555 150435582 150435581 150436332 751 TCTGTACCTTAATATCAGAGGTATCACGCTGACTGTTTCGCCAAGCTCTGGAAATTGATGAAAAAGTTCGATCTGCATGATCAAATTTGCCTCCTTGCAAATTTAGGAAATAAGTTGTAAAGGGTTCCTAAAAA-----------ATAGCAATTAAAAAAATCCATATGTTCCCTCAGGCAT------AAAAATGTGGTTTTT----------ATAAAT--------------TCTTAGAACTAAATACTTTAATGACTAATAGGCATTCACTAGTAATATAAACTAGGTATATAATGAGAATTATATCTAAATTATTACATTAATGTTCTCAAG-------TTATTTTTCCCTCAA---------------------------------------AAGAAATATTTCTAAATAT-------------------------TTCAAAAATTTGGTATTTGCAACATTTTCTTCAGGTAGCCTTCCTTTCCAAGAATAATGTATTAATATCATACAGACA------TAAATTAGATGTATTTTCTTCATAGTACAGGGAATAGTCCAGTAT--GTAGTTTTCCTATTGTTATGGCTCAATATTTAATTTATGATTAAGAAAAGAAAAATGTTTGGATGATTTAAAAGCCTCCTCTTAGTTAAAGAACACTTAAACACATATTAGTGGATAATTGCTTGAAATTAGCTAAGCACTATAAATTACTTCTAGGATTTATGTCTGCCTGTATCCTTCTAACAAGCTTTAATTAATGATGTGCTGCTAATGCTTTTCCGAAGAAATTGCTTTCTAGTAGATGAATCACCTTTCAATTTCACAGAAACATTTCTTGTTTAACCAATATATTATCAATAC chr4 + 94230402 34077493 34077492 34078328 34077493 34077492 34078328 836 TTTTTACCTTGATATCAGAAGTGTCACGCTGACTGTTGCGCCATGCTCTTGAAATAGATGAAAAGGTTCTATCTGCATGATCAAACTTCCCACCTTGTAGGTTTAGGAAAAGTGTTGTAAAGGGTTCCTAAAAACATTTTAAAAAACAATAATTAAAACAG-CAACATATTTCTTTAGTAATTTCAGGAAATCTGTAATTATTTTCTGGTTAGGTTAATACCGATGCTGTTCTTCTGGAAGATACATGCTT-AATCACAAAAAG-------TTAGTTCTATTATCCAAG-----AGTGAGAAATACA---AAATTAT---GTTTGTTTCTTCAAAAAATTATTTAATTTCTACTCAACGCACATAAATACAGATACAGAAAAGCAAATGTATATGAAATAAATATT-CTAAGTCTGGAGGAGAAGCCACAATTAATTGCTTTCAAAAATATGAGAAGTTCAATATTTTCACC---TAAGGTTTTCTTAAAAGGAGCATGTA--------ATACATACACTTTATTTTGTTAAAGGTACTCTATTAATA-TAAATGGCAGCATTAAATACTGATAGCTTTATGATTGTTATTGTTAAATATGTAATTTGTGATTTAGTAAAGAAAAATGTTTGAGT--TTTTAAAGCCTCCTCTTAGTTAAAGAACACTTAAGCACATATTAGTGGATAATTGCTTGAAATTAGCTAAGTGCTATAAATTACTTGAAGGATTTATGTATGCTTGTACCATTCTAACAAGCTTTAATTAATGATGTACTGCTAATGCTTTCCCAAAGAAATTACTTTCTAAGAGATAAATTGCCATTCAATCTTATAGAAAAATGCTTTGTTTAATCAATATATTACCAATAC .:.x......:........:..:..............x.....x.....x.....x........:....x...............:..x..x.....:.::.........x:x.....................-----------.:.::........x.:-.x.:..:..:.:.:..xx..------...xx...::..x..----------:.x...--------------...x::.:x..x..:...-...x..x..x..-------:....xx...x.x.:.:.-----.:......x..:.---.......---:..x:.x.::....:-------...x...::x.....---------------------------------------..x.......-....:.x.-------------------------.........x..:x.xx.x...:......x:.---..:xx..:::..xx...:.xx.....--------.....x...------.xx:...:.x...:.:.x..x...-..x.x..x.xx:.:x.:..:--:...:...x:x........x.:.x.....x......:.....x..x...............::.--...x..............................:....................................::.............xx...........x...:....:.x..........................:.............:..:........:.......:x....:...::..x......:.:.:.....x..x::........:..........:...... 134M11I16M1D20M6I15M10I6M14I18M1D12M7D18M5D13M3D7M3D15M7I15M39I10M1D8M25I32M3D26M8D9M6I24M1D20M2I64M2D234M 559/716 78.1% 836/94230402 0.0% 155/716 21.6% 116358089 73856466 +11416 chr4 + 190214555 150436715 150436714 150436932 218 TGAACTTACTATTCTTAGCAGCCATGCAAGAACAAAACTTGCAGTTGAGTAATGAGTACCATAGTGAAACTTTGGAACTTGATCATCTTCCCATGATTCATAACGCTCAGCGAAGAATGCTGCTCTTTTTGGGTTCAGAGCTCCTATTGGCTGCCAA-----TAGGGA-------GGGAAAAAACAAAGAATACATCA-------ATGTAATCATCCTTCATGTCTTCCTCTCTTCT chr4 + 94230402 34079272 34079271 34079506 34079272 34079271 34079506 235 TGTACTTACAATTCTTAATAACCATGCGAGTGCAAAACTTGCAGTTGAATAATGTGTACCATAGTGAAACTTAGGAACTTGATCATCTTCCCATGATTCATATCTCTCAGCAAAGAATGCTGCTCTCTTTGGGTTCAAAGCTCCAATAGGCTATAAAGTTTGTAGAAATAAATATGTAAGTAAATAAAGATAACAGCACGTAATTATATAATCA--CATCATACTTCCCACGCTCTT ..x......x.......::.:......:..x:................:.....x.................x.............................x.x......:..............:..........:......x..x....::x..-----...::.-------.x:.:x...:.....xx...x..-------..:......--.x....:::.:..x.x..::. 157M5I6M7I23M7I9M2D21M 175/216 81.0% 235/94230402 0.0% 21/216 9.7% 116357443 73857112 +59117 chr4 + 190214555 150438896 150438895 150439967 1072 AAAAATCTT----TAATTACCATTTTAAGTCAGTTTCACAGTAAACTAATTTAAAATGCTATCTTTT--AAAGCATTAGTTTCTGTACAAAAGAATCAT-ATCTGACTTACTAAATATGTGCCAGTTAAGAATGGAGCTGACTCCAAGGATTCTTTCTTTGTTACA-GAACCAATTTGAAATGCCTTTAAATGTATTTTAGTTGTTGTCCCTAAAGAATGAGCCATG---GAAAAGAAAAGAGAGAAGAAATAAAATCACTAGAAGACAAATTATATGAATTAAAAATAGAATCAATGCTCCTTTTGTATGGT-CTGAAGCATAATAAGTATTCACTTTATCTGCTCCTATTTTTATTACTCTCCAAATGAGTAACCCCCAAAATCAATAGTTATAGAATCACGTTTCTTGAATATAATGCTAAAACCAATTAGGATTGATTTCACTAGCATCTGAAAAAAAA---------TGGCATCTTGCAGAGATCCATATTGGTAGAACCCACAGTATTGATTTTGGCTGTTATTGTTACAGTTGGTTTCTGAAGCCTGCTATACGACAGCTATCAAGACATACCACGTTTATTTGCAAGCATATAAAAAAGAAGTCCCCAAATAAAAGAAAGTT----AAAAAAAAAAGACCAGTGGAGCTGTGCAATGACAATGATACACTATCAGCTTACTCAGAGAAGTTACAGTGGGAATACACACATTGAATTATACATTACGCGAAAGCACTGATTTATTGTGGTAATAACATCCACCTCATTAAAAGATTCTGCTTTGCTGCAGTTGGAAGGCTACATATTGTTTACTGCTATAAATTAATGGCAGTGCAAAGAAGACTGTGGAACCATCCTAACAATAGATCTGTAATGACAGTGCTGTATATCACAGCTTCCTCAGCAGCTTCATAATAAAATGGAGACAATGTATTGAGCTAATACATTCTACCATGCTGGCCCACATTTTTCTGACAACTGCTTTAAAAGATGATCTGAATTCAACTATGTTATAATGCTGCA----AAACATTTAACTAAGCAAGAGTCAGTCATATACCAAAGTGCATCAAAGCATTTTTAAAACATTGTCT chr4 + 94230402 34080687 34080686 34081755 34080687 34080686 34081755 1069 AAACATCTTAGGTTAATTACTATTTT----------TGCAGTTCACTAATTTGAAATATAACCCTTTTAAAATAAGTGGTTCTTGTATAAAAGGATTTTTATCTGATTTAACAAATTTATTCCAGGGAAGAATTAAACTGACTCTAAGTAGTCTTT--TTGTTGCAAGAACCATTCTGGAAT--CTCCATCTGTACTG-----ATTTTCCCTAAAGACTCAGCTATGCTTGAGGGGAAAAAAAAGAAGAAAGAAGGTCATCATTAGACAAATTATATGAATTAAAA-TAGAAACAGTGTTG-TGATGTATGGTTCTGTAAAAATTTATGCTTTCTCTTTATCTGCCTCTATTTTTATTACTCTCCAAATGAGTATGGCTCAAA-TCAATAGTTATAAAATTACATTCCTTGAATATAAAGCTAAACACAATTAGAATTGATTTCATTTTCTTTTCAGAAAAAAAAATAATAATGGCATCACACAGAGATCCATATAGCCAGAATCCACAGTATTGATTTTGGCTGTTATTGTTACAGTTGGTTTCTGAAGCCTGCAACAGGACAACTATCAAGACATGTCACATTTATATGCAAGCAAATAAAAAAAA--TCCCCAAATGAAAGAAAGCTTAGGGAAAAAAAAAGAACCATGGAGCTGTGCACTGACAATGATACACTATCAGCTTACTCAGAGAAGTTACAGTGGGAATACACACATTGAATTATACATTACACGAATGCACTGATTTATTGTGGTAATAACATCCACCTCATTAAAAGATTCTGCTTTGCTGCAGTTGGAAGACTACATATTGTTTACTGCTATAAATTAATGGCAACACACAGAAGACTGTAGGACCCTTCTAACAATAGATCTGTAATGACAGTGCTGTATATCACAGCTTCCCCAGCAGCTTCATAATAAAATGGAGACAATGTATTGGGCTAATACATTCTACCAGGCAGGCCCATATTTTTCTGACAACTGCTTTTAAGGATGAGGTG-ATTCTAGTGTATTACA---CTGCACTGTAAACAGTTAACTGAGCTTG----AGCTACAGCATAAAGCACAAATAAGCAATATTTGAATATCCTCT ...x.....----.......:.....----------::....xx........:....::x.:.:...--...xx.x.:...::....:.....:..:x.-......:...x:....x.:.x....xx......x:.:.......:...x.x.....--.....:..-......x.:..:...--..::.xx....:.x-----:..x..........x.x...:...---..:::.....:.:........x..::...::.xx......................-.....x..:..:.x-.xx........-...x.:x.xxx..x.:x...x..........::...........................xxx.:....-............:...:..:..:...........x......xx.......:..........:.xx.x.:.x.:......---------.......x::.............x.x:....:...................................................x.:.x....:............::...:.....x........x........:.--.........:........:.----:...........x.x:............x......................................................................:....x.................................................................:.................................:::..x..........:.:...x.:............................................:...................................:.................x..x......:....................x..:.....xx..-....x.x.:.:...:.---.....----.....x......:...xx.----..::.:.xxx:....::..xxx.....x.x..x:..:..:x... 9M4I13M10D31M2I30M1I56M2D8M1I15M2D14M5D24M3I56M1D14M1D11M1I69M1D79M9I136M2D20M4I371M1D16M3D5M4I19M4D44M 868/1040 83.5% 1069/94230402 0.0% 61/1040 5.9% 116358209 73856346 +3186 chr4 + 190214555 150443838 150443837 150443900 63 AAGTATAATTAAAAAAATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTAAAGCCA chr4 + 94230402 23063158 23063157 23063220 23063158 23063157 23063220 63 AAGAATACTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTTACAGCCA ...x...x..:x..xx..............:.:.:.x.x.x.x..............x..... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 127380680 62833875 +3327 chr4 + 190214555 150443851 150443850 150443896 46 AAAATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTAAA chr4 + 94230402 24792623 24792622 24792668 24792623 24792622 24792668 46 AAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAA ..:...................xx........x.........:... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 125651228 64563327 +3088 chr4 + 190214555 150445326 150445325 150445400 75 GGTTTTAATTTCGGAAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAT chr4 + 94230402 26578244 26578243 26578318 26578244 26578243 26578318 75 GGCTTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGT ..:...:x.:.:..x..x.:xx.:...................:.:.:.:.:.xx:...:...:.x.:..::.:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 123867082 66347473 +3562 chr4 + 190214555 150445347 150445346 150445443 97 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATACATATATACACACACACATATATATATGTTGT chr4 + 94230402 4618357 4618356 4618436 4618357 4618356 4618436 80 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATAT---------------TATATGTTGT .::.x.......::..............x:....::......x.x......-:....x......-:......---------------.......... 51M1D12M1D7M15D10M 66/80 82.5% 80/94230402 0.0% 17/80 21.2% 145826990 44387565 +3523 chr4 + 190214555 150445350 150445349 150445441 92 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATACATATATACA---CACACACATATATATATGTT chr4 + 94230402 60831530 60831529 60831624 60831530 60831529 60831624 95 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATT ...x.....x.............x.x.x.....:.:....:.:.:.:::.:.:x.x..x......x....::---::::.:...:.:.:...:.. 72M3I20M 62/92 67.4% 95/94230402 0.0% 3/92 3.3% 89613820 NA +3165 chr4 + 190214555 150445352 150445351 150445421 70 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATACATATATACA chr4 + 94230402 60831530 60831529 60831599 60831530 60831529 60831599 70 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATA ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x.:.:..x..:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 89613822 NA +3271 chr4 + 190214555 150445354 150445353 150445418 65 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATACATATAT chr4 + 94230402 60831530 60831529 60831594 60831530 60831529 60831594 65 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACAT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x..x...:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 89613824 NA +3148 chr4 + 190214555 150445356 150445355 150445520 165 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATACATATATACACACACACATATATATATGTTGTTTTGCTCAACGCTGAGTTGGGAAACTGTGTGCTTATTGTTTAGCTTAAGCCTGGGCTAATGGCACTAAATATTTCAA chr4 + 94230402 60831530 60831529 60831662 60831530 60831529 60831662 133 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGT--------------------ATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCA----------TGTGTGTATATTTCTCA--TAAGATCTGAACTATGAGCTTAGAATGTTTAAA ...x.....x.............:.:.......:.:.--------------------...:.:....:.....x.x..x...::..xx.x..x..x::..xx.----------......:x....x:.:.--.x.:::...::...xx:..x:x:...:...x.. 37M20D46M10D17M2D33M 90/133 67.7% 133/94230402 0.0% 32/133 24.1% 89613826 NA +3650 chr4 + 190214555 150448662 150448661 150448761 100 CATGGTGGCAGGCACCTGTAATACCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGAAGGCAGAGGTTGCAGTGAGCCAAGATCATGCC chr4 + 94230402 76033197 76033196 76033288 76033197 76033196 76033288 92 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCC ..::....:--....x....:.x...........::........x.xx.x...x::..............x:xx:..:..:..------..x..x..... 9M2D72M6D11M 68/92 73.9% 92/94230402 0.0% 8/92 8.7% 74415465 NA +3193 chr4 + 190214555 150448785 150448784 150448857 73 AGAGTGAAACAG--TGTTTCAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAGAAGAATCTGCTA chr4 + 94230402 57721079 57721078 57721153 57721079 57721078 57721153 75 AGAGTTAAAGAGACTTCTTCCAAAAAAAAAATAAAAAGGGGGGGGGGGGGGAGGAAGGGGAGGAGTAAGGTGCTA .....x...x..--.x:...x..........x.....:::...........x..:x:..:.:..:x..xx..... 12M2I61M 54/73 74.0% 75/94230402 0.0% 2/73 2.7% 92727706 NA +3310 chr4 + 190214555 150448792 150448791 150448845 54 AACAGTGTTTCAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAG chr4 + 94230402 86378665 86378664 86378717 86378665 86378664 86378717 53 AGCAGT-TCTTGAAGAAAAAAAAATAAAATAGGGGGGGGGGGTGGGGAGGAAAG .:....-.:.::..:.........x....x................x....... 6M1D47M 45/53 84.9% 53/94230402 0.0% 1/53 1.9% 64070127 NA +11260 chr4 + 190214555 150457847 150457846 150458130 284 TGCTATGCAAATAAAACA-ATTCATTTATAAATA--ATAATAAATAGTCACTCCACATCACAGTAACTTAGCATGATTAGAGAATAAATACTTAACTTTGAGAAGGATTACTGACTGGCAGTGTGTTGCTGGTATATGTCAGGATTATTCATCACCCTGACAGTAATATTAACCACAATCCATTTCAGTTGCTTCAGTTTATCATTTTCTGACTAATGTTAAAAAACAATGTCTTTGGAGGCTGCTTGAATTAAGTGTAGAATTAACGT--CTGTTAGAGTCATTCAAA chr4 + 94230402 34091791 34091790 34092072 34091791 34091790 34092072 282 TGCTGTATAAATAAAATATATGCGGCTATACATACAATATGTAATACTCTTTCCAAACCATAGTGACCTC------TTCAGAAATAAACACTGAAGTCAAAGCAGGGTAACAGACTGGCAGTGTGCTCCTGGCATTTGTCAGGAGCGTTTGTCAGACTGACAGTAATATTAACCACAATCCATTTCAGTTGCTTTGGTTTATCATTGTGTGACTGATGTT-CAAAACAGTTCCATAAGAAATTGCTTAAATAAAGTGTTGGTTTAACCTACACACTACAGTTCTTCAAA ....:.::........:.-..x.:x:....x...--...xxx....x..x:....x.:..:...:..:.x------..x:::......:...x..x.:x:..x...:.x..x.............:.x....:..x........x::..::...xx......................................::..........x.x.....:.....-x......:.x:.x.x:..:::.....:...x......x.:x.....x.--x:::..x...:x...... 18M1I15M2I34M6D144M1D48M2I18M 203/277 73.3% 282/94230402 0.0% 12/277 4.3% 116366056 73848499 +7474 chr4 + 190214555 150467667 150467666 150467800 134 AATTACCTTGGACAAATCTCTGAAGTTGGTGGGCAAGGTAAGATCCAGTTCTTCTGATTCATAATTAGTGATGACCCAAGGAAACACTGGATACTGATTTAAGTCATTATAACTCCGTCCTGATAGGGAAAAAA chr4 + 94230402 34094791 34094790 34094924 34094791 34094790 34094924 134 AAATACCTTTGACAAATCTCTGAAGTTGCTAGGAAGCGTAAGGTCCAACTCATCTGATTCATAGTTGGTAAGAACCCAAGGGAAAATAGGGTACTGATTTAAATCATTGTAAGTGCGACCTGACAAACAACAAA ..x......x..................x.:..x.:x.....:....::..x...........:..:..:.x:........:..x.:x..:...........:.....:...x.x..x.....:.::x..x... 134M 103/134 76.9% 134/94230402 0.0% 0/134 0.0% 116372876 73841679 +9324 chr4 + 190214555 150471615 150471614 150471762 148 TTAGGTTACCTGCTATCGTGTTGAGAAACATCAAGTACTCAAAATTAGATATCTCTCTGTGTTGCCATCGCTGGGTCATATTAGAAGCCTTAAAAAGCTGACGTGGACTAGCTAATGAAATACGTCTGCAAGAAAAAGAATTCAATGT chr4 + 94230402 34096501 34096500 34096646 34096501 34096500 34096646 146 TTGTGTTACCTGCTATTGTGTTTAGAAACATCAGGTATTCAAAGTTGGAAATTTCTCTGTGTTGCCATCGCTGGGTCATATGGGAAGCTTTGAAAATCTGTCGTGGACTAGCCAAAGAAATGCGTCTG--AAAAACAGAAGTAAACAT ..:x............:.....x..........:...:.....:..:..x..:............................x:.....:..:....x...x...........:..x.....:......--.:...x....x.x..::. 128M2D18M 121/146 82.9% 146/94230402 0.0% 2/146 1.4% 116375114 73839441 +3014 chr4 + 190214555 150483477 150483476 150483552 76 TGTCTATTTCTCTTTTTTCCTTTTTTTAAGTTAAAAAAATAGAGATGGGGTCTCCCTATGTTGCCCAGACTGGTCT chr4 + 94230402 24124693 24124692 24124768 24124693 24124692 24124768 76 TGTTTTTTTTTTTTTCTTACTTTGTTTCATTCAAAAAAATAAAAACATTATTTCCCAAGGTTCTCTAAACTGGACT ...:.x...:.:...:..x....x...x.x.:.........:.:.::xx:.:....x.x...x:.:.:.....x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 126358784 63855771 +7390 chr4 + 190214555 150487665 150487664 150487850 186 ATACTGGTTAATT--ATTATAACTATTAAGACACTTTACTTTCCC-----TAAGTTTCTCATATAAAACAGTACCTGGTTTGAGGCAATCCAAAACTTGTTCCAACGCCAACACGAGGTAGATAGTTAACCACTTTCTTTACTGTTGCAGGGTCTGGGAAGTTGAACATCACAGCAACTAC-AACAGATGATTT chr4 + 94230402 34097466 34097465 34097659 34097466 34097465 34097659 194 ATACAGGTTGGTTTGATGAAAAAAATAAAAACACTTAGACCTCACAGATATAATTAACTCAAATTGTTGAATACCTGGTCTGAGGTAGTCCAAAGGTAGCCCCAATACCAACCCGAGGTAGACAGTTAACCACTTTCTTTACTGTTGCTTGGTCAGGAAAGTTGAACATGACACCCACTGTGAACATAGGAGTT ....x....::..--..x.x..xx..x..:......x:x::..x.-----...x.xx....x..x:xxx.:........:.....:.:......:x.x.::....::.....x.........:.........................xx....x..:...........x...x.x...::-....x.x..x.. 13M2I30M5I131M1I12M 137/186 73.7% 194/94230402 0.0% 8/186 4.3% 116390199 73824356 +4639 chr4 + 190214555 150489035 150489034 150489207 173 ATATATAATATATTATATATAAGAATATATAATATATTATATATAATATTATATAAGAATATACAATATATTATATATCATATATAATATATAAGAATATATAATATATAATATATCAGAATATATAATATATTATATATAAGTATATAATATATTATATATAAGTATATATT chr4 + 94230402 42458632 42458631 42458786 42458632 42458631 42458786 155 ATGTCAAGTATATCAAATATCTGA-TATATAAAATACTGTATACTGCACTATATACAAGCATTCTATATATAAT--------TACAAT---------TATATCAAATATACTACATAATACTAAATACTATATTATATATAAGAATACCATATATAATTACTATATATTTGTT ..:.xx.:.....:.x....xx..-.......x...:.:....:x::.:......x:.::..x.x......x..--------..:...---------.....x.x.....x..:..x.x.x..x...x...............x...:x......x..xxx..x:...x.:.. 24M1D49M8D6M9D76M 111/155 71.6% 155/94230402 0.0% 18/155 11.6% 108030403 82184152 +4902 chr4 + 190214555 150489150 150489149 150489309 160 TCAGAATATAT--AATATATTATATATAAG-TATATAATATATTATATATAAGTATATATTATATATACGAATATATAATATATTATATATACGAATATATAATATATTATATATAAGAATATATAATATATTATATATAAGA-----ATATATAATATATTATATAT chr4 + 94230402 42458625 42458624 42458781 42458625 42458624 42458781 157 TCAGAACATGTCAAGTATATCAAATATCTGATATATAAAATACTGTATAC-------TGCACTATATACAAGCATTCTATATATAAT---TACAATTATATCAAATATACTACATAATACTAAATACTATATTATATATAAGAATACCATATATAAT-TACTATATAT ......:..:.--.:.....:.x....xx.-.......x...:.:....:-------.::xx.......:.::..x:x......x..---...:.x.....x.x....xx..:....x.x..x...x................-----.........-..:....... 11M2I17M1I19M7D30M3D53M5I9M1D10M 115/149 77.2% 157/94230402 0.0% 19/149 12.8% 108030525 82184030 +24219 chr4 + 190214555 150490899 150490898 150491990 1092 TATTTCTGTAA---CACATTACCTCTGTTTGCCATAAAGATCTCCAGGGCTGTATTTTGCAAAAGATAACGACGAGAAAAGATTGATCGTATCTCTGTGAACAGCCATTTTCCATGCAGCCCTTCTGTATATGCCAAGATCTAATGAGGAAAAAAATAATCCCAGGTAAGTAACAATACTTGTTTTTTGTTGTTGTTTCTTTCCCCAATTAAAATAGAAAAGACCCTATTAAGAAAAATAATTTTTAAGAAAAAGGATTTAATAGTTACAGACATAATTTGGAGATGAAGAAAATAAATTGTAATTTATAGAAAAGAAGCTTAAATTAAAAAGCAAAGTAAAATTATAAAACATTTAAGTATATATTCGGGCTTTTAAAAACAATGATATAATCT--ACTGCTTCTGAAGAAATACATATTGCATCATTTACTGATTGATTTTTAAACCACATTATGAAAAGTAAAACTTCAGATAAAATCTTAAAAACAAAAAGCCCTCAAAAGAATGTCATATATGCTTATAAATCACATACACAATT-------CAGTTTCACATGATTATAATTTGCCCAATAATGCTTTTACATACATTATAATACAAATATATTAAGTTCATAACTTTAAAAAATGACACTTTTAAGG--------------------TCACTGTTAAGGCAACAGTCACTCATTCAGAAAGCACAAACACTGACTATATAAGAGGTTAAGTATCATTTTGTCAGCTAAAGCTAAACACAAACCTGCAAATGAACTTAGCATAATCTCCCTATGGGGTAGGTGGTTGTCAGAGTAACTTGTTACAATTCTTGTCATCCCAGGTGACAGACAGAGTTGCTTAAAATGCTTTGCCAATTCAAAGTAATCCTGTCTTTAGTCCTAACCCACTTTGTTGCTTTGATTCAAGTTTTGTTTTTCAAAACGTTCATTTCAAAAGCTTAATTGTGAAAGCGTTAAGGGAAAACCAGACTCAGCATTTCTCTACACCAGTACTATACATAATACATAAGAAAATGAGA------------TGCACTTGCTATCAAAACCTGATATTCTATGACAGCAAATTAAGTTTAAAAAA------TTAAGAAATATATCTCAAAAGTAACCACTATTAAAA chr4 + 94230402 34099227 34099226 34100254 34099227 34099226 34100254 1028 TATTCCTCTAAACTCACAATACCTCTATTTGCCATGAATATCTCCAGTGCTGTATTTTGCAGAAGATAGCGTCGGGAAAAGATAGCTCGAATCTCTGAAAAGAGCCATTTTCCATGGAGTCCTTCTGTATATGCCAGAATCTAGT-----AGAAATTGAGCACGAGAGAGAA--------TATGTTTAAATGTT-------------ATCAGCATAAGTAGCACGTTCTGAAAGAAACAGATACACAAGCAT--GGATTCTAC-----CAAACACA---------TGCAAAACCTACAGCAAAATT-----AAAAGTTGCTCATATCTAAAA------TAATGCTATGAGGCTATCATGGATTTTTTTTTTTTTTTA----------CCTAATCTCAACTGTTTTCACCAAA---CCCTTTTAAAAATTTGCT--CTTATTTTTCCCTTAAAAAATAATTGATTATACTCCATG-GGAGTTTCAGAAACAGTAAG------AAAGGTTGTAAAACACA-----AAAGCATATTCTGAAGTGAACTACTAGTACCACCAGATA------TACCCACACTCAATTTAGCAT-TGTAATAAGAGAAATGTAACAAA-----AAACGTAAAAAATGTC---TTTGAGGACGAAAAAAATTCCTTACATTTATCGTTAAGGCAACATTCATTAATTCTGGAAGTATAAAGGTTGTCTGTATAAGAGGTTAAGTATCATTTTGTCAGCTAAGGTTAAATACAAACCTGCAAATGAACTCAGCATAATCTCTCTATGGAGTAAGCGGTTGTCAAAGTAACTTGTTACAATTCCTGTCATCTCATCTGACAGACACAGATGCTTAGTCTGCCTTCACAGTTCAAACTAATCTCATTTTTAGTCCTCAGCCACTCTGTTTCTTTGTTTCTTCACTTTTTCCTC------TTCATTTC-AATGCTTAATTATGTAAGTGTTAAGGGACAGCAACACTGGACACTGTTGGGCCTCAG----ATTAACAAAGCACAAGCAAAGGAAAATATCTGAAATTTGTCCATTTTAGTAAACACAAACACTTTA----AACAAATTCACCACAGACAAGGAGATCTAAGAAAAATCTCTCA----CCATCACTCTTACAA ....:..x...---....x.......:........:..x........x.............:......:..x..:........x.x...x.......x:..x..............x..:................::.....:.-----.:...x.:.x.x.::.x:..x.--------.:.x...x:x....-------------..:.:x...::x.:x..x:.x.x..::...xx:..x:x:...x.x--.....:x.:-----..:...:.---------..x.:..xx..x.x::x....-----.....xx...:.x..:x....------...x::...:.::.xx.:.x.x..x.x..:xxx:.....----------:x......--....:..:::xx:..---.x:x..xx.xx....:..--:.x......xxx::.x.xx..:.xx::.x.x...:..x:-::.:.:.:.:.....:x...------....:x...x.x.:.::-----...x..:..x.xx..x.-------:...x:...xx...x------.:....xxxx::x...x:...-::.x....x.x....:..x:..:-----..x:x.........x.---...:...--------------------.:.::............x...:.x....x.:...:.:...x::..x..:................................:.:....:...................:...........:......:...:.:........:..................:.......:..xx.........x..x......:xx...:..xx..:......x.....:::.:.........x.x.....:....x.....x...xxxx:..x..::..------........-..x........:..x...:.........x.:.x.x...x::..:.x:.xx:.x:...----..xx.:..x:..:...x...x..:.------------..:x.x.x:..x:...xx.x:.:.:.:..----.:......x.x:x:.:.x..------:.......x..x.....----:x.:....x...x.. 11M3I131M5D22M8D14M13D45M2D9M5D8M9D21M5D21M6D39M10D8M2I15M3D18M2D39M1D20M6D17M5D17M7I15M6D21M1D23M5D16M3D7M20I270M6D8M1D57M4D25M12I29M4D20M6I17M4D15M 679/978 69.4% 1028/94230402 0.0% 164/978 16.8% 116391672 73822883 +16523 chr4 + 190214555 150495578 150495577 150495860 283 TTCTTTAAGT-GTTCATTAGGAAAAGGTGTCAGTACTGAAAAGCAGCTGAGGCCTAGCTAAGCAAGGGGTTCATTTCTTATTGGAATAGTATAGGCCTGGTCTGAGGCTTCACTTCAAAGTCTCTAGAGTTCAATTAAAACTGGATTAGGTAGAAACAGACCCTTCTTTGGGACTTTCTGTTCACTGAAACTCTACATACACTGACAGCACCTTAGACAGAGGTCTAGCCCTCCAATGAATCAGTTGCCATAGAAACCATATCATTACCATTGCTCTGCAGTTA chr4 + 94230402 34101401 34101400 34101681 34101401 34101400 34101681 281 TTCTTCAGGCCGCTCATTAACAGCCGTTATCAGGAGTGAGA-GCAGCTGAGGCCTAGCTGAGCCAGGCCTCCATCCCCAGTCAGAACAGTAACTGCCTGGTCCGCAGCTTCACTTCAAAGTCTCTGGAGTTCAATTAAAACTGGATTAGGTGGAAGCAG-CCCTTCTTTGGGACACTCTGTTCTCTGAACCCCT-CGCACACTGACAGCACCCCAGACAGAGGTCTAGCCCTCCAATGAACCGGTTGCCATGGAAACTGCATCATTACCATTGCTCTGTGCTTA .....:.:.:-.:......:x.:xx.x.:....x.x...:.-.................:...x...xx.:...::.:x:.::...:....xxx........:.x:...................:.........................:...:...-..............x:.......x.....x.:..-.::..............::..........................:.:........:.....:::..................::x... 10M1I30M1D117M1D34M1D89M 226/280 80.7% 281/94230402 0.0% 4/280 1.4% 116394177 73820378 +42900 chr4 + 190214555 150497600 150497599 150498264 665 TTTCATGGGTGACAAATTCAATTAAACATATTCATTACTCTAATGTTCTACTTGGCAGTTTTAGTCAGTATGAAAAATTAAAAATATATAAATAAAATGCTATGTGACCTTTGTATTGATTGGACTAAAATGGCTTTAGCCTGGGTGTGGACGATGGGGCAGTTGG---GAGGGGCAAGAGGGGAGCCTACAAACACACACACTCTTATGTTTTCTCTTCCAATTACTGAGGGAGATGATAAAACCACAGCAAATGATGTATCAGCTCATTTTATCTTATCGCTTTGGGGCTAGGTGACAATGAAGTTCATATTTCACGGGCTCCCATTGAAGACTGTGAAAATTACTTGCCCTTATGACCTGAAATTTCACTAGAAGACAGAAATTTCTCTTCTGCAAAGTAATGCAATTTTTCAGATGTCAACCTTTAGCCCAGCTTTAAAAATTAATTTCATTTATATTAACCAATGATATTGATATTTTCACAGAACACTCTTTGATACATGAAGCACTGACTGGCAAATTGATGTTGCTTTAGATGGGTAAAACTATTTTATTTTAAGCTGCTGTGG-CACACAGATTTATGGCAAACTGAAATTCCCATTTCATAATTTAATATTTGTGCTGGAGTTGATGCACCTTTAAGCC-CTTGGCCTGTAAATAATTCA chr4 + 94230402 34103715 34103714 34104363 34103715 34103714 34104363 649 TTTCATGGGTGACAAACTCAATTAAACATATTCATTACTTTAATGTTCCACTAGATGGTTTTACCCAGCataaaaaaattaaa-taaataaataaa-taCTCTGTGACCTTTGTATCGATCACAGCAAAATGGCTTATGCCTGGGTGTGGGTGGTGAAGGGATTGGAGAGGGGGGTGGTAAAGGA-----------------CTCTTATGTTTTCTCTTCCAATTACTGGAGGAGATGATAAAACCACAGCAAATGATGTATCAGCTCATTTTATCTTATCGCTTTGGGGCTAGGTGACAATGAAGTTCATATTTCACTGGTTCCCATTGAAGATTGTGAAAATTACTTGCCCTTCTGACCTGAAATTTCACTAGAAGACAGAAATTTCTCTTCTGCAAAGTAATGCAATTTTTCAGATGTCAACCTTTAGCCCACCTTTAAAAATTAATTTCATTTATATTAACCAATGATATTGATATTTTCATAGAATGCTCTTTGATACATGAACCACAGACTAGCAAACTGATG-TGCTTTAGAAGGCTAAAATTATTTTACCTGAAGCTGCTGGGGACAGATAGATTTACCACAAGCTGAAATTCTTATTTCACAGTACACTGTTTATACTAGC-CTGATATACTTTAAAGCCGCTGGATCTGTAAATAGCTTA ................:......................:........:...x.:::......x:...:..:.....x.x...-..x.........-.:..x..............:...::x.x:..........xx............::.:..::.x::....---.:....:::x.::...-----------------...........................::.......................................................................................x..:............:....................x...............................................................................x.................................................:....::................x...x....:.....:.....-.........x..x.....:.......::.x.........x..-..x.:.......:x:...:.........::......:.:.x:.x.:...:.:..:.x-:....::..:..x.....-..x.::.........::.:. 83M1D12M1D69M3I16M17D327M1D42M1I57M1D18M1I20M 555/644 86.2% 649/94230402 0.0% 26/644 4.0% 116393885 73820670 +3091 chr4 + 190214555 150512697 150512696 150512755 59 ACAAAGACAGTGCTTTTTGAGAAAAAAAAAAAAAAAAAAAAAAGATGAAGAGTCCTTGT chr4 + 94230402 57604167 57604166 57604225 57604167 57604166 57604225 59 ACAAAGAAAGCACTTCTACAGAGAAAAAAAAAAAAAAAAAAGAGCCCTAAAGCCCCTGT .......x..::...:.xx...:..................:..x:xx.:..:..:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 92908530 NA +3319 chr4 + 190214555 150529576 150529575 150529643 68 CATGGTGGTGCGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGA chr4 + 94230402 76033197 76033196 76033262 76033197 76033196 76033262 66 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGA ..::.......::.--....:.............::........x.xx.x...x::........x:.. 14M2D52M 50/66 75.8% 66/94230402 0.0% 2/66 3.0% 74496379 NA +47328 chr4 + 190214555 150532040 150532039 150532724 685 ATAAAGCCCACTTTTCAAATGGCATGTTCTTACAGATCGTATAGAGGACTGTCATTCTCATCTCCCAATTGGAGCTTGATTGATTACTCCTTTTCCTTATGTTCATTAATCTCGTCACCTTATCTTTTATACCACTTCATTTTAGCAGAAAGGTAATAATAAAACCCTCATCCATTATCCTTGTACTCATCTAGTCAAGCGGAAATGGTTAATAACATGCTACAAATTGAACTTCAATCACTTCATTTTCTCCTTTGTTGAATACACATTAAAATATATTCCAAAAGTGCAATCTGTTTTACAGGAGAATTTGTGTTATATTGCTACAGACAACTAAAATTAAGTGTTTCTCAGTTTGGTTATTAAATATATCCAAGTGCTCTTTTACCAATAATACTAAAACATTAACTCATTTTATTAGGGTATAATAATACAAGAGCCTTATCTCTTAGAACACAAAGACATCTAGACTACCTAATAGTATGTGTTATATGATAGGGTCATTTATCTTTA-------AAAAAAAATACCAGTGATAATTTATGAATTGGTATATTATTACAAATGAAATTGCTATTTTT-----AAAAGTTAATTTGTTTACATGCAACCTTATCTTGAAATGCAAGCCCTATTAGTGAAAAAGTCTATAACTGTCATATAAAACAGAAAGAGAAGAATGGGCATATACATAAA chr4 + 94230402 34110935 34110934 34111626 34110935 34110934 34111626 692 ATAAAATCCACTTTTTAAAATATGTATCCTTACAAATCTTA---AGTACTGTCAT-CTCATCTCCCTGTTGGAGTTTGATTGATTACGCCTTTTCCTTATGTTCATTAATCTCATCACCTTATCTTTTACACCACTTCATTTTAGCAGAAAGGCAATAATAAAACCCTCATCCATTATCCTTTTACTCATCTAGTCAAGCGGAAATGGTTAATAACATGCTACAAATTGAACTTCAATCACCTCATTTTCTCCTTTGTCGAATGCACATTAAAGTATATTCCAAAAGTGCAATTTGTTTTACAGGGGAATTTGTGTTATATTGCTACAGACAACTAAAATTAAGTGTTTCTCAGTTTGGTTATTAAATATATCCAACTGTCCTTTTATCTCTGATACTAAAACATTAACTCATTTTATTAGGGTGTAATAATACAAGAGTCTTATCTCTCAGAACACAGGGACATCTAGTCTGTCTAATAGTAAGTGTTATACAAT-GGGTCATTTATCTTTCTTTTTTTAAAAAATATGCTTGTGAGAGTTTATGAATTGGTACATTATTGCAAATGAAATGGCTCTCCATTTAAGAAAAGTTAATTTGTTTACATGTAGGCTTATCTTCAAATGCAAGCCCCATTAGAGAAGCGGTCTATTACTGTCAGAGCAAGCGACGGGGGAAATAGGTGGATGTAGAAAAA .....::........:...xx:::.:.:......:...x..---..x........-..........x:......:............x.........................:...............:.......................:............................x..........................................................:................:....:.........:...................:...........:......................................................................x..::......:.xx.:...............................:..............:.........:........::.........x..::.........x........::..-...............x-------......x..:.:x....x.:..............:......:..........x...x.::x.-----.....................:.:x........x............:.....x...:x:......x.......x.xx..:.::x::.:...:x.x.x.x..:..x.x... 41M3D11M1D440M1D16M7I62M5I110M 593/680 87.2% 692/94230402 0.0% 17/680 2.5% 116421105 73793450 +9676 chr4 + 190214555 150534731 150534730 150535020 290 AAATTGGAAAGGAATCAATCAATAAGCCTATGTATGCAACAATTTTTGTTTC--ACCCTCTAAACATTCTTAAACTATATCAGATGCCATTGTCTATAAA-AAATGAATTTATCAATTTAATGAGGATTTAGGCAGATTAGTTGCTTAATGAGAACTCCAGCTAATGTGACAGAGGTTTTGTTTCAGTGCTGACAAAATCAGTGTGATAAAACTGTGATTAAACTGATGAGAGTACATTTCTTTTTAAAATCATTATTTCACATA--ATTAATGTTAAACAGCAATATATAATCA chr4 + 94230402 34113583 34113582 34113862 34113583 34113582 34113862 280 AAATGAAGAACAGAATACTAAGCAAGTCAATGTGAGACTCGATTCTTGTCTCTAACC-----ACCATTCCTGTACCACATAACATGTCATCATCCATAAGTAAATGAGTTAATCAATTTAATGAGGATTCAGACAAATCGGCTGCCTAATGAGCACTCAAACTGATGTGGCAAGGGTTATGCTCCAGTGCTGACAAAATCAGTTTGATGAAACTGTGACAAAAGCAGCAAA---GCACTACTCCTTCAGCACATTTTCCTGCATCTTATTAACATGAAAT-------TATAATCA ....x:::..x::.x:.x.x.::...:.x....:x.xxx.:...:....:..--...-----.x.....:.:x..:.:..x.x...:...::..:....:-......:..x..................:..:..:..::.:...:.......x....x.:..:.....:..::....x..:.:...................x....:.........:x...x:::::.:---:..:.x..::..x.:xx....x.::::...x--.....::.x...:-------........ 52M2I3M5D38M1I130M3D31M2I13M7D8M 190/275 69.1% 280/94230402 0.0% 20/275 7.3% 116421148 73793407 +3829 chr4 + 190214555 150537815 150537814 150537897 83 CATGGTGGTGCACGCCCGTAGTCCCAGCTATTTGGGAGGCTGAGGCATGAAAATTGCTTGAACCCAGGAGGGGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........:--.....:.......:...::........x.x..x:..x::...........:..xxxx:..:..:.. 15M2D66M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 74504618 NA +9873 chr4 + 190214555 150543131 150543130 150543362 232 CTCTTTCCCCCAATTAACGATCCT--GCCAAATGTTGGGACTTGAAAAGGCCACAGCTTTATACACAATTAACAGTCAAATTCTAACACAAATTACATGTCATTCTTATCTCTGTATACACATTGAACTCCTATATCTTGTTGCCAAGAGGGAGCTTGC----ACTAGGGAATA-CATCCTGAATTTGTTTAATGTCCAGGAATAACATTTCACACTTAGAAAGGAGATACTATCCACT chr4 + 94230402 34116261 34116260 34116492 34116261 34116260 34116492 232 CTCCTTTTCCCAATTAAGGACTCTCAGTGAAA------GATCTGTAGAGGCTGCAGCTTTATATACAATTAACAGTCCAACTGTAACACAAATTACATGTCATCCTTATCAGAGTTTACACATTGAACTCCTGTATC-TATTGCCAGCAGGCAGCCTTCTCTATCTAGGGAATATCACGATGAATTTGTCCAGTGTCGCAGCACAAAATCTCACACCACAAGATGGTTTACTACCCACT ...:..::.........x..::..--.:x...------..::..x.:....::..........:.............x..:.x....................:......xxx..x................:....-.:......:x...x...:.x.----x..........-..:xx.........::.:....xx:.x.:..x..:......:xx:.:.x.:xx.....:..... 24M2I6M6D99M1D21M4I11M1I64M 171/225 76.0% 232/94230402 0.0% 14/225 6.2% 116426870 73787685 +74974 chr4 + 190214555 150546217 150546216 150547894 1678 ATGTTACTTTTAGCTTCTTTGTGTACAACAAACTGCATTCAATTGGTGAACAAATACAATGTTTAGTATCATATTTAAAACCACTATTCAAACCTTTTCTTAATGCTGTTATCAGTTTTCCTTTTGCAACAATTTTGTGTATAAAAATAAAA--------GCACTGGATTTTTATTAGCGCTGCCCCTTCTTTGTTTTGCTCCACTCTGCAAAGCCCTTTTGGGACACTAAGCCTGCATTTACCATAATACGGATTAAACTTTCTTTGTCCCATTGCACAAGGTTTGTTAGCAGGTTAGTCTTTTTACACTTTTCACAGGCTGCCTGCAGCTTACCCTTTAGGCCTCACTCAAAATACTTCTGTGGATTTACAAAAATACCAGAGTGGTCTTGGGGTTAATTGGAAGATAAGTGCAGTCTTTAACATAGAGACTCATTAAACATTTAGCCTTACCACAATCCACTATCCTTG--AAAGAGAAAAGTTCTAGAGACACTTTAGGAATAATAACACAGTAAAATTGTTTTAAAAAATGACGATTAGTTGTTTCACAGACTTGGAAAAACTTCATTTAACTAC-----CCCAA----------------------------------------AGGTGATATAGTAGAACAAAGCAATGT---CCCTGGTCAGCT------CTCTACATT---------------GGTTTTAATA---TGCATTGATCATAGAGGAAAATTG--AACAGATTTTCTAAGGAACTAAAAGGCAAAATCTTCCAACCTTCTGTTGGGA---------AATTTAAAGTAAAA-------------ACTCAAC---TGATGGGTTATGACAGATAATAT---------------TTATTTGTAAACAAAACATATTTAATTCTAACAGTTTAACTTTGTTGATTTAAATTTTACCCAAGTAAATCACATCAAACATGTCTATTAGAGCCAAATGAAAAATTTATAAAATTCACCCAAAAAACTTAGAAAGTATTTAAAAATTTAAGTTCCTTCTTTAATTTCTAAAATACATACATATACACAAATATACACACTTAAAATGAAATCTGAAACCTACTCATTGGTATTAGGTTATTTTTTA-------GAATTATGCAAGCA--GATTGTTAAA----------------CAGATTAACTTTTCCATCCCCTTACCTCCTTCCAACACTATT-----ACTCCCACACAAAAAGGAAAAAAGAAAAAGAAAAATGCGACAAAACACACAGAC-------ACTTGAAGTAAAGGATTA-GACATATTTGCCCAAGATGCAGATAACAAAAGCAAAAGTGAAGAAAATTGAAGAGACAGCCAAACTTCAGCAACAAAATGGTTAAAGAATCTGAAGTATTGTTCCCGTTATTCTTAAAGTCTGCTATATTGTAGACAGCGCAAACATCAGACAAGTTAAGATTACTGACCATTATCTCCTTAATTTTCTCCGCTTTCCCTCACATTCCCTCTTGCTATCTGGGCACCATTTTTCTAAAGCTTTATTTCTGGTAAGAAGTAAACTTTCCCTAATCCATCTATTATGGAACCTTTAATTGGATTGGGAGCAGGGTGGTGTATAAAATAGCCCCTATTCACTCAAAAGGACTGTAGTTTTAGAGACTTAAAGGAGAAAGGTATTGTGAAACAAAATCCTCAGGGAATCAAGGATTAAAATGTGGCTCTCCTAAATTCATCAACTCCAGGACACA-AATGAATTGCTTCCTTAAACAGGTAACTTTCCAAATACATG-----------------------GCATAGCAAAACTG-----AAATTAAAATTATAATTTTACTTTAAGGAAAATA chr4 + 94230402 34117695 34117694 34119494 34117695 34117694 34119494 1800 ATGTTGCTTTCAGCTTCTTTATGTACAACAAACAGTATTCAATTGGCGAACAATTGCAATGTTTAGTATCATATTTAAAAGCACCATTCAAAC-TTTCCTTAATGCTATTATCAGTTTTTCTTTTGCAACAATTTTGTGTATAAAAAAAAAAAAAAAGAAGCACTGGATTTTTATTGGTGCTGCCC--TCTTTGTTTTGTTCCACTCCGCAAAGCCCTTTTGGGACACTAAGCCAGCATTTACCATAATACGGATTAAACTCTCTTTGTCCTATTGCACAGTGTTTGTTAGCAGGTTAGTCTTTTTACATTCTTCACAGCCTGCCTGCAGCTTACCCTTTAGGCCTCAC--AAAATACTTCTGTGGATTTACAAAAATGCCAGAGTGGTCTTGGGGTTAATTGGAAGAAAAGTGAAGCCTTTAACGCATTGACTCATTAAACATTTAGCCC-ACTACAATCCACTATGGTAGGCAAAGAAAAAGGCTCTGTAGAGACCTTGGCAATAATAAGGTAGCAAAGTAGTTGAAAATAATGACTGCTCGTTGTTCTACAAAATGGAGAAGGCTTAATTTATCCACTTCCCCCCAATCCTCTCCCCCTAAAAAAAAAAAAATGGGGGCAGGAGAGGGGGGAGTCTGATGGCACCAAGCATGGTACTCCCTGTTCAACCACCTAACTCAACATACTGAAAAAGGAGCGAGGTATTAATAGCTTGC--TAACCATAGGCGCATATGGTCAGAGGATGCTCTTAAACACATGGAGAGGATACGGTTCAAAGTTTAATTTTGAGTCACTTGTAGTCTACAATAAAAGTAGCTGCTTTGGAATCAACCTGTAAGGGAAGGTGACAGGCAAGATGACGAAGATGAAGCATTGCTTTCATATAAAGCAAGT---ATGCCAATATTTTTTTTACTCTGCCTTATTTATTAT-----------GCATCAAA---------TAATGCCAA-TGGATATTTAATACTATATTTCCTATG---TTACAAA------AGACATTCTAGTTT-TGCTTTTTTTTAAAAAAAAGATCATTTCACTCAAA----CATTTCTAAAAGGGAACTTAAAAT------ATTTGTTACAGACAATGCATTACAGAAATGCATTATATAAACTTTGATACTTAAATACTTTTGTACCACAACAGATTAACTACATCACCAACTTGCTTCTTTCTTACATTTCTCCTCAACTCTCCCCCAAAGA-----------------AAACACTACAAAAGTCTCCTACTCTGAGGACTTAAAGTAAAGGATTATGTGGCATTTGTGCAAGATGCAGATAACAAAAGCAAGAGTGAAGAAAATTGAAGAGACAGGCAAACTCCAGCAACAAAATGGTTAAAGAATCTGAATCATTGTTCTATGTATTTTTAGAGTCCACTATATTGTGAACAGCGCAAACATCAGACAAGTTAAGATTACTGACCATTATCTCCTTAATTTTCTCCGCTTTCCTTCACATTCCCTCTTGCTATCAACGCACTATTTTTCCAAAGCTGCACTTCTGCTAAGAAGTAAACTTTCCCTAATCCGTCTATTATTGAGCCTTTAATTGGATTGGAAGCAGGGTGGTGTATAAAATAGCCCCTATTCACTCAAAAGGACTGTAGTTTTAGGGACTTAAAGGAGAAAGGTATTGTGAAAGAAAATCCACAGGGAATCGAGGATTAAAAGGTGGCTCTACTGAACTCATCAGCTCCGCGACACATAATGAATTGTTTCCTTAAACAGGTAACTTTCTAAATAAATGGACTCTGCCTCAAGATATAACTAGTCTATCAAAACGGAAAGCAAAGTAAAAATAAAAATTGACTTGAGAGAAACTA .....:....:.........:............x.:..........:......x.:........................x...:........-...:.........:...........:...........................x....--------................:.:.......--...........:.......:..........................x..........................:.........:........:x...........................:.:.......x.............................--...........................:.............................x.....x..:.......::.xx....................:-..:............xx.x.--.....:...:.:...:x...x..:..:.x........x::..:...:.x...xx...x......x::.x......::...:.x.x.::..::...x.....x.:..-----.....----------------------------------------:..x::.x.::.:.x..x.....xx..---.....x...:.:------...x....x---------------...x......---...--.:.:.....:x.x.x..x.--.:x:...x:...x.::x..xx::..:x:.x.:xx.:...xx..:x:..xx..---------.:.:..x.:.....-------------.x.....---.:.x..:xx:......::..x..---------------..::..x:.x.:...:..x:.---..x.:..:.x...xx:.x:x:..x:...xx.x...:-----------:.......---------..:x.....-..:.x.x..x...xx..x:x:..x.x:---...x...------.:.x...:x....:-.x....xx...xx....x.x..xxx.x:..x....----..:x::.....x.:..::.:...:------...x..xx:..::x..x:x...-------.x.....::..:.x--...xx.....----------------..........x:x:..:.xx...:.:..:...:x...:.x:.-----....:.x.x....:.-----------------...::.x......xx.x.xx..-------....:.............-.xx::.....:x.......................:.......................x......:............................x:.......:xxx....:...:....::.........::................................................................:....................x:x....:.......:......x:.:.....x........................:........x..:................:......................................................:...........................x.......x.........:..........x........x..:..:......:....:x......-.........:.....................:.....x...-----------------------.:x..x......x.-----...x.....x..x..x..x....x.::....x.. 93M1D58M8I26M2D161M2D100M1D20M2I106M5I5M40I27M3I12M6I9M15I10M3I3M2D19M2I52M9I14M13I7M3I23M15I21M3D36M11D8M9D9M1D27M3D7M6D14M1D35M4D24M6D22M7I14M2I10M16I42M5I15M17D22M7I18M1I451M1I41M23I14M5I34M 1291/1609 80.2% 1800/94230402 0.0% 260/1609 16.2% 116428522 73786033 +3519 chr4 + 190214555 150560846 150560845 150560915 70 CATGGTGGCACATGTCTGTAATCCCAGCCACTCGGCAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..:..--...:.:.....:...:.:x........x.xx.x...x................ 15M2D53M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 74527649 NA +114881 chr4 + 190214555 150569394 150569393 150573431 4038 ATTGCTTTACATTGTCCAAACAAAAGCTGTGTTAATAATAAAGAGTATACTTC------------TGAATCTGGAGTCCCATCAATGATTTGTTCAGCTTGCGTAAGTCACAACTGATTGGACACAGTCCCTGTGGGCTTGCCATTTCATCCAGACTGGACGGTTCATTAGTCATAACTACTATAACTGTACAGCAGAGACTGCAGTTTTATCTCATCGTACATCTTTGATCAAGCTGCCTCAATT-CTGCTTCATCAGCATATGAAGTTACATTATTGGAGCTTTTTATTTTCCAGTCGGTAATTAACAGAGATTATGCTTTTTATCAAAACATGTATTTGGTCTTCACATTTAATAGTGAG---GGCCCAGATCTGACCACCATTTGACCTCTG-----AAATTTCTACCACC-TAAATAC---CATGAATCATAAACT--GAAATCCAGAATACCACAGAGAAAATTAAACAAAGAAAAGAACTGACCTGTGTTAAAAAGCATAAGATGATTGCACTTATCTAAATTGAGACTAACCATATTTGCTGCAGCTTCTCATTAAACATTAAATCGCACACCAGAAGAAAACATCATACATATTTATTGTTTTGCACTGTCACTTTCAAAAGACTCATACCACAATTAGTGTTTCTCTCAAACTATAAGCTACATAAAGAAATTTCCCATGAAGCCTGAAGACAAAGTAATGTAAAAGATGGTTCAAGAAGGTTAAAGAACAGATGGATAATAGATTTCACTGAACACTAAAGCATAATACACTTACTTCAGAAAAGAAAATGTTGCCAAAACTTAGTTCAAATATAAAATACTGAATGAAATTGATGTGTCGGGAATTTTTTTTTCCTTCCAAGTTCTTTTGGAGAACAATAGGGGGCTAAAAGGCCTGTCTCACTATTTTTGCATCTCACTATTTTCGTGTGTAAAGTGTCCCCACTGTAGGCTGCATGAACAATCATAATCGACAGTTACATGCAGGCACTGAGGCTGCAAAAATCCCAGAGTAATTAGTGTTGTCTGAATGCAATGACATCTGTGTTCTCATGGTTCTCGAGACATGTCAGGCCAATAAGATGTATATGAAAAAATATGACAAGCATTGCAAATGCCCTTCTGAAAGGTCTTACACTTTAGGGGAAAGCTGAAGAAATAACACATGTCATCTTCTCTTTGTAAGCAATATATTTAAGA-------TTACAAGATCTAGAAAGATCTTTTGAGTCATT---CATTCTCTTTTTGTAACTATAAAGCATTTGTTCAGAATACATCACTAGG-GTATGAAAAAAAT---CTGTTGTAAGTTGGCTTCTTT--TTAAAACTTTCTCAGCACATGTGATTCTGTGCAGTGCAATGTAGGTGCCCATTCCTGTAAGTGACAAAACAGAGAGCATATCT-----TATTAAC-ATTCCTTGGTTTCGTTACCTTTTAATTAAAA-AATATTACCTCTTAGTACTGAACATAAAATAGTTCAAAATTTGTGGTTAAATGCCTTAGAATTATGTTTGTATTTTTCTA-ATAATAC----------AGAGTGTCAAATTGACTGTATTAAA---------------------------------------------AAGTCTTTGTTTTAAGACAACTAATGCTTTTGCTTACTGATGCCTATTACTGAGGCCTCTCCCTCTATATGCTGTAGCAGTATGTTTGAGCATGCACTTGCTCCAAGAAAGACATTAGTCATCATTAACAGAAGCACTGACACCAAATCTAAGTGCCTCTCCACAATGACCAAGTGGCAATCATCTTTCTCTTACACTGTCACTGCTGATTAGGATTTTCTTTCATGAAAATTTAATTTGTACCCCTTTCTGCAGCTTCTTTTTTTTTTCATTCCTGAAAAAGCAACGTGTTCAGGAGAGATTACAGATAAAG-CAAAGAAGCTCTACCTATAATATAGCTAATGATATAGAGATTGCAAGATTCTCAGGTAAATCTTTTCTCTAATCCAACAGAAAAA----CACAGATTAAATCAATGATTAATAAACAGAAGAAAAACAATGATTTTAAAAGGAATATT----GCTTTATTGCTTTAAGAATCCATAAGCCTCAAAAGGTAACTAATTCAAGGA------ATCCAAATAAAACTTCCCTAAATATTAACATAATCCCAAGCTTCTTTAAA--ACTAAGATAACA-----------------CTTTGATAGTTGCCATCTTTCACTAGGTTTCAAATTTGTA--TTCTCCATTTTGTAA-----ACAAAAAGACAGGGGCATTCACACAGAAATATCACTATAAACTGAAGAAAATACTTAAGCATTCATACCTTTAGTATGCATTAACCTACTGGTTAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATT---TTCAGTTGCACTGGACAAATGAAAGTGATTCATTTGGCCAAGCAGGGTACTCTACAGCTAGATGATACTACAGA----CAAACTCTGGTTCTGTACAATATCACAA----TGTTAAACAAGATATCATAGCAATAAGTTATTT-AAGGAAGTTTTTAAAAACATTTACTTTTCTGTTTTATTTCAATCTGTTTAAAG--TTTTTTTTTTTAAT-GTAAGCATGTGATAGTTTGCAAGGGTCCTGGTACGAC-----------CCAAACTCCCACTTCTAGTTATAAATATTATCATCTCTTCGTATTACTTAGGTATTATAACAAAATAGAGATT-----GGTTTAAATTTAAATTATCTTGAAATTATTTTATATCCCTTTTAGAACATATGTACTTTTAGTCAAAACATG--------------------------TAACACTTTTGTGTTTACATGAGCATAAATTGTATCTTTTTAAAATGTAAATAACCACATGAAAT---------GCTCTG---AAAGCAAAAATCAACATTATTTCTTTGTAAATCAGAAGCAAGTACAATTCATCAAA-CTTTAGTCA---TTAAACGATCCTTCTACTCCTATTTTATTCTGAAAA--------ATAATACAGAAAGTCAAACAG------CAACTGCTTAGTGCCATTTACAAATGGTTTGTTTTTTCTTTTTTTCTATTTAAAATTGGTCTGCAATTAGAACATGTAAGAGGAG---ATTAGGAATTAAAA-TGGATTCTGAGAGGCAATTTCTAACTACTGAACTTTTATAACAGGAGTATCTTTGATTAAATAAGGAGCTAGTCTAAACTAAAAGCAAAACTGTACCATAATAACCCAACTTAATTATCTTTGCAGAATACATTTATAAATGATTGGCTCATTTCTACCTTTACTTGACTAAGTAAATATGCCTCTTAAATTCTCAAACATTGAAAATTCTGATTCTC-------------------ACAGTTGCACAGACTTAT-CTAAATCAAAACT-------------------TCAAAAAGTTACAATATAATTACTGACTCCATTGCTAGATCCAGTACAAGTTCAAGTAAGGAAGTTTAGCTCTGTAACTTCCACTCCTCAACCTAAACCTCCAAGTCACTTGTCAGTTAAAGGTTGGGCGATTTATTGACCGCCTCTGGATGCATACTGTCAGTGCTGAAGGAAATATGAGGGAGGGTTGTTGCTACTGTTCTGGAGCTCATTGATAATGACATACCTGCCTCTGTCACCCATTACCCATACTACAAACTACTTAGACCTAACTGAAAAATCAATAGCCTACTTGCACTGGTTCCTGTGGCTGCCTCCTTTGATTGTCAGCTCCTGTCTAGGGTCAGCACTTACATGAAAGGGGCTGTGACTGCCTGATGCTTTCAGGACAACCTAACGATATGAAACTAGCCAACAGAACAGTAAATTCTGCCTCCCTGCCCTCCTCATCAATTAGGCTTTGACTAGGCTTGCCTGTAGAAACCTGACCTTTTAAGTTTAGGTGAATATGG-ACTAGCTGAACACACCATTGCCCTCAGCACTGAGCCAGGAAATCTACTGACAGGTTAAACAAAACAGAAGGTTGTAACTGTCATAATTTGCATTGCACTTTCACGCCAACAAGGGTGTTATCAGTAGGGGCAAGCCCTGGAACACACAACTCCAGCACCCTTAAGCCACGCTACTCATAAATTTTCAAGTGAAGTGAGATAAAACATAAATTCACAAATAGCAATGCATTTCTCATCTCTCAGTCTTTTAGGTTTGCACTTTGCAAACCCACAGAGTGCCCA---TCAACAACTCCTTTTGGTCAC-CTGGCACTC chr4 + 94230402 34127938 34127937 34131807 34127938 34127937 34131807 3870 ATTGCCTGAAAATAACTTGACAAATCTGACATTGCAAACAAAGAGCACACTTCCTGTTACAATATTGAATCTGGAACACCATCAGTGTTTTGTTCAGCTTGCATAAGTCACAACTGATTGGACACAGTCCCTGTGGGCATGCCATTTCATCCAGACTGGACGGTTCATTAGTCATAATTACTATAACTGTACAGCAGAGACTGCAGTTTTATCTCATCATACATCTTTGATAAAGCTGCTTCCATTTCTGCTTCATCAGCAAGTGAAGTTACATTATTGGAGCTTTT-ATTTTCTAATCTGTGATTAACGTTGGCTGCACTGCTTAT-GAAACGCGTACCAAAATTCAAAATAATGTACGAAGTCAGGCCACGATGTGACCACCACTTGAACTCTGTGTTAAAAATCATGCAGCTGTTATTGCTTGCAGGAAGAATAGATTCAGAAAT---GACAGTTGCAAGGAAAATTTAACAAAGAA--------------------------------------------------GATACCAAC-------ACAACAGTTTAT-----------------------AAGAGAAAAC------------TGTTGGTTTCCAATGT-----------GAACCGTGACCTAATT-----------------------TAGAAGAAGG-------CACGA--TCTAATAACAAC----TGTAAATGCAGCTCTTAACAAACTGAATTTTACATGTATAAAAGC----------------AGCACGTGACACCATTTTCT----------TGCTGC---------------------GGTGCT--------------TGTTGGTGATTTTTATATCTTA----------TTGTGTGATAGCAGGGAAC-ACAAAGCCTG---------------GTGGCACTATCTGAGTGTGCAGCGTGTACCCATGATAGGCCACATAAGCAGTCATAATCGACAGTTACATGTAGGCACTGAGGCTGCAAAAATCCCAGAGTAATTAGTGTTGTCTGACTGCAATGACATCTGTTTTCTCATGGTCCTCTAGACTTGTCAGGCCAATAAGATGTATATGAAAAAATATGACAAGCATTGCAAATGCCCTTCTGAAAGGTCTCAC---TTTGGGAAAAGCTGAAGAAATGACACATGCCACCTCTTTTTTGC---CAATATACCTAACAGCCAAAGCTTCGAGATTTGAAAAGGTCTTTTGAGTCATTTTGCATT---------TGGCTATGAAAGGTTTATTCAGAACACAGCACTGTGCTTACGAAAAAAAAATACTGCGGTGGGTTTTGTTCTTTAACGAAAGCAAGCTTCGTTAATGGAA----GAGGAATAAAACGTGAGTCCTGACTT-----------------GAGTGCTTACATGCTGGTGTCAGCTATGCCttttttttttttttttttaattaaaGCAGCATTATGT----------AGCACACAATAG------ACTCGTGTGTATATATATCATACACGTGTGTATATGCATATATAGAATACTTTTGCTCAAAGAGCGGAACAAGAACAGCTTTACAGCTGCGCTTTCTGGCATTGCAGAAACACTGCAGCCTTTCCAGCTGAAGCTTTTGTTTTAGGATTCACAACCTTTTACCTTAATAGTGCCTATCTCTCAG----CTCCTTCTCTGGACTGTAGCAGTATGTTCGAGCATGCGTTTTCTCCGAGAAATACATTAGTCATCATTAACAGAAGCACTGACACCAAGCCTAAGTGCCTCTCCACAATGACCAAGTGGCAATCATCTTTCTCTTACACTGTCATTGCTGATTAGGGTTTTCTTTCATGAAAATTTAATTTGT-TGGCTTTCTGCAGCTCCTTTTTA----CATTTCTGCAATAACACAACATGCCAGCAACACCGAAAATGCAGTCAAAGACACTGTAACTGCT-TATAGGGGAAGATA---AGATTCCAA-CCGCTCAGCCGTA-CTCTTGCCTAGTTTAACATAAAGAACGGCCCTGCGAGACACTGTGGCTGCTGA-CAGAGGGAAAACTCCCATT-------GAATACCTAAGGCTTCAAATCTCTTGGAACACCTTCTGTCCAAA-------TAATTGAAAAATTTTTCATCTGGAAGACAGTTAGCCAGCC-----CATCTTCTGAAGCTTTGTTCAATAGGCAAAGTAACAAGATCTAAACAGATTTTCGTAACTAATTGCT-TTTGTAACT--GCTTCAAATATACAGGTACTCAGGTTTTTAGCTTATACAAA----------TATTTATTAAAGGATTTCATAATCCTCTGATAAA----TTTCAGC-CTCACTTCTTGGGTCTGCGTCAAC----------ACTGCTCTTGCAGTTAAAAGGCAGCCACAAAGAAAATGGCTTTAGCTGCTGCAGGCAGCTAAAAA-GTTTCA----GGCATGTATTATGCTTTGCAGCTATTCAATA-TACACAGTCTCAGATTCCTGCTCTGTGTAACATTACAAACATTGTTAAACAAGATACCATAGCAATGAGTTATTTTAAGGAAGTTTTTCAAAACATTTACTCTTCTGCTTTATTTCAATTTGTTTAAAGattttttttttttaattataaGCATATGCTATTTTGTTAACATCTGTGCACAGCATAAAACCTGACTGAATTCCAACTTCTGA--AAAAATGCAGATAACTT---ACATCCCTCGAGTAAAGTAACACTAGGAAACTTCAGGAGATTCAGATTAAGATA--CCTGAATTCATTTAAC-TGGGTTTCCATACAGGTACATTTAAAACCAAAACAAAGCAAACACACAAACAAAACGATTTATTACCATTTTTAAGCTCCCTCG----------GTATCTTTC-AGAATTTAATTAA--GCCTCAAATTTGGATCTAGCTCTATTAAATTCAGAAACCACCACTACT-----------------AAGGTCCAAGTAATAAAAACTTTGTTCAGCTTCCTACGGTATTAATACCCCACTGCTGA-CTGAAAACAGCGTCGGTAGT-CAGGATGTAAAACGGTACTGACAGCACTTTGG----ATTTATAAGAAAGCTTCAGTATCTTT------------AAATAGTCTCCACATATGAAATTTAAGAAGAGGAAACTAGGAATTAAAAGCGGATTTGGAATGGCAGACGGCGATTGTTGCACTGCCGCGGCACTA-TAACCTTGATTAAATGCAGAGCAATGCTAAAGTAAAAACAAAGCCCTGCCATGGAAACCTAAATTAACTACTGAAGCAGACCCCTGATGCAGAAAGCCGGCG-----------------ATCTGAGC---TATTCCACTTGA--TCTCAAG----AAAAACTTTCACTCTCCGGGAAGCGTGGAGGCAAGGCGGCCGGCCAGGCCTCTGCTGGGGCCTTGCTCCTGCGCCCTCCTTGTCCCTCGCACAGATGCGG-GCGGTGGCCTCCTCCTTCGC--AACCCCGT-CAAGTTCAAGTACAGAAGTTTAGCTCTTTGACTCCCCCCTCC--------ACCTCCAAGTCACTTGTCAGGAAAAGGTTGGGCGATTTATCGACCACCGCTGGATGCATACTGTCAGTGCTGAAGGAAATATGAGCGGGGGCTGTCGCTACTGTTCTGGAGCTCATTGATAATGACATACCTGCCTCTGTCACCCATTACCCATACTACAAACTACTTAGACCTAACTGAAAAATCAATAGCCTACTTGCACCGGTTCCTGTGGCTGCCTCCTTTGATTGTCAGCTCCTGTCTAGGGTCAGCACTTACATGAAAGGGGCTGTGACTGCCTGATGCTTTCAGGACAACCTAACGATATGAAACTAGCCAACAGAACAGTAAATTCTGTC-CCCTGCCCTCCTCATCAATTAGGCTTTGACTAGGCTTGCCTGTAGAAACCTGACCTTTTAAGTTTAGGTGAATATGGAACTAGCTGAACACACCATTGCCCTCAGCGCTGAGCCAGGAAATCCACTGACAGGTTAAACAAAACAGAAGGTTGTAACTGTCATAATTTGCATTGCACTTTCACGCCAACAAGGGTGTTATCAGTGGGGGCAAGCCCTGGAACACACAGCGCCAGCACCC-GAAGTCACTCTCCTCATAAATTTTCAAGCGAAGGGAGATAAAACATAAATTCGCAAATGACCCTGCATTTC-AGTCCTACTTTCTTTCAAGTTCACACTCTGGCAACCCACACCAGACACATACTCAGCTGCCCTCTGTAGATGCGCTGGCACTC .....:.x.x.x.:x.:x:.....xx:x:::..:xx..:......:.:.....------------..........::x......:..x..............:...................................x......................................:........................................:............x.......:..x...-..............x:........................-......:.:..x..:......:xx.::.:::..x:....-:....::...::x::x:.:x.x..xxx:..xx:..---....xx...x.........:....x.....-----...x.:x.:.x:.:-.x.x.:.---..x...xx...:.:.--.....---..xx::::..::.......x.........--------------------------------------------------..x..:...-------:.x:...:..x.-----------------------.::.......------------.:...x...x..x...-----------..x:.:.:x.x:....-----------------------..x.x:...:-------..:..--:..:.x:....x----......x.xx.x.::x.:x.:::.:..xxx:.x...x....x..x----------------....::xx....:xx:...x----------..:...---------------------::.:..--------------...:..x:......x.x..:.x----------...x:x:.:.::....::.-.x..:.....---------------:.xx......:.xx.....:.:x....x....:x:.....::...:.:..:....................:.............................................x...............x..........:...x....x..................................................................:..---..x...:..............:.......:..:..::.:....:---.......::...x.-------:.x.:....:.::....:..............---....---------.::....:..:x:...:.......:...x....:x.-x..:........x---...:x..::...xxx......--:x...:.xxx..:x.:xx...x:.----.x.x.:.:x..:..::..x.:x.:.:-----------------...x..x..:x.-----.:.:.:.-..x....xx...:x..x::...........:-.::....:x.----------.:..:.x.....------.:.:...xx..x..::x.:.x.xx::...x.:...x:x.x..-.x.....----------....:.xx.x.xx:..x.:x...x.---------------------------------------------...::.........:..:xxx:..:x:...xx....x.::.......:x..x..----....:...x.:x:...............:........::..x....:.....x...................................::......................................................:...........:..........................-:xx............:......x----....:...x..x.:..xx:::.x.x:.x:.x.:::x.:..:x..-......x:..x..x..::x-.....xx:.x....---.....x...-x:x.....x::x.-..:..x:...:.::....x...:.----.x.x.xxx:.xx.x:..::.:x.:.-....:.:.....xx:x...-------.....::----....:.xxx..:.x:...:x.x.xxxx::....-------.....x..::.------...:::.x:.x.x..xx.:.:x:-----...xx..:x......:x..x..--:x:..::.....-----------------.x.x:x..:....:-.:.x.x...--.:.......x.::.--.x...x:x...x..:-----.....----------:...:.:xx.:::..x...:x..xxx....x:..----:..x...-:...:x:...x:..x...:.:...----------::..:.:..x:xx..xxxxxx:xx::x:x:.....x.---..:..:...xx::.:..:x.:...:-.x....----.x..x.:.xx:.:..:.:......xx::...-....x.----..:.:..:x.:.....::..:..:....----..............:.........:........-............x............:.....:...........:.........--..............-:.......:..x..x....:x.:x:..:xx.:..::.-----------.::..:...x......::--.x....::x:x:.x..:---::..:x..:::...xx:.....xx.x::.:x..-----.:..:.:...x.:..x--.:....x.:....x.:-.xxx...:x:x...x:.::.:..xx.::.......x:--------------------------..x..:....:x.:.:x.x:.----------........:-.:...x...x...--:.x.x....---------.....:---..xx..:...:..x..:..:.-----------------x.:..x...x.x..x...-....:x...---.:xx...:.x:.xx...:..xx.x:.:x-.......--------:..:.-...:.x..x....:.------..:.xx:..:.----.....:..:x::x:.x:xx.x.....------------..x.:....x..xx..x:.x..x.....:...---.:............-:.....:x..:x....:x:xx::.:.::..x...x::::::..xx.-..x.:..........:x:....x.xx.....x.....:....:.:x.:....::x....:..x....:..::xxx.....x:x.xxx.::.:.x::::...x-----------------:x..:..:---...x..x...:.--......:----:....:.:.x.:....-------------------:.:.::.xx...:.:.x.-..:::x.xxx:..-------------------..:x.x..x.:.::-::::.x:.:xx....x.:..--:.:..x..-............x:.............x.:...:..x.::.:--------....................xx..................:....:..x....................................x.:...:...:..........................................................................................................:.....................................................................................................................................:.-.............................................................................-............................:...............:................................................................................:......................:.x.........-x...:...x..x................:....x..................:.....::.xx........-x:..::x.xx.....:.:...::....:..xx........xx:x:.x..---...:.x:.:.::.x.:.x::.-......... 53M12I181M1I40M1D39M1D35M3I30M5I14M1I7M3I15M2I5M3D29M50D9M7D12M23D10M12D16M11D16M23D10M7D5M2D12M4D45M16D20M10D6M21D6M14D22M10D19M1D10M15D223M3D44M3D14M7I32M3I4M9D36M1I13M3I21M2I24M4D26M17D12M5I7M1I31M1I10M10D12M6D42M1I7M10I25M45I54M4D183M1D23M4D44M1I19M1D14M3D9M1D13M1D24M4I25M1D19M7D7M4I33M7D11M6I23M5D22M2I12M17I14M1D9M2D14M2I15M5I5M10D34M4D7M1D24M10D37M3I25M1D6M4D31M1D6M4I28M4I33M1I53M2I14M1I37M11I18M2D17M3D33M5I16M2D16M1D37M26I21M10D9M1D13M2D9M9I6M3I21M17D18M1I9M3I28M1D7M8I5M1D15M6I11M4D26M12D32M3I14M1I46M1D102M17D8M3D12M2D7M4D16M19I18M1I13M19I14M1D20M2D8M1D42M8D338M1D77M1I160M1D71M1D49M3I21M1I9M 2655/3588 74.0% 3870/94230402 0.0% 732/3588 20.4% 116441456 73773099 +3029 chr4 + 190214555 150571646 150571645 150571697 52 GTTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATTTTCAGTTGCACTGGA chr4 + 94230402 39622434 39622433 39622485 39622434 39622433 39622485 52 GTTGTTTTTTTTCTTTTTTTTTTTTCCCAGAGAAGATAACAGCAGCACTGGA ............:............:::x.....:x.xx...:x........ 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 110949212 79265343 +26722 chr4 + 190214555 150574709 150574708 150575345 637 TTTGATTAGCAGAAAAG--ATTAGATTATTCGTAGAGCATTTAACCAAAAAGTTACCCAACAAATATTAG----AAATAGAAGGCCCAATTAAGTATGGTTGGAATCCTTTACTGACCAAATATGATGATTAACTAAGCATCTGGTCATCTTTCTGCTCCTTTGTGTGTACATAGCTGATAGCAAAGTGAAAGGGTATGGATAGTGTCTGATCCCAGCAAGCAAATCATTTGAAAACAGTCATAGCTACAGGTCAAAGATTTTCTACTCAGTCT-AGATGGATCTAAACGTACTAACCTCGATTTTAAACCTAATTACCTATATACCAAATCAGTCAGAAAATAAGAGAATGACTCTTTATGATCCAAAGATAATAAGGGAAGATAGGAAGGAAAAATTCAGGAAAG----AGACTGGCAGAACCTTGATATCCATAGGCCAAGACAGCTGTTTTATATCCTAGCTTTATATCAGATGGTT-----AAAGGAAAAGTTTCCATTCCTTAGATCATTAAATATTATTTCATTTATATTACACAGATGTCTTCCATACATAGATTACAACCAATGAAGCATTTTGTTGTTGTTGTTTAACCACTACAAGCAATCAGAGAAACCTCTCTGCACATCACTTTTACTCTAATTCATAA chr4 + 94230402 34133095 34133094 34133723 34133095 34133094 34133723 629 TTAAATAAACAGAACAGCAGTTAGA--ATTAATATTGCATTC--CAAACAAACTACAGAGCAAACACTAGTTAAAAATGGTAGACCTAATTGAGTCTGGATGGACCCCTTTACAGACCTAATGCAATGATTAACTATGCATCTGGTAGCATGTCAAGTCCTTTTTGTGTGCCTATCTGATAGTGAAGTGAAAGGGCATGGACAGTGTCCAGTCCCAGCAAGCAAATCATTTGGAAGCAGTCATAGACATAGATCAAAGATTTTTCACTCTATCCGAAGTCTATTTAAACCCAGCAACCCAGCC------CCTTGTTGC----AGACAAAACCAGTTAGAAAATAAGAAA--GACTCCTTGGGATCCAAAGATAATAAAGGAAGATAGAAGGAGAAAATGAAGAAAAGAAACAGACTGGCAGAACCTTGATTTCCATAGGCCAAGACAGCTGTTTTACATCCCAGTTTTATTTCAGATGGTTAAGGAAAAGGAACAATTTCCATCCCTTAGATCACCAAATATTATTTCAATTAAACTATGCAGATGGCTTCTATACATTACTTG-AACCGACACAGTTTCCCCTT-------CCCAGCTACAGGAGACAGTATGTAGGACTATTTTGCACACAGGTTTTTATCTAATCCGTAA ..x:..x.:.....x..--:.....--...x:..xx.....:--.x..x..::...xx.:....:.:...----....:.x..:..:....:...x...x....x:.......x....x...:::...........x.........x::x.x..x:x......x.....:.x..x.......::...........:.....:......:::.....................:..:.........x:.:..:...........::....x:..:-.::.xx..:.....x:.x:....:x.x:------...x:..:.----.x..x...:....:...........:.--.....:..:x................:.........:.:.::.....xx..:....----...................x.........................:....:..:.....x..........-----.......x.:.......:..........::.............x...x.:..::......x....:......x:x..:-....:.::x..:x.:::x..-------:::.:.:..x:x.::..:.xx.x:::..:x:.:......:x:x....xx......:.:... 17M2I6M2D15M2D26M4I200M1I28M6D9M4D27M2D56M4I70M5I78M1D20M7D61M 456/613 74.4% 629/94230402 0.0% 40/613 6.5% 116441614 73772941 +14479 chr4 + 190214555 150577784 150577783 150578196 413 GTTAACTCAGTAAATACATTTTTAAGTAAAGATCAGCAAAAAATAAAAC--------------AGTTTAAGA-----ATTTTGTATTCTCTGGAAACATAAACAGGATTATAACTGTCAGATT-ACAGAAGCACTGACTTCAGCCATTAGTTTGGTTTGGCTCCTGAGAAACACAACATGAACTACTGCATCATTTCTTTTCAAATCCATACATTCCCTGCAGCCGTTCAAGCTTCATCAGCAGTGCAGGAATGTATAAAAATGACAGGCAAAGGGCATTAGGTTTTTTTACTTCCATACTGTTTTCCTATAAATGGAAGACAGGATTCTTTCTCAAAGCACTT-AAGCTCAAGCTCAGTCAATGCTGA-----AGGAAAAATACAACTGAATTCTCTATGCAAGAAAGTATCACAATTGGATTATTTACTACTTTTCA chr4 + 94230402 34135176 34135175 34135595 34135176 34135175 34135595 420 GCTAACTTCATAAACACAGTTCTTGGGAGAGATCAGCAGACAGCAAAGCCAAGCCATGCCTTCAAATAAAAAGGTACATACTGCACACTACTGAA-TGTAGACAGAATTTTAACCGTCAAACCCACGGCAGCCTTTACTGTAACCGTTAACCTGTTTTTGCTGCAGAGAAACACAATGTGCATTACTGAATCATTTCTTCTCCAATCCATACATTCCCTGCAGCAGTTCAAGCTCCATCAGCAGTGCAGGAATGTATGAAAATGACAGGCAAAGGGCACTAGCTCTTT----TCCCATACTGTTCTTCTATAAATGGAAG-CAGAGTTC---AACAAAGTGCTTAAAGCTGAGAATGTTTGAAGACTGATCCCCAGGAAAAAAATA-------CCACCATGTTAGGA---TCCACGAGCAGATTAATTATCGTGTTTTA .:.....:x:....:...x..:.x:.x.:.........:.x.::...:.--------------.:x.x..:.-----..x:..:.:x..x:x...-::..:....:...x....:....:.::-..:.x...x:.x...x:.:..:...:::..x...x...x.x...........::..x.:.....x..........:..x.....................x.........:......................:....................:...x.:...----.:..........:.:.............-...::...---xx.....::...-.....x.::x.xxx.x..x:....-----........x.:.-------:.x.:...:x..:.---x:...:.x::.....x...::::x...:. 49M14I9M5I18M1D27M1I164M4D28M1D8M3D12M1I24M5I12M7D14M3D29M 288/394 73.1% 420/94230402 0.0% 45/394 11.4% 116442608 73771947 +33578 chr4 + 190214555 150578864 150578863 150579630 767 GCTAGCCCAGCACCACAGCTCTGGGCTGAAGCATGCCAATGTTGGCACTGCCTAAGCCAAACAAACAAGATGTTTAACAGTCAAATAAAATGTCCTGCAGCCTCCCTAATGAATTTGTCAAGGACCATCAGATTTCGCACCCCCTCCTTTGCCTCATTAACTCAAGTATGATGAGACGGATTATAACAAGAGAATACAGATGAATCGGTCTGAAGACTTGAAGTGGCTTTTAGCCTCTAGAGTTTCTTTCT---CTCACTTGGTCTCCTTTAATAGAATATAGTATCTC---CTGCAGAAGGAGCTGCCAGTTCGTTTTAATACACCATCAAGGAGCTGCTGATGGACTTCTATACTAACATACATAAAAGCAGAGGTGACAGGGGCTCTTCAATTACAGCCTCCTCGGATACCGTTTCCCCCTTCAATTATTCAACCAGAGGAAGAGAGGACCGCAAA----GGCGCAGCTGAAGCTGCTCTTAGAGCAGAGGCAGCCAGAGTGAGTTGGGGTGGGGGAGGGGGGAGAAAGAGAACCAGCAAGAGGGAGCATTATTTGCTGGAAGTGTTTAAGTTTATTGCTCGAATGATGTTTCTAATTAGTACCACGGCCATAAATTAAAGTC-GCCTTTGTTTAACTGATTTATTATTTACTAGAGCATCTACCTAAGACAGGGTAAATTGGTAATGAATTGTTTTTAAATCAAAACATTTGTAACGTTTTATCATCCTTCCCTCTGTATGTAAAAGTGGAGAAGCGTAGGGGCAAGGATGCGA chr4 + 94230402 34136358 34136357 34137069 34136358 34136357 34137069 712 GCTAACAAAACGCTATTGCTGCAGGCAGCGGCGTGCCGACGTTGGCGCTGCCTAAACCAAACAAACACGATGTTTAACAGTCAAATAAAACGTCCCGCAGCCTCCCTAATGAATTTGTCAAGGACCATCGGAT----CACCTCCGCCCCTGCCTCATTAACTCAAGTATGATGAGACGGATTATAACGGGAGAATGCAGATCAATCGCTCTGAAGGCTTCAAGTGCCTTTTAGCCCCGAGAGTCCCTCTCCGCGCTC-CTTCGTCCCT----ACGGAGAACGGTGTCCCCCGCCGCCGGAGGGGCTGCCGCTCCG-TACGGTGTACTGTCGAGGAGC-GCTGACGGACTCCCGCGCCAGCATCCATAAAGGCAATGGGGAGAGGGGCTCTTCGACTGCAG-CTCCTCCGATACCGTT---CCTTTCAATTATTCATCCCGGCGAGG--------GCAAATTCCGCCACAGCCGAAGCCGTCCTTAATGCGGC-GCGGCCGCAATCGCCCAGAG----------------AAGGGCTTCA-------CGTGCATTATTTGCTGGAAGTGTTTAAGTTTATTGCTCAAATGATGTTTCTAATTAGCGCCGGGGCAATAAATTAAAGTCGGCTTTTGTTTAGCTGATTTATTATTTACTAGCGCTTCAACCTCAGAC-GGGAAAATTGGTAATGAATTG-TTTTAAATCTGAGCGCTGGTAACGCTTTACCATCGGTCACCTT-----------------AGCAGGGGGGCGGGAAGGCGA ....:.xx.:.:.:.:x...x::...x.x:..:....:.:......:........:...........x......................:....:.................................:...----....:..x..::......................................::......:.....x.....x.......:...x.....x.........:.x.....::..:..:---...-...x...:.:----.::..:x.::..:..:.---.:..x.:...:......:x.:..-.x:::.::..::..:......-.....:.....:.::::.:.:...x......:...:x..x..x...........:.:.:...-......x.........---..:............x..x.:x..:.--------.....----.x.:....:.....:.::....:x..:.x-..:...:x.:.x:x:::.:.----------------...:.xx:..-------x.x...................................:..................::..:x...x.............-..:........:...................x..x..x....x....-...x.................-.........x:.:.::.x......:....:....xx..x.::.-----------------...:x:.....::.:.x.... 133M4D114M3I3M1D10M4D17M3I23M1D21M1D62M1D16M3D26M8D5M4I29M1D20M16D10M7D80M1I47M1D21M1D43M17D21M 549/701 78.3% 712/94230402 0.0% 77/701 11.0% 116442506 73772049 +97404 chr4 + 190214555 150582970 150582969 150584736 1767 GCCTTGGATCCCTCAACGTATTGCGAGACGCCGGTGTATAGCCCGGACCTGTGCCCCAACATGATCGCCGCTCAGGCCAAGCTGGTTTACCAGCTCAATAAGTACTACACTGAGCGCTGTCAGGCGCGCAAGGCGGCCATCGCCAAAACCATCCGAGAGGTCTGTAAGGTGGTCTCGGACGTGCTCAAGGAAGTGGAGGTGCAGGAGCCTCGCTTCATCAGCTCCTTGAGCGAGATCGATGCCCGCTACGAGGGGCTCGAGGTCATTTCGCCCACCGAATTTGAGGTGGTGCTCTACCTAAACCAGATGGGCGTCTTCAACTTCGTGGACGACGGCTCGCTGCCCGGCTGCGCAGTGCTCAAACTGAGCGATGGGCGGAAGCGGAGCATGTCTCTCTGGGTCGAGTTCATCACGGCGTCGGGCTATCTCTCAGCGCGTAAGATCCGCTCGCGTTTCCAGACGCTGGTGGCCCAGGCGGTGGACAAGTGCAGCTATCGGGATGTGGTCAAGATGATCGCGGACACCAGCGAGGTCAAGTTGCGCATCAGGGAGCGCTATGTGGTGCAAATCACTCCGGCGTTCAAGTGCACCGGGATCTGGCCTCGCAGCGCGGCACAGTGGCCTATGCCCCACATCCCTTGGCCCGGCCCCAATCGGGTGGCCGAGGTCAAGGCCGAAGGGTTCAACTTGCTCTCGAAGGAGTGCTACTCGCTGACCGGCAAGCAGAGCTCGGCAGAGAGCGACGCCTGGGTGCTACAGTTCGGGGAGGCGGAGAACCGCCTGCTGATGGGCGGCTGCCGAAACAAGTGCCTCTCAGTGCTGAAGACTCTGCGGGACCGCCACCTGGAGCTACCCGGCCAGCCGCTCAACAACTACCACATGAAGACGCTGCTGCTGTACGAGTGCGAGAAACACCCACGAGAAACGGACTGGGACGAGTCGTGCCTGGGCGACCGGCTCAACGGCATCCTGCTGCAGCTCATCTCCTGCCTGCAGTGCCGCCGCTGCCCTCACTACTTTCTGCCCAACCTCGACCTCTTTCAGGGCAAGCCCCATTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGGTTGGCCAGGGAAATTCTCACCAATCCCAAAAGCCTGGACAAACTATAGGGTGCTGGGGACTGCTTGAAAAGCGACACAAACGGGCGTGCTCTCTCAGACACACAACTCTGCTATAAACAGCAGAAACTCTGGACACAAACTTTTATGTA----AGTCACCTGAAATAGGAATCCGGCAGAAGACCTTCATTAATTAAGAAGCAAACAAAAAGAGAGCAACCCAACCAAAACAAATCACATTCTTGCACAAAAGTGATCGTTTTCTTCCAAACAATGTGAATTTAAAAGGTCACACAAAAGAAGCAATCGGGC-TCCGCCACCACAAAATGAAA--CCCAAGGTACATTTTCAAATCAATGTATAGTAGTTCCCCCCCCTTTTCCTTCTTTCCCCCTATCCTTTTTCTCTCCACCCCATCCCCCCCCCCATTTCGTTTTGCTTTTGGTTGCCTGAATGTTGTCACCAAGTGAAAAAATTATTTAACTATATGTAAAATTTCTCTTTTA---------------------AAAAAAAGTTTTACTGATGTTAAACGT-TCTCAGTGCCAATGTCAGAC--TGTGCTCCTCCCTCTCCTGAACCTCTACCCTCACCCTGAGCTGTCTTGTTGAAAACAGTAATAAAAACATTACTTTACATTGTAATTGACTGTTTGTGGATTGTTCTTAAGTGAAGGCAGGTGAGATC chr4 + 94230402 34138908 34138907 34140481 34138908 34138907 34140481 1574 GCATTGGATCCCTCAACGTACTGCGAGAGCCCGGTGTACAGCCCGGACCTGTGCCCCAACATGATCGCCGCCCAGGCCAAGCTGGTGTACCAGCTCAACAAGTACTACACGGAGCGCTGCCAGGCGCGCAAGGCGGCCATCGCCAAGACCATCCGCGAGGTGTGCAAAGTGGTGTCGGACGTGCTGAAGGAGGTGGAGGTGCAGGAGCCGCGCTTCATCAGCTCGCTGAGCGAGATCGACGCCCGCTACGAGGGGCTGGAGGTGATCTCGCCCACCGAGTTCGAGGTGGTGCTCTACCTCAACCAGATGGGCGTCTTCAACTTCGTGGACGACGGCTCCCTGCCGGGCTGCGCCGTGCTCAAGCTGAGCGACGGCCGCAAGCGCAGCATGTCGCTCTGGGTGGAGTTCATCACGGCCTCGGGCTACCTGTCGGCGCGCAAGATCCGCTCCCGCTTCCAGACGCTGGTGGCCCAGGCCGTGGACAAGTGCAGCTACCGCGACGTGGTGAAGATGATCGCGGACACGAGCGAGGTGAAGCTGCGCATCCGCGAGCGCTACGTGGTGCAGATCACGCCCGCCTTCAAGTGCACGGGCATCTGGCCGCGCAGCGCGGCGCAGTGGCCCATGCCGCACATCCCCTGGCCCGGCCCCAACCGCGTGGCCGAGGTGAAGGCGGAGGGCTTCAACCTGCTCTCCAAGGAGTGCTACTCGCTGACGGGCAAACAGAGCTCGGCCGAGAGCGACGCCTGGGTGCTGCAGTTCGGCGAGGCCGAGAACCGTCTGCTGATGGGCGGCTGCCGCAACAAGTGCCTCTCGGTGCTCAAGACGCTGCGGGACCGGCACCTGGAGCTGCCCGGGCAGCCGCTCAACAACTACCACATGAAGACGCTGCTGCTGTACGAGTGCGAGAAGCACCCGCGGGAGACCGACTGGGACGAGGCGTGCCTGGGCGACCGCCTCAACGGCATCCTGCTGCAGCTCATCTCCTGCCTGCAGTGCCGCCGCTGCCCGCACTACTTCCTGCCCAACCTCGACCTCTTTCAGGGCAAGCCCCACTCGGCCCTGGAGAGCGCCGCCAAACAGACCTGGAGGCTGGCCCGGGAGATCCTCACCAATCCCAAAAGCCTCGACAAACTATAGG--GCCGGCGCC--------------------CGGGCG------------CACGCCGCTCTACCCCCGGTACC----GCGGCGGCCGCAGACTGCTACGGATcggcgccgcccg------------------------------------------------cggggacggccccccc--------------------------gcgccTCTCCTCCTCCGCG------------------------AAGGGAAGCGCTCGGACTTTTGCCACGGCCAAACGAAAGCCCAAAGGTACATTTTCCGATCCCTGTATAGT----------CCTTTTCTTACTCTCTCTCT-------------------------------------------CTCTCGTCTGCCTGAATGTTGTCACCAAGTG-AAAAATTATTTAACTATATGTACAAATTGCCCTTTaaaaaaaaaaaaaaaacaaaacaaaaaaaGTTTTACCGATGTTAAATGTGTTTCGGCGCCGAGGTCAGATGATGTGCCCCACC----------------------------ACTGACTTGTTGCAAATAGTAATAAAAATATCACTTTA------ACTTTACTTTTCGTGCATGGTTCTTAAGTTCGGGCCGGTAGGGCC ..x.................:.......xx........:................................:..............x...........:...........x........:..........................:........x.....x..:..:.....x...........x.....:.................x..............x:.............:.................x.....x..:...........:..:.................x......................................x.....x........x........:........:..x..x.....x........x........x..............x........:..x..:.....:...........x..:.......................x.................:..x..:.....x.................x........x...:........x.x........:........:.....x..x..x...........x..x........x...........:........:.....x........:..............:..x...........x.....x..:..x......:.......x....................x.....:...........x....................:........x.....x........:....................x..............:.....x.....x...........x...........:.....x.....................................................:.....:..:..:..x............x................x.....................................................x........:...................................:.................:.....:............:.....x....:..:....................x.............--..:..x.x.--------------------......------------...:.x:....:.:x:x:::.x.----:.xx:..x.:..:...x:..:.x.----x.:.:..:.------------------------------------------------x.:.::.::...xx..--------------------------.:.x::x.::..:...:x:------------------------..::.....:x....:.-.::.....x:.x...:....--..x.............x:...xx........----------.......:.x..:..:.:..-------------------------------------------..:.:.x:.......................-......................x..x..x:.:....---------------------..............:.........:..-.:..:.:...:.x......:--.....:..x..----------------------------:...x.......x...:...........:..:......------.x..x...x..:...x..x..........xx:...x...::.::. 1141M2D9M20D6M12D23M4D24M4I9M48D16M26D19M24D17M1I20M2I31M10D20M43D31M1D36M21I27M1I20M2I11M28D38M6D45M 1328/1543 86.1% 1574/94230402 0.0% 255/1543 16.5% 116444062 73770493 +61558 chr4 + 190214555 150588042 150588041 150589834 1793 TCTCACCTTGGGGTCGATTTTTTTGAAGTTAGGATCCTCTTCATCCACCTCAAAATAGAGTTCGGAGGAGGTGACAGAAAGAGTGCCCTTTACTACAACAGAGGGGGCCACAAGCTGAGCTGGTGTGCTCAGGCTAACAGGACCTGCCAAAAGGAA--AAGACAAGCCACACAAGTTGGAATGACATTTTTCAAAAAATCA-AATTCGAC-----------CAGAAATTGTATTT-----------------AATCTTTTCATTCTCACGTCTAGTACTGAACTGCCTGCCAACTACTTCTACAGTTAAATATTCTGTCCACCCCAAATCTT---CCTCTGAAAATGCAAAGTCAGGATTCTCATACTACAAGATCTATAACAGGCGGTTAATGATAACAGTA---------AACTAGGATGCAATTATTTTACAGGGAGTCTGCAAAGCTTTGGTCTAATCT---CTAGGTAAGAAGTGGCTCTGCCTAAATAAGTCCATCCACATTCCATTTAGAAAACAGGCCTCAG--GCTATCTAACAACATGAACAACAACCAGGAGCAAAGAAGCCTCAATAGGCTTCCA--------AGGCCAGCAGTTAGCTTACAGTATGGTAGAGGCATGGCTACAAAAAGATCACTAGCTTATTAATGAAGTGGGAAATGTTAAACCATATTTTCTGATAGAGATTTTATGCCAGCTTGACACAAAACCTCTTCCATAACAACTTTACCCCATCAATGACTG--GTAAAAATACTTCTTTTCTAA----GCCTTCCTTTCCACTGTTAAGTATTGTTCAATGCTTCCAAATCTAATATTAGTGTAGTTCAGGGACTCTGGGAGTAAACAGCTGGAGGGTGGGTTTCCAAGTGAATGAATTTTTATTGGAATAATCAAATCTCCACAGGGCTTATCAAAGAGACAAATCAGACTGCTACTGAAAACAATAGATTCACTACAGACAGAACAGCATAATGTGTATTAGAGCTAAATATAAAATATGAACTAAAAATGTTACATATATATGTCTGTTAT--GTCTGTGTGTGTATACACACACACACACACACACACACACACACACAGAGAGAGAGAGATCGACGTAGAAAGAATTTGAAATTCCATTATCAATTCCTCATGGTATAAATCCTATAGGGGAAGAAAACAGCATAAGAGA--AGATTGGCACTTATAGTTCTGAATTAATATAGTGCCTATAAACAAGCTGTGCCTATTCAGGTAATCAATGGGTGAATAAGTGTTTCAAAATTCAGATGAATTGACATTTCCATCGATTGTTAGAAGGGTGATAGTGCTTAATCTCACATCAATCTTAATGTGTGCCAGTAGGACAATAGAAGGGATGCTCTGCGGAGATCAGAGCAGGTTTTGCCCTCTATTCCCAATGTACAAATACATTGTGTTTGCAGATGGGCAGCAGATAGCTGCAGAACAGCCATGATTTCCCAAAGCTCATCCTTATAAATGGATGAAATAAGAAGCTATGTGTTCTTTTGCTGTCTCCTTTTGCCCTCTGTACATTAGCATGTAATACTGAGAAGAAATAACATTTTTTCAATCACTCTCAGACATTCAATTACAGGGTAAGCAGACAGCTGCAAGAGCTAGGGCAGCCTAGGTCCTACAGAAGACCCCTGACAATTTCCACTTCATTTCTAACCCACACCACTTTATTAGTGTGGATTACTTCTTAATCCTATTGCCATTGTCAAGATTATATAATTAAACTCCCCTTTCACCTCTATTACTGTATGAATGTATTACTAGTAGCAA-GAATAGAAGCAAAATAAAGGAAGAAATGGGTAAATGGATGTGAAGGAAAAGACT chr4 + 94230402 34143293 34143292 34144951 34143293 34143292 34144951 1659 TCTTACCTTCGGGTCGATTTTCTTAAAACTGGGATCTTCCTCATCCACCTCGAAGTAGAGCTCAGAAAGAGTGATGGACAGAGTGCCTTTCACCACCACCGAGGGTGCCACCAGCTGAGCTGGCGCGCTCAGGGCAACTGGACCTGCCAAAGAGTACGAACACCAACCACT---GTCACAATTACTTGCTTTTCAAACCCAGAATACGATGATAAACAAAACAAAGATCTTAGCTCTTCCTTAAAAACCAAGAATCTTTTTATCCCAA--------AAGGGAACATATGCAA--TAGATTTACAGTTT----CTCTGTTCTGCGCAAAGTTGAAGCCGCTACAATTGCAAACT---GATGCATATATTATAGATGCCAGAGCTGGC--TTTAGCATGGCAAGATATGGTTTTCACTCAGACACATTTTCTTT-CTGAGAAACTTCAGCGGTTGCATTCCTTCTGTTCTATGCAATATAAGG-------------AGTGCACGCAC-CAACACTTGAAATCTTACTGTCAGATGCGTTCTG-----------------TAGGTACTGGAGAGTTTCAATAGCTTTCTACAAAGATGAAGAAAGCAGT---------------------CAAGGCTC---AAAGTTGTCTGACT-----GTGAAGTG-----------------TTCCCTCATGGA---------------TGACAGAAATCTATCGTCAAAGCTACAGAGCCTCA-CGGAGCCTACAGTAAAA-------TGTTTTAAAGATGCTTTTGATTTCAC-ATTAAATATTTTTCAAGGATTCCA--TACAGCGTTAGTGCAGCTCGGGGACTATGGGAGTAAACAGCTGGAGGGTTGGTTTCCAACTGAATGAATTTTTATTGGAATAATCGCATCTCCACAGGGCTTATCACAGGGACAAATCAGACGACCACTGAAAACAATAGGTTCGGCACAGACCTGGCAGTACGGGATCTGTTATAG---AAACTAACACACA---CAGAAAGCAGACAGGGCTAGCTTTGTCATTCGGCTGATTATG-------------------------------------AGGTAAGGAAAT---------GAAGCTTCGCAGTTGCAGTATTAGCT------GGCTTATAT-------------AAAACAGCTGAAGATATGAAAGTGACACGGACGATTTTGTTTTAATAAAGCATCTAAAAATGAGGTACACACGTTCAGGTAATCAATGTGAGAATAAGTGACAAAAAATTCAGATGAATTGTCATTTCCATCAATTGTTAGGAGGGTGATGGTCCTTAATCTCGCATCAATCTCAATGTGTGCCACTAGGACAAAAGAAGAGATGCTCTGCTGAGATCAGAGCAG-CTTTGCCCTCTATTCCCAATGTACAAATACATTGTGTTTGCAGATGGGCATGAGATAGCTGCAGAACTGCCATGATTTCCCAAAGCTCACCCCCACAAATGGATGAAATAAGCAGCTATGTGTTCTTTTGCTGTCTCCCTTTGCCCTCTGTACATTAGCATGTAATCCAGAGGAGAAATAACATTTTTTCAATCACTCTCAGACATTCAATTACAGGGCAAGCAGACAGCTGCAGAAGCTGGGGCAGTCCAGGTCCTGTAGAAGACCCCTGACAATTTCCACTTCATTTCTAACCCACACCACTTTATTAGTGAGGATTACTTCTTAATCCTATTGCCATTGTCAAGATTATATAATTAAACTCCCCTTTCACCTCTATTACTGTATGAATGTATTACTAGAAGCAATGAATATATAATAAA-AGAGAAGGAAACAGAGAAA--GCTGTTGAGAAGAAAGCT ...:.....x...........:..:..::.:.....:..:...........:..:.....:..:..::::....::..x........:..:..:..x..x.....x.....x...........:.:.......x:...x............::.x.--..x..x.:....x---..::x...x..x.x:..:xx...x:..-...x...:-----------..:.:..:x..x:.-----------------........:..:.:x.--------.xx.:.x:::x...x.--..xx.:.......x----:.....:.xx.x....x:.x---..x..:x..x......x.---...x.x:...:..:.::xx.:.x.:.x...--..x.xx..::..:x.---------x...x:..::..x..x:...-.x.:..:x..x..:x.x..xx:.::xx...---...x.:..x.x:x..-------------...x..:x...-:xx..:..::..xx:x:x:x....--..xx...:-----------------:...x:.x::::..::.......x:...:.--------.:.xx......---------------------..x....x---....x.xx..::..-----:.......-----------------..::..x..:..---------------.....x...x.:x::x:..x.:.x..xxx:..:..-.::x.x..:--......-------.x..:...----..:..:xx..:...-:....:....x.....x.x.....--.x:.:::......:..:..:......x......................x.........x.........................:x...................x..:............x:.:..............:...:x:......xx::...:.:::x:.x.:...x..---..xx...x.:.::---:.:...xxxx...x:xx..xx.:...:..--.x...xx.:..-------------------------------------..:x.::..:..---------:.::x..:.x.:..x..x...:.::.------..:x..x..-------------........xx....x.--.:.x..:...xx.:::..:..xx......x..:::...x...::..x.:::.x::...............x.x.........x:xx.................x..........:........:........:..x.........:.........:...........x........x.....:..........x.............-:.................................................xx...............x.....................:..::.:................x.........................:...........................x.x...:.............................................:...............::....:......:.:.......::......................................................x.......................................................................................x.....-.....x.x:xx...-.:..:.:....::.:x...--.x...x:..:.:..::.. 156M2I13M3D27M1I8M11I14M17I16M8D16M2D14M4D20M3I18M3D30M2D15M9I20M1D30M3I15M13D11M1D24M2I8M17D30M8I11M21D8M3D14M5D8M17D12M15D35M1D9M2I6M7D8M4I14M1D24M2D177M3D13M3D29M2I11M37D12M9D26M6D9M13D16M2I207M1D407M1I14M1D19M2D18M 1207/1592 75.8% 1659/94230402 0.0% 268/1592 16.8% 116444749 73769806 +3060 chr4 + 190214555 150589005 150589004 150589069 65 GTTACATATATATGTCTGTTATGTCTGTGTGTGTATACACACACACACACACACACACACACACA chr4 + 94230402 68064804 68064803 68064868 68064804 68064803 68064868 65 GTTTTGTATATGTGTCCTTATTGTATATTTATGTATATACAGATACACACAAACACACACGAACA ...x::.....:....:x.xx...x.:.x.:......:...x.:.......x........:x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 82524201 NA +9976 chr4 + 190214555 150590709 150590708 150590900 192 TTACCGGCAAGATTCTCTAAATCTTTCTCATCCACGGATGACAGAGTATCATCATCGCCTTCCAGGAGGATCTCGTTTTCTGAGTTCTGATTTCCTAAAGCCTGACTCCTGATGGACTGTTTTCCTTTAGCAAGGATATCTTCATCTGTGGCTGAAATGAAAAGGAAACAAAGCTGTCCATCAGTTCTGGGA chr4 + 94230402 34146034 34146033 34146223 34146034 34146033 34146223 190 TTACCCGTTAGGTTCTCCACTTCTCTTTCCTCAATGAATGACGTGATATCGTCGTCGCCTTCTAAAAGAATCTCACTTTCTGAGTTCTGATTTCCTAAGGCTTGACTCTTGATAGACTGCTTTCCCTTAACAAGTATATCTTCGTCGGGAGCTGCAACGAGAAAGGCACAGCGC--TCTGTCAGGTCTCAGA .....x.:x..:.....:.xx...:.:..x..x.:.:.....:x::....:..:........:.::..:.....::......................:..:......:....:.....:.....:...:....x........:..x.x:....x..:..:..:.:x...:x..--..::....x...x:.. 174M2D16M 140/190 73.7% 190/94230402 0.0% 2/190 1.1% 116444675 73769880 +14195 chr4 + 190214555 150593722 150593721 150594371 650 AACACCCTGCTCATTACTTCCTCTGATTATTGCCATACATGTCCTAAAGTACACCAAGCTTATGTGAAAGGAAAAAAGAAGAAACCTCTTTAATCTGCAAACATTTACAAAAAAATGAGAGTCCCCAGTGGCAATATGTAATGGTTTAAAATAGCTCAAAAAATAAATTCACATTCATTTATAAATGACCACGAGAAATATAATTATCCCTTCCAATTGCAATTAAAAAATTTTTAAATATGTTCTAATCATGCTGCCTATATTAAAACACAGTAAGGTAACTTCTGAATTAAAGTTTC-------------ATTAAAAATTTTACATA--CTATAGGTGTACTGTATG-----------------------CATACACACACCCACTTTAATTTATTTATTTACTTATTTTTACAAG---------CTCAGATTCTGGAATTGTTCAAGCTCCACTGAAAAACCTCTTGTCATGGAAAATATGCAGCTTACTGATATTTAGAATGGTTTTCCTGTAATTAACTCCCCCTTGAGGATTTTAAGTTAGCAGCAGTAAAATTACCAACAGTACTCTAATATACACCACATGCGCTGGTGTTCAATTCTCAGTGGTCTAATAGCTTTCTGCTAAAGAACCTTAAAAAA--AAATTAGAACAAAACTTTTCCAAGCATAAAATAAAGGATTATTATCATGTTT chr4 + 94230402 34147088 34147087 34147729 34147088 34147087 34147729 642 AACACATCGCTCACTGCTGCCTCGGGGCGCTGCCACGCAGGACGGGAGTTGTGCT--GCTCGTTTGAAACCAAAA------------TGTTACCGTGCAAACACTTCCAGCAGGAGGCAAGTCCCCAGTGGCGAGTTATA-CAGTTTAAATGAACT----ACATATATGCACATAAATT-----------GCGAGTAATAGACTTTGCAATT--AAGTGCAAAATAACAAAATAAAAACGTATTTCAAAAA----------ACTAAAATATCCCAAGGAATGCCCCGCAGGACAGTTTCTCCTCAGGCCATCACTGCCACTCGTACGTAAGCAATGAGTAAAAAGTAAATCATCAAAAAGCCTTAACAGCATCGTACAAACCCGAGCTTTGCTTTCTTCTACAGCATACCCGTGTAAATAATGATAACTCCGATTCTGGAATTGTTCAGCGTGAGCTGAAACCCTTCTTGTCATGGAAA-TATGCAGCT----GATGGTTAGAAGGGTTTTCCTGTAATTAACTCCCCCTGGAGGATTTGAAGTTAGCAGCAGTAAAATTACCGACAGAGAACTAACACACACCACATGCACTGGCA-------CTGCGCGGCCCAGCAGCTTTCTGCTGAAGA---TCAAAAAAGTAAAACAGAACAAAACCATTCCGTGGATAAAATAGAGGAGAATCAGCtttttt .....x::.....:.:..x....x.:x:::.....::..x.x.xx:.:x.:::.:--...::.x.....xx....------------:x...x:x........:..x..:x.::.x.x:.............:.xx.:..-::.......xx.:..----.x...x..x.....xx...-----------:....x....x.x..xx.xx..--..x.....xxx..x..xx.xx...::.:..::..xx.----------.:.....:.:xx:....x.xx::.:.x.xx.x......-------------.:.:xx.x.:x...:..--.x..::..:x.xx...x:-----------------------.:....x..x.xx:....:x...x..:xx:x:.x..:::x.::..:---------...x.................:xx.xx:......xx.:..............-.........----...:x......x.........................x........x.......................:....x:xx....:.:...........:....::-------..xx.:..:.:.::...........:....---.:......--...x:..........:x....:x.x........:....xx..:.x.x.x... 55M2D18M12D53M1D15M4D19M11D22M2D37M10D38M13I17M2I18M23I46M9I52M1D9M4D104M7D30M3D8M2I52M 407/593 68.6% 642/94230402 0.0% 106/593 17.9% 116446634 73767921 +147813 chr4 + 190214555 150596092 150596091 150601327 5236 TGACTTTTATAAATAACCACTTTGGAGGG------TCTCTGCTTGAAAAATTACCTAAAGCTTTTTT---CCCCAAGCAAGTTAATGTGAACTTGGGAAGGGCAATTAAATTGTCAGAATTAAAAAATTTGTTTTTAACTAGAAGGTAGCCAGAAGTAGAGTCATGGGGCTGGTATTGATCGCCCAAACAGAGAACATCACTCTTCAGGTATTTACTCTGCCACCTTTACACTAGAGGCTTTCCTTCAAATCAAATCAATCTATAAAAAAGAT-GGCTCTTACTACTAAAATACGTAACTGATCTCCAATGGCACTTCTATTTAGATGTCTTCC------TTTGATAATGATAATATAG----TTCATGGTGTTCTAAGATTCTGCAT--TTTTAAAATGTCCTATCTCCTTA---GTTAAATAAATTATAAATAAAAGTGAGAAGT-CATAAAAAT--ATAAGAATGACATACTATCCTCATTAATATATATTTTAAACATT----TAAATTCAACATTG--AAGCACGGTATTTATCCATGTTAAAATCTGTAATTTCAACTGCTTTTTGATCACAT--------------------TAACAATTTTGTTTTGCATACTTAATTCTTAATAAGTTTA----------------TTTTGATTAGCTTCTTTAA--------TGCTCCAAAATTTTTAAACACCAAATTAAAATTGAAT--GTCACCATAAAATATT------------TAATACACCAGTAAAAAATT------AAGCTCTT----TGTTTACA-------------------------------GAATATATTAGCATAA----ATTTTCTAAC-----ATCGAACAATACCATAATACAATCTATGTGCTGAATTTATTCCCTTTTTATTTA-AAATAAAATAAAT-ATGAGGTAGGAT--------TAGAATTTGTGTTTTTTTAAAAAATGTTATA-----------------GTAAATATTAAATATG-ATATATCTCTGAAATTGTAAGACAACTGAAGAATCTCCTACACATTTAGATTTTTAAACATATATTTCAAACGCAAGTTTTGTTTTTAACATTTTG---------------GAGTATGACAATAATCATAAAATTACTATAAAA-TATT---ACTCA---ATGCTTACCTTTGCTGTTCTCTCTCAATTTAAAAATGCACACTAAAACATAGATAATTAACATTGGATTAACCTTTCAATTACTATCGAGAGTAATCAGAGTGAAATCTACTTCTATACAAGTCAAGAGTCTTAGGATGATAGTAAAAACATGTTAATAAATTCTTTTTTGTCAAACTTTAAT-----GCAGATGCTTAGCATTAAAAAAGCTGACAAAACAATATGATTTTAAGAGCTCAA---CAATTAAAAT--TTATTCATTAAAAATCCTGTAACTCTTCAAAATGGTTAAATGTACT-------ATTTT----TGATAAGAAT---ATTTTAATAAATTCTATATTAAATCT-----ATACCAC---AAATTTTAAATTGAATTATTGA------TATCTAAGGATAAAAGATTAACAGC-CTATCTATGTGCAATT--------------TTAGAAAACAAATCCTCCCCTTCCAGATATAAAAGGAAAATGTTTTTACGAAAACATA---------TTGCCATGTATAGATCTCAGAACTCACAAATTACTGTAAATGATGGTTTAGAAGACAGAAAAATAATTAAATTTCAAATTTTAAGTGGACATGGTAATACATTTTGTTAAAAATTGCAAAAAAAGTTCACCTTCTCCATGTAAGCA--TCATTAACCA--------AAACAAACCAGAAAATC------CAAAAAAACACACAAAAAAAGAAAAAAAAACCCTCTGAAATCTGTTATCACCACCTAAAAACTATATGTACTCTAAAAGCAAAAGTGGCCTAATTAATTCTACATTTTATTTCTCTTTCTCCACCTCCTGTAGTTGAAGATGTAGGGCCATGAGACTATTATTGCTTTTAGATCACTTTGTTATTGACTATTCTCTGTATGATCATTTATTTTAAAGGACTGATGTAACATGTGGTGTTATATCTGATGACATATTGTGGACATTTTCTTCCAGAAATGGCTCTTTAAGGCTGAGTGCAAGAGGTTAAGCTGCCTGACTGAGGCCAAACCTAAGATTACAGATTTTTAATCTAAATTCTTA--ATATCCTTATTGAATATAAATTAACATTTATTTTGTATGCTACATATTTCCATTTAATCACAAGCTCCTGCATGTTAAAA----CAATACCCTGAAAAAGGAAAATTAAAAGTACTTCTGAC-TTTATTAAAAACCAATTTATATTTTATAAAGTCAGGATAATTTTAATGTGGGGAGGAGCATTTCCCCCTTAACCAATATATCTTAATTGACTTTCAAAAATCATAAAATAAGTGAAATTTT---------------------ATAAAAATTTATAGTATCAAATCCAAAGGAAATTTTCAGTTTTTCCAATTTACTTATAAGACTTTTA-----CCTAAACTGAAT--CATAGTCAT-------ATGCATTG-TATCAAAAAAGCAAAAATGTTTTGTTAAG----CTCTGATAACAAAATAATATAGAATAGGAACGTATGAAAATAATGTTTATTCTCTTTT-----TC------CATGAGCCATCTATCATAACCATCTTCAAATCAAGGCTCAGAAAGTATCTAGGCAATTGGACATTTATTATTATCTTTCCCAGTTCATGATCTCATGCTAAAATACC--AGGATTGGGCGAAAACCATGTATACACAACAGAACCTAGAAACTTATCTGGTTTGTAAATGCTGTCTTCCTGATATTCAT----------GGAT-------------TTAAGGC--------ATGCCTCCTG-GATTCATTTACT---------CAAAGCTGAATGTGTCGCTTAAAAGGAGACATATT----TAATCTTTGTACTCTGAA-----ACAAAGGG------------TCTATGTTAAGTAAGTTTTGTATGTGTAA-------------------CATAAT----------------------TAATAAATATACTTGACACCATAAT-TTAATAGGACTCTATAGTAACTATAAAAAAATTTAACTTCTCTTTCTGGTATGAA-CAACCATAAAATGTGGTG-----------------TTGGACCATTTTACAGTGCCTTGTAATAATGAAGTTATGCTCTTCATTACCAAGTCCTGTA-CCTGCTGCTATTGGCAAGGAATGGTTTATACACTGACCATGTTCCACGGCTGTTTTTAGTGTCGCTTCAGGATGTGTCGATCCTAGAGGGTTACGCACAAATCGTCGCCGGCGCCGCAAGTCATCTTCCCAGTAGTCAAGGCGCCAGAACTCAAGAGGACGACTACAATGAAACAGAGAAGCCACATATGTTAGCAATTATCAAACAGCGTGGTAGCACTGAATTTCTGCATAAAGCTCTCCTTGTTTGCTCTGCCTTTTTTTCCCTCTCCTTCCACTTAATTCTCCCTCCATCTCACACTCCCCTTTCTGCAATCTTTAACTTAGGTATGTCCTTGAAAATAACAATATCACCTTCTAGTCTAAGGAACTCCTTTTCCTTTT--CTTGGAAGGTGAAATGAGCACTAAATACATCATTTTGAAATGAATTGCTGACAGTGTGATCAGTTTCCCCACACTCTAGTGGCATGTGCTCTGATTTCAGCCTCATTTCAGCCTCAGCAGGGCACCTTTCTCTGTAGCTGCATTTATAAACCAGAATAGGGAAAAGGCTATTATAAATATGGTATAGCATTACCTATATTAATCAAAGTCCGTCCCCCTTCATTTTTCTTCCTAATTTGTGCCTTTTTGCACAAGGTCAGTAAATCATACCATGAATTCTTGGTCCAGAAAGTGTTAACTTTAATGAATATCTCAGTTACATGGTTATGTATGTGATAATAAAATATTACTCTGTTTAGATGTGCAGGAATTTAATTAAAATAATCTCTTAAAATATTCATTACATTTAGCCCCTGAGGCTTAGAACAACACAAGAAAATGCATTTCTTTTCCATTTACTGTTTTTAAATAAACCATTCCTGTAGAGTGAAATAGCAATCTATTTTCAAGCAAATCAGATTGGATTTCTGTTTTATGTA-CTCTGTTTTTATATTTAATTAAAAACTACATGCTATATGATGTGCAATAATTGCTATATCAAAAGCATACTTTTGGAAATGTATTTTTTAAAAAAAGGTTTGCTCATTTCAAATTCTATATTT-----------CCCCTATTACATACACATTTT----ATATGGCAATATATAAATGTCAGCTTTCTCTCTTGTTAACTAATCATGATCTAG---CATGCTGGAAAAATATTTTA---TAAGGAAAATACTAAA---------GTGTTTTCAGTTATAGTAAGA-----AAAAAGTCTCTGTAGAATACATTAATT---CAATAAAGATATACAGCAGGAACACCTGTAAGTTTCAATAATGAAATTAAAAAATTATTCATAATCAAAACTTCTTCAGGAATGACTAAT-ACAAAATACA---ATCTTACTTATATTTCGGGAGCTAATA-AAATTGTATCTGTCAGCTTTGACAAATTAGTAGTCTTCAACAACTGACAGTCCC--------AAACTACCCAAGTAAAAGTTACCTTTATTTTGATGTTTTAAAGATGTTCTCTTTAAAAATTCAAAATAGGTTTAT-------------AAAT---AAGTACTTTTATCAATTAAA-----AACTAT----------CTTGTATTAA-----------------TAAAAAGCATAAACAGT-ACGTTATTTAAAGAAAATCTTTTTAAAACAGTAGAGACTGATCTCTGAAAATGCTGAAGGGATAAGAACATCAAATAT--TTCCTTGGGTGATTTTGGTCAGGA--GAAGGAGATATAATGTAA------------------TCAAAATGTAATACAAAAAAAGTATAAGAATTGCAGTTCTCAAAAAGAAAAATTTAAAAAGCTATTAT------TATATATTTCTTCATTATTCTGTCTAAATTTGAATAAAAACATGATGATATTATTTAAAAAT----AAATAAATACCCACAGAATATACATACAATCAAAAGACAACAGTTGTTTTAA--CTCAATTAATAAAATGAAATTCTCCTTAGGTGA--GAAGGAAAAAGGCAGTACACAGATGGCTGTGTGTATGGCTTTGATAGTCATGGAGCTTGGATAGGCACTTCATCATTCTGCCTACCTACATTTATCTGTTAAAATTATTATCAAATATCAGCCAGGATGCAGTCGTGAATCACAGGCTGCTCCTCGCCTTCAGGGGAATGATACAATGAGGGTCTATTCATCAGTGCGGCAATCGGCACAAGTAATTAGTTCCCTAGACTGAGATCTCCTACAAAGCCTATTTCAGTCAGCACCACAAACATATGACGATGTAAAGCTAATGAAAGCTGCTCAAATTTGTTAACCTTTTCTGCCATCTATCCTTCTAATACTCTATGCTTCAGTATTATGCAAAGGTAGTAAATTATTAATTTGTCATTCATCCATCCTTCTACATTTTGAGTCAAATTAAATGATGTCATTCTTCTTGATAACAATTAAAATTATAAGAGATGTTAAGCTGCTATGATAAAATTATGACTAAATTAGGTAACAAT chr4 + 94230402 34149792 34149791 34155267 34149792 34149791 34155267 5476 TGACTTTTATAAATTCCCATTTTGGAAAGATTTTTTTTTCCTTTGAAAAATTACCTAAAGCCTTTTCTTCCCCGAGGCAAGTTAATGTGAACTTGGGAATGGCAATTAAATTGTCAGAATTAAAAAATTTGTTTTTAACTAGAAGGTAGCCAGAAGTATAGTCATGGGGCTGGTATTGATTGTCTGAACAGAGAACATCAGTCTTCAGGTATTTATTCTGCCACCTCTGCACCAGAGGCTCTCCTTCAAATCAAATCAATCCCTAGAAAAGATTGGTTCTTGCTACTACGACGAACAACGAGGCTGCAACAGAGCTGATTGTT-GTTGTTCTCTGTAGGTTTTACCAAACATTATCTAGGCTTCTGATTGTTTCCGAAGCTTTTTCACAGTTTCAAATTGTCATCTTTGCATGAGTGTGAGACACACAGCAATTTGGGACAGGGAATACATCTGATTTGATTTGCAAGACACCCAGCAGTTGCTAATGTGTACTT--ACCAGTGTACTAAAATCCATGCTACCAAGCATGCAATTGTACTTTGCCATTATTTATGCATTATTTTCCCTTTCGGCAAGATCCTCTATGTCCAATTTCAGGTATTAGTTTTGTTCTGTTTTCTT--TTTAGAAAAGCTTTAAGAGGCAGTAGGGAACCTTTGATTCATCATTTTAAAATGCTTTTTCTTCAGAGACACATAAAAATTAATTGAAATAGAATAAGTAACGATAAATTATTGATAAGTAATCATAAAACATCAAAGAAAAGCCTGCTGCAAATTCTAAGGATATTCACATCCTGGAACCAGGACCTGAAAACCTGGTTATGAAAATCTGAAAACAATGCTATTTTCTGACCTGAAATTGGTTAATACCAAAAAAT---------------TGTAAGCACATTTTAGAAACAAATAGACCAAATGATTATTTAGGCTGACCCTTATGACAACTGTATCCTTTGacacacacacacacacacacacacacacacacacacacacaacgcacacacatacCAACAACAGCAAAACCACTTTTGTATTTG-TATACATT-ATATGT---AACTTCTAGTTGAACTTCAGTTTCTACTTTGGTCATCTTACGCCTTGCCAGTGGAGAGTCTGAGAACAG------GAGTGCTGCAAACCTATCTACACTCAGGCAGACAGTCTTTAGCTGTACTTTCAGAAATCACATAAGTAAGGTAAAC--TAGAAAATTCACTTGATAT----------ATAAATAAACAGAATGCCAAGAGACAACTAGGGTATTATGCAA----------TTAAATTCAGAATAAAATAACATCAAGAAATTAAATATAACTGAACACTAATCAATGTCAAATGCTGAACAGAAGGAA---TGACAAAAAAA----ATT-----AGCCCTATTTCAATTACCATGGTTAGCTATCAGCTATGCTTTA----TCAGAGAGGGCTACCTCTATTCAGCTTTATTTTATATTGACAAAAATTGTACTCCTGTCAATTACAAACCAAGTATGAGTGATAGCCCTTGAAACATTGGCATGGATTAATGAAAATATCATGTCACTAGGAAAGATGAATAATTCTGTTAGTGTGCACTTATGTTTCATTCCTATGAAAAAATAAGTTACATAAATACAGGTAGGAGGTGTAAATATTTTGCAGTAAAAATAAGAATTATTTTTCAATGTTTTGTT-------------AAACAATATAAATATTAAACAGGAACGCATGAGGAGAAT---ACTTCAAACTGTGTCAAGAC---------CGATTTAATCTAAACTACACAA----------TTTTTAAAGGGGGCAGTTCTTTATCCAGTGGCATTAAACAGA--AAGAAATCTCATGTCATTAAAGTCCACGGCACAGAAACAACAAACAGTAT-------------------TAAGAACAACAAG--CCCCAAAGCAAAAAGTGGGTTAATTAATTCTACATCTTGTTCCTCTTTCT---------ATAGAGAATGATGTAGGTCTCTATGAACATC---GCTTTTAGATCACTTT---ATTGACTATTCTCTGTATGGTCATTTATTTTAAAGGACTGATGTCACATTTGGCATTATATCAGCTGACATATTGTAGACATTTTCTTCCAGAAATGGCTCTTTAAGGCTGAGTGCAAGAGGTTAAGATGCCTGATAGAAACTAACTTTATGACAGCAATGTTCT--TCTATGCCCATACAACAGTCTTAATAATTCTAAATTAGCATGAAGTGAATGT-CTACATGT---------ATAATATGTG--TGTATGTAAATATTTGCTGTAGTTCACAGACTAAAAAAGAAAAATACTACTTACATTTAAATGACTCTAATTAGTGATGTGCA-------------TTCAA---GGGGAAGGGTACT-----------------GTTTTAATTGTAATCCaattatttttaaatataataaatatttttCTTCATTGGATCACGAAGACAAACATTC-TAGACTAAAACCCAAAGTTCACT---AGCTTTGGATTTTTATCTTTTGGATTTTTAGAGTTCCGAAAGCGAGTGCTGCATTCATTTTGTAAATGCATTCCTATAGACCAGATAGCAGCACGTAGCTGAGTGATCACCAATAGTAAAATGA---GGGAAAAAAACCTGTTAAAA----ATGTGATCTGTTTTGAAAATCACCAGACAGGAGTCATCAGT----ACCATTTAC-------TGTTTGAACAATA-CTTTACGTTCTGGCATTTGTTACTATTTCTTCCGTATCAAATTCTTA--CAGAAATCCTTGAGGATT------------TAAATACACACAAGGTCTGAATAACAT-TTAGCTCTAGAAGTGTTATTTTT---GTTTTCATCTGTCTGTAAGGATAGGCAGATACAAGCTAAGGCTAACTGAAATACCCGCTGCGAATCTCTGACTATTGTCTTTTGAAGTTGC-TGTGTCA-TAAACAGGTAATTTACCACAAGAATGTCTGTCCACGGAGTAATGGCAAAATGACATGCCCTTCTGCTGTACTTAGTAAGAACTGCATTTGTAATCACCGTATGCAAAGCGTGCACAATGAGCCATCTCTCAGCTAAGATGTAATGAGGGTGCTTAACA----AATACCAGCATCACT-TACAGTAAGCAACGGTCAGTTCATCTGC--------GTACGGAGCAGGTCCAAAACGTGGTGACAAACCTTTTGGCGTTTGGGACAATTTTATAGCACCTTCTAGGAAGGAAGGTCTAACCTTCCCT-CCAGGTACTGTAACCTGCTGCTATTGGTGAGAAGCAGTTTTTACACTGACCATGTTCTCCGGCTGCTTTTAGTGTCGCTTCAGGATGTGTCGATCCGAGGGGGTTACGCACAAATCGTCGCCGGCGCCGCAAGTCATCTTCCCAGTAGTCAAGGCGCCAGAACTCACGAGGACGACTACAATGAAACAGAGGAGCCACATATGTTAGCAATTATCAAACAGCATGGTAGCACTGAATTTCTGCATAAAGCTCTCCTTGTTTGCGCTGCCTTTTTTT-----TTCTTCTTTTTTAACCTCCC--------------CCCTTTCTGCAATCTTTTACTTAGGTATGTCCTTGAAAATAACAATATCACCTTCCAGTCTAAGGAACTCCTTTCCCTTTTTTCTTGGAAGGTGAAATGAGCACTAAATACATCATTTTGAAATGAATTGCTGACAGTGTGATCAGTTTCCCCACACTCTAGTGGCATGTGCTCCGATTTCAGCCTCATTTCAGCCTCAGCAGGGCACCTTTCTCAGTGACTGCATTTATAAACCAGAATAGGGAAAAGGCTATTATAAATATGGTATAGCATTACCTATATTAATCAAAGTCTGTCCCCCTTCATTTTTCTTCCTAATTTGTGCCTTTTTGCACAAGGTCAGTAAATCATACCACGAATTCTTGGTCCAGAAAGTGTTAACTTTAATGAATACCTCAGTTACATGGTTATGTATGTGATAATAAAATATTACTCTGTTTAGATGTGCAGGAATTTAATTAAAATAATCTCTTAAAATATTCATTACATTTAGCCCCTGAGGCTTAGAACAACACAAGAAAATGCATTTCTTTTCCATTTACTGTTTTTAAATAAACCATTCCAGAAGAGTGAAATAGCAATCTATTTCCAAGCAAATCAGATTGGATTTCTGCTTTATGTAGTTGTGTTTTTACATTTAATTAAAAACTACATGT--TATGATGTGTAATAATTGCTATACTGAAGGCATACTTTTAAAAAATTACATCT--AGAAAAGGTT-----ATATCAAATTCATTATTTTCCACTGTATGCTCCAAATATATGTAGATCTTTTTAATATGGTCATATATAAGTGCCAG-TTACTATCTCGTTAGATGATCATGACCGAACGCCATTGTAAAACAATATTTTAGCCTAGAAAACATACAAAAAACCCCCCCGCGATTTCAGAAATAGCAAAATAAACAAACAGAAAACGCCCGACACACCGAATAGGCATGATAGGTTTATAGCCTGAAAACCTGTATGCTCAAGTTATAAAATACTGGCTTTGTTTGGTAACGTAACTAGTACTAAAACAATAACTGGCAATGTACATATATTCCATCCCTGGGCCGGGAGCTAATAGAAAGTATAGCTGTCAACACTGACAAATGAATAGCCATAACTAATTTACAGATCCCAATGTTAAAAATACCCAA--------TATCTATATTCTTAGTTTTGAGA---------TCTAAAGGCAGAAATTAGTTTTATTTAACGTACACCCAGATTTCAAGCACACATAGCAACAAAAGCCACAACCATTTGCACGGCCCTCCTTTTAAGCACAATTCATAGATATTAAAAAGCTGACAAAATAATCCTATATAAAAAAA--------AAAAAAAAGGAGTCT-ATCTCT---------------------ACATCTAGCTTTGTTAGATGTGTGCCTTTTCCTAACATCAAGGAAAATGCAGTGCTATTCTTCATCATCCTGATTTCCAAATTTCAGAAAAAATAAGTGT-----TTGC----------AACAAATATCTCAACATCTTATATTTGCACTTTGTGTGTTACAATCATGCTGC---AATTTGAGT---GCTTTGATTATAAAATCTACTGGTTTTGGAATAATTAACCAA-------ACAAAGCAGCATAAAACACAGGAAGATTCAAAGCTCGATTAATAACTTAAAATTCTCCTTTAGTGATTATAGAAAAAAGGCAGAACGCAGCTGGCTATGTGCATGCCTTTGATAGTCGGAGAGCATGGATAGGCACTTCATCATTCTGCCTACCTACATTTATCTGTTAAAATTATTATCAAATATCAGCCAGGATGCAGTCGTGAATCACAGACTGCTCCTCGTCTTCAGGGGAATGATACAATGAGGGTCTATTCATCAGTATGGCAATCGGCACAAGTAATTAGTTCCCTAGACTGAGATCTCCTACAAAGCTTATTTCAGTCAGCACCACAAACATATGACAATGAAAAGCTAATGGAAGCTGCTAAAATTTGTTAACCTCTTATGCCATCAATCCTTCTGGTATTCTGTGCCACAGTATTATGCAAAGATGGTAAATTATTAATTTGTCATTCATCTATCTTTCTACAGTTTTGATAGAATTAAGTGTTGTCATTCTTCTGGATAATCATTTAAATTATA--CTATATTACAATGCTATGTTAAAATTATTAGAAAAATAGGAAACTAT ..............xx...:......::.------.:.::x:...................:....:---...x.:.......................x..........................................................x.....................:.:.::..............x..............:..........:.:...:.......:....................:x..:.......-..:....:......x:.::x::...x::x..x...::.x:..xx.xx..-.x...::..:------...:x:..xx..x..x...----:.x..x..x.:.x...x..:.x..:--...:...x....x.x.:.x.x.:---..x.:.:.x.:x::..x.x:::::::.:.:.-...xx:.x.--..xx.x.x....:x.x::xx.:::....:.:..:..--.x..x.----....x..x.:::.:--.....:.xx...xxx.:x..::.xx..:.:.:xx..xxx:.x.:...:.::x.x..--------------------..x:.:.......:..:x.x...--..:xx..x.:x....----------------:.......x:::x:.....--------.x..:..:.:x:x:xx..x.x:x....:....x....--..x..x.....x....------------...x...:..:x:....:::------..::...x----.:..:...-------------------------------...x..x.x.:x.:..----.......:..-----..:.:x:.......x..x.:---------------.x..xx.x.x.....xxx.-.....:.x:....-..x.xx....x.--------.::x.x:...:.::...x.x.x.xxxx:.:.-----------------::.x.:.:xx..::::-.:.:..x:.x:x..:x.:..:..x...xxx.x..:.x-..:.....-.x..x.---...x.x..x..x..x:x..:x..:.::...x:x...:..:---------------....x...x..:.:------:.x.:..::...x-...:---.....---.x:.xxx.:..x.....x..:..xx..x.:.x.x.x.:.x:x....x--....x....x..x.x:x..----------..x.x..xxx...:.:x:x....xx..x.xx:x.x:...:...----------...::x.x.x.:.....xx.::.:..x.....xxx.x.x::::...x:....-----x..:.....x.:..xx.::..---........x..----...-----...:.x.---......xx..--...x::..:.:xx..x..x..----.:x:.:.x..:..xx.x..:.-------.....----...:..:...---.:.::x:.x....x:.x.::..:.x.-----...x.x.---...:x..::xx..:....x...------:..x.x.xx.x:......x..:.::-..:.:x:......x..--------------.x.:....:..:.:x:x:xxx.x...:..x:.::x.x....:....xxx.x...x...---------..x.x....x.x.x.-------------..x:.x.:.....:x.::x:x:...x:..x:.::.x...---.:......:.x.:xxx:...---------.:x...:x.xx...:.:..x..----------..:.:x.x.x::...--..x...x...--------.....:.--.::.....------..xx...::x...::x.x.::..x..x....xx.x.-------------------...:...x.:.x.--.:.:...:xx........x:...............:..:..:........---------:...xx:.x........x.:x.:x..x:..:---................---...................:........................x....x...::.......x.x...........:..................................................x.......:x..::.:..x::..x..:x:..:xx..:.--....x:::.x..--.:.x:....x.:.x.x.......:...xx.x.xx:.:.-......:.---------..x.:.x.:x--..:....x..x.----.x:..x::::x.:.xx:....xx....:....x..x..-....xxx:.xx.:....x:.:x.x.::.-------------..:..---.....:.:.:.:.-----------------:.:.......xxx.:...xx..:x.x.....x:xx....x..---------------------.:...x...:-...xx.x...:......xxx.:.---..:...xxxxx....::.x.x:..:.....-----..x...x:..:.--:::.x....-------.......x-...x:.xx.:::.:x.::::x.x.:.:..----.x.::...::.....:.---:.:.x.::...x.:.x....----:.x.:x...x....-----..------..x...:....x:.----.....:.x.-------x.:.:::.x.:..-..xx:.:x.:x.:.....:...:...:.:.:..:xx...x:x...:.--.x:....x.:--......------------.:x.......xx..:x.:x.:x...x.-.:x.x.:.:x..:..:.:.:..:---:.x.....----------....-------------:......--------..:..:x...-..x..x:.x...---------::...:..x-......:-.x..x...x:.:x..::----x...x.:...x.x.x..:-----:....:x.------------x..:.::.x......xx:..:..x.....-------------------..:...----------------------....:.:x:.:...:...----...-::.::.xx...-..:.....x:.xx::xx.:..:.x..x.--------...:.:.-..:x:x:....:......-----------------.x....x......:..::....x..:x..x....x.x.:x:....x:.-...:..x.....-..............::..:.:::....x................:x......:..............................x..:..................................................................x........................:..............................:........................................x............-----.:....:x:..x.x:.....--------------.................x.....................................:..................:......--...........................................................................................:........................................x..::.........................................................................:.............................................................:.....................................:.........................................................................................................................................................................x.x......................:........................:........-:.x........:....................:--.........:.............:::..:..........::...xx..:x.:.--.:........-----..x........xx.....-----------.:..x.x..:..::.x..:..----......:x........:..:...-..x..x...:....:x.:.......:.x.:---...xx.::..x.........---..:::..x....x...---------.:.x......xx....:..:.-----...x..xxxx:.:xx:.:...:::.x.---..xx.x..:.x..:...xx...x.......x.:.:x.:.x..:....xxx::xx..:..::xx.x.:x....xx.x.x::..::.:x.x.-:...x:....---..:::.:::x.:xx:............-...x.:..x......:.x:........x.:...:.x.x.x:..:.x....x:..--------...x.......--------..:..x....:.x.xx...x.:.---------.:....:::xx...x...x.....-------------.:..---...:..x:x..x...:x...-----...:..----------..:x.x....-----------------........xx.x.x.:.-.:x:...x....:...--------....x.:x:...x..-......---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29M6I32M3I203M1I49M1D10M6I19M4I25M2I23M3I31M1I9M2I36M2D6M4I14M2I56M20I23M2D15M16I19M8I37M2I16M12I20M6I8M4I8M31I16M4I10M5I20M15D19M1I13M1I12M8I31M17I16M1I37M1D8M1D6M3D40M15I14M6D13M1I4M3I5M3I47M2D19M10D43M10D52M5I21M3D11M4D3M5D7M3I10M2I21M4D21M7I5M4I10M3I26M5I7M3I22M6I25M1I16M14I58M9I15M13D39M3D20M9D22M10D15M2I10M8I7M2D8M6I36M19D13M2D50M9D31M3D16M3D165M2D12M2I38M1D8M9D10M2D12M4I38M1I28M13D5M3D13M17D42M21I10M1D23M3D30M5I12M2I9M7I8M1I29M4I17M3D20M4D14M5I2M6I14M4D9M7D13M1D47M2D10M2I6M12D27M1D23M3D8M10I4M13I7M8I10M1I12M9I9M1D7M1D17M4I18M5I8M12I29M19I6M22I18M4D3M1I11M1D28M8D7M1I18M17I48M1D12M1I263M5D20M14D81M2I539M1I33M2D53M2D10M5D18M11I21M4I23M1D30M3I20M3I16M9I21M5I27M3I90M1I10M3I27M1I54M8I11M8D23M9D24M13I4M3I20M5I6M10I10M17I17M1I16M8D15M1D6M21D11M2I24M2I18M18I25M5D4M10D24M6I23M3D9M3D24M4I14M7D31M2I33M2I457M2D47M 3604/4884 73.8% 5476/94230402 0.0% 944/4884 19.3% 116446300 73768255 +3144 chr4 + 190214555 150617502 150617501 150617584 83 CATGGTGGCAGGCGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..:.x....:.:.........:x.:........x.xx.x...x.:.........:::..x:xx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 74584305 NA +3518 chr4 + 190214555 150618838 150618837 150618890 53 ATGTGTGTATGTATATATATATATATATATATATACACACATACACACACATA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...........:.:.:.:..x...:x.:....:..................:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 127371116 62843439 +3083 chr4 + 190214555 150618846 150618845 150618897 52 ATGTATATATATATATATATATATATACACACATACACACACATATATATAT chr4 + 94230402 61270775 61270774 61270826 61270775 61270774 61270826 52 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTAT ...x......x.:.......:.......:...:......x...:x:..:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 89348071 NA +51993 chr4 + 190214555 150627851 150627850 150628724 874 ATATGTTTCCCCTTCTACTTTGACCCTCTTTGAAGTCAACTTTTCAAGGTCCATTATCAGATGGAATGCAGTAGTAAAGATTTTATGACACTATACTA----AATTTTTATTATTTCATTGAGAAAAATTGTAATAATAAAAAGGATTAAGATCTA-------------TTTCCTTTTTCGCCATGTTAAGCTTTTAAGCTTTTTTTGCTTTCATCAATTCCAATATACCATAAATCAAAAGTATTCTTCTTTTAATCCCAACA-GTTGACAAAATAATGCATTTTACACTTGAATATGCTCAAGGAAAAAAATTAACATTCTTTATCATTTCCCAACAGAGACAGTTAATACTCTAAGGCCACATTAATAGAATCTTTCTGCCATTGTAGAAAGTTTGATAGCACTCCTATTTCAATGTCTGAATTTTTCTCCTTTTTTTGACAAAGACAAATGATTGCCATCAATCAAGATCCAATCGGGTATAGAGAGAGTCAGGCAAATGCATCACTCTTTACTGGTTTTCTTGTTATTTGAGCAGGCTTTGCTCCATATTATTTTATAGAATGATCAAAAAA--CAGCCATAAGATAGATCATTCACACCCACTGTAAAATTAACTTTCACGAATAAT--GAGTTTTAAACCTCAGATAATGTATATGTTATACCAACGATATTACT-GAGTTCATTCCTGGCTAGAGATTATGTAAATGATACCATATGACCTTTATCATTAC-AACAGGACATGCAAAACACATATTATTTCATACATCATTTTAAAGCAAGTCAGTTTCTAAAGGAAAAATCATCATTTATAATCTGCATGGTGAAGTGTTAAAGTTTTGAAAGAAAGA--------------AGTATCTCTGAACCATGAGTCCTTCTTTTAACCTGTTACTT chr4 + 94230402 34168342 34168341 34169239 34168342 34168341 34169239 898 ATCTATTTTTTGCTCTTGTTCAACCTCCTTTGAAGTTAGTCTTCAAAGCTTCAATATCAATTGGAATGCGGCATTAAGGATTTTACGACACTATGCTACTTAAACTTTTATTGTTTTGTTGAGAAA-----TCATAATCAGAAGGATTAAGCTCTTGTATGAGGCTTTTTTTCTCTCTTTTCTATCTT---TTTGTAATTTACTCTTTTTTCTTCCAAACCCATTGTGCCATAAATCTGCAGCACACC-CTCTTAGTCTTTGCACATAGACAAAATAATGCAGTTTACACTAAAACATGCACGAGAAAAAAAATTAACATTCTTTATCATTTTCTAGCAGAGACAGTTAATACTCCCAGGCTACATTAATAGAATCTTTCTGCCATTGTAGAAAGTTTGATAGCACTCTTATTTCAACGTCTGAATTTTTCTCC-TTTTTTGACAAAGACAAATGATAGCCATCAATCAAGATCCAATCGGGTATACACAGAGTCAAGCAAATGCATCACTCTTTACTGGTTTTCCTGCTATTTGTGCAGGCTTTGCTCCATATTATTTTATAGAATGATCAAAAAAAGCAGCCATAAGATAGATCATTCACACCCACCGTAAAATTAACTTTCATGAATAATGAGAGTTTTAAACCTCAGATAATGTATATGTTATACAGAAGATATTGCTGGAGTTCATTTCTGGCTAGAGATTATGTAAATGATACTATATGACCTTTTTCATTACAAACAGGACATGCAAAACACATATTATTTCATACATCATTCTAAAGCAAGTCAGTACCTAAAGGAGA----ATCATTTATAATGTTCATGGTGAAGTGCTAAGGTTGCAAGAAAATGATATAAAGTACTTGTGATATTTTTGACCACTCCTCCCCCCCCCTAACCTGTTACTT ..x.:...:::x:...xx..::...::.........:.:::..:x...x.:..x.....:x........:.:.x...:.......:........:...----..:.......:...::........-----.x.....x.:..........x...x-------------....::.:..:x.:..x..---:..x...x:.x:.:..x:..::x:...x:...x.:.:.........x:x..:.:x.:-..:...:..::x:..-:.x..............x........x:..:....x.:..:..........................:.:.:..................:x....:..............................................:........:................-......................x............................x.x.......:............................:..:......x.........................................--.............................:................:.......--..................................x:.x......:..-.........:..........................:...........x.......-.......................................:..............x:........:.----............x.x............:...:...x::.:.:..x..--------------::...:.:...x.xx.xxx:..::.:::............. 98M4I24M5D25M13I19M3D57M1D15M1I169M1D142M2I54M2I47M1I56M1I66M4D47M14I41M 720/860 83.7% 898/94230402 0.0% 52/860 6.0% 116459509 73755046 +3698 chr4 + 190214555 150629499 150629498 150629581 83 CATGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAGATCACTTGAACCCAGGAGGCGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......:...........::........x.xx.x::.x.............:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 74596302 NA +3737 chr4 + 190214555 150629828 150629827 150629925 98 ACGCATGGTGGTGGGCACCTGTAATCCCAGCTACTTGTGAGGCTGAGGCAAGAGAATCACTTGAACCCTGGAGGCGGAGGTTGCAGTAGCCAAGGCCA chr4 + 94230402 76033194 76033193 76033289 76033194 76033193 76033289 96 ATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCA .::..::......--...x....:.:...........x:........x.xx.x...x...........x.:..x:xx:..:..:..x.xx::.x.... 13M2D83M 67/96 69.8% 96/94230402 0.0% 2/96 2.1% 74596634 NA +3482 chr4 + 190214555 150632091 150632090 150632173 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::........x.xx.x...x::.....:.....:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 74598894 NA +3110 chr4 + 190214555 150633986 150633985 150634057 72 GTGCCTGTAATTCCAGTTACTCGGATGGCTGAGCCAGGAAAATCACCTGAAACCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:......:....:.:.x.........xx.x:..x...:....x....:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 74600780 NA +3015 chr4 + 190214555 150636157 150636156 150636209 53 GCTTTTTTTTTTTTTTTTTTTTACGTGAATTACTCTTTCTCCCTTTGTAATTA chr4 + 94230402 76649606 76649605 76649658 76649606 76649605 76649658 53 GCTTTTTTCTTTTTTTTTTTTTAAGTGGAATTCTCTTTCTGGTTCTGTGCTTA ........:..............x...:.x.x........xx:.:...:x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 73986551 NA +3224 chr4 + 190214555 150639735 150639734 150639811 77 AAATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGTG chr4 + 94230402 22600196 22600195 22600272 22600196 22600195 22600272 77 AGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:.:.:....x:.:..::.x.:.:..::...:.x.x....:.....x.............::..::.::.:x... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 128039539 62175016 +3095 chr4 + 190214555 150639737 150639736 150639809 73 ATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTG chr4 + 94230402 22600200 22600199 22600272 22600200 22600199 22600272 73 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:.:....x:.:..::.x.:.:..::...:.x.x....:.....x.........:...::..::.::..x... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 128039537 62175018 +3437 chr4 + 190214555 150639743 150639742 150639834 92 ATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....x...x....:.:.....x..x..::x.xx...:.....::x::x:x:..:::...:.x:x...................:.x..x.. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 60826774 NA +3172 chr4 + 190214555 150639754 150639753 150639825 72 TATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x.:.:.:.....x:.x.....xx..:....:....:....:...:....::.:x.:.:.x:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 108890658 81323897 +3084 chr4 + 190214555 150639766 150639765 150639821 56 TATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTA chr4 + 94230402 92759686 92759685 92759741 92759686 92759685 92759741 56 TACATTGGTGCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGTA ..:..xx:.::.:..x....::.....xx.x......................... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 57880080 NA +3159 chr4 + 190214555 150639794 150639793 150639868 75 TATATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .........:.:...::...x.......:xxx.x..:...:xxx:...:.:...:.......:...x..:.::.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 110702619 79511936 +3159 chr4 + 190214555 150639796 150639795 150639870 75 TATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .........:.....::...x....:..:xxx.x..:...:xxx:...:.:...:.......:...x..:.::.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 110702621 79511934 +17480 chr4 + 190214555 150641526 150641525 150642080 555 TCTTTCACACAGTTAAAATAGGAGAATAAATTTGCAAATAAGGTTTCATTTGCCTATTTTCTTTTT-----TTTCTTTGCAGCAAAAAGAT-TAAAAACATTTTAGCCCTTCAATGTTTAAGTTCAAGTGGAACTATCTAAACATCACATCA----ATCAATACCTTTATATG--------TTCTTCTTTATATGCACAAGGGCAAGAATTAGTTTAGGGGTATAGGAGTTGGTTACAGTCATTATGCT-CTAATGTGGCAAACATTA--GTGTCAATTTAAGTAAACTCTAAAGGGTTATGAGGTCAAAATGCAAGACTGCATAATTTATCAGATCAAGCAAATCACTTTGAAAGTACAGAAATAAGTGAAGCATGAGGCT---ATTACTGCCTCTCATGAATAAAGGTTAATACCAATGTTTATTTA-TTACACACTGGATGGTATTTGCTATCTAAACTTTATTTATTAAAATAAGTATTTTGCTACACTGTCATATTTTAAACTACTGAGTCA-----AATTTAATTTACAGCACTGTCTTA----TACTAATACAATTAATACAGTATTCTAAGTTTTAAACAA chr4 + 94230402 34173043 34173042 34173617 34173043 34173042 34173617 575 TCTGCCATACAGTAAAAACAGAAGTTTATATTTCTCAATACTTCCTTGCTTCCTTGTTTACGTATTCCAAATTTTTGAGCAAACAGAAGATATGTAATGATTTAATCCCTAAAACACTT---TTCAAATGGCAGTGTGTGTATATCATGTAATTGAATCAATAAATTTTCATGGCTCAGTGTTTACCTTTTGCTGCA---------GAATAAATT--GTAGTACAAGAACTGGTTACAGCCATTATACTGCTAATGTGGCAAATACTATGGAGTCAGTTTGAGTAAACTCTACAGGGTTATAAGGTCAAAATAGAAGACTGCATAATTTATCAGATCAGGCAAATCATTTTGAAAGTACAGAGTTAAGTGCGGCATTAGCTTGAGATTACCGTCTTTCATGAATAAAGGTTAGAATCAATGTTTATTCAGTCATACTATAGATGGCATGTCCTGTATAAACTTCATTCATTTAAAGAAATCCTTCTTGACACTGTCACTATTTACAACACTTGAACATAAGTAACGCAATGCATACCGTTCTTTTAGGACTACTATCCCAAATCATCTAACATTGTTGATCTTACAAAA ...x:..:.....x....:..:..xx..x....x:x....xxx::.:::..x.:.:...x.x.x..-----...:.xx...:xx.:.....-.:x..xx....x.x....xx..:::..---.....:...x.x.:.x.:x.:....::.x.----.......xx...x:...--------..:x:....xxx....---------....x.:..--.x:...:.:..::.........:......:..-.............:.:..--.x....:...:...........x........:..........:x........................:........:..............:x......x:....x..x:.---.....:.:..:................:x.:...........:.-.:.:..xx.:.....:..x.x..:.x.......:...:...x...x..:.x:..:x:x.........:xx....x.x:...x::x..-----..:x:...x:.:.x.::.x.:...----.....x:x...x.x..x:.::...x.x::.:...x.x.. 66M5I20M1I27M3D30M4I17M8I16M9D9M2D32M1I18M2I112M3I44M1I87M5I24M4I39M 383/541 70.8% 575/94230402 0.0% 48/541 8.9% 116468483 73746072 +22126 chr4 + 190214555 150650736 150650735 150651201 466 TGCCATGAATGTCAGTACTACTT--ACCA-TGATGTTTTACTTCATTAGACAAAAAGACCAAAAAAAAA-AGTCTACTTCTATTTACAATAAATAAAACTAATCCATATTATAATCCTTCCACATGAATCATTAGAACTTGGGGAGAGAA-CTAAAGAGGAGAAACCATCATGTCTATTATTACTGTGACTAAATGGGATTAACTAATCCTCATGAGGTAAAGTTATGAATTAAGTGGTGCTCAGAACACTAAGAAAATTTGTGGGGAGAGAA-TGCAAATAGCTCCCTAATTATCTACAGCCTATTAACAAGCAAACCTTATTACTTGCAATTAAAATCCTCTTAAATTTTATGGCAAAAGTTCATTGAAACGTTGAAAATTATATGCTAATTATTATACTGTAAAGCACATGTTTAGTGTATACTTTTACTATGGGCTCAATAAATAATAAAATATCAAATTCAAGGTGA chr4 + 94230402 34179318 34179317 34179782 34179318 34179317 34179782 465 TACCATCAATGTTACTACTGTTTTGACAAATGACAGTCTGCTCTACCCTATTAGAAGTCAGAGAGAAAATATTGTACATCCAATATCTGTAAATACGACTAATAAAAGCTATAACCCTTTCA---AAATCATTAGAA--TGGAAAGAAAATCTAAAGAAAAAGAATGGCTAC--CTATTACTACTGTGACTAAATAGGATTATCCAATCCTCTTGAGAAAAAGTTATGTATTAAGTGAGAATCTAAATACTAAGAGAATTTGTGGGAAGAGAAATGCAAATGGTTTCCTAATTATCTACAGCCTATTAACATGCAATCCTGATTACTAGCAATTAAAATCTCCTTAAATTTTATGACAAAAGTTCATTGAAACGTTGAGAATTATATGCTAATTATTGCACTGTAATGCACACGCTTAGTGTGTATTCTGACTACAGACACGATAAATAACTGAATATTGTACACAATGTAA .:....x.....:.x....::..--..x.-...::x.:.:..::.::xx.:x.:...x.x:.:.:....-.x.x...x..:.x.xx.x:......x:......xx.x::.....:....:..---:...........--...::...:..-.......::.::..:x:::.:--......:..............:......x.:.......x....:x.........x........:x:x..x:..:.......:..........:......-.......:.:.:.........................x....x...x......x............::.............:......................:..................::.......x.....:.:.......:..:.:.x....::.:.x.:........:x:.....::x.:x...x..:. 23M2I4M1I39M1I52M3D12M2D11M1I21M2D99M1I198M 349/459 76.0% 465/94230402 0.0% 13/459 2.8% 116471418 73743137 +30420 chr4 + 190214555 150657830 150657829 150658291 462 ATATAAGATTTAACAGTTTGCTTTTTTTAAGTTATTTTCTTAATAATTTT-AAGGTGCTTAGTTCTTACATTTAATGTTTTATGTGCCATTATTTTGCTTTTACTGCAAAAGAAAGATCTGGCTCCCAAAGATAAAGGAGATTTTTGGTAAATGGTGAAGGTAAAGAAATAAATGACCCACTTGCCTAGTGTGTAATTACACTGCCTGAGATTGTAACAATCTATCACATGAAGGAGGATGACACCACGCTAAGGGGTGAGTCAAAGGAGATAGCCTTTGACTAACTACGGGACCCTGACGATCGATACTCCACAGATATTGTGCTCTC--AAAAACAATTGAATTCT--AAAAAAGTTTGAAAATAGATTCCCCCCCTTCTTTT-GATACTGATCAGAGACCTATCTTGACCTTATTCTGGAAGAGTAATACTTTCTTAAAAAGGTATATGAAATACATAAATCGTT chr4 + 94230402 34182726 34182725 34183188 34182726 34182725 34183188 463 ATAAAAGGTAAAACAGTTT-----TTTGAAGTTAGTCTTATAGTTATTTTTCAAGCCCTTAGTTTGAGACTCTAATGTTTTATGTGCCGTTATTTTGCTTTTACTGCAAAAGGAAGAGCTGGCTTCCAAAGATAAAGGAGATTTTTGGTAAATGGTGAAGGTACAAAAATAAATGACCCACTTGGCTAGTGTGTAATTACACTGGCTGAGATTGTAACAATCTATCACATGAAGGAGGATGACACCACGCTAAGGGGTTAGTCAAAGGAGATAGCCTTTGACTAACTACTGGACACAGACGATCGATACTCTGCAGATATTGTTCTCTCAAAAAAACAATTGAGCTCTAAAAAAAAGTTTGAAAATGGATTCCCCCTTTCCTCCCAGATACCGATCAGAGACTTGTCTTGACCTCACACTGAAAAGGCAATGCTTTCTTAAACAGGTATATGGAACAAAGAAATCCTT ...x...:.xx........-----...x......x.:.:x..:.x.....-x.:.:x.......:xx:xx.:................:.......................:....x......:......................................x.:..................x...................x.....................................................x..............................x....x.x..............::..........x.....--............::...--................:.........::.:..:::-.....:..........:.:.........:.:x...:..::.:...:..........x.........:..:.x.x.....x.. 19M5D26M1I278M2I17M2I35M1I82M 394/457 86.2% 463/94230402 0.0% 11/457 2.4% 116475104 73739451 +4416 chr4 + 190214555 150658525 150658524 150658758 234 CTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT-----CTCCCTCTCCCTCTCCCTCTCCCT-----CTCC--CTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTGCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT chr4 + 94230402 31839153 31839152 31839397 31839153 31839152 31839397 245 CTTCCTCTTCTTCTCA-TCTACTACTCTGCCTGCTTCTTCCTGGAAACTACTACTCTGCCTGTCTCTTCCTGGAAACTCCTACACTGCCTGGCTCTTGCGATCTACTACTCTCTCTGCCTCCTTTTCGGAATCCACTGCGCTGCCTGCCTCCTTTTCGCACTATACTGTGCTGTCTGCCTCTTTCTTGGACTCTTCTATGCTGCCTGCCTCTCTTTCTGCATCTACTACTCCACCTGCCTCTTCCT ..:.....:.:....x-...x.:x...:x:..x.:...:...-----..x.:x...:x:..x:....:...-----....--.x..x...xx.:..:x.xx...x.:x...:.........::::..xxxx..:x.:x.x.:x:..x....::::..x.x..x.x.:x:x.:x...x.....::..:xxx....:.:x:x.:x:..x......::...x.x...x.:x....x:..x.....:... 16M1D25M5I24M5I4M2I164M 140/233 60.1% 245/94230402 0.0% 13/233 5.6% 118819372 71395183 +4604 chr4 + 190214555 150658525 150658524 150658758 234 CTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT-----CTCCCTCTCCCTCTCCCTCTCCCT-----CTCC--CTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTGCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT chr4 + 94230402 31764929 31764928 31765173 31764929 31764928 31765173 245 CTTCCTCTTCTTCTCA-TCTACTACGCTGCCTGCCTCTTCCTGGAAACTACTACTCTGCCTGCCTCTTCCTGGAAACTCCTACACTGCCTGGCTCTTGCGATCTACTACTCTCTCTGCCTCTTTTTCGGAATCCACTGCGCTGCCTGCCTCCTTTTCGCACTATACTGTGCTGTCTGCCTCTTTCTCGGACTCTTCTATGCTGCCTGCCTCTCTTTCTGCATCTACTACTCCACCCGCCTCTTCCT ..:.....:.:....x-...x.:x.x.:x:..x.....:...-----..x.:x...:x:..x.....:...-----....--.x..x...xx.:..:x.xx...x.:x...:..........:::..xxxx..:x.:x.x.:x:..x....::::..x.x..x.x.:x:x.:x...x.....::...xxx....:.:x:x.:x:..x......::...x.x...x.:x....x:.:x.....:... 16M1D25M5I24M5I4M2I164M 142/233 60.9% 245/94230402 0.0% 13/233 5.6% 118893596 71320959 +3002 chr4 + 190214555 150658706 150658705 150658788 83 TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCACGGTCTCCCTC chr4 + 94230402 11115186 11115185 11115268 11115186 11115185 11115268 83 TCCCCATGGCTCTCCCCTGCCCAAACCTTCTCCTGCTCCCTCTCCCTTTGCACTCCTCTGTTTCTCCTCCCCAGTTCTCTCCC ....:x.xx.......::x...xxx..:.....:x............:.x.x:::.:..x.::...::...xx.x....:.:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 139543520 50671035 +3084 chr4 + 190214555 150678113 150678112 150678169 57 CACCTGTAATCCCAGCTACTTCAAAGGCTGAGACAGGATAACTGCTTGAACCCAGGA chr4 + 94230402 76033207 76033206 76033263 76033207 76033206 76033263 57 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...x....:.:..........x..........x.xx.xx..x::...........:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 74644906 NA +149455 chr4 + 190214555 150678649 150678648 150681384 2736 CAAGGAGGGGATACATGGGGAAAATGTTACCTTTATTAAGCCATCTTACAATGTTATTGTCAGGAATGGCTATAAAGAATTTCT-AGCATCGTCAAAGTCCCAGAGAGAGCAATGAGTGGTGCCT-GCACTGATGTCAAGTACTAGCTCCTAGGCATGGCTTAGGAATAAAAATAAACGCATTAGAAAGAATAAGAATGGGTGTATA-----TTGCACTTATGAGTACCCATTTGCTTGATTATCCACATAGCGTAACGGAATCAAATG-------------------CCTAAGATGA-ACTCTTAGTAA--GTAAGGTATATTAGCATTTTAGTATACTAATTTCACTACAAATTCATTGATATTACTTATTTAGTAAAAAAAAAATTAGAGGTAAAGGATTTTTTTAAAGATAGGACATGATATACTTCTTTTGGAAAAGAAAATACGTCAAGATGAGT-TCAATATTGAATTTCACCAATGAGTATATATTAAAACATCAGAAATTATTTTCAAA-ACAATCTTTCCTTAGGCTTAAAAGGAGAACCTGATTTAAAATCAACACCACC-CTA-----GCCATAGCTTT-----TAACGGGTCAAGTACATTAGCTACTCCTTTCTGCAAACAATGGTA---CATAAAAACAAAGTGGGATATTTCCTACAAAGAAGATTAAAAATTC---TTTAGGCCTGCCTTTCCTTGGACTCTGGATTTTAAAATGACATACTACAAGATAAAATAGTAATGCTAATATTGATAGTTTGTCCATTACAGGTCAGCTAACTGTCCACTGGAACAGTTACAAAGCTGTTAGTTTCGATTTCACAAGGCCAATCAATACAGAGGCATACTGTTTCAATTTTGTCTGCATTGATTTTTTTTTATAACACTCCAACCTTACAGCATTCATCTTTCTGAAAGAAGGAAGATTTGATTTACTGAAGAAAAATTGGAGAGAGCATCACAAAGATTTTACCGGCAAGCCTGTGACACAG-AAAAAAGATGAATGTCTTTCAGGAAGAGACGCCTCTAGCTTGAGGGCATCCATTAGAACACACTCAAGCAATCTGAAAAGGAGTTTCTTAAAGCAGCAGAAATCTAAACCTAAA--CAGTCTCCTAAACTAATCAAAAGCATTCAAGAATTTTGATAT---GAGGTTCCGTTAAAAATTCCTAAACCTTATTACTTCTAAAATAATTTATGTCTCTAGCTCTACCTATGCATTTTTTAGAGATGAGAACCACCTCTTTCCCAGACTAATACCAAGAGTGAATTTCCATGGTACATTAGTCAGCCTATTAGAATGCAATGAAGGACGATATGAGAAAAGGGTAGTATGTCCTCTGAGACTTCCATCCAGTATTCTCCATCATCTCTCCTCATCCTTCTTACATTCAGCCACTTTACCAGGTGTCATCTACATGAAAGATGATTTGTCTCCTGACCCAAATAAACACAATGCCTGCTCCATGCACCGGAAAAAAATTACTTCTGCCACTCTGTTCATTTGTGGCTTCTTTCTTGCTTATTCCACTATTCTTATCAAGCTCTCTCAGTTTTCACCTGAGCCTCACTCCAGGTGACAGTAATGTATGGATGAACAGGTACTTGTCTGTCCCATTATTTCCTGAAATCTCTAAGCATTTG-------AAAAAATGCAATGACAGTAAAGGGC--ACAGTTATCAGAGCTCCAAGGGAGGAATACTTTCCTTTACTTACCAATGCAATAGTCTAGGCATCAAAGAAAAAAGAGAGAGAGAGAAAGAACTCTC----ATGGCAAAAGCTGGTGTAAGCGAGATATTAAGACACAAATTGCATTCAGGCAGGTCACTAGGTGTCAAAAGATATTAGATGCCTGCTGTGAGGAAACAACAATTCCCATCTGCCTCTGAGAAAATAATATTTTCATTTTCAGTTTTTATTGAATGGAAACTTTTGGGAATATGTCTTTATAAAGGGTATTAAGTCTACCAACTATAACATGTTCAAAATGGCTATAATCATCATTGTGTTATCCATAAAGCAGCAGATTTCATTTGGTCTCTTTAGATGGGATAAATTGGATTC-TTTTTTCCCCGGCTTGCAGTTTTGTCGCAGGACCAGATGTTTCTCAAATGCCACATGCTGAGGCTCCTATACTGAATGTAGCACCTGACCTTCTCTATAATTGACTAAAAATATTGATGTAATGGCATGGGTCTGATTGTGATTTATTAAAACCACTGCCGATCCCAGGCCAGCTGCCAGCATTGCAGCCCACTGATCGTGTGGCATTAGAAAAGCCATCAATAGTGAAACAAAATAAATGACATTAATGGGAAAGTATCAGGCCTACATAACCATGGCTACAAGCAAATTACGTGGATTCCAAAGGAGGGTCAAAATAAAAAAAATGCCACAAATGAAATTTCTAAATATTCTAATATGATTGAGTTAAAAGACAAAATGCTACTATAATTCTTT------AGATAAAATGCA---AAGAAATTATACTTAATTTAATCCTC--------TTCACTAGAATTTTGCTCATTGTGCATATTT-CTTTTAGCAGGCTTAGCATAGTTAAATGCATTACAGCT-----ACAGTATGACTCTGATTTCTCTCTAATGCCATTTATGTTTTCTAGAATTATGCTAAGTGAAGAACAAAGTACACTGTGT--TATTCCCAT--------------TTATTACA-----------ACCATGTCCA----------------TAATTTACAAGCTGATTATGCAAGCCTCATACAAGGGAAATCAGAGAATAGTTA----ACCACTGTCAAAGTATGGTGAGCCAGCATACATTTTTGTCAGCTACATT chr4 + 94230402 34192152 34192151 34194957 34192152 34192151 34194957 2806 CAAGGACAACACAAATAGGAACATGCTAAGGTTTATTAAGTCATCTCGCTATGTTATTGTCAATTCTGGCTATGAAGAATTTCTTAGCATCACTAAAGCTCCACGGAGAGCAATGAATGTTGTTTTACGCTGTTGTCAAATGCAAAATCCCCCGGGTGTGTTACGAGTCAGAATAAAAGCATGTGAAGAAGTTAAGACTGATGAAAAATTATTTATCTTCATCAGGTCACATTTACTC---TCAGGACACAGAATTTTAAAATTCAATGTACCAGCCAGTGCTTATGTCACAAGATAATGCTCTGAAACACTGTTGAGCATATTCAAAATCT-GTATTTTA--TTTAAAGCAAATCTAACACTAGAATTTGTTTCAGGATAGAAA---TAGAGAGAAAACATTCC---------AGGACATCTCACCTGAATTTTGATGCAATTAAAACCTCAGGAAAACTATGAGCAACAGATACTAGCACTG----CTTCTTCAAATATCAACCATTATTTTAAAGTGCATTTGATAGCTAATTTTAAGAG----AGCAGGTAAAAAGTTATTGCTGCCACTGAAAGTGACACACATTTGAGAACAACAGA--GAATACGTTAGTAACCGTTATCTACACGCAACTGCAGGGAATGAGAATAAAATAA------CCTTATAAGTAACATTAAAAATTCAGTTCGACCCCTCTCTTTCCATGGACTTTGGATTCTAAAATGACATACTACAAGATAAAATAGTAATGCTAATATTGATAGTTTGTCCATTACAGGTCAGCTAACTGTCCACTGGAACAGTTACAAAGCTGTTAGTTTCGATTTCACAAGGCCAATCAATACAGAGGCATACTGTTTCAATTTTGTCTGCATTGATTTTTTTTTATAACACTCCAACCTTACAGCATTCATCTTTCTGAAAGAAGGAAGATTTGATTTACTGAAGAAAAATTGGAGAGAGCATCACAAAGATTTTACCGGCAAGCCTGTGACACAGGAAAAAAGATGAATGTCTCTGAGGCAGAGACGCCTCTTGCTCGAGGGCATCCATTAGAACACATTCAACCAATCTGAAAC--AGTTTCTTAA-GCAACCGAAACCTGAGCCTAAAGTCGGTCCCCTAAACTAATCAAAAGCATTCAGGAATCCTGATATACAGAGGTTCTCTTAAAAATTCCTAAACCTTATTGCTTCTAAAATAATTTATGTCTGCAGTTCTACCTATGCATTTTTCTGCAAAGAGTACCACC-CTTTTCCTCTCTAATACCAAGAGTGAATTTCCATGGTACATTAGTCAGCCTATTAGAATGCAATGAAGGACGATATGAGAAAAGGGTAGTATGTCCTCTGAGACTTCCATCCAGTGTTCTCCATCATCTCTCCTCATCCTTCTTACATTCAGCCACTTTACCAGGTGTCATCTACATGAAAGATGATTTGTCTCCTGACCCAAATAAACACAATGCCTGCTCTATGCACCAGAAAAAAATTACTTCTGCCACTCTGTTCATTTGTGGCCTCTTTCTTGCTTATTCCACCATCCTTATCAGGCTCTCTCAGTTTTCACCTGAGCCTCACTCCAGGTGACAGTAATGTATGGATGAACAGGTACGTATCTGTCCCATTATTTCCTGAAATCTCTAAGCATTTGAAAAAAAAAAAAATGCAATGACAGTAAAGGGCATACAGATATCAGAGCCCTGAGAAAGGAATACTTT-CTTTGCTTGCCAAGGCAATAG-CTAGGACTCCAAG-TAGAGGCAAAAGCTTGCTTGCTCTCTCTCCTGTGGCAAAAGCCGGTGTAAGCTGGATATTAAGACACAAATTGCATTCAGGCAGGTCACTAGGTGTCAAAAGATATTAGATGCCTGCTGTGAGGAAACAACAATTCCCATCTGCTTCTGAGAAAATAATATTTTCATTTTCAGTTTTTATTGAATGGAAACTTTGGGGAATATGTCTATATAAAGGGTATTAAGTCTAGCAAGTATAACATGTTCAAAATGGCTATAATCATCATTGTGTTATCCATAAAGCAGCAGATTTCATTTGGTCTCCTTAGATAGGATAAATTGGATTCTTTTTTTCCCCGGCTTGCAGTTTTGTTGCAGTACCAGATGTTTCTCAAATGCCACATGCTGGGGCTCCTATACTGAATGTAGCACCTGACCTTCTCTATAATTGACTAAAAATATTGATGTAATGGCATGGGTCTGATTGTGATTTATTAAAACCACTGCCGATCCCAGGCCAGCTGCCAGCACTGCAGCCCACTGATCGTATGGCATTAGAAAAGCCATCAATATTGAAACAAAATAAATGACATTAATGGGAAAGTATTAGGCCTTCAGAGCCATAGCTACAAGC-AATTATATGGATTCCAAAGGAGGAGGAAA--AACAAAAATGCCACAAA--------CCAAATACGAGAAAATATTAAATTTACATGAGAAAA-ACTAATATAATATTTGGAACCAAAATAAAACATATGCCAGAAAACA---TTAATTTAACCCCCTAAAATATTTCATTAAAATTACAATCATTGCATACATTTATTTTTGATGTGTTTATAGTGACTAAATGCATTCTGCCTTTCCCATAAAGCGATTTTGTTTTGTCTCTAATGCCATTTTAGTTTCCTAGAATTATGTTAAGTGTATTGCAAAGTGCATTATGCGGTAGCTCTATTTTGCTGTAAATCATTATTATAAAATAGAAATTATCATGTCCATATTTTGTGTACTTGGTAATTTTCAAGCTGATTACATAAACCTTATTTGAGGATTATCAGAAAACAGTTACTCTGCTACTTTC-AAGCATG--------GAATA---TTCTATCAGTTACACT ......x::x.:.x..:..:.x.xxx.x.xx.........:.....::.x............:xxx.......:..........-......:::....::...x:...........:..x..::.-:.:...x......:.:.x.:x...:xx.x:..xx...x..:.x.:......x....xx...::.:.x.::.:x.:..x.x.-----..::x:.:..x..xx.x.....:..:---.xxxx...:..x:.xx:::...:x....-------------------.x:.....:.-:....x.:xx.--..x::.:.....x:x.x.:.-....x:..--..:.xx:.....::.x::x..xx.:..:...x:x:.x.:...---.....:x...:x...::---------.......xx:.:x:xxx.....:x:x.:xx..x..x...:..x:.x.-.x.::.x:::..x::.x..x..----:x.x..x...:....:xx........x..:-:..x.:xx.xx:..:x:....:..----.x.x.:.xx...:.:.x::.::..-..:-----.x..:.xx...-----:...:.:--:.:...:....:x..:x:.x...:..x:...:x.:.---x..:.:..:...:.::------:.:..:..:x..x...........---.:x.xx...x:......x......:......:.........................................................................................................................................................................................................................................................................................-.................:.x...x............x...:.....................:....x..........x--..........-...:.x....:..:.:......--.:...:.......................:....::......---.......:x......................:.....................x:..:.................:x.x:.x...x......-....:..xxx.........................................................................................................:..........................................................................................................:.......:.....................................:...................:..:.......:..............................................................x.:....................................-------.........................--....x.........:.::..::...........-....:...:....x.......-.....xx..x...-x.:.:.x:.:..xxx.xxx.xx.....----:..........:.........x:..........................................................................................:.................................................x............x....................x...x.....................................................................:......:...............-.........................:....x.............................:.........................................................................................................................:.................:.......................x..................................:......x..x.:....:.........-.....::................:xx...--..x..............--------.:.....:xxx..x..:x.x:.x...x.x..x....-:...x......x:..x------.:......:::.---x.....x:.---.........:..:.--------....:..:....x::x......:::.:....-:....::::x.:...xx:.:::..........x::x..-----.:.:x::..:.:..x...x...............xx....:...........:......x.xx:......:..:.:..:--..x::.:..--------------......:.-----------.:........----------------......x...........:::..:...:..x::...:xx......:..:.....----:.:...x..-...:...--------.x...---..:.:....:....:. 84M1I40M1I81M5I26M3D28M19I10M1I11M2I20M1D8M2D42M3D17M9D47M1I22M4D30M1I24M4D24M1I3M5I11M5I7M2D36M3I16M6D24M3I313M1I79M2D10M1D22M2I42M3I92M1D401M7I25M2I33M1D21M1D13M1D27M4I294M1I286M1D29M2D17M8D36M1D16M6I12M3I9M3D14M8I31M1I38M5I79M2I9M14I8M11I10M16I54M4I9M1D7M8D5M3D16M 2215/2668 83.0% 2806/94230402 0.0% 206/2668 7.7% 116486497 73728058 +12925 chr4 + 190214555 150683535 150683534 150683743 209 AAAGGTATCCCTTTACCTCACTGCAGAATTTCCCCAGGCTCCATGCTTGTCTGTGAGAATGTTGATAATTTTCTGGATTAGTTGAGTTGCTGTCACGTGGTCACGATATTTTGCTGCTCTTATCAAATGATCACACATCTTCTCATCTTCTCGTTTGTCTGCAGAATACTGGGCACACAGTGACTTGGAGAGAAAAAAAAATAATACTA chr4 + 94230402 34196238 34196237 34196446 34196238 34196237 34196446 209 AAAGGAAATTATTTACCTTGGCGCAGAGCTTCCCCAGGCTCCATGCTTGTCTGTAAGAATGTTGACAATTTTCTGTATTAGCTGAGTTGCAGTCACTTGGTCTCGGTACTTAGCTGCCGTTATCAAATGATGGCACATTTTTTCTTCTTCCCGTTTGTCAGCAGAGTACTGGGCACATAGTGACTAAAAAGAAAAGAAAGACTTTACTA .....x.x::x.......::x:.....::.........................:..........:.........x.....:........x.....x.....x..:..:..x.....:x............x:.....:..:..x.....:........x.....:...........:.......x::.:::...:...:.:xx..... 209M 166/209 79.4% 209/94230402 0.0% 0/209 0.0% 116487297 73727258 +3279 chr4 + 190214555 150685376 150685375 150685458 83 ATAAGGAATCAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGT chr4 + 94230402 9354658 9354657 9354740 9354658 9354657 9354740 83 ATGAGGAAACAAATACATTTCTGTAGGTATTTTTTTCAATTCAGATGTTTTTTTTTTGTTGTTGTTGTTTTTTTTAAGGTAGT ..:.....x......:..x.x.:..x:...x.x.x.xx..x:.x..x..........x..x..x..x........:..::... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 141330718 48883837 +3124 chr4 + 190214555 150685381 150685380 150685438 58 GAATCAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792610 24792609 24792664 24792610 24792609 24792664 55 GAATTACTTATGTA---AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ....:.xx...:..---.x...................x:........x......... 14M3D41M 47/55 85.5% 55/94230402 0.0% 3/55 5.5% 125892771 64321784 +3234 chr4 + 190214555 150685384 150685383 150685466 83 TCAAATATATATATATATATATATATATATATATAT------ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGTCTTGCTCT chr4 + 94230402 7823263 7823262 7823351 7823263 7823262 7823351 89 TTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCTTATTCT .:.x...:.........:.:......x.:.:x.x..------...:...x..:..............x:...x:..xxxx....::... 36M6I47M 60/83 72.3% 89/94230402 0.0% 6/83 7.2% 142862121 47352434 +3145 chr4 + 190214555 150685389 150685388 150685447 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 117434386 72780169 +22419 chr4 + 190214555 150686850 150686849 150687215 366 TATTTTGTAAACATTTGATAAGCTATTA-----AAGTTTGTTCTAAAAGGCATAATTCTAAAAACAAGGGCTCAAGGTAAGCTAAACGGTAAAATGGTTTAAAGTGTTCTTTAATGGATCCTTCTTTACAATTTGAACAGCAACTTTTCATATCTGACATAAAATCTATAGATATAAATCACATTAAAGGGCTATTCTTTCCTGATTATCAATCTCTGTCTCTTTGTGGAACCTTAGGGTCACATCTGACCTAAAAACATGATAAAA-GAAAACCAAACAAGAATGTTTCAT-AAAGATATAATGAACTTGTAATATTTTTT-----AAATGTCCTTATAATGTAAT-TTGAAGATGTTCTTATTTAAAAACCAATAAT chr4 + 94230402 34198144 34198143 34198522 34198144 34198143 34198522 379 TACTTTGTAAATGTTTCATAAGCTGTTATTTTTAAAGTTGCTTGAAAGGGTAGAATTCTAAAAACAAGTGTACAAGGTAAGCTAAGTAGTAAAATGTTTTAAAGTGCTCTTTAATGGATCCTCCTTTACAATTTGAACAGCAACTTTTCATATCTGACATAAAATCCATAGATATAAATCACATTAGAGGGTTATTCTTTCCCCATTATCAATCTCTGTCTCTTTATGGAACATTAAAGTCACATTTGACCTTAAAACATGATAAAATGGAAATCAAACTAGAATGTTTTGTAAAAGATATAATGAACTTGTACCTCTTTATTAAAAAAGTCTCTTTACGATGTGATCTTGAACGCATTGCTCATTAAACACCAAAGAT ..:........::...x.......:...-----..:x...:.:x...:..:.x...............x.:x.............:::........x.........:...............:...........................................:...................:....:..........:x.....................:......x...::.......:......x..............-.:...:.....x.........::.-....................x:x:...x.-----..:.x..:...::....:..-.....x:::..x:.xx.....x.....x:.. 28M5I234M1I24M1I29M5I20M1I31M 306/366 83.6% 379/94230402 0.0% 13/366 3.6% 116488706 73725849 +3096 chr4 + 190214555 150693424 150693423 150693493 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 74660227 NA +23335 chr4 + 190214555 150694315 150694314 150694833 519 AAAATCACTTACACTATAAATTA----CTTGTCTC-ACTGAAAACAATTTAAAAGTGAAATCACTTCAGGGACAATAAATGAAGAAGTTTCTCAGTATTTCACTTTTGGAGGTCTTTGTACTTGATCCCTTACCT------TAAAGTGTGATCTTTAACAAAAAAAAAAAAAAGCTATCTACAGAAA-CTCAGAAAGACTCATAGAAAAGAC--AGAAAAATGAAAGCTTAGAAAATCTCAACAGCAAACAAAAGTCAACCAATGACAATGTGTGACAGCCACCTTTAATTCTGTAGTGATTCCTCTGTCATGCAACGACTCAAAGTATTGATTTCTCTCAGCATG-AAAAAGCCTAAGCCAATGAAACAGACAGAGCAGCAACCCCCTCCTCCCTTCCCCCCATAACAGCATTCAAGGTTAAAACAGGCAGAACACTTATCAAAGTATCTCTTCCATTTCTTCTTGTTTTAATAGACTGGATACAACATGTTGGGTTCTTATCGTTACAAA-CTATAGTCCT-CAGACAATATTT chr4 + 94230402 34201791 34201790 34202292 34201791 34201790 34202292 502 AAAATCATCCACAAGATAACACATAATCTTGCCACTAATGCAAATTCCCTACAAATAAGGATATTTTAG------TAAATGAAGGAGCTCCTCAATCCTCTGCTTTCAAAGATCTTTGCACTTGACCTCTGACCTGAAGTTTAAAGTCTGGACT-------------AAAAATGCTACCCTGGGAAATCTTACAAAGACTCCTGAATAAGACTTAGAAAAATGAAAGCTTA--AAACCTCAACAGCGAACAAAAGTCAACCAATGACAACGTCTGACAGCCACCGTCAATTCTGAAGTGATGCCTCTGTCATCCAACGACTCAAAGTATTGATTTCTCTCAGCATGAAAAAAGCTTAAGCCAATGAAATAGATATAGCATCA-------------TCCCCCCGATAATAGCCATCAAGGTTAACACCAGCAGAACACTTATCAAAGTATCTCTTCTATTTCTTCTTGTTTTAATGGACTGAACACAATGCAATGGCTTCTCATCTCAGCAAACCTATAGTTTTCCAAACCTTATTT .......:::...xx....xx:.----....:.x.-.x..x...:xx::..x..:.:.::x:.:..:..------.........:..:.:....:.x:.:::....:::..:......:......:.:..x....------......x..:x..-------------.....x....:.:xx:....-..:.x........x.::.x.....--.................--...:.........:......................:..x...........x.:.......x......x..........x.................................-.......:.............:...:.x....x..-------------.:.....x....:...xx..........x..x:...........................:..................:.....:.:....::::x...x....:...x:x:....-.......::.-..:..xx..... 23M4I8M1I33M6D60M6I13M13D20M1I24M2I17M2D113M1I35M13D117M1I10M1I12M 385/485 79.4% 502/94230402 0.0% 51/485 10.5% 116492524 73722031 +3218 chr4 + 190214555 150696090 150696089 150696162 73 CATGGTGGCATGCACCTGTAGTCCTAGCTACTTGGGAGGATGAGGCGGGAGGATTGCTTGAGCCCAGGAGGTT chr4 + 94230402 76033197 76033196 76033267 76033197 76033196 76033267 71 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT ..::....--.....x......:.:.........::...x....x.xx.x.:.x::.....:.....:..x.. 8M2D63M 52/71 73.2% 71/94230402 0.0% 2/71 2.8% 74662893 NA +3250 chr4 + 190214555 150697327 150697326 150697469 143 AAAAAAAAAAAAAAAAAAAAAAAAACAGGGAGAGTTTCACAGAGGAATTAAAGGCTAAGTACCTGTTCACCAAGAAGAAAGGG---ATAGAAAAAATAAAATGTAGAAAAT---AAAAGAGGTCAAAAACTAAGAGAACAAGCTCAAAT chr4 + 94230402 54674453 54674452 54674598 54674453 54674452 54674598 146 AACAACAACAAAAAAAAAAAAAACACAGAAGATTTTTGATGTAGATCTTAAATGCCAAGCAATTTTTAACCAGGAAAAAATGAGTTACAGGTAACACAGATTTTAAATACTTTGAAAATAGGTAGGAAA--AGGAGAGC-TGCTCAAGT ..x..x..x..............x....::::xx...x.::x..:xx.....x..:...:.x:.x..x....:...:...x.:---.:..:x..x.:.:.x.x..:.x.x.---....x....x::...--.:....:.-x......:. 83M3I25M3I15M2D8M1D9M 93/140 66.4% 146/94230402 0.0% 9/140 6.4% 96022874 94191681 +31843 chr4 + 190214555 150708019 150708018 150708527 509 TTAACAATAAGCAGCCTATTTCATACTTAATGAGGGCCTGCAACTGATAGTTCATAATATTCTGGAAACAGGTATCAAGGCAAATCTCACAA-GTAACA--GGCGCATCATCTAAGGATCTTTTTCACATTAAGAATCCTATTAGAAAGAAAACACTAAAAGGTAATTGAATTTCCCTCAGTTATCTTCATCTCTGTCAGCTCCTGCTACAATAACTTACTCTCCAGAGCAGAGATAACTCAATTCTGTTCAGCAAGCATATGTTATGAATCTCCAAAGCAAACTTGTCTAAATCATTCTGGTCTTCTATCAAGGTTGCCTGTGGATATGAACTCTGACAGAAAGCAAACAAATTTATTTTTATCTTTTCAATAATTCACTTCTTTATGCCTTGATAGAAGAAATCATGAG-ATAAATATATGGTCTACAGTTAT------GTTATAAAGTCGGGCTG-AAATGGTTTCCATG--ACTTAA-------ATAAAAGACTTAATGAATAATCCTTCTTAAACACAAAGAAA chr4 + 94230402 34209891 34209890 34210414 34209891 34209890 34210414 524 TTAGCAAGCAGATGCATATTTCATCCTTAATGAAGGCCTGAAAAGAAGACTTCACTTTATTCTGGATGCAGGTATCAAAGCAGATTTCACAAAGCAACACAGGCGCATCATCTAAGGATCTTTTTCACATTAAGAATCCTATTAGAAGGAAAACACTAAAAGGTAATTGAATTTCCCTCAGTTATCTTCATCTCTGTCAGCTCCTGCTACAATAACTTACTCTCCAGAGCAGAGATAACTCAATTCTGTCCAGCAAGCATATGTTATGAATCTCCAAAGCAAACTTGTCTAAATCATTCTGGTCCTCTATCAAGGTTGGCTGTGGATATGAACTCTGACAGAAAGCAAACAAATTTATTTTTATCTTTTCAATAATTCACTTCCCTGTGTCTCGATGGAAGAATCTAAAGGCACAAAT-----GCTCCCAGTAATTCCAGAATTATAAGGACTGGTTGAAAATATTTTATATGGAGCTTAATGCTATGATAAACTGTTTGATTCACCATTCTGTTTCAGCATAAACAAA ...:...xx..xx..x........x........:......x..xx:.x.x....:xx.........x:..........:...:..:......-.:....--..............................................:.....................................................................................................:......................................................:.............x................................................................::.:..:..:...:......x::.x::.-.:....-----.:::x....x..------:......:.x.x..:..-....:x...x:...--:.....-------.....xx::..:..xx.:x..:..x:..x.:..:...x... 92M1I6M2I310M1I6M5D12M6I17M1I14M2I6M7I41M 433/504 85.9% 524/94230402 0.0% 25/504 5.0% 116498128 73716427 +3465 chr4 + 190214555 150717529 150717528 150717602 74 GTGCACATGTAGTGCCAGCTACTCGGGAGGCTGAGGTGGGAAGATCACTTGAATCCAGGAAGCTCAGTTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:......x.........:.::........x:xx.x::.x........:....:.:x:.::.x:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 74684325 NA +13698 chr4 + 190214555 150718005 150718004 150718546 542 TTACAAAAATGA--TTGCCAGGAAACTTGTATATTCACACATGCACAATGTTTACAAGGTATGATGTTTCTGCATGACATA-ATTTTTTTCATAAATAT-----TCTGTTTATAACCATAAGATTAAGAAACAAAGTTAAGATGTACAGCTCATCAATGATGTCATGACATTCATGGAACCTCTCTGTAAACCAAAAGCATAAAATGTCAAGGATATCCCACTCCAATGATAAGCATGCAATGAACTAAATAGATGCACATTGCAGATCTAC---ACTGTCATCAATCCTCTGA--TAATAAATGAAACAAGTCAGCTACTTTACACAC----AAATCGTACATTAAATAGATGACAACATCTTTTTTTGCAGAAGAAGGTAATTAGCAGTAGATAAAATTCAGTTATATTATTTAAGAATGTACAGCTTGAATTCAAGGCTGAATACAGATAACCTCTAAGATATAAG--CTGTCTCAAAAAAAAAATGC-CTCATC-CTGCAGAGTATT-------------GTTTAAGAGCAATACAGTT--AGAACATG---AGCATA-------CTTCAACCAATTGAAGTTT chr4 + 94230402 34221865 34221864 34222427 34221865 34221864 34222427 563 TTATAATAATGAAGTTGCCACTGAGGTACTGTATTCATTCATAGTCTGTATTTACATGACAGAGT---CCTATATTCCACACGTTTCCGACATACACACACACCTCTGTTTATGGTTTGCATCTGAAGGAAAAAAGTGAG------CTGTTTATCA--------------TTCAGGGAGTTTCTGCCTAAATCCAGAGCAAAAGATGTGAAGCATGTCCAAGTCCAATGATTATTAGGGAATGAAGTAAAAAGATGTACTTTTCATCTCCACAGGACTGTCGCCAAACCCTTGATGTAATAAATGAAACATGCCTGCTATTTCAC-CACCGCAAAATGGTACTGTAGATATCTTACAACATCTCTGTTTGCAGGAGGGGGTAACTAGCTCTAGATGAAGTGCAGATATGTTATTAAACAACGCACAGCTTGAATCTGGGGGCCAACATAGATGACCTTTAGAACATAAGCACTGTCT-AAGACAAATATGCTTTCATCTTTGGGGAGTATTTTTTCAAGAAAAGATTTAAGAGGAAAACAGTTTAGGAATACGTTAAACATAAATGTGCCTTCAATCCCTTAATGCTT ...:..x.....--......xx:.:x.xx.:......:x...:xx.x:.:......x.::.x::.---:..::..xx..:.-:...::xx....x.:.:-----.........::::xxx.xx.x...:..x.....x.:------.x.:.:....--------------....x...:::...x:x....:.x.:....x..:....x...x..:...x.x.........x.x:.x.x......x....x.....:..x..x..xx..:..---......::...x..::...--..............x.:.x....:..:..-...----....x....xx..:...xx.x.........:.x.......:..::.....:....xx.....:..:.x...x...:.....x..x..:.:...........::::..x:x..:.:....:....:..::.:.....--......-..:.x...x....-:.....-:..x:.......-------------:........x..x......--:...:.:.---.:....-------......:.xx..:.x.:.. 12M2I51M3D13M1I17M5I36M6D10M14D102M3I19M2I29M1D3M4I136M2I6M1D13M1I6M1I12M13I19M2I8M3I6M7I19M 364/517 70.4% 563/94230402 0.0% 71/517 13.7% 116496140 73718415 +3169 chr4 + 190214555 150724860 150724859 150724920 61 ATTTAAATATATGTATATATATACATATATATATGTATATATATACACACACACACACACA chr4 + 94230402 23247714 23247713 23247774 23247714 23247713 23247774 61 ACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA .:..:.x:..:...:...::.:...:..x...:x::....:..:.....:........... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 127477146 62737409 +3396 chr4 + 190214555 150724870 150724869 150724922 53 ATGTATATATATACATATATATATGTATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ....:.:...::...:.:..x....x.:....:........:........... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 127477148 62737407 +3392 chr4 + 190214555 150724878 150724877 150725211 334 ATATACA-----TATATATATGTATATATATACACACACACACACACACATACATATAGCAGAAATTCTATAATTGAAAAATGCAATAACATGCTGAAGAATGCATCAGAGTCATCAGAGTCTCTTAATAGCAGAACTGATCAAGAAGGAAGTAGTGAGCTTGAAGACAGGCTATTTGAAAATACATAGAGGAGAGAAAAAGGAA------TAAGAAAAAATGAAGCATGCCTACAAAATCAGAAAACAG--CTTCAAAGGGGCAAATCTAAGAGTTAATAGCTTTAAAGAAGAGG------TAGATAAAAAGAGAGGGGTAGAAAGTCTATTCAAAAGAATAATCAGAGAAC chr4 + 94230402 74671060 74671059 74671353 74671060 74671059 74671353 294 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAA----AAAATTAAAA-----------ATGCAGAAGAAGGAAT--AAGTTAAATAAGTTACAACAAAGCAGAATTAA----------------------GATTTCAGGATATTTGAGGCT------------GAAATTGTAATGCTTGTGGGAAAATATACAGGATAC--ACAGGACCAAACAGAAGGATTTATGGAGGGCAA----AGGACATGAAAGTTTGGAAGATCAGGGTATCCTAGA-GGATACAAAGGGATGAAAAATAGA-TCAGAAAATAAACCAGAGAAC .......-----..xx.:...:..........:...............x.x.x.x.....x:...----.x....:...-----------....x......x.x..--:...:.xxx:...:x.xxx.x.......:.:.----------------------..xxx....x.......::x.------------....xx.x..------.::.....x..:x..x..:.--...::.:..:.x.:x..--:..xx:::......----.:..xx.:.x..:..x:....xx...------....-::.x.x.:....:.::...:.xx.-...:..:.xx..:........ 7M5I53M4D10M11D16M2D32M22D21M12D10M6I20M2D17M2I14M4D26M6I4M1D24M1D21M 189/275 68.7% 294/94230402 0.0% 78/275 28.4% 76053818 NA +3065 chr4 + 190214555 150730543 150730542 150730625 83 CATGATGGCACAGGCCTTTAATCCCAGCTACTTGGGTGGCTGAGCCATGAGAATCCCCTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...::..x.--.x..:.:...........::x.........x..x...x.x.:......x:.:..x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 74697346 NA +3923 chr4 + 190214555 150733508 150733507 150733592 85 AACTTTCCTGAAAGCCTCAAATTATTTCAAAACAAAAGACTGATTCTGTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248015 75248014 75248088 75248015 75248014 75248088 74 AACTCTC----AGGCACAAAATTATCACAAAATAAA-------TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ....:..----.:..x:x.......:x.....:...-------.:..x:...................x................ 7M4D25M7D42M 62/74 83.8% 74/94230402 0.0% 11/74 14.9% 75485493 NA +3467 chr4 + 190214555 150733556 150733555 150733594 39 TCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 75485506 NA +3102 chr4 + 190214555 150733557 150733556 150733592 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 138132253 52082302 +3353 chr4 + 190214555 150733557 150733556 150733596 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 75485508 NA +3139 chr4 + 190214555 150733559 150733558 150733598 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 75485510 NA +3316 chr4 + 190214555 150733559 150733558 150733594 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 138132255 52082300 +3102 chr4 + 190214555 150733561 150733560 150733596 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 138132257 52082298 +7811 chr4 + 190214555 150735253 150735252 150735384 132 CCTACCTCAAATTCCGCATGTCTGTGAATATCTTCTGCTCTCTGCCTGCTCAGGATAAATTCAGCTTCATTTGCTACTCTTACTAGATGATCCTTCATTGTCTGGCTAAGCAACCTGTAAGAAATGAATGTT chr4 + 94230402 34223409 34223408 34223540 34223409 34223408 34223540 132 CTTACCTCAAATTCAGCATGTCGGTTAATATCTTCTGCCCGTTGTCTGCTCAAGATAAATTCTGCTTCATTAGCCACTCTGACCAAATGGTCCTTCATATTCTGACTCAACAACCTGTGGACAGAAAATATT .:............x.......x..x............:.x:..:.......:.........x........x..:.....x..:.:...:........xx....:..x.:........:::x.:x:...:.. 132M 103/132 78.0% 132/94230402 0.0% 0/132 0.0% 116511844 73702711 +3756 chr4 + 190214555 150737456 150737455 150737628 173 ACAGAACGAATGAACAAACGAATGAACGAAC-GAAGGAAA------AAGAGAGAGAGAGAAAGGAAAGAAA-AGAAAAAAGAAAAGAAAAGAAAGACGAAAGAAAGAGAGAGAGAAAGAAAAGCATT--CTATCCTC-AGTAAGTATCCTTCAATAATGAGATTTAAAGGGTCAAGAGTATACC chr4 + 94230402 57629670 57629669 57629846 57629670 57629669 57629846 177 ACAGCAAGAAT-----AGTGGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGAGTTTGCTATCTGCTGGTAAATGAAAATAAACA--GAAAATTACACTGTCAGATGTATACC ....x.x....-----.::.:...::..:..-........------...x:xx......x..:xx..x.xx-.x..........x......:....x.....::.:........:..:...:.x:..--.....:x.-:....:.:xxxx.x..:.--..:.x...x.xx....::x....... 11M5D15M1I8M6I25M1I55M2I8M1I18M2D26M 116/166 69.9% 177/94230402 0.0% 18/166 10.8% 93107786 NA +3044 chr4 + 190214555 150737479 150737478 150737541 63 GAACGAACGAAGGAAAAAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAAAGAAAAGAAAAGAAA chr4 + 94230402 92134785 92134784 92134847 92134785 92134784 92134847 63 GAATGACTAATGGGGAAAGATCTGCCGAGAAGGGAGAGAAAAAAAAAAAGAAAAAAAAAGAGA ...:..x::.x..::.....xxx:xx.....:...:......:...........:......:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 58602694 NA +3014 chr4 + 190214555 150737492 150737491 150737551 60 AAAAAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGACGAAAGAA chr4 + 94230402 92660657 92660656 92660716 92660657 92660656 92660716 60 AAAATGAGAGAAAGAAAAAGAAAAGCCAACAAAAAAGAAAAGCGAGCAAAGCCAGAACAA ....x......:...:....:....xx..x............x:.:x....x.::..x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 58076835 NA +3092 chr4 + 190214555 150737508 150737507 150737576 69 AAAGGAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGACGAAAGAAAGAGAGAGAGAAAGAAAAGCATTCT chr4 + 94230402 76841607 76841606 76841675 76841607 76841606 76841675 69 AGAGAATACATGAGGAAGATAAGAAGGGAAAAAAGAGGAGAGAAAGAGAGAGAGATTGAAAGGGATTTT .:..:.x.x.x:..:..:.x:.:...::..:.....x..:...............xx....:.x...:. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 73895901 NA +3104 chr4 + 190214555 150749737 150749736 150749794 58 GACGCTGCCTGTCTCAAAAACAAAACAAACAAATAAGCAGAAAAAAAAAACCCTGTAA chr4 + 94230402 4564858 4564857 4564915 4564858 4564857 4564915 58 GGTGCTGCACGTCTGAAAAACAAAACAAACAAACAAACAAAAATCCCAAGCCCGGTAA .::.....x:....x..................:..:..:...xxxx..:...x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 146184879 44029676 +3086 chr4 + 190214555 150754522 150754521 150754565 44 AAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATAAAGTCTC chr4 + 94230402 75300457 75300456 75300500 75300457 75300456 75300500 44 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATC .................:.:.............:..xx...x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 75454065 NA +3035 chr4 + 190214555 150754523 150754522 150754556 34 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 + 94230402 75300456 75300455 75300489 75300456 75300455 75300489 34 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ..................:............... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 75454067 NA +3211 chr4 + 190214555 150754525 150754524 150754563 39 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATAAAGTC chr4 + 94230402 75300456 75300455 75300494 75300456 75300455 75300494 39 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTC ................................x...x.. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 75454069 NA +10340 chr4 + 190214555 150757339 150757338 150757621 283 CTACCAAACAACAATTACTTATGTCTGAACTTAGTAATTGATTTGCTAATGACACTC-TACAAGTCTGTTAGACCTTATGCTGTAGTCTGTCTATA---AAGGTCTTCATGTTATTTACACAAATACGACATTAATCAAGGGCAAAATTTATAGCAGCTACTCTATAAATGAGGTCAAGGCAGGTCAGACTTACATAATAAGAAGAAAA-AAAGGTTAG-TCTTTGCAGTAAAAAGGAAAATCATTATTATTATTCTTCCTGCCCCTGGGATTAAGTCTAGTAGTCAAA chr4 + 94230402 34233994 34233993 34234276 34233994 34233993 34234276 283 CTACTAGGTAACTGCTACTTA-----AAACTCAGTAACTGATTTGTTCATGATAATCATCTTACCCAGATGAACCTTACATTGTGGTTTACATGTGTGTGGGATCTCTACGTTATCTATGCTAATAAAACATTAATCAAGGGCCAAATTTATAGCAGGCACTTTATAAGTAAGGTCAGGACAGGTCAGCCTCACATAATAGGAAACAACTACAGGCTAGATCTTAACACTGTAACTGAACACCCTTGTTACTTTACCT-TGGCCCTTGGGATCAAGACTAGTAGCAAAA ....:.:::...x::......-----:....:.....:.......:.x....:.x..-.x:x.x:.x.x.::......:::...:..:.::x.:.:---::.:...::.:.....:..::.x....x:...............x.............x:...:.....:.:......:.:........x..:........:...:x..x-.x...:...-....x:..x.:x..xx...x.:.x..:...:.x.x.:.-:x....:......:...x.......:x... 21M5D31M1I38M3I110M1I9M1I38M1D30M 194/277 70.0% 283/94230402 0.0% 12/277 4.3% 116523345 73691210 +6189 chr4 + 190214555 150761775 150761774 150761868 94 TAAATTACCTTCCTTCATTGACAAGTTCGATAAAAGCAAGGCCTGCATTCTTCTGAATAGAATTTTGCCACTCCTATAAAAAAAAAAGCAAAAA chr4 + 94230402 34235261 34235260 34235354 34235261 34235260 34235354 94 TGACTTACCTTCCTTCATTGACAAGCTCTATAAAGGCAAGGCCAGCATTCTTTTGTATAGAGTTCTGCCACTCCTGAGAAAGAGAAAACAATAA .:.x.....................:..x.....:........x........:..x.....:..:..........:x:...:.:...:...x.. 94M 77/94 81.9% 94/94230402 0.0% 0/94 0.0% 116526514 73688041 +23352 chr4 + 190214555 150766484 150766483 150767012 529 ACAGAAGTTGCCAAAACTAAAAAGAATATTCCTGAACTATGCTATCCTAAACCATTTTTCTCCACTTCAGAAACAATTATCAAGGAAGGTGTTAGTCTAAACAATTTCATAAACCACAGCTCAATATAACCCTTAGTGAGTTTTAATAGTTAAAAGAAAAGCTTAATGGTCATCGTCTTTCATGATCGTTTCAATATTTCATCACAGTATTT----------ACAATTATACAGTGATGCAAAATGCATAGTACATT------TAAAGGTCTTGGTTATCCTTCTCCCAGAGGTACT-GATGAAAAACATGTTAAAAGCCTCAAATCCAACCACTAATGCAACTAAGTAATTTCAAAACACATTTCAGCACTTTGGAGAGGAAGAACT-CAAAACAAAA-CAAGAGAGTCAATAATTTCATACCTGTTCCTAAGCTGTATTTAATTGACTATCACTTCCTAAGGCCATAATTGTTGACTAGTCAATTTTTACTAAAATATACTCTTAGCTTACTGATGCTTTTAAGTCAC---ACAACAAAAACAGTGAAG chr4 + 94230402 34237264 34237263 34237792 34237264 34237263 34237792 529 ATGGAGGTTGCCAAAAGTGAAAAGAAGGGGTATTTATCATGATACTTTTCAGCATTTTTCTCTACATCAGACA---TCATCAAAAGCGGCGTTAGTCTAAACAATTTCATAAATCCCAGCTGAACACACCCTAAAGCTAGTTTTAATAGTTGAAAGAAAAGACTAATGGTCATCATATTTCACGATCCCTTCAGTATTTCCCCACAGTATATGTCCTTTCAAACAATTACAC------TCAGTATGCATATTGCATTATTATATCAGCATCTTAGTTATCCATCTCCCAAAGGTATTAGGGAAAAAACACGTTAAAAGCCTCAAACTCAACCACTAATGCAACTAAATAACTACAAAACACATTTCAGCACTTTCCTAAGGAAGGACTGTAAGAGAAGATCAACAAAGTCAATAATTTCATACCTGTT-CTAAGCTGTACTTAATTGACCATCATTTCCTATGGCTATAAATGTTTAGTA----------ACTGAAAGACATAATCTACTT-TTAATGCTCTT-GGTCACTGTACAACGAGAATAGTGAAG .::..:..........x.:.......x:xx:x.xx.::...x..:::.xx.x..........:..x.....x.---.:.....:::x..:.......................:.x.....x..:.:.x..:xx..:x.............:.........x:...........:.x.....:....x:....:......x:........x.----------.......:..------x..:x.......x.:....------.x.:x:....:.......x.......:.....:.-.:x:.......:...............::...................:...:.x.....................xxx:......:...-:..:.x..:.-...x.:......................-..........:.........:....:......x...:....x....x.x..----------...:...x.:.:xx.:x:...-:.:.....:..-:.....---.....:.:..:....... 73M3D136M10I10M6D19M6I34M1I90M1I10M1I28M1D51M10D21M1D11M1D6M3I18M 395/507 77.9% 529/94230402 0.0% 44/507 8.7% 116529220 73685335 +3171 chr4 + 190214555 150770548 150770547 150770607 60 AGAGGAAAGAAAACAAAGATTTTATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409062 4409061 4409121 4409062 4409061 4409121 60 AAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA .:..xx..::.:.:x:..::.x..:.......................x.x......... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 146361486 43853069 +3110 chr4 + 190214555 150770554 150770553 150770615 62 AAGAAAACAAAGATTTTATATATATATATATATACACACACACACACACACACACAAACACA chr4 + 94230402 74671056 74671055 74671117 74671056 74671055 74671117 62 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA .....x.:.x.:.xx...xx.:............:.:...............x.x...x.:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 76099498 NA +3555 chr4 + 190214555 150770560 150770559 150770654 95 ACAAAGATTTTATATATATATATATATACACACACACACACACACACACAAACACATA--------TACACACACAAAATAAGAAAGAAATGTAACAA-TTACA chr4 + 94230402 74671064 74671063 74671167 74671064 74671063 74671167 104 ACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAAAATGCAGAAGAAGGAATAAGTTAAATAAGTTACA .....:...xxx.:..............:...............x.x.x...:.xx..--------..x.x.::..:..x...:..x..:.xx..:..-..... 58M8I32M1I5M 71/95 74.7% 104/94230402 0.0% 9/95 9.5% 76099496 NA +3053 chr4 + 190214555 150770569 150770568 150770613 45 TTATATATATATATATATACACACACACACACACACACACAAACA chr4 + 94230402 68064824 68064823 68064868 68064824 68064823 68064868 45 TTGTATATTTATGTATATACAGATACACACAAACACACACGAACA ..:.....x...:........x.:.......x........:.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 82705745 NA +3662 chr4 + 190214555 150775764 150775763 150775959 196 AAAGGAAAAAGGACAAAATCATTAGT-TCTACAAGAAAGAATGAAAAAAAAAAAAAAAAAAAAAAGACCAGCAAGCAAGAGAGGGGAGAGGAAGGACGAGTAAGGGAAGAGAGGAGGAGGGAAAAGAGAAGAAGGAGCAGAGAAGAGAGAGGAGGGCAGAAGAGGAGAAAAGAGGGGAGAAAAAAAAGAAAGAAAAA chr4 + 94230402 62007227 62007226 62007418 62007227 62007226 62007418 192 AGGGGGGAAAGAAAGAGATCAGTGATGTTTGCA-----GAATGAAAATAAAAAAACAACAAAGAACATTTGACAACATCAGTGGAAATGCAATGTTTAAGTAAAGTCTGAAAAACAGAAAAGAAACAGATTAGGCAGGGAACATCCAAGAGGAAAGAAACAGATTGAAAAATATGGGAGAGAAAAAAAAGAAAACAA .::..::....:.x:.:....x.::.-.:.:..-----.........x.......x..x...:..x.::x.xx.:..xx..x..::.x:x:.x.xx::.....:.xxx..:.::x:..::::...x...xx.:.x..x::.x.xxx:......::.x.:x...xx::....x.x......:......:.:.:..x.. 26M1I6M5D159M 111/191 58.1% 192/94230402 0.0% 6/191 3.1% 88768537 NA +3727 chr4 + 190214555 150775764 150775763 150775953 190 AAAGGAAAAAGGACAAAATCATTAGT-TCTACAAGAAAGAATGAAAAAAAAAAAAAAAAAAAAAAGACCAGCAAGCAAGAGAGGGGAGAGGAAGGACGAGTAAGGGAAGAGAGGAGGAGGGAAAAGAGAAGAAGGAGCAGAGAAGAGAGAGGAGGGCAGAAGA--GGAGAAAAGAGGGGAGAAAAAAAAGAAA chr4 + 94230402 62006582 62006581 62006769 62006582 62006581 62006769 188 AGGGGGGAAAGAAAGAGATCAGTGATGTTTGCA-----GAATGAAAATAAAAAAACAACAAAGAACATTTGACAACATCAGTGGAAACGCAATGTTTAAGTAAAGTCTGAAAAACAGAAAAGAAACAGATTAGGCAGGGAACATCCAAGAGGAAAGAAGGAGATTGAAAAATATGGGAGAGAAAAAAAAGAAA .::..::....:.x:.:....x.::.-.:.:..-----.........x.......x..x...:..x.::x.xx.:..xx..x..::.x:x:.x.xx::.....:.xxx..:.::x:..::::...x...xx.:.x..x::.x.xxx:......::.x..:...--.:.:..x.x:..:............... 26M1I6M5D125M2I28M 111/185 60.0% 188/94230402 0.0% 8/185 4.3% 88769182 NA +44459 chr4 + 190214555 150778006 150778005 150780242 2237 AAAACTGTTCATGCTCAAGATACAGTAATCTT-AAGTGCTCAAAGTAAACTATCATTAACTTTTCAACAATGTTTGCACTTTGTGTCAGCACTCTCTCAACATCATATCTAACACAAACTTAAATAATCACATACCACAAAAGAATATAGTGTAACAATAAAGGAAAGATTTTAT-TCTATTGTGTCTTTAATCACTCTGTGAAATAG------------TAAAATAGAATA-CTGCCCTTCGGAAA---GTTTTG------GTTTCCCTTATTTTTGTGAACATA------TTCATCTAATATGTACCTGTAGCTTGTATAAATATTACAGGTCAGTTAGTAAAGAA-------------CTGAATAAAGAGAAAGTAACTATTCA-TGGCATTCA------CAAAAT--------ATATAAATATCTTAAACT---------CCAAAAAA------TTAAGATAACC--ATGCAAATCAATTATGT----------------------AATTACTATAAACA-------------------------CATTTTT-----AATTATTTGTAAATAATCAAAAAATCCTCTTGCTTTTATGTTTAGGCACATGAA---------ATATTAATATAT-----TTGC----------------AAGTA----CCTCTAAAAATCTGTATTTACAGTTTTTCAGGT-AAAACATATCTCCAGACAATAATGATCCTTCCAGTGACTTCCAAACTGGCATCAATTTACTCAAGATCTTTCA---------------------------CTAATCAATACAGAAAGCTTAATTTCCATAAAGGTGACAAAAAAGTTGCTCTAACTCTTTCCAGCTACAAGCTCTCAACAGATGATCATCATTAAGTCTGTATCAGGGCTCCACATTTAGGAGCCATATAAATGTGTCCTATTAGTACACGGTCAGTCTGTTTGGCAACTCTAGTTCTTCAGACATATGGCAATTGCTGCCCTTTGAGGTCTGAAGTCAAGTCTTTAGGGAATCTCAAAGCTTGCACTGAAATTACAAGGAGTGTTCATTAGAGACTTCTGGAGGGGAAACATGAAAGACTTCCATTAAAACTATATAAAACAGCTAATTATTTTTAAAAGATTTTTAAACCATCTAATGTTCTCAACTATAATAAAAAGTATTTACCAACTGAATTATTTTTAGAAGCA-------CTACTTCAGGACATGGGTGCAAACAGGTTTCTTCCTACCTCCTATCTCCCACCTCAATA--------------------CATACATATTTATTTTATAAGAA---TTATCAACTCAAGATTTCAATACT-----TTTAATTTAGAATTAAATTATCTCATACTTC--TAAATTCTGTCTACAGACCACTATAA---------ACATTTTCTAAACAAAGTTAT-TCTTAGAGACAAATGTTTGTTTTCTAATATTTAGCTTAGGATAATATATAGCCAACTTAAACCCAGCCAGAAATACATATGTGTTTCTTTTTAAATGTTTCTTTTTTATT--------------CAAAAGTCTGCCTCTATTTTAATTTTTATTTTATTTTAAA-CTAATAATCATAAAAAATTTTAAGCATAAAA--TGATATAAAGTATTAGTCAAT-AAAGTGGCATTTATTAGATAATATTATGC-------AAAACAGGAAAACACATGAAGGTTT-------AATGTTTACTTTTTTTAA-TATACTT----AAGTTGATAAGGAGGAGTTCAAAGAAATC----TCATATATTTACTGTCAGAATTTTGAAAAACATAAAAAGTATATTTTCTAATTAATGATTGCTTCCATTTTAACTTTTTGAATGTCTAGACACTTTTTAACTCGAGAGAAAATCATTATTTATTAAGTTTTGCAATAAAACAATCCTACTACTGAATATTTATTTCA--------GTAACAAATCTTTATAAACT--TATATAAAATTCATTAGCTTGCCTCAATCATTTCTTGAATCCACATATATGTTGGTTTCTGACAGCGTAATTCCAAAAAGTAATTACAACCTCAATCCATTTGTAAAAAGACAACAGAAAACAAGTATGTTACACCAGTTTAAAAGAATAAAAATCTAAAGAAAACAGATTACAAATGATTTATATGAATGCCTAGTGGTGAAGTTAATTACAAGTAACCCAATAAAATAGTGCCTTTATTATTGTACAGCAAGTAAAAGCTCTAGATGTAAAAACCAGAACTCTTTCTGCTGACTTCTGCATGCTCAATCCCACAGCACACAACATTAAGAATTAAACATGTGGTAAATAAGCCATATAGAAAACAGCAGTT-TTTAAGTAAAAGCAGAAAACTTTCCTGCTGTTTAACCATTTGGGGCCTTCTACTCTGAATAACAACCACTGTAAACTGGCACTATGTATTCATGGAATAAGTTTTTATGGTTAATATGAAAATGAGATTTTAATTTCAGTGCTCAAAGTTTAACTCCA chr4 + 94230402 34239815 34239814 34242234 34239815 34239814 34242234 2420 AAACTTGTTCATA-GAGAGATATTCTAATCTTTAAGTGTCTAAAGTAAACTATCAAGAACTTTTCAGCAGTGTTTGTACTTGGTGTCACCACTCTCTCAGCACCACATCCACTACAGGCATGAATGA--ACTCAGCAATAAAGAATACA------TAGCAAAAACTAGATTATATCTCAGCTGTGTTTTTCATAATTA---AAAAAAGCTAGACTGCACATTAAGTAGAATATCTGACATCTGAAAACACAACTTGTAGAGAGTTTGCTTAACATTTTTAAATCTACAAAGATACATTAAAAATGAA-----AAACAGTATCAA-ATTACGGAAAACATAACTAAAAAAATCTATCAACATTTTAATATTGAATTAACACCTACTAAGTAGAGTACAAAACAGCAAAATTTTGTAGGGTTGAGACATTTTAAATCTAAGAGCAACCAGAAAACATATTTGAGGACAACCTTATTTAGAGCAGTCATATCTGGATGCCCAAATAAAAGTGGAATTAACAACAACAGaaaaaaaaaaaaagaaaaaaaaaaCAGTAATGGGAGAACTATCTGAAACTGATTGAGAAAAAATATAATTTAAGTAATTACATACATACACCCTTCCATAGATAAACACATCACTGTTGCTGACATTTACGGAGAAAAGCAGTAGTTTGCAAAAATATTTACTGACATTTTGTCAGGGGAAAACTTATC---AAACAGCTTTGAATTTATCAA-------------------AATTTAAACAACATCTCACAAATGAAAGCTGTAACATGGAAATCTGACTAATCAATACAGAGGTTTTGATTGCAATACGGATGATAAAA--GTTACTCTAACCCTAGCTGGCTACAAGCTTTCAACTGATGATCATCATTATGCTTCTATCAGGGCTCCACATACTCAGGCTGAACAAATGCGTCCTATTAGTATATGGTCTGCCTGTTTGGCAACTCCAGT-CTGAAGACAAATGGCAGCTGCTGCCCTTCAAGGTCTGAAGTCAAGTCCTCAGGGAGTCTAAAAGCCCAACTGGAAAAATCAAGGCCTGTTCATTAGAGACTGCTCCAGGGGAAACTTGCTAGGCTGCCATCAGAACTATATAAAAGAGCTAATTATTTTTATAAGACTTTTAAACTATCAAACACACTCAGTTACAATAACAAGTATTTACTGCTGGCATTCCATTAAAAAAAAGATTGTTTTTCATCAAAAAAAAA----AAAAAAGCTAGTGAAGTCTTTGTATTAAAAAATTTAATGAGTGTTCTAGGAGAAAGTTGCATAAAAATCAACTAGATGAGACAGTTTCTCAAGGGGAGACAT-AACACTGAGGATTTAATTGTGGG--GAAATATTCCAAAATACACTCAAATCTTACTAATGAACACTAAAGGGTGAGTTGAGATTGCCTGCGTGACTCTCTGTCCCTGAAACAAGAAGTTGA---AGAGAAGTGAGATT--GCTCCTGCAAAACTGATTGAAAAGGA-CCTCTAAGGTGTATTTACTTGTTTTAAAATCTGTGCTGTTAACTAACAACTGAAAATGCAGAAGTACACAAACGTACTGATA---AGTTTGTTAAAAAGATACCGGGCTCAGCTGGTATCAAATGCCAAGGCTGAACCAAAGAACTGAAAAGTCAAAGTGAGTTGTGCCAG----TATTTTACTCCTGATAAAACACAGAAATA----AAGGTTTTTATAACCATAGTTACTTTTATAAAACATACTCTATGGAATTGTTAGAGCATTTTTCAAGTAATTCATAACCACAAAGTCATTAACT--ATTTT---AAGCATGAAA----------CTGAATCAAAGTACCGTATACTGCAACATTTT-----TCCAG---CTGCGCAGCATGACAACAATGTATTG------AACTCCAACAGTATAACAGATC-ACTGCT--ATATTTATTACATAGTATTTATTGCAAATCTTTTAAAAGTGTTATATGAAATTCATTAGTGTTCCTCAATCAGTTCTTGGATCAACATGCACATTAGCTTCCGACAGCCTAAATCAAAAAAGCAATTACAACCCCAGTCCTTATGTAAGAGGATGACAGAAAGAAACTATGTTGAACCAGTTAAAAAGAATGAAAATGTAAAGAAAACAGATTGGGAATGATTTATACCAATGCCTAGTGCTGAAGTTAATTACAACTAACCCAATAAAATAGTTCCTTTATTATCGTACAGCAAGTAATAAACTGAGACACAGAAAACAGAACTCTT--AGCTGACTTTTGCATGCTCAATTCAATAGCACACTGCACTAAGAATTAAACAAGTAGTAAACAAGCCATACAG-AAACAGCAGTTATTTAACTAAAAGCAGAAGACTCCCCTGCTGTTTAACCACTCGGGATATTCCA-TGTAAACAGAGCTTCCTATAAACTGGTATTATGTTGTTACTG-GTAAACGCCTGAAATT-ACCTTATAATGAGAGTTTAATTTCAATACCTGAAGTTTGAGTTCA ...x:.......:-xx:.....:xx.......-.....:::..............xx.........:..:......:....x......x..........:..:..:...:.x:...::.x.:...:.--..x:.x..xx........:.------:.::...::xx.....x...-..x::.....:...x..x.:.x---:...x..------------.x..:.......-...x.x.::.:...---:x:...------....x.:.x.:x...x.:..:x..------.x...:x..x...x.-----.:x:x....x..-.....:.:xx.xx..::x..:..-------------:.x....xx..:xx.::.x...:.x.-.:.x:.x..------......--------:.xx.:.:..:.....::---------...:....------.x.:..:....--..x:.:.x..:.:..:.----------------------.....x:.xx....-------------------------..x.xx.-----..:...:..x..x.:..::.:...xxx.x.x::..xx:.:x...x::....:x.---------.x..x..:.:..-----....----------------...:.----::.x:......x.x..:.x...x...x.....x-.....x....---.:...::xx...x::.x:..:-------------------......xx...x....:x..---------------------------..............::x:..:...x.x...x:.:...:....--...:.......:..xx.::..........:.....x..............x.::.x................x:xx::..::x.:.....:............:.:....x.:..............:...-..xx.....x......::..........::.................:.:.....:...x.....:::xx:x....xxx.....xx...............x..xx.........x..xx..:..x....:.:............x...............x....:........:...x..:::x....::..:.....x..........::x:x.x...x:x..x.:..:x.-------:.x.x...::.x.x::----...x.:.:.xx.xxxxx.:.:x...:xxxx.x:.:...:--------------------....x.x..:x.:.xx..:...x---..x....xxx:...:x.-..:...-----.......xx.::--:..x...::..x.x.x.--.x..x...xx...xx..x.....x.:---------.x...x:..:x:::.xx:.x.-..::x..:....:x:x...x---xx.:x.x.x..x..--.x.xx.::.x.:.::.:.x...xxx.-..xxx..x:::...x.::..x....x....x.x.x:.x..x.:.--------------..:....x::.xxx::.x:.:..x---.x...:..xx...-x..x:::x.x:.:xx::.x.:..::::x..:--...xx:....x.:.::xx.:.-......:xx.x.:::..----....x.:.-------......x::...:.----.......-------x..:x........x.x..-:.....:----:.:...x..::.x:xxx.....:x..x..----:..:.x.x.:.:.:x.x--.....---..:...:...----------..:.x.x.x::.xx.x.x:.:.x:...x....-----..:..---..x:x:.:.x:..x.:x..xx:...:------..x.::x:..:..x....:x:.-...:..--.........x..--------:.x:.........xx...x.--.....:...........:x.x.........x......:...x....::.::..:.:...:......x...x..x......:..........:..:...x.x.....:.:..::.......:x..x......:x.......x........:.....x...............:x:...........:x...........x...............x.................x..........:.............x.:x::x...:::.:...x..........--x........:............:.x.:.......x:..:.............x..:.....:........:..-...........-.....x...........:...::...............:.:...::x...:.-.x.:..:.:x:x::x..:........:.:.....xx.:.:x.-:...::x::.:x::..-.:x.x.x.......x..........:.:.:::......:.x.:.. 13M1D18M1I94M2D20M6D20M1I22M3D7M12I12M1I14M3I6M6I24M6I15M5D12M1D23M13I26M1I9M6I6M8I18M9I8M6I11M2I17M22I14M25I7M5I54M9I12M5I4M16I5M4I33M1I10M3D21M19D20M27I42M2D131M1D234M7I16M4D39M20I23M3I17M1D6M5I12M2D17M2I26M9I21M1I20M3D14M2D26M1D44M14I24M3D13M1I31M2I21M1I17M4D8M7I14M4D7M7I18M1I7M4I29M4I17M2D5M3D10M10D32M5D5M3D26M6D22M1D6M2D12M8I20M2I286M2D73M1D11M1I52M1D42M1D16M1D45M 1455/2132 68.2% 2420/94230402 0.0% 393/2132 18.4% 116538191 73676364 +3831 chr4 + 190214555 150780606 150780605 150780690 85 TATATATATATACATATATATACACGTATATATATATATATGTGTATATATATACGTGTGTGTGTGTATATATATATATGCATAC chr4 + 94230402 21109218 21109217 21109302 21109218 21109217 21109302 85 TATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ...x.....:...x:.:......x...:..:x....::.....::x:..::x.x:....:.:.......:x....::.....:.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 129671388 60543167 +3192 chr4 + 190214555 150788639 150788638 150788703 65 TAATCCCAGCTACTTGGGAAGCTGAGGCCAGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033213 76033212 76033277 76033213 76033212 76033277 65 TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:...........::.:......x..x.x...x..........::.:..x:xx:..:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 74755426 NA +25861 chr4 + 190214555 150789949 150789948 150790366 418 CCCTTTTCCTAAC-TCTCTTCTTAATCCCAAATTTAAAAGACTAGTTGTAAAACAGTAGGGTGCCAAATTAAAACACATTTTATTTTCAGATGTCTCCACACTCACAGGCTGACTTCCTGTCAGGAAGAGTTCCATTTCATTGAATACCCCAATCAGCAGGGAACTTGCAGAATTAAGTGCCAGTTGATATTACTTTGTTTTGCATTTACCACCCTTGAGAATAATGTTCAAAGATCTAGTTATATAGTCAGCATGGTATCATCCTTCTGACTAGACTGCCAAGCCACAGGGTGTACTGCCAGTTCCACAAAATTTACCTCAAA-GGTTGTG-TTTTCTAAATCCTAGTGTGCTGGTGAATCCATAGGACGCCTGTATT-TCAGGTCAAATCCTGAATCTAAAGTTAAATTATGTTTTTCTT chr4 + 94230402 34244141 34244140 34244561 34244141 34244140 34244561 421 CCCTCCACCAAACCTCTTTCCATGGTCTCAAATTAAACAGACTAGCTGTAAAACAGCAGGGTGTCAAATTAAGGCACGCTTTATTTTCAGAGGTCTCCACACTTCGCGGCTGACTTCCTGTCAGGAAGAGTTCCATTTCAGTGCAGAGACCCATCAGCAGGGAGCTCGCAGAATTAAGTGCCAGTTGATATTACTTTGTTTTGCATTTACCACCCATGAGAATATTGTTCAAAGATCTAGTTATAAAGTCAGCGTGGTATCATCCTTCTGACTAGACTGCCAAGCCACAGGGTGTGCT-CTCGCTGCACAAAACTCACCTTAAATGGTGGTGTTTTTTTAAGACCTAGTGTGCTGGTGAAGCAACAGGATGCCTTTTTTCTTCAGAAAAGTCTTGCTTCTGTAGCTAAATTATGTTCTTGTT ....::x..x...-...:.:.x.::..:......x..x.......:..........:......:........::...::............x...........:xxx.................................x..x.x.xx..x...........:..:................................................x........x....................x.......:.........................................:..-.:x.:.x.......:.:....:...-...x...-....:...:x.................x.x.:....:....x.x..-.:x:.xx..:..:..xx...:x..:...........:..x.. 13M1I284M1D25M1I7M1I46M1I42M 349/417 83.7% 421/94230402 0.0% 5/417 1.2% 116545808 73668747 +127501 chr4 + 190214555 150794747 150794746 150798717 3971 TTAATTACTCAGACAGGATGCCAGTCCAGACTACATGGTGCTTCTAGTTTTTCTATATACTGTATGCATTTCTGATAAATGGGAAAAGAATAGATGACCTGGCAGAAGGCTCAGACAATAATATGTGATTTACAGGACAAGAATGCAGCTACCACAAGATTTATCTGACAGCCCTCTCCGATAGTGGACTGTTGAGTATCCGAAGGAATGATTTCTAGTCTACAAAGTCTACTACTGAGTAGCCATACACATTATTTATTTATTAGATGTTTTGGGTTGAAACCATTTTTAAATGATGCACTTCACAATGCACAGTCATAAATTTAGCTTTAAACCCAAGAAGGGAGGTAGTGTTATTGGAATGTATGTCAGACTGAATTAGGACTAGCAACACAACGCTTTTATAAAGTGGCCTTGAATGCAACGTCAAGTCTTTCAAAAATGATATTAATGTCAAATGAACAAGATACAAACACTTTATATAATGCTGGAGTAATATTACTTGAAACATTTGCTTAACATTTTCTTTAAATTCATATATATTTAAAACAGGTTTATACACATATACAACAAATTTGGCACACAAGTAAGTTGCATGTTTGTGAAAAAC-------------CACCTGAAACACAGTT----------------GAGAACTTGTT----CAATTTTTGTGTATTTGCAACAGAGAACATACAGTTTCCTGAAGAATGTAAGCAGTCTTATTTTAAGAAATAAAGAGGATTTAAATTGATCTTTGGAACTTCAGTCATTCTTGAATTATTCTACATGGGATTCAACAGATGAATAAATCTATTTTTACAAA----CCTCATATTTTAATTATACTCAAAAATATAATGCTGAGTATTATGAGAGGTTTCCAACTCTAATTAATAACATTTTGCCTAAACAATATTAACATTTAAATAGACTAAAATATGAAATGGTGCCTAATCAACTATTATATATAGCCTAATCAACTATTGGTAAATGAGTGGACATTGAAAATGACAATCTT---------AGTCAAAACAAATATATAGTGATCTGTTTGGTTTTATTGTCAGCTAACCAAATGTGATCATTTCCTCATTTCTTAAATTTAGGCTCTAAATTCTCTTTTACAAATAAA--ATGCAGTTAAACACCTTATTAAAAA-----TAACACAAAAAGAATATAAGTTTTGAATGGATTCAAGAAAAATAATCAGAGCA-TGGCTGATTGTCATGAAATTAACACCAACTAATTTGTAAAGTTCTAAATCAAATTTGCAGATGTTAAGTTCATAAGCATATCCCATTATTTACGTGATTAAAAAGTAGTTTTTGACCTGATCTTTCGATCTTTGGCACTCCGTCCTCTCCATCTCCTCTTAAAAAATTAATTAAAATTTTAGCAAGATGGTAGC-TTTTGCTTCCCACCCTATCTCAGACCAAAAAA----------AATTATCAATCAAACTCAAG-CCATCCCCACCCAGGATCTGTAAAATGTCGACTTGAAATTCAATTTCATATCTCTTAAGCTTTCATGTAGAAAAAGACAGTTCACTTCTTAACAAAATAAATCACTTTTGTGATTGCCAAGTTGACCTCTTTGAATTAGGAAAATTCAAAGTGAAAAATGTAATTATCACCCCAGAACAATCTGTATACATCTGGAGCTAATTCTAGCTTCATTTTTCACATCATTTTTCACACTGTGCTACATCTTGTAGAGATGCCATGGAACTTTTGAAGAACTCACAAAAAATGTTAAGGACTTCAAATACCCAATAATGTATTT----TATT---CAAACAAAAACCTTGACAATTTCTGACTTGAAACTTACTGTACTATATGATCTTCATATCCC--ATTTGATTGCATTAGTATTAAACAGTACTGTGACATACATGATAAATAGGCATATTAAAACATGTC----ATTCTTTATCTTTGCAGCTCCTAACATTAAAATATGCAATATACTATA-----------------TTGGAAATAGCTTCCATG----TACCAAAAATA-----------CATTCGATTCTTCT--AAACTAGAAAGTAAAACTTCATTGTGAAAATTCACCTATGAAATAATTATATCA--CTATGAACAATAAATTTA-TATTC----------------------TTGTAAGGAAACATCCAAAACCAT--------------------AAGAATGCTCTTTTAA--------AGTGAGGGCAATTTCATGT----AGACATAAGAATGCT--------ATATGGCAATTTCTATCCAAGAAAGAAACAATTATTTCTAA--TCAAATGGCTTAATGAGAAATTTTATCTAGTCAGCTTTTGAAGAAATGGA-----GTTTTCTAAATGAGATGATTAAATTATAGAACATGATTCTCAGTAAATCTAAGAATCACAAGCCTACTAA-----GTAACTACTTCTCACAAGTTCATTACAAAAATCCATTAGGTGTAATCTCTAGAAGTAATTGTTCTTATCGCACCTTATTGACAATGCATAGTATTGATTTTTCACACCTTCTATGATTCTTTAATTTATATTCATGAAATGTCCATCAGCACAGTCTAAATAAATTTGGC-ATATAGGCACTAAAACAAATAAATCGATGCAAAGAAACATTAATTTTGCATTATCCTTATTCGTTAGGCAAGTAAACCATGAGAGTTGTAAATGAAGGTCAAAGGTTTTGAAATGGGTCAAAACCCTTGACCTCTAGACCAATACCTTTCCTATTAAAAAAGGCTATTTTAAAGTTTTAAGTGGGGGAATTTACTACCACCAAGATATCACTTTAAAAGACTACAAAGAAAACTCTCAATAAAAACATTCATCTGTTTAATTGCAAAACAG-------------AAAAGAAAACCT------CACAGGATACATGATTTTTATATAAGTTTTTTTTAAAAAAATCATTAAAGTTTACCACATGAGGTACAAGGT-------------------TTTGGAACACCTAAAATAATTTTGCTCTTAGGAATTTATTTTCTACATCTT----ATTATGATAGCTGCCACATTTTTGTTAATGTTTTCCCAAATCTACTGTGCATGTCAAAAATAATTACCAATGACAAGGATTCAAAATCATTTATCGCTCATTTTATAACCTCTGCACAAAATGGAAGTAAACCCATAATTCCCAGTGGAGTCAGCGTGGCACTCCACAAGATATAGAAATAAATCTGTTTTTATAACCTTAATATAT-----------------------------ACAGCAAAGAAAT---------TATCAAGATC-ATTTGATCTGGACATTT----TTAAAGTGACTCTAAAAACTTTTGTTTCTCACTTCCTCTCATGCTTGCT--TCAAAATTATCTGCAAGTATCAAAAATAAGAAGTAATCCTTTT-GCAATACAA----------ACAAAATTATTTTAAAACAGC---AAACTCACAATTTTATTATACCAAAAATTTCAGTAATGCAAATATAAAATCCCCCATGAAAACAAATTC--ATGTG---ATAATCTACTTTTAATTCAACATTTATTCTTGCCACTCACCTGAGAACACAGTAGCATAACCAATTCCACAACTGAACTACTCGACTTCATGCAAACCAGACCTATTTTAAAGAGAATTTTAAAAAAGAAGTTATAAAGA-AAACAAATGAGGATTTGTTACAATT---TCATCCAAACTGTT-------------------TCTTCAAA------------TTATTTTTTCAGACTATTAATAGTGCACATTTAATCACATGATCAA-ATAAGGTACACTATAGTTAGTTCAAAGCTGGCTTCAAAACTACCACCATTTTTGTAAAGTATTTCATTTCAGCTTTCAA--AATACTAAAACATT-----TATTAC----AACTTCATATATAATGACAATTCACAATACTCATAGAAATGTGCACAACATATGCCATATT-GATCAATATCATCTACATTTTG----TTTTGGAGAGAGTTGATCGTTATACATGCAGAGAAGGGAAATGGCTCCCTGACCTTTGCTTTCTCCACTACACTCTCTCCCTTCAACCCTCTAGCTATCAATCAAGTTTCCATTTTGTTTCATGGCAGCAGACATCCCAAACACTCTTATTAGTACCTTGACCTCTGACCTCACACTAAACCTTAACAGAAATGCAAGCCGTTGTCTGTTATATATTCTTGATTTCTTATAAATTAATTCATTTACTTTTATGTTTCATTTT chr4 + 94230402 34250834 34250833 34254817 34250834 34250833 34254817 3984 TTAATTACCCCAACAGGATACCAGCCCAGACTACGTGGTGCTTCTAGGTTCACTGTA--CTGTATGCATTTCTGATAAATGGGAAAAGAATAGATGACCGGGCAGAAGGCTCAGACAATAACATGTGATTTACAGGACATGAATACAGCTACTGTAAGATTTATCTGACAGCCCTCTCCGATAGTGGACTGTTGAGTATCCGATGGAATGATTTCTAGTCTGGAAAGTCTGCTACTGAGTAGCCATACACATTATTTATTTATTAGATGTTTTGGGTTGAAACCATTTTTAAATGATGCACTTCACAATGCCCAGCCATAAATTTAGTTTTAAACCCTAGAAGGGAGGTAGTGTTATTGGAATGTGTGTCAGACTGAATTAGGATGAGCAACACAACGCTTTTATAAAGTGGCCTTGAATGCAACGTCGATTCTTTCAAAAATGATATTAATGTCAAATAAGCAGG-----AACGCTT----------TGCAGTAATATTAAATGAAGGATTTCTTTGTGA-------TAGATTTATATAAATGAAA-----GTATACACACAGACACA----------TGCCTGAAAATGTAGCGTGTCTATCAAAAACACACAACTGTTTTCACCTTAGAAACAGCCTTTTGTCTGCATCTCAAACCACTTGTTTCTCCTCTTACTTTGCGTAAACAATAAAACA-ATACATC-------AAAATATAAACA----------CGAAAACAAAACATAGTAGTGATGGTTTTT-----TTCA--TGTGCCTGAA------TACACAAACTTCAAAGGAGAA--AAATC---ATTAACAAGGTGCCATAATACTTTGA-------CGGAAATATTTTCTTAAGATTTTTAA--------TCACTCTACCGGAGAAGGTGAAG--TGATTCATCTCTGTATTTCTATGGGGAAAAATTACTTGTGAGACTTCAT----TGTTCTATTTTG-------AACTACTA-----------------AAAAAAAAAAATCTTCCAGACATAAATCtaaataaatatat--------------------------ttaaaaaaat----------------------aaatCAAGCGCT--------TACAACAAATATATGATGC-TTAAAACAAATTTTCAGAAAGAGGTTAACATAAAAACA-------------------CCAAAGAAATTAATCAGAACAGTCTTTCAGTTTCATAAAATGATGGCTGACAAATTTGTGAAGTTTTAAATCAAATTTGCAGATACTTACTTTGTAACTATGGCACATTATTTATGTGATTAAAAACTAGTATTTGACCTGATCTTTTGATCTTTGGCACTTCATCCTCTCCATCTCCTCtt-aaaaattaattaaaattttaGCAAAAGGATATCACTTCCCTTCCCACCCCATCTCGGTCAAAAAAAATAAAAAAGGAAAAATCAATCAAGCTCAATCCCATCTCCTCCCAGTATCTGTAAACCGTCGTCCTGAAATTCAATTTCATATCTCTCAAGCTTTCATGTAGCAAAAGACAGTTCACTTCTTAACAAAATAAATCACTTCTGTGATTGCCATGCTGACCTCTTTGAATTAGGAAAATTCAAAGTGAAAAATGTAATTATCACCCCAGAACAATCTGTATACATCTGGAGCTAATTTTAGATTCATTTCTCACATCATTTTTCATATTCTGCCAAAAAC--TACAGCTGCTATGCAACTT-----------AAAAAAGATTTTGAGGTCTTTGTGACCTTATTGGTTTATTTCTACTATTTCACAAAGAACAACCC---CAGTCTC-----AGCAACCAGCACTACTAAGCAATCACTATATCCTCAATTTGATTAAATTAGTATTAAATGGCACTGTGACACGTATGACAAATAGATGCATTAGAGCACGTCATTTATTCCTTATCCCTTCCACTTCCCACAACCAAACAAGTGACGTACAGTACAGAGCACAACATGATTTTAAAAGAAGATTAGATTACCCTACCAAAAATAGAAGGAAAGGTCAATCGTTAATTATTGAAACCAGGAGAAAGGATACCA-----AAAACTAATTTTTTAAATGGTAATACAAAGCTTTCAGACACATATTTAGTACTCAGATTAGTTTTACTCTAACACATTAAAGAGCAACATTAAAACTTGTATATGGATTTACTGGTGACAAAGAAT-CTTTTTTAATTTATATCAGTAA---CAAGTTCATGTTCTCTAGTTTAAGAATGCCTGCTTCCAGCATTGCAACATGTA----------AAATAACCATCCCTAAATTCCAGAATTTCCACAAGGA---CTATAAAATTCCTTTCAGAATAAAAGCACATTTTTTTTCTGAAGAAAATGGAAAGCTAGATGAGCAAATTTCTACATACATTCATTAGTAATAAACTGGCTAGAAAACATAACTACTCTTCACTAGTTCATTGT-AAAATCTATTAGGTGTAATCTCCAGAAGTAACTGTTCTTATTGCATTTTATTGACAATGCAGACTACCGATTTTTCACACCTTCTATGATTCTTTCATTTGTATTCATGAAATGTCTATCAGCACAGTCTAAATAAATTTGGCAATATAGGCACTAAAACGAATAAATCGATGTGAAGAAACATTAATTTTGCATTATCCTTATTCGTCAGGCAAGCAAACCATAAGGGTTGTAAATGAAGGTCAAAGGTTTTGAAATGGGTCAGAACCCTTGACCTCTAGACCAATACCATTCCCATTAAAAAAGGCTATTTTAAAGTTTTAAGTAGGGGAATTTACTACCAGAAAGGTATCATTTT-TAAGGCACCAAAAGAAAGGCTCAATAAAAACATTCTTCCATTTAATTAGAAAAAAGAAAGCAATAATCAAAAAGAAAATCCAATTAATACAGCATATAACATTCCTTGATCA--TAATTTTGAGGAAGTTATTAGGCTCTGTCTCTTTTTCTACAAATTTAAGAATATGAAAATTGCATCTGAAATGTCTAAAGCTCCTTTGCTTTTAGAAACGGAGAAAGTACCAGTTGACAACCAGGATTGCTTATACATTTTTCT----------CCAACTCTTAT-TGCTCGTC-AAATCAATTAAGAATGACAGGATTTCAAAAGCATTTATCACTCATTTCATAATCTCTACACAAAAGGAAA--AATTCTACTCATCCCAGAGGATTCAGCATG-------CCAAGATGCAGATATCAATCTGTTTCTATATCCTTAATATTTCATTGATTCTATTTCATCTTGCAAAAATGATAGTATAGAAATACTTAGGCATGTCAACTTCAAGGTTATGTAAACACTCAAAAGCAAGGTAACG-TAAAACCTTTAGTATCTT-CTCTCTCTCCAACCTAGTAGTCAAAAGT-------GATATTAAAAA----AACTTCTGCTTTTAGTAACACAATAGACCTTGCATCtaattttttaaaaataattagaagatcttaaatttgaagt----aaaattt----------aaaataaaattttC----ACAGCAATTTCTACTGTGTTCAGAGAACAATTCAAATGTTACATAAAT--------CTCACCTGTGAGCAAAGAAGCATCACCAGCTCCACAACTGAACTGCTAGATTTCATACACACAAGGCCTA---CAAAAGGAA----AAAATATATGTATTAGACATAAATGCATGTTTATTTGGCATTGTTTGCTAACACAAAATATTGTAATGTGTAATAGAGGCATCTCAACAATAAAAGAAAGCTGACATTCTCATACCACTTACAGTAGAATTTTG--TACTTTATCAGCATAAAATAAAATTTTGTGAG---GGAG-----------------ACCATACATTCCATGCTTTGCATCTAAAGATGCAGCTAATAGTAATACATTACCTCCATTACTCAGAGTTTCATAAATGTTTGTATTTCAAAATAATC--GGAAGTATGGTTAACATATGTTATATTAAATCCACTGTATCTACATTTTGCTACTTCTTGAAGGATTGGGTCATTATATATGCAGAGAAGGGAAATGGCTTTATGACCTTTGCTTTCTCCACTGCACGTTCTCCATTCAGCCC-CCAGCTATCAATCAAGTTTCCATTTTGTTTCATGGCAGCAGACATCCCAAACACTCTTATTAGTACTTTGACCCCTAACCTCACACTAAACCTTAGCAGAAGTGCAAGCAACAACTTATTATACATTCGCAATTGTTTATAAACTAATTTGACTACTGTTATTATTTGTATT ........:.x:.......:....:.........:............x..:x..:..--........................................x.....................:.................x....:.......:::................................................x.................:x.......:................................................................................x...:...........:.........x...........................:..................:x..........................................:.x............................:.:..:.-----...:...----------..x..........xx....:x....x:..:xx.-------..:...:.....x..xx..-----..x..:.....x.:...----------::.x::.:x.x..x..:...:.:.x......-------------.....x.:.x....::----------------:.xx.......----.xx..x:.x..::.xx:...:.:.:x.-.....x:-------.:...:...:..----------x::...:...:x:x.x.x:x:x..:.:...-----....--::.x.:....------....::::x.....x:..x:.--.....---x..x....:----.x.x...:...:.-------.::......xx.x:.:..xx..x.:.--------:x......x:x:.x..x:.xxx.--.:.x:x..x.:x::....xx..:.:xx.....xxxxx:..:x:.:.x..----.:..x...x.x.-------.....:.:-----------------:....x:.x......---------.:..x...:........--------------------------:...xx....----------------------..x.:.:..x..--------.x:x.......x.--....-x.x.....xx..x.:.:...-----.....:.....x.-------------------:...::...x........:..-.xx:.x.x.x....:....x.xx:.::..x.......:.....:..................::.x.x..::...x:..:x.x.........:...........x....x...............:.............:.:..................-........................:.x.:..x.-:..:x..........:.....:.x.x......----------..xx.........:.....x-.....:..x.....x.........x:....x.:......................:..............x....................................:...........x.:.................................................................................:...x.......:...............:.:.x...:.x.xx:--..x..x...:...x.....-----------.x....:..x..:...x...::x:xx.::.x.::.x.....----....---....x..x....:---..:.:..-----x.x...:x:.xx.....x:::...x::......:--........:x............::.:.........:::....:......::::....:.:..:...----....:.....::.x.x:..:.:x...x:x...:.x.::.::...x:..-----------------..::..:x..x..xx..x----...........-----------..x...x.xx..x.--....:..:.::x.::.:x:..-----....:.x.::.x.x....::.x...:x.--..x.x.:xx.:.x.....-..:..----------------------..:x.::.x.....:x...x:::.--------------------......-..:......--------...:.---...x.......----x:::x.........:--------::..x....:x.x..----------...:..::..::....--..x.:x:x:.:x.::..:.---:...xx.:.:xx:..:x...x...x.x.-----x......:..x:.:...:xx.:x.x:xx..:..x:x....xx:..x..::.xx.:.x.:..:.:x:...:-----:........::....x........::-......:...............:........:.........:...::..............x.x..::...........................x....:...............:..........................-................:............::.................................:.......:.......:..:....................................:.........................x....:..............................:................xx...:.....:...-x...:.xx....::...xx................x..::.......:x....x..-------------.........:.:------:....x...:.xx...::.xx..x.--.xx....:.::..:.:....::x.:.::.x.x.xxxx.....:x.-------------------.:..:..:::.....::xx:......:....:..:xx.xxxxx...xxx..----.::.x...x...xx:........x.----------....x...xx.-...x:...-...x:.....xx.......:.:x.......x........:.......:....:....:.......x.:..--..x:.:.:xxx......x...x.....:..-------x......::...x..x.........:....x.........x.-----------------------------.:..:.x......---------.:....xx..-.xx.x..x.::...:.:----x:..:..:..x-.....x....x..x...:-..::.....xx:.:.:x.--......x.-------::...:.....----..x.xx.x.....-.:..:....----------.:xx....x...x....:.::---..:x..x:..x...:xx:.----.......----------..x.......:::.----.x.:...x...--x....---.x.:xx:.x..:x...x:x....xx..--------........x..:..x..x.....x....::..............:..x..:.....:..x..x..:....---:...::...----....x.x.x..xx..:.x.-...::x...xxx.....x:.:x:..---.x.:x....x.:..-------------------...:x.x.------------.x.:x..:...x..:.:.x.:...:x.xx...:--:..x.x....:-....::..x.x.x.x..x..---::..-----------------.....x:x.x:x.x.:x..x...:.x.:xx.x..:--....x...x.....-----:.....----.::......x..:x.x::.x....x....x..--:...:.:..xx:........::.....-:...x.:xx:............----..:.x..::..x.x.:..:.....:.....................::x....................:...x:.....x....:...-.:................................................................:......:..:..................:.....:.......x::x:::.:.....:....x::...x:.......:.....::x:....x....xx..::.x.. 57M2D407M5D7M10D33M7D19M5D17M10D31M13I16M16I11M4I27M1D7M7D12M10D30M5D4M2D10M6D21M2D5M3D9M4I13M7D26M8D23M2D49M4D12M7D8M17D15M9I17M26D10M22D12M8D13M2I4M1D20M5I13M19D21M1I160M1D33M1I32M10I20M1I246M2D19M11D41M4I4M3I13M3D7M5D34M2I66M4I48M17I18M4I11M11I14M2I21M5D28M2I18M1I5M22I24M20I6M1D9M8I5M3D11M4I15M8I15M10D16M2I19M3D28M5I70M5I26M1D143M1I214M1D56M13I12M6I25M2D45M19I51M4I25M10D11M1D8M1D70M2D30M7D42M29I13M9I10M1I17M4I11M1D18M1D18M2I8M7D11M4D13M1I9M10I21M3I19M4D7M10D14M4D11M2I5M3I27M8D70M3D9M4D19M1I25M3I14M19I8M12I33M2D11M1I20M3D4M17D35M2I14M5I6M4I32M2D27M1I22M4I89M1D172M 2749/3635 75.6% 3984/94230402 0.0% 685/3635 18.8% 116543913 73670642 +3057 chr4 + 190214555 150802090 150802089 150802162 73 TGCGCCTGTAGTCCCAACTACTTGAGAGGCTAAGGTGGGAGGATCAACTGAGCCCAGGAAGACAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:...:........:.....:..x:xx.x.:.x..x:...:.....:.:xx:x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 74768885 NA +3630 chr4 + 190214555 150803022 150803021 150803102 81 CAAAAAAAAAAA----AAAAAAAAACTAAAAACAAAAACAAAAACAAACAAAAAAAAAATATATATACACACACACACACACACA chr4 + 94230402 78347548 78347547 78347630 78347548 78347547 78347630 83 CAAAAGAAAAAACCATGAAAAACAAC--AAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....:......----:.....x...--........x.x:....x..x...x.x..xx.:.......:..............x.. 12M4I10M2D57M 64/79 81.0% 83/94230402 0.0% 6/79 7.6% 72455474 NA +3906 chr4 + 190214555 150803029 150803028 150803104 76 AAAAAAAAAAAAAACTAAAAACAAAAACAAAAACAAACAAAAAAAAAA----------TATATATACACACACACACACACACACA chr4 + 94230402 78347546 78347545 78347630 78347546 78347545 78347630 85 AACAAAAGAAAAAACCATGAAAAACAACAAAA-CAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ..x....:.......:.x:..x..x.......-.......:.......----------..:.....:.:..............x.. 32M1D15M10I28M 63/75 84.0% 85/94230402 0.0% 11/75 14.7% 72455483 NA +3085 chr4 + 190214555 150803068 150803067 150803164 97 AAAAAAAAATATATATACACACACACACACACACACACACACATATATACACACACAAATATATATATGTCTATATAAACATATATATTTCTTAAAG chr4 + 94230402 74526046 74526045 74526138 74526046 74526045 74526138 93 AAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGT----ATTTAGATTGCTTCAGG ....x.xx:..x..xx.x.x....xx.x.:x............:..:x...:.............::.:.x...:.----..x..x...x...x.:. 76M4D17M 65/93 69.9% 93/94230402 0.0% 4/93 4.3% 76277022 NA +3262 chr4 + 190214555 150803075 150803074 150803121 47 AATATATATACACACACACACACACACACACACACATATATACACAC chr4 + 94230402 46140855 46140854 46140901 46140855 46140854 46140901 47 AATATATATACACACACTCTCACATACACACACGTGTATATACAGAC .................x.x....:........:::........x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 104662220 85552335 +3049 chr4 + 190214555 150803078 150803077 150803123 46 ATATATACACACACACACACACACACACACACATATATACACACAC chr4 + 94230402 46140856 46140855 46140901 46140856 46140855 46140901 46 ATATATATACACACACTCTCACATACACACACGTGTATATACAGAC .......:........x.x....:........:.:....:...x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 104662222 85552333 +4162 chr4 + 190214555 150805170 150805169 150805395 226 AAGAAAAAAAAAAGGAAGGAAGGAAGGCAGAAG---------GAAGGAAGGAAGGAAGGAAAGGAAAGGAA---------AGGAAAAGGAGAAGGAAAGGAGAAGGAAACGAGAAGGAAAGGAAAG---GAAAGGAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGAAA chr4 + 94230402 84887573 84887572 84887807 84887573 84887572 84887807 235 AAGAAAAAAAAAAAAAAAGACCAGAATTTGCAGTTACAGTCTGGAGACATTATGAAAGAAATGGGAGAGTATCATGTTTGAGGAGAAAGGGAGGAAAAGGTA---GAAACAAAATAGATAGTTAAATTAGCAATGAGAAGGGTGAAACAGGAAATTAAGTG---------GTATTTAAAAGAACTGGGGAGTGGGAGAGAAGACAAGAAAAGGAAAATATAGGAATGATTGGGAAGAGGAGAGAAAA .............::..:..xx::.:x:x.x..---------.:..:x.xx.x.:...:..x..:.::.x.---------....:..:.:..:.:.....x:---.....:.:.x:..x..xx..:---.x..x.......:x:::.x......xx..:x.---------.x.xxx...:...xx.::::.x.:::......:x............:x.x.....x.:xx.....:....:..:... 33M9I29M9I22M3D21M3I32M9D77M 135/214 63.1% 235/94230402 0.0% 33/214 15.4% 65917597 NA +3256 chr4 + 190214555 150805206 150805205 150805286 81 GGAAGGAAGGAAGGAAAGGAAAGGAAAGGAAAAGGAGAAGGAAA-----GGAGAAGGAAACGAGAAG-------GAAAGGAAAGGAAAGGAGA chr4 + 94230402 32265570 32265569 32265662 32265570 32265569 32265662 93 GGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAGA .........:..:..:....:....:...:.::.:.........-----:.....:x.:::x..x..-------....x::.:::........ 44M5I18M7I19M 58/81 71.6% 93/94230402 0.0% 12/81 14.8% 118539636 71674919 +3509 chr4 + 190214555 150805230 150805229 150805301 72 AAAGGAAAAGGAGAAGGAAAGGAGAAGGAAACGAGAAGGAAAGGAAAGGAAAGGAGAAGGAAAGGAAAGGAA chr4 + 94230402 73744717 73744716 73744788 73744717 73744716 73744788 72 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAA .........:..:.:.......:...:..:.x:..::.:.....:::..::x..:.x...::x......x.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 77060513 NA +3668 chr4 + 190214555 150805282 150805281 150805445 164 GGAGAAGGAAAGGAAA------GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA----------AAGGAAAGGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGAAAGGAAGGGAAAAGGAAAGGAAGGGAAAGGAAAGGAAAGGAAAGGAAGGAAA chr4 + 94230402 14751827 14751826 14752006 14751827 14751826 14752006 180 GGAGAAAGTAAGAAAACCTCTGGCAATATAAAGGAGATCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAA ......:.x...:...------.x..x:x......:.xxx..x::...:..x::.----------::..:..:...:x.......x:x::...x::..x:x.....x..:::.:.:.::....xx::....:.:....:.x.:....x...:.x..::xx.:.::..:x..::....:.. 16M6I33M10I115M 97/164 59.1% 180/94230402 0.0% 16/164 9.8% 136053455 54161100 +3043 chr4 + 190214555 150805317 150805316 150805390 74 AGGAAAGGAAAGGAAAGGAAAGGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAA chr4 + 94230402 38078778 38078777 38078851 38078778 38078777 38078851 74 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAA ..x..:::.....:..:.....:.:....:...:...x.x..:....xx.xx.x::..::..x......::... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 112726539 77488016 +4130 chr4 + 190214555 150805320 150805319 150805547 228 AAAGGAAAGGAAAGGAAAGGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGAAAGGAAG--------------------------GGAAAAGGAAA----------GGAAGGGAAAGGAAAGGAAAGGAAAGGAAGGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGAAGGAGGAGAAAGAGAAGGAAAGGAAAAGGAAAGGAAAGGAAGGGAGAAGGA chr4 + 94230402 8397326 8397325 8397586 8397326 8397325 8397586 261 AATGGCAACGAGAATAAGAGAAAAGCAGCAACACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGG---GGAGTAGAAGGGTAAAAGA ..x..x..x..:.:x..::..:...x..x.:x.x..x..:x.x....:..:....:x..::.....:x:..x::x.....:--------------------------...:...x.x.----------:..:xx::......:x..:..::.....x::.:x..::.....x:::x:..:x...::x.:..::::...:x....x.x.::...x.x:..:x.:.:.....xx.:.:......---...:x:......x:..:.. 81M26I11M10I114M3D19M 133/225 59.1% 261/94230402 0.0% 39/225 17.3% 142407994 47806561 +4205 chr4 + 190214555 150805362 150805361 150805533 172 AAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGA-AAGGAAGGGAAAAGGAAAGGAAGGGAA-AGGAAAGGAAAGGAAAGGAAGGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGAAG-----GAGGAGAAAGAGAAGGAAAGGAAAAGG-AAAGGAAA chr4 + 94230402 34805279 34805278 34805458 34805279 34805278 34805458 180 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAA ..x.:.:::......xx....:x:..:..:..-:............::...x.x::::..-:..:x.x...x.:x..:.x.x....:.:....x.x...:.x:.:.x::.:::.:...x...:x.x:..:..:xx....-----:..:.:.:...:..x..::.:.:....-.:...... 32M1I27M1I78M5I27M1I8M 106/172 61.6% 180/94230402 0.0% 8/172 4.7% 116000083 74214472 +3367 chr4 + 190214555 150805401 150805400 150805507 107 GGAAAAGGAAAGGAAGGGAAAGGAAAGGAAAGGAAAGGAAGGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGAAGGAGGAGAAA chr4 + 94230402 89498608 89498607 89498714 89498608 89498607 89498714 107 GGAAAAGAAATGGAAGGGAATAAAAATGCAGGAGGATTAAGAAGAGCAAAAAGCAAATAGGGAGGGAGCAGATGAATGAAAGAAAAAGAAGATAGGTAGAGGAAAGA .......:..x.........x::...x.x.:.:::.xx...:.:..x:...:.x..:x.::.:::::.x.::x:..x.....:...:...::x..:x:.....:.:. 107M 63/107 58.9% 107/94230402 0.0% 0/107 0.0% 61306793 NA +3149 chr4 + 190214555 150805433 150805432 150805584 152 GAAAGGAAGGAAA-----GGGAAAGGAAAGGAAAGGAAAGGAAAGGAA-----------AGGAAAGGAAAGGAAAGGAGAAGGAGGAGAAAGAGAAGGAAAGGAAAAGGAAAGG----------AAAGGAAGGGAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAA chr4 + 94230402 14751830 14751829 14752007 14751830 14751829 14752007 178 GAAAGTAAGAAAACCTCTGGCAATATAAAGGAGATCTAACAGAAGAAATAAATTGAGGTAGTGGGGGAAAGAGGTGGAGAAGTGTGAAAACAAAACATAAAGGCAGAAGAAGAAGGAGGATCAAAAAGAAGGGGAGATGAAAAGCAAGAGCAAAACTAAGGGAGACAAAAAAGGGAAA .....x...:...-----..x..x:x......:.xxx..x::...:..-----------..x:::......:::x.......x:x..:..x:.:.x:x.....x.:.:...:::----------....:.:......x.:....x..::.x..::xx.:.::..:x..::..:..... 13M5I30M11I55M10I54M 94/152 61.8% 178/94230402 0.0% 26/152 17.1% 136053603 54160952 +3335 chr4 + 190214555 150805479 150805478 150805571 93 AAAGGAAAGGAAAGGAGAAGGAGGAGAAAGAGAAGGAAAGGAAAAG-----GAAAGGAAAGGAAGGGAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGG chr4 + 94230402 15855382 15855381 15855479 15855382 15855381 15855479 98 AAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGG ..::..:..:.:x...x...:.:..xxx:..x...xx....:....-----..:..::.::....::...:.:......x.......:.x:::..... 46M5I47M 61/93 65.6% 98/94230402 0.0% 5/93 5.4% 134950097 55264458 +4754 chr4 + 190214555 150805490 150805489 150805660 171 AAGGAGAAGGA--------GGAGAAAGAGAAGGAAAGGAAAAGGAAAGGAAAGGAAGGGAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA-AAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAAA--GGAAAGGAAAGGAAAGGAGAAGGAGAAGGAAAGGAAAGGAAAGGAAGGGAG chr4 + 94230402 34805283 34805282 34805462 34805283 34805282 34805462 180 AAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAA--GAAGGCAGAGGAAAACAG ..........:--------..:......x:.....:......::...x.x:.::..x..:.x.x...x.:x..:.x.x.:....:....x.-.:...x....x.::::.....:x:...x:x:::....--.:.:x.xx..:....:.....::x..:....--...:.x.:.....::x.. 11M8I72M1I37M2I31M2D18M 111/169 65.7% 180/94230402 0.0% 13/169 7.7% 116000207 74214348 +10496 chr4 + 190214555 150806218 150806217 150806419 202 TTTTAATCCTGAAATATAAATACATACAAATAAAA--------TAAAGAAAAACCACTTACTTGTTCCTTCTATAAGCAGTTCTTGTCCATGGCTACCCAAAAGTGTCCGAGAAAGAAAAGGTGCAAAATCCACAAAAATCTCACGAAGGAGAGGAGCTGCCTTTTCCAAAGCGTGTTCAAGCCTCTCTGTAATACTAAGGAAAAGACAT chr4 + 94230402 34256442 34256441 34256647 34256442 34256441 34256647 206 TTTTGAGTCTCTAAGATAAAATAAAACAAATGGATATATTTCTTAATGGAAA----CTTACTTGTACCTTCTATCAGCAACTCCTGTCCATGGCTGCCCAAAAGAGTTCGAGAAAGAAAGGGAGCAAAATCCACAAAAATCTCTCTCAGAAGTGGGGCAGCTTTTTCCAAAGCATGTTCAAGTCTGTCTGTAATACTAGTAAAAAGATGT ....:.x:..xx..x.....xxx.x......::.x--------...x.:...----.........x........x....::..:...........:........x..:...........:..x....................x.xx..:..x..:..x..:...........:........:..x............:x:......::. 35M8I9M4D154M 157/198 79.3% 206/94230402 0.0% 12/198 6.1% 116549776 73664779 +5158 chr4 + 190214555 150808275 150808274 150808411 137 ATCAAAAGGTA---TAAATCACAATATTCAAGTTAGTAGCTTAAA-----TACCTCATATTTGAAACCGGATCTTGTGAAACTGAATCAACTGTTGGAACTGAGGGCAATTTTGCATTAGATGATCTACTGCCTATAAAAGAAAA chr4 + 94230402 34256863 34256862 34257007 34256863 34256862 34257007 145 ATCAAAATGTAAGCCACAGCACAGCTCTTCAGATGTCCATTTAAAGAATTTACCTCATATTTGAAGCAGAATCCTCAGGCACTGAAGAAACTGTAGGGACAGATGGCAGTTTTGAATTAGATGATCGCCTTCCTACAAGAGAGAA .......x...---:.x.x....::x:.:x..x.:x:x::.....-----...............:.x.:...:.xx.:x......xx......x..:..x..x....:.....x...........xx..x....:..:...:.. 11M3I31M5I95M 98/137 71.5% 145/94230402 0.0% 8/137 5.8% 116551412 73663143 +14016 chr4 + 190214555 150812211 150812210 150812507 297 ATATTTCCAGCAAATGATCACAAATACATAAATGCAGAAGCTACCTCCTACATGTGGAATGATACTCACTTATCTTTTCCTTATCCTAGCACTGATAAACTGGCTCCTTCTAACTGACAGTTTTCCAGACATTCAAAAGAACAAAAAGGAAAATGCAAATATATCATCTGTCTAGCATCTATCTGGGGAGTAGGCAATTGTTTATTTAAGGTCCCTGCGGGTCTAAATAACTAATGTCCCTTGCAATAAAGAATCATTAAAACAAATGCCAATTTTTAACCCCTAAACACTTTAGCA chr4 + 94230402 34260469 34260468 34260762 34260469 34260468 34260762 294 ATATTTTCATCCGCAACACACATGTGGGTAAGTGCAGTAGCTACTTCAAACATGTGGAACTAAACCAACTTATCTCTTCTTTATCCTTTCACTGATAAACTGGCTCCTTCAAACTGACAGTTTTACAGACATTAGCAAGGACATAAAAGAAAATGCAAATAGATCATCTGTCTAGCACCCTTGCAGTGAA-ACCTTATTGTTTATTCAAGGTCCCCAAGGGTCTAAACAAATAATGTTTCCAGCAATAAAATATTGTTAAAGCAACTCCT--TCTGTAAGATCTTAATGCTTTAGCA ......:..x.x:xx:xx....x:.:x:...:.....x......:..xx..........:x.x..:x........:...:.......xx.....................x.............x........x:x...:...x...:.............x...............:.:x.x::.x..:-.xx:x..........:........::x.........:..x......::.:x........:x..::.....:...x.x.:--.:.x...xx:..x..::........ 190M1D79M2D25M 219/294 74.5% 294/94230402 0.0% 3/294 1.0% 116551742 73662813 +33349 chr4 + 190214555 150817115 150817114 150818456 1342 CTAACTCACCTGGTGATTCTCCTCCCATATCTGAGGCTTGGGCTGAATCTACTGAGGAAACCACACTGACAGCATTGGTAGGTATGCTTGTATTAAAGGTGGAAGGTGAGACTGCTGACTTTTTTGCTGCAACAATGACACTTCTGTA---ATAAAGAAAGTAAACAG-----ACTGAAAGA-----TACAAATTGATCTCT-----TGAATTAATTACATGAATTTCAAAACAGAAACTAGGTAGCTAACTTATTTTTCTAATTTTCTTTCTTATTTCTATTTGATGTACAATTTAGACTTTTCACCCAACATGAAATATCTTCAATACTGTCCATATTTATCTGCATTTCACTATGAAAA------TATAATAATC--TATTTAACATTTAAGCTTATATTTACCA-------------------------CATAGTA-----TTTTTAAAATTTAGGATCATCTTAATTATCTAAC----AAATAAAATATAACCAAAAG---TATTAAAGCAGAAAATTCAACGTTTCCACAAGAATTGTAAAGCACTGCTAATCTGAAATAATAAAAC--------CTTAGAAATCTTATAAGCTTAAAAAAAAAAAGCAGATATAAGCAATTTGCTAACA---------TGTATACAACCCAGTTTTTCATTTTTAAACCCCAAAGACTATATC-------TTTTGATAATATATAAAA-----------------------------AAGCAATGCA--TAGGAATAAAAACCATACGCAAAAATATCAAA---TAGTCAAAGTTCTTTATCTTGTATATTATTCAAACACAGGTATTTATGATATACCAATTTCAATTAAAATGTAATACTTTATACCAAACAGTAAGTAAAAGACCTTGTTAGGCATAACTTAAAAGGCATTTTTAATTG-AAGTTGGCTCCATAAACATGCAAAAACTCAGTTAATGAGGTAAAGAGGACAGCTGATATATAATGCACTCCCACAGCAGTGCTTACTTTTAATTACCTGGTGTTAACCATAAGCCCAAAGTCTTCAACATTCAATTTATTTAATCACATCTTTTGTTGACAGTACTATAACTGCGAGCTTCAAGTATTCCCTTAATAGCTTTAAAGTATTCAGCTTCTAAACAAAGTAACTTAGGTATTTGATCCCTATACATGCATTCAAAAGTGAAAATTATGTAATTCCAATATTTTAATAATACATTTTTGTAGTTATTTTTAAAAACACACACACAAAGCAAAATAGGTTTCGT--------------TTTACCTCAGTGCCTATCATGTGAGGGCAAACACTGTTGCCAATTAAATCAAGGTCTCTT-GTGCTAGGCATGGCTTATTCAATGTACTTCAGGGTAGCTGGTGTCACATCATTATAAGGGTGACTGCCAATGTTAACTATACACTAAAAAATAGAAGCAACAGCCACCTGAGCCCCCAATCCAAA chr4 + 94230402 34265480 34265479 34266867 34265480 34265479 34266867 1388 CTTACTCACCAGGAGATTCTCCTGACAAATCTGGGGCTTGTGCTGAATCTAAAGAAGAAACCACACTGACAGCATTTGCAGGAATACCCATAGCAGCCGTAGTAGAGGAAATGTTTGATTTCTTCGGTGGTACTACAACACTCCTACATGAAGACAAAAAGTTTATAATTAATACTGTAGGAAAGTTCACACAT-GATCCTTGTTTACAAATGTAGCACATACACTTCTG---------TGTCCTGCCAAATTGTTGTTC--ATCCTCTACTTTCTTTTTCGGTGATCTAT--------CTTATCCTTAAACA--------CTTCATTGCCACTTAGTTTTTACAATGGCTTAATATAAAATCCAGTTTATCAAAATCGCTGTGCAACA----AGCATACAGTTACAAGATAAGAAGGATAAGTGACAAAATCTATAGTAAGGGGTGCCTAGACAGTATACTCCTTCTGATGTTCTAATGTAAAACTGACAAATAACTGAAGGATATACGATAGCTAAAAACT------------------------GCCCAGCCAAATTGGTGTGTTAACACTCATACAACTTTCACATATAGtaatattaaaaaatata--taaaaataaaCATATAGTTAATAACGTAATTTTGAGTATAAC-----TGTATATAATTAAAATCTGATTGACATATCAAAATACTCTTAGCAATAGAAGAAATTATCCATTTTTTATGCGAGTTTAATTTCAGGCCTTGCAGTCAGCACTAAAGAGGAAAAGATGCAATGTAGGAAGTTAGGCACAGAGATTTATCTCGTATGTTACT--ACGACATCTATTTATGCCATACAAATTTCAATTAAATTGTAGCACTTTATTCCAAA---TACCTAAAAGGCCTTGTTAAGCATA-CGTTAAAGGCATTTTTAATTGCAAGTTAGCTCCATAAACATGCAAAAACCCAGCTAATGAGGTAAAGAGTACAGCTGATATATAATGCACTCCCACAGCAGCGCTTACTTTTAATTACCTGGTGTTAACCGTAAGCCGAAAGTCTTCAACATTCAATTTATTTAATCACATCTTTTGTTGGCAGTACTATAACCACAGACTGAAACTATTCCCTTAATAGCTTTAAAACATTCATTTTCTAAGTAAAGTAACTTAGAAA--TGACCC--------AAATTAAGGTGTGATAAT--AGTAATCAAGAAGTTCTGTTAA-ATATTTCTAAAATCATTCTT---GCTACA---ATGAAGAAAAGAATGTATTGTATTTGACTCCCTTCTTTGGCTCAAAGGATGTCACA-GAAGCTAGACAACATTACTGACCAAATCAACCCTTCTTAATGGCAGGAGTAG-GCAGCCACCATACTTGGAGGTAGTACATGTCATATCATTATAAGGGTGACTGCTAATGTTAACTATACACTAAAAAATAGAAGCAACAA-CACCTGAGCCCCAAGTCTAGA ..x.......x..x.........xx..x.....:......x..........xx..:....................x.:...x..:.:::..x:.:xx..:.x..:x..:.:xx:...:..:..:.x..xx..x.::.....:..::.---.x.x.:.....xx.:.:-----....x.:..-----:...x..-....::.-----::...xx.x:....:x.:...x:---------.:xx:x..:..x..:..x...--..::...x::..x...:.xxx....x..:--------...x..x::x....--------.....x.:.:::::.xx...xx.x:::x:.:.x...:...x------...x.x....--.:.x:....----...x..:.x....x.-------------------------:......-----.x::..:.xxx..x:x..x.::.:..xx.....:----..x.:.x.x.....::..:.---..:x.x...x:....:.------------------------..x.x..:..x:..:x:.:x...x..--------...xx.x..x.x:...xx........x.x.--:.:.x....:..xx.x.:...:.---------..x:..:...-----.x.x:..xx.....x:.::.xx:x:.....-------.:..:::....x.x:...-----------------------------.:..xx....--:..x.x....:.xx.x.x.xx:x...:.x::.---...x..x..xxx.......:....:...:.--.xx...xx........x:....x.............x....::.......x.....---..xx......:........:.....-.x.x.................-.....:.....................:...:...............x...............................:............................:......x..........................................:............::.:::..xx..x.....................::.....x:......::............:x.--...:..--------:x...x.::x....x...--x.....:xx:.x:..:.:x...-.:....:.:x.:.:...:..---:x:...---.::...x...:x.x..x.:..--------------...:x....:x.xx.:...::-..:.x:.:...x::..:.::.::.......xx::....-:..x:...x:.:.-x:.x:..x::.....x::.....:xx:.....:....................:..................................:-............x.:..:.:. 148M3I17M5I9M5I7M1D7M5I23M9D21M2D29M8D14M8D41M6I10M2I9M4D15M25I7M5I34M4I20M3I17M24D26M8I30M2D23M9I10M5D30M7I18M29I10M2I32M3I30M2D56M3D25M1D21M1I237M2D6M8D18M2D22M1D20M3D6M3D21M14I21M1D38M1I13M1D89M1D21M 886/1251 70.8% 1388/94230402 0.0% 228/1251 18.2% 116551635 73662920 +21682 chr4 + 190214555 150821698 150821697 150822216 519 ACCACTTCAGTCCCTAAGGATCCAGTTGAAAAGCCAAACCAGTCCTTGAACTTTATCAAGATAAATCCCTGGCATTCACTAATCATCAGAGAGGATCTTCAAATTAGATAAGAACAAGAATTTTGGCATGGGAATGAACACAAACACCTTTGCATTCACAAAGGCCCACAACCTGGCAGCCTTTCAGCAAGGTTTTATTCATGTAGCTGTTACTCTAAACTTTCCAGCTATTCCTTGGAAGTTGATAATACTTAAGATATGAGGAGAGTTGTGATTTCTGACATAGCATTCCTGAGATAAATACATGATCAGAGGGATGCTTTGAAATTCCCAAAGATATTCCACTAGCCCAAGGCAGCATGA----AAGTTTTTACAAAGGGGTCTCTAA---ATAAGAAAAAAAA--AGAGGGTAAAAAACAGAGCAGTTTCCTTGCCATCAGAGACT--GTTAAATGAATACTAGACATGTTAAATTCTACAGAACATCCTGGAAAATGCTACCATCAAAATTATCTGTTGTTTTCT chr4 + 94230402 34271730 34271729 34272248 34271730 34271729 34272248 519 ATTAATCCAGTCCCTGTGGATGCTGG-GAAAAGCCAATGCAAGTCTTGAACTTTATCATGATAAACCCTTGGCACCCACTAATCACAAGATTGTATCTTCACATAAGATAAGGGGAAGATTTTTGGCATGGGAATGAACACACTCACCTAGCTGTTTGCAAAGGCTCGGAACCTGGCAGCCTTTCAGTAAGGTTTCACTCACACAGCTGTTACTGTATACTCTCCAGCTATGGCTGGGAAGTTGATAATCCTTGAGATATGAGGAGAGTTTTGATTTCTGACACAGCATTCCTGAGATAAATGCAGGATCAGAGAGATACTTTGAAATTGCCAGAGACACCCCAGTGGTAAACTGTTACATGAGAACAACTTTTAACAAAGTGTTTTTTTGTTTTTAGGAAAAAAAGTTAAATGTTAACTCACAGAGC---TCATTCGCTATCAGACAATACATTATATTTAATCCAGACACAGAAAG------AGAGCATCCCAAAGCCTGTT-TTTCCAAACTTTCTTGATGTACTCT .::.x.:........:x....x.x.x-..........xx..:x:..............x......:..:.....::.........:x...xx.x.......x..x.......::x....x......................xx.....xxx::..::.......:.:x..................:.......:.:...:::..........x..x...:.........xx..x.............x...:................x............:..................:..x........:...:..........x...:...:.::...x.:.:xx.xx.:x:.....----..x....x......x.x.:.:.x:---x..:........:--.:.x.x...xxx.......---.:x:.:..:......x.x.--:...x..xx.xx.:.....::xx..:------...:.....:::.:xx..:.-::x:....x..x::..x...x:... 26M1D336M4I24M3I13M2I19M3D19M2I26M6D20M1D25M 376/508 74.0% 519/94230402 0.0% 22/508 4.3% 116549968 73664587 +3106 chr4 + 190214555 150825969 150825968 150826015 47 AAAAAACAAACAAACAAAAAAACAAAACAAAAAAAACTTGCACTTTT chr4 + 94230402 66953679 66953678 66953725 66953679 66953678 66953725 47 AAAAAACAAACAAACAAAAAAAAAAAGCAAAAAAACCCCAAACTTCT ......................x...:........x.:::x....:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 83872290 NA +19625 chr4 + 190214555 150828146 150828145 150828680 535 GAAACATACCAAAA---CGAAAAACTATTATCAGTACCTGTCAAAAGATCTGAACTGCACGGGTTGTTCCACAGATAGATCACCAAGGGCTCCAAGGCAGGCTGGTGGCAGAAGGGCAGGATCCACTGTGACTCCATCTGCTGGTATGTTAACCAAGCTTCGGAGAATGTCTTTCACATTGACGTTTTTTGAAACTGAAACTGACGGTGTAGCCTTAGTGTCCAAGTCATTTCCTCTATCATTTTTGGTTTCCGGAGACTTATTGACTTCTAAAGAAAGAGTAGATAGCACCTCGCTGATTGCATCTGGGCCTGCACTGACACCAGGAGGTGCTGTGTGAGGAGTTACTTCCACATGGCTTCCTAAACCAGTGGCTGTTTCTTCCCCAATGCCTGAGTCCCTCCTTCGAGCAGATGATGTGCTTTCAGATTCTTCCACTGATGCCGTAGTTAAAGTGCTGAATGCTGCTGGTGTGATTTCTATATCATACCCAGAAACACAAGAAATAAACAAACAAAAGTTTAGAACTAATTTTTAA chr4 + 94230402 34274032 34274031 34274554 34274032 34274031 34274554 523 GAAATAGATCAAAAATTTTAGAAGTTA----CATTACCTGTCAAAGGAATGGAACTGTACAGGTTGCTCAGCAGCTCCATCACCAAGAACTCCAAGAAAGGCTGGTGGCAGAAGAGCAGGATCAACTGCAGTCCCATCGGCTGGTGTGCTTACTAAGCTTCTCAGGATGTCCTTTACATTAACATTTTTTGCAGCTGGCACAGAAGCTGAAGGCTTACTGTCC---TCTGGTCCTGTCTCACCTCTGTCCTCCTGAGACTTATTTACTTCTAAGGACAGGGTGCAAAGTACTTCACTGACAGCATCTGGACCTGCACTGACGCTCGGAGCTCCTGCTTCAGCAACACCACCTGAACTGTTTCTTTGCTCTGAAGCTGGTTCCTCCCCAAGACCGGAGTCCCTTCTTTGTACAGATGCTGTACACTCTGAATCTTCAGTGGAAGCTGAAGTTAAAGCACCAAGAGCAGCAGATGGATGTTCCACATC-TGTTCA-AAGCAAAGTCAGGAAACAAA------TTTTAAGTTCATTATTAA ....:.x.:.....---:x.:..::..----..x...........:..x:x......:..:.....:..x:...x.xx.........::.......:x................:........x....:::::.....x......:..:.x..:.......xx..:.....:..:.....:..:.......x.:...:x..x..x.x..x..x....x.....---..xxx....x.x...::.:..x::...x..........x........:..x..:..:x.x..:..:..:....:x........:...........:.:x....x.x...:x.x..x.::xx.x:.::x.:x.:...:.x:x:.x.x:....x...:.......x:..x........:...:.x:......x...:.x:..x..x.....x::x..x..:.x........::.::.:x..x..x.:..x:xx...:.:...-.:::..-..:..x.:xx.:x.......------...x:.::.x...x.... 14M3I10M4D192M3D260M1D6M1D20M6D18M 359/520 69.0% 523/94230402 0.0% 18/520 3.5% 116554114 73660441 +8543 chr4 + 190214555 150831834 150831833 150831989 156 TCATTTTCACTGCCAGTTTCTGTACATGACTGGCTATG------------CCTTTCATTTTGGGGTTCCAAAATGTCTCTGTACTTGGAGACCATAAGAACAGAGATAAAGTATACTACTGCCAAGGCTAAAAATTGAGCTTGTTTGCTATCCTCCTGGGAAAAAAAA chr4 + 94230402 34275169 34275168 34275336 34275169 34275168 34275336 168 TTATTTTCATTCTCTGATTCCTTGAATGAGTGACTGTGGTTTGGTGGTCTTCTTTCATTCTGGGGTTCCAGAATATCTCTGTATTTTGAAACCATGAGTACAGAAATAAAATATACAACTGCCAAGGCCAAGAACTGAGCCTGTTTACTGTCCTCCTGTAGAAAAGGA .:.......:.x:.x.x...:x.:x....x..:..:..------------:........:..........:...:........:..x..:.....:..x.....:.....:.....x...........:..:..:.....:.....:..:........x::....::. 38M12I118M 120/156 76.9% 168/94230402 0.0% 12/156 7.7% 116556665 73657890 +3031 chr4 + 190214555 150841613 150841612 150841663 51 TTAGGTCATTTCCCTTTTTTTTTCTTTTTATTTTTTAAATTTTTTTATTTT chr4 + 94230402 87858560 87858559 87858610 87858560 87858559 87858610 51 TCAGGTGCTTTTCCTTTTCTTTTCTTTTTATTTTGTTCACTTTCTTATTTT .:....xx...:......:...............x.xx.:...:....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 62983053 NA +11513 chr4 + 190214555 150844091 150844090 150844827 737 GTAACTTACTATGTCTCTGAAAACAACTGCCCTAAGCCGATTAATATCCATGTCCTGTAGAAGCCTGTCAAGATCTCTTACTGGAGATATACCGCCAGTCACAATGTCCACTGGGCTCTATTTAAGATTAAAAAAAAATTGTATATATA----TATATT-CATATATACATTACACAGATATTCTTTAAAAATAAACACAGTATTCCCAGAACCAGAAAAGCAAAGCTATAGCATTCCTTTCCCCACTTTTTTTGTGTGTATGCTTCCTTCTTCTTTGAGGGGTTGGGGAGAGAGGTGGAGAAAGATGGCATGCAGGAAAAAATGACATATTTGAAGGAAAA-----GGCA--------TCACAGAAACAATCAAAGTAAACACTGGGAAAAGCAGAGAGGTTTAAATATAAACAAATCTTTATTGTGTATTTAAACACAAATATTTGAATGTTATATGCAGGCCTAAAGTAACTATTTTAATCTCTGCCAGATTTATTTAACT-----TTATGTTGAAATGAA---CAAATAAAAATCTTAATTGTAAAATAGGAGT--ATGCTTTTTGAAAATT------AATTAATCTGTATACTTACCTTCGCTGCAGATTTCCCTAAAGGAATAAGGCTATGCATTGGTTTCAAG------GCTTTATCTCCCCTAGTTTTCAGTTGTGAATGCTGTTGACACTCCAAGCAATTCCTTACTGCGACTGCACAAACTGTAATTTATTTTAAGGAAAAGATAGGGAAAGAAAAG-TTAATATTTA chr4 + 94230402 34277406 34277405 34278047 34277406 34277405 34278047 642 GTAACTCACTATATCTCTGAACACTACTGCTCGAAGTCTATTAATATCCATGTCCTGCAGAAGTCTGTCAAGGTCTCGTATTGGAGAAATTCCACCAGTCACAATGTCCACTGGGCTCTGT------TCAAAAAAAGATTCTGTTTTTAACAGCATTTTACAAAGAATCACTAAATGTGTACACTTTCCCTCTGGACATAATACTATCACAAGTAGGAACACAAAGAT-------------------------------------------------------------------------------------CAGATAGGCATTTTGTATTTAAAGGAAAAAATCTGGCAAACTCTTCTGACAGAATTATTT--------CACCGCGGAAGG---------TTAATTAT--GCAAATGTTAAATCTGCATCTTGGAAAAAACACTTCAGCATT---TCCAG--------------TGTTCATGCTCTTCAGATCAACTAAAGTATCAGTGGTGTGGTTGTGAATTTCAAAAACCATCCCTCTGCATAGAGTAATAATTACTGACTTTTG----TTTTCCTGGATTAGCTCTCATACTTGCCTTTGCTGCAGACTTTCCTGCTCCTATAAACCCCTGCACTGTTTTTTGGTTCTTTGCAATGTCTCCAATCGGCTTCATCTGTGCATGCTGCTGACACTCCAAGCAATTTCTTACTGCTATGGCACATACT-TAAAGGA----AAAAAAAAAATAGAAAAAAAAAAGCTTAAGAATTA ......:.....:........x..x.....:.x...:.x..................:.....:........:....x..:......x..x..:.........................:.------.:.......:...x.:.x.x..----:..x..-..x.x.xx..:..x.::x:..:x....xxxxx.::...:.:..:.x:..x..x:..:..x:.....x.-------------------------------------------------------------------------------------...:x.::x..xx::.....:........-----....--------.x......x:.x.:--------...:.x.:..:.---------....x...--:.....x..x.x.x..:..:.x::x.x...:.:..x.:::..---.x...--------------.x..x..x:::x:.....:x.:.x..x.-----.x:...x.xx:....---....x.xx.x:.:.xxx::..:.:..:x.:.--x..x:.....----..------:....::::x:......:....:........:..:...:xxxxx....:x.:x....:..x...:x:.------..xx.:.....xx.x.x:....x:....x......:.................:........x.:x.....x...-...xxx.----..::....:....::...:.....-....x.x... 121M6D22M4I6M1I68M85D29M5I4M8I14M8D12M9D8M2D42M3D5M14D28M5I15M3I31M2I10M4D2M6I68M6I75M1D7M4D24M1I10M 414/601 68.9% 642/94230402 0.0% 177/601 29.5% 116566685 73647870 +3074 chr4 + 190214555 150846398 150846397 150846472 75 GGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGATAGGGCAATTGCTTGAACCCGGAAGAAAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x......:.........::::........x:xx.xx..x::.........:....xxxx:..:..:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 74813195 NA +20747 chr4 + 190214555 150848804 150848803 150849584 781 TTTTAGCAGCTCACCTAGTCGGAGACACTGCCGCAAAATTCCTCCAGATGACATACTTTTTTCAGCTTCAATTTCAGTAAAGCCAAGAGAACTTGCAAATATAAGCACATCCACAAGGCTAATTAGCCTCTGCAAAAATGTCACAGAGGCTTCTATTGAAAGGCCTTGAGTAGGTTCAATATTTTCCAGTTCATGCTGTAAAGAATAAAGTT-----TGACATTTATATAT-----------ATATATTCTGAAAAAAAAATTTTACCAGATATAGTCCTAAAATTTATAAATTGC----ATAAGTAGTCAGACTTTCAGAAACCTAGTAACACAGAGTGATTTATACTTATTATTTCATCTAAAAAGGGTGGGGGATGAGGAGGAGCAACAGAACCATACAGGTGAA-ACATCATGAACCACATTCTTC----------------ACTAGCTGACTCATACTTAGGGAATCAACATTCTTTT--AAGTTCTTTCATTACTAGAACAGATTCTAAGGTCCTCTCAAGTAAAAGATCCTATTGTTTTTTATTTATAGCACCTACGATGCATAGTAACCACCACATTTAAGTTTTAGTCAATAAAGTTGCATAACACTCATGTTTTCACACCAATTTTCTATAGTAATT--AAGTCCTTACTGTAGCCGATGTAGCAGCTGAAAGCAATGGCAGTATACCCCCACAAGCCATGACCATATTGTCCATCACTTGAGAGATGAGATGAATTGTGTTGTGTACAAAGATGACATTATCACTGCTATTCACGAAGTCCATAACTGTCTTTGTTGAATGGCTGTCCAAA chr4 + 94230402 34279261 34279260 34279992 34279261 34279260 34279992 732 TTTTACTTGCTTACCCAGACGAAGACACTGTCGTAGAATTCCTCCAGATGACATATTTTTCTCAGACTCAATTTCAGTGAAGCCAAGAGAGCTTGCGAAAACTAACACGTCTACAAGGTTAATTAATCTCTGGAGAAATGTTAAAGAAGCTTCTACCGAAAGTCCTTGAGTTGCCTCAATGTTTTCCAATTCATGCTACACAAAGAAAAATTCAAAGTAACATTTACTTCTTGACAAAGATGATACTTTGTACAAATCAAATGAAGAAAAACGTAGGCTGGAAGTCCATCTTCAGCCACAAAAATTAATGATTGTTCCTAGAATATGATTAC-TATTGAGATTGA--------ACTTTGTTCCAGACCTCTGTGGGATGATGCAGCTAAGC-GATCTCTTCAGGCAAAGAGGGCAGGCACCCTATTTATCTTTGAGAAAACGTGGAAGTAGCTAA---------AGGGAGGAAAGATGCTTGTGGAAATATTCCCCTT----------------------TCCCAAAGAACAGG-----------------TATAATATTTAATATGC-------------TATATA----------AAGGAAG--GCATACTCCCCAAG-------AGAAATATTCAAATAAAATTGAAATCTCTTACAGTAGCAGACGTGGCAGCAGAAAGCAGTGGCAATATGCCACCACAAGCCATGATCATGTTGTCCATCACTTGAGAGATGAGGTGAATTGTATTGTGTACAAATATGATATTGTCACTGCTATTCACAAAGTCCATTACAGTTTTTGTAGAATGACTGTCCAAA .....x:x...:...:..x..:........:..:.:...................:....:....x:...........:...........:.....:..x.:x.:...:..:......:......::.....x.:......:.x...:.......::.....x........x.x:.....:.......:........::.x.:.:x...:..-----.:.......:x.x.-----------...:x..x.:x...xx....xxx:xx.:.::...x.:x:..:.::..xxx:x..----.x..x..:.x.xxx..:.x::..:x.::.x..-:.xx.x....x.--------.:..::.::x.:.xxxx..x.......x.x:.xxx.:.-..x.:x.x....::..-.x:x..x.x...x:...:x..----------------.x.....:.---------.....:xx..x..x...x.--..:.x:.::.x..----------------------..:...:x..x..:-----------------....::.::..xx....-------------:..x..----------..x:...--.....x:x.:..x.-------.xx...x...x.xx:x....--..x::.....x.....x..:..:.....x.......:.....:...:..x.............:...:.......................:........:...........x....:...:..............:........x..x..:.....x.....:......... 212M5I14M11I54M4I32M1D12M8D38M1D16M1I21M16I9M9D19M2I13M22D14M17D17M13D6M10D7M2D14M7D20M2I173M 491/691 71.1% 732/94230402 0.0% 131/691 19.0% 116569543 73645012 +12213 chr4 + 190214555 150850709 150850708 150852958 2250 AACATATAGACAAACCTTCTCCACATCTGTATATCTGTTTCTATTGAAAATAATAGATCAGTGAGCAAACGTTGATGCATCTGAGACCAGTTGAACTCAGGAATACGAAACACAGTAGATCTGGAATCCCTCCTTTGTCCATTAACTGCATCTGGTGCTATTCCTTGCCCTGGCTGCTCATGTTGCCTTGATATCT-AATACAGAAATTTAAAAAGTAATAAAATAGGTTCAACTTCAGCAGGAGGCTTTAGCAAAGT-----AAATAATTTAG----TAGCTTCTATGCAATTCATCTAACACGTTTTTAAGACACTATAAGAACCAAATTAGAGAAAGAAAAATTATCAATGAGTAATAAC--ATTAACATTTTAGTACA-------------------------TGTAAGCA-AAGCTATCAAAAGTGCAAAACTACCACAATTTAAAAGTAATTAACTTGGAACCATG-----------TTAAGTATTACCACTATGTAGCATTTTATAAAAGAATCAAGTAACAGTTCTTAGTTTTTAGCCTTAGCCTAAAAGAAAGGCAGTATTTAGAATCTAAGTGGCATTTGGATTATGAAGTGGCTAGAATGAAGAATAAAAACAGAGATAACATAATGAAGAACCAACCAACAAAAACAAAAAAAAGGAGGGTGGGACAG---AGGATAAGAATTGAAT-AAAGTGGAAAATGACAACATGCTACCAAGCACTGTCTCATGGG---TCACTCTGAGATATGGACAGAGGAGAAGGCTGTGCCTCTAGA--------------------TCTCACAAAGCCTCCTC----TCTCTTATAGACTTCATAATACAATTTTAAATCACA----------TGCTTAGTAACTAAAATTA-TACACTGGCAGGTAGGTAGCCCTAGAGTTTGTTGGAAAACTAATGTACTAGGATTGGGTTAGTCAAATAAAAGGTAAAATGCAAGTGTTTCCAATATTTGTTTTATAAACTAAAATT---ATACCAATCCTTCAAAGTGGTAACTTCTGGTGATACTATGGTAAAAATAGTAATAAAAACTGTCATTTAATGAACTCACATTAACTGCCAAACACT------------GTGCTAATGATCTGAAATAC-----------------AATCTTCAC---------ATTCATTGCATTTATTTAGTTGTGAATAGCA---TGTGAAC-----------------CAAATTCAAAATAAAATAAAATTTAAGTATATACACTTG----CTCTTTTTTAACTCAGTGCAAAAGTACTTGAA---TAAGA---------------------CAATATATAAAA------------TCACCTCAAGCACATGTCGATGAGGTTGAGGTGCTTCCACGTTGGGACTGGCCTTCAACTCCAGCCTCTCAGTATCTGTAGCAACATTGGAAACATCCAACTTCGCAATCTTTTGCTCAGAAGA------AGCCTCAGAGACACTACCATGACAATCATTAATTAATTTGGTTTCTCTAGTGAGGTTAGTTGCTTTCTTCC-----CTTCCTCCAGCATCTGACCAAGGTCTGATT--CTACAGCTATTTGGGAAACAGTAGTTTCTGGTGACATAGCTGAAGACCCTGATGCTGTCATAGTCTGAATTCCAGAATCTTTAGAATCTTGAGTTTCAGTATCAGTTTGCTTTTCAGTAACAGGTTTTCCTTCTTGAAATATTAATTTGTCATCATTACCAAACATGTCCAGTTTTTCACCGGCTTCAGATGCAGCTGGAGACAAACTGTTATCTTGGAGCTCTGTGGGTAGATTAGCTTCCTCAGTAGGACTGCCTTCTACTTTCAGTTCCACATAATCATCATCTTCCTCTTCCTCTACTATAGATTTATCCAAGAATTCTGGCATCTCTGAGGCATCCTCTTCTGAAG---------------GAGAACTTATAGAAGCAGTTAC---TTCACTGACAGTCATTGAATCTTTGCCAGTTGTTATAAAAGAATTAGAGGAAATAGCCACAGCTTCTATTATGTCAGAAGATACTTCTAAATCATCTGCATTCCTTGTCTC---ATTTGTCAGTGTTTCTTCCAAAGTGCCTTCATCTGGTAACTCCTGATTTTCTTGCTCAGCTTTCATTTCTTCATA---------------------AGATGTATTAGTAGTTTGCAGTTCAATATTAGATGCAGATTCTAGTGAACTTGTCTTCTCTATACTTGAATTTTCATTACCATTTGTGGTGAAATGAGGACAGACAGGAGAATCCTTCGTATCTGGTTGCTGGGATCCTACTGAAACATTAATATCCCTTCTAATGCCAGAGGCTGCTTGAACTGAAGTTGAAGAACACAGCCCTATTTCTTCATCAACTTTTCCTTGCTGTTCCCTAAATATATTGGCAAGGTTTTCTTTGTGTATTTCAAAAGTGACCTAGGTGAAAAATGT chr4 + 94230402 34280555 34280554 34282805 34280555 34280554 34282805 2251 AAAACACAAATTTACCTTCTCCACATCTGTATATCTGTTTCAATGGAAAAGAGCAAGTCTGTAAGCAAGCGCTGATGCATCAGTGACCACTTAAACTCAGGAATACGAAACACAGTTGATCTAGAGTCTCTTCTCTGCCCATCTGATGTAGCAGA---TAGCTCTTGTCCTGAAGAATCTTGCTGCCTTGACATCTGAAAACACAATTTTTAGA--CAAAAAAATACCCACATATTTGATTATTGGTTTCCATGGAATACTGAAAGGCATTCAGTGTTTAGATATTGCACAAGT----GTAGACTTTGCACAGTTACAAATAAAGCTAAAACTAATACACAAAAGCTATTTATTGAATACAACAAACCTACATACTAGTCTACAGCTGCACTACACCACCTTGTCAGTCTAAGCATACACAAGCAGCAACTCAACCTTACCACAGGAGGAGTATATGTTGCTGTAGAGAGTGTTTTTCCTCCTTTAAGGAAGA--ATGGTGCAGAAT----GAAGAGCATCCATTAACAGGTAT-----------CTCTGC-----AGAACGGAAGTACTCAGA---TGCATGACTATTTAACCATGAAAAGCTGAGAAAGAA-ACTAAAAACTAGAGCATTGGAGCATAGCAGTACACAACAGAA------------------GACCAGTTTAAAATTATACTTGCACAAAAACATAAGCTGACACGATG----GAGGCATAACTCCGTAAAATTTTAGTTTCAAAAATATATAG----------TGTGCCTGCAGAGAACCAAGAGTAAAAAATATTTTCAC-AAGTTCCATCAGGATGTCATACAAATTTAGTGGTATTTTTTCTGCACAAACAATGTTTGCTACTCAATAATTCAATTAGTTACAATTACAAG-----AGATC---AGATTGATAAGAGAATAA--------------GTGAGTTAAGAAGCAGAAGAAATGCTAG-------------------ATGAAGTCAAATCAGAATATAAATATTT-----------CTTTCAGTTCTTCAGCATTAAGAATGGAAGTACTGACAG-----AAATGAA-GGATATAACTAGCCAAGTACTCAGTCTCTGTCAGCATCCATAAGTGGATATACAAAGAATAGAAGCTTAGAAACTTCACAGCACACAAATTTGTAAGAATTATGGCTATTTTAATAGAAGTCTGAGAGCGTTCTTTAGGTAACTGGCAAAACCCAGATACATTAAAACCCCCATA-ATGTGCGTGGGCACCCTTTGTT----------GAAAATACTAGCAAGCTAAGAGTCTTCTTTTATTTTTAAGCTAAGCATATAAAGGACAGATAGACCTTACCTCAGGTAGGGTTTTGGGGGGCAGAGGTGCTTCTAGACATGTATTGGCTTTCAGTTCCAGTCTTTCTGTATCAGATGCAACACTAGAAACATCAAGCCTGGCAATTCTTTTTTCAGAGGATCCTGCATGCTCTGGTACATGTGCATTGGAATCTTCAGCTGTTCCGGTTTCACTA-TAAAGCACCTTTTTTTCCTCCAGCTTCTTTTTCC--CTTCTGAATTTGGT-TGATTCACTACTTCAGCTGCAGAACTGACTGTTTCTGATAA---AGCC--AGTTCTTTGTTTTGCC-CATTCATGCCTTCAGTATCTTCAGATTTTAAAAGCACAGATTCAAGTTGCTGTT--GTATTGCCTTTTCCTCCTTTGTTTCTTGATTT-TCATTAGAACTA---------TGCTTTCCTTCTGCTTCTG-------------CAAACTCT-----------TCTGAAGGTAAA--GGCAT----------ACTACTTTCCTCTTTCAAATCAACAAAGTCATCTTCATCTTCCACTTCCACTGCTGATCTTTCCATTCCTCCTGGACTTTCATGAGTTTCTCCTTCCAAAGAAGTTTCCATTACCAAAGAAGCTGCAGTAACAGCAACCGTTTCCTCCACAAGCTCTTGAGCTTTGC---------TAAGAGAAT---------CTTCAATTGCTTCAGCTATTCCACTACTAATTTCTGAAACACTGGGTTTTATTGCTTCTGGCTCTGTAGAAAGTTCTGAACAAGGCACTACGTTTAG------------ATCTTGCGCAGTTTCCCTGTCCTCATCCTTTAAGTCCTTCCCTTGCTTAGAGTCTGAAGGAGTTTGCTGGTCACCATCTGA--CTGAT-------------TTTTTTCAGTACCGGACTCCACATCACCATGGATGG------GAGGAGCAGTAGCAGCTTCTTTTAATTCCAAACACTGCTTCTTTTCCACAATTTCAGCTCCTTTGCCAACTCCAGAAATTGTTCTAATCGGAGCTGAAGGACATGTCACACACCCTTCGCCTCCCTTTCCCTGGTATTCCCTGTACATTTCAGAAAGACTCTCTTTGTGCATTTCAAAGGTTACCTAGAAGAACAGAGT ..x.:.:.:.:xx............................x..x.....x.::.::..x..:.....:..:.........x.x.....x..:.......................x.....:..:..:..:..:..:....:x:x..:.x.x.:---..x::....:....:xx:x..x..:........:....-..x...x..x...x.:.--:..x......xx:x..xx..::::x:xx..:..:x::::.:.-----..:xx...:..----...x.x:.:::...x.----xx.x..x..x:xx..x:..x.xx.:.:.:...x:x:.x.x.x....::...:x..x::xx.:...--.::x....x:....x:.-------------------------.x......-.x:.x.x..:x.::x...xx:.......:xxx:.:x:..xx.x:..xx::.xx:..-----------.....x.xx.--.:x:..:..x..----x..:..x...x.x......x.x.-----------..:x..-----....x..x....:.:...---.:x:..:.xx..x:.::.....:x.x:x....x...-.x.......x:::::.x::x.:::x..x.x:.xx.....:..------------------.:x...---.::..x.x.x...x.:-...:::x..:x.....xx...----x.:...:x::::.:.:::---.:.x.:.x.:.x..:x.:..----------.......x:...--------------------.:....-...:::.x..----.x..x..:.:.:..x:.::..:xx...:x:xx..x.----------.:..:.:...:.x..x.x:-....x.x:..:.-----..x:.---..x...x.:::.:.x...--------------..x...:..:x.:x..:x:......x..-------------------..:..x.x....:---...:x...x:..-----------...:::..xx.x.x:::x...:...:.x.:..xx:..x.-----x......-xx.:..x.x:x.....::...------------.::::x..:.x:x..x....-----------------..x......---------...::.x:x.x....xxxxx.x.x.....x.---..x..:.-----------------....x:.x.:...x.x.....:::xx:..-..:::.x..----.:....x..----------:...:....x.x.---.....---------------------x.::.......:------------.:......:.:.x:xx.:x:x.:..:x..........:.x::xx.x.:....:....::.....:..:..x.....x.xx......:.:........x.:.:.x.....::...x:.....:..------.xx...x.:x...:xxx...x:x....x.:.::.:x.::......x...-.:.:.:xxx..x:....:...-----...::...--.x.....x:xx...-.....--....xx.x::.xx:...x::::x.......:.:.---...:--..x:.:.x:.x:..:.-:.x..xx:x:.:...x.....:...x.:.x:.:x:x...xx...:x.....x..--...x::xx.......:...x:xx.x..:....-....:.xx..:.---------x.:...:.x:.x.....x.-------------......x.-----------....x:....:.--:..x.----------...:.:...:x......:x..x...x.:.....x..x..:..:x.:..:...::x...:.x....xxxx.:....xx.:..xx::.:x..::....::...---------------:....x:.::..x.:...:x..---...x::x...:x.x:.x:.x......---------...:.....---------:xx.x.:x.....x::...x:..xx.xxx.:....:..x..::x.xx..:x...::..---x.:...x::x:x....xxxx...xxx..x.:.:.:.------------x......x...:..:.x.x..:....x---------------------...xx:xxx..x.......x.x...x:..:x..--.x...-------------.:..:..x:...:x..x.::x...:.....xx:...------.....xx:::..x..xx..:..::xx..:::x::...xxx:::.x.::x..:x.:.::x:.::.x.:..:x.....:::..:.:x..::.:..:.....:...::x.x.xxx::....::.xx.:.....:..x.:......:x.:..x.::.x...::.:........:........:..x......:x...x.:x.. 155M3D38M1I17M2D42M5I11M4I16M4D65M2I17M25I8M1I56M11I10M2D12M4D23M11D6M5D18M3D36M1D42M18D6M3I16M1I21M4D18M3I20M10D12M20I6M1D10M4I36M10I19M1I12M5D5M3D18M14D28M19D13M3I12M11D39M5D7M1D21M12I20M17I9M9I31M3I7M17I29M1D9M4I9M10D13M3I5M21I12M12I124M6I49M1D21M5I8M2D14M1D5M2I34M3D4M2D16M1D54M2D32M1D12M9D19M13D8M11D12M2D5M10D101M15I22M3I26M9D9M9D58M3I36M12D27M21I33M2D5M13D36M6D199M 1214/2004 60.6% 2251/94230402 0.0% 493/2004 24.6% 116570154 73644401 +15070 chr4 + 190214555 150856696 150856695 150857008 313 TGTTTTCCTTAAGATATTTGTGACTTTAAAACTGATAATTTCCAATTAATTGCCAGATATTGTTCTAAATTACCCAGCTAAAAGACTAGTCATTAATCTTCACAATCATTTGATAGCTAATCTATAGCTGTTTGTAATGTTTGGAAAGCACTTCTATAAACTACTAGTTAAAGATACTTGTGAGCTAATGACTATAACATTT-CTTTTGCCATTATTTTCAACTTAA-TTGGCACTCAA-ATTTACTAATTAGTA--GATAAAAGATAA-ACACAATACATCCAGATGTTAATATTATCTTTTTAATCTATACATTAAA chr4 + 94230402 34286664 34286663 34286977 34286664 34286663 34286977 314 TATTTTCCTTAAGGCATTTGCAACTGTAAAGCTGATAATACAAAATTAATTACTAGAAATTGTTCTAAATTGGTGAGCTAAAAGGCCAATCATTAATCTTCACCATCATTTGATGGGTAATCCATAGCTGTTTGCAATGCTTGGAATGCAACTCTACGCACTACTAGCTAAAGACACTTGTGAGCTAATAACTGCAACATTTGCCTCCACCATCAATTTTAACTTAATTTGACATCCAACATTTACTAATTGGCAAGGAGAAAAATTAGCATACAGCAAGGAAAAAGGTTAAGATGA-----TTGACATTTGCATTAAA .:...........::.....::...x....:........x:xx........:.:...x.............:x:x.........:.:.:..............x..........:.x.....:...........:....:......x...x:....::x........:......:..............:...::.......-.:.:::....:.x...:.......-...:..::...-...........:.:.--..x....:x..:-.:...::.x:xxx.:.x.....x..x.-----..:.:x.x.:....... 202M1I24M1I11M1I15M2I12M1I27M5D17M 237/308 76.9% 314/94230402 0.0% 11/308 3.6% 116570032 73644523 +3087 chr4 + 190214555 150858349 150858348 150858409 61 GAAGCACAGCAACAGTCTGTCTCTCTCTCTTTTTCTTTTTTTTTTTTAAGTGCCATTTAAA chr4 + 94230402 9863227 9863226 9863286 9863227 9863226 9863286 60 GAAGC-CAACAGCAGTTTCTCTCTCTCTCTTTTTTTTTCTTTTTCCAGAGTAACACTAAAA .....-..:..:....:.x...............:...:.....::x:...:x..:.x... 5M1D55M 46/60 76.7% 60/94230402 0.0% 1/60 1.7% 140995122 49219433 +22146 chr4 + 190214555 150859362 150859361 150859991 630 TAGTTTAAATGCCTTAATTTAAATTTTAATTAATGAGTAAAAGC----ATTTTATCATACCAAGTGAAAAAAAGTATTACTT-AAGCACAGAAAAATGTTCAATTTGAAGCCAAAAACAAACAAAAAAAAATGAAAACCTAGACAACAAATAAGACAATGAAATCACAAACGTTACTAGGTGCACTCTTTAAAACCCTGAGATCAAAGTAACCAACATAGTGCAGTTATACTAGAAGAGCCTATTACTGCTTATAAAACCCAGTTCAGCTGCTGGAGGAGAGGCATATAGTGACAAACAGCTTCCCTGCTACAAAGGTGGCAGGAAATCTATCAAACTGGACAATAAAACTGCAATTGAGTTTCTTTGGCTTTTTATAGCAGCAGCATGTATCCTGA--TGTAACTCTGCAAAAGCTATCCAATTCTGCAACATTAGTTCTTTACACATCAGTTCTTTATCA-AGAACCATGTTATAAATTTGGGATATTGAGATTCAAAATGACTGCAAAAAGGAAAAAGCATCACTTTAACACTGTATGTATAAAAGTATTATAAAATCTTCAGAAC---------TTATATTTTTAGA------GAAAAGAAAATTTTGTTCCAATAATTCCAGTGGAATTTTTAATAGCTGCTAAAAAT chr4 + 94230402 34290354 34290353 34290977 34290354 34290353 34290977 624 taatttaatttttttcattaacatttttattaa--aCTAGAAGTCACAAATGGAAAATATTGTATGCAACATGTTAATATTTGAAAAACAGCAGAATATATAGT------ACAAAAATCAGTAAGAAAAAT---GAACGAAGTTAAGAAATTCGGCT------TTAAAAAGGTTAC---ACACAC-CTTTTAAATTCTGAGTGCAAGGAAACCAATGTAGTGCAATTATGCTAGAAAAGCC-GTTGCTGCTTATAAAACGTTGTGCAGCTGTTGGAGGAGAGGGTTACAGTGACAAACAGCTTCCCTGCTACAAAGGTGGCAGGAAATCTATCAAACTGGACAATAAAATTGCAATTGAGTTTCTTTGGCTTTTTATAGCAGCTGCATGTATCTTGATGTGTAGCTCTGCAAAACCTATCCAATTCTGTAATACTATTCCTTTATACACTAGTTCTTTATCATAGAATGGTGTTATAAATTAGTGGTAGGAAAGGAGCAAAGGGTTGTAAAAAGAAAAAATAAGCA--GTAACCCAATACAATTAGAG-----ATGAAATAATAAAAACACAAACTGGTTATTCTCTTAGCAGTGTTAAGGAAATATTTTTGTTCCCATAATTCCTACAATACTTTGAAAGCATACTAGAAAT ..:.....x.x::..x...x.x.....x.....--.x..:...:----.x.xx.xx...:::x:..x..x.x:x..x..:..-..:x....x.:...:.x:.:.------x......:x.::..:.....x---:...xx..x:..x....xx.:.x------.:.x...x.....---:::...-....x...::.....xx...:.x......::.......:....:......:....-:..:.............x:x..x......:...........xx..:.............................................................:.................................x.........:...--....:..........x.............:..:.:..x.:.....:...::............-....:x:...........x.x.:..xx:.::xxxx...x.::..:......:.....xx.x..--x....x.x:..::xx..:.:-----..:....xx.x.:...---------....x:.:....x------:.::.:.x.x.........x........x::::x.:...x..x:xx.:...:.... 33M2D9M4I34M1I21M6D21M3D23M6D13M3D6M1D55M1D155M2I63M1I63M2D20M5D16M9I13M6I56M 443/601 73.7% 624/94230402 0.0% 52/601 8.7% 116569008 73645547 +3914 chr4 + 190214555 150861809 150861808 150861923 115 TGTACAGTTGTAAAAAGATATTTTCTGACAGGCACAGTGGCTCACAACTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033174 76033173 76033277 76033174 76033173 76033277 104 TGTAATGTCATGAAAGGATG---------ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....xx..::.:...:...:---------.x:........:x...:--....:.:...........::........x.x..x...x::........::.:..x.xx:..:..:.. 20M9D17M2D67M 73/104 70.2% 104/94230402 0.0% 11/104 10.6% 74828635 NA +3005 chr4 + 190214555 150867063 150867062 150867144 82 AAAAGAATTTAAGCTATATATAAATAACTAAACTTACTTTGGCTTAATTTAAAAAAAAAAAAAAAAAAAAACTACATTCTTC chr4 + 94230402 6899143 6899142 6899224 6899143 6899142 6899224 82 AAAGGTAATTTATCTATATAAAAGCAGCTGAACTTACTACTGGGAAAAAAAAAGAAAAAAGAAATAAAAAGGTGCATTTTTC ...:.x.x..x.x.......x..::.:..:........x:x.xxx..xxx...:......:...x.....:x.:....:... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 143967920 46246635 +21271 chr4 + 190214555 150867601 150867600 150868390 790 TTTAAATGACTAAAATTCAAAAATTATAGATATTTAAAATGCTACAATACGCTTTCATAAAGAAACTTACCTTTGAATGAGTGATTGATAAAGTGTCTACCCATACACGCCAGCCACCCCACTCATATTTGACTGCATGGTAAAGCAGGATTCTGAATATGGCGTATACCATTTCTGTTATCTTTTGCTCATCTGAATTCTTAGGATTAAAATAGCAGAGAGAAAGCATCCATTCTTGCCACACAGAGCATTGTAGCAAGCTCCTGAAAATTATGAGAGGGTACTAAATTACTGAAGAAAA----AAAAATTATCTAAAATAAATCTAAAGGTTTAAAACAAAATAACCCTGCCCCTCCCTTTCCCCCCGAAAAAG-----AAACACATTTAGTTATACATTAAGAACAATTCGACAATGTGGTACTAAAAATTCTAACTTAACTATGTGGTACATTATTTACATACTCTTAATAAAAAAAATAGAAAAATCATTTCACAGTATTTTTAAAGCAATTTTTCTTAGATAAAATGGGCTTATACAAAAGTACATTTGAATACTGCAAATAAATGCTTTCTGATTCAGCTTACCTCCTGTTTTCTCTACTGTTATTAAAAAGTTTAATCATGTCAGAAAGAAAGGCTCTGCGAACCTCCATGCTCTCTGGGCACTGGGGAGAATTTCGAAGTAGGGTCGCAATTACTTTTAGTATCTCTGTAAGACAGTTTATAAATAAGTAAAAACCAAACTCAACAAAAAACT----CATGATAGAAGGTCATCCATCTATTGCAATTTCTTTA chr4 + 94230402 34293479 34293478 34294181 34293479 34293478 34294181 703 TTTAAGGCTCCAAAATTCA----TTACATAGCATAAAAAAGCTCCCA---------ATTTAAACACTTACCTTTGAATGTGTGATAGACAGTGTATCCACCCAAACACGCCAGCCACCCCACTCATACTTGATAGCATGGTAAAGCAAAATTCGAAAAATGGTATACACCATCTCAGTTATCTTCTGCTCCTCAGAAGTCTTGGGATTAAAACAGCAAAGAGAAAGCATCCACTCCTGCCAAACGGAGCATTGCAACAAACTCCTGCAAAATA-----------CACACTATTTAATAAAATTTCAAAATATGTCTTAGAAATACACATCCATCCAGAAAGGAGTA-------CGACATCTCTCAACCTGCAGCAGCATGCAAGATTCTCTAATTTTACAT--------ATCCAAGACTATATTAC---AGATTTT-GCTGAACAGTG-----------------ATGCTTAATGAGACTAACAAGAACACCTTGTTATGTTCTTTGTGCTGCTTATTTGCATACATA---------TATGCATAAGG-----------------------------TAAGCCATCTTACCTCCTATTTTCTCTGCTGTTATTAAAAAGTTTAATCATATCTGAGAGAAAGGCTCGACGAATCTCCAATGTTTCTGGAGTCTGTGGAGAATTACGAAGCAGGATTGCAATAACCTTCAAAATCTCTGTAAAACAGTCAACAAACAAGAAAATATTAGGACCAAGCAAAGATTAAGACACCTTCAAATATCATC--TTTATGGTGATTACTTCA .....:xxx.:........----...:.x.xxx.x....x...x.x.---------..xx.:.x...............x.....x..:.:x..:..:.....x.......................:....:x.............::....x:..x....::..:.....:..x........:.....x..x...x....:.........:....:..............:..:.....x..:........:.:...:......x...x..-----------:.x.:..:.x..x....----....xx.:...x.:.x.x.:x:.xxx:.::.:..x::.:..-------.xx:x:..:..xx..:.x.:x..-----..:xx:x.:..:..x.....--------..:.:.x.x.:.:x...---.:...:.-:..x...x:..-----------------.:x......:.:.xx..:.::..x.:.x.x.:.::x.x...x.:xx..xxx...x.x..x...---------...:..x...x-----------------------------.:.x:..x..........:........:.......................:..x..:..........x:....:.....xxx.:.....:xx...x........x.....:...:.:.....x..:..:.:x..........:.....:x.:...:...x...x.::.::x:...xx...:.:.----..:xx.x:..x:.....--.:...x.::...x...:. 19M4D24M9D217M11D17M4I41M7D23M5I20M8D17M3D7M1D11M17D63M9D11M29D185M4I17M2D18M 485/690 70.3% 703/94230402 0.0% 113/690 16.4% 116574122 73640433 +3522 chr4 + 190214555 150868807 150868806 150868880 74 GTGTGCCTGTAATCCCAGCTACTCAGGAGGGTGAGACAGGTGAATCGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:.........::::...x....x.xx.....x.:...........:..x:xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 74835603 NA +9313 chr4 + 190214555 150870133 150870132 150870638 506 AAACAATAAAGAAGACATATTGTTC-TATTCCAAATTTGGTATTTTTATATTCACAGTAATTTAAGATAAAA-CTACCCCAATGGTTCTTGTAATTCTGCCTGACATCACTAAATAGCACAATCAAAATTTTGCTGAAAGTCTGAACATATATTACATCAAGACCTT--AAGCAAACAATTCTTCAAAACCTTTATATAAGAATTTCCACATAACTTAAGGTTG---------------ATTCGAAGGAATACTCAA------TATAAAACCCAAACAAAACTAGTAT----AATATCATCACCCTTAATGAAACATTCATCTA--ACAATCTGTTTC--AACAACATCA-ATTTTAGGTTGTTCACAGTGA-----------CTTTCTTTTTAAGT-----AGCAAAAGGTAGTTTTTGTTA-------------AAGTATATAAAATACATACGAGGGTTTTGTATCTTCACTGAAGAATCAGGATCTGGATGCTGTTTATGTATCACCTGAGTACCAATCTGTTCTATAAGAATCTACAGAAGTAAAACAATGGA--TTACATTAGCA chr4 + 94230402 34295338 34295337 34295895 34295338 34295337 34295895 558 AAACAGTGA-GCAGATACACTTCTCGTACTTTCCATCCAACACCATTGGACTGAAGGTAATTTAAAATGAAGGCTGCTTCCATATTTCAGGTAATTTAGTCTGGCATCACTAAATAACGCAATCAGAATTGTGCTGGA-GCCTTAACATGTATTAAATCAAAGCATTCCACGCATACAAGTATTGAAAATCCACTTCATAACATGACTGCACAGCCAAAAATGGTGAGTTATGAACTACATACATATTTATACTCAAACGTCTTTTGAAAAACTGAAGAGACTTGCTTCCTAAGTAACTCCACC-TAAGTGGAGTTTTCTTGTATGAAATACTACTTAGAAATGAGATGGGAATTAAGACTGGTTACAGTAATGAATAAGCAACTCTCTCCTTCCCTCTCCTAGCAGA------CTTTTATTATGGTACCACTGAAAAATATTTATCATTCTTACGAGGATTTTGTATCTTCACAGTTGAATCTGGGTCAGGATGTTGTTTATGTATCACTTGAGTACAAATCTGTTCAGTCAGAATCTAGAG----AGAAGAATAGACGTCATATCAACA .....:.:.-.x...:.:.:.x:..-..:.::xx..:::::.::x..:x.:.x.x:.........:..:..:-..:.::.x..:x...xx......:x.:...:............:.:......:....x.....:.-.:..x.....:.....x.....::.x..--.x...x....x.x..x....:.:x:x.xxx.:x..xx.::..:.:.:x..::.x.---------------..x.:x.xxx........------.x.:...xx.x:.x:.:...x.:x.----.:..x.x:....-.x.:..:.::x...x.x..--.x.xx..::..x--..::.x..x:-.x..x..::..x.:.....:.-----------..:...::..xxx.-----....:.------:....:...-------------..:...x..xx..x.x.......:..............x.xx.....x..:..x.....:..............:.......x.........x:.x........x..----.:..x...:..--.:.:..:.:.. 9M1D15M1I46M1I65M1D28M2I55M15I18M6I25M4I12M1D19M2I12M2I10M1I21M11I14M5I6M6D9M13I107M4D11M2I11M 329/493 66.7% 558/94230402 0.0% 78/493 15.8% 116574795 73639760 +3834 chr4 + 190214555 150871112 150871111 150871185 74 GTGCACCTGTAATCCCAGCTACTGGGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........x.::........x.xx.x...x...........:.:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 74837908 NA +9613 chr4 + 190214555 150871292 150871291 150871472 181 AGGCATTTTTATAATAAGA----------AATTTAGAGGAGTAAATCCTAA-----GTACATTCCTACCTCAAACAGCACATTATATGTGGTCATTGTGATTAAATTTGTCTGAAGCATGAGCCTTTCAGCTAGCAATGAAAACAATCCATGTCCAAGCATGACTTCTGCTTTCCTCCTGCAATTACACAAAAAGA chr4 + 94230402 34296151 34296150 34296346 34296151 34296150 34296346 196 AAGCAATTTTCTAACAATGTCTTACAATCAATTAGAAAGATGTAATCCTAACTAAAGTATGTTACTACCTCAAATAAGACATTGTACGTGGTCATGGTGATCAAATTTGTATGAAGCATCAGCCTTTCAGCCAGCAGAGAAAACAATCCATGCCCAAGCATGATTTCAGCTTTCCTCCTAAAACAGTACAGAAAGA .:...x....x...:..x:----------....x::.:..xxx........-----...::..x..........:.:x.....:..:........x.....:........x........x...........:....:x..............:..........:...x...........:x..:x::...:..... 19M10I22M5I140M 143/181 79.0% 196/94230402 0.0% 15/181 8.3% 116575141 73639414 +7710 chr4 + 190214555 150872656 150872655 150872778 123 TACTTACTTTGGGGCCAGATGTTTTAAAAAATAACCCATTGCCTTAAGAGCTTGTACCCTGATTCCTTCACTTTTCGATGCCAGAAGTTTGTAGATAACACTGAATGAATAAAAATTTAAAAC chr4 + 94230402 34297456 34297455 34297578 34297456 34297455 34297578 123 TACTTACTTTGGAGCAAGATGCTTTAAGAAATATCCCATCACTTTCAGAGCTTGCACCCTGATGCCTTCACTTTTTGATGCTAAAAGTTTGTAGACGACCCTAAGTAGAAAAAAACACAAAGC ............:..x.....:.....:.....x.....::.:..x........:........x...........:.....:.:...........::..x..:.:.::.x.....:x:...:. 123M 97/123 78.9% 123/94230402 0.0% 0/123 0.0% 116575200 73639355 +8268 chr4 + 190214555 150893041 150893040 150893181 141 AAAACT---CTTACCGTAACCCATTCCTTTGGTCAAAAGCAGGAATCATAGAGTTAGGGTGTTCTGACATTAATGCAACAAGCAGCTGTAGGACATCCATTAGATTGTCATCCT-----ATAATCATTTTAGAAATTTTTTTTAAAAAA chr4 + 94230402 34300074 34300073 34300220 34300074 34300073 34300220 147 AAAACTTCACTTACTGTAATCCATTCCTCTGATCAAAAGCAGGGATCATAGAACTTGGGTGCTCTGACATGAGAGCAACAAGCAACTGCAGGACATCCATTAGATTGTCATCCTGttaaataa--aagttataaatttaaattaaaaaa ......---.....:....:........:..:...........:........::.x.....:........x.:x..........:...:.........................-----....--.xx...x......xxx........ 6M3I105M5I4M2D24M 119/139 85.6% 147/94230402 0.0% 10/139 7.2% 116592967 73621588 +5371 chr4 + 190214555 150896068 150896067 150896465 398 TTTTAGTCATTTTCGTAATCTATTTTTTCATTTGTTACACTGGTTTCTGGAAATACACTGAAAGTATGCTTTGGTATACTTTATTATTAATTCAATGAA-----ATCTAATGT------TAGTACTTTTTAAAGCCTTTCATGATGATTCTCAAGATTCATCTTGTGGTAATAAAGGATATTTAAATAAAGATTGCTAGGGCTTAGTTCCTAAGTAGACACATTTACT--CCCCATTACAGTTACATAATTACTGAAGATTTCTTTAAATTTTTACTTTTAAAAAAGTCTAATGTAGC-TTCAAAAATTAAAATTTCAAAATATAAAATTCATATATTACCTCATGCATAGTCAGTAGGTAATTAAGAATGGCCTGTAATTCATCTTCCTTTACTCCAGAATCCTTCAAAAA chr4 + 94230402 34301667 34301666 34302011 34301667 34301666 34302011 345 TCTAAGTCAGTCTCACCATCTGTTTTTCTGCCTGGCAAATCAGTTTGCAGAACAACATAGGAAAC-CATTTTGAC--------TTCCTAGCTTAATGAACTTCAATCTAACATCGAACATAGTACTT---AAATCACTGCAAGAAAACTGGCAG--TTCAGCACGCTACAACGAAG-----TTGAACAATATTTGCTAT-------TTCCTCTACAGAGCCATCTTGTGACATCAAGACAGTAACA------CTGGAAAATAC---------------------AGTGCAAAAGTAGCACCCAGAAAACAAACGTTTAAAA--------------ATTACCTCATGAATAGTGAGTAGATAATTGAGGATTGCCTGCAATTCTTCTTCTTTTATTCCATAGTCCTTTAAAAA .:.x.....x.:..::x....:.....:::::..x:.x.:::....x::...xx...:x.:..::-:::....::--------..x:..::.:......-----......::.------........---...x.x:.x..x..x:.:.xx..:--....x.x:.:x::..::...-----..:..:..x:x......x-------.....xx::...xx...:.xx.--.x:..xx.....x...------...:.:.x.x.---------------------.:xx.x..x.....-::..:...x:...xx..:....--------------...........x.....x.....:.....:..:..x.....:.....x.....:....:....x.:.....:..... 65M1D9M8D16M5I9M6I8M3D24M2D20M5D18M7D22M2I16M6D11M21D14M1I22M14D77M 220/331 66.5% 345/94230402 0.0% 81/331 24.5% 116594401 73620154 +6407 chr4 + 190214555 150897722 150897721 150897830 109 AAGCAACGTGAA---CTCACCTTCATCACTAATTGCTTAATGAACATCAACAAGAATGCTCGTAGAGAAAGCATTTCTTTTTGATTAGGTCGCGGTCCATCTTTTAAAAAAA chr4 + 94230402 34303054 34303053 34303165 34303054 34303053 34303165 112 AAGAAACTTAAATATCCTACCTTCATCACTAGTTGTTTAATGAACATCAACAAAAATGCTCGCAGAGATAAAGTCTCTTTTTGAGTAGGCCGTGGCCCATCTACAAAAGAAA ...x...x.:..---.::.............:...:.................:........:.....x.:x:.:.........x....:..:..:......x:x...:... 12M3I97M 87/109 79.8% 112/94230402 0.0% 3/109 2.8% 116594668 73619887 +11283 chr4 + 190214555 150900025 150900024 150900222 198 AATATACAGACAGAAATTA---TATACCTAATCCTTTTGGGGTGATACCACTTCGATCCTGAGGATTCACTGCCCAGTAGTAGTACTTCAGCGTGTGCATGATGAGAAGCACTGTTCCAACTCTCCGAATGGTGTTATATATGTTGACTGTACCAATGAATTCCGTGGACAGATAAGTATAGAGCATCAGTTGAACCTACA chr4 + 94230402 34304303 34304302 34304503 34304303 34304302 34304503 201 AACAAACAAGTAGAAATTAATACGTACCTATGCCTTTGGGAGTTATACCACTGCGATCTTGAGGATTCACTACCCAGTAATAATACTTCAGGGTATGCATGACCAAAAGAACTGTCCCAACTCGTCTAATTGCACCATATATGTTAACAGTGCCAATGAACTCAGTAGACAAGTAAGTGTACAGGATCAGTTGAACCTGCA ..:.x...:::........---::......xx.....x..:..x........x.....:............:.......:..:........x..:.......:x.:...x.....:.......x:.x...x.::::.........:..x..:........:..x..:....::.....:..x..x.............:.. 19M3I179M 154/198 77.8% 201/94230402 0.0% 3/198 1.5% 116595722 73618833 +10934 chr4 + 190214555 150905834 150905833 150906001 168 TTACCTTGGCTGGGGTATGAATCCATATGGCAGGATTAAGAAGAACGTGATCACACAATTGCTTGAGCAGGGGCATCCCATTCTGCAGATTACTCAGATATTTTGAAAATGCAAGGCAAAGTTCAAGTACTGCTCTGCTAACATGAGATTTGGAAGACTGCAAAAAAA chr4 + 94230402 34305752 34305751 34305919 34305752 34305751 34305919 168 TTACCTGCGCTGGGATATGAATCCATATTGCAGGATTAAGGAGAATATGATCACATAGCTGTTTCAGCAAGGGCACCCCATTGTGCAAGTTGCTCAGGTACTTAGAAAATGCAAGGCATAGCTCTAGCACAGCTCGGGTAACATGAGCTTTGGAAGACTGTAAAAGAA ......xx......:.............x...........:....::........:.::..:..x....:.....:......x....::..:.....:..:..x..............x..:..x..:..x....x.x.........x............:....:.. 168M 137/168 81.5% 168/94230402 0.0% 0/168 0.0% 116600082 73614473 +9216 chr4 + 190214555 150908311 150908310 150908527 217 AAGAAACAAATAA------------AGGCACTCACCATATAGTCAAATCAATCTCATCAGACAAATATTGCCTGTAATCCAACTGTGCAAAAAGTGGAAATAGTACTTGTACTCCTCCAATTGAATGCATTGCACTTTGGATGGAATGTGTTAAAACTGCCTTTACATCCTTGTAAGATCAAAAACACAGTAAAGAGTTCAATGATT--------TTTTTTCCAAAACAATTAAAAA chr4 + 94230402 34307472 34307471 34307705 34307472 34307471 34307705 234 AAGAAACAAAGAACACAGTAACCATATGCACTCACCAAACAGTTGTGTCAATGTGGTCCGATGAATATTGCCTATAGTCTAGCTGTGCAAAGAGAGGGAAAAGTACCTGCACTCCTCCAATGGAGTGCAAGGCACTTTGGACCGAATGTGTCAACACGGCTTTCACATCCTGataaa---aaaaataaaataaataaatCAAAAAGCACTGAGAACTTTCTGAGAAACTGTTAAAAA ..........x..------------.x..........x.:...::x:.....x.x:..x..::..........:..:..:.:.........:..x..:..x.....:..:...........x..:....xx..........:x........:..x..x..:..:.......x:...:---.....:.x.:....x.:x....x:.x:--------:...:.xx:....x:....... 13M12I152M3D27M8I22M 159/214 74.3% 234/94230402 0.0% 23/214 10.7% 116600839 73613716 +14009 chr4 + 190214555 150908611 150908610 150908859 249 ACATCAAAAATTACCATTATAAATGTTCTTAAAAGATCACAGTTAGTACCTGGAGCATGAGTGCATGTGGTGAATGAACAAAAATTGAAGGGTTGTCCTTAGGAGATGATTCAAGACAAAGCTGGGCATCTGTAGCCCGTGGATTGTACGTGAATGCAATGGCACTAGAGAGTTTCCCATCGTACAATAAAAGTTTGTGATGCTCAGCAAGGAAAAGGTCGCTTTCTGCTTTGAATTTAAATGTACCCT chr4 + 94230402 34308552 34308551 34308796 34308552 34308551 34308796 245 ACAGTAACCATTTACATTCTAAATCTATGAAAAATGTTGCCAT----ACCTGCAGCATGAGGGCATGTGGTGAATGAACAAAAATAGAAGGGTTATCTTTAGGGGACGACTCTAGACAGAGCTGTGCATCTGTAGCCCTTGGATTGTACATAAAAGCAATAGCACTGGATAGCTTGCCATCATACAGCAACAATTTGTGATGTTCATCAAGGAAGAGATCACTTTCTGCCTTGAATTTGAACGTTCCCT ...x:..xx...xx....x.....x.x:xx....x:.::.x:.----.....x........x.......................x........:..:.....:..:..:..x.....:.....x.............x..........:.:..x.....:.....:..x..:..x.....:....::..x.:.........:...x.......:..:..:........:........:..:..x.... 43M4D202M 193/245 78.8% 245/94230402 0.0% 4/245 1.6% 116600059 73614496 +11616 chr4 + 190214555 150914187 150914186 150914414 228 CAAACTACCTTGTATCCCAGGCCCAACTGATAAATAGCAAATATCTGAGCTGCATTTAGAGCTTCACTGAAAAGGTAAACTGCAGTCATCTGACCACAGAATACTCTATTAGCATCTGCTGTTTCTGATGAGCCCAGGAAACATTTGTCAAAGGTCTGTAAAAGAAAAAA---AAA--AAGGAATTAGGAAAAAACAAAAAAAAACTCCAGAAATAAT-AAAAACCTATATTAT chr4 + 94230402 34309548 34309547 34309781 34309548 34309547 34309781 234 CATGCTACCTTATATCCCAGACCAAGCTGATAAATGGCAAAGATTTGAGCAGCATTGAGAGCCTCACTAAAAAGGTAAACAGATGTCATTTGCCCACAAAACACTCGATTGGCATCTGCTGTTTCTGAGGAACCCAGGAAACATTTGTCAAATGTCTGAAAAAGAAACAATTTAAATTAAGCAACATGGGCAAATTAACCAAGAAATATACATATCATCAAAGAATAATATTAT ..x:.......:........:..x.:.........:.....x..:.....x.....x.....:.....:...........x.xx.....:..x.....:..:....x...:.................x..:....................x.....x........x..---...--...x..:xx..:x...x:..xx..:..x.x:.x.x..x..-...:.x:x....... 170M3I3M2I40M1I15M 180/228 78.9% 234/94230402 0.0% 6/228 2.6% 116604639 73609916 +10590 chr4 + 190214555 150915596 150915595 150915755 160 GAAACTACTTACATCGCTAGTGTTGACAAACCATGTTATCTCTCCATAGGAAGCCAGCTCACCATTCACATAACATCGAAGTTCACTATTCTTCCATCGGTTATAGATGTGTACTATGGTAACCATATACCACTGCAGAAGCAAAAAACAGTTAAAAATA chr4 + 94230402 34310010 34310009 34310168 34310010 34310009 34310168 159 GAGTTTACTTACATCATTGGTGTTGACAAACCATGTTATTTCTCCATAAGATGCCAGTTCCCCATTCACATAGCATCGAAGTTCACTATTCTTCCAGCGGTTATAGATGTGCACAATAGTAACCATATACCACTA-AAAAAAAGAAAACAAGTGATAACA ..:x:..........::.:....................:........:..x.....:..x...........:.......................x..............:..x..:................:-.:..:x.:......:x.:.x..:. 135M1D24M 133/159 83.6% 159/94230402 0.0% 1/159 0.6% 116605586 73608969 +18692 chr4 + 190214555 150916399 150916398 150916804 406 ACCTTTTGTGGCTTGAAATCAAATTTCACACAGTGTTGAAAGCCTTTTCCTTTTGACTTTATTGATGTTACAATCAAACAGCCTCCAACAAAATGAGCAGAATAGCCAAGACCTTTGCTGGTTCTGAAACTA-TAAAGAATAGTT--TTCATTTTACCTCTAAATATTCTTCTCAGTTTCAAAGTAAGGTTTTAACACTAATCAG----------TTACAGAAATACATACCAATACAAATATGGTTTATCCTTATCTACATTGATGTTATTTACAGGATCCATTCTAAGCCATGTATGAAATGTAAAACCATTCTGGTATGGCCATTTGGCTATAGGAGGTAATGCAATAGCCTAAAGGAAAGAAACTTTGAGTTATTAACTCACGTGAAAACCTGTCTTATTAAAATCATGAAAATA chr4 + 94230402 34311445 34311444 34311846 34311445 34311444 34311846 402 ACCTTTTGTGGCTTAAAATCAAATTTTACACAATGCTGAAAACCTTTTCCCTTTGATTTTATGGACGTTACAATCAAGCAGCCACCAACAAAGTGAGCAGAATAGCCAAGTCCTTTGTTCGTTCGAAAACTAATAAAGGAGAACAAAGTCAGCACGTACATAGATGGCAGCAAAAGTCACTGAACAAATCATGACTGAACATCAGAAACGAGGTTTTACATTAATACGCACCAATACAAATATGGCTTATCCTTATCCACATTGATATTGTTTACAGGATCCATCCTTAACCAAGTGTGAAAAGTAAATCCATTCTGATAGGGCCACTTGGCTATAGGAGGTAAGGCAATAGCCTAAAGAAAATAAAGTT----------ATTCATGTAGAAA-------TATCACAATACTGCAAGTA ..............:...........:.....:..:.....:........:.....:.....x..:...........:.....x........:.................x......:.x....x:......-.....:.x.::x--x...x:x:::x:x..:..:x:xx:xxx...:x.x:.::..:x:x.x.x::xxx.....----------.....xx.....::................:...........:........:..:..............:..x.:...x..:.....x.....x........:..x.....:.................x..............:...x...x..----------.:...:..::...-------...:.x...xx..x..:.. 132M1I12M2I58M10I155M10D13M7D19M 298/389 76.6% 402/94230402 0.0% 30/389 7.7% 116604954 73609601 +9562 chr4 + 190214555 150921185 150921184 150921350 166 AATATTTACTTACTGCAGCACTCTTTCCTGGAAAGTTAAAAAAGGCATCAGGACCATACTTCTGAGGCATATGCTTTAACACAGACAGCAACTTCCCAGCATGTGGAGGCTATGAAGATAA----------TTAACAATTCATTAACCACATTATTTACCATAAGATAAAAAAAAC chr4 + 94230402 34313877 34313876 34314046 34313877 34313876 34314046 170 AATATCTACATACTGCAGCACTTTTTCCTGGAAAGTTGAAGAAGGCATCAGGTCCATACTTCTGAGGCATGTGTTTTAACACAGACAACAATTTCCCAGCATGTGGTGGCTGTCAAAAAGAATTTTTAGATTTGGAAATAAATAAAACACGT------CCATAAGATAGAAAATAC .....:...x............:..............:..:...........x.................:..:.............:...:..............x....:.x..:.x:.----------..::x...xx..x..x...:.------..........:....x.. 121M10I21M6D18M 134/160 83.8% 170/94230402 0.0% 16/160 10.0% 116607308 73607247 +21721 chr4 + 190214555 150928502 150928501 150929102 601 TTAAGTTTTTTTACCCATCGTCCTTTATCTCCTTGAAGTTTACTGAAGAAAAGCTTTAGCTCGCGAACTGTCAAATTATAGCTAGCCAGCACTCCCAACATGTCAACCAAAAGATCTGGAAACAAAAGAAAACGATAAAATAACTCAGCTAGTTATATTTCTCGAATATTTAAAATAAACTGTGCTTATTTAAGGGCTTGGACACTAAAGTTCTAGGTGCATGCTACATGCTCAAATATTTC--TTAAATATTGCTAAATGGAATAAGAAAAATATGTATTTGAAAATCAAACTTTATTTCTTTGCATATATTGTACTATAGAAAAAATCATACCTGCTATCATATTGTCAACTTTTTCAATTTTCCCAAGCACTTTTTCAACAAGGCCTACTTCAGTGCAGACTTGAAGATTCCGTATGCTTTTCTTCAGAATGGCTGTAAACATGCTCCAGACTTCTGCTTGGCACGTAATGTCACATTTTTCCAGTAGGTCCACCATGCAGTTAATACTCTCACCTTCTTGGATAATGAAATTCATTTCCAGATCAAACTGTCCTCCTACCAACTTACAAGGAAAA----AAAAAAAACACATTAAAAGCATTA chr4 + 94230402 34316270 34316269 34316790 34316270 34316269 34316790 521 TTATTTTATTTTACCCATCTCCCTTTTTCTCCTTGAAGTTTGCTGAAGAATAACTTTAGCTCTCGAACCGTCAGGTTGTAGCTAGCCAACACACCCAGCATATCCACTAAGAGATCTG-----AAAGGAGAACAACAATATAA--------------------------------------ATACTTATTAAGATGCT---ATGTCAAATTTCTGT-----TGCTTCATTATTAAGAGTTCCCATGAGATTTTAC--------ATAATGAAAATAC---------AATCTGACT-----------CATGTA-------GTAGGTGAAGTTGTACCTGCAATCATGTTGTCAGCTCTATCAATCCTCTTGAGCACTTGTTCAACCAGCCCCACTTCTGTGCACGCTTGTAGATTGCGTATACTTTTTTTCAAGATAGCTGTAAACATGCTCCACACCTCAGCCTGACAGGAGATGTCACATTTATCCAGCAGTTCTACCATGCAGGTAATGCCCTCTCCTTCTTGGATGATAAAGTTCATTTCCAAGTCAAATTGGCCTCCAACAAGCTTTCAGACAAAATATTAAAAAAAAAAAAGTCAAAACACCA ...xx..x...........x:.....x..............:........x.:.........x.....:....::..:..........:...x....:...:..x..:..:.......-----...:..:...:.:..x....--------------------------------------:.:......x.::x...---.::::...x....:x-----....x...xx.:..:x:..:.--.x.:..x..:.--------....x:......:---------....x:...-----------...:..-------:...:x:..:.::.......x.....:......:..:.x.....::..:::.......x......x..x..:.....x.....x:....x.....x.....:.....:....::..:.................x..:..x..:..:..x.x:...........x.....:..x..:.........x....:.:...x...........:..:..:..........::.....:..x.....x..x.:...x..::x....----........x.x.x.x...:..::. 118M5D20M38D17M3D15M5D21M2I11M8D13M9D9M11D6M7D261M4I24M 390/515 75.7% 521/94230402 0.0% 92/515 17.9% 116612232 73602323 +3079 chr4 + 190214555 150932777 150932776 150932858 82 GTGGTGGCAGACACCTTTAGCCCCATCTACTTGGGAGGCTGAGACACAAGAATCACTTGAACCCACGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x.x...::...x.......::........x.x::x...x............x:..x:xx:..:..:.. 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 74899576 NA +38365 chr4 + 190214555 150936931 150936930 150937798 868 TACAACTAACATAAGAGACCTTACCTTCATCTTAATATTACTTACATCAAT-----------------------CATTCCTATAAGTAACCACCCTTTCAAGAAGCTATAGATT-----TTTGAAAGTAATTTCCAAAAAAAGCCCCAAATATTTCACCAGCTTTTAAACTGAGATTATA-ATGGTGAGAGCAATATCCAGACAGGTGTTTTAAATATTCCTCCATTGCTTTAAATACTATAAAATATGCCTTTCAAGGAGAAA----TTGATGGCAGAAATTTGTACATACAAATGTGTGGCATATTTGATATACTATATGTATGCATATCTATTATACCTA---AAAAACATGCACAGGGTCTACAGTATGTCATGTTAACCCTTTCTAATAGTTATTTGAAGCTGATCAACCTTCAAAACACAAATTTGTTTCCAATGACAGGGATCATAATCCAGGTACAGGCATTGGCTAGTTATTATCTGAGCTGTAGTAATGGCTCTGCACTACAAAATGTAATCTTCCCAAATGTCACAGTAAGTTATGAATATCTGAGCAGCCTAATGCACTTTACTAGCCATGAAATGTGAAAATGTAATCTTATTACCTTTTTTATGGTTGTATTTTTTTGAATAATGTAGCATGGAAACTGATGTATAGTCTTTTTCTACATTTTAGCATGATTTGGTCTCCTTTGCTATATAGAACATTTTTCAAAACTCTCCATTTCAACATATTTT-AGTCTTGGCCTGAACTTCATAAACAATTTTTATAGCAGCCTTCAGGGTGGCATAACATGCTTT---------CTATAGGTTATACTTTAATGCATAAGGTTATAGAAA---TTTTAAAGCAACTTATTCGAAGAATTCAAATAAACCTTTATAAGTTTTGTATGAGGACTTTAAT chr4 + 94230402 34318750 34318749 34319622 34318750 34318749 34319622 873 TAAAACTACAAGAGGTGACCTTACCTTCACCTTA---TAGTCTACATCACCAATTTTTCACTTTTGGCTAGATACACTATTATCAGTAACCACCCATCCAGGAAGCTGTCAAATCAGGCTTCCAATCTAATCTGCAAAAA------TAAGCATTTCAGCAAGTATATCCCAGAAATAAGATGCGATGGAAGAAATAATTAC-----TATTTTAACATTTCCTTTA--------------AGGGAAAATG-------AGGACAAAAATATTGATGG-AGAAAGCAATATAC-TGAAGGCACAGCGCAGGTGATGTACTGTATGTATGCATCCCCATTAGATACACATAAGCACACACACA----CCCCAGTATGTCATATTAACCCTTTCTAATGGTGATTTGAAACTGATCAACCTTCAAAACACAAATTTGTTTCCAATGACAGGGATCATAATCCAGGTCCATGCATTGGCTAGTTATTATCTGAGCTGCAGTAATGGCTGTGCACAGCAAAATGTAATCTTCCCAAATGTCACAGTAAGTTATGAATATCTGAGCAGCTTAATGCACCTTACTAGCCATGAAGTGTGAGAATGTAATCTTATTACC-TTTTTATGGTTGTATTTTTTTGAATAATGTAGCCTTTGAACTGATGTATAGTCTTTCCTTGCACTTTAGCGTGATTTGGTCTCTAATGTCGCACAGTACATTTTTCAAAATTCTCCAATTCAACGTATTTTAAGTCTTAGGCTGAGCTGCATAAACAATCTTTATAGCAACCTACAGGGTGGCATAACGTTTTCTTTCCCTGGCCTGCAGCATAGAATTAACTG--TAAGCTTATAGGAATGGTTTTAAAGTGCAGTATTCAAAGTATTCGAACACATCTTGACAAATTTTACATTTTGCCATTAAT ..x.....xx.x.:.x.............:....---.x:::.......x:-----------------------..:.x:...x...........x.:..:......:.x:.x.-----..:x..xx....:.x......------:..::......x..:x.x.xxxx.x..:..x.x.-::.:..::..x....x::.x-----.:......xxx.....::.--------------.x::..x...-------....x...----.......-.....x:x:..:.:-::..x.::::..::.xx....:....:...........x:.:....x.:x:.---..:x...::....----.:x...........:...............:..x.......:........................................................x..x..........................:..........x.....x:...................................................:........:..............:.....:.................-.................................x.xx:..................:::.:..:......:............:xx..::::.:..x.............:......x......:......-......:.x....:..x..........:.........:...x..............:.x:.:.---------..::..xx..x.x..x.x..--....x......:..---........::xxx.....:...x....:..:.x.:...x.:..:....::..xxx.x.x..... 34M3D14M23I40M5I21M6D34M1I20M5D19M14D10M7D8M4I7M1D14M1D52M3I13M4D246M1D131M1I63M9I20M2D14M3I64M 648/824 78.6% 873/94230402 0.0% 93/824 11.3% 116618181 73596374 +3560 chr4 + 190214555 150940765 150940764 150940880 116 TTTATTTAAAAGTTCTATTTGTTGTTATTTTTCAAATCTGCTTAGTAATCTTCTCTCTTTCCTACATAATCTTTTAAGTGCCTTTTTTGTTTTCCTTCTTTTTGTTTTCTTTCTTT chr4 + 94230402 72471300 72471299 72471410 72471300 72471299 72471410 111 TTTATTTAAATAGTCATAACCCTATTACTTTTCA---CTGAAACGTTATTTTTTCTCTTAC--AGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTT ..........x:x..xxxx:x:.:...:......---...xxxx..x..:..:......x.--.x..xx....:.::..x:...x.....:.....:......x........:... 34M3D24M2D53M 78/111 70.3% 111/94230402 0.0% 5/111 4.5% 78469465 NA +16768 chr4 + 190214555 150949998 150949997 150950312 315 AATATGCAAATTTGAACCTTCAAACAGGAAATGAAATTTTCTAAATCCATTACATAACTTCAGATTCATGTGTGCACTGAAGGCTAATAAATCATCTAAACCTTCATACAGAGAACCTTTTTAAATTTGCATTTATCTACAGTAAATTCTGTCATGTTCTTTAATAGCTTGCTGGTTCAATC-TAGCAAACTAGTGATTTATAGCAGTGACATATTTCAAAAATCAGAAATCTCTCACTATGTGACAACCAGTC----AAAGTCCACTGAACTTACATTACT-TGAACTCAAACATCATAGGATATGAAAGAGATAGCAAA chr4 + 94230402 34322340 34322339 34322654 34322340 34322339 34322654 315 AACATGCAAATTTGTAGCTCTATACAGGAAATGAAATACCCTGAATT--TTACATCACATCAGATTCATATATGGATTGAAAGTAAATAAATCATTTAAACCATGATACAGAGAACCTTTTTAAATTTGCATTTATCTACAGTAAATACTGCCATGTTCTTTAATAGCTTGCAAGTGCAATCTTAGCAAACTAATGATTTATGGCTGTGAC--ATTTTAAAAATCAGAAATCTGTCATTTCATGACAGCCAGTAGAAGAAAGTCAGCTCCAGTTACTATACTCTGCATTTAAAC-TCA-AAGACACGAAGCAGATAGCAAA ..:...........x.x..::.x..............x::..:...:--......x..x..........:.:..x.:....:.:x..........:......x.x..........................................x...:....................x:..x.....-..........:........:..x.....--....:...............x...:.x::.....:.....x----......x:..xx.x....xx....-..x.:.:....-...-.:..:.:...:x.......... 47M2D133M1I28M2D41M4I24M1I11M1D3M1D22M 255/309 82.5% 315/94230402 0.0% 12/309 3.9% 116627658 73586897 +3617 chr4 + 190214555 150955756 150955755 150955834 79 GTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.:...........::........x.xx.x...x...........:.:..x:xx:..:...:. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 74922555 NA +3020 chr4 + 190214555 150962824 150962823 150962896 73 TGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.:..:.:...........::........x.xx:x...x::...........:.:x:xx:..:..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 74929619 NA +3545 chr4 + 190214555 150970360 150970359 150970442 83 CATGGTGGCCTACACCTGTAGTCCCAGCTACTTGGGAGGTTGAGGTGGGAGGATCGCTTAAGCCCAAGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.:...x......:...........::...:....x:xx.x.:.x.:...:.:....::..x..x:.....:.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 74937163 NA +3014 chr4 + 190214555 150970509 150970508 150970575 67 ATAATAATATATACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACA chr4 + 94230402 27325497 27325496 27325563 27325497 27325496 27325563 67 ATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ..:..x:....:..:..x::x.:x:.:...........:...........::...:.:.::x.x... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 123645012 66569543 +3238 chr4 + 190214555 150970516 150970515 150970587 72 TATATACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACA--------CACACACACACA chr4 + 94230402 85834533 85834532 85834612 85834533 85834532 85834612 80 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...x:.:......x.................:.xx:...:x:..:...:.:::.x.:...--------......:..... 60M8I12M 53/72 73.6% 80/94230402 0.0% 8/72 11.1% 65135983 NA +3106 chr4 + 190214555 150970524 150970523 150970581 58 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACA chr4 + 94230402 79265520 79265519 79265577 79265520 79265519 79265577 58 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA ............::........xx...:.:.::.:....:::::.....:..x...:. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 71705004 NA +3459 chr4 + 190214555 150970525 150970524 150970583 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx...:.:....:....:::::.....:..x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71705006 NA +3459 chr4 + 190214555 150970527 150970526 150970585 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx...:..:...:....:::::.....:..x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71705008 NA +3459 chr4 + 190214555 150970529 150970528 150970587 59 GTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265577 79265519 79265518 79265577 59 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATA .............::........xx....:.:...:....:::::.....:..x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 71705010 NA +3146 chr4 + 190214555 150970531 150970530 150970587 57 GTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACACACA chr4 + 94230402 79265519 79265518 79265575 79265519 79265518 79265575 57 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACA .............::........xx.::.:.:...:....:::::.....:..x... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 71705012 NA +3693 chr4 + 190214555 150970539 150970538 150970587 49 GTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACACACA chr4 + 94230402 68837095 68837094 68837143 68837095 68837094 68837143 49 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .....:...................x.:...:...:.....::...... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 82133444 NA +3680 chr4 + 190214555 150972072 150972071 150972118 47 CAAAAATGAAACTAATGAGCACCATCTCATGGGCATTTGAAGTAATA chr4 + 94230402 34328046 34328045 34328092 34328046 34328045 34328092 47 CAAAAACAAGACCAATGAGCACCATCTCATGGGCATTTGAGGTAACA ......::.:..:...........................:....:. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 116644026 73570529 +3075 chr4 + 190214555 150981283 150981282 150981355 73 TGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGTGGGAGAATCGCCTGAACCTGGGAAGTGGAGGTTGTGG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:x::........x:xx.x...x.:.:......::.:.:x.xx:..:...:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 74948078 NA +3104 chr4 + 190214555 150985130 150985129 150985188 59 GCGCCTGTAATCCCAGCTACTCGAGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGGG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x....:.:.........:..:.:......x.xx.x...x..........::.::. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 74951924 NA +3547 chr4 + 190214555 150989485 150989484 150989555 71 CACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGAGAGAATCGCTTGAACCCGGAAGGCACAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.........::::........x:xx.x...x.:.........:....x:x::.....:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 74956278 NA +3710 chr4 + 190214555 150990606 150990605 150990678 73 TGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGTTGGAGGATCACTTGAGCCCAGGAGGTTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.:....:...........::........x::x.x.:.x.......:.....:..x..x:....::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 74957401 NA +3578 chr4 + 190214555 150998217 150998216 150998295 79 GTGGTGCATGACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCAGGGGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x.::..........::.x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 74965016 NA +3102 chr4 + 190214555 151003014 151003013 151003063 50 AAAAAAAAATATGTGTGTGTGTATGTGTTTGCGTGTGTGTGTGTGTGTGT chr4 + 94230402 63364609 63364608 63364658 63364609 63364608 63364658 50 AAGAAAAAGTATGTGCATGTGTATGTGTTCACATGTGTGTATACTTGTAT ..:.....:......::............::.:.......:.::x...:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 87638405 NA +3197 chr4 + 190214555 151008962 151008961 151009027 66 TCCATCT---CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 51472479 51472478 51472547 51472479 51472478 51472547 69 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATA .......---....x.x.x...::......:..x.....:.......x.:.:.......:x..:.:... 7M3I59M 51/66 77.3% 69/94230402 0.0% 3/66 4.5% 99536483 90678072 +3311 chr4 + 190214555 151008966 151008965 151009024 59 TCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548415 85548414 85548473 85548415 85548414 85548473 59 TCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ...:x.............:.:xx....:...:.:.:.::...:..........x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 65460551 NA +3437 chr4 + 190214555 151008969 151008968 151009021 53 CAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:...............:.:..:...:.....x....::. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 149513966 40700589 +3063 chr4 + 190214555 151008970 151008969 151009019 50 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:......x........:.:..:...:.....x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 149513964 40700591 +3123 chr4 + 190214555 151008972 151008971 151009023 52 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:....x..........:.:..:...:.....x....::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 149513968 40700587 +3425 chr4 + 190214555 151008973 151008972 151009043 71 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAAAAT---GGTATTTTTTTT chr4 + 94230402 85548420 85548419 85548493 85548420 85548419 85548493 74 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTT .............:.:x.....:...:.:.:.::...:..........x.....x.:.:---.:...::x.... 59M3I12M 53/71 74.6% 74/94230402 0.0% 3/71 4.2% 65460553 NA +3214 chr4 + 190214555 151008975 151008974 151009027 53 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548420 85548419 85548472 85548420 85548419 85548472 53 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA .............:.xx.....:...:.:.:.::...:..........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 65460555 NA +3552 chr4 + 190214555 151008990 151008989 151009046 57 TATATATATATATATATATATATATATATATATATATAAAATGGTATTTTTTTTTCT chr4 + 94230402 65285590 65285589 65285646 65285590 65285589 65285646 57 TACATATATACATATCTATATATATTTGTGTGTCTATAAAATGTTATTATTTTTTCT ..:.......:....x.........x.:.:.:.x.........x....x........ 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 85723400 NA +3291 chr4 + 190214555 151011058 151011057 151011116 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGACGCCGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::.......xx..x.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 74977852 NA +10541 chr4 + 190214555 151014421 151014420 151014648 228 ACTTACCAGGTTAAAGACAGTTTCTACAATATCCCTATTGGATACTTCTCCAACTTCAACCAAACCGGTCAACACGGCAAATTTCATTCTGATGCCCCTGATGGGGAGCCCTGGTTTCAGAGACAATGCA--------CCCCCTTCAGTAGGGGTTTCTTCTCTCCCTCCACCTCCCCCGTCATCACCTGTTGGTGGCGGGGAAGGGACACGATTGTCTTCGCTAGCCATTGCTAG chr4 + 94230402 34350483 34350482 34350710 34350483 34350482 34350710 228 ACTTACCAGGTTGAATATCGTATCCACGATGTCTCTGTTCGACACCTCACCAACCTCTACCAGCCCTGCCAGCACGGCAAACTTCATCCTGATGCCTCGGATGGGGACCCCTGGATTCAGAGGC--TGCAGCACGCTTCCCCCTTCGGCGGCGTTTCCTTCCTTCCCCGCTCCTCCTCCGCCATCACCTGTTGGCTGC------ACAACTTGTTTGCCGTCGCTCGCCATGGCCGG ............:..x.:x..x..:..:..:..:..:..x..:..:..x.....:..x....:x..x.:..:.........:.....:........:.x........x......x.......:.--....--------........:.::.x.x..:....::....:x.x.....:...:.............:x..------:x:..x:.x...:.x.....x.....x..::. 124M2D4M8I60M6D32M 165/220 75.0% 228/94230402 0.0% 16/220 7.3% 116663938 73550617 +3613 chr4 + 190214555 151034485 151034484 151034550 66 GTGGCGCATGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:...:.--......:.........:..:........x.xx.x...x.:.........:.:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 75001284 NA +3261 chr4 + 190214555 151043404 151043403 151043474 71 CACCTGTCATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x...x:.:.......:...::........x.xx.x...x..:..........:..x:xx:..:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 75010197 NA +3592 chr4 + 190214555 151057182 151057181 151057282 101 CGTGGTGGTGCATGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATGACACCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::........:.--....x.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:..------..x....::... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 75023985 NA +3175 chr4 + 190214555 151058032 151058031 151058072 41 AAAAAGAAAAAAAAAAAAGAAAGAAAGAAAAAGAAATTCAG chr4 + 94230402 75300456 75300455 75300496 75300456 75300455 75300496 41 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAG .....:..............:...:...:.:.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 75757576 NA +3754 chr4 + 190214555 151061051 151061050 151061120 70 CGTGGTGGTGCACATCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGAAGAATCTCTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.........:.--...:.:...........:.........x.xx:x...x.x.............. 15M2D53M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 75027854 NA +3281 chr4 + 190214555 151069079 151069078 151069157 79 GTGGCGCACACCTGTAGCTCTAGCTACTAAAGAGGCTGAGGCAGGAGAATCACTGGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--.....:..:.......x:.:........x.xx.x...x....x......:.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 75035878 NA +3162 chr4 + 190214555 151070805 151070804 151070879 75 AAGAGCACTCTTAGGAGTGAGAAAGAATTTCTTCTTTTTTCTTTTTTTTTTTTTTTTTGAGACAGAGTTTTCTTC chr4 + 94230402 54071219 54071218 54071288 54071219 54071218 54071288 70 AAGAGAACTCCAAG-----ACAAAGAAATACAGCTTTTTTCTTTTTTTTTTTCCTTTTGAAAGAAAATTTGTTTC .....x....:x..-----.x......x.x.xx...................::......:.x.:.:...x:... 14M5D56M 54/70 77.1% 70/94230402 0.0% 5/70 7.1% 96999586 93214969 +3152 chr4 + 190214555 151071561 151071560 151071622 62 GTGACAAAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAATTGAATTTTACTTCTGTTGGGG chr4 + 94230402 76294360 76294359 76294421 76294360 76294359 76294421 62 GTAACAAAAGAAGAAACAAACTTAAAAAAAAAAAAAAGAATTAAAACTTATTTCTTTCAGGG ..:.....:x....xx.x.x..:..............:....:..x:...:....x.::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 74777201 NA +3701 chr4 + 190214555 151073557 151073556 151073616 60 TGCACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x......:...........::.:......x.xx.x...x.:...........:.. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 75040352 NA +3013 chr4 + 190214555 151074832 151074831 151074909 78 CATGGTGGCTCACACCTGTAATACTAGCACTTTGGGAGGCTGAGGCAGGTGGATCACTTGAGCCCAGGAGTTCAAGGC chr4 + 94230402 76033197 76033196 76033272 76033197 76033196 76033272 76 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ..::....:x...:--....:.x.:...xx:...::........x.xx...:.x.......:.....:..:.:x:... 14M2D62M 52/76 68.4% 76/94230402 0.0% 2/76 2.6% 75041635 NA +3728 chr4 + 190214555 151074972 151074971 151075051 80 GTGGTGCACACCTGTAGTCCCAGCTGCTTGGAAGGCTGAGATGGGAGGATCACTTGAGCCCAGGGAGGTTAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGCTTTGGGCTGTAG .........:--......:......:....:.........x:xx.x.:.x.......:....-.:..x..x:.....:.. 10M2D50M1D17M 60/77 77.9% 77/94230402 0.0% 3/77 3.9% 75041771 NA +3220 chr4 + 190214555 151083027 151083026 151083109 83 CATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x....:.:...........::........x.xx:x...x.:........::.:.:x:xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 75049830 NA +3248 chr4 + 190214555 151088519 151088518 151088590 72 TGTGCCTGTAGTCCCAGCTACTTGGGAGGTTGAGGCAGGAGGATCCCTTGAACCCAGGAGGCGGAGGTTGCA chr4 + 94230402 76033205 76033204 76033276 76033205 76033204 76033276 72 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::.x......:...........::...:....x.xx.x.:.x.x...........:..x:xx:..:..:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 75055314 NA +3487 chr4 + 190214555 151089497 151089496 151089570 74 GTGCACCTGTAGTCCCAGCTACTGGGGAAGCTGAGGCAGGAGAATCACTTGAGCCTGGGAGGTGGAGTCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::.:......x.xx.x...x.......:..::.:..x.xx:.x...:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 75056293 NA +7191 chr4 + 190214555 151099583 151099582 151099855 273 GCCCCGCCCCCGTACGCCTAAGTTCTCGCGCGA----------CTCCCACTTCCGCCCTTTTGGCTCTCTGACCAGCACCATGGCGGTTGGCAAGAACAAGCGCCTTACGAAAGGCGGCAAAAAGGGAGCCAAGAAGAAAGTGTAAGTCGCGACTGTCGTGGCGTCTTGCTTTTTGGGGGTCTGCTGGAATCGGCGG-GCTGGTCCTAGATCGCGGCGTAGGCCGGATGGCGAGGATTCCAGTCGGATTGTGCGGGCCGTG-GCGGGTTGGTGCACCCAGGAACG chr4 + 94230402 34368733 34368732 34368976 34368733 34368732 34368976 244 GCGCCACTCTCGTA----TAA--TCTCGCGCGAGGGGGCGGTTCCCTCTTTTCCGC------GGCGCGGTG----GCACCATGGCGGTCGGCAAGAACAAGCGCCTCACCAAGGGCGGCAAGAAAGGCGCCAAGAAGAAAGTGTACGT-GCGGCCG----GGC------------GGGAGGCGGTGGGACCCGGGGACGTCGG--CTGGGGCGCGGCGGCCGCAGGATGCCGCGGATACGAGGCGGATGGTGGCGGCCGGGCGCAG------GCAGCTAGGAACG ..x..:.:.:....----...--..........----------.:.:.x:......------...x.xx..----.............:.................:..x..:........:..:..x.................x..-...:.:.----...------------...:.x.x.:x...x:...x.:-.::..--..:.:x.......xxx..x.....x..x....x.x..x.....x...xx.....x.-..:.------...x.:....... 14M4D3M2D10M10I13M6D9M4D73M1D7M4D3M12D22M1I5M2D56M1I4M6D13M 181/232 78.0% 244/94230402 0.0% 53/232 22.8% 116730850 73483705 +7973 chr4 + 190214555 151100474 151100473 151100595 122 TTAAAATCCAGGGTTGATCCATTTTCTAAGAAAGATTGGTATGATGTGAAAGCACCTGCTATGTTCAATATAAGAAATATTGGAAAGACGCTCGTCACCAGGACCCAAGGAACCAGTAAGTA chr4 + 94230402 34369214 34369213 34369335 34369214 34369213 34369335 122 TTTAAATGAAGGGTTGACCCTTTCTCCAAAAAGGACTGGTATGATGTCAAAGCGCCAGCGATGTTTAATATCAGAAACATTGGGAAGACTCTTGTTACCAGGACCCAAGGAACCAGTGAGTA ..x....xx........:..x..:..:..:..:..:...........x.....:..x..x.....:.....x.....:.....:.....x..:..:.....................:.... 122M 100/122 82.0% 122/94230402 0.0% 0/122 0.0% 116731260 73483295 +14117 chr4 + 190214555 151100959 151100958 151101165 207 TTTTTTTCTTTTGTAGAAATTGCATCTGATGGTCTCAAGGGTCGTGTGTTTGAAGTGAGTCTTGCTGATTTGCAGAATGATGAAGTTGCATTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAGGGTAAAAACTGCCTGACTAACTTCCATGGCATGGATCTTACCCGTGACAAAATGTGTTCCATGGTCAAAAAATGGCAGGTG chr4 + 94230402 34370173 34370172 34370379 34370173 34370172 34370379 207 TTGTTTCATAATGCAGAAATTGCCTCTGATGGCTTGAAGGGTCGTGTATTTGAAGTGAGTCTGGCTGATCTGCAGAACGATGAGGTTGCCTTCCGTAAATTTAAGCTGATAACTGAGGACGTTCAGGGGAAAAATTGTCTGACCAACTTCCATGGAATGGACCTCACCCGCGACAAAATGTGTTCCATGGTGAAGAAGTGGCAGGTG ..x...:x.xx..:.........x........::.x...........:..............x......:.......:.....:.....x..:x.x.....:........x.....:..:........x.....:..:.....:...........x.....:..:.....:....................x..:..:......... 207M 173/207 83.6% 207/94230402 0.0% 0/207 0.0% 116730786 73483769 +4061 chr4 + 190214555 151102035 151102034 151102134 100 GTTCGAATATTTTGTATGTGGGAATGAATGATGACAAAATGTTTCAGTCCCAAATGATACATACTGATTATACCATTATATTTATCCTGACATTCCTCTA chr4 + 94230402 34371639 34371638 34371736 34371639 34371638 34371736 98 GTTCAGAGGCTCTG-GTTTGGGAATGAATGATGACAAATTGTTTCGGTCCCAGATGACACGAAATGATTTTAATTTTCCCATT-TTCTGACATTCCCATA ....::.x::.:..-:.x....................x......:......:....:..:x.x.....x..x:x..x:xx..-.:..........:x.. 14M1D68M1D16M 72/98 73.5% 98/94230402 0.0% 2/98 2.0% 116730396 73484159 +15431 chr4 + 190214555 151102859 151102858 151103097 239 TTTTTTCTCCAGACAATGATTGAAGCTCACGTTGATGTCAAGACTACCGATGGTTACTTGCTTCGTCTGTTCTGTGTTGGTTTTACTAAAAAACGCAACAATCAGATACGGAAGACCTCTTATGCTCAGCACCAACAGGTCCGCCAAATCCGGAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTGAAAGAAGTGGTCAATAAATTGTAAG----TGTTTCTTTGCTT chr4 + 94230402 34370524 34370523 34370766 34370524 34370523 34370766 243 TTTCTTTTCCAGACGATGATTGAAGCCCACGTGGATGTCAAAACTACGGATGGTTACCTACTGCGCCTCTTCTGTGTGGGTTTCACAAAGAAGCGTAATAACCAAATCCGCAAGACCTCGTATGCCCAGCATCAGCAGGTTCGGCAGATTCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTCCAGACCAATGACCTGAAAGAAGTTGTCAATAAGCTGTAAGCTGATGGTTTTTCTCTT ...:..:.......:...........:.....x........:.....x.........:.:..x..:..x........x.....:..x..:..:..:..:..:..:..x..x........x.....:.....:..:.....:..x..:..:..x................................x.....x......:..........x........::......----..x..:..:x... 226M4I13M 197/239 82.4% 243/94230402 0.0% 4/239 1.7% 116732335 73482220 +8447 chr4 + 190214555 151104174 151104173 151104292 119 CAGGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATTTATCCTCTCCATGATGTCTTCGTTAGAAAAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATGTAAGT chr4 + 94230402 34371299 34371298 34371417 34371299 34371298 34371417 119 CAGGATCCCAGACAGCATTGGCAAAGACATAGAGAAGGCTTGTCAGTCCATTTACCCCCTTCACGATGTCTATGTCCGCAAGGTTAAGATGCTGAAAAAGCCCAAGTTTGAATGTAAGT ......:..............x...........:........:..:..:.....:..:..:..:.......x:..:x.x..:..x..:........:...................... 119M 100/119 84.0% 119/94230402 0.0% 0/119 0.0% 116732875 73481680 +8554 chr4 + 190214555 151104464 151104463 151104632 169 CCTTTTAGTGGGAAAGCTCATGGAGCTTCATGGTGAAGGCAGTAGTTCTGGAAAAGCCACTGGGGACGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAACCACCAGTCCAAGAATCTGTTTAAAGTTCAGACTTCAAATAGTGGCAAATA--AAAAGTGCTATT chr4 + 94230402 34371963 34371962 34372125 34371963 34371962 34372125 163 CTTTTTAGTGGGCAAGCTGATGGAACTGCACGGTGAAGGTGGCGGTGCTGGAAAACCTTCTGGGGATGAGGCAGGTGCGAAAGTAGAGCGAGCTGATGGATACGAGCCGCCTGTGCAAGAGTCTGTCTGAAACT--------AAATATTGACCAAAAATAAAAGTTTTATT .:..........x.....x.....:..x..:........::.::..x........x.:x.......:...:.......x.....x..:..............:..:..:..x..x.....:.....:.:..::.--------.....x..:.x..x.--......x:.... 134M8D15M2I12M 126/161 78.3% 163/94230402 0.0% 10/161 6.2% 116732501 73482054 +3299 chr4 + 190214555 151106612 151106611 151106685 74 GTGCACCTGTAATCCCAGCTACTTGGGAGACTGAGGCAGGAGAATTGCGTGAACCTGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::..:.....x.xx.x...x::.x......::.:..x:xx:..:..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 75073408 NA +3362 chr4 + 190214555 151109768 151109767 151109828 61 GTGGGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x:.x....:.:...........::........x.xx.x...x...........x.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 75076564 NA +3330 chr4 + 190214555 151110756 151110755 151110828 73 TGCTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 75077551 NA +3405 chr4 + 190214555 151115541 151115540 151115610 70 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTCAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......--...x....:.:...........::........x.xx.x...x::...x.......:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 75082344 NA +3201 chr4 + 190214555 151115963 151115962 151116076 114 ATATGTATATACACGTATATATGTGTATGTATATATATGTGTATATGTGCATGTATATGTAAGTATATATGTGTATATTACCACATATACATTTGTGTATACGTATATGTATAT chr4 + 94230402 21109187 21109186 21109292 21109187 21109186 21109292 106 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTA--------CTCATGCTTCTGTGTATATGTGTATGAATAT ..x..:x......:..:.:.x.x...:x.::...x...:....:x:::::..::x::....xx....::.:....--------.x:..:.x.:........:..:....x.... 75M8D31M 67/106 63.2% 106/94230402 0.0% 8/106 7.5% 130006776 60207779 +3530 chr4 + 190214555 151115992 151115991 151116099 108 TATATATATGTGTATATGTGCATGTATATGTAAGTATATATGTGTATATTACCACATATACATTTGTGTATACGTATATGTATATATGTATGTGTATATGTATATACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:.....x.x....x::....x.:..x...:x:.::.:..:x:xxx:..x.....:.x...::x:.:.:x.x...:.......:.:..x.....:..::... 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 130006798 60207757 +3812 chr4 + 190214555 151115997 151115996 151116106 110 ATATGTGTATATGTGCATGTATATGTAAGTATATATGTGTATATTACCACATATACATTTGTGTATACGTAT------ATGTATATATGTATGTGTATATGTATATACATACACGC chr4 + 94230402 21109187 21109186 21109302 21109187 21109186 21109302 116 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..x..:x....::..::...x.x...::.::...x.:.:.:..:.xx..:...:x.:.x.::x.........------...:x.x.:.....:...:....x....:...:...:. 72M6I38M 72/110 65.5% 116/94230402 0.0% 6/110 5.5% 130006810 60207745 +3069 chr4 + 190214555 151116016 151116015 151116138 123 TATATGTAAGTATATATGTGTATATTACCACATATACATTTGTGTATACGTATATGTATATATGTATGTGTATATGTATATACATACACGCATACATACGTATGTGTATATGTATGTATATAT chr4 + 94230402 89812949 89812948 89813052 89812949 89812948 89813052 104 TATATGTTAGTGTTTGTG-----------GCATATA--------GATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATAT .......x...:.x.:..-----------:......--------x...x:...:.......x.:x...:x.xx..::..:.:..x..x.x...:.:..:..x:x...:.:...:......... 18M11D7M8D79M 72/104 69.2% 104/94230402 0.0% 19/104 18.3% 61303067 NA +3216 chr4 + 190214555 151116079 151116078 151116140 62 GTATGTGTATATGTATATACATACACGCATACATACGTATGTGTATATGTATGTATATATTT chr4 + 94230402 76709591 76709590 76709652 76709591 76709590 76709652 62 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCT ....:.:...:::.:.:.x:.....x....x..:.:..........x...:.x.......:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 74406488 NA +3258 chr4 + 190214555 151116334 151116333 151116421 88 ATGTATGTATATACTATGCATACACATACATATGTATATATACACACGTGTACACACATATACATATGCGTATACATTCATACACACA chr4 + 94230402 92344699 92344698 92344786 92344699 92344698 92344786 88 ATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCAATCGTTAACACA ..:.x.:.::.x.x...::.:...x..x.............::....:x:x:...xxx.:........::...x..x..:.xx..... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 58771635 NA +3258 chr4 + 190214555 151116334 151116333 151116421 88 ATGTATGTATATACTATGCATACACATACATATGTATATATACACACGTGTACACACATATACATATGCGTATACATTCATACACACA chr4 + 94230402 92341558 92341557 92341645 92341558 92341557 92341645 88 ATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATATTCAATCGTTAACACA ..:.x.:.::.x.x...::.:...x..x.............::....:x:x:...xxx.:........::...x..x..:.xx..... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 58774776 NA +3046 chr4 + 190214555 151116428 151116427 151116487 60 TATACACACATACATATACACATACACATATATACATATATGTATATATACACACACACA chr4 + 94230402 66642211 66642210 66642270 66642211 66642210 66642270 60 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA .....::.:....xx...:x.......xx..:..:.......x....::...:...:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 84474217 NA +3755 chr4 + 190214555 151120080 151120079 151120162 83 CACGGTGGTGTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGTGGCAGGAGAATCACTTGAGCCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:......::..--......:.........::::......x.x.xx.x...x.......:.....:..x:xx:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 75086883 NA +7242 chr4 + 190214555 151122072 151122071 151122244 173 ACACAGACAAGCTTCTCCTCTAGCTGATCTGTAGAAACTGTATGTAGTTTTTGGGAAATATTCCAGATTTTCCCATAAGTTCTCCACTCATCCAGTCATCATCTACAGATTCCAGCTCTGTTATTATATCTCCAGCCTGTAAGACAAAAGGAGTTAGA------ATTACTGGTTTCTGT chr4 + 94230402 34376623 34376622 34376798 34376623 34376622 34376798 176 ACAAAGACAGGCAACACTTCATGGTG-TGTTTAAAATTTGAACAAAGTTTTTGGGAAATATCCCAGCTCTTCCTTGTATTTCTCCTCTCATCCAGTCCTCGTCTACAGATTCCAGCTCTGTTATAAAATCTCCTGCCTGTAAA--AGAAGGAGTAACATGAGCCATTACAGCTTTCCAT ...x.....:..xx.x.:..xx.x..-.x.x..:..x:..x.::x................:....x.:....:xxx.x......x...........x..:.......................x.x......x........:--.:.......x.x.------.....x.x....::. 26M1D116M2D13M6I15M 130/170 76.5% 176/94230402 0.0% 9/170 5.3% 116745449 73469106 +3266 chr4 + 190214555 151124578 151124577 151124660 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCGGGAGAATTGCTGGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x.xx.x...x::..x...:....:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 75091381 NA +3417 chr4 + 190214555 151125721 151125720 151125781 61 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:...........::........x.xx:x...x::...........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 75092517 NA +11395 chr4 + 190214555 151133062 151133061 151133252 191 ATCCTCAACAGGCTCCACAAAGTTCAGGGGGAAAATCCCAGTTCTGCCTCGAACTTCTCCTCTGGCCCATTCCTCATTCACATACTCTTTAAGAATAATAATTTCTCCCTCTGAGAAACTCAACTCATCCTTCTGCTCTCCAATATATTCAAACCGAGCAACACATCTTGAGCCTCTGAATGAAGAACACA chr4 + 94230402 34379714 34379713 34379904 34379714 34379713 34379904 191 ATCTTCAATTACTTCCACAAAGTTCAAGGGGAAAATTCCAGACGTGCCTCTGAGTTCTCCTTTGGCCCACTCTTCATTTACATATTCTTTAAGGATAATTGTTTCACCTTCTGAAAAACTGAGTTCGTCTCTCTGATCTCCGATGTATTCAAATCGTGCTACACATCTTGGGCCTCTGCACAAACAACATA ...:....:x:x:.............:.........:....x:x......x:.x.......:.......:..:.....:.....:........:.....x:....x..:.....:.....x.::..:..::....x.....:..:........:..x..x..........:.......x.::..x....:. 191M 148/191 77.5% 191/94230402 0.0% 0/191 0.0% 116753348 73461207 +8477 chr4 + 190214555 151137710 151137709 151137879 170 AAAACAAACACAA-CCCACTTACAATCACTTTGACATAGTTGGCAGGAAATATGCCAATCTGGTTTCTACAGTTCCCTCTGTACCAATCTGTATCTATCTTCTCCAGAAGATAAACAATTTCTCCAGAAGTGAGGTTCAAATCATCAACTTGCTCTGTAATATAAAATTAT chr4 + 94230402 34383419 34383418 34383589 34383419 34383418 34383589 171 AAAGTATACAAAAGCTCACATACAACCACTTTAACAAAGCTGGCAGGAAATATTCCTGTGCGACTCCCACATTTTCCTCTGTACCACTTGGCATCAACTCTCTCCAAAAGATAAACAGTATCTCCAGAACGAAGGTCCAAGTCATCAGCGTGCTCTGCAAGACAGCATCAT ...::.x...x..-.:...x.....:......:...x..:.............x..x:.x:.::.:.:...x..:...........x.:x.:...x.:::......:..........:.x.........xx:....:...:......:.x.......:..x.:.:x..:.. 13M1I157M 125/170 73.5% 171/94230402 0.0% 1/170 0.6% 116754291 73460264 +3766 chr4 + 190214555 151139761 151139760 151139849 89 ATTTACATC--CTTACCTGCTGGGAAATCATGAAGAACGACAGCATGAGGAGCACCACTGTCAACAGGCTTCTGAGCGTGGCTTGGATCCT chr4 + 94230402 34383872 34383871 34383962 34383872 34383871 34383962 91 ATTCACATTTACTTACCCGCAGAAAAATCATGCAGTGCTACAGCATGGGGAGCACTTGTGTCAGAAACTTTTGGAGAGCTGTTTGAATCCT ...:....:--......:..x.::........x..x:.x........:.......:xx.....:x.:x:..:x...x.:x.:...:..... 9M2I80M 63/89 70.8% 91/94230402 0.0% 2/89 2.2% 116755889 73458666 +10574 chr4 + 190214555 151143894 151143893 151144305 412 AATATTAATTCCTTACGTTTGGTCTGCTTCTAAGATGTTCATCAAGTGGAGTGATAATCTTCATTTGAGACAGGTGAACTCTGCCAGTGTCTTCTCCCTTTTGGCACTCCAAGTAATTATTTTCCGTCTGCTTCAGCATCACAAGTACATCCCCACGCTGCAAGGTACAATACCACTCTCTGA---------AGCAATTATT--------------------------ATTTAATAAAACATTATTACTTTTTCACATTTTAATCTTTGGAGCCTAAAGCATTTAATAATGTGTAATGGTAGTAACAGAGGCCAGTAATTTTTTTTTT---ACATTAACCAGTA-AGGAAAGAGCTCTACTTTACCTTACAAGAGAGTTCTCCGGGGTTTTGAGAGACAATATCTTCATTGGCAATTCCATGAGGCACAGACAGCTTAAACGTAAACCAAT chr4 + 94230402 34384891 34384890 34385331 34384891 34384890 34385331 441 AAAACTAACTGCTTATCTTTCGCCCATCTTTTAGATACTCAGCAAAGGAAGTCATTATCTTCATAGGAGACAGAGGAACTTTGCCAGTTTCC-CTCTCTTCTGGCACTCCAAGTAATTACTGCTGCTCTGCTCCATAAGCAGAATGAC---CTGGTGCCATAAGGCAAATCAACATTATTGGATTCTGTTTTGGCCGTTGCTTTGTTTTTATTAAAGAAAACACAAGGATTTAATAAACCACCATTG-GATTTCTCAGAGTAACTTTTAAAGCCCAAAGCATGTGATATTTTAACATAACAGGGGCCATGCTCAGGACACTTACTCATGAAACATTAACCACCAGAAGAAAGTGTCCTAC-----CTTACGAGACAGTTCTCCATGGTTTCTGGGAAGGCAGTTTTCCTTGGCAACTCCATGAGGCGCGGACAGCTTGAATAGGAGCAAAT ..x.:...:.x....:x...x.:.::::.:.x....::...x...:x.:...x..x........xx.......:x.....:.......x..:-...:...:..................:.x::xx......:..xx.x..x..xx..---.:x::..:::....:.x.x:.x..:.x.:x..---------:..x:..::.--------------------------..........x..::...:-xx....x..xxx...::...::....:.......x.:...x.x.:xx..:::..x::.x:x.x:...x.xx:..x:.:x.---..........x:.-.:.....x.::....-----.....:...x........:x.....:x:.::.x:xx:.:...x.......:..........:.:........:..::x:.:.x... 92M1D55M3D32M9I10M26I19M1D80M3I13M1I15M5D86M 264/402 65.7% 441/94230402 0.0% 49/402 12.2% 116759003 73455552 +11776 chr4 + 190214555 151147918 151147917 151148194 277 TTACCATGTATTTACTGTAGAGAGGGTGTCCTGGTTTGGGACGAGGGGGTAGCACCGGATCTTGATTTTTAAAAACTTGACTCTTGGCTTTTGAGAGTCCAGTTGCCAAGTTACTTTGTTTTTTCTGAAGATCCATGTCAGAAGAGGATCGATTAAAAGGCAGTTTCTTATTAGATCTTCTGGTTGCAGAAAGCTTTGGGGGAGGTGGTCTCTCAGGGGGCACCTTGGTTGGAGGCTGTTGAGTTGGAATGGTTTTTCCATTCACAGGTCTGAAAGT chr4 + 94230402 34386210 34386209 34386486 34386210 34386209 34386486 277 TTACCATGTATTTATTATAGAGGGGATGACCTGGCTTAGGTCTAGGAGGTAAAGCTGGATCTTGATTTTTTAAGACTTGGCTTTTTGTTCTCTTGGGTCCCAATCTGAGCTTGCTTGTTTTTTTATCAGAAGCAATGTCAGAAGTGGATCGGGAAAGAGCATCCTTCTGGGAGGAGGTCTTGGTTGCAGAGAGTTTTGGTGGAGGTGGCCTTCCAGGAACACCTTTAGGTGGGGGAGGTCGAGCTGGTATAATTTTTCCATCCACAAGCCTAAAAAT ..............:.:.....:..:..x.....:..:..x.x...:....:x:.:..............x..:.....:..:..x.:.:.:xx.:....x:x.x:x.:x..:...xx......x.x.::.x.x..........x......:xx..:..xxxx:....x:xx:..xx.::..........:..:.....x........:..::....::xxx.:..:.x...:..xx..:...:...x..::.........:....:.:..:...:. 277M 189/277 68.2% 277/94230402 0.0% 0/277 0.0% 116761708 73452847 +3419 chr4 + 190214555 151148898 151148897 151148980 83 CATGGTGGCTCATGCCTGAAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:x..:.--..x...:...........::........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 75115701 NA +3558 chr4 + 190214555 151150045 151150044 151150127 83 CATGGTGGCGGACACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x..................::........x.xx.x...xx:.x.........:..x:xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 75116848 NA +3185 chr4 + 190214555 151150177 151150176 151150242 66 TCCATCTC----AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACATAT chr4 + 94230402 51472479 51472478 51472548 51472479 51472478 51472548 70 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT .......:----..x.x.x...::......:x.......:.......x.:.:.....:..x:........ 8M4I58M 51/66 77.3% 70/94230402 0.0% 4/66 6.1% 99677698 90536857 +3079 chr4 + 190214555 151150184 151150183 151150238 55 CAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACAC chr4 + 94230402 78347573 78347572 78347627 78347573 78347572 78347627 55 CAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACAC .....x...x..:.......xx..:.:.xx..:.........:.:.......... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 72802611 NA +3099 chr4 + 190214555 151150313 151150312 151150369 57 ATATATATACATATATATATATATACACACACATATATATATATACATGCTCTTTAT chr4 + 94230402 50629533 50629532 50629589 50629533 50629532 50629589 57 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACATGGTGTTTAT .......:x:.....x....:..........::..x...:.:.x.....x.x..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 100520780 89693775 +3133 chr4 + 190214555 151152482 151152481 151152535 54 ATAATTCCCCAGTTTTTTGCTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 51335322 51335321 51335375 51335322 51335321 51335375 54 ATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTT ..:...:..::....:.::.x:.....x:.........x......:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99817160 90397395 +3284 chr4 + 190214555 151152497 151152496 151152538 42 TTTGCTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTCTG chr4 + 94230402 6554016 6554015 6554057 6554016 6554015 6554057 42 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTG ....:................:.:.:.............:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 144598481 45616074 +4059 chr4 + 190214555 151155748 151155747 151155831 84 ACATGGTGGTGCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.......--..x......:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 12M2D70M 62/82 75.6% 82/94230402 0.0% 2/82 2.4% 75122552 NA +5328 chr4 + 190214555 151159215 151159214 151159361 147 AGTACAATCTATAATGACCACTTACCAAGTTTCTAGTTCTCTCAACATTACTGAGCTTTCCAGATACTGTACTGAAAGTGTTTCCAATAGGTTTTTCAGCAGGGAGAGGAGGTGGACTTTGTGGATCCTCATGTAAACCTGGAAAAA chr4 + 94230402 34390595 34390594 34390733 34390595 34390594 34390733 139 AGAACAGTCTA--------ACTTACCACGTTTTTTACTAGGTCACCACTGTTGGGTTTGCCCGCTGTGATGTCAGAGGTGTTGCCAATAGGCTTTTCGGCAGGAAGAGGTGGAGGGCTATGTGGGATTTCATCTAAAGCTGTAAAAA ..x...:....--------........x....:.x::.xxx...x..:.::..:.:..x..x.x.::x:.:::::.:.....x........:.....:.....:.....x..x..:..x.....:x::....x....x...x..... 11M8D128M 95/139 68.3% 139/94230402 0.0% 8/139 5.8% 116768620 73445935 +7300 chr4 + 190214555 151165576 151165575 151165889 314 GAGAAGTGCTTACATTTTCCTGGTTTGGCTGGAATTCGAATTACAGTGGGCTTCCTGGTGGGTGCTGGTTGAACTGCTCGTTCTTTTATTGGTTCTGTTTTTGCAGGGAGCTGAAAGGGATCTA----ATGAAAAACATAGTTTATTTTGCATGTTTTAGTTAACATGGACTGAAACAAAAAACCTCATTCATAATTTAAGAGTCATATTTTTCATGCCCCTGGGGAAACTATTCATGGATAAACAAAATCTCAGTTTGCAGAGACAAAAACAAAGTTGGAGCTCATAAAAGGAAATAACTTAGTGTTC--TGTAAATAA chr4 + 94230402 34393967 34393966 34394266 34393967 34393966 34394266 300 GAGAAAAACTTACATTTTCCAGGTTTAGCTGGGATTCGGATAACAGTGGGTTTCCGTGCTAAAGCTGGTTGAGCTGCCTGTTCCTTTGCCGGTTCGATTTTGGGAAGAAACTGGAATGGATCTATAAGGGAAAAAACCCAATATATTTAAGGTTTACTGGCTGAACGTAAATCTTACCAGCTACTGCATTAGTTACTAAGGACATTAATATTTCACATCC---AAGAAAGTA-------ATAAAAAATAAATCTGTTCCCGGGGACAAACACCGGGCT----------AATGTGAATAGAGTAGAGCTCTTTGTAAATAA .....:x:............x.....:.....:.....:..x........:....xx.:x::x.........:....::....:...:::.....x:....x.x.:.:.:...:..x.......----:x:......x:.:.x.....x:x:.x.x:.:.:.:.xxxx:.x.xxx..x.:xx..:x....x:.x.:.x.:..xx:xx..x.....:::..---::....x..-------.....x..x.xx..x...:x.:.:......x..x::.:.----------..x.x:....:xx...x.:..--......... 124M4I92M3D9M7D39M10D21M2I9M 190/294 64.6% 300/94230402 0.0% 26/294 8.8% 116771609 73442946 +26856 chr4 + 190214555 151174722 151174721 151175679 958 GGGCAAAACATCATCATCAAAGCTGATGAGATCGATGTCCACCAAGG----GCTTGCTCTGCAGAACTGGAACTGGGGGGTTGGCTGGGGG---CCCTTCTCCCAGTGACTTGTATGCTTTGGCTTGTGATGCCCCTGCGAGTCGGGGAGGAACAGTGACAGGTTTCAGTGGAGCTGAAGGGTAGGTGGGGTTTTCTGAGGAAACAGATTTCTTCAGCAGCAAAGGCCGCGGGGCAGGAGTTGGCACTTTCTTCCCACTATCAGAGCTCTCAGCCAGGGGCCCTCTTCCCG------GAATCTCAGGATTAACACTTCGTATAAGGCCAGGGTTTGGTTTCTTTGGCAATTCAGGTTTGGTTACTGGGATGCTTCCCGCTTCTTGCAGGGGAGGGTATGGGGTGAGTCCTTCCTTGGAGGTCACCTTGAGTCTGTTCTCAGTCCCAGAGTCCCACTCTCCAGAAGCTCTGTTAGCAGCTGGTTTGGGAGCTACAGAAGGTTTCCCTGAGGAAACAGTAGGCTTTGGAGGAAGTGAACGTGGAGTAATTTCTGGTTTCTTGGGCAGTCCTGAGGTTTCTATGTTTGTCTGACCCTCAAACACTTTAATTCTGGAAACAATACTATTTTGGCTTTGTTCTGTGTTCATAATGTTCATCACTGCCTGACTGTCTGAGGTGCTAGCGTTGTCCAGCAGAGACTGGGGCCGGCCTGGGGATGACT-CCTCTCCTACGGCTGCTGGGCTGATTTTCTG-TTGACTTTGCTCTTTAATGTG------AGAATCTCTGGGTATTGGTCTGAGGTTGCTTTTTGATCTTGGTTTTGGCACTGGACATCTTGTAGCACTGGGGTTTTCTGGACAATTCGGTTCTTCAGAAATATCAAAGACGATTAAAGGTGCCACATTTGTTGGAAGATTGCCAGACGAGACTGCTGAGAAAGGCTGAAGAGGCTTGAGAGGTGCCTGTAGTGCTGAC chr4 + 94230402 34402328 34402327 34403282 34402328 34402327 34403282 955 GGGCAAAACATCGTCATCAAAACTGATCAGATC----TCCTCCCAGATCTAGCTTACTCTGCAAAGCAGGTGCTGAGGAGTTCTCTGCGGGTGACAATTCCCCCAGAGACTTGAAAACTTTTTCTTGGGCTGATACAGAAGTCCGTGGTGGAGCAGAGATTGGTTTCAGAGGGACCAAAGAAAGGGCAGGATATTCTGCAGAATGTGACTTTTTAGAAATAAGAGGCCTCGGAGCAGGAACAGGAAACTTTCTTTGTTCGTTGCTGTTCTCTGCCACTGAGCTGCTTTTTGCATTGAGAAAATCGCTACTACTACTTTTTACAAGGCCAGGTTTTGGTTTCTTTGGCAGTTCAGGTTTGGCTACAACACTACTCCCAGCTGCTTCAGGTTGAAGCTGCAA---------TTCTCTGGAGGAAGGTGTTGGTTTGCTTTCTGTCCATGCATCCCAGTCTCCTGAAACTCTGTTTACCCCTGGCTTTGGAGCAACTACTGGCTTCTTTGCAGGTACAG---GTCTTGTGGCAAAGGAACGAGGGGCAATTTCTGGTTTCTTTAATAATCCTGAGGTATCATTAGCTCCTTGGGTTTCAAAAACTTTGATTCTTGAAACAATACTACTTTGGCTCTTGCCTGTACTCATGCTGTCCACTGTCACGTGATTGTCTAGTAAGCTA---TCATCTAAGACAGATGACTGCTGAACTGGAAGTTGCTGCCTCTTCG-----TGTCAGACTGGTTCACTTCTTCCCCATTCTCTCTTATCTGACTTCCAGTATTTTTGACCAAAGGTCTGAGATTGCTTCTTGATCTTGGCTTTGGTACAGGACATATCACAGCATTGGGATTTTCTTGGCGCCTTTGACCTTCAGAATTTTCACGAACTATTAAGAAAGTCTCATTTTCTGAAGAAGATCTGTTCAAGAGAGATGCAGAAGGCCTAGGAGGTTTCAGGGGACTCGGTCCTGCTAAC ............:........:.....x.....----...x..x..:----....:.......:.:.x..x:...:..:...xx...x...---.xx...:.....x......x.x:....xx....x.x..x:x.x.x::x:..x..x...:...x..:x........x..::.::...::x:..::..:.x.....x:...xxx..:..:..x::x.xx.:.....x...:......::x..x.x:..::.::xx:::.::xx.:....x....xx.:x.:x...:::.------...xx..:xx.:..x:....:x..:.........x................:...........:...x:x:x.:..:..x...x...xx:.xx..:.x.::::---------...::......xx:x:x.x:..:..:.:..x....xx.x:.....x.....x...:.......x:.xx....:..x.....x..x:xx..:...::..x:.:x....---.::...x:.x..:x.....x..:.:...............x:::.:.........x..xx.:x:.x::..:x::.....x.....:.....x............:.......:.xx:....::....:x...:..::::::.x...:.....::x:x....---.::..:.:x.x...:x:xx..:.:x....:::.x:..-.....:.x-----..:::.:...:..:x..x-..xx.:x.x....:.x..x..------..x..:.:..:x:.xx........:......:..........:.....:..x......x.:::....:....:......x.:.:x:.:x.x:........x.x...x::..x.....:::x.:.x.....x:..:.::.xxx.::xx.:...xx.x..x::.....:x.:....:..x..:..xx:.x..xx....:.. 33M4D10M4I40M3I197M6I103M9D107M3D161M3D37M1I8M5D18M1I21M6I199M 596/934 63.8% 955/94230402 0.0% 45/934 4.8% 116772394 73442161 +12449 chr4 + 190214555 151176525 151176524 151176959 435 TTGCATTACTTTGAGGCAGATCGTTGTCTATTTCTTCTGAAAAGTCAGTCTGAGTTGCAGAAGTAATAGTGTGCCTTGGAGTAGCAGCAGCATTATTATTATTTGTAGTATTAACTTGAACTTGGTTGATTTCTTTTATAACTTGTTCATAAGATGGTGGGAGCTGAAAAGTAAAGA-------------------------------ATGAAGATTTTAGACATCTAAGGGCAAT-AGCTAAGGTGTTGA---------CAGTCTCACTGTTCTTATCTTCCAATTTCATTTAAA-------AAATAAAATGCAAAGAGATAA-----------------------TGTAATGTTTAT------------------------------TCACCTCAGCAGGAACCAGCTCATTAGGCCTCCAA-GAGCCTGCTGCAGATGATGT---AGGAAATCCCAGTCCTGGGGGTG-----GGGTT----CCTGGAAACCACGAGGCTGGCCTCAGTGGCTCAGCTGCCACAATGGTGATCTCTGGGCGCCTAG chr4 + 94230402 34404242 34404241 34404781 34404242 34404241 34404781 540 TTACATTACTTTCTGGCAAATGGCTGATTAATTCCTCTGGAAAGTCAGTTTGTGTTGCAGAAGTAGTGGTATGTCT---AGGAGCAGCAGCATTATTGTTATTTGTTGTATTCACTTGCACTTGATTTATTTCCTTTATCACCTGCTCATAAGACGGAGGAAGCTACAAGACAGAAATATTGATGCATGTCTAAATTTGACCTTTTTTAGAAAAAGCATATATGTTTTAAAACACTAAATTAACATGCAGAGGAAAAGAGCACTATCATAGTTTT--TTATTCAATGTCACAAAAACCTAAGCAAGTAAAATTCTTAGTGATAAAACTTTCTCTCTCCTTTTTTTCTTTTAACCTTCATATGTCAAACACAGTTCATGTAAATCCATGCTCACCTCGGCTGGAAGAAGCTCATTTGTCCTCCACTGAGCATG----AGGTGAAGCAGAAGGGAATCCTAATCCCTGAGGAGCAACAGGGCTTGCACCTGGAAACCAGGAGGACGGCCGCAGGGGTTCAGCAGCAACTATTGTAATTTCAGGACGCCTAG ..:.........xx....:..x.:..x:..x...:....:.........:..x............:.:..:..:..---..x...............:........x.....x.....x.....:..x.....:.....x..:..:........:..x..:....:x..:::.:.:.-------------------------------.x:..:.x:x..x.::.:.x.:::..x.-.::...x:..:x..---------..x.x...:x...:.--.:x.:....x...:xx...-------..:......x.xx..x.....-----------------------.x...:x..:..------------------------------.......:..x....xx........x.x......x-....x..----..:...x.:---...:.....:.:...:x.:..x.-----...:.----...........x....x:....x...x..:.....x..x..x..x..:..:..x..:....... 76M3D98M31I28M1I14M9I15M2D19M7I21M23I12M30I35M1I7M4D9M3I23M5I5M4I64M 313/426 73.5% 540/94230402 0.0% 123/426 28.9% 116772283 73442272 +3544 chr4 + 190214555 151179335 151179334 151179416 82 CATTATAAATA---TAACCATACCTTCTATCTCGATGAAGTTCACTCTGAATAGAAGTCCGAGAAGCTGTTGA---AGAAGGAATAAA chr4 + 94230402 34406045 34406044 34406132 34406045 34406044 34406132 88 CAATATAAATAATTGCATCCTACCTTCTATCCCTCTGCTGTTCACTATGGCTAGAAGTCCGAGAAGCTATTTAAATAAAAGAAACAAA ..x........---xx.:.x...........:.xx..xx.......x..:x.................:..x.---.:...:..:... 11M3I59M3I12M 64/82 78.0% 88/94230402 0.0% 6/82 7.3% 116773290 73441265 +8057 chr4 + 190214555 151181632 151181631 151181804 173 CTGAAATCAGCAGGGATAACACTTTTAAAAGACTTCATGTTATCATCACAAACATACCTCTTCCACGGGGCATTTTTGCTGTGTACTATTCATGAGTGCTAAGGGAAAAAAAGAAGGGGTTATAGAAGAGGAAAGGAAGAGAAAAGAG--TGAACCTAGTTGCCTAAGCTTTAAA chr4 + 94230402 34406763 34406762 34406937 34406763 34406762 34406937 175 CTGAAATCAGTAAAGCATACTTGATTTGAGCATCACACACTGTTATGTCAGACATACCTCTTCCACGGGGCATTTTTGATGTGCACTATTCATGAGTACTAGAGGAAAAAAAGAAGGGGTTACAGAAAAGGAAGAGGAGGTGAAAGAGAACAAACCAAGGCTCCAGAGCCAGAAA ..........:.::.xxx..x:xx..x:.:x.::x..:::.:.:..xx..:...........................x....:.............:...::...................:....:.....::.:..:x:......--::....x..x:x..x:...:xx... 148M2I25M 124/173 71.7% 175/94230402 0.0% 2/173 1.2% 116774869 73439686 +5926 chr4 + 190214555 151187400 151187399 151187501 102 AGAGAAGGAAAAAACAAACTTACATCTCTTGATTACCGCTCTAATGGATGACAAGGGTCCTTGGCTAGAAAAAGAAAGAA-AACTTATTATACATTCATTAAT chr4 + 94230402 34412952 34412951 34413054 34412952 34412951 34413054 103 AGAAGAAGGAAAAACAGACTTACATCTCTTGATTGCTGCTCTTATGGATGACAAAGGTCCTTGGCTTAATAAAGAAAAAATAAATGATTACTCAGTGGTTAAT ...::.:.:.......:.................:.:.....x...........:...........x:.x.......:..-..x.x....:x..x.x:..... 80M1I22M 82/102 80.4% 103/94230402 0.0% 1/102 1.0% 116774448 73440107 +3098 chr4 + 190214555 151195346 151195345 151195410 65 TGGTGGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAA chr4 + 94230402 18047927 18047926 18047991 18047927 18047926 18047991 65 TGATGAACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAA ..:..:.....:::.xx..:.x...:............x........xx:....x:.x:...... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 133147419 57067136 +3066 chr4 + 190214555 151202196 151202195 151202264 69 GTGGTGGCACACACCTGTAGTCCTAGCTACTAGGGAAGCTGAGGCAGGAGAATCGCTTGAACTCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x......:.:.......x.::.:......x.xx.x...x.:.......:...:.. 6M5D58M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% 75168995 NA +3602 chr4 + 190214555 151211130 151211129 151211199 70 CGTGGTGGTGCATGCCTATAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........:.--.:..:.:.........:..:........x.xx.x...x...........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 75177933 NA +3405 chr4 + 190214555 151213517 151213516 151213587 71 CACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAAACTGCTTGAGCCTAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:...........::........x:xx.x:..x::.....:..:..:..x.:x:.....:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 75180310 NA +3012 chr4 + 190214555 151222650 151222649 151222685 36 CTTTGGTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847282 45847281 45847317 45847282 45847281 45847317 36 CTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ....x:.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 105375368 84839187 +3149 chr4 + 190214555 151222652 151222651 151222692 41 TTGGTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 17384409 17384408 17384449 17384409 17384408 17384449 41 TTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAGA .................:.:................x.x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 133838243 56376312 +10666 chr4 + 190214555 151226040 151226039 151226578 539 TTCATACCTTGAAGAACGATGTTCTGGTTTATTTCGTTCGTTGCGATCTGTAGAGAAAGAAG--ATGGTTACGTGTCAAAA------GGTTCTTTAAAAGCTCTGGAAAGAAGTTTTTAAATACCAGCTGCCATACCATTAGATTTCACAAAGGACTGTTCAAAGGTAGTTGTGTCTTCCTAAGTATAAGGCTCTTCATCACAGTTCGCCTGA-CAGAGGCAGAAAAGACACAATGAAGGACAGGCATAAAAGCTTACGGTTTGTTAAAAT-CATCTACTTGGAAAATGCATCATTACATGCATTATTTCATT-TTATAAGATCTTTCCTGTGCTAAATACTTTGCTAACACTAGAAGAGATTTAGCT-------------AAGGAAAGAAAGCAAGGAAACTGCAAAGCCACAGATTACTCAGCTCAAAAAAATCATTCCATGAATCATGGTTGGCAGAAGCTTCTAACAGAATGGGGAGGGGGAAAAATGAGCAGTCAGCT---ACAACATCTGCAAAT--ACTAAGACCAATACAGCTTCACCCTTAACTATCTACCACCCAGAA chr4 + 94230402 34432196 34432195 34432723 34432196 34432195 34432723 528 TTCTTACCCTGAAGAGCGGCAGTCTGGTTTATTTCTTTCAGAGCGATCTGT-GAGAAAGGAGGCACAGTATCAGCACAAAACTTGGATGTTCTTTAGCAGTACAAGCACAAAAGTCTTACAAG--AACTGTCACACCATATGACT-AGCAAAAAAC----AAAAGCTGGTTCTGTC---------ATAAAACTTTC--TCTAAACTGGTCTATTCAGTTGGAGAGAAAGTAAAATCACGGC---------AAATTTAATGTTTGCTAAAATTCCTCTATCCAAAACAGAGCGCACTTAATGTTTTACATAAGTGCTTTAGAAGCCTTCCCTCCCT------TTAGCTAAAATGAATAGGATTTTAGTTTACGGTAAAAATAAGGGAGGGAGAAGAGGAAAAAAGAAAAACCACAGATTACTCAGCGCAAAAAAATCATTCCATGAATCACAGCTGGCAGAATTCCCTAACAGGAT-----GGGAGAAAAATCAGCAGCTGGTTGCAGCAACATCTGCAAATACACTGAATGCAGTGCAGC-CCGTCATTAACTCTTTCACTTCTGGAA ...x....:......:..:::x.............x...:xx.........-.......:..--.::..xx.:xxx.....------x........:x..:x.x:.x.x:..:x.:...x.x:--.:...:..:.....xx..:.-x:....::..----x....x.:...x....---------....::..:.:--..xx.::.x.:..:x-...xx.x...:..:::.x...x.x..x---------..::...xx.....:......-.x....:::::..x.x:xxx..:.xx...:x...:x.x.x.-:.x..::.x.:....:x:x..------..x.....x.:x.:x..::x.....:.-------------.:...::..:.:x.:.:...xx.x...:................x.......................::.:........x:::.......:..-----...:.......x.....:::.:.---:..............--...:.:xx..:.:....-:.::.x......x.:.xx.x:.::... 51M1D10M2I17M6I36M2D20M1D10M4D16M9D11M2D15M1I27M9D21M1I41M1I21M6D27M13I94M5D23M3I15M2I17M1D27M 334/499 66.9% 528/94230402 0.0% 69/499 13.8% 116793844 73420711 +3438 chr4 + 190214555 151235650 151235649 151235728 79 GTGGTGCACATCTGTAATCTCAGCTACCTGGGAGGCTGAGGCATGAGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:.--...:.::.......:..::........x.x..x...x::........x:.:..x.xx:..:..:.. 11M2D66M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 75202449 NA +3740 chr4 + 190214555 151240272 151240271 151240353 82 ACAGTGGCACGAGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCCCTTAAACCCAGGAATTCAAGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......::.:x.--......:...........::........x.xx.x.:.x.x...:.......:.::.:x:.....:.. 13M2D67M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 75207074 NA +3225 chr4 + 190214555 151248109 151248108 151248160 52 TTTTACTTTTTTTTTTTTGTTTGTTTGTTTTTGTTTTTAGAGATGGGATCTT chr4 + 94230402 42184859 42184858 42184910 42184859 42184858 42184910 52 TTCTGTGTTTTTTTTTTTGTTTGTTTGTTTTTAATTTTAAAGGTTGTATCTT ..:.::x.........................:x.....:..:.x.x..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 109063250 81151305 +3135 chr4 + 190214555 151250406 151250405 151250447 42 ATGAAAATATATACATATTTATATATATGTGTGTGTATATAT chr4 + 94230402 88298984 88298983 88299025 88298984 88298983 88299025 42 ATGAAAATGTGTATACATTCATATATATGTGTGTGTATACAT ........:.:..:.:...:...................:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 62951422 NA +3106 chr4 + 190214555 151253703 151253702 151253785 83 TGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAACAAGAAAACAACAACAACAACAACAACAAA chr4 + 94230402 81964155 81964154 81964237 81964155 81964154 81964237 83 TGTACTGTAGAGAGACTGACAGAACAAGTGTTCCTCATTAAAAAAAAATCAAACAAAACAACAACAACAACAAAAACCCTAAA ..:...x:..xxx.:x:......:.:..xx.:.x..x:x.........xx......:.x..............x...xx:... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 69289548 NA +3069 chr4 + 190214555 151253733 151253732 151253790 58 TCCGTCTCAAAAAAAAAAAAAAACAAGAAAACAACAACAACAACAACAACAAAAAAGC chr4 + 94230402 46784404 46784403 46784461 46784404 46784403 46784461 58 TTTGTTTAAAAAAAAAAAAAAAGCAACAAACCAACAACAAATCCCACAAGAAAAAAAC .::..:.x..............:...x...x.........xxx.x....x......:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 104469329 85745226 +3197 chr4 + 190214555 151253739 151253738 151253790 52 TCAAAAAAAAAAAAAAACAAGAAAACAACAACAACAACAACAACAAAAAAGC chr4 + 94230402 49372039 49372038 49372090 49372039 49372038 49372090 52 TCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAAC .........x...x...x..x..x......:..:.........x......:. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 101881700 88332855 +3275 chr4 + 190214555 151265551 151265550 151265597 47 ATTTATTTTATTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTAAAG chr4 + 94230402 34387721 34387720 34387767 34387721 34387720 34387767 47 ATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTTAAAG .......:.::.x....x........:....:............... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 116877830 73336725 +3064 chr4 + 190214555 151265556 151265555 151265605 50 TTTTATTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTAAAGACAGAGTC chr4 + 94230402 64139565 64139564 64139614 64139565 64139564 64139614 50 TTCTATGTATTTTCCTTTTTTTTTTCTTTCTTTTTTTTAATGAAAGTGTC ..:...x.x.....:..........:...:..........x..x..x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 87125991 NA +3509 chr4 + 190214555 151273450 151273449 151273532 83 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGTGAATCGCTTGAACCTCGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--......:.........:.::........x.xx.....x.:........:x.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 75240253 NA +3313 chr4 + 190214555 151277912 151277911 151277983 72 GCACCTGTAGTCCCAGCTACTCAATAGACTGAGGCAGGAGAAGTGCTTGAGCCTGGAAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::.x..:.....x.xx.x....::.....:..::...:x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 75244706 NA +3367 chr4 + 190214555 151280661 151280660 151280733 73 TGCACCTGTAATCCCAGCTACTCATGAGGCTGAGGTAGAAGGATCACTTGAGCCTAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::x:........x:xx:x.:.x.......:..:..:..:.:x:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 75247456 NA +3211 chr4 + 190214555 151286171 151286170 151286238 68 ACCCTGTCTTAAAGAAAAAAAAAAAAAAAAAAAACAACTAAACCTAAAGAAAATACAAAGAAGGAAAT chr4 + 94230402 5872036 5872035 5872103 5872036 5872035 5872103 68 ACCTTTTCCTCCAGAAAAAAAAAAAAAAAAAAGAGAATTAAGGTTGAAAAAAATATATAAAAATCAAT ...:.x..:.xx....................:.x..:...:x:.:..:......:.x.:..:xx... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 145414135 44800420 +3244 chr4 + 190214555 151309863 151309862 151309932 70 ACTTGTAGTCCCAGCTACCTGGAAGGCTGAGGTGGGAGGATTTCTTGAGCCCGGGAGGTCAAGGCTATAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x......:........:..:.........x:xx.x.:.x:x.....:...:.:..x.:x:....:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 75276655 NA +3523 chr4 + 190214555 151310238 151310237 151310316 79 GTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAAGAGGATTGCTTGAGCCTAGTGGTTTAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........:.::.......:x.xx.x.:.x::.....:..:..x:.:..x:.....:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 75277037 NA +3062 chr4 + 190214555 151310565 151310564 151310623 59 TCACTCTCTCTCTCTCTTTTTTTTTTTTTTAGACTCTTGCTCTGTTGCCCAGGCTGGAG chr4 + 94230402 65137713 65137712 65137771 65137713 65137712 65137771 59 TCCCTGTTTTTCTACCTTTTTTTTTTTTTTGGATTCTTGCTCTTTCCCCATGACTGAAG ..x..x.:.:...x:...............:..:.........x.:x..xx.:...:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 86172852 NA +3265 chr4 + 190214555 151311256 151311255 151311338 83 CATGGTGGTGAGCACCTGTAGTCCCAGCTTCTTGAGATGCTGAGAAAGTAGGATCACTTGAGCCCAGGAGGTCAAGGATGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x......:......x.....:.x......xxxxxx.:.x.......:.....:..x.:x:..x..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 75278059 NA +3137 chr4 + 190214555 151312953 151312952 151313018 66 GTGGTGAGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTATGGGAATCACTTGACCCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x::.--....:.:...........::........x:x..x...x.......x..::.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 75279752 NA +5788 chr4 + 190214555 151325149 151325148 151325442 294 GTGAAGGAGCTGCCGCTGTGTGG---GGCAGGACCCGAGCGGCCCCAGAGCGCGCAGCTCTGGGTCCCCGCCGCCCCG---TCCCCCGCGCCTCTCACCTGCGGCCGAGTGGCCCGAGAGCGCACGGCCCCGGGCGCGGCGCTGGCCACCAAGTTCGCGGCGCTCGCGTAGCTCTTCCTCCTCGTCCTCCCGCCGCCGGCCCTCAGCCATGGGCGAGGCGCGGGGCGCAGCCG---------------CGGG-------ATGGCCAGCGAGCTGCGGCCCCGGCGC--CCCAGAACGCC---TGCACCCGGCGCCCCACGCCACCGC chr4 + 94230402 34449974 34449973 34450269 34449974 34449973 34450269 296 GCGGAGAGGCTATGGCTGCTCGGCCTGGCAGTCCCCAAACGGCC---GATGCTTCAGCCCAACGCCTCGTCTTCCCCAGACCCCCTCCCGCCCCTCACCTGCTGCTGAG------------------CCCAGGGCCCGGCGGTGCCTCCT------GCCGAGCTCCCGCAGCTCCTCCTCGTCCTCCTCCAGCCTCCAGGCTTCGGCCATCGGCGAG----GGGGCGCGGCCGACGCTGCTCAAAGGCCGGGGGCTACCATGGCCGGCCGGGGGCCTTCCCGCCCCTTCCCAGGACGGCGGGGGAGGCCGGCGCCTTTCCTCAGCGC .:.:..::...::x....:x:..---.....xx...:.:.....---..xxx:x....:.x:x.:.:.xx.:x....:---:...:.x....:.........x..:...------------------...x....x.....x..x.:x.:------..x.x....x..:.....:.....x..x......x...x..:.x.:..:.....x......----.......:....---------------....-------......:..x:.xx..xx:....x.x.--.....:...x.---x.x:x........::x.x:..x... 23M3I18M3D31M3I28M18D23M6D61M4D12M15I4M7I27M2I11M3I25M 183/263 69.6% 296/94230402 0.0% 64/263 24.3% 116875175 73339380 +3586 chr4 + 190214555 151348766 151348765 151348848 83 CGTGGTGGTGGGCACCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAAGAGAATCGCTTAAATCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:...........::::........x.xx.x...x.:...:..:.......x.xx:..:..:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 75315569 NA +3324 chr4 + 190214555 151348934 151348933 151349012 79 GTGGTGAGCACCTGTAGACCCAGCTACTTGGGAAGCTGAGGTGGAAGGATCACTTGAACTCAGGAGGTCAAGGCCGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x.....x:...........::.:......x:xx:x.:.x.........:...:..x.:x:...:.:.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 75315733 NA +3046 chr4 + 190214555 151349069 151349068 151349112 44 CCCAAACAAACAAACAAACAAACAACAACAACAACAACAAACCC chr4 + 94230402 45240839 45240838 45240882 45240839 45240838 45240882 44 CCAGGAAAAACAAACAAACAAACAACAACAACAACCAGAAACCC ..x::.x............................x.x...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 106108230 84106325 +3476 chr4 + 190214555 151352426 151352425 151352662 237 GCGCACCTGTAGTCCCAGCTACTCGGTAGGCCGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG----TGA-GCCAAG---------ATCTCACCACTACT-CCAGCGTGGTGACAGAGCAACAGTCCGTCTCACACACAAAAAAAGTTTGGTCACCAG-----TTGGAGGGGACCAACTGGT-TGCAAGTTA-----------GGACCAAAAAAGCAAGTCTGAGGGTCTCTTGGATGCCTAATCCCATTCTGAGGAG chr4 + 94230402 76033204 76033203 76033443 76033204 76033203 76033443 240 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTG---------------------CAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGACAGCGGGTCTGATAGTTAGGTCTTGTTAGGGAATAGAAAAGTTGG-CTGCAGATGTCTT-------TCATCTCATGCTGAGGAG .:....x......:.........:.:x....:...x.xx.x...x::...........:..x:xx:..:..:..----...-......---------::.::.xxx..:..-.....:.......x.---------------------..:.:.:xx.xx......x..-----:..::.:.::x..:.x...-..xx.....-----------...x:.:.....:x:.-...x:.:.x....-------.x...:...x........ 74M4I3M1I6M9I14M1I15M21D21M5I19M1I9M11I16M1D13M7D18M 144/208 69.2% 240/94230402 0.0% 61/208 29.3% 75319222 NA +3064 chr4 + 190214555 151358123 151358122 151358173 51 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA chr4 + 94230402 4618357 4618356 4618407 4618357 4618356 4618407 51 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA .::.x.......::..............x:....::......x.x...... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 146739766 43474789 +3158 chr4 + 190214555 151358130 151358129 151358179 50 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATGCA chr4 + 94230402 60831530 60831529 60831579 60831530 60831529 60831579 50 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCA ...x.....x.............x.:.......:.:....:.:.:.:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 90526600 NA +3350 chr4 + 190214555 151374006 151374005 151374099 94 TATCACCCATTTTCTCCATTATATATGTATGTATGTATGTATGTGTGTGTGTGTGTGTGTGTATACATATCCATTATCATTAGTTTATATTTTT chr4 + 94230402 54991975 54991974 54992068 54991975 54991974 54992068 94 TACCATCAGGCTTCTTCCTTACCTATATATTAATTGATTTTTATGTGTGTGTGTGTGTACGTATACATACCAAGTTTTGATATTTGTTATATTT ..:..:.x:x:....:.x...:x...:...xx..xx..x.x.:...............::.........:.x.x.x.::x..x..xx...x... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 96382031 93832524 +3396 chr4 + 190214555 151379785 151379784 151379843 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGTACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x.:....x......:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 75346579 NA +3045 chr4 + 190214555 151403485 151403484 151403538 54 TGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:...........::........x.xx.x...xx:.x.........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 75370274 NA +3234 chr4 + 190214555 151412647 151412646 151412719 73 CCTCCCTTCTTTCTTTCTTTCTCTCTCT----CTCTCTTTCTTTCTTTTTTTTTTTTTTTTGATGGAGTTTTGCTCT chr4 + 94230402 61949729 61949728 61949805 61949729 61949728 61949805 77 CCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTT ...::.x.x:.:.x.:...x:...:..:----..:::...........:............::....x....:..:. 28M4I45M 52/73 71.2% 77/94230402 0.0% 4/73 5.5% 89462918 NA +3451 chr4 + 190214555 151418051 151418050 151418132 82 AGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTCAGCTCAGGAGTTTGAGGCTGCAGTGACACAGGATGATGTCA chr4 + 94230402 76033214 76033213 76033289 76033214 76033213 76033289 76 AGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:...........::........x.xx.x.:.x.....x.:.:...:..:..x:.....:..------.:x......:.. 64M6D12M 56/76 73.7% 76/94230402 0.0% 6/76 7.9% 75384837 NA +3116 chr4 + 190214555 151446451 151446450 151446506 56 CTTTCCTTTCCTTTCCTTTTCCCTTTCCTTTTCCTTTTTTTTTTTTGCAGGATTCA chr4 + 94230402 51227415 51227414 51227470 51227415 51227414 51227470 56 CCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTTTAGAAGAAATTA .:.:::..:.......:........:.....:.:.....:.....x.x..:.x.:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 100219036 89995519 +3078 chr4 + 190214555 151452938 151452937 151452988 51 ATATATATATATATACATACACACACACACACACACACAAACATACATTGA chr4 + 94230402 85078510 85078509 85078560 85078510 85078509 85078560 51 ATATATACAGATATCTATATATACACACACACACACACTAAAAAGCATTGA .......:.x....x:...:.:................x..x.x:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 66374428 NA +3050 chr4 + 190214555 151486954 151486953 151487008 55 GCAAAACTCCATTTAAAAAAAAAAAAAAGAAAAATATTTTCTTGCTTACTATATA chr4 + 94230402 8166995 8166994 8167049 8166995 8166994 8167049 55 GCAAAATTCTGCATTAAAAAAAAAAAAAGCAAAATATTTTCTTAGCTTCTATTTA ......:..:::x.x..............x.............:x:.x....x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 143319959 46894596 +3079 chr4 + 190214555 151492461 151492460 151492533 73 GTGCACCTGTAGTCCCAGCTACTTGGGATGTTGAGACAGGAGAATTGCTTGAATCTGGGCGGCATAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x......:...........::.x.:....x.xx.x...x::......:.::.:x.x:x.:..:..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 75459257 NA +3047 chr4 + 190214555 151509731 151509730 151509813 83 AAGTACGTTAAAAATACTGTCTCTATGT-TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTATATATACATTTAAAGAAATT chr4 + 94230402 29797113 29797112 29797191 29797113 29797112 29797191 79 AACTACGTCAGAAAT-----TTCTGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATT ..x.....:.:....-----:...::::-.x.::.:::.::..:..:......:.......:..........:x:.:....... 15M5D8M1I55M 54/78 69.2% 79/94230402 0.0% 6/78 7.7% 121712618 68501937 +3007 chr4 + 190214555 151519718 151519717 151519778 61 GTAAGAAACTGACAGGCCTGTTTTCAAAGTGGTTTTTTTATTTTACATTCCCACTCATAAT chr4 + 94230402 25864299 25864298 25864359 25864299 25864298 25864359 61 GTAAGAAATTGTTTGGCATGTTTGCAAAGTAGTTTTTGTGTTTTTCATTCTAATTTGTTAT ........:..x:x...x.....x......:......x.:....x.....:x.:.::.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 125655419 64559136 +3093 chr4 + 190214555 151521690 151521689 151521741 52 TATGTATGTATGTATGTATGTATGTATGTATGTATTTTTTTATTTATTTATT chr4 + 94230402 21228167 21228166 21228218 21228167 21228166 21228218 52 TATGGATATATCTATCTATAGATGTATGTATATATTATTTTACTTATTTACT ....x..:...x...x...:x..........:....x.....:.......:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 130293523 59921032 +8049 chr4 + 190214555 151522914 151522913 151523165 252 TGTGTTTGGTTTTGTGATCA---ATTTAGCTGTCAGGGGTTTGTGATTTTCTGAGAGCTGACTCTTGCTGCTAATGAACATGATCATTTATACACTGTCACTGTAGTATAGGCATGTTAAATAATTGATCAGGCCCTGGCAGTTAGAGAATGGCAAATGCAGTCCCTTTGTTGCTATGGTAATACATTTGGTTAGGGGGGCT----GTCATTTGGACCACATGGATCTGGCACATGTGACATAATTGCCTGTGGTTGAG chr4 + 94230402 34502937 34502936 34503186 34502937 34502936 34503186 250 TGTTGTTGTTTTCATGGCCACAGATATAGCTGTCTAACATTC---AGTTTTTCAGCACCTACTCT-ACTGTTAATGAATGTGATCATTTACACAGCGTCACTGTAGTATTGGCACGCTAAATAATTTAGTGGGCTGTGGCAGGTAGATAGCT----CTATGGTGTCTGTGTTACTATGGCAATATATTTGCTTAATGTAAATATTAGTCATTCTGACCACATGAATCTCA-GCTTCTGACATTATTAGCTGTATTTGGG ...xx...x...::..::..---..x........x::x:..:---.x...:.x..x:.:x.....-:...:.......::..........:...x:.............x....:.:.........x.x::...:x......x....x.::x----x.:::..x:..x....:......:....:.....x...:x.x::x.----......:x.........:....x:-:.x.x......x...:x....:x...:. 20M3I19M3D20M1D86M4D46M4I24M1D28M 170/243 70.0% 250/94230402 0.0% 16/243 6.6% 117019977 73194578 +3594 chr4 + 190214555 151524162 151524161 151524244 83 CGTGGTGGCACGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::.:..--....:.:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 75490965 NA +6239 chr4 + 190214555 151566211 151566210 151566370 160 TTTTAATGAAAATTAAATATGACTTAGAAGCATTGATTTATGAAGGCTT-ATGATGTCATC-------GGTTTCGACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACAGGGAGTTGACCCAGAAACATGCATGATTGTATTTAAAAACCACTGGGCACAGGTAATG chr4 + 94230402 34522170 34522169 34522329 34522170 34522169 34522329 160 TTTCAAAGGAAATTCAGCATGGCTTA-ATGTGTTGACCTTTGGAAGCTTGATAATGTCCTCTGGAACTGGTATCAGAAAAAA-------TCGGCAGGGTCTGAGCCTGCAGGGTGTTGACCCGGAAACTTGTATGATAGTGTTTACAACACACTGGGCACAGGTATTG ...:..x.:.....x.::...:....-.x.::....::.x..:.:....-..:.....x..-------...x..::x.:...-------:.:.....x.x.......:.....x........:.....x..:.....x..:....x..xx...............x.. 26M1D22M1I11M7I14M7D79M 115/152 75.7% 160/94230402 0.0% 16/152 10.5% 117044041 73170514 +3233 chr4 + 190214555 151572071 151572070 151572149 79 GTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGACTTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:...........::........x.xx.x..xx::...........:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 75538870 NA +41260 chr4 + 190214555 151577434 151577433 151578173 740 CTTGACTTGGTTACAGGTTGTGAAAATCTTGGAGAAGCACGACCCCTTGAAGAACACCCAGGCAAAATATGGGTCTATCCCTCCAGATGAGGCCAGTGCCGTGCAGAATTACGTAGAACACATGCTCTTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGGAATTTGTGGTCTCTGAGAACATCATGGAGAAACTTTTCCTTTGGAGCTTGAGAAGGGAGTTTACTGATGAGACTAAAATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTTGCTGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGGAGGAGAAGCTGGTTGTCCTACTCAATCAGCTCTGTTCCATTCTTGCCAAAGATCCATCCATTTTAGAACTCTTCTTCCACACTAGTGAAGACCAAGGCGCTGCCAACTTCCTCATCTTCTCCCTTCTGATTCCCTTCATTCACCGAGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGCATTGCTCTTCATCATGTCTCTTTCTGCTGAGAACACCATGGTGGCCCATCACATCGTGGAGAACACCTACTTTTGTCCAGTAAGTCTCTTTCCTTGGCATGTTTTCCA-----------------CTCACTCCCTTTTTTCTCTTCTGTTGCTAGTGATGAA---------TACTTTCTTACTCCCTTTTTTTCTCCCAGTA chr4 + 94230402 34523237 34523236 34523998 34523237 34523236 34523998 762 CTTTGTTTAATTTTAGGTTCTAAAAATTTTAGAGAAGCATGATCCTTTGAAAAATACTCAGGCCAAGTATGGTGCAATTTCACCTGACGAAGCCAGCACTGTTCAGAATTATGTGGAACACATGCTTTTCTTACTCATTGAGGAGCAAGCAAAGGATGCTTCCATGGGGCCCATTCTGGAGTTTGTGGTCTCAGAAAACATAATGGAGAAGCTTTTTCTTTGGAGCCTGCGGCGAGAGTTCACCGATGAGACAAAAATTGAGCAACTCAAAATGTATGAAATGCTAGTAACCCAGTCTCATCAGCCTTTGCTACATCACAAGCCGATCTTGAAGCCTTTGATGATGTTGCTGAGCTCCTGCTCAGGAACATCTACTCCAACAGTGGAAACAGAGCTAGTTGTCCTCCTGAATCAGCTCTGTTCTATAATAGCCAAAGATCCTTCCATTCTAGAACTGTTTTTCCATACCAGTGAGGACCAAGGAGCTGCCAATTTCCTCATATTTTCCCTCCTGATTCCCTTCATTCATCGAGAAGGAACAGTAGGCCAACAGGCTCGTGATGCACTGCTCTTCATTATGTCCCTGTCGGCAGAAAACAACGTTGTTGCAAACCACATAGCAGAAAACACCTATTTTTGCCCAGTAAGTTGTTCTT----GTGTGGTCTTCAGTGTTAAACTAAGCATCTTTATTCTTCTTGTCCTGTTCTGTCTTTTTTGATAAAGATGTGTTGTAATGTACTACTTCTTTTATTTCTGCTAACA ...x::..::..x:.....x.:.....:..:........:..:..:.....:..:..:.....x..:.....xx.x..::.x..x..:..:.....::.:..x........:..:...........:.....::.x.....:........x..:......x.x........x........:...........x..:.....x........:.....:.........:..x.:x.:.....:..:........x...........:..x..:........:...:.:..x........x..:......:....:..:.....:..x..::........:...................:..:.........x.:..:..x..x.....::x::....:........x..x..............:..xx.x...........x......:.......x..:.....:..:.....:........x........:........x..:.....:.................:.....:..:x..........:..:.....x......:..........:.....:..x..x..x..:....x.:.x..x..xx.:.....x.::..:........:.....:.........:x:.:.:----.::..x.:.:..-----------------:.:.:..:::..x.:..x......:x:.xx....:..---------..x.x.x:....:.:...x.....x.:.::. 656M4D12M17I37M9I31M 567/736 77.0% 762/94230402 0.0% 30/736 4.1% 117054197 73160358 +11782 chr4 + 190214555 151586594 151586593 151586814 221 TGAGAACTTTGGAAAAGCATTTATTTTGTTTTTATTTCTGAA-CACAGGTACTTGCAACTGGGCTCAGTGGTCTCTACTCTTCCCTGCCTACAAAGCTAGAAGAGAAAGGCGAGGAATGGCACTGCCTTCTGAAAGATGACTGGCTTCTACTTCCTTCTCTTGTCCAGTTCATGAACTCCCTGGAGTTTTGCAATGCAGTCATACAGGTACCAGAGCACAAT chr4 + 94230402 34528517 34528516 34528738 34528517 34528516 34528738 222 TGAACATTTGGGAAGTTAACTTATTTCTCTTCTGTTTTTGAAATACAGGTGCTGGCAACAGGGCTAAGTGGCCTCTATTCATCTTTGCCTACAAAGTTGGAAGAAAAAGGAGAAGAGTGGCACTGCCTGTTGAAAGATGACTGGCTCTTGTCACCGGCCCTTGTGCAATTCATGAATTCTCTTGAATTTTGCAATGCTGTGATACAGGTAATGGAGCAAAGT ...:x.:..x....:xxx.:......:x:..:.:...:....-:......:..x.....x.....x.....:.....:..x..::...........:.:.....:.....x..:..:...........x:................::.:::x..xx.:.....x..:........:..:..x..:...........x..x.........x::.....x.:. 42M1I179M 166/221 75.1% 222/94230402 0.0% 1/221 0.5% 117058077 73156478 +7721 chr4 + 190214555 151588803 151588802 151588935 133 TCTTTGCCTTTTTCATGCCTATGTGCCTCTCTCTCAGGTGGCTCACCCCTTGATTCGAAATCAGCTTGTCAATTACATTTACAATGGATTTTTGGTACCAGTCTTGGCTCCTGCTCTCCATAAGGTCAGTGAT chr4 + 94230402 34531297 34531296 34531427 34531297 34531296 34531427 131 TCTCTGTCTTTCTCTT--CCATCTCTCTTCCCCTTAGGTGGCACATCCCTTGATACGTAACCAGCTGGTGAATTACATCTACAATGGATTTTTAGTGCCAGTAATGGCTCCTGCGCTCCATAAGGTCAGTGGT ...:..:....:..x.--.:..x.x:..::.:..:.......x..:........x..x..:.....x..x........:..............:..:.....xx..........x................:. 16M2D115M 105/131 80.2% 131/94230402 0.0% 2/131 1.5% 117057506 73157049 +3323 chr4 + 190214555 151591048 151591047 151591107 60 TTAATTAATTTTCTCCCTGTTCTCTGTCTGTTTTTTGTTGGTTTGCTTTTTTTTTTTTTA chr4 + 94230402 67661293 67661292 67661352 67661293 67661292 67661352 60 TTAATTTATTCTCTCCCTCCCCTTCTTGTGTTTTTTGTTCATTTGCTTTTTTGTTTTATA ......x...:.......x::..::x.x...........x:...........x....x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 83929755 NA +3261 chr4 + 190214555 151607991 151607990 151608074 84 ACTTTTGATTTTCTTTTTCTTTTTTCTTTTCTTTTTCTTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGCGTCT chr4 + 94230402 84866856 84866855 84866938 84866856 84866855 84866938 83 ACTCATGATTTCCTTTTGCTTTTTTTTCATATTCTTC-TCATTGTTCTTTCTGTGTTTTTTGTTTTGTTTTTAACTTTGCATTT ...:x......:.....x.......:.:x.x..:...-.:x..x......:.x.x......x....x.....:.xx.x..:.:. 37M1D46M 60/83 72.3% 83/94230402 0.0% 1/83 1.2% 66741135 NA +10113 chr4 + 190214555 151627123 151627122 151627516 394 GTATGATCTGTTTATAAAAATAGGCAACTTAATGCTTAATGGACTTGGGTTTTTAATATTTATAGCATGTTATATAAATGCTGTCCCTCCAAGTGCTTTCTTAAATCCTCTTAGCTTATAAATGACAGCTTTGA---TTTCTAAAAAGAAATGAAATATTTTCATTTATCCAGCCTAACAGTAGTAAACAATAGATACTTAATGCCCTCCTTTCATGTTAGCCCTCAAAGACTGAGACTTGTAGTCTAAGGAGTTGATTGCTGTGCTTTCAAGCTTACTAAGGTCATGTGTAAC-----TTAAGGGGGGAAAAGCTGATGCTACATTA-------TTGGTGCAAAGG------CTGGAATTCTGTATAACATGTCAGTTCAGCAGTGTTCCATAGATAAGCT--GAAAATATTGTGT chr4 + 94230402 34541872 34541871 34542264 34541872 34541871 34542264 393 GCATGACATTACTGTGAGTGTAGCTAACGTGCAGCACAACGGAACAGGGATTTTAATATTTACGGTGTGTTACGTAAGTGCTGCCCTTCTGAGTACTTTC-TAAATCCTCTTAGTTCTTAAGTGACAGCTTTGATTCTTTTTTTTAATAAAATCAGTCCTTTCATTTATCCGG-CTAAGTTTGATAAACAAAAGATGTTTAATA-CTTCCTTTCATAT----------AGACAGATTCTTGTA-TTTAAGG-GTTTATCTTTGTACACTTAAGCTTATTAGGCTCCTGGGTAACTATTTTTAAG-------AAGCTGACTTTGCAACAGCAGTGTGTGGTGCAGAGGTGGCCTTTGGAATTCACTGTGCCTTACCAGTGC-GTACTG-GCAATAGCTAAGCTCCAAAAGGATTGCAT .:....:x.xx:.:.:.:x:...x:...x.:xx..x:..:...x:x...x............::.::.....::...:.....:..:..::...:.....-.............:.:x...:............---...:.xxx..x...xxx.:.x:............:.-....xxx.::.......x....::.....:-.:.........:.----------....x..xx......-.:.....-...x..:x:...:.x:.:.......:..:.x..x..x.....-----.....-------.......:x:.:..x:.-------x.......:...------:........xx.:.:x.x.::....x.-.:.x..-x.x....x......--:...:x....::. 100M1D33M3I36M1D30M1D13M10D15M1D7M1D42M5I5M7D17M7I12M6I27M1D6M1D14M2I13M 262/370 70.8% 393/94230402 0.0% 47/370 12.7% 117085251 73129304 +11895 chr4 + 190214555 151629676 151629675 151629880 205 TGTGCTCACTC-CGTTGTTTGTCC---TAGGTGACTGTGGAAGAGGTCATGACCACAACTGCATATCTGGACCTTTTCCTGCGTAGCATCTCCGAGCCAGCACTACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAATCAACACCCCGTTTCGGGTAAGGAGAGC chr4 + 94230402 34542901 34542900 34543109 34542901 34542900 34543109 209 TGTTCCCATTTACCTTATTTTTCCCTGTAGGTGACGGTGGAAGAAGTGATGGCCACTACGGCATATCTGGATCTCTTTTTGCGTAGCGTTTCAGAGCCAGCCCTCCTCAAGATTTTCCTCCGTTTTATTCTGCTGCACCGACATGAGAACGTGCACATCCTAGATACACTTACTAGCCGAATCAACACACCATTCCGGGTAAGATGAGC ...x.:..:.:-.x..:...x...---........x........:..x...:....x..x...........:..:..::........:.:..x........x..x..::....:..............:..::......::..:.....:..x...........:..x..:..x..:...........x..:..:........:x.... 11M1I12M3I182M 162/205 79.0% 209/94230402 0.0% 4/205 2.0% 117086775 73127780 +6870 chr4 + 190214555 151638659 151638658 151638760 102 GTGTCTCTTGCTTCCCAGCTTTGTGTGGTGTCTCTGGCATTATTCAGAACTCTCATTGGTTTACATTGTGAAGATGTGATGTTACAGCTAGTTCTAAGGTGA chr4 + 94230402 34546875 34546874 34546976 34546875 34546874 34546976 102 GCATTTATCATTTTCCAGCTCTGTGTGGTCTCCTTAGCATTGTTCAGAACGCTCATTGGCTTGCATTGTGAAGATGTGATGTTGCAGCTAGTTTTAAGGTAA .::.:.x.:::..:......:........x..::.:.....:........x........:..:....................:.........:......:. 102M 82/102 80.4% 102/94230402 0.0% 0/102 0.0% 117091784 73122771 +11540 chr4 + 190214555 151646547 151646546 151646728 182 TGTCATTCTAGGTATCTGATCCCCTGCAATCACATGATGCTGAGTCAGAGGTGGGCTGTGAAGGAGAGAGACTGTTACTCTGTTTCTGCGGCCAAGCTTCTCGCCTTGACTCCTGTCTGCTGCTCCAGCGGGATCACTCTGACGCTGGGGAACCAAGAGAGGGATTATATTCTCTGGTCAAA chr4 + 94230402 34548391 34548390 34548572 34548391 34548390 34548572 182 TGCTGTTTCAGGTATCTGATCCCATGTAACCACATGATGTTGAGCCAGCGAAGGGCTGTGAAGGAGAGAGATTGTTACTCCGTATCTGCTGCAAAACTGCTTGCCCTGACACCGGTCTGCTGCTCCACTGGGATCACCTTGACTCTAGAAAGCCAAGGAAAAGATTATATTCTCTGGACAAA ..:::..::..............x..:..:.........:....:...x.:x...................:........:..x.....x..x..:..x..:...:....x..x.............x:........::....x..:.::.:.....::.::...............x.... 182M 144/182 79.1% 182/94230402 0.0% 0/182 0.0% 117098156 73116399 +28023 chr4 + 190214555 151649482 151649481 151650595 1114 GAAGCGTTCTCCGAGTCAGCCTGCATTGTGGAGTATGGGAAAGCCCTGGACATCAGCTACCTGCAGTACCTGTGGGAGGCCCACACCAACATCCTCCGCTGCATGAGGGACTGCCGTGTCTGGTCCGCCCTGTATGATGGCGACTCCCCCGACCCTGAGATGTTTCTCCAGAGTCTGACGGAGGAGGGCAGTGTGAGCTCGGCCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAG-ACAGGACCTC--AGCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCTGGAATGGGATGACAGCTATGACACTGGAATCTCCTCAGGGGCTGACGTGGGCTCCCCAGGGCCTTATGATGATCTGGAGGTTTCAGGCCCCCCAGCACCCATTGATCCCCCCAAACACATCCAGGAGATGAAGAAGAATGCCCTCCTGCTCTTCAAAGGGTCCTACATAGAAGAGTCGGACTTTCAGGATGATGTGATGGTGTACAGGCTGTGTGCTGAGAAGGACTCCGAGGACATGAAGGATTCTCAGGAGGAAGCTGCTAGGCCACCAGCTGAAGCCCAGGCTGAAGTTCAGAGTGTCCCCATCAACAACGGCCCCCTCCTCAGCACCCAGCCAGAGACAGATTCAGAGGAGGAGTGGAATAGGGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAAGCAGCCCCAGAATCCAACTCAGAGTTAGCATCCCCTGCCCCTGAGGCAGAGCACAGCTCTAACCTGACAGCCGCCCA-CCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAAAGAGCTGGATTCCGGCGCCGAGGGCTTGATGGAACAGAATTACCCCACACCTGATCCCTTGCTTCTCACTAAGGAGGAAGAAGGGAAGGAAGAGAGTAAAGGAGAAAAGGAGAAGGAGGGGAAGAAGGAGCTAGAAGATGAGGAGGATGACTTTGACTCTTTTATAGCGGAGATGCCTGCTGTAGAGACTGTGCCTTCCCCATTTGTGGGGAGAGATGAGGCTGCCTTTGCCAGTCGCCATCCCGTGAGGACTCAAAGCACCCCATTCACAGGTG chr4 + 94230402 34549077 34549076 34550105 34549077 34549076 34550105 1029 GAGGCATT-TCTGAATCCGCCTGCATCGTGGAATTTGGAAGAGTTGTGGATATCAGCTACCTGCAGTACCTGGGAGAAGCTCAAGAAGCCATCCTCCAATGTCTGAAAGATTGTAAAGTCTGGTCTGCTTTATATGATGGAGTAAATCCTGATCCTGAGACCTTTATCCAAACGCTTGCTGAGGAGAACAGTACAGATGTGGAACATCCCATGTTTCGTCTCCAGCAAAGGACACCCAGCATGTGTAGCTCCTCTCAAACAGCACCAATGGGTGAGAAGATGCAGTTGGAGCTGGAATGGGATGATAGCTATGATACAGGGATTTCTCCTGGTTCTGATGTGAGCTCGCTCCAGCAATATGATGACCTGGGAAATACAGAGATGCAGATGCCTGCAGTGCCACCGAAACATATTCAAGAGATGAAAAAAAATGCTATCATGCTTGTCAAAGGATCTTACATAGAGGACTCAGACTTTCAGGATGATGTTATGGTTTACAGATTATGTGCCCAGAAGGATATGCAGGATGATGACAACTCCAAGGAGAAAACTTTAACTGTGTCCAGAGAACATCAGGTTCGAAGCCAGACTG------TTGTCAATGGGCCTCTCTCTAACAGCCAGCTGGAAGTGGGC---ATGGATGAGCACAGTAAAAAAAAATCAAGCTTGACTCAAAGTGTAACGAAAGAACAAATAAACCAGAAAATGGTGGAGACTGATCCACAGACAGACTTAGAGTT-GAAGCTTCAG-----GAGGCAGATAATTGCT-TAAGCTCACAAATGCTGAGCACAGATGGTGAGGATTTCATTGCACAGTATGACAAAATTATTAAGGAACTGGATCCAAACAATGCAGGCGTGGAGGAGCAAAAGTTAGACACTCCTGAGCCTGTGTCTCCTGC------------------------------------------------------------------AGAAGAGGAGGAAGACTTTGAGAATTTCTCAGCAGATACCCCTTCTGCGGAGAGCGTGTCATCTCCCTTT---GGATCAAAGGAGGATGCATCTCCCAAGCGC---GCTGCAAGGAGTCAGAGTGCTCCATTCACAGGTG ..:..:..-..:..:..x........:.....:.x...:.:..::x....:.....................x.:..:..:..x:xx:x........:x..:x...::..:..:x:x........:..::.:........x.xxxx:..:..:.......:x...x....:.xx..x:.x......::....::::::x:..xx:::..::....:x.x....x....x::x:x.....x.x.-::..xx....--.:x::..x..x.x:::x..x....xx...x::.................:........:..x..:..:..::.x..xx....:...:....x.:xx:..xx........:....:::x.x...:xx:x.x::::..:::x.xx..x..x.....:..:..:........:..:.....:x..x....:x.......:..:........:..x..:.................x.....x.....::.:.....:x.......:x:xx....::xx:.x:.:..:x.....:..:..x:x.xxx:::.x:xx...xx:....:.x:.:x:....x..------.::x...:..x..:...:::.:..x.....::..::::.::---:x...x...::x.:..:::.x..x...::.::.x:...x....x:x.x..:..:.x..x:x.xx...:::x:x:x..::.x.x:...x.:x.x:...:......-.x.x.::.x.-----........xx.:x...-...x..x...:x:..:x.-.x.:..x:.:.....x:.......x.........x....:.....:..:......:.x::.:x:.x:...x..:x...:..:..x.xxxx...x.....x..:x..::..:::.------------------------------------------------------------------...x........x........xxx...:x:...:..x.:x...x...::....x:...:.x..:..x...---..:xx.:.x....x...x.:.x...:x...---x.:.::....x...:..::.:............. 8M1D234M1I10M2I336M6D41M3D104M1D10M5D16M1D18M1I114M66D70M3D30M3D34M 648/1025 63.2% 1029/94230402 0.0% 93/1025 9.1% 117100405 73114150 +19397 chr4 + 190214555 151656215 151656214 151656902 688 TTGTGTTCTTCCTGCAGGCCCATTCATCAGCGTAGTCCTGTCAAAGCTGGAGAACATGCTGGAGAACTCTTTACATGTTAATTTGCTGCTTATCGGGATCATTACTCAGCTAGCCAGCTACCCCCAGCCACTCCTGCGCTCCTTTCTGCTCAACACCAACATGGTCTTCCAGCCAAGCGTCCGCTCTCTCTATCAGGTATGTTAGCTGAACCCACATCCACACCTGTTGATTTTGTGGGTGCTAATTTGCAGGGCATCTATTTCTCTTTATTTTGTTTTTCAAAAATTC--CTTTGCTCTAATTCAT---TTGCTTTCCTTCCCTGTCCTATTAAGCTCACTGTGTAGTTTATTCTAGACAAACTGTAGAGCTTCA---TTTAGTTTGATGTTTTGACGGTGCCCTACGCAGAACACCCAGGCAGTTAAAAATGAACAAATGTCTAACATCATAATAGTTCCCATAAT---------------GAGGGTGCTACCTGCAAGATATATTGATAACTGGGAGTGGAATTTCATGGTGAGGCATTAACATCAGTAATGCTGTTTTTGACAGGTCCTTGCATCTGTGAAAAACAAGATTGAACAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGTACCTGCTCTTCCGTGTGGACATGTCTGATATGACCCCTGCAGCA---CTAACCAAAGGTAA chr4 + 94230402 34553272 34553271 34553893 34553272 34553271 34553893 622 tttttttttttttGCAGGACCATTTATCAGCGTGGTGTTGTCCAAGCTGGAGAACATGCTGGAGAACTCCTTGCATGTAAATTTGCTGCTTATTGGGATTATTACTCAGCTAGCAAGTTACCCACAGCCTCTTCTTCGCTCCTTTCTGCTCAACACCAACATGGTGTTTCAGCCCAGCGTACGGTCACTTTATCAGGTATTT-------------GCCCACAGGTGTTAGTC------GTGCCTATTGGAACAGTA----------TTTTTGGTGTCTCGTTAAACTTCAGCTCTTTTCAGTTTCACCTATTGCTTTCCCACCC-------------------------------------ATCTG-AGAGCCTCACATCTCATTTCAGTGTTTTCATGATA-TTTGTGCAAAGAGCT--GAAAATTCTGTATGACCATAACTTTTATTGCTAAGTCGT--CTTTAATGCAGCTGGAGAGCCGGAGCGTTCAGACTGT-GGCTGCACTGGGAGCAAGGGAGGGAA----------AAGTA-----ATTGTTAGTGTTG-TTTTGGCAGGTGCTGGCATCTGTGAAAAATAAAATCGAACATTTCGCTTCCACGGAAAAAGACTTCCCAGATCTTCTCCTGGAGGCCCAACAGTACTTACTTTTTCGTGTGGACATGTCTGAT---GCCGCTGAAGAACTGCTAACCAAAGGTAA ..x.x..:..::......x.....:........:..x:....x..........................:..:.....x..............:.....:..............x..:.....x.....x..:..x.............................x..:.....x.....x..x..x..:..........x.-------------::.....xx....::.:------....:x...x.x.x:.:.----------...x.xx...:.:x:x...x...--..:.x:..x:x....:---.........:x...-------------------------------------.x...-.....:...---:.:.x..:::......x.:.:.:-::.::...:.:x:.:--.:x.:..xx:x....x..x.xx.:.x.:xx.xx.:.x..--.:x....---------------...x..x.x:x...:-:.x.::.:..:x.:.x:..::x....----------.:.:.-----..::x..:..:..-.....:.....x..x..............:..:..:.....x..:.....:::...:.:...........:x..:...x.xx.:..:..:......:.:..:..:..................---:..x...x..x.---.............. 202M13D17M6D18M10D23M2I16M3I14M37D5M1D9M3I23M1D15M2D39M2D7M15I15M1D26M10D5M5D13M1D123M3D12M3I14M 435/596 73.0% 622/94230402 0.0% 118/596 19.8% 117102943 73111612 +18389 chr4 + 190214555 151662483 151662482 151663978 1496 TTTTCTTTCTGCTTTCAGATCCCATTCAGGAGGCTTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAGGTGGCTGAGGCACCCCCCAACCTGCCCCTGCCGGTGAGGAACCCCATGCTGGCTGCTGCCCTCTTCCCAGAGTTCCTGAAGGAGCTGGCGGCCTTGGCCCAGGAACACTCCATTCTGTGCTACAAGATCTTGGGTGACTTTGAGGACTCCTGCTGTTAGCTTTTTTT--------TTTTTTTTT-----AATAGAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGCTGCTTACAA---AGATTTCTACTTTAATGTTTCCTGACAATACTTGATTTGTGGGGAGGGGAATTTTCTGTAT-CTTTCCTCTCTCTCTCTA-GCCGGGCCTTTCCACCT-----TATGTTATATATAGAATGTAAG---TCTCATAAGCTG--------GTTGCTCCCTTGGCAGTTTTCTTTGCT---CTGTTTTTCCTCCTTATATTTTTTTGGTTGTCATTCTCCTATCCCTTTGAGTTACTCTTCTTGCAGCTCAGATCACGTCAA----------GCAGATATTGGGG----------TTCAGTGAT-------------GTCTGGTGA---------TGTCTGGAAG-----TGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCACAGGAAGATTGTACAC-----------CTGCAA----CTGTGCG----AATGGTCCTGT--TGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAGATGGAGCTCCT-CCTGCCTCCATCACGAAAGCACATATCATCT-GTCCCTTTGGATTTTACTTCCAGG-------ACGTGTGTCGTCCCC-------------AGCGTGTG---------------------TTGCCTTATGGTGCCGGCAGAGCCTCAGCTATCTGC-------CTGGGAAGTCGGATGTCCTTGG--AGAGAATTTGGAATGCAGAT-------AATTTTTCTTATTTCTTGAGAGCTTACTTTAATCAGCATGACA---CTACCTAAACACTGAAGATGGCCTTATATTAGTAAGATTTGC-------ACAAAATTAAGTATACCTATGCAAACT---ATTACTTTG------GTTTTTAGG---AGTTTGATCAGATGAAGAAGTAATGGTATCACATATATAT--------GTAAGAAGACAACCATCATTATTTTTGTAAGT---------------GTTTTATAAAAACAAACTGATTAACTTGTGAAG------CCATTTCATAGTGGGTTTTTTCAGGGAGGGTATGCTGGGTGGGATGGGGAGATAAACTAAATGCAGCCTGTAAAAACACTGATCATTATTTAAAATTCTATTCCCTTTTGCTAGTAAGCTGCACTTT-----------GTAGAGAAACAGGAACTGTACAGCCCACTTTGGGACCTTGGATGTA-AATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCAA-CGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTT chr4 + 94230402 34557797 34557796 34559420 34557797 34557796 34559420 1624 TTTCCTTCCTGGCCTTAGGTAACGTCCCGCATGGCAGCAGCGTGGGGAAAGGATGGAGCCTCTCAGAAGCCCCCCCGGCCGTGCTCCAGCCTTTCCTGGGACACAAGGGAAAGAGGAGCCTGGCTCACCCCAACCTTCCTGTGCACGTGAGGAATGCTGTGCTCGCAGCTGCCCTTTTCCCAGAGTTCCTGAAGGAGCTGGCAGCCCTTGCGCAGGAACACTCCATTTTATATTACAAAGTACCGGGGGATTTTGAGGATTATTATTAGTGGGGTTTTCTAAATATGATTTTTTTTTTGAAGAAAAAAAACTTTTGGAGTTTAAACTCTTTTTTTTTT---------TTTAGTGCAAAGCTGCTTACAAAAGAAGGTTCTACTTCACTATTTCCTGAAAATACTTGATTTGAGAGGGAAGGAAGGGGCAGAATGCTATTCCACGTTACTTTATATTAGGCCTTACAACTTTCCTCTGTGCTACATAACTTATTTGAGAGATTTCTCACGCTGCTGTTAGAGCAGCTCCCTAAGCTCACCTCCTTGTTACACAGGTGCCCCTCTTTA-----------CTGCCACTGAC---TCCTGTTGAATTTTCACAGTAGGCACTTAAATAAGGTGGACTAAGAGGGGGCAAATGTTTCAGCTTTTTCTACTTCAGAAATACTCCTCTCAAAAGCCTGTTAGAACACAGTTTGTCTGGAAAAGCACTGCCCCAGGGAGAAAGTGTGG-GGTTAAGAAATGCATGCGAAATGTGCACAAAACCCTTTTCTGTGAAGGGCTGTGCTTCTCCATGGCTTTGTCCTCCTCCCTGCTCCCCTTCCTCTTCCCT--------------GGGATGGGGTTCTTGCCAGCACACCTCTGAGAAGCGCTCCTTAGCCAGTAGCTCAGGTTTGTGAATTCAAGTGATCTTATGTGTGTTAAACCCATGACTAGCTGCAAGCAGGTGCTGGGCTCTACACATACCGCATTGCCTTATGTTGCAGACAGATCTGCGGCTATCAGCTGTTGGTCTTTGAAGTCAAATGAACTGTGTAAGTGGATGTGGACTGCAGACTGCCTGGAATTTTCCTTGCAGTTTCTCAGCATTCTTTAATATCTACTGCACTGCTACCTAAACTCTCAAGCATGCCTTAT-TTAATAAGATTTGCACAAAGTACAAAACAAAATGTGTCTATGCAAGTGGTAATTAATTTGTTGTTTGTTTTTATGCTTATTTTAATAAGCT----AAGGAATGGTATTCAGTTTCTTTCAGTAGTATTAAAAGGACAGCAGGC--TGTTTTTGTCAATCTTTTTTCCCCCCACATTTTAATGGAAAATATTGGCATACTCCTGAAAGCTGTTCTGTTTTAT----TGTTCTTTTTGGGGGGGTATG--GGGAAAGTTGA------AAGTTGAATACCGTTTGT-------TTACTTTTCATTTAGG----TGTTGACTTTTCCTAATA--TTGCACTTTTGGGATGGTGAGGGGAGGAGCAGGCTCTTCAC-----------------CAGCTGCAGAATAGGAAGCAGCAACAGGGAG------------AGCTGTCTGCTAGTGACTAACTGCTTGAGAAAATTCTCGTCTGTGAGTAATGGGCTTCATTAGAAGAACCCAAGCATGATGAATTGGCGCATCACTACTGCATTTCATCTTA-TCTTAGTAGCATAATTGTGCTT ...:...:...x::.:..:.xx.:.:.x.x.x.x:xx...x:::..:.:x..xx:..:...:.::..x.xx..:..::xx.....:.....:......:xx....:::xx...:x.:x:xx...x.x.........x..:x...xx........:x.::....x..x........:..........................:...:.x..x...............:.:.::.....::.x::...x..:........:.x:.::.:x.:.xx....:.--------.........-----..x.:.:::.:...xxx.x...:x.:..xx.x.:..---------..x.:.................---.::x........:.x.:........x.............x.:..:::....xxxx.x.x..-..x.:.:x:x.:x..:..-::::......x.x..:.-----.:..:..:...xxxx..x.:..---.:..x:.x....--------.:x.......x:..xxx::..:...:.---.x.x.x::....:...-----------:..:..:.xx.---...:x....:..x::x:xx.x.xx:..:.:..x.x..x:.----------...:..:..xx:.----------.....x:..-------------.:...x.::---------.........:-----.......x.xx::..x.x::.-x...x..x.:::..x.x::.x...:...-----------...::.----......x----x....:::...--.x.::.....x::::xx.....x::..--------------::.....:.:..:.-..x..x:x.x..xx::....:.x:x.:.x.:-..xx..:x..x..x.:xx.:..:.-------.:......::xx...-------------...:x...---------------------..........x...x.:....x.:x.:......x..-------..xx......::...xx..xx.--..x.:..x....x......:-------......:...::xx:..xxx...x.x.......xxx:.:x:..---..........x..x...xxx.......-...:..........-------......:x..:.:.::........::x---....x....------.......x.---.x...:..x..x.----...x........:xx:.x.x.x.--------x...:.:....:.x:x.--.:.......x.:.---------------:.....xx::..x.x.:..::xx...:x....:------.::...:..----x...:...:x...:.......--...x::.x..:------..::.:...:.x.::...-------:.:x.:x.:.....::----.:..xx.....x...:..--:........-----------.x:...:.:....xx..x:..-----------------::.x..:.-...:x:..xx:.:x..xx....------------.:x..:.....:.:....x...x:x::x.:....x..xx::.x:..........x...........:x.....-.:..x..x..x:...:x:.x..:....x..x..x.:.:-..:x..x:...x:...:.:... 280M8I9M5I36M9D22M3I61M1I18M1I17M5I22M3I12M8I27M3I16M11D11M3D40M10I13M10I9M13I9M9I10M5I21M1D28M11I6M4I7M4I11M2I27M14D14M1I31M1I24M7I15M13I8M21I36M7I22M2I20M7I43M3I27M1D14M7I27M3I9M6I9M3I13M4D23M8I17M2D13M15I33M6I9M4D21M2D11M6D18M7D16M4D18M2D9M11I21M17D8M1I22M12D73M1I38M1D22M 904/1396 64.8% 1624/94230402 0.0% 328/1396 23.5% 117104686 73109869 +7047 chr4 + 190214555 151672740 151672739 151672931 192 CTCCCCTGC-CCGAGATAGTCACCACTTGAGGATGGGCCTCCATCACAGAGTGGCAGAGCTGCTCCAGTGCCCCCTGGTCCTGCATCAGTTCAAGCTGCTTTTCTGAAACAATCTGCCCTGGAGTCTTGCCTTCCCTCTTCCACAGTTCCTCAAACACCTATGGACCAGAGAAGGGAGAGGAAAGAGAAATGA chr4 + 94230402 34570379 34570378 34570569 34570379 34570378 34570569 191 CTTCCCAGCACCACCATAATCACCTCCTTTTCTCGTTCATCAATCACCGCCTGGCAGATCTGTTCAAGCTCTTCTTGATCCTGTATCAGTTCAAGCTGCTTTTCTTTAACGATTTCAAGAGGAGTCTTCCCTTCTCCCTTCCACAATTCCTCAAACACCTGAAAACC--ACAACGAGTAGCAAAGATCAGTGA ..:...x..-..:xx...:.....x.:.xxxxx:.xx.x..x.....x.xx.......x...:..x..:x.::.:..:.....:.....................xx...:..:.xxxxx........x.....:.:........:..............:x::...--.x..x.::x..x.....xx.:... 9M1I157M2D24M 133/190 70.0% 191/94230402 0.0% 3/190 1.6% 117102361 73112194 +6231 chr4 + 190214555 151688625 151688624 151688777 153 CTCACCTCTCACTGACAGCGAGGTTCTGTTGCTTTAAATAGCCCAGAAAAGTGTTGAGGACCCAACTAGTCACCTTTTTTGGCTCTGCCCTAGTTTCTTTTATCACATTTTGGAAGAACTCCAGTAGGCCGACTTCGTTCTGTTAAAAAAAAA chr4 + 94230402 34576110 34576109 34576262 34576110 34576109 34576262 153 CTGACCTTTCATTTGCTGTAAGGGAATGTTGTTTTAAGTGACTGAGTAGGTCGCTCAGAATCCAGCCGATCACTTTCTTTGGCTTCATCTGGGTCCGTTTTACCACATCTTCAAAGAATTCCATTAATCCATCTTCATTCTGTTAAAGAAAAA ..x....:...:.x:.x.::...xxx.....:.....:.::.:x..x.::x:.:.x..:.:...:.:::....:..:.......::::.:x:..::x.....:.....:..x:.....:....x..:x..:x....:..........:..... 153M 99/153 64.7% 153/94230402 0.0% 0/153 0.0% 117112515 73102040 +3102 chr4 + 190214555 151697926 151697925 151697965 40 ATTTCATATATATGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529263 72529262 72529302 72529263 72529262 72529302 40 ATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ....:...:.::..................:......... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 79168663 NA +3102 chr4 + 190214555 151697926 151697925 151697965 40 ATTTCATATATATGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525690 72525689 72525729 72525690 72525689 72525729 40 ATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ....:...:.::..................:......... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 79172236 NA +3347 chr4 + 190214555 151697930 151697929 151698149 220 CATATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT----ATATATATATGAAATGAAGGCAACTTG----ACATAAGCTAGAGAAGCAAGGTTAGCTAAATAGGTTGAAGTTTTAGGTGGGGCAAGATAC---CCCATGATTCTCTGGGTTGTCAAAGCATGGTTTATGTATCT------GACCTTTGGAAACAGGGATGCTTTTATCAGGAACACT chr4 + 94230402 46063298 46063297 46063533 46063298 46063297 46063533 236 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCTCAACAGAA-CTAGCAAAGAAATTTAGGATCAAGTCATATGAACTCAAAGTGGGACATGTGACAGAAGTATTGTCCCCCAGGCTTTTAAGACTTGTGTTATGTATGTAAAGGAGATTTCTGGATATAAGTGTTAATTCATCCATAGCATT ....:..:...:::.....:..x.:.:..:.x:..:...:.x......:......----.......:.x.:x:::.x:x:.x....----...x..-....x:...x..xx.x:.x.x..xxx:.xx:.::.:x.:.....:..x.xx..---xx:..x:.:.:.::..:.x.:..::.x..xx........x.------..::.:....x.:.:.x:.xxx..:...x:x.:..:. 55M4I27M4I6M1D53M3I41M6I37M 130/219 59.4% 236/94230402 0.0% 18/219 8.2% 105634632 84579923 +3106 chr4 + 190214555 151697932 151697931 151697993 62 TATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834541 85834540 85834602 85834541 85834540 85834602 62 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .:.:.x...................xx..:..x::...:....:..x...:..:.x...::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 65863391 NA +7930 chr4 + 190214555 151698401 151698400 151698646 246 TGTGCATAATGCTTAAT-TTAATAAGCAATCCAAAGACAGAGAGCACAGAGTTGCAGCTCTGCAAAGCACACCTCCACCACTGCTATTTATTTAATGAATACTCCTGGGCGCTCTTTAAATTGAAAGATGGTTCATTAGATTTGTGCATCTGCCCTTCTCAGCAATCTGTTGT-GTTTCTGATGAAGGCAGGAAAAAAC-ACGAACATATCATTTTCGGGTATGTTATGAGTAACGCCGCTTCCAATGA chr4 + 94230402 34580212 34580211 34580450 34580212 34580211 34580450 239 TGTGCTTAATGTTTTCTCTTAACAAGTTGGCGCAAAGCAGAGATT------TTGCATTTTAG--AGCCATCCCTCTACCACCGCCATTTATTTAATGAGCACTCCTGGGTGCTCT--AACCTGAAAGAATGCTCATTAGATTTGTGCATCTGGCCCTATCAGCAATCTTCTGTAACTTCCCATGTAAGCTTAACACAGCAATGGACGTACCATTTGCAGATGAATTAAGGTTAACTAGTCTCCCAGTGA .....x.....:..xx.-....:...:x:x.xx..::......x:------.....x:.:x.--.:x..:x....:.....:..:.............::.........:.....--..x:.......xx.:....................x..:.x..........x:...-::...:x...x.:..xx:.x.x.:.-.:.:..:..:.....x.:.:.:x:...x.:x....xxxx..:...:... 17M1I27M6D11M2D51M2D56M1I25M1I49M 166/236 70.3% 239/94230402 0.0% 13/236 5.5% 117118189 73096366 +10695 chr4 + 190214555 151701305 151701304 151701520 216 TCTTGGCATCCGATCGATA--CCTACCAGCAAAGTGAAGCTGTGTTCCAGCAGCATCCCATACTGTTGGACAAGCTTCTCTCGGGTCACACTGGGGAGCTCCGGGAGTGTCTCCCGAATCTGGTCAATATTGATCACTTGCTGTGGGTCTGCACCTGCGGGCAGAGATGTGGCGTCGTAGAGCACCAGGGGAGGCAGGTTGGGTTCTGGCATGAACCT chr4 + 94230402 34582714 34582713 34582931 34582714 34582713 34582931 218 TTTTAGCAGTTGATCAATAGACCTACCACCAAGGTGAAGCTGTGTTCAGGAAGAATCCCATACAGTTCAACAAGCTTTGCTCTCTTCACACTGGGAAGGTCAGGAAGTCTCTCATGAATCCAATCGATATTTACCACTTGCTGATGGTTCACATTAGCTGGCAAAGATTTAGCATCGTATAGAATCAATGGGGGAAGATTTGGCTCTGGCATAAACCT .:..:...x::....:...--.......x...:..............x:.x..x.........x...x:........:x...xxx..........:..x..x..:...x....x:.....:::..:.....x.:.........xx...:::..::x..x....:....x.:..:.....x..x.:..:x..:..x..:..x..:........:..... 19M2I197M 159/216 73.6% 218/94230402 0.0% 2/216 0.9% 117118591 73095964 +3926 chr4 + 190214555 151703838 151703837 151703939 102 AAGGAGTAACCACCTGTAGTCCTGTTTTCCTTCTTTGTCTCTCATTGACATGGTGCACCTGCAATAGTTAAATAAGAAAACATTAAACATTGAAAGCAGCAC chr4 + 94230402 34584953 34584952 34585050 34584953 34584952 34585050 98 AAAAAAAAAATACCGATAATCTTGCTTTCCCTCTTTGTCTCTCATTGGTACGGTGCACCTAAAATA---AAACAA-AAGAGATGAGATGTGAGAAGTGGTAC ..::.:x..x:...x:..:..:..:.....:................::.:.........:x....---...:..-..:.x..x.:.::.x::...::.:.. 66M3D6M1D26M 68/98 69.4% 98/94230402 0.0% 4/98 4.1% 117118885 73095670 +6151 chr4 + 190214555 151705166 151705165 151705281 116 CTCAGCAATGCGAACTCACCCCAGCTTGTGATGAAATGAGCGTGTTTCGTTCAGAATTTCACCTCCATTCTCAAGTTCATTGATTTGCCTCTGAATTTCATAGTCTAGGAAAAACA chr4 + 94230402 34585331 34585330 34585446 34585331 34585330 34585446 116 CTCCAAAATAAGAACTCACCCGAGCTTAGAATCAAAGGCTCTTGTTTCATTCACAACTGTTCCTCCATTTTCAAGTTCTTTAATTTGCCTCTGTATTTCATAGTCTGGCAGAAACA ...x:x...:x..........x.....:x:..x...x.xx.x......:....x..:.x:x........:........x..:...........x............:.x.:..... 116M 89/116 76.7% 116/94230402 0.0% 0/116 0.0% 117119835 73094720 +8457 chr4 + 190214555 151707982 151707981 151708124 143 ATTCACCTATGGCTTTGGCCAGGAACCTGATGCTGTTGAGATTCTTCACTTCCGTTCGAACGCCCAAAGGCTCCCCAGGGTGATGCACGGATATATTGGCATCCACTCTCAACTGGCCCTCTGGAAGGAGAGAAGAAAACAAC chr4 + 94230402 34586373 34586372 34586515 34586373 34586372 34586515 143 ATTTACCTACTGCTTTTGTCAGGAATCTTATGCTATTGATATTCTTCACTTCAGTTCTTACTCCATAAGGCTCTCCAGGGTGATGCACAGAAACATTGGCATCCACTCTCAGCTGACCCTCTGTAAAAGGAAACTTAATCAAC ...:.....:x.....x.:......:..x.....:....x............x....xx..x..xx.......:..............:..x.:.................:...:.......x..:::..:.xxx..x.... 143M 113/143 79.0% 143/94230402 0.0% 0/143 0.0% 117121609 73092946 +3150 chr4 + 190214555 151715831 151715830 151715890 60 ATTCTAAACAAACAAACAAACAAACAACAACAACAAAAAAACAGGGTTGCAAAAGGCTGG chr4 + 94230402 6421199 6421198 6421255 6421199 6421198 6421255 57 ATTTTATGAAATAAAACAAACAAACAACAACAACAAAAAAACAGCATTG---AAGGCCAG ...:..x:x..xx...............................x:...---.....::. 49M3D8M 47/57 82.5% 57/94230402 0.0% 3/57 5.3% 145294632 44919923 +3129 chr4 + 190214555 151715832 151715831 151715872 41 TTCTAAACAAACAAACAAACAAACAACAACAACAAAAAAAC chr4 + 94230402 45534864 45534863 45534904 45534864 45534863 45534904 41 TTTTATGGAAACAAACAAACAAACAACAACAACAAAAAAAC ..:..x:x................................. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 106180968 84033587 +3075 chr4 + 190214555 151715840 151715839 151715872 33 AAACAAACAAACAAACAACAACAACAAAAAAAC chr4 + 94230402 81996047 81996046 81996079 81996047 81996046 81996079 33 AAACAAACAAACAAACAACAACAACAAAAAAAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 69719793 NA +8941 chr4 + 190214555 151715865 151715864 151716147 283 AAAAAAACAGGGTTGCAAAAGGCTGGGGAAAAAATGGCTGCAAACAACCTCAA--TATAATAGACAGAAAATAAAACTAAAGTCAGAGAGGTTCTA-GAAGGCAGGAAGGGAGAGG-GAAAGAAGAATACTGCTTCTGTGGCTTCTACCTGCCATGTTCGCCTGGCTGGTCCCCAGGGCTTGAAGGATCAGCTGCAGCTCCCTGACAGCTGTTGCCGCCTCTTCTCCACAGGACATGTCGGGCTCCAGGACCACCTCCAGAAGGCCCACTCCTACCAAAGAGGGGCA chr4 + 94230402 34589588 34589587 34589852 34589588 34589587 34589852 265 AAAACAACAG--CTAGAAAAGGCTATGG--------GTTATAAGCAACTGCAGAGCAAAATAACCAGAAAGTGCA------------GAACTCCTGCAAATGCAGAGAATTACAGGTGACAAAAGAGCACGTCCTTCCCCCTCTGTACCTGCCATGATTGCCTGGCTGCTCCCAAGTGTCTGAAGAATAAGCTGAAGCTCTCTGACTGCTGCAGCTGCTTCTTCCCCACAGCACATATCAGGCTCCATGACAACCTCCATGAGGCCGACTCCTATCAGGGAAAGACA ....x.....--:.:x........:x..--------.:.::..:....:x..:--:.x....:x......:.:x.------------..:x.:..:-:..x....::.:xx.x...-..x.:....::..xx.:.::x:xx::.x...........x.:.........x....x..x.::.....:..x.....x.....:.....x....:x..:..:.....:......x....:..:.......x...x.......x:.....x.......:..::..::.:.. 10M2D16M8D17M2I20M12D9M1I19M1I170M 182/261 69.7% 265/94230402 0.0% 26/261 10.0% 117126277 73088278 +12547 chr4 + 190214555 151716835 151716834 151717085 251 TGAAGTAGGAAGGAG-----AAATAATGAAAACACTCCAAGCCTACCTGCCCTGTTCAAATCAATGAGCGTCTGAGACCTCAGGTTGTCGTGGAGGCTTTTGCCACTGTCTTGCTCCAACTGGATCTGCTTGATCCTCACCGTCTTGGGGATCACCTGACTCTGCTTCTTCCCTGCACAGACGCCATATATCAAGCTCCCATTCACAGCAATTGGGAGCCTCTGCTGGGTAATTTGGTAGCCTGCCTGCACACAAA chr4 + 94230402 34590759 34590758 34591013 34590759 34590758 34591013 255 TGATATAGAGAGGAGGAGAAAAATAA-GAGAACAGTCCAAGCTTACCAGCCCTATTCAAGTCAACGAGAGTCTGGCTCCTTGCATCATCATGGAGACTTTTTCCACTGTCTTGCTCCAACTGAATTTGTTTAATCCTCACAGTTTTGGTCACCATCTGGCTCATTTTGTTATCTATGCAGAGACTGTATGACAGACTCCCATTCACCGCAATAGGAACTCTTTGCTGAGTGATTTGATAGCCAGCCTGTCAACAAA ...x:...::.....-----......-..:....x.......:....x.....:.....:....:...x.....:xx...::x:.::..:.....:.....x....................:..:..:..:........x..:....xx.:..:...:...xx:..x..x:..:::....x:.::...:x..::...........x.....x..:.x:..:.....:..:.....:.....x.....:xx..... 15M5I6M1D229M 185/250 74.0% 255/94230402 0.0% 6/250 2.4% 117126076 73088479 +7331 chr4 + 190214555 151717270 151717269 151717540 271 TCACCCCTTCACCCTCCCCA--------AATCCTCCACCCCTGATAACGATG-----CAATAAACAACACGAATTCATCCCATTGCCCTCATTAAAGTGCTGTATTGGGGAATAACAATAATGTCATTGTCAGGGACCCCTAAGAAAAGAATTTATTGT-----TTCCATCCAGCTCATTAGCCTAAACTCTGCATCTCATTACCAGGCTCCTGGCAGACCCTCCTTATT-TGGAATGCTGGCTAAGCATTTTGCCATCTACTCTCCACACGGCCAACAGCAGTTGCTAG chr4 + 94230402 34592097 34592096 34592380 34592097 34592096 34592380 284 TCATCTCCTAAACCTTCTCATTAAAATGAATTTTTAAAGCCTGA-AATGCTGAGTGACAATAAATAACAAGAAT----CTCAGT-TCCTATCCAAAGCCCTATTTTCACAAGTAACAATAATCCCATTGTCAAAAGACCCTAAGAACAGGATTTATTTTATCAGCTCTATACAGCTCATTAGCCTAAACTCTGCATCTTATTACAGAGTTCCTGACTAGACTGCTTCACTGTGAAAAGCAGGTCGGGTGGTTTGTTGCCAATGCTTTAAACTACAGAAGTCAGTCACTAG ...:.:.:.x.x...:.:..--------...::.:x.xx.....-..:.x..-----.......:....x....----.:..x.-:...xx::....:x..:.x..x:x:.:..........x:........::::x.........x..:.......x.-----:..:..x...........................:.....x::.:.....:.x::x.:x.:.:.:.-..:..x..x..::::.::x....::::.x.:x..::.x..x:.x:.x:x....::.... 20M8I16M1D7M5I17M4D6M1D74M5I66M1I59M 175/265 66.0% 284/94230402 0.0% 25/265 9.4% 117125173 73089382 +18793 chr4 + 190214555 151719100 151719099 151719676 577 CTTTTGTACTAACAGGCAATTAGCACCAAATACCACGGCCAGGCTGAGCCT-----GCAAACACTGGCTTCTACTCCCTGTGCAATTATGAGCGAGCCACCAGAAGCATG-AGGTAAGCAAGAAGTCAGCAATCAGGACAACTGCATCCGATCTAGTAACCATCAGGG-GCACCTGCCTGCATCAGGGCTGGGCCGAACTTCCTGCTGGGATGGACACAGTGCTGGCTGAAAA-CATGAGAGGCACAGCCCCTTTCCCTTGCTCCGACCCCCCACA-GCAGGGCTGGCCCAGCTCTGAGAACTTGCAGTGGGGTGGATCACAAAGTGTACTTACAGGGAGGTCTGCATAGAAGTAGTGCTTCCTGTCAAACAAGGACTTCTTGTTTATGTGGCAGTTCAGAGCCAGGCCTGTCATCACCGCCGCTTCTACACACCTCCTGTTGAGAACCTATGGGAACACAACACACAGTTCCTCTCAGAACCGCAGGCTG-AACAAATGCTTCTCCCACACACTGACATCCTCGC------TGAATATGCAACTTGGC---CCTTCAACAGGCATTATCTCTGGTTCTCTGGGTGGGCAGCTCCA chr4 + 94230402 34593752 34593751 34594331 34593752 34593751 34594331 580 CTTTTATCCTAACAGACAATTAGTACTAAACACCAGGAATGGAAAAAATTTAAGGGGGAAGCA---GCTCCAGCTCCCAATTCAATTATG-TTAAGCCACTGGAATCGTGCAGCTAAGCAAGGAGTCAGCAATCAGAGTGATCATATTCAATC-AGCGAGCACCAGGGTACAGTTGTC---ATCAGGGCACAGCACAGCATCCTGTTGGGGTGAGCAGAACTCTGACTGAAAAGCAGGAAAAGAATCTTTTCATTCATTCTCAGTCACCACCCATACTCCAGACTTGTCCTTTCCTAC--AGCTGTAAAGGGACTGGTTACACTGCATACTTACAGGGAGATCTGCATAGAAATAGTGTTTTCTGTCAAACAAGGATTTCTTGTTTATGGTGCAGTTGAGTGCCAGGCCTGTCATCACGGCTGCTTCTACACATCTCCTGTTGAGAACCTATGGAAACAAGACACAAGGTTTTGCTCGGATACTCAGTATGCAACAAATG--TTTCCCACACACGG----CCTTGTATGAAGTATATATTCAGTGTTGCTTGCCTTTAGACACCATGATACTTCCTTCCCTGAGTGGGTCGTTCTA .....:.x.......:.......:..:...:....x.:x::.:xx:.:::.-----.x..:..---...:.x:.....x:.x........-x::......::...x.:..-..x........:.............::::.::::..:.:...-..::.x..:.....-:..x:..:.---........xx:..xx.:.x.....:....:..::..x.::x...:.......-..x..:.:.x.:xx:::.x...x:.:x.xx:x...x....:.-x.x:.:..x.:..xx::..:x--.x:..:.:x...::x.:.:...xx.::.............:...........:.....:..:..............:............xx......x..x.................x..:...........:....................:....x:.....x:...::x...:..xx.x...xx..-........--.:..........x.----...:.:------.:x....x..::x.x..---....:.:xx:x...x..x::.xx...:...:.....:x.:..:. 51M5I7M3D24M1D19M1I42M1D14M1I9M3D52M1I42M1I21M2D191M1I8M2D14M4D6M6I17M3I44M 390/561 69.5% 580/94230402 0.0% 35/561 6.2% 117125348 73089207 +3827 chr4 + 190214555 151742936 151742935 151743030 95 ATGAAAGAAATAAAGAACTGAATACATGAAAAAGGAACAAGTTATTTTCAAAAGGCTAGAGAAATTTAAAAGAGAAAAACAGAATTTCTGTAATT chr4 + 94230402 43475710 43475709 43475804 43475710 43475709 43475804 95 ATGAATGAGAAAATGTGCTGAATGGTGGAATGGAGAAAGGGTTGTTTCTATAAGGCTAGAGGAATTTAAAAAAAAAAAATGAAATGCCAGTATTT .....x..:.x..x.x:......:xxx...x:::...x::...:...::.x..........:.........:.:.....:::...x:.x...x.. 95M 64/95 67.4% 95/94230402 0.0% 0/95 0.0% 108267226 81947329 +9799 chr4 + 190214555 151758738 151758737 151758969 232 TTCTAATGAAAATAGGATTAAATAAGAATCTTACCGGCAAAGTTCCAGGTAGAGATGCATCAAAAAAAGAAACCAAAGAATTTGGAGGTGCTGAAAAGCGAACTTGAGATCCAGAGAAGAGTTTAGAGTTGGAGGAAATCTGGGCATGAATTTCCAAACCTACCACAGCAGCCCATTTGTGTTCACTAAGAAGAAAGAGATAA--------TGGTTAA--GATGTATTATATTTGTCACCAT chr4 + 94230402 34607635 34607634 34607875 34607635 34607634 34607875 241 TTCTGATGAAAATGAAGCTGAAACATAA-CTTACTGGCAGAGTTCCTGGTAAAGAAGCATCAAAGAACGATACCAAAGAGTTAGGAGGTGCTGCAAACTGGACTTGGGAGCCAGAGAAAAGTTTTGAGTTGGAAGTGATCTGTGCATGGATTTCCAGACCCACAACTGGTACCCATGGAGCAAGACTGAAAAGAAAAAAAGAAATCAAATGTGGTTAACGTATGGATGATGTTAAAAACCAT ....:........:::::.:..xx.x..-.....:....:......x....:...x........:..x..x........:..x..........x...x:.:.....:..x........:.....x........:.x:.....x.....:.......:...:..x..x.xx:.....xx:xxxxx...:.:......:.:.x..--------.......--x...x..x..:..x:xx..... 28M1D174M8I7M2I22M 170/231 73.6% 241/94230402 0.0% 11/231 4.8% 117151103 73063452 +3027 chr4 + 190214555 151769455 151769454 151769531 77 TATATGTGTATATATATATATATATATATATATATATATACATACACATATAATATA--------------GTCATTTGGATATGTGGGGA chr4 + 94230402 44815600 44815599 44815690 44815600 44815599 44815690 91 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACAATATAAATTAACTAAACATGTTACTAGGATACATCAGGA ...:.....::...:....:x..:.:.:.....x.:.x....:.:...:.:......--------------..:.:.x.....::.x:... 57M14I20M 54/77 70.1% 91/94230402 0.0% 14/77 18.2% 106953855 83260700 +14628 chr4 + 190214555 151799081 151799080 151799563 483 CTGGAAAAGAAGCCTGCTGTTTAGAAAGTTGCTTTGTTT--CTAATTGGCATGAGGAGGCTTGAGAGAACCTCTACTTTTTGCTTGTGTTATGATTTTGTGACAGTGGGAAGTCAATCTTAGAGCATTTACAGCTCTCCCGAGCTGTCAGTAACTCAGAGACTTCAACTCCGATCAAAACCTATGACTAAAAAAA-ATTACCATAATCCAGTGACAGGCATGAAGAGAAAGCCATAATAATACTGATAACAATGTGCCAGTTAAGAGGCTATTATATTTAGTGCCTTACTTCAGCACA-GAGAAATCGTCTCAGAGTTGCCATTGATATAACCAGTGCCTTGTTAACAGATGTGACCTGATCTTTGCAGGGCCTGTCTCA--GATACTTACCTGTATATACCTGTGGGAGGAAGAAGAAAAAGGTGTGTCCACCTA---GAATAATTTGTTTGCTGGAAGTTCTGTTGTTGGCAGAAAATGGAAGCTACAAA chr4 + 94230402 34628545 34628544 34629005 34628545 34628544 34629005 461 CTAGAAAAGGAACCTG---TTTGAAAAGTTGCTTTGTTTTACCAGGAGGCAAGTTGGAGCT-GAGAGATGCTACAGTTTATGCCTCTTGTAGAATTTCATGACAGTACGGA-----------AGCAGTTATGTTGCTCCTGAGCTGTCAGTAGCTCAGT--CTTCTGCTTTGATTAGATCC-ATGACTAAAAAAATATGACCATAATCCACTGACAGACTTGAAGA--AAGCCATAATAAGACTGATAACACTGTGTCAGTTAAGAGGCTATTATATTTACTGCCTTACTACAGTAGACTAAAAATCCATTCAAACTTACCACTGGTATAAGTAAAGCCT--TTAAAAAAAAAAAACTGCTGTCTGC---TCTAGTCTTAATAATACTTAT-----TATGCTGACAGGAGAAAGAATTAAAATATGCACCTATTTACATGAGAGTTCTAGATGTTGACAGTTTTACTGCAGGCATATAG-AGTAGCTACAAA ..:......:.:....---...::...............--.:.:xx....x.xx.::...-......xx..x:.x...x...:.x.xx..x:....::.......:x.:.-----------....x...::x:x....:............:.....x--....x:..::...:.:.x..-.............-..x...........x......:.x......--............x..........x....:.......................x.........x...:.x.-x.:.....xx:...:.x..:...:..:.....x:.:x....--....x.:.x:x:.x...x.x.:...---x.:x....:.--:.......:-----...:.:x:::....:.....xx....x:..:::.:.::..---..:x:x.:.:xx..:..:x....:.::..:x....x.x.:-:.x......... 16M3D20M2I20M1D49M11D37M2D20M1D13M1I30M2D70M1I41M2D25M3D10M2I9M5D40M3I40M1D12M 326/452 72.1% 461/94230402 0.0% 40/452 8.8% 117170536 73044019 +3299 chr4 + 190214555 151811883 151811882 151811995 113 TGTTAGGAAAGTTAGAGAAACATCTCCCTACCTCCCTCCCTCCCTCCCTCTCTCCCTCTCTTCCTTCCTTCCTTTTTTCTTTCTTTTTTTTTTTTTTGCAAAAGCACAGGTGT chr4 + 94230402 20861450 20861449 20861557 20861450 20861449 20861557 108 TATTACAGAAATTAAACTTTCATCCTCTTGTCATCTTTTTCCCTTCTCTCCCT-----TTTTCCCTCCTTCCTGTCTTCTAATTTTTATCTGCTTTCACAAAAACACATCTGT .:...x::..:...:.xxxx....::.:.::.x:.:.::::..:..:...:..-----.:....:........x.:....xx:....x.:.x:...::.....:....xx... 53M5D55M 67/108 62.0% 108/94230402 0.0% 5/108 4.6% 130950433 59264122 +10386 chr4 + 190214555 151824151 151824150 151825690 1540 CTCTTCATAGGAGATTCTGAGGATGTACAAATGCTGATACCCACATGTAAACTGTCCTGTGGAATCCAGCTGCCTTTGTTGCAGCACAGACTCAACAATGCCAGGATTTTTTTTTTTTTTCTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCACG----------CCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGAGCCCGCCGCTACGCCTGGCTAATTTTTTGTATTTTTTAGTACAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATTTCCTGACCTTGTGATCCAATGCCAGGAAATTTCTGAGGCTACACTTTTATTCCAGATCCAGGGTTATCCTTTTCTACCACAATCCACACAGGTATTTCTAGTCGGTCTCAGAATTGTGGATAACATCAGAAATGGAATGCAGCTTGTAGCAAGCCAGAGAGCTAACTTCTAAAATTAAATTAAGATTAGACATGGAACCTCATATCTTTGAAGCCGTGCTGCATAATAAGGTGGAACTGAATGCTGTGCCCAGGAAATTTATGCCTATTTGCAGCAACACTTCCGAAAAAAATTGAATTGATGAGCAGAGAGTTAATCATGTTGTAACAGCATATACAGTAATCTCATGAACCACTCTCCACTGGAGTTAATAATTAACTGC-------TACTGAGCTACCTAATAATGTGGCCTGGCTTGGCTTTCCATCAGCAAAGACCCGGCAACCAGGGACAATGGCTTCTGAGGACAGCCAGTCAAAAATTGCATTTGCCTATAGAAAACCTATGCTTTTACTTCGTCCTGATTTGGAACAGAGCTGGTTTCCTAGCTAAAGCTGTGGTGATAATGACTAGAAATGAATTTCTCATCTAGGCACATTCTGAAAGGCCCGTTCTGGGCATCCGTAA-AGAAGAAAAC-----TCGTAAGGTAACCTAAAAGGGACAAAATGATAGCTGCTGTAATT----------CATCTGTCTTTGAACAGCAGTCTGCCAGCCTGCCCAATTAGGTATTATTGGTCCTTTCAC----------------ACATATTGTAGTGAAAAAAGAACTTGCT----TTATCTTTAGAGAAACTTAGTTTTACTACTGATTCA--AACAAATTAAAAATACAGATTTGGTCTCCTTTCAGTTTTTTGAAATGTCCAATACTGAGT----------------ATTTGGTAACCAGTATGCATGTGATTC-----------CTGTAGTGATCATGAG---------CTCTGATATTGCTATGTATACAAAATG-CTTTAGAAATCAGCTCACAATGCAGTTTCCTACTGTGGTTTGAGTGAATGATTCATGACTACAAGTTTAAATGGTAGGTAGATATGGAGAAAAGTCATCTGAGTTTTTAAATGATGACCCCTTTCCAGGTAAAGTGTCAAAAATAATTATTCCTCTTAATTTTTTCTGGACTCCAGTGAAAATGTACCATGCCATTTTTCTCCCACCTTAAGGGAACAATTATCCATTGCTCAAAGACTAATGCAAGAGTCTGTAATCTTAATTGAACAAAACATATTT chr4 + 94230402 34648464 34648463 34649804 34648464 34648463 34649804 1341 CTGCTAATAGTAGATTCTGTGGGTGTACAACTGCTGACAGCCACATATAAACACTGCTGCAGAATTCTGCTATCCCTGCTACA----------------------------------------------AGTTTTG----------------GGCCTGTTGTGCTGTAATTTCAG---------AGCTTCTGTTTTTGTATATCCAATTATAGATCTTATTTTGGTG-TTGAACTTTC--AGCAGGTGG--CTATAGTAGGC-----ACAGATCTAGCTGATTTT-------------TATATATGGAG-----CCGTAAAAGCAAGCAGCA--------------------GAGGCAAAGCTTGG----TTGTAAG---------------CTGATTGTGTATTATTCCCTTTT------------------------------TCTTACTAAGGAGAATAA-----------GCATACA----------------------AATTCTTA---------------TAGACTTGGACTC------CTCTGAGCAGAGATTTTAAAATAATATGGAAAGTATTAGTGTTC--------------CATACTTAGACTACCATTGCAGATATACA-AGAAATGATAAACA-AGAGTTAACTGCATTGTAA----ATGTACA-TAATCTCATGAACTGTTCTCCACTGAAGTC-ATAATTAACTGTCTGCATGCACAGAGCTATCCAGTGATGTTTCCTAGCAGCACTT---ATCATCAAGGATTTGGCACTAGGTTAAAATGGTTTACACAG--AGCCAGTTAGAAATTGTAATTTTCATCAAACAGTACAGTAGTTTTGTCTGTTCTGATTAAGAACCACACTTATTTTCTAGCTTAAGGTGTAGTGACAA-GTGTCAAAGCAAATTTTTCATTGAAGGAGATATTGAATCATCAGTACTACTTGTTAGAAACAGGAGAAAATCATAGTCCTAATGCAGC--AAAAAGAA------GATGGGTGTTGTTGTTGTGTCTGTAACATGGGATTCTGGAGAGTAAATTTGAAAGCTGTTTAATTAGAATGGTTTGATCTCTTTTCTGCTTTACCTCTGGGGAAAAAGGGGGGGAAAAAAAAAAGTATCTCCAGTTTTTTGTATTGCATCTTCCTTTAGCTAAGTAGTCAACAGAAGATAAATAATTCATATTAAACTTTCT-------------AATGTCACATGCTAATTTAGACATGGAACAATGAAATGGAAACCATTATGTAAGTAGTTCAAAGGTAATCTCTCTAGTGATTGTGTGAAATTTAGACTTGAACATGAGTATGCTCGTGAAATGCCTTCAGATTTCAGCCCACATTACAATCTGCTGTTTTGTTTTGAATGAATGTGTCGTGACTTGAAGTTTAAGTGGTAACTACA----GATAAGATTGAACAAAGTACTTTAATGAT-ATCCTTTTTCAAGTTAGCTACTGGAAATA---CTTCCATTTAA--TTTGCTGAAGTCCATTGAGAATATA--ATTTTATTTTGCT-TTACATAAAATTAACAAACTTGTGATGTTCAAAAGCTAGTGCCAA-------AATCTTAATTGAAACAGACATTTTT ..x:.x....x........x..:.......x......:.x......:.....xx.x...::....:.x...::.::..:.:..----------------------------------------------...:.:.----------------..xx..:x...x..::..:..:.---------....:.xx:.:...x:.x:x.:----------::...:.xx..-:.x.:.:.:.--..:..x...--...:..x..x.-----x:.x::..:...:.....-------------..:.x....:.-----....:xx...x..x.xx:--------------------..xx...x..:x..----..x.:..---------------.x...:xx.x:....:.::..:.------------------------------...:.xx.xx.x.:....-----------.x..:..----------------------..:.::..---------------.....x....x:.------..:...:xxx:x::.x:.x.....x:.....xxx.x.:x...x.--------------.x..:..:x.x:.x..:.x.x..x.x.x.-x...x....:.:..-........:::::......----..:....-.............:::.........:...:-...........:-------:..x......:.:.:.:....xx...:..xxx:...---....x...:..:::....x:x:.xx.x.....:..x::x:.--.......:.:......:.x..x:.xx:.:.x.::x:.xxxx...xx.::..:......x:....x:x:..x:...:......x...x...:....:..-.xx.x:..:::.....:....:x.:.x.x..x:....xx::.x..x..:xx::.:x.x..-..:......:-----..x...x.:.:.--....:.:.------...:.x..:...x:..----------...xx.x:.:..:.x..:.:x:.xxx.:x...:::......:xxxxx...:..::..:x.----------------.x.x.xx.x:.x:......:..x.xx..----..x.:.x..xx.x.x...xx...x:...xxx.x...--.:x.:..x..x...x..x...x::::.:..-------------......xx..:..:.x.----------------.xx...x.....x....:.x..::...-----------..x.......::..x.---------..:x:.:..x:x....:x::::.....-...:...xx.....:....x.:..:.:.x..::.x..x.....:......xx..:.....xx........:.....:x..x.----..x..:.x.x.x.x:...x:..x......-.:..:...:..:..x.:x.:::::.....---x....x:....--...x...:.x....x...:...:..--..x::.....x..-::..x.x..:xx.....x:x.x::x..:.....::...:...x.:-------.............xx.:....x... 83M46D7M16D23M9D22M10I11M1D10M2D9M2D11M5D18M13D11M5D18M20D14M4D7M15D23M30D18M11D7M22D8M15D13M6D44M14D29M1D14M1D19M4D7M1D30M1D12M7I36M3D41M2D98M1D60M1I10M5I12M2D8M6D16M10I60M16I28M4I36M2I30M13D17M16I27M11I16M9I27M1I82M4D29M1D29M3D11M2D25M2D13M1D45M7D25M 797/1249 63.8% 1341/94230402 0.0% 383/1249 30.7% 117175687 73038868 +3452 chr4 + 190214555 151836288 151836287 151836388 101 TCCAAACAAAGGGACAAGTAGAAATA-CACTACTTTTTTTGTACTACCTTTTGTTTGTTTGCTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 25575963 25575962 25576059 25575963 25575962 25576059 97 TCCAAATAGAG-----AATAGTGATTTCAAAATCCTTCCTGGGCCACTTTCTGGTTTTTGGTTTGTTTGTTTGTTGGTTGGTTTTGTTTTGTTTTTCTTTTT ......:.:..-----.:...x:..x-..xx.:::..::..x:.:..:..:..x..x..x.:......x..x:............x....x.....:..... 11M5D10M1I75M 68/96 70.8% 97/94230402 0.0% 6/96 6.2% 126260325 63954230 +3325 chr4 + 190214555 151836317 151836316 151836388 72 TACTTTTTTTGTACTACCTTTTGTTTGTT-----TGCTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79896001 79896000 79896077 79896001 79896000 79896077 77 TGCTTTTGTTCTTCTGCTCTTTAACCTTTCCTAGTGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTT .:.....x..x.x..:.::...:x::x..-----..:.....x....:..........xx................. 29M5I43M 55/72 76.4% 77/94230402 0.0% 5/72 6.9% 71940316 NA +3391 chr4 + 190214555 151836318 151836317 151836385 68 ACTTTTTTTGTACTACCT-------TTTGTTTGTTTGCTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTT chr4 + 94230402 69155132 69155131 69155206 69155132 69155131 69155206 75 ACATTTATTATACTGTTTGATTGTTTTTGTTTGTTTGCTTTTGTGTTGGATGGGTGTTTTTTTTTTTTTTTTTTT ..x...x..:....:::.-------...............x.x.x...:x...x..x.................. 18M7I50M 55/68 80.9% 75/94230402 0.0% 7/68 10.3% 82681186 NA +3246 chr4 + 190214555 151836335 151836334 151836386 52 TTTTGTTTGTTTG-----CTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 55070505 55070504 55070561 55070505 55070504 55070561 57 TTTTAATTGTTTGAGGGGTTTGTTTTTTGTTTGGTTAGTTGTTTTTTTTTTTTTTTT ....:x.......-----:..........x......:...x................ 13M5I39M 46/52 88.5% 57/94230402 0.0% 5/52 9.6% 96765830 93448725 +3094 chr4 + 190214555 151836342 151836341 151836386 45 TGTTTGCTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79896035 79896034 79896079 79896035 79896034 79896079 45 TGTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTT ......:.xx..xx...:........................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 71940307 NA +4641 chr4 + 190214555 151850193 151850192 151850296 104 TCCTGGCTTTGCCACTTACTAGCTCTGTGAT-TTAGGCAAGTTACTTAAGTAACATTTTTTGTGCCTCAGTCTCCTCATCTGTAAAATGGGGATAATAATAGTCA chr4 + 94230402 13242449 13242448 13242548 13242449 13242448 13242548 100 TCCCAGCTCTGCCACTGACTCAC-CTGTGACCTTGGGCAAGTCAC----GTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTA ...::...:.......x...x:.-......:-..:.......:..----...:.x.:.:.x:.........:...:............:......x..x..x.:. 23M1D7M1I13M4D56M 77/99 77.8% 100/94230402 0.0% 6/99 6.1% 138607744 51606811 +3388 chr4 + 190214555 151855531 151855530 151855613 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:.........:x.:........x.xx.x...x::.........:.:..x.xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 75822334 NA +3276 chr4 + 190214555 151877727 151877726 151877802 76 AAACTGATCCTACCTTTGTGTGTGTATATATATATATATTTAATTTTTTTTTTTTTTTTTTTTTTAGACAGAGTTT chr4 + 94230402 23522760 23522759 23522835 23522760 23522759 23522835 76 AAATTGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTTCAACCCACTTT ...:...xxx...x.x.......:................:xx...::.x.....:.x....:..x:..xx.x... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 128354967 61859588 +6869 chr4 + 190214555 151887329 151887328 151887586 258 CCTGTTGCAATGGGGTTCTGTGGCTTGAAAAAGACCTCTGTATTGTATATGAATCTTA-----GTAATTGGAACTTGGACTCATCACGTCTTTTTTAGCAATGACATTGTAACAGCATGCACCCATCCATCATCGTGTCATCCTTATGAAAATG-GTCTCCACTGGTCAGCTTGTCATAGTTAATTAGTCTTCCAATGTATGGATAGTCA-GAAGCAAAGCGACTTTGAGGTTTTTTTTGACAATTTTAAAAGTGAACTCCAGAG chr4 + 94230402 34665761 34665760 34666017 34665761 34665760 34666017 257 CCTAGTCTAACAGGGTTCATTAGTTTGAAAATGATCATTGTATTCCA----AAACTTACGTAATTAATTGAAACTTAAACCTGTCACTTCTCTTTTAG-GGTGACAT---ATTTGTGTTAAAACATCTGTCATCTTGTTGTGTGTGTGAGTGTTTATTCTTAATGGTCAGCTTGTCACAGTTAATTAGTTTTTAGACATAGGAACAGTCATAAAGCAATGTGACTTTGAAAACTGTTTCTAAACACATAACTTTGACCTCCAGAG ...:x.x:..::......xx.:.:.......x..:.x:......x:.----..x....-----x......:.....::..:::....x...:......-::......---.x:x.::.xx.xx....::.....x...::.x:x.:...:x:.x-:.::::.x..............:...........:..:x:.::..x.:.:.....-:......x.:........::x:.x...:x.x.xx:x...xxx...x........ 47M4D7M5I35M1D8M3D44M1I55M1I54M 165/250 66.0% 257/94230402 0.0% 15/250 6.0% 117221568 72992987 +3347 chr4 + 190214555 151888843 151888842 151888941 99 GACTTTGGGCAAATCACTTTACCTCTCTAAGGCTCAATCTCCATATCTGTAAGATAAGGATAATAA----TATATGCCTCA---GAGTACTGTAGGGGTGACTAAA chr4 + 94230402 83501141 83501140 83501246 83501141 83501140 83501246 106 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAA ....:.........:....x....x.x.:x.x....:.:.:.x:.:......:..:::.x.:...:----..:x.:.....---.:...:...::..x.:.x.x.. 66M4I11M3I22M 67/99 67.7% 106/94230402 0.0% 7/99 7.1% 68387702 NA +3139 chr4 + 190214555 151893700 151893699 151893758 59 CTTAGCTCTCTTCTCTTTCTTTCCCTTCTTTTTCTTCTCTTTCCTTTCCTTTCCATTCT chr4 + 94230402 79173833 79173832 79173890 79173833 79173832 79173890 58 CTCAGCT-TCATTGCTTCCCCCCCCTTTTTTTTTTTCTTTTTTCTTTCCTATCCATTCT ..:....-..x.:x...:.:::.....:.....:....:...:.......x........ 7M1D51M 45/58 77.6% 58/94230402 0.0% 1/58 1.7% 72719867 NA +3496 chr4 + 190214555 151903117 151903116 151903289 173 TGATTTTCTATAAACCATCTTTATGT---TCACTATTTCTTTATTCTGCTT---GATCTAGTCATTGTTAAAGCCTTCTACTGAATTTTTGAATTCAGTTATTCTTCAGCTTGATGATTTCGGTTTGTTTGCTGCTTCTTCTTCCTTTTTTTTTTTTTTTATTAAACTTTATTCTATCT chr4 + 94230402 32437160 32437159 32437324 32437160 32437159 32437324 165 TAACTTCCAAAAAGTCCTCTTT-TGTAGGTCATGCTCTCATTATCTTGCTCTGGGATCTTGTC-TGATTAAA---TTATA---------GGAAATTACTAATACTTCACTTTGAACAGCCAGCTCCTCCTGGCTCTTCTTCTTCTTCTTTTTTTTTTTTTGTTAAACTTAATTCTTCCT .:.:..:.x.x..::.x.....-...---...:xx.:..x....::....:---.....x...-.x:.....---..x..---------x...x.:.x.x..x.....x:....xx.x::x.x.::x::..x:x..........:.:.............:........x.....x:.. 22M1D3M3I22M3I9M1D8M3D5M9D90M 110/159 69.2% 165/94230402 0.0% 20/159 12.6% 119465957 70748598 +3449 chr4 + 190214555 151906837 151906836 151906926 90 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGACGGAGGTTGCAGTGAGTCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x....:.:...........::........x.xx:x...x::...........:..x:xx:..:..:..------..x..x...... 72M6D12M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% 75873631 NA +3258 chr4 + 190214555 151923222 151923221 151923295 74 GTGCACCTGTAGTCCCAGCTACCTGGGAGGCTGAGGTGGAAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:........:..::........x:xx:x...x::........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 75890018 NA +3064 chr4 + 190214555 151961956 151961955 151962005 50 CTCTACTTTCTTTCCATTTGCACTTCTTTCTTTTCTCTCCTTCTCTTTTC chr4 + 94230402 25163667 25163666 25163716 25163667 25163666 25163716 50 CTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCC ...:x:......:..:.::.:x.....................:..:.:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 126798289 63416266 +3027 chr4 + 190214555 151968137 151968136 151968218 82 ATGGTGGCACGTGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCTGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....::.::.--....:.:........:..::........x.xx.x...x::..x.....::.:..x.xx:.....:.. 13M2D67M 53/80 66.2% 80/94230402 0.0% 2/80 2.5% 75934939 NA +3099 chr4 + 190214555 151968272 151968271 151968344 73 TCAAAAAAAAAAAAAAAAAAAAAAAAAAACAAGAAAAGAAAAAAGAAAAAAAAGGAATAGAACCAGGTCTGAG chr4 + 94230402 72824138 72824137 72824210 72824138 72824137 72824210 73 TCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAAATAATCATATTCAAG ......:..:.......:.....:....:........x.x.:x::.x.xx....:..x.x..:..x:.:::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 79144134 NA +18785 chr4 + 190214555 151989729 151989728 151990152 424 AGACATAAAATCCCAAGCCCTGGAAGACTCAGCTTCTCCCTTT------CAATGGAGTTTTTTCAGTCAAGACACTTTAGAGATTACCAAGGGTCATTTTAATCAAAATGAAAGACATCTCTTATTAAGATGGCTTTGCTGACAAATAATTAAGATGTATTACTAGCATATACTTATCCCAGATGGCTCATTGGTGTCCATTTGAAGTAAGCATATGA-AGCCCATAGTCCACGCCTCAGCTCTTTAAAAACAATTTATAACCTAACTCA-CCATCCTAACTACCTGAGAAGATTTTAATCCTAAACCTGTCACCACCCATTATTTTCACAGGGTCCTGACAGTTCTACATTAAAACAGTTTATAAGTAAAAGTTAACAAGGCCTAAAGAGAGTGATTTATGTTTTACTGAGTGAAACAGTCAACTTTCTTT chr4 + 94230402 34694945 34694944 34695362 34694945 34694944 34695362 418 AGAGATAAAATTAGAAGTGCCAGACAGTTCAATTTTTACCTCTGCTTGTCAACG-------TTCTATGAGGACC------ACATTTCAGAGGGTCATTTTAATCAAAATGAAAGACAGATCCTATTAGGGCAGCTTTGCTGACAAATAATTAAGATGAATTACCAGCATACACTTGTCCCAGATGCCTTGTTGATGTCAGTTGGTAGGAGGCATGGGAGGGCTTATAGTCTATGCTTT-GCTCTTTAAAAGCAATTTACAACTTAAGTTAGCCATTCTAACTACTTGAAAAGAGCTTCATCCTGAAACTGTCACTAGAAATTATTTTCATAGATTCCTGATGCTTCTACATTAAAACAGTTTATATGTAAAAATTATTAGGATCTAGAAGTGTAGATTAGTGTTTCATTATGTGAAATAATTGACTATTTTT ...x.......:xx...:x.::..x:::...::..:.x...:.------...:.-------...x:.x.:...x------.x...x.x:............................xx..:.....:.:::.........................x.....:......:....:.........x..::...:....x:..x.x..x.:....:x..-:..::......:.:..:.:-...........:.......:...:...x.:.-....:........:...:....x:..x.....:..x.......:.xxx..........:..:x......::x......................x......:...x:.:.::...:.::x:xx....x:.....:.:.:x......:.:.::...x.:... 43M6I5M7D13M6D138M1I19M1D31M1I161M 304/410 74.1% 418/94230402 0.0% 22/410 5.4% 117294784 72919771 +51954 chr4 + 190214555 151991424 151991423 151992879 1456 AAGCAACAACCTCTCTTTGCCACAACTGCATTCCATTTTTGGCACCCAACTTTCT-AAATGTGAACAGAAACTAATTTAGGGTGCTCAGTCTGAAGCTGGTATGGAAG------GTATTTCTCCATCCGTTATTTCAAGTTATAATAAGCCAGTGTGATTGGAGTTGCTCCCAAGAGAAGCAGGCCATAATATTTTCACTGTCACCATGATCACAGACTAAGATAAGAGGCCAACATGCTATTTTTACTCCCTATTTTTTACTCGTGGTGTTAAATACAAGGAGAA-CAAGTGAAAAACAAACTACCTTGGCCCCCGCCGCAGAGTACAAAACATCCAACCTTTTCTTTTTCCAAGCCGGCCACGATGTACGTCAAGGATGACACAGATACTATTGAGGTGATCTGGTGCTGAAGAGATGCCTCTTAATTGTGTTTGCAGCGCAGAGCAGAAAGCATGCCCATTCGAGGTACTTGTTGTATCATTTTTAAATCAAGGCCATCTTTTTCTCAGTGGTAAACGTGAAATGTTTTTAAAGGCCAGACTTAGCATAAAAATCTATTGGTTGCCATGGATACCACTTACCACACAGGACTGCACTCTTGTGTTCAACTGTGTGATTTTCTCTATTCAAAGGTTCAGCATTGTCAAAAAACAAATTACTTTTTCTGTTGTTTATCTCAAAGTTCATTATGGGAAAGGCAATAAATAAGAAGA-----TATTCATGTATGGAGGGGAGTGACGTGGGGAGTCACTTGGGCGCCATGCCTTAAAATTTGGTATTTTACTATAATTATAGCCAAATTGGCTATTGTTAGGAAATAAAATGCATTTTGATCTTTTTTGTGTATGTGAATGTAAAGTAAAGCAGGTACTTGGAAATCTGTTCCCAACAAAATTACATGGTAATAAGGCTTTTCACACCTACACAGCACTTAGTTACAAAGCTCTGAAAG----AAGGAGATTAAGCCCTGATGGGTTTGAAACTTGGTACCTGAGGCTTGTG----GCTTTCCACTTTATCAGAGAAACTGTGGGTTCGGGACCTCATGCTTGCTGAATTATTCATGCCATCTTTC-CATCATACATCTTTTAGGGGTGGAACCCATTAGGCTGCTATTATTAAGCATGCGGGTCCACCCTGTCCTGACA-CAGCCCAG----AAGCCTGCACCACTGCC------------CTTGGCTAATTAGCTTGAATATTTGC-------AGCTGGCCACGCCTTCCCCTCCCCACTTCTTCCC----------TTCCACCTCTGCTCCTGAAGGAA----AAGTGGGGG-----GAAAAAACCCACAGGG---------------AATTTACATAAGTAGCAAAAGGGAGTTTCTCACATTACTGGAGGGTATT-CAAAGGTAATTTGTTATCAGCAAGTTCCCATTGGCT---------AAAGCCTGGTGTATTTTGCTATAACTCCCAATTAATCAAGGAATGCCCG-GAACATTGACTTGTTACTTACTTAAGATGCTTTTCCATCACCTCTCCAGCAC chr4 + 94230402 34697799 34697798 34699295 34697799 34697798 34699295 1497 AAGCTGGAATCTTTATTTATTAAAAATACATTCCCTTTTATGGACTCCACTTACTTGAATGTGGAGTGCAAGTAAATTAGG---------CTGTAGCAGGCATTGCAGCAATAGTTACTACTTCTTCCATTATTGCGAGTTATTATAAGCTTGTATGATTGAAAGTGCTAT--AGATAAGCATGCAATAATATTTTCACTGTCACCATGATCACTGACTGAGATAAGAGCTTGACGTTCTATTTTCATGCAGGATA-------------GAGAAAAACAAGGAGGGGAAAATGGGGGGGAAAGGGCTTCATGTTGTGCAATGATATGCAAGAAAAAAAA---TTCCATGCTGAAAGCAGGCCCACACATACGTCAATGATGACACA--CGGTGCTGAGAGGATTTAGTGTTAAAGGGACGCCTGTTAATTTTATTCGCAGCAGAGAAGAGAAAGCATGCCCGCTCAAGATACTTGTTGTATCATTTTTAAATCAAGGCCATCTTTTTCTCGGTGGTAAACGTGAAATGTTTTTAAAGGCCAGACTTAGCAT-AAAATCCATTGGTTGCCATGGAGACCACTTACCACACAGGCCTGCACTC-GGTGCTCGACTCTGTGATTTTCTCTATTCAAAGGTTCGGCATTGTCAAAAAGCAAATTAGTTTTCCAGTTGTTTATCACGAAGTTCATTATGAGAAAGGTAATAAATAATAAGGTATTTTATTCATGTGTGGATAGGTGCCATATGTGAATTAACCAGGGTGCTATTCCTT-AAATTTGCTATTTTAAAATCATTAGAGCAAAATTGGCTATTGTTAGGAAATAAAACAGATTTTGATC-GTTCTGTGTGTATGAATATGAAGCAAAGCAGGTAGTTGCAAGTCTGATCCCAACAAAATTACCTGGCAATAAGGCTTTTCACACCTACACAGCACTTAGTAACAAAGCTGTGAAGGAGAAAAGAAGATTAAGCCCTGATAGGGAAG-AACTTTCTACCTGAGGTGCATGCATTGCTTCTCCCATTGTCAGAGGAAAGGTGGGTTCAGGACCCAGTGCTCCCTGAGTTATTCATGCTGTCTTTTGCATCTCGCATC-TTTAGGGCTGAGCACTGGTAGGA-GTTGTTCTTAGCAGTACCG--CAAACCTAATGGAACAGTAGCTCAGTTCAGCGCCTGTTCAGCTGCTTCTCCTGAAGTGTTTTCCTAATTACAGCAAATCCTTGTGCTGCAGGGCCTAGCACACTCGCCCCACAGCAAATGCACCCAAGGAGGTGGTGTGAGCCCTTCTCTGTGATGAATCTGAAGCTGAGGCTAGTCAACACCTCCCCAGAGCTTGATGATAGTGACAATTTATA-AAGTATC-AAGGGAAACCTTTCACATTACCAAAGGGTGTTACAAAGACAAATTGGTGTCAGCAAGTTCTTCCTCACTTTTTTTTCCATAAC-------ATTTTAGTCTAATTTCCAATTACTTGAGGAATATGAGAGTACATT---TCCTTCAGCACTTAAGATTTGCTCCTGTCACCTCCTTGGTAC ....x:x..:..:.x...:::.x..x.:......x....xx.x..:.x....x..-:......:.xx.x..x...x.....---------...x...x..:..x.x..------x..:.x..:.x...:.....x.:......x......:x..:......:.:x....x:--...x.....x..x............................x....:.........x:::..:.x.......:.:x.xxx..x-------------.xx...x........::-x..:..:::::x...xx:.:.::xx::x:..x::::x:.:...:.x.xxx..---..:.x.x:.xx....x....xxx.::........x.........--::x.::....:x...:.:...:.:...:..:....x......x.:..:.....:x...:x.............::..:..:.........................................:........................................-......:...............x.................x........-x...:..:...x.........................:.............:.......x....:.x..........x.:............:......:.........x...:-----.........:....x:..x.:x.::..x.:.x.x..:x...:..:..x....-.......x.......xx..x....x...x..........................::x.........-x..:.....:.:.....:.:...:..........x...x..:....x...............x...:.................................x........x....:.----...:...............:..xxx.-.....xx.........:x::..----....::.x.x..:......:..xx........:.....:x:....:x....:..........::.....:-....x::....-.......x..::xx.::x....x-.:.:..x...:xx:.:.x.--.x.x...:x:xx:...-:...:...----:x.....:x.x:....:------------:..xx.......xxx::...x:...:-------:..:x:x...:.::x....x.xx..xx.x:x...----------.x:x.x.:..x...:xx:.x...----...:x.:..-----x..x.xx:..x...:.---------------......:.-.....x.-..:..:.:::.:.........:::.....:..-.....::..x...x.:...........::x:.x:..---------.x.:.-------.....:x.x...:.:.......x.::......::xx.-.x.....---.:x..xxx:.........x:x:.:.::.......::::.:.. 55M1I25M9D18M6I57M2D83M13D17M1I52M3D44M2D163M1D49M1D114M5I52M1D67M1D116M4I26M1D22M4I70M1I11M1D23M1D19M2D16M1I8M4I17M12I26M7I34M10I23M4I9M5I16M15I8M1D7M1D32M1I36M9I5M7D37M1I7M3D42M 1031/1406 73.3% 1497/94230402 0.0% 141/1406 10.0% 117293625 72920930 +3161 chr4 + 190214555 152001009 152001008 152001059 51 AATTATATATATA---TATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792611 24792610 24792664 24792611 24792610 24792664 54 AATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .....:x...:..---..................x:........x......... 13M3I38M 45/51 88.2% 54/94230402 0.0% 3/51 5.9% 127208398 63006157 +4303 chr4 + 190214555 152010322 152010321 152010526 205 TGATATTTCTGCAATTGTGCCATAGCCAGCTAATGTGTAATGCTGTAGTTTAATAGTC------------TATTAAAACACAGCACTGCACATTAAAATCTCTACTGTATCACTGCAGATCTACTTAACAAAGGCGAGGTCCCCAGAAAGCACTATTCA-CTTGCTGAGAGTTGCTGCAACAGAACAGGAGAAGTCT------------CTTATGGCGGAAGAATTTAAA chr4 + 94230402 29150509 29150508 29150729 29150509 29150508 29150729 221 TGCTTTCTTTGCAACAGTGAC-------GTTACTGTACAATATTATATCTTAATAGCCATCTCAACTGGCTATTAAAATGCTGCACTGTGCATTAAAATCACTACCCCACTGATACACAAATCCTTACCAAAGATACAGTCCCTGAAAATTACCTTTCATCTCAATGGAA--TGCTGCTATGCCAAATGAGCTGTCTTAGCTCCTCTAATTTCTGGCTAAAGAAATGAAA ..x.x.:.:.....:x...x.-------.:..x...::...::.:..x:.......:.------------........::.x......::..........x....:x:.:::x.:..x.xx.x....x.....:::x:.....:::...x:..:x....-..::x..::.--......x.::xx.x.x...xx....------------:..x....x:.....x.x... 21M7D30M12I89M1I10M2D25M12I21M 128/196 65.3% 221/94230402 0.0% 34/196 17.3% 122859813 67354742 +3086 chr4 + 190214555 152010379 152010378 152010440 62 CTATTAAAACACAGCACTGCACATTAAAATCTCTACTGTATCACTGCAGATCTACTTAACAA chr4 + 94230402 7337270 7337269 7337331 7337270 7337269 7337331 62 CTGGTTAAACACAGCACTGCATAATAAAATCACTGCTGCACAAGTGCAGCTGTACTGACCAA ..:x.x...............:.x.......x..:...:.:x.x.....x.x....x.x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 144673109 45541446 +3919 chr4 + 190214555 152010379 152010378 152010533 155 CTATTAAAACACAGCACTGCACATTAAAATCTCTACTGTATCACTGCAGATCTACTTAACAAAGGCGAGGTCCCCAGAAAGCACTATTCACTT--GCTGAGAGTTGCTGCAACAGAACAGGAGAAGTCTCTTATGGCGGAAGAATTTAAAGGGGAAA chr4 + 94230402 7337487 7337486 7337637 7337487 7337486 7337637 151 CTGGTTAAACACAGCACTGCATAATAAAATCACTGCTGCACAAGTGCAGCTGTACTGACCAAAGATGTCATTCTT-GAAAGCTATGTTCACTTCAATAGGAAGTTTCTGCTCAAGAGTAAAA-----TTCCTGGGGCAGCAAAAAAAACAAGAGAAA ..:x.x...............:.x.......x..:...:.:x.x.....x.x....x.x.....::.xx:.:.::-......xx.:.......--::x.::....x....xxx...::.::.-----:..:.:x...:.x.:..xxx.x.:.:.... 75M1D17M2I27M5D30M 97/149 65.1% 151/94230402 0.0% 8/149 5.4% 144672892 45541663 +3013 chr4 + 190214555 152020219 152020218 152020281 63 AAGAGAGACAGAGAGAGAGAGGGAAGAAAGGAAAGGAAAAAGGAAAGGAAAGGAAAGGAAAGG chr4 + 94230402 3574026 3574025 3574088 3574026 3574025 3574088 63 AAACGATGCAAAGAGGGGGGGTGGGGAAAGAAAAGGAAAAAGGAATGAAAAAATAAAAGAAGG ..:x..x:..:....:.:.:.x.::.....:..............x.:...::x..:::.... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 148446193 41768362 +3749 chr4 + 190214555 152034352 152034351 152034424 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.x:.x...x::...........:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 76001147 NA +3383 chr4 + 190214555 152037373 152037372 152037451 79 GTGGTGGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTTGGGAGGTGGAGTTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...--....:.:...........::........x.xx.x...x.:.......:::.:..x.xx:.x:..... 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 76004172 NA +3150 chr4 + 190214555 152040345 152040344 152040411 67 GCAGAATACAGCGTGAGTTTTTGTTTCTTTGGTGTTTTCGGCTTTTTTTTTTTTTTTTTTTCCAAAT chr4 + 94230402 39845817 39845816 39845880 39845817 39845816 39845880 64 GTAGAAT---GCGTAACTCTTAGTTGTTTTGGGGTTGTGGGGTTTTTTTTTTTTTTTTTTGCTAAAT .:.....---....:.x.:..x...x:.....x...x.x..x..................x.:.... 7M3D57M 51/64 79.7% 64/94230402 0.0% 3/64 4.7% 112194528 78020027 +3347 chr4 + 190214555 152049760 152049759 152049803 44 TGTTTGTTTGTTTGATTTTCTTTCTTTCTTTTTCTTTTTTAAAT chr4 + 94230402 91445969 91445968 91446012 91445969 91445968 91446012 44 TGTTTGTTTGATTAATTTTCTTTTTTTTTTTTCCTTTTTTAAAT ..........x..:.........:...:....:........... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 60603791 NA +3042 chr4 + 190214555 152072445 152072444 152072502 58 CTCCCTCGCTGCAAAGAACAAGGTGGCTGTGGGGTGACTGGAGGTGAGAGGGAAAAAA chr4 + 94230402 61451154 61451153 61451211 61451154 61451153 61451211 58 CTCCCCCACCACAAAGCAGTTGGGGGCTGGGGGGCGGTTGGAGGTGAGGGGAAGAAAA .....:.:.::.....x.xxx..x.....x....:.::..........:..:.:.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 90621291 NA +9216 chr4 + 190214555 152075027 152075026 152075237 211 ACTCTGCTCCAAGATTATGAGCGAGTGACAGCACAGCCTTTCAAGGTGTGCTAAATGAGAAATGTGCAATTTAGGCAGAGCATTCACATGTTTGAATGGAGGATGGCAACTGTCGAGGCTGCCGGCATTGAACGGAAATTGATGTTCTGGTTGCTATCTACCTAGCAGAAATGAGTTCTGGGAAATCAGCCTCAGCAAGAGGGACAGAGGA chr4 + 94230402 34733397 34733396 34733602 34733397 34733396 34733602 206 ACCCTCCTCAGAGATTATGAG----TTGCCGTACGTATTTTCAAGGTACGCTAAATGAGAAACGTGCAATATAAGCAAAGCATTTGCATCTTTGAATGAAGACTGA-AACTGTTGAAACTGCAGCTGCTGACAGGAAAATGATGTGCCAGTTGGTATTTACCTAGCAGAAATTAGTTCCCTGTCATCAGTTTTATTAAACTGGCCAGAGAA ..:..x...x:..........----.x:.x.:..:xx:.........::.............:.......x..:...:......::...x........:..:x..:-......:..::....x.x:::...xx.....x......x.::....x...:..............x.....:xx.xx.....::.:.x:..:xx..x.....:. 21M4D81M1D104M 149/206 72.3% 206/94230402 0.0% 5/206 2.4% 117341630 72872925 +3159 chr4 + 190214555 152097403 152097402 152097530 128 TCTAACAAAAAAAAAAAAGAAGAATGAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA---GAAAG---AAAGAAA---GGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 54011587 54011586 54011723 54011587 54011586 54011723 137 TTTATTAGAAAAAAAAACAAAGAAAGCAAGAAAAAAGGAAAACATTCTGAAACATAATAAAGAAGGGTGAAAATGCTAAAGTTTAAAAAAATTCATAGCATGGAGAAAAAGCAAGAGACGAAGGAAAAAAAAAAAAA .:..x:.:.........x:.....x.x:.....:......::x.xxxx.:..x:x.:x..:.....:x.:...---x....---...:...---:x.:x.x:..:.:..:.x....:.x:..:.....:....:... 73M3I5M3I7M3I43M 83/128 64.8% 137/94230402 0.0% 9/128 7.0% 98085816 92128739 +3328 chr4 + 190214555 152097406 152097405 152097553 148 AACAAAAAAAAAAAAGAAGAATGAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAGAA---AGGAAAAGAAGAAAG chr4 + 94230402 59372612 59372611 59372755 59372612 59372611 59372755 144 AAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAG-------GGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG ..x:.....x..x..x..x......:.:::x:...::.....:..::..x:.x::...-------.....:x.:x..x:.....:x:.:x:.x.:.......:x..x..x..:..::..x.:x....::x:..---.:x..:..:.:.... 58M7D68M3I15M 86/141 61.0% 144/94230402 0.0% 10/141 7.1% 92724794 NA +3082 chr4 + 190214555 152097447 152097446 152097545 99 GGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGGAAAA chr4 + 94230402 11181405 11181404 11181498 11181405 11181404 11181498 94 GGATGGATGGA--GAAGCGCTGAAGGGGATGGAGAGAG---GGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAA ...x...x...--....x:xx.....::.x::...:..---...x.x.x.:.x::...x::....x:x.::................x......:.... 11M2D25M3D58M 65/94 69.1% 94/94230402 0.0% 5/94 5.3% 140916042 49298513 +4818 chr4 + 190214555 152097450 152097449 152097695 246 AGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAA----AGAAAAGAAAAGAAAGAAAGGAAAAGAAGAAAGGAAAAGGAAGAAAGAAAAAAAGAAAGGGAGAGAGAGAGAGAAAGAGAAAGACAGAAACAAAGAGAGAAAGAAAGACAGAAAGAA----AGAAAGTAAGAAAGAAAGAGAGAAAGAAAGATTGAGAGAGGAAGGAAGGAAGGAAGGA chr4 + 94230402 75994996 75994995 75995235 75994996 75994995 75995235 240 AAGAAAGATGTGAGGTTGTAGTCAGAGGAATACCGCACACAAGAAGGTAGGATGAACATGACAATAAGAAACCTAAGAAGAGAAAACAAAGAAATAGAAGGGAGAAAGATTTAGGAAACATGAA--------------AGAACTAGAAAAACAGCAAGGGAGAAGCAATTATGAAAACAACAACAAAAAAAACCCCAAACAGCAGGCAATGAAGAGAATACAACTTGTTAAGAAAAGGAGAAAAACAGAAAGAA .:...:..x.x:...xx.x.:xx.:..:..x.xx.x.x:x.....:.x.:..x.:.x.x:.x:.x......----....:......x.......x::..:.:......:xxx.....:x.x...--------------...:xx...:...x..x...:x....:...xx.x::...x..x:...:...:..----.:.x..:.:.x..x:......:x.x:.xxx:..:...:.:.:..:..::x..:...:. 71M4I49M14D54M4I58M 143/232 61.6% 240/94230402 0.0% 22/232 9.5% 76102454 NA +3211 chr4 + 190214555 152097462 152097461 152097536 75 AGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAG chr4 + 94230402 71601026 71601025 71601100 71601026 71601025 71601100 75 AGGAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAAAG ......::.....:...:x......x::.x...x:.....:::x:.:x.x...x.x:............::.... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 80496436 NA +3028 chr4 + 190214555 152097566 152097565 152097694 129 AGAAAAAAAGAAAGGGAGAGAGAGAGAGAAAGAGAAAGA------CAGAAACAAAGAGAGAAAGAAAGACAGAAAGAAAGAAAGTAAGAAAGAAAGAGAGAA---AGAAAGATTGAGAGAGGAAGGAAGGAAGGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG .....:..::.:xx:x.............:.:.....x.------.....x.:..:x.::.x.x::..:xx..:.....:...:x:.:..:..::..x..x.---x...:x..x:..::...:..x:x.xx:..:... 39M6I57M3I33M 79/129 61.2% 138/94230402 0.0% 9/129 7.0% 100949187 89265368 +3841 chr4 + 190214555 152097568 152097567 152097730 163 AAAAAAAGAAAGGGAGAGAGAGAGAGAAAGAGAAAGACAGAAACAAAGAG--AGAAAGAAAGACAGAAAGAAAGAAAGTAAGAAAGAAAGAGAGAAAGAA-AGATTGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGG---------AACAAAGGCAG-GCTCTGAAAGCACCCAG chr4 + 94230402 51148379 51148378 51148554 51148379 51148378 51148554 176 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGGCGTCATCCAAACCACAGCAGAGGCCTGAGCACACACAG .:...:.::...xx.x...........:...:.:.:......::xx...:--::..x.:..x..:..::.x:...:.:x..:..:....::...::.x.:-.xx....::x.x.........:..x:x.xx:..:...---------...x.x:....-.x:....:x:...x... 50M2I48M1I37M9I11M1I17M 103/163 63.2% 176/94230402 0.0% 13/163 8.0% 100949189 89265366 +3292 chr4 + 190214555 152101919 152101918 152102021 103 AAAATGTGCAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAAAGAAAATCGCTGCATCATGCTGTCTTGTGTATAGTTGAATTTTCACATGCTGTGGAAA chr4 + 94230402 7875204 7875203 7875278 7875204 7875203 7875278 75 AAAATACTTAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAG----------------------GTCTTGGAATTAAATAAATTTT------CTGTGGAAA .....::x:...............................:..:----------------------......x:xx..:x.:......------......... 44M22D22M6D9M 62/75 82.7% 75/94230402 0.0% 28/75 37.3% 144226715 45987840 +7383 chr4 + 190214555 152107455 152107454 152107936 482 TTGCATGGACATCTCAATGTTTATGTAGCTGGAGGAGAGTCTGATGTGCATGCC---------CAAATGTCCAAGACTTTTCTCATAGACCAGGAAGAGTAAATTGGTGGGCCTCCCAAGGA--AAACAGTGGTGGGCCAGGGAAATGCCAGGAGGTGTGAAATGCAAACAAACTGCCTGGGTGACAATTACCCTTTTAATTTTTCAAAGGCTGAACTTGGAGCAATTGAT--GTGGTGCCTGTTACA-CATGACAGAGAATGTTACCGTGCTTCAGATGCAGTGCCTGTGTAAAGGGCAGTAATCTGGACAAAAGGAAGGGGCAGGGAGATGGAAGAAGGGAGGTCTGGAAGGAGAGCAGGAAGGTATGAAGTAAGGAAGGAGGGAAAGGAGGAGATGGAGAATTTGAATGGAAATTTAGTCTGGCCAATACCCAAATCTGGTTTC-TTCCTCTCAGCGTGAAGTGCCCTGATTGGATAAGGAATTCACTGCAAGC chr4 + 94230402 34740970 34740969 34741388 34740970 34740969 34741388 419 TTGAATTACCATATCAATGTTGTGATAGCCACTGGAAAATTGAATTAGTATGCAGGGTATTTGAAAGTCTCCATGGTTTTC-----AATGCAGAGATACAAAATAAAGGAACTCTGCTGGGATGAAGCAATGTTGGGTCAGCCAACATCCATCAGGCCCCAGAGCCAACCATATCGTCTGCCCTGTGGTTTTCCTTTCAACTGTTTTCAAGTTGAGCATCCAGTAATCGATCTGGGGTGCCAGCTGCATCAAGGCGGAGAGCGTCAACATGCTTCAAACACAGCTCACATGCA--------------------------------------------------------------GAGCAACAGAGTCTGAAAAAC-----------AAGGAAAAGACACAGAATTCAAACTGAAATTTGAATTGGCAAATATCCAGATCTGGTTTCATTTTTCTCAGTGTGAGATGCACTGGCTGGACAAGGAGCTCATTGCAAGC ...x..x:x...x........xxx:....::xx...:.:.:x:..xx.:....x---------x..:.x....x.::...:-----.:xx...::.x.xx....x::x.::.:::x.x:...--..:..:..x....:...xx..xxx...xx...:x:x.:.xx...x..x.::.:...xx:x::::..x:.....:..:.x..:xx.:.:...:.x.xx..:...:...--.x......x.:.:..-..x.:.:....::..:.x.:.......:.::...:x.x::..:.--------------------------------------------------------------.....:x.::..x....:x.x-----------.....::...::x......::..:x.......::x:....x....:...:..........-..::......:....::...x...::....:.....::...:....... 54M9I18M5D36M2I107M2I15M1I44M62D21M11D60M1I49M 251/404 62.1% 419/94230402 0.0% 93/404 23.0% 117366485 72848070 +3358 chr4 + 190214555 152111463 152111462 152111627 165 TAAATATATTTATTTATTATAGAGCTGGGATTGTACTGTTTTCTAACCCAATTTGACCTCTCTCTCTCTCTATATATATATATATACATATAAATAAATATATATATAAATATATATAAATAAATATATATATAAATATATATATAATA-TATAAATATATATATA chr4 + 94230402 91734579 91734578 91734720 91734579 91734578 91734720 142 TAGATATGTTTTCTTATGACAGCATATAGAT----ATGTTTTCTTATGGAATT--------------------ATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACTTCAAATACTCATTTA ..:....:...x:....x.:..x::xx:...----x........x.:xx....--------------------....x...::...::...x....:.x.x:.x..:.:.x...:...x.x...:.....:..:.:.......x.x...-.x:.....:x:..x.. 31M4D18M20D76M1I16M 95/141 67.4% 142/94230402 0.0% 25/141 17.7% 60376884 NA +3344 chr4 + 190214555 152111535 152111534 152111627 93 TATATATATATATACATATAAATAAATATATATATAAATATATATAAATAAATATATATATAAATATATATATAATA-TATAAATATATATATA chr4 + 94230402 91738225 91738224 91738318 91738225 91738224 91738318 94 TATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATATTTTATACTTCAAATACTCATTTA .....x...::...::...x....:.x.x:.x..:.:.x...:...x.x...:.....:..:.:.......x.x...-.x:.....:x:..x.. 77M1I16M 64/93 68.8% 94/94230402 0.0% 1/93 1.1% 60373310 NA +3082 chr4 + 190214555 152111884 152111883 152111930 47 ATATATATATATATTTTTATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 7268855 7268854 7268901 7268855 7268854 7268901 47 ACATATATTTCTACTGTTATATGTATATATATATTTTTTTTTTGTTT .:......x.x..:.x......:....................x... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 144843029 45371526 +3135 chr4 + 190214555 152151817 152151816 152151851 35 ATCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 + 94230402 75300453 75300452 75300487 75300453 75300452 75300487 35 ACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA .:................................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 76851364 NA +32955 chr4 + 190214555 152152829 152152828 152153802 974 AGAAAAAAAGGAGAAGCAGCAATTGCCAAGAGACAGTTGTTCAATCCAATAAAGTAATG-ATCTGTGCAAACTCTAATTATTGTATTTGCAAAACAATATGTGTATAATTTGTGAACTTT--CCCCCTCTCTTTCTAACACA----ATAAAGGATTCATTTCATAA---AAACATTTTGTGTTT-CTTTAGAAGATTTGGACAAAAACAATGCATC-TTTAACTCTGAAAACACAATAA-TGGATCCTTGAAAGATTTATCTGAAATCAAATGCAGTTGTCATTCTATATCGATTATCTTGGCTATTCATTATCATATCCAGTCCATCATTTATATGCAGATGACGCTATCACTTATGGTAGTAGATTATGCTGGGAGGAAGCTTAATATTATCTTCAAGCTGATTTAAATGAGCTTTAAGATCATCTGGCACAATCTAACTTACTCTTAAATATTAATGGAACAAAGATCATGTTATTTGGCTCAAAACAAAAATTGGGGGAAACTGAAAAACTGGCATGCAGCATGACCTT-------GTCGAAAAATCTCAACTATTCAAGATTTGAGGTCTATCCTGTCTTCACCTGAGACCAAAAATATAACTGATTAGCATGGAAGGATGGAA--GAATCAAAACTTCTTATTCAAGTACATATAGTTCTTATAGTTCTTTTTCTTCTCCTTAAGAAAAA---TTGTTTTCCATCTCTGCAGT----GTTGGAGTTATGTGCCTTGGGTTTTGTTGGTTTTATTTATCTGAATGCAGCTCAACATTTGTTAGCCAAGTTAAAGATGCTTTCTCCTCTCTATCTGGACAGATTTGCCTTGAATTATACATCTCATAAACATTACCGTCTGTCGTCTTTTAAACAATTGGCTAAAACTTAGAAGACTCTCAACATTTTGTTGGCATAATAGCTTCCCTCACACTCTATTTCCCAACATCAGAC--CACTTAACTCTTCTTGTTCAGTCATCCACATTTTC----ACAGCAAAATT chr4 + 94230402 34754191 34754190 34755159 34754191 34754190 34755159 969 AAAAAAAAAAAAAAAACACTAATAATTAATCAA-GGTCTGTCATACTGCAAGTATAATGGATCTATATGGACTGTAATTACCACACTTGAAAAG----AGTTCTACAATGTGGGATCTTTATTTTCTTTTTTTTTCCCCACAGAGGATAAATATTATATCTCATGATCCAAATCTTTTATGTTTTCTGTAGAATACTTGAAGTGAAACGATGCATCATTTACCACTGAAAACAGAGTAAATGGGTCCCTGAAGGATTTATTTTAAGTCAGATGCATTTGTTGTTCTATATTGATAATCTTTGCACTTCATTATCATATTCAACTCACCATTTATATGCAGATGACACAATCATTTATGATAATAGATTATACTAGAAGAAAGCTTAATATTATCTTCAAGCTGATTTAAATGAGCTTTAAGATCATCTGGCGCAATCTAAATTACTATTAAATATTAATGAAACAAAGATCATATTATTTGGCTCAAAACAGAAGTT-GGGTAAACTGAACAACTGGCAATCAATGCGACCTTGGAGACAGTTAGGAAATGTCAATTGTGAAGAATATG-GATACATCATTTTTCATCGTATGACTAA----ACTATTGATTAGCTGTGAAGATTTGAAAGAAAGCCAAAAATTTTATTTG---------TGCTCGGAAAATATGTTGACTTAGGCAAAAAGAAAAGATTTGTTTTC-----TTGCATTTTCAGTTTGTATTATGTACTCTGGGTTTTG--------------CTGATTGCTGCATTATGTTTGTTAGGGAAGATAAAGCATCTTTAACTTGGTTATCTAGGCAAATTTGCTTTGAATTATACATTTCATAAACATTACCGTCTGTCATTTTATCAACAATTGGC-AAAAAACAGAGAACTGTCAACATTTTATTGGTACATTATTCTTCTACTTCCTCTTTTTTCGTATCCCTGGCTTCAGTTAAGTTACAGTCTTCAATCTTACATGTTTTCTGAAATAGAAAAACT .:.......::.:..:..x:...x:::..xx:.-:..:xx...xx.::xx.:x:.....-....:.::::...x......::::.:...x...:----.xx.x..:...x..x..x....--:::.:.:.:...::xx....----.....x:x.x:..:....:.---...:x....:.....-..x.....x.:...:.xx:....:.......-....x.x.........x.:...-...:...:....:.......:.x..:...:.....x....::........:...x.....x..xx.............:..:::..:..................:.x....:.....:..:........:..:.:..:....................................................:........x.....x.............:............:.................:..:..-...x........x........xx..::::......-------..::::....x....:.:.xx.::..x..-.:.x:...x.x.:.:xx.x.:x...:..----.:x.:........xxx....:x.x...--:..x.x...xx.:.....::---------x.:..xx.x.:.x:x..xx...xxx.xx..::....---........-----:....x.----...x.x:......:.::.........--------------....x...x..x:x.::........xx...x.....xxx....xx.:.xx:.....:.:..:......:.............:.....................:.:..x.x..........-....xx:...::...x..........:....:.:.x..x::.:.:x.x:x....x...:.xx.:x:.x.:.--..x....x.:x:xx.x....:..x.x..::.....----.:..x....:. 33M1D25M1I34M4D22M2I20M4I20M3I15M1I31M1I22M1I257M1D35M7I29M1D28M4D27M2I20M9D36M3I8M5D7M4I26M14D122M1D71M2I35M4I11M 671/934 71.8% 969/94230402 0.0% 75/934 8.0% 117398638 72815917 +3361 chr4 + 190214555 152164230 152164229 152164292 63 TTTTCT-----TTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTCCTTCCTTCCCTT chr4 + 94230402 49829840 49829839 49829907 49829840 49829839 49829907 68 TTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT ......-----..x...:.x:.:x...........:..................:..::..:::..:. 6M5I57M 49/63 77.8% 68/94230402 0.0% 5/63 7.9% 102334390 87880165 +3004 chr4 + 190214555 152164236 152164235 152164290 55 TTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTCCTTCCTTCCC chr4 + 94230402 38772185 38772184 38772239 38772185 38772184 38772239 55 TTCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCCCC ......:.....:.x.....:...:.::.:..:.:::...:.x....:...:... 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 113392051 76822504 +3217 chr4 + 190214555 152164277 152164276 152164333 57 CTTCCTTCCTTCCCTTTCTTTTTATTTCTTTCTCTCTTTTCTTTTTTCCTTTTTTAG chr4 + 94230402 72001429 72001428 72001485 72001429 72001428 72001485 57 CTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAG .....:.:..x.:.::.x.....x.....:.....:....:....:.....:.x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 80162848 NA +12858 chr4 + 190214555 152165581 152165580 152165889 309 CTGGGAAGCCCAGC--AAAGGTTAAGATTTCAGGGCAAATATCAAATCTTGCACTGAGAAATCC-----CTGTGTCGAGCTGTGCCAAAACCAGATGTTTTTACTAGTAATTAGTATTATGATAATTCACTTAACTAGGAATAAAATAGGGCATGATTGTTTACTGCTGCCTGTT-TCCCCAGACATGCAGAGAAATGAGAAGA---------AAAATCTCAGAGGTTTTACTCTTGGCTAAACAGAATGATTTTCTCAATTAACCAGGAACGAACATAGCAACAAAA--TAATTTGCCCTTACATTATACAAGAGTTGTAAATAGAC chr4 + 94230402 34761166 34761165 34761482 34761166 34761165 34761482 317 CCGAGACCCTCAGCCTAGAGACTAAGA-----AGGCAAAATGCAAGCAATGTGTCAAAGAATTTGCCGTCTGTGCCGAGCAG-----AAACCAGATGTTTTTGCTAGTAATTATTATTATGATAATTCATTTAAGTAGGAATAAAATAGGGCATGATTGTTTACTGCAGCCTGTTCTCCCTAGACAGGCTGGGAAATGAGAAAAAAATCTCACAAAATCTCAGTGGTTTTATTCCTAGTTAAAT-GAATAATATCTTCGTTTAACCAGGAGTAAATATGGCTACAAAAACCAGTTTTCATACATACTGCATGGTAGCTGTGAAGAGAC .:.:..xx.:....--.:..::.....-----:......xxx...::xx..:::::.::...::-----.....:.....x.-----...............:..........x...............:....x................................x.......-....:.....x..x.:..........:.---------..........x.......:..:.:.:....:-....:..x.::..:x..........:::..:..:..x......--:.:...x.x:x:.:.:.::.:::x..:...:..x.... 14M2I11M5D32M5I13M5D88M1I28M9I31M1D43M2I38M 225/298 75.5% 317/94230402 0.0% 30/298 10.1% 117404415 72810140 +22959 chr4 + 190214555 152169815 152169814 152170349 535 ATGATTTTCAGCCAGACCAGCTAAGCCCTC--CAAGGCTCTCAGTTGGGTGGAAGCTCCTCCGGGTCCCAGAGGGGATTAGATAAGGATCTGGGGAGAAATTTAAATCCTGGATGGCAGCTGTAGGGGCTGAAATGAACCAGCCTATTACCCAGCACCTCTCTGACGGTGAGGGTTAATTTATCACATGGAATCCAATCACTTCTTATAAAACCAGTGCAGGTTTCATTTAGTTTGATGAGGTATATTGCAAGATTTCAGAAAATCAATTTTACTGAGAGCCATATTAAGCCCCAGGGAATAT-AACACTACATGTACCTCACATAAGTTTTTGTTATTACCCAGCGCATCACTGGGGAAATTATATACTTAGCCCAATGAAGGGTAATGACTACCTTCATTGTCTTGGGCAGCTCCCACCTTGCTTACCTCGGTGAAATAACAAATAAAAATGGTAGGGCTCCAAATTGGTACTTACCTACGCTCTGCAGAGTCAGAGGCATGATAAGAGTGAGCAAAAGCAACTTAATTTTCCAAA chr4 + 94230402 34762021 34762020 34762531 34762021 34762020 34762531 511 ATAATTTTCAGTT------GCTATCCCTTCTACAAG-----CAGTAAGTTGGAA-----------TCTCAGAGAGAGTAAAAGAAGT-CCTACAGACAAATTAAAATC-TAAACAGAGTCTGGAGGTGTTTAATCGAGCAAGTGCATTGCTGAGAGTCTCTCTGACAGTGAGGGTTAATTTATCACCCTGAATCCAATCACTTTATAAAAAGCCAGCGTGGGTTTCATTTACTTTGATGAGGTTTATTGCAGGATTCCACAAAATCAATTTTACTGTGAGCCATATTAAACCCAGGGGAATATAAACACTATATGTACTACACATAACTTTTTGTTATTGCTTACTGGATCACTGGGGAAATTATATGTTTACCATGAAGAAGGGTTATGGCTACGTTCATTGTCTTGGGCAACTCCCAGCCTGCCCATTGTAGTGAAATAAAA---CAAAATGGTAGGGTTCGGAATCAGCATTTAACATCTCTTCGTATAGCCTGAGGTATAGAAACACTCAGCAGCAGTGACTTGATTTTCCAAA ..:........::------....xx..:..--....-----....x:.x.....-----------..:.....:.::.x.:.x...x-:..:x:..x.....x.....-.::.::.x:x...x...x.:.x..x:..:.x..:x:...:.:x..x::.........:...................x:x..............:x..x...:....:.::...........x...........x.......:....:..x................x............:...x:........-.......:......:x.......x...........:.::.x:.x...................::...x.x::.x.......x...:....x................:......x.:...::.::x::.........x.---x............:..x:...::.:.:...x.xx.x..::.:.x..:.x....:..::x..x.x.x....:x..::....:.......... 13M6D11M2I4M5D13M11D22M1D20M1D194M1I140M3D91M 380/508 74.8% 511/94230402 0.0% 30/508 5.9% 117407794 72806761 +3324 chr4 + 190214555 152176730 152176729 152176818 89 TTTCTTTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTTT-------CTTTTTTTAGCCTTTAGA chr4 + 94230402 69163347 69163346 69163442 69163347 69163346 69163442 96 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTTGGCAGCCTTTGTGAAGCTTTTAAA ...........x.:.............:.::::.::.x..::.x:...:.x.:x..:.....x..:x.:..-------....x.xx...:....:. 71M7I18M 61/89 68.5% 96/94230402 0.0% 7/89 7.9% 83013383 NA +3111 chr4 + 190214555 152176735 152176734 152176796 62 TTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTT--TCTTTCCTTCTTTCCT chr4 + 94230402 66421019 66421018 66421082 66421019 66421018 66421082 64 TTTCTAAATTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTCCT .....xxx......:........:.....x......::...x...:--....:..:.:.:.... 46M2I16M 48/62 77.4% 64/94230402 0.0% 2/62 3.2% 85755716 NA +3241 chr4 + 190214555 152176735 152176734 152176801 67 TTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTTTC chr4 + 94230402 51335326 51335325 51335392 51335326 51335325 51335392 67 TTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC ....:.xx...:..x:xx..:..x..:.:::..:x..:.........:..............:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 100841409 89373146 +3166 chr4 + 190214555 152176750 152176749 152176806 57 TTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTTTCTTTTT chr4 + 94230402 56778484 56778483 56778540 56778484 56778483 56778540 57 TTCTCCTCTTTATCACTTATTTTGTTCTTTTTCTGTACCTCTTTCTTTTTTCTTTTT ....::.....x.:x:..x...:x..........x.x.:......:........... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 95398266 NA +12187 chr4 + 190214555 152191981 152191980 152192842 862 GTTTTTCTCTTCTTTAGACCTTCTGAAGGATTCATGCACCAAATAACTAAATTATGTCTTGGTAGCTAAACAAATTATGCAAAATTATATACCATGAATATTTTATAATTCTAAGCCCTGAAGCCA-GACTCCAGACAGTTTTATGTCTGCAGCAACCCATATCGTACCCAGATGAATTTGGCTAAAGACAAATGACT--TCTTTCTAAAGAACTTAACTTTTTCTCATGTTGCATTT--------TTCTT--TAAGAATGTCTCAAAGGTTTTATTGCA-AACAGATAACGATAGTAAATGCACTTCACCTTCCTCTT--------AGCAGGCAAAAGCAAGCGATTATGCTTCATATAACTTAACT-CTCTAAACACTGACAAGACTGC-TTAAGGTAAGCAGTG-GCCCAACTCAGGCATGCATTGAACAGATACGAATAAACAGGGCACAATCGTCCACGG---TTCAACTAGTTTCACATACTTCCTTTGTCTTAGAACTTGTCCT--AGCTGTTGAA----ATTGCCTACAAAATACA-------TTTTTCTAAATAATGAGGTTT---GAGTCACCCAGGGGTAGGAAGGAGAAAGGATTGCAGCTGCGTATGATCTCAATACTAAGAAAGATCAGAACTGCTTATACGTTACAGTTGGTTTCTTTCTCCTTCTTCTTTCTCAATTACCTTTGCTAGTTTTGAT------CCTCCCCTTCTGGTGTTAAAAG--AAAGACCTACCCTACCAAGGTT-CATGGCTGTGCTCTCAAAAAGACCAGCAGAAGA-AAATGATGAAAGTATAAGTTAATAAGGCTCTGCTGGCCCCTCTCCTTGGCTCCCAGGATGCAG-TCTTGCAGGTTAATGCTTCCAATTGAGCAACTTCAAAATGGCTGTGAATCCGAGG chr4 + 94230402 34765134 34765133 34766007 34765134 34765133 34766007 874 GTATTTTTCTTCTTTTTTTTTTTTTCATTATCTGTGAACTGAGGAACAAAATTGTGCTTCAGTAGCTAAACAAATTATGCAAAATTATACAGCATGATTATTTTATATCCCAGAACCCTGAAGCAAGGACTTTCAGTGGCTTTATGTCTGCATCAACCTGTGTCATACCCAGATGAATTCCACGACGGATATGTTCCCAGTCTTACTATTTTACTT--CTTTTTTTTTCTTTGCATTTGCCACTGATTATTAATAACTACATCTCAAGAGTTTTATTGTATGAAAGAAAATGGAAGTTACTGCAGTCAGCCTTCTTTCTGCTACTACATAAGGC--AAGGAAGCTATTCC-CTTCTTAATTCTGAATTGATTTAAAACTTTACAGAATCGTATAAAGGGAAATACTGTGGCAAAAAGAAAAATAAATTTAAAAAAC-TAGCTAAACTCTATTTCATCTGATACTGGACTGCACCTACTTTGATATATCTCTTTTTTGTTTTCTTTTGTTTTTAATACACTGAAGTATATTTTCTTAGAAATATATTTCCCCTTTTTCTATAAAATGTTAATTACAAAACCACATAGGAAGTGTATGG---AAGACTAGCTACTGTGCACT-------------GGAAAATGAGAGCAGTTTACAGAAAATATTTGAATTATTTC----------------ATTA-TTTAACTAGTTTTAATTAATGATCTTGCCTGCTTCTATCTAACACTAAAGAGCTGGCATCTTGAGATCACATGCATCTGCCCCTGAAGTGGCTGGCAAAACAGAAATCTTGTAATTATAACTTAACAAGGATTCTTTGGCACAGCTCACTGGTTCCTGGGATGCAGAGCCTGTGAGTTAATGCCATAATTTTAAC----TCCAAGTGGCACTGAATCAGGGG ..x...:........xxx::..:.xx.xx..:::..x..::.:x...x.....:..::.::............................:.x.....x.........x::.x:.:.........x.-....::x::::.:............x.....::.:..:..............:x:.x.x:..:.x:.xx.:--....x...xxxx....--......:.:x:x........--------..x..--...xx.::......::.........:.-:.x...x..:.:x...x.x....x.:x:.....:.::.--------.xx....--...x....x...x:-....x..xxx..x..:.-x.:....xx:.x...::.::.:-.x....x..::.x..-.x.x..xxx.::x..:x...x..x.:.:-:::x.....xxx::x:x...xxx:..x.---.x..x...x...x.:...::..:...x.x..xxxx:....::.--.xx:::....----...x:..xx:.....:.-------........x.x....xx:x..---:.::...x:...::xx.x.x..---...:x.x..x:...:.:.:x-------------.:..:..x...:.x.:...:.x:xx.:.x...:x..x....----------------....-:..x:........:..------:..:x...x..xx.:.:x..x:--.....x..:x.x.x:::..:.:-....xx.x...:.:::..:x.:.::...:..x.-....xx..x..x.....x....:....x.::x:....x.xx...x:...:...::........-x.:..:::........:x:x.x..x.:.----..x..:....xx......x.:.. 126M1I71M2I16M2D20M8I5M2I27M1I38M8I7M2D14M1D17M1I22M1I15M1I28M1D28M3I43M2I10M4I17M7I21M3I22M3D20M13D41M16D4M1D16M6I22M2I22M1I33M1I63M1I28M4D23M 520/819 63.5% 874/94230402 0.0% 98/819 12.0% 117426847 72787708 +3026 chr4 + 190214555 152210429 152210428 152210493 65 AGAAAGAAAGAGAGAGGGAGGAAGGAGGGAAGGAGGGAGGGAGGGAAGGAAAAGGAAATGAAAAA chr4 + 94230402 62301313 62301312 62301377 62301313 62301312 62301377 65 AAAAGGAAAGTGGGGAAAAGGCAGGAGAGACTGAGAATGGAAGGGAAAGAGAAGGAAATGGCAGA .:..:.....x.:.::::...x.....:..xx...::x..:......:..:.........:x.:. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 89909116 NA +4485 chr4 + 190214555 152211563 152211562 152211755 193 AAGACAGACGAAGGAA-AGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAAAGAAA-----GAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGG-------AAGGAAA-----GGAGGGAGAGAGGAA--GGAAGGAAAGGAGGGAGGGAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGCAAGGAAGGAAGGAAGGAA chr4 + 94230402 61281963 61281962 61282178 61281963 61281962 61282178 216 AAAATAAAAGTGGGAAGAGAAAGGGCAAAAGAACAGATGAAACCTGAAGGAAACAAAACACTGATAATGAAAATGAGAAAGTTACCAAGACAAGAATAGAAGGAACAAAAATCCCTTAAAGGAAATATGTGGAGGGAGAGAAATACTAGAAGCAAAGGAAAGACAGGGTAAGGAATAAATAAATGGAACGACAGAGAACAGAAATGGCAGAAGGAA ..:.:.:.x.x:....-......::x:......x::.x....---...:....x...-----..x.:x:.:..x.......xx.xx....x..::.x........x:..::-------.......-----...........::x.--:....x......::..x:.:.x......x::.x::.x...:x..x:...:xx..:..x.:x:....... 16M1I25M3I12M5I49M7I7M5I15M2I69M 129/193 66.8% 216/94230402 0.0% 23/193 11.9% 90929600 NA +3189 chr4 + 190214555 152211599 152211598 152211678 80 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..:..:x.:...xx.x...x.......:....:........:...:.x..:.xx.::...:.x.::.x.x:..... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 76970092 NA +3109 chr4 + 190214555 152211614 152211613 152211695 82 AAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGAGAGGAAGGAAGGAAA chr4 + 94230402 85790943 85790942 85791024 85790943 85790942 85791024 82 AAGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAA ....:.::.xx.:.xx:......::...:.:.......:...:::...:..::.x.....::.:.x...:x.x..:::.... 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 66420671 NA +3063 chr4 + 190214555 152211627 152211626 152211687 61 AGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGAGAGGAAG chr4 + 94230402 26216014 26216013 26216074 26216014 26216013 26216074 61 AGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ..x............:......x::.:...::::..:.....x::......::::...x.. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 125995613 64218942 +3257 chr4 + 190214555 152211634 152211633 152211691 58 GAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGAGAGGAAGGAAG chr4 + 94230402 26216017 26216016 26216074 26216017 26216016 26216074 58 GAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAG ..........:........x:..:...::::..:...:.x:.....:.::.....x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 125995617 64218938 +3785 chr4 + 190214555 152211663 152211662 152211755 93 GGAAGGAAAGGAGGGAGAGAGGAAGGAAGGAAAGGAGGGAGGGAGGAA----GGAAAGGAGGGAGGGAGGGAGGGAGGCAAGGAAGGAAGGAAGGAA chr4 + 94230402 1500702 1500701 1500798 1500702 1500701 1500798 97 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaa .....::...:.:..x.:.:.....:.:x..::...:.....:.::..----.:.......::.x:.:...x.:x.x.x::....x:.......... 48M4I45M 62/93 66.7% 97/94230402 0.0% 4/93 4.3% 150710961 39503594 +3572 chr4 + 190214555 152233242 152233241 152233315 74 GTGCGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:...........::........x.xxxx...x.:...........:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 76200038 NA +21273 chr4 + 190214555 152240325 152240324 152240994 670 AGCATGCAAATGCATTTCAAAATGAACTCATTTATGATTGCTTTAAGAAAAACTCCAACATAATGAGTTTCTGTGGCTTTATTTACAAAAAGG-GAACTTTCAGACTCTGCAATTACCCAAAGCAGTAAAGCAGCAAAGAAAGCCAGCATGTTAAATAATAATTGCAAATGTTATATAAATGAGAGTGGTTTGATTGAATTTATTAGATATGTGTTGCTGGCATTTTAAGATATAAAGCATTTATCACAAAATGATGATTTCTTCACTTAAGCTCATTAGGAAATCACACATCAATTCACACATAATTACAGGGGAATTTCTGCTGCTCCCCACAAATCATTACCATGTTAGCTGAAGTCGAATTGGTTTTTCCATGATTT-GGAAAGATGAGTTCTCAACAGGAA------CCCATAGAGAGA--GGAGCTA-----CACTTCCCTGGGGTCCCCACATCCTTGAATCAGTCAGAGGAAAGAGTGGC-CTAAGGACTTTACTACAAAAGGCTAGGACTAGTCCCAAGCAAGAGCTGAGGCTTTCTCTCC---ATCAGAATCTCGGCATGTGGATCACCCTGCTTCG--ATAGATGATGAGTTAAGAGTCTAGAGATA-TTACTTGCACCGGACA--------------AGTGATGACCACGATTTGAGAGAAAATTGGAAG----TAGGAG----TGAGAGAAGAGAAAAAAA chr4 + 94230402 34769958 34769957 34770657 34769958 34769957 34770657 700 AGAATTTAAATTAACTTCAAAATGAAGTAAATCATG---GTTCTGAGGAAAAAT--AACATAATGA-TTGTTATAACAGTGTTTATGAAATGCCAAACTTTAACACACAGCAATCAGCCAAAGCTATAAAACAGTGTCAAATACT-GCAC---ACATAATAATTGTAAATGTTACATGAGTGCGAGTAGCTTGATTAAATTTATTAGAAATGTGTTACTAGCATTTTAAGAAATAAGGTATTTATCACAAAATGATGATTTCTTCACTTAAGCTCATTAGGAAATCACACATCAATTCATGCATAATTACAGGGGAATTTCTGCCACTCGCTACAAATCATTACCACATTAGCTAAAGTTGACTTAATTTATCTGTGATTTCAAAAAGGTGGTATCTAAATAGGAAAATTAGCTCATACAGAGCATGAAACTATCAACCTCGCCACAAAGGACTTAGACTCCACTTATTTGTTAGACAAAGATGCACCTTTAAACTCCTTTATATGTAAAGCTCATACTTTTC---AGTGAGCTCTAAAGCTTTTCTTCCGATGTCGGAATCCCATATTATGGATC-CAGTGCCAGGTACTTAATGAATAGTTGATAGTCAGAGCACGTTTGCTTGCGCCAGACATGCTCATTGTTTTTAATGATCATTGCAGTTTGAGATTGAATTGAAAGGGTCTGGGGGAGGCTGGGAGATGGGGAAGGAA ..x..x:....xx.:...........x.x.x.:...---.:.:.:..:....x.--..........-..x:.:.::.xx.:....::...x.x-:......x.x..x.x.....:.x.......x:....:...::xx:..x:.:-...:---.x..........:........:..:.:..x....:.:......:...........x.......:..:...........x....:.:............................................................::.......................::...x.:..............::......:....:..x..::...x..::......-::....:..:xx...x..:.....------.:....x....x--.:.:...-----.x.x:.x.x::..x.::x:xx...x:xx..:x..:...x:..::x.::x.-:...:xx.:..xx..::x..:...x:x...xx..---..::..xx..:.:.....:::...---:..:.....:.:xxx.:......-.xx...:xx.--x.x:....xx....:.x....x:::x.::-..:.....:..:....--------------.:....x.:::.::.......xx:.....:...----.:..:.----..:....x.:.:..::.. 36M3D15M2D10M1D26M1I51M1D4M3D228M1I24M6I12M2I7M5I50M1I34M3D24M3I23M1D10M2I29M1I16M14I33M4I6M4I18M 463/656 70.6% 700/94230402 0.0% 58/656 8.8% 117470367 72744188 +3284 chr4 + 190214555 152253496 152253495 152253596 101 AATGTCT--TTCTTTTTTTTTTTCTTTTTTTCTTTCTTTTTTAATTTTATTATTATTATACTTTAAG-TTTTAGGGTACATGTGCACAACGTGCAGGTTTGTTA chr4 + 94230402 49122579 49122578 49122672 49122579 49122578 49122672 94 AATGTTTGCTTTCTTCTCTCTTTTTTTTTTCCCTTTTTCTTTAAATTTGTTTTTATTATATTGGAAGATTTTATGGT----------TGCGTGCTGGTTTTCTA .....:.--..::..:.:.:...:......:.:..:..:.....x...:..x........:.xx...-.....x...----------x:.....x.....x:.. 7M2I58M1I9M10D17M 68/91 74.7% 94/94230402 0.0% 13/91 14.3% 103130917 87083638 +3311 chr4 + 190214555 152266111 152266110 152266168 58 TATATATATATATATATATGATATATACATATATCGTGTGTGTGTGTTTGTGTATAAT chr4 + 94230402 93711964 93711963 93712021 93711964 93711963 93712021 58 TATATATATATGCTTACACCATGTGTATATATAATGTGTGTGTGTGTGTGTGTTTAAT ...........::x..:.:x..:.:..:.....x:............x.....x.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 58554147 NA +3291 chr4 + 190214555 152272119 152272118 152272191 73 GTGCACCTGTAATCCCAGCTACACGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCTGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x....:.:........x:.::........x.xx.x...x::........::.:..x:.x:..:..:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 76238915 NA +3228 chr4 + 190214555 152280542 152280541 152280614 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGGATTGCTTGACCCTAAGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x.:.x::.....x..:.::..x.xx:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 76247337 NA +3069 chr4 + 190214555 152297504 152297503 152297549 46 TGATCTGAGTTTCTTTTTCTTTTCTTTCTTTCTCTCTCTCTCTCTC chr4 + 94230402 30018930 30018929 30018975 30018930 30018929 30018975 46 TGGTATTGGTTGCTTTTTTTTTTTTTTCCTTCTCTCTCTCTCTCTC ..:.x.x:...x......:....:....:................. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 122278574 67935981 +3161 chr4 + 190214555 152315686 152315685 152315744 59 CCTTGAGCAAGTTACTTGGTATCTTTGTGTCTCAGTTTTCTTATCTGTAAAATGAGACT chr4 + 94230402 83501143 83501142 83501201 83501143 83501142 83501201 59 CTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCT .::..:....:......:::x.x.x....:..........::.:..........:::.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 68814543 NA +119728 chr4 + 190214555 152321242 152321241 152323188 1947 GAAGAAACAGG-CATACTAACATGAAAAAACACATTTTATTGCACTTAAGTTATAAGAAAATAAAATTTCTAAGTGAATCAAACCATAGACACAATCCCTTTAAAGGTTGTTTTCCTCCATCATGTCAGGTTGTTACATAACTAAAATTAACCAACTTGAATCTGATTGTTTTAAATCAGACTATAAATAAAACAAACAAAAAAATAAAC---------AGAAGGAGGAAAAAAGATCGCCTAGGATACAGTGTTAAACCACTTTCACAGTTCAGCTTGAGTTGTGGCTCTTGGAGAATGAGGCAAACCATTTGACTGTTTCATTCATTTTGTTTGTTTGCATGTGACGCCTTTACTACAAAAACTGAATAGTTTCTGCTTTGTCAGTTACTCAGAGCAATAAAACTGTAACAGTTGTTTT------CCCAAATACTGTAAAACACTAAGACTGACCAGCAACTTTATTTTAATTTT-GTGTTTTATA-TATTTTTAAAATATTTTGTCAGTTTTACGA---------TGTACGTTCAT-CCATTCACCACAGCCCTCAAAAAGAAAAG-TTTCTCCACAGAACAGGCAAGTAATAGCTCTGTTCCAAGGAATGTGTTTTAATTTTTGCCCAGATAAAA-GAAAATAAGCTTTGCACACACTCTCAATTCTTTACTTGCAGGCAAACTTCACTCTTTA-TTATCTGAAACTCTTCCATTCTCAGCCTCTTAGAGGCACAGATGGCTCAAGTTTCAGTGGCAAAAAGTCTTTTTTCCATAACCAAACTAGAGCAAATTTGGAATTCAGTCTGGGACTAAAACGTCACAGCAGAAAAAAAA---TAAAAAAAAATAATTTGCTTTTTTCTTTCTTTCATTTAGCAGCATAAATAAGTTTGGCCACTGGGAGTACAGTACAGGGTTGGGACAACAATCCCATATTTGAAGACCTACTTCTAGCACCAGCATCAAGAATTAAATCCATCTCAGGACTCACAGAACCCAGGACAACTT-GCCACCTTTGAGCAACATATGCATTGAAGAATGTATATGGAAGCAACAGTAAATAGATTAA-CAGAGGCTAATACTGTGATTGATTGACATTGGCAATGGTTGGCAAAAAAAA---------------------AAAAAAAAAAGCTTTTCATGATAACTGTACAAAAACAATTCACAGTAATTTTTTTAAGCTTTTCCACTCCAGAAAAATGACT-------------------TTTTGTTGCAGATGCTCTCTAATTAG-AAAGTCAACCAGTA-------------------------CTTGTTTTGA---------------------------------------TATTAT------------TGCAGTTCCTTTCTAGGTGTCTAGCTGTCAGTGGTAAAAGAACAGGCTAGCAGAATCTGTAA-----TGATGTTTCAGCATTAACACTGCCCAATGA--CCACTGGAGAAGAAAATAAAGAAATAATTGCACCTGGTTTGATTT-AGAAAGTCTCATTTTGCAAAGCTGCCCTCAGTCAAAAGTGAAGCC-TTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCTTAGTCTGTAGGTCTTTTCAATCTGTTGCCCCAAGCCAACATCCTGCACCACTGAGAACAAGGGATTTTTTTCTTTTTC-------------------------------TTTTCTTTTTTTCTTTTTGCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTTCACTTCATGTCCACATCAAAGTCCAGCACCAGCAGCTTGGTTTCTTCAGTCCCATTCCGACTCCCAACTGCACACACCAGCTTTGTGTTTGAGGCTCTGATCCGCCACACAACTCCCCCACTCCCCCCACTCTCCAATGTGACTAGGTTTCGAATAAATTCACCCGTTTTCAAGTCCCATAGTTTTACAGTTCCATCATCTGAGCTGGTAATTACAAAGTTCTTGTTGAACTGTAAACAGGTCACAGCACTCTGATGCTTGTTGGGACCTAGACAA--AAACCAAAAGAATTTAATTACTGGTTAGAAA chr4 + 94230402 34811526 34811525 34813632 34811526 34811525 34813632 2107 GAAAAAGCAAGACAGACTAACATGAAAAAACACATTTTATTGCACTTAAGTTATAAGAAAATAAAATTTCTAAGTGAATCAAACCATAGACACAGTCCCTTTAAACGCTGTTTTCCTCCATCACGTCAGGTTGTTACATAACTAAAATTAACCAACTGGAATCTGATTGTTTTAAATCAGACTATaaataaaacaaaaaacaaaacaaaacaaaaaaaaaaaaggaggaaaaaaGATCGCCTAGGATACAGTGTTAAACCACTTTCACAGTTCAGCTTGAGTTGTGGCTCTTGGAGAATGAGGCAAACTGTTTGACTCTTTCATTTCTCAT-CGTGTTTGCATGTGACATCTTTAC---AAAAACGTAA--GTTTTTGCTCTGTCAGTTCCTCCCAGCAATAA--CTGTAACAGTTGTTTTTTTTTTCTCAAATACTGTAAAACACTACGACTGACCAGCAACTTTATTTTCATTTTTGTGttttataatcttttttaaaaattttgtcagtttttttaatttttttttttGTGTTCATTCCATTCACCACAGCCCTCACAAAGAAAAAATTTCCCCACAGAACAGGCT-GCAATAGCTTTGTTCTAAGGAATGTGTTTTAATTTTTGCCCAGAAAAAAAGAAAATAAGCTTTGCACACACACTCAATTCTTTATTTGCAGGCAAACTTCACTCTTTAATTGTCTGAAACTCTTCCACTCTCAGCCTCTTAGAGGCACAGTTGGCTCAAGTTTCAGTGGCAAAAAGTCTTTTT-CTGTAACCAAACTAGAGCAAATTTGGAATTCAGTCTGGGACTAAAACGTCACAGCAGaaaaaaaaaaataaaaaaaaataatttGCTTTTT-CTTTCTTTCATTTAGCAGCATAAATAAGTTTGGCCACTGGGAATACAGTACAGGGGTGGGAAAACAATCCCGTAATTGAAGACCTACTTCTAGCACCAGCGTTGCGAATTAAATCCGTCAGAGGACTCTCAGAACCCAGGACAACTTTGCCACCTCAGAGCAACTTAGGCGTTGAAGAGTGTAGATGGAAGCAACGGTAAGTAGATTAAACAGAGGCTAATACTGTGATTGA----CGTTGGCAATGGTTGGCaaaaaaaaggaagaaaagaaaaaaaaaagaaaaagaaaaaGCTCTGATAA-AACTGCACAAAA-CAATTCACAGTACTATTTT--AGCTTTTCCACACCAGGAATG-GACTCTCTTTGTTTTGCGGTTGGTTTCATTGCAGACGCTCTCTGGTTTTTGAAGTCAGCCGGCAGCCGCTCACGGAGGCTGGGAGGGACCCTGCTCAGAGCGGGGCCGGGAGGGCGCCTTGCTGAGGGGGCCAGGGGGTACCAGCAGGCGTGCATGTGCAGCTTCCTTAAGGATCTCT--------GTAGTAAAATAACCTGGTAACAAGAACTGTAACTTTTTTTTTTTTTAACCTCCAGATTGCTCATGGAAGCAGCTGGAG--GAAAGTAAAGAAATAATTGCACCTGGTTTCATTTCAGAAGTTGTGTTTTTGCAAAGCTGCCC-CGGTCGAAGGTGTTGCCATTTTATGTGACGAGACAGCGAATGCCTCTCTTGTCAGTCAGAGTTTGTTATCGTTG--TCTTCTCCTTCGTAGTCTGTAGGTCTTTAGGATCTGTTGCCCCAAGCCAACATCCTGCACCACCAAGGACAAGGGAtttttttcctttttcttttttttctttttttctttcttttctttttttttttttttttttttttCAGGGGGA-GGGAAAGGAGAACATCGTCTACACGTTTGGACAAATTCATCTTT-CTGCCCTTCACTTCATATCCACGTCAAAGTCCAACACCAGCAGCTTTGTTTCCTCAGTCCCGTTCCGGCTCCCGACGGCGCACACCAGCTTTGTGTTGGAAGCTCTGATCCGCCACACGACGCCTCCGCTTCCCCCGCTCTCCAATGTAACTAGATTTCGGATAAATTCACCCGTTTTCAAGTCCCAAAGTTTTACAGTCCCATCATCTGAGCTGGTAATTACAAAGTTCTTGTTGAACTGTAAACAGGTCACAGCGCTCTGATGCTTGTTGGGACCTAGAAGAGCAAACCAGAACATTTTTGTTTCTAACGGGAAA ...:..:..:.-..x...............................................................................:..........x.:...............:.................................x.......................................x..x....:...x---------.:.......................................................................................::.......x.......:x.:x.-:x..............::......---......xx..--....:....:........x...xx........--................------.:...................x......................x.....-..........-.x.....x...x..............x:x.---------.x.::......-...................x........:-....:.............x-.:.......:.....:............................x....-.....................x............:.......................-..:...............:......................x................................-.::..............................................................---.......................-..........................................:............x.....x.........:..x.........................:.::x...........:..xx.......x..................-.......:x.......x..x..:.......:....x...........:....:........-......................----.:.......................---------------------.....:....:x:.:.x..:.-.....:......-............x.x....--...........x....:..x:-....-------------------...::.......:.......::..xx-:......:..:.:.-------------------------.:..:.:x..---------------------------------------..::.x------------.....:.:.:..xx:.:.x...--------..:......x...xx.x..:..::.x......-----.xx.x...:.:.x.:x.x.:...:..xx..--.x:......--....:........................x....-....:x.x.xx................-.:...:..:...xx...-..........:........::.:...............:.x:......:...x:.x--....:......x................xx:................................::..:................:....:-------------------------------....:.......:.....x........-...x.:....x.:...........:x..................-....:...........:.....:..........:............x.....:........:.....:.....:..x..:.................x..:.................:..x..:..:..:.....:...........:.....:.....:..........................x...........:........................................................:........................x:.--......:..x.x...x:..x..:::x:.... 11M1I198M9I112M1D24M3D10M2D32M2D16M6I50M1I10M1I30M9I11M1I29M1I19M1D49M1I58M1I74M1D65M3I23M1D147M1I61M1I22M4D25M21I21M1D12M1D19M2D21M1D4M19I26M1I14M25I10M39I6M12I22M8D32M5I30M2I9M2D34M1I27M1D17M1I56M2D90M31I27M1D44M1D284M2I31M 1686/1912 88.2% 2107/94230402 0.0% 230/1912 12.0% 117509716 72704839 +17239 chr4 + 190214555 152324168 152324167 152324419 252 GGTGAGTAAGACTTACCTTGCAATGTTTGTAAACACTGTCCTGTTTTGATATCCCAGATTTTAACTGTAGAATCTGCATTCCCAGAGACAAGAATATTGTCTTTGAGTTCCATTCCACTTGTTAACGACTGGTGCCCTGTTAACGTGTGAATGCAATTCCCTGTCTCCACATCCCAAACACGGATTGATGTATCAAGAGATCCACTCACCACATGGATACCATCAAACTACAAAAGACAC-AGTTTATTAGAA chr4 + 94230402 34814552 34814551 34814804 34814552 34814551 34814804 253 GGTAGTTTAAGCTCACCTTGCAATGTCTGTAAACATTGTCCTGTTTTAATGTCCCAGATTTTGACTGTAGAATCAGCGTTCCCAGACACGAGTATATTGTCCTTAAGTTCCATTCCACTTGTCAAAGACTGGTGGCCTGTGAGTGTGTGAATGCAGTTTCCTGTCTCCACATCCCAAACTCGGATGGAGGTGTCAAGAGATCCGCTCACCACATGGATACCATCAAACTACAAGAAAGGTAAATCTATTATAA ...::x.x.::..:............:........:...........:..:...........:...........x..:........x..:..x........:..:.................:..x........x.....x.::...........:..:....................x.....x..x..:...........:.............................:.:.x::-.:.:.....x.. 240M1I12M 212/252 84.1% 253/94230402 0.0% 1/252 0.4% 117509616 72704939 +18126 chr4 + 190214555 152326001 152326000 152326255 255 CTTACCTGTAATGAATAGACTCTATTAGTATGCCCCTGCAACGTGTGTAGACAGGTTTCAGTCTCTGGATCCCACACCTTTACCATAAAATCATATGCTCCACTAACAACCCTCCTGCCATCATATTGAACACAGCGGACTGCTGCAACATGACCCATCAAAACATGTAAACACTGGCCTGTCTCAATATCCCAAACCCTAAGAGTGGCATCTCGAGAACCGCTAACAACTCTGCAGAGGGAGAAACAGAAAAAC chr4 + 94230402 34818734 34818733 34818982 34818734 34818733 34818982 249 CTTACCTGTAATGAATAGACTCTGTTAGTATGCCCTTGCAGCGTGTGCAGACAGGTCTCGGTCTCTGGATCCCACACTTTGACCATAAAATCATATGCACCACTTACAACCCTTCTGCCATCATATTGAACGCATCGAACTGCAGCTACGTGGCCCATCAGAACATGTAAACACTGGCCCGTCTCTATGTCCCAAACTCTCAGTGTAGCATCTCGAGAACCACTCACCACTCT------GGAGGAACAAGAAAAC .......................:...........:....:......:........:..:.................:..x.................x.....x........:.................:..x..:.....x..x..:..:.......:..................:.....x..:........:..x..x..:..............:..x..x.....------....:....::..... 233M6D16M 217/249 87.1% 249/94230402 0.0% 6/249 2.4% 117507267 72707288 +3242 chr4 + 190214555 152326225 152326224 152326276 52 AACAACTCTGCAGAGGGAGAAACAGAAAAACAAAACAAAACAAAAAAACCCA chr4 + 94230402 67450350 67450349 67450401 67450350 67450349 67450401 52 AACAGCCATGCAGAGGTAAAAAAACCAAACCAAAACAAAACAAAAAAACCCA ....:.:x........x.:...x.xx...x...................... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 84875875 NA +13898 chr4 + 190214555 152328204 152328203 152328398 195 TTACCTTTTTTCATGAAGATGCATACAACGCACAGTGGAAGTATGCCCATATAAGGTGTGTATACATTCTCCAGTCTCTGCATTCCACACTTTGAGTGTCCGATCTGTAGATCCACTAATGATGATGTTGTCTCTCATTTGTGATGACCATACTCCACCTGTATGTCCCACTAATGTTCTCAGACACTGGAAAAA chr4 + 94230402 34820080 34820079 34820274 34820080 34820079 34820274 195 TTACCTCTTCTCGTGCAGATGCATGCAGCGCACCGTGGAGGTGTGTCCGTACAAAGTATGTATGCATTCTCCAGTCTCAGCGTTCCAGACTTTCAAAGTCCGGTCTGTAGATCCACTGATGATGATGTTGTCCCTCATCTGTGATGACCAGACTCCACCTGTATGTCCAACTAATGTTCTCAAGCACTGAAAAGA ......:..:..:..x........:..:.....x.....:..:..:..:..:..:..:.....:..............x..:.....x.....x.:x.....:..............:..............:.....:...........x.................x.............::.....:...:. 195M 164/195 84.1% 195/94230402 0.0% 0/195 0.0% 117508124 72706431 +8923 chr4 + 190214555 152329665 152329664 152329787 123 AACTTACTTTGCCTGTGACTGCTGACCAAACTTTTAAAGTGTTGTCATCAGAACCACTAACTATTCGGTTACCACAAAACTGTAAGCATGTGATCACATGATCATCATGTCCTTTCAGCACCT chr4 + 94230402 34823238 34823237 34823360 34823238 34823237 34823360 123 AACTTACCTTGCCGGTAACTGCTGACCAAACTTTTAATGTATTGTCATCAGAGCCGCTCACTATTCGGTTCCCGCAGAACTGAAGGCATGTGATCACGTGGTCATCATGGCCTTTGAGCACCT .......:.....x..:....................x..:...........:..:..x...........x..:..:.....x.:............:..:........x.....x....... 123M 106/123 86.2% 123/94230402 0.0% 0/123 0.0% 117506427 72708128 +11439 chr4 + 190214555 152330701 152330700 152330876 176 GTTTCTGTTACATTGTGCAGAGTTCAG----TTACCTTAGGAGATTTGAGTTCTCCTCGCCTCCAGTTAGTATCAATTCTGTGCTGTCTGATGTATGCACTTTTCCATGGACTGTGTATGAAACCTGGTTTTATTACTTTTCTTCTCTTGATGTGCAATGGTTCATCAATCCCTAAAGTG chr4 + 94230402 34824961 34824960 34825140 34824961 34824960 34825140 180 GTTCATGGCACCCTGCACACAGCCCAGCAACTTACCTTAGGCGATTTAAGTTCTCCTCGCCGCCAGTTGGTATCAATTCTGTGTTGTCGAATATAGGCGCTCTTCCACGGACTATGTATAAAGCCTGGTTTTATTACTTTCCTCCTTTTGATATGTAATGGTTCGTCAATCCCTAAAGTG ...:x..x:..x:..::..x..::...----..........x.....:.............x......:..............:....x:..:..x..:..:.....:.....:.....:..:.................:..:..:.....:..:........:............... 27M4I149M 144/176 81.8% 180/94230402 0.0% 4/176 2.3% 117505740 72708815 +10106 chr4 + 190214555 152332588 152332587 152332730 143 AACCTTACCCTCTTCTTTGCATTTCTCTCTCCAGAGAAGGTTGTCTTCAGCCAAAATTCTCCAGTAGCGACATGTCTGAGCTGCTTGTAGCAGGTCTTTGGGTTCCAGGAATGAAAGCACATAGAGTGCCAACTAAGAAAAAA chr4 + 94230402 34826989 34826988 34827131 34826989 34826988 34827131 143 AGCCTTACCTTCCTCTTTGCATTTCTCTCTCCAGAGAAGATTATCTTCAGCCAGAATCCTCCAATAACGGCACGTCTGGGCTGCCTGCAGAAGGTCCCTGGGTTCCAGGAATGACAGCACGTACAGTGCCAGCTGTAAGAAAA .:.......:..:..........................:..:..........:...:.....:..:..:..:.....:.....:..:..x.....::................x.....:..x.......:..:x:.:.... 143M 118/143 82.5% 143/94230402 0.0% 0/143 0.0% 117505599 72708956 +17146 chr4 + 190214555 152337633 152337632 152338621 989 TTATTAAGTCATGGCAATTTATCAATTTACAGCCCTCTTTACCACTAATTAAGAGTGTCAAACTG-ACAATACCGAATACCATAATTAGCATGACAATGTTTAAAGGTGGTAGCTGTTGAGTTATATATTCAAATAACACCCAATGAAGAATGTAATTGATAATCTTTACCTCTTTAGGGAGCAATGAAATGAAGTCTCGTTGAAACTGGGGTTCTATCACTTGCATCATATGTTTTACTTGTGTTGGTTCACAACTATCAATGAGTTCATCTAAAGCAAGCAATTTCTCTGGTCCACTCCAGCTCTATCAAAGAGA-------------------------ATTAGAAATTTTTATTGTTTTAACAGA-------------------TGTC--CCAAATTACAGGCTTATA----------AAGGAAAACTCACATCTA---CACACAACCAT----AGTTGATCAGGGTAGAACTGTATAAAA-------AGTGGCTCCT----TATAGTGACATTTTTTCCACAAG-------------GCATTGAAGAAG------GCATTTAATTTCATCACTTACCAACAACTTTTATTTCGTAAAAGGTTAAAAAAA------AACATGTT--TGACAGAAAAA-------------------TATTTTTTCAT--TACATT------------ATTATAATAGTTATATGTTCATCT-----ACCACCAA---GTCACTAACTGAGAAGCCAAAATTTTATTCCAGAAA--------------------------------------------CATCATTTTGGGTTACTGAGTA--------------------------AAT-------------AATAGAAAATTTTGAC----AATTT-----CTCTACATTCTTTCTAGTAAGCACCATAAAATTAGATGGTTTTAATAAGGCACTCATCTGAAAGGAGACGAG-----CAGCATCAAT--CAGAGAAAAATTAGTAACTGGATATATTACACATTTGACAACTGTCTTCCACAAATTAAACAG-------------GCTTTGATTTGTTATGTGAAAACAAATACACAATAGAAAATAGAATAAACAATAAAAACAATCAACAATAGAAAATAGTAGCTGA--TAGTGGTAAAATGAGAATATAAACAAAGGCCAAAAGAGGATAAGAAA-GAGATA-CACTATAAAAACACAAAAACACACAATCATGCTTCA chr4 + 94230402 34831422 34831421 34832623 34831422 34831421 34832623 1202 TTACTATGTCACAGCAGTATGTCAACTTAGGGACCTTTTTAACATCAGTTTACATCACCATGTTGGAAAAAAATGAATGCCACAATGAGCAAGGAAGTATTTAAAAG------------------------------------GTGGCGACTTGAACCCGTATTTCTCACCTCTTTTGGGAGCAAGGAAATGAAGTCTCTTTGAAACTGGGGCTCTATCACTTGCATCATGTGTTTCACTTGTGTTGGTTCACAACTGTCAATGAGTTCATCTAAAGCAAGTAATTTCTCTGGTCCACTCCAGCTCTG-CAAGGAAAAACAAAACCAACAAGCTTAGCCTATATTAGTAAGTGCCGTTGCTTTGCCAAAAATGCAAGTTGACTTTCCTTGTCAACCTATGTACAAGTGTACGAAAAGCCAGCAAGAGAAATGCTTATGTAAATTACACAAAAATGAGAAGTTAATCAACACAAAA-TATTCGAAATTACTACACTGATTCTTAAGCTAGGAAAGAATTTGTTATACACGCACGTATAGATTAGCAATTAAGTAGataataacatttaataataataattg--aaataattaaGCTTCTTTTGAAGTTGATGAAATTTATGCACATATTACTGACAACAAAGGGGTTGAAACAAAATTTGTTCTTTCTCCATTGTACATTCAAGTGAGGTAACTTTTAACCTTGATGTA-TCATCTGATGGACCAAAAACCTGAAATGGAATGAGAGGAAAGGAACTTTCTTCAGAAATACACTGCCTGCTTGTTACTGTGGTATGTCCCTATGTGACAATGCAGTATTTCAGAATCCTGGCTATAAAGCAACGCATACTTGTAGGTATCAATTTACACTTGAATAAACAGGAAATTTTGGCTGGTAATTTTCTTACTTCACATTTTGACTAATGGGCACCATAAAATCTGAAGATTTTAATAAGGCGCTCATCTGAGAGCAGAGCAGATTAACAGCATCATTTGTAGGAAAAAAACAATAACTGAATATACTGCACATCTGAAAA--GCATGCCTCAAACTCATCTGTGCTCATCATAGAGTTTAGATTTGTTATGTGAAAATAACT--TAAGGAAAAAATCATTTCTACAGGGAAAAAAA-AGCCAACAGCCACTGTTAACTGATTTAGCAACAGAATTAGAGCATGAACAAAGCCTCAGAGAGGAGAAAAAATGAGACATCAGTTTTTGAGAGCAAATTCACATTCACATTCTTCA ...:..x....::...:.x.:....:...x:.x...:....x..::.:..x.x.x:::..x::..-.x..x.x:....:...:...x....x.:x.:.:......:.------------------------------------:..:x..x.xx..::x:..x.::.:........x........x.............x............:.................:.....:....................:.......................:.........................:-...:..:.-------------------------.....x..x.x:::...:...:x..:.-------------------....--..x.xx....:.:x..::----------...::...:x.x:..x..---:......xx..----....:....:x::.:..-.:.x::...-------.x..::..:.----..x::x::x....x..x:...x.-------------...x.x...x..------:........xx:.x:.x..:--..xx.x..xx::...x.xx:.:...:.x:...------x....:..--.....:x...:-------------------.x...:.:...--......------------x..x...:xx.x..:.:-......-----....xx..---.xx.:x:.x.....:.xx.::.x:..x:.:......--------------------------------------------..x:....::.:x.x...:x..--------------------------...-------------..:..:........:.----.....-----..::.....:.xx...:.::............:x..x.:............:.........:..x...xx..-----........x.--:..::.....x:.:......:.....:.:.....:...x..--.:x.x..x....:.x.x.x.-------------.:..x.................:..x.--xx.:x.:.....x:xx.xx...:x:....x..-x:x...:..xx.x.:x..:....--...::::.:...x...::..:.......x.:x.:......x..:...-....:.-..x.x.xx:.:x:....xx....:xxx...x..... 65M1I41M36D165M1D8M25I27M19I4M2I18M10I18M3I11M4I17M1D9M7I10M4I23M13I12M6I20M2D32M6I8M2I11M19I11M2I6M12I17M1D6M5I8M3I36M44I22M26I3M13I16M4I5M5I72M5I10M2I41M2D20M13I27M2D32M1D23M2I47M1I6M1I36M 658/943 69.8% 1202/94230402 0.0% 305/943 32.3% 117506211 72708344 +11358 chr4 + 190214555 152346925 152346924 152347125 201 GTCACCTGAAACATTTTTAGCCATTCCTGGAGGCCTGTAGGTGGCTGGACAGATGTAATTCGGCGTCGTTGTTGCCCTTGGCCATTGGCTGCTCTGAGGTCCCCAAAAGTTGTTGGTGTTGCTGAACATGGTACAAGCCCAGTGGTACTACAAAAAAAAAAAAAAG-AGAGAGAGAAAGGATAAAAGGAAAAAAACAAAAGT chr4 + 94230402 34838180 34838179 34838378 34838180 34838179 34838378 199 GTTACCTGAAACATTTTCAGCCATTCCTGAAGGCCTGTGGGTGGCTGCACAGATGTAATGCGGCGGCGCTGCTGCCCCTGGCCATTGGCTGCCCTCAGGTCCCCAAAAGTGGTCGGTGTGGCAGAGCATGGCACCAGCCCTGTGGTACTGGAATACAAAGTGAAAGTTGCGTGTAAAACAGTGA---GAAAAAAATTAGAGT ..:..............:...........:........:........x...........x.....x..:..:.....:..............:..x..............x..:.....x..x..:.....:..x.....x........:x..x.x...:x:....-x.x.x.x:...x::.:.---........:x.:... 166M1I17M3D15M 159/198 80.3% 199/94230402 0.0% 4/198 2.0% 117508745 72705810 +8040 chr4 + 190214555 152350037 152350036 152350145 109 ATTACCTTGTATATTCTGAGACTTTGCATGGTTTCTTTCCCAAAGAAAAAGAGCGGACCTCAGAACCATGGTCCAACTTTCTTTTCATCTATAAGGTAAAACAAACAAG chr4 + 94230402 34841326 34841325 34841434 34841326 34841325 34841434 109 ATTACCTTGTGTATTCTGAGACTTTGCAGGGTTTCTTTCCCAGAGAGAAAGAACGGACCTCGGAGCCATGGTCCAACTTTCTCTTCATCTGCAAGGTGAGGGAAAAGAG ..........:.................x.............:...:.....:........:..:.................:.......::.....:.::x...x:.. 109M 93/109 85.3% 109/94230402 0.0% 0/109 0.0% 117508711 72705844 +3054 chr4 + 190214555 152359586 152359585 152359652 67 CTCAAAAACAAACAAACAAAAACTACCAAAAACAAAACAAAACAAAACAAAACAACAACAAAAACCA chr4 + 94230402 61000011 61000010 61000077 61000011 61000010 61000077 67 CTCAAAAACAAACAAACAAAAAAAACAATAAGCACATCAATTAAAAATATTGCAACAACTAAAATTA ......................xx..x.x..:..x.x...xxx....:.xx:.......x....::. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 91359575 NA +3419 chr4 + 190214555 152361835 152361834 152361908 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTAAGGCAGGAGAATTGCTTGAACTCGGGAGGTGGAGGGTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::.....:..x.xx.x...x::.......:.:.:..x.xx:..x..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 76328631 NA +3091 chr4 + 190214555 152362818 152362817 152362870 53 CTCTCTCTCTCAAAAAAAAAAAAAAAAAAAAACAACAAGA----ACTTGGAATAGTT chr4 + 94230402 26392946 26392945 26393002 26392946 26392945 26393002 57 CTCTCTCTCTCAAAAAAAAAAAAAAAAAAAGATAATGAAATCACATTTTGGATACTT ..............................:.:..::.:.----.:..x.:...x.. 40M4I13M 44/53 83.0% 57/94230402 0.0% 4/53 7.5% 125969872 64244683 +30425 chr4 + 190214555 152367893 152367892 152368671 779 ATACTAAAGAAAAAACATACTAATATAAAG-----AAGAAAAAAACTGGTAAGTTTTTTTTGGAGGAGGTATGGTTTGCCATTTATTACTTTTTTTTTGTAAGAGTCGATTAATATTCTAAAAAGGTCTACGAAAAAGCTGAACAACCTCTCAAGCTCTGAATCCATGGCACTGACCTTAGGACTTTCTCAGAATGATTTTTAACGCACTCTGTTATTAGTAAAACCTGTTCAAACACATGCCCCATCTGCCAGCACCCCATCTGCAAGAGAGCTTCTTATTCTTGTAGACAGTACAACTTCTGCCTGTTTCCTTCTCTTCTCTACATACCAGCTGTATGGTAATGAGCATGAGCAGCTGAAAAATACTGCATTATAACAAAGCTAATATGAAAACAGCAGAATAGGACTTCCCTTCAATGAAGCAGTTGTAGCATGAACATAGCTGATAAGCTATTAAATAGAGGTAGGGGGTGGTTAGAATTTTACTTCTATGTGTGTGGGATGCCCGTGTGTGCGGATGCATGCATGTGTGTGTGTTAAATATGGAATTTCTGT----ATAACACAGAAATAACAAGAACCAAGAGAAGCACAGGGTACTAAAGAAAGGTCTAATTTTCTAAGTACTTTTGTTAAAATTTGTGAATCAGTTCTTTAAATGTTTTAAGTCTCAATTCTTATGTAGTAATGATATATCAGGTACCATTTTGACA------------AGACAGTTTTCA--------AATTTGTTAAAAAGTATGTTACATTTCTTAATTACCAAATT----------TTGGGGGCTTCAGTAGGAAA chr4 + 94230402 34868054 34868053 34868790 34868054 34868053 34868790 737 ATGCTAAAGGAAACAAACAATAAAGTGGGGGCAGCAGGACAGGATCTAACA-----TTTTTGCAAACAAT--------CCGTTTGTCACTTTGATGT-ACCGGGGTTAATTAATATTCTATAAAGGTCTTC-CAAAAGCTGAATA-CCTCTCAAGTTCTGAATTCATGGGGCTGACCTTAG-ACTTTCTCAGAATGATTTTTAATGCAGTCTGTTATCAGCAAAACCCGTTTAAACACATGTCCCATCTGCCAGCACCCCATTTGCAAAAGAGCTTCTTATACTTGCAGACAGTAAAGCTTCTGCCTGCCTCCCTCTCTCCTCTAAATACCAGCTGTATGGTAATGAGCACAAACAGCTGAAAAATACTGCACAGTAACAAAGCTGGTACGAATG-GGCAGAACAACGCTTCCACTCAATGAAGCAGTTGTAGCATGAATTTAGCAGATTAGCTATTGAACAGAGGTGGGGGGAGGTT---------------------TGGAA-----------------------------------AAAATGTAAAGGGTCTGCACAGATAGCAAGAAAATGAAAAGAGACCAGAGGGACACAAGCTACCAAAGGAAAGCCTAATTTCTAAAGTACTTTTGTTGAACCGCATGAACCAATTCTCCCAATTTTCTAAGGCTTATTCCTTGCGTACTAATGATATGCCAAACGCTATTCTGATAATTTGCACGTTCAGTTAATTTTTAAGGGAGACAACTTGTTAATGAAAGTTTTCCATTC----ATTAACAAATCTCCTCATGGGTTGGGGG---CAGGGGGAAA ..:......:...x.x.:.x...x:.:::.-----.:..x.::.x..:::.-----......x.::x::.--------..:...:.:.....xx.x.-::x:.:..::............x........x.-x..........:.-.........:.......:.....x:..........-......................:...x........:..:......:...:.........:....................:.....:............x....:........x.:..........::...:.....:.....x........................::.:..................:x:..........::..:...x:-:......:.:x:.....x:........................:x....x...x.......:..:......:.....x....---------------------...:.-----------------------------------x....:.::.:xx....:----...:..x::....:.x....:x.x....:::....:.x...:....:..:.:.......::x.............:..x:x::....:..:....::x...x..:....x..:.x.:...::...x.........::..::::.:...:...:.------------..x:.:....:.--------..:.......x:.:x:.x..x....:----....x.....:----------.......---...x:..... 30M5I16M5D14M8D19M1D33M1D13M1D35M1D213M1D82M21D5M35D18M4I154M12I12M8I26M4D11M10I7M3D10M 532/698 76.2% 737/94230402 0.0% 120/698 17.2% 117499839 72714716 +3748 chr4 + 190214555 152378865 152378864 152378966 102 ATGCGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCTCTTGCACCCAGGAGATGAAGGCTGCAGTAAGCCAAGATGGCGCCA chr4 + 94230402 76033196 76033195 76033289 76033196 76033195 76033289 94 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.:....--.....x......:...........::........x:xx.x.:.x.x....x......:..x.xx:.....:..------..x...::.... 9M2D73M6D12M 69/94 73.4% 94/94230402 0.0% 8/94 8.5% 76345669 NA +24471 chr4 + 190214555 152381619 152381618 152382625 1007 GTTTGTTAGTTCAGGATTGTCTATATATAAACCATATCGTAACTGCCACACAATAGCATGCTATTTTTATTTTATATAACAGCAAAAAG--TAGTGTTCCTATTAAGTTTGAATGTAAGGAATAGCA-ATTTAAAAAAATAATAC-----AGCTTAAGAGGCCAAAGAAGCCTAAGGATTTGGAACACTTTTTAACGAATGAAATGCTGTATTTCCCA--TGTATAAGGAGAATAC-------CATCAACT---------TTTTGCCTTTCATGCAA-----------------------AAACTACAAATTTACAGTGCTAATATTTGTCA---ACGTATTTCAAAAC---------------------------------ATACCTTTTTACATTTACTAATTTTA--GATAAATCTGCAGGATTCTAATTTCATGAAAAATAAATGAGAGAAAAAGGTGAACTGGGTAACCCTATCTTCTAGGCTCT-ATATCATATTATAAAACTATCACTTATATAAGTGTTTACTGGCTACACAATGCATTGATAGTTTTAATTTTAAATAAAAACTGAAATTTGAGGCATCTTTTCACTAAAAGAGGCCAAGGTACTTCACTTAAATAAACATTCATATTTTTCAAATGTGTGAGACTTACCCGTCTTCGACAAAAAGGGAGGCCTTGGGCAATGATGCTAATGCTAAATATCTTCATCACAGTTTGATGTGGTAGAGGCTCTTTTGCACTTTTAAGATCAACAGGAACCAAGCCATGGTTTAGAGTAGGTTTTCCCGGTTTTGACATTTTAAAACTCCTCTTGGTTGACGAATACTCTCTACATGTAATACAGGCACATTACT--------AAAAGCTCTA-ACCACTAAA-------------TTTTAAAAATATATATTTAATAATAGTTTTTAAAAGGCTGAGAACCCAAGGCCTGCTGCTTTTGTCTTTCAACCTTCCCCTACCAAATGTCCTGACCTGTCTGAGGCTTGGTGAAGTGCAAACTATCCTAGAATAGCCAGGAATTATAAACTACTGAAGTGAAAGC-TCCTGCTCCTGCCAGTCAAACAGCTGGTGAACCTCTCATACAAAGTCAG chr4 + 94230402 34887648 34887647 34888672 34887648 34887647 34888672 1025 GTTTGTCAGGCTAGGATTGTCTATATATAAACTATATCGCAACCACCACATAGTAACATGCTATTTTTATTTTCTCTAACAGCAAAAATGTTATCTCTGCTACTGAGTTACAAGAGTATTAAAACCATACTTTAAGAATTATTACTAAAAATGTTTAAATATTAAATAAGTTTAAGGTCTCTGAATTCTCT--------------ACTTTAGTTTCCAACTGTGTCGGTACAATTCAGAACGACATTAGATGGATTTTAGTTCTAACCTACCTGCAGCACCTAAAACAGCAAATAAAAGGAAACCACACATTTA---TGAATACATCTATTATATATGTATTTTTTCACCTAGGTGATATACATCTATATGATAATCTCTGTATATCCCTTTAAATTT-CTAAGATAAATGATATATCTGCA---TTTTAATT------AAAATGAAGCAGAAGAATCATTGAAATAAGTGACAAGA------GGGCTCTTCTATGACGCCATAAGACAA--------GGAAATGTGCA---GATCAGCACTTCATGGA---------------ATGAATAC---ACCATGACAAAGCTCTGAACCACAAG----CAAAGTG----------ATCAAAAGTCAGGTTTTAAAGATTTCTGC-ACTTACCCGTCTACGGCAGAAAGGCAAGCCCTGGGCAATGATGCTGATGCTAAATATCTTCATCACAGTTTGGTGTGGTAGGGGTTCTTTGGCACTTTTAAGATCAACAGGAACCAAGCCATGGTTTATGGCAGTTTTCCCAGGTTTGGACATTTT---ACTGCTCTTACTTTGTCAGG----TCTATTAGTAACGCACAAACATTGCTTAAAATAAAAAACCACTGCACTTCTAAAGTTGCATGATTTCTTTTAAAAGTATATGCTTCAAAGTGGCAATTCAGCG-------CCGCACAGCCTGCTGCCTTTGTCTCTCAACCTTCTCCTGCCAAGTGTCCTGACCCGTCTGCTGCTGAGTGAAGTGCGAGCTATCCTAGTATAGACAGGAATTAT--ACTGCGAAGGGGCAGGCAGACTGCTCCTGCCAGTCACACAGCTGGGGGACCTCCCCTGCCATGTCAG ......:..x::....................:......:...::.....:.:..:.................x.x............x--..x:x:.x...:.:....xx..x:xx.xx..x.x..-.:..x..:..x..x...-----.xx..x.:.x:::...x...::.....x:.:x...:x..:.--------------:..x..x..:...--...:.x:.x.x...x.-------...:.:x.---------..:.:x.:.x.x....:-----------------------....:...x.....---..xxx.:..:.:.:.---.:......:xxx..---------------------------------...:.::....x....-....xx.x.--....x.......---..:.....------.....:..xx...::..xx:x....x.::..:..xxx.------:......-x...x.::::....:..x.--------:x..:...x:.---.x.xx:..x.x...x..---------------..:..x..---.x:x...x:x.x..:.xx..:.x...----...:..:----------..x..x.x...x:....xx.:..x.x..x-............x..:..:.....x.:...:..............:..........................:........:..:.....x.....................................x:.:..x...:..x.....x........---...x.....:x..x::x.:x----....:xx....::..x:x.....:..--------....x.x..:-..:x.....-------------........:.....::..x.x.:.:.:xx..x.:x.-------x.x..x:.........:.......:.........:...:....:..........:.....xx...x:.........:.:.........x....x..........--...:.x:.:.x.x.:..-xx................x........x.:.....:.x.:.x.x..... 89M2I36M1I17M5I41M14D13M2I16M7I8M9I17M23I14M3D15M3I14M33I16M1D9M2I12M3D8M6D38M6D7M1I19M8D11M3D17M15D8M3D26M4D7M10D29M1D156M3D20M4D26M8I10M1I9M13I36M7D104M2D17M1I49M 664/914 72.6% 1025/94230402 0.0% 204/914 22.3% 117493971 72720584 +3032 chr4 + 190214555 152385752 152385751 152385803 52 TTTTAAATCAGTAAATAGCTGCCCTCAACTGGATAATACAGGGCATTGCAAC chr4 + 94230402 34892296 34892295 34892347 34892296 34892295 34892347 52 TTCTTAACTGGTGAGCAGCTGCCCTCAAATGGATAAAGCAGAGCACTGCAAC ..:.x..:::..:.::............x.......x:...:...:...... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 117493456 72721099 +35050 chr4 + 190214555 152411256 152411255 152411894 639 TAGATATGTAAAGTTTCTCAG----------GTTAACAATATATTGAATATAC-------------------TCACTTTTGTTGTTTTTGTATAGAATGGGGAGGAGAGTTGGTGAACGGGCAGGTCCACAATACTACTGGAGTTCGTGACACTGTTAGTATGTGTATGTTCATCTTCTCTGCTACTATCATCAGACTGATCAAAATCGTCACTCTCCTGGTCCATCTCCTCCTCCTCCTCATCCTCCTCATCTTGTTCACCAGCATGTTCTTCATCTTCCTCTTGTTCTTCTTGGTTTCCTGAGGAGTCCTCATCTACCGAAATAAATCTATTATTGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTTTGGCCTCCAGGTCTAGGTTCTACTCCAACAACTTCACCATTCCTTGCAGTGTGCTCCTCCTCTTGTTGTCTGAGTTGCTGTTGCTGTTCCTCCTCTACCACACGATTCATCTGTTCTTCATCTACCTGGCTTGAGGAAGGGTTACCTCTCAGAGAGCCTCCAGTTCGTCGTCTTTTGCTGCCCACAGAGAGCAGTTCCTGATTCATTTCCAAAAGCCAGCTTGCTACTTCTTGGACCTTGGCTAGACTATCAGAAGATGCAAAGGTTTTCACATTCTGCAGGGGAAAATAGGGTAAA chr4 + 94230402 34907975 34907974 34908626 34907975 34907974 34908626 652 TAGATATGCAAATTATTTTCGAAAATCCGGAGTTAACCA-ACATTAAAAATACAAAAAAAAAAAACTTTGTCTCACCTTCGTC---TTTATGTAGAATGGTGATGA---CTGGTGAATAGGCAAGTCTATGAGGCTACTGGAATTAGTAACACTGTTACTGTTAGCATGTTCATCTTCTCTACTGCTGTCATCAGACTGATCAAAATCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATC------TTCCTCTTGGTTACAAGTGGATTCTTCATCCACTGTAATAAGTCTATTGTTATTTTCTTCTAACTGTTCTTGCTGGGACTCACGTCTGTCATCAAACCCAGGTTCTTCTCTTAT---CTCTCCGTTCCTCCCAATGTGCTGCTCCTCTTGTTGTTGTCTTTGCTGCTGCTCCTCCTCTTCTACAACCCGATTCATCTGCTCCTCATCTACTTGGCTTGAGGAAGCATTAGCTCGAAGAGATCCACCAGTTCGTCGCCTCTTGCTGCCCACAGAGAGCAGTTCCTGATTCATTTCCAAAAGCCAGCTTGCTACTTCTTGGACCTTGGCTAGGCTATCTGAAGATGCAAATGCTTTCACATTCTAAAGAGACAAAAAAAGAAAA ........:...x.x.:.:x.----------......x.-.:...:..x....-------------------....:..:..:---...:.:........x..x..---:.......::....:...:.::.x:........:..x..:.........x.:.xx.:...............:..:..:....................:..:..............:...........:..xx....:..x.....x..............x.....x..------...:........x.xx.x...x..:.....:..:.x.....:......:..:........:......:..........x...:x.:x.:.x:..:::.:.......x...:x.:---:..x..:.....:x..:......x.............:xxxx......:....x:.....:.....x..x...........:..:........:.............x:...x...xx.....x..x...........:..:.......................................................................:.....x...........x.:...........:x..:.:x...x.::.x... 21M10I8M1D13M19I11M3D20M3D171M6D114M3D265M 501/623 80.4% 652/94230402 0.0% 45/623 7.2% 117503281 72711274 +3241 chr4 + 190214555 152414637 152414636 152414696 60 ATAAAATAAAGTTGGACTTTGCATAAAATAATGGCTGGAGAAAAGAACATTACTTTTCCT chr4 + 94230402 14595931 14595930 14595990 14595931 14595930 14595990 60 ATAAAATAAGGTCTGACATAACATAAAATACTGGATGGGGGAAAAAAGATTACTTCTACT .........:..:x...x.x:.........x...x...:.:...:..x.......:.x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 137818706 52395849 +3079 chr4 + 190214555 152418042 152418041 152418176 135 AAATGTTTTAACATCTG---AAAGATGTTATAAAATGGTTAACTTCATTAAACAAAGGTCATTTCACTCAT------TTAAAGAACAGCTCTTACCACACACACACACACACACACACACACACACACACAAAATCCACTTAGC chr4 + 94230402 22047733 22047732 22047868 22047733 22047732 22047868 136 AAGTATTTTAAAGTCTATGAAAAGAAGTACAAACTTGGTT-------TTAAA-AAATATCACAATGCTGATATGAGTTTAAAGCAAAATACATACAATAAATACAACCGTACACACACACACACACAAAAAAAACCTGCTCAGC ..:.:......x:...:---.....x..xxx..xx.....-------.....-...x:...:xx::..x..------......x.x.::x.x...x.:.x.:...xx.::.................x.x....:.::..:... 17M3I20M7D5M1D18M6I67M 88/127 69.3% 136/94230402 0.0% 17/127 13.4% 130370309 59844246 +3063 chr4 + 190214555 152419489 152419488 152419565 77 AGGTAAACACACACACACACACACACACACACACACACACACACACACAGAGTGGCAAAGTCTTAAAAAAAATGGAG chr4 + 94230402 60987254 60987253 60987330 60987254 60987253 60987330 77 AGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGCAAGACTATCAGAGCTATAGAAAAAATACAG ..:..:...x.:...:.:......x........::.x....x.x.xxx...x.:x..:..::x..:.......:x.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 91432235 NA +3178 chr4 + 190214555 152432688 152432687 152432754 67 TGCAGTCCCAGCTACTAAAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCACAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...:.........x:.:........x.xx.x...x..........::.:..x:x::..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 76399477 NA +3230 chr4 + 190214555 152445781 152445780 152445852 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCACTTGAACCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.xx..x..........:..:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 76412575 NA +55544 chr4 + 190214555 152448113 152448112 152451106 2994 AAAATAAGTGCTGCTGCTTTAAGTGGCCGGCAGTCTCACATAAACTCCAGGCTGAAATCACAACATCCATTAGAGTGCTCCACAGCTCAGAGCAAGCAAGCAAGTGGTTGTCAGTGCAGCTAGTAAATCACCTGATCCTATTACAAAATCAATTACTGCAGTGCATTTCCATTGCTACACAATCTGATGATGACAAAATGATATTGGATATCTACTGCAAGGTCAAGAAAACTGCTAAGAACATCTTTAATTGGTCTTTTATTTTTAATCATTTGGTCTTAGTCATAATGCATCCATTTTCATTGCATATTTTTATTTGAAATAAATCTATGTAGTTAC---CTTTGGTTGCCTGGGACATTCGATGGATAATCTCTGCAACTGGTCTGATGTATGGCTACAAGAGAACAAATCGGAGCAGCAGGTCGAACGGCTCAACCTCTTCATTAAAGAAGAAATAATGCTGCAGCCACAGCCACACATTGACTTGCTCATTAGATGAGAATTTGACTTAAAAAATCAGAACTGGTGATGTCACATATATACTCAAAATTGTCAAACTGCCTCATTCTGCAGCTCTCTGGCTGAAAGAAACACTACTAAA-AAAGAATAAAACAACAGCTTTGCTACAGAAGATGCCAGCCACAAACTCATCGCCAAGAAAAACTGGATATTAAAACAGAAGTCTCCCAGCTACTCTTTAGAAAGAAGGTAAGGTGCTTTAATATTTTAAATTGTTTTATATTAAAGCCCAAGTACTTAACAAAGGAGCAAACTCAAGA--------CACCCCAAAATTAT-----ACTAACCACTTTCTGTCTTCCATCAGTTTA-GATCTGTTTGCCTACTCCTTCAGCTCAGCCTATCCAACCTGTTCCCTCTGTAAATGCA--CACGATTTCAACAACCAACAGGAATGAGCTCCACCC-------------CTCCCCGTCTCCAC-ACACACTGTTCAAGAACCGTTTAATATCTGGAAAAGAACTGCTGCTGCATTGCTTTGAGAAACAACAGGGAGCAAATTACTGGATGGATTCTTTAACTTACCAATCAGAACTGCTGACCTTTTATGACTC---TACAATTCAAGAAGCCTGCCAAATACTCACAGTAAGAATAATCAACAAATTTTACTTCTATACTATAGATTAATTTACAGAATTGTTTTCAATCTTATTATTCAATCTACAATACAAAAATATAGGCCTAAGTATTTTTTAAATAAACAAAATGTAGACAGTAGCTAATACAAATCTTTGAGGACTGATGGA---AGAGGGTAGGAGGGTAACTGAATAAAA-TATACAAGCAAAAATTCCCTCTGGATACTTT----------ATGTAGACTTGAGAAGTAATGAACA-ATAAAAATCTATAGC---------AAAAATACTGGTGCAGAT------AATGATGTAATAAACAAGCTGGATAATC-----------------CAAGGAGGCTCCTGCTATCATAAATGTTAGAAGAGTTTTAATGAGAAAAAAGGACATATGGCTATA--TAGGTAGG--TACTGACCACAAGTAAAAAGCCATCAAAAACCTCATTGTTTTGATACTGAATTTTCTCCCACTTACTTGTCTGCATTTTATTTAAAAGATTATTTTAAAAACCACAAACCACCCTGAAAACATAAGCAACAATATTAAGTATGCTA--GCTAT-ACTATACCTTTTATACT-------TAAGCATTCTACCTTTGCCA-ATAATGCACAAAGGTATTTGTTTATACAATGTAATTAATCCACATTACAATTTCCAGGACAAGGGAGGGTCGCATTAATACAAATACTTTATAGTCTTCACAAATAATCATACTTCAAATTACTGTAACTTAAATGAACATTCATAGACCAATGATTG-----CTAATGTAAGAGCACCCTTTTTGG-GGAAGATAGTCTAAAACTAAATAAT----AAACACCTTGAATTAAAATACGTATTTTAAAACTTCCCATTGTC-TGTGACACTGAAA----------------GGTTTCTTCTTT---GTGTATGTAACATGCTCAATTTC---------TTCCCTGGTTTAAAGCTAAAAAGATCCAGCACTGCCTCTGCCTTCACCTTGCACTGCCCTTTTGATATTCATGTTATACTTAAATCAATTTCCAGAATATCTAAAAACAGGCATGCACTTCACATT---CAATTTTTTAAAAATCCTTTGGTAGATAAAGGCTATGGTAACAAACAAGAAAAATAATGCAGTAACCTTTTACTCGCCTGCTGGAGGTACTGTCTGCTGCACAGAATTTTAAATCCTCATCTGCAGATGCAATTGAACTGGGTATTGCCAAGAACTCTGCTTTTCCTGTGCTGCTGCTACACAGCTATTCATCGAAAGAGCACATTATGT--AGAATCTGAAGTACTATCAAATCTGAAGTTTAAGTTTCTTAAATG------AGCAAAAGAACTTC----TAAAATCTAGCTATACCCCTGCTCTGTCACACTTTCAGATGCATGCCAGCCACGTTAGCGAAAAATGTCCTAGTGCTGCTATGTACTC-CTAGCAAATGGGTAAGCTAGGGAAGCTAAGAGTAGTAATG-AAAAAATTAATACCACATACTAATGTAAAA-ACAAGTACCAGG------CATTAAAACCTGGTAGGATTTGTGTTGCCAAAAAATGTATAACCTGTCCATAACAATTTGATATTTGTATTAGTT----------TTCTAATTAAAAG-------------CCTATAAATAAATCATGTGTCTA-----ATATTACCAACAAGCATCAATTAAAAATCCCTGCCATACTGCTATT-------AATGAAAGTTATCTTACTAGCTAT-TCAGTCTGCATCAC--------------------TATTGTTTCTAAAGAAAACTATGAAATAAAAGATTCAAAGGTATAGA--ATACTTGTGAA-ATAGCTTGACTTGCAATGTTCCTTCCTCCTCGTCCCCCACACCAATA-TCCCTTGGATCTTATATTAATTATAACTTAGAGTATA----AGCAATATGACGTATT-TTCATTATTTATCATTTT---CCTTCCACAT--CAGCTAATTTGATGTATAGTATTGTTGATTCTTAGGTTGCAGATAGATGGAGCTGGAAGGCAAACCAACAAAGATAAGGTTTAAAAATTA chr4 + 94230402 34937129 34937128 34940067 34937129 34937128 34940067 2939 AAATTAGATGTTGCATCTCATAGCATCTAGCAGCTTCAGAGCAACTCAAGGCAGCAATCAAAACATCCATTACAGTACTCCACTTCTCAGAACAAGCAAGCAAGTGGTTGTCAGTGCCGCCAGTAAATCACCTGATCCTATTACAAAATCAATTACTGCAGCACATTTCTATTGCTATACAACCTGATAATGGCTAAATGATATTGGATAGCTACTGCAAGGTCAAGAAAACTGCTAAGAACATCTGAAATTTGTCTT---TTTTCATGCA---AATCCAAATTATGCAGCGCTC-TTTTAATGGTATATTTAGAATGCAAA-------ATATAGTTACCTTCTTCGGCTGATTGAGACATTCAATGGATAGTCTCTGCAACTGCTGCGTTGTATGGCTGAAAGAGAGAAGATTGGAGCAGCAGGTCGAACAGCCCAGCCTCTTCATTAAAGAAGAAATAATGCTGCAGCCACAGCCACACATTGACTTACTC---AGACGAGTTTATTCTTCACAGAATTAGGACCGGTACTGTCCCGTACAGACTCAAAATTGGCCAGCTGCCTCATTCTGCAGCCTGCTGGCTGAAATTAGCACTGCTAAGCAGAAAAGCAGCCCATATTTCTCCAAAAAAAGATGTCAG---CAGTCTCATCAGCAAGTAATACCTTGCCTTTAAA-AGATGTGTACGTTTTCCCGTTTACCAAG----------------------TAAGCTGCTCTAAAGAGAAGGCCAGCTGCCTAGCAGAGGAGTAAATGCAGGGATGGTTGTCCCTCCTAACTGCTCGCCGACTCTTCCCGCTGTGGCTTCCTTCACTTCAGGGCCCTTTTAGCCCCCCCAGCAGCACAGCCTATCCAGGCCAGGCCCCAGGCAGGGGCGGCCAC----------ACCAGCAGCACAGAGCCCCACCCTGCTGGCCCCACGCCCCTCATCTCCCTGGCACCCTG---------CCTCCAGCATCCTG------CCTCCTGCTCCC---------------------AGCACACTGCT--------------------CTCTCGGAGCTGCTGACCTGCCGTAACTCCTGTGCCTGGCAAGGACCCTCC-----AGTCACAGGGGGAGCAAT---GAGACCTTGCTT----------------------GTGCTGTGCTCAGACTTCTTGTGATGACTGGGGAAGAAAAAAA-------AGTCAGTTGCCACGT---CTGAACGCATGGGATAAATGCTAC-------TCAGGTCTGTTAAATCCTGAGATAAGAACGGCTAC--AACAAAGCTACGTGAGTGAGAATAACACCAGGAGAAGTCAACAGTAATAATTTAAACCTAGGATGAAAAAAGCATAAGAGAATTTCAAGTAGGATGTCAAAAGGTACTGGAACCAACTCTCCAAATGA-GTTACAGACAGCTGGTATAAGCAGCTTTAGGAAGGTCTGCAAGGAG--TCCTTCTCTT-------TGAGAAG---------GAAAAAGCAGTACAGAAAGGCATACCTACGTCTGACTACTCACTTGAATTAAACAGGTCTCCTAACC-------TTTAGAAA---------CTCCTATACCCTGGTTAAAATTATACTC--AATGTTTCTTTAACACACAAAATTGCTATTGGAAATAT-CTCATCATTACAAGAGATACTAATGCAATAACTATATCCCTTTTGCTTCCTATATAAAAATCTAAGTGACGCTGTAAAAAGCTCATACTAATTGGTTTAATAAATGTA-------TGCAATACTATTTCTGA---AAGGATGCCTCACATTAGCACAGCTGCTTAACCTGATTACGGGGTAAAATGACTTGAAATAACTGTCCCTT------ACGTCTATAGAGCTATCGGTGCTCGTCTCATTCAACAGCATCCTTTTTATCAAAAGGTTAACCAAAAGCAAGTGACACAAAAGCAGCTTTAATGAATGTATTTACAGC-AAACTTCTCATTATCATGCTGCATTCAAAACAGAATCTCGCCTCGGCtctctcccctcccctttacttgctctcccctctttccccctccctctccttGGTTTAAAGCTGAACTGA---------GCCTCTCCCTTCACCTTGCTCTGCCCTTTCGATATTCATGTTTCTATTAAATCCATTTCCGG----TCTATGTACAAGCATGCACAGCAAATTGCACAA----TAAAAAAACCTTCCGTAGATAAAGACTACAGATGCAAACAAGCAAAATAATGCAGTAACCTTTTACTTGCCTGCTGGAGGTACTGTCTGCTGCATAGAATTTTAAATCCTCATCTGCAGATGCAATTGAGCT-GGTATTGCCAAGGACTTTGCTCTTCCTGTGCTGATTCTGCACAGCTATTCATCGAAAGAGCACGTTACATTGAAAACTTAAAGTAATATC--------AGGTAAAATTACTTTAATGGCTTGAAAGGAACCAACTTTAAAAAAAAAATCAGCTATAGCTCTGACCAGTCACG-TTTCAG--GGATGTCAGACACGTTAGTGAAGAAAGTCTCATTGCTGATGCATGCTTGCCAGC-TATGGGCAGGATGTGGAAGCAGAGAGAGCTAATGAAAAAAATTAATGC-----ACAGATTTAAAGTGCAAGGACCGAGCTCTCACATGCAAAACTGCACGTGTCCTGCATGCCACGGGAAACAT--CTTTTTCACAAGCATTTATTGTTTGTACAACTGAAAAAAAAAATGGTCATGAAAAGCAACCCTCACATTCCCATACTTCGGTTACGGGTCTGCCAGTAGACTGCAGGTAAGTTTAACACAAATATCCTCACTGCACCTCTATCCCTGATAAATAGAAGCT------CTAGCTTTGTCCTTTGGCAGCACATAGCAAAGGACTGCACACATACATTTCCTAACAAGAGACACGAAAGGAAAGCATCAATATTTTTGATCATGGTTTTGAGTATAACGAGGTTAGGAAG--------------------CACAAGGGTACTTCAGCAGAACTTGTATTATTCTTAGCAGAAATTAAACACCAGCAGTAAAACCTGCTATTCATTATTTATGAATTTTACTCTTCCTCATGCCGGTTTCTTTAAT-----GTACTATTGATTC-CAGGATGCACACAGACAGAGCCGG-----TGACAGACAAGACCGAGTTTTATAGAATA ...x..::..:...xx..:xx..::x.::....::...x.xx.....x....x.x.....x...........x...:......xx......:.........................x..:........................................::......:.......:....:.....:...:.x...............x...................................xx....x.....---....:.xx..---::..:x.:.:..:xx..:::.-....x..x.:......xx.x.xx...-------..:.......---...:..:..x:..:.......:.......:............x.x:.x.........:x......:x.:..:.................:..:..:...................................................:...---...:...xx.x.xx:.:.x.:...:..:..:...:x....x.:..:.x...........x.x.:.................::x..........xx.:....:....:-.:.:..xx.:x.x.:.x:.:.x.x.x.:......:...---..:x......:x....x..x..:xx::x..x...-...x..x.x.xxx:.x.:x....xx...----------------------...::..:.:..x.xx:...x...:x.:.:..:..:.....:...:x..:.:--------.x.:..x..x.xx.-----...xx:.x.x:.x..x.....x...x..:.-.::.:x...:x.:x.:..xx....x...........:x.::xx...:xx.:.::x..:--...----------....:...x.xx....:......-------------.:..:.:.....x:-:...x...---------.x.::.::...:x.------x..x.....x.x---------------------....x.:.:..--------------------.xx..:..:..........x:::.:....---.:.xxxx....:.x...x.-----.x......x::..::...---x.:.::..:...----------------------.x::...x:...:x...x..:.xxx:x..:x::x.x.....x.-------.:x:.x..x::.x:.---.x:..:.:.x:x::..:x.:x...-------.x...x...x.::.---x...:xx..:.x..:x..--..:...:-..::::..::.:...xx.x:.x...x.xx.:----------..x..:..:.::..x.x..x:.:..-.x:.:...:.xx..:---------...::......x:.x:.:------.....-..x.:.:...:x:x.x....x.-----------------.......--....x..x.:-------.x.....---------..:...:x..x...x.x:.x:...--..x..xx.--....x..:xx..x....x..x:x..xx..x.-------...x..x.---------....:.:x:x..x..:x:x...x..:.:--..x:..x:.....x.xx..x..x:xx:x:..:...:..-xx..x..x..:x.::x..:...--..x..-......:.::..x.:..-------...:x..::x.x:xx:..::-.x..x..x..x.xxx...x.....xxx......-------::..x...x.....:::---....:x.xx..:.....::...:x.:...x.:xxxx..xxx:::...xxxx....x....x.....xx...------..:.::.....x.x..x:x..-----..x..x:..x....:.......:x-::...:.x:x.:....x:..:.:.:----..:..x...x...x..x:..:x..:xx:-.......:....:..-..:x:..:.x...----------------.x.:...:.::.---x.x..:x.:x:x.x.:.xx....---------:...:............:..xx..---------......x............x.........:............x:xx.......x......:.----....x:x...:........xx..x...---...----.x.....x....:x..........:...::.xx:........x........................:..........................:..................................:..-............:...:....:...........x.x..:........................:...::.--.:..::.:.....x....--------..x.x..:..x...x....------.:x:..xx.....:----x....x::.......x.:...x:.x.....:-......--.x...:...x........:...:..x...::.x.....x.:::.:..:-.:...-x.....:.:.x.:x......x:....x:x.....-...........:.-----..x:..x....:-:....x...::.------...xx...x...xxx.x:.::xxxx.....x:::.x::..--.:.x.:..:..xx....:x.:......:x.x.x----------.xx.x..x.....-------------..:...xx.x::.:.:.x....:-----.x.:.:.x:::...:x.x.xx:...x....:::.:::..:x....:-------...::...:.------......x.-..xx.:x...x...--------------------..:xx..:....x:.:.:x:.:....x:....xx....x:x.x.x..--..:x..x...:-...:.xx.::.x.x..x--------------------....xx::..-.:.xx::..x...:.....x.:x..:.xx.:.x..x.----....:..x:..x.::.-............x.x...---:.....x...--.:.:.xx...:..-----...:.:.......-:...x....x.:...::....:..-----x:..x:....::x::..x....x.:.x.. 258M3D10M3D21M1D26M7D10M3I151M3D108M1I38M3D34M1D28M22D52M8I14M5I30M1I58M2I3M10D23M13I14M1I8M9D14M6D12M21D11M20D29M3I19M5D18M3D12M22D43M7D15M3D24M7D14M3I18M2D7M1I31M10I25M1I15M9I18M6I5M1D22M17I7M2D10M7D7M9D24M2I8M2I31M7D8M9D28M2D38M1D22M2I5M1I17M7I20M1I33M7D17M3D71M6D21M5I24M1I25M4I28M1D15M1I13M16I12M3I23M9I24M9D62M4D27M3I3M4D132M1D70M2I18M8D19M6I14M4I31M1D6M2D48M1I5M1D34M1I13M5D12M1I12M6I40M2D33M10I13M13I23M5I46M7I10M6D8M1I14M20I47M2I11M1I17M20D10M1I37M4I16M1I18M3I10M2I13M5D13M1D24M5D29M 1851/2707 68.4% 2939/94230402 0.0% 519/2707 19.2% 117510984 72703571 +3045 chr4 + 190214555 152452581 152452580 152452637 57 GCAGTCCCTGGAGCAAAATTTAAAAATCTAGCTTATAAATACACGTTGAAAAAGAAA chr4 + 94230402 15670794 15670793 15670850 15670794 15670793 15670850 57 GCAGTCCCTGGAGCACACCGTAAAAATTTATCTGAAAAATACATGAAGGAAAGGAAA ...............x.x:x.......:..x..x.x.......:.xx.:...:.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 136781787 53432768 +3189 chr4 + 190214555 152457515 152457514 152457573 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.........:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 76424309 NA +3227 chr4 + 190214555 152466802 152466801 152466871 70 CGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.:....:.--...x......:.........:.::........x.xx.x...xx:.x.........:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 76433605 NA +3570 chr4 + 190214555 152471367 152471366 152471555 189 AGGAGGGAAGGAAGGAGAGAAGGAAGGA-GGGAAGGAGGGAAGGAAGGAAGGAAAAAGGGAAGGAAGGAGGGAAGGAAAGAGAGAAGGAAGGAGGGAAGGAAGGAGGGAAGCAGGGAGGGAAAGGGGGAGGGAAGGGGAAGGGAATGGGGAGGGAGGGAGGGAGGGAAGG-------ATGGAAGGAAGGAAGGAGAG chr4 + 94230402 41489229 41489228 41489425 41489229 41489228 41489425 197 AGGAGGGGATTGAGAAGAAAAGCACCTCTGGGAAAGAAGGAGGCAGGGAAGCCAAACGCCTTAGAAAAATGACAGGAGACACGGGAAGGAGCAAGATACAAAATAGGGACATATGGAAACCTAGTAGGAAGGGAAGGGCTGGGGAGGTAAAAAGAAACACGGATGAAAGGGGGTGAAATTGCAGGGAAGAGGAGGAG .......:.xx:..:...:...x.xxxx-.....:..:...:.x.:.....xx...x.xxxx:...::.x.:x....:.x.x:.:.:.:..x.:.:x.x:..:x.....x::.x...::xxx..x:...:..:.:...xx...:.x.x::.::..::x.x...x.:....-------..x.x...:.:..:.::... 28M1I141M7I20M 109/189 57.7% 197/94230402 0.0% 8/189 4.2% 110982138 79232417 +13163 chr4 + 190214555 152488327 152488326 152488541 215 AAAAACTTTCTATTTTCTCCTTAAGAGAAGGTCAACGGCTTTCACTTCACTTGTCTAACATAATCATGAATTGAAATAAGAACTCTCAGCTCTTTGGAACGACAATGCTACCAGTATGCCTAGGCCAATAAAGCGATTCGTTCATTAATGCTGCTAATAAAGCAACCTTTTGTTAGTCTATGAAACATCAGAAACCTTACAGA----CTCTAACTTTGC chr4 + 94230402 34963156 34963155 34963373 34963156 34963155 34963373 218 AAAAACTTTTTATTGT-GCTTTAACAGAAGGTCAATGGCTATCACTTCTCTACTCCGGCACAATGGTGAATTGAAACAAGAACCCATAGCTGGTTGGGCCGACAAAGCAACCAGTATGTCTAAGCCAATAAAGCGATTTGTTCATTAAAGCTACTAATAAAGCAACCTTTTGTTAGTCTATGAAACATCAGAAACCTCATAGAATTCATTTAACTATGC .........:....x.-x.:....x..........:....x.......x..xx..:::..:...x:..........:......:.x:....xx....:x......x..x.........:...:...............:.........x...:............................................:.:...----x.:.....x... 16M1D186M4I12M 178/214 83.2% 218/94230402 0.0% 5/214 2.3% 117525171 72689384 +3402 chr4 + 190214555 152496047 152496046 152496119 73 TGCACCTGTGGTCCCAGCTACTTGGGAAGCTGAGGTGGGAGAATTGCTTGAACCCAGGCAGTCAAGGCTGTGG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:...........::.:......x:xx.x...x::...........:x:x.:x:......:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 76462842 NA +3005 chr4 + 190214555 152500457 152500456 152500528 72 TTTCTGTACATATTCCTGAAGGTTTTGCTGCTTTGTCAGCAAAAAAAAAAAAAAAAAAAAAAAACTTTAAAA chr4 + 94230402 25555051 25555050 25555122 25555051 25555050 25555122 72 TTTCTTTCCACACTCTCAAAAGGTGTACTGTGACATTAAAAGAAAAGAAAAAAAATAAAAAAGACTTCAAAA .....x.x..:.:..:::..:.x.x.:...:xx::.:.:x.:....:........x......:....:.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 126945406 63269149 +3657 chr4 + 190214555 152508558 152508557 152508627 70 GTGCACCTGCAGTCCCAGCTACTTAACAGGCTGAGGTAGGAGGATCACCTGAGCCCAGGAGATTGAGGCT chr4 + 94230402 76033204 76033203 76033273 76033204 76033203 76033273 70 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ......x..:...:..........:.x........x:xx.x.:.x...:...:.....:..x..x:.... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 76475354 NA +3008 chr4 + 190214555 152512825 152512824 152512881 57 ACAACTGTGTGAATACAATGAAAACGACCGAATATTTATTTATTTATTTATTTGAGA chr4 + 94230402 16656211 16656210 16656267 16656211 16656210 16656267 57 ACAACTCTGGTAAGAAAATGAAATGGATTGATTATTTATTTATCTATTTATTTGCGA ......x..xx..x.x.......xx..::..x...........:..........x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 135856614 54357941 +3026 chr4 + 190214555 152512840 152512839 152512888 49 CAATGAAAACGACCGAATATTTATTTATTTATTTATTTGAGACGGAGTT chr4 + 94230402 25225338 25225337 25225386 25225338 25225337 25225386 49 CAATGAAAACTCAGCAATCTTTATTTATTTATTTATTTGAAACAGAGTT ..........xxxxx...x.....................:..:..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 127287502 62927053 +3753 chr4 + 190214555 152517917 152517916 152518015 99 ATTTACCAGAA------------TTTAGTTCCACT-TAGGCATTTTTAATCTTTTATAGAACATCATTCAGCACTCAATACTTATTTTTTTCTTTTTTT--CTTCAAGACAAAG chr4 + 94230402 44293576 44293575 44293689 44293576 44293575 44293689 114 ATTTACCAAAGAAATGCATGAACTCTATTTCTATTCTAGGTATTTCTAATCTACTGCATAACATCATTCAGTGCCCAAAAATTAGTTTTATCTTTTTTTTCTTTTAAAGCACAG ........:.:------------.:..x...:.:.-....:....:......x:.::.x............::.:...x.x...x....x.........--:..:..::..x.. 11M12I12M1I63M2I13M 74/99 74.7% 114/94230402 0.0% 15/99 15.2% 108224341 81990214 +3093 chr4 + 190214555 152530057 152530056 152530134 78 AAAAAAAAAAAAATACACACACACACACACACACACACACACACACGTGTATATATATACGTGTACATATATATATAT chr4 + 94230402 74526062 74526061 74526129 74526062 74526061 74526129 68 AAAAACACCAAGATCCACACACACACACATGAACATACACAA----------ATATATACGTATATATGTATTTAGAT .....x.xx..:..x..............::x...:.....x----------..........:..:..:...x..x.. 42M10D26M 53/68 77.9% 68/94230402 0.0% 10/68 14.7% 78003995 NA +3430 chr4 + 190214555 152543591 152543590 152543683 93 TGCGCCTGTAATCCCAGCTACTCGGGAGGCTAAGGTATGAGAATTGCTTGAACCCAGGAGGCAGAGTTTGCAGTGAGCCAAGATGGTGCCAGG chr4 + 94230402 76033205 76033204 76033291 76033205 76033204 76033291 87 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAG ...:.x....:.:.........:.::.....:..x:x..x...x::...........:..x:xx:.x:..:..------..x...:.....:. 73M6D14M 60/87 69.0% 87/94230402 0.0% 6/87 6.9% 76510386 NA +3287 chr4 + 190214555 152544567 152544566 152544632 66 GTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGATGGAGGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:...:.--....:.:.........:.::.......xxxxx.x...x................ 10M2D54M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 76511366 NA +3086 chr4 + 190214555 152545027 152545026 152545099 73 TACACCTGTAGTCCCAGCCACTCAAGAGGCTGAGGTAGGAGGATTACCTGACCCAGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x......:.....:...::.:........x:xx.x.:.x:..:...x..x:.:..x..x:.....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 76511822 NA +3578 chr4 + 190214555 152546752 152546751 152546841 90 CAAAAAAAAAAAAAAAAAAGTAAAAATTGATTTTGTAATCCATTTAAATTGATTTAAATTTTAATCCATTT--TTAATTATCAGTTGACCTT chr4 + 94230402 33383369 33383368 33383459 33383369 33383368 33383459 91 CAAGAAAAAAAAAAAAAAGGTGAAAATTTATTTTGGAATGTTTCCAAACTCTTCTAAATTTAAAACTAACTAACTAAGTA-CAGCTGACTTT ...:..............:..:......x......x...x:x.::...:.xx.:.......x..x.:.x:.--:...x..-...:....:.. 71M2I7M1D11M 66/89 74.2% 91/94230402 0.0% 3/89 3.4% 119163383 71051172 +3277 chr4 + 190214555 152554002 152554001 152554168 167 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAG---AAGGAAAGAAAGAAGAAAAGAAAGAGA--AAGAAAGAAAGCTGGTGGGCTGT----GAACTCAG chr4 + 94230402 33877425 33877424 33877600 33877425 33877424 33877600 176 AAGTAAAAAAAAAAAAAAGGAATAACAATTGAAACTAACAGAAGAAAATGAATTAGGAAATATTGATAACAACATAAATAACAAAAATACCAAGGAAGAAGACAAACAGTGCAAAGGCAGGAGGGAGAAATGGAAAAAATCCAGAAAGGAAATTTAAAGTGTGTTCCAGAACTCAG ...x..:...:...:....:..x..x:.xx....xx..x....::...x::.x:::..:.x.xx..x.:x..x.x.:.x.:x..:.:x.xx..:...:....x.:.x..---..:.:x..:.:.:.....x.:..:.:.--x......:..::.x:x:.xx...----........ 109M3I27M2I23M4I8M 102/167 61.1% 176/94230402 0.0% 9/167 5.4% 118676577 71537978 +3425 chr4 + 190214555 152554031 152554030 152554149 119 AGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGAAAA-------GAAAGAGAAAGAAAGAAAGC chr4 + 94230402 51148379 51148378 51148504 51148379 51148378 51148504 126 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGC ........::..xx.x.:......x......:...:.x....:xxx....xx:..:x.:..x.x:..:::x..:.....:..::::.:..:..:.:.x.-------...:x.x:...:...::... 99M7I20M 74/119 62.2% 126/94230402 0.0% 7/119 5.9% 101405652 88808903 +3412 chr4 + 190214555 152554041 152554040 152554140 100 AGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGAAAAGAAAGAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG ........::..xxxx.....................x.:.::xxx....xx:..:x::..x.x:..::.x::..:.:...:...:...:::..:..x.. 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 101405662 88808893 +3685 chr4 + 190214555 152554045 152554044 152554144 100 AGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGAAAAGAAAGAGAAAGAAAG chr4 + 94230402 51148379 51148378 51148478 51148379 51148378 51148478 100 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAG .......:::x.xx.x...........:.........x.:.::xxx....xx:...x.:..x.x:..:..x:...:.:..:...:....::..::..x.. 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% 101405666 88808889 +3674 chr4 + 190214555 152554049 152554048 152554149 101 AGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGAAAAGAAAGAGAAAGAAAGAAAGC chr4 + 94230402 51148379 51148378 51148479 51148379 51148378 51148479 101 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGC ...:..x:::..xx.x.......:...:.........x....:xxx....xx::..x.:..x.x...::.x:...::....:..:..:..:..::..x... 101M 65/101 64.4% 101/94230402 0.0% 0/101 0.0% 101405670 88808885 +3061 chr4 + 190214555 152555163 152555162 152555251 89 TGCTTTCTTTTACTTCTACCTGTCATTCTATTA--TATTTCTATTTCTTTTCTTTGTCTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTTCT chr4 + 94230402 72001391 72001390 72001481 72001391 72001390 72001481 91 TGCTTTCATACAATTTAAATTCTCAATTAACTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCT .......x.x:.x..:x.x:.x...x.:x.:.:--.:::.::x:....x:..::...:...:.........:...........:.::.... 33M2I56M 58/89 65.2% 91/94230402 0.0% 2/89 2.2% 80553772 NA +3145 chr4 + 190214555 152560790 152560789 152560881 92 CATGGTGGCATGCAGCTGTGCTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATGGTTTGAGCCCAGGAGTTCAAGGCTGCAGGGAGTCATG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::....--....xx...:x.:...........::........x:xx.x.:.xx::....:.....:..:.:x:.....:..::x:.x... 8M2D82M 59/90 65.6% 90/94230402 0.0% 2/90 2.2% 76527593 NA +3479 chr4 + 190214555 152566958 152566957 152567034 77 GTGGTTCGTGCGTAATCCTAGCCACTTGGGAGGCTGAGGAAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.::.:...:.:.:...:.....::........xxxx.x...x.............:..x:xx:..:..:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 76533757 NA +3449 chr4 + 190214555 152576551 152576550 152576619 69 GGCTAATTTTTGTGTATACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250993 33250992 33251061 33250993 33250992 33251061 69 GGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..:.xx.........:.:::.:.......:.:........x.xx....x...x.....x..x....... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 119325558 70888997 +3017 chr4 + 190214555 152576574 152576573 152576612 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 127783948 62430607 +3013 chr4 + 190214555 152577534 152577533 152577599 66 AAAAAAAAAAAAAGAAAAAAGAATTAAAACTGAATACCTTTTTCCTTACATAGGATTTTCACGCAA chr4 + 94230402 71403935 71403934 71404000 71403935 71403934 71404000 66 AAGAAAAAGAAAAAAAAAAAGAAGAAATAATGAAAAGCTTTTTACTTGCTTACAATACTCAGGCAA ..:.....:....:.........xx..x.x....x.x......x...:.x..x:..x:...x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 81173599 NA +3311 chr4 + 190214555 152591000 152590999 152591068 69 TTATCCCACGTTACAGATAAGGAAACTGAGGCACAGAGAAGTTAAGAAACTTGCCCAGGGTCACACAGC chr4 + 94230402 51253953 51253952 51254021 51253953 51253952 51254021 69 TTATCCCATTTTCCAGAAAAGGAAACAAAGGCCTCAAGAGGTGAAGTGACTTACACAGGATCACCCAAC ........:x..x....x........x:....x:x:...:..x...x:....:.x....:....x..:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 101337047 88877508 +3434 chr4 + 190214555 152594842 152594841 152594924 83 CATGGTGGTGTGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::..--......:.:.........::........x:xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 76561645 NA +3752 chr4 + 190214555 152600591 152600590 152600674 84 ATATGGTGGTGTATTCCTGTGGTCCCAGCTACTGGAGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::......:.--.x...:..:.........x..:........x.xx.x.:.x.......:.....:..x.xx:.....:.. 13M2D69M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 76567395 NA +3347 chr4 + 190214555 152600942 152600941 152601015 74 GTGTGCCTGTAGCCCCAGCAACTTGGGAGGCTGAGGCAAGAGAATCACTTGAACCCTGGGGGCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.....::.....x.....::........x.xx.x...x...........x.::.x:xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 76567738 NA +3200 chr4 + 190214555 152617478 152617477 152617596 119 ACAGAGAGACAATTAGAAGTGTATTTATTTAGTATATATATAACACTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTT chr4 + 94230402 23522707 23522706 23522816 23522707 23522706 23522816 110 ACAGTGAAATTGGTTGAGGTGTTCTAAATTGAGATTTATATCACGGCAGTCTCAAAT---------TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCT ....x..:.:x:x.x..:....x:.x.x..::x..x.....x..:x:.xx.x:.x:.---------..x.x..::..........................x:x....::.x.....:. 57M9D53M 73/110 66.4% 110/94230402 0.0% 9/110 8.2% 129094771 61119784 +3155 chr4 + 190214555 152617524 152617523 152617588 65 TATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x.:.x.....x.................:.xx:....x::...:....:..x...:x.x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 66782991 NA +3209 chr4 + 190214555 152617539 152617538 152617627 89 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA---------TATTTTTTTTTTTTTTTTTAATGCAAAGAAAACTGTTGGGCCTCATGT chr4 + 94230402 33250994 33250993 33251089 33250994 33250993 33251089 96 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAAAGAATATTAAT--GCCCCATAT ..x.x.x.x.............:.....:.:........x.---------.:.....x..x.......xx.x.x......x.:.:x.--...:...:. 41M9I37M2D9M 66/87 75.9% 96/94230402 0.0% 11/87 12.6% 119366545 70848010 +3366 chr4 + 190214555 152617541 152617540 152617597 57 GTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTT chr4 + 94230402 33250994 33250993 33251050 33250994 33250993 33251050 57 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTT ..x.x.x.x...................:.:........x.x.....x...x..... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 119366547 70848008 +3063 chr4 + 190214555 152617546 152617545 152617598 53 TGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522816 23522764 23522763 23522816 53 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCT ..x.x..::........:.................x::....::.x.....:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 129094782 61119773 +3086 chr4 + 190214555 152617548 152617547 152617598 51 TGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522814 23522764 23522763 23522814 51 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTT ..x.x..::......:.:..................::....::.x..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 129094784 61119771 +3398 chr4 + 190214555 152624464 152624463 152624543 80 AGTAGTGCACACCAGTAGTCCCAGCTACTTGGGAGGCTGAGGTAATAGAATCACCTGAGCCTGGGAAGTTGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:......::--.....:...........::........x:xxxx...x...:...:..::.:.:x..x:.....:.. 12M2D66M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% 76591264 NA +3650 chr4 + 190214555 152628557 152628556 152628642 86 TGTCACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAACACACACACACACACAA--------AACAGTAATATATTTCTTTCTTTT chr4 + 94230402 49163123 49163122 49163216 49163123 49163122 49163216 94 TATCCCTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAACAAGACTTTATTTCTTTCTTTT .:..x..x:.:...:...............:..x..xxx..x........::.:.:.:x...--------....:x.x.x.............. 62M8I24M 64/86 74.4% 94/94230402 0.0% 8/86 9.3% 103465434 86749121 +3056 chr4 + 190214555 152628570 152628569 152628626 57 AAAAAAAAAAAAAAAAAAAAAAACAAAAAAAACACACACACACACACAAAACAGTAA chr4 + 94230402 5860125 5860124 5860181 5860125 5860124 5860181 57 AAAAGAAAATGTATAAAAAAAGATAGAGAAATCACACACACACACAAAAAAAAGGAA ....:....x:x.x.......:.:.:.:...x..............x....x..x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 146768445 43446110 +3593 chr4 + 190214555 152637405 152637404 152637487 83 CGTGGTGGTGGGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--:..x....:.:...........::........x.xx.x...x::...........:..x:xx:.....:.. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 76604208 NA +8219 chr4 + 190214555 152643048 152643047 152643180 133 AGAGAGGAAAGAAAAAAAACAACTTTAGGTTACCACATACCATTTCTATTCATGCTGTTCATCCATTTATCAAGCTCTTCCATTTCAATTTCCATAACAGAGGGTGTATCTTCCTCAAAAATAGGGCTAGAAA chr4 + 94230402 35002134 35002133 35002262 35002134 35002133 35002262 129 AGAGAGGAATGATGGAGTAGAG----GGGTTACTATGTACCATTTTTGTTCATGCTGTTCATCCACTTATCGAGCTCTTCCATTTCTATCTCCATAACAGAGGGTGTGTCCTCTTCGAAAATAGGGCTTGAAA .........x..x::.:x.x.:----:......:.::........:.:.................:.....:..............x..:.................:..:..:..:...........x.... 22M4D107M 106/129 82.2% 129/94230402 0.0% 4/129 3.1% 117640914 72573641 +3162 chr4 + 190214555 152652375 152652374 152652486 112 TTAAAGAAAGGAATATGCATATATTCACTTCTGGAAAATTTCATTGAAATGTATTATTTATCACTTACTATTATATGTAGTCCTTGTTGCTTAATTTTAAAACATCTCTGCT chr4 + 94230402 73805832 73805831 73805933 73805832 73805831 73805933 102 TTAAAGAATGCAAAATGCTTGTATACAATTCTGAGAAATTTCATACAAATGTATT--------TGTACTGACA-AGGCAGTATTT-CTATTTTGTTTTAATACAATTCTGCT ........x.x..x....x.:...x..x.....::.........xx.........--------:x....:x:.-.x.:...x:..-:.::..x:......x...x:...... 55M8D10M1D11M1D26M 74/102 72.5% 102/94230402 0.0% 10/102 9.8% 78846543 NA +3061 chr4 + 190214555 152652375 152652374 152652486 112 TTAAAGAAAGGAATATGCATATATTCACTTCTGGAAAATTTCATTGAAATGTATTATTTATCACTTACTATTATATGTAGTCCTTGTTGCTTAATTTTAAAACATCTCTGCT chr4 + 94230402 73803536 73803535 73803637 73803536 73803535 73803637 102 TTAAAGAATGCAAAATGCTTGTATACAATTCTGAGAAATTTCATACAAATGTATTTGTACTGACAAGACAGTATTTCTA----------TTTTGTTTTAATACAATTCTGCT ........x.x..x....x.:...x..x.....::.........xx.........xx.xx.x..xx:x:.x...x.x..----------:..x:......x...x:...... 79M10D23M 72/102 70.6% 102/94230402 0.0% 10/102 9.8% 78848839 NA +3427 chr4 + 190214555 152653899 152653898 152653981 83 CGTGGTGGTGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--.:..:.:...........::........x.xx.x...x::...........:.:x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 76620702 NA +3868 chr4 + 190214555 152658673 152658672 152658755 83 CATGGTGGCACACTTCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTCAACCCAGGAGTTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...x.--.................::........x.xx.x.:.x.....x.......:..:.xx:..:..:.. 15M2D66M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 76625476 NA +3096 chr4 + 190214555 152671607 152671606 152671676 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 76638410 NA +3366 chr4 + 190214555 152672130 152672129 152672199 70 AGTGGCATGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATTGCTTGAACCCAGAGGCTT chr4 + 94230402 76033200 76033199 76033267 76033200 76033199 76033267 68 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT .....--...:.x......:.........::::........x:xx.x.:.x::............:.... 5M2D63M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 76638930 NA +4377 chr4 + 190214555 152676436 152676435 152676567 132 TACTTAGATTCACTAATTAGCTGTGTGACCTTGGGCAAGTCACTTAGCCTCTCTGTGCCTCAGTTTTCTCAAATGTAAAAACAGGGATAATAG----TGCCCACCTTATAAGGTTGTTCTGAGAATTAAATGAGTT chr4 + 94230402 83501122 83501121 83501248 83501122 83501121 83501248 127 TACCTGGATTCTGTACCCAG-------ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGT-AAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAG-GCTAAATCAATT ...:.:.....xx..x::..-------..::.......:.:.....:...x.x...............:..xx...-....::.:.x.:....----.:..:....:.:.:..x.:..x....-::.....x.:.. 20M7D49M1D16M4I26M1D12M 89/123 72.4% 127/94230402 0.0% 13/123 10.6% 69175314 NA +3657 chr4 + 190214555 152676456 152676455 152676561 106 CTGTGTGACCTTGGGCAAGTCACTTAGCCTCTCTGTGCCTCAGTTTTCTCAAATGTAAAAACAGGGATAATAGTGCC-CACCTTATAAGGTTGTTCTGAGAATTAAA chr4 + 94230402 33474158 33474157 33474259 33474158 33474157 33474259 102 CTGTATGGCCTCAGGGAAGTCATTTAGCTTCTCTGTACCTCAGTTCTTC----TGT-AAAATGGAGATAAGATTTCCACTCTTCATGATGGCATTATAAGAAAGAAA ....:..:...::..x......:.....:.......:........:.::----...-....::.:.....x.x.x..-.x.:.:..:.x.x::..x.:....xx... 49M4D3M1D20M1I29M 72/101 71.3% 102/94230402 0.0% 6/101 5.9% 119202298 71012257 +4609 chr4 + 190214555 152676459 152676458 152676537 79 TGTGACCTTGGGCAAGTCACTTAGCCTCTCT-GTGCCTCAGTTTTCTCAAATGTAAAAACAGGGATAATAGTGCCCACCT chr4 + 94230402 13242473 13242472 13242551 13242473 13242472 13242551 79 TGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGT-AAAATAGGGATACTACTACTTACCT ....................x..........-:...........:.:..xx...-....:.......x..x.:.::.... 31M1I22M1D25M 66/78 84.6% 79/94230402 0.0% 2/78 2.6% 139433986 50780569 +5204 chr4 + 190214555 152679944 152679943 152680142 199 CTCGGCAGAGGC----------GCGCTCAGGATGCTGCGCCGGGCTGCA-GCCTCTCTG------------AAACGTGAACATTTCCTGTTTCCTGCTTG-------TTTGGGTCGGTGCTGACTTGAAGGAGAGGT---GTGTGCCTGTTTTTTAGGAAGTGATGTAATTCTGCAGGAGCCTGTCAGACCAGCAAGGATTGCAAAAG-----AGAAGTTGCT------GTTGAAGCACTGGT chr4 + 94230402 35009877 35009876 35010116 35009877 35009876 35010116 240 CTGAGCAGAGGCACCCAGCCGGGCGCCCAC-ATGCTGCCTCAGCCTGCGCGGCTCTCTGCGGGCTTCGGCAGAGCATTTACATTTCCTGTTTCCTGCCCCCGGTGCCTCCGAGTTG-TGCTTCTTTGGGAGATGGGCTCCGTTTGATTGTTTTT-AGGAAGTGATGTAATGCCGTCCGGGCCTGTCAAGCAGGCAGGGATTGCAAAAGCGAGAGGAGGCTGCTCCTCCAGCTGAGGCACCTGT ..x:........----------....:..x-.......x:.:.x....:-.x.......------------:.:.:.xx..................::x-------.::.:..:.-....xx:...:::..x:..:---..x..x:.......-...............x.:.:xx.:........::.x:...:............-----:..:.:....------.:...:....:x.. 12M10I8M1D18M1I9M12I29M7I9M1D20M3I14M1D53M5I10M6I14M 144/196 73.5% 240/94230402 0.0% 47/196 24.0% 117670067 72544488 +6317 chr4 + 190214555 152681118 152681117 152681421 304 TCTGGTTGGTGCAAACGTATGAGGTGACTGGAATTCCTTAGCCCCTGACATAGCTGTTAATTTTTCTTTAATGCATTGCTGCTTTTCAATGTCATTAGTCACTGTTTAT---CTCAGTTATTATTCACAAGAAATAGGTTGGTGATTCATGTAAGGATCAGTTTGTTAATGGATTTACAGTATGCACTTTAATGTTTTA---AACTGGCAATTAA--------GTCAATTCTTGATAAAATATGCTTTTTGCACCACAGGTGACAA-------------------TACAGAAC--AAACAGCAGGAGAAAATAGACGTGCT----CAAAACTGGGTGATTGAT chr4 + 94230402 35010848 35010847 35011177 35010848 35010847 35011177 330 TCAGGCTGGTAAAAGAGGCTGAAGTGACT--AATTGCTGCTCCGGTTCTGCAGCTAATAACTTTCCTT-AACACATTGATGCTTTTATAGGTCATCAGTCACGGTTTCTTAGCTCAAGTAGCA-----AAGAAATAGGTCAGTGATTCATTTAATGGCCAGCTTGTTAATAGATTTAAA----ACGCTTCAGTGACTGAGCTAACTAACAATTGGAAGTGGTCGTGTATTATTGGCAGCGTAC-CTTTGTGCACTGCTTAAGACAGAGAGGGAAAAAAGCAAAGCTACAGCACTGCAGCTGCAAGAAGATAAAGAGGAGCTCTGACAACACCAAGTGGCTGAT ..x..:....:x..:x.xx...:......--....x..xxx..xx.xx:::....:x...:...:...-..::.....x.......xx.x.....:......x....x.---....:x..x:.-----...........::.........x...x.::...:........:......x.----:.:...:.:..x:.x.---....::.....::--------..xx...x...::.:x:..:-....x.....::.xx:x....:-------------------.....x..--x.:.x...:..::.x.x...x.x...----...x..:::...::.... 29M2D37M1D40M3I11M5D51M4D16M3I13M8I20M1D22M19I8M2I26M4I18M 200/291 68.7% 330/94230402 0.0% 52/291 17.9% 117670270 72544285 +3355 chr4 + 190214555 152685238 152685237 152685335 98 ATAAAAAAATTAGCCGTGCATGGTGGCACCTACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGGATCACTGGAGCCTGGGAGTTCAAGGCTG chr4 + 94230402 76033183 76033182 76033274 76033183 76033182 76033274 92 ATGAAAGGATGA----TACACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..:...::..x.----.:..::....::.--..x......:.........::.:........x.xx.x.:.x....x..:..::.:..:.:x:..... 12M4D13M2D67M 63/92 68.5% 92/94230402 0.0% 6/92 6.5% 76652055 NA +3133 chr4 + 190214555 152702360 152702359 152702460 101 GACATGAAGGTGTGTGCCTTTAGTCCCAGCTACTTGAGAGGCTGAGGAAAGAGGATCACTCAACCCCGGAAGACAGAGGTTGCAGTGACCTGAGATCGAGC chr4 + 94230402 76033193 76033192 76033292 76033193 76033192 76033292 100 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGC ..:.::x..xx...::.x.x....:............:........xxxx.x.:.x....::.x...:....x:xx:..:..:..-:..x...x::.:... 85M1D15M 64/100 64.0% 100/94230402 0.0% 1/100 1.0% 76669167 NA +3141 chr4 + 190214555 152707333 152707332 152707403 71 CGTAGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGTGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .::.....:.x::.--....:.:...........::........x.xx.x...x..........::.:x.. 14M2D55M 50/69 72.5% 69/94230402 0.0% 2/69 2.9% 76674136 NA +3087 chr4 + 190214555 152707454 152707453 152707503 50 AAGAGCAAAGCTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGCAAAGACCT chr4 + 94230402 39858768 39858767 39858817 39858768 39858767 39858817 50 AATGGGAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAATCT ..x:.x............x..............x..x...:....:.:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 112848686 77365869 +3179 chr4 + 190214555 152709163 152709162 152709245 83 CATGGTGGTGTACACCTGTGGTCCCAGCTACTCAAGAGGCTGAAGTGGGAGGATTGCTTGAGCCCAGGAGGTCGAGGCCACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x...:..:.........::.:.......:x:xx.x.:.x::.....:.....:..x.:x:...:::.. 10M2D71M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 76675966 NA +3182 chr4 + 190214555 152716345 152716344 152716416 72 GTGCCTGTAATCTCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTAAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.::...........:........x.xx.x...x.....:....::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 76683139 NA +3491 chr4 + 190214555 152718353 152718352 152718435 83 CATGGTGGCACATGACTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......:...........::........x.xx.x...xx:.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 76685156 NA +3747 chr4 + 190214555 152723908 152723907 152723993 86 CACAGTGGTGATGTGCACCTGTGGTACCAGCTACTTAGGAGGCTGAGGTGGGAGAATTGCTTGAGTCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........-----...x...:..x..........:::........x:xx.x...x::.....::....:..x..x:.....:.. 10M5D71M 60/81 74.1% 81/94230402 0.0% 5/81 6.2% 76690711 NA +3045 chr4 + 190214555 152729690 152729689 152729756 67 AGGAGGGCAGGGCATTCTTGGCAGAGAAAGATGCAGTGTTGTGAAAGGGCATGGCGTGTTGGGATGT chr4 + 94230402 93350163 93350162 93350218 93350163 93350162 93350218 56 AGGAAGGCAG-----------CAGAAAAAAATACAGTGCTGTAAGAGGAGATGGCGTGTTGGGGAGT ....:.....-----------....:...:..:.....:...:.:...:x.............:x.. 10M11D46M 45/56 80.4% 56/94230402 0.0% 11/56 19.6% 59379527 NA +3435 chr4 + 190214555 152735218 152735217 152735289 72 GCATCTGTAATTTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x....:..:..........::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 76702012 NA +3985 chr4 + 190214555 152736219 152736218 152736302 84 ATGCAGTGATGCACATCTGTAGTACCAGCTACTCGAGAGGCTGAGCTGGGAGGATCACTTGAGTTCAGGAGGTTGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.....:.--.....x.........:..:.........:xx.x.:.x.......:::...:..x..x:..:..:.. 16M2D66M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 76703023 NA +3118 chr4 + 190214555 152741309 152741308 152741357 49 CTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAATTGAATAACTTT chr4 + 94230402 59351556 59351555 59351604 59351556 59351555 59351604 49 CTGTTTGGAAGAAGGAAAAAAAAAAAAAGAAAAGCAAATGAACACCTTT ....:.::..:..::.............:........x....:.x.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 93389753 NA +3116 chr4 + 190214555 152753995 152753994 152754080 86 CATGGTGGCACACACCTGTAGCCCCAGCTACTTGAGAAGCTAAGGTGGGAGGATGGCTTGAGCCCAGGAGGCAGAGGTTGCAGAGC chr4 + 94230402 76033197 76033196 76033280 76033197 76033196 76033280 84 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC ..::....::...:--.....::............:.:...:..x:xx.x.:.xx:.....:.....:..x:xx:..:..:...:. 14M2D70M 55/84 65.5% 84/94230402 0.0% 2/84 2.4% 76720798 NA +3590 chr4 + 190214555 152760199 152760198 152760280 82 GTGGTGGCACACACCTGTAGTCTTAGCTACTTGGGAGGCTGAGGCAGGAGAAATGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:::.........::........x.xx.x...:::...........:..x.xx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 76726998 NA +3041 chr4 + 190214555 152760344 152760343 152760410 67 AATAAATAAATACACACACACACACACACACACACACACACACACACACACACGTTATTTAGACATT chr4 + 94230402 67290029 67290028 67290095 67290029 67290028 67290095 67 AATAAGTAACTATAAACATCCAAACAAACACAAACACACACACACAAAAAAACATTAGAGAGAGATT .....:...x..:.x...:x..x...x.....x.............x.x.x..:...xxx...x... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 85470315 NA +3146 chr4 + 190214555 152760771 152760770 152760853 83 CATGGTGGCGAGCGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTAAACCCGGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x:..--....:.x...........::........x.xx.x...x::...:.....:.:..x:xx:..:...:. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 76727574 NA +3090 chr4 + 190214555 152782221 152782220 152782286 66 GGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCCCAAACTGTAAATTGTTTGCTTT chr4 + 94230402 6673997 6673996 6674062 6673997 6673996 6674062 66 GAGGTTTTTGTGTGGGTGTAGTTGTTTTTGCATGTGTGTCTTCCCAAGCTGTGAGTCCTTTCCTCT .:...x.x......x....:xx...x.x..::.......:.......:....:.:.:x...x..:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 146108224 44106331 +3044 chr4 + 190214555 152784347 152784346 152784405 59 AAAGTATTTATTTTCTTTTTCTTTTTCCTTTATTCCTATTCTCCTCTTTCTCCCATCTC chr4 + 94230402 54488785 54488784 54488843 54488785 54488784 54488843 59 AAAGTCTTTATTTTTTTTTTACATTTTTTCTATTTCTATTCCCCCCCCCCCCCCTTTTC .....x........:.....x:x...::.:....:......:..:.:::.:...x.:.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 98295562 91918993 +3104 chr4 + 190214555 152789059 152789058 152789149 91 ACATCATATCAAGAATACAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTA chr4 + 94230402 58776828 58776827 58776907 58776828 58776827 58776907 80 ACAACATATTCAAGATATATACTTTTTTCTTTTTTTTTTTTTTTGCTTCTGA--CAG---------CTCTTGTCCAGACAGGAAGGTAACA ...x.....:x.::...:.x........:...............x:..:...--:..---------..x...:....:.x...:x.:.::. 52M2D3M9D25M 59/80 73.8% 80/94230402 0.0% 11/80 13.8% 94012231 NA +4127 chr4 + 190214555 152804241 152804240 152804360 120 AATATATAATATAACATGTATTATATATTATATATATAACATAACATGTATTATATATATTATATATATATAACATAACATGTATTATATATATTTTATATATATAATATAACATGTATT chr4 + 94230402 91155567 91155566 91155681 91155567 91155566 91155681 115 AATAAAGCACAAGACATGTAACATATATAGTACATGTAACATACCATATATAACATAAATCACAAAT-----ACATATCATGTATTTTACTTATATAACATACATGAAAACACAAATATT ....x.xx.:.x:.......x:......x:..:..:.......x...:...x.:...x..:.:.x..-----.....x........x..:x...x.x.:...:..:.x.xx...x:.... 67M5D48M 81/115 70.4% 115/94230402 0.0% 5/115 4.3% 61648674 NA +3006 chr4 + 190214555 152808262 152808261 152808317 56 GAGCCACCACGCCTGGCCTCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 90565611 90565610 90565666 90565611 90565610 90565666 56 GAATAACCAAGACTAGCTTCCATTTATTTTTCCTTTTTTTTTTTTTCCTCTCTCTT ..::x....x.x..:..:.......x.....::.............::.:.:.:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 62242651 NA +3028 chr4 + 190214555 152811081 152811080 152811134 54 AGGTTAAGCCTTTTTTTTTTTTTTTTTTTTTTCAGTTTGGAAAACTGGTTGTTA chr4 + 94230402 22741139 22741138 22741192 22741139 22741138 22741192 54 AGAGTGAGTTTTTTCCTTTTTTTTTTTTTTTTCAGTTTCGAAAGGAAGTTGCTA ..:x.:..::....::......................x....:xx:....:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 130069942 60144613 +3712 chr4 + 190214555 152823647 152823646 152823719 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGCTCCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x...x.............:..x:xx:....x:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 76790442 NA +7591 chr4 + 190214555 152829607 152829606 152829877 271 TTTCTTCTTTTGTTTTAGGAGTCTACCATGGCTCAAGAATCTCCCAAAAATTCAGCAGCAGAAATTCCAGTGACTAGTAATGGAGAAGTTGATGACTCTCGTGAACATAGCTTTAATAGGGTAAGAACACTTTTCTTTCTCTTAATG-----CAAAGAATCATGGTAAGTCTTTAAATGTTGAGAT--GAAAGTAATAGACAAAAT--TTAATATAGGATTGTTTTCTTAGATTGGCTTCAGTC----AGGAATCTAATGTTA---TTAT--ATAGGGATGACAAGGAA chr4 + 94230402 35028526 35028525 35028799 35028526 35028525 35028799 274 TTTCTTCTGGTACAACAGGAAGGTGCAATGGCTCAAGAGTCTCCCAAAAATTCAGCAGCTGAAATTCCTGTGACAAGCAATGGACAGCTGGAAGATTCTCATGAGCACAGCTTTAATAGGGTAAGAGC--------TTTCCTTAGTGTCTAACAAGGTACTGTTATCGG-----AAATGCTGAATTTAGAATGCAGTGCATAGCATACTTCACCTGACATAGTTTTCTCAAGTT--TTTTGGTCTTTTAGGTTATTAATGTTAACCTTGTTGGCAAGAATAATAAAGAA ........xx.::xx:....:xx.:.x...........:....................x........x.....x..:......x.:x.x..x..:....:...:..:..................:.--------..::....:..-----...:.x.:::.x:.x:.-----.....:...:x.--...x.:.:.:x.:.:x..--..x.:x.::x..x.......:.::..--:..::...----...xxx:........---..:.--::.:.:..:.:..:... 128M8D11M5I17M5D12M2I18M2I26M2D8M4I15M3I4M2I17M 181/256 70.7% 274/94230402 0.0% 33/256 12.9% 117801081 72413474 +9600 chr4 + 190214555 152863565 152863564 152863721 157 TTTTTTTACAA-AGTTTTTTCTTTTATTTAAATCTTGCTAAGGATTTGAAGCATTCATTACCATCTGGACTTGGTCTCTCAGAAACCCAAATTACATCTCATGGCTTTGACAATACCAAAGAGGGTGTTATTGAAGCAGGAGCATTTCAAGGTAAGAG chr4 + 94230402 35037025 35037024 35037182 35037025 35037024 35037182 158 TTTTTTAACATTAGTTTTCCTTTCTATTCAAATATTTCTTAGGATTTGAAACGTTCATTACCAGCTGGACTTGGGCTCTCTGAAACCAAAATAACGTCTCATGACTTTGACAGCACCAAAGAGGGAGTTGTTGAGGCAGGAACATTTCCAGGGAAAGG ......x...x-......:::..:....:....x..x..x..........:.:..........x..........x.....x......x....x..:.......:........::...........x...:....:......:......x...x..::. 11M1I146M 128/157 81.5% 158/94230402 0.0% 1/157 0.6% 117826540 72388015 +9055 chr4 + 190214555 152870709 152870708 152870963 255 GAGGAGGAAAAGGATTTTCACAGTTAAA-ATGTCTACCTTTTCAGGTTCCCCAGCACCGCCACTGCCATCTGTTATGTCTCCTAGCAGGGTTGCAGCTAGTCGACTGGCTCAGCAAGGAAGTGATTTAATTGTTCCTGCAGGTATTCACTGCACTGATTGGATAAAGCACTTATTGCTACTGCTGAAGCTACACTAATTTACTCAGTTTCATAATCACTTGCTTTAT-----------------ATTCTTAGGTGTGT---GTGATTCTGACTTTT chr4 + 94230402 35039808 35039807 35040078 35039808 35039807 35040078 271 GGGAAGGTGGTGGATTTTCATGGTTAAATGTGTCC-CCTTTCCAGGTTCCTCAGCATCACCCAAATCAACTGTTATATCTGCCAGCAGCGCAGCAGCTAGCAGACTGGCTGGACAAGGTTGTGATTTAATTATTCCCACAGGTA-TCACAGCACTGAACGGATAACGCCC---TTGTCTCTGCTGACACTGTACTAACTCCTCCATCTCTTCGGTCGTTTGATTTACTGTTACTTGGAAGCATAATTTCTAGGGGCTTTTGGTGATCCTGGTTTCT .:.:...x::x.........::......-:....:-.....:........:.....:.:..xxx::..x.......:...x.:.....x.:x........:x........x::.....xx...........:....::......-....x.......x:......x..x.---...::x.......x:..::.....:.:x::..x:.::x:::..::...x....:-----------------...::....x.:x.---.....:...::..:. 28M1I6M1D108M1D25M3D54M17I14M3I15M 176/250 70.4% 271/94230402 0.0% 26/250 10.4% 117830901 72383654 +6019 chr4 + 190214555 152872460 152872459 152872651 192 AGAACACAGACAAAAAGTGGACCAGTTATTCTAGCAGATGAAATTAAAAATCCTGCAATGGAAAAGTTAGAACTTGTTAGAAAATGGAGTCTAAACACCTATAAGGTTTGTAATTATTTAATGTTTCCACCCTAAATGGCTCTAAAAAAGTTCATTTATATGTTTATTCAAGTCATTATGTTGCAATTAAAT chr4 + 94230402 35041458 35041457 35041618 35041458 35041457 35041618 161 AGAGCTCAGCAGAAGAGTGGACCGGTTGTGTTAG---ATGAAGTAAAGAATCCAGCAATGGAAAAGTTGGAATTGGTGAGAAAGTGGAGCCTAAATACTTACAAGGTATG--------------------------TGGACTTAAATTTGT--GTGTAGATATATATTCTAGAAATTAGTTTGCAACTAAAT ...:.x...xx:..:........:...:.x:...---.....:.x..:.....x..............:...:.x..x.....:.....:.....:..:..:.....x..--------------------------...x::....xxx..--:.x..x..:.x.....x..xx....xx......:..... 34M3D73M26D15M2D39M 120/161 74.5% 161/94230402 0.0% 31/161 19.3% 117831002 72383553 +3047 chr4 + 190214555 152875375 152875374 152875431 57 TTATAAAAAAAAAAAAAAAAAAAAAAAGAATAATCTCTCAGTTTCAGCATTCAGAGC chr4 + 94230402 57533861 57533860 57533917 57533861 57533860 57533917 57 TTTTAAGAAAAAAAAAAAAAAAAAAAGTATTACATTCACAATCTCAGCTTTTAGAGC ..x...:...................:x.x..xx:..x..:.:.....x..:..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 95341514 NA +17896 chr4 + 190214555 152880745 152880744 152881198 454 TTTGCTAGATATGTCTTAAAACTTCCTTTGATTAGTAATAATTATTAGACACATCTGGTGAATTTACTTTCTGAGTCCTGATCAAGT------AAGGGAGCTGACAATTTTC---AGTTTGTTACGCTAGCTTGT----------------------------------------------TTGAATCCAAAAAATGGTGTATGCCATATGCTCTAGCATTTATATTTTGTTTTGTTTTTTCTTTCTAAACAAAATGCATCTTCCACTTTTAGTGTACTCGACAGATTATCTCTGAGAAGCTAGGCCGTGGCTCAAGAACTGTGGACCTTGAACTTGAAGCTCAGATTGATATATTAAGGGATAACAAGAAAAAATATGAAAATATTTTAAAACTGGCTCAAACATTGTCGACCCAGCTTTTCCAGATGGTACATACCCAAAGGCAACTTGGAGATGCATTTGCTGACCTGAGTTTGAAGTCACTAGAACTTCATGTAAGATTATTCTA chr4 + 94230402 35046152 35046151 35046628 35046152 35046151 35046628 477 TTTGCTAA------CTTGAATATTCAT---ATTAGTAGGAGTTG--AGACTTGTCCA---ACTGTTCTTGCTGAGTCCTGATGAACTTCTAAAGAGTGTGTTGGTTTTTTTCTTCAGTTTGTTGTGCAAACTTATATTGGGAGGGGTGATTGTGAAAGAATTGTGTGTAATTAACTGTCCCTTGAAGCTGAAAATGGGTGTATGCTGTGATGTCTTGGATATAT-----------TTGATTCTTTATAATTTAAAT---TTTT----TTCCAGTGTACACGTCAGATCATCTCTGAAAAACTGGGTCGTGGCTCAAGAACAGTAGATCTGGAATTGGAAGCTCAAATAGATATATTGAGAGATAACAAAAAAAAGTATGAAAATATCTTGAAACTGGCACAGACTCTGTCTACACAGCTCTTCCAGATGGTACATACCCAAAGGCAACTTGGAGATGCTTTTGCTGACCTGAGTTTGAAATCATTGGAACTTCATGTAAGACTTTTATA .......:------...:..xx...x.---.......:x.:..:--....x::..::---.x.x.x...x............x..x.------:..x.x.:..::xx.....---........::..x.:...:.----------------------------------------------.....x.::....xx.........::.:xxx...x.x..x...-----------..xx......x...x:x....---.:..----..::.......x..x.....:........:..:..:..:..............x..:..:..x...:.x........:..x........:..:........:.....:...........:..:........x..:..x:....x..x.....:......................................x....................:...:.:...............:.x..x.. 8M6D13M3D14M2D11M3D27M6I19M3I20M46I43M11D21M3D4M4D242M 331/422 78.4% 477/94230402 0.0% 87/422 20.6% 117834593 72379962 +12963 chr4 + 190214555 152882711 152882710 152882883 173 TCTTTGTTT-TAGGAAGAATTTGGCTATAATGCCGATACCCAGAAACTGCTGGCTAAAAATGGAGAGACTCTTCTTGGGGCCATTAATTTTTTCATTGCTAGTGTGAACACTTTGGTGAATAAAACCATTGAAGATACATTAATGACTGTGAAACAGTATGAAAGTGCCAGGTA chr4 + 94230402 35049973 35049972 35050146 35049973 35049972 35050146 174 TCTCTGTTTATAGGAGGAGTTTGGCTACAATGCAGATACGCAGAAACTTCTAGCTAAAAATGGAGAGACTCTTCTCGGGGCTATTAACTTTTTTATTGCCAGTGTGAATACATTGGTGAATAAAACAATTGAGGATACATTATTGACTGTGAAACAATATGAAAGTGCCAGGTA ...:.....-.....:..:........:.....x.....x........x..:.......................:.....:.....:.....:.....:........:..x..............x.....:.........x.............:................. 9M1I164M 154/173 89.0% 174/94230402 0.0% 1/173 0.6% 117832738 72381817 +13265 chr4 + 190214555 152888123 152888122 152888351 229 TTCTTTCCAGGATTGAATATGATGCATATCGCACTGATTTGGAAGAACTGAATCTTGGACCACGTGACGCAAACACTCTGCCAAAGATTGAGCAGTCACAGCATCTCTTCCAAGCACATAAGGAAAAATATGATAAAATGCGCAATGATGTTTCTGTCAAATTGAAATTTCTAGAAGAAAATAAGGTAAATTCTTTACCTTCTAAGGT--CTTTCTGTGGACTTTGAAGTC chr4 + 94230402 35053410 35053409 35053635 35053410 35053409 35053635 226 TTCTTCTCAGGATTGAATATGATGCTTATCGAACAGACCTGGAAGAGCTGAATCTTGGTCCTCGTGATGCAAGCACTCTACCAAAGATTGAGCAATCACAACAGATGTTTCAAGTGCATAAAGAGAAATATGACAAAATGCGTAACGACGTATCTATCAAATTGAAATTTCTGGAAGAAAATAAGGTAAGGTA--CAACTTCTGCTGTTACTTTTTGT---CCTGGAAGTC .....::..................x.....x..x..::.......:...........x..x.....:....:......:..............:.....:..xx.x..:....::.....:..:........:........:..:..:..x...:................:................:x.x--:.x.....:xx..--....:...---.:.x...... 193M2D13M2I8M3D10M 183/224 81.7% 226/94230402 0.0% 7/224 3.1% 117834713 72379842 +3673 chr4 + 190214555 152889821 152889820 152889910 90 TATATATACTATATACTATATATATACTATATATACTATATATACTATATATATACTAATATATAGTGTATGTATACTATATATATACTA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATA--CTATATACAATATATTTATTATGTATCTAATAGTATAT----TTTTAGTATTGTATATGTAATA .:.........:...:........--.......:.x.....x..:...:...x..x..:.....----.x.xx:..:.:.....:..x.. 24M2D38M4D22M 65/84 77.4% 84/94230402 0.0% 6/84 7.1% 126569560 63644995 +3052 chr4 + 190214555 152904147 152904146 152904204 58 CAACCCATCACCTATATATATATGTGTGTGTGTGTATATATATATATATATATTTTTT chr4 + 94230402 30010056 30010055 30010113 30010056 30010055 30010113 58 CATCCAGTCCATTATATACATCTGTGTATGTGCGTATATATACATAAATCTATTTCTT ..x..x:..xx:......:..x.....:....:.........:...x..x.....:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 122894091 67320464 +3148 chr4 + 190214555 152905515 152905514 152905578 64 TTAGGTTATTCTTACTGAATTGTAAGAATTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 + 94230402 62929063 62929062 62929126 62929063 62929062 62929126 64 TTACGTTATTCTTGGGGTATTTTAAAAACTGTTTTTTTTTTTTTTTTTGTCCCTGATGGATGGA ...x.........:xx.x...x...:..:...................x.:::.xxx:...... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 89976452 NA +38437 chr4 + 190214555 152910008 152910007 152911906 1899 CTATTTTATTGTTATTG----------------GTGTTAATGCTTGGTCTT---GTAACTCTGCCCT-GTCCACAGGTTAAAGTATTGCACAATCAGCTGGTCCTTTTCCACAATGCCATTGCCGCTTACTTTGCTGGGAATCAGAAGCAGCTTGAACAGACACTTAAACAGTTCCATATCAAATTGAAAACCCCTGGAGTGGATGCCCCATCTTGGCTTGAAGAACAGTAAAATCACAGCGGAAAATAAAAAGAAAGTCGCGTTGTTATATTTCTAAACCAACCTAACAAGAATTAAGCAGAGTTGGGGGAAGTGGGAGGGGTGACAAGCATTATAGTGATTCTTGCACAAACAGCTTTAATTTTT----CCCTTTTTCATACTTTAACAATTGAACTGTTAA------GGGTGGTTTTAATG----TAAACATAGTTTCTATAATCT-GAACACAATAATTTTCCTTTTTGAGAAATCCTTTTGTATTGTGAGGGTTGATGGCTATTTCTGTAGTT------------------------TGAAAACATCTAATAGAGATTTGCACTGACAAGATAAAAATTCAAGGTTTTTGGTCCTGGAAATGAGGGCCGATTGTAACTTTTCCAAAGGGAGGTTTACATGATTTGTATCAACATCAGATATTTTATATGTGAATATATTAAACATCTTTAAGAGATTCATTTTCATGTA----TTAAAGAAAAAAG-------AAACTATTTTGCAGAGTAAAGTTATATGGTGTTCCTGCAGCGTCCACACA-GAGGCAGCAGCTCTAATGAATGA--TTAGCTTGTGGAGTTGTGGCAAATACCTTTTTAAAA-ATGAATCTGTACCACTGTAATTTTATTTAGACTTTTTTTTAAAGACACAGAAATCA----CACTGTCATTTCTGTGAGGCTTTTAAGCTTATGAATTTGCTTCACCCGAAGTCATTGGACAGTTACATTTGCAATTTCTTTTGGTTCATAACAAAACCTGCTTAAGAGAATTTTTTTTTTTGACAGGTGGACGTGGGAATGGAAATTCTTAATGGTTTCTGGAGTAGAAATCTGTACTTAGAAAACTAGTTTTTGGGTCAGTTCCATTTTGATAGAAGTGAATACATAGACAGCTTTTATTGACTTCCATATGTAACAATACCGTTTAAGCCTTAAATCACAGATATGTGCCTTCTCAGATACAGTAATTCTTGTTCAACCAATGTACAAAATCCATAAAGAAACCCCTGTTGGATAATGTTTGATGTGTCTATTCCTTCCATGGAATGGAGCACTATGTATGAATGTTGGGTTTCTTTGTACTTGTTAAGCCACATTTGAGGTTTATGGTAAAAATCATCTTTTGAGTTTGCTCTTTGGTTTTTCTTCATTCCTTTTGAGGATTGGGAAAACAGAAAGATTCTTTGATTTGGGTAATGAAGAGGTAATTTGGGACAGTGTGGTGGTACCAGGAAGAAAGAGGATTGGAAAGGCCAGTACTGTTTTAGTTGCTCGGCACTGTTGGTTTTGTTTTAATGTGGTTGCCCTGTCCACTACATGGTTCTATCAGTAGTGTAATCCAT-TTTCAATGTAAAGCTCTTTTAGTTTTTGTCATAGACA---TAAATTAATATTTTGAGAGGCATCCCT--CACCTGTTCATTTCTTCTGTGTT----------GAAATGAAGTACTTAAAATTACCGTTATACATGAACTTTGTGGACTGTAAGATT--TGTTATATATGTTCAAATGCCTTTTAGCTGGC-TTTTTAATTAATATGCCTGTTTTGAGTGCTTAATACAA-TGTAATGTGATTGTAAATCATACCTATTTTAAATCATTCCTTCCTGTATATTTGTACT--CAGAGAGCCTTATTTTATTCTTCCAGCAGAATTACTACTTGTGATAGTTCATTTACATTCCCCAGAATGTGCCTCTAGTGTGAATTTTGTATTCTTATTAAACGTGTTTGCTGC chr4 + 94230402 35060798 35060797 35062466 35060798 35060797 35062466 1669 CTATTTTGTTGTAATGGACATATGACATACGGTGTCTGAATG-TTATTCTTAACGAATCTCTGCCCTTGCCTGCAGGTGAAGGTCTTGCACAATCAGCTTGTCCTGTTCCACAATGCTATTGCAGCGTACTTCGCTGGGAATCAAAAGCAGCTTGAACAGACACTTCAACAGTTTCACATCAAATTGAAAACTCCTGGAGCAGATGCTCCATCCTGGCTTGAAGAACAGT--AATCAAAGAAGAGGACCCAATGTTAACC------TAAAATCTATA----AATCTAATAAGAATTA---AGGGTTGGG----GTTGGAGGACTG-------TTACAGTGATTCTTGCACAGAGAGCTTTAATTTTTTTTCCCTTTTTTGACACTGTAAAACTGAATTTGTTGAGAAAATGGGTAACTTTAAGGTAACTAAGCATAATTTCTATCATTTCAAATACA---------------GACCACTCCTTTTGTA-TGTGAAGGCTGGTGGTTACTTCTGTAGCTGGGATGGGGGGGAGAGGGAGGGTGGGGAAAAAATAACTATAGATTTGCACTGACAAATT--ATGTTTGTGATTTCTGGTCATTT---TGGTGGCTAGTCAAAATATTTCCAAATGGAGATTTACGTGATTTATACCAACATCTGGTATTTTGTAGACAAATATAGAAAACATCTTTAA-----TAATTTTCATATGGCTTTTAAAAAGGAGAGAGTTAAAAGAATATTTTGCAAATTAATAATATGAGGCTTGTATGCAGTACATGCGTATAAGGCAGCAG---TAGCGGTTGGCTCTGACTAGTGGAATTGCAGCAGATGCCTTTTTAAAAGATGTACCTTT-CCACTGTAGGCTTTAAAAAAC------AAAAGAACACTAAAGCAAGAATCACTGTCAGTC---TGAGGCTTCTAAGCACACAACTTTGCTTTGCACCAAGCGGTTTG-------------------------------------------CTGAGTGAA-----------GCCAACCATACG-----ATG--------TACTAATTTC----------------ATTTAAAATTTTACTTTATGGG----------------AAAAGAAAAAACA----------------------------------ACCATACTAGCCTTAAATCACAGGTATGTGCCTTTTT--ATAAGATAATATT--TTCAACCAGTGTACATAATCCA-----AAAACCCTTTCACGTAACGGTT----TGTCAGTTCCCATCGTGGGAAAGGAGAC--TGTATAAATGCT--GTTTGTTTGTACACTTAGAGCAA---------------GTAAAAG------------------CTTTCGTTGACCTTCAT---------GGACCGATACA---------------GTTTTGAGTGAGGAAA-------TTGGGCCAGTATGATTTTTCTGTTTA--------ATTGAAAAG---CATACT-----------TCAGTAATGAGAG--------CAATGTGGAGGATACTTCTTTTTAATTTCTCCGTCTGTAGTGTAGTCCTTCTTCCAATGTAAAATTCTGTCAG-TTTTATCATATCCATTTTAAATTCAGTTTATTGGAGTCCTCATTTGCACATGTTACATTGCTTTGTGTTCTATGAAGTAAAATTGAAATACTTCAGAT--ATGTTATTTAC-AACTGTGTGGATTGTATGATTTATGTACTGTACGTTCAAATGCCTTTCAGCTGACATTCTTAA----------AGTTTTCAGTGCTTAACAGAATTGTAATGTAACTGTAAATCAAAC---TTTTTAATCATTCCTCATTAAATTCTTGGCCTGACAGTCTTCTTTATGTTTTGATTCTGTCAGAAT---CTCTTGTAATAGTTTATTTACATTCCCCAGAATGTATATCCTATGTGAATTTTGTATTCATATTAAAGATGTTTGCAGC .......:....x..x.----------------..x.x....-..:x....---.x.x.........-.:.::.....x..:..x..............x.....x...........:.....x..x.....:...........:.....................x.......:..:..............:.......::.....:.....:................--.....x..x:..::.:xx..x.xx.::.------.x.x..:.x..----..:....:........---..:......----..x.....:x..-------...:...............:.x.............----..:.....x.:...x...x.x.x:.x:....:.------....:::.....x.----...:....:.......x..:.-:..:...---------------..xx.x..........-.....:..:..:...:..:........:.------------------------x.:...x.x:x.x..x................:x.--.x:..::x.:...:.....x.xx---..:x...:::.::x..:x........x....:.....:......:..:.......x.:......:..x:::......xx............-----.x........:.:----.....:.::.:..-------.:.x.........:.x...x:x...:x..:x.x:x.....:::x::.::.-:.........---..::.:x..:--:.::..x.....:...::...:..:...........-...x.:..x.-........:x:..xxxx.:..------xx..::....x:..::x.----........x.:---........:.....x:.::.x.......::.x.x...:x:..x.-------------------------------------------:.:..x...-----------.x..:x::x...-----...--------..x.::....----------------.:...:..xx:..x...x....----------------.:...x:..x...----------------------------------...:.x:x...............:..........:.:--...x::....x:.--........:......x......-----...x....x.::x:...:.x..----....x:....:x:.:...:.x:.::x..--.....:....:.--....x.......x:x.x:...x.---------------......:------------------....x...xx:......---------...::.:x.x.---------------.x....:..:.x...:-------.....x....:..:.xx.x.::xxx.--------....:....---x:....-----------..:.:.x..xx:.--------:.......xx.x:x:x..:x:.xx..xx:..::..x........:...x.-..:.........::...x.:..-....:.....xx..---......x.xx..x.x:...x.x..x:.--...x....xxx..x:.:......----------:..x....:.....x.:..--x:.....x:.:-....x......:....x....--...xx.:..:..............:.....:.-..:....----------x.....x.........:.x..-........:.:.........x..---....x..........:x:.:x..x:...xx..--...xxxx.:....x..x.xx...::x......---:x.....:......:....................::x..:x:................x.......x:.......x.. 17M16I9M1D8M3I13M1I162M2D28M6D11M4D16M3D9M4D12M7D35M4I33M6I14M4I21M1I7M15D16M1D29M24I35M2D23M3D91M5D13M4I13M7I50M1I10M3D10M2I36M1I10M1D21M6D18M4I11M3D44M43D9M11D12M5D3M8D10M16D22M16D13M34D37M2D13M2D22M5D22M4D28M2D12M2D23M15D7M18D17M9D11M15D16M7D26M8D9M3D6M11D13M8D50M1I22M1D14M3I27M2I23M10I19M2D11M1D21M2I32M1I7M10D21M1I23M3D32M2I32M3D79M 1149/1569 73.2% 1669/94230402 0.0% 430/1569 27.4% 117849210 72365345 +3054 chr4 + 190214555 152919920 152919919 152919970 51 GAAGGCAATTCTGGTAGGGAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 88439635 88439634 88439685 88439635 88439634 88439685 51 GGAAACAATCCTCATAGGAAATCTCTTTTCTTTTTCTTTTTTCTTTTTTTT .:.::....:..x:....:..x:......:.....:......:........ 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 64480285 NA +3322 chr4 + 190214555 152926806 152926805 152926856 51 AAAAAAAACAAAACAACAAAAATACAAACAAGCAACAGTAACAACAAAAAC chr4 + 94230402 12866362 12866361 12866412 12866362 12866361 12866412 51 AATAAAAACAAAACAATCAAAAACCAACCAAGCAACAACAACAACAAAAAC ..x.............:x....xx...x.........::............ 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 140060444 50154111 +3569 chr4 + 190214555 152933597 152933596 152933675 79 GTGGTGCATGCTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 76900396 NA +13497 chr4 + 190214555 152943054 152943053 152943561 508 TACTATGCATGTTATGAATTGTGTCTCCTTGGTCAGTGATAAAGAAAATGGGAATATTGCCACAGCACCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCCACCCCCTCCATCTCCACCATGTTCATGTTCAAGGGAAGAGTGTCCTTCCTCCCCTCCTCCACCCCCACCACCTCCACTTCCTGGGGAGCCTCCCATCCCACCTCCCCCACCAGGCCTACCCCCAACTACTCACATGAACGGCTACAGCCACCTTGGTAAGAAAAAGCGGATGAGAAGCTTTTTTTGGAAAACTATTCCGGAGGAGCAAGTTCGAGGCAAAACCAACATCTGGACCTTGGCAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAGGAGCTCTTTGGGCAGCAGGAAGACACCAC----CAAGTCTTCCCTTCCTAGGAGAGGAAGAACTTTAAATTCATCCTTCAGAGAAGCTCGAGAAGAGGTAAGA chr4 + 94230402 35068914 35068913 35069364 35068914 35068913 35069364 451 TAACATGCATGTTATGAATTGTCTCTCCCTGGCCAATGACAAGGAGAATGGAGCTCTCTCGGTGGCGGCAGGATTGATGAGCGAG--GAC-ccgccggccgcctccccgccacccccgccaccatgccccccagc------------------aggggca------cccccggctccgccgctgcccccgccgccccccccgctgccAGGGCCCAGTTTGCCGCTGCACCCAC--AGCTGACC----------------AATGGGCACGATGGCCACAGCAGGAAGAAAAGGATGCGGAGTTTCTTCTGGAAAACCATCCCTGAGGAACAGGTCCGGGGCAAAACCAATATCTGGACGATTGCTGCGAGGCCA------CAGTACCAGATCGACACCAAGACGATCGAGGAGCTCTTTGGGCAGCAGGAGGAAACCAAACCGCCAGACTC----------GAGGAGCCGGTCCTTAAAAGCTTCTTTTAAAGAGACTAAGGAGGAGGTAAGA ..x:..................x.....:...:..:...:..:..:.....::x.x.:x.x:::..:x.x.....x....x:.:.--...-..x..xx.x..x:.:..x.....:..x..x...:x...:...x.------------------.:...x.------..::.xx.:..x..x.::.....:..:..:..x.:x.:xxx:.:...:xx:x.x..:.:x.x.....--:..:x...----------------..:..x:..:::x:..x::.:.:...:..:x.....x.:..:..:..:........:..:..x.....:..:..:..:...........:........xx.x..x..x....x:------..x.....:..:..:..x.....x..:.......................:..x....x----.x..x..:----------...::.xx.:x.:.....xx.x..:..:.:...::..x::..:......... 85M2D3M1D44M18D7M6D67M2D8M16D114M6D59M4I8M10D52M 302/447 67.6% 451/94230402 0.0% 65/447 14.5% 117874140 72340415 +5930 chr4 + 190214555 152953408 152953407 152953569 162 TGTTGCATTTTGATCGGTTTTAATTATCTTCTTTCTCCATCTCTTTTTATTTGAATTTAGTAATCCTATGTGTCCTTATTTTTTTTTC-CAGATTACTATTTTGGATGCAAAACGGAGCATGAACATTGGGATATTTCTTAAGCAATTTAAGAAGTAAGATTT chr4 + 94230402 35074859 35074858 35075013 35074859 35074858 35075013 155 TGTTGCATTTTAAGGAATGACACCTGCATTGTGTGCTCTTCTCTTAC-ATATTGGTTGATTAATC-------TCTTTTTCTCTCTCTCTCAGGTTTCCATTTTGGATGCAAAACGAAGTATGAACATTGGGATATTTCTCAAACAATTCAGAAAGTAAGATCT ...........:.xx::.xx:.x:.::x..x.x.x::.x......x:-..x.x::..x.x.....-------..:..x.:.:.:.:..-...:..x.:.................:..:....................:..:.....:.::.........:. 47M1D17M7D16M1I74M 110/154 71.4% 155/94230402 0.0% 9/154 5.8% 117878549 72336006 +6684 chr4 + 190214555 152954191 152954190 152954323 133 GGAATGTGA----TTCATTGTCTTTTCAAGGTCTCCTCGGTCCATTGTAGAAGATATTCATCAAGGAAAAAGTGAGCATTATGGATCAGAGACCTTGCGAGAATTTCTTAAGTTTTTGCCAGAGTCAGAAGAGGTAA chr4 + 94230402 35075583 35075582 35075719 35075583 35075582 35075719 137 GAAATGTGAATGCTTGATTGTTTCTTCAAGGTCTGCTGAATCCATCATTGAAGATATTTATCAAGGAAGAAGTGAGCCCTATGCTTCTGAATTGCTGCATGAATTCCTTAAACTATTACCAGAAGCAGAGGAGGTAA .:.......----..x.....:.:..........x..x::.....::.x.........:.........:........x:....xx..x..:x:x:...:x.....:.....::.x..:.....:x....:....... 9M4I124M 100/133 75.2% 137/94230402 0.0% 4/133 3.0% 117878608 72335947 +11453 chr4 + 190214555 152960547 152960546 152960885 339 TTTCCATTTGTCTTTTAGGTAAAGAAGTTAAAAGCGTTTAGTGGCGACGTGTCGAAGCTGTCTCTGGCAGATTCCTTTCTGTATGGCTTAATTCAGGTGCCAAAGTAAGGATACAGTCGCTGGTTATTATTCT--TCACGCAGTAAGATTTTTAAACTAATGACATCAAATTCTACAGTTTTACTTTTTTATTTTTCAGCTATTCACTTCGGATTGAAGCCATGGTGCTAAAGAAGGAATTTCTACCTTCTTGCTCTTCTCTATATACAGATATAACAGTTTTAAGAACTGCTATAAAAGGTGAGTCAACATATGATCCTTCGCAGAAT----TTGTTTTTATTA chr4 + 94230402 35084116 35084115 35084448 35084116 35084115 35084448 333 TTTTTTTCTCTTTTCTAGGTAAAGAAATTAAAAGCCTTTGATGGAGATGTATCAAAACTATCTCAAGCCGATTCCTTCATGTATTTACTAATCCAAGTGCCAAAGTAAGGAGATAATAGAT-----TTATTCTGTTCATGATGTATTCTCTTT-------TGGCTGTCAGTTCTAAAACTGTTTGTTTGTGTGCTCCAGCTATGCTCTTAGGATTCAAGCCATGGTGTTAGAGAGGGAGTTCTCACCCTCCTGTGCTTCTCTACAGGATGACATGAAAATTATAAGACAGGCAACAAAAGGTAATTAAGCATGTTGGGACACGTATAATACTCTTGTTTTTGTTA ...::x.:.x.:..:...........:........x...::...x..:..:..:..:..:....x:..x........:x.....xxx:....:..:...............x.:.:.x.x.-----.......--...:.xx...xxx.:...-------..:.xx:x.:.....x.::.x.x:x...x.:.x:.:.......x.x...x.....x...........:..:...:...:..:::...:..:..:x........:.x:xx..:..:.x.:..x.....xxx..x.:.......:.x.x.:...:.x:xxx:x..:.x...----........:... 121M5D7M2I18M7D169M4I12M 224/327 68.5% 333/94230402 0.0% 18/327 5.5% 117876431 72338124 +11968 chr4 + 190214555 152962793 152962792 152963146 354 GTGATGTGTTCTTTTTGATAGAACTGATGTCATGTGAAGAGCTACATTCAATATTACACTTGGTGCTCCAGGCTGGGAATATCATGAATGCAGTAAGTAAAATCCAAAA------CAATTGTAATGTTATGTTTTCAACCTTGTCTATCTAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACATAATTTTTTCTTTTTGATTTGTCTTCTTTAGGGAGGGTATGCCGGCAATGCAGTAGGATTTAAACTGTCTTCTTTGCTCAAATTGGCAGACACAAAAGCAAACAAACCTGGGATGAATCTCCTGCACTTTGTTGCACAGGTATGTGGAAATGATT chr4 + 94230402 35087001 35087000 35087320 35087001 35087000 35087320 320 GCAATTTTCTATTCCTTACAGAGTTAATGACTTGTGAGGAGCTGCATTCCATATTGCACTTGGTCCTTCAGGCTGGGAATATTATGAATGCGGTAAGTGACATCCAGAATGGAGACGGCTGATTGGCCAGACTT----CCTTGTTAGTATTGCAGTCCATTTATTT---------------------------------CACACACCGCAACTGTTTGCTCATTT---CTTTTTAGGGAGGTTATGCTGGCAATGCTGTTGGATTTAAGCTGTCATCACTGCTCAAGCTGGCGGATACAAAAGCCAACAAACCTGGGATGAGTCTGCTGCATTTTGTTGCGCTGGTATATAAGAACTATT .::..x.x:.x..::.x.:...::.:...x.x.....:.....:.....x.....:........x..:..............:........:......:.x.....:..------.:::..xxxx.::.x::..----......:x:.x.x:x:..x::.x.:.x.---------------------------------:.:...:x::xx:.x:..x:.x....---:.:..........x.....:........x..x........:.....x..x:.......::....:..:........x................:...x.....:........:.x.....:.:::..:x... 109M6I19M4D28M33D26M3D132M 222/314 70.7% 320/94230402 0.0% 46/314 14.6% 117875792 72338763 +3338 chr4 + 190214555 152962897 152962896 152963015 119 CAAAACAATTGTAATGT-----TATGTTTTCAACCTTGTCTATCTAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACATAATTTTTTCTTTTTGATTTGTCT chr4 + 94230402 6857561 6857560 6857684 6857561 6857560 6857684 124 CAAAGTATTTATGGTATAAGTATCTGTTCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCTAGTCT ....::.x..:.::.:.-----.x....:.x::.x.x:.::x..x.:.::.:.:.::..:::.::..:.:x:.........x.........:.x.:x.x..........::.:..:x:.x.... 17M5I102M 71/119 59.7% 124/94230402 0.0% 5/119 4.2% 146105336 44109219 +5005 chr4 + 190214555 152964888 152964887 152965130 243 TTCTGTTTTTGTTCCAGGAAGCCCAAAAGAAAGATACCATTCTTCTAAACTTTTCAGAAAAATTGCATCATGTTCAGAAGACTGCTAGGTGA-GCAAGTGAATTGTGAGAATTCAAGATT---CTTTACCTT------------TTTATGAAA-ACTGATAAATAGTTAAAACTTTTAGATTCCAGTTTGAAGTCTAAAAGGTTT-----TGTTTCATTGAACTTTCAGACTGTCCTT--CATTTGCTTAACACAGGTGTGTGTGCA chr4 + 94230402 35088181 35088180 35088439 35088181 35088180 35088439 259 TTCTGTTT--GTTTCAGGAAGCCCAAAAGAAAGATGCTGCTCTTCTCAACTTCTCAGAGAAAATTAGGGATGTTCATGAGGCCGCCAGGTAACTCAAAATAAACCTGAAAACTTATGGTTAAACTGTGACTTGGAACTCTCTGATTTGTGAAGCAATTAGGTTTATTCAAAA-----AAGTCTTGGCACAAAACCTGAGATCTTTACAAATGTTTACTGTAACTTTGAGAGCTTCATTTCCATTTGC-TAGCAGAAGTATGCCTGCA ........--...:.....................:.:::......x.....:.....:...x.xx:xx.......x:..:.:..:....:.-x...:xx..x:x...:..:.:.x.:..---..x.:x...------------...:....:-.x.x.x:xx..x.:....-----.::.::::.:x::..::..:.:.xx...-----.....xx.xx......x...x:x..x..--.......-..:..x.:..:..:x.... 8M2D82M1I27M3I9M12I9M1I18M5D28M5I28M2I7M1D19M 159/235 67.7% 259/94230402 0.0% 32/235 13.6% 117876707 72337848 +6461 chr4 + 190214555 152967974 152967973 152968107 134 TTTTAGATTATCTCTGGAGAACACGGAGGCAGAACTGCACTTGCTGTTTGTCAGGACAAAATCACTAAAAGAAAACATCCAGCGGGATGGTGAACTTTGTCAGCAGATGGAAGATTTTCTTCAGGTTTGTAGGT chr4 + 94230402 35090509 35090508 35090642 35090509 35090508 35090642 134 TTTTAGGTTATCCATTGATAACGTAGAAGCAGAGCTCCACTCACTCTCTTTCAAGACAAGATCTGTTAAAGACAGCATTCGACGAGACCCGAAACTCTTTCACCAGATGGAAAACTTTCTGCAGGTTTGTAGGT ......:.....:x.x..x...:::..:.....:..x....::..x.:.x...:.....:...xx.x.....x.:...:.::..:..:xxx:....:.x...x.........:.:.....x............. 134M 96/134 71.6% 134/94230402 0.0% 0/134 0.0% 117877465 72337090 +9334 chr4 + 190214555 152972349 152972348 152972544 196 CAGTGTGTGTTCGTTTGTTTTTCCGCAGTTTGCCATAGAAAAGCTGAGGGAACTGGAATGCTGGAAACAAGAGCTCCAGGATGAGGCCTACACCCTTATAGATTTTTTCTGTGAAGACAAAAAAACCATGAAACTGGATGAATGCTTTCAGATATTTAGAGATTTCTGTACCAAATTCAACAAAGCAGTTAAGGTA chr4 + 94230402 35092394 35092393 35092583 35092394 35092393 35092583 190 CATTGTATGTTC------TTTGCTACAGTTTGCCGTGAGACATCTAAAGGAGCTAGAACACCAGAAACAAGAATTAGAAAAGGAAGGAAATGCTCTCATTGACTTCTTCTGTGAGGACAAAGAAACTATGAAGTTGGACGAATGTTTCCAGATATTTAGGGACTTCTGCTTAAGATTCAACAAGGCTGTTAAGGTA ..x...:.....------...x.::.........:.:::.x.x..:.:...:..:...::.::.........::.xx.::.x..:.xxx.::.:..:..x..:..:........:......:....:.....::....:.....:..:...........:..:.....:x:x.:.........:..x......... 12M6D178M 136/190 71.6% 190/94230402 0.0% 6/190 3.2% 117879955 72334600 +32969 chr4 + 190214555 152974671 152974670 152976727 2057 TCAGGACAACCACGACCGGGAGGCGCAGGAGCTGAGGCAGCTGCAGAGGCTGAAGGAGCAGGAGCAGAAGCAGCGCTCCTGGGCAACTGGGGAGCTGGGGGCATTTGGCCGGAGCAGCAGTGAGAATGATGTGGAGCTGCTGACCAAGAAGGGTGCAGAGGGCCTGCTCCCTTTCCTGCACCCCAGGCCCATCAGCCCCTCCAGCCCCTCCTACCGGCCCCCGAACACCCGCCGCTCCCGCCTCTCCCTGGGTCCCTCTGCTGACCGGGAGCTGCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGAGCAGCCCCCGGCAGGCCCGGCCCACGATAGCCTGCCTGGAGCCTGCAGAAGTGAGGCACCAGGACTCCA--GCTTTGCACACAAACC-----TCAGGCCTCGGGGGGCCAGGAGGAGGCCCCCAAC--CCACCCTCAGCACAGGCGCACCAGCTTGCAGCCGCCCAGCCTGAGAACCATGCCTCTGCC--TTCCCCAGAGCTCGGCGCCAGGGCGTCAGTGT-----CCTCCGAAAGAGGTACAGTGAGCCGGTGAGCCTGGGCTCAGCACAGTCCCCTCCTCTCTCGCCATTGGCTCTGGGAATTAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCTGACTCTGAGTGACTTCAGCCCGATGGAGCTAGAGTCTGTGGGGCATAGGGGCCCGCAGTCCCTCAGTGCCAGCAGCAGCAGCCTGACACCCATGGGCAGAGATGCCCTGGGGAGTCTCAGCC-------CAGCGCTGGAGGATGGCAAGGCTGCCCCCGATGAGCCTGGAAGT-GCAGCTTTGGGATCTGTGGGTAGCAGCGACCCTGAGAACAAAGATCCTAGACCTCTGTTCTGCATCTCGGA---CACCACCGACTGCTCACTGACCCTGGACTGCTCAGAGGGAACCGACTCCAGACCCAGAGGCGGGGACCCGGAGGAAGGCGGGGAAGGGGATGGCTCCATGTCCTCTGGGGTTGGAGAAATGGGGGACAGC-CAAGTCT---------CCTCCAACCCTACATCCAGCCCCCCTGGGGAGGCTCCTGCCCCCGTCTCTGTGGATAGTGAG------CCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGCGTCTCCCGGGGCCTCCAAGCCCGGGAGCGCCCGGCGGAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGCCGGCTG---GAGGCGACCAG------AGCTGTCATCCCG-GGGGCCCTCCCAG----AATCCCCCCA--GCAGCACAGATACTGTGTG-GTCACGCCAGA-ACTCCGTGCGGAGGGCCTCCACAGGC-----------GCCGAAGAGCAGAGGCTGCCGCGGGGGAGCAGCGGCTCCAGCAGCACCCGTCCGGGGAGGGACGTTCCCCTGCAGCCCAGGGGTTCTTTCAAGAAGCCCAGTGCCAAACCACTCAGGAACCTCCCCAGACAGAAGCCTGAGGAAAATAAGACCTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAA----GACCCCGTCAGTGCCCAGCGTCCCCCACGAACTACCCCGTGTCCCGAGCTTTGCCCGGAACACAGTGGCCTCCTCCTCTCGAAGCATG--AGAACAGATCTTCCTCCCGTGGCCAAAGCCCCCGGCATCACTCGGACAGTGTCGCAGCGGCAGCTGAGGGTGAA------AGGGGACCCCGAGGATGCCGCTCCCAAGGACA------GCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCC-----AAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGGCCCCTCTGAAGGCCAGAGGGGCTGGGGAAAGGGCCTCCCTCCGTCGGAAGGACTCCAGTCGGACCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTGATGGG chr4 + 94230402 35095202 35095201 35097252 35095202 35095201 35097252 2051 TCAGGAAAACAGGGAACGAGAGATCCAGGAGCTTCATCATCTGCAAAGGCGAAAGGAGCTGGAGGAGAAACGTCGATCGTGGGCCGCTGGAGAGCTTGGAAGCTTTGGACGGAGCAGCAGTGAAAATGATGTGGAAATGTTGGCCAAAAAAGGACTTGAAGAGTTTCTTCCCTTCTTGCAGCAGAGACC--TCAA-------AGCCCTTCATATAGAAACCCCAATTCCAAACGCTCTCGACTTTCTCTGGGGATTACTGCAGACAGAGAGCTGCAGAGTTTCCTGGAAATTTCAAAAGAA------GAGGATCCCAATAAATTTAACAGCCTTCCCCGTGCAAATACCCGACAAGTAAGACCCAATGTAGCCTGGACTGAATCCAAAGAAACTAGAGATCCCAATTTAAATACCTTGCACTTACACCAACAGTCTGAAACCAAAGGGAAAAGTAGTGATCTGCTGCAGTTGCGTCCAGCACAGTCCAGTCACTTTG--GTGGCTCAACCAG-------TACTGGTGCCCATTATCCACAGCGAAGCACCA--ACTGCAATGTGCCTGCTTCC--AACGCCTCCTGTGAG-----GAGTCT--GCTGATATAAATGCTC--------------TGGCCCTTGCAGTTGAGGAGCACGAACTTGTTAAAGGATTAAGGAAGTTTGATATTCAAGGAGCAAAGCCAGCAGAGGATACGCCTCTAATATATTTAGAGGATGTTGGTGGAACAGATGTGGAGACTCTAGATGATCTAAGCTTGCATTCCCTTAGCACTGCTGATGACGATCTGCCTCCAGCTTGCAGAAGCTCCAGAGACACCCACAACCATAAAGGCAAGGC-AGTGGGTTGCAAGAGTGAAGCTTCAGAGCCTGGCAGCAGCAGCCCTGTG-TCGATGGACACAAGTATTTCGGGAAGTAGGGAAGATGGGCCAATGTTCTATGTGTCGGATACTACCACTGACTGTTCTTTGACACTGGACTCTGAAGAGGGGAATGATTTTAAATCAGCAGGC---------AATGAAGTAAGAAGTGAGGCTGGCAAAACACGCTCTTCCGT-----GAATGGTGCTCAGTACAGGCCTAGAACACTCTTCCCAAACCTAAATTCAGCTGCC--AAGGATCCGTCTCTTCATGCTTCCACGAATGATAAGGATGATGCCAACAGCAAACATATGCTTTCTAAAGAAAAATCTGTAAAAAGTAAAGACCCAGTAGGACCAAAGAGAAACTCTCTAAAAGACAGATCTCCAAGTTCCTCAAAATCCAGTGGTACTCGCCCTAGCCACACGGCTTCTTCCAGACCTGTTAGAACTTTGAATGCCTCTGAGAATGAAAGTATGAGGAAGGTGGTGCCTATTTCTCGGTCAAACAAAGCACCAAGCAGTGTGAAAAAGCCAGAAGCCAAGCCAGCGCTTCGTGAGGCTAGTACAGTGGAAAGCCGCCTATCTCGTCGCAGCT-CTGTCCGAGGCACTACAGACACACTGCCAAGAAGTCCT-TACAGGCATAGCATGTCAGTAGAAGAGCCAAGGTTGCAGAGGGGGACTGTCACCTCAAGCAGTGCTCATTTTGAGAGGGA---------------CAGAGTTGCCCTCAAGAAGCCAGGCTCTAAACCTGTTAGGAATACTGCAAAATCGAAGATGGATGAGGCAAAGATGTGTCGCTCCAG---CGTAAAACCCCAGACCCCTGTAGATGACACCAAAGTTAGCCCTGTCAGTGC-------TCCCAAAGCACCATCCAGTGTCCCCAGCTTTGCAAGGAATACAGTGGCTTCTTC--TTCAAAGCGTGCAAAAGTGGATCTCTCCACCTCGTCCAAACCTCCAAGCATCACCAGGTCTGTGTCCCAGAGGCTGCCTAAAGTGAAGCCAGCAGCAACCTCTGATGATCTGAGTCCAAAGGAGAATGGAGGGAGTACTTTAAAGAGAGCAAATAGTGCCAGAGTGTTTGGAAAAAGCATCGTCCAGGG-----AGACACTGTCAGCACAAAAGCAGAGTCTTCACCAAAGGAGCAGGGGACAGTGGAAAAGTCCTCTCTTAAACTGAAAGATGCAAACCGGACCACAATAGGTAAAATACTAAAGCCGTTACTGAAGTAAGGAG ......x...x:x..x..:...::x........xx:x..x.....:....x:.......x....x....:.:x..x..x.....x:....:.....x..::xx.....x..............:...........:x..:..:....:..:..xx:x..:.:x:.x..:..:...:....x.xx..:..--...:-------.....:..x..:x.:xx...x..:x..x:x.....:..x..:..:.....xx::x....x...x.:.......x..x:...:....:.x:..x.xx.:x------.....x........:..:x.......x.....x:xx.::x....:..:.:xx.:....xx:.......xx:x..::.::x....::x..:x.:.xx:.:.:x.--:.:......x:.x...-----..x.:xx:.:::...xx.:.x:.x.::.:x.x:.--:::.x::........x.xx::..x:...--.:x..:..:..x.-------.:.:xx....--..x:...x...xx:..:...--:.xx..:...-----.:...--..x:xx.x.x.....-----...:..--...x.xxxx.:.x.:.--------------....:..x.x.:..:.......:..:..x..x.x...::.::xxx....::.:x.:..:..xx.xx..xxx:::.....x..x:.:.x:x.:xx.:.:::x..:x.::.:xx:.::..xx.:...x..x.:.:xx..xx::..::...x.....:..::.::x::::::.:::...x.x..x::xx.....:::x..xx:.:x.x:.x..:..-------..:x..-:.x..:.x.....:x..xxx.:xxx........x..:-.....::..x.-..x:...::.xx..::x::.x.::.::.::..xxx.:.:..xx......:::.x.....---:.....:.....:..x:....x.......x:xx......:.x:..:.::.:.:.x:x....---------:.x....xx:.:::x.:..x....xxx.:::x....xxx..-----:.....x.xx...:-..:.:..---------:::....x....x..:....:x..--::...xx.x:..x::.x:.::..:::.:..::.:..------x...:.x....:x:::xx..x:.:.::..x...:.:::x.....x.....:x:x....x..........::...:..:.....x:x:.....x:.xx....x..::..:.x:.::.:..x.xx.....x:x...xx:xx...:::....xx.:..::...x:.....x.....:..:..:...x.x.....x:....:..:x.:x:...x.:..:..xxx.x:..x.---..::x::....------...::x.::::..-.:...:xx:x...----..x..x..:.--x.:x.:...x.-....x:.-.x...xx....-..x.:.:xx:..:.x...-:......-----------.:x.......x:...:...x.x......x::x.:x...x.....::.:.:.::x.:......---------------...:.x.x.::..........x:.:x.:.....xx.:.....:x::x.x.:.:x....x:x..x..::xx....:x..:...x..x:---..x:::x..:x...x:..::x...x..xx....----::...:........-------:...x.x.x..:.:..x.......x........xx....:........:..:..--:..:....:..--.:.:::.....::.:x..x:.x.....x.:..x:.......:x..x.x.....x...x...x..:x.::.....------..x::x.:.:..x...x:x:x...x.....x.------.x..:.....:.:.x....x.::......x.:.:x:::-----...x.x..:....:.-----:..x:x.x:...::.x..x:.:...x.::.x.::....xxx::...:.x.x.....:.x....:..:x:x.x...:..:x.x.::........:x.:..x.:...x..x..x..x....x.....:.x.:. 189M2D4M7D99M6D103M2I16M5I34M2I28M2D13M7D10M2I20M2D10M5I5M2D15M5D6M2D16M14D213M7I6M1D37M1I11M1D59M3I61M9D41M5D14M1I7M9I24M2D36M6I227M3I11M6I13M1I13M4I10M2I11M1D7M1I11M1I18M1D7M11I62M15D87M3D33M4I14M7D54M2D11M2I74M6I32M6I38M5I15M5D131M 1175/1956 60.1% 2051/94230402 0.0% 196/1956 10.0% 117879469 72335086 +3022 chr4 + 190214555 152986042 152986041 152986084 43 ATCTCAAAAAAAACCAAACCAAAACAAAACAAAAAAACAGGGA chr4 + 94230402 29695899 29695898 29695941 29695899 29695898 29695941 43 ACCTACAAAAAAACCAAACCAAACCAAAACGAAAAAACAGAGA .:..xx.................x......:.........:.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 123290143 66924412 +3486 chr4 + 190214555 152986048 152986047 152986098 51 AAAAAAACCAAACCAAAACAAAACAAAAAAACAGGGACAACATCAAATGTT chr4 + 94230402 67450367 67450366 67450417 67450367 67450366 67450417 51 AAAAAAACCAAACCAAAACAAAACAAAAAAACCCAAGCAACAATAAATGCT ................................xx:::.....x:.....:. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 85535681 NA +3550 chr4 + 190214555 152986719 152986718 152986836 118 TTCTTGCAACTTCATGTAT--------GTGAGTCTACAATTTTCTTTCTTTTCTTTCTTTCTTTTTTCTTTCTGTCTCTCTCCTTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTT chr4 + 94230402 48874866 48874865 48874991 48874866 48874865 48874991 126 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ....:x.xx.....::...--------........x:.x...:....:x.:..:.x...x::...:.:.x...:.:x..::.:.:....x:...x...x.:.::.xx.x...x.x.....:...:. 19M8I99M 76/118 64.4% 126/94230402 0.0% 8/118 6.8% 104111853 86102702 +3994 chr4 + 190214555 152986729 152986728 152986922 194 TTCATGTATGTGAGTCTACAAT-TTTCTTTCTTTTCTTTCTTTC---TTTTTTCTTTCTGTCTCTCTCC-TTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCC-----------TTCCTTCTCT----CTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTT chr4 + 94230402 71957314 71957313 71957524 71957314 71957313 71957524 211 TTCATATATTTG---CCAAAATATTTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCTTGTAGGATCAGTACTTTTTCCCACTTCCTTACCTGTTCT .....:...x..---.:.x...-...::.xx:x....x:..:..---.:..x:..:.:.....:.:...-.....x.x.....::.:.:...::....xx..:x.:x.......:-----------......xx..----.:.xx...::..:...:.:...:..:.......:.:x.xxxx..xx.x:..:..:.:x.......x.:.x:.:. 12M3D7M1I21M3I22M1I45M11I10M4I74M 124/191 64.9% 211/94230402 0.0% 23/191 12.0% 81029415 NA +3749 chr4 + 190214555 152986765 152986764 152986886 122 TTCTTTCTTTTTTCTTTCTGTCTCTCTCCTTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:x...:.:.:::..:.x..x.:.:::....:....:.::..::.:.x....xx.:.:.x...:xxx....:x:.::...x.xx.x...:...::.:.::...........:..:..x:.. 122M 72/122 59.0% 122/94230402 0.0% 0/122 0.0% 89289647 NA +3118 chr4 + 190214555 152986770 152986769 152986873 104 TCTTTTTTCTTTCTGTCTCTCTCCTTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531207 30531206 30531310 30531207 30531206 30531310 104 TCATATCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC ..x.x.:.x.....x...:....:.x.xx..::.:..::.x..:...:x.:x.xxx.:.:x..x..x::x.:x.:.:......:...:..:...:......... 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% 122455563 67758992 +3404 chr4 + 190214555 152986782 152986781 152986905 124 CTGTCTCTCTCCTTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 72001425 72001424 72001548 72001425 72001424 72001548 124 CTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTGAAATACCCTCCCCATCTGCCTTTCATTTGCTTTTGTGAGATTTTTTTTTTCCTTTT ...:..::.::::.x..::..x.x...:.....:.......:...:.:........:x.xxxx.x..xx.x.x::..::.:x...x:.....x.:.x::...x.xxxx..:...:....:..:. 124M 74/124 59.7% 124/94230402 0.0% 0/124 0.0% 80985357 NA +3564 chr4 + 190214555 152986800 152986799 152986881 82 TCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCT chr4 + 94230402 57538430 57538429 57538511 57538430 57538429 57538511 82 TCTCTTCTGATTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCCT ...:.x:.xx...x..x..:......::..x....:........:..x.:xx...:....:....x..:.:.:.:..:.:.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 95448370 NA +3329 chr4 + 190214555 152986802 152986801 152986900 99 TTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC .:.:.....:..........x:xx.:....x:.::x:..::..x:.x:x:x....x:.x..x.:x..x.::.:...x.....:..:...:......... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 122455590 67758965 +3082 chr4 + 190214555 152986807 152986806 152986897 91 TTCTTTCTTTC----TCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...----.....x.:.:...xx..::.:...:......:.xx..:xx:.::x.....x.x..:....x.....::..::.:...... 11M4I80M 60/91 65.9% 95/94230402 0.0% 4/91 4.4% 69659873 NA +3694 chr4 + 190214555 152986812 152986811 152987013 202 TCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTCTT------CCTTCCTTTCTTTCT--CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT---CTTTCTCTTTCTTTCTTTTCTTTTTT chr4 + 94230402 22118198 22118197 22118418 22118198 22118197 22118418 221 tCTCACTCTTTGTTTGGCAGTACTTCCATTCCCTTCCTGGACTCACATTCTTTCC--CATGCTGCTATCATTTTTTTGTGATATTTCTTCTCATGTCCTTAGTACCTCTTCTTTTCTTTCAAACCTTTTCTCTCTCCATTTCCCACTTTTTATTTGGTCACTCTTCTTCTTATCTTGCCATATGTTGTTGTTTTGTACCTTCTCTTTTTTATTCTCCCTTCTT ...:x......x...xx.xx.x.....x.:.:::..::x:x:.:x.x.......:--.x.x..x..x..x..:...:x.--.x......:::x.x.:...------:....:........x--.::.....:...::x....::x....:.x.:.--------.....::.x....x.:x.x.x.:x..x....---.:........:..x:.:.:.:..:.. 55M2D22M2I19M6I15M2I32M8I31M3I26M 128/200 64.0% 221/94230402 0.0% 23/200 11.5% 130868614 59345941 +3919 chr4 + 190214555 152986847 152986846 152986999 153 CTCTATTTTTCTTTCT----------TTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTC-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---CTTTCTTTCTTTTCTTTCTCTTTCT chr4 + 94230402 6297089 6297088 6297254 6297089 6297088 6297254 166 CTCTATTATATATTCTGTATCCAAACTTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGT-TGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTATTGCT .......x.x:x....----------.....:..x.x....xx:.......x:...x.x.x....:.x.....:xx:..x.::..:.x.-.....x.:.......x.-.x....:..x.....:.::x.x.xx......---..xx....:....:...:.x..x.. 16M10I63M1I17M1D31M3I25M 106/152 69.7% 166/94230402 0.0% 15/152 9.9% 146689758 43524797 +3269 chr4 + 190214555 152986853 152986852 152987018 166 TTTTCTTTCTTTCTTTCTTTCTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCTTTTTTTGGAT chr4 + 94230402 72471345 72471344 72471516 72471345 72471344 72471516 172 TTTTTTCTCTTACAGATTTTCTTCTGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTTTTTATCATTACATATTTTTATGCTTATTTACATACTTATCATTAAAATCCCCTCTCTTCCCTTGCTCCCTCCCTTTCTGACTCCTTTGAAT ....:.:....x.xxx:........----.....x:..x::...:.:....:.:.:.....::..:::..xx:.x:x.....:.x..x..x:x.x...:.-.x...x:..x.x.x...-..x..xxxx::::..:....::...x...::..::.:.:.xx:.::....:.. 25M4I71M1I17M1I53M 99/166 59.6% 172/94230402 0.0% 6/166 3.6% 80515508 NA +3478 chr4 + 190214555 152986853 152986852 152986996 144 TTTTCTTTCTTTCTTTCTTTC---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCT---------CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCTT chr4 + 94230402 71957334 71957333 71957486 71957334 71957333 71957486 153 TTTTCTGACGTTCTGCCTCTCGAGTCTTGCCTCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTT---TCTCTCTCCTCTTTCTCTT ......xx.x....x:..:..---.::.x:..:.:.x.....:.::......x.x..:x...:::.:.....::.---------...:....xx::..xx:xx..:...xx:..x..:.xxx:.......:...---...:...::.......... 21M3I51M9I50M3D19M 91/141 64.5% 153/94230402 0.0% 15/141 10.6% 81029519 NA +3133 chr4 + 190214555 152986858 152986857 152986952 95 TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x..:x::x::.:.x.......xx.:::..........:.:.:x...xx::..x.::..x:x.:.....x.....::..::.:...... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 69659924 NA +3386 chr4 + 190214555 152986862 152986861 152986956 95 TTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x..:x::x.:.:.x.......xx.:::..........::...x...xx:...x.:::.x:x.:.....x.....::..::.:...... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 69659928 NA +3366 chr4 + 190214555 152986866 152986865 152986960 95 TTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ..:....x...x::x.:.:.x.......xx.:::.......::..:...x..:xx:...x.::..x:x.:.....x.....::..::.:...... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 69659932 NA +3625 chr4 + 190214555 152986876 152986875 152986991 116 CTTTCTTTCTTTCTTTC------TTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:..:------...::.::...:...:..x...:.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:.....:x.. 17M6I99M 73/116 62.9% 122/94230402 0.0% 6/116 5.2% 89289759 NA +3012 chr4 + 190214555 152986881 152986880 152986979 99 TTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 30531212 30531211 30531310 30531212 30531211 30531310 99 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTC .:.x.....:.......:.:x.xx..::..x.:..x..:...:x.:x.xxx...:x:.x:.x:.x.:x.:.::...x.....:..:...:......... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 122455669 67758886 +3197 chr4 + 190214555 152986894 152986893 152986976 83 TTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:..::......x.:...x:.:.:...:::.::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 95614867 NA +3781 chr4 + 190214555 152986898 152986897 152987011 114 TTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTT-----TCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCTTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTT-TCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTT-TCTTTCTTCCTTTTTATTT ..:x...:...:.:....xx.x...-.......:....:.:x..::.:.x....xx.....x.:.-----....x:..:..-----.......:..:::.....-........:.....:x... 25M1D39M5I11M5I18M1D19M 82/112 73.2% 122/94230402 0.0% 12/112 10.7% 89289780 NA +3412 chr4 + 190214555 152986901 152986900 152987011 111 TTTCTTCTTCCTTCCTTTCTTTCTCTCT--TTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCT-TTCTT-----------TCTTTCTTTCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCTTTT chr4 + 94230402 37898147 37898146 37898272 37898147 37898146 37898272 126 TTACTTCTGTCTGCTTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTCCTATTTTGATTCTGTTCTTGTAGGGACTGTTATTTCTTTGATGCTTTCTTGTCACTGTCTCTTTTTATTTTATTTT ..x.....x:..x.:.......:...:.--....x......-...x.:..:.x:...xx....-.....-----------.x.......xx.x.......x..x:.x...:.:...x....x.... 28M2I11M1I21M1I5M11I46M 84/111 75.7% 126/94230402 0.0% 15/111 13.5% 115088754 75125801 +3546 chr4 + 190214555 153008387 153008386 153008459 73 TGCACCTGTAGTCCCAGCTTCTTGGGAGGCTGAAGCAGAAGGATTGCTTGAGCCCAGGAGTTTGAGGCAGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:......x....::.......:x.xx:x.:.x::.....:.....:..:..x:...x.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 76975182 NA +3222 chr4 + 190214555 153023106 153023105 153023237 132 CCTGGGCGACAGAGAGAGACTCTGTCTCAAAAAACAAACAAACAAAACAAAAAAACACACTTCCATAAAAGCAAATTCTCA--TAACTGAAGTCTC----CAGGAAAAGAGCAAAGACCAGAA--CCCCGAGCATACGAG chr4 + 94230402 44082651 44082650 44082789 44082651 44082650 44082789 139 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAA-AAACTTGGACTCAGGAAAAACTTGAAGTAACTTAAGTTACTTCATAGAAAACTATTAAAAAAAAAAAATCCCATGGCATACAAG ..x.x..::x..:.x.:.x:......xx...........................-.x....xx.:xx.:.x...x::.x.--.....x....:x.----:..:...xx.x:...:.xx.:..--...xx:......:.. 55M1D25M2I13M4I23M2I15M 90/131 68.7% 139/94230402 0.0% 9/131 6.9% 108940455 81274100 +4131 chr4 + 190214555 153032920 153032919 153033031 112 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGTGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG----------TAAGCTGAGATTGTGCC-----ACTGCATTCCAGCCTGGCGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG-TGTGCCCTAAGCCTGC-TCCCAGCATGGTGAC ......x......:...........::.......:x.xx.....x.:...........:..x:xx:..:..:..----------:....x..x:-......-----x....-.:.....x...:... 74M10I10M1D6M5I5M1D15M 84/110 76.4% 125/94230402 0.0% 17/110 15.5% 76999716 NA +3701 chr4 + 190214555 153058163 153058162 153058272 110 TCCATCTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697122 63697121 63697235 63697122 63697121 63697235 114 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTT .:.x...:.....:xx.x:.........:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx.......--..:..:..:..:...:.......::. 60M6I22M2D26M 74/108 68.5% 114/94230402 0.0% 8/108 7.4% 89361041 NA +3100 chr4 + 190214555 153058168 153058167 153058252 85 CTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCT-------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCT chr4 + 94230402 83326937 83326936 83327028 83326937 83326936 83327028 92 CTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:x...x.:x.....x.......xx.:::..........:.:.-------:...x.::..x:x.:.....x.....::..::.....:.. 45M7I40M 58/85 68.2% 92/94230402 0.0% 7/85 8.2% 69731231 NA +3389 chr4 + 190214555 153058177 153058176 153058300 124 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTTTCTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCT--CTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....--...xxx:.:..x...::.:x.xx:...:..--..:..:..:..:...::........:x... 13M1D48M2I30M2D30M 79/121 65.3% 123/94230402 0.0% 5/121 4.1% 89361060 NA +3420 chr4 + 190214555 153058231 153058230 153058306 76 CTTTCTTT-----CTTTCTTCCTTCC--TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTTTCTTTTCTTTTT chr4 + 94230402 40564833 40564832 40564915 40564833 40564832 40564915 83 CTTTCTCTGACAGCTCTCTCCTTCCCAGTTCTTGCTGTGCTGCCTAACTTCCTTTTTTCCTTCTTTCCTCTTCTTATCTTTTT ......:.-----..:...:.:.:..--...:.x.:x.x..x...xx.......::.............:.....x....... 8M5I13M2I55M 59/76 77.6% 83/94230402 0.0% 7/76 9.2% 112493398 77721157 +3115 chr4 + 190214555 153061885 153061884 153061951 67 AAAACAGAACCAATAGAATATATATATATATATATATGTATATATGTACATATTCTTTAAAAAAGAA chr4 + 94230402 28780507 28780506 28780573 28780507 28780506 28780573 67 AAGGCAGAATTGGTGGGATATATATATCTACATGTGTGTGTACATACAAATATTCCCTGACAAACAA ..::.....::::.:.:..........x..:..:.:...:..:..::.x......::.:.x...x.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 124281378 65933177 +3071 chr4 + 190214555 153066373 153066372 153066427 55 AAAATCTCTCTCTCTTTTTCTATGTACACACACACACACACACACACACACACAC chr4 + 94230402 43671839 43671838 43671893 43671839 43671838 43671893 55 AAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCAC ....::.:.....x.:.x.x:.....:.....::..........x.....::... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 109394534 80820021 +3528 chr4 + 190214555 153091810 153091809 153091910 101 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGTGTATCTCTTGAAACCAGGAGGCGGAGGTTGCGGTGAGCCAAAATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::........:.--....:.:...........::........x.xx...x.x.x......x....:..x:xx:..:..::.------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 77058613 NA +3277 chr4 + 190214555 153096513 153096512 153096572 60 CTTTACAGATTAGTACATTGAGGCACAGAGAGGTTAAATCACTTGCCCAAGGTCACACAG chr4 + 94230402 33545653 33545652 33545712 33545653 33545652 33545712 60 CTTTACAGAGGAGGAAATGGGGGCACAGAGAGGTGATATCACTTGCCTCAGACTGCACAG .........xx..x.x..x.:.............x.x..........:x..::::..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 119550860 70663695 +3007 chr4 + 190214555 153104376 153104375 153104418 43 TTTTTTTTTTTTTTGGTGTTGTTGTTGTTTCTATTTCATTTAG chr4 + 94230402 26814904 26814903 26814946 26814904 26814903 26814946 43 TTTTTTTTTTTTTTGTTGTTGTTGTTGTTTTTAATTAATTAAG ...............x..............:..x..x...x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 126289472 63925083 +3374 chr4 + 190214555 153109212 153109211 153109282 71 CACCTGTAATGCTAGCTACTTGGGAGGCTGAGGCATGAGAATCTCTTGAACCTGGGAGGTGAAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.x.:.........::........x.x..x...x.x........::.:..x.xx:..:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 77076005 NA +3025 chr4 + 190214555 153109327 153109326 153109371 45 GAGACTGTCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAAAAAG chr4 + 94230402 7875203 7875202 7875247 7875203 7875202 7875247 45 GAAAATACTTAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAG ..:.x.:::x.............................:.:... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 145234124 44980431 +3282 chr4 + 190214555 153109339 153109338 153109377 39 AAAAAAAAAAAAGAGAGAGAGAGAGAAAAAAAGTGGGCA chr4 + 94230402 58693970 58693969 58694008 58693970 58693969 58694008 39 AGGAAAAAAAAAGAGAGAGAGAGAGAAAAAAAGTGGGTA .::..................................:. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 94415369 NA +3103 chr4 + 190214555 153121330 153121329 153121415 86 ACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTCAGATAAATCTAACACCTACAGCT chr4 + 94230402 18047933 18047932 18048018 18047933 18047932 18048018 86 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAAGCATATGCTAAGGTATGACTGACAGCT .....:.:.xx..:.x...:............x........xx:..:.x:.x........:x:.x::x..xx..xx..:x...... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 135073397 55141158 +3280 chr4 + 190214555 153133123 153133122 153133175 53 ACTGAGTGTTCAATTGGGTTTTTTTTTGTTTTTTTTGTTTTGTTTTGTTTTTT chr4 + 94230402 14148412 14148411 14148463 14148412 14148411 14148463 52 ACTGATT-TTTAACTGGGCTCTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTTT .....x.-..:..:....:.:.........x..x................... 7M1D45M 45/52 86.5% 52/94230402 0.0% 1/52 1.9% 138984711 51229844 +3029 chr4 + 190214555 153133138 153133137 153133185 48 GGGTTTTTTTTTGTTTTTTTTGTTTTGTTTTGTTTTTTTTGAGACAGA chr4 + 94230402 42875455 42875454 42875502 42875455 42875454 42875502 48 GGGTTTTTTTTTGTTTTTTTTTTTTTCTGCTGTTGTCTTTGAAAAAGA .....................x....x.x:....x.:.....:.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 110257683 79956872 +3045 chr4 + 190214555 153136396 153136395 153136489 94 AGTTACTTTTTAATAATAATTTTGTTTTATGTGTAAGTACATGGATATATACTTGCATACATAGA---------CACACAGCTAT-------TTTCTTGATGTGCTTTCA chr4 + 94230402 35034548 35034547 35034657 35034548 35034547 35034657 110 AGATACCTTTGAACAAATGTTTGTGTTCATGTGTATGTACATAGATGTATACATGCGTATAAAGAAACCTGCCTCATATACCCATCGTTGTATATCTTAATATATTTTCA ..x...:...x..:..xx:...xxx..:.......x......:...:.....x...:..:.x...---------..:.:.x.:..-------.x....:..:.::..... 65M9I11M7I18M 67/94 71.3% 110/94230402 0.0% 16/94 17.0% 118101848 72112707 +3346 chr4 + 190214555 153141494 153141493 153141582 89 AAATACTTTTCTTTCTTTTCCTCTTTCTTTCTTTCTGTTTTCTTTCTTTCTCTTTCTTTCTCCTTCTTTCCTTCTTTCTCTTTCTTTCT chr4 + 94230402 63350682 63350681 63350770 63350682 63350681 63350770 89 AATTATCCTTGTTTCTTTTTATCTTTCTCTCCTTATGTTTTCTCATTTTCATTCTTCTTATCATCCTAGGATTCTATGTCTCACTTTCT ..x..:::..x........:x.......:..:..x........:x:....x:.:.::..x..x.:..xxxx....x.x...:x...... 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 89790812 NA +3199 chr4 + 190214555 153141495 153141494 153141577 83 AATACTTTTCTTTCTTTTCCTCTTTCTTTCTTTCTGTTTTCTTTCTTTCTCTTTCTTTCTCCTTCTTTCCTTCTTTCTCTTTC chr4 + 94230402 93757956 93757955 93758038 93757956 93757955 93758038 83 AATGTTCATCTTCCCTTGCTGTCTTTTTCATCTTTCGTTTCTTTATTCCTCTGTCTTCCTCCTTTTGCAATTTCTTCTCTTTC ...::.:x....:.:..x.:x::..:..:x.:.:.xx.......x..:....x....:......:.x:xx..::......... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 59383539 NA +3593 chr4 + 190214555 153145605 153145604 153145674 70 CATGGTGGCGTATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.:.:..--...:.:...........::........x.xx.x...x..........::.... 15M2D53M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 77112408 NA +3199 chr4 + 190214555 153146862 153146861 153146934 73 TGCACCTGTAATCCTAGCTACTCCAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.:.......:x.:........x.xx.x...x::........::.:..x.xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 77113657 NA +3129 chr4 + 190214555 153148539 153148538 153148608 70 TGTGCCTGTGGTCCCAACTACTCAAGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTGGAGGCTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::.x...:..:...:.....::.:........x:xx.x.:.x.......:.....:..x.xx:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 77115334 NA +3208 chr4 + 190214555 153149734 153149733 153149792 59 AGAAAAAAAAAAAGAAAAAAGAAAAAGATGAAAGGAAAAAGAAAAAAAATTGGCAAGTA chr4 + 94230402 32321847 32321846 32321905 32321847 32321846 32321905 59 AGAGAAAAAGAAAGAAGAAAAACAAAGATGAAAGATTAAGAAAACAAAATGTGTAAGTA ...:.....:......:...:.x...........:xx..::...x.....xx.:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 120827887 69386668 +3321 chr4 + 190214555 153152205 153152204 153152286 82 GTTGTCAAGGGAACCGCGTGTCTGGAGGGAGAACAGGCTCTCCGGAGTTTCCCGGGAAACCACCCCCCGCAGAGGCAGGTGC chr4 + 94230402 20857935 20857934 20858014 20857935 20857934 20858014 80 GTTGCCATAGTAACACTTTCTCCGG--GGAAAACCGACTATCAGTAGTTTCCACAGAAACCACTCCCCGCTGAGACAGGTGC ....:..x:.x...xx:x.x..:..--...:...x.:..x..x.x.......xx:........:......x...:....... 25M2D55M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 132294270 57920285 +7459 chr4 + 190214555 153153031 153153030 153153363 333 CCTGTCATCTTTGTGGCTCCTTGTGGGGGAGGGGCGGGCGGTCTGACACAGTTATTAAACCTGGCAGCTGCGCTGGCGGCAC-TGAGGAGCATTTTGAGTG-AGCTTGCAGAAAATGAGGGGCTTTCAGCTGGTCGCCTGCTTGTCACCTCTCGCTGCCTGAAAGGCAGCTCTCAGAGCCCTTTCCTGTCCTTCTAATTA-CAGCGGCGGGGGCAGTGCGC----GCTTCGGGACGCAATTGGAAACGTGAGTATCTGTGTCCCCCGCGCTGCTGGCAGGCGGCTAGGCGCTTAAAGCTTCCAGACCGGTGGCGGGGACGGAAAGGCAGGGATAGGAGAG chr4 + 94230402 20858751 20858750 20859078 20858751 20858750 20859078 328 CCTGTCATCTCTCTGCTGCTTTATGGGAAAG-------CAGGATGACATGGTTATTAAATCTGGCAGCTGTGTTGTATGTGCATGGGAAGCAAGCAGAGCACAGCATATAGAAAATGAGTGGCTTTCAGATAACAGCCTTCATTTCACTGCTACTGGCTTGAAAGACAGACAGAAAAGCTCTTTCTCCTTTTTGTAATCACCAGTTGCTGGAACAGTTCGCAAATACTAC-AAATACAGTGGCAAATGTAAGTATTCCTTGCCTGTGCAGTGCTTTCAGATTGCTAA----TTGGTATTTCTACCTTGGTATTCTGCTTGGAAAAGCAGAGGGATGAAAG ..........:.x..x:x.:..:....::..-------.:.xx.....::.........:..........:.:..xxx.::.-..:.:....xx:x...::-...x.::..........x.........x.:::x....x.x.x....:x..xx:x..:......:...x:xxx.:...:.....::x.::..x....:.-...:x..x..::....x...----:..x.-::.::..:.x.x...:..:.....::x.xx..:x:..:x....xx...::x....:----..::x::...:.xx::...:x:xx.xx:.....:....:.:x.x..:.. 31M7D44M1I18M1I98M1I20M4I5M1D56M4D49M 200/321 62.3% 328/94230402 0.0% 19/321 5.9% 132294280 57920275 +3381 chr4 + 190214555 153155000 153154999 153155082 83 CGTAATGGTGGGCACCTGTAATCCCAGCTACTAGAGAGGCTGAGGCAGGGGAATTGTTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.:.....--...x....:.:.........x..:........x.xx.x...x:::..........:..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 77121803 NA +3167 chr4 + 190214555 153166484 153166483 153166540 57 CTCCCTTCCTTCCCTCCCTCCCTCTTTTCTTTTCCTTCCTTCCTTCCTTCCTTTTCT chr4 + 94230402 79176009 79176008 79176065 79176009 79176008 79176065 57 CTTCATTGCTTCCCCCCCCCCCCCTTTTTTTTTTCTTTTTTCTTTCCTATCCATTCT ..:.x..x......:...:...:.....:....:...::...:.....x:.:x.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 73990475 NA +3030 chr4 + 190214555 153166516 153166515 153166561 46 TCCTTCCTTCCTTCCTTCCTTTTCTCTCTCTCTCTTTCTTTTTTTT chr4 + 94230402 56907959 56907958 56908004 56907959 56907958 56908004 46 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTT ...x:....:.:....:.x.:............:...:........ 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 96258557 93955998 +3377 chr4 + 190214555 153171446 153171445 153171515 70 CATGGTGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x::.--....:.:...........::........x.xx:x...x.............:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 77138249 NA +3152 chr4 + 190214555 153174947 153174946 153175031 85 CCAAGTTC--CCACATCTTTGTCAACTGGTGCAGTTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTGAGAC chr4 + 94230402 58374859 58374858 58374944 58374859 58374858 58374944 86 CCAAGGTCATCCACACCTT-GTTTGTTTATTTGGGTTTTGTTGTTGTTGTTGCTTTGTTTTTGTTTAAATTTACATTGAATTGAAAC .....x..--.....:...-..:x::.x:.x::.x.................:.............x:x...::x..xxx....:.. 8M2I9M1D67M 61/84 72.6% 86/94230402 0.0% 3/84 3.6% 94800088 NA +3300 chr4 + 190214555 153174980 153174979 153175043 64 TTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTTGTTTTGTT-----TTTTTTTGAGACAGAG-TTTTGCTC chr4 + 94230402 79226641 79226640 79226710 79226641 79226640 79226710 70 TTTTGTTGTTGTTGTTGTTTTGGTTTGGTTTTGGTTGGTTGTTTATTTGTGTGAGATAGGGAATTTGCTC ......................x...x......x..x...-----...x.x.....:..:.-x....... 40M5I16M1I8M 55/64 85.9% 70/94230402 0.0% 6/64 9.4% 73948339 NA +3303 chr4 + 190214555 153176315 153176314 153176395 81 CAGTGATGTGCACTTGTAATTCCAGCTACTAGGGAGGCTGAGGTGGGAGGATTGTTTGAGTCCAAAATGTTGAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTG--GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--......x....:...........x.::........x:xx.x.:.x:::....::...:..xx..x:.....:.. 5M2D74M 56/79 70.9% 79/94230402 0.0% 2/79 2.5% 77143116 NA +3831 chr4 + 190214555 153177506 153177505 153177588 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGACAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x..........:..:..x:xx:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 77144309 NA +3091 chr4 + 190214555 153203880 153203879 153203944 65 AGACTCCATCTCAATAAATAAATAAATAAATAAATAAATAAAATAAAGATGTGCCAATCAAACAA chr4 + 94230402 73293887 73293886 73293951 73293887 73293886 73293951 65 AGATTCAAGTTCAATAAATAAATAAGTAAATAAAAATGCAAAACAGAACAAAGCCAACCAACCAA ...:..x.x:...............:........x.x::....:.:.:xx:x.....:...x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 79909993 NA +9302 chr4 + 190214555 153204291 153204290 153204485 195 TCCCCTACTTCGGAATGAAACACAATATCTTAAGCAAACAGAGCCCAAAGAGGCTGATCATTGGCTCTCATTGTCCCCTGATACTGTAGCCCCGCCCCTTTGGCTTGTGCTGACTAGCTGTTTATATTTTAGTAAGGGCCACCCTTTAACTCGGCAGCTTGATGACTATAATGGGCCCAGTTGTCTGCGGGCTGC chr4 + 94230402 20878693 20878692 20878885 20878693 20878692 20878885 193 TCCTCTGCTTAAGAATGAAACACGGTATCTTGAACGCCCAGAGCGTGAAGAAGCTAATCATTGGCTCGCATTGTGGCCAG-CAGGGCAGGCCCGCCTCTTTGGCTTGTGCTGACAAGCTGCTTATGTTTGTGCAA-GGCCGCCCTTCAACAGAGCGGCCTGCTGGCCGTAAGGGGACTAACTGTCTGAATGCTGC ...:..:...x:...........::......:.:.:xx......x::....:...:...........x......xx..x.-:.xx.:..x......:.................x.....:....:...xx.:..-....:.....:...xx:..:..:..x..:.::...x...x.:.::......x:x..... 80M1D54M1D59M 142/193 73.6% 193/94230402 0.0% 2/193 1.0% 132325598 57888957 +4338 chr4 + 190214555 153208558 153208557 153208690 133 CAGAACATAGGTCAAACAGAGCTGAACTCGAG------TCTCAGGTCTGCTGGTTGACTGCTAGTGACCTTGGGCAAGTCACTTACCCTCTCCAGT-TCTTGTTTTCCTCACCTG-AAAATGGGAACGATATTGTCTGCCT chr4 + 94230402 13242412 13242411 13242551 13242412 13242411 13242551 140 CAGAGCACAGGACAAG-ACAGCAAGACTTGAGGTCTGTTCCCAGCTCTGCCACTGACTCACCTGTGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTACCT ....:..:...x...:-.x...x::...:...------..:...x.....::x.x:x:::.:x...................x..x......:.:.-:..::x.....:..:...-.....:..:.::x..:.:::.:... 16M1D15M6I58M1I18M1I25M 90/132 68.2% 140/94230402 0.0% 9/132 6.8% 139966146 50248409 +3054 chr4 + 190214555 153211440 153211439 153211506 67 TGTTTGTTTGTTTTTGCTTGCCTGCTTGCTTTTTTGTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTG chr4 + 94230402 69155145 69155144 69155207 69155145 69155144 69155207 63 TGTTTGATTGTTTTTGTT----TGTTTGCTTTTGTGTTGGATGGGTGTTTTTTTTTTTTTTTTTTTG ......x.........:.----..:........x....xxx.xxx.x.:.................. 18M4D45M 51/63 81.0% 63/94230402 0.0% 4/63 6.3% 84056295 NA +3142 chr4 + 190214555 153221663 153221662 153221743 81 GGAAGGGAGGAAGGTAAGGAAGGAAGGATGGAGGGAGGAAGGAAGGAAGGAAAGAAGAAAAGAAGGAAGGAAAGAGTGAGG chr4 + 94230402 11181424 11181423 11181504 11181424 11181423 11181504 81 GAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAAG .:.:....x.:..:x.:...x.x.x...::....x:....:x:x:...::.:.:.........x:...:....:.:.:.:. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 142040239 48174316 +3040 chr4 + 190214555 153221786 153221785 153221850 65 AGGAAGGAAAGAGCGAGGAAGGAAGGGAGGGAGGGAGGAAATGAAGGAAGGAAGGAAAGCGCGAG chr4 + 94230402 31357956 31357955 31358020 31357956 31357955 31358020 65 AGGGGGGAAAGTGAGAGGAAGGGAGGGAAGAGGCAAGAAGAGCTGGGAAAGAAGGGAAACATGAG ...::......x.x........:.....:.::.x:..:.:.xxx:....:.....:..:.::... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 121863830 68350725 +3478 chr4 + 190214555 153232359 153232358 153232459 101 CGTGGTGGCGCACGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGAAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::....:.....--......:...........:x........x.xx:x...x.::.......::.:..x:xx:..:..:..------..x..x...... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 77199162 NA +3125 chr4 + 190214555 153244130 153244129 153244220 91 TTCTTCTTCTTCTTGTTCTTCTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTTCTTCTTCTCCTCCTTTTCCTTCTCCTTCCTCT chr4 + 94230402 79672605 79672604 79672695 79672605 79672604 79672695 91 TTCATCCTCCTCTTGTTCTTCCTCATGGGTTTCTACGTATTCTTCTGCCTCTTCTTCATTTAATTCACTCCTTTTCCGTGCTCCAGCCTTT ...x..:..:...........:.xx.xxx:....x.x.x.......x.:...:..:.x.:.xx...x.::.:...:.x.x....xx...:. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 73571525 NA +3235 chr4 + 190214555 153244154 153244153 153244235 82 TTCTTCTTCTTCTTCTTCTTCTTC----TTCTCCTCCTTCTTCTTCTCCTCCTTTTCCTTCTCCTTCCTCTTCTCCTCCTTCTTCT chr4 + 94230402 86491059 86491058 86491144 86491059 86491058 86491144 86 TTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTTCCCCCCCCCCTCTGTTTTTCCCTCT ...xx:..:..:..:..:..:...----...:......x.x.:.....:.:.....::..::..::..:.:...x:.::.:.:... 24M4I58M 54/82 65.9% 86/94230402 0.0% 4/82 4.9% 66753095 NA +5345 chr4 + 190214555 153244202 153244201 153244425 224 TTTTCCTTCTCCTTCCTCTTCTCC--------------TCCTTCTTCTCTTCTCCTTCCTCTTCTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT---------CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCT------TCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 66682107 66682106 66682359 66682107 66682106 66682359 253 TCTTCCTGCTTCTGTTTCTTCTCCGGTAGCTGCTGGGGTTGGTCTTCCTCTGTCTTTTCTCTTTCCTTCAAATGCTGCATTTCTTCCTCGTCTTTCTTTTGTTGGCTGGGGCCCTCAACCTCTTTCTCTTGCTTCAGTTTTATTTCAGCTTCTGGAAGCTCTTCCTCTTCTAGCTCTTGTCTCTGTTTTTCTTCCTTATTTTGTTCCACTAGTTCTTTTTGTTCCTCCAGCTGATTTCTTTCCTCTTCCTCCT .:.....x..:..x::........--------------.:xx.....:::.x..:..:.....:::.:.xxx.x..x.x::..:.....x..:.:..::.x:.---------....xx....:.:...:.x..:.xx:.::x:...xx.....------.....:......xx:....x.::..x..:......:.:x.:..x...:x..xx.....:..x...:..:xx:.xx.:.::...:.....:..:. 24M14I65M9I41M6I94M 140/224 62.5% 253/94230402 0.0% 29/224 12.9% 86562095 NA +3025 chr4 + 190214555 153244251 153244250 153244326 76 CTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTT chr4 + 94230402 34908180 34908179 34908255 34908180 34908179 34908255 76 CTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..:....xx...x::...........:...x....:.....:.xx..x:.xx.x.x:..x..x..x..:..:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 118336071 71878484 +3082 chr4 + 190214555 153244254 153244253 153244332 79 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTT chr4 + 94230402 34908177 34908176 34908255 34908177 34908176 34908255 79 TCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x:..x..x..x.....:.... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 118336077 71878478 +3150 chr4 + 190214555 153244254 153244253 153244335 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x:..x..x..x.....:.... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 118336080 71878475 +3093 chr4 + 190214555 153244256 153244255 153244436 181 CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTT------------CTTCTTCTTCTTCT------------------TCTTCTTCTTCCTCTTCTT------------------------------CTTCTTCTTCTTCTTCTTC-TTCTTCTTCTTCTTCT--TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT chr4 + 94230402 34908182 34908181 34908425 34908182 34908181 34908425 244 CTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTTGGTTACAAGTGGATTCTTCATCCACTGTAATAAGTCTATTGTTATTTTCTTCTAACTGTTCTTGCTGGGACTCACGTCTGTCATCAAACCCAGGTTCTTCTCTTATCTCTCCGTTCCTCCCAATGTGCTGCTCCTCTTGTTGTTGTCTTTGCTGCTGCTCCTCCTCTTCT .....xx...x::...........:...x....:.....:.xx..x:.xx.x.x:..x..x..x.....:....------------x......x..:x..------------------.:.......xx..x.....------------------------------x.......::.x::...:.-...:..::xx.x.x..--..:....x..x..x.::..x:.x:.x:..:..:...... 74M12I14M18I19M30I19M1I16M2I39M 123/181 68.0% 244/94230402 0.0% 63/181 34.8% 118336074 71878481 +3141 chr4 + 190214555 153244257 153244256 153244338 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x:..x..x..x.....:.... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 118336083 71878472 +3263 chr4 + 190214555 153244260 153244259 153244341 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336086 71878469 +3254 chr4 + 190214555 153244263 153244262 153244344 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336089 71878466 +3245 chr4 + 190214555 153244266 153244265 153244347 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336092 71878463 +3236 chr4 + 190214555 153244269 153244268 153244350 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336095 71878460 +3227 chr4 + 190214555 153244272 153244271 153244353 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.....:.xx..x:.xx.x.x...x..x..x.....:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336098 71878457 +3227 chr4 + 190214555 153244275 153244274 153244356 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:.......xx..x:.xx.x.x...x..x..x.....:..:. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336101 71878454 +3349 chr4 + 190214555 153244278 153244277 153244359 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x....:..:....xx..x:.xx.x.x...x..x..x.......... 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 118336104 71878451 +3218 chr4 + 190214555 153244281 153244280 153244362 82 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTT chr4 + 94230402 34908174 34908173 34908255 34908174 34908173 34908255 82 TCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ..x..x::.....xx...x::...........:...x.......:....xx..x:.xx.x.x...x..x..x..:..:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 118336107 71878448 +3127 chr4 + 190214555 153244379 153244378 153244443 65 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTAATT chr4 + 94230402 79672605 79672604 79672669 79672605 79672604 79672669 65 TTCATCCTCCTCTTGTTCTTCCTCATGGGTTTCTACGTATTCTTCTGCCTCTTCTTCATTTAATT ...x..:..:....x......:..x.xxx:....x.x.x.......x.:........x....... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 73571774 NA +29241 chr4 + 190214555 153257172 153257171 153258395 1224 CCCGGCTGCGTTGC-ACGGAGACTGCAC--TGGTCGCC-TCTCCCCTGGTGAATCCTGCAGTCACTTTCTGGTGATGGAGCTCAGCGGCCCAGCACGAGAGCATGGAAACAGCTGACTGCTGACTCAG-AGGGAAAGCAAGCCACCCA-CGAATCTCATTGCAGCTCGCTGCTGCATCCCTATCCCATAATCCCTTGCCTGGTTTGCTGCAGTCTTTTCAACAGACGCTCAGTGAGAAAAAGATGTCCTGTAAGATCAAGACCGATTGGTGTGAATACTGAAGGGGGTCTTCCACTTGTTAATGACCCAG----AAACATTCCTGCCGACTTCC---AGCCTTCTCTCATTTCCTCCATTTTTCTCTTCCTCTGTTCTGTGCATGAACTGGCACATCACTACTTAGAGCAGAAGATATGCTGGGCTTCTGATGATGGCTGCACTGCATGGTAGGGAATTTTAACCAGTCTCTTTGCATGGTGCTTCCCAACTTGAAGTGTTAGCAGAAACGTGCGTTGTTCTTTTGGATTGCCGCGTAGCTGCAGCGACAGACTTGGGAGGATTTAATTCTTTG--CCTCGTTGGTTAGTCTGTTTGTCTTCAGAAATGGGTAGGTCCTAAATGTTC-AGACTGCTTAGTATTGTGCCAGGTGGATAACTGATTTCTCCTGCTCTCTCGGTTCTTTTTTCTC--CCTTCATCTCTCATGGTGATGCTGCATCCTCTGTAGCTGTAAAATGCAGACCCATT-CTTTG-CTTAAACA--AAGGCACCAAATTAA---CAAGTATG---GGGAGAAAATCATGCAAGATTTTCTTATCAAGTTCTAAT-----GTGATCTGACTAGATTTGTATTTTTACCAGTCTTTATTTTAGTGTGT---ATCTTGGCTTGTTTTAAATAGAAGAATTTTGCCCCCTGCATCT---CTCTGTTGGGTGCAAACATGGAGATGAA--ATATTTGATTTGCAGGATTC----------CTTCCTCGCTGCCCCAGG-------GTAGAGGAGAACGTGCGACCCTCCCCCCACTCTGTCCTCTATTAGAGAATCCTGGGGTTGAGTTCCATGGCTGGCAGTTACCATTGGAAACCCATTCATTCATAATGCATGACTCGACCCTCCGAATTCTGAATGCCATTGAGGGCCAGCAAACAAACATGTAGGAGATAATTTGCTTTTTTTCTGACA-ATTTTTTTTCCTGTCTTTGAAGTACAGTCAAATCTGGGTGGAGCTCAATGATAGCATTACACAGGGAAAAGA chr4 + 94230402 20911376 20911375 20912583 20911376 20911375 20912583 1208 CTCAGCTGCACTGCCATGCCAGATGCACAGTGGTGGCTGTCTCCGCCAGCTAATCCTGTAATAACATTCTGGTGACCGAATTCAGTGGCCCTGTGTG-GAGCCTCCAAACAGCTGATTGCTGAGTAGGGAGGGAAAAAAAATCACCCAGCGAATCTCGTTGCAGCTCTCTGCTGCATCCCTATCCCACAATCCCTTGCACAATTTGCTGCAGTCTTTCC-ACGCAGGCTGAGTGAGAAAAAGATGTGCT---AAATAAAGATTGATTGGTTTGAATCCTGAA-CGGGTCTCCCACTTGTAAATGACCTGGGGGAAAAAATTCATGACGACTTCACTGGGCCTCCTCTCA-TTCTTCCATTTTTCTTTCCACCTGTCCTCTTCGTGGGATGGAGCATCATTCCTCAGAGCGCAAAATACCCTGTGCCTCTCGTACTGACCGTGCTG--TGATAGGGATCCTTTACCAAT-TTTACGCGTGA--------GCCTTGAGATATTCACAGATG-ATGTTTTACTCGTTTGGACTACTGCGGAACTGCAGCTCCATCCCTGCAAGGATTTTGTCCTCAGCACTGCACTGATTGAGCAGTTTTTCTACAAAGATGGGTAGGTCTAAAATGCTCAAGTTTGCTCAGTGTT---CCTGGTGG-----------CTGCTGCTGGGTTGCTTCTTCTATTTTGGCCCTGATTGTTCATTATGCTTCTGCAT--------GCTGTAAGAGGGAAGAGGGTTGCTGTGTTTTAAACAATAAGGCACCAAACTGATTGCAAGAGTGTGTGAGAGAGAGGAATGCAAATGTAGCTTATCGAGCCTTCTCCACCAGTTGTCTGTGTGGA----GATTCTGATTATTAATTTACATAGTGTGTTCCGTATCGGCTGATTTCGGGGTGCTGCTATAAGTACCTTGTATCTATCCTTTATTCCACAAAAGCATGAACAGGCACTATATTTGTTTTAAGGAGTTTTAAACACCAGCACCCTCAGCATTTCAAGCGACATTGTTGAGG---------------TTCCCCACCCTTTCTTACA------GCTCCCAGGCCTAACTTCCTTTGCAAAC-GTTGCCATGGGAAACCTATTCATTCATAATACATGAATAGACCCTCTGGGTTGTGAATACCATTGATAAGAGGAGGATGAACAGGCTGCAAGCAATTTGTTCTCCTCAGGCTAGACTTTCAGGCTTGT--------TGCAGTTCTGGCTGGGTGGAGTTCAGTGATAGCAGTGTATTGAAAATGGA .:.:.....::...-.:.xx::x.....--....x..:-.....x.::.:x.......:.:.x..x.........:x..::....:.....x.:::.-....x.xx..........:......x.x:.-.......:x..::......-........:.........x...................:..........x:::...............:.-..:x.x...x................x..---.:..x....::.......x.....x.....-x......:........x.......::.----...x....x..x.......x---:....:......-...:...........:.:.x:....:..x.x.:..::x...x:.....:.x..:.....:x..:...:x...x..:...x:.:x..:.:.::...--..:......x::..x....:.-.:.x:..:..:--------:x.....::.:..x:....x:-:..:x..::..x......:.:.:...x.:.......xx..xx.:..x:.......x:.:..:x.--.:x.::..:..::x.x....x...x..:.:...........:x.....:..-..x:....:...:..---..x.....-----------..x.....xxx.:.x.....:.x.:.:--..:.x..:x:....x:..x.x......--------.......:.x.x.::xxx:..-..x..-:.......--...........:.:.---....x:..---.:....:.:xx......:xx.xx......:..:::.xx:-----..x:....xx.:..----x...:.x.::.x.xx..xx:x........---:.x.:....x:...::::xx.xx.xxx.xx.:x..:..:....---..:.:..xx:::x..:....:.x.x.x.--.......x...:x:.::..:----------.x:....:x:::::..:.-------..x....---------------::......:..x..:.x:.------:x...::..x:.:.x....x.x..x::.-...:....x.......:.............:.....x.x.......:.::..x.....:.......x::xx:.x::.::....x.:x.x.:::......:.:.::.:xx.x:.-.:...:xxx.:...--------.:....:xx:x..........:...:........x.::.:x.::..x:.. 14M1I13M2I8M1I58M1D30M1I19M1I70M1D29M3D30M1D27M4I20M3I12M1D95M2D21M1D11M8D21M1D64M2I51M1I15M3D8M11D27M2I27M8D21M1I5M1I8M2I15M3I8M3I39M5I14M4D29M3I43M3I28M2I20M10I18M7I7M15D19M6D28M1D113M1I14M8D50M 780/1149 67.9% 1208/94230402 0.0% 134/1149 11.7% 132345796 57868759 +3343 chr4 + 190214555 153265161 153265160 153265259 99 TAAAAAAAAAAAGGAATAAAGTCCAATATGATGCTTTCTCTCTGCTTTTTTCAATACCCAGCATGGCTCTGATTATT------TCAAAGGGTACTATGAAAAATT chr4 + 94230402 85076362 85076361 85076466 85076362 85076361 85076466 105 TAAAGAAAGAAAGGAAAAAAAGACATTTTTAATCTCACTTCATTCTTTTTTCAGTACCCAGCATTCCCCTTACTATTCAGAAATCAGTGGATTCTAACAAAAACT ....:...:.......x...:xx..x.x.x.xx..:x..::x.x.........:..........xx.:..x.:....------...:x..:.x...xx.....:. 77M6I22M 69/99 69.7% 105/94230402 0.0% 6/99 6.1% 68188799 NA +15727 chr4 + 190214555 153270290 153270289 153270552 263 TACAGATCATTATATGTTTTTCTGTTTTGATTTTCTGTCTGACAGCA------GCAGCGTGCAGGGTCAAAGACAGCCGGCCCCCCATGTCAGTGGTCTAGGATGGCCAGTGAAGGCACCAACATCCCAAGTCCTGTGGTGCGCCAGATTGACAAGCAGTTTCTGATTTGCAGTATATGCCTGGAACGGTACAAGAATCCCAAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTAAG--CCTCCTTTGTGCTTGGAGAAGGGAGTTT chr4 + 94230402 20915691 20915690 20915961 20915691 20915690 20915961 271 TATAAAACATCTTTCTTCTCTCTTTTTTTTTTTTTTTCCTGCCACCAACTCCAGCAGTGTGCAGGGTAAAAGGAAACAGGACCCATATGTCAGTGGTCTAGGATGGCCAGTGAAGGCTCCAACATCCCAAGTCCTGTGGTCCGTCAGATTGACAAGCAGTTTCTGATTTGTAGCATATGCCTGGACCGTTACAAGAACCCCAAAGTACTTCCCTGTCTGCACACTTTTTGTGAAAGGTAAGTCCCTTCTTTGTGCTTCTAAATGGACATTT ..:.:.x...:x.x:x.:.:...x....xx....:.x:...x..x..------....:.........x....:x.:.x..x...x:...............................x......................x..:..........................:..:...........x..x........:.....:..x..:.................:..:..:.......--...:..........xx.:.x..:x:... 47M6I188M2I28M 214/263 81.4% 271/94230402 0.0% 8/263 3.0% 132354599 57859956 +17298 chr4 + 190214555 153275869 153275868 153276137 269 TCTCCACCTCTGCTTCTG----CAACAGGTGCCTGCAGAACTACATTCCTGCCCACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAAGGGGTGGCCGCGCTCCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACGCTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTGTGGCTGCGGGAAAGCCTCTCTCTTGCCCAAACCACGATGGGAATGTAAGTG chr4 + 94230402 20917928 20917927 20918200 20917928 20917927 20918200 273 TCTCCCCTTCTACCTTTCGTCCCCATAGGTGCTTACAGAATTACATTCCCGCCCATAGCTTAACCCTTTCTTGCCCCGTGTGCCGCCAGACTTCCATTCTGCCAGAGAAAGGGGTTTCTGCACTCCAGAACAACTTCTTTATCACCAACCTGATGGATGTCCTGCAACGAACACCGGAGAACAGCATTGAAGAGTCCTCCATCTTGGAGACTGTCACTGCTGTTGCTGCAGGCAAACCGCTTTCCTGCCCCAATCACGATGGAAATGTAAGTG .....x.:...:.:.:.x----.x.:......:.:.....:........:.....:..:........:..:.....x..............:.....:.....x...........xx.:..:...........:.....:.....x...........:..x.....:.....x..:.:x.:..:.::...:.....:......:.......x...........x.....:..x..:..x..:..:.....x..:........:.......... 18M4I251M 217/269 80.7% 273/94230402 0.0% 4/269 1.5% 132357941 57856614 +3083 chr4 + 190214555 153288018 153288017 153288118 101 TGTTTGAAGGATAGTTTTGCCAGATA---AAAAATTATTAGTTGTCAGGTTTATTTTTTTTTCAGCAGTTTGAATATATTACCCCATTGATTTCTGGCCTCTAT chr4 + 94230402 46808689 46808688 46808784 46808689 46808688 46808784 96 TGTTCAAAGGAT------GCCATATGTTGGAAAACAGCTGATTTTC--TTTTTTTTTTTTTGCAGCAGTTTGAGTACATAACCCCAGTCAATTCTCACCCTTAT ....::......------....x..:---:....:x::.::..x..--x...x........x...........:..:..x......x.x.x....x:..::... 12M6D8M3I17M2D56M 68/93 73.1% 96/94230402 0.0% 11/93 11.8% 106479329 83735226 +11813 chr4 + 190214555 153292948 153292947 153293148 201 CCAGAACCAGGAACTTTTCTTGTGTCATCCACAGGTGATGGAATTTTACTGCCAGTCCTGTGAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCAGAGCACCCCACAGTTCCACTCAAGGATGTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGATGCTGTCAACAAAAGGTGGGGGACCCCTCC chr4 + 94230402 20923673 20923672 20923861 20923673 20923672 20923861 189 CTAGAATTATGCACTTTTT------------CAGGTGATGGAGTTTTACTGCCGGTCTTGTGAGACAGCCATGTGCAGGGAGTGTACAGAAGGAGAACATGCAGAGCATCCCACAGTACCACTCAAGGATGTGGTAGAGCAACACAAGGCATCCCTCCAAGTTCAGTTGGATTCTGTCAACAAACGGTATGGAGTCTCCCC .:....::.x.x......:------------...........:..........:...:........x........:x.......:..:..:..:..:..:........:........x.................:..:..:........x..x.....:..:...:.....x...........x...:x..:::.:.:.. 19M12D170M 152/189 80.4% 189/94230402 0.0% 12/189 6.3% 132369275 57845280 +14407 chr4 + 190214555 153294297 153294296 153294491 195 TCCACCAGGCTCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCTGAAATCATTCATCAGTTAACCAACCAAAAGGCCAGCATCGTGGATGACATTCATTCCACCTTTGATGAGCTCCAGAAGACTTTAAATGTGCGCAAGAGTGTGCTGCTTATGGAATTGGAGGTCAACTATGGCCTCAAACACAAAGTAAGA chr4 + 94230402 20924507 20924506 20924701 20924507 20924506 20924701 195 TCCCTCAGGCTTCCAGAGATCGACTCAGCACTTCACTTTATATCTGAAATCATACACCAGTTAACCAACCAAAAGGCTAGCATTGTAGACGACATTCATTCCACTTTTGATGAACTCCAGAAGACTTTAAACGTGCGAAAGAGTGTGCTGCTTATGGAACTGGAAGTGAATTATGGCCTTAAACACAAAGTAAGA ...x:......:.....:..x..:..x..x.....x..:..x...........x..:....................:.....:..:..:..............:........:.................:.....x.....................:....:..x..:........:............... 195M 169/195 86.7% 195/94230402 0.0% 0/195 0.0% 132369790 57844765 +48872 chr4 + 190214555 153295309 153295308 153296057 749 GCAGGTCCTCCAGTCGCAGCTGGATACTCTGCTCCAGGGGCAGGAGAGCATTAAGAGCTGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCGAGGTCCTACTGGTGAAGAAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCGCGGGAGAACGACCAGCTGGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCCATCCACAACCTCGGGACGATCTTAACCACCAACGCCGTTGCCTCAGAGACAGTGGCCACGGGCGAGGGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTCACCATCACCACCAAGGACAAAGACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACCGCCGAACTGAGCACCCCCGACGGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATGAGTTTTTGTACACTGTCCAGAAGGAAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCACATCCGAGGCAGCCCGTTTAAGCTGAAAGTGATCCGATCCGCTGATGTGTCTCCCACCACAGAAGGCGTGAAGAGGCGCGTTAAGTCCCCGGGGAGCGGCCACGTCAAGCAGAAAGCTGTGAAAAGACCCGCAAGCATGTACAGCACTGGAAAACGAAAAGAGAATCCCATCGAAGACGATTTGATCTTTCGAGTGGGTAAGGAGAGGGCTTCTGTGC chr4 + 94230402 20927740 20927739 20928484 20927740 20927739 20928484 745 GCAGGTTCTCCAAACCCAGCTGGATACCTTACTTGAAGGACAAGAGAGCATTAAGAGTTGCAGCAACTTTACAGCCCAAGCCCTCAACCATGGCACTGAAACTGAAGTGCTGCTGGTGAAGAAGCAGATGAGTGACAAGCTGAATGAACTAGCTGAGCAGGATTTCCCCTTGCAGCCCCGTGAAAATGATCAGTTGGACTTCATAGTGGAAACAGAAGGCCTGAAAAAGTCCATTCACAATTTGGGCACTATTTTAACCACCAATGCTGTTGCCTCTGAAACAGTTGCCACAGGTGAGGGACTACGGCAGACTGTGATTGGACAGCCCATGTCTGTTACCATCACCACCAAGGACAAAGATGGGGAGCTCTGTAAGTCCGGGAATGCTTACCTCACTGCTGAGCTGAGCACGCCTGATGGAAGTGTAGCAGATGGAGAAATACTTGACAATAAAAATGGCACTTATGAATTTTTGTATACTGTTCAGAAAGAAGGGGATTTCACTTTGTCACTGAGACTTTATGATCAACACATCAAGGGCAGCCCATTTAAACTGAAAGTGGTCAGATCAGCAGATGTATCCCCTACCACTGAGGGGGTTAAGAGACGTGTTAAATCTCCTGGCAGTGGTCATGTAAAGCAGAAAGCTGTGAAAAGACCTGCGAGCATGTACAGCACTGGAAAAAGAAAAGAGAATCCCATTGAAGATGATTTGATCTTCAGAGTAGGT----AGGTGACTTCTCTGC ......:.....:x.x...........::.:..:x.:..:..:..............:...........:.....x..:.................x..:..:..:..x..:....................:..x........:..:..:..:..x.....:...........x..x..x..:..:..:...:....:.....x........x..:..x.....:........:.....::.x..x..x..:...........:..:........x..:.....x.....:..:.....:..:........::.x..:..:...........:..:.......................:..x.....x..:..:x....x..:..:........:..:..:........x..:..:..:..:..:.....:..:..:..x..x.....:..:..:.....:.....:........:.....:.....:........:..:..::....x........:.....:..:......x::........:.....:.........:..x....x..x.....:..:..:.....x..:..x..x.....:..:.....:..:..x..x..:..:..:..x.......................:..:.....................x................:.....:...........:x....:...----..:x.:.....x... 730M4D15M 602/745 80.8% 745/94230402 0.0% 4/745 0.5% 132367569 57846986 +3073 chr4 + 190214555 153299339 153299338 153299375 37 CATTGTGTGTGTATGTGTATATATATATATACACACA chr4 + 94230402 83331410 83331409 83331446 83331410 83331409 83331446 37 CATTATGTGTGTATATGTGTATATATATATACACACA ....:.........:...:.................. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 69967929 NA +3312 chr4 + 190214555 153303333 153303332 153303402 70 CATGGTGGCACGCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x....:.:........:..::........x.xx.x...x.:..x........:.. 9M2D59M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 77270136 NA +3109 chr4 + 190214555 153306183 153306182 153306260 78 AGCCATATGACTTAGGGGAAATTATTTAACCTCTCTGTGCCTTAGTTTCTTTATCTGTAAAATGGGAATGATATTAAT chr4 + 94230402 79037110 79037109 79037187 79037110 79037109 79037187 78 AGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAATGAT ...::......:.x:.....:......x.::.x....x.::.:.:..:..::.xx.:.......x.:.x:...x.:.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 74269073 NA +3098 chr4 + 190214555 153314280 153314279 153314362 83 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 77281083 NA +9563 chr4 + 190214555 153315452 153315451 153315592 141 GCTTAATTTTTATGATTTTATCATTTATTTTAGGTACCAAAGGAAGAAATAAAGGAGAGTTTACAAATCTTCAGGGGGTAGCTGCATCTACAAATGGAAAGATATTAATTGCAGACAGTAACAACCAATGTGTGCAGGTAT chr4 + 94230402 20935853 20935852 20935992 20935853 20935852 20935992 140 GCCTGATTTATGTG-CTTTGTGTTCAATTTTAGGCACCAAAGGAAGAAACAAAGGGGAATTTACAAATCTTCAAGGTGTAGCTGCATCTACAAATGGAAAAATATTAATAGCAGACAGCAACAACCAGTGTGTACAGGTAT ..:.:....x.:..-:...:.xx.:x........:..............:.....:..:..............:..x.......................:........x........:........:.....:....... 14M1D126M 119/140 85.0% 140/94230402 0.0% 1/140 0.7% 132379599 57834956 +13141 chr4 + 190214555 153315809 153315808 153316015 207 AATGAATGTAATTTATCTTACAGATATTTTCCAATGATGGCCAGTTCAAAAGTCGTTTTGGCATACGGGGACGCTCTCCGGGGCAGCTGCAGCGGCCCACAGGAGTGGCTGTACATCCCAGTGGGGACATAATCATTGCCGATTATGATAATAAATGGGTCAGCATTTTCTCCTCCGATGGGAAATTTAAGGTAAGATTAACTACTA chr4 + 94230402 20937246 20937245 20937447 20937246 20937245 20937447 202 AACTAATGT--TTTCTGTTACAGATATTTTCCAATGATGGCCACTTCAAAAGTCGCTTTGGCATAAGAGGAAGGTCTCCTGGCCAGTTGCAGCGGCCAACAGGAGTGGCTGTGCATCCCAGTGGTGACATCATTATTGCAGATTATGACAACAAATGGGTTAGCATATTCTCATCGGATGGAAAATTTAAGGT---ATTAGTTACCA ..:x.....--...x.x..........................x...........:.........x.:...x.x.....x..x...:..........x..............:...........x.....x..:.....x........:..:........:.....x.....x..x.....:...........---....::...:. 9M2D182M3D11M 173/202 85.6% 202/94230402 0.0% 5/202 2.5% 132378563 57835992 +3401 chr4 + 190214555 153317836 153317835 153317902 67 TGTAGTCCCAGCCACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGAAGTTAGAGGCTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......:.....:.....::........x:xx.x.:.x::.....:........:.xx:.....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 77284625 NA +17923 chr4 + 190214555 153322646 153322645 153322907 262 AGACAAAAATTGGATCAGGAAAGCTGATGGGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTTGTGGACAACAAGGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGTAGCCGAGGAAATGGGGACAGGCAGTTTGCAGGTACACTCGATGGTAATATGTAAACCCCCTTTTTTATGCTTCTTCTGCTCACATTTGCATGATGTTGGAGCATGTTGAAGACACCGCATCC chr4 + 94230402 20943216 20943215 20943476 20943216 20943215 20943476 261 AGGCCAAAATTGGATCTGGAAAACTCATGGGCCCAAAAGGCATTTCTGTGGATCGCAATGGACACATCATTGTAGTGGATAATAAAGCTTGCTGTGTGTTCATCTTTCAGCCAAATGGGAAAATAGTCACAAGGTTCGGTAGCCGAGGGAACGGTGACAAGCAGTTTGCAGGTACACTTGATGGTAATATGTAAACCTCCTCTTCT-TGACTCTTCTGCTTACATTTGCATGATATCTGAGCATGTTGAAGATGCTATACCC ..:.x...........x.....:..x.....x..x.....x:..........:........:.....:.....x.....:..:..:..x.....:.....:.....:........:..............x.....:...........:..:..x....:..................:..................:...:..:.-..x:.........:.............:.:x..............::.:::.:.. 206M1D55M 218/261 83.5% 261/94230402 0.0% 1/261 0.4% 132379430 57835125 +7925 chr4 + 190214555 153324037 153324036 153324203 167 TTGTTGTAGTCATCACATATTTTTTTCCATCTTTATTGCAGGTCCCCATTTTGCAGCTGTAAATAGCAATAATGAGATTATTATTACAGATTTCCATAATCATTCTGTCAAGGTACTACAAGCACATGAGTTGTTGTTAACTTTTAACTGC--TTTTATGGAGAAATTG chr4 + 94230402 20944524 20944523 20944692 20944524 20944523 20944692 169 TTGTTATTTCTATTATGATTCTTTCTTCTTCTGTATTGCAGGTCCTCATTTTGCAGCTGTAAACAGCAACAATGAAATTATTGTTACAGATTTTCATAACCATTCTGTCAAGGTACAATTAGTAATAGCAATTTTGGAAGCTTTTTATTTTTATTTCCTGGGGAAAATG .....:.xx::..:.::xx.:...:.:.x...x............:.................:.....:.....:......:..........:.....:................x.:x..:.xxx.x:x.x...xx.:.....x.:.x:--...:x...:....x.. 151M2I16M 123/167 73.7% 169/94230402 0.0% 2/167 1.2% 132379513 57835042 +10507 chr4 + 190214555 153328525 153328524 153328675 151 TACAGGTGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGGAAATGGGCAGTTTAATGCTCCAACAGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTGGGGAAACAGCAGGATCCAGGTAGA chr4 + 94230402 20947606 20947605 20947756 20947606 20947605 20947756 151 TATAGGTATTTAACCAGGAGGGAGAATTCATACTGAAGTTTGGATCGAATGGAGAAGGAAATGGACAGTTTAATGCACCAACTGGTGTTGCTGTAGACTCTAATGGAAATATTATTGTAGCAGATTGGGGAAACAGCCGAATACAGGTAGA ..:....:.....:.....:...........::..........x..:.................:...........x.....x.....x..x..:..:..x........:..:.....:..x..:............x.:..x........ 151M 127/151 84.1% 151/94230402 0.0% 0/151 0.0% 132380919 57833636 +3766 chr4 + 190214555 153332514 153332513 153332587 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAAGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x...............:x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 77299310 NA +22051 chr4 + 190214555 153334772 153334771 153336002 1231 ATAACTTCTCCTATAACATTCTGACTTCCTATTTGTTTACAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGACCCACTCTATGGCCCCCAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGACTCTGGAAATCACTGTTTCAAAGTCTATCGATACTTACAGTAATGGTGGGC-----AGGTGGATA-----CCCGCTTC---CATGGTCTTGCACTATAAACTGGAATGGATTTCTCAATGCGGGACCAGATTATGACTAGAGTT--TTTATGCCA--GAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGAATGTAACA--ATTTCCTTAAAAATGACTTATCCAAT-TTCTGTATTTCACCTTT-------AGGGTTAA-----AAAAAACTCTTCTACTGAATCTATAAAAACTGCAGTTTTACATCTGTGAACTATGGCTTAAGGGACAGGATTTATGTAGCTAAACTAATTTTGCAAATCAAACAGACACTTAAAAAACTAG-----CATATGTAAAGGTATTCGTTAATCCTGTGAATGGTAGCTTTTGCACAGAACTTCCAAAAGCAAAACAAAAACAAAATCTATTGTAGTTATATACTTCATTTAACCTAGGTCACAAGACCCAGGGAATCTTCTA-ACCTCACTTTTACAGTAGGTATTACTCTTGTGACATTTT----TTTGGTTATCAACAACTAAATATAAATTACTTTGGAAAAAGTAAGGCT--GTCTTGCAAAATGATCCCAGCTCTGATTAGCAGCCCT--------CTGGAGTTCAGAACT-TAAGTATCAGTGCAAATTTCTCAACCTTTCTGGGTTAGACAAAGATCCTTTTTTGTGTGTTCTTTTCACCACCCCTTTGGCTCACCTTGTATCAGCAAACAAAGTACTTCTTCAGGGAAACCTGAAATTTCTAATGC-CTTGAAAAGCATATTACAAAAGTAATGCTACCTTTTGGGAAAC------------AAACTGCCCCGTTAACTCCAGATCATTGCACTGGAA----------TGTAA--TCAAGAAAGTTAGTCATGTTTTATGTACCATGTTTTCACACGTGTCTCTTCTCTTCGACTTCCTGAAAGCGAAAGCTTTACCTCCTGCAAATGTCAGCACATGTAGTAGGACACCAGTATCCTAGGACAGAGAGCCATAAGTAGCCCTTTGGAGGACTGATGGTGT-CAACCAAAGGCA-TGTGATTGATTAATGATTCCCCCTTAGAAAG-CAAGTGTTACCAAAGTTGT chr4 + 94230402 20948707 20948706 20949917 20948707 20948706 20949917 1211 ATAACATTTCTTATG-------TGCTTTCT-CTTATCTGAAGGTTTTTGATGGAAGCGGATCATTTTTATCCTACATTAACACCTCTGCTGACCCACTTTATGGCCCCCAAGGTCTGGCCCTTACTTCAGATGGCCACGTTGTAGTTGCAGACTCTGGAAATCACTGCTTCAAGGTCTATCGATACTTACAGTAACAGTGAGCTCTGTAGCTGAATAATTATCCAGCTTTAAGCAAAGACTGGTCCCAGAGA-------------TCCAAGGCAGGA-TATCTCCTACTTTGAGTTCATTTTTAACAATGAAAGAGTCTATTATGAACTTCTTATGTTAATTTCCAAACTTAACCTTGTTTACATAGAAATTGCACCTCTTACGTTCCTCACTGAACTTTTTGTTTTAAGGGTTAATACACAGAATCCTCTTTAACTGAATTCATAAAGACAACATGATATTAAACAAAAACTGCAACTTATGGAACTGCAATTAACTAGTTAGACAA-------AAATGAG----------AAAAAACTGGGGAAAAATCCCCAAAGCTTTTTG--AAGACTGTGAAGGGTAGCTCCCATTCAGAGCTTCCAAATTTGAAG-------AAGTGTCATTGT-----TATACATTATTTCACCCAA---AGGTGATCCTGGGAATCTTCTAGATCTTGTTTTCATGGTAGGTATTACACTTTTAACATTCTTAAGTCTTACTATCTGTAAC---AAGTAGGTCCTTTTAGTA----TAAAGTTCAGTCACACAAAATTGATCTAGTTCAAACTGTCAGATCTAACTCAGCTCAACATTCAGCACTATGAGAATCAATGCAAATTTCCTACTCGTGTGGGATTAATGAAGAAT--TTTTTCATGTACT-TGTTCACTCTTTCTCTTGCTCA--TTGTGCTGG------AAGGACTTTGC---AGAAAACTGATGTTTCTAAAGCTCTGGAAAAGCTT-----AACTGTAGTGATATGTTAGTGAGAGCTGAATTTCTGCACAACAGACCTTTTGACACCAAACTAGTTCATTGAGATCAGGGTTATTGCAATGTCAACTCAATTAACCACA---TGCGTGCCACCCTTTCGTATATGTTCATTGCCAC--ATTTCCTTAAGGCAA----CTCATTGTATTAACAAATAAGAAAATGCAGCATCACA-CAGAAACGAAAGCCAGAGAG------GTACCCCTATGGAGGACCTACATTATACAACAAAAGGAACTGTGGTAAACAGAGGTTG---TATAAGAAAGCCAAGGGTTACCAAAGCTAT .....x.:..:...:-------x:...:..-:..:.:.:x.............:..:...........:..............x..............:..............:........x...........:..:.....:.......................:.....:.....................::...:..-----..x..:...-----..x....:---..x:.x..x.:x.:.x.:.-------------::...x..:...-:.xx.:x.:x:.x.....--...x.:x..--...:..:..xx.x:.......:::.x.x.x.....::..:x....x--:...x.x..:....x:.x:x..:x.:-...:x:.:.xx..:...-------........-----.:..xx.....:x.......::.....:..x:..xxx.xx:.xx::x:....::::....x..:..x.x.x...xx...:..:..x.-------....x.:----------........:.-----x..x:x:....x.x..:.--..xx.......x.......:::::x....:........xx::..:-------..:xx::.....-----.....x.:....x...:.:---.x:x..:..x............-.:..:::...:.::...........x...x.:.....:.----.:.x::....x::...---.x:..::.:x:...:.x.----...:.:.--...x::......x:x:.:..:..x:.:.:x...x:..--------::::x:.....x...-.:..x....:..........::.x:.x.x:x..:...:xx..::..--.....::...::.-.x.....:x:::..:.x.....--....::::.------...x....:x:---:....x....x:.......x..-..x.......x.-----..xx...:..x..:x..xxx.::.:.------------x...x.x..:x..:..x...:.::.x.x..:..::.----------..:..--....xxx.:...::..::---.::..:...:x:....::.::...::x..x:.x:--.:.....x..:..:.----:.:.::x:x.xx.x.x:.x..x.x...:..:.xx...-...x.x.xx.:.x.......------...x....x........:x.::x.:.-....x.....x.-....:.x:.:x:.x.x.x---:x.x......-....x..........:.:. 15M7D8M1D172M5I9M5I8M3I19M13D12M1D18M2I9M2I46M2I26M1I17M7I8M5I87M7D7M10D10M5I18M2D45M7D12M5D19M3D22M1I39M4I16M3D18M4D7M2I37M8I15M1I46M2D13M1D22M2D9M6D11M3D22M1I12M5D26M12I36M10I5M2I18M3D34M2D15M4D37M1D20M6D26M1I12M1I18M3D10M1I19M 758/1130 67.1% 1211/94230402 0.0% 182/1130 16.1% 132386065 57828490 +22759 chr4 + 190214555 153338425 153338424 153339351 927 GTAGGAAAAAATGAAAGCTATTTCATGCAAA-CATT-ATCTAATTTAGCTTAAAAGTGAA--AGTGGTAA-TACTGTT-GGTTTCTGTAAATGTTGCAGGGTTTTAAACTTTATAATTACTTTAATATTTTTGATAACTAGAAATCTAGTATTGCCATAA--AGGAAACTAAGTGCCCATCAAAGATTTGTTTGGTATAAATAAAGAATTATTTGTTTTGTTTTCAATGACAGTAAGCTAC-AAATCATGATGC---TTAAAAACTTTCTAAAGATGAATTGTGTGGCAGTGATTGGT-----CTGTTTGTGGAGAATGTATGAAAGCTATTAATATTCTAGAATAGATTAATAA---ATTGGCTATGTT-GTTCCAATGAATGTACAGCACTTCCATTAACTTTTGAAAGCAACACAGCCTTAAACTCAA-------TGCTTTTGCTTTATGACATGGGAATGTTCTGTCATCAATGGAGTGTATTCTTGTAATAGAATTCTTTATATCGTTCTCAATT------CTATAGACTTTCAAGCCTATGTATGAATATGAAGGGGTTTTTTTTTTTTGCTTTGTTTTCTTTTTAGATTTT-GTACATTCCATCTTTATAGGTCTGTTTCATATGTTTTATGTATAGAACACTAAGTCTTGCACTCTC-TGACATTGATACTGATATATTCTCGTCATTTG----------------------TTCTTT---------TATGAATCAAAATGTTGAC--TGCCTATTTAAAGAAAAGAATGAACGCTGTGCATCAAAGTGTTTGTATGT--------TCGTAGCTACATACGTACCACAGTATTTTGGATGCTTTAGTCTACAATGAAACTTTCAATTAATTCTGTCTT-GAAACATAGGAGAAACAGGATTCATGTGTATCTCTTTACCATGCAC-AAAATCTCAAATCATTATAATAAAGCTTGTTTTCTCCATT--TGCAGAGTGAATATTTATTTATTTAATATTTC chr4 + 94230402 20952230 20952229 20953195 20952230 20952229 20953195 966 GTGTAAGAAAAGGAAAATAGTTTGAGGCAAAGCATTTGTCTAATGTAGATGGAGAGTTAGTTATTAGTAAATGCTCTTCTGGTTCTGTAAAAGCTAGAGGCTTTTCAATTTTA------CGTCAATGTTCTTTACAGTTAAGGATCTAGTGTTGCCATAATAAGGACTGTAAGTGCCCAATAT-GTTGTGTTTGTTATGAA----GAATTGACT-TCCAGCTGTGGGTGACAGCTAGTTACGAAATCATGATGTACATTGACAATTTTCTCAA--TGAACTGTG-AGCGGTGATTGTTTCGGACTGTTGGTGGAGAGTATGAGAAAGGTATTTGTGCTACAGGATAGGAAGGTTCCTCACTGGTTGTGTTCTTTCTGATGAATGTACAGCACTTCGGTTGATGTCTGTGAGCAACACGGCCTTAACCCTAAAACTTTTTGCTTTGGCTTTATGACATGGGAATGTTCCCTAAACTGCACAGCGTATGGCAGTATCGCCACATTAGACATCTCTACCCATTGATACACTGCAGCTTTCCAGTTCCA---------------AGACTCTGTCTTTCCTCTTCATTTTTTTTAAAGCTTTTTGTACATTCCACCTTTTTAAGTCAGTTTCATATGTTTTGTGTACATG----TAAGTCTTGCACTCTCTTGAAACTTATGATGAAATACTATCCTCACCTGGTTTTGTTTCATTGTTTTTACTTTCTTTTTAAATTCCTGTGAGGCTATATACAAACTTTGTCTCCTTAACATTGAGTATGAAAGATGAACATCAAAGTGTTTGTGTGTGTATATAGTTTTAGCTTCCTGTGTGCCACGGCATTCTTAATGCTTTAGCAGATGGTAGAAATAAAAAGT-ACTCTGCCTTGGAAATGTAGGAAAATCAG---TCAAATGTGTACTTTTACCACGCACAAAAATTTCAAATAATAAAAATAAAGCTTGTTTCCTCTGTTACTGT----TGAGAATTTATTTTTCATGTATTTC ..:x:.:....x....::x:...x.x.....-....-:......x...x.x:.:...x.:--.x.:....-.:..x..-x.x.........x.:.:x...x....x..:....------.x.:...:..:..x.:.::..:::.......:.........--....xxx..........x:.x-.x.x......x...:..----.....:x:.-.::x.:.x.x::......:x..:...-...........:---..:.x..:.....x..--....:....-:..:.......x.-----.....x.......:.:.:x.....x....x:.::.x:..:....:xx::.xx---.:...:.:....-x...::..................x:..:.:x.:..x:........:.......x.::..-------......x......................:x.x.x.x:::x..:....xx:x...x::xx.:x:.xx.:...x:.x:.x...------..::..x:..:..:x:.:.---------------:.::.:.x.:...::x...::....:...xx..x....-..........:....x..:...x..............:....:.x:----................-...x.:.x..:x...x...:.x..x...::..----------------------......---------.:...:x.x.x..::x:..--..:..x:....x:xx:..x.....x.x..x:...............:...--------.:x.....x.x.::..:....:.:...:.x:.........:xx.:::.::..x.xxx..x.-.:....:...-....::.....:..x...---...x:...:.x::.......:....-.....:......x..x.x..............:...::..--..:----...:x........x.:xx:...... 31M1I4M1I23M2I8M1I7M1I34M6D41M2I21M1D17M4D9M1D26M1I12M3I16M2D9M1D13M5I52M3I12M1I60M7I82M6I19M15D38M1I46M4D16M1I32M22I6M9I19M2I50M8I61M1D10M1I18M3D25M1I40M2I3M4D25M 620/885 70.1% 966/94230402 0.0% 123/885 13.9% 132386195 57828360 +5783 chr4 + 190214555 153350036 153350035 153350135 100 TGTTTACTTGTTAATTTTTTTGCTTTAGTCAAAGAAAAAAGGACTGAGTGCAGAAGAAAAGAGAACTCGCATGATGGAAATATTTTCTGAAACAGTAAGT chr4 + 94230402 20956483 20956482 20956577 20956483 20956482 20956577 95 TGTTTGTTT-----TTCTCTTGTTCTAGTCCAAGAAAAAAGGACTGAGCTTTGAGGAGAAGAGAGCTCGCATGATGGAGATCTTTTTTGAAACAGTGAGT .....::..-----..:.:...:.:.....x.................:x:x..:..:......:.............:..x....:.........:... 9M5D86M 77/95 81.1% 95/94230402 0.0% 5/95 5.3% 132393553 57821002 +3012 chr4 + 190214555 153354473 153354472 153354508 36 TGGTTTTTTGTTATTGTTTTTGTTTTGTTTTGTTTT chr4 + 94230402 6932966 6932965 6933001 6932966 6932965 6933001 36 TGGTTTTTTGTGGTTGTTTTTGTTTTGTTTTGTTTT ...........x:....................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 146421507 43793048 +4633 chr4 + 190214555 153355645 153355644 153355717 73 TTTAAACAGAAAGATGTATTTCAATTAAAAGACTTGGAGAAGATTGCTCCCAAAGAGAAAGGCATTAGTAAGT chr4 + 94230402 20957306 20957305 20957378 20957306 20957305 20957378 73 TTTATGCAGAAAGATGTGTTCCAGTTGAAGGATATAGAGAAGATTGCTTCAAAAGACAAAGGGATTAGTAAGT ....x:...........:..:..:..:..:..:x.:............:.x.....x.....x.......... 73M 59/73 80.8% 73/94230402 0.0% 0/73 0.0% 132398339 57816216 +10002 chr4 + 190214555 153358463 153358462 153358626 164 TTGTCTCT--TAGCTGCTATGTCAGTAAAAGAAGTCCTTCAAAGCTTAGTTGATGATGGTATGGTTGACTGTGAGAGGATCGGAACTTCTAATTATTATTGGGCTTTTCCAAGTAAAGCTCTTCATGCAAGGAAACATAAGTTGGAGGTTCTGGAATCTCAGGTAA chr4 + 94230402 20959154 20959153 20959319 20959154 20959153 20959319 166 TTGTTTCTACTAGCTTCCATGTCGGTCAAAGAGGTTCTGCAAAGCTTAGTTGATGATGGCATGGTGGACACTGACAGAATCGGAACTTCCAATTACTTCTGGGCTTTCCCAAGTAAAGCTCTTCATGCCAGGAAGCGTAAATTAGAAGAATTGCAGACTCAGGTAA ....:...--.....x.:.....:..x.....:..:..x....................:.....x...xx...x..:...........:.....:.x:........:....................x.....:.:...:..:..:.xx:..x.:x......... 8M2I156M 133/164 81.1% 166/94230402 0.0% 2/164 1.2% 132399309 57815246 +3329 chr4 + 190214555 153360546 153360545 153360655 110 AAGTAACTGTATTTTAGT---ATAATTTACTTCTTTTCTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATACACATAAAAATACACACATATATACACAAAAATATAT chr4 + 94230402 39937138 39937137 39937249 39937138 39937137 39937249 112 AGGTAAGTGCCTTTTAACCTGATAATTTGGGT-TTTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .:....x..:x.....::---.......:xx.-...x..:...:.:.......::...x.......:xxx.x..:.:..xxxx.x.:...:...........:.:.x:.::.. 18M3I11M1D80M 73/109 67.0% 112/94230402 0.0% 4/109 3.7% 113423408 76791147 +3650 chr4 + 190214555 153360553 153360552 153360655 103 TGTATTTTAGTATAATTTACTTCTTTTCTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATACACATAAAAATACACACATATATACACAAAAATATAT chr4 + 94230402 85834517 85834516 85834615 85834517 85834516 85834615 99 TGTAGTTTGG----GTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ....x...:.----:...x:.x:.:x.:...:.x.................:.xx..:..x::.....:..:x.......:::x...::.....x.x.:.:.. 10M4D89M 67/99 67.7% 99/94230402 0.0% 4/99 4.0% 67526036 NA +3542 chr4 + 190214555 153360561 153360560 153360659 99 AGTATAATTTACTTCTTTTCTGTATGTGTGTGTGTGTGTGTGTGTGTATAT--ATATATACACATAAAAATACACACATATATACACAAAAATATATAAAT chr4 + 94230402 85834515 85834514 85834615 85834515 85834514 85834615 101 AATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.:..:...:xx.:....x.x:..x.....x...............:...--..:..x:..:.:.x.x:..x.:....:.x..::..x.x...:.:.x.. 51M2I48M 67/99 67.7% 101/94230402 0.0% 2/99 2.0% 67526046 NA +3381 chr4 + 190214555 153360568 153360567 153360644 77 TTTACTTCTTTTCTGTATGTGTGTGTGTGTGTGTGT--------GTGTATATATATATACACATAAAAATACACACATATATACA chr4 + 94230402 85834530 85834529 85834614 85834530 85834529 85834614 85 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...xx...x...x...x.................:.--------.::..:....:..x.:....:xxx..:........:.:... 36M8I41M 58/77 75.3% 85/94230402 0.0% 8/77 10.4% 67526038 NA +3234 chr4 + 190214555 153360573 153360572 153360656 84 TTCTTTTCTGTATGTGTGTGTGTGTGTGTGTGTGTAT--ATATATATACACATAAAAATACACACATATATACACAAAAATATATA chr4 + 94230402 85834529 85834528 85834614 85834529 85834528 85834614 86 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..:..x.:::.x.....x...................--..:..x::.:.....x:x.x.:...::.x...:....x.x.:.:.:. 37M2I47M 58/84 69.0% 86/94230402 0.0% 2/84 2.4% 67526044 NA +3244 chr4 + 190214555 153360582 153360581 153360673 92 GTATGTGTGTGTGTGTGTGTGTGTGTATATATATATACACATAAAAATACACACATATATACACAAAAATATATA-------AATATTTTTATATAAAT chr4 + 94230402 79265519 79265518 79265605 79265519 79265518 79265605 87 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGT------------GTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAAT ..:..........::........xx.:......:......:.------------:.::.:..:....x....x.:-------..:.::.:......... 42M12D21M7I17M 60/80 75.0% 87/94230402 0.0% 19/80 23.8% 74095063 NA +3002 chr4 + 190214555 153360589 153360588 153360627 39 TGTGTGTGTGTGTGTGTGTATATATATATACACATAAAA chr4 + 94230402 83331413 83331412 83331451 83331413 83331412 83331451 39 TATGTGTGTATATGTGTATATATATATACACACATAAAA .:.......:.:.....:..........:.......... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 70029176 NA +3151 chr4 + 190214555 153360732 153360731 153360785 54 TGTGTGTATATGTATATACACATATATACACACATATACATATACACATATATA chr4 + 94230402 68837096 68837095 68837149 68837096 68837095 68837149 54 TGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA ....:..:.:...:.:......:.x.....:.....:....::......x.x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 84523636 NA +3311 chr4 + 190214555 153379273 153379272 153379351 79 GAGCGAGACTCTGTC---TCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAACCACAAAAGCT chr4 + 94230402 50244251 50244250 50244331 50244251 50244250 50244331 81 GAGTGTGAC-CTGTCAGTTCCAGAAGAAGAGAGAGTATGAAAAAGAAAAGGAAAAAAAAAAATAAAAGCAACCACCAAACCT ...:.x...-.....---..x.:..:..:.:.:.:x.x...:.....:.:.....:......x.....x......x...x.. 9M1D5M3I64M 59/78 75.6% 81/94230402 0.0% 4/78 5.1% 103135022 87079533 +3038 chr4 + 190214555 153379286 153379285 153379349 64 TCTCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAACCACAAAAG chr4 + 94230402 83510351 83510350 83510414 83510351 83510350 83510414 64 TCTCAAAAAAAAAAAAAAAATAGAAGCAGTAGTACATGTGGAAAAAAAAAACTAGTTAAAAAAG ...................:x.....x..x..x.x.x:x.:..........xx.:::.x..... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 69868935 NA +3282 chr4 + 190214555 153379289 153379288 153379366 78 CAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAACCACAAAAGCTACATATTCTATTTTA chr4 + 94230402 44508580 44508579 44508655 44508580 44508579 44508655 76 CAAACAAAGAAAAAAAGAC--ATGAGGAGAGGAGAAGGAAAAAAAAAAGGATTCAAATAACCTATATGTCTCATTGTA ....x...:.........x--.x:..:...:..:...:...........:.x:..x.x..x...:..:.:::...x.. 19M2D57M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 108870709 81343846 +3113 chr4 + 190214555 153381663 153381662 153381708 46 ATATAATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 + 94230402 24792619 24792618 24792664 24792619 24792618 24792664 46 ATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ..:...x...................x:.x......x......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 128589044 61625511 +3017 chr4 + 190214555 153381672 153381671 153381710 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 128589046 61625509 +3147 chr4 + 190214555 153384432 153384431 153384489 58 GCTAATGTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTC--AGAGATAGGGTCTT chr4 + 94230402 37569636 37569635 37569695 37569636 37569635 37569695 60 GCTGAGGTTTGGTTTTCTTTTTTTCTTTTTCTTTTTTCCCTGTCTGAGAGATAAGTCCTT ...:.x....::....:.......:.....:......:::....--.......:.x:... 44M2I14M 45/58 77.6% 60/94230402 0.0% 2/58 3.4% 115814796 74399759 +3031 chr4 + 190214555 153390889 153390888 153390950 62 ATGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTATATAAAA chr4 + 94230402 3414930 3414929 3414991 3414930 3414929 3414991 62 ATGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACAAGA ...x.....:x.:......::.....x.:........::::xx..:......::...:..:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 149975959 40238596 +3175 chr4 + 190214555 153391039 153391038 153391103 65 AAATGTTATGCTAAAATATGTATTTTTTTAATTGGAAAAAATTATTTACTCCTAAATTTAAATGT chr4 + 94230402 65126839 65126838 65126903 65126839 65126838 65126903 65 AAATATTCTGTTCAAATATATATTTTTTTAACTGGAAAAATTAGTATGTTAGTAAATGTGGATGT ....:..x..:.x......:...........:........x.x:.x.::.xx.....x.::.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 88264200 NA +6152 chr4 + 190214555 153397216 153397215 153397393 178 CAGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAAAAATACAAAGACTGTGATCCGCAAGTTGTGGAAGAAATACGTAAGT------TTGTGTCATACCTTAGGGATCTTTAACTTTGATAATGAAGAAGACTTTATTTTT chr4 + 94230402 20973986 20973985 20974157 20973986 20973985 20974157 172 CAGGCAGAACGTGCAGCTCTGATGAAGGAACTTGCTGCCCTCCAGCAGAAAAAAGAGCAGCTAAAGGCAGAAATAGAAAAATACAAGGAATATGATCCAGACGTTGTTGAAGAAATGCGTAAGTTAAATGTTGTTTAA------AGTGAACTTTTACTT------AGGAGAAGTCTGCACTTTT ....x...:..x:.x:xx..::::..:..:...x..x.x..:.::x.xx...::..:...............:.............:..x.:......:x.x.....x........:.......------....x.x.------..x..x....x....------x.:.....x..x:.:.... 124M6I8M6D15M6D19M 120/166 72.3% 172/94230402 0.0% 18/166 10.8% 132423230 57791325 +3177 chr4 + 190214555 153399871 153399870 153399907 37 TTTCTGTTTTTTCAGTGAGATTTTTTTTTTTTTTTTT chr4 + 94230402 45455204 45455203 45455240 45455204 45455203 45455240 37 TTTCTGTTTTTTCAGTGGGGTTTTTTTTTTTTTTTTT .................:.:................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 107944667 82269888 +4634 chr4 + 190214555 153408942 153408941 153409022 81 TTCATTTTATATATATAATTTTTTTTCAGGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGGTATGTA chr4 + 94230402 20993951 20993950 20994031 20993951 20993950 20994031 81 TTTTTTTTTTATTTTTCCCCCTCTTTCAGGCCAAACAAGCAAAGTAGCCAAGGAGGCAGCCAACAGATGGACTGGTGTGTA ..:x....x...x.x.xx:::.:...........:...::...........:..:..x..:...............:.... 81M 62/81 76.5% 81/94230402 0.0% 0/81 0.0% 132414991 57799564 +7816 chr4 + 190214555 153414732 153414731 153414856 125 TTCTCAATTTTCTTTATAGATAACATATTCGCAATAAAATCTTGGGCCAAAAGAAAATTTGGGTTTGAAGAAAATAAAATTGATAGAACTTTTGGAATTCCAGAAGACTTTGACTACATAGACTA chr4 + 94230402 20994775 20994774 20994899 20994775 20994774 20994899 125 TTTTCCATTCTGTTCACAGATAACATCTTTGCAATAAAGTCCTGGGCCAAGCGTAAATTTGGATTTGAAGAGAGCAGAATTGACAAAAGTTTTGGAATCCCAGAAGATTTTGATTACATTGATTA ..:..x...:.x..:.:.........x..:........:..:........:x.x........:........:.::.:......:.:..x.........:........:.....:.....x..:.. 125M 99/125 79.2% 125/94230402 0.0% 0/125 0.0% 132419957 57794598 +3135 chr4 + 190214555 153423118 153423117 153423173 56 CTAAAATACACAAACACACACAC--ACACACACACACATATATATATATATATATTTA chr4 + 94230402 74526069 74526068 74526126 74526069 74526068 74526126 58 CCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA .:..:..x....x.........:--...:.....x.:.....::.......:...... 23M2I33M 45/56 80.4% 58/94230402 0.0% 2/56 3.6% 78897049 NA +3024 chr4 + 190214555 153423122 153423121 153423175 54 AATACACAAACACACACACACACACACACACATATATATATATATATATTTATT chr4 + 94230402 74526071 74526070 74526124 74526071 74526070 74526124 54 AAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATT ..x.:x..x...........::x...:.....x.......::.......x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 78897051 NA +3097 chr4 + 190214555 153425309 153425308 153425380 72 GCATCTATAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x.:....:.........:x.:........x.xx.x...x..........::.:.:x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 77392103 NA +3813 chr4 + 190214555 153431825 153431824 153431914 90 GCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCACTTAAACCCAGGGGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x......:............:........x.xx.x...x.....:.......::.x:xx:..:..:..------..x..x...... 72M6D12M 63/84 75.0% 84/94230402 0.0% 6/84 7.1% 77398619 NA +3406 chr4 + 190214555 153433469 153433468 153433539 71 TGGCGTGCCTGTAGTCCCAGCTACTTGGGAGGTTGAGGTAGGAGGACTGCTTGAGCCCAGGAGTTTGAGGC chr4 + 94230402 76033202 76033201 76033272 76033202 76033201 76033272 71 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ...:.::.x......:...........::...:....x:xx.x.:.x::.....:.....:..:..x:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 77400267 NA +3090 chr4 + 190214555 153435025 153435024 153435097 73 GCTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCGCTTGAACCCAGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGCTTTGGGCTGTAG ..x.x....:.:...........::........x.xx.xx..x.:..........-....x.xx:..:..:.. 55M1D17M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% 77401819 NA +3018 chr4 + 190214555 153435287 153435286 153435335 49 GGGATTTTTGTTGTTGTTGTTGTTGTTGTGTTTCCTTTTGTTTTGTTTT chr4 + 94230402 90203138 90203137 90203186 90203138 90203137 90203186 49 GAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATT .:.:.....x.................xx....::....x......x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 63232149 NA +3215 chr4 + 190214555 153440776 153440775 153440832 57 GACAACCCTAAATGATTTACAAATGGCTCATTAAAAAAAAAAAAAAAAAAAAAAAGT chr4 + 94230402 5875960 5875959 5876016 5875960 5875959 5876016 57 GAAAACCCTAAATCATTGACAAGTGAATCTAAAAACAAAAAAAAAAAAAAAAAGAGT ..x..........x...x....:..:x..xxx...x.................:... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 147564816 42649739 +3930 chr4 + 190214555 153447377 153447376 153447458 82 GTGGTGGCACACACTTGTAGTTCCAGCTACTTGAGAGGCTGAGACTGGAGGATCATTTGAGGTCAGAAATTTGAAGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x...................:........x.:x.x.:.x..:....:x:.....::..x::....:.. 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 77414176 NA +7559 chr4 + 190214555 153448418 153448417 153448619 202 AGAAAGAAAACCCTAGACCCA---TTGGCAAGCAGAAAGTCAAATGGAAAATGTTCACTTT-AATAAGGCACAAAGGGATGTATACAAGATTCAAACAACATGAGTTGAAACCTGATATCCCTGAGGCTTGAGGTAAAAACGGACTCTTGGCTCTGGTGAGCCAAACATTAAGGAAACATGTAAGCACGTGTAAGTGCAAGCATGA chr4 + 94230402 21005471 21005470 21005669 21005471 21005470 21005669 199 AGAAAAGTGGCATTAAACCCAGCTCCAGCGGGGAGAAAACTGAATGGAAAATGTGCATTTTTAACATGGCACTG-GGTAAGTGTATAAGAGCAGAACAACATTTGCTGTAACCTGATATCCCTCAGGAATGAGGGAAAAGCTGACTGCTTGCTCCACTGAGCCAAAAAATAAGGAAACATGTAA----GTGCAAGTGT--GCATGA .....::x::.x:..:.....---:::..::.x.....::::............x..:...-..:.x.....x:-..x.x..:..:....x:x:........xx.:..x..............x...xx.....x....:.x....x:.x....::x.........x.x...............----...:.....:--...... 21M3I37M1I12M1D109M4D10M2D6M 143/195 73.3% 199/94230402 0.0% 11/195 5.6% 132442947 57771608 +3136 chr4 + 190214555 153448730 153448729 153448804 75 AAAGAATGATTTATATAATGTAGTCTTGCTTTCATGTCTCTCTCTCTCTCTATCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 17384369 17384368 17384443 17384369 17384368 17384443 75 AGATAACATTTTAAATAACACCGTCCTCCACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT .:.x..::x....x....:::x...:.x.x:.x.::.:.x.:xx.......x....................... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 136064361 54150194 +3145 chr4 + 190214555 153448767 153448766 153448811 45 CTCTCTCTCTCTCTATCTCTCTCTTTTTTTTTTTTTTTCCTTTTT chr4 + 94230402 17051647 17051646 17051691 17051647 17051646 17051691 45 CTTTTTGTCTCTCTATCTCTCCCTCTTTTTTTTTTTTTCCTACTT ..:.:.x..............:..:................x:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 136397120 53817435 +3206 chr4 + 190214555 153453225 153453224 153453323 99 TTTCTTCTGGTTCTCACTTTGTTTTTCTTTTCTTTTCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCATTCCTT chr4 + 94230402 39121010 39121009 39121108 39121010 39121009 39121108 99 TTTTTTCTGACCCTCTTTTTGTTGTTGTTTTTTTTTTTCCCCCTCAAGATTTGTCTCTCACGCTCCCCCTCCTCTCTACACCTCTCTTTTTAATTTTTT ...:.....:::...x:......x..x....:....:....:.:.xxxx.::x..:...x:x.:.:......:::.:x.x.::.::.::..x...::.. 99M 59/99 59.6% 99/94230402 0.0% 0/99 0.0% 114332215 75882340 +3502 chr4 + 190214555 153459792 153459791 153459874 83 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCCGGGAGACGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--....:.:...........::........x:xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 77426595 NA +9954 chr4 + 190214555 153466266 153466265 153466546 281 CGGCGCGGGGC--GGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGCACGGGGGCGGGCCCGGGGCGAGGCAGCTGGGGCGCCAGCGAGCTAGCGGCGAGCGCGGCGAGCAACGGAGAGGAGCGCGAGCAGCAGCATGGCGGGGCTCCGACGCCCGCAGCCCGGCTGCTACTGCCGCACCGCGGCGGCCGTGAACCTCCTGCTGGGCGTCTTCCAGGTCCTGCTGCCCTGCTGTCGCCCGGGAGGGGCTCAGGGACAAGGTCAGCCTTGCGCCGCTGGGCTCGC chr4 + 94230402 21008377 21008376 21008631 21008377 21008376 21008631 255 CGGCGCGGGCCCAGGGGCGGGGCGCTGCAGCGCTGGGCGGGGCCACCCGAGCGCTGCCCCT---CCCGGCACC---GCCCCCACCCAGC----------CGCGGCACGGCGCGGAGCGGCTCG---------GCATGGCGGGGTTGTGCTACCCGCAGCAGGGTGGCTATTGCCGCGCGGCCGCGGCCATGAATCTCTTGCTGGGTGTCTTCCACGTCCTCCTGCCCTGCTTCCGCCCTGGCGAGGCGCAGGGGCAAGGTGAGC---GCGGCGCGGGGTCGGC .........x.--...........xx..:.x..x.........x:.x..:.x..x.x...x---.xx....x.---.x.x...x.x...----------......:x.xx:.....x..xx..---------...........:.x:.x::........xx..:x....:......:.x..x......:....:...:.......:........x.....x..........x:.....x..x.:...x.....:......x...---...x...x...::x.. 11M2I48M3D9M3D13M10D24M9D132M3D16M 191/253 75.5% 255/94230402 0.0% 30/253 11.9% 132457889 57756666 +3238 chr4 + 190214555 153466283 153466282 153466399 117 GGGCGGGGCGGGGCGGGGCGGGGCGGCACGGGGGCGGGCCCGGGGCGAGGCAGCTGGGGCGCCAGC-----------GAGCTAGCGGCGAG---CGCGGCGAGCAACGGAGAGGAGCGCGAGCAGCAGCAT chr4 + 94230402 18194017 18194016 18194144 18194017 18194016 18194144 128 GGAAGGAGCGTGACGGGGCGGAGCGGCGGGTGGGCGGCCGTGGGACCAGCGAGCTGAGGCGCTGCCGCCTGCTGGATGATTGAGCGGTGAGGAAAGCTGAGAGAGCTGGAGGGGAG---AAGTAGTAACGT ..:x..:...x.:........:.....:x.x......x.x:...:.x..xx.....:.....::x.-----------..x:x.....:...---x..x.x...x:x:....:....---:..:..:.:.:. 66M11I14M3I22M3D12M 77/114 67.5% 128/94230402 0.0% 17/114 14.9% 135272266 54942289 +6020 chr4 + 190214555 153467192 153467191 153467350 159 TTTTTTGGTGTTCCTGCAGCGATTGAGCCGTTGCCGAACGTGGTGGAGCTGTGGCAGGCAGAAGAAGGGGAACTCCTGCTGCCCACTCAGGTGAGGACGACCAGGTGACAGGGCGGCTGTGGGTGTACGAGGGAGGAGAGGCGGGGAGGCCCCCGGTCC chr4 + 94230402 21008794 21008793 21008946 21008794 21008793 21008946 153 TTTCTCTCTCTGCCCGCAGCCATCGAGCCCATCCCCGGAGTGGTGGAGCTGTGGCAGGCCGAGGAGGGCGAGCTTCTGCTGCCCGCGCAGGTGAGG------GGGTCGGggggcggctgcggggtggctgccggggcggggcggggtggcggcgggacc ...:.:xx.x.x..:.....x..:.....xx.x..x::x....................x..:..:..x..:..:.........:.x.........------:...x:x:.........:...xxx:.x:xx.:..x.:.......x...xx.x..x.. 96M6D57M 107/153 69.9% 153/94230402 0.0% 6/153 3.9% 132458398 57756157 +3555 chr4 + 190214555 153469315 153469314 153469369 55 ACACACACACACACACACACACACACGTGTGTATGTGTGTGTATATATATCTCAT chr4 + 94230402 44243257 44243256 44243311 44243257 44243256 44243311 55 atatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGAT .:.:.:.....x....................:.......x.:.:.....x.x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 109226058 80988497 +3422 chr4 + 190214555 153473662 153473661 153473734 73 TGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.:....:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 77440457 NA +4024 chr4 + 190214555 153473821 153473820 153473898 78 TTAACACATGTTCTTTTTC---AATAGGGTGATTCTGAAGAGGGTCTGGAGGAGCCTTCTCAAGAACAGAGGTAAGGAAAA chr4 + 94230402 21015315 21015314 21015395 21015315 21015314 21015395 81 TTACCAAGTGTTCTCTTTCTTTGGTAGGCTGATTCTGAGGAGGATGTGGAAGAGCATCCAGAAGAACAAAGGTAAGCAAAA ...x..x:......:....---::....x.........:....:.x....:....x.:.xx.......:.......x.... 19M3I59M 61/78 78.2% 81/94230402 0.0% 3/78 3.8% 132458506 57756049 +3450 chr4 + 190214555 153480390 153480389 153480462 73 TGAGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAAGTGCTTGAACTCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x......:.........:x.:........x.xx.x....::.......:...:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 77447185 NA +3160 chr4 + 190214555 153490824 153490823 153490896 73 TGGGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.x......:...........::........x.xx.x...xx:.x.......:.:..x.xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 77457619 NA +3838 chr4 + 190214555 153493520 153493519 153493602 83 CATGGCGGTGCGCACTGGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:.....:.::--...:.:...........::........x.xx.x...x.............:..x.xx:..:..:.. 15M2D66M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 77460323 NA +3280 chr4 + 190214555 153540098 153540097 153540170 73 TGAAACTTTGTCTCAAAAATAAAAACAAAAAAACAAAAAAAAAAACCCCAAAACAAAAAACATCTGTCAGTTC chr4 + 94230402 82318108 82318107 82318180 82318108 82318107 82318180 73 TGAAGCTCACTCTTGCAAATATAAACATAAAACTTCAAAAATAAAACATAAAACAAAAATCATCTGTCAGATC ....:..:xx...::x.....x.....x....x:xx.....x...x.x:..........x..........x.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 71221990 NA +5338 chr4 + 190214555 153550059 153550058 153550157 99 TTTTCTTTTTTTAGCTTCTCGGACAAACTATTT---AGTGGAAAAGGCTTACATTTTCAGCCATCAGTTTTAGATTTTGGAATACAGTAAGTATCTTTTCTT chr4 + 94230402 21038259 21038258 21038360 21038259 21038258 21038360 102 TCTTCTTTTTTCAGCTTCTCAGCAAAAATGCTTCCAAATGGGAAGGTCTTACATTTTCACCCTTCAGTTCTGCATTTTGGAATGCAGTGAGTATCTTCCATT .:.........:........:.xx...x.::..---.:...:..:.x............x..x......:.:x..........:....:........::x.. 33M3I66M 77/99 77.8% 102/94230402 0.0% 3/99 3.0% 132511800 57702755 +11925 chr4 + 190214555 153555762 153555761 153556083 322 TTTTTCTCTTTGTTTCTCCTCCTAGGTTCCTGGGACATCCTGTAGCAAAGATTCTCCATGCTTACAACCCTAGTAGGGACAGCGAGGTTGTGGTGAATTCAGTGTTTGCAGCTGCTGGACATTTCCATGTACCGCCAGTTCCCTGCAGGGTGGGTGTTGATGGACTCCTGGAAACTATGCCGTGGCAGGCAGCCAGGTTTTCTTGCTTTCTTTGGCCTGAAGTTT--------------TTACTTTCTGCTCCCTGTCTCCCGCTTTTTCTGGTACCCAAACCTTTTCCTTCTGTGTGTTTACCTTAGCATTTACTTTTCCAGTTGCTCATTTTTA chr4 + 94230402 21039285 21039284 21039606 21039285 21039284 21039606 322 TCCTTCCCTTTTTTCCTCCTT-TAGATTACTGGGATTGCCTAGAGCTAAAATGCTGCATGCCTACAATCCTAGTAGAGATAGAGAAGTTGTAGTGAATTCAGTGTTTACATCTTCTAGACAGTTTCACGTGTCTCCTGTACATAGCCAGGTGAGTGTTGATGTACTTTTGGAAACTACGTCATGGCCAAGTGCAAAGCCTTCATGCTTCCTTTGGCCTAAACTTTTAATTCTATGGGGGtttttttgtgttttttttttttttttttttttAGGACC---ACCAATTTTTTTTCTGGTTTTGC--TAGC----ACTTTTC----TGCTCATTTTTA .::...:....x..:.....:-...:..x......:xx...:x...x..:..x..x.....:.....:........:..:..x..:.....:...............:..x..x..:....x..:..:..::.x..x..x.x:x..x:....:.........x...::.........:.:.:....x::xx..x.:.::...x.....:.........:..x...--------------..x:...x..:.:::.x.:.:::x:.....:.:.x...---...xx..::..:.x..xx...:.--....----.......----............ 21M1D203M14I38M3D23M2D4M4D7M4D12M 221/308 71.8% 322/94230402 0.0% 28/308 9.1% 132516477 57698078 +5253 chr4 + 190214555 153558255 153558254 153558385 131 CAGGTATCTGGAATTGGCACTCGTAGAATCTCTACAGAAGGGTCTGCAAAGCAGCTACCAAATGCTTATTTTCTGCTTCCAAAGGTCCAGAGCATTCAGCTGTCTCAAATGCAGGTCATTTTAATAGATTT chr4 + 94230402 21042312 21042311 21042442 21042312 21042311 21042442 131 CAGGTTTTTGGAGTGGGAACTCTGACATCTTCTCCAGAAGAGCCTAGAATACAGCTAGCAAATGCCTATTTACTGCTTCCACACATTCAGAACATCCAAGCGTCACGAAGGCTGGTACAGGTAATACATTT .....x.:....:.x..x....xx.x.x::...x......:.:..:x..x:......x.......:.....x.........x.x:.:....:...:..:x:...x.:..x..x...xxxxx.....x.... 131M 91/131 69.5% 131/94230402 0.0% 0/131 0.0% 132515943 57698612 +3336 chr4 + 190214555 153569949 153569948 153570048 100 TCTTGGCCTGTGAGTTAACATTCAAAGAATTTGAAGTCCTCTTCAATTTCTTGTTTTTATTTTATTTTATTTTATTTTTATTTTA-------ATCAGAAGTTCTCCA chr4 + 94230402 80808872 80808871 80808978 80808872 80808871 80808978 107 TCTCAGCCTATGAGTCTTCAGAATGGAAATCTGAGGTGCATTATATTTTCATGTCTACATTTTGTTTTGTTTTATTTTTTTCCTATTGTAACATCTGAAGTTTTCTA ...::....:.....:xx..xxxx:::...:...:..x.x:.x:.x....x...:.x:.....:....:..........x.::..-------...x......:..:. 85M7I15M 67/100 67.0% 107/94230402 0.0% 7/100 7.0% 72761077 NA +5075 chr4 + 190214555 153583136 153583135 153583678 543 TGTTTTAATCTCTGATTAAATACTCTGCTTTAATACTCTGATTCTTTTGGACAGATGATTCAGCAGTAAATATGTATATATTACATTCAGGAAACAGCCTTATATGGATACAGGTAATTGTAAATGCTTACCTAAAGTAACTTTTAAAATTGCAAGTG----TGCATTTAATTG---------TAGAATATGAGGGT----TTTTCAGGAACAGAGACAGAAGCACTATCTTTATTCTT---TTTTGC-------TTTAATTTAAGCC------------CATTTGCCCTTGCT-TGAACCTCTGTTTGTATGAAGATTGTCAGCATCCCCTC----------CATATGGTTATGGCACAGATGCTG---AGCAGTTGCTATGTATGGCTGGTCTGTGCTATTTATTCTAACGGTTCATTCAAACTGGATAAATACTCTCCCAGCTGAGAGTAGTCACATGGGACT-------------------TTTCTTTTATTTCAGGATATACGCCATTTCTCACAGAGAGATGCTCTGTCTCTGCAGTTTGAACCAGTACTACTACCTACTTCTACAACAAACTTTACAAAAATTGCTTCTTTTACCTGCAAAGGTACAG chr4 + 94230402 21051048 21051047 21051638 21051048 21051047 21051638 591 TACTTCAATCCCTGGTGAGCT----TACTGTAGTATTC--ATTCTTTTGAGCAGGTGATTTCGTGGTGGATATGTACGTCTTGCACTCTGGGAACAGTCGTGTGCATATACAGGTAATTATAGACTTTGGGTAGTCATATTTTAGAAGGTTGAATTTGATTTGGGAATTAATTAGCCAACTGTTATAATATCAGATTGATCTTATTGGTGGCAAATATCACA----TTTCTGTATTCCTAAATTGTGCCCAGGTATCTAGTAGATGTCTTAGAAGATCTACATTTGGTTTTGTAATGGATCTTTCCTTTTAAAGATGTAGGAGTAATTAACTTGAATAAAAATCCAAGGGCTCTGGCTTAGAAGTTGCAAGAAAATTGCAGACAATGGCTTGCAAATG-----TGGCAAGAAGATAAACTAATACTGGAGCTACAAT---------AATAATAGTAGTATGGTAGTGCTGCAGGGTTCATTATGTCTTGTCTTCATGCAGGAAATAAGGCAGTTGTCACAAAAAAACCGAAAACTTGTGGAATTTGAGCCAGTACTGATGTCTTCTTCATCTACTAACTTTACAAAAGTTGCTTCTATTTCTTGTGAAGGTACAG .::..:....:...:.x.:x.----.:..x..:..:..--.........::...:.....:x.::..::.......::.x..:..:..x..:.....:.x.:.:::x............:..:.:x:.x:x:x:xx:..x:..xx..::...x.xx..----x.x.x......:---------..x.....x..:x.----..x.::.x::..:.x.:x:x.----.x...x.....:.---..x...-------.:..:.xx.x.:.------------......x::...:x-..:.:..:.x:..x..x::.x:.x.xx:xx..:xx..:----------.xx.x..:.x....x:...x.:..---::x.:....x:xxx......x.:xx:..-----.:x:xx:.x.:.xx.:.x.x......xxx.:.x.---------:.x.:....x::....x.x.-------------------:..x.:..xx.x.....x...x.x..x..x.....:.:.:.:xxxxx:::.x..x.:.....:........:x.::..x....xx.x..x............:........x..x.:..::......... 21M4D13M2D118M4I12M9I14M4I21M4D13M3I6M7I13M12I14M1I38M10I24M3I28M5D34M9D20M19I130M 314/519 60.5% 591/94230402 0.0% 96/519 18.5% 132532088 57682467 +10026 chr4 + 190214555 153585447 153585446 153586408 962 TCTGTTCACAGGTATTTTAGAATGGACTCTTCTGCAACCCAGTTTCACATAGAGACTCATGAGAACACATCAGGACTTTGGTCAATATGGTACCGCAACCATTTTGACCGTAGTGTTGTATTAAATGATGTGTTTCTTTCCAAGGAGACCAAGCACATGTTAAAGGTACATATAGTATTTTTTCCCCAAGTTTTAGC-TTATTTTAAGCTTTGTTTAAGG-TCAGATGCTGTGAAAT--------TATTTCTATAAAATAATAAAAAATATTCCAAATGCTA--TGAAGTTATTATTTATATAAAATTTTATG-ATTTTTAAAACATGTATTTTTCTTT-TAACATTTTCAGAATTACTTTTAGGAGA---------------------CTTCTCTTTCTCTCTTTTTAAAAAACTGTTTTTAAAAGAGCTCAAAGG--GACCAGGATATAGCCTTTCAAAATTATTTGCTCTTACCAT-TATTCAAAAATATTATGTATATGTATTGTTCTAAAAAGATTAGTAAAAATGAGCCTGGTTCATGATAAAATA----GTAGGTTTTTTGCAAAATATCACTTACTGAAATTTCAAGATTACTTTTGTGAAATTTAAAACAGTGTCATCTTAAGCATTATTTGTAACCTATCATTTCTATAAAAATATTCCAACTTTTGATCTGGAAATAA---CTGAGTAAAATCATACTTTCTGAAGT------------ATAGAAGAATGTTAGCATCATACTTTATAA--------------------------------------------------TGATTTTAATCATAATT--AGTGTTAGGAAAAGTAATTTCTCTTGCTTCTTTTCTTTTTAGATTCTGAATTTCACTGGCCCTTTATTTCTACCTCCAGGCTGTTGGAATATATTTTCTTTGAAACTTGCTGTTAAAGACATTGCCATAAATCTATTCACCAATGTATTTTTGACTACAAACATAGGTGCCATTTTTGCAATACCTCTACAGATTTATTCAGCACCAACCAAGGTATTTTCTACA---ATACTATATGTGTGTTA chr4 + 94230402 21053265 21053264 21054258 21053265 21053264 21054258 994 TTTACTTGCAGGTATTTTGATGTCAATCCTTCTGCAGCAATGTTTCATATTGAACCACACCATAATATTTCAGGATTTTGGTCCGTATGGTTTACAAACAACTTCGAATTCAGCATTGAACTGAATGAAGTCTATGTATCCAGAGAAACAAAGAACATCTTAAAGGTG--------AGTTTTATTTCAGGTTCATGCAGTGCTTTGTCCTTGATTTAAGAATTTGGTCCTTTGACATACAGAGTAGATTTTTTTGAAAGACTCTG---TGTTCTCAATGCTAATTGAAATTGGT-------TAAAAATAAATGTAGCTCTGTTGCCTGTGACTTACTTCCTGAAAAGCCCAGG----CTCTCAGTAGATATTATTCGCTGTCCAACTTGCTTTTGTTTTGCTCATT---AGCAACTGTTTTTTAA---TTTCAGTTGCAGATAAAGATGCATC------AAATTATAGACCACTGCTCTGTTCTCAGAATTGTTGCTTGTGTTGTTTGTGCTCTA--------TAGGACTAAGCAT--TTCTTCATTGGCTGTTGTGGAAGTCTTTAGTACA-------TAGGTGAGCTTTCACGTTTA-------GGAGTCAAAATCAGT---AATTTACTCAT-----GCAACGGCTTGATTCAATCCAGACAAAACA------GATCTATGAATAAGCACACAATGTAGGCATCTAATTGGCAGTTTGTATATTTAGATAGGAGACTTTTATGTGCACACTGTACAGATCACTTATGGGCGCGTGTGTATTAACAGCAAAAACACAAAGGCACTGCTTGCTCTAAAATATTGTTCGAGTTTTAATTCAAGTG---TCTTTTG-----GTTCTTTCTAGATTCTGAACTTTGCTGAGCCTTTGACTCTATCTCCAGGCTGTTGGAATGTATTTTCTTTGAAACTTGATGTGAAAAACAATGTAACAAATGTGCTTTCTAGTATTTGTTTGGCCACCAGTGTGGGAGTGATGATTGAAATACCTCTGCAGATATATTCGACTGTGTCCAAGGTATTGTATTCAGTTGTGCTGAATGAGTATTA .:.::.::..........::x:.x:.::........:.xxx......:..x..:x.x..:x.x..:.:x......:.......x:......x:xxx...x.:..:..x:x:..::...x.:.:.....x..x.x.x.x....::..:..x...x....x........:--------.x....x:::..:...:xx..-x.::...:xx...x:......:-.:x.:.x..x...x..--------x....:.x.:...x.x.xx:---.:...:x.......--....:..:x.-------.....x.xx...-.x:.:.:xx:.x...:x:..x...:-.:.x.xx::...:----..:.:..x...---------------------...:.x...:x...x..---.:x..........x..---x:...:xx.--..:x.:...::.x.------.......xx:.:x:.:.:x.-.x:...:..x.:..::x.:.:.xxx....x..xx.--------..::.x.:...x.--...x.x..x::x.:----.x.:..:...x.:.x.-------.x:x...:x.....x.x...-------.:.:.:x...x....---.x:...xx...-----.:...xxx.::x...x..xx.:.:.xxx..------.....:x:.....---.xx.:.:x.:x...x:xx.:x.x...------------....:...x.x...xxxx..:...x..:.:--------------------------------------------------..x.:.x..x:..x:..--...x...:xxx....:---...:...-----x......:...........:..::...:x.....:x:....:.................:..................x...x...:...x..:x.:....x.::.:x.:.:.:.x.x....:.:..x.:::.:..x.:x..xx...x.........:.....x.....::.xx::x..........x.x.x..---:.:..:x...x..:... 168M8D21M1I22M1I16M8I20M3D14M2I10M7D12M1I25M1I13M4D11M21I17M3D16M3D9M2I14M6D20M1I35M8D13M2D14M4I16M7D20M7D15M3D11M5D30M6D13M3I26M12I30M50I17M2I16M3D7M5D194M3I17M 562/882 63.7% 994/94230402 0.0% 192/882 21.8% 132532182 57682373 +5717 chr4 + 190214555 153588884 153588883 153589009 126 TTTTAGGAAATCCTAATTGGAATGGGAGCCTTTCTCTGGATCAATCTACCTGGAATGTGGATTCTGAACTTGCAAATAAATTGTATGAAAGATGGAAGAAATATAAAAATGGTGACGTCTGCAAGT chr4 + 94230402 21055984 21055983 21056109 21055984 21055983 21056109 126 TTTTAGCGAATCTACTTTGGCAGAGGAGTCTTTCTCTTGACCGTTCTGCCTGGGATGTGGATTCTGAGCTGGCAAGAGAGCTTTATGAAAGATGGCAAAAAATAAGACGCGGGGAAGCCTGCAGGT ......x:....:xxx....x.x:....:........x..:.:x...:.....:.............:..x....:x:.::.x............x.:...xxx.:.x::..x..x.:.....:.. 126M 89/126 70.6% 126/94230402 0.0% 0/126 0.0% 132532900 57681655 +4507 chr4 + 190214555 153596271 153596270 153596390 120 AGGAATCCAGGTTTGGCATCCTCCACTTACATCTGCAGCCTTTGGAAATGAAAAGGGTTGGCGTAGTTTTCACACCTGCTGACTATGGAAAAGTTACCTCACTCATACTAATCCGGTAGG chr4 + 94230402 21061216 21061215 21061335 21061216 21061215 21061335 120 AGAAATGCAGTTCTGAGCTGCTTCGGTTAAATTTACAACCACTTGAAACCAGAGAAGTTGGTGTAATTTTTACACCAGTTGACTACAAAAGAGTGGCTTCCATTATTTTAATCAGGTAAG ..:...x...x.:..:xx.x..:.:x...x..:.:..:..x:.x....:x.:.:::.....:...:....:.....x.:......:::..:...x:.:..xx.:..x:.....x....:. 120M 77/120 64.2% 120/94230402 0.0% 0/120 0.0% 132535055 57679500 +8449 chr4 + 190214555 153598587 153598586 153598758 172 CAGGAATAACTTGACTGTTATTGACATGATTGGCGTGGAAGGATTTGGAGCAAGAGAGTTATTAAAAGTGGGTGGAAGACTTCCTGGTGCAGGAGGCTCACTCCGATTTAAGGTGCCCGAGTCCACGCTGATGGACTGCCGTAGACGTGAGTTCATATGTGTGGCACTCTGA chr4 + 94230402 21061939 21061938 21062110 21061939 21061938 21062110 172 CAGAAACAACTTGACTGTTCTGGATGTGGTCAATGTTGAAGGCTATGGAGCCAGAGAATTACTTAAAGTAGGGGGAAGATTGCCAGGTGCAGGAGGATCTCTTAGATTCAAGGTTCCAGAAGCTACGCTGATGGACTGCAGACGACGTGAGTAAGAAGAAGCAGGACTCTGA ...:..:............x.x..::..:.::::..x.....x.x......x.....:...:.x.....:..x......:.x..x...........x..x..:x....:.....x..x..:x.:...............x.xx.........xx:x.x:x.::.x....... 172M 126/172 73.3% 172/94230402 0.0% 0/172 0.0% 132536648 57677907 +3464 chr4 + 190214555 153599415 153599414 153599481 67 GCACCTGTAGTCCCAGCTACTCAAGAGGCTAGGGTGGGAGAATCACTTGAGCTTAGGAGTTTTAGGC chr4 + 94230402 76033206 76033205 76033272 76033206 76033205 76033272 67 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ....x......:.........::.:.....::.x:xx.x...x.......:.::..:..:...:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 77566209 NA +12586 chr4 + 190214555 153602134 153602133 153602345 212 TTTTTTGGTTCCCATTAGAACTGAAAGACAGTAAGCAAATTTTATCTATTACAAAGAACTTTAAAGTTGAGAATATTGGACCTCTTCCTATAACTGTTTCGTCTCTGAAAATTAATGGGTATAACTGCCAAGGTTATGGATTCGAGGTGCTGGATTGTCATCAGTTTTCCCTGGACCCAAACACATCCCGCGATATCAGCATTGTGTAAGCA chr4 + 94230402 21062394 21062393 21062605 21062394 21062393 21062605 212 TTGTTTTGTTTGTTTAAGAACTGAAAGACAGCAAGCAAATTGTGTCCATCACGAAGAACTTCAAAGTAGAGAATATTGGGCCTCTTCCTATAACAATTTCATCAATGAAAATCAATGGTTACAGTTGCCAAGGATATGGATTTGAGGTGTTAGACTGTCAGGAATTTTTTCTGGCTCAGAACTCATCACGGGAGATCAGCATCGTGTAAGCA ..x...x...:x:x.x...............:.........x.:..:..:..:........:.....x...........:..............x:....:..xx.......:.....x..:.::........x........:......:.:..:.....xx.:....::....x:.x:...x....x..x..x........:......... 212M 167/212 78.8% 212/94230402 0.0% 0/212 0.0% 132539740 57674815 +12308 chr4 + 190214555 153602524 153602523 153602731 208 TGACTCTTTTATTTTCAGGTTCACTCCAGACTTTACCTCCTCCTGGGTAATTCGGGACCTAAGTCTTGTAACCGCAGCGGACCTAGAATTTCGCTTCACTCTCAATGTGACTCTCCCTCATCACCTGTTGCCCTTGTGTGCAGACGTGGTTCCAGGACCCAGCTGGGAGGAGTCATTTTGGAGGCTCACGGTCTTCTTTGTCAGGTAA chr4 + 94230402 21063583 21063582 21063790 21063583 21063582 21063790 208 TGTCTCCTTTCCTGACAGATTCACTCCTGATTTTACATCTTCATGGGTAATCCGCGAGCTTACATTGGTGACTGCTGCTGATCTAGAGTTTCATTTCACGCTTAATGTGACTCTTCCTCACCATTTGTTACCACTCTGTGCAGATGTGGTGCCAGGACCCAGCTGGGAGGAGTCTTTCTGGAGGCTCACAGTCCTCTTTGTAAGGTAA ..x...:...x:.xx...:........x..:.....x..:..x........:..x..x..x.xx:.x..:..:..x..x..:.....:....::.....x..:...........:.....:..::....:..x:.x........:.....x.......................x..:...........:...:.......x...... 208M 163/208 78.4% 208/94230402 0.0% 0/208 0.0% 132538941 57675614 +33547 chr4 + 190214555 153603274 153603273 153604435 1162 ATACTGAACCTTGTTGCTTTCTTCCTCAGTTTGTCCCTGTTGGGTGTGATTTTAATAGCCTTCCAACAAGCACAGTACATTCTCATGGAATTCATGAAAACAAGACAGAGGCAAAATGCTAGCTCCTCTTCACAGCAAAACAATGGTCCTATGGATGTAATCAGCCCCCATTCTTACAAGTAAGAATTCTTAT--------------AGTGTGGTTGGGAGCGGGGGCGGTTT-CTCACT-----TTTGATATTACTCATTTCTGATTTAA-----------TTTTAAGTAAAC--------ATAAATTTTGATTCTACA-------TTTGCTTTCATA-----AAATTTTAAGTCATTATGTGAACAGCTGCCCCAT-TATTATT--------ATGAGATAGTCTCCATGCAAGGACTTAGTTGATGGGTATTCTCATTGGCAGAAAACTCTTGGAGCTTTGGAAGAAGGGAAGGTAA---AACTTACACTCAGTACTGATTGCT----------------ACCCTTTTCTCATGGATATG-----------GAAGCAGACAAGTAGAGTTT---------------------GATTTGATTTGCCTCTATGCTAAATGTT---------------------------------------TTT-----------------------------------CTTCTTAAATT--------------------------------------------CAGAAGCAATTGCAAGAACTTTCTCGATACATATGGCCCCTCTGATAAAGGCAGGGGGAAGAACTGCCTTCCAGTGAACACTCCCCAAAGCAGGATCCAGAATGCTGCAAAGAGGAGCCCAGCCACCTATGGTCATTCTCAGAAGAAGCACAAATGCTCAGTGTATTACAGTAAACACAAAACCAGCACAGCTGCGGCCAGCAGCACCAGCACGACTACTGAGGAAAAACAGACTTCACCCCTGGGCAGCTCACTGCCTGCTGCTAAAGAGGACATTTGCACTGATGCCATGCGTGAGAACTGGATCAGCCTCAGATATGCAAGTGGCATAAATGTCAACCTGCAGAAGAATTTAACCCTTCCCAAAAACTTACTGAATAAAGAAGAAAACACACTGAAAAACACAATTGTTTTCAGTAATCCTTCTTCAGAATGTAGTATGAAGGAGGGAATACAGACATGTATGTTTCCTAAGGAAACTGACATTAAAACTTCAGAGAACACAGCCGAGTTCAAGGAACGGGAGCTCTGTCCACTGAAGACCTCCAAGAAACTACCTGAAAACCATTTACCAAGAAACTCACCTCAGTACCACCAGCCAGACTTGCCAGAAATTTCCAGGAAAAATAATGGTAAT chr4 + 94230402 21065725 21065724 21067084 21065725 21065724 21067084 1360 ACACTGGCATTTGTTTTCTTCTTTGACAGTTTGTCCCTACTCGGTGTGATTCTGATAGCCTTCCAGCAAGCCCAGTATATTTTAGCAGAGTTCATGAAATCAAGACAGAGACCAAATCCTAGTTCTTCATTGCAGCAGAACAGCAACTCTGTTGATGTCATCAGCTCTGATTCTTACAAGTAAAAATACTTTTTCTTCATTCTTTTTAATGTGA--------AGTAGTGCTTTGCCTGCTAGTACTTTGATATTGCTGTGGACTGCTTTAGATGAGATCCTGTTCAAGGTGACCTCTTTCAGAGTGTTTTCAATACTGCAGCATATGTTTATCTTCACATCAGAGAGATGTAAGAACTCAAGGGTTTGTTTACCTTGTATATCATTGGTAGTACATAAGGTAAAAATAGTGTGATGG---AATTAATGGATACAC-CATGTACAGCAGCCATGGAAAGCT----AAGAGTGAAAAATAATGTGAATGGTCCTCAAATCTGATCTCCCAGGTCTCTGAGCTTGGGCGTTTGTTCAAGCACGCGAGCGTGTGTTTGAGGCACATACTTAGTCTTTTTCAACTCCCACTGAAATCAGAATGTGCTTGGCCAGTGTGATATATTTTCCAACTAACACATTTTCATGGCTTGTGAATATGTCCCCTTTTATTACAAGAATATACAATTAAACAATTCATGATAGCTTCCTAAATTTAAAAACCAACAAAAAAAAAGTCTCAAATAGTTTTTGTTTTCTGCAGGGGCAGCTGTAAGACATTTATGGATTCCTATAGTTCCTCAGATAAAGGTAAAGGGAAGGGCTTCCTGTCTGTAGGCACTTCT---AGCCGAAGTCAAAATGCTGCAAAGAGAAGTCCTGCGACCTACAGCCACTCTCAGAAGAAACACAAATGTTCGGTTTACTACAGTAAGCAAAAACCAAATGCAGT---GGCTGGCAGTGCCATTGCAACTACTGATGAGAAACAAAATCAGATTGTGGAGAACCAAATCTCAGCACCAAAAGAGGACATTTGCGCTAATGTTGTCAGTGAGAACTGGGTAACTCTAAAATATGCAAATGGCATAAGTGTTAAC------AAGAATTTAACTCTTCGAGAAAACTTTCTGGGCAAAGAAGAAAGTGCACTGAAAAATACAGTTCTCATTAAAAGTAGTTCTTCAGAGTGCAGTCTGAAGGAAGATCTTCAAACATGTATGTTTCCTAGGGAAACTAACCTTAAAGCTTCTGAAAATGTAGCTGAGGTCAAGGAACAGGAGTTCTGTCCTGTGAAGATGTCTAAGAAGCTACCTGAAAGTCACTTGTCAAGAAGTTCACCTCAG---CAACAGCTGGAACTGCAAGAAATTTCTAGGAAAAATAGCGGTAAT .:....:xx:.....x::.....:xx............::.x.........:.:...........:.....x.....:...:.x:::..:.........x..........:.x....x....:..:..x.::.....:....::::::..:.x.....x......:.:x..............:...x...x.--------------.:....:--------:.x:.:.x...-.:::..-----.........:..xxxxx...x....:-----------..:x.:..:.x.--------.xx:x...::..x..:..-------...:::....:.-----:.:x.x....xxx.:.x.x.xx::x:.:..:::.-...:...--------..:..:..:xxx:x:..::.x.:---.:..:....:..:x.-...xx:...x.:x.x:xx::....----....:x.:..::...---:.x.x::x....:xx.....:x.:----------------:x.x...x:...x.x.:::.-----------..:...x.:.xx...xx...---------------------:..x..x..x...xx.:..x..x..x..---------------------------------------...-----------------------------------....:......--------------------------------------------...::...::..:....xx...x.x...x.x...:.::....x........:.::......::..x...x:.x..:::....:.:---...x.:.x:..:..............:..:..x..x.....::.:..:...........:........:..:..x..:........:..x...x.x.:::...:---...::....::...x::.:........x..:.....:.x.:x:x::x...:x.:.:x.x.x:.x..xx.x...............:..:...:::.xx...........:.x.x:..x.:........:........:...:...------...........:....xx:.......x...:::..........:::..........:...:..x.:x.:.:x.:.xx.........:..:...x.......:.:xx.x..:................:.......:..x.....:....x..:..:::...:...x.........:....:.......xx......:x..:.....:..........::..:..::......::.........---..x....::..x:...x.........:..........::...... 193M14I7M8D11M1I6M5I26M11I12M8I18M7I12M5I34M1I7M8I23M3D15M1D24M4D15M3I24M16I20M11I20M21I28M39I3M35I11M44I85M3D104M3D145M6D243M3D45M 782/1131 69.1% 1360/94230402 0.0% 260/1131 23.0% 132537549 57677006 +4014 chr4 + 190214555 153607976 153607975 153608063 88 GGTGGTACATGAGCATGGGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAACCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033190 76033189 76033277 76033190 76033189 76033277 88 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:....:::xx:..x:.x...:..:...........::........x:xx.x...x.............:..x.:x:.....:.. 88M 61/88 69.3% 88/94230402 0.0% 0/88 0.0% 77574786 NA +6909 chr4 + 190214555 153620455 153620454 153620886 432 GGAGGATTTATTGCTGCAAAGTTAACA-GCAAGCTGGTCATAAATTGCTAGCAGATGTTTTTCCTTTT------------------TAGCCTCTTAGGAATTTTATAGGCAACAATTCTTTTT---------TCTTCTTTTTCTGTGGAGCTTGAGGGAAGTAGCGCAAGAGGGGAAATGAAAACAAACTAGAGGCTGAGCAACATACTTCTCA------------------GTTTTCAACAGCACTGG-------------------------------------GACATTCTGAATT---CAG----------ATGGAGTTGGTCT-----------------------TCAAACATTTAA---ACATGTTTTTA---------------TTCATATTTAGTTTAAACCATTAAA-CATTTACTTTCTCTT--------CTTTAGCAAGAAGATCCTTATAGGAAGAAAAAGCTTCAGGAGAAAAGAGAAGGAAATTTACAAAATTTAAATTGGAGTAAAAGTCGAACATGTAGAAAGAACAAGAAAAGGGGTGTTGCTCCAGTCTCAAGGTGCGT chr4 + 94230402 21068675 21068674 21069248 21068675 21068674 21069248 574 GGAGGATTTATTGCTGCTGCACTTGCACACAAACTGCTCGTAAAT--CTGACAGATGTTTCTTTTTTTGTCTCTCTTTATTTTTTTTAGCACATGGGGGATTTTATTGACTGCCTTCCTTTTTCTCCCTATATTTTCAGTTTCCATGCAAGTCAGGGCTAGATGCTGTGAGGGTGAAATGTTAACA--CTAGGAATTCAGAAATTTTTCTCTCATCATCTGCTGAAGGACGGATTCTTGAAAACACTGATAAAGCTGATGGTGTAGAAAAGAGGAAGTGCTGTGGAGAGGCACTGAATCTTACAGTAACTATGCAATTGAGTTGGGCTGTTTTGTCCAGAAAAAAATTACCTTGAAAGTCTAATGGAATTCTTTTTACTGAGGTAATTTTGTTTTATAATGTATGTATTCTCTTAGCTCGtttttttttttttttttaaatCTTCAGCAAGAAGATGCATTTAGGAAGAAGAAACCTCAAGAGAAGAAGGAAGGAAATGTCCCAAATATGAATTGGAATAGAAATAGAACATCTCGGAAAAATAAGAAAAAGAATGTTAACATATCTACAAGGTATGT .................x:x::.x:..-:...:...x..:.....--..::.........:.::....------------------....x:x.x:..:.......x.:.x:.xx.:......---------.:...xx....::..x.:x.:::..xx..xx..xxx:::..x......xx....--....::::.x..x..:x.x::.....------------------:..:.::.x.:.....:-------------------------------------..x::x......:---...----------..x.......x..-----------------------.::..x:.:...---.xx.x......---------------..:...x.xx:.x..xx.:x...:x-.:...x:...:.:..--------...:...........x.x.x.........:..:.:...:.....:.::.........x.x.x....x.:.......:..:..:.x......x.x.:..:..:.......:.::....:x:x:.x::x......::.. 27M1I17M2D21M18I37M9I54M2D26M18I17M37I13M3I3M10I13M23I12M3I11M15I25M1I15M8I137M 286/428 66.8% 574/94230402 0.0% 150/428 35.0% 132551780 57662775 +11375 chr4 + 190214555 153622819 153622818 153623093 275 GTCACCTCTCTCTTTCTGTTAGAAATGCATGAGGTTGACAGT-------TGTTTCAGGGAAACATGACTCCTTTCACT--TCCTCCAGAAGGTTACTACCAGAAGCCTGAGAAGAAATGTGTGGACAAGTTCTGCTCCGATTCCAGCTCTGACTGTGGGAGCTCCTCTGGCAGCGTGCGTGCCAGCCGGGGCAGCTGGGGGAGCTGGAGCAGCACCAGCAGCTCCGACGGGGATAAGAAGCCCATGGTGGACGCCCAGCACTTCCTGCCGGCCGGTGAGTCCTG chr4 + 94230402 21071278 21071277 21071560 21071278 21071277 21071560 283 GTTACTACTTTCTCCTATCAGGAAATGTA-GAGAATTACTGTAAATACATATTTCAGGTAACTTTTATTTTATTTATTATTTCTTTAGAAAGCTTTTATCAGTGGTCCAAAAAGAATTGTTTGGAGAAGTTTTGCTCTGATTCAAGCTCAGATTGTGGAAGTTCATCAGGAAGTGTTCGTGCCAGTCGTGGGAGCTGGGGTAGCTGGAGCAGTACCAGCAGTTCTGATGGAGATAAAAAGCCCATGATTACTGCCAGGCATTTTCTTCCATCCCGTAAGTTCTG ..:..:x..:...:::xx:x:......:.-...:x.x..x..-------.:.......x..x:x.x.:.::x..:.:.--.:..::....:.:.x:..:...x:.:.::.:.....x...x....x.....:.....:.....x.....x..:.....:..:..x..x..x..:..x........:..x..x........x...........:........:..:..:..:.....:.........:.x:x:...x:...:..:..x..:x..x..:...:... 29M1D12M7I29M2I204M 191/274 69.7% 283/94230402 0.0% 10/274 3.6% 132551541 57663014 +5996 chr4 + 190214555 153626109 153626108 153626229 121 TTTTTGAAACTTGTGATAATGTGTTTCTTTTAATGCAGGAGACAGTGTTTCACAAAATGATTTTCCTTCTGAAGCTCCCATCTCCTTGAATCTTTCTCATAACATCTGCAATCCCATGTAA chr4 + 94230402 21072595 21072594 21072709 21072595 21072594 21072709 115 TCTTTGATTTTTACAGTCATTCTTTTCTTT------AGGGGAGAATATTTCACAAAACGATTTTCCATCTGAAACTCCTATCACTTTAAATCTGTCTCATAACATCTGCAATACCAGGTAA .:.....xx:..::::.x..x:x.......------...:..x.:.:..........:........x......:....:...x.:..:.....x..................x...x.... 30M6D85M 89/115 77.4% 115/94230402 0.0% 6/115 5.2% 132553514 57661041 +6623 chr4 + 190214555 153632701 153632700 153632931 231 CTTGTTCTCTTCCGTAGGTCTTTACTCACCTGGAGACCTGTGGCCCACTCCGCCAGTGTGTGTGACAAGCAGCTTAAACTGCACCCTGGAGAACGGCGTGCCTTGTGTGATTCAGGAGTCGGCCCCGGTTCATAATAGGTACAGCTTCACTTCTCTGATTGGTGCCTTGCTTAGTCTAAGGGCTTGCAGTTGGAATTTGAGTTCAGTTT---CTTAGGGTTTCCTTACAAAAAT chr4 + 94230402 21075024 21075023 21075245 21075024 21075023 21075245 222 CTCTTTTCCCTGCTTAGGTCTTTACCCAGCAGGAGACTTGTGGCCTCCCCAGCCTGTCTGCCTGACAAACAGTTTAAACTACAACCTTGAGAATAATCTGCCATGCATGATCCAGGAAACACCTCCGATCCACAACAGGCA-AGTTATGTTTT----GTTAAGGTTTTCTGTGGTGCAGAGGAGTGC-------ACTTGAGCTCATTTTTAACTATCATCTTCCTTGCAAACAT ..:x..::.:.x.x...........:..x.x......:.......:x.:.x...x..x..:x......:...:.......:..x...x.....::::x....x..::....:.....:x.:x.:...:.:..:..:...:.-..:.x:::..:----:..::x.::..x:x.:..x:.::..xx...-------.:.....:...x...---..xxx:x:......:....x.. 141M1D11M4D30M7D15M3I22M 143/219 65.3% 222/94230402 0.0% 15/219 6.8% 132557677 57656878 +6516 chr4 + 190214555 153634179 153634178 153634285 107 TTTTTTGTGGCAGTTTCATTGATTGGAGTGCAACATGCGAAGGCCAGTTTTCCAGCGCATACTGTCCATTGGAATTGAACGATTACAATGCCTTTCCAGAAGGTAAG chr4 + 94230402 21076069 21076068 21076175 21076069 21076068 21076175 107 TTTCTTGGGACAGCTTCATTGACTGGAACGCAACTTGTGACAGCCAGTTTTCCAACGTGTATTGTCCATTTGAGATGAACGAATATGGTGCTATTCCAGAAGGTAAG ...:...x.:...:........:....::.....x..:..x:............:..::..:........x..:x.......x..:::...:x.............. 107M 83/107 77.6% 107/94230402 0.0% 0/107 0.0% 132558110 57656445 +26817 chr4 + 190214555 153636290 153636289 153636734 445 TTATACTTCAGCCCTACCTCACAAGCACCCGAAGCTTGTCTCCAATGTCTGGACTTTTTGGTTCCATCTGGGCCCCGCAAAGCGATGTGTATGAAAATTGCTGCCCCATCAACCCCACCACGGAACATTCGACCCACATGGAAAACCAAGCGGTCGTGTGCA---AGGAATACTACCCGGGGTTCAACCCGTTTCGCGCCTATATGAACCTGGACATATGGACTACCACAGCGAATAGGAATGCAAATTTCCCACTGTCTAGAGACTCGAGTTACTGTGGGAATGTGTGAAAATAATTGGATTTTTAAACAATGTGAATAAAGAGGCTTGT-GTTTTGATTACTAGTGTAAACTGGTTATTGAGATAGATTATGACATTGGTGGATATTTTGGCACTTTTATA-TGAAAATAAA-------TTTTTTAATGAAATCTGGGTGCTCTGTTTTTTTTAA chr4 + 94230402 21078529 21078528 21078981 21078529 21078528 21078981 453 TTGTTCTGCAGCCCTACCTCTCGAACACCCGAAGCTTGTCTCCAATGTCTGGACTTTTTGGTTCCATCTGGGCACCGCAGAGTGATGTTTATGAAAGCTGCTGCCCTGTCAGTGCCACGACCCAACACTCAACCCATGTTGAGAACCAAGCTGTTATGTGTAAGCAGGAATACTATCCGAGGTTTAACCCGTTCCGTGCCTACATGAACTTGGACATATGGACTACAGCAGCCAACCGAAATCCAAATTTCCCACTTTCGAGGGACTCGGGTTACTGCGGAAATGTGTGAAAGGAATTTGATTT---AAAAATGTGAATAAAGATGCCTGCAATTTTGATTACTAGAGTAAGCTGGTTGTTGA-ATAGATTACAATGTTGGTGGATATTTTGGCACttttatattgaaaataaatttttttttttttaCTGAAGTCTACGCATTCGGTGCATTTTGA ..:.x..x............x.:.:................................................x.....:..:.....x.......::........::...::x....x..xx....:..:.....::.x..:........x..::....:.---..........:...:....:........:..:.....:......:................x:....x..:x.:...x.............x..x..:......:.......:..:...........:x....x.....---..x..............x..:..:-:.............x....:......:....-........::.::..........................-..........-------.......x....:...:x.:::..x..x:x....:. 162M3I139M3D24M1I31M1D39M1I10M7I36M 364/441 82.5% 453/94230402 0.0% 16/441 3.6% 132557761 57656794 +4978 chr4 + 190214555 153641871 153641870 153641998 128 TGCCTGGATTCTAACTCCAGCTTC---ACCACATACTTAACCTCTCCGTGCCTCAGTTTCCTCTTCTGTAAAACGGGGATGATAATAGCAACATACCTCATGCAG---TTGTGAAGTTTAATGAATTAGCGTTT chr4 + 94230402 83501122 83501121 83501255 83501122 83501121 83501255 134 TACCTGGATTCTGTACCCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAATTCCTGTTT .:..........:xx:....x:..---:.x.xx..........x.x:............:.:.x:........:..:.x.....:..::x..x.......::x:.---......:.:.x...x....xx:.... 24M3I78M3I26M 91/128 71.1% 134/94230402 0.0% 6/128 4.7% 70140749 NA +3103 chr4 + 190214555 153657399 153657398 153657440 42 AAAAAAAAAAAAAAAAGAAAGAAAATTAAAAAAATAAAAGGT chr4 + 94230402 58237352 58237351 58237393 58237352 58237351 58237393 42 AAAAAAAAAAAAAAAAGAAAGCAATTTAGAAAAATAAAATGT .....................x..x...:..........x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 95420047 NA +3165 chr4 + 190214555 153663799 153663798 153663868 70 AAAGACTTAGTATAAAAAATGTAAAATATCTCATTAATTTAAAAATATTAATTATATCTTGAAAAAGTAT chr4 + 94230402 55620351 55620350 55620420 55620351 55620350 55620420 70 AAAGATTTAGCTTGTAGAAAGTTACGTATTTTGATAATTTAAAGATATTGATAATATCTTAAATACGTAT .....:....:x.:x.:..x..x.x:...:.::x.........:.....:..x.......:..x.x.... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 98043448 92171107 +35851 chr4 + 190214555 153678169 153678168 153680083 1915 CATACTTAGCAGATGTGTGTGAATCTGGAAGCACCTTTTCTATAGCCTGACAGAATTCTTACAACAGGTGAAAACTACTTGCCTTGTCTTC--GGGAGCCTTGTGCATTTGGATCTATCCTTTAACAACTAACCTTGTCTATCATCCTCACAGTCTGA----CTCTTTAC-----------------TTCTGGGATAGTCCAACAGAGACTTGAGGAAATGTTTCCTTCTCTCTTTTTCCATTTTCCCAAATTTAAATTCATGAAATATATATAA------GTTCTCTA-AATTAAAAACAACAGGATATTTTACCAACTTTCTGTT-CTGAACTAATTTAAAATTTATGTTTCCAATCCCCAGAGATATGAACTAAAAAGCCTGAAATAAAT---GTAGATCAGTCACTTGAGCTGA--CATATGAAGCAGTCAACTTTACTCTGAGACGTTTTGTTTGATCTTTCAAGTTTCTAAAAGTATTTGGAAGCGGGAAACACTGTTCTTCATATGAGATAAAAGGAAGAAAAAA--------GGACCTTATAGTCAGGCTCATTGTGAAAAAACTAATATT-----------------AAGATAAGCTGAAGCAATCAAATGAGAGCATTT-----GCAAATCACTTGTTGGAGGTAAAGCTGGAAGC------CTATGTAGTTCAGGAAAATGGAAGATGAGAT--GGCTGAGATCCCACGAAA-AGACCACGTCCAATAGAAACTGTAATAA-AACAGAGCTCAGCTACAGGAATTTTCAATGATGACAAAATTTTAAAGACATGCTTCTACTTTTGTATTGACTAAAGATCTTCAG-GTTGAAAGTGTCAAGATCTGCTTAATAGCATATCCTCTGTTGCAACATTCAAAATCATCAGGATTCTTAGATCTCAGTGAAAAATTGATGTTTGAAGAATAATTGAAGTATTCAGTCCATAAGGAAGCCTGAAGCTCCCTATACACCTTGAATTTCATGCTAAATAATCTGCAAGTTCTGGAAAATGCTGCTTAAC----------TCTAGAAAAACTGACTAACCTTGATCTTGGTCAGCATATACTTGGTTCTTTACATATCACTTATCAATGGTCAGAAAGGGAAGAATACTTGAACTTATCTAACACAAAAATTCACAATTTAACCAATTG--TTTCCCAGACACGAGGCTTACTAGAAGTGAGC--------CTTGTAAACTTTTA---TTTAGCTGCAATTT---AAATAACTTTACATTTTCAGATATGTGTTGAAGACCCTACCAGATGCT-------TTCTTCCC-------CTTTGAGAAGAAGCAGGAAAAG----AAAACTTTCTCTAAAGGGCAACTTGACTCTTTTCACACACTGAAGACTTTGGAAGCTGGTGGCAACAACTTCATTTGCTCCTGTGAATTCCTCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTTCTTATCGGTTGGCCAGCAAACTACCTGTGTGACTCTCCATCCCACGTGTGTGGCCAACAGGTTCAGGACGTCTGCCTTTTGGTGTCGGAGTGCCACAGGGTGGCACTGGTGTCTGGCATGTGCTGTGCCC---TGTTCCTGCTGATCCTGCCCATGGGGGTTCTGTGCCACTGTTTCCA--CAGCCCGTGGTACATGAAAATGATGTGGGCCTGGCTCTAGGCCAAAAGGAAGCACAGGAAAGCTTGCAGCAGGGACATCTGCTATGACGCATTTGTTTCTTATAGTGAGCAGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCTCTTCAAGTTGTGTCTTCATAAGTGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGACACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGAAGGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAGTGATGCTGCCATTCTCATTCTTCTGGAGCCCATTAAGA chr4 + 94230402 21105915 21105914 21107925 21105915 21105914 21107925 2011 CATGATCTGCAAAAGGCTGTGAACCTGAGAACCCTGCTGCTGCAGTCCAACCAAATCAGCTCCATAGACGAGGACT---CGTTTGGCTCTCAGGGGAAACTGGAGCTCTTGGACTTGTCAAATAATAGCCTGGCTCACTTGTCCCCAGTGTGGTTTGGGCCCCTTTTTTCGCTCCAACACCTTCGCATTCAAGGCAATTCCTACAGCGACCTGGGGGAAAGTTCCC------CCTTTTCCAGCCTGAGAAACTTGAGCTCCCTCCACCTGGGCAACCCACAGTTCTCCATCATCAGGCA----AGGAAACTTTGAGGGCATTGTGTTTCTCAACACGCTGAGGATCGACGGTGACAATCTCAGTCAGTATGAGCCTGGAAGTCTGAAATCGATCAGGAAGATAAATCACATGATCATAAGCATAAGAAGGATTGA--CGTATTCTCAGCAGTCATCAGGGACCTTCTGCACTCTGCCATTTGGTTAGAAGTTAGAGAGA-------TCAAATTAGATATTGAAAATGAAAAACTGGTTCAGAACTCTACTCTTCCTTTGACGATACAGAAACTTACATTTACCGGTGCTTCATTCACAGATAAA-TATATTAGCCAAATAGCAGTGCTATTGAAGGAAATTAGATCTTTGAG--AGAGTTAGAAGCAATAGATTGTGTGCTTGAGGGGAAAGGAGCATGGGATATGACAGAAATTGCAAGAAGTAAGCAAAGTTCTATTGAAACACTATCAATAACAAATATGACTATTCTGGATTTTTATTTGTTCTTTGACCTGGAAGGTATAGAGACACAGGTAGGTAAGCTGAAAAGACTCAGCATTGCAAGCTCTAAAGTCTTCATGGTACCATGCAGACTAGCAAGATATTTTTCATCACTTTTATATCTTGATTTCCATGATAATTTGCTTGTAAATAATCGCTTAGGAGAGACAATCTGTGAAGATGCATGGCCTTCTTTACAAACTCTAAATCTAAGTAAAAATTCTCTGAAATCCCTAAAACAGGCTGCAAGATATATAAGTAATCTACACAAACTGATTAATCTTGACATTAGTGAAAACAATTTTGGTGAGATTCCAGACATGTGTGAATGGCCTGAAAACCTGAAATATCTGAATCTCTCCAGCACTCAAATTCCCAAATTAACAACTTGCATTCCCTCAACTCTTGAAGTGCTGGACGTTAGTGCTAACAACCTGCAGGATTTTGGACTGCAACTGCCATTTCTCAAGGAGCTGTACCTGACAAAAAACCATCTGAAGACCTTGCCTGAAGCCACAGACATTCCTAACTTAGTGGCCATGTCGATCAGCAGAAACAAGCTCAACAGCTTCTCCAAGGAAGAGTTTGAGTCCTTCAAGCAAATGGAGCTGCTGGATGCCAGCGCCAATAACTTTATCTGCTCCTGTGAATTCCTCTCCTTCATTCACCATGAGGCAGGGATAGCCCAGGTGCTTGTGGGGTGGCCAGAAAGCTACATCTGTGACTCTCCGCTGACAGTGCGAGGGGCACAGGTTGGGAGTGTGCAGCTGTCACTGATGGAGTGCCACCGGTCCCTCCTAGTGTC---CTTGATCTGCACCCTGGTGTTCCTGTTCATCCTCATCCTGGTGGTCGTTGGGTACAAGTACCATGCAGTC--TGGTACATGAGAATGACCTGGGCATGGCTCCAAGCCAAGCGGAAGCCCAAGCGAGCCCCCACGAAAGACATCTGCTACGACGCTTTTGTCTCCTACAGTGAGAACGACTCCAACTGGGTGGAAAACATCATGGTGCAGCAGCTGGAGCAGGCATGTCCCCCCTTTAGGCTGTGCCTCCATAAGCGGGACTTTGTGCCTGGGAAGTGGATTGTGGACAACATCATTGACTCCATTGAGAAGAGCCACAAGACGCTCTTTGTGCTATCAGAGCACTTTGTGCAGAGCGAGTGGTGCAAGTATGAGCTGGATTTCTCGCACTTTCGCCTTTTTGACGAGAACAACGATGTGGCGATCCTCATCCTGCTGGAGCCCATTCAGA ...:x.:x...:.x.xx......:...::.:.x.:x:.x..::..:.::..x:...:xx:x.x.:..::..::...---:.::.x.:::..--....:x..x.x..x:.....::.:..xxx...:.:.:x:x..::::.:..x:.xx::::..:..:----..:...x.-----------------...x:..xx.x...x....x...:..:..:..x...:..------.:.......x::.xxx...:..:.::..x:xxx.:x.:x::..------......:.-x..:.::x.----....x.:...:xx::.x..x....-..x...xx::.x.::..:x.:.x.xx.....:.x:xx::.....:.:x::...:.......x:..---.x....x.:....x...x.xx.--....x....x.x.x.--:x..:...x..xx..:x.xxxx..:...:::x::.::xxx.xx.:x..:....:x:..:.x.-------...x..x.....xx:::..x:.....--------.:..::..:xx.:xxx:.x.:x:.:x.:.....x.:...-----------------x......:-.:x.x:.::.....::x..:::.x-----.x....:.xx.x..x...--.:..:.:.....------:.:...:x..x...::..x...:x...:...--.:.x..:..:x..x...:-.::.x.x..:.x..x.....xx..x:..-....:.xx.x.x:xx:xx.:.....:.x.x:.xx:xx:.::.x:...::..:xxxx:..xxx.:x:.x::..:..:.xx:....-:...x...:x::..::...x.x.::..x...::xxx..:x::x:.:...:xxx....::xxx..x::.x...:..x:...x..x...x.xx.x:.x:.x::x..::::x.xx..:..::.:.:..x..x..:xx:..::..:.x..::.:...:.x.xxxx....xx....x..x::..::..x.x.....xx:.:----------....x.x.......:...:.....:x..:..x.:x.:.xx:.....xxxx.x.xx:x..:x.:.x.....:.x....:xxx::....::....::.x..:.:...xx......x...x.....x.x...--..:..:x:..x.xx.:xx.:..:..x..x..:--------.:..:.::x....:---.x:.:....x....---..:x.:..x...x.xx:x.:.x.:xxx:........:.:..x..x..:-------...:.xx.-------.:x..xx:.xx.....:..x.:----..x.x:.....:..:.::x.::....x..:..:x.xxx.x..:..x:x:....x..::.:.x...:.....:..:.........................:...xx.xx..xx..x:x.:...x.:..x...:.x..x.......x..:....x.x...........:::xxxx...:.x..xxx.......x:.:::..x::x..x.::x..x:..........x..x:xx:x..:.....---.x..xx...::...---........:.x.....xx:.x...x...:x.xx.x:..x:x.x...--...:.--..........:.....:x.....x......:.:.....:x......x..:.x:...::x..xx.::...........:.....x.....:..:..:......x.x..:x..x..........:...x.:.....x...x........x.xx:xx:.....:...:.:.:....:..:......:.......::.x.....x........::.x.....:.................:.....x.....:..xx..........x..x..:x........x....:............x.x..:.....:.....x..:..:..:........:.......::....:x..x..:.....:..x............x... 76M3D12M2I65M4I8M17I39M6D43M6I8M1I9M4D24M1I65M3I22M2I15M2D62M7D26M8I39M17I8M1D24M5I18M2D12M6I31M2I18M1I28M1I84M1I196M10I129M2I32M8I14M3I14M3I48M7I8M7I22M4I242M3D14M3I46M2I5M2D379M 1154/1885 61.2% 2011/94230402 0.0% 156/1885 8.3% 132572254 57642301 +12828 chr4 + 190214555 153679433 153679432 153680078 646 TGAAGACTTTGGAAGCTGGTGGCAACAACTTCATTTGCTCCTGTGAATTCC----TCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTTCTTATCGGTTGGCCAGCAAACTACCTGTGTGACTCTCCATCCCACGTGTGTGGCCAACAGGTTCAGGACGTCTGCCTTTTGGTGTCGGAGTGCCACAGGGTGGCACTGGTGTCTGGCATGTGCTGTGCC-CTGTTCCTGCTGATCCTGCCCATGGGGG---TTCTGTGCCACTGTTTCCACAGCCCGTGGTACATGAAAATGATGTGGGCCTGGCTCTAGGCCAAAAGGAAGCACAGGAAAGCTTGCAGCAGGGA-----CATCTGCTATG-------ACGCATTTGTTTCTTATAGTGAGCAGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCTCTTCAAGTTGTGTCTTCATAAGTGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGACACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGAAGGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAGTGATGCTGCCATTCTCATTCTTCTGGAGCCCAT chr4 + 94230402 71565176 71565175 71565833 71565176 71565175 71565833 658 TGAAGGAGCTGCAAGCTGGGCAAAACCCGTTCAAGTGTTCGTGTGAGCTGCAGGACTTCCTGCGC-CTGGAGAGGCAGTCTGGGGGCAAG---CTGTCCGGCTGGCCAGAGGCGTACGTGTGCAAGTACCCAGAAGACTTGAGCGGAACGCAGCTTGAGGACTTCCACTTGACCGAGCTGGCTTGCAACA---CGACTCTGCTGCTTGTGACA-GCTCTGCTGCTGACCCTGGTGCTGGTGGCTGTGGTGGCCTTTCCGTGCATCTACCTGGATGTGCCGTGGTACGTGCGGATGCTGTGGCAGTGGACGCAGACGAAGAGGAGAGCTTGGCACGACTGCCCCGAGGAGCGGGAAACCGCTCTGCAGTTCCACGCCTTCATTTCCTACAGCGAACGCGATTCCCTGTGGGTGAAGAATGAGCTGATCCCCAATTTGGAGAAGGGGGAGGGCTGCATCCAGCTGTGTCAGCATGAGAGGAACTTTATCCCTGGCAAAAGCATTGTGGAGAACATCATTAACTGCATTGAGAAGAGCTACAAGTCCATCTTTGTGTTGTCGCCCAACTTTGTGCAGAGCGAGTGGTGTCACTACGAGCTGTACTTTGCCCATCACAGGTTGTTTAGTGAGAATTCCAACAGCTTAATCCTGATCTTGCTGGAGCCGAT .....:xx:..x.......xx:x...xxx....xx..:..x.....::.x.----::....x.:.-.x....x:...:x.xxx..x...:---..xx:...:.......x::xx...x....::.x.x:...xxxx..x..x.:..xxx:...x..x.....x..::.:.xx:x.x.::..xx...x...---:.:.x...x..::..xx.::-...x...:-...x:....x..x.xx..x.::...x..---...:....xx..:::.xx.::xx.........:..x::...x.....xxx...x:x:..:.x..:....::xx:x..x.x.x:...xx.::...-----x.x.:...x..-------....x..::....:..:..:..:.:x...x..:xx......:....:xxxx..:...xx:.x:.......xxxx:.xxx.:x.x..x..:......xx...:..x..:....:..:........:x.x..::.x..x..:......:...x......:.....x:....:x.::........:.x..xxxx.........x....:........:x.xx.x..:...x....:x.....:x.x.x:.x...::......:xx::.::x:x:x..:..x..::.x........x.. 51M4I10M1D24M3D97M3D20M1D8M1I28M3I94M5I11M7I295M 391/638 61.3% 658/94230402 0.0% 28/638 4.4% 82114257 NA +12647 chr4 + 190214555 153679433 153679432 153680078 646 TGAAGACTTTGGAAGCTGGTGGCAACAACTTCATTTGCTCCTGTGAATTCC----TCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTTCTTATCGGTTGGCCAGCAAACTACCTGTGTGACTCTCCATCCCACGTGTGTGGCCAACAGGTTCAGGACGTCTGCCTTTTGGTGTCGGAGTGCCACAGGGTGGCACTGGTGTCTGGCATGTGCTGTGCC-CTGTTCCTGCTGATCCTGCCCATGGGGG---TTCTGTGCCACTGTTTCCACAGCCCGTGGTACATGAAAATGATGTGGGCCTGGCTCTAGGCCAAAAGGAAGCACAGGAAAGCTTGCAGCAGGGA-----CATCTGCTATG-------ACGCATTTGTTTCTTATAGTGAGCAGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCTCTTCAAGTTGTGTCTTCATAAGTGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGACACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGAAGGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAGTGATGCTGCCATTCTCATTCTTCTGGAGCCCAT chr4 + 94230402 71554248 71554247 71554905 71554248 71554247 71554905 658 TGAAGGAGCTGCAAGCTGGGCAAAACCCGTTCAAGTGTTCATGTGAGCTGCAGGACTTCCTGCGC-CTGGAGAGGCAGTCTGGGGGCAAG---CTGTCCGGCTGGCCAGAGGCGTACGTGTGCAAGTACCCAGAAGACTTGAGCGGAACACAGCTGAAGGACTTCCACTTGACCGAGCTGGCTTGCAACA---CAACTCTGCTGCTTGTGACA-GCTCTGCTGCTGACCCTGGTGCTGGTGGCTGTGGTGGCCTTTCCGTGCATCTACCTGGATGTGCCGTGGTACGTGCGGATGCTGTGGCAGTGGACGCAGACGAAGAGGAGAGCTTGGCACGACTGCCCCGAGGAGCGGGAAACCGCTCTGCAGTTCCACGCCTTCATTTCCTACAGCGAACGCGATTCCCTGTGGGTGAAGAATGAGCTGATCCCCAATTTGGAGAAGGGGGAGGGCTGCATCCAGCTGTGTCAGCATGAGAGGAACTTTATCCCTGGCAAAAGCATTGTGGAGAACATCATTAACTGCATTGAGAAGAGCTACAAGTCCATCTTTGTGTTGTCGCCCAACTTTGTGCAGAGCGAGTGGTGTCACTACGAGCTGTACTTTGCCCATCACAAGTTGTTTAGTGAGAACTCCAACAGCTTAATCCTGATCTTGCTGGAGCCAAT .....:xx:..x.......xx:x...xxx....xx..:..x.....::.x.----::....x.:.-.x....x:...:x.xxx..x...:---..xx:...:.......x::xx...x....::.x.x:...xxxx..x..x.:..xxx....x.xx.....x..::.:.xx:x.x.::..xx...x...---:::.x...x..::..xx.::-...x...:-...x:....x..x.xx..x.::...x..---...:....xx..:::.xx.::xx.........:..x::...x.....xxx...x:x:..:.x..:....::xx:x..x.x.x:...xx.::...-----x.x.:...x..-------....x..::....:..:..:..:.:x...x..:xx......:....:xxxx..:...xx:.x:.......xxxx:.xxx.:x.x..x..:......xx...:..x..:....:..:........:x.x..::.x..x..:......:...x......:.....x:....:x.::........:.x..xxxx.........x....:........:x.xx.x..:...x....:x.....:x.x:x:.x...::.......xx::.::x:x:x..:..x..::.x........x.. 51M4I10M1D24M3D97M3D20M1D8M1I28M3I94M5I11M7I295M 390/638 61.1% 658/94230402 0.0% 28/638 4.4% 82125185 NA +23634 chr4 + 190214555 153679567 153679566 153680083 517 GTGTGTGGCCAACAGGTTCAGGACGTCTGCCTTTTGGTGTCGGAGTGCCACAGGGTGGCACTGGTGTCTGGCATGTGCTGTGCCCTG---TTCCTGCTGATCCTGCCCATGGGGGTTCTGTGCCACTGTTTCCA--CAGCCCGTGGTACATGAAAATGATGTGGGCCTGGCTCTAGGCCAAAAGGAAGCACAGGAAAGCTTGCAGCAGGGACATCTGCTATGACGCATTTGTTTCTTATAGTGAGCAGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCTCTTCAAGTTGTGTCTTCATAAGTGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGACACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGAAGGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAGTGATGCTGCCATTCTCATTCTTCTGGAGCCCATTAAGA chr4 + 94230402 21115289 21115288 21115805 21115289 21115288 21115805 517 GTGCGAGGGGCACAGGTTGGGAGTGTGCAGCTGTCACTGATGGAGTGCCACCGGTCCCTCNTAGTGTC---CTTGATCTGCACCCTGGTGTTCCTGTTCATCCTCATCCTGGTGGTCGTTGGGTACAAGTACCATGCAGTC--TGGTACATGAGAATGACCTGGGCATGGCTCCAAGCCAAGCGGAAGCCCAAGCGAGCCCCCACGAAAGACATCTGCTACGACGCTTTTGTCTCCTACAGTGAGAACGACTCCAACTGGGTGGAAAACATCATGGTGCAGCAGCTGGAGCAGGCATGTCCCCCCTTTAGGCTGTGCCTCCATAAGCGGGACTTTGTGCCTGGGAAGTGGATTGTGGACAACATCATTGACTCCATTGAGAAGAGCCACAAGACGCTCTTTGTGCTATCAGAGCACTTTGTGCAGAGCGAGTGGTGCAAGTATGAGCTGGATTTCTCGCACTTTCGCCTTTTTGACGAGAACAACGATGTGGCGATCCTCATCCTGCTGGAGCCCATTCAGA ...:.x..xxx.......x:.:::..x::x..x.::x..x:..........x..x:xx:xX.:.....---.x..xx...::.....---......:.x.....xx:.x...x...:x.xx.x:..x:x.x...--...:.--..........:.....:x.....x......:.:.....:x......x..:.x:...::x..xx.::...........:.....x.....:..:..:......x.x..:x..x..........:...x.:.....x...x........x.xx:xx:.....:...:.:.:....:..:......:.......::.x.....x........::.x.....:.................:.....x.....:..xx..........x..x..:x........x....:............x.x..:.....:.....x..:..:..:........:.......::....:x..x..:.....:..x............x... 68M3D16M3I44M2I5M2D379M 375/511 73.4% 517/94230402 0.0% 10/512 2.0% 132564278 57650277 +4389 chr4 + 190214555 153680462 153680461 153680566 105 ATTCCCCAGCATTTCTGTTAAGCTGCAGAAGATAATTAACACCTAGACCTGCCTGGAGTGGCC-ACTAATGAAGCTCAGCGGGAAGGGTTTTAGTTAAAGAAAACT chr4 + 94230402 21115814 21115813 21115913 21115814 21115813 21115913 100 ATCCCCAAGAGGTTCTGC-AAACTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCTCCTGATGAAGAGCAACAGCAGATGTTTTGG-----GAAAACT ..:...x..x:x.....:-..:....:.........x......x......:............-x..:......xx..:.:.x.::x.....:.-----....... 18M1D44M1I30M5D7M 77/99 77.8% 100/94230402 0.0% 7/99 7.1% 132564648 57649907 +4389 chr4 + 190214555 153680462 153680461 153680566 105 ATTCCCCAGCATTTCTGTTAAGCTGCAGAAGATAATTAACACCTAGACCTGCCTGGAGTGGCC-ACTAATGAAGCTCAGCGGGAAGGGTTTTAGTTAAAGAAAACT chr4 + 94230402 21107934 21107933 21108033 21107934 21107933 21108033 100 ATCCCCAAGAGGTTCTGC-AAACTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCTCCTGATGAAGAGCAACAGCAGATGTTTTGG-----GAAAACT ..:...x..x:x.....:-..:....:.........x......x......:............-x..:......xx..:.:.x.::x.....:.-----....... 18M1D44M1I30M5D7M 77/99 77.8% 100/94230402 0.0% 7/99 7.1% 132572528 57642027 +5570 chr4 + 190214555 153690295 153690294 153690569 275 GCTTTTGCAACTGCTGTTTCAGGGAGAGATTCATTCTTTCTACAATGGTTTGTCCTTGAGAATTATATGGGATGCCAGTAATGTGTTTAATATTCCATATAGAGAAAAATGTAGCTAGAGCTTGGCTAGTATAGCCTGGGGCATTATCTGTTTTAACAGAAGTTGGAATTCCTATCACCACAAAACACTGCAAAAGGTGATGCTTAACACATGCAG-----TCTCCTGATTGGCATGTAGCCCAGACAAAGTGAGAAAAGGTGTCCACACATACATGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ....:.x...x.:.:x...:.:x.xxxx...:::::x......x..x..:..x...xx:.:xxx:.x::....:..x...x.......x.:x::....:.xx:x.:...:x:xx.x..xx:x:.:.....:...x.....x....:........x.:xx:x:x...x..x..:..x...:....:..x::xxx:..:..x:x:.:x...:::::..-----.....x.:...:xxx..:.....x.:...:...xx.x.x..:..:.:.x.:..:..... 216M5I59M 158/275 57.5% 280/94230402 0.0% 5/275 1.8% 134624974 55589581 +25692 chr4 + 190214555 153702883 153702882 153704457 1575 TATTTGTAGGTTGAAGCAC--TGGACAATGCCACATACTT------TGTGGATGGTGTG---GGTCTTGGGGGTCATCATCAGCCTCTCCAAGGAAGAATCCTCCAATCAGGCTTCTCTGTCTTGTGACCGCAATGGTATCTGCAAGGGCAGCTCAGGATCTTTAAACTCCATTCCCTCAGGGCTCACAGAAGCTGTAAAAAGCCTTGACCTGTCCAACAACAGGATCACCTACATTAGCAACAGTGACCTACAGAGGTGTGTGAACCTCCAGGCTCTGGTGCTGACATCCAATGGAATTAACACAATAGAGGAAGATTCTTTTTCTTCCCTGGGCAGTCTTGAACATTTAGACTTATCCTATAATTACTTATCTAATTTATCGTCTTCCTGGTTCAAGCCCCTTTCTTC--TTTAACATTCTTAAACTTACTGGGAAATCCTTACAAAACCCTAGGGGAAACATCTCTTTTTTCTCATCTCACAAAATTGCAAATCCTGAGAGTGGGAAATATGGACACCTTCACTAAGATTCAAAGAAAAGATTTTGCTGGACTTACCTTCCTTGAGGAACTTGAGATTGATGCTTCAGATCTACAGAGCTATGAGCCAAAAAGTTTGAAGTCAATTCAGAATGTAAGTCATCTGATCCTTCATATGAAGCAGCATATTTTACTGCTGGAGATTTTTGTAGATGTTACAAGTTCCGTGGAATGTTTGGAACTGCGAGATACTGAT-----------TTGGACACTTTCCATTTTTCAGAACTAT-------CCACTGGTGAAACAAATTCATTGATTAAAAAGTTTACATTTAGAAATGTGAAAATCACCGATGAAAGTTTGTTTCAGGTTATGAAACTTTTGAATCAGATTTCTGGATTGTTAGAATTAGAGTTTGATGACTGTACCCTTAATGGAGTTGGTAATTTTAGAGCATCTGATAATGACAGAGTTATA-GATCCAGGTAAAGT----GGAAACGTTAACAATCCGGAGGCTGCATATTCCAAGGTTTTACTTATTTTATGATCTGAGCACTTTA----------TATTCACTTACAGAAAGAGTTAAAAGAATCACAGTAGAAAACAGTAAAGTTTTTCTGGTTCCTTGTTTACTTTCACAACATTTAAAATCATTAGAATACTTGGATCTCAGTGAAAATTTGATGGTTGAAGAATACTTGAAAAATTCAGCCTGTGAGGATGCCTGGCCCTCTCTACAAACTTTAATTTTAAGGCAAAATCATTTGGCATCATTGGAAAAAACCGGAGAGACTTTGCTCACTCTGAAAAACTTGACTAACATTGATATCAGTAAGAATAGTTTTCATTCTATGCCTGAAACTTGTCAGTGGCCAGAAAAGATGAAATATTTGAACTTATCCAGCACACGAATACACAGTGTAACAGGCTGCATTCCCAAGACACTGGAAATTTTAGATGTTAGCAACAACAATCTCAATTTATTTTCTTTGAATTTGCCGCAACTCAAAGAACTTTATATTTCCAGAAATAAGTTGATGACTCTACCAGATGCCTCCCTCTTACCCATGTTACTAGTATTGAAAATCAGTAGGAATGCAATAACTACGTTTTCTAAGGA chr4 + 94230402 21113312 21113311 21114882 21113312 21113311 21114882 1571 TATTTCAAAGTTTAGGCAAAATAAACAACTATGCATACTTGGAAAATGTGGGCAATTTGCACGGCCTTGG----CTGCAT--ACCTCCCTGAAGAACAAGCCCTGAGACAGGCCTGTCTTTCATGCGATGCCACTCAGTCATGCAACTGCTCTTTCATGGGTTTGGACTTCATTCCCCCGGGGCTCACAGGCAAAATCACGGTGTTAAACCTGGCCCATAACAGGATAAAGGTGATCCGAACACATGATCTGCAAAAGGCTGTGAACCTGAGAACCCTGCTGCTGCAGTCCAACCAAATCAGCTCCATAGATGAGGACTCGTTTGGCTCTCAGGGGAAACTGGAGCTCTTGGACTTGTCAAATAATAGCCTGGCTCACTTGTCCCCAGTGTGGTTTGGGCCCCTTTTTTCGCTCCAACACCTTCGCATTCA--AGGCAATTCCTACAGCGACCTGGGGGAAAGTTCCCCCTTTTCCAGCCTGAGAAACTTGAGCTCCCTCCACCTGGGCAACCCACAGTTCTCCATCATCAGGCAAGGAAA---CTTTGAGGGCATTGTGTTTCTCAACACGCTGAGGATTGACGGTGACAATCTCAGTCAGTATGAGCCTGGAAGTCTGAAATCGATCAGGAAGATAAATCACATGATCATAAGCATAAGAAGGATTGACGTATTCTCAGCAGTCATCAGGGACCTTCTGCACTCTGCCATTTGGTTAGATGTAAGAAA-ACTAGCATTCAGTGTTCCTGAAAAAATACAACTTTTGAGAATTATGTCTTCCTCTTTCGCAAAGAAAATTTCTTTA--AAACAGTGCTTATTTA---------------CAGATGCTACTGTGCCTGAGATTGTCAGCATTTTAGAAGGCATGCCAAAATTAATGGAGGTGGAGATGAAAGACTGTACACTC-------TTGGGCACTGGAAAG----TGGTATAAACAAATTCATGCAAACCAGTCACAATCTCTGAGAATTCTGACAATAGAGAATTTATCTATAGAAGAGTTTTATTTGTTTACAGATCTTCAGTCTGTACTAGATCTCCTATCTCTTT----------TTAGGAAAGTCACAGTTGAAAATACCAAGGTGTTTCTGGTGCCATGCAAACTTTCACAACACCTTCTATCATTGGAGTATCTTGACCTTAGCGCAAATTTACTTGGAGATCAGAGTTTGGAGCATTCAGCCTGTCAGGGTGCATGGCCTTCATTACAAACTCTAAATCTAAGTCAGAATTCATTGAGTGACTTAAAAATGACAGGTAAAAGCTTGTTTCATCTAAGAAACCTAAATCTCTTAGACATCAGTGAAAACAATTTTGGTGAGATTCCAGACATGTGTGAATGGCCTGAAAACCTGAAATATCTGAATCTCTCCAGCACTCAAATTCCCAAATTAACAACTTGCATTCCCTCAACTCTTGAAGTGCTGGACGTTAGTGCTAACAACCTGCAGGATTTTGGACTGCAACTGCCATTTCTCAAGGAGCTGTACCTGACAAAAAACCATCTGAAGACCTTGCCTGAAGCCACAGACATTCCTAACTTAGTGGCCATGTCGATCAGCAGAAACAAGCTCAACAGCTTCTCCAAGGA .....xx.:...x.:...x--.::....:xx::.......------.....::::.x..---..:.....----.xx...--:....:.::.:...x..x..::x.:x.....:.x...x..x..:..:xx..x.x:xx:x.....xx..xx:.:x:x:xx...::...:.......:.:..........:x:xx:.x.x::xx:.x:.....x..x.:........x.xxxxx..:x.x.xxx:...:..:..:.:.xx.........xx:::.:...x.....xx:.....:x:...:.:.x.x.....x..:..:..x...xx:..:.x...x.:x..x..:.x:..:.....:..xx.....x:.:.:x..x.:..:..x:.xx:x.....:::........:...--.::....:::.::x.:.:.--:..x...:.:....:x:x...:.......xx..:.::.....:x::..x.x...x...x:xx:...xx:xx....x..:x::x.xx:..:..::.xx.xx...:....---:....xx..xx..::x..:..::.x:x:..x::......:.x.xxx:....xx:xx:x........x::....:....:..:..:x:...x:...:...:x.....x.xx::..:.::x:.xx.:x:x..:.x:::.x::.:x.::x:..:x..x::x::..:.:x:xx..x..:..xx.:x..:.-...:::-----------:..:.x.xx.x.x.:....x....:...-------:.x:.x.::..:x.....:x..x.--...x...x:x:.....---------------.x....xx.x.x..::.x..:..:.x.:xx....::.xx:x..x:.x::...:x.:..:x.:...x.x:.x........x..:-------....xx.:.xx.:..----..:..xx:...:.x.:..:-:.x....x:.x.:.----.::..:x:.:.....xx:..:x:.::x...xxx.::......:..:...xxx.....xx:xx..x..----------...::x:..----------...::.:.:.......x.....:.x:..:..x........x..x..:xx............::.xxx......:..:..::.x..:..:..:.x......:x.x.xx..xx.:x::...:.:x...........x...:...x.....:..x:........:...x.:....x..:...:xx...:xxxxx..::...x:..x..x:.:.x:...:.:xx...:.:....:.:.x.xx.x.x..:......:.:..:.:....x:.xxx..x..x..x.:x...x.:.....x.....xx........:....::.x........x.:...x.x..:xx.....:x:.........xx:..x..x...:.x:.:..:.....::x:.....:..xx.xxxx...xxx:..x.x:....::xx.....:..:..x..:x.xx.x.:...:x.x:...x...::.:..x..x...x.xxx.x.x..:.xx...x.:.:xx..xx:.....:..:..::x:x.x.x:.xx..:..:..... 19M2I19M6I13M3I8M4D6M2D328M2I19M2D108M3D186M1D6M11I28M7I24M2D16M15D83M7D15M4D19M1I14M4I67M10I9M10D538M 891/1525 58.4% 1571/94230402 0.0% 96/1525 6.3% 132589571 57624984 +63124 chr4 + 190214555 153702955 153702954 153705263 2309 CCTCTCCAAGGAAGAATCCTCCAATCAGGCTTCTCTGTCTTGTGACCGCAATGGTATCTGCAAGGGCAGCTCAGGATCTTTAAACTCCATTCCCTCAGGGCTCACAGAAGCTGTAAAAAGCCTTGACCTGTCCAACAACAGGATCACCTACATTAGCAACAGTGACCTACAGAGGTGTGTGAACCTCCAGGCTCTGGTGCTGACATCCAATGGAATTAACACAATAGAGGAAGATTCTTTTTCTTCCCTGGGCAGTCTTGAACATTTAGACTTATCCTATAATTACTTATCTAATTTATCGTCTTCCTGGTTCAAGCCCCTTTCTTC--TTTAACATTCTTAAACTTACTGGGAAATCCTTACAAAACCCTAGGGGAAACATCTCTTTTTTCTCATCTCACAAAATTGCAAATCCTGAGAGTGGGAAATATGGACACCTTCACTAAGATTCAAAGAAAAGATTTTGCTGGACTTACCTTCCTTGAGGAACTTGAGATTGATGCTTCAGATCTACAGAGCTATGAGCCAAAAAGTTTGAAGTCAATTCAGAATGTAAGTCATCTGATCCTTCATATGAAGCAGCATATTTTACTGCTGGAGATTTTTGTAGATGTTACAAGTTCCGTGGAATGTTTGGAACTGCGAGATACTGATTTGGACACTTTCCATT--------TTTCAGAACTATCCACTGGTGAAACAAATTCATTGATTA---AAAAGTTTACATTTAGAAATGTGAAAATCACCGATGAAAGTTTGTTTCAGGTTATGAAACTTTTGAA-----TCAGATTTCTGGATTGTTAGAATTAGAGTTTGATGACTGTACCCTTAATGGAGTTGGTAATTTTAGAGCATCTGATAATGACAGAG--TTATAGATCCAGGTAAAGTG-----GAAACGTTAACAATCCGGAGGCTGCATATTCCAAGGTTTTACTTATTTTATGATCTGAGCACTTTATATTCACTTACAGAAAGAGTTAAAAGAATCACAGTAGAAAACAGTAAAGTTTTTCTGGTTCCTTGTTTACTTTCACAACATTTAAAATCATTAGAATACTTGGATCTCAGTGAAAATTTGATGGTTGAAGAATACTTGAAAAATTCAGCCTGTGAGGATGCCTGGCCCTCTCTACAAACTTTAATTTTAAGGCAAAATCATTTGGCATCATTGGAAAAAACCGGAGAGACTTTGCTCACTCTGAAAAACTTGACTAACATTGATATCAGTAAGAATAGTTTTCATTCTATGCCTGAAACTTGTCAGTGGCCAGAAAAGATGAAATATTTGAACTTATCCAGCACACGAATACACAGTGTAACAGGCTGCATTCCCAAGACACTGGAAATTTTAGATGTTAGCAACAACAATCTCAATTTATTTTCTTTGAATTTGCCGCAACTCAAAGAACTTTATATTTCCAGAAATAAGTTGATGACTCTACCAGATGCCTCCCTCTTACCCATGTTACTAGTATTGAAAATCAGTAGGAATGCAATAACTACGTTTTCTAAGGAGCAACTTGACTCATTTCACACACTGAAGACTTTGGAAGCTGGTGGCAATAACTTCATTTGCTCCTGTGAATTCCTCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTCTTGATTGATTGGCCAGCAAATTACCTGTGTGACTCTCCATCCCATGTGCGTGGCCAGCAGGTTCAGGATGTCCGCCTCTCGGTGTCGGAATGTCACAGGACAGCACTGGTGTCTGGCATGTGCTGTGCTCTG---TTCCTGCTGATCCTGCTCACGGGGGTCCTGTGCCACCGTTTCCATGGCCTGTGGTATATGAAAATGATGTGGGCCTGGCTCCAGGCCAAAAGGAAGCCCAGGAAAGCTCCCAGCAGGAACATCTGCTATGATGCATTTGTTTCTTACAGTGAGCGGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCCCTTCAAGTTGTGTCTTCATAAGCGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGCCACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGTATGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAATGATGCTGCCATTCTCATTCTTCTGGAGCCCATTGAGAAAAAAGCCATTCCCCAGCGCTTCTGCAAGCTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCCATGGACGAGGCTCAGCGGGAAGGATTTTGGGTAAATCTGAGAGCTGCGATAAAGTCCTAGG chr4 + 94230402 21105755 21105754 21108057 21105755 21105754 21108057 2303 CCTCCCTGAAGAACAAGCCCTGAGACAGGCCTGTCTTTCATGCGATGCCACTCAGTCATGCAACTGCTCTTTCATGGGTTTGGACTTCATTCCCCCGGGGCTCACAGGCAAAATCACGGTGTTAAACCTGGCCCACAACAGGATAAAGCTGATCCGAACACATGATCTGCAAAAGGCTGTGAACCTGAGAACCCTGCTGCTGCAGTCCAACCAAATCAGCTCCATAGACGAGGACTCGTTTGGCTCTCAGGGGAAACTGGAGCTCTTGGACTTGTCAAATAATAGCCTGGCTCACTTGTCCCCAGTGTGGTTTGGGCCCCTTTTTTCGCTCCAACACCTTCGCATTCA--AGGCAATTCCTACAGCGACCTGGGGGAAAGTTCCCCCTTTTCCAGCCTGAGAAACTTGAGCTCCCTCCACCTGGGCAACCCACAGTTCTCCATCATCAGGCAAGGAAA---CTTTGAGGGCATTGTGTTTCTCAACACGCTGAGGATCGACGGTGACAATCTCAGTCAGTATGAGCCTGGAAGTCTGAAATCGATCAGGAAGATAAATCACATGATCATAAGCATAAGAAGGATTGACGTATTCTCAGCAGTCATCAGGGACCTTCTGCACTCTGCCATTTGGTTAGAAGTTAGAGAGATCAAATTAGATATTGAAAATGAAAAACTGGTTCAGAACTCTACTCT-----------TCCTTTGACGATACAGAAACTTACATTTACCGGTGCTTCATTCACAGATAAATATATTAGCCAAATAGCAGTGCTATTGAAGGAAATTAGATCTTTGAG-----AGAGTTAGAAGCAATAGATTGTGTGCTTGAGGGGAAAGG---------AGCATGGGATA-TGACAGAAATTGCAAGAAGTAAGCAAAGTTCTATTGAAACACTATCAATAACAAATATGACTATTCTGGATTTTTATTTGTTCTTTGACCTGGAAGGTATAGAGACACAGGTAGGTAAGCTGAAAAGACTCAGCATTGCAAGCTCTAAAGTCTTCATGGTACCATGCAGACTAGCAAGATATTTTTCATCACTTTTATATCTTGATTTCCATGATAATTTGCTTGTAAATAATCGCTTAGGAGAGACAATCTGTGAAGATGCATGGCCTTCTTTACAAACTCTAAATCTAAGTAAAAATTCTCTGAAATCCCTAAAACAGGCTGCAAGATATATAAGTAATCTACACAAACTGATTAATCTTGACATTAGTGAAAACAATTTTGGTGAGATTCCAGACATGTGTGAATGGCCTGAAAACCTGAAATATCTGAATCTCTCCAGCACTCAAATTCCCAAATTAACAACTTGCATTCCCTCAACTCTTGAAGTGCTGGACGTTAGTGCTAACAACCTGCAGGATTTTGGACTGCAACTGCCATTTCTCAAGGAGCTGTACCTGACAAAAAACCATCTGAAGACCTTGCCTGAAGCCACAGACATTCCTAACTTAGTGGCCATGTCGATCAGCAGAAACAAGCTCAACAGCTTCTCCAAGGAAGAGTTTGAGTCCTTCAAGCAAATGGAGCTGCTGGATGCCAGCGCCAATAACTTTATCTGCTCCTGTGAATTCCTCTCCTTCATTCACCATGAGGCAGGGATAGCCCAGGTGCTTGTGGGGTGGCCAGAAAGCTACATCTGTGACTCTCCGCTGACAGTGCGAGGGGCACAGGTTGGGAGTGTGCAGCTGTCACTGATGGAGTGCCACCGGTCCCTCCTAGTGTC---CTTGATCTGCACCCTGGTGTTCCTGTTCATCCTCATCCTGGTGGTCGTTGGGTACAAGTACCATGCAGTCTGGTACATGAGAATGACCTGGGCATGGCTCCAAGCCAAGCGGAAGCCCAAGCGAGCCCCCACGAAAGACATCTGCTACGACGCTTTTGTCTCCTACAGTGAGAACGACTCCAACTGGGTGGAAAACATCATGGTGCAGCAGCTGGAGCAGGCATGTCCCCCCTTTAGGCTGTGCCTCCATAAGCGGGACTTTGTGCCTGGGAAGTGGATTGTGGACAACATCATTGACTCCATTGAGAAGAGCCACAAGACGCTCTTTGTGCTATCAGAGCACTTTGTGCAGAGCGAGTGGTGCAAGTATGAGCTGGATTTCTCGCACTTTCGCCTTTTTGACGAGAACAACGATGTGGCGATCCTCATCCTGCTGGAGCCCATTCAGAGCCAGGCGATCCCCAAGAGGTTCTGCAAACTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCTCCTGATGAAGAGCAACAGCAGATGTTTTGGGAAAACTTGAAAGCAGCCTTGAAGTCATAGG ....:.::.:...x..x..::x.:x.....:.x...x..x..:..:xx..x.x:xx:x.....xx..xx:.:x:x:xx...::...:.......:.:..........:x:xx:.x.x::xx:.x:.....x..x..........x.xx:xx..:x.x.xxx:...:..:..:.:.xx.........xx:::.:...x.....xx:.....:x:...:.:.x.x.....x..:..:..x...xx:..:.x...x.:x..x..:.x:..:.....:..xx.....x:.:.:x..x.:..:..x:.xx:x.....:::........:...--.::....:::.::x.:.:.--:..x...:.:....:x:x...:.......xx..:.::.....:x::..x.x...x...x:xx:...xx:xx....x..:x::x.xx:..:..::.xx.xx...:....---:....xx..xx..::x..:..::.x:x:..x::...:..:.x.xxx:....xx:xx:x........x::....:....:..:..:x:...x:...:...:x.....x.xx::..:.::x:.xx.:x:x..:.x:::.x::.:x.::x:..:x..x::x::..:.:x:xx..x..:...x.xx....x.:::.x..:..:.:.xxxx..x--------x.........x.x.x..-----------.:.x....:x.---.:..::.........xx::..:xxx.x....x...:..x:.x.xxx:..::.x::::x:..x.....-----.:....:.:..::-----...:.....:x:x:xx..:...::x...:.x..::xx..---------.....xx....-.......:--.xxx...xx:.:.:.....x-----.....::..x....xxx:.:xx..xx.....::::x.....:..:..:.x...:...::x:x.x..x.xx...xx::..:x.::x.x......x...xx:.x.x..:.xx......:..:x....x..x..:xx...xx..x:.:....xxx....:.xxx...::.x...:..x:...x......x.x..x:.x:.x::...:::.:.xx..::......:.....x.....:...:........:...x.:....xx.....:x.:..:x...x:.::..x.::.:.x.:::xx.x.:xx:.x...:x.x..x:...:...:x....:..:...:.:..:.:....x:.xxx..x..x..x.:x...x.:.....x.....xx........:....::.x........x.:...x.x..:xx.....:x:.........xx:..x..x...:.x:.:..:.....::x:.....:..xx.xxxx...xxx:..x.x:....::xx.....:..:..x..:x.xx.x.:...:x.x:...x...::.:..x..x...x.xxx.x.x..:.xx...x.:.:xx..xx:.....:..:..::x:x.x.x:.xx..:..:.....:x.::....x..x..:x.xxx.x..:..x:x:....x..::.:.x.........:..:.........................:...xx.xx..xx..x:x.:...x.:..x:.x:.x.:x.......x..::...x.x...........:::xxxx.....x..xxx:......x:.::...x.:x..x..:x..x:...:..:...x..x.xx:x..:.....---.x..xx...::.:...---......:.x.....xx..x:..x....x.xx.x:..x:x.x.....xxx.x.....:....:.....:x.....x........:.....:x.........:.x:...:....xx.:::..........:..:..x.....:..:.........x:x..:x..x..........:...x.:.....x...x........x.xx:xx:.........:.:.:....:..:..............::.x.....x........::.x.....:.................:...........:..xx..........x..x..:x........x....:.................:.....:.....x..:..:..:........:........:....:x..x..:.....:..x............x...:xx.:..x..:...x..x.x........:.........................................:x:x..:..:.xx..:.:.x.::x:.......x...::...:...x..xx.:.....x.... 327M2I19M2D108M3D209M8I17M11D11M3I67M5I13M5D39M9D11M1D8M2I20M5I848M3D16M3I562M 1428/2275 62.8% 2303/94230402 0.0% 62/2275 2.7% 132597200 57617355 +14869 chr4 + 190214555 153704481 153704480 153705246 766 TGAAGACTTTGGAAGCTGGTGGCAATAAC--TTCATTTGCTCCTGTGAATTCC----TCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTCTTGATTGATTGGCCAGCAAATTACCTGTGTGACTCTCCATCCCATGTGCGTGGCCAGCAGGTTCAGGATGTCCGCCTCTCGGTGTCGGAATGTCACAGGACAGCACTGGTGTCTGGCATGTGCTGTGCTCTGTTCCTGCTGATCCTGCTCACGGGGG------------TCCTGTGCCACCGTTTCCATGGCCTGTGGTATATGAAAATGATGTGGGCCTGGCTCCAGGCCAAAAGGA-AGCCCAGGAAAGCTCCCAGCAGGAAC----ATCTGCTATG-------ATGCATTTGTTTCTTACAGTGAGCGGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCCCTTCAAGTTGTGTCTTCATAAGCGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGCCACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGTATGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAATGATGCTGCCATTCTCATTCTTCTGGAGCCCATTGAGAAAAAAGCCATTCCCCAGCGCTTCTGCAAGCTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCCATGGACGAGGCTCAGCGGGAAGGATTTTGGGTAAATCTGAGAGC chr4 + 94230402 71565176 71565175 71565953 71565176 71565175 71565953 778 TGAAGGAGCTGCAAGCTGG--GCAAAACCCGTTCAAGTGTTCGTGTGAGCTGCAGGACTTCCTGCGC-CTGGAGAGGCAGTCTGGGGGCAAG---CTGTCCGGCTGGCCAGAGGCGTACGTGTGCAAGTACCCAGAAGACTTGAGCGGAACGCAGCTTGAGGACTTCCACTTGACCGAGCTGGCTTGCAACACGACTCTGCTGCT-TGTGACA--------GCTCTG---CTGCTGACCCTGGTGCTGGTGGCTGTGGTGGCCTTTCCGTGCATCTACCTGGATGTGCCGTGGTACGTGCGGATGCTGTGGCAGTGGACGCAGACGAAGAGGAGAGCTTGGCACGACTGCCCCGAGGAGCGGGAAACCGCTCTGCAGTTCCACGCCTTCATTTCCTACAGCGAACGCGATTCCCTGTGGGTGAAGAATGAGCTGATCCCCAATTTGGAGAAGGGGGAGGGCTGCATCCAGCTGTGTCAGCATGAGAGGAACTTTATCCCTGGCAAAAGCATTGTGGAGAACATCATTAACTGCATTGAGAAGAGCTACAAGTCCATCTTTGTGTTGTCGCCCAACTTTGTGCAGAGCGAGTGGTGTCACTACGAGCTGTACTTTGCCCATCACAGGTTGTTTAGTGAGAATTCCAACAGCTTAATCCTGATCTTGCTGGAGCCGATCCCTTCATACGTTATCCCTGCGAGGTACCACAAGCTGAAGGCTCTCATGGCAAAGAGAACGTACCTGGAGTGGCCAAAGGAGAGGAGCAAGCATGCCCTTTTCTGGGCTAACCTGAGGGC .....:xx:..x.......--....x.x.--....xx..:..x.....::.x.----::....x.:.-.x....x:...:x.xxx..x...:---:..x::.::.......x::xx...x....::.x.x:...xxxx.:x..x.:..xxx....x..x....:x...:.:.xx.x.x.::..xx..:x...x...xx::...x.-.x..:..--------......---.......:....x.xx:..x..------------.:.:....xx.::::.xx...xx.:......::..x::...x.....xxx...x:x...:.x..:....-...:::.x.x::..x..xxx....:.----.x.:...x..-------.:..x..::....:.....:..:..x...x..:xx......:....:xxxx..:...xx:.x:.......xxxx:.xxx.:x.x..x..:......xx...:..x..:....:..:........:x.x..::.x..x..:......:...x......:......:....:x.::........:.x..xxxx.........x....:........:x.x..:..:...x....:x.....:x.x.x:.x...::......:xx::.::x:x:x..:..x..::.x........x..:xxxxx.x.x.::..:..:xx.x.x.x.::.......x:.:xxx.x...:xx.xx.::..x..............x.x...x::.:x:x...:x.xxxxx..:....:x..:.....:.. 19M2D8M2I22M4I10M1D24M3D110M1D7M8D6M3D22M12I69M1I26M4I10M7I415M 462/748 61.8% 778/94230402 0.0% 48/748 6.4% 82139305 NA +14703 chr4 + 190214555 153704481 153704480 153705252 772 TGAAGACTTTGGAAGCTGGTGGCAATAAC--TTCATTTGCTCCTGTGAATTCC----TCTCCTTCACTCAGGAGCAGCAAGCACTGGCCAAAGTCTTGATTGATTGGCCAGCAAATTACCTGTGTGACTCTCCATCCCATGTGCGTGGCCAGCAGGTTCAGGATGTCCGCCTCTCGGTGTCGGAATGTCACAGGACAGCACTGGTGTCTGGCATGTGCTGTGCTCTGTTCCTGCTGATCCTGCTCACGGGGG------------TCCTGTGCCACCGTTTCCATGGCCTGTGGTATATGAAAATGATGTGGGCCTGGCTCCAGGCCAAAAGGA-AGCCCAGGAAAGCTCCCAGCAGGAAC----ATCTGCTATG-------ATGCATTTGTTTCTTACAGTGAGCGGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCCCTTCAAGTTGTGTCTTCATAAGCGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGCCACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGTATGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAATGATGCTGCCATTCTCATTCTTCTGGAGCCCATTGAGAAAAAAGCCATTCCCCAGCGCTTCTGCAAGCTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCCATGGACGAGGCTCAGCGGGAAGGATTTTGGGTAAATCTGAGAGCTGCGAT chr4 + 94230402 71554248 71554247 71555031 71554248 71554247 71555031 784 TGAAGGAGCTGCAAGCTGG--GCAAAACCCGTTCAAGTGTTCATGTGAGCTGCAGGACTTCCTGCGC-CTGGAGAGGCAGTCTGGGGGCAAG---CTGTCCGGCTGGCCAGAGGCGTACGTGTGCAAGTACCCAGAAGACTTGAGCGGAACACAGCTGAAGGACTTCCACTTGACCGAGCTGGCTTGCAACA---CAACTCTGCTGCTTGTGACA------GCTCTG---CTGCTGACCCTGGTGCTGGTGGCTGTGGTGGCCTTTCCGTGCATCTACCTGGATGTGCCGTGGTACGTGCGGATGCTGTGGCAGTGGACGCAGACGAAGAGGAGAGCTTGGCACGACTGCCCCGAGGAGCGGGAAACCGCTCTGCAGTTCCACGCCTTCATTTCCTACAGCGAACGCGATTCCCTGTGGGTGAAGAATGAGCTGATCCCCAATTTGGAGAAGGGGGAGGGCTGCATCCAGCTGTGTCAGCATGAGAGGAACTTTATCCCTGGCAAAAGCATTGTGGAGAACATCATTAACTGCATTGAGAAGAGCTACAAGTCCATCTTTGTGTTGTCGCCCAACTTTGTGCAGAGCGAGTGGTGTCACTACGAGCTGTACTTTGCCCATCACAAGTTGTTTAGTGAGAACTCCAACAGCTTAATCCTGATCTTGCTGGAGCCAATCCCTCCATACGTTATCCCTGCGAGGTACCACAAGCTGAAGGCTCTCATGGCAAAGAGAACGTACCTGGAGTGGCCAAAGGAGAGGAGCAAGCATGCCCTTTTCTGGGCTAACCTGAGGGCAGCTAT .....:xx:..x.......--....x.x.--....xx..:..x.....::.x.----::....x.:.-.x....x:...:x.xxx..x...:---:..x::.::.......x::xx...x....::.x.x:...xxxx.:x..x.:..xxx:...x.xx....:x...:.:.xx.x.x.::..xx..:x...---..:.x...x..::..xx.::------......---.......:....x.xx:..x..------------.:.:....xx.::::.xx...xx.:......::..x::...x.....xxx...x:x...:.x..:....-...:::.x.x::..x..xxx....:.----.x.:...x..-------.:..x..::....:.....:..:..x...x..:xx......:....:xxxx..:...xx:.x:.......xxxx:.xxx.:x.x..x..:......xx...:..x..:....:..:........:x.x..::.x..x..:......:...x......:......:....:x.::........:.x..xxxx.........x....:........:x.x..:..:...x....:x.....:x.x:x:.x...::.......xx::.::x:x:x..:..x..::.x........x..:xxxxx.x.x.::..:..:xx.x.x.x.::.......x:.:xxx.x...:xx.xx.::..x..............x.x...x::.:x:x...:x.xxxxx..:....:x..:.....:..x..x.. 19M2D8M2I22M4I10M1D24M3D97M3D20M6D6M3D22M12I69M1I26M4I10M7I421M 463/754 61.4% 784/94230402 0.0% 48/754 6.4% 82150233 NA +32364 chr4 + 190214555 153704615 153704614 153705264 650 GTGCGTGGCCAGCAGGTTCAGGATGTCCGCCTCTCGGTGTCGGAATGTCACAGGACAGCACTGGTGTCTGGCATGTGCTGTGCTCTG---TTCCTGCTGATCCTGCTCACGGGGGTCCTGTGCCACCGTTTCCATGGCCTGTGGTATATGAAAATGATGTGGGCCTGGCTCCAGGCCAAAAGGAAGCCCAGGAAAGCTCCCAGCAGGAACATCTGCTATGATGCATTTGTTTCTTACAGTGAGCGGGATGCCTACTGGGTGGAGAACCTTATGGTCCAGGAGCTGGAGAACTTCAATCCCCCCTTCAAGTTGTGTCTTCATAAGCGGGACTTCATTCCTGGCAAGTGGATCATTGACAATATCATTGACTCCATTGAAAAGAGCCACAAAACTGTCTTTGTGCTTTCTGAAAACTTTGTGAAGAGTGAGTGGTGCAAGTATGAACTGGACTTCTCCCATTTCCGTCTTTTTGATGAGAACAATGATGCTGCCATTCTCATTCTTCTGGAGCCCATTGAGAAAAAAGCCATTCCCCAGCGCTTCTGCAAGCTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCCATGGACGAGGCTCAGCGGGAAGGATTTTGGGTAAATCTGAGAGCTGCGATAAAGTCCTAGGT chr4 + 94230402 21115289 21115288 21115938 21115289 21115288 21115938 650 GTGCGAGGGGCACAGGTTGGGAGTGTGCAGCTGTCACTGATGGAGTGCCACCGGTCCCTCNTAGTGTC---CTTGATCTGCACCCTGGTGTTCCTGTTCATCCTCATCCTGGTGGTCGTTGGGTACAAGTACCATGCAGTCTGGTACATGAGAATGACCTGGGCATGGCTCCAAGCCAAGCGGAAGCCCAAGCGAGCCCCCACGAAAGACATCTGCTACGACGCTTTTGTCTCCTACAGTGAGAACGACTCCAACTGGGTGGAAAACATCATGGTGCAGCAGCTGGAGCAGGCATGTCCCCCCTTTAGGCTGTGCCTCCATAAGCGGGACTTTGTGCCTGGGAAGTGGATTGTGGACAACATCATTGACTCCATTGAGAAGAGCCACAAGACGCTCTTTGTGCTATCAGAGCACTTTGTGCAGAGCGAGTGGTGCAAGTATGAGCTGGATTTCTCGCACTTTCGCCTTTTTGACGAGAACAACGATGTGGCGATCCTCATCCTGCTGGAGCCCATTCAGAGCCAGGCGATCCCCAAGAGGTTCTGCAAACTGCGGAAGATAATGAACACCAAGACCTACCTGGAGTGGCCTCCTGATGAAGAGCAACAGCAGATGTTTTGGGAAAACTTGAAAGCAGCTCTAAAATCGTAGAT .....x..xxx:......x:.::...x.:x..x..:x..x:...:..:...x..x.xx:xX.:.....---.x..xx...::.:...---......:.x.....xx..x:..x....x.xx.x:..x:x.x.....xxx.x.....:....:.....:x.....x........:.....:x.........:.x:...:....xx.:::..........:..:..x.....:..:.........x:x..:x..x..........:...x.:.....x...x........x.xx:xx:.........:.:.:....:..:..............::.x.....x........::.x.....:.................:...........:..xx..........x..x..:x........x....:.................:.....:.....x..:..:..:........:........:....:x..x..:.....:..x............x...:xx.:..x..:...x..x.x........:.........................................:x:x..:..:.xx..:.:.x.::x:.......x...::...:...x..xx....:..x...:. 68M3D16M3I563M 481/646 74.5% 650/94230402 0.0% 6/647 0.9% 132589326 57625229 +3205 chr4 + 190214555 153718199 153718198 153718270 72 TTCCTAAGGAGTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTGAAGCAGATGCACTGGAT chr4 + 94230402 28945999 28945998 28946070 28945999 28945998 28946070 72 TTGTTAAGATGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTTGGACTGAGCATCTGGAT ..x:....:x.xx.....................x.x:.x..............x:::.x..xxxx...... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 124772200 65442355 +7872 chr4 + 190214555 153731259 153731258 153731635 377 TGAAATGTAGGAATGCTGTCCCTCATAAATAAACACATGAAATATATGAAATCGAGGCACATACATGCAAAGAAGGAAGCCTGGCATCTGGAACTCATTAATAATGCCACAGGGGTCACCATCTGGGCATGTGTGTATAA-AACACATCTGCACTACTGGCAACGGGTGGCTCATGCATCTGGATCACATCACTC-ACGTTCTCCCCAACCACATATCATAGCAGGAGGAATTTCCTGATGAATCAGA-TGCTGCCCAAAAGTACCATGGTTTCTTTGTGTTGCCATGCACATAATGAATCTGAAAAGAATTACAGATCAAGCTAAAACAAAGAT--------ACCTTTCATTTGGCTAATTGTACAGAATGATGAATGGGCCATGCA chr4 + 94230402 21118969 21118968 21119330 21118969 21118968 21119330 362 TGAAATGCAGAAACATTTTGTCATGTGGATGAGGACA---AAGATATGAA-TCTAGTCCTACAGTTGAAAAT-------TCCAGTATT---GATTTATTATTAATACTTTAAGG-------TCTGGACAATTCCATAAAATAATACATATATATTGCTGCTAAATGGAAGCTTTAACATCTGGATCATATTATTCCAGATTTTCCTCATCCACCCTTCACAGAAAGAGGAATTTCCTGACAAATCAGATTGCTGCCCAAAGGTAAAATG--TTTTTCTCATTACCATACTTTAAATGAGCTCAAAAAGACTTAGAAATGAAGTCAGCATAAGCATCATAGACAACTTTCCCATTTTCTAATTATGCAAA---TTAAACAGGTCATACA .......:..:..:::.x.x:.x::.::..:.:x...---..x.......-..x..x.x:.:.xx..x...x-------:.::.:..:---:.:.:....x....:.:x:.:..-------.....:..xx.x::..x..-..:....x.::.:.:...x:..xx..x:...:xx:...........:..:.:..-.x:..:...:..x....x:x...:..x.:..............::.......-...........:...xx...--..:..:x::..:....:.x:xx.....:::::......x...x.:..x...::.:x.:..:x..--------..:..:.xx..xx......:.:..:.---x.:..::..:...:.. 37M3D10M1D21M7D9M3D23M7D19M1I54M1I52M1I20M2D64M8I26M3D16M 227/351 64.7% 362/94230402 0.0% 37/351 10.5% 132612290 57602265 +3132 chr4 + 190214555 153731638 153731637 153731706 69 ATTAAAAGAAAGAAGGAAAGAGAAAGAAAGAGAGAGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAA chr4 + 94230402 85790956 85790955 85791024 85790956 85790955 85791024 69 ATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAA ..........::..::...:.....:..:::.:...:...:x::......:.x:...x:x:..:..:.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 67940682 NA +3019 chr4 + 190214555 153753506 153753505 153753583 78 AAACCCTGAAACACAAAATAACTGTGTTTTTATCTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTCCCGAGGTGGAG chr4 + 94230402 80379638 80379637 80379715 80379638 80379637 80379715 78 AAATGCAGAAAGTCTGACAAATTGTGACTTTACTTTTAAATTCTCTCTCTCTCTCTTTTTTTTTCTTCCATTATAGAG ...:x.x....xx.x:.xx..:....x:....::...xxx:.......................:.:..:xx:.:... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 73373868 NA +3642 chr4 + 190214555 153761083 153761082 153761171 89 GTGGTACACCTGTAGCCCCAGCTACTCAGGAGGTTGAGGCTGGAGGATCGCCGGAGCCCGGGAGGTTCAGGCTGCAGTAAGCCGTGATG chr4 + 94230402 76033201 76033200 76033286 76033201 76033200 76033286 86 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGATG .....:...x.....::.........::::...:....x.:x.x.:.x.:.:x..:...:.:..x..::.....:..x.---.:..... 79M3D7M 59/86 68.6% 86/94230402 0.0% 3/86 3.5% 77727882 NA +36031 chr4 + 190214555 153780585 153780584 153782418 1834 AAAGAATAGGTAAAACAGGATGTAAAGTTTATATACAAGAATATAATGTTTATCTGAAATATTTACAGTGTTGGTTAAAGCAATATTTTTACAACTTTTAAAGGTAAACTACTATGTATATTACAGGTAAGCTACAATGGGTTTAATTTGCAAAAGTTAAGTAAGAAATGTTTTAAACAAGGCTTAAAGTACTCAAGTCAATTATAAAATTTATATCTTTTGCCTTTTACTTGAAGAAATCATGCTATAGAAATGGTTAATGTGCTTCTAATAAATGGAAGTATTGTAGCTGGAATGTGATACATG-TAACAGTTTAAGTTCCC--ATTGAAG-----GTATAAAATG-ATGAATTGTTGTAAGAC--TTAGACACTGAGTCTCAGTCTGGAGCTGATGAAGATGTTGAGATAACAGCCAGCTTTATCTCAACAGGGT--TTGTGACCC-----ACAAGTTTGGGCCACAGAG-------------------AAAATTG---AAGCAATTTGCATGTTATGACAACCTCAGTGGGAAGTGAAAATCAGC-TGACTCAAAACAACAAACAACAACCAACCAGACCCAAGTCACAGTTGCACCTATTCAAAA------CTAG----------CTTTAAAGTGAGCTATTTTTAAACTTCATAAAAATATTCATGAT---------TTTATTAGTTTGAATATTTCTACAAGATTCGGGTGGGCTTTTCCTTTAGGTGAAAACAGCTATCCACTCCTGTGGCCTTATAACTCAGGAAATGCTGGGGATGCAAACGTGCAAAAGGCAGGGGGAAGCTGCCCAGGCTGAGACTGGAGCAGCTAGGAGTGTGCTTGGGGAACGGGAGCTGAGATCCCGGAGCAGAAATGGTCAGCCGTGCTCTGGAGCAGGCCTGTCGGAGCCATCAGGATGCCGGGACTAGCACTGCAGCTTGCGGATGCTGCGGGAGATGCGCTTGAACTCTCTCTGCCCCTTCTGCCACCGCTTCACCGAGGTGATCACCAGCTCCCCACCCTGTTTCTGTCCCATGACCAGATAGGGCGCGTTGATGTCGTTCATCTCCTCACAGGTGCACTGCAAGCTGTCTTTGAGCCACAGCACCGATTTCTTCAGGTCCCTTTCGGACACACCGTTCAGCTTGTAAATGGTCTTGCTCTTGGTCTCCAGGATGATTTTGGTATCTCGGTTGATGTAGGTTATCTCCTTCACTTTTATTTTCAGTGCTA------TGAGGGAGGGCAGAAAGAGTCATGCCAGTTATAATGAGGGAATACAGTATACCTCCCCCCATTC-TGCCAACTCGTGTGACTTGGCCTGGATGAGGAAAGAGAGGCTTCCTAGAGCTAATGGGACCCTCAGAGGCTGCAGATCGGGGGTTGGGAGCTAGGGGCAGCAGGTGGCTCCACTGCTAAAGCCTCAAAGCATTTGCCAGGCACTTGGTTTCCAATCAGCCATTTTTTCAAAACTCTCTCTTTGCGGGACTCAATTAACTTTTCTTCTCCTTTCCTCACTCACCCTTGTGTTT----------------GTAAGA--------AAGTTGCATGTGGTG----------TGTGCTCTCTCCAACA------------------------AATGACTTCCTCTGTTGGAAACTTAAGCATGAAAAGAAATG---------------CCTGACTTTTAGGTGAAATATGATCCCT-CTGTGGCCGTAAAGTT-TAAACTCAATTTATTATGC--AAGAGGTTTTTGGACAAACCTGTAAGGAAACTGTGTCACGCAATCATTGTT-----TTCTAAAGATCAGATTACAGGGAAGGAGAATTGATCTTACAGCTGCATTTGATTTGGTAAAGCAGGAGAAACAATATGCAAGTCTCTTTTTAA--CAGCACAACGTGGTTAGTCATAAAAGTGTTTTTCTGAAGACCTCATCCTTATATGCTCTCATTTGCCAGTCCAAGGCCA chr4 + 94230402 21143621 21143620 21145401 21143621 21143620 21145401 1781 AGACAATGGGAAAACTACCATGTAAAGTTTATATACAAGAATATAACATTTATCTGAAGTATTTACAAGGTTAATTAAAGCAATATTTT-ACAACTTTTTCAGGTTAGCCACTAGGTATGTTACAGTTAGGCTACAGATGGTTTAATTTGCAAAAT---AATAAGAAA----------AAAGTTGCATTCATATAAACCAGTTCCAAAACCTGTTTTGTTTTTGTTTTTTTT------------CTTAAGAAAAGGGCACAGTCTTTATGGTG---GAAAATACAGT----GGAAAATAAAACTTGAGAATAGTTAATATACCCTTACTGGTGCCTATGTATCACATGCAAGAGTTGTAACATGACCTTTATAAATTTAATAT-------------------------AGATGGCAAGCAATTTCACCTCAGTGAAATAGTCGTACCCCTTGTGACAAGCCAGTGGCACACGTCTGTCTTTCTTTGTTTCCTACTTTTGCACAACAAACATGCATGTATACAGAGAGGCAGCAATATAAATGAACCAGCATTACCAAAATGAAGAGGGAAAAACC--TCAGATAAGAGTCACATTTGCAACCATTAAAAAAACAAACAAGAAAAAAAAACCTGTTAAGTGAGATAGTTTAATACTTCCCCCAAATAGTCATGATATATATATTTTTATTACATTTAACCTATGTACAGAAACAAAGGGCTCTCCCCCTCTTGGAGA---------TTGGTTGCTGTG-TCTCCTGGC-CAGGGCAT-CTCGAGGTGTAGAGAGGCTAAAGAAAGAAGG---------------------------------------TTGGGGA---GGCCTCGAGAGCTTGGGTCAGAGGAGGC------TGCTGGAAGCCAACGCAGCCAAAGCCA--------------CTAACACTGCAGTTTGCGGATGCTGCGGGAGAACCGCTTAAAAGCTCGCTGCCCTTTCTGCCACCGCTTCAGTGAGGTGATCACCAGTTCCCCAGCTTGCTTTTGCCCCATCACCAAGTAGGGGACATTGATGTCATTCATCTCGTCACAGGTACACTGGAGGCCACCTTTGAGCCAGAGCACAATCTTCCTCAGATCCCTTTCAGTCAGCCCATTCAGCTTGTAGATGGTCTTGCTCTTTGTTTCAGGGGTGATCTTGGTATCCCCATTGATGTAGGCAATCTCCTTCACTTTTATCTTCAAGGCTAATACAGTGAGGGGAGGGGGGAAGGG-------GGTGAGAGGGAGAGAGATTAAGAGTTTTTTTCCCATTAGTGCACATAAAGGGGACCT-----------GGGGAGGGAGGTGCTCTATTGCTAATTAAACTGTCAGGGCTGACAGA----------------AGAGGCAGCAGGTGGCTCCATTTCTAAAGCCAGAAAGGGCATGCAAGTCATTTCAGTTTGAATCAACC------TTAGGGCTGAGGGTTTGGGGG----------TTTCTTTTCTCCTCTTCCCCCTCCCCCTTTTTTTTCCCCTTCCTTCCTACATTAATATTTTCTCCAGTTTGCAAACAGAGAGAGGACAGCTTTGCTATGTTAAGCAGCACTCCAGTTTTTGCTGGGACAGGATGTATTCCT------GAAACCCTAGAATATGAAGGGGTGGTGGGGAGGCGAGTACCTAAACCTAATCTGAAACCTGATCTCTGTTGCAGCTGAAAAGTTCTAAACTTAATTTATTAGGCTGGAGAGGATTTTAGGCAAACCTGGAAGGAAATGATATTTCACATACATTGTTGTTTCTTTGAAAGAATAGATCCCGTAGAGGGCAAATTGGTCCAACAGCTGCATTTGATTTGGTGAA--AAAAAGAGGGGGATACAAGACGCTTTTAGAATCTGTGGGGCAGATTTAGCTTTAGGAGGATTTATCTGAGTGC------------------AATTTGCCAGGCCAAAGCCA .:.x...:..x...x:.xx...........................::..........:........:x...::...............-.........xx....x.:.:....x....:......x..:......:xx................x---.:.......----------..:.:.xx.xx:.:x:..::..:..x:....::.:.x.:x...x:x....x:..------------..xx.....x..x:.xx..x:..x.::.:---.:..:..:x..----....x:.:.x..x..-x..:....x.x:.x...--.:..:x.-----....x.x...-.x..:....x::.x...--...x.x.:.x.:.x.-------------------------....::..:x..::..:.:....::::::.--.:..:x...-----.....::x.x.x....x:x-------------------.xxx...---..xx..:x.......xxxx.x.:xxx...:::x.x:x:x:..:....-.x..:x...xx..x.::x..x....--:....:xx:.......x.....x.:...x....------.x..----------..x.x.......x..x...x.x.....x:xx.....x.......---------.......xx..x..:x.x.x....::.x:x::.x.xx..:::...:.x..x..---------.:x::.x.....-:..:x.::.-....:x..-..x.:.:..:.:.x:x..x....:x..::..---------------------------------------.......---..xx::....x.::..:x....::x..:------....xx:::x..:xx.x.:.::.....--------------...:........:...................xx.....:..xx...x......:................x:..............:......x.:..:..:..:.....x....::.....x:.:........:........x........:.....x.:..:::..........x.....x:x:...:....:........:.x..xx..:...........:..............x..:..x:..:....:........:.x:..........:x.................:....:x....------......::..x:.:...:.-------:..x.x.:x...:..:xx:.:x.xx::.:::......x-...xx.:xx:x.x...:.-----------..::..:....:x::...xx......x::..:x....:.x:x:....----------------..:.................:.x........xx....x::x...x..x..:..x:x..:x.....:..------.:.:::..xxxxx....x...----------:..:.:.......:.:.:.x...x.....x.x...----------------x...x.--------.:x.....x:::.x.----------.x....x.x.:x.:..------------------------:...xx.....------.....::x..x..:x:...:::..---------------...:.x::.x.xx.....:x.....:..-:..::..:.x......-......:.........x..--:.....x....:.:........x.......:x:.:.:x.:..xx.......-----..:x.....x:....:x.:x:..:..x:.....:..:x....................:..--.::.::.:x::x..:....x.x.....x:.--.x.::x::.:x:x....::x..::..x:...x.....:x:.------------------x.........x....:.... 89M1D66M3D9M10D54M12D29M3D11M4D15M1I17M2I7M5I10M1I17M2I15M25D30M2I9M5I19M19I7M3I47M1I25M2D33M6I4M10I44M9I53M9D12M1D9M1D8M1D31M39D7M3D28M6D27M14D308M6I19M7D38M1I18M11D47M16D68M6D21M10D35M16I6M8I15M10I16M24I11M6D24M15I28M1I16M1I19M2I51M5I61M2D30M2I41M18D20M 1104/1624 68.0% 1781/94230402 0.0% 367/1624 22.6% 132636964 57577591 +3013 chr4 + 190214555 153785502 153785501 153785580 79 TGCACATGTTAAGTAATCAAAAGAAAATAGAACTCGGGATTATGCCTGTCGGCAAAAAAAAAAAAAAAAAAAAAGGGAT chr4 + 94230402 43797137 43797136 43797215 43797137 43797136 43797215 79 TGAATATGTCAAGGAAAAGAGAGAGAATGGGATTCGTGCATATATAGATTAAGGAAAAAAAAAAAAAAGAGAGAGGGAT ..x.:....:...x..xx:.:...:...:.:.:...x.xx...::xx:.:::x:..............:.:.:...... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 109988365 80226190 +7976 chr4 + 190214555 153785761 153785760 153786037 277 CCCAACCTTTATCTAGCAACATCATAATGATTTGCACCTTGAAGTTTTACTGGTAAATAAAACTTCTGAATGTGAAATCTGTTGTTGTTGTTGTATTACTTACCAAAATCATTTTTACAAAGCGTTTCCATTATGTCGTTGTCATCATCATTTTTATTTTTGCAGGCTTCACATACCTTTGGAGCTAGAAATGTGAAAAACAGTCTTTAGTAAGTTTGCTTAAAAGAGAACAGTAGGTGGCGTTTGTAAACAACTC-----AAAGGGACTTATCCAGACAAA chr4 + 94230402 21146016 21146015 21146292 21146016 21146015 21146292 277 CCCTGCCTTTATTCAGGCGCGTCTCTCTGACTC-CACCG-GGAGTTTTACTCTTGCTCCTAATCCCTCAAGTTTTAATCGAGGGGCTCTGCTGC--CACTTACCAAAGTCATTTTTGCAGAGGTTTTCCATGATGTCGTTATCATCCTCATTTTTGTTCTTGCAGGCATCGCAGACTTTGGGTGCTGGAAATACAAGGGACAGTCCTTGTCAGACTCAAGGAGAAAGGAACAGCAGGTGGC-TTTGGGAACCCTTCGCGGAAACATGGCTTTTCCAGCCAGA ...x:.......::..xx:.:..x:xx...:.:-....x-.:.........xx.:xx:xx..:::..x..xx.xx....x:xx.x:x:..:..:--:..........:........:..:..xx.......x........:.....x........:..:........x..:..x..:..x..x...:.....:::.:::......:..:x:.:::.::xxx.:..::......:.......-....x:...xx:..-----..x:x.:...x.....x..:. 33M1D5M1D54M2D145M1D14M5I21M 178/272 65.4% 277/94230402 0.0% 10/272 3.7% 132639745 57574810 +32245 chr4 + 190214555 153788241 153788240 153789241 1001 AAGCAGGGATGCACTGGGATGCG-TGGCAGGGGCGGGATCTCCTGGGAGCGTCTCAGCCCAGCAGGGAGTGGGGAAGCAAGAGGGAAG-----GCTTACCTTCCTCGGTGGCTGGCAGGAGGTGGTCGCTGCTAGCGAGGGGGATGCAAAGGTCGTTGTCCTGGGGGAAACGGTCGCACTCAAGCATGTCGGGCCAGGGGAAGCCGAAGGCGGACATGACCGGGGCGCAGCGGTCCTTCACCTGCACGCAGAGCGAGTGGCATGGCTGGATGGTCTCGTCTAGGTCATCGAGGCAGACGGGGGCGAAGAGCGAGCACAGGAACTTCTTGGTGTCCGGGTGGCACTGCTTCATGACCAGCGGGATCCAAGCGCCGGCCTGCTCCAGCACCTCCTTCATGGTCTCGTGGCCCAGCAGGTTGGGCAGCCGCATGTTCTGGTATTCGATGCCGTGGCACAGCTGCAGGTTGGCAGGGATGGGCTTGCAATTGCTGCGCTTGTAGGAGAAGTCGGGCTGGCCAAAGAGGAAGAGCCCGCGCGCCGAGCCCAGGCAGCAGTGCGAGGCGAGGAAGAGCAGCAGCAGCGAGCCAGGGCCCTGCAGCATCGTGGGCGCGCGACCCCGAGGGGGCAGAGGGAGCGGAGCCGGGGAAGGGCGAGGCGGCCGGAGTTCGAGCTTGTCCCGGGCCCGCTCTCTTCGCTGGGTGCGACTCGGGGCCCCGAAAAGCTGGCAGCCGGCGGCTGGGGCGCGGAGAAGCGG-GACACCGGGAGGACAGCGCGGGCGAGGCGCTGCAAGCCCGCGCGCAGCTCCGGGGGGCTCCGACCCGGGGGAGCAGAATGAGCCGTTGCTGGGGCACAGCCAGAGTTTTCTTGGCCTTTTTTATGCAAATCTGGAGGGTGGGGGGAGCAAGGGAGGAGCCAATGAAGGGTAATCCGAGGAGGGCTGGTCACTACTTTCTGGGTCTGGTTTTGCGTTGAGAATGCCCCTCACGCGCTTGCTGGAAGGGAATTCT chr4 + 94230402 21146666 21146665 21147500 21146666 21146665 21147500 835 AGGCAGTGGTCCCCGGGGCTGGGATATCATGGAGGAAACCTCCTCGAA----CCTGACCGAGCAGTG---GACCCAGCATCAGGGCAGCCACCTCTTACCTTCCCTGGTGACTGGGAGGATGTGGTCACTGCTGGCCAGCGGGATGCAGAGGTCATTGTCCTTGGGGAAGCGGCTGCAGTCCAGCATGTCGGGCCAGGGGAAGCCGAAAGCAGACATCACTGGTGCACAGCTCTCCTTTACCTCCTCGCAGAGTGAGTGGCAGGGCTGGATGATCTCGTCCAGGTCGTCGATGCAGACAGGGGCAAAGAGGGAGCAGAGGAACTTCCTAGTATCGGGGTGACACTGCTTCTGCACCAGCGGGATCCAGGTGGAGGCCTGCTCCAGCACCTCCTGCACCGTCTCATGCCCCAGCAGGTTGGGCAGCCGCATGCTCTGGTACTCGATGCCTCGGCACAGCAGCATCGGGGCTGGGATGGGCTTGCAGTTGGAGCGCTTGTAGGAGAAGTCGGGCTCCCCGAAAGGGAAGAGCCCGGCGGTCGAACCCAG---GCACTGGGAGGC------CAGCAGGAGCAGGGCGCAGAGGCGGCACGGCATGG--------------CGGGGCGGTGGGCTGAGCGGAGT--------GCCGAGCGGGCTCCAGCTCAGGCT------------GCTCT----GCTGCGTG--------------------------ACCAACGG---------GGACGAACGGAGACTCTGAGAGA------------------------------------------------------------------------GGTGCAGGGGCA-AACGGGAGTTTTCTGGATGTTTTGTATGCAAATGAAAGGGGGAGCGGGGAGCGGGGAGGAGCTTGGTGACAGCCATCCGGAAAGGATTGGTCACTACTTTCTTGCTCTGCTTCCTCAGGGGGATT-----------GTTTTTTGGCAGGAAATCCT .:....x.:.x.x.x...x..x.-.:x..x..:x.::.:.....x.:.----.::::..x.....x.---.:xxx....xx....x..-----x..........::....:....x....x......:.....:..x..x........:.....:.......x......:...::...x..x..........................:..:.....x..:..x..:....xx.....:....x.x.......:........x.........:.......:.....:....x......:.....:.....x.....x.........:.:..:..x.....:.........xxx..............:.:.xx....................x..:x.....:..x........................:.......:........x:........x...xxxx...x..............:...xx.......................xx..:..::...........xxx.:...:.....---...x..x.....------x.....x.....x.x..x::...xx::.:....x.--------------..:..x..::.:xx........:--------.x....xx...:xx..:..::...------------.....----....x...--------------------------:..::...---------...x:.:...-...x.:.:...:------------------------------------------------------------------------.x...x......-.:.x:.........x.::x....x.........xx:::...x:.x...::xx:.........:x:xx:.x:.:x.....:::...::...............x.x....x..::x.:xx.:..x.-----------.:..x:...x...:...:.. 23M1I24M4D15M3D18M5I454M3D12M6D35M14D23M8D24M12D5M4D8M26D8M9D10M1I12M72D12M1D125M11D20M 620/828 74.9% 835/94230402 0.0% 180/828 21.7% 132641575 57572980 +3165 chr4 + 190214555 153793622 153793621 153793679 58 AAAAACAACAACCAAAAAAAAAAAAAAAAACAAAAAAAACCACACACACAAAAATCCT chr4 + 94230402 33976315 33976314 33976372 33976315 33976314 33976372 58 AAATGCACCTATTTAAAAAAAGAAAAAGAAAAACAAAAACCACACACAAAAAAACCCT ...x:..x.x.::x.......:.....:..x..x..............x.....:... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 119817307 70397248 +3077 chr4 + 190214555 153802420 153802419 153802486 67 GGTAGGAAGCAAGCAGGTTTAAGTACATTAAAAACAAACAAACAAACACAAAAAAACCGAAAGCCTG chr4 + 94230402 14725840 14725839 14725906 14725840 14725839 14725906 67 GGCAGGCAGCAAGCCCTGGGAAAGACTTAAAAAACAAACAAACAAACACAAAACAACCAACAAACTG ..:...x.......xxxxxx..:x..x.x........................x....:.x.:x... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 139076580 51137975 +20429 chr4 + 190214555 153824449 153824448 153824881 433 CACTGTGATGTTGGAAG-ATATTCTTTCATTCACAAGGCATTTGCAAGATCTATTATGTATGAAATTACTCACATGTAAATATTTTGTAGATGTAAAGCAAATTTGCTCCCTGCAAAATGGACCCAGT----------GGTGGGAACCAGTTTGAGGAGATGAGGCTGTATTTCCCTTCTCTAAGCATCACCAACAGAGCTGCTTA--ATCTGAGTCTGGAAGAGATCCAGTGGGATTTAGTTTTATGAGTTTTAATGTAAAGGTGTTGTATTTCATGAGATGAAATCATAACACAGTGGATT-GCAAGAATTTTGAGAGATTATTTTTTCAGAGTCTTGGCAAGCACCATCCTCTAGAGAATTTTGTGTCTAAAAAAGAAATATAGATATTCTTTAATAGGATTCACATGATAGCTAATCATTAATTCCTTCTAGATGGTCAGGGT chr4 + 94230402 21156202 21156201 21156643 21156202 21156201 21156643 442 CATTATGGTGTTCAAAGCATTCTTTTTCCTCCTTGAAGTATTTCTTAGACCAGTTAGGTGAGAAATTCATTATATGTGAGGATTTTGTAATAGCAAAGTGAATTAGCTGTTTGC-----GGACCTGCTTCCCTCTGTAAATGGGAACGTGCCATGCGACAGTGGGCCAGATTTTACTGTTCTAGGCATTACTGATATAGCTGTTTATTCTCTGAGCCTGGAAGAGATCCAGCAGGATTTAGTTTTATGAGGTTTAATGTAAAGGTGTTGTATTTCATGAGATGAAATCATAACACAGCGGGTTTGCAAGAATTCTGAAAGATTATTTTTTCAGAGTGTTGGCAAGCACAATTCTCCTGTGAATTACGTGTCTAAAAGAGAAATGTAGACCTTCTTTCATTGGGTTGAAATGATAAGTAATCCTTAATTCTTCCTAGATGGCCTGTGT ..:.:..:....x:...-..x:.:....x.:.x::.:.:....x:x...:.x:...x..:x......xx.:.:....:.:x........:xx.:....::....x...x::...-----.....::x.----------::.......xx.::xx:x..x.xx:...::x....:x..x:....:....:..::.:.x.....:...--x......:...............::.................x..............................................:..:..-.........:...:..................x...........x..:...:x.x.....x:..........:......:....:x......x..x..:..x.x......:x.....x.......:.:........:.x.x.. 17M1I96M5D9M10I68M2I95M1I143M 322/428 75.2% 442/94230402 0.0% 19/428 4.4% 132668247 57546308 +13726 chr4 + 190214555 153839270 153839269 153839813 544 AAAAAATTTCGAAACTGATTTTCCCAGTTGCAGAAGTTTC--TGGAAACTTGGATTGAAGA----------------GTCTGCATA--------CTTTGGTGGGCTTCTAGTT-AATGTATTGCG-TTGAACATAGATTTCTTGAACGAGTCACAGTAGTCTCTTATAAATCACAAAGAAAAGTTCATCCTCATTCTAGTTACAAGTCCTACGCCATGAATCAAATCTTAGCAAAGACCAGCTTAGAAATCTTGAAAAAGGCCTGACATTTTGTTAAAATGACAGGCAACTAGATTTCTCCTGCCCTCCCTCCTCACATTTCCTTTCCTTGTTCAACAACAGTACAATTTGTGTAGTGGTATTTTCAGTCTTCTTTTTCTAT-------------------------------ACTGAAAGTAATTT-TTTAAGCATGAA----ACTGGGTACTTTGTTGCCCCCATACAGAAAGACTTTACAGGTTTAGCTGGAATAGAGTTGAAGAGCACATAAAGTT--GATGTCAAGGCCTACTTACATTGA---AGTAAAATTAGATTTATGGATTGAAATGGGAAGCCTAATTTGTATGTGCCTCCTTCCTAAAAGC chr4 + 94230402 21162024 21162023 21162616 21162024 21162023 21162616 593 AGAAATTCTTGAAGCCCATTTCTCT--TTGCAAACCTCACATTGGTGATTAAGACTGAAGAATACTTTAAGCCTTTTGTCTACAAGGTACGTGTCTTATGTAGGCTTCTGTTTTAATTTACTGCACTTGTATGCAGGTTTTTCAAACTAGTCACAGTGGTCTCTTATAAATCACAAGAAATAGTCCACCCTCAATACCCTTTCCAGCCCTACACAATGAGCTGAGGCTTGTCAAAGACCATTTTAAAAATCTTGAATAA-ATCTGACATTATGTTGAGACAGCTGTTAAATATATTTCTTTTTTCC-----CCTCAGGTTTCCTTTCCCTCACTATGAACAATCCAATTGGTTTAGTGCTATTTTTAGCCTGACTTTTCAATTCAGTCATATGTATTCCTATCTTCCGTGAAAACTTAAGTTAGTTTATTCTAACATGAAAAATACTGGGAAAGTCTCTACCCCC-CACAAAAAGATTTTACAAGCTGAACTGGAGGCTGGCTGTTGCACATACACACTCCAGATGCCCAAGTCCAC---CATTAAAACAGTGAAATTGGATTTCAGGGT--------GCAGCCTGACTTTTACGCACCTTTTTCCTCATAAC .:...x.:.:...:.:x....::.:--.....:.xx.:x.--...x:.:.x:..:......----------------....:..x:--------...xx..:.......:x..-...x..:...:-...x.:::..:...:.::...x.........:..................::..x...:..:.....x.x:xx..x.x..:.....:.x....::::.:x...:x.........x:...:..........x..-::........x....:.:.:::.x.x:..x..x......::.x:..-----.....x:..........:.xx::.xx....:.x.....x..x.....x......:..:..xx:.....x..-------------------------------...x..:x..:...-..:x.:......----......x.xx.:x:.:.....-:...:.....:......:.:.x.:.....:xxx:.:..xx.x:..:.:.x.x.:--....:.x.:.:.:..---....:.---...:.....:.....xx..:.--------.x.....:.:..x..:.::...::.....x.x.:. 25M2D13M2I19M16I9M8I19M1I11M1I133M1D46M5D71M31I14M1I12M4I21M1D54M2I15M3D6M3I21M8D35M 359/524 68.5% 593/94230402 0.0% 89/524 17.0% 132677246 57537309 +3021 chr4 + 190214555 153876306 153876305 153876373 68 TCTCAGTGTACATTTTCACTTGGAAGCAATGTTTTTTTTGTTTGTTTGTTTTTGCTTTTTTTTTTTTT chr4 + 94230402 48148513 48148512 48148580 48148513 48148512 48148580 68 TTTCAGGGTAGTTTGTTATTTGTTGTATATATTTTTTTTGTTTGGTTGTTTTTTCTTTTTTTTTCATT .:....x...xx..x.:.:...xx:xxx..:.............x........x..........:x.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 105727793 84486762 +10089 chr4 + 190214555 153890547 153890546 153891073 527 TTTTGTAAAGAAACTGTTTATGTACCTTCAA-CACTTT-AAGGCATCATTTGGGGCG-TATTACCTTACAGGTGATTTACGTTTTCTGTTTAGTATCACTTCTGCTCCTTAGTCTGTGAAAGGAGGCTGAATGGAGAATTTTTTCCAGGCTTGCAGCTTTCTGCTGCTTAAGCCTGTAGAAATACTCCATGTATTTGGAAGTGTGCTGCTAGGGGAATAACAGTTTTTAGACTGCTGACTTGTCCATCGTTTATCATCATTATATGGTGTCTGTCAACAGAAAACCATTTCTCAGAATTCCACAAGGAGTCATTCCATATAGAAGTATGG-----AGTCTTGTGACAAGAAAAAGGCATTGCAATGGAAAGTAATAAGAAAGGGGGTGGAGGGATAAACAGAAGCTTTTAGAGCTAATTCATGGCTGGCGTCATCTCCATTAGCATTGGGACTGTTTGACAT-TGAGTTCAGAGAACACGACCAGGGCTGGTGTCCATCTGTCACGGTGATTAATGGGAGTATTGTTAGGTAATAA chr4 + 94230402 21180195 21180194 21180675 21180195 21180194 21180675 481 ttTTGTAAGTAAAGTATTTAAGTATATTTAAGTGCTTCCAAGACATCACCCAGGTCACTATTACCTCATACATGATGCACATTTTCTGGCCTGTATCATTTGGTTTTCGTGGTGTAAGAAAGCCAGCTAA-------------TGCTAGATGAATGCTGTATGTTCACACAGACTGTA-----CCTCCAGGTCTT------------------------GTAGCTTTGTGCCTGCTTTCTTGTCTATCATTTATCACCATTAGTGTGTGTCTGCTAACAAGGAAT-ATTCAGCTGAATCACAGGAGGGGCTGCCT------AAAGTTTTGCCACCAGATTCATGAGGAGGAAAAGGA--TGGAACAGAGGTGAATAATCTTAAGGAGTGAGGAATAAACAGAGACTTTTGATTGTAATTCCTGGCTGTCATCATCCTAATTAGCAATGGGTCTACTTCTTGTCTCAGTTCAGAGACTGTGAATAGTGCTGCTTTGTGTCTGTCACGGTGATTAAT----GTATTTCTTGGTAATAA ........:x...x.:....x...:x..:..-::...:-...:.....::::..x.:-........:.:.x:....x:..:.......x::x......:..xxx:.:.x.:..x.:x.....xx:...:.-------------.x.x:.x.x:xx...x.x..:.xx:xx..x.....-----x.....x..x..------------------------::..:...xx.x.....xx......:...:.......:.....xxxx.......::....:::..:-...:xx.x....:x..x:...:.::::::------:....x.x.-----..x:.::...x:..:......x--..x..::..::xx.....xxxx::..:xx....:.........::.....::xxx......x......x.:.....::x.......x....x..::..xx::.-.x..........x:::..x:..x....x.x.x::..................----.....x:.x........ 31M1I6M1I18M1I72M13D35M5D12M24D66M1D29M6D9M5I22M2D103M1I52M4D17M 307/472 65.0% 481/94230402 0.0% 64/472 13.6% 132710352 57504203 +3559 chr4 + 190214555 153926370 153926369 153926438 69 CTGTATGACCTTGGACAAGTCATTTAGCCTCTCTATGCCTCAATTTCCTTATATGTGAAATGGGGATGA chr4 + 94230402 33474158 33474157 33474222 33474158 33474157 33474222 65 CTGTATGGCCTCAGGGAAGTCATTTAGCTTCTCTGTACCTCAGTTCT----TCTGTAAAATGGAGATAA .......:...::.:x............:.....:.:.....:..::----.x...:......:...:. 47M4D18M 50/65 76.9% 65/94230402 0.0% 4/65 6.2% 120452212 69762343 +3404 chr4 + 190214555 153926624 153926623 153926696 73 TGCGCCTGTAATCCCAGCAACTTGGGAGGCTGAGGCATGAGAATCGTTTGAACCTGAGAGGTGAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.....x.....::........x.x..x...x.::.......::::..x.xx:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 77893419 NA +10675 chr4 + 190214555 153950737 153950736 153950933 197 CTGCATGCCTGACCTCAGTTCATTGATCTCTGAGCATGCCCATTCTCTTCATAAA-GCACCTTTGTTTTCTACCCAGTGCACAAACATCACGACCCGTGTCTGAGAATGTTGGGAATTTTATTAGGTCCATAAAGTTTTAGCTGTGGTCTAGTCCACCGAGGCCAAAATAAATAAATAGAGAGAGTGTAA-AAGTAACA chr4 + 94230402 21214321 21214320 21214519 21214321 21214320 21214519 199 CTTTATGCCTTGCCTGAGCTCAAGCATCCTTAAGTACTTCCAGTCTTCTCATAAATACACCTTTGTATTCTGCCTATTATATAAATATCATGACCCATGTCTGAGAATGTTGGGAATTTTATTAGGTTCATAAAGTTTTAGTTGTGGTCAAGGCCAATGGGTCCAAAATAAATAAACACAGAGAGCAAAATGGGTAACA ..x:......x:...x..:...xxx...::.:..:.:x:...x...::.......-:.........x....:..:.x.::.:...:....:.....:..............................:.............:.......x..x...x:.:.x..............:.x......::x..-::...... 55M1I134M1I8M 152/197 77.2% 199/94230402 0.0% 2/197 1.0% 132736416 57478139 +3147 chr4 + 190214555 153952994 153952993 153953067 74 GCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.::.x....:.:...........::........x.xx.x...x.:......:.::.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 77919790 NA +3211 chr4 + 190214555 153968147 153968146 153968211 65 GAGCACAATTTATTTTCTTGCTAGCCTTCTCTTTCTTTTTCTTTAGTCCTTCCAAATTTCCTTTC chr4 + 94230402 68743106 68743105 68743170 68743106 68743105 68743170 65 GAGAACAATTTCTTTTCCTGCTGGCCTAAGTTTTTTTTTTCTTTCTTTCTTCCAGAATCACCTTC ...x.......x.....:....:....xxx:...:.........xx.:......:.x.:x.:... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 85225041 NA +4269 chr4 + 190214555 153990710 153990709 153990871 162 ATTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCGTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTGTTTTCTTTCTTTCTTT----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTATCTTCCTT chr4 + 94230402 50176265 50176264 50176426 50176265 50176264 50176426 162 ATTTTCTGTCTCACTG-----CTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .......x...:x..x-----.::.....:.......:x.:..::.x:.::.x.x..x:.:::.::x...:..x:x.:.x.:.....:.............:----.::x.:.:.::x:......x::.:...::.........-:..:x.::...x:..x.:.... 16M5D81M4I38M1I22M 98/157 62.4% 162/94230402 0.0% 10/157 6.4% 103814445 86400110 +3096 chr4 + 190214555 153990757 153990756 153990837 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.:..xx:..:.x.:.........:...::...x.....x..xx:.x..... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 96618728 93595827 +3360 chr4 + 190214555 153990761 153990760 153990841 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:......:::.....x:.x..x.:.........:...::...x.....x..xx:.x..... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 96618732 93595823 +3052 chr4 + 190214555 153990765 153990764 153990845 81 TTCCTTCCTTCCTTCCTTCCTTCCTTCTTTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:...:::.:x.:...x:.:.......::x...xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 96618736 93595819 +3125 chr4 + 190214555 154001908 154001907 154001967 60 AAAAAAAAAAAAAAAAAACAAAAAAAAAAACTCTCTCTCTTTATATATATATGTATATAT chr4 + 94230402 89364885 89364884 89364944 89364885 89364884 89364944 60 AGAAAAAAAAAACAAAACAACAAAAAAAAAGATTCTCTATTTCCAGATATATATATATAT .:..........x....xx.x.........xx:.....x...x:.x......:....... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 64637023 NA +3753 chr4 + 190214555 154001908 154001907 154001965 58 AAAAAAAAAAAAAAAAAACAAAAAAAAAAACTCTCTCTCTTTATATATATATGTATAT chr4 + 94230402 89364887 89364886 89364944 89364887 89364886 89364944 58 AAAAAAAAAACAAAACAACAAAAAAAAAGATTCTCTATTTCCAGATATATATATATAT ..........x....x............:.:.....x.:.::.x........:..... 58M 48/58 82.8% 58/94230402 0.0% 0/58 0.0% 64637021 NA +3152 chr4 + 190214555 154001960 154001959 154002040 81 GTATATATACATATATATATATACATATATATATGTATATATATATGTATATATATATATATATATATGTATATATATCAG chr4 + 94230402 46063288 46063287 46063367 46063288 46063287 46063367 80 GCACATTTAC-CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAG .:.:..x...-:...:..:.:.....:.:...:x.:.:..:.x:......:.x......:......:xxx.......:x.. 10M1D70M 55/80 68.8% 80/94230402 0.0% 1/80 1.2% 107938672 82275883 +3023 chr4 + 190214555 154002921 154002920 154002973 53 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCA chr4 + 94230402 79265519 79265518 79265571 79265519 79265518 79265571 53 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCA .............::........xx...:.:.:.:::.:..:.:..:.:.... 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 74737402 NA +15856 chr4 + 190214555 154009563 154009562 154009985 423 TTTCTGCCCTTGATCTCTGGCTCTGGAGGTGACTGGGATAATTGAGGCCTTATGCCCCACTCCC-CGAAGACTGGTTTTGGCACATATGCAACCTGCATTTTAATATTATTCCTTATGACTGGAAGCATTTGGAAGGAGTCCTTGCCCCTGGTTTTAAAAGGTGGCATTATTTTATGAACATTTAGACATTGATTAATAAAATTCCGAACCCATTAACT-AATGGGGAAATGCCAAACTTTTTTGCGT------ATCCGAGAAAGTAAATGTAAT--AAAAACTATCCCAAAAGGTAAGTTAAATTATAGTCTTTGCTTTTTCTCTCCTGATAGTCCCACCAGATGTTTTTCAAATGCAGGACACAGGCCCTTTTTTCTGTTTTCTCCAGGGAAAGAAGACAGAAAGCTTGGCTCAGCTATGCTAACTTTCAG chr4 + 94230402 21232702 21232701 21233132 21232702 21232701 21233132 431 TTTTTGGCCTTGATCTCTGGCTCTGAAGTTAACTGGGATAATTCAGAGTTCACACCCATCTCCCTCAGGGGTTGGTTTAAAAATACATGTAATGTGAGTTTGAAAATTATTTCTTTTGATTGGAAGTATTTGGAAATGTTCCTCTCTGCTGGTTTTAAAAGGTGTCATTTTTTTATGAATGCTGAGACATTGATTAATAAAATTCCGAAAGCATTAACTCAATTGAGCCAACTCCTTTTTTTTTTCTTATTATAATTCATGAAAATAAATGCCATAAAAAAAAAATCCCAGCAGTTCTGTTAAACTGTATCCTCAACAGGCTTCTTCCTGATGGCCTTACCAGATGTTTTAC-AATGCTGGAGGCA-GTGCTGCTGGCTCTTTTCTCAAAGGACAGACAAGCAAAGTCTTGGCTCAGCACTGTGAGCCATCAG ...:..x..................:..x.:............x..:x:.:.::...xx.....-.:::.::......x::x.:.:...:..:x..x:...x..x......:...x...:......:........:x:x....:x.:x................x....x.........:::.x.........................xx........-...x.:.xx.xx:.xxx:......x.x.------..:.:x....:......:x..--.....xx......:x..x.xx......:.:..x:..:x:.xxx:.:::.......:.:.::............x.-.....x...x:..-.:x..x:.xx..x.......x.:...x...x:.xx:..:x...........xx..:x.:.:x.... 64M1I154M1I28M6I21M2I75M1D13M1D66M 297/421 70.5% 431/94230402 0.0% 12/421 2.9% 132776861 57437694 +3025 chr4 + 190214555 154011350 154011349 154011424 75 AACGAGACTCCATCTCAAAAAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 41975872 41975871 41975946 41975872 41975871 41975946 75 AACAGAACCACACTACTGATAAATATATCCAGATTAAACAAACAAACAAAAAAAAAACAGAGAGAGAGAAAAAAA ...:::..:x..::x.x:.x...:xx.x...:.::......:...:...........x.:.:.:.:.:....... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 112035478 78179077 +3281 chr4 + 190214555 154013989 154013988 154014080 92 ATTTTTTTTTCATTCTATATAAGGAATTTGGGCAATGCCCCAATTTTTTATCTTAAAAAATTTCTTTTTTAAGATAAAAAAGAAAAAAATAA chr4 + 94230402 80996354 80996353 80996441 80996354 80996353 80996441 88 ATTTTAATTTCACTCCAAGCGCTGCATTT----AAAATCCTGACCTTTTACCTTAAAAAATTTCTTTTCTTTAATAAATAAGTAAAGGATAA .....xx.....:..:.x:::xx.x....----..x::..::.::.....:.................:.xx:.....x...x...::.... 29M4D59M 61/88 69.3% 88/94230402 0.0% 4/88 4.5% 73017635 NA +12086 chr4 + 190214555 154014913 154014912 154015279 367 ACCACAGCACTATTTTCAGCCTTT-CAGGCTATCAGGCAC-CAGAGTGTTTAAAGTTTTAATAGGCTTA-----------GAGGTGACTCTAGAGTCCACCAACATCTGCATTCATCTGTAATTTATGGCTGCCTCTTATTTAGTTGGTTTAGTAAATTGTACCTAAGAGTATTCTTTGAGACTT-GGCAGCCTGGTGTACAGTTTCACGATTCAGCTGTGTTTTTGCCAACTATTTGGCT---------------------TTTTTTTTTTCTCTTGGATGACATTCTC----------AAATACTTAATTTGGAGCTTTCGTCTGGAACACACTTTATCAGACACCTCTTG-TGTGCCAAAGACCCCTT--ATATTCTGTTAAGACTAACTTTCCACAAGCTAACACATTTAT chr4 + 94230402 21234799 21234798 21235205 21234799 21234798 21235205 407 ACTGCAGTACTTCTTACAACCTTCATTGAGAGTCAAGCATACAGAGTATTTA--GTTTTAATAGGCTAATTAGTTTCAATAGGATAATTCTGGAGTCCACCA---TCTGTGTGCATCCATAATTTATGAGCACATCTTTCTTGGTTGGTTCAGTAAATTGTAACTAAGAGTGT--TTTGAAACTTCGGCAGCTCCACCTAGAATTTCATGATTCACCTGTGTTTTTGCTAATACTTCGGttcttctccttttgtttcttttattttttctttcttttcaacccttttcCCTGTTGGATAGATGTTCTTAATTCAGAGTTTTGGTTTGGAATGTACTTTGTCACACACTTTTTTCTGTGCCAGA-ACCCTTTGCACACACTATTAAGGGTAACTTTCTAAATGATAATATTTTTAT ..::...:...x:..x..:....:-:x.:xx:...:...:-......:....--.............x.-----------::.:.:.:...:..........---....::.x....::.........:x::.x....x:..:.......:...........x........:.--.....:....-......::x::x..x.:.....:......x............:..:xx..:..:.---------------------......:.....:..x:.:xx:x...:.----------.x:.x.......::...:...x..:.....:::.....:...x....:.:..x-.......:.-....:..--.:.:x..:.....:x........:.x.x.x...:.:x..... 24M1I15M1I11M2D15M11I22M3D68M2D10M1I55M21I28M10I53M1I9M1D7M2I42M 261/359 72.7% 407/94230402 0.0% 56/359 15.6% 132780114 57434441 +3211 chr4 + 190214555 154020935 154020934 154021011 77 GAATACAGTTCAACCCACGACACAATCATATAT-----ATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 24792588 24792587 24792669 24792588 24792587 24792669 82 GAAAACAGTGTGAGAAAGAACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAA ...x.....x::.xxx.x:...x...:.:x...-----...................xx........x.........::.:. 33M5I44M 58/77 75.3% 82/94230402 0.0% 5/77 6.5% 129228347 60986208 +3017 chr4 + 190214555 154020966 154020965 154021004 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 129228340 60986215 +3329 chr4 + 190214555 154024821 154024820 154024887 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCACTTGAACCTGGGAGACAGGGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x..:x..........::.:..x:xx...:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 77991610 NA +3180 chr4 + 190214555 154028653 154028652 154028741 89 ACAAAATAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAGAAAGAAAGAAAATAGAGGAGAAAACCCACCAAAA chr4 + 94230402 31785823 31785822 31785911 31785823 31785822 31785911 89 ATGAAATAGGACACAGGATACAAACATGGGAGGAGATTTACAAGGAGAAAAAAAAAAAGAAAGAAAAAGGAAGATAAAACTAACCAGAA .::......x.x.x.::.x.x...x.x:::.::.:.xxx.x...:.....:...:............x:..:..x.....:x....:.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 122242830 67971725 +3393 chr4 + 190214555 154028665 154028664 154028789 125 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAGAAAGAAAGAAAATAGAGGAGAAAAC-CCACCAAAATCCAGATAACCAGTTTTTAAAATGGATAAAGGATTTGAATAGACATTT chr4 + 94230402 54037034 54037033 54037138 54037034 54037033 54037138 105 AAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAACTCCAATAATGCCCA---------------------CTAAAGattttaaataaatattt .....:................:x:..::xx..:..:x:.....x...:...:..x...x..:.x...-...x:..x::...---------------------x.....:x...:....:.:.... 68M1I13M21D23M 74/104 71.2% 105/94230402 0.0% 22/104 21.2% 99991631 90222924 +4123 chr4 + 190214555 154033324 154033323 154033401 78 TGGCACACGCTTATAGTCTCAGCTATTTGGAAGGCTGAGGCATATGAATCACTTGAACCCAGGAGGCAGAGGCTGTAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--.:....::......:...:.........x.x.:....x.............:..x:xx:........ 9M2D67M 59/76 77.6% 76/94230402 0.0% 2/76 2.6% 78000122 NA +12896 chr4 + 190214555 154035345 154035344 154035760 416 ATATTATCATATTTGGA--ATG---CAACTGGCTTAGGCTTGAGCTATCAAATGTTCAAATTCTCTGGTCCAAATAGTTTAAGTGGGATGGCTTTAATTCAA-AAGGCTCCCTTGCTTATTTTAATTAGGTAGAAGCAGAATTTAAGATGAGTTATT------CACTGATTGTTAACCAAGGAAGATGGCCCGAAGCACCACTCAGTTCCCAAGAATTTCTCAAGTGCTCTTTTCTGGCTGTGAAAACAGTATTTCACATCCAGGAAAAATATAGAGGGCTTATTTAGGGAAAATGATGCCTAGAAACTGTCAACTTTGTATCATCATAAACTATATAGAATATGAAAACAAAC--TGTCTAAATATGATTAT--ATGCATTCTTTGGTATGTGCATGTATAGATCTGTGTGTAATCAGGGGACCTCCATCC chr4 + 94230402 21241815 21241814 21242233 21241815 21241814 21242233 419 ATTTTATCATTTCTGAATGATGTCACAGCTGGTGTGAACTTTCA-TATCAGATATCAGCATTCCCCTGTCCAAATTCTTTCATGTGACTGGATTTGGTTAGAGAAGGCACTCTTGCTGAATTTAATTAGATAGAAACATAATTTAAGAGCAGATGATGCCAGGCCCTTCTCATTA-CCAAGGAAGATGGCCTGGAGCATTGCTCAGTGCCCAGGAGTCTCCACAGCACAGTTTTCTGGCTGAGAAAACAATATGCTACATCCAGGAAAAATATGAAGCTCACATCT----------GTGCCTAGAAACTGTCAAACTGGTATAATTATAAACTGTACTG-ATATAAAAACAAAAAGTGTCATAATTTAATTATGGGTGTTTTCCTTGGTTAGTGTAAGATGAGTTCTCTGAGGGATGTGAGGGTCTTTTTCC ..x.......x.:..:.--...---..:....:x.:::...xx:-.....:..:.:x:x....:.:x........xx...x.xxx.:x...x...::..x:.-.....x.:......x.x.........:.....:..x.........xx..x.:x.------.x..xx.::...-...............:.:....:::......x....:..:.:..:xx..::.xx...........x.......:...x::.................::..xx.x:..:.----------:.................x:.x....x..:.......:..:x.-....:........x--....xx...x.:.....--:..:x...:.....xx...:.x.xxx..x...x..x.x:..xx.:..::..::x... 17M2I3M3I19M1D57M1I54M6I12M1D110M10D43M1D14M2I17M2I57M 284/403 70.5% 419/94230402 0.0% 29/403 7.2% 132793530 57421025 +6091 chr4 + 190214555 154039133 154039132 154039742 610 TTCATTTTCCTATTTGTGGAT--TCATTTCTTCCTTTCATAGTTAGCTCAGTAAAACATTTGCTTTTAATAAGAAAAAGCGTTGCTTAAATATTTTTTTTTTGTCAAAACTTACAAGTTTATTTCTGGCATTTGCTTCTAGCAG---AGTTCATTAATTTACTATTGTCAGATTAATAGCCTTTTA-ATTAGCAGTTATTAATAT---AAAATGCAATCTTTATCCTCTCATCCAAGAAAAGAGAAAA-----ACTCATATATTTCATTTGTATTTTTTGGCCCTTTGCCATTTTGGTAGCGAAGAAAAAA------AATAAATGTATATGTTATAGTAAACACATTTGT---TGCATTACATTCTGGAGTATA-ACATCTGTATTTGTCTGTGTA-TGTGAGA----------AAATTATATATTGTTCACCTGGGTAGCAATTTGTGTTCTGGAAAAATCTTTAT------------------------TTGCTCTCAGGGGATC-CTGTTTAATATAATTACATTTAATTGATATTTGCGGTGGAGGATTAAGGCAAAAGGAACCGTCATTTAATATGCTTCAGGATTTTATAGGTCTTGTATTTCTTGGCTTGGTTTCCAAAATACATGTAACCACATTTTTTAAAGCTAGGTACTTAGATAAATT chr4 + 94230402 21258511 21258510 21259168 21258511 21258510 21259168 658 TCTATTTTCCGCTCTGAAACTCCTCAGTTAGCCACTTCAAATTCACCACACTTGAACATTTGCTTTCAATAAGAAAAAATGTTGATTAAAT-CAGTGTCCTGGCCAAATCTAGTAAGTTT-TCTCTGGCAATACCTTTAATGAGTCCCATTTATTAATTTTTTCCCCCTAGCGTACTTGTGTAACAGATTTCCAGATATTAGCATCAGGAAAGGCAATATTTGGCCTGTCATATGAGAAAAGTAAAAACAAGCAAGCACA-ATTCCTTTTGTAGAGC---ACCTCATGCTCTCCTAATACCTATGAAAAGATCATTTTGTGGAGCTAAGTGTTAAAGTATGCTGGTTTATATATG-ATTATGTACAAGCATGTATATGTTTACATACACATGTGTATTGTAACACATACCTTACAATCAAGAGACCACTGACCCATGCAGCCTTTTTATTTCTGGCAGATCCttcttctttttttttttttttttttCCCCTCTCTCTTATGGGATTGTTCTTTGATGTAATTAAGCTCAATTGATATATCCCTTGTGGTATTTTA--AAAAAGAGTCATCATTTTTTGAGCTTCA-AATATTATGAGTC-TGAGCATTTTGGCTTCAAATTAAAATGAAATTTGATTGTGCTTTTAAAATAT-TATGGCTAGATAAATT .::.......xx.:..x::x.--...x..xx:.x:....x.x.:.x.x..x.x:............:...........::....x......-:xx.x.::.x.:....x..x::......-.:.......x.xx...:x.xx..---x:..:........x:.x::x::..xx..x.x.:x.xx:.-...xx...x.....::..---:...x.....x...:x...x....x::.......x:....-----.xx..:.-...:.x......xxx:---:..::x...:x.::.::..x.x.x.....:.------x:.::.xx..x:.....x....x:.xx:...:.---..-....::.x.x:.x:.:..-.::.:.::..x:::x......-...:.x.----------..x:x.x.x.::::.x...::x.:...xx...xxx......x.:.x:...:x.------------------------.:x....:.x.....:-:.x...:..:......x::.:.........x.x.xx..x:.x...xx:--....:..::.:......xx.:x......-:..x....::...-..x::x.:.......x:xx.:x...xx.x..x.:.::::::....x...xx.-x:.:x:.......... 21M2I68M1D28M1D23M3I39M1I18M3I40M5I7M1D16M3D31M6I33M3I2M1D18M1I21M1I7M10I53M24I16M1I48M2D28M1D13M1D52M1D16M 367/598 61.4% 658/94230402 0.0% 72/598 12.0% 132780622 57433933 +3277 chr4 + 190214555 154077030 154077029 154077096 67 CAAACCCAAAAAAAACCCCACCACCACCACCACCGTCACCACCACCACCACCAACAACAAAAAACAA chr4 + 94230402 42911771 42911770 42911822 42911771 42911770 42911822 52 CAAATCCAAAAAAA---------------CCACCACCACCACCACCAACAACAACAACAAAAAACAA ....:.........---------------.....::...........x..x................ 14M15D38M 47/52 90.4% 52/94230402 0.0% 15/52 28.8% 111165259 79049296 +3011 chr4 + 190214555 154095346 154095345 154095420 75 ACACACACACACAGACACATACATATACATGTACATATACATATGTACGTGTGTGTATATACACATATACATATG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .......:.:x..x.::..x...:..:...::.x.x...::...:.x:............:..:::.:::.x:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 131495148 58719407 +3878 chr4 + 190214555 154095373 154095372 154095471 99 CATGTACATATACATATGTACGTGTGTGTATATACACATAT--------------------------ACATATGTACGTGTGTGTATATACACATATACATATGTACATATGCGTACATATATAT chr4 + 94230402 68837026 68837025 68837150 68837026 68837025 68837150 125 CATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .....::.........::...:.::x.::.:.:....::.x--------------------------..:.:..:::........:..:.....x.......::....:....::....x.x... 41M26I58M 69/99 69.7% 125/94230402 0.0% 26/99 26.3% 85258347 NA +3887 chr4 + 190214555 154095434 154095433 154095502 69 ATACACATATACATATGTA--CATATGCGTACATATATATGTACATATGTGTGTGTATATACACACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:........x..:...:.--..:....:....x.x.......:..x.............:..::...:.. 19M2I50M 55/69 79.7% 71/94230402 0.0% 2/69 2.9% 131495236 58719319 +3059 chr4 + 190214555 154095464 154095463 154095534 71 ATATATATGTACATATGTGTGTGTATATACACACACATACATATATGTGTGTGTGTATATATATACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.:..:.x..:...::x::::..::.:...x.x...::.....x.............::..:...:.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 131495266 58719289 +3657 chr4 + 190214555 154101212 154101211 154101292 81 CCTGCAGGCACGAGGGGCCAAAGACCAATTTGCTGTAATGAATTTAATATGTTTAGTCTGAGCCATATAATTCCAGGCCAA chr4 + 94230402 21272492 21272491 21272572 21272492 21272491 21272572 81 CCTCAAGTCACCACAGAACGTGAGCTAATTTGCTGTAATTCATTTAATATGTTTAGTCCGAGCAACACAATTTCAGCCTGA ...xx..x...x.x:.:x.:x:::.:.............xx.................:....x.:.:....:...x.::. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 132828720 57385835 +34374 chr4 + 190214555 154160822 154160821 154161918 1097 AATGGATTGGTCTGAGGCA-----GATTTTTAAAAATATACTGTTTTATCTACTCATAACAGAGTTAACAG--GTTTTGATGACTCTGGCCTTTTCTTTTTGCTCTGTGTATGTTGCCAGGCCAAATAACCTAGCTGTGTTGGAAACGAGTTTCAAATTACTTGCAGGTGGCTGGAGGCAGATGAAAGCTGCCATAGAGGTGTTCCTCATTCTATTCTCTAGTCCCCAGACTATCGGGCCATGTGCTGACACTTGGATGCTTGTTTTACAATATCATTTGACAAGTGGGATTTATGTGTCAAAATTTCAGTAGAAGCCAAGAAAATGTCAG--AGTAAGCAAAGAGAGGCAGCATGAGAAAAGGGGGAGGGGGCTGC-TTTTTAAACCCAGGAGTGTGTGAGTTAAACTGTGCCAAATCCCTACTCTGTATGAAACACACAGGGAGA---TTAACCTGGCTGCCAAAAACCCGAGATTTCTTTGGAGTGTTTTTGTGCAGTGCTGTTACTGCCTTTATCATTAAGGAAACAATGTAATAAAAATGAGACCTTTTCCCTGAATGCATTAATAAAGATAACTTATTGGTCCCGGTCC-CAAACCACTGGAGCCACATTTAATTTGCTGCGTTTATTGTTCTGGGCTCTGGTATACAGAGGTGCTCAGG--AGCACAGCAACATCACTGGAAGCACTGATAGAAAG-----GACAAAAGGAAAGGTTCCTGTTCTTACTTAGAATTTCCAAAATGCCCTAGTTACTAAATATTCATCAATCCTCCTAAATTTGTTTGAACTTTCCCCAAAGTTTTTATCTTATGGTTATTTTAAAAGGATTAAACACCTATACATATACACAAGTCCCCAAACCTTACCTGAAACTGTTAGAGTGTCCTATTAATTCCCACTTAAAATAACTTTTCCCCTA--TTCTTTTTTTTTGGTGTAGGGGAAGGAGAGGTGGCAAGAGATTGAATGTTTAAGTTTCTCTAAGCCGTGTGCTGTTGCTCACCATATTAAGAGCATGTGTGCATTACTTCATAAACTATCAGATGACATGCAACTTTATTTATACTCAGTAAAAAAGAATAATGAGTTACGTAAAGTTATTTCTGACACC chr4 + 94230402 21284780 21284779 21285809 21284780 21284779 21285809 1030 AATGGACTA-TCTGAGAAAATAAAGGTTTTGGAAAATAAAA-GATTTATCTACTTATTAGCAAGTCAACAAAAGCCATGAAGACTCTAAACTTCTGCTTTGGCTTTGTGTGCCTGAACAGGCCAAACAACCTAGCTTCATTTGAAACTGGTTTCAAATTACTTGCAGATGGCTGGATGTAGATGAAAGACTGCATAAAGGTGTTCCTTATTCTATTCTCTATTCCCTAGACTATTAGGCTATGTGCTGACACTTGGATGCTTGTTTTACAATATCATTTGACATGTGGGATTTATGTGTCAAAATTTCATTTAAAGCCAAGAAAATGTCAACTAGCAAATACAGAGAAGCAGTAAACGA--------------CTGTATGTTTCAAGACAGGAGTCAGTGAGTTGGACACTGCCAAGTTTCAGCCCTGTACCAAGCACACCAAGAAAAATTTGACCCAACTGTCAGCAAACTAAGATTCCTTTGGTGTGTTCTGATGAGATTCCATTACTGCCTTTATCATTAAGAAAATAATGTAAT-AAAATGAGACCTTTCCCCTGAATACATTCATAAAGATAACTTGTTGGTCAAGCTCCAAAAACCACAGGAGCCACATTTAATTTACTGTTTTTATGGATTTAAGATTTGGTTTGCTGCTATGTTCAGTCCACTGCAATAATATAATGGGAAATTGTAATGGCATATTTTTTAAATATGAAAGGGCTCATAATCTATCACTGAAGCTTTAAAACGCCTTATT---CAGACATCCATAA----------------TTAAAGGCTACCAAAA-----------ATGGTCATTTCACATGGTTT---CAC-----------CACAGCTCACCAAA----GCAGGATGGGGAGGGAAGACTCAAATAATC----ATTAATACAGCATTTTGTGCAAGTCACCTTATAATAACCTGGGGAAAAGAACTGTTAGAAGAGCTGTAAAG--------TCTTGCAACCCCCCTCTGTTGCTCCTCACCTTAAGAGCATCTGTGCATTAC------------CAGATGACATACTTCTTTATTTCCAATCAATAAAAAC-AACAGTGAGTTACATGAAGGTCCATCTGATGTC ......:.:-......:x.-----.:....x:......x.x-.x..........:..x.xx:...:....:--.::x...x......::x...:.x:...x...:.....::x.x:x.........:.........x::..x.....x:..................:........x.:.........x:xx....:..........:.............x....:.......::...:...........................................x.........................x.x:.................:--..:..::.x.....:....:.x:x..--------------...:-.x...x..xx.......xx.......::..xx......:.::.x:.:.....:x..:.....x::..:.---..:...:::...:..:x..x.::.....:......x.....:.x:..x::.x.::....................:...:........-..............:........:....x.............:......xx.x...-x.......x.................:...:x.....x.x.:.::.x.:....x.:.x.xx:..:....x--.x::..::..:..x.:x....::xx.:..:.x.x:-----x.x.x.x.:..:..:..x.:x...xx.x:x...x:.::....:...:..x.---:.:.:..:...x.----------------..:..xx:.x..x...-----------.....:....:.x.x..x..---...-----------....:x..x.....----:.xx..x:xx.xx:..:x:::.x.x....:----x....x.:.:.x...:x:x:.--.:x::..x.xx.:::x.:...:..:..:xx..x:x.....x.xx..x.--------...:xx.:..x:x:x.........x:..:x..........x..........------------..........:.xx........x:.x...:......x-..:.:........:.:...x.x:x.....:::. 9M1D9M5I17M1D29M2I258M2I26M14D4M1I69M3I88M1D56M1I70M2I35M5I51M3D13M16D16M11D20M3D3M11D14M4D30M4D21M2I48M8D51M12D37M1D33M 719/1007 71.4% 1030/94230402 0.0% 113/1007 11.2% 132876042 57338513 +3305 chr4 + 190214555 154165807 154165806 154165858 52 AAAGCCTGTATCTGCCAAAAAAAAAAAAAAAAAAGAAAAGAAATACACAAAA chr4 + 94230402 88375035 88375034 88375086 88375035 88375034 88375086 52 AAAACCCACATCTTCCAAAAAAAAAAAAAAAAAGGGAAAGAGGTGCACCAAA ...:..:::....x...................:.:.....::.:...x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 65790772 NA +6000 chr4 + 190214555 154189511 154189510 154189713 203 CATTTCCTCTCC---TTGGATAACAGTCACAGAAGCCACATGCCAATGTGCTGAGAGTCACATTTTCCATCAGCAGCATTTTGCTATTTGGAAAG-TCCTTAAGCAGTTGTGCCGGCTGCCTTGGAGTTACCTGCAATATGGCTCATGTGTTCCTCACAGACCGCCTGGGAAGCTTTGTTAGTCTCAGAGGCAT-TTATTAAATGTTT chr4 + 94230402 21289856 21289855 21290055 21289856 21289855 21290055 200 CAGTTCCTTTTCCTTTTGTATGGCAGTCACAGACTCCAGATGCCAAAGTACTGAGGCTAATTTTTTCCATCAGCAACATCCAGCTTTTTGGCAGGCTGCTCCAGCATTTCTGCTGGCTGCCTCAGAGC--ACTTCA--ATGGCAC---TGTTCTGTGAATATTGCCTAGGAAGCTGATTTA-CCTGGGTGGTATCTTAATCAATGTTT ..x.....:.:.---...x..::..........xx...x.......x..:.....:x.x.:x.............:...::x...x.....x.:.-.x..:x....x..x...:........::...:--x..x..--.....x.---.....:x::x.x.::....:.......xxx...-:..x:.x..:..-...x.x....... 12M3I80M1I32M2D6M2D7M3D33M1D12M1I13M 141/195 72.3% 200/94230402 0.0% 13/195 6.7% 132899655 57314900 +3015 chr4 + 190214555 154203449 154203448 154203516 68 CTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 6760476 6760475 6760543 6760476 6760475 6760543 68 CTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAAGCAAGCAAAAAAA ...:x.........x....x....x...x.......xxxxx....x.x:.......x...x...:... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 147442973 42771582 +3164 chr4 + 190214555 154203452 154203451 154203568 117 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGA-AAATATATTCATATAACCCTGATTTTGGTAAAACACATTTCTACATATTCATTT chr4 + 94230402 23738919 23738918 23739023 23738919 23738918 23739023 105 CATTTCAGACAAAAAAAAAAAACAACACAAAAATAAAAATAGAAAACTGATAGGAAGTAAATAGGAGTTTGTT-------------TTTTATTCAAATGCACATTTTCTTACTCATTT ...:...:.x............x..x.x.....x.....x.:....xx..x..:...x...x.-:.:.x.:..-------------....:x.x...::..:x.:.x.x..:...... 63M1I9M13D32M 74/104 71.2% 105/94230402 0.0% 14/104 13.5% 130464533 59750022 +3097 chr4 + 190214555 154203452 154203451 154203526 75 CATCTCAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAATATATTCAT chr4 + 94230402 1046807 1046806 1046884 1046807 1046806 1046884 78 CACCTTAATTCAAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAATCGTTTTCAT ..:..:..---....:.:.x.xx.......:......:........xx:.:...:..::.:...:...x::.x..... 8M3I67M 53/75 70.7% 78/94230402 0.0% 3/75 4.0% 153156645 37057910 +3191 chr4 + 190214555 154203477 154203476 154203532 56 AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAATATATTCATATAACC chr4 + 94230402 63725891 63725890 63725946 63725891 63725890 63725946 56 AAAAATCAAAACAAGATTAAAAAGAAAGAAAGAAAAGAAAATACACACACAAAACC .....xx....x..:.xx.........................:.:x..:.x.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 90477586 NA +11403 chr4 + 190214555 154203997 154203996 154204602 606 ACAACATTGTTTCATTATCAAAGAAAATAACATCTTTTGGGGGCTGTAAATACTCTGTGAGGACAAATGGATTTTCTAAAGGAGACTACTGACCATGTGTTAAACTATGACATTTCAATACACTTGTTTGATTGTTGGTCAAAAACATACTCAAAGGTAAACAACTTGAGCAAATAACAGGCAACTGAAGTTGACCATTTAAAGAGAGGGACAATGAGCATGAAAAATCAAGACGAATGCATTGCTTCAATTTCATAGACAACATGAATTAAACGCAAGCCACTGCCATTCTGCTTTAATTTAAATAAATCAAATGTTTTCACTGTCTCAGAAAACTAG---TTTTTTCAATAACATTTATGACATATTTT--TTCTTGGT--TTGTGCACCT---ATTTGGAAAAGCATCACCGAGAGAGTTGTTGGTTATGAAAAAATACAATTCCCTTAGCCATTTACTGGGCTACATCAGTTAGTGGAAAACAGATTTCTCAAGATAAATTGTTATTGGTCATTAAAAACATATAATGCTTCTCCTTAGACAGACTAAATTTATCTGAT--------ATGTTTGTATTCCAGGATGAAATCAGAAAAGTGACTGACGACAGGGAAACAGG chr4 + 94230402 21292361 21292360 21292946 21292361 21292360 21292946 586 ACAGTACTTTTTACATATCAAGAAAAATATCATCCCT----GTTTCTCAATGCTCAGTAAGAA-AAATGGCCTTGTTAGGAAGGAGTAGTGACTGTGTGATAGATGATGGAGTTTCAG--AGGTTGTTTAAT----------ACACAAACTTAACAGTAAACAAATTCAGTAAATAATGAGTAATTGATGTAGAGCATTTTTACTG-GAGACAAGAAGCATGAAAA-TCAAGATGAATACATTGCTTCAATTTCACAGACAATGTAAATTAGAAACAGGCTGCATACAT--TGTTTTAACTCAGG-GAATAAAATGTTATTATTGTCT--AAAAACTAGATTTATTTTCAATAACGCTCAAACCCTGTTTTTCTTCCTGATAGCCATTTCCCTGAAATTTTCAGGAGT-------AGGGAGTAGCTATCT-TAAATATAGGCATTTAATTTTGTTACTTTGTTGGCT--GTGAGACAGCAAACAATAACGTTCTTGCTATTAATTGAGA---GTTAGAGAAAAGATGCAATGGATCAACTCAGGCACCTCAAATCAATCTTCTAGCGTTTAACATTTGT-TTTGGAAATGTAACTTTGCAAGTGATTGATAAGAGGAAAATTGG ...::.:.x...xxx......::......x....::.----.x:.x.x...:...x..:..:.-......x:..x:..:::::..x..x....::....x..:.:x...:x:.....:--x:x......:..----------.x...x...:..x:........x..x..:......:::.:..:...x..x..x.....xx.xx.-.:.....x:..........-......:....:................:......::.:.....:.x:..:..::.xxx...--..:.....:.:.::-:...x.......x.:.:.....--:........---.x...........::.:.x:x.x.:....--...:..:.--:::.x:x...---....xx.::..:-------..:....x.:.:x:.-.:..x.x.x:..x..xx:..x.::.:..xx.x....--:.x..x:..:::.x..:.:xx....::xx..x.....xx.---..:.xx:....x..::....xx..xx..:..:..xx::....:x....xx.--------.::.....-..:x:::...x..::xx:x......:...::.x...:...:x.. 37M4D22M1D54M2D12M10D64M1D19M1D62M2D14M1D22M2D9M3I29M2I8M2I10M3I12M7D15M1D36M2D40M3D51M8I8M1D44M 369/568 65.0% 586/94230402 0.0% 56/568 9.9% 132911636 57302919 +3233 chr4 + 190214555 154206031 154206030 154206124 94 CCTTCACTGTCATTTTCATCCTTGATTTATCTGTTTTCTTCAATGGAATTTTTGTTTGTTTTTGTTGTTTTTGTTTGTTTGTTTGTTTGTTTTT chr4 + 94230402 28945629 28945628 28945711 28945629 28945628 28945711 83 CTTTCCTCTTCTATTTCACTTTAGGTTTCATTGCCTT-----------TTTTTGTGTGTGTTTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTTT .:...x::x..xx.....:::.x.:...xx:..::..-----------.......x...x.........x.....xx................. 37M11D46M 61/83 73.5% 83/94230402 0.0% 11/83 13.3% 125260402 64954153 +3082 chr4 + 190214555 154206069 154206068 154206126 58 TTCAATGGAATTTTTGTTTGTTTTTGTTGTTTTTGTTTGTTTGTTTGTTTGTTTTTGA chr4 + 94230402 66001573 66001572 66001630 66001573 66001572 66001630 58 TTTAAGATAGCTTATGTTTGTTGTTGTTGTTGTTGAGTTTTTGTTTGTTTGTTTTTAA ..:..x:x.::..x........x........x...xx.x.................:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 88204496 NA +3284 chr4 + 190214555 154206077 154206076 154206132 56 AATTTTTGTTTGTTTTTGTTGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGA chr4 + 94230402 29820403 29820402 29820458 29820403 29820402 29820458 56 AATTTTTGTTGGTGGTGGTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTAATTCAAA ..........x..xx.x..x......x.....................:.xx..:. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 124385674 65828881 +3046 chr4 + 190214555 154219928 154219927 154219990 63 CCCTCCCTCCTCCCACCCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCT-TCCTTCCTTCCTTCC chr4 + 94230402 25163655 25163654 25163718 25163655 25163654 25163718 64 CCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ...:.x.:..:x.:x..:......:..x...x......:...:.....-.......:..:::.. 48M1I15M 46/63 73.0% 64/94230402 0.0% 1/63 1.6% 129056273 61158282 +19482 chr4 + 190214555 154231887 154231886 154232283 397 TTCTTTTTCTTTGCCCAGGAATCTGTTTTGGAAGCCAATTCAATGATTACTACTAGGACATGGAATTTTGATATCCATTTGGTACTGATTTACACCAGTATTTTTAAGGCTGCCAACAAGAAAGTCCAGAATTTCATCAGGCAGCCAAAATTCCACAAGAGACAACTGTCTTTTATTTTATAGCTTATGAATTTGGGGCTTAATATGATTTTCCACTAACAAGTTCTGTACCCCCTCCAGAGTGCTAAAGCCAGTGCATAGATCAGCAAAGTAACCCAGAACATATGAGGCAAGTTAATATTAAACTTGAAGGAAAAATGTACAAATTATAT--TGTTTACTTAGGAAAAAAAGCACTCTAGTTGAAAGAGCTGACATACGATTTATTGCAAACACTTA chr4 + 94230402 21311021 21311020 21311402 21311021 21311020 21311402 382 TTTCTCCTCTTTGCCCAGGAATCTGCTT-AAATATCAGTTTAATGATTACTACTGGTAGATGGAATTGGGAAATCCATTTGGTAGTGATTTACACCAGCGTCTTCAAGGCTGCCAACAAGAAA-TCCAGAA----GGCAGACAGCCAAAATTCCAGAAAAGACAACTGTC-----TTTTACAGCTTATGCATTTTGAGCTTAATATGATTTTCCACTAACAAGTTCCGTACCTTCTATGAAGTGCTAAAACTGGTATGCAGAATTGCACAGTAA--CAGCCCTTTCAATGCAAGCTAATACTAAACTC-ATGGTAAATTATGGATGTTATATACTGCTTACTTAGGAAAAAAACCAGTAAGGTTAAAAGAACT---ATGCAATTTATTGCAAACACTCA ..::.::..................:..-::.x::..:..:.............:.x.x........xx..x............x.............::.:..:..................-.......----:x...:..............x..:...........-----.....:........x....x.:.............................:.....::..x:::.........:.::..::::...x:x...x.....--...xx.x.x::.x.....:.....:......:-.x..x...x.:.:x.x:......--..:................x..x.xx:...:.....:..---..:.:................:. 28M1D94M1D7M4D35M5D99M2D32M1D23M2I39M3D23M 301/380 79.2% 382/94230402 0.0% 19/380 5.0% 132920866 57293689 +79461 chr4 + 190214555 154234540 154234539 154237072 2533 ATTTGAACTTCATCTTCTGCTTTAAGTTCATGGCATGTACCACTGATGTGTGTTCCTAATAATTCTCCTTCTCTCAA----CAGTGGAGACAAGGCAGGAGGCTGCATCGTCAATAGGGAAAGAGATGGAGAAAAATTGGGAGTCATGCCTTCTGGCAGAGAACCAAGATGGTAGGGGATGGGAGAGCGTGGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTGGTGGGACTGCTTTAATCCCAGGCTGGGCTACTGCTGTTATCAAAGGGGGTGGAAAAACAAAAGATTTCTTCTCTTTTGGAATGCCA---GGCATATGCAAATGTTCATCCTTTAGTTTTGCAATATCATTAAATACTGAGGCAAGAGGTTGGAATTTGGGCTCCCAACTAAGAAGATAATTCCAGTGATAGTTGTCTTTTCCATCATGATCAGAGGTCGTCTGAGTTGAAAGAGCTGCACACCTTACTTCCTGATCACCTGAAATAAAGACAGACTCTTTTCTAACGTCAGCCAGGATGCTCTCTTTTGCCTCTCTCTTCTGAACTGTCTGGGGTAACACATTATTTTGAGCACAGGTGGTGCTGCAGCCTTCCCCTTGATCTCCTTCCCCAAATGTTTGGCTGGCTTCTGCTGTTTCGGCAGTCACCATCACATCAGTTTCCCCAGATAGGCAGGAGAGCTGGTCTGAGTCCCTCGGGATACCCGAGTCTGGCACCCTGGACTCGTGGTCACTCAGAGCTGAGTCTGAGCACTTTCTGTAGGGATGCTCATTTATCCTCTGGATTTCCTTATCTTCTGCAGTTTCTCCTTCCACAGAACAGTGGCCACTGGAGTTTGAGTGTCTGTACAGATTGACAATATC---CTTCTCCATGATACTTATTAAACTCAACCATTCCGGAGTGGCATCCACAGGGACCACCTCGTTACTGCAGTCGTCAGTTTTCTGGAAGGCTTTGAGCACACTGGCATCCCGGGTCACTCTCAAGTCCGCATCT---AAAGATGAGGTTT-TCTTCTCCTCATAATTGTTTATTGTGTCTTTTTGTTTATGTCTTAAAATCATTACAATTAGAATGC-----AGATGAGTATCAGAAACACTAAAAAGGAGACCACCAGGCTGATTGAAAAGCTGCTGGCGAACACTGCCAAGGGTGTTCCTTCAGAGGAGAAAGACACATTCACAAAAACAGTGCAAGATGCAAACTTGGAATCTGATTTGGGACTATGAGCGATTATTTTCATTTCCAAGGTGTCTTC------TTTGTTGAGTTGACTTTTTATTAGGGGAAGGGCTCTAATCAAATAAATATTTCCATTGGTTTTATTTACTGAAAAGAAAGGAGATGAGGTTCCAAGGGAGTAAAGAATGACTCCATCAATACCAGCATCTGCATCTGAGGCTTCCACTCTGCCAATCAACTGTCTGTCTTTATTCTTTTCTGGGAGGG-----TGAAAAAATACTGATCTTGAGTGAAAATGGGCTCAAATTCATCTATCCCTTCAATATCCACCCAGACCACTAAGGAGGCAGTTGCATCACCTTTGTCTTTGGCTTGGACTGTGAGGCAGTATTTATTGCCATTTTCATAGTCAAGGATTTGCTTAGCATGAATATCCCCTGTCAAAGGGTCAATGAGGAAGAGATCATGATCATAAGACATTCCATGAGTGAGAAAACAGGGTGATACAATAGAATAGGTCAATTCTCCATACGGACCAGCATCAAAATCCAGAGCATTTATAGAGCATATGGTAGAGGAAATAGGCAGATTTTCTGGAACAATACAGCTGAAGCTTGAGAACATAAACTGAGGTGCATGGTCGTTATCATCCAGGACACTGACAAACACAACTGCAAAAGAAAAATGTTT---------CTTTTCTGCATCTGAAGCTTGGACAGTTAAGGTGAATTTTGTCATTTTTTCATAATCCAGAGGTTTAATCAAATAAAGAACTCCAGTGTTTTCTTCTAAGTAAAAATGTCCCTTCTCATTTCCAGAGATGATGTTGTAGATGATTTCTGCATGTGACCCTGTGTCACGGTCATTTGCTGAGACCACAGTGATGTGACTCCCTAGAGGGGTGCTTTCCTTGACATGGGTGTGATAGCTCAGGCTGCTGAAGTTTGGGGGATTGTCATTGACATCAAGTACTTGTATTGATATGACAGCTGTGGAACTCAATGGAGGGCAGCCACTGTCAGATGCCAGAATGACAAGCTCATGGCTAGCACTTGCTTCTCTGTCCAGACTGTGAAGCAACACAAGATAACCGACTTGCTTATAAGGATATTCTGAATGAAAGAACTTAGTTTCCACATGAAAATTGTTCTGTGAATTACCACTGATGATGGAATATTCAACATATGTGTTTTCACGGGTCCAGTCATGGTCGATGTTTGAAAATGTAACAAGCGTGCTTCCAACCAGAGCATCCTCACTTAGGCTAAGATTATAGGATTTGACTGTGAATTCAGGGGCATAATTGTTCATATCTTCTATTCCTATCTCCACTAAAGTAAGAGCTCTCAGGTCAG chr4 + 94230402 21315255 21315254 21317774 21315255 21315254 21317774 2520 ACTTGAATTTCCTCCTCTGTTGCAAGTTCATGGCTTGGACAAATAAGATATATTCCTACCA----TTCTCCCATCAAAGGTTAATGCAGAAGCAGTAGGTGTCTGCATGGTAAGCAAAGATAGAGAAGGAGAAAAACT-----------------------ATCCAAGACTATGGATAAGGGAAGAACGAAGGCATTTTTTAAATGCTTGCCCAGATATTACATTTGGCATCCATGGTGGTACTGTCCTTATGCCAGGTTGAGCTACTGATGTTACCAAGGGAGGAGGGAAAACAAAAGG---CTTCTCCTTAGGAAGGCTACAAAACACATCCA--CTTTCATCTTTCAGTTTTGCAATGTCACTGAAGACTGAGGAGAGAGGCTGAAATCTGGTTTCCCAGCTGAGCAAGCAATCCCAGCTGTAACTGCCTCTGAGGTCCTCATCAGAGGTGCCAAGAGTTGCGAGCAAATCACACCCAGAGTCCTGCCTATCTGATACTAAGGAATAGTCTCTTGTGAGGTCTGTCAATATGTCCT-TCTTATTTCAGTTTTTTTAAGTGGCTGAGACAACACTTTGTTACTTGGATAGGCTGCATCACAGGCTTCTCC---ACCTTTGCATTGAACAGCCGGTATGCTCTCCACGCTTTGCGTGGTAGCCGCAATGTTGGTTTCCCCAGACAGGCAGGAAAGGTGGTCAGACTCCCTTGGGATCCCTGAATCTGGCACCCGGGAGTCTCGCTCACTCAGTGTGGAGCCAGGACTCTTCCTGCAAGGATGTTCATTGATCCTTTTGATTTCTTCATCCTCTGCAGTTTCTCCTTTGGCAGAATTGTGGCCACTGAAGCCTGAATGCCTGCAGGGCACATCATTGTCTTTCCTCTCTCTGATTCCTGACAAGCTCAGCCAATCTGCTATGACACCCGTGGGAAGCATACCACTCTCAGTATTTTGGATTTTCTGTCAGACCTTAAGAACCATATCTTCTCTGGCCAAATTCACATCAGTAGCTGAGAAGGATAATGTTTCTTTTTTTCACACAAGAGTTTATCACATCTTTCTGCTTATATCTCAGAATAAGTGCAATAACGCTGACAGCAAGGCAAGCAGCAGGAAAATAATGAGAGAGGCAGAAAGGCTAATGGACAGACTGTAGGTTGACAC---AAAAGGATAACTTTCAGGAGAATCGGAAACATTCATCAGAACAGTACATACTGCAAACTTTGGCTACATTTTTGGGCTCTGAGCCCTTACCAACAATTTCAAGGTGTCATCATTCCTTTTGCTG---TCATTTCTATTTTGGTGAACAGTTTGAGTCAAATAAATACCACCACTGTTTTGATTTACAGAAAAGAATGCAGAAGTTTTTAGCAGGGAGGAACAAACAACTCCATCCTGTTCACCATCATTATCTGATGCTGTCACCTTGCCAAGCAACTGGCCTGCTTCatttt-------aagaaatattttaagaaataCTGATCTTGTGAGAAAACTGGGTCAAACTCATCTCTGCCCTCAATATCTACCTGAACTGTAATTGTGGCCAGTAAGTCACCTTTGTCTTTTGCTTGGATTATGAGACAGTACCTATTCTGACTTTCATAGTCAAATGTTTGCTTTGTATGAATATCTCCTGTCAAAGAGTCAATGAAAAACATGTCATGATCTCCAGGAGCTTTACGCTGAGCCAAATATGAAGACTGGATGGAGTAGGTGAGATGTCCATAGGAGCCTTTATCAAAATCCAGGGCAGTGACAGTGCATACAA-AAAAAAGCTGGGCAGGTTTTCACTGACAATACAGTTCATGCTGGGAAACAAAAACAGTGGAGCATAGTCATTGTCATCTAGAACACTAAAGTGGACAACAGAAAAAGCCACACTTTTTAACATCAGCTCTTC--CATCTGTGCCTTGAATGAGCAAAGTAAATTTCGTGGTATCCTCATAATCCAGAGTTTTCATCAAATCCACAGATCCAGTTTTCCCATCCATCTGAAAATACTGCTTGTCATTTCCAGAAGTTATAGCATAAGTGATCTCTGCATTACTGCCTGCATCAGGGTCATTTGCTAAAACTTCTGTGACATGGCTACCGACAGGGAGGCCTTCTTTGACGTGAACGTGGTACTCTGAGCTGCTAAATTCTGGAGGATTATCGTTGACATCCAGTACAGTTATTAGCACGGTAGCAGTTGAGTTCAAGGAGGGCTTCCCATGATCAGAGGCAAGGAGGACGAGACGATAGGAAGCAGTAGTTTCCGTGTCAAGAAGACTGCTCAAAACAAGATTGCCAACAAGCTTGTAGGATGTTTCTGACTCCGTGACACTTGTTTCCACATTGAATAAGTTCTCAGCATTGCCATCAATAATAGAGTACTCATTGTATGCATTTTCACATGTCCAGTCATAGTCTGTTACTGAAAATGCAAGGATGCTTTCTCCTACTGAGGCACTCTCACTCACGCTGAGATTGTACAGTGCTCTTGTGAACTGAAGGGCATGGTTATTTATATCTTCTATGTGTACCTCTATAGAGGTGACTGTGCTCAGAGCAG .:.....:...x..:....:.x:...........x..x..x.x.:.x:.:.:......x:.----.:..:.:x....----:.:..x...x:x:.:...x.x......x..x.::.::..x.....x.........:.-----------------------.x......:x:.:.:x:.x..:...:..x:..::...:xx.::::.:.....x::xx....xx::.....:.x......x....:::.x..x.....:..:.......x.....:...:..:..x..:..........:---......:..x....x..:.---::..:..x..--:x......:..:...........:...:.:..x.......x:.....:..:...:...x:.....:..:..x.:::...:....:x:..::..:..:.xxx:..x.x.........xx:xx......x:..x:xxx......:x:xx.....x::.:....x.:x...:x.x.x...:..x.:.x...x.:..:x...::..-.:..:::..xx.:..:.x..x..x...:.::.....x..:..x:xx.x.:...:x.:::::...x....:..---.:..::x:x::x..xx.::x.xx..x::..::.xx...xx.::..x:..::x.::.::...........:........:..x.....x..x.....:.....x..:..:..........x...x..x:.x........x.:x...:.x.::.x...:...:.:.....:.....x.....:.x......:.:...:................:x:.....:x..........:..::...:..:...:.x:.xx::x..x.:..---.:....:x....x.:.:x:..:....:...x..:.xx:..:..:..:::..:.x..:x:.::.x:::xx:.:x.x::.......xx..:.:..:..x..xx.:x.x..:.x..:..xx:...x:..x.:.x..---..:...:.x....-.:..:.:.x..:..xx......::::.....:..:....:...:.:...x.x.:....x.x:x..x-----..:::..:.x...:..x.:x.x:.::...:.x:xx.....:..x..x.::...:x..:x:....---x..:..xxxx.:.....::..:xx:..x.......:x.:......:..x:x.........x.:x.x::x...x..:..x.....xx...::xx..x..:.........x..------....:..---.x.:..:.xx..x..x...x:.:.:x.:...........::x...:..x...x......x........x.x...x.xxx..xxx......x..x:..::........xxxx:..x....xx:......x...x:...::......x......x.:xx...:...:.-------:..::-----.x..:..............x.x.....:x..x.....:......x.x..:........:...:::..:::x.xx.x...x:x.:x:..............x.......:.:....:.....::....x:x.:............:x:.......x.:.........:..........:........::..x.x:........x:x..:x::.::.:.xxx::xx...:.x.:x..:xx:..:..:.....x.:x.x......x.::..xx:............:...x.x.:..x.....:::-.:.::.:x.:.....:.....xxx:.........:.x.x...x.::....x....x.x..x....:...:..:.....:..:.....:.x:x:x.....x.x.....xx.x.:x...---------..:...--......x:x....:.:::x:..:..:.....:..x:.x.::.............x...x.......xx.x.:x......x..::.x..:.xx.:.....:::x...x...........::.x..:x::..::....:.......xxxxx....::...x...........:.:..:x.x....::..:..x..x.x....:x..:...:.....:..:::...:..x:::::......:..x.:...:.....:..:........x.....xxx....:::.:.::...x..x..::....x.::..x:xx...:x:.....x..x..:.x...:..x:x..:.xx....x.x.:...:x....x...xx::x:xx...x.......x:..:..xx....:..:.:xxx......x.xx:x..xx:.x..........x:..xxx.....xx.x...:...:::..:..:..:..:...x::....::.......:x..........:...x:.xx:........:..x:.xxx.x::...x..::::...::......:.x...:.....:..x::.x:xx:......:.x.:......::..:..:...........x:x..:...:.:x:.:..:.xx.:x.....:x... 61M4D12M4I57M23D139M3D19M3I10M2D202M1D72M3D264M3I133M3I13M1I66M5I64M3D111M6I7M3D166M7D5M5I303M1D117M9I6M2D654M 1604/2481 64.7% 2520/94230402 0.0% 91/2481 3.7% 132919285 57295270 +5076 chr4 + 190214555 154244701 154244700 154244981 281 CTACTATTCATGAAGAACACAGGCT--GCCTTCTGCATTATCA-GAGTTGGAATATTAGTAGAACA-ACCACCTGAATCTCACATTTCTGGAGCCTAACT-----TCTGGAATAATTATATGCTGAAAGTTTATTTTGTT--AGTATGAATGTCAGTCAGATACATATGGAAATATTTTACCAAAAATAATCAACTCATACTCCTTT---------CTCCCCTGCTGCTTGCCCCTTCCAATGTCATCTAAA-GTCTCAGCCAAGACATCAAAGTTAAGTTTCTATCAACTCTTCTACTGTA chr4 + 94230402 21325066 21325065 21325340 21325066 21325065 21325340 275 CTTCCATTCCTGAACCATGCAAGCTCTGCCCTGGGTGTCTTCGTGATTTCCTATACCAAGAGAACACATAGCTTGAATTGCAGA---CTGGAATTCCATCAGTGATCATGTATAATTCCATATAGAAAGTGTATTTTTTTCTAGAATGAATATTGGAAAGGTACATATAGAAATATTTTACTAAAAATAATCACTTTCTAGGGTTTCAGGAAAAAACTC------------------------TCATAAAAATATTTCAGCCAAGGCAGTAAAATTAAAGTTCTGTCAACATTTTCATTACA ..x.:....x....xx.::..:...--...:.xx.::.:x..:-..x..xxx...::.:x......-.:x:.:.....:x..x.---.....::::x.::-----..xx.x......x:..::x......x......x..--..x......:.::.xx..:.......:............:...........x:.:x..xxx:..:---------...------------------------....xx...-:.:.........:..x:...:....:x....:.....x:..::.:.::. 25M2I16M1I22M1I17M3D13M5I35M2I65M9I3M24D9M1I49M 170/254 66.9% 275/94230402 0.0% 48/254 18.9% 132919635 57294920 +3156 chr4 + 190214555 154247508 154247507 154247571 64 AGTGG-GTGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAAAGTCGCTTGAACCTGGGAG chr4 + 94230402 76033200 76033199 76033264 76033200 76033199 76033264 65 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....-.::.x......:............:........x.xx.x:.:x.:........::.:.. 5M1I59M 48/64 75.0% 65/94230402 0.0% 1/64 1.6% 78214308 NA +3042 chr4 + 190214555 154247634 154247633 154247696 63 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTAGAATGGCACTAGACTTGT chr4 + 94230402 3859074 3859073 3859136 3859074 3859073 3859136 63 TTAAAACAAGAAGGAAGGGAAAAAAAAAAAAAAGAAAAAGGATGAGCATCACATTGCAGTTGT .:....x..:..::..:::..............:......:..x..x..x:..:.:x.x.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 150388560 39825995 +7972 chr4 + 190214555 154259528 154259527 154259762 235 AAATATATTTCTGT-TACCTGTATGACATGAGCATTGTAGAGTT-GGCTTTCAGACACTGATGCCTGGTAAATGCTTTGTTCAAAGCATGGTGAATTATCATTCTCATCCTGTATCAAGACTGCTACTTTGCAATAGGCTCTATGCCCACTACTTTCAGCTAAAACGATGAGTTGAACCTCATTTCTGACTTCAAAATCAAGAAACTTGGGTTCTTTCACAGTGAGTTGTCCTATTT chr4 + 94230402 21328628 21328627 21328862 21328628 21328627 21328862 235 AGATATGTTTCTTCATACCTGTATGACATCTGTTTAG--GAGTTAGGCCTTCCCATATTGATGCTTTGTAAGAGCTTTATTCAAATTTAGGTACATTGTCATTAACATCTTGTATCAATACTGTAACTCTGCATAGCGCTGAATTCAAATTATTTTCGGCCAAGACTGATAAATGTATTTTATGCTTAACTTCATAATCAAGAAACTTTGGCTCCTTTACTGTAATCATACCTGTTT .:....:.....x:-..............xx.:x.x.--.....-...:...xx.:.:......:.x....:x.....:......x:xx...:x...:.....xx....:........x....:x...:....xx:x...xx..x.xx.:..:....:..:..:..x:xx.:x..x.::.:..x::.:......x.............x..:..:..:..x..:.x:xxx...:... 14M1I22M2D5M1I192M 159/233 68.2% 235/94230402 0.0% 4/233 1.7% 132930900 57283655 +3048 chr4 + 190214555 154277604 154277603 154277693 90 ATTTTTTTCAAATGCAGAAATCACACCAAAAAAAAAAAAAAAAAGACAATAAGGAATATGGAGAAACAAAAAATGGCTGAATCAATGGAA chr4 + 94230402 77800813 77800812 77800902 77800813 77800812 77800902 90 ATTTTATCCAACTCTGGTCATTGCAGGTAAAAAAAAAAAAATTAGAAAACAAGGAGTTTGGAGGAAAAGGAGATTAATTAAGAAATGGAA .....x.:...x.x::.xx..::..xxx.............xx...x..:.....:.x.....:..x.::.:..x:x.x..xx....... 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 76476791 NA +24327 chr4 + 190214555 154297842 154297841 154298736 895 GACACTCACCTGCCTCACAATTTTCAGTCACGAGCCCTTTATACAGGTGGTGGCTGAAGGAAATCTTTACATCTTCTCCTTCCATGTGAATGACCAAGAGACCCGTGGTTGTCCTGGCTGGAATGCCCTGGTCTGTAACTTTTAACTGCAGCCAGATAGGGAAGTATTCTGAAGATGGATTTTGCTGAAATTGAATTTCTCCTGTGTATTTATCAATAGAAAACATTGACTGGGTCTCTGC------AAAACTAAAAACCACAGTTCCATTGGGCCCCAAGTCCAGGTCATCAGCTCTCACAATGACAGTTGTCTGGTTTGTAGGCGACTCGGGGGAAAGAAACACATCAAAAGGGTTCTGTTCCAAAACTGGATCATTGTCATTAACATCAGTGACATATACTTTTATAATTACAGTGGTGCTTCGTGAACCCTGGATGCTACAGTCTCTGGCCACAGCACTAAATGTATGCTGAGATCTGGCTTCACGGTCGAGGGTGTTGCTGGTTTTCAATGTGCCTGACATAGGATCAATGGTGAATGCACCAGAAGCCTCATCAGTCAGAAAATACTCAGTTTGCCCATTCAGGCCTTCATCCTTGTCCACAGCTGAAAGCACAAGAACCACTGTTCCCACTTCAGCATCTTCTCTCACAGAGGACTGGTAATAAAGTGTGGGAAAAGAAGGACTGTGGTCATTGGCATCCAAAACTCTAACTTGCAGGTGTATTACAGAGCTCCTAGGTGGATCTCCCAGGTCAGAGCACAGAATGACAAGGGTAAAATTGCTGATTTGCTCCCGGTCCAAAGCACGAGTGGTTGAGAGTTCTCCTGACATCTCATTTATAGTAAAGCACTCATCAGTATTTCCATCTATTAAAGAAAACAATTACAAATTCAT chr4 + 94230402 21336683 21336682 21337574 21336683 21336682 21337574 892 GAGACCCACCTGCTGCACTGTTCTCAGGCACACTTGCTTCATACAGGCTATGGCTGAACGAAATCTCCTCCTCTTGTTCCTTTGTAAAGATAATGACCAGAGTCATGGCTGTTCAAGGTGAGGTACCTTGATCTGAAGCCAACACTATAAGCTATGTACTGAAGTCTTCAGAAGCTAAGGGCTCCTGAAGAACAATGTCACCCATCTCTGAGTCAATCTCAAATA------AAGTTTCTGCTGCCAACAAACTAAAAACAATAGCTCCATTTGGCTCCAGATCCACATCCTCTGCTCTCACAGTGGCTACCATCTCATTCACTGTGGTTTCAACAGGCACAGAGGCCCTGATGGGGCTCTGCAGAAACACCGGATCATTGTCGTTAACATCATTGATGTGTTCCACAATGCTGGCAGTAGTGCTTCTTCGCAAATGGGAGCTACAGTCGCTTGCCACAGCCCTAAGCGTATACTGGGACTTGATCTCCCTGTCCAGCACCTTTGTAGTAACTATGGAGCCTGTTACAGTGTCAATGGCAAAAGCTCCAAAGGTGTCTCCAGTGAGCGAGTGCATAACTTCGCCATTTGGGCCATCGTCTCTGTCAGAAGCAAAGAGGCCCAGGATGGCTGTGCCTTCATCTAGGTCTTCTCTCACAGAGATGTGATACTGGTTCTTTTCAAACAGTGAGCTGTGGTCATTTTCATCCAAGACAGTTATGTGCAGCAGCGCAGTGGAACTCCTTGATGGA-CTACCTAGTCATGGCACTCAATTATAAGAGTAAAATTGCTGACATCCTCTCTGTCTAAGATACAAGTGACCAGCAGTTTTCCAGAAGTATTCTTTAGTGTGAAGCATTCTCCAATATTTCCACCTTTCAAACACAAAAA--ATAAAGTCAT ..x..:.......:x...x:..:....x...:xx:x...:.......:x:........x.......::x.x....x.:.:.:::.:x::..:.:x.xx...x:.:...:...:.x:.x..:::.:..:..:....x.:.:xx:.x:xxx...:.x:..xx.....x...x....x.:::xx:.x.....:xxx...x..x..::.x.x.xx:.....xxx...:.------::..:.....------x...........x.:..:......x...:...::....x:..x..x.........:..:.x::::...x:..:::x.xx.x:..::x:.:x.x.:.x:.x:::.x:...:....:xxx..x..:...........:.........x...::.:.x.:x:x..:x.x:....:.......x.x:xxxx...:x.........x..x........x....::....:...:..::..:::..x.x...x..x::x..xx.:..xx::.xx.x.....x:.:..x:.......::..x..x...:.:.:x..x:....x..x:.:.:.x:.::..xx.....::....x..:..::....x:x...x:.:..xx.x..:.:x:....x..:x.x..x:x:...............:xx..:..x.::xx:x.xxx...x::x.::...........xx.......:..xx.x.:x.....xx.:::x:::..:.....x.:....-..x..x:....x:....xx...x.:...:.............:x.x...:.x...:..:::..:....:::::x....:...x..x:.x.:x....xx..:.....:..x:..:........:..x.:...x.x..x..--.:...x.... 225M6D10M6I502M1D139M2D10M 543/886 61.3% 892/94230402 0.0% 15/886 1.7% 132961159 57253396 +8201 chr4 + 190214555 154304662 154304661 154305249 588 AACTTACCAATTATGTGATATTCAACAGCTCTGTTATTGCCAGCATCCATATCAGAGGCTAAAACCGTATAGACAACCTCTGGTTCCTGGTTTTCCAGAACCTCAATGTCATAACTGGAAACAATAAACTCTGGTGCGTGATCGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTGGTGCTGGACAATGAAGGGAATCCCCCATCTCGTACTAGTACT--------GACACAGAACACAAA------GACGGTAT-GAATT----------------GTGGCCTTTGATTCATACCTAAAATATG------------TTGTTCTAACTAGACAATGTCAGGCTAACCAGGTAGCACTGGCTCAATAATATTTTATTTAAAAACACCCCAACAAAATATAACATTTCACCACTTAACAGGTTTTTTTTAAATTTAATTTTTAATTTTTATTTTTTAGCCTACTCAAAGAATCCCTTACCTCGAAGGGTGAAGACTTCTTGAATTTCTCTGTCAAGTATGGTGGTTGTCACTACCTCTCCAGTGTCAGAATTTATCTCGAATAATTCAAATGAAGCACCTGGCATGATTTCAAACTGAAGCTTGGAATTGACTCCTTAAGAAAAATATAAAG chr4 + 94230402 21338711 21338710 21339293 21338711 21338710 21339293 583 AACTTACCACTTATTTTGTATCTTAGAGCTCCATTATTACCAGCATCCATGTCTGCTGCCCTGGCAACGTAAACTACTGAAAGTTGTAGATTCTCTGGAATACGAATGTCAAAGACAGGAAAGAAAAACTTGGGAGAGCTATCATTTTCATCCAGGACTTAGCAGATAACTGTCACTGTGCTTGATAGAGATGGAGTTCCACCATCTTGAACCAAAACTACGATTTAAAAACAGAAAGCAAATCTTATAGAGGTATAGAACTCCCTAGCAGTAGCAGAATAGTCATT-ATTTTTGCTACAAATAAGGCACATACTCCCTTGTT----CCTGAAAATATTAGCACTTCCATGTAACCCAGACTAACTCTGA-------TAGTAACACCACAACCA--------TTCTCACCTCCCA---------TTGCAAAAGCAGTCATAG----------------CTACTTCATG---CTGTTACCTTTAATACTGAAAACCTCCTGGGTTTCCCTGTCCAGTGATGCAGCTGTTAACAATTCTCTGCTGTCCAGATTTATCCTGAGTTTCTCATATCCAGGTCCTGGTAAGATATCATACCAAAGCAAGGAATGTCGTCCTCAAAAGGACAATAGAG .........x....x.x:...::x.x.....::.....:...........:..x.xx..:xx::.x:::..:..x..:xxx:...x:x.:..:..::...:x:x.......x.:x::.:..x:.x.....:x..x.x.:x...:........:xx:..xxx.....x:.:...:::x.....x..:.:x..x..::x...x......:.x..:.:x...--------:.x......x:....------::x.....-...:.----------------:.:.:.x..-...:x.:.:xx.....x.------------.....----.:x..x...:.:..xx:xx...x...:.x.x.:..x.x.xxx.-------..:x......x....x.--------x.:.....x.::.---------..x:...xx:.:.:x.x:----------------.....:x.x.---.:x......:x..x:x....:..:..:..::....:.....x...:xx.::.:...:.x:.x:....::x....x::.......::..:.xx:...x..xx..xx.....:.x...x...x..::....xx.....xxxx....:..:.::.xx...:.. 219M8I15M6I8M1I5M16I9M1D18M12I5M4D43M7D17M8D13M9D18M16D10M3D160M 332/540 61.5% 583/94230402 0.0% 91/540 16.9% 132965951 57248604 +9790 chr4 + 190214555 154315741 154315740 154316004 264 AAATTACCTGAATCTCTGTCCAGAGCTTCAACCCTGGTAACAAACTCCCCTGGATTTTGGTTTTCTTTCACTGAGGCTTCATACAGGTGCTGCTTAAATACTGGAGCTTCATCATTTACATCAAGAACAGTAACTGTCAAAGTCTGGGATGAAGAAAGTGCTGGTGTGCCATCATCCAGTGCCAGAACAGTCAGAATATGCTGAGTTTTCATTTCATAATCCAAAGGACAGGTTGTGGTTAGTAAGCCTGTTTTGAA-AATGGAA chr4 + 94230402 21343492 21343491 21343755 21343492 21343491 21343755 264 AAATTACCTGTGTCTCTAGCCACAGCTTCTACTCTTATGACCAGCTCCC-TGGATCCTGGTTTTCATAAACTGCAGTCTCATAAACCTGCTGCAGAAATACTGGGCTCTCATCATTCACATCAAGAACAAGGATGGTTAGAACCTGTGTTGCGGAGAGAGCTGGACTGCCATCATCAAGAGCCATGACTGTCAGACTGTAGTGCTCCTGAACCTTGTGGTCTAGGAGCTCGGCTGTACTTTGGAGTCCTGTTATAAAGAATGGAA ..........x:.....:x...x......x..:..x:.:..x.:.....-.....::........x.xx....x:.::.....x.xx......xx.........:x::........:............:x:.:x..:.:.::...x.x..x:..:..x.....xx..........x..x....x:..x......x.:.:x..xx::.xx.::.::.::..:.:::.x:x..:...:x..x.x.:x......x.:..-....... 49M1D207M1I7M 178/263 67.7% 264/94230402 0.0% 2/263 0.8% 132972249 57242306 +3491 chr4 + 190214555 154315747 154315746 154315927 181 CCTGAATCTCTGTCCAGAGCTTCAACCCTGGTAACAAACTCCCCTGGATTT--TGGTTT----TCTTTCACTGAGGCTTCATACAGGTGCTGCTTAAATACTGGAGCTTCATCATTTACATCAAGAACAGTAACTGTCAAAGTCTGGGATGAAGAAAGTGCTGGTGTGCCATCATCCAGTGCCAGAA chr4 + 94230402 54173832 54173831 54174012 54173832 54173831 54174012 181 CCTGAATCTTTGTCAGTAGCATGTACCTT------AAAGAACCGTGAATTCACTGGCTCAGACTCCAAAATTGTAATTTCATAGGAAAGCTGGTCAAACACAGGAGGGTTATCATTTACATCATGGACAGAGACAGTCAGGACGAAAGTAGAGGACAGCTGTGGCACACCCATATCTGAGGCCAGGA .........:....x:x...x.xx...:.------...xxx..x..:...:--...:.:----..:xxx.:..x:::......x:::x....x.:...:..x....xx.:.............x.:....x:..x....::::xx::.xx..:..x..:xx...::::..xx:...:::x.....:. 29M6D16M2I6M4I124M 106/175 60.6% 181/94230402 0.0% 12/175 6.9% 100141915 90072640 +31042 chr4 + 190214555 154320328 154320327 154321400 1073 TTACCACAATAAAATAAAATATTTTTAAAAGTGACATATAGGGCACTGTACCTGATGACTCATCTAGCATAAACGTCATGTTTTCATTTCCTGAGAGGATGCTGTATGTTACTTTTCCATTCCTTCCTTCGTCTGGATCGTGAGCAGTTATGTGGTGGACCAAGGAGCCCACTGTGACATCCTCTTTGACATGGGCATTGGGGAAAGAAATAAAAGTGGGGTTGTGGTCATTTACATCCAAAATCACTATTTGTGCTGTCAGTGATCTCAGTCGCCGGTCTGTCACATTCACAGCCTGATCAGATGCTGTTACTGTCAGGATGACAGTTGGAATGCTTTCTCTGTCAAGACGGGACACAGTGACTAGTGTGCCAAATGAGGGGTGGATGAGAAATGGATTCGTGCCAGGGTTGTGGGATTCAATGTAGTATTGTATTCTACTGTTCAAAAAACTGCCGTCATCATCTTTGGCATTGAAGACATACACCAGGGTTCCTATGGGAACATTCTCCTCTACACTGATCACAATGAGCTCATCCTGGAAAGATGGGGAATGGTCATTCTGATCTTCCACATCGATACTAAGGAAGACTGTGCTACTCAGGGAAAGGTTTTTGCTATGGTCTGTAGTAATCACTCTGAAAAGATAATGAGATGTCGTCTCATAATCAAGTTCCTTAGAAAGAAACAAGTCTCCGGTTGAGCTGTCTATTTCAAAGTGTCCATCCTTATCATCTGCAACAATACTAAAATGTAACTTTCCATTATAATGTTGTT-GAAGGTGATCAGATGACTTTATCAAGCTCATTATTTTTGTGGGCTTCAAATTTTCTGGTATAATTAAATGTCTAATATTCTGAGACATGATTGCTCTCCCTTTGGATAGTGGGATCACCTGAAATACGAATAAAAGAGATATTAAT-TTGGGGTATTTTTAAAACAGTTTAATGAATAAATGTAATAATA-TTATT----TTGAAAGCAAATTCCTTCCATGTATGTGATCATATGTTAATTAGTGAGAAAAATGTCATTTTTATAT-TATATAATTCCA--------GTATGTCTCAGAAGATCAAAAAC chr4 + 94230402 21344578 21344577 21345632 21344578 21344577 21345632 1055 TTACCGTGATAAA-CACAGTAT-------AATAACAAGAGAGTTACAGTACCTGTGATTTTATCCAATATGAATGATCCGTTTTCATTACCTGAAGTTAAGTGATACATAATATGTCCATTTCCTCCTTCATCAGGATCCTTTGCAGTTGCATAGTGCAGAAGGAGGCCCACACCTGCATCCTCCATGACATAGCAAAGAGGTGAAGATATAAAGCTGGGACTGTTGTCATTGACATCCAGAATAACAATTTTTGCAATCAGAGAATCACGTCTGCAATCAGCCACATTTATTGTCTGGTCTGTTGCAGACACCATAAGGATCATAGAATGAGTAATCTCCTTGTCCAGTGGGGATGCTGTTACCAAGGTACCATATAAAGGGTGAACAACAAATGGATTTTCAGCCATGCTACTCATTTCCAGGGAATATTGTATTTTGCTGTTTGGAGAACAGCCATCTCCATCTTTTGCATTAGATGTGTAAACCAGAGTGCCAGCAGGTACATTTTCCTCTATGCCAATCACTTTGAAGTCATCTTGAAAATATGGAGAATGATCATTCAGATCTTCTACATCAATACTGAGAAAGACAGTATTATTCTGTGGGGGGTTATTATTGTAATCCCTTATAATAACTTGCAAAAAGAAGTGTGAAGATGTTTCATAGTCAAGTTCCTTGTAAAGAAAAAGGTCTTCTGTCCAACTATCTACTTCAAAATAAACATCATCGTCATCTTCAGCAACACTAAAACACAGTTTCCTGTTA----GCTGTCAGATGGTTACCAAGCAATTTTACAGAAGTGAATACTCGTGCAGGTTTAAAATTTTCAGGTATGACAAAGTGCTTGAAATCTTGAGAGAAGACAGGTCTCCCTGTCGGAAGTGGGATTACCT---------ATAACAAAAACATGAAGACTGACATATTTTCCCAGTGCTATCAGGGGC-AGTGTAACGACAGTTATTTTCCTTGACAGTTTAATCATTCATCACTTGTGA--atatgttatt---------atatgttattattatatatatgttattatatgtACTAGGTATGCCTC-GAAGCCAGAAAAC .....:::.....-:.x.:...-------.:.:...x:x::.x:..x.......xx:x:.:...:.::..:..:.x:x:.........x.....::xx.x.:x:..::.x.:x.x......:.:......:..x.....x.xx......:::.:...x.xx.:.::......xx:x:.......:x......:.xx.xx:..x:....x.....:x....::...x......x.......:...x..x....x...x:....x..x::xx...xx.::..x.:......:.:x.:...:..x.x...x.x:..::.x.....x.:..xxx..:.:x.:..::....x..xx....::.x..x..:.:x..:...x..:.:.....:.::.x.........:x::x.x:x.:.::xx:x...x.x.x.:.........:.:.....:::.:...x...:..x:.......x.....::.x:::..x.....:..x..x:::..x.....:.......::.::.....xx...:x.....:..:...x....:.....:......x.......:.....:.....:..:.....x..::..:..x.x.:::....x..::.:.::..:x.x:....x...:xx....::x.:..x..x.x:..:.....:...........:x.......x.:....:.x..:x.:..:....:......:.:xx....x.::......x..:...:.......:::.::..:.::...----.:...:-..x...x.:..::::.:....:x:.:x.x.x..:.:x..::..:..x........x.....:.:x..:..::.:.x..::.....x.x..:x.x.......x.x.:x........:....---------....x.:.:.:..x..x-:..:x:......:xx.:::x.x.x.x.:::-.:.....::.:.-.....----....x..:xx.x..x...xx:::x.....--........x.---------.x....:...x......-...:.x...x:.--------.....:...-....x:x:..... 13M1D8M7D738M4D6M1I120M9D17M1I30M1D12M1I5M4I29M2D10M9D17M1I12M8I9M1D13M 672/1039 64.7% 1055/94230402 0.0% 50/1039 4.8% 132975750 57238805 +3435 chr4 + 190214555 154328065 154328064 154328148 84 TTAATCCCGTATGAACAGTAAGTTTT----ACCTGAAGATACTGAGTATGTAACTTCTGCATTATTTCCTTCATCAGGATCCTTTGCA chr4 + 94230402 21344628 21344627 21344715 21344628 21344627 21344715 88 TTTATCCAATATGAATGATCCGTTTTCATTACCTGAAGTTAAGTGATACATAATATGTCCATTTCCTCCTTCATCAGGATCCTTTGCA ..x....x:......:::.xx.....----........x..xxx::..::...:x.x.x....x::...................... 26M4I58M 61/84 72.6% 88/94230402 0.0% 4/84 4.8% 132983437 57231118 +9444 chr4 + 190214555 154334862 154334861 154335152 291 ACTTACTCAAGGGCTCTCTTGCTTTCACTGTTCCAATGGGACTATCTTCAGGCACATCTTCATAAACTAAGAAAGTGTACTTAGGCCTTTCAAACTCAGCAGGTGCCAGAGTTGTCTGGAAAATGTGTATGGTGACATCGGCATTAATGACAGCTGTGAGCCCACCACCGTCTTGAGCAGAGACCATCAACGAAAGTGTGGTAGATTCCAAATGACTAAGAGGTAATGTTAAGTAAATAATTCCTGGGTAGGGAAAAGAAAACATTGGTAAACAGATAACATGTAATAAAT chr4 + 94230402 21354499 21354498 21354779 21354499 21354498 21354779 281 ACTCACCTGGAGGCTCTCTAGCCTTTACAGCTCCAACTTGGCTGTCTTCAGGTGCATCTATGGGAACAGAAAAAGCATACCAGGATCTCTCAAAAGTGGCAGGGGCCAAAGTGGTCTGAAGGATGTTCACTGTGACAGCCGCATTGGTGGATGAGGAAAGACCACCCCCATCCCGTGCAGATACTACCAGGAGCAGCATAGAATGTGCCAGGTGACTGAAAGCTGAGATCAGGTAAAGAATTCCTG--------AAAGCATACAGAAATAAAGGAATA--ATGAAATAAAT ...:..:::::........x..:..:..x.:.....:xx.:..:........::.....x::x:...x:.:....::...:x:.::..:.....xx::.....x....:...x.....:.::....x:.:x......x.x.....::..:xx.xx.x:..x.....x..:..::.x.....x..:.:..:x::x..::.:.x.x:.x...::.....:.:..x.:.x:.:.:.....x........--------....x.x...xx::....x::...--...x....... 246M8D24M2D11M 180/281 64.1% 281/94230402 0.0% 10/281 3.6% 132980363 57234192 +3010 chr4 + 190214555 154341556 154341555 154341636 81 TACTGTATATGTATCGTAATGCATACATTCATATATATACACATACATTCATATATATATACACACACATATCTATCTATA chr4 + 94230402 62863502 62863501 62863582 62863502 62863501 62863582 81 TACAGAATATAAATTCTCACTAATATATCTATACATGTGTGTACACATTTATTTACATGTGCACACACTTTTTTGTCTATA ...x.x....:x..:x.x.:xx...:..::...:..:.::::.:.....:..x..:..:.:.......x.x.:.:...... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 91478054 NA +5279 chr4 + 190214555 154378429 154378428 154378573 145 GAGAGGAAAAGAGGAGGAGGGAAGGAAGGAAGGGAGGAAGGAAGGAAAGAAG-GAAGGAGGGAGGGAGGGT--------GGGAAGGAAGGAAGGAA---GGAAAGAAGGAAGGAAGGAA--GGAAGGAAGGAAGGAAGGAA---GGAAGGAAGGTAGGAAGG chr4 + 94230402 1500703 1500702 1500864 1500703 1500702 1500864 162 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaagg ..:::...:.:...x..:......:.:x..:....:.:.....::...x.:.-:......::.x:.:....--------.....x:..........---.....:..::...:...:..--....:x.::::.....::..---..::...:.:x....... 52M1I18M8I17M3I20M2I20M3I18M 102/145 70.3% 162/94230402 0.0% 17/145 11.7% 152877726 37336829 +3178 chr4 + 190214555 154390081 154390080 154390144 64 CTCTTTTTTTTTATTTTTTTAAATTTTTTTATTTTTTTTCTTTTATTATTATACTTTAAGTTTT chr4 + 94230402 91505194 91505193 91505257 91505194 91505193 91505257 64 CTTTTGTTTTTTAGAGTTTTGGGTTTTTTTGTTTTTTTTTTTTTGTTAGCACAATTTCAGTTCT ..:..x.......xxx....:::.......:........:....:...x:.:.x...x....:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 62884887 NA +3789 chr4 + 190214555 154428763 154428762 154428846 84 CATGGTGGCACGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::....::.::.--....:.:.........::.:........x.xx.x...x.............:..x.xx:..:..:... 14M2D68M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 78395566 NA +3002 chr4 + 190214555 154442530 154442529 154442567 38 CCCCCCCCCCCCCACACACACACACACACACACCAGGA chr4 + 94230402 64221456 64221455 64221493 64221456 64221455 64221493 38 CTCCCCCCCCCCCACACACACACACACACACTTCTGGA .:.............................x:.x... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 90221074 NA +3623 chr4 + 190214555 154447151 154447150 154447234 84 ACATGGTGGTGCACTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGGGGATGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.........x--....:.:...........::........x.xx.x...x::........::.:..x:xx...x..:.. 15M2D67M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% 78413955 NA +3407 chr4 + 190214555 154450693 154450692 154450762 70 CATAGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCACTTGAACGCGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....::..:.--....:.:...........::........x.xxxx...x.........x.:.... 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 78417496 NA +3013 chr4 + 190214555 154452625 154452624 154452680 56 AAAACAAACAAACAAACAAAAAAACAAAAAAAAACTGTTAAAGGTTGAGTTTTATT chr4 + 94230402 70955639 70955638 70955694 70955639 70955638 70955694 56 AAAAAGAACAAACAAACAAAACAACAAAAAAAAACTGTAGAGTATTTCTTTTTCTT ....x:...............x................x:.:x:..xxx....x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 83496986 NA +3191 chr4 + 190214555 154459324 154459323 154459401 78 ACTCCTGCCTTCAAAGCTCTCATTATAGAATTTCTTCAAAGGAATTTTACGTTTCATTAAAAAAAAAGAAACAAAAGA chr4 + 94230402 56958646 56958645 56958722 56958646 56958645 56958722 77 ACTCCTAC-TTCAAAAATCTTAACTGAAAATCCCTTTAAAGAAAAAATGTGTTTCATTATAAGAAAAGAAAAAAAAAA ......:.-......:x...:.x:xx.:...::...:....:..xxx.::.........x..:........x....:. 8M1D69M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 97500678 92713877 +3513 chr4 + 190214555 154463097 154463096 154463199 103 ACATATGTACATACTTATGTATATACATAAGTATATACATACTTATGTGTATA---------------------TATAT---AAGTGTGTGTATATATATATACACACACACACACACAGGAATTTG chr4 + 94230402 54005610 54005609 54005732 54005610 54005609 54005732 123 ACATGTGTGTAAAC----ATATAGACAACAACATTTAGTTACTTATGTGTGTAATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTG ....:...::.x..----:....x...xx.::..x..xx...........:..---------------------.....---.x:::.:.....x..........:..............:...:.. 14M4D35M21I5M3I45M 76/99 76.8% 123/94230402 0.0% 28/99 28.3% 100457487 89757068 +3109 chr4 + 190214555 154463136 154463135 154463187 52 TACTTATGTGTATATATATAAGTGTGTGTATATATATATACACACACACACA chr4 + 94230402 44815600 44815599 44815651 44815600 44815599 44815651 52 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA ..:x.:....:...:....:::...........x.:.x......:....... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 109647536 80567019 +3268 chr4 + 190214555 154463145 154463144 154463220 76 GTATATATATAAGTGTGTGTATATATATATACACACACACACACACAGGAATTTGGAGGGTTTTGTTTTTGTTCTA chr4 + 94230402 30834192 30834191 30834265 30834192 30834191 30834265 74 GTATACA-ATATGTAT-TATATATATATATATACACACACACACACAGGAGGTAATGCAGTTCTGTCTTCTTTTTA .....:.-...x..:.-.:............:..................:x.x:x:x:...:...:..:x..:.. 7M1D8M1D59M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 123628953 66585602 +3071 chr4 + 190214555 154488887 154488886 154488949 63 TGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATGTATTTATAT chr4 + 94230402 39131750 39131749 39131812 39131750 39131749 39131812 63 TGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATAT ...::.::x..........x.x.......:x.....::.....x.:x..:...x...::.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 115357137 74857418 +3021 chr4 + 190214555 154488897 154488896 154488950 54 TGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATGTATTTATATG chr4 + 94230402 85834541 85834540 85834594 85834541 85834540 85834594 54 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATG .......................:.xx:...:x.::..:.:.....xx..:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 68654356 NA +3397 chr4 + 190214555 154489651 154489650 154489765 115 CCTCGTCGGCATCGGAGGCGCTGACCCACATGACTACAGTGCCAGGGGCCGCGGCCTCGGACACTGAGGCCTTGTAATGCTGTTGGCTGAAGAGAGGTGGTTGGTCATTGAGGTC chr4 + 94230402 54176218 54176217 54176332 54176218 54176217 54176332 115 CTTCATCAGCATCAGCTGCTGCCACCTGCAGAACACTGGCCCCAACGGGTGCATCCTCGGGCACACGTGCCTGATAAAGAGTCTGACTGAAGACGGGTGGGTTGTCATTGATGTC .:..:..:.....:.xx..xx:x...::..x:..xx::.:x...:x..x:..:x......:...xx:x....x:...x.xxx:..:.......x:.....x.x........x... 115M 71/115 61.7% 115/94230402 0.0% 0/115 0.0% 100313433 89901122 +3305 chr4 + 190214555 154517703 154517702 154517773 71 CACCTGTAGTCCCAGCTACATGGGAGGCTGAGGTGGGAGAAACGCTTGAGCCTGGGTATTTGAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:........x..::........x:xx.x...:.:.....:..::.:x::..x:.....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 78484496 NA +3078 chr4 + 190214555 154533371 154533370 154533425 55 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACA chr4 + 94230402 1495001 1495000 1495055 1495001 1495000 1495055 55 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..x.:.........x.:......x........:.:..:...:.....x.:.::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 153038370 37176185 +3183 chr4 + 190214555 154533371 154533370 154533433 63 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACA chr4 + 94230402 78347568 78347567 78347630 78347568 78347567 78347630 63 AACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ..x..x....x...x..:.......:xx.:.:.xx..:.........:............x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 76185803 NA +3214 chr4 + 190214555 154533371 154533370 154533432 62 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACAC chr4 + 94230402 78347566 78347565 78347627 78347566 78347565 78347627 62 AAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACAC ....x..x....x...x..:.....x.:xx.:.:.xx..:...................... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 76185805 NA +3072 chr4 + 190214555 154533372 154533371 154533429 58 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACA chr4 + 94230402 51472490 51472489 51472547 51472490 51472489 51472547 58 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATA ...x.x.x...::......:x.......:.......x.:.:........x:.....:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 103060882 87153673 +3372 chr4 + 190214555 154533372 154533371 154533427 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x.:.::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 153038372 37176183 +3163 chr4 + 190214555 154533380 154533379 154533431 52 AAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACA chr4 + 94230402 74671056 74671055 74671107 74671056 74671055 74671107 52 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACA ..:..x.x.x.....x..xx.:................:............. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 79862324 NA +6549 chr4 + 190214555 154536454 154536453 154536758 305 TTGATATCTGCATC----TTCCTAGTATCACAAATTGTTTTAGAAATAAAAACACAGGGGTAGGGGACAGGGGACAGTTTATTGTAAAATA---TGAAGCAGCAATGATTGAAGCAAGTGAATTTCTCCTTTATATTCCCAGCCAGAGCACAAAATGACTGGATATCCTCATGAACGCCAAGCTTTTTTTTTTTTAATTAAAAAGAAAAAAAAAGAGAGAGAAAAAATTCCACATTCATTAAAATCTCTTTCTCTTGATAATTTCTGGTTTCCAGCTGACTGGATGAGTTTCTTCTGTCTAAAAATAGAAAA chr4 + 94230402 21376084 21376083 21376354 21376084 21376083 21376354 271 TTGACAGCTGCAACCTGTTTGCTGGGATCACACAAC----CAAAAAAAAAGACAAAAAGAAAGAAA------TAAAATTTATTAGAAAACACACTGAAAAAGCAAAGACTTGC-----TGACTTTCTGCTCTTCTGTTGTAGGCAGACCATAATGTGACCGAAAGCTCTCAAAAAAGCCAG-------------------------AAAATAATTACAGCACAAGTATGTTGC-TGCATTAAAATCGCTTCCTCTTGATAATTTCTGGTTTCCAGCTGATAGGATGAGTTTCTTCAGTCTAAAAGGGAAGAA ....:.x.....x.----..x..:.x......x.x:----:.:...x...:...x.::.:x..:::------x.x.:......:x....:.---....:x.....x..:.x:x-----...x.....x..:.x:xx.:x:..x....x..:..x:....:.:.x:::....x:..x....:-------------------------....x..xx.x..x:x..:x..x:::.-.x..........x...:............................:x..............x........:x::.:.. 14M4I18M4D26M6D19M3I19M5D63M25D27M1D78M 181/264 68.6% 271/94230402 0.0% 48/264 18.2% 133160370 57054185 +3199 chr4 + 190214555 154536627 154536626 154536673 47 AGCTTTTTTTTTTTTAATTAAAAAGAAAAAAAAAGAGA-GAGAAAAAA chr4 + 94230402 64795974 64795973 64796021 64795974 64795973 64796021 48 AGCTTTTTTTTTTTTAATTAAGAAGAAAAAAGAAAAAATGAGAAACAA .....................:.........:..:.:.-......x.. 38M1I9M 42/47 89.4% 48/94230402 0.0% 1/47 2.1% 89740653 NA +15302 chr4 + 190214555 154537283 154537282 154537490 208 TACGGCTGTGTCATCCTCTCTGTATACTTTAATGGTTTTATCAGCTTCAGCTGTTAGTAATCGACTTTCAGACTGATCAAAAGCACAAGCAAATATTCCTGATTCACTGTCCAAAGACCCAGGTTGCACAGCTGCGTGAACTCTCTGAAAATTGTAGCCAGTTCTCCAGTCCCAAAGATGCATGGTGCCATTGTCAGCTTAAAGGGAA chr4 + 94230402 21377309 21377308 21377516 21377309 21377308 21377516 208 TACCGCAGTATCATCTTCTTTATATACTTTTATGGTTTTATCAGCTTCAGCAGTTAGCAATCTGCTTTCAGACTGGTCAAAAACACAAGCAAATATTCCTGATTCACTGTCCAAAGAGCCTGGTTGTACAGCTGCATGTACTCTCTGGAAATTGTATCCAGTTCTCCAGTCCCAAAGATGCATAGTACCATTATCAGCTAAAAATAAA ...x..x..:.....:...:.:........x....................x.....:....x:...........:......:..................................x..x.....:........:..x........:........x..........................:..:.....:......x...:x:.. 208M 181/208 87.0% 208/94230402 0.0% 0/208 0.0% 133159974 57054581 +11015 chr4 + 190214555 154537964 154537963 154538184 221 TTTACCTCCAGATACAAGCACTCCATCAGAATTTACCGTCAATGTGTTAATAATAGCATTATGACCGGAAAGATTTTGAATGAAACTTCCATCAGGGAATTTCCACTGCTTTATGTTATCTGGAGAACCAGATGCAAATGTGTAACTGAAATAATATTAAAAAGAATTAACGACAAAGTAAACC-AAGTTAAATAAAGTGGTGGGTTTTAAAAAGTTTATTT chr4 + 94230402 21380058 21380057 21380261 21380058 21380057 21380261 204 TTTACCTCCTGAGACCAAAACTCCATCTGAATTTACAGTCAGTGTGTTGATAATAGCATTGTGACCAGACAGGTTCTGAATGAAGTTTCCATCTGGGAATTTCCACTGTTTAATGTTATCTGGAGAACCAGACGCAAACGTATAACTGAAA-------GAAAATAAT------CACAGTATATTGAAGATACATAAGGGGGTA-----TAAAAGATTTCTTT .........x..x..x.:x........x........x....:......:...........:.....:..x..:..:........::.......x..............:..x....................:.....:..:.........-------:....x...------..x....x.::-...x..x....:.x...:-----.....::...x... 151M7D9M6D11M1I18M5D14M 167/203 82.3% 204/94230402 0.0% 19/203 9.4% 133157906 57056649 +22764 chr4 + 190214555 154539037 154539036 154540953 1917 CACTAGCATTTCAGCATTATCTTAAGAACTGAAGAAAAACAAGAAGCTAATTAGGAAAATACACTTACTGTCTTGGATGTAAAACCACAGCCCTAACTGATTTTTTGTGATTTGTTAATGTCACTCTTGTTTTTCCAGCCACCAGATCCCATAATCGAATTGTAGTATCATGGCTTCCTGTAATGGAA-----------ACACA------TATATCCCTCAAAACATAGACCAGGAAAAATAATGCAAAAGTTAA---ATAAAATACAAAGCATTCTTCCAAAACACATATGTTCTAAA---------TGAAAGTCATATCACACGCAAATTAGTCTTGGCTAATTTCTTCATAGTTCCAAATTTTTAGGTTGATTTTAATTCTTTAAAAAA-ATGCAATACAACA-------ATTGATTCACTGTCAATTGAACAGCT---------------------AAAACAAATGCAAATAACAAATAAATATATAATTGTATACCCTAGTGAAAAG-------GAAAAAACTTCAATGATTTTTTTAAG-----TTAATAAA-ATACATCAGGCAAAGGAATTA---------TTTTCTAGTATTAAAGA---TCCATTGTTACTAACTTTATTTAGAGCAAAGTAAGATTCAAATCAGTTCTAAAGATTACTAGTCTCAAGATGTTTTGTCTTCTAACTTCAATTTCTTAGAAAAATAATTTTGACACTATAAAATAATAATTGTTCATAACACAG---TATTCTAGTCAGACATTACAGGATACTATGTATGGCATACTCTATGATATGTAAAAAGCATGAGGTAAAAACAGTGGAATGAAATTTCATTTGAATACATTT-CAATTGTCCATGATTAAAATATGACACAGAAACACTGTAAACACAATACAGAGCAAGAGTCATCATGAATATTAAAAGTATATGTATAATAACATGGATTCTGACATGAATATTCTGTAAACTTGAAAAGTATCGATCATACCTGTAATAATTTGTGGTTCTGCAGCCTGACATCTCACTGTAGCAACTGCATTTGTATGTCCAGATAATGTGTGTACACTGGCTTTAGTTCTCACATCCCAAATCTATAAAAACACAATAGACATATTAGGAAAGAGAATAGGTATTCATTATCTCAAGAAGATAAC----TGGATCAATTCAAGGCTGAAAATTTACTACATAACTAGTGCCTGAATATAATAAAGAAAATGCTTAAGTG---AAAGATAATGATTTACAAACTGG--------AGGACGAATATAAATAGGAGACAACTTGCAAGAATTCTAAAAAGC------TAAAAGATCAGGGTAC---TGAAAATCTAAG--AATGAGTATGATGGGACTACTTTTTAAGA------CTACTGAATGAAAGAACTAATGGACAATAGTTGTTACAGAATGGAACGTGAGAATATCACATTTCAGGGGCAGGGCACTAATAACACTAACATGGTGAGGCCATACAACTGAAGACTAAG----GTGGAAAAAAATGCAAGTTAAGAAACTTAGGGACTAGGATATTGATGACTCAAGACAGCTATCTTTAATTCTCTATCAATCAATTGAAGACACTGAAACCGAAAGTGCACCCTACAAGATGCAATATATTTACAGATAAATACACAACTCTATCCCATTTACCCGTGCAGTTGAATCTCGACTACAGGTTACCAACACATCGATTGTCGGGTGCAAATCCAAACCATACACTGCACTTAAATGTCCATGATAATGCCGTATAACCTAAAGACAAAGCAGGAAAGTTAAAACTTCTAG---AATTAGAAAGATAAATAGTAGTTCACAATGTTTTA-----------------AATCCTTAACTCCAA--------------ACTTACCTTATTGTATTCGAGATCCCAGCATTTCACTTGTTTGTCTTCTCCACAAGAGAACAGATATGGGCTCCTTGTGCTTACTATCACGCCCCGCACAGTACTAATATGCCCAGTCAATGACAGTTTTAATTTGCCACTAGCCAAGTCCCAGATCTGCAATCAAAGAA-TATTT chr4 + 94230402 21380870 21380869 21382665 21380870 21380869 21382665 1796 CATAGGCTTTCCAGCACCACACCACGAATTATGAGGGTAAAAGAA-----TGAGGAAAA----CTTACTGTCTTGGATGTAGTATTACTGCTCTTACAGATTTCTTATGGTTTGTTAAAGTAACACGAGTTTTTCCCGCCACTAAATCCCAAAGCCGTATGGTAGTATCATGACTGCCTGCAATGAAATTTAAAAAAAAACACTACTTATTCTATCCTTATGATTGTTTTC----ATAAAACACACAAAACTTCATATGTGAAAAACATAAGGTTATT----GATATCTCTGTTAGGAAACTATGGCTTTAATTCCATTTCAGAAGAGAAACATACTGGGTT------------GTAATAATTTTTTATGCAGCTTGAAATTCAAAGAGAAGTATGTAGTTCAGCAGGGCATTATT--TTCACAGTCAGATAACCTACTGCCCTTTTCTCCCCTCCAGAGAAAATTGGGGCAGA--------------------GCAGGCCCTGGATGCCAGCTCATCCAAACACAGTCC--TGATTTTTTTGAAATGCCCTAGTGGACAGAGCTCAGGGCAAGGAATTTACCTTCCATCCTTCCAGTATCTGAGAAATCCCCTACTTATGGATCCCTGCTGCTGCA------GCTCCAATTTTGACATAATGGA---------AAAGATGCACTTTTTATTAACT---ATGGCATGGGAAA-------------TGCAGAAAGACATTCAAACAATACACAGCTATATTT--------CCTTATGTCATGCTGTTAATGGTATAATTAACCAT-TGCATAACCCATTTTCAAAAGAAAGCT-AATGAGAAATGAATTTAATAAGTTAACAAAGAGAAAAGGCTTGAACCTCACAGAAATACATGACAAATACA-------GCTAAGGTTGGGTTTATTACTTATGATATTTGCAAAATCATGTGGACTCT--------------------------------------ACCTGTAACAACTTGTGGTTCTGCAGCTTGGCACTTCACTGTTGCTACAGCATTTGTGTGTCCTGAGAGCGTGTGCACACTGGCTTTTGTCCTCACATCCCAAATCTATGAAATTACAGTAAAAAAA---AAAAAGCAAATAGGC-----------CAAGAAGGGTGCATATTTTATGATTTTTAGACACTGTAATTGATACGT---TAATTCCTTACTATA----------TGTTTAGGTATTTAAATTGTTTTGTCCACCAAGCAGTTCATCACAAGATGAACTGCACCAGTGGGTAAATTTCAAGAGGAGCAGGGAGCCTACCTTTAAATCTCGAGATACGCACAGAAATCACAGGGAGTAATTCTG-------TATATTTAGGGAGTTTATCTAGTAAATTAAGGAATAATTTG--------------------------GAGTACA----ATTTTTGGGG---------------------------------TACAATTGAAGGCTTAGTTTTGTAATCTACAAAGGAAGACAAAGATAACATGAACTGTCATGTTTTCATTTTAATATG--TATTCTTAACTCCC-----ATTAACT------------------AGTCCCTTCTACAA-ATGGAAGATATT--------AAAACACAAAGTTAT---ACTTACTCGAGCTGTTGAATCTCTGCTACATGTTACCAGGACATCTATTGTTGGGTGCAAGTCTAAACCATAGACAGCACTTAAATGACCATGGTAGTGTCTGATAACCTAAATG---AATAAAAAAAATACATGTTTTAACCAAATCACTTA---AAAGAATATTTCAGATGCTTTTATTTTTATATTTGCCACTACCCATTAATTCCAATTTAAGAAACTACAGATTACCTTATTGTATTCAAGATCCCAGCATTTCACTTGTTTGTCTTCTCCACAGGAAAAGAGGTATGGACTTCTTGCACTTACTATCACACCTCGTACAGTACTAATGTGTCCCGTCAAAGATAATTTCAACTTGCCACTAGCAAGGTCCCAAATCTGCACCAAAATAAGTATTT ..:x:..x..:.....::.:x::.x...:.:x:::::x.x.....-----.x.......----..................:x.::..x..:..x..x.....:..:..:........x..x..x.xx........x.....:.:......x.::..x..x...........:..x....:....:..-----------....x------.x.....:.xx:.x::.xxx.----.x...xx.::.....x..x.---:.:...x...x.:x:..x..----:.:.:x.x....xx:..---------.x..xx:...x...x.x.x:..x:.xx..x..:.------------..xx:..x......x.:x.x..xx.....xxx:.:..:-...:.:.x..:..-------...--.....x....:x.:.x.x:..---------------------....:x::x...:.--------------------.:.x:....:.xx:xx..-------:..x.x.x.:.--..........:.:-----:..:.::.-.x.xx.....xx........x---------::...:.....:x:...---:..x.xx...:x:.::::xx:.:xx...------.x.:...x.:x.x:x...x.:x---------x......:x:.x.:.x:.....---..xx.x.:.:...-------------.::.:..x:.:.x.::xx..xx......---....:--------.x...::xx..:..:.xx....:...x.:x.:x..-..:.x..xx...xxxxx...:.x..:x-.....:.xx.x.x..x....x:..x-...xx:xxx.x.::.x:..:x.x...x.:.x...:x::...:...-------..x.::..::xxx.x.x..:.x.x::...x..:.x...x.::....:...--------------------------------------........:..:...............:..:..::.......x..x..x........:.....x..x.::.....:...........x..:..................:...x:...:..:.x.x.---::....x:......:-----------.......:xx:.----.xx..x.x..:x..:.xxx:x.x..:x...:.---..:.x...x.x....----------..:...:..:---...xxxxx.x:.::..x..x::.--------.:..:...:xxx.x:..x:.::..x..x.....:xxx:.:::...------.x...xx..::.:...---:::.....xx..--.:.:.x.x..-------..:x...x::..------...x.:...x..:...:x.x.x.--------------------------...x.:.----....:x....---------------------------------.....:.....:..x..----..::xxx.x..x.x...x:..::.xxx:.x.:...:xx..:..xx::x:.:..x.::--...::....:..:.-----..:..:.------------------...x.x::......-...x..x.....--------..x......xx:...---.:....:..x..x..........x:.....x.......:x.....x.....:........:..:........x..x...........x.....:..:..:.xx..........x:---.::.::...:x..x.xx..:..:---...:.xxx.---...x.:..x....x.xxx.....-----------------.x:.x....:.....--------------:x................:...................................:..:..x..:.....:..:....::...........:..:..:...........:..:..x.....x..:.:...:..:...........x.:......:.......x:x...x..-..... 45M5D9M4D125M11I5M6I21M4D20M3I20M4D17M9I34M12D38M1I13M7I3M2D21M21I14M20D18M7I11M2D13M5I8M1I21M9I17M3I28M6D22M9D22M3D13M13D28M3I5M8D35M1D27M1D25M1I45M7D50M38D127M3D15M11D12M4I32M3D15M10D10M3I23M8I45M6I16M3I12M2I10M7D12M6I23M26D7M4D10M33D17M4I57M2D14M5D7M18D14M1D12M8D15M3D115M3D23M3I9M3D23M17I15M14I170M1I5M 1084/1638 66.2% 1796/94230402 0.0% 437/1638 26.7% 133158167 57056388 +7491 chr4 + 190214555 154542171 154542170 154542293 123 CTTCCTTCA--TTATTACCTTTATAGTTCTGTCAGCAGATCCAGTAACAAACCACTGATTTCCAGGTTCCACAGCAATACATCGAACCCAGCCAAGATGCCCACTGATAACCTGTATAAAACAAA chr4 + 94230402 21382992 21382991 21383116 21382992 21382991 21383116 125 CTTCATTCAATCTCTTACCTTAATGGTTCTGTCAGCTGAGCCAGTAACAAACCACTGATTTCCTGGTTCTACCGCAATACATCTCACCCAGCCCAAGTGACCACTGATAACCTTTGGAAAAAAAA ....x....--:.x.......x..:...........x..x.......................x.....:..x..........xx........x.::..x.............x.:x....x... 9M2I114M 103/123 83.7% 125/94230402 0.0% 2/123 1.6% 133159179 57055376 +5901 chr4 + 190214555 154544439 154544438 154544562 124 ACTCACCCTGTAGAGTTTCCACGGTGGGTGCCACTGGGGTTTTGGCATTGTAGGGGCTTTTTTAGCCATCAGTGCAGAGTTCTTGGTATTGCCAGTCTCCATGACAATCTAGACATAGAAGAGA chr4 + 94230402 21383697 21383696 21383820 21383697 21383696 21383820 124 ACTTACTCTGTATAGTTTCCAAGGTGGATGCCACTGAGGCTTGGGCATGGTTGGAGCCTTCTTTGGTACTAATGCAGAATTTTTGTTTCCGCCAGGTTCCATCATAGCCTGTAAATTAAAAAGA ...:..:.....x........x.....:........:..:..x.....x..x..:..:..:..x.x:.::.:......:..:...x.x::.....x:.....x.:.::..:x.x..x:..:... 124M 87/124 70.2% 124/94230402 0.0% 0/124 0.0% 133160742 57053813 +5064 chr4 + 190214555 154546120 154546119 154546233 114 TACTTGGTCTGCAAAG---GTAATGCCACCGCTAAGGACTGTGCAGCTGATTCACTTGGCATTCTCTGGATCTTAGTATCTGCTGTCAAAGCAACCCCTATTAAAATGAAAAATCAA chr4 + 94230402 21384434 21384433 21384549 21384434 21384433 21384549 116 TACCTGGACTGAGAAGCAGGAAGTGATACAGCTAAGGACTGAGTTGCAGATTCACTAGGTATCCTTTGGATTTTAGTGTCTGCTGTCAGAGCCACACCT-TAAAAACAACACACCAA ...:...x...x:...---.x.:..x:..x...........x.:x..x........x..:..:..:.....:.....:..........:...x..x...-.x....::.x.x.:... 16M3I80M1D17M 85/113 75.2% 116/94230402 0.0% 4/113 3.5% 133161686 57052869 +3857 chr4 + 190214555 154546969 154546968 154547083 115 TGACATTTTTAAGACATTTTCAATATATAACAGCTCACTAACCAGGTCCTGGTGGGTATGGATGTGTACCTGCCACAAAGTATTCAACTTCTTGTCCTAAAAAAACACAAAAAAA chr4 + 94230402 21385285 21385284 21385392 21385285 21385284 21385392 108 TGACATATCTGA------TTCAA-ACACAGAATTTTATTTACCAGGACCAGGTGGGTATGGATGTGTGCCAGTTATCACATACTCCAGTTCTTCTCCTAAAGATCAACAAAATAA ......x.:.:.------.....-.:.:.:x.x:.:.:.x......x..x.................:..x.::.:x.x:..:..x.x.....x.......:.xxx......x.. 12M6D5M1D91M 77/108 71.3% 108/94230402 0.0% 7/108 6.5% 133161684 57052871 +9147 chr4 + 190214555 154548800 154548799 154549046 247 AGCAAT---TGAAAAAAAAAAACTACACCA--------ACCTCTCTTCATCTAAAGGCACAGGTTTTCCATTATCAGCTACAAACATGTCATGGGTCCTCTTCAACGACCTGAACACAAGGGTGTGTACAGAATGTTTCTGTACCTCCTAAAAAAAAAGAATGTAATTACACACCTATCTACAAATTACACAAATCATAACCTAAAGTC--------AGATTGATTATACACTTCACGTGTTTAAATATGTAAAAAGCTTTATACC chr4 + 94230402 21386621 21386620 21386881 21386621 21386620 21386881 261 AGCAATCACTAACAAAATAAAACTCAGCCACAGTACTCACCTTTCATCATCTAATGGTACAGGTTTGGCATTATCAGCTACAAACATATCATGAGTTCTCTTCAAAGATCTGAACACAAGTGTGTGCACAGAGTGTTTTTGGACTTCCTAAAATAAAGGAAAGCATATTTAAATGAATTTAGCCA-TACTTAAATGAAAAACTGAAATCTGAAAGATAAATTGAGTAGCCATTTCAGACTT----ATATATAACACTATTTACATC ......---.:.x....x......xx:...--------....:..x........x..:........xx...................:.....:..:........x..:...........x.....:.....:.....:..x..:........x...:...x.:.xx.x:.x.:xx..:..xxx.-...x:....x.x..x..:..:..--------.:.....x..xx..:....x::x.----....:...x.xxx....:.:. 6M3I21M8I147M1D23M8I24M4D21M 180/242 74.4% 261/94230402 0.0% 24/242 9.9% 133162179 57052376 +4717 chr4 + 190214555 154556696 154556695 154557076 381 CTTTCCAAAAATGTCCTTGGTATGTATGTATGTGTGTTTGTGTGTTTGTGTGAGAGTGTGTATGTCTGTATGAATGTATGTATGTATTATATATAATCTTCATAGAAGGATGCAAAGATATACATACACAGGTGTTCATTTTGCTAAGGTAGGAACACCACATCAATACAAGAGAAAAAATAGC-TTTGTACATAA-CAGGAAGAAACTGTCCATCATAGTAGGTAAGGGTAT-------AGAGTCAGAA------TGCCATGATTCAACTCCTTCTCTGCAAGTTACCTGCAGCATCATCTTGGGTAACTTTCTT---CTTTTTGTACTTCAATTCTCCCATCTGTAAAATGGGAATAATAGTACTACTCTACCTCATAGAGTTATTGTAAGAATTAA chr4 + 94230402 83500877 83500876 83501242 83500877 83500876 83501242 366 CTCTTGAACTATGTCCATGatatatatatatatatat--gtatataCACCTTAAAATGCTTATAT--------ATGTGTGTATCTCCTTTACCTAAGTCTGAT-------TACATGCATATACAGAAACAGAGTTCTTTCTTTGCACACCAGGCACAC---GTGCACACATGAGTACATGCAGTGTTTGTACACACTCCAGTTAAGTTTGT------TAGTGAGGAAGGGTGATTAGCTAAGAAACAGAAGATGGGTGTCACA---CACCCACATACCTGGAT----TCTGTACCCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAA ..:.:x..xx......x..:...:...:...:.:.:.--..:.:.x:::x.x.:.:..:x...:.--------....:.....x.x:.x..:x...x::.x..-------.:..x:x.......x.x....:xx.::x.:..xx:.x:x:...x....---:.xx.:...x...x.x.x::..:-........:.x-.x:.xx:.:x:...------....::.x......:x-------...:x.....------..:..::---..x.:x.x.x:...x.x----:...:.x.xxx.:::....:..x..x...---..x.x...:.:...:..:.....:...........::x.:......x.xx:........:..:.x......:..:x.x.. 37M2D26M8D30M7D48M3D23M1I11M1I14M6D16M7I10M6I7M3D17M4D29M3I80M 218/348 62.6% 366/94230402 0.0% 51/348 14.7% 71055819 NA +3300 chr4 + 190214555 154558447 154558446 154558516 70 TACAAAAAAATACATATATACATACATATATACATATATATATATATATATATAGAGAGAGAGAGAGAGA chr4 + 94230402 76376875 76376874 76376944 76376875 76376874 76376944 70 TATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAA ..::x..........:...:......x.xx...x.:.:....:....:.::...x.:.x...x.....:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 78181572 NA +32538 chr4 + 190214555 154567584 154567583 154570713 3130 TTTTTCCAGATAATGAAAATGTAGTCAATGAGTACTCCTCAGAACTGGAAAAGCACCAATTATATATAGATGAGACTGTGAATAGCAATATCCCAACTAACCTTCGTGTGCTTCGTTCAATCCTGGAAAACCTGAGAAGCAAAATACAAAAGTTAGAATCTGATGTCTCAGCTCAAATGGAATATTGTCGCACCCCATGCACTGTCAGTTGCAATATTCCTGTGGTGTCTGGCAAAGGTA---ACTGATTCATAA--ACA------------TATTTTTA---------GAGAGTTCCAGAAGAACTCACACACCAAAAATAA---------GAGAACAACAACAACAACAAAAATGCTAAGTGGATTTTCCCAACAGATCATAATGACATTACAGTACATCATAAAAATATCCTTA-----GCCAGTTGTGTTTTGGACTGGCCT-------GGTGCATTTGCTGGTTTTGATGAGCAGGATGGGGCACAGGTAGTCC--------CAGGGGTGGCTGATGTGTGCATCTGCGTACTGGCTTGAACAGATGGCAGAACCACAGATAGATGTAGAAGTTTCTCCATTTTGTGTGTTCTGGGAGCTCATGGATATTCCAGGACACAAAAGGTGGAGAA---GAGCTTTGTTCATCCTCTTAGCAGATAAACGTCCTCAAAAC--TGGGTTGGACTTACTAAAGTAAAATGAAAATCTAATATTTGTTATATTATTTTCAAAGGTCTATAATAACACACTCCTTAGTAACTTATGTAATGTTATTTTAAAGAATTGGTGACTAAATACAAAGTAATTATGTCATAAACCCCTGA---ACATAATGT-TGTCTTACATTTGCAGAATGTGAGGAAATTATCAGGAAAGGAGGTGAAACATCTGAAATGTATCTCATTCAACCTGACAGTTCTGTCAAACCGTATAGAGTATACTGTGACATGAATACAGAAAATGGAGGTAAGCTTTCGACA-----GTTGTTGACCTGTTGATCTGTAATTATTTGGATACCGTAAAATGCCAGGAAACAAGGCCAGGTGTGGTGGCTCATACCTGTAATTCCAGCACCTTGGG-AGGCCAAAGTGGGCTGATAGCTTGAGCCTAGGAGTTTGAAACT--AGCCTGGGCAACATAATGAGACCCTAACTCTACAAAAAAAAAAAAAATACCAAAAAAAAAAAAAAATCAGCTGTGTTGGTAGTATGTGCCTGTAGTCCCAGCTATCCAGGAGGCTGAGATGGGAGATCACCTGAGCCCACAACCTGGAGTCTTGATCATGCTACTGAA-----CTGTAGCCTGGGCAACAGAGGATAGTGAGATCCTGTCTCAAAAAAAAAAATTAATTAAAAAGCCAGGAAACAAGACTTAGCTCTAACATCTAACATA---GCTGACAAAGAGTAATTTGATGTGGAATTCAACCTGATATTTAAAAAGTTATAAAATATCTATAATTCACAATTTGGGGTAAGATAAAGCACTTGCAGTTTCCAAAGATTTTACAAGTTTACCTCTCATATTTATTTCCTTATTGTGTCTATTTTAGAGCACCAAATATATACTAAATGGAATGGACAGGGGATTCAGATATTATTTTCAAAGTGACATTATTTGCTGTTGGTTAATATATGCTCTTTTTGTTTCTGTCAACCAAAGGATGGACAGTGATTCAGAACCGTCAAGACGGTAGTGTTGACTTTGGCAGGAAATGGGATCCATATAAACAGGGATTTGGAAATGTTGCAACCAACACAGATGGGAAGAATTACTGTGGCCTACCAGGTAACGAACAG-GCATGCAAAATAAAATCATTCTATTTGAAATGGGATTTTTTTTAATTAAAAAACATTCATTGT-----TGGAAGCCTGTTTTAGGCAGTTAAGAGGAGTTTCCTGACAAAAATGTGGAAGCTAAAGATAAGGGAAGAAAGGCAGTTTTTAGTTTCCCAAAATTTTATTTTTGGTGAGATTTT----ATTTTGTTTTTCTTTTAGGTGAATATTGGCTTGGAAATGATAAAATTAGCCAGCTTACCAGGATGGGACCCACAGAACTTTTGATAGAAATGGAGGACTGGAAAGGAGACAAAGTAAAGGCTCACTATGGAGGATTCACTGTACAGAATGAAGCCAACAAATACCAGATCTCAGTGAACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGGAGCATCTCAGCTGATGGGAGAAAACAGGACCATGACCATTCACAACGGCATGTTCTTCAGCACGTATGACAGAGACAATGACGGCTGGTATGTG-TGGC--------------------------ACTCTTTGCTCCTGCTTTAAAAA----TCAC-----------ACTAA-----TATCATTACTCAGAATCATTAACAATATTTTTAATAGCTACCACTTCCTGGGCACTTACTGTCAGCCACTGTCCTAAGCTC---TTTAT---------------------GCATCAC-------TCGAAAGCATTTCAACTATA---------------------------------AGGTAGACATTCTTATTCTCATTTTACAGATGAGATTTAGAGAGATTACGTGATTTGTCCAATGTCACACAAC-TACCCAGAGATAAAACTAGAATTTGAGCACAGTTACTTTCTGAATAATGAGCATTTAGATAAATACCTATATCTCTAT-----------ATTCTAAAGTGTGT-----GTGAAAACTTTCATTTTCAT----TTCCAGGGTTCTCTGATACTAAG-----GGTTGTAAAAGCTATTATTCCAGTATAAAGTAACAAACACAGT----------CCCT--AGATGGATTGGCCACAA---------AGGCCCAGTTATCTCTCTTTCT------------------TGCTAT---------------------AGGGCACAGGAGGTCT---TTGGTGTATT-------------------------------AGTGTGACTCTATGTATAG-------CACCCAAAGGAAAGACTACTGTGCACACGAGTGTAG----CAGTCTTTTATGGGTAATCTGCAAAA----------------CGTAACTTGACCACCGTAGTTCTGTTTCTAATA-----ACGCCAAACACATTTTCTT---------------------------------------TCAGGTTAACATCAGATCCCAGAAAACAGTGTTCTAAAGAAGACGGTGGTGGATGGTGGTATAATAGATGTCATGCAGCCAATCCAAACGGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAGATGATGGTGTAGTATGGATGAATTGGAAGGGGTCATGGTACTCAATGAGGAAGATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTA---GATTTTTGCTCTTCTGTATGTGACAACATTTTTGTACATTATGTTATTGG chr4 + 94230402 21394680 21394679 21397744 21394680 21394679 21397744 3065 TTTTTCCAGACAATGATATTATACTTTCTGAGTATAACACAGAAATGGAATTGCATTATAACTACATAAAGGATAACCTGGACAATAACATCCCCTCTAGCCTCAGGGTCCTTCGTGCAGTCATAGATTCTTTACACAAAAAGATACAGAAACTGGAGAATGCAATTGCAACCCAGACAGACTACTGCCGTTCCCCATGTGTTGCTTCCTGTAATATCCCGGTGGTTTCAGGCAGAGGTACTCATTTAACTATAATGACAGCTCTTTCTTCTTATCTTTATATCACCATGCAAGTTGATGTATGCAGCATTCAGTAGGTGTGACTGTTCTCTGAAACCCATAACAATGATTAAGGT-----------------AGCAGAAAAGATGGATA--ATTATCCAATATGAAAAAACCCTCTTACCTGACATCTGGTCTTCAGGTTCCCCTTCAGTAAGATGAAGGTGATACTTTTG----------TGACTCATAG--AGTCTTTCTTTTTCAGTTATGAAAGATTCCTCTTT-----TACAAGCTTGTCTAATACAAAAAGTCATTGAAATATATACAGTCTTCAGTTGCTTGGGTTT------AACTTTTAGAAATACCTATCTGGAAATGTAGAACAATACAAGTATTCTGTCTTTTCTTCCTTGAT-----TCTTTCAAATGGTATATTACAGATACTAAAATCAAAGCAGAATTAAATACCT----------CTTTAAAAGTGT-----------TTCCTT--------------------------------GTAATCAG---CAAATCAAGTTGTTCAGAGCCCTTTTAGTAACAGAGTCTCTGGTTTATTCTTGCAGAATGTGAGGATATTTACAGAAAGGGAGGTGAAACATCTGAAATGTACATCATCCAGCCAGATCCTTTTACCACGCCATACAGAGTATACTGTGACATGGAAACAGATAATGGAGGTTAGTGTGAAATAACAACGTCATTAAAATATTAATATG----------AATACTAAAACAT-------AACAAA----------------TATACTAATAATTTT--CAATTTATACAAACTAATATGGAGTTAAAATTTTTG--TAGTTATTTGAGAATTAAGTCTGA----------------CTCATTC-----------------------------AAAAGAGTCA----TGTTTGT------------------CAGATACCCAGCAGGAT----------ATCGCT-----------------GTAATGAAATTGTAAATGAATAAGTCTGTAG-------------GGATGGGTAAAT---------AAAAACATATCTTACTA--------------------TAGCTAAAATCGTTAATGTATTGGTGGACAGA-AGCAG--------AGAATCTGGCTCTTTTCTTACCCTGTTACTACATG-CTATACAAAAAAACCTGAGGT--------GCTTCTTCACCTTCT---GCTTCTACA-------------------TTTCCTCATGGAGC-------AAGACACTGATTA-ATAATTAATTAA-------------------------TTCAAAG--------------GTTAATTAATCTATG-TCCTGTTGTTCCTGT-------AGGCTGGACTTTGATTCAGAATCGCCAGGATGGCAGTGTTAATTTTGGAAGAGCATGGGATGAATATAAAAGAGGATTTGGAAATATTGCAA---AGAGTGGAGGGAAGAAATACTGTGATACACCAGGTAAAATACTGAGCATGAAATGTGA-------------GCAGTG--------CTTAGTGAAACAATTTCCCCTGTACTTCTTGAAGCTC--TTTGACTTTTTAAGATTAACTT--TGACAGACTTGCAG--GCAAATCATAA-------------------AGCTGCCTTGAAGTATATTCTGAAATTGATTTCCTCAATTACTGTTACTTCTCAGGTGAATATTGGCTTGGAAATGACAAAATCAGCCAACTTACCAAGATAGGACCCACAAAGGTTTTAATTGAAATGGAAGATTGGAATGGTGATAAAGTATCTGCTCTTTATGGAGGTTTCACCATACATAATGAAGGAAACAAATATCAGCTTTCTGTTAGTAACTACAAAGGCAATGCAGGCAATGCTCTGATGGAAGGAGCTTCACAGCTGTATGGAGAAAACAGGACAATGACAATTCACAATGGCATGTACTTCAGTACTTATGACAGAGACAATGATGGATGGTATGTACTTGCATTAGACATTTAAAAGAAATTACCAGACTGTATGTATCTGCTTAAAAAAAAGCCCACAGACTATTTCAACTAACTTGCTGTTAGTTTGCACAGCACTTTATAGTATCTTAAAATG-----------TGTTTTCTTACTGTAAGTTACTAGCC-AAGCCCCAATTCATCCTGTTCTGGTGCAGCTTAGGGCATAATGGGCATAGCCAAAGAGTTAAAACTATACTGTTAGTGCTGCTCTATTACAAAATAAGGAACAGGAATACTGAATTTTACTGATTCCAGGAATGATGTTCAGACTGA-----TGCTTTGTC---TATAACACAATATACTCATTATCAGAGCTTGA---TGGAGGTAGTG--CTTAGGACTATTG---TTTTGGTTAAGTAGGAATATTGGTACTCACTCCAGTAATACAGAGATGAGTCCTAAGGGGAGGCACAAATTATGATAAAAGTCCTGCCTACTCAGAAGACAGGAGCTCAGTTGTAGAAGACATATTTTAGATCTAAAGTGCTAAATTAAGTGTTAGGTCTATCTTAAAAATAGATTTGTTCAGATTTGAGAATACATACAATTGTCATTATTTCTAGTACCTTTAAATTATGATGATATTGCAATTATCATTATGAACTGAGGGAACTGTTGTTATCAACTGGTAAACTATAACGTCATTCCCAAAGAGACGCAACTAGAATTTTAACTATATCTATAAGCAGCTTCATTTGCAGGCAC-ACAGCATAACACATGCTTGCAATAGTCAATCTTTTACAGAAAGTTTAGATAAGATTTTAAGTATTTGTTGTAGTTTGAAAGTTTCAGTACGGGGACACATATACACACTCCAGACCTATTTTCTTACAGTTCATCTGTGACTCTTATCTCCTGTTTTTACTTTATCAGGTTAACTACAGATCCAAGAAAACAGTGTTCCAAAGAAGATGGTGGTGGATGGTGGTACAATCGCTGCCATGCAGCCAACCCTAATGGCAGATACTACTGGGGAGGGACTTACAGCTGGGATATGGCAAAACATGGTACAGATGATGGTATTGTATGGATGAACTGGAAGGGGTCATGGTATTCAATGAAGAAGATGAGCATGAAAATCAAGCCATACTTCCCAGAT---TAATCATCAACATGTATAGAATCAGGGATCTTCTTT--------TCATATTTGTACCTTTTGTTTTTAG ..........:.....x.x.:..x.:xx......:xx.x.....x.....xx...::.xxxx..:...:.x..x.x:x..:.:.::..:.....xx...:...:x.x..x......x..:..x.:..xxx::.:x:x.:x..:.....:..::.:..:xx..xx:.:x..:.:..:.::..x..:..:..:x.......:::..::xx:..:.....:..x.....x..x....:.....---.:.x.x::....--...------------...:....---------.x:....xxx.x.x:xxx..:x..x:.::x:.:.---------..:.x.x.:.....::.:x..::.-----------------.:....xx.x.xx..:.--.:x:.x..x:..:....x.:...:x-----.x..x:..xx:..::.::.xx...-------.:..x.xx..x.:x.....----------..:xx..:..--....:--------...xx:..:xx...x:x.x:x.-----...x:.....xx:.:xxx:x.:.::..:x..x.x..:..x.:x:...xx:xx:...x..x.------.:..:x.:..x..x..x:xx::x...x.xx.:.x..---:..:x..x.x:x.::....xx:x...-----..:.:x...:--.:x:..:x.xx.......:.x...xx.:...:x....::.----------:..:...:..x.-----------:.....--------------------------------..:.::.:---....x:..x.xxx...x.:x..::.x.---...x.:.x.-..x:...:x:................x...xx...:..:.......................:x....:..:..x..:xx..:.::..x:..:..:..................:.x.....x.........x..:x.xx:.:.-----..::..:.xx.:..:..x..----------:....::x..x..-------.....:----------------:....:x:.....::--..x:..:x:-.::.:..x:...:x.x.x.::..xx.--...xx:.....:.x.--..:...:----------------..x.:..-----------------------------....:.:...----....x..------------------...x..:....x...x.----------...:.:-----------------..xx...xxx..:x.x....-----......-------------....:.xx.:..---------.....x.x.x:.x.:..--------------------.....xx..:xx:...::..---.:x....:.-..:.:--------:....::::.::xx.x:...xxxx....:x.x..:-.....xxxx.x..::..:...--------..x::.x..x:...:---.x..:....-------------------......:..x.x.:-------.:::...::.x..-...x.x...x:.-------------------------.......--------------...::.....x....-..:.x.....:....-------...x.....xx..........:..:..:..:..:......:.:.....x..::x.......xx.......x::............:......---.x.xx.:x........x.......::x:.........x:x..x.-.....x..x:.:.-------------.x.:..--------:...:.x...x..:x.:.x:...-----.x.....::--...::x:xx......xx.::..--.....:.xx..::.--..x..xx....-------------------..:.x..:x:..x.x....:.x::xxx.....:----...x:xx..x::.:.:........................:.....:.....:.......:...:.........:.:x....:..x........:..:.....x..x..:......xxx....x:........x.....::....x.......xx........:...x.:..x..x.::..x....:...x.xx..x..:.....:..x.....x.....x..x......xxx..............x.....x........:.......x......:..x.................:..x........:-.x..--------------------------...x.x..:x:......x.....----:...-----------.....-----.:.:.x.x:x..x.::xx..x.:.:...:..x..xx.-----------..xx:x........x..::...:x..-....:.---..:..---------------------....x.:-------x.x....x:..xx.......---------------------------------...x.x..xxxx..x.x..x...::.x::....x:..:...xx..-----..x......---.:.x......:-...:..xx:x:.:.:..x..---..::x::...x--:..xx..x..x..---x...:.x...:..xxx....:xx..:-----------..x.x:.::..x..-----.x.:.::.x:xx...x.x..----x...x.xx.x...x..x:x:.:.-----:......:...x:..xx..:x::.x......:x:...:xx...----------:.:.--.:..:....x.::xx:.---------.x::x..:..:..x:.x.....------------------..x...---------------------....x..x.xx.x.x.---:....:x.:.-------------------------------.x.x.:...x...x....:-------..::::x...x.x-..x:.xxx:....:.xx..:.:----..:.......::.:x.:.:.:x.x..----------------:...::....xx:::x:...x.x.xxx.xx...-----..x...:..x:........---------------------------------------..........xx.......x..............:........:.................:...x.x..:...........:..x..:.................x..:xxx....x......:........:.....:............:.x...........:.................:.......:.........:.....:....:...x.x.......x.x---..:..x:...:.:...---:..:xxx.x......x.--------x...x.......x..x....x..:. 240M3I12M2I3M12I8M9I34M9I24M17D17M2D25M5I24M7I19M10D10M2D5M8I22M5D61M6D36M3I26M5D10M2I40M10D12M11D6M32D8M3D27M3I9M1I144M5I20M10D13M7D6M16D15M2D9M1I26M2D15M2I7M16D7M29D10M4D7M18D17M10D6M17D20M5I6M13D12M9D17M20D20M3I9M1D5M8D35M1D21M8D15M3D9M19D14M7D13M1D12M25D7M14D15M1D15M7D92M3D44M1I13M13D6M8D23M5I9M2D22M2D14M2D11M19D33M4I311M1I4M26I23M4I4M11I5M5I37M11D26M1D6M3I5M21I7M7I20M33I45M5D9M3D11M1I20M3D11M2D13M3D26M11I14M5I20M4I23M5I43M10I4M2I17M9I22M18I6M21I16M3I10M31I19M7I13M1D22M4I26M16I33M5I19M39I230M3D16M3I17M8D25M 1774/2670 66.4% 3065/94230402 0.0% 855/2670 32.0% 133172904 57041651 +3679 chr4 + 190214555 154574711 154574710 154574771 61 GTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........:.::........x.xx.x...x...........:.:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 78541507 NA +43005 chr4 + 190214555 154584124 154584123 154584868 745 CTATTGGGTCACAAGGGGCCTAATTTTCATGCGAACAGCCCTGAGGGAATAATCTGCCCCTCTAAAGGAAACCCAGACCACTCCATTCTCAATCTCATAAGGACTGTTATTCCTTGGGTCATAGGAGCCCCCAGGGTAGTAGATTCCATTGAGATTGGCTGCTTGGCAGTTATTATACCACCAGCCTCCCCCATAGACTTCTGCACAGTTCTCTTCCCACTGGTCTGCATCCCTGTCAAAGGTGCTGAACTGCATGTTGTTGTGAGAGGTGTACTCTGCCCCTTCCTCTACGGAACCCTCAATCAGAGCATCACCCGCAGTGCCTTCATAGGAGGAGACTTGGAGGGCATAGCCTTCAGCCTCAGAGCCTACCCGGAAGTGATATTCTGCATAAGCTTCATTCCCAGCCCAGTCCTCTAATTCAACCCTAAGAACAGAGCCCCTTTGGGTTAGTAAGTGGAGGTAGTCATTGCCTAGCCAGAATTCTCCTTCCCCCTCGTCATTCAGGCTGCCGAAACCTCTCTTGTAGTCTTGCCAGGTCCGGTTAAAATTCAGTGATCCATCCATTCTTTGCTGGATCAAAAGCCATCCTCCCAAACTGGTCTCTTGATCGCAATAAACAGAAAAAATCTTACTGGATCCCGGTAGCTTGATATTGAAAATGCCACTTTGGGTACCTGAAGGATGTGTTTGGAGGACATCATCACAGTCTAAAAAAAAAA-TTAAGCTGGTTGGA-AGAAGTTAT chr4 + 94230402 21404687 21404686 21405433 21404687 21404686 21405433 747 CTACAGGGTTTCCAGGGGTCTGATTTTCATTCTAACAACTTTGAGGGAATAATCGGAGGCTCTAAATGGTATCCAGACTACTCCATTCTCGATCTCATATGGAACATTGTACCTGGGGTCATAATGGCCCCCTGGATAGTAAATGCCATTGAGGTTGGCTGCCTGGCAGCTGTTGTACCACCAGCCACCCCCGTACACCTCTGCACAGCTCTCCTCCCAGTGGTCCTGGTCCCGGTCAAAAGTGCTGAACTGCATCTGGGCATGGGATGTGTACTCAGAGCCCTCCTCCAGCCAGCCAGCAACCAGAGCATCCCCAGCAGTCCCCTCATAGGAGGACACAGTCAGGGCATAGCCTTCTGCTTCAGTCCCTACCTGCACGATGTACTCTGCATATGCAGCATTTCCATCCCAGTCCTCTAACTCTACTCGAAGCAGAGTATCGTTCTGAGTCAGCAAGTGGATATTCTCATTGCCCAGCCACAACTCTCCTTGCCCTTTGCCATCCACGCTGCCGAAACCTCTCCTGTAGTCTTGCCACGTACGGTTAAAATTCACTGATCCATCCATTCTCTGTTGGATCAATAGCCATCCTCCCAAAGTGGTCTCTTGGTCGCAATAAACTGACAAAACCTTATTGGATCCCTCTGGCTTGATTTTGAAAATGCCACTTTTGGCACCAGAAGTGTGTTTCTGGCGGATATCATCGCAGTCTAAAAAAAAAAGTTGATCTGGTTTGACAGAAGTTAT ...:x....:x.x.....:..:........x.x....:.::.............x.xxx.......x.:x.:......:...........:........x...x::..:.x...x........:x:......x..:.....:..x........:........:......:.:..:...........x.....:..x..:.........:....:.....x.....:xx:....x......:..............x.x.x::..:..x........x.xx..:.....:.xxx.:..xx...:.........x..x.....x..:...........x..xxxx..............x..:....xx......:.x.x.xx:..:........x..xx....:...x.............:..x..:.x...x.x..x::.x:.:..:..:..:.......x:.xx........:.....x..:.......x...:.:.:...:..x................:.............x..x.............x...............:..:........x...............x..........:...........x..x....:....:........xx.:.......x................x..:...x....x:...x.:...x...:......:................-..:.x......x..-......... 722M1I14M1I9M 589/745 79.1% 747/94230402 0.0% 2/745 0.3% 133179437 57035118 +5858 chr4 + 190214555 154586638 154586637 154586941 304 GGTCTCTCTAACTCCATTCTCATCTGCGGCATGTCTGTTAATGCCTTCCACTCTGGGGGTACCTTCTGAAGCTGGCTCTTAAAATTTCCGGGAAC---CAAGTCTGGAACTGGTTTCATTTTTATCAGTGGTAAGTGTTGCCTATCTCTAGAGG----GAAGTAAGTCTTTGGCAATGACCTGTTCAAGTTGCTTCTGCTGATCTTCATAGTCCTTCAGATCTACTTCACGAGCTAAAGCCCTACTGCATGACCCTCGACAAGATCGGATCTTAATATCAATGTCCACCTAGAGAGAGGGGAGAAAAATAA chr4 + 94230402 21406490 21406489 21406795 21406490 21406489 21406795 306 GGTCTTTCTAATACCACTTGCATCTGTTTGATGTTATTAAATGCACTCATAGCTTGCATTTCTGGTGAAGGCTTGAGCTTAAAATGTTCAGGAACATTCGAGTCCTTAAGAGGCCTCATTTTCAGT-GTGCTCAAGGTGGT---TGTTTGAAAGTCTGGGTGCATATCAATGGAGCTGGCCTGGGTAAGATGCTTCTGGATGTTGTCATAGCCTTCTTTGTCCACCTGGTAATCAAAACTTCTAGCACAGCTCCCTTTGCAAGCTCGTATCTTAATATCAATGTCCACCTACATA-AACAGAGAGAAATAA .....:.....:x...:.:x......:xxx....:xx.x.....x:..xxxx..x.x:x.x.:xx:x:.:...x.xx........x.:.:.....---.:....:xx..xx..::.......:.x:-...x.x.:x..x.:---.x.:.::.:.----.:x.:.x:..xx...x:x..:....xx:...x........xxx:.:x......:.:.::xx:..:..:.x:::.x.x...x::...x::..xxx....:x:....x...x.......................x.x.-.:x:....:...... 95M3I28M1D14M3D10M4I137M1D15M 183/299 61.2% 306/94230402 0.0% 12/299 4.0% 133180148 57034407 +3098 chr4 + 190214555 154587718 154587717 154587803 86 AAAAAAGAAAGGAAGAAAGGAAGGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 10269808 10269807 10269893 10269808 10269807 10269893 86 AAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG ...:.....::...x....:..x:..:.:xx......::x.x:.....x:..:......:x:xx:.:....:....x:..x...:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 144317910 45896645 +3311 chr4 + 190214555 154587738 154587737 154587825 88 AAGGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAGAAACT chr4 + 94230402 41112178 41112177 41112263 41112178 41112177 41112263 86 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAA--GAACACAGAGAATAAAGGAGGATAAATATT .:.:..........x..x...x...x....x.:..:..xx.x.:.x..........--:..x.x......x....:.:..x.:.x.:. 56M2D30M 62/86 72.1% 86/94230402 0.0% 2/86 2.3% 113475560 76738995 +3078 chr4 + 190214555 154600294 154600293 154600403 110 AACAACTTCTGTCTCTGCACGCATACACGCACACACACACACACACACACATGCACAAACACAAAGAGATAAATGAAACGTAGTCTTTCCCACACTCTTGGTCTCTTTCA chr4 + 94230402 43671838 43671837 43671934 43671838 43671837 43671934 97 AAAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCAC-------------TAAAGAAAGCAAAGTTTTTTAAATGGTAATTGTGTCTCTCA ..x.....:.x...x.x:.::...::.::....::..........x..........-------------....x:..:.:x...:...:xx.::x.xx.x..x...:... 56M13D41M 65/97 67.0% 97/94230402 0.0% 13/97 13.4% 110928456 79286099 +8348 chr4 + 190214555 154604888 154604887 154605080 193 TGGTCTGACCTGTTTGGCTCCCCCCAGGTGGTGTTGCTGTCCTTCTCCAATTGTGAGTCTGTTGAATGGGATTATCTTCATAGTGGTTTTCTTCATGGAATACCACCGGGTTTTCCAAGTGGCCCAAATAATGCCATTATCATAACCATTAGGAGTAGATGCTTTTGAGTAAGTGCCACCTAAAACAAGTCGT chr4 + 94230402 21416818 21416817 21417004 21416818 21416817 21417004 187 TGGTCAAACCTGCTTGAGGCCTCCTGAGTG---CTGCTGTCCATCT---ATTGAGAGTCTGTTGAATGGGATGATTTTCATTGTAGTTTTCTTCATGGAGTACCATCGGTCACGCCATGTTGCCCATATAATGCCATTGTCATATGAATTTGTACCAGTATCTCTAGAGTACACACCACCTAAAAATAGCAGT .....x:.....:...:xx..:..:::...---:........x...---....x..................x..:.....x..:..............:.....:...x:x:x...x..x.....x...........:.....xxx...x.x.x:..xxx..:.x.....x:::..........xx..:x.. 30M3D13M3D144M 139/187 74.3% 187/94230402 0.0% 6/187 3.2% 133188070 57026485 +5279 chr4 + 190214555 154605973 154605972 154606077 105 GTGTTGCTGTCCTTCTCCAACGGAGAGTCTGTTGAGTGGGATTATCTTCATAGTGGTTTTATTCATGGAATACCACTGG---------GATTTCCAAATAATGCCATTATTGTA chr4 + 94230402 21416845 21416844 21416955 21416845 21416844 21416955 111 GTGCTGCTGTCCATCT---ATTGAGAGTCTGTTGAATGGGATGATTTTCATTGTAGTTTTCTTCATGGAGTACCATCGGTCACGCCATGTTGCCCATATAATGCCATTGTCATA ...:........x...---.:x.............:......x..:.....x..:.....x........:.....::..---------.x.x:...x...........:.::.. 16M3D60M9I26M 82/102 80.4% 111/94230402 0.0% 12/102 11.8% 133189128 57025427 +18461 chr4 + 190214555 154606691 154606690 154606996 306 AAAGGAAAACATACCTTGGTAATAAACTCCATTGAGATGGCCAGCGTGACACTTGTTCATCCACCAACCAGATCCATCCTGTTCAGCACAGTTGCCTTCAAACTTATCATTGTCATTGTCCCAGGTACTGAACTGCATGCCATTATGGGATGTGAAAAACTTGTCACTAGGATCATCGCCAAAATCAAAGCCATCAAAGGCATCTCCAGCATCCCCACCAGCGAAGTAGGCATATGTTAGGCGGTACTTGTCAGCTTCAGGTCCCACCTTGAACATGGCATAGTCTGCAGTACTGAGAAGAAGGAA chr4 + 94230402 21417338 21417337 21417643 21417338 21417337 21417643 306 AGAAGATATTTTACCTATATAATATTGTCCATTGAGGTGACCAGCATGGCATCTATTCATCCACCATCCAGATCCATCTTGCTCAGCACAGTTGCCCTCAAAGTTGTCATTGTCATTATCAAAGGTGCTGAAGCGCATGCCATTATGGTAGGTATAGGATTTGTCACTTGGATCATCTCCAAAATTAAAGCCATCAAAAGCATCTCCAGCTTCGCCACCAATAAAGTAGGCATAGGTCAGTCTGTACTTGTCTTCTTCAGTTCCCACTTTGAACACGGCATAGTCAGCAGTGCTGTTAACAGAGAA .:.:..x.x:x.....xx:.....xxx.........:..:.....:..:..::.:...........x...........:..:..............:.....x..:...........:..xx....:.....x:..............x.x..:x.::.:........x........x.......:............:...........x..x......:::...........x..:..x.x.........xx......x......:.......:.........x.....:...xx..x.::... 306M 243/306 79.4% 306/94230402 0.0% 0/306 0.0% 133189353 57025202 +11208 chr4 + 190214555 154608461 154608460 154608695 235 AGTACCTGGTTCTGCCATTCCAGTCTTCCAGTTCCACTCTTAATGCATATGGGATGGCAGACTGTGTGCTTATCAAATGAATCTTCTCATTTCCCAGCCAAAATTCTGTTGTGCCAGTAGGAGACAGATGTCCAAATCCTTCTTTATATTGAATCCAGTTTTTCTTGAAATCTACACTGCCATCAAGTCTCTAATTACACATTTGCAAGAG--------CAAAAGGAGAAAATAGACTATCAA chr4 + 94230402 21418265 21418264 21418506 21418265 21418264 21418506 242 AATACCCTTTTTTGCCAGACCAGTCCTCCAATTCTATTCGCAAGGCATATGGCAGAGTGGACTGTGTAGTTATTAAATGAATCTTTTCATTGCCCAGCCAAAATTCTGTGGTGTCATCTGGTGACAGATGTCCAAATCCTTCCTTGTATTGAACCCAATTTCTCCGGAAGTCCTCACTCCCATCCAATCTCT-GTAAAACAACAACAAAAAACCAACCTCAAAAAAAAACAAAAAACAaacaa .:....:xx..:.....xx......:....:...:.:..x:..x........x.x:.::........:x....:...........:.....x.................x...:..x:x..x....................:..:.......:...:...:..:x...:..:x....x.....x.:.....-:.x.x...x:x:...:.:--------.....::.:.x..x.:..x.x... 192M1D18M8I24M 174/234 74.4% 242/94230402 0.0% 9/234 3.8% 133190196 57024359 +8022 chr4 + 190214555 154609627 154609626 154609789 163 TACCTTCTGAAACACAGTCCATCCATTTCCAGACCCATCGATTTCACAGTAGACTAAGAATTGCTGGTTAGCTTTCAGAGGTTTAATAAAGTAAAGCCCGCTCTGTTTAGCTCCCTTATTGGCAATGTCTTGACAATCTAGAG-AAGGAGAATC----GACTTTTACT chr4 + 94230402 21418614 21418613 21418781 21418614 21418613 21418781 168 TACCCTCTGTAATACTGTCCAGCCGTTGCCATATGTGTCAATCTCACAGTAGACTAGGAATGACTGCTTAGCTTTTTGAGGCTTGATGAAGTAAAGACCACTTTTTCTGGCACCTTTATTTGCAATATCTTGACAATCTGAAGTAAAGATATTCAAAGGATTGTTACT ....:....x..:..x.....x..:..x...x.:x::..:..:.............:....x:...x........:x....:..:..:........x..:..:.x.:.:..x..:.....x.....:............::..-..:..x.x..----..:.x..... 143M1I10M4I10M 123/163 75.5% 168/94230402 0.0% 5/163 3.1% 133191013 57023542 +5003 chr4 + 190214555 154611794 154611793 154612452 659 AAAATCCTTACCGAATACTTGAGTCATGTGTTAAAATCGATGCTTCATATTTCATAATTTCTTCTAACATTTTCCTGGACTTCAAAGTAGCAGCGTCTATCATATCTGTAATATAGGATCAGAGACATAAAAATCCTTAAGCAAATAGAACAACTAAAACAACAGCAAAAGAACTTCACAGATTATTATTATTATTTTTTGGTCAGTAGTCTTTATTTTCTCACTTGGTTTTGATGATTCATCAGGATTATAAGTGAGTTGGATTGCTTTTATCAGCTGTTTGACTTCTGATGTTTTGTTTTCAACTTGATGTAAGATGTCTTCCAAAGACTG-TAGATCCTTGTCTACTTTGGTTTGATAAGTAGACAGGAAATCTGCAATGCCACAGGTAGTTGGACAATAACTACCCTGAAAATATAA---------------------CAGTGATTAAAAATG--------------TAGACAGATG--CTACTCTTAAAATCTATT--AAGAAAAATAGGTAAAACCTAGAC-TATGTTTTTAAAAAGTTACAAGTGCCAGATGATATTTATG------------AGGGAATTATTTC----TATTCCT------------------------------------CTGCCCCTCTCCA----------------------------------GTTCACACACAAAG-----------------------------GGA---------------------------------------------------------------GAAACATAAAA-------ACTACTTACGAATCTTTCATCTAAGATGCAGCAGTTGTCTCTGGTAGCAACATACTAAAAGAGAAAAAATA chr4 + 94230402 21420334 21420333 21421193 21420334 21420333 21421193 860 AAGATACCTACTGTATAGTATTTTCATGAGCCAAAATAGTGTTTTCATATCTGATAATTTCTTCAATTATTTTCTTGGACTTCTGAGTCAATTGCTCAATAGATTCTGTAGAACAGA--CAAAGGTATGAAATTATT---GCAGTTTGGCAAATTAGAAAAACA-----AGACAGTGACAATTTGTT----CAATTGTGTAGTTA----TTCTTATATTCTCACGTGGTAGTGTCTGCTTCTCTGAAGGATAGATGGTTTTGATGTGTTGAATCAAATATTCTATTGATCCTGTGGAGTTAGTAGCTTGCTGCA-GAAGTCCCTCAATTTCTAACAGTTCACCATCCGTAGTGAGACGGTATTTGTTAAAGAAATCTGCAATGCCACAAGTTGTGGGGCAGTAGCTACCCTAAAGAGAAAAGAATAATAATAGATAATGTTTCAGTAGCAAAAAATGGACAACAGAATATTTGGGCAGGAGAACAATTTGTACAAATGACTGCAGGGAAAA-----AAAGCATAGACATTTGCCTATAGAGAGATTTTAGTTTCACACTGTATATATATCCACACAAAGAAAGAAATTTGTTCACGGTGTTACTTGTAGTGTCTTTAATATACTTTTATCAGCAGCGTAGCTGACTTTCTCAGCAGATGTTTACTGTTACCAGTCAAGAACACATGGGTTTAAGCACAGAGCATTTAACGAGCTTTGAAGCTAACAATGAGGATCTAATGAAACTACAAATGGCAGTTACTAAGTGGTGTAGGCAGACTTAGACTAGACTCTTAATGGAACAGAAAATGGATCTGATACTTACAAATCGCTCATCTAATATGCAGCAGTTTTCTCTGGTAGCAATGTACT-GAAGAGAAGAAACA ..:..x.:...:.x...x.xxxx.....x.::.....x.xxx:.......:.x...........x.x:......:........x:...x:xxxxx..x..x:xx......:x.:..:--..:..::..:...x.x:.---...:x.x.:xx..:..:..x....-----...xxx.x...:x..:..----:x...x.x.:..:.----.::....x.......x....xx..x:x::.:x..x.:.xx...::..:x..x...xxx..xx....:x.:..:x.:.xx.xx...xxx...xx:.:....x..:.-..x...:::...xxx..:-:..x..x:::..:::xx..:xx:.:..xx.:xxx.:..................:..x..x..:..:..:.......:..:.x.x..---------------------....:::x.......--------------.:.:...:x.--.x.:.:x..x..x:x.:.--.:.:....-----...:.x.....-.x..::.x..:.:..x.x:x...x:..x.:x:...x...:------------.:.:....xx...----.:..x..------------------------------------...x.::....x:----------------------------------...:.x:....:..-----------------------------...---------------------------------------------------------------.:....x....-------:x.......:....x:........x...........x.............::....-:.......:...:. 117M2D18M3D24M5D18M4D14M4D105M1D18M1I87M21I15M14I10M2I18M2I8M5D11M1I40M12I13M4I7M36I13M34I14M29I3M63I11M7I56M1D14M 408/634 64.4% 860/94230402 0.0% 251/634 39.6% 133191460 57023095 +4891 chr4 + 190214555 154617944 154617943 154618063 120 AGATTTCTGTGTATACTTTACCTTGAGTGGTGGAGCAGTGACCTCTACTAAGTAAACAAAGATA-----CGATTTGCAAAACCAGATTAAGTCAAAGACCCAAATATTTATTGAATGTTGTGCAA chr4 + 94230402 21424537 21424536 21424661 21424537 21424536 21424661 125 AGATTGCAATGTATGCTTTACCTTGAAGGGAAGAGCAGTGAACTCCATTTGTTAAACAAAAGCATCCACTAATTTGTGGGAATAAGATAAGTAATAAATTCAAATATTTGCTGAATATTTTGTAA .....x.x:.....:...........:x..x:.........x...:.:.x:x........:::.-----::.....::::.x:.::x.....x.x.:.::.........::.....:..x..:.. 64M5I56M 82/120 68.3% 125/94230402 0.0% 5/120 4.2% 133193407 57021148 +3259 chr4 + 190214555 154634580 154634579 154634650 71 TATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 146811316 43403239 +3473 chr4 + 190214555 154634582 154634581 154634652 71 TATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.x...:...x..:..............x:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 146811318 43403237 +3259 chr4 + 190214555 154634584 154634583 154634654 71 TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x.xx.xx..:...x..:..............x:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 146811320 43403235 +3342 chr4 + 190214555 154634590 154634589 154634660 71 TATATATATATATATATATATATATATATATATATTTT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAG chr4 + 94230402 7823264 7823263 7823338 7823264 7823263 7823338 75 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAG ..:...:.........:.:......x.:.:x.x..:..----..:...x..:..............x:...:x.. 38M4I33M 54/71 76.1% 75/94230402 0.0% 4/71 5.6% 146811326 43403229 +3145 chr4 + 190214555 154634592 154634591 154634650 59 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 121383589 68830966 +3017 chr4 + 190214555 154634603 154634602 154634641 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 129841977 60372578 +3371 chr4 + 190214555 154636315 154636314 154636384 70 TTTTTATATTTTAGGACCTGGGCTATGCTCCTGATTTTATACAGACTGCCATGGCTCCAGATATAAAAGA chr4 + 94230402 21426643 21426642 21426712 21426643 21426642 21426712 70 ttctgctattGCAGGTGTTGGGTTACGCCCCGGATTTCATCTCCACTGCCATGGCTCCATACATAAAAGA ..:.xx....x:...xx:....:..:..:..x.....:..x:xx...............x.:........ 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 133209672 57004883 +3469 chr4 + 190214555 154639070 154639069 154639147 78 ACCATGGTGCATGCCTATAGTCCCAGCTGCTAGAGAGGCTGAGGCGGGAGGATCGCTTGAGTCCAGGAGTTTGAGGCT chr4 + 94230402 76033198 76033197 76033273 76033198 76033197 76033273 76 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ..x:.......:.--.:....:......:..x..:........x.xx.x.:.x.:.....::....:..:..x:.... 13M2D63M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 78605872 NA +6312 chr4 + 190214555 154653310 154653309 154653506 197 ATTTGTAATATATTCTTTTTATATTTGAACATGTATTAAAACATTTTTCTCGCTATAGTAATGCTAGTTTTTTATTTGCTTTGCAGTCTTGCAGGCAATCTCACTGAATGTGGTACTCAGGGTACTGGTGGAATATTCACCGATTATCATTTGGTGCCAGACTGACAGGAAGCAATGAATATA-TATATATATATATA chr4 + 94230402 21436495 21436494 21436662 21436495 21436494 21436662 168 ATTTGTGATACATCCTTTTA----------------CAGAATATTTT----GTTGTTTGAACACTTGTTTTTC----------CAGCCTTGCAGGTCATCTTATTGAATGCGGTGCTCAGTGTACTGGTGGAATATTCACTGACTGGCATGTGGTACCAGACTGGTAAGTAACTGTGACAACAGCATGTATGTTTGTA ......:...:..:.....x----------------:.:..:.....----.:.:.xxx..::..x......:----------...:........:x....:.:......:...:.....x...................:..:.:x...x....:........::.:.x.:.x:...xx.:.-:..:...:.x.:.. 20M16D11M4D22M10D100M1I14M 122/167 73.1% 168/94230402 0.0% 31/167 18.6% 133216815 56997740 +3667 chr4 + 190214555 154657330 154657329 154657413 84 ACGTAGTGGTGCATGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:.--....:.:........:..::........x.xx.x...x.........:::.:..x:xx:..:...:. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 78624134 NA +11256 chr4 + 190214555 154660076 154660075 154660347 272 AAAAACGAATAATAAACTCCCAGTGAACTTTTACCCTGTAAATGACCTGATATGACACATTTGAACTTGCAGTGAACTTACACATGAACTTTCAGTTA-TCCTCTGAGAAATACAGCAGATGGAAAATAGGCAGATTTTTCAAATATTTTCAGAAGCAGG-ACTTTGACATGCTCAACAG-AGGGAACAAGGCCAGTTATCTCTTGGCAGTGTTTACTTTGCTGGCTTTGTTGCACTGCAGGCTGTTTAGTTACATTATATGCCTGAACAGAGAG chr4 + 94230402 21444514 21444513 21444781 21444514 21444513 21444781 268 AAAAGAGAACCCTAACCTTACTATGAACTTTCAGCTTGCAAATGACCCAATATGACATGTTTGAACTTAAAATGAACTTTCACATGAACTTTCAGTTAGTCTTCTTAGAAACATAGCAGATGGAAAATAGACAGATTTCTTAAATATTTTAATTTTTAAGTGCTTTGACACGTACACCAGTAAAAAACAGGGCATACTATCTGGTTTTGCTGTTTACATTGCTGATTTTATTGTCCTGCTGGA---TTAGTGACG----ATGTTTGAGCTGAGAG ....:x...:xx...x..:x.x:........:.x.:..:........::........::.........:x.:.......x..................-..:...x.....:.:................:.......:.:.........x.xxxx:.:.-:........:.:x..x...-.:::....:...xx::.....xx.xx::x.......x......::...:...:x....x..x---.....x..:----...::...:.x..... 98M1I61M1I19M1I62M3D9M4D16M 195/265 73.6% 268/94230402 0.0% 10/265 3.8% 133215562 56998993 +5034 chr4 + 190214555 154665604 154665603 154665726 123 TCAGGCGAATGCTTGTTACCATGATGGTTTCAGAGCAACTGCAGTCTGCATGATAGGAGAGCCCCAAAGCAATGGAAAAGGAAATGAGAACAGCTGAAAGTATTTTTTAAAGGTGTGTATGTG chr4 + 94230402 21446390 21446389 21446511 21446390 21446389 21446511 122 TTAGGTAGGTGCCACTTACCTTGATGGTTTCAGAGCTACTGCTGTCTGTCCGGTGGGAG-GTCCAAAGGCAGTACAAAAAGGAAAGCTCACTGCAGAAAGTATTCTCAAAAGGTTAGTATTTG .:...::::...:xx.....x...............x.....x.....:x:.:.:....-.:..x..:...:.:x....:.:..x.xxx..x..x.........:.:x......xx....x.. 59M1D63M 86/122 70.5% 122/94230402 0.0% 1/122 0.8% 133219214 56995341 +12841 chr4 + 190214555 154683528 154683527 154683869 342 GTGACTTTGTTGGGAGTTTAAGCAGAGTTCAGTAGCTATAAAGGATTTCACTAATAGGAAAAGAATAAGACAAACTCTCTGTTGACCTTTGTTTCACATTAAAATGACCGAAGTTTAACACCAAAATGACAGCTGGTTAAAACAGCTTGAGATTTCAAAGTGCTTCAGTATATATAAATATTATGACTGATCCCATAAGTGTGTTGGAAGACACTTTAAGAAAGGTCCTTGGTTTAACAGTTTTCTACCTTCTCCCATTTTGGTTGAAGGGAAGTATCACTCAAAAAAAGTTTTTTGTCTTCTGAATTTAG-AGAAATAGAATAATTTAAAACATGTAGCTGA chr4 + 94230402 21455516 21455515 21455838 21455516 21455515 21455838 323 GTGTCGTTATTTGTAGTTTAAT---AGTTCATTAGATAAGAAGTGTTCTATTAATAGCT-----------TAAATCATGTGCTGACCGTTATTACACGTTAAAATGACCAGAGTTTGACACTGAGATGACAGCTGGTTGATACAACTTGAGATTTTAAAGTACTTGAGTGTATGCAAATATTGTGACTGATCTCATAAGTGTGTTTGAAGATACTTCAAGGAACATCATAGTTCTAACAATTTATTGCAATCT-CCATTTTTGTTTGAGAATAATATTGC----AGAAGTTAGTTTATCTGCTGTATGCAGAAGATATGTAATAA-TTAGAATGTATAATCGA ...x.x..:..x.x.......x---......x...x..x:...x:..::.:......xx-----------:...::x.x..:.....x..:..x...:...........::.....:....::.:.............:.x...:..........:.....:...x...:...::.......:.........:............x.....:....:...:..x:..x.x.x.:.....:...x:.:.xx...-.......x...x:..::x.:...::.----.:..:x.xx...:...x...x..x:..-...x..:x.....-...:..::.:..:::.. 22M3D34M11D183M1D26M4D27M1I13M1D17M 233/322 72.4% 323/94230402 0.0% 21/322 6.5% 133228012 56986543 +3078 chr4 + 190214555 154702569 154702568 154702624 56 ATTTTATTAGTGTGTATGTATATGTGTATATATATATATATACATATACCTACACA chr4 + 94230402 55892176 55892175 55892231 55892176 55892175 55892231 56 ATTTTAAAAGTGTGTTTGTATATTTGTGTCTATATACATATTTATGTACATACATA ......xx.......x.......x...:.x......:....x:..:...x....:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 98810393 91404162 +3111 chr4 + 190214555 154702570 154702569 154702614 45 TTTTATTAGTGTGTATGTATATGTGTATATATATATATATACATA chr4 + 94230402 83331404 83331403 83331448 83331404 83331403 83331448 45 TTTAATCATTATGTGTGTATATGTGTATATATATATACACACATA ...x..:.x.:...:......................:.:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 71371166 NA +4329 chr4 + 190214555 154703309 154703308 154703389 81 CAGTGGTGTGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGAAAAACCACTTGAGCCCAGGAATTTGAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--...x......:............:........x.xx:x:..x.......:.....:.::..x:.....:.. 8M2D71M 62/79 78.5% 79/94230402 0.0% 2/79 2.5% 78670110 NA +4181 chr4 + 190214555 154730558 154730557 154730637 80 CAAAGCAAAATA-TTGGGCAAATGGTACTGGACTTCCAGATCAAAGATATTTCTAATTTAAAGTCATTAGTGGATGGACAA chr4 + 94230402 21473922 21473921 21474002 21473922 21473921 21474002 81 CAGGGCAAAGCACTTGGGCAGATGCTGTTGGATTTCCAGATTAAAAATGTTCCTGATTTAAAATCATTGATAGAGTAACAA ..::.....::.-.......:...x.::....:........:...:..:..:..:.......:.....::.:..xx:.... 12M1I68M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 133256636 56957919 +3324 chr4 + 190214555 154730940 154730939 154731024 85 TATATGTATATACACATATATATATACACAT------ATATATACATATATACATATATATACACACACACACATATATATATCTCCTATA chr4 + 94230402 58675362 58675361 58675452 58675362 58675361 58675452 91 TGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATA .:.x.....x.:x..x.:x..x.x.......------..::...:.....:..x:....:.:.........x..x......x.xx...... 31M6I54M 62/85 72.9% 91/94230402 0.0% 6/85 7.1% 96055578 94158977 +3648 chr4 + 190214555 154732367 154732366 154732546 180 GGGAGGCCAAAGGCAGGAAAATTGCTTGAGCTTAGGCATTTGTGACCAGCTGGGGAAACATAGTAAGATCCTGTCTCTACAAAAGAAAAAAAAAATACCTGGTTATGCATGCTTGTAGTCCCAGCTACTTGGAAGACTGAAGTGGGAGGATCACCTGAGCCTGGGAAGTCGAGGCTGCAG chr4 + 94230402 76033128 76033127 76033277 76033128 76033127 76033277 150 GGAGGGCAGAAGGCAGTAAA---------GATTAGGGACCTG------GTTTGGGAAAGTATGTAATGTCATG-------------AAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...x:.......x...---------.x.....x.::..------.:.x......xxxx....x:..x..-------------...::.x:....x::..x:....:.--......:...........:...:....:x:xx.x.:.x...:...:..::.:.:x.:x:.....:.. 20M9D13M6D25M13D25M2D67M 100/150 66.7% 150/94230402 0.0% 30/150 20.0% 78699239 NA +3164 chr4 + 190214555 154743362 154743361 154743436 75 GTGGTGCC--TGTAATATCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x--....:.x:..........::........x.x:.x...x.:........::.:..x:xx:..:..:.. 8M2I67M 53/75 70.7% 77/94230402 0.0% 2/75 2.7% 78710161 NA +26188 chr4 + 190214555 154744244 154744243 154744912 669 CTGCCCGGCGAGCTTAACTTGCCCAGCCCGGCC-CCTGCCGGAGTGGCAC-------CGGCACCTC---TCCAAGACGCCCTCTTCCCTGCAGG--ATGAAGAACCCCATGCTGGAGGTGGTGTCTTTACTACTGGAGAAGCTGCTCCTCATCTCCAACTTCACGCTCTTTAGTTCGGGCGCCGCGGGCGAAGACAAAGGGAGGAA-------------------CAGTTTTTATGAAACCAGCTCTTTCCACCGAGGCGACGTGCTGGAGGTGCCCCGGACCCACCTGACCCACTATGGCATCTACCTAGGAGACAACCGTGTTGCCCACATGATGCCCGACATCCTGTTGGCCCTGACAGACGACATGGGGCGCACGCAGAAGGTGGTCTCCAACAAGCGTCTCATCCTGGGCGTTATTGTCAAAGTGGCCAGCATCCGCGTGGACACAGTGGAGGACTTCGCCTACGGAGCTAACATCCTGGTCAATCACCTGGACGAGTCCCTCCAGAAAAAGGCACTGCTCAACGAGGAGGTGGCGCGGAGGGCTGAAAAGCTGCTGGGCTTTACCCCCTACAGCCTGCTGTGGAACAACTGCGAGCACTTCGTGACCTACTGCAGATATGGCACCCCGATCAGTCCCCAGTCCGACAAGGTATGATGTGTGACTCCCAGGGGAAGTGGGCTCCGCGGAGATGCCC chr4 + 94230402 21479074 21479073 21479751 21479074 21479073 21479751 678 ccggcccgtgtgcccgccccgccccggccggccgccTAGAAAAGCGGGGCTGTTCGGCGGCACCCCGGTTTCCTCCTGTCCTCGGCTCAGCCGGCCATGAAGAACGCGGTGCCGCAGGTGGCCTCGCTGCTGCTGGAGAAGCTGCTGCTCCTCGTCCAC-------------GTTCGGGCGCTGCCGGCGGGCACGGAGGGCGGGGAGTCGCCACCGGCCGCCTCCGGCTACTACGACACGAGCTGCTTCAGGCGGGGTGACCTGCTGGAGGTGCCGCGCACCCTCTTCGTCCACTTTGGCATCTACCTGGGCGAGAACCGTGTCGCCCACCTGATGCCTGACATCCTACCCGCCTTCACTGACGACCACCGGCAGATCCAGCGGGTGGTGACCAACAAACGGCTCATCCTGGGCGTCATCACCAAGACGGCCAGCATCCGCGTGGACACAGTGGAGGATTTTGCCTATGGCGGCAGCATCCTGGTCAACCACATGGACCGGCTGTTCAAGGACCAGGTGCTGGGCAGCGAGGAGGCTGCTTGTCGTGCAGAGATGCTGGTGGGCGCCACTGCCTATAGCCTGCTCTGGAACAACTGCGAGCACTTTGTCACCTACTGCCGCTACGGAGCACCGGTCAGCTTCCAGACCGACAAGGTAC--------AGCCCTAGGG--AGGGGGTGGCACGGGCATCCCC .:.x..x.:.x..:::x.::....x.x......-...:xx::..:..x:.-------.......:.---.:.xxxx:.:....xx.:.x..x..--.........x.x:...:.x......:x..x:.:..:..............x...x..x:.x..-------------..........:..x....::x..::....x..::-------------------.:.:.x:..:..x..x....x:...x:x..:..:...x.............x..x....x.:.x::.....x............:..x..x........:......x.......:........:::x...:.x..x......xxxx...:x.:x...x:......xx.......:..x..............:..:::...:::..............................:..:.....:..x.x:.:............:...x.....x:.::x:..x..:.xx...::...xx..:........:x..x:.xx.x..x..:.x....x.....x::..:x....:........x....................:..x.........x.x..:..x:.x...:....:::....x...........:--------.x:..:....--..x...:xx.:...:x..x... 33M1I16M7I9M3I25M2I63M13D34M19I434M8D10M2D22M 462/646 71.5% 678/94230402 0.0% 55/646 8.5% 133265170 56949385 +3029 chr4 + 190214555 154744988 154744987 154745031 44 CCATCCTTTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980311 44980310 44980354 44980311 44980310 44980354 44 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ..x...........:....x::.:..........:......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 109764677 80449878 +10835 chr4 + 190214555 154748952 154748951 154749454 503 CTTTCCTAATTTTCCAATATTTTATTTTC------CAGTTTTGTGAGACTGTGAAGATAATTATTCGTGATCAGAGAAGTGTTCTTGCTTCAGCAGTCTTGGGATTGGCGTCTATAGTCTGTACGGGCTTGGTATCATACACTACCCTTCCTGCAATTTTTATTCCATTCTTCCTATGGATGGCTGGCTAACTTCATACCCCCATGTCAGTGTGTGTATTCTGTATGTAAATATGTTTATATTTAT-AGAGCATCAATCAA-TATAAGCATTATTGAGAAAAATGTGACC---CGTAACACTGTGTTCTGGATAAAAATGTGATTAGGAATCA---CGCAAAGT---GCTTACTGTGTAAGCCCAAGAACAAAGGCTTTCTGAATCTTCTCAGGCAGTTCAGATTTAAAGCACCATCCAAACCTTGGAAATACGACAGGGTGTGGTAGAATTCAGCAATATGAGAAAACCAGCCCCTAAAATGATAGCCACAAGAGAT--TAATTGTGTTTTTTTTTCTCCT chr4 + 94230402 21480065 21480064 21480548 21480065 21480064 21480548 484 ctttctttcttttttttttttttcttttttcCTTGCAGTTCTGTGAGACTGTCAAGATGATAATTCGTGACCAGAGGAGCGTTCTTGCTTCAGTGCTTGTGGGCTTAGCATCCATCATCTGCCTGGGTCTGGCACCCTCCACCGCACTCCCCACGATCTTCATTACCTTCGTTCTGTGGATGGCTGGCTAACAGCCTGCC----TGCAGCTGTTTGTATATAGGATGT--ACACTATTGTATTTATGAGAGCACAAATTACTTGCTGGCCTTGTGTAAAGTTACTTGACCTTATGTGCCAC----TTTTAAATGCAACTCTGTCTAGAACACAGTGCACAAGGTATAGCTTACTGTGTAAGCCAAATAAT--AGATTTCCTGAAAATCTCAATACAT------TCTCACACACCTTTAAAATAATGAAAAAGTA--GGGGTGTGATGTGGTTCTGCTGCATG-----------CCTT-------TAGCCTTAAGTGATTCTGTTCATGTTCTTTTATCACCT .....:.xx....::xx.x....x....:------.....:...........x.....:..x........:.....:..:.............::x.:x....x..:..:..:..x:....:x:...::...:.:.x.x...::.x..:..::.:..:..:...x.x...x.:..:................xx.x.:..----..:x:x...x.....x:x.x....--.:.:xx..:.......-......:x...:.x-.::x:..x..:.xx.:.:xx.:x.....---:..:x...----..:.::..:x..x.x..x:...:.xx..---.:...:..---................x..x..:--..::..:.....xx.:::x.x:..x------.:.x.x:....x.:x...:xx..:...x:::--:.......:.:x::...x..x::...-----------..:.-------.....x:...x...--.:x.::....:....x..x... 29M6I165M4D24M2D16M1I14M1I28M3I8M4D28M3I8M3I23M2D25M6D31M2D26M11D4M7D14M2I22M 310/465 66.7% 484/94230402 0.0% 57/465 12.3% 133268887 56945668 +3371 chr4 + 190214555 154786787 154786786 154786869 83 CATGATGGCGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGAAGGAGAATCGCTTGAACCTGGGGGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...:...:.--......:...........::........xxxx.x...x.:........::.::.x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 78753590 NA +8426 chr4 + 190214555 154796732 154796731 154796922 191 TTTATTTTAGGAACTGCAACCATGAATGAAGAAAATATAGATGGAACAAATGGATGCAGTAAAGTTCGAACTGGTATTCAGAATGAAGCAGCATTACTTGCTTTGATGGAAAAGACTGGTTACAACATGGTTCAGGAAAATGGACAAAGGAAATTTGGCGGTCCTCCTCCAGGTGTGGATTTGTTTACAGT chr4 + 94230402 21503630 21503629 21503820 21503630 21503629 21503820 191 TCTATTGAGGCTATTGCAGATATGAATGAGGAGAATTCAGCTGCAACAAGTGAATCTGACAAAATGAGAGGTGGTAATCAGAAGGCTGCTGCCTTACTGGCCCTACTAGACAAGACTGGATACAACATGATTCAAGAAAATGGGCAAAGAAAATTTGGTGGGCCTCCACCAGGTAAGCGTTTTTTTGAGGT .:....xx:.xx.:....:x:........:..:...x:..x..x.....:..:..x::::...:.xx..:x.....x......x.xx..x..x.....x..::.:x.:..x........x.........:....:........:.....:........:..x.....x......:x.x:...x...:x:.. 191M 134/191 70.2% 191/94230402 0.0% 0/191 0.0% 133293102 56921453 +74651 chr4 + 190214555 154797806 154797805 154799708 1903 TTCAGGTTGGGAAGGTCCACCTCCACCTAGAGGCTGTGAAGTTTTTGTAGGAAAAATACCTCGTGATATGTATGAAGATGAGTTAGTTCCTGTATTTGAAAGAGCTGGGAAGATATATGAATTTCGACTTATGATGGAATTTAGTGGTGAAAATCGAGGTTATGCTTTTGTGATGTACACTACAAAAGAAGAAGCCCAATTAGCCATCAGAATTCTTAATAATTATGAAATTCGACCAGGGAAGTTTATTGGTGTGTGTGTAAGCCTGGATAATTGTAGATTATTTATTGGAGCTATTCCCAAGGAAAAGAAGAAAGAAGAAATTTTAGATGAAATGAAGAAAGTTACAGAAGGAGTTGTAGATGTCATTGTTTATCCAAGTGCAACTGATAAGACCAAAAATCGTGGTTTTGCATTTGTGGAATATGAATCTCACAGAGCTGCTGCTATGGCAAGGAGGAAACTAATTCCAGGTAAACTGAAAGGTTGTTTTTCAATA---TT------AACATTATTACAAATATGGAGAGATGATAGTACATCAGGGATC--------AATATTATCAAAATACTAATGTCACTTAAAGAAGA---------GTAAAGA----ATTGTTTGAGTAATG--AAGTAAAATAAATTACATGATTCTAAAAGACAAGAAATTGTTCCAGTAAAATGAGTCCTATTTATGATATTTTTACTGGATATATACACTTTGAGCTGTTAATTGTTGTTTAATAAAAATCCAAAGG---GCAACACTTAATTCTTCTGATAAAGATCTATCTTTGAAGTGTATTTGTTCTATTGACTCTGAAATTACATAGTAAGTTTTAGTTATTTACTTTAGTAAAAATTTTTGTGTGAATAGGAAA--CAAATGCTTAAC--CAAATTTATTGATGTGTAGTTGAGTTTCTGCTTCTCTGGGGAAACAGTTTTACTGAACATCTTTACCTTTTATTCTTTATTTTAATTCTCTTCAAATTATTATTTTTTTTTTACAGGAACATTCCAACTATGGGGCCACACCATTCAGGTAGATTGGGCTGACCCAGAGAAAGAGGTGGATGAGGAAACCATGCAGAGAGTTAAAGTTCTTTATGTAAGAAATTTAATGATCTCAACTACAGAGGAAACAATTAAAGCAGAATTCAATAAATTTAAGCCTGGTGCAGTTGAACGGGTAAAGAAACTTAGAGATTATGCTTTTGTTCACTTTTTCAACCGAGAAGATGCAGTGGCTGCCATGTCTGTTATGAATGGAAAATGCATTGATGGAGCAAGTATTGAGGTAACACTAGCTAAACCAGTAAATAAAGAAAACACTTGGAGACAGCATCTTAATGGTCAGATTAGTCCAAATTCTGAAAATCTGATTGTGTTTGCTAACAAAGAAGAGAGCCACCCAAAAACTCTAGGCAAGCTGCCAACTCTTCCTGCTCGTCTCAATGGTCAGCATAGCCCAAGTCCGCCTGAAGTTGAAAGATGCACTTACCCTTTTTATCCTGGAACAAAGCTTACTCCAATTAGTATGTATTCTTTAAAATCCAATCATTTTAATTCTGCAGTAATGCATTTGGATTATTACTGCAACAAAAATAACTGGGCACCACCAGAATATTATTTATATTCAACAACAAGTCAAGATGGGAAAGTACTCTTGGTGTATAAGATAGTTATTCCTGCTATTGCAAATGGATCCCAGAGTTACTTCATGCCAGACAAACTCTGTACTACGTTAGAAGATGCAAAGGAACTGGCAGCCCAGTTTACATTACTTCATTTGGGTAAGTTTAAAAATACTTTAAATGATGTATAATA--TGAAATTAGGAAATACTGTAGATTATTTTTAAATTCATTTATTTTGAACTCAACATTAGTGGTAAGTATGTAACATAAATTTTATCTCAATTTTATAAAGTCATGATAAC chr4 + 94230402 21504833 21504832 21506649 21504833 21504832 21506649 1817 TTAAGGTTGGGAAGGTCCTCCACCACCTCGTGGATGTGAAGTTTTTGTGGGTAAGATCCCTCGTAACATTTATGAAGACGAATTGGTCCCTCTTTTCGAGAGAGCTGGAAAGATCTATGAGCTCAGGCTGATGATGGAATTCAGTGGTGAGAATCGAGGCTTTGCTTTTGTGATGTATACTACTAAAGAGGATGCCCAGCTAGCCATCAAGATTCTTAATAATTACGAAATTCGTCCAGGGAGATTTATTGGTGTCTGCATAAGCTTGGACAACTGCAGACTGTTTATTGGAGCAATTCCaagagaaaagaagaaagaagaaatactaaaagaaatgaaaagaaTTACAGAAGGAGTGGTGGATGTCATTGTTTGTCCAGATGCCACAGACAGAACTAAAAATCGTGGATTTGCTTTTGTAGAATATGAGTCTCACAGAGCAGCTGCAATGGCCAGAAGGCGGCTACTCCCAGGTAAATC-------TATTTTTAAGTAAATTTCTGGAGGACTGTGTTTTTGGGGAGTAGAGGTGAAGGGATGT----GATCCCCTTCTTAGATTTATAGAAA-------ATCATTTTAAGAGTATCATGTGTTGGAAGGGGCTTATTCTTTGTGGAATAGAAAGTGGAAGGGATTAAAAGTATTGAAAGAGAAGGGAATAGATAAAGGTGAATAG---------ATAAAGTTAAAAAAGGAAATTTAA----TGATGTG---ACTGCCATCTA-------TGCAAAGGATTGTAGGGTTGAATTTTTGC----CAGGTCTTACTTTG----TTAATTATTTCAGGTAGTAGTATCTTACACATT-------------TTGCTTTAGA--------CTATGCAGACAAGAAATGCTGCTGTTTCGCATCATATTTGTT---------------TGCTTTTTCT----AAAGGTAGTGTATAAGAATGACTTTTCTTTTCATCTTTTTTACTGATGTTATGC----------TTCTTTGCTGTAGGAACGTTCCAGCTCTGGGGTCGTGCAGTTCAAGTTGACTGGGCATGCCCAGAGAAAGAAGTTGATGCAGAAACAATGCGGAGAGTTAAAGTATTGTATGTAAGGAACTTAATGATTTCTACTACAGAGGATACAATTAAAGCAGAATTCAACAAGTTCAAGCCACGAGTAGTTGAACGTGTAAAAAAGTTGAGAGACTATGCATTTGTTCATTTCTACAACCGAGAGGATGCAGTTGCTGCAATGTCTATAATGAATGGAAAGTGCATTGATGGAGCTAGCATTGAGGTAACACTGGCAAAGCCAGTTAACAAAGAAAGTACTTGGAAGCAGCATCTTAATGGTCATGTAAGCCCCTGTTCTGAAAATCTCATGGAATTTCGTAGCAGAGAAGACGGTCATCAAAAATCTGTAGGGAAACCTGCAAGTCTTTCACTTAGTCTTAATGGTCAGCATAGTCCAAGCTCTCCTGAACTTGAATGGTATCCATACCCATTTCTTCCAGGAGTAAAGCTTATTCCAATTAGCATGTATTCTCTAAAATCCAGTTACTTCAGTTCTGCTGTTATGCGTCTGGATTATTTTTGCTACAAAAATAACTGGTTACCACCAGAATACTACTTGTATTCAACCACAAGTCAGGATGGGAAAATACATTTGGTGTGCAAGGTACTTATTCCAAGTATTGCAGATGGTTCGCAGAGTTGCTTCATGTCACACAAACTCTGTACAACATTAGAAGATGCAAGGGAATTGGCAGCACGGATGGCACTTCTACATCTAGGTAAGCATAAATGC-TTTTGAATAGTTCTTAAGAACTGAAGCTA-GAAATGTT--------TATTTAAAATTGTTCTTTGCGTA--------TAGTTGTGGA----------AAGTTTTATTTTATTCTCCTATAGACAAGACAAC ..x...............x..x......x.x..x..............:..x..:..x......:.:..x........:..:..:..:...x.x..:..:........:.....x.....::.:x.:..x...........:........:........:.x...............:.....x.....:..x.....::.........::..............:........x.......::...........x..::.....:....:..:..:...:.:...........x.....x.::....................x:..:.x........:.:.:.............x..:.............:....::...x..x..:.::..:...........x.....x.....:........:...........x.....x.....x..:...x::...x.:.........::-------.:.....x.:..---..------:..xx.:..x:x::x:x.x....:...x:.x.::.----....--------.:xx....x:...-------:...:..x....:x.---------.x..:.:----...x....x.x...:--....::..x::....x.x.xx.:x...:::x.:.:...x.x.xx..xx:...::---------..:.x:..xxx.xx...x..x..x----...xx..---.:..:::.:..-------.x......---.:.:x::.x....:..x:----x..:...xx.....----x..x..:..::.xxx.x.xxx.xx.....:.x.-------------..:......x--------:.:..:::.:.:....--.x:x..:..x:.--..x....:..---------------.x..x:....----::.:::...x.xxxx...::x....x.:...:..::...x.x:.:..x:.x.x.----------..:...x:.::......:.....:..x.....:.:::.x:....:..x..:.....xx:............:..x....x:.....x....:............x:.x........:..:........:..x...........x....................:..:..:.....xx.x.:.........x.....:..::.x.....:.....x........:..:.x.........:........x.....x......:.x...........:..............x..:..............:..x..:.....x..:.......::.......::.................x:.x..:..xx:............x..x.x:...xx..:..:......x:.:..:.x....x..x....x..:.:xx...x....:.xx:.x....:..............:.....::.x......x.....x.:.::x.x.....x...:x...x...::........:.........:.........:.........:.:.:..:.:......x..x....:.:.........x:...x..............x:............:..:..:........x........:.........:...x:.......::...:..x.......x:x.......:....x..x.......:.......:..x.............x..:.............:....:.......x.:.x.x:..:.x..x...:.:......:x....x::-:...:...::.x:x...x.--....::..-.....::.--------.x......x.::..:x..x:.x.--------....x..:::----------..:......:.:.x.:.:x..x..x..x..:... 480M7D12M3I2M6I35M4D4M8I13M7D15M9I7M4I15M2I54M9D24M4D7M3D11M7D8M3I18M4D14M4D33M13D10M8D16M2I12M2I10M15D10M4D54M10D810M1D19M2I8M1D8M8D23M8D10M10D34M 1314/1776 74.0% 1817/94230402 0.0% 168/1776 9.5% 133292973 56921582 +19261 chr4 + 190214555 154797810 154797809 154798279 470 GGTTGGGAAGGTCCACCTCCACCTAGAGGCTGTGAAGTTTTTGTAGGAAAAATACCTCGTGATATGTATGAAGATGAGTTAGTTCCTGTATTTGAAAGAGCTGGGAAGATATATGAATTTCGACTTATGATGGAATTTAGTGGTGAAAATCGAGGTTATGCTTTTGTGATGTACACTACAAAAGAA-GAAGCCCAATTAGCCATCAGAATTCTTAATAATTATGAAATTCGACCAGGGAAGTTTATTGGTGTGTGTGTAAGCCTGGATAATTGTAGATTATTTATTGGAGCTATTCCCAAGGAAAAGAAGAAAGAAGAAATTTTAGATGAAATGAAGAAAGTTACAGAAGGAGTTGTAGATGTCATTGTTTATCCAAGTGCAACTGATAAGACCAAAAATCGTGGTTTTGCATTTGTGGAATATGAATCTCACAGAGCTGCTGCTATGGCAAGGAGGAAACTAATTCCAGG chr4 + 94230402 70839855 70839854 70840324 70839855 70839854 70840324 470 GGCTGGGACGGCCTGCACCCTCCTCGTGGCTGCGAAGTCTTTGTGGGCAAGATACCCCGCGACGTCTACGAAGATGAGCTTGTCCCTGTGTTCGAGTCTGTTGGCCGCATCTATGAGATGCGCCTGATGATGGACTTCGATGGGAAGAACCGTGGTTATGCCTTTGTGATGTACAC-ACAGAAGCATGAGGCAAAGAGGGCTGTCAGGGAGCTGAACAACTACGAAATCCGCCCAGGCAGGCTGCTGGGTGTGTGCTGCAGCGTAGACAACTGCCGGCTCTTCATCGGAGGCATTCCCAAAATGAAGAAGAGAGAGGAGATCCTGGAGGAGATCGCTAAAGTGACGGAAGGTGTACTGGATGTCATTGTGTATGCAAGCGCTGCAGACAAGATGAAGAACAGGGGTTTCGCCTTTGTGGAGTACGAGAGCCATCGAGCAGCAGCAATGGCCAGGAGGAAGCTCATGCCAGG ..:.....x..:.::.x:..x...x.x.....:.....:.....:..x..:.....:..:..::.x..:.........:.x..:.....:..:..:xxx.:...xx:x..x.....:x.x..x..x........x..:::...x:.:..:..x........:..............-...:...x.-..:..xx.:xx:..::....::xx..x..:..:..:.....:..x.....x.:.:.xx.x........:xxx...x.:..:..:..:x.::.x..:..:....x:........::x:.......:...:..:..::.:..x..:..x:xx.....x..:.....x..xx.:...........x...x....:..x:.x..:....:x..:..:x.x.....:..x........:..:..:xx:..:x....x..x..x.....x........:..x..x..... 176M1D9M1I284M 322/469 68.7% 470/94230402 0.0% 2/469 0.4% 83957955 NA +10752 chr4 + 190214555 154798779 154798778 154799097 319 CAGGAACATTCCAACTATGGGGCCACACCATTCAGGTAGATTGGGCTGACCCAGAGAAAGAGGTGGATGAGGAAACCATGCAGAGAGTTAAAGTTCTTTATGTAAGAAATTTAATGATCTCAACTACAGAGGAAACAATTAAAGCAGAATTCAATAAATTTAAGCCTGGTGCAGTTGAACGGGTAAAGAAACTTAGAGATTATGCTTTTGTTCACTTTTTCAACCGAGAAGATGCAGTGGCTGCCATGTCTGTTATGAATGGAAAATGCATTGATGGAGCAAGTATTGAGGTAACACTAGCTAAACCAGTAAATAAAGA chr4 + 94230402 70840321 70840320 70840639 70840321 70840320 70840639 319 CAGGAAGGATCCAGCTGTGGGGACACCAGATTGCTGTCGACTGGGCAGAACCAGAGATAGACGTGGACGAAGACGTCATGGAGACTGTTAAAATCCTCTATGTGAGGAACTTAATGATTGAGACCACAGAGGACACCATTAAAAAGGTCTTTGGGCAGTTTAACCCTGGCTGTGTAGAGCGGGTGAAAAAAATACGTGATTACGCCTTTGTGCACTTTACAACCAGGGAAGATGCCATCCACGCCATGAATAACCTTAATGGTGTCGAACTGGAAGGCTCGTGCCTGGAGGTTACCCTGGCCAAGCCAGTGGATAAGGA ......x:x....:..:.....x...xxx...xxx..x..:.....x..x.......x...x.....:..:..x::....x...xx......:.:..:.....:..:..:........:xx:..:........x..x......:x:.xx..:::xx.:.....x.....:xxx..x..:.....:..:...x.xx.x.....:..:.....x......x:x.x.x.:........x:.xxx:......xx.:x:x.x.....x:xxx:xx.x..x..xx.:x.:x.x.....x..x..:..:..:.....::....:.. 319M 209/319 65.5% 319/94230402 0.0% 0/319 0.0% 83958458 NA +3166 chr4 + 190214555 154826700 154826699 154826761 62 CTGGAAATTAAACCTATATTTAACTGATTTTCATTTTTCCTTTTTTTTTTTTTTTTTTCCTG chr4 + 94230402 59608075 59608074 59608136 59608075 59608074 59608136 62 CTGAAAATAGAATTTACACCCAAACCATCTCCCTTTTTCCCTTTTTTTTTTTTTTCCTCCTG ...:....x:..::..:.:::..x:x..:.:.x.......:..............::..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 95218625 NA +3817 chr4 + 190214555 154837330 154837329 154837513 184 CACTCCCCCTTTTTTATTTTTTG-AGCATATTTTTAAGGGTTGAATGGGTACGTTCTCCTATGGCCTGTCCTTGGGGGTTATACGGGATGCTGATGGAATATTGGATGTTCCAAGTGTGACAAAATTGTTGGAATTGTGAACTGGCATAAGCTGGACAATTATCAGTTTTAATTTTTGTGGGCTG chr4 + 94230402 26096503 26096502 26096685 26096503 26096502 26096685 183 CATTCCCTCTTTTTTTCCTTCAGTAGCATAGTTTTAAGGGTGCAGTGGGTATACTCAACTTTAGCTTGTCTTGTAAGCAAGTATGGTATGTCCGTGAGACGTTTAATTTCTCATGACTGTAAAAACTGTAATATTTTCTGGGATATATATGCCGAGCCATTATCTGTACAGATTGT--TGGGCTG ..:....:.......x::..:x.-......x..........xx.:......:::..xx..x.:..:....:.xx::.xxx:..:..x...::x:..::.::..x:..x.::..x.xx..xx....:...x:x.x..x:x::xxx::...x..:.::.x......x..x:x:...x.--....... 23M1I152M2D7M 108/182 59.3% 183/94230402 0.0% 3/182 1.6% 128740827 61473728 +3056 chr4 + 190214555 154883276 154883275 154883349 74 GTGCACTTGTAATTCCAGCTACCTTAGAGGCTGACGTGAGAGAATTGCTTGAGCCTAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:..........:.x.:.......xx:xx.x...x::.....:..:..:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 78850072 NA +3139 chr4 + 190214555 154926142 154926141 154926220 79 GTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCCTGAACCTAGGAGGTGGAGTTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.:...........::........x.xx:x...x.:.:......:..:..x.xx:.x:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 78892941 NA +3570 chr4 + 190214555 154946858 154946857 154946931 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCCAGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx:x...x.:.........x::..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 78913654 NA +3210 chr4 + 190214555 154952882 154952881 154952993 112 CAGAGGGGAGTGTCTTGTGGTACAGAGACGTGATCACCCCTCCACAAAGATAGGACAGAGAAGGAAACAGGAAAAAAAAAAAGAAGGTTTTTTTTTTTTTTTTTTTTTTTCA chr4 + 94230402 851700 851699 851794 851700 851699 851794 95 CAGGAGGGAATG----GGGGCACAGGGCAAAAAATGCCTGTCAATAAAAAGGGGA-------------AGAAAGAGAAAAAAGGGAGTTTTTTTTTTCTTTTTTTTTTTGCA ...::....:..----.x..:....:.xx:x:.x::..:x..x.:...:.x:...-------------..:..:.:.......:::...........:...........x.. 12M4D39M13D44M 66/95 69.5% 95/94230402 0.0% 17/95 17.9% 154101182 36113373 +3073 chr4 + 190214555 154952943 154952942 154952992 50 AGGAAACAGGAAAAAAAAAAAGAAGGTTTTTTTTTTTTTTTTTTTTTTTC chr4 + 94230402 27740776 27740775 27740825 27740776 27740775 27740825 50 AGGTAGCAGGAAAAAATAACAAATGGATTTCTTTTTTTTTTTTTTTTTCC ...x.:..........x..x.:.x..x...:.................:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 127212167 63002388 +3523 chr4 + 190214555 155003197 155003196 155003281 85 TGCGTGGTGGCGCACACCTGTAGTCCCAGCTATGTGGGAGGCTGAGGCATGAGAATCGTTTGAGCCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:::....:....:--......:.......:x..::........x.x..x...x.::....:...:.:..x.xx:..:..:.. 16M2D67M 57/83 68.7% 83/94230402 0.0% 2/83 2.4% 78970002 NA +3293 chr4 + 190214555 155013633 155013632 155013689 57 ATATATTTGTATATATGTACACATACACATGTATATACATATATGTATATGTACATA chr4 + 94230402 61270779 61270778 61270835 61270779 61270778 61270835 57 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...................:.:.::...:.::.:.x...:x:.......x.....:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 93742854 NA +3807 chr4 + 190214555 155028677 155028676 155028793 117 CTCTTTCTCCTTTCTTCCTTTCTCT--CTCCCTGCCTTCCCATCTTCCTTTTTCCTCTTCTTTTCTTTCTCCCTTCTTTCTTCTTTCTGTCTTTCCTTGCTCCTCCTTCCCTCCCTCCC chr4 + 94230402 92917627 92917626 92917741 92917627 92917626 92917741 115 CCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTG---TTCTCTG-TCCACTTTCCCTCCCTGCC .:......x.:..:.....:..x..--.....:x..:....x.....::.xxx.x......::..:.x..xxx...x..::..:x....---...::..-...x.:..........x.. 25M2I62M3D7M1D19M 80/113 70.8% 115/94230402 0.0% 6/113 5.3% 62111050 NA +3082 chr4 + 190214555 155028688 155028687 155028778 91 TTCTTCCTTTCTCTCTCCCTGCCTTCCCATCTTCCTTTTTCCTCTTCTTTTCTTTCTCCCTTCTTTCTTCTTTCTGTCTTTCCTTGCTCCT chr4 + 94230402 83326934 83326933 83327024 83326934 83326933 83327024 91 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCT ...:.::x...x.:x..::.::...:.:.x.::.....:.:::::.:.:x.::xx...:x.....x.x.:...........:...x..... 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% 71701754 NA +3386 chr4 + 190214555 155031662 155031661 155031756 95 CCATTTGAGAAATAGCCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 59382574 59382573 59382667 59382574 59382573 59382667 94 CCCTCAGGAAAATAGAGA-CAGGAACAAAAGAAAAAAGGAAAAACAAAATAAGCAAACAGAATTAAATTTCTGTTCTTTTTTCTTTTTTTTTTTT ..x.:x.::......xx.-:.::..x....:......::.....x......x::.x.:.x.xx..x..x.x.:..:......:............ 18M1D76M 65/94 69.1% 94/94230402 0.0% 1/94 1.1% 95649088 NA +3012 chr4 + 190214555 155031678 155031677 155031738 61 CAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATTTT chr4 + 94230402 22367305 22367304 22367365 22367305 22367304 22367365 61 CAGAAAAAAAAAAAAAAAATAGAAACAGAAAAGTATTTTCAAGTGTATAAATATTCATTTT ...x...............x.:...x.:....:...x.x:.x:.:....x....x:..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 132664373 57550182 +3071 chr4 + 190214555 155031685 155031684 155031735 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495050 1495000 1494999 1495050 51 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGAT ...x.:.........x.:......x........:.:..:...:.....x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 153536685 36677870 +3217 chr4 + 190214555 155031687 155031686 155031734 48 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:...............:.:..:...:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 153536687 36677868 +3064 chr4 + 190214555 155031714 155031713 155031796 83 ATATATATATATATATATATATTTTTTTTTTTTTTTTTTT--------------TTTTTGAGACGGA---GTCTCGCTCTCTCGCCCAGGCTGGAGTGCA chr4 + 94230402 24792626 24792625 24792722 24792626 24792625 24792722 97 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC---CTGGAATGCA ...................x:........x.........:--------------......::::x..---:....:x....xxx...---.....:.... 40M14I13M3I17M3D10M 64/80 80.0% 97/94230402 0.0% 20/80 25.0% 130239088 59975467 +3492 chr4 + 190214555 155050005 155050004 155050088 84 ACCTGGTGGCTCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGTAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::....:x....--....:.:...........::........x.xx.x...x::...........:.:x:xx:..:..... 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 79016809 NA +3197 chr4 + 190214555 155063527 155063526 155063581 55 AAACTTTATATATCACAAGTTATATATATATGTATATATGTATATATATATATAT chr4 + 94230402 82013229 82013228 82013283 82013229 82013228 82013283 55 AAACTTTGCACAGTAAAATTTGTATATGTATGCATATATGCATGTATACATATAT .......::.:.x:.x..x..:.....:....:.......:..:....:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 73050298 NA +3421 chr4 + 190214555 155104292 155104291 155104346 55 TGGACTAAAACAGCCCCTTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554002 6554001 6554056 6554002 6554001 6554056 55 TGTATCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ..x.::.......x:::x..x:...:............................. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 148550290 41664265 +3331 chr4 + 190214555 155104297 155104296 155104360 64 TAAAACAGCCCCTTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTT---------TTTTTTTTT--TTTTGAGATA chr4 + 94230402 38525365 38525364 38525439 38525365 38525364 38525439 75 TAAAGCCCTCCCTCTTCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTGGCTTTGAAATA ....:.xx:....:....:........:.................---------....x....--:.....:... 45M9I9M2I10M 54/64 84.4% 75/94230402 0.0% 11/64 17.2% 116578932 73635623 +3312 chr4 + 190214555 155104306 155104305 155104377 72 CCCTTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGAGATAGA----CTCTCACTCTGTCAC chr4 + 94230402 56907963 56907962 56908038 56907963 56907962 56908038 76 CCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTCACCTTATTAC ......:...:.:.x:::.........:..............:.....x.x:.x:.x----..:....::.:.:.. 57M4I15M 52/72 72.2% 76/94230402 0.0% 4/72 5.6% 98196343 92018212 +3012 chr4 + 190214555 155104309 155104308 155104344 36 TTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 + 94230402 68982956 68982955 68982991 68982956 68982955 68982991 36 TTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ....x.................:............. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 86121353 NA +3049 chr4 + 190214555 155104310 155104309 155104349 40 TTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 45847278 45847277 45847317 45847278 45847277 45847317 40 TTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..x.::...x.............................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 109257032 80957523 +3206 chr4 + 190214555 155104310 155104309 155104364 55 TTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGAGATAGACT chr4 + 94230402 6554016 6554015 6554070 6554016 6554015 6554070 55 TTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAGGAATACACT ...x.:x................:.:...............xx.x.::...x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 148550294 41664261 +3001 chr4 + 190214555 155104317 155104316 155104356 40 TTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 84450336 84450335 84450375 84450336 84450335 84450375 40 TTTTCTCTCTCTCTCTTATTTTTTTTTCTTTCTTTTCTGA ..:..............x.........:...:....:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 70653981 NA +3121 chr4 + 190214555 155120297 155120296 155120356 60 TACATTTCCAAGTGGGGAGAGAGAGAGACAGATATATATATATATATATATATAGAGAGA chr4 + 94230402 61196666 61196665 61196725 61196666 61196665 61196725 60 tatatatataGAGAGAGAGAGAGAGAGATAGATATTTATATAGACATAGATATAGATAGA ..:..x.x:.::x:.:............:......x......x.:...x.......x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 93923631 NA +3139 chr4 + 190214555 155136231 155136230 155136298 68 AAAACAAAAAAATAGGAAGAATACAATAAAAAAGAAAAATAATATGTAATACATTGTGACATTCACAT chr4 + 94230402 24350467 24350466 24350534 24350467 24350466 24350534 68 AAGACAAAAAAATGCAAAAGGCAAAAAGAAAAAAAAAAATAGAATGTAATTCATTGGGACTTGCAAAT ..:..........:x:..::::.x..x:.....:.......:x.......x.....x...x.x..x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 130785764 59428791 +3004 chr4 + 190214555 155151847 155151846 155151901 55 AATGGAGTCACTAGTGTTTTTTTGTTTGTTTGTTTTTTAAGAAAAAAAAAAAAAA chr4 + 94230402 50017133 50017132 50017187 50017133 50017132 50017187 55 AAAGCATTCAGTGTTGCTTTTTTGATTGTTTGTTTTTGTAAAAAAAAAAAAAAAA ..x.x.x...x.:x..:.......x............xx.:.............. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 105134714 85079841 +3022 chr4 + 190214555 155172673 155172672 155172712 40 ATCTTTTCATTTTTTTTTCTTTGCTTTTTAAACTTCATTA chr4 + 94230402 47397310 47397309 47397349 47397310 47397309 47397349 40 ATCTTTTCTTCTTTTTTTCTTTGCTTTTTAAAATTTATTA ........x.:.....................x..:.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 107775363 82439192 +3173 chr4 + 190214555 155173032 155173031 155173124 93 TAGCACTCCATGGTATGTGTGTGTATATATATGTATATATATGTGTGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGTGTG chr4 + 94230402 86633899 86633898 86633991 86633899 86633898 86633991 93 TAGCACTCCAGGAAAAGACAAAGAATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..........x.:x.x.xxx:x.x..:x:::..::.:::..x..:.:...x......:...:....:......::.x.:....::.x...:.. 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 68539133 NA +3560 chr4 + 190214555 155173047 155173046 155173156 110 TGTGTGTGTATATATATGTATATATATGTGTGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGTGTGTATATGTGTGTGTGT---------GTTTATGTGTGTGTGTA chr4 + 94230402 21109210 21109209 21109328 21109210 21109209 21109328 119 TGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ....x.:....x........:x:.:..:.::x:....::x....:..:....:x:..::x.x.:.:.:.:.....:..x.....::..:::::---------....x....x....::. 93M9I17M 69/110 62.7% 119/94230402 0.0% 9/110 8.2% 134063837 56150718 +3895 chr4 + 190214555 155173064 155173063 155173182 119 GTATATATATGTGTGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGTGTGTATATGTG----------TGTGTGTGTTTATGTGTGTGTGTATATATATGTATATATCACATTTTCTT chr4 + 94230402 89812946 89812945 89813071 89812946 89812945 89813071 126 GTTTATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAATCTCAAGTTTTT ..x.....:.xx....x....---::..:.:x:..x....:.......x.:x:..:x.xx:..:.....----------..:..:....:x...........:.........x..x...x..xx..:.. 21M3D45M10I50M 82/116 70.7% 126/94230402 0.0% 13/116 11.2% 65360118 NA +3739 chr4 + 190214555 155173065 155173064 155173181 117 TATATATATGTGTGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGTGTGTATATGTGTGTGTGTGTTTATGTGTGTGTGTATATATATGTAT-------ATATCACATTTTCT chr4 + 94230402 21109194 21109193 21109317 21109194 21109193 21109317 124 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCT ....:..:.....x.x....x:::...x.:.:.:..:x:.::....:x:....::x.:.:::.....::x::..:x.:.:...:.:.......:x.....:..-------.x..:...x..... 103M7I14M 73/117 62.4% 124/94230402 0.0% 7/117 6.0% 134063871 56150684 +3040 chr4 + 190214555 155204192 155204191 155204234 43 AAGGTGAGGGGAAAAAAAAAAAAACGAAAAAGCTAGCTTTCTG chr4 + 94230402 26800352 26800351 26800394 26800352 26800351 26800394 43 AAGGAGAGGGGAAAAAAAAAAAAAAAAGGAAGCGAGCTTTCTG ....x...................x:.::....x......... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 128403840 61810715 +3219 chr4 + 190214555 155206952 155206951 155207012 61 AGAGTACTTTCTTAAGGAAAAAACAAACAAAACAAAACAAAACAAAAACAACTACTAAAAG chr4 + 94230402 45244329 45244328 45244389 45244329 45244328 45244389 61 AAAGTGCTGTGCAAAGGAAAAGATAAATAAAACAAAACAAAACCACCACCACCACCAAAAG .:...:..x.x:x........:.:...:...............x.xx..x..:..:..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 109962623 80251932 +3221 chr4 + 190214555 155206959 155206958 155207035 77 TTTCTTAAGGAAAAAACAAACAAAACAAAACAAAACAAAAACAACTACTAAAAGACTTTAAGTGGAACTGTGTAGAA chr4 + 94230402 5997375 5997374 5997449 5997375 5997374 5997449 75 TTTATTTAAAAACAAACAAACAAAACAAAACAAAAAAAAAGCAGTAGATAAGAACCATTAAGC--AACCATCTAGAA ...x..x.::..x......................x....:..::x:x...:.:x.x.....:--...::.x..... 63M2D12M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 149209584 41004971 +3205 chr4 + 190214555 155213829 155213828 155213882 54 GTTTTCCTCGTTCCATTGGTTTTTGTTGTTGTTGTTTTGTTTTATTTTGTTTTT chr4 + 94230402 23298691 23298690 23298744 23298691 23298690 23298744 54 GCTTTTTTTACTTTTTTAGTTTTTGTTGTTGTTGTTTTGTTTTGTTCTCTTTTT .:...::.:::.::x..:.........................:..:.x..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 131915138 58299417 +61427 chr4 + 190214555 155213894 155213893 155215123 1230 TGTAGACTCTTGTGCTGGT------TGCAGGCCAAGTGGACCTG-TACTGAAA--ATGGGTCCAATAGGTGCAGAGGCTGATGAGAACCAGACAGTGGAAGAAATGAAGGTGGAA------------CAATACGGGCCACAA---ACAACTCCTAGAGGTGAACTGGTCCCTGACCCTGAGCCAGAGCTTATAGATAGTACCAAGCTGATTGAGGTACAAGTTGTTCTCATATTGGCCTACTGCTCCATCATCTTGCTTGGGGTAATTGGCAACTCCTTGGTGATCCATGTGGTGATCAAATTCAAGAGCATGCGCACAGTAACCAACTTTTTCATTGCCAATCTGGCTGTGGCAGATCTTTTGGTGAACACTCTGTGTCTACCGTTCACTCTTACCTATACCTTAATGGGGGAGTGGAAAATGGGTCCTGTCCTGTGCCACCTGGTGCCCTATGCCCAGGGCCTGGCAGTACAAGTATCCACAATCACCTTGACAGTAATTGCCCTGGACCGGCACAGGTGCATCGTCTACCACCTAGAGAGCAAGATCTCCAAGCGAATCAGCTTCCTGATTATTGGCTTGGCCTGGGGCATCAGTGCCCTGCTGGCAAGTCCCCTGGCCATCTTCCGGGAGTATTCGCTGATTGAGATCATCCCGGACTTTGAGATTGTGGCCTGTACTGAAAAGTGGCCTGGCGAGGAGAAGAGCATCTATGGCACTGTCTATAGTCTTTCTTCCTTGTTGATCTTGTATGTTTTGCCTCTGGGCATTATATCATTTTCCTACACTCGCATTTGGAGTAAATTGAAGAACCATGTCAGTCCTGGAGCTGCAAATGACCACTACCATCAGCGAAGGCAAAAAACCACCAAAATGCTGGTGTGTGTGGTGGTGGTGTTTGCGGTCAGCTGGCTGCCTCTCCATGCCTTCCAGCTTGCCGTTGACATTGACAGCCAGGTCCTGGACCTGAAGGAGTACAAACTCATCTTCACAGTGTTCCACATCATCGCCATGTGCTCCACTTTTGCCAATCCCCTTCTCTATGGCTGGATGAACAGCAACTACAGAAAGGCTTTCCTCTCGGCCTTCCGCTGTGAGCAGCGGTTGGATGCCATTCACTCTGAGGTGTCCGTGACATTCAAGGCTAAAAAGAACCTGGAGGTCAGAAAGAACAGTGGCCCCAATGACTCTTTCACAGAGGCTACCAATGTCTAAG---------------GAAG--------CTGTGGTGTGAAAATGTATGGATGAATTCTGAC chr4 + 94230402 21626150 21626149 21627423 21626150 21626149 21627423 1274 TGTGCATTCTTGTGTTGTTCTGTTTTTCAGGGACAGCGCTATTGCTACTGAAAGGATGGGGCCCCTGGAAGCAATTGGTGAAGAAAACCAGACAG---ATGAAATGAAGATGGAGTTGTTCACCAAGCTGTATTTGCCAAGATACACCACACCAGTCAGTGAACTGGCTCTTGACCCCAAACCAGAATTGAAGGACAGCACAACTCTAGTTGAGGTGCAGATAATCCTCATCTTTGCTTACTGTTCCATTATTCTGTTGGGGGTGATCGGGAACTCTCTTGTGATCCACGTGATCATCAAGTTCAAAAGCATGCGTACAGTGACCAACTTCTTCATCGCCAACCTGGCTGTGGCTGATCTGCTGGTGAATACATTGTGCTTGCCTTTCACTCTAGTTTACACACTATTGGGTGAGTGGAAACTGGGCCCGGTTTTGTGCCACTTGGTGCCTTATGCCCAAGCTCTTGCTGTGCATGTGTCTACTGTTACATTGACTGTGATTGCCTTGGATCGACATCGTTGTATTGTCTATCACTTGGAAAGCAAAATCTCTAAGCGTATCAGCTTCCTGATTATAGGAGTTGCATGGGCAGTCAGTGCCCTGTTAGCAAGCCCTTTGGCTATCTTCCGCGAGTACTCGCTGATTGAGATCATTCCTGACTTCAAGATTGTGGTTTGCTCTGAGAAGTGGCCAGGGGAGGGGCAGCTTAACTACGGCACCATCTACAGTGTCTCCATGCTCCTGATCCAGTATGTACTACCTCTGGCCATCATCTCCTATGCCTACACCCGCATATGGACCAAGCTTAAGAACCATGTTAGTCCTGGGGCAGGGAACGACCACTACCACCACCGGCGTCAGAAAACCACCAAGATGCTGGTTTGCGTGGTTGTTGTGTTCGCTGTCAGTTGGCTTCCATTCCATGCCTTCCAGCTAGTCAGTGATATTGACAGTCAGGTGTTGGACCTGAAAGAGTATAAACTGATCTACACGGTGTTTCATGTCATTGCCATGTGCTCAACATTTGCTAACCCCCTTCTCTATGGCTGGATGAATAACAACTACAGGACGGCCTTCCTCACAGCTTTTCAGTGTGAGCAGCGGCTAGACTCCATCCACCCTGAAGTGTCAGCAGCTTTCAAAGCCAGGAAGAAACTGGAAGCAAAGAAGAGCCAGTTCCCTGGAGATTCTTTCACACAACCTACCAATGTCTAAGATTTTGGACTTTAAAGAAGAAATGCACATGTTGTGGGCAAAGGAATAAATCCATTCTGAC ...:x.:.......:..x.------.x....xxx..:.xxx:..-........--.....x..xx.:.:x...:xx.x...x..:..........---.x.........:....:------------.x:..:xx....x:.---..x..x..x:xx:.........::.:......::.:.....::.x.x:..:..:..x.xx..::.......:..::.x:.:.....x..x..:.....:.....:..::..:.x.....:..:..x.....::.x........:...:.x.....:.....:........:.....:........:.....:.....:...........x.....x:.......:..x:....::.:..x........x:::..:..x:..x....x.........x....:..x..::........:.......:........:.x:..x..x..:..x..:..:..x:.:..x.....x..:......:....:..:..:x.x..:..:.....:...:.:..:.....:.....:.....x.................x..xx.x..x....xx:...........:.:.....:..::....:........x.....:.................:..x.....::.........::..:x....:........x..x....:.x..xx:.x...:.....::....:...x.:..:x:x:.x:.....:x......x:.:.......x...:..x..x.x.x.......:.....x....x:..::.x...........:........:..x.x:..:...........:..x..:x.x..:...........:........x..:.....x..x.....:..x.....:.....x..x:................x.:.:x...:........:.....x:..........:.....:.....x....x...:.....:..::....:...........x..x.....:..:.......................:.:.........:.x...:......x.:..:..:.:x............:.:..:x....:...:....:.....x.:::.x.....:..:.::.....x.....:.:x.::....:.x:xxx...:::x..:.........x.:x...............---------------....--------x...x...x.x...x.x..::..xx........ 19M6I19M1I8M2I40M3D17M12I15M3I1072M15I4M8I33M 914/1227 74.5% 1274/94230402 0.0% 50/1227 4.1% 133587744 56626811 +5067 chr4 + 190214555 155214083 155214082 155214242 160 GGTACAAGTTGTTCTCATATTGGCCTACTGCTCCATCATCTTGCTTGGGGTAATTGGCAACTCCTTGGTGATCCATGTGGTGATCAAATTCAAGAGCATGCGCACAGTAACCAACTTTTTCATTGCCAATCTGGCTGTGGCAGATCTTTTGGTGAACACT chr4 + 94230402 306801 306800 306957 306801 306800 306957 157 GGTGCAGGCACTGCTGATCATAGCTTACTCAGTGATCATCTGCATCTCCCTCTTTGGAAACACCCTGGTGTGCCACGTGGTGATCAAGAACAAGAGGATGCACTCTGCCACCAGCCTCTTCATCGTCAACCTGGCCGTGGCTGA---TGTGATGATCACT ...:..:.:xx.x..x..xx.:..:....xxx:x.......xxx.:xxxx.xx....x...x..:.....xx...:...........:xx......x....:.x.x.:x....:.:.:.....:.:...:.....:.....x..---.x..:...x.... 144M3D13M 105/157 66.9% 157/94230402 0.0% 3/157 1.9% 154907282 35307273 +3238 chr4 + 190214555 155214282 155214281 155214391 110 GAGTGGAAAATGGGTCCT-------GTCCTGTGCCACCTGGTGCCCTATGCCCAGGGCCTGGCAGTACAAGTATCCACAATCACCTTGACAGTAATTGCCCTGGACCGGCA-CAGGTG chr4 + 94230402 333516 333515 333633 333516 333515 333633 118 GAACAGCACATGGATCTTTGGGAAGGTGATGTGCCATGTCAGCCGCTTTGTGCAGTACTGCTCGCTACACGTCTCCACACTCACCCTGACAGCCATCGCCCTGGACAGGCACCAGGTG ..:::.x.x....:..:.-------..xx.......:x.x:xx.x..x..:x...x:.:xxx.:x....x..x......x.....:......:x..:.........x....-...... 18M7I86M1I6M 75/110 68.2% 118/94230402 0.0% 8/110 7.3% 154880766 35333789 +3960 chr4 + 190214555 155223090 155223089 155223172 83 CATGGTGGCATGCACCTGTAGTCCCAGCTTCTTGGGAGGCTGAGGCAGGAGGATTGCTCGAGCCCAGAAGTTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:......x....::........x.xx.x.:.x::..:..:........:..x:.....:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 79189893 NA +3766 chr4 + 190214555 155225999 155225998 155226072 74 GTGCACCTGTAATCCCAGCTACTTAGGAGGTTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:..........:::...:....x.xx.x...x...........:.:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 79192795 NA +5519 chr4 + 190214555 155310293 155310292 155310432 140 TATATATATATATATATATATATATATATTTCTTCATATATATA---TATATACACACACACTATATATATGAAGCAATTTATATATATATACACACACGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATTGCCCAGTGTCA chr4 + 94230402 44243186 44243185 44243320 44243186 44243185 44243320 135 tatatatata-atgtatatatatatataatatataatatatataatgtgtgtgtgtgtata-tatatatat------atatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGATTTAGTGTCA ..........-..:..............x.x:x.x.........---.:.:.::::::.:.-.........------..x......:.:.x........::::::..............x........x..x::::....... 10M1D33M3I14M1D9M6D66M 100/132 75.8% 135/94230402 0.0% 11/132 8.3% 111067107 79147448 +3478 chr4 + 190214555 155328426 155328425 155328509 84 TCATATATGTATGTATATATATATGTGTATATATATATATGTGTGTGTATATATATATGTATATATATACACACATACATACAT chr4 + 94230402 85834532 85834531 85834615 85834532 85834531 85834615 84 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:..x:..x.:...x.:.:.:.:.....:.:...xx..:.:x.::.::....:..x..::..:.x...:..........:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 69493894 NA +3285 chr4 + 190214555 155328430 155328429 155328506 77 ATATGTATGTAT-------ATATATATGTGTATATATATATATGTGTGTGTATATATATATGTATATATATACACACATACATA chr4 + 94230402 43288468 43288467 43288551 43288468 43288467 43288551 84 ATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGACTAACATGCTTA ...:........-------.....:....:..x..::..........x...::.......x:x..x..x.x..xx....:.x.. 12M7I65M 58/77 75.3% 84/94230402 0.0% 7/77 9.1% 112039962 78174593 +3415 chr4 + 190214555 155330529 155330528 155330634 106 ACATATTTACACATATTTGCATGTGTGTATATATATATACATATACACATAATATAAATATTTAGCAAAATAGAAAAATTTGACAAATATACATTAAAAACTCTAC chr4 + 94230402 44815601 44815600 44815697 44815601 44815600 44815697 97 ATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACAATATAAA---TTAACTAAAC------ATGTTACTAGGATACATCAGGAAAACCAC .::.:.x.:..:.:..x..x............x.:.x....:.......:........---...:.x...:------..x.x..x.:x......:.::..xx.:.. 58M3D10M6D29M 69/97 71.1% 97/94230402 0.0% 9/97 9.3% 110514928 79699627 +3322 chr4 + 190214555 155336998 155336997 155337143 146 TTCCTATATCTCACAAAAAACTATGTATTTTTGGTGTCCTTGGAATTTTTTTCTTTTTTTTTTTTTTTTTGCAAGACAGAGTGTTGCTCTGTCGCCCA--GACTGGAGTGCAGTGACACGATCTCCGCTCATTGCAGCCTCTGCCTCC chr4 + 94230402 64316184 64316183 64316321 64316184 64316183 64316321 138 TTCCAGCATCTATGAAAAA----TACATTCTTGGTATCTCTGAGATTTTTTTACTTTTTTTTTTTTTT-----AAACAAGATTTTGCTCAAGTATATAGTGACTAGGGCAGCTTGAAAGTATGTTTCTTAATTGCAGCTTTT-CCTCC ....x::....xxx.....----.::...:.....:..::..::........x:..............-----.:...:::.x......x:x:::x:.--....:.:.::xxx...x.xx..x.::x:.x........:.:.-..... 19M4D45M5D25M2I42M1D5M 89/136 65.4% 138/94230402 0.0% 12/136 8.8% 91020814 NA +8165 chr4 + 190214555 155352909 155352908 155353081 173 TACCATTTCTCAACAGCAGTTAAATTATCTTTCTTTTTCTCGGCAACAGTTTCCTCCTCTTTCTGTTTCTTTGCTCTTTCATATTCTCTCTCCTTTCTATTTTTCTCTTTAAGATATTCCATCTTTTTCTCTTTCCATTTTTCAAAAGCCTGAAAAAGTT--CAGAATAATTTTC chr4 + 94230402 21704032 21704031 21704206 21704032 21704031 21704206 175 TACCATTTTTCAACTGCTGATATGCTGTCTCTCTTCTTTTTTGCAGCTAGTTCCTCTTCTTTTTTCTTTCTGATTCTTTCAGACTGTTTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTTCAAACGCCTAAAGAAAATAACAGATTAATTATC ........:.....x..x.x..x::.:...:....:..:.:x...:.x:x......:.....:.x:..::.x::.......x.:.x.:.:....x...:::..x....:.x.:......:..:.......................x....:..:..:x.--....x.....x.. 160M2I13M 125/173 72.3% 175/94230402 0.0% 2/173 1.2% 133648877 56565678 +3373 chr4 + 190214555 155352947 155352946 155353065 119 CTCGGCAACAGTTTCCTCCTCTTTCTGTTTCTTTGCTCTTTCATATTCTCTCTCCTTTCTATTTTTCTCTTTAAGATATTCCATCTTTTTCTCTTTCCATTTTTCAAAAGCCTGAAAAA chr4 + 94230402 65413482 65413481 65413598 65413482 65413481 65413598 117 CTCTGCTTTGATTTCTTTCTTTCATGGCTTCATAACAGCTCCATGTGTTCTTTTCTTTCTTTTTATCTCTGTCAGCTTTTCATTCTTTTTTTCCTACCATTTATC--TAGCCTTAACAA ...x..xx:::....:.:..:.:x:x.:...x.x:.xx:.:...:.x:...:.:......x...x.....x.x..x.x...xx.......:..:.x......x..--x.....x..x.. 105M2D12M 76/117 65.0% 117/94230402 0.0% 2/117 1.7% 89939465 NA +8578 chr4 + 190214555 155353159 155353158 155353414 256 ATGTGCAAAGTTCTGAATACTTGTAGTGCTTCTCCTTTTCTTGCAGCATTTTCTTCTTCAGTTTTCTTCTTGTTTTTTTCTTCAAGCCTCTTTTTGGCAGCTATTTTCTTTGCTTCCTTTTCTTTCATAGCCTTCCAGGCCTCAAATGATGCTAATGCTTCTTCTCTTTTAGCAGCTTTTTTCTACAGTGGAAAAAATAATAGAGTGATATACATATATATGTATATATACATAGACACAAATATGGCTAGATATA chr4 + 94230402 21704791 21704790 21705040 21704791 21704790 21705040 250 ATGTACATACTTCACATTACCTTCTGTGCTGCTTCTGCTCTCTCTGCATTCTGTTCTGCTGCTTCCTTTTCCTTAAGTTTCTCAAGCTTCTTTTTTTCATTCAGCTTCTTTGCTTCTTTTGCTTTCATTGCTTTCCAGGTTTTAAAAGATGCATTTGCTTCCTCTCTTTTAACAGCTTCTTTCTAGATCAAAAAATATCAT-TCTCAATTTAAGTACATTTGAATATA-----AAGTACAACTATAATTGAAAACA ....:..x.x...xx.x...:.x:x.....x..:..x:...:x.x.....:.x....x.x.:..:...:.:x..xxx..::......:.......xx..x::.x:...........:...x.......x..:.......::.:...x.....xxx......:.........:......:......x.x:::....x..x..-xxx::..x..x:..:..x..x.....-----.:::....x...:::.::.x.:. 201M1D26M5D23M 168/250 67.2% 250/94230402 0.0% 6/250 2.4% 133648368 56566187 +5958 chr4 + 190214555 155355682 155355681 155355883 202 TTCTTCTTCTCTTAAAAATATTTTCCTTTTTTACCTGATAAACAGCTGCCCTTATGTTATCTGCTCTATCAGGTTCTATGCTCTGTTTCTGTGAAGGTTTTTGGTCCAAGACTTTTAAAGTCCCTAAATAGTGAGAAGAGGTAGTTGTCGATGGAGTTCTCCTTTTAGAACT-----------AGATTTCTTCAAAAACTCAGAGGTCATTAA chr4 + 94230402 21706271 21706270 21706476 21706271 21706270 21706476 206 tttttttttttttttttgtatttttaaaatCTACCTGGAAAACAGCTGCTCGCAAACTATCTGCTTTGTCAAATTCTGTACTGTTCTTCTGCAAGTGTTTATCCTCTAACACCTTTAATGTTCCCAAATAGTGAGGTGGAACAGCTTTCACT----TTTTCCTT---GAACTGTGCAGAAGACAGATGCCTACAAAGACATAAATATTATTAA ..:..:..:.:..xxxx:......:xxxx.:......:x..........:.x:.x::........:.:...::....:.:..x.x:.....::.:x....x.xx..:..x..:.....x..:..:..........:x.::::..:.x..:x.----..:.....---.....-----------....x:..x....:..x:.:.x:.:..... 152M4D8M3D5M11I30M 129/195 66.2% 206/94230402 0.0% 18/195 9.2% 133649411 56565144 +3299 chr4 + 190214555 155369303 155369302 155369366 64 TGGGTAATAAGAGCAAAAATCCATCTAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAA chr4 + 94230402 91541686 91541685 91541749 91541686 91541685 91541749 64 TGAGTGGTAGGAAGAAAAAACATTTAAAACAAAAAACAACAAACAAACAACAACAACAACAAAA ..:..::..:..:x.....x.xx.:x...x......x..x..x..................... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 63827617 NA +3130 chr4 + 190214555 155369315 155369314 155369380 66 GCAAAAATCCATCTAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAAACAAAGTAA chr4 + 94230402 49372032 49372031 49372097 49372032 49372031 49372097 66 GCACAAGTCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAACCCAATAA ...x..:..x.xxx..x...x......x...xx....:..:..................xx.:... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 105997283 84217272 +3529 chr4 + 190214555 155369326 155369325 155369375 50 TCTAAAAAAAAAAAAAAAAC-CAAACAACAACAACAACAAAAAAAAAACAA chr4 + 94230402 4563805 4563804 4563855 4563805 4563804 4563855 51 TCTAACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAA .....x.............:-......:...................x... 20M1I30M 46/50 92.0% 51/94230402 0.0% 1/50 2.0% 150805521 39409034 +3243 chr4 + 190214555 155369328 155369327 155369391 64 TAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAAACAAAGTAAAGAAACAGTTG chr4 + 94230402 17617510 17617509 17617572 17617510 17617509 17617572 63 TGAAAGAGTAAAGAAAACCAA-CAACAACAACAAAAAAAAAAAAACAACACATGAAAAAAGCTG .:...:.:x...:........-............x.............x::.x::...x..:.. 21M1D42M 49/63 77.8% 63/94230402 0.0% 1/63 1.6% 137751818 52462737 +3079 chr4 + 190214555 155369329 155369328 155369368 40 AAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAA chr4 + 94230402 18496619 18496618 18496658 18496619 18496618 18496658 40 AAAAAAACCAAAAAAACCAAACAACAACAACAAAAAAAAA .......xx........................x...... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 136872710 53341845 +3248 chr4 + 190214555 155369338 155369337 155369513 176 AAAAAAACCAAACAACAACAACAACAAAAAAAAAACAAAGTAAAGAAACAG--TTGTCATCCTGAAAGTAACCA----GTCACAAG---AAGTTAACTCTTCAACATTGTGAACTCTTATAATATTAAAAAAAAAAT--------GTTAAAAATAAAAAAACAAAACAAAATCTTGCCCCAGTTTCTACCACT chr4 + 94230402 24125116 24125115 24125295 24125116 24125115 24125295 180 AAAACAAACAAACAACAACAACAACAAAAAAAAAAC---------ACACAGCTCTTTCATAAT-AAAGCACCCACCTTGCCACAAGCACAGACCAAATTCTGAATGTCCTGATTCCTTTCCTGTCTCCTTAAAATATCCTCTTTCCTTaaaaaaaaaaaaaaaaaaaaaaGCTTTGCTCTA---CCTACCCCT ....x..x............................---------.x....--:.x....xx.-....:.x...----.:......---.::::..x.::.x..::.:x...x::...x:xxxx:.xxxx....x..--------x.......x.......x....x...:::....:.:.---:.....x.. 36M9D6M2I10M1D10M4I8M3I48M8I36M3D9M 115/163 70.6% 180/94230402 0.0% 30/163 18.4% 131244222 58970333 +3257 chr4 + 190214555 155374199 155374198 155374281 83 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGGAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x......:.........::::.......:xxxx.x...x..........::.:..x.xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 79341002 NA +3109 chr4 + 190214555 155389455 155389454 155389504 50 CAAAAAAAACAGAAACAAACAAACAAACAAAACCACAAAAACCTTTAATA chr4 + 94230402 27572558 27572557 27572607 27572558 27572557 27572607 50 CAAAACAATCTAAAACAAACAAACGAACAAAACCACAAACAACTCTAACA .....x..x.x:............:..............x.x..:...:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 127816897 62397658 +3012 chr4 + 190214555 155389456 155389455 155389499 44 AAAAAAAACAGAAACAAACAAACAAACAAAACCACAAAAACCTT chr4 + 94230402 74462608 74462607 74462651 74462608 74462607 74462651 44 AAGATAAACAAAAACAAACAAACAAAAAAACCCACAACAACCTT ..:.x.....:...............x...x......x...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 80926848 NA +3008 chr4 + 190214555 155391342 155391341 155391411 70 AAAAAAAAAAAAAAAGAAAAGAAAGAGAAAGAAAGTAAAAAAAAATTTAAATAAAAAACAGTATTTGCAA chr4 + 94230402 72824140 72824139 72824209 72824140 72824139 72824209 70 AAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAAATAATCATATTCAA ....:..:............::..:..x......:..x.:x:..xx.....x.....xx.x:..x.x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 82567202 NA +3806 chr4 + 190214555 155392076 155392075 155392230 155 GGGAGAGGGAGAGGCAGAGAGAGAGGG---------AGAGGGGGAGAGGGAAAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGAGAGAGAGAGAGGGAGAGACAGAGAGAGAAAGAGGAAGGAGGGAA--------GGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAGG chr4 + 94230402 51148345 51148344 51148516 51148345 51148344 51148516 172 GGGAGAGCACGGGGCTGTGGCAAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG .......x:x.:...x.x.:x.:.x..---------.:..::.:..xx:x.:.............:...:.....::xx....:xx::.:x.::.x.x....:.xx.....:.:...::.:..:.::..:.--------x....x.x.:...:......x.x.xx::..... 27M9I95M8I33M 96/155 61.9% 172/94230402 0.0% 17/155 11.0% 104243731 85970824 +3220 chr4 + 190214555 155392193 155392192 155392279 87 GGGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAGGGAAGG-AAGAAAGAGAAGAAAGAAGAAAGAAAGAAAAAGAGAGAGAGGAA chr4 + 94230402 58935726 58935725 58935813 58935726 58935725 58935813 88 GAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAA .:....:..:x.:x..xx:...:.:::x.:::....:....::-.......x:...:.........x..x.x..::..:.:....... 43M1I44M 57/87 65.5% 88/94230402 0.0% 1/87 1.1% 96456467 93758088 +3432 chr4 + 190214555 155392198 155392197 155392267 70 GGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAAGAAAGAGAAGAAAGAAGAAAGAAAGAAAAA chr4 + 94230402 11181429 11181428 11181498 11181429 11181428 11181498 70 GGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAA ...x...::......x.x.x...x:..:.x:..:..x.x.....:....:.:.:....x........... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 144210769 46003786 +3119 chr4 + 190214555 155392211 155392210 155392264 54 GAGGGAGGGAGGGAAGGAGGGAAGGAAGAAAGAGAAGAAAGAAGAAAGAAAGAA chr4 + 94230402 59767334 59767333 59767387 59767334 59767333 59767387 54 GAGGAGTGGGGGGGGGGGGGGGATGAGAAAAGAAAAGAAAAAAGAAATAAAGAA ....::x..:...::..:...:.x..::.....:......:......x...... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 95624877 NA +3135 chr4 + 190214555 155399708 155399707 155399760 53 TCCACCTCAAAAAACAAAACAAACAAAAAACAAAACAAAACAAAAAAAGCAAC chr4 + 94230402 71156593 71156592 71156645 71156593 71156592 71156645 53 TTCAGGTTAAAAAAACAAACAAACAAAACACAAAACAAAACAGAAAAAAGAAC .:..xx.:......xx............x.............:.....:x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 84243115 NA +3299 chr4 + 190214555 155421452 155421451 155421527 76 AAGAAAGCTATAAACAGCAAAAATTTTGCTGTAAGTTTCCCTGTGTCTTCTCTCCCTCTCTCCCTTCCCCCTCCCC chr4 + 94230402 26884295 26884294 26884370 26884295 26884294 26884370 76 AGAAAAGCAGTAAATAGAATAAGTTTCACAGTCTGTGTTTTTGCTTTTGCTCTCTCTCTCTCCTTCCCCCCCCCCC .::.....x:....:..x.x..:...::.x..xx..x.:::..:x.:.x.....:........:.:.....:.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 128537157 61677398 +3019 chr4 + 190214555 155470749 155470748 155470869 121 CAGAGACTCTGTTCTTGGGAACCTGGGAAGCCTGCAACCCAGGCTCTCCAAATATTGGGCTTCAAGAAACACAGGACCTCTTGAAATTATAGTCAAAATATGTGTGTGTGAATGTGCATTT chr4 + 94230402 73916992 73916991 73917112 73916992 73916991 73917112 121 CAGAGAGTGTTTTCTAAAGAAATTAGGACAACTGAAACAGAATCTCTCAAAACATCAGATCCTAAAAAAAACAAACTTGCTTAATCTTGTAGTTAAAATTTTGTCATTCCAAGATGCATTT ......x.x.x....x::...x:.:...x:x...x...xx.:x.....x...:..::.:::::..:...x...::x::x...:.xx..:....:.....x.xxx::.x:x..x:....... 121M 71/121 58.7% 121/94230402 0.0% 0/121 0.0% 81553757 NA +9219 chr4 + 190214555 155473496 155473495 155474163 668 AAACCACTCACTTCTATCAAAATAGTCTGAGGAAACAGGTGTAGAATAG---ATTATATTCCATTTAAAACATTGCTTGCTTTATTGTTTTTAAATAGGCTTATGTGAAACTCCACCCGCTGGGAAAAAATGAAATCAGGATGAATCATACATCC-AAAGGTCATTGATCTAAAAATATAGGTCTTGTAAAATGAATAAACATATTCTATTTTGTGAAAGCATCAAGTGAGAGGAT----TTTAGGATCCTTCCAAATCATTGAAGTCTCCCAGGTTGTTAATTAATTTATCAGTAACAGAG---GAGGC----AGCCACTCTAGTGCCCTGTCCTCCTGGGGAAGCAGAGT-----AGATAAAAGGTGATCCTGCTGAGGAAGGATAGAGATCAAGGGCCTTAACCTCTCCCCAGGAGAGAGAGAGAAGCATATGTGCA------------------AAACAGACAGGAAAGCTC-----AGCCCTCTCTTGAT---TGCTTCCATTG--AAAGCAGACTTA-GTAGGTCCTCAGGAAATACTGCCTATGATGATGAGAAGCATGCAACACTTC--------CGGGCCAGAACACAAAATTGACCAATGAAAACAGAACTAGTATTTGTTGTCATCCAAACATTAAACA-AAATTCTGAAAAGAAATGAAAAACAGACATTTCT---CATGTAGAGCCTTC----CACAGTTTTTATGGAGAGGGAGAATGA chr4 + 94230402 21726342 21726341 21727041 21726342 21726341 21727041 700 AATCTATTTATTTCCAATAAAAAAATCCAAGAGCACACGTGGGTAACGGCTGGTTACACTGCA---AAAGTATCA---GTTTCATTGCATTTATATCAGCTTAAATGAAAGTGTACCAGCTGG-AAAAAATTAAATCAGCATGAATCATACATCCAAAAGGTCACTGATCTAAAAATATGTATCCCAAGAAAAAGAGAAAAACGATGTAT------AAAAACCAAAATGATAAAATAAAAATTTAAATCCTTCTAAGCATTCTAAA---CTGAAGACATTAATTAATCTGAAAGTAATGTAGAAAGAGGCAAAAAGCTACCGTGATGTCATTTTCATTACATGGAACAGAGCTAAGGAGATAAAAGAAGATCATGCAGAGCCCAGGAGAAGATTAAGCTTCTTTATCTCTCT----GTGGGAGGGGAGAGCATATATGCAGGTAGTATTCTGTATGTGGAGAAGACGAAAGAACTCCAAATGACTGGATTTTAATGTGCACTTCTGTCACTCAAGCACACTGACGTA---TAACAGAAGACA-TGCATATG--GGTGCTAAGGATGATAAAGTCCCCTGTTGTCAGCCTAAATCACAAAGGTAACAAGTAAAACTAG-----GTTCCTCTTCTTAAAAAAATTCTAAATATAAGTTTTGAAAGGAAAT-AAAAACAAACTCTGCTGGATATGTTGTACCTTCTTGTCACGG-CCTGATGCAAAACAAGAATGA ..x.:.:.:.:...:.x:....x.:..::..::x...x...x:x..::.---:...:.:.x..---...::..::---.:..:....:x....x..x:.....x:.....x.x:...x.....-.......x.......x...............-........:..............:x:..:::x:...x::.x...x.::x.x...------...:xx:x..:...x.::..----x..x::.......:..::xx.:x..:---.:x.:.x::.........:.:xx.....::x..---.....----...:..:x.::..:.x.x.:.x::xx:x.:.:.....:-----.........:x....x...x...xxx:.:x::....:...xx:...x.:.....:----.x.:...:.:::.......:....------------------:.:x....:::.:.:...-----::.:xxx.:..:..---::....::.::--x.....x...x.-...---:xx...:.:.:.-...x....--.:..xx...x...xx.x.x.:.--------.:.x.:.:.x......:x.:..x.:.:...x:..-----..x::.x..x.:.xxx...:x:....:.-..:..:.....:.....-.......:..x:.x..---:....x.x:.....----...:.-::.x...x.:.:x:....... 49M3I11M3D9M3D45M1D31M1I54M6D20M4I26M3D33M3I5M4I38M5I55M4D24M18I18M5I14M3I11M2I12M1I3M3D12M1D8M2D22M8I34M5D28M1I17M1D16M3I14M4I5M1D21M 407/635 64.1% 700/94230402 0.0% 98/635 15.4% 133747154 56467401 +3298 chr4 + 190214555 155500133 155500132 155500208 76 CTTTTTTCTTTTCTTTTTTTTCTTTCCTTCCTTTTCCTTTCCTTCTTTTCT-TTCTTTTTTTTTTTTTTTTTTTTGG chr4 + 94230402 28615945 28615944 28616021 28615945 28615944 28616021 77 CTTCTTTCTCTTCTTTTTCTCCTTTGCTTCACTTGTCATTCTGTGTTTTCTACTCTCTCCCTTTTTCCTTTTGCTGG ...:.....:........:.:....x....x:..x:.x...:x.x......-:...:.:::.....::....x:... 51M1I25M 54/76 71.1% 77/94230402 0.0% 1/76 1.3% 126884188 63330367 +3594 chr4 + 190214555 155500473 155500472 155500601 129 TGTACATGTACATATTTGTAACATATACAAATAAA---------------AAAGATGACAATAAT--AGCGTGCAGAATTGTAAA--TGCAGAGACACTGGTTCAAT--GTTCTTACTTTTTTTTTTTTTTCTTTTTTTTTTGGTGGAGT chr4 + 94230402 26784402 26784401 26784550 26784402 26784401 26784550 149 TGAACATAGATCTATTTGTAAAGCA-ACAATTAAATGGGAATTTCCCAGAAAAAAAAACAATATTTAGATATCCAGAATTATAAAAGTGTGTAAGAGTTGGAGGAATTAGTTTTTACCTTTTTTTTTCTTTCTTTTTTTTTTGGCAAAGT ..x....:x.:x.........x::.-....x....---------------...:.x:......x.--::::.x.......:....--..::x.::x::...xxx...--...:....:.........:................:::... 25M1D9M15I15M2I18M2I20M2I41M 92/128 71.9% 149/94230402 0.0% 22/128 17.2% 128716071 61498484 +3624 chr4 + 190214555 155510607 155510606 155510724 118 TGAAGACTCAGTCTAGGACCCAGTTGTATTCCACCCAATTTTTATTAGTTGCTTGGTTTGCTGTTATTGTTGTTTGTTTGTTTGCTTTTGTTTCTTAGTGACATGA-AGAAAATTAATT chr4 + 94230402 6207681 6207680 6207799 6207681 6207680 6207799 119 TGAAAATTCAACTTGAGTTATAGTCCTGCTTTGCCCACATTTCAGTCTTGTGTTGGCTTGTTGTTATTGTTGTTTTTCTGTTTTTTTTTTTTTTTCTGTAGAGTACTAGGAAATTAATT ....:.:...:::.::.x:x:...:x.::.:::....xx...:.x.xx.xxx....:...:..............x.:.....x:....x...:.:x..::x:.:x-..:......... 106M1I12M 74/118 62.7% 119/94230402 0.0% 1/118 0.8% 149302926 40911629 +3136 chr4 + 190214555 155510661 155510660 155510702 42 GGTTTGCTGTTATTGTTGTTTGTTTGTTTGCTTTTGTTTCTT chr4 + 94230402 25538666 25538665 25538707 25538666 25538665 25538707 42 GGTTTTTTGTTGTTGTTGTTTGTTTGTTTGCTTTTGTCTATT .....x:....:.........................:.x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 129971995 60242560 +3454 chr4 + 190214555 155538656 155538655 155538873 218 ATAAAATATATATACTATATATACTATATATAAAATATATATACT------------ATATATACTATATATAAAATATATATACTATATATACTATATATAAAATATATATACTATATATAATATAGTATATACATTATTATATTATTATTTATTA--------------TATTATATATACTCTATAATTATATATACTAAATATATATACTATATATAAAATATATAGTATATATTATAAT chr4 + 94230402 26320199 26320198 26320430 26320199 26320198 26320430 232 ATAAAATATTT-TCTTATATGTATTC------AAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTA----TATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTAGTATGAAAAATTAAGTGTG-ATTTTATTCCTAAAATGTAAAAGAGACAATACAGT .........x.-.x:.....:..:.x------....:.xx...:.------------..x...x::.:..:..x.xxx..:...:...............:..x....x...xx.:...x.....xx:...x.x:.x....:..----...x..x..--------------:....:.x..x..:.x..:.xxx.x.x.:...:.:.:-..x:...x:x......:..x.:x.x.:.x..:.:. 11M1D14M6D13M12I87M4D9M14I37M1D35M 137/206 66.5% 232/94230402 0.0% 38/206 18.4% 129218457 60996098 +3048 chr4 + 190214555 155543967 155543966 155544055 89 AGCAAGACTTTGTCTCAAAAAAAAAAAAAGAAGAAGAAAAGAAAAAGAAAAAACGAATTTATTGCTCAAAATTCTGGAGGCTGGGAAGT chr4 + 94230402 52237760 52237759 52237848 52237760 52237759 52237848 89 AACAGAAAGTTATGTCAAAAAAAAAAAAAGAAAAAGGAAAGAATAAAGGCTAACTAAGTTGAAACGTATGATGGTGGGGAATGGGCAGT .:..::.xx..:.x..................:...:......x..:::xx...x..x..:xx:.x:.x:..xx...:.:x....x... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 103306207 86908348 +3355 chr4 + 190214555 155569901 155569900 155569975 75 AGACTG-AAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGA chr4 + 94230402 51728615 51728614 51728690 51728615 51728614 51728690 76 AGACTGTGAGAGAAAAATTAAAAAGAAAAGGGAAAAAAAAAGGGGGTGGGGAGGCAGGGAAAAGGACAAAAAGTGA ......-:.:.:.....xx..:..:.....::...:.........:x...:...x.:..:..:...x:::...x.. 6M1I69M 53/75 70.7% 76/94230402 0.0% 1/75 1.3% 103841286 86373269 +3184 chr4 + 190214555 155601585 155601584 155601663 79 ATGGCTGAG---TAGTATTCCAT-----AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATAT chr4 + 94230402 13734878 13734877 13734964 13734878 13734877 13734964 87 ATGGTTGAGGCACAGAACTCCATTGCTTGGGGTGGGCGTGTGTGTCTGTACTGCTGGGTGTGTGTGCATATCTGTTTGTGTATATAT ....:....---:..x.:.....-----:.x...x.:........x...::xxx..x.........::...x...x........... 9M3I11M5I59M 60/79 75.9% 87/94230402 0.0% 8/79 10.1% 141866707 48347848 +3136 chr4 + 190214555 155601609 155601608 155601678 70 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATACCACAATTGATTTA chr4 + 94230402 60813649 60813648 60813718 60813649 60813648 60813718 70 TGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGTAAACATGCAAGAATTCATCTA .....x.xx......x:x.........:.........x..x.x:..:...x.:..:.x.x....x..:.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 94787960 NA +3279 chr4 + 190214555 155606399 155606398 155606467 69 TTTTGGATATATGTATGTA---TACGTGTATACACACACATAAATACAAACACATAGATACACACAGAAAGA chr4 + 94230402 30549428 30549427 30549499 30549428 30549427 30549499 72 TTCAGGAAATCTGTGTGAAAATTACCTGTAAACACACATAAGCATACAAACACACAGGTACACACAGAGGGA ..:x...x..x...:..x.---...x....x.......:.x:x...........:..:..........::.. 19M3I50M 53/69 76.8% 72/94230402 0.0% 3/69 4.3% 125056971 65157584 +3456 chr4 + 190214555 155611929 155611928 155612006 78 GTGGTGGGACCTGTAGTCCCAGCTACTTGGGAAGCTGAGTGGAGAGAATCAGTTGAGTCCAGGAGTTTGAAGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC-ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x-..x......:...........::.:......:xxx.x...x..x....::....:..:..x::....:.. 7M1D70M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 79578728 NA +3927 chr4 + 190214555 155624284 155624283 155624457 174 TGATAATGGAAAGGAAAGGAAAAGAAGAAA-------------GAAAAAGAAAGAGAAAGAAGAGAGAAAAAGAAAGAAAGAAGAGAGAAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGGAGAAAAGAAGATAAAGAAAAATAAAACTACCATTTGGGTACTATCACCACTACCTGG chr4 + 94230402 84536564 84536563 84536749 84536564 84536563 84536749 186 TGTCAAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAATTAAAATTTACA-ACTAGCCATACTATCTAG ..x:..x.......:..:.....:..x..x-------------...:..:....:.....::::::...:...xx.x:x..x.:.:xx.:x.:xx:...x.xxx..........x.:.x....:.:.xx.:..::.::....x.....::xx....:..xx....:x:-....x.xx:....:..:. 30M13I125M1D18M 106/173 61.3% 186/94230402 0.0% 14/173 8.1% 71087720 NA +3122 chr4 + 190214555 155624295 155624294 155624382 88 AGGAAAGGAAAAGAAGAAAGAAAAAGAAAGAGAAAGAAGAGAGAAAAAGAAAGAA--AGAAGAGAGAAAAAGAAAAGAAAGAAAGAGAAA chr4 + 94230402 43128061 43128060 43128149 43128061 43128060 43128149 89 AGGAAAGGAGAAGAGGAAATAAGAATCAATAAAGAGAGCAG-GAAAAAGAAATAACTAGAATGGGTAGATGGAAGAGAAGATAAAGAAAA .........:....:....x..:..xx..x.:.:...:x..-..........x..--....x:.:x.:.x:...:....::x..:::... 41M1D13M2I33M 61/87 70.1% 89/94230402 0.0% 3/87 3.4% 112496234 77718321 +4183 chr4 + 190214555 155624297 155624296 155624429 133 GAAAGGAAAAGAAGAAAGAAAAAGAAAGAGAAAGAAG---AGAGAAAAAGAAAGAAAGAAGAGAGAAAAAGAAAAGAAAGAAAGAGAAAGAAAGAA--AGAAAGAAAGGA--GAAAAGAAGATAAAGAAAAATAAAACTA chr4 + 94230402 43128019 43128018 43128158 43128019 43128018 43128158 140 GATGGGCAAAGAAAACAGATATGAATAGATAAAAAGGTATGGAGGAAAGGAGAAGAGGAAATAAGAATCAATAAAGAGAGCAGGAAAAAGAAATAACTAGAATGGGTAGATGGAAGAGAAGATAAAGAAAATTGataata ..x:..x......:.x...x.x::.x...x...:.:.---:...:...:..:.::.:...:x:....xx.:x.....:..x.:..:.......x..--....x.::x:..--...:...............x.:.x.x.. 37M3I56M2I12M2I28M 91/133 68.4% 140/94230402 0.0% 7/133 5.3% 112496278 77718277 +3129 chr4 + 190214555 155624309 155624308 155624376 68 AGAAAGAAAAAGAAAGAGAAAGAAGAGAGAAAAAGAAAGAAAGA--------AGAGAGAAAAAGAAAAGAAAGAAA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x.........::.:........:.::.::......x.x...:--------.x........x.:...:...:... 44M8I24M 51/68 75.0% 76/94230402 0.0% 8/68 11.8% 117545531 72669024 +3026 chr4 + 190214555 155635047 155635046 155635099 53 ACTCCGTCTCAAAAAAAAAAAAAAAAAAACCACACACACACACACACACACAC chr4 + 94230402 26446820 26446819 26446872 26446820 26446819 26446872 53 ACCTCACCACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACAC ..::.::.x..........xx......xx.x...x.................. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 129188227 61026328 +3073 chr4 + 190214555 155635056 155635055 155635101 46 CAAAAAAAAAAAAAAAAAAACCACACACACACACACACACACACAC chr4 + 94230402 26446827 26446826 26446872 26446827 26446826 26446872 46 CACAAAAAAAAACCAAAAAACCCAACAAACACACACACACACACAC ..x.........xx........xx...x.................. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 129188229 61026326 +3106 chr4 + 190214555 155637076 155637075 155637135 60 CCTTGCAGAGTATTGGTGTTTTTTTGTTGTGGTTGTTTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 90812750 90812749 90812805 90812750 90812749 90812805 56 CCTTGCTAAG----AGTGTTTTTTTGTTGTTGTTGTTTTTGTTTGTGTGTGTGTGTTTCT ......x:..----:...............x...............x...x...x.x.:. 10M4D46M 47/56 83.9% 56/94230402 0.0% 4/56 7.1% 64824326 NA +3242 chr4 + 190214555 155637086 155637085 155637131 46 TATTGGTGTTTTTTTGTTGTGGTTGTTTTTGTTTGTTTGTTTGTTT chr4 + 94230402 14999522 14999521 14999567 14999522 14999521 14999567 46 TATGTGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTT ...xx.x.............x......x.................. 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 140637564 49576991 +3163 chr4 + 190214555 155637091 155637090 155637137 47 GTGTTTTTTTGTTGTGGTTGTTTTTGTTTGTTTGTTTGTTTGTTTGA chr4 + 94230402 5779183 5779182 5779229 5779183 5779182 5779229 47 GTATTTGCTTGTAGTGGTTTTTTTTGTTTGTTTGTTTGTTTTTTTAA ..:...x:....x......x.....................x...:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 149857908 40356647 +3001 chr4 + 190214555 155639557 155639556 155639604 48 GAGCAAGACTGCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382714 88382713 88382761 88382714 88382713 88382761 48 GAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA .........x..x.........::.:..............:x.x.:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 67256843 NA +3070 chr4 + 190214555 155641924 155641923 155642040 117 CTGGGAGTGGGAGGCTGCAGTGGGCCGAGATCGTGCCACTGTACTCCAGCCTGGGCAACAGAGTGAGACTTTGACTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 70588042 70588041 70588158 70588042 70588041 70588158 117 CTAGCAGTCTGGGCCAGCGCTACACTGGAGGTGTATTTCTGTGCTCCAGAATCAGCATCAGTGTGAAGAAAAGGCTTTATAGGTTAAAAAAAAAAGAGAGAGAGAGAGAAGGAAAAA ..:.x...xx.:.x.x..:x.:x:.:.:::x:..:::x....:......xx.x:...x...x....::xxxx.:..:x.x.::xx............:...:...:....:....:. 117M 69/117 59.0% 117/94230402 0.0% 0/117 0.0% 85053882 NA +3676 chr4 + 190214555 155644936 155644935 155645053 118 TGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTAAACCCAGGAGGCAGAGACTGCAGTGAGCCGAGATCATGCCA--------------------CTGTACTCAGCCTGGTGAC-----AGAGCATG chr4 + 94230402 76033205 76033204 76033341 76033205 76033204 76033341 137 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCTTG .....x......:.:.......::::........x.xx.x...x.....:.......:..x:xx:.:...:..------:.x..x......--------------------...:x.:....x.......-----.....x.. 73M6D12M20I19M5I8M 83/112 74.1% 137/94230402 0.0% 31/112 27.7% 79611731 NA +3161 chr4 + 190214555 155647471 155647470 155647540 70 ACCTGTTATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCATTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x...x:.:.........::::........x.xx.x...x..:.............x:xx:..:..:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 79614263 NA +3186 chr4 + 190214555 155650123 155650122 155650196 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCCCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x:xx.x...x.x........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 79616919 NA +3213 chr4 + 190214555 155666635 155666634 155666679 45 TCCCCTCCAATTTTTTTCTTTCTCTCTCTCTCTCTCTTTTTTTTT chr4 + 94230402 63018306 63018305 63018350 63018306 63018305 63018350 45 TTCCCTCAACTTTTTTCATTTCTCTCTCTCTCTCTTTTTTTTTTT .:.....x.x......:x.................:......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 92648329 NA +3049 chr4 + 190214555 155666644 155666643 155666683 40 ATTTTTTTCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 + 94230402 6554015 6554014 6554054 6554015 6554014 6554054 40 ATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTT ....x..x:.:............................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 149112629 41101926 +3081 chr4 + 190214555 155666647 155666646 155666684 38 TTTTTCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTG chr4 + 94230402 6554020 6554019 6554057 6554020 6554019 6554057 38 TTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTG ..x....:...............:.............. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 149112627 41101928 +3198 chr4 + 190214555 155680400 155680399 155680493 94 TCTTAGTTCTAGTTATTTTGTATATCCACTGG------GAATTCCTACATGAACAATTTTAAGTATATGTGTGTGTGTGTGTGTGTGTGTGCACATGCAT chr4 + 94230402 15015615 15015614 15015714 15015615 15015614 15015714 100 TCTAAGAACTAGTTTGTTTGTTCATTTTCTTTTCTTCTGATTTTCTTAGTTATTAAATTTAAGCATGTATGTATATGTGTGGGTGTGTATGCATATGCAT ...x..xx......xx.....x:..::x..xx------..x..:..xx:.x.x:..x......:..:.:...:.:......x......:....:...... 32M6I62M 65/94 69.1% 100/94230402 0.0% 6/94 6.4% 140664785 49549770 +3118 chr4 + 190214555 155685591 155685590 155685643 53 TGTTCTCCTTGTGTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTGCTGTTCTTT chr4 + 94230402 7931674 7931673 7931726 7931674 7931673 7931726 53 TATTTTGTTTGTATTTTTTGTTTTTGTTTGTTTGTTTCTCCTTGCTGTTCCTT .:..:.x:....:......x.....x...x...x......:.........:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 147753917 42460638 +3134 chr4 + 190214555 155686350 155686349 155686466 117 GTGCGCCTGTTGTCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATGACTTGAACCCGGGAG---------GCAGAGGTTGCAGTGAGCCAGGAGTGTGCC-----ACTGCACTCCAGCCTG--GGCTACAGAG chr4 + 94230402 76033204 76033203 76033335 76033204 76033203 76033335 132 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAG ....:.x...x..:.........::::.......:x.xx.x...xx..........:.:..---------.:...:xx..xx.:x.:x...:x.......-----x....x.-.....x..--.:..:..... 61M9I30M5I7M1D8M2I10M 82/116 70.7% 132/94230402 0.0% 17/116 14.7% 79653146 NA +3126 chr4 + 190214555 155692931 155692930 155692988 58 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAGCCCAGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x....:.:...........::........x.xx:x...x::.....:.....:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 79659724 NA +11768 chr4 + 190214555 155696657 155696656 155697140 484 AGAATGACATGACTATTGCTTTTGCTCACCTGTCTT-TTTCTGTTTTCATCCGTGCATAAAGTCACTCCTCTTTCTGTTCTGACTTTTTGCTGTCCATAGACATCCCAGTTACCAGTGTCCTTGAATTGATAGTGGCTTCTGTTT-----GTCAGTCT-CATATAAGAACTACAGCTCATCAGGAGGAG--------ATCGCAGCAGGGTAAGAGACACCAACACCATGTTCTGCACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTGTCCTTTCTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGAGGTGAGTGCGTGCTCTTTA chr4 + 94230402 21854984 21854983 21855463 21854984 21854983 21855463 480 AAAATAATACGTTTGTGGttttttctttctttttttctttcttgttttctAGGGGCAAACATT------TGTTCCTGAGATGATTTATAGCTACCAATAATCTTCCACCGTGGTTGCTTCATCAAAT--ATCCTGGCATCTTCTTCTCCTGTTAGTAAACAGAAGAGTACTATAAATTACCAAGCCAAGTACTCTTACCCTCAATAG----AGAGACAGTA-CAGCATGTTCTGTACAAAACTGAAAGACTTGAAGATCACGGGGGAATGTCCTTTCTCCTTACTGACTCAAAGTCGAATTGCTGATGAACATGAGAAGGACTGCACAGAAAAC------AGCTCTAGAGCAGCTTTGCCCATCTGCAAAGAAGTCCATGAAAAAGACACTCAAGGAAACCTGCCACAAAGGAAAACAAGCAGAAGTAGAGTGTACCTGCACACATTAACTGAAAGCATCTGCAAACTAATATTTCCGGAGGTAAATGGATACTGTGTA .:...:.:.:.x:.:.x.:....x..:x.:.x.:..-.....xx...:x.xx.x...x.x.x.------.x..:...xxx...:..x.x...::.x...:x.x...xxxx.:x:x.:x..x.::...--..xx....x...x:..-----..:...xx-..x.x:..x....:.:x.:.:..:.xx:..--------x:.x..::..----.......x:.-..x.........:..:..:..x..:..::.x........:..:..:..................:.x.x.:...:.:..x..:.:..::x.xx::....xxxx:...:..:.------....x:.:....:.:x..........:x....x:.:.x...:..::...:x....:..::..x..x.....:.....x..:x.:..:x....x..:..x.....x..::.x..:..:..:........:..x..:..:.....:.:..x:.:..x.x.. 36M1I26M6D58M2D16M5I8M1I30M8I10M4D10M1D112M6D159M 300/465 64.5% 480/94230402 0.0% 34/465 7.3% 133841673 56372882 +3879 chr4 + 190214555 155701664 155701663 155701746 83 CATGGTGGCTCATACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGGATCACTGGAGCTCAGGAGTTCTTGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:x..--.x......:...........::........x.xx.x.:.x....x..:.:...:..:.:.x........ 12M2D69M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 79668467 NA +4984 chr4 + 190214555 155703929 155703928 155703999 71 CAGTTTGAACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAAGCACAAAATAAAAGAAAGCAGGTAAGT chr4 + 94230402 21859834 21859833 21859904 21859834 21859833 21859904 71 CAGTTTGAAAGACTAAATCTTGCACTTCAGAGAACATTATCAAAGCACAGGATAAAAGAAACCAGGTATGT .........x.:..:...x...................:x.........::..........x......x.. 71M 61/71 85.9% 71/94230402 0.0% 0/71 0.0% 133844095 56370460 +38989 chr4 + 190214555 155710530 155710529 155711256 727 ATGTGATTTCA----GGAGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGAAGAGGTTTTTAAAATATGTTACGAGGAAGATGAAAACATCCTTGGGGTGGTTGGAGGCACCCTTAAAGATTTTTTAAACAGCTTCAGTACCCTTCTGAAACAGAGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATAAGGAGGATGATTTTCTACATGTTTACTACTTCTTCCCTAAGAGAACCACCTCCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTCACGTATTATATGAAACGGAAGTGGAAGTGTCGTTAATGCCTCCCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCAAGACATTTCCATTCCATTTCATGTTTGACAAAGATATGACAATTCTGCAATTTGGCAATGGCATCAGAAGGCTGATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTTGAAGAATACTTTGAAATTCTGACTCCAAAAATCAACCAGACGTTTAGCGGGATCATGACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGTGAAAAAATCTTCAAGGGTAAG chr4 + 94230402 21862291 21862290 21863021 21862291 21862290 21863021 731 ATGTGGTTCCACGCAGGTGTTCCTGTGGAGTCTCTACGAGAATCTCTTGGTGAAGAGCTATTCAAAATATGCTATGAAGAGGATGAACACATACTGGGGGTTATTGGAGGAACCCTTAAGGACTTCTTGAACAGTTTCACTACTCTGCTGAAGCAAAGTAGCCACAGTCAGGAAGCAGGAAAAAAGGACAGACTTGAAGAAGTTTCTATATTATGCCTGGAGAAAGATCAGGACTTCTTAAATGTGTATTATTTCTTTCCCAAGAAAATCACAAGTCTTATTCTATCTGGTATTATTAAAGCAGCAGCTCATGTTTTGTATGAAGCTGAGGTGGAAGTCACGCTCATGCCTCCTTGTTTCCATAATGACTGCACTGAGTTTGTTAATCAGCCTTATTTGCTGTACTCTATACAAGTCAAAAGTGCAAAACCTTCTTTATCTCCATGTAAACCGCAGTCTTCACTTGTGATTCCTGCCTCTGTGTTCTGTAAGATTTTCCCGTTTCATTTTATGTTTGACAAGGATATGTCTGTTCTACAAGTTGGAAATGGGATAAGAAGACTTTTGACCAGAAGAGAATTTCAAGCTAAGCCTAATTTTGAAGAATATTTTGAAATTCTTACTCCTAAAATAAGCTGCACATTTAGTGGAATAATGACAATGTTAAATATGCAGTTTACAGTACGAGTAAGAAGATGGGATAATACTGATCTGAAATCATCTATGGTAAG .....:..:..----..x.....x......x:.x.xx:...................x.x..:........:..:..:..:......x....x..x.....x:.......x........:..:..:..:.....:....x...:..x.....:..:..:.....:x.:..:.............:..:...:.....:..x.::..:..x:..........x..:..xx.x..:..::..x....x..:..:.....:..:....:..:...xxx:..x.....x:.:..:..:..x..:.....x.....:..x..:......:.x..:........xx..:.x........:..:...........:....x:........x........:..:...:.......::.x..x:.x.....::.x..:..x..::.:..:..xx.:.....x.....:..:..x........::.x..xx.:.....:....:x..:..:..:.....:...........:......x.x:....:...x....x.....x..x.....:..xx...x...:.....x.......xx....................:...........x.....x.....x.:.::x..:.....:..:..x.....x.....:............::x........:..:........:..:x...xxxx:.....x..x.x...... 11M4I716M 549/727 75.5% 731/94230402 0.0% 4/727 0.6% 133848239 56366316 +33829 chr4 + 190214555 155713096 155713095 155713586 491 AGGTTATGGACCTCAAAGGCCAAATGATCTACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGATTAGAAGATTTTACAGGACGAGGGCTCTACCTCTCAGACATCCCAATTCACAATGCACTGAGGGATGTGGTCTTAATAGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAGAGGCTGGGGAAGCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAGAAGAAAAAGACAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGTCACCATGCTCTTCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTCTACAAGGTA chr4 + 94230402 21864259 21864258 21864749 21864259 21864258 21864749 491 AGGTAATGGATCTTAAAGGCCAAATGATCTATATTCTTGAATCCAGTGCAATCCTATTCTTGGGATCTCCATGTGTGGATAGGCTAGAAGATTTTACAGGACGTGGATTATACCTTTCAGATATTCCTATTCACAATGCACTGAGAGATGTTGTTCTGATTGGAGAGCAAGCCAGAGCTCAGGATGGACTGAAGAAGAGGTTAGGAAAGCTGAAAGCAACCCTTGAACAGGCCCATCAGGCACTTGAAGAGGAAAAGAAGAAGACTGTAGATCTTCTGTTTTCTATTTTTCCTGGAGAAGTTGCTCAGCAGCTGTGGCAGGGACAAGTAGTGCAAGCCAAGAAGTTTAATAATGTCACAATGCTTTTCTCTGACATTGTTGGATTCACTGCCATCTGTTCCCAGTGCTCACCTATGCAGGTTATAACCATGCTTAATGAGCTTTATACTCGCTTTGATTACCAGTGTGGAGAGTTAGATGTCTACAAGGTA ....x.....:..:.................:...x.................:.:..:.....:..x..x........:..::...................x..::.x.....:.....:..:..x.................:.....x..::.:..x..:..:......x.......:.....x............:.:..:........:..x........:..:.....:..:..x..x..:.....:.....:.....x.....:.......x:..:..x.....:x.x..:....................:..:.....x.................:.:.........x.....:.....x.....:.....:..............:..............xx.......:..x........:....x:..x..:........:..::.x............:.:............... 491M 408/491 83.1% 491/94230402 0.0% 0/491 0.0% 133848837 56365718 +3820 chr4 + 190214555 155713371 155713370 155713492 122 CTGTGCTCCATATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGTCACCATGCTCTTCTCAGACATCGTTGGGTTCACTGCCATCTG chr4 + 94230402 21908372 21908371 21908493 21908372 21908371 21908493 122 CTGTACTCCGTTCTACCACCATCGGTGGCAAATGAGCTGAGACACAAGCGTCCTGTTCCAGCTAAGCGATACGACAATGTCACCATTCTCTTTAGTGGCATTGTTGGGTTCAATGCCTTCTG ....:....:.x:.x..x:xxxx...x..xx.xx.....x.:..x::..:xx:...x.x...:...x::.x.:::...........x.....:xxx.:...:..........x....x.... 122M 78/122 63.9% 122/94230402 0.0% 0/122 0.0% 133804999 56409556 +11073 chr4 + 190214555 155717132 155717131 155717304 173 ATAGTATGGAA--AATATATTATGTCTAGGTGGAGACCATTGGCGATGCCTATTGTGTAGCTGGGGGATTACACAAAGAGAGTGATACTCATGCTGTTCAGATAGCGCTGATGGCCCTGAAGATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGGT chr4 + 94230402 21865235 21865234 21865409 21865235 21865234 21865409 175 ATATTAAGGAACAAATGTACCTGTTTTAGGTTGAGACTATTGGAGATGCCTACTGTGTCGCTGGAGGTTTACACAAAGAAAGTGAAACCCATGCTGTCCAAATAGCATTGATGGCCCTGAAGATGATGGAGCTGTCAGATGAGGTGGTGTCTCCCCATGGGGAGCCTATCAAGGT ...x..x....--...:..::xxx.:.....x.....:.....x........:.....x.....:..x...........:.....x..:........:..:.....::.........................x..x.....:..x:.............:..:........... 11M2I162M 143/173 82.7% 175/94230402 0.0% 2/173 1.2% 133851897 56362658 +12594 chr4 + 190214555 155722014 155722013 155722195 182 CATCATGTTATTTTTTGCTTTC-------AGATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAAAATGCCCCGTTACTGTCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTCAGCCCAACAACTTACAGGTA chr4 + 94230402 21867271 21867270 21867459 21867271 21867270 21867459 189 CATTATGATATTTTCTGCCTTTTATTTGAAGATGCGTATTGGCCTTCATTCTGGATCTGTTTTTGCTGGAGTTGTTGGAGTTAAAATGCCTCGTTATTGTCTCTTTGGAAATAATGTAACCCTTGCCAACAAGTTTGAATCTTGCAGTGTACCTCGAAAAATAAATGTCAGCCCAACAACTTACAGGTA ...:...x......:...:..:-------.......x.....x..x..:........x...........x..:.................:.....:.....:........:.....x..:..x..:.....:.....:..:...........x........x.......................... 22M7I160M 157/182 86.3% 189/94230402 0.0% 7/182 3.8% 133854743 56359812 +15244 chr4 + 190214555 155730010 155730009 155730922 913 TTATATTTTAATATTTTCAGATTACTCAAAGACTGTCCTGGTTTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAACTCAAAACCATGCTTCCAAAAGAAAGATGTGGAAGATGGCAATGCCAATTTTTTAGGCAAAGCATCAGGAATAGATTAG--CAACCTATATACCT-----------------ATTTATAAGTCTTTGGGGTTT--------------GACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTG-TTTAACATGACAAAATGTATGTACTCACTTCAGT---------ACTTCAGCTCTTCAAGAAAAAAAAAAAAAACCTTAAAAAGCTACTT-----TTGTGGGAGTATTTCTATTATATA-ACCAGCACT-----TACTACCTGTACTCAAAATTCAGCA--CCTTGTACATATATCAGAT----AATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTGGTGGAATGCCATGGTTATTAAAGTGTGTTTGTGATAGTGTCGTCAAAAAAAAGGTTTTTGAATAGAAATTACATTCTTTGACACCCTCAGTTCTTTCAAA------CTTTCAACTCTG-----------------CATTTTATTGCATTTTCTCATTTAACTG------------TTAGTATATGTTTGAATATAGGCTGACTTTTTTTCTCTATTGCAC----------------TTTCTTCT---------------TTTTTTCTTTTTAGAAAATAAGCAATTAGGGGTTAGATGCAATATGAATATAAAATAG------TTCTGTAAATACCAAATATTATTTTTAGTTCTGGAAGTT----------------AAAAATACTCTC--CATAGTAACGTGTGTTATAATAATAAATATTTCTTTTGTTTG chr4 + 94230402 21870306 21870305 21871326 21870306 21870305 21871326 1021 TCATTTTTTGTTAT----AGATTATTAAAGGAATATCCAGATTTTGTGTTTACACCGCGCTCAAGAGAAGAACTTCCTCCAAATTTTCCCAGTGATATCCCTGGAATTTGCTATTTTCTGGATGCTTATATTCAAGGAACAAGCTCACAGACTTGGTTTCAAAAGAAAGATCTGGGAGATGGCAATGCCAATTTTTTGGGTGAGGAAACAGGAATAGACTAAATCATCTACTACATTCACGAGCATATCGAATAAATGTATAAATATTCTGttttttttgtataaattgaaaattttaaaaaatatttGAAAC--ATGAAAGCACTTTA--GATTGAGAACACCTGAAAGCTAGTATTAAAATTTCAGGAAGTATGTAACTGACTCCTTCATGTTTTTCCTTTGCATAAGGAATGTAGTCACTAAAATAATATTGCAACTTCACTGTTT------------AAAATGCCACTAAAAAGTACATGTTCCCTGTGGTAATTTGTGAGTGGTACATAACAACCCTCTCAGTTCTTTCTGCACTGAGAATTCTACATGTATTGTATATGCAGTGTGTCCGGAAATGTAA-----TGTGCAAG-TGATGCAGCCACATGCAGTGTTGTGAGCTGGTGCTTATCAGTGAACATTAAAAATTTATTTTATTAGTGATTCCATAAGAAAAATTATC---TTAAAAGTATCATCACTGCTACCATATAATCCTTCAAGAAGATCCTTTGGGCTCCATCCTTACAGCTGCTGACCATCTTCTAACACTTGCTGAAGTCAATGTGTTGAGTGTGCTCAGCATCTTCTGG---ATAGGGTTGTTAATTGTAGCTAATACACATATACATAGCAGAGTTTCCTGCTGACTGTTTCCTGAACTTTCTTCTGTGTATAAAATGAATA---------TAGATTCTGTATAATCACTGTATAATCAAGTTTCTGTAATCATCAAACAGTA-TTTTAGTTCTTGGGGTTTTTAAAATACTTCATAAAAAATAATATCAACTTGCTATTATGTATTAGAGCAATAAATGTTCTTCTTTGTTG .:..x....:x...----......:.x..:..x.:...x.:...:........x..x..x.....:..:........x.....:..:..:.....x.....:.....:...:................:xxx..........:....x.:x.x..x..:............x...:.....................:..::.:.x.x..........:..:--..x.:xx..:.:::-----------------..x.....:.x..:x.xx...--------------:.x.:x.x:..:..:.x.::.:.--x.............--.....x::.::x..:.x.:x:..................:x:.x..x..x:x..:::..x..-...xx.x.x:..x..x.x.....x.....xx.:.---------......x:x:..------------....x:..x:x....:x...x.-----:.....x.:.x.x.xx:.x:..:.-.x..:.x..-----.x..x:...:...x.:.....x:..--:x.....:..::.x::x:.----..x....:-----...:...:-.....x..:...x....:.x.::.:xx......xxxxx.x:..:x:......:xx.xx..x.:x.....x:x:..x..:...::..x.:---.x:...x..:xx..x:..x:...x.xx:x..:.....:------....x::...::-----------------...:..x.x:..:..x..x.xx.x.x..------------.:..:..x.x:.x.---.....x.x::.xx..x.xx...x.:...----------------..:..x..---------------...:....x.x..x.....:.::.---------.....x.x:...:.x:.:x:x...:------........x:.:....:.x..-..........x.::...----------------.......x.x..--.x.:x..x::...:...x.::.......:..::.:..xx... 14M4D204M2I14M17I21M14I23M2D14M2D62M1I34M9I12M12D22M5I24M1I9M5I25M2I19M4I8M5D8M1D89M3D38M6I12M17I28M12I14M3D28M16I8M15I24M9D25M6I21M1D17M16I12M2I42M 580/871 66.6% 1021/94230402 0.0% 192/871 22.0% 133859704 56354851 +6263 chr4 + 190214555 155759769 155759768 155759883 115 CTCTCCCTGTCCCCGCAGTACGGATTTGTGAATCACGCCCTGGAGTTGCTGGTGATCCGCAATTACGGCCCCGAGGTGTGGGAAGACATCAAGTAAGT-GGCCGGCTACCCTGGCT chr4 + 94230402 21876077 21876076 21876190 21876077 21876076 21876190 114 CTCGCCCTG--CCCACAGTACGGATTCGTCAATCACGCCCTGGAGCTGCTCGTCATCCGGAACTACGGGCCCGCAGTCTGGGAGGACATCAAGTAAGTCTGTCTGCTTGCCTGCCT ...x.....--...:...........:..x...............:....x..x.....x..:.....x....x:..x.....:..............-x.:.x...xx....x.. 9M2D87M1I17M 93/113 82.3% 114/94230402 0.0% 3/113 2.7% 133883692 56330863 +9661 chr4 + 190214555 155774951 155774950 155775151 201 TTGTTTTTGTTTTCCAGAAAAGAGGCACAGTTAGATGAAGAAGGACAGTTTCTTGTCAGAATAATATATGATGACTCCAAAACTTATGATTTGGTTGCTGCTGCAAGCAAAGTCCTCAGTAAGTTGAATGCAACTTTCCTTCTTTGGCCA--AGTTACACGTA-----GAAGCTCACAGAATGCATGGTTCAAGATCACAACGCAGGG chr4 + 94230402 21889798 21889797 21889999 21889798 21889797 21889999 202 TTTTGTTTCTTTTATAGGAAGGAGGCTCAGCTGGATGAAGAAGGACAGTTTCTTGTCAGAATAATATATGATGATTCCAAAACCTATGATCTGGTTGCAGCTGCAAGCAAGGTTCTTAGTAAGTAATATGGA---TGTCTTCTTTGACCACTCATTACATGTAAGATTGAAGAACACCGACAACAGGA---AAGTCCACATAGCAGAG ..x.x...x....x:..:..:.....x...:.:.........................................:........:......:.......x...........:..:..:.......x:x...x.---.x:........:...--x:.....:...-----....xx...x..xx:..x.:---...x:....xx....:. 132M3D15M2I11M5I20M3D17M 155/195 79.5% 202/94230402 0.0% 13/195 6.7% 133885153 56329402 +9712 chr4 + 190214555 155777521 155777520 155777647 127 TAGATCTCAATGCTGGAGAAATCCTCCAAATGTTTGGGAAGATGTTTTTCGTCTTTTGCCAAGAATCTGGTTATGATACAATCTTGCGTGTCCTGGGCTCTAATGTCAGAGAATTTCTACAGGTAAG chr4 + 94230402 21890824 21890823 21890950 21890824 21890823 21890950 127 TAGACCTGAATGCTGGGGAAATTCTTCAGATGTTTGGGAAGATGTTTTTTGTGTTCTGCCAAGAATCTGGCTATGATACAATTCTGCGTGTTCTGGGCTCAAATGTCAGAGAATTTTTGCAGGTAAG ....:..x........:.....:..:..:....................:..x..:..............:...........::.......:........x...............:.:........ 127M 111/127 87.4% 127/94230402 0.0% 0/127 0.0% 133886697 56327858 +15564 chr4 + 190214555 155789697 155789696 155789915 219 TTTCTTCTTTGCTGCAGAACCTTGATGCTCTGCACGACCACCTTGCTACCATCTACCCAGGAATGCGTGCACCTTCCTTTAGGTGCACTGATGCAGAAAAGGGCAAAGGACTCATTTTGCACTACTACTCAGAGAGAGAAGGACTTCAGGATATTGTCATTGGAATCATCAAAACAGTGGCACAACAAATCCATGGCACTGAAATAGACATGAAGGTAA chr4 + 94230402 21895670 21895669 21895884 21895670 21895669 21895884 215 TTTCTTCTTC----TAGAACCTGGATGCTCTGCATGACCACCTTGCTACTATTTACCCAGGTATGCGAGCCCCTTCCTTCAGATGCACTGATGCGGAGAAGGGGAAAGGACTCATTCTGCATTACTATTCAGAAAGGGAAGGTCTACAGGATATTGTCATTGGAATCATCAAAACAGTAGCTCAGCAGATCCATGGTACAGAAATAGATATGAAGGTAA .........:----:.......x...........:..............:..:........x.....x..x........:..:...........:..:.....x............:....:.....:.....:..:.....x..x................................:..x..:..:........:..x........:.......... 10M4D205M 187/215 87.0% 215/94230402 0.0% 4/215 1.9% 133894027 56320528 +17767 chr4 + 190214555 155793836 155793835 155794095 260 TTTCCCCCTTTGATATCCAGGTTATTCAGCAAAGAAATGAAGAATGTGATCATACTCAATTTTTAATTGAAGAAAAAGAGTCAAAAGAAGAGGATTTTTATGAAGATCTTGACAGATTTGAAGAAAATGGTACCCAGGAATCACGCATCAGCCCATATACATTCTGCAAAGCTTTTCCTTTTCATATAATATTTGACCGGGACCTAGTGGTCACTCAGTGTGGCAATGCTATATACAGAGTTCTCCCCCAGGTAAAATGA chr4 + 94230402 21904740 21904739 21904999 21904740 21904739 21904999 260 TTCCTTCGTTTTTTTTCTAGGTTATTCAACAGCGGAATGAGGAATGTGACCACATTCAATTTTTAATTGAAGAGAAAGAATCTAAAGAAGAGGACTACTATGAAGACCTTGACAGATTTGAAGAAAATGGTACCCAAGAGTCTCGCATCAGTCCATACACTTTCTGCAAGGCTTTTCCTTTCCACATAATATTTGACAGAGATCTGGTGGTCACACAGTGCGGCAATGCAATATACAGAGTCCTTCCACAGGTTAGATGA ..:.::.x...xx.x..:..........:..:x.:.....:........:..:.:..................:.....:..x...........:.x:........:.............................:..:..x........:.....:..x........:...........:..:............x.:..:..:........x.....:........x...........:..:..x.....x.:.... 260M 216/260 83.1% 260/94230402 0.0% 0/260 0.0% 133889096 56325459 +11911 chr4 + 190214555 155795316 155795315 155796513 1198 TCTTTGCTCTCTATCTATATTTTAGCTCCAGCCTGGGAATTGCAGCCTTCTGTCTGTCTTCTCGCTGGTTCGTCCTCATATTGATATTAGTTTCCATGGGATCCTTTCTCACATCAATACTGTTTTTGTATTGAGAAGCAAGGTAATCA--AGATATT--------ATTTCATTAAATGTGAGAAAGGTATGTCACAAATTAGAAGTATTCAGGGGGGAAAATTATCACATTCTCTGAGAAAGTATAGAGAGATAAAACCCAGA---CCTCAAAGGAAGATCTATTTAAAAGGCAATAACATTGATTTTT-----GGTTTGCCTGAGGAGCAG----------TGGAACTCTATCAACTGATTAAAATTAAC-----------AGAGGTAAATTTTAGAGACTGTCTTTCTGAGACGGCCTTGTTTCACATCAAAAAACCAA-CATCT-------TTTACTCCCTGTA--------CAGCTACAGT--GCCTTATTTTA----GAAATCAGAACTAAAAAGGATTTTTTTT----TTTGGAAC--TTCACTCAAAACCACTTATTTATTCTTTCTTAAATTGTCTATTGTTCTTAGTAGCGTTTTTGTGGGTGAATAAAAGTGATGA-------AATATTCACACAGTTGATAATTTAGATAGTGCTGGGATCTCACGGTTTCTG---------TTCTTGGGATAGATACAGCAAAAGTCATTTTCCTAGAGTACCCATTGAATCCTTTCTGTATTTGGAACTGACTGTTTGCAGCTGCTCTATGAATACAGGGTGG-GAGAATGGGGAGGCTTGGCTTATTCTTTGAGA------GTCTGGTAATGTATGTTGGAACCATACCGGAAAATCAGGGGGATAAAAAAGATTCACAAAAGCTTGAAATAATTATGTGAAGAGTAGCACAGTTACTGTCCTGAATTCAGACGGGACAGTCACTTTTCTGCAGTGTTGCAAGGCAGCCACTAGGCTTATTACAGGCAGAACTCTGACAGAAGGCCCTCTCCTGTTCTAATGA-TGCACTTATTCTGCTTTGTGGTTTGGTGGGAAATGAGATATGCGTGTCCTTGTTGCTGAATTCTTAGGTAGGGAGAAAGGCATTCATTAATGGTTGTATCTTGCCTTTT----CAAGGAAGGATTGTTGGATGTGGAGAAATTAGAATGTGAGGATGAACTGACTGGGACTGAGATCAGCTGCTTACGTCTCAAGGGTCAAATGATCTACTTACCTGAAGCAGATAGCATACTTTTTCTATGTTCACCAAGGTA chr4 + 94230402 21905767 21905766 21906872 21905767 21905766 21906872 1106 TTTGTGTTTGTTCTTTACATTTCAGCTGCAACCAGGAAATTGTAGTCTTTTGTCAGTGTTCTCCTTGGTCCGGCCTCATATTGATATTAGTTTCCATGGGATCCTCTCACATATCAATACAGTCTTTGTACTGAGGACCAAGGTAACTAGAAAATATTCACTTGGCATTTCTATAAGT---AGAAATATAGGCTATAAGT-AGAAATAT----AAGTAGAAAGTGTAAGGCT-TCGGAGAAAAAAGAAGTACGGAAAAAGCAGAAGTCTTCAAAGAACATTCT---TGCATAGTAGTAAGCTTGGTTCCTTATGAGTTTTGAGCCAAGAAAAAAATCACAGGTCTGAATTCAATGTGTTAAATTGGCTTAACTGCTAAACAGGAATGGTGAAGTACATATACTTCTATTCTGAGGC-------TTTCCTGGCAAGAGGCCAAACATATATGGCATTTTACTGAAGGAAAGGAAGGGCAGTTACACTTAGTTTTATTTCATTATGACAAGGGAGGCAAATATGAAATGTGTTACCATTTGGACCGATACATTCATACGCACTTCTATGTCCTTT-------TCTCTA----------------------GAGAGAGCAAGAGAGGGGAGGCAGGCAATATGAA-ACAGTGAATGCGGAATGTAGAGTTG------CACCTACTATGCCAAAGAACTTCCTGAGAGAAGT-CAGCAGTAAT-----TCTTAGGGATTCTATGAAGTTCAT---------AGAATAGACAATCC-------TTTTATCAAACTATTGTGAAGAAAACAAGAAGTTATGACCTTCCAATTAAGGAAAGATGCCATGATTTTTATCTCTGAGGCA-----GAAAATCAGTG-----------------------TTGAAAT--------------TAGGGCAGT----GTTTTGTGTTCAA--GTGATAATT-----------GGGTTTTAAGGTAAGGTGTAA--CTATTTCAGACATCAT-------GATGACCTTC-------ATAGTGAAGGCATTTACACAGAT---------GTTGTGAAGTAACACATG------------------TACCAATGCAATGATAAAA--------TAATTGTGATTTTTTTTTTTTTTCCACCAGGAGGGGCTGTTGGATGTAGAGAAGCTGGAGTGTGAAGATGAGTTGACTGGCACAGAAATCAGTTGCTTACGCCTGAAAGGGCAAATGATCTACTTGCCTGAAGCAGACAACATTCTCTTTCTTTGTTCACCAAGGTA .:.x..:.:x:.x.:..:....:....x..:..x..:.....:..:...:....x..x.....x:....:..x................................:..x..:........x..:......:....:.x........::.--.:.....--------.....xx...:.---.....x:..x.::.:..:.-....:...----::.x::...x.:.x.x::.-..x......:x.x.::x.x:x....xx....---.:......:.x:x...---.:x.x:.:.:...xx...:..::.-----.x....xx:x.:..:x.:----------:x...:..x..xx::.:.x.x::x.....-----------.:x...:..x.x:.x.x...x::x.......:.-------....x::x...:.::....-...x.-------......xxxx.x.--------...:....x.--.::......:.----..x.xx:..:x:...x.x..xx.x.x..----......x.--.x..:...x.xx.....x.x.:.:....-------.x....----------------------.:.x..::..:..x.:x..-------.....xx.-.....x:..:xxxx.x:...x.:..------...xxx:.x..---------...:..:..x.::.-.....:x.:.-----..:...:.xx:.:..x:.:.:.x.---------:...:x...x:.::-------:.:...x..xx:.xx...:-..:..:::.:..x:x..:.:.x::xx..:..:------.:.xx.xxx.x...x.:x..:x..-----.........x.-----------------------.......--------------...x:....----..::..x:....:--.x..:.:.:-----------.x...x:....:.:xxxx..:--:....x...:..xx.:-------..x.:..:..-------x..:...-x...:...:x.x.x.---------.x..x...:.:.x.:...------------------.x.:x.x.:.:x..x...:--------....x..x:.x.:..x::....----.x....:..::..........:.....::.:..:.....:.....::.......x..x..:.....:........:..x..:..x..............:...........:.:...x..:.....x.............. 149M2I7M8I12M3D19M1D8M4D19M1D31M3I16M3D24M5I18M10I29M11I33M7D19M1I5M7I13M8I10M2I11M4I28M4I8M2I28M7D6M22D19M7I8M1D25M6D11M9I14M1D10M5D24M9D14M7D19M1I32M6I24M5D11M23D7M14D9M4D13M2D9M11D21M2D16M7D10M7D7M1I15M9D18M18D19M8D22M4I141M 671/1011 66.4% 1106/94230402 0.0% 282/1011 27.9% 133889549 56325006 +14859 chr4 + 190214555 155799860 155799859 155800080 221 ATTTCTCCATATGACAGTGTCATGAACCTGGACGATTTGACAAGGAGAGGGCTGTATCTAAGTGACATCCCTCTGCATGATGCCACGCGCGATCTTGTTCTTTTGGGAGAACAATTTAGAGAGGAATACAAACTCACCCAAGAACTGGAAATCCTCACTGACAGGCTACAGCTCACGTTAAGAGCCCTGGAAGATGAAAAGAAAAAGACAGACACGTAAGA chr4 + 94230402 21907649 21907648 21907869 21907649 21907648 21907869 221 ATTTCTTCACACTGCAGTGTTATGAACTTGGATGATTTAACCAGAAGAGGGTTATATCTGAGTGATATTCCATTGCATGATGCTACCCGTGATCTGGTTCTTTTGGGAGAGCAGTTCAGAGAGGAATATAAACTGACTCAAGAGCTTGAGATCCTCACTGACAGACTGCAGCACACACTACGTGCACTCGAAGATGAAAAGAAAAAGACAGACACGTAAGA ......:..:.:x:......:......:....:.....:..x..:......:.:.....:.....:..:..x:..........:..x..:.....x..............:..:..:...........:.....x..:.....:..x..:..............:..:....x...::..x.x..x..x................................ 221M 181/221 81.9% 221/94230402 0.0% 0/221 0.0% 133892211 56322344 +15567 chr4 + 190214555 155802340 155802339 155802588 249 AGATTGCTGTATTCTGTCCTTCCTCCGTCTGTTGCCAATGAGCTGCGGCACAAGCGTCCAGTGCCTGCCAAAAGATATGACAATGTGACCATCCTCTTTAGTGGCATTGTGGGCTTCAATGCTTTCTGTAGCAAGCATGCATCTGGAGAAGGAGCCATGAAGATCGTCAACCTCCTCAACGACCTCTACACCAGATTTGACACACTGACTGATTCCCGGAAAAACCCATTTGTTTATAAGGCAAGTGTT chr4 + 94230402 21908366 21908365 21908614 21908366 21908365 21908614 249 AGATTACTGTACTCCGTTCTACCACCATCGGTGGCAAATGAGCTGAGACACAAGCGTCCTGTTCCAGCTAAGCGATACGACAATGTCACCATTCTCTTTAGTGGCATTGTTGGGTTCAATGCCTTCTGTAGTAAGCATGCCTCTGGAGAGGGAGCTATGAAGATTGTTAATCTTTTAAATGATCTTTACACAAGATTTGATATTCTAACTGATTCACGTAGGAATCCATTTGTTTACAAGGTAAGCATT .....:.....:..:..:..x..x..:..x..x..x.........x.:...........x..x..x..:..:x....:........x.....:.................x..x........:........:........x........:.....:........:..:..:..::.x..:..:..:.....x........:.:x..:........x..x.::..:...........:....:...::.. 249M 198/249 79.5% 249/94230402 0.0% 0/249 0.0% 133893974 56320581 +12170 chr4 + 190214555 155803607 155803606 155803775 169 AATATATGTACTGTTAGGTGGAGACTGTTGGTGACAAGTATATGACAGTGAGTGGTTTACCAGAGCCATGCATTCACCATGCACGATCCATCTGCCACCTGGCCTTGGACATGATGGAAATTGCTGGCCAGGTTCAAGTAGATGGTGAATCTGTTCAGGTTAGTAAATG chr4 + 94230402 21909925 21909924 21910093 21909925 21909924 21910093 169 AATATGTACCTTGCTAGGTGGAAACAGTTGGAGACAAGTATATGACTGTGAGTGGTCTACCAGAGCCTTGCATTCATCATGCACGATCTATCTGCCACCTGGCATTGGATATGATGGAGATAGCAGGCCAAGTTCAAGTAGATGGGGAGCCTGTACAGGTTAGTAAATG .....:.::x:..:........:..x.....x..............x.........:..........x........:...........:..............x.....:........:..x..x.....:..............x..::....x.............. 169M 145/169 85.8% 169/94230402 0.0% 0/169 0.0% 133893682 56320873 +21097 chr4 + 190214555 155804579 155804578 155805323 745 TTTCTTTTTTGCAGATAACAATAGGGATACACACTGGAGAGGTAGTTACAGGTGTCATAGGACAGCGGATGCCTCGATACTGTCTTTTTGGGAATACTGTCAACCTCACAAGCCGAACAGAAACCACAGGAGAAAAGGGAAAAATAAATGTGTCTGAATATACATACAGGTGAGAGAAAATGTCTTGGTATTTACTGAT-------TTGCAAAGAAAATGTGTCTTTGCATGTGGTTTAA---TTCTCTGAGAGATTTTGTTGCTTTAACAGAGTTATCACCTTCACTCTTCCCCACTGCTTGTAGAGTTGTTTACTTTTTATTTGAGAAGATTGTGTCATTATTTCCATTTTATATGATTTCACATCATCTTAGGAAATCCTGATATGATCATTGTTT----------CTAAAGCTTTGAGTTACCTTTCAGTACAACTTCAGCATTTGTTCTTGCCATCTTG----GTTTATAACATG-ATACATGTCACCTTCTCTATAAAACTTGTGTATACTTCTCTCTCTACTCCCCTTCCCTTGTCTTTTAGATGTCTTATGTCTCCAGAAAATTCAGATCCACAATTCCACTTGGAGCACAGAGGCCCAGTGTCCATGAAGGGCAAAAAAGAACCAATGCAAGTTTGGTTTCTATCCAGAAAAAATACAGGAACAGAGGTATGACTAATCAAAGTGTAATTTGCGTACTTAAGACAGAGTATAAGTATGGAAAACTAAAGCAAAATCACTGAAAATGTATTTCATTTGAAAA chr4 + 94230402 21911115 21911114 21911809 21911115 21911114 21911809 695 TTTTCTCTCTAAAGATAACAATAGGAATCCATACTGGTGAGGTAGTCACAGGTGTCATAGGCCAAAGGATGCCACGTTACTGCCTGTTTGGAAATACTGTCAATTTAACAAGCAGGACAGAAACTACTGGAGAAAAGGGAAAGATCAATGTGTCTGAGTATACGTACAGGTGAGTGA----TTCACTATTTTTACTGGTGTTGACACTTTAAAAGAAATCACTTTTCCAGTGTAAAATCAATGTGCTCTTGGAATTGATAGTGATGGGGCACTGTTAACACATTATCT------AAGTGCAT---GAGT-------------TCTGATGAAACTGTATGGT-------AGACTGTATTACAATGCATGATTGTTGG-TGTACAAATATGATCATGATCTAGAGATAGACTTAATGCTTCTATTAACTTGCTCACATA-------TGTGTGTGTTTAATATTTTAAATTGTGTATGGTTTGCATGCAT---------------ACACTTACATGT-TTTCTCTTTCTA---------------TTTTCAGGTGTCTTATGACACCAGAAAATTCAGATCCTCAGTTCCACCTGGAATACAGGGGTCCAGTTTCTATGAAGGGTAAAAAAGAACCAATGCAGGTTTGGTTTTTATCCCGAAAGAGTACAGAGACAGAGGTATGACTAACCAAAGTGTATTATTC---TTTTAAACAAGTTATAAATATGACAAATTTAATCTAAGCCACTGAGATCCATTTGCATTAGCAAA ...::.:.:.:x.............:..x..:.....x........:..............x..:x.......x..x.....:..x.....:...........::.x......x.:........:..x..............:..x...........:.....:..........x..----x..x:x:.x.......:.-------:.x:...::....xxx.:..:xx:...::xx.x.---.x....x:..:x.xx.:x..x.xx::..xx....x...x..xx..------x.x...x.---....-------------.:...x:.:.:...:.x:.-------.xx:.:...x.:xx::...x..:x.x..-x:.x.x:..........x:.:.----------:...x....:x.x.x..:.x::x::.:.-------::.x...x:..:x:..:..:----..x...:::x..-..:...---------------.x....:::.:.-:......:....---------------:...:..:.........x.x.................x..:......:....::....:..:.....x..:........:.................:.........:.....x....:.:.....::................:.........x.x.x.---:..x.:...::x.....:....:x...:.x..x.x..::......:.x:xxx..x....x.x... 177M4D18M7I34M3I45M6D8M3D4M13D19M7D28M1D22M10I28M7D20M4I12M1I6M15D12M1D12M15D160M3D65M 474/670 70.7% 695/94230402 0.0% 100/670 14.9% 133893464 56321091 +3604 chr4 + 190214555 155816761 155816760 155816843 83 CATGGTGGCTGGTGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGTAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x......:............:........x:xx.x...x...........:.:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 79783564 NA +3100 chr4 + 190214555 155820329 155820328 155820373 45 TCTCTCTCTTTCTCTCTCTCTCTTTCTCTTGTTTGTTGTTGTTGT chr4 + 94230402 153469 153468 153513 153469 153468 153513 45 TTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTTGTTGTTGT .:.x.....:...............:.:..xx............. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 155666860 34547695 +3026 chr4 + 190214555 155827703 155827702 155827760 58 CCTGGGCAAAAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 44082651 44082650 44082708 44082651 44082650 44082708 58 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAA ..x.x...:...:...:.x:......xx......x...x...x....x.......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 111745052 78469503 +3075 chr4 + 190214555 155827707 155827706 155827770 64 GGCAAAAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATACAG chr4 + 94230402 32375655 32375654 32375718 32375655 32375654 32375718 64 GGCAAAGTAGTGAAACTTTTTCAAAATAAAACGGAACAAAAAAGAAAAGAAAAAAAGCCCACAG ......:x.....:...:.x..xx..x....x::..x......:....:........xx:.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 123452052 66762503 +3141 chr4 + 190214555 155827727 155827726 155827786 60 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATACAGTGTGTAATACATATAA chr4 + 94230402 72824136 72824135 72824195 72824136 72824135 72824195 60 TTTCAAAAGAAGAAAAAAAGAAAAAGAAAAGCAAGAAAATACAGTGAATATTAAAGAAAA .:......:..:.......:.....:....:x..:.:.........x:..x..x.x.x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 83003591 NA +3569 chr4 + 190214555 155828201 155828200 155828292 92 GGTATCTTC--TAGCTGAGTTTATTAAG-------------GGGTGTCCAACCTTTTGGCTTCCCTGGGCATCACTGAAAGAAGAATTTTCTTGGGCCACACATAAA chr4 + 94230402 65178244 65178243 65178350 65178244 65178243 65178350 107 GGTTTCTTCAATAGCTGAGTACAGTAATCTTCACAGGGCATGAGCATCCAACATTTTAGCTTGCTTGGGTTGCACTGAATGAAGAGTTGTTTTGGACTGCATACAAA ...x.....--.........x:.x...x-------------.:.::......x....:....x.:....:xx.......x.....:..x.:....:.::..:.:... 9M2I17M13I66M 68/92 73.9% 107/94230402 0.0% 15/92 16.3% 90649957 NA +3037 chr4 + 190214555 155828596 155828595 155828677 82 GTATCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGTTTGAACCCTGGAGGCAGAGGTTGCAGCGTAGGTTGC chr4 + 94230402 76033206 76033205 76033287 76033206 76033205 76033287 82 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGC .:.:x....:.:...........::........x:xx.x...x.::........x.:..x:xx:..:..:..x::.x.x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 79795390 NA +3127 chr4 + 190214555 155829651 155829650 155829706 56 CATATATATATACATACACATATATATATACACATATATATACACACAGACAAAGA chr4 + 94230402 27759112 27759111 27759167 27759112 27759111 27759167 56 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACAGTAAGA .....:...x....x........:.:....::...:....:..:....x.xx.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 128070539 62144016 +9040 chr4 + 190214555 155829807 155829806 155830057 251 TAAATCTGAAGGTATCATGAAAAGGAAACTATTTT---ATTCTAAGTGACCATTAACACTCCTCTATCCTATTTTTATTTCCCA---------GATGATTCTGAGGTGGAGGAGTCCACTGGGTCATTTCAGATATCTTCAGCAAAAAGAAAATGCATATCCAGTAGAAATTGGTGAATAGATATTCAATAATTTCTATGATCGTGATCAGACTGGCCCCACAAAATAGACCCAGCTGACCACCAAGATCTGCTGTAATAAAA chr4 + 94230402 21936280 21936279 21936542 21936280 21936279 21936542 263 TAGAGATGAAGGAAATTTGGAGAAACAACTAGTTTTGTGCCTTCCCCAGCCACTAACATTCTTGTATTCCCTTGTTTTTCTCCACATGTGTTGGTTGGTCATGGGATGGATTATTCCACCGAGGTATTTCAGGAGCTTTCAATAGAAGAAAGAGGCACATCCAGAAGAAATTGGTAAAAATATACTCGAGCACTTCTATGATTGTAATCATACTGGCACCACAAAACAATCCAAGCTGACCACCTACATCAGCTGTGAAAGAA ..:.xx......x.x:x..:.:.::x.....x...---::::.xxx:::...:.....:..:.x...:.:x..x..x..::...---------.x..:.:x..:.:....xx.x.....:.:.x:.......:x:::....::.:..::..:.x...:......x..........:..x.x...:..:.xx.:.........:..:....x......x........:.:x..x...........x.x...x.....:.x.:.. 35M3I46M9I170M 168/251 66.9% 263/94230402 0.0% 12/251 4.8% 133893527 56321028 +6149 chr4 + 190214555 155831819 155831818 155831953 135 CTTACCAAGTAACTCAGACACACTCACCGCCTTTTGCTGCTGGGTTATCTTATAGTTTAGGTCACTATAGTTAATTTCAATTTTTACAAGATTCTCCCTAGGGATAAAAAAGAGAGTTAATATAGCTTAAGATTG chr4 + 94230402 21937124 21937123 21937255 21937124 21937123 21937255 132 CTTACCAAGCAACTCAGATATGGTCAAGGCCTTCTGCTGCTGAGTTATTCTGTAGTTCAGATCGTCATATTTAATGTCAATAATCACAAGGTTCTGCCTA---ATGACAAATACAAACAGTATTACTTGAGAGTG .........:........:.::x...xx.....:........:.....::.:.....:..:..:::...x.....x.....xx.:.....:....x....---..:.x...x.x.:x:.:...x:...:...x.. 100M3D32M 96/132 72.7% 132/94230402 0.0% 3/132 2.3% 133894695 56319860 +3281 chr4 + 190214555 155835393 155835392 155835464 72 AAGAATAATCTGAGTTTTGGAAAAAAAAAAAAAAAGAAAAAAAAACAGCATTCCCTAAGATCCTCTTGTTTC chr4 + 94230402 59083806 59083805 59083871 59083806 59083805 59083871 66 AAAAATAATCT------TGGAAAAAAAAAGAAAAAGAAAAAGAAACCACATTTGCATAGCTTTGTTTGTTTC ..:........------............:...........:....x:....:x.xx..x.::x:....... 11M6D55M 52/66 78.8% 66/94230402 0.0% 6/66 9.1% 96751587 93462968 +7575 chr4 + 190214555 155836658 155836657 155836875 218 TATCAATAATTTAAAAGGCTAGT--------AAGGTTACCTGATGTATTTCCGGCTTTGATTCAACTTCTTGGAAAGATATTTCAAAGCTTTTTGACTTGGAAAAGAGGAATAAGAAATAGTGGCCGGGTATTCTATTTCTTCACAAGAAACGGGGCAGCTAGAGTTATGTGTTCCTACTGTACATAAATCCTTAAATTCAATGTGGTCTGAAATGAAAATCAGGA chr4 + 94230402 21939606 21939605 21939827 21939606 21939605 21939827 222 TATCATTTCTTTATTAGGCAAGCTGTTAAAAATGATTACCTGATGTACTCTGGACTCTTCTTCAGCTTTGCAGAAATGTATTTAATGGCATTTTCTCCTCCAAAACTTGAATAGGTGACAGTGGTAGGGTAATGTGTTTCTTCACATGGGGCAGGGCAAGTGGAGTTGTGGGTTCCTACTGTACATAATCCTTTTACCTCTATATCATCTGA----AAATTCAGGA .....x.xx....xx....x..:--------.x.:............:.::x.:..:.xx....:...:x::....x:.....x.x:..x....xx.:.xx....xxx.....:.x:.:.....:x.....x.x.:..........x.:::.:.....:x.:.....:..x.................x:.:..x.x:..x..:.x:.....----...x...... 23M8I181M4D10M 148/214 69.2% 222/94230402 0.0% 12/214 5.6% 133897052 56317503 +4333 chr4 + 190214555 155838755 155838754 155838880 126 TATTACTTTGAGCAACTTTA--------------------ATATAAATCCTGAAAATAAAAGTAAATTAAGCACTTACCAAGTACAGGAGAAACACAGCTGAAGTACTTTTGTAGGTCACATTCTATCCCATATCCTTAAAAATAA chr4 + 94230402 21940974 21940973 21941119 21940974 21940973 21941119 146 TATTACTTTCAATAATTTTAGGTATTTTTTGCTATTTGGGATTTGCTTACAAAATATTAATATGAAATTATTACTTACGGATTGCAGGATAAACACAATTGTAATACTTCATTAAATCACATTCTATTCCATTTCCTTAAAAAGAA .........x.::..:....--------------------..x.:xx.x.x:..x..x..x:.:..x.x.x:......x:.x.:.....x.......::..x.:.....:xx..::...........:....x..........x.. 20M20I106M 89/126 70.6% 146/94230402 0.0% 20/126 15.9% 133897781 56316774 +7464 chr4 + 190214555 155842204 155842203 155842415 212 TACCAGGAAGAAGAAAAGGCACACATCCACATTGCTTTTTTATGTGCTGGGCTTTGCATTCCTTCAAGCAACCAGAAGTGCTGTAGCTGCTAAAATTCTGCAGCTTGATGTTAGGATTGCATTCTCCCCAAGGGTATTCTTGATGAACTGTCT------------TAAGATAAGATAAATACTGGGTTCAGGAGATGTGTTTACATCAATTCACTTATTTTCCA chr4 + 94230402 21941828 21941827 21942048 21941828 21941827 21942048 221 TACCTGGAAGAATAAAAGGCAAACAGCCGCACCAATCCTGTATATACCAGGCCTTGCATTCCTTCAAACAGCCATTAGTACTGTAAGTATCCTGGTACTGAAGTTTGATATCAGGCTTGCACTCTCCCCATGGATATTCTTGAATAATTGACTGTAGGGTATTGATAACAGAAGATATACATTTGTTACTTTTAATATAGTTA---CAATTTTCTCATATTTTA ....x.......x........x...x..:..:::x.::.x...:.:.::...:..............:..:...xx...:.....:x.:::xx::.x...x..:.....:.:...x.....:........x..:.........xx..:..x..------------...x.x......x.:.:.x.x.x.xxxx:..:.:x...---.....:x..:..x..::. 153M12I38M3D18M 143/209 68.4% 221/94230402 0.0% 15/209 7.2% 133900376 56314179 +9531 chr4 + 190214555 155843673 155843672 155843986 314 GTATTTACCTTCACTTGGCGGATGGTTACCCTTGCGTGCATTCCCACAGGTGACAACAAGCCTAACCCATCAAACTGTGGCACCTTCTTTGGTGAATGGATAACAAAGATGATCCCAGCATCAACGAAACCAAGGGCTGGGTTATCAGTGAATGCCTCCTGAAACAAAAA------------------------TATGTTTTTGCCCAAATTGCAAATTGACTATATCAGTTCTAAACAAGTTTAGGATTTAGTTTTATCATCTCATGATAGCGTTTGACTAATCCTAAATATTTTATGTTATATTTCTATCTCTTTTTGTCTAAAGTGTATGAAAAT chr4 + 94230402 21942525 21942524 21942842 21942525 21942524 21942842 318 GTGCTTACCTTCAGTTGCTGAATTGAGACCTGCGCATGCATGCCAACTGGTGTTAATAAGCCTAACCCATCAAAGCGTGGAATCTCTTTGGGTGAATGGATAACAAAAGTGATACCAGCATCAGTATAACCAAGGGCAGGATCATCAGTGAATTGCTCCTGATGCAAAAAAGAATTATTTAAAACAGTTTTGGTTTTGCTTTTGTTTAGAT----ATTTATCTAAATC--------------TTCAGatatctatttattatatctatataatatat--ctatatatatatcatatatattatataATAGTATCTATTTATTTAATAGATATGAAGAT ..::.........x...x:.:..x.xx...:x:..:.....x..x..x....x:..:.................x:....x.:..::..x.................::....x.........:::x..........x..:.:..........xx.......x:......------------------------.x..:.....:::.:..----.x..:x...x...--------------..x:...x.xxx.....:..x..xxx...:::.x.--...xx:x..x..xx.x...:......xx:x:.x...x...:.:...x:x:......:.. 170M24I17M4D13M14D35M2D59M 206/294 70.1% 318/94230402 0.0% 44/294 15.0% 133901148 56313407 +3048 chr4 + 190214555 155844303 155844302 155844335 33 TAAAAAAACAAAAAACAAACAAACAAAAAAAAC chr4 + 94230402 33047949 33047948 33047981 33047949 33047948 33047981 33 TAAAAAAACAAAAAACAAACAAACAAAAAAAAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 122796354 67418201 +3778 chr4 + 190214555 155847582 155847581 155847648 67 CATGGTGGCGCATGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGTATGAGAATCACTTGAACCCAG chr4 + 94230402 76033197 76033196 76033261 76033197 76033196 76033261 65 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ..::....:...:.--......:........:..::........x:x..x...x............. 14M2D51M 52/65 80.0% 65/94230402 0.0% 2/65 3.1% 79814385 NA +8356 chr4 + 190214555 155854043 155854042 155854330 288 CTTTGATTATATTTGAAGAATAGAAAATCGTTACCTTTGGGCTACATGGCTTTCCAAAAAACTCACAGTCCAACAAAGTGCTATTGTTGAGATAAAAACCTTTGTTCCTGATAAATTCCACAATGCTGAAGTTTTGGTGACTTGCAGCAAAATCAGTAGCCTCTCTAGAGCCAGTGGAATTGGCAGTAATTTCTTGAAGAT----GGAGGACTTTGGATACAATGTGCCATAAGAAAAAAATAACACCAAATTTGGCTACAGCATCTGTTTGGAACCTATTAGCAGGAATGA chr4 + 94230402 21944716 21944715 21944994 21944716 21944715 21944994 279 CTTCGGTTTTAGTAGAGGC---GAGAGTATTTACCTCTGGGTGACATGTCTTTCCAAAAAATTCACATTCTAGCAGTGTGCTGCCATTCAGATAAAATCCATTTTCCCTTGTAAACTCTTTAATGCTGAAGTTTTGGT---TTCCAAGAAG----GAAGCCATTT---AGCTCGTGGAAATATTTGTCTTCCATAGCAAATTTTTGGACAATTCCAGACACAATGTTCCAAAGGAAAAAAATGATTTGAAGGTTACTCACTGCATGAGCTTGAAACCTGTAAATGGGAAGGA ...:.:..x..x.x..:.x---..:.:.xx......:....:x.....x............:.....x..:.:..:x.....::::..x........x..x..x.:...x:....:..:x:.................---..x..:x..:----.x....x:.:---...:x......x.:x:x..xx.::x.x.x.:..----...x:.:.:::..:.......x...x.:.........:.:x:x..:x..:x::..x....xx.:...:.....:.x.:::....x.. 19M3D116M3D10M4D10M3D33M4I87M 184/275 66.9% 279/94230402 0.0% 17/275 6.2% 133909327 56305228 +11999 chr4 + 190214555 155863433 155863432 155863763 331 AAAAGTAATTTTTACCTGTTCAAATTACAAAATGTCACAGCTGGGAACTCCATCTTTTCCACATATTGAACCTCAATGGACGTTGTGGTTGGCCATGTGAAGTAGTTGAGCAAGCGAATGTAGATCTGCCATGTCACAAG--TGAGACTGAGCCCAGAACCACCACCAACCAGAGCACCCTGCGAATTTTGCTCCGGTTCTGAACAATATTGTGTATCCCATGAAAGGAAGTGGAGATGGCAAAGTCATGGTCAAACTTCTTTCGCTCAGTGGGAGATGGCAGTGGTTTCTTTGAAAGGCAAAGCTTTATCTTTTCTAAGAGTCCTTAAGGTT chr4 + 94230402 21946561 21946560 21946888 21946561 21946560 21946888 328 AAGCGTAACTTTTACCTGTTCAGGTTGCAAAAAGTCACAGCAGGGAATTTGACATTTTCCACATGCTGAACTACCACTGTAGTGGTGGTTGGCCAGCTGAAGTAGTAGTTAAAGCGACTGCAGATTTGCCAAATGACGATGCCAAGAC--AGCCTGTAACTACTAGCAGCCACAGCACTCTGCGTGTCCTGGTCTGTGTTTGAACAATGTTATACACTCCATGGAATGATGTGGATGAGGCAAACTCCTGACGATACTTCCTTCTGTCTTCCAAGCGTGGCAGCATTTTCTTT---AAGTACAGTCGTATCTGTTCCAATTTTCCTAAGAGTT ..:x....:.............::..:.....x........x.....:.:x.:x..........::.....:x.x.:x.xx..x...........xx.........x.xxx......x..:....:.....x:.x..:.x--::....--....::x...:..:.x..:...x.....:.....x:.::..x..:.xx.:........:..:.::.::.....:..x..x.....x:x......x..x..::x.x.....:...xx..xx:x:::x:......::x.......---.:.:.x..::x.....x...:..xxx....x.::... 140M2I6M2D143M3D37M 222/326 68.1% 328/94230402 0.0% 7/326 2.1% 133916872 56297683 +3859 chr4 + 190214555 155873088 155873087 155873170 83 CATGGTGGTGCATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAAGAGAATTGCTGGAACCCAGGAGGTGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--....:.:.........:..:........x.xx.x...x::..x........:..x.xx:..:..... 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 79839891 NA +5793 chr4 + 190214555 155904010 155904009 155904130 121 ATTTGCAGATATACTTTTAAAAAACTCCCCGTAGAAGGCAGCGAAGAAGACAAATCACAAACTGGTGTGAATAGAGCCAGCAAAGGAGGTCTTATCTATGGGAACTACCTGCATGTAAGTG chr4 + 94230402 21958751 21958750 21958871 21958751 21958750 21958871 121 ATTCTCAGATATAAATTTAGCAAGCTGTCTTTGAAAGATGAAAAAGGTGACAAATCACAAGAGGGAATAAATAAAGCCAGTAAAGGTGGACTTATCTATGGAGATTACCTGCAAGTAAGTG ...:x........xx....:x..:..x:.:x.::...::::x:...:x............:xx..x:.:....:......:.....x..x...........::.:........x....... 121M 86/121 71.1% 121/94230402 0.0% 0/121 0.0% 133945259 56269296 +7655 chr4 + 190214555 155905035 155905034 155905201 167 TTTCAGACAGGCTTTT--TATTTTTCATTTCAAGTTGGAAAAAGTTTTGAATGCACAAGAACTGCAAAGTGAAACAAAAGGAAATAAAATCCATGATGAACATCTTTTTATCATAACTCATCAAGGTAAGTTGCACAAAGGTTTTGGACAATATTCCACAGGCATTTCT chr4 + 94230402 21959762 21959761 21959930 21959762 21959761 21959930 169 TTACAAATAGCCTTTTATTATTATCATTTTTAAGTTGAACAAAATACTGAATGCCCAAGAGCTACAGAGCGAAAAGAAAGGAAACAAAATCCATGATGAGCATCTTTTTATTGTGACGCATCAAGGTAAGTAGGTGAGAGGACTAGAGCAATGGTTGTTTGGCATTCTT ..x..:.:..x.....--....x.:xx...:......:.x...:.x:.......x.....:..:..:..:....x:........:..............:...........::.:..x.............x.xxx.:...x:.x.::....:x.:xx:x......::. 16M2I151M 121/167 72.5% 169/94230402 0.0% 2/167 1.2% 133945273 56269282 +6952 chr4 + 190214555 155907698 155907697 155907798 101 CTGACAATGATTTCCTTATTACAGCTTATGAACTCTGGTTTAAGCAAATCCTCTGGGAGTTGGATTCTGTTCGAGAGATCTTTCAGAATGGCCATGTAAGT chr4 + 94230402 21960757 21960756 21960857 21960757 21960756 21960857 101 CTAACAGTGACTTTATTGTTTTAGCTTATGAACTTTGGTTTAAGCAGATTCTGTGGGAGTTGGACTCTGTTCGGGTGATCTTTCAAAATGGACATGTAAGT ..:...:...:..:x..:..x:............:...........:..:..x...........:........:.x.........:.....x......... 101M 84/101 83.2% 101/94230402 0.0% 0/101 0.0% 133946941 56267614 +8127 chr4 + 190214555 155908861 155908860 155909016 156 TCAGTGT-TTCATTTCTTAACCTTCAGGTCAGAGATGAAAGGAACATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCAGTGATCCTGAAACTGCTGGTGCAGCAGTTTTCCATTCTGGAGACGATGACAGCCTTGGACTTCAATGACTTCAGGT chr4 + 94230402 21961830 21961829 21961983 21961830 21961829 21961983 154 TCATTGTATTTATTTCTTA---TTAAGGTAAGAGATGAGAGGAACATGCTGAAGGTTATTACTCGAATGAGCAGAATTTCAATGATTCTGAAATTACTTGTGGAACAGTTCTCAGTTTTGGAAACCATGACTGCATTGGACTTCTTTGATTTCAGGT ...x...-..:........---..x....x........:...........x......:..x....:...x:.x..:.x...:....:......:.:..x...x.:.....:..x:..:....:..x.....x..x.........xx...:....... 7M1I11M3D135M 121/153 79.1% 154/94230402 0.0% 4/153 2.6% 133947031 56267524 +3798 chr4 + 190214555 155909857 155909856 155909992 136 TCCTCTCCTCTGGACTCCTCTCCCCTCCCCTCCCCTCCCCTCCCCTCTCCCCTCCCCTCCCCTCCCCTCTCCCCTCCCCTCT---CCCCTCCCCCCCCTTT----CTCTTCTCTGCTCTTCTCCTCTCCTCTCTTTCCCTTCC chr4 + 94230402 92917601 92917600 92917737 92917601 92917600 92917737 137 TCTTCTTCTCTGTGCTAG------CACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCC ..:...:.....x:..xx------.x..x::.....::.:x..::.:...:...x.:...:.:....:........::....---.x:..:.:..:...x:----:..x.:...x.x::.x.:....x::.x........:.. 18M6D58M3I16M4I38M 84/130 64.6% 137/94230402 0.0% 13/130 10.0% 62992256 NA +12409 chr4 + 190214555 155910012 155910011 155910214 203 TTTAATCTCAAAGAGAGTACTTATCTCCAGCATCAGGCTTCCAGAGTTTGCAATTCCGACTATTAGAAAACAAGATAGGTGTTCTTCAGAACATGAGAGTCCCTTATAACAGAAGACATTATCGTGATAACTTCAAAGGAGAAGAAAATGAACTGCTACTTAAATCTGAGCAGGAAAAGACACTTCTGGAATTAGTGGAGGTA chr4 + 94230402 21965320 21965319 21965522 21965320 21965319 21965522 203 TCTATTCCCAAAGAGACTACTTAAGCCCAGCCTCAGGTTTTCAGAGCCTGCAATTTCGTTTGCTAGAGAACAAGATTGGTGTTCCACAAAGCCTGAGGGTCCCCTATAACAGAAGGCATTATCGTGATAACTTCAAAGGAGAGGATTATGAACTACTGCTGAAATCAGAGCAAGAGCCAACACTTCTGCAACTTGTGGAGGTA .:..x..:........x......xx:.....x.....:..:.....::.......:..x:.::....:........x.......:x..:.:.x....:.....:...........:..........................:..xx.......:..:..x.....x.....:..:xx:.........x..:.x......... 203M 161/203 79.3% 203/94230402 0.0% 0/203 0.0% 133944692 56269863 +6345 chr4 + 190214555 155911476 155911475 155911699 224 AAAAAATAATGTTTATTTAAGGCATGGCTGGAAAGAACTCCAGGTTTAGAGCCACATGGATTTAACTTCTGGGGAAAGCTTGAAAAAAATATCACCAGAGGCCTGGAAGAGGAATTCATAAGGATTCAGGTATTTAGATGACATGAGTTAATATAAATTCAATACAGAAATA----------------TTCAAAATTTTATTTTA-ATTATTTTTTGCTTTTCTCTTAACCTTTTCTCTTT chr4 + 94230402 21965825 21965824 21966054 21965825 21965824 21966054 230 AACACATTATTATTGTTAAAGGCATGGCTGGAAAGAACTCCAGGACTTGAGGCAGAAGGATTTGATTTCTGGGGCCAATTTGAAGTGAATATTTTAAAAGGACTAGAAGAGGAATTTGCCATAGTACAGGTATGT--------TGTGTTGATCCAACTAC-ATGCAGAGACAGCTGGAAATTATGTTCTTTGAATTGGCATTTTGTATCACTCCTGGTTTCTCACTT--CATTTACTCTTT ..x.x..x..xx..:..x..........................x:.x...x..x.x......:.:........xx.::.....:x:.....:x:x.:...x..:...........:::x.x::.x.......x.--------..x...:..x:..x.x.-..:....:.:.----------------..::..x.xx:.....:-..:.:.::.x.:..:..x...--.x...x...... 135M8D17M1D11M16I17M1I21M2D12M 149/213 70.0% 230/94230402 0.0% 28/213 13.1% 133945651 56268904 +3027 chr4 + 190214555 155912301 155912300 155912360 60 ACAGGAAATTAAATAAATACTTGTAAAGCATTGAAAGCAGAAGTCAGAATAGTTATCTCT chr4 + 94230402 27148218 27148217 27148277 27148218 27148217 27148277 60 ATAGCAACTGAAATCAATGCTTATAATGTAATGAAAGCTTAAGTCAGAATAATCACCTCT .:..x..x.x....x...:...:...x.:.x.......xx...........:.:.:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 128764083 61450472 +7160 chr4 + 190214555 155914311 155914310 155914483 173 TTTTTCCTAAAGGCTAAAGAAGAGTCTGAAGAAAAAGAGGAACAGGTGGCTGAATTTCAGAAGCAAAAAGAGGTGCTACTGTCCTTATTTGATGAGAAACGTCATGAACATCTCCTTAGTAAAGGCAGGTATTTTTACTTTATGAATCTTTTCCCTGGAATGTGTGAATATGA chr4 + 94230402 21966877 21966876 21967041 21966877 21966876 21967041 165 TTTTGATTTAAGGCCAAACCAGAATCAGAAGAAAAAGAGGACTTGTTATCTGAATTCCAAAAGCAGAAAGATACATTACTTTCATTATTTGATGAAAAACGGCATGAACACCTGCTTAGTAAAGGTAG--------AGTATATTAATATACACATTTGGATTTTTAAATATGA ....xx:.x.....:...xx...:..x..............x:x.x.:x.......:..:.....:.....x::::....x..x...........:.....x........:..x...........:..--------.x.x...x...x.x:x.x:.x.:..x.x.:....... 128M8D37M 121/165 73.3% 165/94230402 0.0% 8/165 4.8% 133947434 56267121 +4788 chr4 + 190214555 155915740 155915739 155915916 177 TATATTGATTTCTAAACACATGTAATCCATTAAATTTTTTAAGATGACGATGCCAAATTAAT-ACAAAATTACCTTA----------------AATGACCTAAA-----AAATTTAAATTTAGTATGTATTTTGCAGGTGAAAGACGGCTGTCATACAGAGCACTTCAGGGAGCATTGATGATATATTTTTACAGGTAA chr4 + 94230402 21967007 21967006 21967191 21967007 21967006 21967191 185 TATATTAATAT----ACACAT--------TTGGATTTTTAAATATGATAAATACAGAATAATCACAAAGTAGCACTACATTTTCAGAGTAATCAACAAACTAAAGCAACAAACTAAAGAT--GTTTGTATTTTGCAGGAGAAAGAAGACTGTCTTATAAAGCACTGAAGGGTGCCCTAATGATCTACTTCTACAGGTAA ......:..x.----......--------..::......x..x....::.xxx..:.x....-.....:.x:.x:..----------------..::.x.....-----...:.x..:x.--..x.............x......x.:.....x..:.:......xx....x..x:.:.....x..:..:......... 11M4D6M8D33M1I14M16I11M5I11M2D77M 122/163 74.8% 185/94230402 0.0% 36/163 22.1% 133948733 56265822 +3122 chr4 + 190214555 155916956 155916955 155917004 49 AAAACAAAACAAAACAAAACAACAACAAAAAAAACAAAACAAAAAAACA chr4 + 94230402 5941513 5941512 5941561 5941513 5941512 5941561 49 AAAACAACACAGAATACAACAACAGCAACAAAAAAAAAAAAAAAAAACA .......x...:..:.x.......:...x.....x....x......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 149975443 40239112 +5631 chr4 + 190214555 155917366 155917365 155917480 115 TTCTTCTTTTTCTTCTTTTTTTCCTTTAGGGAAGAGCCTAGGTTCCAGGTGCCTTTTCAGTTGCTGACTTCTCTTATGGACATAGATTCACTGATGACCAAATGGAGATGTAAGT chr4 + 94230402 21967448 21967447 21967562 21967448 21967447 21967562 115 TTTTACTGTACTCTCTTTCATTTTCCAAGAGAGGAGCCCCGTTTTCAGGTTCCCTTTCAGCTTCTTACCTCTCTTATGGATATCGATGTACTCATGACAAAATGGAGATGTAAGT ..:.x..x.x:::.....:x..::::x..:..:.....:x.x..:.....x..:......:.x..x..:...........:..x...x:...x.....x................ 115M 83/115 72.2% 115/94230402 0.0% 0/115 0.0% 133949918 56264637 +7654 chr4 + 190214555 155918132 155918131 155918267 136 TTTGTATGT-TTGCCTAGATAACCATGTGTGCATGGTGCACAGAATGCTGGGCAGCAAAGCTGGCACCGGTGGTTCCTCAGGCTATCACTACCTGCGATCAACTGTGAGGTAGG--TGGGGAAATTCTCCTTTCTTCCT chr4 + 94230402 21968059 21968058 21968197 21968059 21968058 21968197 139 TTTGTATGCATTGTTTAGATAACCATGTCTGCATGGTGCACAGAATGATTGGCAGTAAGGCTGGCACAGGAGGTTCATCAGGCTACCAGTACTTGCGCTCAACAGTGAGGTAAGAATAATGCATTTCCCCCTTTTACCT ........:-...::.............x..................x.x.....:..:........x..x.....x........:..x...:....x.....x........:.--.::x.x.x...:..:..:.x... 9M1I104M2I23M 110/136 80.9% 139/94230402 0.0% 3/136 2.2% 133950073 56264482 +12054 chr4 + 190214555 155919828 155919827 155920230 403 TTTTTCCAGTGATAGGTACAAGGTATTTGTAGATTTATTTAATCTTTCAACATACCTGATTCCCCGACACTGGATACCGAAGATGAACCCAACCATTCACAAATTTCTATATACAGCAGAATACTGTGATAGCTCCTACTTCAGCAGTGATGAATCAGATTAAAATCGTCTGCAAAAT------CTATGAAGAATACTGGT-TTCACAGCCTATTTTTTATTTTCTATGGA------------TTTTCATAAATAC-AGTTTGAATATATGTATGCATATATTGTTCAGCACCACG---ATGCTCTGATTTAATTCTAGAAACAATTTGATTACCTCTTGTTTGTGACAAGACTAA----GCATTAAGATGAG-------AAAGAATACATTTAAATAGTAACATTGTACA--TAGGGTGTTTTCCTATTAAAAATTCA chr4 + 94230402 21968922 21968921 21969351 21968922 21968921 21969351 430 TTTTTTCAGTGACAGATACAAGGTGTTTGTGGATTTGTTCAATCTTTCAACATTTCTAGTGCCAAGACAGTGGATACCAAAGATGAATCCAACCATTCATAAATTCCTTTATACAGCAGAATACTGTGACAGCTCCTATTTTAGCAGTGATGACTCTGACTGAACTATCTTTCTAGACTGGTTGCTGCAAAGAACTTCAGTACTTTCACCCTGACTGGTACTATTCCTGAACTATAGCAACTGTTCTCATCAGCATGGGTGTGTAGATATTTATTTATGTATGA--CAGAACTAGGTGAATACTCTACTTGACTTATAGAAGAAATTTAATTC-------TTTGTAGAAAAAGTAATCTTGCATTGATTCAGGCTCTATTAAAGAAAAAATTTGATTTGAATTAATGGCCAGTTAAACTGTTTGTTTCTGAAAAATCTA .....:......:..:........:.....:.....:..:.............x:..::.x..xx....x........:........:...........:.....:..x....................:........:..:...........x..x..:.:..x.xx::.x.x.:.:------..:::.....:x:::..-:.:x..x...:x:.xx..:.x.::x..:.------------..:....x.::.:-:..x..x.x....x...x:..:...x:--...x..:.x.---..:....:x..x.x..x.....:x.....:...x-------.....::x..:.x...----.....:.xx:::.-------......x.x....:.x.x.x.x:.x..xx..--..::x.....x::.x.x......::. 178M6I17M1I29M12I13M1I27M2D10M3I34M7D16M4I13M7I31M2I26M 275/394 69.8% 430/94230402 0.0% 45/394 11.4% 133950906 56263649 +6070 chr4 + 190214555 155928329 155928328 155928430 102 GACTTACCACAAACATTACTTCCCATTTTGACATGGGCATAACCATCTACTCCCCAAGAACTTCCCCAGGAATTCCGCACAATCCAATATGGAGTGCTTCCT chr4 + 94230402 21972516 21972515 21972617 21972516 21972515 21972617 102 GACTTACCACAGACATTACTGCCTATCTTAACACGAACGTAGCCATCTATTCCCCATGTACGGCCCCAAGAGTTCTGTACAATCCAGTAAGGGATGCTACCT ...........:........x..:..:..:...:.::.:..:.......:......x.x..xx.....:..:...:.:........:..x..::....x... 102M 78/102 76.5% 102/94230402 0.0% 0/102 0.0% 133955813 56258742 +10617 chr4 + 190214555 155929536 155929535 155929722 187 ACTTACCTGTTTTATCAAACCCAGTTATGAGAACTGCATGATTTGCTTCTCCACTAGAGCAGTGATGCTGTATAATGCCTCCCAGATAATCTTGCCAGCTCACTGCATCTACTATGACTACCAAAGGGCCAAAGGTAAGAAGTGCTTTTGCCATTTCATCTTCTTGGTCACTACCAAAAGAGGAAAT chr4 + 94230402 21973035 21973034 21973221 21973035 21973034 21973221 187 ACATACCTGTTGTGTCAAAACCAGTGATAAGTACAGCATGATTTGCTTTTCCACTGGAGCAGTGATACTGTATGATCCCACCAAGATAATCCTGCCAGCTAACTGCATCTACTGTTACTGCCAAAGGACCCCAGTCAACAAGTACTCTCATCATCTCCTCTTCCTGACCACTGTGAAAGAAGTGAGT ..x........x.:.....x.....x..:..x..x.............:......:..........:......:..x..x..x........:........x............:.x...:.......:..xx..x:..x....:..:.:::...:..x.....:..::....::x...::..x:.:. 187M 143/187 76.5% 187/94230402 0.0% 0/187 0.0% 133956501 56258054 +7585 chr4 + 190214555 155937300 155937299 155937510 211 CCAGTCAATAGATCATAAATTAAAAATGTA-----TAAAGAAAAACATAATACAATAAGATCTTTACCTGAAGTCATATGCAGAATAACCTTTGATTGAAAATCCAGAATGTGAACCAGAAAAGTAATGGCACAGACCATTTTGTGCTTTAAAAGGATATTCTGAATCTTTCACCAGTTTTACTTGCATCTA-AAAGAAAACAATCACTGAACATGT chr4 + 94230402 21973567 21973566 21973774 21973567 21973566 21973774 208 CCAGCTAGCAAACACTGAAGTGAAAGTACAGCAACTAAAAAGAAGCA----ACAGCAG-----TTACCTGAAGTCATATGCAGCAAATCCTGTTATTGAAACTCCAAAATCAGAGTGAGGAAAATAATGGCACAGTCCTGTCTGAGCTTTAAAAGTGTACTCTGAATCTCTCACAAGTTTGACTTTTGTCTGCAAAGAGATAAGTGAATGAGAATGT ....::.::.:.:xx.:..x.:...:.::.-----....:.:..:..----...::.:-----....................x.x.x...x.x.......x....:...xx..::x..:...:...........x..xx.:..x..........x:..:.........:....x.....x....x::...:-.....:.xx.:.x.x...:x.... 30M5I12M4D7M5D129M1I24M 145/202 71.8% 208/94230402 0.0% 15/202 7.4% 133963733 56250822 +9899 chr4 + 190214555 155939310 155939309 155939541 232 AACACACAGTAAACAAGCAAAAAAGGA-----AATAAAGAGTTTAAGAGGT-TGAGAGACTAGTCACCTTGTTTAACCAGTTCAAAGCATTGAGAGTAGAGCCTCCATTGCAGCCATAATTATTATACGAACAGTCAATGACCTGCTGGACACTTAGGTCTTCCAGGGGCTTCCCCTTTATTGCATAAGCAGATTCCACTGCCCCCACCACGCTGAAGGCCCAGCATCCTCCACACTG chr4 + 94230402 21974116 21974115 21974353 21974116 21974115 21974353 238 AAAACAAACCAAACGAACAAAACAACAGTGCTAAAGAAGGGTTCAAAATTTATAGGAAGTTTCAAACCTGATTCAGCCAGCTCAAAGCAGTTATTGTGGAACCACCACTGCAACCATAATTACTGTACGAACAATCGATAACTTGCTGTACGCTGAGTTCTTCCAGATTATGTCCCTTAATTGCATAGGCAGACTCTATACCACCCACAACACTGAAAGCCCAGCAGCCTCCACACTG ..x...x.x:....:.:.....x.:x.-----..x:...:...:..:.xx.-.::..:::.xxxx....x:..:.:....:........x.x.xx..:..:..x...:....:.........:.:........:..:..:..:.....x..:..x..x........:xxx.x:.....x........:.....:..:.:xx.x.....x..:.....:........x........... 27M5I19M1I186M 165/232 71.1% 238/94230402 0.0% 6/232 2.6% 133965194 56249361 +6705 chr4 + 190214555 155942262 155942261 155942482 221 CAAAGCTGCCTTT---CAATGCTTAGATGATTAGAAAAGAAGAGGGATTTCAACGTACCATCTGCTGGTTTCTCACTTGTGTCACAACCTGCTTGTCCCTCCAGTCAAATCTTAACGGCAAAGA----------CACATTGGGGATGGACATATGTACTTCTGCTGAGTATCTGGGAAACTTGGAAGGTTTGCTTCTTAAATAAATGGCTGAGTAGAAACATAAAATGAAAATA chr4 + 94230402 21975431 21975430 21975641 21975431 21975430 21975641 211 CAGAACTGTCTCTAACCAGTGCTT-GAGAATCAGCAAAAGGAAATCACCGCCACTTACTGTCTGTTGATTTCTCACTTCTGCAATGACTTTCTTGTCCCTCCAGTCAAACTTCTTTGGCAAAGGTTTTTCCTCTCCCTTTGG-------------CACTTTTAT---GTATCTGGGGAGTTTGTAAGGTATGCTTCTTAAATAAATAGCT------AAACACAGAATACAAACA ..:.:...:..:.---..:.....-..x:..:..x...::::.:xx.::x.x..x...::....:..:..........x..:x.::..:.x..................::.:xx:.......:----------.x.x....-------------:....:.::---.........:.::...x.....x................:...------.....:.:...:x...:. 13M3I8M1D99M10I8M13D9M3D43M6D18M 142/198 71.7% 211/94230402 0.0% 36/198 18.2% 133966831 56247724 +5347 chr4 + 190214555 155943151 155943150 155943281 131 TATACCTTTAAACTCTTCAGGAAACAAATAGGAAAACTGATTTATTCCATAGAAGGCGGTGGAGTTTTCACTGGGAAATAAAGAATTCAAGTATCGATGTCTATTAAGACTTTCCTAGAAGAAAAACAAAA chr4 + 94230402 21975862 21975861 21975988 21975862 21975861 21975988 127 TGTACCTTTGAACTCCTCAGGAAACAGGTGAGAAAACTGATTTTTTCCATAGAAAGCAGATCCATTATCATTTG---ATGGTGAATTCAGTAATCTAATTCTTTTTGCACTTTCCT-GAACAGAAACAAAA .:.......:.....:..........::.::............x..........:..:.xxxx:..x...:.x.---..::x.......:xx...x.xx...x..x:x........-...x.:........ 74M3D39M1D14M 94/127 74.0% 127/94230402 0.0% 4/127 3.1% 133967289 56247266 +3132 chr4 + 190214555 155957210 155957209 155957266 57 TCTTTGTTTTTTTTTTTTTTACCTTTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTT chr4 + 94230402 54623007 54623006 54623063 54623007 54623006 54623063 57 TCTTTACTTTTTTTTTTTTTAACTTTTTTTTTTGTTTTGCTTTGGTTGGTTGGTTTT .....::..............x.........x.x.x..xx....x...x..x..... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 101334203 88880352 +3226 chr4 + 190214555 155957225 155957224 155957271 47 TTTTTACCTT--TTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 55690034 55690033 55690082 55690034 55690033 55690082 49 TTTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT ...:.x....--......x........:..................... 10M2I37M 43/47 91.5% 49/94230402 0.0% 2/47 4.3% 100267191 89947364 +3086 chr4 + 190214555 155957231 155957230 155957274 44 CCTTTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGAG chr4 + 94230402 12568753 12568752 12568796 12568753 12568752 12568796 44 CTTCTGTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTAAG .:.:.x....x.........................x....:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 143388478 46826077 +3455 chr4 + 190214555 156013882 156013881 156014031 150 AGAAGAAG-AAGAAGAAGAAGAAGAA--GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG--AAGAAGAAGAAGGAGAAGAAGAAGAAGAAGA chr4 + 94230402 59372566 59372565 59372721 59372566 59372565 59372721 156 AGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGA ..::....-..x.:....:.:..:x.--...::x:.x...x..x..:.:...:..x..x..x..x..-..:.::.:x..:.::.:.::.:..:..x..x..:.:.:.:..x.:x..x..:.:.--...x.:x.:.....:..x..x..x.:..... 8M1I17M2I39M1I55M2I31M 94/150 62.7% 156/94230402 0.0% 6/150 4.0% 96641316 93573239 +3017 chr4 + 190214555 156013930 156013929 156014024 95 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAG chr4 + 94230402 10269798 10269797 10269892 10269798 10269797 10269892 95 AAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAG .:..:x..x::..........::.x:.....:x.:...:xx.....:.:x.x......x..::::....:x.xx::.....::..:x.:.x.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 145744132 44470423 +3705 chr4 + 190214555 156013995 156013994 156014090 96 AAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAA chr4 + 94230402 1818707 1818706 1818802 1818707 1818706 1818802 96 AGGAGGGAGAGTAAGCAGGAGGATATGGGAATGGAGAGGGGTTGGAAGAGGAGGAGTAGGAGACAGAGGTGGGATGAgatggagatggggatggga .:..:.:...:x...x.....:.x.x.:::.x.:.....:.xx...:.........x.....:x.....x:.::x:...x.:...x.::..x..:. 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 154195288 36019267 +3011 chr4 + 190214555 156017576 156017575 156017638 63 AAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAAGGCACTTTTGTGAATGGAAGATAAATTGAA chr4 + 94230402 28185858 28185857 28185920 28185858 28185857 28185920 63 AGAAAAAGACTGAAAAAAAAAGAAAAAGAAAAAAGCAGTTATGTTAGGAGATACTAAATTAAA .:.....:.xx:..........:..........:...x..x...x.:x:..x:x......:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 127831718 62382837 +3072 chr4 + 190214555 156027608 156027607 156027665 58 TGTGTGTATATACATATACACACACACACACACACACACACACACACACACAATGGAA chr4 + 94230402 23247723 23247722 23247780 23247723 23247722 23247780 58 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAA .........::...:.:.:x:.::x...:.:::.......:............x.:.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 132779885 57434670 +3347 chr4 + 190214555 156035636 156035635 156035801 166 TTTTATGCATACATAAATATGTATACATAAA------AAATTTATGCAATATATATATACTTCATAGTATATATACTTTATATTATATATAATACTACATACTGTACCATAAATGGTATA----TAGCA-TATATACACTATAAAGCATGTATTTACTATAGTATATATACTATTTA chr4 + 94230402 26320210 26320209 26320376 26320210 26320209 26320376 167 TCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATAT-TTATTATGTATCT-------AATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCAT--TACAGATCCTTTTTA .:....:::..:x:....:.xx...:x...x------........x:x.:..:........x....x..........x....:x......-x..:..::..::x-------...:.....----...:.-.:....:::x...:..::x.:.x::.::..--..:.x..x..x.... 31M6I53M1D13M7D9M4I5M1I30M2D15M 105/156 67.3% 167/94230402 0.0% 21/156 13.5% 129715426 60499129 +3330 chr4 + 190214555 156035754 156035753 156035903 150 ATATATACACTATAAAGCATGTATTTA-CTATAGTATATATACTATTTATATGGTATATATAAATATATAGTATATATTATACATATACACTTTATAGTATATATATATCATAGTGTATATACTATTTATATAGTGTATATAAGTGTATAT chr4 + 94230402 32061380 32061379 32061518 32061380 32061379 32061518 139 ATGCAAGCATTTTAAGGTAATTATTTAATTACAATCT---TGTTTCATGTATCATTTTTTTAAATAAACAGTGCATATTATACATATATATGTTATACTCAGTGTATGTTATACATAATATAC---------AGTGTATATTAGTTCATGT ..::.x:..:.x...:.:.xx......-:..:.:.x.---.::.x:x.:...x:.x.x.x......x.:...::..............:.:x.....x.xx:.:...:.:...xxxx......---------.........x...x:..:. 27M1I9M3D83M9D19M 91/138 65.9% 139/94230402 0.0% 13/138 9.4% 123974374 66240181 +3065 chr4 + 190214555 156046583 156046582 156046630 48 TTCTCCTCCTTCCTCCCCTCCCCTCCCCTCTCTTCCCTTCCCCTACCC chr4 + 94230402 71202529 71202528 71202576 71202529 71202528 71202576 48 TTCTCCTCTTTTCTTCCCTCCGCACCTCCCCCTTCCCTCCCCCCATCC ........:..:..:......x.x..:.:.:.......:....:.:.. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 84844054 NA +3187 chr4 + 190214555 156046583 156046582 156046630 48 TTCTCCTCCTTCCTCCCCTCCCCTCCCCTCTCTTCCCTTCCCCTACCC chr4 + 94230402 71204999 71204998 71205046 71204999 71204998 71205046 48 TTCTCCTCTTTTCTTCCCTCCGCACCTCTCCCTTCCCTCCCCCCATCC ........:..:..:......x.x..:...:.......:....:.:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 84841584 NA +3380 chr4 + 190214555 156051697 156051696 156051778 82 GTGGTGGCACGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTGGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----..:.............::........x.xx.x...x....x......:.:..x:xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 80018496 NA +3398 chr4 + 190214555 156059549 156059548 156059685 137 AGATAGATAGGTAGATATATCTAACAGAATAGGATATATATATATATCTTCCAAAATCACATCAAACAATTCTTATAATAAATCAATATATATATACTATAATGTATTAGAGTTATTTCTAGCTAATTTTGAACTTT chr4 + 94230402 56797813 56797812 56797938 56797813 56797812 56797938 126 AGAAAAAAAAGAAGCTATACTTGACAGAACATGATATATATATATATTTGCTTAGCATACATACAACAATCATCATATCATATGAGCACTTAT-----------TAACACAGTTATTCTCAAATTATATTGGCTTTT ...x.:.x.:.x..x....::.:......:.x...............:.x.:x.:xx:....xx......:x.:...x:.x..x.::.:x...-----------..x:.x.......:::.:x.x..x...:x:... 93M11D33M 81/126 64.3% 126/94230402 0.0% 11/126 8.7% 99261736 90952819 +3054 chr4 + 190214555 156073363 156073362 156073421 59 AGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTAACTCTACAACTTTTCAAATATTCTTCT chr4 + 94230402 27254042 27254041 27254100 27254042 27254041 27254100 59 AGGTTTTTGTTTGTTTGTTTGTTTCCCTTTTAATCTTCTTCCCCTTCAAATATTTCCCT ..x.....................x::......:::.x:xx.::..........:::.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 128819321 61395234 +3074 chr4 + 190214555 156085702 156085701 156085752 51 TTCAGCATCATTTTCGCAGGCTCATCCCAGCAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 45928284 45928283 45928334 45928284 45928283 45928334 51 TTCAGCGTTATTTTTACAAGTTCTTATCAGTAAAAAGAAAAAAAAAAGAAA ......:.:.....::..:.:..x.x:...:.....:..........:... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 110157418 80057137 +3606 chr4 + 190214555 156091126 156091125 156091208 83 CGTGGTGGTGCTTACATGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAACTTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......--..:....:.............::........x.xx.x...xx:.......::..:..x.xx:..:..:.. 11M2D70M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 80057929 NA +3189 chr4 + 190214555 156100511 156100510 156100571 61 CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATGCATGCCT chr4 + 94230402 85834537 85834536 85834597 85834537 85834536 85834597 61 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT .:.x.....x.................:.xx..:..x::...:....:..x..:....::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 70265974 NA +3023 chr4 + 190214555 156100512 156100511 156100564 53 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATG chr4 + 94230402 85834542 85834541 85834594 85834542 85834541 85834594 53 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATG ....x.................:.xx:....x::...:....:..x...:... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 70265970 NA +3186 chr4 + 190214555 156100514 156100513 156100566 53 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATGCA chr4 + 94230402 79265519 79265518 79265571 79265519 79265518 79265571 53 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCA .............::........xx........:...:.::.:.::.:.:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 76834995 NA +8767 chr4 + 190214555 156101735 156101734 156101951 217 CAGCTGTACTACAATTATGTTTAAGGCATTCCTTGTAACGGAGACAG-CAACTCATCAGCAGAGGAGAATGTTCAGAGAAACTATCTAAATGTGCCAGCAAAAACATCTGTTCAACTCACAAATTTATGTGAGATAATTCAGCTGTATGGAATTAAAGTAAGTTTTCATTACTATACCCTATCAAACTGTAAAATGGATTATATCATGACATATAGAT chr4 + 94230402 22028761 22028760 22028970 22028761 22028760 22028970 210 CAGCTCTACCACTGTGATGTAAAAGGAATTCCTTGTAACATAGAAGGGCACCTCATCAGCTGAGAGGAATGTGAGGATAAGCAGTCTAAATGAGCCAGCAGAAACATCTGTTGCACTCTTAAATTTATATGAGGCTGTTCAGCTGTATAGAATTAAAATTG--TTTCACT----TACTTTAATAAACCATAAGA--GATTGCATTTCAAATTACAGAT .....x...:..x:.x....xx....x............:x...x:.-..x.........x...::......xx:..x..:.x:........x.......:...........xx....x:........:....::x:...........:........:.x:--.....:.----...::..x:....::...:.--....::..:x::.xx..:.... 47M1I113M2D7M4D20M2D22M 154/209 73.7% 210/94230402 0.0% 9/209 4.3% 134072974 56141581 +3140 chr4 + 190214555 156120090 156120089 156120130 41 GTACACATATATGTGTGTATATATATATATATACATACACA chr4 + 94230402 28919106 28919105 28919146 28919106 28919105 28919146 41 GTCCATATATATGTGTGTATATATAAATATATGCATACACA ..x..:...................x......:........ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 127200984 63013571 +3314 chr4 + 190214555 156121599 156121598 156121698 100 ATGGTGGCGCATACCTGTAATCCCAGCTACTCGAGAGGCTGAAGCAGGAGACTCACTTGAACCAGGTAGGCTGAAGCTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033198 76033197 76033289 76033198 76033197 76033289 92 ACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::....:...--.x....:.:.........:..:.......:x.xx.x..xx..........x:.x..x:.x::....:..------..x..x...... 11M2D69M6D12M 66/92 71.7% 92/94230402 0.0% 8/92 8.7% 80088401 NA +3282 chr4 + 190214555 156137415 156137414 156137553 139 TCTTTCTCTTCTTTTTTTTTTTTTAGTGTATTTCTCAATTTAGCACAGAAATGTATAGTCTTGTCTTATTTTCAAAATCATCACATGTGTATTATTCTTGGATCCTTAACTATATTGAGAGCACCTTACATTTCCTCAG chr4 + 94230402 53372993 53372992 53373121 53372993 53372992 53373121 129 TCTTTCATTTTCTTGATCTTTTCTAGTGTATTTGTTAGTTTAAAACTGGAAAGGATACTCTGGACTGCTTATTGAGGTGATTACTTTTGCACTGTTGCTATAATTTTAA----------AAAATGCTACTTTTCCTTAG ......x:..::..xx.:....:..........x.:.:....:x..x.:..x.x...x...x.x..xx..x.::.::.x..:..x.x..:.:.:..x:.:x.x::....----------.:x.:x:...x......:.. 109M10D20M 81/129 62.8% 129/94230402 0.0% 10/129 7.8% 102764422 87450133 +3391 chr4 + 190214555 156161726 156161725 156161824 99 ATGTGTTTATATAAATATGTGTGTATATATTATATGTGTGTATATATATGTGTATGTGTATATATACACATATATGTACACACACACATATAATGTATA chr4 + 94230402 67514867 67514866 67514960 67514867 67514866 67514960 94 ATGTGTTTACATGCACATGTGTCCATATTTTGGGTGGGTATTTATAGATATGTATGTGGGTATGAATATATA-----GTACATTTAAATAAAGTGTGTA .........:..:x.:......x:....x..:x:..x..:.x....x..:........x:...:x.:.:...-----::...:x:.x...x.:...:.. 72M5D22M 64/94 68.1% 94/94230402 0.0% 5/94 5.3% 88646859 NA +3010 chr4 + 190214555 156161748 156161747 156161798 51 GTATATATTATATGTGTGTATATATATGTGTATGTGTATATATACACATAT chr4 + 94230402 63851994 63851993 63852044 63851994 63851993 63852044 51 GTATATATTTGATCTGTGTATATATACGTGTATGTGTGTGAACGCATGTAT .........xx..x............:..........:.:x.::..::... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 92309754 NA +3418 chr4 + 190214555 156161760 156161759 156161868 109 TGTGTGTATATATATGTGTATGTGTATATATACACATATATGTACACACACACATATA-ATGTATATACA-------TATGTATATACATTATATTGTATTACATATATACATATAT chr4 + 94230402 79265520 79265519 79265636 79265520 79265519 79265636 117 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCAT .......:.:.::......:..xx.:........:.:.::...:.....:..x.:...-x...:.x:...-------...:..x..:..:.x.:::x.x..:x:.:..:.x..::.. 58M1I11M7I40M 71/109 65.1% 117/94230402 0.0% 8/109 7.3% 76896240 NA +3027 chr4 + 190214555 156166834 156166833 156166903 70 AAGATGCCTGAAAAAGTTTGATTTTGGCTAGTTGTCTGTTTTCTCCATTTGTCCTACTGTTTGTCCTTCA chr4 + 94230402 73876271 73876270 73876340 73876271 73876270 73876340 70 AAAACATCTGGAGAAGACTGATTTTGTGTGGTTTTCTTTTTTTTCCTATTGTTCTGCTTTCTTTCCTTTA ..:.:::...:.:...x:........xx.:...x...x....:...xx....:..:..x.:.x.....:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 82290563 NA +3644 chr4 + 190214555 156174661 156174660 156174721 61 TGTTGTTAGTGGGTTTTTGTTGTTTTTGTTGTTGT----TTCTTTGTTTGTTTGTTTTTTTCCAG chr4 + 94230402 74136525 74136524 74136589 74136525 74136524 74136589 65 TGTTGTTAGCGGGGGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCAG .........:...xx...x.....x..:.......----..:...............x...:... 35M4I26M 52/61 85.2% 65/94230402 0.0% 4/61 6.6% 82038136 NA +3023 chr4 + 190214555 156174674 156174673 156174716 43 TTTTTGTTGTTTTTGTTGTTGTTTCTTTGTTTGTTTGTTTTTT chr4 + 94230402 57172800 57172799 57172842 57172800 57172799 57172842 43 TTTTTGTTCTTGTTGTTGTTGTTTTGTGGTTTGTTTGTTTTTT ........x..x............:x.x............... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 99001874 91212681 +3010 chr4 + 190214555 156174683 156174682 156174730 48 TTTTTGTTGTTGTTTCTTTGTTTGTTTGTTTTTTTCCAGCACTTTGGA chr4 + 94230402 56598576 56598575 56598623 56598576 56598575 56598623 48 TTTTTGTTGTTGTTCTTTTGTTTGTTTGTTTTTGTTTATCATTAGGGA ..............::.................x.::.x..:.xx... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 99576107 90638448 +3359 chr4 + 190214555 156188538 156188537 156188605 68 GCAACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGCATGACAAGTCAAGAAACTCA chr4 + 94230402 88382708 88382707 88382775 88382708 88382707 88382775 68 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACA ....x:.........xx.x.........::.:..................::x.:xx...x..x.x.. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 67805830 NA +3109 chr4 + 190214555 156241784 156241783 156241842 59 GATCATTTTACTATCTATTTTCTTTTTCTTTTTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72001423 72001422 72001481 72001423 72001422 72001481 59 GACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCT ..:::::..x.:x....:.::..x...:.......................:.::..:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 84240361 NA +3081 chr4 + 190214555 156241801 156241800 156241845 45 TTTTCTTTTTCTTTTTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907966 56907965 56908010 56907966 56907965 56908010 45 TTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ...:..::.:.x.:..........:..............:..... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 99333835 90880720 +3052 chr4 + 190214555 156241802 156241801 156241843 42 TTTCTTTTTCTTTTTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980313 44980312 44980354 44980313 44980312 44980354 42 TTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ..:.........:...:x:.............:......... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 111261489 78953066 +8528 chr4 + 190214555 156298255 156298254 156298573 319 TTGATTATAGTATGTGCATGTGTTTCTGTATGTGTGTGTGTGTTTTCCCCTGTGAGCATGTGGAGATGAGCAGAGT-GTGTGGAATGTGATCTCCAGGAGGGTACCAGAAGCTGGATGTGAGGTTGCTAGGCAATTTTCCCTATTGTTTTAAACAAACTGCACAGGCCTGGCAGCAGCTGTCAGAGTTCCTGGCTCTTAAGAATA--ACAGAGCTGAAAAACACAAAGAACAAAG-TCTTCCACAATAAATGGCAATAAATAACAGGAACTTTCTATGCCAGTAAATGCAGGCACTTGGATGTTAAAGCAATTAATAAGGTTA chr4 + 94230402 22067360 22067359 22067668 22067360 22067359 22067668 309 TTAAGTACAATTTTTGTGTACATTCTTGTCAGTGT------------CCCTTTAAGT-TGTGAGGATATGCAGAGTAGTTAGGAATGCGAGATACTGTAGAGTACCAAGCCTGTGATGTGATGTTGCTAAGCAACATCCTCT-TTGTTTTAAACAAACGGCACAGAGCTGGCAACAGCTGTTAGAGATCTTGGCTTCCGACAGCAGCACAGACCTCAAAAGGACCTAGAGCAAAGAACCTCCAAAATGAGCTGTAGTATAAAAAGCAATCCCATGTTGCTAGTAAATGTGAGAATCTATTTGTTAAGATAGCAGATACTGTTA ..:.x..:.:.x.x..::.:::..::...xx....------------....x.:..:-....::...:x.......-..xx......:..xx.x.x.x..:......::xx:xx.......x.......:....:x.:.:..-...............x......:x......:.......:....x..:.....::::.x.::.--.....x..x....:x..xx...:.....-x.:....x...:.::x.:.:..x.x..x:x:.x.::x:xx...:........:::.x.::.:xx......:::.::x:...xx.... 35M12D10M1D18M1I65M1D62M2I28M1I87M 199/305 65.2% 309/94230402 0.0% 18/305 5.9% 134230895 55983660 +3038 chr4 + 190214555 156381326 156381325 156381388 63 TCCAGCCTGGTGACAGAATAAGACTCCATTTCCAAAAAAAAAAAAAAAAAAGAATTTTTGCTT chr4 + 94230402 53279097 53279096 53279159 53279097 53279096 53279159 63 TCCAGTTTGATGGCAAATTTAGTGTTCTTTGTTAAAAAAAAAAAAAAAAAAGTGTTGTTGCTT .....::..:..:..:.x.x..xx.:.x..x::...................x:..x...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 103102229 87112326 +11463 chr4 + 190214555 156390992 156390991 156391279 288 CAACATTAAAGAAAACGCATGGTAAAGTTGTCAGTGATTCTTGACCAAAAACTAAGACTTCTCTAGATCATGAGAGAACAAGTCAGCTTTCATCATTTTGATCCTGCGTGCAAAAACCAGAAATGAAATATTTGCGGCCATGCAAGATGGCTTTGAAATCAGGAAGCCTTGGCTCACACTATTTCCCAAATTGGCACATTCATTGGAAATGATGTTCAAAGCAACTCACACTAGGAATGGGAAAAGCAGTGTCTGCTTCTCTGAAAGAATATACAACAGCATTTCCCT chr4 + 94230402 22123450 22123449 22123733 22123450 22123449 22123733 284 CAGGATCAAAGAAAATGTGTGCTAAAGCTGACAGTGATCACTGATCAAAACTTCAGTCTTTT-TAGCCTTAAGGTAATTGAGTCTGATTTCATCACCGTAATCCTTAAGGTATAAAATAGGAATTGAACTCGTGGGGTGATGCAAGCTGGCTATGAAATTACGAGGCCTTGGCTCACAAAATACGAAAAGTTGGCATATTCAACGGAAATGATGTTCAAAGTAGTTCACGGTAAGAATGAGAAAAGCAGCTGGTACTGCTCTGGAAGAATA---AACAGCAGTTCTCT ..:x..:........:.::..x.....:..x.......:x:...:.....x:.x..x...:.-...x::xx::.x:.x::....x.x........::x.:.....xx:x.:.x...x:..:...x:..:x:x..x..:x.......x.....x......:.x..:.............xx..x:xxx..:......:.....x:.................:.::....:x..:.....:.........:xxx.:..x.....:.......---.......x...:.. 62M1D208M3D14M 198/284 69.7% 284/94230402 0.0% 4/284 1.4% 134267542 55947013 +3148 chr4 + 190214555 156420040 156420039 156420100 61 TTTTTTTTTTTAGCTTTATTTGTTTTTTTGTTTGTTCGTTTGTTTGTTTTTTGAGATGGAG chr4 + 94230402 29671932 29671931 29671992 29671932 29671931 29671992 61 TTTATTTTTATACACTTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGGGGGGAG ...x.....x..xx:..:...xxx.....x......:................:.:x.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 126748108 63466447 +3145 chr4 + 190214555 156427051 156427050 156427174 124 TTCCTTGGCTCCTGGCTTCTTTCTCCTTCTTCGAAGCACATCACTCCAGCCTGTTTCTGTCATTGCATTTCTCCTTTTCTTCCTAGGTTTTTACCCACTATGTTTTTTCTCGGGCTGTGAGAAT chr4 + 94230402 81811285 81811284 81811408 81811285 81811284 81811408 124 TCCCTTGGCATTTTGCTTCTTGCACCTCCTTTGAAATGTCTCATTTCAGCATATTTCTGTATGTATCATTTTCTCTCATTTTTTAGTGAATTCTTCACTCAGATCTCATCTAAGCTGAAAGAAT .:.......x::.x.......x.x...:...:...::::x...:.:....x.:.......xxx.::xx..:..::.:x:..::...xxxx..x::....xx.x.:.:x:::::....x:..... 124M 71/124 57.3% 124/94230402 0.0% 0/124 0.0% 74615766 NA +5595 chr4 + 190214555 156437540 156437539 156437749 210 TGTATTCTCACTGTTTT----ATTTTGTTTTGTTTTCCTTTAGACACT-----AGAGCTTATTTCCCTCCTTGTTTAAATTGCTTTGCATTCTGGTCATTAATTGGCCAGTGTTGGGGGCTCACCATGTGTTTCACATAAAGTTGCCAGCTTTCTCTGGTGTTATATGACAGCCTCCTTGAAAGCTGAAGACAAGGTGCATACACTTTGTCTAAAAAAA chr4 + 94230402 22149692 22149691 22149909 22149692 22149691 22149909 218 TGTAATTCCACTGACTTCAGTAGCATGATTTCTGCTCCTTGGGAAACTGAAAAAGGACCTGGACTTGCTATTTTTAAAGTTGCTTTTCATTCTTGCTACTAGGTAGGTCGTGACTTTCTCTCACCATGTGTTTCCCATAAAAGCCCTGGCTGCCTTGAGTGCTGTGTGATAGGCTGTCTGGAAGCTAAAGACCAAGTGCATGCACTCTG-CTAGAAAGA ....x.::.....x:..----.x:x..x...x.x:.....x:..x...-----..::.:.:xx:::x::x..x..x..:.......x......x.::.:..:x.:.x:x...x:xxxxx...............x......:x:x.::...x:..:x:...:.:.:...:..x..x::..:.....:.....x.:......:....:..-...:...:. 17M4I27M5I156M1D9M 132/209 63.2% 218/94230402 0.0% 10/209 4.8% 134287848 55926707 +3783 chr4 + 190214555 156443789 156443788 156443885 97 GTGGCACATTCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGTGGGGGTTGTGGTGAGCCAAAATTGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....::..--.x....:.:...........:.........x.xx.x...x.x...........:..x.xx...:...:.------..x..x:..... 8M2D69M6D12M 68/89 76.4% 89/94230402 0.0% 8/89 9.0% 80410588 NA +9305 chr4 + 190214555 156479631 156479630 156479933 303 ACTTAACTATACTGTTGTGTTCCTAATAAAAGAGAAAAATGACATGTTACA--AAGCCA-TAATTACAGGGAGTTTCAGAAGATATATTTGAAAAGG-TCTAGTAGATTAGTACTTAAAATGGTCCAACTTCTGTTGAGTTTGCCTTTAATGTTAGGTTGGATATATTTTCAAAAGCAACACATTAGGTTACCAAGCTTACTGTATTTGATCCAAACAA----TGCCATGTTTATAACATTATTTACTTTGAAGCTCTGAAATTAAAAAAAAAACTATCTTCTTAACAGTGACCTTTTTCGTTTAAGATTT chr4 + 94230402 22165959 22165958 22166243 22165959 22165958 22166243 285 ATCTAATTATACTACTGGGTTCTTAAGGAGACAGAAAAATAGTATGTTACATACAGCTAGTAATTACCAGCAGACTCAGAAGATATATTTGAAAAAGATCTAGTGG-TAACTGCTTAAAATATTGCAGCTCCTGCAGAGTTTGCTTTTAATGTTAGGTTGAGTATATATTCAAACACAGTGCATCTAGTTACCAAG---------TCTGACTTAACTACTAGTTGTCTTGTTTATGATGTTGAGAAATTGAAAGGGGAGAAAATAGCACAA-------CTTCTTG---------TTTTTCATTTTGGATCT .::...:......::..x....:...x:.:.x........:::........--x...:.-.......x:.x..x:....................:.-......:.-.x.x.:........:x.x..:..:...:x........:...............::.....x......x:..:::...:x:.........---------.:...:::..x:.x----..:.x.......:.::..:xxx.x..x:...xxxx....x..:x.x..-------......:---------......:...x:...:. 51M2I6M1I37M1I8M1D89M9D14M4I48M7D7M9D17M 200/277 72.2% 285/94230402 0.0% 34/277 12.3% 134313672 55900883 +3117 chr4 + 190214555 156512004 156512003 156512060 57 AAAAAAAAAAGAACAAAAAGAAAATAAAAGGAAAAAACAAAGAAAGAAAAAAGAAAT chr4 + 94230402 12551687 12551686 12551743 12551687 12551686 12551743 57 AAAAGAAAAAGCACACAGATAAAACAAAAACAAAACACAAAGAAACAAGAAAAAGAT ....:......x...x.:.x....:....:x....x.........x..:...:.:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 143960317 46254238 +5062 chr4 + 190214555 156517914 156517913 156518053 140 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGCAGGAAGGAAAGGGAAAAGCAAAAAAAAGCATTTAACAAAAGAGAA chr4 + 94230402 1500702 1500701 1500838 1500702 1500701 1500838 137 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatgga---aatagaagagga .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:.......::.x:.:...x.:x.x.::....:x:.:.....x.::.x.....:::.....x..:....x.x.---..:.:.....:. 125M3D12M 87/137 63.5% 137/94230402 0.0% 3/137 2.2% 155017212 35197343 +4032 chr4 + 190214555 156517934 156517933 156518063 130 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAAGGAGGGA-------------GGGAGGGAAGCAGGAAGGAAAG-GGAAAAGCAAAAAAAAGCATTTAACAAAAGAGAACTTGAAGAGG chr4 + 94230402 1500702 1500701 1500837 1500702 1500701 1500837 136 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaag--------aaaatggaaatagaagagg .....::.:...:.:x..::.....:.:x..:..:.......:.:::.:x::.::......::.-------------.:.:..:.x:x..........:-......:x....:....--------....x:...x.x....... 64M13I22M1I17M8D19M 83/122 68.0% 136/94230402 0.0% 22/122 18.0% 155017232 35197323 +3081 chr4 + 190214555 156569212 156569211 156569272 61 TCCTCCCAGCTTTGTTAAAGAAGCCAAAACAAAACAAAACAAACAAACAAACAAACAAACA chr4 + 94230402 37548375 37548374 37548435 37548375 37548374 37548435 61 TCCTCTCAGCAGTCTACAGCAGACCAAAAAAAAACAAAACAAACAAACAAAAAAACTTACA .....:....xx.x.xx.:x.::......x.....................x....xx... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 119020837 71193718 +4101 chr4 + 190214555 156584222 156584221 156584342 121 TGGCTACATAAAATGAGAATAGGTAGATCAACACAGCTCAAGTTCTGAAGTGAAATTTTATCTCATTTCTGGCACCGCAAATACTAACCTGATTCTTATCTGTCTAAGAAAAAACATTCCT chr4 + 94230402 22200881 22200880 22200997 22200881 22200880 22200997 117 TGGCTCCATGCACTGGAACCAGACAGA-AATCCAAGCTCTAGTTCTGACATGCAGTTTCAGCTGATTGATGACACTCCAGCTGCTAACCTGATGCTTGTCTG---AGGAAAAATCATTTCT .....x...:x.x..::.x:..::...-x.x.xx.....x........x:..x.:...:.x..x...xx..:...:x..:x.:..........x...:....---.:......x....:.. 27M1D74M3D16M 82/117 70.1% 117/94230402 0.0% 4/117 3.4% 134383341 55831214 +3102 chr4 + 190214555 156585306 156585305 156585351 46 TATATAA-ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792618 24792617 24792664 24792618 24792617 24792664 47 TATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...:...-...................x:........x......... 7M1I39M 42/46 91.3% 47/94230402 0.0% 1/46 2.2% 131792688 58421867 +11587 chr4 + 190214555 156598391 156598390 156598650 260 TTTCAGAAAGTCATGTGAGAGAT-TTAGCTCTGGTACTTAATTTAAACTGTTTATATTTCCTTTACAGTATGCTCCAACCAGCAGCGCGGACCGCAAGTGGAGCCCGGCAATTGGAAAGTTGCAAATGCCTGGATGCTACGTTTTGCATCTTCTTTAGATATCCTTGACTCATACATCCTGTCTGGGCTAATGTT-GTTTTCTGCTTGCAGTGTGTCTGGAGTC--------TCAACAAGTGCCCAAGCCACCCTCAAAGGGTCACTCCT chr4 + 94230402 22205198 22205197 22205452 22205198 22205197 22205452 255 TTTCAGTAAGTCACGTGAGAGATCTTAACTGTTA-ACCAAATCTAAACTATTTTTGTTTCTTTTCCAGTATGCTCTGATCAGCAACACGAACCACAAAGAGTGCCCA--------------GCAGATCCCCAAATACTATGTTTTTCATCTCATTTTCATATCCTTGACTCATGCATCCTGTCTAAGCTAATGTTAGTTTCCTGACTGCAGTGTGTCTGCAGCCCTGGACTGTCAACAAGTGCTGGAGCTATCCCGTAAAGATCACTACT ......x......:.........-...:..x.x:-..:x...:......:...x.:....:...x..........::.:.....:.:..:...:...:x:.x....:--------------...:..x..:::..:...:.....x.....:x...xx...............:..........::.........-....:...x:.............x..:.--------...........:x:...:.:..:xx..:.:.....x.. 23M1I10M1D72M14D74M1I28M8I38M 188/245 76.7% 255/94230402 0.0% 25/245 10.2% 134393193 55821362 +14414 chr4 + 190214555 156643422 156643421 156644060 639 TTTCTGTTCTCATATTTTATCTAACCTCCTAGGTCAAAGATAGTGAGACAAAAAGGAATTGCTCAAATACTGAGATGCATGTCAACTCTTCCAACAACCTCCAGAATTTACTGAGCCTGT--AACACAGCTTTTGTAATCCTTTTCTGTGAAATCCAGTACTGTGTCAGCTTCGTTAGGGTCTAAAGT--GTACCTTTCATAAAGGACCTCAAGATTTATTTTCCTGAGCTTTAAATGAGTGAAAATGTGTTTTGTTGAAACTTCCCAAGAAGTAACTGCATTTTCTATGGAATCTTCCATTGTTTATGGGCCTGATGAAAGCATTTGGCACTTAATGATTCCCAGACTATTTCAACTTTATAAAAAATCAAGAAAAAGAAAAAAAAGGTGAAAAGTAAATGTTTTGAATGCTAACAATAAAATATGTGGATTTTTA--AACCTTACAAAGAAATGAATGCAATGATTTGCTTCAGATGTTA---------TGAAAAATTTTAATGACTG----------TTGACCTGTTCAAATGAGGAAAATGAAACATG---------AGAGAAAGTGA---CTGAGAACAAGATATCCAGGTGGCCCTCTGAAATTCAAGTCTGTTGCTATTAGCCCTGGTTTAATTATCTTCCACTCC-CTCACAGTCAGTTTTCCCATAAA chr4 + 94230402 22211065 22211064 22211698 22211065 22211064 22211698 634 TTTTTCCCTTCATAGGCTATCTATGTTGCTAGGT---------TGAGTAGTAGCTGAACAGCTCTCCCATGCAGACACATTACAGAAGTATAAAATATCACCACCATTTAATGAGACTGGTGAGTATGCCTTTGTTACAGCTTTTGTTTTAAATCCAGTACTGTGGCTGCCTCCTAGGGCCCTGAAGTAAGCACTCTTTAAAAAGAGCGACA-GATTTATT--CCTCCACTCTGAATAAGTGAAAATGTGTTTTGTTGAAACCTCCAGAGA-GTAACTGGCTTTACTATAGAATCCCCTTTTGTTTATGGGCTTGATGAAAACATTTGGCATTTAATGATTCCCAGGCTATTCCAAGTTTA------------AAAAAAAAAAA-------AAAATCAAGTGTGCTGAGTGT------TAAAATGT-----TTTCCACCAACCTCAAAGCAAATTTAATATAAAGACTTGTTTCAGGTATCAAATTAGGGTGGAAATGTTATGCTTACTGACTCCTACTTTTTAGCATTTAGACTCAGTATAATGCCACACGTTGTTCTTAAAACAGCGTGGGGTATGAGGGAGACCTACAGAGGTGGCCACCTGAAATCCAACCATTCTCCTCTCAGCTTTAGCTTTATCATCTGCTGCTCCTCACATCTTCAATTTCTTCACAAA ...:.x:::.....xx:......xx:.x......---------....xx:x.:xx...:x....xxx:.:xx...::...xx..:xxx.x:x..xx.:.x...xx.....x....x...x--.::.::x....xx..xxx.....x.x.x...............x.x..:..x.x:..x:..:....--.:..::..:.x....::.xx..-........--...xx:..:.:...:........................:...x:...-.......xx...x....:.....::.:x............:........:.........:..............:.....:...x....------------.....:.....-------....x:..:...x:...:..:------......:.-----...::.--.....:.x.:x:..x.x...::..x..:...:.....:.:.:.---------x....x:..x.:x.x....----------..x.x.xx..x:.x.x..x.x....xx...:.---------.:.x.:x...:---x....::x:.xx..:xx........x:.......:...x:x.x:.x..x.:...::.:.:..x..:....x.::....-.x..:xx...:...:::..:... 34M9D77M2I66M2I22M1D8M2D48M1D89M12D11M7D21M6D8M5D6M2I43M9I19M10I32M9I11M3I78M1I23M 404/596 67.8% 634/94230402 0.0% 81/596 13.6% 134432357 55782198 +15090 chr4 + 190214555 156685512 156685511 156686555 1044 TGATTAATCAGCAGTGACCATGATTTGTTTTTAAAGAATTTCTCTTTGAAATGTACCTTGATCTTGATATATCACTTTAAGTTGATCTA-TACAGGAAAACCTGGCACCAAAAGCTGCAACTGCTTTGAGGGGAGCTTTATGTGATTATTAGATTTCAAAGCCACTAAGCTTTTGCTAATCTTCCACATAAGAGATCTAAACATGATTGTTTATGAAAACTTCCCTCTTCCTGTAAAGTTTCCTCCCTACTCACCTTCCATTTTCTCTAATACCATCTAAATAGCATGCATTGATTTTCTTTGTTTCAGA---AGTTTTTAGCAATCTGACATCCATT-TAT--TTGAAGCAATTCACATACCTACAACGTGAAAGACTGGGTAGTAACCTGCTAAG--CATGCAGGCATGAGAAAGCACAT----CTCCTCTAAACATTTAAAAGTCAGAATTTCTACGAAAG--------------TCACAAGTCTTCAATAAATTTTTCCATAGCATTTGACTATTTCTAGAGCACAGTAAGAAGCATGATAC----TTTCCTTTTTAAAGCACTGACATTTATTACTTTGCACAAACTGAATGTTTGAGATCCAGAAGACCACTGCAGATACAGTAGAAAAATCAATTGCTTTTCTTA--------------TTGCTTTAATAAAAGCTGTAGAAATTCTTTATACTTAACATGTGTACAACTAAAGAGAATGTGTGT-GTGTGTGTGTGTGTGTGTGTGTGTAAATGAGAGCTCCAGCTGCCCTTAGCTTGAAGGAATCTCCATGTCATCAGCAGACAGGAATTATATTTCATTCACCC-TTTTGCCATGGT-AAAGGAGTCAACAAGATCCAGATGGTTGTTCTGCGTGTTAAAGCGAGTCTGCTTTGTAATCGTTGTCTGAGATCCAAGCCCTTGCTTTATAGTGCTTAAATAATTGATTTCACCCAGTCTTCAGTCAGAGCTAGAAAACTCCA-AATATGTTCCCATTAATCCTCAGAGTAAGGAACTGCTGATGGTGCTCAGTAGT--TTCAAAATTCATGGCTTCATGGGAAATCATACCATTTA---------CAAAGAAATC chr4 + 94230402 22217730 22217729 22218733 22217730 22217729 22218733 1004 TGATCCATCAGCAGTGCTTGGCGTTCATTCCCAAGGGAAATC-CTTTGAAATGTACCTTCATCTTGATCACTGACCTCAAGCTGGTCCAATACCACAAGCACCAGTGCAAAGAGCTGCAGCTGCTTTGTGCAGAACTTTATCTGATTACTAGATTTCAAAGCAACTAAATCCAGTCTAATCCACCACATAAATCAGTCAAAC--TATTTTTAATGCAAGTT----CTTTCTTTTAAAA---CATAACAAGTGGCCTAAAATTCAGACTAAAATT-------TAGCATAGCTT--TTTTTTCTGTCCCAGAACCAGCCTACTACAGTTTATTGATCATTGTATCATTGAAGCTTATATCATATTAAGAATATTA---------TAATAAAACATTAAAACCACTTAGGAA-AAGCAAACATATACAGATCAAAGAAAAAGTTATGAATACAGATAACCACAAAAGATGAAAATAAAACAGCTTAAGCTATTTATAAGTAATTGCCAATTATTTATTTATTC--------------------TGATACAAATATATCCCATTAGAACATCAACATTTTCTATTTTGCTTAAAATAATCACT---AACAAAGAAGTCTGA-------ACATGAAAATAATTCGTTCATCTACTCAATTTGACACAGAAGTCACTTTAGAGTAAGCTCTGTCAATTCTTTTTAAAAAACACAT--------------AATATCTGTAACATACGTATATATATACTTATG-GATTGGGATCTCCAGCTGCCATGAGACTGAAGAAATGCTTATGAACTCAGAAAGCAGGAATTGTATTTCATTCACCCTTTTTGCCATGGTAAAAAAAGTCAACATGATCCAGA----TGTTCCAGGTGTTAAAGAATGCCTACTTGGTAACTACTGTCCAAGACACAAGGTTTATCTTTATAGTGCTGAAATAATGTATTTAATCCAG---------------AGATAATACAGCAGCCTTCTTCCATTACTCTTCAGAGTGGAGAAC-----ACGGT--TTAACACTTCTTCACATTTTGGTAATTTAAATGAAGTCACATTATTTATCTAATGGCCAAACAAATC ....:x..........x:::xx:..::..:::..:.:.xx..-................x........xxx.x..:.:...:..:..:.-...x:x..:xx.::.::.x..:.......:........x.x:..:......x......:.............x.....::::xxx......:x........:xx.x::....--x...x..x...x..::.----::...:.x....:---.x.xx.x.x.x:...xxx...:xxx....x.::-------......:xx..--....:.:...::....---..::.x:x:..:.:.:x::x:....-...--.......xxx.xx....::x.x..::.x.---------..:...xx:::...:--..:x:...x.-:..x..:..:..----x..xxxx...x.x...x:.:.xx::..xx.:..:....--------------x.x:...::x.:x....:.xx..x.xx.x:....:x:....:--------------------......----x.x:.::x...:.:..:::......x:..:.....x:...x.:.x:::.---:.:xx.....x.::x-------...xx.:..x...:x:..xx.:.x..:.--------------.::.....:x:x.....x.:xx........x..xxx....::.--------------...:.x...-:::.::..:.:.:.:.::x.:..-:.x..:..x...........x.x..x:.....:...x:::...xxx....x.::........:..............-............-...::........x........----.....::x.........x:x.:..:...x....::::....::...:x....x::.xx............x.......xx....x.:....---------------...x..:x.x:-.::x.x:.:......x..:.......:::....-----.:...--.:.::.x.--....x.x..::xx:x..:.x:x...:...:.::.....---------....x..... 42M1D46M1I112M2D17M4D13M3D33M7D11M2D16M3I25M1I3M2I29M9D15M2I10M1D12M4I38M14I42M20D6M4I49M3D15M7D28M14I43M14D9M1I23M1D77M1I12M1I22M4D91M15D11M1I33M5D5M2D8M2I38M9I10M 606/944 64.2% 1004/94230402 0.0% 160/944 16.9% 134467782 55746773 +3336 chr4 + 190214555 156690423 156690422 156690485 63 CCTGGGCAAAAGAGTGAGACTCTGTCAAAAAAAAAAA--AAAAAAAAAAAAAAAAAAACTAAGAC chr4 + 94230402 44082651 44082650 44082715 44082651 44082650 44082715 65 CCAGTGCAGAAGGGTGGGTTTCTGTCAAAAAAAACAAACAAACAAAACAAAAAAAAAACTTGGAC ..x.x...:...:...:.x:..............x..--...x....x............x:... 37M2I26M 51/63 81.0% 65/94230402 0.0% 2/63 3.2% 112607772 77606783 +3411 chr4 + 190214555 156698474 156698473 156698563 90 GATATGCCTGTAGTCTCAGCTACTTGGGAGGTTGAGGCAGGAGGATCCCTTGATCCAAGGAGTTTGAGGCTGTAGTGAGGTATGATATCA chr4 + 94230402 76033203 76033202 76033289 76033203 76033202 76033289 87 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA .:.:::.x......::..........::...:....x.xx.x.:.x.x.....x..x..:..:..x:........---:::.....::.. 75M3D12M 59/87 67.8% 87/94230402 0.0% 3/87 3.4% 80665271 NA +3110 chr4 + 190214555 156704665 156704664 156704740 76 GGGGCACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATAGCTTGTACCCAAGAGGAGGGGGTTACAGA chr4 + 94230402 76033203 76033202 76033278 76033203 76033202 76033278 76 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..x....x....:.:...........::...:....x.xx.x...xx:....x.....::..xxxx...:.::... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 80671462 NA +3093 chr4 + 190214555 156747662 156747661 156747732 71 GATGGCAGGCAG----GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033190 76033189 76033264 76033190 76033189 76033264 75 GATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....::.x:...----....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 12M4I59M 52/71 73.2% 75/94230402 0.0% 4/71 5.6% 80714472 NA +3127 chr4 + 190214555 156777976 156777975 156778055 80 CGCTTATAATCCCAGCTACTTGGGAGGCTGAGGGACAAGAATCACTTGAACCCAGGAGGCGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033207 76033206 76033291 76033207 76033206 76033291 85 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG .:.x.:..:.:...........::........xxx::x...x.............:..x:xx:..:..:.----....-...... 70M4I4M1I6M 58/80 72.5% 85/94230402 0.0% 5/80 6.2% 80744769 NA +3118 chr4 + 190214555 156794462 156794461 156794548 87 TAGGGAAGCATTTAAGAAGAGAAAGAAAAATAAGAATGAAAGAGAAGAAGGAAGAAAAAAGAAGGGAGGGAGGAAGGAAGACAGGAA chr4 + 94230402 58935743 58935742 58935825 58935743 58935742 58935825 83 TAAGGAAAAAT----GAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAATTGTGCAGGAA ..:....:x..----......:...:..........x.x..::.......:..x..x:x.:::.::.::......:xx:x:...... 11M4D72M 56/83 67.5% 83/94230402 0.0% 4/83 4.8% 97858719 92355836 +3335 chr4 + 190214555 156797693 156797692 156797752 60 ATTGAAAGCCGTCCTGGGCCACATGGGGCCCGCGAGCCATGGGTTGGACAAGCTTGGAGT chr4 + 94230402 45575690 45575689 45575749 45575690 45575689 45575749 60 ATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGCAGT ....x....:..x.......x....x..:.:.:.:::...........:.x..:..x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 111222003 78992552 +3195 chr4 + 190214555 156824294 156824293 156824366 73 ATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------CACATATACACACATATATA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------:....:x.:.x.:....... 53M11I20M 53/73 72.6% 84/94230402 0.0% 11/73 15.1% 133576572 56637983 +3036 chr4 + 190214555 156824309 156824308 156824348 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 152415227 37799328 +3005 chr4 + 190214555 156824311 156824310 156824351 41 TATATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.............:.........x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 152415229 37799326 +3106 chr4 + 190214555 156827288 156827287 156827359 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAATGTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...x.:......:x::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 80794082 NA +3373 chr4 + 190214555 156863984 156863983 156864043 60 GTTTGTTTCTTGTTTTTTTTGTTGTTGTTGTTTTGGTTTGGTTTAGTTCATTTGTTTGTT chr4 + 94230402 78757607 78757606 78757666 78757607 78757606 78757666 60 GTTTTTTTTTAGATTTTTTTGTTGTTGTTGTTCTGCTTTGTTTAAATTGATTTGTGTGCT ....x...:.x.x...................:..x....x..x.:..x......x..:. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 78106377 NA +3313 chr4 + 190214555 156863988 156863987 156864044 57 GTTTCTTGTTTTTTT--TGTTGTTGTTGTTTTGGTTTGGTTTAGTTCATTTGTTTGTTT chr4 + 94230402 79226630 79226629 79226688 79226630 79226629 79226688 59 GTTTTTTGGTGTTTTGTTGTTGTTGTTGTTTTGGTTTGGTTTTGGTTGGTTGTTTATTT ....:...x.x....--.........................x.x.::x......:... 15M2I42M 48/57 84.2% 59/94230402 0.0% 2/57 3.5% 77637358 NA +3138 chr4 + 190214555 156891264 156891263 156891355 92 AGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAATACAGTGTTATTATCCTA--TGGGA chr4 + 94230402 1046802 1046801 1046895 1046802 1046801 1046895 94 AACGACACCTTAATTCAAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAAATCGTTTTCATTTTAGGTGGGA .:...x..::::x:......:.:.x.xx.......:......:........xx:.::..::...::...x.x.x:...x.:..::..--..... 87M2I5M 60/92 65.2% 94/94230402 0.0% 2/92 2.2% 155844462 34370093 +3000 chr4 + 190214555 156921474 156921473 156921538 65 CTAAAAGGAGGAGGAGAAGGAGAAAGGAAAGGAAACAAAAGAAAAAAAAGAAAATTAGAAAGAGA chr4 + 94230402 18133179 18133178 18133243 18133179 18133178 18133243 65 CTCAGAGGGGGAGGGGAAGGTGGGGAGAAAGAGAAAAAGAAAAAACAAGCAAATTTCAAAAGAGA ..x.:...:.....:.....x.::::.....::..x..:.:....x..:x...x..x:....... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 138788295 51426260 +3544 chr4 + 190214555 156960443 156960442 156960561 119 AGACATATATACACACACACGTGTGTGTGTGTATATCTATATATGTGTGTGTTCTTTTTCATTTATAGCTCCAGAAATAGTGAACTTTTGTTTAGAAATAAAAGTAAAGTCAATAATAA chr4 + 94230402 18734807 18734806 18734922 18734807 18734806 18734922 116 AGACATGTACACACACACACATATGTATACATGTATTCATTTGAATCTGTGTTC--TTTCCTTCTGGACTCTGGCAATTGTG-ATTTGTGTCTGGAAGGATGAATTACCTAAAAAATAA ......:..:..........:.:...:.:::.:...::..x.:x:.x.......--....x..:xx::...::.x...x...-.:..x...:.:...:x.x:.:.x.xx.x..x..... 54M2D26M1D36M 76/116 65.5% 116/94230402 0.0% 3/116 2.6% 138225636 51988919 +3102 chr4 + 190214555 156985235 156985234 156985286 52 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATGTATA chr4 + 94230402 1494994 1494993 1495045 1494994 1494993 1495045 52 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATA ...:::...x.:.........x.:...............:.:..:..::... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 155490241 34724314 +3085 chr4 + 190214555 157033030 157033029 157033064 35 TCTCTCTCTCTCTCTCTCACATACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA .....................:..:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 144431725 45782830 +3207 chr4 + 190214555 157033030 157033029 157033064 35 TCTCTCTCTCTCTCTCTCACATACACACACACACA chr4 + 94230402 75248054 75248053 75248088 75248054 75248053 75248088 35 TCTCTCTCTCTCTCTCTCACACACACACACACACa .....................:............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 81784976 NA +3114 chr4 + 190214555 157033395 157033394 157033440 46 GCGAAAGAGCAAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382708 88382707 88382753 88382708 88382707 88382753 46 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAA ..:..:.........xx.:.........::.:.............. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 68650687 NA +3003 chr4 + 190214555 157033419 157033418 157033466 48 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:......x........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 155538419 34676136 +3126 chr4 + 190214555 157033421 157033420 157033467 47 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495046 1495000 1494999 1495046 47 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATAT ...x.:.........x.:...............:.:..:...:.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 155538421 34676134 +7789 chr4 + 190214555 157035573 157035572 157035964 392 GAATTGCCAGGAATAAGAACACTGATGATAGAAATGGCACCAGAGAAGTCATTGCTATTCTTGGCCACAGACATTTCCAGTCTGAACAATAGC-TGTTTTCTTCATAGCTTTCACCAATGTCATATTTTA-AGCAGGGATTTTGTGAGCTCAACAAATGAATGGAAAAAGGCTGCAAAATATGTTGCAGGAATCTCTTGCAGGTAAGCAGGAAATTTGGAATAGATTATCAGGACAGAAAGTTTTATACAGAGATGGCTAGGACAAAAGACAAAATAAAACTG-CTGAAGTAGGCTTTAAAATGCAGTG-------TGATTCAATCAGCAGCACAGGCACTATTGTCC-CAGCTGACTTGGTATCCATTTTG-ATATGGGGAATAAAAGGAGTAAGATCAGAAG chr4 + 94230402 22408260 22408259 22408638 22408260 22408259 22408638 379 GAATAGGAAGGAGTGTGAATGTGGGTGACAGAAATGGCAGCAGAGGACACTTTGTTGTTCTTGGCCTCAGCCACTTCCAGGCTGAACAATAGCTTGTTTTCTTCCTTCGTTTCACAACCGACAACTCTCAGAGCAGGAATTTCATTA-TACTTCAGATGGGTGGAAAA--GCTATAA--------TCAAATGCCTGTGGCAGGTAGACAGGAAGTCTGCAATAGGCTTTTAAAGCACGAGAAGCAAGA-AAAGACCTTGAAGTTTAAAGAAAAACAAAACCTATCTGAAATGCTTTTTAAGGAGCACTGCCTACTACAGCTCAATCA-----------ACCATCACCTGCCGATGGCTCTGCAGCCCTGCTGTACATGGGGAGAAGAATGAG--AAGTCAGAAG ....x.xx....:.:x...:::x.:...:..........x.....:.xx.x...:.:.........x...x..:......x............-..........x.xxx......x.x:.x..xx.:.:.-......:....::.x.-:x.xx..:...::.......--...::..--------x..::x::..x.x.......::......:.:..x.....::.x.:.:::..x:.::xx:x.x.-.:...:xx:x.:.x:x.....x...xx...x..:-.....:.:xx:.....::x...x..-------::::.......-----------..:..:::.:-.x.x..:..:x.:.x..x.x:..-.:.......:x.:..x...--.::....... 93M1I36M1I16M1D20M2D7M8D63M1D34M1I25M7I11M11D10M1I23M1I19M2D10M 240/367 65.4% 379/94230402 0.0% 37/367 10.1% 134627313 55587242 +3243 chr4 + 190214555 157061948 157061947 157062038 91 GCACCTGGGATCTCAGCTACTTGGTAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATTGTGCCAA chr4 + 94230402 76033206 76033205 76033290 76033206 76033205 76033290 85 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ....x..x::.::..........:x........x.xx.x...x::...........:..x.xx:..:..:..------..x..x:...... 72M6D13M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% 81028742 NA +10316 chr4 + 190214555 157077961 157077960 157078177 217 CATAAATGTAAACATTTTCTTGTTCTCTCTTGTAGATCGA----TCTTCTGAAATTCAAGTTTTCAAGATGAAGTTTTTATTGACAACTGCCTTTTTAATTTTAATTTCCTTGTGGGTGGAAGAAGCCTATTCTAAGGAAAAGTCTTCAAAGAAAGGGAAGGGGAAAAAGAAGCAGTATCTATGCCCATCGTATGTTCTTCATGTC--TTATATTCTTATATG chr4 + 94230402 22432848 22432847 22433064 22432848 22432847 22433064 217 CATAAACCTATTTATTTTCTT-----TTCCTGTAGACCAAATATTTCTCTGAACTTTAA-TCTTCAAGATGAAGATCCTGCTAGCGATCTTCTTCTTTGTCTCATTCTCCTTATGGGTGGAAGAAGTCTATTCCAAAGAGAAGTCGTCAAAGAAAGGAAAGGGAAAAAAGAAGCAATACCTCTGTCCATCGTATGTTCCACATTTCCTTTATATTCTTGCTTG ......:x..xx:........-----:..:......:.:.----.::......x..:..-.:............x.::.::.::.:.::x:...:..x:.:.:.x.:.....:.............:......:..:..:.....x...........:.....:...........:..:..x..:.............:x...x..--..........::x.. 21M5D14M4I15M1D146M2I15M 160/211 75.8% 217/94230402 0.0% 12/211 5.7% 134645113 55569442 +3249 chr4 + 190214555 157093615 157093614 157093697 83 CGTGGTGGCACATGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--.x....:...........::........x.xx:x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 81060418 NA +3003 chr4 + 190214555 157107007 157107006 157107087 81 TTTCAATCTTATGATTATTATTGTATCTGTTAGAGTGATTTGTGATCAATGAACTTTGGTGTTACTGTTGTAATTGTTTTG chr4 + 94230402 30015992 30015991 30016072 30015992 30015991 30016072 81 TTCAAATCTCACGTTGATCATTGTCTCTGTTAGAGTGATTAGTGACCTGTGAGACTGGGGACAAGTGGGATAGATATTTTG ..:x.....:.:.x.x..:.....x...............x....:.x:...:x:.x..x::x.x..xx:..:x.:..... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 127091015 63123540 +3255 chr4 + 190214555 157114328 157114327 157114392 65 TCTCTCTCTCTTTCTTTTTTTTTTTTCAAATAAACATTTTATTTTAGAATAGCTTTAT-AGAGTTA chr4 + 94230402 10659703 10659702 10659768 10659703 10659702 10659768 66 TCTCTCTCTCTCTCTCTCTTTTTTTTTTAACGATAACTTCATTTAAAAATGGTTTTGTAAGAGTTA ...........:...:.:........:x..::.xx.:..:....x.:...:.:...:.-....... 58M1I7M 49/65 75.4% 66/94230402 0.0% 1/65 1.5% 146454625 43759930 +8776 chr4 + 190214555 157120543 157120542 157120790 248 CTCTCTCTTATAGTCAGCAGTCAGCAGAGGACCTTGCCCGAGTACCTGCCAACTCCACTAGCAATATCTTGAACAGGTTATTGGTCAGTTATGATCCCAGGATAAGACCAAACTTCAAAGGTTTGTCTCCCCCATATAAATGTT----CATTTTTATTG----TTTAAAAATTAA--------TTTTATATGTTTAGAGATTTGTGATATTTTATATGTATATGCTTTGTGATATTCAAAACAGTA-AGATTTCAAAGTGATATA chr4 + 94230402 22443365 22443364 22443603 22443365 22443364 22443603 239 CTTCTTTTTACAGCCAGCAATCAGCTGAAGACCTTGCAAGAGTACCTGCTAATTCTACCAGCAACATCTTGAATAGGCTATTACTCAGCTATGATCCCAGGATAAGACCTAATTTCAAAGGTTTGTC----------AGATGTTTCTGCCTTTTTATTTGATCCTTGTAATTTAACTTCTGTTCTTTTCATGCACAGAAAGTT-----------TATGTAGA-----AGTAATATTCACAACTATATTTATTTCTAAGAGAGATA ..:::.:...:..:.....:.....x..:........xx..........:..:..:..:.....:........:...:....:x....:....................x..:..............----------.:.....----.x........x----:..:x..x....--------:...x:...:x:...:.x..-----------......x.-----x..:.......x...x:..-xx.....x...x..x... 127M10D7M4I11M4I12M8I20M11D8M5D19M1I18M 173/222 77.9% 239/94230402 0.0% 43/222 19.4% 134677178 55537377 +6102 chr4 + 190214555 157122317 157122316 157122419 103 TTTTTATTCATAGGCATTCCTGTTGATGTAGTAGTCAACATTTTTATTAACAGTTTTGGATCCATTCAAGAAACAACAATGGTAAGATTGCAATTAATTTAAT chr4 + 94230402 22445895 22445894 22445997 22445895 22445894 22445997 103 TTTTTTTTTAAAGGGATTCCAGTCGATGTGGCAGTCAATATCTTCATTAACAGCTTTGGGTCAATTCAAGAGACAACTATGGTAAGACTGAAACGAACTGAAT .....x..:.x...x.....x..:.....:.:......:..:..:........:.....:..x........:.....x.........:..x..:x..:.x... 103M 81/103 78.6% 103/94230402 0.0% 0/103 0.0% 134676422 55538133 +4110 chr4 + 190214555 157125808 157125807 157125909 102 CATGGTGGTGCACACCAGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCACTTGAATCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCATGCCAA chr4 + 94230402 76033197 76033196 76033290 76033197 76033196 76033290 94 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCAA ..::.........::--...:.:...........::........x.:x.x...x........:....:..x.xx:..:..:..------:.x..x....... 15M2D66M6D13M 70/94 74.5% 94/94230402 0.0% 8/94 8.5% 81092611 NA +7768 chr4 + 190214555 157136448 157136447 157136904 457 ACGCATGTACTTTTTCTTCAGGACTATAGAGTTAACATCTTCCTGAGACAAAAATGGAATGACCCCAGGCTGA---------AGCTCCCCAGTGATTTTAGGGGTTCAGATGCACTGACAGTGGATCCAACAATGTACAAGTGTTTATGGAAACCTGATTTATTTTTTGCAAATGAAAAAAGTGCCAATTTTCATGATGTGACCCAGGAAAACATCCTCCTCTTTATTTTTCGTGATGGAGATGTCCTTGTCAGCATGAGGTACT----CTTTTATATTTCATATTTGTGCATTTATATTTTCCTTCTAAAATCAATGGATGACAGAGAAGTATATTAAATTATTTCTAAGACCCATTT--CTGCTTCC---AGGTTATCTATTACTCTTTCATGCCCTTTGGACTTGACATTGTTTCCCATGGATACACAACGTTGCAAGATGCAACTGGAGAGCTGTACGTAAATGAGAACAT chr4 + 94230402 1991697 1991696 1992139 1991697 1991696 1992139 443 ACGCAGTGCCCTCTGCCCCAGGACTACCGTGTGAACGTCTTCCTGCGGCAGCAGTGGAACGACCCCCGGCTGGCTTACCGGGAGTACCCCGACGACT---------------CGCTCGACCTCGACCCCTCCATGCTCGACTCCATCTGGAAGCCGGATTTGTTCTTTGCCAATGAGAAAGGGGCCAACTTCCACGAGGTCACCACTGACAACAAACTGCTGCGCATCTTCAAGAACGGCAACGTGCTCTACAGCATCAGGTGCTGAGCCCTTCTCCTCTGGGGAAAGCGCA---GGGCTTTCCTCTTTGATCCCGTTGG----------GCATCTTTCAGTGATTCT----CTCTTTTGTCCGCCTCCTGCAGGCTGACGCTGATCCTGTCCTGCCCTATGGATCTCAAGAACTTCCCCATGGACATCCAGACGTGCACGATGCAGCTGGAGAGTTGTGAGTGCCTGGGGACGT .....xxxx.:.:.x.::........:x.x..x...:........x.:..:x.:.....:......x.....:---------..:x....:::..:.---------------.:..x:xxx.x..:..xx.x...:x.:.x.x:x.x.....:..x.....:..:.....x.....:...:.x.....:..:..:..x..x...xxx..x....xx..x..x:x:..:..:x:x:.:..x:.:..x..:xx......x....:..----.:..:x:x.:.x:x:xxx.:...---:x::......::.x:.x:.x:.x.:----------.:..x..xx.x.:x....----.:.x...--.:..:...---...:.:x.xx.x.::..x..x......x....::.x.x:xxx..:........:.:x..:xxx....x......:........:...:x..:xx..:.:..:. 73M9I15M15D153M4I23M3D25M10D18M4D7M2I8M3I103M 261/425 61.4% 443/94230402 0.0% 50/425 11.8% 155144751 35069804 +16513 chr4 + 190214555 157136452 157136451 157136770 319 ATGTACTTTTTCT-TCAGGACTATAGAGTTAACATCTTCCTGAGACAAAAATGGAATGACCCCAGGCTGAAGCTCCCCAGTGATTTTAGGGGTTCAGATGCACTGACAGTGGATCCAACAATGTACAAGTGTTTATGGAAACCTGATTTATTTTTTGCAAATGAAAAAAGTGCCAATTTTCATGATGTGACCCAGGAAAACATCCTCCTCTTTATTTTTCGTGATGGAGATGTCCTTGTCAGCATGAGGTACTCTTTTATATTTCATATTTGTGCATTTATATTTTCCTT--CTAAAATCAATGGATGAC------AGAGAAGTATAT chr4 + 94230402 22452366 22452365 22452681 22452366 22452365 22452681 316 ACGTATTCTTCCCATCAGGATTACAGAGTAAACATCTTTCTAAGACAGAAGTGGAATGACCCCAGACTCAAACTGCCCAACGACTGGAGGGGTTCAGACACTCTGACAGTGGACCCAACAATGTTTAAATGTCTTTGGAAGCCGGACTTGTTCTTTGCAAATGAAAAAAATGCTAACTTCCATGATGTCACTCAAGAAAATATCCTTCTTTTTATATTTCGAGATGGAGATGTCCTAGTCAGCATGAGGTATTT------------TATTGATAAATTCATACTCTTTCTGACTTTAGTCAATTCATGACTTGATGGGAGATGTATAT .:...:.:..:.:-......:..:.....x........:..:.....:..:..............:..x..:..x....::..:.xx...........::.x...........:..........x:..:...:.x.....:..x..:..:..:................:...:..:..:........x..:..:.....:.....:..:.....x.....x..............x..............:.:------------....x:.:x...:...:.:.:::.--..xx.:.....xx.....------:....x...... 13M1I240M12D24M2I18M6I12M 240/307 78.2% 316/94230402 0.0% 21/307 6.8% 134684086 55530469 +8103 chr4 + 190214555 157136776 157136775 157136917 142 TATTTCTAAGACCCATTTCTGC--TTCCAGGTTATCTATTACTCTTTCATGCCCTTTGGACTTGACATTGTTTCCCATGGATACACAACGTTGCAAGATGCAACTGGAGAGCTGTACGTAA------------ATGAGAACATAATTGATTATGAA chr4 + 94230402 22454077 22454076 22454232 22454077 22454076 22454232 156 TATTTTTAAATTCTATTTCTGTATTTTTAGATTGTCCATTACTCTGTCGTGCCCTTTGGACTTGACCTTATTTCCTATGGATACACAGCGCTGCAAGATGCAATTGGAAAGCTGTATGTAAATTCATCTTTGCATAAAAACACATTTTGTAATGAA .....:...:x:.:.......:--..::..:..:..:........x..:.................x..:.....:...........:..:............:....:.......:....------------..:.:....:.x..x:.x..... 22M2I97M12I23M 114/142 80.3% 156/94230402 0.0% 14/142 9.9% 134682699 55531856 +12200 chr4 + 190214555 157138784 157138783 157138960 177 AACATTTATTTGTTTTTGTTTATAGTTGGTTACACAACTGATGATTTACGATTTATCTGGCAGTCAGGAGATCCTGTGCAATTAGAAAAAATTGCCTTGCCTCAATTTGATATCAAAAAGGAAGATATTGAATATGGTAACTGTACAAAATACTATAAAGGCACGGGTAAGTAATAT chr4 + 94230402 22456909 22456908 22457085 22456909 22456908 22457085 177 AATAATTATTATTTTGTTCTTGTAGTTGGTTACACAACTGATGACTTACGCTTTATCTGGCAATCTGGAGATCCAGTACAGTTAGAGAAAATTGCTCTGCCTCAGTTTGATATTAAAAAGGAGGATATCGAATATGGTAACTGTACCAAGTATTACAAAGGCACAGGTAGGTGATAT ..:.x.....xx...x.x:..:......................:.....x...........:..x........x..:..:.....:........::.......:........:........:.....:.................x..:..:..:........:....:..:.... 177M 148/177 83.6% 177/94230402 0.0% 0/177 0.0% 134681875 55532680 +3019 chr4 + 190214555 157142655 157142654 157142737 83 TAAATATTGTTTTTAAACTGTAAAATAGGAAAAAGTAACATTATTCTTTCCCCCATAATTGTTTCATTTATTTATTGTTCATT chr4 + 94230402 5751942 5751941 5752024 5751942 5751941 5752024 83 TAAAAGCAGTTATTAGAATGTCAAAAAATGAAAAAAAGTATTTTTTTTTTCCCCATAATTGCTCTGTTTGTTTTTCTCTCTTT ....x::x...x...:.x...x...x.:x:....:x.::...x..:...:...........:.:::...:...x.:x:..x.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 151390713 38823842 +10336 chr4 + 190214555 157143788 157143787 157143963 176 ATGTGTTTGCTTCTG-AAAGGCTACTACACATGCGTGGAAGTCATCTTCACCCTGAGGAGGCAGGTCGGCTTTTACATGATGGGGGTCTACGCCCCAACTCTGCTCATTGTTGTTCTCTCCTGGCTTTCCTTCTGGATCAACCCGGACGCGAGTGCTGCCAGAGTGCCCCTGGGTAA chr4 + 94230402 22460354 22460353 22460530 22460354 22460353 22460530 177 ATGCATTTATTTCTTTAAAGGTTATTACACTTGTGTAGAAGTAATCTTCACTTTAAGAAGACAAGTTGGATTTTACATGATGGGTGTTTATGCTCCTACACTGCTAATTGTTGTTCTGTCCTGGCTATCATTTTGGATCAATCCTGATGCAAGTGCTGCAAGAGTCCCACTGGGTAA ...::...::....x-.....:..:.....x..:..:.....x........::.:..:..:..:..:..x..............x..:..:..:..x..x.....x...........x........x..x..:........:..x..:..:........x.....x..x........ 15M1I161M 139/176 79.0% 177/94230402 0.0% 1/176 0.6% 134683434 55531121 +6099 chr4 + 190214555 157143805 157143804 157143962 158 AGGCTACTACACATGCGTGGAAGTCATCTTCACCCTGAGGAGGCAGGTCGGCTTTTACATGATGGGGGTCTACGCCCCAACTCTGCTCATTGTTGTTCTCTCCTGGCTTTCCTTCTGGATCAACCCGGACGCGAGTGCTGCCAGAGTGCCCCTGGGTA chr4 + 94230402 1992520 1992519 1992677 1992520 1992519 1992677 158 AGGCAAGTTCACCTGCATTGAGGTGAAGTTCCACTTGGAGCGGCAGATGGGCTATTACCTGATCCAGATGTACATCCCCAGCCTGCTCATCGTCATCCTCTCCTGGGTCTCCTTCTGGATCAACATGGACGCAGCGCCGGCGCGGGTGGGCTTGGGCA ....x.x.x...x...:.x..:..x.xx...xx.:..::.x.....:.x....x....x....xx:.:.x...::...x.x:........:..::.:.........x.:...............x:......::xxx.x..xx.:...xx.:....:. 158M 107/158 67.7% 158/94230402 0.0% 0/158 0.0% 155151285 35063270 +3711 chr4 + 190214555 157143822 157143821 157143964 143 TGGAAGTCATCTTCACCCTGAGGAGGCAGGTCGGCTTTTACATGATGGGGGTCTACGCCCCAACTCTGCTCATTGTTGTTCTCTCCTGGCTTTCCTTCTGGATCAACCCGGACGCGAGTGCTGCCAGAGTGCCCCTGGGTAAG chr4 + 94230402 10947880 10947879 10948022 10947880 10947879 10948022 143 TGACGGTTTCCTTTGACTTAAGTAGACGTATGGGTTATTTTGCCATTCAGACCTACATTCCCTGCATCCTGACTGTTGTTCTGTCCTGGGTTTCCTTCTGGATCAAGAGAGACTCTACACCAGCCAGGACATCCCTCGGTAAG ..:x:..:x:...::x.:.:..x..:.:x:.x..:.x..x:::x..xx:.::....:::..xxx:x.x..x.:.........x......x................xxx:...x.x.xxx.x.....:::::....x...... 143M 85/143 59.4% 143/94230402 0.0% 0/143 0.0% 146195942 44018613 +3135 chr4 + 190214555 157149816 157149815 157149927 112 TGCCTTCCATTTCTTTTCTTTTCCTTTCTTTCTTCCTCTCTTTTCTTTCCTTATTTTTTCTTCTCTTTTCTTTTTCTAGTTTTCAATTTTTCTCTTTTCACCAATACATTCC chr4 + 94230402 89201220 89201219 89201330 89201220 89201219 89201330 111 TGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTA-ACATCCC ...:..:x::.x:..............:....:.::xxx..x.x....:...:..xx::::....::..:.....:.x:.x::.xx::..:..x.:.:...:x.-....:.. 104M1D7M 67/111 60.4% 111/94230402 0.0% 1/111 0.9% 67948596 NA +3122 chr4 + 190214555 157149824 157149823 157149906 83 ATTTCTTTTCTTTTCCTTTCTTTCTTCCTCTCTTTTCTTTCCTTATTTTTTCTTCTCTTTTCTTTTTCTAGTTTTCAATTTTT chr4 + 94230402 69163346 69163345 69163428 69163346 69163345 69163428 83 ATTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTTGGCAGCCTTT ............x..:..........::.::.::....x::.::.:.:.:.x..x.:.:....x.:.x.xx..xx..:::... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 87986478 NA +4184 chr4 + 190214555 157152692 157152691 157152933 242 TTTCATTCCTCTTTCTGTTTCTGT-----AGGTATCTTCTCAGTCCTCAGCTTGGCCTCTGAGTGCACAACCCTTGCCGCTGAG---CTTCCCAAAGTTTCCTATGTGAAGGCTCTTGATGTTTGGCTTATTGCTTGCCTTCTCTTTGGGTTTGCTTCCCTGGTGGAGTATGCAGTTGTCCAGGTGATGCTGAACAACCCCAAAAGGGTTGAAGCTGAAAAAGCCAGAATTGCTAAGGCTGAGCAAGCAG chr4 + 94230402 69083650 69083649 69083893 69083650 69083649 69083893 244 TCCCTTCCCTCTTACTTTCTTTATTAAATAGGTATTACAACGGTGCTGACCATGACAACACTGAGCACAA---TTGCCAGGAAGTCACTTCCAAAAGTTTCCTATGTGACAGCAATGGATCTTTTTGTCTCAGTTTGCTTCATTTTTGTGTTTGCTGCCTTGATGGAATATGGCACCTTGCATTACTTTACTAGCAACAGAAAAGGGGACAAA---GGAAAAGACAAGAAGGCAAAACCTAAGCCATCAG .::.x.:......x..x.:.:.:.-----......:x:xx.:..x..x.x.x..:.xx.xxx.x......---.....:xx:..---.....x................x:..xx.x...x...xxx.:x:x.:....:.:x.:....x.......x..:..:....:....xx:::x.x..xxxxx.xx:x.:....xxx...:...x::..---.:.....x..::.xx..x..:x..:...x.x... 24M5I41M3D11M3I126M3D34M 146/236 61.9% 244/94230402 0.0% 14/236 5.9% 88069042 NA +21694 chr4 + 190214555 157152703 157152702 157153015 313 TTTCTGTTTCTGTAGGTATCTTCTCAGTCCTCAGCTTGGCCTCTGAGTGCACAACCCTTGCCGCTGAGCTTCCCAAAGTTTCCTATGTGAAGGCTCTTGATGTTTGGCTTATTGCTTGCCTTCTCTTTGGGTTTGCTTCCCTGGTGGAGTATGCAGTTGTCCAGGTGATGCTGAACAACCCCAAAAGGGTTGAAGCTGAAAAAGCCAGAATTGCTAAGGCTGAGCAAGCAGATGGAAAAGGTGGAAATGTGGCTAAAAAGAATACTGTGAATGGAACAGGGACTCCTGTTCATATTAGCACTTTGCAGGTAAG chr4 + 94230402 22466044 22466043 22466356 22466044 22466043 22466356 313 TTTTTCCTTCTGTAGGTATTTTCTCAGTGCTCAGCTTGGCATCTGAATGTACTACTCTTGCTGCTGAACTTCCCAAAGTGTCTTATGTGAAGGCCTTAGATGTATGGCTGATTGTTTGCCTTCTCTTTGGGTTTGCATCGTTGGTGGAGTATGCAGTGGTTCAGGTAATGCTAAACAACCCAAAGAGAATTGAAGCCGAAAAAGCCAAGATTGCCAAGGCAGAACAAGTTGAAGGAAAGGGTGGAAACACTGCCAAAAAGAACACTGTGAATGGCACAGGGACTCCTGTCCACATCAGCACTTTACAGGTAAG ...:.x:............:........x...........x.....:..:..x..:.....:.....:...........x..:...........::.x.....x.....x....:.....................x..x:................x..:.....:.....:........x..:..::.......:..........::.....:.....x..:....:x..x.....:........:::x..:........:...........x..............:..:..:........:........ 313M 261/313 83.4% 313/94230402 0.0% 0/313 0.0% 134686659 55527896 +3177 chr4 + 190214555 157154400 157154399 157154456 57 TTTGTTTCTCTATCTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTT chr4 + 94230402 56907966 56907965 56908022 56907966 56907965 56908022 57 TTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTT ...x:.:...:.......:.:..::..............:......:x.x..:x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 100246434 89968121 +41106 chr4 + 190214555 157170408 157170407 157171291 884 ATTGTCTTCAATATTTATT-CTTAGGTTGGTGAGACCAGATGCAAAAAAGTTTGTACTTCTAAGTCTGATCTGAGATCTAATGACTTCAGCATTGTTGGAAGCTTACCAAGAGATTTTGAACTATCCAATTATGACTGCTATGGAAAACCCATTGAAGTTAACAACGGACTTGGGAAATCTCAGGCTAAGAACAACAAGAAGCCTCCCCCTGCGAAACCTGTTATTCCAACAGCAGCAAAGCGAATTGATCTTTATGCAAGAGCATTGTTTCCTTTCTGCTTCTTGTTCTTCAATGTTATATATTGGTCTATATATTTATGATAAATCTTT--TCCATTTGTACA-----AAATAAAATTCCATTTCATTGTGACCTACTCCTTTCATAAATGCCAATCTGTGAGAACTTTTGAATTTTCATAGCAACA--TTGCATTTTGGATGCCATTTGATTGTAATAAAACTGTGGCACCTTAATTTTGAATGGCAGCATGATCATGTAATATCTGTGC-TCTAATAACGATGTATAT--ATGTATAGTGAACATATTGC-TTAGTAACAAATGAAGGACAA-GCATACTACATAATATAATCCATACAATTCTCTTCAGTTAGT-GTAAACTGCAAATACTACAGATAATTCTGATAATAAAA-TGATATGCACGCTGAATCCTGCTATGGTCACCATTCTAATGTATGTAGTATTTCAAATTTCCTTCCTTGTAACTTTC-----AAAGAAAGCCATCTTATTCTTGTAAAATTTTAGATGGTATTATCACAGATTTAAAAAGGTTGTATTACATATTGTTTAAACTTTGTAAGTAGAAATA-TATCTGTTATAATTATACAGGCTCTGTGGAGAAATAAAGTTCAAAATAT--ATTAATTTGT----AAAATCAGC chr4 + 94230402 22475655 22475654 22476559 22475655 22475654 22476559 905 ATTCCCCTCACTCTTTATTTCATAGGTTGGTGAGACCAGATGCAAAAAAGTTTGCACTTCGAAATCTGATCTGAGATCCAACGATTTCAGCATTGTTGGAAGCTTGCCAAGAGATTTTGAATTATCAAATTATGACTGTTATGGGAAGCCCATTGAAGTCAACAATGGGCTCGGAAAGTCTCAAGCCAAGAGCAACAAGAAGCCTCCTCCTCCCAAGCCTGTCATTCCATCAGCAGCAAAGAGAATTGATCTTTATGCAAGAGCACTGTTTCCTTTTTGCTTCTTGTTCTTCAACGTCATATATTGGTCCATATATTTATGATAAATCTTTTATTTATTTTTACATCTGTAAAATATATCCCATTTCA---TATCCCTTCCCTGTCATGAAGGCCAATGTGTGAAATTATTTGCGTTTGCAAAGGAATATGTTGCATTTT-GATGCCATGCGATTGTACTGAAAATATGGCATCTGAAATTTGAATGAAAGCATGACACTGCAATGTCTGTGCTTCTACCAATGTTGTATATAAATGTACAGCATACATCTTGCTTTAGGAATATATAAAAGATGACGCATACTACATTATA-AAGCTGAATAACTCCCTTTGGTTATTAGTAACATACAGAGATTTAAAGTGTTTCTGATAATGAAACTGATGTGCACGTTGAGTATTA-TAAAATCAGTATTCTAGTATATGTAGTATTTAAAA--GCTTTTCTGCTGACTTTCTGAGAAAAAAAACACATCTTGTTCTTGTATAATTTTAGATGGCACTGCTGAAGAAAAAGTTAAGTTGTGAATCCTATTATTTAGACATTGTAAGTGAAGGCAGGATTGAATGAGCTGATCTTGTCTATATGGAAAAATGAAGATCAGAGAATTGCTGATTTTGTAATCAAAATCAGC ...x:.:...x.x......-.x................................:.....x..:..............:..:..:....................:...............:....x...........:.....:..:...........:.....:..:..:..:..:.....:..:....:...............:...x.x..:.....:......x...........x.......................:..........:.................:..:...........:.....................--.::....x....-----...xx.x..:........---.:x..:x::...x....:..x......x.....:.x:x....x:...x..x..x..:.--.........-........x:.......x.:...x.:.....:..x..x........:x.......:xx..:...:.......-....x:..:.x.......--.....:..::x....x....-....x..:.x..:..:..::.-...........x...-..x.::x.:..:..:...::....x.-....xx.:..:.x.:.xx.::.:x..........:...-....:......:...:.x:.:-..x::...x:......:.:............x...--x.:..:..xx.:......-----...:...xx......:........x............:.:.::::x...xxx.:xx.:.....:xxx.x....:....:..x........::.:::.-x..:x:x.:x:x.x..x:x.x..x.:....:....:...x...:.:x..--x.x.x.....----......... 19M1I311M2I12M5I18M3D58M2I9M1D72M1I18M2I20M1I21M1I15M1D26M1I38M1I21M1D35M2D18M5I97M1I49M2I10M4I9M 677/876 77.3% 905/94230402 0.0% 37/876 4.2% 134694753 55519802 +11203 chr4 + 190214555 157220724 157220723 157221140 417 GGGTGAGTGTGTGTGAGTGCATGGGAGGGTGCTGAATATTCCGAGACACTGGGACCACAGCGGCAGCTCCGCTGAAAACTGCATTCAGCCA---GTCCTCCG--GACTTCTGGAGCGGGGACAGGGCGCAGGGCATCAGCAGCCACCAGCAGGACCTGGGAAATAGGGATTCT------------------TCTGCCTCCACTTC-------AGGTTT--TAGCAGCTTGGTGCTAAATTGCTGTCTCAAAATGCAGAGGATCTAATTTGCAGAGGAAAACAGCCAAAGAAGGAAGAGGAGGAA-----AAGGAAAAAAAAAGGGGTATAT---------TGTGGATGCTCTACTTTTCTTGGAAATGCAAAAGATTATGCATATTTCTGTCCTCCTTTCTCCTGTTTTATGGGGACTGATTTTTGGTGTCTCTTCTAACAGCATACAGATAGGTAGGTACCC chr4 + 94230402 22493027 22493026 22493462 22493027 22493026 22493462 436 GAGGGAGCGCGTGTGAGGGCAGGGCCGGCCCGGGAGCGCTCAG---CAGTGGGAGCGCAGCGGCGCCGCCGCCGA---CGGCACGCGGCCACCCGCCCCCCGCTTATTTCCGGAGCCGGGACGAAGAGTAGAGCGGCGGAGGC----------AGCTCGGGAACGGTGTCTCCCGCTCGCGGTGCCCGACCTCGGCCTCGCCTCCCTGCCCAGGGTCTGCTCGCAGCC-----CCCGGCCGCTCGACCGGCGTGCGGAGGATCGAATTCGGCGG------CGGCGGaggaaggaaggaaagaaagaaggaaggaagaaagAAGCGCCGTTTCTGTGGCTTTGTGGATGCTCTCCTTTTCCTGGAAATGCAAAAGATTATGCATATTTCTGTCTGCCTGGCTCCCGTGTTGTGGGGACTGATCTGGGGGGCCCATTCCAACAGCATACAGATCGGTAGGTgccc .:.x...:.:.......x...x..xx..x:xxx..::::..x.---..x.....x.:.......:x.x....:..---.x...:x.:....---.:..:...--x.:...:.....x.....:::.x.:..:..:x.:.x:..----------.x..x..:..::.x.x:..:------------------..x.....xx..:.-------:...:.--.x.....:-----.:x::::...xxx:.::x:...:.......x....:.xx.:------.:..x:.:........:::..:..-----......:...:...x.x::.x.---------............x......:................................:x...xx....:..x..:...........:.xx..x.:.:x...:..............x.......:... 43M3D29M3D13M3I8M2I39M10D20M18I14M7I6M2I8M5D41M6D24M5I22M9I123M 273/390 70.0% 436/94230402 0.0% 73/390 18.7% 134727697 55486858 +10378 chr4 + 190214555 157221651 157221650 157221814 164 TGTTTGTTCTTTGCAGGGGGGCTATTTCCTAGGGGCGCCGATCAAGAATACAGTGCATTTCGAGTAGGGATGGTTCAGTTTTCCACTTCGGAGTTCAGACTGACACCCCACATCGACAATTTGGAGGTGGCAAACAGCTTCGCAGTCACTAATGCTTGTAAGTA chr4 + 94230402 22493541 22493540 22493701 22493541 22493540 22493701 161 TGTTTGCC---TGCAGGGGGGCTGTTCCCGAGGGGCGCCGACCAGGAGTACAGCGCGTTCCGGGTGGGCATGGTGCAGTTCTCCACCTCCGAGTTCAGGCTCACTCCCCACATCGACAACCTGGAGGTTGCCAACAGCTTCGCCGTCACCAACGCCTGTGAGTA ......::---............:..:..x...........:..:..:.....:..:..:..:..:..x.....x.....:.....:..x........:..x..x..............::.......x..x...........x.....:..:..:...:.... 8M3D153M 131/161 81.4% 161/94230402 0.0% 3/161 1.9% 134728110 55486445 +3056 chr4 + 190214555 157225301 157225300 157225373 73 TTTTCAGTTTCTTTCATTTTTTCTCCATCATTCCCTTTTTCTTTTCCTCTCTCCCCTCACTCATTTTTTCCTT chr4 + 94230402 26256438 26256437 26256510 26256438 26256437 26256510 73 TTTTTTATCTCTTTCACTTCTGCTTTATCTTTTCCCTTGTCTTTTGCTCTACCTTCTCAAATCCTCTTTCCTT ....:x:.:.......:..:.x..::...x..:..:..x......x....x:.::....xx:x:.:....... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 130968863 59245692 +5361 chr4 + 190214555 157227186 157227185 157227375 190 TTCAACCTGCTGGCTCAAGAAGGA-TGGGGTATTTTCATTTCACATCAAGCCTTTAAAGTGCT--AGGGA-CATTGTACTGAGACATTATGACAAGTGGATGCTGATTCATGCCCAGATCTCAAGTTTTCTCATAATCTCTTCCAATAACA-CTTAGCAAACTTTCAAACTTCTTAGAACCTTGAAAATTTTAAG chr4 + 94230402 22496562 22496561 22496750 22496562 22496561 22496750 189 TTCATTCTGCTGGCTCAAGAGCCAGTGTTGTTTTTCTGTCTTAAATCAAGTCTT-ACAGTTCTGCAGGGATCACTGCACCATGACATTGTGACAAGGGGATGCTGATTCATGCATAAACCTTAGACCCTTTCGTTATATCTTC----AGCAGCTTTGAAAACGTATGAATATC-TAGCATGTTGCAACTTGTGAG ....x:..............:xx.-..xx..x...:::.:.:.x......:...-.x...x..--.....-..:..:..::x......:.......x................x:.:.:..:.:::::.:..:.x..x.....----.:..-...x.x....x.x::..:x..-...x.:x...x..x..x.:.. 24M1I29M1D8M2I5M1I72M4D4M1I21M1D21M 130/184 70.7% 189/94230402 0.0% 11/184 6.0% 134730624 55483931 +3501 chr4 + 190214555 157248518 157248517 157248625 108 TATATATATGTGTGTGTGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTG--TATATATGTATATATATGTATATATACATGTATATATACG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:..:.....x.x....xx::.:.x.:.:...::x:.:.....:x.....::x....::..:..:--:..::x.x.:.:.......:...:x.:...:..::.:... 68M2I40M 67/108 62.0% 110/94230402 0.0% 2/108 1.9% 136139324 54075231 +4331 chr4 + 190214555 157248527 157248526 157248669 143 GTGTGTGTGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTGTATATATGTATATATATGTATATATACATGTA-------TATATACGTATATATATACACCTGTATATATATACA-------TACGTATATATTTATG chr4 + 94230402 79265519 79265518 79265674 79265519 79265518 79265674 156 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATG ............x:.........xx........:...:.......:.:.:::.x..:.:.x.:.:.x:.:.-.:.:x.x......x...:.-------.x.x.:x..:..:.x..:..::.x.:..x:.::x..-------..:x....:....... 71M1D19M7I36M7I16M 96/142 67.6% 156/94230402 0.0% 15/142 10.6% 77983008 NA +3118 chr4 + 190214555 157248530 157248529 157248596 67 TGTGTGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTGTATATATGTAT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:...:x.::..:x..:.:...x.:....:..:............:..x:..:.::..x..... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 70614606 NA +3429 chr4 + 190214555 157248534 157248533 157248615 82 TGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTGTATATATGTATATATATGTATATATACATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGG------CATACATATGTAAATACATGTTTATGCACACATACACACATG .....:.:.............:...xx..:..x.------:...:...:..:x...:....x...::.:::...:.:..... 34M6D42M 55/76 72.4% 76/94230402 0.0% 6/76 7.9% 71413993 NA +3666 chr4 + 190214555 157256083 157256082 157256249 167 ACCAATAAAATGTCTTCAGAAGATACAGCAAACTATTGAGAGCTGCTTTACATCAAATTGTAATATTATATATTACATATATATGTTATATATTATATATAATATATAACATATATTACATATATATGTTATATATAATATATAATATATAATATATATATATAATA chr4 + 94230402 26320195 26320194 26320344 26320195 26320194 26320344 150 ATTAATAAAATATTTTCTTA-TATGTATTCAAATGTTGATATTTAATCAGC-TTAAATT---------TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTAT------TGTATATGTAATA .::........:.:...xx.-x..::.x:x..x.:....x.x:.:x.:x:.-.:.....---------...x.:....:.....::..:............x......xx.......xxx...:...x.x...xxxx..x.x..:...------.:.....:..... 20M1D30M1D7M9D80M6D13M 103/150 68.7% 150/94230402 0.0% 17/150 11.3% 130935888 59278667 +3639 chr4 + 190214555 157256143 157256142 157256296 154 TAATATTATATATTACATATATATGTT-ATATATT-ATATATAATA---TATAACATATATTACATATATATGTTATATATAATATATAATATATAATATATATATATAATATATAAATTATATATTACATATATATGTTATATATTACATATATTATA chr4 + 94230402 26320197 26320196 26320344 26320197 26320196 26320344 148 TAATAAAATATTTT-CTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----------GTATATTTTTAGTATTGTATATGTAATA .....xx....x..-.x.....:.:..-.x..:..-....x....x---.xx..:x...x.:....:.....::..:....x.......x......xx......x...x..:...xx.x..----------:.....x..xx:....::....:.x... 14M1D12M1I7M1I10M3I72M10D28M 104/143 72.7% 148/94230402 0.0% 16/143 11.2% 130935946 59278609 +3602 chr4 + 190214555 157256207 157256206 157256321 115 TATGTTATATATAATATATA-------ATATAT---AATATATATATATAAT--ATATAAATTATATATTACATATATATGTTATATATTACATATATTATATATAATATTATATATTACATATATA chr4 + 94230402 26320189 26320188 26320313 26320189 26320188 26320313 125 TGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATT-TATCTCACATGTATATACTACATATTATATATACTATATACAATA-TATTTATTATGTATCTA .:...:..xx....x....x-------..:...---...:.xx....x....--::x......-...x.:....:.....::..:......:.....:......:....-...x.....::...x.. 20M7I6M3I16M2I9M1D45M1D17M 86/113 76.1% 125/94230402 0.0% 14/113 12.4% 130936018 59278537 +3441 chr4 + 190214555 157260783 157260782 157260855 73 TCCTCCTCTTTTTCCTCCTTCATTTCCTCCCCCTCCTCCTCTTTCTTCCTTCTTTTTCTTCCCTTCTTCTCCC chr4 + 94230402 53757790 53757789 53757862 53757790 53757789 53757862 73 TCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCC ...x:..:...:x....:.xx..::..:.....:..:....:..:..::.:......:.::::..:...:... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 103502993 86711562 +5718 chr4 + 190214555 157262952 157262951 157263123 172 CAAGTTATACTTTTATA-AAAAGAC--ACAGTGTGTAAACTGTTAATTATTTAGCCCAGAGTAGTTAACACATGCTTACTAAAAATATGACTTTTCTGGTTGACATTTAAATTTGTCAAGGTAAGCTACGAATAGCAGGATTTCTGCAAACTAGGCCA-CAATCTTACATGGTTAT chr4 + 94230402 22516759 22516758 22516923 22516759 22516758 22516923 165 CAAGTCATATTTTTATATAAAAGATTAATAATGCTTGAGATAT-----ACTTTGCCTAAGGTAGTTAGCACGTGCTTGCTCAAAATTTGACTTTCATGGCTGTCATGTGAATTTGTCAAGGAAGGCTGTGACTAG------TTACATAAACAAGGTCATTTATCTCCCATATTTGT .....:...:.......-......:--.:.:..:x.:.:x.:.-----.:..x...:.::.......:...:.....:..x.....x.......:x...:..x...x.:............x.:...::..x...------..x:::....x...:..-:x....:x...:x..:. 17M1I7M2I16M5D87M6D17M1I17M 116/161 72.0% 165/94230402 0.0% 15/161 9.3% 134746193 55468362 +3585 chr4 + 190214555 157302033 157302032 157302115 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:.........:..:........x.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 81268836 NA +16557 chr4 + 190214555 157303526 157303525 157303752 227 CCTTTCTATTTTTCCTATTC--TTCTAGTCTGCTCCCAGTTTTCGAGAGGAGTCTATGCTATTTTTGGATTTTATGACAAGAAGTCTGTAAATACCATCACATCATTTTGCGGAACACTCCACGTCTCCTTCATCACTCCCAGCTTCCCAACAGATGGCACACATCCATTTGTCATTCAGATGAGACCCGACCTCAAAGGAGCTCTCCTTAGCTTGATTGAATACTATC chr4 + 94230402 22534437 22534436 22534665 22534437 22534436 22534665 229 CCTAACTGCTTTTCTTTTTCCCTCCTAGTCTGCTCCCAGTTTTCCAGAGGAGTCTTTGCTATTTTTGGATTCTATGATAAGAAGTCTGTAAACACCATAACATCCTTCTGTGGGACTCTTCATGTCTCCTTCATAACTCCGAGCTTCCCGACAGATGGAACACACCCATTTGTCATTCAGATGAGACCTGACCTCAAGGGAGCTCTCCTTAGTTTGATTGAATACTATC ...xx..::.....:.x...--.:....................x..........x...............:.....:..............:.....x.....x..:..:..:..x..:..:...........x.....x........:........x.....:.......................:........:..............:................ 20M2I207M 199/227 87.7% 229/94230402 0.0% 2/227 0.9% 134769089 55445466 +16470 chr4 + 190214555 157312609 157312608 157312911 303 GCAATTTCATAA--CACAATCCTGA-----GTTATTCACGTATCTTTATCAGTCAT--------CATTTTTCTTTGCCTTCCTAGGCTTATCAACACTGCAAGCTGTGCTGGATTCTGCTGCTGAAAAGAAATGGCAAGTGACTGCTATCAATGTGGGAAACATTAACAATGACAAGAAAGATGAGATGTACCGATCACTTTTTCAAGATCTGGAGTTAAAAAAGGAACGGCGTGTAATTCTGGACTGTGAAAGGGATAAAGTAAACGACATTGTAGACCAGGTTTGCTACTTTCTGTTTTCTAATGATGCCAGATAT chr4 + 94230402 22540385 22540384 22540702 22540385 22540384 22540702 318 GTAATCTCATAAATCATCTTCCAGAAGCTTGTTATTGCTGAAGCTTTGTCAGCTATATCTTCTGCTTTCTCCTGCACATCACTAGGGTTATCAACATTGCAAGCTGTGCTGGATTCTGCAGCTGAAAAGAAGTGGCAAGTGACTGCTATCAATGTAGGAAATATTAACAATGACAGAAAAGATGAAACCTACCGTTCTCTATTTCAAGATCTAGAAGTGAAAAAGGAAAGGAGAGTGATTTTGGACTGTGAGCGTGATAAAGTCAACGACATTGTTGATCAGGTTTGCTATTCCTTGTTTTTCATTTATGGCAATTAT .:...:......--..:xx...x..-----......xx:.x.x....:....::..--------.x..:.:..x::.x.:x.....x.........:......................x...........:.......................:.....:.............::........:.:x.....x..x..x...........:..:x.:.........x..x.x..:...:..........:x.x........x...........x..:...........:.:::......::.x.x...x..:x... 12M2I11M5I26M8I254M 240/303 79.2% 318/94230402 0.0% 15/303 5.0% 134772224 55442331 +3339 chr4 + 190214555 157313712 157313711 157313798 87 TGTGTGTGTGTGTGTGTGTGAGTATGAGTGTATATGTGTGTGTATACATATGCATATATGTACATATATATGTGCACATATATGTAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTA--------GGCATACATATG----TAAATACATGTTTATGCACACATACACACAT .....x..............x....x.:....--------x.:.........----..x:.....:.x....::......:.:::.. 32M8D12M4D31M 59/75 78.7% 75/94230402 0.0% 12/75 16.0% 71479171 NA +3061 chr4 + 190214555 157315489 157315488 157315544 56 TAAATTTTATTAGGCTATGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTT chr4 + 94230402 73021694 73021693 73021749 73021694 73021693 73021749 56 TAATTGTTTTTCTTCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTGCTT ...x.x..x..xxx..:.........................x..x.x.....:.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 84293795 NA +3430 chr4 + 190214555 157315497 157315496 157315567 71 ATTAGGCTAT-------GGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGACACA chr4 + 94230402 89931279 89931278 89931349 89931279 89931278 89931349 71 ATTAGGATATCATTGTGGGGTTTTTTTTTGTTTGTTTGTTTGTTTTG-------TTGTATTCCTGTGTTTTTGAGGCA ......x...-------..............................-------....x..x:.x.........x:.. 10M7I30M7D24M 57/64 89.1% 71/94230402 0.0% 14/64 21.9% 67384218 NA +3254 chr4 + 190214555 157315506 157315505 157315545 40 TGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 55690043 55690042 55690082 55690043 55690042 55690082 40 TGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTT ..:x..............:..................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 101625463 88589092 +3257 chr4 + 190214555 157315506 157315505 157315540 35 TGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTT chr4 + 94230402 89314592 89314591 89314626 89314592 89314591 89314626 35 TGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 68000914 NA +3025 chr4 + 190214555 157315511 157315510 157315545 35 TTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTT chr4 + 94230402 12568759 12568758 12568793 12568759 12568758 12568793 35 TTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTT ..............................x.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 144746752 45467803 +3233 chr4 + 190214555 157315512 157315511 157315580 69 TTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGACACAGATTCTCGCTCTG chr4 + 94230402 66208612 66208611 66208680 66208612 66208611 66208680 69 TTTTTTTGTTTGTTTGTTTCTTTTCCCATACCTGATTTTCTTTTACGTTTAAAACAGATTCTACCTTTG ...................x....x::x.:::.x:....x....::x...:.x.........xx..:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 91106900 NA +4538 chr4 + 190214555 157317641 157317640 157317716 76 TTATTTGTGCTTATTAGGTTATTACCATTGGAAAACATGTTAAAGGGTACCACTACATCATTGCAAATCTGGTAGG chr4 + 94230402 22544161 22544160 22544235 22544161 22544160 22544235 75 TTTTTTTTTCTTAC-AGGTCATCACAATTGGTAAACATGTTAAAGGATACCATTATATTATTGCAAATCTGGTAAG ..x...x.x....:-....:..:..x.....x..............:.....:..:..:...............:. 14M1D61M 62/75 82.7% 75/94230402 0.0% 1/75 1.3% 134773480 55441075 +3557 chr4 + 190214555 157317839 157317838 157317918 80 AGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATTGCTTGAATCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--...x....:.:...........::........x.xx.x:..x::......:.......x:xx:..:..:.. 7M2D71M 57/78 73.1% 78/94230402 0.0% 2/78 2.6% 81284639 NA +12302 chr4 + 190214555 157321420 157321419 157321609 190 AATGTGTTCTATGTTTAGGGATTTACTGATGGAGACCTATTAAAAATCCAGTTTGGAGGTGCAAATGTCTCTGGATTTCAGATAGTGGACTATGATGATTCGTTGGTATCTAAATTTATAGAAAGATGGTCAACACTGGAAGAAAAAGAATACCCTGGAGCTCACACAACAACAATTAAGGTTTGCTTTG chr4 + 94230402 22546131 22546130 22546320 22546131 22546130 22546320 190 AATGTTTTCTGTGCCCAGGGATTTACTGATGGAGATTTATCCAAAATTCAGTTTGGAGGAGCTAATGTCTCAGGATTTCAGATAGTTGACTATGATGATCCTTTGGTGTCAAAATTTATACAACGTTGGTCAACACTGGAGGAAAAAGAATATCCTGGTGCACACACTAGTACAATAAAGGTATGTCTTG .....x....:..:::...................::...:x.....:...........x..x........x..............x............:.x.....:..x.........x..x.x..............:...........:.....x..x.....x.xx.....x.....x..::... 190M 158/190 83.2% 190/94230402 0.0% 0/190 0.0% 134775289 55439266 +22468 chr4 + 190214555 157332789 157332788 157334136 1348 TTCTTATGAAATGTGTGTGATCCTTTGCAGTATACTTCTGCTCTGACCTATGATGCCGTTCAAGTGATGACTGAAGCCTTCCGCAACCTAAGGAAGCAAAGAATTGAAATCTCCCGAAGGGGGAATGCAGGAGACTGTCTGGCAAACCCAGCAGTGCCCTGGGGACAAGGTGTAGAAATAGAAAGGGCCCTCAAACAGGTCAGTTACTCAAAATAATCGTTAACGTGACTTAATATGGCCATTAATGTTTTC------TTCCTGCTAAATTAGTCATCCTTGTCTTATT--------CCTTGTGTCTAATATACAGGCAA--------------------TGTTCTTTTCTAACAACACAAAGGTAGGTTGAAGAGAGAAA----------CAAATATTATTGATGTAGTTTTCTTGACTTCATCTGGTTAAAGTAATCTGT----ACAGTGTATATGTTTGGTTGAAGTAAATATATAACTCTGCTGCTTTCCCATT--TCTTCAT-----TAGGTTCAGGTTGAAGGTCTCTCAGGAAATATAAAGTTTGACCAGAATGGAAAAAGAATAAACTATACAATTAACATCATGGAGCTCAAAACTAATGGGCCCCGGAAGGTAA------------------ATCCTTAGTGATTTAAAGGCAGTTCTATGTGAGGAGGTGAGTTAGCTA----------GCCTATGAGTTCACCCTTCCAGAGAATTCTGGAGATGTGTATTC--ACATAGAGTTTA---ACGACTTCCAGA----AACAGATATATTTTGAAGTTTTTTTTTCCTAA-----AGTCTGTTTATTTCTGGTAAGTAACATTGAATTGTAATTTTAAAAATAATTATAGGTAGAGCTGTTGAACTTTAATTTTTTAGACTGAAGGGGAAGTCTTTAATGAAAAGAGAAAGAATTATTGTTGAAGGTTTACAGTTCAGAAGACAAA-AAGTAGCTGGTGCAAATACACATGTAACTGTTCAATTCAACAT-CAACCTTTTAGCTGTTTAGGCTAAAATGTCATTA--TTTGGATTTTAATTACATTTCT-----ATAT-GACCACTCCCAAACAATT-ACTCTTAGAA-----------AATACAAAAA-----------GTGAATATGAA-GAGACA--------------AGTCATTTTTAGGAATTTTTTTATACTTCCTTTTATTCCTGTTAG-ATTCACATATATAAAAGACATTTCTATTTAGA---ACAAGTCC--AGTAAATGTGGTTCTAATTTCAGATTCAGACATGGCTTTGAAAATAATTAAAT---GCTTTGCTAATAGACAAGTCATTTATCCATACACCTGTCTGCTGTAACCT-TTTCCAGATTGGCTACTGGAGTGAAGTGGACAAAATGGTTGTTACCCTTACTGAGCTCCCTTCTGGAAATGACACCTCTGGGCTTGAGAATAAGACTGTTGTTGTCACCACAATTTTGGTAATTTGCTACATAT chr4 + 94230402 22557224 22557223 22558612 22557224 22557223 22558612 1389 TTTTAATGAAATATTTTCACTCCTTTTCAGTATACATCTGCTCTGACCTATGATGCTGTGCAAGTGATGACAGAAGCTTTCCGTAATTTGCGTAAACAGAGGATTGAGATCTCCAGAAGAGGAAATGCTGGAGATTGTCTTGCAAATCCAGCTGTACCCTGGGGTCATGGTGTAGAAATAGAAAGGGCATTGAAACAGGTAGCTTCCCTAGAATGAATGCTGGGATGAATGCATGTG-----TAAAGTCTTCTATAAATGCTTGAAAAAAACTTTCCACTTTTCTAACCTGACTGGATCTTGCTGAGAATAATGAGGAAATTAACTCCACGTCAGGAATGTGTTCCTTT--------ACTAAGTTGTGTTGGATACGGAAAGTGTCTAAAGTGAATGTTTTTGATAAA------------TCA-------ATAATTATTTGTGGAAACAAAATTCATTTT---TCTAAAAAGGAACATAATTTAATTGTTACCACTTTCATCTTCATCTGTATAGGTTCAGGTGGAAGGTCTAACAGGGAATATAAAGTTTGATCAGAATGGAAAGAGAATCAATTTTACGATAAATGTCATGGAACTCAAAAGTACTGGCCCTCGGAAGGTAATTTGAATTGTCTTACAGTGTCTTTAAAGGTTTTATCACA---CTAAGCAAGGGGTTAAGGTAGGTAATGAAACACTACAAATGAGTTAAAGCAT-----GACTTGTGATAATATTTATTCAGAGATATATTCTATGTTGGTCTTGCAGAGCAGAGTAAAAGCACCT----ATTACTTCTTTCTAACAAATAGAGTTTTTATTTCTGGTAAGTACTACATGACAGTATTTTC---------------------------CTTTCAGTTTTGTGGATTAAA--------CTTC-----------------TTACTTTCT--GATCTGAAATACTGAATGTGAGCCAGTAACTGG-GCAGATACACATCTGAATGACAAATACAGAATACTGCTTTTCAGTAATGTTTCTTTAAATGTGATTATCTTTCTGCTGTAATT-TATGTCTTCCTAATATGGAGTACTTAATAAGAATTCAATCTCACAGCAGATGACATTGATACTAAAACTTCTTAATATGTGAATGAAAACGAAATACTTAAATTGGCCAGAATAATGTGAACAAATGTCATTA-------GTTCATTCTTGTTAATATTTGC---TGTAGTAACTATAAATATTTACAATGATAAATCCATAGCTAAAATAGTCCT-CTGTGAGCATAAATCATGGGCATAGCACTAATAAACTTCAGCTTTTCTGTGAAAGTTCATATTCACTAGTGTTTCTGCATCCTATAAATTCTCTTTAGATTGGATATTGGAGTGAAGTGGACAAAATGGTTGTGAATCCACTTGATGGCCCTCTTGGAAATGAATCTTCAGGACTAGAAAATAAGACTATTATTGTCACCACTATTTTGGTAATTAACCTCATAT ..:.x.......:.x.x::x......x........x....................:..x...........x.....:.....:..::.:x.x..:..:..:.....:......x....:..:.....x.....:.....x.....:.....x..:........x..x....................x:.x........x:x..x.::.:...:.x:.:.::x:...x.xx..:..-----...x..:...------.x.:..xx...xxxx.:x:x...x...x.::--------:....:xxxx....xxx...x..--------------------.....:...--------..x...x.:x....:.x.x:....----------::...:..x.....:x.------------...-------.x.:.x..:...----...:x:.x:..x..---.:x..:x.::x.:....:.:x::..:.x:.x.x..--.......-----...........x........xx....:..............:...........:.....x..:.x...:..x..::.......:.......x..x...x..:..........------------------:..:...:x.:...x.xx:..---...x.::...:.x.:..x...x..----------:.xx.......x.xx.x.-----..x..x..:x:..:.x.....--.x...x.x.:..---xx.x...x....----.::.:.x::.::.----:..x:..:..:....-----..xx.x.................x:.:xx:.:x...x...:---------------------------x:..:.:....x.:..:.:..--------...:-----------------...:.x.:x--.:.:.:x.:.x.x...x:::.:-x....:....-...:........x.:.x..x:x...x..:x..-.x:.:...:..:x:.x.xxx:.x......x....--...xx::.x.....-:..x...-----....-..x:...:xxx..x....-.x...:.x.:-----------:....x....-----------......:x:..-..:.:.--------------.:.x..x.xx.x:...x.:x...-------x..:....:.....:-...::.---.:..:x.:x:..xxx......x.---.:..:...--..:x..x:.:..:..-x.x.x..xx.x.:x.....x:x.::x.x....x..x.---.....x..:xx.:.xxxxx:...:.::x:.::x:...:x.x..:...x:.-.:.::.......x..:..........................x.x:.:xx:...xxx....::.........xx.:..x..:..x..:.........:..:..........x............x:.:x..... 237M5D10M6I31M8I23M20I9M8D24M10I17M12D3M7D12M4I14M3D35M2I7M5I112M18I21M3D24M10I18M5D21M2I12M3I12M4I13M4D15M5I41M27D21M8D4M17D9M2D22M1I10M1D32M1I34M2I14M1D7M5I4M1I18M1I10M11I10M11I11M1I6M14I23M7D15M1I6M3D23M3I8M2I15M1D37M3I50M1I134M 839/1234 68.0% 1389/94230402 0.0% 269/1234 21.8% 134775565 55438990 +62822 chr4 + 190214555 157335645 157335644 157337127 1483 AGCTAAAGCAAAGTCTTTTCATATAGGAATCTCCGTATGTTATGATGAAGAAAAATCATGAAATGCTTGAAGGCAATGAGCGCTATGAGGGCTACTGTGTTGACCTGGCTGCAGAAATCGCCAAACATTGTGGGTTCAAGTACAAGTTGACAATTGTTGGTGATGGCAAGTATGGGGCCAGGGATGCAGACACGAAAATTTGGAATGGGATGGTTGGAGAACTTGTATATGGGGTAAGTATAGCTCTTCTCATAGATAAAGTCATTCAATTTGAATTGTTG---TTGACAGACT-------GCTTCCTCTCCCTGTGAAGTATCTATATCTGAGG----TTGTTGATTTCCCACATTACTCTAGAAACATTATCTTGTT---GATTTGTGAACATCTGAAAGATTAAGATTGAAGC-CAGAAGTAGAC-----ATGTAGATTAACT-------GAGACAAGC----ATTTCATCTCTCTTG--AAGCATATGG--------------------GCCATATGTATTGTCAAAAGGCTGCAAATGCAT--GGATGCAGTGCAGATGTGTAATGATCATAGTCAAGCCAGCTGGGTATACTGTGTATTCATAAAGAGGAGGGGCATTCGGGGAATAATTCCT----TTTTGTTTATCCTTTACTGGGACTATACCAAGGAAAAAATTATTGTCATTTTTCTGATTTCCTCTCCTTTTTCTTTGATCCAGTGACATAACCACGATTCCTTTTTCACCATGACTCCAGGTACTATTACTTTCCTTTT----TTTCCCTTACAGAAAGCTGATATTGCAATTGCTCCATTAACTATTACCCTTGTGAGAGAAGAGGTGATTGACTTCTCAAAGCCCTTCATGAGCCTCGGGATATCTATCATGATCAAGAAGCCTCAGAAGTCCAAACCAGGAGTGTTTTCCTTTCTTGATCCTTTAGCCTATGAGATCTGGATGTGCATTGTTTTTGCCTACATTGGGGTCAGTGTAGTTTTATTCCTGGTCAGCAGATTTAGCCCCTACGAGTGGCACACTGAGGAGTTTGAAGATGGAAGAGAAACACAAAGTAGTGAATCAACTAATGAATTTGGGATTTTTAATAGTCTCTGGTTTTCCTTGGGTGCCTTTATGCAGCAAGGATGCGATATTTCGCCAAGGTTGGTTACTCACCTGCTTCAACTTTGTGCATTTCAGGTCTCA---AGTGGACATTCATGGTGTTTATGGATTCACCCTAAAGAA----GTTACCAGCTGCCGACTTCCTGTCCAAGCAGTTTAAGAC--TCTTGAAGGACA-----TCCTCTTAGCTTCGGCATAAGTCTGTGAAATATTTGAACAATGTTCTTTGAATGTTGCTCATCTATTTCTCTGGTGAAATTATACACACCATGAAGAGGCTATAAAATGCATAAGGTTCCTATCATTCCATGCCTTCTTGGAGGGGTACCGTGTTTTTGCTGCATATTCTCATTTTACAGTCATCTGTGTG-TTGATCCACAG-ACCTGTATATGGGAAAATGGGCAACAT--TATTTATTAACTGCAAAG chr4 + 94230402 22559677 22559676 22561164 22559677 22559676 22561164 1488 AGCTAAAGCAAGTTCTTTCTGTGCAGGAGTCCCCATATGTTATGATGAAGAAAAATCATGAAATGCTTGAAGGAAATGATCGATATGAGGGCTATTGTGTGGACCTAGCTACAGAAATTGCTAAGCACTGTGGATTCAAATATAAGCTCACAATTGTTGGGGATGGCAAGTATGGGGCAAGGGATGCAGATACGAAAATATGGAATGGGATGGTTGGAGAACTTGTTTATGGGGTAAGAACATCTATTAT----AATAAAACAATTTAAAATGACTGATGGGATTTATGAGATTTGGTTTAGTTTTCTCCC----TGAAGTA---------GAGGAAAATTATTTAATTCCTCTGATAC---AGAATTAATAACTTGTCTTAGACTAAAAAAAAA--AAAAAATTAGAAGTAAGGCACAGAATTGGATTTTAAATGTAAATGAAGTTGGGAGGGAAATGAGTGCATATTTCACCCTTCTTACCAGGCAAAAGGCTTTACTAACACTTTTAAATGCCATAT--ACTTTTAAAAGGTCATATGTAAATTGGGAAGCCTGGAATATGT---------------CAACCATATGGTTGTA-TGTAT-TTCAGTACGAAGAGT----TTCAACTAAAAATTTCTGAAATTTTCTATAT----------GATATTTTCAGTGAAAAGAATGTTAGC-TGTGTCTGCTGTCCTAT---TTTGCATTTATGAAATGAAATGAAAACTAAACGATG---ATCATAGCACTAGCTATTGTTTTCTTTCTTTTATTTTTTCCTTTACAGAAAGCTGATATTGCAATTGCTCCATTAACTATAACATTGGTGAGAGAAGAGGTGATTGACTTCTCAAAGCCCTTTATGAGCCTGGGGATATCAATAATGATCAAGAAACCTCAGAAGTCCAAGCCAGGAGTGTTTTCATTTCTTGATCCATTAGCATATGAAATCTGGATGTGCATTGTTTTTGCCTACATTGGGGTCAGTGTAGTTTTATTCCTGGTCAGCAGATTTAGTCCGTACGAGTGGCACACAGAGGAATTTGAAGATGGAAGAGAAACACAGACTAATGAATCAACTAATGAGTTTGGGATATTTAATAGTCTCTGGTTTTCCCTGGGTGCCTTTATGCAGCAAGGATGCGATATTTCGCCAAGGTTGGTTACTCGCCTTTTTCAACTTTGTGCATTTTTGGTCTCAGCCAGTGGAGGTTCATGGTGCATATATTTTCACTTGAAAGAAATGCATTATTGTGTTTCTTTTTCCTCACCAAA-AATTACAGACGTCCTTGAAATAAAAGCAGTCTTCTGACACTAGGTA----------------ATGATCAATACTATCTTAATGCCAATTGTATGTTTGCCAAGTGAAGTTATATATACCATGGAGAGACTGTAAAATGCATAAGGTTCAAATCATTCCATGCCTTCTTGGAGGGGTACCGTGTTTTTGCTGCATATTCCCATTTTACAGTTGACAGTGCATTTGATTCACAACAACTGTAATGGGAAAGAAGGGTAAAATACTAGCCATGAGCTACACAG ...........:x.....:::.::....:..:..:......................................x.....x..x...........:.....x.....:...:.......:..:..:..:.....:.....:..:...:.x...........x.................x...........:........x..........................x...........x.:.x..x..x.----:.....::x...:..xx...x.x:.x.---..:xx...:.-------.:..:...:.----.......---------....----..:..x.x....:x::x...---....x:.x..x.....:---..:.x:x:..x.x--:...:....::.x.:.:..-.....x.:..:-----.....:..x..x.-------..:.::..:----......:.::....:--.:...x.x..--------------------.......--.:.x.:......::::.x:.:x..--...x..xxx.x.x....---------------x.:...xx...x.:..-...:.-....xx.x..:...x----...::xx..x....:..----....x.x...----------..:xx.x:..:x.....:.x.:..:x.-.x.x....x.x....x.---...x.x..x..xx.:...x..:.xx..x.xx.xx.x---.:...::.x.:..x..:.:..x::..:.....----.....:......................................x..x:.x...................................:........x........x..x...........:..............:..............x...........x.....x.....:....................................................................:..x..............x.....:.......................:.x..:...............:........x.....................:...................................................:...x:.................:x.......---......x:.........:x...:xx.....::x......----:...:::xx.x:.xx:.....xx....:-.:..xx....--:......:x.x.-----..:...x.xx:.x..:.----------------x...x....::.x.:.x....:::x.::.x.:...x:.x:.....:.....:.:......:....:..:.................xx................................................:...........::x.x...::-.....:....:-.x.....xxx..:..:.x...:..x..--..x::..x.:..:..x.. 250M4D27M3I10M7I10M4D7M9D4M4I20M3D17M3I13M2D19M1I11M5I13M7I9M4I15M2I10M20I7M2D24M2I17M15D16M1D5M1D15M4D17M4I10M10D27M1D17M3D36M3D32M4I426M3I39M4I28M1D10M2I12M5I17M16D158M1I11M1I27M2I18M 1104/1404 78.6% 1488/94230402 0.0% 163/1404 11.6% 134775968 55438587 +3186 chr4 + 190214555 157337986 157337985 157338052 67 ACATATGTGTGTATATATATGTGTATATATATATATATATATATATATATATATATATATATATACA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .:.:......::..:.:....x.:.:..:.x:..:...:.x......:......:xxx......... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 111274687 78939868 +3033 chr4 + 190214555 157337987 157337986 157338054 68 CATATGTGTGTATATATATGTGTATATATATATATATATATATATATATATATATATATATATACACA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....::......:..:.:.:..x::.:..:.x:..:...:.x......:......:xxx.....:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 111274689 78939866 +25269 chr4 + 190214555 157341106 157341105 157341531 426 AATGTTTAATGATTTCCAGTTTCATTAACTAGTAGA--TACATTGAAAAATATAAAATTAAATATTCCCCTATAAGTCAAT-----ATTTGCATAATACTGCTAACTTGTTTTTTTATTAGGTCATTCATTTCACTTTACAAATCCATTTCATACTTGTTATTAGATCCCTCTCTGGGCGCATTGTTGGAGGTGTGTGGTGGTTCTTTACCCTGATCATAATCTCCTCCTACACGGCTAACTTAGCTGCCTTCCTGACTGTAGAGAGGATGGTGTCTCCCATCGAAAGTGCTGAGGATCTTTCTAAGCAAACAGAAATTGCTTATGGAACATTAGACTCTGGCTCCACTAAAGAGTTTTTCAGGGTAAGAGATTCTGCTTTGTAGTTTCTGATTTTGTT---CCTGAAATTTAACCTATTTAAACTTTGTTTCCCT chr4 + 94230402 22564235 22564234 22564667 22564235 22564234 22564667 433 AGTGTGCATTGGTTACCTATCCTATTAGTATGTAGAACTGCACTGCAAGATA--ACTTGAAATGCCTCCCAGTAGAATAATGCATCATTTGCATAAAACTGATAACGTGTTCGTTT-TTAGGACTTTCATTTCACTTTACAAATCCATTTCATACTTGTTATTAGATCCCTGTCTGGGCGCATTGTTGGAGGTGTGTGGTGGTTCTTTACCCTCATCATAATCTCATCCTACACGGCTAACTTAGCTGCCTTCCTGACGGTTGAGAGGATGGTGTCTCCCATTGAAAGTGCAGAGGATCTTTCCAAGCAAACAGAAATTGCATATGGGACATTAGATTCTGGCTCCACTAAAGAGTTTTTTAGGGTAAGAATTTCTACTTTTTAGTTTTTTGTTTTGTTGCAACTAGTTCTTCACTCGTGTAAATGTTTTCTCCCT .:...x:.x..:..x..x:.:::....::xx.....--.:..:..x..:...--.xx.x....::::...x:..::x:...-----..........x....x....x....:x...-.....x.x..............................................x.........................................x...........x................................x..x....................:........x...........:.................x.....:........:.......................:.........:x....:....x......:.x:.......---x..::xx:..x..:::.x....:x..x.:..... 36M2I14M2D27M5I30M1D282M3I34M 350/423 82.7% 433/94230402 0.0% 13/423 3.1% 134776871 55437684 +3040 chr4 + 190214555 157352723 157352722 157352762 40 AAAAAAAAAAAAAAAACACACACAACAACAACAACAAAAA chr4 + 94230402 4563808 4563807 4563847 4563808 4563807 4563847 40 AACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAA ..x.............:...x...:............... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 152788915 37425640 +3082 chr4 + 190214555 157353540 157353539 157353618 79 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 81320339 NA +3408 chr4 + 190214555 157355977 157355976 157356076 100 ATATTTATATATTTATATATATTTATATATGTATTTATATATATTTATATATTTATATTTATTTATATATGTATTTATATA-TATTTATATATTTATATTT chr4 + 94230402 22303518 22303517 22303618 22303518 22303517 22303618 101 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGCTATTTATAAAATTAATTTT ......x..x.x....:..::......:..xx......x.....x:.x.:....:...x..:x:.:.x..:...x..xx.:-........x.x...xx... 81M1I19M 70/100 70.0% 101/94230402 0.0% 1/100 1.0% 135052459 55162096 +244568 chr4 + 190214555 157359871 157359870 157366105 6235 ATCTGGCCCCTTACTTTTCCTGCAGAGATCTAAAATTGCAGTGTTTGATAAAATGTGGACCTACATGCGGAGTGCGGAGCCCTCTGTGTTTGTGAGGACTACGGCCGAAGGGGTGGCTAGAGTGCGGAAGTCCAAAGGGAAATATGCCTACTTGTTGGAGTCCACGATGAACGAGTACATTGAGCAAAGGAAGCCTTGCGACACCATGAAAGTTGGTGGAAACCTGGATTCCAAAGGCTATGGCATCGCAACACCTAAAGGATCCTCATTAAGGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTTATAGTATCCCACCTACCCTGATGTATCTTTAAGACTCTCTTACGGTTTGTATACGGATATGAGGTAACTCAC--------CATCACAAAAATGAC--CAAAAAACGTTTCTGA--------ATGTTTTTAAACATTTAGATACTGTTTTATATATTTATGACAGGATTTTGTTTTGTTTGGTTTGCTTTGTTTTAAAACATATCCTTTTTTTTTTCCTTTAAGAGTTAAAACACATTCATTTTAAGGAATA----CATGTTTGTTTAGCTTTACTTTGTTTGAGTTTTTTTTTCCACATTTCTAACT-ACCTTGTCAGTCTAC-----CAGCCTGCTTACAAA----CACTCTGCATAC-AGACTAA--GCAAATGGCTGTATCCTAACAGTAAACTGAAATAACTAACTGAGAAATATGCCACTTTTTAATTTTCATTTTAATTTTTGTTTAAGGGATATACTTTGGGGAAAGGAAAATGCACTTTGAATTTCTTTGCACACATCTCTTTACTATGTAGTTAACTCTTTGTATTCCTATTTTGTCGTTTGTTTTTTTTTTAGTGGAGTCACATTCAAGACACTGTTATTTGTTTGTTGTGGATGTGAGTACATTGCTGTAGAATATAGAACTCCCCATATTAGCACTCTTTCCTTTATTTTCTTTTTGTTATGCTCTACCACCTTACCCAAAGTTTCAGATTTTTAGTAGCTCATAG-----------TAACATATTATTGTGGCCTTTTTCCCACTTCATTTTTTTGTGACAAGAGTTGC------------------------CACAGAAGCCAAAGAAA---------AACAAATTAAAACAAAACAAA--CAAAA----AGTCTAAAATTTGCTCACCCTGTCTGACAAGTATGTTTTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAGCCCCAGTGAGAAAAGTAATGGGTAACTCAATGCAAAACAAAGTAAGCAGCAGCTATGCACAGTGTGGGCACT-CCGTGCCACCAAGTTTCCAACGCTAAGCTGAAGAGTGCAATTGGATGACCAGGACACTTGACTTCTTCTTTCTTTCTTCCTCTAC---TTCTCTTTCCCTCTCTTTCTCCATATCTCAAGGAAAAATTTGTAACTAATGGATTTGTTGCAAACTGTTGCACCTGCTGGTTACTTCCAGCGATACATTAATGCTCATTTGGCTCTGCAAATCTTACCGTTTGCTTAGGCCAAATGGCGCATCAATGACTATCGCTCTTACAAAGCTCTTGAATCAGTATTATGTAATGAATAACATAAAATAACATTGATAATGTTATTTATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAGTTGCTGCAGGTTTTATGTGAAAAAACAAAATCAAACACAAACAGCAAAATCAAACCACAAGTGTGTTAGTGGGAATGACCCATCTTAAATAGAATGTAAATGCAAATATGCATGAGATGCATAATTTGGTAAGATGTTTTGGTAATGCCTGCAGAGTTACTGATTTGTTGTTTTTATTTTATTTTAAATATAGTATATGCATTTAA-TATATTTATTTCAGTCTGTG-TTCATGTCTAACTCATACATAATAGTGCATGAAACAGCAACATACTGAAATAG-AGTAAATGGCCTAATGAGAACATTAATGAAACACTTAAGATTAAGTGATTATAGGGATGTGTGTTTTCCTTGTCTGTTTTGATGGCACAGTTGCAGCATCTATAGTATCACTGA-TTGGCAAGACTATTCGTGTGCATCATGTGTGCTCTGTTTGTATTGAATGGCAAAGCTTTGTTGTGAGATGTAGTCTAGTGGATG-AGAGTACACTGAGGGGATGAATTTTGGAGACCAAGAGATCAAAAATGGTACACTGCAATTCTAAACATGTCCAAAGCCTA------CTTGGAGAG----------TGAGAATGTACTGGAACCTTCACCAGCCAACATATTGCAGGATAACTTCCTGAAGGTTTATCTTAGCCATCTTAGTACTTTGAGGGATTGGAAATGTGGTCAGTCCTCCATTTATGACTCTACTAAGCCAGTAACATGGTCAACATTT-----AAAACTTGCTTCTACAATCACACGTATGGTTTATTTTAGCCCTGTTCGCTGTCAGCTTTACCAGATTATTTATAGGATGAAGAAACTGTCTTGTACCTTCAATTTTTCCCACGGTAAT-----------GGAATATAACTATTTATCAATTTATC-----------ACTGCAACTGACATAGCCAGGGAAATGTTTAAGAAATGAATAAATAGAAGTTTATTCCCTGCAGGTAGTCGATTGAGTCCACCAAAATCTTAAGCTAAATTTTATGTTGTTTCATGGTAGCTGTTATGAAAATGGACCATCTAAGAGAAAATC-------CATTGTTTCTCAAATTCAAATGCATTCTGTGTGACTAGGTTGTTCCCGTGATAATGCTATGTGACAT-TGCTGTTCTCTTCTATTCACCAGTTTGCCTTCCTAATAACCTCTTCTCATATACATTCTTTAGGAAAAGACCAGTGCCCTCAGTCTGAGCAACGTTGCTGGAGTATTCTACATCCTTGTCGGGGGCCTTGGTTTGGCAATGCTGGTGGCTTTGATTGAGTTCTGTTACAAGTCAAGGGCCGAGGCGAAACGAATGAAGGTGGCAAAGAATGCACAGAATATTAACCCATCTTCCTCGCAGAATTCACAGAATTTTGCAACTTATAAGGAAGGTTACAACGTATATGGCATCGAAAGTGTTAAAATTTAGGGGGTAGGAACGAGGCTCTAATACAAACTTTTTAGTGCACGTT-TAGCTTTCTTGTTGCGTCCTTAAGCTCTTTTAAATAAGGAAGGTGGCCAATGGATCATCCTGTATGTATTGTTGACGTTCTTCCATGTTCCCAGTTGGTGACTAACCTGCAGCTCAACTGTCTATTTTCCTCTTTAATGGCACAGTAGCTTGGGTGAATGTGGACAGATTCCTGCCATAATTGTGCTTTATTATTTGTAGTTCAG-CTTTGC----ACTGTTTGCTTTCATTTGCTAGAAGCTTTC----------------AGAT---------------------------------AGAAGTAAACTTTTCAAAAACAAC---------------CCTGCCT-----------------------TTCCTCTGGAT---GCATTTGAAAACCATAACGTATGATTTCTTTTTCTTTCTTTCCCTCCTCTCTCATTTAAGATGACCTTGAATGATGCCATGAGGAACAAGGCAAGGCTGTCAATTACAGGAAGTACTGGAGAAAATGGACGTGTTATGACTCCAGAATTTCCCAAAGCAGTGCATGCTGTCCCTTACGTGAGTCCTGGCATGGGAATGAATGTCAGTGTGACTGATCTCTCGTGATTGATAAGAACCTTTTGAGTGCCTTACACAATGGTTTTCTTGTGTGTTTATTGTCAAAGTGGTGAGAGGCATCCAGTATCTTGAAGACTTTTCTTTCAGCCAAGAATTCTTAAATATGTGGAGTTCATCTTGAATTGTAAGGAATGATTAATT-AAAACACAACATCTTTTTCTACTCGAGTTACAGACAAAGCGTGGTGGACATGCACAGCTAACATGGAAGTACTATAATTTACCTGAAGTCTTTGTACAGACAACAAACCTGTTTCTGCAGCCACTATTGTTAGTCTCTTGATTCATAATGACTTAAGCACACTTGACATCAACTGCATCAAGATGTGACATGTTTTAT----AAAAAAAGGAAAAAAAACATTTAAAACT---AAAAAATATTTTTAGGTATTTTCACAAAC--AAACTGGCTTTTAAATAAATTTGCTTCCATATTGGTTGAATAAGACAAAAACAATTAAACTGAG-------------TGGGAAGTGAA----TAAAAAAAGGCTTTAGGTATCGATTCCATATTTTTCAAAGCCAAATATGTAAATGCTAAGGAAAGTA-----AACAAAGAGGAGATTCCAATCTTGTAATTTAATATTGTTATTAAAACTTTAATG--TATCCTATTCTTTAACATTTGGTGTTAATATAAAATTACTTGGCAATGCTTGACATTTGAAATAAACATTTTTCTATTGTTTTA-TTGCAAGTGGTCCAATTAATTTTGCTTAGCTACAGTTTGGTCATAAATCAAGTGAGTTTAAA---------GACACTACCAAGTT---GTTAGGTGCCCAGA----GAAAATTTC-----TCCC------TTTTAAAAAGGCCAGGTGATTTTTC-----------------------------AAATGTAATCTTGCCCCCAAAG------------------------------TAATATCTGAATA--------------------------------------TCTT---TTTGACATG-------------TCTAAATAT-------ATATATATATAAA------GAAATATTTGTTAACACAAAAGCATTTGATCTATGTAGATAAATGCTAATAGATTTAAAAAGCTAAT-ATTAACAAATACCAGAATA-CGTGAAG---TTCCATTTTTAAAGTGTTTGAGCTTACAGAAGAGAAACAT-TCA--------TTTTAAATGAAGTAA----AAAATGCCTTGAAAGTAATTCT-----TTAGATAG---------TTGCCCATTGATTAAATTCCAAAAACT---AAATATGTTTTTAGCTTTAAAATTATAAAAGCTG----------------------TCATAAACTTTATATATTAT---GAATTTTA-----AAATATGTTTGAGTCTCCTGCAATAT--AGTTTCATCCCATTGACATCAATTAAAAATAACCCTAATATATTATTTTTATATTTAT--------------TCCTCAGGTGG----AATGGC--TATTTTAATATGCCCAGTGTGGATAAAATGTC---ACATTTCTGTAACTTTT------GACTAAAGAGCCTATATTTATCTAGTTAATGAATTTAAAGGATCTATCTTTCCCTTC----ATAAAATACCTCTT--ATTTCCATTAAAGCC--------CCCCAAGTTTAATTAATTTAGGATTTTGAATGATTATTGACATCCAATAGTTATTTTTAATA---TTTGTATTCTT------GTTATTTCTGGA------------AGAAAGCCTTTGTGTAGCACTTGGTATTTTGCAAAGTGCTTTTAAAACATTCTTACTTACCGTATTTCATAGAAGGGAAGGAAAAATGTAAGGTTTAA---CAGTAAGCACTTGCATTGAACATGGAGGCATGTGGTAT--------CATGATA--------------TTCT---TCACTAAATTTAGCTGTCCCTAATCACAGATCCTAAGGTAATATAATATAATTTTAGTGCATTTCTCCTCATCAGGAATGCTGGAG-GTGCATTTTAAGTTTTAATAATAAGTGCTAGAATGACCAAATTGCAGACTAATTGTTTCCATATTGTACTTAAAATGAGTTTTTAAAAGTGAAAAAGAAATG----ACTATATACAAT-CAATGCTATTTATTGTACCTCTGGGCCTACTCTTCTAAAAATTGTAGCTTATCGATTTTTCTCTGTCAAGCTTGAACTAATGTAAATAATTGAAATAATGTAAAGTTATATTTTCATGTTTTTATAGAT-ACAACATGACAAGAATACATAATGTAAGAGTATTTCAACTATGGATAATGTTGATTGGATAATGCACATCTCAGTT-ACAAGCAGTACTCATAGTTTAATATCCATGTAACGGTGCATCAATATATTGCTATATAAA-TATGTCTGTGTGCATATAAGTGAAAAGTGGTCAAACAAGAGTGATGACAGCTGTCTAAAGGTTTTTTTATTCATTTTATATAAAAACTGTTATGGAAAGACCAAAATGTTTATGAACTATTCTTATGTAAATTTACAATTGTCCTTTACTGTACTTTTTTGTTTACAGTATAGTACCTTATTTTCTGCTGTGTTAAGTGGGTGTCAAACTCCAAGAAGACATACACTTTCTATAACTTCTATTGAAGATATTGGAATTTCCAATTTTTCATGTGTAC---TATGTCAGAAAATGCTTTCGATTTTATTTTTAAATCTAACATCGGATGGCTTTTCCGGAGTGTTGTAAAAACTTCAATCATACAT--AAAACATGTTCTTACAAAAGGCAAAGATCTTTATTTTTTTTACTTAATAGTACTT chr4 + 94230402 22577486 22577485 22583886 22577486 22577485 22583886 6401 ATTAGGCTTCATATTGTCTCCACAGAGATCTAAAATTGCAGTGTTTGATAAAATGTGGACCTATATGAAAAGTGCAGAGCCATCTGTGTTTGTGAGGACTACAGCAGAAGGGGTAGCTCGAGTACGGAAGTCCAAAGGAAAATATGCCTACTTGTTGGAGTCAACCATGAATGAGTACATCGAACAAAGGAAACCCTGTGATACCATGAAAGTTGGTGGGAATTTGGATTCCAAAGGCTACGGCATCGCCACACCTAAAGGATCCTCATTAAGGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTTATAGTATCCCACCTACCCTGATGTATCTTTACTGATGTCT-ATGGTTTGTATAAGGATATGAGGTAACTCTCAAACATTGCATTTCAAACATTATATCAAATGAAACTGCCTATAGTGATGATATTTACGAATGTTTGGATACTTCCTTAAAC--TTCTTGCAGGTTTTC------------TAACCATGT----AAACTTTCattttattattattatta----tttGAACATTCCAATTTTAAGGATTGTTTTCTTATTTCTTTTCCTTT-TTTTTTTTTAGATTTGCTTTTCACGTTACTAGCTTATAGTGTGAGTCTATTTCCTCATACCTTGTAGAAAACGTCGCTCTGCTCATGAAACTAAAAGCGAATGGCTGCATTTGAACAGTAAACCGGAGTAACTAAC---AAAATGTGCCATTGTTTAAA--------------------GAGGGCTTTGTTTCGGGGAGAGGATAATGCACTATGAATTTCTTTGCACACATCTCTTTACTATGTAGTTAACTCTCTGTATTCCTATTTTGTTGTTTGTTTTTTT---AGTGGAGTCACATTCAAGACACTGTTATTTGTTTGTTGTGGATGTGAGTACATTGCTGTAGAATATAGAACTCCCCATATTAGCACTCTTTCCTTTCTTTTCTTTTTTTTATGCTCTACCACCTTACCCAAAGATTCAGACCGTTAGTTATCCATAGAGTATTCAGTACCACTTACTGTTGTGGCCTATATCCCACCTC-TTTTTTTGTGACcaaaggcaaaagaaaaagcaaaaaagcaaaatgcaaaaaagccaaacaaatgaacaaacaaaaaattaaagcgaaacaaaagcaaaagacaaGTCTAAAACT-GCTCACCCTGTCTGACAAGTATGTTTTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAGCCCCAGAGAGAAAAGCGATGGGTAACTCGATGCAAAACCAAGTAAGCAGCAGTTATGCACAGTGCTGGCAGGACCCTGCCGTTAGGCCT---------------AGAGCTCAATTGGGAGGCCA----------------CTCTACACCATTCTCTGAGGACTCTTTTCCCTTCCCTTC-------------GAAAATGTAGATTAGCTGTACATGTGCTAAAAACTGTTGCACCTGCTGGTTACTTCCAGCGATACGTTAATGCTCATTTGGCTCTGCAAATCCTAGTGTTTGCCTATGCCAAATGGTGCATCAATGGCTATCGCTCTTGCAAAGCTCTTGAATCAGTATTATGTAATGAATAACATAAAATAACATTGATAATGTTATTTATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAGTTGCTGCAGGTTTTATGTGaaaaaaaaa----aaaaacaaaaaacaaaa-aaaaaCACAAGTGTGCTAGTTGGAATGACCCATCTTAACTAGAATGTAAACACAAA---GCATGAGATACATACATTGGTAAGATATTATAGTAATGCCTGCAGAATTGCTGATTTGTTTTGT-----------------TAGTATCCATATTTAATTTTATGTATTTAAGTATGTGTTTTCTGTCTAAATGATACATGTTAATGCATGAACCAGTTATTTACAAGTATTGCAGTATCTATTCTAACAAACGTACAAAT-------TTCAGAGTAAATGACCCTAGGGATTTGCATTCTTCTTGTTTGTCGTAATGGCACTGTTGCAACACATACGACATTCCTGGCCTGACAAGACAAGCCATGTTCATCTTGTATGATCTGTATGTATTCGATGGCAGTCCTGTGTACTGAGGCAAAGGCAAGCTGTTGTGGTGCACAC------------------------AGAGCTCAGATAGCTTCCATTTCACATC--AGCCGAGCCAAAGCCGAGCAGTTCTTAGCGGGGATTTCCTGATGTAAAATTGCAGGCTCAGTCA-CAGTTAGAATACT--AGGAACACTAC--------------TGGCCATAGTAGAACTTAGTGGCATCGGGAA---------------ATAAAAGTATAAAGGGAGCTAATAA----------ATTTCCCCCAAGAGTTCCATCTAAAAAAA-----------------------------TGTTAGT--------ATCAGTTATTGGGAGTAGCAAGTATAAATCATCTCCTGTTTTATCCAGTGCAGTTCATTCACCAGGTAGAATAACTATGTTTACAGACATCTGTAGAAGTTAAATGCAACTGACGTAGC--------------AGAAATG----------AGCTGGGTTCCAACAGAGAGGAGA-----------GAAAGATT-GGCCAAGTCTCTGGTGACTTGAGCATAAC---TCTGGCAACAGTCTTTCTTAGAGGAAGCCAAAATCACATTGCTT-TCCAATCCACGTGCCCTTTGTGTGAATAAGCTGTTCCCGTTGAAGTACTGTGTGCAATGTAGTGTGACCTTC-ACCCTCCACTTCTCC-TCTAACTGAACTTTCCACACATA---TTTGTAGGAGAAGACCAGTGCCCTCAGTCTGAGCAACGTGGCAGGAGTCTTCTATATTCTCGTCGGGGGACTTGGCTTGGCAATGCTGGTGGCTTTGATTGAGTTCTGTTACAAGTCGAGAGCTGAGGCGAAGAGAATGAAGGTGGCAAAGAACGCACAGAATATTAACCCAACTTCCTCACAGAATTCACAGAATTTTGCAACTTATAAGGAAGGTTACAACGTATATGGAATCGAAAGTGTTAAAATTTAGGGGGTAGGAACGAGGTTCTAATACAACCTATCAAGTGCACGCTGTAGCTTCATTGTTGTGTTTTTAAGCTA--TGGAATGAGGGATTTGGCCTAGGGGTCATTTTGTATA-ATTGTTGCTGTTCTTTCATGTTGCTGGTCAATCGCTAGTGGAATGACCAATTGTTGACT---------------GCAAGTCTTTTGATGAATGTGAGTCG--TCCTGGCATAGATGTGCTTCACTAATTGTAGCCCAGCCTTTGCTTTAAGTGTTTGTTTTCATTTGCTAAAGGCTTTCTTAAGGAATTGTGAAAAGATCTGATTCTCTTCTCACTTACTGTACAGTAAATCAAGAGTAACCTCATTGAAGTCAATGGAGTTACAGTGGTGCCAGCTTGATGTAAGCAAGAAGAGAATCAGGCCCTCTGTCTCAAACACTGGATTTCTGTAATGTATCATTTTATTTTTTTTTTCTCTTTC---------TTAAGATGACCTTGAATGATGCCATGAGGAGCAAGGCAAGGCTGTCGATTTCAGGAAGTACTGGAGAAAATGGACATGTTATGGCTCCAGAATTTCCAAAAGCAGTGCATGCAGTACCTTATGTGAGTCCTGGCATGAGAATGAATGTCAGTGTGACTGATCTCTCGTGATTGATAAGAACCTTTTGAGTGCCTTACACAATGGTTTTCTTGTGCGTTTATTGTCAAAGTGGTGAGAGGCATCCAGTATCTTGAAGACTTTTCTTTCAGCCAAGAATTCTTACATTTGTGGAGTTCATCTTGGATTATAATGAATGATTAATTCAAAACACAACACCATTTTCTACACAACTTCAAGATGAAGCTTGACTGACATGCACAGCTAACATGGAAGTACTGTATTCTAACTGAAGTCGTTGTACAGGCAACACACCAGTTTCTGCAGCCACCGTTGTTAGTTCCTTGGTTCATATTGACTTAAGCATACTTGACATCAATTGCATCAAGATGTGACATGTTTTATAAGAAAAAAAAGAAAAAGAAACATTTAAAAATGAAAAAAAATATTTTTAGGTATTTTCACAAACAAAAACTGGCTTTTAAATAAATTTGCTTCCATAATGGTTACATATGACAGATAAAAAGAAACAAAGGAATCTAGACTGCGGGGAAGTGGAATATTGAAACAAGGCTTAAGGCATCCGTTCCATATTTTTCAAAGCCAAATATGT-AATGTTGAGAAGAGAAGAAATAATAATTAGGAGGTTCAAATCTTGTAATTTAGTATTGTTATTAAAATTTTGCTGTATATCCTATTCTTTAACATTTGGTGTTAATATCAAATTACTTGGCAATGCTTGACATTTGAAATAAAC-TTTTTCTATGGTTTTATTTGCAAGTGTTCC-ATTAATTTTAC-TAGCTACAGTTAGATTATAAA------GAGTCTAAAATGTAAAAGGACACTGTCAAGGTTGGGTTAATATTTTAGATTCTGACAGTGTCGCTATTCCCAGCTCATTTGAATCAGTTCAGCTTTTTTTTCTGTGGATGAACCCAAGCTGTGATGCTCAAATACGCATTTTGAACTCTGAAGAACAAGGTTGCTCTGGGTTGGAGTGGTACTTCATACCAGCACATGAGGAGTCAGACAGGTGCTGATTCAGAATCCAGCTCCTCTTAAATCTGACGTGCAGGGACTTATGATCCAAAGATTTGGTTCATATCTATCTGTACTTTTGTACATTTTTGTTAAT----AAGT-----ATCTGTACAGACAGAGGAGACTATCGGTAAAAAATTGATAAATTGCAAGCACCAGAAGAGTGTTAAATGTTTTTGTTTTT----CTTTTAAG--TATGAAACAAGAACATCTCAAAATTGTTTCTTGAAGGAAGCAGTTTTCAAACTCTGAAAAGGTAATTCCAAGCAGTAGCTAGTAAAGTTCTTTGCTAAGAGAAAAAAAAAGAAAACCTTGGCAATGTCTTTTTAAATTAAGAATGATGACAACAGATTAGATGCAAGTCTGTAGTGATGAGAAAACATAAAAATTGTCAAGAATCTGAATAATAAATATTCTT--------TGCAATCTGGAGTTACCGTACattt---ttaattatatata---tttaaGGATGATAGCTCTGTTTACAAAGCAAAAAGGAATCTTTAGAGGGATGCAATAACATTAATTCAA-ATGCTAAAGCAGATTGAAGTAACAGAAAATTTCTCTAGCTTTCCCTGTAGATAAAATAACC---ATGCATTTGGTTGAAAAGCTTA------CAATTTTCTGCATTGTGGATACATTGCCTCATGCAGTCTCAATAAATCTGTATTTTATCCTGGACTTACTTAA-GTAAGATT-----TGATACATGACTTGCAGT-TTTATTCTGAATCCATTTCTTAGGCTTAAGTAAAATATTTCTTGAACACTGCAGAAGACAGAGCATTTCTCTGAAACTAAATCT--------GTTCTTGTGGTACAAGCT--CTGAACTTGTTTC-------TGCAAGCACACTGTATACTCTCAGTGCAGTCAGCA---------AAAAGAGGTGTATACGGTGTTTTCAGTACAAGACAAAGCTACCAGTAACTTCTCTGTAATTAAACTAAACTATTTCT------AGATGCGTCTGTAAT-CCATATGTGTTCGGTGCATTACTCCTTATCAGGAATATTGGGGAATGCACTCTGATCTTTAACGTTCAATGCTAGAATGACCAAACTAA-----AATAATATTCATATGGTAATCTAAAC---TTCCTGAAAA-AAAGTAGAACTGCATTACCGTATACAGTGGAAAGCTATTTATTGTACCTCTGGGCTTATTCCTCTAAAAACTGTAGCGTACAAA---GTCTTTGTCAAGCCTGAACTGATGTATATAACTGAAATAATGTAAAGGTATATTTTCATGTTTTTATAATTAACAACATGATGAGAATACATAATGTAAGATTATTTCAATTACAGATAATGTGAATTGGGTAATACACAGCTCGGTTAAAAAGCAGTAATCATAGTTTAATATCCATGTTACAGTACATCAGTATATTGCTATATAAAGTATGTCTGTGTGCATTTAAGTGAAAAGTAGT----CAAGAGTGATGAAAGCTGTCCAAGGG-TTTTTTATTCATTTTATATGAAAATTGTTATGGAGCAACTAAAATGTTTATGAAA----CTTGTGTAAATTTCAAAATGTCCTTTACTGTAGCTTTTTGTTTACGGTACAGTATCTTATTTTCTGCTTTGTTAAATGAGTAACAGTACAAAGCCAGACATACACTTTCT-------------AAGACATTAACGTTCCTGTTTTTTCATGTATACCTATCTGACAGAAAATGCTTCTGATTTTATTTTTCAATCTGACACATGATGGCTTTTCTGGAGTGTTGTATAAACTTCAATCATACATAAAAAAAATCTTCTTAAAAAAGGCAAGACTTTTTATGTCTGTT------TAGTATTT ..:x...::.x..:.x.::.::.........................................:...x::.....:.....x....................:..x........:...x....:..............:.......................x..x.....:........:..:........:..:..:..:.................:..::................:........x...........................................................................................xx:x.x...-.:..........x................x.--------...:x....x..x.:--....x:.x::.x.:x.--------..:...x::..::...:......x::...x.:--..x.x:....x...:------------.x:.:x...----....x.x:x:...x..x..x::x...----..x:....:x::x..........x.:----.x.:...x...xx....-:...x...x..x...x:...:...:..x...:..-.:xx...x......:-----..xx.:x:x..x...----.:......x:.:-.:.....--..:........:..::x..........:.:.:........---:....:.....:.x.....x--------------------:....x.x.::..:.....:....x........x..........................................:................:............---................................................................................................x..........x.........................x......::x.....x:::.....-----------:x..x..:.:.........x.x......:..-............x.:..x::x------------------------..x.:........x...---------..x........:.:.......--.....----.........:.-....................................................................................................................................................................x........::...........:.........x.............:...........:x....xx-..x....:::.:.::.---------------....:x.......:x.:...----------------..:.x:x:.x.:....:x---:...:..:..:..:...:-------------.:...x:.xx:.x.x:x:.:x..x..:.:x...................................:..........................:..x:......:..x.........:.........:...........:..................................................................................................................................................................................................................................x..----...x.....x.:.....-x...x..........:....x.................x...........::....---.........:....xx..........:..x.:..............:..:..........x.x.-----------------......x:::......-.x...x.....x...x....-..:x.......x.x......:x..:........x...:x.:x...x::x..x.-....xx.:x:....::.:x::.:x...-------..x...x...:...::x.......x..::..:.:.....:...:x.:.......x......:..:x..::::..:x...:-:..:......x.x:.:...x....x...:..x.....x......x:......:xx..x...xx....:::x..x.x..:x.x..-:.x.:....------------------------....x...:.x.xxx.x..:.x..xx..--.:.xx:x........x.------...:.x.:.----------..x:..xx.:.x..xx.xx...-...::.:x...:.--....xx...x.--------------.:.....xx...x....x.x..x..:..:..---------------..xx.x.xx.xx.xx:...:.:...----------....-----..:.x..x.x....x..xx.-----------------------------...:..:--------..:.x....x..:x.x..x..x.:.xxxx:.:..:.x:....x:...xx.:.:.-----------.x.:x........x.x.xx.xx:...-----------.x..........:....--------------.......----------..:.x:x.:..x:...:x..xx..-----------:...xx..-:..:..:.:.:xx..x::..x.xx:..:.---.x..:x..::.x.:x...x....:..::.-------.....:..-..x...:..x:...x:.:.......x..:.:.........x:x.:.:..:....xx..-.:x...xx:....-.::.x...x..:x..-..:x.x.:.x..:.:.x..:...---.:.x.....:.............................x..x.....x.....:..:..:........x.....:.........................................:..:..:........:x...................:..................x.......:..................................................x....................................:..........x..x.:x........:.-......:x......:..::.......x--.x:...:...:.xx.....x.x..:....::.....:-.......x:......:......x.::..:::.x:...::xx:xx.x:...:...:x.:.---------------:..:xxx:..x.:........:::x.--.....x....:x.......:.:..x......::...-......----.x......:............:.:......----------------....---------------------------------.::.....x..:x.::..:x...:---------------..x..:.-----------------------x:......xx.---:..:.x..xxx.::...:....x....:x....:...:.:..::..---------..............................:...............:...x........................:.......:.............x..............x..x.....:...............:............................................................................:...................................................................x..x................:...:...x............-...........:.x........x.:.x..xx...::....x..::x...........................:..x.:..x........x........:.....x...x..............::........::....:......x...........:............:.........................----........:....:............x.---.............................--...............................x.....:x...x....:.x.x..xx....x:..-------------x........:.----.:...x.......x...:...x:...........................-....:.:..:.:..x.-----..:..xx.....:...x..............:..............:...:x..--...............................x...................................-.........x......-.........x...-.........:.-...........x.:.:.....------....:....---------......::....x.---....:xxx:::...----..x.:.x..-----....------...x..xx..x:...x.xx......-----------------------------.x.:.:.x.:.x:x.:.::...------------------------------.x...:.x.x.:.--------------------------------------....---.:....:..-------------..:...x..-------....x...x.:x.------x.x..x........:----...:-----....:.::...:.:.x.xx.x..xxxx......::.:..-.x.x:...::.......x.-:..x..:---..:::.....----:x...:..--..:::..x.::.....-...--------.:..:..x....:.:----x...:x.:xx:..:.......:-----x...x...---------....:x.xx..xx...xxxx....x..---x...:.x......:x..x.:...x..:.x.:.x.----------------------.x.x...x:x..x.x...:.---....:.x.-----......x:..--------......x.--....x.xx:x....x---.:.....x.x...---:.x.x:x..x..xx:.x.:....:--------------..:.:..:x..----...::.--..x..:..-....:x.:xxx.:x.:..:.:x.---.x......x..:....:------..:x...x.:..---..x:..:.:...:.x:.::...------.x..:..::x.x.:----...x.x.:....x.--.x.::..x....x.:--------:..:::::...x....-x..:....-----....xxx....x.x..:.-x.....:.x...x---..:x..xx...------:x.......x..------------.x.:...x...x.x.::x...x::.x.--------..x...x.::x...xx..--..x.x.x.:....-------x.x.:.x.x.x....x:x.:.x.---....x....---------..x.x:.:x.:..::...:.--------..x..:.--------------....---.x.:....:.x.:..:.::..------....x.xxxx.....-:x....:xx..::.......x.....:.........::...:.-:....:.:.:.x:.....::x.x.:................:.:x-----...x:.x.:.....x...x.:x...:---..::.:...:-:..:x....x..----..::......:.-x..x......................:..:..:........:......x..:x:.---x...:........:......:.....x....:...............x....................:x.-.........::..................x........:..::........x:.....:....:....x...:...-.x........x....................x..:..:.....:................-...............x............:..----............x.......:..:..-...................:....:.........:x:..:..............x----...:.........xx..x..............x:...........:...:....:.............x......:..:..:x..:xx:xx.:xx...............-------------....:...::x:..:.::x..........:...---.x..x............::............x.....:...:xx...........:...........x.................--....x..x......x.........::x.:.....x.:.x..------.....:.. 350M1D31M8I15M2I16M8I32M2D15M12D9M4D26M4D26M4I17M1D34M1I15M5I15M4I12M1I7M2I40M3D20M20D106M3D157M11I31M1D21M24I17M9I21M2I5M4I11M1D230M1I16M15D20M16D18M3I18M13D368M4D17M1D56M3D64M17D16M1I20M1I53M1I27M7D80M1I84M1I9M24D28M2D17M6I9M10I22M1D13M2D11M14D31M15D25M10D4M5I20M29D7M8D54M11I26M11I17M14D7M10D24M11D8M1D29M3D29M7I8M1D58M1I13M1D15M1D23M3D296M1I27M2D37M1D59M15D26M2D36M1I6M4I30M16I4M33I24M15I7M23I11M3I46M9D323M1I198M4I28M3I29M2I64M13I11M4I50M1D16M5I54M2I67M1D16M1I13M1D11M1D21M6D9M9I14M3I14M4I9M5I4M6I25M29I22M30I13M38I4M3I9M13I9M7I13M6I15M4D4M5D39M1I19M1I7M3I10M4D8M2D16M1I3M8I15M4I22M5I8M9I27M3I34M22I20M3I8M5I10M8D8M2I15M3D13M3D24M14I11M4I6M2I8M1D23M3I17M6I12M3D22M6D14M4I14M2I15M8I16M1D8M5D18M1D13M3I11M6I12M12I27M8D18M2D13M7D23M3I9M9D20M8I7M14I4M3I21M6D15M1D43M1I45M5D26M3D10M1D12M4I12M1I55M3D71M1I76M1I60M1I31M4D26M1D55M4D110M13D33M3I85M2I41M6D8M 4587/5799 79.1% 6401/94230402 0.0% 1038/5799 17.9% 134782385 55432170 +5911 chr4 + 190214555 157360991 157360990 157361129 139 TATGTT--TTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAG chr4 + 94230402 22579125 22579124 22579265 22579125 22579124 22579265 141 TATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAG ......--..x:.::x.x.....x:x.:..x..:..:......:.:.....x.:...:......x.x..:.....::......................:.....x..:..:..x:x.::..:xxx..:xxx:........ 6M2I133M 98/139 70.5% 141/94230402 0.0% 2/139 1.4% 134781866 55432689 +5911 chr4 + 190214555 157361517 157361516 157361657 141 TATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAG chr4 + 94230402 22578639 22578638 22578777 22578639 22578638 22578777 139 TATGTT--TTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAG ......--..x:.::x.x.....x:x.:..x..:..:......:.:.....x.:...:......x.x..:.....::......................:.....x..:..:..x:x.::..:xxx..:xxx:........ 6M2D133M 98/139 70.5% 139/94230402 0.0% 2/139 1.4% 134782878 55431677 +3510 chr4 + 190214555 157380848 157380847 157380917 70 CGTGGTGGTGCTTGCCTGTAATCCCAGCTACTTGGGAGGATGAGGCAGGAGAAACACTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.......x:.--....:.:...........::...x....x.xx.x...:.............:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 81347651 NA +4022 chr4 + 190214555 157394958 157394957 157395219 262 AAATCCCAACAAGATTTTCTCTAGAATAACTAAGGTTATATTAAAATTTACATGGAGGGAAAGTAGAAAGGAAGGGTAGAAAGGAAGGAAGAA-AGATGGGAGGGAGGGAGGAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAAAGAAAGAGAAAGAGAAAGGAAGAGAGAAAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGA chr4 + 94230402 49044601 49044600 49044813 49044601 49044600 49044813 213 AGATCTCATAAAAGTTTCTTTTGCACAACCTTAGGTAATATTGAA--TTACCTAAA----------------AGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGA--GAAGCACTAAGTGAGA---------------------AAGGGAAGAGTTAAAGAAAGAA-----GAAAGGTGAAAAATGAAAGAAAA----GAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGA .:...:..xx..::...::.:.:x.xx.x..x....x.....:..--....x.::.----------------..:x..:.:..:..:...x..-....x:.:..x:.xx..:...:x...x.:x..--....x.xx..:x....---------------------..:.......xx..........-----..:.::x...:..x.........----.......x...:x....:.xx..:.xx.:...:..::.:..x.. 45M2D9M16D21M1I32M2D16M21D22M5D23M4D44M 143/212 67.5% 213/94230402 0.0% 51/212 24.1% 108350357 81864198 +4560 chr4 + 190214555 157395059 157395058 157395261 203 GGGAGGGAGGAAGGAAAGGAAGGAAGGAA--GGAAGAAAAGAGA--GAAAGAAAGAAAGAGAAAGAGAAAGGAAGAGAGAAAGAAAGAAAGAGA-GAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 59372550 59372549 59372755 59372550 59372549 59372755 206 GGGAGAAAGTAATGCGAGG--GGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG .....::..x..x.x:...--.....x..--.....:...:.x.--.....x..x:..x.:x..:..:..::.x:.x.:x..x..x..::.:.:-...:::........:...x..x.:....:..:.x..x..x.:...::x:.:x:.x.:..:::...x..x:.x..:....:.x..x....::x:..xxx..x..::::.:.... 19M2D8M2I13M2I48M1I113M 124/201 61.7% 206/94230402 0.0% 7/201 3.5% 98022509 92192046 +3541 chr4 + 190214555 157395065 157395064 157395215 151 GAGGAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAAAGAAAGAGAAAGAGAAAGGAAGAGAGAAAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGA chr4 + 94230402 84536570 84536569 84536719 84536570 84536569 84536719 150 GGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAA-AAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAA .:.:....:..:...::..:x..x:..:.x.:..::x:......-....:.....:..:.......::xx.x.x.:x...:xx..x::xx.:.:x.xxx..:::.....x::.x....:.:.xx:.:..:....:.xx.....::x...:. 44M1D106M 87/150 58.0% 150/94230402 0.0% 1/150 0.7% 72858495 NA +3247 chr4 + 190214555 157395120 157395119 157395216 97 AGAAAGGAAGAGAGAAAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ......:.::..xx.x...:...:.......:.:.::x....:xxx....xx...:x::.:x.x.:.:.:x:...:.:...:..:......:.:.:. 97M 59/97 60.8% 97/94230402 0.0% 0/97 0.0% 106246741 83967814 +3105 chr4 + 190214555 157395135 157395134 157395188 54 AAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAG chr4 + 94230402 5788320 5788319 5788373 5788320 5788319 5788373 54 AAGAAAGAAAAGGTGAGAAAGGTAGAAAGAAAGACAAAAGACAAAAAGAGTAAG ..........::.x........x...........x..:.::x...:.:..x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 151606815 38607740 +3116 chr4 + 190214555 157395162 157395161 157395238 77 AGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGA chr4 + 94230402 38078778 38078777 38078853 38078778 38078777 38078853 76 AGTAAGAAAA-AGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA ..x.......-.:.............:..::.......x.x...::..xx:xx.x...:.:..x.::....:...:. 10M1D66M 54/76 71.1% 76/94230402 0.0% 1/76 1.3% 119316384 70898171 +3170 chr4 + 190214555 157395169 157395168 157395283 115 AAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAA-GAAAGAAAAGAAAGA----AAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 70762130 70762129 70762256 70762130 70762129 70762256 127 AGGGGAGGAAATAATAAAAGAAAATAAAGAAGTGAAAGATGGTAGAGATTTCAGAAATAGAAGAAAAATGAATTAAAGGACAATACCATGCTGAAGAAAAGGAAAAAAAAAAAAAAGGCATTAAAAA .::.:......x..x:.....:..x......:-......x::x.:...----.::..x::....:...x...xx....:.x:.x.-------...::....:..:...:...:....:x.xx..:.. 32M1I15M4I33M7I35M 77/115 67.0% 127/94230402 0.0% 12/115 10.4% 86633039 NA +3095 chr4 + 190214555 157395185 157395184 157395275 91 AAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 21986110 21986109 21986200 21986110 21986109 21986200 91 AAAGGGCAGAAAGAATGAAAAAGGGAAGTAAATGATAGAATGTGAAAAATAAAAAATAAAAAAACCAAAATAAACAATAAGACAGACATAA ....:.x........x....:.::::.:x:..x..x....x.x.....:x..:...x...:...xx..:.x.:.x.:x....x...x.x.. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 135409075 54805480 +3195 chr4 + 190214555 157395190 157395189 157395260 71 GAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 71601028 71601027 71601098 71601028 71601027 71601098 71 GAAGAGAGGAAGGAAGCAAAGAATAAATGAACAAAAGAGAATGAATATGAACATGAAAGAAAAGAAAGAAA .....:..:...:...x......x:..x...x:........x::.x.x:..x.x::..::........... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 85794162 NA +3007 chr4 + 190214555 157395194 157395193 157395249 56 AAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 78266968 78266967 78267023 78266968 78266967 78267023 56 AAGAAAACAAAGATTAAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAG ..::...x.....xx.:...:...:.xx:....:.......:.......:...... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 79128226 NA +3018 chr4 + 190214555 157395224 157395223 157395299 76 AAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .:..:.::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 116283046 73931509 +3237 chr4 + 190214555 157395236 157395235 157395317 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x......x:...:.:..x.:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 116283058 73931497 +3198 chr4 + 190214555 157395240 157395239 157395317 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x....:.:.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 116283062 73931493 +3678 chr4 + 190214555 157400941 157400940 157401012 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGGATTGCTTGAACCAAGGAGTTCAAAGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x.:.x::........x..:..:.:x::....:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 81367735 NA +3063 chr4 + 190214555 157470837 157470836 157470874 38 TTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTGAGTTT chr4 + 94230402 53703200 53703199 53703237 53703200 53703199 53703237 38 TTTTGTTTGTTTGTTTGTTTTGTTTTTGTCTAGAATTT .............................:.x..:... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 103767637 86446918 +3039 chr4 + 190214555 157486655 157486654 157486718 64 TTCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCCATCTCTCTCTCTT chr4 + 94230402 93986260 93986259 93986323 93986260 93986259 93986323 64 TTATGTGCAGCGATCTGTCTTCCCATCTATCTATCCATCTTCTATCCATGCACCTCCTTCTGTT ..x.:.x:.x.x....:...x:.:...........:...x......:..x..:...::...x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 63500395 NA +3063 chr4 + 190214555 157492087 157492086 157492150 64 TTTAATTTTGTCCAATATTGGAATTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGAGAT chr4 + 94230402 21794574 21794573 21794637 21794574 21794573 21794637 64 TTGAATATTCTCCAATATTGACACTGTTCTCTCTCTCTCTCTCTTTTTTTTTTTTATTAGGAAT ..x...x..x..........:x.:.x....:.::..:.:.:.:............x..x.::.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 135697513 54517042 +3220 chr4 + 190214555 157492108 157492107 157492176 69 AATTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAATCTCAATCTTGTTGCCCAGTCT chr4 + 94230402 22344083 22344082 22344148 22344083 22344082 22344148 66 AATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCTGACATAGAAACTC---CTTGTTAATCACTTT .....:x:...x......:.......:.........:...x..:...x...---......:x:..x.:. 51M3D15M 51/66 77.3% 66/94230402 0.0% 3/66 4.5% 135148025 55066530 +3286 chr4 + 190214555 157532742 157532741 157532824 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:.........:.::........x.xx.x...x::........x:.:..x.xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 81499545 NA +3705 chr4 + 190214555 157536784 157536783 157536884 101 TTATTTTAAAGAAAGTTTATGGATTTGTGTTGAGCCACATTCAAAGCCACCCTGGGCCACATGTGGTCTGCGGGCCATGGGTTGGACAAGCTTGATTTAGT chr4 + 94230402 45575654 45575653 45575752 45575654 45575653 45575752 99 tttttgtgaaaataacacaccaatttaggttG--CCAAATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGCAGTAGT ..x..x.:..:.x.::x:.:x:....:x....--...x...xx....:::x.......x...........:..::...........:.x..:..xxx.... 32M2D67M 68/99 68.7% 99/94230402 0.0% 2/99 2.0% 111961130 78253425 +3094 chr4 + 190214555 157542143 157542142 157542190 48 TGCTCTTTCTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGACAGA chr4 + 94230402 46054496 46054495 46054543 46054496 46054495 46054543 48 TGCCTACTCTTTCTTTCCTTTTTTTTTTTTTCTTAATTTTTTCACAGA ...::x:........................:..xx......x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 111487647 78726908 +3310 chr4 + 190214555 157543857 157543856 157543959 103 ATATATATACATATATATATACACACATATATATACATATATATACACATA----TATACATATATACACACACATATATATATATGTGTGTGTATATATACATATA chr4 + 94230402 21109195 21109194 21109301 21109195 21109194 21109301 107 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...:..:.:::.x.x.:.:x:.::.:x.....:...x:.:......x.:.:----.....:...:...x..::.x.x.:.:.........:..x....::.:::.:. 51M4I52M 64/103 62.1% 107/94230402 0.0% 4/103 3.9% 136434662 53779893 +3484 chr4 + 190214555 157543891 157543890 157543960 70 ACATATATATACACATATATACATATATACACACACATATATATATATGTGTGTGTATAT--ATACATATAA chr4 + 94230402 22600198 22600197 22600269 22600198 22600197 22600269 72 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAA ...:.:....x.....::.x...:..::.:...x.x....:.....x.............--..:..::... 60M2I10M 53/70 75.7% 72/94230402 0.0% 2/70 2.9% 134943693 55270862 +3692 chr4 + 190214555 157546434 157546433 157546507 74 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGTAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.::........x.xx.x...x..........:..x..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 81513230 NA +3298 chr4 + 190214555 157581671 157581670 157581828 158 CGTTTTTCAGAGATGATTTAATTAGCACATGTCA---TCTCCCAGCTCAGATATTTCTTCCGGAGTCACTTAGTCACTTAC-----TCCAAAAATCTTTATTTTTTCTTTCTTTCTTTCCTTTTTTTTTTTTTTTTTCTTTTTTTGAGACGGAGTCTTGCTCTTTC chr4 + 94230402 32307656 32307655 32307804 32307656 32307655 32307804 149 CACTTTTAGTAAATGAT-------GCATATCTCAAAATGTCCCA--TGAGCTATTTTTTCC-----CTTTTTATAACTCTCAAGTGTACAACAATCTTTATTCTTTCACTTGTTCATGTGTTTCCTTTTATTTTTTGCTTTTTTTAATACTGAATT---CTCTTTC .::....x:x.:.....-------...:..x...---.x.....--.x..x.....:....-----.x:..x:.x...:x.-----.x...x..........:....x:.:x...x.x:x...::....x......x........:.x..x..:.:---....... 17M7D10M3I7M2D15M5D15M5I70M3D7M 102/141 72.3% 149/94230402 0.0% 25/141 17.7% 125274015 64940540 +3071 chr4 + 190214555 157581752 157581751 157581797 46 AAAAATCTTTATTTTTTCTTTCTTTCTTTCCTTTTTTTTTTTTTTT chr4 + 94230402 28794620 28794619 28794665 28794620 28794619 28794665 46 AAAAATCTTCATTTTTTTTTTCTACTGTTCCTCTTTTTTTTTTCTT .........:.......:.....x::x.....:..........:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 128787132 61427423 +3478 chr4 + 190214555 157590445 157590444 157590587 143 ATTCTACTGAAAGCACTCTCAGTTGTTTGTTTGTTTTCTTTC--------TTTCTTTTTTTCTTTCTTTCTCTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTTCTTTCTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTTT chr4 + 94230402 63697093 63697092 63697239 63697093 63697092 63697239 147 ATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTC-----TCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:x.x..x:..:....:xx:xxx...:..:x.:.:.....--------.:..........:.:x..::...x....xx.....x.-..xxx:....x:..:..:x:xx........-----.:..:..:..:...:.......:..x... 42M8I37M1I30M5D29M 91/138 65.9% 147/94230402 0.0% 14/138 10.1% 93893352 NA +3071 chr4 + 190214555 157611943 157611942 157612121 179 TCTTGTCTTCCTTAGA---CTCCTGACAGTAGTCTCACTCCTCCAGAAG--CAGTAATAGAA-GGACGGGGCTTTCTTTGACCTGCAATATTT------CTTTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCT chr4 + 94230402 57371919 57371918 57372109 57371919 57371918 57372109 191 TTTGATCTTCCCTAGAGATCTTTCCACAAAAGCCTCCCTCCATAAAAATTCCAACAATAAAATGAACAGCAACACCTCCCACCCAAAGTTCTGTAAGAACATGCTGGCTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.x:......:....---..:::x...:x..:...x....x:x.:..x--..::....:..-.:..:.x:x:x:..::x...::x.:.x:.x------.x.x:.xx:.:.......:...x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x:.... 16M3I30M2I11M1I30M6I92M 105/179 58.7% 191/94230402 0.0% 12/179 6.7% 100240024 89974531 +3057 chr4 + 190214555 157612027 157612026 157612109 83 TTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...:.:...::..x.::..x....:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 100240000 89974555 +3287 chr4 + 190214555 157612030 157612029 157612154 125 CTTTTTCTTTCTTTCTTTCC-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTT chr4 + 94230402 19215424 19215423 19215553 19215424 19215423 19215553 130 CTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCT ......:...:...xx...:-----......x..::...x......xxx....x.x..::::xx:......:.x.:.:.:..x.:x..:..:xxxx:....:..xx:..:.....x:...x.x.....:. 20M5I105M 79/125 63.2% 130/94230402 0.0% 5/125 4.0% 138396606 51817949 +3247 chr4 + 190214555 157612033 157612032 157612137 105 TTTCTTTCTTTCTTTCC-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC------TTTCTTTCTTTCTTTCTTTCTTTCC------TTCTTTCTTTTCTTTTCTTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x..:..:..:..:.-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:------..x....:.:x.xx.......:...------.........:::....x... 17M5I43M6I25M6I20M 74/105 70.5% 122/94230402 0.0% 17/105 16.2% 93914915 NA +3426 chr4 + 190214555 157612034 157612033 157612133 100 TTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTT chr4 + 94230402 63697140 63697139 63697239 63697140 63697139 63697239 100 TTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:.:.....:......:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::....:.....:.....:x... 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 93914894 NA +4201 chr4 + 190214555 157612036 157612035 157612151 116 CTTTCTTTCTTTCCTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.....::-----..:.:.....:....:.:x..::.:.x....xx.....--...xxx:::..x....:.:x.xx..:....:..:::.............:......x... 18M5I38M2I60M 80/116 69.0% 123/94230402 0.0% 7/116 6.0% 93914919 NA +3636 chr4 + 190214555 157612052 157612051 157612161 110 CTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTCTT-----TCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTAA chr4 + 94230402 63697117 63697116 63697241 63697117 63697116 63697241 125 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAA ....x..:..:..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x...:..-----.....:::.::.:.::.......:..::.....x..... 18M5I42M5I11M5I39M 76/110 69.1% 125/94230402 0.0% 15/110 13.6% 93914935 NA +3115 chr4 + 190214555 157626893 157626892 157626939 47 TATTGTCCTGGGTTTTTTTGTTGTTGTTGATTTGTTTTTTTTTTTTT chr4 + 94230402 63738504 63738503 63738550 63738504 63738503 63738550 47 TATTATTCTTGGCTTTTTTGTTGTTGTTGCTTTTTTTTTTCTTCTTT ....:.:..x..:................x...x......:..:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 93888389 NA +3113 chr4 + 190214555 157656572 157656571 157656640 69 ACACACAAAAGAT-----TATATATATATATATACACACACACATATGTTTATAAGTAGATAAATGAAATTTAA chr4 + 94230402 74671060 74671059 74671133 74671060 74671059 74671133 74 ATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAATTAAA .:.:......:x.-----..........................:.::xxx.x..:...x....x:.....x.. 13M5I56M 53/69 76.8% 74/94230402 0.0% 5/69 7.2% 82985512 NA +15515 chr4 + 190214555 157706214 157706213 157706621 408 TTGTATAGTCTTCAGATTTGGTAGACAAGAATTACAAAAGGAAGTAAGCAAGATTAAAGGGATGAAAAAGTCACTGTGTTTAATGAGCACACATGGTGTTCTGTCATAACAAATTATCCCATGATGCTAATGATTAACTAGGCTGCCACTTGTTCTATAAGCTTACAGTATCATGAGCCAAGTAAGCACAATAGAAAACTGTCTACAAAATTTGAAGGCTATTTTAATTTCATATTTATCACCATCTTGTCATCTGTGATAACACTTCATCATACACGTGGCTCTTGCCTGGAGTTATCAAAATTAAAATTTATTTCAATAAAAGTGTTGTCGCTTAGTGCAAGACCAGTGAGGCAATTCAGTGCAACAAACAATAAGGTG-TACAAGTTAGAATGAATTTGTTCCAGT chr4 + 94230402 22695206 22695205 22695595 22695206 22695205 22695595 390 TTGTATAATC--CAGTTTC--TTGATGAGAATCACGAAGGGAGGTACATAATAT-GAAGGGATAAAAGAGAAGCTGTCTTCAGTGAGCACACATGGCTCTCTGTCATAACAAATTACCCTGTGATGCTCGTGATTAATTGTGCTGCCACTTGTTGTATCGCAGTGCAGTAATGCAAGCCAAATAAGCACAATGCAAGACTGTCTGAAAAATTAGTAAGCTTTTTGCATTTCATATTTATCACTGTC-TGCCAGCTGTGACAATCCTTCAGCATATATGTGA-TCTTGCCTGTGGTGTCCTGAATTAAAATGGATCGT----ATAGAGCCCTGGTTCAGCACAGGGCCTATG--------CAAGCTGACAAGCCAGAAGGTACTACAAATTAAAATGAATTTGTGCCAAT .......:..--...x..:--.x..::.....:..:..:...:...x::..x..-:.......:...:..xx:....x..:.:.............:x:.................:..::.......x:.......:.:x.............x...x:xxx.:.....x::::......:..........:x..:.......:x......x.x.:...x...xx................::..-..:..x......:..:x.....x....:.:...:-.........x:..xx:.x:.........xx..:x:----.x..x.::x.x.:.:..::..:.:..x:..--------..:xx::....:.x.x.....:-.....:...:...........x...:. 10M2D7M2D33M1D191M1D34M1D35M4D30M8D22M1I27M 281/389 72.2% 390/94230402 0.0% 20/389 5.1% 135011008 55203547 +3415 chr4 + 190214555 157725373 157725372 157725432 60 AATCTCCTCTCTCTCTCTCTCTCTCTCAGACACAGACACACACACACACACACACAGAGA chr4 + 94230402 75248045 75248044 75248104 75248045 75248044 75248104 60 AATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagaga ....::::....................x.....x.........x.x.x.x.x.x..... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 82477328 NA +3306 chr4 + 190214555 157725377 157725376 157725432 56 TCCTCTCTCTCTCTCTCTCTCTCAGACACAGACACACACACACACACACACAGAGA chr4 + 94230402 75248047 75248046 75248102 75248047 75248046 75248102 56 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagaga ....::.................xx.....x...........x.x.x.x.x..... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 82477330 NA +3167 chr4 + 190214555 157742914 157742913 157742970 57 TATTAAAGCATAATAAATGAAATACATTGGAATATAAAAGTATAGATATCCAAAATG chr4 + 94230402 35635339 35635338 35635395 35635339 35635338 35635395 57 TAATAAATAATAGCAAATGTAATACAGTGCAATATAAGAATATATATATCCAAGATG ..x....xx...::.....x......x..x.......:.:....x........:... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 122107575 68106980 +3099 chr4 + 190214555 157744140 157744139 157744216 77 ACCTTCTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAATTTATATAATGG chr4 + 94230402 4792636 4792635 4792712 4792636 4792635 4792712 77 ACCTTCCCTGTTGGGAAAAAAAAAAAACAACAACAAAAAACAACACAGAAGAGAAAGGTAATAAATAAATGTAATAG ......:..x:x:::............x..x..x......x..x:x.::.:......:x..x....xx..:....:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 152951504 37263051 +3035 chr4 + 190214555 157744159 157744158 157744208 50 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAATTTA chr4 + 94230402 90256089 90256088 90256138 90256089 90256088 90256138 50 AAGAGAAAAATAAAAGAAAAAAAAAGAAAGGTTCAAAGAACAGAAATTTA ..:.:.....x....:..............:xxx......x......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 67488070 NA +3517 chr4 + 190214555 157753449 157753448 157753579 131 GTGGCACATGCATGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGTCAGAGGTTGCA----ATGA-GCCGAGATCATGCCACTGCACTCCAGCCTGGCAACACCAGCCTGGTGAC chr4 + 94230402 76033201 76033200 76033328 76033201 76033200 76033328 128 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG----TGTGCCCTAAGCCTGC--TCCCAGCATGGTGAC ....::..:.--....:.:...........::........x.xx.x...x::...........:..::xx:..:..:.----....-...:..xxx...----..::.:.:.:x.:x..--:x.....x....... 10M2D66M4I4M1I12M4D16M2D15M 86/123 69.9% 128/94230402 0.0% 13/123 10.6% 81720248 NA +3316 chr4 + 190214555 157761113 157761112 157761191 79 GTGGCACATGCCTGTGATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGTCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--...::.::..........::........x.xx.x...x.......::....:..x.xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 81727912 NA +8131 chr4 + 190214555 157791335 157791334 157791929 595 CTCTGTCTGCAAGCACATTTTAAAACAGATTCTGTTGACAGGTGCAGCTCTGAAGACTACTTCATCTTCAGTGAAATTACACTGCTCTCCCACTCACATTCCTTCTTTTAAAATGGTACTTACACCCACTGTTGCCGGATGCTTTTATTATGCAGTGA---TTCAGCTAGTTTTTAATCTCTTGGCCTTTTCAGTAG-------GATGGTAGAATCACAGGAA-TTAGAGAT---GAAAATTATCAATTGCTTTTTTCATTTACATTGTTATACTT----------AAAAGTCAGCAACTTCCCAACAACATAGTTGAATAAGAAAGGATAGACCAAAATCCTCTGCCACGGATAATGAACTACCTACAGACCTGAGGGTGGGGGTGTGTTTTCTTTAGAAGAATTACCTGGTAAATATCACTATATCTTT-TATATTTTAAAT-TTACTCTCTTTTGGCTCAGCA---TGTATC-----CATTGACTTTATTTTGGTTAAATGTGTTGAAAAACAAGATAAACATCCAT---GAATTTTTCATTTGCAACCATTTATGTGTATAAGAAGTAACTTATTGATCTCCTAATTGAACAGTCATTGCTCACTCTCTATCAGACATGTCCTGCTAT chr4 + 94230402 22717546 22717545 22718124 22717546 22717545 22718124 579 CCCTTTTCGTAAGCACATTTTTAAACAGGCTGCAGTGACAGAAGGTGCTCTGCAGCCCTCTCCTTCCTTTCTGAATTCATGCTAGGCTCCCATCAACATCCTTTGCATTTAAATGA----------CACAACTGCGGGTCTTGCTCACTCCTCACTGAACATTCAACCTAATTTC-----CTTTGCCTTTTCATCAGTCACTGCGCTAGCAGCATAAAAGAAAATCAGAAGTTTGAAAAACCATT--TTTGTTTCTCCATCCAGATTGTTGCTGTTTATTCAGCACAAGGTTCTGCAGTTC-------ATGTGGCTGGATAAACAGGAATGGCCCACA-------GCAACACATAAGAA-----CTACAGAT---AGGATCAAGATACATTTTT------ATGATTTCTGGGCTCATGTCATTGTCCCAGTATAGATTTGAGAGGCTGTTCTATCT--GCTCAGCACTGTGCATTTTCGACATTGATTTT--TACATTGAAGCCTTTGGAAATGCAGTTTAACCAACCCTTGGGCATCTATCATCGACAACCATTTACGTG----AGAGATGATGTATTGGTCTGTTAATTGAACAATCATTGCCCCATTTTTATCACATATATCCTGCTAT .:..x.::.:...........x......::.x::x......:x.xx......x..x.:x..:.x..:.:xx....x.:.::..:xx......::x....:.:..x:x..x.....:----------...x::...x..x:x:x:.:.:.x:x..x...---....:.:x:x...:-----...x.........x:..-------.x.:.:..x..x.x..:..-.:...::.---:....::..:--..xx...:.:...::.x......::xx..----------..::x..x...::.:-------.::.:.:..:....:x.:.:..:.x...x.-------..x..:x....x:.-----.......:---...:.x::.:.:::....:------.x:...x.:x..:xx..:...:.:.x:.xx.-..x....x.:.x-:.::...x.:.--........---..:..:-----......:...--.x::x.x..::x.x.x....x:..:xx...x..x..x.---.x..:.x....:x:..........:...----...::.:.:x.....:...x:..........:.......:.xx.:.:.....x.:..:......... 116M10D32M3I14M5D17M7I19M1I8M3I10M2D29M10I15M7D30M7D14M5D8M3D19M6D31M1I12M1I11M2D8M3I6M5I10M2D38M3I28M4D67M 346/542 63.8% 579/94230402 0.0% 90/542 16.6% 135073789 55140766 +3080 chr4 + 190214555 157826395 157826394 157826460 66 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 81793194 NA +3061 chr4 + 190214555 157830337 157830336 157830393 57 ACATATATATATATATGTATATATATATGTATACATATATATATGTATATATACACA chr4 + 94230402 61270779 61270778 61270835 61270779 61270778 61270835 57 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .:....x.:..............:::.:...:...x.:.:x:.......x:...... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 96559558 93654997 +3090 chr4 + 190214555 157830349 157830348 157830462 114 ATATGTATATATATATGTATACATATATATATGTATATATACACATATATATATGTATACATATATACACATATATATACACAT-ATATATACATATATATATATGTGTATATAT chr4 + 94230402 76376858 76376857 76376972 76376858 76376857 76376972 115 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATAGAGAAAATGTGCCTCTCTGTGTGCTTGTTTACAT ..:::..:x.x.x..::...:..x.x...:......::.....x.xx..:x.:...........:.:..:...x.:.x.:.x.x-.x..:.:.x.x.x.:.:.::x...x..:.. 84M1I30M 71/114 62.3% 115/94230402 0.0% 1/114 0.9% 81453491 NA +3150 chr4 + 190214555 157830377 157830376 157830445 69 ATATGTATATATACACATATATATATGTATACATATATACACATATATATACACATATATATACATATA chr4 + 94230402 57351733 57351732 57351798 57351733 57351732 57351798 66 ATACGTGCAT---CACAGATATATACGTTTACAAATATGCACATACTTTTACACATAGACACACAAATA ...:..::..---....x.......:..x....x....:......:x.x........x.:.:...x... 10M3D56M 51/66 77.3% 66/94230402 0.0% 3/66 4.5% 100478644 89735911 +3002 chr4 + 190214555 157830404 157830403 157830470 67 TATACATATATACACATATATATACACATATATATACATATATATATATGTGTATATATATATAGTG chr4 + 94230402 66642211 66642210 66642277 66642211 66642210 66642277 67 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACAGTTAGTG .....:.......xx....x:......xx..:....:....:x....:::::..:...:.xx..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 91188193 NA +3271 chr4 + 190214555 157838860 157838859 157838939 80 TGTGTAAGAGAGA---TGGGATGGGAGGAAAAGAGAGAGAAACAAAGAGGGAGACGGGGGAGGTGGAGAGGGAGAGGAAGAGA chr4 + 94230402 75729040 75729039 75729122 75729040 75729039 75729122 83 TGTGGCAGAGAGAAATTGTAGATGGAGTAAAGGGGGGAAAAAAAAGGAGGGGGGGGGGGGGGATGGAAAGGCAAAGGGAGTGA ....xx.......---..x::xx....x...:.:.:..:...x..:.....:.:x.....:.:....:...x.:...:..x.. 13M3I67M 56/80 70.0% 83/94230402 0.0% 3/80 3.8% 82109820 NA +3160 chr4 + 190214555 157853493 157853492 157853551 59 AGAGTGAGACTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACACGAAAGTAAAGTA chr4 + 94230402 31996634 31996633 31996692 31996634 31996633 31996692 59 AAGGGGAGGCTTTTTGAAAAAAAAACAAAAAAAAAACAAAAAACCACCAAAGAGAAGCA .::.x...:..x...x.........x..........x......x...x....x:...:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 125856859 64357696 +3342 chr4 + 190214555 157862286 157862285 157862343 58 TGTTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTTTCTTTCTTTTTTTTTATTATACT chr4 + 94230402 69600836 69600835 69600892 69600836 69600835 69600892 57 TGTTTTTTTTGTTTGTTTGTTCCGTTTGGTTTTTTT-TTTCCCTGCATTTGTTATATT .....................::....x........-....::.x:x...:.....:. 36M1D21M 47/57 82.5% 57/94230402 0.0% 1/57 1.8% 88261450 NA +3155 chr4 + 190214555 157885359 157885358 157885477 119 AAAAAGAAAGAAAGAATGAAAGATTGAAGGAAGGAAGGAAAGAAGGAGGGAAAAGAGGGAGGGAGAAGGGGGGGAAAGAAGGAAAGGAAAGGAAAGGAAAAAGGAAAATGATAGATGTA chr4 + 94230402 92668944 92668943 92669062 92668944 92668943 92669062 119 AAGAAAAACATAGAAATGCAGTGTTGTGTGGCTGTAAGTGGGAAAGAGGGGAAACTGAGAAAGCAGTGGTGGGTAAGGAAATAAGGATGGTGAAGGGGAAAAGGAAAATGTTGGAGGCA ..:..:..x:x.::....x.:x:...x:x.:xx.x.:.x::...:.....:...xx.:..::.x::x..x...x..:...:x..:.:x::x...:..:............x.:..x.:. 119M 69/119 58.0% 119/94230402 0.0% 0/119 0.0% 65216415 NA +3266 chr4 + 190214555 157885400 157885399 157885473 74 GAAGGAGGGAAAAGAGGGAGGGAGAA----------------GGGGGGGAAAGAAGGAAAGGAAAGGAAAGGAAAAAGGAAAATGATAGA chr4 + 94230402 32265532 32265531 32265621 32265532 32265531 32265621 90 GAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGA ..:..:....:xxx:....:......----------------..::.::..:::....:....:...:.:....:.........:..... 26M16I48M 53/74 71.6% 90/94230402 0.0% 16/74 21.6% 125619868 64594687 +7508 chr4 + 190214555 157885559 157885558 157885967 409 AGAAGACAAATAGAAAGAGAAAAAAGAAAATACATCAAGGAGGAGTAGTGGCAACATGCCCTAATTCTGACTCCCCATTAG----------------AAAACAAGAA---ACTCTCCCACAAACAAAGTAATTCTCAATCTTGATTT---ATCTGCATTTTAGTGGAAAAAG--ATTTCAGTTT-TACCAGTGTCTTTCACAGACTGGGTATGACCCAATT-CTGCTATTCAGAAATAGTCCTCAGAATTTAATATTGCCATCTATTGCATTCATAGTCTG-TATATGTAAAAACAAAGGAGAAAATAATTCTGCAAAGGA----------AAATGCTGTATTTAATTAATGCCCAAGGGAAG----CTATGAAAAAGAAAAAAATTGTAGTTG---TCACGTCCTAATT---------TTAACCACTGTTTACCAGATTTATTTACATGTACTGCTCTAGC chr4 + 94230402 22751723 22751722 22752163 22751723 22751722 22752163 441 AGATGACATATAAATG-----ACAAATAACTGTATTTAGGAGGACTG---------TGGTCTAATTTTAACTTCCTTATAGTTACTCATATTTTCAAAAAACTAAAATTCACTATTCTAGCAATAAGA-----CTCTAT-TTGATTCTACATTTGCATACTAATGGACAAAAGTATTTAAATTCCTACAGATATCTGTTGCTGGCTTGATGAAGCCCAGCTGCTCCCTGTTAAAAATGGTGATTAGAAATTAATATAGCTATCCCATGCATTCACAGCTTGAGATTTGTAATATATAAAGA-ACAATCATTCCTAAAGGGGCCTTGCTTGTGAATGCTGTATTTAATTAATGCCCAAGGGAAAGAGCAGAAGAGGAGGAAAAACACTGCAGCTGAATTTATTCTGCAATTGTAGCAACGTTAAACACTGCATGCCAGATTTAATGGCATGTATTCATCTAGC ...x....x...:.x:-----.x..:x..x.::..:x.......x.:---------..x:......:.:...:..:xx...----------------.....x.:..---...x.:.:.xx..:..::-----...x..-......:---..:.....x:..:....x...:--....x.:..:-...x::.:...x.::.x.:..x.:.:x::....::.-..x.:xx.:.:....:..xx.:....x.......x..:...:xx........:..::..-x..x.....x.xxx..:..-.x...x....:xx..:..:----------:..............................:----xx.x..::.:......x.:..:..:..---.:.:x::x:....---------....x.....:x.:.........x.x:......:.xx...... 16M5D26M9D25M16I10M3I18M5D6M1D7M3I22M2I10M1I36M1I59M1I19M1D19M10I32M4I27M3I13M9I43M 265/388 68.3% 441/94230402 0.0% 74/388 19.1% 135133836 55080719 +8107 chr4 + 190214555 157889755 157889754 157890063 309 ACTATGAAAAGGGATTAA----TCAATTTTGTTTTTGTTTTTGTGATAATCTATTCTACTTTATTTATCATACTCTAAAATATATGTAATTATATTAGTAACCATATATG-TTGCTTTTTGACAAAGGACAATTTGACTGATTAAAAACCAGGCTGCTGCACTTAAATATGTAGC-AGTTACCATGGAAACAATTTTACTTTGACTCAGAGCATATCTTGTTTTAAAGAGAGCAGCCTGTTGTTATGGCAA-TGGGAACTTGAGCATTTTT---CCGAAAAGAAGACTAACGCAGGATAGATAATAGTGTTGCCAGTTA chr4 + 94230402 22756383 22756382 22756672 22756383 22756382 22756672 290 ACTCAGGAAAGAAATTAAAGGTCTGATTCTTGATTAATTTCTGC--------ATTCTCCTCTCTTTTCCATATTTC-------------TTGTGTAGGAATGCCTACATGGTTTCCTTTCAAAAAGGGGCAATTTGCCTGATTAAA--CCAGTCTGC--ACTTTAAATACGCAACCAGTTACCATGGCAACAGTTTTACTTTGACACATAGCTTATCCTGTTTTAAGTAGTGCAGCCTGTTGTTATGGCAGTTTGGAATGCCACTATTTTTTTCTCCAAAAGAAGCACTACACA----AGATAATAAGCCCCCCAGTTA ...xx.:....::.....----:::...:.xxx..x:...:..:--------.....x..:.x...x:....:.::-------------..:.:.x:.x.xx.x..:...-..x.:...::.x..:..:.......x.........--....x....--xx:.......:.:.:.-...........x....:............x..x...x....:........:x..x...................:-.x....:x:x.x:......---:.x........xx:x..:..----........:xx::x....... 18M4I22M8D24M13D21M1I35M2D9M2D16M1I75M1I19M3I20M4D21M 202/280 72.1% 290/94230402 0.0% 39/280 13.9% 135133372 55081183 +8179 chr4 + 190214555 157911839 157911838 157912470 632 AGAAACCATATGTC------AGCTTCCATTCTGA---------TTCTTTAGATAATCAAATTTGGAGTAAAGGGAGTAAAATTAGCTGCTAATAAATTAAACATGACTAGTATCTCATATCTTGAGACAGACCGAAGAACACATCCTATCCATTAAGCATTAGCAGTGAAAATGAAGAAAGAAAATAATT-TGCAGAGTATGTCACAACA----------------------AAATAGTTCAAACCTATCCTTAGATTTATGAGATGTCTTCCTCTATACTTTATTTATGAATCAAATCCAAAATGCATGAAGA------AATTACTTGTCAAGGGTATCGTGGAGGTAAATCGGATCTTTTTTTCTACTGCTATCTGCCCCACACAGGCAGAATGAAATCAGCTTCCTACAATAGTTCTAT-------AAACAGATCCATCCAGCATATGCAACTTACTGACAACAAATCAATATGCTTTTTGGATTCGCATCTGACAAAGCTTAATAGCAAACAAAAGATAATATTTCTCTGAAACAATTCTATACAATAGTACAAAAG-------------ATCTTTATCAAGCTTTTCTTTCTAAATACCATTCATATCCTACCTCTTTCAAAAACGCTGACATTCTGCAGATATCCTCT-GATATAATCTCTATAGGCTCCAAATAGCTTAAATTTACTTGT chr4 + 94230402 22764154 22764153 22764803 22764154 22764153 22764803 650 AGAAATGTTATGTCTGTAAGAGATTTCCTTCTGAGTAGAGCCATTATCTATGAAAGAAAATTGAAGTTAAAAGGTATTATGT--------AATAAACTGGCCATGACTAATAATTCAGATTTTTTTGAGTTCTGAATAAAACTGACTTTTTGATTAGCATTGGTAGCAGAACTGAAGGAAAGATGTGGGTGTACAAATAAAAACCCAGCATTTTTAATCATGGCCCCAGTGGAAATAAT----GATTACTGCTGCGCTGTTGAGATATTC----CTATTCTTCATGTATAAATTATATGCCAACTGCTCCAGGAGAGTCCAATTATTTGGCAGGG----TGCTGAGTTCATGAAGTTCCTTGTTGGAAATGCAGTCAGAGTAAGGAAAATAGAGTGAAATCAGATTCT-------GTACTCTCAAGATAAAACAGATCTGTCCAGTACATGCAGTGTACTGACAACAAATCAAT-TTTGTTTTGGATTCAGAACCAACAATTTTTAATAGCTGACAGAAGATAACAT----------CAATGTTTTGAAGTAATGAAGGAGGCAGCATGATGGAATTTTTATTGAGTCTTAATTTGAAAATAAAGTTC----TCTGTCTTTTGAAAAA----TAGCATCAATCAGATAGGCTTTAGATGTAATCTATCCAAAA-CAACATAGCTTAAATTAATTTGT .....:xx......------..x..:.x......---------..x.:..x:x..xx.....x:::x....:..x:.x.x:.--------......:.::x........:..x:...x..:..xxx:x:xx.:...x..x..xxx..x.:::x.x......:.:..:::..x.....:..::.x:.::x.-.:..:.xx.x:x.x..:..----------------------.....:.----:x:..::x:.:x::.xx......:.::----....x...:..x...:...:.x..x.x..x...x:x.:..------.....:...x..:..----:.:x...x.x.xxx:.x..:..x..xxx.x...x:..x.xx:x.x:x.:::...:.........x...:-------..x..x.-------.........::.....:.:.....::x..................-.x:x..........:x.x.::....xx:........x:...:.......:..----------....x:.x.:x.:..:.:x.::..-------------..:.....::..::..xx...xx.....xx:...----:..::..:..xx....----.::...:xxx......xx..:.-...:......x.x:.::x-.x.x............x.:.... 14M6I14M9I39M8D100M1I19M22I7M4D27M4D40M6I15M4D69M7D7M7I45M1D52M10D24M13I34M4D16M4D22M1I18M1D23M 371/585 63.4% 650/94230402 0.0% 112/585 19.1% 135147685 55066870 +3710 chr4 + 190214555 157955785 157955784 157955896 112 TATACATGTGTGT------GTGTATATATATATGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGTATATGTATATATATGTGTGTATGTATATATATGTATATG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATG--------TACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG .............------.x.::...x........:x:.:.....:x:....::x....:..:..--------..:x:..::x.x.:.:...:........x....::...:.:.:. 13M6I47M8D44M 72/104 69.2% 110/94230402 0.0% 14/104 13.5% 136846591 53367964 +3011 chr4 + 190214555 157955793 157955792 157955857 65 TGTGTGTGTATATATATATGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx.:....:.:x.:x.:x..x............:...:.......:::..:....:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 130630301 59584254 +3110 chr4 + 190214555 157955807 157955806 157955858 52 TATATGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGTA chr4 + 94230402 65759986 65759985 65760037 65759986 65759985 65760037 52 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTA ..x..x.:.:x:...:..........:...:....x........:....... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 92195821 NA +4019 chr4 + 190214555 157955808 157955807 157955956 149 ATATGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGTATATGTATATATATGTGTGTATGTATATATATGTATATGTATATGTATATATGTGTGTATGTATATATATATGTATGTATATA-TATATGTATGTGTATA chr4 + 94230402 21109179 21109178 21109328 21109179 21109178 21109328 150 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ...x.x.x..x.::x...:::.....:.x.x....x.:....x........:x:::.....:x:....::x.:..::...:.::x:...:x.x...:.........:.:x:...::..::.::::x.xx..:.-.x.x...:x.....:. 133M1I16M 89/149 59.7% 150/94230402 0.0% 1/149 0.7% 136846629 53367926 +3548 chr4 + 190214555 157955809 157955808 157955918 110 TATGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGTATATGTATATATATGTGTGTATGTATATATATGTATATGTATATGTATATATGTGTGTATG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...::..:.:.:.x.x....x.:....x...:...::x:.:.....:x::.:.::x....::.:...::x::.::x.x.:.........:....x....:::..:::.:. 110M 64/110 58.2% 110/94230402 0.0% 0/110 0.0% 136846615 53367940 +3308 chr4 + 190214555 157955811 157955810 157955872 62 TGTATATATATATATGTGTGTGTATATATGTGTGTGTATATATATGTATATGTATATATATG chr4 + 94230402 86633930 86633929 86633991 86633930 86633929 86633991 62 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..::.:::..x:...:...x......:...:...........:..x.:....:..x.:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 71321881 NA +3151 chr4 + 190214555 157955819 157955818 157955912 94 TATATATGTGTGTGTATATATGTGTGTGTATATATATGTATATGTATATATATGTGTGTATGTATATATATGTATATGTATATGTATATATGTG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATAT----------GTAAATACATGTTTATGCACACATACACACATG ...x:..x.....x.:.:.:.........:...xx.....x:::..:....----------...x...:....x....:.:.::..:.:.::.. 51M10D33M 58/84 69.0% 84/94230402 0.0% 10/84 11.9% 72121286 NA +3089 chr4 + 190214555 157955831 157955830 157955900 70 TGTATATAT-GTGTGTGTATATATATGTATATGTAT--ATATATGTGTGTATGTATATATATGTATATGTATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .:..:....-.......x...:...:::....::.:--......x....:.........:.x....:.::.:. 9M1I26M2I35M 52/70 74.3% 73/94230402 0.0% 3/70 4.3% 101088540 89126015 +3004 chr4 + 190214555 157955840 157955839 157955902 63 GTGTGTGTATATATATGTATATGTATATATATGTGTGTATGTATATATATGTATATGTATATG chr4 + 94230402 86633929 86633928 86633991 86633929 86633928 86633991 63 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ...:...::..x:...:.:.x......:..::........:..:..x.:.:.::..x.:.... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 71321911 NA +3425 chr4 + 190214555 157955853 157955852 157955934 82 TATGTATATGTATATATATGTGTGTATGTATATATATGTA--TATGTATATGTATATATGTGTGTATGTATATATATATGTATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x:..x...:.x.:.:.......:...:...xx.....--:..::.......x...::...x....:.:.:...:.:::... 40M2I42M 57/82 69.5% 84/94230402 0.0% 2/82 2.4% 72121320 NA +3032 chr4 + 190214555 157955873 157955872 157955939 67 TGTGTATGTATATATATGTATATGTATATGTATATATGTGTGTATGTATATATATATGTATGTATAT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.::..::.:::..x........x.:.:..:..::........:..:..x.:....:..x.:... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 71321949 NA +3166 chr4 + 190214555 157955936 157955935 157956002 67 ATATATATATGTATGTGTATATATATATATATATGTATGTGTATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.:.::........:x::.:..:.x:........x......:......:xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 111892637 78321918 +3518 chr4 + 190214555 157984598 157984597 157984687 90 GTGGTGCACACCTGGAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATAGCTTGAGCCCAGGAGTTTGAGGCTGCAATGAACCATGAT chr4 + 94230402 76033201 76033200 76033285 76033201 76033200 76033285 85 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG---TAGAACATGAT .........:--..x...:.........::::........x.xx.x.:.xx:.....:.....:..:..x:.....---.::.x...... 10M2D64M3D11M 62/85 72.9% 85/94230402 0.0% 5/85 5.9% 81951397 NA +3857 chr4 + 190214555 157994308 157994307 157994390 83 CATGGTGGCTTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGGATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:...........::........x.xx.x.:.x::...........:..x.xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 81961111 NA +3170 chr4 + 190214555 157994631 157994630 157994683 53 TTTGTATATATATATTTGTATATATATGTATATATATTTGTATATATATTTAT chr4 + 94230402 84739102 84739101 84739154 84739102 84739101 84739154 53 TTTGTATTTACATAATTATATATATATGAAAATACATTTGTATAAGTATCTAT .......x..:...x..:..........x.x...:.........x:...:... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 73255529 NA +3348 chr4 + 190214555 158022078 158022077 158022147 70 CACCTGTAATCCCAGCCACCTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGC--AGGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCA-GAAGCTTTGGGCTGTAG ...x....:.:.....:..:..::........x.xx.x...x............-.....--x......:.. 54M1D5M2I10M 55/69 79.7% 71/94230402 0.0% 3/69 4.3% 81988871 NA +3147 chr4 + 190214555 158052439 158052438 158052483 45 GTATTTTTTGTCTGTTCGTTTGTTTTTAGGGTTTGTTTTTGTTTT chr4 + 94230402 34521142 34521141 34521186 34521142 34521141 34521186 45 GCATTTTTTGTTTGTTTGTTTGTTTTTTGGGTTTTTTTTTGCTCT .:.........:....:..........x......x......:.:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 123531297 66683258 +3090 chr4 + 190214555 158067338 158067337 158067386 49 TCTATTTCTATTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTGAGAGGGA chr4 + 94230402 13302252 13302251 13302300 13302252 13302251 13302300 49 TCTGTTTGTTTTTTTTTTTTGTTAGTTTGTTTTTGCCTCTTGGGAGGGA ...:...x.x......x......x...........::.:...:...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 144765086 45449469 +3115 chr4 + 190214555 158073020 158073019 158073097 78 GAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 86089085 86089084 86089162 86089085 86089084 86089162 78 GAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAG ..::.::....:.:x.x...:..:...:...:.....x..:.:..:x..:x:.......:...x..x..:::x.:... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 71983935 NA +3180 chr4 + 190214555 158073042 158073041 158073169 128 AGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAA------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------AAAATAAGAAAAGAAAGAAAGAGGAGGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAG--AAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........:--...xx.x.....................x.:------....xx:..:x:::.x.x::..::x..:.....:...:::.:..:..::..x..------:..::.x...:::.::..:x.x.xx....... 9M2D31M6I54M6I32M 81/126 64.3% 138/94230402 0.0% 14/126 11.1% 106924663 83289892 +3519 chr4 + 190214555 158073046 158073045 158073174 129 AGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAA----AGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA---TAAGAAAAGAAAGAAAGAGGAGGGGAGGGGAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ........::..xx.x.............:.:.:.:.x....----....--::..x.:..x.x:..::.x:...:.:...:..:....:::..::.x.:x.---.:.::x.x...:...:.::.x.x.xx....... 42M4I4M2I50M3I33M 83/129 64.3% 138/94230402 0.0% 9/129 7.0% 106924667 83289888 +3229 chr4 + 190214555 158073064 158073063 158073144 81 AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATAA chr4 + 94230402 41112178 41112177 41112258 41112178 41112177 41112258 81 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA ..::.::.......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:..::.... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 116960886 73253669 +3014 chr4 + 190214555 158073072 158073071 158073153 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATAAGAAAAGAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x.x.:..::.x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 116960894 73253661 +3086 chr4 + 190214555 158073083 158073082 158073200 118 AAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATAAGAAAAGAAAGAAAGAGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGG chr4 + 94230402 8397462 8397461 8397579 8397462 8397461 8397579 118 AAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAA--AAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGTAGAAGGG ...:...x:...:....:.--....x::::...:.x...x..:.x..:::x.::.:....--..:x....x.x:.....x.x....x:.::..::.xx:...:::.:....:x:...... 19M2I39M2D58M 71/116 61.2% 118/94230402 0.0% 4/116 3.4% 149675621 40538934 +3023 chr4 + 190214555 158073099 158073098 158073194 96 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATAAGAAAAGAAAGAAAGAGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGG chr4 + 94230402 78784176 78784175 78784271 78784176 78784175 78784271 96 AAGCCAACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGGTGG ...xx.:x..:.::..xx..::.....x...:x.:.:......x.x:...x........:.:.:x::x.xx......:..::....x..::.:x.. 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% 79288923 NA +3028 chr4 + 190214555 158073179 158073178 158073262 84 GGGAGGGAAGGGAAGGGAAGGGAAGGGAGGAAGGGGAGAAAGAGAGAAAGAAAGAGAGAAAGAAAGAGAAGGAAGGCAGGAAGC chr4 + 94230402 65363859 65363858 65363942 65363859 65363858 65363942 84 GAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGC .::..:.....:x.xx:...::..:x:.....::.::....x.x......:..xx...:....:.x::..::.x.::....... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 92709320 NA +3170 chr4 + 190214555 158078528 158078527 158078578 51 TTTTTTGTTTGTTTGTTTGTTTTTGAGATTGTGTCTTACTCTGTCACCGAA chr4 + 94230402 34521145 34521144 34521195 34521145 34521144 34521195 51 TTTTTTGTTTGTTTGTTTGTTTTTTGGGTTTTTTTTTGCTCTGACATCAAA ........................x:.:..x.x.:..:.....x..:.:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 123557383 66657172 +3100 chr4 + 190214555 158107034 158107033 158107147 114 CTATAGATATATATATGGAATAGATAGATATCTATAGATATATATGGAATAGATAGATATCTATAGATAT--ATATATGGAATAGATAGATATCTATAGATATA-TATATGGAATAG chr4 + 94230402 23578261 23578260 23578369 23578261 23578260 23578369 109 CTGTAGGAATATATATGGAATATATAGAAATATATGGACATAAATTGGAAAGATAAA-------AGATACTGAAAAAGAGAATAGGGAGA-AACTACAGTAATACTATACAATATAG ..:...:x..............x.....x..x...:..:...x..x.:.x.....:.-------.....:--.x.x.x:......:x...-.x...:..xx...-....:::x.... 57M7D6M2I18M1D13M1I12M 78/106 73.6% 109/94230402 0.0% 11/106 10.4% 134528773 55685782 +10565 chr4 + 190214555 158110881 158110880 158111250 370 TACAACTGGTAACAAGAGTGCAAAAATAATATTTCAATCAAAGCAATGCTAT--CAAATTTTATGAAGTATCACTTTTTGGTCATGAAAATAAACTTTTTTATATGACTCTGAATGAAAGTAAGAATTCTTTTC-ACTACAGAGCTGATTTTATATGAGTTTAAATCTGTT---CTTTGTTTTTTCTAATCTCTTGCTTTAAAACACACTAACTAATGAGTTGACCAA-GCTCTACTGGC-CATTATATCTACTTGCAAACTAGCA-----AATTCAGTTTTCAACATAACAACAC--AAAGTAAAATGAAGTGGAATGCTGTGATTTTAAGGGGGCTTTGCCCTCCTTTGTTCTGTGAACTTTGCCAGCTTTCACATCATAGCA chr4 + 94230402 22834482 22834481 22834864 22834482 22834481 22834864 383 TAAAGCTGACAGCAGAAAATCAAAGA-AATCTTAGCGCTAAGGCAACAGTGTAACAGAAAATATATGTCAGCTCTCCATGCCCATGCAGATTATCACTCAGATAAGACTGTGATAGAGTTTAAGAATTCTTTCCCAGTACAGTGTTGATACTGCA-AAGCTTTAATCTGTTGTTCTTTAGCTTTTTGGATCTCTTGCTTCAGAACACAAACACTAACTAGTTGACAAAAGCTGTGTTTGCACATTATGTCCACTTTCAATCTAGCATTTCAAGTTCAAGTTTAGACATACGAGCACGCAAAGCAAAATGAAGTGGAAAGCTATGATTTTAATGGGGATTTAGTCTCTTTTGTTCTTTGACCTTTTGTGGCTCTCAGAATACATCA ..x.:...::.:..::.:xx....:.-...x..xxx:::..:....::x.:.--..:.xxx...:x:x:.x.x..::x..x:....x.:..x.x.x:.:xx...x....x...xx..:xx............:.-.x.....x.:....x:.::.-:..:..x........---....:x:....:x:...........:.:......xxx.....:x.......x..-...x.::.x..-......:..:....x...x......-----.:....:x...x:.....xx.:...--....:..............x...:.........x....x...:x:...:........x...x....xx::...:...x.x:.:.x.. 26M1D25M2I80M1I20M1D15M3I54M1I11M1I25M5I25M2I87M 251/368 68.2% 383/94230402 0.0% 17/368 4.6% 135276399 54938156 +14041 chr4 + 190214555 158127407 158127406 158127631 225 TCATTCATTCATAGGTAATACTTTGACCCCGTGTGCATTGATATAGGTGATAAGAATTTTGGCTCTGTGTTCTATTACATCGATAAGCTTTTCAATTCCTTGTCTACCTCCTTGACTTTCCCAATACACTTTATCAAGAAACAGAGACTGAAGAAGTTTCTGCCGTAAGTGCTGGCTCTTCAAAACAGAAACTGCAGAAGCTGGAAACCTGAAAAGATAAAATGA chr4 + 94230402 22843430 22843429 22843654 22843430 22843429 22843654 225 TCATTCATTCATGGGCAGTATTTTGGCTCCGTGTGCATTTATGTAAGTAAGAAGAATTTTGGACCTCCTTTCTATTACATCAATAAGCTTTTCAATTCCTTTTCTGCCTCCTTGGCTCTCCCAGTATACTTTGTCAAGGAACAAAGACTGAAGTAACTTCTCCCGTAAACGCTGGCTCCTCAGCACTGAAACTGCAGACTCAGGGAATCTGGAAAAGCACAAAGA ............:..:.:..:....:.:...........x..:..:..:.x...........x:..x:x............:...................x...:........:..:.....:..:.....:.....:....:.........x.::....x......::........:...:x..x...........xx.x..:..:...:...:::.x..x.. 225M 178/225 79.1% 225/94230402 0.0% 0/225 0.0% 135283977 54930578 +13764 chr4 + 190214555 158130768 158130767 158131160 393 TGTTACTATAAAACTTACTCTTTGATGCCTTCTAACAATTTGAAGTTTAAGTTATCTTCACTCCTGTCAAAGAAACCCTTGTTGTCTATAAAAACCAAATGCCTTGGGTCATGCTTTCGCTGGATAATGTGTGCTAGAGCCGCAGAACCTTGGTCATCACATTTTGGCCTCAATCCATTCTGTACACAGGCATCTTCCTTGCGAGGTCTGAATCCACAGCAATTTGTATCTAAGCGATTATAAATCTGTAAATGGAAAACACAAAATCCAAGATGCTGAGTGAAAACAAAAC-------TTGGGAAAGTTACAAGATTTTCAAAGATCAGTGCTTTCT-GAATAGCTGACTTGCCAGAATCTAAGAGGGCCAGGCTCATT-TAATTAAAGGCAACTGTCAGA chr4 + 94230402 22843931 22843930 22844315 22843931 22843930 22844315 385 TATTAACATAAAGCTTACTCATTGATTCCTTGTAGAATTTTGAAGTTGAGATTGTCCTCACTTCTGTCAAAGAAACCTTTATTGTCTATAAAGGTCAAGTGCCTTTGATCATGTGTTCTCTGCACTATGTGCGTCAAGTCAACAGCATCCTGATCACTGCATCTCAGAACCAGTCCTTGCTGCACACAGGAATCCTCCTTCAGAGGTCTGAATCCACAGCAGTGTCTGTCTAGCCGGTTATAGATCTAAAACC---AAGCACAG----CAGAGCGCTGAGTGAGAACAGCATCAAAGTATTTGGGGCATGGTGCCACTGTCAAA---CATTGCTCACTAGCACAGCTGGCTAG--AGAAT-----AAGCCCAGAAGAATTGTAATTAAAGGCAGCAGTGAAA .:...x:.....:.......x.....x....x..:x.x.........x.::..:..:.....:..............:..:...........:::...:......x.:.....:x...x...x.:x.....:.::.::x.x:...x.:.:..:...:::...:.::.xx:..:...x.x...:.......x...:.....xx...................:.x.x.:....:x..:.....:....:x..x:---..:....:----..::::.........:....:x.:-------..x..::x:.x:::xx.:.x.....---..x....:x..-.x.:.....:..x.--.....-----.:.x....:xxx...-............:.x..x.:. 253M3D8M4D24M7I25M3D11M1I14M2D5M5D15M1I21M 265/376 70.5% 385/94230402 0.0% 26/376 6.9% 135286837 54927718 +3565 chr4 + 190214555 158136256 158136255 158136368 113 GTGCACCTACGGTCCCAGCTACTCAAGAGGCTGAGACAGGAGAATTGCTTGAGCCCAGGAGTTCAAATCGAGCCTGGGCAACATAGCAGGACCCCCAGAAAATGCACTGTGCC chr4 + 94230402 76033204 76033203 76033303 76033204 76033203 76033303 100 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT----------TTGGGCTGTAGAACATGATGCCAAGCAGATG---TGTGCC ......x.:::..:.........::.:........x.xx.x...x::.....:.....:..:.----------:.....x::.x.:..x..:x..x..x.:...---...... 63M10D31M3D6M 70/100 70.0% 100/94230402 0.0% 13/100 13.0% 82103052 NA +11971 chr4 + 190214555 158155608 158155607 158156228 621 TACCTGTAACAAAAAATCAAAGAGTGCCATCTTGGACCACTCATGATGATGTATTTCAGTACAACCCGATTCAGGCTTGGGTACTCGGCCATTCTGCCAGCATTTCTGTTTCAGCAACTGCTGATAAGTTCCCCAGGTGAGCTTAACAGAAGAATGGGTGTCATTACTTGCTGAAGATAAAGATGCATCCCAAAGAATGATGGGGCATGGGCGGCCATCTATAGAATCAGAAAAACAAACACACTTTCAGCACACTATTGACTCAGGGTGTGTCTTTGAGCAGGTCGTTCACTCTTTCACAGTCTCACGCTCACCTATC-------------AAATGTGAGAGTTTAATCTGACAATATTTTATGATC--TCTTTGTCTTCTGGTTTTAATACTTTCATACCTCAATGCTTC-------CTGTTTGA--AGTCTCATAAAGCAGAAAGT-------------TATTG-------------------TTAGACAATGAAAAAAAATT--------TAAACGAGATATTTTATAGATGTGGCAGG--AATAGGCTACT--AAGCACCAATAA----CAACGTCCTATGG-TTAATGTGGTTTTATTCCACATCTAAAAGCAGCCACCACAAAAAGGGAAAGAATCTAGACATTTATAATTGTCTATTCAATGTCTGAGTGGAGCTGCTCTTTATTT chr4 + 94230402 22848079 22848078 22848728 22848079 22848078 22848728 650 TACCTGCAGAAGAAAATCAAAGACTGCCATCTTGGACCACTCATGATGATGGATTTCAGTACAGCCCCACTCATCTTTGGGAACTTTACCATTCTGCCAGCATTTCTGCTTCAGTAGTTGTTGATATTTTCCCCAGGTTAATCTCACTGAAGAATGAGTATTGTTATCAGTTGGACTCAGTGAAGAATCCCAGAGAATAACAGGACACGCTTGACCAGCT-----------NNNNNNNNNNCTTTTCCA----------AAGTGAAGGTGTG----TGTGTTGGATATATATTTTTTCCCCCCCAGAGGTTTATATATCTCCACCCTGAGAGAGAAATGAGAGTT----------ATTGTTTAT-ATCAGTGTGTGACCTCCAGTGGAGAGAATCTCCCAGGAGAATAAACCAGGAACACGGCTTGACCAGCTGAAAAAAGGGAGAAATAAGATTATAATTATACTGGGATACTGTCAGACTGACTTTAGGCATTGCCTAAGCATTCCTGTGTGTAAAAACAGTGTTTTACAGATGGTGCCAGAAAATATGTTGCCCACAGAACTAATAAACTTCACAATCCTTTGGTTTTATGTGATCTTATTCCACATCTAAAACCAGCCACCAAAAGAATGGAAGAAGCTCAGAC----ATAAATGCC--TTCAGTATACAG--AAAGCTGTTTTTTTTTT ......:.:x.:...........x...........................x...........:...x.:...xx:.....x...:x:....................:.....:.::..:.....xx..........x.:::.x..x........:..:.::...::x.:..:.xx:.:x..x.x......:.....:.::..:..:.xx:.:...x..-----------XXXXXXXXXX.x:..:..----------:.x.x.:......----..x.:x..x::.x:.:.:....x.xx:.xx.x.:.:.:x....-------------.:.x:........----------..xx.....-...--.x.x..x.:..::..xxx:.x.x.:..x:.xxxx...:xx:.-------.x.:....--..::xx.x....x:::..:.-------------..:..-------------------....:..x..xxx..:x...--------....x:x::.:.....:.....xx..x:.--....x.:.:.:--x..x..:.....----..xx:....x...-..x.....:.:.................x.........x..:..x....::.::::....----....x..:.--....:.:.x:::--::.....:.:...x... 220M11D18M10D13M4D43M13I13M10D9M1D3M2I42M7I8M2I20M13I5M19I20M8I29M2I11M2I12M4I13M1I60M4D9M2D12M2D17M 387/567 68.3% 650/94230402 0.0% 117/577 20.3% 135307529 54907026 +30290 chr4 + 190214555 158170447 158170446 158172699 2253 AAGCATGTGAATCTGTTACCTTGGATGAACTCTGCTTTCCTGCTCACAGACGGCAGGGTCCTGTTGAGCCCCAGGATCCTGTCTAGGTGGAAGGCAAACACCTCACTCATGTCCAAGGGCTGCTTGAGAAGCCCACAGGGGCTAGGGCCACAGCGGAGCACAGCGCC--AGGTGC----GCCCCCCTCCAGCACCAGCAAACGGGCTCCGCTCCTAGAGGACACAGGCCGGAGCCCTGCCACTGCGCTGTCCGCCAAGAGTCGCATTCTTCGGATGTCATCTTTGCTCAGCCAGGAGGGGGCGCTCTCGCTGTAGATCCTAATGTTGCTCTCC-----CTGGAGCTGGG--------CTGCAGGAAGTCTGGGCCCCCGGCTCGCACTCCCGGACCC-CGCACCAACCTCCAGGGTCGCTCTCCAATCT------TAACCAG---------GTTTGCTCCCTGAGC-------GTACCCA--GGTGCTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGGCTGAAGGGA-----TGGTCCGACCAA-------AGCCTC---------CTGCCC-TGGGGCAGCCGATGCCACTGCATGCTTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATTGGCCGGCTTGCTGCGCTTGGAGCGTAGGGTAATGTACACCACATTGGGCTGCAGAGTGGACCCATTGCC-------CTGGGACTCTGGAGG--------GGCCAGGGTACCATCCAGGGGTAT-CTCAGGGAAG--GATGGCTCGGCGGTGTCGCGGCTGC--GATGTGGCCCCTTCTCAGCCGCCTGTCCATGCTGGAGAGAGGCCCTCCCCACCTGGCTCACCAGGAAGCCCAAGTAGATGGCACACGCAGTGCCCAGCAGAAGGTTTCTCCGGGTCCTTGGACGCCGGCTGCTCCAGAGCTTACGCACCCGCGGGACGCACAGGGAGCAGATGAACCAGTTTATGAGCTGCCCCGGCTTGTCTGGACAGGTCATTTCTCTGCCGCATCCACATGTTGAACGGAGTTTAAAGTCTGCAGTTGGCTCCTGCTA--ATG-TGATGCATGGTTTCCTGACTTCAGCTGCCGCGTCCGCTTCGGGATATAAGTGGTCTCCAGTGGGCAGAGGTGGAAGGAAAGGGTTGGTGATGAAGCTGGGAATGTTTCTGACACAA-----------------------CAAACCTTTTAA--ATTATCAGTCTCCCCAAGGAGAAATGCGGCTTGTTTCTGGGAATGAATGGATACAG------------AGTTAACTGAGTCACAATTTCAAACCATTTAAGT--TCCTCTACAAGAGTCAAGAAAAAA---------AGTAA----TCATTTCCTTTCATAAATATCACCA-------CTAAATGTTTTTAAAAATAAAATTTAAAAGCATGCAAACGAGATAGATGTATAGATTTGATAG----------TCACTTGAAAGT---AGTGAAAACAAGCCACAAAAATCCAAGAGTGTTTTATAACTTGTACCTAGAGTCATTTAAGTTGACT---CTGAAGCAAAAGCGTTAAAATGTGACAAACCTGGGC--TTTTCCTTTTTGAAATTCAGAAAGAAC-----------------TTAAGACAA----GTAATAGATAATTTTTTAATACTCTATACCTATACCATTTTTATTTTTTAAAGTCCTGAATTAACTAAGTACAAG--CAGCAAGTATTAACAATAAAATTTAGAAACATATTCTCTTAGTCTAAAGGTACAAATTGTACTTCATATTAATAATATGTTCCATT----AGCTTACATTGTTAGTATAATAC--------AAAGCCATAAATGTCCATATATCTTGGAAGCAGTTGCATTTATTCTGTTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCACACACATACACACACACAACACAACACAACTCTGACTGCTTTTTATTTCTTTTCTTTCCACCGAAGTCAGCTGAAAGAAAATAAAAGCATCTCTAGTTCTGTTTTTTCACTATTAAAAAGAAAAAGAAGAAACTCGTAAGCAACCTTACTTACACAGCTGGCCCCATGCTTGGCTCCAGGAAGAATGTAATCCTTGACTCTAATGCAAAGAACTTTTAAAGGCTGAGGCATGTAAG------TAGAACATATTTCATGGTCAAGAGTGTTCCACATTTCAAACATTTCAGTTCAGCTTTAAAAGCTCCCTTGAAAACTA--------------CTGATTGCAAAGCAAAACTTGGAAAC-----TGACTGCTGCATGGTTTTAAGAGATACAAAGCTTTTAAAAACAATAGTTAACAAAATAAA----CTTTAATTTTAAATTCGGAAAAAAGAAATGCCGTAGAGAATCAGTTTTCATTCAAATAAATTTCCACTTATTTTTAACCCCTGGGAGCCCTCTAGTGTCCTGTTCGCAAACAGAC chr4 + 94230402 22856127 22856126 22858418 22856127 22856126 22858418 2292 AATCATAGAAATGCATTACCTTGGAAGAACTCCGATTTCCTGCTTACAGAAGGTAAGCTCCTGTTTAGCCCCAAGATCCTATCCAAATGAAAGGCAAACACTTCACTCATGTCAAGGGGTCTTTTGATGATGCCACAGTGCCCCTGAGTACAG------GCAGTTCCTGTGGTGCTGGGACCCTTCTCAAATACTACCA---GGACAGCTTTTTGAGAAGGTAGTTTTTGGATGCTCTCTATCCGAGAATCTGCCAACATACGCATGCTTAGAATGTCTTCTTTGCTCAGCCACGAGGGAGAGCTCTCGCTGTAAATCCTGATGTTACTTTCCTCAGGCTGAGGCTGTGCCTTAATCCTTCCAGAAATC----CCCCCAGGTCT--CTGGTGTACCCTCTCCCTGACTGCCA-----TTTCTTTATGCTGGAGTATATCCAGTTGGTGTTTTTTTGCCTCCGGAGCTGTTGCTGCTCCCATTGCACCCATAGCGTGAATGTCCCT------CCCCAGCTGCTGAAAAAAGATCTCTTTCTGGCCAGTGAAAGTGGCTTTTGGAAAGTGCTGCCCATAGGACA----ATGGGACTGCATGTTTCTTCCTGTGCTTTGGCTTCACCGTGCCTCTGATATTGGCAGGCTTGCTGCGCTTGGACCGTAGGGTAATATAAACCACATTAGGTGGCACCAAGGTTCCATTGCCACCCAGACTGGGTTCCTGGAAGCTGGGTGCTGACAGGGTACTGTCCAGTGGGATGCCCAGAAAAGCAGTTTGCATTGCATCCTGGAGACTTCTGGAACTGATAGTTTCGTATCCTCCTTT--ATGCTGGGGTAAAACGTGGCCCACTTGGCTGACGAGGAATCCCAGGTAGATCACACATGCAGTGCCCAGCAGCAGATTCCTCCTTGTCCTCAGGCGCCTGCAAGTCCACAGCCTCAGCATCCATGGGGAGCACAGGCAACAAATAAGCAAGTTTTTTATTTTACCTGGCTGATCAAAGAAGGTCATTTCTCTAGTGAATCTGCATGATGAAAACAGCATTCAGTCTTCTGTACACTCCAGCCAGGATGATGATGCATGATTTCCCTTCTCTGTTTTATATTTCTCCTTT----TCCAAAAAGCTTCC----TGCATGGGTGATGGACAGCGGCTATGGATATGCCTGGGAATGTGTTTAGTACTAAGGATGCTGTCACTCCACCTCTGCAAGCCTTTGAATTCTTATCAGCCACCACAGGGCAA---GTGATTGGTTTCAGAGAATGAATGGAGCCAGCTACGTAAGCAAAGTTTACTCACTTGTAGACTAAAATATCTGAAGTTCTCCCTTGCAAACTGCAAAAAGAAAATGGTTAATAGTAGCATTTCATTTCATTACACACAT-TCAGCATCTGTGGCTCTATATTTAAAGAGACAGAAGTTCTAAATG---AGACAATGTGCATTTAGAAATGTTCCAGAATACATCTTTCACTTTCTAATTACAGTGTAAGTTAAACACCAAAATCATGAAAT--------ACAGGCTCAAATTGTAATCTCAGCTAGCTGTCTTCCAGCATTAGAAGAAAAGCTTATCAAATCCAAATCATTATCTTTTTCTTATATAAGACAGAGTCTTTACTAAAGCTCATGTTATGAAAATGCTGTAAATTACACATTATTAACAACCAATAACTGTAGC----------------------AGTTAAATATGCACATATTCAGTAA-TACAAAAATAAAGGAGCAGTAACAAATTTTCCTAGTTTAATGT----AAATACAGTTCACATAACTCAAAACCTACATTAAAAAGGAAAGATAGTTAATTCTTTACACTCTTGTAAAGCCATAAA-----ATAGGACCTAGCAATAGTT----------------------------------------TTTCAAATAAAATCAC-----------------------AGTGCCTTATATATCCTTTC---------AAACAAACACAGATAGAATAAGTGCATA-------CTGTATACTTATTGCTA-----TAAAAGTATAAAACC--------TCTTACCTATTCAGCTTGACTCATCTTTTGTTCTGGTA-------AATTCCTTAGGTTAATAAAAATAACTTAGTAAAACTGACGTTCTAAAAGAATTCTAGCCCATATTTCAGTTTTAAGTATAGTACACATTT-ATGTACTTCATTACAAGCT--AAATACTGTTTGGAACCTAACCGTACGGAGAGGCTGTTTGCATATGAACTGCTATAAACTTACATGAACCTCACGTTATGaaaaaaaaaaaaaaacaaccaaaaaaaaaaaaaaaaaaaaCCAACCCTCTTCTATTTTAAATTCTGTAATGAAAAGTTCGGTGAAGTAAGTGCCTTC--CAAAAGTACATTCCATCCATTTCTAACTCCTGAGGGCCCTCTAGTGCACTGCACACAAATGAAC ..x...:x:...x::..........x......:.x.........:.....x..:.:.x.......x.......:......:..:.::..:...........:...........x.:...::x:....x:.xx......x.x.:xx.:x:....------:...:x..--x.....----:...::...x.::..:.x..---..:.xx.x:.::x...:.::.xxxx::...xx.::x.:.::xx:xx:..:.....x.xx.....x...x.:.....x..............x.....:.x............:.....:.....:..:...-----...::....x.--------..x.x:...:..----.....:.x..x--..xx:.x....-.x.x.::..:x...-----x:...::.xx..------..x....---------x.....::..x....-------.:x....--.xxx.:.:...:.x.::x.....------::..x..x......:::.-----:xx..:.:...:-------:..:.:---------......-.:..:..----...xx........:..:......:....x........x.....x.x.........x.................x...........:..x........:..:x...xx:x..x:........-------.....x::.....:.--------x.x........::.....x..x..-.:...::...--.x.x..x:x..:x:x.x.x.:..x.--..xx..::xx:...x:.x..x...x.--.......:.x:.::.x:xx.....:.....x..x.....x....:......x:....:..............x..:..:....xx.....::.:....x..x:x....x...:.xx...:..::...:x.......x.:..:..:.:.x.....x.x.x:.xx..:....x:..x:::x.............:x:.x...::....x....x:x..:x.xx.....x.x..xx:....x..:.--...-.........:.....:xx..:::x:.xx:::x..:x...:----.x:..:x:.::...----x...x:....:x:.:x.:x..:.:xx...:x:x..........x.:.:::..x.-----------------------...:.....x..--x.......:.x..x..:..x:.---.:.::.x.....x.:...........xx...------------....x...x.x.:::.:x:.x...:xx:.x....--...::.:...:xxx...:..:...---------....:----.......x..x..:.x..-...x..-------..xx..:...xx.:.:.:.:..x..xx..:::---.:..:.x:.:x..x..x.:..x.xx:..----------......xxx.:.---....x..::x.:x...x......xx::.:.--------..xx.:x.xx.xx..x..:.x..:.::..---:.xx....xx..x:xx...::x.:x....:.:::::--..x..:....:xx.xx.x...x...::-----------------...x..x..----....xxx.:.xx..x....:.x:.x...x..:..x.----------------------.:....x..x.:...x:--...:..-..:x..x.xx..::xx:..x....x...:..:....:...x.x----..x.::.x....:..x.x.x.x.xx:.x....----..xxx.x..x....:.x:xx...--------...........-----...x:x.:.:.x.::....----------------------------------------.:...x.:.x.xx...-----------------------.x...:..x...x..:....---------..::x.:.xx.:.x.:.....:x....x-------....x.x:.:.:.::..-----x.....x.x...x:.--------:.....:..:x.....x.x.:...x:..x.:..::.x.-------...:.:.x.xx:....:x...x.....xxx..::....x.:x:xx..:------...xx.........xxx.:...x:.:x.x.......-.x::.:....x.x..:x:.--...xx::x:...:..x...--------------...x.....x.xx..xxx:.:x....-----...x:x:::.:.x:.xxx..:.:.x.x...:.xx::.....x..x.:xx..x....:x..----...:x...........x.x..x:.:..:.x.x..::..x.xxx.::...--:x...xx.xx.....:::....:....:....:.:...........:x...:x.:....:::.. 153M6D8M2I6M4I20M3D131M5I11M8I12M4D11M2D11M1I14M5D12M6I7M9I15M7I7M2I23M6D18M5I12M7I6M9I6M1I7M4D121M7I15M8I24M1I10M2I25M2I26M2D243M2I3M1I40M4D14M4D54M23I12M2I22M3D31M12I34M2I24M9I5M4I18M1D6M7I32M3D28M10I12M3I30M8D29M3I36M2I27M17I9M4I36M22D17M2I6M1D43M4D32M4I23M8I11M5D19M40D16M23D20M9D28M7D17M5D15M8D38M7D48M6I36M1D19M2D19M14I26M5I60M4I49M2D64M 1331/2062 64.5% 2292/94230402 0.0% 421/2062 20.4% 135314320 54900235 +3091 chr4 + 190214555 158172160 158172159 158172199 40 CTCTCTCTCTCTTTCTCTCTCTCTCACACACATACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::........:..........x........:....... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 82924111 NA +3305 chr4 + 190214555 158172162 158172161 158172201 40 CTCTCTCTCTTTCTCTCTCTCTCACACACATACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::......:...................:......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 82924113 NA +3054 chr4 + 190214555 158172166 158172165 158172201 36 CTCTCTTTCTCTCTCTCTCACACACATACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ......:..................::......... 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 145570862 44643693 +3073 chr4 + 190214555 158172168 158172167 158172225 58 CTCTTTCTCTCTCTCTCACACACATACACACACACAACACAACACAACTCTGACTGCT chr4 + 94230402 12601304 12601303 12601361 12601304 12601303 12601361 58 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAGTGCTATTGCTCTGTCCACT ....:............x......::...........x:::x:.:x:.....x.::.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 145570864 44643691 +3004 chr4 + 190214555 158188944 158188943 158189032 89 CACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGTGATTGCAGTGAACCAAAATCATGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...x......:.........::::........x.xx.x...x::........::.:..x:xxx.::..:..------..x..x...... 71M6D12M 57/83 68.7% 83/94230402 0.0% 6/83 7.2% 82155737 NA +3375 chr4 + 190214555 158193202 158193201 158193271 70 TATATGTGATCCAAAACAATTCTTCTTCTTCCACTGTGGTCCAGAGAAGCCCAAAGATTGGAAGCCCCTG chr4 + 94230402 43915637 43915636 43915706 43915637 43915636 43915706 70 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATG ........:.....:.:....::.:...x::x.x....x:.....x...x.x....x.....x....x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 114277565 75936990 +3044 chr4 + 190214555 158202986 158202985 158203052 67 AAAATCAACAAAGGTAATATTTTTATTATTTATTGGGATATTCTTTTTTTTCTTTTTTTTTTCTTTT chr4 + 94230402 34648156 34648155 34648222 34648156 34648155 34648222 67 AAAATCAACTAAAATTATATTTTCACTTTATATGTTGATCTTTTTAATTTTTCTTTTTTTTTTTTTT .........x..::.x.......:.:.x.x...xxx...x..:..xx....::.........:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 123554830 66659725 +6204 chr4 + 190214555 158212673 158212672 158212816 144 CAACAATGGAGCAGACCTAACCTTTGGTTACATCTCCTGTTTTGTAGCTATCCTTTTGTTTGGCTCAAATTTTGTGCCACTTAAAAAATTTGATACTGGTGATGGTAATTATTTTTCCTTGATTGTTAACGTTATATTATTTTT chr4 + 94230402 22864956 22864955 22865094 22864956 22864955 22865094 139 CAGCAGTGGCACAGATCTAGCTATTGGATTTACCTCTTCCACAGTAGCTGTTCTTCTATTTGGGACAAATTTTGTGCCAGTTAAAAAATATGATACTGGTGATGGTAAACTTATTTAC---ATTTTTAC--TTTTATTATTTTT ..:..:...x:....:...:.:x....x.x:.:...:.x:x:x......:.:...:.:.....xx..............x.........x..................x:x.x...x.---...x...x--..x.......... 118M3D8M2D13M 105/139 75.5% 139/94230402 0.0% 5/139 3.6% 135347717 54866838 +7290 chr4 + 190214555 158215175 158215174 158215317 143 GTTTGTTTATTTC-TAGGAATGTTTCTCCAGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCTTGGTTGTCAATCTGATATTACATTGTCCAAAGTTTTGGCCTTTTGCAATGCTTGGGGGCTGCATTTGGGCAACAGGTAA chr4 + 94230402 22866096 22866095 22866239 22866096 22866095 22866239 144 GTTTGCTTTTTCCATAGGAATGTTCTTCCAATGGATTCTCTGTGCTTCCATATGGATAATTTCTTTGGTGGTCAATTTAATCCAGAATTGTCCCCAGTTTTGGCCTTTGGCTATGGTAGGAGGTTTCCTGTGGGCTACAGGTAA .....:..x..:.-..........::....:...:....:......x........x.::..x.:.....x......:.:..x:x:x.......xx.............x..x...x.x..:..:.x.x.x.....x........ 13M1I130M 109/143 76.2% 144/94230402 0.0% 1/143 0.7% 135349079 54865476 +5908 chr4 + 190214555 158217296 158217295 158217436 141 TTTCTTCTGTATATTACATCTACAGGGAACATTGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGGCCTTGGAATCTTAATCTGGGGATCATTTAATGCCTTAACTGGCTGGGCAAGCTCAAGGTAA----TTCAAGTCAAAC chr4 + 94230402 22866676 22866675 22866820 22866676 22866675 22866820 145 tttctttttcttttttctttttCAGGCAACATCACAGTTGTCCCTATTATTAAAACCATAGGCTTAGCTCTTGGTCTTTTGATATGGGCTTCTTTTAATTTGCTGACAGGCTGGGCAAGTTCCAGGTGAGCATTTTAAATCATAC ......:.x:x.x..x.x.:.x....x.....::.x........x.....:........x..:....x:.....xx.:..:..x....xx..x......x:x:.:..x...........:..x....:.----..:..:...x.. 129M4I12M 102/141 72.3% 145/94230402 0.0% 4/141 2.8% 135350620 54863935 +3136 chr4 + 190214555 158218984 158218983 158219055 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGGTTGAATTCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx:x.....::...:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 82185778 NA +5265 chr4 + 190214555 158219304 158219303 158219415 112 TTTCAGGTTTGGCTGGTTTGGATTGGATGCAGAAGAAGTATCAAATCCGCTGCTAAATTACATTGGAGCTGGGCTATCAGTAGTAAGGTACACAGTCATTTCTAGTGATTTT chr4 + 94230402 22867306 22867305 22867414 22867306 22867305 22867414 109 TTCCAGATTTGGGTGGTTTGGAATTGACCCAGAAGAGGTAGCAAGACCAGCCTTAAATTATATTGGAGCTGGACTTTCACTATTAAGGTAAAAAGTTAT---CATTGATTTT ..:...:.....x.........x.x..:x.......:...x...:x..:x:x:.......:...........:..x...x..x.......x.x...:..---:.x....... 99M3D10M 83/109 76.1% 109/94230402 0.0% 3/109 2.8% 135351998 54862557 +3115 chr4 + 190214555 158226886 158226885 158226935 50 TTTTTCTTTTCTTTTTCTTTTGAAGATGATAACTATTCTTTCTAAAGCGA chr4 + 94230402 74370078 74370077 74370127 74370078 74370077 74370127 50 TTTTTTTTTTTTTTTTCTTTTGGAAATGATAAATACTCATCCTAAACTGA .....:....:...........:.:.......x..:..x.:.....x:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 83856808 NA +3574 chr4 + 190214555 158232876 158232875 158232989 114 TCACTAAAATTTATTTTCCTTAC-AGTGCTTTCATATTTTTGTTCATCAAAAGTGAAATACCAAATAACACGTGTTCCATGGATACCACTCCATTAATAACAGAGCATGTGAGTA chr4 + 94230402 22868977 22868976 22869091 22868977 22868976 22869091 115 TCACTGATATGTTTTTCTCTTCTGAGTGCTGTCATATTTTTTTTTATAAAAACTGAAGTCCAAACTTCTTCAGCTTCGTTAGAAAGCACACCATTACTGAGAGAATGTGTAAGTA .....:.x..x.x...::...x:-......x..........x..:..x....x....:.x.x..x.xx:x.:xx...xx.:..x.x...x......x.:.x...:::...:.... 23M1I91M 77/114 67.5% 115/94230402 0.0% 1/114 0.9% 135363899 54850656 +3424 chr4 + 190214555 158234401 158234400 158234482 82 GTGGTGGCACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x....:.:...........::........x.xx.x...x..........::.:..xxxx:..:..:.. 6M5D71M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% 82201200 NA +6998 chr4 + 190214555 158237505 158237504 158237671 167 TGATTTAT-TTGTTTTGTAAGGGGCTGCAGTCTTGCAGTGATATCTGGAGTACTCTATGGATCTACATTTGTGCCAATCATCTACATCAAGGACCACAGCAAAAGAAATGATAGTATATATGCAGGGGCAAGCCAATATGGTGAGAAT--AAAAAGTTATCTTACTTTAT chr4 + 94230402 22870662 22870661 22870831 22870662 22870661 22870831 170 TGATTTTTGCTCTTTTTAAAGGGGATGTAGCCTAGCTGTAGTAGCTGGAATACTCTACGGTACCAGTTTTGTACCAGTACTTTACATCAAGGACCATGGAAGAAGAAATGAAACTATATATGCAAGAGCGAGTCAATTTGGTAAAGGCTGATAAGACCGTTCTACTTTAT ......x.-:.x....xx......x..:..:..x..x..::..x.....:.......:..xx.:.xx.....:...:.xx.:..............::.x.:.........x.x..........:.:..:..:....x....:.::::--.x..:::::.::........ 8M1I139M2I20M 118/167 70.7% 170/94230402 0.0% 3/167 1.8% 135366843 54847712 +8264 chr4 + 190214555 158240279 158240278 158240428 150 TTTTTAATGTCTATTTTCAGATTTAGACTATGTGTTTGCGCACTTCAGTGGCATCTTTCTTACAAGTACTGTCTACTTTCTGGCCTACTGCATAGCCATGAAAAATAGTCCTAAACTATATCCTGAAGCAGTCCTACCAGGTAAGAATAT chr4 + 94230402 22872126 22872125 22872274 22872126 22872125 22872274 149 TTTGCAATTTCT-CTTTCAGATTTAGATTATGTTTTTGCACACTTCAGTGGAATATTTCTTACAAGTACTATCTACTTTTTGATCTACTGTGCAGTCAGGAAAAATAAACCTGATGTTTATCCCCAAGCCATACTACCAGGTATGACTGT ...x:...x...-:.............:.....x.....:...........x..x...............:........:..::......:::..:..x........:x...:.xx.x.....:x....x:.x..........x..x.:. 12M1D137M 117/149 78.5% 149/94230402 0.0% 1/149 0.7% 135368153 54846402 +6871 chr4 + 190214555 158241478 158241477 158241613 136 TCTGCAAATGTGTGTTGTCT----TTGTATTTC-AGGATTCCTGTCAGGAGTACTTTGGGCTATAGCTACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGTGGTCAGTTTTCCAATAATCACTGCTGTAAGTA chr4 + 94230402 22872691 22872690 22872831 22872691 22872690 22872831 141 TCTGTACATGTTTTTGATCTGAATTTATTTTTCTAGGGTTTGTTTCTGGTATGCTTTGGGCAATAGCCAATTGCTGCTGGTTCATCGCCAATCACTATCTCAGTGCTGTAGTCAGCTTTCCAATAATTACTGCAGTAAGTA ....:.x....x.x.x:...----..:.x....-...:..:x.x..x..x:.:........x.....:.x:.....:........x..x.......x...x........:.....:...........:.....x....... 20M4I9M1I107M 107/136 78.7% 141/94230402 0.0% 5/136 3.7% 135368787 54845768 +3711 chr4 + 190214555 158252672 158252671 158252750 79 GTGATGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACCTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--....:.:...........::........x.xx.x...x...:.........:..x:xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 82219471 NA +4847 chr4 + 190214555 158253426 158253425 158253549 124 TTCTTTTTTCT-----------TATTCAGGGTCTACAAAACTACCTATTAATGATACTTGCATTTTGCATCATCTTGACTGGAGCCTTATGCACTGCTTTTTCTAAAATCTAACAATGA---CAAAACCAGCAGGTGG chr4 + 94230402 22875573 22875572 22875710 22875573 22875572 22875710 138 TTCTTTTTTCTCTCCTTTCATCTATCCAGGGCCTGAAAAACTACATATTACTCTCAGTAGCCTTTTGCATCATTTTGGCTGGATCGCTCTCCACAGCTTTTTCTAAAGTTTGAAGAAGATCTTCTTACCAGTAGATGG ...........-----------...:.....:..:x........x.....x.xx:.x.x..x...........:...:.....x.x:.x.x...x............:.:.:.x:.x..---:xxx.....:..:... 11M11I97M3I16M 92/124 74.2% 138/94230402 0.0% 14/124 11.3% 135377853 54836702 +3363 chr4 + 190214555 158255471 158255470 158255569 99 TATATATACACACATTTATATATGTATATATATACACATTTATATATGTGTGTATATATATACACATTTATATATATGTGTGTGTATATATATATACAC chr4 + 94230402 74437250 74437249 74437337 74437250 74437249 74437337 88 TAAATGCAAACTTATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGT-----------TGTACTTGTATGCATCTAGATATGGAC ..x..::.x..x:.............:......:...:..:..x.:...:.:.:.::..:.-----------.:..:x...:..:..x..x....:x.. 61M11D27M 61/88 69.3% 88/94230402 0.0% 11/88 12.5% 83818221 NA +3096 chr4 + 190214555 158255508 158255507 158255577 70 ATTTATATATGTGTGTATATATATACACATTTATATATATGTGTGTGTATATATATATACACATTTATAT chr4 + 94230402 58041778 58041777 58041847 58041778 58041777 58041847 70 ATTTACGTAAGTCAGTTTACATATACACATCTATTTGTATGTGAGCATGTATGTATATCCAGAAGCATAT .....::..x..xx..x..:..........:...x.:......x.::.:...:.....x..x.xx:.... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 100213730 90000825 +3088 chr4 + 190214555 158255546 158255545 158255612 67 ATGTGTGTGTATATATATATACACATTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx.:....:.:x::x.:...x....:.........:.........::..:::.:.:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 130930055 59284500 +3075 chr4 + 190214555 158255551 158255550 158255616 66 TGTGTATATATATATACACATTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:....:xx.:.......x.xx.:x..x..:...........:.........::..:::.:.:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 130930059 59284496 +3231 chr4 + 190214555 158255569 158255568 158255653 85 CATTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATACACACACACACAGACCTCTATAT chr4 + 94230402 39131746 39131745 39131830 39131746 39131745 39131830 85 CGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGCTCACTATGT .:...:..:::.x......x...x.x.......:x.....::.....x.:x:..:..x...x..:.:.:...xx.x:.x....:. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 119123823 71090732 +3185 chr4 + 190214555 158255571 158255570 158255645 75 TTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATACA--------CACACACACAGAC chr4 + 94230402 85834531 85834530 85834613 85834531 85834530 85834613 83 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC .....x:..x.....x.................:.xx:...:x.::.:::.:.:..x.....--------......:...x.. 62M8I13M 55/75 73.3% 83/94230402 0.0% 8/75 10.7% 72421040 NA +3070 chr4 + 190214555 158255586 158255585 158255654 69 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATACACACACACACAG---------------ACCTCTATATA chr4 + 94230402 79265519 79265518 79265602 79265519 79265518 79265602 84 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATA .............::........xx...:.:.:::.::.::.:.:.....:..x...x---------------........... 58M15I11M 51/69 73.9% 84/94230402 0.0% 15/69 21.7% 78990067 NA +3108 chr4 + 190214555 158255594 158255593 158255645 52 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATACAC----ACACACACAGAC chr4 + 94230402 79265519 79265518 79265574 79265519 79265518 79265574 56 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAAC .............::........xx...:....:......----:.....:..:.. 40M4I12M 43/52 82.7% 56/94230402 0.0% 4/52 7.7% 78990075 NA +3639 chr4 + 190214555 158283896 158283895 158283965 70 CATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x....:.:...........::........x.xx.x...x.:...........:.. 10M2D58M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 82250699 NA +3702 chr4 + 190214555 158288123 158288122 158288212 90 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGTAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGACATCGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.:...........::........x.xxxx...x.............:..x:xx:..:..:..------:....x:..... 72M6D12M 62/84 73.8% 84/94230402 0.0% 6/84 7.1% 82254917 NA +3240 chr4 + 190214555 158298516 158298515 158298557 42 CAAAAAACAACAACAACAACAAAAAAAAAAAAACAAACAGAA chr4 + 94230402 76741977 76741976 76742018 76741977 76741976 76742018 42 CAAAAAATAACAACAACAACAAAAAAAGCCAAACAAACAGAA .......:...................:xx............ 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 81556539 NA +3188 chr4 + 190214555 158335332 158335331 158335398 67 TTTTAGACAACTTTATTGCTTTAGGTTCAATTTTCCCCCCACCACCCCCCCACCTTTTTTTTTTTTT chr4 + 94230402 37517498 37517497 37517560 37517498 37517497 37517560 63 TTTTAAGCACTTTT----TTTTAAATGCAATTTTCCAGCCCCCCCCCCCCCCCCTTTTTTTTTTTTT .....::..x:...----:....::.x.........xx..x..x.......x............... 14M4D49M 50/63 79.4% 63/94230402 0.0% 4/63 6.3% 120817834 69396721 +3216 chr4 + 190214555 158357714 158357713 158357800 87 TTGCTGTTAAACCAATGATATCATAAATTCCAATCCTCAAAAAAAAAAAAAAAAAAGTCCTCAAAAATGTCCTGGCCATACTGCCCA chr4 + 94230402 22275940 22275939 22276024 22275940 22275939 22276024 85 TTTCTGTCAGGCAGGGAATGTTATA--TTTGAAGAGTTAAAAAAAAAAAAAAAAAAGTACTTGGAGACACTCCTGCCATACTGCCCA ..x....:.::.x::x:..:.:...--..:x..xxx.:....................x..:::.:.::::.:x............. 25M2D60M 57/85 67.1% 85/94230402 0.0% 2/85 2.4% 136081774 54132781 +3259 chr4 + 190214555 158385471 158385470 158385553 83 CATGGTTGCGGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAAGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..x.:.x...--....:.:...........::........x.xx.x...x.:........:.::..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 82352274 NA +3008 chr4 + 190214555 158385610 158385609 158385681 72 TATATATATATATATATATACACATGTATATGTATGTATACATATATATATGTGTATATATATATATATACA chr4 + 94230402 76376859 76376858 76376930 76376859 76376858 76376930 72 TGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATA .::...:x.x.x..:....:..x.x:..:.......:.....x.xx..:x........:....:.::...:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 82008751 NA +3399 chr4 + 190214555 158385664 158385663 158385726 63 TATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC .:.:.....::...:.....x..xx..x.:.:.....:...:.:....:.:......:..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 111250487 78964068 +3026 chr4 + 190214555 158385677 158385676 158385783 107 ATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACACACACACACACACACACA chr4 + 94230402 7596572 7596571 7596678 7596572 7596571 7596678 107 ATACATGAGAAATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACA .......x:x.xxx....:x.xx....xx.x...x.....x:.:.x.........::....x.xx..:.:.:...:.x.....x.x..x:x..x::...:.:x.... 107M 68/107 63.6% 107/94230402 0.0% 0/107 0.0% 150789105 39425450 +3510 chr4 + 190214555 158392253 158392252 158392378 126 TATATTTTATATATATATATATATATATACACACACACACACATATATATACATATATATGTGTATATGTATATATGTGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGT chr4 + 94230402 54005680 54005679 54005796 54005680 54005679 54005796 117 TATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT---------TAGCTTTATACATGTGCTAGTTTGTGTGT ......xx.:.:....:...x..........:...........:.x.x..x::.x:xxx..:::.x.x:xx..:..:......x..:.---------.:xx.x....:.....:xx..x....... 88M9D29M 78/117 66.7% 117/94230402 0.0% 9/117 7.7% 104386573 85827982 +3092 chr4 + 190214555 158392270 158392269 158392318 49 TATATATATATACACACACACACACATATATATACATATATATGTGTAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x.................:.:x....xx.......::.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 68568338 NA +3041 chr4 + 190214555 158392271 158392270 158392341 71 ATATATATATACACACACACACACATATATATACATATATATGTGTATATGTATATATGTGTATATGTGTA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.:....x....::..x......::...:.x.x....:.:.:.x.:...:.:...:..:..::::... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 135792073 54422482 +3438 chr4 + 190214555 158392299 158392298 158392390 92 ATATACATATATATGTGTATATGTATATATGTGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....x...x............x..x..::x.xx...::...::.x.:x:x::..:....:.x:x.............:.:.:...x.:x.. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 68579330 NA +3225 chr4 + 190214555 158392307 158392306 158392398 92 ATATATGTGTATATGTATATATGTGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTAT chr4 + 94230402 89812969 89812968 89813060 89812969 89812968 89813060 92 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .....x:.:x......:.....x.:x..::x.xx...:.....::x::x:x:..::..:...x:x...............:.....x.:x.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 68579338 NA +3147 chr4 + 190214555 158392327 158392326 158392392 66 ATGTGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTATGT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ...:....:xx......:.:x..x::x.:x....:.........:.........::...::...:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 131066836 59147719 +3025 chr4 + 190214555 158392330 158392329 158392395 66 TGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTATGTATG chr4 + 94230402 27325492 27325491 27325557 27325492 27325491 27325557 66 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..::....xx.:....:::x..x::x..x..............:.........:::.::..:.... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 131066838 59147717 +3069 chr4 + 190214555 158392338 158392337 158392405 68 TGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTATATATATA chr4 + 94230402 39131750 39131749 39131817 39131750 39131749 39131817 68 TGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ....:::.x......x...x.x.:.....:x.....::.....x.:x...:..x...x:.......:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 119260588 70953967 +3002 chr4 + 190214555 158392359 158392358 158392409 51 ATATGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTATATATATAGAGA chr4 + 94230402 85834538 85834537 85834588 85834538 85834537 85834588 51 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAA ..x.....x...................xx.....x.:...:....:x.:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 72557821 NA +3070 chr4 + 190214555 158416087 158416086 158416131 45 TTACCATTCCAATCTCACTGCTTGTTATTGGTCTGTTGTGTTTTT chr4 + 94230402 38201730 38201729 38201774 38201730 38201729 38201774 45 TTGCCATCTCAGACTCACTGCTTGTTAATGGCCTGTTGTGTCTTT ..:....::..:x..............x...:.........:... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 120214357 70000198 +3043 chr4 + 190214555 158424254 158424253 158424300 47 ATTTTATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 + 94230402 34623070 34623069 34623116 34623070 34623069 34623116 47 ATTTTCTATATATATTGATATATGTATATACACATTTCTTTTTTTCT .....x.........xx......:......:.:....:.......:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 123801184 66413371 +3167 chr4 + 190214555 158424257 158424256 158424311 55 TTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAGAT chr4 + 94230402 24792617 24792616 24792670 24792617 24792616 24792670 54 TTATGTA-AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAAT ....:..-.x...................x:........x.........:x.:.. 7M1D47M 46/54 85.2% 54/94230402 0.0% 1/54 1.9% 133631640 56582915 +3358 chr4 + 190214555 158428326 158428325 158428380 55 AAATAAAACATAATGAGATACACAAAAAAAAAAAGAAAGAAAAAAAAGAAAAAAA chr4 + 94230402 59199854 59199853 59199908 59199854 59199853 59199908 55 AAACAATGCATAAAGAGATACAAAAAAGAAAAGAGAAAAAAAAAGTGGAAAAAAA ...:..x:.....x........x....:....:.....:.....:x:........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 99228472 90986083 +3493 chr4 + 190214555 158441418 158441417 158441491 74 GTGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAGATCACTTGAGCCCAGAATGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x.:....:...........::........x:xx.x::.x.......:.......xx.:x:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 82408214 NA +3038 chr4 + 190214555 158448463 158448462 158448528 66 TATATATGTGTATATGTGTGTATATATGTGTATATGTGTATATATATGTATGTATATATATTTGTA chr4 + 94230402 84187973 84187972 84188038 84187973 84187972 84188038 66 TAAATGTCTGTGTATCTGTGGATGTATGTATTCACGAGTATACATGAGTATGAGTATGTATCTGTA ..x..:.x...:...x....x..:.....:.x:.:.x.....:..:x.....x:...:...:.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 74260490 NA +3815 chr4 + 190214555 158491755 158491754 158491844 90 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTAAACTCAGAAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x....:.:...........::........x.xx.x...x.....:...:......x.xx:..:..:..------..x..x...... 72M6D12M 63/84 75.0% 84/94230402 0.0% 6/84 7.1% 82458549 NA +3920 chr4 + 190214555 158492055 158492054 158492156 102 ACTTTATTTCTTTTTTTCT-----TTCTTTCTTTCTTTCTTTGTCTTTCTCTCTCTCTCTCTCTCT----------CTCTCTCTCTCTCTCTCTCTCTCCTTTCTTCTTTCTTCTTT chr4 + 94230402 63697116 63697115 63697232 63697116 63697115 63697232 117 ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTT ........:..:.::..::-----..:.:.....:....:.::.::....x.:..xx...:.x...----------..:.:..x.xx...:......:...:.:..........:.. 19M5I42M10I41M 72/102 70.6% 117/94230402 0.0% 15/102 14.7% 94794939 NA +3457 chr4 + 190214555 158508598 158508597 158508680 83 CATGGTGATGAACTCCTATAATCCCAGCTATTTGGAAGGCTGAGGCACAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:..x..x--.:..:.:.......:...:.........x.x::x...x.............:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 82475401 NA +3096 chr4 + 190214555 158562384 158562383 158562453 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 82529187 NA +7651 chr4 + 190214555 158572727 158572726 158572841 115 TGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTCAGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGTGGTGAGT chr4 + 94230402 22970158 22970157 22970272 22970158 22970157 22970272 115 TGCCCCTTGGGCTACTTTCCCTGTGGCAATATCACAAAGTGCTTGCCCCAACAACTTCACTGTAATGGTGAGGATGACTGTGGGAATCATGCTGATGAAGACAACTGTGGTATGT ...:..:.x.....:..:........x..:.................:..:.xx..x........:....x...:.....:........x..:.....:............:x.. 115M 94/115 81.7% 115/94230402 0.0% 0/115 0.0% 135602569 54611986 +3183 chr4 + 190214555 158592965 158592964 158593030 66 GTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACAAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033212 76033211 76033277 76033212 76033211 76033277 66 GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:...........::........x.xx.x...x.........xx:.:..x.xx:..:..:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 82559753 NA +5683 chr4 + 190214555 158593368 158593367 158593522 155 TTGAACTTTTTTGTTCTCTGATTTTTATTTTAGGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTCCCAATATCCTTTTGAGGCAGAAACACCTGAATGTTGTAAGTAATCAGAGCAGTTATTT chr4 + 94230402 22981708 22981707 22981853 22981708 22981707 22981853 146 TTCGATTTTGTTGTTGTTGTTTTGTTTTGTTAGAAGACAACAATGGATGGTCTCTACAATTTGACAAACATTACAC--ATTA-GACAAAATGAAATCCCTGTACGCATTTCAGACCAAGACACCAGAGTGCCGTAAGTTATT------GTTATTT ..x:.:...x.....x.:xxx..x..x.x....:.....................:............:...x::.--:...-x.........xx....x:..:x.x...x..:.x:.:.....x..:..::......x..:------....... 76M2D4M1D59M6D7M 108/146 74.0% 146/94230402 0.0% 9/146 6.2% 135611660 54602895 +5284 chr4 + 190214555 158612112 158612111 158612208 97 TTATTTCTCCTTTTCCAGGTATCTCAGTCATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGTATGTT chr4 + 94230402 22987457 22987456 22987553 22987457 22987456 22987553 97 TTATTGATCTTGATTCAGATACCTGAGTAACAACAAGATAACCAACTTGAAGCCTCGTGTCTTTGAAGATCTCCATAAACTTGAATGGCTGTATGTT .....xx..:.xx.:...:..:..x...x.:....::......xx.:.......xx....:...........:..:.:...x............... 97M 74/97 76.3% 97/94230402 0.0% 0/97 0.0% 135624655 54589900 +5478 chr4 + 190214555 158612208 158612207 158612420 213 TTAATTTATGTGGCATTTTAT--TGCACTAGTTTTTAGATTCTAGAGATATATAAATGAATTAATTTTTTTCTTCTGGCTGTCAGGATAATTGAAGATAATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTGTAAGTACTAAACTAAAGC---AAATATTTCAATCAAAGGCAAAGA---CATGAATAAAAATTA chr4 + 94230402 22987847 22987846 22988067 22987847 22987846 22988067 221 TCAAATTATATTATCTTTTATCATCTGTTTAATTTAAGACTATAGACAACTCTCAGTCTGACATGTGTTTTGCTATAATTTACAGGATAATTGAAAATAATAGGATAAATCGGATCTCTCCATCAACATTTTATGGACTCAAATCACTTATTCTCCTGTAAGTATGGAATGAGAACTAAAAGCATTGCGTAAAAGGACAGAAAGATCATATATAATAAATA .:..x....:.x::x......--.x:::.x:x...x...:.x....x.xx.x.x.:.xx:x:.xx.x....x:.x.:::.xx.............:.....x:xx.x.:...:..:..:...:................x..x..x.........:........:x:..:x.:.:.---..::...x.:xxx..:.:..:.:.---...:x....x..x.. 21M2I153M3I24M3I15M 137/213 64.3% 221/94230402 0.0% 8/213 3.8% 135624361 54590194 +5604 chr4 + 190214555 158617104 158617103 158617210 107 TGACTTGTTTGTCTTTTCCTTTTTCAGAGTCCTGATGAATAACGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGTAAG chr4 + 94230402 22989052 22989051 22989156 22989052 22989051 22989156 105 tgttttgtttttttttt--ttttCCAGTGACATGATGAATAATTCTCTTGCTCATTTGCCTGACAAACCTCTGTGCCAATATATGCCAAGACTGAACTGGCTGTAAG ..x:......x.:....--....:...x.x.x..........:x::..::.:.:...:.....:........x..:...:.:...........:x.:.......... 17M2D88M 80/105 76.2% 105/94230402 0.0% 2/105 1.9% 135628052 54586503 +6415 chr4 + 190214555 158626798 158626797 158626910 113 TCGTTTTATTTTTATGTTCCAGGGACCTTGAAGGCAACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTGTAAGTAATATGCTATGCT chr4 + 94230402 22989415 22989414 22989525 22989415 22989414 22989525 111 TTGTTTTGTGTTTAT--CCTAGAGACTTGGAAGGCAACCACATTCATCACTTAAGAAATGTCACTTTCATCTCCTGCAGCACTTTAACTGTATTGTAAGTAATAGGATATACT .:.....:.x.....--:.:..:...:.x...........:..:...x.:.........x.x.....:..:........:.x.........x............x.x...:.. 15M2D96M 89/111 80.2% 111/94230402 0.0% 2/111 1.8% 135637383 54577172 +3197 chr4 + 190214555 158629020 158629019 158629068 49 TTTATGGGGGGTTTTTTGTTTTGTTTTTGTTTTTTGTTTTGTTTGTTTT chr4 + 94230402 12151623 12151622 12151671 12151623 12151622 12151671 49 TTTGGGGTGGGTTTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTT ...:x..x...............x...x.....x.x............. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 146477397 43737158 +4266 chr4 + 190214555 158633373 158633372 158633481 109 ATAATATCACATATTTGCAATTATTTCTCCAGGGATTTAGGAAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGTAAG chr4 + 94230402 22990995 22990994 22991101 22990995 22990994 22991101 107 ATTATATCCCACCTATGT--CTGTTTCTGAAGGGACTTGGCTAGCAACGAGATTGAATCACTTCCTGCATATGTGTTTAAGGATCTAAAGGAGCTTTCACAACTGTAAG ..x.....x..:x.x..:--:.:.....xx.....:..:.xx..:..::........xxx.....xx.::x.:.:..:.....:..:........x......:...... 18M2D89M 75/107 70.1% 107/94230402 0.0% 2/107 1.9% 135642378 54572177 +5522 chr4 + 190214555 158638004 158638003 158638087 84 ACAGGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTGTAAGTAT chr4 + 94230402 22992590 22992589 22992673 22992590 22992589 22992673 84 ACAGGAACCTTTCTTATAACCCGATCAAGAAAATACAAATAGACCAGTTTGATTTTCTAACCAAACTCAAATCCCTGTAAGTAT .......:.....:.....:..:...x.......x...::.:....:.......x...x::.........:..:.......... 84M 68/84 81.0% 84/94230402 0.0% 0/84 0.0% 135645414 54569141 +5626 chr4 + 190214555 158639235 158639234 158639374 140 TTGATTATTAATTTGATATTTTTAGCAGCCTAGAAGGGATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATGTAAGTAGATATTTTATTGTTTTTCACTGTGATGTTAATATTT chr4 + 94230402 22994536 22994535 22994673 22994536 22994535 22994673 138 TTTATTGAGAATATATTGTTTACAGCAGCTTGGAGGGCATTGAAATTGCAAACATCCAGAGAAGAATGTTCATACCACTTAGAAACCTTTCCCACATGTAAGTAGATCATTCCAGGTTGTTTTCTTTG--GTTGAAATTT ..x...:xx...x.:x.:...x:......:.:..:..x.........x....:.....:x:...:.....:.x...x....x:..:..:..:...............xx..:xxx...x..:x..x..--...:.x.... 128M2D10M 98/138 71.0% 138/94230402 0.0% 2/138 1.4% 135644699 54569856 +17220 chr4 + 190214555 158644880 158644879 158645183 304 TCTTATTTTACTTTCTCTTTGTACACCAGATATTTTAAGAAATTCCAGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGAGTATTTCCTG-GTTAAAGGAGAATTGTAGTTTTGAAATATAC chr4 + 94230402 22994839 22994838 22995143 22994839 22994838 22995143 305 TTTTTTCTGTCTTTCTTTTCCATGACTAGATATTTCAAGAAGTTCCAGTATTGTGGTTATGCTCCTCACGTGCGCAGCTGTAAGCCTAATACTGATGGGATTTCATCCCTGGAGAATCTTTTAGCTAGCATTATACAGAGAGTGTTTGTCTGGGTTGTATCTGCCATCACTTGCTTTGGAAATATTTTTGTTATCTGTATGAGGCCTTACATCAGATCGGAAAATAAGCTCCACGCCATCTCAATAATGTCTCTCTGCTGTGAGTATTCCATGCATGAAAGTAGAAAAATACTGTTTTAATCTGC .:..x.:.xx......:..:xxxx..:........:.....:........:.....x.....x..x..:..x...........:..x..:........:........:..:........:..:..x........x........:....................x:.:..:...........:........:..:..:...x.:.....:.....:..x..:..:.....x:.:.....x.....x..x...................:.x..-:.x....x....xx:..x.x..xx...x.:. 273M1I31M 238/304 78.3% 305/94230402 0.0% 1/304 0.3% 135650041 54564514 +26261 chr4 + 190214555 158646775 158646774 158647206 432 ACTATGACTCCTCTAGGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTAAG chr4 + 94230402 22997346 22997345 22997774 22997346 22997345 22997774 429 ACTATG---CCCACAGGTGCTGACTGTCTGATGGGAATATATTTATTTGTGATTGGAGCTTTTGATCTTAAATATCGTGGAGAATACAACAAGCACGCTCAGTTGTGGATGGACAGTATTCATTGTCAATTGGTGGGATCGCTGGCTATTCTGTCTACAGAGGTGTCAGTCTTACTTTTGACTTACCTGACTTTGGAGAAATACATCTGCATAGTTTATCCTTTTAGGTGTTTGAAACCCAGAAAATGCAGGACAATTTCCATTTTAGTTCTTATCTGGGTAATTGGGTTTGCTGTTGCTTTTATTCCACTGAGCAATAAGGAATTTTTCAGGAACTACTATGGCACCAATGGCGTCTGTTTCCCTCTTCACTCAGAGCAATCAGAAAGTTCAGGAAGTCAGATTTATTCTGTTGTCATTTTTTTAGGTAAG ......---..:x:......:.....::.:.................:.....:....x:.....:..x..:.x...............:.....:..x...:..........x....:.........::.x..:.....x:....:........:.....:..:.....:.....x..:..x.x:.....x.....:..............x..:...........:...x...:...::..........:......x.x:..:.::....:..:...:.x.:...x...::x..x.....:......:.....................::....................x..x..:...........:.....:x.xx........x:x...:x:...........x..x.:x......:.x...... 6M3D423M 342/429 79.7% 429/94230402 0.0% 3/429 0.7% 135649429 54565126 +3414 chr4 + 190214555 158647876 158647875 158647945 70 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACGCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:--....x......:.........:.::........x.xx.x...x::.......x...... 9M2D59M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 82614679 NA +4011 chr4 + 190214555 158648046 158648045 158648118 73 TGCACCTGTACTCCCAGCTACTTGGAAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....x.:...........:.........x.xx.x.:.x::.....:.....:..:..x:.....:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 82614841 NA +14478 chr4 + 190214555 158648494 158648493 158648720 227 AATAGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCACTGCTTCAGGTAGAAATACCAGGTA chr4 + 94230402 22998224 22998223 22998450 22998224 22998223 22998450 227 AACAGGTGTAAACTTGGCAGCTTTTCTCATCATTGTCTTTTCCTATGGAAGTATGTTCTACAGTGTTCACCAAACAGCTATTATGGCCACTGAAATTCAGAATCATATTAAAAAAGAGATGATACTTGCCAAACGCTTTTTCTTCATTGTATTTACCGATGCACTTTGTTGGATACCCATTTTTATTTTGAAACTCCTTTCTTTACTGCAAGTAGAAATACCAGGTA ..:....:.x..:.....x..x...x.......x..:..............:.....:..:........:....xx..:..x.::..x........x.:......x:................x...........:........:..x........:......:.x..:...............:.xx.....:.:.....x:.:..x..:................ 227M 185/227 81.5% 227/94230402 0.0% 0/227 0.0% 135650270 54564285 +16919 chr4 + 190214555 158651720 158651719 158652085 366 CTATAAACACTAAAACTATTTCATTTTTCTTTTTT------AGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGACAGCAAAG---GTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGA chr4 + 94230402 23000103 23000102 23000471 23000103 23000102 23000471 369 CTATAATGCCTACTACAGCTTCCTTTCTTTTTCTCTCTCCAAGGTACCATAACATCTTGGGTAGTGATTTTTATCTTGCCAATAAATAGTGCTCTGAATCCTCTTCTCTACACTTTGACTACACGACCCTTCAAAGAAATGATTCACCAGTTTTGGTACAACTACAGACAAAGAAGATCCAAGAGAGGCAAAGGCAGTCAGAAAGCTTATGGTCCATCCTTCATTTGGGTAGAGATGTGGCCAATGCATGAAATCACACCAAAGCTAACTAAGCCTGTGCTTTGTACAGACTCCTCTGATGCCTCTGTCACTACACAGTCAACAAGACTAAATTCGTACACGTAAATATGTTTGGGA------TCTTCACAGTGA ......xxx...xx..x::...x...:.:...:.:------............x....................::....x..x..:......:....:..xx.......:...:....:...x....x..:..............:.:.........:................:...:.x.::x:......---........:.x....x......x.....:.....:..:.........x....x..:..xx....x:..:...:x.....x.xx....x:...x..:...x...x::x..xx.x.:.x.x..:.....:.....x.....x..:x.:.:.x.:xx.:..::.------.....:...x.. 35M6I152M3I161M6D12M 269/360 74.7% 369/94230402 0.0% 15/360 4.2% 135651617 54562938 +3092 chr4 + 190214555 158653626 158653625 158653671 46 AAATATAAATAAATAAATAAAATAGGCTGCAATTTTTAAATTTAAA chr4 + 94230402 82570870 82570869 82570915 82570870 82570869 82570915 46 AAATGTAAAAAAAAAAATAAAACAAGCTACCATTTTTAAATTTAAA ....:....x...x........:.:...:.x............... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 76082756 NA +3315 chr4 + 190214555 158671609 158671608 158671648 40 CACTCACGTCTCCGATCTGCAGCTCCACTTCCTCCAGCTG chr4 + 94230402 23003376 23003375 23003415 23003376 23003375 23003415 40 CACTCACGTCGCCGATCTGCATCTCCACCTCCTCCAGCTG ..........x..........x......:........... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 135668233 54546322 +7550 chr4 + 190214555 158680458 158680457 158680613 156 TTTGTGCAGCATATCAGTGCTTTCATGCCTTAAAA---ATTAAGAAAAATTATCTACCT---CTATGTGCTACAAGATGGTCTTCAACTTCTACTGTGCCTCGAATTACTACCCATTATACTATTTATCCCCGGGATAAGGACAAGAGATGGGAAGGTAAGT chr4 + 94230402 23006097 23006096 23006258 23006097 23006096 23006258 162 TTTTTGCAGCACGTCAATGCTTTCATGCTCTAAAGTCCATAAAGAGAGACTGCCTTCCCTCACTGCATAAAGCAGGATGGGCATCCACTGCCACTGTGCCTCGCATAACCACGCATTATACCATTCATCCTCGGGACAAAGACAAACGATGGGAAGGTTAGT ...x.......::...:...........::....:---..x....:.:.:.::..x..:---..:::.:xx:..:.....x.x..x...x.:...........x..x..:..x........:...:....:.....:..:.....:x...........x... 35M3I21M3I100M 116/156 74.4% 162/94230402 0.0% 6/156 3.8% 135674361 54540194 +13765 chr4 + 190214555 158682151 158682150 158682429 279 TGATTATTGGGTTATATTAATCCCAGAATTTTTATTTC---TCCCAGGAGTGAACATGGAAAGGTTTGCAGAAGAAGCAGATGTTGTAATAGTTGGTGCAGGCCCTGCAGGGCTCTCTGCAGCTGTTCGTCTAAAACAGTTGGCTGTGGCACATGAAAAGGACATCCGTGTGTGTCTAGTGGAGAAAGCTGCCCAGATAGGAGCTCATACTCTCTCAGGGGCTTGCCTTGATCCAGGTGCTTTTAAAGAACTCTTCCCAGACTGGAAAGAGAAGGGGGTATG chr4 + 94230402 23006971 23006970 23007246 23006971 23006970 23007246 276 TGAAGATTGGTTTATCTAATT------ATCTTTTTTTCCTATTGCAGGGGTAAACATGGAAAGATTTGCAGAGGAAGCTGATGTTGTCATTGTTGGAGGAGGCCCTGCAGGTCTTTCTGCTGCTATTCGTCTCAAACAGTTAGCAGCTGAGCAGGGCAAAGAAATACGTGTCTGTCTGGTGGAAAAGGCATCTCAGATTGGTGCACATACCCTGTCTGGTGCTTGTCTTGAGCCACGATCCTTAGAAGAACTCTTTCCAGACTGGAAGGAGCGGGGGGTATG ...xx.....x....x.x.x.------..:...x....---.:x....:..:...........:........:.....x........x..x.....x.x............x..:.....x...:.......x........:..x.:x.x:..x.:x..:..x..x.....x.....:.....:..:..xx.:.....x..x..x.....:..x..x..x.....:.....x...x.xx.:..x:..........:...........:...x:......... 21M6D11M3I241M 211/273 77.3% 276/94230402 0.0% 9/273 3.3% 135675180 54539375 +11104 chr4 + 190214555 158684521 158684520 158685221 701 GTTTTTTTGTATTTATATTTACACTTGCAAATATAAACTAAAAACATTTCTTTTTCTTCTTTTATTTCTAGGCTCCACTTAACACTCCTGTAACAGAAGACAGATTTGGAATTTTAACAGAGAAATACAGAATTCCTGTGCCAATTCTTCCAGGTAAGGTATAGTGAATATGCATAGAACTATGGAATTCCACAGCTGGAAGGAACTACATTTCATCTGACGAAATTTCCT----CCTTTTACAGACAAGAACTGAGACCCAGATATTTGAAGGACTTACTCAAAGCTATACAGCTAGCTGGTGGGAAAGCAGGACTAGAACTCAGTTCTTTTGTCTTC---CAGTCTAGAAGAATTGAG-ATAGCCTTGTAAGCCAAGCAGGAATTTCTAACTTAGTGCTTTAATGT-TGTTTGTAATG----TAATAA-ATTAGAACTCT-----AGACCAAAATTGTAGAAAATAAGTTGAAAGTGTGACCATCAATGTAGCAC---TTATGTAGAAATACATATTGATTCGAAATTTTAAAGTATTTATGTTTTTGTAATGTCTTATCAATAAAAAGTCAGATTTATAAATTAAGCATATATTTATAGGGCTTCCAATGAATAATCATGGCAATTACATTGTACGCTTGGGACATTTAGTGAGCTGGATGGGCGAACAAGCAGAAGCCCTTGGTGTTGAAGTATACCCTGGTTATGCAGCTGCTGAGGT chr4 + 94230402 23007383 23007382 23007932 23007383 23007382 23007932 550 GTTTTTTTGTTGTTCTAGTTTGGCT-GTAAAAACAACTTGCAGCCCTGTTTCTGTTCTCTTTTTTATGTAGGCTCCACTTCATACTCCTGTAACTGAAGACAAGTTTGGAATTTTAACAAAGAAATATAGAATTCCAGTACCAATTCTGCCAGGTAAGCTTTGG----------------------------------GGAGGAGCtctttttactct------cttttctgtttcctttt-------------------cagtttttt----------------------------------------------------tttttttttttttGCTTCAAACAGTTTTGA----TTGAACGTAGCATTGTAAGTGTATGGAGAATCGCTTGC--AGTGTTTGGATCTATGTAGATGATGGCTGTAGTAACACTGATATTATTTTAAAGATAGTAGTTGCAGAA--------GAAGATACAACATCTAATGTA-CATAGGTTGTGTTATTTTGCTTAGTGTTCTG----TTTCAGGTGTGTTTGTTTGTTTCTTGCCT------------------------------------------AGGACTTCCAATGGTTAATCATGGGAATTACATAGTACGTCTGGGACACTTTGTGAGATGGTTGGGTGAACAAGCAGAAGCTTTGGGTGTGGAGTTGTATCCAGGCTATGCAGCTGCTGAGGT ..........xx..x..x..xx:..-.:...x.:..x:.:x.:x.x.x.:.:.x.::......x.x.x............x.:...........x.......::...............:.......:........x..:........x.........x.x.:.----------------------------------.:....:..x:x...xx...------x...:..----......-------------------...x.x...----------------------------------------------------:.:xx..:....xx....---....:.x..----....:-:....x.......:xx.xx::....:x..x:.--....:..x:..x.-...xx:.:...----..:...-.:.::x.:.x.-----...:x:x.:...:....--------...::.:::..xx::......-..:---..:...x:xxx.:.x..x..x.::.----...x.:..:.x.x.....x.x.xx..:..------------------------------------------...:.........:x.........x........x.....::.......:..x.....x...x....:..............::.x.....x..:x.:..:..x..:................. 25M1D138M34D20M6D7M4I6M19D9M52D18M3I9M4D5M1I32M2D13M1I11M4I6M1I11M5I17M8D21M1D3M3I25M4D29M42D123M 380/528 72.0% 550/94230402 0.0% 195/528 36.9% 135677138 54537417 +3126 chr4 + 190214555 158688533 158688532 158688602 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGTCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:...........::........x.xx.x...xxx.x.......:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 82655336 NA +6327 chr4 + 190214555 158690327 158690326 158690429 103 TTTGTTTTTTATCATTTTTA--GGTCCTTTTTCATGATGATGGTAGTGTAAAAGGAATTGCCACTAACGATGTAGGGATACAAAAGGATGGTGCACCAAAGGTAA chr4 + 94230402 23008209 23008208 23008313 23008209 23008208 23008313 105 TTTTTTTTTAAATATTTCCAAAGGTTCTTTTTCATGAAGATGGTAGTGTGAAAGGAATAGCAACTAACGATGTAGGCATTCAAAAGGATGGAGCACCTAAAGTAA ...x.....x.x:....::.--...:...........x...........:........x..x..............x..x...........x.....x..:.... 20M2I83M 87/103 84.5% 105/94230402 0.0% 2/103 1.9% 135682118 54532437 +3649 chr4 + 190214555 158690549 158690548 158690621 73 TACACCTGTAGTCCTAGCTACTTTGGAGGCTGAAACAGGAGGATCACTTGAGCCCAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...x......:.:........x::.......:x.xx.x.:.x.......:.....:..:.:x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 82657344 NA +3006 chr4 + 190214555 158692859 158692858 158692909 51 AAAAAAAAAAAAAAGATTAAAAAAAAAAAAACATATATATATATATATATG chr4 + 94230402 6934149 6934148 6934199 6934149 6934148 6934199 51 AAAAACAACAAAAAGATTAAAAAAAAAAAAGTATGTATGGTTATACAAATG .....x..x.....................::..:...:xx....:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 151758710 38455845 +8317 chr4 + 190214555 158695480 158695479 158695746 267 ATGTTTTTGCTTTTCAGGCAACATTTGAGAGAGGACTGGAACTACATGCTAAAGTCACAATTTTTGCAGAAGGTTGCCATGGACATCTAGCCAAGCAACTATATAAGAAGTTTGATTTGAGAGCAAATTGTGAACCTCAAACCTACGGGATTGGACTGAAGGAGGTATCCTGGTTTGTTTCTGTAATTTTAATTTTGA-------------AAGATGGAATTTAAATTTATTTGTATTATCAGG-TAGTTTATAATACTGATT----TAATTTTAGTTATATTTT chr4 + 94230402 23010077 23010076 23010347 23010077 23010076 23010347 271 ATGCTCTATTTTTGCAGGCTACTTTTGAACGAGGCTTGGAACTCCATGCTAAGGTCACTGTCTTTGCTGAAGGCTGTCATGGACATCTAGCCAAACAGCTGTACACAAAATACAACCTAAGGGAGAAATGCCAAGCCCAGAGCTATGGCATTGGGTTGAAAGAGGTA---TGATCTG----CATTATTTTAATGATAAGGAGAATACTGTCAAGGTAGAATGTA-----GTTTGTAT--TCAGGTTACTTTGTATAAGTCATTGCAATGATTTGAATAACAGTTT ...:.:.xx:...x.....x..x.....:x....x:.......x........:.....x:.:.....x.....:..:.................:..:..:..:.x:..:.x::.::.:..:.x:..x..:x..x.:..:.x...:..x.....::....:......---..:.:..----::.x........xx.:.-------------...:.:....x..-----:.......--.....-..x...:..xx.x.x...----.:....x.:.x.:.x... 167M3D7M4D17M13I13M5D8M2D5M1I18M4I18M 181/253 71.5% 271/94230402 0.0% 32/253 12.6% 135685403 54529152 +11193 chr4 + 190214555 158697540 158697539 158697714 175 TTGCTTTTTTTTTTTTTAGTTATGGGTTATTGATGAAAAGAACTGGAAACCTGGGAGAGTAGATCACACTGTTGGTTGGCCCTTGGACAGACATACCTATGGAGGATCTTTCCTCTATCATTTGAATGAAGGTGAACCCCTAGTAGCTCTTGGTCTTGTGGT-----AAGTTATATTCCC chr4 + 94230402 23011962 23011961 23012141 23011962 23011961 23012141 180 TTGGTGATCTTCATTTCAGTTATGGACTATTGATGAAAAGAAATGGAAACCAGGAAGAGTAGAACACACTGTAGGCTGGCCTTTAGACAGACACACCTATGGAGGATCCTTTCTTTATCACTTAAATGAGGGTGAACCTTTAGTTGCTCTTGGATTTGTGGTATGTGAAGTTATATTTTC ...x.xx.:..:x...:........::...............x........x..:........x........x..:.....:..:........:..............:..:..:.....:..:.....:........::....x........x:.......-----..........::. 162M5I13M 144/175 82.3% 180/94230402 0.0% 5/175 2.9% 135685578 54528977 +10626 chr4 + 190214555 158698979 158698978 158699179 201 TTTTTAAGGTTGGTCTAGACTATCAGAATCCATACCTGAGTCCATTTAGAGAGTTCCAAAGGTGGAAACACCATCCTAGCATTCGGCCAACCTTGGAAGGTGGAAAAAGGATTGCATACGGAGCCAGAGCTCTCAATGAAGGTGGCTTTCAGGTAACT------------------CTTCCAACTTTTATTTTCCTTGTTTCT-GTATTATAAATTCAGA chr4 + 94230402 23013324 23013323 23013543 23013324 23013323 23013543 220 TTTTTAAGGTTGGCTTAGATTATCAAAATCCCTATTTGAATCCGTTTAGGGAGTTTCAGAGGTGGAAGCACCATCCTACTATAGCACCTACTTTGGAGGGTGGAAAAAGGATTGCGTATGGTGCCAGAGCACTGAATGAAGGTGGTCTCCAGGTAATTGCTTAATGAAGTTATTTACTTTCAGATCTTGATAGCCATGTTTGTAGTACTGCAGATTCAGA .............::....:.....:.....x..::...:...:.....:.....:..:........:..........x:..xxx:..x..:.....:.................:..:..x........x..x...........::.:.......:.------------------...:..:x.:..:x.xx..x.....x.-...:.::.:....... 158M18I27M1I16M 156/201 77.6% 220/94230402 0.0% 19/201 9.5% 135685655 54528900 +11811 chr4 + 190214555 158703374 158703373 158703597 224 CTTGTTTAATATGAACTAACAAATGTATTCTGAATCTTTGTTTCCTC---AGTCTATACCAAAACTCACCTTTCCTGGTGGTTTACTAATTGGTTGTAGTCCTGGTTTTATGAATGTTCCCAAGATCAAAGGTACTCACACAGCAATGAAAAGTGGAATTTTAGCAGCAGAATCTATTTTTAATCAACTAACTAGTGAAAATCTCCAATCAAAGACAATAGGTAAGA chr4 + 94230402 23015408 23015407 23015632 23015408 23015407 23015632 225 CTTCTTCAAAATCAAACAGAAAACACA--CTTACTTTCTTTTTCCTCTGCAGTCAATACCCAAGCTCACCTTCCCAGGTGGACTGCTAATTGGTTGCAGTCCTGGACTCATGAATGTGCCTAAGATTAAAGGGACACATACTGCAATGAAAAGTGGCATGTTGGCTTCAGAAGCCATCTTTAACCAATTAACCAATGAAAATCTCCAGTCAAAGACTATAGGTAAGA ...x..:..x..x..x:.:x...:::.--..x.x.:.:.x.......---....x.....x..:........:..x.....x:.:...........:........x:.:........x..:.....:.....x..x..:..x..............x..x..:..xx.....x.:..:.....:...:....:.:............:........x.......... 27M2D18M3I177M 173/222 77.9% 225/94230402 0.0% 5/222 2.3% 135687966 54526589 +3322 chr4 + 190214555 158703970 158703969 158704041 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx:x...x..........::.:..x.xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 82670764 NA +21295 chr4 + 190214555 158706136 158706135 158706853 718 TTTACACACATTTGGGCAGTTTCGCACTTAACATTTCATGTTTTTAATAAAAGGACTCCATGTAACTGAATATGAGGACAATTTGAAGAACTCATGGGTATGGAAAGAGCTATATTCTGTTAGAAATATAAGACCGTCCTGCCACGGAGTACTGGGTGTATATGGAGGGATGATTTACACTGGAATCTTTTACTGGATATTGAGAGGAATGGAGCCGTGGACTCTGAAACATAAAGGTAATTC-----------------------------------------------AAACAAGAGTAT--------GAGTGACATGATCATTAAAAATTCATGAATGGGATCTGTTAATTAGAGAAAGTGATTGTTT---------------TAATGTTTTCAAC----TTGGAGAAATTATAAATTTAG-------TGTCT-----------------------AAGAACAGTATATTATTACTTGAGGGCTAGTCATATTTCTTTGGTGTGATAATATT-TTGAAGTTTTTATACAAATAGGCTTAAGAAAAAGTACTTCAAAATCATATTTTGTTAAGCATTTCCCTCAAAATTGTTGAAGGTTCTGACTTTGAACGGCTCAAGCCAGCCAAGGATTGCACACCTATTGAGTATCCAAAACCCGATGGACAGATCAGTTTTGACCTCTTGTCATCTGTGGCTCTGAGTGGTACTAATCATGAACATGACCAGCCGGCACACTTAACCTTAAGGGATGACAGTATACCTGTAAATAGAAATCTGTCGATATATGATGGGCCCGAGCAGCGATTCTGTCCTGCAGGTA chr4 + 94230402 23017289 23017288 23018065 23017289 23017288 23018065 777 TTTACGTACGTTAGG---------TACCTAACAAGTAATGTCCT--GCTGTAGGACTTGATGTGCAAGAATATGAAGAGAACCTGAAAAAGTCCTGGGTCTGGAAAGAGCTGTACTCGGTTAGAAACATCCGACCATCCTGCCATAGCATGCTTGGTGTGTATGGAGGAATGATTTACACGGGTATATTTTATTGGCTACTCAGAGGAAAGGAACCATGGACGTTAAAGCATCCAGGTAATTTCAGTTTCCTGAAAGAAGATGCATGTCAGTCTCTCCTGATTTTAGTTGAAGCTAGAGCATTCATGGCCAAGTGGCAAGAACTCTAGAAATCAATG----------GCTAATTGGTGAAGTGGACTTTCTACACTACCTAGCGCATCATGTACACAAAGGCATTGAAGCAGTATTCTACTTAGGCATAGGTGTCTCTCCTGAAAAGGACTTCCTCTTAGGAAATAGTTTATTCTGATAAGGAGGGAAGTCAAAAAGCTT------GATTAAATTGTTCAAGAGTGACTGCAAATT----------ACAGTAATTC-------TACTCTG--AATCTTATTTGTTAATAATGTATTAGGACCAGATTTTGCTCAGCTCAAGGCAGCCAAAGACTGCACACCTATTGAATACCCGAAGCCTGATGGAAAAATCAGTTTTGATCTCCTGTCATCTGTGGCTTTAAGTGGTACAAATCATGAACATGACCAGCCTGCTCATTTGACTCTGAAAGATGACAGCATCCCTGTGAGCAGGAATCTGGCTGTGTTTGATGGACCAGAACAAAGATTTTGCCCAGCAGGTA .....::..:..x..---------:..:.....xx.x....::.--::x:x......:x....:xxx........:..x..::....:..x..x.....x...........:..:..x........:..xx....:........::.x:.:..x.....:........:...........x..x..x.....:...x..:.x.......x...:..:.....x:.:..:...xx........:-----------------------------------------------..:.x....:..--------:....:..x..x.x:..:....:x...----------.:.....:.x...:xx..:.x.:.---------------.x....x:x...x----...:..x.:.xx.xx.:....-------.....-----------------------:::..:...x....x.x.:xx.::..xx.....x.xxx...------...x.x...-..x...xx.xxx.:.....x----------.x....x...-------..:.:..--..x.x.x.::x.:..x.x...xxx...x:.x..:....xx.:.......x.......:..:..............:..:..:..:..:......x.:...........:...:..............:.:........x....................x..x..:..:..::.:.::........:..x.....:.::..:......x.x:.:.x......:..x..:..:x....:..:..x....... 15M9D20M2D197M47I12M8I27M10D24M15I13M4I21M7I5M23I41M6D9M1I20M10D10M7D7M2D251M 482/672 71.7% 777/94230402 0.0% 151/672 22.5% 135688847 54525708 +12050 chr4 + 190214555 158708357 158708356 158708529 173 TTTTCAGGAGTTTATGAATTTGTACCTGTGGAACAAGGTGATGGATTTCGGTTACAGATAAATGCTCAGAACTGTGTACATTGTAAAACATGTGATATTAAAGATCCAAGTCAGAATATTAACTGGGTGGTACCTGAAGGTGGAGGAGGACCTGCTTACAATGGAATGTAAAC chr4 + 94230402 23018363 23018362 23018535 23018363 23018362 23018535 173 TTTCCAGGAGTTTATGAATATATCCCTCTGGAAACAGGAGAAGGATCAAGACTGCAGATAAATGCTCAGAACTGTGTCCACTGCAAAACATGTGATATTAAAGACCCAAGTCAGAACATTAACTGGGTAGTGCCTGAAGGTGGCGGAGGACCAGCTTATAATGGGATGTAAAC ...:...............x.:.x...x.....xx...x..x....:xx.::.:.......................x..:..:....................:...........:...........:..:...........x........x.....:.....:........ 173M 147/173 85.0% 173/94230402 0.0% 0/173 0.0% 135689994 54524561 +6088 chr4 + 190214555 158709705 158709704 158709836 132 TCAACACACAATAAGCAAAACTGAATCCTTTCTAAGCAAACATTTTTGCATATACTGCCTTCTCTTTATCTTTCTGTGCCTTTATCTTTTGTTTGACTTTCAGCAATTCTGCCTGGATAGCTGT---AAAATAAA chr4 + 94230402 23019467 23019466 23019593 23019467 23019466 23019593 127 TCAACATATAGGAATAAAAA--AAATC------AAGCAAACATTTTAGCGTAAGCTGCCTTCTCTTTCTCCTTTTGAGCTTTTATCTTCTGTTTGATTTTGAGTGTTTCTGTCTGGATAGCTATTTGAAAAGAAA ......:.:.:x..xx....--:....------.............x..:..x:.............x..:..:..x..:........:.......:...x..::x.....:..........:.---....x... 20M2D5M6D91M3I8M 99/124 79.8% 127/94230402 0.0% 11/124 8.9% 135690238 54524317 +8011 chr4 + 190214555 158710624 158710623 158710855 232 TTACCTTTATCTTCTGGTGCTATCCCCTGAGCTTTCTTAAGATCAGCCTTTAATTGGAAAAAAACATTTAAGT------------TAGGTGTATGATTTATAAAGGTAGTTGTCTATTTTAAAAAATTAAACATTTGGAACAAAATTTACCAATGCTTGATCATATTCTTTTAATCCTTGCCATCCTTGAGCTCTGCGGTACAATGCTTTGGTATTTGATGGGTCTAGTTCAAGAGCCTACAAA chr4 + 94230402 23020139 23020138 23020365 23020139 23020138 23020365 227 TTACCTTTGTCCTCAGGGGCAATTTCATGAGCCTTTTTAAGATCAGCCTTAA--TAGAAAGAGAAATATAAGTGAATGTTCTGattaaatatttagattaaaataataattgtt-----------attaaataCT----GTGATAATTACCAGGGCCTGATCAAGATCTTTTATTCCCTGCCATCCTTGAGCCCGTCTGTAGAGAGCTTTAGTATTCGCTGGATCTATTTGAAGAGCCTGTGAA ........:..:..x..x..x..::.x.....:..:..............x.--.:....:.:.x..x.....------------..::.:.x.::x...x..x::..:....:-----------......:.:.----:::.x.x......:x..:......x:x.......x...:..............:.xx.x...x.:x.....:.....:.x...:....x..x........:::.. 52M2D19M12I29M11D10M4D105M 155/215 72.1% 227/94230402 0.0% 29/215 13.5% 135690485 54524070 +3484 chr4 + 190214555 158712617 158712616 158712699 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGATGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::...x....x.xx.x...x...........:.:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 82679420 NA +6665 chr4 + 190214555 158713115 158713114 158713268 154 TTACCTCTAAACAACTGTCAATTGCTCCCTGCCAATTTGACATCTTCAGTTTACAAGCACCAATATTCAGTACACAGCTTAAAGCTATAGGTTGCAGCTTGGCTCTATCTGCTGTCTCAATAACAGCCTTTGAACTGTCCACGTATCTGCAGAA chr4 + 94230402 23022619 23022618 23022772 23022619 23022618 23022772 154 TTACCTCTGAACAACTTTCAATGGCTCCCTGCCAATCCGACAGTTTCAGTTTACAAGCGCCGATGTTTAAAACACAGCTTAACCCAACGGTCTTTAACTTTGGCTTGTCTCCCTCTTCTGCCACTGTTTCAGAAGCTTCTACATACCTGAAGAA ........:.......x.....x.............::....x:..............:..:..:..:.:x...........xx.x.::.x:.x:.:...x.x::.:...x.:x::..x::x..x.::.:x...x:x..:..:..:...x.... 154M 105/154 68.2% 154/94230402 0.0% 0/154 0.0% 135690496 54524059 +8875 chr4 + 190214555 158715551 158715550 158715696 146 AAAGTACTCACATCTTTTAAATCTATATCCGCATCCTCAGGGAAATCTGGATGACTGTCGCCAGAGCCATCTTTTGGGAATATTCCCCCGTCATCTCCTTCCTTCAATTCTCCACATTCTGCAATAACGCACAACTGTAAAAATAA chr4 + 94230402 23026636 23026635 23026781 23026636 23026635 23026781 146 AAAATACTTACATCCTTTAAGTCTATATCTGAATCTTCTGGAAAATCTGGGTAAGTGTCTCCTGAACCATCCTGGGGAACAATTCCCCAGTCATCTCCCTCCTTTAGCTCTCCACATTCTGCAATGACACACAACTGGGAAAAAAA ...:....:.....:.....:........:.x...:..x..:........:.:.x....x..x..:.....:.xx..:.xx.......x.........:.....:.::.................:..:........x:....x.. 146M 115/146 78.8% 146/94230402 0.0% 0/146 0.0% 135688915 54525640 +12304 chr4 + 190214555 158716995 158716994 158717230 236 TGTAACTTTTTACTTACTTTAGCAGGTTTTTCACCTTTCACTTCCACATTTTCCAATATCCTTGCCACTCCTATTCCTTTAATTACTTGGCCAAACACCACATGTTTCCCATCCAAATGAGGAGTTGGAACTGTTGTGATAAAAAACTGAGAACCGTTTGTGTTGCGGCCTGCATTTGCCATGCTCAGTAAACCCTCCCGATCATGCTGTA---GAAATAAAAATTAAAAGAAAACCAA chr4 + 94230402 23026856 23026855 23027094 23026856 23026855 23027094 239 TGTTAGATTTTGCTTACCTTAGCAGGATTTTCTCCATTTACTTCAACGTTTTCTAATATTTTTACAACCCCCATTCCTTTGATCACTTGGCCGAAGACCACATGTTTACCGTCCAGGTGAGAAGTAGGCACTGTTGTAATAAAGAACTGGGAGCCATTAGTACCAGGTCCTGCATTGGCCATGCTCAGCAGCCCTGGTTTATCATGCTGCATTTGAAAAAAAAAAAACAAAAAAACAAA ...x.xx....:.....:........x.....x..x..:.....x..:.....:.....::..:.x..:..:........:..:........:..x...........x..:....::....:...x..x........:.....:.....:..:..:..x..::::x.x........x...........:.:x..:xx::x.........:.---....x.....xx.x..:.....x.. 211M3I25M 178/236 75.4% 239/94230402 0.0% 3/236 1.3% 135690139 54524416 +9275 chr4 + 190214555 158719164 158719163 158719304 141 ATTTTCTCTACTTTACCTTGTAATGGAAATTTTCATCTTCAAATTTTTCACCATAAATACTTTCTCCACCTGTCCCATTCTGATTTGAGAAGTCTCCACCCTGAATCATAAATTTCTTAATAACTACAAAAAAGGAAAATG chr4 + 94230402 23028606 23028605 23028746 23028606 23028605 23028746 141 ATTTTCAATACAGTACCTTATAATGAAAGTTTTCATCTTCAAATTTTTCACCGTATATACTTTCTCCACCTGTGCCATTTTGATTTGAGAAATCTCCACCCTGGACCATGAACTGTTTAATTACTGTAAAAGAAAATAATG ......xx...xx......:.....:..:.......................:..x.................x.....:...........:...........:.:...:..:.x:.....x...::....:.::.x.... 141M 116/141 82.3% 141/94230402 0.0% 0/141 0.0% 135690558 54523997 +10426 chr4 + 190214555 158721305 158721304 158721496 192 GTATGAAGAATAACAAGATTAAGAAAATTT----ACACATACTTCGATGAAAAGGGCATCCTTTGAAATGGAGAGGTTTCCCAGTCGTGTGTCCAATGCCTTTTTCTCCTGTACACAGTGCACGAAAATTTTCCGCAGTTTTGGGTACGATATCTGCAAACAATTCTAAGACAATTCGACCAACTAAAAGAAAAGA chr4 + 94230402 23028774 23028773 23028967 23028774 23028773 23028967 194 GCACAAAGACTGACAC--TTAAGAGAACTTCAGAGAACTTACTTCTATGAAAAGGGCACCCTTTGTAATGGAGAGGTTTTCCAGTTGTTGCCCCCGTTCCTTTCTCTCCTGTACATAACGCACGGAAATTTTCGGCAGTTTTAGGTACAATGTCAGCAAATAACTCAAAGACGATTCGTCCAACTGAAAGGACAGA .:.::....x.:...x--......:..:..----:x..x......x............:......x.............:.....:..xxx:..x:.x.....:...........:.::.....:........x........:.....:..:..x.....:..:..x.....:.....x......:....:.x... 16M2D12M4I162M 149/190 78.4% 194/94230402 0.0% 6/190 3.2% 135692531 54522024 +5639 chr4 + 190214555 158723197 158723196 158723292 96 CGCTCACCTCGCTCCCCTCCGATGTCCACGTCAAAGAAGACTCGAGGGTTACTGGGGTTGGAGGGCTTGGCTTGGGGGGACGGGTGCGACATCTTG chr4 + 94230402 23029479 23029478 23029574 23029479 23029478 23029574 96 cgcccACCTCGCTCTCCCCCGATGTCTACATCGAAGAAGGCGCGGGGGTTGCGGGGGTTGCCGGGCCGCTCTACAGGGGACGGGTGCGACATACTG ...:..........:..:........:..:..:......:.x..:.....:.x.......xx....:xxx..xx:.................x:.. 96M 74/96 77.1% 96/94230402 0.0% 0/96 0.0% 135693718 54520837 +3094 chr4 + 190214555 158724333 158724332 158724372 40 ACACACACACACACACACACATATATATGAGGAGAACATA chr4 + 94230402 32894418 32894417 32894457 32894418 32894417 32894457 40 ACACACACATACACACACACATATATATTAGGAAACCATA .........:..................x....:.x.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 125829915 64384640 +3981 chr4 + 190214555 158728008 158728007 158728116 109 ATTTTGTGCC-----TTTGGACGAGTTACTTAGCCTCTTTGTGCCTCACTTTCCTCACCTATAAATCAGA----ATAATAA-TATGTATCTCCTAAGGTTATTATGAAGATTAAATGAA chr4 + 94230402 83501129 83501128 83501246 83501129 83501128 83501246 118 ATTCTGTACCCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTG-AGGCTAAATCAA ...:...:..-----.:...:.:.:.......:...x.x.........x...:.:.....:....x::..----...:...-..:x..:...x:.:..x....:..-..::.....x.. 10M5I55M4I7M1I24M1D12M 80/108 74.1% 118/94230402 0.0% 11/108 10.2% 75226879 NA +3868 chr4 + 190214555 158731498 158731497 158731580 83 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--....:.:...........::........x.xx.x...x.............:..x:xx:.....:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 82698301 NA +3313 chr4 + 190214555 158731769 158731768 158731853 85 CTAAAGTTGTGATAGTAAAGATGGATAAAAATGAATGGATGGGAAAGGTACAGGGGTGATCAACAGTAACAAGTGTTGGACTGGA chr4 + 94230402 6119188 6119187 6119272 6119188 6119187 6119272 85 CTGTAATTGTTACTGTAGAAATGAATCAAAATGAGTAAATGAGCAAAGAAAGGAAGTCATCAACAGAGAGAACTGTTGCTCTGGA ..:x.:....x.:x...:.:...:..x.......:.::...:.x..:.x.x:.::..x........x:.x..x.....xx..... 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 152612581 37601974 +3876 chr4 + 190214555 158736453 158736452 158736531 79 GTGGTGGATGCCTATAGTCCCAGCTACTTGGGAGGTTGAGGTGGGAGAATTACTTGAGCCCAGGAGCTCAAGGCTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:.--.:....:...........::...:....x:xx.x...x:......:.....:....:x:........ 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 82703252 NA +3347 chr4 + 190214555 158737278 158737277 158737349 72 AAAGGGAAGGGGAAGTGGAAGGGGAAGGAGAAGGAGGGAAGGAAGGGAGGG-AAGGAAGGGAAGGAAAGGAGG chr4 + 94230402 73744717 73744716 73744789 73744717 73744716 73744789 73 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG .....:..::.:...x.:........:.....:::.....::::...:...-::..x....:x......x.:. 51M1I21M 50/72 69.4% 73/94230402 0.0% 1/72 1.4% 84992561 NA +3120 chr4 + 190214555 158737291 158737290 158737356 66 AGTGGAAGGGGAAGGAGAAGGAGGGAAGGAAGGGAGGGAAGGAAGGGAAGGAAAGGAGGGAAGGAA chr4 + 94230402 21765330 21765329 21765395 21765330 21765329 21765395 66 AGTGGGAGGGGAAGAAGAAAGGTCAGAGGGAGGGAGGAACAAGAAGGGTGAAAAAGAGGCAAGCAA .....:........:....:.:xx::...:.......:.x:::.:..:x.:...:....x...x.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 136971961 53242594 +3464 chr4 + 190214555 158754968 158754967 158755046 79 GTGGTACATGCCTGTGGTTCCAGCTACTTGGATGGCTGAGGTGGGAGGATCGCTTGAGCGCAGGAGGTCGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:..:.--...:..............:.x.......x:xx.x.:.x.:.....:.x...:..x.:x:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 82721767 NA +3462 chr4 + 190214555 158760586 158760585 158760655 70 CATGGTAGCACACGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAAAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::..:.::....--....:.:............:........x.xx.x:..x::...........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 82727389 NA +9688 chr4 + 190214555 158768824 158768823 158769372 549 TGGGCCGCCCGCCCGCTCCTGGCCGCAC----CTCCCACCTC-------CCGCCTCCCGCCGGGGTTACGTGAGCCCGGGGCGGGCG-GCCGCCGGGCCAATGGCCGCCGCCGGGGCCGCCGCGCTCCTCCCGCGCCGCCGCCGCCGCCGTGGGGCTGCGGGCTCCTCCCGCAGGAGATAACTGTCAGCGCGCGAGGCGGTGGCGGGCCGGCTCAGTCATATGACCGGCAGCCGGCGGCTCCGGCGCCGAGCAGAGTTACTCAGTCGCAGCGGCCCCGCGCTCCC-----GCAAGGCTGGGCGGCCGCGCCGCCGCGATGGCCCCGCCACCGCGGCCGCCGCCCCCGGCTGCGCGCTGAGCCGC-CGGCCCCCCGAGCGCCACGGCCGGAGCTGCGGCGGCGGCATCATGGCCCCGACCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCAGCAGCGGCAGCTCCGCGGCGGCGTCTGCCCAGGGCAGGGCTCCTAAGGAAGGACCCGCCTTTAGGTGAG----GGGGCGCCGGGGGGCAATTCTGGCGCGGGACCCGAGTTGGCTTCGGTG chr4 + 94230402 23035639 23035638 23036105 23035639 23035638 23036105 467 TGAGCTACCCGCACGCACACACCCGCGCAGTGCTCGTGTCCCTTTAAGGCTGGCTCCCGGCG------CTGGGGGCGGGGTCTGGCGCGGTGCCCAGCCAATGAGAGCCGTCTGAGGGGC-GCGGTGCCTCCGCGTCCGCGTCCCCGCCGGGCGGCT-CGGACGTC----------------------------GGGCGGGAGCGGGT--GCT--GTCAGGTGACGGGCGGCTGTTGGC---------------------------------GCCCCTCGCCTCCTCTGCGCGATGCTGGGCGGCTCCACGGCCGCGGGAAT---GAAGCCGCGGCCGCCCTCC------GCGAACTGAGCCGCTCGGTGAGCCGAGCG-----GGCGGGGCGGCG----CGGCAGCATGGCCCCCACACTGCTGCAGAAGCTCTTCAACAAAAGGGGCAGTgg---------cgcggcggcccccggc---ggccgggctcccggggAGGGGCCTGCTTTCAGGTGAGCGGCGGAGCA-CGAGGAGCACCGCGGGATGAGGTTCCGCGCCGCCCTCCGCG ..:..::.....x...x.x::x....:.----...x:::.:.-------.:.x......x..------.xx.:.x.x...x.x....-.x:...x:.......:xx....:.x.:.xx..-...x.x.::.....:.xx..:.x......x.x....-...:.x:.----------------------------:.....x:.....:--...--....x:....x...:..:.x:...---------------------------------.....x...::..-----..:.x..........:x.:.x......:x:::---.xx:...........x:..------...x:.........-...:xxx.......-----.x...:..x...----.....x.........x..x.....x..........................::.---------.........x:.:.x.---...x.......:::...:..:..:..:..:.......----..:..:-..:..:...x:x.x..xxx:..x:...x.::.x.:..x.:. 28M4I10M7I13M6D19M1I32M1D36M1D8M28D14M2D3M2D24M33D13M5I32M3D19M6D14M1I14M5D12M4D54M9D16M3D37M4I6M1D41M 315/445 70.8% 467/94230402 0.0% 126/445 28.3% 135733185 54481370 +3326 chr4 + 190214555 158780904 158780903 158780977 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTCGAACCCCAGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::........x.xx.x...x.:..:......x::..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 82747700 NA +3650 chr4 + 190214555 158791964 158791963 158792046 83 CATAGTGGTGCACACCTGTGGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGGATTGCTTGAGCCTAGGAGGTTGAAGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..........:--...:..:...........::.:......x.xx.x.:.x::.....:..:..:..x..x::...::.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 82758767 NA +8602 chr4 + 190214555 158805661 158805660 158805876 216 AGATTGCAGAGTAAGACCTGTCAGCTGACACTGGCTCACATGAGAGCCATTAAGAGGGTGGTGTGGCCAATGTCAGAACAACCTTGCAGCTGAAGGCAAGTCACTGCA-----------------TTGCCCAGA-GCCATATGAACAGGTCTTGTGACCAATTAATTGACTACTACATAATCTCCAGCTAGGGTGCACAGATGGAGTGAGTCAGTCCAAGCTGCTCAACCTGTT chr4 + 94230402 23049166 23049165 23049395 23049166 23049165 23049395 230 AGGTTGC----TAGGAGTTGTCAGATGACACTTGCTCACATGAGAGCCATTAACAGGGTGTTATAGCCAGTGTTAAAACAACCTTGCAACAAAGGGCGAGTCACTGCGAAAGCAACTATGCTTTTTTTTTAAGAGGCCATATGGTTTGGTCTTGTGACTACATAATTGCCAGCTACCTAATCACATACCAGGAAACAAACACAGTTTAAGTCAATATTAGCTGTTGTATCTGCT ..:....----..:..x:......x.......x....................x......x.:.:....:...:.:............:.x:.:...:.........:-----------------..x::x...-........:x:x...........:.xx......x.x:....x.....x.xx:.:...:x:..x.x.::.xx.:.....:.x:x.....:.xx.:...:. 7M4D97M17I9M1I99M 154/212 72.6% 230/94230402 0.0% 22/212 10.4% 135756495 54458060 +3523 chr4 + 190214555 158816649 158816648 158816727 79 GTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCATGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.:...........::........x.xx.x...x.:.x.........:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 82783448 NA +10776 chr4 + 190214555 158825887 158825886 158826079 193 TAACTTCTTTTGCCCTTTTTAATCCACAGTTGGTCATGTTCGGAGTTTGACCTGAATGAGATTCGCCTGATAGTTTACCAGGACTGTGACAGGAGAGGCAGACAAGTCTTGTTTGACTCTAAAGCTGTTCAAAAGATTGAGGAGGTGACAGCTCAGGTATGAAATGCTGATTTG-----CTTTCTCCTTTTCTTTTGT chr4 + 94230402 23056551 23056550 23056743 23056551 23056550 23056743 193 TAACTTCTTGT-----TTATAATCTGCAGCTGGTCCTCGTCAGAGTTTGACTTGAATGAAATTCGCCTGATAGTTTACCAGGACTGTGAGAGAAGAGGCAGACAGGTCTTATTTGATTCCAAAGCAGTCCGTAAAATTGATGAAGCTGTGGTTCAGGTATGAAATGGTAATTTGGCTTTTGTTCTACTACTCTTTTGT .........x.-----..x.....::...:.....x.xx..:.........:.......:.............................x..:...........:.....:.....:..:.....x..:.:x..:.....x..:.:x:::.:..............x.:.....-----:x....x..x:........ 11M5D158M5I19M 151/188 80.3% 193/94230402 0.0% 10/188 5.3% 135769336 54445219 +13041 chr4 + 190214555 158831856 158831855 158832143 288 TGTAGTACACAAGACCAGCTTCCGATGTCAACATGTTAGGGGAAATGATGTTTGGCTCAGTTGCCATGAGTTACAAAGGCTCCACCTTAAAGATACACTACATACGGTGAGTCTGGGCTTCCTTTTCTAC----TAGTTTTGAGAAG--TGGAACGGTGGTATTGACTCCTTAACTCATAAATTTATTTTTCCCCTCTCCTTTTTTCCCCTCCACAGTTCTCCTCCACAACTGATGATTAGTAAAGTCTTCTCTGCTAGAATGGGCAGCTTCTGTGGAAGTACAAATAAGTAAG chr4 + 94230402 23060539 23060538 23060799 23060539 23060538 23060799 261 TGTAGTACACTAGACCGGCTTCTGACGTCAATATGCTGGGAGAAATGATGTTTGGCTCAGTGGCAATGAGTTACAAAGGCTCCACCTTGAAAATTCACTACATACGGTGAGT------GTCCTTTTCTGTGGTGTGCTTGTCAGGAGCTTGGAAC-----TGATGACTC----ACTGAAATGGCTGTTTATCCTTT------------------CAGCTCTCCCCCACAACTGATGATAAGTAAAGTCTTCTCAGCCAGGGTAGGAAGCTTCAGTGGAAGCAACAATAAGTAAG ..........x.....:.....:..:.....:...:.:..:....................x..x.......................:..:..x.................------x.........::----.:x..x.x..:..--......-----.:x......----...x.x.x:x:.:...x...::.------------------...:.....:..............x..............x..:..::.:..x......x.......:.xx.......... 112M6D12M4I13M2I6M5D9M4D23M18D80M 209/255 82.0% 261/94230402 0.0% 39/255 15.3% 135771317 54443238 +16749 chr4 + 190214555 158833495 158833494 158834008 514 CTTTCTCCTTTTCCCCCCCATCTCCGGATATAGCTTGCAAGACAGCTTTGAGTACATCAACCAAGATCCTAATTTGGGAAAACTGAACACAAATCAAAATAGTTTGGGTCCTTGTCGTACTGGAAGTAACCTAGGTAAAATCAGAGATACAAACAAATTCT--TTCTTTCTGAATACACTATTGTGGGTGTGTGTTTTGCTTTATTTGAGTTTGTCGTGGGTTTTTTTTTTT--------GCGTTATCTTTAATCTGTGTTTATTTTTTTTGTATGTGTACTTTGTTTGCCCTCTTCTATGTGTTTCCATCTCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCCGGCTCACCCGGAGTGCTTCTTTCTTTGCAGGTTTGTGTGGAATGCTGAGTACAGTGTGACCCA--------CACATATTAA-TAAATCCTGTGCAGGTTCTTAGGAAAAATCCTACTTGTGCCTCTCTAGAAATCCAAGGGGCTCTTGTGATCACAG chr4 + 94230402 23061408 23061407 23061893 23061408 23061407 23061893 486 CTTCCTGCTTTTCACTTAGTTTTCT---TATAGCTTACAGGATAGCTTTGAATACATTAGCCAAGATCCCAGCCTTGGAAAGCTGAGCTCTAATCAGAATGGCTTGGGTACCTGTCGCAGTGGAAGTAATTTAGGTAAA--------TATTTCCATATTCTATGTCTTTCTGA------TACCGTGA----------TACCATCTGTTCATTTAGGGTTGGTTTCTTTTTTTTCTCCTGTGCATCACCTTT---------TTTTTTCCTTTGCAT-TGTATTTTCTCTACATTGCTTT---TGTTTCC-----TAGGTGTGTTACAGCTGTGTAGCAGCAAACTGCTGCAGGGTGTGTCTGAAGGAGGTCCCCTCCGGCTCATCCGCAGTGCTTCTTTCTTTGCAGGTTTGTGTGGAATGCCAACCAAAGTGTGACCCATCCATAAGCACACACAAATTCAGCTCTTTCTGAATCCTTGCAAAGAATAC--ATAATCACTCTCTAGAAATAGAAAGGGCTAAGATGGTGACAG ...:..x......x.::xxx.:..:---........:..:..:........:.....:.:.........:.:::.x.....:....:.x.x.....:...:.:......x.:.....:.x.........::........--------..:xxx..x.....--x.........------..::...:----------.:.:x.x.x.xx:...:xx..x.....:.......--------..:.:.:....---------..x...::....:..-....:...x.:.:.x:.x:.:.---.......-----.....x..:.:..:x::..:....................x..:x..........x..:..........:...x..................................::.x:.x...........--------....:.:x..-.x.:::..x.x::::.:...:x:..:...x.--x.x:.xx............xx..:.....xxx:..:.x.... 25M3D111M8D14M2I10M6D8M10D35M8I11M9D15M1D22M3D7M5D126M8I10M1I31M2D42M 342/467 73.2% 486/94230402 0.0% 66/467 14.1% 135772087 54442468 +7159 chr4 + 190214555 158835373 158835372 158835493 121 AATAACATGGTTTTCTTGTTCC-TTTATCTTAGCACACAGCACACCAGTTGATATGCCAAGCAGAGGACAGAATGAAGACAGGGACAGTGGCATTGCTCGATCAGGTACTTGTACTCTGTTT chr4 + 94230402 23062898 23062897 23063019 23062898 23062897 23063019 122 AGTAACATTTTTCTATTGATCTGTTTGTTTTAGCACATAGTACACCTGTCGATATGCCCAGCAGAGGACAAAACGAGGACAGAGACAGCGGCATTGCTCGGTCAGGTATCTGCAGTTTGTCT .:......xx..:.x...x..:-...:.:........:..:.....x..:........x...........:..:..:.....:.....:...........:.......::..:.x.:...:. 22M1I99M 95/121 78.5% 122/94230402 0.0% 1/121 0.8% 135772475 54442080 +9328 chr4 + 190214555 158851302 158851301 158851473 172 TTCCAAATTCTTCCTACAGCCTCACTAAGCAGTCTTTTGATCACACCTTTCCCATCTCCAAGCTCCTCTACATCTTCTTCCAGCAGTTACCAGCGCCGCTGGCTTCGAAGTCAGACAACAAGTTTGGAAAATGGCATCATCCCAAGAAGGTGAGTT--GCAAGTTTCCTCTTGC chr4 + 94230402 23063652 23063651 23063825 23063652 23063651 23063825 174 TTCCTTGTTTTTTTGGTAGCATCTCTGAGCAGTCTTCTGGTTACTCCTTTTCCATCTCCAAGCTCTTCATCATCATCTTCTAGCAGCTATCAACGTCGTTGGCTCCGAAGTCAGACAACCAGTTTAGAGAATGGAATTATTCCAAGATGGTGAGTGTAACACCTTTCTGCTTGC ....xx:..:..::x::...x..x..:.........:..:.:..x.....:..............:..xx....x.....:.....:..:..:..:..:.....:..............x.....:..:.....x..:..:......x.......x--:..xx....:x..... 156M2I16M 131/172 76.2% 174/94230402 0.0% 2/172 1.2% 135787650 54426905 +13724 chr4 + 190214555 158859050 158859049 158859744 695 CCTCCAGGTCAACTGATGAGACATTCAGCTTGGCTGAAGAAACCTGTAGCTCTAATCCAGCTATGGTTAGGAGGAAGAAAATTGCCATAAGCATCATCTTTTCCCTATGTGAGAAAGAAGAAGCACAAAGGAATTTCCAGGACTTCTTCTTTTCTCATTTTCCCCTGTTTGAATCTCACATGAACAGGCTGAAGAGTGCAATTGAAAAGGTA-------------------------------------------ATAAGGATGTAATCCAAAGTCAAATA---GAGAAGTGAT---TGTGGGGCTTTGAAG------------------------------------------ATGGCAGAATTT---CTTTGCCGA--------TGTATC--------------------------AGATGTCTTTCCTAAGGAAGTTAAATCACCTGTAGCAGTGATAAATTTTAGGCATGTTGATGTTAGTTACCAGATACTG----------------------------GGTTACCTTAG--GGAAGGAAATG------ACTGCTTTTTCGTGACT-----GAAGGCATTATTACCT-----------------------------------TGAG----------------------TGTTGT--TAATTGATTACAT-------------------AATTTTTTT--TATTAATACAGCCCAGTAGATAAGTTATAAAATTTCTTCTCAGTAATTTGACTTG---CTTTCTCT-TCAATAAAGGCTATGATCTCCTGTAGGAAAATAGCAGAATCAAGTCTCCGAGTCCAGTTTTATGTCAGCCGTTTGATGGAAGCTCTGGGAGAATTCAGGTAAAGTGGCAAAGTTTGGCAAATCCAACAGGAGATGTTTATGAGCAGCCATGGATAAAGATAAACTGTGACTTGGAA chr4 + 94230402 23065990 23065989 23066926 23065990 23065989 23066926 937 CTTTTAGGTCAACTGAAGAAATGTTTAGTATGGCTGATGAGAGCTGCAGCTCCAATCCTGCAATGGTCCGGAGGAAAAAAATTGCCATCAGCATAATCTTCTCTCTGCCTGAAAAAGAAGATGCACAGAGAAACTTCCAAGATTTCTTTTTCTCTCACTTCCCTCTCTTTGAATCCCACATGAACAAACTGAAGTATGCAATAGAAAAGGTACAGAACACTGGTTTCTCTTAATGTGAAAACGTAAGTGTCAAACAGAATGAAGTATTCTAGAGACTGATAGGTGAAGAGTGGGAGATGTGTGG-TTTGAAGCTTCCCTCCCTCTTTATATATGTAGTCTTGAGCCTGAGCCCAGTGTTGGAATTTAGCATTTGCTGAAAAGGAGGTGTAGTTTCCTTTCTAGTCAGAATGAAAATGGAGAGTTTTCTGCTATGGATGGCTTTTCTTTTGTTCTAGTCAT--ATTTCAGTGAGGTTGTCCTGACTCCCTAGAGACTGTGGAAATGATGTTCTATCCTTTTCCTGCGGTTACTAAAAGTGACAACAAATGTTTGTTGCTGCCTTCCCCTTACTCTCAGAGATGTTTTATCATCTCCCCTTGTTTAGTTCTAGGGATTGGTCTTTCATCATGAGGTGGAGGGAGGTTGGCAGCCATTGCTGTCCCGAGTGACTGCATATCACTAGGGCTAGATCTCAATTATTTTAATGTTAATGAAGCTTAAAAAATGAAGAATGCGACTCCT--TTAAGAAGCTGTTTTGTGTCTTTAACTCTTAATCAAGGCCATGATCTCATGTAGAAAAATAGCAGAATCCAGCCAGAGAGTGCAGGTTTATATCAGCCGTGTCATGGATGCCCTGGGAGAATTCAGGTGAGTTGATGGAATTCTG-ACTTACAAGGAGAGCTGTTCTCATGTGTCT----ATAAAGAT-ATTTGTCACTTTGAA .:.::...........x..:.::..:..:x.......x..:.x...:.....:.....x..x.....:x.......:...........x.....x.....:..:..::x...:........x.....:..:..:.....:..:.....:..:.....:..:..:..x........:..........::......x:......x.........-------------------------------------------.x..x..x...x..:.:..x.x:...---..::....:x---....x..-.......------------------------------------------:..x::......---x.....:..--------....x:--------------------------...xx.:.:.x...x...x.x:xxx..x::...xx:...x..--....:..xx.x....x:x.x.x.:x.:...x....----------------------------......:xx.:--.:x.:x.....------:....:..::.x.x...-----::.x.:x....:.:..-----------------------------------....----------------------..:...--::.x...:.:...-------------------....x....--.:.....:x...::.:x.:..:.:xx..:x:.:.:..--.:.:x..x:..x:...---....xx..-.:...x.....:........x.....:..............x..:.xxx....x...x.....:........x.x.....x..:................:.:x..::::.:..:x.-.xx.x...x::...x....:x::x.::x.:----........-.x:...x....x... 212M43I26M3I10M3I7M1D7M42I12M3I9M8I6M26I42M2D35M28I11M2I11M6I17M5I16M35I4M22I6M2I13M19I9M2I37M2D16M3I8M1I117M1D30M4D8M1D15M 483/684 70.6% 937/94230402 0.0% 264/684 38.6% 135793060 54421495 +22020 chr4 + 190214555 158861324 158861323 158861801 478 TCTCTTTCTGTTCTATAGAGGAACTATCTGGAACTTATATTCTGTTCCAAGGATAGCTGAACCTGTATGGCTTACTATGATGTCCGGCACTTTGGAAAAAAACCAGCTCTGCCAGCGCTTTCTCAAGGAGTTTACACTTCTGATAGAACAGATAAATAAAAACCAGTAAGCTT----CAACTCT-----------------------CTGGAGACTTGTATGCAAATCTCATGGCCAATGTGTGTACT---GCATAGGATGTG----CCTCTTTCTGTATTGACTAAGTTGGTTGTATCTTTTTCCATTTCTCCAAGGTTTTTTGCTGCCTTACTGACTGCGGTGTTAACCTACCACCTGGCCTGGGTCCCAACTGTCATGCCTGTGGATCACCCTCCCATCAAAGCCTTCTCAGAGAAACGTACCTCCCAGTCAGTGAACATGCTGGCCAAAACACATCCGTATAATCCTCTTTGGGCACAGCTGGGTTAGTACCTAATTTGACTATTCAG chr4 + 94230402 23067669 23067668 23068173 23067669 23067668 23068173 505 TTTTTTTTTTTTGAGCAGAATTACCATCTGGAACCTATATTCTGTTCCAAGGATTGCAGAGCCAGTGTGGCTTAATATGATGTCCAACACCCTGGAAAAGAACCAGCTATGCCAGCGTTTTCTTAAAGAATTTACATTTCTGATAGAACAGATCAACAAAAATCAGTAAGCTTTCTTCCACTCTATACCTCCTACCATCAGTATTTCCTGAAAGCTTGCGTGCT--TCCCAGAGCATGTAGATATGTTCAAGCATTTAATGTGATATTCTTTTGCTAGTGTTACTTGGATGATGTTATCTTT----ATTTTTCTA-GGTTCTTTGCTGCTTTGTTAACTGCGGTGCTGACGTATCATCTGGCTTGGGTCCCAACAGTAATGCCAGTTGACCATCCTCCTATAAAGGCCTTCTCTGAGAAGCGTACTTCACAGTTTGTGAACATGCTCGCAAAATCCCATCCATATAACCCTCTTTGGGCACAGCTTGGTCAGTGAAAAATTGAAAGCTTCAG .:.:...:.x..xx::...:xx..:.........:...................x..x..:..x..:.......x..........::...::.......:........x........:.....:..:..:......:................x..:.....:..........----.x.....-----------------------...:.::....::...x--..:..x:..xx:.:x:.:.::.---....xx:.....----:..:..x..:xxx.x...x:.x..:.xx.......----....:..:.-....:........:..::.:.........:.:..x..:..:.....:...........x..x.....x..x..:..:.....:..x..:........x.....:.....:..x....:x...........x..x...x.x.....:.....:.................x...:...:xxx....x:.xxx..... 173M4I7M23I17M2D22M3I12M4I35M4D9M1D196M 357/471 75.8% 505/94230402 0.0% 41/471 8.7% 135793655 54420900 +23228 chr4 + 190214555 158868090 158868089 158869432 1343 TTTGCTCTCTAGGTGATCTTTACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGAAGCAGAAGGACTTAGTCCAGCGAATACTTTATGTCCTGACCTACTTTCTCCGTTGCTCTGAGCTACAAGAGAACCAGCTGACCTGGAGT--GGCAATCATGGTGAAGGTGACCAAGTTTTAAATGGGAGCAAGATCATAACAGCCTTGGAGAAAGGAGAGGTGGAGGAGTCTGAGTATGTGGTCATTACGGTGAGGAACGAGCCCGCTCTTGTACCCCCCATCCTACCACCAA----CAGCAGCAGAGAGACACAACCCCTGGCCGACAGGGTTTCCTGAGTGCCCAGAGGGCACTGACA--GTAGAGACCTGGGTCTTAAACCTGACAAAGAAGCTAACAGG--AGGCCAGAGCAGGGTTCTGAGGCTTGCAGCGCAGGGTGCCTGGGGCCAGCATCAGACGCTTCCTGGAAACCTCAGAATGCATTTTGTGGGGATGAGAAAA---------ATAAAGAGGCACCGCAAGATGGCTCTTCAAGACTTCCCAGCTGTGAAGTTTT---GGGGGCAGGAATGAAGATGGACCAGCAAGCTGTCTGTGAGCTGTTGAAAGTGGAGATGCCTACAAGACTGCCAGACCGGTCAGTGGCCTGGCCTTGCCCTGACAGACATCTCCGGGAGAAACCTTCCTTAGAAAAGGTCACTTTCCAGATTGGAAGCTTTGCATCTCCAGAGTCTGACTTTGAAAGCCGCATGAAAAAAATGGAGGAACGGGTGAAGGCCT---------------------------GTGGCCCCTCCTTGGAGGCCAGTGAGGCTGCTGATGTGGCTCAGGACCCGCAGGTTTCTAGGAGCCCTTTTAAACCTGGCTTTC------------AGGAGAATGTTTGCTGTCCTCAGAATCGGCTTTCAGAGGGGGATGAAGGCGAGTCTGACAAGGGTTTTGCAGAGGACAGAGGCAGCAGAA----------ACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGCTGACTTGGGCAC---AGCCTCCCACGGTGCAGGAGGAACGGGAGGGAGGAGGCTGGAGGCCACTAGAGGTTTGTATGTGAAGGCTGCGGAAGGACCTGTGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGGG---CCCTGGCCTCGTGGCTGGTGCGAATATCCCCTGTGGGGATGACAACAAGAAGGCCAACTTCAGGACTGAAGGAGACATTCCCCGAAATGAAAGCTCAGATAGCGCCCTGGGAGACAGTGACGACGAAGCCTGCGCTTCAGCCATGCTAGAT---CTGGGTCACGGTGGTGACAGGA------CTGGAGGGTCCTTGGAAGTGGAGCTGCCTCTGCCAAGGTAA chr4 + 94230402 23071420 23071419 23072759 23071420 23071419 23072759 1340 TTTCCTGTCTAGGTGATCTCTATGGTGCCATAGGCTCTCCAGTTAGATTGACTCGAACTGTTGTTGTTGGAAAACGTAAGGAGTTGGTGCAGCGCTTGCTCTATGTTCTAACTTACTTCATTCGGTGCTCTGAGCTACAGGAAAATCAGCTGACATGGAGCGAGGCAGT--TGGAGAAGAAGAACAAGTGCTAAATGGAAGCAAGATCACAACTGCACTAGAAAAAGGAGAGATAGAAGAGTCTGACTATGTCGTTGTCACTGTCAAAAATGAACCTGCTCTTGTGCCTCCAATCCTACCTCCAAAGAGTGATCGAAATAAGAACCATACTATTGCAGAGTGGGTAT----ATAACCCAAAGGGCACTTACACTGTGCCAACCT---CTTCAAAAGAAAAGAAGGAAATAATAGGAAAAGTCAG-TCAGAATTCTGAAACAT---CTGTTGACTGTCT--AACTAGCA-------CTTT------ACATAAAGGAGCAACTGATAGTGGGAAAAGAATTGTCACTGATACAGGAGCTGTGCCCTACCATTTTGAAGAGCCATCTAATTTGGAGGATTTAACGGATGTAAGGAAGAACAAAAACCAGAA-------TGAAAG-----AAAAGTGGAAAAGC------AGTTGTCTAGTAGGTCGTCTGCTTTACCTTGTCCTGAAAGGTCTGGCCACAGGAGTTTACATTTAGAAAAAGTCACCTTTCAGATTGGAAGCTCTGCATCGCCAGACTCAGACTTAGAAACTCGAAGGAGAGAAATGGAAGAGAATCTGAAGGTATTGAGAAAAAATACAGAGGTAATAATACATTGTGCCTCAAGTTCTACAAATCTGACTGTGGATGCTTCCCAGAATCAAAAAG------AAAGC---TGTGAAACTGCCTCTTTGCCATACAGTAAGCACAGTATTTGTTATGCACAGATCCCATTTTGTGAGGGACAGGGGAGTATCCTTAATAACCAACATATGGAAAATAAAGG-AACTGAAGGAAATTTAGAGAACACAGTATCAGGTG-----AAGTACTTTTGTCA-ATTGATAACATAGAAACTGTAACATTGCCAAGTGAAAAAGAAACTAGA--------ACTTCATGCT-CTGGCAATCTG-----GAGAGCTATTCACCTGGCTGTGTAGAAGTAGATTCTGC-------TGTCAAAAGAGAGTCCCCTAAAC---TAGGTGTTAAAGATGTCCCCTGTGGGGATGCTAGAAGGAAAACCCCTTTCAGAGTTGAGGGGGACATTCCAAGGAATGAGAGTTCAGACAGTGCTCTTGGAGCCAGCGATGAAGAAG---GTGATTGTTGTATTCCTGATGAAGTGCGTCACGATAACGTCAGCAAACGACTTGAAGAGTTTGCAGAAGTGGAACTTCCTTTACCAAGGTAA ...x..x............:..:..x.................x...:.......x..:..x..x..x..:..:.:x.....x..:..x.....xx.:..:.....:..:..:.....:x.:..x..............:..:..:........x.....:--....:.--...x....:x..x.....x:.......:..........:...x..x:.:..:.........:.:..:........x.....x..::.:..x..x.::..:..:..:........:..:..x........x....----::::x.x.:x:...xx..xx.:x.x..x..xx....x.----.xx:....:........x...--..:xx:....---::.:...xxx:.x:...:.:x...:...--.:.:...-x...::......::.x.---x:.:x.:x..:..--::.:....-------...:------..x.x.:::x...x:.x:.:.x.:x:.:.:..---------...x..::..xx:..xxx.:x::.:.xx.:::.:x:.:.::.xx..:.x...---..:x.:.:.:.x...x.x::.....x.-------..x:..-----:........:.x..------:::..:.x:::x....:x:x..:.x:.....:.....x..::x.xx..:x::..:x::x:x:........:.....:..:.............:......x.....x..x.....x....x:..x.x..:.:.......:..:x:xx......:x.---------------------------:.x.:x....xxxxxxx:.x.:.xx.:...:x....:xx.:...:.:.x:x.:.------::...---.x.:..x...x..:.:------------..x.x.:.:....:.:.x.x....x:.x::...xx.....:x.x.:::.::xx::.:.:..xx:x:x.:::..::.:.:...-.:.x...----------.x:...::.:.x...:.:-----::.:.x:.:x.:..-::..x.:..x.:.:x..---.:.x.:x.xx:...x.::..:...x:..--------:..xx.x..:-..:.x::.:..-----..::...::xx.xxx:x.....:x.:..:xx:..x:x.-------....x.:x.:.:---....::x.---.:.x..x.:x::..:...............x:.:x.:...::..xx:.....:::...:..:........xx.:.....:..:.....:..:..:..x....x...:..:..x....---.:.x..xxxx:..x.:x...---x..x......:.:::.x...x.------:..:..:..::x::........:..x...:.:......... 161M2I6M2D134M4I38M4D21M2I10M3D28M2I7M1D17M3D13M2D8M7D4M6D32M9I52M3I27M7D6M5D14M6D156M27I54M6D5M3D16M12I82M1D7M10I18M5D14M1D17M3I28M8D10M1D11M5D38M7D12M3I8M3D117M3D20M3I22M6I41M 783/1254 62.4% 1340/94230402 0.0% 175/1254 14.0% 135796670 54417885 +7501 chr4 + 190214555 158870304 158870303 158870475 172 TTGTTTTAGGTCTCAGAGCATCAGCACCCAGAATGTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCCTGATCTTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGAAGCAGTGCCTGGTGGCCGACCTTGTCCACACAGTCCATGTAAGT chr4 + 94230402 23073501 23073500 23073672 23073501 23073500 23073672 172 TTATTTCAGATCAAACACAGTCAGCAGACAGTGTGTGAAAAACTTCGGAAGATCACTTCTAGGTGGTTACTGTCATACATATGTGCCTGATCTAGTGCTGCATGGAGTAAATAATGATGAAAAACTTAAGCAGTGTCTACTAGCAGACCTACTTCATGCAATGCATGTAAGT ..:...:..:..xx.x.xx:......xx...x:...:.::.....:..xx.x........:.xx..:.....:.x:.....::..........x.....x.....:::x:::.:......:..:..x........:..:x.:..x.....xx.:..::..:.x......... 172M 118/172 68.6% 172/94230402 0.0% 0/172 0.0% 135796803 54417752 +3343 chr4 + 190214555 158873347 158873346 158873384 38 GTGGTGGTTTTTTTTGTTTTGTTTTGTTTTTGTTTTTG chr4 + 94230402 21162763 21162762 21162800 21162763 21162762 21162800 38 GTGGTGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTG .......x.............................. 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% 137710584 52503971 +3134 chr4 + 190214555 158874952 158874951 158875016 65 CAGCGG-GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAG chr4 + 94230402 76033199 76033198 76033264 76033199 76033198 76033264 66 CAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:..-.::.x......:...........::........x.xx.x...x::.......:.:.:.. 6M1I59M 48/65 73.8% 66/94230402 0.0% 1/65 1.5% 82841753 NA +3349 chr4 + 190214555 158889057 158889056 158889130 74 GTGGCACATGTCTGTAGT-CCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCTCAGGAGCTTGAGGTT chr4 + 94230402 76033201 76033200 76033273 76033201 76033200 76033273 73 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ....::..:..--.....-...........::........x.xx.x.:.x.......:.:...:.....x:..:. 11M2D5M1I56M 55/72 76.4% 73/94230402 0.0% 3/72 4.2% 82855856 NA +15389 chr4 + 190214555 158891432 158891431 158891674 243 TGTTTCTTTTTCAGCATCCAGTCCTGGATGAGCCAATAGCTGAAGCTGTCTGTATTATCGCAGACACGGATAAATGGAGTGTGCAGGTAGCTACAAGTCAGAGGAAAGTGACGGACAACATGAAACTAGGCCAGGATGTCCTGGTCTCTAGTCAGGTGTCCAGTTTGCTTCAGTCCATTTTACAGCTCTATAAGCTTCACCTCCCTGCTGATTTTGTAAGTACTGGTTCTTATATCACCAAAG chr4 + 94230402 23074810 23074809 23075052 23074810 23074809 23075052 243 TGTATCTATTACAGCATCCAGTGCTAGATGAACCAATAGCAGAAGCTGTCTGTATTATTGCAGACACAGATAAGTGGAACGTACAAGTAGCTACAAGCCAGAGAAAAGTGATGGACAGTATGAAGTTAGGCAAAGATGTCTTGGTATCAAGTCAAGTATCCAGTTTACTGCAGTCTATTTTACAGCTTTATAAACTCAACCTTCCGGCTGACTTTGTAAGTATTTCTTTACTGAAAACCAAAG ...x...x..x...........x..:.....:........x.................:........:.....:....::..:..:...........:.....:.......:.....::.....::.....x.:......:....x..x.....:..:........:..x.....:...........:.....:..:x....:..x.....:..........:.xx..:x:xx.xx....... 243M 195/243 80.2% 243/94230402 0.0% 0/243 0.0% 135816622 54397933 +8863 chr4 + 190214555 158895738 158895737 158895879 142 TTGGCTTTGCAGTGCATCATGCATCTTGAAGATAGACTACAGGAGATGTACCTTAAAAGTAAAATGCTATCTGAATATCTCCGGGGACACACACGAGTCCATGTGAAAGAATTAGGTGTCGTACTGGGGTGAGTTCTGTGAA chr4 + 94230402 23079852 23079851 23079993 23079852 23079851 23079993 142 TTGTGTTTACAGTGCATAATGCATCTTGAGGATAGACTACAAGAGATGTATCTCAAAAGCAAAATGCTTTCAGAATATCTGCGAGGACATACAAGAGTGCACATAAAAGAACTAGGAATTGTATTAGGGTGAGTATTGTAGA ...xx...:........x...........:...........:........:..:.....:........x..x........x..:.....:...x....x..::.:......:....x:.:...:.:........x:...::. 142M 113/142 79.6% 142/94230402 0.0% 0/142 0.0% 135815886 54398669 +8746 chr4 + 190214555 158904429 158904428 158904735 307 TTTTAAAGTAATATTCTTTTCTTTTCTCAATATTCAGGATTGAATCCAACGACCTGCCTCTGTTGACTGCTATTGCCAGTACTCATTCTCCTTATGTGGCTCAAATACTCTTATAAGCTAAAG-CTCAGGACAGTTCTTCCTTGGAAGAAAAAAATCAAATTCTCAACTGAAGGAGAAAGGAATAAGCT---CTCTGTGATGTCAAAAGCATGAGAAGAGCAAACAGAAACA-GTCATTCCACCTTTTTGTTTTGTGTTTTTGCTGTCAAGCTGATGCTTCATT-GAAGACTTAGGTTTACTTGACATAATAG chr4 + 94230402 23081527 23081526 23081825 23081527 23081526 23081825 299 TTTTAAAGTCTCTCTTTTTTTTTTTTTC----CTCAGGATTGAATCCAATGACTTGCCTTTGTTGGCTGCTATAGCAAGTACACATTCCCCATACGTTGCTCAAATACTCTTATAAATTAAAATCTCAGGATAGTCATTCCCTTAAAATAAAGAATACGGGCAT--GTTGGAAGAGGAACAGAGGTGCCAAACACTGGTAAATGGGAACACTGAGAAAAGCAGATAACTGTACCTTCTACCACCTTTCCATTCCA-ATTTCAGCTG-------GATGCTTGGTCGGAGGACTTCAGTTTACATAATCTAAAAG .........xx:x:.:....:....:..----:................:...:.....:.....:.......x..x.....x.....:..x..:..x..................::....:-.......:...:x....:.x:..:x...:...xx::x:x.--::..:.:...:..x::.x:x..:---.x...xx.x:.x::..xxx......:....:.:.:xx::.-x.:x.x........:::..:::-:...:x....-------.......x:.:-..:.....x:......x.:.:x...x.. 28M4D91M1I40M2D23M3I40M1I22M1D10M7D11M1I28M 199/293 67.9% 299/94230402 0.0% 20/293 6.8% 135822902 54391653 +3680 chr4 + 190214555 158921302 158921301 158921384 83 CATGGTGGCATGCATTTGTAATTCCAGCTACTTGGAAGGCTGAGGCACAAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--....:x....:.............:.........x.x::x...x::.........:.:..x:xx:..:..:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 82888105 NA +3536 chr4 + 190214555 158942648 158942647 158942719 72 GTGCCTGTAATCCCAGCTACTTGAGAAGCTGAGGCACGAGAGTCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:............:.:......x.x:.x..:x...........:.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 82909442 NA +3068 chr4 + 190214555 158974201 158974200 158974274 74 TATTTGTATTTTAAAAGTAAAACAATGAACAAAAAAAAAAATCAATGAATTATAGAAATAGGTGAAAAAAGCAG chr4 + 94230402 81451930 81451929 81452003 81451930 81451929 81452003 74 TATTTCTGTCTTAAAAGGAAAACAATAAACAAACAAAAAGAGAACTGAAACATAAGACCTGAACAAATGAGCAG .....x.:.:.......x........:......x.....:.xx.x....x:...::.x:x.:xx...x:..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 77522271 NA +3165 chr4 + 190214555 158993237 158993236 158993309 73 TGCCCGGGTAGTCCCAGCTCCTCAGGAGGCTGAGGCAGGAGGCTCATTTGAGCCCAGAAGTTTGAGGTAGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x..x.....:......x..::::........x.xx.x.:xx..:....:........:..x:..:x.:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 82960032 NA +3322 chr4 + 190214555 158999024 158999023 158999099 76 CATGGTGGCACACACCTGTGGTCCCAGCTACTTGAGAGGTTGAGGCTGGAGGATTGCTTGAGCCCAGGAGGTCAGG chr4 + 94230402 76033197 76033196 76033270 76033197 76033196 76033270 74 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGG ..::....::...:--...:..:............:...:....x.:x.x.:.x::.....:.....:..x.:x.. 14M2D60M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% 82965827 NA +3532 chr4 + 190214555 159007930 159007929 159008033 104 AATGTCTTTAAGAAATGGTATATTTCACCTGGCACAGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGGGGTGGGAGGATTTCTTGAGCCTAGGAGCT chr4 + 94230402 76033177 76033176 76033266 76033177 76033176 76033266 90 AATGTCATGAAAGGATGATA------------CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......x.x..:::...:..------------........--...:.x......:...........::......:.x:xx.x.:.x:x.....:..:..:.... 20M12D8M2D62M 66/90 73.3% 90/94230402 0.0% 14/90 15.6% 82974753 NA +3090 chr4 + 190214555 159014725 159014724 159014785 61 TCCAATTTTTTGGCTTCCCTGGGTTACATTGGAAGAAGAATTATCTCAGGCCACACATAAA chr4 + 94230402 65178290 65178289 65178350 65178290 65178289 65178350 61 TCCAACATTTTAGCTTGCTTGGGTTGCACTGAATGAAGAGTTGTTTTGGACTGCATACAAA .....:x....:....x.:......:..:..:.x.....:..:.:.::.:.::..:.:... 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 93836435 NA +3335 chr4 + 190214555 159014870 159014869 159014951 82 TGTTGGGTCACATTCGAAGCCATTCTAGGCTGCATGCAGCCCGTGGGCCACTGGTTGGACAAGCTTGATTTACATGTACCTT chr4 + 94230402 18433799 18433798 18433869 18433799 18433798 18433869 71 TGTGGGGTCACATTACTGGCTGTCTAGGGCTGCATGCAGCTCGTGGGCCCTGGGTTGGA-----------TACATGTGCCCT ...x..........xxx:..::.::x:.............:........x:x.......-----------.......:..:. 59M11D12M 54/71 76.1% 71/94230402 0.0% 11/71 15.5% 140581071 49633484 +3065 chr4 + 190214555 159034893 159034892 159034934 42 AAAAAAAAACCCAAAAAACAAACAAAAACAAAAAACATATGT chr4 + 94230402 12903742 12903741 12903783 12903742 12903741 12903783 42 AAAAAAAAAACCAAAAAACAAACAAAACCAAAAACCATCTGT .........x.................x......x...x... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 146131151 44083404 +3581 chr4 + 190214555 159037762 159037761 159037848 87 GACCTTGTCTCAAAAACAATATATAC------ACACACACACACACACACACACACACACACACACACACACATATATATATGTATGTATTTA chr4 + 94230402 74526034 74526033 74526126 74526034 74526033 74526126 93 GACACTTTCCTGAAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ...x:.x..:::....:.x.:..x.:------....xx.x.:x..............::x...:.....x.:.....::...:.......... 26M6I61M 62/87 71.3% 93/94230402 0.0% 6/87 6.9% 84511728 NA +3058 chr4 + 190214555 159040124 159040123 159040177 54 TATATATATGGTACTTAAATATGTGTGTGTGTGTGTGTGTATATATGTATGTAT chr4 + 94230402 27325504 27325503 27325556 27325504 27325503 27325556 53 TATACACCTGA-ACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ....:.:x..:-....................:.......:..::.::..:... 11M1D42M 42/53 79.2% 53/94230402 0.0% 1/53 1.9% 131714620 58499935 +3530 chr4 + 190214555 159052358 159052357 159052431 74 AAGTAGACCCTGAAAACAACAACAACAACAACAACAACCAGCAACCAACAACCAACACAACCCCTGCACACGGT chr4 + 94230402 63629008 63629007 63629081 63629008 63629007 63629081 74 AAGTGCAGCTTTAAAAAAGCAACAACAACAACAAAAACCAACAAACAGCAAACCAAATCACTCCTGAACACAAT ....:x.x.:.x....x.:...............x.....:...x..:...x.x.x.:x..:....x....::. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 95423350 NA +3714 chr4 + 190214555 159055579 159055578 159055670 92 GTGTGCCTGTAGTCCCAGCTAATTGAGGAGCTGAGGCTGGAGGATCACTTGAGCCCAGGAAGTTGAAGCTGCAGTGAGACAAGATTATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::.x......:.......x....:::......x.:x.x.:.x.......:.....:.:x..x::....:..------..x..x...... 74M6D12M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 83022375 NA +3607 chr4 + 190214555 159060955 159060954 159061027 73 TGCACCTATAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCACCTGAGTTCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x.:................::........x:xx.x.:.x...:...:::...:..x.:x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 83027750 NA +3057 chr4 + 190214555 159072403 159072402 159072468 66 TTTTCTGTTATAGTGTTTTAATGATGCTCATTGTTAATCTTATGAATTCTTTTTTTTTTTTTTTTT chr4 + 94230402 91174862 91174861 91174927 91174862 91174861 91174927 66 TTTTTTGTTGTGGCTTTTTATTGCTGGTTTGCCTTAGGGTTGTAAATTCTTTTTTTTTTTTTTTTT ....:....:.:.:x.....x..x..x.:xx:x...:xx..:.:...................... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 67897541 NA +3562 chr4 + 190214555 159089708 159089707 159089804 97 ACACATGGTGCTGCATGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTAAGCCCAGGCGGTCGAGGCTGTGGTAAGCCATGAT chr4 + 94230402 76033194 76033193 76033285 76033194 76033193 76033285 92 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA---CATGAT .:...::...x....:.--..:...:...........::........x.xx.x.:.x::...:.:.....:x.x.:x:......:.x.---...... 17M2D69M3D6M 65/92 70.7% 92/94230402 0.0% 5/92 5.4% 83056514 NA +3869 chr4 + 190214555 159096327 159096326 159096400 74 GTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATCACTTGAACCCAGGAGCCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........::::........x.xx.x:..x.............:...:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 83063123 NA +3795 chr4 + 190214555 159103771 159103770 159103902 132 GGGCCCGCTGGGGCCAGGAGGAGCCGCCACTGTCCCCCGAGTGGAGCCGGGGAGGCGTGTCGAGCCAGGGCCGGAGGAAGCCGGCGGAGCGGCGAGGAAGAGGAGGAGGAGGAGGAAGGGGAGTTCCGCCTG chr4 + 94230402 91076186 91076185 91076313 91076186 91076185 91076313 128 GGGCTGCCCGGGCTCAGGGGGTGGTTC----GTCCTCAGAGTGCTGTGGGGCGGCCGCGTCCATCCGGTGAAGGGAAAGCCTGTCGGGACGCCGAGGGATGGGATGTGGAGGTGTGAGGGGAGATCCGCCTG ....:xx.:...x:....:..x.x:x.----....:.x.....xx.:x...x:.x..:...x.x..:.x.xx..:::.:x.:.x...::..x.....:.x:...x.x.....x.x:.......x........ 27M4D101M 82/128 64.1% 128/94230402 0.0% 4/128 3.1% 68027585 NA +3211 chr4 + 190214555 159108368 159108367 159108429 62 ATTTCACAGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTAAGGAGAAGATGACCACCTTGGT chr4 + 94230402 23997652 23997651 23997713 23997652 23997651 23997713 62 ATCTCACAGAAATTGCCTAAACTTTTTTTTTTTTTTTTTAAGTTGGAGATTACCACTTCAGT ..:........x..x.:.xxx:....................xx.:....x.....:.::.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 135110716 55103839 +4066 chr4 + 190214555 159113606 159113605 159113684 79 GTGGCGCATGCTTGTAATTCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.............::........x.xx.x...x.............:..x.xx:..:..:.. 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 83080405 NA +3018 chr4 + 190214555 159113744 159113743 159113797 54 AAAAAAAAAAAAAAAAAAGTATCTTTTTTTCCAGTTTAATAATTTACTCTTAAT chr4 + 94230402 64722542 64722541 64722595 64722542 64722541 64722595 54 AAAAAAAAAAAAAAAAAAGGATTTTTTCTCCCATTGGATTATTTCACTCTGAAT ...................x..:....:.:...x.xx.x..x..:.....x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 94391202 NA +3228 chr4 + 190214555 159128923 159128922 159129000 78 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAAATCTAT-TTTAAGTATATTTTTTGG-----AATACATATTTGT chr4 + 94230402 72321894 72321893 72321976 72321894 72321893 72321976 83 TGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCT-GATCTACATTTTAATATATATTTCAGAAAAAAATGTAGATTTGT .....xx:...............:....:........x.-:.....:-...x.:.....x...::.-----...::.x...... 39M1D7M1I18M5I13M 61/77 79.2% 83/94230402 0.0% 7/77 9.1% 86807029 NA +3292 chr4 + 190214555 159128933 159128932 159129003 71 TGTGTGTGTGTGTATATATATATATATATAAATCTATTTTAAGTATATTTTTTGGAATACATATTTGTAGA chr4 + 94230402 76787414 76787413 76787484 76787414 76787413 76787484 71 TGCATATATGTGTATGTATATTTACATTTAAATCTATATTAATGAGTTCTTTTGGGCAATACATTTGTAAA ..::.:.:.......:.....x..:..x.........x....xx.xx.:......:xx.:.:.......:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 82341519 NA +3313 chr4 + 190214555 159131511 159131510 159131595 85 TAATTGCTATTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTTTTGCTGTTGTTGTTTTTGTTCAGTCAGCTATACTATTTGGAGTT chr4 + 94230402 71033457 71033456 71033541 71033457 71033456 71033541 85 TAATTTCTTTTTTTTTCTTTTTTTCTGTTGTCTGCTCTTTATTGCTCTTACTGTTTTGTTTCAGTCTGTTTTCCCATTCAAAATT .....x..x.......:.......:.x..x.:.x:.xx:.x.....x..::......xx.......x.:.x.x.:...:::.:.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 88098054 NA +7216 chr4 + 190214555 159159768 159159767 159159941 174 ACTGACAGTGTGAACAATAGTGTTCTCAACTCGTATAGCAGCATCCTATTTATAGATGGAAGCAGCTGCATCCTTTTTCTTTATTTAGGAGGAATACTATTGTTCTCAGATCATCAGGTGGATGATCCTGTGGGGAAAATGTGATTGAGCCAATTATAACACAGGTATTATTGA chr4 + 94230402 23170576 23170575 23170741 23170576 23170575 23170741 166 ATTGACTGCTGACACAATAGCGCTCACATCTGATACAACAACATCTTATTTATAGATGGAAGCAGCTGCATCCTCTGTCTTTGCAGGCAAGAAACTCTATTGTTATCAAATCACCAGGTTAATGAGACTGTGGGAAA------ATGGAGGCA--TGCTATAAAGGTATTATTAA .:....x.:xx:x.......:.:..x..x..x:..:.:..:....:............................:.x.....::xx:x:..:..:x........x...:....:.....x:....xx.......:..------..x...x..--.::x.:.x..........:. 137M6D9M2D20M 121/166 72.9% 166/94230402 0.0% 8/166 4.8% 135989192 54225363 +3715 chr4 + 190214555 159166185 159166184 159166256 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 83132979 NA +5155 chr4 + 190214555 159186640 159186639 159186717 78 AGGATCTGGAAATAGTATATTCCTATTTACATGGTATGGAAGCCTTATCAAACTTGAGGGAGCATCAACTTAGGTATG chr4 + 94230402 23189684 23189683 23189761 23189684 23189683 23189761 78 AGGATTTGGAGATTGTGTATTCATATTTACATGGAATGGAAGCCTTGTCTAATCTGAGAGAACATCAGCTAAGGTATG .....:....:..x..:.....x...........x...........:..x..::....:..:.....:..x....... 78M 64/78 82.1% 78/94230402 0.0% 0/78 0.0% 135996956 54217599 +3004 chr4 + 190214555 159187295 159187294 159187365 71 TTCCTCCTCCCCTTTTTTTTCTCTGTCTCTCCCCATCCCCCTCCACTTCCCTCCCTTCCTCTCTCACTTCT chr4 + 94230402 82640239 82640238 82640309 82640239 82640238 82640309 71 TCCCTCCTCTCCCTTTTCTTCTCTGGCTTTGGGCATTCTCCCCTCCTCTCCACCTTTTCTTACCTGCCTCT .:.......:..:....:.......x..:.xxx...:.:..:.:x..::..x..:..:..:x.:::.:... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 76547056 NA +3136 chr4 + 190214555 159191599 159191598 159191681 83 CGTGGTGGCGCGCAACGATAGTCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:..:.:--x:....:.....:.....::........x.xx.x...x::.........:.:..x.xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 83158402 NA +6138 chr4 + 190214555 159193188 159193187 159193286 99 TCTCTTTTACAGGTTAATGTGTGAAACTGTGAGATATGAGAGACACGAAGCAAATGAAGTTTTATACTAGTAGGTGTTTCCTTTTTGTTTGTACAATGT chr4 + 94230402 23194521 23194520 23194617 23194521 23194520 23194617 97 TCTCTCTTTCAGGCTGATGTGTGAAACTGTTCGATATGAAAGGCATGAAGCAAATGAAGTTCTGTACTAGTAAGTGTTTCTTCTT--TTCATATGATGT .....:..x....:.:..............xx.......:..:..:...............:.:........:.......:.:..--..::..::.... 85M2D12M 79/97 81.4% 97/94230402 0.0% 2/97 2.1% 135998667 54215888 +4013 chr4 + 190214555 159198205 159198204 159198403 199 AATACTGCGATTCTTTCTTTTATTTTCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTCCTTC----CTTCCTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCT chr4 + 94230402 19215360 19215359 19215564 19215360 19215359 19215564 205 AATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCC---CCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCT ....:.x.:x..::x.......x:x.x..:..::.xx:x.::x.xx:.:::.::..:.:::.---..:.:...:...:...xx....-----......x..::...x......xxx....x.x..::::xx:........x.....:.:x.:x.....:----....::..xx:.:...::.x....x:x.::...:x......x... 62M3D22M5I67M4I45M 117/196 59.7% 205/94230402 0.0% 12/196 6.1% 139982845 50231710 +3752 chr4 + 190214555 159198211 159198210 159198409 199 GCGATTCTTTCTTTTATTTTCTTTTCTTT-------------CTTTCTTCCTTTCTTTCTTTCTCTTT-------------CTTTCCTTCTTTCTTTCTTTCTTTCTTTCT--TTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC----TTTTTCTTTCTCTCTCTTTCCTTCCTTC----CTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTTCCTCT chr4 + 94230402 19215327 19215326 19215566 19215327 19215326 19215566 240 GTAAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT .::.x.:...x............x.:xx.-------------.....x..:...xx:x:x.....::.-------------.:::...:.:::.:::....:...:...:.--....-----......x..::...x......xxx....x.x..::----:..:.:...x.:...:..x..x.....:----...:.:..xx:.:...:..x....x:x.::...:x::....x:.... 29M13I26M13I30M2I4M5I35M4I28M4I47M 128/199 64.3% 240/94230402 0.0% 41/199 20.6% 139982884 50231671 +3389 chr4 + 190214555 159198216 159198215 159198331 116 TCTTTCTTTTATTTTCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697126 63697125 63697239 63697126 63697125 63697239 114 TCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTC--TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...:::..:::x.x.:..:.....:....:..x..::.:.x....xx.:.:.x..:.xxx:::..x....:.:x.xx......--...::.:.::..........:....:.x.:. 83M2D31M 70/114 61.4% 114/94230402 0.0% 2/114 1.8% 95501090 NA +3669 chr4 + 190214555 159198218 159198217 159198289 72 TTTCTTTTATTTTCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ........x..x..............:....::.::.x..::.x..:...x.:x..::....x...x..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 90034871 NA +3188 chr4 + 190214555 159198230 159198229 159198334 105 TCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x.::::...........x.:...:::.x..x....:.x:x.:..::x:.xx....x..xx:x.:..:.:x::.:.:...x:.x......x.....:...... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 126302632 63911923 +3035 chr4 + 190214555 159198248 159198247 159198331 84 CTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:.:.:..::.x.::..x....:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 101826222 88388333 +3602 chr4 + 190214555 159198248 159198247 159198370 123 CTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.....:..:.::::....:...:.:.:....x.. 13M1D109M 75/122 61.5% 122/94230402 0.0% 1/122 0.8% 95501131 NA +3886 chr4 + 190214555 159198252 159198251 159198374 123 CTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:....:-......xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx..........:.:.:::...:...:.::....:x.. 13M1D109M 77/122 63.1% 122/94230402 0.0% 1/122 0.8% 95501135 NA +3004 chr4 + 190214555 159198256 159198255 159198340 85 CTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTC chr4 + 94230402 57372026 57372025 57372110 57372026 57372025 57372110 85 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC ....:.....::..x:::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x...:.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 101826230 88388325 +3198 chr4 + 190214555 159198260 159198259 159198341 82 CTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.......:...x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..--..x..... 74M2I8M 56/82 68.3% 84/94230402 0.0% 2/82 2.4% 101826234 88388321 +3280 chr4 + 190214555 159198262 159198261 159198378 117 CTTTCTTTCCTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:.::..:..::-----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:...:x.xx...:.....::...:::...:..:..:::...:x.. 18M5I99M 70/117 59.8% 122/94230402 0.0% 5/117 4.3% 95501145 NA +3046 chr4 + 190214555 159198265 159198264 159198348 84 TCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTC chr4 + 94230402 57372027 57372026 57372110 57372027 57372026 57372110 84 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTC .:....:..::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x.:.... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 101826238 88388317 +3225 chr4 + 190214555 159198265 159198264 159198374 110 TCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTTCTTT chr4 + 94230402 37521415 37521414 37521524 37521415 37521414 37521524 110 TCTCATCTTCTGCATTTATCTGATTCTTTCTTGTCCTTTTATACTTCCCCTCTCCCTCCTATGTGTTATTTTCTTGATTTC-CTTTTTTTCCCCCCCCCCTTTTTTTTTTT ...:x:.....x:x...x.:.xx.........-..:..:.x.x:...:::::.:.:.:..x.x.x.:x..:.:..xx....-..:.:.....::..::.........:... 32M1I48M1D29M 70/109 64.2% 110/94230402 0.0% 2/109 1.8% 121676850 68537705 +3119 chr4 + 190214555 159198331 159198330 159198422 92 TTTCTTTTTCTTTCTCTCTCTTTC-CTTCCTTCCTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTTCCTCTCTTCCTCTCTCTC chr4 + 94230402 84992614 84992613 84992706 84992614 84992613 84992706 93 TTGCCATTTCTTTCCCCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCC ..x.:x........:.:x...xx.-.xxx::...:......:....:..::..:.:.:......:..x..x:...:.....::x..x.x..:. 24M1I68M 60/92 65.2% 93/94230402 0.0% 1/92 1.1% 74205717 NA +3178 chr4 + 190214555 159198922 159198921 159199000 79 ATACAAAAATTAGGCGTGGTGGCATGAGCCTGTAATTCCAGCTACTTGGGAGGCTGAGCCACGAGAATTGCCTGAGCCC chr4 + 94230402 76033183 76033182 76033259 76033183 76033182 76033259 77 ATGAAAGGATGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC ..:x..::..x.x:.:::....--..x:.x....:.............::..........x:.x...x::.:...:... 22M2D55M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 83165739 NA +7260 chr4 + 190214555 159210473 159210472 159210587 115 TCTGATTCTGTTACCTTTTCTTT---TCAGCCCTGATGATATTGGGACCTGCTGGTATATCCTTCTTTCTGGTTCCGTGTTCATCAAGGAATCCATGTTTCTTCCAAGAAGCAGGTAT chr4 + 94230402 23207146 23207145 23207263 23207146 23207145 23207263 118 TCTTACTCTCTGTCCTCTTCTTTATTGCAGCCCTGATGATATTGGTACCTGTTGGTATATCCTGTTGTCTGGCTCAGTCTTCATTAAAGAATCTATGTTTCTTCCAAGAAGCAGGTAT ...x.:...x.xx...:......---x..................x.....:...........x:.x.....:..x..x.....:..:.....:........................ 23M3I92M 97/115 84.3% 118/94230402 0.0% 3/115 2.6% 136003327 54211228 +3002 chr4 + 190214555 159219314 159219313 159219371 58 AATCACTACAAGGGATAGTGTCCCAACTGTATCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 86464139 86464138 86464196 86464139 86464138 86464196 58 AATCATGACCAGGGTTAGTTCTCAAGTCATATGCTTTTTTTCTTTCTTTTTTTTTTTT .....:x..x....x....x::.x.::::...x........:...:............ 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 72755175 NA +3345 chr4 + 190214555 159237879 159237878 159237960 82 ATGGTGGTACGCACCTGTAGTCCCAGCTACTTGGGAGTCTGAGGCAGGAGGGTTGCTTGAGTTCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....--....x......:...........::..x.....x.xx.x.::x::.....:::...:..:.:x:.....:.. 8M2D72M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 83204681 NA +8376 chr4 + 190214555 159238795 159238794 159238924 130 TTCTTTCTTTCTAGTTTTGGCAAGCGTTCTGCAGGAAGTTTTAGGCGTGGCTGTGAATGCATTGTTTTAGAGCCTTCTGAAATGATTGTGGTAAGAGTATTTCTGTGAG--------GACTATTTTTCCCCTAAAAAA chr4 + 94230402 23226250 23226249 23226387 23226250 23226249 23226387 138 TTTTTGTTCTTCAGTTTTGGCAAGCGTTCTGCAGGAAGCTTCAGGCGTGGCTGTGAATGCATTGTTTTAGAGCCATCTGAAATGATTGTGGTAAGAATATTTTCATGCAATTTCTTTAACTTTTTTTTTTTCAGAAAA ..:..x:.:.::..........................:..:................................x.....................:.....:::..x:--------:...x.....:::::.:.... 109M8I21M 107/130 82.3% 138/94230402 0.0% 8/130 6.2% 136012545 54202010 +13588 chr4 + 190214555 159241191 159241190 159241377 187 TTTATTTCAGGTGGACTATATGGATGAAAATGAAGAATATTTTCAGCGGCAAGCTTCCCATAGACAGTCTCGAAGGAGATTTAGAAAAATCAACCAGAAAGGTGAAAGACAAACAATTATTGACACTGTGGATCCTTATCCCATGGGCAAACCTCCTTTGCCTAGAGGCTATCACACGGTAAGTTAT chr4 + 94230402 23228319 23228318 23228505 23228319 23228318 23228505 187 TCTATTATAGGTTGATTATATGGATGAAAATGAAGAATATTTTCAGCGTCAAGCTTCTCACAGGCAATCTCGAAGGAGGTTTAGGAAAATCAACCAAAAAGGGGAGCGACAAACAATTATTGATACTGTTGATCCTTATCCTGTGGGGAAGCCACCTCTGCCTAGAGGCTACCATACGGTAAGCTAT .:....x:....x..:................................x........:..:..:..:...........:.....:...........:.....x..:x................:.....x...........::....x..:..x...:.............:..:........:... 187M 160/187 85.6% 187/94230402 0.0% 0/187 0.0% 136012872 54201683 +11720 chr4 + 190214555 159243655 159243654 159243853 199 GATCATTCTTAACTTAATTTTAACATTATCTTCATTTTGGCAGA-TGTAATATAGCATGTCTGATAATGTTCATCTTTTCCTTTCCTCCTTTATGGCACTCATTTCATTTTGGCTCAAAGGAATGCACTAAATCTCAGGTATTGTAAT---TTGTGTGTGGTCTTCTGACACTAACCTAAGTTTACGTGTGAATTTGCACTGT chr4 + 94230402 23231007 23231006 23231200 23231007 23231006 23231200 194 GACCCTCATTAACATAATTTTAACATTATCTTCATAGTTGTGGAATGTACTATGGCATGTCTGATAATGTTCATCTTTTCCTTTCCTCCTATATGGCATTCATTTCATTTTGGCTCACAGGAATGCACTAAACCTCAGGTATTGTAACTTATTGTGTATGGTC------CACTAAC---GATGTACTTGTGGGTTTGCAGTGT ..:.x.:x.....x.....................xx.x.::..-....x...:....................................x.......:..................x..............:..............:---......:.....------.......---::.x...x....::......x... 44M1I103M3I12M6D7M3D24M 165/190 86.8% 194/94230402 0.0% 13/190 6.8% 136012648 54201907 +11014 chr4 + 190214555 159248803 159248802 159249091 289 GTAAATTCATGCAAGGCAGTTAAGAATGGTATGCAGTGTGCTGTTTACCCAAGTTTCAGCTTCTGTTGAAGGATGTCTATTTTTATATATTACATCATCTCTGCTACAGAACTCCGGTGTCCACTGGGATTTACTGTTCTTTCATTCCATTTTGAAAGAAAGCTTGTATTGATGTCATAATTGGACCCAT-CTTTTGGTTGCACTTGGAAATTGAAAGTAATAAGGGTGTTGTGTAGCAAGTCATGCAATATTTCAAGCGATTTATTTGTCGAAAAGATCACTGTCACTT chr4 + 94230402 23235372 23235371 23235645 23235372 23235371 23235645 274 GCAAACTAATGCAA---AATTAA---TGACATGCAGTGCGTTATTTACTCAACTAGCAGCGTCTGTCAAAGCATGTCTATTTTTGCGTATTACATCATCCCTGCTGAAGAACTCACGTATCCATTGGGATTTACTGTTCTTTCATTCCCTTTAGAAGG---GCTTACACTGATGTTGTAACTGGATTTGTAATTGTGATTGGATTTGGAAATTCA-------AAGAGCAACATACTTCAAGTTATATAGTATTTTATGCAGCTGGGGTGTCAGTAATCTTACCGACAGTT .:...:.x......---.:....---..::........:.:.:.....:...x.xx....x.....::...x............:::............:.....:x.......xx..:....:........................x...x...:.---....::.:......::...:....::::.-x..x..:...x.:.........x.-------...:.::x::.::xx.....:..::.:.....:.x..:::.x:xx....::x..xx.:..:.x..x.. 14M3D6M3D132M3D29M1I24M7D68M 195/273 71.4% 274/94230402 0.0% 17/273 6.2% 136013431 54201124 +81570 chr4 + 190214555 159266659 159266658 159268809 2151 TGGGTGTTTGTG--------AAAATCACATCATCTAAATGTATACAA-AGCTTGTCAAGTATGCATTTTATAAATTTTTGATAGATACTTGTTTACTATAGCACAGCAATA----TTTGAGGATGGGATA----GAGGTCACATTGATTC--CTTTATCTTCACCTTGGTGAAAAAAATCATATTTTAGTTCAAAGCTGTTCAAGTAAGTCCTTGCTCCGTTTTCCCACCCTGTCTTCAGTGATATTATTTGGAGTCAGCAATCAATGGATTCCATCCCTCTGAGACTTGCTTAACCTACAGCTGCTGATAGAATACAGGCAAGAGCTTGTTACTTTATCTGAATTGTCCATTGCTACCTTAATGAGTGAAATGGTTAAGTAGAGGAGGGGGCGAGTCTTAAGGAATGTGTGTACCATTTGAGCTGAATATTTCAGTGTGTATAGGGAGAGGGAGGGTGAGAG------AGAAATCCACTTACATCACTAGAACTGCATTGAGTGTGAGCCTTGCAGGTTAAGAGACAGACTACAGTGTCTT-GCTTTCTGCAGGAAGCAGCAATGCCGTTTGTTTCCTAAGAGGAATTTTTTATTTAGAAAAGGAAGC----TTTCTATCCAGGAAATGGCTTTCCTTGTGCGTTGCTATGCCAACTGCCTGCAGCCATGGTCCTCCAAAGTAAGCACAATAATGTAATTATATTGGTGTATTGCATTCAGACTCATGATTTTTGAGATT---GTGTGTGTGCATGTGCTGTGTTTCTGTTAGTGGCTCTCTTGCTAGCAGGCATGCTTGTGTTGAGTGTGAGGGACAGACATCATTAAATTAAATGTCCATCAGTGTCATGCTGCCAAGATTAATTGTGCAAACTTGGTTAGTGGAGTGGGACAGAGATCACTGGTCACCACTCTGTCAGCATCATTAGCAGCTAGGG-AGGAGTTCCCGATTCACACGCTCTGCCCTGATTTTTTTCTTTCTTTCATTTTCTTTTTTTCTCTTGGTTGGAGGGTT------------CTGTATGTGTGA----------TTGCAGATGAAACAAGGGTATTAACAATGCTTGGCTGAATGCTAGAGCCTGGTTCTTATACCACCCTGACTAATATAATTCTGTGTTAAGCCTTTTTGAGGGGAGTCTGTGTGCAGTCAGCCATTTTAGCTTTTTTCTTTTTTTTTTTTTTTTCCTCTCCTTTTCTTTTGCCTCTTGTTCTTCAATCTCAGA-AATGATCTTGTTCTCTTGGAAGACTGAGAGCTGTGTGAGGTTTTCTCAGTCTTGTCATAGCCTAGGATGGTTAGAGTTTCAATGTTATAAAAATGGAGACGAACACTGTTGTTCGGATTCCTTTTCTGGTCTACAAGTGTGAAGGGTTTTT-AAGCTTACCAGTAGTGACACTTTAAGCTGCAGCTTGGTTTTCCCTCCTCCCTTTTTTTTTTTCCTTTTTCTTTTAATTTAATGCTGTAGAGGGTGACTTGCCATC-GTGAGAGATTGGTACATGATGTGTAAATTCAGTTCAGCATATGTTTCTTCATTATGAAACCACTAGCAATCCCAGCTAACCATGGAGTTATGGGCCAGCAGGAGAAACACTCAGTAAGTATCGCAAATGCTGCTTGTGCT-TTGATAGCACGTCATAGA-GAACTGCTTTAAAATGGGAATTGTTGCTCTTTCTCTTCAGGGAAAACAGTTTTTGTAGAAGGTATAGTAGTCTGCTTGGAGAGGAGGG--------GAGGGTGCATTA-AAGCTG-GCTTGTTCTTCCAATGTTGTAATTT---TTAAAAATTTGAAGCAAGACCAGCAATTTATTTAAAGCAAAATCACTAATACTGAGAAATATTGGGCAGCTAATTTTTATATTTAGAAACTAAAGCTTGACAGTTCAGCTTCGACTTAGTACTTG--AATAGTTTTCAAAAAAATGTTTTTGTAGTTGAATT---TAATGAGAAATCATCAGAAAGGTTATTGAGAACGGGAATCTATAGTGAGGAATTCGCATGTAGGTTTGAGTGTAGGAGGGAGAGCT-TTGGTTATTGATTTGGTAATAAAGCGATCAGTGGGACTCATCTGATTTCTTAACATGTATTCATCACTTATGGAAACACAGCTTTTTTTAATGCCACAAAAAATTATTGCTTCTTTATAATTGATCCCATGAGTCAGCTATGTGTTTGTCATGCTGAAATCCCATGGGCAGC chr4 + 94230402 23243084 23243083 23245185 23243084 23243083 23245185 2102 TGGATGTCTGTGGCCTGCCTAACAGCAAAACAGCTGAAAATCTGCAAGAACTTGTCAAGTGCACTGTTTATAAATACTTGATAACAGC--ATTTACAGTTCTGCAGCAGCACTCTTTTGGGTGGGGGAAAAAGGGAGGTGATGTCAAACCTGCTTTGCCTTCATCTTCCTGAGAAGTCCCGC---TTGGTGCAGGGCTGGTGGAGGTACATGCTGGTCCTTAAACTGGCAGCGCCCTC-------------GGGAGCAGCCGTGAGCACATCCC-TCCCCTTGGGGTCGCCTTCATCTTCAGGGGCTGACATCATTCAGGCAAGAGCTGCTTGTTTTCTCTGCGTTGTCCACCTCTACCTTAATGAGTGAAATGGTTAAGTGTTGGAGGGGACGAGCCTCAAGGAATGTGTCTTCCATTTGACTCAAATATTTCCGTGGATAAAGGGAGAGGGAGGGAGAGAGCGAGTGAGAAATGCACTTACATCACTAGGACCGCACTGAGTGTGC-CTTTGCAGGTTAAGAGACAGACTACAGTCTCTTTGCTTTCTGCAGGAAGCAGCAATGCCGTTTGTATCCTAAGAGGAATTTTTTATTTAGAAAAGGAAGCATTCTTTCTGCCCAGGAAATGGCTTTCCTTGTGCGTTGCTATGCCAACTGCCTGCAGCCATGGTCTTCCAAAGTAAGCACAATAACGTAATTATATTGGCGTATTGCATTCAGACTCATGATTCTCTGGGTTTTTGTGTGTGTTACTGTGTTGTATTTCTGTTGCTGACTCTCCTGCTGGTAGATGTGCTCGTCTGGATTGTGAGGAACGGGCATCATAAAATCCAATGTCCGTCAATGTCACGCTGCCGAGATTAATTGTGCAAACTTGGTTAGCTGAGCGGCGCATGGATCACCGGTCACTACT--GCCGGTAGCGCTGGCAGCCGGGGGAGGAGGTCCCTGCTCGCGTGCTCTGCCCTGATTTTGGG--------------------------GGAGTGGAGGGTGGTGGCGGGGGGGCTGTGTGTGTGAGCGTGTGCGGTTGCAAATGAAACAGGAGTATTAACAATGCTTGGCTGGGTGCTGGGGC-TGGTTCCTG---CACCCTGACTAACATAATACTCTATTAAGCCTTTTTGAGGG-AGTCTCTGTGCAGTCAGCCATTTTAGCttttttcctcctttttttttt-----ctttttttttttttCCCCCCATTCCTCTGTCTCGGGGAATGGTTTTGTTCCCCCGGATGAGCACTAGATATGTAGGGTTTCATTAGGCTCTTTGCATCCTGACATGGTTAGACTTTCTGTGTTACAAAAATGGAGACTAACGCTGTCGTTTGGATTGCTTCTCTGCACTACAAGTGTGAGGGGTTTTTTGAGCTTACCCGTAGTGACACTTTTAGTTCCAGCTTGCTTTCCCCCC---------------TCCTCCTCGTTTTAATTTAATGCTGTAGAGGGTGACTTGCCATCCATAAGAAATTGGTACATGATGTGTAAATTCAGTTCAGCTTCTGTTTCTTCATTATGAAACCACTTGCAATCCCAGCTAACCATGGAGTTATGGGCCAGCAGGAGAAACATTCAGTAAGTATTGCAAATTCTGTTTGTTCTATCAATAACCTGTCACAGGCGAGCTGCATGGAGATTGGAACTGCTTGTCGTCTTCCTTGCGTACTTCTCCTGATTTGGGAATT-TAATAGCGGGTTTTTCAGGGAAAGCTGTACCTGAGGTGGCATTAGAATCTGTGTCTGTGCTT--AAGGTTGTTTTTTAGCTTGGAAA----AGACAACTCTGTCGGATTTTTGAAGGTTAGAAGTGTACT--CGGAAAATATTG---ACATACTTTTTGTGGTCA-----TGAAGCTATTCAGTTAAAAT--GACTATGTATTTGTTAAAAACTTTAAAGGG---------GTATTTGAGTTTTGTAACGTGATTTAATTGTAGCCGATGATAAGAATAG--ATTTATTCTGTGTAATGTGT-----GGTATGGGTGT----------GCTGTTGCCTTGTAACATGGCATTGAA--CATCTGTGGTAGTCTTGCA----CTGAAAATGCAGAAACTG-TTAGTAAAACACGGCATGAACAAAAGGCATAAG----TACTGATGCTTTATAATTGATCCCATGAGTCAGCTACACCTTTGTCAGGCTTTAATCCCATGGGCTGC ...:...:....--------..x.x..x.x..x..:..x:.x.:...-.:..........:::.xx.........x:......:xx:.--:.....x:.xx::.....::.----....:.x:x....x.----.....x.::.::.x:.--....::.....:...xx...:..:xx:.::---..:..x..::....x.x:..xx.xx:x:..x...x.xxx.:x:.xx:.:.:..-------------..::x....x:.x.:::x..:..-....::..:.:::xx...x.:..x...xx.....:.xx..x............xx..::...x....x:.......::x...........................:xx.......:....:..:...........x.x........x:::........x...x:..x..............x.....------......x...............:..:...:........x-.:..........................x....-...............................x..................................----.....::......................................................:...................:.............:.......................:.:x:.:..---........xxx....:...:........:x..:.....:....:.:..:::....:..x.x..x.......:..:.:......x....:x.......:...:.....:......:.........................:x...:..x:..x:......:......:...--.:.:.:.x.::.:.....::...-.....x....x::..:.::................xxx--------------------------x.:x........x------------....:.......----------.....:........:.:....................::....:.:..-......:.:---............:.....x..x.:.................-.....x............................:.::..........-----..::....:....x..:.:::...:..x:....:.:-....:.:......:.::...x..x::xx..x.:...::.....:x.:..x..:x.:::.x...::x.........x....x:.....:............x...:....:...:.....x...:....xx............:........-:........x.............x..:.x.......x...:...:.---------------....::.:x...................................-:.:...:...............................x.x.......................x............................................:...........:......x...:....x..-.::...:.x:....:..:-..:....x.x:.:..x....:..:.xx..x.::..:.::x.x.xxx.xx:.xx.x.:.:.:x.-..:...:xx.:..xxx::...::.--------....xx......-..x...-.::...x...--..x.....xx...---..::...----.::...xx.::x.::x..x..x..:.:x.:.xxxx..x.--:.::........---.xx..x.....:.:x.:.-----.:.....xxx.....x.:x.--....xx...:...--..x.::...x..:::---------...x....:..---...:.x..xx.x..::x.:xx.x.:x.:....::.--..:...xx..x.x...x:.:-----...x..:....----------...-...x:.xx.:.:x...:.x.:..--x...x....x.x..x.x::----..x..x...:.xxx.:::-...xx:......:..x.xxx:x..x.x..:..:----..:..x.x............................:::x.......x...xx............x.. 12M8I27M1I40M2D21M4I15M4I16M2I30M3D53M13D23M1D188M6I39M1D33M1I66M4I128M3I171M2D23M1I38M26D13M12I12M10I48M1D9M3D41M1D48M5D36M1I151M1I46M15D44M1I140M1I18M1I63M1D24M8I12M1I6M1I10M2D13M3I7M4D39M2D12M3D18M5D20M2D13M2I15M9D11M3I35M2D20M5D11M10D3M1I23M2D19M4D18M1D33M4D68M 1520/2022 75.2% 2102/94230402 0.0% 209/2022 10.3% 136023575 54190980 +3045 chr4 + 190214555 159274412 159274411 159274470 59 TTTTGAAAAATATTTTAAAAATAAAACGAATGTCTAAATATATCTACATAGAGATATAA chr4 + 94230402 37727997 37727996 37728055 37727997 37727996 37728055 59 TTGTGAAAGATATTTTAAAGATAAAACTAATGTAAGAATACATAATCAAAGAGAAATAA ..x.....:..........:.......x.....xx:....:..xxx..x.....x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 121546415 68668140 +3589 chr4 + 190214555 159284913 159284912 159284994 82 CGTGGTGGAGCATGCCTGTGGTTCCAGCTACTTGAGAGACTGAAGTAGGAGGATCACTTGAGCCCAGGAGGTTGAGACTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:::....x...:.--...:...............:..:....:x:xx.x.:.x.......:.....:..x..x:.:...:. 14M2D66M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 83251716 NA +3211 chr4 + 190214555 159295723 159295722 159295782 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCATGCACAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............::........xx...:.:.:.:::.:..:.:..:.:....x:..:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 80030204 NA +5511 chr4 + 190214555 159302339 159302338 159302491 153 TTTTTTTAAAAAATCACACTATGTTG--CATGTCAACCTGAGTCATGTCTGTAAAAGATAATCAATAGAAATCAGTTTATTGTTCTCTAATTACATGTATTGATTGATGCCTTTTAACATCTCTAAGCCATAGAGTAA-TGTTTCCCCAGTTGCCT chr4 + 94230402 23260312 23260311 23260465 23260312 23260311 23260465 154 ttttttttGAGTTTAACTCTGTGCTGGACATGTCAACTTGCATCATGTCCTTAGGC-AGAATCAATAGAAGTTACTTTATTATTCTGTAATTACTTACATTGACTGCTGTGTTTTAA-ATTACTGAACCATAAAAAAATTGTTTTCCTTGATGTCT .......x:.:xx.x..x..:..:..--.........:..x:.......:x..::x-.x...........:.:.x......:....x.......x.::.....:..x..:x......-..:x..:.:.....:.:x..-.....:..:x.x..:.. 26M2I28M1D60M1D20M1I17M 109/151 72.2% 154/94230402 0.0% 5/151 3.3% 136042027 54172528 +13650 chr4 + 190214555 159304235 159304234 159304479 245 TTTTTAGTTCAAT-------GGTATAGAATAAAATATGATATTTTAATTTTAAAATGTCTTCTTGGAGTTCTTGATTCAGATTGTAATCCTAGTTTTTCCTGCTCCTTCCATAGCTTCCTGCAGATTTCACAAAACTGCATCTTACTGACAGTCTCCACCCACAGGTGACCCACGTTTCTTCTAGCCATTCAGGATGTAGTATCACTAGTGATTCTGGGAGCAGCAGTCTTTCTGATATCTACCAGGTAAGA chr4 + 94230402 23265801 23265800 23266051 23265801 23265800 23266051 251 TTCTTAGTACAGTTGGTGCTAGCAGAGAGTAAAGCATGACATAAATGATTTAAATTCATTTTTCTATGTATCTCTGTCAAATTGTAATGAT-GCTTTTTCTGCTCCACCTGTAGCTTCCTGCAGATTTCACAAAGCTGCACCTTACTGACAGTCTCCACCCACAGGTGACCCACGTTTCATCCAGTCACTCAGGATGTAGCATCACAAGTGATTCGGGAAGCAGCAGCCTTTCTGATATCTACCAGGTAAGA ..:.....x..:.-------:.:.x...:....::....:..xxxx:x......x.xx:..:.:x:x..x::.xxx...:........xx.-.:....:.......x:.::.......................:.....:......................................x..:..:..:...........:.....x........x..:........:........................ 13M7I71M1D160M 193/244 79.1% 251/94230402 0.0% 8/244 3.3% 136038434 54176121 +3569 chr4 + 190214555 159313012 159313011 159313090 79 GTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCATGAGAATCGCATGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:.........:.::........x.x..x...x.:.x......::.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 83279811 NA +14272 chr4 + 190214555 159314568 159314567 159314773 206 AATTTTTGTGTGTGTGTCTTAAGGCCACAGAAAGCGAGGCTGGTGATATGGACCTGAGTGGGTTGCCAGAAACAGCAGTGGATTCCGAAGACGACGACGATGAAGAAGACATTGAGAGAGCATCAGATCCTCTGATGAGCAGGGACATTGTGAGAGACTGCCTAGAGAAGGACCCAATTGACCGGACAGATGATGACATTGGTAAG chr4 + 94230402 23272392 23272391 23272595 23272392 23272391 23272595 204 AATGTTTATGCTTGAATTT--AGGCTACAGAAAGTGAGGCTGGTGATATGGATCTCAGTGGGTTGCCAGAGACAGCAGTGGATTCTGAGGATGATGATGATGAAGAAGACATTGAAAGGGCATCAGATCCTTTGATGAGTAGAGATATTGTCAGAGATTGCTTGGAGAAAGATCCAATAGACAGGACGGATGATGACATTGGTAAG ...x...:..:x..x:.:.--....:........:.................:..x..............:..............:..:..:..:..:.................:..:............:.......:..:..:.....x.....:...:.:.....:..:.....x...x....:.................. 19M2D185M 172/204 84.3% 204/94230402 0.0% 2/204 1.0% 136042176 54172379 +11549 chr4 + 190214555 159322183 159322182 159322499 317 TGTACCTGCAAGAAATTCAGCTGGTGCTAAAGATACTTGATATGTATTTTTCAATAAGCAAAA----TTGTAGGGCATTTAAAAAGAAAGGACCCTAAAACATTCTTTTTGAATACTTGTTTTTAATAAAAGTAGTAGTTTTTACA---------AAGTATGTCTTTTGCTTTTCAGAACAACTCTTGGAATTTATGCACCAGTTGCCTGCTTTTGCCAATATGACAATGTCAGTGAGGCGAGAACTCTGTGCTGTGATGGTGTTCGCAGTGGTGGAAAGAGCAGGGACCATAGTGTTAAATGATGGTGAAGAGGTGAGTAACTATTCCT chr4 + 94230402 23274166 23274165 23274490 23274166 23274165 23274490 325 TATGCCTACAAAATACTCAGTAATTACAACAGGCCACTGTGTAGGATTTATTAGTATACAGAAACGATTGTGCAGCATTTTAGCTTAA-GTAGCCTTAGGCAT-CTTTCTGAAGAACCGTCTTCGCTGTGCTTTGT---TTTGACATGCATAACTCAGTGGGCTTTTTCTCCTTCAGAACAACTACTGGAATTCATGCATCAGTTGCCTGCTTTTGCCAACATGACAATGTCAGTGAGGAGAGAGCTTTGTGCTGTAATGGTGTTTGCAGTTGTGGAGAGAGCAGGAACTATTGTACTGAACGATGGGGAAGAGGTCAGTGGACGTTACT .:.:...:...:.x.:....:x:x.:.x.x..::xx:..xxxx.x....x.:.:..x:..:..----....:x:......x.:xxx..-.x.x...x.::...-....:....x.x::..:..::x.:x:xx.x..---...x...---------x...:x.::....x:::............x:.......:.....:....................:..................x....:..:........:........:.....x.....:........:..:..x..::.:..:.....x........x...::x::..x.. 63M4I21M1D14M1D32M3D7M9I175M 218/312 69.9% 325/94230402 0.0% 18/312 5.8% 136048017 54166538 +12716 chr4 + 190214555 159323456 159323455 159323629 174 TAGCTGGACTCCTGGTCAGTGATTCTCAATGGATCTGTGGAAGTGACTTATCCAGATGGAAAAGCAGAAATACTGTGCATGGGAAATAGTTTTGGTGTCTCTCCTACCATGGACAAAGAATACATGAAAGGAGTGATGAGAACAAAGGTGGATGACTGCCAGGTATAAAATATA chr4 + 94230402 23274909 23274908 23275082 23274909 23274908 23275082 174 TAGCTGGATTCCTGGTCAGTCATTCTGAATGGCTCTGTGGAAGTGACATATCCTGATGGAAGAACAGAGATACTGTGCATGGGAAACAGTTTTGGAGTTTCCCCTACCATGGAAAAGGAATATATGAAGGGAGTGATGAGAACCAAAGTGGATGACTGCCAGGTAGAGTGTATA ........:...........x.....x.....x..............x.....x.......:.:....:.................:........x..:..:...........x..:.....:.....:..............x..:..................x.:x:.... 174M 151/174 86.8% 174/94230402 0.0% 0/174 0.0% 136048547 54166008 +12586 chr4 + 190214555 159329809 159329808 159330016 208 TCTTTTGCAAGCACTTTATCATTAA---CATGTGACTTATGTTTTATTCCAGTTTGTCTGCATAGCCCAGCAAGATTACTGCCGTATTCTCAATCAAGTAGAAAAGAACATGCAAAAAGTTGAAGAGGAAGGAGAGATTGTTATGGTGAAAGAACACCGAGAACTTGATCGAACTGGAACAAGAAAGGGACACATTGTCATCAAGGTAGGA chr4 + 94230402 23276697 23276696 23276906 23276697 23276696 23276906 210 TTTTTTTTGAG-ACTTTACCTTTTAATACTGGTGCGTGATGATTCTTTCCAGTTTGTTTGTATAGCTCAGCAAGATTATTGCCGCATCCTCAATCAAGTGGAAAAAAACATGCAGAAGGTAGAAGAGGAAGGAGAGATTGTGATGGTTAAGGAGCACAGAGAGCTTGATCGCACTGGAACAAGAAAAGGTCACATTGTCATCAAGGTAAAA .:....x::..-......:.x..x.---.xx...xx.x...x..:x...........:..:.....:...........:.....:..:...........:.....:........:..:..x....................x.....x..:..:...x....:........x..............:..x..................::. 11M1D13M3I183M 170/207 82.1% 210/94230402 0.0% 4/207 1.9% 136053112 54161443 +3038 chr4 + 190214555 159330244 159330243 159330305 62 TATGTGTGTGTGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATG chr4 + 94230402 27325496 27325495 27325557 27325496 27325495 27325557 62 TATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ....xx...:.::.:x..x.:x.:x:.:...........:.........::...:....... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 132004748 58209807 +3069 chr4 + 190214555 159330256 159330255 159330315 60 TATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTAGTAATTAA chr4 + 94230402 65759986 65759985 65760045 65759986 65759985 65760045 60 TAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAA ..x..x.:.:x..:...:........::.:::...x........:.......x..x.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 93570270 NA +14187 chr4 + 190214555 159330297 159330296 159330562 266 ATATATATGTAGTAATTAAACCTTTTCTTTGTTACAGGGTACCTCAGAAAGGTTAACAATGCATTTGGTGGAAGAGCATTCAGTAGTAGATCCAACATTCATAGAAGACTTTCTGTTGACCTATAGGACTTTTCTTTCTAGCCCAATGGAAGTGGGCAAAAAGTTATTGGAGTGGTTTAATGACCCGAGCCTCAGGGATAAGGTTG---------GAAATATATTCTATTTTGTCTCTTAAATATGAAATGTAAACC---------TAAAGATACTTTAATGTG chr4 + 94230402 23278216 23278215 23278497 23278216 23278215 23278497 282 atatat-tttaataattaaGGTTTAATTTCTCTATAGGGAACAGCGGAAAGGTTAACAATGCATTTGGTGGAAGAACACTCTGTGGTAGACCCAACATTTATAGAAGACTTCCTGTTGACGTATCGGACCTTTCTTTCCAGCCCAATGGAAGTGGGGAAAAAGTTGTTGGAGTGGTTCAATGACCCCAGCCTCAGGGATAAGGTTAAAATCCCCTGAAATTTA-CATACCTTTTATCATAGACATGAAAAAATAAGCTATTAGTGATAAAAATATTTTTGTGTG ......-.x..:.......:x:..xx:..:x:..:....x..xx.:.............................:..:..x..:.....:........:...........:........x...x....:........:.................x........:...........:........x..................:---------.....x..-:x..::..x.x..x..:.:......x:xx..x.---------....:...:...x:.... 6M1D199M9I8M1D33M9I18M 213/264 80.7% 282/94230402 0.0% 20/264 7.6% 136052081 54162474 +34285 chr4 + 190214555 159331413 159331412 159332084 672 AAATAATTGACTTTTCAGGTTACACGGGTAGTATTATTGTGGGTAAATAATCACTTCAATGACTTTGAAGGAGATCCTGCAATGACTCGATTTTTAGAAGAATTTGAAAACAATCTGGAAAGAGAGGTAATATTTGTGGTTTTTTTTAAGATCAGCTTAAAGT----------------TCATTTTATTCAGCCTGTTCTTGAGTTGACACTACTGTTTCTGAACTCTTAAAGAAAATGGGTGGACACCTAAGGCTGTTGAATATCGCGTGTGCTGCTAAAGCAAAAAGAAGATTGATGACGTTAACAAAACCATCCCGAGAAGCTCCTTTGCCTTTTATCTTACTTGGAGGCTCTGAGAAGGGATTTGGAATCTTTGTTGACAGTGTAGATTCAGGTAGCAAAGCAACTGAAGCAGGCTTGAAACGGGGGGATCAGGTATGCCATTTCTAAACTCATTTAAGGGTGAATTTTGGTGTCTGGTTTTTTTTTTCAGTCAATTTTGATACATT------------TTATAATTTC-----ATTTTTAGATATTAGAAGTAAATGGCCAAAACTTTGAAAACATTCAGCTGTCAAAAGCTATGGAAATTCTTAGAAATAACACACATTTATCTATCACTGTGAAAACCAATTTATTTGGTAAGTATTTTGCATACTTTTCATTTTTCTCCTTTTGGCCTTGTTTTTTA chr4 + 94230402 23280958 23280957 23281618 23280958 23280957 23281618 661 AATTAATTAA-TTTTCAGGTTACACGGGTAGTATTGTTGTGGGTGAACAATCACTTCAATGATTTTGAAGGAGATCCTGCTATGACTCGATTTCTGGAAGAATTTGAGAACAATTTGGAGAGGGAGGTAAGA-----AGTTTTTTTTCTGA-CAGTTGAAGATAGCAAGGAATAGGCTGTTATTATATGTAACTCATTGT-------GCTCTTCTTTTTTTGTA--------GAAAATGGGTGGACATTTGAGGCTGTTAAATATTGCTTGCGCCGCTAAAGCAAAAAGAAGATTGATAACCTTAACAAAGCCATCTCGAGAAGCCCCTTTGCCTTTTATCTTGCTGGGAGGGTCAGAAAAGGGATTTGGGATCTTTGTTGATAGCGTAGATTTTGGTAGTAAAGCTACAGAAGCAGGCTTGAAACGTGGAGACCAGGTATG-------------TATTTTAAGATG-----TGGGGTTTTTTTTCCTTTTTCTCCTCCATTCTCTGCATTAAATGAAAATAATGCTAATTTCTTTGTATTTTTAGATATTGGAAGTGAATGGTCAAAACTTCGAAAATGTTCAGCTGTCAAAAGCCATGGAAATCCTTAGAAATAACACTCATCTGTCTATCACTGTGAAAACCAATTTATTTGGTAAG---TTTGCATGCACTTT-TTGTTCTAATTTAGGTGGTGTTTTTCA ..x.....:.-........................:........:..:..............:.................x............:.:...........:......:....:..:.......x.-----:.........xx..-...:.x..::.----------------.:...x...x:.:.:::..x.-------:.x..x..x...:..x.--------...............::.:........:.....:..x..:..:.......................:..x........:.....:........:.................:..x.....x..x..:...........:...........:..:.......:x.....:.....x..x.................x..:..:........-------------:....x.:.:..-----...x..:.xx...::......xx::xxx..:xx.:....------------.xx.......-----.............:.....:.....:........:.....::................:........:..............x...:.:.................................---.......:.x:..:-..x....xx...x..:xx.......:. 10M1D121M5D14M1D11M16I21M7D17M8D210M13D12M5D39M12I10M5I122M3D14M1D27M 517/628 82.3% 661/94230402 0.0% 77/628 12.3% 136050455 54164100 +18507 chr4 + 190214555 159332430 159332429 159332727 298 TTCTGTTTTCATTTATTTT---------AGTATTTAAAGAACTTCTAACAAGATTGTCAGAAGAGAAAAGAAATGGTGCCCCCCACCTTCCTAAAATTGGTGACATTAAAAAGGCCAGTCGCTACTCCATTCCAGATCTTGCTGTAGATGTAGAACAGGTGATAGGACTTGAAAAAGTGAACAAAAAAAGTAAAGCCAACACTGTGGGAGGAAGGAACAAGCTGAAAAAGATACTCGACAAGACTCGGATCAGTATCTTGCCACAGAAACCATACAAGTAAGCATCTGCATATGTCTTCTGTGCATT chr4 + 94230402 23284519 23284518 23284823 23284519 23284518 23284823 305 TTCTTCTTTCATTCCTTTTGTCTTGTACAGTTTTTAAAGAACTTTTAACACGGTTGTCAGAGGAAAAACGAAATGGTGCTCCTCACTTGCCTAAAATTGGTGATATTAAAAAAGCGAGCCGTTATTCCATCCCAGATCTGGCTGTTGATGTGGAACAGGTAATAGGATTAGAAAAAGTAAATAAGAAAAGTAAAGCCAACACAGTTGGGGGAAGAAATAAGTTAAAGAAGATACTTGACAAGACTCGAATCAGCATTCTGCCTCAGAAACCATACAAGTGAGTTTTTG--GATTTCTTCTAAGTATT ....x:.......:x....---------...x............:.....x.:........:..:...x..........:..:...:.x..............:........:..x..:..:..:.....:........x.....x.....:........:......:.x........:..:..:.................x..x..:.....:..:...:.:..:........:...........:.....:..::....x................:..:x.:..--x..x......:x.:... 19M9I260M2D17M 242/296 81.8% 305/94230402 0.0% 11/296 3.7% 136047911 54166644 +12789 chr4 + 190214555 159338294 159338293 159338518 225 TTTTCCTCTTTGTTCAGTGATATTGGGATTGGTCAGTCTCAAGATGACAGCATAGTAGGATTAAGGCAGACAAAGCACATCCCAACTGCATTGCCTGTCAGTGGAACCTTATCATCCAGTAATCCTGATTTATTGCAGTCACATCATCGCATTTTAGACTTCAGTGCTACTCCTGGTGAGTATCACCAACACTTCTTTTGTTTTCT------TATAGTTATCTTTTTATTT chr4 + 94230402 23289042 23289041 23289265 23289042 23289041 23289265 224 TTTCTTTCTGGATGCAGTGACATTGGAATTGGCCAGTCTCAGGATGACAGCATTGTAGGACTGAGGCAAACAAAGCACATTCCTCCTGCTTTACCTGTCAGTGGAACCCTGTCATCCAGTAATCCTGATCTACTGCAGTCTCATCACCGTATCTTGGACTTCAATACAACTCCAGGTAAGGATC-------TTTTTTTTGTTCTCCACtttatatatatattttttaattt ...:::...xx:.x......:.....:.....:........:...........x......:.:.....:...........:..xx....x..:...............:.:..................:..:.......x.....:..:..:..:.......:.:.x.....x...:..x...-------:..:.......:..:------....xx...:....x.... 184M7D15M6I19M 175/218 80.3% 224/94230402 0.0% 13/218 6.0% 136049252 54165303 +18371 chr4 + 190214555 159339013 159339012 159339356 344 TTGCTTTTTCTTAAGGAGCTTTT-TTCTGATTACTTTGCTTAATTGCATTGCCATATATTAAAATTCTTTCTACTTATGTGTGTGATTTTTCTTTCCCCCAGACTTGCCAGATCAAGTGCTAAGGGTTTTTAAGGCTGATCAGCAAAGCCGCTACATCATGATCAGTAAGGACACTACAGCAAAGGAAGTGGTCATTCAGGCTATCAGGGAGTTTGCTGTTACTGCCACCCCGGATCAATATTCACTATGTGAGGTCTCTGTCACACCTGAGGGAGTAATCAAACAAAGAAGACTTCCAGATCAGCTTTCCAAACTTGCAGACAGAATACAACTGAGTGGAAGGT chr4 + 94230402 23293262 23293261 23293578 23293262 23293261 23293578 317 TTGCTTGTTCTTATGCTGTTTTTATTTTCCCTGCATTACTGAACTGTA----CATCT--------------------TGCATGCAACTTTTTTT----CCAGACTTACCAGATCAAGTTCTGAGGGTTTTCAAGGCAGATCAGCAAAGTCGCTACATCATGATCAGTAAGGACACAACAGCAAAAGAGGTGGTCATCCAGGCCATCAGGGAATTTGCTCTCACTGCAACTCCTGATGCGTATTCACTGTGTGAAGTCTCTGTCACACCTGAGGGTGTAATTAAACAAAGGAGGCTTCCTGATCAGTTATCCAAGCTTGCTGACAGGATACAGCTAAGTGGCAGGT ......x......x.xx.:....-..:.xx:.:.x..:..x..:..:.----...x.--------------------..::..::.:....:..----........:...........x..:........:.....x...........:..........................x........:..:........:.....:........:......x.:.....x..:..x...xx:........:.....:....................x.....:........:..:.....x......:.x.....:.....x.....:.....:..:.....x.... 23M1I24M4D5M20D17M4D247M 259/316 82.0% 317/94230402 0.0% 29/316 9.2% 136045751 54168804 +28485 chr4 + 190214555 159341549 159341548 159341950 402 TTCTGTTTTTCATAGGTATTATCTGAAAAACAACATGGAAACAGAAACTCTTTGTTCAGATGAAGATGCTCAGGAGTTGTTGAGAGAGAGTCAAATTTCCCTCCTTCAGCTCAGCACTGTGGAAGTTGCAACACAGCTCTCTATGCGAAATTTTGAACTCTTTCGCAACATTGAACCTACTGAATATATAGATGATTTATTTAAACTCAGATCAAAAACCAGCTGTGCCAACCTGAAGAGATTTGAAGAAGTCATTAACCAGGAAACATTTTGGGTAGCATCTGAAATTCTCAGAGAAACAAACCAGCTGAAGAGGATGAAGATCATTAAGCATTTCATCAAGATAGCACTGCACTGTAGGGAATGCAAGAATTTTAACTCAATGTTTGCAATCATCAGGTA chr4 + 94230402 23293768 23293767 23294168 23293768 23293767 23294168 401 TTTTGTTTTT-ACAGGTATTACCTGAAGAACAACATGGAAACAGAAACTCTTTGTTCAGATGAAGATGCTCAGGAGTTACTAAGAGAGAGTCAAATTTCCCTACTACAGCTCAGTACCGTTGAAGTGGCTACCCAGCTCTCCATGAGAAATTTTGAGCTATTCCGTAATATTGAACCCACAGAATACATAGATGACTTGTTTAAACTCAAATCAAAAACAGGCTGCACTAATCTAAAGAGGTTCGAAGAAGTGATAAATCAAGAAACATTCTGGGTAGCTTCGGAGATTCTAAGAGAAACCAACCAGTTGAAAAGGATGAAAATCATCAAGCATTTCATTAAGATAGCGCTACACTGCAGAGAATGCAAGAATTTCAACTCAATGTTTGCTATCATTAGGTA ..:.......-.:........:.....:..................................................::.:....................x..x........:..:..x.....x..x..x........:...x..........:..x..:..:..:........:..x.....:........:..:..........:.........x:....::.:..:..:.....:..:........x..x..:..:........:........x..x..:.....x........x......:....:........:.....:...........:........:..:.....:..:..............:..............x.....:..... 10M1D391M 342/401 85.3% 401/94230402 0.0% 1/401 0.2% 136047781 54166774 +50480 chr4 + 190214555 159342933 159342932 159345417 2485 CTATTTTACTTTAG-TTGTTATACCATGTTTCTTTTTCTCCTCTCAGTGGCCTAAACCTGGCACCAGTGGCAAGACTGCGAACGACCTGGGAGAAACTTCCCAATAAATACGAAAAACTATTTCAAGATCTCCAAGACCTGTTTGATCCTTCCAGAAACATGGCAAAATATCGTAATGTTCTCAATAGTCAAAATCTACAACCTCCCATAATCCCTCTATTCCCAGTTATCAAAAAGGATCTCACCTTCCTTCACGAAGGTAAACATAAGGCAGAGGGTTTCCATCTTT---------------GCTTGAAGAAGCACAGAATAAATGCCATGTGATTTCCTTTTCCTCCTCTGTCAATTTCAGGAAATGACTCAAAAGTAGACGGGCTGGTCAATTTTGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTGGCCGAATGGCTTCAGTGAACATGGACCCTGCCCTCATGTTCAGGACTCGGTGAGTATGTCATCTTCAG--TGGCACGTGTGAGAGTAGAGAAGGTTAAATTTAGAGCTTCCCAATAAATGATTTTTTTAAAGTTTGAGTATTTATATTTGTAGTACGGCAGAAATTATAGT------------AGGATGTGCTGAGAATCACCT--GTGAGCTCTAA-----------------------TTTGGAATAAATGTCTTATTCT---------------------------GTATAAAGTGTTCTTTCGGCTGTCAGTAA-------AAACAGT---TTGTCTTTCAGACAT-------------------------------------------TTTCAATGTA-------ATAGACACAATTATGTGTTTCTTATTTCTCAGAACACTGACTTGTAGAGCTAAAACTCATAGCTAG----------------------------TAGTATGCACTAAA-----ATATGTAAATACCCCAAATAGTCTTGTCTCAATATCCACACAACAA-ATTTAGCTAGCAGTGTAGTAAAAAGTGATTAATTCAGTGAAAGAGAGAAAAG-------TCAGTCTTAATTCTAGAACAAAAAATTTAAATGTATGTGTCTTTTAAGCCAGAAAAATATTTCTAGTAAAGTTGCGTGTGTGAGGTGATTATGCAGTTTAATGTTTGTGGGCTTCTAGAA-CTGCTTATCCAGAAGTCTAGTCCTTT-CTTTCTGAGCTTGTGATCTTTCTGTCTCTCTTTCTACACCCATGCTTCAATCTCCATGGCTCTCACTTACAGGAAGAAGAAATGGCGGAGTTTGGGGTAAGTGGTGG-AGACCTTGCATACCCACACACAGTTCTTATTCTGCTCATTGCATTGTTTTCTTACCTGCTGT-----ATTTTCTGATGCTTTGCATTTTTGCATTTTTTTCCTTAACCCT-------CGTGCTGTAGCAGA----ATTTCAGATGGCAAATTGACTTCAAGTTTAATCTGTTGGGGCTTTTGCTTTTGAAGTCATGATCCATGAGAGCTGTGAAATGATTGA-TGATTGTTCTGGGGAACTACAG--GCCAGTTTTTCTGAGCTCTTAGAAAAATTTTATTTTCATATAATTGGTGTGTCTCGAAATGCAGAAAGCTCAAAGTAGGGGGAGGGGAGGAAGGATATTAGAAGGG----AAAAGTTGTGCAATTAAAATATTTCACAGATATGTGAGAAATAAATAT----ATTTAATATAAAATAGGTGCCCCCAGGTGTTAAACCCAAATTTTTTACAGCTCAACTAACTACTATTTTCATTCTGTA--TAAACCAATCCTTTTTAAAAATAATTCTTAACAATTCATGTGC--TCAATGGTTTCCATACATATATGTTTACATT------TGCATGATTGTTTTATTAACA-GATTGACCGTATTACTTTA-AAAACTCACCACATTCAACTCAAGGCATAAGAAGACAATTTTGAACATTGTAGCTAATTTTATTTAAATTTATGTATAATATCCTCTTTAGGA-----GAAGTAATTTTAA-----------TGTTGCAAATCTTAATG-----ATTATAGCTGT-----------------GTATTCTTGCATGAGCTTTTACATGTAAT----TATTGTTTTC------TGGCACCTGTGAGAGAACTGCCTTAAATGCTCTA--TAGAGTGAAAAGTAGAATTTCCTAGTTGGAACTGAACAGGTGCCAAACATAAATTTTTATATGTA-------TATTATGTGTAATTTTCTTTAAA--TTTTTAAAATCTGTATTATTCTATATTCCTGTGTAACAG----TTTACTCACTGGAATGAGGCATGTGACCTTTTGAACATAGACT---ATTAATATCAGTCTTGGCACATTTTAAATAGATAAAGTACTCCCATGCTAGAGTGAGCTGCATATGTACCTTTTCATCT------------TCCAGGTCTCTCAGCCAGGGTAGTACAAATGCAACAGTGCTAGATGTTGCTCAGACAGGTGGTCATAAAAAGCGGGTACGTCGTAGTTCCTTTCTCAATGCCAAAAAGCTTTATGAAGATGCCCAAATGGCTCGAAAAGTGAAGCAGTACCTTTCCAATTTGGAGCTAGAAATGGACGAGGAGAGTCTTCAGACATTATCTCTGCAGTGTGAGCCAGCAACCAACACATGTGAGTTTTTCCTTAAAGTGGCTGCAGACTTT-----GGCTAGGATGCAGATTTGTTTCCTGTGCAG---------TGGTATGGGCAGTGACAAAATAAGGC chr4 + 94230402 23294871 23294870 23297477 23294871 23294870 23297477 2607 CTGTTGTTCTTTAACTTCTTGCAC-----TTTTTTGTTTGCTTCAAGTGGCTTGAATTTGGCACCGGTTGCAAGGCTCCGAACTACTTGGGAAAAACTTCCAAGCAAGTATGAAAAGCTGTTCCAAGATCTACAGGATTTGTTTGATCCATCTAGGAATATGGCAAAATACCGTAATGTCCTTAACAGCCAAAATCTGCAGCCCCCTATTATTCCTCTGTTTCCTGTTATCAAAAAAGACCTTACATTCCTTCATGAAGGTAAA-----AGCATAAGTGCTTCATCTCTTACCAGCTAAGAAACACTTGCTTTGGCACCCAATCACTG----ATGATGTTAGTTAT------TGTTAATTTTAGGAAACGATTCCAAAGTGGAGGGCTTAGTCAACTTTGAGAAGCTGAGAATGATTGCAAAGGAAATTCGCCACGTTGGTCGCATGGCATCTGTCAACATGGATCCTGCTTTAATGTTTAGAACTAGGTAAGTTTGTTGTGGAAGGCATAGCTTTTACCGGTTTGGAGAAGGCTAAGGAT---------CAGCAAGAGATGCTTTTCACTTGCCTCTCTGTGTACTTGGAG---AGTAAAAGATATATTTTTCTTCCTGTCAGCAGGCCCTTGGCAGTTGCTCAGTGAGCTCTGTATGAACAGGAAATGTTACTGATTTTCAGGGCTGATGTCTAACTCCTCTGAGTCCCTTTGATGCATTGGAGCAGTATGAGGTTTTTTTTTTGCTGTTAACAATTAACCAAAACCATGTATTGTTTTGCATATATCAAAGGAAGTTCTGCAACTGGAGAAATCATTAAATTCTGTGATTTTTcacacacacacacacacacacacGGATGTTTGTATTATTTCTTAGC-TGCTAGttattttatttaaaaaaaaaaGATTGCATCAGTTGAAGGGTGGGGGAGATGTGTTAGTTTGCTTGAAATGTCGATATGTGAGAGCTTTA--TCATTCTGATTTAATAGAAATGGGATTGTATTTGA--AACAGTGTAAGCTAGAGTCATTAA-------AAAATGTGGCATGAATGGTCTCTGCCTTCATGATAGACCAGC---TTAATGCGTATTATTTTCCTTAATTTGAA-------CTTAGAGGAGTTATCTGACTGTGTAGCTGAATCTTTTTAGTGTTTGTGGGCTTCTAGAAACTGCTTGTCCTTAGATCTGGTCTTTTTCTTTCTGAGCTTGTGATCTTTCTGTCTCTTCTT--AAACCCATGCTTTACTCTTCCTGGCTCTCACTTGCAGGAAGAAGAAATGGAGGAGTTTGGGGTAAGTGGTTGTAGACAATGCACACAGCCATTCA-TTCTTCCCTTGCCATTTGCATTATTTTCT-ACTTGCCATCTTTAATTTTCTGGTGCTTTGA-----TAC-TTTCTTTTGTTAACCCTGTTTTGTTTTGTTGTAACTGACAATGTTTTAGAT--------------------------CAGGGG----TGCTTTTGAGGTTA--ATACACAAAAGCTGTAAAATACTCAAGTGATTGT------AAATAGCAGTGGTGTGTTATTCCCACCACCTC--CAATTTCTGTTGCCAAAAAA-----GTGACTTTAAGT------------AAAAAGGAAATTGTGAAGTGGGAAGTTAGCAACGGCTAAAAATTGGTG----TTAACTTTCTTAAGGCT----GATAAACAATTACCACAGTCAAATAGAAAA-------------------AACTCCAAT---------ACCCGCTAA--ACTATTTTCCCACTAGAGTTCAACCATAACTTTT--------ATTCTTATCAATTCAGGAACAATGCATAGCTTTTATATAGATATGCATACATTAAAATCTGCATGACTTTTATGTCAGCATGAACTAGCAAATCATTTTTTAAAAAATGCTATTTTCAACCTAGGAAGTTAGAAGTAAGTTTTATTCCTTAAAGCTGGGTTA---TACATTC-TGTATATGGTCAGACTGAAAGCTCCCGAGATACTTTTAAGAAATGCCTTCTGTTACATGTCTTGAAATATAAACTTCAGCTGTAGACTTCTGTCAGCATTGCCTTATTGCATGAGCTTTTCC---TAATGCCCCAGTCTTCTCAATAGCTGGCTTATGTGA-AGAGCTAGCTTGAATGCTTTTCTTGATGTGTGAAGTGATACTGCCTAGATGGAGCAGAACAGGT--------TAAAATATT-TATGTAATTAAAGTAGTGCCTGTAACCAAGTAAAAAGATTTTCCTGATCCTCATCCTTCTATCT------GTAATAGCTGTTTGACTTACTGGAATGAGGCATGTGAGCTTT-GACCATAGACTGACATTCATGCAATCTTTTGCATGTTTCATGCTTGTTCAGTGATTCTGTGTCGGACTAACTCACACTTTCCCCTTTTTTTCCCCCTTCGTTCACTCCAGGTCTCTCAGCCAGGGCAGTACAAATGCAGCTGTGCTTGATGTTGCACAAGCAGGGGGTCATAAAAAGCGGGTCCGTCGCAGCTCCTTCCTTAACGCTAAAAAACTTTATGAAGATGCTCAGATGGCACGGAAAGTAAAGCAGTATCTCTCAAACTTGGATCTGGAAATGGATGAAGAAAGCCTCCAGACTCTGTCTCTACAGTGTGAGCCAGCCACCAACACATGTGAGCGTTGCC----ATTTGCTGTGGGTTGTAAGGAGGCTCTTAAATGGATTTCTTTCTAATACAAGGGAGTATTTGGGAATGGCAACTAGACAATGAGGC ..:..x.x.....:-..x..::..-----..:...x.:.x..::x......:.:..::.......:..x.....:..x.....x..:.....:........x.::..:..:.....:..:..:........x..:..::..........x..:..:..:...........:........:..:..:..:........:..:..:..:..x..:.....:..:..x...........:..:..:..x........:.........-----:...x.:.xx:.:.....:.---------------:....xxxx:....xx...x.x..----:....x.:xx..x:------...:.....:......:..:..x.....:..x..x:.:.....:...........:..:...........:........:........:..x.....x..x..x........:.....::.x.....:..:...x...:...x...::.xxxx:.--.:..x:x.::x:.xx.:.......:...:xx.---------..::..:x...x:....x.xx.x:xxx.x.x.:..:...x..---:.:.:..:x....x.------------..x.x.:x..x:.x.x:xx..--.........:x-----------------------..::.:::x:......x.:..:---------------------------....:.:..x..:...:x.....:.::..-------....x:.---....:..x..x.:..-------------------------------------------...:x.:::.-------.:.x.....xxx....x.x.x........:..x-::..:::.xx.xx.x:.....xxx.x..x.x.----------------------------....x...x:x...-----......:.:x:.:::.--.x:.::..x:.:....xxx.::x:.:x:-....::--.:.......:xxx.:...x.....-------...:x.x.:x.x.-------..x.:...x..xx....x..:x---..x.x::....xxx.:.::.x.:::x...-------::...x::....::x..xx..x.xx.x.x.xx.xx....:...................-......:...xx.::...:...:...-.............................::..--.x..........:.x...:.x............:................x...................x.-....xx....:..xxx..:x..-.....x:::...:xx.......:......-..:...::.-----........:.......x-----.:.-...:...:x........-------:x..:....:.x..----:...:....--------------------------:x....----.........:..:.--..x..::.:......:....:x.::.-.......------:..:x:...--.:xx...x...:x.x.x.:.x--x..x..:.:..x:..x.x..-----...x..:x..:.------------..:x...:::xx.x..:.x:...x:....x.:x.----....x.x...----.x..x.x.:.:.x:.x.----..x...:..x..:----:.:x....x....-------------------...:.x...---------x:.x:....--.........x:x..:x.--.x.....xxx.....--------.......x.......x.x:.--.xx..:.:..::...:.x.....:x......------.......:.x..x.:.:.:..-..x:x.x.:x..:.:...x-....xx::.:.:x......::.:.:x:.x.....xx.:....:xx.x..:x....::x..x---..x...:-......xx:..xxx:.x.:::-----..::..x......-----------....:..x:....:.x:-----.:.x:......-----------------.:x..x..............x.---....----:.x.x..:..------....x:x.....-...:..:x...:......:.x--.::x...x:....::x.:.x.....x....:.x........--------....x.x..-......-------..x.::x.....::xxx.xx...--....:xx:...:x:..:x......x.------....:..----..x...:...................x....-..x........---...x..::x.x::..x...::...:.x::xx:.xx...:x.:.::..:::..x.:.x:::..:x.x:x......:x..:------------....................:............:.x.....x........x..::....x.................x.....:..:.....:..:..:..:.....:..............:..:.....x..:.....:........:..:..x..:.....x..:........:..:..:..:..:.....x:.:.....:..............x...............:x..x..----.x.x....::.::.x.-----....xxx.x:::.....x....:x:.:..:---------...x.xx....::x.x.x...:.... 14M1I9M5D235M5D20M15I24M4D14M6D155M2I32M9D42M3D15M12I21M2I11M23I22M27I29M7I7M3I15M43I10M7I33M1D32M28I14M5I16M2D28M1I6M2D24M7D13M7I22M3D29M7D59M1I26M1I33M2D72M1I22M1D29M1D9M5I17M5D3M1D17M7I14M4I9M26D6M4D14M2D26M1I7M6D9M2I21M2D20M5D12M12D34M4I10M4D17M4D13M4I13M19D9M9D9M2D17M2I15M8D20M2I31M6I21M1I19M1I61M3D7M1D21M5I13M11I17M5I11M17I22M3D4M4I10M6I12M1D21M2I41M8D9M1D6M7I23M2I26M6D7M4I31M1D11M3I79M12I241M4D16M5I30M9I26M 1587/2290 69.3% 2607/94230402 0.0% 512/2290 22.4% 136048062 54166493 +9561 chr4 + 190214555 159346752 159346751 159347004 253 ATTCTTTGTTCTATTTTCAAACCCAAACAATTATCAGTGCCTAAGAATCCTGGTGACAAAAAGCCTGTCAAATCCGAGACCTCTCCAGTAGCTCCAAGGGCAGGGTCACAACAGAAAGCTCAGTCCCTGCCACAGCCCCAGCAGCAGCCACCACCAGCACATAAAATCAACCAGGGACTACAGGTTCCCGCCGTGTCCCTTTATCCTTCACGGAAGAAAGTGCCCGTAAAGGATCTCCCACCTTTTGGTAAGT chr4 + 94230402 23298130 23298129 23298351 23298130 23298129 23298351 222 ATTCTTTG--CTTTCTCCCATCTCTTGCAA-----AGTGCCAAAGAATACAGGAGACAAGCGATCTGGAAAATCTGAAACATCACCGGTGGCTCCCCGGGCAGGAATTCAGCAGAAAGTGCAG---------------CAGCAGCAGCAAT---------ATAAAGTAAACCAAGCACTGCAGGTCCCTGCTGTATCTCTTTATCCCTCTCGCAAGAAAGTGCCCGTCAAAGACCTCCCACCATTTGGTAAGT ........--..x.:.:.x.x.:.xx:...-----......x......x.x..x.....:x:::...xx.....:..:..x..x..:..:.....xx.......:x:x..:.......:x...---------------..........x.:---------.....:.x.....:.x...:.....:..:..:..:..:........:..x..x..............x..:..:........x.......... 8M2D20M5D88M15D13M9D93M 168/222 75.7% 222/94230402 0.0% 31/222 14.0% 136048622 54165933 +13180 chr4 + 190214555 159350120 159350119 159351252 1133 TTTTTTTTCCATTATAGGCATAAACTCTCCACAAGCTTTAAAAAAAATTCTTTCTTTGTCTGAAGAAGGAAGTTTGGAACGTCACAAGAAACAGGCTGAAGATACAATATCAAATGCATCTTCGCAGCTTTCTTCTCCTCCTACTTCTCCACAGAGTTCTCCAAGGAAAGG---TAGAATTAAATTACTTTTTGTTTTCTTGTATTGAAACCTATACATTTTGG------CTATAATAAATTC--------CAGAGTAATGTATTAC-ATAATTCCTAACAT-TATAGTCATTTA---------AGATGA-GCTCATTTGCAATGCCCAATGGATTTTTTTTCCCTCAGTTTATAAATTTGGAAGAATGGTGGTTT--TAAAAAATGTTATACTTACAATAAATAGTATTAAATTTATAACTATAAGAAGCCTTTTAAAAATA-CATTTACTTTTA----------ATTCAGATAAATATACAAAGAATTTTTTATATTACAATTTGTTC----------TAACTAAATTTGGTTATATGACATTAGTACAGAGAAGA---GGGCTTTG-AAAACATGAAAAACTAATATCTTCCTGATTTATTTT----TTCATTGTATTAACACAGGTCTTGATTACCTTTTTG---GTTGCTACCTTGTTTTATTTTTAGAGACTATATT-----TTAGGTACTCAGTCGCCTCCTTATGTTGATACATTCTCATATTAAAAGAGT-------------AGGTAATTTTCTGCTGCATAACTCTTCAGGCT-ACTTCCTCCTCCTACCCTTTTAACTAAATGAGTGTAAGCCAATAATAAATGGCTAGGACGTAGTTTTCCCTAAAGGAAAGCCAAAAGGGCTTAATACATTGTTAAATTTCACT-GACTCAACAGGTATTGCTTTACTTGGTAGATATTTCAGACATCTGTG---CATTTTGTATGGGTATCAGTCTCTCCTG--TCCTTGTTACATGGATGCATCTCAATTCTTTTCTCATCCTGTTGTTAGGTGGCAGTGGCAATCAGCTGAGATCTTTTGGCTCCGGGCAGTTGGACTTAACCAGTTCCTCCTCTTCTCTTGGAAGTGAGAACAGTAACAAGAATAACAATGCACCACGGACCTATGGGATAGGTGGGGTTTATAGAACCAAAAATGGGGTGGGAAAGAGAGGAATCATCTCATTAGTTAA---------TGAAAATGGGAGA chr4 + 94230402 23300034 23300033 23301158 23300034 23300033 23301158 1125 TTCATTCTTACTTAAAGGCATTAACTCCCCACAAGCTTTAAAGAAAATTCTTTCATTATCTGAAGAAGGAAGTCTGGACCGCCACAAGAAACAATCTGAAGACACAGTATCAAGCGCATCTTCACATCTGTCTTCTCCTCCCACCTCACCACAGAGTTCTCCAAGGAAAGGTACTAGATGCAGAACATTTCTCATTCTGTT-TCCTGAAGGTCGTAGACTTCGGAAGTTTCTGAAAGAAAATCTGTACATTCAGAATAAATTACTGCTCCTGTTTCAGGCACATATGGTCAGCAAGAGAGCAGGAGGTGGTGCTCAAGTGGGACAGCTGAAGGCCCTGCTTGATAGCAGTAGGCA-------AGGAATCCTGAACTGATACAGGATGTGATGCATTAGGTCACTCTCATTACAGCTGCTTCTGACAAAAGTATTCCCATCAGAGCATCTTCTGCCAGTGGCAGTACATGCAGATTGCTGTACAAGA----TTTTAAACTTCACTGAGCTCATTAACCTATTAAAGGAATTATTTACTCTGTCATCCGGCTGGGTAGGATGTGGCCTTTGTATGACAGGCAAGCTTAAGTTATTTGGGATACAAATCATAAATAATCATTTTAATA-GGGGCATAATTAATTATTCAAACGTGGATA-----------TTTGAGGAATGGTATTGCACATTGGGAACT-------TTCTTGGTGGTGTTAATTT------TTAAAAGATTTTGGTCATATTTAAAATGAATTTAAAATGCATA--TATTGAGGTTGAGTTCC--------------------------TGTAAT---AAAATAAAATGCCAAAGCGATGTATGTGTTGGAGGC------------TTTGCTGTAGCAGTAACTTTCCCCAAACTGCACAGAGATT----------ATAAGGTTTTGAAACATGCATGTATCAtttttttttttttttttttttttttactttcttttCAAGTGGAT--AGCTAAACCCTTTCCTTAACC---TGGTAGGTGGCAGTACTCTGTAACCGAGACCCTGGAGTTCCAAACTAATGGATCCAACCAGTTCCTCCTTTCTTCTTAGAATTGAGAGCAGTAGTAGGAATATCAATTCACTATAGACCTCGGAGATAGATGGGGTTAATGGAAACCAAA-----GGGAGAAAAATAAG-----TCCAACTGGGTAAGCTGAGAACTGAAAAGAGGAGA ..:x..:.:xx...x......x.....:..............:...........x..:...............:....x..:...........:x.......:...:......::........:..x..x...........:..:..x.......................---....xx:.:.x:.:..:.::..:.x..-.x:....:x:::..x.:..:..------..:x..x...x..--------....:...xx..:.:.-x:x:..:.x::..:-...:....x:x.---------..:..:-.....xx..x:.::x.::.x..x::.x:..xx:xx....xx::.-------.:....xx..:x:.--..x.::....x..:.x.xx::.x.x.xx:....x.x:.::xx..:xx.:...:x..::x.xx.x.-...:.x..x::.----------..x.....x:x.:.....::----.....x.:.x..x.xx.:..----------...xx:....xxx.xx.x..x...:x.xx::.:x.:..---..x.....-.x:...x.x..:x:...xx.x..:xx...x:.xx.:----x.x..::.x....:.-:..x.x.:....x:.x..::---..x.x..-----------...x..::.:x:....-----..:..x...-------:..:.x:..x..x..xx..------........x.-------------.::.:.x...xx:x......--.x..x...:.-.x....--------------------------.....x---.x......xx..:.:::..xx..x.x:x:.::...x------------:..:x.::.x::x...x....x.:-:...xx....:x...----------:..::xx...x.:....x::..---......x.x.xxx.x.:xx.:.:.::.:--.:...x.:.x:.....--.x..x..::....:..:.x..---..x...........:x:xxx:.:.:....:.:.xx:.:...:::.x:x....:::..............:.::....:...x.....:.....::.:.....x....x...:.::.....xx.:.....:.......x..:...x.x...-----.x.:....:.x.:.-----..:x.:.:.x...---------......x:..... 171M3I27M1D22M6I13M8I16M1I14M1I12M9I6M1I44M7D14M2I65M1I12M10I20M4D20M10I38M3I8M1I36M4I15M1D20M3I7M11D16M5I9M7D19M6D10M13I20M2D10M1I6M26D6M3D36M12D24M1I15M10D22M3I28M2I16M2D21M3D150M5D14M5D13M9I13M 658/1028 64.0% 1125/94230402 0.0% 202/1028 19.6% 136050086 54164469 +17214 chr4 + 190214555 159352650 159352649 159352953 304 AGAGTCTAATTAATACGGTTGTATTTCTCATGCAGGCTATACTTTGGCTCCCAGTGGTACTGTGGATAATTTTTCAGATTCTGGTCACAGTGAAATTTCTTCACGATCCAGTATTGTTAGCAATTCGTCTTTTGACTCAGTGCCAGTCTCACTGCACGATGAGAGGCGCCAGAGGCATTCTGTCAGCATCGTGGAAACAAACCTAGGGATGGGCAGGATGGAGAGGCGGACCATGATTGAACCTGATCAGTATAGCTTGGGGTAGGTGGCTCTTTTTAATATTCTT-CTGAATTTATCCTTCCAT chr4 + 94230402 23302349 23302348 23302642 23302349 23302348 23302642 294 AGAATCTGATTAA---AGTGATATTCCCTTTGCAGGTTACGCTTTGGCTCCCAGTGGCACAGTGGATAACTTTTCAGACTCTGGTCACAGTGAAATTTCTTCCAGATCTAGTATTGTCAGCAATTCCTCTTTTGACTCCATGCCAGCGTCCCTGCATGATGAGAGGAGACAGAGGCATTCTGTCAGCATTGTGGAGACTAATCTTGGCGTGGGAAGAATTGATAGAAGGATCATGATTGAACCAGATCAATACAGCTTAGGGTAGGAATTT--------TATTCTTACTTAAATTATACTTTCAT ...:...:.....---:..x:....:.::x......:..::................:..x........:........:.......................xx....:........:........x...........x:......:x..x.....:.........x.x....................:.....:..x..:..x..x:....x..:..x..x..:x...:............x.....:..:.....:.......x:x:.--------.......-..x..x....x...:... 13M3D255M8D7M1I18M 238/293 81.2% 294/94230402 0.0% 12/293 4.1% 136050301 54164254 +10020 chr4 + 190214555 159353449 159353448 159353730 282 TGTTTTTTTTTTCTTTTCCATTTCTTTTAACCACTTAGGTCCTATGCACCAATGTCCGAGGGCCGAGGCTTATATGCTACAGCTACAGTAATTTCTTCTCCAAGCACAGAGGAACTTTCCCAGGATCAGGGGGATCGCGCGTCACTTGATGCTGCTGACAGTGGCCGTGGGAGCTGGACGTCATGCTCAAGTGGCTCCCATGATAATATACAGACGATCCAGCACCAGAGAAGCTGGGAGACTCTTCCATTCGGGCATACTCACTTTGATTATTCAGGGGAT chr4 + 94230402 23303856 23303855 23304130 23303856 23303855 23304130 275 TGTTTTTTATCCCCTCTTCAATGTG------CATCTAGATCTTACGCACCACTGTCAGAGAACAGAGGCCTGTACGCTGGAGCTACTGTTCTGTCTTCTCCTAGTACAGAAGAACTGTCACAGGATCAGGGGGACAGAGCTTCACGCGATGCAGCGCTTCTCTGCCGTGGTAGCTGGACTTCTTGTCCAAGTGGTCACCAGGACAACATGCACACAATACACCACCACTGACGCCGGCATCGGCTGCCTCTCTGTCACGCTCA-TCCGATAACACAGGCGAT ........x.::.:.:.:..x.x:x------..::...:..:..:......x....x...::.x.....:.:..:...:x......x..xx.x........x..:.....:.....x..x..............:x.x..x....x:.....x..xxx:xx:x.......x........x..x..::.......::x...x..:..:..:..x..:..x..x.....xx..x..:..x.xxxx..x..x:..x.x..::....-.::...x.:x....x... 25M6D232M1D18M 188/275 68.4% 275/94230402 0.0% 7/275 2.5% 136049593 54164962 +28633 chr4 + 190214555 159353566 159353565 159354053 488 TCCCAGGATCAGGGGGATCGCGCGTCACTTGATGCTGCTGA----CAGTGGCCGTGGGAGCTGGACGTCATGCTCAAGTGGCTCCCATGATAATATACAGACGATCCAGCACCAGAGAAGCTGGGAGACTCTTCCATTCGGGCATACTCACTTTGATTATTCAGGGGATCCTGCAGGTTTATGGGCATCAAGCAGCCATATGGACCAAATTATGTTTTCTGATCATAGCACAAAGTATAACAGGCAAAATCAAAGTAGAGAGAGCCTTGAACAAGCCCAGTCCCGAGCAAGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTCAGAAGGTGACACAGGCACAATAAAGCGGAGGGGTGGAAAGGATGTTTCCATTGAAGCCGAAAGCAGTAGCCTAACGTCTGTGACTACGGAAGAAACCAAGCCTGTCCCCATGCCTGCCCACATAGCTGTGGCATCAAGTACTACAAAGGGGCTCATTGGTAAGTT chr4 + 94230402 23305878 23305877 23306369 23305878 23305877 23306369 492 TCACAGGATCAGGGGCACAGAGGGTCACTCGATGCAGCTGAATCCCTACACATGAGGTACCTGGACTTCTTGTTCAAGTGGTTCTCATGACAACATTCAAACAATACAGCACCAGAGAAGCTGGGAGACGCTGCCTTTTGGACACGCTCATTTTGATAATTCAGGCGATGGGGCAGGACTGTGGGCCTCAGGCAGTCATGTGGACCAGCTGATGTTCTCCGATCATGGCACAAAGTACAGCCGGCAAAGTCAAGGCAGGGAGGGCCTCGATCAAGCACAGTCCAGAGCAAGCTGGGCATCCTCAACGGGCTACTGGGGAGAGGACTCGGAAGGTGACACAGGTACCATAAAGCGAAGGGGTGGGAAGGATGTTTCTGTTGAAGCTGAAACCAGCTGCATAACATCCATACCAGCAGAGGAGGCGAAGCCAGCTCCCATGCCCGCTCACATACCGGTAACATCAAGTACTACAAAGGGGCATATTGGTAAGTT ..x............x.:x.x.x......:.....x.....----.x:::xx:.x..x.x......x..x..:........:..:.....:..:..x..:..:..x.......................x..x..x..:..:..::....:......x.......x...xxx.....x:.:.....x...:....:...:.......:x.x.....:..:......:..........:.:.x......:....:.:..:...:....:..x.....x......x.............:..:..x..:..:...........:.....:..............:..x........:........:...........::.......:....x...:x..x....:..::.:x.x:.:..:..::.x.....x.::........:..:......x.x..::.....................x:........... 41M4I447M 380/488 77.9% 492/94230402 0.0% 4/488 0.8% 136047688 54166867 +16970 chr4 + 190214555 159355839 159355838 159356164 326 TGTTTCTACTCTAGCACGAAAGGAGGGCAGGTATCGAGAGCCCCCGCCCACCCCTCCCGGCTACATTGGAATTCCCATTACTGACTTTCCAGAAGGGCACTCCCATCCAGCCAGGAAACCGCCGGACTACAACGTGGCCCTTCAGAGATCGCGGATGGTCGCACGATCCTCCGACACAGCTGGGCCTTCATCCGTACAGCAGC---CACATGGGCATCCCACCAGCAGCAGGCCTGTGAACAAACCTCAGTGGCATAAACCGAACGAGTCTGACCCGCGCCTCGCCCCCTATCAGTCCCAAGGGTTTTCCACCGAGGAGGATGGTATAT chr4 + 94230402 23308938 23308937 23309263 23308938 23308937 23309263 326 TGTTTTTCTTGCAGCACGAAAAGAAGGTCGGTATCGGGAACCACCTCCAACTCCTCCTGGTTATGTAGGAATACCTATTGCTGAGTTTGCAGAAGGTGTTTCCCATCCAACTAGAAAGCCTCCGGATTACAACGTAGCACTTCAGAGGTCTAGAATGGTGGCACGGACGTGTGAGACCCAGGGGACGTCGGCTCAACAGCAACAGTCACATGGCCATTCAACTAGCAG---GCCTGTGAACAAACCTCAGTGGCATAAACCAAACGAGTCAGATCCACGTCTTGCTCACTATCAGTCTCAAGGGTTTCCCACAGAGGAAGATGGTAAAT .....:.x:.x:.........:..:..:x.......:..:..x..x..x..:.....:..:..::.x.....x..:...:....x...x.......xxx:.........:.:..:..:..x.....:........:..x........:..xx.:.....x.....:x.x.x:..x..xxxx...x.x..:x.:xx......:.---.......x...:.x..:.....---..............................:........x..:..:..:..:..:.x.........:.........:....x.....:.......x.. 203M3I22M3D98M 246/323 76.2% 326/94230402 0.0% 6/323 1.9% 136046901 54167654 +109264 chr4 + 190214555 159358077 159358076 159360197 2121 CTCATTGATTTCTTTTTCTTCCCTGCTGTATTTGCAGAAGATGAACAAGTTTCTGCTGTTTGAGGCACAGA-CTTTTCTGGAAGCAGAGCGAGCCACCTGAAAGGAGAGCACAAGAAGACGTCCTGAGCATTGGAGCCTTGGAACTCACATTCTGAGGACGGTGGACCAGTTTGCCTCCTTCCCTGCCTTAAAAGCAGCATGGGGCTTCTTCT-----------------CCCCTTCT--TCCTTTCCCCTTTGCATGTGAAATACTGTGAAGAAATTGCCCTGGCACTTTTCAGACTTTGTTGCTTGAAATGCACAGTGCAGCAATCTTCGAGCTCCCACTGTTGCTGCCTGCCACATCACACAGTATCATTCCAAATTCCAAGATCATCACAACAAGATGATTCACTCTGGCTGCACTTCTCAATGCCTGGAAGGATTTTTTTTAATCTTCCTTTTAGATTTCAATC-CAGTCCTAGCACTTGATCTCATTGGGATAATGAGAAAAGCTAGCCATTGAACTACTTGGGGCCTTTAACCCACCAAGGAAGACAAAGAAAAACAATGAAATCCTTTGAGTA--CAGTGCTTGTCCACTTGTTTACAATGTCCTCCTTTTAAAAAAAAAAAATGAGTTTAAAGATTT-TGTTCAGAGAGTAAATA-TATATCCATTTAATGATTACAGTATTATTTTAAACCT-TAAGTAGGGTTGCCAGCCTGGTTTCTGAAAAACCAAATATGCCGGACAGGGTGTGGCCACACCAAGAAGACGGGAAGACCTGGCTTGT--GACCCTGGCTTCCCATGTCCTTCTGGTCTCACCCGCGAAGTGCCCTATCCTGGAAG--TATGAAATGTTAGCCAATTAATACCAAGACACCTCATCTGCTCCTTCCCCAGTGGATGGGGTT----------CTTCTGTAAAACTGTTTGCACATGGC----CAGGGGAGGGAACTAGGAC-CCTTGTGTCCTGTCTGAGCCTTATGG-AGGCAGGACGGTGTCATTGGCG-GATGTGTCCTGCTCCATTGAGATGGATGGCAAACCCCATTTTTAAGTTATATTTC--TTTGATTTTTGTTAATTTAGAGGTGTAGGTTTTGTTTTTTGTTTTTTTGTTTTT---------------TTTTAAGAGAAACATTTATAACTGGATAGCATTGCAGTGAAAGCAGCTTGGGATGTTGGAGCTAATGCCAGCTGTTTATACTGCTCTTTCAAGACAGCCTCCCTTTATTGAATTGGCATTAGGGA-ATAAACAAGCCTTTAAACGTGATAAAAGATCAAAAACCTGGTTAGACATGCCAGCCTTTGCAAGGCAGGT-TAGTCACCAAAGACTAACCTCCAAGTGGCTTTATGGA-CGCTGCATAT--AGAGAAGGCCTAAGTGTAGCAACCATCTGCTCACAGCTGCTATTAACCCTATAATGACTGAAATGACCCCTCCACTCTATTTTTGTGTTGTTTT-GCACAGACTCCGGAAAAGTGAAGGCTGCCAATCTGAGTAGTACTCAAATGTGAGGAACTGCTGGTCTTGGATTTTTTTT---CCATTAAATTCAGCTGATCATATTGATCAGTAGATAAACGTAAATAGCTTCAAATTTTAAAAGTGGAATTGCAGTGTTTTTTCACTGTATCAAACAA-TGTCAGTGCTTTATTTAATAATTCTCTTCTGTA-TCATGGCATTTGTCTACTTGCTTAT----TACATTGTCAATTATGCATTTGTAATTTTACATGTAATATGCATTATTTGCCAGTTTTATTATATAGGCTATGGACCTCATGTGCATATAGAAAGACAGAAATCTAGCTCTACCACAAGTTGCACAAATGTTATCTAAGCATTAAGTAATTGTAGAACATAGGACTGCTAATCTCAGTTCGCTCTGTGATGTCAAGTGCAGAATGTACAATTAACTGGTGATTTCCTCATACTTTTGATACTACTTGTACCTGTATGTCTTTTAGAAAGACATTGGTGGAGTCTGTATCCCTTTTGTATTTTTAATACAATAATTGTACATATTGGTTATATTTTTGTTGAAGATGGTAGAAATGTACTATGTTTATGCTTCTACATCCAGTTTGTAC-AAGCTGGAAAATAAATAAATATAACATAAAGCCTTGCCTATAT---TCTTAATGAATCATGCATGCTTTTTATTATTAAA chr4 + 94230402 23310510 23310509 23312615 23310510 23310509 23312615 2106 CTAAATGATATTTTCCCCTGTCCTGTTGTGTTTGCAGAAGATGAACAAGTCTCTGCTGTGTAAGACTTGGGGCTTTTCTGGATCCAGAGTGAAACACCTTAAAGGAGAGCACAAGAAGACGTCCCTAGAATAGGAGCCTTGGAAC-CATAGTTAAAGGATGGTGGACCTGTTTGCCTCCTTCCCTGCCTTAAA-GCAGCATGGGGCTTCTTCCTCCACCCCCCCCAAGCCCCCTTTCTGTCCCTTTTCCCCTTGCATGTGAAATACTGTGAAGAAATCGCCCTGGCACTTTTCAAACTGTGTTGCTTGAAATGCACAGTGCAGCAATCTCCAAGCTACCACTGTCGCTGTCTGCCACATCACACAGTATCATTCCAAATTCCAAGATCATCACATCAGGATGAT-AACTCTGGCTGCACTTCCCAATGCCTGGAAGGGTTTTTT--AATCTTCCTTTTCAATTTTAATCATGATCCTAGCACTTAGTCTCATTGGGATAATGAGATAAGCTAGTTGTCAATTTATGTTTGGCCTTTAACCTACCAAG------AGTGGAATGCATTGAAATCCGTCAAGGAGGCAGTGCTTATTTGCTTGTTTACAGCGCCTTTGTT-------------ACAATTTTGTACGTTTGTGTTCTGAGATCAAATACTGCATCTGCCTAGTAATTACAGTATTATTTCCTACCTGTAAGTAGGGTTGCCAGCCTCAGCTCCCAGATAGCA--TCTACCTGCCA---TGTGGCTGAGCAGGGCAGAAGGGAAGGCAGAGGCTGCAGGATGCAGCCTTTCC-CAACTGTCTAGCTTCTCTCTTAGTGTGTCCCACCCTGGAAGCTTCTGGACTCGT-GCCCGTTAGT-----------------------------GGGGATGGCGTTGGGTCTAGGATCAGTGCAGAGCCATGCGCTTACAGCTCTCCAATGAAGGAACAGCGGACACCATGCCTCGTACCTGTGCCTTGTGGGATACAGGACGGCGTGCTCAAAACAAAGTATCCCATTCTAATGAGACAGACGGCAA-CCTCACCTTTAAGTTATATAttatttctatttttgtt----------tgttgttttttttttttgttttgtttttTTTACTCTATAGTAGTTATATTATGAGAAAAATT---AACTGGATAATGTTGCAGTGAAGGCAAGCTGGGATGGCACAGCTCCTGACAGCTGTTAGTATTGATTT-----AATAACCTCCATCTATTGACTTGGCATTAGGGGGATAAACAAGCCTTTAAGT------AAAGAAGAATAACCTTTTTAGATATGCCAGCCTTTGCAATGCAGAAATAGTCACAA---------CTGTTAATGGCTTTGTGGAACACTGCATGTGTAGAGAAGGCCAATGTGTAGCAACCACCTGCTCACAGCTGCTATTAACC-TATAACGACTGAAATGACCC-TCCCCTCTATTTTTGTGTTGTTTTTGCACAGACTCCGGAGAAGTGAAGGCTGCCAATCCGAGTAGTACTCAAATGTGAGGAACTGCTGGTCTTGGATTTTTTTTTTTCCATTGAACTCAGCTGATCATATTGATCAGTAGATAAACGTAAATAACGTCAACTTTTAAAGATCAAAATGCAGTGTTTTTTCACTGTATCAGGCAAATGTCAGCGCTTTATTTAATT-CTCTCTCCTGTAATCATAGCTTTTGTCTATTTGCTTATATATCACATTGTCAATTACGCATTTGTAATTTTACATGTAATATGCATTATTTGCCAGTTTTATTCTCAAGGCTATGGACCTCATGTGCATATAGAAATACAAAATCCTAGCTCTATCACAAGTTGCACAAATGTTATATAAGCATAAAGTAATTGTAGACCATAGGACTGCTAATCTCAGTTCGCTCTGTGATGTCAAGTGCAGAATGTACAATTAACTGGTGATTTCCTCATACTTTTGATACTACTTGTACCTGTATGTCTTTTAGAAAGACATTGGTGGAGTCTGTATCCCTTTTGTATTTTTAATACAATAATTGTACATATTGGTTATATTTTTGTTGAAAATGGTAGAAATGTACTATGTTTATGCTTCTACATCCAGTTTGTATGAAGCTGGAAAATAAATAAATATAACATTAA-TGATGTCCATATTGATTCTTATGCATTTTACATGTTCCGCATACTTGAA ..x.x....x.:..:::..x:....:...:....................:........x.:..:.x::.:-..........xx.....:..:x.....x........................:x..x..x.............-..:.x.:x:....:........x........................-..................:-----------------...:....--:.....:...:..........................:................:...x..............................:.:....x.......:....:............................................x..:......-x................:..............:......--............x:....:....-:::...........::...................x.......:::.::.x:..:x.xx...........:......------.:x.:..x:..x........x.::..x.--........:.:::..........::.:.:.:x..-------------.::.x...:x.x:...-.....x....x:.....-.::...::::..:.:...............:xx....-...................x:x:..:x.:.x.x..--.x.:..x.x..---......::x:.x::.x...x......:.xx:.x:..:--..:x.x.x...:..-::x.:x...:.::..x.:.x:::x...:..:.:........--.x..:.x.xx.-...x:...:.-----------------------------.x......x...----------::xx..:.:.:.::.x:..x:.::..----..:x.:...:.xxxx....-..x..:x..x.::...x.....:...-.x:........:..xx.:::x:-:.x..:...:::..:.x.....::..:.....-..:..::............x.:--..:x.........----------...x.x....x...........x..x.....---------------.x...x......x...---.........:::..........:...:x:.......x::x....xx..x........x:..:..x.:.-----:.:.:.....x.:......x............:-................::------.....xx..x.....xx.....:................x....:x-.......x.---------..x:x.:.......:....-.:......:.--..........x.x............:......................-.....:..............-...x....................-..............:..................:.............................................---.....:..:.....................................:.x....x.......::.x:..x.......................::...-......:............x-:.....:.....-....:..x........:........----:.............:..............................................x.xx.............................x...:..x:.........:.....................x.......x.............x.........................................................................................................................................................................................:............................................:-...........................x..-:xx..:.:....---.::.x...x..:x.:....:.::x:..xx..:.. 71M1I73M1D47M1D19M17I8M2I164M1D39M2D23M1I77M6D28M2I34M13D16M1I17M1I37M1I35M2D11M3D37M2I14M1D41M2I11M1D10M29D12M10I26M4I19M1I26M1I22M1I32M1D22M2I13M10D31M15I16M3D68M5D33M1I18M6D46M1I9M9D19M1I10M2I48M1D20M1D24M1I79M3I97M1I20M1D12M1I25M4I388M1I30M1D12M3I34M 1671/2023 82.6% 2106/94230402 0.0% 181/2023 8.9% 136047567 54166988 +3332 chr4 + 190214555 159362825 159362824 159362916 92 GTGCACCTGTAGTCCTAGCTTCTCAGGAGGCTAAAGTAGGAGGATCACTTAAGCCCAGGAGTTCAAGGCTGCAGTGATCTATGATGATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.:....x..::::.....:.:x:xx.x.:.x.....:.:.....:..:.:x:.....:..------.xx......... 74M6D12M 59/86 68.6% 86/94230402 0.0% 6/86 7.0% 83329621 NA +3840 chr4 + 190214555 159366046 159366045 159366119 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACAAGAATCATTTAAACCCGGGAGGTGGAGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::........x.x::x...x..:..:.....:.:..x.xx:..:..... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 83332842 NA +3078 chr4 + 190214555 159371342 159371341 159371411 70 CATGGTGGCGGGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x.:....:...........::........x.xx.x...xx:.x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 83338145 NA +3044 chr4 + 190214555 159372748 159372747 159372821 74 GTGCACCTGTAGTCCCAGCTATTCTGGACGCCAAGGTGGGAGGATCCCTTGAGCCCAGGAATTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.......:.:x::.x..::..x:xx.x.:.x.x.....:.....:.::..x:.....:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 83339544 NA +3092 chr4 + 190214555 159377370 159377369 159377428 59 ATATCTCAT------TTGGTTTATCTTAATTTCTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTGT chr4 + 94230402 153440 153439 153504 153440 153439 153504 65 ATACCTTATCAAATGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGT ...:..:..------..x.::.:x...:....x.............:...:.........x.... 9M6I50M 47/59 79.7% 65/94230402 0.0% 6/59 10.2% 159223930 30990625 +3135 chr4 + 190214555 159377390 159377389 159377424 35 TAATTTCTCTCTCTCTCTCTTTCTTTTTTTTTTTT chr4 + 94230402 26578263 26578262 26578297 26578263 26578262 26578297 35 TAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTT ....................:.............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 132799127 57415428 +3118 chr4 + 190214555 159385402 159385401 159385443 42 ATTTAAAAAAAATATATGTACACACACACACACACACACACA chr4 + 94230402 85550411 85550410 85550452 85550411 85550410 85550452 42 ATTTTAAAAAATTATATGCACACACATACATACACACACACA ....x......x......:.......:...:........... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 73834991 NA +3505 chr4 + 190214555 159395291 159395290 159395349 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCTTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.............. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 83362085 NA +3707 chr4 + 190214555 159399480 159399479 159399553 74 GTGCACCTGTAGTCCCAGCTGCTTGGGAGGCTGAAGTGGGAGGATCATTTGAGCCCAGGAAGTTGAGGCTATAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:......:....::.......:x:xx.x.:.x..:....:.....:.:x..x:....:... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 83366276 NA +3174 chr4 + 190214555 159402724 159402723 159402794 71 AAGAGAGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTAT-------GCTGTCAGTTCTTTTCTT chr4 + 94230402 39858768 39858767 39858845 39858768 39858767 39858845 78 AATGGGAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAATCTTATTTGGAGGACTTTCTTTTCCTTTCTT ..x:.::..:...:....x..............x..x....x......::...-------:..x..xx...:...... 53M7I18M 54/71 76.1% 78/94230402 0.0% 7/71 9.9% 119543956 70670599 +3229 chr4 + 190214555 159403134 159403133 159403199 66 TGTAGTCCTAGCTACTTGGGAGGCTGAGATGGGAGGATTGCTTGAGCCCAGGAGATTGTGGCTGCA chr4 + 94230402 76033211 76033210 76033276 76033211 76033210 76033276 66 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......:.:.........::........x:xx.x.:.x::.....:.....:..x..xx.....:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 83369923 NA +3220 chr4 + 190214555 159418121 159418120 159418203 83 CAGAGTGGCACATTCCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGTCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.....::..--.x..:.:.:...........::........x.xx.x...x::........::.:..::xx:..:..:.. 12M2D69M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 83384924 NA +3058 chr4 + 190214555 159418261 159418260 159418319 59 AAAAAACAAAACACAAAAAAACAAAAAACAAACCAACAACAACAACAAAAAAAACTAGA chr4 + 94230402 49206628 49206627 49206686 49206628 49206627 49206686 59 AAAAAAAAAAACACACAAAAGCAAACAACCAAACAACGACAACAAAAGAACAGGGTAAA ......x........x....:....x...x..x....:.......x.:..x.::x..:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 110211633 80002922 +3038 chr4 + 190214555 159418275 159418274 159418343 69 AAAAAAACAAAAAAC---AAACCAACAACAACAACAAAAAAAACTAGAAGCCTACTAAGATTTCAAGGGAAT chr4 + 94230402 14051625 14051624 14051696 14051625 14051624 14051696 72 AACAAAATAAAAAACCCCAAGCAAACAACAACAACAAAAAAAACATAACCCCCCCCTAAACTTAAAAGGAAT ..x....:.......---..:.x.....................xx:.xx..:x.:x.:.:..x..:..... 15M3I54M 52/69 75.4% 72/94230402 0.0% 3/69 4.3% 145366650 44847905 +3668 chr4 + 190214555 159418278 159418277 159418330 53 AAAACAAAAAACAAACCAACAACAACAACAAAAAAAACTAGAAGCCTACTAAG chr4 + 94230402 79648968 79648967 79649020 79648968 79648967 79649020 53 AAAACAAAAAACAAACAAACAACAACAACAAAAAAAACTGAAGGGTTTTTAAG ................x......................::.:.x:.x:.... 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 79769310 NA +3417 chr4 + 190214555 159423116 159423115 159423190 75 GGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x....x......:.........::::........x.xx.x...x.:........::.:..x:xx:..:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 83389913 NA +3060 chr4 + 190214555 159431174 159431173 159431236 63 CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTTTC chr4 + 94230402 13214821 13214820 13214883 13214821 13214820 13214883 63 CTTCTTATGTTCCTTAGTTCATTGCTTGCCTTCTTCCCTCCTTTCTGTCTCTCTCTCACATTC ....:.x:x......xx...x..x...x.:.:.....:.....:..x..........x.x... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 146216353 43998202 +3222 chr4 + 190214555 159455257 159455256 159455335 79 GTGGTGGGCGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--....:.:.......:...::........x.xx.x...x.:........::.:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 83422056 NA +3386 chr4 + 190214555 159457359 159457358 159457436 78 GTGGCACACGCCTGTAGTCCCAGCTATTTGGTAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....::....--......:.......:...:x........x.xx.x...x::.........:.:..x.xx:..:..:. 10M2D66M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 83424158 NA +3511 chr4 + 190214555 159465860 159465859 159465987 128 TGCTGGCCTTACTCTCTAATTTATCTAATCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCTT chr4 + 94230402 49829801 49829800 49829927 49829801 49829800 49829927 127 TGCTGGAGTTTCTCTCTAATTTTTCTAGTGAGAATTCCATTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCC-CCCCCCCTCCCTCACACACACACTTTGTTTTT ......xx..x...........x....:.xxxxx..:.x..:::.x:xx.:.x::..:x::.x..:...:...::..:....:.......::...-:..::........x.x.x.x.x..::x.::.. 95M1D32M 78/127 61.4% 127/94230402 0.0% 1/127 0.8% 109636059 80578496 +3234 chr4 + 190214555 159466321 159466320 159466362 42 CCTTTCCCTTTCCCCTTCCCTTCCCTTCCCTTTTTCCTTCCT chr4 + 94230402 51227418 51227417 51227459 51227418 51227417 51227459 42 CTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTTT .:............:............:.......:...::. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 108238903 81975652 +3084 chr4 + 190214555 159510394 159510393 159510426 33 GTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 17384412 17384411 17384444 17384412 17384411 17384444 33 GTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 142125982 48088573 +3043 chr4 + 190214555 159511486 159511485 159511531 46 TCAATCTTTTTCTTTTTCTTTTCTTTTTTTTTTTTTGAGACAGAGT chr4 + 94230402 51392809 51392808 51392854 51392809 51392808 51392854 46 TCAGTATTTTTCTTTTTCTTTTCTTTTTTCTTTTGTTAAACACAGT ...:.x.......................:....x.x.:...x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 108118677 82095878 +3888 chr4 + 190214555 159518212 159518211 159518285 74 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........::::........x.xx.x...x................x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 83485008 NA +3040 chr4 + 190214555 159549904 159549903 159549984 81 TCTTTTCTTCTTCTTTTTTTGTCCTCCTCCTCCTTTTTTTTTTTTTTTCTTTTTTTCTTTTGAGACAGAGTCTCGCTCTGT chr4 + 94230402 15335367 15335366 15335447 15335367 15335366 15335447 81 TCACTTCGTACTCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTTATTACTGATGCCTTTTCTGT ..x:...x.x:...:....:x...........:..:.x.x:.......x...x...x....:xx..x..xx.::x:..... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 144214537 46000018 +3021 chr4 + 190214555 159554574 159554573 159554620 47 TTTACTCACACTCTTATTTCTTTCTTTCCTTTTTTTTGTTTTTTTTG chr4 + 94230402 48471968 48471967 48472014 48471968 48471967 48472014 47 TTTAACCACACTGGTATTTCTTTCTTTCTTTTTTCTTTTTCTTTTTG ....x:......xx..............:.....:..x..:...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 111082606 79131949 +3084 chr4 + 190214555 159581857 159581856 159581896 40 TGAACATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA ..x.........................x.x......... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 155172775 35041780 +3090 chr4 + 190214555 159581857 159581856 159581905 49 TGAACATATATATATATATACACACACACACACACACACACATATATGT chr4 + 94230402 54005685 54005684 54005733 54005685 54005684 54005733 49 TGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGT ......:....:...x....:.:...:.............x.x..x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 105576172 84638383 +3186 chr4 + 190214555 159581860 159581859 159581944 85 ACATATATATATATATACACACACACACACACACACACATATATGTATTTGTCCTGATTT-TACAATTGTATTTTAAGCTTTCTGA chr4 + 94230402 89823929 89823928 89824014 89823929 89823928 89824014 86 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACCTCAATCCCCATGA ..x.......:x...:................x:.:.xx.....:..:x.:.:....x..-..::x..x..::.:..x.:::x... 60M1I25M 58/85 68.2% 86/94230402 0.0% 1/85 1.2% 69757931 NA +3126 chr4 + 190214555 159601235 159601234 159601280 46 AAATTCTTGGTGTGTGTGTGTGTATATATATATATATATTTCTTTT chr4 + 94230402 23522760 23522759 23522805 23522760 23522759 23522805 46 AAATTGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTT .....xxx:..::...........................:..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 136078475 54136080 +3691 chr4 + 190214555 159605430 159605429 159605533 104 CACACACATATATATATATATATATATATATACACATATATATATGTATATATATGTGT-GTGTGTGATGTGTGTGTGTGTGTATATACATATGTATATATATAT chr4 + 94230402 86234535 86234534 86234638 86234535 86234534 86234638 104 CACAGACCTATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTG-TGTATGTGTGTGTGTACACAAACTAGAATACAGGTAT ....x..x.......x........xx.:..x.:...xx.x...x....xx..x....:.-:......-...:............:.:.x.:xx.x...:.x:... 59M1I7M1D37M 75/103 72.8% 104/94230402 0.0% 2/103 1.9% 73370895 NA +3064 chr4 + 190214555 159605434 159605433 159605520 87 CACATATATATATATATATATATATATACACATATATATATGTATATATATGTGTGTGTGTGATGTGTGTGTGTGTGTATATACATA chr4 + 94230402 86234535 86234534 86234621 86234535 86234534 86234621 87 CACAGACCTATATATCTATATATAGCTGTAGATACAGCTTTATCTGTAGCTAAATGTATAATGTGTGTGTATGTGTGTGTGTACACA ....x.:x.......x........xx.::.x...:.xx.x.:.x.:..xx.:x:...:.:xx:.......:.......:.:....:. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 73370899 NA +3431 chr4 + 190214555 159605435 159605434 159605530 96 ACATATATATATATATATATATATATACACATATATATATGTATATATATGTGTGTGTGTGATGTGTGTGTGTGTGTATATACATATGTATATATA chr4 + 94230402 6244962 6244961 6245057 6244962 6244961 6245057 96 ACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACA ....:..x.:.::............:.x.:.......:.:..x:x..:x..:xx:x.x:Xxx.....:x.x.........x.:....:..:.:.:. 96M 62/95 65.3% 96/94230402 0.0% 0/96 0.0% 153360473 36854082 +3392 chr4 + 190214555 159605437 159605436 159605532 96 ATATATATATATATATATATATATACACATATATATATGTATATATATGTGTGTGTGTGATGTGTGTGTGTGTGTATATACATATGTATATATATA chr4 + 94230402 6244962 6244961 6245057 6244962 6244961 6245057 96 ACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACA .:..:..x.:.::..............x.........::::.x:x..:x..:xx:x.x:X:x.....:x.x....:....x....:....:.:.:. 96M 61/95 64.2% 96/94230402 0.0% 0/96 0.0% 153360475 36854080 +3339 chr4 + 190214555 159605499 159605498 159605559 61 TGTGTGTGTGTGTATATACATATGTATATATATATGTGTGTGTATATATATATGTATATAT chr4 + 94230402 86633924 86633923 86633984 86633924 86633923 86633984 61 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCAT ..x.:...:...::..x::......x.:....:...:...........:..x.....::.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 72971575 NA +3002 chr4 + 190214555 159605501 159605500 159605562 62 TGTGTGTGTGTATATACATATGTATATATATATGTGTGTGTATATATATATGTATATATATA chr4 + 94230402 27325492 27325491 27325553 27325492 27325491 27325553 62 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATA ..:..:..xx.:......:x..x.:x..x............:...:.:.:....::..:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 132280009 57934546 +3231 chr4 + 190214555 159641594 159641593 159641654 61 GGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAA chr4 + 94230402 18047931 18047930 18047991 18047931 18047930 18047991 61 GAACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAAA .:.....:...xx..:.x...:............x........xx...:.x..x...:... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 141593663 48620892 +6954 chr4 + 190214555 159734186 159734185 159734470 285 GATTTTACCTGGACTTTTTGACAGACTTGACACACCTTTTCCAGAAACAAGTCATACCTACTTGGTGTTCAGTTTGGTTAGAGCTCTTACAGTCTGTCAGCTACCTTTGTGGAAAAGGAGG-CTATATTTGGAAAGGAGTCGGTAAGCCTCAGCTCTTAATTGTTTTACT-TGCCAAAA-AAGCAGAATTCTGTTGAAGTTTTGACAGCTGTGCCTTGTCATGGAGAAAAATCTTCTATAAGAAAACAAAGGAGCATTTATCTCTACCATACATTATGCTCTAATAAT chr4 + 94230402 23402436 23402435 23402718 23402436 23402435 23402718 283 GAATCCAACAGGAGTATGTGACAACCTCAAAATAACTTTTGCAGTGCTGAG----ATTGGCTTGCTTTTTGGTTCAACTGGAGTTTCTCCAGATAGTCTACTACCTTAGTGGCAACTGAGAACTGCACTTGGAAAATATTCACCAAACTGCAGATTGTTGTTGCTTTTTTCTGCCAAAATAAGTTAACATCTGTTGAAGCCCTGTGAGCTGTACCTTGTCATGCAG-AAAATCCTCTGAAGAAAAAACATTGACCATTAATCTTGCTATTAGATTACTCTCTGATGAT ..x.::.x.x...x.x.x.....:x..::.x.:.x.....x...x:x::..----.::x:....x.x..::...::::.:...:.::.x...x:x...x:.......x....x..xx...:-..::.:.......:x.x..:x:..:.:x...x.:x.x:...:...x:.-........-...:x:.xx..........:::..xx......:..........x..-......:...:x.::....xx.xx..x....x....:xx:xx..x....:x....:..:.. 51M4D66M1I48M1I8M1I46M1D61M 178/280 63.6% 283/94230402 0.0% 8/280 2.9% 136331750 53882805 +3202 chr4 + 190214555 159744448 159744447 159744610 163 GTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTATGTGTATATGTGTATATGTAAATGAATTTTTGCTAACTTAGCAGTTC------AAGGTACTTAATTTTAATACTGTTTGCAGTATAC---TGTATTTGACATAAGTTTTCAGTTCAGCGTTTCATATA-TTATGAGCAAT chr4 + 94230402 79265519 79265518 79265680 79265519 79265518 79265680 162 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCAC--AACACCTCTATATAAATGCACTT--------TGCCTTTTTGAGTGTACAAATGCATTT-CTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTAAT .............::........xxx..:.:..::.::.::....:.:.:.:...::x....x..::x..--.:..x:..------..x.:....--------.:.:x...xx...:...---..:....-x::.....x:....:x.xxxxx..:...:.-.......:... 70M2D8M6I9M8D17M3I7M1D30M1I11M 101/152 66.4% 162/94230402 0.0% 21/152 13.8% 80478929 NA +4707 chr4 + 190214555 159747063 159747062 159747222 160 ACACATGTATATATACATATACATGTATTATATATGTATATATACATATATACATATGTATATAT-TATATGTATACA-TATATATGTATATATACATATAAATTATATATGTATATATGTGTATATATATATAT-----AATTTTTTTTTGAAA--ATAGCTATCCTA chr4 + 94230402 28933005 28933004 28933173 28933005 28933004 28933173 169 ACACGTAAATACATATATGTATATGTATTATAAGTGGAGGTATATATTCATACCTGTTTATACATGTCTTTGTAAGTACTGCAACTGCAAATATTTCTAGGATTtatatatatatataagtatatacatatatTTCTAGGAAGCCCTTTCTAAAACTATATCTACTTTA ....:.:x...:...:..:..:..........x:..x.x:....:..x:....x.:.x....:..-.x.x....x::.-.::.xx..:.x....x:x..x:.x........:......x..:....:......x.-----..x:::...:.:...--...x...:::.. 65M1I12M1I56M5I15M2I12M 109/160 68.1% 169/94230402 0.0% 9/160 5.6% 130814058 59400497 +3113 chr4 + 190214555 159748131 159748130 159748220 90 GCATAGGACTCCTGGGGCTGAGCTGGCAGTGGAGCAAGCCTTAAGTCTGGGTCTGCTGGAGCCAGGCTGATGGTGAGGTGGGCTTGAAGC chr4 + 94230402 40810865 40810864 40810954 40810865 40810864 40810954 90 GCAGGGAACTACTAGGGCTGGGTTGGCTGGAGAGAAGGCTTCAGAGCAGTGAGAGCTTGTGCCATGCTAATGGGAAAGTGAAACTGAAGC ...x:.:...x..:......:.:....x.x:...x.:..:.:.::x.x.x.xxx...x.x....x...:....x:.:...::x:...... 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 118937266 71277289 +3032 chr4 + 190214555 159748964 159748963 159749007 44 TTCTCTTTTTTCTTTTCCCTTCCCTTCCCTTCCCCTTTCCCTTT chr4 + 94230402 51227414 51227413 51227457 51227414 51227413 51227457 44 TCCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTT .:.......::....:..:............:..:...::.... 44M 35/44 79.5% 44/94230402 0.0% 0/44 0.0% 108521550 81693005 +3751 chr4 + 190214555 159748967 159748966 159749021 55 TCTTTTTTCTTTTCCCTTCCCTTCCCTTCCCCTTTCCCTTTCCTTTTCCCTTTCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ..:.....:......:..::......:.....:......x..::...:....... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 85318286 NA +3160 chr4 + 190214555 159749013 159749012 159749067 55 TCCCTTTCCTTTTCCCTTTCCCTTCCCTTTGCCTTTCCCTTCCCTTTTCCCTTCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ...:...::......:...:.:.:....::x....:..:x..:.......:.... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 85318332 NA +3302 chr4 + 190214555 159749031 159749030 159749085 55 TCCCTTCCCTTTGCCTTTCCCTTCCCTTTTCCCTTCCCTTTCTCCTTTCCTCTTC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ...:..:::...x.....::......:.::.........x....:......:.:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 85318350 NA +3144 chr4 + 190214555 159749068 159749067 159749140 73 CTTTCTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCT chr4 + 94230402 83645378 83645377 83645450 83645378 83645377 83645450 73 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTCT .:.x....:.:....:.:.x.......::::...:.::.:...:.:x:...xx.......:.:.:x:...... 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 76103690 NA +3013 chr4 + 190214555 159749144 159749143 159749216 73 CTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCT chr4 + 94230402 83645378 83645377 83645450 83645378 83645377 83645450 73 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTCT .:.x:...:.:....:.:.x.......::::...:.::.:...:.:x:...xx.......:.:.:x:...... 73M 46/73 63.0% 73/94230402 0.0% 0/73 0.0% 76103766 NA +3573 chr4 + 190214555 159749215 159749214 159749318 104 CTTCCCTTTTTCCTTTCTCCTTTCCTCTTCCCTTTTTCTCTTCCCTTCCTCCCTTCCC--TTCCCTTCCCTCCTTTCCTTTCTTCCTTTCCTTTCCTTCCCTTCCC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCT------------TTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ...:x........::.............------------......:.....x:x...--.....:.:x..:..:.x.:..:.::.x...:.x..x.:..:.::.. 28M12D18M2I46M 66/92 71.7% 94/94230402 0.0% 14/92 15.2% 105984680 84229875 +3180 chr4 + 190214555 159749313 159749312 159749357 45 CTTCCCTTCCCTTTCCCTTTCCCTTCCCTTCCCTTTCCTACTTTT chr4 + 94230402 51227415 51227414 51227459 51227415 51227414 51227459 45 CCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTTT .:..::........................:.....::.x:.... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 108521898 81692657 +3353 chr4 + 190214555 159802046 159802045 159802085 40 CTCCCTCTCTCTCTCTCTCTCTCTCACACACACACATACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:....................x............:... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 84553997 NA +3314 chr4 + 190214555 159802048 159802047 159802087 40 CCCTCTCTCTCTCTCTCTCTCTCACACACACACATACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:::..............................:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 84553999 NA +3191 chr4 + 190214555 159802049 159802048 159802089 41 CCTCTCTCTCTCTCTCTCTCTCACACACACACATACACATA chr4 + 94230402 75248048 75248047 75248088 75248048 75248047 75248088 41 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...::.................x..........:.....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 84554001 NA +3185 chr4 + 190214555 159802052 159802051 159802087 36 CTCTCTCTCTCTCTCTCTCACACACACACATACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:....:..... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 147200748 43013807 +18133 chr4 + 190214555 159828014 159828013 159828532 519 ACTTTATCCT-CAAAATATTTTCTTTGGCTTCAAGAGTGAGGGTGCTGTGTTTTACTGCATGAAATCATTCACCAATCCACCTCCTTCCCATCTCCCACCATACCGCAGCCTTGTGGAAGACACCCATGGGGATCGGAACTGTGAAAGTGGTCAGTAAGTAAACAGTAAATGCTATTCATAAATCTCTAAGTCAAGCGTGAA-TCAAACTCACACAGAACACCAGAAAATGAATTTTATTTTAAATCGAAACAGGGATCAGGAGATATAGCTTGGGATTTGGAGATGATTAAATGTAGGATTCAGTTAAGAGGTTTCACCTCTCCAGAAAATATAAGGCAAACAGTCCCATGACTGACCTATAGATCTTTGCTGTATTTGGCATAATAAAATGACAGAGCTGATCGTGTGTTACTTTAACAGGCCTTAGTACGACTTGACTGAAATGTTGAATTCGGAACACAAGCAAGTCAATTTTCGGTTCAGTAGCTATGATCGTTTATTTTGAATTTAAAATTATTT chr4 + 94230402 23423393 23423392 23423871 23423393 23423392 23423871 479 ACTTCAGCCTTCAAAAAATTTGTTTTGACTTCTGAAGTAGGAATGTCATATCATTTTGCA-GTGGTGAGTG----------TTTCTTCCCACTT-----------GCAGAAATGTGGAAATCACT-GCAGGGACCAAGATTGTTGAAGTGTTCAGCAAG-AAAAGCTGTATCCTGTACATAAATCTCTAAGTCAAGTCTGAAAGAAAAGTCATGCAGCAAACCAGAAAATGAATTTCATTTTAAATCAAAACAGCGATCAGCAGATATACCCTGGGATTTAGAAATGATTAACTGTAAGATTCAGTTAAGAAGTTTCACCTCTCAAGAAAATATAAAGCAAACATTCTTATTCATGACCTATAGATCTTTACTGTGTTTGGCATAATAAAATGACTGATCCAATCATGTATTGATGCGGAACATCTTGGAGCATTTTTACTGAGAC------------------ACGAGTCAATGATAGATTTTGTGGTTTGGGTTTTTCTTTTCTGATTAAATAGTGCTT ....:.x...-.....x....x:....:....x::...::.::..:::.:.:x.x:....-.x::.x.x.x----------:.:.......::.-----------....xxx.......:x...:-:::....:.:::.:...x:.....x....:...-...x:x.:x..x..:.x...................:x....-xx...x...::...x.x................:..........:......x......x.......x.:........:..:........x....:.............:............x...........:.......x..::..xxx................:....:...................x..x.::...:...:..:x.x:::x.x::...:.x:.:x:..x.....:.:------------------:.:.......xx.x.:..:x..:.:.xx.:.:x..:x...:x:...x..x.x.::.. 10M1I49M1D10M10D13M11D20M1D33M1D42M1I243M18D57M 340/477 71.3% 479/94230402 0.0% 44/477 9.2% 136404621 53809934 +3309 chr4 + 190214555 159835951 159835950 159836017 67 TGTAGTTCCAGCTATTTGGGAAGCTGAGGCAGGAGAATTACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..............:...::.:......x.xx.x...x:..........:.:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 83802740 NA +3326 chr4 + 190214555 159840769 159840768 159840903 135 CCATTATTGCTGTC-CAACTACATAATAGGGTGCAAATAC--------TTCAAACTCATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATA chr4 + 94230402 39131674 39131673 39131817 39131674 39131673 39131817 144 CCCTTATTGCTGCCATATTTGGAGAGCAGTATTCAGATGCAGATTGCCTTAAATCCCATCAACCCATTCAAGCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA ..x.........:.-:.x:.:x.x.::..x:.x..:..:.--------..x..x.:...xx.:x:..x:.x:::.x...::.::x......x...x.x........x..:..:......x.:x:..:..x...x:.......:. 14M1I25M8I96M 85/135 63.0% 144/94230402 0.0% 9/135 6.7% 120709095 69505460 +3037 chr4 + 190214555 159840814 159840813 159840870 57 CTCATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAT chr4 + 94230402 55694452 55694451 55694508 55694452 55694451 55694508 57 CTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ..::...::...:...:.:........:.....:.x:x::...::........:... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 104146362 86068193 +3281 chr4 + 190214555 159840824 159840823 159840906 83 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:...x.................:.xx:...:x:::..::.....:x:.:::...x...::.:.:...:.:.:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 74006291 NA +3534 chr4 + 190214555 159840826 159840825 159840908 83 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.................:.xx:....x.:..::..:...:x:.:::.:.x...::.:.:...:.:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 74006293 NA +3225 chr4 + 190214555 159840828 159840827 159840925 98 TATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATTCAATGGGTTTTT chr4 + 94230402 85834533 85834532 85834630 85834533 85834532 85834630 98 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTT ...x:..x.....x.................:.xx:.:.:x:::..::.:...:x:.::..:.x...::.:.:...:.:.:..:x:.x:x..:x.... 98M 59/98 60.2% 98/94230402 0.0% 0/98 0.0% 74006295 NA +3665 chr4 + 190214555 159840830 159840829 159840912 83 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x.................:.xx.....x.:..:::.:...:x:..:..:.x...::.:.:...:.:.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 74006297 NA +3008 chr4 + 190214555 159840832 159840831 159840911 80 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 85834533 85834532 85834612 85834533 85834532 85834612 80 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...x::.x.....x.................:.xx:.:.:x:::.:::.:...:x...:..:.x...::.:.:...:.:. 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% 74006299 NA +3435 chr4 + 190214555 159840835 159840834 159840936 102 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATA---------TATATATATTCAATGGGTTTTT----GGGTACAAGTG chr4 + 94230402 79265519 79265518 79265633 79265519 79265518 79265633 115 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATG .............::........xx...:...::..::.:.....:::::.:.x.:....x.:.:.x:.---------......x..x..x.xx.::...----.x......:.. 69M9I22M4I11M 70/102 68.6% 115/94230402 0.0% 13/102 12.7% 80575316 NA +3033 chr4 + 190214555 159840836 159840835 159840893 58 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATA chr4 + 94230402 3414931 3414930 3414988 3414931 3414930 3414988 58 TGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACA ..x.....:x.:......::.....x.......:..:.::xx..:.......:...:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 156425905 33788650 +3102 chr4 + 190214555 159840837 159840836 159840907 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx.....:..::..:::.....:::::::.x.:....x.:.:.x:.:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 80575318 NA +3217 chr4 + 190214555 159840839 159840838 159840911 73 GTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 39131745 39131744 39131817 39131745 39131744 39131817 73 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .:..x...::.::x......x...x.x...:....x.....::.....x..x..::..x...x:.......:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 120709094 69505461 +3210 chr4 + 190214555 159840840 159840839 159840906 67 TGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATAT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:...:...:..:x..:.:...x.....::...:......:.:..:..x.:...::..x.:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 73206916 NA +3235 chr4 + 190214555 159840841 159840840 159840911 71 GTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx.....:..::.::::.....:.:.:::.x.:....x.:.:.x:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 80575322 NA +3670 chr4 + 190214555 159840842 159840841 159840915 74 TGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATTCA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x...................xx.....x.::.:::.:....x...:..:.x...::.:.:...:.:x.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 74006301 NA +3288 chr4 + 190214555 159840846 159840845 159840915 70 TGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATTCA chr4 + 94230402 85834541 85834540 85834610 85834541 85834540 85834610 70 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA .....x.............:.....xx....:x.::.:::...:..x...:..:.x...::.:.:..x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 74006305 NA +3267 chr4 + 190214555 159840862 159840861 159840916 55 TGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATTCAA chr4 + 94230402 83657508 83657507 83657561 83657508 83657507 83657561 54 TGTATG-ATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAA ......-....x...x........:............x.x.x..........:.. 6M1D48M 47/54 87.0% 54/94230402 0.0% 1/54 1.9% 76183354 NA +3189 chr4 + 190214555 159891847 159891846 159891940 94 TTCTTTCCTTCCTCCCCTCCCCTTCCCTTCCGTTTCTTTTCTTTCTTTTTCTTTCTTCCCTTCCCTTCCCTTCTCCTACCTTCCTTCCTCCCTC chr4 + 94230402 33237665 33237664 33237757 33237665 33237664 33237757 93 TTTTCTCCTTTGTCTT-TGGTCTGTTCTTCTGCCTTGTTTCCTTCACTTTTTCACTTCCCTTCCCTTTCCTGTTCTTATTCTGCTTTGTCTCTC ..:.:.....:x..::-.xx:..x::....:.::.:x....:...x:...:.:x.............:...x:..:..:::.x...:x..:... 16M1D77M 59/93 63.4% 93/94230402 0.0% 1/93 1.1% 126654182 63560373 +4341 chr4 + 190214555 159919777 159919776 159919896 120 ATCATTTCATAGT--CCATGC---TCTCTCTCTTTCTCTCTCTCTCTCTATGTATATGTGTATGTATATATGTACATATATAAAACTTGTGTATATGTGTGTGATGTGTGTACATATATATGTAT chr4 + 94230402 60831506 60831505 60831623 60831506 60831505 60831623 118 atgattcaacagttcccatacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAA-------TACATTTATATGGTCTGTGCGCATGTGTGTATAT ..x...:x.:...--....:.---...x.....x.............x.:.:...........::.:.:.:.:...:x.x....-------..:..x.:.:..:.x....::...:.:.:.:... 13M2I6M3I60M7D34M 82/113 72.6% 118/94230402 0.0% 12/113 10.6% 99088271 91126284 +3081 chr4 + 190214555 159929029 159929028 159929079 51 TTTGGTGTTTTTTGTTTGTTTGTTTTTTGTTTTTTTAAAATATTTTTTAAA chr4 + 94230402 10384002 10384001 10384052 10384002 10384001 10384052 51 TTTGTTTTGTTTTGTTTGTTTGTTTTTTGCTGTTTTAAAATAAGCTTCAAA ....x.x.x....................:.x..........xx:..:... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 149545027 40669528 +3339 chr4 + 190214555 159929029 159929028 159929064 36 TTTGGTGTTTTTTGTTTGTTTGTTTTTTGTTTTTTT chr4 + 94230402 28559405 28559404 28559440 28559405 28559404 28559440 36 TTTGGTGTTTTTTGTTTGTTTGTTTTTTGTTTTTTT .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 131369624 58844931 +3224 chr4 + 190214555 159950604 159950603 159950662 59 TATATGTGGTGTGTGTCTGTGAACATATATGTACATACACATATATATACACACATTTA chr4 + 94230402 6083165 6083164 6083223 6083165 6083164 6083223 59 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTA .....:..........x....x:....:.::x.....:.:........x.x:....x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 153867439 36347116 +7993 chr4 + 190214555 159951202 159951201 159951459 258 ATAATGAAGGCCAATGTCATGT--GAAATGATCTGAGAATTCATGCAGTTTATCTCCAAA-TCATGATTTTTCCCTTTATGATTTGATCATGGCTGCATAAAACTCTAGGGGTAGATGGCTGGCATACATAGGTTTATTCTTAATTCATTTTGATGTGGTCAATTTTGTTTAAATGGTATTCAAGTATTAATGTTAAATA---TCCA----GGATACAGACTTTTGATTTTTTGAGT-----TGTATTCAC-------TCAGGAATATGAGGTTCTTTCA chr4 + 94230402 23470282 23470281 23470561 23470282 23470281 23470561 280 ATAATGAAAGTAAATGGCACATAAGAAGTCTTTTTTTAGTTCTCACAGTTCATTTCTGAAGTTGAGATCTTTCCTTTTATGGCTTGATTACAACCTGCTAAGATTCCTGGGATAGAATTCTAACATAAGTAGGTTTGACCTTAATATATTCAAACCTCATCAATTTTGCTTAAATGATATTCAAGAATGAATGTTAACTATAGTCCGTTATAAGTATAGGCTTTGGATTTTTATAATCACTGTAGAATCACTGTGGGATAAGGAAGATGAGATTCTTTTA ........:.:x....x..::.--...:.xx.:.xxx.:...x::.....:..:..::..-.::x...:.....:......::.....:.:::.:xxx...:.:..:x...:....xxx..::....x:.......:x:......x:...:x:.:x.x:.........:.......:........x..x........x..---...:----:::..:..:....x.......xx.:.-----.:x.x....-------.x.....x.....:......:. 22M2I36M1I139M3I4M4I26M5I9M7I22M 176/258 68.2% 280/94230402 0.0% 22/258 8.5% 136480920 53733635 +3309 chr4 + 190214555 159977702 159977701 159977841 140 TGCAGGGAGAGA--GAGAGAGAGGAAAGAG----------------AGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAAAGGAGA chr4 + 94230402 61325939 61325938 61326096 61325939 61325938 61326096 158 TGCAGGGAGAAGCCGAGGAGTGGAAAAGAGCTTTCATTGGCAATTAAGAGAGAAAGAAGTCAAGGGGACAGAGGAGACAGAGGGGAGAAAGTAATATGTTAAGTAAATAAACATTGAGATAGATAAGAAAGTGAGTGATAAGAAAGAAATAGATAAAA ..........::--...:::x:.:......----------------.....:.:...:.xx.::.:..x......:.x....:.:.::.::x:.x.x:xx:..x:.:x...x.xx....x...x.:.....x...x..x.:......:.x.:.x:.:. 12M2I16M16I112M 87/140 62.1% 158/94230402 0.0% 18/140 12.9% 98651763 91562792 +3344 chr4 + 190214555 159977720 159977719 159977851 132 GAGGAAAGAGAGAGAAAG---AGAGGAAAGAGAGAGAGAGGAAAGAGAGAGAAAG--AGAGGAAAGA-GAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAAAGGAGAGAGAGAGAGA chr4 + 94230402 69368673 69368672 69368810 69368673 69368672 69368810 138 GGGAAAAGAAAGGGAAAGGTGACACGGCAGGGTTATAGATTAAAGGCTTGTAAAGCTGGATGAATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAA .:.:.....:..:.....---.x.x.:x..:.xx.x...xx....:xxx:x....--:..x...x..-..:.:....:........::..:.:.::...x.:x:...:..:......:.x:.x:x..:..x.:...:. 18M3I34M2I10M1I70M 84/132 63.6% 138/94230402 0.0% 6/132 4.5% 90609047 NA +3006 chr4 + 190214555 159977735 159977734 159977795 61 AAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ..:..:::...:.:..:.:.:....x......:.:......:..x:.::.:.x.:...... 61M 41/61 67.2% 61/94230402 0.0% 0/61 0.0% 97502021 92712534 +3463 chr4 + 190214555 159977753 159977752 159977846 94 AGAGGAAAGAGAGAGAAA--GAGAGGAAAGA-------GAGAGAGAGGAAAGAG--AGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAAAGGAGAGAGAG chr4 + 94230402 15855376 15855375 15855480 15855376 15855375 15855480 105 AGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ....x............:--..x.:......-------:..xx.::.......x--.....:......:.:.:....::.:....x..::.::..x..:.:..:. 18M2I11M7I16M2I49M 68/94 72.3% 105/94230402 0.0% 11/94 11.7% 144122377 46092178 +3006 chr4 + 190214555 159977769 159977768 159977829 61 AAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ..:..:::...:.:..:.:.:....x......:.:......:..x:.::.:.x.:...... 61M 41/61 67.2% 61/94230402 0.0% 0/61 0.0% 97502055 92712500 +3585 chr4 + 190214555 159977780 159977779 159977976 197 GAGAGAGAGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAAAGGAGAGAGAGAGAGAGAGAAGAGA-GAGGGAGAGGAAAGAGAGAGAGAGGAAAAAGAGAGGGAGAGTGTTAGATATGAGTTCTAAATTTCTTTTCAAAGAATCAATATGTCAGTATGTTCAATTCTTCGCCTTCTACTTTT chr4 + 94230402 7358262 7358261 7358438 7358262 7358261 7358438 177 GAGATGGGGAGAAAAGAGA---------AGGGACTTGAGAGAGAGCAAGGAGAGAAGAGAGAGAAAAATGGAGAGGACCTAGGAAGGATTAGAATTAGAATGCAGACAGAAGAGGAAGGAAATGAATAGATCTG---TCCACACTTTTCCTT------CCAACTTGCTAAAGTTTTCAA---TTTACCTTCTGTTCCT ....x:.:...:.......---------...:.xxx.........x..:.......::......:.:.x:.....:.xxx.-..:...xx:...xx...:x.x:::x.:..:::..:...:.xx:x.....x..---..:.x.:..:.::.:------:...:x..::.:x:.x.....---..::......::.::. 19M9D53M1I52M3D15M6D21M3D16M 110/176 62.5% 177/94230402 0.0% 22/176 12.5% 152619518 37595037 +4025 chr4 + 190214555 159977787 159977786 159977891 105 AGAGGAAAGAGAGAGAAAGAGAGGAAAGAGAGAGAGAGGAAAGAGAGAAAGGAGAGAGAGAGAGAGAGAAGAGAGAGGGAGAGGAAAGAGAGAGAGAGGAAAAAG chr4 + 94230402 15855376 15855375 15855479 15855376 15855375 15855479 104 AGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAG-GAAAGAACGAAAAAGG ....x............:x:..x:.:.:...xxx:..x:.:xx.::.:..:..xxx................:.....:.:....x..-..:...:x.:....:. 88M1D16M 71/104 68.3% 104/94230402 0.0% 1/104 1.0% 144122411 46092144 +3204 chr4 + 190214555 159977848 159977847 159977916 69 GAGAGAGAAGAGAGAGGGAGAGGAAAGAGAGAGAGAGGAAAAAGAGAGGGAGAGTGTTAGATATGAGTT chr4 + 94230402 77211991 77211990 77212059 77211991 77211990 77212059 69 GAGACAAATAGGAAAGGGAAAGAAAATGGAGAGAGGGGAGAGAGAGAGGAATAGAATGGGAGAAGAGTT ....x.:.x::..:.....:..:...x:.......:...:.:.......:.x..x:.x:..x.x..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 82765857 NA +3131 chr4 + 190214555 159980737 159980736 159980798 62 AGCAAGAGAGAAAACCTAAAGACAAGCTATTTTGTTGTAGATTGTCAAAAAAAAAAAAAAAA chr4 + 94230402 36836163 36836162 36836224 36836163 36836162 36836224 62 AGCAAGGATGGCATGCTAAAGGTGAATTATTCTGTGGTGGTTTGTCGAAAAAAAAAAAAAAA ......::x.:x.xx......:::.::....:...x..:.x.....:............... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 123144574 67069981 +8881 chr4 + 190214555 159981143 159981142 159981391 249 TGACTCATGGT-----GTGCCATATTAGTTAAATTAAACATCAAACATCTGTCTAACTTTAAGATTCCAACATGAGTATGTTGGCAGTCTCAGTAAAACTGGGGCTGTTAAAGGCCTTCAATCAGTCAAAGGGATAGAGCTGCAGTAATGGCAAACTCAGCAAGCAATTACATCAAAGGATTTAAACTCTATTTCAGTAATGCCTTCTGGATAATGACATTGATCTCAGCACTCCCCTTGCAGATTTCCTGGTA chr4 + 94230402 23475784 23475783 23476025 23475784 23475783 23476025 242 TGATTCTTGGTTGAATGTGACGTCTCAGTTAAGTCAAAAACAAAATATCT-----ACCATGAGACT------GGGATAAATTTAGAGTCTTAGTAAAACTTGAGTAGCTAATGGACTTCAATCCATCAA-GAGCTCGACTGGTGCTAATGGCAATCTCACTGAGTAATTACATCCAGGGGGTTAAAATCTATTTCAGTGATGCCTTCAGGTTAATGGAATTGATCTTGACCCTTTTCTTGCAGATATCCCTGCA ...:..x....-----...x.:.x.:......:.:...x.:x...:....-----..:x.:...:.------x.::..x:..x:x.....:.........x.:.:x.:...x..x........x:....-.:.x.x..x:x.::x.........x....x::..:.........x.:..:x.....x...........:........x..x.....:x........:::.x..:::.........x...:x.:. 11M5I34M5D11M6D57M1D124M 168/237 70.9% 242/94230402 0.0% 17/237 7.2% 136505359 53709196 +3075 chr4 + 190214555 160025956 160025955 160026007 52 TGTATATATATACATACACACACACACACACACACAGACACACATACAAAAA chr4 + 94230402 74671076 74671075 74671127 74671076 74671075 74671127 52 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAA ............:...:...............x.x.:.x.:.xx..x..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 85354880 NA +3505 chr4 + 190214555 160031088 160031087 160031171 84 ACAGGGTGGTGCACACCTGTAGTCCCAGCTACTCCGGAGGCTAGGGTGGGAGGATCACTTGAATCTGGTAGTTCTAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:.........:--......:.........:x::.....::.x:xx.x.:.x........:.::.x..:.:.:.....:.. 15M2D67M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 83997892 NA +3096 chr4 + 190214555 160031514 160031513 160031583 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 83998317 NA +10202 chr4 + 190214555 160057669 160057668 160058118 450 TCACTATGTGGAGTTATAATAAATGATTGGTAATATGCTTACTAATGACTTGCAAAATTTCTTTTTGGTAGAGCAGAAATGG-----TGACTAATTTATTTAGCTTCTGCTACTATAGATTAGCCTATTAATTTATTCAGTTGTTAAGATATATTT-TAATTGTTTTAGTTTCCTAAAACAATGACAACAACAACAACAAACATGTTCTATATGAAGGTTATAATGAACTTACTAATAGGTTATTGACTACTTATTCTTTTCATTCATCTTCTGCTGGGAAGGTATTGATTACTGTCCTTTGAATCATTCTCAAATTGCTCCACATCTACCTAAAATGGTTTTTATGATGACTTCATATTACTTTCATTTTCAATTGTCTATAACAGGACTCAGTAGAGAATAAAGAATGGTTCTATTTTTTTAAAAATAGAAAATGACAATATGCAAAGATGTTT chr4 + 94230402 23485585 23485584 23485983 23485585 23485584 23485983 399 TCACAATGAGGAGTT------------TTGTAATGGGTCTGATAATGAGTTACTAACTTTTTTTTTTGTGCAGTACAAGTGAAGACATGGCTAATTTATATAACTTATGTAACTTCAGATTAGCATGTACATTCATTTAGTTGTTAAAATTCACTTAGAATTGTTTTAGCCTCCTAAAATAAGG-------------CAAGT---TTCTTTTCCAAGGTTATGATGGACATGCTAATGGAATATTGACTACTGTTTCTTATCATCCATC-TCTGGTGGAAAGGTGTTCATTACTTT--------TCACTTAAAAAATTCCCCCCACT------------TTTTTATTAGGAATTCATTGGATTTGCAGTTGAAGACGGTCCCGGCAATAGCCAGTGTTTAAGaaa-------tttatttactttatattattaaataGCAAT-TTCAAGGATCCTT ....x...x......------------.x.....:x.::.:x......x..:.x..x...:.....x..:x..:.x..:..:-----..:.........x..:...x..:x...x:........x.:.xx...:...:.........:..x:.:..-x...........::........:..x.-------------...::---....x.x:x........:...:..x.:.....:.:x...........xx.....x....:....-....x...:.....:..x......x.--------...:.:xx...x.x.:..x..::------------.......x.x..x.....xxx.:..x..x..xx.:x:.x::x:::..:x.x:....:xxx..x...-------.:.....x:..x.x.x..xx....::....-.x...:...x:.. 15M12D55M5I69M1I27M13D5M3D64M1D26M8D23M12D66M7D30M1D13M 273/393 69.5% 399/94230402 0.0% 63/393 16.0% 136572084 53642471 +5881 chr4 + 190214555 160070923 160070922 160071288 366 AAGTCTGTTTTATCACAAAGGAATAGATTGGAAAAAC-----------------CTGAATACATTACCTGTCCAGGTGGGCAATAAATAAGATTAACTTCTTATACAAAATGTATTTTCTATCAAAAAAGGTAGGTTTTTTTTACTTGACTTATTTACGTTCATTTTCTTTACGGAGTATGCCATCTGTTACTCTGACATGTTATATAGTAGAAGGGCATTCTGGA-TGCTGCTCTATGCC------------------------CCAATAAGCATTCTTTTCATTATTCACAAAGTCAAAATTGAGAATACATCACCTGTACT-------ATCACATGCCTTTCTCAAAAGTC-----------AACCATTTGAAGAGTAGCCCCAAATGAGAATTTTTTTTGATGTAAAATATCTGAAAAAGAT chr4 + 94230402 23490487 23490486 23490893 23490487 23490486 23490893 407 AATTTTCTTTCATTTCAAAGGTGTATGCTGGGAAAATAAACCAGTTTCAAATAATTGTGTAGTATGGCTTTCCATGAAGGCAATAAATGAACTGAACTT---GTACAAGGAATCTTTTCT-TAGCAGAATGTTG--TGTTTCTACCTGACTCCTTTAAATTTATTTTCTTTGCTGAGTAGGCCATCCATTATTTTGACATGTTTTATGGTGAGTTAGAATCCTCAATTGCTTCTGCATACCaaaaaaaaaaaaaaaaaaaaaaataaaaaaaGAGGTTTCTTCAGTTTTCACA----------TAAAAAAACAAC-CCTATCCTCAAAAACGTCAGAGGCCAT--TTAAATGTCATTGCTTGAGAAAACACTCTGAAAATGCTCCAAAATGAGCTTTTCTGGAGATGTCAACTCTTGGAAAAAAAT ..x.:.x...:..:x......x:..x::...:....:-----------------:..x:..xxx.:x..x....x.x:..........:.:x.x.....---:.....::x:.x......-.x:x.:..x..x.--.x...:...:.....:x....x:..:.........:.x.....x......::...:.:.........x...:..:::xx:.x..:..x:.-....x..x:..:..------------------------xx..x...x:x.:.:....x.x......----------.:.:..x...x.-...:.x..-------:...x.x...x.--.:...x...-----------..x..:.:x:.:.:.:x:..x.......xx...:.xxx.....x..x.x.:x......:.. 37M17I45M3D18M1D13M2D90M1I14M24I28M10D12M1D8M7I12M2D9M11I61M 230/347 66.3% 407/94230402 0.0% 79/347 22.8% 136580436 53634119 +3285 chr4 + 190214555 160073308 160073307 160073379 72 GCACCTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGAATGGCGTGAACCCAGAAGGTGGAGGTCGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::...:....x.xx.x...xx:.x............x.xx:..::.:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 84040102 NA +11310 chr4 + 190214555 160081781 160081780 160082066 286 CATACATATGAGGCTTTTGAGTTTCCCTGCAGGATAAATGAATCTATTAGTAACTCATTTTGTTCTGTTACAGACAATTTAACATTTTTAACATTCAGTTGATATGCTGTGTTAGAATAAATCTAGCCGAATAAGTAGTGCAGATTGCTTCTTTATGACTTATTTGTTGCAGGTTTTATTGATCCTCTCTTCTTGACCTCAATGAAAACCAAAGAAAATATTAAGAAACAAGTCAAAAAGGAGATATAAAAGTC---------AAAAAGTAACATACTTATTGGCCTG-GAGAATT chr4 + 94230402 23494686 23494685 23494977 23494686 23494685 23494977 292 CATTCATATATAGTTTCCAACTGTCCAGACAGAATAAATGAGACT--TAGTAATTTGAATTGTTTTGTTACAGACAATTTAACGCTTTTAGCATTCTGTTCATACATGGAGTTATTGTAAATGTGATCCAATAAATAGTACAGATTGCTTCTTTATGGCTTGTTTGCTCCAGGTTTTACTGATCCT-TATACTTGACCTCGAAGCGTAAC-AGGAAACTATAAGGAAGAACATTAAAAAGGAGAAATGAAAATTTTTAAATTGAACAGGCATCAAATCTCTTAGCCTGTGAGAGTT ...x.....:x:.:..:::.x.x...xx:...:........:x..--......:.::xx.....:..................::.....:.....x...x...:::x.x....xx:.....x.:::.x.....:....:.................:...:....:.x.........:.......-.x.x.........:.x.x:x.x.-.:....x...x.:...:x.x:.:..........x..:...:.:---------..x.:.:.x..x.::.x..:.....-....:.. 45M2D139M1D23M1D43M9I25M1I7M 204/282 72.3% 292/94230402 0.0% 14/282 5.0% 136587095 53627460 +3233 chr4 + 190214555 160095398 160095397 160095456 59 AAATATATATGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATT chr4 + 94230402 6857608 6857607 6857666 6857608 6857607 6857666 59 AAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTT .........:..::...::...:x:.........x...........x..x:x....x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 153237790 36976765 +3048 chr4 + 190214555 160113339 160113338 160113391 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATACATATATATATACAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x.x......:.:......:.....x.:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 158618339 31596216 +3062 chr4 + 190214555 160113341 160113340 160113391 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATACATATATATATACAT chr4 + 94230402 90030076 90030075 90030126 90030076 90030075 90030126 51 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ...x.......xxx:...::..............:...:.........:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 70083265 NA +3120 chr4 + 190214555 160113341 160113340 160113393 53 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATACATATATATATACATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x........:.::.:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 158618341 31596214 +3203 chr4 + 190214555 160167084 160167083 160167132 49 ATGTAAGATAATTTTTTTTTTTTTTTTTTTTTTGTACAGGGTAGGGAAG chr4 + 94230402 63557654 63557653 63557702 63557654 63557653 63557702 49 ATGTAAGACAAATTTTTTCTTTTTTTTTTTTTTCTCCAGGGAAGAGGAG ........:..x......:..............x.x.....x..:.:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 96609430 93605125 +3100 chr4 + 190214555 160170318 160170317 160170367 50 TAGTTAGAAAAGCATCTGTATGCCAAAAAAAAAAAAAAAATCACAGAAAT chr4 + 94230402 32788343 32788342 32788392 32788343 32788342 32788392 50 TAGTTAAGCAAGTATCTGTTGTCCAAAAAGAAAAATAAAATCACAGAAAT ......::x...:......xxx.......:.....x.............. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 127381975 62832580 +3051 chr4 + 190214555 160173418 160173417 160173479 62 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGTGTGTTGGG chr4 + 94230402 13734909 13734908 13734970 13734909 13734908 13734970 62 GTGGGCGTGTGTGTCTGTACTGCTGGGTGTGTGTGCATATCTGTTTGTGTATATATGGTGAG ...x.:........x...::xxx..x.........::.:.x...........:.:..x..:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 146438509 43776046 +3631 chr4 + 190214555 160177085 160177084 160177163 79 TATATATATATACACGCACACATATATATCTAGACACACACATACACATATCTGTGCATGTGTGTGTGTGTGTGTATCC chr4 + 94230402 32744959 32744958 32745032 32744959 32744958 32745032 74 TATCTATCTATACATCTACAGA-----ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATATTC ...x...x......:x:...x.-----..x..:.:...:.........:.xx.............:...:...:...:. 22M5D52M 57/74 77.0% 74/94230402 0.0% 5/74 6.8% 127432126 62782429 +3106 chr4 + 190214555 160185172 160185171 160185221 50 TGATCTAGAATATTCCAACCCCCACCCCCCCGCTTTTTTTTTTTTTTTTT chr4 + 94230402 39752754 39752753 39752803 39752754 39752753 39752803 50 TGAATAAAGATATTTCCACTCCCTCCCCCCCGCTTTTTTTTTTTTTCTTT ...x:x.::.....:.x..:...x......................:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 120432418 69782137 +3098 chr4 + 190214555 160196459 160196458 160196512 54 TTCTTTCTTTCTTTCTTTCCTTTTTTTTTTTTTTTGAGACAAAGTCTCTCTTTG chr4 + 94230402 90152632 90152631 90152685 90152632 90152631 90152685 54 TTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG .....:....::.:.......x.............x...x:..:.:..x..x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 70043827 NA +8749 chr4 + 190214555 160197387 160197386 160197672 286 TAGAAATTGACATTCAACTTTCTAAAAATTAATGTAACATTTATTAGAAATAAACTTTTTATTTAGAATTTGGTATCCAAAGATAAGTATGATATGGCTTAAGTGGTAATTTGGAAAAAATGGGTCATGTAATTACAGGGTCATTTTCATTTTAT-CATTTTGAGGTTTACCTGTATTATTTATAGGATATATTTAACATGATTTATTACATGATTATACAGATTACATTTAACAAGGCAATAAAATCATACAATTCAACACTAAGGTGACCTTCACATGAACAGTG chr4 + 94230402 23506937 23506936 23507211 23506937 23506936 23507211 275 TAAGAAGTGAAATTTAATTAGCTTAAAATTAATGGACCGTTTATTAGAGATTCATATCTT-CATAGTTTTTCGTATTGAAATATT-------TGTGGTTAAAAAAAGAA----AAGAAAATAAATCATACTATTTTCCAAAGATTTTGGTTTTACGTATTCTGAGAATTATAAGTCTTATTTATAGGATACATTCCCATTGATTTATTAAGTGATTCTACAAATAATATCTTACAGAGCAACAAAATCATACAGTTTATCACTAAGGTGACCTTCCTCTGAAATGTG ..::..x...x...:..:.xx..x..........x.x.:.........:..xx.:x.:..-:x...xx...x....:x...x..x-------.:...:.x..:x::x..----:.:.....:::....::x...x:xx::xx.....x:.....:-:...:....:x...:xx..x..............:...:xxxx..........x:.....x....:..x.:..:.x...::....:...........:..:.x................x:x....xx... 60M1D24M7D17M4D42M1I131M 187/274 68.2% 275/94230402 0.0% 13/274 4.7% 136690450 53524105 +3488 chr4 + 190214555 160204733 160204732 160204876 144 ATCTCGGCTCACTGCAAGC-TCCGCCTCCTAATGTGGGTATTATTAATGATTACT--ATTTTAGAGATGAACAAACTGAGGCACAGATAAATTAGGTAACTTACCCAAGGTTACAT--AGCTGGGAGGTGGTAGAACCAG--ACAGGATTC chr4 + 94230402 83845946 83845945 83846091 83845946 83845945 83846091 146 ACCTCAGCTTAGTTGAAGCATCTGGTTCTCTGTG-AAGTTTTAATTTTTTTTACTCAATTCTACAGCTGTACAAACTGAAGCTCAAAGAAACTAAGCGTCTTGCCCAAGGTCATATTGAGCT----GGTGGTTGAGCCAGGAATAGAACTC .:...:...:.x.xx....-..:.x:..::x:..-::..x...x.xx.xx.....--...:..x..x..x.........:..x..:.x...:..:.::x...:........:.:..--....----......x..:....--.:..:.:.. 19M1I14M1D20M2I59M2I4M4D14M2I9M 97/139 69.8% 146/94230402 0.0% 12/139 8.6% 76358787 NA +3590 chr4 + 190214555 160204762 160204761 160204851 90 AATGTGGGTATTATTAATGATTACTATTTTAGAGATGAACAAACTGAGGCACAGATAAATTAGGTAACTTACCCAAGGTTACATAGCTGG chr4 + 94230402 82283105 82283104 82283192 82283105 82283104 82283192 88 AAGGTTAGCATTGT--ATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAG ..x..x:.:...:.--..x..x.::....:.x.x...::x......:.:.....::.:....:..:...x...:.....:...:..:.:. 14M2D74M 60/88 68.2% 88/94230402 0.0% 2/88 2.3% 77921657 NA +8402 chr4 + 190214555 160208832 160208831 160209220 389 TTTTATGTATAACACAGGTGGATACATCCATCTTTTGAAAAGTCTATTTTGCTAAAAGAATGGTAAACACTTGTATTTCTGCTTCTATTAGCTTTAAAAGGAATAAAGCAAAGGAGCACAATTGTTTCTTTTTTTCCCA---TTTAATTCAGTGTGGCTGTCATGGCTATCAACCAGCCATGCTACTGTTGCAGTTTTACTACGTAGACTATTTCTTGATTTATTAGCTTTCAGAATCAAGCTCTGCTGTGCTGTTACATTCTTTGGCTTACACAGCACCTGTGTAGACCTCTGGTGATATTGTTTTATTTATTATTCATGCAACATTAGAGGACAAAAGGGATTCAAGCTGGTTCAGAGGTCATCAGCACCCTTTAAGGTCAAGCTATTTG chr4 + 94230402 23513656 23513655 23514004 23513656 23513655 23514004 349 TCTAATGCATAAGATATTTGAATA-------------AAACATATGTTTTGGTAAAATGACAATAAACAC--ATTATTCTGCTAGCAGAAATCATAAAAGGACTAGAACAAATGAGATGCATTCTTTTTTTTTTCCCCCAGTGTTAATTTAATGTTACTGTCATGATGATCTCCTAGTCAAACATCTACTATGGTTTTACGGTACAGACTGTTTCTGGATTTATTTCTTTTCATATTCTACTTGTGCTGTGTTTTTACATTATTTGTCTTGTAAAACGCTTCCAAAGAGCTGCAGTTATGAAGCAGTATTTCTAATT---------TTCTAGGGTAAGTGGGA-------------------AACCATAACCCTTTCAGTTCAAGCAGTTTG .:.x...:....x.:.xx..:...-------------...x:.x.:.....x.....x:.:::.......--:.xx.......xx:.xx.:::x........x..:.:....x...xxxx...x...:......:...x---x......:.:...x:........::x...xx.:..:..x:.xx..::.:::.......x::::.....:.....x........xx:.....x.x..x.x:.x.......:.x.......x....x...::.x.:.:.:.x::x...x..x::..x..:xx.:xx.....x.x...---------..xx...::..:x....-------------------x.:..xx.......x..x......x:.... 24M13D33M2D67M3I175M9D17M19D30M 226/346 65.3% 349/94230402 0.0% 46/346 13.3% 136695176 53519379 +3019 chr4 + 190214555 160222346 160222345 160222393 48 TTCTCTCTCTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTCT chr4 + 94230402 56907980 56907979 56908027 56907980 56907979 56908027 48 TTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTT .........................:....x:.xx..:.:...x..:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 103314366 86900189 +3125 chr4 + 190214555 160227521 160227520 160227563 43 AGAATATATATATATATATATTTTTTTTTTTTTTCAAAGTAGT chr4 + 94230402 90730614 90730613 90730656 90730614 90730613 90730656 43 AGAATACATATATGCATACATTTTTTTTTTTTTTCAAATTGGT ......:......::...:...................x.:.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 69496907 NA +7617 chr4 + 190214555 160236147 160236146 160236510 364 CTGTGAATGGAAGGTAACTGGTAACAGCAAATGTTCTGCTCAAAATCCTCATTCACATGGCAGCATTCTGAA--GAAAATGGAATTTGTAACTGCAGATTTTCTGAAATACAATCACATCCAAACAGCAGGATTTCTAAACAGAAGGTGCCTTATAACTATGTTCTAAAATTAAACCTCATTTAAACTACATTCATTCTAAATGGAAAATGTACTGTAGTTGT----------TTTCAACATTAAAGTCAAATTCAAATCATTGTTATCCTAAGAGCTAAGTAGCTTAAATAACTTCTGCCGTGTAA-----TGAAGATTAGCGTGTATTTCATATTAGGTTTGCAGAGTAATTTGGGGGAAAATGTTTTCTTTTTGCACT chr4 + 94230402 23522252 23522251 23522609 23522252 23522251 23522609 358 CTGTGAACAGGAGTTGACAGAACATAGTAACCATTC-ACTTAAATCTTTAATTTCAGAGGCAATATGTTAGATAAAAAAGGGGATTTGTAGCTGCAGGGTTTTGGTTAGGAAATAGTATTTAAAAAATAGCTCTTCTAG------------TTGTGACT-----CAAAAATTAAGACT-ATTTAGAGTACATTCATACTAAATGGAAAAGGTCTTGTAGTTGCAATTGTGCTGTTGCA----TAAATTCACATCCAAATTACTGTTATTCTGATTGTAAAGTACTTTCTGTAACTGCAGTTGTATAATAAAGTGAAAATTAGTATACTGCACTTATGAGGCTCTTACTGTAATTGTAAAGAAAAACGACTTTCCTTGCATT .......::.:..x.:..x.:xx.:..:..x::...-:..:...x:::.x...:xx:x....::..x:.::.--:....x..:.......:......:x...:x.xx.x:x...x::..::...x.::..xx:.....:------------..:.:...-----.x........:x..-.....:.x.........x............x..x:........:----------..x..----....x...x..:.....:.:......:..:.xx.:x.....x:..xx:.....x.x.::..:...-----....:.....::.::xx:x.x...x...:.:x:.xx......xx:::.....xxxx:.:.::.....:. 36M1D35M2I65M12D8M5D14M1D44M10I5M4D65M5I69M 219/341 64.2% 358/94230402 0.0% 40/341 11.7% 136713895 53500660 +3175 chr4 + 190214555 160253328 160253327 160253384 57 TTTTGTTTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCTTTCCTTCTTTCCC chr4 + 94230402 7218319 7218318 7218375 7218319 7218318 7218375 57 TTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCC ....x......:..:x.:.:....:.......:...::.....:::.x....:.:.. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 153035009 37179546 +3000 chr4 + 190214555 160259452 160259451 160259528 77 AGGTACAATATTTTGTCTTTTGCTAGGTAAACAATTTTTTCTTTTTTCCTTTTTTCTTTCTTTCTTTTTTTTTTTGA chr4 + 94230402 78112856 78112855 78112932 78112856 78112855 78112932 77 AGATACATTTTTTTTTGTGTTGCTCAAAAGACAATTTTTCATTTTTCTTCCTTTCCCTCCTTCCTTTCCTTTGCTAA ..:....x.x....x.x.x.....x::x.:.........:x.....:::::...:.:.:...:....::...x:.:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 82146596 NA +3700 chr4 + 190214555 160263350 160263349 160263478 129 TCATCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAGGATCTGAAATAGATATGTAATATAT-----------------------------ATATAGATCTCTCTCTCTCTC---------TATATATATATATCATGTTTTATGTATTACATA chr4 + 94230402 4618359 4618358 4618515 4618359 4618358 4618515 157 TTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGT-------ATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatat-atgtgtta--gattacata .:........::..............x:x...::......x.x.......x-------........:.x......-----------------------------...x:...:.x...x.x::..---------.............-....x...--x........ 51M7D17M29I21M9I13M1D8M2D9M 96/119 80.7% 157/94230402 0.0% 48/119 40.3% 155644991 34569564 +3292 chr4 + 190214555 160264719 160264718 160264814 96 AATTTAAATATATATATATATATATATATATATATATATATATATATATATATATATGTGCGTGTGTATGTGAGTTTACATACCTAATAAGTGAAA chr4 + 94230402 22600187 22600186 22600281 22600187 22600186 22600281 95 AATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGAT-AGTGAAA ....:.::x.x.:.:.:....x:.:..::.x.:.:..::...:.x.x....:.....x..:........:..x:.x:..:..xx.:..-....... 88M1D7M 62/95 65.3% 95/94230402 0.0% 1/95 1.1% 137664532 52550023 +3056 chr4 + 190214555 160331635 160331634 160331697 63 GCGACGGAGCGAGACTACGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA ..:.x.....:....x:.x.........::.:..............:x.x.:..:x.x..x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 71948927 NA +22712 chr4 + 190214555 160333145 160333144 160333672 528 TTAATGTTTTGAATTTCC-AAATTTTATTTTTTT---TCAAATTTTATGTTTCA--------AACTCCAGTCAAATCTTTTGTTTTAAATATG--AGTGTGGCTTAATAGCTAATCAACTTAAATTTGAACAG--TCCTCCTGTCTGTATTAAAAGAGTGTTCTCAATTACATACTGAATTAAATAAGAGATAGGAAGATT-CTGAGAACTCAAAATTTATAGTTTCATTACTCTGAAAAATTAAATCTAAAAATGTGTAAAAATCCACATTAATCATTCAGTTTCAGCACATAAATGTAAATGGCTTGTAACTAAAATTCACTTCAGACTGTAAGTAATAATTACCCAGAAACACTGCATAAGCCTCATTAGAG-CCTACATTTAATACAAGTGAGGAGCACAAGGGACCTGCACAAATCTGCACAAATAAGTGGATTCTAGTATTTAATCAGCATAAAATAGTCACTATAAAGCTTCATTAAGAAGCATTTTCAAAACAGAAATCAGAGAAGATGATCTTG--AAAATAAAATTTGATGTTGAAGT chr4 + 94230402 23556318 23556317 23556844 23556318 23556317 23556844 527 TTGACCTTGTGAAATTCTGAAATTTTATTTCATTACCTTGAAAGCTACGATTTAGCATAGTGAACATCAGGCAA-TCTGTAGTACTTAATCTACTAGCTCAGCAGAACACCAAATTAATTCAAATTTGAAAAAAACCTCTCCATCTGTAGCAAAAGCATGTTCTCAATTACATACTGAATTAAATAAGAGGTAGAAATATTTCTGAAAGCTTGAAATTTATAGTTTCATTAGACTGAAAAACTAAACCTAAAAATGTGTAAAAATCTACATTAATCATTTAGGTTTAGCAC----------ATGGCTTGGAACTGAGCTTCATTTCAAACTGTAAGTAATAATTACCTAGCGACACCTCATGAGCTTCATTAGAACCCTGCTTTTAATAAAAGTGGGGAACACTAGGG----------ATCTGCACAAATAAGAAGATTACGGTATTTAATCAGAACAAAATGGTAATGATAAAGCTTTATTATATAGCATTTCCAAATATAAAATCAAGGAAGATTATATAAGTGGAATAAAAATTCATTTTCAAGT ..:.:x..x....x...:-...........:x..---.::..xx:..:.x..:.--------...x:...x...-...x.x..x:.x...x.:--..:x::..xx..:.x.x...:..:.:.........x.:--:.:::.::......x:.....x:................................:...:..x...-....:.:..::..................xx........:....:...................:............:..x..:.....----------........x....:.:x....:....:...................:..x:....:x...:...:........:-...:.x.......x.....:...:...x....----------...............x:....x::............x.:.....:..x.:x.........:....x:x.......:....xxx:......::......x..x.x:--::.......x..x..x..x.... 18M1I15M3I17M8I12M1D18M2I38M2I66M1I89M10D74M1I32M10D105M2I23M 390/507 76.9% 527/94230402 0.0% 41/507 8.1% 136776827 53437728 +3320 chr4 + 190214555 160350523 160350522 160350624 102 ATACATATATACATATACATGTATATATGTATATATATATACATGTATACACATGTATACATATACATACACTATATGTATATATATGTATATATACATATA chr4 + 94230402 35034550 35034549 35034651 35034550 35034549 35034651 102 ATACCTTTGAACAAATGTTTGTGTTCATGTGTATGTACATAGATGTATACATGCGTATAAAGAAACCTGCCTCATATACCCATCGTTGTATATCTTAATATA ....x.x.:x...x..::x...:.x:....:...:..:...x.........:::.....x.x.x..x.:.x::....::x:..xxx.......x.xx..... 102M 66/102 64.7% 102/94230402 0.0% 0/102 0.0% 125315973 64898582 +3296 chr4 + 190214555 160350627 160350626 160350698 72 TATAGTGTATGTATACATACATACACTATATGTATATATATGTATATATACATATACATATAGTGTATGTAT chr4 + 94230402 33416717 33416716 33416787 33416717 33416716 33416787 71 TACAGTTCATGGATACACACAGACACTGGATATACATATATATATATCTGTATACACATGTC-TGCACGTAT ..:...x:...x.....:...x.....:x..:..:......:.....x.::...:....:.x-..:.:.... 62M1D9M 52/71 73.2% 71/94230402 0.0% 1/71 1.4% 126933910 63280645 +4373 chr4 + 190214555 160351778 160351777 160352014 237 AATAAAACAAATGAAACA---TCACACCCGTCTGGTACACTGTCTAAAGAAACAAAAAACAGT--------AGAGAAAATGTCACCAAATGTCAAAACTAGAACTCCTACAAAATAAAGCAGAACATTTTCCTAGAGATAAAGACTGCTACACAAACCTACCAGAACTCTATAAATCAAATTCTCGA-----AAAAGGGAGACCTCAATAGGCTAGAATGTCAACATTAATAAATAAAAAGAGTCAAATAGAA chr4 + 94230402 23564716 23564715 23564956 23564716 23564715 23564956 241 AAAAAAGCAGATTAAACACTTTCACAAA-GACTAGTTTACTCTTAAAGGAAATGCAAAACTGTCAACAACAAGAGAAAATGTCATGAAATAGCGGCAGCAGAATAGCCAAAGACCAAGCCAGAACATTTTCCTTGGGATAAAA---GTTGAATAAACTCCATTAAATTTTCCCAATTTTGTTTTAAGAGAACAAAAACAAAGCCTTA--GGGAGAAAATGTCAATGCTAATAGAC------AGTCAAACTGAA ..x...:..:..x.....---.....xx-.x..:..x:...x.:x..:....::x.....x..--------.............:x....:x.::x.x:....:xx.:.x.:.x:..:x..............x.:......:---.:.:x.:....::xx:x:..:.:.x:x...:xx:..:.x::-----....:x:.::...:.--:..xx.:........:::.....:.:------.......:x... 18M3I7M1D34M8I72M3D41M5I15M2D26M6D12M 144/225 64.0% 241/94230402 0.0% 28/225 12.4% 136787062 53427493 +3085 chr4 + 190214555 160354998 160354997 160355058 61 ATATATATATATATATATATATATATATATACACACACATATATATGTGTGTGTATATATA chr4 + 94230402 63788529 63788528 63788589 63788529 63788528 63788589 61 ATATATACTTAGAATTAGTCATACATATATACATAAACAAATATACCTGTGTGTATATATA .......:x..x.xx..xx:...:.........:.x...x.....:x.............. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 96566469 93648086 +3132 chr4 + 190214555 160355035 160355034 160355089 55 CATATATATGTGTGTGTATATATATATATATATACACATATATATATATATATAT chr4 + 94230402 37579519 37579518 37579573 37579519 37579518 37579573 55 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ...................:......x..::.:..:......xx.:.::.x..:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 122775516 67439039 +4003 chr4 + 190214555 160356174 160356173 160356309 136 TATATATATTTTACATATATATAATATATTATATATAATATATATTATATAATATATATAATATATTATATATATTATATATATTATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATA chr4 + 94230402 26320213 26320212 26320344 26320213 26320212 26320344 132 TATATGTATTC-AAATGTTGATATTTAATCAGCTTAAATTTATCTCACATG-TATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA--GTATTGTATATGTAATA .....:....:-.x..:.xx...x.xx..:.xx.xx...x...x.:.:..:-......:x.:............:......:.x.....x.x....:...:.x...xx....x.x..--:...xx.....:..... 11M1D39M1D65M2D17M 94/132 71.2% 132/94230402 0.0% 4/132 3.0% 134035961 56178594 +3885 chr4 + 190214555 160356192 160356191 160356332 141 ATATAATATATTATATATAATATATATT-----ATATAAT---------ATATATAAT-ATATTATATATAT------TATATATATTATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATATATATAATATATTATATATATTA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..:..:.:.:.:..xx....x....x..-----..:..x.---------....x....-.xx...x..x...------.:......:..:.....x......:.x....:.......x..x...:...:xx...xx....x.x..:...xx.....:..x.. 28M5I7M9I9M1I13M6I84M 103/141 73.0% 162/94230402 0.0% 21/141 14.9% 134036009 56178546 +3289 chr4 + 190214555 160356193 160356192 160356341 149 TATAATATATTATATA--TAATATA-TATTATATAATATATAT---AATATATTATATATA------TTATATATAT------TATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATATATATAATATATTATATATATTATATATAATA chr4 + 94230402 26320179 26320178 26320344 26320179 26320178 26320344 166 TGTAATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGT-TGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:....:..x.:.:.x--.....x.-....x.x.x....:...---...:.-.x....x..------...x..x...------.:.....x:..:.....x......x......:.......x.xx...:..x:xx...xx....x..xx:...xx.....:..... 16M2I7M1I17M3I5M1D9M6I10M6I84M 108/148 73.0% 166/94230402 0.0% 19/148 12.8% 134036014 56178541 +3961 chr4 + 190214555 160356213 160356212 160356384 172 ATATATTATATAATATATATAATAT---ATTATATATATTATATATATTATATATTTTATATATTTTATAT--------AATATATATAATATATATTATATATAATATATATAATATATTATATATATTATATATAATATATATTATATAATATATTTAATATATTTATAGTATATATAATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATT-CAAATGTTG-ATATTTAAT-CAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATT------------TATTATGTATCTAATAGTATATTTTTAG------TATTGTATATGTAATA ..:..x.:.:.x..xx...x.....---x......:....-:.x..:..:-......x..-:.x:...x..--------x..:......x..:............x......:........------------...x..:...x.x...xx....x....:------...x......:..... 25M3I12M1D9M1D9M1D10M8I42M12D28M6D16M 116/151 76.8% 162/94230402 0.0% 32/151 21.2% 134036030 56178525 +3646 chr4 + 190214555 160356229 160356228 160356376 148 ATATAATATATTATATATATTATATAT-ATTATATAT-TTTATATATTT-TATATAAT-ATATATAATATATATTATATATAATATATATAATATATTATATATATTATATATAATATATATTATATAATATATTTAA---TATATTTATAGTAT chr4 + 94230402 26320183 26320182 26320331 26320183 26320182 26320331 149 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTA---TATACTACATATTATATATACTATATACAATATA---TTTATTATGTATCTAATAGTATATTTTTAGTAT ..:..:.:.:.:..xx...xx....x.-x......:.-..:.x..:..x-...x....-.xx.xx...x...x.:.:..:..---....:x.:............:......:......---.x...x..:...:...---.......x...... 27M1I9M1I11M1I8M1I23M3D34M3D16M3I14M 106/142 74.6% 149/94230402 0.0% 13/142 9.2% 134036046 56178509 +3349 chr4 + 190214555 160356259 160356258 160356354 96 ATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATATATATAATAT-------ATTATATATATTATATATAATATATATTATATAAT chr4 + 94230402 26320249 26320248 26320348 26320249 26320248 26320348 100 ATTTATCTCACATGT---ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ..x...:.:.:..:.---.....x..:....x.......:......:.......x..x...-------..x:.....x..xx:...x:.....:.x...x.:. 15M3D43M7I35M 69/93 74.2% 100/94230402 0.0% 10/93 10.8% 134036010 56178545 +3359 chr4 + 190214555 160356315 160356314 160356416 102 AATATATTATATATATTATATATAATATATATTATATAATATATTTAATATATTTATAGTATATATAATATATTATATAATATATTATATATATTATATAAT chr4 + 94230402 26320248 26320247 26320348 26320248 26320247 26320348 101 AATTTATCTCACATGT-ATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGT ...x...:x:.:..:.-.....:x.:....xx......x.....x:...........x:.:...x.....xxx...x.xxx:....:.....:.x...x.:. 16M1D85M 70/101 69.3% 101/94230402 0.0% 1/101 1.0% 134036067 56178488 +3115 chr4 + 190214555 160356799 160356798 160356855 57 TGTGTAGTATATACACACATACACACACACACACACACACACACATATATATATACA chr4 + 94230402 46140850 46140849 46140906 46140850 46140849 46140906 57 TGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ......:......:.....:..x.x....:........::::.:...:.x.:x.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 114215949 75998606 +12368 chr4 + 190214555 160359274 160359273 160359540 267 TCCGGAAAGTAATGAGGGAATTACCCTTGAATAGCTGGTAGTAGGTAGCATAACTTTACAATCTGTTCACTTTAAATTTCGCATGTAACTGCAGCAGTGGGAGTTGGAACGCAGGTTTAAGGCATAATGAAATTACCATGGAGAGGGGCCATCTAGCCAACAGAAGTCCAGC-TAGAAGTGACAGTTACACTGCTGCCATCCAAAAAGCATGTAAATAATGGCTCTGAAAATCAT-AGAGAATT-TAACCATAAATTTTATACAGATTTA chr4 + 94230402 23567712 23567711 23567981 23567712 23567711 23567981 270 TCCAGTAATTAATGGTTAAATTACCCTTGGGTAGTAGGTAGTAGGTAGCATAACTATACAGTCTGGGAGCTCTAAATTTCACATCTAATTGTAGCAGTGGGAGTTAGAACACAGGCAGAAGACATAATGAAATTACCACAGGGAGGAACAAACAAATGAACTGAAGTCCAGCAAAAAAGTTATAGCTATGTTGCTGTCATCTTGAAACTCTGTAAATAACAACTTTGAAAGCCATGAGAGCACTAGAACAATGTATTTTATGTGCATATA ...:.x..x.....:xx:...........::...:x...................x....:....xxx:..:........:...x...:..:.............:....:....:xx...:................::.:....::.x.x.x.::x...x..........-x.:....x.:..:..:::.....:....:x:...x:x.........:::..:.....::...-....x.:.-x...x..:x.......:::x..x.. 172M1I62M1I8M1I25M 195/267 73.0% 270/94230402 0.0% 3/267 1.1% 136791562 53422993 +6726 chr4 + 190214555 160389572 160389571 160389815 244 CTTTTTTCTTTTAATAAAATGGATCATCAAAG-GACTAACTCAGAGAGAAATAAGAAGAAAAGCACTTGAATCT------AATATTTCCATGGGTTTTAAA---AACAGGCTTAGACTTTGATCATTTCTCATTAGATCAAAGAGTA-TTTGGTACCCTTTGAATGGAAATG----TATTGTAGT--ACATATCAAATTTAATTCACAAGTTCATTACAGTAAAATGAAAGAAAAAAATCCACTTTTACTGTGGAATAAAT chr4 + 94230402 23572074 23572073 23572332 23572074 23572073 23572332 259 CTTTCTTCATATAATAAAACACATAATCAAAGCAAAGAGCTAAGATAAAAGT--GAAGAAAAGCAATAAAATTTCCACTTAGTGTTTTCTTTTTTTTTTTTTTTAACAAGCTTAGTCTTTGATCATTTCACATTTGATCAAAGAGTGCTTTGATGTTCTTTGAAGAAATATGGAATTATTCAAGTAAAAATATAGAATTTGATTCGCAGTTTTATTGGAAGAAAATAAGTGAAGGAGCTGGACTGGTAATTTGTAGTAGGT ....:...x.x........::x..x.......-:.xx.:..x...x.:..:.--...........x.x:...:.------.:.:...:.x.xxx....xxx---....:......x.............x....x...........:-....:.:::.......x::.x...----....xx...--.x....x:.....:....:..:x..:...:x.:x.....:.:x...::.:x.xx...xx..x.x..x.:..::. 32M1I19M2D20M6I21M3I43M1I24M4I9M2I74M 169/242 69.8% 259/94230402 0.0% 19/242 7.9% 136817498 53397057 +6375 chr4 + 190214555 160390602 160390601 160390742 141 TACAGTATATATAGTAAAGTATACATATATAACATAATATATATAATATTTTGTGTATATATACACACACATATGTGTGTGTGTGTATATAGATATACATACATATGTGTGTGTGTGTGTGTGTATATATAT-ATATAGTAT chr4 + 94230402 44243181 44243180 44243318 44243181 44243180 44243318 138 TACATtatatata-taatgtatatatatata---taatatataatatatataatgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGATTTAGTGT ....x........-...x.....:.......---.........xx....x.x:...:.:.:.::::.:.:....:.:.:.:.:.:..:.:...:.:...:...:.:..............x...:.......-..x....:. 13M1D17M3D98M1I9M 103/137 75.2% 138/94230402 0.0% 5/137 3.6% 116147421 74067134 +3005 chr4 + 190214555 160390667 160390666 160390721 55 CACACATATGTGTGTGTGTGTATATAGATATACATACATATGTGTGTGTGTGTGT chr4 + 94230402 37579519 37579518 37579573 37579519 37579518 37579573 55 CATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT ..:.:............:........:..::...::.....:xx....::x:... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 122811148 67403407 +3461 chr4 + 190214555 160390674 160390673 160390738 65 ATGTGTGTGTGTGTATATAGATATACATACATATGTGTGTGTGTGTGTGTGTATATATATATATA chr4 + 94230402 27325491 27325490 27325555 27325491 27325490 27325555 65 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATA ...:..:..xx......:.xx.:x..x..x..............:.......:..::..:..... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 133065183 57149372 +3496 chr4 + 190214555 160405559 160405558 160405610 52 TAAAACTGGTTTTTTGTTTGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 28946003 28946002 28946054 28946003 28946002 28946054 52 TAAGATGGGTTTTTTGTTTGTTTGTTTGTTAGGCTTTTTTTTTTTTTTTTTG ...:.:x...............x...x...:.x:.................. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 131459556 58754999 +3459 chr4 + 190214555 160405567 160405566 160405610 44 GTTTTTTGTTTG-TTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 79896036 79896035 79896080 79896036 79896035 79896080 45 GTTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTG ....x.......-................................ 12M1I32M 43/44 97.7% 45/94230402 0.0% 1/44 2.3% 80509531 NA +3373 chr4 + 190214555 160418598 160418597 160418662 65 TGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033202 76033201 76033264 76033202 76033201 76033264 63 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:...:.--....:.:...........::........x.xx.x...x::...........:.. 9M2D54M 49/63 77.8% 63/94230402 0.0% 2/63 3.2% 84385396 NA +3151 chr4 + 190214555 160484549 160484548 160484694 146 GTTATAGGTATTATGTATATATCTTATGCATATCATACCT-------CAAGTAAGATGTGTATCTTATGTATATTATATGAGTTCTTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 68837017 68837016 68837150 68837017 68837016 68837150 134 GTTACAGTTCATGTGtatatac---atacata-catacctacacacacacGCAAGGCCAGGAAATTA-------------AGTTCTG--GTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ....:..x.xx.:........:---..:....-.......-------..x.:...::xx.x.xx...-------------......x--..:x.x::.....:.............:.:.:.x...:...:...:.:..::.:.:..x.x... 22M3D7M1D7M7I20M13D7M2D64M 90/127 70.9% 134/94230402 0.0% 26/127 20.5% 91647532 NA +3388 chr4 + 190214555 160484600 160484599 160484693 94 TGTATCTTATGTATATTATATGAGTTCTTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834517 85834516 85834602 85834517 85834516 85834602 86 TGTAGTTTGGGTTTTTTAT--------TCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ....x:..:x..x.x....--------.:..x.....x.................:.xx..:..x::...:....:..x...:..:.x...::. 19M8D67M 62/86 72.1% 86/94230402 0.0% 8/86 9.3% 74650083 NA +3524 chr4 + 190214555 160484624 160484623 160484706 83 TTCTTATGTGTGTGTGTGTGTGTGTGTGT----------GTGTATATATATATATATATATATATATATATATATATATATGACTCTGAGGAT chr4 + 94230402 85834535 85834534 85834627 85834535 85834534 85834627 93 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAAT ...x.x.....x.................----------.::..:....:..x...:..:.x...::.:.:...:.:.:...:.::x.:.:.. 29M10I54M 59/83 71.1% 93/94230402 0.0% 10/83 12.0% 74650089 NA +3613 chr4 + 190214555 160484624 160484623 160484695 72 TTCTTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 85834529 85834528 85834600 85834529 85834528 85834600 72 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG ..:....x::.x.....x...............:...xx..:..x::...:....:..x...:..:.x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 74650095 NA +3061 chr4 + 190214555 160484630 160484629 160484692 63 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 70094142 70094141 70094204 70094142 70094141 70094204 63 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATAT ...:x:.:.......x...x...x.....:.....:......x.:.xx.x:...x........ 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 90390488 NA +3213 chr4 + 190214555 160484630 160484629 160484694 65 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 79265520 79265519 79265584 79265520 79265519 79265584 65 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ............::........xx........:...:.::.:.::.:.:::.x.:....x.:.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 81219110 NA +3222 chr4 + 190214555 160484631 160484630 160484695 65 GTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 79265519 79265518 79265583 79265519 79265518 79265583 65 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTG .............::........xx.:......:...:.::.:.::.:.:::.x.:....x.:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 81219112 NA +3173 chr4 + 190214555 160484633 160484632 160484695 63 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 79265519 79265518 79265581 79265519 79265518 79265581 63 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTG .............::........xx.:......:...:.::.:.::.:.:::.x.:....x.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 81219114 NA +3328 chr4 + 190214555 160484634 160484633 160484692 59 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834599 85834541 85834540 85834599 59 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT .....x...................xx..:..x::...:....:..x...:..:.x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 74650093 NA +3188 chr4 + 190214555 160498571 160498570 160498637 67 TCCCCATTGGCTTA--GCCTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTCTTTCTTTTTTTTTTTCTTT chr4 + 94230402 72001411 72001410 72001479 72001411 72001410 72001479 69 TCTCAATTAACTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTT ..:.x...::..x.--.....::...:.x..:::.x...........:...:.:.........:..:.. 14M2I53M 49/67 73.1% 69/94230402 0.0% 2/67 3.0% 88497160 NA +3004 chr4 + 190214555 160504874 160504873 160504932 59 GTGATATTATGAGATATATATATATATATATATATATATATATATATATACACACACAC chr4 + 94230402 60163453 60163452 60163511 60163453 60163452 60163511 59 GTGCTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACAC ...x....xx.::.x...x............:.:........x..:.:x.x........ 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 100341421 89873134 +3136 chr4 + 190214555 160510956 160510955 160511058 103 TTTTATATATATATGCATATATACACATATAGGTATAGGTATAGATATATACACATATAGGTATATATATGTTTGTGCTCACACACACACACACACAGAGGGA chr4 + 94230402 85834528 85834527 85834626 85834528 85834527 85834626 99 TTTTTTATTCATTTGTGTCTGTG----TGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAA ....x...x:..x..::.x.:.:----.:.:x..:.:x....x:..:..x:..:.:...x...x...:......:...x....:.......::xx.x.:..:. 23M4D76M 64/99 64.6% 99/94230402 0.0% 4/99 4.0% 74676428 NA +6564 chr4 + 190214555 160564014 160564013 160564175 162 GCTGGCGGAAAGATATGAACATCCCTGCAGATTAAAATGCAAATTTTATTGCTGGAAA---CAGCAATACACAGAAAGGCCATAGAGCCTTTTAGCTTTTCTGACAGCAGCTTGCAGAACCAGTGCACTGAATCACTCAATATCTTTAAGTGTCTATCCTATTCT chr4 + 94230402 23624619 23624618 23624782 23624619 23624618 23624782 164 GCTAACAGAACAGTATGAATTCGTCTGTAGATTAAAGTGTAAATTATACTGGGGAAAAAAACACCAAAACAGTAGTATGGCATTGGGCTATTCAGCTTT-CTGACATCAGCTTGCAGAAGCACTGAAATTAATCACTCAATAATTTTAAGTATCAATCATATTCT ...::.:...x::......:x:x:...:........:..:.....x..:..xx.:...---..x...x...xx::x.x.x...x.:..:x..:......-......x............x..x..x.x.x............x:.......:..x...x...... 58M3I38M1D65M 117/161 72.7% 164/94230402 0.0% 4/161 2.5% 136939395 53275160 +3235 chr4 + 190214555 160586881 160586880 160586968 88 TATACATATATGTATAAATATATACATATATGTGTATCTATATACATATATGTATATAGATACATATATATGTATATATACATATATG chr4 + 94230402 85834533 85834532 85834616 85834533 85834532 85834616 84 TATTCATTTGTGTCTG----TGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ...x...x.:...x.:----.:.:::.:.:.......:x..:..x::...::...:..:......:.x....:.:.:.....:.:... 16M4D68M 56/84 66.7% 84/94230402 0.0% 4/84 4.8% 74752348 NA +3219 chr4 + 190214555 160586919 160586918 160586980 62 TATATACATATATGTATATAGATACAT----ATATATGTATATATACATATATGTAAATATATACA chr4 + 94230402 46063300 46063299 46063365 46063300 46063299 46063365 66 TACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ..:..:::..:....:...::::....----..:.....x..............xx.......... 27M4I35M 48/62 77.4% 66/94230402 0.0% 4/62 6.5% 114523619 75690936 +3141 chr4 + 190214555 160606287 160606286 160606385 99 AATATGATATGCTCACACACACACACACACACACACACACACGCACACACACACACAGACACACAGAGACACACATACCTATTGCCCCAAGTTGATTGT chr4 + 94230402 74526048 74526047 74526146 74526048 74526047 74526146 99 AATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCAGGTTGCTTGT .....x:..x::.x.x.x....xx.x.:x.............:::x...:.....x.x.:.:..:x.x.:.:::..x:xx.....::..:....x.... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 86080239 NA +3397 chr4 + 190214555 160629169 160629168 160629253 85 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAGCATCATGCCA chr4 + 94230402 76033211 76033210 76033289 76033211 76033210 76033289 79 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.:...........::........x.xx.x...x::.........:.:..x:xx:..:..:..------.:...x...... 67M6D12M 57/79 72.2% 79/94230402 0.0% 6/79 7.6% 84595958 NA +3143 chr4 + 190214555 160632257 160632256 160632338 82 ATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGTAGATGTGTATATATATATAT chr4 + 94230402 85834534 85834533 85834615 85834534 85834533 85834615 82 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...::.x.....x.................:.xx:...:x.::.:::.:...xx:.::....xx...:::.:...:.:.:.. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 74797723 NA +3210 chr4 + 190214555 160632258 160632257 160632339 82 TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGTAGATGTGTATATATATATATA chr4 + 94230402 85834529 85834528 85834610 85834529 85834528 85834610 82 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...x.:.x::.x.....x.................:.xx:...:x.::.::x.:....x:..x....x...::.:.:...:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 74797729 NA +3042 chr4 + 190214555 160632269 160632268 160632339 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGTAGATGTGTATATATATATATA chr4 + 94230402 39131745 39131744 39131815 39131745 39131744 39131815 71 GCGTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATA .:..x...::.::x......x...x.x.......:x....x::...:.x......::.x...x:....... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 121500524 68714031 +3044 chr4 + 190214555 160671127 160671126 160671187 61 CCTGCCCCCCTCTCTCTCTCCCCCGCCCTCTCTCTCTCTCTATCCGCTTTGCCTCTTTTGC chr4 + 94230402 76399312 76399311 76399372 76399312 76399311 76399372 61 CCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTGCTTTTTTTCTTTTGC ...x.x:.:........:..:..:......:.x:.xx:..:...:.....x::........ 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 84271815 NA +3343 chr4 + 190214555 160672240 160672239 160672301 62 ACCAT--ATATATATATATATATGTATATATACACACACACACACACACACACATATATACACA chr4 + 94230402 61270772 61270771 61270835 61270772 61270771 61270835 64 ACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .....--......x.:..............::...::.....x....x..:::...x:...... 5M2I57M 49/62 79.0% 64/94230402 0.0% 2/62 3.2% 99401468 90813087 +3225 chr4 + 190214555 160672245 160672244 160672305 61 ATATATATATATATATGTATATATACACACACACACACACACACACATATATACACACACA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x......x.:...:...:....:..:...::.....x....x...:....x::..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 99401470 90813085 +3037 chr4 + 190214555 160672259 160672258 160672309 51 ATGTATATATACACACACACACACACACACACATATATACACACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ..:......:......x.x....:........:.:....:...x..x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 114531403 75683152 +3062 chr4 + 190214555 160672269 160672268 160672321 53 ACACACACACACACACACACACATATATACACACACATATATATACATATATA chr4 + 94230402 74526066 74526065 74526118 74526066 74526065 74526118 53 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATA ....xx.x.:x............:..:x...:.....x........:...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 86146203 NA +3319 chr4 + 190214555 160689133 160689132 160689198 66 AGATCATTATTATTATACCTATTTTACAGATGAAGAAACTGAGACACAGAGGAGTTAAGTCATTTT chr4 + 94230402 28016190 28016189 28016255 28016190 28016189 28016255 66 AGGTAAGCAATATTATTCCCATTTTACAGATGGAGAAATCGTGATACAGAGAGGCTTAGTCTTTCT ..:.x.x:.x......x..:............:.....::.x..:......::.:.x....x..:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 132672943 57541612 +3319 chr4 + 190214555 160723077 160723076 160723136 60 TGCACCTGTAATCCCAGCTACTAGGGAGGTTAAGACAGGAGAAACACTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:.........x.::...:.:..x.xx.x...:...........:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 84689872 NA +3007 chr4 + 190214555 160726529 160726528 160726603 75 ATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATGTATATATATACA chr4 + 94230402 89748650 89748649 89748724 89748650 89748649 89748724 75 ATGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATATGAAGACACATACA ..:.:..:......:.xx:x:...:.:x..:.:...:.x::::....:........x......x.x.:.:..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 70977879 NA +3308 chr4 + 190214555 160726533 160726532 160726605 73 ATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------TATATGTATATATATACACA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------..:...x...x.....:.:. 53M11I20M 54/73 74.0% 84/94230402 0.0% 11/73 15.1% 137478811 52735744 +3120 chr4 + 190214555 160726556 160726555 160726620 65 TATATATATATACACACACACACACACACATATATGTATATATATACACACATATATATTATATG chr4 + 94230402 89823932 89823931 89823993 89823932 89823931 89823993 62 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT---TCTGAGTTATATG .......:x....................x....xx........:::.:---.x.:x:....... 49M3D13M 49/62 79.0% 62/94230402 0.0% 3/62 4.8% 70902624 NA +3039 chr4 + 190214555 160726557 160726556 160726607 51 ATATATATATACACACACACACACACACATATATGTATATATATACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:......x.x....:.....:.::........:.x..x:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 114585701 75628854 +4278 chr4 + 190214555 160729677 160729676 160729810 134 TTTATTTATATTTTCTCTAAATCTTCAGGATTT-TGTAAGTTTTTCCAAATTCT-TCCTACTTTAATTTTTTCTTATTTTTTATTTTCCTCTTGGGTTATTCATGGAGAGCTGACACTGAAATTCATTCCAGTCAT chr4 + 94230402 23695516 23695515 23695651 23695516 23695515 23695651 136 TTTATCTGTATCCATTATAAATCTTCAGCATCTCTCCTATTCTGTTTGCATTCAATGTTAAACTCATTTTTCTTTTAGTTATGTTTTCCCCTTGTCTTAGTCATGAAAGTTTGACACCGAAATTCATTTCAGTCAT .....:.:...::x:.x...........x..:.-.x:x.x.:.x.:::x....x-.x:..xx:.x......::..xxx..x.:......:....xx...x.....:.::x:......:..........:....... 33M1I20M1I81M 90/134 67.2% 136/94230402 0.0% 2/134 1.5% 137034161 53180394 +3524 chr4 + 190214555 160730440 160730439 160730520 81 AGCCTGGGCAACAGAGCGAGACTCCGTCTCAAACAAACAAACAAACAAACAAACAAAAAAAGAATTACAGAAATAACGTAT chr4 + 94230402 68927868 68927867 68927939 68927868 68927867 68927939 72 AGTCTGGGATATAGTGCAAG---------TAAAAATTAAAACAAACAAACAAACAAAAAAAGAATTCCACAAATAACATAT ..:.....xx.:..x..:..---------:...x.xxx............................x..x.......:... 20M9D52M 58/72 80.6% 72/94230402 0.0% 9/72 12.5% 91802572 NA +3823 chr4 + 190214555 160731825 160731824 160731949 125 CCATCCCTCCCTTCCTTCCTTCTTTCTCTCCCTTCCT-TCCTCCCTCCCTCCTTCCCTTCCTTTTTTTCCTTCCTTCC---TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCCCTCCCTCCC chr4 + 94230402 92917621 92917620 92917741 92917621 92917620 92917741 121 CCATCCC--CCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTC------TCTGTCCACTTTCCCTCCCTGCC .......--....:..x....:..:.....x......-:..:.......::....:..xxx:x.:..::.:....x.:---...x..:..:.x.::x...------..:x...x::..........x.. 7M2D28M1I40M3I19M6D23M 83/117 70.9% 121/94230402 0.0% 12/117 10.3% 67814204 NA +3023 chr4 + 190214555 160737544 160737543 160737624 81 AATATTTTCCAATAGGA----AGAAAAAAAGAGTTCTCCTTCTGCTTGTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTGTTTTT chr4 + 94230402 3113709 3113708 3113793 3113709 3113708 3113793 85 AAGATTTATTGACAGGGCTGTAGAAAAGTAGAGTTGTGTTTTTGTGGCTGTTTGGCTTGGTTGGTTGTTTTTTTTGTTTGTTTTT ..x....x:::.:...:----......:x......x.x:..:..:xxx.x...x.:...x...x.......x............. 17M4I64M 58/81 71.6% 85/94230402 0.0% 4/81 4.9% 157623835 32590720 +3524 chr4 + 190214555 160842128 160842127 160842223 96 ATATATATATACACACACACACGTGTATA------TATGTATATATGTGTGTGTGTATATATATGTGTATGTATATGTGTATATCCTCAGCTG-TTATACTTT chr4 + 94230402 22600200 22600199 22600302 22600200 22600199 22600302 103 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAATCCTGATCTGCTTCTACTTT .:.:....x:...::..x....:..:...------.........x.........:...::..::::...x..:xxx...x.x.....x.x...-..x...... 29M6I58M1I9M 69/96 71.9% 103/94230402 0.0% 7/96 7.3% 138241928 51972627 +3031 chr4 + 190214555 160842152 160842151 160842201 50 GTATATATGTATATATGTGTGTGTGTATATATATGTGTATGTATATGTGT chr4 + 94230402 86633941 86633940 86633990 86633941 86633940 86633990 50 GTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ......:.x.:....::..:...........:..x......:..x...:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 74208211 NA +3645 chr4 + 190214555 160876736 160876735 160876814 79 GTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:...........::........x.xx.x...x.x...........:..x:xx:..:..:.. 6M2D71M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 84843535 NA +3237 chr4 + 190214555 160900957 160900956 160901034 78 GTGCTGCACACGTCTGTCCCAGCTACTTGGCAGGCTGAGCCAGGAGAATCACTTGAGCCCCAGAGGCGAAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTA-GTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.....::..x-..:...........:x..........xx.x...x.......:...x::..x:xx:..:..:.. 14M1D63M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 84867756 NA +3357 chr4 + 190214555 160901093 160901092 160901143 51 AAAAAACAAACAAAACAAAACAAAAACAAACAAACAAACAAAAAAACAACT chr4 + 94230402 24461618 24461617 24461668 24461618 24461617 24461668 51 AAAAGACAGATTAAAAACAACAAAAACAAACAGACAAACAAAGGAACAACT ....:...:.:x...x.x..............:.........::....... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 136439475 53775080 +7161 chr4 + 190214555 160934867 160934866 160935149 283 AGTGTTCTACATCATTAGAGTTTAGGTCACAATCTCAAATTTTTATGAC-TCAAGGTAAACTCCAAGCTGTGAGAACCTGGTGTGAACAAGATAGTAAAAATCGAAGCAGCAATATAGCAAGGAACATTAAAAGCATTAATGAACAAACATAACCAT-------AGAAACTTTTAGGAACCAGAAATAGGTCTCCATAA-AGTAAAATGAAGAA-CCATTGCATTT--AAAGAAAAGCATTTTCACTGG-AGTTAAAATAAGTGCAAGT--CAAGTCTGCT-TTAGAA-AGAAAATTTGG chr4 + 94230402 23759792 23759791 23760066 23759792 23759791 23760066 275 AATGCTTTGTATCATTACAGTTTAGGTCTGAGTCACGAATTTTCGTTACAGTGAAATAAATTCCAAGCTGTGAG--TTTGATGC-----------------------CTGCAATTCAGCAGGGGACATTAAAAACATTAATGAACAAACATAATTGTCTCAAAACGAAACTTTTAAGAATGCAGAACAATTCTCCATAATAGTAAAACTAGGAAGACAGAACAGTTTAAAATAAAAGTTTTCCCAAAGGCAGAGAATACAACTGAAAGTAGAAATTCTTCTATTAGAATAGTTAATTTGG .:..:.:.::.......x..........xx.:..x.:......::.x..-x::.::....:.............--::..:..:-----------------------.x.....x:....:..:.........:...................:::.-------x..........:...:xx::..:.:x.........-.......:x.:...-x..xx:..x..--...x.....:x..::..xx..-..xx..x.:..x..x....--x..x...x..-......-..xx....... 49M1I24M2D8M23D50M7I35M1I14M1I11M2I21M1I19M2I10M1I6M1I11M 189/258 73.3% 275/94230402 0.0% 42/258 16.3% 137175075 53039480 +3785 chr4 + 190214555 160950252 160950251 160950330 79 GCAGTGCATGTCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACTCAGGAGTTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:..--.....:...........::........x.xx:x...x.........:...:..:.xx:..:..:.. 11M2D66M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 84917051 NA +3066 chr4 + 190214555 160988590 160988589 160988664 75 AGGCCCTGTCTCAAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAGAAAAAGAAAAAAGAAAAAAGA chr4 + 94230402 89572246 89572245 89572320 89572246 89572245 89572320 75 AGTCCCTACACCACATAATCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGA ..x....::x:..x.x...x..x.:..............:.:.:.....:..x::x....:x.x..x.....x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 71416344 NA +3002 chr4 + 190214555 161012318 161012317 161012391 74 GCGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCTGTTGAACCCTAGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........::::........x.xx:x...x.xx........x::..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 84979114 NA +3148 chr4 + 190214555 161013471 161013470 161013512 42 TGGTTTTTGTTGTTGTTGTTGCTTTATTTTTGTTTTTATTTA chr4 + 94230402 58374889 58374888 58374930 58374889 58374888 58374930 42 TGGGTTTTGTTGTTGTTGTTGCTTTGTTTTTGTTTAAATTTA ...x.....................:.........xx..... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 102638582 87575973 +3098 chr4 + 190214555 161022629 161022628 161022695 67 ATACACATGTACATGTGTATACATACATACGTATATGTGTATATACACATATACGTATGTATGTATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .....::.............:x::....::x:..:.:...x....:.......:.xxx:...:..:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 114959330 75255225 +3226 chr4 + 190214555 161022650 161022649 161022711 62 CATACATACGTATATGTGTATATACACATATACGTATGTATGTATACACATATAT----ATATATA chr4 + 94230402 46063298 46063297 46063363 46063298 46063297 46063363 66 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA .......::...:........:x:.....:.x.:.:.:.:.x....:........----....... 55M4I7M 48/62 77.4% 66/94230402 0.0% 4/62 6.5% 114959352 75255203 +3283 chr4 + 190214555 161052207 161052206 161052302 96 ACTGTGATTTTGTTGCCAATATATGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TACACACACACATATATAT chr4 + 94230402 4618332 4618331 4618426 4618332 4618331 4618426 95 ATTGTGGCTGTTTTTCTTTCTTGTGCCT-TATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT .:....::.x.x..x.:xx:x.:.....-.x.......::..............x:....::......x.x......-..:.x.:.:.:-....... 28M1D48M1I11M1D7M 68/94 72.3% 95/94230402 0.0% 3/94 3.2% 156433875 33780680 +3071 chr4 + 190214555 161052229 161052228 161052320 92 ATGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACAC------ACACACATATATA---TACACACACACACATATAT chr4 + 94230402 60831523 60831522 60831623 60831523 60831522 60831623 101 atacaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ..:.x.x...x.....x.............x.x.x.....:.:....:.:.:.:::....------.:...:x.....:---.:::.:..::::::..... 60M6I13M3I19M 62/92 67.4% 101/94230402 0.0% 9/92 9.8% 100220706 89993849 +3415 chr4 + 190214555 161052238 161052237 161052322 85 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACAC------ACACATATATATA---CACACACACACATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.x.......:.:....:.:.:.::.....------.:....x.....:---::::.:..::::.:..... 53M6I13M3I19M 61/85 71.8% 94/94230402 0.0% 9/85 10.6% 100220708 89993847 +3642 chr4 + 190214555 161052240 161052239 161052324 85 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACATATATATACACACA---------CACACATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.:.......:.:....:.:.:..:.....x:x..x...:.:x:.:.---------.:..::.:.:..... 70M9I15M 61/85 71.8% 94/94230402 0.0% 9/85 10.6% 100220710 89993845 +4242 chr4 + 190214555 161052242 161052241 161052326 85 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACATATATATACACACACA---------CACATATATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............:.:.......:.:....:.:....:.....x.x..x.....:x:.:.---------.:...:.:.:..... 70M9I15M 65/85 76.5% 94/94230402 0.0% 9/85 10.6% 100220712 89993843 +3919 chr4 + 190214555 161052244 161052243 161052338 95 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACATATATATACACACACACACA---TATATATATATATATATATACCT chr4 + 94230402 60831530 60831529 60831627 60831530 60831529 60831627 98 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT ...x.....x...........x.:.:.......:.:....:......:....:x.x..x.:...:x:.:.::---.:.::::..:.:.:.....x:.. 72M3I23M 65/95 68.4% 98/94230402 0.0% 3/95 3.2% 100220714 89993841 +3748 chr4 + 190214555 161052246 161052245 161052346 101 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACATATATATACACACACACACATA---TATATATATATATATATACCTATACATAA chr4 + 94230402 60831530 60831529 60831632 60831530 60831529 60831632 103 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT-CATAA ...x.....x.........x.x.:.:.......:.:...........:..:.:x.x..x.:...:x:.:..:---.:.::::..:.:.:....::.x.-..... 72M3I23M1D5M 69/100 69.0% 103/94230402 0.0% 4/100 4.0% 100220716 89993839 +3294 chr4 + 190214555 161052260 161052259 161052347 88 TCTCTATATATATATATATATATATACACACACACATATATATACACACACACACATATATATATATATATATATACCTATACATAAA chr4 + 94230402 58675382 58675381 58675458 58675382 58675381 58675458 77 TCTCTACACATCTTTGTATGCATATATATACACTCATATGTG--CACACACACTCAAATATATTTA---------GCCTATACTTAAA ......:.:..x.x.:...::.....:.:....x.....:.:--.........x..x......x..---------:.......x.... 42M2D22M9D13M 60/77 77.9% 77/94230402 0.0% 11/77 14.3% 102376878 87837677 +3127 chr4 + 190214555 161063140 161063139 161063316 177 TTCTCCTCCTTCCTCTTTTACCCTCTCCTTTTCTCTCTCCTCCTCCCTTTCTCTCTCTTTTTCTCTCTCCTCCTCCCTTTCTCTCTCTT-------------TTTCTCTCTCTCATTCTACTTGATTTTATTTTTCTTTATCACTAG------------ATGGTTTTGAGGCCTAAGGCACAGAATTAATCTCTCTATTTCA chr4 + 94230402 10726119 10726118 10726316 10726119 10726118 10726316 198 TTTTATTTCTTTGTTGTTTCCCCCCCCCTTTTTTTTCTCCTCCCCCCGTTTTTTTTTTTTTTACAAAAATTTCTACATCTAAATCACTTTGCTATAGAAACATTAttttctttcctttttttt--tttttttttttttttACATTAGTTAAAGCAGAACCTGCTTTTGTGAAAAAAGACA-AGGATCAAGGTCT-TATTTCA ..:.x:.:...:x.:x...x...:.:......:.:........:...x..:.:.:.:.....x:xxxxx:.:..x.x.:.xxx..x...-------------..x:.:...:..x..:.x:..--....x.....:...xx..:...------------x..x.....x.:xxx...:..-..:..:..xx...-....... 89M13I21M2D22M12I21M1D13M1D7M 113/173 65.3% 198/94230402 0.0% 29/173 16.8% 150337021 39877534 +3037 chr4 + 190214555 161064249 161064248 161064293 45 TAAGCTTTTTCTATTTGTATTTGTAGTGTTTTTTTTTTTTTTTTT chr4 + 94230402 90392371 90392370 90392415 90392371 90392370 90392415 45 TAAGCTTCCTCTGTTTTTTTTTGTGGTGGTTTTTTTTTTTTTTTT .......::...:...x.x.....:...x................ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 70671878 NA +3284 chr4 + 190214555 161086694 161086693 161086807 114 AGTGAGTAGGTAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAGGATTACCTGTGAGAAAACATTTTAATTTCTAAATTTTCAAGGCAT chr4 + 94230402 33201092 33201091 33201205 33201092 33201091 33201205 114 AGTCAGTAAGCATTTGAGGGAAAAAAAAAAAAAAAAAAGAAATAAGTAAGCTAGAAGAAATAAGTAAAGGAGTATTTGCAAGGAAACAGCACTGGCTTTAGTTTGGCAAGGTAT ...x....:.:.xxx:.:::...............:.....:x.::x:.:xx.:.::..:x...x......x..::..::..:.....x:x:x:x:.:..:x..xx.....:.. 114M 68/114 59.6% 114/94230402 0.0% 0/114 0.0% 127885602 62328953 +3171 chr4 + 190214555 161086699 161086698 161086774 76 GTAGGTAAAAAAA------AAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAGGATTACCTGTGA chr4 + 94230402 32898245 32898244 32898326 32898245 32898244 32898326 82 GTAATTAGAAAAGCTTCTTGAAGGGGAAAAAAAGAAGAAGAACAAGAAGAAATCTAGAAAATCAGAAAGAGAATACTTGTGA ...:x..:....:------:..::::.......:........x.........xxx.....:xx.....::..x...:..... 13M6I63M 55/76 72.4% 82/94230402 0.0% 6/76 7.9% 128188454 62026101 +3191 chr4 + 190214555 161086705 161086704 161086762 58 AAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAG chr4 + 94230402 54037034 54037033 54037091 54037034 54037033 54037091 58 AAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAG .....:................:x....:xx:..:..x..:.:.x.:...:....... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 107049671 83164884 +3871 chr4 + 190214555 161086999 161086998 161087151 153 TTAGGTGATGTCAGGGAAGATTGTAAACCCATAGTACTCGACCAATGAGGAACTGGGCGAGGGAGTTATGAGC---------TAGGAGATAAATTACCTGCTGTAAC------TGCCCCAGGTGTGCCTGCCTACCAGGCACCCAATCTAGCAAAACCGCCATTAAAA chr4 + 94230402 24042385 24042384 24042545 24042385 24042384 24042545 161 TTAGTTGAGCATCGGGAAGATTGTGAACCTAAAGTACTCAGCCAATGAGGAACCAGGGAAGAAAGAGATAAGCGTCAAGTAATAGGGCATAAA-----AGGTGTAACACTGTTTTCCGCATGTGCTCCTGCTTGTGGGAAGCCCA--CCACTGCAATCACAAATAAAA ....x...xxx:x...........:....:.x.......::............::..x:..::..xx..:...---------....:x.....-----x.x......------.x..x..x...:x.....:.::x:.:x:....--.:.x::x..:.:.x.x..... 73M9I11M5D9M6I32M2D21M 100/146 68.5% 161/94230402 0.0% 22/146 15.1% 137044614 53169941 +9468 chr4 + 190214555 161092694 161092693 161093166 473 CTTTACTGCCTTGGCACCTGAAATGAAAAATCTGAGTGCAGGAATGAGGCACTAGCAATTTACCTTACAGTACTATAGATTTTGAAGATTGATGGCATTTTGTTCTTCTTGTACAGCACATTGGATACGTGAA------------GAGGTTATATGGTCTGCCTTTGTACACTAAATTTATATCTGATTTATAAGCTGCATAGAGCTCTCCATCAAAATAACAAAAAAGGTTTCAGTGCTGCTTAGAATGGCATTCTGACTTTTGTCTAACAATGAAATG-----------------TGATTTAAAGTGTATCACCTTCTTGATGGAGAAATCAAACCCCTCCCCACTGCCTATTTTACAACTTATTTCAAATAAGTCCTTCAATTTGGTTTGTGGCAAGTATGATTTCTTCAACTTTGACAGATTTATTTTGATTCTGACAAAAGTATCACCAAATAATGGCTCTGTTCTAAAAGGGAAGGCACTTACTTTTGCCTTTGAC chr4 + 94230402 23820131 23820130 23820597 23820131 23820130 23820597 467 CCTTTCTTCTCTGGTGACTGAAGTTTTCAGACAGAGTG-AAAAATTAAACATTGGAAATTTATCTCGTGGCGC-----ATTTTGAAGATTGATGAAATTCTATCCACCTTGAATGACATACTGAATACATGGAACTGCAGATGTGGGAGCTATGAAGTCAA-------ACAGCGAAGTTATTTGTGATTTATAAGCTCCAGAAGGCTTTACATCAAAACAGCAGGAAGGGCTATCATATGGTCTAGAATGA-ATCCTGCTTCTTAGCAAACAGGAAAATGCCCCTAAGAGCTAAATATGATTTAAAGGACGTAATCTTCCTGCAGGTAAAAGCATCCCCCTA-------------TAGCTACTTATTCTAAATGAGGCCTTCAGTTTTCTTCCTAGCACCAAGCACTTCTTGGCTTTTGATGGATTTATTGCTCTCCTGCC-----TGTTTCCAGCAAACACTTCTCTTCCTCAAAAGATGAGATTAG---TTGCCTTAGAC .:..x..x.::...::x.....:.xxxx.:x.x.....-.::...x.::..:.:.x......:..::::.::.-----................:x...:.:.:.x:....x.:::..:.:..:....:..:.------------.::.:...:x:...x:-------...x::..x....x.x.............x..x.::...:.x........:.:..::..:..:.x:x:.::x.::.......:-..:...x:.:..:x.x....:x:.....-----------------..........x:::.x.:....:..xx..x:...x..xx.....x-------------.x:.x.......::....:..x......:...xx..:x.:...xxx.xx.:.....x:x:.....::........x:xx.:...x.-----.:.:x...:xx..::x:...x...:xx..::..x.:x.:.x:---.......x... 38M1D34M5D55M12I16M7D83M1D28M17I45M13D86M5D42M3D11M 276/438 63.0% 467/94230402 0.0% 64/438 14.6% 137272563 52941992 +3018 chr4 + 190214555 161104385 161104384 161104439 55 TAAATATGTTTCTTTTTTGGTTTTTATTGTTGTTTTGTTTTGTGCTTTGATATTT chr4 + 94230402 52653426 52653425 52653480 52653426 52653425 52653480 55 TGAACATATTTGTTTTCTGCTTTTTGTTGTTGTTTTTTTTTTTAATTTGGTACTT .:..:..:...x....:..x.....:..........x....x.:x....:..:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 108450959 81763596 +3376 chr4 + 190214555 161120100 161120099 161120158 59 GCACCTGTAGTCCCAGCTACTTGGGAGACTGAGGCAGGAGAATGGTTTGAACCCAGAAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::..:.....x.xx.x...xx::............. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 85086894 NA +12871 chr4 + 190214555 161146237 161146236 161146686 450 TTAACAGAAAAAAAAATTGTTTATGTTTCTATGTCCTTCATTAGTGTGTTTTACTATGATCTTAGGACAAAAATTGAAGACAGCGTTTCA--GGTCCCCAAAAGGTATTAATGTATATCCTAAGTTCAGAGTTTTCATTTT-ATCAACTCAGGCCTAAGGCAGTAATAAATCATCTCACAAATAGTACACTGAATAAAAGATAAGTACAAATATCCCTAGGATCAATTGCCTGGGGTTTTATCA----ATTGTAA-TATTAATATAACCTAACTGTAATGTCATTTATAATTAGGTTTAATTACCTAAA-----------AACATAACAAAACACAA---TAACGT----GTATTTTTTAGCTTATATA----ATAAAAATTATGCAAGTTATTTGGCAAATACAGACTTTCAGCAGAAACTATTTGTTATTGAGGTTAGATAATAAGATAGCCATTTGAACTCCACATTGACAGTTTTA chr4 + 94230402 23828576 23828575 23829034 23828576 23828575 23829034 459 TTAAAAGTGAAGGCAAATGTCTTTCTTGTTA---CATTCATTCACACGTGTGATTGTGGTCCCGGGGCAAAGATAAATGACCGACTCTTGTGGATCACCAA----TTTTAATGGAAATTGTAAGTTCAGAGATTTCATTTTTACCAACTATGGCCTGCAGCAATAATACATCATTTT-CAAGCAGTGCACTGAATAAAAGATAAGTACAAATATCACCAGGATCAATAGCCTGGGGTTTTATCATTGTACTGTAATTACTAACATAATTTAGCTATAATGTTATCTAAAAATGAGTTTAATTACCTAAAGGGAATGGAACAAGGAAACAGAACACAAGTTTAAAACAAAAACATTCTCTCCCTTAAAGAAAACATAAATATT-----AAATATTTGGT--GTTTGTTTGTTTATCTGAAACTATTTGCTA-----ACCAGACACTGAAATTTCTATTTGATC-CAACATGGTCAATTTCA ....x..x:..::x..x...:.x.x..x:..---.x......x::::..x.x.:.:..:..:::..:....:..x:.x...x.xx.:.::--.:..x....----.x......x.x..:x...........x.........-.:.....xx.....:x:...:.....x.....:.:-...::...:............................x.:.........x................----.:.....-..:...:....::..:..:......:..:..x..x.::...............-----------..x:x....:.......---...x::----::...:.:.xx....x.x.----.....x...-----.:x.......:--:.x::xx:x..:.x.x...........:..-----:::...:.x.:.:..xx.:......x.-.x....x.x..:...:. 31M3D56M2I9M4D36M1I35M1D66M4I7M1I53M11I17M3I6M4I19M4I9M5D11M2D30M5D27M1D17M 308/429 71.8% 459/94230402 0.0% 51/429 11.9% 137317661 52896894 +13178 chr4 + 190214555 161173216 161173215 161173594 379 TAGGGAGTGTTTAATATAGTATGCTAGTTATCCCAG--TGTATTCT---ACTGTGACAAGACAAATTTTACTTTGATATTTT--CCTGAGTTCATCTACAAGAGAAAGG-TAATTAAAAATGAAGACACAATGCTTATTCCCATCACAAATCATACTTTATTGTAATGCATACTTTT--------AGATACACATTTAAAGGGTATCCATCATAAATTTTTATGTTGTACATGAAAAAAGTGGGTAATATTCCAAATAGGTAATAACTTTACAAATTGTATGGAAATGAATGGCACAAATGCGTCG-GTACTGCTTCATTTTAGAAACACACAGCAGTAAAATTCATCACTTAGGAAGATTTTTATTCAAATGCCTATGTGCTCAGAATTCTTCCT chr4 + 94230402 23834003 23834002 23834382 23834003 23834002 23834382 380 TAGGCAGATACCAAGATGGAAAGCTAGATGACAAAGCATCTATTCTTAAACTGCGGCA-GACAA--TTTACCTCAATATCATAACCT----TCATTGAAAAGAAAAAGGATCATTAAAAAGGAAGATGTGACTTCTACTCTCTTCACAAATCatattttattattattcatattttttttCCCCTACATGGGCATTTGAAAGGTACACATCATAAATTTTTATGAT-TACATGAA----GTGGGTAATATTCCAAGAAGGTAATAACTTTATAAACTGTAGAGAAATGAATGG--CAAGTAGATTGCTTGCTGCTGACTTTTAGATAAACCCTCCAATAACATCAATCACTTTAAAAGGCTTTTATTCAAATGCT--TGTGTTCAGAAGTCTTCTT ....x..xxx::..x..:.x.x.....x.:x.xx..--.x......---....:.:..-.....--.....:.::....:x.--...----....:x.x....:.....-.x........x.....::::.:x::..:..:.x............:......:.x..x....:....--------.x..:x:.....:..:....:x.................x.-........----................:x..............:...:....x:...........--...:.:x:.:.-x.:.....xxx.......x.x..x.xx..:...x..:x.......x::...::..............:--....:......x.....:. 36M2I8M3I9M1D5M2D16M2I3M4D18M1I67M8I41M1D8M4D54M2D11M1I68M2D19M 275/363 75.8% 380/94230402 0.0% 33/363 9.1% 137339213 52875342 +3119 chr4 + 190214555 161209357 161209356 161209446 90 TCCATCTCAAAAAAGAAAAAAAAAATCAAAACTTTAAAACATTTTTCCCATATTTATTGACAAATTAAAACTGTGTATATGTAAGGTTCA chr4 + 94230402 43238363 43238362 43238450 43238363 43238362 43238450 88 TCAATCTAAAAAAAAAAAAAAAAAATCTGTTTTTTAAAACATTTTTCTAATCTTAAC--ACAGCTTTGATTTTTGCACTTGCACAGCTCA ..x....x......:............x:xx:...............:x..x..x.:--...:x..x:.x:.x..:.:x..:.x:.:... 57M2D31M 61/88 69.3% 88/94230402 0.0% 2/88 2.3% 117970994 72243561 +3045 chr4 + 190214555 161255630 161255629 161255696 67 GTGTTTCTGCTTTTTTCTGTCTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCCTATCTGTTTTTTTCT chr4 + 94230402 14667812 14667811 14667878 14667812 14667811 14667878 67 GTGCTTCTACCTCTTCACCTTTCTTTCTTTCATTTTTTTTGTTTTCTTTTCCTGTATATGTTGTTCT ...:....:.:.:..:x:x.:.:...:...:x........x...x........:.x.:.x..x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 146587818 43626737 +3845 chr4 + 190214555 161267479 161267478 161267548 70 AGAATATGGGTTTTTCTTTTTTTCTTTTTTTTTCTTTTTCTTTTCTTT-----------------------TCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 81168740 81168739 81168832 81168740 81168739 81168832 93 AGAAAATGACTTTTTCTCATTTTCTTTTTTTTTTTTTTCCTCCTCTTTCTCCCATTCATTTATTGATTTAGCCtttttttttttttttttttt ....x...:x.......:x..............:....:..::.....-----------------------:..................... 48M23I22M 60/70 85.7% 93/94230402 0.0% 23/70 32.9% 80098739 NA +3272 chr4 + 190214555 161274392 161274391 161274505 114 TAAAGAAAAGTAGTAGCTATTACGGTTTA-----------------AAGAAATTATTGCATAGAGATTGCATAGAGGATTCAAGAGGGACTGCAATGACACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 87355288 87355287 87355418 87355288 87355287 87355418 131 TAAAGGAAGATTCTAGTTAATACAATTCTGGCAAAATCTTAAATATAAAAACTTATGGCTTCAAAATCAGGAAAATAATTGAAGAGAGACAAAAATTGCACTTTTTTTTGTTTGTTTTGTTTTGTTTTTTG .....:..::.xx...:..x...::..:x-----------------..:..x....x..x.x:.:..::x:x.:.x:...x.....:...x:x...x:...:.......x...x....x....x....... 29M17I85M 76/114 66.7% 131/94230402 0.0% 17/114 14.9% 73919104 NA +3223 chr4 + 190214555 161276130 161276129 161276296 167 TATATATGTTTAACTCTGCAATTGTAAATATGGAAAGAAATTGGTAAAACATATTTAAAATAAATCAATTATTTGTCAATTATATGTTTTACTATTGTGCTTTACTTAGGTTTAGTATTAATAACTCATTTGATATTGTTGATAAGCTTATTTCTACACAGCATACA chr4 + 94230402 43363955 43363954 43364085 43363955 43363954 43364085 131 TGTGTATGTTTAACTCTGCTATTGCAATTATGTAAAGGAATAATGAAATTACAGTGAAAAAAAATAAA---------AACAGTTTATCTCA--------------TAAGGTTTAGCCTGAAAA---------ATATTGTTGATAA----AATTCTAGATAAAATGCA .:.:...............x....:..x....x....:...x:xx...x:.:.x.x....x....x..---------..:x:.x.:.:.:.--------------.x........:x.x..x.---------.............----.x.....x.:.:x..:.. 68M9D14M14D18M9D13M4D18M 95/131 72.5% 131/94230402 0.0% 36/131 27.5% 117912175 72302380 +3083 chr4 + 190214555 161287965 161287964 161288011 47 GGGAGAGAAAAAACAAAACAAACAAAC--AAAAAAAAACAGAAACATTT chr4 + 94230402 73441380 73441379 73441428 73441380 73441379 73441428 49 GGGGAAAAAAAAGCAAAACAAACAAACAAAAAAAAAAACAGGAACTTTT ...::.:.....:..............--............:...x... 27M2I20M 41/47 87.2% 49/94230402 0.0% 2/47 4.3% 87846585 NA +3469 chr4 + 190214555 161287965 161287964 161288011 47 GGGAGAGAAAAAACAAAACAAACAAACAAAAAAAAACAGAAACATTT chr4 + 94230402 73435912 73435911 73435958 73435912 73435911 73435958 47 GGGGGAAAAAAAGCAAAACAAACAAACAAAAAAAACCAGGAACTTTT ...:..:.....:......................x...:...x... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 87852053 NA +3270 chr4 + 190214555 161289650 161289649 161289737 88 AAAAAAAGAGAAAAGAAAAGAAAGAAAAAAATAACAATATACCAATGAAGGAAAGAAGAGAAAATAAAATTATGTAAAATAT--TCCATC chr4 + 94230402 24148911 24148910 24148998 24148911 24148910 24148998 88 AAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGACAAG--TATTTTAAATATCCTCCATC ..::...:.:....:..:...:...:.....x.x..x.:.::x.:..:.:....:..:.:..:.:..:--...x.x......--...... 68M2D12M2I6M 60/86 69.8% 88/94230402 0.0% 4/86 4.7% 137140739 53073816 +3970 chr4 + 190214555 161315385 161315384 161315467 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 8M2D73M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 85282188 NA +3069 chr4 + 190214555 161317471 161317470 161317542 72 GCATCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:x....:.:.........::.:........x.xx.x...x::........::.:..x:xx:..:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 85284265 NA +3354 chr4 + 190214555 161323653 161323652 161323716 64 CTTTCAAAATACTGGAGAAAGGTTTTACTATTAACGTTTATTTATTTTATGTGGTCCTACAATA chr4 + 94230402 33543185 33543184 33543248 33543185 33543184 33543248 64 CTCCTGAAACATTTGAGAAAGGTTTTATTATTAACTTTTATTCCTTTAATGAGTTCCTTTAATA ..::::...:.:.x.............:.......x......:x...x...x.x....x:.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 127780468 62434087 +3168 chr4 + 190214555 161350141 161350140 161350214 74 GTGCTCCTGTAATTCCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTCAAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:...........:::.........x.xx.x...x::..::....::.:..x.xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 85316937 NA +3183 chr4 + 190214555 161367696 161367695 161367765 70 CATGGTGGTGTGTGCCTGTAGTGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGATCCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......:::.--......x...........::........x.xx.x...x::.....x...:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 85334499 NA +66160 chr4 + 190214555 161383867 161383866 161386925 3059 ATATTAAATCATTGACTGAACTCTCAAG-GGTTAAAATGTAAGAGGTTTATTCTCCTTTTATCAAGCAGTGTCTACAGACAGAGCATCCACATGGTGTAAGCTACAAAAGAAGGATGTATGCGACAGACTTACATGAAATCATTAAGTCACAGACACTTTATATGGTTCATGTT----CACAA-GGAAGAAAATTGCTAAAAAGTAAAGCAGATTCAATAAGTAGAAACATAAGCTGATTTTTGTTGTTTATTAAATCTACCTCGCA-------TGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGGATGCTATATACACATAAGATATTACA-CACTATAAAATTTCAGGTTTCTAAGCAGTTTTATACAATTTAAACTTGAGTAAAATTTGTATATTTAAAAAAGACC----------------TTATTGGATTACCTTAAGTAAATGGAGGTCATTTCAACAGCCCATTAACATTTTTTTGCAACAATAAAAACAAAAATAAGTACAAGGATTTTCAAAACATGTAAGCTATTACTTTAAGCCTGGATAATTATCTGCT--TATTTTAATAAACCAGCTCTCTAGTTTTAATCTACTTCTGCTGGCCTTCTCATTTCCTCTT-----------------------------------------AAAACAAAACAGAAGCAACAATTTTTACTTTTCTACAGTGTCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTTTTAGGATTACAAGAAGATGGATAAAAGGAATCATTTGTGGAAATTTTAGAATAAAGGTTTTTGATACAT------------TATATTTAAATAGCAAAAACAATGGAGTACTACATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCTAAGCCACTAATACCTCATCAATTCTCTTGCCAGTT-----------TTCTTTTCCTAGGTGTTAATTTCCCTATATATGGTTTACTTTAGCAGACAAAAGTAATGTTTCTTTTT--TAAAACCGAAAGTTCCTGATGATGAAACATTGGACTATATGAAAAGA--AACA-ATCTATTAATAAATAATCTATTCTGCTAGTAATAAACATCTGTAGGCAGTTGACATCCCAGACAA-ACTTGCATTAAAAACA----TAATGCACTCTAGTGATTGAAAGCAAAATGAGTAGATAGATTGCAAATATTTTGACTGTAATTATTTTTCCTCCCTTCCTCCCCACTTTCTATAGCATGCTGCAG--ATTATACAGTAAATGTCAAGTGGAGTTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCAAGAGATGTTTTTTAACAACAAGAGATTTATAGTTATGAGAGCATTTAGTATGCAGGCTTTAGTCTTCCTTTTCCTCCTGTGACATTCCCTTCAAGGCACAAAATATTATAAACAGTGGACAGGACCGAA----------TATTTTGAATTAAGAATTTTAAGTTTCCACAACACCTTTTATTTCTTGTTTAATCATACCAAAAGGACAGAGAAAAAAAATAAACTACCCTCAAAATGAAAT------------------AATGCTTTATGTCATCTGAAATTCCCTGCAGTTTAGTTTTTTAAATGATTTAAATCCTACTTTATTGTTTAAAGCATAATTTACATATTTGATTCTTGTGACTGATGTGATTTCTCATTAAATATTGTGCTGAGTATTTCTAATTAACCAATATAAT---------TAATTG------------------------TGTATGTCTTAGTCACTTA---GTCAAAAACAATTTA--TTTTATTTGGACCAACCAAGTAAATTTTGTTTGACTAGGATATAAACTTGGAAAGTTAAGTTG---TAAATTTAAACAATG-----GATTAAGTGCAATGTATTGTAAAACGCTTCATTCAATAATTGT--ATCGTAGGGTTTTTAGGCATCTCCAACCCAAATGACTGTATTTCCTTTTTCAACTTCAGTGATCTCACAGTTTAATTTATTGAGTCGTCCATCTAGGATGAAGAGAGAGTCCTTGGAAGGTGTCATCAGGTATTGACCAAACAAGCCACTGTCCTGGATTTGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTGCCTTGAGTGGTTCCTTGAGACTCTTTATCATCTTGACCTTCCCAGAAGAGAGCTCCACAAAGAGCACATCAGTTTGTGTGCTTGAACTACCGTAGATGTTATATTGGTGGGCTTCAGTAAAGGATGGTTGAAATGCCAGATCAGATATGTGCAGATTTGTGTAAATATCAAAAGCCTCCTGTATTTCTCCTCTGATGGTAATGTACTGAACCCTTACAAGACCTTTCACATCATTAATGCTGACAAGGTAGTGGCCATCTGGAGAGACATATGGAGTGCCCGTCACATCACTATTGAACCCAATGACTGAGTCAGTTACACCGTCCACCATGACCTGTGGGGAAACTGCTCCGGTGCTGTCAGGTTTGCAGCCAATGAAGTAGTAGCCTCCCAAGTGTGTATATGCCAATGACTGAGGAACGCACTTATAGTCCTTCAAGTTAATTGTCTTGATGTATGACATGGTTTCAAGATCAATTTTTTGTAGTGCAGCTTCATCTTTATGAAGAATAAATCCAAACCTGAAAAAAATGAAAATCAGAGTTAGACAGGAAGCAATGGAGTTTTTAGCCGTAAGAAAAAAACTAGATACAGGTGGAAAGGT-CCATCGCAGGCTCTAATTGTCAGGCGAGGCAGCA--------------ATTTGTGTTACAATTGTGCTAGAATTAA---TCTGTAGATTGTGCCACTCTCCTTCTTTCTCTAGGTCATTCTTTCATTACATCCAAATCATCATAACTCATGCTGTAGAAAGAAAAATAATTAAAAGCAATACATCTAGTTAATTGCAGCAACAAATTTTGCTTTTA-ACATAGTGGAAAGAAGAAGTATACATTATTCTGTAAGTCTCTAGACCATGTAATATTAAATAAGCTTGGTTAACTATTGCCAAACCCAGCAAGAGTAAAAGGCTCGAATATATATT----------------------------GGTTTCACTCATTTCAT-TTACTTCTTATATTGTTTTTTGACCATTAAATAAATCTGACACTCATCATTATTTAGATAA chr4 + 94230402 23885203 23885202 23888107 23885203 23885202 23888107 2905 ACATTGGAGCATTCACCAAAATCAGAACCGTTTAAAATTTATGGGGTTTATTCTTCTTTTATCAAGCATTTTCTACATACATAACATTCACGTGGTGTAAGATACAGAAGAAAAATGCATGAGACAGA-TTACTGCAAATAAGTGAATAACGGACAGTTTACACGATTCTTGTTTGTTCACAATGGAAAAAAGTTGTTAAAAAGGAAAACAGATTCAGTAACTAGAAATGTAAGCAGACTCTTAAT-TTAATTAAATCTACCTACCAGGAGATTTGCTCAAGCTACAGAGAGATTTACTGTATCACAAAGGGCAGGATGCTAAATGTACACAAGAT--TACAATGCTAGAAAATTCCAGATTTCTAAA----TTTACACAATCTAAATCAGGGTAAAATTT---TGTTTAAAAAAAGTTGGttttttttttttttttttttGATTGCCTTTAGTAAAAGGAGGTCAGTTTAAGAGCTTATAAGCATTCCTTAGCAAAAACATAA-TAAAAATAAAAACA----CTCCCAAA---------------CTCTAAGTCTGGATAGTTGTTTACTGCTGGCTTTCTTATCCTATTAACTATTGTTATTTTATTTCTGAGAATCTCATTTTTTCCCATTTAGATGTTTACTCACCATTAAAATTAGAATTCTAAGTTAATAAACTATAAAAAAATACAAAGTTTTTGTTGTTAT----TGTT---GGTGGTGGGCTTTTTTGTGTTT----------------------------TTTCACTAGTCCAATTGGATGCATGACATAGAAAATTTGTTGACTTATCCAAATAG-----TTTAATAAATATGCATCAATGGTATAATGAATAAGCAAAAATATTAT----CTACTTGTTAACTT-CAATTCTCTGAGTTTCCAGCT--TCCTAAAATGTAT-ACATATTTTTTAAA-------------TATCAGTATTCTTGTCAGTAAAAGTAAAGCATTGTGTAGTCAGATATTCA-------GAATTTGGTTACTTTGAATAGGTAAATGCAGTGGTTCTCTGTAGTGGAACTCAGACTCCTTACTGATGGAACCCTGTGAAAGCTGAAAAATCTAACatatatttaaaaaaaaaa--------gaaaaaaaaaaCCATCAAAAAAACCCAGCTCTCTCAAATAAGACTCACCATAAAAATAAGCTTCTTGAATTGCACTGATCAGAAACC-----------TGCACTGCAAATATTTT-------------TTTCTTTTTTCTCTTTCTATGTCCCAAAGCTTGAGACAAGAATTTGATAGTAAATGTT--------------------------CCT---------------CTCCAAT----------------GTCAAGCAA--------------------------------TCCTGTAGCCACAA--------------TGGGAATAAGT--TATACAATTTCTATGCTTTACCTTTCTTGTGAGACTTTCACTTCAAGGCACGAAA-ATATTAAACAGTGAACTGAACAAAACAGGACATCCTATTTCAGTTTAAGGAGCAAAAAGTTGTACA---TCTCTTATTTTGTGTTT--------------------GAAGCAAAGCAAACCAATATTTGAATGATATTCAATTCTTCCATTTACAAATGCAAAGTATCATGTTAAATTCCCTGAAGCTTTATGTTTT------TTTCAATT--------TTCTTTAAAGTA------------------------ACACATGGTATTTGTCATCATTTTCAATATGTAGTAATTCCAGTCAACCAATACAATCTTGGCTGATAATTAATAAGGCTACCATTAGCAAATAGCTGT-TGTTTTAGTAACTTTTATGTGGAAATTGACTCAAACTGCATTCAAGTCAAAGAAATA---TCAGGCATAGAAGGGCTTAACAATTTCAAATGAAATTGGTGTAAATTTAAAGAATGCTATAATTTAAGTGCAACATACTGTAAAACTATTAATTCAGCAAATATTCAACATAGA-TCCTTATGCTTCCCCAACCCAAATTACTGTGTTGCCTCTCTCAACTTCAGTGATTTCACAATTTAATTTATTGAGCCGTCCATCCAGGATAAACAGAGACTCCTTGGAAGGGGTCATGAGATACTGACCAAAAAGGCCACTGTCTTTTATAAGACGGTTCTTACTGTTCCAAGGCCATTCGCCTGCCCTGACAGGCTCCTTTAGACTCTTCACCATCTTAACCTTGCCAGAGGAGAGCTCCACAAAGAGAACGTCAGTTTGTGTACTGGAGCTACAGTAGATGTTGTATTGATGAGCTTCAGTGAATGATGGCTGAAAAGCTACATCAGATATGTGCAAATTTGTGTGAATGTCAAATGCATCCAGTATTTCTCCTCTCATTGTTATGGTCTGGATCCTCATGAGACCTTTCGCATCATCAATACTGACAAGGTAGTGTCCATCTGGAGAGACGTGAGGTCTGCCTGTTACATCACCATTGTATCCAATCACAGAATCAGTAACACTATCCACTATAAGTTGTGGTAGAACAGCACCAGTGGTATCAGGTTTACAGTAGATAAAAAAAAATCCTCCAAGATGTGTATAAGCCAGGGACTGAGGAATGCAATTATAATCCTTTAAACTAATTGTCTTGATGTACGACATAGTTTCAAGATCAATTTTCTGGAGCACAGGCTCATCTTTATGAAGAATAAATCCAAACCTGGAAGAAA--AAGCACAAAGTCAA--AGAAAGAATTG----TTGTATGCATCA---------TGTACAAATGTGGAAAGGCAATATAACAAAGTACATGAGTTAATACTTGCAGCAGTGTACAAATACATATTTTAGCTTCAGATGTTTCAGAGATGAAGCATTTTATATTATTTAATTTTCAGTGTTCTTGCA------------ATTATATTT---------TAAATTGTGCC----------AAATGTCTAAAAAACATTTCCCTGATTAATTG--GCAGT--GTTTTATTTCTATAGACACTGGGGGGA--AAGTAAACATTACTCTGAATACCTAT-------------TCAGTTAA--------AACTTTTACAAAAGCTAGGAGGaaaaa--------aatatatattaaatatCAATAGATAATACATCCCACAAGCTTTTATTCACTTCACATTCCTTTTTCAACTTTCTTGGGAACATCAGCTTTATCCAGTGCTCATTGTTATTCAGATAA .:...::.x....x..::..x..xx..x-.x.......x..x.:..........:.............x.x......x...x.:...:...:.........x....:.....::...:...x......-....xxx....x.x.:.:.x..:....x....:.:.:...x....----.....-....:...:...:.......x...:........:...x......::.....x..:.:..:x.-..x.............xx..-------..:.:xx....x::...:..:............x..xx..........x..::...:.....--....-::...x......:...:.......:----....:.....:....::x.:.........---.:.........::::----------------..x..x....:....x......x........x..:..x...::..x.:....::..x....x..:.x..-:........:x...----:.::....---------------..:....:.......:..:.:.:..--.:x:..xx.x.x..x::.xx...x.x...x.:..:.....xx:::..:x.:x.....:x..-----------------------------------------...x:.x..x.:..xxx.x.:.....::.x..x.----...:---:..:.x:..x..:x..:x....----------------------------...:.xx.x.x...xx:....x..:.x.x::.xx......x..xx.x.:x:....:-----...:...x..------------....x.x..xx........:.x.:x----....x.x..x....-.x.:.x..x.:x.x:..xx:.--...:..xx.:...-..xx...:..:x..-------------:....:.x:.....:....x-----------..x.x.xx::..:.:..x.-------:x..x.....xx:..x.::..::...x.:.:..x....:.x.--.::...:x.:.x.:.:.:x.....:...x:..x:xx.xx......:x--....-..x.x.x..x...x..--------.xx.:x..x..x....x:x.::xxx:x.x:x..:..:.:..-...::.xx......:.----.xx..x.:.x:.x....:::..:.x-----------.:x.:............-------------....:.:::.::..::.:.:x.:.:.x...x..xx:..:--...xx.:.........:--------------------------...---------------..:....----------------..:..:...--------------------------------.::.x..:.x....--------------..:..::.xx.--...:..:x:.:..xx...:x::..:..:x..x...x...x...........:...-..xx.........:..x.:..x:..----------.....:::x.....:.x:xx..:x..x:...---:..:......:x.....--------------------...:x...::....:.x:x.:x:.....x..------------------.....xxx:.:....x.x..........x..:..x:.x....------...x...:--------..x.......:.------------------------..xx...xx....x....:.xx.x:x:.::xx....x...:.:.:........:...---------.....:------------------------...-...:.....x....x---..x:...x::.:.:.--:.x:...:::::...xx..:..---.:x.x:xx.xx...::x...xxx.xxx..:.x..:...---..........x....-----:x..........::..:........xx..x.....::..x.:.--.x.:...:-.::...x..x..:...........x.....:..x...:.:..............:.....:..............:........:.....:..x.....x...........x.....x..:..:........x.:.........:.xx..xx.x.x...:..x.x...............x:.....:...xx..:.....x........:.:......:.....x.....:.................x..:...........:..x..:....x.........:.....:..:........:..x.....:.....x..:.x..............:........:...:.....x..x...x.............x..x..x...xx...:.:...:.::.........:......:...:..............x..............:.:x..xx....:..:.......:....x.:.....x..x..:.....x....::.....:..:.x:.....x::...x..x..:...x.:........:...:x:..:..:x.:x.x.....x.::........x....:x..........:...x.....:.....:..::................:.....:.................:..x..::...x:..............................:..:...--..:xx..:...:.:--..:...x.x..----..x..xx.:.x.---------.:x.:.x.x.........:-x:..x:..::x.x:.xxx..:.:xxxxx......--------------....xx.:.x..:x...x::...:x.:.---x:.x..x...:.x:x.:.:..xx.x..::.x:.------------....:..::---------...x.::...:----------....:x:.....:xx..x:x:..::.......--...::--:....::..:..-.x.:.x...:::..--.....x......:....x.x::..x.-------------.:.:x...--------....x..:.x...x.:..x.:..:x..--------..........----------------------------.x...:.:...:....:-..x...:..xx.:.x.:..xx..x...:.:x.xx...:::::.....::.....:...... 28M1I99M1D45M4I5M1I62M1D20M7I62M2D4M1I25M4D29M3D15M16I69M1D14M4D8M15D25M2I61M41I34M4D4M3D22M28D56M5D10M12I25M4D14M1D21M2D13M1D14M13D20M11I19M7D42M2I47M2I4M1I16M8D41M1I16M4I25M11D17M13D39M2I17M26D3M15D7M16D9M32D14M14D11M2D55M1D25M10I31M3D17M20D31M18I42M6D8M8D12M24D57M9I6M24I3M1D15M3I15M2I22M3D38M3I15M5I43M2I8M1D716M2D14M2D11M4D12M9D19M1I34M14I28M3I33M12D9M9D11M10D32M2D5M2D12M1I14M2D26M13D8M8D27M8D10M28I17M1I61M 1870/2673 70.0% 2905/94230402 0.0% 618/2673 23.1% 137498664 52715891 +10371 chr4 + 190214555 161388892 161388891 161389375 484 ACAATCTAGCTACTTTT-GGAAGTAATTAAAAATTTAAAAAAATGGTCCAGTTAAAAATGCAGAAGATCTTTGTGGGGTGATAAAATTACATCTATTTTAGCATCTGCATTGTATGC---TCCTTTAGGGCTGGAGATGTAGCTACATAAGCAG--ATGCATGAGAATGCCTGCAATTTTTCACTGCTGATTTATTGATTAGGAAGTGGTGTCTCTAATTCAAAATTTCCCCTAGTACAGATTGATATTCAGAAGTCTCCCACTGTTCATTAGTCTCTGATTAATATTTACGAGGCTCTCAACTTTCATGCCTGCTTAGTATAATAAAATCCTGCACAGTATTAGGCCTAACATAGTTTGTCTA-GTATTTGTCAGAATGTGTACAG-AAAGTTGC--------AGACTGAGAAATAAGAGAGTTAAAATTGACTCTCAAAATTACTGCTTTTTCTAGGAAATTAATGCCAATAGAAAAGTGTGGGCTCTCAGCATAGCA chr4 + 94230402 23891466 23891465 23891938 23891466 23891465 23891938 473 ATAATCTAATAACTTTTCAGAAGCACTTAG---TTTTCCAGAAGGATTAA---AAAAATACAGCCACTCATAATCATGCAATGAAATTGTGCCTGTC---GCCTTTGTGCTGTTAGCCTGTTTTTTATGACT----ATGCTGCTGGAGAACAAGTGATACTTTAGAGTAACTTCACTTTTCC-CAAATGATTTATACAT-AGATGGCAGTGTGTTTAATGCAAAATTTCTGCTTATATAGATTGATATTCAGAAGTCTCCCACTGTTCATTAAACCCTGATCAATATTTATGAGAATCTCAACCCTCATGTCTCTTCTATGCAGTGAAATCATATACAATATCCGAC-------AGCCTATAAAGGCATTTGTCAGAGTGCATATTGTGAACTTGTGCAATTCAAGCCTGCAAGATATGAGAGCAAATCTTCACATTTCCAATTCTTTATTTTAC-----AGTTTATGCATGTGGGAATCTGTAGCCTGTGGGCATAACA .:......::x......-:....:.x...:---...xxx.:..x.:.:x.---......:...xx:x..x.x:.x:x.::..:.....::::..:.:---..x.:..:::...xx..---.::....x.:..----...:x...:x.x..xx..--..:.x.x...:.:x..x..x....:.-.x:x........xx..-..:x:.::....x.:....x.........:x..x:..:..................................:x.:.....:........:...:x.......::.....:..x:.:x:.::.:.:.....x.::...:...:x.:.-------..::.:.xx.-.:..........:..::..:x.-:..x...:--------..x...x:.:...x.....:x..xx..x..x:.:xx....x:.xx....x.-----.:..x....xx:.:.:..xx...:.x..x.x:.....:.. 17M1I12M3D17M3D44M3D17M3I12M4D18M2I26M1D16M1D147M7D10M1I22M1I8M8I51M5D40M 301/457 65.9% 473/94230402 0.0% 43/457 9.4% 137497426 52717129 +3019 chr4 + 190214555 161401481 161401480 161401533 53 TTTCTACAAATGGAAAAGTACATATACCTAGTTGTTTATTTTTTATTATTGAT chr4 + 94230402 22627757 22627756 22627809 22627757 22627756 22627809 53 TTTTCCCAAATGGAAAAGGACATATAATTTGTTATTTAATTACTATTATTGAT ...::x............x.......x:.x...:....x..x:.......... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 138773724 51440831 +3089 chr4 + 190214555 161413239 161413238 161413356 118 TGAATAGACACTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGACACACAAGTGGCCAAGAAGCATATGAAAAAAAATGTTCAGCATCATT----AATCATCACAGAAATGCAAA chr4 + 94230402 79620270 79620269 79620384 79620270 79620269 79620384 115 TGGATGGAAGCTTCTCAAAAAAAAAAAAAAAGGCAAAAAAATAAACCCAAACTCAAATATATCTAACAACC---CAAAACAAAA----CAGCCCCATGCTGAAAACAGCATAAAATTACAGA ..:..:..x:.....................::x.......x...:xx.:..x..x.x:.:x.:..x..x.---::...x....----....x:...x----..x..x..:.:..x.:..:. 71M3D10M4D10M4I20M 77/111 69.4% 115/94230402 0.0% 11/111 9.9% 81792969 NA +3208 chr4 + 190214555 161421210 161421209 161421348 139 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATGGCATGAACCCGGGAG---------GTGGAGCTTGCAGTGAGCCAAGATCGCGCC-----ACTGCACTCCAGCCTG--GGCTACAGAG----------CAAAAGACTGTCTCAAAAAAAA chr4 + 94230402 76033204 76033203 76033367 76033204 76033203 76033367 164 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGA ......x......:.........::::........x.xx.x...xx:.x.......:.:..---------..:..:.x..xx.:x.:x..::xx:.:...-----x....x.-.....x..--.:..:.....----------..x...:......x.::.:.:. 61M9I30M5I7M1D8M2I10M10I22M 95/138 68.8% 164/94230402 0.0% 27/138 19.6% 85388006 NA +9313 chr4 + 190214555 161454964 161454963 161455140 177 ACAAATCTTTAAAAAGTTGATCACTCAACTTAGC----ACTTACCTCATATGGGTGATAATGAGTGTTGTGGTGGGAATGAAAAAATCATCCACTCTGTCAAATTGCTTTCCCACTGGTTGGGTGTGGATCGTGTGGTGAGGCACATTCCCACTGGCCAGGGTAATTACCTAAAGAGAACA chr4 + 94230402 23901306 23901305 23901484 23901306 23901305 23901484 179 ATAATTCATTTGAAAGTTAAATAT--AACTCAGCCAAAGCTTACCTTATATGAGTAATGATGAGGGTTGTAGCAGGAATGAAAAAGTCATCCACTCTGTCAAACTGCTTTCCCACTGGCTGAGTATGGATTGTGTGATGAGAAATACTTCCACTAGCTTGTGTTATCACCTACATAAAGTA .:..x..x..x:......:.x:.:--....:...----:.......:.....:..:..:.....x.....:.::...........:.................:..............:..:..:.....:.....:....:x.:.:.:.....:..:x.x..x..:.....x.x.:.::. 24M2D8M4I143M 133/175 76.0% 179/94230402 0.0% 6/175 3.4% 137553658 52660897 +8550 chr4 + 190214555 161459201 161459200 161459521 321 AATGTACTTACCTGTAGTGTTGGTGATGTCTTCTCCAAGGTACCCCAGCTTAGCACCCAGACCTGATCATGTGATTTGTCATAGTGTAATTTAACTGGGACAGGGTCTGTGCTCACTGCCTACAATAAAGAAGAATTGAAAAA--------------AATGTTTTAGACTAAACT----------ATTAGTTTAAAGCTA-GGCCAGAAATTATGAAGATTCTAATTTAGATGTCAGATTA-----AAAATTTAATTTGCCAAATATATAA-------TTTCCTTAGCCC----TTATTTGATATTTGAAAATATCATACTTTACTCATGTATATTCATAT---ACATGAATAAAGTATTATCTT chr4 + 94230402 23903004 23903003 23903360 23903004 23903003 23903360 357 AATATACTCACTTGCAAAGTTGGTGAATTCTTTTCCATGTTTCCCCAGCTCTGCACCCAGACTTGATCATGTGATTTATCATAGTGCAGTTTCACTGGAACAGGGTCTGTACTTACTGCCTGCAAGTATAATAATATGAGAAATCCTCACTCTTGATCATGTTGAAAAGAAAAATAACAGATATGATTGAATTAAAACTATGACTAGA---CATGCATATTCTGAT---GTTTTCAGATTATATTTAAAAATTACATTGGCAGATGTTGAAACAGACCTCTGATTAATTTAAAGTCATTGAATTGCTGAAACTGTGAT--TTTTATTATGTGTTCTAATATTTGACATCAAAAACACGTTATGTT ...:....:..:..:.:x........xx....:....x.x.x........:x..........:..............:........:.:...x.....:...........:..:.......:...xx.x:.x:.xx...:...--------------x.....xx.:.xx...x.----------...::x.....:...-.:.:...---:...x.x.....:..---.x.x........-----....x...xx...x..:..:.xx..-------.:.xx...::::----.:...x:..xx:.....x.:.x..--...xx.:....:.x:.x....---....x..x..x:::....x.. 143M14I18M10I15M1I7M3D15M3D12M5I25M7I12M4I24M2D21M3I21M 224/313 71.6% 357/94230402 0.0% 52/313 16.6% 137556197 52658358 +12555 chr4 + 190214555 161466375 161466374 161466578 204 GCAGCAAAGATACACAGAACTTGCGGTTTGGTCTTGACATGAAGGAACAGTGAAGCACAGCTTGTTTATCAGTCTGACAAGGAAAGTACCAGCTGGCTAATTAAGTGAACCTAATTTAAAATAATGATGCAG-TTCTCAAGATAATACGCTAATGGCTGGAGGAGACTGCTGATAATACTTAAGAGTACTCCCGGGGTGTTACAA chr4 + 94230402 23903864 23903863 23904068 23903864 23903863 23904068 205 GCGGCAAAAATAAGTGGAAATTGCTTTTTAGTCTCACCATTACGGAGCTGTAAAGCACAGCTTGTTTATCAGTTTGTCAAGGAGAATACCAGCTGGCTAATTAAGTGAAGGTAATTTAAAGTAATGATGTAGATCCTCAAGATAATGCTCTAATGGCTGGCTGAGGCTGTTGATGATACTTAACTGTACTCCTGAGGTGTTGCAA ..:.....:...x:::...x....xx...:....::x...x.x...:.x..:.....................:..x......:.:.......................xx.........:........:..-.:...........:.x...........xx...:...:....:........xx.......:.:......:... 132M1I72M 165/204 80.9% 205/94230402 0.0% 1/204 0.5% 137562511 52652044 +3133 chr4 + 190214555 161476129 161476128 161476203 75 GATAATTCTAGAGATCAGATTCTTCTCCTTCTTCAAGTTTGCTGGTTTTTTTTTTTTTTTGTTTGTTTGTTTTTT chr4 + 94230402 73981033 73981032 73981107 73981033 73981032 73981107 75 GATAATTACAAAGAAAAAATTATTATCCTATGTCAATTCTTGCTCTGCTTTTTTTTGTTTGTTTGTTTGTTTTTT .......x:.:...xx.:...x..x....x:x....x.:.xx:xx.x:........x.................. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 87495096 NA +11374 chr4 + 190214555 161480981 161480980 161481210 230 TTAAAGATTTACTTTTTAAAAAGTAGTAATTATTCATACCTGAACAACTTTTTGGGACTGCACATCAACAATAAGGACTCTGTCCAAAGTTGGCTGTGCAACATAAATGAACTTGTCTTTGACATTAACAGCTGATGCCCACACACACCTCTGAACTTCATCTCCCTCAGCTTTGGGACAGACTTCATCCTGTAATTTAGGAAAGAGAAAATGAAATTTATACCTTAAAT chr4 + 94230402 23908036 23908035 23908257 23908036 23908035 23908257 222 TTAGACATTAACTT---AAAAATTATGAATAA---ATACCTGTACAACTTTCTGAGACTGTACATCAACAATAAGCACTCTGTCAAGTGTAGGCTGAGTCACATAAATGAACTTGTCTTTTACATTAACAGCAGTTGCCCAAACACAGCGCTGAACAGAATCTCCATCAGTTTTGGGACAAACTTCATCCTGCATTTCAAG--AGGaaagaggacttttctgtcttgaat ...:.x...x....---.....x..xx...x.---.......x........:..:.....:..............x........x.:x..x.....x.:x....................x...........x.x......x.....x.x......xxx......x....:.........:...........:.x..:.:.--..::..:.x..xx...x.::...:... 14M3D15M3D166M2D27M 177/222 79.7% 222/94230402 0.0% 8/222 3.6% 137572945 52641610 +3248 chr4 + 190214555 161499073 161499072 161499144 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.xx..x::...........:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 85465867 NA +4907 chr4 + 190214555 161510306 161510305 161510475 170 AAAGAAGGTAATTAATGATAC---AAAATATAATCAACAAATCTAATAATAATCAAGCAAAATTG----------TCACAACA-----------TAAAAATAATTCAACTTAGTACCTTCTTCTCTCCATAATATGTTAGCTACTGCAGCATGTTGAAAGAAAAAGAAGAAAAAGAA-----AAATGAGTAAAGAGAGC chr4 + 94230402 23916933 23916932 23917126 23916933 23916932 23917126 194 AAAGAAGGTAATTACTGTAACTGTAGTCTATGAACAACAA--CAAAAAATATACAAGGAACATTAGAAGATCTTTTCACTGCAATACAGAATAATATGAAAAAATTATATTAGTACCTTGCTCTCTCCACAATATATTTGCAACTGCAGCA---TGaaagagaaagaaagagcagaaaacacaaatgaacaagaaaaac ..............x..xx..---.:xx...:.x......--.x..x....xx....x..x...:----------....x:..-----------..x:..x..x.:.xx..........x:........:.....:..x..x.........---.......:......::.:x....-----......::..::.:.:. 21M3I16M2D23M10I8M11I57M3D23M5I17M 124/165 75.2% 194/94230402 0.0% 34/165 20.6% 137593373 52621182 +3032 chr4 + 190214555 161521720 161521719 161521791 72 GTGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........::.:......x.xx.x...xx:.x.......:....x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 85488514 NA +3087 chr4 + 190214555 161532065 161532064 161532134 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 85498868 NA +17598 chr4 + 190214555 161538159 161538158 161538493 335 TACATACGGGTCTTTCTAGCAGAGTCTTCCACAAAAAGAGAAGAGATGTCTTCATCCACTCCTGCTTCATTCTTTGCGATACAAGTGTATGCTCCAGTATCTTCATAGCGCACATTGCTTATGTGAACCTCACTGCCATTTGCTGAAAAAAGAAGGGAAATGCAACTTGTAAACTACAATTTCAGTTTTGGAACAGTGCTTTCTGATTACACAGTCAAACAGTTCTCTTGGCTTGTCCTAATTAAACTGTTTCCCTTCCTACTTCCATACTTTGAAGGCATGCCAAATTATTCCAGAAGCATTCAAATGTTCATAAACTGTGCTGTCATTCTATA chr4 + 94230402 23929468 23929467 23929788 23929468 23929467 23929788 321 TACTTACGGGTCTTTCGAGCAGAATCTTCTACAAAAAGAGAAGAAATGTCTTCATCCACTCCTGCTTCATTCTTTGCAATACAAGTATATGCTCCTGTATCTTCATAGCGCACATTACTAATGTGTACCTCACTGCCATTTGCTGAAAGGAGAGGAAAAATTCCACATATAGGC-------------ATGCTAAAATGCTTTCAGATTAAACACTCAAAAGGCCTTCTCTATTCATGCTAATTAAACTGTTTTCATTCCTGACTTCATAGCTTGGAGATGTGCCAAACTAATCAAAAGGTATTCAACTGGGTATGCACTATTAT-TCATCTTATA ...x............x......:.....:..............:................................:........:........x....................:..x.....x......................::...:.::....x.x..x.:..::.-------------x..xx.x.:.......x.....x...x.....x:.:::...:x::.::.x...............:.x.....:x:.:....x:...:..:::.......:..x..x.:.:.:......x..xx:..:x...:.xx.-....::.... 174M13D137M1D10M 250/321 77.9% 321/94230402 0.0% 14/321 4.4% 137608691 52605864 +3265 chr4 + 190214555 161539652 161539651 161539751 100 CAGGCAATACGTTTTGAAAAATGAGTGCAAC------TGTATTCTAAATAC------AAACCAACAACAACAACAACAAAAAAGAAAGCAAAAACAAAAACAAAAAAACCCA chr4 + 94230402 41352964 41352963 41353075 41352964 41352963 41353075 112 CAGAAAAGATGCACTGAATTTCGAGAGCAACAAGTTCTTTAAACCAAATATCCCCTTACACCTGCAACAACAACAACAAAAAAGAAAGGAAAACCAACAGCCAACAAAGCCA ...:x..x.:.:x:....xxx:...x.....------.x..xx.:.....:------.x...x:........................x....x...x.:.x..x...x... 31M6I14M6I55M 73/100 73.0% 112/94230402 0.0% 12/100 12.0% 120186688 70027867 +3003 chr4 + 190214555 161541858 161541857 161541949 92 TTAATATATTATATGCAACTGCTTTTAGACTACTTAAATTATTTGACCTTACAAATCTTGCCTGGTTTTGTTTATTTTCCACATATTTGGGA chr4 + 94230402 23702770 23702769 23702861 23702770 23702769 23702861 92 TTAATATTTACTAGACAATTGCTCTTGCCCACCTTGACCTGTTTGAATCTCCAACTCTTTCCTCACAATTTCTATCTCCCACACATTTAGGA .......x.xx..x:...:....:..:xx.xx...:.x:.:.....x::.x...x....x...x::xx.x.:...:.:.....:....:... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 137839088 52375467 +11318 chr4 + 190214555 161542530 161542529 161542706 177 ACCTTGAAGCGTGAGTTGTTTGGAAAGCTTTGGTGTAATATCAATTCCATTCTTCAACCAGCCAAGCTGAGGCTTTGGTATGCCCTCTGCATGGCACCTAAGACTGGCAGTTACCCCAGGCTCTCTAGCCTGACTCTCTGGATACACCCGGATGACTGGAGGAACTAAAGGAAAAAA chr4 + 94230402 23931671 23931670 23931847 23931671 23931670 23931847 177 ACCTTGAAGAGTTAGCTGTTTAGATAACTTTGGGGTGATATCAATACCATTCTTCAGCCAGCCAAGTTGTGGGTTTGGAATACCTTCAGCATGGCACCGAAGGCTAGCTGTCACTCCTGGCTCCCTCGCCTGACTCTCTGGGTACACTCGGATGACTGGTGGAACTGAAGTTAGAAA .........x..x..:.....:..x.:......x..:........x..........:.........:..x..x.....x..:..:..x..........x...:..:..x..:..:..x.....:..x..............:.....:...........x......:...xx.:... 177M 144/177 81.4% 177/94230402 0.0% 0/177 0.0% 137610859 52603696 +3089 chr4 + 190214555 161566077 161566076 161566146 70 TTGTTTTTTTCTTTTTTTTTGGACTATATATATATATATATATATATATATATATATATACACACACACA chr4 + 94230402 41650559 41650558 41650628 41650559 41650558 41650628 70 TTATTTTTCACCTTGTTTTAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTA ..:.....:x.:..x....x.xx:..:..x.xxx..x.:.................:.:........::. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 119915518 70299037 +3263 chr4 + 190214555 161566098 161566097 161566154 57 GACTATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247718 23247717 23247774 23247718 23247717 23247774 57 GACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...:..:.:.:...::.:.:.:..x...:x.:....:........:........... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 138318380 51896175 +3874 chr4 + 190214555 161572190 161572189 161572261 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCTAGGAGTTCAGGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.::.......:..:..:.:x...:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 85538984 NA +3353 chr4 + 190214555 161572311 161572310 161572362 52 CTCCGTCTAAAAAAAA-------AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA chr4 + 94230402 75300433 75300432 75300491 75300433 75300432 75300491 59 CTACTTCTGAGATAAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA ..x.x...:.:.x...-------.................................... 16M7I36M 47/52 90.4% 59/94230402 0.0% 7/52 13.5% 86271878 NA +3026 chr4 + 190214555 161572320 161572319 161572369 50 AAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAAG chr4 + 94230402 43459391 43459390 43459440 43459391 43459390 43459440 50 AAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAAGCAG .............x...x.....x...xx............:...::x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 118112929 72101626 +3091 chr4 + 190214555 161572322 161572321 161572367 46 AAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAA chr4 + 94230402 43459391 43459390 43459436 43459391 43459390 43459436 46 AAAAAAAAAAAAACAAACAAAAACAGATTGAGAGAGAGAGAGAGAA .............x...x.....x...xx..........:...... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 118112931 72101624 +3148 chr4 + 190214555 161572326 161572325 161572380 55 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAAGAAGAAGAATGC chr4 + 94230402 44890393 44890392 44890447 44890393 44890392 44890447 55 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAATGC ..::.............:...........::......x.x.xx:..:.::..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 116681933 73532622 +3071 chr4 + 190214555 161572328 161572327 161572376 49 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAAGAAGAAGA chr4 + 94230402 66158979 66158978 66159027 66158979 66158978 66159027 49 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGA ...::.......:.................::..x...:x....:x... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 95413349 NA +3099 chr4 + 190214555 161573739 161573738 161573817 79 AAAAAAAAAAAAAAAAAAAGAAAAGAAAATGAAAGAAAGACACATAGAAAAGAAGAAAAGAAAGAAAACAAAAGAAAAG chr4 + 94230402 3799349 3799348 3799427 3799349 3799348 3799427 79 AAGACAAAAAGAAAAAAAAAAAAAACAAGTGGGACGCAACCTCACAGAGGGGAAAAAGAGAAAAATAATAACCTAAAAG ..:.x.....:........:....:x..:..::.x:x.:x.x..:...:::...:..:.....:.x..:..xxx..... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 157774390 32440165 +3008 chr4 + 190214555 161574293 161574292 161574353 61 CTATCTTTTTCTTCTACTACAAAACATGACTTTCCTTTTTCTTTTTTTTTTCTTTTTTTTT chr4 + 94230402 67243702 67243701 67243762 67243702 67243701 67243762 61 CTCTCTTTTCCTTGTAATACAAAACAGGATTTACCAGTTTATTTTCCTTATTTTTTTTCTT ..x......:...x..x.........x..:..x..xx...x....::..x.:......:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 94330591 NA +3049 chr4 + 190214555 161579717 161579716 161579763 47 AAAACAAAAACAAACAAAAAAAAAAAAAGAAAGAAAAAGAAAAAAAG chr4 + 94230402 37312385 37312384 37312431 37312385 37312384 37312431 47 AAAACCAAAACAAATGAAAAAATAAGGAGAAAGAGAAGAAAAAAAAG .....x........::......x..::.......:..::........ 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 124267332 65947223 +9913 chr4 + 190214555 161587448 161587447 161587601 154 TTCTTACCATTCACTTGGAAGATGTGAGTCTGATAGACTTGTTCATAGCCATCTGCATAGCAGGTGTAATTGCCAACGTGAGTTGTGGTAACCTTAGTAATATACAAGGACCCATCATCTCCAAAGTCCTATTAAAAATAAAATAAAACAAGGT chr4 + 94230402 23940705 23940704 23940858 23940705 23940704 23940858 154 TCCTTACCATTCACTTCAAGAATATGAGTTTGATAGAGTTTATCATAGCCATCAGCATAACAGGTGTAATTTCCCATATGAGTTGTAGTAACCTTAGTAATGTACAAGGACCCATCATCTCCAAAATCCTACAAGGAAAGATTAAAAACAAGGT .:..............x:.::..:.....:.......x..xx...........x.....:...........x..x.::........:..............:.......................:.....:x.::..x:.xxx.......... 154M 126/154 81.8% 154/94230402 0.0% 0/154 0.0% 137646743 52567812 +3369 chr4 + 190214555 161598245 161598244 161598317 73 TGCACCTGTAATCGCAGCTACTTGGGAGGCTGAGACAGGAGAATAGCTTGAACCCGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:x..........::........x.xx.x...xx:.........:....x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 85565040 NA +3119 chr4 + 190214555 161611142 161611141 161611197 56 CTATATATATGTGTGTGTATATATATATGTGTATATATGTATATATGTGTATATGT chr4 + 94230402 37579518 37579517 37579573 37579518 37579517 37579573 56 CCATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGT .:..................:......x:..:.:.::::....xx....:.x.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 124031624 66182931 +3004 chr4 + 190214555 161611202 161611201 161611266 65 ATATATGTGTATATGTGTGTATGTGTATACATATATATATATATATATATATATATATATATATA chr4 + 94230402 46063299 46063298 46063363 46063299 46063298 46063363 65 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATA ...:.......:......:.:x.:::..::x:..:...:.x......:......:xxx....... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 115547903 74666652 +3033 chr4 + 190214555 161611204 161611203 161611271 68 ATATGTGTATATGTGTGTATGTGTATACATATATATATATATATATATATATATATATATATATGTAA chr4 + 94230402 46063299 46063298 46063366 46063299 46063298 46063366 68 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAA ...::...:..::........x.:.:.::.x:..:...:.x......:......:xxx......::.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 115547905 74666650 +3026 chr4 + 190214555 161641481 161641480 161641522 42 AAATTAGAGGGTTTTTTTGTTTTGTTTTGTTTTTTTTTTTGA chr4 + 94230402 21162760 21162759 21162801 21162760 21162759 21162801 42 AGAGTGGTGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTTGA .:.x.:.x..........................x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 140478721 49735834 +3011 chr4 + 190214555 161641484 161641483 161641520 37 TTAGAGGGTTTTTTTGTTTTGTTTTGTTTTTTTTTTT chr4 + 94230402 22713665 22713664 22713701 22713665 22713664 22713701 37 TTTGAGGGTTTTTTTGTTTTGTTTTGTTTTTGTTTTT ..x............................x..... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 138927819 51286736 +3123 chr4 + 190214555 161652297 161652296 161652377 81 CGGTGGCTCACATCTGTAGTCCTAGCTACTTGGGAGGTTGAGGTGGTAGGATCGCTTGAGCCCAGGAGTTCAAGGCTACAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....:x...:.--.....:.:.........::...:....x:xxxx.:.x.:.....:.....:..:.:x:....::.. 13M2D66M 53/79 67.1% 79/94230402 0.0% 2/79 2.5% 85619098 NA +19588 chr4 + 190214555 161656321 161656320 161656801 481 TACTCACATTGATGTCTTCCAAATCTAAATTATTTAGAATAATATTGTTCCTTTTCCAGATAATGGGAGGTCTCAGGGTTCCTTGAATGGCACAGCTCAGAACAGCACTTTGTCCCACAGTTGCTGCAGTGATGCTTAGTTTCTGATCTTCTGGCAGACTCAACTGGATCACTTCTGT-AAAGATGAAGTGTCAGTAATGTTGATGAGCATTTAGTTTTGTAAGGCTAA-TAGTATAAAATTTCTGAATACTAGTAATT--AAGGCTTTTAATTTGAATAAAAGGGAAAAAAGCTTGTGATGAAATGAAAAAAGAGAAAATTGTTTCCAATAAAAGGTCAGAATGACATTTCAATTTAATTGATTGACAAGCATCCTCATGAGGCACAGAACTATTAAGCATG-AAATGAATATCAGAAGTAGAGTTATAATAAGCCTGGCAGATTGCACCCAAAAGAGAGAT----AAATTACTTAACTGCCAAATCGA chr4 + 94230402 23960196 23960195 23960679 23960196 23960195 23960679 484 TACTTACATTGATATCTTCCAAATCTAAGTTATTCAGAATGACATTGTTTCTCCTCCAGATGATAGGAGGTCTCAGAGCACCCTGGATGGCACAACTTAAGACCGCACTTTGTCCTACTGTTGCTGCAGTGGTGCTTAGTTTCTGATCATCTGGCAAACTCAGCTGAACTATCTCTGCAAAAGATATATTATTTGTAAGGTTAATTTGCTAGCAGTTTCATAAGGTTAATTAGTATGTGGCTTTTGTACACTGATAATTTAAAGAATTTTAATTGGAATCAAAGT---AAAAACTTCCAA-AAACCACAGCAAGTTCAGAGTATTTCAAAT-AAAGGTCACCATGACGTTTCAATTAAATTGACTGACAAGCATGATTCT-ATATAGAGGAGCATTTAATATGAAAATGAATTTCAGAGGTAAGACTACAACAAACATAACAGAACATATCTATAATCAAACTCCGGAAGTTATTTAACAGTTAGGCCAA ....:........:..............:.....:.....:.:......:..::.......:..:...........:.:x..:..:........:..:.::..x...........:..x............:................x.......:.....:...:.::.::....:-......:x.x.:.:x....x...:..xx..xxx:.....::.....:...-......:x:::..:..x.:...::.....--...:x........x....x....x---....:...x::.-:..x::x.:x...xxx.:.x.:....x...-........xx.....:........x......:..........xx.:x.-.x::.x..:.x:...x.::...-........x.....:...::::..:..:..:.x.::....x:::.:.:.x..xx:.:x.----..:...:.....x.::.:::.:. 178M1I50M1I29M2I24M3D12M1D30M1D48M1D22M1I59M4I23M 340/475 71.6% 484/94230402 0.0% 15/475 3.2% 137696125 52518430 +3438 chr4 + 190214555 161665855 161665854 161665921 67 GACAGCAAAAAAATAAAAAAGAAGATGAAGAAGAAGAAGAAGAAAAAGCATTTAAATATGAATGTTA chr4 + 94230402 74285856 74285855 74285922 74285856 74285855 74285922 67 gACTGTAAAAAAATAAAAAAGAAGAGGCAGAGGAGAGAGGAGAAAAAAGATTGAATGGTGAGTGGTA ...x.:...................x.x...:..:::..:.......:x...x..xx:...:..x.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 87379999 NA +3253 chr4 + 190214555 161686300 161686299 161686373 74 TTTGCCATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823261 7823260 7823334 7823261 7823260 7823334 74 TTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ...xx....:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 153863039 36351516 +3428 chr4 + 190214555 161686306 161686305 161686379 74 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 7823265 7823264 7823338 7823265 7823264 7823338 74 ACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAG .:...:.........:.:......x.:.:x.x..x.xx.x...:...x..:..............x:...x:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 153863041 36351514 +3421 chr4 + 190214555 161686311 161686310 161686382 72 TATATATATATATATATATATATATATATATATATAT-----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 + 94230402 7823264 7823263 7823340 7823264 7823263 7823340 77 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ..:...:.........:.:......x.:.:x.x..x.-----..:...x..:..............x:.....::.. 37M5I35M 55/72 76.4% 77/94230402 0.0% 5/72 6.9% 153863047 36351508 +3258 chr4 + 190214555 161686313 161686312 161686392 80 TATATATATATATATATATATATATATATATATATTTT--TTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTATCTCT chr4 + 94230402 7823264 7823263 7823345 7823264 7823263 7823345 82 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCT ..:...:.........:.:......x.:.:x.x..:..--xx..:...x..:..............:xxx..:...:::... 38M2I42M 57/80 71.2% 82/94230402 0.0% 2/80 2.5% 153863049 36351506 +3082 chr4 + 190214555 161686326 161686325 161686414 89 ATATATATATATATATATATATTTTTTTTTTTTTTTTTTT---------TTTTTTTTTTTGAGATGGAGTATCTCTCTGTCG--CCCAGGCTGGAGTGCA chr4 + 94230402 24792626 24792625 24792722 24792626 24792625 24792722 97 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC---CTGGAATGCA ...................x:........x.........:---------..xxx.....x...x..:xx:.....xx.x..:--...---.....:.... 40M9I33M2I3M3D10M 68/86 79.1% 97/94230402 0.0% 14/86 16.3% 136893700 53320855 +3190 chr4 + 190214555 161686334 161686333 161686394 61 ATATATATATATATTTTTTT--------TTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTATCTCTCT chr4 + 94230402 47077444 47077443 47077512 47077444 47077443 47077512 69 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTTGGTAGTGTGTCCCTCT .......:............--------...:.xx................xx.:.:.x..:..:.... 20M8I41M 50/61 82.0% 69/94230402 0.0% 8/61 13.1% 114608890 75605665 +3240 chr4 + 190214555 161691937 161691936 161691991 55 ATATATATGTACACATATATGTATATACACAATATGTATATTCAAAATAAATATA chr4 + 94230402 87719258 87719257 87719312 87719258 87719257 87719312 55 ATCTGTATGTACATAGATATGTATATAAACAATATGTACTTTCAACATTAATCTA ..x.:........:.x...........x..........:x.....x..x...x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 73972679 NA +3240 chr4 + 190214555 161691937 161691936 161691991 55 ATATATATGTACACATATATGTATATACACAATATGTATATTCAAAATAAATATA chr4 + 94230402 87712703 87712702 87712757 87712703 87712702 87712757 55 ATCTGTATGTACATAGATATGTATATAAACAATATGTACTTTCAACATTAATCTA ..x.:........:.x...........x..........:x.....x..x...x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 73979234 NA +3246 chr4 + 190214555 161705910 161705909 161706005 96 TCCAAAAGAAAAATACATATGCATGTGTGTGTGTAGATGTGTGTATATATATATATATATATATATATATATA---------------------------------------TATATATATATATACACACATCT chr4 + 94230402 6244926 6244925 6245060 6244926 6244925 6245060 135 TCCAAAAGTAAAATATAGGTTCTTCAGCAAGTAGGGACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACACCT ........x......:.x:.x.x.xx.::x..:x:..::...:x.:.::............:.x.........---------------------------------------....x...............:.. 73M39I23M 71/96 74.0% 135/94230402 0.0% 39/96 40.6% 155460984 34753571 +3610 chr4 + 190214555 161705933 161705932 161706065 133 TGTGTGTGTGTAGATGTGTGTA--TATATATATATATATATATATATATATATATATATATATATACAC-ACATCTACACACACACAGACTATACCTTTTTACTTCTTAATAATAGGTTTATGGAGGTATCTAGCA chr4 + 94230402 79265520 79265519 79265654 79265520 79265519 79265654 135 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGT-GTACAAATGCATTTCTGTAAGTGCTCAGCA ...........:x........:--.:......:...:.::.:.::.:.:::.x.:....x.:.:.x...-...:..x:.:.:.x.::x...x.:.......:xx.-x..xx...:x:...x..x.:..::::.... 22M2I45M1I35M1D30M 84/132 63.6% 135/94230402 0.0% 4/132 3.0% 82440413 NA +3099 chr4 + 190214555 161724159 161724158 161724254 96 AAAAATTACAAAAATGTTTCTGAATATTTACAAAAACTAAAAGAAAATGCAAATGAAGAGAGGTGATACATAATGCTAACACGTCTTAAATATTAC chr4 + 94230402 82272380 82272379 82272463 82272380 82272379 82272463 84 AAAAATTCCAAATTTACATCTGAATATTTAGAAAAACTAGGAAAAAAAAAAAAAGAAAAGA--------AAAACACTAATA----TTAAAGATTGC .......x....xx.::x............x........::.:....x:x...x...:...--------.x..::....:.----.....x...:. 61M8D12M4D11M 63/84 75.0% 84/94230402 0.0% 12/84 14.3% 79451779 NA +3155 chr4 + 190214555 161726182 161726181 161726247 66 GGAAAAAAATTAGGATGCAACTCTTTTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 34387702 34387701 34387767 34387702 34387701 34387767 66 GGAATAAAAATAGGTTATAATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTTAAAG ....x....x....x.::..:.:x..:.x:.x....x:.:..........:...........x:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 127338480 62876075 +15042 chr4 + 190214555 161759336 161759335 161759710 375 AAGCAAATAGACCATATTGTGTAAAGCAACAGGAAAAAGAACAAAGGGAAATTGGAGAATGAAT---------CTTGTACTCACGGAATGCTCTATAAAATTCTTCAAGAGCCAGGTGCTTGTCAGCATTAAAATCATCATATTTCAATAGAACATACAAAGTACAATCAAAGAGATCCTTGCCAAGTTCTTCCTGTTTTATCACCTAACAAGAAAATTATAAACCATACCTTTAGATTTGTGTCTTAAAATTTCTATAATATAATTTATTATATGTAATAATCACATAATAGTTCATTTCATGTCTGCAGCAGGGCAAAAAACTCAATTTTGGAAAAATCCAGG--TTTTTAGTTACTGAACAATCATTTTTAACCTTTTCAAAG chr4 + 94230402 23986689 23986688 23987073 23986689 23986688 23987073 385 AAATAAAAAAATGCCATTTTAGGAAGACAAAGCAAGAGATAGGAAAGAAAACTGAAAAAAGAATAGGCTAATCTTTGTACTTACGAAAAGCTCTATAGAATTCTTCCAGACCTAGGTGCTTGTCACTATTATAATCATCATATTTCAGCAAATCGAACAGAGAGCAGTCAGACAGATCCTTGCCAAGCTCATCCCGTTTTATTACCTGACAAGAAAATTAT-AACCATGAAATTACATTTGGTCTCTTAGAGTTCTCTAGTATAATTAATTGTTTCTAATAATCATTTAATAGATCATTTTAAGGTTGCTGTGAGGCAAAGCACTGAAACTGTGTGAAGTCGGGGATTTTTCAGTTACTTTGTAATTATTTATTGCAGTTTTAAAG ..::...x.:.:xx:...x.:x:...xx.x..x..:.::x.x:..:.:...:..:.:..x....---------:.......:...:..x........:........x...x.:............x:....x...............::.:.x.:x...:..x:..:...:.x..............:..x...:.......:....:.............-......:xxx...x.....xx:::.x.:.x....x..:.......x...:.x.x.........:x......x......:.x.x:...x.:::......:x...x..x:.xx.x:..:..x:..--....:.......xx::...:....x.x:.xx...:.... 64M9I148M1D123M2I39M 264/374 70.6% 385/94230402 0.0% 12/374 3.2% 137772647 52441908 +10621 chr4 + 190214555 161775870 161775869 161776089 220 AATCATACCTGAGTTAGTTCATTAATATCTACAAGTCCATTACTGTCTGCATCAAAATATTTAAACATTTGATCCACCAATAGCTTCTTCCGAGATATGTCGTCGCCATTAGGATTTTCATTTTC---TTGCATAATATATTTTTGATTTTGTAAATCTAATAGCATATTTTTCATCTTGCTGTATTCAGTAGTCTTGCACTTATCTCCTGTAACAAAAGAAC chr4 + 94230402 23996445 23996444 23996664 23996445 23996444 23996664 220 AATCTTACCTGAGACAATTCATTGGTGTCCACAAGTCCATTGCTGTCAGAATCAAAATAATGAAACATCTGATCTACGAGAAGTTTTCTTAAAGCCATTTTCTCACCAACA---TTTCTATTTTTCGATTGTGCAGCATATCTCTGATTTTGAAGATCCAGTAACATATTTTTCACTTTGCTGTATTCAGTAGGTTTGCATTTATCTCCTGAAAAGAAAACAC ....x........x:.:......::.:..:...........:.....x.x.........x.x......:.....:..x.:x..:..::.:x:..x:..x.:x..:...x:.---...::.....:---...:::.::....:.:........x.:...:.:..:...........::................x:.....:..........x..x:...:x.. 111M3D11M3I95M 160/217 73.7% 220/94230402 0.0% 6/217 2.8% 137779425 52435130 +3562 chr4 + 190214555 161779742 161779741 161779874 133 AAGGATTATTTGTAAAGTTATATATATATATATGTATATATATATATATATATATATATATATATATATGTATATATATATATATATATATATATGTATATAAAATAAACCCTAGGCAATATC-ACTGTTTATA chr4 + 94230402 22303513 22303512 22303636 22303513 22303512 22303636 124 AAGGAATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGC-------TATTTATAAAATTAATTTT---CAATAGCTACTGTAAATA .....x.....x....:....:..::.x....::.xx..x...x......:.x.:..x.:...:..:::::.x.........xx.::-------.:.x........x..:::.---.....x.-.....xx... 87M7D19M3D7M1I10M 85/123 69.1% 124/94230402 0.0% 11/123 8.9% 139476229 50738326 +3104 chr4 + 190214555 161779747 161779746 161779830 84 TTATTTGTAAAGTTATATATATATATATGTATATATATATATATATATATATATATATATATATGTATATATATATATATATAT chr4 + 94230402 91738212 91738211 91738295 91738212 91738211 91738295 84 TTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ..x:....::.:......x...::........xx...x.x.x:.x..:.x.x...:...:.x.x::.....:..:x:....... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 70041535 NA +3102 chr4 + 190214555 161783480 161783479 161783560 81 GTCTTCTTTCTTTCTTTCTTTTTTCTTTCAGTGCATTATGTCTTCTTTCTTTCTTTCAGTGCATTATGTCTGCTTTCTTTC chr4 + 94230402 26761883 26761882 26761962 26761883 26761882 26761962 80 GTCTGCCTTCTTTCTTCATTTTTCCATTCAGTGTACTGCCTGTCCATACTCTTTTCCAGTGCTTTCT-CCTCCTTCCATTC ....x.:.........:x.....:.x.......:.:.::x.x.:.x.x..:.:..:......x..x.-:..x...:.x... 67M1D13M 56/80 70.0% 80/94230402 0.0% 1/80 1.2% 135021597 55192958 +3292 chr4 + 190214555 161783520 161783519 161783659 140 TCTTCTTTCTTTCTTTCAGTGCATTATGTCTGCTTTCTTTCTTTTCTTTTCTTTCTTT--GCTTTCCTTGCT-----TTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTC chr4 + 94230402 25762722 25762721 25762861 25762722 25762721 25762861 140 TCATCTTTGTCACTTTTTGTCTTTCACAATCACTTCCTTCCAATTCATTGCCCTCTATATGATTTCCAAAATACAAATATCTGGTCTTTCTTT-------TATTTATTTTGATCTCTTTCTTCTCTTTCTTCCTCTCACTTTTTTTC ..x.....x.:x....:x..x:x.:.::x:::...:...:.xx...x..x.::...x.--.x.....xx:x.-----.x:..x.:........-------.x.:.x...:xx..........:........:.....x....:.... 58M2I12M5I16M7D47M 89/133 66.9% 140/94230402 0.0% 14/133 10.5% 136020798 54193757 +3416 chr4 + 190214555 161783547 161783546 161783676 130 GTCTGCTTTCT-TTCTTTTCTTTTCTTTCTTTGCT-TTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTT chr4 + 94230402 48874861 48874860 48874991 48874861 48874860 48874991 131 GTCGATTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTT-ATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ...x::.:...-.....:x.x.x...:.:....:x-x..:..::.......x:x.:..:.x...-x.:.:.....x...x.:x...:...:....x:.....:.x....::xx.x...x.x.:......::. 11M1I23M1I28M1D67M 84/129 65.1% 131/94230402 0.0% 3/129 2.3% 112908686 77305869 +3106 chr4 + 190214555 161783569 161783568 161783687 119 TCTTTCTTTGCTTTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTC chr4 + 94230402 21704059 21704058 21704174 21704059 21704058 21704174 116 TCTCTCTTC---TTTTTTGCAGCTAGTTCCTCTTCTTTTTTCTTTCTGATTCTTTCAGACTGTTTTTCCTGTCTGCCTTGCTCTCTCAAATATTCTATTTTTTTCTCTTTCCATTTTTC ...:....:---..::....xx::xx.x...:.::..:.........xx..:.:.:xxx..x.:...:..x...x:..:x....:..xxx:x....x...:.....:.:..:x.:.... 9M3D107M 72/116 62.1% 116/94230402 0.0% 3/116 2.6% 140079510 50135045 +3617 chr4 + 190214555 161783580 161783579 161783705 126 TTTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTT---CTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 48874867 48874866 48874992 48874867 48874866 48874992 126 TCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTAT---TGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT .:..::.x...:x.x.::..:.:...x.xxx.:.:.x....:....---...:.x...x.........x...x.---.x:...:.......x:.......x....::xx.x...x.x...:.:.::... 46M3I25M3D52M 82/123 66.7% 126/94230402 0.0% 6/123 4.9% 112908713 77305842 +3191 chr4 + 190214555 161783608 161783607 161783688 81 TTCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCT chr4 + 94230402 23976501 23976500 23976581 23976501 23976500 23976581 81 TTCTTTTTTATTTGCTCATTTCATCTATGTTTTCTTTTACTCATCCATTTTCTTTCTTTTTCTTTTTTTCCTAATCTTTCT ......:.:x...x..:x:.::x...x.x:.......:x...x:::x:.........:.......:....::xx....... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 137807107 52407448 +3340 chr4 + 190214555 161783609 161783608 161783703 95 TCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTC----------TTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC ...x....:.:..::...::x..:...:..x..x......x.x...::.x..xx:...x..----------:x:........x:.x......x.....:...... 61M10I34M 66/95 69.5% 105/94230402 0.0% 10/95 10.5% 128888011 61326544 +3621 chr4 + 190214555 161783614 161783613 161783722 109 CTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCT--------------TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 72001425 72001424 72001547 72001425 72001424 72001547 123 CTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTGAAATACCCTCCCCATCTGCCTTTCATTTGCTTTTGTGAGATTTTTTTTTTCCTTT ..x::..:.:....x:.:.:.x.:...:.............:...:......:....--------------.x.::..:.:x...x:.....x..:x:.:..x:xxxx...:...:..:.... 57M14I52M 72/109 66.1% 123/94230402 0.0% 14/109 12.8% 89782189 NA +3641 chr4 + 190214555 161783643 161783642 161783763 121 TTCTCTCTCTTTC---TTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTTCTTTCTTTCTT----TCTTTCTTTCTTTCCTT chr4 + 94230402 48874866 48874865 48874991 48874866 48874865 48874991 126 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTT---TATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCT ........::...---.x...:.:.:.x.xxx.....x.:..:....---.x.:..:.x...-.........x.:.x..x...:.....:..x........x.:.::.----.:.x.x.:.......:. 13M3I31M3D12M1I45M4I17M 85/118 72.0% 126/94230402 0.0% 11/118 9.3% 112908777 77305778 +3347 chr4 + 190214555 161783662 161783661 161783761 100 TCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCC chr4 + 94230402 30531212 30531211 30531311 30531212 30531211 30531311 100 TCTATTTCTCTCTTTCTCTTGTAATTTCTCGTCCCATTTTTTTACCATGGATTTTACTGCTGTTATTGTCCCCTCTATCTTTTTTCCTTCCTTTCTTTCC ...x.....:..........x:xx.:.:..x.:.:x.:...:.x:.x.xxx..:.x::x:.x..x..x..:::...x.....:..:...:.......... 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 131252450 58962105 +8865 chr4 + 190214555 161829649 161829648 161829903 255 ACTATGCCAAGAGGGACCCTAACAGCAGG-TGATTACAATAAAAACCACCTTGTTAT---ATAGTTAACATCTGTGCTTTCTAAATGGTAAAGTAAATGAACATAATGGATATAGTTTTGGATTCACATTTTGCCACCTGCCTTTACACAAGCATACACAGAATGTCTTCAAATCACAGAGCCA--AAATCTCAGACAC-ATCCTGCCAATTTTCCTTAAA---------------TGATTGTATGCATCAATGACAAGGAACAAACACATTTTGCA chr4 + 94230402 24012210 24012209 24012482 24012210 24012209 24012482 273 ACTTTGTAGGAGGAGAACCTAACAGAAGGGCTGTTACAATAAGAACCACCTTGTTATTATATAGTTAACATCTGTGCTTCCCAAACAGCAAAGTAAATGAACATAATGGTTATTGCCCTGCATCCACATTTTGCCACCTGCA--TACACGACAATAAATTGA--GTAATCAAACCAGAAAGCCAAGAAATCCCTGTTTCTACCCTTTCCATTTTATTTGAACATCATTACTAAATGTGTTTATATGCAGCTAAACAAAACACCATGAAGATTTTACA ...x..:x::::.:..x........x...-:x:.........:..............---...................:.:...::.:....................x...x.:::..x..:.................x--.....:.xx...x.:x..--..xx.....:..x.:.....--.....:.x.x:x.-.:...x:.x.....x:..:..---------------..x..:......x.x.x:xx..:x.x..x:x.x.....:.. 29M1I27M3I82M2D18M2D20M2I13M1I21M15I41M 185/251 73.7% 273/94230402 0.0% 26/251 10.4% 137817439 52397116 +3683 chr4 + 190214555 161862601 161862600 161862674 74 GCGCACCTGTAGTCCCAGCTACTCGTGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........:.x:........x.xx.x...x.............:.:x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 85829397 NA +3315 chr4 + 190214555 161869063 161869062 161869142 80 ATAGGTGGGCACCTGTAGTACCAGCTACTTGTGAGGCTGAGGCAGGAGAATGGCTTGAACCCAAGAGGCGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..xx.x....x......x...........x:........x.xx.x...xx:..........::..x:xx:..:..:.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 85835865 NA +3047 chr4 + 190214555 161873485 161873484 161873539 55 CTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTCCCACCCTCCCTCCATCCCAC chr4 + 94230402 84992644 84992643 84992698 84992644 84992643 84992698 55 CTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCAC ..:....::..::......:...:.:.:...........:x:.::..:x...... 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 76880841 NA +20609 chr4 + 190214555 161893009 161893008 161893382 374 CCACCAGAGCTAAAATTTCTGTTTTAACACTTAGTCATACAGTAAAAAAGATGGATGCATTTCCTGTGCAGCCATTTACCATCTGGTTAAGCAAATATACTTAAAGATACTTCTGCTTTTGTGATCAAGTGACAACAGATCTAAGAGCAGACAGAGCTTGGACTCTAAAATGATGATTGTACAGCTGTAGTTGGCATCATTAGGGACCAATAAAAA-CTTTATGTTCCATTTGGATGGCAAGGACC-TTTATCAAAGAGAAGCTCAAATGGCTAAATAACAAAGAAATGATCCATTTAGCAGTTGTTTTAAATTTAAGACAGATAATGGAAC---TTCAAAGTCATAATTAGCTTTTAACACTAGAAAGATTGTTTTCA chr4 + 94230402 24044079 24044078 24044456 24044079 24044078 24044456 378 CTACCATAACTAAACTATCTGCTGAGAAACTTGATCATACAGTAAAAGAGATGGATATATTCCCAGTGTGGCCATTCACCGTTTGTTAAAGCAAATACACTTAAAAATTCTTCTACAATTGTGATAAAATGACAGCAAATCTAAGAGCACACAGACCTTATATTCTAAAATGATGATTACACAACTATAGTTTGCATGATTAGGGACCAATAAAAGTCTTTATGTTCCATTTGAATGGTGAGGACCTTTTTTTAAAGAGAAGCTGAAATGGGAAAATAACAAAGAAACGGTCCATTCAGCAGTTGTCTTAAATTTAGGAGCACTAATGAAACAAATTCTTGACCATAATTAGTATTTAAAAA-AGCAAAGGTATTTTCA .:....x.:.....x.x....:.xx:.x....::.............:........::...:..x...::......:...:.:..x.x.........:.......:..x.....:.xx.......x..:.....:..:...........x.....x...:x.:...............::...:..:.....x....x.................:-................:....::......-...x.:...........x......xx..............:.:......:.........:.........:..xx:x.....:...---...xx:::.........:x.....x.x-..x..::x.:...... 216M1I29M1I85M3I27M1D16M 295/373 79.1% 378/94230402 0.0% 6/373 1.6% 137848930 52365625 +3000 chr4 + 190214555 161900631 161900630 161900690 60 TCCATCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAAA chr4 + 94230402 55094094 55094093 55094153 55094094 55094093 55094153 60 TCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATTAAAAAACACAAAGA ...x.::..x..::.x........................x.:.xx...:..x.x...:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 106806537 83408018 +3367 chr4 + 190214555 161901803 161901802 161901877 75 GGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCCGAGGTAGGAGAACTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.x......:.........:.::....:...x:xx.x...x::.........:.:..x:xx:..:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 85868600 NA +3287 chr4 + 190214555 161901912 161901911 161901988 77 GTGACAGAGTGAGTCTCCATCTCCATAAAATAAATAAATAATACAAAAAGAATGGGTTTATAAAAATTAAAGCCAAA chr4 + 94230402 64058556 64058555 64058632 64058556 64058555 64058632 77 GTGAAAATGTGTTCTTGCTTCTCTCTGTAAAAAATAAAAAATAAAAAGCGTATGAGCTTATAAAGATTAAAGCCAAA ....x.:x...xx::.x.x....:x.:x..x.......x....x...:x.x...:.:.......:............ 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 97843356 92371199 +17245 chr4 + 190214555 161920394 161920393 161920714 321 CTTCATTTACCTTTAAAGAAGCAGTCTTCATTGTGAACAATGGTAATCTTTTGTTTTTTCAGGCAAGCAGCTCTGTGCACTTCACAGTGGTTTTCATAGAATTCTCCGTCAGATCCACACACAGGTTTGTAGTGACGTTTGCAAAGGTCCATACAGGCACATTCTGCTTGCCCTGTCTCTCTGCTGGTAACACAGTGTCTTCCCAAACCACAGTACTTATTTTCACAAGATCCAAAAGGGCCATCCTGAATCATAAATCCTGAAGAATTAAAAAAAAA--------------TTGAAAATCGTTTGGTTCATTTGTCCAAATAATATATATATTT chr4 + 94230402 24055316 24055315 24055650 24055316 24055315 24055650 335 CTTCACTTACCTTTGAAGAAGCAATCTTCATTGTGGACAATGGCGACCTTCTGCTTCTTCAGGCAGGCAGCCCTGTGTACCTCACAGTGGTTTTCATAGAACTCTCCATCTGAGCCACACACAGGTTTGTAGTGTGGCTTGCAACGCTCCATGCAAACGCATTCAGCCTGCCCACTCTCCCCATTCATGACACAGTGCCTACCCAGGCCACAGTACTTGTTTTCACATGATTTAAAATGTCCATCTTGGTCCATGTACCCTGTAAAAATAAATAAATAAATGTGGAGTACTGTCACAGAACATGCAAAGCATTTGACAAAATAAAACACATGTTT .....:........:........:...........:.......::.:...:..:..:........:.....:.....:..:....................:.....:..x..x....................xx.:......x.x.....:..::.:.....x..:.....xx....:.:::.x:.:........:..x....::...........:........x...::....x.x.....:..:x:...:x.:....x.:..x....x...x.--------------.::x.:.x.:.x:::xx......x.x......x.:.:..:... 278M14I43M 243/321 75.7% 335/94230402 0.0% 14/321 4.4% 137865078 52349477 +3395 chr4 + 190214555 161936054 161936053 161936109 56 CATGTAATCCCAGCTACTCAAAAGGCTGAGGCATGAGATTCGCTTGAACCCAGGAG chr4 + 94230402 76033209 76033208 76033264 76033209 76033208 76033264 56 CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....:.:.........::..........x.x..x..xx.:...........:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 85902845 NA +3875 chr4 + 190214555 161945612 161945611 161945712 101 CGTAGTGGCATGCACTTGTAGTCCCAGCTACTGGGAAGGTTGAGACAGGAGAATTGCTTGAACCTGGAAGGTGGAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.....--.....x......:.........x.:....:....x.xx.x...x::........::....x.xx:..:..:..------..x...:..... 8M2D73M6D12M 69/93 74.2% 93/94230402 0.0% 8/93 8.6% 85912415 NA +3561 chr4 + 190214555 161948152 161948151 161948225 74 GTGCACTTATAGTCCCAGCTACTTGACAAACTGAAGCTAGAGGATTGCTTGAGCCTGGGAGTTTGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:............x.::....:x.:x.x.:.x::.....:..::.:..:..x:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 85914948 NA +3150 chr4 + 190214555 161977619 161977618 161977679 61 AAAAAAAAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATAA--TAAATTATTTTTTT chr4 + 94230402 74710685 74710684 74710747 74710685 74710684 74710747 63 AACAAAAGAAAAATAAAGAGAAATAATAATAATACTACTAATAATAAAGTAACTTCCTTTATT ..x....:.....x...:.:..............x..x.........--...x..x:...x.. 47M2I14M 50/61 82.0% 63/94230402 0.0% 2/61 3.3% 87266934 NA +3102 chr4 + 190214555 161978316 161978315 161978371 56 CTTCAATTGGAAAAACAAAACAAAAGAAAACAAAACAAAAAACCCTTTTACTGGGC chr4 + 94230402 67763412 67763411 67763467 67763412 67763411 67763467 56 CTTTGTTTGGAGAAAAAAAATAAAAAGAAACAAAACCCCAAACTATTTTACTGGGC ...::x.....:...x....:....::.........xxx....:x........... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 94214904 NA +3396 chr4 + 190214555 161980024 161980023 161980108 85 AAAAATAAAAATACAAAATGAAGGAAAGAAAGAGAAAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAG chr4 + 94230402 29252965 29252964 29253049 29252965 29252964 29253049 85 AGACATAAAGATACTAAAGGAAGAGAACTCAGTTAAAAAGAAAAAGTGATAGAAAAAAAAAAAACAATTGAAAGGGAAGAAAAAG .:.x.....:....x...x....::..xxx..xx.......:....x..x.:.:...:...:..x..xx:...:.:....::... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 132727059 57487496 +3790 chr4 + 190214555 161980039 161980038 161980225 187 AAATGAAGGAAAGAAAGAGA----AAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAGAAAAAGAAAGAGAGGAGG---------AGACAAGGAAGGAGA-------GAGAGAAAAAGGAAAGGAAAGAAGA chr4 + 94230402 1317373 1317372 1317566 1317373 1317372 1317566 194 AAGCTAAGGATGGAGAAAGACTTTAAAATAGCA---GAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGG---------AGGGAAGAGAGAGCACAAGTGGGAAGAAATCTGGATTTAGA-AAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGA ..::x.....x:..:.:...----....x..x.---..:x....xx::.:...:..:.....:.......:..:...:x..xx....x..:...x:::..x...xx.:..:..---------.:.:....:...:x.x:.:x.:..:..::---------...-........:x.-------..:x.:.......:..xx...:... 20M4I9M3D77M9D29M9I3M1D11M7I25M 116/174 66.7% 194/94230402 0.0% 33/174 19.0% 160662666 29551889 +3504 chr4 + 190214555 161980039 161980038 161980167 129 AAATGAAGGAAAGAAAGAGAAAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGA----AAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGA-AGGAT----AAAGATAAAGAAAGAAAG chr4 + 94230402 51148366 51148365 51148503 51148366 51148365 51148503 138 AAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .....:x.xxx.x.:.:....:...xx.x.......:...:.........x.::.----.:..xx:.:.x.:.:x.x....:.x:.::.....:....:..:..:.::..-..x..----..:x..:...:...::.. 55M4I51M1I5M4I18M 84/129 65.1% 138/94230402 0.0% 9/129 7.0% 110831673 79382882 +8360 chr4 + 190214555 161980043 161980042 161980334 292 GAAGGAAAGAAAGAGAAAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAGAAAAAGAAAGAGAGGAGGAGACAAGGAAGGAGAGAGAGAAAAAGGAAAGG--AAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAAAGAAGATAATTTATGGAACTGCATAAAT chr4 + 94230402 4411528 4411527 4411806 4411528 4411527 4411806 279 GAGGGAGGCGGAGGGGAGAGGGGAACGGGAGGTGgggaagggaagggagggaaaggacgcgatgaggaggaaggggaggggaagggGGAAGAGGAAAGAAAATCGAGATAGGAAAGGAAACTGGGAAACTGGGACAGGACAGGAga-aaggaaagggaaaaggggaaaggaaaggggaaaggagaaaggaaagaaaaCTGGGAAAGGCACCAAGAAAGATAACAGAAAAAAATGAAGGAGAAAGGATAGAGAAAGAAAGGAA-----------AATCCA---AACTGCATAAAT ..:...::x::..:.:.:.:.:...x.:...:x:.::.:::::.:::.:.:...:..x:x::x:....:.:..:.:.::....::.::.::.:..:.:..:.xx..x.x..:x..:....xx::....xx.::.x..::x......-......:.:..:.::.::..........--....:.........::..:.xx:::::.:.x.xx........x..x.....:...x:...:.::..:..x............:..-----------...::.---............ 146M1D28M2I85M11D6M3D12M 171/277 61.7% 279/94230402 0.0% 17/277 6.1% 157568515 32646040 +7626 chr4 + 190214555 161980051 161980050 161980305 255 GAAAGAGAAAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGA-AAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAGAAAAA---GAAAGAGAGGAGGAGACAAGGAAGGAGAGAGAGAAAAAGG-AAAGGAAAGAAGAAAGGAAGAAAGAAGAAAG---GAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGA chr4 + 94230402 4411528 4411527 4411787 4411528 4411527 4411787 260 GAGGGAGGCGGAGGGGAGAGGGGAACGGGAGGTGgggaagggaa---gggagggaaaggacgcgatgaggaggaaggggaggggaagggGGAAGAGGAAAGAAAATCGAGATAGGAAAGGAAACTGGGAAACTGGGACAGGACAGGAgaaaggaaagggaaaaggggaaaggaaaggggaaaggagaaaggaaagaaaaCTGGGAAAGGCACCAAGAAAGATAACAGAAAAAAATGAAGGAGAAAGGATAGAGAAAGAAAGGA ..::...:x::..:.:.:::.:...x.::..:x:.::..::...---.::..:.:.....x.x::x..::.....::.:.:.:-...:.::....:.:.x:..:..x:...x..:..:::...---.:..:xx:...x::....:.::.:::..:..:.....:..-.........::.......::..:...::..:---.:::....x.xx......:.x:.x.....:...x:...:.::..:..x.:............ 44M3D36M1I39M3I40M1I31M3I62M 155/252 61.5% 260/94230402 0.0% 11/252 4.4% 157568523 32646032 +3152 chr4 + 190214555 161980064 161980063 161980135 72 AGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAA chr4 + 94230402 38078782 38078781 38078853 38078782 38078781 38078853 72 AGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAA .....:..:............:.::::.:.:..x.x...:.:.xx.xx:x........x.:...:...:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 123901282 66313273 +4137 chr4 + 190214555 161980087 161980086 161980311 225 AAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAGAAAAAGAAAGAG--------AGGAGGAGACAAGGAAGGAGAGAGAGAAAAAGGAAAGGAAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAAAGAAG chr4 + 94230402 8397332 8397331 8397555 8397332 8397331 8397555 224 AACGAGAATAAGAGAAAAGCAGCAAC-ACAGCAAGCGTAAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCA--------GAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGACAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAG ..x:....x....:.:.:.x..x..x-.x..x..:x.x..:.:..::....x.......::..:..x.xx.:....xx..xxx:x.....x.x--------.....:..xxx.xxxxxx...x....xx.--------...:....x:..::....:..x:..:x.:.......x...x..:.x....:x:.:..:..:...x....x.x:.:.:.x:x:.::x:........ 26M1D66M8I29M8D95M 133/216 61.6% 224/94230402 0.0% 17/216 7.9% 153582755 36631800 +3397 chr4 + 190214555 161980154 161980153 161980212 59 ATAAAGAAAGAAAGAAAAAGAAAGAGAGGAGGAGACAAGGAAGG-AGAGAGAGAAAAAGG chr4 + 94230402 26216012 26216011 26216071 26216012 26216011 26216071 60 ATAGTGAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGG ...:x...................x.:.....:..x..:.....-:.:...:.:.:.... 44M1I15M 47/59 79.7% 60/94230402 0.0% 1/59 1.7% 135764142 54450413 +3055 chr4 + 190214555 161980197 161980196 161980289 93 GAGAGAGAGAAAAAGGAAAGGAAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 25222917 25222916 25223009 25222917 25222916 25223009 93 GAGAGTCATAATGAGAACAGGAAAAGAGAAAAGAAGAAACACACCAAAAAGACTTAGGAAAGGATGAAAAAAAGAAGATTGAAAAGAATGGAG .....xx.x..x:..:.x......::.....:.......x.x:xx.::....xxx.:.....:.x:..:...::....xx....::..x::.. 93M 59/93 63.4% 93/94230402 0.0% 0/93 0.0% 136757280 53457275 +3104 chr4 + 190214555 161980247 161980246 161980407 161 GAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAA----------AGAAGATAATTTATGGAACTGCATAAATTATCAAGAGACGGAAGGATTTGAAAAGTAAAATTGAGAAAGAAGTAGCAGCTGCTTAAGACCAAAGAACAAAT chr4 + 94230402 29014678 29014677 29014832 29014678 29014677 29014832 155 GAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAACCCTTTGATTAAGAGTTAACTTTTAG--------------CTAAAATGCTGAAAATTCAAAAGAATGTGATGCAGAAGGAAGTCATAGATGGCTTTGA--AGAGAACAGGT ......:xx.x:..::....::.:.::::.....:...:.............:..x....----------.::..x...:..x.:.--------------::..:.x:.x...::x.:x:..:.:.:x:..xx....:.....x::..x..x:.xx..--.:......::. 60M10I16M14D58M2D11M 90/145 62.1% 155/94230402 0.0% 26/145 17.9% 132965569 57248986 +27589 chr4 + 190214555 161988666 161988665 161989341 676 TTTTATGAGCAAAGAAGTTATTTCTCACAT---ACTTTAATTTTTCCCTTTTCTGGTGATTTATTTTAAATTAAGAAATATAAGATGCTAAGTCAGTCTAATTTAAAGTTACAGTACAACTAATTCTAATAATGAAATAACCCCTTACAGCAA-GTCTTTGAATCATTAGAGGATTTTCAGATAATTTCTTGTGAATGCAAACAAGATAATCATAGAAGTGCATATATCAAGTAGCCCTTTCTTCAAACACTAGTGGTCATGCATATTCAACAGAATGCAAATATTGACTTTCCTGATAGCAAGTGGGGCAGATTGACAAAGTGTCTGATGGGAAACTGTAATCATTTTGTGGAATGTGACAGTGACCTTCATGTCCCCTATGCCAAGGATGTATTCTACTTAAATCTTTGATTCTGCTAACCTTTAAACAGTTTCCACAACTTGAGAAATAAAATAGACATCTGGAAAAGGGCAGTCTCTGCCAGAACAATAAAAGCTTGGAAGAAATAAACAGGCCTTGTGTCTCATAATGTTTCTCAGGAGATCCAAGGCAAGAAAGCCTCAG--GTTGCAATTGACTTCTCAAAAAGACAAACTAGCACATGAAAA-ACTTCCTCCCTCTGAGTAAGCT--GAGGGGAGAATAGGAAAGGTCAGCCCATTGTATTCCCAGTAATCAATATG chr4 + 94230402 24085425 24085424 24086096 24085425 24085424 24086096 672 TTCTATGAGTAAA--AGTTTTTTTCCATATTTTCCTTCAAGTTGTCC---TTCTAGTGCCCTAGCTGAAATTAAAGAACATCAAATTCTAAGCCTGTTGAACTTAGAATAGCAA-AGAATTAATCCTTATAATTAAATAACTCTGTACAGTGTTGTCTTTGAATCATTAGAGGATTTGCAGATAGTATCTTGTGAATGCAAACAAGATAATCATACAAGCAAAGATACCAAATAGCCGTTTTTCCAAACACTAGTGGGCATGTATATTCAACAAAATGCAAATATTGACTTTTCTGATAGCAACCAGATCAGATTGCTAAAGTGTCTAATGAGACACTGTAATCCCAGCGTGAGAAACAGTACTGACCTTCATGCTCTGTATGGCTAGCGTGCAGCTTGCTTGCATTTATGATTCCCCTAACCTCTAAGCATTTGACACAATTGGAAGAATAAAGTAGACGCGTGGAAAAGGGCATTCTCAGACAGTACAA-AAAAACTTGAAAGAAAGTAAAAGGCCTCGAGTCTCATAATATCTTTCTAGAGACGCAAGGATAGGAAGAAATGGCATTTGAAACTGACTGCTT------ATAAGTGAACACATAAAAAGACTCATTTTTTCTTAATGAGTCAGGAAAGGGGATTGTAACAGGTCACACACCTGAATGTTTGGCAGTCAGTATG ..:......:...--....x...::..:..---x...:..x..x...---....:...x::..x:.x.......::..:..x.:..x.....:.x..:x..:...:.:.x:..:-.x..:....:..x.....x.......:.:x.....::x-.......................x......:.x............................x...::x.x...:...:.....x...:.:.............x....:..........:..................:..........x::.:x.......x:.........:...:..x.........x:xx:...::.x:::::.x...........::.:x....x.x..x:..:.x::.:...:x..:.x......:x.......:...:..x..xx.....:.x..::......:.....::x............x....x.x...x....-....:....:......xx..x......:.x..........:.:.:..x:....:x.....xx..:...xxx::.--x...x..:.....x..:------.:..::x.:.....:....-...:x:.:::...x.:.:..::--..::..:..x.:x:.x......xx.xx:..x..x::::.:.:...:.... 13M2D15M3I14M3D64M1D38M1I337M1D74M2I17M6D19M1I22M2I50M 476/663 71.8% 672/94230402 0.0% 22/663 3.3% 137903241 52311314 +3004 chr4 + 190214555 161992848 161992847 161992894 47 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495009 1495008 1495055 1495009 1495008 1495055 47 AAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ......x.:...............:.:..:...:.....x....::. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 160497839 29716716 +3125 chr4 + 190214555 161992912 161992911 161992978 67 ATATATATATATATGTGTGTATATATATATGTGTGTATATCTATATATATATGTGTGTATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.:..:......:.:x::.:..:.x::.....:........:....:..xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 115929613 74284942 +3348 chr4 + 190214555 161992941 161992940 161993003 63 TGTGTGTATATCTATATATATATGTGTGTATATATATATATGCAAG-TAGTGACATGTTTCAAT chr4 + 94230402 48958675 48958674 48958737 48958675 48958674 48958737 63 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTGAT-TTTTCCAAT .......x.:.x..:.....................x.....x...-......:-.x..:.... 46M1I7M1D9M 53/62 85.5% 63/94230402 0.0% 2/62 3.2% 113034266 77180289 +3135 chr4 + 190214555 162000469 162000468 162000540 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCCTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x::.:......x:.:..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 85967263 NA +3105 chr4 + 190214555 162000580 162000579 162000625 46 AGAGCGAGACTCAGTCTAAAAAAAAAAAAAACAAAAACAACAACAA chr4 + 94230402 28489355 28489354 28489400 28489355 28489354 28489400 46 AAAGCAAGACTTGGTTTGAAAAAAAAAAAAACAAACACAAGAACAA .:...:.....::..:.:.................x....x..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 133511225 56703330 +21774 chr4 + 190214555 162008952 162008951 162009650 699 AAATTAAGTTGAAAATTAAAAATAAATAAAATGGAAGAAGAAATTTAAAAATTAATCTTTGATTGACATAAGTTCCTAACGTCCTACAAAAAGTGTCCAAAAATTACATATGTTTAAACTACCAGTTAGTAATAGTTGTGTTCTCTTTTAGCAAAGCCTTCTTAGAAATGCCATTTTTTCAACAATAATCAGAACCGAAAGCCTTGTCCACCTTTTAGGATAAAGTGGCATGCAGCCTTGTTAATCTGACCCATTGAAATAAATGGAAAATGTACTAGTGCCCCAGTATAATTGTTAGCAGCA-GCATTTTAGAAGGCACTAATTTGCACTTCATTGTAATATCTCTTCTCAACTTTGATATAAATGTTAACTAGAGCTGGCATTATTAATAGCAAGCTAGGATCTGGGGCAGGGGCAAAGGAGTGGTCTTACAGAGAATCAGAACATGACCTTAATTGTTAATGAAACATGGCAGTTCCA----TGAAAAGGCAAAAGCACAAAA--TGAATACAATAATTGTTTCAGTAGGAACCTGCATAATGCAAAAGGCTACAATTATAAAATATGCC--------------ACCCCAAAAAGCACTCCTTGGATTCATATTTCAAGGTTATATGACCTCTGATTGCCCTTTAAATTACCAG-----------TGGACAATATAAGAGAAAATAATACATCTTAATATATAATTAATAACACTTAAAGGTATTAAC chr4 + 94230402 24095134 24095133 24095844 24095134 24095133 24095844 711 AACTTATGTTTATATTTGTAAATTGAAAAACAGAAAGACATTTTATCAACAGCAATCTCCAGTTGGGATC-----------TTCTCAGAAGAGGGTCTATTAACCACAT----TTAAACCCCTAGTTAA-AATAGATGCATTAATTCCTTGCAAATTCTCCTTAGAAGCATTATACTTCTAAGCATAATCAAAAGAGGCAGCTGGGTCCACCCTTTATGATAATGTGCCATGCAGCTTTATTAATCTGACCTTTGGAAATAAATGAGAAATTTAATACTGCCCCCCCATAATTGTTAGTGGCAGGCATTTTAGCAGTCTCTAATTTGCACTTCACTTTAATATCTGCTTTCAGTTATGATGTAAATGTTAACAGGATCTGACACTCCTAATCGTGTTCCTGTGTCTGAAGCAGTGGCAAAAGAGTGTGTTTGGAGTAAACTGGGATGTGACCTTAACGGATAATGAAATGCATCAACCCTAGCTCTGCAAAGAGTAAAACAAAAAAAGTGAATGCTGTAATTGTTTCAATTGGCATCTGAGTAATATACAGTGCTGCAATTACTGGGTAGGCCTAAGGATACGGGGGAGTACAAATCATATTCACCAGACTCATATTTCAAGGTTACATGAGTTCTGACTATCCTTTCAGCTGACTGCAAGATGTATATGTATATGATACAAGAAAATATTATAC----AAATACAGTCAATAGCATTCCAAGGAATTCAC ..x...x...x.x.x..:x....x:.x...xx.:....x:xxx.x.x..x.x:.....::::...:x..x-----------.:..xx:..:..x...:.xx..::....----......:x.:.....:-.....x..::..xx:.::.x.....x:..:.......:::::..x:..::..xx.......:..xx.:x...:xx.......:....x.....x...x........:..:...........:x.x..........::....x..x..x......xx:...........::...-.........x..x.x...............:.x........x:.:...::.x....:...........x:..x...:..:.x:....x.::xx.:x.x:....::....x......:.....xx:..:x..x:..:::.:.::.........:x.x........::::x..:::.:.----..x....:xx...:..x....--.....:.x:...........:.x..x.:...x:....::.x.:x...:......:x:::..x...--------------.x:x....xx::.:..x:::..:................:....x:.....:.::.....x.::.:x.x.-----------..x.:.xx...x:........x..:.:----.x...:.:.:....:..:.:x....x...x.. 70M11D28M4D16M1D173M1I177M4I21M2I65M14I70M11I27M4D32M 456/679 67.2% 711/94230402 0.0% 52/679 7.7% 137913818 52300737 +3317 chr4 + 190214555 162020771 162020770 162020851 81 AATTAAAAGAAAAAACAGAAAACAACAAAAACAAGCAAAGATAAAA---------GTATTTCAAATATTTATGATTTTTCAGCAAATATC chr4 + 94230402 26426463 26426462 26426549 26426463 26426462 26426549 87 AATTAAAAAAAAAATCAGAAAGCAACAGAAACAAACAAACAAAAAAAATGGGAGCACATTTAAGATACATTTG---TTTTAGAAAACATC ........:.....x......:.....:......:....x.x....---------::....x.:...:x.x..---...:..x...:... 46M9I18M3D14M 61/78 78.2% 87/94230402 0.0% 12/78 15.4% 135594308 54620247 +3139 chr4 + 190214555 162026303 162026302 162026354 52 TCTTTTTTTTTTTTTTTCTTTTTGAGACGGAGTTTTCCTCTTGTCCCCCAAG chr4 + 94230402 64964475 64964474 64964526 64964475 64964474 64964526 52 TCTTTTTTTTTTTTTTTCCTATTGAGACAGAAATTCCTTTTTTTCCCCTTAG ..................:.x.......:..:x..:.:.:..x.....:x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 97061828 93152727 +4561 chr4 + 190214555 162033511 162033510 162033677 167 TTTAATTATCATTATTTTCTCATTTTTGACTTTTTATTCAAAGTAGCATCACATATCTTTTTTCTTTCTGTTATGAACTTATATAATTGTTA---TCTTAAAGCAATCATTTCTTACCTTTGACTCTTGAACTTTCTTGATTTTTTTCCTGCTGGAAATAAAACAGAAAA chr4 + 94230402 24103323 24103322 24103479 24103323 24103322 24103479 157 TTTAGCAATCAT-ATATATACATTTT---CTTATTACTAAAAATG--AATGTTTATTTTTTTTTTTATAGTTACAAG-------AATCACCAGATTTTGAAAACAATCGGCACTTACCTTTACTTCTTGAACTCTCCTGATTCTTTTCCTGCTGCAATTAAAAGAAAAAA ....::x.....-..x.x:x......---...x...:.x...:.:--.x:::x...:......:..x:x....::.:-------...::::.---.:.x...:.....:x:x.........:x:.........:..:.....:...........x..x.....x.:.... 12M1D13M3D16M2D30M7D8M3I75M 108/154 70.1% 157/94230402 0.0% 16/154 10.4% 137930188 52284367 +3068 chr4 + 190214555 162041188 162041187 162041236 49 GAAAGATGAGATGGTAAAAAAAAAAAAAAAAAAAAAAAGGAGTTTATCT chr4 + 94230402 52702908 52702907 52702956 52702908 52702907 52702956 49 GGAAAATAAAATGCCAAAGGAAAAAAAAAAAAGAAAAAGGAGCTTATTT .:..:..:.:...x:...::............:.........:....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 109338280 80876275 +3316 chr4 + 190214555 162057808 162057807 162057886 79 GTGGCACATGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAACCACTTGAATCTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:.......:...::........x.xx.x...x........:.::.:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 86024607 NA +3341 chr4 + 190214555 162081770 162081769 162081831 62 CAGAAAGAAAATTAG---AAAACTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACAC chr4 + 94230402 75248021 75248020 75248085 75248021 75248020 75248085 65 CAGGCACAAAATTATCACAAAATAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACAC ...:x.x.......x---....:x:x.:..::...................x............. 15M3I47M 50/62 80.6% 65/94230402 0.0% 3/62 4.8% 86833749 NA +3017 chr4 + 190214555 162081792 162081791 162081831 40 CTTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACAC chr4 + 94230402 75248048 75248047 75248087 75248048 75248047 75248087 40 CCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC .:.::...................x.x............. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 86833744 NA +3094 chr4 + 190214555 162081797 162081796 162081831 35 CTCTCTCTCTCTCTCTCTCTCTCACACACACACAC chr4 + 94230402 75248049 75248048 75248083 75248049 75248048 75248083 35 CTTCCTCTCTCTCTCTCTCTCTCACACACACACAC ..::............................... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 86833748 NA +3314 chr4 + 190214555 162089501 162089500 162089575 75 GGTGCACCTGTAATCCCAGCTACTCGGGAGGGTAAGGCAGGAGAATCACCTGAACCCTGGAGGCGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x....:.:.........:.::...x.:..x.xx.x...x...:.......x.:..x:xx:..:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 86056298 NA +7300 chr4 + 190214555 162111267 162111266 162111426 160 GTACCTTATGTCGCAATCTCATTAGAGGCTGATAGGATTTAAGGCCATATCCTCCTTCTTTGGTTGGCCTTCCTTCCGACTCCAGAAAAATGAATCCGAGAACCAAGACAACTGACCAGCACTTAAACATCCTTATTGCTTTTCACCTGTCAAAATTAAA chr4 + 94230402 24128815 24128814 24128971 24128815 24128814 24128971 157 GTACCTTGTGGCGTAATCTTATGAGTGGCTGATAGGGCATAAAGTCATATCCT---TCCTTGGCTGGCCACCCATCTGCTCCGAACAAAATCCATCCAAGAAGTAAAACTGCTGACCACCACATAAACATCTTTACAGGTCTGTTCCTGTCAAAATAAAA .......:..x..:.....:..x..x..........::x...:.:........---..:....:.....x:..x..:.x::.x.:x.....xx....:....x:..:..x:.......x...x........:...:x.x.:.x:x...........x... 53M3D104M 115/157 73.2% 157/94230402 0.0% 3/157 1.9% 137982452 52232103 +3018 chr4 + 190214555 162141088 162141087 162141130 43 CACCTCCCTCCCTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 87791850 87791849 87791892 87791850 87791849 87791892 43 CATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTT ..:........:.:...::...........::.....:..... 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 74349238 NA +3003 chr4 + 190214555 162141097 162141096 162141153 57 CCCTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTG chr4 + 94230402 90152629 90152628 90152685 90152629 90152628 90152685 57 CCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG ..x....::.....:.::...::.x.............x...x.:.:....:..x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 71988468 NA +3320 chr4 + 190214555 162146640 162146639 162146762 123 TTTCTGTGTTTTTTACCTAATGTCCCTTC---CCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCCTTCCCCTTCCTTCCCTCCTTTCTTTCTTTCTCCTTTCTCTCTCTC chr4 + 94230402 53764506 53764505 53764627 53764506 53764505 53764627 122 TTTTTGTATTGTTT---TAGTTTAGTTTCAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCT-CCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTC ...:...:..x...---..:.x.xx:...---.:..x.:..::.::.:..:.::.:.:...:..:.....-..x.x:..x:........x....:..x.:..:.:..x....:x.:x::.::.... 14M3D12M3I38M1D55M 76/119 63.9% 122/94230402 0.0% 7/119 5.9% 108382134 81832421 +3143 chr4 + 190214555 162146714 162146713 162146807 94 CCCCTTCCCCTTCCTTCCCTCCTTTCTTTCTTTCTCCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTGTTTTCTTTTTGTGTGTGTGTGAG chr4 + 94230402 35385249 35385248 35385341 35385249 35385248 35385341 93 CCCCCTCCCCTCCCCCCCCCCCTTTTTTTTTTTTTTTTTCCATTTCAGCTCTCTTTTTTTTAATGCTTAAATGCTTTTTTGGTGAGT-TGTAAG ....:......:..::...:.....:...:...:.::..:.x:.::xx......:.:.:..xx.x::.xx:.x:.:....x...x..-...:.. 87M1D6M 59/93 63.4% 93/94230402 0.0% 1/93 1.1% 126761465 63453090 +9204 chr4 + 190214555 162162717 162162716 162162993 277 CAAAAGAAAATTCTTCTAAGTAAAGAAAAGCTCTCTGTTAAGCATGCAAGAGGTTAAACATTGCTGAAATAGTGAGACATTT--------------TCTCA---GCCCACACTTCCCAGTTCCATTCAATTACCAACAGCACAAGCGACTATAATACAAGCGAATACTGTATTATTAAATCAGAACTTCCCATTTACATCCACCTCTAACCTGAGGGGGTTGCAAGGGGATGACATTTGCTAGTCAACAGCAGAACAAACAGCCCCCAACT----TGGAAATACACA-TGACCTTGGGG chr4 + 94230402 24152446 24152445 24152734 24152446 24152445 24152734 289 CAGTAGAAAAACCTTCT--GTGAAACACAGCACCCTACCAAGCTTATAAAAGGTTAAACACTTCTGGAATAGCAAGACATTTCACATAGCAAGGCATTTCATCTACCCACACTTTTGAGTTCCATTCAGCTACTAACAGCAGCAGTG-CTGTAGTACAATATACTTCTGCGTTATTAAATCTGAGTTATGCATTTACACCTAGCTACAGTCTGGAGG-------AAGGCCTGACGTTTGTCAGTCAATACCAGAGGAAAGAACTCACAACTTCCATGGGCTCAGACACTGACCTTGGAG ..:x......x:.....--..:..:x.x...x.:..:::....x.::..:..........:.x...:.....::........--------------.:...---:.........::x...........::...:.......xx..:.-..:..:.....xxx.x.x...::..........x..::.x:x........:.:.x..x:.::...::..-------.:..xx....:....::......:.x....:x...x.:.:.x.....----...:xx:.x...-.........:. 17M2D63M14I5M3I43M1D69M7D47M4I12M1I11M 190/267 71.2% 289/94230402 0.0% 32/267 12.0% 138010271 52204284 +3660 chr4 + 190214555 162169025 162169024 162169203 179 TTTAAAGTTCGGTAATATTAAGATTCTTTGGAATCTAAAA-CTATGATGCTATTTCTTA-------ATTGAACTTTAAAAAAAAAAAGCATGAGACTTGCTGATGCTCAGACAGACAACTTACGTTCTTAGAGTGCTTGTGTTTAAGAGAGCTCTTAGGGCATCTATTGGCCTATGTTGGTATTGCA chr4 + 94230402 24158047 24158046 24158223 24158047 24158046 24158223 177 TTTGTAATCAAGTAATTTCAATATTCT--GAAATCTGAAATCTGTAATACCATTTCATAGAAAATAACAGAATCTTTTAAACACATACAGAGCAAGCTGAAGATACTTGGTTTCAGTACTT-------TACAGTGAT-GTTTATAAGAGATCTCTTAGGGCATCTATTGGGGAATCTTAGTATTGCA ...:x.:.:x:.....x.:..x.....--.:.....:...-..:.:..:.:.....x..-------.:x...::..xx...x.x.x.xx:x.x:.x:..xx...:..::.x:xx.xx....-------..x....x.-..x.x.......x...................xxx..x..:........ 27M2D11M1I18M7I55M7D9M1D49M 115/169 68.0% 177/94230402 0.0% 18/169 10.7% 138010978 52203577 +3248 chr4 + 190214555 162204684 162204683 162204784 101 TGGAAACCACCTA-ACTGTTCATGGACGTGTTTTCTTCACATCCTTTTTTTTTCTTTTTTCTTTTTTTTATTTTATTATTATTATACTTTAAG-TTTTAGGGT chr4 + 94230402 49122553 49122552 49122655 49122553 49122552 49122655 103 TGGGAACTGCATGTATTCTCTGTGGAAATGTTTGCTTTCTTCTCTCTTTTTTTTTTCCCTTTTTCTTTAAATTTGTTTTTATTATATTGGAAGATTTTATGGT ...:...::.x.:-.:.x.:::....x:.....x...:x:x::..:.......:..:::.:...:...x.x...:..x........:.xx...-.....x... 13M1I79M1I9M 67/101 66.3% 103/94230402 0.0% 2/101 2.0% 113082131 77132424 +3011 chr4 + 190214555 162247924 162247923 162247970 47 AAGAAAGGTAATATTCAGTTTCAGAACTTGGAAATAAAGCAGAAACA chr4 + 94230402 15902478 15902477 15902524 15902478 15902477 15902524 47 AAGAAAGGCAAAGTTTCATTACAGAATTTGGGAATAAAGCAGAAACA ........:..x:..:x:..x.....:....:............... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 146345446 43869109 +3343 chr4 + 190214555 162266698 162266697 162266806 109 ACATTGTCTCTCTCTCTCTCTCTC--------TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATATATACACATATATATGT chr4 + 94230402 4618330 4618329 4618433 4618330 4618329 4618433 104 ATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-----TATATAT-------TATATGT .:.....xx..x.:.:...:...:--------.......::..............::x...::......x.x......-::.:.x.:....-----.......-------....... 24M8I46M1D12M5D7M7D7M 74/96 77.1% 104/94230402 0.0% 21/96 21.9% 157648368 32566187 +3344 chr4 + 190214555 162266702 162266701 162266832 131 TGTCTCTCTCTCTC------TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATACACACA-CACATATACACATATATATACACATATATATGTATATATATACACACACATATATACCT chr4 + 94230402 4618340 4618339 4618475 4618340 4618339 4618475 136 TGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT-TATATGT-TGTACTAATA-ATACGGAGATAGATAAGGATTTATCTATGCTT ...:.:...:...:------.x.......::..............x:....::......x.x......-....x.:.:.-:.:....-:.:..:.-.:...xx...-...:.x.x...x...x:x.:x:..x...:.:. 14M6I48M1I10M1I7M1D7M1D10M1D32M 91/128 71.1% 136/94230402 0.0% 11/128 8.6% 157648362 32566193 +3283 chr4 + 190214555 162266718 162266717 162266788 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.......:.:....:.:.:.:::....x:x:.x...:.:x:.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 101435188 88779367 +4004 chr4 + 190214555 162266720 162266719 162266808 89 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATA-----TATACACATATATATGTAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.:.......:.:....:.:.:.::.....x:x:.x.....:x....-----.:.:.:...:.:.:.:... 70M5I19M 64/89 71.9% 94/94230402 0.0% 5/89 5.6% 101435190 88779365 +4351 chr4 + 190214555 162266722 162266721 162266810 89 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATATA-----TACACATATATATGTATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............:.:.......:.:....:.:.:..:.....x:x..x.:....x....-----.:::.::..:.:....... 70M5I19M 66/89 74.2% 94/94230402 0.0% 5/89 5.6% 101435192 88779363 +4135 chr4 + 190214555 162266724 162266723 162266814 91 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATATATACA---CATATATATGTATATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x...........x.:.:.......:.:....:.:....:.....x.x..x.:.:..x....::---::.::::....:.:..... 72M3I19M 65/91 71.4% 94/94230402 0.0% 3/91 3.3% 101435194 88779361 +3745 chr4 + 190214555 162266726 162266725 162266817 92 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATATATACAC-ATATATATGTATATATATACA chr4 + 94230402 60831530 60831529 60831622 60831530 60831529 60831622 93 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATA ...x.....x.........x.x.:.:.......:.:....:......:....:x.x:.x...:..x..:.:-:.x.:.::.:..:.:.:..:. 71M1I21M 63/92 68.5% 93/94230402 0.0% 1/92 1.1% 101435196 88779359 +3059 chr4 + 190214555 162266797 162266796 162266842 46 ATATATATGTATATATATACACACACATATATACCTTCTGAATCAT chr4 + 94230402 41650596 41650595 41650641 41650596 41650595 41650641 46 ACATATATATATATATATACACACACACACGTATCTTATGAGTTAT .:......:..................:.::..:...x...:.:.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 120616201 69598354 +3145 chr4 + 190214555 162276374 162276373 162276452 79 TGAGTGTGTGTGTGTATATATATATATATATATATATGTGTATATATATGAAATTTCAGTTAGATTGTTTTTGTAAGCA chr4 + 94230402 34522012 34522011 34522090 34522012 34522011 34522090 79 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTTAAACA ..x........:...:........:.:.x.x.xx.xx:........x...x:x...xxx...x:........x...:.. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 127754362 62460193 +3215 chr4 + 190214555 162292512 162292511 162292572 61 ATATATACATATACTGTGTACACACATACATGTATGTGTATACACATGTATATATACATGT chr4 + 94230402 33416729 33416728 33416789 33416729 33416728 33416789 61 ATACACACAGACACTGGATATACATATATATATATCTGTATACACATGTCTGCACGTATGT ...:.:...x.:....x:..:...:...:..:...x.............x.::.:::.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 128875783 61338772 +3045 chr4 + 190214555 162292883 162292882 162292947 65 TATATGTATAGAGACATATATACACATACATATGTATATACACATGTATACACACAAGTGTATTT chr4 + 94230402 70600711 70600710 70600775 70600711 70600710 70600775 65 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGTTT .:.:..::...:xx...:..:..x:.......::......x.....:.:.....x:x....:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 91692172 NA +3652 chr4 + 190214555 162293082 162293081 162293208 127 ATATACATATATATGTGTATATATGTGTATATATGTATATACACACATGTGTGTATATGCATATATGAGCATGTGTGTATATATGTACACACGCATGTGTGTATACGTATAC--ACATGTGTGCATATG chr4 + 94230402 21109187 21109186 21109303 21109187 21109186 21109303 117 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCA------------CATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ..x.:.x....:......:.x.x....x:::...x.....::..x..------------......:xx.::.::x.:..::.......x..:..x.x........:..:..:--.:...::....:.:. 47M12D53M2I15M 77/115 67.0% 117/94230402 0.0% 14/115 12.2% 141183895 49030660 +3528 chr4 + 190214555 162293091 162293090 162293265 175 TATATGTGTATATATGTGTATATATGTATATACACACATGTGTGTATATGCATATATGAGCATGTGTGTATATATGTACACACGCATGTGTGTATACGTATACACAT-----------GTGTGCATATGCGTATATGTATATACACATATGCGTGCATATGCGTATATGTATATACACATATGCGT chr4 + 94230402 79265520 79265519 79265677 79265520 79265519 79265677 158 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACA------------TATTTGTGTCCACA---ACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA-------------GCACTTGTATTTATACATTTATGAGT .:.:.....:.::......:.:xx..........:...:.....:.:.:...x.:.------------...x.:...x....---.:::x.x....::x..:...x.-----------....:..x....:.x.x....x:.:.x..-------------..::x.:.:.x......:x....x.. 56M12D14M3D22M11I29M13D26M 100/147 68.0% 158/94230402 0.0% 39/147 26.5% 83027571 NA +3134 chr4 + 190214555 162293105 162293104 162293165 61 TGTGTATATATGTATATACACACATGTGTGTATATGCATATATGAGCATGTGTGTATATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.:....:...:.:..............:..:..x:x::x.:.:............ 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 106598657 83615898 +3934 chr4 + 190214555 162293244 162293243 162293398 155 ATATGTATATACACATATGCGTGCATATGCGTATATGTATATACACATATGTGTGCATATGCATATATGTATATGTGTATGTATGTAAATATGCATATGTGTATATGTGTACATACATATACACACATATATGTATATGTGTATATATGTGTACA chr4 + 94230402 21109187 21109186 21109328 21109187 21109186 21109328 142 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACAT------------ATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTGTACA ..x..:x......::.:..:x.x::.:x......x.:...:...x..:..------------...:x:..:..:x.:..:.......xx:....x.x..............::x.:..::.::....::x:xx..:.-..x.x.:.:x....... 50M12D75M1D17M 91/142 64.1% 142/94230402 0.0% 13/142 9.2% 141184057 49030498 +3600 chr4 + 190214555 162293259 162293258 162293420 162 TATGCGTGCATATGCGTATATGTATATACACATATGTGTGCATATGCATATATGTATATGTGTA-------TGTATGTAAATATGCATATGTGTATATGTGTACATACATATACACACATATATGTATATGTGTATATATGTGTACATGCATATACACATATATGTATA chr4 + 94230402 79265524 79265523 79265678 79265524 79265523 79265678 155 TGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC---TTTGCCTTTTTGAGTGTACAAAT----GCATTTCTGTAAGTGCTCA-------GCACTTGTATTTATACATTTATGAGTA .:..:......:..:..:xx..........:.:.:.......:.:...x.:..:.x.:...x:.-------.x...:.....:::.---.x..:x.x.x..x:::....x..----:...x.x....x:..:x:.-------.:..x..:..x..:....x....x:.. 64M7I15M3D23M4D19M7D27M 98/148 66.2% 155/94230402 0.0% 21/148 14.2% 83027735 NA +3315 chr4 + 190214555 162293391 162293390 162293449 59 TGTGTACATGCATATACACATATATGTATATGTGTGTGTATATGTACACACACACACAC chr4 + 94230402 47135177 47135176 47135235 47135177 47135176 47135235 59 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGC ......:.......:...::x..xx..x.....:::.....:...::..........:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 115158214 75056341 +3096 chr4 + 190214555 162311404 162311403 162311473 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 86278207 NA +3774 chr4 + 190214555 162323159 162323158 162323274 116 TTCCAGATCACATCCATGAGAGAAAGACCCATAACGCTGTTTCTCCAGACAGGGATGTTGATTGCTTTCATGTACTTAATGTTGGG----TGTGATGTAATCAGCTTTTTCGTGATTCCT chr4 + 94230402 46119588 46119587 46119706 46119588 46119587 46119706 119 TCCCAGACCATATAGATGAGCGGACAGTTTGTAACGCTATCGCACCTGAAAAGGATGTGGATGGATTTCATATTATTAACGTTGGACGTCTGTGTCTCGATCAGCCTTCT-GTAATACCT .:.....:..:..xx.....x.:.x::::::.......:.:x.x..x..x.:......x...x.x......:.xx....:.....:----....x:x::......:..:.-..:..x... 86M4I20M1D9M 77/115 67.0% 119/94230402 0.0% 5/115 4.3% 116203571 74010984 +4902 chr4 + 190214555 162323619 162323618 162323745 127 CAGGCATTCCAAATCTGATCACAGCAGATAT---CAAGGGAGGAGAAGCAATCATTGACATGAGAATACATAGAGTTCAAGATCCCATAATTGCTAAACCCAAGTTGGTTGGAGATGTGGATTTTGAAGG chr4 + 94230402 46128893 46128892 46129022 46128893 46128892 46129022 130 CAGGTATCCCGAAGTTGATTACAACCGATATGGTCAAAGAAGGTGCAGCTGTGATAGATGTAGGCATCAATCATATCCACGATCCTCTAACTGGAAAGACCAAATTAGTTGGGGATGTGGACTTCGAAGG ....:..:..:..x:....:...:.x.....---...:.:...x.x...x:.x..x..::.::.x..xx..x:x:.:..x.....:x...:..xx..:x....:..:.....:........:..:..... 31M3I96M 86/127 67.7% 130/94230402 0.0% 3/127 2.4% 116194726 74019829 +3244 chr4 + 190214555 162324409 162324408 162324523 115 ATATGTATATATGTGTATATATGTGTATATATATGTGTATATATGTATATATGTATATATAT--GTGTATATATGAATATATA--------TGTGTATATATATGTGTATATATATATATATGTG chr4 + 94230402 21109179 21109178 21109303 21109179 21109178 21109303 125 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ...x.x.x..x..:x....:......:.x.x.:..x.::...x.:...:..:x:.:.....:--.....:x...:x:...:..--------.x...:.....:...:.:x....::..::.:::. 62M2I19M8I34M 74/115 64.3% 125/94230402 0.0% 10/115 8.7% 141215230 48999325 +3292 chr4 + 190214555 162324412 162324411 162324511 100 TGTATATATGTGTATATATGTGTATATATATGTGTATATATGTATATATGTATATATATGTGTATATATGAATA--------TATATGTGTATATATATGTGTATATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:..:..:.....x.x.:..x.::...x...:....:x:.::....:x:..:..:x...::....:..:xx..:--------...........:x.....::.::.:. 74M8I26M 64/100 64.0% 108/94230402 0.0% 8/100 8.0% 141215218 48999337 +3298 chr4 + 190214555 162351915 162351914 162352024 110 CTGGCATATATATATATATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATATACACACATATATATATACACACATATATATATATATA chr4 + 94230402 21109192 21109191 21109301 21109192 21109191 21109301 110 CTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x::.:..:.:.:.x.x....x.::...x........:x:.:.....:x.:.:..:x.....:...:..:x:.::.x:x.:.:.....::::.::x....::..::.:. 110M 63/110 57.3% 110/94230402 0.0% 0/110 0.0% 141242723 48971832 +3000 chr4 + 190214555 162351980 162351979 162352035 56 ATATATATACACACATATATATATACACACATATATATATATATATATATATATAT chr4 + 94230402 74526074 74526073 74526129 74526074 74526073 74526129 56 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ..x:.:.:.......:..:x.:.......x.......::.......:...x..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 87825906 NA +3649 chr4 + 190214555 162376348 162376347 162376527 180 GTTAGTTCCTTGCTTTTATCTTGTGTTTGTAGAAAGATATACTTTGTAAGCAAATAAAATATTTCTTCCTTTCAATTCGTAGAATATTTTCTTCCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTT----CTTTCTTTCTTTC----TTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTT chr4 + 94230402 63697069 63697068 63697239 63697069 63697068 63697239 171 GTAATTTCCATGCTTTCTTATTATATTT--AAATGTGAGTACTCCACAGAC----------TTTATTCCTCTCCTTTCC---GGTGTTTTCT--CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x.x....x......:x.x..:.:...--.:.x:x:x:....::::.::.----------...x.....:..xx...x---::.:......--....:....:.:x..:....x....xx.....x.:.----.:..:x:.:....----.:.:.:...::...::..........:....:.x... 28M2D21M10D18M3D10M2D36M4I13M4I37M 109/163 66.9% 171/94230402 0.0% 25/163 15.3% 98679279 91535276 +3822 chr4 + 190214555 162376403 162376402 162376581 179 AAAATATTTCTTCCTTTCAATTCGTAGAATATTTTCTTC-----CTTTCTTTCTTTCTTTTTCTTTTT--------------------CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTT chr4 + 94230402 63697029 63697028 63697233 63697029 63697028 63697233 205 AAAATGTTTACCCTCTTAGGGTTACTGAGTATGAATTTCAGTAATTTCCATGCTTTCTTATTATATTTAAATGTGAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTT .....:...x::.::..x::x.:::x..:...xxx:...-----:..:.x.x.......x..x.x...--------------------....x..:..:..-....:xx:x..:.:.....:......:x..::.:.x....xx...:.x....xxx:::..x....:.:x.xx.:.:.:...:..:.::..:.......:.... 39M5I24M20I13M1I103M 111/179 62.0% 205/94230402 0.0% 26/179 14.5% 98679374 91535181 +3933 chr4 + 190214555 162376430 162376429 162376608 179 AATATTTTCTTCCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTT----TCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTT--TCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTT------------TCCTTTCTTCCTTTCTTTCTTTCTTTCT chr4 + 94230402 67728272 67728271 67728468 67728272 67728271 67728468 197 AATATTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTT ..........x...x....:....xx:..::..x.......x.x...----:::..:...:.::.:.x.x::...::.x.x.....::..x:.:x...x..x..x.:::.x:.x.....::--....:.x.:::xx.:.....:..x.::::.:.x.------------...xx..:...:..xx:..:..:...:. 47M4I70M2I34M12I28M 109/179 60.9% 197/94230402 0.0% 18/179 10.1% 94648158 NA +4290 chr4 + 190214555 162376433 162376432 162376553 121 ATTTTCTTCCTTTC-TTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT--CTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTT chr4 + 94230402 63697116 63697115 63697239 63697116 63697115 63697239 124 ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:...x.....:..-....:xx:x......:...:....:.:x..::.:.x....xx.....x.:.:xxx....--....:.:x.xx.........::.:..:......:...:....:.x... 14M1I59M2I48M 83/121 68.6% 124/94230402 0.0% 3/121 2.5% 98679317 91535238 +4203 chr4 + 190214555 162376440 162376439 162376572 133 TCCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTT--------CTTTCTC--TTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTT chr4 + 94230402 50176284 50176283 50176426 50176284 50176283 50176426 143 TCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .........:....x.::x:.:x:..:.x:x..x:.:.:.:.x..::..x:x...x..:..x:..............:--------.:.:.:.--......x::.:....:.........::.:.x......x:x.x.:.... 78M8I7M2I48M 87/133 65.4% 143/94230402 0.0% 10/133 7.5% 112200156 78014399 +3548 chr4 + 190214555 162376442 162376441 162376559 118 CTTTCTTTCTTTCTTTTTCTTT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..:...:.xx.-..:.:.....:....:.:x..::.:.x....xx.....x::.:xxx.:..:x:.:....x.xx....:..:..::.::..:.:.:.:..:....:. 22M1I96M 72/118 61.0% 119/94230402 0.0% 1/118 0.8% 98679325 91535230 +3069 chr4 + 190214555 162376445 162376444 162376500 56 TCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 + 94230402 66421027 66421026 66421082 66421027 66421026 66421082 56 TTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTCCT .:....:.......:......x......::...x....:x....:.::.:.:..:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 95955418 NA +4021 chr4 + 190214555 162376455 162376454 162376567 113 TTTTTCTTTTTCTTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCT chr4 + 94230402 63697119 63697118 63697235 63697119 63697118 63697235 117 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..x...:.:.:.....:----..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x....:.:x.xx....:..:..:::::................:. 17M4I96M 74/113 65.5% 117/94230402 0.0% 4/113 3.5% 98679336 91535219 +3250 chr4 + 190214555 162376470 162376469 162376586 117 CTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCCTTT chr4 + 94230402 63697117 63697116 63697234 63697117 63697116 63697234 118 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ....x..:..:..-....:xx:x..:.:.....::...:.:x..::.:.x....xx.:.:.x:...xxx:.:..x....:.:x:xx.:.:.::..::.:..:..........:.:... 13M1I104M 70/117 59.8% 118/94230402 0.0% 1/117 0.9% 98679353 91535202 +3356 chr4 + 190214555 162376474 162376473 162376567 94 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCT chr4 + 94230402 38895898 38895897 38895991 38895898 38895897 38895991 94 CTTTGCATCACCTCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCT ....x:x..x::::.::....::..x.x..::x...:...:..:......x.x........:.......x:x.x:.x:....::..:.::.... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% 123480576 66733979 +3007 chr4 + 190214555 162376492 162376491 162376531 40 TTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTC chr4 + 94230402 37318513 37318512 37318552 37318513 37318512 37318552 40 TTTTCCCTTCCCTTCTTTCCTTCTTTCTTTCCCTTTCTTC ..:.::...:.........:...........:........ 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% 125057979 65156576 +3128 chr4 + 190214555 162376497 162376496 162376568 72 TCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTT chr4 + 94230402 90788251 90788250 90788322 90788251 90788250 90788322 72 TTTTGACCTCTTTTTTTTTTTCTTTTTCCTTCTTCCTTTTTTCCTATAAGGCTTGTTTGTTCCCCTTTGTTT .:..xx.:.....:...:.......:..:..........:.....x.xxxx...x..:x...::.:..x:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 71588246 NA +3034 chr4 + 190214555 162376535 162376534 162376598 64 TCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCCTTTCTTCCTTTCTTT chr4 + 94230402 90788259 90788258 90788322 90788259 90788258 90788322 64 TCTTTTTTTTTTTCTTTTTCCTTCTTCCTTTTTTCCTATAAGGCTTGTTTGTTCCCCTTTGTTT ....::...:..........:..........:.....x.xxxx...x::.x.:::.....x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 71588276 NA +3060 chr4 + 190214555 162376545 162376544 162376627 83 TTTCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCCTTTCTTCCTTTCTTTCTTTCTTTCTTTTGTTTGCTGTAGGGCCA chr4 + 94230402 31616227 31616226 31616309 31616227 31616226 31616309 83 TTTCTGTTTGTAACCTCCTCTCTGTTTTTCATGCTTTGTTGGGTTTTTTTTTTTCCTTCTTTGTTTTGTTTATGTTTGGGTCA .....x...x.xx.:....:...x::....x.x....x:.xxx..::...:....:......x........::xx.x...:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 130760318 59454237 +3086 chr4 + 190214555 162379562 162379561 162379638 77 GTTGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x.::.x.:..:.:...........::........x.xx.x...xx:.x............x:xx:..:..:.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 86346361 NA +3035 chr4 + 190214555 162379693 162379692 162379747 55 CTAAAAACAAAAACAAACAAACAAACAAAACAAACAAACAAAATTATATATAATT chr4 + 94230402 70955630 70955629 70955684 70955630 70955629 70955684 55 CTAAAAACTAAAAAGAACAAACAAACAAAACAACAAAAAAAAACTGTAGAGTATT ........x....x:..................xx...x....:.:..x.xx... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 91424063 NA +3299 chr4 + 190214555 162385674 162385673 162385719 46 TATGTTTTCTCTCTCTCTCTCTCTCTGTCACACACACACACACACA chr4 + 94230402 75248043 75248042 75248088 75248043 75248042 75248088 46 TAAATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x:.::.::................x................... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 87137631 NA +3188 chr4 + 190214555 162385680 162385679 162385721 42 TTCTCTCTCTCTCTCTCTCTGTCACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::..............x..x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 87137633 NA +3091 chr4 + 190214555 162385684 162385683 162385719 36 CTCTCTCTCTCTCTCTGTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ................x........:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 149784380 40430175 +3331 chr4 + 190214555 162390979 162390978 162391073 95 AAAGAAAGAAGCAAATA----AAGGAAGGGAGAAAAGAGAAAATAAAAAAAGAAAGAAAAAAAGAAAGAAAGGGAAAATGA----AGGAAGGAAGAAGAGGGA chr4 + 94230402 23740135 23740134 23740237 23740135 23740134 23740237 103 AAAGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAGTAACTATGACTGCGGGAAAAGAAAAGTGGGA ....x..x.:.:x....----....x..:.:.:...:.:....x........:.x.x.....x.x.......x:.xx....----:....:::.:...x.... 17M4I60M4I18M 68/95 71.6% 103/94230402 0.0% 8/95 8.4% 138650844 51563711 +3327 chr4 + 190214555 162391007 162391006 162391086 80 AAAAGAGAAAATAAAAAAAGAAAGAAAAAAAGAAAGAAAGGGAAAATGAAGGAAGGAAGAAGAGGGAAAGA----GAGGAAAGG chr4 + 94230402 49908301 49908300 49908384 49908301 49908300 49908384 84 AAATGTAAAGGGGAAAAAAGAAAGAAATAAAGAAGAAAAGGATAAATAAATGAGGTAAAATGAAGGTTAAATTAGGAGGAAAGG ...x.x:..::x:..............x......::.....:x....:..x..:.x..:.x..:..xx.:.----......... 71M4I9M 58/80 72.5% 84/94230402 0.0% 4/80 5.0% 112482706 77731849 +3008 chr4 + 190214555 162391016 162391015 162391090 75 AATAAAAAAAGAAAGAAAAAAAGAAAGAAAGGGAAAATGAAGGAAGGAAGAA--GAGGGAAAGAGAGGAAAGGAAAA chr4 + 94230402 69368735 69368734 69368811 69368735 69368734 69368811 77 AATGAAGAAAAAGAGAAAAGAGAGGAAAGGGGGAGAATGGTGGAGGGAAGAAAGAAATGACATAGGGATAAAGAAAA ...:..:...:.:......:.::::.:.::....:....:x...:.......--:.:x..x.x..:.:x..:..... 52M2I23M 50/75 66.7% 77/94230402 0.0% 2/75 2.7% 93022281 NA +3231 chr4 + 190214555 162400400 162400399 162400468 69 CATGGTGGCGGGCACCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAAGAGAATGGCGTGAACCCAGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::....:.--...x................:.::........x.xx.x...xx:.x.........:. 10M2D57M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% 86367203 NA +3014 chr4 + 190214555 162409783 162409782 162409829 47 CACATCTAGAACTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTT chr4 + 94230402 36618094 36618093 36618140 36618094 36618093 36618140 47 CACTTCTAGCATGTTTTCTTTTTCTTTTTTCTTTCTCCTTTTTATTT ...x.....x.:x.....................:.::.....x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 125791689 64422866 +3554 chr4 + 190214555 162410145 162410144 162410240 96 CTCTCTGTTTCTCTCTCTCTCTCTATATATATATATATGTACACACACACACACACACACACACACATAC-ATATATACACACATACACATATATTT chr4 + 94230402 60831531 60831530 60831627 60831531 60831530 60831627 97 CTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTTCT ..x...x.x.............x.:.......:.:...::......:.....x:x:.x.:...:x:...:-:.x.:.:.:..::.::::....x.:. 70M1I26M 63/96 65.6% 97/94230402 0.0% 1/96 1.0% 101578614 88635941 +3367 chr4 + 190214555 162410146 162410145 162410212 67 TCTCTGTTTCTCTCTCTCTCTCTATATATATATATATGTACACACACACACACACACACACACACAT chr4 + 94230402 60831534 60831533 60831600 60831534 60831533 60831600 67 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT .......:...........x.x.......:.:....:::....:.....x:x:.x.:...:x:.:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 101578612 88635943 +4004 chr4 + 190214555 162410146 162410145 162410240 95 TCTCTGTTTCTCTCTCTCTCTCTATATATATATATATGTACACACACACACACACACACACACACATACAT-ATATACACACATACACATATATTT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTT ...x.x.:.x.............:.:.......:.:.:.........:.....x:x:.x.:...:x..:..-:.x.:::.:...:::::....... 71M1I24M 65/95 68.4% 96/94230402 0.0% 1/95 1.1% 101578616 88635939 +4338 chr4 + 190214555 162410148 162410147 162410246 99 TCTGTTTCTCTCTCTCTCTCTATATATATATATATGTACACACACACACACACACACACACACATACATATATACACACATACACATATATTTATATTT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTC---TGTGCGCATGTGTGTATATTT ...:.:...x...........x.:.:.......:....:........:.....x:x:.x.:....x:....:xx.---::.:.:...:.:.x....... 75M3D21M 69/96 71.9% 96/94230402 0.0% 3/96 3.1% 101578618 88635937 +3417 chr4 + 190214555 162410154 162410153 162410220 67 TCTCTCTCTCTCTCTATATATATATATATGTACACACACACACACACACACACACACATACATATAT chr4 + 94230402 60831534 60831533 60831600 60831534 60831533 60831600 67 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT .....x.........x.x.:.:.........::.:........:.....x:x:.x.:.:.:x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 101578620 88635935 +3219 chr4 + 190214555 162410187 162410186 162410247 61 ACACACACACACACACACACACACATACATATATACACACATACACATATATTTATATTTA chr4 + 94230402 74526066 74526065 74526126 74526066 74526065 74526126 61 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ....xx.x.:x...............:x.:...:...x.:...:..:.....x.:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 87884121 NA +3249 chr4 + 190214555 162424063 162424062 162424182 120 CAAAAAAAAAAAAATATAT-ATATATATATATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACGTATATATGTG chr4 + 94230402 54005666 54005665 54005783 54005666 54005665 54005783 118 CAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGC---TTTATACATGTG ..:..xx..x...x.....-:x.:.:....:..:x......:...:............:x.x..x...x:xxx.::...x.x.xx..:......:..x:...xx:.---:x....:..... 19M1I86M3D12M 78/117 66.7% 118/94230402 0.0% 4/117 3.4% 108418397 81796158 +3068 chr4 + 190214555 162472057 162472056 162472103 47 TTGAAGAAATACAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 14241141 14241140 14241187 14241141 14241140 14241187 47 TTGAAGATACAGAAGACTTTTGTTTTTCTTTTTCTTTTTTCTTTTTT .......x.:.x.:.......x.....:.....:......:...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 148230916 41983639 +3563 chr4 + 190214555 162483601 162483600 162483701 101 CATGGTGGCGCACACTTGTAATCCCAGCTACTTGGGAGGTTGAGGCCCTAGAATCTCTGAAACCCAGAAGGCAGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:....:--....:.:...........::...:....x..:xx...x.x..x:..........x:xx:..:..:..------:.x...:..... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 86450404 NA +3242 chr4 + 190214555 162486639 162486638 162486720 82 CATGGTGGCAGGCACCTGTAATCCTAGCTACTTGGGAAGCTGAGGCTGGAGAATAACTTGAACTCAGGAGGCGGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::....:--....x....:.:.:.........::.:......x.:x.x...xx........:...:..x:xx:..:..:. 9M2D71M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 86453442 NA +3002 chr4 + 190214555 162498130 162498129 162498182 53 ATATGTATACACACACACACACACACACACACACACACACACACACACACAGA chr4 + 94230402 46140856 46140855 46140908 46140856 46140855 46140908 53 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGA ....:...........x.x....:........::::.:.:...x..x:..... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 116357274 73857281 +3084 chr4 + 190214555 162501875 162501874 162501944 70 TCATCATTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATGTGCATGTGTGTTTGTGT chr4 + 94230402 79265513 79265512 79265584 79265513 79265512 79265584 72 TCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT ...x..x............--........xx...:.:.::..::::.....:.:::...x:::.:....... 19M2I51M 49/70 70.0% 72/94230402 0.0% 2/70 2.9% 83236362 NA +3187 chr4 + 190214555 162507476 162507475 162507535 60 CTCAAAAAACAAACAAACAACCAAGCAACAACAACAAAAAAATTCCCCAGTCATTTATTT chr4 + 94230402 48800711 48800710 48800769 48800711 48800710 48800769 59 CTAAAAGAAAAAAAAAACAACCAACCAACAACAACAAAAAAA-ACCCCAACAATTTGCTT ..x...:..x...x..........x.................-x.....::x....::.. 42M1D17M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% 113706765 76507790 +3170 chr4 + 190214555 162543062 162543061 162543143 82 ATATAAAATGTGTGTGTTTGTGTGTGGAGATACATATATATGTATGTATGTGTGTGTATATATATGTGTGTGTATATATATG chr4 + 94230402 86633916 86633915 86633991 86633916 86633915 86633991 76 ACAAAGAATGAGCGTGCGTGCGTAAG------TATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG .:.x.:....x.:...:x..:..:x.------:....:.x.....::...:...........:..x...:..:..x.:.... 26M6D50M 54/76 71.1% 76/94230402 0.0% 6/76 7.9% 75909146 NA +4947 chr4 + 190214555 162549600 162549599 162549837 238 TTTTTCTCTCTCTT-TCACTCTTTCTCTCTCTCTACATATGCGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TACACACA-------------------CACACAGGATATGGATATACATA---------------------------CACACATATATAGAGATAATATAATATGTAT---ATACATATATATATATCTATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAATGTAATATGTTCTTC chr4 + 94230402 4618321 4618320 4618575 4618321 4618320 4618575 255 TTTTGCCCTATATTGTGGCTGTTTTTCTTTCT-------TGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCGTATTCTATtatatatatatatatgtgttagattacatatacaatacatatatacatatatatatatgtatgtatata---------------------------AAAGAATGTAATATTTGCTTC ....x.:..x.x..-.x:..x...:...:...-------..:.:x..x.......::..............x:....::......x.x......-..:.x.:.-------------------:..xx.x:...:...x...x...---------------------------:.:.:.......x.x:.:x..x.x..::...---...........:....x.......:...:....x.---------------------------.:............x.x.... 14M1I17M7D55M1I8M19I23M27I31M3I35M27D21M 152/204 74.5% 255/94230402 0.0% 85/204 41.7% 157931279 32283276 +3019 chr4 + 190214555 162549632 162549631 162549694 63 TACATATGCGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA chr4 + 94230402 81889421 81889420 81889483 81889421 81889420 81889483 63 TACTTATATTAATCATCCCTCTCTTTTGCTCTCTTTCTCTCCATATATTTTTATGTATGTACA ...x...::xx..:x..:......:.:x......:......:......x.x...:...:..:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 80660211 NA +3224 chr4 + 190214555 162549647 162549646 162549699 53 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............x.x.......:.:....:.:.:.::..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 101718117 88496438 +3449 chr4 + 190214555 162549649 162549648 162549701 53 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............x.:.......:.:....:.:.:..:..... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 101718119 88496436 +3677 chr4 + 190214555 162549651 162549650 162549772 122 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACACAGGATATGGATATACATACACACATATATAGAGATAATATAATATGTATATACATATATATATATCT chr4 + 94230402 60831530 60831529 60831627 60831530 60831529 60831627 98 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC-----------TTCTAAATACAT-------------TTATATGGTCTGTGCGCATGTGTGTATATTTCT ...x.....x.............:.:.......:.:....:.:....:.....-----------x.x..x.....:-------------.x....::.x...::::.::.:.:.....x... 53M11D12M13D33M 72/98 73.5% 98/94230402 0.0% 24/98 24.5% 101718121 88496434 +3491 chr4 + 190214555 162549653 162549652 162549704 52 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACA chr4 + 94230402 60831530 60831529 60831581 60831530 60831529 60831581 52 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA ...x.....x...........x.:.:.......:.:....:......:.... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 101718123 88496432 +3408 chr4 + 190214555 162549655 162549654 162549706 52 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACACA chr4 + 94230402 60831530 60831529 60831581 60831530 60831529 60831581 52 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA ...x.....x.........x.x.:.:.......:.:...........:.... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 101718125 88496430 +3157 chr4 + 190214555 162549731 162549730 162549796 66 ATATAGAGATAATATAATATGTATATACATATATATATATCTATATATATATATATAGAGAGAGAG chr4 + 94230402 81165016 81165015 81165080 81165016 81165015 81165080 65 ATATAGC-ATAAAGTAATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAG ......x-....x:......:..:.x.:......:...x::x..x.....:......:........ 7M1D58M 50/65 76.9% 65/94230402 0.0% 1/65 1.5% 81384715 NA +3257 chr4 + 190214555 162564818 162564817 162564900 83 GGGAAGGGAAGGGAAGGGAAGGGGAGGGGAGGGGTGGGGAGGGGAGGAGAGGGGAGGAAGAAGGAAGGGAAGGGAGAAGGAAG chr4 + 94230402 32265548 32265547 32265629 32265548 32265547 32265629 82 GGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAA-AGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ..:.:.:...x.x.x.x.x..x...:..:..:::-:.:....:..........::...........::x..x:.....:x.:. 34M1D48M 55/82 67.1% 82/94230402 0.0% 1/82 1.2% 130299270 59915285 +4035 chr4 + 190214555 162570850 162570849 162570955 106 ACCTTGGGCAAATTACTTAACCTCTCTGTGCTTCAGTTTTCTCATCTGT-AAATAAAAATAAAAAGAA-TAACTCCTTCATA---GTATTGAGATCAAGATTAAATGAATT chr4 + 94230402 83501142 83501141 83501248 83501142 83501141 83501248 107 ACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTG----AGGCTAAATCAATT ..::...................x.x.....:.........:..:....-....::.:x.:.x.:x..-..x..x.:...:.---......x.----..::.....x.... 49M1I18M1I13M3I8M4D14M 79/102 77.5% 107/94230402 0.0% 9/102 8.8% 79069708 NA +3616 chr4 + 190214555 162580927 162580926 162581010 84 AAAAAAAAAAAAAAAAAAAAAAAGAAATTAAGTTTTGAAAAAAGCTGCTATTTTTTCCTATATGACACAAATGTAAACACTCAG chr4 + 94230402 44228864 44228863 44228945 44228864 44228863 44228945 82 AAGGAAAAAAAAAAAAGGGAAAAGAAA--AAGTATGTAAAAAAGATGCTTTTTTTTCTTCTGTGATGTTAAAATAAACATGTAG ..::............:::........--....x.xx.......x....x.......:.x.:...:::x..x:......:x:.. 27M2D55M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 118352063 71862492 +3029 chr4 + 190214555 162638788 162638787 162638839 52 GTTGCTTATAGTTCTGTATTATTTCCTTTTTTTTTTTTTTTTTTTCTGTGAG chr4 + 94230402 62408953 62408952 62409004 62408953 62408952 62409004 52 GTGGTTCTTTGTTTTGTGTTTTCTCCTTTTTTTTATTTTTCTTTTCTGTGAG ..x.:.:x.x...:...:..x.:...........x.....:........... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 100229835 89984720 +3153 chr4 + 190214555 162641793 162641792 162641861 69 TCTGTCTCAAAGGAAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 62475706 62475705 62475774 62475706 62475705 62475774 69 TCTCATTCAAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG ...xx:.....:.:..:...:..:.:::.:..:x..........:.......x....:::x:::..... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 100166087 90048468 +3109 chr4 + 190214555 162641805 162641804 162641893 89 GAAAGAAAGAA--AGAAAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 51148380 51148379 51148472 51148380 51148379 51148472 93 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAG .......::.:--.x.:...................x....:xxx....--::..x.:..x.x:..::.x:...:.:...:..:....:::.. 11M2I36M2I42M 61/89 68.5% 93/94230402 0.0% 4/89 4.5% 111493425 78721130 +3281 chr4 + 190214555 162641812 162641811 162641930 119 AGAAAGAAAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAATT----AGCAATGAAGGTAGTGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGC-ATGAAGGAAGGGAG ........::..xx.x.....:...:...........x.:.::---.::.xx....x::.:x.x.:.:.:x:::.::...:....:.:..:..::..x.:x...----...-.......x..x... 43M3I58M4I3M1D14M 77/118 65.3% 125/94230402 0.0% 8/118 6.8% 111493433 78721122 +3053 chr4 + 190214555 162641827 162641826 162641905 79 GAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGA chr4 + 94230402 65426282 65426281 65426360 65426282 65426281 65426360 79 GAGAGAAAAAGAGCGAAAAGAGAAAACTGACAAAAACAGAGAAAGAATAATTCAGAAAAATAGATAGGAGAAAGAATGA ........:.:..x....::.::...xx:.x...:.x...:.:.:.:x..xxx.....:.x...x..:........x.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 97215545 92999010 +3239 chr4 + 190214555 162649084 162649083 162649221 138 TTATTCGTGTGTGTATATATATGTGTA----------TATAT---ATACATACATATGTATGTATATATATACACACACACACATGTATGTATATATATACACATACATATGTATGTATATATATACAC---ATACATATGTATGTATATATAT chr4 + 94230402 54005644 54005643 54005796 54005644 54005643 54005796 153 TTACTTATGTGTGTA-ATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGT ...:.::........-..:x...::x.----------.....---.:.....::...x...:....:...:...........x.x:.x...x:xxx.::...x.x.xx..::........x:...xx:.---......:..:xx..x.:.:.:. 15M1D11M10I5M3I84M3I22M 92/137 67.2% 153/94230402 0.0% 17/137 12.4% 108643440 81571115 +3077 chr4 + 190214555 162649131 162649130 162649191 61 TGTATATATATACACACACACACATGTATGTATATATATACACATACATATGTATGTATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.:...:..:...:........:.....:.:...x.x...::.::...:.:..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 106954683 83259872 +3055 chr4 + 190214555 162649209 162649208 162649266 58 TATGTATATATATACACATACATATGTATGTATATATGTATACACACATATATATATA chr4 + 94230402 32795015 32795014 32795072 32795015 32795014 32795072 58 TATGTACATATATATACATACATTGGAATGTATCTATGTACACTAAAATATACAAACA ......:.......:........xx.x......x......:..xx.x.....:.x.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 129854194 60360361 +3550 chr4 + 190214555 162657285 162657284 162657440 156 TCTATAATATAGA----TATAGATATAGATATATGTCTATATATA-------GTCTATAGTCTACTATATATAGTATATATAGTATATCTATAGTATATATAGTATAGACTATATATAGTATATATAGTATAT-----ATAGTATAGACTATATATAGTATATATAGTATAG chr4 + 94230402 26320177 26320176 26320347 26320177 26320176 26320347 171 TCTGTAATGTAGTGTGTCATTAATA-AAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAG ...:....:...x----:..x:...-.:....x.x::.....:..-------..:x...x.:x.::.xx.xx.:.x...x.x::..:.x....x..:....x:....x........:.:.....x..x...:.-----........xx:.xx:...x......:..:..x.. 13M4I8M1D19M7I81M5I34M 104/155 67.1% 171/94230402 0.0% 17/155 11.0% 136337108 53877447 +3220 chr4 + 190214555 162657355 162657354 162657453 99 AGTATATCTATAGTATATATAGTATAGACTATATATAGTATATATAGTATATATAGTATAGACTATATATAGTATATATAGTATAGACTATATATAGTA chr4 + 94230402 26320248 26320247 26320344 26320248 26320247 26320344 97 AATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTG--TATATGTAATA .:.x.....xxx:.:......x..:.x.:........x......:.:.....x..x...:x.::xx...xx:...x.x......x.--.....:..:.. 86M2D11M 67/97 69.1% 97/94230402 0.0% 2/97 2.1% 136337107 53877448 +3121 chr4 + 190214555 162657393 162657392 162657478 86 TATATATAGTATATATAGTATAGACTATATATAGTATATATAGTATAGACTATATATAGTATATATAGTATAGACTATATATAGTA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTG--TATATGTAATA .:......x..:....x:....x........:.:.....x..x...:x.::xx...xx:...x.x......x.--.....:..:.. 73M2D11M 60/84 71.4% 84/94230402 0.0% 2/84 2.4% 136337132 53877423 +3181 chr4 + 190214555 162677652 162677651 162677735 84 TATGTATGTGTATATATATATATGTGTGTATATACATATATACATATACATATGTGTGTGTATATATATATAAAATATATATAT chr4 + 94230402 44815600 44815599 44815672 44815600 44815599 44815672 73 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA-----------ATATAAATTAACTAAACATGT .....:....:...:....:x............x::.x..:.....:...:.-----------.....x..x..x..x.:..:. 52M11D21M 55/73 75.3% 73/94230402 0.0% 11/73 15.1% 117862052 72352503 +3124 chr4 + 190214555 162684356 162684355 162684418 63 GGGAAAAAGAAACAGAAAGAGAGGAGAGGAGAAGTGGGGAGGAGAGGGGAGGGGAAAGAACTG chr4 + 94230402 26216017 26216016 26216079 26216017 26216016 26216079 63 GAAAGAAAGAAAAAGAAAGCGGGGAGGGGAAAAAGAAGGTGGGGAGGGGAGAAGGCAGCACTG .::.:.......x......x.:....:...:..:x::..x..:........::.:x..x.... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 136468339 53746216 +3846 chr4 + 190214555 162686564 162686563 162686633 70 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTTAAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--....:.:...........:.........x.xx.x...x.....:.....:.:.. 14M2D54M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 86653367 NA +3250 chr4 + 190214555 162705027 162705026 162705107 81 ATTTAAGAAAAAAAGATAAGAATAAAAGAAAAAGAATAAAAATAGGATAAAAGAAAGAGGGTTAAGAAG--GAAGAAAGGCTG chr4 + 94230402 4252415 4252414 4252497 4252415 4252414 4252497 83 ATTTGACAAGACAAAACAAGAACCAAGTGCACAGCATAAGAATAGGAGAAAAGGAAGAGGGAGAAAGAGAAAAAGAAAGATTG ....:.x..:.x..:.:.....:x..:x:x.x..x....:.......x.....:.......xx..::..--:.......::.. 69M2I12M 57/81 70.4% 83/94230402 0.0% 2/81 2.5% 158452612 31761943 +3743 chr4 + 190214555 162707519 162707518 162707629 111 TGCGCCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG---------GCAGAGGATGCAGTGAGCCGAGATTGTGCC-----ACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033205 76033204 76033328 76033205 76033204 76033328 124 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC ...:.x...x..:...........::........x.xx.x...x.............:..---------.:...:x...xx.:x.:x.:::xx......-----x....x.-.....x....... 60M9I30M5I7M1D13M 81/110 73.6% 124/94230402 0.0% 15/110 13.6% 86674314 NA +3384 chr4 + 190214555 162707611 162707610 162707724 114 TGCACTCCAGCCTGGTGACAAAGAGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAACTTTAAAGCCACTGTTATTTGTTTTTTTTTTTTTTTTTTCT chr4 + 94230402 59382565 59382564 59382672 59382565 59382564 59382672 108 TGCCCTCTACCCTCAGGA-AAATAGAGACAGGAACAAAAGAAAAAAGGAAAAACAAAATAAGCAAACAGAA-----TTAAATTTCTGTTCTTTTTTCTTTTTTTTTTTTCCTTT ...x...:.x...x:x..-...x......xxx.x.xx..:......::.....x....x...x...x.:..-----.x..:::x.....x...x..:............::.:. 18M1D52M5D38M 76/108 70.4% 108/94230402 0.0% 6/108 5.6% 103325046 86889509 +3208 chr4 + 190214555 162747077 162747076 162747126 50 GAGTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTGAGACACAGTCTC chr4 + 94230402 87529074 87529073 87529123 87529074 87529073 87529123 50 GGGTTTTTTTTGTTGTTGTTTGTTTATTTGTTTGTTGGAATGACAGCTTC .:......x................:..........x..:xx....::.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 75218003 NA +3693 chr4 + 190214555 162812133 162812132 162812274 142 AATGAACAATAAAAGAAATGCAGAATATTGTTGGAAGGAAGGAAGGCAGGCAAAGGAAAGAAAAAAAGAAAGAAAGA-----------------------------------AAGAGAGCAAGAAAGAAAGAAGAAAGAGGAAAGAAAGAAAAAAAGAGA--AAGAAAGAAAAGAAAGA chr4 + 94230402 31955349 31955348 31955522 31955349 31955348 31955522 174 aaccagtattaaaaaaacagctgagcatt-----aaatggaaaaagaaggaaaaggaaagaaaGACGTAAGGAAAGACATCCTAGCTATAGATAGCAAAAAGAGTGAGACACAAGACAATAAGAAAGAAAAGACAAAGAGGAGAGAGAAAACAAGGGAGATTAATGAAGACCAAAAAGA ..:x.::.x.....:..xx..x..::...-----..:x::::..:.x...x............:.x:x..:......-----------------------------------....x.::..........::.x........:...:.:..x..::....--..x:....xx.:..... 29M5D43M35I48M2I17M 95/137 69.3% 174/94230402 0.0% 42/137 30.7% 130856784 59357771 +3222 chr4 + 190214555 162812168 162812167 162812278 111 AGGAAGGAAGGCAGGCAAAGGAAAGAAAAAAAGAAAGAAAGAAAGAGAGCAAGAAAGAAAGAAGAAAGAGGAAAGAAAGAAAAAAAGAGAAAGAAAGAAAAGAAAGAGAAA chr4 + 94230402 43128045 43128044 43128148 43128045 43128044 43128148 104 AGATAAAAAGGTATG--GAGGAAAGGAGAAGAGGAAATAAGAA-----TCAATAAAGAGAGCAGGAAAAAGAAATAACTAGAATGGGTAGATGGAAGAGAAGATAAAGAAA ..:x.::....:.x.--:.......:.:..:..:..:x.....-----x...x.....:..x..:..:.:....x..xx.:..x::.x::.x.:....:....x.:..... 15M2D26M5D63M 69/104 66.3% 104/94230402 0.0% 7/104 6.7% 119684123 70530432 +3517 chr4 + 190214555 162812200 162812199 162812293 94 GAAAGAAAGAAAGAGAGCAAGAAAGAAAGAAGAAAGAGGAAAGAAAGAAAAAAAGAGAAAGAAAGAAAAGAAAGAGAAAGCAAAAAGGAAGAAA chr4 + 94230402 58935722 58935721 58935814 58935722 58935721 58935814 93 GAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAG-TAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAA ...x..:.::..:.x..::.xx...:..:..x:........:....:x..:....-x....:.....:.:.x.:x.x...x:....:..:.... 55M1D38M 63/93 67.7% 93/94230402 0.0% 1/93 1.1% 103876478 86338077 +3160 chr4 + 190214555 162822005 162822004 162822078 74 TACGTACTTTCTATTTTTCTTTCTTTCTTG--TTTTTTGTTTTTTGTTTCTGTTTGTTTTTTGTTTTTTAGTTTTT chr4 + 94230402 72335069 72335068 72335144 72335069 72335068 72335144 76 TGTGTACTTTCTTTTCTTTGGAATTGTGTGGGTTTTTTGTTTTTTGTTTTTGTTAGTTTTTCATTGTTCACTTTTT .::.........x..:..:xxxx..x:x..--.................:....x......::..x..:.x..... 30M2I44M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% 90486936 NA +3104 chr4 + 190214555 162825073 162825072 162825131 59 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x....:.:...........::........x.xx.x...x::........::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 86791867 NA +3597 chr4 + 190214555 162827728 162827727 162827810 83 CATGGTGGTGCATGCCTGTAGTTCCAGCTACTCGGAAGGCTGAGGCAGAAGAATTGCTTGAATCCTGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--................:.:.........x.xx:x...x::......:..x.:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 86794531 NA +3468 chr4 + 190214555 162827997 162827996 162828072 76 GGAGGAAGGAAGGAAGGGAGGGAGAGAAAGAAAGGGAAAGGAAGAAAAAGAAAGGAAGGAAGAAAGAGAAAGAGAG chr4 + 94230402 1500700 1500699 1500770 1500700 1500699 1500770 71 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAA-----AAGGAGAAATAGGG ..:.:.::....:....x:...:..::...x:....:.....:......:.x.....-----..:......x..:. 57M5D14M 52/71 73.2% 71/94230402 0.0% 5/71 7.0% 161327297 28887258 +3290 chr4 + 190214555 162834946 162834945 162835028 83 TATATATATATATATATATATATACACACACACACACACACACAGTTATTTTAAGGCAAGATATTGCTTGTCATGTTGCAACA chr4 + 94230402 41650593 41650592 41650675 41650593 41650592 41650675 83 TAAACATATATATATATATATACACACACACACGTATCTTATGAGTTATTTCAATGCAGTTTTCTTCTTTTGATGTAGCCATA ..x.:.................:..........::.:x:xxxx........:..x...:xx.x:.x...x.x....x..x.:. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 121184353 69030202 +3249 chr4 + 190214555 162834950 162834949 162835059 110 TATATATATATATATATATACACACACACACACACACACAGTTATTTTA-----------AGGCAAGATATTGCTTGTCATGTTGCAACACAGTAAACTGAGTTTTTTTCTATAATGTTAT chr4 + 94230402 4409082 4409081 4409187 4409082 4409081 4409187 106 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAAACAAACAGAGAATTTTCTGC--TCTTGCAACACAGCAGA-------------TATAATGCTAT .:..:.......................x.x.........x..x::::.-----------.::..:::x...x::..:--.x...........:.:.-------------.......:... 49M11I18M2D17M13D11M 71/95 74.7% 106/94230402 0.0% 26/95 27.4% 158425868 31788687 +3261 chr4 + 190214555 162882188 162882187 162882252 65 TAGTGCATGCCTGTAATCCCAGCTACTTGGGACGCTGAGGCAAGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033202 76033201 76033264 76033202 76033201 76033264 63 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:.....:.--....:.:...........::.x......x.xx.x...x.:...........:.. 9M2D54M 49/63 77.8% 63/94230402 0.0% 2/63 3.2% 86848986 NA +3325 chr4 + 190214555 162885204 162885203 162885278 75 GCACCTGTAGTCCCAGCTACTTGGGAGGCGGAGGAAGGAGAATCACTTGAACCCGAGAGGCGGAAGTTGCAGGAC chr4 + 94230402 76033206 76033205 76033280 76033206 76033205 76033280 75 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC ....x......:...........::....x...xxxx.x...x...........:::..x:xx::.:..:..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 86851998 NA +3203 chr4 + 190214555 162912165 162912164 162912239 75 GGTGCACCTGTGGTCCCAGCTACTCAGGAGACAGAGGCAGGAGAATCGCTTGAACCCCGGAGGCAGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x...:..:.........::::..:.x...x.xx.x...x.:.........x.:..x:xx:..:..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 86878962 NA +3363 chr4 + 190214555 162938838 162938837 162938895 58 CTTTCCTTCTTT-TCTTTTCTCTTCCTTTTTTTTTTTTTTCTTTTTGAGACTGGCTCTT chr4 + 94230402 56907965 56907964 56908023 56907965 56907964 56908023 59 CTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTT .......:..::-....:.....::......................:x.xx....:.. 12M1I46M 47/58 81.0% 59/94230402 0.0% 1/58 1.7% 106030873 84183682 +3005 chr4 + 190214555 163034522 163034521 163034585 64 GGAAACAAAGAGAAAAGAAAAGAAGAGAAAGAAAAAAAAGAAAAGAGAAAAGAAAGAAAAGAAA chr4 + 94230402 13176367 13176366 13176430 13176367 13176366 13176430 64 GAAAACAAGGAGGGAAGAAAAGAACAGTAAGCAATGAAAAAAAAAAAAACCCGAAGATGAGAAA .:......:...::..........x..x...x..x:...:....:.:..xxx:....x:..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 149858155 40356400 +3599 chr4 + 190214555 163064269 163064268 163064480 212 GAACCTGAAAGAAAGAAAAAA--------GAAGAAAGAAGAAAAAAGAGAAAAGAAAGAAAAGAAAGAAAGAAGAAGAAAGAAAGAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAA----------GAAAGAAAGGGAGGAAGGAAGAA---AGGATTACCTGGCTGT chr4 + 94230402 23740079 23740078 23740312 23740079 23740078 23740312 234 GAATAAGAGAGCAAGAGAAAATCCTGAATGGTAATGGCAGAAGAAATTGAGAAGTAAAAGCAATAGGTCAATAGGTCAAGGTAGAGGGGAAAAAAAAAAAAAAAAAAGGATGTAAAAATGTAAGAAAGTAACTATGACTGCGGGAAAAGAAAAGTGGGACAAGTGACAGCATGTGAACAAAATTATTTGTTTGAGAAGAAGCAAAGAAAGAAGAGCTTGGGAACATCTAGCTAT ...:xx..:..x....:....--------.:x:.x:.x....:...xx..:...x..:.:x.:x.:.xx.:x..:xx..:.x.::::.....:..:...:...:....:.x.x..:..x.x.......x..xx.x..xx.x::.-.......::x:.:.x:.:x..x..x.x:x...x:...----------..:.::...x:.:...:.....:---:...x:.:..:...:. 21M8I115M1I37M10I23M3I16M 127/212 59.9% 234/94230402 0.0% 22/212 10.4% 139324190 50890365 +3348 chr4 + 190214555 163064331 163064330 163064441 111 GAAGAAGAAAGAAAGAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAA chr4 + 94230402 9363356 9363355 9363466 9363356 9363355 9363466 111 GGAGAAGATGGAGGGTAGGAAAGGAGCCTGTGAAATGGAAAGGAAGCTAAATAACAGGAGAGAAAAAAAGTAAAAGATAATAAGGGGAAGACACAATGAAATTGGAAGGAA .:......x:..::.x.......:..xxx.x:.:.x:.....:...xx.:.x.:x.:..:.....:....x..:.:.x..x:.::.:.:..x.x..x...:xx.:...:.. 111M 68/111 61.3% 111/94230402 0.0% 0/111 0.0% 153700975 36513580 +3433 chr4 + 190214555 163064347 163064346 163064421 75 AGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA .......:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 121952169 68262386 +3115 chr4 + 190214555 163064363 163064362 163064444 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x...........:.x.x.:....x..:::..:.x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 121952185 68262370 +3650 chr4 + 190214555 163064379 163064378 163064459 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAGAAAGAAAGGGAGGAAGG chr4 + 94230402 86089083 86089082 86089163 86089083 86089082 86089163 81 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGG ..:.::.::....:.:x.x.:.:..:...:...:.....x:.:::...x...x........:...x..x..:..x...... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 76975296 NA +3040 chr4 + 190214555 163064385 163064384 163064472 88 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAGAAAGAAAGGGAGGAAGGAAGAAAGGATTAC chr4 + 94230402 49908301 49908300 49908388 49908301 49908300 49908388 88 AAATGTAAAGGGGAAAAAAGAAAGAAATAAAGAAGAAAAGGATAAATAAATGAGGTAAAATGAAGGTTAAATTAGGAGGAAAGGTTAC ...x:x.:.::.:..:...........x.......:....:.x:..x..:x:..:x.:..x...:.xx.::xx:.:..:..:.:.... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 113156084 77058471 +3154 chr4 + 190214555 163075396 163075395 163075465 70 CATGGTGGTGGGTGCCTGTAATCCCAGCTACTTGTGAAGCTGAGGTAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::......x::.--....:.:...........x:.:......x:xx.x...x.:...........:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 87042199 NA +3467 chr4 + 190214555 163075520 163075519 163075576 57 GAGCAAAACTCCGTCTCAAAAAAAAAAAAACAAAAACAAACAACAACAACAAAAAAA chr4 + 94230402 48363371 48363370 48363427 48363371 48363370 48363427 57 GAACAAAATGCTGTAACAAAAAAAAAACCACACAAACAAAAAACAACAACAAAAAAA ..:.....:x.:..xx...........xx...x.......x................ 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 114712149 75502406 +3071 chr4 + 190214555 163075536 163075535 163075580 45 CAAAAAAAAAAAAACAAAAA---CAAACAACAACAACAAAAAAACACC chr4 + 94230402 18496613 18496612 18496660 18496613 18496612 18496660 48 CACAAAAAAAAAACCAAAAAAACCAAACAACAACAACAAAAAAAAACC ..x..........x......---.....................x... 20M3I25M 42/45 93.3% 48/94230402 0.0% 3/45 6.7% 144578923 45635632 +3425 chr4 + 190214555 163076038 163076037 163076107 70 CGCAGTGGCATACCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:......--.:.x.x....:.:...........::........x.xx.x...x..........::.:.. 8M2D60M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 87042841 NA +3567 chr4 + 190214555 163118613 163118612 163118695 83 CGTGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGATGAGGCACAAGAATCACTTAAACCCGGGAGGTAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--......:...........::...x....x.x::x...x.....:.....:.:..x.xx:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 87085416 NA +7192 chr4 + 190214555 163128772 163128771 163129303 532 ACAGAAGGAATCATTTAGT----ATTTTACAGTGTTTTTAAAAATCTAGCTCCATAATCACTCTTGAAAAAAAAAAATCCTTACCACATAATATGAAAA---GTCCACATTTCTCTGGAA------------ATGCATAGTCACCTAA---TAGTAAGGTCCAAAATGAGAA---TTACTATCTCCAGAAGAGGGTGGAGGAGGCAGTGGTGGAGGGGGAGGGGGTGGGGGTAGGGAGTATGGTAAGTTAAGTAATGGATGAGCAGCCATGTTTGGTGTAGCCCAACCCATGTTTACAGGTGGGGGTGGTGGTGGGGGTGGAGGGCGGAGGG-GAAAATTATGCATGTCA------------AACACTGGAAGAGGAAAGGGGTATTGTGGCATAATGGGATTATTTTGTCTCTGAG---AAGGAAATCCTGAAGTCTCCTGAGATACCATATGTTCTGAGTTATAGAAATGCTGAGGT------GGAGGCCTGCCATGGCAAGATCGAGGGTATC--TGGCCCTGGAAA---ATCCTCGTGTGAATTCTCTGTTACGATATCCTTTTGCATGCTCTGAAGCAG chr4 + 94230402 24409641 24409640 24410170 24409641 24409640 24410170 530 ATAGAAAAAAATATTTTGTGGGCATCCCACAAAGTATT---AAACTCTGCTCTTGTTTCATTCTTGCAGAAAAAAATAACCATCTCTAAAACAAGCAAACATGTTCTTCCTCCCCTTAAGCTGCAACATTCTATGCACGTTTATGGAAACTTAGTAAGGCCTGAATTGAGAAGGATGGCTATCT---GGAGGAGGTGGAGGCGGTGGCTGCGGAGGCGGCAAAAATGGA---------TACGATGAGTT--GTA-------------CACATTTGGGCCTGTCCAAATCATATTT-------------------GGATTTAAAGGCGGAAGGTGAAACTGATGCATCTCATTAACAGAACCAAAAACTGGAGGAGGAAAGGGATACTGTTGCATCATTGGATGTTCTTTTCTGTGAGGTTGTGGAAACACTGGAGACTCCTGATGTATCCTGCTGTCTGAAGAGTATAGATGGAGTGGTCTAATGGGTGGTCTA----GGAAATCCTGAAGGTCCTGATGGAGAAGGAAATGGATCCCCA-GAGAATCTTCTGTCATGGTAACCCCTTGAATAACTTGAAGCAG .:....::..x:....x..----..:::...:x..x..---...:::x....:xxxx...:.....x.:.......xxx.:xx.:x:.x..:.x.x...---..:.x:x:.:.:..x:.:------------.....::x.:.:xx..---........:.::..x......---.x:......---.:..::........x..::.:x.:.....x..x:::::...:---------..:.:.:....--...-------------..::.....xx:x.:....x:...:...-------------------..:x.x:.:......:..-....x.x......x...------------..x......:..........:..:...x....x..x....xx.:..x...x....---:x.....:x...:..x.......x:..:.x.::xx.....:xx:..x.:...xx.x...------..x..:..:----..x..xx::..:...x::--...xxxx.....---....:.:-.x....::.....:.:.:..x..::...x..:x::........ 19M4I15M3D58M3I18M12I16M3I21M3I9M3D42M9D11M2D3M13D28M19D18M1I17M12I55M3I59M6I9M4D18M2I12M3I7M1D43M 312/478 65.3% 530/94230402 0.0% 106/478 22.2% 138719131 51495424 +3086 chr4 + 190214555 163131384 163131383 163131435 52 ATATCTCAAAAAACAGACAAAAACAAAAACAAAAACAAAAAAACCTCAGCAA chr4 + 94230402 80728972 80728971 80729023 80728972 80728971 80729023 52 ATATATTAAAAAACAAACAAACAAAACAACAACAACAAAAAAACCCCCACAA ....x.:........:.....x.x..x.....x............:.x:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 82402412 NA +6016 chr4 + 190214555 163133138 163133137 163133269 132 TATTGTATTCACTCACCAGGCTCATTAAATTCAGATTTGAGTTTTTTCCGGCCTTGAATCTGAGATTTTTTCCTCT---GTTTGGCTTCCTTCTCTTTTTCATCATCACTAAAATCTAAGGCCTTGCAGAGAAAA chr4 + 94230402 24412828 24412827 24412962 24412828 24412827 24412962 135 TATAGTATTCACTCACTTGATGCATTTGTATCTGTTTTGACTTTCTTTCTTCCTTGACTCTGTGGCTTCTTCTTCTTTTGTTTTGCCTCTCTTTCTTTTTCATCATCACTGAAGTCCAAGGCCTGGTTAAAAAAA ...x............:x.::x....x:xx..x.x.....x...:..:.xx......x....x.::..:...:...---....x..:..::.:.................:..:..:.......x.:x:.:.... 76M3I56M 96/132 72.7% 135/94230402 0.0% 3/132 2.3% 138720310 51494245 +4968 chr4 + 190214555 163137178 163137177 163137259 82 CATAAAAAGACTTATACTTACCTCTGGTGGTGGTTCCTGATCATTCTTCCATGATGCATCTGATCCCTTATCCCTGAGTGGG chr4 + 94230402 24416193 24416192 24416274 24416193 24416192 24416274 82 CAAACAAAAAATGATAGTTACCTCAGGTGGTGGTTCTTGGTCATTCTTCCAAGATGCATCTGACCCTTTTTCCCTAAAAGGG ..x.x...:.x.x...x.......x...........:..:...........x...........:..:..x.....:.:x... 82M 66/82 80.5% 82/94230402 0.0% 0/82 0.0% 138720985 51493570 +9071 chr4 + 190214555 163140217 163140216 163140395 179 ACTTACTGTTTTAGTTTTTCTGTGAATATATATTGAGTGAAATCTTTCATTGATGGAGCAAAATACATAGTCTCCTTTATTTTAATACCTTTACTCTCAATGTGATCTGAAGAATTAAACCGTAACACATAAAATGGATGTGCAACAGGTCCAAATATCTCGAATATCTGTAATAGAAA chr4 + 94230402 24420682 24420681 24420860 24420682 24420681 24420860 179 ACTCACTGTTGTAGCTTCTCTGCAAATATGTACTGGGTAAAGTCCTCCACTGATGGAGCAAAGTACATGTTGTCTTGCACATTAATACCTTTTGCTTTAATATGTTCAGCGCTGTTAAATCTTAACACATAAAAGGGATGTTGAACAGGACCAAATACCTCAAATACCTGAAACACAAA ...:......x...:..:....::.....:..:..:..:..:..:.:..:............:.....:x.x..:.x:.:x...........xx::.:...:..x..x.x:xx:.....:.x............x......xx......x.......:...:....:...x..:.x... 179M 131/179 73.2% 179/94230402 0.0% 0/179 0.0% 138719535 51495020 +6529 chr4 + 190214555 163145776 163145775 163145962 187 ACAAACCTTTCCTGCTGCTTGTCGATCACTTTTAAAAATTACAGTCTCCTCATTAACTGGAGGTAGGTTAGTCATAGATTCAATTATTACTGA----------AAAATAAAATAGATTACTTCAAGATTTACTTATAAGAGAATGTAG--AATTTTAATGAAAATCTAAGCTTTAATTCCAACATAATTTAAAAAAAAA chr4 + 94230402 24421818 24421817 24422002 24421818 24421817 24422002 185 ACACACCTTTCCTGCTGCTTGCCGATCTTCTTTAAAAATTATGCTTTCCTCATTTATTGGAGGTAGGCCTCTCAGAGATTCAATTATTACTAAAATGGAAAACAAAATCAAATAGA--ACTTTAAGTTGCA---ACAGCAGCATGCAGTTAATTGCAGGAAAA---------CAAATCACACCATCATTTACAAAGCAA ...x.................:.....x::...........::x.:........x.:..........::xx...x................:.----------.....x.......--....:...x.x:.---.:.:x..x...:..--....x:.:x:...---------:x...:x..x...x.....x...:x.. 93M10I13M2D13M3D14M2I13M9D27M 132/173 76.3% 185/94230402 0.0% 26/173 15.0% 138723958 51490597 +6749 chr4 + 190214555 163148338 163148337 163148461 124 TACCTAGTTGTTCAATAATACTTGAAACCATCCCAAGAGGCTTTAACTCAATATCTTCAGGCAGAATAATAGTGAGTTCTTCAACAGAAGGCAGTTCCT--------------ATAATTTAAAACAAAACAAAACATT chr4 + 94230402 24424296 24424295 24424433 24424296 24424295 24424433 138 TACCTAGCTGTTCAATGATACTGGAAACTGTCCCAAAAAGCTTCAGTTCAACATTATCAGGCAGAATTACAGTTAAATCTTCAACAGGAGGCAGTTCCTGAAAATACCAAGTCATTATTCAGAATAAAGTCACACATT .......:........:.....x.....::......:.:....:.::....:..:x...........x.:...x.:x..........:...........--------------..x...:.:..:...::x.x..... 99M14I25M 97/124 78.2% 138/94230402 0.0% 14/124 11.3% 138724042 51490513 +3848 chr4 + 190214555 163168881 163168880 163168963 83 CATGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTCAGGAGGCAAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.:...........::........x.xx.x...x.:.......:...:..x:xx:.....:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 87135684 NA +3025 chr4 + 190214555 163185404 163185403 163185458 55 TGAATTTAAAACCATACTAGAATATTTCTTTCTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 52752915 52752914 52752969 52752915 52752914 52752969 55 TAAGTCTAAAGTCATACCACAGCCTTTTTTCCCTTTTCTTTTTTTTTTTTTTTAA .:.:.:....::.....:.x.::x...:..:.:....:...............:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 110432489 79782066 +3058 chr4 + 190214555 163187822 163187821 163187880 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 87154616 NA +3022 chr4 + 190214555 163207916 163207915 163207964 49 TGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTG chr4 + 94230402 52780462 52780461 52780510 52780462 52780461 52780510 49 TGCTGCACAGAGGCTCCTTAGTTCAGGTCCAGCCTATTTGTCAATTTTG .....:.....:....:......:.:x.xx.x..:.............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 110427454 79787101 +3305 chr4 + 190214555 163213547 163213546 163213610 64 GTGTATATATGCATATATATGTATGGATAGATATCTATATGTGTATATATAGGTATATATCTAT chr4 + 94230402 74593218 74593217 74593281 74593218 74593217 74593281 64 GTATGCATATGCATAAACATGCATAGATAGATATGTATATATCAATTTATATGCATTTATCCAT ..:.::.........x.:...:..:.........x.....:.xx..x....x.:..x....:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 88620329 NA +3495 chr4 + 190214555 163223052 163223051 163223137 86 TGGTATAGTGGTGTGCACCTGTAATCCCAGCTACTAGAGAGGCTAAGGCAGGAGAATCAACTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033192 76033191 76033277 76033192 76033191 76033277 86 TGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..:.xx.xx......x....:.:.........x..:.....:..x.xx.x...x..x:.........:..x:xx:..:..:.. 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% 87189860 NA +3340 chr4 + 190214555 163223196 163223195 163223247 52 AAACAAACAAACAAACAAAAAACAACTACAAAAAAAAAAAAAACATAAAGAA chr4 + 94230402 40057029 40057028 40057080 40057029 40057028 40057080 52 AAACAAACAAACAAACAAAAACGCTCTACAAAAAAAAAAAAAAACTCAAGAA .....................xxxx..................xx.x..... 52M 45/52 86.5% 52/94230402 0.0% 0/52 0.0% 123166167 67048388 +3045 chr4 + 190214555 163223199 163223198 163223252 54 CAAACAAACAAACAAAAAACAACTACAAAAAAAAAAAAAACATAAAGAACCAAA chr4 + 94230402 76741965 76741964 76742018 76741965 76741964 76742018 54 CAAACAAACAAACAAAAAATAACAACAACAACAAAAAAAGCCAAACAAACAGAA ...................:...x....x..x.......:.xx..x:...x:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 86481234 NA +3158 chr4 + 190214555 163230060 163230059 163230165 106 AAAGAAAGGAAGAAAGAAAGAAAGAGGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAGAGAAAGAAAGAAGAAAAAAATAGATTTTTTTAAAGGATAA----AATTATGA chr4 + 94230402 24562506 24562505 24562611 24562506 24562505 24562611 106 AGACAAAGCAGTAAGCAAAGGAAAGAGATGGAAATGGTATGGGTGGGTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGA----TGAAAAGGAGAACATGAATTATGA .:.x....x.:x..:x....:..:::..x...::x:.x.x..:x..:x.....x.......:.....xx.........x:..----.xx......x..----........ 82M4D12M4I8M 71/102 69.6% 106/94230402 0.0% 8/102 7.8% 138667554 51547001 +3008 chr4 + 190214555 163259889 163259888 163259930 42 AAAAAATACAAAAAACAAACAAAAAAAACAACAAAAAGAAAC chr4 + 94230402 70955632 70955631 70955673 70955632 70955631 70955673 42 AAAAACTAAAAAGAACAAACAAACAAAACAACAAAAAAAAAC .....x..x...:..........x.............:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 92304257 NA +3389 chr4 + 190214555 163293225 163293224 163293306 82 GTGGTGGCACGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTGGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....::..........::........x.xx.x...x....x......:.:..x.xx:..:..:.. 6M1D6M4D65M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 87260024 NA +3080 chr4 + 190214555 163324742 163324741 163324780 39 AAAAAAAAAAAAACAAACAAAAACCACCAAAAAACAGAA chr4 + 94230402 47473576 47473575 47473614 47473576 47473575 47473614 39 AAAAAAAAAAAAACAAACAAAAAACACCCAGAAACAGAA .......................x....x.:........ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 115851166 74363389 +68420 chr4 + 190214555 163324990 163324989 163326527 1538 AGTAATACTTTAAAGAAATTTCATTCCAATAAGTACAGTATAAAAGTCTTTATATTATA-TGCATAAATTCACAAAAAG---------CACTTCAA-AGATGTCTGGTCAAAACTATTTCCAGAAGACCCCAAAGCCCA--CACCTTTTGT-------TCCAAATGTAATTA---TGACAACTACAACAA---AAGCAGTAAAAA-GCAAGACAAGAAAATCTTAGTCATTTTCAAATGATTTCAACCCCA-TTCCTTGGGAGAACAGGTAAT------CAAAGTATGT------TGCA-GGTTGTGCTTGTTTTTAAACAGATGTCATCCGGGA--------CCATAGGCTATAAGTAG--------------TTTCAGATTTTTTCATTATCATCATTGTTGTTGATTTTTTTAAATGCGACTGGGCTTGCTTGCTTCAAAGAAGTTTTGGAAACATCTGTGTGCATCGTGGACATGGCTATTGTTTCATAATCATCATCCCGAGACCGGAAATCACAAAAGTTGAAGAAGAACTGCAAGTCTCTCTGGAAGTTTTTGTTCAGGAACCCATAAAATATGGGGTTGACACAAGTGGATATCATTGCTGTGAGGTGGCAGAGCAGGAATAACAGATTGTGGTTGCAGGTAGCAATG------ATCTGATGATTCCAATCAAACACAGTGTTAAAGATGGTAAGAGGGAGCCAGCAGACTGCAAATGCTACCACAATGGAGAGCAGCATGATATTGATTCTTTTGGTTTCACTGGACCTGTACTTATTGTCTCTCATCTTGTCCATCATGTTGTTTCTCCTTTTTAGGCGTATATATATCTATGGAAGAAAAAAGTTTAAATAGAAACACTCATTTGATGAGGAATTCTGTGTAAAG--------------AAGGTAAAAATGGAAATGATAGAAAAAAAG-----------------------TTTTCTTACCTTGAAGTAGCAAATAAATATAAAACAAAGTGGACCAAAATACTGCAGCACCAAGAGGAGAGTGGTATAAGACAACCTATGAGAGTCCGATGGAAATTGATCAAAGCACACGTATTTGTCTTTGTACGCATCAAGTGTTACATTTTGGAACGGCTCATCAGTCATTACTTGGTAGATCAGGAAAGGCAAAGAAGAAGCCACAGCAAGGACCCAAATCACAGCAATACCTACATAAGCATGTCTATTATTTGGTCTCCACCCTCGAGGGTTGATTATCAGCTGATGTCGTTCCACAGCAATGAGAACCAGAGAGAAAATGGACACAGTGATTGAAACACATTGCACAAAAGGATTCAACTTACACATCGCCTCACCAAAGACCCAGTGGTCCATTAATGTGTAGACAAATGTAAAGGGGAGACACATGATGGCAACAAGCAAGTCTGAGAAGGAAAGGTTCACAATCAGGATGTTGGTAACATTTCTCATCTCCTTTTGTTTCAAGATGATTATGATCAAGGCCAGGTTTCCAGAGACACCAAGAATGATCACAGCTCCATAAGCAAGAGCTAAGGTAAATATCATGGCCAAGGGCAGATGACAATCATCATTTTCAAAAGCCAGAAGCTGGGCATTCTTCTCTGAGAAATTAGAGTGGACTGAATGATTTTC chr4 + 94230402 24461797 24461796 24463398 24461797 24461796 24463398 1602 AATAATAACTAAAAAAAATCTAAT--CAATGAATGTA---------TCTTTGTGCTAAAGTACATAACTGTACAAAAAAAAAAAAAAACAGAACAAGAGAAAGTTGATGAAAACCATAGGTAGTAGC-----AAGTCCAGCTACTTTTTATAATAAGATTCAGATATAACTGCTGTGAACATTAAAGCAGTGTAAGGGGCAAAAACGCACAGCATAAAA----------TTTCAAAGTGACAACAATCAAAGTTCCTTGGAAAAAGAAGAAACGCGTTACCCAGTTTGTACTTGTTACATAATTGTGCTTGTCCTTGGGCACATTCCACCTGTGGGCACGCTTTCAAAGGTTTGGTGTAGAATTATTATTACTTCTTTATATTTTGTCATCATCATCACTATTT---ATTTTTTTAAATGCGACTGGGCTTGCCTGCTTTAGAGAGGTTTTTGAGACATCTGTGTGCATGGTGGACATGGCTATAGTCTCATAATCTTCCTCACGGGATCGGAAATGGCAAAAGTGAAATAAAAACTGCAGGTCCCTCTGGAAGTTCTTGTTGAGAAACCCGTAGAAAATAGGGTTCACGCAGGTGGAGATCATGGCAGTGAGGTGGCAGATCAGGAACAGCAGATTGTGGCTGCAAGTAGCAACAGGCAGAATTTCATGGTTCCAATCAAACACGATATTGAAAATGGTGAGAGGAAGCCAGCAAACTGCAAAGGCAACCACTATCGAGATCAGCATGATGTTGATCCTTTTGGTTTCAGAGGATCTGTACTTACTGTCTCTCATCTTGTCCATCATGTTGCTCCTTTTTTTCAAGCGAAAGTATATCTGTGGGA-----AATTCAACAAAGAGAAATGCATGGGAT----AATTTTACCTACAACCGTAGCTATTGCCAAGATAA----GCAAACATCAGACAAAAAGAAGTATATTTCACAGAGGGAGCTCTCTCTTACCTTTAAGTAGCAAATAAATATAAAACAAAGTGGTCCAAAGTACTGAATCACCAAAAGAGTGGTGGTATAAGAAAGCCGGGCAGTGTCCAAGGGGAAGAGGTCCAGGCACACGTATTTGTCCTTATATTCATCAAATGTTATGTTTCTGAAGGGTTCATCTGTCAGCACGTGGTAGATCAGGAAAGGCAAGGAGGAAGCCGTGGCCAAAACCCATATGGCAGCGATCCCCATGTAGGCGTGCCTGTTGTTTGGCCTCCAGCCACGGGGGTTGATGATCAGCTGATGGCGTTCGATAGCAATAAGAACTAAGGAAAAGACCGAGACTGTGATCGAGGCACATTGCACAAAAGGGTTCAATTTGCACATGGCCTCCCCAAAAATCCAGTGGTCCATTAAAGTATACACAAAGGTAAAGGGAAGACACATGATGGTCACTAGAAGGTCAGAAAAGGACAGGTTGACAATGAGGATGTTAGTAACATTGCGCATTTCCTTTTGTTTCAAAATGATGACAATCAGGGCCAGATTCCCAGAGACTCCCAGAATTATCACAGTCCCGTAAGCCAAGGCCAAGGTGAAGACCATGGCCAAAGGCACATGGCAGTCCTCATCTTCAAACTGCAAGATCTGCGAGTTCTTCTCCGAAAAGTTCAGGTGACTGGAATTATTTCC .:.....x:.x...:....:.x..--....:.:.::.---------.....:.::..x.-.:.....x.x:.......:---------..xxx...-...x:x:..:.x.....:..xxx:..x..x-----...:...--:..:....:.-------.:..:..:...:.:---...xx.:..x.:..:---...x:.:.....-...x::..x:...----------...:x..:...:xx...:.xx.-........:.:..x.:.x..:------.xx...x...------.:..-::..........::..:::..x..x:..:.:.x.:--------:..x...:.xx:x....--------------:..:.x.....x....:.......:.:..x---..........................:.....:.:...:.....x..:..............x..............x..:........x..x..x..:..:.......x:.......x:..x..:.......:...:...........:.....x..:.....:..:..x..:.....x..:..:.....x.....x..x.............x......:.:..........:....:.......::------..:.x...:..............::.:..:..:.....:.....:........:........x..x.....x..x....x.........:.....:............xx...:.........:..........................:.:..::....:.:...x.x:.......:...:.-----..x.:x.x.x...:.x.:x...xx...----....:.::x..x.:--------------...:...----.x...::x:...x......-----------------------:.:.........x.............................x.....:.....x.x......:..::x:...........x.:..x:xx..x....:.x..:..xx.:..x.:...............:..:..:x......:.....::...:x...x..:.....x....x:..x....................:..:......:::..x.::.....x..x:....:..x..:.::..:..:..:..:..:.....:.....x..x..:........x...........x.....x.:......:.....:.::..:..:.:x..x..x.....:..::................:.....:..:.....x.....x.....:.:...............x..:..x.....x........:.............:x..x..x.:...x..:.....x.....x.....x........:........x.x...:..............:.....x.::....:......:..:........x..x.....x.......::..:.....x.::..:.....:..x.:.........:....x...:..:..x....:......xxx..::.x...x.x:........:..:..:..x::...:x:x....x....:. 24M2D11M9D13M1I19M9I8M1I30M5D7M2I10M7I14M3I15M3I12M1I13M10D22M1I21M6I10M6I4M1I35M8I17M14I30M3D249M6I184M5D27M4D14M14I7M4D19M23I681M 1133/1496 75.7% 1602/94230402 0.0% 148/1496 9.9% 138863193 51351362 +3110 chr4 + 190214555 163329464 163329463 163329543 80 AGTGGAGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGTGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:--......:.........:.::......x.x.xx.x...x::........::.:..x:xx:..:..:.. 11M2D67M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% 87296264 NA +8306 chr4 + 190214555 163332520 163332519 163332952 433 AGAAGGAAGGGTGGGAATGGAAGGGAGCAGAGTGGGGAAGATCCGCTGGTATTTCTCCTGCTCAGATCCTAAAGATTGATGAAGCTAGGAAGAGACGCCTCCTTAAAGCCGAACTCCACCTCATCCCGG-ATCACGTGACGGCGTCCCGC-GAGTAGCGCCTGAAGCTCCCCCAACCCCACAAACACCTCACA---AAGGTGCACACCTCGGGGAAGCATTGCCTAGGAATTTTGGAAAGAAAAGCAATCCAACAGAAGCCACACATTATTCGACACAGACCTCCCGCGCAGGGGAAAGGAAGCCCTAATCCCCACAGTCCTCGACTCCGGGGAAGG---CAGGGCAGTTTCCCGAGGCTTGAAAAAGTCGGTGCCACTGTGCTTTTCTTTGTTTGCAGGTCAGTGCCATCTTGTGGCC----------GAAGTCATACCCGGCTGGAGAG chr4 + 94230402 24466072 24466071 24466444 24466072 24466071 24466444 373 AGAAGGAATAGGGGAAAGGGAAGG----------------ATCCTCCGATGTGCCTCCAGCTGAGATGCTAAAGATTGGTGAGGAAGGCTGGAGACTCCCCCTTAAAGCCGAACTCCACCTTATCCCAGCATCACATGATGGGGCTCTGCTGAGCAGATCCTGAAAATCT-----CATTGCAAGCACATCACCTTTCAATTACACATCT-GGGGGTGGGTTGCCTAGTAATTCT-GAAATACATGCAATTAAATA---------------TTGAAACAAA-----TGAGGAGGGGAAGAGAG-------------------------CCGAGAAGAGCTCCGGGAGAGATTCTCAACGCTCT---CAGGCAGCTCCGGCG-------CTTTGTTTGCAAGTTATTGCCACCGTGTGGCCAGTCAAGACGGAAGAAAAGCTCAGTTGGAAAG ........x:.x..:..x......----------------....x.:.:.:.x:....x...x....x..........:...:.xx:.xx:.....x..:.....................:.....:.-.....:...:..x.::.:..-...:..xx......:x..:-----.x:::...:...x....x---x.:x.:....:..-....:x.x:........x....:.-....x.x.x.....:x..:.---------------.:..x...:.-----:.x.x.......::..:-------------------------...:.:.::.---.:..:x..x...:.:.x...:x---x..x.:.:x..:x:.-------...........:..:.x.....:.x.......----------....xx.x:.:.:.:....:.. 24M16D89M1I20M1I19M5D18M3I13M1D24M1D20M15D10M5D17M25D10M3I22M3D15M7D32M10I22M 250/355 70.4% 373/94230402 0.0% 96/355 27.0% 138866448 51348107 +3457 chr4 + 190214555 163342925 163342924 163342987 63 TCTACCCAATGTCTCTTTTCTCCCTTCTCTCCTTCTCTCTCTCTCTCTCTCTCACAGACACAC chr4 + 94230402 49829856 49829855 49829918 49829856 49829855 49829918 63 TTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACAC .:.:....x.x::.::...:.::.....:..........:.:.:.:...:......x...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 113513069 76701486 +3128 chr4 + 190214555 163342953 163342952 163342992 40 CTCCTTCTCTCTCTCTCTCTCTCTCACAGACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:.:..................x....x........... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 88094904 NA +3142 chr4 + 190214555 163342954 163342953 163342996 43 TCCTTCTCTCTCTCTCTCTCTCTCACAGACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTC-CTCTCTCTCTCTCTCTCTCACACACACACACACACa ......-.................x..x............... 6M1D36M 40/42 95.2% 42/94230402 0.0% 1/42 2.4% 88094907 NA +3342 chr4 + 190214555 163342955 163342954 163342994 40 CCTTCTCTCTCTCTCTCTCTCTCACAGACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:.:......................x............. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 88094906 NA +3091 chr4 + 190214555 163342959 163342958 163342994 36 CTCTCTCTCTCTCTCTCTCACAGACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ......................x..:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 150741655 39472900 +65064 chr4 + 190214555 163350225 163350224 163351618 1394 TTTTTTTGGTTGCTGACAAATGTCTTT-TTATTCCAAGCAGGACTATAATATGGATTTAGAGCTCGACGAGTATTATAACAAGACACTTGCCACAGAGAATAATACTGCTGCCACTCGGAATTCTGATTTCCCAGTCTGGGATGACTATAAAAGCAGTGTAGATGACTTACAGTATTTTCTGATTGGGCTCTATACATTTGTAAGTCTTCTTGGCTTTATGGGGAATCTACTTATTTTAATGGCTCTCATGAAAAAGCGTAATCAGAAGACTACGGTAAACTTCCTCATAGGCAATCTGGCCTTTTCTGATATCTTGGTTGTGCTGTTTTGCTCACCTTTCACACTGACGTCTGTCTTGCTGGATCAGTGGATGTTTGGCAAAGTCATGTGCCATATTATGCCTTTTCTTCAATGTGTGTCAGTTTTGGTTTCAACTTTAATTTTAATATCAATTGCCATTGTCAGGTATCATATGATAAAACATCCCATATCTAATAATTTAACAGCAAACCATGGCTACTTTCTGATAGCTACTGTCTGGACACTAGGTTTTGCCATCTGTTCTCCCCTTCCAGTGTTTCACAGTCTTGTGGAACTTCAAGAAACATTTGGTTCAGCATTGCTGAGCAGCAGGTATTTATGTGTTGAGTCATGGCCATCTGATTCATACAGAATTGCCTTTACTATCTCTTTATTGCTAGTTCAGTATATTCTGCCCTTAGTTTGTCTTACTGTAAGTCATACAAGTGTCTGCAGAAGTATAAGCTGTGGATTGTCCAACAAAGAAAACAGACTTGAAGAAAATGAGATGATCAACTTAACTCTTCATCCATCCAAAAAGAGTGGGC-CTCAGGTGAAACTCTCTGGCAGCCATAAATGGAGTTATTCATTCATCAAAAAACACAGAAGAAGATATAGCAAGAAGACAGCATGTGTGTTACCTGCTCCAGAAAGACCTTCTCAAGAGAACCACTCCAGAATACTTCCAGAAAACTTTGGCTCTGTAAGAAGTCAGCTCTCTTCATCCAGTAAGTTCATACCAGGGGTCCCCACTTGCTTTGAGATAAAACCTGAAGAAAATTCAGATGTTCATGAATTGAG---AGTAAAACGTTCTGTTACAAGAATAAAAAAGAGATCTCGAAGTGTTTTCTACAGACTGACCATACTGATATTAGTATTTGCTGTTAGTTGGATGCCACTACACCTTTTCCATGTGGTAACTGATTTTAATGACAATCTTATTTCAAATAGGCATTTCAAGTTGGTGTATTGCATTTGTCATTTGTTGGGCATGATGTCCTGTTGTCTTAATCCAATTCTATATGGGTTTCTTAATAATGGGATTAAAGCTGATTTAGTGTCCCTTATACACTGTCTTCATATGTAATAATTCT chr4 + 94230402 24480126 24480125 24481511 24480126 24480125 24481511 1386 TTCCTTCAGTTGCTAATCGTTGCCTTTCTTGTTCTAAGCAGGACTATAAAATGGATTTAGGATTCAAAGACTATACCAACAGGACACCTACCA---AGAACACTTCTGCTACTACAAAGAATTTT------TCTGCCTGGGAGGACTACAAGAGCAGTGTTGATGACATACAGTACTTTCTTATTGGGCTGTACACACTTATAAGTCTGGCTGGCTTTGTGGGAAACCTGCTTGTACTAACAGCTCTAACAAAA---CGCAAGCAGAAGACAATAATAAACATTCTCATCGGTAACCTGGCCTTTTCTGACATCTTAGTTGTCCTATTTTGTTCTCCTTTCACGCTGACGTCTGTACTCCTTGATCGGTGGATGTTTGGCACTGTCATGTGCCACATAATGCCCTTCCTTCAGTGTACATCTGTTCTAGTTTCAACTTTAATGCTAATATCTATTGCTGCAGTCAGATACCGTATGGTAAAATATCCCCTCTCCAGCAACTTAACGGCAAAACATGGCTATTTCTTAATAGTTATCATTTGGGCCGTTGGCTGTGCCATTTGCTCCCCTCTTCCAGTTTTCCACAAAATCGTGGACCTCCACAAAACCCTCAATTTAGAGGCACTGGAGAACAGGCTCTTGTGTATTGAGTCATGGCCTTCTGACTCATACAGAATTGCCTTTACCATATCCTTACTGCTCATGCAGTACATACTGCCACTGGTGTGCTTAACTGCTAGTCACACCAGTGTCTGCAGGAGTGTAGGTTCCCGGCTGTCCAGCAAAGAAGGCAAATTCCAAGAAAACGAGATGATAAACCTCACGCTTCACCCATCC-AAGAGTGCGGGCACTGAGGCACAGCCATCCAACCACACCAGCTGGAGCTGTGCCCTGGTCCGAAAGCACCACAGAAGGTACAGCAAAAAGACATCAACGGTGATGCCAGCTATCTTAAGGCAGCAGCAGGATGCTGATTTCAGAGACCTCCCAGAAACCTCTGGCACAGAAAAAAGCCAGCTTTCTTCCTCTAGTAAATTCATCCCAGGTGTACCTATCTGTTTTGAGATGAAACCAGAGGAAAATACAGAGATCCAGGACATGATTACGGTATCCCAATCCATCATCAGAATTAAAACAAGATCCAGGCGAGTGTTTTGCAGACTGACAGTGCTAATCCTAGTTTTTGGTTTTAGCTGGATGCCTCTTCACCTTTTCCACATTGTGACGGATTTTAATGCTACTCTCATTTCTAACAGACATTTTAAATTAGTGTATTGCATATGTCATTTACTTGGTATGATGTCCTGCTGCTTGAATCCCATCCTCTATGGGTTCCTTAACAACAGCATAAAAGCTGATTTAATGTCCCTTATTCCATGTTGCCAAATACTTTAATTTT ..::..::......:.:x:x..:....-..:...:..............x..........:::..:.x..x...xx:....:.....:.:...---....:.x.x.....:.:..xx:.....:.------:.x.:......x.....:..:........x......x.......:.....x........x..:...:..:.......xx:.......:....:..:..:...:.x:...::.....x.::...---..:..x........x.:::.....x.:.....x..:..:..............:.....:.....x..:.....:..x........:...........x:.x..x....:..............xx...........:..x.....:..:.....:...:::..x...:.:..............x:.......x.....:::x.....:..:.:....:.....:.....x.x..:.::..:.....:.....x........:..::.:....:..:::.:...:.xx.x..:.x......:..:..:..:........x..:....:xx.:.....x..:..x:....x:.:::..:..x:x::...::x.:....:x:..:...:.............x.....:....................:..x..:...:....x:.x.....:..x.....x:.:..x..::.x....:x.....:..x...........:...:..:.:.x:x.::......:.......::..:.:.:x.......:........x...:.x..x.....:......-..:..x.:....-..x...::x.:.:x..:::.x:.xx:.:x.....:.:.x.x:.x:..x:...:...x:x.....:..:.....:......x..xxx...x.:..x...x:xxx...:.xx:xx..:..x:x:x.:.:....:xx..:.......x..:....x.x.x..:...:.....:.....x..:.....:.....x.....x..x..:.::..:........:.....x..:......x....x:.:..x..xx...x---:...xxx.:x..::.:.:x.....x....x:.....:x.:x.x..x..:.:.........x:.:..:..x:....x....x.x....:........x..x...........::.x..:..x..........x:.x...:.....x..:..:.....:..:..:...........x........::.x..:...........:..::.x.....x..:..x........:.....:..::.x..x............:..........x.xx...:x:..x..::xx.....:. 27M1I65M3D29M6D123M3D579M1D12M1I253M3I293M 994/1381 72.0% 1386/94230402 0.0% 18/1381 1.3% 138870099 51344456 +3615 chr4 + 190214555 163377721 163377720 163377803 83 CATGGTGGTGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATGGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--.:..:.:...........::........x.xx.x...xx:.........:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 87344524 NA +3010 chr4 + 190214555 163408928 163408927 163408987 60 TTTTTTCCATTAAATACAGTACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 71484231 71484230 71484290 71484231 71484230 71484290 60 TTTTTGCTTCTAAATGAAGTCTGGTTGTTTTTGTTGTTCTTTTTTTTTTTTTTTTTGAGA .....x.:x:.....:x...x:xx..x.....x..x..:..................... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 91924697 NA +4093 chr4 + 190214555 163425393 163425392 163425475 83 CATAGTGGTGCACACCTGTAGTTCCAGCTACTTGGGAGGCAGAGTCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:..........:--..................::....x...:.xx.x...x.:.........:.:..x:xx:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 87392196 NA +3849 chr4 + 190214555 163427281 163427280 163427418 138 AGAAAGAGGCAGAAAGTCAGAGAGAGACAGAGAGAGGAAGAGACAGAGAAAGAAAGTCAGAAAGAAGGAAGGAGAGGAAGAGAAAAAGAAGGAGTCAAAGAGAGAGAAAG-AGATAGAAGTAGTAAAGAAAAGACAGTG chr4 + 94230402 51148379 51148378 51148507 51148379 51148378 51148507 129 AGAAAGAAG----AAGCTACAGAGAGA--GAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGG----AAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTG .......:.----...::.x.......--.......:....:.....::xxx.:.:..::..x.:.:x.x....:.x:.........:....----...::...:..x..-.xx.x....:.xx..:...::..xx... 9M4D14M2D63M4D14M1I28M 89/128 69.5% 129/94230402 0.0% 11/128 8.6% 112278902 77935653 +3065 chr4 + 190214555 163434848 163434847 163434894 47 GTGTGTGTGTGTGTGTGTGTGTGTATGTATATACAGACACATATATA chr4 + 94230402 79265519 79265518 79265565 79265519 79265518 79265565 47 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCA .............::........xx..........x....:.:.::. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 84169329 NA +3215 chr4 + 190214555 163445405 163445404 163445480 76 GTCATGCACCTATGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAGATCGCTTGAGCCCAGGAGGTAGAGGCTACA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..x:.....x.:.:..:...........::........x:xx.x::.x.:.....:.....:..x.xx:....::. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 87412204 NA +3175 chr4 + 190214555 163447878 163447877 163447957 80 TTTTGTATATG-TATAAATATATTTAATATATATGTATATGTGTATATGTATATACACACAAAGATTTTTTTTTTTTTTTT chr4 + 94230402 29797128 29797127 29797203 29797128 29797127 29797203 76 TTCTGCACATGGCATACATACGT-----ATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT ..:..:.:...-:...x...::.-----..:::...:........x..:............:...xx.....x:.....:. 11M1I11M5D53M 56/75 74.7% 76/94230402 0.0% 6/75 8.0% 133650750 56563805 +3003 chr4 + 190214555 163456462 163456461 163456505 44 AAAGTGTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTGTTTGTTT chr4 + 94230402 22701645 22701644 22701688 22701645 22701644 22701688 44 AATGGATTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTT ..x.x:...:......x.......x................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 140754817 49459738 +3067 chr4 + 190214555 163465818 163465817 163465876 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 87432612 NA +3119 chr4 + 190214555 163476326 163476325 163476471 146 TATGTG-TAAAATACTTATAAACCATTCTGAGATTTTGTAAAAGGAACTCTGGAAAGATATATATATATATATATATATAAATATATAAAAGTATATATATAGTAAAATATCTGGAAAGATATACTATATATAAAAGTATATATATT chr4 + 94230402 10037965 10037964 10038105 10037965 10037964 10038105 141 TATGTGGCAATACAATCATAAACTAGTCCAGAATGCTACGCAATGAAT-----GATGATTTTAGGATAAAAA-ATATATAGCTATATATAAGTATATATATAGCTAAATAACTGTGATGGTGCTTAATCTTAAGAGGAATATATACT ......-:..x.:.x.:......:.x..::::..x:.:::x..x...:-----:.x...x.xx:x...x.x.-.......:x......x..............:x.....x...x:.x.:.::x:x..x.xx.:.:.x.......:. 6M1I41M5D19M1D74M 90/140 64.3% 141/94230402 0.0% 7/140 5.0% 153438361 36776194 +3037 chr4 + 190214555 163482097 163482096 163482164 68 TGTAGTAACAAAATAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGTGGCTCAAGCAAGATTTA chr4 + 94230402 81099186 81099185 81099253 81099186 81099185 81099253 68 TGTTTTGACAAAAGAACAGATAGAGGGAAAAAAAAAAAAAAAAAAGAAAGTTGTCCATTTATGGTTTA ...xx.:......x...x:.x.:.:::...................:....x.::..xx:.x.:.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 82382911 NA +3042 chr4 + 190214555 163494089 163494088 163494170 82 AACCCGGGAGGAAGAAAGAAAGAGGGAATGAGGGAAGGCGGGAAAGAGGGAAAGAAGAAAAGAAAAGAAAGGAAAGAGAAGA chr4 + 94230402 10544879 10544878 10544960 10544879 10544878 10544960 82 AACCCAAGAGGAGGAAAGATGACAAAAAGAATGGAGGGCTTTTCAAAGGAGAAAAAAAAAAAGACAGAAGGAAAAGATAAGA .....::.....:......x::x:::..x:.x...:...xxxxx.:...::..:..:....::.x....:.:.....x.... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 152949210 37265345 +6259 chr4 + 190214555 163507018 163507017 163507169 152 TTTCATACATTTT-AGCCCAAAGCACCAAAGGGAAAAAGTGCAGGACGGGAAAAAAAAGTCATCCATCCATATAGTAGAAAAGCAGCTCAAATTACGAGAGAGGCCCACAAACAAGAAAAAAAGGAAAAGTAAGTATCTTTTCATCATTTGTA chr4 + 94230402 24504053 24504052 24504205 24504053 24504052 24504205 153 TTTCACTTATTTTCAGCCAAAATTGCCAAAAACCAAAGGAGGGAAGCAAGAGAAAAAAGCTGTCCATCCTTACAGCAGGAAAGCTGCACAGCTCGCAAGGGAGGCGCACAAACAGGATAAGAAAGAAAAGTAAGTACTGTGTAACCGTGTGTA .....:x:.....-....x...x::.....::xx...:.x.x::::.::..:.......:::.......x..:..:..:.....x..x..:x.::.:..:.....x........:..x..:..:............::x.x.x.:.:.x.... 13M1I139M 103/152 67.8% 153/94230402 0.0% 1/152 0.7% 139002965 51211590 +5706 chr4 + 190214555 163514059 163514058 163514174 116 ACTTGTTGTTTATAGGTGAAAAACTGCAATGGTTTCAAAATCATCTTGATCCCCAAAAAAAGAGATATTCAAAGAAAGATGCTTGTGAACTAATTGAAAGGTAAACACTGGGCATA chr4 + 94230402 24509772 24509771 24509886 24509772 24509771 24509886 115 ACTTCATTCTTGCAGGAGAAAAACTGCAATGGTTCCAGAGTCACCTTGACCCCAATAAAACTGACTACACAAAGAAGGAAGCTTGTGAACTAATTGAAGAGTAAGT-CTGGGTTTA ....xx.x:..::...x.................:..:.:...:.....:...x.x....xx::x..:x.......:..x..................::....::-.....:x.. 106M1D9M 86/115 74.8% 115/94230402 0.0% 1/115 0.9% 139004287 51210268 +19973 chr4 + 190214555 163528676 163528675 163529059 384 TCACTTCTGTCATTTGTAGTGGCTGAGGGCTAGAAAGA---------TATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATCAGACTGATACAACTTCAGGGGGGCCACCCTCTGCAGATGGCAGTGAATTTGCACCTGTTTGTGGTACAGGCACTACCACAGCATCTTTGATGTCTGTGTTTACATTACATGAGAAGTTCTTCTCC---AGTTTTTTGGCAGTGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGAACATAGACTTTACACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGACACCTTTGAAATGAAA chr4 + 94230402 24528983 24528982 24529367 24528983 24528982 24529367 385 TCTCTTTCAGCATTTGTAGTG---------TAGAAAACACTATGCCTTATTCTGCAAGGAAGAAACAAT--GCTGTCTCCATCAAACTGGCATGACCTCAGATGTCATTTCTTCAGCTGCCAGCTGAGAGTTTGTACCTGTCTGTGCTACTGGCACCACCACCGCATCCTTGACATCCGAGCTCTGAGTGCACGAAGAGTTCTTCTCCTCCAGTTTTTTGGCGGTGTCTGGGCAGTTCTGAACAAAGATCACTCTGTTGTAGGCTTTCAGCCTGCGCCACAGCTGAACATAAACCTTACACTGCACGTACATGAAGACGAGGCCTCCTGTGAATCCAATGGCCACCACCACGAGTTTTGTCCAAAACGGCCATTCGAGGACACCTTGGAAATAAAA ..x...:::x...........---------......:x---------......x.::x........xx:--:.x.x:.......:....::.::..:....:x.xxx:x:.:..x..x.x::..x.x..:....:......:....x...x.....:.....x.....:....::..:.x.:.:xx.x.:..:..::...........---...........:...........:..:..x...........x.x.........:................:.........:..:........:..............:..:...........x........:.....x..x..............:........:..........x.....:... 21M9D8M9I22M2D137M3I185M 291/373 78.0% 385/94230402 0.0% 23/373 6.2% 138999693 51214862 +11653 chr4 + 190214555 163545574 163545573 163545756 183 AAGAAGAAAGATGTGCTCTTACCATTGTCATTGCCTTGCTTGATTTCCTCCGCTGTCCGGTCTATCAATACATACAAAGACCAAACCACACAGGTGATCGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTGCAATCAGAAA chr4 + 94230402 24533991 24533990 24534169 24533991 24533990 24534169 179 AAGATGAAAGA----CACTTACCATTATCATTGCCTTGTTTAATTTCCTCTGCGGTTCTATCAATTAAGACATACAATGACCAGACAACACAGGTAATTGCAATTACATGGAATGTGACTGAACAAACTATTTTCCTCCTCTCACTTGTCGTCATCTGTAGTTTTTCCCACTACaattaaaaa ....x......----.x.........:...........:..:........:..x..:.x:..x..:..x........x.....:..x........:..:..:.....:...........x..:..:.x............:........x..............:.......:....:.:... 11M4D168M 149/179 83.2% 179/94230402 0.0% 4/179 2.2% 139011583 51202972 +3301 chr4 + 190214555 163552893 163552892 163552962 70 CATGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x:..--......:...........::........x.xx.x...xx:.........:.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 87519696 NA +3422 chr4 + 190214555 163553074 163553073 163553159 86 AAATTCTAGCTCTGCCACTAAGTACTGTGTGACCTTGGGTGAGTTATTTTAATTCTCTGTGCCTCCATTTCTTTATCTGTAAAATG chr4 + 94230402 79037093 79037092 79037173 79037093 79037092 79037173 81 AAATTTTATTTCTGACAA-----GCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATG .....:..x:....x..x-----:....:.......:..x:..........x..x....x.::..x...:..::.xx.:....... 18M5D63M 59/81 72.8% 81/94230402 0.0% 5/81 6.2% 84515981 NA +3061 chr4 + 190214555 163562157 163562156 163562239 83 CGTGGTGGCCCATGCTTGTAATCCCAGCTACTCCAGAGGCTGGGGCAGGAGAATCGCTGGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:x..:.--....:.:.........:x.:......:.x.xx.x...x.:..x........:..x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 87528960 NA +15494 chr4 + 190214555 163565141 163565140 163565929 789 CAGCTTCAAAAAATATAACTGCCTGTAGTAAACAG--CCCTGAATCTCCTGCGAAT-GCAGAGGCAGGCCATAAATGCTATGGGGTTCTTTTAACTTTAAT-GCTTTAATATACACATCC--CTCATGC-CAAATTCTTTCACTGTAATGACATGATATCTTATAAAAAAGTAACAGGTTTGTGC--------ATACAGGAGACATATTTGACCTTGTGTGTTTTAAAAGATGATTGTGACAAGGTTTGCAACAGTG----GAAATGGTTTTCTAGACAGGAGAAATCAGTGAGGTGGGTTGCCTTGACAACGTGGGTTAGTTGCATCAAGAAATCCATGGCAATACAGGACCTTCTTCTGTTATGTCAAG-ATTGCAAACAATCTACCAAATTAGGTTAAAAGAAAACGAATCCCACAGCAAGGCAGTGTTATCTGACCTATGAAATATTAGTTCTCACTTTTTATCATGAACCTTGTTAGAAAA--GATGAAAAAATCTAGGTGG---GCAAGACAGACAGGAGAGCAGGAGTAAAGTGGGTTTCACTCAAAAGTCTGCTCTCC-------TCTCCTCTAAAGCAC-TTCACCCCCAGAAGGATTCCAGGAGTTCTTGCATAT-TCTCTGAAAGTCGATCCTGCTAAGAAAAATCTTACCCCGATTCTGTTGATTTCCCCAGCAGTCTCCACAAAGCTTCTCTCTGGGGATTATCACTGCTC-------CTATTGCATATTCTTAAATAATGAGCATAAATAAGGATTACCACAACAAAGCTAGTTATTAGTTAAATAGAAAACAAAACCTGTTAACATA-TGTGCCCT chr4 + 94230402 24544416 24544415 24545197 24544416 24544415 24545197 782 CAAATTTTACACATACAGTTGTCTGAACAAAGTAGTTCCTTGCATCCTCAAGGCATCACAGTGGAA---TACAAATGCTACAGAATTATTTTAACTTTAAAAGCTTTAATATGCACTTTTTGCCCGAGCACAGAGTTATTCACTACAATGACGTGATAGCCAATAAGAAAGTAATAGCTTTGTGCCTTTGTGCATAGTGGTGAAGTATCTGACCCTGCATATTACAAGAAATTATT----TGAGGCT---AGCGGTGTTTTGAGATGGTTTACTCTGAGAAAGAAAACACTGAAGCAGGTTGCCTTGACGACACTGTGCAGCTACACCAGAAATCAAAAGGAAATGTAGGA---TCTTCTGCTATGTTAATCATGGCAAAGTATTCACCAAATTGAGTTAAAAGCAAACTAATCCCACGGCAAGTCAATGCTACCTGACCTATGCAATACTAGCTATTACTTCTTATCATAAGCATTATTAGAAAACTGATGACCAAG-CCAGATGGTACACACTTCAGAGCTGAGGGCAGTAAGAAG-----------TAAACAACTTGCTATACAGTAATGACTGCTCCAAGTTTCATTTGTTCCTAGGAGACCGCTGG------TCACGTACGGCTCTGAGGGTCTGCTCTGGGGGCAGGAGT-------GGTTTCTAATGGTGACCAAGCTTGATTTCACAACGATG-TCCCTGCAGGCTACTTCTCTTCCAGCAGTCAGCAGCATATTCCTAACTAAAAAGCGTAAATAGAAACTCTC---------CAAGTTTTTAACCGAAAATAAATCAATTCCC-TTAACATATTTTGCCCT ..:x..:x.x.x...:.::..:...x.xx..::..--..:..x...::.x:x.x..-:...x..x.---:.:........::.::..x............x-..........:...x.::--.:.:x..-..:.x.:x......::......:.....x.:x....:.......:..x.......--------...xx..x..x:...:.....:..::.:..x:..:.:..x...----::...:.---.:.:...----..:.......x..xx:x:::.....x..x...:.::............:..::x.xx:..:.:..:..::..x:xx.x..x...::....---.......:.....:..x-..x.....xx..::........::........x....x........:.....x..:..:..:..........x....:...:.x.:....:.......:.:.x..:........--.....xx..:-.:..:...---:..xxx....xxx...:....x.:x..:-----------.x..x.:::....x.x.-------x..x...:..:x:x.-..::::..:..:..:x:x.::.------.::.:..:-x......::...x:::...xx::x.::.:.-------x.x....:x..:.xx..xx:x:x.x:.:.....x.x.x-..:...x:.::..::x..x:..-------.x::x........:...x...x:...:......:::.:.x:.---------.x....x...::::..x.x...x...xx..:-........-.x...... 35M2I19M1I9M3D32M1I18M2I7M1I55M8I43M4D7M3D7M4I90M3D17M1I114M2I10M1D8M3I28M11D17M7I15M1I22M6D8M1I30M7D38M1D22M7I42M9D31M1D8M1I8M 486/740 65.7% 782/94230402 0.0% 91/740 12.3% 139020725 51193830 +14972 chr4 + 190214555 163585725 163585724 163585975 251 AACCAATTCCTATGGATACTGTACCTTCCGGAGGGGTTTGAGCTTGGTCTCCATTATGAAGTCATACTTGCAGAGCTCACAGCAGCGTGTATCTGAGCTCTTTATCCACTGGTGGAGGCAGGACTGGTGGACAAAGCGCAGTGTCCCAGTGCAGCGACAGGGTGTGATGAGGGGGCTCTCTTCATCCCCTTCGCAGTGACAGATTCTG--CAGAAAGACA-CAGCAGCCAGT-ATGAGATCTCCCAGAGAACATT chr4 + 94230402 24550710 24550709 24550963 24550710 24550709 24550963 254 AATTAATTTCAAAAG-CACCATACCTTCCGAAGAGGTTTGAGCTTGGTCTCCATTATAAAGTCGTACTTGCAGAGTTCACAGCAGCGTGTGTCTGAGCTCTTAATCCACTGGTGCAGGCAGGCCTGATGTACAAAGCGCAAGGTCCCTGTGCAGCGACACGGTGTGATGAGGGGACTTTCATCATCTCCCTCACAGTGACAGATCCTGACAAGGAAGACAGCAAGAGCTAGTGAGGAAACTTTCCAATCAGCACT ..::....:.x.x:.-:..::.........:..:.......................:.....:...........:..............:...........x...........x.......x...:..x..........:x.....x...........x..............:..:..x.....:..:..:...........:...--x..:......-..:x...:...-.x..:.::.:...:xx.:..:. 15M1D192M2I10M1I11M1I22M 204/250 81.6% 254/94230402 0.0% 5/250 2.0% 139035015 51179540 +6487 chr4 + 190214555 163589349 163589348 163589665 317 CATCATTTTCTCATAAAATTAAGGTTATTTCCCATAGGGAAAATCAAAAACTTGGTTCATTTTTCATTCCCATTTCACATGATTTATTTTTATATATTTTTAGCATTTTGAAATTTTTCCAAATTATCTGGCTCAAGTTGGACCTCAAGA--GTCTTTTCAAATCATGTTGAGATTGTTCTAAATAAATTTAAAAGCTAAATATCAACTTCAAATATCTACTAGAAATAAAAAATAATGTGATCGTGCCATTAAAGAAAGAATTAAATAATTCCTAAATTGATATACTT-CACACAAATCACAATCGCTGAATTATAAAT chr4 + 94230402 24552801 24552800 24553113 24552801 24552800 24553113 313 CATCATTTTCTTTTTAAATTAAAGCTATTTCCCAAAGGAAAGCTAGTATTCTTTGTTCA-TTTAAATTCAAGCTATACATAATTTATTT---TACAGGCTCAGCA-TTTAAACCATTGAGAAATTATACAACTGAACTAGGTACCCAAGAGTGTTTTTTGTACTATTGCCAGAATTGTTTTAAATTATTGTAAGCACTAAAATACAATCCTAAAACTCCACTGGGATCTTCAGCTAAAGTGACATTGCAAATTTGAAATAAATAAAAGTATTCTTCAGTAGAAATAGTTATATAAAAATCAGCAT--ATGAATTATACAT ...........:x.x.......:.:.........x...:..:x.x:x.xx...x.....-...xx....xx::.x:....:........---..:.xx:.:....-...:..x:x..xxx.......x:::..x..x.x..xx.:.....--..:....xx.x.xx..:::::......:.....x.x.x...:x:.....xxx...::::...xx..:...:.:.x:xxx.:x...x....:xx...x.x.xx::..x:...x...xx....:.x.:.x..x...x..-:.:.x......xx..--x.........x.. 59M1D29M3D13M1D44M2I137M1I15M2D13M 199/310 64.2% 313/94230402 0.0% 10/310 3.2% 139036548 51178007 +40804 chr4 + 190214555 163612242 163612241 163613684 1443 ACATCAAGCCTTTCTCTACAGTGACTGACCTGCATACTTCTAAATTATCAGACCCATCGTCATAGGTGGCAGGAGGCTTCTGAACAGGGTTATTCACCTGGAGCCCTGCATCATTCATGTCCTTGCTGCCTTCTGGAACTCCCAGTATTTCAGTGCTGGAATCTGTTTCTGAAAATGTCTTCTTCATTATTTCATTTTTCCTAAGACTT-----TGCAAGAGCTGAGGATCTCTGTGGTGATATCTGCCTTTGCTCTTCTCATGATTCCTTGAGGATCTCTTAATTTC---AGAGGACCCTTGAGTCAGAGAAGGGTTGCATTCTTGGTACCTTGTATGTTTTCCTCTGTGGAGATTTAAAGAGCAACTCTCACATTCAATCAGCTCTTGTTGCTCTTTACCTTTGGATCCCAGATCAACGAGCTCAATTCCGTTAGGAGTGGAAGACCCAGCTAAGTTTTCACACGGCTTATTATTATTTCTCCTCCTTCTTCTTGACAGTCTGAATTTAACCTGGGCTCTTCTTTTTGCCTGAATCCAATGACTCTCATCTGTGGAAGATGAATCTGAAGAATCTGTGTAAAGCTCCCTCCACCTGGGGCTTGAGATTTGAAGGTGAAAGTCATTTTTTCTCCCTCTTATTTGTTCTTCTGCAGCATGCTCATATCTCTCAGAGGCTTTTCTCCTCCTCCTAGGTCTTTGTATTACTGATTTCTTACCAGACTCCTTCCTAGCAGGGCTCAGCACCATGACAGGGGTGCAATACTCAAATGACTCTTCTGACATGTCATGCAAGATGGCAGATCTAGACAGAGCAGCAGGCAAAGGATGGGAAATGGGAATGGAGAGGAAAGCCATGGAAAAACAGAGAGAGAGA-----------ATGATGAAAATGACAGCATGGACCAGAAGTAGATAAATAAAGATCAACTGAAGAAAATGAACTAAATGAAAAAAAATAGCCAG----TATAAATTTTCTATGGACCATGTAAAGCAGAAGCAAGAGACACACATTCT----------CAGAACAAACAACAAGAATACGAATATTGATCCAAAGAATATAGATTAAGATAATTTGTTCAGCACTTACCTGCAGATGTCCTGAGTGGATGGACAGACAGACAACCTTGACTGGCTCCTGGGAGCTGTCCCTGTTGTTGGGCTGCTTGCCTGGAGAAACAAGTTAGATAATTTGGCATCTTGGTTAAGGTAATACATGGTTGATATCTTGCTTTTTTTCCACATATTTAAAAAATTACAACAAACGTGGCTGCTGGTCATGTTGCT--------TATAATGCAGAACA-----------GAGAATATAGGAAGTTTGAGGTTGGTTTTGCAAAAGTAAAACTTATTTGAGGAACCTGGAACAGCTGAGATGCTGC-GCTAT--TTTGCT----GTTACTTCAT-TTAC-GAGAGAGGAAGATGATTCC-----ACAAGTTTCTA-------TTCTATTTACTGTAATCATTTGAGTGGAA chr4 + 94230402 24561731 24561730 24563186 24561731 24561730 24563186 1456 ACATAAAATCTTTCTTATCAAGGACTAACCTGCATACTTCTAAATCATCAGACCAGTCATCATACAACACTGGAGGCTTCTGAGCAGTGTCAGTCACTGTGGGCCCTGCCCCAA-AAGGTGCT--CCATCGTCTGGGGCAGCTAGAGCATCACTGCCAGAGCCTGCCTCCGCAAAGCAGTCCTTGATGTCTTTATTGTGTCCGAGGCACGAAGATGCAGG--CTGCTCATCTCTGCAATAACTTTTCTCTTTGCTTTTTCGACATTTTTGTGAGGAATTCCTCGCTTCCTGAGATGATGCT---------GAAGATTGTGATTCCTTAAACCTTGGAATCCTTCTTCTGCGATGATTTAAAGTAGGATTCTCAGGGTCAGATATGTCCTGCTTCTTTTTCCCCGTTGTCTCCAGAGTGACAAGTTCAACAGCGTTATTGTTTGAGGACCCATCCTGGTTACTGCATGATCCCTTATT---CCTTCTCCCTCTCCTGGACAATCTGGCTTTTTCTCTTGCTCTCCTCCTAGCCTGAGCCCACTGACTCTCATCTGAGGATGATGA------------TGAATCAGATGCATTCCAGCTGGATTTTGCAACCTCGGGATGTAATCTGCAGTCTTTCCCCTTTCCTTGCTTTTCTGCA---TGCTCACCATTGTCTCCAGTCTCTCTTTTCCGCCTAAACCTTCGTTTCACTTGTTTCTTACCAGACTCCCTATTAGAAGGGGTCAGCACCATGACAGGGGTTGCATGTTCAAGCTCATCTTCTGACAAATCATGCAAAGTAGTAGATCTAGACAAAGCAGTAAGCAAAGGA-AAGAGATGGAAATGGTATGGGTGG--GTGGAGAGAGAGAGAGAGAAATCAGAAAAAAAAGGATGAAAAGGAGAACATGAATTATGATATGAGACTGAAAAGCCAA--AACAGAAACAAAACAGATCAAAAGAAAAAACTAAAGTCTATGAAATT---ATGAATAGCGTTATGCAGAAGCAAGAACTACATATTCTACGTGTTACTTAATAAAGGCAATAACAA-ACAAATATCAATCTGAT-----TAGAT----ACATATTTCTCAGCACATACCTACAAATGTCCTGAGTGGAAGGGCAGACAGACAATCGTGACTGACTCCTGGGAGCCGTTCCTGTTGTAGGGCTGCTTGCCTGTTGAAATAAGTTAGACAGTTTGGAATCTTTGTCCATGAAATACATTGCAGATATTTTACTGCTTTGCCACATGATTACAAAATTAAAGTAActgctgctgctgctgctgctgctgTTCATAGCGTACTGCTGAACAAATGCAAGTTCAAAAATACAGGAAGCCTGA----------CCAAAAGCAAAACCTATTTGTGGAACTAAATATGACTGAAGTGTTTCAGCTGTCATTTGTTCATGACTACTTCTTGTCACTGTTTGAGGAAGCAGCTTTCAACATACGAGATTTCAATTTGGTTTCTATCTACCGTAAATGTCTGATGGGAA ....x..::......:xx..:x....:..................:........x:..:.....x:xx:.x............:...x..:.x....:xx.:.......x:..x-x.x..x..--.:::.x.....::.xx.:..x::x...x...::..::...::..:.x...xxxx.:...x..xx:..:...x.x:.::..:.x:-----....:.--...xxx.......:::.:.:x.:.x:.......:..::x.::x..::x......x:..:.x::...---...x..:x..---------....:x.xxx....:.x:x......x.xx::...:....:.:x.........x:x:.:.....x:x...:x:.xx..:..:.x..:...x..:x.x.x::.....x::..:..:....:xx.....xx:x.x..:......x.:x:...x:::..:.::::x.....---:..:....:...:..x....:....:x...xx.::xx.....:..::.x......::...x.............x...x.....------------..x:.x.:::x.x:....x....:x:...x:.::.x::.:..x..x::::xx.:.:....::..x:...:.:.......---......:xx:.x..xxx:.::.:...::...x....:::...:..x.:...x:................:.x:...x....x...................xxx..::....::xxx..........x:........::.:.:...........:.....:.:........-::..:....:.....x:x..:x:.--:....:.:.x.........:.-----------.x........x..x.:....:.::.x:.xxx..x.xxx...:::...--:.x::...::..x:.:..x....:...x.:.:.:----...:..x..---...:.:x::..x.x............:x:...:.....----------:.:x.x.::...:..x..-..:.....::...::.x-----.....----.:.xx..x:.......x.....:..:..............x..:...........:.x......:...........:..:........x..............xx....:........:.:.....x.....x..:x.x.x.......x.:x.....:..:..x:...x......:x...x.......x.::..x:.:x.......x.xx..:....--------::..x...x.....-----------:.:....:......::...----------x......:.....:......x.....:x::x.:::....::..:.x.-...:.--....:.----::......x.-.:..-.xxx.......xx.x..:.-----..:..x..::.-------......:...:....x::.:...xx.... 114M1D8M2D84M5I6M2D66M3I10M9D167M3D84M12D79M3D171M1D24M2D21M11I47M2D34M4I9M3D38M10I18M1D17M5D5M4D217M8I14M11I19M10D47M1I5M2I6M4I10M1I4M1I19M5I11M7I29M 926/1383 67.0% 1456/94230402 0.0% 133/1383 9.6% 139050511 51164044 +3223 chr4 + 190214555 163620631 163620630 163620689 59 AGAGAGAGAGAGAGAGACACGCACACACACACACACATTTATAGAATATATTTTTAGGA chr4 + 94230402 67195533 67195532 67195591 67195533 67195532 67195591 59 AGGAAAAGAAAGGTATATACACACACACACACACATATATATATAATAAATTCTCAGGA ..::.:...:..:x.x.:..:..............:..x....x....x...:.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 96425098 93789457 +9756 chr4 + 190214555 163626035 163626034 163626396 362 CTGGATGAGCAGAATAATATGTTCTTTGAAATGAAGCATTCTTTGTAATGGATGTTTATTTCAGATGATTACATTGTACAGTGCATTCAAATGGGAAAAACAAACAGGAGGCCAGCTGCACTAATTTTATCA-AAGTTATTTATATCAGCAGTATAATTAAAGGCAGTAATTTCAAATTAGGTTTTCTGAAAATCCATTTATAGACAACACAAGGCAACTTGTCTTAGTGGCATCTAGGCCATGATTGTGCTCTAGGGGCAATGTTAACTATTGCCAATTGGCCTTGGCATTTTGAAAAT-TAATTACGGTTTCAAAAGATTCTAAAGTGGTTGCTTCCTGGTGCCCTGACCAGTTTAGATCCA chr4 + 94230402 24565954 24565953 24566296 24565954 24565953 24566296 343 CTTGGCAGGCTGAACAATGAATTCTTTTAAAAATAGTATTCCTTG-AGCTGATGTCTATTTCAGACAGCAATACTGTGCAGCTCATCAGAATGGCAAAACTAAACTAGTA-----CTGTACTAATTTTATCATAAGCAAATTATACCAGCAGCATAATTAAGGGTGATAATTCAAAATAAAGTTGTCTGACAATCC---TATAAGCAAGGCATCTCAGC---TCTCCATGACATCAACACAAGGAAGATACCT--GGGTTAACACCAACTCCAGCTGATTGGGTTTGGCAGTTCAAAAATGTTATTA--GT----AGAGATTCCCAA-TCACCACCTTCTGCTGTCCTGGCCAGTTGAGATGCA ..x.::::..x...:...:x:......x...x:x..:....:...-.::x.....:.........::::x.:.:...:...:x...:x:.....x....x:....x:.x:-----...:.............-...:x.x.....:......:........:..:::.....:x....x.:...x.....x.....---....::...x:..xxx..:.---...:x:..:....x.x:.x.x..xx:.:.::--...x:..::::....x:x..::.....x:......x..::.....-.x....--..----.:......:x..-.x::::.:.:...x..:....:......x....x.. 45M1D64M5D17M1I63M3D20M3D31M2D45M1I6M2D2M4D12M1D36M 230/341 67.4% 343/94230402 0.0% 23/341 6.7% 139060081 51154474 +3040 chr4 + 190214555 163642954 163642953 163643016 63 TATACATATGTGTATGTGTGTGTGTATATATACACACACATATATATACACATATATGTATGT chr4 + 94230402 79265520 79265519 79265582 79265520 79265519 79265582 63 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .:.:::.:....:.........xx.:........:....:.:.::.:..:..x.:..:.x... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 84377434 NA +3146 chr4 + 190214555 163672119 163672118 163672185 67 TGTGATCTTGAGCATGTATTTTAACCTCTCAGTGCCATAATTACTTTATCTATAAAATTGGGATAAT chr4 + 94230402 27044683 27044682 27044749 27044683 27044682 27044749 67 TGTGACTTCAAGAATGTTCTGTAACTTCTCAGTAGCACAATTTCTCTATCTGTGAAATCAGGTAAAT .....::.::..x....x:.x....:.......:x..:....x..:.....:.:....::..xx... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 136627436 53587119 +3102 chr4 + 190214555 163676632 163676631 163676694 63 TGCAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAGGATGGCTTGAGCCCAGGAATTTGAGGTT chr4 + 94230402 76033211 76033210 76033273 76033211 76033210 76033273 63 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ..:...:...........::........x.:x.x.:.xx:.....:.....:.::..x:..:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 87643421 NA +7715 chr4 + 190214555 163678301 163678300 163678510 210 TGGTATACATTATGATTAAATAACACAGAATCTGTTCTGCCTCTTGCATAGAATTAATTTTGGTATAGCTTCCATTTCATTAGAGGAGCACTTTAAAACAGGTCAAGTGTAACCAAGACTAAATTGAAAATGCATTAT--------TCTTTT-TTGGTAGGCCCTCTAAGCTGATACATATTTAATGTAATTTTATAAGGAAGTTCAAATGTCAGGCAG chr4 + 94230402 24569159 24569158 24569373 24569159 24569158 24569373 215 TGGTAAGAATTATGACTTAAGAAAACAGAATCTGTACGAAATATTACATTGTTTTTCTGCAAGTAT----TCTTTTTCACTAAAGCACTAGTTTAAAACAGGTCAACCGTATCCCAGAATAAACTAAACATGTATTATCTGTATTATCTTCTGCTGGTTGGCTCCTGAAACTGAGACACACTTGATGCAATTTTATTTAAAAGTTCAAATGTCAAGCAG .....x:x.......:.x..x..x...........x.x:xx.x..:...x.xx..xx.x:x:....----..:x.....:..:..x.x:.x...............x:...x..x...x....:.:..x...:.....--------....:.-:....x...:.::x..:....x...:.:..:...:........xx::..............:.... 66M4D68M8I6M1I66M 148/206 71.8% 215/94230402 0.0% 13/206 6.3% 139109142 51105413 +5742 chr4 + 190214555 163700802 163700801 163700925 124 ACTTCACCTACTTTTGAAATGTTACTTGATCGACTTGCAGATCGCCCTGGGGATTTTTCATTCTGAAAAATAAAATGGGAAACATTAATTAAAAGAAGGTATGGTAC-----TTTCACCATACTGTACC chr4 + 94230402 24574289 24574288 24574415 24574289 24574288 24574415 127 ATTTCACATACCTTTGAAATATTACTTGATCGACTTGTGGAACGCCCTGGGGATTTGTCATTCTGGAAAACATAATAAGGAGA--TGAGAAAAAAAAATTATGGCATGCAAATTCTACCTTCTTCTACC .:.....x...:........:................::..x..............x........:....:.x...::.:.:x--.:.xx....:..:x.....:.:-----..::...x.x:.x.... 83M2D22M5I17M 92/122 75.4% 127/94230402 0.0% 7/122 5.7% 139126513 51088042 +3066 chr4 + 190214555 163725348 163725347 163725420 73 TGCACCTGTAATCCCAGCTACTCAGGAGGCTAAGGTGGGAGGATCACTTGAGCCCAGGGAGTGGAGGCTGAAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........::::.....:..x:xx.x.:.x.......:.....:::x.xx:.....x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 87692143 NA +3813 chr4 + 190214555 163733146 163733145 163733234 89 CATTTCTCTCTCTCTCTCTCTCTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATAT---------ACACGTGTATATAT chr4 + 94230402 60831526 60831525 60831623 60831526 60831525 60831623 98 caTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x...x.....x.........x.x.....:.....:.:....:.:.:.:::.:.:x.x..x...:..x.....---------:..:....:..... 75M9I14M 65/89 73.0% 98/94230402 0.0% 9/89 10.1% 102901620 87312935 +3295 chr4 + 190214555 163733150 163733149 163733232 83 TCTCTCTCTCTCTCTCTCTGTATGTGTGTATATATATATATATATATATATATATATATATATATA-------TATATACACGTGTATAT chr4 + 94230402 60831534 60831533 60831623 60831534 60831533 60831623 90 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT .....x...............:.:.:.:.:.:....:.:.:.:::.:.:x.x..x...:..x....-------.::::.:::........ 66M7I17M 56/83 67.5% 90/94230402 0.0% 7/83 8.4% 102901616 87312939 +3195 chr4 + 190214555 163733224 163733223 163733321 98 CGTGTATATATATATATACACGTGTATATATATATACACACACACACACACACAGACACATACACACACACACGCACACATATTATATATATATGAAA chr4 + 94230402 23247721 23247720 23247810 23247721 23247720 23247810 90 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGA---AAAAAGTTACATGAATAA-----ATATATATATGAAA .:...:.:...::.:.:...:x.:.:x.:....:........:...........::x.---.x.x.xx:...:.x.:.x-----.............. 58M3D18M5D14M 63/90 70.0% 90/94230402 0.0% 8/90 8.9% 140485503 49729052 +3309 chr4 + 190214555 163781227 163781226 163781293 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGAAGGCGGAGGTTGTAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........::....x:xx:..:..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 87748016 NA +3304 chr4 + 190214555 163811404 163811403 163811472 69 GTGCACCTATAGTCCCAGCTACTTGGCAGGCTGAGAAGGGAGGATTGCTTGAACCCAGGAGTCCAAGGC chr4 + 94230402 76033204 76033203 76033272 76033204 76033203 76033272 69 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ......x.:....:...........:x........xxxx.x.:.x::...........:..:::x:... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 87778200 NA +3023 chr4 + 190214555 163811488 163811487 163811542 55 AAAGAAAAGAAAGGAAAGAGAGAGAGAGAAGGAAGGAAGGAAAGAAAAAGACCAA chr4 + 94230402 66158979 66158978 66159033 66158979 66158978 66159033 55 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAGGCTGA ....:...:....:...............:.:..x..:.x.:.:.x.:..:.::. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 97652509 92562046 +3201 chr4 + 190214555 163817271 163817270 163817322 52 ATGTATGTGTTTGTGTGTATACATATACATACATACATATATATGTACATAT chr4 + 94230402 68837093 68837092 68837144 68837093 68837092 68837144 52 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACAT .:..:..:..x.......:....:.:.x...........:.:...:...:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 94980178 NA +3183 chr4 + 190214555 163817272 163817271 163817356 85 TGTATGTGTTTGTGTGTATACATATACATACATACATATATATGTACATATACACATATACATATATATGTACATATACACATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATA----------CATGTTTATGCACACATACACACAT ...:.x...x.......:.:::...xx..::.x:....:.......x...----------...:.x....:...:.......:.. 50M10D25M 55/75 73.3% 75/94230402 0.0% 10/75 13.3% 77982731 NA +3003 chr4 + 190214555 163817323 163817322 163817409 87 ACACATATACATATATATGTACATATACACATATACATACATACATATACATACATATATACACATGCATATATACACATATACATA chr4 + 94230402 22600182 22600181 22600268 22600182 22600181 22600268 87 ACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...x.x..x..x:x.x.:::......x.....::.x.:....:....:.x.x.:..:....:x::..::.:....::...::..:.. 87M 54/87 62.1% 87/94230402 0.0% 0/87 0.0% 141217141 48997414 +3067 chr4 + 190214555 163817359 163817358 163817415 57 ATACATACATATACATACATATATACACATGCATATATACACATATACATATATATG chr4 + 94230402 42936212 42936211 42936268 42936212 42936211 42936268 57 ATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATG ..:...::..........x..:.....:.....x:.:.:....:.x.:.:::..... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 120881147 69333408 +3042 chr4 + 190214555 163847545 163847544 163847606 62 TTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 + 94230402 63206537 63206536 63206598 63206537 63206536 63206598 62 TTAGCTTTGGTTTTTTTTGTTGATTTTTTTTTTCCTTCTCTCCTTGTTTTCTTTCAGGTGGA ..x.....xx........x..xx..........::..:.:.::..x....:...x..:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 100641008 89573547 +12907 chr4 + 190214555 163854002 163854001 163854287 286 AAAGTAACTTTCCACTCACCAATGTGGAGGTTTGTGAGGCGTCAGCCAAATCCCCTGAGATCTCGGGTGTTCGCGTGTTGTTTGGAATTCTGTGAGGGTTACGGGCTATCGCTTCACACCAGCCCAGCATTTTCTCCTTCCTCTTATCCCTTTTCAATTTCTGAAATTCTGAAAATAATTTACATTCCCTGAAACA-GGTCACTT---ATTTTAGCTGTGTTT-----TGGAAAATACATATAATCAAAATTAAA----TCAACAATATAACAAAACA--CTAATTGAGACTTTTTTAAAA chr4 + 94230402 24610465 24610464 24610753 24610465 24610464 24610753 289 AACGCAAGTTTTCACTCACCAGAGTAGAGTTATGCGAAGCATCA---------CCTGAGACCTCGGGTGTTCTTGTGCTGTTTGGAAGTCTGTGAGGGTTACGAGCTATCGCTTGGCACCAGCCCAACATTTTCTCCTTCCACTTATCCCTTCTCAATTTCTGAAATTCTGAAAATAATTTAGAGTGCCTGAAACATTGACACTTTGAATTTATTATGTGCTTGTCTCTG---AATGCATGCCTTTAAAAAAACAGCTTTTAAAATTGTATCTAAACAAGCTAATAGACATATTTTTAGAA ..x.:..x...:.........:x..:...x.x..:..:..:...---------.......:...........x:...:.........x...............:..........x:..........:..............x..........:.............................x.x.x.........-x.x.....---....xxxx....:..-----..---...:...::xx.:....xx.x.----.:..x.x.:..x.x.....--.....x..x.:x......:.. 44M9D143M1I8M3I15M5I2M3D22M4I19M2I21M 221/274 80.7% 289/94230402 0.0% 27/274 9.9% 139243537 50971018 +3086 chr4 + 190214555 163873039 163873038 163873082 44 GTCTCAAAAAAAAAACAAACAAACAAACAAAAAAAAACAAACAA chr4 + 94230402 22620555 22620554 22620598 22620555 22620554 22620598 44 GTCTAAAGGAAAAAACAAACAAACAAACAAGAAACAACAAAAAA ....x..::.....................:...x......x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 141252484 48962071 +3199 chr4 + 190214555 163873040 163873039 163873173 134 TCTCAAAAAAAAAACAAACAAACAAACAAAAAAAAACAAACAAACAAACAAAAAAAATGATGAAGTCATAGTTTTGTTACAAACTGGAAAAATAATCAATTTCT------TAAGGTTTTTCTTCAGCTAATGAACAATCT chr4 + 94230402 77919155 77919154 77919287 77919155 77919154 77919287 133 TCTACAGCAAAAAACAAACAAACAAACAAAAAAAACCCAACAAATTGTGCAGAAAGATAATAAGCaattaaatttattttaaatta-------CATCAATGTTTGACAAATAAGTTATGTGGTTAGCTACTCTACTATCT ...xx.:x...........................x.x......:x:xxx.:...:..:..:.:xxxx..:x...:..x:...:.:-------x......x.:.------....x.x.x.xx.:.....x.xx..x.... 86M7D11M6I30M 86/127 67.7% 133/94230402 0.0% 13/127 10.2% 85953885 NA +3047 chr4 + 190214555 163873055 163873054 163873114 60 AAACAAACAAACAAAAAAAAACAAACAAACAAACAAAAAAAATGATGAAGTC--ATAGTTTT chr4 + 94230402 34292958 34292957 34293018 34292958 34292957 34293018 61 AAACAAA-AAACAAAAACAAACAAACAAAAACACCAGAAAAATAATGAAGGCTAACAGTCTT .......-.........x...........x.x..x.:......:......x.--.:...:.. 7M1D44M2I8M 50/59 84.7% 61/94230402 0.0% 3/59 5.1% 129580097 60634458 +3000 chr4 + 190214555 163883217 163883216 163883257 41 AGATATATATATATGTGTATATGTGTGTGTATATATATATA chr4 + 94230402 24523913 24523912 24523953 24523913 24523912 24523953 41 AGGCATATATATATGTTTACTTGTGTGTGTATATATATATA ..::............x..:x.................... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 139359304 50855251 +3162 chr4 + 190214555 163894969 163894968 163895026 58 ATGTGATGCACACATATACATATATATGCATGTGATACACATACACACACATATGCAT chr4 + 94230402 47265530 47265529 47265586 47265530 47265529 47265586 57 ATATTACACACACATATATATATATATATATGTCCTACACACACACACA-ATTTGCAT ..:.x.::..........:........::....xx......:.......-..x..... 49M1D8M 46/57 80.7% 57/94230402 0.0% 1/57 1.8% 116629439 73585116 +3952 chr4 + 190214555 163929927 163929926 163930026 100 AATATATTATATATTTATATTATATATATTATATATAATATATATAATATATATAATATATATATAATATATTATATATAAATATATTATATATACTATA chr4 + 94230402 26320248 26320247 26320344 26320248 26320247 26320344 97 AATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA---GTATTGTATATGTAATA ...x...:x:.:..x.....xx..:............x......:.......x..x...:...x.....xxx...x.x..---:....:.....::x... 80M3D17M 72/97 74.2% 97/94230402 0.0% 3/97 3.1% 137609679 52604876 +3040 chr4 + 190214555 163959279 163959278 163959383 105 AAAAAAGAGCCCAAATAGCCAAAGCAATCCTAAGCAAAACAACAACAACAACAAA-------------------AAAAAAAAACAACAAAAAAACAAAAAACACAAAACAAACAAAAAAAAAGC chr4 + 94230402 71419141 71419140 71419258 71419141 71419140 71419258 118 AAAAAAAGGCACAAA--ACAACAGCACTTCT---TAAAACTGCCAAAA-AACAAACATCCCCCCCCCCCCCCCCAAAAAAAAACAAAAAACAAACCAAACACAAACAGCAGGCAAAAAAAAAGC ......::..x....--:.x.x....x.:..---:.....x:.x.x..-......-------------------............x...x....x...x...x.x.:..::............ 15M2D14M3D14M1D6M19I50M 77/99 77.8% 118/94230402 0.0% 25/99 25.3% 92540138 NA +3167 chr4 + 190214555 163959279 163959278 163959353 75 AAAAAAGAGCCCAAATAGCCAAAGCAATCCTAAGCAAAACAACAACAACAACAAAAAAAAAAAACAACAAAAAAA chr4 + 94230402 25229679 25229678 25229753 25229679 25229678 25229753 75 AACAAAATGAACAAGCAACAAAAATAACCCAAACCAAAACAACAACAGCAACAAATAAAATACACGAAAGAAGGA ..x...:x.xx...::.:.x...::..:..x..x.............:.......x....x.x..:.x.:..::. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 138729600 51484955 +3411 chr4 + 190214555 163975152 163975151 163975212 61 TCTCATAATAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248035 75248034 75248088 75248035 75248034 75248088 54 TCACAAAATAAATCCTTC-------CTCTCTCTCTCTCTCTCTCACACACACACACACACa ..x..x......x.::..-------...................x................ 18M7D36M 48/54 88.9% 54/94230402 0.0% 7/54 13.0% 88727117 NA +3567 chr4 + 190214555 163975175 163975174 163975214 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 88727126 NA +3102 chr4 + 190214555 163975177 163975176 163975212 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 151373873 38840682 +3353 chr4 + 190214555 163975177 163975176 163975216 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 88727128 NA +3139 chr4 + 190214555 163975179 163975178 163975218 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 88727130 NA +3316 chr4 + 190214555 163975179 163975178 163975214 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 151373875 38840680 +3102 chr4 + 190214555 163975181 163975180 163975216 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 151373877 38840678 +50649 chr4 + 190214555 163988426 163988425 163989407 982 GTCCCACGGTGCAGAGAGCAGTGTTGGCAACAGTGGCTTGGCTC-TCTGATTTTATTAAATTAAA--CCTCCTCTTACCTCGACTTCCTTGTTCTTCTCTTTGTTTCTGCCCATTGAATTTCTCCCATTGCTGGCAGTCTCCCGTGCTGGGATTACGGAAATCTGGTGGAGGGGCATATTGGCAGGGCTGCAGGTGGCCAATCCCTGATTGGATGCCTTATCTCTTCACTCGCCCTGAGTAGCCCACCTGCACAATTGTTCATATCCTTGCTTTGCCAAGCTCAGGTCTAAACAAAGAGGGGAAAAATAGTGTTTGAGACACTGTGCAGCA-GAGGCCAGAGTCTTCTGGTCAAAATGTTAAA------CACATTGAAAGGGGAGTTAAAAGAAATGCAAGAACA------------AATAATCCAGGGAGTACTGCATTCTCCAAAGGATGATTTACTGCAAGTCATAATTGAACTGCTTTGTCACTGGAGCACCCCCTCTCCCC--------TAAGAGCATTGTGGGAGACAATTCAATTTCTATGGTACCTAATAACTGTCATGGAAACCAAGGAAACCTAGGTCTCACAGGCCCTTATTAGCAACTGCTT-CCTTTAATGGCACAGACTCCCACATTTGCAGCGGCTGCCGCTT-TGTTTTTGTTTATC--CTGATTCCCCAGGAGTCCACTAAGCACCCAGAGACACTGCATCTTGCTGACTACGTAAATAAGCAGACGGCTGAAAAGCTTAGTGTCCTA-TTTGGAGCCAAATCTCTTCCTTGAGAAGCGCGGCTAGCTGGCTGTGTCCTTCATGCATCTACAATAATCTGCTTAGGTCAAAGGATCTGCCCTGAAGTGAAGAGCATCGCATGAGATCGAATGAGGTGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAGA-GAGACCTGGAGCAATTGCAGATGTCTTTTTCTGGA--TGGTTGTAAAGAGAGTTAACCATT--CAGTGCACCTTTCTTACTAAAACATC chr4 + 94230402 24652306 24652305 24653289 24652306 24652305 24653289 984 GTCCTGCTGAGCAGCCAGAAACATTGGCTACAAAAGGCAGACTCATTCTACCGTACCAAAGCAAAGCCTCCCTCTTACCTCGACTTCCTTGCTCTTCTCTTTGTTTCTGCCCATTGAACTTCTCCCATTGCTGGCAGTCTCCCGCGCTGGAACTACAGAAATCTGTTGGAGGGGCATTTCTACTGTGCTGCAGGTTGCCAATACCTGATTGGATGCCTTATATCTTCACTCCCCCTGAGTAGCCCACCTGTATAATTGTTCATATCCTTGCTTTGCCAAGCTCAGCTCTAAATAAAAATGGG-AAAATATTATTTGAGAAACTGTGTAGCATAATGCCAGGGTCTTCCTTCAAAAAATATAAAGCAAAGCAAACTGAAAACACAAATGAGAAACA-GCAAGCAAAGAAGTAAGGCGTAATAATCCA--GAGTTTCACATTCTCAGAGTGATGAGTTGCTGTAAGTCGTAACTCCTCTGCCGTGTCCCTAGAGCACCCCTTTCCCCCCTAGCCCTCAAAAGCATTGTGGGAGACGATTCAATTTCTGTGTTACCTAATAACTGTCATGGAAACCAAGGAAACCTAGGTCTCGCAGGCCCTTATTAGCGATCACTTCCCTTTAATGGCACAGACTCCCACATTTGCAGCGGCTGCCACTTCTGCTTTTGTTTCCCATCTGATTCCACAGGAGTCCACTAAGCACCCAGAGGCACCGCGTTGTGCTGACTAGGTAAAGCAGCATAAGGCTGAAAAGCTTAGTGCCCTATTTTGGAGCCAAA--ATCTCCTTCAAAAGCACGGAGAGCTTGCAGTGTCCTTCATGCGTCTACAATAATCTGCTTAGGTCAAAGGATCTGCCTT-AAGTGAAGAGCAGCG---GTAAGTGAATGAGGTGT--------------------------AAAAATGAAGACAAGACTGGGAGCAATTGCAAACGTGCCTTTCTGAAGCTGGTAGTAA--AATGTTAACCCTTTGCTGGGCTCTTGTTTTCCTGAGACATC ....::.x.x....xx..x.:::.....x...:x:.x:x.:...-.::x.::x..::...x:...--.::.....................:..........................:.........................:.....:.:...:........x...........x.:x:.x.x.........x......x..................x.........x..................:.:................................x......:...:.x...-......x.:.......x......:....-:.x.....:......:xx:x....xxx....------..x.:.....:x:x.:x.:.:.:.x.-.....x.x.------------.........--....x:::.......x:.:x.....x..:...:.....:...:.xxx....:x....x..:.........:.::....--------:..:...............:...........:..x.........................................:...............:.:::...-.......................................:...-..:........x:.--........x........................:...:..:.:x.........x.....xx....x.x.................:....-............--x::.....x.:....:...xx....x..x.............:..................................:.-............x..---.x:.x:...........--------------------------.:...x.....-:....:x............:.:..x::......:.--....x....--.:x.......x..--.x.x..x.:.x.:..x..:.:..... 44M1I20M2I235M1D28M1I31M6I26M1D9M12I9M2D78M8I100M1I43M1I14M2I90M1I12M2D79M1D15M3D17M26D11M1I35M2I9M2D13M2I26M 772/944 81.8% 984/94230402 0.0% 78/944 8.3% 139336120 50878435 +3016 chr4 + 190214555 164006964 164006963 164007025 62 AAATAATAGAGGGAGCTCTGAAATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 61679329 61679328 61679390 61679329 61679328 61679390 62 AAATAGTAGAGGCATCTTTGAATGCAGACAGGAGCCAAAAAAAAAAACAAAAAAAAAACAAA .....:......x.x..:....xx.x..x.::.:xx...........x..........x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 102327635 87886920 +3059 chr4 + 190214555 164007340 164007339 164007394 55 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAGCAAACTTT chr4 + 94230402 54113482 54113481 54113536 54113482 54113481 54113536 55 CATGCCAGAAAAAAAAAAAAAGAAAAAATGCATAAAGATAGAAAAAGCAAGCATT ...x:..:.............:......x:x.x.....x.:.........:.x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 109893858 80320697 +3185 chr4 + 190214555 164007649 164007648 164007704 56 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCCCTGGTTTCTT chr4 + 94230402 75629972 75629971 75630027 75629972 75629971 75630027 56 TGTGTGCATGTGTGCATATGTCTGAATGTGTGTCTGCGTGCTTGCCCTGCTTTTCT ......::......::.:...x..x:.......x..:...:........x...::. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 88377677 NA +3127 chr4 + 190214555 164010232 164010231 164010275 44 TTTTTTTTTGTTGTTGTTTTTTGGTTTTTTTTTTTTTCTGTATT chr4 + 94230402 90203144 90203143 90203186 90203144 90203143 90203186 43 TTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTT-TGTATT ......x...........x..................-...... 37M1D6M 41/43 95.3% 43/94230402 0.0% 1/43 2.3% 73807088 NA +3370 chr4 + 190214555 164014052 164014051 164014134 83 CATGGTGATGCACCTCTGTACTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGTTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:.....x.--...x.:...........::........x.xx.x...x:::..........:..x:xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 87980855 NA +3360 chr4 + 190214555 164020788 164020787 164020873 86 ACACATGATGGCACACACCTGTAGTCCTAGCTACTGCAGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...:::...::...:--......:.:.......xx.:........x:xx.x.:.x.:.....:.....:..x.:x:.....:.. 17M2D67M 57/84 67.9% 84/94230402 0.0% 2/84 2.4% 87987594 NA +3017 chr4 + 190214555 164034607 164034606 164034739 133 AATATACATACATACATATGTGTGTGTGTATATATATATATAATGATTACCTGATAATAGCTT-----TATTATTTAGATTTTGGAAATA---ACAGTTATAGTAAATATC-----ATGTAATACAAAAAAC----CTTATTTTAAAAAA chr4 + 94230402 27702301 27702300 27702445 27702301 27702300 27702445 145 AATATACATATATTCCCAAGTGTGTGTGTATATATATATATA-----TTCCTAGAAATTGATCTTAAGTAatatatatatatatataatatatactgatataatatatatatacagatataatatatataATGATGCATATTTTCTAAAA ..........:..x.x:.x.......................-----.x...::x...x.x.:-----..x...x..x..x.xx:x....---..x.x....:..x....x-----..:.....:.x.x..:----.x......xx.... 42M5D16M5I22M3I18M5I16M4I14M 95/128 74.2% 145/94230402 0.0% 22/128 17.2% 136332306 53882249 +3285 chr4 + 190214555 164038364 164038363 164038435 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...xx::x.......:.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 88005158 NA +3357 chr4 + 190214555 164080641 164080640 164080710 70 TATTCTATTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTATATATATATCATTGCA chr4 + 94230402 85834533 85834532 85834602 85834533 85834532 85834602 70 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .....xx......x...................xx..:..x::..:::.:....x...:..:.:xx.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 78246108 NA +3009 chr4 + 190214555 164080663 164080662 164080703 41 TGTGTGTGTATATATATATATATGTGTGTGTATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x.:....:..............:......x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 115121988 75092567 +3219 chr4 + 190214555 164081079 164081078 164081137 59 GCTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x......:............:........x.xx.x...xx:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 88047873 NA +3288 chr4 + 190214555 164081675 164081674 164081738 64 AATTATGGGGAAAACATGCACATGTGCATGCATATACACACACACACACATGCACACACACACA chr4 + 94230402 68837080 68837079 68837143 68837080 68837079 68837143 64 AGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA .:..x...x:.:...:..::.:....::..::..:.....x.:...:....:....::...... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 95244595 NA +3061 chr4 + 190214555 164109898 164109897 164109944 47 ACCTAAAATAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAGAAAATGT chr4 + 94230402 63916286 63916285 63916332 63916286 63916285 63916332 47 ACCATAAGTAAAAGTGAAAAAAGAAAAAAAAAAAAAAGTGAAAATAT ...xx..:.......:......:..............:x......:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 100193612 90020943 +3385 chr4 + 190214555 164127034 164127033 164127117 84 ACAGAGTGAAACTCCGTC-------TCAAAACAAAACAAAACAAAACAAAACAAAGAGGAATATGTTATTGGAAACTGAACTGGAGAAACA chr4 + 94230402 56994515 56994514 56994603 56994515 56994514 56994603 89 acaaacaaaAACCCCACCACCACCACCAAAACAAAACAAAACAACAAAAAAAAAAGAAGAATGTGTTAAAGGTA--TAAATTGAAAAAACA ...:.xx:....:..::.-------:..................x.x....x.....:....:.....xx..x.--.:..:..:.:..... 18M7I49M2D15M 62/82 75.6% 89/94230402 0.0% 9/82 11.0% 107132519 83082036 +3213 chr4 + 190214555 164139486 164139485 164139549 64 TAAAGTCAAAAAAAAAAAAAAGAAGGAAAGGAGAAAGAGGGAGAAAGAGAAAGGACAACCTTCT chr4 + 94230402 40414738 40414737 40414801 40414738 40414737 40414801 64 TAAAATTAAAGGAAAAAAAAAGGGGGGGGGGAAAGAAAGGAGGGGAGAGGAAGAAAAATCTGCT ....:.:...::..........::..:::...:.:.:...::.::....:...:.x..:..x.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 123724748 66489807 +3383 chr4 + 190214555 164176931 164176930 164177019 89 TACCTTGTGCGCTCTCTCTCTCTCTC------TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATA-TATATACAAATGATA chr4 + 94230402 4618329 4618328 4618423 4618329 4618328 4618423 95 TATATTGTG-GCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATA ..:x.....-...x.:.:...:...:------.x.......::..............::x...::......x.x......-....x.:.x..x... 9M1D16M6I48M1I15M 67/88 76.1% 95/94230402 0.0% 8/88 9.1% 159558602 30655953 +3076 chr4 + 190214555 164176943 164176942 164177012 70 TCTCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATACA chr4 + 94230402 4618344 4618343 4618418 4618344 4618343 4618418 75 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA .:...:...----.::.x.......::..............x:x...::......x.x......-....x...:. 9M4I51M1I10M 54/70 77.1% 75/94230402 0.0% 5/70 7.1% 159558599 30655956 +3352 chr4 + 190214555 164176943 164176942 164177010 68 TCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATA chr4 + 94230402 4618346 4618345 4618418 4618346 4618345 4618418 73 TCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA ...:...----.::.x.......::..............x:....::......x.x......-....x..... 7M4I51M1I10M 55/68 80.9% 73/94230402 0.0% 5/68 7.4% 159558597 30655958 +3018 chr4 + 190214555 164176955 164176954 164177015 61 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACAAAT chr4 + 94230402 60831530 60831529 60831590 60831530 60831529 60831590 61 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAAT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x:.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 103345425 86869130 +3150 chr4 + 190214555 164176959 164176958 164177011 53 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATAC chr4 + 94230402 60831530 60831529 60831582 60831530 60831529 60831582 53 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACAC ...x.....x.............:.:.......:.:....:.:.:.:::.:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 103345429 86869126 +3091 chr4 + 190214555 164211384 164211383 164211455 72 ATATACACACACACATATATATATATATACCAATTGCATAAATGCATGCAATTATTATTTCTCAGTAAAAAT chr4 + 94230402 23477854 23477853 23477925 23477854 23477853 23477925 72 ATATATACACATACATATATAAATATATATTTGTTTTATAGGAGTGTAAAATAGTAACTTTTCAGTAACAGT .....:.....:.........x.......::x:..x:...::x.::.:x...x:.x.:..:.......x.:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 140733530 49481025 +3730 chr4 + 190214555 164256385 164256384 164256468 84 AAACAAAAAAAACTAAAAATG------TGAACTAACTTGTAGCACAAGAAGCTTAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAA chr4 + 94230402 41705408 41705407 41705497 41705408 41705407 41705497 90 AAACAAAACAGACACTGACTGACGTCCTGAACCACTCTGTGGCAGGAGAAGCTTCAAAGAGAAAAAAAGAAAAAGAAGGGCAAAGAAAAA ........x.:..xxx:.x..------.....:.x::...:...x:........x...:.:.......:.:......::.x......... 21M6I63M 62/84 73.8% 90/94230402 0.0% 6/84 7.1% 122550977 67663578 +3192 chr4 + 190214555 164259547 164259546 164259612 66 AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAGAAAAAAGAAAAAAAAAAGAAAAGAAGAAGTATA chr4 + 94230402 61014670 61014669 61014735 61014670 61014669 61014735 66 AAAAAAGAGGAAAGAAAAAGAAAAAGGAAAAAGGCTTCAGAAAAAAAAAGCAACTGATGAAGAACA ......:.::...:...........:.......:xxxx...........:x..xx..x....x.:. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 103244877 86969678 +3068 chr4 + 190214555 164267757 164267756 164267811 55 AGAAATTAAAAAAATAAATAAAATAAACCTGCAAAGAGAGCCAGCAAATAAATTT chr4 + 94230402 53112929 53112928 53112983 53112929 53112928 53112983 55 AGAAAGTAAAAAAAAAATTAGTACAAACCTGGAAAAAAAGCCATTAAATAAATCT .....x........x..x..:x.:.......x...:.:.....x:........:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 111154828 79059727 +3220 chr4 + 190214555 164338836 164338835 164338901 66 GTGGTACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:.::.--....:.:...........::........x.xx.x...x.:........::.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 88305635 NA +3407 chr4 + 190214555 164370777 164370776 164370849 73 GTGCCCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCTCTTGAGCCCGGGAGGCGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....x.x......:...........::........x.xx.x...x.x.....:...:.:..x:xx:..:..:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 88337573 NA +3284 chr4 + 190214555 164373299 164373298 164373414 116 TTCTTCCTGCAGAGAA----ACTGAATCTTCCCATTAAAAATTAATGTGAAAA---ACTACTTTTTTTTTTTTTTTTTTTTTTTGAGATGAGTCTCACTCTCACCCAGGC---TAGAATACAATGG chr4 + 94230402 22126476 22126475 22126601 22126476 22126475 22126601 126 TTGTTCCTATAGGAAATTAACCTTAACCTTCCCTTTAAATTTTCATGTGAAAATACACACCTGTTTTTTTGTTTTTTTTTTTTTCACTTGGAACTTAATCCAGCAGAAGCATGTAGACTAGACTGG ..x.....::..::..----x..x..:......x.....xx..x.........---..xx..x.......x.............x.xx..::x..:.x..:x:.xx.:..---....x..x.x... 16M4I33M3I54M3I13M 83/116 71.6% 126/94230402 0.0% 10/116 8.6% 142246823 47967732 +3291 chr4 + 190214555 164403344 164403343 164403419 76 CTGATCCTCTTTTTT------TTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTACATGAAGTCTCACCCTGTGGCCTG chr4 + 94230402 90152611 90152610 90152690 90152611 90152610 90152690 80 CTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCA--CTGTGAGCTG ...x...:::..:..------.....:....::.:.....:.x...............x.x...:.:...--.....:x... 15M6I49M2D10M 57/74 77.0% 80/94230402 0.0% 8/74 10.8% 74250733 NA +3385 chr4 + 190214555 164419977 164419976 164420032 56 TCAAAACAAACAAACAAACAAACAAACAAACAAAAACGTAAGTGTCCATCAATGAC chr4 + 94230402 27908356 27908355 27908411 27908356 27908355 27908411 56 TTAATACAAAATAAAAAACAAACAAACAAACAAAAACGGAAGGGTCAATTAATGGC .:..x.....xx..x.......................x...x...x..:....:. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 136511621 53702934 +3876 chr4 + 190214555 164436376 164436375 164436523 148 ATAGCAACAGGAGAATATAAACTCTCAAAAGACAAAGATCTCATTTTCATGCAAATGATTCAAATAATATTTTTGAAGTCAAGCATAAGATTGATAGTATGCAAATAATATTGTCTGCAACATATTTTTCT----ATATATTTCAATTTTTT chr4 + 94230402 41436459 41436458 41436595 41436459 41436458 41436595 137 ATAGCAGTAGCAGCTGATGAACTCTTGGGAAATAAAGATTCCATTTTCATGCAAATATTCTAAATAGCA---AAGAGGTGAGGAAGAAAA---ATGGTTGATAAATAGAATT---------ATTTCTTTCTTAGAATATATTTCAGTGTTTT ......::..x..xxx..:......::::.:.:......::...............:x.::.....::.---xx..:..x.:.x.x..:.---..:..xx::.....:x...---------..x.:.....----..........:.x.... 69M3D18M3D19M9D10M4I17M 93/133 69.9% 137/94230402 0.0% 19/133 14.3% 122999917 67214638 +3133 chr4 + 190214555 164483457 164483456 164483525 69 GTGTGTGTGTGTGGATGTGTGTGTGTGTGTGTGCGCACATGCCTGCACGTGCCTGCGTGTGGGTGTGCA chr4 + 94230402 79265519 79265518 79265587 79265519 79265518 79265587 69 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA .............x.........xx...:.:.:.::...:.:x.....::..xx:.:.:.xx....x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 85217938 NA +3018 chr4 + 190214555 164483770 164483769 164483846 77 TAAGGATTTA--TGTTACATAAGAATAGTTGAAAAAAATAAAAATAGTAGCTAACATCTGTCAAGAGCCTGCATTGTTA chr4 + 94230402 65663825 65663824 65663903 65663825 65663824 65663903 79 TAAAGATCCAAATGCAACAGAAAACAAGGTAATGAAAATGAAAATATTAGTTGACATCTGTCAAAAATTTGAATTATCA ...:...::.--..:x...x..:.xx..x.:.x:.....:......x...:.:...........:.:::..x...:.:. 10M2I67M 53/77 68.8% 79/94230402 0.0% 2/77 2.6% 98819945 91394610 +3456 chr4 + 190214555 164489598 164489597 164489671 74 GTGCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGCACAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:........:..::........x.xxxxx..x.............:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 88456394 NA +3041 chr4 + 190214555 164501492 164501491 164501538 47 CAAAATTAAAAACACAAAAGCAAAAACAACAAAAAAGCCCCCTCAAA chr4 + 94230402 63375328 63375327 63375374 63375328 63375327 63375374 47 CAAAAATAAAAATATAAAAAACAAAACAACAAAAAAGCCCACCCAAA .....x......:.:....:xx..................x.:.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 101126164 89088391 +3179 chr4 + 190214555 164503617 164503616 164503690 74 TTCTCCTCTTTTTCTGGAACTTCAATATAATGTAGATCAATTGTCTTCATTCCATTTTTTTTTTTTTTTGTATT chr4 + 94230402 70594752 70594751 70594825 70594752 70594751 70594825 74 TTTACATCTGCTTCCAGTCATCCGATATAATGCAAATCACTTTCTCTCATTCCCTTTTTCTTTTTTTTTGCCTT ..:x.x...x:...::.xxx.:.:........:.:....x..x:::.......x.....:..........:x.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 93908865 NA +3854 chr4 + 190214555 164512657 164512656 164512729 73 TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:.::........x.xx.x...x.x...........:..x.xx:..:..:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 88479452 NA +3466 chr4 + 190214555 164512787 164512786 164512859 73 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACGTGTTATATTTTAATGGTTTTTAAATATGT chr4 + 94230402 43153637 43153636 43153709 43153637 43153636 43153709 73 AAAAGAAAATAAAGAAGTGGAGGCCAAAAAAAAAAAAAAAAACGTTATATTTTTTTATGCTTCTTAAAAATGT ....:....x...:..:x::.::xx...............:....xx...x....x...x..:.....x.... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 121359150 68855405 +3044 chr4 + 190214555 164556223 164556222 164556291 69 GGAGAGTGTATGTGTCAAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTGATTTGCATAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT ....::.x.:.:..:.x.:...:......x.......:....x.x::..:..:...:.xx.x....:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 86709459 NA +3163 chr4 + 190214555 164665775 164665774 164665816 42 TATACATGTGCACACATACACACACACACACACATTCACTAA chr4 + 94230402 43671855 43671854 43671896 43671855 43671854 43671896 42 TATACATGTATACACATGCACACACACAAACACATGCACTAA .........::......:..........x......x...... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 120993920 69220635 +3090 chr4 + 190214555 164688031 164688030 164688123 93 ATTCATCCAAGTTGTTGTGTACACCACTAATCTATTCTTTTTTAAAAAAAAATTTATTGATACATAATAATTATACACATTTATGAGACACAT chr4 + 94230402 71671134 71671133 71671215 71671134 71671133 71671215 82 ATTGACCCAGGACACTGT-----CCACT--TGTGTTCTTTTTTGAAAAAAAATCTATCTACACATGATATCTATACA----TATCATACACAT ...x.:...:.x:::...-----.....--.x.:.........:.........:...:x.:....:...x:......----...x.x...... 18M5D5M2D47M4D12M 63/82 76.8% 82/94230402 0.0% 11/82 13.4% 93016897 NA +3737 chr4 + 190214555 164701444 164701443 164701514 71 GTACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:..x......:...........::........x.xx.x...x.............:..x:xx:..:..:. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 88668238 NA +3214 chr4 + 190214555 164709039 164709038 164709112 74 GTTGTGCACCTTTGGTCCTAGCTACTTGGGAGGCTGAGATGGGAGGACTGCTTGAGCCCAGTAGGTCGAGGCTG chr4 + 94230402 76033201 76033200 76033274 76033201 76033200 76033274 74 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..x......x.x.:..:.:.........::........x:xx.x.:.x::.....:.....x..x.:x:..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 88675838 NA +3230 chr4 + 190214555 164710887 164710886 164710932 46 TTCAAAAAAATTTTTTCTTTTCTTTTTTTTTTTTTTTTGAGACAGA chr4 + 94230402 37291740 37291739 37291785 37291740 37291739 37291785 46 TTAAAGAAAATTCTTTATTTCCTTTTTTTTTTTTTTTTGAGAGAGA ..x..:......:...x...:.....................x... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 127419147 62795408 +3257 chr4 + 190214555 164735885 164735884 164735942 58 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033207 76033206 76033264 76033207 76033206 76033264 58 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...x....:.:...........::........x.xx.x...x.:........::.:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 88702678 NA +3397 chr4 + 190214555 164739786 164739785 164739843 58 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACCTGAACCCGGGA chr4 + 94230402 76033206 76033205 76033263 76033206 76033205 76033263 58 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ....x......:.........:.::........x.xx.x...x...:.......:.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 88706580 NA +3029 chr4 + 190214555 164749435 164749434 164749499 65 TGGCAAAAAAAAAAAAAAAAAAAAAAAAGCCACTTATTGGATTAATGTAATTTCTAAACAATGGC chr4 + 94230402 32691995 32691994 32692059 32691995 32691994 32692059 65 TGGCAAAACAGAAAAAAAAAAAAAGGAAGGTACTTTCTGAACTATTACAAGTCCTGAAAGACAGC ........x.:.............::...x:....x:..:.:..x.::..x.:..:..x:.::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 132057440 58157115 +3241 chr4 + 190214555 164755476 164755475 164755548 73 TCTCAAACAGAAAGGAAAGGAGAGGAAAGGAGGGGGGAGGAGAGGGGAAGGGAGGGAGAGGAGAGGAGGGGAG chr4 + 94230402 4113354 4113353 4113426 4113354 4113353 4113426 73 TCTGAAAGGAGAAGTAAAGGGGGGGAAAGGAGGGGGGTGAAGAAAGAGAGAGAGAGCAGGGAGTGCAAGACAG ...x...x:::...x.....:.:..............x.:...::.::..:...:.x::....x.x.:.:x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 160642122 29572433 +3272 chr4 + 190214555 164766659 164766658 164766740 82 GTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGGGACTGAGGCAGGAGAATCGCTTGAACCCGGGAAGCGGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.:::.:.....x.xx.x...x.:.........:.:.:x:xx:..:..... 6M5D71M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 88733458 NA +3570 chr4 + 190214555 164785096 164785095 164785155 60 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x....:.:.........::::........x.xx.x...x.............:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 88751891 NA +3065 chr4 + 190214555 164785317 164785316 164785375 59 CAAAATGGGTTTCTTTAACTATTTTTTTGCTTGTTTGTTTACACTTTGTTTTTCAAAAT chr4 + 94230402 12804366 12804365 12804424 12804366 12804365 12804424 59 CAAGATGATTTCCTTTCACCACTCTACTTTTTGTTGGTTTGCATTTTATTTTTCAAAAT ...:...:x..:....x..:.:.:.x:.x:.....x....:..:...:........... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 151980951 38233604 +3007 chr4 + 190214555 164785630 164785629 164785670 41 AACTTATTGTGTGTGTGTGTGTATATATATATATATATCTT chr4 + 94230402 92043257 92043256 92043297 92043257 92043256 92043297 41 AACTTATTCTGTGTGTGTGTGTATATGTATGTAAATATCCT ........x.................:...:..x.....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 72742373 NA +3007 chr4 + 190214555 164785630 164785629 164785670 41 AACTTATTGTGTGTGTGTGTGTATATATATATATATATCTT chr4 + 94230402 92041387 92041386 92041427 92041387 92041386 92041427 41 AACTTATTCTGTGTGTGTGTGTATATGTATGTAAATATCCT ........x.................:...:..x.....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 72744243 NA +3326 chr4 + 190214555 164794674 164794673 164794747 74 GTGCGCCTGTAGTCCCAGCTCCTCAGGAGGCTGAGGCAGGAGAGTCGCTTGAACCCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:......x..::::........x.xx.x..:x.:...........:.:x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 88761470 NA +3105 chr4 + 190214555 164797291 164797290 164797438 148 ATTGTCTATCT--CTGTCTGCAAGAAGGTAAACTTGGGGATATGGGAAGAAAGAGTATAT-TAGTCAAGGTTTACAGAAACACAGACCAATAGAATATAGATATAAACACAGATACAAAAGGACATGTATATATATATGTATGTATGTATT chr4 + 94230402 45400495 45400494 45400639 45400495 45400494 45400639 145 ATTTTCTACCTGGCAACCCCTAAATAAATGAATTTGGGA----TGAATAAAAACGTCTATCTAGTTATGGTGAGAAGTGACAGAGG--AAAAGAATGGAAATGTAACTGCACATGCACACACAGATGTATACATTTATGTATATATGTATT ...x....:..--.x::.:x:..:x.::.:..:.....:----x.:.x:...:x..x...-....:.x...xx:x..x:...x..:--..x.....:x.:..:...x::..x..:..x.x:x.x.......:..x.......:........ 11M2I26M4D17M1I25M2D63M 92/142 64.8% 145/94230402 0.0% 9/142 6.3% 119396796 70817759 +3288 chr4 + 190214555 164799258 164799257 164799327 70 ACCCGTAATCCCAGCTACTTAAGAGGCTGAGGTGGGAGGATCGCTTGAGTCCAGGAGTTCAAGGCTGCAG chr4 + 94230402 76033208 76033207 76033277 76033208 76033207 76033277 70 ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:...:.:..........:.:........x:xx.x.:.x.:.....::....:..:.:x:.....:.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 88766050 NA +3059 chr4 + 190214555 164809868 164809867 164809919 52 TAAGTTTTTTTGTTTGTTTTGTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTT chr4 + 94230402 6465828 6465827 6465879 6465828 6465827 6465879 52 TGGGGTTTTTTGTTTGTTTTGGCTTTGTTGTGTTATTTTGCGTTTTTTTTTT .::.x................x:...x....x..x....x:........... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 158344040 31870515 +3008 chr4 + 190214555 164809876 164809875 164809928 53 TTTGTTTGTTTTGTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTAGATAGAGT chr4 + 94230402 3841810 3841809 3841862 3841810 3841809 3841862 53 TTTGCTGGTTTTTTGTTTTTTGTTTTATTTTTGGTCTTTTTTTTGAATGCAGT ....:.x.....x.x...........x.....x..:........::..:x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 160968066 29246489 +3400 chr4 + 190214555 164812069 164812068 164812142 74 GCGCACCTGTAGTCCCAACTACTCAGGAGGCTGAGGCAGGAGGATTGCTTGAACCCGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...:.....::::........x.xx.x.:.x::.........:....x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 88778865 NA +3194 chr4 + 190214555 164822503 164822502 164822548 46 GTTTTCTGTTGTTTTGTTTCTTCTTTTTACTTTGAGGATATTGCTT chr4 + 94230402 7711741 7711740 7711786 7711741 7711740 7711786 46 GTATTTTGTTGTTTTGTTTCTTCTTTTTCCTTAGAGAAAATTGCTT ..x..:......................x...x...:.x....... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 157110762 33103793 +3922 chr4 + 190214555 164826260 164826259 164826437 178 AAGGAAACAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGAAGAGATGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA-AGGAAGGAAGGAAGGAAGGAGTAAGC chr4 + 94230402 49044652 49044651 49044822 49044652 49044651 49044822 171 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAG---GGAAGAGTTAAAGAAAGAAGAA-------AGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGC ..:::.x:...:.....::..x..:::.xx.::.:x:.xx.......x.::x..x:....:x.--...x:......---.:....:xx..........::.-------..:.....:.x.:...:..:...:...x....x.:::..xx:..:x-......:::.:..:x:..x.:..... 63M2I11M3D22M7D46M1I26M 105/168 62.5% 171/94230402 0.0% 13/168 7.7% 115781608 74432947 +3697 chr4 + 190214555 164826282 164826281 164826389 108 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGAAGAGATGAAAGAAGGAAGGAAGGAAG chr4 + 94230402 65363837 65363836 65363944 65363837 65363836 65363944 108 AAGAAATGAAAAACATCAAGGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAG ..::..x....:.x.xx...:x::..:::...:.x:xx.:.:.:...x..:....::.:....x.x......:..xx..........:....:..x..x:.:.:.x.. 108M 68/108 63.0% 108/94230402 0.0% 0/108 0.0% 99462445 90752110 +3024 chr4 + 190214555 164826284 164826283 164826364 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGAA chr4 + 94230402 41112178 41112177 41112258 41112178 41112177 41112258 81 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...::x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 123714106 66500449 +3952 chr4 + 190214555 164831928 164831927 164832066 139 ATACACACATACACACATATATGTACATATACACACACATATATGTACATATACACACACATATATATGTATATATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTTTTTTTTTTGAGA chr4 + 94230402 72529188 72529187 72529318 72529188 72529187 72529318 131 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-------TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAA ..x..:.....:...:......:.x:x....:x..:::...x.xx.x.x.:xxxx..xx...x:.:..x...-------:....x.-...::::...................:.........x.x....:.xx...:. 72M7D7M1D52M 89/131 67.9% 131/94230402 0.0% 8/131 6.1% 92302740 NA +3952 chr4 + 190214555 164831928 164831927 164832066 139 ATACACACATACACACATATATGTACATATACACACACATATATGTACATATACACACACATATATATGTATATATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTTTTTTTTTTGAGA chr4 + 94230402 72525615 72525614 72525745 72525615 72525614 72525745 131 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-------TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATAAGGTTTTCTAGTGAAA ..x..:.....:...:......:.x:x....:x..:::...x.xx.x.x.:xxxx..xx...x:.:..x...-------:....x.-...::::...................:.........x.x....:.xx...:. 72M7D7M1D52M 89/131 67.9% 131/94230402 0.0% 8/131 6.1% 92306313 NA +3284 chr4 + 190214555 164831948 164831947 164832020 73 ATGTACATATACACACACATATATGTACATATACACACACATATATATGTA-------------TATATACACACATATATATGTG chr4 + 94230402 23247722 23247721 23247807 23247722 23247721 23247807 86 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ....:::...:.........x....x......::.........:.:.:::.-------------..:..:x.:.x........:.. 51M13I22M 54/73 74.0% 86/94230402 0.0% 13/73 17.8% 141584226 48630329 +3285 chr4 + 190214555 164831988 164831987 164832049 62 ATATATATGTATATATACAC----ACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 + 94230402 27325491 27325490 27325556 27325491 27325490 27325556 66 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:::....xx.:.......----..x..x..............:.........:::..:...... 20M4I42M 49/62 79.0% 66/94230402 0.0% 4/62 6.5% 137506497 52708058 +3389 chr4 + 190214555 164831994 164831993 164832062 69 ATGTATATATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTTTTTTTTTT chr4 + 94230402 6857610 6857609 6857675 6857610 6857609 6857675 66 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA---ATTTTTTTCTCTT ..:....::....:..:....x..........x...........x.:x.x...---..x.....:.:.. 53M3D13M 52/66 78.8% 66/94230402 0.0% 3/66 4.5% 157974384 32240171 +3312 chr4 + 190214555 164831998 164831997 164832062 65 ATATATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTTTTTTTTTT chr4 + 94230402 6857610 6857609 6857674 6857610 6857609 6857674 65 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCT ........::.....::...:x:.........x.........:.x.:x.x...xx......:.:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 157974388 32240167 +3555 chr4 + 190214555 164834378 164834377 164834469 92 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTAAGATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.........::::........x.xx.x.:.x.x.:.........:..x:xx:..:..:..------..x..x...... 74M6D12M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 88801174 NA +3144 chr4 + 190214555 164836261 164836260 164836324 64 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATAAAAAAATAT chr4 + 94230402 90710415 90710414 90710478 90710415 90710414 90710478 64 TCTCTAAACATAAAAAAGTATTGCAAAAAAATATATATATATAGACATACACACACTAAAATGT ....x...x.x......:x.xx:x...................x...:.....:.xx.....:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 74125846 NA +3376 chr4 + 190214555 164836267 164836266 164836319 53 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATAAAAA chr4 + 94230402 45036940 45036939 45036992 45036940 45036939 45036992 53 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAA ...........x.....xx......:...x.x...:...........x..... 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 119799327 70415228 +3173 chr4 + 190214555 164836268 164836267 164836317 50 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATAAA chr4 + 94230402 1495000 1494999 1495049 1495000 1494999 1495049 50 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGA ...x.:.........x.:...............:.::...:...:...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 163341268 26873287 +3376 chr4 + 190214555 164836269 164836268 164836321 53 AAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATAAAAAAA chr4 + 94230402 45036940 45036939 45036992 45036940 45036939 45036992 53 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAA ...........x.....xx....x.:...x.x.............:....... 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 119799329 70415226 +3252 chr4 + 190214555 164836304 164836303 164836431 128 CACACACACATAAAAAAATATATATGTGTATATATATTTGTATATATATACATAAATAT-ATGTATATGTGTATATATATATATACATAAATATATGTATATGTATATATATATATT-TGATCAATAGGA chr4 + 94230402 56938583 56938582 56938711 56938583 56938582 56938711 129 CACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATAACAGATAC-TGTATTCATTATTCTGTACATGCAGATGTATATGCATATAAAAGCATTAAAATCAGCAGGA ......:.x...x.xx..x.....x:..x......::..x.....:...x..x.x....-.::x...:-.....x:..xxx.x.::.:.x::.x.........:.....x.x::...-x:....::.... 59M1I8M1D48M1I12M 85/127 66.9% 129/94230402 0.0% 3/127 2.4% 107897721 82316834 +3691 chr4 + 190214555 164836687 164836686 164836752 66 GTGGTGCACGCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCCCTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..........--....:.:...........:x........x.xx.x...x.x...........:.. 10M2D54M 53/64 82.8% 64/94230402 0.0% 2/64 3.1% 88803486 NA +3609 chr4 + 190214555 164837681 164837680 164837792 112 AGGAAAGATATGTATATATATGTGTGTGTGTGCGCGCATATGTATGT----GTATATATGTGTGTGTGCAAATATATGTACATGTGTGTGTGCAAATATATGTATATATGTGTGTG chr4 + 94230402 21109182 21109181 21109297 21109182 21109181 21109297 116 AGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ......xx.::x....:..:.....x.x....x...:..x.:.....----::.....:x:....::x:.x.::.......x::..:x.x..::x....:.....:x..:..::.. 47M4I65M 72/112 64.3% 116/94230402 0.0% 4/112 3.6% 143728499 46486056 +3438 chr4 + 190214555 164840464 164840463 164840546 83 CGTGGTGGTGGGCGCCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGATTCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.:........x..::........x.xx.x..xx.............:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 88807267 NA +3567 chr4 + 190214555 164843150 164843149 164843232 83 CATGGTGGCATATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:::.:.--....:.:.......:...::........x.xx.x...x.:...........:..x:xx:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 88809953 NA +3331 chr4 + 190214555 164850869 164850868 164850949 81 AACTTACATAT---ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823251 7823250 7823334 7823251 7823250 7823334 84 AGCTCACGTATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT .:..:..:...---.:...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x:... 11M3I70M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% 157027618 33186937 +3222 chr4 + 190214555 164850887 164850886 164850953 67 TATATATATATATATATATATATATATATATATATATT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x..----..:...x..:..............x:... 38M4I29M 52/67 77.6% 71/94230402 0.0% 4/67 6.0% 157027623 33186932 +3410 chr4 + 190214555 164850889 164850888 164850962 74 TATATATATATATATATATATATATATATATATATTTT---TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG chr4 + 94230402 7823264 7823263 7823340 7823264 7823263 7823340 77 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTG ..:...:.........:.:......x.:.:x.x..:..---x..:...x..:..............x:.....:::. 38M3I36M 55/74 74.3% 77/94230402 0.0% 3/74 4.1% 157027625 33186930 +3009 chr4 + 190214555 164850891 164850890 164850956 66 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.xx.:..xxxx..:...x..:.............. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 157027627 33186928 +3017 chr4 + 190214555 164850902 164850901 164850940 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 140058276 50156279 +3012 chr4 + 190214555 164852030 164852029 164852088 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATGGCTTGAATCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...xx:......:.::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 88818824 NA +3237 chr4 + 190214555 164852446 164852445 164852511 66 GTGGTGCACACCTGTAGTTCCAGCTACTTGGGAGGCTCAGGTGGGAGGATCACTTGAGCCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .........:--..................::.....x..x:xx.x.:.x.......:..::.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 88819245 NA +3742 chr4 + 190214555 164852600 164852599 164852746 147 AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAAGGAAGGAAGGATAAAAGGAAGGAAGGAAGGGATGAAGGAAGGAAAAAAAGGAAAGAAGGAAGGAGGGAAGGAAGGAAGAAAGGA---------AGGAAAGAGGAAAGGAAGGAA chr4 + 94230402 49044662 49044661 49044817 49044662 49044661 49044817 156 AGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAA .::...:::.:x...::.xx.:..:x..xx:...:..x..:x:.x::....x.:x..:x..:::.:.....:.x.:...:...:.:...::x....:.x.:...:.::...:...x....x.:::.---------.....:::.....:x:..x.. 126M9I21M 85/147 57.8% 156/94230402 0.0% 9/147 6.1% 115807938 74406617 +3718 chr4 + 190214555 164855062 164855061 164855144 83 CGTGGTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--......:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 88821865 NA +3116 chr4 + 190214555 164859117 164859116 164859199 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGTCTGGAGGATGGCGTGAACCCGGGAGGTGGAGATTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........::::........:.:x.x.:.xx:.x.......:.:..x.xx:.::..:.. 9M2D72M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 88825920 NA +3756 chr4 + 190214555 164864301 164864300 164864593 293 ATCTCAAAGAAAAGAAGAAGAAGAAGAAGAAGAAGACGAAGA---------------AGAAGAAGAAGAAGAAGAAGAAGAAGAAGA----------AGAAGAGGAAGAGG----------AAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGG------------AGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGA-----------------------AGAGGAAGAAGAAGAAGAAGAAGA----AGAAGAAGAAGAAGAAGAAGAAGAATGGAAAGT--ATAGTATTTACCATGCTACTTAGAGGGTAGTTCAAGTAAGAGGGGAAAAAATAAAGCAAGGCGGTAAAATGGCA chr4 + 94230402 25357 25356 25715 25357 25356 25715 359 atattaaggaaaggaaagaacaaaaagattagaaaataaaaAGTTCAAAGTATTCATAAAGCAAAAAGAAATTGGGAGAGGACAGGGCTTCCCCCAGGGAGGGGGGACAGGGCCTGGCTTTAAGGGTAAGAATATGAAGAAGAAATAGAAGAGGGATCAGAAAATTAGAAGTATGAATCAGAAAAGCAGGAAAAGGAATGGAAAATGGATTATACACAATAATTTGAATAATAAAGGAATCAGAAATAGAAAATAATATTACAAAAAGGATAAAAAGATAGAAAATGAAAAGTTAAAAGTATT----------CTTAAAGCAAACAGCAATTGGAGAGGAAGGTGAGGGGGCATGGCTCTGAGATCGCA ..x.:..:....:...::.:x.:..::.xx....:.::..:.---------------.:.:x..:.....:xx.::::..:.x.:.:----------:..:.:..:.x...----------...:.x....:x.x.........:x...:....------------..:..x.x..:xx:..::..x.....:.....x:.:..:x...-----------------------.:.....xx....:x....:.x:.----.x..:...:.x..:....x::.:....:.....--.x......----------....:..x:x.xxx...x.:::::..:.::x:.x:::...x...xx.:.:..x... 42M15I30M10I14M10I33M12I43M23I24M4I33M2I8M10D56M 175/283 61.8% 359/94230402 0.0% 86/283 30.4% 164838944 25375611 +3123 chr4 + 190214555 164864364 164864363 164864433 70 AGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAG----AGGAGGAGGAGGAGGAGGAG chr4 + 94230402 35548760 35548759 35548833 35548760 35548759 35548833 74 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAG ...:.x...:.......x.....x.:..........x....x...:...:----..:..x.x.x:...:.:x.. 50M4I20M 52/70 74.3% 74/94230402 0.0% 4/70 5.7% 129315604 60898951 +3739 chr4 + 190214555 164864365 164864364 164864515 151 GAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAG-GAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGA------GGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATGGA chr4 + 94230402 35548685 35548684 35548842 35548685 35548684 35548842 158 GATAGAGAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCTCCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGAGTGGA ..x::....:.::::..x..xx.x..x....x.-.x..x:x:.....x:::..x..x:.x.xxx...:.------:....x:..........x.....x.:..........x....x...:...:xxxx.....x.x:x::....:x...x..:.... 33M1I35M6I83M 96/151 63.6% 158/94230402 0.0% 7/151 4.6% 129315680 60898875 +3148 chr4 + 190214555 164864370 164864369 164864417 48 AGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGA chr4 + 94230402 35548760 35548759 35548807 35548760 35548759 35548807 48 AGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGA ...:.x...........x.....x.:.......:..x....x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 129315610 60898945 +3967 chr4 + 190214555 164864381 164864380 164864516 136 AAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAG--------------------AGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAA chr4 + 94230402 1818707 1818706 1818862 1818707 1818706 1818862 156 AGGAGGGAGAGTAAGCAGGAGGATATGGGAATGGAGAGGGGTTGGAAGAGGAGGAGTAGGAGACAGAGGTGGGATGAgatggagatggggatgggacagtgataaggatggagatggtgacggggatggggatgggaatggagaaggagaagggga .:....:....x...x:.:..:.x.x.:::.x.::....:.xx...:.........x.....:x.....x:.::x:...x.:..--------------------....x.:...x.:x..x.::..x.::..x.:::.x.:.....:....x..:. 84M20I52M 86/136 63.2% 156/94230402 0.0% 20/136 14.7% 163045674 27168881 +3197 chr4 + 190214555 164864386 164864385 164864487 102 GAAGAGGAAGAGGAAGAAGAAGAAG----------AAGAGGAGGAGGAGGAGGAGGAGGAGGA------GGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA chr4 + 94230402 35548691 35548690 35548808 35548691 35548690 35548808 118 GAAAAGAGAGATGATCACGATGAAGTGTGCAGTGTGAGAAGTGAGGGTGGCAGCGTTCGAGAATTCTCCAGAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAA ...:..::...x..xx.x..x....----------:...:.x.::..x..x:.x.xxx...:.------:....x...........x.....x.:.......:..x....x...:... 25M10I28M6I49M 72/102 70.6% 118/94230402 0.0% 16/102 15.7% 129315695 60898860 +3762 chr4 + 190214555 164864387 164864386 164864517 131 AAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAG-----------AAGAAGAAGAAGAAGAAGAAGAAGAAGA--AGAATGGAAA chr4 + 94230402 1818707 1818706 1818850 1818707 1818706 1818850 144 AGGAGGGAGAGTAAGCAGGAGGATATGGGAATGGAGAGGGGTTGGAAGAGGAGGAGTAGGAGACAGAGGTGGGATGAgatggagatggggatgggacagtgataaggatggagatggtgacggggatggggatgggaatggaga .:....:....x...x..:..:.x.x.:.:.x.::....:.xx...:.........x.:...:x.....x:.::x:...x.:...x.::..x.-----------.:..x.:...x.:x..x.::..x.::..--:.......:. 93M11I28M2I10M 84/131 64.1% 144/94230402 0.0% 13/131 9.9% 163045680 27168875 +3163 chr4 + 190214555 164864412 164864411 164864483 72 AGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGA chr4 + 94230402 87436496 87436495 87436567 87436496 87436495 87436567 72 AGGGGTGGGGGGGGAGGAGGGAGAGCACGGGCAGGCCGGTGAGGATGATGAGAAGGAAGAAGGAGCAGCAGA ..:..x..:..:........::...x.x.:.x.:.xx.:x.....x..x..::.........:..x..x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 77427916 NA +3104 chr4 + 190214555 164864422 164864421 164864498 77 GAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 35548761 35548760 35548837 35548761 35548760 35548837 77 GAGGCAGAGGAAGAGGTAGAGGCAAAGGAAGAGGACGAAGCAGAGGAAACCCTAGAAGTATGCAGAGAAATAGATGA ....x:.....:....x:....x.:..........x..:.x.......:xxxx.....x.x:x::....:x...x.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 129315661 60898894 +3065 chr4 + 190214555 164864425 164864424 164864495 71 GAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 + 94230402 87436497 87436496 87436567 87436497 87436496 87436567 71 GGGGTGGGGGGGGAGGAGGGAGAGCACGGGCAGGCCGGTGAGGATGATGAGAAGGAAGAAGGAGCAGCAGA .:..x..:..:........:....x.x.:.x.:.xx.:x.....x..x..::.:.......:..x..x... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 77427928 NA +3446 chr4 + 190214555 164878094 164878093 164878229 136 TCAAAACCAAACAGCTAAGATTTCAAAGAACCAGTAAGTTTGAAAAAAAAAAGAAAGAAAAGAGAGAAAAGAAGAGAGAAAGAAAGAAAGAAAGAAACAGAAAAA-AGAAAGAAAGAAAGAAAGAAAGAAATTAGAA chr4 + 94230402 52659735 52659734 52659863 52659735 52659734 52659863 129 TCAAATCTAAGTGA--AAGATTTCA------TACCAAGTTAGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAAATATATGTCAGAA .....x.:..::::--.........------:.x:.....x....:...:..xxx..:...::....x:..xx.x.x:..xx...............x.:....:-....:..x.:x..:x..:.x.x.x:.:.... 14M2D9M6D74M1I31M 86/128 67.2% 129/94230402 0.0% 9/128 7.0% 112218359 77996196 +3804 chr4 + 190214555 164878114 164878113 164878218 105 TTTCAAAGAACCAGTAAGTTTGAAAAAAAAAAGAA-AGAAAAGAGAGAAAAGAAGAGAGAAAGAAAGAAAGAAAGAAACAGAAAAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 71715020 71715019 71715125 71715020 71715019 71715125 106 TTACAAAGATATGGGAACTTTGAAAGGCTGCAGAATAGCAAAGTTAGGCAGGAAGAGAGAGAGAAGGAAAGTTTAAAACAAACAAAAGCAACAAAAGAAAAAAGAA ..x......xx::.x..x.......::xx:x....-..x....xx..:x.:.........:....:.....xxx:.....:.x.....x..x...::..:...... 35M1I70M 73/105 69.5% 106/94230402 0.0% 1/105 1.0% 93163094 NA +4962 chr4 + 190214555 164878907 164878906 164879009 103 CTTTTTCCTTCAGTTAATTTGACCATGAGAAGAAAACTGCGCAAACACAATTGCCTTCAGAGGAGATGTATGCCTCTCCATTCACGAGTACCCTTTCCCTGAG chr4 + 94230402 24873765 24873764 24873867 24873765 24873764 24873867 103 CCTTCTCCCGCAGCCAACCTGGCCCTGCGCAGGAAGCTGCACCGACACAACTGCTCGCACCGGCGGTGCATGCCGCTCCACTCCCGCGTGCCCTTTCCCTGAG .:..:...:x...::..::..:..x..x.x..:..:....:.x:......:...::x..xx..x.:..:.....x.....:..x..x..:............. 103M 72/103 69.9% 103/94230402 0.0% 0/103 0.0% 140005142 50209413 +3555 chr4 + 190214555 164883921 164883920 164884083 163 AAAAAAAAAAAGACAGAAAGACGAAAGAGACAAA----GACAGAAAGAAAGAGGAGGAGAAGAAATAAAAAGAAGAGAGAAAGAAGACAGAAAGAGAGGAAGAGAAGAA----------------------AGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAA chr4 + 94230402 25190328 25190327 25190515 25190328 25190327 25190515 188 AAAGCAAAGATGAGAGAGAAAAGAAAAAAATCAAATGTGGTAGAGAAGAAATGTAAGAGAGAATAGACAGAGATGAGAGGTATAAAACAGTAGAAAAAGGAGAGAAGAATCTCTCTTTTTTTGATGTTTCTTGATTA-GGAGGTGAAAATTAAAGTAAGGAAATAGAAGAGTGGGAGagaatcacagaa ...:x...:.x..x...:.:.x....:.:.:x..----.::...:.::..:x.x.:....::.x.x.x.:...x.....:x.x..:....x.::.:.:.:.........----------------------x..xx.-...:.x:....xx....x...:..xx:.:.:..x:........xx.x.... 34M4I71M22I6M1D51M 104/162 64.2% 188/94230402 0.0% 27/162 16.7% 139693593 50520962 +3116 chr4 + 190214555 164883945 164883944 164884044 100 AAGAGACAAAGACAGAAAGAAAGAGGAGGAGAAGAAATAAAAAGAAGAGAGAAAGAAGACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAG chr4 + 94230402 93820725 93820724 93820822 93820725 93820724 93820822 98 AACAGATTCACACATCAAGAAAGCAAGGGATAGGC--TCAAATCTAAAATTACAGAGGAGAGAAAGAGGGTGAGAGAAGAAAGAGAATAGAAGTAAAAAG ..x...:xx.x...xx.......x:::...x.:.x--.x...xxx.:.:xx.x...:..x........:.x:...............x:....x...... 35M2D63M 67/98 68.4% 98/94230402 0.0% 2/98 2.0% 71063220 NA +3906 chr4 + 190214555 164883951 164883950 164884061 111 CAAAGACAGAAAGAAAGAGGAGGAGAAGAAATAAAAAGAAGAGAGAAAGAAGACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGG chr4 + 94230402 15855374 15855373 15855480 15855374 15855373 15855480 107 CAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGA----GGAAAAGGACAGGAAAGAACGAAAAAGGG ...::::.:.:...:...:.x...x......x.xxx:..x:..xx..:.:.:.x.xxx......::............----....:.::.x.........x....x.... 78M4D29M 73/107 68.2% 107/94230402 0.0% 4/107 3.7% 149028577 41185978 +4339 chr4 + 190214555 164883962 164883961 164884186 225 AGAAAGAGGAGGAGAAGAAATAAAAAGAAGAGAGAAAGAA--------GACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA--------AGAAAGAAAGAAAGAAAGAAAGGAGA---------AGAGAAAGAAAGGAGAGAAGAAA chr4 + 94230402 1317354 1317353 1317598 1317354 1317353 1317598 245 AGAGAGCAGAGAGGCACACAAGCTAAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGAGTCAGGAGGGAGGGAAGAGAGAGCACAAG-----TGGGAAGAAATCTGGATTTAGAAAGGAAGGGCAGTCACCGGAATGGAAAAGGAGAGTTAAGGAGAGTCTGTCTTAGCAAAACAATGGGGAGAAGAAA ...:..x:...::.x.x.x.x:xx...:.x:........x--------::.....x:...xx.:::......:..:....:....:.....:..x::xx:...:::.:.:x.:.::x...xx..:.:.:...:..:.:...:x:x...-----x:.:......xxx:..xxx......:...::--------:...x.:..:.::::.:xx.......---------..x:...x..x..:......... 40M8I100M5D31M8I26M9I23M 133/220 60.5% 245/94230402 0.0% 30/220 13.6% 163566608 26647947 +4155 chr4 + 190214555 164883983 164883982 164884200 218 AAAAAGAAGAGAGAAAGAAGACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAA----AGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAACAAAGAGAGA chr4 + 94230402 65771128 65771127 65771340 65771128 65771127 65771340 213 AAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAA---------AAAAAGAGAATAAAAGAGAGAAAAGCACAAA-----AATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAATGA ....:.x....::.x..::x.x.x.....x..:..x.xx..:x..:.xx:.x......x.----..:.:.xx:..:..---------..::......x:.....::.....:x.x...-----...x.:..:..::.....xx...:x....:x.::-----::..:...::...:.:x...x......x.x......x..x:.x.:.:xx.:x...x...:.:x.. 60M4I14M9D31M5D34M5I65M 128/204 62.7% 213/94230402 0.0% 23/204 11.3% 99112855 91101700 +4272 chr4 + 190214555 164884005 164884004 164884169 165 AGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAA---------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAA chr4 + 94230402 34805287 34805286 34805459 34805287 34805286 34805459 173 AGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATA-AAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAA ....:.:xx..:..x.::......x:...:.:.:.....::..x.x:.:...::...x.x...x..x.-..:x.x::..:.....:x.x.::..x..:.::..:..:::.:x:...x.x:::....---------x.......::.::...x:.:.:.....:.x...:..:.. 68M1D57M9I39M 99/164 60.4% 173/94230402 0.0% 10/164 6.1% 130078718 60135837 +4191 chr4 + 190214555 164884021 164884020 164884253 233 AAGAAAGAGAAGGGAAGAAAAAAG------------GAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGA--AAGAAAGGAGAGAAGAAAGAAACAAAGAGAGAGGGAAAGAAGAAAGA-----AAAAGAGGAAGGAAGAGAAGGAAAGAAAGAAGAGTTCC chr4 + 94230402 67346720 67346719 67346971 67346720 67346719 67346971 252 AAGGTAAAGACAGGGAGAAACAAGCCAACGTGTATGGCAGGAATGAGGCAAATGAAACAGATGTTAGAGGGAAACAGAGGGAAGGATAGATGGCAAAGGGGGAACTGGGAAAGAAGCACAGAGTCAGGAAAGGAACAAGCAGTAAAGAAAGGAGAGGGAAATAAGTATATCAGGCAGAAAAAGACAAAGAGAGGGAGCTGGTATAATGAGCTACAAAAAAGAAAAAGAAATGTGGCAATAGTTTAGAGTCCC ...:x.:...x:..:.....x...------------.x.:...x..::..::x:..:x..:x.xx.:..::.:.x:..:::..:..x...x:.x.x::::.:..xx::......::x.x.:..xx..:..:::.:x...x.:x............:.::.--...x.x:xx::.x.....:.:..........:.:.xx:.x.x..x..-----....:..:..:::.:.x:x..x..x.:xxx.....:.. 24M12I124M2I47M5I38M 134/233 57.5% 252/94230402 0.0% 19/233 8.2% 97537301 92677254 +3216 chr4 + 190214555 164884064 164884063 164884143 80 AGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 86089083 86089082 86089162 86089083 86089082 86089162 80 AGGAGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAG ..:..:..:....:.:x.x...:......:...:.....xx.:::...x...x:.:.:...:...x..x..:::x.:... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 78794981 NA +3300 chr4 + 190214555 164884148 164884147 164884244 97 AAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAG---AAAGAAACAAAGAGAGAGGGAAAGAAGAAAGAAAAAGAGGAAGGAAGAGAAGGAAAGAAAG chr4 + 94230402 15855381 15855380 15855480 15855381 15855380 15855480 100 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG .....:...:.:.x.:.x.::..::.xxx:..x...---.::....x.xxx......:..:..........::..:....x:.:.:....x....:.::. 36M3I61M 63/97 64.9% 100/94230402 0.0% 3/97 3.1% 149028767 41185788 +3813 chr4 + 190214555 164894189 164894188 164894267 79 GTGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCAGGAAGTGAAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.....--....:.:...........::........x.xx.x...x..:..........:.:x.xx:..:...:. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 88860988 NA +3131 chr4 + 190214555 164894369 164894368 164894440 72 TACAAAACACACACATATATATTTTTTCTTTTCTTTTCTTCTTTATTTTTTTATTTTTTTATTTTTTTGAGA chr4 + 94230402 52818464 52818463 52818535 52818464 52818463 52818535 72 TACAAAAGATACATATAGATGTTCTCAAATTTCTTTTTTTTTTCATTTTTTTTATCTAATACTGTTTTGAAA .......x.:...:...x..:..:.:xxx........:..:..:........xx.:.xx..:.x......:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 112075905 78138650 +3217 chr4 + 190214555 164899570 164899569 164899664 95 ACAAAGCAAGACTCTGTCAAGAAAGAGAAAGAAAGAAAGAAAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 + 94230402 70338940 70338939 70339031 70338940 70338939 70339031 92 ACAAAG--GGGCTCT-TTGGGAAGGGGAAAAAAAGAAAGAAACGAGAGGAGAAAGAGGGGGGGTGGGGGGGGTGGCGGGGTGGGGAGAGTGAAAG ......--:.:....-.:::...:.:....:...........x:::::.:..::.....:...x.:.:.:.:x:.x.:.:x:.:.....x..:.. 6M2D7M1D79M 59/92 64.1% 92/94230402 0.0% 3/92 3.3% 94560630 NA +3568 chr4 + 190214555 164899609 164899608 164899706 98 AAAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGA chr4 + 94230402 15855381 15855380 15855477 15855381 15855380 15855477 97 AAAGAGAGAGAAGTGGACA-AGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAA ..........:::x...x:-..::...xxx:..x.::xx:..:..:...xxx...........:........:::....:.x.:.......x....:. 19M1D78M 65/97 67.0% 97/94230402 0.0% 1/97 1.0% 149044228 41170327 +3551 chr4 + 190214555 164899637 164899636 164899804 168 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA---AGAAAAAGAAGGAAAGGAAGAGGGAAAGAAAAGAAAAATAGTTAAACCATGTTAGAGTCTTTGGCA chr4 + 94230402 51148379 51148378 51148547 51148379 51148378 51148547 169 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGGCGTCAT--CCAAACCACAGCAGAGGCCTGAGCA ...:...:::..xx.x...............:.....x::...xxx::..xx:...x::.:x.x.:.:.:x:...:.:...:..:..:..:..::..x..x.---x...:x.x:.:.:....:..x.x.xx:.::.:.x:xx..--::......::x:....x.:.x:... 102M3I39M2D25M 96/166 57.8% 169/94230402 0.0% 5/166 3.0% 113751258 76463297 +3177 chr4 + 190214555 164899696 164899695 164899783 88 AGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAGGAAAGGAAGAGGGAAAGAAAAGAAAAATAGTTAA chr4 + 94230402 75241514 75241513 75241601 75241514 75241513 75241601 88 AAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAAGTGGTCAA .:.x..:..xx.x...x.........:..:..........:...x.::.xx.::.....x..:.x:x..:.:.x.:x:..:.:..:.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 89658182 NA +3635 chr4 + 190214555 164901785 164901784 164901882 98 CATGGTTGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG----TGA-GCCAAGCTAACG chr4 + 94230402 76033197 76033196 76033297 76033197 76033196 76033297 101 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG ..::..x.:...:.--....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:..----...-.......x:.:. 14M2D67M4I3M1I12M 70/96 72.9% 101/94230402 0.0% 7/96 7.3% 88868588 NA +3265 chr4 + 190214555 164918478 164918477 164918554 77 GTTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGTTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x....x......:...........::........x.xx.x...xx:.x.......:.:..x.xx:.x:..:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 88885277 NA +3189 chr4 + 190214555 164935193 164935192 164935270 78 ATTCTTTTTCTTTTTCTTTTTCTTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTGAAA--------------CAAAGTCACATTATG chr4 + 94230402 63990402 63990401 63990493 63990402 63990401 63990493 92 ACTCATTTTCTCTTTCTTATTCTTTTTTTTTCTTCTATCTTCCTTCTTGTAGTTGTCTTGAAAGTGAATGGTAATCCCAAAGCTATACTATG .:..x......:......x.......:...::....x.:..::..:..x.xx..x.:......--------------.....::.:.:.... 63M14I15M 57/78 73.1% 92/94230402 0.0% 14/78 17.9% 100944791 89269764 +3025 chr4 + 190214555 164935195 164935194 164935259 65 TCTTTTTCTTTTTCTTTTTCTTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTGAAACAAA chr4 + 94230402 56805116 56805115 56805180 56805116 56805115 56805180 65 TCTACTCCTTAATTTTCTACTCCACTGTCTATTTCTTTTTCTTTTCTTTTTTTTTTCAGAACAAA ...x:.:...xx.:..:.x..::x..x...x.:.......:....:..........:::...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 108130079 82084476 +3350 chr4 + 190214555 164953784 164953783 164953857 74 GTGTGCCTGCAGTCCTAGCTATTTGGAAGGTTGAGGCTGGAGGATTGCTTGAGCCCAGGAGTTCCAGGTTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x..:...:.:.....:...:....:....x.:x.x.:.x::.....:.....:..:.:::..:.::.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 88920580 NA +3061 chr4 + 190214555 164961002 164961001 164961066 65 ACACATGTCTGGTTTTTACAAAAGAAACAAAAAACAAAAATCAAAATATAAGGCA-----CACAAAAAGA chr4 + 94230402 60474926 60474925 60474995 60474926 60474925 60474995 70 ATACATATCTGGTTTTCTCAGGAAAAATAAAAAAAAAAAATCCAAATAGAAAAAAAAAATCATAAAGAGA .:....:.........:x..::.:...:......x.......x.....x..::x.-----..:...:... 55M5I10M 49/65 75.4% 70/94230402 0.0% 5/65 7.7% 104486076 85728479 +3017 chr4 + 190214555 164961130 164961129 164961186 57 GACAGAAAATAAGAACTCTCAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 27737187 27737186 27737243 27737187 27737186 27737243 57 GAAAGAAAATAAGAACTTTCAGGAAAAAATAAATAAAAACAAGGTAAGAGGGGAAAA ..x..............:.....x.....x...x.....x..::x..:.::::.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 137223943 52990612 +3055 chr4 + 190214555 164961178 164961177 164961235 58 AAAAAAAAAAAAAAAAGAAAGAAAAATAACAATAATTGATATGTTAAAGGCTTTGGCA chr4 + 94230402 57340709 57340708 57340766 57340709 57340708 57340766 58 AAAAAAAAAAAAAAAAGTGTAAAAAACAAATCTTATGAATACGTTAAAGGATTTGGCA .................x:x:.....:..xxx.x..x:...:........x....... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 107620469 82594086 +3796 chr4 + 190214555 164963613 164963612 164963686 74 GTGCACCTGTAATCCCAGCTATTTGGGAGGCTGAGATGGGAGAATCGCTTGAACCCAGTAGGCAGGGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.......:...::........x:xx.x...x.:...........x..x:xx...:..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 88930409 NA +3165 chr4 + 190214555 164964212 164964211 164964277 66 GTGGTGGGCGCATGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--.:.:......:...........::........x.xx.x...xx:.x.......:.:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 88931011 NA +3196 chr4 + 190214555 164968016 164968015 164968094 79 GTGGTACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGAAGAATAGCTTGAACCTGGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:...:--....:.:...........::........x.:x:x...xx:........::.:..x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 88934815 NA +3184 chr4 + 190214555 164982619 164982618 164982708 90 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTTTGGAGAATCACTTCAACCCGGGAGGCGGAGATTGCATTGAGCTG----AGATTATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA----------GCTTTGGGCTGTAGAACATGATGCCA .::.x....:.:...........::........:::x.x...x.....x.....:.:.----------..x...:....----.x..x...... 58M10D11M4I11M 60/80 75.0% 84/94230402 0.0% 14/80 17.5% 88949413 NA +3233 chr4 + 190214555 164983779 164983778 164983857 79 GTGGCACACGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATTGCCTGAACCCAGGAGGCAGAGGTTGGAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--....:.:...........::.:......x.xx.x...x::.:.........:..x:xx:..:..x.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 88950578 NA +3115 chr4 + 190214555 164986274 164986273 164986362 89 CACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAAGAGAATTGCTTGAACCCAGGGGGTGGAGGTTTCAGTGAGACAAGATCATGCCA chr4 + 94230402 76033207 76033206 76033289 76033207 76033206 76033289 83 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...x......:.........::::.......:x.xx.x...x::...........::.x.xx:..:.x:..------..x..x...... 71M6D12M 58/83 69.9% 83/94230402 0.0% 6/83 7.2% 88953067 NA +3596 chr4 + 190214555 164992604 164992603 164992681 78 AGTGGTGCGCCTGTATTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.x....x.:.........::::........x.xx:x...x.:...........:..x.xx:.x:..:.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 88959404 NA +3251 chr4 + 190214555 165011902 165011901 165011993 92 ATTTAGCATCCATAAGTTT-TATAAAGTACTTTTATAAGTTTAGTCTTCTCATTTTGTTTTATCTTATTTTCAAAAATTATTTTGTTTCAATA chr4 + 94230402 60657944 60657943 60658031 60657944 60657943 60658031 88 ATTTTTTATCCAGAAATTTAGACAAACGGGTTTT-----TTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTTCAAAAATAATTTTGTTACCATA ....xx:.....x..:...-x.:...xx:x....-----...:..:..:.xx.........:.:..:...........x........x.x... 19M1I14M5D54M 65/87 74.7% 88/94230402 0.0% 6/87 6.9% 104353958 85860597 +3173 chr4 + 190214555 165015072 165015071 165015172 101 CTTTAATTCCAAATATATATGTGTGTGTCTATATATATATATATATATATATATATATATATATATATATATATGTTT-------TCTTATTCTCTTCTCTGAGTAGA chr4 + 94230402 7572247 7572246 7572353 7572247 7572246 7572353 107 CTTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATATTTCAGTA-GTGTTTAGGCAAAACTTATTTTTTTCCTATAGCAGA ...:...xx..x...x.:......:...:.x.x:...x:..x....:.....:....x......x.xx:..-:.....-------x......:.:...::xx..:... 71M1D6M7I23M 70/100 70.0% 107/94230402 0.0% 8/100 8.0% 157442825 32771730 +3058 chr4 + 190214555 165015940 165015939 165015998 59 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x......:...........::........x.xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 88982734 NA +3175 chr4 + 190214555 165023826 165023825 165023913 88 GTGGTAGGCGCCTGTAATCCCAGCTACTCAAGAGGCTGTGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGCTGCA----ATGA-GCCAAG chr4 + 94230402 76033201 76033200 76033291 76033201 76033200 76033291 91 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG .....--..:.x....:.:.........::.:......x.x.xx.x...x::...........:..x:xx:.....:.----....-...... 5M2D71M4I4M1I6M 64/86 74.4% 91/94230402 0.0% 7/86 8.1% 88990625 NA +3072 chr4 + 190214555 165024643 165024642 165024718 76 CGCCATGTTAATTTTTCCTACCTTACCTCTCTTCTAAATTATACAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 77656619 77656618 77656694 77656619 77656618 77656694 76 CATCATTATCACTCTTCTTTCAGTATCTCTTTCCTAAGCTGCAAAATACTCCTTTAGTTTTTTTTTTTTTTTTTTT .::...xx.x.:.:...:.x.xx..:....:.:....::.::.x.:.x..::...xx................... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 87368024 NA +3086 chr4 + 190214555 165036876 165036875 165036919 44 TGTCTCAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAGACTGG chr4 + 94230402 76323133 76323132 76323176 76323133 76323132 76323176 44 TGTTTTACAAAAACAAAAAAAGAAAAAAGAAAAAACAAGACCGG ...:.:.x.....x.....................x.....:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 88713743 NA +3033 chr4 + 190214555 165046297 165046296 165046342 46 TTTGCACTGAATAAACTTACAGCCAAAAAAAAAAAAAAAAAAAGGA chr4 + 94230402 80601077 80601076 80601122 80601077 80601076 80601122 46 TTTGCCCCAAATTACTTCGCAGCCAAAAAAAAAAAAAAAAAAAGGA .....x.::...x.x:.::........................... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 84445220 NA +3121 chr4 + 190214555 165047896 165047895 165047943 48 AAAACAAACAAACAAACAACAACAAAAAAAACACTCAGGACACCTAGT chr4 + 94230402 15359737 15359736 15359784 15359737 15359736 15359784 48 AAAAAAAACAAACAAACAACAAAAAAAAAAACACTGAATGTATCTAGT ....x.................x............x.:x::.:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 149688159 40526396 +3561 chr4 + 190214555 165050339 165050338 165050412 74 GTGCACCTGTAGTCCCAGCTACTCAGGTGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGGTAGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::x.......x.xx.x.:.x.......:.....:..x.xx:.:...:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 89017135 NA +3457 chr4 + 190214555 165061792 165061791 165061874 83 TTAATTTATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 + 94230402 77957766 77957765 77957848 77957766 77957765 77957848 83 TTCAGCTATGCTTATTTTTATGTATGTGTTTATATATATGTATGTAAAGTATTATATATAACAAGATGTTTTTTTTTTTTTTT ..x.x:...::x...x.x.:...:.....x.........:...:..x.xxxx........xxx.x..:............... 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% 87104026 NA +3141 chr4 + 190214555 165061802 165061801 165061872 71 TATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 + 94230402 77957778 77957777 77957848 77957778 77957777 77957848 71 TATTTTTATGTATGTGTTTATATATATGTATGTAAAGTATTATATATAACAAGATGTTTTTTTTTTTTTTT ...x.x.:...:.....x.........:...:..x.xxxx........xxx.x..:.x............. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 87104024 NA +3206 chr4 + 190214555 165061804 165061803 165061877 74 TATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 34522012 34522011 34522085 34522012 34522011 34522085 74 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT .:.........:............:.:.x.x.xx.xx..:......x..:.:.x.xx....x.x..x....... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 130539792 59674763 +3420 chr4 + 190214555 165061806 165061805 165061879 74 TGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34522012 34522011 34522085 34522012 34522011 34522085 74 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT ...........:...:........:.:.x.x.xx.xx..:......x..:.:.x..x....x.x..x....... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 130539794 59674761 +3503 chr4 + 190214555 165061808 165061807 165061881 74 TGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34522012 34522011 34522085 34522012 34522011 34522085 74 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT ...........:.:.:........:.:.x.x.xx.xx..:......x..:.:....x....x.x..x....... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 130539796 59674759 +3542 chr4 + 190214555 165061810 165061809 165061883 74 TGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34522012 34522011 34522085 34522012 34522011 34522085 74 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTT .............:.:........:.:.x.x.xx.xx..:......x..:.x....x....x.x..x....... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 130539798 59674757 +3952 chr4 + 190214555 165061812 165061811 165061893 82 TGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTAAATAGAG chr4 + 94230402 34522012 34522011 34522093 34522012 34522011 34522093 82 TGTGTGTGTGTATGTGTATATATACACAGAAAATTTGATGTATATAGATGTGTTTTGTTTTATGTTGTTTTTTTAAACAGAG .........:...:.:........:.:.x.x.xx.xx..:......x..x.x....x....x.x..x..........:.... 82M 62/82 75.6% 82/94230402 0.0% 0/82 0.0% 130539800 59674755 +3232 chr4 + 190214555 165061818 165061817 165061883 66 TGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT .::...:.........:.:......x.:.:x.x..x.xx.x...:...x..:.............. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 157238554 32976001 +3231 chr4 + 190214555 165061820 165061819 165061886 67 TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 7823264 7823263 7823330 7823264 7823263 7823330 67 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTA ..:...:.........:.:......x.:.:x.x..x.xx.xx..:...x..:............... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 157238556 32975999 +3127 chr4 + 190214555 165061828 165061827 165061894 67 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTAAATAGAGA chr4 + 94230402 33251003 33251002 33251069 33251003 33251002 33251069 67 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAA .:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x......x.xx...:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 131810825 58403730 +3017 chr4 + 190214555 165061839 165061838 165061877 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 140269213 49945342 +3319 chr4 + 190214555 165063416 165063415 165063484 69 CTATATATACATGTGTATATACATATATATGTATATACACACACACACATATATATATATACATATACA chr4 + 94230402 61270773 61270772 61270841 61270773 61270772 61270841 69 CCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA .:..:x...:..x........::......:.:.::......x....x...:....x:..:...xx.:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 103792643 86421912 +3100 chr4 + 190214555 165063423 165063422 165063475 53 TACATGTGTATATACATATATATGTATATACACACACACACATATATATATAT chr4 + 94230402 12852055 12852054 12852107 12852055 12852054 12852107 53 TACAAATCTGTAAACGCATATATGTATGCACACTCACACACATATATATTTAT ....x:.x.:..x..::..........::....x...............x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 152211368 38003187 +3007 chr4 + 190214555 165063434 165063433 165063493 60 ATACATATATATGTATATACACACACACACATATATATATATACATATACACTTTTTTCT chr4 + 94230402 64054809 64054808 64054868 64054809 64054808 64054868 60 ATACTTGTATGTGTTTACACGCATACACACATTTATATACATGTATATTTACCTGTCTTT ....x.:...:...x..:..:..:........x......:..::....x:..:.x.:.:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 101008625 89205930 +3192 chr4 + 190214555 165063462 165063461 165063516 55 ACATATATATATATACATATACACTTTTTTCTTTTTTTTTTTTCTTTTTTTAGTC chr4 + 94230402 56167944 56167943 56167998 56167944 56167943 56167998 55 ATATATATATATATACATTTACACTTGTTACTTTGTCCTTTTTCACATTTTGGTC .:................x.......x..x....x.::......x:x....:... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 108895518 81319037 +3026 chr4 + 190214555 165069418 165069417 165069464 47 ATCTGTTTTCTTTTTTTTTTTTTTCCTTTTTTCTTTTTTTTTTTTTT chr4 + 94230402 21583801 21583800 21583847 21583801 21583800 21583847 47 ATCTGTTTTACTTTTTTTTTTTTTCCAGTTTAACTTTTTTTTTTTTT .........x:...............xx...xx:............. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 143485617 46728938 +3244 chr4 + 190214555 165075890 165075889 165075977 88 TAAAAAATAGTGGCATGCATCTGTAGTACTAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGTAGAAGGAGGTTGCAG chr4 + 94230402 76033192 76033191 76033277 76033192 76033191 76033277 86 TGATACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.x.x.:.....--....:x......x.:.........::........x.xx.x...x::.........:.x..xxxx:..:..:.. 13M2D73M 60/86 69.8% 86/94230402 0.0% 2/86 2.3% 89042698 NA +5671 chr4 + 190214555 165079692 165079691 165079843 152 GAAGTGAGAGCCAACAATCGCTTACTCAGCAGCGCATTGTGTCGCTTCAGGTATTCAATGGTGTCTCCTTGCTTTTCAACAATTTCTTCTAGGCTTGAA----------------------------ATAGTTCTGCAAGTAATCA----------AGATATAAATGGGTTACACATATTCACCAATACT chr4 + 94230402 24882060 24882059 24882249 24882060 24882059 24882249 190 GATGTTAGTGCCAATAGTCTCTTGCTGAGCAGTGCATTGTGTCGTTGAAGATATTCTATTACATCTCCTTGCTTCTCAACTATCTCTTCTAAACTTGAATTTTCCCTTGAAAGAAAAAAGTGAATACACATTCCCATAAGAGATAACAGCTTTCTGACATATGAAAGGTCAGCACATGTTAACCAATACT ..x..x..x.....:.:..x...:..x.....:...........:.xx..:.....x..x:::...........:.....x..:.......::......----------------------------.:.x.:.:::...x:..x.----------.x....:..x..x:x:.....:..x......... 99M28I19M10I34M 111/152 73.0% 190/94230402 0.0% 38/152 25.0% 140197632 50016923 +6578 chr4 + 190214555 165085577 165085576 165085697 121 AAATCTTACCTGAATCCAGTCTCCGAGGTAATATTGCTGGGGTAAGCATAGATTTTTTCTTCTTCAAGTATATCAGGCTCTGGTTTAGCTTTATTAAATCTCCGGATTTTCACTAAAATAA chr4 + 94230402 24884398 24884397 24884518 24884398 24884397 24884518 121 AAATATTACCCAAATCCAACTTCTGAGGTAATGTGACTAGGGTAAGCATACATCTTTTCTTCTTCAATTATGTCAGGTCTTGGCTTCGCACGATTGAAGTTACTTATTTTCACTAAAAGAA ....x.....::......:::..:........:.x:..:...........x..:.............x...:.....:::...:..x..x:x...:..x:.x.xx.............x.. 121M 91/121 75.2% 121/94230402 0.0% 0/121 0.0% 140201179 50013376 +3318 chr4 + 190214555 165090087 165090086 165090153 67 TGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.........::........x.xx.x...x...........:.:..x.xx:..:..::. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 89056876 NA +16536 chr4 + 190214555 165100609 165100608 165100940 332 GAGAGAAAATTGGACATACCAGAGGACTGTATCATCAACGCAAGTCTCTTGAGATGCCTTGTTGATCGGTAGATCAAGTTATAGCCTCGGTTTCTGATTTTGCTGTGGTGATACTGGATGTAGCATTCAAGGAGTAAATGGAGAATCCACAAAATAACTTTCCCAAGGATTATAACCGTCTGAACTTTCAATGGGTTTGTGTAATTTCCTGGGCACTTGTCCTCATTTGGATTAGGATAAGAACAAAGCACACCTGTTAAAAATGCTAAAACAACAAACACGAGCTGGGGGAAAGGAGAGCAGAAAGATTAATATTCAATATTTGTAATTAG chr4 + 94230402 24890769 24890768 24891097 24890769 24890768 24891097 329 GAAAAAAAGTTCACTTCACCTGCAGAATGTATCATCAACGGAAGCCTCTTGAGATGCCTTGTTGATCGATATATTAAGAAGTAGCCTCTGCTTCTGATTCTTCTGTGGTGGTGGTGGACATAGCATTCAAAAAACACATGCAGAATCCACAGAATTACTTTTGCAATTATTATGACAGTCTGTACTTTAAATGGGTGAGTATAGTTTCCAGGGCATTTATCCTGATTTGGATTGGGGTAAGAACAAAACATGGCTGCTAAAAATGCTAGAACAACAAAAGCAACCTGAAAGA---GAAACAAAAAAGGAGAAAACCCAAAGTCAGCAGTCAG ..:.:...:..x:x:x:...x.x:..x.............x...:.......................:..x..:...xx:.......x.:........:.x........:.:x....::..........::.::.x...x..........:...x.....:x...xx.....:..x.....x.....x.......xx..:..:.....x.....:..:....x.........:..:..........:..::x...:...........:.........x:.:.x...:::..---..:.xx.:....:xx..x.::...x:.:x.:.:.:.. 292M3D37M 243/329 73.9% 329/94230402 0.0% 3/329 0.9% 140209840 50004715 +5539 chr4 + 190214555 165102943 165102942 165103112 170 AACTTACATGAATAAACCACAGAAGATTCACTATGATGACTGTAGGAAGAGGATGGAATCGGGGTCTAAAGTGAGCTTGTAATGAGTGGTGTGGGAGAAGCTGGGCATCCAGAAGTGGGTCGTCTTCAATACTCTGGGTGATATCCAAGGAACCCTGGGGTGCAGAAAAA chr4 + 94230402 24898229 24898228 24898398 24898229 24898228 24898398 170 AACTTACATGCAGTAGCAACAGAAAATTGGCAAGAAGAACTACTGGGATAGCATGAAATCTTGGCCTTAGTTGAGAATACAGTGTATGAGACGAAGTAAGTGGTGCATCCAACAGAGCTTCATCTTCTAAACTCTGTGTTATTTCCAAGGAGCCCTGGAGCAGAGGAAGA ..........x.xx.:.x......:...x:.x.x:.x:...::x..:.x..x...:....xx..:..x.:x....xx.::.:..x:..:x::.:::x...:x.x.......:x..x.xx..:.....x.x......x..x..x........:......:.::x..:..:. 170M 108/170 63.5% 170/94230402 0.0% 0/170 0.0% 140204714 50009841 +3569 chr4 + 190214555 165110569 165110568 165110647 79 GTGGTGCATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:.......:...::........x.xx:x...x...........:.:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 89077368 NA +3252 chr4 + 190214555 165116681 165116680 165116751 71 CATGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGTTTGAACCCAGAAGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::....--...:.x....:.:.........::::........x.xx.x...xx::.............. 8M2D61M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% 89083484 NA +3003 chr4 + 190214555 165121716 165121715 165121782 67 CAAAAAAAGAAAGAAAGAAAAGAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGGAAAGGAAAGGAAA chr4 + 94230402 66803528 66803527 66803594 66803528 66803527 66803594 67 CAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGAGAGAACAGGACACAAAA ..:.:.......:...:.:.........:.::::.:.x.:x..:x..:.....:.x....x.x:... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 98318188 91896367 +3239 chr4 + 190214555 165121719 165121718 165121813 95 AAAAAGAAAGAAAGAAAAGAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGGAAAGGAAAGGAAAAAGAAAAAGAAAAAAAAAGAAATGGTGCTGA chr4 + 94230402 1317378 1317377 1317472 1317378 1317377 1317472 95 AAGGATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAATGAGAAGTGGAAATGA ..::.x::.......xxxx..:.x..x.::.x.::.xx....:....::.:.........::........x..xx....x:....:...x:x... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% 163804341 26410214 +3453 chr4 + 190214555 165135389 165135388 165135460 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTGAACCCAAGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x.:.x::..........::..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 89102183 NA +3635 chr4 + 190214555 165139523 165139522 165139596 74 GTGTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.::..........::........x.xx.x...x.............:..x.xx:.::..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 89106319 NA +3594 chr4 + 190214555 165158183 165158182 165158254 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCCACAGAATCAATTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x..xxx...x..x..........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 89124977 NA +3072 chr4 + 190214555 165160066 165160065 165160120 55 GTAGTTCTGACTACTGTTTTTGTTTGTTTGTTTGTTTGTTTTTTTGTTTTTTTTT chr4 + 94230402 69953340 69953339 69953394 69953340 69953339 69953394 55 GCAGTTTTGATTGTTTTCTTTGTTTGTTTGTTTGTTTTTTCCTCCATTCTTCTTT .:....:...:.::.x.:...................x..::.:::..:..:... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 95206726 NA +3144 chr4 + 190214555 165174676 165174675 165174733 58 AAGAGTAAGCATTCTTTTCTAATTCTTTTTTTTTTTTTTTTTTAAGAGACAGGGTCTC chr4 + 94230402 31323291 31323290 31323348 31323291 31323290 31323348 58 AAGAAGAATCCTGCCCTTCCATTTCTTTTTTTTTTTTTTTTTTAGGAAACATGATTTC ....:x..x.x.x.::...:.x......................:..:...x.:.:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 133851385 56363170 +3027 chr4 + 190214555 165174695 165174694 165174746 52 TAATTCTTTTTTTTTTTTTTTTTTAAGAGACAGGGTCTCATTGTGTTGCCCA chr4 + 94230402 21966696 21966695 21966747 21966696 21966695 21966747 52 TAATTCTTCTTTTTTTTTTTTTTTAAAGAACAGTAACTCAGTGACTTGCCTA ........:.................:::....x:x....x..xx.....:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 143207999 47006556 +3070 chr4 + 190214555 165181243 165181242 165181318 76 TCCAGCCTGGGTGAGGGAGTGAAATTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATGATCAAATTTT chr4 + 94230402 59351530 59351529 59351605 59351530 59351529 59351605 76 TCCAGGTTTGTAGAGAGATTCTACTTCTGTTTGGAAGAAGGAAAAAAAAAAAAAGAAAAGCAAATGAACACCTTTT .....x:.x.xx...:..x.xx.x...::.:.x:..:..::.............:.....x......x..xx.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 105829713 84384842 +3170 chr4 + 190214555 165195812 165195811 165195893 82 CATGGTTGTGGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGACAGAGGTTGCA chr4 + 94230402 76033197 76033196 76033276 76033197 76033196 76033276 80 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..::..x...x.:.--....:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:. 14M2D66M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 89162615 NA +9681 chr4 + 190214555 165219886 165219885 165220083 198 TCTTTAATAAGATCTTTTTCTGTTTTTG---TTCTTTTCTTTTATGTACAGATGCACAAAGCAGGGTCATCAGAAGCCTCTCGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTCAAAGTCATGAACGAATTAAGAAGGTATCATTATACTA-ATGTACATGC chr4 + 94230402 24911925 24911924 24912125 24911925 24911924 24912125 201 TTTTCAAAAACtttttttttaaatcttaactttttttttttttat-tCCAGATGCACCAAACTTTGCCATCAGAAGCCTTTGGATTTGAAAGATGATAACACTGAAATTCACTGTCCTGTTACAGTGAATCCATGGCACATGAAGAAAGCTTTTAAAGTTATGAATGAGTTAAGAAGGTATTAATTCACTGTATACACCTGC .:..:..x..xx.:.....:x:x.:..:---..:....:......-.x.........x..:.xxx.:............:.x....::...........:..:....xx.....:..x..x...........x.....:..............:.....:.....:..:............:.x.x:...:-..::..x... 28M3I14M1D145M1I10M 151/197 76.6% 201/94230402 0.0% 5/197 2.5% 140307961 49906594 +9023 chr4 + 190214555 165228785 165228784 165228930 146 TTTCTCTCTGCTTTTTACACAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTATGAAATATTTTAGT chr4 + 94230402 24916496 24916495 24916641 24916496 24916495 24916641 146 TTTCTCTGATATTTCTAAATAGTCAAAACTTGCTGTGTGATGTGACGATAGTAGCTGAAGACATGGAAATTGCAGCGCACAGAGTTGTGCTAGCCGCCTGCAGCCCCTACTTCCATGCCATGTTTACAGGTACCAAATGTTTCAGT .......xxxx...:..x.:........:........:.....x..:..x..:..x...............x.x..x..:.....x.....:........:..:..:..:..:...................:x....:...:... 146M 117/146 80.1% 146/94230402 0.0% 0/146 0.0% 140312289 49902266 +10205 chr4 + 190214555 165238772 165238771 165238905 134 TTTTAGGTGAGATGAGTGAGAGCCGAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCAGAAATTCAGGTTACAGAAGAAAATGTACAGGTAAGA chr4 + 94230402 24921311 24921310 24921444 24921311 24921310 24921444 134 TTGTAGGTGAGATGAGTGAAAGCCGAGCAAAGAGAATTCGAATAAAGGAAGTTGATGGCTGGACCCTAAGAATACTTATTGACTATATTTACACTGCTGAAATTCAAGTTACAGAAGAAAATGTGCAGGTAAGA ..x................:...............:..x.......:..:..x..............:..:..:..x.....:...:..........x........:.................:......... 134M 118/134 88.1% 134/94230402 0.0% 0/134 0.0% 140317461 49897094 +3562 chr4 + 190214555 165247381 165247380 165247459 79 GCTGGCTGAAGGGGATGAT----GAGTTTAAGGGTGTTTTTGTTTGTTTGTTTTGTTTTGTTTTTT-GATGGGTAATATTTTAA chr4 + 94230402 39834446 39834445 39834529 39834446 39834445 39834529 84 GTTTGCTGAAGGGGAAGGTTTTTGTGTTGTTGGGTTTTTTTGTTTGTTTGTTTTGCTTTGCTTTTTAGATATGAAATGCTTCAA .:.x...........x.:.----.x...xxx....x...................:....:.....-...:x.x...::..:.. 19M4I43M1I17M 62/79 78.5% 84/94230402 0.0% 5/79 6.3% 125412935 64801620 +3035 chr4 + 190214555 165247393 165247392 165247442 50 GGATGATGAGTTTAAGGGTGTTTTTGTTTGTTTGTTTTGTTTTGTTTTTT chr4 + 94230402 86593712 86593711 86593761 86593712 86593711 86593761 50 GGATTAGTAGTTTTCAAGGGTTTTTGTTTGTTTGTTTTGCTTTGTTTTTT ....x.xx.....xx::.x....................:.......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 78653681 NA +13454 chr4 + 190214555 165263191 165263190 165263365 175 TTGCAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAAGAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATATGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGGCAAGT chr4 + 94230402 24945737 24945736 24945911 24945737 24945736 24945911 175 TTACAGGTGCTGCTTCCAGCAGCTGGTCTCTTGCAACTGCAGGATGTGAAAAGGACTTGCTGTGAATTTTTGGAATCCCAGCTTCATCCTGTCAACTGCTTGGGAATTCGTGCTTTTGCTGACATGCATGCATGCACGGATCTATTGAACAAGGCCAACACATATGCAGGCAAGT ..:.....:..x..:.................:..::.:...........:.:......:..........................:..............:.....:..x...........:...........:..x..:..x:................x............. 175M 153/175 87.4% 175/94230402 0.0% 0/175 0.0% 140317454 49897101 +3678 chr4 + 190214555 165264541 165264540 165264620 80 AAGACA--TTATTTCTTTCTTTTTTTATGGCAGAGTAGTATTCCATCATATATATATATATATATATACACACACACACGTA chr4 + 94230402 41650551 41650550 41650628 41650551 41650550 41650628 78 AAGACAACTTATTTTTCACCTTGTTT----TAGCCTTACATTTCATTAAACATATATATATATATATACACACACACACGTA ......--......:.:x.:..x...----:..xx.x::...:...:.x.:............................... 6M2I18M4D52M 61/76 80.3% 78/94230402 0.0% 6/76 7.9% 123613990 66600565 +3919 chr4 + 190214555 165264624 165264623 165264743 120 ATATACACGTATATATGTACACACATGTATATACATATATGTCTACA----TACGTATATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTAT chr4 + 94230402 68837027 68837026 68837150 68837027 68837026 68837150 124 ATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT ..:.::.::..:...::....:..x.::.:.:...:::.x.x.:.x:----..x..x:xx...x.x::.....:.............:.:.:.x...:.......:.:..::.:.:..x.x... 47M4I73M 75/120 62.5% 124/94230402 0.0% 4/120 3.3% 96427597 93786958 +3182 chr4 + 190214555 165264658 165264657 165264710 53 ATATATGTCTACATACGTATATGTATGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA ......::x............x:.:.......x...........x..x.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 158407048 31807507 +3466 chr4 + 190214555 165264670 165264669 165264749 80 ATACGTATATGTATGTGTGTGTGTGTGTGTGT--GTGTATATATATATATATACATATATATATATATATATGTATATATAT chr4 + 94230402 85834534 85834533 85834615 85834534 85834533 85834615 82 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x.:.x.:...x.................:.--:....x::...:....:..x...:..:.x...::.:.::..:.:.:.. 32M2I48M 56/80 70.0% 82/94230402 0.0% 2/80 2.5% 79430136 NA +3507 chr4 + 190214555 165264671 165264670 165264753 83 TACGTATATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:x:..x...:.x.................:.xx..:..x::...:...::..x...:..:.x...::::.:...:.:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 79430138 NA +3319 chr4 + 190214555 165264675 165264674 165264745 71 TATATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATAT----ATATACATATATATATATATATATGTATAT chr4 + 94230402 39937175 39937174 39937249 39937175 39937174 39937249 75 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT .....:.........::...x......::xxx.x..:...:----...:.....:.......:...x....::.. 41M4I30M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% 125327500 64887055 +3995 chr4 + 190214555 165264675 165264674 165264757 83 TATATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x...................xx..:..x::........:..x...:..:.x.:.::.:.:...:.:.:.. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 79430142 NA +3882 chr4 + 190214555 165264677 165264676 165264759 83 TATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x...............:...xx..:..x::.:.:....:..x...:..:.x...::.:.:...:.:.:.. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 79430144 NA +3754 chr4 + 190214555 165264678 165264677 165264755 78 ATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x.:...x.................:.xx..:..x::...:.:..:..x...:..:.x....:.:.:...:.:.:.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 79430140 NA +3280 chr4 + 190214555 165264679 165264678 165264745 67 TGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATA--TATATATATATATATGTATAT chr4 + 94230402 70094142 70094141 70094210 70094142 70094141 70094210 69 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ....x:.:.......x...x...x.....:.....:......x.:.--.x:...x.........:.:.. 46M2I21M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 95170537 NA +3389 chr4 + 190214555 165264683 165264682 165264768 86 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATATATATATATAAA chr4 + 94230402 79265520 79265519 79265604 79265520 79265519 79265604 85 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-ACACCTCTATATAAA ............::........xx.:......:...:..:.:.::.:.:::.x.:..:.x.:.:.x:.:.-.:.:x.x........ 70M1D15M 57/85 67.1% 85/94230402 0.0% 1/85 1.2% 85999163 NA +3930 chr4 + 190214555 165264687 165264686 165264761 75 TGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.............:.:...xx..:..x:....:....:..x...:....x...::.:.:...:.:.:.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 79430146 NA +3089 chr4 + 190214555 165274485 165274484 165274538 54 TGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGTGAATGGCCTGAACCCGGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:.......:...::........x.xx.....xx:.:.......:.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 89241274 NA +3580 chr4 + 190214555 165290467 165290466 165290548 82 TTTTTGTTTGTTTGTTTGTTTAAATATGTTCAGTCTTTAAAAAACAAACTCAACTATTGAAAAAGTTTTCCCTTTTTTCTTA chr4 + 94230402 28350862 28350861 28350943 28350862 28350861 28350943 82 TTTTTTTTTGTTTGTTTGTTTTAATATTTTCTAATTTTGAGCAATGAACAAAACTGTTCAAAACCTGTTCTCTTTTCTGCTA .....x...............x.....x...x:x:...:.:x..::...xx....:..x....xx.x...:.....:.x:.. 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 136939605 53274950 +3104 chr4 + 190214555 165293271 165293270 165293309 39 ATACTACACTTGATCTTAGCCAAAAGGCCAAGAAGCGAT chr4 + 94230402 37937484 37937483 37937522 37937484 37937483 37937522 39 ACACTACACTTGATCTTAGCCAAAAGGACGAGAAGCAAT .:.........................x.:......:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 127355787 62858768 +8873 chr4 + 190214555 165294325 165294324 165294473 149 ATGTTAGTGGATTTTCTTTTTAATTCCCAAACAGAGCAACATTTTGCAGATGTTGTACTTAGTGAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGAAGAGAAGGTAAG chr4 + 94230402 24957363 24957362 24957506 24957363 24957362 24957506 144 ATGTTAATGTACTTCTTTTCT-----CCAAACAGAACAGCACTTTTCTGATGTCGTGCTTAGTGAAGAATACCTCAATCTTGGTGTAGAACAGGTGTGCAGTCTGATATCCAGTGACAAACTTACAATTGCCTCAGAAGAGAAGGTAAG ......:..x.:..::...:.-----.........:..:..:...x.x.....:..:.............x:...........::.x.....:........::.:..x..x..............x...x.:................. 21M5D123M 117/144 81.2% 144/94230402 0.0% 5/144 3.5% 140336962 49877593 +9647 chr4 + 190214555 165297596 165297595 165297729 134 TATTTTCTGCAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGACTGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGGTAA chr4 + 94230402 24958778 24958777 24958911 24958778 24958777 24958911 134 TGTTTCCTGGAAGGTATTTGAAGCGGTGATAGCATGGGTAAACCATGACAAAGATGTAAGGCAGGAGCTAATGGCACGCCTGATGGAGCATGTCCGGCTGCCTTTACTTTCCCGGGAGTATTTAGTTCAGGTAA .:...:...x..............:..:...........:...........:.....:.....:...:.x.....x..x........:.....x...:.:.....:...:.:.....:................ 134M 113/134 84.3% 134/94230402 0.0% 0/134 0.0% 140338818 49875737 +10410 chr4 + 190214555 165299503 165299502 165299690 188 ACAGAGGGTTGAAGAGGAAGCATTGGTCAAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTATATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAAGTAGGATC----TGTTTCTCATGCTTGTTATTACCTCA chr4 + 94230402 24959835 24959834 24960025 24959835 24959834 24960025 191 ACAGAGGGTTGAAGAGGAAATATTGGTTAAGAACAGCAGTGCTTGTAAGGATTACCTCATTGAAGCTATGAAGTATCACTTGCTGCCAACTGAGCAACGAGCGCTGATGAAAAGCACTCGAACGAAACTGAGAACGCCTGTTAGCCTTCCAAAAGTAAGACCCTTATTTTTCCAATGCAC-TTATTTCTTCA ...................::......:.....:...........:..:.................x........:..:...........x.....:..x::::.:.....:..::::..:..xx::.....:..:..::.x.:......x......:..:.----.x....:x....x:-.....x.:... 162M4I14M1D11M 144/187 77.0% 191/94230402 0.0% 5/187 2.7% 140339668 49874887 +9106 chr4 + 190214555 165305572 165305571 165305732 161 TCATTTGTTCAAGTGCTTA-----CATTTCTGCCCTTGTAGTTGATGGTGGTGGTTGGGGGCCAAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTGCCTTCCAGGAGGTGCAGGGCAGGTAAGCA chr4 + 94230402 24960792 24960791 24960957 24960792 24960791 24960957 166 TCATATTTACAAATAATTAACAAATATTATCTCCCTTTCAGTTGATGATGGTAGTTGGAGGACAGGCACCAAAGGCAATTCGCAGTGTTGAATGCTATGATTTTAAAGAAGAACGCTGGCATCAGGTGGCTGAGTTGCCTTCCAGAAGATGTAGAGCAGGTAAATA ....x.x.x...:.:x...-----:...x::x.....x:........:....:.....:..x..:...........x..:..x.....x...........:............x.x.....:..:..:..x..............:..:..:..:........::. 19M5I142M 126/161 78.3% 166/94230402 0.0% 5/161 3.1% 140344780 49869775 +3047 chr4 + 190214555 165307299 165307298 165307360 62 CTCCGTCTCAAAAAACAAACAAACAAACAAAAAAACAAAAAAACTTTATGTTGAAATAATTT chr4 + 94230402 67348883 67348882 67348944 67348883 67348882 67348944 62 CTCCACTTAAAAAAACAAATAAACAAACAAAAAACCAGACCAGGTTTATCTCCAAAAAGTTT ....:::.x..........:..............x..:.xx.:x.....x.:x...x.:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 97958416 92256139 +16862 chr4 + 190214555 165310536 165310535 165311571 1036 CTGTACTCCTTTTGCAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTCATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACCGGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGTAATTT--CCTTTTCATTTATTCTACA---TTGCTGCTAAAATTAACGTAGTAGTCATG--------------TTTATGGAATAAATTGTGGCAACATTAGGGCACATGTGAGGTTTTTTGTGTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCCGTCGCCCAGGCTGGAGTACAGT-GGCGCAATCTCGGCTCACTGCAAGCTCCGCCTGCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTATAGGTGCCCGCCACCACGCCCGGCTAATTTTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACTTTGTG-ATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAACATGTGAGGTTTTAACTGGTATTTAAAGATAAGTTTAAAATTTTATCAAGAATTTCCTTAAATGATATGAGTGGTGAGTATAT--------------AAATTTTCTTTCTTATGCATCAGTATCAGTCATCAAATTTTAAAAGCTTATAAATATCAGTAGCTTAGGTAGGAGCCTTCTGGAA---AACAAGC-TGTACCTGTTTTTC------------------ATGTAATTGCTGTGTTTAT-----------------GTTCCACCATTTTC---TTCTCTTAATTTTAGCCCAGTATAACATACCTGAAGTATTTTTCCATATATATGAACTAT-TGACAT-----TTTTTAGAGAAGGAAATGAAGACTATTGTGCTTTATT-ATAGGTTTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAGCAGTGTTGGTGTGGGTGTTGTTGGAGGTAGGT chr4 + 94230402 24961571 24961570 24962544 24961571 24961570 24962544 974 CCGTTTTCTTGCTCTAGGAATGGTGTACATGGGAGGCATGGTTTATGCTGTTGGTGGTTTCAATGGTTCATTAAGAGTTCGCACAGTAGATTCTTATGATCCAGTGAAGGACCAGTGGACAAGTGTTGCTAATATGCAAGACAGGAGAAGCACACTGGGAGCAGCTGTATTAAATGGACTTCTCTATGCTGTGGGAGGATTTGATGGGAGTACAGGTATTTTTGCCTTTACCTTCTGTTGATAAGTTTACTCTTGATGTAACTGTATCAAACATAAATATCTCTTACCTGTGATGAAAGGAATGGTGAGGATGGCATAGCAC-----------CTTGTGGTTGGAGCATGCTTT----AGTGGGCACATCCTTC--TGCCC-------AGTACTTTAGGCATAATGCCTG-----GACAAGTTCC------------CTTTCAGTATTACTTCTATAGTCTAAGGAGC--CTGCGAGCAGAAA-------AATTACACCT--CTAAATTTTTGTCTAGT-----GTAAAGAGGATTATAAACAATGTT-GTCTGAACTGTGGGAA------GGCTTTGTACACACAGTCACTT--GCTTCAC-AGGTGC----ATTAAACC--------TTTTGTCTGG------------------ACATTC---------TTTCTTTAATAGCTACTACTGATGAGCATGTGTACACAGGAGAAAACATTTTCTCTTT-----------------------ATTTCAAGAG-----AAATA-----AATTCAAGGAAGAATTTTTCAAAGTTCCACAAGCTTTTACTAATTTGTCCATTTACAGACACCAAGAATGTGGTGACTGTATTTGGCCATCTAAAGGATACCAGTTACACCTTTTGCATAGTAGTTTAAAATTAATTTAAGTTTACAGATATGAAGAATCTTCTGGAAGATACAAGATACGTTGCATCTAGATTTGTAGAGAACATAATG-------TTGTATTGTCTTGATAGGTTTATCATCAGTTGAAGTTTACAACTTAAAGACTAATGAGTGGTTTCATGTAGCTCCAATGAACACAAGAAGAAGTAGTGTTGGAGTGGGTGTTGTTGGAGGTAAGT .:..x:..:.x:.x:...x.....x.......xx..xx.x....x............:..:.....:.................x........:..:..:..x.................x..:........:...x:....x..........x:.......x.....:.........:.x:.x..:...........x...................x...--.....x.x..:xx.:x.:.---..:..x:.:.x:.x.x:...x:.:x...:--------------x.x...:..x:...x...:x:.::x:.x:....-----------:.....x..xxxx:x.x:...----::...:xx.x.x..:.--:....-------.....xx.-...::...x:.x.-----x:....:...------------.x.x.x:.x:.x..x.:x:..:..xxx....--...x..x:.x.::-------x.::..:..:--....x.....x.x..x.-----...:...x.:xxx.xx..x.....-.:.x.:.:x..xxx..------.:......:-.:x.:x:...:.--..:..x.-.:....----....x.x.--------....:x....------------------.x...:---------....:....xx.x..:x.x..:....:..:.--------------.x.......:.:.-----------------------....:..:..-----.....-----.::.:.:.x.:..:::..::::.:---x......-.x...:x:...x..------------------....::.x:....:...:x-----------------...x....x...x.---x.xx:....xx...::::.:xx.x...x.:x.....x..:..::x:x.x...::.:x..:-.x:...-----...x.......x:x....-------....::.x.x..-........:.....x..x....:x......x.....x.........................x.....:.....:..:..:........x...................:.. 222M2I19M3I29M14I33M11D21M4D16M2D5M7D8M1I13M5D10M12D31M2D13M7D10M2D17M5D24M1D16M6D9M1I12M2D7M1D6M4D8M8D10M18D6M9D31M14I13M23D10M5D5M5D24M3I7M1I14M18I19M17I14M3I60M1I6M5I18M7D12M1I112M 620/890 69.7% 974/94230402 0.0% 230/890 25.8% 140348965 49865590 +9278 chr4 + 190214555 165313233 165313232 165313431 199 TGTAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTCTTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGTGGAGCAGGTACATGTGAACCTGTTTTAGC-----------AACTGAAGCA------------CAAAAATGATGGAAAATAGTTAAAGTAAAATGA chr4 + 94230402 24963437 24963436 24963656 24963437 24963436 24963656 220 TATAGGTAAACTGTATGCAGTTGGTGGCTATGATGGGGCATCACGTCAGTGCCTTAGTTCAGTCGAATGCTATGATGCCAATACAAATGAGTGGAGCTATGTTGCAGAAATGAGCACTAGACGGAGTGGAGCAGGTGA--GTGAACAAAAATTAACAATCACAGTAAAACTGAAGCAGATTTGTGGTTTTAAATTTTATCGAAAATATTAAAGGTAAGCTAA .:.....xx:..x.....x..x..x..:........:..............:.....:x....x.........:....:.xx.............x....:.x..............:..:...............:x--......xx:xx...:.-----------..........------------:...xx.x..x.......x.x..:....:x.:. 138M2D16M11I10M12I33M 155/197 78.7% 220/94230402 0.0% 25/197 12.7% 140349796 49864759 +10594 chr4 + 190214555 165314019 165314018 165314170 152 TTTATAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAGTGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAGGTAT chr4 + 94230402 24967826 24967825 24967977 24967826 24967825 24967977 152 TTCACAGGTGTTGGTGTGTTAAACAATTTACTGTATGCAGTAGGTGGTCATGATGGTCCTTTGGTAAGAAAAAGCGTGGAAGTGTTCAATCCTGTCACCTGTACGTGGAAGCAGGTTGCAGATATGAACATGTGCAGAAGAAACGCAGGTAT ..:.:.........................:.......x.....x...........:.....:...x.......:..x.....:.x::....:::...:x:::.:....::................................:........ 152M 126/152 82.9% 152/94230402 0.0% 0/152 0.0% 140346193 49868362 +12221 chr4 + 190214555 165317785 165317784 165317982 198 AATTTTTTAAATAATTGTTTTCTCTCTGTAATTTTTTAAAGGAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAATATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGTAACAGTTGTCT chr4 + 94230402 24968116 24968115 24968306 24968116 24968115 24968306 191 AATTTTTTG--TAATTGGTTTTCCTCT----CTTTTTTTAGGCGTTTGTGCTGTAAATGGTCTCTTGTATGTAGTTGGAGGAGATGATGGTTCCTGTAATTTATCAACAGTGGAATATTATAATCCAACAACTGATAAATGGACAGTTGTGTCATCTTGTATGAGTACAGGAAGGAGCTATGCAGGTAA-AGTTGTCT ........:--......x...::....----:.....xx...x........x..x........x..:.....x........:.................:..:x.:x....:...........:........:.......................x........:.....:..:..:...........-........ 9M2D16M4D158M1D8M 164/191 85.9% 191/94230402 0.0% 7/191 3.7% 140349669 49864886 +31676 chr4 + 190214555 165322003 165322002 165323150 1148 CTTTTTTCTCTCTTCATTTCTTTGCTCAGGGGTCACAGTTATTGATAAACCATTATGAGCCTGAAGGACATTTTCAGCATATTTATACATGAGAAACAGCCTTCAACAAGTATTTGTGAAGTGACTGAGAATCT-AGCACTTCTCCACTTGTAGCTGCACTTTAAGTCTCAGCAGAAGATACGATCGTCTGCCTTTATAGGCCTCAGATACTGAAGATTATTTTTGGTAGAAGCACCGTGTAGGCTTTTTCTGCAA-TGAGCAGCAGCTGACTGAATTTT-----CATAAGAAAC---------TTGGACTGCAGGACTTAATCTGTAGTCTTTAG--ACAACAGTTGCTTTCATAAAGACTAGTTCTTATCAACCTTGAATGA-CTACAGATTATTTTGTGAAGGAGGATGAAGTAATGTGTGTTCTTGTAAAATTAAATTTTATCTTTATTTCTTCTAAAAATCTGTATACC-----------AGGAACTGAAAATCTTTG-AACAGATATTAAAATCTACGTAAGT-ATACAAACTAGTTGAGGGATACACTGTTTGCTTTTATAAAATAACTTTGATTACATGAATATAATAAATTATGTGCATATAAATGTGTGTCTATA---TGCTTTCCTTTAAATATGTTTGAAAAGATGTTTGAAACTTGATTATACTATTTATAA-TTGGCACAGTACTTTGAATTATGCCAGTACTACATTGTAAAACAGAGTTGTATTTTTTGATATTTAACAATGCTTAACACT-TTAAATGCCACTTCTGAGGAATGGACCTGGTGTAAC-ACACTTGAATATGTGTGATGCCAAACTTTTTAAAATACAATATAAATTATGCTTATTTATTATTTTCTTTAGTTTAATCTTGGTCATGTTTTGGTG-TGTATTTTTAATTTTTTTCTTAAATTAACACTTTGGCATGAACATTACTGCAGGTTTTTGATGAATATAATGAATGTATGGAATTCAATTGAATTTGCATGGTCTTCGGAATTTTTTCTGTGTGTATAAATTTAGCTGCTATTAACAGAAGAGAGAACTTTCTGTGAGTAGCCATGTGTGTTGATCAGATACAGTTTTTCTGAGATCTTCAATTAATCTCACTTTAAAAATGACCAAAAC--ATGTCTTTCTTGA---ATTAACTTTGAATAAA-AGTTTGTATATTATTT chr4 + 94230402 24968903 24968902 24970016 24968903 24968902 24970016 1114 CTTATTCCTTTCTTCCTTACTCT----AGGTGTTACAGTTATTGACAAACCGTTATGATCGATAATGGGATTTTCAATTTGATTATGCACTAGAAGCAGTCTTCAACAAGTGTATTTGAAGTGACTGAGAACCTTAGCACTTCTCTACTTGTAGCTGCACCTTGAGTCACAGTGGAAGATGTGACTGTCTACAATTACAGATGATGGATGATGAAGATTACTCTAGGTAGAAGCAGTGCGTAGGACTACTCTGCGGTTGAACAGGGGCTGACTGAATTTTTGAAGTGTAGTAGACCGTTTCTTTTTTTATTGCAAGA------------TCTTCAAACACAAAAGCCACTTTCATAAGGACAGACTTATGTCAGTTGTGACTGAGAAACAGATTGT----CAGTGGAGAATG-----GTGTGTATGCTGGTGAAAGTAAA-TTTGTCTTATTTTTTTCCAGAGACTAATAAACATATTTAAAGAGATGAACTGTCAGTCTTCATAGTAGGTATCGAATTCCACCTCAGTAATTCAAGCTGGCATGGGGGAAATTTGTTTCCTTTTATAA---AACTTTTGTTACATAACTATAA-----TATGTGCATATGTATGTGTGAGCATAAGTTGCTTTCTATTGAAATTCTTCAGAAA-------CCAACTTTATTA----ATTTATAATTTGGCACAGTAC--------------GTACTATGTTGTAAAAGAGAGTTGTATTTTTTGATATTTAACGATACTTAATGCTACTAATTCCCACTGAAGGAGATCAGAGATGGTATAATGATTCTTGAACAGGTGTAATTTCGAGGTCTTTTTAATA------AAAATGTCTGTACTTAATGGTTTTTTCTGTTCAATTTTGGTCACATTTAGATGTTACTTTTCTTACCTTTTTATGCGATAGGTGATTTGGCATGAAAATAACCGAAAATT---------TATAATGAATGTGTGAAACTAAGTTGAACTTGCATGGTACT--GAGGTCTCTTAATGCGTGTAACCTTAGCTTCTGTTAGCTAATACCTGGATATACTGTATGTGGCCATGTTCATAGAGCAGCT--CGTTTCTATTCATTCCTTGGATGGCCTC-CTTTTAACACGACCAAAGTTATTGTCATATTTGAGATATTTTCTTCAAATAAACAATTTGTATATGGTTT ...x..:..:.....x..x..:.----...x..:...........:.....:......x.xxx..x.:x.......::x.:x....:..:x....:...:...........:.x.x...............:..-..........:..............:..:....x...::......::..::....:.xx...:..::xx::...:x.........:.:.x..........x:.:.....x:.x:.....::-...:...x:..............-----::..:x.:..---------..xx.:....:..------------....:.:--....x..:::.........:...x:::.:x.:...:::x...x...-xx.......:.----:::x....:...-----:.....:.x..x..:...x....-...:....xx...:...:.:.:.::x:..x..x-----------.x......xx.:....::-.::..:...::..x..:..x.x...-..x...:..:.:xx:...:x.xx:.....x.........---......x:......:.x.....-----...........:x.......xx:...---.......:x..:..xx.x..:::...-------xx.....x....----........-............--------------......::........x.........................:..:.....::..-:...x.x.....xxx.::..x::..xx....:...:-.:x......:.x....:..x:.:.:x.:...xx....------...x.:.x:x..:...x.:x...:..:x...:...:.......::...x.:..-.::x...:.x.::.....x.xx:..x::::x...........x..x..:.x.::..---------............:..:..:.x.:.....:.........x:.--..:x.:.:.:x:..:..:...x:......x..:...:.x:.x:xxx.:.:x.x....:x..:.......x::.x..x...x.--x....:.x.xx:x..:.:::x.:::...-....x..x.:.......::--x....x.x:....---...xx...::......-.:.........x:... 23M4D107M1I121M1I23M5I10M9I13M12D7M2I46M1I11M4D12M5D23M1D33M11I18M1I25M1I39M3D22M5D26M3I26M7D12M4D8M1I12M14D55M1I36M1I37M6D53M1I56M9D41M2D82M2D28M1D19M2I13M3I16M1I16M 748/1069 70.0% 1114/94230402 0.0% 124/1069 11.6% 140353100 49861455 +14652 chr4 + 190214555 165333364 165333363 165333630 267 TTGAAAAATGGCAACAAATGAAAGTGTCAGCATCTTTAGTTCAGCATCCTTGGCTGTGGAATATGTAGATTCACTTTTACCTGAGAATCCTCTGCAAGAACCATTTAAAAATGCTTGGAACTATATGTTGAATAATTATACAAAGTTCCAGATTGCAACATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTATTCTGTTTACCTGGATTTTTATTTCAATTTATACCTTATATGAAAAAATACAAAATTCAAAAGGTGAG chr4 + 94230402 24971053 24971052 24971319 24971053 24971052 24971319 267 TTGAACGATGGCAGTGAACGACAGCGTTAATATCTTGAACTCTGCTTATCTGGCAGTGGAATACATAGACTCTTTCCTGCCTGACAATCCTCTGCAGCAGCCATTTAAAAATGCTTGGAATTACATGCTGGACAACTACACCAAGTTCCAAATAGCGACGTGGGGGTCGCTTTTAGTTCATGAAGCTTCGTACTTCTTGCTCTGCGTACCTGGATTCATCTTTCAGTTTATACCCTACATGCAAAAGTATAAGATTCAACCGGTAAG .....x:......:::..:..x..:..:.::.....x.::..x..x.x::....x........::....:..x:.::.:.....x...........:x.:....................:..:...:..:.:..:..:..x........:..x..:..:.....:..x...x.............:::x..:.....::....:x..........:x.x.....:........:..:...x....:..:..:......xx...:.. 267M 198/267 74.2% 267/94230402 0.0% 0/267 0.0% 140362311 49852244 +10883 chr4 + 190214555 165337777 165337776 165337969 193 TTTTCTTCGTAGGATAAGCCAGAGACATGGGAAAACCAATGGAAGTGTTTCAAAGTTCTTCTCTTTAATCACTTCTGTATCCAGCTGCCTTTGATTTGTGGAACCTATTATTTTACAGAGTATTTCAATATTCCTTATGATTGGGAAAGAATGCCAAGATGGTACGTAGATAAAAATTTGGCTTTTACACCCA chr4 + 94230402 24972322 24972321 24972508 24972322 24972321 24972508 187 TTTTTTTCTTAGGATAAACCAGAAACATGGGAAAAACAGTGGAAGTGTTTCAAAACACTTATCTTCAATCACTTTTTCATTCAACTTCCTCTAATTTGTGGCACATACTACTTCACAGAATATTTTAACATTCCATATGAGTGGGAAGAGATGCCTAGGTGGTATGTAG------ATCTGTCTTGTACATTCA ....:...x........:.....:...........x..:...............::x...x....:........:.x:..:..:..x...:.:........x..x..:..:..:.....:.....:..:.....x.....x......:::.....x..:.....:....------..:..x...x....::.. 169M6D18M 147/187 78.6% 187/94230402 0.0% 6/187 3.2% 140365455 49849100 +8289 chr4 + 190214555 165338637 165338636 165338784 148 ATTTTTATCTT-AAAGGTATTTTCTTTTGGCAAGATGCTTTGGTTGTGCAGTCATTGAAGATACTTGGCACTATTTTCTGCATAGACTCTTACACCACAAAAGAATATACAAGTATATTCATAAAGTTCATCATGAGTTTCAGGTATGT chr4 + 94230402 24972784 24972783 24972932 24972784 24972783 24972932 149 ATTTTCATTTTTGAAGGTATGTTTTGCTTGCCCAGTGTTTTGGATGTGCAGTGATTGAGGATGCCTGGCACTATTTCCTGCATCGACTGCTGCATCACAAAAGAATATACAAGTACATCCATAAGGTTCACCACGAGTTTGTAGTAAGT .....:..:..-:.......x..:.x:.x..xx::..:.....x........x.....:...:.:...........:......x....x:.:..:....................:..:.....:.....:..:......xx:...x.. 11M1I137M 115/148 77.7% 149/94230402 0.0% 1/148 0.7% 140365853 49848702 +10005 chr4 + 190214555 165340200 165340199 165340395 196 TTTCTTATCTGTT-TGTCTT--AGGCTCCATTTGGAATGGAAGCTGAATATGCACATCCTTTGGAGACTCTAATTCTTGGAACTGGATTTTTCATTGGAATCGTGCTTTTGTGTGATCATGTAATTCTTCTTTGGGCATGGGTGACCATTCGTTTATTAGAAACTATTGATGTCCATAGGTGAGTATTAATTTCTGTTC chr4 + 94230402 24974265 24974264 24974458 24974265 24974264 24974458 194 TTTCCTGTCTGTCCTGTTTTGTAGTCTCCATTTGGAATGCAAGCAGAATACGCACATCCTCTGGAAACGCTCATCCTTGGAGCTGGCTTCTTTATTGGAATTGTTGTCTTCTGTAACCATGTGGTTCTTCTGTGGGCATGGGTAATATGTCGCCTGATGGAAACCATTGATGTGCACAGGTGA-----AATCTTTGTTC ....:.:.....:-...:..--..x..............x....x.....:.........:....:..x..x..:......:....x..:..:........:..xx.:..x...:.:.....::.......x...........:.:xxx...::.:x.:.....:........x..:......-----...:.:..... 13M1I6M2I161M5D11M 149/191 78.0% 194/94230402 0.0% 8/191 4.2% 140365935 49848620 +13123 chr4 + 190214555 165341693 165341692 165342134 442 AACAACAATCATTTGAGATGTATTTATTCCTTAATAATCTTTATCATTTTTGTTTCAGTGGTTATGATATTCCTCTCAACCCTTTAAATCTGATCCCTTTCTATGCTGGTTCTCGGCATCATGATTTCCACCACATGAACTTCATTGGAAACTATGCTTCAACATTTACATGGTGGGATCGAATTTTTGGAACAGACTCTCAGTATAATGCCTATAATGAAAAGAGGAAGAAGTTTGA---------GAAAAAGACTGAATAAATATCTCACGTAAACCT-----------TCCTGAAAGATAAACGTTTTCCTGAATTCAGAAACTAGTAGCTAACATTGCTTCTGGAGAGCAGAAATAAGCATGTCTTCTGGCTACTAAGTGATA---AAAAGAACATTAACAACCTTTAATTACCTTCCTAGTGGGAACTTTTTCTACTTTACCTACAAGTTCTATATATGT chr4 + 94230402 24975841 24975840 24976289 24975841 24975840 24976289 449 AATAATCCTTACTACAAATGTTTTTGTTTTTT-------TTTCTCCTTCCCCTCT-AGTGGCTATGATATTCCACTGAACCCTCTTCATTTGGTGCCTTTCTATGCTGGAGCCCGTTTTCACGATTTCCATCACATGAACTTTATTGGCAATTATGCATCGACCTTCACGTGGTGGGACAGAATCTTTGGCACAGACTCTCAATTCATTGCCTATAAAGAAAAAGAGAAGCAGCAGCAACTCAGGATGAAGAAGACTAACTAAAAATCCAGTGTAAAAATGGTGATGCTAATACTGGTAG-TCAACTTTTTGCTTTTCTTTAAAGCAA--AGTCATGATTGGTTATT--AAGCAGAAAT---CATTTTCCTTGGCTACTAAGTCTTAGGGAAAAAAACAAGACTTAAACTGCAGTATCTTCCTAATGGGAATGCTTTCTATTTTATAGGTAAGCATCACATATAT ..:..:xx.:.:.xx.:....x...:..::..-------...x..x..:::x.:.-.....:...........x..x......:.xx..:..:.x..............xx.:..x:x...:........:...........:.....x..:.....x..:..x..:..:........:x....:.....x...........:.x:.x.........x.....:::....x..:xxx.---------...:......:.x....x...:x::.....xx.-----------.x...:x..-.x...x....x..xxx:.:x:..:.x.--..::.xx....x..x.x--:.........---...x.::::............xx..---....:....xx.x:x.xx:.xx.x..:.......:......:x:......:....:xx::...:x::.:....:. 32M7D16M1D182M9I33M11I9M1D27M2D17M2D10M3D25M3I75M 295/426 69.2% 449/94230402 0.0% 39/426 9.2% 140365852 49848703 +3092 chr4 + 190214555 165350420 165350419 165350461 42 TTTTTTTGTTGTTGGTGGTGGGAGGTTTTGTTTTGTTTTGTT chr4 + 94230402 61017316 61017315 61017357 61017316 61017315 61017357 42 TTTTTTTGTTGTTGGTGGTGGTTGGTTTTTTTTTGTTTTTTT .....................xx......x.........x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 104333104 85881451 +3453 chr4 + 190214555 165353642 165353641 165353713 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGATTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x::...........:..x.xx:.::..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 89320436 NA +3004 chr4 + 190214555 165356993 165356992 165357040 48 TCATTCTATTCCAGTTTATTTTTACCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 22344071 22344070 22344118 22344071 22344070 22344118 48 TCCTTCATTTCCAATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTT ..x...xx.....:...xx...........:.......:......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 143012922 47201633 +3048 chr4 + 190214555 165357007 165357006 165357050 44 TTTATTTTTACCTTTTTTTTTTTTTTTTTTTTTTGAGAGAGTGT chr4 + 94230402 15426616 15426615 15426659 15426616 15426615 15426659 44 TTCATTTTTACCTTGTTTTTTTTTTGTTTTTTTTAAGAGACTAT ..:...........x..........x........:.....x.:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 149930391 40284164 +3086 chr4 + 190214555 165374049 165374048 165374133 85 AGGTAAGGATTTACTATTGATATTTTGTCATTTTCTGTTTTGTAGTTCTTTTGTCTCTCTTTTCCTCTGTTGCTGTCTTCCTTTG chr4 + 94230402 15856090 15856089 15856173 15856090 15856089 15856173 84 AGGTAAAG-TAAGCTACTATTATTTAGTCATTTTTTTCCTTTTGGTTTGTTTGCCTGTTATGTTTTTTGTTGCTGTTTGCTTTTG ......:.-.xx:...:.:x.....x........:.x::..x.:...:x....:..x.:x.x.::.:.........:.x.:.... 8M1D76M 57/84 67.9% 84/94230402 0.0% 1/84 1.2% 149517959 40696596 +17353 chr4 + 190214555 165379194 165379193 165379624 431 GCACGGCCGGCGGCGGCGGAGCGCAGCG--ATGGCCGGGCGAGGGGGCAGCG-----CGCTGCTGGCTCTGTGCGGGGCACTGGCTGCCTGC-GGGTGGCTCCTGGGCGCCGAAGCCCAGGAGCCCGGGGCGCCCGCGGCGGGCATGAGGCGGCGCCGGCGGCTGCAGCAAGAGGACGGCATCTCCTTCGAGTACCACCGCTACCCCGAGCTGCGCGAGGCGCTCGTGTCCGTGTGGCTGCAGTGCACCGCCATCAGCAGGATTTACACGGTGGGGCGCAGCTTCGAGGGCCGGGAGCTCCTGGTCATCGAGCTGTCCGACAACCCTGGCGTCCATGAGCCTGGTAAGGG-CGCTG----CCCCCTGACAGCCCTGGGGGCATCCCGGAGGGGGGCGGCAGAGGGTGGGACTGGTGGCGGTGGGGGAA----GGAGGGAGGGATGGGC chr4 + 94230402 24980961 24980960 24981380 24980961 24980960 24981380 420 GCGCGGCCGCAGGCGGAGGAGCCGGGCGGGATGGC--GGCGCGGGAGCTGCGGCTGTTGCTGCTGGCGCTGGGCGCGCTGCTCGTCGCCTgccgggcggcc-------------------gagcccgcggcg------gggggcagcagccggcggcggcggcTGAGCGCCGAGGAGGGCATCTCCTTCGAGTACCACCGCTACGCCGAGCTGCGGGAGGCGCTGGTGGCCGTGTGGCTGCAGTGCCCGGCCATCAGCAGGATCTACACGGTGGGGCGCAGCTCCGAGGGCCGCGAGCTGCTGGTCATCGAGGTGTCCGACCGGCCCGGCGAGCACGAGCCCGGTAAGGGACGCGGAGGACTCTGCGGTGGGCGCTGCGGCAgcgcggggcgagg-ggcgggcggtgcccccgctcccggcggaggggctgcgggcggggggctgcgc ..:......xx.....x.....xx:...--.....--....x...:..x...-----:.........x...x...x.x::..x.::......-...:...:-------------------.......x....------.x.....xx..x.....x.........x:xxxx.....x...........................x..........x........x...x.................x.x..............:...................:.........x.....x............x........x:x..:....xx..:.....:........-...x.----.:.:x:.:::.x.x:x.x....x.x...:.x.:..-...:.:x....xxx.:.x.xx...:..:..::----..:x..:...x..x.. 28M2I5M2D15M5I35M1I8M19D12M6D212M1I5M4I35M1D32M4I16M 312/403 77.4% 420/94230402 0.0% 45/403 11.2% 140398233 49816322 +3448 chr4 + 190214555 165396931 165396930 165397003 73 TGCTCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCGGGAGGATGGCTTGAGCCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.x......:.........::::........x.xx.x.:.xx:.....:.....:..x..x:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 89363726 NA +3438 chr4 + 190214555 165398342 165398341 165398412 71 ACACACATATACACATGCATACACATATACACATATATGTATATAGGTGTATGAATACATATAGGTACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ..........x........x......::.:...x.x..:.:....xx...:..x:..:..::.x.:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 142798144 47416411 +3529 chr4 + 190214555 165398429 165398428 165398485 57 TATATACAAATGTGCATGTGTATACATATGCATACACACACATTTAAATGGAGTATG chr4 + 94230402 65653150 65653149 65653206 65653150 65653149 65653206 57 TATATACAAGTTTGCCTATGTATACACATACATACACACATCTTGAAATGAAGAATG .........:.x...x.:........:..:..........:x..x.....:..x... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 99745279 90469276 +9922 chr4 + 190214555 165398663 165398662 165398874 212 GCTCACTTGACTTGAAAATCCAATATTTTTTCTGAAGTAGGTGTTGCCATGGTGACAGAACGGCTTAGCAACTGAAGACAGATTTCATTGGCTGGCTGTCTGCA-GACTTGCTTG-TTGAGTGGCATTAATATGTTGCCTCCTGCTGTTTTTTTTCTGAGGAGACCATCTGGCATTAGCTGTATTTAAAGGTACAGTTCTGTTAAACAAAGAAT chr4 + 94230402 24988206 24988205 24988416 24988206 24988205 24988416 211 GCTCATCTGACTTGAAAACTGAAGAATCGT-CTGAAATAGATGTAGCCATGGTGACAGAGAGGATTAGCAGCCTGAGACTGATCTCATTGGTCTGCTGCTAGCATGAGTCGCTTGTTTGAGCAGCATTAATATGTTGTCTCACGCTG--CTTTATATGCTGAGACCATCTGGCATCAGCAGTATTTAAAGGTGCAGTTGTGCTGTGGAAAGGGT .....::...........::x..x.x.:x.-.....:...:...x..............:x..x......:.:x:....x...:.......::x....::x...-..x.:.....-.....::..............:...x:....--:...x.x..xx...............:...x............:.....x..:.:x:x....::. 30M1D73M1I10M1I31M2D65M 159/209 76.1% 211/94230402 0.0% 5/209 2.4% 140410457 49804098 +3174 chr4 + 190214555 165410113 165410112 165410178 66 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGATTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x:..--......:...........::........x.xx.x...x.:x.......::.:.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 89376912 NA +3088 chr4 + 190214555 165414695 165414694 165414744 50 ATACACACACACACACATACACACACACACATATTTACATATATACACAT chr4 + 94230402 74526074 74526073 74526123 74526074 74526073 74526123 50 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTAT ..x...............:x...:.....x....x...:......:::.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 90888621 NA +3602 chr4 + 190214555 165447431 165447430 165447500 70 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::....:...:.--....:.:...........::........x.xx.x...x........:....:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 89414234 NA +3162 chr4 + 190214555 165453312 165453311 165453374 63 CTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTCTTTC chr4 + 94230402 13214821 13214820 13214883 13214821 13214820 13214883 63 CTTCTTATGTTCCTTAGTTCATTGCTTGCCTTCTTCCCTCCTTTCTGTCTCTCTCTCACATTC ....:.x:x......xx...x..x...x.:.:.....:........x..........x.x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 152238491 37976064 +3287 chr4 + 190214555 165461154 165461153 165461221 68 GAGCCTCTGCCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAATAACAAAGGA chr4 + 94230402 16379597 16379596 16379664 16379597 16379596 16379664 68 GAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAGGA ..:...:xx..:.......x:.....x....x.:.......:..:..:x..:.:..:.xx........ 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 149081557 41132998 +7734 chr4 + 190214555 165464357 165464356 165464591 235 AAAACATCTCCATGCTATCTATTAATCTTTTAGGTGAGCCTGAATTTAAATACATTGGGAATATGCATGGGAATGAGGCTGTTGGACGAGAACTGCTCATTTTCTTGGCCCAGTACCTATGCAACGAATACCAGAAGGGGAACGAGACAATTGTCAACCTGATCCACAGTACCCGCATTCACATCATGCCTTCCCTGAACCCAGATGGCTTTGAGAAGGCAGCGTCTCAGGTGAG chr4 + 94230402 84166141 84166140 84166371 84166141 84166140 84166371 231 AAAGCATCTCATTGCTTCGTATT----CTACAGTCAAGCCAGAATTTAAGTACATTGGCAATATGCATGGAAATGAAGTTGTGGGAAAAGAACTGCTGATATACCTTGCGCAGTATCTGTGTTCAGAGTATCTTCTGGGGAACCCTCGCATCCAAACTTTGATCAATAACACCAGAATTCATCTCCTGCCTTCACTCAACCCAGATGGGTATGAACTGGCTGCAGAAGAGGTAAG ...:......xx....x:x....----:.x:..x::....x........:........x...........:.....:.:...x...x:.........x..x.x.:.x..x.....:..:..:xxx..:..:.xxxx.......xxxxxx..:xxx.x::.....x.:.::...x.x.....:x..x.......x..x...........x.x...:xx...x..:xxxx....:.. 23M4D208M 156/231 67.5% 231/94230402 0.0% 4/231 1.7% 81298216 NA +14847 chr4 + 190214555 165464357 165464356 165464590 234 AAAACATCTCCATGCTATCTATTAATCTTTTAGGTGAGCCTGAATTTAAATACATTGGGAATATGCATGGGAATGAGGCTGTTGGACGAGAACTGCTCATTTTCTTGGCCCAGTACCTATGCAACGAATACCAGAAGGGGAACGAGACAATTGTCAACCTGATCCACAGTACCCGCATTCACATCATGCCTTCCCTGAACCCAGATGGCTTTGAGAAGGCAGCGTCTCAGGTGA chr4 + 94230402 25012630 25012629 25012863 25012630 25012629 25012863 234 AAGACATTTTCTTCGTTCTTCTTTCTCTTGCAGGAGAGCCAGAATTTAAATATGTTGGGAATATGCATGGGAATGAAGCTGTTGGAAGGGAGCTGCTCATCTTCTTGGCTCAGTACTTGTGTAATGAATACCAGAAAGGCAATGAAACTATTATCAACCTGATCCATAGCACACGTATCCATATCATGCCATCTTTGAATCCAGATGGCTTTGAGAAGGCAGCATCACAGGTAA ..:....:.:.x.xx.x::.x..xx....x:...x.....x...........::......................:.........x.:..:........:........:......:.:..:..:...........:..x..:..:..x...:.............:..:..x..:..:..:........x..::....:.......................:..x.....:. 234M 187/234 79.9% 234/94230402 0.0% 0/234 0.0% 140451727 49762828 +12887 chr4 + 190214555 165467660 165467659 165467892 233 TTTTTCTCTTTGACTTTTTTTTTTTTAGCCTGGTGAACTCAAGGACTGGTTTGTGGGTCGAAGCAATGCCCAGGGAATAGATCTGAACCGGAACTTTCCAGACCTGGATAGGATAGTGTACGTGAATGAGAAAGAAGGTGGTCCAAATAATCATCTGTTGAAAAATATGAAGAAAATTGTGGATCAAAACACAAAGGT----AGTGACCACGGGATAGTCTTCTTGGGTTCGTCTCT chr4 + 94230402 25014809 25014808 25015043 25014809 25014808 25015043 235 TCTTTCTGTTT--CTTTCCCTCATTTAGCCTGGTGAACTTAAAGACTGGTTTGTTGGTCGAAGTAATGCCCAGGGGATAGATCTAAACCGAAATTTCCCTGATCTGGATAGGATAGTCTATGTTAATGAGAAGGAAGGTGGCCCAAACAATCACCTCCTGAAAAACATGAAGAAGGCTGTGGACCAGAATCCCAAGGTAAGCAGAGGCTGTAGAGCAAGTTGCTTGCATGCCTCTCT .:.....x...--....:::.:x................:..:...........x........:...........:........:.....:..:..:..x..:..............x..:..x........:........:.....:.....:..x:.......:........:::......:..:..:x.x.....----..x.:.::::.:::.:x:.x....x:.x.x..... 11M2D185M4I35M 178/231 77.1% 235/94230402 0.0% 6/231 2.6% 140452851 49761704 +3042 chr4 + 190214555 165480939 165480938 165481047 109 ATGGGTAATTTTAATTTTCTTCTTTGTTCTTGTCTGTCTCTACATTTTCTACAATGGATATATATATATATATATATATTTTTTTTTTTTTTTTTAGCAAAAATAAGAT chr4 + 94230402 33324172 33324171 33324280 33324172 33324171 33324280 109 ATCAGTAATTTCATTATACTTTACTGCTCTTATTACTCATCATCCGGTACACCATTGAAGAAAATCTGTATATGAATCTTTTTTTTTTTTTTTTTAATCAGAAAAGGAT ..x:.......:.x.x.x...:x:..:....:.:xx..x::.:x:xx.x:..x..x..x:x.x..x.:.....:x..x..................::x.:..x.:... 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 132156767 58057788 +3026 chr4 + 190214555 165480995 165480994 165481033 39 GATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 + 94230402 24792625 24792624 24792663 24792625 24792624 24792663 39 GATATATATATATATATATAGGTTTTTTTTGTTTTTTTT ....................x:........x........ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 140688370 49526185 +9891 chr4 + 190214555 165482196 165482195 165482366 171 CAATGATTATTAAATTTATAA-TCCTTTTAAT-CTCTCATCTGAACAGCTTGCTCCTGAGACCAAGGCTGTCATTCATTGGATTATGGATATTCCTTTTGTGCTTTCTGCCAATCTCCATGGAGGAGACCTTGTGGCCAATTATCCATATGATGAGACGCGGAGTGGTAGGTA chr4 + 94230402 25015474 25015473 25015646 25015474 25015473 25015646 173 CACTGAATAATCAATTTTTAACTGCTGGTAATGCTGTTTTTTTTAAAGCTTGCTCCTGAAACGAAAGGTGTCATTCACTGGATTATGGATATTCCCTTTGTGCTCTCTGCCAATCTTCATGGAGGAGACCTTGTTGCAAATTACCCTTATGATGAGACTCGGAGTGGTATGTA ..x...x..x.x.....x...-.x..xx....-..x.:x.:.xx.x.............:..x..:.x.........:.................:........:...........:.................x..x.....:..x...........x..........x... 21M1I10M1I140M 142/171 83.0% 173/94230402 0.0% 2/171 1.2% 140466722 49747833 +13219 chr4 + 190214555 165484410 165484409 165484609 200 TTTGTTTTCTAGGTAGTGCTCACGAATACAGCTCCTCCCCAGATGACGCCATTTTCCAAAGCTTGGCCCGGGCATACTCTTCTTTCAACCCGGCCATGTCTGACCCCAATCGGCCACCATGTCGCAAGAATGATGATGACAGCAGCTTTGTAGATGGAACCACCAACGGTGGTGCTTGGTACAGCGTACCTGGAGGTGAG chr4 + 94230402 25016670 25016669 25016869 25016670 25016669 25016869 200 TTTTCTCCCCAGGCAGTGCTCATGAATACAGCTCCTGCCCTGATGATGCTATTTTTCAAAGCCTGGCTCGCAGTTACTCTTCTTTAAACCCCGCCATGTCTGATCCAAACAGACCACCATGTCGTAAAAATGACGATGACAGCAGCTTTGTGGATGGAACGACCAATGGAGGTGCATGGTACAGTGTCCCAGGAGGTGAG ...x:.::.:...:........:.............x...x.....:..:.....:......:....:..x:xx...........x.....x...........:..x..:x.:...........:..:.....:.................:........x.....:..x.....x........:..x..x......... 200M 164/200 82.0% 200/94230402 0.0% 0/200 0.0% 140467740 49746815 +11551 chr4 + 190214555 165487422 165487421 165487581 160 TTTGGTGTTTTGGCAGGGATGCAAGACTTCAATTACCTTAGCAGCAACTGTTTTGAGATCACCGTGGAGCTTAGCTGTGAGAAGTTCCCACCTGAAGAGACTCTGAAGACCTACTGGGAGGATAACAAAAACTCCCTCATTAGCTACCTTGAGCAGGTAA chr4 + 94230402 25020783 25020782 25020942 25020783 25020782 25020942 160 TTTTCTGGCTTTGTAGGAATGCAGGACTTCAATTACCTCAGCAGCAACTGCTTTGAAATCACAGTGGAGCTTAGCTGTGAAAAATTCCCACCTGAAGAAACTCTGAAGGGCTATTGGGAGGACAACAAGAACTCCCTCATCAATTACATTGAGCAGGTAA ...xx..x:..x.:...:.....:..............:...........:.....:.....x.................:..:..............:.........:x...:........:.....:...........:.::...x............ 160M 136/160 85.0% 160/94230402 0.0% 0/160 0.0% 140466639 49747916 +9855 chr4 + 190214555 165495510 165495509 165495687 178 TTCTGCATATTTCATGTGCTTTGTGATTTGATATTCTGCCTTCC--------TACAGCAAAGGATGGTGATTACTGGAGATTGCTTATACCTGGAAACTATAAACTTACAGCCTCAGCTCCAGGCTATCTGGCAATAACAAAGAAAGTGGCAGTTCCTTACAGCCCTGCTGCTGGGGTAAGTAATC chr4 + 94230402 25025666 25025665 25025838 25025666 25025665 25025838 173 TTATGCATATTT-------------ATTTGATTTTATTTCTTCCATCTTCTCTGCAGCCAAGGATGGTGATTACTGGAGACTGCTTGTGCCTGGAAACTACAAACTCACAGCCTCAGCACCAGGTTATCTAGCAATAACTAAAAAAGTAGCTGTGCCCTTTAGTCCTGCTGTTGTGGTAAGTGATC ..x.........-------------.......x..x.x:.....--------.:....x.....................:.....:.:...........:.....:...........x.....:.....:........x..:.....:..x..x..:.x:..:.......:..x.......:... 12M13D19M8I134M 138/165 83.6% 173/94230402 0.0% 21/165 12.7% 140469844 49744711 +13778 chr4 + 190214555 165497482 165497481 165498031 550 TAATAATATGTT-CTTGATTTTCTCTTTTAGGTTGATTTTGAACTGGAGTCATTTTCTGAAAGGAAAGAAGAGGAGAAGGAAGAATTGATGGAATGGTGGAAAATGATGTCAGAAACTTTAAATTTTTAAA--AAGGCTTCTAGTTAGCTGCTTTAAATCTATCTATA---TAATGTAGTATGATGTAATGTGG------TCTTTTTTTTAGATTTTGTGCAGTT---AATACTTAACATTGATTTATTTTTTAATCATTTAAATATTAATCAACTTTCCTTAAAATAAA---TAGCCTCTTAGGTAAAAATATAAGAACTTGA-TATATTTCATTCTCTTATATAGTATTCATTTTCCTACCTATATTACACAAAAAAGTATAGAAAAGATTTAAGTAATTTTGCCATCCTAGGCT---TAAATGCAATATTCCTGGTATTATTTACAA-TGCAGAATTTTTTGAGTAATTCTAGCTTT---CAAAAATTAGTGA------------AGTTC------------------TTTTACTGTAATTGGTGACAATG----TCAC--------ATAATGAATGCTATTGAAAAGGTTAACAGATACAGCTCGGAGTTGTGA chr4 + 94230402 25026923 25026922 25027516 25026923 25026922 25027516 594 TACCAATATTTTGATTGCTTCTCTTGTTCAGGTTGATTTTGAACTGGAGTCGTTGTCTGAAAGAAAAGAAGAGGAAAAAGAAGAGCTGATGGAATGGTGGAAAATGATGTCAGAAACACTAAATTTTTAAATGAAGATTTTGGCTTTTAAGCTTTGAGTCTGT-TATATGTTGATTTAGTATAATGTACTGTGGAAAGTCCCTATATTTTAGATTTTGTGCACTTCACAATATTTAACTTCGAT---TTTTTCAGTCATC----TTTTGATTAATATGATTAAAAATAAATACTAAACGCCTAGCTAGATACATAAGTTATTAATTTTCTTTCATATTGTTATAGAAAATTTACTCTT---------GTATACAAACCAGAAAAAAAACGAGTGAA-TGTTCCTGC------AGACTATATGGATGTACAATCTTGTGTATTATGTACAAGTTCAGAATGCGTAAGTTAAGTTTTGATTTAAGAAAAAATAAATAAAACACTGTAGTCAGTTCCCAATACCACCAGAAATATTTGACAGTGCATAGTAGTAGTGCTCTTCACTGAGTTCTATACTGAGTGTTATTGAAATGGTTTATAATAATAACGTGGTGCTGTAA ..x:.....x..-x...x..:...:x..:......................:..x........:...........:..:.....::...............................x:............--...::..:x:x..xxxx.....:.:...:.-....---.:..x......:.....x.....------:..x.x................x..---....:.....x.:...---.....:.:....:----.x..:..:..:x.xx:.x........---..:x.x.:...x..:.x.:.....xxx..:.-.x.x......x:.x.....x.:x...:.:.:.:---------x..:.....xx..x.x.:...x..x.x..-.:x.::...------..:..---.::...:.xx..:::xx.......x.....-.x......x:x.x::x...x.:.x.x...---x......x.:.:.------------.....------------------...x..x..:xx.:..:::.:..----....--------...x...:..:........x....x.:.:xx.:.:.x:..x.:...:. 12M1I118M2I30M1D4M3I23M6I25M3I16M3D13M4D26M3I31M1I33M9D29M1D9M6D5M3I30M1I29M3I13M12I5M18I23M4I4M8I48M 380/526 72.2% 594/94230402 0.0% 92/526 17.5% 140470559 49743996 +3187 chr4 + 190214555 165501936 165501935 165502059 124 GCGCCTGCAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAAC---------TTGGGAGGTGGAGGTTGCCGTGAGCCAAGATTGCGCC-----CCTGCACTCCAGCCTGGGTGACAGTTGAGACTCTG chr4 + 94230402 76033206 76033205 76033341 76033206 76033205 76033341 136 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCAT-GGTGACTGCAGAGAGCTTG ..:.x..:...:............:........x.xx.x...x::.......---------.....xx..:..:xx..x:.:x.:x..::xx..:...-----.....x.-.....x.-......x.:x....x::.. 52M9I37M5I7M1D7M1D19M 85/122 69.7% 136/94230402 0.0% 16/122 13.1% 89468730 NA +3041 chr4 + 190214555 165514467 165514466 165514513 47 CAAAAAAAACAAAAACAAAAAAACAAACAACAGCAACAAAAATTAGC chr4 + 94230402 21612839 21612838 21612885 21612839 21612838 21612885 47 CAAAAAGAACTGAAACAAACAAACAAACAACAACAACAAACACAAGC ......:...x:.......x............:.......x.:x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 143901628 46312927 +3112 chr4 + 190214555 165521626 165521625 165521682 57 ATATATATACATATATACACACACATATATATACATATATATATGTATATATATAAA chr4 + 94230402 28997790 28997789 28997846 28997790 28997789 28997846 57 ACATACATACTTTTATACACATACATGTATCAGTCAATATGTATGTATATATATAAA .:...:....x.x........:....:...xx::xx....:................ 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 136523836 53690719 +3070 chr4 + 190214555 165539587 165539586 165539654 68 TCTCTACTAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAATAGCCGAGTGCGGTGGCA chr4 + 94230402 72184794 72184793 72184861 72184794 72184793 72184861 68 TTTCCATTTAAAGAAAAAAAAAAAAAGAAGAAAAATTAGAACCAAGGAAATAATGAAGTTCAGCAACA .:..:.:.x...:.............:........xx....xx..::.....::x:...x.:.:::.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 93354793 NA +3067 chr4 + 190214555 165546995 165546994 165547053 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 89513789 NA +3002 chr4 + 190214555 165574771 165574770 165574829 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATTCACCAAAGACAAAAAAGAACCACAC chr4 + 94230402 83765972 83765971 83766030 83765972 83765971 83766030 59 AAACAAAACAAAAAAAAAAAAAAAAGAAGGATTTCTGAAAATATAAAAGAGAATGGCAC ...x....x................:...:.x...xxx...x.:....:....:x:... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 81808799 NA +3663 chr4 + 190214555 165598024 165598023 165598104 81 TCTCTCCCTCTCTT-------CCTCCCTTCCTTCCTTCCCTTTTTTCTTCCTGCCTCCCCCTCCCTTTCTCTCTCCCTCCCTTCCTTC chr4 + 94230402 84992622 84992621 84992709 84992622 84992621 84992709 88 TCTTTCCCCATCTGACACAAATCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCCCTC ...:....:x...x-------:.......::..::....:.......:.:..x......x..x..........:.x..x:x.:..:.. 14M7I67M 59/81 72.8% 88/94230402 0.0% 7/81 8.6% 80605402 NA +3124 chr4 + 190214555 165598064 165598063 165598118 55 TTCCTGCCTCCCCCTCCCTTTCTCTCTCCCTCCCTTCCTTCTCCCCCCTTTTTTT chr4 + 94230402 56436012 56436011 56436066 56436012 56436011 56436066 55 TTTTTTCCCCCCCCCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTT ..::.x..:.....:.::...:.:......:...x:..x:.:............. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 109162052 81052503 +3471 chr4 + 190214555 165598427 165598426 165598528 102 GATGTTGAACAAGTTACTTAACCTCTGTGTGTCTCAGTTTACTTATTGGTAAAAAG----TAATAAGTAGTATTTATTTCATAAGAGTTTAGTAAAGTTTAAATAA chr4 + 94230402 83501141 83501140 83501246 83501141 83501140 83501246 106 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGGCTAAATCAA ..:x:..::...:...........x.:....:........x.::.::x......x.----.:...:xx.x..::..::...:.:.:..x.x..:.:.:.x..x:.. 56M4I46M 66/102 64.7% 106/94230402 0.0% 4/102 3.9% 82097286 NA +3041 chr4 + 190214555 165634388 165634387 165634426 39 ATATATATATATATATACACACACACACACGTATATCAT chr4 + 94230402 41650596 41650595 41650634 41650596 41650595 41650634 39 ACATATATATATATATATACACACACACACGTATCTTAT .:...............:................x.:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 123983792 66230763 +3227 chr4 + 190214555 165667410 165667409 165667463 54 GCAAAAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA .....:...::....xx.x.........::.:...............x.x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 77284702 NA +3472 chr4 + 190214555 165682475 165682474 165682540 66 GTGGTACAGGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGTATGAGAATCACTTGAACCTAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....:..x.--......:.........:x.:........x:x..x...x..........:..:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 89649274 NA +3445 chr4 + 190214555 165704027 165704026 165704113 87 TGTATTTTTTCATCGCCTCTTTTCTTCTAATTTCTAAATCAGATTACACATCTTAACCATTTTGTTTTTTCCATTCTTTTTTTTTTT chr4 + 94230402 86325989 86325988 86326075 86325989 86325988 86326075 87 TATCTTTTTTTTTTCCTCCGTATTTTTCAGTGTCTAAATCAGTTTACACATCGTAGCAATTTGCTATCTTATATCTTTTTCTTTTTT .:.x......:x.:x.::.x.x.:..::.:.x..........x.........x..:.x....xx.x.:..x:..::....:...... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 79378038 NA +13454 chr4 + 190214555 165706066 165706065 165706437 372 AGCACACTGGGATTACAAATGCAGTAATATTTCCATGCTGGTCTCTGCG-TTGTCTCTGTTGAACATCTGTGTGCTGAGAATTATCCATGCTATGTCCCTTTGACCTGTTTCATGTGAACTGTTCTGGATGTAAATTTTTTTTTTAACCATTAAATCTAAGTGCAGGGTGTGAATCACAGCTGGGCGATGATAGGTAATTGGACAGGGAACTTACTAGGGGCATGAGAGCATCAGAGATCTCAAGTTCTCAAAGGAAAGACTTTTTTCAATAAAAGCAATGTA-----ATATTGGGAGGGGATTT--------TTTTTTTTTATTTTCCTGGAGAAAGCAAGTAGAT----------------TTTTCAAGAAATTTTGTTTCAAAAACAGGCCAAATGTTT chr4 + 94230402 25083678 25083677 25084057 25083678 25083677 25084057 380 AGCACTTTGTGAGTTCAAAGGCTAAACTATTGCCAGAATGAGATTTAAACTTGTCTCTGTTAAACATCTGTGCTTTCAGAGTTACCAGTGATGTGTCCCTTTGACCTATTTCATTTGAACTTTGCTGAAAATGAATTTTCA----ACCTACTAAATCTAACTTCAGGGTGTGATTCACAGCTGGGTGATGATAGGTAATTGGATAGTGAACTCACAAGGGGCATGAGAGTACCAGAGTTCCCCTGTTCTCAAAGGAAAGA--------AACCAAAATACTGTAAATGCAAGTTGGGAATGGGTGTGGGCAGAGTTTCTCTTTATT-------AGCAAGAAAACAGTTCTTGTTGCGTGTTTGATTTACAACAGGTTTTATACC---AACAGATCAAGTATTT .....x:..x..x.x....x..x:x.x....x...x:x..:xx.:.:x:-...........:..........:x:.x...:...:.x:..x.:..............:......x......x.x...:.x:.:......:x----.x.:.:.........x.x..........x...........:.................:..x.....:..x.............:.:.....x..:.xx................--------..:x...::.x....-----.x:......:x..:.x.--------...:.:......-------..x...x..::..x.----------------...x...x.::....:.x:.---.....::...:.:... 49M1I91M4D115M8D15M5I17M8I12M7D15M16I20M3D16M 262/350 74.9% 380/94230402 0.0% 52/350 14.9% 140622388 49592167 +3083 chr4 + 190214555 165721021 165721020 165721069 49 AATAGATAAATGTGCATTATATATATATATATATACACACACACACACA chr4 + 94230402 74671059 74671058 74671107 74671059 74671058 74671107 49 AATATACAAAAATTAGCTGTATATATATATATATACACACACACACACA ....x.:...x:.xx::.:.............................. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 91049962 NA +3246 chr4 + 190214555 165721029 165721028 165721067 39 AATGTGCATTATATATATATATATATACACACACACACA chr4 + 94230402 30834198 30834197 30834236 30834198 30834197 30834236 39 AATATGTATTATATATATATATATACACACACACACACA ...:..:..................:............. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 134886831 55327724 +3001 chr4 + 190214555 165721035 165721034 165721074 40 CATTATATATATATATATATACACACACACACACACATAT chr4 + 94230402 41650590 41650589 41650629 41650590 41650589 41650629 40 CATTAAACATATATATATATATATACACACACACACGTAT .....x.:.............:.:............:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 124070445 66144110 +7811 chr4 + 190214555 165732080 165732079 165732313 234 ATATGTTATTGCTTTGC----AAAACTCAAATCCTGTACATTTGTCCTTGAATATGACAGTAATGTA-----TAGTTTATTTT---------CCAGATGGAGAAAGTCTTTGTCATA-------AAAATCAATAACTTTAAA---ATGTATATATTAGTTAACA------GTAACTTGGAAGTGATTCA-------------AAGGAAAAATAAAGCTATTTTCACCA----TTAGTAAGTCCAAGGGACTCATAAAACTTTCAGTGGTGTTTGAATCAAAATAT chr4 + 94230402 25100719 25100718 25101003 25100719 25100718 25101003 285 ATGTGTTATTGCTTTCCCTCTAACAATTTAATCATCTATATTCACCCTTGAATTTGACACTAATGTAAACAACAATTTTTTTTTTATTTGCCCTAGATGGAGAAAATCTGTTTCAGAGAATTAAAAAGTAAATTTCTTtaaataaataaataaataaaataaaataaatCAAAACTTGGATTTGATCCAGGCCaaaaaaaaaaaaaaaaaaaaaaGCTTCTGTCATTAGGAGTTAGTAAGCCCAAGGGGCCCATAAAACTTTCAGTGGTGCCCAGATCAGAACAT ..:............x.----..x.x.:x....x.x..:...:::........x.....x.......-----:.:...x....---------.:...........:...x.x...x.-------...:.x...xx.......---..:x...x..x.:x...x.------:x........xx....:..-------------..::.....x......x:.x...::.----........:.......:.:...................:::::....:..:.. 17M4I46M5I11M9I25M7I18M3I19M6I19M13I26M4I53M 178/234 76.1% 285/94230402 0.0% 51/234 21.8% 140631361 49583194 +16111 chr4 + 190214555 165740819 165740818 165741309 491 CAAAGGAAAAAAAAAG------------TAAGGAGAAAACCTATGTTAAATAATG-----AAATATCTAACTGTAGAAATGT------------------TTTTAAAAGTAACATTGTTCCTTTAAATTTAATGCTGACCACAATGCTTTGTAATTTTCCTTACGAAAACTGGATTTTCCCAGCATGACACCCAGTGCTGGC-ATCAATATCAGACGCTTAAAAA------TACTCATGCCAAGGAGTTAACAGG-AAATATCTTGGCAAATTCAGAGTCCAAAGGAAAGCACAAAATTGTCAGAACGCATATCGTGTTT--CTCAGAATTATCTGTATCATGTTGGAAGTTTTTATACGGAAGTGTGTGTTGACACAAATGATTAAGGCCAGGATTCCTACAATTGACAGGAAAATGACCTATAAATAATGACCTCTGATGGACTTGTCATGCAGTCATTAAGTGAAATATTCTAGTACCAGTTTCCTCTCTTTGGTATCCCAGTTTCCGGCTTCTGTGAAGTACTTTTCCTTTG chr4 + 94230402 25104909 25104908 25105428 25104909 25104908 25105428 520 CAAAGACAGAAAAAGGGAAAATGTGTATTGAAGAGCAAAACATTAGTAAATAATATTCAAAGTTCGCTTAGAGTAGAAATGACGttataataaaattatattttaaaaata----ttttCCCTTAAGCTTCTTGCTGACTA----GCATTTCAGCTTCCCTGAGGCT--CGGGATCTTGCTAAAGAAACACCTTTTGCTTGTTGTTTGTAACAGGAG----AAAACAGTGTTATAAACTCCAAGGAACTATTAGGGAAATCTCTTGGCAGTTTCAAAGTGAGAAAGGAAGCAAATCATGGTCATA-TGTATCTTTTGTCCGGCTCAGAATTATCTCTATCGTGTTGGAAGTTTTTATTCGGAAGTCTGTGTTGACTCTCATGATTAGGGCCAGAAATCCTACAGCTGACAGGAAAGTGACCTATAAATAATGATCTACGATAGACTTGTCATATAGTCATTAAATGAAATATTCTAGTACCCATTTCCTTTGTCTTGTTTCTCATTTTCCATGTTCTTTAAAGT-TATTCCCTTTG .....:x.:.....:.------------.:.:...x...x.xx.:x........:-----.:x.xx..x.xx.........x------------------........:..----.x....:....::..xx.......:.----..x..x:.::..:...x.x.xx--.x....:..x.:.:x:x:.....:xx....x.:-:.:x:..x...:x.----....------..:xx.:x.......::..x:...-....x........:x....:...xx:..:.:.....x.xx..x....x.-:.:..x.:x...::--.............x....:................x.......x.........x.xx.......:......:.x.......::..........:.................:..x:...:..........::.........:.................x:......:.x.:.x..x..:..x.....:xx....x.:....-:x..:...... 16M12I27M5I22M18I11M4D26M4D22M2D33M1I14M4D4M6I24M1I49M1D14M2I202M1D11M 348/475 73.3% 520/94230402 0.0% 61/475 12.8% 140635910 49578645 +14188 chr4 + 190214555 165766020 165766019 165766345 326 CACTTATTAGTAGGAAAATGTTCTGCCCTGCCC------CCTGAGTCAAATACCA-TCTTCCGTGGGCTTTTGTGACAAGATCTTAATGGAGCCTTTGGATTATT--ATACACTTTGGCCTAAGCAAGTGAATGACCG-CTAGGTCTGTTCACTGACTTCAAATCACATGTTATCAGTGAAACCTTCACTGCTGGGTTTCCTTTCATTGTATCTCCAGGCTGACCGTTTCCTGTCAATGTCCTTAGAACGGAGAATATACTGAAAACTAGGGTCAGCCACTCAGCCGCTAGCGCTGCACTC-TGGCTTTGGAAGATAAA---GTCATTTTTATTTTGTTT chr4 + 94230402 25119796 25119795 25120135 25119796 25119795 25120135 340 CATCTGATGGTGTGAAAGTACTCTGCCTTCCCTGCCTTGCCCACGTCAAGCGTCAGTCTTCCACATGTTTTCGTGACACAGTCTTGTAGGAGTCAGCAGAGTGCTGTATAGACTTTGGCCCGAACAGCTGGATGACTGACTGAATCTGCTCACTGAATTCAAATCACATGTTATCAGTGAAACCTTTGCTGCTGTGTTTCCTTTCATTGTGTCCTTAAGCTGACCATTTCCTGCTCATGTCCTTTAAGCAGAGAATATACAGAAGATCAGGGTCAGCCCCGATGCTGCAAATGCTTCACTTATGGTTTGAGAAGATAAAGCTGTTGTTTTAATAATGTTT ..::.:x.:..:x....:.::......:.x..:------..::x.....::::..-......:::x.:...:......x::....:xx....:.xx::..x.::.--...x.........::.:..:x..:.....:.-..:::....:.......x.............................::......x...............:..:::.:.......:.......::x........x:.:.:..........x...:.::..........x.xxx..:..x.::...x....:-...:..x:.........---..::....x..xx..... 33M6I16M1I49M2I31M1I162M1I17M3I18M 235/326 72.1% 340/94230402 0.0% 14/326 4.3% 140646224 49568331 +3044 chr4 + 190214555 165772503 165772502 165772552 50 GAATTGTGGAGTTATAGTTTATCAACACTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 69822273 69822272 69822322 69822273 69822272 69822322 50 GAATTTTTCAGATATATTTTATTAACATTCTCTTTTTTTTTTTTTTTTTT .....x.xx..x....x.....:....:.:.:.................. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 95950230 NA +3346 chr4 + 190214555 165779249 165779248 165779338 90 CTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGACAGAGTCTC chr4 + 94230402 69568192 69568191 69568283 69568192 69568191 69568283 92 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTTGGCTG-GTCTC .....:..x:.x..---..x....:.:....x.:...::::.x::.::....:.:x:...xx.....................:.x.-..... 14M3I70M1D5M 63/89 70.8% 92/94230402 0.0% 4/89 4.5% 96211057 94003498 +3108 chr4 + 190214555 165779264 165779263 165779344 81 TCTTTCTTTCTTTCTTTCTTTCTTTCT------TTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGACAGAGTCTCACTCTG chr4 + 94230402 90152599 90152598 90152685 90152599 90152598 90152685 87 TTTTCCCAGCCTCTGTTCCCTCTTCTTGAGCCATTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACTGTG .:..:.:xx.:.::x...::....::.------.....:....::.:.....:.x..............x..x::.:.:.....x.. 27M6I54M 55/81 67.9% 87/94230402 0.0% 6/81 7.4% 75626665 NA +10271 chr4 + 190214555 165783463 165783462 165783921 459 TTTTTCTTTTTACAGTTTTATAGTTCAGAGTATTTGATATTGTTTTAAATAGAATATATGCTATTATAAGATATAAGCATTTAACTAGACTTTAAAAATGCTTTTTTAACAACTGAACCTCCCGTCAAGTTTACACCAATAACTGTCAAAACAAAAAGATGGTCTAAGA-----------------CTCTTTTTGTGCTGTTAATTCTTTTTAACTTCCTGACTTTT-GTGGCTGTTGTTACTCTTAGGCAGGATTATCACGGTGTAACATAAATAAGAGATTAA------------------CTTTACAGTCACTCTCCATT-CACCAT--AAAACTCCTTGACCTACTCAAGTCCAGTAGGGTCAGCGTTTTCTTTGGCCAGCTTGAGTGGTTGGCTTTGGGACTGTGGGGCTCACGCCATGGAATACTGTCAGCACAAGGGATATCCTTTGGAAAATAACAA------------AAACTCA---CTCTCTCACTTTTTTTTTTTCCTTTG chr4 + 94230402 25127910 25127909 25128406 25127910 25127909 25128406 497 TTTTTATTTTAACACTCTT----TTAACAGTGCTTAGAATGTCCTTCAACA---CATGCGTTGCT----GATATCAAAAGTTCACTG--CTTTAGAAGCATTTTATTAAGAACTGTGGCCTTCAC--ACTTTGTATTGCTATCTGCCAAAACAAAATGACAATCAAATAATTCTCCCCCACACCCTTTTTTTCTGTCCTTCCAATT-TTTTAAACTTCCTTACTTTTCATTATTACTGTTGCTCTGAAATGACTTTATCATAGTGGAACATAAACAAGAGATTAGGTATCTCATCTGGATTAGCTTCACAGCCTCTCTCCTTTTCACCTCCAAAAGCTCAATGACCTGCTAAAATATGGTATCAGCTGAGTTTTCTTTGGCCAGCTTGGCTCTCTTGACTTGACACTAGCAAGATCAAGCTATAGCAGACAGTCAGCATAAGGGATATCCTTTGAAAAACAGAAGTTTTTCTTCTTTAGAGTCAGACCTTTTTCTTAACTCTTTTCTCCTTTG .....x....x...x.:..----..x.x...::..::x..xx::..x..:.---:..::.:.::.----.....x.:x.x..x...:--.....:..::::...x....x.....x:x.:::.::--.x...::.:::x..x...:..........x..:::..x..x.-----------------:.:...:...x..x::....-....x........x......-:.x::.::....:....x.:::::xx......::...x........:.........:------------------...:....:.x......x..-....x:--...:...xx......:..x..:.x::...xx:x.x.x...................:x.xx:.x.x:...:x...:xx::.x...x..:..:.x.x..x.......:...............:....:.:x.:------------.:.x...---..:.:..x:xx:.:....:....... 19M4D28M3D11M4D18M2D36M2D42M17I20M1D20M1I57M18I20M1I6M2I133M12I7M3I26M 295/443 66.6% 497/94230402 0.0% 70/443 15.8% 140655553 49559002 +7900 chr4 + 190214555 165830100 165830099 165830312 213 TGACTAAACTATCAGACCAAGTCACACTGTCCCATGCTGTGATCAGCAAGAAGATAAGGTCTTCACCATCTGTTCTCTGGGGGTCTTGAGTTTAAATCTCAATGGGAGACTACTGCAGGATGCCAGGGGAAAGGAAAAGGTAA--TTTGGAAATTTTGCATTTTTTATGCCAAAGCAATAAGGATTCTTACATATATTTATTT--ATAAGAACAGAT chr4 + 94230402 25136820 25136819 25137032 25136820 25136819 25137032 213 TGAGTACATTATCAGACAAACCTATATTGCCTCATGCTGTGACTGGAAAGCAGATAAGGTCTTTGCCATCTGT--TCTGAAGGTCCTGAGTTTAATTCTCCATGGGAGTC-AGTACATGGTGCTGGTAGGAGGGAAGGAGTACGTTTGGGAAACTGCTTATCTTTTGT-TTGGAGAAAAAACAATTTTTACATAAGATTATTTTCATCAGAAGAGAT ...x..x.:........x..x::.:.:..:.:..........:::.x...x............::........--....::....:.........x....x.......x.-.x.:..x.:...::.x:.:.:....:::...x--..x.....:.x:x:..:....:.-::::..x..x..x:...:.......x:x......--..x....x.... 73M2D35M1D32M2I23M1D34M2I12M 149/209 71.3% 213/94230402 0.0% 8/209 3.8% 140693280 49521275 +4542 chr4 + 190214555 165855351 165855350 165855482 132 TCCTATGACATGATGAA-AACACAGTTCTGTGCATAAGACTATTACAAAGCAATGCTGACACCTACAGAGAATGTATGCAAATATCCAAGTTT--AATTGGTATATGCTTTACTGACTGGCATTAATACTTTGAA chr4 + 94230402 25151732 25151731 25151860 25151732 25151731 25151860 129 TTCTTTGAGAAGAAAAATAATACAGTTCTGT--ATAACAATAT---AAAGCAATGCTGACACCTACAGAGAATGTATGTAAATAT-CAACTTTAGAATTTGCATTTTCTGTGATAATTCCCAGAAATACGTGGGA .:..x...x.x..x:..-..:..........--....x.x...---................................:......-...x...--....x.:..x.x..x.:x.:.:.xx..xx.....x.x.:. 17M1I13M2D10M3D39M1D7M2I40M 99/126 78.6% 129/94230402 0.0% 9/126 7.1% 140703619 49510936 +3139 chr4 + 190214555 165864406 165864405 165864461 56 ACTTCTGGTTCTCACTAGAGGTCGCAGGATGTCAAAAAACTGAC--CAGCCAACAGGG chr4 + 94230402 25154486 25154485 25154543 25154486 25154485 25154543 58 ACGCTTGGTTCTCACTAGGGGTCGCAGGATGCCAAAAAATCGGCATCCGCTAGCTGGG ..x::.............:............:.......::.:.--.x..:.:.x... 44M2I12M 44/56 78.6% 58/94230402 0.0% 2/56 3.6% 140709920 49504635 +3413 chr4 + 190214555 165866526 165866525 165866597 72 TCTGTTTTCAAGATCTCTTTCTTTCTCTCTCTCCCTCTTCTTTTTTTTTTTT-TTTTTTTTTTTTGGTTGTCA chr4 + 94230402 84739514 84739513 84739586 84739514 84739513 84739586 73 TCTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTTGACTGTCA ...x..x....:x.:.......:..:..x::.x..x.:...:.:......x.-.............::..... 52M1I20M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% 81127012 NA +3147 chr4 + 190214555 165866531 165866530 165866575 45 TTTCAAGATCTCTTTCTTTCTCTCTCTCCCTCTTCTTTTTTTTTT chr4 + 94230402 68982947 68982946 68982991 68982947 68982946 68982991 45 TTTCAAGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ........x:.:.x..............:..:..:.......... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 96883584 93330971 +9897 chr4 + 190214555 165873068 165873067 165874057 990 TGTTTGTCTAAGGCTATCAAAAGAAGTCAAGAGAGGAGGCTGTGGTCCGGATCCTGACCCTGATTGTATGAATAAGTAAGCAGGATGCAAGTGAT-TGGGTTAGATGGTGCGAATATTTTTTTTTTTCAAGTTA---------GGAAGAGGGTAA--------AAAGACAGGCTGGCGGGGGGAAGGCAAACAGTGCATCCCCAAATCCTCACACTTTTGCTCTCTTGCAGTCAGTTGCTTTGCTGGCTTCTGCAGGCTTTTAAGGTCTCGCGGCGTAG--AAATGCCTGGCCCCCACCCCCTT-------CCTCGGTC------------------TCCCCTTTCAATTCAGATGT--GCTGATGTGCAGACCGGATTCATCTTCTCGGAGCTGCGGCGGCGGCTTTGGGCTCAGGCGGCGGCGGCTCGCGCTCGGCCGCGGAGTCCTGGCAGCAGCGGGGACGCGGCGCGGGAGTCCGAGCTCTGGTGGCAGCTGAGCCCGCGGGGCGCCGCTCGCCGAGCCGCGGCCGCGGGAAGTTCGGC-------------AGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGAGCCGAGTTTGCCTGCGCCCTCCCCGCCTCCGAGTGCAGAGTTCCTTACCTGCCCTCCG-----CCCACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGACTGGGGGTAAC-AGGCAGTGCTTGCCCTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGGACACCTGAGCA---CCCCGGTCCCGCCGAGGAGCCTCCGGGTGGGGAGAAGAGCACCGGTGCCCCTAGCCC------CGCACATCAGCGCGGACCGCGGCTGCCTAAC--CTCTGGGTCCCGT-CCCCTCCTTTTCCTCCGGGGGAGGAGGATGGGGTTGGGAACGCTTTCCCCGAGGATGCTCGTGTGGCTGGTGGCCTCGGGGATTGTTTTCTACGGGGAGCTATGGGTCTGCGCTGGCCTCGATTATGATTACACTTTTGATGGGAACGAAGAGGATAAAACAGAGACTATAGATTACAAG chr4 + 94230402 25163405 25163404 25164326 25163405 25163404 25164326 922 TGTTGCTGTAGGACTATCGGGGGA------GCGGATCGGCAGCAGCCCGGATCCTGACCCTGCCTGTATGAATAAGTAAGCAGGGTGCTGACGATGTGCGTTAGTTGCCTGTAAGGTTGTCGT-----AAGTTAAAGGGGGACGGAGGAGGGGGGGTTAGATCAGAGACAGA---GCGCAGAGTAGGAGCGCGGCGGGGG---AGGCCCTGACACTTG-GCTGTGCCGCCTCCCATCGCTCGA------GCTGCGCGCTTT-----------GCCGGAGCTAGACCCCCCACCCCCGCTCCCTTTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCCGCGGCAGTTCGCTGATGTACAGCCCGGATCCATCTTCCGgcagcaccagcagcagc----------agcggcggcggcaacagcGGGACCGggg-------gcggcggcgcgg-cggggcgcggg---ccgggcgcgg-----agcggggcgcgagcagcggccgccgccggg--------gcgggAAGTTTGCCCGGGCTGCGCCGGAGGCGGGGGGACGCCC----------CGAGAGCCGGCACCTCCCG----------GCCTGAGCCCACCCC-------CGCGCCCAGCCACCCACACGCCCGGCGGGGTGCGGGCAGGAGGGGC---GGCGGAGCTCATGCTGC--CTGGGGCTACCTAGGGAGCAGCGGCTCTAG-----GTGCCGAAGGaaacaaa-------caaacaaacaaacaaaGCCCCAG--CCAACTCCAAACTTGCGGTT-------------CCTCCATCCCTTACCCTCCTTTCTCAAGCCGGCG-GAGCCGC--CCGCCTAACTCCGCTGCGCTCCGCGCACCGCCTCTCCGCCCGAGGGAGGA---------TGAAAATGCTCTGCTGGCGGCTGGCGCTGTGGCTGGCCGCCTGGG------CTGTCTGTGGGAAGCCGTCCTTCTGCTCTGCCCTCGATTATGACTACACTTACGATTTCACTGAAGAGGATAAAGCCGAGGCGATAGATTATAAG ....xx.x..:.:.....::::..------.x.::xx...x.::.:................x:....................:...x:::...-..x.....x..x:xxx..x:..x.:x.-----......---------...:.....x::--------.:......:---...x:.:.x...x:x:.:.:.x:xx---.:::...x......x-...x.x::..xx:.x:.:...:x:------x....:x.....-----------.x..x..--.:.:x..:x:.....:.:.....-------.x..x...------------------.:....:..xx:x.:.xx..--........:...x......:.......:x.x...xx.:..:..:..----------:...........xxxx..xx.:...x..-------..:..:...x..-..x........---...:..x.x.-----...x.:..x..x.x:...x.xx:.....:.--------..........:.x.-------------..x.:.::.....x..----------....x...:..:..x..x.----------.....x....x....-------x.:..xx..::x.::..x:....xx..-----.xx:.xx.x...x.---:..x:.x:..x:x....--......x..x.-...x..::x:x..:..xx-----..x...:x..x.x.x.x-------.::...xx::.:..---....:.--..:x.xxx:.:.:.x...x.-------------..xx:::....x:...------.x..x::.:...-.::....--.:.......--.x...x.::...:-.x..x...:.:.x:...:.......---------..::..:...:.x.:x.x..x..x:xx.........:x....x..------:.x...::...:...::.xxx.....x...x............:.......x:...xxx.x:............:.x...:.x........:... 24M6D65M1I27M5D6M9I12M8I9M3D25M3D15M1D24M6D12M11D7M2I23M7I8M18I20M2I46M10D28M7D12M1D11M3D10M5D30M8D14M13I16M10D19M10D15M7D27M5I14M3D17M2D11M1I18M5D17M7D14M3I6M2D20M13D16M6I12M1D7M2D9M2I13M1I25M9D45M6D95M 561/844 66.5% 922/94230402 0.0% 224/844 26.5% 140709663 49504892 +3777 chr4 + 190214555 165877688 165877687 165877866 179 CATACCCTTCCTTCTCTTCTCTCCTTCTCTTCTTCCCTCCCT-----TCCATT---CCTTGCTTTTTTACTTCCTTCCCTTCTT----TCCCTTCTTCTTTCTTT-------TTTTTTTTTCTTTTTTTGTATTTACGGG---AATATTAAGAAAGCTCAGGCAATTGTAAATAGAA-------------TATCTAATAGGAGAAATTGAAGAA chr4 + 94230402 53764531 53764530 53764743 53764531 53764530 53764743 213 CAAACTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCAGACTCTAATGGTAACTTTTTACCCAGTTTGGCATTTCCAGGCCAAGCCTCCAGACAGCTCCTGGCATTGT-CATAGAAAGGACTCCTTCAGTATTTCATAGGGAGTACTGTAAAA ..x..::.x.:..:..::........::..::..........-----:.....---........:.:...:.::.::.x.....----........:.xxx..:.-------x:.....x:.:xx...x.:....x.:..---.::x.:x...x.....xx.xx.....-x......-------------...:.x.....:::x.:..x.:.. 42M5I6M3I28M4I17M7I28M3I26M1D7M13I24M 121/178 68.0% 213/94230402 0.0% 36/178 20.2% 112113157 78101398 +3068 chr4 + 190214555 165877714 165877713 165877795 82 CTCTTCTTCCCTCCCTTCCATTCCTTGCTTTTTTACTTCCTTCCCTTCTTTCCCTTCTTCTTTCTTTTTTTTTTTTCTTTTT chr4 + 94230402 69568192 69568191 69568273 69568192 69568191 69568273 82 CTTTCCTTGCTGCTCAGTTATTTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTTT ..:.:...x.:x.:.xx::...:.:.x....x.:x..:.::.x:..::.....::x....xx..............:..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 96309522 93905033 +3545 chr4 + 190214555 165919252 165919251 165919334 83 GTGCACCTGTAGTCCCAACTACTTGGGAGGCTGAAGCAGGAGGATCACTTCAGCCTGGGAGGTCAAAGCTGCAGTAAGTGGTG chr4 + 94230402 76033204 76033203 76033286 76033204 76033203 76033286 83 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ......x......:...:.......::.......:x.xx.x.:.x.....x.:..::.:..x.:x::....:..x.x:..:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 89886048 NA +6792 chr4 + 190214555 165927268 165927267 165927632 365 TGTAGTAATACTGAATTGCTGGTTCTTATGCTT--------------AATACTGAGCAAGGAACTTTAAGTTTAA-AGTCAAGCTAAAGTAAAAATTATTAAG---ATTATCTTAAGAACTTGTTAAATGTGTTTAAATTTTTTATGAACTGGAAG------TTTTAGT-----TAGTTTTTTTCCCTTTAGC----TGTTGCA-----TTAGCAGCCATAGACCAA------GTGACAACATCGTTGTTTTT-AATAAAACGGATTAATAAAAATGTAAGAGGATTAAGCATTTCAGGTTCTGGCTTCTATGCTTAATATGAGAGTATTGGTTTGAAGCCAGTGTGCCATACATGCTAATTGATTGCTACTTTGCTTGAAGTAATGTA-----GAAGATTATCTCC-TGTAAGAT chr4 + 94230402 25195197 25195196 25195607 25195197 25195196 25195607 411 TACAGTATTATTGAGTTAAGGATTCTAATGCTAGATGATAATGGAAAAATACTG-TCAAGTAAGTTT--GTTTAAGAGTGCTGATTAAGAAAACCTTTCTAAGTCTGTTGCCTTAAGGCAACATTTAAAGTGTCTTTATTGTCCTTGTAGTAGAAAATGTAATTTTAATGAACTTAGTTTTTATTTGTCAAGCACGAGGTCTCACCTGCTTGATATCCTTAAGGAAAAATGTAGTGGTATCGTCATTATTTTTTAACAAAATGGATTAATAAAG-TGTAAGAGGATCAAGCATTTTAGCTTCTGGCCTTTACACTTAATTTCAGTATACTATTTTGGAGCCTGAAAACT-TATATGCTACTTTTTCATGGTTTGCTTTGAAGTGCTGCAATTCTGGAGATTGTTTCCATGTAAAGT .::....x..:...:..:xx.:....x.....x--------------.......-x....x..x...--......-...xxx.x.x...x...xx..x:....---:..::......:xxx::..x..x....:.xx...x.::x..x.x.:...:------.....:.-----........x.::x.:x...----x..:x..-----..:::.x..x..::xx..------...::.x.:..:..:.....-..:....:...........:-...........:........:..x.......:.:..::......x.x..x:..:.:x....:....x.x:x:.:-..:......x..xx.:::x::..xx:.......:x..:.-----.:.....:.:...-.....::. 33M14I7M1D12M2D6M1I27M3I50M6I7M5I19M4I7M5I18M6I20M1I20M1D74M1D39M5I13M1I8M 244/360 67.8% 411/94230402 0.0% 56/360 15.6% 140732071 49482484 +3222 chr4 + 190214555 165929403 165929402 165929481 79 GTGGCACATGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAACCGCTTGACCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--....:.:.........::.:........x.xx.x...x.:.....x.....:..x:xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 89896202 NA +10678 chr4 + 190214555 165940613 165940612 165940941 329 TGTTCAAAAAAATGTTTCTCATTAATATGCACATATGCAAAGTAGAAATGGTTCCAAGCAAAATACCATGAGATTTT-TTCCTCCTAGATATTCCTTCCTATGTTATTGT-TAGGAAAGATATGATGAGGATATGTGACT-----TTTTCCTTATACCGTCAATTTTATTAGAGAGCAGAATGCACATGGCCAACC-TTTGTTATTTAATTTCTGGACTG-AATATGATATTGGGCAGAGCCAGACTTGCTTTCATTTGATAAGCCTTCACCATTTTGGGGGCTATTTCTTCCTAGGCTGTTCTACATTCTGCCATTTAGCTGAAAATGCCATACATT chr4 + 94230402 25201401 25201400 25201729 25201401 25201400 25201729 329 TATCTAAATGAAAGTTCATC-TCAGTGTACA---GTTCAAAGTAAGTTTTCTTCCAAACAAAACACCGTGAAATTTTAGTATTGCCAGGTATTCCTGTCTGTGTTATTGGACAGGAAAGACACGATGTGACTATTTGGCTGCTAACTTATCTGATATCATCTTTTCTATTAAAGAGCAGAGTGCACATTGCCAACCTTTTGTTATCTAGTTTCCCGAATGCGGTACAGAATCACGCTCTGCCAGACTCAGT---ATTTTGCAAGCACTCACCATTGACTTAGTTATCTCTTCCTGG--TAGTCTGCATCCTGCCACTTAGCTGAAAATGTCACACACT .:.::...x:..x...:x..-.:.:.:.:..---:.x.......::xx.xx......:.....:...:...:.....-x.x:.x.:..:.......x:..:........x-:........:.:....x.:x...x..:..-----:..x:..x...:.:..xx..:.....:........:.......x.......-........:..:....:x..x..-::..:::x..::x..xxx........::x.---....x::....x:........xxxxx:.:...:.......:.--.:x...:...:......:.............:..:...:. 20M1D10M3D43M1I32M1I29M5I51M1I23M1I30M3D42M2D40M 224/320 70.0% 329/94230402 0.0% 18/320 5.6% 140739212 49475343 +3434 chr4 + 190214555 165987604 165987603 165987769 166 AGAGAGAAATCTAATTATAGTAAAGATTTT--TCTATATGTTGAAGTGATAACCTACATTTTACTAATTTCTATTTTCTTCCTTTCTAGATTCCCACATAAATCTAACCCCTTCCTTCTTATCTCATGTCAGTT----TTGCACTGGGTAAATAATTTTATATGATAAACCT chr4 + 94230402 78246806 78246805 78246974 78246806 78246805 78246974 169 AAAAAATAAGCAAAGTAAATTAAAGATTTTAATTTCTTTTATGAAGGAAT--CCTACATTTTACTTATTACTATTTTTTCTGTCTCTAGATG-CTATAAGGTTCTCTCTGTTTCTCTGTTATGTCATCTGATTTAAAGTAAAATTGACTAAAATATTATGCACTATAAATCt .:.:.:x..x.x..x..x.x..........--.:.x.x.xx.....x:..--.............x...x.......:.::x.:.......x-.:.:.x::x...xx.:x:...::.x....x....x.x.x..----.x:x.:..:x....xx...x.::.:x.....:.. 30M2I18M2D40M1D41M4I34M 107/163 65.6% 169/94230402 0.0% 9/163 5.5% 87740798 NA +9534 chr4 + 190214555 165989304 165989303 165989498 195 ATGCTTTTCTAATTAGCTTTGTGTGTATTGATTTCACGGAAATATTTTACATTTTAATTCAACTTTTCTTTTTTTA--GCTGTATTTTGGGGCGATATTGCCTTAGATGATGAAGACTTAAATATCTTTCAAATAGATAGGACAATTGACCTTACGCAGAACCCCTTTGGAAACCTTGGACATACCACAGGTATGGT chr4 + 94230402 25223586 25223585 25223772 25223586 25223585 25223772 187 ATAGTCTTCAAATTGGTTTTG---------ATGTCAAAATAA-ATTCTTTAATTAAATTGAGCTCTTTTTTATTTAAAGCTGTCTTTTGGGGAGATATTGCCTTAGATGATGAAGACTTAAAAATCTTTCAAATTGACAGGACAATTGACCTTACGCAGCACTCCAATGAAAGACTTGGCCATAACACAGGTATGAT ..:x.:...x....:.:....---------..x...x::x..-...:.x:.x..x....x.:..:..:...x....--.....x........x.............................x...........x..:.....................x..:..xx..:..:x.....x....x..........:. 21M9D12M1D33M2I119M 149/185 80.5% 187/94230402 0.0% 12/185 6.5% 140765718 49448837 +8664 chr4 + 190214555 165991442 165991441 165992965 1524 TAATTGCTTAGGAATGAATGTATTTAAGTATTACCTCATCTTTCTAAAATGTGCAATGAAAAAATTTCAAAAATGTTTCTCAAGATGCACAGCAAAAATGTGGCCATGTAATGGAAGTAATTAAGTAGATTATTAGTCAGTGAACAAGCACTCTAACTTATTTGCCTTATAAGGACTTATTT-GATTTTTCCCTTAAGAGGCTTATATAGCAATAGATTTTATCATTTTTTTTTAGCTTCAGTCTAGGTAATTAGGTGCATCACAATTTTAAATAAAAAAATAGATATTGGAAGGAAATAGTTCAAGTGATTTGTGAATAGTTCAAGTTGTCGTCGTGGAATTATAGCTTTCTTTGTCTTAGCCCAAAGATACTCTATGAACCATAGATACTCCATGTTACTACAAATTCATAGGCACTTGTTAAGATGTCATTAGTGGCTGTATTGGTTGTTTGCTGAATGATAACTTTTTCCTATTTGTCTAATAAAAATTCAAGGAGAATAGAGAAAATAGGTGACAAAACCGAGAGTAGCATTTTATAAAAGCCCTGGAATGAAAATCTGGAGACTTGAATTATTGCCAAATGCTATGCTTTCTGACTTATGACAGGAATCTACCTTTTCTAGGTTTTGT-------TGGTAAAATTGCAAGAACACATATTGCCTTATTCCTACCGTTTCCTATTCCTTTTGCACTACAGACTTTTTTTACACTCTGTTTTTTATAAATTTTTCAAATTACACAGCGTAACAGAATATATTTTGCAGCTGAACATTCGTT---TGGATTCCTGTGGCTTTTTCCAAATTACGTTTTTGATTTCTATAAATTCAACTAAATTTTCAAAATGCAGTTGAATATATTGTTAAAATGTGATATGCTTTAAAAAGTTTTTGAAA------------------TTCATGGAAGCTTTGGAAG--AAAACATGCATTACACATTTGCTCTTCTAA---TGTTTTTATTTCCATTTGCTGATTTGGCCTCCGAAAATATTCAGT--------------------------TTGCACTGGGGAAATAGCTGGCATGCAATCAACAG--------GGCAGAACAACTTGCTGTCATTCTAT----GTAGCACTATGTGATGTCAAGGTCACAGTAAAG--AAAAATGTTTCAAATTATCAATAGATGACTCAATTGTCATGA--TGTCCA---AATAAAGTTAT------TTACATT-------GCTCTCTGAG-----------------------TCTCCCCATCCCCTTATTTTAGTTACCAACATTGGTTGCTGTAGAGTTTTTACCCCCTTCAAAGATTCATGGATATTCATAATTTCAACACTTTAAGACCACATAAAAAATGACCAAAGAGAAATCATTGTTGCCTATGACTGTTT------TTTATTTGCAAG-------AACTTTAACATATTTTGAGTTTAACTTGTTTCCTTTTATTCTTTAAGGTGGACTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCCCTCTACCAACTTATAGACAGGATAAGAAGAATTGGCTTTGGTA-TATCAATGTTTAAAGTTGCAGA-CGCTTGAC---TTGATGTACAGTAAATATT-ATACTCATAGCAGTTCAGTTTATTAAAAT chr4 + 94230402 25226418 25226417 25227857 25226418 25226417 25227857 1440 TAACTCGTTGGGAAGGAATGTGTTGAACTATTACCTCATCTATCTAAAATGCTTAA---AAAAATTTGGAAAATTTGTCTCCAGAGAGCTAGCAACTATGTGACAGTGTAATCCAAATAATTAGACACATTGTTATTCACTGAGCA-GCCCATGAACACACTTGCCTTATATGGTATGATTTTAAATTACCTCTTAAGA------------AATATATTTT----------------------CCACATA------CGTATTGAAATTTTTAATGGGAAATTAG-----GAAAGG-------TC---TGTTCTGTGG-TGGTTGGAGGTTTCG--GTGG---------TCTTTTTGTTTCTACCT---GACTTTTGGTGTTGCATGAGTAGTT--------TGAAAATTCT------CTTGTCA-TATGACAGT-------------------TACTGAATGTTAAATACAACTTACT--------ACAAACT---------TAGAAAAA-----TCTCAAAAC-----------TTTCTTAACAATTCTG-----AGGATTTATTGGGCTGTGGTGTTATCAG-TGCTCTTTCTTTGGGCTTAC---------CTGTATTTTCAAAGCCACCTGCAACCACAGCAGAATTAGATGTGAAGGTGGTG----------------------------TGTGACATGCACCTAATGTACATACTAGCTTC-AGAAATGTTGTACATTTCTTAAAATAACATGATAGATGTTAAAATCAACTATTTATTAGTTGAATTTTTATTGCTCATT---GATTACCAAAATGACACAAATATTTGCGTGTAAGGTCTCA--------TTCATTACAT-GCCAGCATGTGACAT----TTGAAAGCCTTTGAGAGTGCACTGCACATTCATTTTCATGTTGACAAAGAAAGCCAAAACTTTCATGGTATAGTCAGACATATTAAGGTGGCTTTTTTTTTGTCTGTTTGTTTTTCCTGATGAAACTTTGGGTGTTTTCTTTCACCCTTTTCTTTTCCTTTGTACAGGAATATTA--TGACATCCATTTAGGAAACTTTTGTGACAGTAGCGCTTTTAGCCATCTTATCAGTATAGCTC-AGAGAATGTCAGTGTCACCAGAAAGTAGAAAAAGCTCCAAATAATAATTAAATGATGTAATTACCTTGACTTGTCTGCATAACAAAGACATGCTGGCTTACATTTTGGAATGCATTATAGGaaaaaaaaaaaaaaaaaaaaaCAGCTAAAAATGTCTTCTTCTTCATTGTCAGGAATACTTGA---AGAACTTGTAGGCAAGTCA----TTCAGGAATGTTAA--ACTTC----CTTAAAGACT-CATAGCACTTCTTAAAGGATAATTCCCAATCTCCTCTGGCTCTGTAGTTGCTGTAGGTGTAAGTTTCCATGTTCTTAACTTTTCTAAATTCTTTCTTTTTTTCTTTTGTTTTTAAAGGTGGCTTTGGAGAGCATGGGATGTCAAAAAAACGAGGTGCCCTCTATCAGCTTATAGAAAGGATAAGAAGATTTGGCTCTGGTATTTTTACTGTTTAAATTATCAGGTTGCATGATATGATGATGTAACATGAACATTAATGATCACAATGCTTTAACATATTAAAAT ...:.xx..:....x......:..x..x.............x.........:x:..---........x:.....x.x....x...x:xx:.....xx.....:.x:......xx..:......:::.x...:...x...x...:..-..x.x:x...x:.:..........x..xx.x....-:.x..x:.:.......------------....x.....----------------------.:.x:..------:.:..::x......x...:::...x...-----.:....-------..---..x.:....:-.:...x:..x.x...--....---------.:.:.....:.:x:..:---..:x:.:x:..xxx...:::..x.:--------.:x......x------.....:.-x...x..x.-------------------.:.......x...x.x:xx.:..:.--------.x...:.---------....:...-----.xx......-----------...:x...x.:::...-----.::..:.:xx.:x:..x:x.:..::..:-....x.x::..:x.:....:---------..::x.....x.:.::x:x.-------::.:.:....:x.x.x:x.x:.:x..----------------------------..::x:.::x..:.xx.x....:x..:x:..:-.x....x..x:.x...x.x:.:x:.....x:...x..x..:x.::::.x:...::..---..:...::.:.x...:x..---:.....xxxxx...:x:xx...xx.x.:xx...:x.:...--------..x.x..:..-.::.:x......:..----.x:....::.....:.------------------......xx::.xxx.:...--.....x.x...x::.:.x.::xx.x.x.x.---..x:...x...:::.:..:.x:...xx...xxx:...:x..x:..--------------------------...:..x..::x.x..--..:...x..x.:.:x.:--------.:...x.xx:...x:x.:...::...----:....x.-.x:x:......:x.....x:x....--:....x.:.:.....x..x.x..:....:x:....::.x...--....::---..:....x:..------.......-------..x:.x.::.-----------------------x..xxxx..x:.:.:x.:..x:..::..:x.x.:x...x---...::..x..xx.xxx...----....x.:..:..x.--.:...----...x.....:-....:x.xx.xx:x..:..x..x..x:x:.:x...x..:..x.x.------.x..xx..:...-------:x::.....x.x.:.x:.x.:.xx...x...:.....:..:..x.......x:.......x....xx........:..:.....x........:..:........x............x......:.....-.x.:.x........x.xx...:-:..x...:---x.......xx:.:..:...-..:x...:.:::x..:.::x......... 56M3D87M1D35M1I16M12D10M22D7M6D28M5D6M7D2M3D10M1D15M2D4M9D17M3D25M8D10M6D7M1D9M19D25M8D7M9D8M5D9M11D16M5D28M1D20M9D20M7I26M28D32M1D57M3I19M3D40M8D10M1D15M4D16M18I19M2I30M3I45M26I16M2D17M8I26M4I7M1D25M2I42M2I6M3I11M6I7M7I10M23I39M3D19M4D14M2D5M4D10M1D45M6I12M7I131M1I22M1I8M3I19M1I29M 831/1306 63.6% 1440/94230402 0.0% 352/1306 27.0% 140765024 49449531 +10848 chr4 + 190214555 165994330 165994329 165994606 277 TTCCCTGACCAAGAACTTCTGTTTCACAGAATGTTTTAAATGTCACTGCAGGCTTGGAGCAAAACAACACAGTTAAGGGAAAAGTACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCGAGTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATATGGCCTGGAGGCGTTATTCCTTATGTTATAGGAGGAAACTTCACTGGTAAGATACTCCCAGCATGTCTGTTTTCATAAAGAAATAAAAACTATCATACAGATTAAGTGTCTATTTTTAT chr4 + 94230402 25230046 25230045 25230299 25230046 25230045 25230299 254 TTTTCTTTTTAAGGATCTCAGTT------AGTGTTTTAATTGTCATTTCAGGCTTTGAGCAAAATAATACTTCTAAAGGAAGAACCACAGTAAAATTCTCAGGGAAAAATGAGAAGAACAGATTTCCCAGAGCTGCTACATCGCGAACAGAAAGAATATGGCCAGGGGGTGTCATTCCATACGTAATAGGTGGAAATTTTACTGGTAAG---TTTTGAGC---------TTTATATGGGGAGAAAGAATATGAT-----TTACTTGTCtttatttat ..::..xx::...:.::..x...------.:........x.....:.x.......x........:..:..xx:...:....:.::xx.xx..x...........x..........:..:x..x..........:........:x....:..............x..:..:..:.....x..:..x.....x.....:..:.........---:.::x...---------..:...x:.::.x...:.x...x..-----...xx.....x.x..... 23M6D180M3D8M9D25M5D18M 189/254 74.4% 254/94230402 0.0% 23/254 9.1% 140764284 49450271 +9223 chr4 + 190214555 165995031 165995030 165995190 160 CTTTTCATTAACATCACACATTTTTTCTAGGCAGCCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTGGGAAAAGCACACATGTGTGACTTTCATAGAAAGAAGTGATGAAGAGAGTTACATTGTATTCACCTATAGGCCTTGTGGGTAAGTAGAACT chr4 + 94230402 25232190 25232189 25232349 25232190 25232189 25232349 160 CTCTTATTTCGTGTCATGCAATTCTTCCAGGCACCCAGCGCGCCATGTTCAAACAGGCTATGCGACACTGGGAAAAGTACACGTGTGTTACATTTATTGAAAGAAGTGATGAAGAAAGTTATATTGTATTTACATACCGACCATGTGGGTAAGTGCATCT ..:..xx..x:::...::..x..:...:.....x....x.x...........:.....:...x.:............:....:.....x..x..:..x.................:.....:........:..x..:x.:..x...........:x.x.. 160M 124/160 77.5% 160/94230402 0.0% 0/160 0.0% 140762841 49451714 +13974 chr4 + 190214555 166003380 166003379 166003590 211 TTTTATTCCAGATGCTGCTCCTATGTAGGTCGGCGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAGAACTGTGATAAATTTGGGATTGTTGTTCATGAATTGGGTCATGTGATAGGCTTTTGGCATGAACACACAAGACCAGATCGAGATAACCACGTAACTATCATAAGAGAAAACATCCAGCCAGGTGAGAGGC----ATAGAATGTGTT chr4 + 94230402 25241294 25241293 25241508 25241294 25241293 25241508 215 TTTAATTATAGGTGCTGTTCTTATGTAGGTCGAAGGGGAAATGGTCCTCAAGCTATATCTATTGGCAAGAACTGTGATAAATTTGGTATAGTTGTCCATGAACTGGGTCATGTGATAGGTTTTTGGCATGAACATACACGACCAGACCGAGATGACCATGTCACCATCATTAGAGAAAATATCCAACCAGGTGAGATGTTCTAATAAAAGGTTTT ...x...x:..:.....:..:...........:x.:........x.....:..x..x.....:.......................x..x.....:......:................:..............:...x.......:......:....:..x..:.....x........:.....:..........x.:----...:..x..x.. 199M4I12M 177/211 83.9% 215/94230402 0.0% 4/211 1.9% 140762086 49452469 +12908 chr4 + 190214555 166007926 166007925 166008111 186 TTATCCCTGGTTCTTAGGTCAAGAGTACAATTTTCTGAAGATGGAGCCTGGAGAAGTAAACTCACTTGGAGAAAGATATGATTTCGACAGTATCATGCACTATGCCAGGAACACCTTCTCAAGGTTGGAGTCTCAGGTTATACCTTTTGACTTTTAATTCCTTTCCTCCATGTGGCTCCTCACAAA chr4 + 94230402 25243250 25243249 25243435 25243250 25243249 25243435 186 TTATCAATCATCCTTAGGTCAGGAATACAACTTCTTGAAGATGGAGCCTGGAGAGGTGAATTCCCTTGGGGAACCATATGACTTTGACAGCATCATGCACTATGCCAGGAACACCTTCTCAAGGTTGGAGTCTCAGGTTATACCTTTTGACTTTTAATTCTGTTCCTCTCTGTGAATGCTAAAAAA .....xx.x:.:.........:..:.....:..::...................:..:..:..x.....:...xx......:..:.....:.....................................................................:x......:x....:x.x..x.x... 186M 157/186 84.4% 186/94230402 0.0% 0/186 0.0% 140764676 49449879 +14187 chr4 + 190214555 166014415 166014414 166014703 289 TTTGCTTCTGCTTTTTTTCAGGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGATGTCCAGGTATTGCACTAC--ACAAACACA-AGAGCATGACTGTACTTGATTG------TGCTCTTCCAGATGAATAA-GCCATGATTTACTCAACTG-TTTGTTTGTCTCCCTCCCTGTTGGCAAGTGACGTGTACAGTTCAAAGTCAGTAATCATAAAA chr4 + 94230402 25246131 25246130 25246429 25246131 25246130 25246429 299 ttttatttttattttttttaGGGGCATGTTTCTGGATACCATTCTCCCTTCCCGTGATGATAATGGTATACGACCTGCCATTGGCCAGCGTACCCGTCTAAGTAAAGGAGATATTGCACAGGCAAGAAAGCTGTATAGATGTCCAGGTATTGCACCACAAACAAACAAACAACACATACTAGTAATTGTTTGACTTCATTTTTTTCAAGAGGAATAATAGTATCTTTGAGTCAGTTGCCTTATTAGTCTGTTTCTGTGTTGGCAACTGATGTAGGCAGTAGAAGAGCTG-AATCATGAAA ...xx..:.xx.......:.....x.......................:.................:.....x.....x.....:.....x...........:...........:........................................:..--.......x.-.:x:...:x:x...x...x...------.x:.:...x...x......-:x:..xx..x.x...::..-:..:..x....x::..:x.........x...:..:x:....xx..::x.x.-......:... 158M2I9M1I22M6I19M1I19M1I51M1D10M 228/288 79.2% 299/94230402 0.0% 12/288 4.2% 140768284 49446271 +3060 chr4 + 190214555 166022111 166022110 166022181 71 ACTACTAAGTTGATTCAACATCTTTTTATTTCTTTCTTTGCCCTAAAGATTCCTTTTCCTTTTTTTTTTTT chr4 + 94230402 42075866 42075865 42075933 42075866 42075865 42075933 68 ACTAGTAAG---AATCAACAGTTTTCTGGTCCTATCTATTCCCCAAAGTTGCCTTTTTTTTTTTTTTTTTT ....x....---.x......x:...:.:x.:..x...x.x...:....x.x......::............ 9M3D59M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% 123946245 66268310 +9696 chr4 + 190214555 166025297 166025296 166025439 143 TATATTTTTTTCCTTTCAGCATGTGGAGAAACTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGCTACCCTTCTTACACACACTGCATCTGGAGAGTTTCTGTGACCCCAGGGGAGAAGGTAGTTTA chr4 + 94230402 25251833 25251832 25251975 25251833 25251832 25251975 143 TGTATTTTGATTCTTTCAGCCTGTGGAGAAACACTGCAGGAATCTACAGGCAACTTTTCTTCTCCAGGATTTCCAAACGGTTATCCTTCCTACACACACTGCATATGGCGAATCTCTGTGACCCCAGGGGAAAAGGTATTTTA .:......xx.:........x...........x..:..:.....:.xx......:....:..............x..:..:..:.....:..............x...x..:.:.................:......x.... 143M 119/143 83.2% 143/94230402 0.0% 0/143 0.0% 140773464 49441091 +8299 chr4 + 190214555 166039319 166039318 166039444 126 TGCTTACCTCCATTTTGCAGATTGTTTTAAATTTTACAACGATGGATCTATACAAGAGTAGTTTGTGCTGGTATGACTATATTGAAGTAAGAGACGGGTACTGGAGAAAATCACCTCTCCTTGGTA chr4 + 94230402 25260827 25260826 25260950 25260827 25260826 25260950 124 TGTTCTCCTCTGATTT--AGATTGTTTTAAACTTCACCACGATGGACCTGTACAAGAGCAGTCTCTGTTGGTACGACTATATTGAAGTAAGAGATGGCTACTGGAGAAAATCACCTCTGCTTGGTA ..:.:x....::x...--.............:..:..x........:..:........:...:.x..:.....:....................:..x....................x....... 16M2D108M 105/124 84.7% 124/94230402 0.0% 2/124 1.6% 140778492 49436063 +8888 chr4 + 190214555 166042021 166042020 166042149 129 TTTTAGGTAGATTCTGTGGGGACAAATTGCCTGAAGTTCTTACTTCTACAGACAGCAGAATGTGGATTGAGTTTCGTAGCAGCAGTAATTGGGTAGGAAAAGGCTTTGCAGCTGTCTATGAAGGTAAGT chr4 + 94230402 25262741 25262740 25262869 25262741 25262740 25262869 129 TTTTAGGCAGGTTTTGTGGTGACAAACTGCCAGAAGTCCTCGCGTCCTCTGACAGCAGGATGTGGATTGAGTTCCGTAGCAGCAGCAACTGGGTTGGAAAAGGCTTTGCAGCAGTTTATGAAGGTGGGT .......:..:..:.....x......:....x.....:..::.x..:x.x........:..............:...........:..:.....x.................x..:.........::.. 129M 107/129 82.9% 129/94230402 0.0% 0/129 0.0% 140779280 49435275 +18014 chr4 + 190214555 166043255 166043254 166043757 503 ATTTTTTGGCTTTCTTCAGCGATCTGTGGAGGTGAGATACGTAAAAATGAAGGACAGATTCAGTCTCCCAATTATCCTGATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGCTACCACGTCGGGCTGACCTTTCAGTCCTTTGAGGTAAAGTCTTTTAGGCTATCTTCCTGGCAAATATTCTC----CATAAACGACAATGGCATTTAAGAGAATCCTCATTAAATCAGCAAAGAAACAGAGAGTCAGCCTTTTAATCAGCAAAGAAGCAAAGGATCGCTCATAAAATGCAACATCAAGAG--CAAAAGGGTTTTTTTT--CTTCTTTCCTCGTTTGGAGACGTTTTCAAGAAGATTAAAGTGAGTTTACATTATCTGTGCTATTTGAATTAGAATGTTTGAAGTACTGACAATAGTTTC-TTTTGACAAATGCACAGGCTTATTTCACAAG--------AGTGTCC-ATTAAGTAATAGAACTTTTATTTCTCTTCTAAA chr4 + 94230402 25263884 25263883 25264370 25263884 25263883 25264370 487 ATTTCATGCTTTTTACCAGCGATCTGTGGAGGTGAAATCCACAAAAACGAAGGCCAGATCCAGTCTCCCAATTACCCTGATGACTACAGACCAATGAAGGAATGCGTGTGGAAAATAACAGTGTCTGAAAACTACAATGTCGGATTAACCTTTCAAGCATTTGAGGTAAACTGATTTAACCTAACT---CAGAAAACGATCTAGTTGGATAAATGGCAGTGACGTTAAAGTGAAATCCTTTTAAACCTGCGAGGGAA-------------TTT-----------------ATGAATTCTCTATGACAAATAACATCCAGAATCCAATTCAGCTCTCCATGACATCTTCCTTTTTTTGCAGAAATTTTCAAGAAGATTAAAG-GTCTTTATATTATCTATGCTATTTGAGTTGGAATGTTTCAAGTGCTGGCAATTGTTGCGGTTTAACAAATACATAATCCAGTTCAGCAAGTCTGCTTTAATATCCTGTTAAATAACAGGGATTTTGTATCTTTGCTGAA ....:x..x:...:x:...................:..x.::.....:.....x.....:..............:...........:x.x..:.....:.....:.......................:.:....x.:.....::.:........:x.x...........x.xx....:x...x..---::.x...::x...x----x.....:.:..:..:.:..x...x...x:.::x.....:.x..:.:.:..-------------...-----------------.x.:..:x:::..:.x.x::......x...:--...xxx:.:.:.::x.--.x....:.:.:x....x...x:..................-.xx....:.......:..........:..:........x....:...:....x...x.-x...:......:..:.:x.:x:..:x:....--------.:.:...-:....:...:..::x....:.x...:.x..:.. 186M3D14M4I50M13D3M17D31M2I16M2I40M1D58M1I31M8I7M1I33M 340/469 72.5% 487/94230402 0.0% 52/469 11.1% 140779371 49435184 +3122 chr4 + 190214555 166051229 166051228 166051295 67 TCTCTTTTCTTTTTTCTCTTTTTTCTTTTTTCTCCTCCCTCCCTCCCTCCCTTCTTTCTTCCCTCCC chr4 + 94230402 3808091 3808090 3808157 3808091 3808090 3808157 67 TCTTTTTTTTCTTTCCCCTTTTTTCTTTTTTTCCCCCCCCACATTTTTGCACACTTCTTTTCCTTCC ...:....:.:...:.:..............::..:...:x.x.:::.x.x:x...::..:...:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 162243138 27971417 +3079 chr4 + 190214555 166051242 166051241 166051300 59 TTCTCTTTTTTCTTTTTTCTCCTCCCTCCCTCCCTCCCTTCTTTCTTCCCTCCCTCCTT chr4 + 94230402 65834492 65834491 65834550 65834492 65834491 65834550 59 TTGTTTTTTTGTTTGTTCCCCCCCCCTCCCCCCCCCCCTTCTTTTTTTCCAAATTCCTT ..x.:.....x:..x..:.:..:.......:...:.........:..:..xxx:..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 100216750 89997805 +16991 chr4 + 190214555 166055010 166055009 166055307 298 TCTATCCTCCTATATAA--AATGTTTTATCTATA------------AACATATATTTTCACATATT-TTTTTCTGTTGCAGATTGAAAGACATGACAATTGTGCTTATGACTACCTGGAAGTTAGAGATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAACCTGAAGACATAAGATCTACCTCCAATACTTTGTGGATGAAGTTTGTTTCTGACGGAACTGTGAACAAAGCAGGGTTTGCTGCTAACTTTTTTAAAGGTAA---TTTGAAATAATTTTCAAACGTGAGATTTTCTT chr4 + 94230402 25269154 25269153 25269469 25269154 25269153 25269469 316 TCTATTCTATTATGTGACTGATATTTTATATTTATGGTCAAGTTGAACTAAATCCCTTCAAAAATTATTTTTTTTTTACAGATTGAAAGACATGACAATTGTGCATATGACTACTTGGAAATTCGAGATGGAATGAATGAAAACAGCCCTTTGATTGGTCACTTCTGTGGCTATGACAAGCCAGAAGACATTAGATCTACCTCTAATACTCTGTGGATGAAGTTTGTTTCTGATGGAACAGTTAACAAAGCAGGATTTGCAGCTAACTTTTTTAAAGGTAAATGTTAAAGCTTATTTTCAGACCTGTGAACTTCTT .....:..x:...:.:.--:..:......x.x..------------.x:.x..x::....x.x...-.....:.x..:..........................x.........:.....:..x.........:x.:......:...........x..x.::........:........:..x........x...........:......:......................:.....x..x...........:.....x....................---..x:.:x.x.......:..x..x..x:..... 17M2I15M12I20M1I214M3I32M 245/298 82.2% 316/94230402 0.0% 18/298 6.0% 140785856 49428699 +10166 chr4 + 190214555 166056724 166056723 166057369 646 TTTGACTTCAAATTCAGAAAAACACACA------CTGTGTCTGAGATAAGGTGATCTTCAGTTGGCCCAGCAATAGGTTTCCAGGCCTTCTGTGGGTTTTTTG-ACAATGCTCAGTTAGCAGCAACATGAATTTGTATACGTTATCCATCAGGGGCTTATACGTTGTTCCTGCTCCTTT--------GCTG-ATAGAAGCAATGGAAGAAATGAATTGTTTCCATTTTATTTGGAACCATTAAGCATGGTAGTTTTTTAGAAAGATTTACGCCCTCATATATATATATAAGAATAGCATGGAAAAGAACCCCCAACCATGATTCAGTTACCTCTCACCAGGTCCCTCTCATGACACGTGAGAATTT----TGGGAGATAT----CATTCAAGGTGAGATTTGGGTGGGGACACAGCCAAACCATTTCACATACAT---ACACACATATATATGTATAGTTGTTCTATAACTATGACCATTTTCATAGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCTGAACACTCTGGGCAGTTACCAGTGTGCCTGTGAGCCTGGCTATGAGCTGGGCCCAGACAGAAGGAGCTGTGAAGGTATGACTGCACTCCT----TCCTGGACCCCCACCCCCCA-----CAATTATTTA--TTTCTTATATTCTC chr4 + 94230402 25270792 25270791 25271400 25270792 25270791 25271400 609 TTTGAGTATGAATTCAGGATAATGCACAAATTGATTCTGTGGGAGATAAAGTGCCCTTCAAGTGACCCTGCTGTGGATTTTCAATCTTTCTTTCAATACTTTATACAACCTTTAGATTAATGCTGCCTAAATTATTGTATGTTGCCAACAAAGTGCTTATAAATTAGATCTGCAGCTGTCAGTAGATACTGTAAAAAAGCAAAGCAAAACA-----------------------AACCCACAAATATACACATTCTT-------ATTTTCTCCATTACAGGTCTCCTTA------GTTTTTGAAAG------------TGCTCTAGTCAGCATCCAT--GGTGTGTTTTGTAGCAC-----AACTTATAATGGCATATATACAGCTTTCAGGGTTAATATTG-----------ATCCA-------TCACTTACAGCTGAGAAAGGTAGTTATTTA-ACATGTTTTTCATTCTTCTCTGTCTTGGCAGAGGAAGATGAATGTGCCAAACCTGACAATGGTGGCTGTGAGCAGCGCTGTGTTAACACTTTGGGCAGTTACCAGTGCGCCTGCGATCCTGGCTATGAACTTGGTCCTGACAAAAAGAGCTGTGAAGGTA-AAGTGTGTTGCTATGCTCTCAGGTCTCAAAGCTCCAGGCTTTGATCATTTGCCTTTCTTATGCTCTC .....x.x::.......:.x..::....------:.x...xx.......:...x:.....:x..:...x..x:.:.:...:..:x.:....x.x::.x:...:-....:x:.:..x.x:xx..x:.x.:....xx.:..:...::.x.:x.:.x.......x:..:xx:....xx..x.--------:...-.x.:......x.x..:.x.-----------------------....xx:..::..:xxx:..:..-------....x.x..x.:.:.x:.x.x:x..------.:x.xx:....------------..x.::...:.x.x::..:--...x:x.:.::.::...-----..:..----...x.x....----.x....:...x.:xx...-----------.x...-------....x....x---.x.x.x:..xx...x..-.xx....:.x:.x::x.xx.::.:..x::............:...............x:...x..............x...x.x......:................:.....:..x...........:..x..:..x....:..:..............-:.x..:::.x..----..:::.::.:.x.xx.:...-----::..:....:--........::.... 28M6I69M1I75M8I4M1I19M23D23M7D25M6D11M12D19M2D17M5D5M4I10M4I18M11D5M7D10M3I17M1D160M1D12M4I20M5I10M2I14M 378/571 66.2% 609/94230402 0.0% 113/571 19.8% 140785932 49428623 +3129 chr4 + 190214555 166059188 166059187 166059237 50 AGCATATATGTATATGTGTATACACACACACACACACATACACGTGCACA chr4 + 94230402 68837092 68837091 68837141 68837092 68837091 68837141 50 AACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACA .:.:.:.::..:.:.....:........x.:...:........:...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 97222096 92992459 +3107 chr4 + 190214555 166059194 166059193 166059249 56 TATGTATATGTGTATACACACACACACACACATACACGTGCAC-AAAGACAAAAAAG chr4 + 94230402 43671851 43671850 43671907 43671851 43671850 43671907 57 TGTCTATACATGTATACACATGCACACACACAAACACATGCACTAAAGAAAGCAAAG .:.x....::..........::..........x....:.....-.....x.:x.... 43M1I13M 45/56 80.4% 57/94230402 0.0% 1/56 1.8% 122387343 67827212 +12176 chr4 + 190214555 166060005 166060004 166060196 192 CTTTTTCTTTTCTTTTCTTCTAGCTGCTTGTGGTGGACTTCTTACCAAACTTAACGGCACCATAACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAATAAGAACTGTGTGTGGCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGTGAAGTTTGAGTTTTTTGAATTGGAAGGCAATGAAGTAAGTGA chr4 + 94230402 25274283 25274282 25274472 25274283 25274282 25274472 190 CTCTCCCTTTTCATTT--TCCAGCTGCTTGCGGAGGACTTCTGACAAAGCTAAATGGGACTATAACCACACCAGGGTGGCCCAAAGAATATCCTCCAAACAAAAACTGTGTGTGGCAGGTGGTTGCCCCAACGCAGTACCGAATTTCAATGAAGTTTGAGTTTTTTGAGTTAGAAGGCAATGAAGTGAGTAA ..:.::......x...--..:.........:..x........x..x..:..x..:..x..:........x..x..x........:..:..:.....x..:..:..............:........x.....x......x.......x:...................:..:..............:...:. 16M2D174M 157/190 82.6% 190/94230402 0.0% 2/190 1.1% 140785722 49428833 +3522 chr4 + 190214555 166061184 166061183 166061260 77 TTTTGTGTGTCTATTTTTCTTCTTCCTTTTTTACTGCCTACTTTTCCTCCTTTCCTTTTTTTTTTTTCTTTTTTTTT chr4 + 94230402 14401490 14401489 14401566 14401490 14401489 14401566 77 TTTTGTGAGTTCATCTTTCTTCATCTGTAGCCATAATCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTT .......x..::..:.......x..:x.xx::.:x::.:......::...:::.:.....:.....::......... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 151659694 38554861 +13334 chr4 + 190214555 166065672 166065671 166065877 206 TTTTTTTCTAGGTTTGCAAATATGATTATGTGGAGATCTGGAGTGGTCTTTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGAAGTGCCTGAAGTGATCACATCCCAGTTCAACAATATGAGAATTGAATTCAAATCTGACAATACTGTATCCAAGAAGGGCTTCAAAGCACATTTTTTCTCAGGTATAAGCATTCAC chr4 + 94230402 25277031 25277030 25277236 25277031 25277030 25277236 206 TCTTTTGCCAGGTGTGCAAATACGATTATGTGGAGATTCGCAGTGGCCTTTCTTCTGATTCTAAACTACATGGTAAATTCTGCGGTACGGAAGTGCCTGAAGTTATCACCTCACAGTACAACAACATGCGAATTGAGTTCAGGTCTGACAATACCGTGTCAAAAAAAGGCTTCAAGGCACACTTCTTTTCAGGTACAGAAAATCAC .:....x.:....x........:..............::.x.....:.....:.....x........:.....:........:..::.x..............x.....x..x....x......:...x.......:....::...........:..:..x..:..:........:.....:..:..:.......:.::x.x.... 206M 166/206 80.6% 206/94230402 0.0% 0/206 0.0% 140788641 49425914 +12277 chr4 + 190214555 166071172 166071171 166071524 353 TTTTTCCTACAGATAAGGAAGCTTTCTGCAAAGAGAAAATTTTTATTTTTGAATCTTGCAAGAACTTGATACAGGTTGCAACTTCAGTGCCATCCAGTATGTATCATTCATAGACTGATGACCTCTGATAGTCTCAGAGGTTCG--CTGCAGGCCTCTGATGGAAGAATACCCTCTTCCTTTTTCCTAATGATGGGCCTTTTCTTTATCT---TCCATGAAGGAATGGAAAGCAGACATGTCCATTCCAAAGAAGGGGGCTAATTTCCTTCTG-CAGAA-AATAAATGCTTTTATTTCTCCTCGATAAAACATTTATTTCTAGCACTAAGTAAAACACTTTTTTTCTTCATTTTGTGTCT chr4 + 94230402 25281165 25281164 25281514 25281165 25281164 25281514 350 TTTTTTCCACAGACAAGAAAACTACCTGCAAAGAGAAAATTTTTGTTTTCGAATCTTGCAAGGACTTGATACAGGTC---CCTTCAG----GCCGAGTACGTATTATTCACAGACTGGTGGCCTCTGAAGGTCTCAGAGGTACGACCATTTGTCCTCTGA---ATGATTTCAGTCTAACATTTTGTTGGGAATGGATCTTTCCCTATTCTGAGTACTGAAATGAGAAAAGAAAAAAAGTATCCATTCAGAAGCGGGAAACTCATTTCCATCTGTCAGCATAACAAATGGCTTTGTTTTTACATGGCAAAACATTTGTTCCTATAACTAATACAGACTAATTGTTTTTTTGTTTTTTGTTT .....:.:.....:...:..:..x:...................:....:............:.............:---x......----::.x....:....:.....:......:..:.......x:...........x..--.xx:x.x.......---.x..x.x.xx...xx.x....x:.::x:....::....:.:.xx...---.x.xx:..x..:x::.:.:x.:.x:.:.......x:...x:..:::..x......x....-...x.-..:.....x:...:...:.x.x:.::.........:..:...xx.....xxx.:..xxx..x...:..::....x...:. 77M3D7M4D53M2I14M3D47M3I60M1I5M1I80M 242/343 70.6% 350/94230402 0.0% 17/343 5.0% 140790007 49424548 +19176 chr4 + 190214555 166073981 166073980 166075076 1096 TCAGGAGCAATCTGCCAGTTTTGACGTTAATGGACAGGCC--AGCTATGG-AACGACAGATGAGTGACATAGA---GTGATGGTTGATGCCTC--ACCGAATTGACTGCCTGTTAATCTAGTTTGGCTTTTTTCCCTGTAGTGAATTTGTTGGCTATTTCTTGGGGCTCGTATTTCCTAGTCTAATCTTTACCTTACTTCTAGCACACTAAAAGCCCTTTTAGGGGATGACTTATTAATAAAC----TTGTCTACCAGA--GTAGATTTGTTTAAAATATATAAATTTCATTTCTTCTTTAGAGTAGTTTAATTATGCCTTTTTTCTGCTTGGAGTGCTATGAAATGTCCAAATTCATT-AATGCTAAGCATAACTGCAGAGTTAATGGGGAAAAAAATCAACTA---CAGTAA--TTATACTGAGTGATTTTTTTAAGTGATTACAT---------ACAAATCTTGGAACCTTGTTTAGCCTCT------GTCTGTATACCATGGTTAATATATTGAAGGATATCCCTCTA-CTTAAATGCTATTTCTTGCCGCTATTCAAACTATGCACAATTTTAAATTTATTTTTTTAAATTGGCAATAAATGTTTAGGGTTAATTTGAAAAAAGATCTATTGATTCCCTCTTTCTCCTACCTAAAACTTCTACTCCAGCATAGGAATAAAAGAGGATTAC------------------------AAGTTATTATCGT----------AGCGCTAATAGTCTTGGAA------ACTTGATTCATGGTACAACGCTTCAAGCTAAACAAGGAAAGGGTAAAACTAAGAGATCATACATTTTTGTTTGTTTTATGTTGGGAACAGGAGAAACCATGACTTAGTTTACCCTTTGGCAGTGTTAA--CCACAACTAAATGACTCCCTTT-----GATATCCTCTGTTTTTAAAGTTACTTACTAGACTATGGGATTGATCTCTTTGCTAGACAAAGATGAATGCTCTAAGGATAATGGTGGATGTCAGCACGAATGTGTCAACACGATGGGGAGCTACATGTGTCAATGCCGTAATGGATTTGTGCTACATGACAATAAACATGATTGCAAGGAAGGTATGGAACGGAATACACTTTTTTTGACAACA---TGTAGAATTTCATGTGGTTTGGGTAA---------AGCACTGCTTCCAAG chr4 + 94230402 25282972 25282971 25284057 25282972 25282971 25284057 1086 TCCAGAGCAGTCTCCCTGTCTCAA-----ATGTACTGGCCTCAACTAAAATGACAACAGCTGAATGACATAGAAGGGTGGCAGCTGAGGCCTCTTGCTAGAATGACAGGCTGTTAATCTAGTTTGGCTTTTTTCCATACAATGAATTT-TTAGCTGTTTAATGCAGGTCATATTTCCTCCCCTACTCTCTGCTTTACTTCTAACACACTAAAAGCTCTTTTTAGGGATTATATGTTAATAAACAGAACTGCATGCTATATTGTAGATCTCCTTGAAATAATTAGTGCCAGTTTCTTTTGTATGCT--TTTCAATGAAATGTTTTCCTTTTCGAGATATTCTGTAATGTCCAGATTCATTTAAAGTAAAGCACA-CTGCCACTCTGCTGGAAAGAAAATGCAACTTATTCAGAAAGTTTATGTTAAGTTGTTCTTTTC-----TTACATCTTAAATGTGCAGAGCTTGAAGCCTTGTTTGGCCTCTCTGCCTTTCAGCACACCACTGTTAA---ATTGTGGAATTTGCATAGAGCTGGAATATTCTGTGTTGGT---------------CATAAATTGCACTCCTGTTGTTTA---CCAAAATAAAGCTCTGGGCT----------AAATATTTATGAAATC------TTTACCAGCTAGA----CCACTTGA----AGGAGTAAATGCTGGTAACTGTCTCCTTTGATGCAGCTTGTTTGATTTATTAGTGTTCCCCTTCCCAGTTCTAAGAAAGATGAGACAGAATATTTGATCCATGGTGTAGGG--------TGAGCAATAAGCAGATAGAAGTAAGGTAGCAGAAA----------------GCTGAGAA---GAATGACTATGCTGTAGTTTATCCTCTTCTGATTTCAAAGTCTGTGCTAAACCCTTTTCTTTTTGAGAACAAGTTCT--TCTTCAACCTGCTCAC----CTATTCTTGTTGTGTATTTCTTAGACAAGGATGAGTGTTCGAAGGACAATGGCGGTTGCCAGCATGAGTGCATCAACACAGTAGGAAGCTATGTTTGCCAGTGCCGGAATGGATTTGTGCTACATGAAAACAAGCATGACTGCAAGGAGGGTAAGTTACATGGTA------TTTGGACAGCAGATTATACAATTC-------TTTCAGCAAAATCTTTGCAGCACTCCTTCCAGG ..x:.....:...x..x..:.::.-----...x..x....--.:...x::-:..:....x...:.........---...:::.:...x.....--:.:::.x....x.x..........................x.::.:.......-..:...:...xx..x:.x..:........xx:...x...:.:.:.........:............:.....x:.....x.:x.:.........----:..:x.:.:.x.--......:.x:..:.....xx..:xx::x:......:.x..x:x.--...x.x.:x:x:x....:..x:.:.:::.::.x..x........:.......-..x.:x.....:.-....x:xx:.:x...::.:....xx.....x---...x..--....::.:...x:..:....x-----......---------:..:.x....:.:........:......------x..x.:.:....:x.....---....x:.:..x.x.x.xx.-..x:...::.x.x.x...x:---------------..:..x..xx.x.::xx..x....---:x:x......xx.:.:..x.----------...x..:...x:.x..------.:.x.:.x...:.----.:...:x.----....:....x.xx.:.x..------------------------:.x......x:..----------..:x....x.:xxx..::.------.:.....:......::.:x.--------.:.:...x:.:x:.:..:..x....:x.x..x.x.----------------.:..:...---..:x:..:...x:x.......:...:.xx:::.x.:..--:.xxx:.....:xx:.::....-----:.:.xx:...--.:..x..x:.:..:..----....xxxxx.x:.x.x...x:.......:.....:..:..x.....:.....:..x..:.....:..:..::.......::.:..:.....::.x..:..:.....x....................x..:..:.....:........:....x.xx..:x::..------...x....:..---.:..x....:-------...x:.:..---------......x......:. 24M5D11M2I8M1I22M3I17M2I53M1D94M4I12M2I44M2D52M1I13M1D31M3I6M2I21M5D6M9I28M6I19M3D19M1I20M15D24M3D20M10D16M6D13M4D8M4D19M24I13M10I19M6I20M8D35M16D8M3D38M2I22M5I10M2D16M4D165M6D11M3I10M7D9M9I15M 669/991 67.5% 1086/94230402 0.0% 200/991 20.2% 140791009 49423546 +10912 chr4 + 190214555 166077741 166077740 166078036 296 TATTTTCCAGAGCAGATGAATATAATAACCGACACGGGAGTGAAAAT---TAGCTGGTATTCAGGAAAAT-CTTTCAACAGGGCAGTGGGTAA----ATAGGCTGCTTGCTTT-----CTGCCTCAAACCTGGGCTGGATTGCCACACTGTCTGATATTATGGTTATTGGTGCAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCCAACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGCACTTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGTAAGT chr4 + 94230402 25285217 25285216 25285516 25285217 25285216 25285516 300 TGTTTGTCAAAGAGGAGGAATGTGAT--CCTTCACATGTGGGAAGGTGTTTAGCTG-TGTTCCTAATGATACTTTCAGC---TCAGTGGGTCACCTGACAAACAGTGTACTTTTCTGGCTACCTCTGAAT---ACAGAACTCCCAGACTAATTGATGCTCTCACTATTGGCACAGCTGAGTGTGAACAGAAGATCCACAGTCCCAATGGCATCATTATGAGTCCCAACTGGCCCGACAAGTATCCCAGCAGAAAGGAGTGCACCTGGGAAATCAGTGCCACCCCTGGGCAGAGGGTCAAACTGGTGAGT .:...x:..:..x:..x....:.:..--..xx...:x.x.x...::.---......-.:...xx:.x:..-......:.---x........x.----.:.::.x.:x.:....-----..:....x:.x:---:.x.:.:.x...x...:x:....::.x.x::......::...............................x.:....x....:.:x..............x........:..x.....:..:..:.....:...........:.....:.....x..xx.::.....:.:..:... 26M2D19M3I6M1D13M1I8M3D11M4I16M5I12M3D176M 209/287 72.8% 300/94230402 0.0% 22/287 7.7% 140792524 49422031 +15403 chr4 + 190214555 166091109 166091108 166091456 348 TTTCTTCTTTTTAAAAAAGGCCTTTAGTGAATTTGAGATTGAGCAGCATCAAGAATGTGCTTATGACCACTTAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCTACTGGAAATAAAATGTTTGTTCGGTTTGTTTCTGATGCATCTGTTCAAAGAAAAGGCTTTCAAGCTACACATTCTACAGGTCAGCAAATTCAAGTCATGCTT-------------------CTCTTTTTTGACTGAGATCCAGGTTTTTCTTCTGGTG-----AATTTGGTTCAATA------ATAGGATTGTAAATAAATCTCCAAGCATAGCAGATAAAATT chr4 + 94230402 25289901 25289900 25290278 25289901 25289900 25290278 378 TCTGTTTTTTTTTCCCCAGACTTTCAATGAATTTGAGATAGAACAACATCAAGAATGTGCCTATGACCACTTGGAAGTGTTTGATGGTGAAAGTGAAAAATCACCAATTCTGGGACGCTTATGTGGCAGTAAGATACCAGAGCCTCTCATTGCTACTGGAAACAAAATGTTTCTCCGCTTTATTTCTGATGCATCAGTTCAAAGGAAAGGCTTCCAAGCAACACACTCTACAGGTCAGAATATCAGGATGTGGCTTACTAATAACTTCCCCTTCATTCTTTAGTGGAAGATATTCAAGCATTTCTTTTTATAGGAACAGGATGATTTGAAAGATAACACAGTGTTATAACTAAACCTAATGAAACGGTAGGAAAAATT .:.x..:.....xxxxx..:.:..:.:............x..:..:..............:...........:.....:........x....xx.....:.....:.....x.....x:.:.......::...........x..:..::.x...........:.........x.:..x...:.............x........:........:.....x.....:............x.x..:x:::.xxx....-------------------:.....xx..:xx..x..:..:.:x......:.x:.:-----.:xx..:..::.x.------.:..x:..:...x....:..xxx::x.::.:..:x...... 256M19I37M5I14M6I41M 255/348 73.3% 378/94230402 0.0% 30/348 8.6% 140801208 49413347 +17632 chr4 + 190214555 166099212 166099211 166099534 323 GAAATTTAAATTGGACCCGTTAAAGCTCATTGACCTTACTCATCTTATTTTTCTTTCCTGGGCAGAGTGTGGCGGACGATTGAAAGCAGAATCAAAACCAAGAGATCTGTACTCACATGCTCAGTTTGGTGATAACAACTACCCAGGACAGGTTGACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCCAGACATTTGAAGTGGAGGAAGAAGCAGACTGTGGCTATGACTATGTGGAGCTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTGGTCGATTCTGTGGATCCGGGGTAAATA chr4 + 94230402 25297169 25297168 25297481 25297169 25297168 25297481 313 GAATTTTAATTTTCACTGAATAAACTTAGTCCACTTTTTCCCCCTTAATTTTC----------AGAGTGTGGTGGTCGGTTGAAAGCTGAAACCAAGCCAAAAGATCTGTACTCACATGCTCAGTTTGGTGATAACAACTATCCGGTTCAGGCAGACTGTGACTGGCTCCTGGTGGCAGAGCGTGGCTATCGAGTTGAATTAATGTTCCAGACTTTTGAGGTTGAAGAAGAGGCAGACTGTGGTTATGATTACGTGGAGCTCTTTGATGGTCATGATAAGACAGCTATGAGACTTGGTCGATTTTGTGGTTCTGGGGTAAGTA ...x.....x..xx..:x:x....x:.x:.:x..:..x::.x:....x.....----------.........:..x..:........x...x.x..:....:.......................................:..:.xx....:x........x.....x:.:..:x....:..x....x....x........x:x........x.....:..x..:.....:...........:.....:..:...................x....xx:......:..:.:...........:.....x..:.......:.. 53M10D260M 246/313 78.6% 313/94230402 0.0% 10/313 3.2% 140802043 49412512 +33886 chr4 + 190214555 166100713 166100712 166102679 1967 ACTTGCTTGTTGTTTTTGTT--------------TTCCTTCAGCCACCAGAAGAGATTTATTCAATTGGAGATTCAGTTTTAATTCATTTCCACACTGATGACACAATCAACAAGAAGGGATTTCATATAAGATACAAAAGCATAAGATATCCAGATACCACACATACCAAAAAATAACACCAAAACCTCTGTC----------AGAAC---ACAAAGGAATGTGCATAATGGAGAG-AAGACATATTTTTTTTA--AAACTGAAGATATTGGCACAAATGTTTTATACAAAGAGTTTGAACAAAA--AATCCCTGTAAGACCAGAATTATCTTTGTACTAAAAG------AGAAGTTTCCAGCAAAACC-CTCATCAGCAT------TACAAG-----GATATTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGA-------AATAGATGCCTCACAATTCAGACAGTTTAATTCAGGAACTGTGACCCT-----GCAGTGTTCTTTTTGACAATT------TGT-CAAGATTTAGGGACATAAAATGATCTTGCAGGTCGTAAACTGGAAAACAGTATTTTGGTTGTCTTAGGATAATTGC--TGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAGGTGAATGTGAAA-TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT---GTGTCTGGT-------GTTTGGAAACTGGGATATTTCAGCTTCATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGACCACTTTAGTGTACTTACATTTAGATGAGTTTGAAATCT--CAATGG------------TGTCTAATTATTGCAGTTAAATTCTAGACATCAGTTCTTTAAGTCTCAGAAAACGCCCAGTGAATTGGTAAACTTAGTTCTTTTTTTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGA---AGCCTGTGATGTCTTATGAACC--TTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGAT---GGTTCATTACTCAAGTTACTGCTGCTGCTATTGTCTTTCCTTTGTTGTCGATCTGTTATTGTTGTATTATTATTGTTGATGTTGTCATGGTTAATCTATTTTTTAAAATTGAAATGAAGCAGAAGTAGGCCTTGTGAGAACTGAAAGGTCTCTTTC--ATTTTTCTCTTCCTGGGATTCATTTTTTCAAAACACAATGCTGGAAAAAAAA-----------------GATTTGTTTCTGA------AAGACTTCTTATGGTGCTATTCCATAAACTTT-----------------TTTTCA--AACAAGTTTTTGACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGCATTTGAAGACTAAAGACTTGTC-------AAATATATCAAGAGTATATCATTGCAAGGGCAGCACTTGTCCTGTGGAACAACTACTTATAATGCCTTAGAATTCCTGCACATGATCAAACAGATCCTCCTA-AAACACACCT----TTTGA----------AATG--TTGAACATAATAGTGTATGTTAATTAACAGCTCTATGAAGAAAAT--CCATTTCCATGACTGAAGCAT-TGGATATAAAT--ATGGTGTCCTGCTTTTTTTGTAGAAA-ATGTAA--TTTGAGGATGA---ATTTTCTGC-TTTAAAGGCATGTGTGTTTTTAAAATTAATGAATGTA---GATGTGTG-ATTGTCTGAGTGAGTGAAACTACAAGAG-GTAAAAAATAATGGGTGGTTGAAAAGTTAAAATG------TATGTGCCAAGTTCTACTAGAATTCCATTTGAA-ATAGCACCTTCCTT----AGGTTTCATGGACAAATAATGGGAACTTCTAATTTTGATCAATCCCATTAAAAAAAGGCTCTTTC-CTTTA-GAGAAACTCTATTTTGATGTC----AATATAGATTACTGTATGAAGTAGCTTTGTGTCTGTTACCTGTCCATGAGCATACAACATTGAATACAATTGGGTGTATTCTTTCAGTTTTACACAATTAAA chr4 + 94230402 25298287 25298286 25300339 25298287 25298286 25300339 2053 ATTCACttactgtttttattattattattattattTATTTTAGCCACCAGAAGAAATCTATTCAGCAGGGGAAACTCTTTTACTTCACTTTCACACTGATGATACAATCAACAAGAAAGGATTCCATATACGATACAGAAGTATAAAATATCCAGATAGTGTGCACACCAAAAAATAACACAAGAACCTCTATTCAAGAGAAGGAGAGCAAGACAAAAAAGAGTGCACAGTGGAAAGAAAGTCATGTCTTTTTTATTTAACTGAAGTTATTAGCACAAATGTTTTGTAT---GAGTCCAACCGAAATGATGACTTATAAGACCAGAGACaaaaaaaaaaaaaaaggaagaaagaaagaaagaaaaaaaCTACCTATCACAGTGGAATACACAAGATGGTGACATGCAGACTCTATACTTGACTGTCTCTGCAAAGATGGTGAAAGGACTTTGCGCACTTCCAGG-AGAATATGAAAGCTTTTGTTCGTGGTTTGACATTTGTCATAGATAAGTGAACATTCAGTCAATTATGTTCAGGTGAGGTGACCCTAAAAAACATTCTTCCTTCTGACAGTTGTATGGTGTCCAGGAGAAAAGAAAAAAAAAAGTTCTTTCAGGTCATGCACTCAAAA----TACTGTCCTTATATC----TAGTTGCTTTAACTTTGTATCCTGCAGACAGTTTGTA-TAGAGACTTGAAAGAAG-ATATGAAATTGGAAGGTTTCCCACATTGTTCTGTACTTTTTACCTGTTCGTCTATCGCATCAGGTTATCAGCATTTTAAAACTGGAAAATCTT--------------------------------ACTTCTGAAACATAA-------TGAG--TATTTTGTTTTACTTATGACT-GAGAAGTCTGAGCTGTTACATTGGTCATCATTAGCTTGACCAATCACT--AGTTAA---CTGAATTTGAGCAATGTAAGCATCTGAAAATGTTAGGTTTACTGGTTAAGTAAGCTGTGTCTGAT-GATGTGCTCTTATTTTGCACTGAACGTAGAATATAGACTGAGATG-----AAAACCAATCATCGATCAAATCTGTATCCATGAGATATGGTTTTGTCTGAAACTCCTACTGAATTTCTTTTCAACAGTACACTTGGAGCCACTGCAA--AGCTTTATTTCATTG--GACCTCT----------TTATTAATGAGCTAATTGTCTTGTTTAGCT---------AATCAGAAATGAAGCTACAGCAGTATCC-----AAGTGGGAGGTTTCCTTAAGATTTTTTTTTTTCTGAAAGGAAGAGTGTC----TGTGATGATGAAAAAAAAACAAAACAGTGGACCCTGGATTTGTTTCTTATCAACCGTGAATTCCTATGGTGCTATTCCGTGAACACTAAAAACAACAACAAAAATAACCAACAAGAAGTTTTAGACTTTTGAGCCAACAGCTTGCAAGATCATGAATGTCTCACTACGCCTGGATGAATCCAGAGAAGGAAAGCTTTGCTGCTCTGAGATAGGGCAGG---------TTGCAATGGCAGCACTAGTCCTGTGGAACAACTACTACTATTGCCTTAGAATCCTCGCACACTATCAGACAGATCTTCCTGTGGATACACCTCTAATTTGATAAATAAGTCAATGACTTGGACATTTTAGCATATGCTAATAGAAGGATCTTCAAGAAAAATCCCCATCTGCAGAATGAGATCATCTGCCTGTAAATACACAGTGACTTGCTTTTGATGTAGAGATATGTTACGTTTAGAACTGAGGTATTCTATGTGCTTTAGGCCGTACATGGCTTTAGTCATAATGTATATGCTTTATGTAAGTATTGTATGTATGACTT---CTTCAGGGGAGTGAGAGGTATTGTATGGATGAACA-CTGAATTGTTTCTTTATGTGCCAAGTTCTATCAGGACCCCATTTGACTGTAGCAACTTTTCTTTAAAGGCTTCATAGACAGATAACGGG-ACTTCCAGCTGGCAAGAACCAAGTTAAAAGTATTATGTTTCACTCTACAATAAATACTATTTTGATATCCTTTCTTGTAAGTTGCTACTCAGATTAGCTTAGTTTCTGTTACCTTATTATGAACATACA----TTGGCACTAATAAATCTGATCTTT---TTTTATAAAAATAAA .:.::...::.......:..--------------..x:..:.............:..:......::x..:..xx.xx.....x....:..:...........:..............:.....:......x......:...:....:...........x::::..:...............x.:.......:.:----------...:.---.....::.:x.....:.:....:..-...x...:.:.......--x........x....:.............:..:---....:::.x.:...--.xxx.:.:..........:x:.xxxxx:x.xx.....------....:xxxxx.:x.....:-.::....xx:.------:.....-----..:..x:::....:..:.....:x..x.:x::....x..........:.x.:::::.....x...-...x.x.:x............:::.:....-------x......:xx.x.xx......x..:..xx:......x:xx........-----:..x.x...:..:.....:..------...-..:..xxx.:.:.x.x....x.x....x......:.:x...x:...----..:.x.xx..:.x.:----..:....--.:..........:..x.x.....x.:x.-:...xx.x.:x...:x.-..:.....-...:..x:...:x.x:x..x.:........::.:x...x:..x.---.::..x...-------:...x:.......:.x..:.:--------------------------------..:.........:..-------....--:.:...:x.x......::x:.-..x:...:...:x.x.--..x...------------..x.:...:.:.--......---..::.:x.x..:xx.x....:x..x.....:.::x:..xx.:....x..x.x..:.x.x.:.xx.-..x.....x::x...::...::..:x:.::.---..x...x....-----x:....--.:..x::xx..x..:.x.xxx:..x..xxx..x..:x......xxx.:xx...:..---xx....x:.x.xx.x..:xx..::....x.--:x....x:..::...--..:..x.----------......x..xxxxx:.....x..x...:::---------..x:x..........x:x..:..xx:::-----..x..::....:..:..x--......:.:..:...::.xxx.xxx.x..----::::...x..:........-----------------...........x.------:x..x...:..............:.:...x:.-----------------.xx:..--..x.......x...:...........xxx::xxx...::.:.........x...:.x....xx.x..::::...xx:..::...xx.-------.:...x:x..:.---------......x.........x...................xx..x...........:.::.....:x....:.......:....:-::.:......----.....----------....--...:....xx...::....:....x:.x:.x...x::.::.....--....:.x..x:.:x::.x...-..xx.:.....--.::...x.:.......xx......:.-....x.--...::::x...---...:.x..:-:..x.:.x.:.:::..x:....:xxx.....x..:.:---x....:x.-.....x..x:...x.x---..x..:.:.-..:.:.::..x..x:...x....x.-:.:..x..------................::..:.::........x-:.....x...:::.----...:.....:....:....:...-.....:.::.xxx.xx..:.xx:......:x.xxx.x....-..:..-:.x...:x..........:..----xx.:..::..:..::x:::.x......x..x..........xx::....:......----.x:::..x.x.:::.x.:x.....---.....:.x..x.... 20M14I160M10I5M3I25M1I17M2I32M3D14M2I37M6I19M1I11M6I6M5I65M1D30M7I48M5I21M6I3M1I46M4D15M4D7M2I28M1D17M1D8M1I44M3I9M7I21M32D15M7D4M2D21M1D16M2I6M12I12M2D6M3D65M1D31M3I11M5D6M2I56M3I30M2D15M2D7M10D30M9D28M5D18M2I29M4D19M17I13M6I32M17I6M2I87M7I12M9D81M1I10M4I5M10I4M2I45M2I21M1I11M2I26M1I6M2I11M3I9M1I37M3I8M1I16M3D9M1I25M1D8M6I33M1I14M4I23M1D41M1I5M1I21M4I56M4D24M3D15M 1247/1847 67.5% 2053/94230402 0.0% 326/1847 17.7% 140802426 49412129 +3041 chr4 + 190214555 166116706 166116705 166116752 47 GTTTTTTGTTGTTGTTTTGTGTTTTTTGTAGCTGTTGTTCGTTTGTT chr4 + 94230402 15853503 15853502 15853549 15853503 15853502 15853549 47 GTTTTTTGTTGTTGTTTTTTGTTTTCTGTGGTTGTTTTTTTTTTTTT ..................x......:...:.:....x..:x...x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 150263203 39951352 +3167 chr4 + 190214555 166119207 166119206 166119289 83 CATGGTGGCATGTGCCTTTAATCTCAGCCACTAGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..::.x.x..:.::....:...x.::........x.xx.x...x................x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 90086010 NA +3242 chr4 + 190214555 166156995 166156994 166157073 79 GTGGTGCACACCTGCAGTGCCAGCTACTCGGGAGGCTGAGATGGAAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--..:...x.........:.::........x:xx:x...x.:........::.:..x.xx:..:..:.. 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 90123794 NA +3053 chr4 + 190214555 166180066 166180065 166180147 82 TGAAATCCCATTTTTACCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAAAAAAAGGAAAAGAAGACAA chr4 + 94230402 54037014 54037013 54037095 54037014 54037013 54037095 82 TAAAGTCCATTTTCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGA .:..:...xx...:.:xx::.....:.................x:..:.xx:.:..:x:...:.x.:..::.:.:....::. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 112143052 78071503 +3189 chr4 + 190214555 166180067 166180066 166180136 70 GAAATCCCATTTTTACCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAAAAAAAGGA chr4 + 94230402 57629719 57629718 57629788 57629719 57629718 57629788 70 GAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ..:.x.xx...xx....x.x......:...x:....::..::.:....::.....:...::......... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 108550348 81664207 +5427 chr4 + 190214555 166240968 166240967 166241147 180 AGACTAGCAGCCCTTTAGCTGCAGTTTTTGTGTTAGCCTTACTTC--AAGATGGGTTACACATCAAGTAGTACCCTTTTCTTCAGCCTATCATTTTAATATTTATGAGTTAATTTGAACTCTATATCTA-----ATGCTAGACTG-------TAGAAAACAGGTAAATTTTATCTTAGGCATAACTAATCATTT chr4 + 94230402 25382093 25382092 25382280 25382093 25382092 25382280 188 AAAATGGTAACGCTTTAGCCCTGATTTATCCATTAGACTAATTCCTAAAAATATGCCATGCATCAAATAATACCGTTTCCTTAAGTTTATACTTTCAATATTTATGAGTTCATTTGAATCTCAGATCAAAAAAGAAGTTCAGTTGTGCAGCTTAGCAAACAA------TTTATCTGATGCATAACTAATTACTT .:.x.:.:.:.x.......:x:::...x.x::....x..x.:.:.--..:..:x.::.::......:..:....x...:...x..::...xx...:..............x.......::::.x...x.-----.x.:.x:::..-------...x.....:------.......x.x...........:.:.. 45M2I82M5I11M7I10M6D26M 119/174 68.4% 188/94230402 0.0% 20/174 11.5% 140858875 49355680 +3181 chr4 + 190214555 166253802 166253801 166253910 109 TATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATATATATATATATATATATGCATGC chr4 + 94230402 21109194 21109193 21109298 21109194 21109193 21109298 105 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATA----CTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGC ....:.::::.:.x.x.:.:x:.:...x.....:...x..:.....----.x.::::..x:.:..::.:::..x..::.x.x.:.:.....:.:...:x.......... 46M4D59M 64/105 61.0% 105/94230402 0.0% 4/105 3.8% 145144608 45069947 +3069 chr4 + 190214555 166253813 166253812 166253900 88 ATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATATATATATATATAT chr4 + 94230402 29286192 29286191 29286279 29286192 29286191 29286279 88 ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT .....:......::.x.x::.......x...x.x.x.....xx.x....x.:.:.:...:.:x:::.:x...x....::...x...:. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 136967621 53246934 +3263 chr4 + 190214555 166253818 166253817 166253909 92 TATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATATATATATATATATATATGCATG chr4 + 94230402 54963193 54963192 54963284 54963193 54963192 54963284 92 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACATG .:..:.:x:...:.x..::....x......:.:.......xx...:::.:.x..:.......:x....::x.xx.x.x.x.x..:..:.... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 111290625 78923930 +3133 chr4 + 190214555 166328021 166328020 166328070 50 TGTATGTATGTATGTATATACATATATGTATATATGTATATATATGTGTA chr4 + 94230402 40388217 40388216 40388266 40388217 40388216 40388266 50 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTA ...:.......:.x...x.....:....:....:..:...:.x....... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 125939804 64274751 +3140 chr4 + 190214555 166338294 166338293 166338355 62 TATGTATGTATGTATGTATGTATGTACGTACGTATGTATGTACGTATATAAATATATGAATG chr4 + 94230402 55863979 55863978 55864040 55863979 55863978 55864040 62 TGTGTATGTATGCATGCATGTGTGTACGTAGATCAAAATGTGCACACAGAAATAAGTGAATG .:..........:...:....:........x:.xx:x....:.::.:.x.....x:...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 110474315 79740240 +7538 chr4 + 190214555 166342194 166342193 166342418 225 TGCTCAGGCAGTGAGCGGTTATGAAACATATTTGTCATAGTCTTACTTTTCATTTCATACCTTCTAGTAGCTCTTTCGACCAATTGTCTAAACTATAATGGCTTAATTTTAGAAAGCTTTTATACTAATTTAATGTAATTGAAATGGAAGTGTTTTACATTTTCCAAATGCAAATAAATGGTAAAACTGCTTTATACAAAATGATTTTAACTTTCCTTTAAGAAA chr4 + 94230402 25451779 25451778 25452002 25451779 25451778 25452002 224 TACTGAGGCAGCAGGAAGTAATGAAATGTATTTTTCATACTCTCACTTTTCATTTCAATGTATCAAGCAGGTCTTTAAACTGCTAGTCTAAACTATTATGTCTT-ATTTTAGAAAGCCTTTATAATAATTGTGAATAATTAGAACCCAAAGTGCTTGCTACTTGTAAATGAAAATAAATGCTTAGCCCTCCTTGCAGAAGCCATTTGAAATGTTCTTTTTAAAAA .:..x......:::.x:..x......::.....x.....x...:.............xxx:x..x..:..x.....x:..::x.x...........x...x...-............:......x.....xx:x:.....::..:xx..:xxx:..:.xx:..x:.....x.........x.x.:x.:x.:..::.x..:x::x..xx..:x...:...x.:... 104M1D120M 149/224 66.5% 224/94230402 0.0% 1/224 0.4% 140890415 49324140 +3724 chr4 + 190214555 166346469 166346468 166346558 90 ATATGTGTGTATATATATATACATATATATATGTGTGCATATATATGTATATATATGTATATATATGTATATATATATATATATATGCTT chr4 + 94230402 66286775 66286774 66286864 66286775 66286774 66286864 90 ACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTT .:.:.....x..:...:.:x....x.:x....:..x...:...:....::....x..:.:.:x.:..:..:.:..:.:xx:.:....... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 100059694 90154861 +3064 chr4 + 190214555 166346481 166346480 166346547 67 ATATATATACATATATATATGTGTGCATATATATGTATATATATGTATATATATGTATATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.::.:..:.:....x.::...:.x:......:.x...:..:.......xxx.......:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 120283182 69931373 +3726 chr4 + 190214555 166367419 166367418 166367490 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 90334213 NA +3047 chr4 + 190214555 166376137 166376136 166376195 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x......::.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 90342931 NA +3299 chr4 + 190214555 166385265 166385264 166385346 82 ATAGTGGTGGGTGCCTGTCATCCCAGCTACTCAGGGGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.......x::.--...x:.:.........:::::.......x.xx.x...x.:..............x.xx:..:..:.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 90352067 NA +3326 chr4 + 190214555 166390953 166390952 166391014 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:...............:.:..:.:...:.:.x.:.::.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 164895959 25318596 +3110 chr4 + 190214555 166390954 166390953 166391012 59 CAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACA chr4 + 94230402 78347573 78347572 78347630 78347573 78347572 78347630 58 CAAAACAAACAAGAAAAAAACCAACACAAT-TACATATATATACACACACACACACTCA .....x...x..:.......xx..x.x...-..:.........:............x.. 30M1D28M 48/58 82.8% 58/94230402 0.0% 1/58 1.7% 88043381 NA +3394 chr4 + 190214555 166390954 166390953 166391014 61 CAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACA chr4 + 94230402 78347570 78347569 78347630 78347570 78347569 78347630 61 CAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ...x....x...x..:.......xx..x.:.xx..:......................x.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 88043384 NA +3129 chr4 + 190214555 166390955 166390954 166391018 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATA--TATATATACACACACACACACACACACA chr4 + 94230402 78347565 78347564 78347630 78347565 78347564 78347630 66 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x..x....x...x..:.......:xx.:.:.--..:.....:.:..............x.. 36M2I28M 50/64 78.1% 66/94230402 0.0% 2/64 3.1% 88043390 NA +3045 chr4 + 190214555 166390957 166390956 166391012 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:.....:.:.x.:.::.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 164895957 25318598 +3255 chr4 + 190214555 166390957 166390956 166391016 60 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACA chr4 + 94230402 78347571 78347570 78347630 78347571 78347570 78347630 60 AACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA ..x....x...x..:.......xx..:.:.xx..:.......:..............x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 88043386 NA +3179 chr4 + 190214555 166390990 166390989 166391040 51 ATATATATACACACACACACACACACACACACACATATATATATACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ................x.x....:........:::......:.x..x:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 120250134 69964421 +3168 chr4 + 190214555 166390992 166390991 166391042 51 ATATATACACACACACACACACACACACACACATATATATATACACACACA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .......:........x.x....:........:.:......:.x..x:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 120250136 69964419 +3041 chr4 + 190214555 166391009 166391008 166391074 66 CACACACACACACACATATATATATACACACACACATATATACACACACACATATATATATAAAAT chr4 + 94230402 54963201 54963200 54963266 54963201 54963200 54963266 66 CATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAAT ..:...x.::.....x......:.:.......xx..::.:::.x..:.....:..x....:::... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 111427808 78786747 +3391 chr4 + 190214555 166400150 166400149 166400240 91 ATGGAGAGATAGATACACACACATATACAAATATACACACATAGATACACAAACTTGTATGGGTGTGTGTGCATGTGTA---GCGTATGTAATA chr4 + 94230402 22600182 22600181 22600275 22600182 22600181 22600275 94 ACAGAAATTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATA .::..:.xx:..:x.x..........x..x..::.x......:x.....x...:x.....:xx........:..:..:.---:....x..:... 79M3I12M 63/91 69.2% 94/94230402 0.0% 3/91 3.3% 143799968 46414587 +3108 chr4 + 190214555 166409999 166409998 166410056 58 AAATGAGAAATGAGAATTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTAAACAGAGTCT chr4 + 94230402 8959320 8959319 8959377 8959320 8959319 8959377 58 AAATGAGAAATTAGAGTTTTCCTTTATACTTAATTCCTTCTTTTTCTAAACCAGATCT ...........x...:....:....x.x...xx...:..:.....:.....x:::... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 157450679 32763876 +3018 chr4 + 190214555 166430921 166430920 166430977 57 AAAGGGAAAGAGAGAGAGAGTGAGAGCGTGAGAAAAGAGAGAGAAAGAAGAACCATG chr4 + 94230402 54660031 54660030 54660087 54660031 54660030 54660087 57 AAATGGAAAGAGAGAAAGGGTGAAAGCGAAAAAAGGAAGAGAAAGTGAACGATCATG ...x...........:..:....:....x:.:..:::.....:.:x...x:.:.... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 111770890 78443665 +3036 chr4 + 190214555 166446850 166446849 166446923 74 GAACATATATATATGTGTATATATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGT chr4 + 94230402 41749093 41749092 41749166 41749093 41749092 41749166 74 GATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGT ..x:.....x.:.::::....x:.x...:.xx..:....:....:....:...:..::...:x.....x:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 124697757 65516798 +3216 chr4 + 190214555 166446863 166446862 166446951 89 TGTGTATATATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATAT-ACACATACACACACACACAC chr4 + 94230402 79265520 79265519 79265609 79265520 79265519 79265609 90 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC .....:.:.:.::.........xx...:....:...:.::.:.:...::.:.x.:....x...:.x:.:-....x.x:.:.:.x.::... 69M1I20M 57/89 64.0% 90/94230402 0.0% 1/89 1.1% 87181343 NA +3040 chr4 + 190214555 166446923 166446922 166446972 50 TGTATATATACACATACACACACACACACACACGGGGCATTAGCCAAAAA chr4 + 94230402 74671076 74671075 74671125 74671076 74671075 74671125 50 TGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAA ..........:.:...:...............x::::x.x....:..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 91775847 NA +3250 chr4 + 190214555 166483706 166483705 166483788 83 CATTGTGGCGGATGCCTGTAATTCCAGCTATTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:x....:.x.:.--....:.........:...::........x.xx.x...x::........::.:..x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 90450509 NA +3009 chr4 + 190214555 166501456 166501455 166501496 41 TGTAATCTGGAAAAGACCAAAAAAAAAAAAAAAAAAAGGAA chr4 + 94230402 73594318 73594317 73594358 73594318 73594317 73594358 41 TGTAATATGGAAAAAGCCAAAAATAAAAAAAGAAAAAGGAA ......x.......::.......x.......:......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 92907138 NA +15214 chr4 + 190214555 166512265 166512264 166512814 550 GAGAAGAGGGAAAATCCATTTGCTTTTTTAAAGAAAAACAGTTATCTAAGCCCTG-ATCTGGCTTCTATAGGAGCCTGGAGGAGGAGTTTCAAGCTGCAGCCAGGCAGATACTTGATAGACTTCGCATTATTGGATTGACGATTTTTTCTCC-CCTGTTACACCCGTATTTGTAAACTGTACAGCACAGTGACTGACAATGTGAAAGATGAACAATAAGCAGAGATTAGAGAAAGAGATGAAAAGACACTGTGTTGGAA----GAGGAAAGCGATCAGCTTTTCATTATTCTATCAGAGCTTCTGCTTTGTGAGCGATAGATCACTGTCAATCACCAAGAAAGTAGGATGAGAGGAACACAAAAAATCTCATTTAAATAAAGTGTTCAGAGTGTTAACAGGGATTCACAATCAGCAAGAGGTGAAGACTTTTCCTGTCACAGCTACTAAAATACTTGTCTTTCTGGTTGATGTAAGATTATGCTAGATGATATGTATGTACACCAGTAAACTCTTCTTTGCTTATGAAGTTTATTGTTATTCCAACAAGAGTAAAT chr4 + 94230402 25527842 25527841 25528371 25527842 25527841 25528371 530 GAGAAGGGAAATAATCTATCT-----CTTAGAAGTAAAATGTTACCTAAGCTATGGATCAGGCTCAGACAAGAGCTTGAATGGGG-GATTCAAGATGCTGCTTGGTAGGAATTTGATAGATTTTACATCATTGGCCAAACAATTTATTTTCTGTCAGCCAAAACAGTATTTGTAAACTGTAGTGCCTGTTGACTGATGATGCCAAGGGCAAACAATGAACAGAGAATAAGAGAAGAGATGAAAAGAAGCTCTGCTGGCATAATGAGGAGA---AACAGTCCTTCGTCATCCTATCAGGGATACTGCTCTGTGAGTAATAAATCATTGTCATCTGCCTCACAGCTTGGG-AAAAGCAATGCAATAAAG-TCATTAAAATAAAGCATTCACAGTGCT-ACATGTATTTTTATGTGGTAACAGGTTAG---TTTTTCTGACACTTCTACAGAAATGCCTATCTTTCT--TTTGT---------TGCTGAATGAAGTGTTTCTGCAGATATAAACCTAGACGTGTTCATGATATATGTTAATATCTAAGCAACAATAAAT ......:.::.x....:..:.-----:...:.::x...xx....:......:x..-...x....:xx.:.:....:..:.x.:..-.x......x...x..:x..:..:x.:........:..::...:.....x:x:..:....x..:..:-:.x.::.x.x.x................xx..x::x.......::...:x..:.:::......:.:......x..::::..............x:..x..:...x.----.....:.---.x...:::...:.:..:.......:.x.x.....:......::...:....:.....x:::..xx:x.:x.x..:-:.:..x..::...x...x-.....x........::....x....:.-...x.x...:x:.xx::.:..x....x.:---....:...x...xx....x:....:.:.:.......--..x:.---------....::....x:...x.x.:..xxx:.....::xxx:x..:.:....x:.x.:..:x...::x.:...x.:..... 21M5D29M1I29M1D66M1I106M4I7M3D75M1D18M1D27M1D29M3D36M2D5M9D76M 348/524 66.4% 530/94230402 0.0% 32/524 6.1% 140984423 49230132 +3129 chr4 + 190214555 166528480 166528479 166528522 43 TAGCATACCTTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601297 12601296 12601339 12601297 12601296 12601339 43 TAAAACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..:x.::.::......................:.......... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 153927183 36287372 +3567 chr4 + 190214555 166528484 166528483 166528591 108 ATACCTTCTCTCTCTCTCTCTCACACACACACACACACACACGCACACACATACACTAGATCAGAAAGTAATAAGTGGCATAAAAATAAATAAAGTAGAAAGAATAGA chr4 + 94230402 75248046 75248045 75248142 75248046 75248045 75248142 97 ATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagaga------gagagagaaaaaa-----aaagaaagaaagaaagaaaaaagaaaaga ..x.:.:...............x.x.................:x.x.x.x.x.x.------x...:..x..x..-----.x.:...x...x....x.:......x... 55M6D13M5D29M 74/97 76.3% 97/94230402 0.0% 11/97 11.3% 91280438 NA +3037 chr4 + 190214555 166528486 166528485 166528524 39 ACCTTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..x:................x.......:.......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 153927185 36287370 +3185 chr4 + 190214555 166528487 166528486 166528522 36 CCTTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa .::................................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 91280434 NA +3193 chr4 + 190214555 166528488 166528487 166528524 37 CTTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248052 75248051 75248088 75248052 75248051 75248088 37 CCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:................x.................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 91280436 NA +3129 chr4 + 190214555 166535711 166535710 166535751 41 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGAG chr4 + 94230402 75300456 75300455 75300496 75300456 75300455 75300496 41 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAG ..................:...............:.x.x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 91235255 NA +3257 chr4 + 190214555 166535713 166535712 166535747 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA chr4 + 94230402 75300456 75300455 75300490 75300456 75300455 75300490 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 91235257 NA +3095 chr4 + 190214555 166535714 166535713 166535755 42 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGAGCCAG chr4 + 94230402 66158979 66158978 66159020 66158979 66158978 66159020 42 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAG ...::.......:.................::......x... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 100376735 89837820 +3032 chr4 + 190214555 166537748 166537747 166537799 52 GAGACGCTTTCTTTTTTTTTTTTTTTTTTTTTTATATTTGTCTTTTATTGTA chr4 + 94230402 33646848 33646847 33646899 33646848 33646847 33646899 52 GAGATGCTTTATTTTTTCTTTTTTTTTTTATTTGTATTTGATTGTTTTAGTA ....:.....x......:...........x...:......x:.x..x.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 132890900 57323655 +3891 chr4 + 190214555 166592768 166592767 166592962 195 GTTAATAAAAAGAAAAAGGAAAATGCAGAAATTTTACAAGTAAAAT--TCTAATTACAGAAATTTTTACAAGTAAAATTACATG-TTGGTAACTTTATTTTTTCCTCTTTCTCTCTATTTTTCTTTCTCTCTCCCTCCCCCCTCCTCTTTCTTTTCCTCTCTTTAGTATA-----CTTAGCTTAATACTGGGAAAACTTGAAT chr4 + 94230402 56435926 56435925 56436117 56435926 56435925 56436117 192 GTCCACAACTAGTAAATGAAAATTTTTGCAATATCACATGAAAAATAATTCAAACATTAAAACCTT-------GGAATTATTTGATTGGTGG----GTTTTTTCCCCCCCCCCTTTTTTTTTCTCCCCCCCACCCACCCCCCCCCTTTTTTTTTTTTTTTCCTGGGTGGAATCATTTGAACTTGAGACTATTTAGACTTGTAT ..:x.:..xx..x...x.:...x.x:x.x...x.:...x.x.....--.::..x:.:x:...::..-------::.....:x..-.....::----:........:.:::.:..:.x.......::.:.:.x...x......:...:...:....::.:..:.x:..:x.-----:.x.:...:.x...:xxx.:.....x.. 46M2I18M7D11M1I7M4D74M5I28M 116/184 63.0% 192/94230402 0.0% 19/184 10.3% 110156842 80057713 +3566 chr4 + 190214555 166595331 166595330 166595512 182 AGCAAGAGAAAGAAACAAATAATATGTAAGGGAGTTCCAACACACCTAACAGCAAATTTCTCAGCAGAAATCTTACAGGCCAGAAGACAGTAGGATGATATATTCAAGGTGCTGAATGAACAAAACAAAACAA------------AACAAAACTGACAA--TTAAGAAAATAGCACCCAGCAAAGCTCCCTTCAGA chr4 + 94230402 43829289 43829288 43829456 43829289 43829288 43829456 168 AGAAAATGCAAGGATTAAATGATATGT----------------------TACTAAATGTTTTTACAGATACTTTACAAGACAGAGGGCAGGAAAATGTTAAATACAAGTAGCTGAAACTAAAAAAGAAAACAAGAGCCCATCCCTAAATAAACCAACAATGTTAGGAA------ACTTTGCAAAGTTCTCTGCAGA ..x..:x.x...:.x:....:......----------------------:.x:....x.:.:x:....x.::.....:.x....:.:...x.::...x..x..x....xx......xxx.x....x.......------------..xx....::....--...:...------..::x......:..:..x.... 27M22D84M12I14M2I7M6D22M 107/154 69.5% 168/94230402 0.0% 42/154 27.3% 122766042 67448513 +3391 chr4 + 190214555 166603711 166603710 166603824 114 ATTAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------AAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACAAAAACCAAGCAAA chr4 + 94230402 49206561 49206560 49206686 49206561 49206560 49206686 126 ATGAAAATGTTTGGAAAAAACGAAAATGAGAAGAATTAAATGAAATGTTATAAACTTTAGGAAGAAAAAAAAAAAAAACACACAAAAGCAAACAACCAAACAACGACAACAA-AAGAACAGGGTAAA ..x....x.:xx::......x:....x:.:..:..xx...x:...-------------.::..:............x.x.x.....x:....x..x....x.:.:.......-..:...x::.:... 45M13I54M1D14M 78/113 69.0% 126/94230402 0.0% 14/113 12.4% 117397150 72817405 +3428 chr4 + 190214555 166603714 166603713 166603806 93 AAAAAGCAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAA chr4 + 94230402 24042754 24042753 24042849 24042754 24042753 24042849 96 AAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAGGAAAGCAA ...:..:....:x.:x....:......---.:....x..::.....:.:.x...x.:...xx.:.x.....x.:.x...x.......:::x.:... 27M3I66M 64/93 68.8% 96/94230402 0.0% 3/93 3.2% 142560960 47653595 +3120 chr4 + 190214555 166603742 166603741 166603801 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGC chr4 + 94230402 7664421 7664420 7664480 7664421 7664420 7664480 60 AAGAAGGAAGGAGGAAAAAAAAAAAAAAAAAACTCAGAAAAATCAGAAGAAACAAAGAGC ..:..::..::.::...................xx.:.x....xx:..:.......:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 158939321 31275234 +3064 chr4 + 190214555 166603747 166603746 166603809 63 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAA chr4 + 94230402 63541259 63541258 63541321 63541259 63541258 63541321 63 AAAAATTAAAAAAAACAAAAACAAAAACCCATACAATTACTAAGGAACAAAAAAAAATAATAA .....xx........x.....x......xx.x....x...x..::........:x..:..:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 103062488 87152067 +3109 chr4 + 190214555 166603754 166603753 166603830 77 AAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAA--CAAAAACCAAGCAAAACACAG chr4 + 94230402 10103114 10103113 10103192 10103114 10103113 10103192 79 AAAAAAAAAAAAAAAAAAGACAAAACCAGCCAAGCAAAACCAAGCAACAACAAAAACCCACAGAACTAGAAACAAACAG ..................:......x..:x:.x:x....x...:x.:......x..--..x.:.x.x..x..x.x.... 56M2I21M 57/77 74.0% 79/94230402 0.0% 2/77 2.6% 156500640 33713915 +3202 chr4 + 190214555 166603760 166603759 166603817 58 AAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACAAAAACC chr4 + 94230402 10103114 10103113 10103171 10103114 10103113 10103171 58 AAAAAAAAAAAAAAAAAAGACAAAACCAGCCAAGCAAAACCAAGCAACAACAAAAACC ..............x...:.....xx..:xx..:.....xxx.:.............. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 156500646 33713909 +3049 chr4 + 190214555 166603769 166603768 166603823 55 AAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACAAAAACCAAGCAA chr4 + 94230402 23780791 23780790 23780845 23780791 23780790 23780845 55 AAAAATAGAAGATAGTTCAAACAAATAAACAACAACAACAACAAAAACCAAATAA .....:.:..:xx.:.x....x...:...x.:...................::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 142822978 47391577 +3173 chr4 + 190214555 166640259 166640258 166640368 110 ACATAAATATATATAAATTGAACATATATGTATGTTCAAGAGAAGCATGTGTGCGTGTATACATATATATATATATATATGTATACACGCACACACATA--TAGAATCGAAA chr4 + 94230402 28865727 28865726 28865836 28865727 28865726 28865836 110 ACCTGAATGTACTTTTACTGCACTTAGATGCAA--TTAAGCCTACAGCGCGTGTGTATGCACATATATATGTATCTATATGCAGACAAGCACATACATGGCTATAATTAAAA ..x.:...:..:x.xx.:..x..x..x...:.x--.:...xxx.xx::.:...:..:.::..........:...x......:.x...x.....:....:--..x...::... 33M2D64M2I11M 72/108 66.7% 110/94230402 0.0% 4/108 3.7% 137774532 52440023 +3001 chr4 + 190214555 166640304 166640303 166640353 50 CATGTGTGCGTGTATACATATATATATATATATATGTATACACGCACACA chr4 + 94230402 27759112 27759111 27759161 27759112 27759111 27759161 50 CATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACA ...:...::x.::.x...:....:.:.....::................. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 138881192 51333363 +3096 chr4 + 190214555 166640956 166640955 166641013 58 TATATACATATATATGTTACATGCACA----CATCATATACACACACACACACACACACTCA chr4 + 94230402 73857048 73857047 73857109 73857048 73857047 73857109 62 TATGTGAATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCA ...:.:x......:...x.:..::.:.----...:..........::.........:..... 27M4I31M 45/58 77.6% 62/94230402 0.0% 4/58 6.9% 92783908 NA +3310 chr4 + 190214555 166663088 166663087 166663154 67 AAAAAAAAAAAAAAAAAGAAAAATTAACCAAAATTAAGAACTCCATGAATGATGTTATAAGATACAT chr4 + 94230402 26602091 26602090 26602157 26602091 26602090 26602157 67 AAGAAAGAGGAAAAAAAAAAAAACCAACCAAAATTAAGAAGTGGTTGAGCCATCTGATAGGACACAT ..:...:.::.......:.....::...............x.xxx...::x..x.x...:..:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 140060997 50153558 +3264 chr4 + 190214555 166664764 166664763 166664839 76 TACACACGAATATATATATGAATATATACACGAATATATATATGAATATATACACGAATATATATGAATATATACA chr4 + 94230402 20811747 20811746 20811820 20811747 20811746 20811820 74 TACACAGAAAAACATAGCTAAATCTTTAT--TAATATACACAGAAATATATACACTAATATATATGTATATGTACA ......x:..x.:...xx.:...x.x..:--x......:.:.x:...........x..........x....:.... 29M2D45M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 145853017 44361538 +3278 chr4 + 190214555 166665812 166665811 166665864 53 TATGAATATATATGAATGTATATGGATATATATATGGATATATATATGAATAT chr4 + 94230402 55824551 55824550 55824603 55824551 55824550 55824603 53 TGTGATTATATATGAATATATATACACATATACGTGGTTATTTATATGAATAT .:...x...........:.....:x.:.....::...x...x........... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 110841261 79373294 +3070 chr4 + 190214555 166665840 166665839 166665886 47 TATATATGGATATATATATGAATATATATGGATATATATATGAATAT chr4 + 94230402 55824557 55824556 55824603 55824557 55824556 55824603 47 TATATATGAATATATATACACATATACGTGGTTATTTATATGAATAT ........:.........::x.....::...x...x........... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 110841283 79373272 +26955 chr4 + 190214555 166673801 166673800 166674298 498 TGTTTTAATTTTGTGATAATAAACTCTAAAGAATGCCTTCTTCCTCTAGTACACATATGGTAGATTGTATCTCAAATG-----CTTTTCTGTCTAAATATCCAGAATAAATACTAAATAATGTCACCATTATTATGCAAAATCA-GCATGATGTGAAGATTCAGGTACATGAAA-TACAGCAACATGGTACTTAGAAAAGCTTTTTACTGAGCCAACTTTCATTCCCACAACATGAAAACAAAATCAATTCTGCTTA-AGATAACATAAGTGATGCTACAATTGAGGCAATCTTTACAATACAGCTTGTGTAGTGACAAGAGGAAATGCCAGCCATTTTTATTTTGTTGGAAAATGGCTCAAAGGCAAAGAGATTCTAGCCCCTGGAGACTCGCAATAACCTATAATGAGGGCAACAGCCATCATACAAGAAATGTAACAGATGGCAGCATGGTCACCTCA--CTCAGACACAGGTTACAAAAAAGATGAATATAGGATTTTAATATT chr4 + 94230402 25565663 25565662 25566162 25565663 25565662 25566162 500 TGTTTTTGTTTTGTAACATTCAACTCTAAGGAATGCCTTCCTTTTGTTGTACACAGATGGCAGATGGGTTCTCAGAAGAATTTTTTTTCTCACTAAATATCTGAAATAAATAGTAAATAGTGTCATTACCATTATGCAAAGTCGTGCATGGC------ATTCAGGTACTTGAAAGTACAAGACCATAGCACTT-TAAAAGCCTTTTACAGAGCTCACTTTCATCTATATAACATGAAAACAAAATCAATTCTGCTTAGAAATAACATAAGTGATCTAGTAATTGAAGCAATCTTTACAATACAGCTTGTGCAGTGACAGGAGAAAATGCAAGATATTTTTTATTTTCTAGAAAATAGCTCAAAGGCAAAGCGAGTATAGCCCATTGAGACCTGCAATAACCTACAGTGAGGGCAACAGCCATCACACAGAAAATATAACAGATGGCAGCATGGTTGCCTTACTCTCATATACAGGTTACTGAACAGATGCCTTTAGGG-CTTAATATT ......x:......:.:.x.x........:..........:.::.x.x.......x....:....x.xx.....:.x.-----:......xx.........:::........x......:.....::.::..........:..:-.....::------..........x.....-....:x.x...:.:....-x......:......x....:x........::x:.:............................-.:..............x:x::......:........................:.......:...:......x..x:......xx...x:.:......:..............x..x.x......x.x.....::...........:.:..................:...::....:...................::...:.--....x.:.........x:..x.....xx.x....:-:........ 78M5I61M1I7M6D16M1I18M1D63M1I203M2I35M1D9M 394/490 80.4% 500/94230402 0.0% 18/490 3.7% 141108138 49106417 +3072 chr4 + 190214555 166685124 166685123 166685211 88 TAATTTCCTAAATCTTAAAAAATAAAAATAAGAAAATAAAAAAGTAAGAAAACAAATCACAAACAAATGAAAACAAAACCCAGCATCA chr4 + 94230402 34225111 34225110 34225198 34225111 34225110 34225198 88 TAATTTTTCATGATTTAAAAAAAAAAATTGAGAAAATAAACTAGTTAAGACATAGTTGCTAAACTGAAAAAAAGAAGCCCCAACATCA ......:::.x:x:........x....x.:..........xx...x.::.x.:.:x.xx:....x:.x:....x..:x....:..... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 132460013 57754542 +3590 chr4 + 190214555 166703568 166703567 166703709 142 AAAACAAAATAATATATATATACATGTATATATATATATATATGTATATATATATATATATGTGTGTGTATATATATATATATATATATATATATATATATGCACCTGACA---CTGGG--------CAATTTATAAGAAAAAAGGTTTAATT chr4 + 94230402 43288455 43288454 43288603 43288455 43288454 43288603 149 AAGATAAAGTAGAATACGTATGTATTCAAA---ATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATTTAAAGACTAACATGCTTA-AAGCCTAACAGTTCTGGGGAGATACCCATTTCAGAAAAAAACAAGTGAGATT ..:.:...:..:x...::...::..x:.x.---.......:.......x..::......:...x....:.......x.x..x..x.x.:xx.:..::x..-:x:...:...---.....--------..x..:.x..:....x.:..xx:... 30M3D67M1D10M3I5M8I26M 94/138 68.1% 149/94230402 0.0% 15/138 10.9% 123415113 66799442 +3316 chr4 + 190214555 166708347 166708346 166708403 57 TTGGGGTGTGTGTGTGTGTATATA----TATGTGTGTGTGTATATATGTGTGTGTATATAT chr4 + 94230402 13734904 13734903 13734964 13734904 13734903 13734964 61 TTGGGGTGGGCGTGTGTGTCTGTACTGCTGGGTGTGTGTGCATATCTGTTTGTGTATATAT ........x.:........x.:..----.:x.........:....x...x........... 24M4I33M 48/57 84.2% 61/94230402 0.0% 4/57 7.0% 152973443 37241112 +3317 chr4 + 190214555 166708348 166708347 166708423 76 TGGGGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATGTGTGTGTATATATACACACATATATATATTTAC chr4 + 94230402 44815593 44815592 44815663 44815593 44815592 44815663 71 TGAGGACTATGTGTGTGCATACATATGGATGTGTGTATATC----TGTCTACACATACACACA-ATATAAATTAAC ..:..xx.:........:...:.....x:...........x----...x..:.:.........-.....x...x.. 41M4D18M1D12M 57/71 80.3% 71/94230402 0.0% 5/71 7.0% 121892755 68321800 +54223 chr4 + 190214555 166733382 166733381 166735108 1727 AATTTGGTTACAAGATTCTTTATTTTGTAAACTATACATAAACAGTAAAAAAGAAAATGCATTATACTTT-----ATTACGTAAAGTCAACATTAAATTTTGTATTGAGTGTGTATAAATTAAATGGAAATAATTAATCAATTTTGCTTTCAATGAATTGTATACTGGGAAACCAGTTTACCCACTGTTGAAATTAAAGATACCAATACGTAACATTCAACAGGTTTTTCCATTTTTATTATGGGCACAAAACCATTGGTATGATATAGTTAAAAGTGATGGTGTGCCAAAATGTCTACACAATTAATTAACATGCTAACTTAAATACAGCGGTTAAAGTAATTTTTGCTACAGTTAAATCTTAAATGCTACTCTACACAATAATCATAAACAAGTCCACATGGCAATTATGTAACAATAGAAAAAAAGAAACAAACGTATCCCATTTTCTTCATTCCAGCAGCAATACCTTTACTGATATTAATCTGTTAATTAGGTGTGCTTATATATTGCGTAATATACTATATTGGTATGCATGCTAAAATCTTTCTATCTCTATTTTTGCAAGGCACC-ATACAATAAGTTCTCTAAGTTTCCACACTACTAACA-AAAATAACATAATTCTAAGATTAA-ATGC-AAACTTTTACCTAAAAT-GGGAAATAAAATG-AAAATTAAGAA---TTTAAAATTTGACCTTGGGGCAAATGACAA-ACTTTG-------------TAAA---AATATGG-TTTAAATGAATCTTTCCCTTTGTCTTCCTAATTTAAATTCTGCTCCCTAAGTTGCTGGTCAGAAAGATA---AAGAAATCTAGAAAGGCAAACAAATCATGTTATTAAAGAATCTTTTAAAAAATCTGCATGAGACTGCCATCCAAA----TTAAAATACACATTGGGGAGAACAACTAAATTTTTAACTTTCAGAATCCATGGTTTTCCATACTTGCCATTTTGTAAAATGTCCTATTAGATCCAGAATAATTTCATAGGTAAAAACACCACTATTAATGTAAACACAATTGAGGACTCTACAATTGTCACTTTGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCTACTTTGGAAATGCAATTAAAGCATGCATATTTTTCCTAAATCCTTAAGACCCAGGTCATTAAAAA------------TTTATTTATTTTAAATTTCACTTAGAATTATCTTTCAGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGAAAAACTTATTA---------------------TAGTAGCACTTCAAAACTTTATTTTGTCTGACTAGACTGCATATGTATTTTCTTTTTGTGTAAGGAATATAAAAACTC-AAAGCA--------AATGATTCTTATTTAAACATAAAGTTCTATAACTTTAGCTGCAATTTTTCAAATAATTATACAAAATATATGTGAGGTTTAGAATCATTTTGTTATTGGGGAAGAAGATAATTTTAAATAGGCTATCATTTTTGTAAATATTAGAAATGTAGAATTTATTGATTTCAACTGTCATCAATCAAATGTATACATCATGGTCATCACCACCAT---CATCATCATCCCCTTCATCTTCATCATCATCTTCAATTTCATCTTCATCATTCATAATATCGTCTTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCTTAAAACAAGTGAAAGT chr4 + 94230402 25586295 25586294 25588031 25586295 25586294 25588031 1737 AAGTTGGTTACAAGAGTCTTTATTTTGCAAACTATACAGAAACAGTAAAAAAGAAAATGCAATATACTTTTCAATATCACATAGGATAAACATTAAATTTTGTATTTAATGTGTAAAAATTAA-TTCAAATAATAAACTGATTTTCCTTTTAATTACTGAT-----GGGAAACCAGTA-ATCCAGTTTTGAAATCATACAACCTGTAGTATTACATTATACAGGTCAAGTCAACTTTATTGTGGGCAGAAAGCAATAGATGTGATATG----AAGATGGTGGAGTCCCAAAATGTCTACACAATTAATTAACATGCTAACATAAATACAGTGATTAAAGAAATTTTCTCTACAATCAAATCTTAAGTGCTACTCTACACAATAATTATGATCTAATCCACATGGTAGTTACATAACAATAGGAAAAAATAA----------TCCATTTTCTTCATTCCAGCAGCAGTACCTATACTGGCATTAATTTGGTAATTGGGTGTGCTTAGCTATTGCCTAACAACCTATACTGGTATGCATGCTAAAATCTCTCTATCTCTA-TTTTGCAAGGCACCTTTACAATACTTTCGCTAAGTTTCTGCACTAGTAACAGAAAGCAACATGAAT-TAAGATAAAGATGCAAAACTATTTCCTGAATTAAGAAAATAAAAAGTGTAATTATGTACTTTTTAAAAACT-ATGTTGGGGCAGTTGTCAATACTCTGAAATACAGTCATATAAAGGTAATATAATTTTAAGCAAATTTTTCCCCACG----------TTAAATATTTTATGGTAA---TCCGATTAGAGAGAAATACAGGAAAACAACAAAGGGTGAAGTAACGTTTGAGTAAAGAAGC----ATAAAGCCGAGACAACTTAGACATGAAAAAAATTTAAAAAAAAAA---GGTAGGTCAAGAAAATGTTTCATTTACAGAATTAGTGCTCGTCCATGA--GACTGCTTTTGAAAACTCCTTTCAAGAACCTAGCCATGTCCTATTAAAAAACGTAACTCCAAATGCAAACACAAATGAGAACTTCG----------TTCACTTTTCCCTCCTGTTAATTTTTCTCCTTACCTTTGGTTAATTGAAGGCTGGTAAGATGCTACATGTGCATCAAAGTTTTTTCCTGCACCATGTTTTTATTGTATTAAG---TGGGCAACTTGCAAAGCCTGCTGTGCCTGATAGAACTAAAGTTGCAGT---AAGTGTCCTGAAGAG----GACATGCACAGTTCCAGGTAAGGGCAAATAACTT-TTCACAGAAGTTTTGAAAAGACTGGTTTTATACTGTATTTTCTACATTTATATCATTTATATGTTCAGTAGCACAT-AACATTTTCTTCT-TCAGGCTACACTTTCAATGTGTTTTCTTCAGCGCAAAGGCATTTAAAAACTCAAAAGCACATAATATAATTATTCTTATTTAAACAAAAAAGTCTATGACTCCAGCTGCAATGTTTGAAATAATCATACAAAATATACACATTTGTTAGAATCCTTTTGATCTTGAAGAGCAAAGGGATTTT--ATGAAATGTCA-TATTGTGAATTTTAGAAAGGTACAATTCATTGA-CCCTCCTAACATC-ATCAAATGTATCCGtcatgatcatcgtcaccatctacatcatcatctccttcatcttcatcatcatcatcaatttcatcttcatcattcattatttcatcatcatcatcttcatcatcTGTCCAGTCATGGAAATCACCAGAAGCAAAATCACCTGACGTCTCTAAATCAATAGCTAAAAAGGCATGATAGT ..x............x...........:..........x......................x........-----..:..:..:::.x..................x.:......x.......-.xx.......x..:::.....x....:...x.x.x:.-----...........x-.:...x.x.......:.x.x.xx.::xx:::.x.....xx......:xxx:..x:......:......x...:.x..x.:.:......:----..::..:...x..x..................................x.........:.:......x......:x.....:.:.........:...................:..:.x.x.:.........:.:...::.........:......x..----------:.......................:.....x.....::......:..x.....:..........xx......x...:.xx.....:....................:..........-..............-x.......xx...x.........::.....x.....-...::.....:.x.-......x..-....-.....x..x...:..x.-:.:........x.-:x.....x.x.---.......x:.-.:x........:x..x...-...:..-------------....---.....::-.....:::...:......:x:.----------......x:.x:x:xx...---x.:.:.:...:...x.---.:....x.x.x.....xx:.x:x.x.:.x.x.x.......x.----.x...::.x:x.::.xx:x.x...xx...----......x.x.x.---..x..:x...xx....x...x.:..x......:x:..x.:x.....:x--.x.xx:..x.:...xx....x.:.::xx.xx.::x..x..x..xxx......::x...x:x....:........x....:...:::----------..:::.....::x..xxx.::.x.:....:x.xx:::..::.x.x:x.:.x..:.:..........x.xx.x.x::x.:..xxxx.x....:xx.x..::..xxx:x.....---::..:x.:.x:x..------------:.x..xx.x:.x..:..x..x.---..x.:..:.xx...:----:.....:..::.:...:.:.xx:..x:x:.x:..-:.:.::....x...:x....x:..x.:.::.:xx:x.:..x:..---------------------:........x.-..x.:...x..:.-..x.:...x...x:xx....:.......:xxxxxx....x..x.........-......--------...x...............x...:x.....:...::.........x...x.......:............::::xxxx........x.....x.x...::..:x..::x:.....--..:::x.:...-.x....:...x.......x...x....:.....-::.xx..:x....-...........x.:.....:.....::......---..........:....................x.......................x..x..:..x........:........x.....x.....:.....:...xx.........x..x..x:....x.....x......x....x:x:...x... 70M5I48M1D37M5D12M1D89M4D159M10D117M1D14M1I36M1I14M1D9M1I4M1I17M1I13M1I11M3I10M1D19M1I6M13I4M3I7M1I22M10D18M3D16M3I42M4D29M4I12M3D48M2D86M10D112M3D14M12I22M3D15M4D34M1D44M21I11M1D13M1D52M1I6M8I115M2D11M1D33M1D13M1D33M3I156M 1196/1653 72.4% 1737/94230402 0.0% 158/1653 9.6% 141147087 49067468 +10144 chr4 + 190214555 166737462 166737461 166737642 181 CTTACCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACACCAGCACTGTCCAACACTGCCATGACATTGTGTTGGCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTGTTGAAACAACACACAGGCATACAAACACACACATG chr4 + 94230402 25589002 25589001 25589175 25589002 25589001 25589175 174 CTTACCACATTCTGCCACACCATTTGTCCTGGATCCTGTTACTTCATTGCCATATCTGTCAACACACCAACACTGCCCTACACTTCCATGGCACTGACTTGGTTTGTAATATCCATCTTCATCACATAAGGGTATATACTGCCCTGG------AATATATAAATAT-CAAATATGGACATG .........x.....x.........:.:........::.x........x....................:.....:..x.....x.....:..:..xx....:.....:..x..............:.:...x........:....x------..:.:.:.:::..-....:.::x..... 147M6D13M1D14M 140/174 80.5% 174/94230402 0.0% 7/174 4.0% 141148460 49066095 +22386 chr4 + 190214555 166741738 166741737 166742081 344 TTTAGCATTGCTTAAATCTTTCTTTTTACTTAATAACTTTCAAAATGAACATTATATTAGGGTAATAAAACAGACATAATATCTTTCAATAGGTAAGGTAATAAAAGTAAGTTTAATGGCTTTCAAAAAGTTCATAAATTTTGTTGCTGAAATTTAGTGCAGTCTATCTTTGTTGGATTAATATTGATTTTATGTTGCTGTTTCCCTGGGGTTATTTATGTAAGCAATAAAGCCTTCAGAAGAATGATCTATTACTCACCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCTGAGCTCAGTCTGGCAAGGTGGGTCTGCAATGACATTAAAAATGTT chr4 + 94230402 25591514 25591513 25591853 25591514 25591513 25591853 340 TTTAGGAGTGCCT----TTCACTCTCCCCTCTATAACCATAAAAACATACTTTCTATTAGGTTAATAGAACAGACATTATATCTTTCAGTAGGTATGGTAATAAAACTAAGTTTAATAGCTTTCAAAAACTTCATAAATTTCGTTACTAGAATTTACTGTTCTCTATCTTTGTTGGATTAATATTGATTTTATGTTGCTGTTTCACTAGGATTATTTATGTAAGCAATAAAACTTTCAAAAGAATGATCTATGGCTCACCTAGGAGCTTCTTTCCTCCTTGCTGCTTCTGAATGTTGCTGAGTTCTGTCTGGCAAGGTGGGTCTAAAAGGACATGAAAAATGTT .....x.x...:.----:.:x..:.::x..:x.....:x.x....::x..x..x.......x.....:.........x..........:......x..........x..........:...........x...........:...:..::......x..:xx..........................................x..:..:....................:.:....:.............x:...................x.:......:..........:........:..x..................:x..x.....x......... 13M4D327M 286/340 84.1% 340/94230402 0.0% 4/340 1.2% 141150224 49064331 +3036 chr4 + 190214555 166752555 166752554 166752594 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 162343473 27871082 +23533 chr4 + 190214555 166754028 166754027 166754773 746 AAGACTAAATCATTTTAAAATCACATGAGTAAAAATAACTTTATGGTGAATGCTCTGGTTCATTCAACTCATTTAATAAGATCACAAAATAGAACATTAAAACTCCACCGTATAGTGATAAAAAATCCATTTATTTTACATTGTGGGCAAAGCAGATAG----CAAATTAATTTTAATGATTACTTTCAGTATCTAAGTTCTTAATATTTCTGTGTGCTTCTTGG----TGGCTCATAATGGAAACTATAATGTAGTGGCATTAATACAAAATATTAATTACTATTTTTCATCTTATTTAGCATGTGTTGTATCTCTGGCAGAGTTATTTGTTCAACATGCTTCTTATTTGCTCTTT----------TATTCAACACTTGAATTACAAAAACATACACAAA--------ATG------AATGAGCAT--AGTGTACTGT------TTTATTTTCTTAAAAAATAAGTAAAATTTGACATGCAGGTCAACTATTTGCGTCTGTAAG--GGTCTCATCTTTTACCTTGCTGTCTCTGGAAGCAGTAGCACCACTCATTATTAGATATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTCATTCTTATCAAGGTAAATGCTTCTGAGCTCTGACTGGTCCAATAGCAGGTCATAGTTTGTATCAAGTCTGTTAAACATCCAGCCAAGTGAGTCCTTGCAAATTGGCAAGATGCTGGTATCGAATCCTAAAGGCAAAAA--AAAGAAAATGATTAGTTA---AATATGAAAGACA chr4 + 94230402 25596882 25596881 25597638 25596882 25596881 25597638 757 AAAATCAACTGGTTTGGGGTTCAAATGACTGAAAAAAACTTTATCCATAATG------TTAATTCAGTTATTGTAATAGGCTTACAAAATAAAACATTAAGATGCCCTAGTTTAGCAATAAAA----TGTTTATTTTATAACACAGGCAAAGTAGATAGGGAAAGAACTAAAGTAAGTAATTTTCTTCTTTATTTTGGTTTCC--TTCCCCTGTGTAAATACTGGAAGTCGGCACATAA----AACAATATTGCTGTA----------AAAGCTTTTGCCACTCGTCTGTACTTTATCC--------TTGAAATTCCATCAAACTTTTCCATTTAGCTTTTTCCCCCCCCCCCCTTCCTTTTTAAGGTATTCACAA--TAGATCAAGAATCTGTACACAGATTCACAGTATGGCATTTAAAGAGCTTGCAGTTCACTATAATGATCTTCCTATGTTAAAGAAAAGATGCAGTACTACAGTAAGATCAGTCATACAAATATGCAGGCTGTTTTCATCTTTTACCTTGCTGTCTTTGAAAGCAGTAGCACCACTCATTGTTAGATATCAAACTATCCTTGTATGTGTCACAAGAATTGAAGAACGCCCTTGTGCATGGCTCATTCTTGTCAAGGTAAATGCTTCCAAGTTCTGACTGGTCCAACAACAGGTCGTAGTTCGTATCAAGCCTGTTGAACATCCAGCCAAGGGAGTCTTTGCAAATTGGCAAAATGCTGGTATCAAATCCTAGGAGCCAAAAATAAAGATAAAAATAAATCAGATAACAGGAAAGATA ..:.::..x.x:...x:::x...x....x.:....x........xxxx....------..x.....::.xx.x.....:.x.:........:........:.:x..x:x..x...::......----::.........:.x::::.......:......----x:..:...xx.x.:.:...x::...xx...:.x:...:::--.x:::......:xx.x:...----:...x.....----...x...x..:x..:----------...::x..x:::...xx.:.x:.::....::--------...x.x:..::x..:.x..x.:::..:.:.x.x:.:.::x:::x.:...:----------......xx.--.::..:.x:..xx::......:.--------...------..x....x.--...x:...:.------:..x:.x.x.....:..x.::.:x.:.x:x...xxx..:...:::..x::x:.x..:.:.--.x.:.....................:..:....................:........:.....:.............................:...:.x..:..:x.:........:................::..:..............:.:......:.....:........:.....:..............x.....:..............:...........:.......:::..x....--.....x..x:..x.:.:.---..:.x......:. 52M6D65M4D32M4I40M2D20M4I10M4D15M10D31M8D50M10I9M2D23M8I3M6I9M2I10M6I60M2I250M2I18M3I13M 497/710 70.0% 757/94230402 0.0% 83/710 11.7% 141157146 49057409 +3021 chr4 + 190214555 166763315 166763314 166763373 59 AAATTAAGCTAAAAGAAAGACCTTCTAAAAACAATGTAAAGCTGAAAGATTTCAAGAGT chr4 + 94230402 58141871 58141870 58141929 58141871 58141870 58141929 59 AAACTTAGTTACAAGAAGGACATTCTAAAAATAATGTCAAGATGATAGACTTTCAAAAT ...:.x..:..x.....:...x.........:.....x...x...x...:..:x.:.:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 108621444 81593111 +8152 chr4 + 190214555 166792164 166792163 166792307 144 TCTTACTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTTTTGACTTCCACTTTCATGAAGGGCCTTGAACCAGTCCCGCAATCTGTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTAAAAACAGAGAAACAA chr4 + 94230402 25604354 25604353 25604497 25604354 25604353 25604497 144 TCTTACTGGTTCTTTCAGGCCTTTGAACAATCCTAGTCTTCTTATTCTGAATTCCGCTCTCATGAAGTGCCTTAAACCAGTCTCTCAATCTGTTTGCAATCTCCCTAAATTCCAGGTCACTGCAAACTGAAAAACAAAATGCAA ........x....:........:x.x.xx:.::.x........:..:...x....:..:........x.....:........:.x............x.::.....:..:..............x:..:....xx:.:.x:... 144M 110/144 76.4% 144/94230402 0.0% 0/144 0.0% 141187810 49026745 +3988 chr4 + 190214555 166793440 166793439 166793568 129 GAGCTGAA-AAAAACAAAATGCAAA---AACATCTCATAATGTTTT----AAGAAAGTTTACAAATTTGTGTTGGGTCGCATTCAAAGCTGTCCTGGGCCACATGTGGCCTGTGGGCCATGAGTTGGACAAGCTTGC chr4 + 94230402 45575612 45575611 45575746 45575612 45575611 45575746 135 gagatgaacaaaaacataaaaccagtaggatatgtgaccttgtttttgtgaaaataacacaccaatttaggttG--CCAAATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGC ...x....-.......x..x:.x.:---:.:..x.x.:xx......----..:.x.::x:..x.....:x....--:.:x...xx.......x.......x.......:......::....:......:.x..:... 8M1I16M3I18M4I24M2D61M 91/127 71.7% 135/94230402 0.0% 10/127 7.9% 121217828 68996727 +20834 chr4 + 190214555 166805469 166805468 166805960 492 AGGTAAAGTCATGCAGATCCATTCAGATTATTATTTTATCTGATAGACTGGCAGATTAATCTTTAATGGCAAAAGACAGACAGTAGAGGTTGCAGAAGGTTAGACAGTAATCAAAAAATGCATATTTAATCAGATGAATTCCATTCAGGAACCTGCCAAGAACTGCTTTTACTTCTGCATAATATTGATAGAAGGCATGCCTGCTATTACAATCAATTCTAGTAGCCATTAAGAAAATTACTGTGGGGTAAAAAATGAAGTCATAAGCTCAAAGGTTGGTACACTTGGCAATCATCTGACATAATAAAAACTGACTGGCTTTGCAAGAGCAAAATATGTAAGTCTGAAACAAGCAGACAAATTTTCAAGTTCATAAAATACCATAAGTACACGTGTCAGAAAATTGTTTACAATAAATACTATTTAAATAGT------------TTAGCCAGTTTTCTTCCACAT--AGTAAAAGGTCTAATCTAAAACTGCATTCAAGTGTAGTT chr4 + 94230402 25608846 25608845 25609338 25608846 25608845 25609338 493 AGATGAGGTAATTCCGATTTATTCAGACTATTATTTCACCTGATAGACTGGGAGATGAATCTTTAATGGCGAAAGACAGACAGTAAAGGTTGTAGAAGGTTAGACAGTAATCAGAAAATGCATATTAAATCACACAAATT-CACTCAGGAACCTGCCAGGAAGTACTTCTGTTTTTGTCTAATGTCAGTGCAAGGCACTCCTGCTATTACAATCAATTCTAGCAGCCATTAAGAGAATTAGTATGAGGT--AAAATGAAGCCACCAGCTCAGAGGTTACTACAGTCCCCTATCATCTGAAGTATTAAAAACTGACTGAATTT-TAAAAACAACTTACATAGCT-------AAGCAA--AAACATGAAGGGATCTGAAAACTTGTAGGTACCTCGTCCAGAAATATCTTTATAGTAAGTATTATTTAAATGTTAAGTGGAAACAACTACTGAATTTATGTTCACATACAGTGAATGTTACAATTTGTGTGGGCATTTGAATATAATT ..:.:.:..x..x.x...::.......:........:.:............x....x.............:..............:......:....................:............x.....x.::....-..:..............:...x.:...:.::..:..:x....:.:::.:x......:x.......................:...........:.....x.:..:...--.........:..:x......:.....:x....x.:xx.x.........x:..x.............:x...-:..:.:...xx..::..:x.-------.....:--...:x.xx.:.xx:x.:...xx:::..:....x:xxx:......xx.x....:.:...:..:.........:x.------------:..x:x.:...x:x.:.....--...:..x.x.x:...:.:x:xxx.....::.:.:..:.. 140M1D108M2D71M1D20M7D6M2D74M12I21M2I39M 352/479 73.5% 493/94230402 0.0% 27/479 5.6% 141196623 49017932 +14936 chr4 + 190214555 166812867 166812866 166813205 339 AGTTCATTGGTCACATGCTATCATCAAAGGTATGGCTTTTGGGGGGTTGGTGGGAGTTTACTCTAAAATCAATAAATATTTGCACTTTTATTTCCTCTCTCTTTAATGTAGCATAATGAATTTTCCATTCCAATGATTCCATTTCATTGCATAATTAACACAAATACTATAGTTATCATATCAGGGAAACACAGCTGCTTATTCTCACTGTTTCAGATTAATGTTCCATACACACATTCTGTCCATGATTAATGTAACATAAACCTTAAAATGATTTAAATTAAAATATATTTTCATAAAGTAAATCCGATCTCATTGTCTCTCCACAATTGAGAAGAC chr4 + 94230402 25611211 25611210 25611538 25611211 25611210 25611538 328 AGTTTATTAGCCATCTGTTACCTCCAGGGCCCATGATTTTAAGAAGTT-----------ACCTTGAAATTAACGAATAAAGGCATTCTGATTTCCTTACTATTTAACCAAACATAATGAATTTTCTACTTCAGTTAGTCTGTGTTATGAGATAATTAATATAAATGCTGCAGATACCGTATCAGGGAACTGCAGCTGCTTATTCCTACTGTCTCAAATTAATGTTCCATGCAGACATTCTGCTCATGATTAATGTTTCATAAAATTTAAAATGATTTCAATTAAAATACATTTTCAAAAAATAAAACTTACATTTCTGTTTCCTCACAGCTTTAAAGAC ....:...:.:..:x..:..:.x:..::.x:xxx.x....::.::...-----------..::.:....:..::....xxx...:.:.x.......:x..x.....:xx.:..............:.:.:..:.x.x..::.x.:..x:x........:.:....:..::..x..:.:..........x::.............::.....:...:.............:..x........::............xx......x:............x..........:.......x...:....x.:x.:x.:x:...:..::....::.xx:..... 48M11D280M 232/328 70.7% 328/94230402 0.0% 11/328 3.4% 141201656 49012899 +3689 chr4 + 190214555 166853742 166853741 166853824 83 CATGGTGGCACGTGCCTGTAATCTCAGCTACTTGAGAGGCTGAGGCATGAGAATAGCTTGAACCCAGAAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--....:.::...........:........x.x..x...xx:..............x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 90820545 NA +4781 chr4 + 190214555 166868591 166868590 166869212 622 TTCAAGTATAGATCATAAAATAAATCCAGGAAAACTCACATTTCTCTGAGAAACAGTAATCTAGCTTATGCAT---------ACTTTTATCTATTTAAACATAAGAAGAAAAGGACAACATTGTTGAAAAAGTCAAACTATATCAATATAATTTTCTTCA---CTTAATCCCGCGAAAATAAAACAATGGCTACATGCTATGTGTACATTTCTCAAACTACTTGGAATCAGGGCCTATTTAAATTAAACGGAATGGTCTCTGGCCAAAATTTACAAAATTTCTCTATTATC----------------TTTTTTTTCTATGCTATGATGTACTAGCATGATTTTATGTTTAGACATTAGTGGCTTCAACGAAATTTATAGTTTTGATAATCAAGCCTAA-----------------TTTTTGGAAATAAAGTTTTAAAGAACTGTATGCTAAGAAAATCAATTAAAACCAAATGTTT-------------AGTTAGATGGGAG----------AACTGTTGGTGTTT-----------TCATTAATTATTCAGAAA----ATTACAAAGCTGCTCCCAGGCTAATGGAGCAGAGCTCTCCATTTGACTCAACTGAGCAACCACAGACAAATGCCTGGGAGGACTCTCTGGTGCCTGATCTTGCAGGATCAGCAGG---AATAGCTAAAA-GGACAGTGCTGCTAATTTCA chr4 + 94230402 25618945 25618944 25619579 25618945 25618944 25619579 635 TTCAAATATTAACATTAAAAGAAAACGTAGAGAAAAAAAAACCCTTTAAGACACAGTAAACTGGGTTATAAACCTACTTAAAAATTTCATCTACATCTAAATTCAGGTAAGGTGACAATGTCACTGAAAAGACAGAAC---ACAAAAAAAAACCCCTTCAGTACTTAGTTCCACCAAAA-----------------GCTAGGTTTACATTTCTC---------------------TTTTTAAATCACAGG-----------------AGTTTACAATAGACCTCTACTATAAACAAGATAAGTAATGTTAATATTTTTGACAGAGAT-------TATTATTCAATACATATAAATACCTGATCTCTTCTGACttttttttttttttaattaatGGTAAACACATGATTCTTTTTTTTTTTACAAACAACATTTCAG---------CACTAATAAATCCCAATACAAACACGTTTTTCAAAGCCCCTTGAATTTAGGGGGTAGTTATGTTTTTAACGCTGAGTGCTTCTCATTAGCATTCATCATACATTCATTAGTGGCATCATATCAGTGTCACCATGTTAATGAGCCAACGCTTACAGTTTGATACAACTGAGCAACTGCTGATGCTTGCATACAAGGTGACTATAGCACTTTATCTTGCAGTATCAGCAGGAACAACAGTTAAAACAGATATTGCAGTTAATTACA .....:...x:.:xx.....x...x.xx:..:..xxx.x.x::..:.:...x.......x..:.x....:x.:---------.x...:.....:x.xx.x..xx:::x..::x.....::.:::......:::x:...---.:x..x.x..x:::.....---....:.:..:.x....-----------------....x..x..........---------------------.x.......:.x.x.-----------------.:.......x.xx:.....:...x----------------..xx.x..:.xx:.x:x...-------:..x...:x..::x..x.x..xxx..:::..xx.x:.x...x.xx....xx....:..xxx...-----------------.....:x...:..x:...:.:---------::....x...x:.x.x..x..x..x:.x...-------------.x....:x..x..----------...xx.x:...:..-----------....:.xx:.....xx.:----..:.:.xx:x..::x...x.:.....::x..:x...:x.x:.....:x............::.x..::xx...x.:x:...xxx..x.:.::.:.x.........x.........---..:..:.....-:..:.x...x.:.....x.. 73M9I56M3D19M3I16M17D18M21D15M17D24M16I20M7D64M17I21M9D31M13I13M10I14M11I18M4I115M3I11M1I20M 344/548 62.8% 635/94230402 0.0% 161/548 29.4% 141249646 48964909 +3084 chr4 + 190214555 166879405 166879404 166879471 67 GTGCACTTATAGTTCTAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGACCAGGA-CTTTGAG chr4 + 94230402 76033204 76033203 76033271 76033204 76033203 76033271 68 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGG ......x.:......:.......::::........x:xx.x.:.x.......:x....:.-.....:. 60M1I7M 49/67 73.1% 68/94230402 0.0% 1/67 1.5% 90846201 NA +3044 chr4 + 190214555 166885256 166885255 166885312 57 TTGCCTTATTTCTAAAATAACCACCCACCCCAACTTCAAACAAACAAACAAAAAAAT chr4 + 94230402 61069154 61069153 61069210 61069154 61069153 61069210 57 TTGCCTTATTTTTAATATAATTACCTACTTAAACTCAGAACAAACAAAAAATCAAAT ...........:...x....::...:..::x....:x:..........x..xx.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 105816102 84398453 +9581 chr4 + 190214555 166888980 166888979 166889260 281 AACAGGAAAATATCTTCAATAAAAATATAAATGATATTGGGTATTTGTATAAAAACAAACTTCATTGTGTATTTAATGACAACATCTATTG-CAAAAC---ATTTTAGTAGAGAGTGATGAATGTAAAATTATAAATATATTTTTGTCACTTACCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCTGTTTTCCTAAGACACATGCCTGATATTCTAGTTTGCACTGTATAAAAAGAGAA chr4 + 94230402 25632051 25632050 25632306 25632051 25632050 25632306 256 AAAAGAAAAGATTCTTGAATAAGACT--------------GTTTTTATTAAAAAACACACGTT----TGTGATCGCTGTGTTCTTCTATGGGCAAAATCCGATTTCCTTCTAGAATGAGCCATTAAAAATTATCA-----------TCACTCACCTCTCCTATCACTTCTGCCTGCGTTTGTGGATTTGTCAGAAGGGCAAGGGCAACGTCCTTCACATTTCACTGAGATTTGTTTTCCTGAGACACAAGCTTGATATTCTAATTTGCACTGCAAAAAGAGAGAA ..x..:...:xx....x.....:.x.--------------..x...:.xx.......x..x.:----...:x.::x..xxxx.x.....x.-.....:---....:xx.xx...:...xxx..xx........x.-----------.....:.......:..x..:......:..:::.x....::..:..x.....:..x......:.............x........:.........:.......x..:..........:.........:.x...:...... 26M14D23M4D24M1I6M3I34M11D139M 188/252 74.6% 256/94230402 0.0% 33/252 13.1% 141256929 48957626 +8348 chr4 + 190214555 166892479 166892478 166892709 231 AGAATTTTACTCAAAGAATATTAGGACATTAAAAAATGCTAC---TTTAAAAT-----ATTTTTTAGCTATACCCACTGATTGCATTTCTAATTAATAATGTTCAATTTACTTAATTACCACGAAGCTGAAATATTTATAAAGGTATATGTGAACTAAAATATCACATAAAGGGCATGCTCATTAGTCTATAATTACCAAAAAATGCAAATA-------ATGTAGAGAAAGACATGATTAATGCTT chr4 + 94230402 25642515 25642514 25642757 25642515 25642514 25642757 243 AAAAATCTGCTTACAGTTTATTAG--CATGAATAATCACTGTATTTTTAATATCATACACTTTCCTACTATACTGGCTGATTACATTACTAATTAAACAAGTTGAATTTATCTAATTATATCTAAGTTGAAATATTTATAAAATTATATGTGAGCTAAAATATCATCTGAAGAGTATGCTCATTAGGCTTTAATTA-CAGGAAATATAATTAAATTAACATGTACAGACTTACTTAGTCCATGTTT .:..x.:.:..:.x..xx......--...x..x..x::..::---.....x..-----.:...::x:......:x:......:....x........xx.x...x......::......:xx.x...:...............:x.........:...........:x.:...:.:...........x..x......-..::....::..x..-------.....x...xxx..x.::.:x...:.. 24M2D16M3I8M5I138M1D15M7I27M 166/228 72.8% 243/94230402 0.0% 18/228 7.9% 141249964 48964591 +7692 chr4 + 190214555 166908721 166908720 166908992 272 TATTATTTATTGACTTGTGCTCACGGCAAATGTAACGTACACTTTACATAACAAAGT----GGGAAATACATCCATGATCTAACATAAATGGTATATTGAAGAACATTCCTA-----GTTCTTACCGCAGCTTGACAATACAATCAAAATAGACTTTGCCTGAAGTAAAGAAATGAAGGCCTTCATCTTTTGTGTCAATTTCAAGAATGATTACCTCTCAAACAACCTTGAACAGACTAACTATATTTTTATTT--TTCTGGCATTGCTGAATTTGAAAGAAT chr4 + 94230402 25649360 25649359 25649611 25649360 25649359 25649611 252 TACTATTTACTGACTTTTTTTCA--GAAGATGTATTGCACACTTTG----ACACGGTCATTGACAAATGCATTC------------------TAAGCAGAAGAAAATTGCTATATAAACTCCTGCTGGAGCTTGATGACACAATGAAAATAAACTTTGCCTGGAGTAAAGGAATACAAGCATTCATA-TTTACATCAATTTTAAAAATGACTGCTCTTGAAATAACCTTGCAGAGAC---CTCTATTTTGATACAATTCTGCCA---CTGAATTTCAAAACAT ..:......:......x.x:...--.x.:.....x:.:.......:----...x:..----.:x....:...:.------------------..x::x......x...x...-----::..:.:.:.x.......::.:.....x......:..........:.......:...:x.:..x.....x-...:::.......:..:.....:.:.:::.x...:.......x.x....---..x......x..x:--.....x..---........x...:x.. 23M2D21M4D7M4I13M18D20M5I70M1D49M3D14M2I8M3D16M 178/241 73.9% 252/94230402 0.0% 42/241 17.4% 141259361 48955194 +8279 chr4 + 190214555 166912613 166912612 166912769 157 TCTTTACCTGAAAAGAGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTGCAGGTGGATAATATGGG---ACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTTAAAAAAATAAAGCAAGCATAT chr4 + 94230402 25652115 25652114 25652271 25652115 25652114 25652271 157 TTCTTACCTGAGATGAATATGTGTGACCATCTGATCCACAAACAGGATTGGTATAAACTACTGGACACTGCTTGCAGTTTGATGAAATGGGACCACCCCTCCACTGTTTATGGCCTAAACCAGCCTCTTTCATACTG-TAAGTAAACAAA--AAGTATGT .::........:.x..:..x..:...........x...........::...x...:..:.....:............x.x...:.x.....---............::.....:...xx..x..:........x...-...:x...:...--...:..:. 91M3I43M1D12M2D8M 123/154 79.9% 157/94230402 0.0% 6/154 3.9% 141260498 48954057 +3026 chr4 + 190214555 166937360 166937359 166937408 49 TATATACATATACATATATATACACACACACGTATATATTATATGTTAT chr4 + 94230402 41650593 41650592 41650641 41650593 41650592 41650641 49 TAAACATATATATATATATATACACACACACACGTATCTTATGAGTTAT ..x.:.:.....:..................:::...x....:x..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 125286767 64927788 +20532 chr4 + 190214555 166971984 166971983 166972438 455 TGGTATGAGAGAATTATAACTGGATAGATACATAATAATTGTGCTAATCCAAGTTATATAATAATAACAT------TATGAAGGAAGCAGTGTTGTTCATTATCCCATTGCAAAC-CACTACTATAAATTCAGCCTCTGTGGTGCATCACTTCCTGTGCAAACAAACACTGATAATACAACAAGCTGGAAATTCTTCAAAACTAGCAGATTGATAGCACAAATTACTCAGCGAAAGAGAAAGCCTTCAGCAGCTTCAGAAGTGCTTGCTACATAAGCATGATTAAGTGTTTCTGTACAAAACCACAAATCACAATAATGAATCAGATGAAAATCTTCAATAAGAAACTTAAATGCACCAGCTGGCCTTCATCACTCAGCAATGTTACAATGTAAAATGATGACATTCTAAATAGCCGGGTTGGCAGCCTCAGCAGACTGT--CTCAAGTTAGCTCCCTGTTTTG chr4 + 94230402 25671090 25671089 25671536 25671090 25671089 25671536 447 TGGTATGA-----TCACAATGGCAGAGCTGCACAATTATTGAACTAATCAAAGCTACATAATGTGAGCATGAGCAGTGTGAATGAAGTAGT-CTGCTCATTAACCCATTACAAAAGAATTACTGTAAATTCATCCTACGTACAGCATCACTTCCTGAGCAAACAAACA--GATAACGCAACAAGCTTGAAATGCTGCCAAGCTGGCAGACTGGCAACTCAAATCATGCAAAGAAACAGAAAACCTTCAGTAGATTCAACAGAGCTTGGAGCATAAGAATGATTAAGTGTTTCTGTGTACAACCACAAATCACAGTAATGAATCAGACTAAAATTTCCAATAAGAGACTTAACTACACCAGCTGGCTTTC----TTCAGCAACATTATAATGTAAAATGATGACATCCT-----GTAAGTGTTGCAGCTTTTGCACAATGTGCCTAAAGCAAATCCTTTGCTTTG ........-----.:.:..:x.x.x..x.:..:...x....x:......x...:..:.....:xx.:...------.:....x....:...-:..:......x......:....x-x.:....:........x...x:..:xx.............x...........--.....::.........x.....x..x.x..:..:.....:..::.:.x.....:.:x..:x....x.....:.......:..x....:x..x.....xx:......x..................::.x..............:............:x.....:.:........:......x.:...........:...----:.......::...:..................:..-----.:x:.xx.x.....:.:x...x.x...--..x...:x.:::.::..:.... 8M5D57M6I15M1D23M1I52M2D199M4D35M5D27M2I22M 335/438 76.5% 447/94230402 0.0% 26/438 5.9% 141300894 48913661 +10809 chr4 + 190214555 167000276 167000275 167000490 215 ATATTTATACTCTGCAGTTATTCCTGGTAAGGAGCGCTGTTCAATCAGT----GGGATTAAATTTAACAATGTTTACCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGATCTAAAGCTAAAAAAATTGCAAAGAAAATATTAA chr4 + 94230402 25679938 25679937 25680150 25679938 25679937 25680150 213 ATACTTATGGTTTACAGTCAGTCATG------AACACTATTGAAACAGTCTATAGGATTAACCTTTAAAGTATTTACCTGTGTGTAAGCCTTCGGTGACTAACGCAAACAGCAGTTTGTTGATCCTGCGCAACACAGACCTTATGACGACTACACTTCATCTTTAAACATGGGTCTTTAGCCGGATCTAAAGCTAGAAATAATTTAAGAAAATCGTTAA ...:....:x.:.:....:.x..x..------.:.:..:..x..x....----:.......x:..x.x.:.:...................:..........:...:..x.....:..xx:...:..x....::..x..:.....:........:...........:.....:..:.....:.............:...x.x.x:..::...x::.... 26M6D17M4I166M 159/209 76.1% 213/94230402 0.0% 10/209 4.8% 141320338 48894217 +3766 chr4 + 190214555 167046225 167046224 167046479 255 GGCTTCTTTTGAGTTTTGTTTTGTTTTTGTTTTTGCT---TTATTTTCTGCAGCTTAAAA---ATAATATGCCTAGATGTGGGTGGTTTTCTTTTGCATTTATTCTTCTTGGTGTTCCCTGAGCTTCCTGCATCAGTGCTTGTTGTCTGACACAAATTTTGAAAAATTATGTCATTATTGTTTCAAATATTTATTCTGTTCCTTTATTATCTTTTTTTTCTTTCTGATATTCTTTTTTTTTTTTTTTTTTTTTTTTTAACA chr4 + 94230402 22513346 22513345 22513552 22513346 22513345 22513552 207 GGTTTCTCTT---TTCCTCCTTAGTTCAGTCTCTACTCAATCCTTTTCTGACATTTGAAGTGTCTGGTTTGCCTAGAAGTGTGTTGTTT------ACATTTAT-CACATTGTTGTTCTCT------------TCAGAGATTGTT---TGCCTCAAGCTTC----------------------------ATTTATTCTGTTCTTCTGCTAGCTTATTTTCAATTGTCA-GCTGTTTTTTTTTTTGTTTTGTTTTTTTTAACA ..:....:..---..::x::..:x..:x..:.:.:..---.:x.......xx::..:..:---x.::.x........x...x..x....------:.......-.x:x...x.....:..------------....x.x.....---..x.x...::..:----------------------------.............:.:.::..x...x....:xx..x.x.-::.x...........x....x............ 10M3D24M3I20M3I26M6D8M1D16M12D12M3D13M28D39M1D33M 143/201 71.1% 207/94230402 0.0% 60/201 29.9% 144532879 45681676 +8165 chr4 + 190214555 167062429 167062428 167062819 391 TTCTAAAAGTACAATGATTATGAACA----TGTAAAGGTTTTTATTTTAAA------------ATAGT--TAGATTCTTACCCTGATCGAAGGGTTTTCCTGGACTCCAAGTGCGGAAATAATCATCCTAAGG--GGGAAAATAATGTGAATTGAGT-GTATACAAGTAATTAAAACGCAAGGGTTCATATAAAATCTAAAATTAAAT-ATGAAACACAGAAGCTGTATACAAACCTCTACTTCCT-GCAATGGCAAGCAGCAAATTATAAAATAAATAAATAAAAATAAAAAAGAAACAAGAGAAAAAGAATAGTTATCAAAAAGGAACACAC--TGTTTTCAAGTTACAGAAATGTCTTTCAATAAACCTGTTCATTTTCATT--GCAAGT-CAATGGTTACTATAACAATTTAACT chr4 + 94230402 25693999 25693998 25694366 25693999 25693998 25694366 368 TTCTAAAA----------TAGGAACACATTTATAAATATTTTAATCTTAAACCATACAAAAAAATAGTAGCAGAATCTTACCTTGATCAAATGGTTTACCCGGACTCCATGTGCGAAAATAATCATCCTGGAGAAGGAGAAACAACCTACATTTAGTAAAACATAACAAATCAATGTGTA------CATCCAAAAGT---AATTGGATCATAAAAGACAAAAGATATATACCAACCTCTACTTCCTAGAAAAGGCAAGCAG--------------------------TGAAAAACAAACAAGAAAAAGATTACAGTCATCATAATGGGACAAATCACACATACAGAATGAAACAGTGTTTTTCAG------AGGTCATTTGCACTCATCAAGTAAAAAGGCTACACAAACAATATTACT ........----------..x.....----.:....x:....x..:.....------------.....--:...x.......:.....:..x.....x..:........x.....:.............:::.--..::...:..:x.:x...x...-:x.:.:..xx...:..x::.:.------...x:....x:---....::..-..:...x...:...x.:.....x..............-.x..x.........--------------------------.:.....x........:...:.xx.:...:....x..x..:...x.:--:::x.x..::x.:x.:x.:...:.....:------x.x......x..:.--x.....-x..x..:...xxx......x.x... 8M10D8M4I21M12I5M2I63M2I22M1I22M6D11M3D8M1I37M1I14M26D47M2I29M6D14M2I6M1I25M 248/340 72.9% 368/94230402 0.0% 79/340 23.2% 141368430 48846125 +3358 chr4 + 190214555 167064206 167064205 167064272 67 TTTTTTAAAAAATGAAACAAAAAGAAAAAAATGACATCACTGTAGTTGATATATTTATGTCCAGATA chr4 + 94230402 15721826 15721825 15721888 15721826 15721825 15721888 63 TTTTATAGTAAGTGAAG----AAAAAAAAAATAACGTCGTTGTAGTTGGTATCTTTAAGTCCAGATA ....x..:x..:....:----..:........:..:..::........:...x....x......... 17M4D46M 50/63 79.4% 63/94230402 0.0% 4/63 6.3% 151342380 38872175 +12167 chr4 + 190214555 167079243 167079242 167079764 522 TGCTAGTCTTCAAAACTTTCAAAACTATTAATGACTTTTCAAAGCTTCCCACAAAATTGTTTTGTCAGTATCCATTCATGAGGAACAACCTATATCCCTTGATAGAATCTAATTTATGCTCCTTGCTGTGTTTTCTTTGAACATTTCTGGGTTTAATTATCTGGAATAAACTGTTCCTCTTGACAAGAAATACTGTTTCTTGGTTTAATTCCATGTCTATAGAAATTTAGAATCAGCATCCAATAGAAATGGGGATAAATCTTTA------TAGACTAAATACACCAAGAAAATAAATGTTCATGGAACATGGTGAAAAGGGCCATTTCCTTAGTTTTCATCAGTGATTAGATGCCAAAAACACATAAGAAAGAAA--AAAAAATCAAATGTAATGGTCAACTTCTCTGTGAATGTGTGATTAATAATGCCAGTCAATTGAATCTTGTAAGCAGTTCAGAATGTTGTTAATTACAGTTCAGGGAAAGCAAATTCGATATCAAACACTTTTAAGAAAAAGTAAATGGGATT chr4 + 94230402 25702448 25702447 25702944 25702448 25702447 25702944 497 TGCTA--CTCCAAAGTCTTAAAAAACATTAACAAAAATTCAAAATCTTCCTCAGAACTGTTTTGGCAGTACCTGTTCATAGGGAAGATCATATATTCCTTGACAGAACCTAATCTCTGGTTCCTTGTAGGTTT---------ACCTATGGATTGAATTACCTGAAATAAAACATTTCCAATGATAAGAACCTGTGTTATTTCATCTCATTCTGTGAATA---AGATGCAGTATTA---TCCAATAGAACTAAGAAAGAAATATCAGTTAAACAAACTGAACACGCTGATACAATAAACAACCACTGAA-AGAATGAAAAAGACCATTTGACCAGCTTTAATTGATTAACAGATCCCA------CATTGAAAGGAAATCAAAAGAGCAA--------GCCAGTTTTGCAAGAACTGAATGACTCCAATTGCTTGTCAACTGAATCCCGTCAGCAACTCACGGGGTTGATAACTACAGTCCAGAGAAA-CAGGTTCAAAGAGGAGTATTTAAAAGATGGACTGAAATGGTTT .....--..:....:::..x....x:.....::.xxx......:::.:..x..:..:.......x.....:.::.....::....x.x.x.....:......:....:.....:.x..x.:.:.xx.:x....---------.::.x...:..x.....:...:......x::..:.:xx...:.....x:xx....x:..x:.:.x....::..xx..---.:..x:..x..:.---..........x.::.:.x:..x:x.:.------:.:...:..:..:.::.x.x......::x:..:x...-.x::......:.:......xx::..:...x..:::.x.x:....x...------...x::..:....--....:.x...--------.:..::..:x.x:x:.x..x:...:.xxx.x...:x.....:......::..x....::...x::x....x...:......:...:....-..::...:.x:xx:.::.:..xx....x::.x.:..xx..x.. 5M2D126M9D77M3D13M3D27M6I37M1D48M6D13M2I10M8D90M1D43M 312/489 63.8% 497/94230402 0.0% 41/489 8.4% 141376795 48837760 +3005 chr4 + 190214555 167100430 167100429 167100470 41 TTCTTTCTCTCTGTCTCTCTCTCTCTCTCACACACACACAC chr4 + 94230402 75248047 75248046 75248087 75248047 75248046 75248087 41 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC .:...:......x............x.x............. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 91852383 NA +3197 chr4 + 190214555 167100434 167100433 167100475 42 TTCTCTCTGTCTCTCTCTCTCTCTCACACACACACACCCACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::..x............................x.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 91852387 NA +3025 chr4 + 190214555 167116897 167116896 167116950 54 TTTTGTGTGTGTGTGTGTATATATATATATATATATA-CTTTTGTGTATATGTAT chr4 + 94230402 33250998 33250997 33251052 33250998 33250997 33251052 55 TTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTAT ....x...................:.:........x.-:......x.:.x.x... 37M1I17M 45/54 83.3% 55/94230402 0.0% 1/54 1.9% 133865899 56348656 +3411 chr4 + 190214555 167131464 167131463 167131532 69 GTGGTGGCACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......-----...x....:.:...........::........x.xx.x...x..........::.:.. 6M5D58M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 91098263 NA +3445 chr4 + 190214555 167163077 167163076 167163191 115 TTTTCTTAGCTTTTATTATAATTTTTATTTACATACAATTTTGTACTACTTGAATGCAACAATTAAAACATAGGTTTTTTTGTTGGGGGATTTTTTTTTT----TTTTTTTTGCCAAAC chr4 + 94230402 85013368 85013367 85013486 85013368 85013367 85013486 119 TTCACTGAGCCTTGAACACATCTTCTATTTTTATTTCCTATTTTACGCATTTAATAAATCTGTACACATACAGGTTTTTTTGTTGGTGGGTTTTTTTTTTCTAATTCTTTATACCAAAC ..:x..x...:..x.x:.:.x:..:.....x:..x:xx.x..x...xxx..x...:x.x.x:.xx.x.:.:...............x..:..........----..:...x.:...... 100M4I15M 77/115 67.0% 119/94230402 0.0% 4/115 3.5% 82149709 NA +3017 chr4 + 190214555 167163150 167163149 167163199 50 GTTTTTTTGTTGGGGGATTTTTTTTTTTTTTTTTTGCCAAACCTAAATTT chr4 + 94230402 39845839 39845838 39845888 39845839 39845838 39845888 50 GTTTTGGGGTTGTGGGGTTTTTTTTTTTTTTTTTTGCTAAATCAAAAATT .....xxx....x...:....................:...:.x...x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 127317311 62897244 +3039 chr4 + 190214555 167172718 167172717 167172785 68 ATATGTGTGCATATGTATGTATACATCTATATATGTGTGTGTGTGTATATGTATATGTGTTTATGTAT chr4 + 94230402 86633923 86633922 86633990 86633923 86633922 86633990 68 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:x.:....:.::...x.....::.:.:....::..:......:....::.x.:.:..:x.x..... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 80538795 NA +3482 chr4 + 190214555 167186487 167186486 167186569 83 CGTGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCATTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--....:.:...........::.:......x.xx.x...x..:..........:..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 91153290 NA +3030 chr4 + 190214555 167194163 167194162 167194220 58 TTTATTTGCATTACTAAGGCAGGTTTTAAAATTCTCTATGAATATTTCACTTCTGTCA chr4 + 94230402 8256601 8256600 8256658 8256601 8256600 8256658 58 TCTGTTTATTTTAATATGGTAGATTTTAAAATTTTCTGTAGATATTTCACTTATATTA .:.:...::x...x..x..:..:..........:...:.::...........x.:.:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 158937562 31276993 +3608 chr4 + 190214555 167205142 167205141 167205237 96 TATATATATTTTATATATATATAATATATATTATATATTATAGATATTTTATATCTATAATATAT---ATTATATATTATATATTTTATATCTATAATA chr4 + 94230402 26320246 26320245 26320344 26320246 26320245 26320344 99 TAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ..x..x...:.:.:..:......x..:...........xx..x...:xx.....:...x..:...---..x:......x.xx:.x..:...x.:..... 65M3I31M 69/96 71.9% 99/94230402 0.0% 3/96 3.1% 140884896 49329659 +4388 chr4 + 190214555 167205264 167205263 167205403 140 ATCTATAATATAT---ATTATATATATT-------TTATATCTA--TAATATATATTATATATTTTATATATATAATATATATTATATATTATATATATAATATATATATTATATATTTTATATATATAATATATATATTTTATATATAATA chr4 + 94230402 26320195 26320194 26320344 26320195 26320194 26320344 150 ATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATT-TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA-GTATATTTTTAGTATTGTATATGTAATA ..:x....x....---x......:....-------.x....:..--:.::x..x...-...x.:x:..:......x..:...........xx......:.......x......:...:.x...-:....x.x.xx:....x.....:..... 13M3I12M7I9M2I11M1D65M1D28M 104/138 75.4% 150/94230402 0.0% 14/138 10.1% 140885069 49329486 +3838 chr4 + 190214555 167206184 167206183 167206266 83 CATGGTGGTATGCACCTGTAATCCCAGCTACCTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCGGGAGTCGGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--....x....:.:........:..::........x:xx.x...x...........:.:..::xx...:..:.. 9M2D72M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 91172987 NA +16051 chr4 + 190214555 167233919 167233918 167234653 735 CGGCCGCGGCCCCCGCCTCGGAGCAGCGCGCGCGTGTGCCCGGGGATGTGGGTGCGCGGAACTTACGTCTCGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTGAGAGATTGTGGTGAGCCATTGTTTATCATCCAGAAAATTACCGCCGTCCGACCGCCCCCCGGCTGCAGCCACCGCCGCGGCAGCTGCGAGAGACTGACTGCACCAAGCGGCTGCACACACACACAGTACGGCTGACACCTTGAGCATCTGG--GAGAGGAGACACAACGGGGGGTGGGGGGGCATGTCAGTGTCAAATAAGGGGTACGAAGCCAGGAGCGACCCTGGAAAACATGCATTAGCA-------ACGACGAGGGTAGAG----GGAGGAGGAGACAAGCAGAGGCAAGCGTGTCCCCTCCCCGCAGGCTTTACCCCCAAAAGCCGGGCACTCACACACACGCAGACCCAGAGGAGGAGAGGTGGGTATAAGGAAGCAAGCCCCAGCCGCAGCAGCCCGAGCGGGCACAAAACCGCTTCCTGGCACATCACCTTGTTGTGAG--CCAGCACTGTGCTCGCAGCTCCTGCTGGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTGCTGCACGCGCCGCCGTCTCGAGCCGTCCACTCAGCTCCCTGCGCCCGGCGCGCTCCCCCCATCTCCACCCTCCCTTCGCGCGCGGATCTCCAGCTTACTCCCCTCCGTTCCCCCTCCCTCCCC chr4 + 94230402 25754615 25754614 25755193 25754615 25754614 25755193 579 CAGCCCTCGCCGCTGCCCTCGAGCCGCGGGAGCGGGG---CGGCAAAG-------GCTGAACTTACGTCTCGGAATTTGTTCCATTGCCCGACCTCCTTGTCGTACTGGGAGATGGTGGTGAGCCATTGTTTATCGTCCAGAAAATTGCCGTTGTCCGCTCTgcccccggccgccgccgccgcc------------agcgccgggcTGCACCAGGCTGCCGCGCACACGCACACCAGGGCCGCCGCCTTCAGCATCTGGGCGAGAGGAGACACGAGGAGCGGT-----------------------------TACGCAcccgcgggcggccggcggggacgggcg-cagcgcgcccACCCGAGGGGGGCAGAGGTGCGGGAGGGGAAGCGGGAAAGGGAGCCCGAGTCGCTGGGCTGCGGG----------GGAAGCGGG----------------AGAGACGGAGGGAGAG--------------------------GCCGCGGCAGCC--------------------GCCCAGCCCGTCACCTTGCCGCAAGCCCCGCAACTGCGCTCCTCGCCGCGGCCGGAAAGGCGGCCCCGCTCC-------------------------CTGCCCGCGCCGCCGTCTGCAgcc--ccgcgccgcgcc--gcgcc--gcgcgctccgcccgcctccggccccgccccgcgc----------------caccccgccactccgccaccccgccc .:...x:x...x.:...::x....x...x.x...x.x---...x:.x.-------..x..........................:..:.....:........:.....:.....x....................:...........:...::.....x:.xx........:..x...:.....------------..x.x.x.:........:..x..:..:.....:....x:.x...:.x.:....x.........--............:.x.:.x...-----------------------------....x.x..:x.:...:..xxx.:::..:x..:-:...:-------x...x.:...:....----..::.:...::.::.x.::..x:xx..x...x.:xxx.:..:..----------::....x..----------------...xx.:....::...--------------------------.....:......--------------------x..::..x.:........::.::..--..:xx....:....x:x..:x.x..:.....x..:....:....:-------------------------....x.............xx....--..:.x.x..x..--.....--.........x...::....:x..:.x.::.....----------------.x....x..::...x..x...:x... 37M3D8M7D129M12D63M2I22M29D33M1D5M7I15M4I44M10D9M16D16M26D12M20D25M2I45M25D24M2D12M2D5M2D34M16D26M 409/564 72.5% 579/94230402 0.0% 186/564 33.0% 141479304 48735251 +3352 chr4 + 190214555 167288075 167288074 167288168 94 ACCCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAAATTTTCCTCCATCCCTTTATTTTG chr4 + 94230402 77347636 77347635 77347718 77347636 77347635 77347718 83 ACTCCTACTCTATTTTCTTTGTCTTTTTTTTTTTTTTTTAACTTGTTTGTAAATTCTACTTGGTAGGT-----------CATCTTTTTGTTTTG ..:...:..:.x....:...x.:................xx:..x...x.:xx...:.:...x.x...-----------....::...:..... 68M11D15M 61/83 73.5% 83/94230402 0.0% 11/83 13.3% 89940439 NA +3380 chr4 + 190214555 167290850 167290849 167290897 48 TTTTTCCTGGTGTATTTAGTAAAAGAGTGCCCCCTTGTGATTTCTGAA chr4 + 94230402 25767118 25767117 25767165 25767118 25767117 25767165 48 TTTTTCCTAATGTATTTAGGAGAGCAGTGCCCCCTAGTGATTTCTGAA ........::.........x.:.:x..........x............ 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 141523732 48690823 +3360 chr4 + 190214555 167306614 167306613 167306687 74 TATATATACTCATATATACATACATACATATATGTATACATATATATGTGTGTGTGTGTGTGTGTGTATATATA chr4 + 94230402 21109222 21109221 21109295 21109222 21109221 21109295 74 TATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCA .....:......:......x::::...x....:....::.:x:..::x.x.....:.:.....:..x....::. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 146197392 44017163 +3001 chr4 + 190214555 167314454 167314453 167314514 61 CTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAATAAAATAC chr4 + 94230402 86423803 86423802 86423863 86423803 86423802 86423863 61 CTCTAAGAAGGAAAAAAAAAAACCAAAAAAAAAACAACAAACCACCTTAAAAATGAGATGC ....x.:..::...........xx..........x..x...xx.xx........:.:..:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 80890651 NA +3201 chr4 + 190214555 167327549 167327548 167327670 122 TTCTGCCTGGGCTACAGAGTCAGACATCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAACCTA-ATTG--CATGATCTGTG-GTCAGACGTCTTGGTCTAAGCCA chr4 + 94230402 82907876 82907875 82908001 82907876 82907875 82908001 126 TCCTGCCCTCTCTGGAGATTCAGAAATGATCTCATTCAAAACAGACAAACAAAACAGAAAAAGCAAAAAACAAAAAAAACCCCACAGTGTTCGTGGTCTGTGCTTCAAGACTTTTGCTTTGGGTCA .:.....:xxx..:x...x.....x..x......xxx....x.:.x...x....x.:.....:x......x....::..x..:.-.x..--.:..:......-x...::xx.:...x.:.::.:.. 84M1I4M2I11M1I23M 82/122 67.2% 126/94230402 0.0% 4/122 3.3% 84419673 NA +3075 chr4 + 190214555 167329490 167329489 167329522 33 AAAACAAACAAACAACAACAACAACAAAAAAAC chr4 + 94230402 22215900 22215899 22215932 22215900 22215899 22215932 33 AAAACAAACAAACAACAACAACAACAAAAAAAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 145113590 45100965 +7183 chr4 + 190214555 167332887 167332886 167333288 402 TTATATAGCAGCCAAAGATA----TATTTTATATCAATCTTTAATACACCATTTGTTTGTTTTCAAGTCTGGAAGTAGATCT--ATCAT------TTAGCTAGA------GACAGCTGTTCACAGAACTGTCATTCTTTATGGTGTTC---ATACATTTTCTAAAGAGAGAACTTTTTTTTTATTTCTTTCTTTTAGAACTATGTTAAGTCACACAAAATGAAACAAATTTTAAAACATGATTTCCC-AATGAATTATCACATTCTCTATGACTTAATTTGTCTTGACAATTTTTGTAATGGCAATACAGTATTTTTTCTGACAAGTACAATTAGGTTTGGTG-AAGCATACTTAT----TTCGTGTTTCTGAGAAAGCAACTCAGCTCAAATAGAGAAATCTCTGTGACAGAATGGACAGGACAAAAG chr4 + 94230402 25781078 25781077 25781478 25781078 25781077 25781478 401 TTATGCAATAATCAACTATAATCGTTTTTTATTTCAACTTCTCATACAGTGTTTTTAT-TGTTGAAATCTC-AAGTACATTTTCATCATCAGGAATCACCAAGACATTTTAAAAGCTTTGCAAGTAATTGCCATTCT--ATAGTATTCTGCATGCTTTGCCTGAAGAGCA-----------TATTTTTTTCCCCCTGATCTACACTAAATTCCATGAAATGAAGGAAATTGTACAACATTATTTCCCTTATGAATTATCATATTTCCTGTGATTAAATTT---TGGGTAGTTATAACATTATCA-------GTTTCTTCTGACAAGTACAATTACTGTTGGCATGAGCACCCAAATTGTATTCTGCTTTCTGAAGAAGCAGGTCGTTATGATCAGTGAAGTCTCC---AGCAAAAGGAAAGCATAGAAG ....::.::.::...xx...----.x......x....::.:.x.....x::...x.x.-.x..x..:...x-.....x..:.--.....------.:.x.x...------:.x....x.x..x:x..:..:......--..:..:...---..:.x..x:..:.....x:-----------.....:....::::x..x...:::...:.:x..::.......:x.....x..x.....x.......-x...........:...::..:...:.x.....---.x.::.:..x.x::.x.:x..-------:...:..................xxx....::-:....:x.xx..----...xxx.......::.....:x..:x:x::.x:..x...:....:---.xx:..x...x..x.:.:... 20M4I34M1D12M1D10M2I5M6I9M6I27M2D9M3I19M11D66M1I32M3D21M7D32M1I12M4I45M3D21M 252/374 67.4% 401/94230402 0.0% 55/374 14.7% 141551809 48662746 +3240 chr4 + 190214555 167339753 167339752 167339835 83 CGTAGTGGCGCGTGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGTAGGACAATCGTTTGAACCAGGGAGTCGGGGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:..::.--....:.:............:........x:xx.xx..x.::.......x:.:..::xx...:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 91306556 NA +22914 chr4 + 190214555 167368125 167368124 167369499 1375 CCTTTTGAACATTATCTTTAAGTCCTCGATTATTATTTTCTGTTTAGCAGTGGAATGTAAACAAACCTCATCATTT-TTTAAA-----AGTCTCACACTAGGCTTTTTCATAACACATTAACTATAATAAGCAGAAGAGGCGGGGTGCTAACTGCTATAGTGGTTCGATCCATTTGCTAAATGATGAGAACATCAGTAGTTCATAAGAATTAGCTGCTAAAACATTTAAAGTCAGACAAACCAAGCCCGGCAATGCAGATAGTAATCTTTTGTGTGTACTAGTTGGCATTCAGACACTTTCTTTTCAGTATGAAATTTAAATTCATT-TTGCTTCTTGCAGCAGTTTATATGATCAAAGATGGCAGATGTATAATGTGTCTAG-TCTGATTGTTCAAGGTA--CTGGTCAGGCCCAGCAGACAG-TATGCAGATGTCTCGTACTTAGTGAAAATCAGTCCTACAAAT-TGTAAAATGCACATTGAGTGTCATCTGCTGAGAAGAA----CCAATTATACAAAAGAAACTGAAATAGCATAAATATCAAAATATGAAATAATTA------TTGGAATAGAGGACAATTCACTCCTAAGTTTGTATCATGTTATCTGAGTCC---AGTTCTTACATTGCTGATGTCTCAAAGTTTTATG----------------TCACCAAACCATTGAATATAGCAG---TGGAA-----------TTTTTTTTCTTA--------TTTAATGTATTGCTTTAATACCTGATGTATACTTACATATTCATAA-AAAAGTAATTTTAATTATTTTTCTAAAAATCTCAT-------TTTAAAATATTTAAGTG-------------GGCTCCTGAAGCAT-----AAGTAACAATAACAAATG----ATAAGGTTT-----------------------------------TTAAGCACTTAACAATTTTTAAGTCA--------GAATACTAATAAATATACACAACATGATCGATATTAGTAACTGTGACAGGCAGTGCTTAATTAAGTAAACTGATTGTTGGAGTTACGAGACTGTGTCCTAAAAAATTAAGACAATCATTGCTTCACTAGCTTTAATATTTAAAAAAAGTGGTGTTAACTGAGATGAATATATTGCCAGTTATAATAAGATGAAGAGGAGATTTTTAATCTGCAAAATCAAAGGGAAAATTCCTACATAGCTGCACCATACTGAAAATTTGTTTTGGCAAATGAT-------TCTTTAATGGCTCAAA------TTCAGCGCCGATCTTATAAAACAACCTTAATACACACAAGGAAGTGAATAGCTGAAATCCTAAAATCCTTAAATCATCAATGTTTCAGACTAAATGATTTTGCTCAGGCTAAATCCACATAGAGTTCTTTA---TTTTTCATAAGTCCCAACTGTAATCCTTCATT-AAAATTTTGATTGAGTCCTAAAGATATAAACCTCTGTTAGACAAACTTTTCCACTAACAATTTTTGCTACGAGTACAATTAATT chr4 + 94230402 25796466 25796465 25797878 25796466 25796465 25797878 1413 CCTATGGAATACCATCTAGATCTACTAGATGGTAACATGCAACATGGCTACAGATGCAAAACAAAGCTAGTCACTCATTTAAAGAAATAGTTCAACACAGCCTTCTCTCATGACACATTAAATATGATGGGCAGAAGTGGCAGGGTGCTAATTACTCTAGTGATGTGATCCATTTTCTAAATAGTGAAAGCATCAATAATTCATCTGGAGTGGCTGCTAAAAAATTTAATGTCTGACAATCCATGCTCAGAAAATACGAAGATAATCTTTGGTGTCTACTAGTTGGCATTCAGAGACTTCCTTTTCATTATAAAATATAAATGCATTGTTCCTACTTGAGGCAGTTTAGTTTATGAAAGATGGCAGATGTATAATGTGTCTAGCTTTGATTGTTTGAGGTAGGAAGGCAGAGCCCAGCAGACAGAAATGCAGATGTCAAATACTTAATGAAAATGAGTTTTACAAATACATTTAATAAAGTCTGAATGGTTTCTGCTAATAGTAGCAGCCCAATTACACGGAAGTGAGCACAGCTATCTAAATACAAAAATACAGAATAATCAGGTGGTTCTGCTGACTGGATATTATACTTCCAGTTAAGAAAAATCCCTTGTTTATTCAAAAGAGCTTAATTTG--GCTGCATCAGCACCTCATGAAGAGAACAATAATGACTACAAATTCAAAGTATATTGCAGAAATGGAAAGGTAATGTGTTATCTTTGCTTACATGAATTTCTAATTTATT--TTTGTCCATTGCTGCAGAAAAACAAATAAATGATAAAAGCCTGTCTATTTAGCATTGGCAGAAAATAATAAGCAGATATATACTGTTTGAATGGGGAAAGTTAGGAGGGCCTTACTGCATCTCTCAAAAAATAGTAAAAAATGGAATATAAGGATCTGTGTGAACACCAGCTGCAAAGAAAAGCTCTGTGGTTCAGCTATTCACAGGTATTTAGGCACTCAACTCCAGTTCTAATAAGTACGTTCTCTTAGATCAGTGACAATTAGATGGTCAAATAGGAATTAGATTCTTAAATGGCTTTATGGA--TATGGGCCCGTGTCCT---AGACTGAAACAG-------GTTAAAAGCTTCAAT------------------------------------------------TAGAATGTAAGTGGG--TCGTAATCT--------------AACAGTCCAAC------------TACAAGAAAATGGGTTTAGC-AATGCTATTTCTCTCCTTAACTGCTCAAACAAAATTTTAATGAAGATCTTATGAAACAATCTCACCATACACA--------AACTGCTTAAGCCCTCAAATCCTTGAATCATCAATATTTCAGTCCTCAGGATTTTTCTCACCAGAAGCCAACAGAGAGAGCTCTATGTTGTTTTCTAAGTCCCTGATGTAATCCGTTATTAAAAATTTAGATTGATCCCTAAAGAGATG-------GTT---CACACTTTT----GAACATTCTTGCCTCTGAGAACCAATAATT ...x.x...:.::....xx.xx.x..x...x:.x.:x.x.x::x.:..x:::..xxxx.......x..x:...:.:-......-----...::x....x:xx:.:.:....:.........x...:..::.......x...:.........:.:..x.....:.x:.........x......::...:.:.....:..:.....xx.:.x.:..........x......x...x.....x...x..:.:.x..xxxx..x::........x....x..................x....:.......x...:....x.....x....-..x..x....x:........xx.x..x............................-.:........::.....--xx..:x::.............-x...........xx:......:.......x...::.......-::.xx...:x.xx:...:..x:x......:.x.:x.:----.......:..::...x:.x::x.::x::x......:x......:::......:.------.:x.xxx.xx...:.x.x:...:.:.:x.xx.x.xx..x::x.x.xx:.:.---..xx....xx...--.x..:x...:x:::.:...----------------::..x..x:..xx.x....x....---.....-----------.x.:...x....--------.:....x....--...:x:xx:..x..:.x.xxx...x..xx..:.-.....:xxx.:..x...x:x..xxx.:..xx.x..-------.x..x.x.:...:.:..-------------..x:.:.:xx....-----..:x..:.:...x.....----......x.:-----------------------------------..x...xx..x...:x.x..x..x..--------x.:.x.......:..:::x.xx:xx....::.:x:.:.x.xxxx.x..:::..x:x...:x.xxx....:x.x..xx....--..:.:.x.:.......---.:.:.:.:...:-------x.:.xx.....:...------------------------------------------------..::...x.::x.:.--.:x......--------------..x.x...x..------------...x::...x.x.x...:..-....x.-------..:....:x.......------..:.::.xx........:......:..:.x:.:.....--------..:x...x..::...x........:..........:......x.:xx.x......x....xxxx..::.x...x....xx..:..---.x...:x........x:x........x.:...-.......x......x:........x..:-------...---..x......----x....x.:..xx..x:...x..x.x..... 76M1I6M5I239M1I55M1I17M2I21M1I42M1I37M4I54M6I51M3I13M2D19M16I24M3I5M11I12M8I11M2D33M1I35M7I17M13I14M5I18M4I9M35I26M8I81M2D16M3D12M7D15M48D15M2D9M14D11M12D20M1D6M7I16M6I38M8D85M3I32M1I28M7D3M3D9M4D30M 849/1260 67.4% 1413/94230402 0.0% 268/1260 21.3% 141571659 48642896 +8791 chr4 + 190214555 167383218 167383217 167383488 271 CATTGATAGAGGCACTTGCGATGTAAAAATATTACCCTCTCTTTCTCA-TGTGTAGTTAAAGATTTACTTTTGTAGACAATTTAAACGTGATCTATTCCA--CAGTGTTGAAGAAGAGCCTCTTCCACAGATGTACTGTCTCCACATAGGACTAAAGAG-ACCCTCCAGCCGGTTACTATGTGTTTGCTACCTTTGGG-AGCTCTTATTAGTTAGCTGTCATCACTAAAAATTCAAAGCACAGGATCAGAGAAGCA--GTCATGCATGTTTTTTGCCC chr4 + 94230402 25800100 25800099 25800375 25800100 25800099 25800375 276 CAGTAGTTAAAACATTTACTGTGTAAATAT-CTGCCTTTTATTCCTCAGCAGGTGGTTAAATCTTCACTTTTGTGATAACTCTAAAGGTCATCTTCATCAGGCAGCATTAAAGGAAATCATCTTTCACAGATGT-TTGTTTCCATAGCAGACTAGAGAGGAGCCATCAGAATGTTACTGTGATTTTGTTACCTTTGGGGAGCTTTTATTATTTAGCTGTCATCATTAAAAATTGAAAGCTGTGGATTGGCAAGGCAAGATTAAACAGAGTTTCTACCC ..x.::.x:.::..:..:.x:......x..-:.:..:.:.x..:....-::x..:......xx..:........::xx.x.:....x..x....x:x:..--...::..:...:.:.x.x....:.........-:...:....:.xx:.....:....-.x..x:...xxx......:..xx....:..........-....:......x.............:........x.....xxx....::.x:.:...--:.:.x:..x:x...:.:... 30M1D17M1I51M2I32M1D24M1I38M1I57M2I20M 186/269 69.1% 276/94230402 0.0% 9/269 3.3% 141583118 48631437 +3197 chr4 + 190214555 167388451 167388450 167388499 49 TATATATATCTCATAGATATATATATCATAGATATATATATCATAGATA chr4 + 94230402 78811865 78811864 78811913 78811865 78811864 78811913 49 TGTATATATCTCTTATGTATATATATGATAGATATATATATCTTATATA .:..........x..x:.........x...............x..x... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 88576586 NA +3066 chr4 + 190214555 167388896 167388895 167388965 70 AACAAAACAAAACAAAACAAAACAAAACAAAACAGAATAGATGCACTCTAGTTTCCACAGGGAAAGGAGG chr4 + 94230402 15772471 15772470 15772540 15772471 15772470 15772540 70 AACAAAAAGAGGAGAAAAAAAACAAAACAAAACAGAATTGGTGTACTGAATTCATTCCAAGGAGAGGTGG .......x:.::x:...x....................x.:..:...xx.x.:x::x..:...:...x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 151616425 38598130 +15523 chr4 + 190214555 167428192 167428191 167428625 434 GCCTGAAAGCAGGTTTT-GCTCCTGCTTTCTCAATAGACTCACAATCCCTTGGGACCATTTCCCTCTCAGTGAGCTACATCTCAATCAGTAGACAATTCACCGAGGAGACTCAGTTTGAATTCTTGCTTCATCTAGTCACACTCAATTGAACATAGAGGCCTGTGATCATTAAAGGCCGCCACTTTCTCCTGACAGTTTCATGGAAGCGATCCAGAG-CTACTCAGTCCCTGAATTTCATATTCCCTTGAAATTGGAGCTGCACAGTGTAGAGCGGTGTGACCTTTTCCTGTAGGCATTTTTCCTCT-----CTGCAGATTTAAAGGTATATATGCACATTAGAGAAATTTCACAAAGGACAATCACATAATA--AAATGTGATAGGAAAGGTCATAATATACACCAGATAGTAATTTAATTCAGATAAGGAACTCTGCTGTA chr4 + 94230402 25821664 25821663 25822099 25821664 25821663 25822099 436 GCCTCAGATCAGGTTTTTGCACTTACCTTTTCAATAGAAATTTGTCCTCCAGGAACCATTTTGTTCTCATTGTGCTACATCTCAATCAGCAGCCAGTTTGCTGAGGAGACTCAGTTTGAATTCCTGCTTCATCTAGTCACACTCAATTGAACATAGACACCGGTGATCATTCAAGGCCACAACTTTCTTCAGACAGTTCTGTGGAAAAAGTCCAAAACCCACTCAATATCTGACTTTCCTATTTCCCTGATATCAGAGGTGTGTACAGTGCAGTGAGATGACCTCCTCTT------ACTTTCCCTATTATACCCTCACATTTTAATCTTCTCAAACTCAGCAAAAATAACCTGTAATATACGA-CACAGCATAATAAATGCAATAACAAAGGTTAGAACAAAGACTGGATACTCACAGAAAGTAGATACAGACCAGTTCTGTA ....x.:.x........-..x.:.:.:..:........xx:x::x:.:.:x..:.......:x:.....x..x................:..x..:..::.:.....................:.................................x:..x.........x......:.x.......:.x.......:::.....:x::....:.:-.:.....:.x:....x....x....:..:...x..::...x..:::.xx..:x..:.:x:......::..:.------.:...:...x.-----.:x..x....x..xx.x:x:.x:.x..x:.:.:.x.x:::::..x:x..:.-....xx...--.....::...:x......:.x..:.x.x..::....x.x.:xx..xx:.....x:..x.xx.x..... 17M1I199M1I72M6D11M5I51M1D9M2I68M 294/427 68.9% 436/94230402 0.0% 16/427 3.7% 141606528 48608027 +3012 chr4 + 190214555 167451694 167451693 167451736 43 ATCATATATTCATATATTCATATATATATACACACACATATAT chr4 + 94230402 79864489 79864488 79864531 79864489 79864488 79864531 43 ATCATATATTCATATATTCATGTATTCATGTACATACACATAT .....................:...x:..::...:...:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 87587205 NA +16004 chr4 + 190214555 167469298 167469297 167469735 438 GTTTAAATAAAAACATTACAAGTA-CAGAATGATGGAAGAAATACGTTGTTTTTCTT--------GATTAAGAACATCTACAGTCTTTCATAGAATACCCACAGGAAGCTCAGAAACAT----------AATGGGAAAAGTGCAAAATCTATTGAATGCTTTATTGGCTCAGTTATTCTCTGAATCACAGTAGATATAAATACTCTCCTTGGCCTTAGGGCTGCCTTCAAAAATGCTTGTCTATATCAACTTAGATTGCAAAATAAATAAATAAGTAAAGTGTCAGGAACTGTGTTAAACTACTGCAGGCAGAGATTGAAAAATGGTGCAATAA-TATTCTAAGAAGTTGAC-CAAGATCAGAGCTGTTAAGAGGGAGTGACAGGTGGTGTATGCATCCCCAGGCCCTGACTCACTAAATTCTAAATGGCACTTACTCTACCTAGACTAATAATCACAG chr4 + 94230402 25830595 25830594 25831034 25830595 25830594 25831034 440 GCTTAAAGCAGAATCTCATAGGTAATAGATCTGAATAAGAAATATAGTATTTTCTTTTCATGGGAAAATGAAAGCAACTAC--TCTTCCACAGAACACCCACAGAATCAGCTGAAATATTAATGAGCTAAAGGGAATACATACCAGAGCCTTTGCCTGTTTTATTGGCTCTGCTTTTCCATGAATGGCAGATGATATAAATATTATTGTTAGCCTTGGGGCTCTCTTCAAAAATGCTTGTCTGTATCAACTCATATTGTGAA--------------AAAGTGTCAGTAGCTGTGTTAAACCACTGCAGGCTGAAACTGAAAAATGGCACAATAATTTTTCCAACCAGTGCATGCAAGATCAAAGCTGTTAAGAGGGGATGACAGGTGGTAGAAATGTTCCAAGGCCCTGACTCACTAGAGGCGTAACAGCATCCATTTTA---AGTCTAATAAAAATAG .:.....xx.:..:x.:.:.:...-:...x:x:x:x........::x.:....::..--------:.x.:.:.:..x....--....:..:....:........:.xxxx.x....:..----------..x..:.x.x:.:.x.:.x.:x...xx..:...........x.:.x...:x.....x:...xx..........:.x.:x..:.....:.....x:..................:........:.x....::..--------------..........x.:...........:.........x..:.:..........::......-.x...:..xx...xx.:-........:..............::...........:x.x:::.:..x................:.xx.xx..::...:::.:.:..---..x.......xx.:.. 24M1I32M8I16M2D36M10I133M14D58M1I17M1I87M3D16M 302/419 72.1% 440/94230402 0.0% 40/419 9.5% 141638703 48575852 +9045 chr4 + 190214555 167477466 167477465 167477747 282 ATATGCAATCTCCCTACAGTTGATACAGAGACTATGCAAAATTGATTCAGAGGAACCTCATTATGAACTGAGCACTATTATCAAATGTGTCTTGAGAGTATTTTTCCTGGCAGCATCTGATGCTTTTGAAAACTTAATAGATTTAATATGGCATCCTCTTCT-------ATTAGTATCATTCACATTTTGAGAAATTAATTTTCTTATGTTGCCTCTCACAGATGAGTTATGAAGTAATGATGAGTTATGTAGTGATAAATTCAAAGGCAGATATTTGAGAGGATAAAA chr4 + 94230402 25836511 25836510 25836780 25836511 25836510 25836780 270 ATATAGATGCTTTTTTCAGCTTATGAGGAGACCGTACAAAATTGATTGTGAGGAACTTCATCATGCACTGAATGCTATT---------GCCTCTGGAGCCTTTTTAAAATCGGTGTCCAATGCTTTTGCAGACTTAATAGATTTAATATGGTCTCCCCTTCCCTGACGAATTTGCATCTTTGAAATTTCATGCAATTAAATTTCACCCAATTTCTTACAC----------TTAAATAGTGATGAGTTATGAAATGCAGAATTGAGAGGCATGGATTTAAAAGAAAAAAA ....:x.xx..:::.x...:.x..:x:.....::.:...........xx.......:....:...x.....:::.....---------.:..:x:...:x.....xxx:x.:.::..::.........x.:....................:x...:....:-------...x.:...x..x.x....::x.x......x....x:x::x.x:..:x...----------.x..:..:............x.:..xx:....x.:.....x:x....:.:..:.x.... 79M9D74M7I51M10D59M 180/263 68.4% 270/94230402 0.0% 26/263 9.9% 141640955 48573600 +3044 chr4 + 190214555 167508178 167508177 167508251 74 ATCAAATCCTTTTCATGCTTCAGATTTCTGAGTTATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 + 94230402 81894483 81894482 81894556 81894483 81894482 81894556 74 ATAAGTTTCCATTCATGCTTCCCACTACTGTATTTTGTGGTTTTTTTTTTCTTTTTTCTTTTGTTTTTGAGCTG ..x.:x.:.:x..........xx.:.x...x:..x.xxxx..........:......:....x........x.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 85613695 NA +15208 chr4 + 190214555 167515339 167515338 167515956 618 CTTTCCTCTCTCTCTCTTATGACCCCTTTATTTGCCAAATCTTCACAAGGC--------TATGAATTATTGTGACTGCCTTATCCAAAAT----AATACATTCAGTTTATCTGGTAAAAGCAGATGCTAAAGATAGATTCAGTAATTATCACATAAAATGGAGCTATACATATGTATGACTTTATCAGGTAATACCAGGTACTGAATATTTATCCCTCAAGCCACAATGGCTTCATATTATAAATTTATGATTTCTTGGTATCCACTATACAGAATGCTTCTAGCA--TTCAAATGGGCAAATCCTGCCTCTCTCTTTTTTTGAGGGTTATAGTGAATATTTAAATATATATGTGTTGGTACATATATGTTTATATCTACGCTTATGTTACTTTTGGTCTGTAAACTACAATTACTCAG---AGGTTGATGATCGTGTATGAGAAAAAGAAAGGAAGCAAAAGGCTCTCTAAAACTATATAAAATTTAAGATGTTCCTTCCAAAG-AATCATTTGTGTCTGGAGGTTAACAAACAGGCAAAATAAAATCTGAATAGAGGCACATAGCACCTCTACATAAAATAAGAATGCTTGGCA-GTGACCTTGAGGCATAGCATTTTAAATATGTCATGCATTT chr4 + 94230402 25847356 25847355 25847942 25847356 25847355 25847942 587 CTTTCCTGCCTC-CTCTT-TGACAGCTTTGTTT--TACATCTTCCCGTTGCCCGTGGCTTAAGAATTATTGCTTTTCTCatatttaaaattaataaaaaaGTTAGTTTATCAGGTAAAAGCAGATGCTAAAACTAGATTCTCCAATTATCACATAAAATATATCCATACATATGCATGACTTTATCAGGTAGTAACAGGTTCTGAATATTTATCCCTCCAGCCACAATGGCTACACATTACAAATGTATTACTCTTCAGTATGTACTATGCAGCCTCCTCCCAGTAGTCTCAAATGGCCACATATCACCTATCTC---TGCTGGGGATGGGATTGGTTTTT--------------------------CTTTTTTCTTTTCTTTTGCTTCATTTTCACTGCCTTCACCACAACTAATCATGCCAGTGTGGTGTCC---TCCAAAAAATACACATGTATTAATACCCACTC--------------ATTTCCAATTTTGCTGTCAAAGAAAGTGCGTGTGTCAGGAGGTCAATAAACACACAAATTAGAAGTATTAAATAGACAAGTGAGGCTTCCGAATCAAATAGAGACACTTCCCAGGTCACCTTCAGATATAGTACTTTAAGCACCTCATAAATTT .......x:...-.....-....xx....:...--:.x......x.:xx..--------..x.........:xx:.x:.x...::.....----..x.x.x.:........x...................:x.......xx:................:x.x.:.........:................:..x.....x.................x.............x..:....:....x...x.:.::.::....x:.....:...xx.x..:.:..:.--:........x..x..x:::...x....---.x:..:..:.x:x.x..:x.x..--------------------------:x...x.x.:.x.x:..::x.:.:...::x.x:x.xx..:....:..x...x---..xx..:..x:.---.x::.:...x.x.x.x.x.x:..x.xx.x...--------------....xx:..x..x..x:.....-..x:::x......x......:..:.....x:....x..:..x:xxx.x.x..:..x:.::x:.:..::x..x.....:::.::...xx..-..x.....x..::....:.:.....::.:x....:x.... 12M1D5M1D14M2D16M8I31M4I192M2I27M3D23M26D52M3I12M3D32M14D22M1I90M1I40M 388/568 68.3% 587/94230402 0.0% 69/568 12.1% 141667983 48546572 +3676 chr4 + 190214555 167518042 167518041 167518125 84 ACATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCCTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::........:.--....:.:...........::........x.xx.x...x.:.:......::.:..x:xx:..:..:.. 15M2D67M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 91484846 NA +3378 chr4 + 190214555 167518183 167518182 167518228 46 CAAAAAAACAAAAAACAAAACAACAACAACAACAAAACTAAAACAC chr4 + 94230402 78781386 78781385 78781431 78781386 78781385 78781431 46 CAACAGAGCAAAAAACAAAGCAACAACAACAGCAAAACAAAAACAC ...x.:.:...........:...........:......x....... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 88736797 NA +3039 chr4 + 190214555 167540866 167540865 167540939 74 TTTCTTCAGTTTTTTTTTTTGTTTTTTTTTTCTTTTTCATTCTCTGGTGTTTTGTTTTTTTTTTCTGTTCCTCA chr4 + 94230402 9621650 9621649 9621723 9621650 9621649 9621723 74 TTTTTTTGGCTTTTTTTCTTGGCTTTTTTTTTTCTTCCTATCTCTGGGATTTTGTGGACAACTGCTGTTCTCCA ...:..::.:.......:...x:........:.:..:.xx.......x:......xxx:xx:.x......::.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 157919216 32295339 +13345 chr4 + 190214555 167543121 167543120 167543739 619 AGTATTTTAAACAGAAAAAAATAACAAATTTATTGCATTAAAAAT--CACTCTAAAAAGTTA-----ATACCTTTATTCCTGCTATCAGGAGCAGAAAGAATGAATATGTATGGCTAGGCACTATTGAATACCCTG-TTTAAATGAATGTAGCAAATCATTTAAATGCTCCAGGGTTTTCTTTTTC-TTACCAAAAATCATCTAGGTACATAGGCAATTTAATTATGTCAGCTCAAGCAGTGTGCATTTTTATATCATAAAAAGAATAATTTAGAGTGTATA-TTTTTATAAAATCACCTTTTTATTTTTAGGGAAA-------GCAACATGACAGTATGATTTTAGACTCTTCTGTTCAAACTTGCTCTAAGTTGGTTAGATAGTAAAATATTACCTACATGATTAACACAAAACCTATAGGATTGTATTAGT-----------CACCATGTATCAAAAAATAAAAGAAATGTAAAATTATT-TATGCAAACAGAATAATGAAATACTGAACA------CATACACCAATAAGATCTTGTTAAGATCCCAGTGGGCGCAGAATTGAAAT---ACAGACTTTAACAGAA-ATGTATTACTTCCTACAAAATGTGTTTTTAAAATATTTTCCTAAGAAAGCCTCCTTGGGAAAGATCTT chr4 + 94230402 25854467 25854466 25855100 25854467 25854466 25855100 634 AGCACTTAAATCAGAGAAA--TAACAAACCT---GTATCAAAACTGCCAGCCTAGAAAGCTATGGCACTGTTTCCATTCTGTTTACAGTGCATAGGAAGACCAAAT--GCCTCAATAGATAGCACTGAATTCCACGCTTTAAATGAAAACAGCAAATTATCTAAGCACTCTAGGGTTTCCCTTTTCATTATTAAAAAGT---CAGATACGTAGGCAATTTAATTATGTCTGTAAATGCAGTGCGCATTTCCATG-CACAAAAAGAATAATTTAGACCATATATTTTTTAACAAATCACTTCCTCATTGTTTCAAAAATGTTTCTGAATGCTAAAAGTA--AGCCCATATTATTCTACTCAAGTTT-CTTTAAGCTGATTAGATGGTCAAATATTACCTACTTAAATGAGATAATGACTGTGAGATTAAGCTAAGGCAAGGCAATATACTATAGATGAGAAAGC-AAAGGGTTGTGAGATGATTGCATGTTACCAGGGCAATAAAATCATGAGGAAAGAACTATGTACCACTAGAGGTTTG--------CCAGTGGGAGTGAAAGTTAAATTTGAGATGATTTAATGAAATATTTATTACTGACTGCAAGATATGGCTTTTGCAT-TACGCCAAATGAGGCTCCCTTGAAAGGTATATT ..:.:..x..x....:...--.......::.---.:..:....x.--..x:...:....:..-----x.:::.::....:xx:..:x:x.x::..:....x::...--.:x.x:x...::.x:.:.....x..x:.-..........x::.......:..:...:::...:.......:.:.....-...::.....x:---:..:...:...................x.:xx.x......:......::..:-..:.................x::....-......xx.......:.::.:...x..xx::...-------.x.xxx.:.x....--.x:::.x.:.x....::....::..-..:....:..:......:..x.............x.:.x.:.x.:..x:x..:.::....:x::..:x-----------:..:..:x..x.:...::-....::x...:.:..x...-:...:x.x...:::...:....xx...:x.------:..::....x..:::x:...--------........x.:::..x.x....---.x.x:x.....:::..-..x.......xx..:...:..:..x:...x:x..-.x:x..x..x:.:..::.....::.::x..x.. 19M2D10M3D11M2I15M5I39M2D28M1I49M1I12M3D52M1D27M1I34M7I14M2D25M1D68M11I18M1D19M1I30M6I20M8D22M3I16M1I34M1D33M 391/595 65.7% 634/94230402 0.0% 63/595 10.6% 141688654 48525901 +3139 chr4 + 190214555 167571461 167571460 167571500 40 CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x.x.............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 92323412 NA +3353 chr4 + 190214555 167571463 167571462 167571502 40 CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...................x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 92323414 NA +3567 chr4 + 190214555 167571465 167571464 167571504 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 92323416 NA +3102 chr4 + 190214555 167571467 167571466 167571502 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 154970163 35244392 +3353 chr4 + 190214555 167571467 167571466 167571506 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 92323418 NA +3139 chr4 + 190214555 167571469 167571468 167571508 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 92323420 NA +3316 chr4 + 190214555 167571469 167571468 167571504 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 154970165 35244390 +3102 chr4 + 190214555 167571471 167571470 167571506 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 154970167 35244388 +3382 chr4 + 190214555 167586572 167586571 167586653 82 ACAGTGGCATGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGTTGCAGGATCGCTTGAGCCTGGGAGATGAAGGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......--.....x....:.:.........:.::........x::xxx.:.x.:.....:..::.:..x.xx:.....:.. 7M2D73M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 91553374 NA +3023 chr4 + 190214555 167604187 167604186 167604239 53 ATATATATGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857610 6857609 6857662 6857610 6857609 6857662 53 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA .......:..::...::...:x:.........x...........x..x.x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 160746577 29467978 +3191 chr4 + 190214555 167604188 167604187 167604251 64 TATATATGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAGTAG chr4 + 94230402 27325504 27325503 27325567 27325504 27325503 27325567 64 TATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACAGCAG ....:.:x..x.:x..x..:...........:.........::..::......:x.x.:..:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 140278684 49935871 +3195 chr4 + 190214555 167627392 167627391 167627509 118 ATATTTTAACAATTATAAACTAGTTTAAACACAAAATAAATGGAAGATGGGAATTATATATAAGTTTATATATATATATATTTGTTTATATTACATATATAAATATAATTTGTTTGTT chr4 + 94230402 85548395 85548394 85548500 85548395 85548394 85548500 106 ACATCTGGACAATCAAAAGCTC-TTCAAAAAAAAAAAAA-----------GAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCATTTTAGTTGTT .:..:.x:.....:.x..:..x-..:...x.x....x..-----------..:......:..x..x.:.::...:......x.:.......:.x.:..:x.x..x:.x...:x..... 22M1D16M11D68M 73/106 68.9% 106/94230402 0.0% 12/106 11.3% 82078997 NA +8774 chr4 + 190214555 167629414 167629413 167629634 221 ATATTTTCTCAGACTTTCATATTTATTTGCTTGTCATGATTGTTTTGATATTCAGCTGACAAACTATGCCAAATGACTGACATGAGCAAATGCCAGGGAATATCAGGAGTGAAATAAGACAACAATTGAGTATATTATCATTTT-AATGGTCTGTCTCACCCTGCTGAGGGTTGTGATTTTGTTCTGTTCCTAACTGTCATGCTTGATTAACTAGATCCTGC chr4 + 94230402 25890540 25890539 25890750 25890540 25890539 25890750 211 ACATTTGCTCAGATTCTCATATTTATGTGCCAGTTGTATTTGTTTTGACACCCAGCTGACAATCTGCATAGAATAACTGGCACAGGCAAGCGCTGAGGAGCATCAGGGCTGAGAT--GACGACA---GACTGCATTACCATCTTAAACGGTCTGT------CTGCTGAGTGCTGTGATTTCCTTCCTCCCTTACCTGCCACACTTCATTACCCAGCTCCCAC .:....x......:.:..........x...:x..::.:x.........:.::..........x..::::x:...:....:..:::....::..:::...::......:x...:..--...:...---..x.::....:...:..-..:.......------........x.:........:x...:x::.:..x...:..::...x....x.:..x...::. 115M2D7M3D17M1I10M6D61M 148/210 70.5% 211/94230402 0.0% 12/210 5.7% 141738874 48475681 +3234 chr4 + 190214555 167640245 167640244 167640340 96 TTTTATGACTGGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCT--CTATATATATATATATATA---TTTATATAAAACATAGGATGTATATTTTGGTATTA chr4 + 94230402 4618343 4618342 4618443 4618343 4618342 4618443 101 TTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATA ....x.xx..x....::.x.......::..............--....::......x.x....---.x..x...x.x:...x:x.:...:..x.:x..x.. 42M2I19M3I35M 69/96 71.9% 101/94230402 0.0% 5/96 5.2% 163021902 27192653 +3244 chr4 + 190214555 167640247 167640246 167640347 101 TTATGACTGGTGCTCTCTCT----------CTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATTTATATAAAACATAGGATGTATATTTTG-GTATTACTGGTAA chr4 + 94230402 4618333 4618332 4618444 4618333 4618332 4618444 112 TTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATATTATATGTTGTACTAATAA ..:..:...x.x:...:...----------......::..............::x...::......x.x.x....xx.x.x...x:x.:......x.:-..xx....::... 20M10I68M1I13M 71/101 70.3% 112/94230402 0.0% 11/101 10.9% 163021914 27192641 +3564 chr4 + 190214555 167642662 167642661 167642743 82 GTGGTGCCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCCCTTGAACTCAGGAGGCAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----:.x......:...........::........x.xx.x...x.x.......:...:..x:xx:..:..... 7M5D70M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 91609461 NA +3123 chr4 + 190214555 167663627 167663626 167663745 119 CAATCAGATTTCAG-----AACATATATGTGTGTATATATGTCAATATATGTATATATATT--------ATATATGTGTACATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATTGCTACT chr4 + 94230402 6857543 6857542 6857672 6857543 6857542 6857672 130 CAGTCAGACTTCAGGTGGCAAAGTATTTATG-GTATAAGTATCTGT-TCTGGGCATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCT ..:.....:.....-----..x:...x.:..-.....x:.:..x:.-.x..x::...xx.:--------......::......::....:x:.........x...........x..x:x:...x..x:.x.. 14M5I12M1D14M1D14M8I63M 82/117 70.1% 130/94230402 0.0% 15/117 12.8% 160806084 29408471 +3059 chr4 + 190214555 167667653 167667652 167667713 61 TATATATGTGTGTGTATATATATATGCATGCACAT--ATGTGCATGTGTGTATATATATATAT chr4 + 94230402 76709592 76709591 76709654 76709592 76709591 76709654 63 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT .......:..::...:.x....:.x....x.....--.....:..x.....x.......x.:. 35M2I26M 48/61 78.7% 63/94230402 0.0% 2/61 3.3% 90958061 NA +3606 chr4 + 190214555 167667673 167667672 167667728 56 TATATGCATGCACATATGTGCATGTGTGTATATATATATATATGTGTGTGTGTGTA chr4 + 94230402 92759686 92759685 92759741 92759686 92759685 92759741 56 TACATTGGTGCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGTA ..:..xx:.......x...........xx.x..........:.............. 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 74907987 NA +3058 chr4 + 190214555 167667697 167667696 167667753 57 TGTGTATATATATATATATGTGTGTGTGTGTATGTGTATATATGTATGTATAAGTTG chr4 + 94230402 55694454 55694453 55694510 55694454 55694453 55694510 57 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATATTG ...:.::...:...:.:........:.......x:x:..:..:..:......x:... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 111973243 78241312 +3243 chr4 + 190214555 167675294 167675293 167675381 88 GTGGTGGGCACCTGTGGTTCCAGCAACTTGGGAGGCTGAGGTGAGAGGATCACTTGAGCTTGTGAGGTCCAGGCTGCAGTGCGCCATG chr4 + 94230402 76033201 76033200 76033286 76033201 76033200 76033286 86 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ......--...x...:........x.....::........x:xx.x.:.x.......:.:::x:..x.:::.....:..x:.::x... 6M2D80M 58/86 67.4% 86/94230402 0.0% 2/86 2.3% 91642093 NA +6970 chr4 + 190214555 167711154 167711153 167711785 632 AGAAATCAGACTTAAGAAGTGTGAATAAAGTAGGAAGATCATTCTTCCCTGATTTTCAGTCTCTTTTCCAGCAGTATTTACCAAGAGGACTGTGAAAGTATGCGTCCTGCGAGCCCACACGGATGTAACAAATAAGAAACCAGGTGAATACATA------GCCAAG--------AAAGCAAGTGATTTAAAATAAT-------------ATTCATCATCTA---ATGTCAAGTGAAGCCATTGGGAAAACTTAAACATTTTTAACACTTTAGAATCTTTACCAAATCTCACCACTGAGTCCCAGTTTGCTCAGCTAATGAATGTTTTTGTGCCCTCAGTGTGGAAAGTGTATAAAGCCCTCTGTTGTCTCTCATTAAAATATCTATAAAATGTACTGCAGATGCCCCTGAAATGAGGCTCA-TTTAACTGATCCTTTTATAAGATTTATGACATCAGAGTCACATACCCAATTCCAGCTGGTTAAGGAAGTTTTATAGAAGCAGAACTAGAAGAAAATGGA-----ACTGAGACGTGGCTATAAATACGGTGTGCAGCGACAAGTCTTTC-AGAGTGTTTATTAAATGAAAAATGGTTTTTTCACCCTGACTGCTGTATTTCATCAGAGGCCCCTGAGCTCTCTGTCAATACCCTTTCACACATATAAT chr4 + 94230402 25912702 25912701 25913297 25912702 25912701 25913297 596 AAAAATAACACACAAAAAACA-GCATGAATCTGGAAAATCCTTCTAACGTGTTTTTT--TTTTTTTTCCATT---------CAGAAACCCTCTAAAAATTTACCCACTGAAA------AATATTTTAGTAAACAGGGGGCAAAGTAATTGCAGATTTCTTGCAAAGCAGAATTTAAAACAGGTGTTTTAAGAGAACTACAAAGCAAGCGGTTAATGATTCAGAAACGTCACATAATTCTGCCCAGAAAA-TCAAACACTTTCA----TTTAGACTTT---------CGTACCACCCA---TCAGTT-------CTAGAGAATGTTTTA-------CGGTAT------CTCGTAAATTCTTCT------CCTCATTGAAAAGTATTTAAAACATACAAAATGTGCTTCAAGAGAATGTCTTAATTTAACTGA-CCATTTAAAAAAATTATGGCAGCAATGCCAAACGTGAAATTTCCACTGATTAAGAAAGTTTTATGGGGGCATAACTAATGAAAAATGCAAGCATAATAGGGTCTATTCATAAATGCTGTCAGGACTGACAGTCCTTTTAAGACTCCAGGTTAACTGAAGGACGA-TTTTTCATACAGACTAC-ATATTCTAGTCAAGGC---------CTCACTCAATGCCCTTTCACACATATGAT .:....x.x..x:..:..:::-.x..:..x:x....:...x....xx.x..x....:--.:.:.......x:---------..::.:xx..x.:...:.x.:.x:x...x:.------.xx:x.x..::...:.:.:::.x.:..:.x.:..x.------..x...--------...:..:...x.....:.x..:-------------:..x..x..::.---.:....x:.:.xx.::::x:.....-.:.....:...:.----......x.:.---------.x:.....:x.---:.....-------...:x.........x-------.:..:.------:x::....x:.:...------:......:...x:.x.x.....::...x:x.x:...::.x::.:x:x.x..:.-.........-..x....x..:.x.....:..x..:x.:..x.:::xx....:.x:...:.....:.........:.::...x.....:x::......x.-----.x.::.::x.:x::......:.x..xx.x.x:....:x:....:-...x.x:xx:....x....::.:.:-.......:x.x....:.-:....::.x:x:....---------...xx.....:...............:.. 21M1D35M2D13M9D31M6D36M6I6M8I22M13I12M3I25M1D13M4D10M9D11M3D6M7D15M7D6M6D15M6D53M1I9M1D89M5I44M1I25M1D17M1D16M9D29M 355/559 63.5% 596/94230402 0.0% 110/559 19.7% 141798452 48416103 +3211 chr4 + 190214555 167712656 167712655 167712737 82 GAAATACATT--CCTGAGCAATAATTAA-------TCAGTAATAAACAAATTATTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGAG chr4 + 94230402 22359201 22359200 22359291 22359201 22359200 22359291 91 GAAAGACATTAGCTCAAGAAGTAATCAAAAGTCTTTGGAAAAGAAACAATATGATTTTACTTTTTTTGTTTGTTTGTTTTTTGAGACAGAG ....x.....--.:::..x.:....:..-------.x::x..x......xx.:x....xx...x........................... 10M2I16M7I56M 63/82 76.8% 91/94230402 0.0% 9/82 11.0% 145353455 44861100 +10766 chr4 + 190214555 167717471 167717470 167717792 322 TATTATGAAGCACAAGGTATTACATGAGTAATGAACATTTCTCCTGCAGAAATTAGAGAGCATCCACAGACACCTTGTGGGCCATCATTAAATCAAAGGAAGGGACCCTCTGTGAAATGAGCACTGGCTGTGCATTGACAGCC-TATGATCCCCTTAACCTGTCAGCTTTCATTACTCTACAGAAGATGAAAAATTACTTTGAATGGCAAGATGAGTGTGGCGATATTGTGTTTGTGGATTCACGCATTCCAGAAATTGAAACTGATATTTTCCTCTGCACAGTGCTGAACAGAGAGCATCATTGTTCACCTTTGGTCCATCC chr4 + 94230402 25917779 25917778 25918090 25917779 25917778 25918090 312 TATTATGAGCTGCAATATATAGTAAAAATAAACCTTATCTTTTACACAGAAATCAGAGGATATCAATAGCTTTCCTCTGCATGATAATTAAGTCAAAGGAGAAGTCC-----TCAAAAAGGCAAATGCTGCAT-CTGTCAGACATATGATTCCCTT-----GTCTCTTTTCATTACTTTGCTGAGGATGAAAAACTACTTTGAATGGCAAGACGGATACAGTGATACAGTGCTTGTGAATGCTCATAGTTAAGAAATTGAAGCTGACATTTTATTCTGCACTATGCTAACCATAAAACATTATTGTTTATCCTAACTTCATTC ........:x::...x:...x::.x:.:...xxxx:..:.:.:x::.......:....:::...x.:..x:x:.:.x..x::x..x.....:........:::.x..-----.x...x::...xxx....:::-:..x...x.-......:.....-----...xx:..........:.:.x..:.........:.................:.::.:::.:....:x...:.....:..x.x.::.x.:x..........:....:.....x:.......x:....:.x..x.:.:...:......:.:.:.x:x.:...:. 107M5D21M1D9M1I12M5D162M 206/311 66.2% 312/94230402 0.0% 12/311 3.9% 141799692 48414863 +3890 chr4 + 190214555 167718618 167718617 167718692 75 TATGTGTGGCCCAAGACAATTCTTCTTCTTCCCATGTGACCCAGAGAAGCCAAAAGATTGGACACCCA--TGCTTTA chr4 + 94230402 43915637 43915636 43915713 43915637 43915636 43915713 77 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATGTGCTTTA ...:.....:......:....::.:...x::xx.....x......x...x......x.....::....--....... 68M2I7M 58/75 77.3% 77/94230402 0.0% 2/75 2.7% 123802981 66411574 +3292 chr4 + 190214555 167728485 167728484 167728544 60 TGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTTGAAAGAGGTAGAGGGCAGAA chr4 + 94230402 87420509 87420508 87420568 87420509 87420508 87420568 60 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAA .:...........:.:........:.x.x.x.....:.:...:....:x...xx...:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 80307976 NA +5241 chr4 + 190214555 167742065 167742064 167742219 155 TACATTTATTCTAGGTTTGTGAATTCGAGAAACCAGTATGAAACCATTTGCATGATTAAATGTTTTGAAAAGTTCTATTCCTAAGATTTGTTTTAGCCATGACCATGAGAAGAAATAA---------------CATCTAGATCTAACCATAACAGACCCCATATTGGGTC chr4 + 94230402 35775930 35775929 35776094 35775930 35775929 35776094 165 TACCTCCATGACGAGTTGGTGAGCGCGGGAGACCAGTGTAAGACCGTTGGCATGATTAAATGTTTCAGAAATGTCTTGCCCAAACG-----TGTAGCCGGCACCACGTGGAGATATACCCCAGCCGCCACGATCATCTGGATCCGACCATAACAGATCACACATTGGACC ...x.::..xx:::...x....::x..:..:......:.:.:...:..x................:::...xx...xx:..x..x:-----.x.....:xx....:.x.:...x...x---------------.....:....::...........:.x..:.....::. 86M5D27M15I37M 103/150 68.7% 165/94230402 0.0% 20/150 13.3% 131966135 58248420 +3060 chr4 + 190214555 167743873 167743872 167743994 122 ATGTGTATATATTTATATATAATAATGGGAACATATTTTAATATAAAAAATTTAAATATAAGCAATTTGCTGTTTCCTCAAGGATCATCGTGTATAAAAATGGAAGGCACAAAAAGTTTGTT chr4 + 94230402 49142781 49142780 49142893 49142781 49142780 49142893 113 ACGTATATATATACATATATAAAGATGTGAATATATTTCAGGGGAAAAAATAAAGCTTGAAACAATTTCATTTGTATTTAAG---------GTTTAAGAATAAGAGCTGAGAAACTTTTATT .:..:.......x:........x:...x...:......:.:x:x.......xx.:x.xx..:......xx.x.x.x:.:...---------..x...:...:::..x::x:...xx...:.. 82M9D31M 73/113 64.6% 113/94230402 0.0% 9/113 8.0% 118601092 71613463 +3535 chr4 + 190214555 167778139 167778138 167778277 139 TTCTGTTCCAT-TGGTCTCTCTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATA-TATATATATATATACACAT-----------------ATATATATATATATATGTGTATATATATGTTTTG chr4 + 94230402 4618321 4618320 4618477 4618321 4618320 4618477 157 TTTTGCCCTATATTGTGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATATTATATGTTGTACTAATAATACGGAGATAGATAAGGATTTATCTATGCTTCG ..:..::.:..-.x..xx..x.:.x...x...:x:x.::.x.......::..............x:..x.x:......x.x......-....x......-..:.:..-----------------...::x.x...x...x.x:.x...x....:..:. 11M1I75M1I11M1D7M17I34M 96/138 69.6% 157/94230402 0.0% 20/138 14.5% 163159818 27054737 +4111 chr4 + 190214555 167778160 167778159 167778257 98 CTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATACACATATATATATATATAT chr4 + 94230402 4618339 4618338 4618433 4618339 4618338 4618433 95 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT---TATATAT-TATATGT ....:.x...:...:x:x.::.x.......::..............x:....::......x.x......-....x.....:---.......-.....:. 69M1I11M3D7M1D7M 73/94 77.7% 95/94230402 0.0% 5/94 5.3% 163159821 27054734 +4300 chr4 + 190214555 167778161 167778160 167778261 101 TGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATATATGT chr4 + 94230402 4618336 4618335 4618433 4618336 4618335 4618433 98 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATAT-TATATAT-TATATGT ..x....:.:...:...:x:x.::.x.......::..............::x...::......x.x......-:....x.:....-.......-....... 72M1D12M1D7M1D7M 75/98 76.5% 98/94230402 0.0% 3/98 3.1% 163159825 27054730 +3306 chr4 + 190214555 167778167 167778166 167778240 74 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATACA chr4 + 94230402 4618344 4618343 4618418 4618344 4618343 4618418 75 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATA .:...:...:x:x.::.x.......::..............x:x...::......x.x......-....x...:. 64M1I10M 54/74 73.0% 75/94230402 0.0% 1/74 1.4% 163159823 27054732 +3423 chr4 + 190214555 167778169 167778168 167778287 119 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATATATGTGTATATATATGTTTTGGTACAAGTAC chr4 + 94230402 4618342 4618341 4618447 4618342 4618341 4618447 106 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATAT-----AGTATAGATATAT-TATATAT-------TATATGTTGTACTAATAATAC .:.:...:...:x:x.::.x.......::............x.::x...::......x.x.....-----x::...x......-.......-------........x.:x..xx.:... 65M5D13M1D7M7D21M 76/106 71.7% 106/94230402 0.0% 13/106 12.3% 163159827 27054728 +3473 chr4 + 190214555 167778179 167778178 167778267 89 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATA-----TATATATATATGTGTATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.x.x.x...:.:....:.:.:.:::.:.:x.x..x.:....x....-----.:.::::..:......... 70M5I19M 62/89 69.7% 94/94230402 0.0% 5/89 5.6% 106946649 83267906 +3556 chr4 + 190214555 167778181 167778180 167778269 89 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATA-----TATATATATGTGTATATAT chr4 + 94230402 60831530 60831529 60831623 60831530 60831529 60831623 94 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATAT ...x.....x.............x.x.x.....:.:....:.:.:.:::.:.:x.x..x.:.:..x....-----.:.::::......:..... 70M5I19M 62/89 69.7% 94/94230402 0.0% 5/89 5.6% 106946651 83267904 +3688 chr4 + 190214555 167778183 167778182 167778275 93 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATA---TATATGTGTATATATATGTTT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x:.x...:..x.....:---.:.::.::.:.:.:...:... 72M3I21M 63/93 67.7% 96/94230402 0.0% 3/93 3.2% 106946653 83267902 +3599 chr4 + 190214555 167778185 167778184 167778276 92 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATA---TATGTGTATATATATGTTTT chr4 + 94230402 60831530 60831529 60831624 60831530 60831529 60831624 95 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x:x:.x...:..x.....:---.:..:.:..:.:.:.:.x.. 72M3I20M 62/92 67.4% 95/94230402 0.0% 3/92 3.3% 106946655 83267900 +3958 chr4 + 190214555 167778187 167778186 167778273 87 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATATA---TGTGTATATATATGT chr4 + 94230402 60831530 60831529 60831619 60831530 60831529 60831619 90 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGT ...x.....x.............:.:.......:.:....:.:.:.:::.:..x:x..x...:..x.....:---....:::..:.:... 72M3I15M 62/87 71.3% 90/94230402 0.0% 3/87 3.4% 106946657 83267898 +3937 chr4 + 190214555 167778189 167778188 167778273 85 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATATATG---TGTATATATATGT chr4 + 94230402 60831530 60831529 60831617 60831530 60831529 60831617 88 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGT ...x.....x...........x.:.:.......:.:....:.:.:.:::....x.x..x...:..x......---...::::..:... 72M3I13M 62/85 72.9% 88/94230402 0.0% 3/85 3.5% 106946659 83267896 +3500 chr4 + 190214555 167778191 167778190 167778262 72 TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATACACATATATATATATATATATGTG chr4 + 94230402 60831530 60831529 60831601 60831530 60831529 60831601 72 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG ...x.....x.........x.x.:.:.......:.:....:.:.:.::....:x.x..x...:..x...:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 106946661 83267894 +3105 chr4 + 190214555 167787593 167787592 167787688 96 TTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAA-----TTATTTAATTAT-----TTAACAAATAAATTATTTAA chr4 + 94230402 87198560 87198559 87198665 87198560 87198559 87198665 106 TTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATTCATATAA ..x...xx.....x:.....x.:......x:.:.......:...x.:...:..:.:..x.....-----..xx....x.:.-----.:..:.:.:..x.:..x... 64M5I12M5I20M 68/96 70.8% 106/94230402 0.0% 10/96 10.4% 80589033 NA +3633 chr4 + 190214555 167787612 167787611 167787811 200 TTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAA------TTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTAT-TTAATTATTTAACAAATAAATAAATTATTTAATTATTTAACAAATAAATAAATCATTTAATTATTTAACAAATAAATCA chr4 + 94230402 87198555 87198554 87198734 87198555 87198554 87198734 180 TTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATT-----------CATATAAATGATACTAACTA-TCATCAAAGGAGTAA------TAACGCCTTTATTGATGAATAAATC---------TCTAAAAGACAGATCA ..x....x...xx.....x:.....x.:......x:.:.......:...x.:...:..:.:..x.....------..:..x...xxx.:x::x....:.:x...-----------..x......x..-:...:..-.:.x....x:.:...------...:xx:..x.:x:..:........---------.:...x.:.:.:.... 69M6I29M11D12M1I7M1D15M6D25M9D16M 119/173 68.8% 180/94230402 0.0% 34/173 19.7% 80589057 NA +3462 chr4 + 190214555 167787636 167787635 167787835 200 TTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAA------TTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATAAATTAT-TTAATTAT--TTAACAAATAAATAAATCATTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAAATCA chr4 + 94230402 87198555 87198554 87198734 87198555 87198554 87198734 180 TTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATT---------------CATATAAATGATACTAACTATCATCAAAGGAGTAATAACGCCTTTA-----TTGATGAATAAATC---------TCTAAAAGACAGATCA ..x....x...xx.....x:.....x.:......x:.:.......:...x.:...:..:.:..x.....------..:..x...xxx.:x::x....:.:x...---------------:.x......x..-:...:...--.:..x::.xx.....xx.x....-----..:.::........---------.:...x.:.:.:.... 69M6I29M15D12M1I8M2I23M5D14M9D16M 118/171 69.0% 180/94230402 0.0% 38/171 22.2% 80589081 NA +3502 chr4 + 190214555 167787660 167787659 167787764 105 TTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAA------TTATTTAATTATTTAACAAATAAATAAATTATTTAA chr4 + 94230402 87198555 87198554 87198665 87198555 87198554 87198665 111 TTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATTCATATAA ..x....x...xx.....x:.....x.:......x:.:.......:...x.:...:..:.:..x.....------..:..x...xxx.:x::x....:.:..x.:..x... 69M6I36M 72/105 68.6% 111/94230402 0.0% 6/105 5.7% 80589105 NA +3598 chr4 + 190214555 167787684 167787683 167787859 176 TTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATTATTTAATTATTTAACAAATAAATAAA--TTATTTAATTATTTAACAAATAAATAAATCATTTA------ATTATTTAACA----------AATAAATCATTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAAATCA chr4 + 94230402 87198555 87198554 87198734 87198555 87198554 87198734 180 TTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATTCATATAAATGATACTAACTATCATCAAAGGAGTAATAACGCCTTTA-----TTGATGAATAAATC---------TCTAAAAGACAGATCA ..x....x...xx.....x:.....x.:......x:.:.......:...x.:...:..:.:..x.....:.xx--..:..x...xxx.:x::x....:.:..x....x..------.:..x:..x..----------.....xx.x....-----..:.::........---------.:...x.:.:.:.... 73M2I35M6I11M10I13M5D14M9D16M 112/162 69.1% 180/94230402 0.0% 32/162 19.8% 80589129 NA +3414 chr4 + 190214555 167787781 167787780 167787920 140 TAAATCATTTAATTATTTAACAAATAAATCA--TTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAA--ATTATTTATTTAATTATTTAACAAATAAATTATTTATTTAA chr4 + 94230402 87198522 87198521 87198665 87198522 87198521 87198665 144 TGAAACCTTTAAATCTCAAAGAAGTCCTTCAACTTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATTCATATAA .:..x.x.....x.x.:x..x..:.xxx...--..x....x...xx.....x:..:..x.:......x:.:.......::..x.:...:..:.:..x....--.::x...:..x...xxx.:x::x....:.:x...:..x... 31M2I68M2I41M 90/140 64.3% 144/94230402 0.0% 4/140 2.9% 80589259 NA +3136 chr4 + 190214555 167787788 167787787 167787892 105 TTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAAATCATTTAATTATTTAACAAATAAA------TCATTTAATTATTTAACAAATAAATTATTTATTTAA chr4 + 94230402 87198555 87198554 87198665 87198555 87198554 87198665 111 TTGAATTTTTTTCCAAATCGATTATGTGATTATTGGATAAATAAACTATGTGATTGTTCAGCACATAAACACCCTTTGTTAAATGTGTCCGTCAATAGACAATTCATATAA ..x....x...xx.....x:..:..x.:......x:.:.......::..x.:...:..:.:..x.....------.::..x...xxx.:x::x....:.:x...:..x... 69M6I36M 69/105 65.7% 111/94230402 0.0% 6/105 5.7% 80589233 NA +3587 chr4 + 190214555 167793425 167793424 167793485 61 GTGTGCCTGTCGTCCCAGCTACTTGAAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x...x..:.....................x.xx.x...x::...........:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 91760221 NA +3386 chr4 + 190214555 167801704 167801703 167801769 66 ACATCTCAAAAAAAAAAAAA---------AAAAAAGAAAAAAGAAAAAAAGAAACATGGAGACTGAGGCAAGGGA chr4 + 94230402 41136168 41136167 41136242 41136168 41136167 41136242 75 ACACCTCTAAGAAAGACAAACTAACAACCAGGAAAAAAAAAAGAAAAAAAGAAACTTGGAAACAAAAGCAAAGGA ...:...x..:...:.x...---------.::...:...................x....:..x:.:....:... 20M9I46M 52/66 78.8% 75/94230402 0.0% 9/66 13.6% 126665536 63549019 +4378 chr4 + 190214555 167804437 167804436 167804620 184 ACCACCCTGGGCAATATGGTGAGACC------ATTATCTTGAAAGAAAGAAGAGAGAGAGAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAGAAACAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAG chr4 + 94230402 49044625 49044624 49044814 49044625 49044624 49044814 190 ACAACCTTAGGTAATATTGAATTACCTAAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG ..x...:.:..:.....x.x:xx...------....xxxx....::..x......xx::.:.x.:xx.......x.::x..x:....:x.xx:.:x..:.:...:.:..:xx..:....::.:.:.::x:.....x:..::...........x...:..:.:..xx:.:.xx:::....::....:x:.. 26M6I158M 108/184 58.7% 190/94230402 0.0% 6/184 3.3% 118759812 71454743 +3258 chr4 + 190214555 167804471 167804470 167804629 159 GAAAGAAAGAAGAGAGAGAGAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGG-AAGGAAGGAAGGAAAAGA-AAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAGAAACAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAGAACAGAGAG chr4 + 94230402 59372579 59372578 59372733 59372579 59372578 59372733 155 GGAAGGAAAAACACCGAAAGCAA-CGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAA-----AGGAAAATAATAACAGGAAGAAATAACAAAGGG .:...:..:..x.xx..:..x:.-x...x..x:....:..:..x:.x.:x..x..x..::.:..-:...::.....:....:.-..x...::::...:x.:x..x..:.::.x...x..:...-----.::...:x..x:.x..:...:..x....:..:. 23M1D40M1I18M1I39M5D33M 95/153 62.1% 155/94230402 0.0% 8/153 5.2% 108431892 81782663 +3323 chr4 + 190214555 167804488 167804487 167804584 97 GAGAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGA----------AAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAG chr4 + 94230402 11857965 11857964 11858071 11857965 11857964 11858071 107 GAGGGAGGGAGGACTGGATCAGAGGACAAGGTGAAGTGGAAACTTTTAAGAGAGATGTGTAAAGCAAGGAAAAGGAAGAACGGCAAAAGAAAGAAGTAGAGAGAAAG ...:...:..:..xx.:.xx.:..:.x:.::x:...x----------....:...x.x:x:...x.........:.....x.:x...........:x...:...... 37M10I60M 66/97 68.0% 107/94230402 0.0% 10/97 10.3% 155946523 34268032 +3273 chr4 + 190214555 167804501 167804500 167804590 90 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAGAAACAA chr4 + 94230402 52659762 52659761 52659851 52659762 52659761 52659851 90 AAGTTAGAAAGAAAGAATTCAGGAAAAGGAGATGAGCTGTGCAAATTAAAGAAAGAAAGAAAAAAAAAAGCAGAAGGACAATAAATAAAA ...xx............xxx.:....:::...x..:xx:x.x..:xx..................:....x.:...:.x:.x.:.x.x.. 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% 115144739 75069816 +3037 chr4 + 190214555 167804506 167804505 167804575 70 AGAAAGAAAGAAAGAAAGAAAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAA chr4 + 94230402 54037031 54037030 54037100 54037031 54037030 54037100 70 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAA ..:..:..::...:...:...:....x.:.:.xx::.:..x......x...:...:......x::..x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 113767475 76447080 +3772 chr4 + 190214555 167816033 167816032 167816115 83 CACAGTGGCACACACATGTAGTCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCACTTGAACTTGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........::...:--......:.........::::........x.x..x...x.........:::::..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 91782836 NA +3109 chr4 + 190214555 167818197 167818196 167818304 108 TTTTTTAGATTGTATATTTTCAGTATTTTCTAATTATCTCTTTAGTATATGAATATTGGTTTATTTTATATATCTAGCTCATATGATATATTTTTACGTTTGACTAAA chr4 + 94230402 66354473 66354472 66354579 66354473 66354472 66354579 107 TTTTCTAAAATGAATGCCCTT-TTATTTTCTACCTATATCTTTAGCCTGTTTATATTAATTGTTTTCATGTATGTGGTTCATTAAGAATTTTCTGACATATAATTAAA ....:..:.x..x..::::.:-x.........x:...x.......:x.:.xx.....::..xx...:..:...x.:.:....xx::x..x..:.x..:.x.:.:.... 21M1D86M 68/107 63.6% 107/94230402 0.0% 1/107 0.9% 101463724 88750831 +3116 chr4 + 190214555 167828817 167828816 167828868 52 TGTGTGTGTGTGTGTGTGTGTGCATGCATGCACGCATACGTATGC-AATACAT chr4 + 94230402 85834541 85834540 85834593 85834541 85834540 85834593 53 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACAT .....x................:..xx...:.x......:....:-....... 45M1I7M 44/52 84.6% 53/94230402 0.0% 1/52 1.9% 81994276 NA +3286 chr4 + 190214555 167870461 167870460 167870517 57 TATGTATGTGTATATATATGTATGTGTATGTATGTGTATGTGTGTGTATATATATGT chr4 + 94230402 76709598 76709597 76709654 76709598 76709597 76709654 57 TATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ....:......x....:.x.:..x:::............x.....x.......x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 91160863 NA +3541 chr4 + 190214555 167870464 167870463 167870541 78 GTATGTGTATATATATGTATGTGTATGTATGTGTATGTGTGTGTATATATATGTATGTGTATATATATGGGTGTATGT chr4 + 94230402 5214244 5214243 5214321 5214244 5214243 5214321 78 GTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.x..:.:.:.:..x..:.......:..x..:.........:::.x.::...:....:..::.x...x...:.::. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 162656220 27558335 +3085 chr4 + 190214555 167870481 167870480 167870563 83 TATGTGTATGTATGTGTATGTGTGTGTATATATATGTATGTGTATATATATGGGTGTATGTGTGTATACACACACATGTATGT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x...:.x...:.........:.:...xx:.:.:x.:...:.....x:x:..::...x...:......:.:::.::. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 82035948 NA +3823 chr4 + 190214555 167870485 167870484 167870587 103 TGTATGTATGTGTATGTGTGTGTATATATATGTATGTGTATATATATGGGT----GTATGTGTGTATACACACACATGTATGTATATATGTGTGTGTATATATATGT chr4 + 94230402 89812949 89812948 89813054 89812949 89812948 89813054 106 TATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGT .:.....xx....x....-.::....x...x:...........x..x:x.:----:..::....:.x..x.x..:::......x:x.:.........:......... 18M1D32M4I52M 73/102 71.6% 106/94230402 0.0% 5/102 4.9% 78057536 NA +3681 chr4 + 190214555 167870487 167870486 167870562 76 TATGTATGTGTATGTGTGTGTATATATATGTATGTGTATATATATGGGTGTATGTGTGTATACACACACATGTATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .:...x.....:.........:...xx.....x.::..:....:.:::.::....x.:.::.....:...:::... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 82035946 NA +3181 chr4 + 190214555 167870515 167870514 167870631 117 TGTATGTGTATATATATGGGTGTATGTGTGTATACACACACATGTATGTATATATGTGTGTGTATATATATGTATGTGTGTATATATATATATATGGGTGTATGTGTGTGTGTATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.x....::x:..:x.x::.:..x:....:.:.:..x:::.x.::::.:.:..x.::......::..x..:........::::.x.::.:.:..x.::.:::x:......:.:.. 117M 63/117 53.8% 117/94230402 0.0% 0/117 0.0% 162656310 27558245 +3230 chr4 + 190214555 167870522 167870521 167870585 64 GTATATATATGGGTGTATGTGTGTATACACACACATGTATGTATATATGTGTGTGTATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...........x:...:.x.:.::.x:..:x...........:...x.....x.:.....x.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 91160931 NA +3301 chr4 + 190214555 167870523 167870522 167870600 78 TATATATATGGGTGTATGTGTGTATACACACACATGTATGTATATATGTGTGTGTATATATATGTATGTGTGTATATA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-----TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ....:....-----.:......x.....:......:..:::xx....:.x....:..:.....::.x..:....:.:. 9M5D64M 53/73 72.6% 73/94230402 0.0% 5/73 6.8% 111003232 79211323 +3655 chr4 + 190214555 167870533 167870532 167870640 108 GGTGTATGTGTGTATACACACACATGTATGTATATATGTGTGTGTATATATATGTATGTGTGTATATATATATATATGGGTGTATGTGTGTGTGTATATATATGTGTG chr4 + 94230402 5214209 5214208 5214316 5214209 5214208 5214316 108 GGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .....::x::..x::..:..:x.:...:..:::.x:...x..:::.:.:..x.:::...:..:..x.::..:.:.:..x.::x.:.........:..::.x....... 108M 63/108 58.3% 108/94230402 0.0% 0/108 0.0% 162656324 27558231 +3201 chr4 + 190214555 167870554 167870553 167870660 107 ACATGTATGTATATATGTGTGTGTATATATATGTATGTGTGTATATATATATATATGGGTGTATGTGTGTGTGTATATATATGTGTGTGTGTGTATATATATATATA chr4 + 94230402 21109195 21109194 21109301 21109195 21109194 21109301 107 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.::.:...:.x.x....x.:....x........:x::::....:x::.:..:x.:x::......::x::..:x.x.:.:.:.:.....:..x....::..::.:. 107M 61/107 57.0% 107/94230402 0.0% 0/107 0.0% 146761359 43453196 +3009 chr4 + 190214555 167870567 167870566 167870607 41 TATGTGTGTGTATATATATGTATGTGTGTATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .:.....x......:....:................x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 118911892 71302663 +3038 chr4 + 190214555 167870617 167870616 167870668 52 TGTGTGTGTGTATATATATGTGTGTGTGTGTATATATATATATATATTTGTG chr4 + 94230402 48958675 48958674 48958726 48958675 48958674 48958726 52 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATATGGAAGTTAGTG .......x......:....:.:.......:......x....:x.x:..x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 118911942 71302613 +3563 chr4 + 190214555 167890013 167890012 167890086 74 GCGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGAAGAATCACTTGAACCCATGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x....:.:...........::........x.xx:x...x............x:..x:xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 91856809 NA +3318 chr4 + 190214555 167898896 167898895 167898983 88 GAAAGAA--------AGAAAGAGAGAGAGAAAGAAGAAAAAGTAAGAAAGAAAGAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAAAGAAAGAAAGA chr4 + 94230402 51148380 51148379 51148475 51148380 51148379 51148475 96 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA .......--------...:................:x.:....xx::..xx:.:.x.::.x.x:...::x........:....::.:..:..::.. 7M8I81M 60/88 68.2% 96/94230402 0.0% 8/88 9.1% 116750516 73464039 +3007 chr4 + 190214555 167898922 167898921 167899016 95 AGAAAAAGTAAGAAAGAAAGAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAAAAGAAAGGAAGGAA chr4 + 94230402 24501321 24501320 24501415 24501321 24501320 24501415 95 AGTATAATTAGGAAGGAGAGAGGGGGGAGAAAAAAAACAAACCAGAATTTAGGAAAAAGAAAATTAAAAAAAAAACAAGAATAGCTAGCATGAAA ..x.x..x..:...:..:...:.:.:....:.:...:x:.:xx....xxx.:....:.:.:..xx...:...:..x.....x..xx..x.x.:.. 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 143397601 46816954 +3083 chr4 + 190214555 167898954 167898953 167899028 75 GAAAGAGAGAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAAAAGAAAGGAAGGAAGGAAGAGACATG chr4 + 94230402 36524365 36524364 36524439 36524365 36524364 36524439 75 GAAAGTAAGGAAAGAAAAAAGTGGGACTGGCGAATAGAGAGAAAAAGAATAGAAGTTGAGAAAGAAAGATCCATG .....x:..:..::.......x::..xx.:x.:.x...:..........x....:xx:..:...:....xx.... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 131374589 58839966 +3300 chr4 + 190214555 167905006 167905005 167905128 123 TACGCATATGTGTATTCCGTATATACGCATATATGTATATATACACACACATATACGCATATATGTATATATACACACACATA----TATGCATATATGTATATATACACACACATACACGCTTATA chr4 + 94230402 21109194 21109193 21109311 21109194 21109193 21109311 118 TATACATGTGTGTCTC-----TGTGGGCGTATTTATATGTA----CTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA ..::...:.....x.:-----.:.:x..:...x.:...:..----.x.........x.:.:..:x....::..:::..x...:----.:..:....:.....:x...::..::..:..:x.x...:. 16M5D20M4D38M4I40M 75/114 65.8% 118/94230402 0.0% 13/114 11.4% 146795812 43418743 +3439 chr4 + 190214555 167905038 167905037 167905107 70 ATGTATATATACACACACATATACGCATATATGTATATATACACACACA---------------TATATGCATATATGTATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ....:.:...:.........x..:.x.:.......:.:.:.:.......---------------..:...x...x..:....... 49M15I21M 55/70 78.6% 85/94230402 0.0% 15/70 21.4% 144657316 45557239 +3557 chr4 + 190214555 167905068 167905067 167905155 88 ATGTATATATACACACACATATATGCATATATGTATATATACACACACATACACGCTTATATGTATATACACACACACATACACATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT---TACATGAATAAATATATATAT ....:.:...:.........x....x.:.......:.:.:.:.......:...x.xxx.x.x..---....::x.:.x...:.:.... 64M3D21M 61/85 71.8% 85/94230402 0.0% 3/85 3.5% 144657346 45557209 +3184 chr4 + 190214555 167905079 167905078 167905140 62 CACACACATATATGCATATATGTATATATACACACACATACACGCTTATATGTATATACACA chr4 + 94230402 61270774 61270773 61270835 61270774 61270773 61270835 62 CATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..::x.:....x..:.............::...::...:.x..:..:..:.:..x:...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 106634305 83580250 +3176 chr4 + 190214555 167905098 167905097 167905172 75 ATGTATATATACACACACATACACGCTTATATGTATATACACACACACATACACA---------TATATGTATATATACACACA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ....:.:...:.........x:.:.xx:.......:.:...:.......:...x:---------..:...x...x...:.:.:. 55M9I20M 54/75 72.0% 84/94230402 0.0% 9/75 12.0% 144657376 45557179 +3404 chr4 + 190214555 167905198 167905197 167905307 110 ACACATATACACATATATACACATATGTATATATACACACATATACACATATATGTATATATACACACATATACACATATATGTATATATACACACATATACACATATGA chr4 + 94230402 21109195 21109194 21109304 21109195 21109194 21109304 110 ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACGA .:....:.::::x.x.:.:x:.:...x.....:...x.........x.:.:..:x....::..:::..x:..:.x:x.:.:.:...:.:..::x.:..::.::..:.:.. 110M 63/110 57.3% 110/94230402 0.0% 0/110 0.0% 146796003 43418552 +3107 chr4 + 190214555 167905428 167905427 167905488 61 ATACACATATATACATATATGTATATATACACATATATATACATATATGTATATATACACA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x.:....x.::.............::...:..:.:.x...:x:.......x:...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 106634653 83579902 +3007 chr4 + 190214555 167920702 167920701 167920751 50 GAAAAAAAAAAAAAAAATATATATATATATATATATATATATAGCCTTGC chr4 + 94230402 1495005 1495004 1495054 1495005 1495004 1495054 50 GAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGC ..........x.:....x..........:.:..:...:......x:x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 166425697 23788858 +5015 chr4 + 190214555 167938688 167938687 167938878 191 TGATTTTTCTCTTCCCAGAGCAGGATTTGATCTAAAAAAACTTCGTTGTCCAAGATTGCTTACACTGTAAAAATTGAGCAAGAAAATAGAGTTAAACT---------------------CTGTGTGCAGCAATTATTCTTGCTGTCAGCAGGAGCAAAATTTGCCACCAAAGGAAA-------------------------ATCAAAAGTACTGTCATGTAGAAGTCAAACAGCACT chr4 + 94230402 65729176 65729175 65729401 65729176 65729175 65729401 226 TAATTGTCCTCT-----GAGAAAGACTTGACCTGCAAAA-----GTTTTCAATGTAATCTTAGAGCACAAAAATGAAGAAAGAAAACAGATTTAAACTTTTAAAACAGTGAATTATATTCTGCAGGCAGCAATTATTTCTGCTGTCAGCAGGAATAAAGTTTACTGCTGTAGGAAACTTGTGAAATGGCAAATGTGTTCCTGTTAAATGCCTTGTCAACTGGAAG-CAAACAGGACT .:...x.:....-----...x.:..:....:..:x....-----...x..x.x.xxxx....x.x:::......x:..x.......:...x.......---------------------...::x............::..............::...:...:.::.::x......-------------------------:.:...x.:x:.....xx.:....-.......x... 12M5D22M5D54M21I57M25I24M1D11M 130/180 72.2% 226/94230402 0.0% 57/180 31.7% 102209512 88005043 +3489 chr4 + 190214555 167938783 167938782 167938841 59 ACTCTGTGTGCAGCAATTATTCTTGCTGTCAGCAGGAGCAAAATTTGCCACCAAAGGAA chr4 + 94230402 65391703 65391702 65391761 65391703 65391702 65391761 59 ATCCTGCGCACAGCAATTACTCCTGTTGTCAGCAGGATGAAAATTTACTACCCCAGGAA .::...:.::.........:..:..:...........xx.......:.:...xx..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 102547080 87667475 +11367 chr4 + 190214555 167943410 167943409 167943834 425 ATTTCCA-TGGTTCAAATTTAAGGC-------TTATTTTTTTCTCGTTTCTATAAGACCAGCTCAAATGTCAGCACATCAGCATATCATTTCATTTTCATTGA--GCTGTTTGCCCGGTATTCACAAATCCAATTACTTTTCTGTAGCATCAAACAAGATTCTTATATGATTTTATTCTGCACT---GAATTTCCTTCCTGCTGTTTTCTGCTTTGCTTGCTTAAAAAAAAAAATCTTCCATTTTTTGGTGATGTATCAGCAGGTTTCATCCTCATCATGGGTGAAACAAACATTCATCCAAGAAGTGAATAGCAGCCTTGCTTCACACATTGAATCTAGTTAAAATGAGGTATCATTGTACAGTTGTTTTCCTGCCAACGATAAGCTTTAGTTTATGACATATAAAACACAGG-----TCCTCACTTTACAGTTTACTTTTA chr4 + 94230402 25971512 25971511 25971927 25971512 25971511 25971927 416 ATTTCCACTGCCAGAAATTTAAGACAGATGATTTATTTCATATCACTTTTTTTAAGA-------AGAAATACTTACATTGGCA---CTTTTTATTTTTACTGGAGGATGTTTGCCCAGCATTCACAAATTCAATTACCTTTCCTCGATACGGAACA-GTTTTTTACATTACTTTATTTTGAAGTTTGGAGTTTTCTTCCTGCTGATTTTTGCTTTGCTTGCTTATTTAATTCCACCTGCCACCATCTGATGATGTGTCAGCAGGT------CTCATCATGGGATAAACAAACA-ACAATCAATAAATAAGAAGCAACTTCAGTTCACACTCTGAATCAAGTTAAGGT---GCATGATT-----GTTGTTTTCCTGACAA-GATTAAATCCTGCTAGTAGTAGATGAAGAAGCGACTTGCCCCTCACTTTATGCTCCACCTGTA .......-..x:xx.........:.-------......:x.x::xx...:.x.....-------.:.x:.xxx:....::...---.x...:.....:.:..:--.x.........:.:..........:.......:....:x::::.:x:....-.x..:...:..x.:......:..x.x.---..:...:..........x...:...............xxx..xxxx.:..x...::x.:..:......:.........------...........xx.........-x..x:...x..:.:.:x....:.:.::x.......x:......x......::.---.:..x...-----............x...-...x.:x.::x.:.x:.:::.x..:..:x.xx.:-----:..........::x.::..:.x.. 7M1I17M7I25M7D19M3D17M2I51M1D27M3I78M6D22M1D53M3D8M5D16M1D34M5I24M 279/398 70.1% 416/94230402 0.0% 45/398 11.3% 141971898 48242657 +3029 chr4 + 190214555 167958287 167958286 167958331 45 TAGGGGGAAAACAAAAATCAAAAAACAAACAAACAAAAAAACACA chr4 + 94230402 10163314 10163313 10163358 10163314 10163313 10163358 45 TAGGGAGAAAAACAAAAACAAAAAACAAACAAACAAAAACCCACA .....:.....xx....x.....................xx.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 157794973 32419582 +3488 chr4 + 190214555 167962629 167962628 167962700 72 TATATATATATACACACATACATGTATATATATACACACATATATATACACA-----------CACATGTATACATATATACA chr4 + 94230402 23247723 23247722 23247805 23247723 23247722 23247805 83 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA .:.:.:...::........x:...x.:....:..........:.:.:.....-----------:.....x...x.......:. 52M11I20M 55/72 76.4% 83/94230402 0.0% 11/72 15.3% 144714906 45499649 +10118 chr4 + 190214555 167987389 167987388 167987634 246 ATAGATGTAGTCCCATCTTTCTGATGGTTGTTCAAGGTGACAGGTGAAATGACTTCTGGCAATTTCACTCAGATCTCCAGAGAACAAGAGTCAAATTCAAGATACAAGCAGTAAAAGAATGTTGTATGAAAGCAATACGGGGCTTGACAGATTGAAACATACTCTCAGTGGGATTGGGAGGAGAGAATAAAGCAAGTCAAGTCCTATTAAATTGTCTATAGGGCTCAATGATTATATTATTCAGGT chr4 + 94230402 25974914 25974913 25975157 25974914 25974913 25975157 244 ATAGACATACTTCTGTTTTTCTGATGGTTGTTACAAGTGATAAATCAAATGACTCTTGGCAGCTGCACTCAGTTCCCCTGAGAATGAGAGTCAAATTCAGAACACGCGCAATAAAAGAAAGTTGTTTAAACGCTCGGCCGAGTTGGGCAGATTGGAACAG--TGTCAGTGGGACAACAAGGACAAACTGAACCTAACCAGGTCTCACAAAGGTGTTCACGGTGTTGGAGGATAATGTCATTCAGGT .....::..x.:.::.:...............xx.:....:.::.x........::.....::.x.......x..:..x.....::.............::.:..:x...:........x.....x.:..x..xxx:.x.:.:.x.:.......:....x--.x.........:x:x:....x.:.x.:..x.x.::..:...::.:x..:x...::.::.x.:.x:.x...x..:.:........ 160M2D84M 166/244 68.0% 244/94230402 0.0% 2/244 0.8% 142012475 48202080 +3795 chr4 + 190214555 167999696 167999695 167999806 111 TCTTTTTCAGTTTACACAAAAGGTGTGCAAAATTTTTTTGTCTTTTTTTTAATCCAAGAATTTACCCTGGTCCCTGTGTATAATCAACAAATATATTTTATCTCATCTGAA chr4 + 94230402 89809520 89809519 89809621 89809520 89809519 89809621 102 TCATTTCTGGTTTACAAAAAAAGTGTGCCAGACTTTTTTTTTTTTCTCTTTTCTCAAGCATTTCACTTG--------ATATAATCAAAGACCATCTCTTATCTC-CCTGAA ..x...:::.......x....:......x.:.:......x.:...:.:..xx::....x....xx.:..--------:.........x:.x:..x.:.......-:..... 69M8D27M1D6M 73/102 71.6% 102/94230402 0.0% 9/102 8.8% 78190176 NA +3470 chr4 + 190214555 168000917 168000916 168000983 67 TTCTCTCTCTCTGTCTCTCTCTCTCTCACACACACACACACGCAGAAAAAAACAGTAAAATATTAAA chr4 + 94230402 75248047 75248046 75248113 75248047 75248046 75248113 67 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaa .:..::......x............x...............:x...:.:.:.x..x:.:.x.xx... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 92752870 NA +3667 chr4 + 190214555 168000921 168000920 168000983 63 CTCTCTCTGTCTCTCTCTCTCTCACACACACACACACGCAGAAAAAAACAGTAAAATATTAAA chr4 + 94230402 75248049 75248048 75248111 75248049 75248048 75248111 63 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaa ..::....x............................:....:.:.:.x..x:.:.x.xx... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 92752872 NA +3029 chr4 + 190214555 168000925 168000924 168000962 38 CTCTGTCTCTCTCTCTCTCACACACACACACACGCAGA chr4 + 94230402 12601304 12601303 12601341 12601304 12601303 12601341 38 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAA ....x....................:.......:..:. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 155399621 34814934 +3606 chr4 + 190214555 168005128 168005127 168005269 142 GATGATAATATGGAAAAGCCATT--TGTATTTGTCGGGGTTCTCTGGAGAAAAAGAAT---------TACGTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATATATATATA----------TATATATATATGATTGAGTA chr4 + 94230402 21109130 21109129 21109291 21109130 21109129 21109291 162 GGTGATGAAATGTCAAAGC-ATCGGTGTATGGGCTGAGCGTATCTGAAAAATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATA .:....:.x...xx.....-..:--.....xx.::.:.xx.x....:.:..x...:.x---------...:.......x.x....x.:....x........:x:.:.....:x::.:..:x....::...:..----------.:.:.....:..xx...:.. 19M1D3M2I33M9I66M10I20M 96/141 68.1% 162/94230402 0.0% 22/141 15.6% 146895998 43318557 +3401 chr4 + 190214555 168005183 168005182 168005259 77 TTACGTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85834536 85834535 85834612 85834536 85834535 85834612 77 TCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA .:.:x.....x.............:.:...xx:.:..x::...:....:..x...:..:.x...::.:.:...:.:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 82170647 NA +3685 chr4 + 190214555 168005183 168005182 168005256 74 TTACGTGTGTGTGTGTGTGTGTGTAT--ATATATGTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85834540 85834539 85834615 85834540 85834539 85834615 76 TTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..::..x...................--..:..x.:...:....:..x...:..:.x...::.:.:...:.:.:.. 26M2I48M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% 82170643 NA +3018 chr4 + 190214555 168005185 168005184 168005242 58 ACGTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATAT chr4 + 94230402 68837093 68837092 68837150 68837093 68837092 68837150 58 ACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT .......:............::.:.:.x..::...:...:.:..::.:.:..x.x... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 99168092 91046463 +3244 chr4 + 190214555 168005185 168005184 168005248 64 ACGTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATATATATAT chr4 + 94230402 70094147 70094146 70094210 70094147 70094146 70094210 64 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT .::.......x...x...x.....:............x.:.xx.x:...x........::.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 97911038 92303517 +3939 chr4 + 190214555 168005187 168005186 168005261 75 GTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATATATATATATATATATATATG chr4 + 94230402 85834542 85834541 85834616 85834542 85834541 85834616 75 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG ....x...............:...xx.....x::...:....:..x...:..:.x...::.:.:...:.:.:... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 82170645 NA +3201 chr4 + 190214555 168006664 168006663 168006742 79 GTGGTGCACACGTGTGGTCCCGGCTACTCGGGGCGCTGAGGTGGGAGGATCACTTGAGCCAGGGAATTTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCAC--GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........--....:..:..:......:.:::x......x:xx.x.:.x.......:..x:.:.::..x:.....:.. 9M2D68M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 91973463 NA +3401 chr4 + 190214555 168039042 168039041 168039106 65 GTGGTGCATACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGA chr4 + 94230402 76033201 76033200 76033263 76033201 76033200 76033263 63 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ........--.x....:.:...........::........x.xx.x...x::...........:. 8M2D55M 50/63 79.4% 63/94230402 0.0% 2/63 3.2% 92005841 NA +15357 chr4 + 190214555 168053416 168053415 168053997 582 TGATAAATAAGAAAAAGAAAT----TTTTTTCATACTCCTAACCCTCAGAAAGTTGT--GTGTAATATATTTGCTTGACGAATGGATATTGTAGTTCAAATCATAAAAAGCAATTACAGTGACATTTTTAACAATCTGCAT-GTATAATAACAATGGTTCTGAAATGCCCATGATTATACATTT-AAACTAACTGCTGTTAATAAAATTGCTTGTTTTAAA-------AAAAATCAGTTAACTTTACAAATGAAATAACAGTTAATACCAATTACCAGTTGTCAAGCTAACCACTGAATATTAAAAGGTAGATATTTTCCTCCTTCGGCTTGTTCAGTCTGCTTCCAAGATCGGGGAATAGGGAATAAAGTTAAACATCTGTGAGATTAGAATGTTAGGGTCAAATATTC-TTCCTTCGGCATTTACACACTACCATTACAGTTATATTTCAACACTATTAATTATGCTTGACTGTCTCCTTGTC--------TAGTTTTGAAAGCAAGTAATTACAGAATATTTATATCCTGAAACATTTCTATATTGCTAGTTCAAAAAATATGCTTTTCAATATAGTGAGATTGTTCTTTCAAAAAAAAGTCA chr4 + 94230402 26003111 26003110 26003701 26003111 26003110 26003701 591 TAATAAATCAGGCAAAGCAGCATGGCTTTATTGTACACTCAACCTTTGAGGAAATGTAAGTGCTATGCATTTGTTTGACAAATGTGTATTGTATTTAAAATCATAAAAA-CAATTACAATGACATTTCCCTCCATCTGTATTGCACAGC-------TTACTGCACTACTCATGATTAAACGTTTTAAACTAACTTCCACAAACAAAAC-ACTTTCTGTGAACAAAGACAAAAATAAGTTCAGTTTGTAAGCAAAATAATTCTTAATACCAATTATCAGTTGCCATGGCAACAATAGATT--CAAGAAGTCTGT-TTTTGCTCGTTTGGCATGGGCAATCTGCTTCCTAGATAGAAGCTCAGAGAG-AAAGTCAAATGCCTGTAGCCTGACAATACCAAGGTCAGACATTCATTCCACTGACATCTGCATGTTGCCATTAAAGTTAGAAGTTAACGCTATTAATTATGCTTCACTGCCTTCTTTTTCTTAAaaataaatcaataaataaataaatGGGAAGTGTTACTGCAGTGAAA-ATTCCTTCCATGGTAGCTAGAAAGAACTGTTTTTGAA-AGAATGTGATTTTCCTTGCAGTATTAGGTCA .:......x..:x....x.::----:...x.::...x.::....:.:::::.:x...--...:x..::.....:.....:....x:.......x..x............-........:........::xx.x.....:..-.:.:.::-------x.x...x.x.:.:........x..:...-.........x.:::x..:....:-:...x:.x.:..-------......x....x.x...::..:::......:xx.............:......:..x.x:...x.:x..x.--:..:.:..xx:.-....x...x..:...x..xx..:.........x....x.::.xx:..:..:-.....:...:::....::xx.x.x...:::.:.....:.:....-....x::.:...:.:..:::.:......x.....x.xx.:...:...............x....:..:...x.:--------..:x.:x:x..::..:...x.:x::.:.:..xx.::xx.....-...:..x:xx..x...:.x:...:.xx..:....x..-.x.:..x....x.:...x..:x.xx.:.... 21M4I32M2I50M1D31M1I7M7D28M1I23M1D12M7I71M2D12M1D51M1D44M1I74M8I43M1D37M1D31M 378/567 66.7% 591/94230402 0.0% 39/567 6.9% 142050305 48164250 +3604 chr4 + 190214555 168056955 168056954 168057037 83 CATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAAGCAGAGACTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:...........::........x.xx.x...x::.........:.:.:x:xx:.:...:.. 8M2D73M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 92023758 NA +8991 chr4 + 190214555 168096200 168096199 168096478 279 TTTTCCTATAGAAAGTAATTCCCAGGACAAAAACTTCCATCCAAGAAATCTGACTTTGATTGTTT---ATCTGCAGTATGACTTACTGAGCAAATATTATTAAAAGGTTATTCATACTTCAGATTGCTTTTCACTATCACAAGACTACATTGTCTGAACTTTACACACTTTGATTCAACAAAAGTTTTGAATCATGCTGTTATGGCTTCAACTTTTACTGAAACTTCTGTAGAACTAATAAGAG--TTGGATTGGAAAAATTAAATTTAACTTTTTCCTTGAAC chr4 + 94230402 26011668 26011667 26011922 26011668 26011667 26011922 255 TTTTATTTTAGTAGATA-TTCCCATGGGAAACA-TTCAGACTAAGCAATCTGACTTTGATTGTTTGCTATCAGCAAAATGACTTAATGAATAAATATTGTAAGAAGGTTGTTCATACTTTAGATTGCTTTT--CCATCACAAGACTGAATTGCCTGAACTTTACACATCACACATTGATAAAAG------------------CAGCCTCAGTTTTAATGGATTCTTTTGTTGAACTGCTTATGGCTTTGGTCAGGAAAAGTTA----TAAC---TTCCTTGTAC ....x:.x...x.::..-......x.:x...x.-...x:x.:...x...................---...x...:x........x...::.......:.x.:......:.........:...........--.:...........:x....:..............::x::xx.::.:.....------------------::..:...::...x.:x..xx...:...x.....:x.x.x:.--....x:x......:...----....---.......x.. 17M1D15M1D31M3I63M2D51M18D42M2I17M4D4M3D10M 188/250 75.2% 255/94230402 0.0% 34/250 13.6% 142084532 48130023 +3155 chr4 + 190214555 168101459 168101458 168101537 79 TTTGACATTTCTTTCT--------TTTCTCTTTTCTTTGTGTTTTTTTTGGGGGGGAAGGGGACGGGGGGAAGCTTTTCCTTACTTA chr4 + 94230402 34825713 34825712 34825799 34825713 34825712 34825799 87 TTTCATATTTCTTACTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGGGAGGGGGGCAATTCTTTTTCTCACCTA ...x.:.......x..--------.x...:...::...x.x........x......::...::x....x:.xx.....:..:..:.. 16M8I63M 57/79 72.2% 87/94230402 0.0% 8/79 10.1% 133275746 56938809 +6357 chr4 + 190214555 168128029 168128028 168128196 168 GTTGAAACATTAACATGAATTATTACAATCA-------CTTTCTCATTGATTTTCCCACCAGGTGCAAGGAACCATCTTCCCAGCTCCCAATTTCAATCCCATAATGGATGCCCAAATGCTAGGAGGAGCACTCCAAGGATTTGGTAAGT---CTGATTATTTCTA--CCATCTTTTATT chr4 + 94230402 26016316 26016315 26016483 26016316 26016315 26016483 168 GTTAAAA----AATATAAAACACTGCAATTAAAGGCTTCTTTCTCCTT--------TAGCAGATACAAGGAACAATTTTTCCAGCTCCAAATTTTAACCCTATTATGGATGCTCAGTTGCTAGGAGGAGCCCTACAAGGAATTAGTAAGTATCCTGGCATATTCTAATACACCTTTTATT ...:...----..:..:..x:.:.:....:.-------.......x..--------:.x...:.:........x..:..:........x.....:..:..:..x........:..:x.............x..x......x..:......---...::xxx.....--x..:........ 7M4D20M7I10M8D94M3I13M2I12M 121/156 77.6% 168/94230402 0.0% 24/156 15.4% 142111713 48102842 +6612 chr4 + 190214555 168139475 168139474 168139587 113 TTCTTTTCCAGACTGTGACAAAGACATGCTGATCAACATTCTGACTCAGCGCTGCAATGCACAAAGGATGATGATTGCAGAGGCATACCAGAGCATGTATGGCCGGGTAAGGC chr4 + 94230402 26018837 26018836 26018949 26018837 26018836 26018949 113 TTCCTTTCCAGGTTGTGAAAAAGATGTGTTGATTGACATCCTAACACAGCGCTGCAATTCACAGCGGCTCATGATTGCTGAGGCATACAGAGACATGTATGGCAGGGTATGAC ...:.......::.....x.....::..:....::....:..:..x............x....:x..x.x........x.........x::::..........x.....x.:. 113M 87/113 77.0% 113/94230402 0.0% 0/113 0.0% 142120638 48093917 +3062 chr4 + 190214555 168153418 168153417 168153469 52 AAAGCAAAAAAAAAAAAAAAAAAACAAAAACAAAAACAAAACAAAAAAAAAA chr4 + 94230402 33844415 33844414 33844466 33844415 33844414 33844466 52 AAAGTAAAAAAAAAAAGCAAAAAACAACAACAAAAAAACAACAATATATAAA ....:...........:x.........x........x.x.....x.x.x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 134309003 55905552 +3074 chr4 + 190214555 168153444 168153443 168153492 49 AAAACAAAAACAAAACAAAAAAAAAAACCAATAACAACAACAAAATAAG chr4 + 94230402 45151593 45151592 45151641 45151593 45151592 45151641 49 AAGGCAAAAACAAAACAAAAAAAAAACAAAACAACAACAATGTAATAAG ..::......................xxx..:........::x...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 123001851 67212704 +3922 chr4 + 190214555 168155694 168155693 168155900 207 ATATATTATAAATATATAATATTAT--ATAATATAATATATGATATATCATATATTATATATTATATAATATATGATATATCATATATTATATATTATATATAATATATAATATATGATATATTATATATGATATATGATATATCATATATAATATAATATATCATATATGATATATCATATATTATATGT-TATATATAATATATGATA chr4 + 94230402 46018750 46018749 46018945 46018750 46018749 46018945 196 ATGTAGTAGGAATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTA-ATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTG--ATATATGATAAAT-----ATGGCATATAATATATAAAAGATAAT---ATACAGTACATAGAATATATTA---GTCGTATGTATAGATATGATAAAGGTTA ..:..x..x:......x..x..:.x--..xx.x...x.:..xx...:.:.-..x:.xx...:.::...x:..x::..:xx.....x..::.....x:.....:x.:.:--..........x..-----...::....:......x.x.x.....---...:.x:.:...x:......:.---:.::.....-..x....:...x.x.x.. 25M2I23M1D57M2D13M5D26M3D22M3D9M1I18M 130/193 67.4% 196/94230402 0.0% 17/193 8.8% 122136944 68077611 +3195 chr4 + 190214555 168156167 168156166 168156276 110 TATATTATATTATATATTATATATTATATATAATATATATTATATTATATGTAATATGTATTATATTATATATAATAGTATATATTATATATAATGTATATATTATATAT chr4 + 94230402 71903454 71903453 71903558 71903454 71903453 71903558 105 TACATTATCGAATGTATTATATATGAAATGTTAGGTATTTTA-ATCATC----ATATGTATTATGATTTATATAAGATTAAACATGTTACATATATAATGCATTATATAT ..:.....xxx..:..........x.x..:.x.x:...x...-..:..x----...........:x.x.......x.x..x.:..xx..:...xxxx..::......... 42M1D6M4D57M 75/105 71.4% 105/94230402 0.0% 5/105 4.8% 96252713 93961842 +5280 chr4 + 190214555 168164184 168164183 168164303 120 TTTCCTTTCTCT-----AGGGAGTAGGCACTGATGAGAATTGCCTCATTGAAATACTAGCTTCAAGAACAAATGGAGAAATTTTCCAGATGCGAGAAGCCTACTGCTTGCGTAAGGAAATATACA chr4 + 94230402 26022865 26022864 26022989 26022865 26022864 26022989 125 TTTACTTCCTCCTACGCAGGGGGTAAACACAGAAGAAAAGTGTCTAATTGACATATTAGCCTCAAGATCAAATATGGAGATATTCCAGATGAAAGAAGCCTACTTAACACGTAATGTATTTTACA ...x...:...:-----....:...::...x..x..:..x..:..x.....x...:....:......x.....:x:..:..x.........x:...........xxx::.....x.x.x.x.... 12M5I108M 88/120 73.3% 125/94230402 0.0% 5/120 4.2% 142141319 48073236 +6263 chr4 + 190214555 168165221 168165220 168165334 114 TACCTTTAACATGTTTTCTT--ATACAGAATACAGCAATAACCTCCAAGAGGACATTTATTCAGAGACCTCAGGACACTTCAGAGATACTCTCATGAACTTGGTCCAGGTATGGCA chr4 + 94230402 26023599 26023598 26023714 26023599 26023598 26023714 116 TACATCTCACATTTTTGTTTTAATCTAGAATACAACAGTGATCTTCAACAAGATATCGATTCTGAGACTTCAGGGCACTTCAGAGATACTCTCATGAACCTGGCTCAGGTACTGCA ...x.:.x....x...x:..--..x:........:..:.:.:..:...x.:..:..:x....x.....:.....:........................:...::......:x... 20M2I94M 88/114 77.2% 116/94230402 0.0% 2/114 1.8% 142141622 48072933 +3214 chr4 + 190214555 168166585 168166584 168166679 95 ACATGTCTTAAAAGCCAGAATTTTGGTTTGGTTTGGTTTTGTGTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 85834497 85834496 85834585 85834497 85834496 85834585 89 ACCTACCTTATTTGCCAGAATGT------AGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGT ..x.::....xxx........x.------:......x...x.xx...:.x.....x.................:.xx:...:x.::.:::.:... 23M6D66M 62/89 69.7% 89/94230402 0.0% 6/89 6.7% 82332088 NA +10988 chr4 + 190214555 168177729 168177728 168178050 322 TTACTTTAC------AGGGGACCAGAGAGGAAGGATATACAGACCCTGCGATGGCTGCTCAGGATGCAATGGTAACTAGAACCAG----------TTCTCAGACTGA--------------------CTGCAAAGAACCTGGGTTAAAATGGGCTGGAGTGGTTCTGATGCTACTTCTCTGCTGGCTAATGTTCCAGGTCCTATGGGAAGCCTGTCAGCAGAAGACGGGGGAGCACAAAACCATGCTGCAAATGATCCTGTGCAACAAGAGCTACCAGCAGCTGCGGCTGGGTAATTATTAACTGGGTTTCGTTCCAGCTACTTGACCAATTATATAACAAAAAGAAGGTGGTTAACT chr4 + 94230402 26026089 26026088 26026424 26026089 26026088 26026424 336 TTATTTTACCCCCGCAGGGAACAAGAATGGAAGGATATGCAGATCCTTCTACAGCTGCTCAGGATGCAATGGTAAATATAGGCAGACGTGGGCATCTCTCACATTAAAAAAAGAAGAAATGCTGATGTTGAAAAG----TGATTCAGAATTATTTAAAATCTTCTGCATTTTTCTCTTTTTCTGG----TATAACAGATTCTATGGGAAGCCTGTCAGCAGAAAACAGGCGAACACAAAAACATGCTGCAAATGATACTGTGCAACAGGAGTTACCAGCAGTTGTGGATGGGTA---ATCCAGTGG-------TTCAGCTATTGGACC----ATACAGCGTAAAGGAAAAATCTAACT ...:.....------....:..x...:x..........:....:...x.x.::......................x..x.:x...----------:.....x.:.:.--------------------:..x....----..:x.:.:...x:x:.::.:.xx.::xx..x:.x..::.:.x....----.:.xx...:.:.......................:..:..x..:.......x...............x..........:...:.........:..:..x......---..:x.x...-------.:......:.x....----...:.:.:x....:.::x:x:..... 9M6I70M10I12M20I8M4D46M4D105M3D9M7D15M4D26M 222/300 74.0% 336/94230402 0.0% 58/300 19.3% 142151640 48062915 +8271 chr4 + 190214555 168179214 168179213 168179341 128 AAGTTTTCCAGGAATTTCAAAATATTTCTGGGCAAGATATGGTAGATGCCATTAATGAATGTTATGATGGATACTTTCAGGAGCTGCTGGTTGCAATTGGTAAGTAATAA-ATTATTTGAAGCACAACA chr4 + 94230402 26027904 26027903 26028032 26027904 26027903 26028032 129 AAGTTTTCCAGGAGTTCCAGAATATCTCTGGGCAAGACCTGGTAGATGCCATCAATGACTGTTACGATGGATACTTTCAAGAACTACTGGTTGCAATAGGtatataaaaatattattttataCTCAATA .............:..:..:.....:...........:x.............:.....x.....:..............:..:..:...........x....x:...x..-.......x.x:.x...:. 110M1I18M 107/128 83.6% 129/94230402 0.0% 1/128 0.8% 142151310 48063245 +4504 chr4 + 190214555 168181673 168181672 168181748 76 TTTCTCCTAGTTCTCTGTGTTCGAGACAAACCAGCCTATTTTGCTTATAGATTATATAGTGCAATTCATGTAAGTA chr4 + 94230402 26028588 26028587 26028663 26028588 26028587 26028663 76 TCTTTCCTAGTGCTCTGTGTCCGTGACAAGGCTTCCTACTTCGCTTACAGACTTCATAATGCGATTCATGTAAGTA .:.:.......x........:..x.....:x.xx....:..:.....:...:.x:...:...:............. 76M 59/76 77.6% 76/94230402 0.0% 0/76 0.0% 142153085 48061470 +3215 chr4 + 190214555 168183002 168183001 168183110 109 CGTCTCGGAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAAGAAAGTCTCATAGAGATAATTATATACATGTCGTAGCCTTGAAAACTCAAAGAAAACGATTAA chr4 + 94230402 54113482 54113481 54113587 54113482 54113481 54113587 106 CATGCCAGAAAAAAAAAAAAAGAAAAAATGCATAAAGATAGAAAAAGCAAGCATTAGCAATTCAATGATGTGAATATCATACCTCTAAA---TTAAATAAATCAGCTAA .:.x:.:..............:......x:x.x..::.x........x...:x.:.xx:.xx:...x..:.:x..:..:..x.::.:..---.:...x...x.:::... 89M3D17M 68/106 64.2% 106/94230402 0.0% 3/106 2.8% 114069520 76145035 +3208 chr4 + 190214555 168183017 168183016 168183060 44 AAAAAAAAAAAAAGAAAAAAGAAAAGAAAAAGAAAGTCTCATAG chr4 + 94230402 62176315 62176314 62176358 62176315 62176314 62176358 44 AAAAACAAAAGAAGAAAAAAGAAAAGCAAAAACAAGTCTCATAG .....x....:...............x....:x........... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 106006702 84207853 +9607 chr4 + 190214555 168184532 168184531 168184693 162 TTTCTCCCACTTTTCTGTATCTTTTAGGACTTTGGTTTCCATAATAAAACTGTAATCAGGATTCTCATTGCCAGAAGTGAAATAGACCTGCTGACCATAAGGAAACGATACAAAGAGCGATATGGAAAATCCCTATTTCATGATATCAGAGTAAGTTTCCGA chr4 + 94230402 26030630 26030629 26030791 26030630 26030629 26030791 162 TTTTTCACATATTCTTCTCTGTTTTAGGATTTTGGGTTTCACAATAAAACAGTCATAAGGATTCTCATTGCCAGGAGTGAAATTGACTTGATGACTATACGACAACGTTACAAAGAGAGATATGGGAAATCACTCTTTCATGATATTAAAGTAAGTTTTTGA ...:..x..:x..::.x.x.x........:.....x..:..:........x..x..x.................:........x...:..x....:...x.:x....x.........x.......:.....x..x...........:.:.........::.. 162M 129/162 79.6% 162/94230402 0.0% 0/162 0.0% 142153902 48060653 +5546 chr4 + 190214555 168187353 168187352 168187457 105 TTTTTCTTTT-CAGAATTTTGCTTCAGGGCATTATAAGAAAGCACTGCTTGCCATCTGTGCTGGTGATGCTGAGGACTACTAA-AATGAAGA----GGACTTGGAGTACTG chr4 + 94230402 26031646 26031645 26031756 26031646 26031645 26031756 111 TTTTTCTTTTGCAGCATTTTGCTTCAGGGCATTATGAGAGTGCTTTACTCGCTATCTGTGCTGGAGATGCTGAAGATTATTAAGAAAGAAGATGATGGATTTTGAAGGCTG ..........-...x....................:...:x..x:.:..:..:...........x........:..:..:...-..x.....----...:..x..:x:... 10M1I72M1I8M4I15M 86/105 81.9% 111/94230402 0.0% 6/105 5.7% 142155707 48058848 +3010 chr4 + 190214555 168188545 168188544 168188596 52 CAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472497 51472496 51472548 51472497 51472496 51472548 52 CAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ....::......:x.......:.......x.:.:.......:x..:.:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 116716048 73498507 +3063 chr4 + 190214555 168188546 168188545 168188595 50 AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:....x..........:.:..:...:.....x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 166693540 23521015 +3095 chr4 + 190214555 168188546 168188545 168188593 48 AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495008 1495007 1495055 1495008 1495007 1495055 48 AAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .......x.:...............:.:..:...:.....x....::. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 166693538 23521017 +3206 chr4 + 190214555 168188546 168188545 168188597 52 AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548421 85548420 85548472 85548421 85548420 85548472 52 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA ............:.:x.....:...:.:.:.::...:..........x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 82640125 NA +3314 chr4 + 190214555 168197635 168197634 168197703 69 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCATGAGAATGGCGTGAACCCGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::......--...x......:...........::.......:x.x..x...xx:.x.......:.:. 10M2D57M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% 92164438 NA +4722 chr4 + 190214555 168236247 168236246 168236387 141 TTTACCTTTGATTGATAAAACTCGAAGTGTGCATCTTGGAA---CTTTGG------TGGAAAATATCTTCTTCCAAAGAGATGTGCCAATACTAATACTAGCTTTTCCATAACGTCTTGAGAAAAATGTTTTGAGCCTATA-TAAAACAAA chr4 + 94230402 26052320 26052319 26052461 26052320 26052319 26052461 142 TCTACCTTGGACTGGTAAAA---------TGTGTGTTGAAATGCCTTTGAGCAGGCTGGAAGGTGTCTTCTCCCAAACAGATTTGCCAGAATGAGCACCAGCTTTTCTAGGACTTCTTCTGAAAAATCAGTTGATCCTATACCAAAACAGA .:......x..:..:.....---------..::.x...:..---.....:------.....::.:......:.....x....x.....:x.:x.::..:........:.x:..x....xx.......xxx....x......-:......:. 20M9D12M3I6M6I85M1I9M 98/132 74.2% 142/94230402 0.0% 19/132 14.4% 142183927 48030628 +9035 chr4 + 190214555 168237264 168237263 168237439 176 ATATATAAAATCTCAAGCTTACCTTTCCTGGTTGGCTGACAGAGATCATGGAAGAGTCCATTTACAAGAAAACTGACAAAAACAAGATTAGAAGGTTCATGATAATGCAAATGTGATACAAGTCCAGCAAACCCCATAGGATTACCTTCTTGATCTAAATAGCCCTA--------AAGAACAAA chr4 + 94230402 26053051 26053050 26053232 26053051 26053050 26053232 182 ATGCATGAAGTATTA--TTTACCTTCCTTAATTGGCTGGCACAGTTTGTGGAATAAACCTTTCGTAAGAAAACTCACTAAGACAAAATTTGAAGGTTCGTGATAGTGTAAGTGTGTCACAAGTCCAGCAAAACCTATGGGGTTACCTTCTTGATCCAAGTAGCCCTGTTTAATTTAAGAGCAAA ..::..:..:.x.:.--:.......:.:.::.......:..x..x.::.....x.:x..x..:::.........x..x..:....:...x........:.....:..:..:....x:..............x..:..:..:..............:..:.......:--------....:.... 15M2D150M8I9M 132/174 75.9% 182/94230402 0.0% 10/174 5.7% 142184213 48030342 +5429 chr4 + 190214555 168237681 168237680 168237806 126 TAATGCATACCTCTTTCACCAGGAACTGCAAAGAAAACAGGAAGTAAAGTTTTAACATGTCCATGACTCTGGGTTGCTTGAAGGACAGCAATGAATGCTTTAGCACTGATAGCACCTTTAAAGAAA chr4 + 94230402 26054269 26054268 26054394 26054269 26054268 26054394 126 TAAAACCTACCTCTTTGATAAGAAACTGCAAAGAAAACATAAAGTAAATCTTTAATATTCCAGCATATCTTTCTTTTTTGAATGACATCAGTGAGTGCTTCAGCACTGACAATGCCTAAACAAAAA ...x:.x.........x.:x..:................x:.......x:.....:..x:.x:::xx...xxx..x:.....x....x..:...:.....:........:.:::...xx.x.:... 126M 88/126 69.8% 126/94230402 0.0% 0/126 0.0% 142183412 48031143 +11128 chr4 + 190214555 168246408 168246407 168246632 225 AGCACGGTACCTTTGCCTTGGCATCCTCTGGGTCATCTCCCTTGGAAGCCAGCAGCATGAGTCGCAGGACCAGGGTTATGCTGAGAGGGAAGTGTCCTCTCAGCTCAGGAACATTGGATTTTATGAGTTTTCCTATTTTGGGGAATGGAATATCAAAGAAATATACATCTCCCATCAGGTCTTGACCTCTTCTTCCAGCACGGCCAGACATCTGAAAAGAGAATA chr4 + 94230402 26055423 26055422 26055647 26055423 26055422 26055647 225 aatatGAAACCTTTGCTCTGGCATCCATTTTATCATCAGCCTTTGCAGCCAACAGCATGAGTCTCAGTATTAAGGAAATAGTCAGAGGAAACTGGCCTTTCAATTGAGGTACATTGGATTTGATAAGTCTTTCAACCTTGGGCAGTGGAATATCATAGAAGAACACATTTCCAATCATATCTTGACCCCGTCTTCCAGCACGCCCTGACATCTAAGAATATAATA .::.:.:x........::........x:.xx:.....xx....x.x.....:...........x...x.::.:..xx..:x.x.....:..x..x...:...::.x...x...........x..:...:..:.x.::.....x.:..........x....:x.:....:...x....x:........:.x............x..x.......:.:..x.x.... 225M 165/225 73.3% 225/94230402 0.0% 0/225 0.0% 142190985 48023570 +6905 chr4 + 190214555 168248145 168248144 168248361 217 TATTTCAGCAATACAATAAGCAAGTTTATGCATTTTGCA-ATACCTGTCTATAATTCAACGCATCCAGATAGACTGAGTTTTGAGCAAAAACCACAGATTTACAAGGCATGTTGACACCTAAAGCAAGTGTTCCAGTAGCTGTCACCACCTTGAAAGAGAATAAAACAATTACTTC---ATAAAATAGCATTTTAATAGAATGCAAGTATTTCCTGTCATA chr4 + 94230402 26056521 26056520 26056734 26056521 26056520 26056734 214 TGTTCTTGTAATATAAATAGCAG----ATGTTCTATACACATACCTGCCTGTAATTTAGTGCATCTAAAAAGACAGAATCTTCAGCAAAGACAACAGATCTACACGGCATGTTGATCCCTAGAGCGAGTGTTGAAGTAGCTGTGACTACCTATAAAATATTAAGCACAAGTACATCTGTAAGAAATGGCAAT---ATCAAATTTAAAAACAGTCTGTAATA .:..::x.:....:..xx....:----...:x:.x.:..-.......:..:.....:.::.....:.:.x....x..:.:..x......:..x......:....x..........:x....:...:......xx.........x..:....xx...:x:xxx.:x....x...x..---.x:....:...x.---..x:...x:..:x.:xx:....x... 23M4D12M1I136M3I13M3D26M 145/210 69.0% 214/94230402 0.0% 11/210 5.2% 142191624 48022931 +7315 chr4 + 190214555 168250909 168250908 168251221 313 AAACAGTCACAATTTCAATTTTTAGAATGAAGAAAATTCACCTACCCTAAGATATCCTTTTCTAAAGAGGATTTCAACTAATTGTTTTTCTTTGAAACTCATAGCACTGTGATGATATCCAATACCCCTTTCTGCCAAGGCTTTCAATTCTTCACCTTTTCTTTCAAATTTTACTCGACCAAATACCTTCTGCAAAGTCTAAAAGAAGCAAGACATTTAGGGATTATGATTTAATTTTAATTATAATTAAAAATGTCTAAATGAAAATAACATGCATACTATGTAATAATTTGGCTAAACAGGCAACTATTTG chr4 + 94230402 26056849 26056848 26057130 26056849 26056848 26057130 282 AAAAAACCCCAAAATTAATCTTTA------------TTTTCCAACCTTGATATATCCCAGCCTGAAAAGCATCTCCACTGTTTGTCTTTCCTTCATGGCCATAGCTCCGTGATGATACCCAATGCCCCTCCGTGCCAGCGTTTGGTGCACATAACCTCTTCTCTGAAACCTAAGTCGATAAAAGATCTTCCTCAAAGTCTACAAATAAAAAGAAGT------------GTTAAACATTAATCATAACCAAGTGTTGCC-AATGAAAATAAAATAAAT-CTCTTTAACA-----GCTAAAAGTCCAAGCACTtg ...x.::.x...xx.:...:....------------..:x..x...:.:.x......:xx:..:..:..x..:..x...:x....:....:..x.x:x:......x.:.........:.....:.....::x.....:x.:..xxx::x.x.x....:....:.x...::.x.x....:x...x.:....:x.........x..:x.:x....x:.------------:..x..:x.....:....::..:x:.xx.:-...........x..:x..-..x.x...:.-----......x:xx...x:.:... 24M12D180M12D30M1D18M1D10M5D20M 186/282 66.0% 282/94230402 0.0% 31/282 11.0% 142194060 48020495 +5912 chr4 + 190214555 168261989 168261988 168262150 162 ATGAAAATTACCTGCTCTACGTTGCCATTTTTAATCCAACTTGTTAATTCTGCCTTTAGACTCTCTTCATATTTCCTAGCATCCATCTTTTTAATGACTAATTTATTGTTAAAATGAATGAAGTTTTCTGGGCACAGTTCCTTGAAAACAAA--TATTACAAAA chr4 + 94230402 26062358 26062357 26062521 26062358 26062357 26062521 164 ACAACAGTTACCTTCTGTCTTTGTCCAACTGCAATCCAGTTGCTTAGTTCTTTCTTCAGTTCCTGTTCATATTTCCTCACATCCATCTTTTTTATCACTATATTATTCTTGAAAGAGACAAACTCCTCGGGATCCATCTCCTTGAAAACAACATTGTTATAAAA .::.x.:......x..x.x:x.xx...x:.x:......::.xx...:....x:...:..x::..x............x:.............x..x....xx.....x..:...x::.::..x.::..x..::x..x:.............x--.:...:.... 152M2I10M 110/162 67.9% 164/94230402 0.0% 2/162 1.2% 142199631 48014924 +7297 chr4 + 190214555 168267548 168267547 168267996 449 TACTTAGA---ACAAATATGGCTAAAATATTACCTACATGATCTGTTGTTAGTGCAGCACATGGGTGAAAATGATCAAAATGAATGTCACCATGTTTTATTGAACATACATGCTTCTCTAGATCATTATACCTCTCTCCATAGAGCACT----------AAAAATG-AAGAACAAGAATTTCCACATCAATGGAAATGTAATCAC----------------------TGAAACAAATTTAAAGTAAACG---------------GCATCAAGATCAAGGCAATGGCAGATTTTTTAAAAATAATAAAATAAAAGGCAAGCTTTATATAAATATATCAA-ACATACCAAGTCTAACTTTATACGATTGTTTTACT--------TGCAAGTAGTCTTTGGGAAAGCCGGCCTGACGACCCACATGTCTTTTAGAAGCGGTATTATTTTCAATTATT---TTGTCTTCTTGTTTCCAGTACCATTTTACCGATTGTAGCCACCTTAAAAAATAAA chr4 + 94230402 26062810 26062809 26063297 26062810 26062809 26063297 488 TACTTAGATACACAA-------TACAACAATACTTACATGATTGACTGTTAATGCAGCACATGGGTGAAAATGTTCGATGCCAAAATCACTGCCATTTACAGAGCACACATACTTCTCCAAATCATTGTATCTTTCTTCATACAGGACTGTGAAGAGACAAAAACGTAATGACACAATTGTTTGTTTTAAAAAATAAGTATGTACCATTGCAATATTTATTTTTATTTGAAACATATATAATGTATGTACATGCATATGTTCATGCAGTGTGATTAAAATGCTTGCAGA------AAGGACACTACATTCATTTATTAGTTACA---AAACATTCCAATACACACCTAGTCTAACACGGTATGACTTTTTTTGTTCTTTTACTGTAGATGTTCCTTT---ACATTTTCTTG-----CAAAATTCTTTTCAGAGTTGGTAGAGCTTCCTTTTATTGTATTATCAGCACACTGCCAATACCTTTTCACAGACTGTAACCATCTTCAAGAATAAA ........---....-------..x..:.x...:........:x::.....:.....................x..:.x::x..x:....:::xx....:x..:..:....:......:.:......:..:..:...:....x..x...----------.....:.-..x:...x:.x.x.::::x.:..x::.x.x...xx:..----------------------.......x..x...x...x:::---------------...x::x...:..::::x.x.....------..::.:.x..x.x.x.xxx::x..:.x:.---...:..x:...-...:...x........x:x:..:..:.x....xx.--------..:.::.:x..:..x---.x:::xx.:..-----.x.x..x::...:...:x:....xx::..:.xx.....---..:..xx.x:::.x...:....x...:..x..:....:...:...x..:...... 8M3I4M7D127M10I7M1I38M22I22M15I25M6D29M3D11M1I35M8I15M3D11M5D38M3I55M 274/425 64.5% 488/94230402 0.0% 87/425 20.5% 142204738 48009817 +8522 chr4 + 190214555 168268833 168268832 168268997 165 AAATTGAAACTT--AATGCCTACTCGGTGAGATGTTCAGGATTACTTATGGTAGCTGAAAGAGCCAAAAAGGGACATCGGATCATGACAAGGAGATGTTCCCAGATTTCTGCTCCAATTTCTCCACCAAGACAATGAACCTA----TTAAACAAAAAAAAAAAAATCTCAA chr4 + 94230402 26063793 26063792 26063963 26063793 26063792 26063963 171 AAATTAAAAATTTGCAAGCATACTCAGTCAGGTGATCTGGATTACTGATAGTAGCGGAGAGAGCCAAAAATGGACATCGAATTGTTACCAGAAGATGCTCCCAAACCTCTGCTCCAATTTCACCACCAAGACAGTGAATCTATATTTTTGGGAAAAGAAAAATGATTTTAA .....:...x..--x.x..x.....:..x..:..x..x........x..:.....x..:...........x........:..::.x..x..:.....:.....:.::..............x...........:....:...----..x::x....:.....x:..:.:.. 12M2I128M4I25M 128/165 77.6% 171/94230402 0.0% 6/165 3.6% 142205040 48009515 +3023 chr4 + 190214555 168270852 168270851 168270912 61 TTCCCCCTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTT-TTTTTGGAGATGGAGTTTCGCTC chr4 + 94230402 56907967 56907966 56908028 56907967 56907966 56908028 62 TTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTTCTTTC ....:...::x.:....:...:................-.......x:.x..xx....x:.. 38M1I23M 47/61 77.0% 62/94230402 0.0% 1/61 1.6% 111362885 78851670 +5680 chr4 + 190214555 168273265 168273264 168273400 136 TTAAAATACCC---------TACCTGACAGTTTAAGGCATCATGACGATACTCCCTGGTGAAAACACCACAGAGAACTTCACCACTTGGCAGATTTTTCGTAAAACGATTCTGAACAGTTGCTGCCACTTGATTAACAAGGGCCT chr4 + 94230402 26065673 26065672 26065817 26065673 26065672 26065817 145 TTAAAACACCCATAAGAATATACCTGAGAATTCATGACATCATGGCGATAATCTCGTGTGAAGACTCCACACACCACCAATCCATCTGGAAGTTTCTTGGTGAATCGACTGTATACAGATCCCACCACTTGATTTACAAGGGCCT ......:....---------.......x.:..:.x.:.......:.....x..:.xx.....:..x.....x.xx..:xxx...::...x..x..:..x..:..x...:.x.:x....x.x.::..........x.......... 11M9I125M 99/136 72.8% 145/94230402 0.0% 9/136 6.6% 142207592 48006963 +10482 chr4 + 190214555 168273926 168273925 168274115 190 AGCACTACCTTTGTGGGTGCAACGTACACGACCACCCCGTCGTCGCTCTCCTTCAGCACTTTCTCCATACAGTAGTAGGAGGCATAGGTTTTGCCTGAGGACGTTGGGGCAACAATCACTGCTGACTCATTCTTATCCACAACATCAAGGAGCTCTCGCTGCAGGGTGCAGAGTA-CCATTCATGTCAAGA chr4 + 94230402 26066629 26066628 26066816 26066629 26066628 26066816 188 AGCCTTACCTTTGTGGGAGCAACATACACAACTACTCCTTCATCACTCATTTTCAGAACTTTCTCCATGCAATAATATGAAGCATATGTTTTTCCTGATGATGTGGGAGCAACAATCACCGCAGACTCATTATTATCTACAGCATCGAGAAGTTCTCGCT---AAGAGAAGAGTAGTTATTTATGTCAAAA ...x:............x.....:.....:..:..:..x..:..:...x::.....x...........:..:..:..x..:.....x.....x.....x..:..x..:...........:..x........x.....:...:....:..:..:.......---::.x.x......-::...:.......:. 160M3D12M1I15M 146/187 78.1% 188/94230402 0.0% 4/187 2.1% 142207297 48007258 +7310 chr4 + 190214555 168275334 168275333 168275549 216 TGCAGTATTACCTGCCATGTGTCGGGAATAAAATCCTGGACCCTGGGATCTGGGTCTTTTCTCTCATCTCGTATCAAATAATGGCCCATGTATTGCAGTTGGAACCGAGCTGGCCCAATGCCAACTGAATATTTATTCCTTTTCTTCACTTTTACATCATTTTCTGCATCCTGCATTATTTTAAAAGTCCATTTTGAAAATGACATTGAATTAGAA chr4 + 94230402 26067761 26067760 26067963 26067761 26067760 26067963 203 TGCCTCAATACCTGCCATGTGTCTGGTATGAAATGTTGCACTCGGGGATCTGGATCGTTCCTCTCTTCTCTGAGCAAGTAATAGTCCATGTATTGCAGCTGAAAGCGAGCTGGTCCCACCTCAACATCATAGTTGCTTCTATTCTG---------ATCATCTCTTCCTTCTCTCA----TCTATAAGGTCATATTAAATTTCAAGTTGGTTTGAAA ...xx:.x...............x..x..:....x:..x..:.x.........:..x..:.....x....xx.x...:....:.:.............:..:..x........:..x.:x:....xxx...x..::.:..x....x---------.....:.::.x.x..::x..----.:..x...x:...x..:..xx.x.x:...:x..::.. 146M9D20M4D37M 141/203 69.5% 203/94230402 0.0% 13/203 6.4% 142207573 48006982 +3521 chr4 + 190214555 168281000 168280999 168281082 83 CATGGTGGCACGCTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCCCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..x.x......:...........::........x.x..x...x.x........::.:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 92247803 NA +5407 chr4 + 190214555 168284815 168284814 168284955 141 CTTACCATCAAACTGACACCTGGACCTGTCATAATCATCACTCAGGGGTTTATGAGAATGCCAGTGCACAAGTTCATCAAATTCCTTTTGTTTAACCAGTGAAGTAACAATAGGATCATCACTGTGAGACAAAAAAAGGCA chr4 + 94230402 26073325 26073324 26073465 26073325 26073324 26073465 141 CTTACCATCGGCATTGGACCGTACTCGTTCATATTCCTCAGACAGTGGTCTGCCAGAATGCCAGTGACGAAGCTCATCAAATTCTTTGTATTTAGCAAGTGAAGTAACTGCAGGATCATTGCTGAAACATTAAACAGTGCA .........::xx.x:x...xx:x:.xx.....x..x...xx...x...:.::x............xxx...:...........:..x.:....:.x...........x::........::...x:.x.:x...x.:x... 141M 96/141 68.1% 141/94230402 0.0% 0/141 0.0% 142211490 48003065 +4312 chr4 + 190214555 168285388 168285387 168285524 137 TATACCTCTTTAGAAAAGGCAAATCTTTCAAAATATCTCCAGCAAATTTATCAACCACAAAAGATGACGTTGGAATAAAACCCAAATTGGGCACCATTTCATTGGAGCTGTCTGTAAACAAACAAAAAAAAATTGAG chr4 + 94230402 26074173 26074172 26074305 26074173 26074172 26074305 133 TGTACCTTTCTAAAACAGGTAGGTCTTTCAAAACATCTCCAGCGTATTCTTCAGCAAGATCAGATTTCAATGGGATTAGTCCTATATCAGGAATTTTTTCATCACAGAC-TTTATA---AAATAAAAAGAGAATGAG .:.....:.:..:..x...:.::..........:.........:x...:x...:.x.x.xx....xx.:x...:..x.:x..:.x..::..x.::x......::x..x:-.:.:..---...:.....:.:.x.... 109M1D6M3D18M 88/133 66.2% 133/94230402 0.0% 4/133 3.0% 142211215 48003340 +4160 chr4 + 190214555 168285894 168285893 168286058 165 AGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAAAGGAAAGAATGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGGAGGGAGGGAAG--GAAGGATGGAGGGAGGAAGGAAGGAAAGAAAAAAGAAAAAGAAA chr4 + 94230402 49044660 49044659 49044827 49044660 49044659 49044827 168 AAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA .:.:..:..:...x:.::..xx:::..x:.xx..:...:x.:.x..x...:.:x:xx::.x.:......:....:.x..........::..:.-:..:..x........:..::..:x....--...::x..:::xx......:::.:...x:.:x..x..:x.x... 93M1I28M2I44M 98/165 59.4% 168/94230402 0.0% 3/165 1.8% 119241234 70973321 +3047 chr4 + 190214555 168286008 168286007 168286070 63 AGGGAAGGAAGGATGGAGGGAGGAAGGAAGGAAAGAAAAAAGAAAAAGAAAGAAAGAAAGAAA chr4 + 94230402 29014675 29014674 29014737 29014675 29014674 29014737 63 AGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ..x......:xx..::...:..:::...::.:.::......:...:.........:..x.:.. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 139271333 50943222 +5808 chr4 + 190214555 168291738 168291737 168291870 133 GTACATTTACCATTTGTAATAAAGGCTTCATGTCCTCAGCCCAATGGGAAGTGATGACTCTAGCACAAGCTCTTTGAGAAAGAGGCAGATGGAGTAGAAAAACCACAGTGAGACAATGCAGTTTACACAAATC chr4 + 94230402 26077461 26077460 26077593 26077461 26077460 26077593 133 GTATACATACCATTTTTATTAAGGGTAAAACTTGTTCAGTCCAGCAGGATTTCATGATCCTAATCTGAGCTCTCTGAGAAAGAGGCATATGAAGAAGAAAAACCATTGTAAGACATTGCATTCTACAGAGGTC ...:.:x........x..x...:..:xxx.:x.x:....:...:::...xx.x....::...::x::......:.............x...:..x..........:x..:.....x....x.:....x.::.. 133M 92/133 69.2% 133/94230402 0.0% 0/133 0.0% 142214277 48000278 +4111 chr4 + 190214555 168293787 168293786 168293961 175 CTGTTGGATCTCAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTCAAAGATAATGAGCATGAAGTAACACAAAAGACACGCCGAATGTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTGT------------CAAAGAAAAAAA chr4 + 94230402 26078207 26078206 26078391 26078207 26078206 26078391 185 CTGATTGCTCTGGTTTTGCT--CCCAAGGAAGCATGTGCACTTTCCAGCGCGTCACTGTACAGTTTTAATCCTACTGCACAAGTAAGAACACAGATCACACGACGAATGTCAGAACCTTCGGGCCACAGCTTTTTCAACAGAAGGACAGTCTGGTAAACCTGCAATCACAAATTACaaaaaaaaaaa ...x.x.x...x:x...x..--..x:....:.xx.x.x:::..:.:.:x:x.:x.:x.....x.:.:..xxx..x..x:..x.x.:x......:.xx.....x...........x.....x.....x.x:.x.x.x.:....::x.......x..:x:....:------------....:....... 20M2D141M12I12M 111/173 64.2% 185/94230402 0.0% 14/173 8.1% 142215580 47998975 +3961 chr4 + 190214555 168297262 168297261 168297410 149 AGAAAGAAAAAGAAAGAAAGAAAGAGAGAGAGAGACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAG-----AAAGACAATA chr4 + 94230402 31013896 31013895 31014049 31013896 31013895 31014049 154 AAGAAGAAAAAGAAAGATAGAAAAAATAATTGAGTAGACAAAAGGAAAGATTTGTTGGAACTGAGGAAGTTAAAGAAATCATACAAAAACAAAGCAAAAAATGAA--GAGGACTGAAGGAAAAATAAGGCAAGTGAGAAAGACTTCAAAGACAATA .::..............x.....:.:x:.xx...xx..x.:..:......xxx:xx.:..xx:..:...--.......xx.x:x..:..x:..:x...:..x...--:.:..xx...:....:.x..:.x...x:......-----.......... 69M2I34M2D34M5I10M 99/147 67.3% 154/94230402 0.0% 9/147 6.1% 137283366 52931189 +3280 chr4 + 190214555 168297281 168297280 168297389 109 GAAAGAGAGAGAGAGACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGA chr4 + 94230402 78003581 78003580 78003689 78003581 78003580 78003689 109 GAAAGATATTGAAAAATGAAATCAGAGCAGCAAAAATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAAGTAAAAAACAGGGAAGGAATGAAACAGGAGAA ......x.xx..:.:.:....xx.:::x..x..:..x.xx.:.......:.x.:...:...:...x:.:.xxx.x...x..:...x.::...:...x....x..:.::. 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 90293700 NA +3106 chr4 + 190214555 168297309 168297308 168297390 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:...:.x:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 127185131 63029424 +3010 chr4 + 190214555 168297335 168297334 168297399 65 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 29014673 29014672 29014737 29014673 29014672 29014737 65 AAAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ....x:.:::..xx.x....:....::.:.::::.....:...:.............:..x.:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 139282662 50931893 +3698 chr4 + 190214555 168303842 168303841 168303924 83 CATGGTGGTGCATGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTCAAACCCAGGAGGCAGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::........:.--......::..........::........x.xx.x...x.:..::.......:..x:xx:..:...:. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 92270645 NA +11186 chr4 + 190214555 168306351 168306350 168306733 383 AAGAAATTGTCTTTTGGATGTGAATTACCTTCCAGGAAAAAATCTGGTGTCTGTACATGCTTGGAAGAAGGTATGCATAAAGGCAAAGAACATCAGATTCTTGCCCTGAGGAAAGTACAACGTTGACCTTCCTTGCCCAAGAATGAATGATTAAAA-AGTTGAAAAGCTGTGTTTGTAGATCGTTCAGGCCTTCGTCTGCAACTATCAGGAAATATGGGTAACTCTCTTCCAAGAAACTTCCCCACTCTTTTGATAAGCATCTCGAAAATGTTGTTCGAACATCAATGGTGGTATTCTTCTGAAGATGAAGAATTAAAGCAGTTCTCAAAGAAAGAAGTTCAGGGAAGTTGAAATACGCATACTCGGCATCCTGTGGAGGAGGA chr4 + 94230402 26079908 26079907 26080283 26079908 26079907 26080283 376 AAGAAGTTGTTTTT-------AATTTACCTTTTGAAAGAAGATTCTGTGTTTCCACATACTCTGAAGATGATATCCATAAACTCTAAGAGTGTCACATTCCTGTCCAAACGCTTGTACAACATTGATTTTCTTTGACAACGAATGAGCAATAAAAATAGTCAGATAGTTA-GTTTGGAGAGAGGTCAGTCCTATGTCAGATATGATGATGAAATAAGGATAGGATTTCTTCAGAAAAATCTCCCATTCTTGTGAAAAGCAATTGGAAAATTCTGTATGAATGGTGATGTTCGTGTTGTGCTTCAGATGTTCTACTAATGCAGTACGTAAGAAAAGAAACTGAGGATTCTGGAAGTACATCTGTTCTGCATCCTGTGGGAAAAAA .....:....:...-------:.x.......:::::.:..:..::x....:.x:....:..:x.....x.:...x......xx.x....:::...x....:..:..x:.x.xxx.......:....::...:...x.x.x......:::..x....-...:::.x..:.:-.....x...xx.x....x...x:...x.xx.:x..x.x......x..:..:xx:.::.:..::...x.::....:....x...x.....x:.x......x:...x:...::x::...x.x..:..x.x..xx.....xxxx.:...x.....x.x:..::......::.x...:xxx.x...:...::x.::..x...........:::.::. 14M7D135M1I13M1D213M 239/375 63.7% 376/94230402 0.0% 9/375 2.4% 142226443 47988112 +7227 chr4 + 190214555 168307980 168307979 168308224 245 AAAAAAGAACTCAACTATCATGTTACCTTGAAGAAAACTATGGTGAATTGTCCTCCTTTGCTAATAAGATCCACAAGATAGCGTTCAACCAGATAGAAGAAATGGAGGTTCTGCCCAGGCTTAAATGATAT-----CTCACAGATACATGTGATAAGTAATGAATCCCCATCAATCAAAAAAAATTCAGATTCAACAAAATCATTGAATAAACTGGAATATCTAAAATGAAAAACAGTTAAAACAAAAAT chr4 + 94230402 26080830 26080829 26081061 26080830 26080829 26081061 232 AACAAATAATGTAACTCATTCATTACCTTGAAGAAAACAATAATGTATTTTGCTCCTTTTTGAGTGAAATCATGCAGAAAGCATTCAATTAGGTA----AAATAGAG-------------TTAGATGTTGTACTTCCTCATTTAAGAACGTAAGAAGTAAGGAATCCCCATCTATTACAAAGAATTCAGACTCAACAAAGTCTTTTAACAGACTGACAAACCTGAAA-GAAAAGGAAATAGTACATACAT ..x...x..:x:....xx:x::................x..::..x...x.x.......x:x.:.:.:...xxxx...x...:.....::..:..----....:...-------------...:...x.:.-----....:xx.x:x.:..:.x......x...........x..:.x...:........:........:..x..x..:.:....:x.x.:..:...-.....:x.:x..:x...x.x.. 95M4D8M13D11M5I91M1D22M 158/227 69.6% 232/94230402 0.0% 23/227 10.1% 142227150 47987405 +3220 chr4 + 190214555 168316930 168316929 168317033 104 CACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGAAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAACTGAGATCAAGCCACTGCATTCC---AGCCTG chr4 + 94230402 76033207 76033206 76033312 76033207 76033206 76033312 106 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ...x....:.:...........::........x:xx:x...x.:........::.:..x:xx:..:..:..-:.xx...x::.....x:x..::.x..---...... 71M1D26M3I6M 68/103 66.0% 106/94230402 0.0% 4/103 3.9% 92283723 NA +3054 chr4 + 190214555 168317035 168317034 168317097 63 GCAAAAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAAAAGAA chr4 + 94230402 88382708 88382707 88382770 88382708 88382707 88382770 63 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAA .....:.........xx.x.........::.:..........:..::x:x....:x.x..x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 79934327 NA +3316 chr4 + 190214555 168333166 168333165 168333218 53 AAAAAAAAAAAAAAAAAAAAAAAAGAGTCAACAACAGCAAAAAGAAATGAGTA chr4 + 94230402 45034448 45034447 45034500 45034448 45034447 45034500 53 AAACAGAAAAAAAAAAAAAAAACAGAGTAAATAACAACAAAAAGGGATGTATA ...x.:................x.....x..:....:.......::...x:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 123298718 66915837 +7458 chr4 + 190214555 168335750 168335749 168335938 189 ATTTCTAAGCACTCAGCCCTCAGTCCTGGGGGT-GCTTCCCAGC---------CTGCTGCTGGAATTCCTGATCATGGCAGTCTGCTGAAACATGAGCTTAGTTACCAAATATAGCTGAGTGGAGTAAGAA----------------GACAGATGAGAGTCTGAGGCCACAGTTGCCTCAAAG-TGGCCATGGACCAGGCATTCTTTAATAAATAG chr4 + 94230402 26100946 26100945 26101161 26100946 26100945 26101161 216 ATTTCTAAGTAGTAAGTGCACAGAACTTTGTGTCACTTCCAGGCATAACGTTGCTTCTGCTGGAATTCCAGATAGTGGCAGCCTGCTGAAACATGAGTTCAGCTACCAAATATAGATGAGTGGGGTAAGAATTACATAGTCACACAGGACAGATGTAACGCACAAGCCACAGTCTTCTCAATGCTTACTGGGGACCAAGCAATCTTCGGAGAATAG .........:.x.x..:x.x...xx..xx.x..-:.....x:..---------..x.............x...x:......:...............:.:..:............x.......:.......----------------........x:.xx.xx.:........:x:.....x.-.x:.::x......:...x....:::x:..... 33M1I10M9I78M16I36M1I32M 142/189 75.1% 216/94230402 0.0% 27/189 14.3% 142234804 47979751 +3391 chr4 + 190214555 168363989 168363988 168364062 74 GTGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGCTGGGAGGACTGAATGAACCCAGGAGTTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.......::::.........:xx.x.:.x::xx.........:..:.xx:.....:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 92330785 NA +5083 chr4 + 190214555 168371634 168371633 168371774 141 TCAAGCAGTTGTGTTTATAGAAATTGAGCACATATGCATTTAGTGGCATTCTCCTTCCTCGGTTATCTAATTTCCATGGCCACAGCAGAGGAGCCTGAGTGCCACTAACACCGACTGTGCGCAGGATGACCTGAAGAAAGA chr4 + 94230402 26047775 26047774 26047915 26047775 26047774 26047915 141 TCAAGGAGCCATGCTTAAAAAAGTCTAGTGCATATGCATTGAGTGGCATGTCTCTTCCTTGATTATCATACTTCTTCAAATAAAGCAGAGGGCAGTTTGTGACATTAATTCCAAGGGAGCGTAGTACAGCCTGaaaaaaaa .....x..:::..:...x.:..:.:x..::..........x........x:::......:.:.....xx.:...:x:::x:.x........:xxx.xx...x..:...:x..:.xx.x...:..x.:::......:...:. 141M 90/141 63.8% 141/94230402 0.0% 0/141 0.0% 142323859 47890696 +6202 chr4 + 190214555 168379723 168379722 168379847 125 TACCTCTTTGATAAGGAGCTGCAAGGAAAACAAAAAGTAAAGTTTCAAAGTCTCCATGGCTCTTCGTCTCTTAAAAGACAGCAATGAATGCTTTAGCACTGACAACACCTATAAAAGAAGAGTAC chr4 + 94230402 26054276 26054275 26054400 26054276 26054275 26054400 125 TACCTCTTTGATAAGAAACTGCAAAGAAAACATAAAGTAAATCTTTAATATTCCAGCATATCTTTCTTTTTTGAATGACATCAGTGAGTGCTTCAGCACTGACAATGCCTAAACAAAAACAAAAC ...............:.:......:.......x........x:..:..x:.::.x:::xx....:x.:.:..:..x....x..:...:.....:...........::....x.x..:..x.:x.. 125M 90/125 72.0% 125/94230402 0.0% 0/125 0.0% 142325447 47889108 +3716 chr4 + 190214555 168384347 168384346 168384438 92 CATGGTGGTGTACACCTGTAGTCCCAGCTACTTGGGATGCTGAGATGGGAAGATCACTTGAGCCCAGGTGATTAAGGCTGCAGTAAACCATG chr4 + 94230402 76033197 76033196 76033286 76033197 76033196 76033286 90 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATG ..::......--...x......:...........::.x......x:xx.x::.x.......:.....:x.x..x:.....:..x.x.:x... 10M2D80M 64/90 71.1% 90/94230402 0.0% 2/90 2.2% 92351150 NA +10860 chr4 + 190214555 168384602 168384601 168384821 220 AGCACGGTACCTTTGCCTTGGCATCCTCTGGGTCATCTCCCTTGGAAGCCAGCAGCATGAGTCGCAGGACCAGGGTTATGCTGAGAGGGAACTGTCCTCTCAGCTCAGGAACACTGGATGCAAGGAGTCTTTTTATTTTGGGCAATGGGATATCAAAGAAATACACATTTCCAAGCAGGTCTTGACCTCTTCTTCCAGCACGACCAGACATCTGGAAGCA chr4 + 94230402 26055423 26055422 26055642 26055423 26055422 26055642 220 aatatGAAACCTTTGCTCTGGCATCCATTTTATCATCAGCCTTTGCAGCCAACAGCATGAGTCTCAGTATTAAGGAAATAGTCAGAGGAAACTGGCCTTTCAATTGAGGTACATTGGATTTGATAAGTCTTTCAACCTTGGGCAGTGGAATATCATAGAAGAACACATTTCCAATCATATCTTGACCCCGTCTTCCAGCACGCCCTGACATCTAAGAATA .::.:.:x........::........x:.xx:.....xx....x.x.....:...........x...x.::.:..xx..:x.x.....:.....x...:...::.x...x...:.....x::.x:.......:x.::.......:...:......x....:x............x..x:........:.x............x..x.......:::.::. 220M 159/220 72.3% 220/94230402 0.0% 0/220 0.0% 142329179 47885376 +5018 chr4 + 190214555 168394455 168394454 168394643 189 ATTTACCTACCCTAATAAGCCCTTTTACAAAGAGTATCTCAACAAACTCTTTTTCTTTAAAATACATGCTGCTGTGATGATATCCAATCCCCCTTTGTGCTAAAGCCTTCAGTTCTTTGCCGTGTCTTGTAAATCGCACTCGCGGTAATACCCTCTCCAAAGTCTAAAACAAGAAAGAAGTGTAAAACA chr4 + 94230402 26056872 26056871 26057060 26056872 26056871 26057060 189 ATTTTCCAACCTTGATATATCCCAGCCTGAAAAGCATCTCCACTGTTTGTCTTTCCTTCATGGCCATAGCTCCGTGATGATACCCAATGCCCCTCCGTGCCAGCGTTTGGTGCACATAACCTCTTCTCTGAAACCTAAGTCGATAAAAGATCTTCCTCAAAGTCTACAAATAAAAAGAAGTGTTAAACA ....x..x...:.:...x::..:xx:x::..:..:.....x..x:x:.x.:....:..x.x:xx...:x:x.:.........:.....x.....::....:.:x.::.xxx.:x.x.x:..x:x...:xx...:.xx.x...xx:x..x.:.:..::.........x..xx.:..........x..... 189M 114/189 60.3% 189/94230402 0.0% 0/189 0.0% 142337583 47876972 +4547 chr4 + 190214555 168403975 168403974 168404108 134 TACTTACAAAAAAAATATTGCAGGCAACTTATCCATTTGTCTTAACTTTTCAACAAGAAGAGGAAACATTTTCACCATATC---TTTTGAACTAGACAATGAATCCGGACTAAGGTTCTTCAGTACTCTTTTGACCT chr4 + 94230402 26061447 26061446 26061583 26061447 26061446 26061583 137 TACTTACATAAAAAATATGGCAGGCAATTTATCCATTTCATGCAATTTGTCAACAAAGCGTGCAAACCTCTTCCACTTCTCATATTCTGAGCAATCCACAGGTTGGGGTTTTAAGTTCTCCAGTACCTCATTCACCT ........x.........x........:..........xx:x:..:..x.......::x.x.x....x.:...xx.x.x..---..:...:.x.xx..xx.:x.xx..x:.x.:.....:......:::x..x.... 81M3I53M 92/134 68.7% 137/94230402 0.0% 3/134 2.2% 142342528 47872027 +3122 chr4 + 190214555 168404106 168404105 168404174 69 CCTACAACAGT--AAGTAAAAATTATTTAAAAAAAAAAAAAGAATTTGTGGAAACAGAAGAAAGAAAGGAA chr4 + 94230402 81220709 81220708 81220779 81220709 81220708 81220779 71 CCTATAGCATTCAAACTTCAAATCAGGCAAAAAAAAAAAAACAATTTATGTAAACAGAAGGGAGAAAAAAA ....:.:..x.--..x.xx....:.xx:.............x.....:..x.........::.....::.. 11M2I58M 52/69 75.4% 71/94230402 0.0% 2/69 2.9% 87183397 NA +6628 chr4 + 190214555 168405944 168405943 168406102 159 AATTACCTTCTTCACTTGGCCATTTTTAATCCAATTTGTCAATTCTGCCTTTAAGTTTTCTTCATATTTTCTAGCATCCAACTTCTTAATGACTATCTTATTCTTAAAAAGAATGAATTCCTCTGGACACAATTCCTTGGGGGGAAAATTATCACAAAA chr4 + 94230402 26062363 26062362 26062521 26062363 26062362 26062521 159 AGTTACCTTCTGTCTTTGTCCAACTGCAATCCAGTTGCTTAGTTCTTTCTTCAGTTCCTGTTCATATTTCCTCACATCCATCTTTTTTATCACTATATTATTCTTGAAAGAGACAAACTCCTCGGGATCCATCTCCTTGAAAACAACATTGTTATAAAA .:.........x:x:...x...x:.x:......:..xx.:.:....x:...:.:x.::.x.........:..x:......x...:..x..x.....x........:...:::.::..:.....x...:x..x:......::::x..x...:.:.:.... 159M 107/159 67.3% 159/94230402 0.0% 0/159 0.0% 142343581 47870974 +5726 chr4 + 190214555 168406589 168406588 168406749 161 TTTCTATATTTACCTGAGCCCTGGGCCAAGTTTCCCAGACTTGAGCCATGGTATCATAAAGCTGGATGCTTTCTTGAGGGGTGAGGGTAAGATCAGGTGGGAATCCATACTTTTCAATCTGTGAATAAACAAATTAATGGATGGATGAAGAAATAAAATTA chr4 + 94230402 26062575 26062574 26062735 26062575 26062574 26062735 161 TCTTTATACCCACCTGTGCCCTTGGCCACTTTTGCCAGACTTTTACCATTGTGTCATATAGCTGAATGCTCTCCCTTGGAGACAGGGAAAGATCTGAAGGAATACCATAGTTCTCAATCTGCAAGGAGTTTAAAAAGAGAAAGAAAGAAAGAAAATAATCA .:.:....:::.....x.....x.....xx...x........xx:....x..:.....x.....:.....:..::xx..:.xx....x......x.:x..:.xx.....x..:........::.:x.:x:x..xx.:x.:.x.:.x...::..x.x...:. 161M 106/161 65.8% 161/94230402 0.0% 0/161 0.0% 142344014 47870541 +6282 chr4 + 190214555 168415280 168415279 168415838 559 TAAAAGAATCAGTAAAGAAAGAAAAAGATTATCTATACATGCTGCAGTTCTATGAAGATTGAGTCCCTTTCCAGTTGCGATATACACTAAA-AATTCCACTAACAGGACAA---------------ATACACTTTT-----ATACTTACAATATCTGTCGTTAGCGCAGCACAGGGATGAAAATGATCAAAATAAACATCATCATGTTTTACTGAACATATATGCTTCTCTAAATCATTGTATCTCTCTCCACAGAGCACT----AGATACGAAGA-------GCAAGAATATCCAAATTAATGGACA------TACGATTATTAGA---ATATGGATTTAAAACACAAAAA-------TCCCTATAAAAAGCTTTGTAGTAAAATATAAAAATATATAGTAA-AACA------------------TAAAAAAAAT----AAGCTTACCAAGTCTAACTTCATATGA------TTGATTTTT--ATATGAATGGTCTTGGAGAAAGTTGAGACATTTGTCAGCCTGTTTTTCAGA---AATACATTTCTCTTCCATAATCTTGTCTGCCTGTTTCCAGTACTGTTTTACTGATTGCAGCCACCTTACAGAATAAAC---------ATGCATATAATTTAAATAAAATATA chr4 + 94230402 26062705 26062704 26063332 26062705 26062704 26063332 628 TAAAAAGAGAAAGAAAGAAAGAAAATAATCAGCT--------TGCAATCTTG----GATTCAATCTTGTTTAA--TGTAACATTTGAGAAACAATTTTGTCACCAGCACAATACTTAGATACTTAGATACACAATACAACAATACTTACATGATTGACTGTTAATGCAGCACATGGGTGAAAATGTTCGATGCCAAAATCACTGCCATTTACAGAGCACACATACTTCTCCAAATCATTGTATCTTTCTTCATACAGGACTGTGAAGAGACAAAAACGTAATGACACAATTGTTTGTTTTAAAAAATAAGTATGTACCATTGCAATATTTATTTTTATTTGAAACATATATAATGTATGTACATGCATATGTTCATGCAGTGTGATTAAAATGCTTGCAGAAAGGACACTACATTCATTTATTAGTTACAAAACATTCCAATACACACCTAGTCTAACACGGTATGACTTTTTTTGTTCTTTTACTGTAGATGTTCCT--------TTACATTTTCTTGCAAAATTCTTTTCAGAGTTGGTAGAGCTTCCTTTTATTGTATTATCAGCACACTGCCAATACCTTTTCACAGACTGTAACCATCTTCAAGAATAAAATAAAAGTTGTTAAAAATATTTTAAAGAAAATTTA .....::.xx.:x............x:..:.x..--------....:.::.:----....x.:..::x..:x.--..::.:..x::xx...-....:::::.x...x....---------------......xx.x-----.........xx..:x:::....::........x..:........x..:.x::x..x....::::xx.....x..:..:.:..:......:..............:...:..:.x..x...----...x..:..:.-------:..x:.x.:.:::xx....x::.:.------...x...::x.x.---..x.xx....:.....:.x.x.-------.x.x.::.x.x:x::x..:...:x:..xx...x::x.::..x..-:...------------------..x....x..----.x:.x:...x........x:x:.....------...x.:...--x.:.::...x..:.--------..:x:x:x.:.xx..:xx.x:........---::..x.x:.::...::..x:.x..:..x..x:::.x...:...:x...:..x..:..:.:...:...xx........x---------x.:x.x...x......x.....x.. 34M8D10M4D17M2D16M1I19M15I10M5I120M4I11M7I25M6I13M3I22M7I44M1I4M18I10M4I27M6I9M2I14M8D29M3I78M9I25M 338/537 62.9% 628/94230402 0.0% 113/537 21.0% 142352575 47861980 +7225 chr4 + 190214555 168416679 168416678 168416834 156 TACTTGGTGAGAAGATTTGGGTTATTTATGGTAGCTGAAAGAACCAAAAAGGGACATCGAATAATGACAAGGAGGAGCTCCCAAAATTTTGCTCCAACTTCTCTGCCAAGATAATGGACCTA-----GTAAAGAAAAAAAAATCAGTTGAAAAGTTGATGT chr4 + 94230402 26063813 26063812 26063973 26063813 26063812 26063973 161 TACTCAGTCAGGTGATCTGGATTACTGATAGTAGCGGAGAGAGCCAAAAATGGACATCGAATTGTTACCAGAAGATGCTCCCAAACCTCTGCTCCAATTTCACCACCAAGACAGTGAATCTATATTTTTGGGAAAAGAAAAATGATTTTAAAAATAAATGT ....::..x..:x...:...:...:.x..:.....x..:...:.......x...........x:.x..x..:..:x.........x:.:........:...x.::......:.:..:.:...-----x.::::...:......x.x..x....:.x:.... 122M5I34M 112/156 71.8% 161/94230402 0.0% 5/156 3.2% 142352866 47861689 +9839 chr4 + 190214555 168421752 168421751 168421941 190 AACACTACCTTTGCGGGTGCAACGTACACAACCACCCCGACATCGCTCTCCCTCAGCACTTTCTCCATGCAGTAGTAGGAAGCATAGGTTTTGCCTGAGGACGTTGGGGCAACAATCACTGCTGACTCATTCTTATCTACCACATCCAGGAGTTCCTGCTGCAGGGTACAAAGCACCATTTGTGTCAAGA chr4 + 94230402 26066629 26066628 26066816 26066629 26066628 26066816 188 AGCCTTACCTTTGTGGGAGCAACATACACAACTACTCCTTCATCACTCATTTTCAGAACTTTCTCCATGCAATAATATGAAGCATATGTTTTTCCTGATGATGTGGGAGCAACAATCACCGCAGACTCATTATTATCTACAGCATCGAGAAGTTCTCGCT--AAGAGAAGAGTAGTTATTTATGTCAAAA .:.x:........:...x.....:........:..:..xx....:...x:::....x..............:..:..x........x.....x.....x..:..x..:...........:..x........x........x:....x..:.....::...--.:.:x.x:.:xx:::....:......:. 160M2D28M 141/188 75.0% 188/94230402 0.0% 2/188 1.1% 142355123 47859432 +7876 chr4 + 190214555 168422517 168422516 168422740 224 TCATTACCTGCCATGCGTTGGGAATAAAATCCTGGACCCTGGGATCCCGATCTTTTCTTTCATCTCTTATCAAGTAATGGCCCATGTATTGCAGTTGAAACCGAGCTGGTCCAATGTCAATCGAATATTTCTTCTTATTTTTGTCATCTCCTATCTGTTATTTTAATATATTATTTGAAATCAACTTAAACTTCAAAATTGAATAAACATTTATTAAATATCCA chr4 + 94230402 26067765 26067764 26067979 26067765 26067764 26067979 215 TCAATACCTGCCATGTGTCTGGTATGAAATGTTGCACTCGGGGATCTGGATCGTTCCTCTCTTCTCTGAGCAAGTAATAGTCCATGTATTGCAGCTGAAAGCGAGCTGGTCCCACCTCAACATCATAGTTGCTTCTATTCTGATCATCTCTTCCTT----CTCTCATCTA-----TAAGGTCATATTAAATTTCAAGTTGGTTTGAAAACTAGCAAGAGATTCA ...x...........:..:x..x..:....x:..x..:.x......:x....x..:..:..x.....x.x........:.:.............:.....x...........x.:x....:xxx...x..x:.::....:.x:.......:.x::.----:.:.x..x..-----.:.::...xx.....:.....:x.x.xx.:..x.:.x::x.:.x..:.. 156M4D10M5D49M 148/215 68.8% 215/94230402 0.0% 9/215 4.2% 142354752 47859803 +6636 chr4 + 190214555 168427064 168427063 168427333 270 CCATACCTTCACCTCGGCAATGTTTTTTCCATGCTTTAAAGCAGGCAATTAATCCTAACATTTCAACTCCAAATTTCACTGAATTACTTGCACATGATGTCAAATAATCTTCCAATTTCCTTATTCCAGAATGTAAATTGTTCTTCATCTCCTCTTCAATAGAAAACAGCAGATCATCGTTTTGCTGAGCTTTGTTCTGATCTTCTTTGAGAAATGACTTTTTCTTACTCTTTTTGGTAATTTGGTGGGGTTTGGTATTCTGCTCAATAA chr4 + 94230402 26069901 26069900 26070170 26069901 26069900 26070170 270 CCATACCTTGTTTTCTGCAGTGTTTTTTCCACGCTTCGACACAGGCTGACAATGCTGACATTTCTACACTGAATTTCACAGATTTACTTTTAACTGTCTTGAGAAACTTTTCCATTTTATTTATTCCAACGGTCAGATTTGCTTTTATTTCCTTTTCTGTTGTTATCTGCAAGGTTTTCCATTGCTCCTCTTCTTTCTTTTCTTCTTTAGCTTTCAGTCGCCTGTTGTTTTCCTCTGCAATTATTTCCGCTTTGCTTTTCTATCCAATAA .........xx::..x...:...........:....::.x:.....x:x:...x..:.......x..x.::........x..x......x:.xx..x:x.x.:.x.x.:.....x...x:........:x:xx:.:...xx::..:..:....:...x:.x.xx.x.x...::x:x.:x:x.....xxx...:x....xx........::xxxx:::::x::.x..::.:.::.:x.:....xxx.xx.x....x.x....:::...... 270M 161/270 59.6% 270/94230402 0.0% 0/270 0.0% 142357163 47857392 +3045 chr4 + 190214555 168432236 168432235 168432283 48 TATATATTGTGTGTGTGTGTGTATATATATATACACACATATATGTAT chr4 + 94230402 6083165 6083164 6083212 6083165 6083164 6083212 48 TATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATAT .......x.............:::...:.:.x...:.:......:... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 162349071 27865484 +4546 chr4 + 190214555 168432439 168432438 168432585 147 TGGTTACAGAGCTCACCATCAACATGACATTTGATCCTGTCATAGTCGTCACTAAGGAGTCTTTGAGCATGCCAGTGCAAAAGTTCATCAGATGTCTTTTGTTTAAACAGTGAAGGAACAACCGGATCATCACTGTAAAAATAAATA chr4 + 94230402 26073314 26073313 26073460 26073314 26073313 26073460 147 TGTTTGCATTTCTTACCATCGGCATTGGACCGTACTCGTTCATATTCCTCAGACAGTGGTCTGCCAGAATGCCAGTGACGAAGCTCATCAAATTCTTTGTATTTAGCAAGTGAAGTAACTGCAGGATCATTGCTGAAACATTAAACA ..x..:..xxx..:......::...x:x.::xx.::.xx.....x..x...xxx..x:....x:x..x.........xx:...:......:..x::..x.:....:xx.......x...x:.x.......::...x..x.x....:. 147M 94/147 63.9% 147/94230402 0.0% 0/147 0.0% 142359125 47855430 +3181 chr4 + 190214555 168449609 168449608 168449680 72 GTATAATAAAAAAAAAAAAACATTAAAACAAAAAAAAAAAATGCAAAAAAAAAAAAAGAAAAAAGAAAAAAA chr4 + 94230402 52436505 52436504 52436576 52436505 52436504 52436576 72 GTGTCATACAGGAGAAAAACCACTGAAATCAGAAGAAGTGGGCCAAAAAAAAAAAAAGAAAAGAAAGAAGAA ..:.x...x.::.:.....x..:.:...:x.:..:..:x::xx...................:.:.:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 116013104 74201451 +10335 chr4 + 190214555 168461663 168461662 168462057 395 AAATCAGGAAAAAAATGAGTTATTAATGTCAATTACCTCCTTGGAAAAAGTTTGGTTTCTGTCTGTGCTTTCCATAGTATATGCATAAAATCTGAGAGTATCAGATTCATGCCCTGATGAAAGCACAACATTGACTTTCATTCCCCAGGAATGTATGATTAGGA-AGTTAAAAAGGTACGTTTGTAAATCACTCAGGCCTTCCTCTGAAACTATCAGAAAATACGGGTAATGCTGTTCCAAGAATAACTTCCAATCTTGTGATAAGCATCCAGAAAACTCCGTTTGCACATCAATGTTAGTATTGTGTTGAAGGTGGAGAATTAAAGCGGTCCTCAATGAAAGAAGTTCAGGAAAATCAAAATATGCATATTCAGCATCCTGTGGTGAGAAAAAGA chr4 + 94230402 26079899 26079898 26080287 26079899 26079898 26080287 389 AAATCAACAAAGAAGTT-GTTTTTAAT-----TTACCTTTTGAAAGAAGATTCTGTGTTTCCACATACTCTGAAGATGATATCCATAAACTCTAAGAGTGTCACATTCCTGTCCAAACGCTTGTACAACATTGATTTTCTTTGACAACGAATGAGCAATAAAAATAGTCAGATAGTTA-GTTTGGAGAGAGGTCAGTCCTATGTCAGATATGATGATGAAATAAGGATAGGATTTCTTCAGAAAAATCTCCCATTCTTGTGAAAAGCAATTGGAAAATTCTGTATGAATGGTGATGTTCGTGTTGTGCTTCAGATGTTCTACTAATGCAGTACGTAAGAAAAGAAACTGAGGATTCTGGAAGTACATCTGTTCTGCATCCTGTGGGAAAAAAAAGA ......:x...:..:.x-...x.....-----......::.x::.:..::..:x..x.:.x:x::.:..:.xx.x.xx....x......x...:.....:...x....x..:..x:.:.xxx.:..........:....x..xx.x.x.....x:::..x.::.-...:.:.x..x..-.....x.:.xx:x....x...x:x..x..x.:x..x.x:.....x..:..:x::.x:.:..::..x.x..:...x........x.....x:::.....:..:..x..x.::x::.....x..:.....:.xx..:..xxxx.:...x..:..x.x:..x:......::.x....xxx.x:..:..:::x.:...x...........x:.:....... 17M1D9M5D132M1I13M1D217M 245/388 63.1% 389/94230402 0.0% 8/388 2.1% 142381764 47832791 +3401 chr4 + 190214555 168470700 168470699 168470782 83 CATGGTGGCACGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGAGAGTAGAATCACTTGAACCTAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--....:.:...........::........xxxxxx...x..........:..:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 92437503 NA +3235 chr4 + 190214555 168475101 168475100 168475175 75 CTGGGTTGAATTCCTAATTCTACAACTAACTAGTTGTGTGGCCTGAGGCAAATTGCTTACCATCTCTGTTTCTGT chr4 + 94230402 54625277 54625276 54625351 54625277 54625276 54625351 75 CTGGGTTTTATTACTGACTCTGCTGATGAGTCATTCTGTAACCTGCGGCAAATTACTTACCACTTCTCTGCCTGT .......xx...x..:.:...:.x:x.:.x.x:..x...::....x........:.......::...x.x:.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 113849824 76364731 +5311 chr4 + 190214555 168488869 168488868 168489018 150 CACTGGGTCTGTGATATTTCTACAACAGGCTTTTTCAACACCTGTTAATCAGTCAATCAGAGGAAACCTCAGGGGCTGAAGATACGCCAGCTTGGTGGAAATTCCTTCCCAAAATAGCAATAGCTGAGCAAATTGCTAGGCTGACAGAAG chr4 + 94230402 26091950 26091949 26092095 26091950 26091949 26092095 146 CACCACGTCTGGAATATTTCTGCCACCACCTTTTTCAGCACCTGTCTGTTGGCCAATCAGAAAAAAGTAAAGGGCCTGAAGTCTCTCCAACTCCATGGAAACTCTTTCCAAAAATACTC----CCAAGCTAAGTGTCTCCCTAACAGAAG ...::x.....x:........:.x..x:x........:.......:x:.::.:........::...x:xx....x......x:x.x...:..:x:......:..:....x......x:x----.::...x..x..::xxx..:....... 119M4D27M 98/146 67.1% 146/94230402 0.0% 4/146 2.7% 142396919 47817636 +3988 chr4 + 190214555 168493649 168493648 168493731 83 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:...........::........x.xx.x...x.............:..x.xx:..:..:.. 10M2D71M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 92460452 NA +7797 chr4 + 190214555 168496832 168496831 168497106 275 CCAAAGTATAGAAGAATGTGTTTAAATCCTACGTTTATCAGATCCATAAATATAGTTCCTTCTATG-TTAAGTG-GCTTTATTTCTAAGAACCCAGCCCTCGGTCCTGGGGGT-GCTTCCCAGC---------CCGCTGCTGGAATTCCTGATCGTGGCAGTCTGCTGAAACATGAGCTCAGTTACCAAATATAGCTGAGTGGAGTAAG----------------AGGACAGATGAGAGTCTGAGGCCACAGTTGCCTCAAAG-TGACCACGGACCAGGCAGTCTCTAATGAATAGGCAAGGCC chr4 + 94230402 26100868 26100867 26101169 26100868 26100867 26101169 302 CTAAAATTCAGAATAATA-GTTTAAAGCA-GCCTTTACTGTGTTCATTTAAATATTCATTTAAATGATTAAGTTCTCTGAATTTCTAAGTAGTAAGTGCACAGAACTTTGTGTCACTTCCAGGCATAACGTTGCTTCTGCTGGAATTCCAGATAGTGGCAGCCTGCTGAAACATGAGTTCAGCTACCAAATATAGATGAGTGGGGTAAGAATTACATAGTCACACAGGACAGATGTAACGCACAAGCCACAGTCTTCTCAATGCTTACTGGGGACCAAGCAATCTTCGGAGAATAGCTGGAGCC .:...:.x:....x...:-.......x.x-:.x....:::x:.:...xx.x...x.:x:..xx...-......x-x..xx.........x.x:x..:x.x.:.xx..xx.x..-:.....x:..---------.:x.............x...x.......:...............:....:............x.......:.....----------------..........x:.xx.xx.:........:x:.....x.-.x..::x......:...:...::::x......x::::... 18M1D10M1D36M1I7M1I38M1I10M9I76M16I38M1I40M 192/273 70.3% 302/94230402 0.0% 31/273 11.4% 142395964 47818591 +3134 chr4 + 190214555 168499185 168499184 168499241 57 AAAAAAAAAAAAAAAAAAAAAAGGAAGGAAGAAAGAAAGGGAGACGGGGAAGAAGGA chr4 + 94230402 84536579 84536578 84536635 84536579 84536578 84536635 57 AAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAA ...:.......x..x.....x......x:.::..:.......:.x..:..:....:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 83962606 NA +18153 chr4 + 190214555 168511413 168511412 168512420 1008 TGTCTTTCAG-----AACACAGTTTCAGAAAACAGTTTCCAGTGCCTCTGGCCTTCCTACTGAAAGCAGACACAGAGTGCATGAAG-----------------ACCGTTCAAATATGTCAGGGACCTCCTC---CCATGAGTCCTTCTATGACTCCCTCTCAGACATGCAGGAAGAAAGCAAGAATACTGACTTCTTCCCGGGCCTTTCTGCTTTCCTCAGCCAGGAAGAGATAAACAAGAGTCTTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAACAGAAGATTTTGACTCGGAAAAGGAGATCTCGCAGATTTTCAGTACTTCTCCTGCAAGCCTCTGTGAACATCCTTCCCATAAGGAGACCAAATTGGGTGAAC---ACGCCTCGAGGAGACCTCAGGATAACAGGTCAACACC-TGTCCAGC--------CTCTGGCAGAGAAACAAACTAAGAGTA--TCTCTTCACCT------------------------GTTTCAAAGAGGAAACCTGCCATGTCACCCCTGCT---CACCAGGCCCAGCTACATCCGGAGCCTCCGAAAGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACAAACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAAGGCAGCTAATTTAATTGAGGAGCTAACATCCATATTTA---AAGCCGCAAAGCCAAGAAACAGAAGCCCAAATGGGGAGTCCTCGTCACCAGACAGTGGGTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCCTCAGCCAGCCAGAGCCCTATGGAAGACCAAGGGGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCAGGCATTGCTACCA--GGACAACCAGGACTTGGC------AGTGCCACACAACCGCAAG----TCTCACCCACAGCCCCA-CAGCGC-------------CCTCCACTTCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTGGAGTGTAGAGTCACTGGAAACCCCACTCCTCGAGTCAGGTATGAAT chr4 + 94230402 26104293 26104292 26105339 26104293 26104292 26105339 1047 TGTCTTCTAGCATGCAAGACAGAAGCTGTGGACAGT---CATTGCCTCTTTCTTTAATGCAGAAGG-AGACCTACTGTGCAGAGAGGGGCATCAAAAAGGGACATCCTAAAAAAATGTCAGAAGCTTCGTCACGCCATGACTTTTTCTATGGTTCCCTATCCGGCATACAGAATGGA------------GAATTTTCAAATGAACTTTCTGCCTTCCTTACCCAGGAGGAGATATGTAAGAGCCTTGACATAGCTCGGGAATCAATTGCCAATTCCATGAAGGAGGATCAGAATATAGCACCGGAGTTGACTCA---TTTCAATACTTCTAGTGC------TTCAGAGCATGCTTCTTTTCAGGATGCCAAACTTCATGAGCAAGATGCTTTACAGAGGTCTCAAGCAAGCAGTCTGACTTCATCTTCAGCAAGTCACATTCCTCCAGTGAATCAGA--AAGAACAATTCACCTCACCTAAAATGGCAAGTGGTTTTGTCACAGTCTCCAGGAAGCAAGAAAGCACCTCACCATTGCTAGCTGCTAGTCCCAGCTTTATTAGAAGCCTGAAACATTCAGGAAAGCGTGCTTCAGGTGTGCCCACCAC------GAAGTCTGAGTCAGCATCCCAGGGAGAAGTTCCTTTCAGGAACAAGCTGTGTGACAAAGCTGCCACATTCATTGAGGAACTGTCATCTATATTTAGAGAGGCAGCAAAGACAAGGGGCCGAAGTCCTGATGGGGA---CTCTTCTCCAGACAGTGGATACCTGTCACCGAAAAAGAAACAATCAACT---CTAAGTACCTCAAAGAACAAAGACTTTAACAAGCCACATCAAGAGACTGAGCCTGGGCCAAAATTATCT-------GGCGTTGATTTCAATGGAGAGCCCTGTTCTGAAAAGGAGAGCATCACACAGAGTGAAATGGTTCTTTGCCACCCTTTCATCAATGCAGAAGACAATCAGTCTTCAC----------CACCTCAGTTCACTCAAAAGCTCCGGAGTCAGGAAGTTGCTGAAGGAAACAAAGTATTACTGGAGTGCAGAGTTGCTGGCAACCCAGTCCCTGATGTCAGGTAAGTAT ......::..-----..x....xxx.x.x::.....---..x.......xx.:..xx.:.x...:.-....x:.xx.....x::..-----------------.:.x.xx...x.......:::.:..x..---......x.::.......::.....x..x.:...:...:.x.:.------------..x..:.:xxxx.:x........:.....:.x......:......x::.....:......x.:..:...::.x.x..x...:.:...:x:.x:..:...:xx:.:x::.x.xx....x.xx.x..---.....:.......xx...------:.xx..:...x....::x.x....x:.....:.xx:...:.---.:..:.::x:...::....:.xx.:...x:::..x:.-.x.:....--------:..:xx...x...x..:.--....::.--..x.:......------------------------..:..x.:..:.x..xxx:x..:x.....x:....---::.:..x.......x:..:x.:.....xx:.x.xx.x.:........x.x..::x::x....x...------:...:.::.:x.:x..:x:..::..:.:.x.xx:::.x:..:.x.............:..x..:.xx..x........:..:x....:.......---.:..x......x....:::.x....:..x:.......---...x..x...........:........x..x.....xx.:.x:...:.:---..:...:.....:xx.:.x.:::.::..xx:.:xxx..xx::....:x..:xxx.:.x:x..:.:x:..-------...:...x.x:..--...x.:..xx.x::..:x------..:::......:xxxx..:----...:xx....xx:::..-..::..-------------:..:...----------......::....::........xx....:..:.....x..x.....:.:.x:...x.xx........:.....::....x.....x:::...x:x........x.x.. 10M5I21M3D27M1D19M17I28M3I43M12D125M3D18M6D41M3I37M1I8M8I18M2D7M2I11M24I35M3I66M6D95M3I37M3D49M3D69M7D13M2I18M6I19M4I17M1I6M13I7M10D108M 608/952 63.9% 1047/94230402 0.0% 151/952 15.9% 142407120 47807435 +3265 chr4 + 190214555 168513977 168513976 168514048 72 GTGCCTGTAATTCCAGCTACTCAAGAGGCTGAGGCACAAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:...........::.:........x.x::x...x..........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 92480771 NA +3090 chr4 + 190214555 168542733 168542732 168542775 43 TATATATATATATATATATATATATATATATGGAGAGAAAGAG chr4 + 94230402 27005996 27005995 27006038 27005996 27005995 27006038 43 TATATATATATTTATATATCTATATGTATTTGGAGAGAGAGAG ...........x.......x.....:...x........:.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 141536737 48677818 +3584 chr4 + 190214555 168545400 168545399 168545471 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 92512194 NA +3019 chr4 + 190214555 168553690 168553689 168553737 48 TTGTTGTTGTTGTTGTTGTTGGCCTTGCTTTGTTTTTTTGGACTGTTT chr4 + 94230402 63215016 63215015 63215063 63215016 63215015 63215063 48 TTGTTGTTTTTGTTGTTGTTTGTTTTGTTTTGTTTTTTAGGATGATTT ........x...........x.::...:..........x...:x:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 105338674 84875881 +8027 chr4 + 190214555 168565846 168565845 168566251 406 TTTTTTAATGCTC-----CATGAAATTTTATAGCCTTGAGAAAATTTTGA--------CTTCTAAATCTAGCCAAATAATGCTAGTGGCTGTTGCAGAATTAGTGTGTTTTG---------TGTTATATAATGGTGTGGATTTTTTTTTC-------TTCCTTAAAATACTCTTAGAAC--TTTTGACCTGTCCTGTGACTGAATTCTGGATA----------CTATTGGTTA-----TAATAGTGCAAAACAGGTCAGAGATAACATAGGATAA-ATAATATAGTCTCTTAGCACTTAGCCAATCTCTTTGGCCATCATCCCA--CAGAAAATATTCTTCAGGAGTGCTAAGGTATCAGTTA--TTAGAAAGTAATCTATTTTTAGAAACACCAAACTCAGCTTACCTTCTTTTCTAGATTTAGACC-TTGTTTTAAAGAATACAATTCTTTCAGTT chr4 + 94230402 26121444 26121443 26121889 26121444 26121443 26121889 446 TTTTCTAATTTTCTGCATCATGAAACCTTATA-CCCTGAGAACCCTTTGAGGGTAGTCATCACAGATCTAACAGAATACTTTTGATTTTTATCACAGCATGAAGGCAAAATGAAGAAATGCTGAGATTCAATGATGT-----TTTCCTTCGGAGTAGTACTTAAAAATACCAGTGGAAAAATGTTGACCTGTTTTAGGGCCAAATATTGGTTAGAAAGGAAGTATTTTGATTACATTGTAATAACATGAAATATAGCATAGATAATGAAAGGCAAGAGGATAAAGTCTCTTA----CTATATAATCTTTTTGGTCATCAGCCAGAGCAGGAAATTTTCCTTGGGAGAGTGAAGGTATCAAGTAACTTGAAAAGTAATATATTTTTAGAGACACTAGCTTCATTTCACACTGCTTTCTAGAATTAGATTGTCACCTCAAAGA--ACAGTCTTTTTATTT ....:....x:..-----.......::.....-..:......xx:.....--------x.:x:.:.....:.x:....x.x:.::.xx:.:.::...x..x.:x.::xxx..---------..xx..x:....:...-----...::...-------.x.:.x.......:xx.:...x--.x.........::.:x.:.::...x:...x..----------x.x...:...-----.....:::::...:.x:x..x......::x.:.::..-.x:...x.........----:..xx:.....:.....:.....x..x:--...:....x...:.::....x.:x.........:x..--..::........x..........:....:.:x:...x:.:..x:.x:........x.....::-.::::.:.....--...:.::...:.x.. 13M5I14M1D17M8I54M9I16M5D8M7I22M2I32M10I10M5I37M1I16M4D28M2I37M2I63M1I12M2D15M 262/394 66.5% 446/94230402 0.0% 64/394 16.2% 142444402 47770153 +3352 chr4 + 190214555 168567532 168567531 168567623 92 AAGAAAATGTGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAGATATATATATTATACATTATATATAATATATATAATATACACACATGTA chr4 + 94230402 72321883 72321882 72321969 72321883 72321882 72321969 87 AAGAATA-GTGCTGTGTTAATGTGTGTGTGTGTGTGTATACATATATATCTGATCTACAT----TTTAATATATATTTCAGAAAAAAATGTA .....x.-...x.....xx:...................::.x......x.:x.x.....----.x..........xx:.x.x.x.x..... 7M1D52M4D28M 67/87 77.0% 87/94230402 0.0% 5/87 5.7% 96245649 93968906 +9012 chr4 + 190214555 168569108 168569107 168569504 397 AAAAATATCTCCTTTACCTGCCTTGGTGAGCATCTTATCAGCAAGCACATTAACTCAAACAATAGCTACTCTTATCTGCAGAGGACAGGTTCAGGCTCATTAGTGAAGTGAACTGGCAGCCACTCCCCTCTACATAGCAACTGGAGCAAATATTGTTCCAGCC-CGCCAAGTGACCAATGAGA----------ACTGAGATAGTGCCGTGGAATCTTTTCAATACGAGTAGTGTTAGTGTGAACAACCTCTCTTTGACTCTCATTCGCCTTCTCATTTAATCCTACCATTTCAAGAGAATGATCTCATCTACAGACTGTAAATACTTGGGGACTTTTATGAAGGGAAAATATTACAAAGGGCTGAAGTTTGCTTCAAGAACAACTTAG--GTAGGCACTTCAGTTTAATT chr4 + 94230402 26124251 26124250 26124634 26124251 26124250 26124634 384 AAAACTATCAGTTTTAGGTG---TGGAGATTAATTTATTGGCACAT---TTTATTCAAACAATAACCATCCTTTCAAGCAGAA-CTAGGTTCAGTCCCGTTAGTGGGCTGAATTGGCAATGACTTTTCTCTACCTACCAAAC--AGCAGATATTGTTCCAGTGGTGCACAGTAGCCAATGAGATGCAGGGCATACTGAGACACCCTTGC-------TTGCACCAACAGCACTGT-ACTGT-AATTCCTTCTCCTGACAACCTCCTCCCCTTTTCACT-GACGCTAACATTTTTAGAGTATGATCTCATCTGCAAATTGTAAATCCTT-GGCCCTGTTTTAAAAGGAAAGTATTGCAAAGTGTTGAGA--CGCCTCACGAATAATTTAGTAGGAAGCATT----TTTAATT ....x....xx:....xx..---...x..x:.x:....::...x::---..x.:..........:.:.::...x:xx.....:-x:........x.:.:......::x....:.....::x...:::......x..x...x:--....:............:x-:..xx...::.........----------.......:.x:x::.:-------..x..x:.xx..:.x...-.x...-..:xx.:....:.x:xxx.::x:..x....:...:.-:.:x...x.....:x....x............:..:.:.......x...-..xx..x..x.:..:.....:....:.....x.:...::--:..:...x...:..:....--.x.:...:.----....... 20M3D23M3D34M1D58M2D19M1I19M10I16M7D18M1D5M1D36M1D49M1D39M2D19M2I9M4D7M 254/371 68.5% 384/94230402 0.0% 39/371 10.5% 142444857 47769698 +3718 chr4 + 190214555 168592842 168592841 168592902 61 ACAAGCCCTACAGGACCAAACTTGAAGAGGAATCTAGGTCATTGTCCTGACAGATCTGAGC chr4 + 94230402 89191416 89191415 89191476 89191416 89191415 89191476 61 ACAGGCTCTGCAGGACTGAACTTGATGAGGAACTTGGGGCTTTGCCCTGACAGCTCTAAGC ...:..:..:......::.......x......::.:..x.x...:........x...:... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 79401426 NA +3049 chr4 + 190214555 168595920 168595919 168595985 66 TGAACCTGAAATAAAAATTGAAAAGGAAAAAAAAAAAAAAACAGAATACCCAACTTTCAATTATGA chr4 + 94230402 91067968 91067967 91068033 91067968 91067967 91068033 66 TGCAACTACATTAAAAATTGAAAAGAAAAAGAAAAAAAAAAAAGAACCTGTGGATTTTAATTGTAA ..x.x..:x.x..............:....:..........x....:x:x:::x...:....:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 77527952 NA +3866 chr4 + 190214555 168599959 168599958 168600059 101 TATTGTATACACACACATATATACATACATGTGTATACACACACGTA------------------------------TATACATACATGTGTGTACACACACATACATACATGTGTATACACACATATATA chr4 + 94230402 68837019 68837018 68837149 68837019 68837018 68837149 131 TACAGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA ..:x..x:.:::::.:...:..........::x..:.........:.------------------------------.:.:.:.:::..............x..........::::..:.......x.x.. 47M30I54M 71/101 70.3% 131/94230402 0.0% 30/101 29.7% 99762940 90451615 +3132 chr4 + 190214555 168599988 168599987 168600062 75 TGTGTATACACACACGTATATACATACATGTGTGTACACACACATACATACATGTGTATACACACATATATACAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.::::::::..:.:.::..xx....:x.:.:...:.::..x........x...:........:.:.... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 82765447 NA +3043 chr4 + 190214555 168600035 168600034 168600092 58 ATACATGTGTATACACACATATATACATACATGTGTATACACACACATATATACATGC chr4 + 94230402 42936212 42936211 42936269 42936212 42936211 42936269 58 ATGCATGTATATACATACCTACATACATATGCAGGTGTGCACACAGATACGCATATGC ..:.....:......:..x..:.......::::x..:.:......x...:::.:.... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 125663823 64550732 +3286 chr4 + 190214555 168600077 168600076 168600155 79 ACACATATATACATGCATGTGTATGCACACATATATATACATACATGTGTATACACACATATATACATATACACTATAT chr4 + 94230402 30232994 30232993 30233069 30232994 30232993 30233069 76 ATGCATTTTTATATACA---GTATGCACATATACATATACATGTGTGCGCATGTACACAGACATGTTTATGAACTACAT .::...x.x..:..:..---.........:...:........:::..:.:..::.....x.:..::x...:x....:.. 17M3D59M 53/76 69.7% 76/94230402 0.0% 3/76 3.9% 138367083 51847472 +16871 chr4 + 190214555 168634341 168634340 168634866 526 TGGTGGGGCTAATGGATACAGTGGTTTTTCTGTAAATGTAATTAAACGTGCCTCTGCCAGCTGCCTGTGGTATTTGTGAATGTTTTCGTAAGAAAAGCTGTTCTTCGACTTTATCTGCCCACTGTGGTTTGTGGCATGTTGTGCT-----ATTCTGCAGCC-TTGCAGTTTTTTT-------CCTGAATGATTGGGCTATGATGTCA--TGTGCTATCTCAGCGCAGAACCTTTTCAAAG--------CTTTGCTGGGGTCTGTGTGCCTGA-GCGAGGGGAGTGGAGGCTCCCTCAGAGCGCACTTGGTAGCGACTCCCCGTCTACTCCAGCACATTCCATCGCCTGGAGACCAAAGCCACCAAATGATTTGCGGTCAGAGTGATTTGGGGCTGGTTAGAGATGATTTAAAAGGAAGGTTATGGGCATA-TGAAGTGTAGCGTA-AAGAAAATA--------TATTTTACTACTTTATTGAGACCACATGGCTCCAACTTGAACTTTTTTTTTAAACATGGAAATTGTTGGCTGAACTGGCTCACAGTGTTTTTTCCCT chr4 + 94230402 26150156 26150155 26150690 26150156 26150155 26150690 535 TGGCTAGCTTAATGAATTCAATA-CCTCTCTCCGAATACAATTACACGTGTATCTGCCAGCTGCTTGTGGTATCT----CTGCTTCAGCAAGAAAAGCTGTTCTGTGGCTGTACTGGCTCGCTGTGGTTTGTGGCTTACAGCTCTGATTTATTAGGCAGTAGTTGCATTTTTTTCTATTTTCCTTGAATGATTCAACTGTGATGTCACTTTTTTTGTCTTGGCTTTCA--CCTTTTAAAGAATGGTTTTTTTCCTGCAGACAATTCTTGTAACACTAGGGATGTGGGAGATGTCCCAACGTTCATTGCAGAGCAACTCT--GTCTACCCCAGCACATTCCA--------------GGGCCACCGAATCATTTGTGGTGAGAGTGATTCAGATCTGGTTA-AGATGATTTAAAAGAGAGGTTATAGGCATACTGCAGCTCTGCATTTACGAACATAACAGGGAGTTTTTTACTGCCTGATTGAGACCACATGGCTCCAACTTAGACTTTTTTTTT-AACGTGGAAGTTGTTGGCTGAATGTACTCAAACAGTTTTTTTTCT ...:x:.x:.....:..x..:.:-::.:...x::...::.....x.....:x............:........:.----x..:..:x.:...............x:.:..x..::x..:.:..............x.::x.:x..-----...xx....:x-.....x......:-------.:.........x::..:........--.x.x:.:...::..x:xx.--.:...:....--------:...x...x:.x.x:.x:x:x.:.-:.x....:x....::.x.x:.:..:x.:x..:.xx:x...:....:--......:.............--------------::......:...x.....:...x.........::.:x.......-..............::.......:......-..x..:x:x..:.x-.x...x...--------.x.......:.:.x........................::...........-...:.....:............:xx:....x.xx.......::.. 23M1D51M4D66M5I11M1I13M7I25M2I19M2D10M8I24M1I46M2D20M14D44M1D30M1I14M1I9M8I51M1D45M 362/501 72.3% 535/94230402 0.0% 59/501 11.8% 142484185 47730370 +3078 chr4 + 190214555 168651935 168651934 168651977 43 TTAGTTTTTTTGTATTTGTTTGTTTGCTTTGTTTTTGTTTTGG chr4 + 94230402 62526016 62526015 62526058 62526016 62526015 62526058 43 TTGGTTTTTTTTTGTTTGTTTGTTTGTTTTAGTTTTGTTTTGG ..:........x.:............:...:x........... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 106125919 84088636 +12219 chr4 + 190214555 168668153 168668152 168668378 226 TTTCCCTCCTATCCTTTGACCTCCATTTGGCCTGCAGATGGTTCTGTGAAGGGAAAGAACTGCACAACACTCCTGATATTCAAATCCACTGTGAGGGAGGGGACCTCCATACCCTGATCATAGCAGAGGCCTTTGAGGACGACACAGGTCGCTACACCTGTTTGGCTACGAATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGTTCATTGAAGGTAAGGAGGG chr4 + 94230402 26165050 26165049 26165275 26165050 26165049 26165275 226 TTTCTCTTTTGTCTTTCTAAATGCGTGTGGGCTACAGATGGTTCTGTGAAGGAAAAGAACTCCAGAATTCCCCTGACATTCAAATCCATTCTGGAAGTGGAGGACTTCATTCACTAATTATAGCAGAAGCCTTTGAAGACGATACTGGACGCTATACTTGTCTGGCTTCAAATTCCCTCGGTTCAGATAGTACATCAGCTGAAATATTCATTGAAGGTAAGAGGGG ....:..::.:..:..:x.xx.x.:.x...x..:..................:........x..x..:x.:.....:...........:.x..:::.x..:.:x..:...x.x..:..:........:........:.....:..x..x.....:..:...:.....x.:...:..xx...:.....:.xx.....x.....::.:...............::... 226M 168/226 74.3% 226/94230402 0.0% 0/226 0.0% 142503103 47711452 +3043 chr4 + 190214555 168670729 168670728 168670790 62 GACTCCGTCTCAAAAAAACAAAAAAAACAAAAAAAACAAAAAAAAACAAAAAAAAAAAAACA chr4 + 94230402 29605809 29605808 29605870 29605809 29605808 29605870 62 GACTCCCCTTCACAGACACAGCCAAAGCAAAACAAACTAACAAAAAAAAAAAAAAAAAACCA ......x::...x.:.x...:xx...:.....x....x..x.....x............x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 139064920 51149635 +3765 chr4 + 190214555 168675916 168675915 168675998 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGTGGGAGGGTCACTTGAGCCCAGCAGGTCAAGGCAGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:...........:.........x:xx.x.::x.......:.....x..x.:x:...x.x.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 92642719 NA +6462 chr4 + 190214555 168681323 168681322 168681432 110 CTTTCCCAGGTGCCAGTTCAACAGATTCTGACAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAGCTATGCCACAGTAAGTGCCTACAATTCCATCGATTATGTGGAAA chr4 + 94230402 26167909 26167908 26168018 26167909 26167908 26168018 110 CTTTTCCAGGTGCCAGTTCCACAGATTCAGAGAGTGAAAGTTTGATTTTCAAATCAAAATCTGGAGCTATGCCACAGTAAGTGGGCAAAATAGAACTAATGATGTTCAAA ....:..............x........x..x...........:::...........:.x.......................xx:.x...xxx.:::..x....xx... 110M 88/110 80.0% 110/94230402 0.0% 0/110 0.0% 142513414 47701141 +6832 chr4 + 190214555 168682984 168682983 168683106 123 TTCCTATTTTCCAGAGCTCAAAAGAAAACAACTTCTGTTTCCTTGACAATAGGATCATCATCTCCAAAGACAGGGGTGACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTGCAACAGGTA chr4 + 94230402 26168602 26168601 26168724 26168602 26168601 26168724 123 TTTTTCTTTCTCAGAGCCCAGAAGAAAACCACCTCTGTTTCCCTGACAATAGGATCTTCTTCACCAAAGTCTGGAGTCACCACAGCTGTAATACAACCCATCTCTGTGCCCAGTCAGCAGGTA ..::.x...::......:..:........x..:.........:.............x..x..x......x.x..:..x...........:..x.....xx.x.....x..::xx..:...... 123M 95/123 77.2% 123/94230402 0.0% 0/123 0.0% 142514382 47700173 +3384 chr4 + 190214555 168685478 168685477 168685564 87 TTTGCAGGTTCACAGTCCAACTTCATATCTCTGCCGACCTGATGGAACCACTACTGCCTACTTTCCTCCTGTTTTTACAAAGGTCTG chr4 + 94230402 26168851 26168850 26168937 26168851 26168850 26168937 87 TTTGCAGGTCCAAAGCCCTACTTCATACCTGCACCACCTGGATGGATCTAAGCCTATCAATTCTGCACTCATTTTTACTAAGGTATG .........:..x..:..x........:..x::..:x.:x......x.:.xxx..::.x.:.:.x.x.:::.......x.....x.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 142516627 47697928 +9488 chr4 + 190214555 168690596 168690595 168691624 1029 ATTTCAGGAACTGCAAAACACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTCCGAATTCTACAGAAAAGTAAGGAGAAGTGCCCATGTCCCCAAATCTGACCATTTTATTCTCTCCAGCTTCAAGAAAACCAAGAAGGGCTAAGTCATTAAGATGAATTGATCTCTATGTTCAAAGAGTGGCAGGATCAGATAATCTACAGTGTGTTGAAATCCAGTAAATGGAAACTATGACCCCCTTGACACTCTAATGAAAGTCATATATTCTTTCGTCTTAAAAAATGCATATA-TACATTTGTACTCAAATTTGCATGA--ATAATTTTAGGAGGTTTACCAGGCTCCTAGAGCCCATCTATGAACTGCAGTTGGAAAAATTTCTTAGTGTAAGTTGATACAGGAATTTGAGTTTTTATATTTATAGAAATATAAACCGATCTATCACTTTATATCTTTTGTATGATGGAGTTTGACTGTAACATTTCTTCAGACATGTCCTAGACAAGGTAATGGAAAGGAACAAGTAGGTTTTTTTTAATTAAATGGAACCCCATTCTAATACT-TTGTTCTAATTTA-------TTTTTTTCATGTGGCAAACAGAACCTAGATCTACAGCTGAACCTGGTAAGAATATTTTTAGGGTTTTTTTTTTTGGTGGTGGGGGAGCAGATAATGTATCTTTTGGGTCTCAATAGTTCTTTCTTTCTACCTTAAAGCCGTAAGCAGAACAATGTTTTTGTGGCTCCCTGGAAATGTGAAACCCCCTTAAAAACAATATCTTCTTTATCA-----TGGAGTCTGTACACTGCATTTTACATCAACGTCTTTATTAGCAAAACATTAAGTTCCATTCAGACAAGAAGGTCAAGCTCAGTGACTTCATGCTTTTTAAAATACAGTCTTTTAGGCTCAGAAAGCAAA------CTAAGCT---GATGATGAAAAAACATCCTCCTAAAATTCCA chr4 + 94230402 26171171 26171170 26171963 26171171 26171170 26171963 793 ATTTCAGGAGCTACAAAACTCCACAGCATCTGAGGGACAAGTAGTGGTATTGGAATGCAGGGTGAGAGGACCCCCTCCCATTCATGTTAAGTGGTTTCGACAGGGCATTGAAATTCAAGATTCTCCAGACTTCAGAATTCTCCAAAAAAGTAAGG--------CAATGACTGAAGA---GGCCACTT-----------------------------------------TTGATATG----GGACACCTTG----------GGGAGGGTGGAATAA----------------------------------------------------TAATGAAATTTATTT-------------------TGGATAGAGTCCACTCTTCCTCACCTTTCAGTGATTATAAT-------GGCTAA--AGGCT-----------------------AGTAGTAATAATTGACTACTGCTA-TCAATGCA--ACCTTTAG---TCATATTTATTT---TGTAA-------TGTTTCTGCAAAGGTTCTGTA--------CTTGTCTACAAGATTTC--AGTACGTGTTC--------------------ATTCGGTATACTGTTGTTTATTAGCATAATC-----TCTAACATTATTTTTCTTGTTTGTTTCCCCTTTTTATGATGTGATGTGCAGAGCCACGATCTGCAACTGAACCTGGTAAGAATCATAT------------------------------AAAAAATGTCTCTT----GATTCACTAGCTCTTTGAGTTTGTATAGAAGCTGTAAATATAAAAAGATTTCTGCTGAGCATTGGTAATATGAAACCCCCTTAAAGACAATGT-TTCTTTATCACACCTTCCATACTCTACACTGGGCTTTACATCAATTCCTTTATAAGTTAAACAGTAAATTCCATTTAGACCAGTAAGGAGAGCCTCACAGC-CAAAACTTTTGAGCAAG-----TTTTATTCTCAGAAAATGAGTAATTTCCATGCTACAGAGGATGAAAAAAGTATCCCACAAAGTTCTA .........:..:......x.x:.x.::x.x..:..x..:..:.....x:....:...x....xx.x..:x.x..:..:x.x..x..:x..........:..:..x.x......:.....:........:...x.......x..:..........--------.x...x.:xx.:.---.:...:..-----------------------------------------..:.x...----.:x.x.:x..----------..x...:.x::....----------------------------------------------------........x.:..x.-------------------..x...x.-.x..:.:x.x....xx...xx:...--.....-------..:.x.--.....-----------------------...x.x..x....xx:..x..:x.-.::..:..--.x:..x..---.:........xx---.:...-------.:.:x..x:.x.xx..:....--------:...x..::..x.....--x:x..:...:.--------------------.x:x:...x::.x..x..x....:xxx:.x.-----.....:.:.-..x....x:...:-------.....x.x.....:::x:....:..xx.....:..:.................xx.x.------------------------------.:.x.....x....----.x:...x...:.....xxx.:.::x.x:....:....::.x..x..x:...:..:x.xx.x:...x...:...............:.....:.-..........-----.xx.xx..x.......x::..........:x:......x..:x.....x...:.......:....x..x.:.xx:...::x::::.-:x.x:.....x.:x.x:-----.....xx........:::.:------.:.x...---..x..........xxx:.:.x:...:...:. 155M8D13M3D8M41D8M4D10M10D15M52D15M19D8M1I25M2I5M7D6M2D5M23D24M1D8M2D8M3D12M3D5M7D21M8D17M2D11M20D31M5D9M1I13M7I58M30D14M4D93M1D10M5I86M1D17M5D20M6I7M3I31M 524/768 68.2% 793/94230402 0.0% 286/768 37.2% 142519425 47695130 +15833 chr4 + 190214555 168694746 168694745 168695076 331 CTGATGTGTTTTACACTCCCCTCTCTGTCTAGACAGAAGTCAGCTTGCATCACAAATCTTTTCAGACTGTTTTGTGAATTAATAGCTAGTCAGCTTACTTAAGACCAACAT--CCGTTTGTCATAGTACCTTCTCTG----GCCTTCTTTGAAATTCTGACTTTGTACTGATAGACTCCTTCAAAG-ACTA---GTCTGGGGGTGGGGGACACAGAAGACTCATTTGACAGCTGTTAATACTCAGTCTCTTACTCACTCAGCTGTCTGGAAACAGCCACAAACTGTGTTGAGTTACTTCTATAGCACT-GTCTAATAGCGTGCAAAATTAAAAACACAAAAA chr4 + 94230402 26173658 26173657 26173995 26173658 26173657 26173995 338 CTAATGTATTTTACACTCTTCATTCTGTCTAGACAGAAATCAGTTTGCATCACAAATCCCTGCAGACTGCTTTGTGAATTAATAGTTAGTCAGATTACTTAAAGCCAACACCGCAGTTTGTCTCATTACCTGCTCTGTACTTCTTTCTTTGACATTCTGACTTCATACTGATTGAATCCTCCAAAGAACTGGCTGCCTGAGAATGAAATAGCCTATGGAATCGTTTGCCAGCTGTTGATATTTTGACCATT----ACTCAGCTGTCTGGAGTCAGCCGCAAACTGTATTGAATTACATTTAAAACAATGGTCTGATGGCATGTAAGAAGAAAACTATATGAA ..:....:..........::.x:...............:....:..............::.x.......:...............:.......x........::......:--.x.......x:.x.....x.....----x.:........x..........::.......x..x....:.....-...:---.:...:.::..:::x.xx.x:x:..x..:....x........:...:.:x.x.:x..----...............:x.....:........:....:....x.:..x.:..x.-....:..:..:..:..:.xx....x:.:.x:.. 111M2I24M4I45M1I4M3I57M4D53M1I33M 250/327 76.5% 338/94230402 0.0% 15/327 4.6% 142521088 47693467 +3478 chr4 + 190214555 168696077 168696076 168696155 79 AATTTATGTTGGGCCACATTCAAAGCTGTCCTGGGCCACATGTGGCTCAGAGGCCACGGGTTGGACAAGCTTGCTCTAG chr4 + 94230402 45575675 45575674 45575751 45575675 45575674 45575751 77 aatttaggttG--CCAAATTGCAAGCTGTGCTGGGCCTCATGTGGTCTGTGGATCATGGGTTGGATATGCCTGCAGTAG ......x....--...x...xx.......x.......x.......::::x:.::..:........:.x..:...xx... 11M2D66M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 123120402 67094153 +3888 chr4 + 190214555 168702423 168702422 168702496 74 GTGCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.............::........x.xx.x...x........:.::....x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 92669219 NA +8109 chr4 + 190214555 168709012 168709011 168709167 156 TTCTCTTCACTTCCAGAGGAGATTTGCACCCTAGTTATCGCTGAGACTTTCCCTGAAGATGCAGGGATCTTTACATGTTCAGCAAGAAATGATTATGGATCAGCAACCAGCACTGCCCAGCTGGTTGTCACCTCAGGTATGTGAGGAGTAAAAAAA chr4 + 94230402 26177799 26177798 26177954 26177799 26177798 26177954 156 TTCTGTTTATTTCCAGAAGAGATATGCACTCTTGTAATTGCAGAAACTTTTCCTGAAGATTCAGGACTTTTCACATGCACAGCAACAAATGAATATGGTTCAGTAACAAGCAGCGCACAACTAACTGTCTGCTCAGGTATGTGACAAAAGGAAAGA ....x..:.:.......:.....x.....:..x..x..:..x..:.....:.........x....:x.:..:.....:x......x......x.....x....:...x....x:..x..:..:::....xx.............x:.:x::...:. 156M 116/156 74.4% 156/94230402 0.0% 0/156 0.0% 142531213 47683342 +3512 chr4 + 190214555 168709374 168709373 168709439 66 GTGGTGCGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......::.--....:.:.........:x::........x.xx.x...x................ 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 92676173 NA +17015 chr4 + 190214555 168711562 168711561 168712014 453 TCTCTTTCCCCTTCCTTAGCCAACACTGAAAACTGTAGTTACGAGTCAATGG---GAGAATCCAACAATGACCACTTCCAACACTTTCCACCTCCCCCTCCAATCTTGGAGACAAGTTCCTTGGAGTTGGCTTCAAAGAAACCATCTGAGATCCAGCAGGTGAACAACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGGAAACGAACGGAGTCCATCCCAGCCGTGGAGTAAATGGACTGATTAACGGCAAAGCTAACAGTAATAAATCTCTTCCAACACCAGCTGTCCTGCTTTCACCCACTAAGGAGCCACCACCTCTGCTTGCCAAACCAAAACTGTGAGTATTTCTGCATGGTTTTATAATAATTTCCATACCCCTGTTACATTTCCTGTCTGGTGAGAAAAAAACTTTTGCCTGTATTCAACTA chr4 + 94230402 26179196 26179195 26179643 26179196 26179195 26179643 448 TCTTCTTGATTTCTTTTAGCCAACTCAGAAAACTCCAGTCATGAGTCACTGACAAGAAAATCCAGCAGTGATGATTTCCACCATTTCCCACCACTTCCTCCAACT---GAATTTAGCTCTCTTGAGCTTTCTCCTACAAAACACATGGAGACCCACCAAATAAATAACACTGAATTGAGATCTGGAGTGACAGCCCTTCAATTAGATCTCAGTTCATCTGAGGAAAAAACAAATGGTATCCATCCCATTCATGGAGTAAATGGAATGATTAACAGCAAGCCAAATGGTGATAAGCCCATCTCATCTCCAGCTGTCTTGCTTTCACCTGCAAAGGAGCCACCACCTGTGCTTGCCAAACCAAAGCTGTGAGTATtt-tgctttgctttgctttgctttCTTTTCCTA---TAAACTTGTTATCTGTTGA-AAGTAAATTTTTGCCAGGAGTAAGTTA ...::..xx::.:::.........x.x.......x:...:.:......x..:---..:......:..:...:x.:.....x..:..:.....x.::.......::---..:x:x..:..::.x...:.xx..:.x.x:....xxx:x....:...x..::.:..:...x....:..::.x::x:.x:x.:...........x.:x.x:...:.x.xx.....::::....:..:..x:.........x:.:.............x........:....:x.x..::..:....::.:x.::..x.x.........:..........::.x...............x................:............-...x.x.:...::xx.:x....:x.x..:x---..x.:..x:.:....x...-..:x...:.......x.x.x.x.::.. 52M3I50M3D267M1D30M3D19M1D27M 304/445 68.3% 448/94230402 0.0% 11/445 2.5% 142532366 47682189 +4139 chr4 + 190214555 168734784 168734783 168734866 83 CATGGTGGCACACGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGACAGGAAGATCACTTGAGCCCAGGAGTTCAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::....--......:............:........x.xx.x::.x.......:.....:..:.:x:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 92701587 NA +3503 chr4 + 190214555 168752244 168752243 168752316 73 TGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:.........::::........x:xx.x.:.x.......:.....:..x:.x:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 92719039 NA +4410 chr4 + 190214555 168755974 168755973 168756095 122 GCTCCAGATTGACAAATGCTGAGA----AGATGGGAATTGGCTGCCATGCGTGCTATCTGTAGTCATGCACAGAAGATGATCAAGGGCGTTATACTGG--GCTTCTGTGACAAGATGAGGTCTCTGTG chr4 + 94230402 71291117 71291116 71291244 71291117 71291116 71291244 128 GCTGCGTGTTGACAAGTGGTGGGGTAACAGAAAGGAGCTGGCCACGGTCCGCACAATTTGCAGCCATGTACAGAACATGATAAAGGGCGTTACGCTGGTAAGTTTTGTGTTCAGGTGGCATTTTTGTG ...x.:x:.......:..x..:.:----...x:...::....::.x:.x..::.x..:..:..:....:......x.....x..........::....--:x..:....x:x..:..:x:.:.:.... 24M4I70M2I28M 82/122 67.2% 128/94230402 0.0% 6/122 4.9% 97464857 92749698 +4410 chr4 + 190214555 168755974 168755973 168756095 122 GCTCCAGATTGACAAATGCTGAGA----AGATGGGAATTGGCTGCCATGCGTGCTATCTGTAGTCATGCACAGAAGATGATCAAGGGCGTTATACTGG--GCTTCTGTGACAAGATGAGGTCTCTGTG chr4 + 94230402 71246653 71246652 71246780 71246653 71246652 71246780 128 GCTGCGTGTTGACAAGTGGTGGGGTAACAGAAAGGAGCTGGCCACGGTCCGCACAATTTGCAGCCATGTACAGAACATGATAAAGGGCGTTACGCTGGTAAGTTTTGTGTTCAGGTGGCATTTTTGTG ...x.:x:.......:..x..:.:----...x:...::....::.x:.x..::.x..:..:..:....:......x.....x..........::....--:x..:....x:x..:..:x:.:.:.... 24M4I70M2I28M 82/122 67.2% 128/94230402 0.0% 6/122 4.9% 97509321 92705234 +7333 chr4 + 190214555 168756066 168756065 168756202 137 GGGCTTCTGTGACAAGATGAGGTCTCTGTGTTCTCACTTCCCCATCAATGTCATTATGCAGGAGAATAGCTCTATTGTAGAAGTCAGAACTTTCTTGAGCGAAAAATATATCTGCAGGGTTCGGGTGAGCCCAGGTG chr4 + 94230402 71247058 71247057 71247194 71247058 71247057 71247194 137 GGGCTTCCGTTATAAGATGAGGTCGGTGTACGCTCACTTCCCAATCAATGTAGTCATACAGGATAACGGCTCACTTGTGGAAATCCGAAACTTTTTGGGAGAGAAGTACATTCGCAGGGTGCGCATGAGGCCAGGTG .......:..x.:...........xx...::x..........x........x:.:..:.....x..::....xx....:...:..x...x:..:...:.x..:..:..:..::.......x..x:....x....... 137M 102/137 74.5% 137/94230402 0.0% 0/137 0.0% 97509008 92705547 +7538 chr4 + 190214555 168756066 168756065 168756202 137 GGGCTTCTGTGACAAGATGAGGTCTCTGTGTTCTCACTTCCCCATCAATGTCATTATGCAGGAGAATAGCTCTATTGTAGAAGTCAGAACTTTCTTGAGCGAAAAATATATCTGCAGGGTTCGGGTGAGCCCAGGTG chr4 + 94230402 71291522 71291521 71291658 71291522 71291521 71291658 137 GGGCTTCCGTTATAAGATGAGGTCTGTGTACGCTCACTTCCCAATCAATGTAGTCATACAGGATAACGGCTCACTTGTGGAAATCCGAAACTTTTTGGGAGAGAAGTACATTCGCAGGGTGCGCATGAGGCCAGGTG .......:..x.:............x...::x..........x........x:.:..:.....x..::....xx....:...:..x...x:..:...:.x..:..:..:..::.......x..x:....x....... 137M 103/137 75.2% 137/94230402 0.0% 0/137 0.0% 97464544 92750011 +5356 chr4 + 190214555 168756198 168756197 168756280 83 AGGTGTTGCTTGTTCAATATCCCAAGCCCAGAAAGATGAGTTCATCCTTAAAGGAAATGACATTGAACTTGTTTCAAATTCAG chr4 + 94230402 71293904 71293903 71293986 71293904 71293903 71293986 83 AGGTGTTTCCTGTGCTGTTTCTCAAGCCCAGAAAGATGAGCTGATCCTTGAAGGGAATGACATTGAATTGGTCTCCAATTCAG .......x.:...x.x:.x..:..................:.x......:....:............:.x..:..x....... 83M 68/83 81.9% 83/94230402 0.0% 0/83 0.0% 97462294 92752261 +5478 chr4 + 190214555 168756198 168756197 168756280 83 AGGTGTTGCTTGTTCAATATCCCAAGCCCAGAAAGATGAGTTCATCCTTAAAGGAAATGACATTGAACTTGTTTCAAATTCAG chr4 + 94230402 71249167 71249166 71249249 71249167 71249166 71249249 83 AGGTGTTTCCTGTGCTGTTTCTCAAGCCCAGAAAGATGAGCTGATCCTTGAAGGAAATGACATTGAATTGGTCTCCAATTCAG .......x.:...x.x:.x..:..................:.x......:.................:.x..:..x....... 83M 69/83 83.1% 83/94230402 0.0% 0/83 0.0% 97507031 92707524 +7049 chr4 + 190214555 168756279 168756278 168756388 110 AGCTGCTTTGACTCAGCAAACCACAACAGCTAAAAACCAGGATATCAGAACATT-TTGGATGGTATCTATGTCTCTGAAAAAGGGACAGTTCAGCAGGCTGATGAGTAAAA chr4 + 94230402 71294275 71294274 71294385 71294275 71294274 71294385 111 AGCTGCCTTGATCCAGCAAGCCACTACAGTCAAGAATAAGGATATCAGGAAATTCTTGGACGGTATCTACGTCTCCGAGAAAGGAACAGTACAGCAGGCAGATGAGTAGAA ......:....::......:....x....::..:..:x..........:.x...-.....:........:.....:..:.....:.....x........x........:.. 54M1I56M 90/110 81.8% 111/94230402 0.0% 1/110 0.9% 97462004 92752551 +6150 chr4 + 190214555 168758529 168758528 168758739 211 TTCAGCATGAATCATGCAAACTTGGTGAACCATAAACCTCTCCCTGTGGATATGAGTTTGTTGGTA------TTTTAGTCTGCTTGGAAACAGTCTGAGAAACATTAA-ACCCAGCTTTTTTGAGGTTAGTCCAA---------ATTATTTTTTTA--GACTAGAGAAAAAAAAATATTATGTCTCCTAAGGAAACTTGTAACCACGAACAGTAAA-----------TTTTAAATGTTTT chr4 + 94230402 26200671 26200670 26200900 26200671 26200670 26200900 230 TTCAGAATGAATCATTCTAACTCGCTGAACCAGACTCCTCTCCCTGTGGGCATGTATCTGTTTGCATATATTTATCAGTCTGCCTGGAAACAGAATGAGGAGTATTCATGCATTGCCTTTTAGAGGAGAATCTGATGGATTTCTTTTCTTTTTTTATCGACT---TAGAAAAAAATACCAAG-------GGAAAGACTGTAGCCACTTACTGTAAACTAGAAAGCGGCTTTAAATGTTTT .....x.........x.x....:.x.......x.xx.............::...x:.:....x.:.------.x.:.......:.........xx....:.::...x.-:.x:x..:....x....xx.:..::.---------x..x........--....---x.:.........::.x.-------:.:..:x:....:....xx..x.....-----------:............ 66M6I36M1I26M9I12M2I4M3D17M7D27M11I13M 149/201 74.1% 230/94230402 0.0% 39/201 19.4% 142557858 47656697 +3288 chr4 + 190214555 168759172 168759171 168759238 67 TCCATCT---CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 51472479 51472478 51472548 51472479 51472478 51472548 70 TCCATCTTTGCAAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT .......---....x.x.x...::......:x.......:.......x.:.:.......:x..:.:.... 7M3I60M 52/67 77.6% 70/94230402 0.0% 3/67 4.5% 117286693 72927862 +3009 chr4 + 190214555 168759179 168759178 168759231 53 CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495003 1495002 1495055 1495003 1495002 1495055 53 CAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..:.........x.:......x.x......:.:..:...:.....x....::. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 167264176 22950379 +3496 chr4 + 190214555 168759180 168759179 168759235 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 167264180 22950375 +3123 chr4 + 190214555 168759182 168759181 168759233 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:......x........:.:..:...:.....x....::. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 167264178 22950377 +3282 chr4 + 190214555 168759182 168759181 168759237 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 167264182 22950373 +3202 chr4 + 190214555 168759184 168759183 168759249 66 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAGAAA chr4 + 94230402 51472490 51472489 51472555 51472490 51472489 51472555 66 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAA ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:....:x:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 117286694 72927861 +3174 chr4 + 190214555 168759185 168759184 168759238 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 83210765 NA +3388 chr4 + 190214555 168759187 168759186 168759240 54 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:x.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 83210767 NA +3222 chr4 + 190214555 168759191 168759190 168759244 54 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............x.xx.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 83210771 NA +3061 chr4 + 190214555 168759197 168759196 168759259 63 AAAAAAATATATATATATATATATATATATATATATATATATATATATAGAAACAATATATGC chr4 + 94230402 81165025 81165024 81165087 81165025 81165024 81165087 63 AAAGTAATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAGTATATAC ...:x........:.x........:...x:xx..x.....:......x...:.x.:.....:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 87594172 NA +3204 chr4 + 190214555 168761621 168761620 168761757 137 CAGCTATTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGTTTTTTGTTTTGGTAGAGACGGGGTTTCA---CCATGTTTCCGCGGCT-----GATCTCAAACTCCTGGGCTCAAGTGATCCACT chr4 + 94230402 44143127 44143126 44143270 44143127 44143126 44143270 144 CAGCTATTTCTGTCTTTGCTGTTTCTTTTTTTCTTTCCCTTTGTGAAACTTTTTTTGTCTTATTTTTGTTGTATAAGGA-GATGATTCACAGCTATTTTTCTGGGTCTGTAAGGATTGAAGACCGCTGACCCCTGGTAATGCATT .........:...:x...:.....x.......:...:::...x.xxxx:.........xx.x....xx..xx:..::..-.:x.x....---.:..x....:.x.x..-----...:xx.:..:x...:x.:.x:..:..x..:. 79M1D9M3I16M5I32M 89/136 65.4% 144/94230402 0.0% 9/136 6.6% 124618494 65596061 +3008 chr4 + 190214555 168761625 168761624 168761669 45 TATTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 35905422 35905421 35905466 35905422 35905421 35905466 45 TGCTTTTGTTGTTGTTGTTTCTCATTTGTTTTTTTTTTTTTCTTT .::.................x.:x...x.............:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 132856203 57358352 +3000 chr4 + 190214555 168761627 168761626 168761678 52 TTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT chr4 + 94230402 62407456 62407455 62407507 62407456 62407455 62407507 52 TTTTTGCTGTGGTTCTTTGTTTTGTGTTTTCTCCTTTATTTTTCTTTTCTGT ......:...x...x........x.x....:.::...x.....:....:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 106354171 83860384 +3125 chr4 + 190214555 168761627 168761626 168761669 43 TTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 22617888 22617887 22617930 22617888 22617887 22617930 43 TTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTTTTT .........:.:.....x:.......::............... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 146143739 44070816 +3170 chr4 + 190214555 168761627 168761626 168761674 48 TTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 6181194 6181193 6181241 6181194 6181193 6181241 48 TTGTTGTTGTTGTTGTCTATATTTTCTTGCTTTTTTTTTTTTTCTTTT ..x.............:.:.x....:..x:.............:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 162580433 27634122 +4033 chr4 + 190214555 168770931 168770930 168771002 72 GCACTTGTAGTCCCAACTACTTGAGAGGCTGAGGCTGGTGAATCACTTGAAGCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...:........:........x.:x.....x........x....:..x:xx:..:..:.. 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 92737725 NA +3091 chr4 + 190214555 168774592 168774591 168774670 79 GCGGTGCACACCTGTAGTCCCAGCTACTTGAGGCACTAAGGCATGAGAATTGCGTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.......:--......:............::x:..:..x.x..x...x::.x......::.:..x.xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 92741391 NA +3343 chr4 + 190214555 168789575 168789574 168789635 61 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGAGGC chr4 + 94230402 76033205 76033204 76033265 76033205 76033204 76033265 61 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::.x......:...........::........x.xx.x...x.:........x:..:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 92756370 NA +3328 chr4 + 190214555 168793108 168793107 168793170 63 ATATTTTATATAT---GTGTGTGCATATATATACATATA--------TATGTGTGCATATATATACATATATAT chr4 + 94230402 56867285 56867284 56867358 56867285 56867284 56867358 74 ATATTTTATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGT ..........:..---.......x...:...:.......--------...x.......:........x:...:. 13M3I23M8I27M 54/63 85.7% 74/94230402 0.0% 11/63 17.5% 111925823 78288732 +3452 chr4 + 190214555 168806863 168806862 168806929 67 TGTGTGTGTATATATATATACACATATATGTGTATAAACATGTATATGCACACACATTTACACACAT chr4 + 94230402 85834553 85834552 85834615 85834553 85834552 85834615 63 TGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACA----TACACACAT .........:...xx..:..x:....:..:....x.x......x..........----......... 54M4D9M 52/63 82.5% 63/94230402 0.0% 4/63 6.3% 82972310 NA +3513 chr4 + 190214555 168808349 168808348 168808422 74 GTGTACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:..x......:.........::.:........x.xx.x...x::.........:.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 92775145 NA +3222 chr4 + 190214555 168811753 168811752 168811792 40 CTCTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:::..................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 93563704 NA +3689 chr4 + 190214555 168811755 168811754 168811794 40 CTTTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................................... 40M 39/40 97.5% 40/94230402 0.0% 0/40 0.0% 93563706 NA +3199 chr4 + 190214555 168811757 168811756 168811798 42 TTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::...............x.x.................. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 93563710 NA +3002 chr4 + 190214555 168811758 168811757 168811792 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 156210453 34004102 +3253 chr4 + 190214555 168811758 168811757 168811796 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 93563708 NA +3316 chr4 + 190214555 168811759 168811758 168811794 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 156210455 34004100 +3102 chr4 + 190214555 168811761 168811760 168811796 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 156210457 34004098 +3501 chr4 + 190214555 168830103 168830102 168830174 72 GCGCCTGTTATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x...x:.:...........::........x.xx.x...x.:...........:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 92796897 NA +3075 chr4 + 190214555 168847626 168847625 168847686 61 TTTACATTTACTTTATTATCGTACTACTTTCACTTTATTTTTTAATTAATATTTTATCTTT chr4 + 94230402 29208225 29208224 29208285 29208225 29208224 29208285 61 TTTGTATAGACTTTATTATCATACTACTTGCAATTTATTTTGTTATAAGTGTTCTATTGTT ...::..xx...........:........x..x........x.x..x.:.:..:...:x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 139639401 50575154 +3362 chr4 + 190214555 168852513 168852512 168852583 71 CACCTGTAGTGCCAGCTACTCGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAAGTCAAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......x.........:.::........x.xx.x.:.x::.....:.....:.:x.:x:.....:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 92819306 NA +3339 chr4 + 190214555 168867073 168867072 168867159 87 TCCACTTCTTTCCAGCTGCATAATCTTGGACAACTTACTATATATCTTTGTGCCTCAATTTCTTCATCTGTAAAATGGAGATAATAA chr4 + 94230402 79037097 79037096 79037183 79037097 79037096 79037183 87 TTTATTTCTGACAAGCTGTATGACCTTAGGGAAGTTATTTTATTTATCTGAGTTTCAATTCCTCCAAGTATAAAATGTGGAAAATAA .::.:....xx.x.....:..:.:...:.:x..x...:.x...x.x.:..x.::......:..:..xx.:.......x:..x..... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 89829976 NA +19650 chr4 + 190214555 168877706 168877705 168878401 696 TCTCTTTTTCCCCCC---AGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGA----GGCCGGCGCT--------CGGCAGC--------CTCCGCCAGCCCCGCGCAGCGCGCCGCCCTCGCCCCCCTTCCCGCCGCCGCCCGCCTTCCCCGAGCTCGCGGCCTGCACGCCGCCCGCGTCCCCGGAGCCCATGAGCGCGCTGGCCTCCCGCTCCGCCCCCGCCATGCAGTCCTCCGGCTCCTTCAACTACGCGCGCCCCAAGCAGTTCATCGCCGCGCAGAACCTCGGGCCCGCGTCGGGCCACGGCACGCCGGCCTCCAGCCCCAGCT-CGTCCAGCCTCCCGTCGCCCATGTCCCCGA------CGCCGAGGCAGTTCGGCCGCGCCCCCGTGCCGCCCTTCGCGCAGCCCTTCGGCGCTGAGCCCGAGGCCCCGTGGGGCTCCTCCTCGCCGTCGCCCCCGCCCCCGCCACCCCCGGTCTTCAGCCCCACGGCTGCCTTCCCGGTGCCCGACGTGTTCCCACTGCCGCCGCCACCACCGCCGCTC---CCGAGCCCGGGACAGGCGTCCCACTGCTCGTCGCCTGCCACCCGCTT---CGGCCACAGCCAGACGCCCGCGGCCTTCCTCAGCGCTCTGCTGCCCTCGCAGCCGCCGCCGGCGGCCGTCAACGCCCTGGGGCTGCCCAAGGGTGTCACCCCCGCGTGAGTA chr4 + 94230402 26253831 26253830 26254553 26253831 26253830 26254553 723 TCTATTTTTCCTTCCTACAGGGACCCTATAAAAATACAGCAGCTGCAGAACCAAATTCGTCTGGAGCAAGAAAGTGGCCAGTGGTGTCGTCACCAGCAGCAATCTGAACATCGTCAGC--------ACACTCCCTCATCTCCTTCCTTTCCTCCTCCCCCCTCCTTCCAAGAACTCGAGTCCAGCCAGTCTATTGTTTCTCCTGTGCCAATGAGTATTCTCAACTCTCACACTTCCCCAAGCATGCAGTCTTCCAGCTCCTTTAACTACGCTCGGCCTAAGCAATTCATTGCTGCTCAGAACATCAGCCCTGCTTCAGGTTACGTGACTCC-TTCTTCAGGATCATCTACATCCAGCCTTCCTTCTCCCATGTCTCCGACTGCTTCTCAAAAACAGTTTGGGAGAGTACCTGTTCCCCCTTTCTCTCAGCAGTTTGCTCCAGAAGGGGAGTATGGATGGTCTCCTTCTTCTCCATCTCCTCCCCCCCCACCTCCGCCTGTCTTTAGTCCAACCACAACGTATCCGGTGTGTGATtccttcccacttccaccccctccacctcctccccttccttccctttcttcaccttcccACAGCCTGTCTCCAACTCCTAGATTTCCTAATTCTGGCCAGTCTCCAGCAGCTTTTCTCAGCTCCATGCTGCCATCCCAGCCACCACCCGTTTCTGTCAACGCATTAGGCCTCCCGAAAGGAGTGATGCCTCCGTAAGTA ...x.......::..---.........x.:..:x.x.....:..x...........:..x........:..----....:.:.x.--------.:.....--------.x:..:....--------:.:.x..x:.x..x..::....:..x..x..x...x......xx..:....x.x..x..xx.:.xx::.:x..:..x.x...x.....:::x..x:x...:.:.x.:x....x:x.........:...:.......:........x..x..:.....:.....:..:..x......x..:.x..:..x..:..::...xx..x..-x:..:...xx:..x..-.:........:..x..x........:....------.x.x:.::.....:..xx.x.:x..:..x..x..:...x.x....xx..:.x:x.x..:xxx...xx:xx:...xx::.:..:..x..:..x..:..x.....:..x..x..x.....:..:..x..x:.x:.x.x:......:x:..:x:x........x..:..x..x.....x..x.:.---..xxx..:xxxx:x:x.x......x..::...x..x:.:x.:x.x..---:::::x::.....x.x..x..:..:..:......x.:x.......x..x.....:..:..x.:xx.:........x:.:..x..x..x..:..x..x.:x..:x...:.... 15M3I53M4I10M8I7M8I10M8D205M1D16M1I30M6I182M3I47M3I112M 449/687 65.4% 723/94230402 0.0% 45/687 6.6% 142623875 47590680 +9984 chr4 + 190214555 168890912 168890911 168891060 149 TATCCTGCAGAGGATTTCCAAAGAAGGCCAGTAGAACTGCTAGAATAGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGAACAATGGCCAGCCGGTA chr4 + 94230402 26265600 26265599 26265748 26265600 26265599 26265748 149 TGTTTTGCAGGGGATTTCCCAAGAAAACAGGCAGAACTGCTAGAATAGCATCAGATGAAGAGATTCAAGGATCAAAGGATGCTGTGATTCAGGATCTGGAAAGAAAACTTCGCTTCAAAGAAGACCTTTTGAACAACGGGCAACCGGTA .:.::.....:........x.....::.x:.:.................x..x.....:..:........xx.............x.....:..:......x................:..:.....::.......:..x..:...... 149M 122/149 81.9% 149/94230402 0.0% 0/149 0.0% 142625312 47589243 +7805 chr4 + 190214555 168894531 168894530 168894692 162 TTGTGATTTTTTTCTAATTTTGTATTTTTTGTGACTTACGTTGTTTAGAGGTTAACATACGAAGAAAGAATGGCTCGTCGACTGCTAGGTGCTGACAG---TGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGAAACAGCTAATCAGGTACCATGTTGCTCT chr4 + 94230402 26268497 26268496 26268651 26268497 26268496 26268651 155 TTGCGCTCTTTGTTTTATTTTGTTTTGTTC----------TTGTCCAGAGATTAACATATGAAGAAAAAATGGCTCGTCGATTGCTGGGAGCAGACAGTGCTGCAACTGTCTTCAATATACAGGAACCAGAAGAGGAGCCTGCAATACAGGTGCTGCGTAACTCT ...:.x.:...x.:.x.......x..x..:----------....::....:........:.......:.............:....:..x..x.....---............:.....x.....:...........:x.x..x.xx.....:.:::..x:.... 30M10D58M3I64M 119/152 78.3% 155/94230402 0.0% 13/152 8.6% 142626034 47588521 +3400 chr4 + 190214555 168895251 168895250 168895324 74 GCACACCTGTAGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::...x......:.........:.::.:......x.xx.x...x::.........:.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 92862047 NA +3699 chr4 + 190214555 168896079 168896078 168896139 61 GTGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGACATGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:........x:.::........x.x..x...x.:...........:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 92862875 NA +6492 chr4 + 190214555 168896527 168896526 168896689 163 ATCTTTTTTTCTACCATTACAGGACATTGGTTCTCCTCATGCTTCTGTAGGGAGTCCTCTGGATGGTCAAAAGGTTAAGCTTTTCACCTTTCTTCTCCTTCCAGTCTTTCTCTGTGTCTGTTTTCTTCTG-TTCTTCCTGTTTTACGTGTGTTTCTATCTTTTC chr4 + 94230402 26269181 26269180 26269330 26269181 26269180 26269330 150 ATCTTTTTTTCTACTCTTGCAGGAAGTTTGTCCTACTGATGCTTCTGTAGTGAGTCCTATGGATATTCAAAAGGTTAACATTTTCACCTTTTTCTTTCTT--------------TGTTGTTTTTCCACTGattttttttttaatatatatatttttaattttCC ..............:x..:.....x:..x..:..x..x............x.......x.....:x............xx...........:.::.:...--------------...:xx.....:x...-..:..::.x.xx..::.:.:...:..x:...:. 100M14D16M1I33M 111/149 74.5% 150/94230402 0.0% 15/149 10.1% 142627346 47587209 +16561 chr4 + 190214555 168898038 168898037 168898743 706 CTTTTACTATAATTGTATATAATATGGCAGCTGCTTGCCACATGTACT-------ATGTGGAGAGATGTACCACCCTGCATCAGCTTTTACCCTACAGAAGGAAAT----CAGCGTTCCATTATATTTTATTGTTATCAACAGTTTAGGAATACATAGCTTTGCTTTTGCCTTTTTCTTTCCTTCCCCTTGTTTCCCCTCGCCTCAGAGAAAAGAAGGAAAAAAAAATTCA------------TCTTTCCTACCCCCCTCTTTTTGGATGATAGGACTTGAAGACAATCTGAAATACCACATAAACTCACTTCCAGATGTTTT--TTGTTTCATATGCAATTGAATTGGG-CTCAGACT---GTGTTTTTAAGCTGTATGGTAAAAATATCACTGTCTTCTAGGGCCTTATTGG-------GGGGCAGGGAGA----------------------------------------GACGTGACACTTTGTCAGAAGGGATTGAGTCT----GCTAACTTAAACTTTCCTTGATT--CAGGAATACAAAGTCTCCAGCTGTGAACAGAGACTCATCAGTGAAATAGAGTACAGGCTAGAAAGGTCTCCTGTGGATGAATCAGGTGATGAAGTTCAGTATGGAGATGTGCCTGTGGAAAATGGAATGGCACCATTCTTTGAGATGAAGCTGAAACATTACAAGATCTTTGAGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTGGAAATCCAAAGCCAAAGGTGAGCTGGGAGATGGAGGCTTTTTAAGA chr4 + 94230402 26270261 26270260 26270983 26270261 26270260 26270983 723 CCTCTGGTACGGTTCTATGCAA-ATAGCAGATGTGAACCATATGGTCTTCTGGCCATCTGGAAGCAAAACCTACCCTAAATCTGCCCGTACCCT---GAAGGAAATATTACTGTGTTCCTTT-----TTGTCTTTATGAACTGCTTTGGAATAC------------------TTTTATAACCTT---------------------------AAAAAAAAAAAAAAAATTGAAAGCAACCAATGGCTTTCCTTCCCC-----TTATAAATTA---GACCTTAAGATAACATGAATTACAGTTTTTGCCTCATACCAGATGTCTTCATTGTTTCATAGGGAAGTTATTGGAGACACGGATTATAGTGTTGTTCTGCAACAAGATACAATTTCCCTTTATATGGAGAATCTTAATGGATTGTCAGAGATCAGTAGAATAACAACAACAATTGCAAAAACATCTTGCACACATCCATGATGCAATGCATCTTGATATG---TTGAATCCTGACATTAATATGAACCTTTCTTATTTGACAGGAATATAAAGTCTCCAGCTTTGAGCAAAGATTGATCAGTGAAATTGAATACAGGCTGGAGAGATCTCCTGTGGAGGAATCAGATGATGAGGTGCAACATGGAGATGAACCTATTGATAACAGTGCGTCACCATATTTTGAGATAAAGCTGAAGCATTACAAAGTCTTTGAGGGAATGCCAGTCACATTTACCTGCAAAGTGACGGGAAATCCAAAGCCAAAGGTAAGAGAAGAGAGTGAACAGTTCTAAAA .:.:.:x..:::..x...::..-..:....x..:xx:...:...xx..-------..x....::x.x:xx.:.....:x...x..::x......---.........----.x.:.....x..-----..:.:x....x...x.:..x.......------------------....x.xx....---------------------------..:..::...........x.------------x.......x....-----..x.::..x.---...:.x....:..:x....x...x::x.xx:.::xx.x........:..--..........x.x..x.x.x.x.:.-.x.:..:.---.....x..xx..x::.x.:..x..x.x:.x:.xx:x.xx..:::....x...-------.:.::x:.x...----------------------------------------..:.::.::.x.:x.x.x.x.---....:..:----::...:x.:...:..:...:x..--........:.............x...:..:...:.x...........x..:........:..:..:...........x.......:......:..x..::.........x:...:.x..x..::.x::.x......x:........:........:........::...................x..x..:..x..:.:....:.x....................:..xx::....xx..:xxx..:...:. 22M1D25M7I39M3D9M4I12M5D27M18D12M27D20M12I13M5D10M3D49M2I25M1I8M3I52M7I12M40I21M3D8M4I23M2I254M 448/641 69.9% 723/94230402 0.0% 147/641 22.9% 142627777 47586778 +3399 chr4 + 190214555 168899777 168899776 168899859 83 CATGGTGGTGGGCGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--....:.::..........::........x.xx.x...x::..x........:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 92866580 NA +11785 chr4 + 190214555 168903739 168903738 168903928 190 CTTTGTTTCTATTCACAGATCTATTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAGTGATCACTACACCATTCAAAGAGATCTCGATGGGACCTGCTCCCTCCATACCACAGCCTCCACCCTAGATGATGATGGGAATTATACAATTATGGCTGCAAACCCTCAGGTAAAGAAGGGTATAGGTCTGG chr4 + 94230402 26275863 26275862 26276052 26275863 26275862 26276052 190 CTTTGTTTTTCCCTGCAGATTTATTGGTTTAAAGATGGGAAGCAAATTTCTAAGAGAAGTGATCACTACCGAATTCAAAGAGAACCTGATGGAACTTGCTCACTGCATACTGCAGCCTCCACCCTGGATGATGATGGGAATTACACTATTATGGCTGCTAACCCACAGGTAAATGAAGGTTTGGCTCCAG ........:.x::::.....:.......................:..:...xx:.::............xxx...........x.::.....:..:.....x..x.....::.............:.................:..x...........x.....x........x:.:...x.:.x..::. 190M 151/190 79.5% 190/94230402 0.0% 0/190 0.0% 142627876 47586679 +3038 chr4 + 190214555 168905119 168905118 168905168 50 TTTGTTTTTTGTTTTGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79896037 79896036 79896086 79896037 79896036 79896086 50 TTTGTTGTTTGGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTTTGGCTTTT ......x....x..x.......xx...................xx:.... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 89009082 NA +3053 chr4 + 190214555 168905119 168905118 168905157 39 TTTGTTTTTTGTTTTGTTGGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 55070523 55070522 55070561 55070523 55070522 55070561 39 TTTGTTTTTTGTTTGGTTAGTTGTTTTTTTTTTTTTTTT ..............x...:...x................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 113834596 76379959 +3028 chr4 + 190214555 168905125 168905124 168905177 53 TTTTGTTTTGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAA chr4 + 94230402 2782385 2782384 2782437 2782385 2782384 2782437 53 TTTTGTTGTGCTGGTTTGTTTTTTTCTTTTCATTTGTTTGTTTCAAGAAGGAA .......x..:......x.......:....:x...x...x...::...x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 166122740 24091815 +6212 chr4 + 190214555 168913917 168913916 168914050 134 ATTTCTACAGGGCCGCATCAGTTGTACTGGACGGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCCCGGTCTCCCTCAGGCCATCCTCATGTCAGAAGGTATTTAACA------TGTTCCTTCCCAGAAGTGT chr4 + 94230402 26279332 26279331 26279471 26279332 26279331 26279471 140 ATTATTACAGGGCAGAATAAGCTGCACAGGAAGGCTGATGGTTCAGGCTGTAAATCAGAGAGGCCGCAGCCCTTGGACACCTCCTGGCCAGCCTCATATCAGAAGGTACTTGATGCTTTTTTGTTCTCTTCTAACAATAT ...x:........x.x..x..:..:..x...x....:.....x........x..:..:.....:..x..:..::..x.x..::.x.....x......:..........:..:.::------.....::.:.:.:x.:.:. 115M6I19M 96/134 71.6% 140/94230402 0.0% 6/134 4.5% 142634585 47579970 +11282 chr4 + 190214555 168915866 168915865 168916032 167 TATCTATCTGTCATCTT-TCTTGTTTCAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGACGAAAATGAACCAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCCTGGAGATCTGACTGTTCAAGAAGGAAAACTCTGCAGAATGGACTGCAAAGTAAG chr4 + 94230402 26282145 26282144 26282312 26282145 26282144 26282312 168 TATCTTACTGCTATTTCATGGTATTTTAAGGCCGCGGTCTCGATCAAGGGACAGTGGTGATGAAAACGAACCAATTCAGGAGCGATTCTTCCGGCCCCATTTTCTGCAGGCCCCTGGAGACCTGACTGTCCAAGAAGGAAAACTCTGCAGGATGGACTGCAAGGTAAG .....xx...::..:.:-.xx.:...:......x..x...x................x..:.....:........................x.:..:..:..::.......:........:........:....................:...........:..... 17M1I150M 140/167 83.8% 168/94230402 0.0% 1/167 0.6% 142633721 47580834 +14400 chr4 + 190214555 168921491 168921490 168921744 254 TGTTTTAATAC----AAAAATTTACATGTATTTCTTTTATGATTTAGGTCAGTGGGTTACCAACCCCAGATCTAAGCTGGCAACTAGATGGAAAGCCCGTACGCCCTGACAGTGCTCACAAGATGCTGGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGAGCCAGTCACGTCACGTGATGCCGGCATCTACACATGTATAGCTACCAACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTTGTGGTTGCTGGTA chr4 + 94230402 26283171 26283170 26283428 26283171 26283170 26283428 258 TGTTTTTGCACGGCAAATAATTTCCCGTTGTTCTGTTTACACTGAAGGTTAGTGGATTACCAACACCTGATCTAAGCTGGCAACTAAATGGAAGACCCATTCGTCCTGACAGCTCTCACAAAATGCTGGTGCGTGAGAACGGGGTGCACTCCCTGATCATAGAACCGGTCACCGCGAGGGATGCGGGAATCTACACGTGTGTCGCCAGCAATCGAGCTGGAGAAAATACATTCAGCCTGGAGCTCATTGTTGCAGGTA ......x::..----..x.....x.xxx.:..::x....::x.xx....:.....:........x..x..................:......::...:.x..:........:x.......:.............................:...........:..:.....xx.:x.x.....x..x........:...:.x..:.x...:.....x...x.:..:x................::.x.....x.... 11M4I243M 199/254 78.3% 258/94230402 0.0% 4/254 1.6% 142638320 47576235 +3067 chr4 + 190214555 168922080 168922079 168922135 56 TATATTTATATATATATATATATACACACACACACACACACACACACACACACACA chr4 + 94230402 61270780 61270779 61270835 61270780 61270779 61270835 56 TATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .......:.......:......::...::.....x....x..:::.:.x::..... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 107651300 82563255 +12826 chr4 + 190214555 168924244 168924243 168924533 290 TGTTTTCTTAGCTAAAGAAGCACACAAACCCCCTGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGTCGTGTATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAAAGAAAATGAATCACTCACTCACAGCACTGACCGAGTGAGGTAAGACTGC---ACAATGAGAACCTGATCCTTAACTGTTCAGTCCTAATGATGTATCAAAAGATACATTTTATATAGCATGGAAATCTATGTGTAAAAGCCACATAGATGTTTTG chr4 + 94230402 26284107 26284106 26284379 26284107 26284106 26284379 273 TATTTTCACAGCTAAGGAAGTACACAAAGCACCTGTGTTTATAGAGAAACTACAGAACACAGGTGTGACTGAGGGATTTCCAGTGCGACTGGAGTGTCGAATCTCGGGGGAACCATCACCTCAGATATTTTGGAAGAAAGAGAACGAGTCAATCACACACAATACTGACAGAGTGAGGTAAGACTGTCTGAGAATAATAGCTCTATGCCTAAC--TTCAG---TAATGATTTGTCCTGTAATACAT----------GTGAAAACCTA-----AAAGGTCATAAGAATGCTTTG .:.....x:......:....:.......x.x...........x.....:..x..:........x..x:....x..:.x:........:.....:.....x:.x.:...:.x:...:.........................:..:..:...x....x....::......x................:---.x...:.x.:.::x..x.:....--.....---.......x.:..xx:x:......----------:..:...:...-----...:.:..:.x::...:.... 187M3I23M2D5M3D23M10D11M5D21M 207/270 76.7% 273/94230402 0.0% 23/270 8.5% 142640137 47574418 +45495 chr4 + 190214555 168924934 168924933 168928414 3481 CTTTTCTCCAGCATGCACCAGGACAACCACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAAAAGAAGATGCTGGGTGGTATACTGTGTCAGCCAAGAATGAAGCAGGGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACAGTGAGTGCCACTTCATCTCATTTCATTGCGTTTACTCATTAAATTATGAAAAATTAGACATCTGGACAGCAAATCACATTACTCTTTATAAACAACTATTGTGTTTTATTTGTCAAAAAAATTCATATTGCTCTCTCTCTCTTTCTATTTGTAGTTTCTCGACATTAATAGTGAACCACACCAGGAGAACAAATACCC-----AAGTATCATTCAGGAACTTTGAATTATTAGCA------AAATATGCATGTTGATTTCTCTTACATTGGCTAGTTAGTTGTGGCTTCCTTACTCAAGCATCCTTAGGAGTTAACAGTAGGCAAAGGCATAACCATGTTTTTCACATGTTCTTGTTACTGTGTTCTGCAAATGACTGCCTTTTAACATTTCTTCCTATATTCTATCGCAGTGTCCTAATGCACTCTAAACGTGTGTTCCATTGATCCTGGAATGCGTACTTTTGTGGCTTAGTGCTTTTCTCATTAATATATCTTAAGCAGCCAGCAGTAGACTTGTGTTTGTATATTTGTGTACATGCATCCCAAATTTAAAGAAAATTATTCCTATTGAATTTACAGTCTAGTACAATCAGCATTATGTTATCCATTGACATAAAAAAAACACTAGAAAAAAATTAAGAATTTATTTAAGAATTTATTTCAGATTTTGCCTCTTCTTGAAATAACTATGTGAGGGTCATCAAGAAATGTGTG------------GCCTCAACCTTCCCTACTGTACGATTCCTTTCAGTTGATTAGTGTTAAAGCATCCACATCCAGCAGAATTCCTAAGTGCTAT-------AATTATTTTAGAGAAAATATTTTTTAAAAGGAGAGGGGGGATGAGAATTAGGAAGCT---TATCAGCTATTCCAAAGGATTCCCTGTGCTGCAGTGTTTACTTAAAAAAAAAAAAGATA--AACTACACTTGACCTTTGTAATCTAGCTGCTTTATTCCCACTATCCTGTATAGACAGTAAATCTGCAACATGTGAGTAAAATGCAA----------AAGTGTTCCTAAATTTTCCATG-------TTTCTA----CCATGGATGTGTTCAGGTGCCTTGCATCTATCTAGACATTCTG---TATTTATTTGAAATATCTAAAGGCTTTCCAAGTATATCTTGATTAAAAATCTTAATTTACTCTTTTTC--TTTGTAGCCCAGTGGCATCAGCAGTCACAGAGCACCAAGCCAAAAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCACTTTCGGACCAGGGACTAGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAA---------------TCCAGCAT-TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAAC-ATATTCCTTTGTCACATTATGTAAAAGGCAGAAACATACCTTTGACTATAAGAAATTAAAAAAAAAACACCAAAATAATATTTTTCTTACTTGATATACCAAACT--TAGTTTAAGTAGATAATGCTAATACAAATATACACATTGCACAGAAAATACACATTTACTGTCCAATTTAAAACTTTGGAATTGCTGTGATTAAAGTGATCA-----------AAATGCCAAAATAC-TAAAGGAAATCAATTGTTCACAGGTAACTACAATTTGTATTATCTACAAGTGCCTTTAAACACAAGATATAGGTGCTGTGTAGC-CTGATAGTGTGAAATGTTTAA--TGAGGGAGTTGTACCACAAACAGTACTA--------------CAATGATTCTGAAGC-ACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATA-TGTAAGGATGAAAGAAGAAGAGATGACAAAGAAATCCAAGTAAATGCCTTGTCTTTGCAAATGTTTTTATATTAAATCATAAGGAAGGAACTAC-TTGCCTTAAATG---TTAATATCAAAAGAGTTTTCTAACAAGGTTAATACCTTAGTTCTTAACATTTTTTTTCTTTATGTGTAGTGTTTTCATGCTACCTTGGTAGGAAACTTATTTACAAACCATATTAAAAGGCTAATTTAAATATAAATAATATAAAGTGCTC---TGAATAAAGCAGAAATATATTACAGTTCATTCCACAGAAAGCATCCAAACCACCCAAATGACCAAGGCATATATAGTATTTGGAGGAATCAGGGGTTTGGAAGGAGTAGGGAGGAGAATGAAGGAAAATGCAACCAGCATGA----TTATAGTGTGTTCATTTAGATAAAAGTAGAAGGCACAGGAGAGGTAGCAA-AGGCCAGGCTTTTCTTTGGTTTTCTTCAAACATAGGTGAAAAA-----AACACTGCCATTCACAAGTCAAGGAACCCAGGGCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGCACACATGCTGTGGAGATTGCAGTGTGTCTGAG-GTTTGTGTAGTA-GTG-GAAGATTTTAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCA-TGGTGGCATAAATGAGAAATTG--CCTGTAG-----CATCTAGTCTACTTGAAGGAAGTGGAGACATAAGGAGAGACAAAAACAGGTTTGTGCCATAAAGTATTTTTTCAAAGACACCAAGATGTGGTAAATGAAAATTATTAGTTCACTTC------CCTGCTGCCATGAAACTTTGCCT----------------TAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG-CATATGATTTTGCATC-AGCTAGA---CTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACC-GATAAATTTTAAA--AAGGAGA-----------AAAAATAATTTGACCTAGTAGTATAAAACATGAGGCTTTAATGG--------TACTTTGCTATGAAAAGAAAACACTGTATTCCTTATGCAAAACACAT-----GTATCTTTCATTATTTAT-------------AAGTGGCCTCTCTTAGCTCAGTTACTCAA----TTCATACGTAGT--ATTTTTTAAAATAATTTTATATCTGTGTACCACCCCATATATTTCATATTACTGTT-TCACATGTACAGCTTTCTACTTCTTTGTAAGAACACCAACCAACCAAGGTTTA----------------AGTGATTAATAGGCTTGAGCAC-CGGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTCTCTCATGG-----ACCTATCTCTATTGTAGAATTATGACTTATGTC---TTACTTGCCAAATTTTTCTGAA-TGTGAC-----------CTTTTTTTGCTGATTTGCTGGGTTTGGGATTAACTAGCATTATTTTGCCACCTTTATATTGTATTTATAAAAAAAAAAGTACTATCAATCAATCATACTACTTTGGATTGTTGTGCTGGTGTAATGTGGATTTAACATCAATAAATATTTGACAAA chr4 + 94230402 26285596 26285595 26288853 26285596 26285595 26288853 3258 CTTTTTTTCAGCATGCACCAGGACAACTATGGCTACATCTGCCTGCTTATTCAGGGAGCTACAAAAGAGGATGCTGGTTGGTACACCGTTTCAGCTAAGAATGAGGCCGGGATTGTGTCTTGCACTGCCAGGTTGGATGTTTACAGTAAGTG--ACTTCCTT--------TTTCGTGATCTCATTAATCCCTCAAAAGCAACAGTTCT-------------------------------ACAAGTGTCAGTTTGTTCACAGAATCATTTACATTGGTTTCTTTTTCTTT-TGTTTATAGTTTCTCCTCAATAATAACGATCCACATCAAGACAACAAATGCTCTGTCAAAGTA-CTTCCACCATCTTTCAGATACCAAAACGAAACAAGCATGCATGCACTCTATTTTTGC-TTAGTATATTAAATGTAGCT----------------------AATTAACAACATATAACGGCATGATTAGATGACTTGTGGATCATTATTACTAT-TTCTGTTAGCACTTCCC---TAACCTCTCGTATTCTTTTCCACCTTAG---CCTATAGTACACC-------TGTGACAACGA--CTAGA------ACTGTAGTAG-TTAG-GCCTTTCT------------------GCCTAGCTGTACA-----GTTTGT-------TCCACAGCAGCCCCTTACACAGTGAACATT----TTCTTAAACTAAAATTCCATTAC-------------CGATCCCCTCATAACAAGAATAAATGAATGGGAAAATGGGAA----------------------AGGTAGATGCTTTCTGGG--------GTGGCAGTGATAGAGAGACTTGCGAATTAGAACCTTGGCTCAGCATT--CTGCTGGA--------TTCAGGGGGT---------GGCGATGGCGACCAGATGATTTCCT--TTCCCATTACAGCCAGTAACCTTAGAACAGG---CTCACACAGTAATATTGGAGCACAGAAACACATACCTCGCTGTTAACC-TTCTCACTGATACTAGGAAAAGTAGAAAGCAATGCCAAAAAGGCAAGGTAACAACCACA---GACGCTTGT----------TTTTATTC-----ACCACGT-TTGAAGGTAAAACTAGATGCTGAGGAAAAAAAATAAACGCACCAAGAAATAAAACTTAACCTTTCATGTAATCCTTTTCTGCTGCCCAGAGATGAGT-------------GTCTCTTTACAAAGGATAGATTATGAATCTGATACACATTGTGGC-------AGAGATGATGATGCCTAATTTTTATTCTTTCCTTTTTAATTTATAGCTCAGTGGCAACAACCACCTCAAACAACCAAGCCAAAGAAGGTGCGGCCCTCAACCAGCCGATACGCTGCACTGTGTGACCAAGGACTAGACATCAAAGCAGCTTTCCAGCCAGAGGCAAATCCAGTCCATCTGACAATGCAGTCTGGTTTGGTAGAGAGCGATGACCTGTAGATCCGAGCCACCACTTCCATCATCTTCTTTCAAAGCAGAAACACTGAA--AGCCATTGCCTTGACCAATGATACTCCTATGTCACTTTATGC-AAAGGCAA----ACACCTTCAAGTACAAAAGA-TAAACAACAAACACAATAACCATGTATTCCTTATTCAGTATACCAAATTAGAAGAATAGGTAGATTAT--TAATAGAAATGTACACATTGCACAACAAAT-CACATTCACCATTTCCTT--ATACTT--AAGTTGCTTCAGCTCTTATGAATAACCCTTTTCATAAAGGCCAAAACGCATCAGTGAAACAGACTTTTCAGAAGAAAACAC---------TATCACCACGTGCCTTCGTAAGCAGTAAGTAGATGTTACACAATGCTAATGGTGCGAGATGTTTTATTTGAGGCCATTAGATGACAAAGAAAACTAGGATGTACGGTAACCTATAGTTCTAAAATGGCAATGCATTCTGATAGCTACAGTGAA-CAAGTGCAATATTGTAA----TAAAGGAAGAGACAAGGAAGAGAAATGTAAGCAAATGCTGCATCTCTGCAAACTGTTTTTTATT---CTACAATGAAAATAATACTTTGCCTTAAATGCCATTAATATGGACAGTTCTGTAAAGCAACGTTGAAGCCCCAGTTTTAAA--------TTCTTT-TGTATTTTTCCTTTCTACCACCTAGG-AGGAGGCTTACTTGCAAA-CATACAGCAAAGATGG-TTAAGCATGAATGATTTAACCTCTTCAAACTAATGAAGAAGATATGTAACACAGTCTACTCCAGACCATAAATCT---------------------------TAGTAACTAGAA----------------------------------GAGAAAAAGTGCTGACGGTATGAACTGCTGCAGTAGATT------GCTGCAAGGGGTGGGAGGGGGACAGG--GCAAGAGGCTGAAACTCTCCGTGGATTTCCT-GAAGACAGCCTGCAACCTCCTAACACTCCTGCTGAAGAGTCTGAAGTTCTAAGGTGAGCTGAAAAC-----------------TGAGGAACGTATGTAGGGGCCATTTGACT---TCTTAGCACTTGAGTAACACGTATGAGGATTTTAGAAATGTATAGTAAGTGAGAAGTGGGTTGAGACTGCAGTAGGAATTTCAATGAAAAGTAAACACCATAGGTGATAAGCTTGCAAATCTGAGGAAGCAGAAGATGGTGGACAAAACAAGAAAA--TTTG---CATCAGTTTTTCTTCTTATCATACACGTTTCTGG--------ATTTCTTTTTTTTCCTCATCCTTCCTGTTG---------TTTGCCTACAACAGCTCTGTTAATGGGTAGGGGCTGTGTGCA-------GTAGATG---------AAATGCTACTTTCAGAATGCCAGGCAAATCCACATCAAACTGGAGCTCTACCTCG--TCAGATCCGACAAGGTAGTTTTAAATTAGAACCAAATGAATTTCAGATGAAGGGGAGGGAGGGATGGAAGAGTTGCTAGGCCTGACAA---GAAAAATGAGTGTTTGATGGTACGAGCATACTTTGCTATGAAAGGAAAACACTGTATTCCTTATATGAAGCACATACATGGTATCTTTCATTATTTATAATAAAAGTGTTGAAATCTTTTATCCCAGTTCAGTTATTCAGAAGTCCTGTACTTAGTTGGTTTTT-----TAATTTTGTAATTGTGT---ACACCATATATTGC--ATTACTGCTATTAAGTG----------TATTGCTTTGTAAGTACA---------CAAAGTTTGTTTTGTTGTTTTTTTTAGTGACTAATAAACTTTAGCACATAAGTTAGTACTATTCTATGCAAATTGGTGCAGG---ACATGAC--CAGTTCTGGGAATCGTTCCTCTAAATT----AATGTCATGCTTTG--TTGTATGGGAATAATCTGATTATATTCTAGAA----AAAGTATGTCATATCATTTGCAAAATTTTTCACAACTGTGACATGCTAATTTACTTTTTTTTTTGTTTTG------TTTAGCTTCACTAGCATTATTTTGCCA-CTCTAT-TTGTATTTAT---AAAAAATGTACTATC----------ATTACTTTGGATTGTTGTGCTGGTATAATGTGGGTTTAACGTCAATAAATACTACACAAA .....:.:...................:.:.................:...........:........:........x.....:..:..x.....:........:..x...........:..:.........:....:.........:....--.....x.:--------..x...xxx........x::x.x....::x.x.xx...-------------------------------..x.x...xxx..xx..xx..:..xx...:.:....x.:...:.:.....-.:...:.........xx..x.....::..x.....:..:..x.......:.:.-----.....-.x.:..xx.x....x.:x..::.:x.------..::.......:xxx:.x:.:..:.-..:.:xx:...:x...:...----------------------.:......::.x::..x.....:.::.x:.xx:.::::x:.:x..:.....:.-.....:x.:::x:.x..---....x.:..x.x:.x.x...:.:.x:..---....xx.:..x.:-------...xx..x:..--..:..------...x.x..:.-....-..:.....------------------:x.:...x...x.-----......-------.x:...xxx::...xx.:x:.:x...x...----:.x..:..:.x.x.x..:.x...-------------:x....x:.x.:.xx..:..x.x.:x.:x:::...x.::...----------------------.xx.x.x:x...::..::--------...:x:..x..x:...:.:x..:.------------.x....:.x..--..:...x.--------.....xx.:.---------:..:x:x:.:x....xx..x.....--x.x.:..-------.:.x.::.....:x.::---:.:x:.x.:x:.x.xx..:.xxx....x:.x:x.x..---.:.:.:.:-...:x.xx...x.:xx.x:xx.:..x:xx:.x.xxx.....::x...:..--...:...---...x:....----------:.......-----.:.x:..-.x..x:.....x..:x.xxx..x.::x....x::..----------..:.:xxx..x..::..:....-------.....:----...x:....x..-------------:...x.:..x.x.xxx.:---...xx..:...x.:.:x.x:x...-------:x.x..xx....xxxx...:..x...:x:..:....:--...:....:........x..:.x::.x..:.xx...........:..:..:.........:....:..x..:..x.....x.xx.....:....................x.....:..x.....x..:...x::..:......x..x.xx...x:........:..:..x........:---------------....x...-.::.x.:.....x...........--..................:-...:....x......x.....:-.......:----.:.....::.x..:..:.:.-....x..x......x.x..:x..:.x..:....:.:::.........:.--x..xx..:......x..--.....x....:.............:x....-......:..::.::xx..--.x....--:.:.....x::::.xxx:...x:.-----------...x.......::.-.x.:x....:x:.:.x....x.:.x..x:..---------....xx..x.......::x.x:..:x.x:...:..:.::::.::-..:..:...:..:......x.--.....xx:..:x.:x.....x.:x....--------------.x..::....:..::-:..:..:....x..:..x.........-...........-.....----x....:.::...x.x.:x.:......x:...:......:x::...:......:xx....x....---::.:..x...::x.x...-............---.......x:.x..xx:.x.xx.:...x...:.x:..::....:.x..--------......-...:.xx.x::..:x.:.:....x..-....::....:..:....-....:x:x..:.x.::-....::..:...:..x...xx.x:..---:x...:...x...x..:..x:.....::.:....x.xx.x:x...:---------------------------.....x:.:..:----------------------------------..:::...:...x:x.:.:....----:.::...:x:..------.x.:x...x:.x:..x:x:...x...--....-....::::x:.:..:x...x....:.-:..x.:..x:x:x..x-----......x.:::.x.x:....x::::x:.:.:..:x.....:..::-----------------..::.x..::...:x.x..xx...xx.x.---...x..-::...x...::.-..:-..:........:x.....x..:....x::..:...:...........-.:.x:::x.x.....:..:.x:--x.::...-----x.x..x.:xx.::...:.:.:xx.:...::xx:.:x:.:....:..x.--....---...x.:x.x..:..::x.xx.:..xx:xx.x...--------.x..x..xx..:x.:..------....:..---------.......----------------.::.x...x....x:.x.x-------...:.x.---------...x:..:....:x.....-..x:::.x.:::....-.:..:..---..:xx.:.--..x..:.x...xx.:.:.......:.::.....-:..:.....:.:.--....:..-----------..:.:.x::.x.:...:::.:---:...x.....xx...:....--------...............:....................:::..:.....-----..................-------------..:.xx::.x..::..:.......:...:----::::...x....--:.....-----.......:..x:.....---..x.........x.--.......:.-.:.x:..----------..:.x.........x...---------...:....:----------------.....:.....::...x.....-:::..x:xx:x.:.........:xx....x..:.---x:x....--..x..x.:x.x..:.:.xx.x.::.x.----:..::...:.x:x.--.:x:....-----.:..:x:.x....x.....----:.xx......---.:.:....x.........xx..-......-----------........x:..x....------..x:.x..x..................-..:...-..........---......x........----------.:......................:........:......:..........:.xx..... 152M2D8M8D38M31D50M1D53M5I5M1D26M6I25M1D20M22D53M1D17M3D28M3D13M7D11M2D5M6D10M1D4M1D8M18D13M5D6M7D30M4D23M13D42M22D18M8D24M12I11M2D8M8D10M9D25M2D7M7I17M3D37M3I8M1D50M2I7M3D9M10D8M5D7M1D36M10I22M7I6M4I12M13D18M3I24M7D37M2I180M15I8M1I24M2D19M1I22M1D8M4D20M1D49M2I17M2D30M1D18M2D6M2D24M11I14M1I31M9D44M1I21M2I28M14I15M1I27M1D11M1I5M4D64M3D18M1I12M3I47M8D6M1D26M1D18M1D16M1D26M3I46M27D12M34D23M4I12M6D26M2D4M1I26M1D16M5I45M17D29M3D6M1I12M1I3M1I47M1I22M2I7M5I48M2D4M3D34M8D17M6I7M9D7M16I19M7D7M9D19M1I16M1I7M3I8M2D33M1I13M2I7M11I21M3D20M8I47M5I18M13I29M4I12M2I6M5D17M3D14M2D9M1I7M10D18M9D9M16I22M1I34M3D7M2D27M4D14M2D8M5I19M4D10M3I22M1I6M11I17M6D27M1D6M1D10M3D15M10D60M 2028/3008 67.4% 3258/94230402 0.0% 723/3008 24.0% 142639338 47575217 +3184 chr4 + 190214555 168934253 168934252 168934343 91 TTTAAAAGAAACTAGAAAAGCAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAGCAAGCCAAACCCAAAATTAGCAGAAGGAAAGAAATAAT chr4 + 94230402 67098105 67098104 67098195 67098105 67098104 67098195 91 TTTGCAATAACACCGGAAAACAGGTGAGGCAATAGCAAAACAAAAACAAAATGGAAGCCAAACCAAACAACAACAAGAAAAAAGGAATAAT ...:x..x..xx:x.:...:..::x:.::...x.:x....x.....x....x.x..........x..x.x:.:..::.::....:...... 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 101836148 88378407 +3160 chr4 + 190214555 168934266 168934265 168934339 74 AGAAAAGCAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAGCAAGCCAAACCCAAAATTAGCAGAAGGAAAGAAA chr4 + 94230402 3690419 3690418 3690492 3690419 3690418 3690492 74 AGAAATGGAAAAAAAACAAAAAACCAAAATGAAAGAAAAATCAATCAAAGCCAAAAGCCACTGACAAAAAAAAA .....x.x...............xx....x:...:....::x.::....x......x:x:.x..x::...:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 165243847 24970708 +3360 chr4 + 190214555 168943770 168943769 168943852 83 CATAGTGGCACGCACCTGTAGTCCCAGCTACTCAGGAAGCTGAAGTAGGAGGATCGCTTGAACCCGAGAGGTGGGGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x......:.........::::.:.....:x:xx.x.:.x.:.........:::..x.xx......:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 92910573 NA +3957 chr4 + 190214555 168961888 168961887 168962026 139 ATAGAAAGAAAGGAAGGGAGAGGGGAGGGGAG-----GGGAGAAC----AAGAGGAGAGCACAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAAAGGAAAGGAGAGGAGGA-AGGCAAGCAGGCCA chr4 + 94230402 32265484 32265483 32265632 32265484 32265483 32265632 149 ATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCA ...::::.::.x.x......x:x....:....-----.x...:.x----.:.:..:....x.:..::......:x:x.x.x.x:.x.::::..:..:.:................:.:....::::..::.x:.-..:x..:....:.. 32M5I8M4I85M1I14M 87/139 62.6% 149/94230402 0.0% 10/139 7.2% 136696404 53518151 +3089 chr4 + 190214555 169017364 169017363 169017433 70 CTGTCTCAAAAAACAACAACAACAACAACAACAACAACAAAAAACAAAAGTAAGCCCTTACCAAGATAAC chr4 + 94230402 34486970 34486969 34487034 34486970 34486969 34487034 65 CTTCCCCAAAACAAAGCAACAGCAGCAACAACAACAGCAAAAAAAAAAAA-----CCACACCAAGCAAAC ..x:.:.....x.x.:.....:..:...........:.......x....:-----..x:......xx... 50M5D15M 50/65 76.9% 65/94230402 0.0% 5/65 7.7% 134530394 55684161 +3667 chr4 + 190214555 169026295 169026294 169026404 110 GAAGGAAGGAG----AGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAAAGAAGGAAGGAAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAG--------AGAAGGAAGGAAGG chr4 + 94230402 51148380 51148379 51148500 51148380 51148379 51148500 121 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGA-AAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGG ...:....:..----.....................x.:.::xxx...:xx::..x.:.:x.x....:.x......-...::...:.:..:..::..x..--------..x.x......... 11M4I61M1D23M8I14M 78/109 71.6% 121/94230402 0.0% 13/109 11.9% 117877915 72336640 +3128 chr4 + 190214555 169026297 169026296 169026410 114 AGGAAGGAGAG---AGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAAAGAAGGAAGGAAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAGA---------GAAGGAAGGAAGGAGAGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA-AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ..:...:...:---.x...........:.........x.:.::xxx.:.:xx.:..x.:.:x.x:...:.x....:.::..:...:..-..:...:..---------....x.x.:.:.:..:... 11M3I74M1D9M9I19M 75/113 66.4% 125/94230402 0.0% 13/113 11.5% 117877918 72336637 +3486 chr4 + 190214555 169026352 169026351 169026454 103 AAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAGAGAAGGAAGGAAGGAG--AGAGAAAGAAAGAA-AGAAAGGAGAAAGAAAGAAAAAAAAGAAAAGAAG chr4 + 94230402 15855375 15855374 15855480 15855375 15855374 15855480 106 AAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ...::x.:..........:x.:.x........xxx:..x.::xx:.:....:..x--.....:...:....-.:.:....:..:..x..:...:..x.....:::. 55M2I14M1I34M 69/103 67.0% 106/94230402 0.0% 3/103 2.9% 153170977 37043578 +3292 chr4 + 190214555 169028382 169028381 169028462 81 TATTTCAAAATAAAGAGGTTTTTTTTTATCAGCCTTAATAATCAGAAAA-AAAGGAATAACTGATGACTCAGAGTATCTTTT chr4 + 94230402 31582832 31582831 31582913 31582832 31582831 31582913 82 TGTTTCAAAACATAGAAGAATTTTTTTATTAGCCTTAATAGTAAGGAAACAAGGGACCCAAAGCTGAGTAGGAATATCCTCT .:........:.x...:.xx.........:..........:.x..:...-..:...x:x.xx.x...x.x:..:....:.:. 49M1I32M 58/81 71.6% 82/94230402 0.0% 1/81 1.2% 137445550 52769005 +3111 chr4 + 190214555 169031975 169031974 169032053 79 GTGGCGCACACCTGTAGTCCCAGCTACTCTGGAGACTGAGGCAGAAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:....:--......:.........:x::..:.....x.xx:x...x.:.........:.:..x:xx:..:..:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 92998774 NA +3705 chr4 + 190214555 169032134 169032133 169032334 201 ATGCCTGTGCTTTGTTTTTACTTGAACACTTTAGATCTGAGAACTGAAATCACAGCAGGGCTGGGGCTCACCTGTTTCCTTGTACTTCCT-CACCTTCTCTTTTCTTCCT--TTCCTTCATCCTAACTTATTTTTTAACCCTTTTTTCTTTTCCTCTTCCTTCCTTATTCCCTCTCTCTCCTCTTTCCTTTCTTCCTTTTTCTT chr4 + 94230402 63697072 63697071 63697238 63697072 63697071 63697238 167 ATTTCCATGCTTTCTTATTAT-------ATTTAAATGTGAGTACT----CCACAG--------------ACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCAC------------AGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ..x:.::......x..x...:-------x....:..x....x...----:.....--------------..:.xx.....:x:x:....x-::::.........:.....--...:.::..:::::::.x.x.:..:.x.....x:.:...:x.------------.x..::......:.......:..............x.. 21M7D17M4D6M14D21M1I19M2I42M12D38M 112/164 68.3% 167/94230402 0.0% 40/164 24.4% 105335062 84879493 +4811 chr4 + 190214555 169032297 169032296 169032440 144 ATTCCCTCTCTCTCCTCTTTCCTTTCTTCCTTTTTCTTACC-CTCTTCCTTTGTTCCTCCCTTTCTTCTCCCTTTCCTCCTTCCCTTCTTTCCTTCTT---------CCTTCCTCCCTTCCTTTCTCCTTCCTTCCTCCTTCTCTCCCTTCTTC chr4 + 94230402 50176265 50176264 50176415 50176265 50176264 50176415 151 ATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTA--TTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTC-CTCCATTCTTC ...::..x....x.:x..:..............x..:xx..-..:..x.x......:.:.:x.....:x:x--...x.::..x:........:.....---------...:..:x::...:.x........:..:..:::..-....x...... 41M1I29M2D25M9I35M1D11M 100/141 70.9% 151/94230402 0.0% 13/141 9.2% 118856032 71358523 +3047 chr4 + 190214555 169032362 169032361 169032424 63 TCTCCCTTTCCTCCTTCCCTTCTTTCCTTCTTCCTTCCTC--CCTTCCTTTCTCCTTCCTTCCTC chr4 + 94230402 84992643 84992642 84992707 84992643 84992642 84992707 65 TCTCCCTTTTTTTTTTCCTTTTTTTCCTTCTTCCTCCCACTGCCTTTCTCTCCCACTATATCCCC .........::.::....:..:.............:..x.--....:..:..:.x:.x:x...:. 40M2I23M 46/63 73.0% 65/94230402 0.0% 2/63 3.2% 84039719 NA +3306 chr4 + 190214555 169040334 169040333 169040407 74 GCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGGTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.:.x....:.:...........::........x.xx.x...x.:x........:.:..x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 93007130 NA +3202 chr4 + 190214555 169045707 169045706 169045781 75 CAAAAAAAACAAAACAAACAAACAAAAAAACCAAAAA-----AACCCCAAGCTCTT------TTGACCATTTTTCTCAGCATCTTT chr4 + 94230402 17043009 17043008 17043091 17043009 17043008 17043091 83 CAAAAAAAACAAAACAAACAAACAAAAAAACCCCAAAACGACAACCC--AGCTATTCTTTGCTTGAATAATTCT-TCCGCATCTTT ................................xx...-----.....--....x..------....x:.x..:.-..x........ 37M5I5M2D7M6I12M1D11M 64/72 88.9% 83/94230402 0.0% 14/72 19.4% 152002698 38211857 +3152 chr4 + 190214555 169045711 169045710 169045757 47 AAAAACAAAACAAACAAACAAAAAAACCAAAAAAACCCCAAGCTCTT chr4 + 94230402 66953679 66953678 66953725 66953679 66953678 66953725 47 AAAAAACAAACAAACAAAAAAAAAAAGCAAAAAAACCCCAAACTTCT .....xx...........x.......x..............:..::. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 102092032 88122523 +3917 chr4 + 190214555 169046504 169046503 169046559 56 AAAAAAATCACACATGGGTTTGGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTTT chr4 + 94230402 57451154 57451153 57451209 57451154 57451153 57451209 56 AAAAAAAGCTTTCATGAGGTTGGTTTTTTTGTTGTTGTTGTTTTGTTTTTGTTTTT .......x.x:x....:.x........x............................ 56M 49/56 87.5% 56/94230402 0.0% 0/56 0.0% 111595350 78619205 +3030 chr4 + 190214555 169046522 169046521 169046557 36 TTTGGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTT chr4 + 94230402 58374888 58374887 58374923 58374888 58374887 58374923 36 TTGGGTTTTGTTGTTGTTGTTGCTTTGTTTTTGTTT ..x...................:............. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 110671634 79542921 +3101 chr4 + 190214555 169046526 169046525 169046567 42 GTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTTTGTTTGTTG chr4 + 94230402 79226640 79226639 79226681 79226640 79226639 79226681 42 GTTTTGTTGTTGTTGTTGTTTTGGTTTGGTTTTGGTTGGTTG .......................x...x.....x...x.... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 89819886 NA +3068 chr4 + 190214555 169094194 169094193 169094324 131 TGTTTTTTGTTTTGTTTTGTTTTTTTAAAAAGCAAAATTTTAAGGACTGACACAAGGGACA-TACAAA---GGTTTGAACATCAAATTTTAATCTTGAAACCTTTTATCCA----GTCCTCAAATTATTAAC--ATGAAAA chr4 + 94230402 31177407 31177406 31177546 31177407 31177406 31177546 140 TGTTTTTTGTTTTGTTTTGTTTTTTCAAAATATTAAATTTCCAGAGTTG-CACAGGCAGCAGTGGGAAGCTGGTCTGAATATGCAAGGATAAGTTCATGACACTTCAAGAAAATTGTTCTCAGATAACAAACCTATGAAAA .........................:....x::x......:x..:::..-....:.x::..-.:x:..---...:....:..xx..xxx...x:.::x:..x:..:.xxx.----..:....:..x.:x...--....... 49M1D11M1I6M3I40M4I17M2I7M 89/130 68.5% 140/94230402 0.0% 11/130 8.5% 137916787 52297768 +3232 chr4 + 190214555 169096569 169096568 169096669 101 GTTGTAATGTGCCTTTGAACCAGCCATCCTCTCGTTTTTTATGAACAAACACAATATCTCCTTCTTTAAGTTCAAGTTCTGCCTCACTCTGAGGAGGATAG chr4 + 94230402 62934762 62934761 62934862 62934762 62934761 62934862 101 GTTAAAACATACCCACAAACCATCCATCATCACATTTTTCCATCACATCAATGACATCTCCCTCTCTCAGCTCCAATTCATCTTCGTTCCTAGGAGTATAG ...:x..::.:..:x::.....x.....x..x.:.....:xxxx...xxx.::.:......:...:.x..:..x.:...xx.:..::..:x.....x.... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% 106161807 84052748 +4282 chr4 + 190214555 169120888 169120887 169121017 130 AACCAGCCATCCTGGCAGCGCTCAA--ACACTAAAAACATCTCCCCTTTTCTCAGCTCTAGTTCATCCTCTTTCCGAGGAGTGTATGGATATATAGCAACATACCTAGAATAGAAAATAATATTTGATTTCA chr4 + 94230402 62934779 62934778 62934907 62934779 62934778 62934907 129 AACCATCCATCATCACATTTTTCCATCACATCAATGACATCTCCC--TCTCTCAGCTCCAATTCATCTTCGTTCCTAGGAGTATAGTTATATAGAGCCTGAAACCTTAAATAGGACA-AATGTTGCATTTTA .....x.....x.x:..x:x:..x.--...::..x:.........--.:.........:.:......:..x....x......:..xxx.....x...xxx.x....x:.....:.x.-...:..xx....:. 25M2I18M2D70M1D14M 91/127 71.7% 129/94230402 0.0% 5/127 3.9% 106186109 84028446 +3525 chr4 + 190214555 169133642 169133641 169133719 78 GTGGTGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-.:.x....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 6M1D71M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 93100441 NA +3020 chr4 + 190214555 169141073 169141072 169141114 42 CCAGGGAAGCCAAAAGATTGGACACCCTTGGTATAGAACATT chr4 + 94230402 14824966 14824965 14825007 14824966 14824965 14825007 42 CCAGAGAAGCCAAAAGGTTGGACACCTGTGATGTAAAACATT ....:...........:.........:x..:.:..:...... 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 154316107 35898448 +3026 chr4 + 190214555 169155478 169155477 169155556 79 ACCTCAACATATGAAATTGGAAATATTCCTATTTTGTCTGCCAGCATTCCTTCAGCCCAGTTTTCATCCACTCTTCGGA chr4 + 94230402 62951763 62951762 62951841 62951763 62951762 62951841 79 ACCTCAACATAAGAAATTGGGAAAATTCCAACTCTTCCATGGTGCTCACCTTCATACCAGTTTTGATCAATTTTCCTGA ...........x........:..x.....x.:.:.x:.xxxxx..x:x......xx........x...x.:.:.:.x.. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 106203715 84010840 +3765 chr4 + 190214555 169169461 169169460 169169539 79 GTGGTGCATACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x......:...........::........x.xx.xx..x.............:..x:xx:..:..:.. 8M2D69M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 93136260 NA +3259 chr4 + 190214555 169178101 169178100 169178183 83 CATGGTGGTGGGCACCTGTAACCCCAACTACTCAAGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGTGGAGTTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:::...:.....::.:........x.xx:x...x.:...........:..x.xx:.x:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 93144904 NA +3124 chr4 + 190214555 169185419 169185418 169185465 47 CTGCCCAGAAAAAACAAAACAAACAAACAAACAAAAAACCCACAAAA chr4 + 94230402 22392448 22392447 22392494 22392448 22392447 22392494 47 CTATTTAAAAAAAACAAAACAAACAAACAAAAAAAAAAACCACCAAA ..::::.:.......................x......x....x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 146792971 43421584 +3641 chr4 + 190214555 169197486 169197485 169197553 68 CGTGGTGGTGCCCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.......x.x....:.:.........::::........x.xx.x...x.:...........:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 93164289 NA +3807 chr4 + 190214555 169239893 169239892 169239966 74 GTGCACTTATACTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACTCAGAAGTCAGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:..x.:...........::........x.xx.x...x.x.......:......::xx:.....:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 93206689 NA +3185 chr4 + 190214555 169255580 169255579 169255633 54 CATGTGCATATGCATGGATACATACACACATACATACACACATACACACACACA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ......::......::x.:.:x..::x.....::.................... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 146007859 44206696 +3159 chr4 + 190214555 169256242 169256241 169256312 71 GAAAGGGAGGGAGGCAGGGAGGGAGAGAGAAAGGGAGAAGGGAGGAAGAAAGGGAGGAAGGGAAGGAGGAA chr4 + 94230402 88620733 88620732 88620803 88620733 88620732 88620803 71 GAAAGGGAAGGAAGCAGAGAGGAGGAGAGCGATGAGGACAGAAGGAGATTAGCGAGGAATGCAAGGCTGAA ........:...:....:....::.....x:.x.::..x:.:....::xx..x......x.x....xx... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 80635509 NA +3109 chr4 + 190214555 169273045 169273044 169273101 57 TCTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTATTGCCCAG chr4 + 94230402 26035932 26035931 26035988 26035932 26035931 26035988 57 TCTTTTCCTTTCTTTCTTTTTTTTTTTTTTAAACTTGGTATCAGTCATATAGCCGAG .......:.......:.............x.:..xx:..x...x..x...x...x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 143237113 46977442 +3589 chr4 + 190214555 169284192 169284191 169284275 84 ACATGGTGGTGTGCGCCAGTAGTCCTAGCTACTCAGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::......::..:--.....:.:.......::::........x:xx.x.:.x::.....:.....:..:..x:.....:.. 16M2D66M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 93250996 NA +3097 chr4 + 190214555 169284504 169284503 169284581 78 TTTCTTTTCTTTTTCTTTCTTAATTTTCTTTTCTTTTTTTTCTTTCTCACTCTGTCTCCCAGGCTGGAGTGCAGTGGC chr4 + 94230402 46887360 46887359 46887437 46887360 46887359 46887437 78 TTTCTTCTCCTTTTATTGTTTTGTTTTCTTTTTCTCTTTTTCTTATTCATCTTAGCCTTCATCCCAAAGTGCAAAAGC ......:..:....x..x:..x:.........::.:........x:...:::.:x.:::..xx.:::......:x:.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 122397144 67817411 +3114 chr4 + 190214555 169285159 169285158 169285225 67 ATGTGTATATATGTATGTATGTGTGGTTATATACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:....:xx.....::.:x..x:x...x...:..........:.........::..:::.:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 141959668 48254887 +3324 chr4 + 190214555 169292267 169292266 169292320 54 TGTAACCCCAGCTACTTGGGAGGCTGAGGCGTGAGAATCACTTGAACCCTGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:::...........::........x.x..x...x...........x.:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 93259056 NA +3258 chr4 + 190214555 169296984 169296983 169297078 95 GTCATGCACCTGTAATCCCAGCTACTCAGGAGGCGGAGGCAAGAGAATCACTTGAACCTGGGAGGTGGAGGTTTCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..x:.....x....:.:.........::::....x...x.xx.x...x..........::.:..x.xx:..:.x:..------..x..x...... 77M6D12M 62/89 69.7% 89/94230402 0.0% 6/89 6.7% 93263783 NA +3721 chr4 + 190214555 169312455 169312454 169312555 101 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::......--...x......:.........:.::........x.xx.x...x.:........::.:..x.xx:..:..:..------:.x...:..... 10M2D71M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 93279258 NA +3181 chr4 + 190214555 169328919 169328918 169328988 70 CATGGTGGCGAGCACCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x..:.:.:...........::........x.xx.x...x.x........::.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 93295722 NA +3013 chr4 + 190214555 169329790 169329789 169329842 53 CACCCAGCCCAGAGTAATTTTCCTAAAATGCAAACTGTTTAAATGCCTTGAAT chr4 + 94230402 27619599 27619598 27619651 27619599 27619598 27619651 53 CACCTATTCCAAGGCAGTTTTCTTTAAATGCAAACTGTAGAAATGTCTTGAGT ....:.x:...::.:.:.....:.x.............xx.....:.....:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 141710191 48504364 +3270 chr4 + 190214555 169349252 169349251 169349329 78 ATATATATACACGTGTATATATATGTGCGTATATATGTACATATATATACACATATGCATATGTATA----TGTATACACAT chr4 + 94230402 66286785 66286784 66286866 66286785 66286784 66286866 82 ATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTTAT ..:...:.:x..:.x.:x.......x..::...:....:.....x.::....x.:.....:....:.----.....:.x:.. 67M4I11M 55/78 70.5% 82/94230402 0.0% 4/78 5.1% 103062467 87152088 +4021 chr4 + 190214555 169349257 169349256 169349358 102 TATACACGTGTATATATATGTGCGTAT--ATATGTACATATATATACACATATGCATATGTATATGTATACACA----TATGCATATGTATATGTATACACAAACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......:....:.x.x.:..x......--........x:.:......x.:.:.:.x...:::......:x..::----.:..:......:....x...::..x:..:. 27M2I45M4I30M 72/102 70.6% 108/94230402 0.0% 6/102 5.9% 148240063 41974492 +3414 chr4 + 190214555 169349302 169349301 169349403 102 ACATATGCATATGTATATGTATACACATATGCATATGTATATGTATACACAAACATATATATATACACATATATATGTATATATATATAAAATATAGTTTGG chr4 + 94230402 6083150 6083149 6083246 6083150 6083149 6083246 97 ATATATGCTTCTCCCTATATATG-----GTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTAAAAAAAAAAAAAAAAAGGTTTAG .:......x.x.x:x...:...:-----:..::.:...:.::.:.....................:.:x:x..:.....x.x.x.x.x....x.x:....:. 23M5D74M 66/97 68.0% 97/94230402 0.0% 5/97 5.2% 163266152 26948403 +3122 chr4 + 190214555 169349304 169349303 169349377 74 ATATGCATATGTAT-----ATGTATACACATATGCATATGTATATGTATACACAAACATATATATATACACATATATAT chr4 + 94230402 92344693 92344692 92344771 92344693 92344692 92344771 79 ATTTGAATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ..x..x....x...-----..:........x..x...........:.:......:.x::.:xxx.:....:..:..... 14M5I60M 55/74 74.3% 79/94230402 0.0% 5/74 6.8% 77004611 NA +3122 chr4 + 190214555 169349304 169349303 169349377 74 ATATGCATATGTAT-----ATGTATACACATATGCATATGTATATGTATACACAAACATATATATATACACATATATAT chr4 + 94230402 92341552 92341551 92341630 92341552 92341551 92341630 79 ATTTGAATATCTATGCAAAATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ..x..x....x...-----..:........x..x...........:.:......:.x::.:xxx.:....:..:..... 14M5I60M 55/74 74.3% 79/94230402 0.0% 5/74 6.8% 77007752 NA +3323 chr4 + 190214555 169357438 169357437 169357511 74 GTACACCTGTAGACCCAGCTACCTGAGAGGCTGAGGTGGGAGGACTGCTTGAGTCTAGGAGTTTGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x.....x:........:...:........x:xx.x.:.x::.....::.:..:..:..x:.:...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 93324234 NA +3394 chr4 + 190214555 169358748 169358747 169358824 77 GTGGCACGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCAGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::.::x....:.:...........::........x.xx.x...x.x........x:.:..x:xx:.....:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 93325547 NA +3181 chr4 + 190214555 169363184 169363183 169363244 61 GTGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGACAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:.:.........::........x:xx.xx..x.:...........:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 93329980 NA +3185 chr4 + 190214555 169367821 169367820 169367903 83 CGTGGTGGTGAGCACCTGTAGTCCCAGCTACTGGGGAGGTTGAGGCAGGAGAATCACTTGAACATGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x......:.........x.::...:....x.xx.x...x.........x::.:..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 93334624 NA +3703 chr4 + 190214555 169370658 169370657 169370730 73 TGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCGCTTGAACCCAGCAGGTGGACGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:...........::........x.:x.x...x.:...........x..x.xx:x.:..:.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 93337453 NA +3267 chr4 + 190214555 169370784 169370783 169370842 59 TCTTAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548415 85548414 85548473 85548415 85548414 85548473 59 TCTTCAAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ....x...........x.x.xx.....:...:.:.:.::...:..........x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 83822369 NA +3142 chr4 + 190214555 169370786 169370785 169370869 84 TTAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 22600189 22600188 22600272 22600189 22600188 22600272 84 TTCAGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG ..x.::..:.x.x.:....x:.:..::.x.:.:..::...:.x.x....:.....x.........:.:..::..:::..:x... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 146770597 43443958 +3032 chr4 + 190214555 169370788 169370787 169370838 51 AAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548423 85548422 85548473 85548423 85548422 85548473 51 AAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ..........:.xx.....:...:.:.:.::...:..........x..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 83822365 NA +3131 chr4 + 190214555 169370788 169370787 169370840 53 AAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548421 85548420 85548473 85548421 85548420 85548473 53 AAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT ............x.xx.....:...:.:.:.::...:..........x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 83822367 NA +3166 chr4 + 190214555 169370791 169370790 169370871 81 AAAAAAAAATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 22600192 22600191 22600272 22600192 22600191 22600272 81 AGGAAGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .::..:.x.:.:....x:.:..::.x.:.:..::...:.x.x....:.....x.........:.:..::..:::..:x... 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 146770599 43443956 +3000 chr4 + 190214555 169370817 169370816 169370863 47 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x..:.......x...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 162513207 27701348 +3131 chr4 + 190214555 169370819 169370818 169370865 47 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x..........x...........x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 162513209 27701346 +3009 chr4 + 190214555 169370821 169370820 169370867 47 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::....x:.........x...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 162513211 27701344 +3037 chr4 + 190214555 169372420 169372419 169372481 62 TAATAGAGGAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAGACAAGGTCTC chr4 + 94230402 33767101 33767100 33767162 33767101 33767100 33767162 62 TATTAAAAACAGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAACTCTC ..x..:.::x....:..x:.:.............x..........xx....:.::.:x.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 135605319 54609236 +3069 chr4 + 190214555 169389418 169389417 169389497 80 TTTCTTCATCATGGGCAGAAGTGTGAGTCAGACTTCATTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 14401505 14401504 14401572 14401505 14401504 14401572 68 TTTCTTCATC-----------TGT-AGCCATAATCCACTTTTTTTCCCCCCTTTTTTCTTTTTCTTTTTTTTTTAAGAGA ..........-----------...-..:..x.x.:..:..:......::::......:.....:..........xx.... 10M11D3M1D55M 54/68 79.4% 68/94230402 0.0% 12/68 17.6% 154987913 35226642 +3116 chr4 + 190214555 169396343 169396342 169396403 61 GCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAT chr4 + 94230402 88382708 88382707 88382768 88382708 88382707 88382768 61 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAAT ..:.x:.........xx.x.........::.:..............:x.x.:...x.x... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 81013635 NA +3287 chr4 + 190214555 169399116 169399115 169399187 72 GCACCTGTAGGCCAAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.....x:.x.......::::........x.xx.x...x.............:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 93365910 NA +3478 chr4 + 190214555 169399441 169399440 169399518 78 GTGGCGCACGCCTATAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAGCCCAGGGGGTGGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.....--.:..:.:.......:...::........x.xx.x...x.......:.....::.x.xx:..:..:. 10M2D66M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 93366240 NA +3413 chr4 + 190214555 169409638 169409637 169409710 73 TGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAACCTAGGAGGCGGAGGTTGTAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:...........::........x.xx.x...x::...:....:..:..x:xx:..:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 93376433 NA +3191 chr4 + 190214555 169445803 169445802 169445895 93 AAACATGCACATGCACCCACTAAACTTAAAACAAAACAACTATATACATATATATATATATATACACACACACACACACACACATGCACAAAA chr4 + 94230402 43671805 43671804 43671897 43671805 43671804 43671897 93 AAACTTCTATATTTTTCTGTAAATCTTATTAAAAAAAACTTTTCTCTGTCTATACATGTATACACATGCACACACACAAACACATGCACTAAA ....x.x:.:..x:x:.:::x..x....xx.x....x.x:.x.x.x::.x....:..:....:...::..........x..........x... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 125773998 64440557 +3051 chr4 + 190214555 169445845 169445844 169445957 113 TATACATATATATATATATATACACACACACACACACACACATGCACAAAATGGACCATTATTCAGCCATAAAAAGAATGAAATCTTATTTTTTTGCAGTAAGATGGATAGAA chr4 + 94230402 4409082 4409081 4409181 4409082 4409081 4409181 100 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAG-------------CAGAAGAAACAAACAGAGAATTTTCTGCTCTTGCAACACAGCAGATATAA .:..................:.......x.x.........:x.x.x.x.:-------------...xx:x..x..:x.x::...:..x.x:.:.....::.x::::....x.. 50M13D50M 67/100 67.0% 100/94230402 0.0% 13/100 13.0% 165036763 25177792 +3005 chr4 + 190214555 169445847 169445846 169445887 41 TACATATATATATATATATACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .::.:.......................x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 165036765 25177790 +3963 chr4 + 190214555 169457600 169457599 169457777 178 AAGAAAGGGAGAAAAGGAGAAAAGGAGAAAGGGAGA----AAGAGAGAAAGTGCGGGGCAGGGGGAGAGAAGGAAGGAAGGAAGGAAGGAGAGAAAGAAGGGGGGAGGGGAGAAGGAGGGGAGAG-GGAGGGAAGAGGAG------------------GAGAAAGGAGAGGAGGGGAGGGGAGGGGAGGGAAGAAGACAGG chr4 + 94230402 17246059 17246058 17246249 17246059 17246058 17246249 191 AATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCA----------TTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGG ..x:...x:.x.:x..:...:..:..:.:x.:....----.:....x...:::..:.x.....x.::..xx...:..........:.::..xx.----------xx....:....:.:..x...:-..x:.......:..------------------.....:::...x:.::x...::..x.xx:.x.::.:....... 36M4I54M10D21M1I14M18I43M 108/168 64.3% 191/94230402 0.0% 33/168 19.6% 152211541 38003014 +3036 chr4 + 190214555 169457688 169457687 169457772 85 GAAAGAAGGGGGGAGGGGAGAAGGAGGGGAGAGGGAGGGAAGAGGAGGAGAAAGGAGAGGAGGGGAGGGGAGGGGAGGGAAGAAG chr4 + 94230402 75729032 75729031 75729116 75729032 75729031 75729116 85 GAAAGAGATGTGGCAGAGAGAAATTGTAGATGGAGTAAAGGGGGGAAAAAAAAGGAGGGGGGGGGGGGGGATGGAAAGGCAAAGG ......::x.x..x:.:.....:xx.x:..x:.:.x:::::.:...::.:.......:..:....:.....x..:.:..x.:.:. 85M 51/85 60.0% 85/94230402 0.0% 0/85 0.0% 93728656 NA +3380 chr4 + 190214555 169468846 169468845 169468914 69 GGAGGGTGTATATGTCCAGGAATGTATCTATTTCTTCTAGATTTACTAGTTTATTTGCATAGAGGTGTT chr4 + 94230402 77846764 77846763 77846832 77846764 77846763 77846832 69 GGAGGATCTGTATGCCCAAGAACGTATCCCTTTCTTCCAGATGTATCAGCTGGTTTACTGACAGGTATT .....:.x.:....:...:...:.....:x.......:....x..::..:.x:...:.xx.x....:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 91622082 NA +4068 chr4 + 190214555 169491013 169491012 169491085 73 TGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:...........::........x.xx.x...x.:...........:..x.xx:.....:.. 73M 56/73 76.7% 73/94230402 0.0% 0/73 0.0% 93457808 NA +3057 chr4 + 190214555 169491135 169491134 169491186 52 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGATGGAGAAAGGCACAGAA chr4 + 94230402 17691365 17691364 17691416 17691365 17691364 17691416 52 TCAAAAAAAAAAAAAAAAAAGAACACAAATAAACAGGGAGAAAGATACTGAA ....................:..x.x...x.:.x.x........::..x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 151799770 38414785 +3110 chr4 + 190214555 169524460 169524459 169524516 57 TCAAAAAAAAAAAAAAAAAAAGAAAAATGTTGAATGAAAAATGTCTCAGTCTATATA chr4 + 94230402 25264426 25264425 25264482 25264426 25264425 25264482 57 TTAAAAAAAAAAGCAAAAAAAGCAAAATATTACATAAAAAATATGTAAGTCTACTTA .:..........:x........x.....:..:x..:......:.x.x......:x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 144260034 45954521 +3482 chr4 + 190214555 169526248 169526247 169526431 184 GTAGACTGACATGGGAGGATAACTTGAAGCTAGGAGTTTGAGGCCAGCTTGGGCAACACAGCAAGACCTAACTCTACAAAAAGATTAAAAAATTAGCCACGCATGATGGCAAGCACCTATAGACCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCTAAAAGTGTGAGGCTGCAG chr4 + 94230402 76033115 76033114 76033277 76033115 76033114 76033277 163 GTAGACTGAAAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAA-------GTATGTAATGTCATGAAAGGATGATA------------CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........x.x:.....::.:xxx.x..:x.:..x.xx.::x.::.:.....x..-------:x.:x...:x::.::...:...x.x.------------..:::...:--....x.:...x:.........::::........x:xx.x.:.x.......:..:.:...:x.x:.....:.. 56M7D26M12D9M2D72M 100/163 61.3% 163/94230402 0.0% 21/163 12.9% 93493133 NA +3209 chr4 + 190214555 169540838 169540837 169540914 77 TATCAATAAATAATTATTCCAAGACAAACTTTCCTTTTTTTTTTTAGCCCTGACAAGAGAAGGGGAGGAAAAGGGAG chr4 + 94230402 6808183 6808182 6808259 6808183 6808182 6808259 77 TAATAATAAAAGACTCATTTAAGACACAAATTCATTTTTTTTTTTATCCTTAAAAAAACAAAGAGAAGAAAAAGAAG ..x:......x:.:.xx.::......x.xx...x............x..:.:.x..:.x..:.:..:.....:.:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 162732655 27481900 +3213 chr4 + 190214555 169577618 169577617 169577696 79 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--......:...........::........x.xx.x...xx:.x.........:..x.xx:.x:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 93544417 NA +3088 chr4 + 190214555 169610263 169610262 169610337 75 AAATGCTGGGAATACAGGTGTGAGCCACAGCGTCTGACCCAGAATTTCTTTCTTTTTTTCTTTTTTCTTTGAGAC chr4 + 94230402 60303313 60303312 60303387 60303313 60303312 60303387 75 AGATGATGGATGTACATCTATGCAGCACAGATGCAAACCCAGAAGTTCTTTTTTTTTTTTTTTCCTCTTCAAAAC .:...x...:x:....xx.:..x:x.....xxx.x:........x......:.......:...::....::.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 109306950 80907605 +3111 chr4 + 190214555 169637567 169637566 169637613 47 CTCAAA---AACCAAACAAACACCACCACCACCAACAACAACAACAAAAA chr4 + 94230402 42911769 42911768 42911818 42911769 42911768 42911818 50 CTCAAATCCAAAAAAACCACCACCACCACCACCAACAACAACAACAAAAA ......---..xx....x.x.............................. 6M3I41M 43/47 91.5% 50/94230402 0.0% 3/47 6.4% 126725798 63488757 +3014 chr4 + 190214555 169637571 169637570 169637613 43 AAAACCAAACAAACACCACCACCACCAACAACAACAACAAAAA chr4 + 94230402 42575025 42575024 42575067 42575025 42575024 42575067 43 AAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAA ....xx....x.x...........................x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 127062546 63152009 +3229 chr4 + 190214555 169663098 169663097 169663224 127 TAATTGTTTCATTCAGAGTGAGCATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTGCGTATATGTGTATATATATATATACA---------TATACACACACATATGGCACTCCTAGGTG chr4 + 94230402 79265497 79265496 79265625 79265497 79265496 79265625 129 TAGCTGTCCTATTCAG--TCAACA-----GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTG ..::...:::......--.x.:..-----.............::........xx.:.....:::.::::...:.:.:.:.::x.:....x.:.:.x..---------....:.x.::..:x.x..x:.::.::... 16M2D6M5D69M9I29M 76/120 63.3% 129/94230402 0.0% 16/120 13.3% 90397601 NA +3469 chr4 + 190214555 169663121 169663120 169663205 85 ATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTGCGTATATGTGTATATATATATATACATATACACACA chr4 + 94230402 85834534 85834533 85834614 85834534 85834533 85834614 81 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAA----TACATGTTTATGCACACATACACACA ..x:..x.....x...................xx..:.:x.::.:::.::...x.----..:..:.x...::...:......... 55M4D26M 58/81 71.6% 81/94230402 0.0% 4/81 4.9% 83828587 NA +3651 chr4 + 190214555 169663122 169663121 169663208 87 TATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTGCGTATATGTGTATATATATATATACATATACACACACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCAT----ACATATGTAAATACATGTTTATGCACACATACACACAT ...x::.x.....x...............:...xx....:x.::.----::......:x...:..:.x...:..:.:.:........ 45M4D38M 60/83 72.3% 83/94230402 0.0% 4/83 4.8% 83828589 NA +3446 chr4 + 190214555 169663123 169663122 169663199 77 ATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTGCGTATATGTGTATATATATATATACATATA chr4 + 94230402 85834538 85834537 85834614 85834538 85834537 85834614 77 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x.....x.................:.xx..:..x.::.:::.:..::x...::...x...::.:.:.....:.:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 83828585 NA +3716 chr4 + 190214555 169663124 169663123 169663213 90 TATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTGCGTATATGTGTATATATATATATACATATACACACACATATGGC chr4 + 94230402 85834533 85834532 85834618 85834533 85834532 85834618 86 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTA----TTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGC ...x::.x.....x.............:.:..----.xx:...:x..:..:..:....x...:..:.x..:::.:...:.....:..... 32M4D54M 61/86 70.9% 86/94230402 0.0% 4/86 4.7% 83828591 NA +3006 chr4 + 190214555 169663302 169663301 169663348 47 TAAGTGGGTTTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTT chr4 + 94230402 14999522 14999521 14999568 14999522 14999521 14999568 47 TATGTGGGTTTTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTT ..x........................:.....xx.x.xx....... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 154663780 35550775 +6652 chr4 + 190214555 169680014 169680013 169680219 206 CTAAAACATACTCATCTTT---CCTTTTCTCTTCTGTAGGAACTCATTATACAATGACAAATGGAGGCAGCATTAACAGTTCTACACATTTACTGGATCTTTTGGATGAACCAATTCCAGGTGTTGGTACATATGATGATTTCCATACTATTGATTGGGTGCGAGAAAAATGTAAAGACAGAGAAAGGCATAGACGGGTAAGTGTTTTT chr4 + 94230402 9646968 9646967 9647171 9646968 9646967 9647171 204 CTGAGAAATGCTCAATTTTTCCCCCTTACTTTCCCACCAGGCTTTACCTCATAT-----AATGGAGGAGGGATGAACGGCACAAGCAAAATGATGGATTTTCTGGAGGAACCACTTCCTGGTGTGGGGACCTATGAAGATTTTAACACTATAGATTGGGTGCGAGAGAAGTCCAGGGACCGGGACAGGCACAGAGAGGTAACTTTTTTT ..:.:.x..:....x:...---..:..x..:.:.:::x:.:x:.:.::x:.:.x-----........x:.x..x...:.:x.x.xxx.xx.:x.....:..:....x......x....x.....x..x..x.....x.....:x.:.....x..............:..:.x:.::...x.:..x.....:...x:.....x.x..... 19M3I32M5D150M 134/201 66.7% 204/94230402 0.0% 8/201 4.0% 160033046 30181509 +6698 chr4 + 190214555 169689040 169689039 169689234 195 TAGGGGCACTGGCCGGATTAATAGACATTGCTGCCGATTGGATGACTGACCTAAAGGAGGGCATTTGCCTTAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTGGGGATCTAATGAAACAACATTTGAAGAGAGGGATAAATGTCCACAGTGGAAAACATGGGCAGAATTAATCATAGGTCAAGCAGAGGTAA chr4 + 94230402 9650554 9650553 9650745 9650554 9650553 9650745 192 TAGGTTCCTTAGCAGGTCTGATAGACATTTCTGCCCACTGGATGACAGATCTGAAAGAAGGAGTGTGTTTAGCAGGCTTCTGGTTTAACCACGAGCACTGCTGCTGGAAGTCCAAC---ACAACCTTTACAGACAGAGACAAGTGTCCTGAATGGATGAGCTGGTCGCAGCTTATTATTGGCCATGGGGAGGTAA ....xx.x:.:..x..x:.:.........x.....x.:........x..:..:..:..:..x:.x..::.x:xx.xx..x....x:........:..x.....:...:::..:..:---.....x...:x...x..:..:..:.....xx.:....x:.xx...x.:x.::.x..:..x..:..x.x:....... 116M3D76M 127/192 66.1% 192/94230402 0.0% 3/192 1.6% 160038486 30176069 +6828 chr4 + 190214555 169690483 169690482 169690657 175 GGTGCAATGTAAATTAAATTCATACTCTCGAACT------ATTTTCTTTTT-AGGGTCCTGGTTCTTATATCATGAACTACATAATGTACATCTTCTGGGCCTTGAGTTTTGCCTTTCTTGCAGTTTCCCTGGTAAAGGTATTTGCTCCATATGCCTGTGGCTCTGGAATTCCAGAGGTAAG chr4 + 94230402 9651255 9651254 9651436 9651255 9651254 9651436 182 GGTTTGATGTAAGCTTAATTGGTTGACTTGAAATTGGTTAACTTTCTCTTTCAGGGTGCTTTTGCATATATTCTCAACTACTTCATGTATGTTATCTGGGCTTTGTTATTCTCTCTTCTTGCTGTGTTACTTGTGAAGGGCTTTGCTCCTTATGCCTGTGGCTCAGGAATCCCAGAGGTGAG ...x::......::.x....x:.xxx..:...x.------.:.....:...-.....x..xx.x.x.....:x.x......x.x.....::.:x.......:...xxx..:x.::.......x..x.:x..x..:....xx........x..............x.....:........:.. 34M6I11M1I130M 126/175 72.0% 182/94230402 0.0% 7/175 4.0% 160039228 30175327 +12175 chr4 + 190214555 169692103 169692102 169692324 222 TTGCCTTGTAGATTAAAACTATTTTAAGTGGATTCATCATCAGAGGTTACTTGGGAAAATGGACTTTAATGATTAAAACCATCACATTAGTCCTGGCTGTGGCATCAGGTTTGAGTTTAGGAAAAGAAGGTCCCCTGGTACATGTTGCCTGTTGCTGCGGAAATATCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACGAAGCTAAAAAAAGGGAGGTAA chr4 + 94230402 9651991 9651990 9652212 9651991 9651990 9652212 222 TTGACTTCCAGATCAAAACTATCTTAAGTGGTTTCATCATTAGAGGCTACCTGGGCAAGTGGACGCTGATCATCAAAACCATTACCTTAGTGTTGGCGGTGTCCTCTGGCCTGAGCCTGGGAAAAGAGGGCCCCCTGGTGCACGTTGCCTGCTGCTGTGGAAACATCCTGTGCCATCTCTTCACCAAATACAGGAAGAATGAAGCGAAGCGCAGAGAGGTAA ...x...x:....:........:........x........:.....:...:....x..:.....x:.:..x..:........:..x.....x:....x...x.x..x..::....::.:........:..:........:..:........:.....:.....:...:.x.x.:.:.....:x.x..:..:..x.x:..:.....x..:x:x..:....... 222M 166/222 74.8% 222/94230402 0.0% 0/222 0.0% 160040112 30174443 +6181 chr4 + 190214555 169695511 169695510 169695695 185 TTCAGAAAATCCATTTGGAAAATTCAAGTAACATGAAGAATTTTTATTTGGTATGTTTGAATTTCTATGAAATTATGAAATAAGCCATATCCTCTTTC-TAGGTGCTATCAGCTGCCTCAGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTTTTTAGCCTGGAAGAGGTA chr4 + 94230402 9653344 9653343 9653509 9653344 9653343 9653509 166 TTAAGTAAAGACATCTAACAAA-------AAAGTGGAAAGTTTTTGATGGGGAT-------------TGAAAACATGTGACTGACTTCAGTTTTTCTCACAGGTTTTATCAGCAGCTGCAGCTGCTGGTGTGTCTGTAGCTTTTGGTGCACCGATTGGAGGAGTGCTCTTTAGTCTGGAAGAGGTA ..x..x...xx...:.::x...-------..x:..:.:.:.....:x.x..x..-------------.....x:...x:.:x::.:x:.x::.:.:..-:....x:.......x..:x.......x..x..x....................:...........x..:.....:............ 22M7D25M13D31M1I87M 119/165 72.1% 166/94230402 0.0% 21/165 12.7% 160042167 30172388 +24696 chr4 + 190214555 169697166 169697165 169697739 574 TCTTTTCCTTTTCTTTTTTTTAGGTTAGCTATTATTTTCCTCTCAAAACTTTATGGAGATCATTTTTTGCTGCTTTAGTGGCTGCATTTGTTTTGAGGTCCATCAATCCATTTGGTAACAGCCGTCTGGTCCTTTTTTATGTGGAGTATCATACACCATGGTACCTTTTTGAACTGTTTCCTTTTATTCTTCTAGGGGTATTTGGAGGGCTTTGGGGAGCCTTTTTCATTAGGGCAAATATTGCCTGGTGTCGTCGACGCAAGTCCACGAAATTTGGAAAGTATCCCGTTCTGGAAGTCATTATTGTTGCAGCCATTACTGCTGTGATAGCCTTCCCTAATCCATACACTAGGCTAAACACCAGTGAACTGATCAAAGAGCTTTTTACAGACTGTGGTCCCCTGGAATCCTCTTCTCTTTGTGACTACAGAAATGACATGAATGCCAGTAAAATTGTCGATGACATTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAGCTATATGGCAGTTATGCCTGGCACTCATATTTAAAATCATAATGACAGTATTCACTTTTGGCATCAAGGTAAG chr4 + 94230402 9654371 9654370 9654941 9654371 9654370 9654941 571 TCTGCTTTGTTTTTCCTTTTTAGGTCAGTTACTATTTTCCTCTCAAGACACTGTGGCGCTCCTTCTTTGCTGCTCTGGTAGCTGCATTTACTCTGCGTTCCATCAATCCTTTTGGGAACAGCCGCCTGGTTCTCTTCTACGTGGAGTTCCACATGCCATGGCATCTTCTGGAGCTTGTGCCATTCATCCTTTTGGGAATTTTTGGTGGGCTCTGGGGAGCTTTCTTCATTCGCAGCAACATTGCCTGGTGCAGGCGACGCAAGACAACCAAGCTTGGTAAATACCCCGTGCTTGAGGTGTTTGTAGTTACTGCCATCACAGCCATCCTGGCCTTCCCGAACGAGTACACCAGAATGAGCACCAGTGAGCTGATCTCTGAACTCTTCAATGACTGTGGGATTTTGGACTCTTCCAAGCTCTGCGAGTATGTGAATGATTTCAACAGCACCAAA---GGGGATGACCTGCCAGACCGAGCTGCTGGCCCAGGAGTTTACACAGCCATGTGGCAGCTGGCTTTGGCCCTTATAATGAAAGTCTTCATCACAATCTTCACCTTTGGCATGAAGGTGAG ...x:.::x...:.::.........:..:..:..............:..x:.:...x.x..x..:.........:.:..:.........::.:..x.x...........x.....x........:.....:..:..:..:.......x:..:.::......:.:...:.x..:..xx.x..x..:..:...:.:..::.x.....x.....:........:..:......x.x:xx..:...........:x.x.........x.x..x..::....x..:..:.....x..x..:..xx..:.x...:.x.....:..x..::.xx.:........x..:xx:.....:..:x.:.:.........:......xxx..:..:..:.xx........xx:::....x..:..:xxx..:..:..x..::x:.....:x.x..::x..x:...---.xx......x.x..x..:..xx.x..x...x:x.....x..:x....:..:......:.:xx::....x..:...x.x...:..x.x..x...:.x.....:........x.....:.. 452M3D119M 397/571 69.5% 571/94230402 0.0% 3/571 0.5% 160042795 30171760 +3029 chr4 + 190214555 169699889 169699888 169699932 44 AATAATAAGAAGAAAATAATAATAGTAATAGAAAAGCCTAAACA chr4 + 94230402 23549464 23549463 23549507 23549464 23549463 23549507 44 AATACTAAGAAGAAAACAGTAATAATAATAAAAAAACCTCAACA ....x...........:.:.....:.....:....:...x.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 146150425 44064130 +3152 chr4 + 190214555 169703643 169703642 169703742 100 TATTGTATCCAGCATATTGTCCTTTTTTTTTTCTTTTTTTTTTTTCATTTCACCATGGACTAATGAAAATTTTGTTAGGGACTGACATTAGGGCACCCTT chr4 + 94230402 81088314 81088313 81088413 81088314 81088313 81088413 100 TATTGTGTTCAATTTTCTGTTCCTTTTTCTTTCTTTTTTTTTTCTCCACAGTCCACAGAATTCAGAATATGATTTTAGGCAAAGAGATTAAGATGCCTTT ......:.:..::x.x:...:.:.....:..............:..xx:xxx...::..x.xxx...x..xx.x.....x.xx..x....:.:::..:.. 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 88615329 NA +9612 chr4 + 190214555 169703989 169703988 169704188 200 TTGTTATAGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGGATTGCGGTGGAGCAGCTTGCCTACTATCACCACGACTGGTTTATCTTTAAGGAGTGGTGTGAGGTCGGGGCTGATTGCATTACACCTGGCCTTTATGCCATGGTTGGTGCTGCTGCATGCTTAGGTAA chr4 + 94230402 9655698 9655697 9655897 9655698 9655697 9655897 200 TTTTCATAGGTCCCTTCAGGTCTCTTCATCCCAAGCATGGCAGTCGGTGCTATAGCAGGCAGGTTGCTAGGGGTAGCAATGGAGCAGTTAGCATTTTACCACCATGACTGGATCATCTTCAGTGGCTGGTGCAGTCAAGGAGCTGACTGTATCACTCCCGGCCTGTATGCAATGGTTGGGGCTGCAGCATGTCTAGGTAA ..x.:......:..x.....::.x........x........x:.:..x..x..x.....x...x.xx.:...:.x..::........:.x..x.x:..:.....:......x.:.....:.:x.:x.....:::xxxx..:.....:..:..:..x..:.....x.....x........x.....x.....::....... 200M 144/200 72.0% 200/94230402 0.0% 0/200 0.0% 160048291 30166264 +21447 chr4 + 190214555 169706852 169706851 169707269 418 TGCTTACTTTTTTCAGGTGGTGTGACAAGAATGACTGTCTCCCTGGTGGTTATTGTTTTTGAGCTTACTGGAGGCTTGGAATATATTGTTCCCCTTATGGCTGCAGTCATGACCAGTAAATGGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATGAAGCACACATCCGATTAAATGGATACCCTTTCTTGGATGCAAAAGAAGAATTCACTCATACCACCCTGGCTGCTGACGTTATGAGACCTCGAAGGAATGATCCTCCCTTAGCTGTCCTGACACAGGACAATATGACAGTGGATGATATAGAAAACATGATTAATGAAACCAGCTACAATGGATTTCCTGTCATAATGTCAAAAGAATCTCAGAGATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAATTGCAATAGGTA chr4 + 94230402 9656628 9656627 9657045 9656628 9656627 9657045 418 TGTGTTCTTTTTGTAGGTGGGGTGACCCGAATGACTGTGTCACTAGTGGTCATTATGTTTGAGCTCACTGGTGGACTGGAGTACATAGTTCCTCTGATGGCAGCAGCCATGACCAGCAAGTGGGTGGCAGATGCTATTGGGCGGGAGGGCATTTACGATGCCCATATACGCCTCAATGGCTATCCTTTCTTGGAAGCCAAGGAAGAGTTCTCACACAAGACACTTGCAATGGATGTAATGAGGCCACGGAGGAATGATCCTCCTCTGACTGTCATCACTCAGGACAGCATGACAGTAGAAGACATTGAGACCATAATCAATGAAACCACCTACAGTGGCTATCCAGTGGTGGTGTCACGGGAGTCCCAAAGGCTTGTTGGATTTGTCCTCAGGAGAGACCTCATCATTTCAATTGGTA ..:x.x......x:......x.....xx..........x..x..:.....:...:.x........:.....x..x:....:..:..x.....:..x.....x....:.........:..:.....x.x......:x....xx....:........:..x..x..:..x..x:.x.....x..:...........x..x..:.....:...x.x..:.xx..x..x..x::x..:..x.....:..x..:..............::.::.....x.x..x.......::........:..x..:..x..:.x...:..:..........x.....:...x.x...x..x:.::.....x::..:..:..:..::.x..x.......:......:........x.:x...x....x.... 418M 311/418 74.4% 418/94230402 0.0% 0/418 0.0% 160050224 30164331 +3429 chr4 + 190214555 169709549 169709548 169709627 79 GTGACGCATGCCTATAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::...:.--.:..:.............::........x.xx.x...x..........::.:..x.xx:.::..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 93676348 NA +9898 chr4 + 190214555 169713066 169713065 169713300 235 TCTCTCTTTTCAGAAAGTGCCAGGAAAAAACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCAT--TGAAGCTTCGAAGCATTCTTGACATGAGCCCTTTTACAGTGACAGACCACACCCCAATGGAGATCGTGGTGGATATTTTCCGAAAGCTGGGACTGAGGCAGTGCCTTGTAACTCACAATGGGTAAG chr4 + 94230402 9658456 9658455 9658690 9658456 9658455 9658690 235 TTTCTTCTTCCAGAAAATGCCCGGAAGAAGCAAGATGGAATTGTGAGCACTTCAATTATTTATTTCACTGACCACTCTCCTCCACTGCCTCCA--AGCTCCCCCTCTATGCTGAAACTCAGGAGCATCCTGGACCTCAGTCCTTTCACGGTGACAGACCAAACACCTATGGAAATCGTTGTGGATATATTTCGCAAGCTTGGATTGCGCCAGTGCCTCGTTACTCACAATGGGTAAG .:...::..:......:....x....:..:.....x..x..:..x:...x...xxxx:.x.:...::.xx.x...x.:..x:.x..x..xx..--.:x...:.xx.:..--....:..:x.:.....:..x...x.x..:.....:..:...........x..x..x.....:.....x........x..:..x.....x...:..x.x........:..x................ 93M2D14M2I126M 168/233 72.1% 235/94230402 0.0% 4/233 1.7% 160054610 30159945 +3229 chr4 + 190214555 169737150 169737149 169737232 83 CATGGTGGTGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x::.--.:..:.:...........::........x.xx.x...x.:........::.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 93703953 NA +3056 chr4 + 190214555 169742663 169742662 169742721 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 93709457 NA +10266 chr4 + 190214555 169748975 169748974 169749264 290 CATACCAGAATTTATCGATTACATCAAACAAAAATTTCTGTAATGGAAAA--GGCAAGTTGCAGTCATAAAAGATGGCATTCACATTCA-------TTTTAGAAAGCAACAACGTAGATGTAAAAAATTG--TTTAAGTG--AAAAATGTAATATTGCAGTCCCATTTTGC-------AAGCTGAAAA---ATTTTGTCA--ACACACATAAAATCTGCACATTTACATACTGCATGTT---------AAAAAATTCCATCACTAAAGTATT--ATAAATATTGCAAAGTTAGGCTTAAATTTATACTGTTGCTGGTGTATATGTA chr4 + 94230402 5093889 5093888 5094208 5093889 5093888 5094208 320 CATACCAAAGTTTATTGATTACTTCAAACATAAGTTTCCGTAATGAAAAAAGAGCAAGTTGCATTCATAAAAGGTAACATTCACATTCAATTTCTTTTATATAAAGCAACA---TAAATGTATAAAATTGCATTAAAGTGAAAAAAATGTAAGGTCGCAGTCCTTTTTTTTTTGCAAGAAGCTGAAAATGTATCTTCTCATTGCCTGTATATAATTTACACTTCTATACACTATATGTTTGTATTTAAAAAAAAATCCATAGCTGGGAAATTGGATGAATGGTGCAGTATTAGGTAAGGTTTTCAACTGT---AAGTGTATATACA .......:.:.....:......x.......x..:....:......:....--:..........x.........:.::............-------..x..x.........---..:.....x.......--..x.....--..........x:.:.......:x....x:-------..........---..:..x...--:.x:::...x...:.:...x.:..:.:...::.....---------......x.....x:..::::x...--..:...:x....:x:.....:xx::x...xx.....---x:........::. 50M2I37M7I15M3D16M2I8M2I29M7I10M3I9M2I37M9I24M2I36M3D13M 217/284 76.4% 320/94230402 0.0% 42/284 14.8% 164655086 25559469 +3058 chr4 + 190214555 169749666 169749665 169749754 89 TAATGGAACCTAAAACTAAGATTCTTAGGACCTAGTTGCTTTTATACTCAAATACAAAAAAAAAAAAAAAGGAAAAACAAGAAAAAGGA chr4 + 94230402 48866463 48866462 48866535 48866463 48866462 48866535 73 TAAAGTAATCTACAGCTGGGAATCTT----------------TTTACTCAGATCCAAAAAAAAAAAAAAAAGAGGAACACAAGAAAGAA ...x.x..:...x.:..::..x....----------------.x......:..x................:..::....x:.:....:. 26M16D47M 55/73 75.3% 73/94230402 0.0% 16/73 21.9% 120883203 69331352 +3530 chr4 + 190214555 169760805 169760804 169760887 83 CATGGTGGCACGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGATACAAGAATCACTTGAACCCGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.::.--......::..........::........x:x::x...x...........:.:..x:xx:..:..... 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 93727608 NA +3284 chr4 + 190214555 169772027 169772026 169772109 83 CGTGGTGGTGCGTGCCTGTAATTCCAGCTACCTGGGAGGCTGAGGCACAAGAATTGCTTGAGCCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......::.--....:..........:..::........x.x::x...x::.....:...:.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 93738830 NA +3011 chr4 + 190214555 169773902 169773901 169773938 37 CAAAAAACAAAAAAACAAAAAAACAAAAACAAAAAAC chr4 + 94230402 27325826 27325825 27325862 27325826 27325825 27325862 37 CAAAAAACAAAAAAACAAAACAACAACAACAAAAAAC ....................x.....x.......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 142448076 47766479 +3002 chr4 + 190214555 169775628 169775627 169775688 61 TTTCCTTCCCTTTCTATCTCTCTCTCATTTTTTTTTTTTTTTTGACAGGGTCTCACTCTGT chr4 + 94230402 86518495 86518494 86518555 86518495 86518494 86518555 61 TTTCTTCCCCTCTCTTTCTCCCTCTCGTTTTTGTTGTATTCTTGACAAGCTTGAACTCCAT ....:.:....:...x....:.....:.....x..x.x..:......:.x.:xx....::. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 83257133 NA +3032 chr4 + 190214555 169796895 169796894 169796952 58 TTTTCTTTTTGTTTTTTTCTGTGTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGC chr4 + 94230402 15058715 15058714 15058772 15058715 15058714 15058772 58 TTTTCTTTTCATGTTTTGTTGTGTTTTGTTCTTTTTTTTTTTTCCTAAAGAATCCTAC .........::.x....x:........x..:............xxx.x...:..:.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 154738180 35476375 +3864 chr4 + 190214555 169797733 169797732 169797815 83 CATAATGGTGTGTGTCTGTAGTCCCAGCTACTCAGGAGACTGAGGCGGGAGGATCGCTTGAGCCCAGGAGTTTGAGGCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.:.....:::..--.....:.........::::..:.....x.xx.x.:.x.:.....:.....:..:..x:........ 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 93764536 NA +3179 chr4 + 190214555 169812212 169812211 169812283 72 GCACCTGCAGTCCCAGCTACTTGGGAGGCTGA----TGTGGGATTATCACTTGAGCCCAAGAGTTCAAGGCTACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGA----AGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x..:...:...........::.......----....:----.x.......:....::..:.:x:....::.. 32M4I5M4D31M 52/68 76.5% 72/94230402 0.0% 8/68 11.8% 93779006 NA +3229 chr4 + 190214555 169819448 169819447 169819530 83 CGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCAAAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:....:.--...x......:.........::..........x.xx.x...xx:.x.......:.:..x:xx:.x...:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 93786251 NA +3089 chr4 + 190214555 169843292 169843291 169843347 56 CCTCCCTCTCTCCCTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 + 94230402 44980311 44980310 44980366 44980311 44980310 44980366 56 CCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTTAATAGGATGAAG ...:...:.:..:::...:x...:..........:.........xx.::....:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 124862981 65351574 +3468 chr4 + 190214555 169843293 169843292 169843342 50 CTCCCTCTCTCCCTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 87791847 87791846 87791896 87791847 87791846 87791896 50 CTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGA ....x....:.:.:...:...............::.....:.....:... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 82051446 NA +3212 chr4 + 190214555 169844991 169844990 169845059 69 ACGGTGGCAGGTGCCTGTCGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTAAGCCCAGGAG chr4 + 94230402 76033198 76033197 76033264 76033198 76033197 76033264 67 ACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:....:--.::.x...x..............::........x.xx.x...x.:...:.:.....:.. 8M2D59M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% 93811793 NA +3759 chr4 + 190214555 169860827 169860826 169860899 73 GTGCACCTGTACTCCCAGCTATTCAAGAGGCTGAGGTGAGAGAATTACTTGAGCCCAGAAGATTGAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x....x.:.......:.::.:........x:xx.x...x:......:........x..x:.....:. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 93827623 NA +3297 chr4 + 190214555 169876163 169876162 169876232 70 TTCCTTCCTCCTGGAAGCC-TCAGTTCTGCTTTTCTTTTTTTGTTTTTTCTTTTTTCTTTTTTGAGACAGA chr4 + 94230402 69492444 69492443 69492514 69492444 69492443 69492514 71 TCCATGCCTCCAGGAAGTGGTTAATTCTCCTTTTCATTTCCTGTTTTTCCTTTTTTTTTTTTTTAACCAGA .:.x.x.....x.....:x-.:.:....x......x...::.......:.......:......x.:x.... 19M1I51M 53/70 75.7% 71/94230402 0.0% 1/70 1.4% 100383719 89830836 +3111 chr4 + 190214555 169882788 169882787 169882832 45 TTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 22617883 22617882 22617927 22617883 22617882 22617927 45 TCTGTTTTTTGTTGCTATTGTTGATTTTTTTCCTTTTTTTTTTTT .:.x..........:.:......x.......::............ 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 147264905 42949650 +3153 chr4 + 190214555 169882790 169882789 169882829 40 TTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTT chr4 + 94230402 90203142 90203141 90203181 90203142 90203141 90203181 40 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTT .....................:..xx.............. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 79679648 NA +3541 chr4 + 190214555 169882791 169882790 169882831 41 TTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 42595725 42595724 42595765 42595725 42595724 42595765 41 TTTTTTTGTTGTTGTTGCTGCCTTTTTTTTTTTTTTTTTTT .................:...:................... 41M 39/41 95.1% 41/94230402 0.0% 0/41 0.0% 127287066 62927489 +3076 chr4 + 190214555 169882793 169882792 169882837 45 TTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTTGCATT chr4 + 94230402 90203142 90203141 90203186 90203142 90203141 90203186 45 TTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATT .....x............:.x...xx...............:... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 79679651 NA +3182 chr4 + 190214555 169882794 169882793 169882872 79 TTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTTGCATTTTTAGTAGAAATGGGGTTTCACCATGTGAGCCATG chr4 + 94230402 6181192 6181191 6181267 6181192 6181191 6181267 76 TTTTGTTGTTGTTGTTGTCTATATTTTCTTGCTTTTTTTTTTTTTCTTTTATAACTGGGGTT---CAATATCAGACATG .................::.x.x....:..x:.......x:x...:.xx..x..x.......---.x..:.x..x.... 62M3D14M 57/76 75.0% 76/94230402 0.0% 3/76 3.9% 163701602 26512953 +3737 chr4 + 190214555 169896148 169896147 169896226 79 GTGGTGCATACCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGCTGCGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--.x.:..:.:...........::........x.xx.x...x.............:..x:xx:.....::. 8M2D69M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 93862947 NA +3317 chr4 + 190214555 169896586 169896585 169896646 61 GAAAGAAAGAAACGAAAAAGAAGGAAAGGAAAGGGGAAAGGGGAAAGGAAAGGCAGTCTGG chr4 + 94230402 54711716 54711715 54711776 54711716 54711715 54711776 61 GAGAGAACAAAATGGGAAAGAGGGAAAGGAAAGGAGAATGGGGATAACAAAAGTAAACTGG ..:....x:...:.::.....:............:...x.....x.:x...:.:.:x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 115184870 75029685 +3118 chr4 + 190214555 169917720 169917719 169917784 65 AATTTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGAGACGGAGTCTTGCT chr4 + 94230402 9700354 9700353 9700418 9700354 9700353 9700418 65 AAATTTATTACTTGTCTATTCAAATATTTATTTATTTCTTTACATATCTCAAATGGTACTTTGCT ..x.......:..:.:....:.xx.............x....:x...:.x.:.:..x:::..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 160217366 29997189 +3178 chr4 + 190214555 169920265 169920264 169920308 44 TTTGGTTTTTTTGTTTGTTTGTTTTGGTCTGTTTATTTTTTATT chr4 + 94230402 24169123 24169122 24169166 24169123 24169122 24169166 44 TTTGGTTTTTTTGTTTGCTTGTTTTGTTCTGTTTCTTCTCTACT .................:........x.......x..:.:..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 145751142 44463413 +3202 chr4 + 190214555 169925113 169925112 169925182 70 CGTGGTGGTGGGCATCTTTAATCCCAGCTACTTGCGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--..:x.x..:.:...........x:........x.xx.x...x........:....:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 93891916 NA +3113 chr4 + 190214555 169929423 169929422 169929484 62 TTGGGCAAGTTACTTAGCCTCTTTTAAATATCATTTTCCTTGTTGGTAAAATGAGGATAATA chr4 + 94230402 13242480 13242479 13242541 13242480 13242479 13242541 62 TTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTA ..........:..x........:.x.x::x...x.....:::.:x.......::.....x.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 156686943 33527612 +3209 chr4 + 190214555 169935893 169935892 169935962 70 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......x:..--......:...........::........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 93902696 NA +3065 chr4 + 190214555 169938343 169938342 169938409 67 TGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGGATCGCTTGAACCTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:.:.........::........x.xx.x.:.x.:........::....x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 93905132 NA +3409 chr4 + 190214555 169942096 169942095 169942220 125 AACACTGCCTCAAAATATGGCACCTTGGAAATTGAAAAAGCAGAA---GCAGGAAGGCTATTTCACCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTTTTTTTCTTT chr4 + 94230402 58577584 58577583 58577711 58577584 58577583 58577711 128 AACACTGCACACCAACTCACCATTTTGAAAAGTCATAAAGCCAGGTGTGAAATAAGGGCACCTAATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTT ........x:xxx..:x::x..::...:...x.x.x.....x:::---.x.:x....x:.::.x.:......:...::.:x..x.x:....x..:x...:.x.x......:..:..........:x.. 45M3I80M 78/125 62.4% 128/94230402 0.0% 3/125 2.4% 111364512 78850043 +3365 chr4 + 190214555 169942157 169942156 169942227 71 ACCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTTTTTTTCTTTCAACAGG chr4 + 94230402 68448576 68448575 68448646 68448576 68448575 68448646 71 ACCATCTTCTATTAATTTAAATTTCTCCTCCCCTGTTTTTCTTTTTCTTTCTTTCTTTTTCTTTCCAGAAG ...x.:....x..xx...xxx.:.:..:.:.:..x.:.................:..........x.x.:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 101493581 88720974 +3247 chr4 + 190214555 169946455 169946454 169946537 83 CATGGTGGCATGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGGGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x......:.........:.::......:.x.xx.x...x::........::.:..x:xx:..:...:. 8M2D73M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 93913258 NA +3215 chr4 + 190214555 169955281 169955280 169955346 66 GTGGTGGGCACCTGTAGTCCCAGCTACTCGGCAAGATGAGACAGGAGAATCACTTGAACCTGGAAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x......:.........:.:x.:.x....x.xx.x...x..........::.... 6M2D58M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 93922080 NA +3087 chr4 + 190214555 169965997 169965996 169966055 59 TGTTCTTGAAGCAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAAAAACCT chr4 + 94230402 37548373 37548372 37548431 37548373 37548372 37548431 59 TGTCCTCTCAGCAGTCTACAGCAGACCAAAAAAAAACAAAACAAACAAACAAAAAAACT ...:..:xx....:xx:.x.:..:.x.....x........................x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 132417624 57796931 +3117 chr4 + 190214555 169982790 169982789 169982872 83 CGTAGTGGCGGGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCTGCAAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.x::.--....:.............::........x.xx.x...x::......:.::x...x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 93949593 NA +3465 chr4 + 190214555 170009252 170009251 170009312 61 GTGCTCCTGTAGTCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x.x......:.........::::......:.x.xx.x...x.............:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 93976048 NA +3556 chr4 + 190214555 170019404 170019403 170019486 83 CATGGTGGCATGCACCTGTAATCCCAGCTACTCCAGAGGTTGAGGTAGGAGGATCACCTGAGCCCAGGAGTTTGAGGCTACAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x....:.:.........:x.:...:....x:xx.x.:.x...:...:.....:..:..x:....::.. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 93986207 NA +3676 chr4 + 190214555 170028831 170028830 170028900 70 CATAGTGGTGTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAAGCGCTTGAATCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.......:::.--......:...........::........x.xx.x.....:......:.::.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 93995634 NA +3623 chr4 + 190214555 170056280 170056279 170056362 83 CATGGTGGTGGGCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTCAACCTGAGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x....:.............::........x.xx.x...x.....x....::::..x.xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 94023083 NA +3376 chr4 + 190214555 170056401 170056400 170056472 72 CAGAGTGAGTCTGTCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACA chr4 + 94230402 74671039 74671038 74671107 74671039 74671038 74671107 69 cagtgtgaacccaccacaAGAATATACAAAAAT---TAGCTGTATATATATATATATACACACACACACACA ...x....::.:::.x...:..x.x.x.....x---..xx.:.............................. 33M3D36M 54/69 78.3% 69/94230402 0.0% 3/69 4.3% 95385362 NA +3009 chr4 + 190214555 170056407 170056406 170056479 73 GAGTCTGTCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACAC chr4 + 94230402 49483556 49483555 49483628 49483556 49483555 49483628 73 GAGTGTGTGCTGAAAGATGATAAACAGTAAAGTGTGTATGTGTTTATAAATACATGCACACACACACGCACGC ....x...x:::...:.x:.x...x.:x..x:.:.:...:.:.x....x.....::...........:...:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 120572851 69641704 +3057 chr4 + 190214555 170056416 170056415 170056478 63 TCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409059 4409058 4409121 4409059 4409058 4409121 63 TCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA ..x...:xx...:.:.xx:.:xx.:..:.......................x.x......... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 165647357 24567198 +3278 chr4 + 190214555 170056417 170056416 170056474 58 CAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACA chr4 + 94230402 78347573 78347572 78347630 78347573 78347572 78347630 58 CAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA .....x...x..:.......:xx.:.:.xx..:......................x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 91708844 NA +3031 chr4 + 190214555 170056419 170056418 170056468 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACA chr4 + 94230402 1495006 1495005 1495055 1495006 1495005 1495055 50 AAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .........x.:...............:.:..:...:...:.x.:.::.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 168561413 21653142 +3589 chr4 + 190214555 170072183 170072182 170072275 93 CCTGGAAAGTACAAACATAAGAACATGACTGTGTGTGTGTATGTGTGTGTGTGTATACGTGTGTTTATATAGATACATGTATATATATGTGTG chr4 + 94230402 86633906 86633905 86633991 86633906 86633905 86633991 86 CCAGGAAAAGACAAAGA-------ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.....:x.....x.-------....x:...:...:...x..:.:...x.......:..:..x.:....x.:.:x.....::..x...:.. 17M7D69M 62/86 72.1% 86/94230402 0.0% 7/86 8.1% 83438277 NA +3174 chr4 + 190214555 170072255 170072254 170072306 52 ATACATGTATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTATATAT chr4 + 94230402 55694457 55694456 55694508 55694457 55694456 55694508 52 ATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ..:...::...:.:........:.......x:x:....::............ 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 114377798 75836757 +3018 chr4 + 190214555 170072272 170072271 170072312 41 TGTGTGTGTGTATATATATGTGTGTGTGTATATATATATAT chr4 + 94230402 48958675 48958674 48958715 48958675 48958674 48958715 41 TGTGTGTTTGTATACATATATATGTGTGTATATATAGATAT .......x......:....:.:..............x.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 121113597 69100958 +6265 chr4 + 190214555 170128239 170128238 170128502 264 TTTTAAGGTTTAGTTAGCCCATTCAACAATGGCTTGGCCTTGAGAATCATAGGGTATTCCAGTACTGTGCTCAGTGTGCCATTGTTGGAGGAACACTTGTAAAGATTTACTACAGTAGCCTGGGCCATTGTCTATTTTAATCTTTTGTGGGATGCCTATGGCAGCGAAACAGGAAAGTAAATGTTTCTTAATATGAGCTGCTGCCTCACCTGTTTGGCAAGTTGTCCATACAACACGAGAAAAGGTATCTATAGTAACATGGAC chr4 + 94230402 19065337 19065336 19065600 19065337 19065336 19065600 264 TTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ......x...:x:..x...::...x..x..x.::......xx:.:xxx:.xx:.x..x..x........:.:x::x:x....xx...x..:...x.::xx.:xxxx:x....xx....x..............:....x..:.x.x....x..:..:..::.x..:..:..:x..xxx.:...::.:.:x.:...x::x..:x::..x..x.x...:xx:..x.:...:.:..x.:..xx.x.x..........xx..:..x.. 264M 157/264 59.5% 264/94230402 0.0% 0/264 0.0% 151062902 39151653 +12287 chr4 + 190214555 170146269 170146268 170146526 258 ATCTTTCAAATCAAATTTTTGTCTGTGTTGTGAAAGCCACAATTAGATGGAGCAAGGATCAATAAAGTATCCAGTTAATACACCAGAATATAAATGAAATGAATCATAGGAAATGAAATGACTT---TTGACAAATGCTGAGACAAATGCTGTGGCACAAAACCACAGG-TTGTCATTTGAAATTGATATTGTAGGGAAACTGTAGTTGCAGCATGAACTCTAATATATAAATCTTCCATGGCACAGGTGTTCACTA--ATTTG chr4 + 94230402 43730092 43730091 43730351 43730092 43730091 43730351 260 ATTTCTCAAATTA---CTTTGCCCATGCTGTAGGAACTGAAATTGGATGGAACAAAGATCAATAATGTATCCAGTTAATACACTAACATATAAATGAAATGAATCATAAGAAATGAAATGGCTTCTCCTGACAAAC-TTGAGATAAATGCTGTTCCATAAAACCTCAGTCTTGTCAATTTGAATTTATGTTATGGGGAAACAGTTGCTGACGTGTGAACTCTATTGTGTAAATTTCCTAGGAAGTGGGTACTCGCTATTATTTG ..:.:......:.---:....:.::..:...:::.:.::x....:......:...:.........x.................:.:x.....................:...........:...---:.......:-:.....:.........xx..:......x...x-......x..x:....x..:..:.:.......x..x.:..xx.::.........x.:.:.....:.:.:.x.:x:::...::..:...--..... 13M3D108M3I9M1D32M1I87M2I5M 192/254 75.6% 260/94230402 0.0% 10/254 3.9% 126416177 63798378 +3592 chr4 + 190214555 170171923 170171922 170172007 85 TGCATGTTGGCGCACACCTGCAGTTCCAGCTACTAGGGAGGCTGAAGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033195 76033194 76033277 76033195 76033194 76033277 83 TACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..::x...:....:--..:.............x.::.......:x.xx.x...x.............:..x:xx:..:..:.. 16M2D67M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 94138728 NA +3199 chr4 + 190214555 170184688 170184687 170184791 104 TTCCTCCACATCCTTGCTAATGCTTATTTTTTGTCTTTTTGGTAATAGCCACATTAAGAGGCATGTGATAATATCTCATTGTTTTAATTTGCATTTTCCTGCTG chr4 + 94230402 49285567 49285566 49285669 49285567 49285566 49285669 103 TTTCTCAATGCATTTTCCAATGCAAATTTTTTCTCTTTCTGATAGCAGCTTTCCAGAGAGGTTTGTTTTTATGTTTGATTATTTTTTTTTTC-TTTTTCTGCTG ..:...x.:::x:..x.:.....xx.......x.....:..:..::...:x:x:x:.....:x...xx.x..:.:.x...:....xx...x.-....:...... 92M1D11M 67/103 65.0% 103/94230402 0.0% 1/103 1.0% 120899121 69315434 +3452 chr4 + 190214555 170205414 170205413 170205504 91 CATAGTGGCAGATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGGACACAGGAGGCGGAGGTTGCAGGA------GCCAAG chr4 + 94230402 76033197 76033196 76033291 76033197 76033196 76033291 95 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG ..:.....::x.:.--....:.:...........::........x.xx.x...x......:..x...:..x:xx:..:..:..:.------...... 14M2D69M6I6M 64/89 71.9% 95/94230402 0.0% 8/89 9.0% 94172217 NA +3233 chr4 + 190214555 170219782 170219781 170219829 48 AAAAACAAACAAACAAACAAACAAAAAAAACCCACAAAAAACTGTAAG chr4 + 94230402 52473838 52473837 52473885 52473838 52473837 52473885 48 AAACAAAAACAAACAAACAAACAAAAAAAGCCCACCAAAAGCCATGAG ...x.x.......................:.....x....:.::.:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 117745944 72468611 +6701 chr4 + 190214555 170229061 170229060 170229227 167 TGCTTTGCATCCTGCTCACATGCCTTGTAATGTAATCTCAAGACACAGCTGTTGTTTCAGAGAGTTCATTCATGTCAGCAGCAA-TTAAAAAGTCCTTTGTTTTCCAAACATGCTTCCCAGCTTGTCTTGAGGAGCTTTGCAAACAATGACTCCT--ACAGCTTGAGGAA chr4 + 94230402 43736011 43736010 43736177 43736011 43736010 43736177 167 TGCTTTACATCCAGATCACA---CTTCTCATGTCATCTGAAGATGCAGCTGTTCTTTCAGATAGTTGATTCATGTCACCCACAATTTAAAATGTCCTTGCTTTTTAAAAAAGGCTTCTCAGCATGTCTAAAAAGTTTGTCTAAACAATGGTTTGTTCACAGTGTGAGCAA ......:.....x.x.....---...x.x....x....x....::........x.......x....x..........x.x:...-......x......xx....:x...x.x.....:....x.....x:.:::x:.x.x:........::.:x.--....:x....x.. 20M3D61M1I70M2I13M 123/164 75.0% 167/94230402 0.0% 6/164 3.7% 126493050 63721505 +9387 chr4 + 190214555 170272367 170272366 170272567 201 AGGAAGTGTTCAATACTTTATAGTCAGGAAAAATAGATTTTGTATCTTGACCTTTACATTAAGCTTTTCTTTTCAGAACTATATTACCTTGCAAAGTACACAGGGAACTGGAGCCAGCTTGTGACCTTTTGTTAACATGTAGTTTTGAGAAATGGGAAAAAGGCATTTTTATTATCAGGAATTTTATTACCTAAAAGAGTT chr4 + 94230402 43749028 43749027 43749221 43749028 43749027 43749221 194 AGGAAATATTCTGTATAATACAGT-GGAGAAAATAGATTTT-TGTTATGACCTTTAAGTTGAGCTTTTCTGTTCTGAGCCACATTATTTTGTTAAATACA-AGGGAACTGGAGCCAGCCTGTGACCTTTCGTTATCATGCAGCTTTGAGAAAT-GGCAAAAGTCATTCTGATGTTCAGAAGTTCCATTAC---AGAGAGTT .....:.:...x:..:xx..:...-:.::............-.:.:x.........x:..:.........x...x..:.:.:....::...:x..:....-.................:..........:....x....:..:..........-..x.....x....:.x..xx....:.:..::.....---.:...... 24M1D16M1D58M1D52M1D36M3D8M 151/194 77.8% 194/94230402 0.0% 7/194 3.6% 126523339 63691216 +3192 chr4 + 190214555 170277839 170277838 170278021 183 AAAAAGAAAAAGGAAAAATAAATAAAGTCATGATCACTAATCTCAAGTGGGCCCTTAGTGCTGTTGGCAATTATACTATTTTTCCCTAGTACTTTAATTCTTCTGCTCTGTCCTAGATAACTGTTTCATTCCTTTTCTTTTCTTTTTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTGTTTTGT chr4 + 94230402 72001320 72001319 72001483 72001320 72001319 72001483 164 AAAAGCTAAAAAAAAAAATGAACTGCAATATTGCCAGCAATTGTCAGTGAAACTTTATCACT--TAATGGATATGCT-----TTCATACAATTTAAATTCTC------------AATTAACTGACTGCCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTAT ....:xx....::......:..:x:x:x:..x::..x:...:x:x....::x.:...x::..--.:::::x...:..-----.:.x..xx.:..x......:------------.:x......x:.xx:.:.::....x:..::.x....:......:...:...........:.:x..:.:. 62M2D13M5D20M12D69M 98/164 59.8% 164/94230402 0.0% 19/164 11.6% 98276519 91938036 +3260 chr4 + 190214555 170277935 170277934 170278022 88 ATTCTTCTGCTCTGTCCTAGATAACTGTTTCATTCCTTTTCTTTTCTTTTTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTGTTTTGTT chr4 + 94230402 45354048 45354047 45354135 45354048 45354047 45354135 88 ATTCCACTGCACACTGACAAACTTCTGTTTCTTTCCTTTTTCTTTCTTTTTTTTTAACCCATTCTCTTTCTATAATTTTTATTGTGTT ....:x....x.xx.xx:.:.:xx.......x........::............:xx::.x....:...:.x.xx.....:..x.... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% 124923887 65290668 +3235 chr4 + 190214555 170280273 170280272 170280363 91 ATCTATCCATCTTTCTATCATCTCTATATGTGGATAGGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAAACACTAGTTTTCAAA chr4 + 94230402 58577648 58577647 58577738 58577648 58577647 58577738 91 ATCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTTTTACAAAAGATCACCTGTCAGA ....x.::x.:.::.:.....x.:.x:..x..xx.xx:...........::..........x...x.....:.x...x.::.x:.x...:. 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 111702625 78511930 +26478 chr4 + 190214555 170284110 170284109 170284645 536 TTTGTTATCTCTTCAAGTTCATACAATTAAAGTGGAACTCG--ACTTCTTTTGCTTGGAGATACTAAAAATTCTGTGCAGTGGAAGGAACTGTGACCTTTCTTAAATGGGTCCATCTTCTA---GCTCAAAAAAATAATTCTTAGATGGTGCTTTAACGCCTAGTTTTAGTGCAA-GACAGATTGTCAGGGTAATAAATTAAAGGCACCTCACTGCAGCGCTGTTGGCCAATGTTCTACCACAGGCCCATATTAATATTTTATTCCCTTTAATATTATTACATGATGCAGGCTTTATTTAAATGGATTTGATGGGTCTCTTGGTTGGCTTGACAACCAGAGGGAAAAATTAATGTTCTGCATTTAATCTCAGCTCAAGGCACTAAATTATTTTGGAGGTCAAAATCGTCATGCATATCATGCTAAATTATTGAATGTAATAACTATTAGCTAGCTGTCTACTTATGGGTT--TTAAAAATTGTTTACTTCATGCATCTTGAGCTAATTTTAAAGTAAATCCCTCTTTTAGTTTTTTCCCTCCTA chr4 + 94230402 43757914 43757913 43758447 43757914 43757913 43758447 534 TTTTTTTTTTTTTTACATCATTTCTATGAAATTAGGAACCATCATTTCTTCCGTATGATAATGATAAATATTCTCAGCTATTGAAA-ATCGGTAACATTTTATAAATG----CATGTCATATAAACTCAAATATGATTTCCTT---TGGACTTTTAAATCCTGCTTTCAGTACAAAGACATATCATTGATATAGTAAATTAAAGCTTCCTTACTGAAGCTATTTTGTCTACTGTTCTATCACAGTCCCATATTAATACTTTATCCTCTTTAATATTATTACATGATGCAGACTTTATTTAAATGGATTTGACGGGCCTCTTGGTTGGCCTGACAACCAGAGGGAAAAATTAATGTTCTGCATTTAATCTCAGCTCAAGGCGCTAAATTATTTTGGAGGTCGAAGCTGTCATGCATATCATGCTAAATTATTGAATGTAATAACTATTAGCTTGATGTCTATTTATAGATTAAGAAAAAAATGTTTACTTCATGCATCTTCAGCTAATTTTGAAGGGAA--CATCTCTTAAGTTTTTCTCACCTA ...x..x.:.:..:.x:.:xx.x.x..x...x.:.:.x:.:--.:.....::.:x..:x:..:x....x.....xx..x:.x...:-.x.x..:..x...:x......----...x.:x..---:......x.x:xxx.:...---...xx:.....xx...:x...:...:...-....x..::.:::x:..:..........x:x...:....x...xx.x...x.:.x.......:.....x............:.....:.:........................:....................:...:............:...................................................:...................:..:::.............................................x.x......:....:.:..--xx.....x...................x..........:...x:..--.x...:...:x......:.x.... 41M2I43M1D21M4D9M3I19M3D29M1I294M2I46M2D24M 412/526 78.3% 534/94230402 0.0% 18/526 3.4% 126526196 63688359 +13052 chr4 + 190214555 170307365 170307364 170308082 718 TTCCATAGGAGGGCAGTATAATATTGGAAAGAAACA-TAAGAACTTGGAGGTAGTTTTTTGTGCCTTATAATTAAACCATTTCCTGCAAGGGGAGTGGATGGTATTTCAAATCACACTAATAAATCTATGGGTTAATAACATGTGAGTTAGAATAGCCATGCACCATAATCACTGCTGTGGATTCATTTGTCTCTTTTTACACAGTATATTGATTTTTCCCCTTAAGAATGTAACAAAGAAAGAACTTT------------------------------------------ATAAAATTCTTTTGTCTTTAAACTCTGCTTGTTAATATATTCCTGTTGCCACTCATCTACTAGTAATTTCCTGACAGG--TAACTATTGCTGTTATAATTGGAAATAGTCTTGAAAAAGTAGTTGC-TGTGTTTCTGGAGAAACTTCTTATTACTGGTAATTGCCTGCATAATGAATTGCAAGAACTAGATGACTTCAGCCGAGATCAAAAGTGACCATTAACTCACCTATCTGCAAACTG--------AAGATTTCTGGGACTTGTATCTTATGGCAATTTCATTTCTTTTTCACTTTTTAAAAGACTCAGCTTTCTTCTGTCAAGTTCATAAGTATCAGCTCACACACATTTAATACTTACCTTGTCTTGTGAAACCTTTCCAGCAGATGAAAAACCATCTTTATTAATTCAGAAATATGGGAGTAGAGGGAATTGTTTGTGCATCTTGATTAAAAAATAAACAAGCAGGCAATTAAAT chr4 + 94230402 43770842 43770841 43771578 43770842 43770841 43771578 737 TCCCAGATGGGGGCAGCATTGCTTTAAAATGAAAAAACAAGACCCAGGAAGTCCTG------AACTGGTAATTAAACTGCTCACTCTGAGGGAAGTAGATAGACTCCCAAATCAGACTAATAAATCTGTGGGTTAATAACACGTTAGTCAGATCAG-CATGCCCCGCAATCACTGCTGTTGATCCATTTGTCTGTTTATACAAAGTGAATTGATTTTAACC---AAGGAATCATCAAAGAGAAAACTTGTAAGGAGaaaaaaaaaaaaaaaaaagaaaaaaTAAGCAACCAACAATGTTTACTTCTTCTTTAGTTCTAATGGATAATTTGTCCTTAAAATTACACTTTTAT---TAATTTTTTGTCAGATTTAACTCTTTGAATTGTGATTTAAAATACTCTTGAAATGTCAGCCTCGTGTTTTCCC---CATATTTCTTATTACCACTAATTCGTTATGTAATTAATTTTAAGAACAAGACTGGTGCTGTAGAGAATGGAGGTGAC---TGAGTTTACTGCCGAGAGCTTGTTAATGCATAGGCTTCTGGGCTTT---TGGTATGGCTG-TACATTTTTGTTTTCCATAGCAAGAGAGGAATTCCTACTCCATCA--TTCAGGTGT------TTATACATACT---CACCTCCTGTGTCTCAGAGGGTCACTGTAGCAGATAGAAAGTCATCTTTATTAAGTCTGGAAAACACAGGAAACAGAAAATGGTAGT-TGGCTCAAGAAAGGAAAAATTAAATGGGCAATTAAAT .:...x.x.:......:..x::x..::..x....x.-:....x.:x...:..xx.x------:x..x:.........:::.:x..x::....:...:...:.xx.::.......x............:.............:..x...:...x:..-.....x..::............x...:.........x...x....x...:x.........xx..---...:.xx:.x......:.:.....x------------------------------------------.:..x:..:x:..x.::..x.::...:x.x.x....x.:.:.:.:xx:::..x.x.:..:---......::..x...:--.....x..xxx:..:.:...x:.....x........x:x:..::x.-...x..:.:---x.x.:..........::x.....xx:.:::....x....x:......x...:x:x.x.x.:x....x:::.:.....---.:.x.:xx..::.x:x.:x:..--------x..::.......x:..---.xx......x:-.x.....:.x...:x.x.xx:..:...xxx.x:::.x:..::...--....x:x..------.:.:...:.:.---:..:.x.:x.....::x:::::.x:.x:.......::...::............x..x.:..x.::x::.x.:x:.:..x..x.x..-::x..::.xx..::..x..x:..:::........... 36M1I19M6D94M1D64M3D25M42I60M3D15M2I46M1I9M3D77M3D22M8I16M3D11M1D45M2D9M6D11M3D87M1D37M 430/683 63.0% 737/94230402 0.0% 89/683 13.0% 126536523 63678032 +3180 chr4 + 190214555 170327506 170327505 170327566 61 AGAAAGAAGAGAAAAAAGAAATAAAAAAGAAAGGGAAAGGGAAAGGAAAGGAAAAAGGAAA chr4 + 94230402 22109750 22109749 22109810 22109750 22109749 22109810 61 AGAAAGAAGACCAAAAAGAAATAAAGAGGGAAGAGACATGAATGAGAGAAGAATGAGGAAA ..........xx.............:.:.:...:..x.x.:.x::..:.:...x:...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 148217756 41996799 +3486 chr4 + 190214555 170334091 170334090 170334182 92 TAAAAATATGACAATTAGT--TGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATTGCCTGAACCTGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033184 76033183 76033277 76033184 76033183 76033277 94 TGAAAGGATGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...:x....:.xx:...--.....x......:.........:.::........x.xx.x...x::.:......::.:.:x.xx:..:..:.. 19M2I73M 62/92 67.4% 94/94230402 0.0% 2/92 2.2% 94300907 NA +3223 chr4 + 190214555 170346418 170346417 170346490 73 GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAACATGGGTAAGAACAGGTA---AGAACTGG chr4 + 94230402 42888295 42888294 42888370 42888295 42888294 42888370 76 GTGAGTTTGATTGTGTGTGTGAGAGAGAGAGAGAGACAGAGATTTAAAGTACATATGAAAAGATAAACAGAACTAG ...x..x..xx.........................x.....xxx..x:.:x:..x...x..:..---......:. 65M3I8M 56/73 76.7% 76/94230402 0.0% 3/73 4.1% 127458123 62756432 +3076 chr4 + 190214555 170403902 170403901 170403992 91 AAATGCCCAATCAATGAGTGGATAAAGAAACTGTGATATATATATATATATATATATATATATATATATATATATATATACACACACACAC chr4 + 94230402 60163424 60163423 60163511 60163424 60163423 60163511 88 AAATGCATAACTGACAAAT---CACTGCAACGGTGCTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACAC ......x:..:::.::.:.---:.xx.x...x...x...x..x:x.x...x............:.:........x..:.:x.x........ 19M3D69M 61/88 69.3% 88/94230402 0.0% 3/88 3.4% 110240478 79974077 +3073 chr4 + 190214555 170403976 170403975 170404012 37 TATATACACACACACACACACATACATATATGATAGA chr4 + 94230402 67195546 67195545 67195582 67195546 67195545 67195582 37 TATATACACACACACACACACATATATATATAATAAA ........................:......:...:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 103208430 87006125 +3067 chr4 + 190214555 170406346 170406345 170406434 89 TATATATATATATATATACACATATATATATACACACATATATATATACACACACATATATATATACACATATATATATATACACATAT chr4 + 94230402 54963195 54963194 54963283 54963195 54963194 54963283 89 TATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .....x:...:.x..::....x......:.:.......xx:.::.:::.x..:...:.:..x.....:x.xx.x.x.x.x....:.:.. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 115443151 74771404 +3000 chr4 + 190214555 170406379 170406378 170406442 64 ACACATATATATATACACACACATATATATATACACATATATATATATACACATATATATATAT chr4 + 94230402 74526066 74526065 74526129 74526066 74526065 74526129 64 ACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGAT ....xx.x..x:.:.........:..:x.:.......x.......::..:.:..:...x..x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 95880313 NA +3096 chr4 + 190214555 170463973 170463972 170464042 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 94430776 NA +3461 chr4 + 190214555 170464110 170464109 170464184 75 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGAAGACTT chr4 + 94230402 49163128 49163127 49163202 49163128 49163127 49163202 75 CTCCAGAAAGAAAAAAAAAAAAAAAGAACAAACCAACAAACACACGTATATATCCAAATAAATTCAACAAGACTT ...x.:...:...............:..x...xx..x...:.:.::.......x:.x...x..x:.xx....... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 121300982 68913573 +3161 chr4 + 190214555 170464122 170464121 170464187 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGAAGACTTGCT chr4 + 94230402 1495000 1494999 1495065 1495000 1494999 1495065 66 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTTACT ...x.:.........x.:......x.x......:.:..:...:.....x....:::.:::x..:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 168969122 21245433 +3090 chr4 + 190214555 170464124 170464123 170464178 55 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGA chr4 + 94230402 90030076 90030075 90030130 90030076 90030075 90030130 55 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAA ...x.......xxx:...::..............:.:.:............x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 80434048 NA +3353 chr4 + 190214555 170464124 170464123 170464177 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATG chr4 + 94230402 1495000 1494999 1495053 1495000 1494999 1495053 54 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATG ...x.:.........x.:......x........:.:..:...:.....x..... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 168969124 21245431 +3003 chr4 + 190214555 170464128 170464127 170464175 48 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:....x..........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 168969128 21245427 +3193 chr4 + 190214555 170469590 170469589 170469687 98 CCTCTCTCCTTCCTCCCTCCCTCCCTCTTTCCTTCCTCCCTCCCTTCTGCCCTCCCTCTCCTTCCCTCCCTCTCTCTCCTTCCCTTCCTTCCTCCCTC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTC---CCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCT-TTTCTCATTCTTGTCATCCCTTCTCC .:.:x..::....:.:....:.:........---.........x:x.:xx::....::.x....:..x...-.:....x...::x..x.:...:.::. 31M3D37M1D26M 62/94 66.0% 94/94230402 0.0% 4/94 4.3% 116705055 73509500 +3671 chr4 + 190214555 170486424 170486423 170486498 75 TGGCTCTGTCTCTCTCTC--------TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATAT chr4 + 94230402 4618336 4618335 4618419 4618336 4618335 4618419 84 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT .....x.x.:...:...:--------.......::..............x:....::......x.x......-....x...... 18M8I46M1I11M 61/75 81.3% 84/94230402 0.0% 9/75 12.0% 165868088 24346467 +3292 chr4 + 190214555 170486429 170486428 170486498 70 CTGTCTCTCTCTCTC--------TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATAT chr4 + 94230402 4618339 4618338 4618417 4618339 4618338 4618417 79 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATAT ....:.:...:...:--------.......::..............x:x...::......x.x......-....x.... 15M8I46M1I9M 56/70 80.0% 79/94230402 0.0% 9/70 12.9% 165868090 24346465 +3018 chr4 + 190214555 170486442 170486441 170486502 61 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATGAAT chr4 + 94230402 60831530 60831529 60831590 60831530 60831529 60831590 61 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAAT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x.:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 109654912 80559643 +3296 chr4 + 190214555 170486444 170486443 170486521 78 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATGAATTTACAGTTATCAAGCCTGT chr4 + 94230402 60831530 60831529 60831607 60831530 60831529 60831607 78 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGT ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.xx.xx....x....xx:.:.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 109654914 80559641 +3019 chr4 + 190214555 170486446 170486445 170486502 57 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATGAAT chr4 + 94230402 31820587 31820586 31820643 31820587 31820586 31820643 57 TTTCTGTATCAATCTCTCTCTCTATATTGATATATATATATATCTCTCTGTATGGAT .:...x.x..xx...............xx..............x.x.x.:....:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 138665859 51548696 +3050 chr4 + 190214555 170486446 170486445 170486497 52 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATA chr4 + 94230402 60831530 60831529 60831581 60831530 60831529 60831581 52 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA ...x.....x.............:.:.......:.:....:.:.:.:::.:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 109654916 80559639 +3009 chr4 + 190214555 170516570 170516569 170516641 72 ACCAAATCTGCTTTTGTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATA chr4 + 94230402 33250961 33250960 33251032 33250961 33250960 33251032 72 ACCAAATGTTCTGTTATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATA .......x.x..x..:..xx.x..:.::xxx.x..x.x.x.x.............:.....:.......... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 137265609 52948946 +3684 chr4 + 190214555 170516574 170516573 170516658 85 AATCTGCTTTTGTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATAT chr4 + 94230402 85834515 85834514 85834599 85834515 85834514 85834599 85 AATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ...x.:x...x.x..x.x...x::.x.....x.................:.xx..:..x.:...:....:..x...:..:.x... 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% 84682059 NA +3628 chr4 + 190214555 170516583 170516582 170516659 77 TTGTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATATA chr4 + 94230402 85834528 85834527 85834604 85834528 85834527 85834604 77 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACA ..x...:.x:..x.....x.................:.xx:....x::..::....:..x......:.x...::.:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 84682055 NA +3211 chr4 + 190214555 170516585 170516584 170516655 71 GTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATA chr4 + 94230402 39131747 39131746 39131817 39131747 39131746 39131817 71 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACA .......:::.x......x...x.x.......:x.....::.:.:.x.:x..::..x...x........:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 131384838 58829717 +3224 chr4 + 190214555 170516586 170516585 170516659 74 TTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATATA chr4 + 94230402 85834529 85834528 85834602 85834529 85834528 85834602 74 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA ...x...x:..x.....x.................:.xx:.:..x:::..:....:..x.:.:..:.x...::. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 84682057 NA +3004 chr4 + 190214555 170516589 170516588 170516663 75 GTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATATAGTGC chr4 + 94230402 39131747 39131746 39131821 39131747 39131746 39131821 75 GTTTGTACGCAAGTGTGTCTGTTTCTGTGTGTAAGTGTGCATGTGTTTAGATGCATTTATCCATATATACAACGC ..x.:..:.::x......x...x.x.......:x....::..:...x..x..::..x:..x:.......:.::.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 131384842 58829713 +3112 chr4 + 190214555 170516597 170516596 170516656 60 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATAT chr4 + 94230402 79265519 79265518 79265578 79265519 79265518 79265578 60 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT .............::........xx...:....:..::.::.:.::.:..::.x.:.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 91251078 NA +3104 chr4 + 190214555 170516598 170516597 170516658 61 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATAT chr4 + 94230402 86633924 86633923 86633984 86633924 86633923 86633984 61 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCAT ..x.:...:...:..:x..:.:...x......:...::.:.:.........x.:...::.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 83882674 NA +3327 chr4 + 190214555 170516599 170516598 170516696 98 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATAT---AGTGCATGAGG--TTTATATAAAAGAGCTCTAATTATTTG chr4 + 94230402 79265519 79265518 79265621 79265519 79265518 79265621 103 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTG .............::........xx........::..:.::.:.::...:::.x.:....---x..x..::.x:--.:........x.x:..:.:x:.x.... 60M3I11M2I27M 66/98 67.3% 103/94230402 0.0% 5/98 5.1% 91251080 NA +3187 chr4 + 190214555 170516604 170516603 170516658 55 TGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATATATAT chr4 + 94230402 85834541 85834540 85834595 85834541 85834540 85834595 55 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT .....x...................xx.....x::...:...::..x...:..:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 84682063 NA +3707 chr4 + 190214555 170525151 170525150 170525233 83 CACAGTGGCACGTGCCTGCAGTCTCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTAAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........::.::.--..:...::..........::........x.xx.x...x.....:.......:..x:xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 94491954 NA +19798 chr4 + 190214555 170527516 170527515 170528090 575 TGTGTTTTCATTGA----CTGGCATTGAAACTCCTCCGTGTTTCATCCTTATAGCTACTCAAGTATCCATTGCTGGATGAATAATTCTACTCAGCCTTT-CATCCACCTGTAATTTTTCACTCGTGGTAATTGGATGCAAATTGGCTAGTGTTAATCATCAGATGTCTCTAATTAAAAACAGAAACTGGAAATGTTGTTATGAATATTGGAAGAAATGAATAAAGCAGATCAGGAAATACTTCTCTATAGGGCCTCATGACTTACTCCTGAGTGTCATTAAACTGTAGCAGGTGAAGGTGCCCTGCTTGTATTGATGGCAGAAAAGAGA----CAGAAATAACCTAGAAGTCACATATGAAGTCAGTGTTTTCTAAAAA------TTGGGAAAGTATTCCTATAACTCAAGCACTTTTTTAAATTGAATAAATTAAGAACTTTGAAAAAGAAATTTAATTAGTCAAAAATTGGATTGGTATAATGAAA-----------TGCAGGTCAAATGGACAGTTAAAGCCTTTTAAAAAACTTGATTTCTAAAATAAAATGAAAACATGATGGATTAAAAATTTAATGGATATTTTCTGGAACCAA chr4 + 94230402 43809566 43809565 43810155 43809566 43809565 43810155 590 TATGTTTTCAGTGAAATCTTATTTCAGAAAGTACAACATATTCATTCTTGATATTTAAGCAAATGCATATTGCTGAATGATTAATTGCATTCAGCCTTTTCATCTACTTTTAATTTTTCAGGAGACATAATTGGATGCAAATTGGCCAGTGTTAATCATTAGATACCATTAATTAAAAACAGAAGCTGTAGGTAATGGTATGATTATTGGTAGAAATG----AAGCAGATCAGGTAATACTTTTCTTCAGAGACTCATGACTTATACCTGAGTCTCATTAAATTCTAACATGTAAAAGTGCCCTGCTGGTAGAGACTGTAGGAGAGATGTATTTATAAATAACTTAAAAGTAACATATGAGGGCAGATTCTGAAAAAAAAAGGAGGTAGGGGAACATTCATATGGCTGAAGGAC--TCAGGAGTTTAATAAATTAGGAAGTTAAAAAGAACAATTTAATTAGGTGGAGTTTGGTTTTACATAATGAAAAAAAAAAGTGTTGAAAGAGAAATGAAGGATATAACTTTTCT----GATCCTGTTTCTGAAGCACACC-AAAATGTCATGTTCTGAAAACTCAGTGAGTATTTTTTGAACTCAA .:........x...----:.:x:x:x....x.x.xx.:.:..:xx..:.x...x:..xx...:.::x:.......:....x.....x:.:.........-....:..:.x..........xxx.xx:...................:............:....::.x:...............:...x.::.:x..x.....x......x.......----............x.......:...x:..:.x...........:x.......x........:.x..:..x..:..:..........x...xx..:x.:..:.:...x:----:.x.......:..:....x........:.x...xx.:.xxx.....------x.:..::.::....x...::..x...x..--.:xx:.:..x.........:...x..x:...:.:x...........x:::.:x....x..x::.........-----------..x.:.xx.....:.x::.xx..x::..:.----:.:::x:.....:..::.x.x:-....::.x...xx:.:....:.:.:..::......:..:.x:... 14M4I81M1I118M4D107M4I46M6I29M2D72M11I30M4D22M1D45M 392/564 69.5% 590/94230402 0.0% 37/564 6.6% 126717950 63496605 +3167 chr4 + 190214555 170572868 170572867 170572983 116 GTATATATACATGTGTGTATATG--------TACATATGCACACATATGTGTACATATGTATGTATACACATATATACATAGACATACATATATGTACATATATACACATACATAAGTATATAT chr4 + 94230402 91734574 91734573 91734697 91734574 91734573 91734697 124 GCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT .:.....x.:....x.x:x....--------..x.....:x:x.x....x:xx:....x....:...:::..xx...x.x.:::x....x.x..::.:.:.x.x...:......:......... 23M8I93M 75/116 64.7% 124/94230402 0.0% 8/116 6.9% 78838294 NA +5641 chr4 + 190214555 170572905 170572904 170573029 125 TATGTGTACATATGTATGTATACACATATATACATAGACATACATA---TATGTACATATATACACATACATAAGTATATATATATACATATATACGTACGTGTGTGTGTGTGTGTGTGTATATATAA chr4 + 94230402 44243186 44243185 44243310 44243186 44243185 44243310 125 tatatatata-atgtatatatatatata-atatata-atatatataatgtgtgtgtgtgtatatatatatatatatatataCACAGACACACACACACACGTGTGTGTGTGTGTCTGTGTATATATGA ...:.:..:.-......:....:.:...-...:...-.:...:...---.:...:::.:....:.:...:...x:......:.:.x...:.:.:..::................x...........:. 10M1D17M1D7M1D9M3I79M 93/122 76.2% 125/94230402 0.0% 6/122 4.9% 126329719 63884836 +3564 chr4 + 190214555 170572944 170572943 170573028 85 ATACATATATGTACATATATACACATACATAAGTATATATATATACATATATACGTACGTGTGTGTGTGTGTGTGTGTATATATA chr4 + 94230402 32744950 32744949 32745029 32744950 32744949 32745029 80 ATGTACACCTATCTATCTATACATCTACAGAA-----TATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATA ..::.:.:x.:.x:..x......:x....x..-----....x.......:....::..:x.....::.......:.....:.... 32M5D48M 58/80 72.5% 80/94230402 0.0% 5/80 6.2% 137827994 52386561 +13833 chr4 + 190214555 170584617 170584616 170585068 452 AGCATTTTATTAGTTTAAAGGCTCTGAAGGGGCATTGTGAATAACACTACT----TCCTCATTTAACTTACTCAATATATTTCGATGAAGTACACCAGTGGGACAAAATGTTGAAGAAAC----ACAAACTTTTAAAGTTGCCAGTGATTTAATTTAACACAAGTTTCTTTGGTATTTGCATACACAGATTGTATTATTTATAATTAACTTCCCTAGTCATGTATTTT-CAGCTTTCCAAATCCCTCAGTAAGTATCCTTCTGCCTTGTTGAAAAGTTCAGTTACATATGACAGCACCAATCTGGCATTTAAATGTGACACTCATTTTAATGT------GACACTCATTCTTCAAATAATACACACAAAGTGACATACAAGAAGACCATCTACTTTGTGTCCCCTGTCACCTCTGCCTGTGGCTCCCATAGATTA-GCGACTCGAGGGCTGAACTTGCCACTCTATCA chr4 + 94230402 43815471 43815470 43815924 43815471 43815470 43815924 454 AACATTTTCATATGCTTAAAGCATAGAACGGCTAATATGTATAACAGCATTCAGTTAATCATTTTGCTAAGTAATTATATCCCCAAGAAACAGCCTGATGGGATGACATGTCAAAGAAGCCAGAAAGAAATTTAAAATTCTGCAGTTATTTAATTGAATA--AATGCATTTATTATTTGCATATACAGCTTATATTATTTATAATTAACTTCCCAAATCATTTATTTTGTAGTCTTTTAATTTTCTCTGTA----TCCTTCTGAGTCATTGAAAAATCCAGTCACATCTGACAGCCCCAATCTGGCATTTAAATGCGA--------TCAAAGTAGGCAGAGCAATCATACTTTAAACAACTTATCCTGAGTGACATATTAAAAAATCTTAAAATCAGTGCCAACAGCCACTTTTGCCTGTGGCAGTCTTAGATCAGGCCACTTCAAGGCCAAACACACTATCTTATTA .:......xx..xx:.x..:..x:x...x..x:.x.:..x......x:.:.----.xx......x:..x.x.x.x.....::.x.x...::.xx.:::.....::.x....::.....:.----.x:..x...x...x.:xx....x........x..:.--.:.x:x...:x..........:....x..:......................x.:....x......-:..::..::..x.::...x...----........xx.::.......:.:....:....x.......x...................:..--------.:..x..------::..x....x...:...:..:x:.:x.x:.........:x.:..:.:.x.xx.x.:x...:.xx.x.:...:.:..........xx:.x.....:.-..x...:x.:...::...x::.:.:::...:. 51M4I65M4I36M2D66M1I22M4D63M8D7M6I96M1I32M 299/438 68.3% 454/94230402 0.0% 30/438 6.8% 126769146 63445409 +3026 chr4 + 190214555 170647139 170647138 170647191 53 CAAAGATCAGATATATATATATATATACACACAGACACACATACACACATATA chr4 + 94230402 74671065 74671064 74671117 74671065 74671064 74671117 53 CAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ....:..:..x.:..............:.....x.......:.x.x.x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 95976074 NA +3424 chr4 + 190214555 170683928 170683927 170683996 69 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATGTCTTGAGCCCAGGAGTTTGAGGC chr4 + 94230402 76033204 76033203 76033272 76033204 76033203 76033272 69 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ......x......:.........::::........x.xx.x.:.xxx.....:.....:..:..x:... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 94650724 NA +3023 chr4 + 190214555 170718879 170718878 170718921 43 CCAAAAAAAAAAAAACCTCAAAAAACAAAAACAAAACACACAC chr4 + 94230402 56761815 56761814 56761857 56761815 56761814 56761857 43 CCAAAAAAAAAAAACCCACAAAAAACAAAAAAAAAACATAGAC ..............x..x.............x......:.x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 113957064 76257491 +6375 chr4 + 190214555 170719136 170719135 170719391 256 TTTTAGTG------AACCTTTGCTGACAGGAGCTCTTAGTTGTTGTCATTCCCCGCCCCTCGTTCCCAAATATCTAGACTGTAAAATTTGATTCCAGCCTGTCAACCATTAAGCAGCAATAATTATTTCTGAAGTAGTGAAGGTGAAGTGTGACAGCCATTTCATATCGACGACCTTTTCCAAGCTTCATAAAACTTTCAGGTTTCTTTTTCTTTCTCTATCTCTTATGCAACAGCCAAAGAGAAAAGAAAGCTAAGGAAAA chr4 + 94230402 43837446 43837445 43837682 43837446 43837445 43837682 237 TTTTAGTATGTAAAAGCTGTTGCTGATGGG---TATTTATTGCTGCCACCATCCACTCTT--------AACATGTAGAATGTAAAAATTGCCTCCAGCCTATCAACTATTCATCAGCAATAATTATGCCTGTAGTAGTGA-----AAGTGTGATGGCCGTTCAATA-CATAGCACTTCAGCAGGTCTTAT--TGCCTCCTGGATTATTTTTATTCTGTTCTTTC-CATGCATCAGTCA-----AAAAGTATGCTTAGGAAGA .......:------.:.:x.......::..---.x..x:...:..:..::x:..:.:.:.--------..:..x....x.......x...x:........:.....:...x.x.............x:...x........-----........::...:..:x...-.:xx.xx...:xx..:.::.:..--x:.:.:.x..x..x.....x..::x:.x.:..-:.....x...:..-----.....x.x...x.....:. 8M6I16M3D27M8D72M5D21M1D23M2D32M1D13M5D19M 162/231 70.1% 237/94230402 0.0% 31/231 13.4% 126881690 63332865 +4067 chr4 + 190214555 170751919 170751918 170752229 311 TTCAAGATCAGGTCAAATATTGATAATATTACCATGGAAATATGGCCTAGGTGGTAAATTAAAGACTTATAAATCAATGGTTTAAACATATTTTATAGATTTTCTTGATCAATAAAAAATGATTTGTATAAATATTTAAATTTAATTTAGTGTTCTGCA----TTTGCACAAGCATGAAAAACATCACAATAAG-----CTTTAATTTCCTGTAAACAATTTTACCTTTATTTAACACATT-CTTACTGAAACAATAATTCTTGAACTCTTCTAAATAGTAGTTAATGTCTGATGCATTGTTAAAAATGTAATGGAATTTT chr4 + 94230402 43849713 43849712 43850002 43849713 43849712 43850002 290 TTCTAGTCCACAGCAGATATTTATGCTAT-------GAATGATGACTT-GGTGGTAAAT-----------AAAT------TTTGTGC---TTTCATAATCGTTATTGATCAATAGAAAATGATTTGTGTAAATGTATGAATCCATGTGAATTGCTTATGATATTTTCTACTAAT-TAAAAAAAATCCTAAGAAGGGGACAAGTAATTTCCTGTTAACAAGGAGATTTTTGTTTGCAACATGATTTACTGAAGCTGTAGGCTGTGAAAGA--CTAGGCAGTAACTAGTGCTGACTTCTTCTTTGCCACTGCAATGTCATTTT ...x..x:..x:x..:.....x..:x...-------...xx...:.:.-..........-----------....------...:x:.---...:...:x:x..x..........:............:.....:.x.:...::.xx.x.:.xx::.:::----...x:..x.::-.:.....x...x:..x...-----xxx...........x.....xxxx.::...:...:xx....x-:........:.x:..:x::x....xxx--...:::....::..:..::x:x.x.x.:x..:xx.x..:....xx..... 29M7D12M1D10M11D4M6D7M3D69M4I11M1D19M5I42M1I27M2D50M 180/280 64.3% 290/94230402 0.0% 41/280 14.6% 126902206 63312349 +3143 chr4 + 190214555 170798452 170798451 170798510 59 TGCGCCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGAAGAATCACCTGAACCCAGGA chr4 + 94230402 76033205 76033204 76033263 76033205 76033204 76033263 59 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ...:.x....:.:.........x.::........x.xx:x...x...:.........:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 94765247 NA +3378 chr4 + 190214555 170842991 170842990 170843054 64 TTCATCTCAAAAAAAAAAAAAAAAAAAAAACAAC---GAAAACAAACAAACAAACAAAAAACTGTGA chr4 + 94230402 73195746 73195745 73195812 73195746 73195745 73195812 67 TTTATTTAAAAAAAAGCAAAACACAAATGACAACTGCAAAAACAAACAAACAAACAAAAAATTATAA ..:..:.x.......:x....x.x...x:.....---:.......................:.:.:. 34M3I30M 51/64 79.7% 67/94230402 0.0% 3/64 4.7% 97647245 92567310 +3206 chr4 + 190214555 170856439 170856438 170856512 74 GTGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGTAGAATCGCTTAAACCCGGGAGACAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x...:..:.........:.::........x.xxxx...x.:...:.....:.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 94823235 NA +3033 chr4 + 190214555 170878386 170878385 170878423 38 ATATATATGTGTGTGTGTATAGATATATACATACACAC chr4 + 94230402 28919110 28919109 28919147 28919110 28919109 28919147 38 ATATATATGTGTGTATATATAAATATATGCATACACAC ..............:.:....:......:......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 141959276 48255279 +3276 chr4 + 190214555 170900373 170900372 170900472 100 TTCTCAGGTTTTCGGGGTTTTTTTCCTTTGTCTTCCTTTGTCTTCCTATTTGTTTTTTTGTTTTGTTTTGTTTTTTACCCTTCCTACACACTTTCTGAGA chr4 + 94230402 73873194 73873193 73873293 73873194 73873193 73873293 100 TTTTCAAATTTTAATTGCATTTTTCCCTTGTTTGTACCCCCCCTCCCCCTTTTTTTTTTGTCTTATTTTGTGATTTGTGCTACTTAAATAGTTTTTGAAA ..:...::....x:xx.:x.......:....:.x:x:::x:.:...:x:..x.........:..:......xx...::x..x.:..x.:.x...:...:. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 97027179 93187376 +3162 chr4 + 190214555 170903061 170903060 170903118 58 ACTCCAACTCAACAACAACAACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGC chr4 + 94230402 55413857 55413856 55413914 55413857 55413856 55413914 58 ACTTTAAAGAAACAACAACAACAAAAAAGGAAAAAAAAAGGAAAGATAAATATGGAGC ...::..xxx..................::.........:..:...x.:.x.x:.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 115489204 74725351 +3022 chr4 + 190214555 170903064 170903063 170903129 66 CCAACTCAACAACAACAACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAATGCAATAAA chr4 + 94230402 89572250 89572249 89572315 89572250 89572249 89572315 66 CCTACACCACATAATCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAA ..x..x.x...xx.x.....:..............:...........:x::x.:x::::....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 81330814 NA +3266 chr4 + 190214555 170903082 170903081 170903116 35 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 + 94230402 75300455 75300454 75300489 75300455 75300454 75300489 35 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 95602627 NA +3116 chr4 + 190214555 170903084 170903083 170903129 46 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAATGCAATAAA chr4 + 94230402 44890393 44890392 44890438 44890393 44890392 44890438 46 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAA ..::.........................::...x...:..x:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 126012691 64201864 +3091 chr4 + 190214555 170903085 170903084 170903121 37 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAAT chr4 + 94230402 30452108 30452107 30452144 30452108 30452107 30452144 37 AGGAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAGT .::................................:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 140450977 49763578 +3340 chr4 + 190214555 170903085 170903084 170903127 43 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAATGCAATA chr4 + 94230402 75300456 75300455 75300498 75300456 75300455 75300498 43 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTA ................:................x...x..:.. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 95602629 NA +3026 chr4 + 190214555 170913020 170913019 170913087 68 TACATATATACACATATATACATATATACATATATACATATACCTATATACGTATATACATATATACA chr4 + 94230402 87366139 87366138 87366206 87366139 87366138 87366206 68 TATACAAATAGATATAAATACATATATACTTAGAGAAAGAGACCTATACACGTGTACATGTGTGCACA ..:.:.x...x.:...x............x..x.x.x.x.x.......:....:..:.::.:.::... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 83546881 NA +3003 chr4 + 190214555 170922020 170922019 170922072 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 147674298 42540257 +3100 chr4 + 190214555 170922022 170922021 170922080 59 ATATATATATATATATATATATATATATATATACACACACACACACACACACAAAGTAA chr4 + 94230402 23247722 23247721 23247780 23247722 23247721 23247780 59 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAA ..:.:.:...::.:.:.:..x...:x.:....::.......:............:.x.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 147674300 42540255 +3048 chr4 + 190214555 170922035 170922034 170922132 98 TATATATATATATATATATACACACACACACACACACACA-------------AAGTAATATTCATCCACACAAAGAAAGTCTTGCCATTTGCA--ACAACAGGGATGATCCT chr4 + 94230402 4409082 4409081 4409185 4409082 4409081 4409185 104 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAAA--------CAAACAGAGAATTTTCTGCT-CTTGCAACACAGCAGATATAATGCT .:..:.......................x.x.........-------------...x..--------..x...:....xx.::...:-:.....--...:...:x..:..x.. 40M13I6M8D20M1D6M2I17M 71/89 79.8% 104/94230402 0.0% 24/89 27.0% 166512953 23701602 +7737 chr4 + 190214555 170923183 170923182 170923435 253 TACAGCAGACAGAAATGTTTAAATAACCTATGGCTTTCATTGCAAAGCAGATTTCTCATGTCTCCAAACAAATAATTTAGAAAGAATTTATTATGAATCAATAGAGCAACATTCCCTCTAGTTCATTGCACTTGTTATTACGCTTTCTTTAAAAGTGCCCAAGAAAGAATTTAAATTTATCACTCCTCTTTAAACTTGTAAAAGCCTGTGTTAATTGGATGTCAACCTCTT---TTTACTCACATGCTTGCTGACA chr4 + 94230402 44031791 44031790 44032035 44031791 44031790 44032035 245 TATGACAGATGCAATGCTTCAAATAACCTTTGTTTTTT---------CAATTCCATTCTGTTTTTACATATATAAATTATACA-AATTTCTGATGACTCCATGGGACAACAATCTTCTCAGGTCACTCCGCTTGTAATTACAACTAATTAAAACGTGCCAAAGAAAAGATAGAAATTTATCACTGCTCATTAAGCCTGT-AAAGACTGTGTTAATTAGATGTCAGACTCAGTAATTCACATAAATGTTTGCTGCCA ..:::....::x..xxx..:.........x..x:...:---------..:x.::x.:x...:.::.x.:.x....x...x.x.-.....x.x....x..x..:.::.....x..:::::..x...:.x.:.....x.....:x:.xx..x...x.....x......::..xx............x...x....:.:...-....x...........:.......:x...xx---..:..x:.x...:......x.. 38M9D36M1D115M1D31M3I22M 166/242 68.6% 245/94230402 0.0% 14/242 5.8% 126891392 63323163 +3239 chr4 + 190214555 170929644 170929643 170929714 71 GTGCACCTGTGGTTTCAGCTACTCCAGAGGCTGAGGTGGGAGGATCACCTGAACCTAAGAGGTTGAGGATG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x...:...:........:x.:........x:xx.x.:.x...:......:.::..x..x:..x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 94896440 NA +3452 chr4 + 190214555 170931176 170931175 170931254 79 CATTTGTGTATGTGTGTGTATGTGTGCGTACATGCATATGTATATAAAGAGAGATACATATATGTATATATATGCACAT chr4 + 94230402 85834537 85834536 85834615 85834537 85834536 85834615 79 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .........x.........:......::.xx...:.x:::..:...x:x.:.x.:.::.x....:.:.:...::..... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 85096639 NA +3010 chr4 + 190214555 170931920 170931919 170931973 54 CTTTTGTTTTTCTTTTTTTTTTTTGTCCTCCTGCTACTTGCCCACAAAAGAGGG chr4 + 94230402 62652691 62652690 62652744 62652691 62652690 62652744 54 CTCTTTTTTTTTTTTTTTTGTCACGTTCTTCTACTACTTGCACAGGAAAGAGGG ..:..x.....:.......x.:x:..:..:..:........x..x:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 108279229 81935326 +3059 chr4 + 190214555 170953598 170953597 170953662 65 TATTTTTTTCTCTCTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTTTCTTTTTCTTTCTCTCTCT chr4 + 94230402 71751218 71751217 71751282 71751218 71751217 71751282 65 TATTCTTTTCTTTCTGTTTTTTTTTTCCCCCTATTTGTTTGTTCTTTCTTTTAACTTCTCTGTCT ....:......:...x:...:......:::..x:..x:..x:.:........xx:......x... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 99202380 91012175 +3054 chr4 + 190214555 170957330 170957329 170957393 64 TTTCTTTTTATGTTCTTCTTTAGTGCGTTGTCAAAAGTTTTTCCATTTTGGGGGGATAGTGTAT chr4 + 94230402 6167335 6167334 6167398 6167335 6167334 6167398 64 TTTCCTACTATGTTTATTTCTAGTGCTTGGTCTAGTATTTTGTCATTCTGGGGAGAAAGTGTAT ....:.x:......:x.:.:......x.x...x.:x:....x:....:.....:..x....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 164789995 25424560 +3214 chr4 + 190214555 170962538 170962537 170962591 54 CATATATGTGTGTACACACAGACACGCACACATACACACACACACACACACACA chr4 + 94230402 23247721 23247720 23247774 23247721 23247720 23247774 54 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ...:.:...:..:.......xx:.:.x...:..::.......:........... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 147714817 42499738 +3027 chr4 + 190214555 170970720 170970719 170970801 82 CATGTGTGTATGTATATATGTATATGTACACCTATGTGTATATATAGGTATATATGTATAAATATATGCATATAAATATATA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ....::.::x.x.x..:..:.::.x:x.:..x.:.:..:...:.x..x..:x.:......x....:..........:.x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 94593863 NA +3052 chr4 + 190214555 170972360 170972359 170972472 113 TATTTAGTTATATGACTTTCATATAT-ATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCT chr4 + 94230402 7823238 7823237 7823351 7823238 7823237 7823351 114 TATATGGCAGTGTAGCTCACGTATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGCTTCTTATTCT ...x.:.:x:.:.::..:x.:...x.-.:...:.........:.:........x.xxxxx.:..xxxx..:...x..:..............x:..x::.xx.xx...::.... 26M1I87M 72/113 63.7% 114/94230402 0.0% 1/113 0.9% 163149122 27065433 +3093 chr4 + 190214555 170972376 170972375 170972457 82 TTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTT-----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 34623071 34623070 34623157 34623071 34623070 34623157 87 TTTTCTATATATATTGATATATGTATATACACATTTCTTTTTTTCTGTCAGGATTTTTCCTTTTAATATTAGGCATTGTTTTTTCAG ...:x.........xx......:......:.:....:.......:.x.-----.....::....xx.x..xxx:x..x......x.. 48M5I34M 60/82 73.2% 87/94230402 0.0% 5/82 6.1% 136349305 53865250 +3065 chr4 + 190214555 170972376 170972375 170972449 74 TTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823261 7823260 7823334 7823261 7823260 7823334 74 TTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ...:.:...:.........:.:......x.:.:xxxx.:..xxxx..:...x..:..............x:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 163149115 27065440 +3082 chr4 + 190214555 170972376 170972375 170972437 62 TTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251000 33250999 33251061 33251000 33250999 33251061 62 TTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ...::.:.:.:.:.:.......:.:........xxx.....x...x.....x..x....... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 137721376 52493179 +3136 chr4 + 190214555 170972376 170972375 170972447 72 TTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823263 7823262 7823334 7823263 7823262 7823334 72 TTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..x....:.........:.:......x.:.:x.xx.:..xxxx..:...x..:..............x:... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 163149113 27065442 +3009 chr4 + 190214555 170972380 170972379 170972445 66 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823269 7823268 7823334 7823269 7823268 7823334 66 ACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT .:.........:.:......x.:.:x.x..:..xxxx..:...x..:..............x:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 163149111 27065444 +3020 chr4 + 190214555 170972382 170972381 170972453 72 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 21549938 21549937 21550009 21549938 21549937 21550009 72 ATGTACACGTGTACACATGTACACATTCTTTCTTGTTATTGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTT ..:..:.::.:..:.:..:..:.:..x:...:..x..x..x......x..x..x..x...x...x....... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 149422444 40792111 +3143 chr4 + 190214555 170972384 170972383 170972454 71 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 21549938 21549937 21550008 21549938 21549937 21550008 71 ATGTACACGTGTACACATGTACACATTCTTTCTTGTTATTGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT ..:..:.::.:..:.:..:..:.:...:...:..x..x..x......x..x..x..x...x...x...... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 149422446 40792109 +3017 chr4 + 190214555 170972388 170972387 170972426 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 146179762 44034793 +3171 chr4 + 190214555 170972392 170972391 170972462 71 ATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 + 94230402 65932354 65932353 65932424 65932354 65932353 65932424 71 ATCCATATATTTCTGTAATTTTTTTCTGTTATCTCCTTGCTTTTTTTTTTTGTTTTTTTTCATGAAGGGGA ..x:......x.x.:..x.......:.x..x.:.::..x:...........x........:x...::x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 105040038 85174517 +3087 chr4 + 190214555 170972394 170972393 170972446 53 ATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077444 47077443 47077496 47077444 47077443 47077496 53 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT .......:......x.....x:...x:x...:.xx.................. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 123894950 66319605 +3301 chr4 + 190214555 170972396 170972395 170972448 53 ATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077444 47077443 47077496 47077444 47077443 47077496 53 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT .......:............x:...x:x...:.xx.................. 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 123894952 66319603 +3087 chr4 + 190214555 170972398 170972397 170972450 53 ATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 47077444 47077443 47077496 47077444 47077443 47077496 53 ATATATACATATATTTTTTTGCTTTGCATTTCTGGTTTTTTTTTTTTTTTTTT .......:....x.......x:...x:x...:.xx.................. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 123894954 66319601 +3227 chr4 + 190214555 170975949 170975948 170976020 72 GTGAGAGTGAGACTCCATGTGGGAAAAAAAAAAAAAAAAAAGTTAATAACAAAAAAAACCTCCAGGACCAAA chr4 + 94230402 47104124 47104123 47104190 47104124 47104123 47104190 67 GTGAACAGAAAGTTGCATGTGGAAAAAAAGAAAAAAAAAAAGCCAACAACAAAAA-----TCCAACACCAGA ....:x:x:.:::.x.......:......:............::..:........-----....:x....:. 55M5D12M 50/67 74.6% 67/94230402 0.0% 5/67 7.5% 123871825 66342730 +3240 chr4 + 190214555 171009193 171009192 171009333 141 AGTTCTTGAAACAAAATAGAAATTATTTAAAAAGAAA----CTCCGGAACATCAGGAAGTAAGCAAAAAAAAAAAAAAAAAAAAAAAATTGCAAACTTTAAAATATGGGTAAACAGAATAGACTTGACAGTTTCTTGAGTTTTAA chr4 + 94230402 49292001 49292000 49292141 49292001 49292000 49292141 141 AGTAACTGAAACAAAA-ACAAACCA---ACAAAGAAATCCCCTCGAAAACACTTAGAAAATGCCAAAAAAAAAAAAAAAAAAAGACATTTGCACACTGGAGAATTCAGAGAAGTGAATTGCTCCCTAGAATTCCTCTGGTTTTGA ...xx:..........-.x...::.---.x.......----...x::....::x:...:xx:x....................:.x.x.....x...xx.:...x::.:x..::::.x.:xx.::x.x.:..:..:x:.....:. 16M1D8M3D9M4I104M 88/137 64.2% 141/94230402 0.0% 8/137 5.8% 121717192 68497363 +10149 chr4 + 190214555 171013639 171013638 171014236 598 TAATGTTGATTTATTCCACTTCTCTAAAAGGAATAAATACGATTTTTTCCTCCATTATACACTTGATTTGGAACTGTTCTGATTTCAAATACATTACAAAAATGTTTCAAAATAAACTCATCATGATATCTAGAGAAA-----------TTTGAGTAAATTTCAG--TTCATTCTCATTTGTCTAATGCTTTCTTTCAAATA-ATTCAGAAAGCTCATTT-TGTAAAGGTCA------TGGTGAAATATTCTGGAAAGAATATCAAAAA-------GAATATTTTCG-------------GTGTTTTAAAAAGGAAACAAATGCAATGAATACATGGCAGTAGAGAAGATA--------AAGAATACAAAGGCGGACATAATTCTTATAGAAAGTAA----------------GTTTCTCAAAAGCCCACAAGTGAGTAAAAT-ATAAATCTAGCACATGAACATTATCTGCTAGCTTCCAACTTACTATCGAATTATAAAACTGTCATTCACCATCTGTCAGTATCCATGTATGGATATTTGTCTTTGTGGTG--TCACTGCAGGGAGCTGTAAGTATCACCATTACTATTCTTAATGAAGACCCTGTCTATGGGCATGCCTCCTGACAGCTTCTGTCCATATCATTCATT-ATTGTCAGCCTACA chr4 + 94230402 43925366 43925365 43925995 43925366 43925365 43925995 630 TAATATTGATTTGCTCAACTGCCCCGAGCAAAATGGATAGTATAATTTCTCTTAT---------GATTAGTAAATGCTCTGGCTCTGCTGGCTTTAT-------TTTTTAAATGG--TTGACAGAATGTTTTGGGGAAACAGACAGTCTTTTGAG--AATAGCAGCattaatttaaatttgtttaa--atttattttaGTTACATTTAGAACTATGATCCCTGCAAAGGTTTATACTTTGATGGAATGTGCTGATTAAATTTCCTAAAAATTTGATGATTCCTTTTACATAATGAGAAAATTATTTTAGAAAGAAAGTAACTGAATTTAACACA--GTAGCATCTATAATACTCGTGAAAAAGATGTAAAAGCAAATATGAAATTTATGAAAAAAAAACAACAGTGATTCATTGTTCCTCAAAAC--------TGGTTGAAACCATTAAATTGCTGCTGGAACATTCTCAGCAAGCTTCAAATGTATTTTTCAATTGTATGAGTATCATTCACCATCTGTCACCCCCCATATCTGGTCATTTATCTACATGATGACTCACTTCAGGCTGCTATTGGTATCACTGTT----TATTTAATGAGAACCCTGTCTATTTACCC-CCTCTTGACAGCTTGTATCCATATCATTCATTCATTGTCAGCCTGTA ....:.......::..x...x.:.::.:x::...::...xx..xx....::::..---------....x.x..x..:....::.:::xxx:.x...:-------...:x....::--.::x..x:..:.:.x.:.:..-----------......--...xx...--..x...:xx......:...--x...x...:.:x..-...:....xxx.x..::-..:......:x------..:..:...:.x...:xx.:.x.x:.x....-------..x.x:...::-------------x.:.....:....:..::..x..x.x.x..:...--.:..:.xxx.x:...--------..::..::...:..::.:..:.xx:....::...:x..----------------...:.......x--------..:x.:...:-..x..x:.:x::.xx.......x..x..x......x..:x..:.x.:x....:..x:.x.:.................x:x:....:.x...x:....:...x::..:..--.....x....xx...:.x:.......::..----.x:.......::...........xx:.x:-....:.........x.:...............-...........::. 55M9D33M7D11M2D21M11I6M2D8M2I19M2D14M1I17M1I11M6I31M7I11M13I34M2D15M8I38M16I12M8D10M1I110M2I30M4D29M1D32M1I14M 372/561 66.3% 630/94230402 0.0% 106/561 18.9% 127088273 63126282 +3245 chr4 + 190214555 171017032 171017031 171017174 143 CAGAATGACTGATATGTGTCTGAGTATATATATATGTATGTGTGTGTGTGTGTGTCTCTGTACATATGTATGTGTCTGTATATATATACACATATATATGTACGCATATATATACACAC----------ATATACCTATATGTATATATATTC chr4 + 94230402 85834512 85834511 85834649 85834512 85834511 85834649 138 CAGAATG--TAGTTTGGGTTT---TTTATTCATTTGTGTCTGTGTGTGTGTGTG----TGTATTAATGTA------GGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAATTC .......--.::.x..x..:.---.x...x:..x...:.x..............----....:xx.....------x.:...:....::.x...:..:.x..:...:.:...:.....:----------..x.x.:.x.:.:.:..:.x.... 7M2D12M3D30M4D12M6D43M10I24M 91/128 71.1% 138/94230402 0.0% 25/128 19.5% 85182520 NA +3338 chr4 + 190214555 171023608 171023607 171023704 97 GTGGTGGGTGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGTTTGAATCCGGAAGGTGGGGGTTCCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x::.--....:.:.........:..:........x.xx.x...x.::.....:..:....x.xx...:.x:..------:.x...:..... 10M2D67M6D12M 64/89 71.9% 89/94230402 0.0% 8/89 9.0% 94990407 NA +8203 chr4 + 190214555 171062639 171062638 171062880 242 TTAAAGGGTT-TCCCTGTATG-CTAACAACAAGACATCATAATGAATCTTAAAGATAGTGCATACAGACATATCAATATATTTGTTAATGCATTTTTCATGGCTGCCATTGCAGGAAGCTGG-ACTGGCCCTGACTGAGTGCATTCAATGTCATT-AAAGCGTAACAGAATTAATGAATAAGCAGCAAATGAAAGTCTAAAGCCCAACATAACAAAA-TTGGATAATATAAACACCATAATATATTT chr4 + 94230402 43935279 43935278 43935520 43935279 43935278 43935520 242 TTAAAGGGTTGTCTTTATATTTCTAATATCTAATCATACTAATGAATCTTGAAGATACTACACATAGCTATCCCGATTTATTTCTTAATGAATTTTT-ATGGTTGTCTTTTCAATAAGCTGGAACCATTCTTGATTGAGTTAGTCTGATGTACTTAAAAACATACCAGAAATAATGAGTAAGCAGTACATAAAATCACAAACCTTAACGTAACAAAACTTAGGTGGCAT----TCTGTAATATATTT ..........-..::.:...x-....:.x.x.:x...xx...........:......x.:..:.:..x:..x:.:..x.....x......x......-....:..:.x..x..:x.......-..::x:.:...:.....xx:.:::....xx..-...:.:..x.....x......:.......:.x..:...x:x:...x.::...:........-..:.:.:::..----x.::.......... 10M1I10M1I75M1D24M1I32M1I61M1I11M4D14M 169/237 71.3% 242/94230402 0.0% 10/237 4.2% 127127360 63087195 +3437 chr4 + 190214555 171066302 171066301 171066389 88 TATATGTTATATATATTTATATATGTTATATATATTTATATATAAGTTATATATATATTTATATACTACTCAGCCATTAAAAGGAACA chr4 + 94230402 65076267 65076266 65076351 65076267 65076266 65076351 85 TATATACTATAT---CCTATATACACTATATACATAAATACATAAGCTATGTGTATAGTAATATAATACACATTAATTAGAACAAGCA .....::.....---::......:::......:..xx...:.....:...:.:....x.x.....x...x..x:x....:..x:.:.. 12M3D73M 60/85 70.6% 85/94230402 0.0% 3/85 3.5% 105990035 84224520 +3467 chr4 + 190214555 171079766 171079765 171079847 82 ATGGTAGCACATGCCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATCACTTGAGCCCAGGAGCTAGAAGCTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::..:.::..:.--..:.:.:...........::........x.xx.xx..x.......:.....:....xx::....:.. 13M2D67M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 95046568 NA +25262 chr4 + 190214555 171110747 171110746 171111345 599 TATTACCTTCTATTGATCTTTTCTAATGCAAATATATTGCTGGCAAAATACACTG---------GAGATTTACTTGATCTCTTTATTGTTGTAGGACATGGCAATTAATTTTTTTATTGAGATTCCAATTAGCTTT-CTGCTCTTACAATGTTTTACCTAAATCCTTCTTTAAACTTTCC-CTAAGGTTACCGGAAAAACATCATCTAAGCATGACTGTATTAAAAGGTAGAAGTAAGG--AATGCATTACTTATGTTGTGTACAAAATTGAGGTTACTCTAGGTTAAATGAATCTGATTCCTTGAAGAGATAAAGATGCTTTAAATCATGAAGAACTAATCAGAAAATTCTAATTGAAAAAGAGGACCACAGTAGTCTATTATAAAAGGGGAGAAAGTGTCAA-ATTAGCACAACAGAGCAGGGAAATCTGAAAGAAA-TTTTGCAGACTGTTGCCATCATGACCCTTGTAAAAGTGTTGTTAAAGAGAGAAAAACAAAGGAAAAAGCCCTA----------------------------AGGAGGCGGACTTCATGATTAGGACCACCCAAGGAGAGTCTCTAACAAAAGAAAA----TTGAGTTCCATAATTGGAGGTGGTCTGCATGTGAAATTTTCAGATG chr4 + 94230402 43946890 43946889 43947527 43946890 43946889 43947527 638 TGTTTCTTTTTTTTTTTTTTTTTTGGCATCAGTATATTTCTGACAATGTACACTATGAGCATAAGAGGATGATTTGACCTCTTTATTGTAGTAGGATATGCCAATTA-TTTTTTTATTGAAATTTCAATTAGCTTTTCTGTTCTTATAATGTTTTACCTAAATCCTCTTTTTAAGTTCCTACTGAGGTTACTAGAAAAG-ATCATCTAAGCATGACTGTGCTAAAAGGTAGAGGTAAAGAAAATAAATTATTTCTATTGTGTACAAAATTGAGGTCACTTTAGGTTAACTGAATCGGATTCCTTCAAGAGATGTAGACCTTCCACATCATGAAGAATCATTCAGAGAATTCTAATTGAAAAA-AGAAAGACACCAGCCTCTTATAGAAAATAAAAAGATACCAAGATTAGTACAACTGAACAGGAAAACCTGAAATAGATTTTTACAGACCGTTGCCTTTATGACCCTTATAAAAGAAGAATTGTAAAATGAAAAACGATGGAGAAAGCCCTGCAGATTACAACTCTATATTAAACTGTCTAGCAATCTGAGTTCACAATTAGGACtaatttaaaaaa-----taaataaataaaaGCATTTAGGACTTATAATTACAATTCATTGGCACCTGAAATACTTCAATG .:..x.:..:.x..xx.:....:.:::::x.:......x...:...x:......:---------...:x.x.:....:...........x......:...x......-............:...:...........-...:.....:...................::...x..x..:.:-..:.......::.....:-...................::...........:....:.--...:x....:..x.:...................:...:........x......x........x.......:x...:x:.::.x...........::.x.....:................-..:.xx...x:..:..x.....:..::x:.:..::.::...-.....:.....x..:....:...:......x.:.-....:.....:......x.:.........:......x:xx:..:x.:.:x.......:.x...:........:----------------------------..x.:x.x..x....::........:.x::x.::.:.-----...xx...x....----..::.x:::......:x.:x.x:.:x...:x......x:.:x:... 55M9I43M1D28M1I43M1I18M1D39M2I121M1D41M1I34M1I73M28I37M5D13M4I46M 440/591 74.5% 638/94230402 0.0% 55/591 9.3% 127163857 63050698 +3007 chr4 + 190214555 171156610 171156609 171156667 58 TATATTTCTAAATATCTGCAATAATATCTAATTACATTTTTATTGTGAATGAGGGATT chr4 + 94230402 73645584 73645583 73645641 73645584 73645583 73645641 58 TATATTACTAGATATCTGCAGGAAAATTAATTTACACTTTTAAAGTAAATGAAAGATT ......x...:.........:x..x..:x.x.....:.....xx..:.....::.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 97511026 92703529 +3060 chr4 + 190214555 171185108 171185107 171185158 51 TGGTAAAATAACAAAAACAAACAACAACAACAAAAAAGAAATAACAAAACA chr4 + 94230402 17617510 17617509 17617560 17617510 17617509 17617560 51 TGAAAGAGTAAAGAAAACCAACAACAACAACAAAAAAAAAAAAACAACACA ..:x.:.:...x:.....x..................:...x.....x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 153567598 36646957 +3357 chr4 + 190214555 171188761 171188760 171188889 129 CTGCTTATTTTCATGTTAATGCTATAATCATCTA-AATGCTTTTCCTCCTCCCTAT----------AAATACCTTATGGTTTCTTTA-ATGAAAATGAGAACAACAACAACAACAAAAAAAAAAAAAAAAAAGGGAAAGAA chr4 + 94230402 92559580 92559579 92559716 92559580 92559579 92559716 137 CTGCTTATTACCAGCTTGA----ATAATCGTTTGGAATGCTTCGTTTGACATTTATTCAAGAACTTGGAAACCACACAGTTTCTCTCTCTGGAGAGGATGACAACAACAACAATTAAAGAAAAAAAAAAAGAAAGAAAAAA .........x:..xx..:.----......:.:.:-.......:x::.xx:x::...----------::.x...x:.::......:.x-x..:.:.x..x:.............:x...:...........:.::....:.. 19M4D11M1I21M10I21M1I53M 85/125 68.0% 137/94230402 0.0% 16/125 12.8% 78629181 NA +3220 chr4 + 190214555 171188816 171188815 171188880 65 AAATACCTTATGGTTTCTTT--AATGAAAATGAGAACAACAACAACAACAAAAAAAAAAAAAAAAAA chr4 + 94230402 73664692 73664691 73664758 73664692 73664691 73664758 67 AAAACTCTTGGGGTCTCTGTCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAA ...xx:...:x...:...x.--...x.x..x:::......:.......................... 20M2I45M 51/65 78.5% 67/94230402 0.0% 2/65 3.1% 97524124 92690431 +3542 chr4 + 190214555 171217123 171217122 171217223 101 AACACCATTCTCAGAAAACAAACCAAAAGGAAAAAAAAAGAGGAAAAAAAACAATAAAAAATAAACAAACTTAAATGGATGTCAAAATAAACCTCACTTAT chr4 + 94230402 72525449 72525448 72525540 72525449 72525448 72525540 92 AACAATATTTTCAGAAATTAAATCATTAAAAAAAAAAAAGAGGAAAAGAAAAAATA------AAACCAACCCCAGAGGCTGATTA---GAACCTCATTTAT ....x:...:.......x:...:..xx.::.................:...x....------....x...::x.:x..x..x:x.---:.......:.... 56M6D23M3D13M 68/92 73.9% 92/94230402 0.0% 9/92 9.8% 98691674 91522881 +3009 chr4 + 190214555 171220220 171220219 171220308 89 ATATATATATATATATATATATATATATATTTCTTTATATATATATTTCTTTATATATATATATTTGTGTGTGTGTCTGTGTATATATA chr4 + 94230402 89812969 89812968 89813057 89812969 89812968 89813057 89 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTA .....x...x....:.:.....x..x..:::.:xx..:..:.::.xx:::::..:::...:.x:............x.:.:...:.x.. 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% 81407251 NA +3818 chr4 + 190214555 171220266 171220265 171220358 93 TTCTTTATATATATATATTTGTGTGTGTGTCTGTGTATATATATACACATATATACATACATATATATACACATATATATACATACATATATA chr4 + 94230402 85834528 85834527 85834612 85834528 85834527 85834612 85 TTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTAT-----TA---ATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ..:.....x:..x.:.:.:...........x.......-----..---..:..x:.........:..x.:....:.x...:..:.....:.:. 38M5D2M3D45M 65/85 76.5% 85/94230402 0.0% 8/85 9.4% 85385738 NA +3710 chr4 + 190214555 171220342 171220341 171220452 111 ATATACATACATATATATCCACATATATATACATACATATA------TATACACATATATATACATACATATATATATACACATACATATATATATATACACACATACATATATATA chr4 + 94230402 25906335 25906334 25906451 25906335 25906334 25906451 117 ATATTCAAACATGAATATTCCCATAACCAAAAATACCTCTGGTTTTCTTTACATATCTGTCTGCATACATGTAAACGTGCACACTTCTATCCATATATAAACACATGCTTATACATA ....x..x....:x....:.x....xx:.x.x....x.x.:------.x....:..x.:.x.:.......:..x.::.:....:x:x...x:.......x......:.x....:... 41M6I70M 76/111 68.5% 117/94230402 0.0% 6/111 5.4% 145314007 44900548 +3106 chr4 + 190214555 171220350 171220349 171220420 71 ACATATATATCCACATATATATACATACATATATATACACATATATATACATACATATATATATACACATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...:.:....:.....::.x.:....:....:.x.x.:.::.....x.:::.:::.....::..:...:.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 148620152 41594403 +3116 chr4 + 190214555 171220389 171220388 171220511 123 CATATATATACATACATATATATATACACATACATATATATATATACACACATACATATATATATATATATATATATATATATATATATACACACACACACAGACACACACACAAATATATAT chr4 + 94230402 91734575 91734574 91734697 91734575 91734574 91734697 123 CATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ......x...::.x:x:x...:xxx:..:...x....:.x.x:x..::x.xx..:..x...::....:...xx...x.x.x:.x..:.x.x.:...:...x.:...:.:...::.:....... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% 79485814 NA +3267 chr4 + 190214555 171220416 171220415 171220486 71 ACATACATATATATATATACACACATACATATATATATATATATATATATATATATATATATACACACACA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA ...:......x:.:..::.x......:....:.x.x....:.....x.:.:.:.:.....::.::...::. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 148620218 41594337 +3307 chr4 + 190214555 171220452 171220451 171220514 63 ATATATATATATATATATATATATATACACACACACACAGACACACACACAAATATATATAGC chr4 + 94230402 61270775 61270774 61270837 61270775 61270774 61270837 63 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGC ..:x......x.:.......:.......:...::..........x..:::.x.x:..:.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 109949677 80264878 +3139 chr4 + 190214555 171220461 171220460 171220500 40 TATATATATATATATATACACACACACACAGACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.............:.........x........... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 166811379 23403176 +3017 chr4 + 190214555 171220463 171220462 171220502 40 TATATATATATATATACACACACACACAGACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:...........:.:...........x......... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 166811381 23403174 +3102 chr4 + 190214555 171263663 171263662 171263730 68 CATTATTTCTTCAAATATTCTCTCCCTCTGTTCTTTCTTCATCTTTTTTTTTTCTTTTTTTTTTTTTT chr4 + 94230402 84739511 84739510 84739578 84739511 84739510 84739578 68 CAATCTTTTATCAAATTTTCTTTCTCTCCCTGCTTGCCACCTCTCTCTTTTTTGTATTTTTTTTTTTT ..x.x...:x......x....:..:...:x.x...x.:x.x...:.:......x.x............ 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 86524152 NA +3083 chr4 + 190214555 171263685 171263684 171263735 51 TCCCTCTGTTCTTTCTTCATCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907959 56907958 56908009 56907959 56907958 56908009 51 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTT ...x:.:x...:.:..:......:.:.:.:................:.... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 114355726 75858829 +3408 chr4 + 190214555 171266042 171266041 171266119 78 TTTTCCTCTCCTTCCCTCACCTTTCCCTCCCCTTCCTCCTCCTCTTCTTTTCTCCTCCTTTTTTTCTTCTTCTTTCTC chr4 + 94230402 53757784 53757783 53757861 53757784 53757783 53757861 78 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCC ..:..:..:x::.:::......:.:xxx:...::..:..:..:.:..:...:.::.............:..:..:.:. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 117508258 72706297 +3780 chr4 + 190214555 171268423 171268422 171268547 125 TGTTTTTTTCCTTTCCTTCCTTCCTCCCGTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCT---CCCTCCTTCCTTCCTTCCTACGTTTCTTCTCCTTCTCCTTCTGGTT-CTCCTTCTCCTCATTCT chr4 + 94230402 38895888 38895887 38896013 38895888 38895887 38896013 126 TGTCTCAACCCTTTGCATCACCTCTCTTTTCCCTCATGCC--CCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTA-TATATTACTTCTCCCTCCTCTTCTGGTTACTCCTTATCCATCTTCT ...:.:xx:.....x.x..x:::...::x...:..x.x..--..x.::..::..:...::..---:.:.............x-..::..x.......:..::.........-......x...x:x.... 40M2D20M3I17M1D28M1I17M 84/122 68.9% 126/94230402 0.0% 7/122 5.7% 132372535 57842020 +3156 chr4 + 190214555 171268572 171268571 171268623 52 TTTCTTTCTTTCTTTCTTTCTTTTCTTTTTTTCTTTCTTTCTCTTCTCAAAA chr4 + 94230402 51335345 51335344 51335396 51335345 51335344 51335396 52 TCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAAAA .:..x....:.....x...:..:.:........:.......:::.:...... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 119933227 70281328 +6421 chr4 + 190214555 171338750 171338749 171338895 146 ACTGGCAGCAAACACTGAAATGAGTTATGGAGCCTGACATCTAATTAACACAGTCT-TTATAGGTTTAATGAGCAGTGATAAATTTCTATCCTTTTTTTGGCACATTTTAATTAGTTGTAATTATGAGTGGAGTGACCTGAAAAGAT chr4 + 94230402 43879502 43879501 43879641 43879502 43879501 43879641 140 ATTGTCAGCAAACACATAAATGAATTATGAAGGGTGACATCCAATTAACACAGACTGTTACAGGTTTAATAAGCAATCATAAATTTAAATGGTTTCTTTGGCACTTTTAAA----GTGAAATTACAAGTGG---GTTTTGACAAGAT .:..x..........xx......:.....:..xx.......:...........x..-...:.........:....:.x........xx..xx...:........x...x..----x..x.....::.....---.x::...x..... 56M1I54M4D16M3D13M 110/139 79.1% 140/94230402 0.0% 8/139 5.8% 127459248 62755307 +3128 chr4 + 190214555 171384926 171384925 171385003 78 TTCTTCTCCTCCTACTCCTCCTTATTCTCCTCCTCCTCCTTTTCCTCCTCCCCCTCTTCTTCTTCTTCGTCTTCCTCT chr4 + 94230402 68929821 68929820 68929898 68929821 68929820 68929898 78 TTCATCCCTTCTTCCACGGGGTTATTTCCCATTTACCCCCTCCCTCCCCCCCCTTTTTTTTCTTCTTCCTCTTCCTCT ...x..:.:..:.x.x.xxxx.....::..x::.x.:..:.::.::..:....:.:..:.........x......... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 102455105 87759450 +3099 chr4 + 190214555 171384943 171384942 171385016 74 CTCCTTATTCTCCTCCTCCTCCTTTTCCTCCTCCCCCTCTTCTTCTTCTTCGTCTTCCTCTTCTCCTTCCCCTT chr4 + 94230402 34908182 34908181 34908255 34908182 34908181 34908255 74 CTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT .....x:.:.x::..........:....x....::......xx..x:.xx.:.x...x..x..x:.....:... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 136476761 53737794 +3223 chr4 + 190214555 171395409 171395408 171395542 134 CTTTCTGGTTTGATATTTGTGTGACTTTTGCCATTTATATCAATAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGT-ATATATATATATATATGTA chr4 + 94230402 79265478 79265477 79265608 79265478 79265477 79265608 131 CTCTACAGATTGATAGCTGT---AGCTGTCCTATTCA-GTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCA ..:.x::.x......x:...---.x:.x.x.:...:.-:....:.:............::........xx...:.:.::...:.::.:..:::::.::x:::.:.x.....x:::-.:.:x.x......x...:. 20M3D14M1D77M1I19M 79/130 60.8% 131/94230402 0.0% 5/130 3.8% 92129931 NA +3203 chr4 + 190214555 171395448 171395447 171395531 84 TCAATAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 85834532 85834531 85834615 85834532 85834531 85834615 84 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x.x..x.....x.................:.xx:....x::...:..:...:x:.:::...x.:..::::::..:.:.:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 85560916 NA +3023 chr4 + 190214555 171395455 171395454 171395551 97 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT----------ATATATATATGTATGTATATAT chr4 + 94230402 85834541 85834540 85834647 85834541 85834540 85834647 107 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT .....x.................:.xx:...:x::...:......:x:.:::...x.:..::::::.::.:.:..----------..x.x:x.x........:.x.. 75M10I22M 62/97 63.9% 107/94230402 0.0% 10/97 10.3% 85560914 NA +3004 chr4 + 190214555 171395456 171395455 171395538 83 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTAT-ATATATATATATA chr4 + 94230402 79265519 79265518 79265602 79265519 79265518 79265602 84 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATA .............::........xx...:.:..:...:.::....:::::.::x:::.:.x.....x:.:-.:.:x.x...... 70M1I13M 53/83 63.9% 84/94230402 0.0% 1/83 1.2% 92129937 NA +3539 chr4 + 190214555 171395458 171395457 171395602 145 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATAT-ATATATATATATGTATGTATATATATAGTTTTAAGGCCTCTATTCTCTCCCTGTAAAAACTCAGTCAATTGAATT chr4 + 94230402 79265519 79265518 79265662 79265519 79265518 79265662 144 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCAC-TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAG-CACTTGTATT .............::........xx...:....:...:.:.....:::::.::x:::.:.x.....x:.:-.:.:x.x.....:x...:.:-.x.::xx....:..xx:x.x.x.x:x.::......:x:.....-..x...x... 70M1I20M1D43M1D10M 89/143 62.2% 144/94230402 0.0% 3/143 2.1% 92129939 NA +3211 chr4 + 190214555 171395460 171395459 171395558 99 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATAGTTT chr4 + 94230402 79265519 79265518 79265612 79265519 79265518 79265612 94 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-----ACACCTCTATATAAATGCACTTT .............::........xx........:...:::.....:::::.::x:::.:.x...:.x:.:.-----.:.:x.x.:....x..::.x... 71M5D23M 60/94 63.8% 94/94230402 0.0% 5/94 5.3% 92129941 NA +3121 chr4 + 190214555 171395461 171395460 171395535 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 85834541 85834540 85834615 85834541 85834540 85834615 75 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .....x.................:.xx..:..x::..:::.:...:x:.:::...x.:..:::.:...:.:.:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 85560920 NA +3187 chr4 + 190214555 171395465 171395464 171395529 65 TGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx...:.::::x..x.:x..x..............:.........::..::...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 144069973 46144582 +3413 chr4 + 190214555 171395465 171395464 171395604 140 TGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATAGTTTTAAGGCCTCTATTCTCTCCCTGTAAAAACTCAGTCAATTGAATTCT chr4 + 94230402 85834541 85834540 85834661 85834541 85834540 85834661 121 TGTGTCTGTGTGTGTGTGTGTGTATTAA--------------TGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGT--ATGTACAAATTC---CACTTGAATTCT .....x...................xx.--------------...:x.::.:::.:....x...:..:.x...::::.::..:.:.:..:.::.x::.:x:.:.x....x.--x....x...:..---..x......... 28M14D69M2D12M3D12M 81/121 66.9% 121/94230402 0.0% 19/121 15.7% 85560924 NA +3064 chr4 + 190214555 171395475 171395474 171395531 57 TGTGTGTGTGTGTATATA--------TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 + 94230402 27325492 27325491 27325556 27325492 27325491 27325556 65 TGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT ..:..:..xx......:.--------..x..:...........:.........::...:...... 18M8I39M 46/57 80.7% 65/94230402 0.0% 8/57 14.0% 144069983 46144572 +3311 chr4 + 190214555 171395489 171395488 171395554 66 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATA chr4 + 94230402 85834533 85834532 85834598 85834533 85834532 85834598 66 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA ...x:..x.....x.................:.xx..:..x::...:.......x:..:..:.x.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 85560956 NA +3229 chr4 + 190214555 171395493 171395492 171395557 65 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATAGTT chr4 + 94230402 85834533 85834532 85834597 85834533 85834532 85834597 65 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT ...x::.x.....x...................xx..:..x::...::......x...:..:x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 85560960 NA +3198 chr4 + 190214555 171395497 171395496 171395570 74 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATAGTTTT------AAGGCCTCTAT chr4 + 94230402 79265520 79265519 79265599 79265520 79265519 79265599 80 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTAT ............::........xx........:...:.::.:..:.:::::.x.:...x..x.------..x:....... 63M6I11M 53/74 71.6% 80/94230402 0.0% 6/74 8.1% 92129977 NA +3068 chr4 + 190214555 171395500 171395499 171395548 49 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATA chr4 + 94230402 79265519 79265518 79265567 79265519 79265518 79265567 49 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACA .............::........xx.:......:...:.:..:..:.:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 92129981 NA +3412 chr4 + 190214555 171401699 171401698 171401772 74 GTGCGCTTGTAGTTCCAGCTACTAGGAAAGCTGAGGCATGAGAATTGCTTGAAGCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x................x.:..:......x.x..x...x::......x.::.:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 95368495 NA +7563 chr4 + 190214555 171402785 171402784 171403071 287 TATAATAATATGCATTATGATCCAAGCTGGCTACTCTATTAAGGCTATTTGAAATTATGGTAATAA-TAAAAAGG------TAATTTTACCCATACAAGAGAGAAATTGGAG-AATGGTAACCATTCATATTGATTTTAT--CAACTTGATAGCATTTTGCCATTCTTCACATATTTATCAGCCTGCTGACTTTTAATTTCCTAGGGATTATAATATATTTGATGTGACTCTTACAGCAAGTATATTAGTAAGTCAAGATCATACAAATTACACTAAATATATACCATTCAGATATA chr4 + 94230402 44077130 44077129 44077403 44077130 44077129 44077403 274 TAAAATGAACTGCACTAT------AGTTTGTTTTTATAT---GGTTAATCTAGAAGATGttaataaataaaaaagaaaaaataattttaCTGATACTTGAGGGAATCTAGAGTAGCGGTAA---TTCATATTAATTTTATATCAACTTTACAATGTTTTTGTCATCTTGACACATTTATGGAGCTGTTAAATTTTTGCTGTCTGGGGGATATAATGTACTTGATGTGAC-CTTAC----------TTATTAAATCAGAACCATGCAAATAACATTGATGACATGTCATTCAAGAATA ..x...:.xx....:...------..:.x.:.x:.x...---..:..x.:x.:.xx...x......-......:.------.........:x....xx...:...x:.:...-.::.....---........:.......--......x.:.:::....xx:xx....x...:......x::x...:.:.x....x::.x:..:...:x......:..:..........-.....----------...x...:...::.:...:.....x...:.:.xx.:..::......::x... 18M6D15M3D24M1I8M6I31M1I8M3D16M2I87M1D5M10D52M 187/264 70.8% 274/94230402 0.0% 33/264 12.5% 127325655 62888900 +3146 chr4 + 190214555 171410761 171410760 171410819 59 TTTTTATAGCATATATATACACACACTCACATATATATATATGTACACACACACACACA chr4 + 94230402 46140848 46140847 46140906 46140848 46140847 46140906 59 TTTGTGTAATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...x.:..::.......:......x........:.:.:.::....:.:...x..x:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 125269913 64944642 +3590 chr4 + 190214555 171410770 171410769 171410848 79 CATATATATACACACACTCACATATATATATATGTACACACACACACACACAC-------------ACATATATACACATATATATACTATA chr4 + 94230402 23247721 23247720 23247812 23247721 23247720 23247812 92 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATA ...:.:.:..::.....x..:x...:x.:.............:..........-------------....:x...x.:........:xx... 53M13I26M 60/79 75.9% 92/94230402 0.0% 13/79 16.5% 148163049 42051506 +3232 chr4 + 190214555 171410796 171410795 171410857 62 TATATATGTACACACACACACACACACACATATATACACATATATATACTATA---TATATGTTT chr4 + 94230402 89823932 89823931 89823996 89823932 89823931 89823996 65 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTT ........x.:..................x....xx:.:.....::..:.x.:---......:.. 53M3I9M 49/62 79.0% 65/94230402 0.0% 3/62 4.8% 81586864 NA +3498 chr4 + 190214555 171410840 171410839 171410909 70 TATACTATATATATGTTTTATATATATACACGTATATGTACATATATATGTTTGTGTGTATATATATACT chr4 + 94230402 43288464 43288463 43288533 43288464 43288463 43288533 70 TAGAATACGTATGTATTCAAAATATATACATGTATAAATGCATATATGTGTTTGTGCATATATAGAGATT ..x.x..::...:.:..:x.x.........:.....x:.:.......:........::......x.x.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 128122376 62092179 +3002 chr4 + 190214555 171410862 171410861 171410921 60 TATATACACGTATATGTACATATATATGTTTGTGTGTATATATATACTATATATATGTTT chr4 + 94230402 68737222 68737221 68737281 68737222 68737221 68737281 60 TATATACCTGTATATGTACATATATGTATGTATGGGTAAATAAATATGCTGTTTGTGTTT .......x:................:.:.x.:..x...x...x...:xx.:.x.:..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 102673640 87540915 +3520 chr4 + 190214555 171411239 171411238 171411306 68 GTGTAATTCCAGCTGCTTGGGAGGCTGAGGCTGGAGAATCACTTCAACCCGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033210 76033209 76033277 76033210 76033209 76033277 68 GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:........:....::........x.:x.x...x.....x.....:....x:xx:..:..:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 95378029 NA +3251 chr4 + 190214555 171414594 171414593 171414654 61 GTGCCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCAAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x.x....:.:...........::........x.xx.x...x.:......:.x..:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 95381390 NA +3927 chr4 + 190214555 171422037 171422036 171422138 102 TTAACCTCAAAATTGTCCTATGA------GAAACAGCATTT-CTTCAGTTTTTAAAAGGAAATTGAGGCTTAGAGATACTAAATGATTTACCCAATGTTACCCACCTTA chr4 + 94230402 59456156 59456155 59456264 59456156 59456155 59456264 109 TTATGCTCATAACTCTTCTGTGAAGCATGGAAATATTATTTTCATCAGTTTTGAGAAGGAAAATGGGTCAGAGAAATAGTAAATGATTTGCCCAACATCACAAACCTCA ...xx....x..:.x.:..:...------....:.x:....-.x........x.:.......x..:.x.xx...:...x..........:.....::.:..xx....:. 23M6I12M1I67M 75/102 73.5% 109/94230402 0.0% 7/102 6.9% 111965881 78248674 +3211 chr4 + 190214555 171429236 171429235 171429312 77 ATGTGTATATATACATACAGACACATATTTGTACATATATGTATGTATATACATACATGCACACATATATACATATA chr4 + 94230402 41749091 41749090 41749167 41749091 41749090 41749167 77 ATGATTATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ...xx......x...:...x.:.x:.x.x.:.xx:...:..::.:.:............:..:.x.....x...:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 129680145 60534410 +3032 chr4 + 190214555 171431708 171431707 171431774 67 TACTTTTTTTTTTTTTTTACTTACATATGTTTTATTTGGATGTGAAGAAGTAGAAAAAAAACAGGAA chr4 + 94230402 66237242 66237241 66237308 66237242 66237241 66237308 67 TACTTTTTTTTTTTTTCTACTTTTTTTTTAATTTTTCAAGTGAGAGAAAGAAAAGAAAAAACAGGAA ................:.....x:x.x.xxx..x..::::..x..::...x.:.:............ 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 105194466 85020089 +3024 chr4 + 190214555 171451801 171451800 171451861 61 ACTCCGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAACGGAAAA chr4 + 94230402 77983238 77983237 77983298 77983238 77983237 77983298 61 ACCCCCTCCCCCAAAAAAAAAACAAAAAAACAAAACATGAGATAAAAGCAGAGACTGAAAA ..:..x..:..x..........x.......x....x.x:...x..:.:x...:..x..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 93468563 NA +13357 chr4 + 190214555 171462405 171462404 171462879 475 AACTTATATTTTTT-TATTAAGACA--TTAATAACTTGAGAGTTAAATGTATACTATATAAAACATGTTTCATCTTGACATGTATAGATATTCTATGATTCTCATCAAAGAATGTCACTCTGGGTTTTAAATCTGTTCTTATCACCCAGAAGATCTTATCTGGTCAGTATTTGATTAGAGAATCTAGCTACCTAAGACAGGTTTTCTTCATTTGATAGATAATCTGGAGCTTCAAGACTATTGATTGAAGCTGCATTCAAGTAAAAAAAAAAAGTTAAGAAAAAAAGTGGAAGTTAA-CCTTGACTACACTTCAACCTTCAACTTCTGCTGCCTTGAGTCAAACAGCTAAATATGTCCCTGTCTTATCACCACAGATTTTTTCATATTGACTGAAAAACAAACTTCAAATGCATTTTAGCCTGATTATTTTTTGAAAATATCATTTAAGAGTAAAAGAATCCTTGATCTTCTCTCTTTC chr4 + 94230402 44090328 44090327 44090764 44090328 44090327 44090764 437 AGCTCATATTCGTTATATTTAGAAAAGGTAATAAATTGATTGAAAGGCTTAGGCTGTATCATTTATCTTACATCTTGACTTTAACAGTTAGGCTATGATTCTCATAAAAAAATGTCACTTTGGATTTTAAATCTATTTTTATCTTCTAGAACATCTCATCT-GTCAATATTTGATTAGAGGTCTTCACTGCTTGAGACAGCTTTTCTCTATCAGAAAGATAATCTGAAGCTCTGAGACCATCAATTGAAGTTTCATCTCTAGAAGGAGGAAAAAT-----AAAATGCTAGGAGATAATTTTTGATTACTCTTCAACCTGTGACTTCTGCT---TTGAGCCCAATAG--AAA---GTCAGAATCTTCTTATCACAG-----------------TGAAGACAGACTTGATTT---TTTTTTCATAATTACTTTTT-----TCTCACCTAAGGTTAAAGCAAAGT---ACCCTTTCTTTTTC .:..:.....:x..-....x...x.--x......x....xx.xx.:::x..x:..:...x.xx:..x..x.........x.xx.:..x..xx.............x...:.........:...:..........:..:.....x:.:....x....:....-....:.............:x::.x:..:.:.:......x......::..:x..x..........:....:::....:..::.......:.x...::xx:x..::.::....:.-----....x:x.:.:..x...-::....:...x.........x::.........---.....:.x..:..--...---...xxx:....x.:.:.....-----------------x:..:...:....x.xx.---....xx.x.:....:.....-----.x...::....:x....:x..xx:---.:.:.:...:.... 14M1I10M2I134M1D113M5D17M1I32M3D13M2D3M3D21M17D18M3D20M5D24M3D14M 305/433 70.4% 437/94230402 0.0% 46/433 10.6% 127372077 62842478 +3584 chr4 + 190214555 171464018 171464017 171464089 72 GTGCCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAGGCAGGGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........:.........x.xx.x...x.::........:.:..x:xx...:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 95430812 NA +3191 chr4 + 190214555 171500536 171500535 171500642 107 TCAGACAAAAGAAGAAGTGAAAGAGTAAGAGGAGAAGAAGGAGGATGACAAAAAGGAAGAAGAGGAAAAAAAGAAGAGGAGGAAGAAATGTTTTTAAATGAAGAAAG chr4 + 94230402 24042735 24042734 24042841 24042735 24042734 24042841 107 TTAGGCAACAGTAGGAGTGAAAGAGTAAAAGTAGTAAAAGAAAAAAGGTAGAAAACAAGGAAAAAGAGACAAACAGAAATCATACAAACATACAGAAACAAACAAAG .:..:...x..x..:.............:..x..x.:...:.::.x.::.:...:x...:.:.:::.:.x..:x...::xx:x.x...::.x:xx...::..x.... 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 147457801 42756754 +3001 chr4 + 190214555 171528804 171528803 171528864 61 ATATATTCATATATATGTATATACACACTTACATGAACACACATACTTACATGTATGTCTG chr4 + 94230402 61270779 61270778 61270839 61270779 61270778 61270839 61 ATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTG .......::...............:...x....:::....x...::x..x:.::.::x... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 110258025 79956530 +3033 chr4 + 190214555 171535819 171535818 171535861 43 AAAAAAAAAAAAAAAAAAAAAAGAATTGAAAGATTTGGAAAAT chr4 + 94230402 91279344 91279343 91279386 91279344 91279343 91279386 43 AAAAAAAAAAAAAAAGACAAAGAAATTGAAAGAATTGAAAAAT ...............:.x...::..........x...:..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 80256475 NA +3234 chr4 + 190214555 171542811 171542810 171542871 61 TAAATAGATGTAGATATGTGTATATACATACACATACATACATATATATGCACATATATTT chr4 + 94230402 68837088 68837087 68837148 68837088 68837087 68837148 61 TAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTT ...:x.x:...:x:.:.....:.:....:...x...........:.:.......:..x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 102705723 87508832 +3132 chr4 + 190214555 171550740 171550739 171550821 82 TTACCACACAAGTCAAATTTTTTTCCTGCCCCCTTTTATTTCACACTTGGACTTTTCCATTTGACAAGCAAGTATTAGGTTT chr4 + 94230402 57480796 57480795 57480877 57480796 57480795 57480877 82 TTTCCACATAAGTAAAATTTTTCTCCTTCAATCTTCTTGTGAACACTCTGACTCTCCCATTAGCCTAGTAAAAGCTGGGTCT ..x.....:....x........:....x.xx:...:.xx.xx.....:x....:.:.....x.x.x..:..:x::.:...:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 114069944 76144611 +3126 chr4 + 190214555 171563073 171563072 171563126 54 TTGTTTTTTGTTTTCTGTTTTTGTGGTTTTTTTGTTTGTTTGGTTGGAGTTTTT chr4 + 94230402 69452113 69452112 69452166 69452113 69452112 69452166 54 TTGTTTTTAGCTCTTTTTCTTCTTGCTTTTTTTGTTTGTTTGGTTGGTTTTTTT ........x.:.:.:.x.:..:x..x.....................xx..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 102110960 88103595 +23368 chr4 + 190214555 171602904 171602903 171603461 558 AACATTAGTCTCCTCATCTAACACCGT--TAAATAAAGAGGTGTAGCATTTGCTATGG--ATAAGTCTTTTAATTGTATTGCATGTTTTAAAATTGCAGCTGAATATAATATAATTTTAGTAGCTCATTTCTCCTGAGGCATCAACATCATTTATCACTCCTGCTGCCATCTGGCGTGTCTGAACCATCATGATCAGCAGTTTATGTGGAAATTAAAACATTCAGTG-GGTCGCTCTTCAATAATGCTCTGAGGTCAGGGACAATATTGCTAGCAGCAGTGAAGATGCATTTTTATTGCACACTTGAGAGGCATCCGTTTGACGTACTTTATAGCTTTCTAGGTTAAGACTAGCCAAG-TTTCCCTTATTTGCACCGACCTGACATGGGGGTCATTCCATATAATAACTATCTAAGGATCATTCAGAGTAATTCCCCCTTGCTATCGTGCTTATGCAGCTACATTCAGATAAAAGCGCAGCAGCAGTAATAAAAGTCCCATTCTCTCTCTCTCTGATTGCTTGTTTGTTTTCTCTG-------TTAAAGAATTCAGAAACAGCAAGAAAAT chr4 + 94230402 44120633 44120632 44121183 44120633 44120632 44121183 551 AACTTTTCCCCCCATATATGACATGGTACTGAAATATGAGGTGCATGATTTTGCAGGAGAATAACAGTTTTAACTACATTACATGTTTCAAA-TCCCAACTGAACATAATATAACTTTACTAGCTCATTTCTCCTGAGGCATCAACACCATTTATCACTACTACTGCCATCTGGCATGACTGAACTATCATGATCAGCATTTTATGTGGAAATGAAAGCCTTCAATATGGTCTCTCTTCTCTAATGCTCTGAGGTCAGATACAATACTGCTCAAGGCAGCAAGGATGCATTTTTATCACACACTTGAGAGGCATCCATTTGATATATTTTATAGTTTTCTAGCTTAGGACCAGACAAGCTTTTTCTTATTTGCACTGACCTGACAT-GGGGTCGTTTGCTGCAATAATAATCTCAGATTCATTCAGATAAGTTTTGTTACACTGCAGTATTCAGAAGACTACATGCAGCTGCATATTTAGATGCTGAAAAA------CAATTTTCT---------AGTACTTTTTTTTTTTTTCTGTGTTACTTTAGAGAAT--AGAAA-GGCAATAAAAT ...x..xx:.:..x:..x.:...:x..--.:..xx.x......:.xx....xx:.x.:--....xxx......:.::...:.......:...-.:x..:.....:.........:....x...........................:...........x..:............:..x......:.............x.............x...:.x....:.:-....x......xx.................:x......:....x:x:....::.:.............::..................:.....::..:.......:.......x...:...:..x....-...::...........:..........-......:..:xx.::.....:x....x..:x.........xx.:..::x::x::..::x..::.:.x:x::......x...x.:x.x::x:..xx..x.x..x.------.x...:...---------.x.:...x...x....:....-------...:.....--.....-:....x..... 27M2I29M2I32M1D134M1I130M1I27M1D104M6D9M9D21M7I9M2D5M1D11M 405/538 75.3% 551/94230402 0.0% 33/538 6.1% 127482271 62732284 +3356 chr4 + 190214555 171611456 171611455 171611553 98 GAAATTGAAACAACAGCAACAACAACAAAATATATATAAAAGATAAATAAAAGAAAAAG-------CTAGTTCTTTGAAAAGATTAACAAAATTGATGGATCATT chr4 + 94230402 60531191 60531190 60531295 60531191 60531190 60531295 105 GAAATTCCAACAACAACAACAACAAAAAAATTGAAATGAACTATAAATAAATGGAAATGTCTGGACCTTGGTCTTTTACATGAGCTACAATGCCAGTGGATGATT ......xx.......:.........x.....xx.x..:..xx.........x.:...x.-------..x.x.....x.x.x..x:x....x:::::.....x... 59M7I39M 70/98 71.4% 105/94230402 0.0% 7/98 7.1% 111080265 79134290 +3304 chr4 + 190214555 171644217 171644216 171644307 91 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAA-ATATATATATATATATATAT------ATAAAATACAT chr4 + 94230402 15362537 15362536 15362633 15362537 15362536 15362633 97 AGAAAAAAAAAAAAGAAAAAAAAGTGAAAATAAACTTAGCTTCATCTAT-TTTATGTAGATGTGTATATATATATATACATGAAAAAATAAATAACAT .:............:........:x:......x.:x..xx.x:..x...-.x...:..:.-:.:..............:..------.....xx.... 49M1D10M1I20M6I11M 69/90 76.7% 97/94230402 0.0% 8/90 8.9% 156281680 33932875 +3100 chr4 + 190214555 171644219 171644218 171644298 80 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAATATATATATATATATATATAT chr4 + 94230402 15362537 15362536 15362616 15362537 15362536 15362616 80 AGAAAAAAAAAAAAGAAAAAAAAGTGAAAATAAACTTAGCTTCATCTATTTTATGTAGATGTGTATATATATATATACAT .:............:........:x:..x...x.:x..xx.x:..x...x.xxxxx.:..:.:..............:.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 156281682 33932873 +3212 chr4 + 190214555 171644221 171644220 171644275 55 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAA chr4 + 94230402 90030076 90030075 90030130 90030076 90030075 90030130 55 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTAA ...x.......xxx:...::..............:.:.:............x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 81614145 NA +3290 chr4 + 190214555 171644221 171644220 171644277 57 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:......x........:.:..:...:.....x....:x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 170149221 20065334 +3376 chr4 + 190214555 171644223 171644222 171644274 52 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:...............:.:..:...:.....x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 170149223 20065332 +3381 chr4 + 190214555 171644223 171644222 171644308 86 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAATATATATATATATATATATAT-------AAAATACATA chr4 + 94230402 15362537 15362536 15362629 15362537 15362536 15362629 93 AGAAAAAAAAAAAAGAAAAAAAAGTGAAAATAAACTTAGCTTCATCTATTTTATGTAGATGTGTATATATATATATACATGAAAAAATAAATA .:............:........:.:x.x...x.:x..xx.x:..x...x.x.x:..x..:.:.............-------......x... 76M7I10M 64/86 74.4% 93/94230402 0.0% 7/86 8.1% 156281686 33932869 +3003 chr4 + 190214555 171644225 171644224 171644272 48 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495047 1495000 1494999 1495047 48 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATA ...x.:.........x.:....x..........:.:..:...:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 170149225 20065330 +15368 chr4 + 190214555 171649223 171649222 171649742 520 AAAAAAAGAAAAGAAGAAAAATAAAGAAGT-TAAACACTGAAGAGT------------CTTCTAAGTATTTAGAAACGGCCAATTCAAAAGTGCT-GATAATTTCTAACTTCAGCCTCTGGGATTCCCT-GTTCAGGTTGAGCTGTATAAAGATGCATGTATATTTTT------------------------TTGCCAGCTGCTCTTCAAATGATAAGTGATGCCTTTTAATTACATTTTACATGGTAATTAATTTAAAATACCCATGGAAATTCTTCATCTTGGAATCCCTC--TTCAGGCAG-----------CGCCCAGATGCCCCAGGCTTTC--------AGCACTTTACTCCAGTTTCCAAAATATTCTT-AAAGTACCTAAGGTAATAGAGAGTTTTGAAAATATTCCAAGCAGCT-AGAAAATAAAAACAGCCATTTGCCGAATGAACAATAAAAGAGCAACACATATGTTTACACTTTTGAAATAAAGTAATACTTTTCATTATAAACACATGCAAATAGAACACAAAG-AAATAGTACAATTTTTGAGTTATCTGAATATTTAGCTATTTTAC chr4 + 94230402 44137793 44137792 44138359 44137793 44137792 44138359 567 AAAAAAAGAGAGAGAAAGAAACAAAAAACCCTGAGCAACAAAGAATGAAATAAACTCCACTTTATATCCTGAGCAACAGCCAACTAAATCACCCTTGATTACTCCTGACATCAGCCTCTGGGATTCCCTCTTTCCTCCTGAACTGTGTAC---TGTGAGAGAATTTCCAAAAAAAAAAAAAAAGAAAGAAAATTGCCAACTGCTATTCAAATGATAAGTGGTGCATGCTAATTGCATTTTATATGGTGATTAATTAAAAATAACCATGCAAATGTCTAATTTAAGAGTCACTCAATTCAGTAAGTCTTCCAACTCTGCCTAGCTGCCCTAGGCATTTGGTGGTTAGGCAATTTATTCAAGCTTTCAAAATGTTCTCAAAAATGTCTAAGATAATGAAGGTTCTTGAAAAAGTTCCAGCTAGCTCAGAATGTATAAACAGAGGTTT-----CAGAACTGTAAAATAGCACTGCATATATTTGCATTTTTGCGCTAAGGTACTCTTTGT--------ATACATAAGAATAGAACAGGAAGTAAGTAATAGAGATTCTAAATATTCTAAATATTTAGCTGTTTCAC .........:.:::.:.:...:...:..x:-.:.:..x::....:.------------x:.:..x:.x:.x..x...:.....:.x..xx::x..-...x.:.:..:..x...................-x...xxx:...:....:..x---..::x.x:x....::------------------------......:.....x...............:...x.x:.....:.......:.....:.......x......x.....x....x::.x..:.x:..:..x...--.....xx..-----------:...:..x.....:....x..:--------:...x....:..x..:..:......:....:-...:.::.....:....::..:x.:.......x:.....:x:....-....x:..x......xx:...-----xx....x:.....x....x::.....:...:..:.....x:x...:...x.x:..x.--------.:....:x:.........x:...-..:..:..x.:x..:.:.:.xx...:...........:...:.. 30M1I15M12I37M1I33M1I20M3D15M24I101M2I9M11I22M8I31M1I46M1I21M5D57M8D23M1I44M 355/504 70.4% 567/94230402 0.0% 79/504 15.7% 127511430 62703125 +3682 chr4 + 190214555 171657217 171657216 171657313 97 TATATGCGTATATATGTATATATGTATATATGTATACGTATATATGCGTATATATGTATATATGTATATATGTATACGTATATATACACATATATGT chr4 + 94230402 74437250 74437249 74437345 74437250 74437249 74437345 96 TAAATGCAAACTTATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGT-TGTACTTGTATGCATCTAGATATGGACCTAGATGT ..x....:x.:x...x..........:....:.::....x:..x..:......:..:..:.-....:x.:.:.::.:x..x....:x..x..x.... 61M1D35M 66/96 68.8% 96/94230402 0.0% 1/96 1.0% 97219967 92994588 +3168 chr4 + 190214555 171657226 171657225 171657302 77 ATATATGTATATATGTATATATGTATACGTATATATGCGTATATATGTATATATGTATATATGTATACGTATATATA chr4 + 94230402 85834538 85834537 85834614 85834538 85834537 85834614 77 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x.:...x.:.:...:.:.:...:..:xx..:..x..:..:.......x...::.:.x....:.:..:..:.:.:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 85822688 NA +3550 chr4 + 190214555 171657250 171657249 171657362 113 ATACGTATATATGCGTATATATGTATATAT--------GTATATATGTATACGTATATATACACATATATGTATA--TATGTATATATGTATATGTATATATACACATATGTATATATACACA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.x.x..x...x....:....:.:.x.--------....x...:.:...x:.:......x.:.:..:x....--......:x:...:x.x...:.....::::..:x:...::..:.... 30M8I37M2I46M 76/113 67.3% 123/94230402 0.0% 10/113 8.8% 150548071 39666484 +3133 chr4 + 190214555 171657303 171657302 171657378 76 CACATATAT-GTATATATGTATATATGTATATGTATATATACACATATGTATATATACACATATACATGTATATATA chr4 + 94230402 46063289 46063288 46063365 46063289 46063288 46063365 77 CACATTTACCATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA .....x..:-:..:..:....:..:.....:x.:.:..:.x..::.....x........:....:xxx:......:. 9M1I67M 53/76 69.7% 77/94230402 0.0% 1/76 1.3% 125594014 64620541 +3239 chr4 + 190214555 171657308 171657307 171657385 78 ATATGTATATATGTATATATGTATATGTATATATACACATATGTATATATACACATATACATGTATATATACACATAT chr4 + 94230402 85834538 85834537 85834615 85834538 85834537 85834615 78 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..x...:.x.:...:.:.:...:.:.:.xx..:..x:....::...:..x.:....:.x:...:.:.:.......:.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 85822770 NA +3044 chr4 + 190214555 171657334 171657333 171657397 64 GTATATATACACATATGTATATATACACATATACATGTATATATACACATATATGTATATATGT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT .........::...:...x....:.x:...x:........:.:..:x::.:.x.:.....x... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 94947743 NA +3112 chr4 + 190214555 171657369 171657368 171657436 68 TGTATATATACACATATATGTATATATGTATATATACGTATATATGTATATATGTA----TATATACGTATA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA .:....x.:.........x..x.....xx:...:.:.....:...::...:.....----.....x.:.:.. 56M4I12M 51/68 75.0% 72/94230402 0.0% 4/68 5.9% 129908273 60306282 +3799 chr4 + 190214555 171657428 171657427 171657550 123 ATACGTATATATGTATATATGTATATATACGTATATATGTATATATGTATACATACACATACACGTATATATGTATATACGTATACATACACATATACACATATATATGTATATACGTATACA chr4 + 94230402 21109179 21109178 21109301 21109179 21109178 21109301 123 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...x.x.x..x..:x....::.:.:.:.x:x.:.:x::....x...:.:...x:...:....x...:..:x.:..::..:...:x...:.x:x.:.::.:..:.:....x....:.:.::... 123M 73/123 59.3% 123/94230402 0.0% 0/123 0.0% 150548249 39666306 +3096 chr4 + 190214555 171657446 171657445 171657506 61 ATGTATATATACGTATATATGTATATATGTATACATACACATACACGTATATATGTATATA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ...x......x:...............:.:.:::.:...x.:..x.:.:....x...:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 110386671 79827884 +3101 chr4 + 190214555 171657768 171657767 171657840 73 AAATACATATATACACATATATACACATACATACATACGTATATACATATGTACACATACATACATATGTATA chr4 + 94230402 22600196 22600195 22600268 22600196 22600195 22600268 73 AGACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:...:....x.....::.x......:......x.x:...:..:..x...:::::..:..:...:::::.. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 149057572 41156983 +3059 chr4 + 190214555 171657775 171657774 171657869 95 TATATACACATATATACACATACATACATACGTATATACATATGTACACATACATACATATGTATATACGTGTGTACATACATACGTATGTATAT chr4 + 94230402 29286186 29286185 29286279 29286186 29286185 29286279 94 TATAT-CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT .....-..:...:......::.x.x:....:::.x...x.x.x:....xx:x..:.x....:..:...:x...:.x:..x:........x...:. 5M1D89M 62/94 66.0% 94/94230402 0.0% 1/94 1.1% 142371589 47842966 +3183 chr4 + 190214555 171657985 171657984 171658044 60 GTGTGTATATACATATGTATGCATACATACGTATGTATATATGTATGTATATGCATATGT chr4 + 94230402 74593218 74593217 74593277 74593218 74593217 74593277 60 GTATGCATATGCATAAACATGCATAGATAGATATGTATATATCAATTTATATGCATTTAT ..:..:....:....x::.......x...x:...........xx..x.........x.:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 97064767 93149788 +3096 chr4 + 190214555 171675630 171675629 171675699 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 95642433 NA +10933 chr4 + 190214555 171731439 171731438 171731845 407 AAACAAAAATCAATTTTCATTTG-CAGC--------AGGAGCTACATCTTATTTTACAGAACAAACACACATTCAGTGTGAATA-AGTAGTAGTAAAAATGAGCCTGGTATCTGGAAATTACTACTTAGCTTACTGCTCTTTTATGTGTGTATTTTTTTCCTGACTGAGAACATAGTTTAATTGCTCTATAAAATTTAGAGGGTTC------AAAAAATTGCAATAAAATTAAATGAGAT---AAAAATGTATGCTAACTAAAGTGCCATTGCATTGCACTATATTTTTGTTTTGCTTTATATTTAGAGAGGTGAAATAAAAGGGTCAGACCCATTAAAGTTTTATAGCAACTCAAATCCAAGTTGACACAGTGTTTTTTTATAAGTTTTAAAAATTCCCT-AGACTCAGTAAAATG-TGAATCAAAT chr4 + 94230402 44152486 44152485 44152896 44152486 44152485 44152896 411 AAAAAAAAACCAAATGTCATTTTTCAGCCTCTTAAAAGAATCTGTAACTTATTT-ACAAAGCAAATACTTGTTCC-TGTAATGATAGAGGAAATTAAAATGGAGCTTTTCTCTAGAAATCGCTGCTCAGCTTATTGCTATTTTATGAGCATTTCTTCCCCATGACTGAGAATGTACTTTAATTGTTCAATAAACTCCA-AGGCTTCAAGACAAAAAATCTGCAGTAAAATCAAATGAGATTTAAAAAATGTATGCTAAACAATGTGTCAGTTCATTACACCA-------GTTCTG-GTGATTTTGAGAGCTGAGAATTTAGAGGGTCAGGTTGATTAAAACTATATTG-ATGTCAGAT-GAAGATGAAGCAGCATTTTTTTCCACAT----ACAGTGCACTCAAATTCAGCAAAACACTGAAACAAAT ...x.....:...x.x......x-....--------..:.x..::.x.......-...:.:....:..x::...x-...:.xx.-..x:.x.:.x......::x..xx.x...:.....::..:..:......:....x.......x.::.x.:..:::.x..........::..x........:..x.....x.::.-...x...------.....x:....:......:.........---...............x:..x...:..x.x....:...:.-------...:..-x.x..x..x....xx.x...x.x.:........:::x......::.x...x.-.xx...:..-x...x...x:...::.......x:.x:.----.x.:.x.x..-.:.:....:....::-....x..... 23M1I4M8I18M1D20M1D8M1I113M1D7M6I28M3I39M7D6M1D52M1D9M1D28M4D10M1I15M1I10M 280/390 71.8% 411/94230402 0.0% 38/390 9.7% 127578953 62635602 +5492 chr4 + 190214555 171776795 171776794 171776905 111 GGGAATAGTTATTAAGATAAAATATTAATGGAAATGACCTCAATCAATAAGATGTTATGAATTT-TTTCAGAAACCCAACTTGCCTTTATCAGCTTCACATTATAGATGCTC chr4 + 94230402 44174313 44174312 44174424 44174313 44174312 44174424 112 GGGCATGGTTACTAAGACACAATATTAATGGAAATGACTTCTGTCAGTAAGATGGACTAAGCTTGCTTCTGAAGCCTATCTGGTCTTTGCCAGTTTTATATTTCAGATGCTC ...x..:....:.....:.x..................:..x:...:.......xxx.:.::..-:...x...:..:.x..x.:....::...:..:.:...x:........ 64M1I47M 82/111 73.9% 112/94230402 0.0% 1/111 0.9% 127602482 62612073 +3224 chr4 + 190214555 171782180 171782179 171782242 63 TCTGACTTTTTTTTTCTTTTTTCCATTTCTTTTTTCTTTTCTTTTCTTTTTTTTCTTTTTTTT chr4 + 94230402 59557945 59557944 59558007 59557945 59557944 59558007 63 TTTGATGTGTTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT .:...:x.x...:.:x...::...x:.:.:.....:..........:x............x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 112224235 77990320 +3496 chr4 + 190214555 171785516 171785515 171785616 101 TGCAAGTTCTCAAGATTTATATAGATGCTGCTTTCAATTCAAGAGAAAATGTAAAGATCATGCCTTTGGCTCCACCATGGAGCTGAGACAAGTAACTGCAA chr4 + 94230402 44180552 44180551 44180650 44180552 44180551 44180650 99 TGAATGCTCTCATG-CTTACAT-GTTTCTGGTTCTCTCTCAGCAGTAAGGGTAAAGCTCATGCTTTTGGCTCCACCGTGGAGCTACCAATTGTAACTGCAA ..x.x.:.....x.-:...:..-.x.x...x..::xx:...:x..x..:x......x......:............:.......:xx.xxx.......... 14M1D7M1D78M 71/99 71.7% 99/94230402 0.0% 2/99 2.0% 127604964 62609591 +3269 chr4 + 190214555 171791305 171791304 171791367 63 TGCTTCTCTGGAGACATCTTAGGGTGTGTGATTGTTATTCATGGAAACTGTCAGTTTTCTTAA chr4 + 94230402 44183980 44183979 44184041 44183980 44183979 44184041 62 TGCCTCTTTGCA-AGATATGAGTATGTGTCATTGTTATTCATGGAAACTGTCAGGCTTTTTAA ...:...:..x.-.x..x.x..x:.....x........................x:..:.... 12M1D50M 50/62 80.6% 62/94230402 0.0% 1/62 1.6% 127607325 62607230 +6493 chr4 + 190214555 171792041 171792040 171792247 207 CCCTTTTTCATCAATAAAA---GGCCCTTTTCTGGAGACATCATTGGATGTGTGATTGTTATTCATGGAAACTGTCAGTTTTCTTAAGTCCACCCTGTAACAGGATACATGAGTGACAGACAGTGGACCATTATCTTGACAAGGTAGATCTTTGCTAGCAAAAAGTCAAGGTAAAAGTAAACCTAAAATAAGAGAGTAAGATTATTATTT chr4 + 94230402 44183957 44183956 44184158 44183957 44183956 44184158 202 CCTCTTTTTATCGACAGAATTTGTGCCTCTTTGCAAGATATGA--GTATGTGTCATTGTTATTCATGGAAACTGTCAGGCTTTTTAACTCCTTTGAGAAACATGAAGGGTGAATGACAGATGG-GAACTGTAATCTTGGCAAGGAAGTTCTCTTCTAGGAGAATGCCACTGTATGAG---ACCTGAAAGAAAGAA--AAGATGATAATTT ..::....:...:.:.:..---.xx...:..:xx:...:..x.--.x......x........................x:..:....x...x::xx.x....x..x:x:...:.......::.-.:..::.x......:.....x..x...:.x....x.:..x.:..xx...x:..---....:...x..:::.--.....x..x.... 19M3I21M2D78M1D53M3D15M2D13M 140/199 70.4% 202/94230402 0.0% 11/199 5.5% 127608084 62606471 +3493 chr4 + 190214555 171809009 171809008 171809061 53 TAAATAAATGGGAAAAGAAAATATTACAATAAGATATAGTATACTGGTAGAGG chr4 + 94230402 41630985 41630984 41631037 41630985 41630984 41631037 53 TAAAAAAATGGAAAAAGAAAATACGACAATAACATGTAGTATACTGGTTTAGG ....x......:...........:x.......x..:............xx... 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 130178024 60036531 +9358 chr4 + 190214555 171814575 171814574 171814765 191 TTTGCAATGAAGAGGAAACAGAAGAGATTTCTGCAGATGACTTTGTTGTTCACGGTGGCTTTAATTTTCCTGCCTAACGTTGGTCTCTGGTCTCTGTACAAGGATAAGCACCTGGTGAAGTCAGCGGAGCCCGGGGAGCAGCAGGTAAGTGCCACCCAGAGAAAGATCACACAAGGATTGGTAAGGCAGTG chr4 + 94230402 44193882 44193881 44194069 44193882 44193881 44194069 188 TTGGCCATGAAGAGGAAACAGAAGAGGTTTCTGCAAATGACGCTGCTCTTCACCGCGGCGCTGATTTTCTTGCCCGACATCGGCCTCTGGTCTCTCTACAGGGAGAAGCACCTGGTGAAGCCGGCCGAGCCCGCTGAGCCTCAGGTA---GCCGCGCCGGGCGGGAGCTCTCCGGGCTGAGCGGGTCGGTG ..x..x....................:........:.....x:..:.x.....x.:...x:.:......:....::..:.:..:...........x....:...x...............:.:..x.......xx....xx......---...:.x.x.:.x::..x.x.x.x:..x.x:.:::.x.:... 147M3D41M 139/188 73.9% 188/94230402 0.0% 3/188 1.6% 127620693 62593862 +3120 chr4 + 190214555 171823550 171823549 171823619 70 ACTGTGAATATATATATATGTATATATATATACACACACACATATATATATATATTATAGATGTCTTAGC chr4 + 94230402 12852053 12852052 12852122 12852053 12852052 12852122 70 ACTACAAATCTGTAAACGCATATATGTATGCACACTCACACACATATATATTTATTGGGGATACCATGGC ...:::...x.:..x.::::.....:...::....x......:........x....:x:...::.x.:.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 158971497 31243058 +14889 chr4 + 190214555 171851226 171851225 171851551 326 TTTAAGCTGTCTACAAACTTAGCTCATCACTGGATTCTGGCTTGGAA---TTGTTGTCACTTCTTATTGTTTTCTCTTTTGGTAGAATCAGTCAAAAGAATATCATCCCAGTAGAAAGATGTGACCAATTGCTTTAAAA--AAATTATATTTTGACTGAATCAAGAAAG-TAGAAGGTTCATTTAAACTC-TGTAGAAGAACCCTCATCAGTCTCTCCATATTGCTTTTGACAATGCCTGAGAGACTGTTATATATTATGTTTATTTTTAGAGTCAACCAATCTCTTTTAACTTAGACTGCAGGATGAAAAAAGCAATAACACTCTCAGATAG chr4 + 94230402 44213118 44213117 44213443 44213118 44213117 44213443 326 TTTCAGCTGACTTCAAATTTTGTTCATTACTGACTCCTGTCTTGGGAATATTATTATTATTCCTTATTGTTCTGCACTTCGGCAAAATCAGTCAAGAGGCCATCATTCTAGCAGAAAGCTGTGACCGATTGCTTTAAAAATAAATGATACTTGCACTGACACAACAGAGAGAAAAGGTTCATTAAAACTCATGTTGGAGAACTCTCATCGCTCTTTTTCCATTGCATTTGACACTGCCTGAGAGACTG-------TTATGTTTATTTTTAGAGACTATTGTTCTTTTTAAACCTGCTCTGCAATGTGAGGAAAGCAATAATGCTTTCAAGCAG ...x.....x..x....:..x.:....:....:x.:...x.....:.---..:..:.:.:.:.........:.x:x:..:..:.:..........:..:x:.....:.:..:......x.......:............--....x...:..xx.....xx...x.:..-x.:..........x......-...x.:.....:......:x...:.::x:.....x.......x..............-------..................x.x.:::x...:...x...:.:xx.....:x:...::..........::..:...:::.. 47M3I89M2I28M1I20M1I57M7D78M 239/319 74.9% 326/94230402 0.0% 14/319 4.4% 127638108 62576447 +3201 chr4 + 190214555 171853482 171853481 171853531 50 CTTTCTTACATTTTTTTTTGTTTTCTTCTTTTCCTTTTCCTTTATCTTGC chr4 + 94230402 87452574 87452573 87452623 87452574 87452573 87452623 50 CCTTCTTGAATGTTTGTATGTTTTCTTTTTTTCTTTTTCCTTCATCTTGC .:.....:x..x...x.x.........:.....:........:....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 84400908 NA +3273 chr4 + 190214555 171867890 171867889 171867949 60 CTTTCATTTCAGGGTCTTCATTTTTGCTCTTCCTGTACCTTTCTTTTTCTCTTTGTTTAA chr4 + 94230402 52573386 52573385 52573445 52573386 52573385 52573445 60 CTCTTACTTCAAGGTCTTCAATTTCACTCTTCCTGCTCTGTTTTCCTCCTCTTTCTTTAA ..:.:.:....:........x...::.........:x.:x..:.::.:......x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 119294504 70920051 +16969 chr4 + 190214555 171894083 171894082 171894487 405 GCTATTCTCTCTTGGGTAAAATAATCGGATGTAGTATTAAGACTGTCACTAAGAATTGTTCATGTATAATTTATACTCACAATTAAAAAGCATTTTTAACCAAGTGTCACAACACAGTGACAACTAAATTAGACTGTGATTTACATTACCATGTGCTGC-ACTTGATTTAGTGTCACTCTAGAGAAATTGACAAACAACCCATGTAGAGCAAGGCAGAGGTCTTAGTCAAGATAGGGCTCACTCCCCAGGTGGGAATAAGG-TGAGGGATAGCCAGTGCATGTTGATGCCATTATGATTAATAATTAATATTAG------AATATGTACAGCAATAGAAGTGCAGCCCTTT-TAGTAATTGCACAAGACTACTCTAGATAGGCATAGTAAGTAGTTAATTC----TTTTTACAATATA chr4 + 94230402 44229606 44229605 44230020 44229606 44229605 44230020 415 GCTCCTTTCTCCAGGGTGAAATAATCTGATGTAGTATTGAAGCTGCCACTAAGAATTGTTAATGTATAATTTATCTTTGCAATTAAAAAGCATTTTTAACCAAGTGTCACAACACAATGACAAGTAAATTAGGCTGTGATTTACATTACAGTGCTTTGCAACTTGATTTAGTGTTGCTGTGGAGGAAGTGACAAACAGCCCCAGTGGAGTAAGACAGTGCTTTCAGTAAAGAATAAATTCATTTCCCATGTGTTGGCAGGATTGAAAGATAGTTGCTGTGTGGTACTGAAACAATGATTCATATTTTTTGTTTGTTTCCTAAAATGTAAAGCAATGGAAAAGCAAAACTTTCTAGACAT--AAAAAGAATATTCAGGTCAAACGGAGTGA-TGGATAACTCAGTGTTATTATAAAATA ...x:.:....:x....:........x...........:.::...:..............x.............x:.::.....................................:......x........:................x:..:x:...-..............::..x.:...:..x.........:...xx..:...:...:...x.x.:.:...x....xx::::...:.:....x...xx:::.:.:-...::.....:::x..::..x.:x..xx.:x......x...x..xx.:..x.------..x.....x......:...:x...:xx....-...xx..--x.x....x..:..x:.x:.::.:x...:.-.:.x...:..----..x...:..x... 159M1I101M1I52M6I31M1I7M2D29M1D10M4I13M 295/402 73.4% 415/94230402 0.0% 16/402 4.0% 127664477 62550078 +3100 chr4 + 190214555 171909136 171909135 171909205 70 AAGTATAATAATAAATAAATAAATAAATAAAAAGAAAAAAGAAAAAAAAAAAAGAAAATG----AGGTGAAAGC chr4 + 94230402 17720442 17720441 17720515 17720442 17720441 17720515 74 AAGTAAAAGAATACGTAAATAAATAGGGAAATAAAAAAAAGAAAGAGATAAAAGCAAGTATGTCAAGTAAAGGC .....x..x....x:..........::x...x.:..........:.:.x.....x..:.:----.:..:..:.. 60M4I10M 52/70 74.3% 74/94230402 0.0% 4/70 5.7% 154188694 36025861 +3026 chr4 + 190214555 171909156 171909155 171909212 57 AAATAAATAAAAAGAAAAAAGAAAAAAAAAAAAGAAAATGAGGTGAAAGCTAAGGAC chr4 + 94230402 92119547 92119546 92119603 92119547 92119546 92119603 57 AAGTGAAAAAAAAAAAAAAAAGAAATAAAGAAAGGCATTGAGGAGAAAGCCATGGAC ..:.:..x.....:......::...x...:....:x.x.....x......:.x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 79789609 NA +3134 chr4 + 190214555 171950834 171950833 171950972 139 GATTACCTATGTTATTATTTCTAAGACGCACATTAAATTATGGAATGGGTGTACAGAATTTAAAACTGATAGAGAGAATGAAATGTAAAAAAGGAAGAAAAATATAAAATACATCAAGAAAAAAGAAACAGAGAAGTAA chr4 + 94230402 27189961 27189960 27190072 27189961 27189960 27190072 112 GACCACCTATGTTATCAGTCTT--------------------------GTTTATGGCATCAAAAAAT-ATGGAAAATACAGAAAAAAAAAAACAGAAAAAAATGGAAAATACATCAAAAATATGGAAATACAGAAATAA ..::...........:.x.::.--------------------------..x..::.x..:x....x.-..:..:.:x.:::..x:x......x::.:......:x............:..x.x:....:.x....:... 22M26D19M1D71M 76/112 67.9% 112/94230402 0.0% 27/112 24.1% 144760873 45453682 +7409 chr4 + 190214555 171974326 171974325 171974604 279 ATGAAATCAGGCCCACCATAGCAGCTGAAGTCGACCATTTATTAC-ATGCACTTCATTTGAGTC--TTATTAATGCTGACATCTGTTCAAGTCTTCATTACCATATTACCACAACTGGTCCCTTGTCACATTTATCCTGATTC-TTTGTAGCATAAACACAAAAGAGAAAAATACATTTCCAACTAATGATAAGGTTATTTATAAATGAGATATATTCAAAGAATGATTTTCCACATATTGGACACATGCTATTCATTTCTCAATTTT-----ATTTTTACCTTTAGA chr4 + 94230402 44261856 44261855 44262140 44261856 44261855 44262140 285 ATGATGCCTGGCATGCCAGCACAGCTAAAATAGTACATTTATCTCTCTACACCTCATTTGAGTCCCTTACTAATGCTGACATCTGTTCAAATCTTAATTACCACATTACCTCAAATAGTCCCATGTCAAATCTAACCTCATTTAAAAATATCTCAAAAACAGAAGTGCAAAAT--GTCTCTATGTAATACAGTGATATTTTATTAATAAAGTAAATGGATA-AATAATTTGCATAATATTAAAAGCTTGAAGCTTTTTATTCATCTTCTGGAGATTTTTGACATTAAA ....x::.x...x::...xx:.....:..:.x.xx.......:x.-x.:...:...........--...:....................:....x.......:......x...x.:.....x.....x..:..x...x...:-xxx:..x.x:...x...:...x.x.....--:.:..:.xx....:xx:x.:.xx.....x...:.::..x..xx.x.-...:....x.xxx.....::.x:.x..xx::.:x..x:...x:..:-----......:x.x...:. 45M1I18M2I77M1I29M2D46M1D46M5I15M 186/276 67.4% 285/94230402 0.0% 12/276 4.3% 127712470 62502085 +3407 chr4 + 190214555 171991688 171991687 171991768 81 AGACCAG-AAGTTGAGTTTGATTAT--ATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACATATATATA chr4 + 94230402 68837066 68837065 68837149 68837066 68837065 68837149 84 AGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTA ..:....-..:..:....:x:x..x--.:.....:.............:.:.:.x...:...:...:.:..:....:..x.x.. 7M1I17M2I57M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% 103154622 87059933 +3400 chr4 + 190214555 171991703 171991702 171991778 76 TTTGATTATATGTGTGTGTGTGTGTGTGTATATATATATAT----ATATATATATATACACATATATATACATATATATA chr4 + 94230402 85834531 85834530 85834610 85834531 85834530 85834610 80 TTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACA ...:x.:..x.....x.............:.:...xx..:.----...:....:..x.:....:.x...:..:.:...:. 41M4I35M 56/76 73.7% 80/94230402 0.0% 4/76 5.3% 86157172 NA +3288 chr4 + 190214555 171991708 171991707 171991773 66 TTATATGTGTGTGTGTGTGTGTGTAT----------ATATATATATATATATATATATACACATATATATACATAT chr4 + 94230402 85834540 85834539 85834615 85834540 85834539 85834615 76 TTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:.:.x...................----------...:....:..x...:..:.x..::..:.:...:...:.. 26M10I40M 51/66 77.3% 76/94230402 0.0% 10/66 15.2% 86157168 NA +3375 chr4 + 190214555 171991710 171991709 171991773 64 ATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACATATATATACATAT chr4 + 94230402 70094147 70094146 70094210 70094147 70094146 70094210 64 ATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ..........x...x...x.....:.....:......x.:.xx.x:.:.x........:..:.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 101897563 88316992 +3668 chr4 + 190214555 171991723 171991722 171991820 98 TGTGTGTGTATATATATATATATATATATATATACACATATATATACATATATATATGATTATGTATATTACATATTTGAGCAAAATTTGCTACTATG chr4 + 94230402 40388217 40388216 40388314 40388217 40388216 40388314 98 TGTGTGTATGTGTCTATCTACATGTATGCATATGTGCATACAAATGTGTAACTGTGTAACTATAAAAAAAACACATTTGGGCTAGATTTCATGCTATG .......:.:.:.x...x..:..:...::....:::....:.x..:::..xx.:.:.:.:...:x.x.xx...:.....:..x.:....xx.:..... 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% 131603506 58611049 +3367 chr4 + 190214555 172005596 172005595 172005682 87 CTACATATATGTATGTGTGTGTATATATTTACACACACCTATACCTATGCAATAAT--ATCTTAAAATTCTAAAATAAGGAACATGGTC chr4 + 94230402 37579518 37579517 37579604 37579518 37579517 37579604 87 CCATATATATGTGTGTGTATGTATATAAATGCACACGCATATAGCTGTGCAAATGTTAGTCTTAAACCTTTATA--AAGCAAGATGATC .:.:........:.....:........xx.:.....:.x....x..:.....xx:.--:.......x:.:..x.--...x..x...:.. 56M2I16M2D13M 63/85 74.1% 87/94230402 0.0% 4/85 4.7% 134426078 55788477 +3353 chr4 + 190214555 172006491 172006490 172006594 104 GTGGTGCACACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGTTGGAAGATTGCTTGAACCCTGGATGTTGAGGCTGCAGTGAGCCTTTATTATGCTACCAAACA chr4 + 94230402 76033201 76033200 76033293 76033201 76033200 76033293 93 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---------AACATGATGCCAAGCA .........:--..:...:.........:.::........x::x.x::.x::.........x.:.xx..x:.....:..---------.x:...x.:....:.. 10M2D67M9D16M 65/93 69.9% 93/94230402 0.0% 11/93 11.8% 95973290 NA +11193 chr4 + 190214555 172007484 172007483 172007751 268 CAATATATGAAATCAAGTAACAGCAGCAATTAACAATCACTGCAAATGAATATACAACAATATCGATCATTCAAAAAGTGAAAAAGAAAATTAATTAACAACCTAATTAAAAATCACAGAATGCCCTCAATTATTCTGTTTAAGTAAGATCATCTTTTTAGTTCTCAGTTTAGAATTTGGACTAATTATTCAATT-AAATTTCAGAGAAACATCAACCTTATAAAAACCTCTATTCTGGG-CATTTAAATGTAGATTATTAAATATTCTT chr4 + 94230402 44274716 44274715 44274982 44274716 44274715 44274982 267 CACTGCATGGAATTGACTCATGATGGCAATTAACAAACTGAGCAGCTAAGTGTGCTGC--CATCAATCATCCTAAAGAATTAAAGAAAAATCAATTAACAATTTAATTAAAAGTCATTTGATGACCTCAGTTATTCTGTTTAAATAAGATCATCATTTCACTTCCCAGTTTAGAATTTAGACCAATTATTTAATTAAAATGCCAATGAAAAATTGACA-TAGAGAAACCTTTATTCCAGGTCTTTCAAATATAGATGGTCAAATTATCTT ..x.::...:...::.x.x.:::::...........x.xxx...:x.:.:.:.:.x:.--:...:.....:.x...::xxx...::.....:.........::.........:...:xx:...x.....:.............:..........x...:.x...:.............:...:.......:....-....x:..:x....x..::..x-..x.:......:.....::..-.x..:....:.....x:.:....xx.... 58M2D135M1I22M1D21M1I29M 190/265 71.7% 267/94230402 0.0% 5/265 1.9% 127732768 62481787 +20670 chr4 + 190214555 172035478 172035477 172035918 441 TAAGTAAAACAATACATTTGTGTTTAAAA----CATGCATTTCATG--TGACAATAATTTAAAATCTT-----TGAGACCT--CCTAAAGC--------CAGGAAAAAGGAGAATATGACCCAATGTTAACACTATCAAAGCAAAGTAATACAGTTGATTGAAAATACAGTTGAGCACTCCCAGCAGATGAAGGTGTGAATTTCCTCATACATCATCTTAATGGCAACATTTTCTACAAAGCGACATGGAGCACTCCTTTCATATTTCATGAGTTCTATTTGCCTGACTTCAAAATGCCAAATGTGCCAGTGAACAGTGCTTTAATATTCATGGGTTTTTGAGATGGCTTTGACAGTTGTCAACTAGAGAAATGACTTCATCAGGAAAGAATCTAACTTATGATTTCTGGCACACATATA-----AAATCATGTAGTCATTCGCATATGCATTCTACTTGAAATGTA chr4 + 94230402 44282257 44282256 44282712 44282257 44282256 44282712 456 TAAGTAAAAATATGTACTTATTTTAGATAGGTGCATACATATCAATATTAACGGGAATTTAAAATCTTGATTATGATATTTTTCATAAAGATGTTTCAACCAAAGACAGAAGAATGTCAACCACTAATAATGCTTTTGAAGCAAAATAATAGAG-------AAAATACGGTACAGCACTCCCAGAAGATGAAGGTGTGAGTTTTCCCATACATCATCTTAATGGCAGCGTTTTCCACAAAATGACATGGGGCACTCCTTTCATATTTCATGACTTCTATTTGCCCAGTTTCAAAATGCCAAATGTGCCAGTGAACAGCACTTTAATATTCATGGGTTTCTAGGATGGCTTTGACAGTTGTCAGCTAGAAAAATGGCTTAATCAG----GAATCTAACTTGTGATTTCTTCTTCATACCTAGCCACATACAACGTAGATCTCCATATTCATCTTTCACAGAAAATGTA .........xx..::.:..:.x..x:.x.----...:...x...xx--.:..::x.............-----...x.::.--.x.....x--------.x::.:.x..:.....:.x.x...x.:x...::..x.::.......:.....x..-------.......:..xx...........x..............:...:.:....................:.:.....:.....::.......:......................x...........::::.............................::...................:.::....................:.....:.....:...x.....----...........:........xx:x..:.:x..-----.x.:x.:....x:x.:.::..x:::x..::..xx:....... 29M4I13M2I20M5I8M2I8M8I55M7D223M4D32M5I42M 333/430 77.4% 456/94230402 0.0% 37/430 8.6% 127753221 62461334 +3060 chr4 + 190214555 172042864 172042863 172042913 50 TAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAATTATTGTGATGCATAAA chr4 + 94230402 21465012 21465011 21465061 21465012 21465011 21465061 50 TGAATAAAAAGAAAAAAAAAAAAAGAAAAGCAGTTTCTGTGATGTACAAA .:..x.....:.............:...:.:.:..x:.......:.:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 150577852 39636703 +13795 chr4 + 190214555 172047077 172047076 172047632 556 TTATTGAAACAAACTAACCTGCTGAAAATGAACGTCTGTTTTCCTTTGAAACTTGCGCTCACTTCC----TTTAATTGACC-------CAATTGCTGCCACTTTGGCCTCCGGACGCTCCCCGCAGCTCTGTATTGATTCCCTGG---GAAGGTTGCATTGAGGCAGCGGCTCTCAAACCTAAT---TTTTCCATTCAGTTTTACTTTCTATTAGTTGAAACAGACAACACCAT-CTCCTCACTAAAGATATATGCTACG----GAAGTATAC-AAACAGGTTCTGG-AGCCTAGGGCATTCATTAAAATAGAAATACCGTAAACATTTATTATATCAGAAATGGGAGACTGCACACCACTGACCAAACAACAGATGTGTCAAAATGATGCATTAGTTGAATTTTGCCGTGCTTTCCTCTTCCTTTTCCACCTGAGAA--------------CAAAGCAATGTACCAGTTAGAAAAAGTAAAATAAAATAAAATCAGCGACTGAGTTGCAGAGTAAATGATATCAAAAC-TCTCTGCAGATTTAATAAAAGTAAATTACTAGAGGTCATTACTTTTCATGTTTATTGATTTTTGC chr4 + 94230402 44287841 44287840 44288413 44287841 44287840 44288413 573 TCATTACACTGAGCTTAACCACTGAAA--GAGTGCCTGTCTGCTTCC---ACTTCTACTCACTGCCGCTCCTTAATTGACTGACCCATCAACTGCTGTT-CTTCAATTGCTG--TGTCCCCTGCAGCTCCCTATTGATTTTCTGGCAAAAAAAGTTCTCTGAGACAGCTGTGCTTGAATCTAGGGGGTTTTTCATTGAACTTCACGTTCTGTCAGTTTAAAGAGACAAGTCTGTGCTCTTCTATTGCAATGTGTGTATAGAGGAGAAGTATATTAAATTAATTATGGCAGCCTAGAACACTCTTTGAACTTGAAGTATAGTAAACATTTATCATATCAACAATGGGAAACTGTGCTCCACTGGCTAAATAACAAAGATGTCAAAAAGATGGATTGG-TGGATGTTCACACGTTTTTTTCTTATACTTTAACCTGAAAAGAAACTCCAGACTTCAAAGCA------TAGGTATAGAAAGT-AGCTGAGATAGA------GAGTGAATTGTTGAATCAATTATATGAAAATGTATATATTGATTTCATAAGAATAAACTGTTAGACATCTTTCTTTTTTTCACTTATTGGTTTTAGC .:...:x.x::.:..x.x.::......--..::.:....:.x.:.::---....x::......x..----:.........:-------...:.....::-...:::::x.:.--:.::...:.......:x........::....---:..::x.x.x:....:....x.:x..::..:...:x---....:....x.::..:..x....:.:....x...x......xx.::.-...:..xx.x:x:..:.:..:xxx.----........:-...:x::..x...-.......::..:..x..:..x.x...:..:x............:......:x.......:....::.x......:.:...:....:.x:........x....x...:.-..:..x..xx.::.:...::....x:x:..:x......:..--------------.......------:..x..x.:.....-.:x.:.:...:.------..x...:...:x..:.x...x....x....:-.x.x.::x.....x....:.:....:.::....x:..x..x:....:x:::......:....x.. 27M2D18M3D16M4I11M7I11M1D12M2D31M3I36M3I47M1I25M4I9M1I13M1I108M1D41M14I7M6D14M1D12M6D31M1I65M 359/534 67.2% 573/94230402 0.0% 61/534 11.4% 127759236 62455319 +3554 chr4 + 190214555 172057277 172057276 172057361 85 AGTGGTGCATGCATATACTCCCAGCTACTCGAGAGGCTGAGGTGGAAGGATCACTTGAGCCCAGGAGAGAGAGGTTGCAGAATAT chr4 + 94230402 76033200 76033199 76033282 76033200 76033199 76033282 83 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACAT .........:.--.:..x.:.........:..:........x:xx:x.:.x.......:.....:..xxxx:..:..:....:.. 11M2D72M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 96024077 94190478 +3121 chr4 + 190214555 172057703 172057702 172057756 54 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 82027627 NA +3373 chr4 + 190214555 172057703 172057702 172057759 57 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAA chr4 + 94230402 1495000 1494999 1495056 1495000 1494999 1495056 57 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAA ...x.:.........x.:......x........:.:..:...:.....x....::.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 170562703 19651852 +3507 chr4 + 190214555 172057705 172057704 172057767 63 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAATCAAGTT chr4 + 94230402 1495000 1494999 1495062 1495000 1494999 1495062 63 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCAAGAGGTT ...x.:.........x.:...............:.:..:...:.....x....:x.xx.:... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 170562705 19651850 +3162 chr4 + 190214555 172057707 172057706 172057758 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495051 1495000 1494999 1495051 52 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATA ...x.:.........x.:....x..........:.:..:...:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 170562707 19651848 +3113 chr4 + 190214555 172071445 172071444 172071608 164 TAGCTTGTCTCATGTTCCTTGTACCCTACAATGTCACAAAAAACAAAGCTCAAGATCAAGTATGGCAAATTCCCTTCAGTTGTAAAACCCTTTTGGTGTTCTGCTTTTCTCATTGGGTTCCACATTTAGTGTGTTTTGTTTGTTTGTTTATTTGTTTTTTCCTT chr4 + 94230402 29054548 29054547 29054694 29054548 29054547 29054694 147 TAAGTTGTTTTATTTTCTATATAACCTAGATCG--ATGAAGGAAAAGAATTAAG---------------TTCCCTTCAGTTATTTGATTTTGTTCATCTCCCCCTTTCTTAAGCTAAACTGGTTTTTGGTGTTTTTTGTTTGTTTGTTTGTTTCCTCTATTCTT ..:x....:.:..x...:x.:..x....x.x:.--.::..::.x..::x.:...---------------............:.xx:.:::.x..x:.x.:.:x....::.x.x:x::x::x::x...:....x................:...x:.:.x.:... 33M2D19M15D95M 89/147 60.5% 147/94230402 0.0% 17/147 11.6% 143016897 47197658 +3055 chr4 + 190214555 172118676 172118675 172118750 75 GGAGATAGAGCAAGACTCTGTCTCAAAACAAAAAAGAAAAAAAAAAACCAAAAAACAAACAAACAAAAAACAAAA chr4 + 94230402 73849827 73849826 73849901 73849827 73849826 73849901 75 GAAGACAATCCAAGACCCCCCACAAAGATTAATTTAGAAAAACAACAACAAAAAACAAACAAACAAAAAACAAAA .:...:.:xx......:.:x:x:x..:.:x..xxx::.....x..x.x........................... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 98268849 91945706 +3208 chr4 + 190214555 172118712 172118711 172118747 36 AAAAAAAAAAACCAAAAAACAAACAAACAAAAAACA chr4 + 94230402 72332826 72332825 72332861 72332826 72332825 72332861 36 AAAAAAGAAAACCAAAAAACAAACAAACAAAAAACA ......:............................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 99785886 90428669 +3270 chr4 + 190214555 172118712 172118711 172118768 57 AAAAAAAAAAACCAAAAAACAAACAAACAAAAAACAAAAAGGAATAAAAGAAAAAAA chr4 + 94230402 56761671 56761670 56761727 56761671 56761670 56761727 57 AAAAAAGAAAACATGGAAACAAACAAACAAAAAACCAACCATAATGAAGGAAAAAAA ......:.....xx::...................x..xx:x...:..:........ 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 115357041 74857514 +3246 chr4 + 190214555 172131490 172131489 172131559 70 CATATATATTTTATATATGTGTGCATATATATACACACACACACATATGTGTTTGTGTGTGTATGCTTTT chr4 + 94230402 72946601 72946600 72946670 72946601 72946600 72946670 70 CACATATATTTTGTTAGTGTATTCATGTACATACACACATGCATATATGTATGTTTGGAAGTATTCATTT ..:.........:.xx:...:.x...:..:.........::..:......:.x.x..x:x....x.x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 99184889 91029666 +3201 chr4 + 190214555 172138457 172138456 172138540 84 TATTAATTTAC---TTGGACTGCCTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250975 33250974 33251061 33250975 33250974 33251061 87 TATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .....x.....---x.:.:x.x::.x.x.:.:.:.:.:.:.......:.:........x.x.....x...x.....x..x....... 11M3I73M 60/84 71.4% 87/94230402 0.0% 3/84 3.6% 138887482 51327073 +3112 chr4 + 190214555 172138460 172138459 172138542 83 TAATTTACTTGGACTGCCTATATATATATATATATATATATATATATATAT--ATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823250 7823249 7823334 7823250 7823249 7823334 85 TAGCTCACGTATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..::.:..x.:xx:.:.x..:.........:.:......x.:.:x.x..x.--.x...:...x..:..............x:... 51M2I32M 58/83 69.9% 85/94230402 0.0% 2/83 2.4% 164315210 25899345 +3066 chr4 + 190214555 172138470 172138469 172138531 62 GGACTGCCTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792610 24792609 24792664 24792610 24792609 24792664 55 GAATTACTTATGTA-------AGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT .:.:.:.:...:..-------.x...................x:........x......... 14M7D41M 46/55 83.6% 55/94230402 0.0% 7/55 12.7% 147345860 42868695 +3222 chr4 + 190214555 172138478 172138477 172138544 67 TATATATATATATATATATATATATATATATATATATT----TTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823334 7823264 7823263 7823334 71 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTT ..:...:.........:.:......x.:.:x.x..x..----..:...x..:..............x:... 38M4I29M 52/67 77.6% 71/94230402 0.0% 4/67 6.0% 164315214 25899341 +3510 chr4 + 190214555 172138480 172138479 172138554 75 TATATATATATATATATATATATATATATATATATTTT---TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGC chr4 + 94230402 7823264 7823263 7823341 7823264 7823263 7823341 78 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACTTTGAAGTGC ..:...:.........:.:......x.:.:x.x..:..---x..:...x..:..............x:.....:::.. 38M3I37M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% 164315216 25899339 +3009 chr4 + 190214555 172138482 172138481 172138547 66 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 7823264 7823263 7823329 7823264 7823263 7823329 66 TACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTT ..:...:.........:.:......x.:.:x.xx.:..xxxx..:...x..:.............. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 164315218 25899337 +8816 chr4 + 190214555 172157885 172157884 172158192 308 TTCTCCTCAGGTACATTAAATTAATTGAGCATATTGTGGCCTCTGCAGCATGATGTTTTGCTAGTAAATGATTCATGTTGCGTCCCAACCACAGTGAACAGCAAACTTTCACCAGAAACAGATGGAGGAATGATCTTGGCCATTTGTGGCAACCTCAGGTTCATCTAGGAAAAACTGAAGTTCATTTAAAATTGACCTCAATATGCTGTTGGCCAGATTTGATTCACCTCAGGT---GCATGGTTCT--------ACTGAGAAAGTAATCAGCACCAGCAGATGGCCCTCTCTAGGC-TCACTTTCCTAGGCAATTAAAA chr4 + 94230402 44324133 44324132 44324413 44324133 44324132 44324413 281 TTGTTTTCAGGTACGTTAATTTAATTGCACACATTATGGCCCTAGCAGAGTGATGTTTTTCTTGTAAATGATTCGTGTAGAGTCTAGAAGCCAGTTCACTGCGTGGTTTCACCAGAGGCAGTCAGA------------------------AAGCTCAGGTTC-----------ACCACAAGTCACAGAAAATTGACCTCCATCTGTTGTTCCCCAGATTTAATTCACCTCAGGCTTAGCATGTTTCTGAGGTTTCATTTAACAAGTAACTTG----AGCAGATGGCCTTCTGTGGATATAGTTTTTGTAGGTATTCCAAA ..x.::........:....x.......x:..:...:.....::x....x:.........x..x...........:...x.x...:x:.xxx....xx..x..:x:x..........::...x::..------------------------..x.........-----------..::x.:x...:xx............x..x..:....xx........:............:---.....x....--------.:.x.:x......::x.----...........:...x.:.::-.x::...:x....:.x.:x... 126M24D12M11D61M3I10M8I17M4D21M1I22M 194/269 72.1% 281/94230402 0.0% 51/269 19.0% 127833752 62380803 +3071 chr4 + 190214555 172174366 172174365 172174406 41 TCTTTTTCTTTTCATTTTTCCCTTTTTTTGTTGTTGTTGTT chr4 + 94230402 82090610 82090609 82090650 82090610 82090609 82090650 41 TCTTTTTCCTTCTATTTTTCCTCTTTTTTGTTGTTGCTGTT ........:..::........::.............:.... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 90083756 NA +3145 chr4 + 190214555 172177722 172177721 172177785 64 TGTGTATATATATATACACATGTGTATATATATGTGTGTATATATATGTACACATATATACACA chr4 + 94230402 56867300 56867299 56867363 56867300 56867299 56867363 64 TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .....:.:x...:........:.::.:xx....:.x...::..:...:....x:...:...... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 115310422 74904133 +3055 chr4 + 190214555 172177724 172177723 172177785 62 TGTATATATATATACACATGTGTATATATATGTGTGTATATATATGTACACATATATACACA chr4 + 94230402 47135177 47135176 47135238 47135177 47135176 47135238 62 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACA ...:.....::.........x:.xx:.x.....:::.:...:.:........:.:.::.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 125042547 65172008 +4403 chr4 + 190214555 172177736 172177735 172177834 99 TACACATGTGTATATATATGTGTGTATATATATGTACACATATATACACATGTGTATATATATACACACACA----------TATATGTGTGTGTATATATACACACAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:........:.x.x.:..x.:....x.........x..:......x.:...::x....::..:::..x..----------.........:..x....::.::..... 72M10I27M 72/99 72.7% 109/94230402 0.0% 10/99 10.1% 151068542 39146013 +3201 chr4 + 190214555 172193452 172193451 172193509 58 AAAAGAAAAACAAACCAAAAGCAACAACAACAACAACAACATCAACAAAAAATACCCC chr4 + 94230402 42575020 42575019 42575077 42575020 42575019 42575077 58 AAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCC ....x.....x......xx.x..x..x..x...........x..........x:.... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 129618432 60596123 +3891 chr4 + 190214555 172199739 172199738 172199818 80 GATTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTGCTTGTTTTAAATAGTGGGAAAGTCCTAAGGCATTCAAAA chr4 + 94230402 74136538 74136537 74136615 74136538 74136537 74136615 78 GGTTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCA--GGTGCCAAAATATCCAAGCATTCAAAA .:............:........x.x..x....:...:...:.......x.--:...xx...:.x::x.:.......... 51M2D27M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% 98063201 92151354 +8361 chr4 + 190214555 172229647 172229646 172229793 147 TTTCCACAGACATTTCCACTGGGCCTGGGAGATGGGCAATTCTATTCATGGACAGATGGTTTGAGAAGAAAGGACTGGCATGACTATGAAAGCATTCAGAAAGAGGCTATGCGCTCAGGTATG---AAGCTCAGTGTACGCCAAAGTGCT chr4 + 94230402 44342650 44342649 44342799 44342650 44342649 44342799 150 TTTTCACAGACAATTCCATTGGGGCTGGGAGATGGACAGTTGTTCACCTGGACTGATGGACTGAAAAGGAAGGATTGGCACAATTATGAAAGTATTCAAAAAGATGCTATGCGTTCAGGTATGCCTAAGTTCAGAGCAAGTTTAAGTGTT ...:........x.....:....x...........:..:..x.x:x.x.....x.....x:...:...:.....:.....::.:........:.....:.....x........:.........---...:....x.:.x.::x.....:. 123M3I24M 115/147 78.2% 150/94230402 0.0% 3/147 2.0% 127886997 62327558 +3211 chr4 + 190214555 172236420 172236419 172236502 83 CATGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCAGGGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:...........::........x.xx.x...xx:.x.......:.:..x:xx..x:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 96203223 94011332 +3857 chr4 + 190214555 172264477 172264476 172264681 205 TATATATATATTTATACTTATATT-TATATATTTATATA-TTATATTTATATTTAAATAAGGTTGGCATAATATATGCCAAATATATATATATATATATATATATATATATATATATATTTGGCATATATATACACATATAATATATTTGGCATATATTATATGTGTATATACGTATAAGTGTGTATGTATGTATGTGTATATATAT chr4 + 94230402 13482400 13482399 13482594 13482400 13482399 13482594 195 TACGTACATAGGTATACATAGATAATACACATGGATAGAGTTAGGTTTTTGTCTCA-TAGAGATCTCATCCTACGTATCTTTTACATACGTATCTACACACAGCTCTTTACAT-------TGGTACACATATACG----TGATGGATTGGGAATGCTATGTGTGTGTATGTATGTATAGTTGCGTATGTATGCATAGCTATACACAT ..::..:...xx.....x..x..x-..:.:..xx...x.-...x:...x.:.:.x.-..::.x.xx...xx..::.::.xxx..:...::...x..:.:.:.xx.x.x..:..-------...:.:.:......:----.:..:x...x..x..::xx.:.:.......:..:.....:x..:.........:..:xx....:.:.. 24M1I14M1I16M1D56M7D15M4D68M 122/193 63.2% 195/94230402 0.0% 14/193 7.3% 158782077 31432478 +3188 chr4 + 190214555 172295497 172295496 172295557 61 GGTTGCACTGTTTTTTCTTCTTTTCTTTTTTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 + 94230402 86518989 86518988 86519049 86518989 86518988 86519049 61 GACTGTAGTTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTG .::..:.x.x.:..::..:.:.:....x...:..x.....:...........:.....:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 85776508 NA +10166 chr4 + 190214555 172311592 172311591 172311759 168 TCATTTTGTTTTCTCCTGCTAGGGAAAGGTGAACATGGGAAACCTTACCCCCTTACTGAAGAGGACCATGATGACTCAGCTTACAGGGAAAATGGTTTTAATATTTTCGTCAGCAACAATATTGCTCTAGAGAGGTCTCTGCCAGATATTCGTCATGCTAAGTGAGTA chr4 + 94230402 44363716 44363715 44363880 44363716 44363715 44363880 165 TTATTTTGTTT---CATTGTAGGGAAAGGTGAACATGGAAAGCCCTACCCTCTGACAGAGGAAGACCATGATGATTCAGCTTATAGAGAAAATGGCTTCAACATATTTGTTAGCAACAATATAGCACTGGAGCGGTCTCTGCCAGACATCCGACATCCTAAGTATGTA .:.........---.x.xx...................:..:..:.....:..x..x..:..:...........:........:..:........:..:..:..x..:..:...........x..x..:...x.............:..:..x...x......:x... 11M3D154M 134/165 81.2% 165/94230402 0.0% 3/165 1.8% 127947876 62266679 +3403 chr4 + 190214555 172318695 172318694 172318757 63 TCCATCCCCCCCACCCCCCAAAAAAACCAACAACAACAAAAAACAACAAAAAAAGAAAGGCTG chr4 + 94230402 56761797 56761796 56761859 56761797 56761796 56761859 63 TCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAACCCACAAAAAACAAAAAAAAAACATAGACTG ...x:.......x......x......xx..x.x.x...........x.......x.x..:... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% 115556898 74657657 +10792 chr4 + 190214555 172323265 172323264 172323906 642 CCAGACTAATTTTTCAGACCTGTCAAA-AGCAAAATAAATTACTAGATATCACTGCCTTATCAAAGGTAACTGACATGGGCAAGATTAGAATAGAAAAACAGTGTGACTAAAACCAGCCACTGAAAATTGAATACGCTGACAT--TAACACAATTACTATGTAAATTGGTGCTTGGAAATGACTTATACATATATGCTTTATAACATGTTTGTCACTACCCAGGTGCCAAGTTGACATTTTA--TTCTTCTATT-GAGAATGGGAAGAGACAACCTTAAATGAACCAAAATAGTTTTGC-AAGAAATCATGCAGTGACAAAAGGTTGAAAGAAAATAATTTGCTATCTTTCTAAACATGTCAGATCCTTTATATCGATTTTTTAAATAATTGG--------TTTGCTAACTATAATATTATTA------------GCTATTCTGATAATTATTTTTAGGAGATCTGGATTTCACAGA---ATTTAACT--ACCTGAACTGTCATCTATCAGTAAAGCCATGTTACAAGGCTTTTAGTA-GACTAGTAGGCAGTAAATTAACCAATTAATAAATTAGTATGGAGTCTAAGTTGCTGGCACTGTTATTTATAAAGGTGTCTAAAACACCATTTTTGCTCTAGCCATGAGGTCAGAAACAAGTT-CTAGTATTTTGAAT chr4 + 94230402 44371847 44371846 44372485 44371847 44371846 44372485 639 CCAGGCTAATTTTACAGCCTTGTCAAACAGCAGTAGAAATTATCAGTTATCACTACTTTATCAGGTGCAGTTGACA-AGGCTAGATTGGAACAGAAACACAGTGTGACTGAAGCTTGTTGCTGTAAATTGAACACTTTGACATGCTAAGACAATTACTATGTAAATCTTCACTGGAAAAATGTTGTGTCTTGGTAGCTTTGTCATGGGCTTGTCAGCAGCTGAGTGCCCACTGGGTGCTGTAGTTTCTTTTATTAAAGAATAAGAAGAAAAAGTC----------------AGATCTGCTAAGAGAGCATGTACTGACAGCTGGTAGAAGAAAGGTTGCAGGCTGATTCTATTTTGCTGTAACTTACTTTTTTCTGTAACGTGAGAAAATTGGAGGTGGTCTACATTTATGATGAAGTAACTGCTGCAGGAGGCTGCTACCTTGCTTTCTAAATGCAGCAG--TGGGATGTCTGAAAGACATTTAACTTCTCCTATGCTATTATCTTTCAGAAAGGGCAGTTTACAAGGTAGTTGATGTGTCTAGAAAGCACAGAACCTGGTAACT----------------GGCCAAGACATTGTTACTGGCATCCTTTAACGTGCATAAAATATTGCTGTTGTTATATCCACGGGGCC--AAACAAATTGCTGCTTTTATGAAT ....:........x...x.:.......-....:x.x......::..x.......:.:......::x.:.::.....-:...x.....:...:.....x...........:..:.:x.:::...x........:..x:......--...x.................:xx::..x.:...xx::.xxxx.x.:xxx.....:.x.::x.:......x:.x.:::.....x.x.x.::::.x..--.....:....-:.....::.....:.x.::.----------------..x.:...-....:.x....:.x.....:xx...x...::..::.x::xx...:x:.:.x.xxxxx...x.xx.x....x.x::.xxx:x.x.:.x......--------.x:::.x.:x..:.x:.x.:.:------------....:::..x.xx:..xx.x:..x..--:x....x..xx.:.---........--x...:x:..:.:....x....x..:.x..xx........:xx..::.:-.x....x.:...xx:..::x:x:..:.----------------.x.:...x:::..x:....x:..::x.x..x...:x.....:.::::.x...:.x..x...:.:..:.--......:..-..:x.x..x..... 27M1I48M1D66M2I97M2I10M1I20M16D8M1I93M8I22M12I26M2D14M3I8M2I48M1I27M16D68M2D9M1I14M 381/605 63.0% 639/94230402 0.0% 71/605 11.7% 127951418 62263137 +3096 chr4 + 190214555 172341311 172341310 172341380 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 96308114 93906441 +13982 chr4 + 190214555 172348497 172348496 172348719 223 ACCATTTTCTTTTCCCTCATCTCCAGCTGTAAGCATAAGATGTATCTGGAAAGGCTGCCAAACACCAGCATCATTATCCCATTTCATAATGAAGGTTGGACTTCACTCCTGCGGACCATACACAGTATAATTAACCGAACCCCAGGGAGTCTGATAGCAGAAATCATTCTAGTAGATGACTTCAGTGAGAGAGGTAAGATACAGTTGATAACATTTTATCTGA chr4 + 94230402 44379039 44379038 44379256 44379039 44379038 44379256 218 ACTGTTTTCTTCTC-----TCTCTAGCTGTAAGCACAAGGTGTACTTGGAAAAGCTACCAAATACCAGCATAATTATCCCATTTCATAACGAAGGCTGGACTTCCCTCTTGCGAACCATACACAGTATTATCAACCGCACTCCAGACAGCCTCATCGCAGAAATCATTCTTGTGGATGACTTCAGTGACAGAGGTAAGGCCCAACTGGTTTTGTTTTATTTGA ..::.......:..-----....:...........:...:....::......:...:.....:........x.................:.....:........x...:....:..............x..:.....x..:....:x..:..x..x..............x..:..............x.........::x..::..:.xx::......:... 14M5D204M 178/218 81.7% 218/94230402 0.0% 5/218 2.3% 127969458 62245097 +5754 chr4 + 190214555 172348520 172348519 172348701 182 CAGCTGTAAGCATAAGATGTATCTGGAAAGGCTGCCAAACACCAGCATCATTATCCCATTTCATAATGAAGGTTGGACTTCACTCCTGCGGACCATACACAGTATAATTAACCGAACCCCAGGGAGTCTGATAGCAGAAATCATTCTAGTAGATGACTTCAGTGAGAGAGGTAAGATACAGT chr4 + 94230402 44711880 44711879 44712061 44711880 44711879 44712061 182 CAGGTGCAAACACTGGCATTATGATGAAAACCTGCTCACCTCCAGCGTCGTCATTGTCTTCCATAACGAAGGGTGGTCCACGCTGATGAGGACGGTTCACAGCGTCATTAAGAGAACACCAAGGAAATACTTGGCAGAAATTGTGCTGATCGATGACTTCAGCAACAAAGGTATGTTGGAGT ...x..:..:..:x:.xxx...xxx....:x....:x.x.x.....:..:.:..:x:x..:.....:.....x...x.:x.:..xx..x....x:.x.....::.x.....xx....x...:...:x:xxx.:........::.x..::.x...........::.x.:.....x.x.:x... 182M 116/182 63.7% 182/94230402 0.0% 0/182 0.0% 127636640 62577915 +3211 chr4 + 190214555 172384976 172384975 172385030 55 TGTGTGTGTGTGTGTGTGTTTTGTTTCGTTTTTGTTGTTGTTTTGTTTTTTTGTT chr4 + 94230402 62522706 62522705 62522760 62522706 62522705 62522760 55 TGTGGGTGTTTGTGTATGTGTTGGTTTTTTTTTTTTGTTGTTTTGTTTATTTTTT ....x....x.....:...x...x..:x.....x..............x...x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 109862270 80352285 +28328 chr4 + 190214555 172404457 172404456 172405246 790 CTAGAAAATAATTTCGTTCAAAAATAAATTTTTC----ATTTCCTCCTGTTATGTTTTAGCTTCTGATTTCT------ATCATAAGAGCCTTAAATGGTCATGGCTTGAGCTCAATGTAAAATATTCTGAACACAAATCTTGGCTTTCTTCTTTAATTATAAAAAG--TGTGACCATTATGTAGCTGTTCTTGTATATACAGAAATATTCAGTGTTTTAATTAGGCTTACTCTACTTTAGTGTTAAAGGAAGCAACAGGCCTGCGATTGCCTGGGCACTAATAGTACA-TAATATAGCCAATTGCAAACAGCAGTCTAATTTGTTGATTTCAAGTGAAGTGTAATTATATTGCTTCATTTGCTGAGCAAATCATACGAGAGTTTCTCTAAATCAGCCTGATTGTGTAATGAAGAGCTAATTACAAACAGCAGTGTTCTTGCAGTAAATTTATTGTAAGTGCTAATGCCAGGTTGGCTCCATTGTGACAATGGCTCATTAGTACATTAGCAAAAGCAACTGTGGGAAAATGCCC-AAGCAGGGCTACCGGTCTCTCAGTTTCAGAAGCTGCAATGATTACATCCTTCAAC----ATGTAATTACT--AAGAAAATGGTGTTTGATTTAGGTTTT-GGCAAATTTTTAAAAAGAACTAAAAGACATTTTTAGA---------------GCAAAATGAAATGATTCGGAAAGCCTTCTTGTCAGGCTTAATTGGTGCTTCATTTCACCAGGTGTGCCCTGGAAACCGAATTTAACAAGAGGCTCTTTTAGACACTAGGCCATTCTTGACAACT-GAGTTCTCACATTTCC chr4 + 94230402 44405861 44405860 44406643 44405861 44405860 44406643 783 CTACAAAATAAATTGCTACAGAGCAAACATTTTCCCCTACTTCCTCACTTCAATTTTAAGCT---GATTTCTGCTTGTATTATTAGGTGTTATCACCACTGAGACTTAAACTTA---CAGAGAATTTGTGACACAAATTTTAGCTCTTTT---TAATTGCAAAAAAATTTTGATTATTATGTAGCTGATCTTGCAAATTCAAAAATATTCTGTACTTCAATTATGCCTACTTTA----AGTGCTGAAGACCACAACAGGCCTGCAATTGCT--AGTGCTAACAGCACAATAATACAGCCAATTGCAAACAGCAGTCTAATTTGTTGATTTCAAGTGAGGTGTAATTATATTGCTTCATTTGCTGAGCAAATCATATGAGAGCTTCTCTAAATCAGTCTGATTGTGTAATGAAGAGCTAATTACAAACAGCAGTGTTCTTGCAGTAAATTTATGGTAACTGCTAATGCCAGGTTGGCACAAGTGTGACAATGGCTCATTAGTACATTTACAAAAGCAGCAGTGGAACTCTGCCCAAAACATAGCAACTATTCTCTGTTTCCCGAGAGCAG-AGTGATTACCTCTCTCCCCTCCATTGTAATTAGTTAAAAAAACTAAACTAAAATAAAAGTCTTAAGTCACTTCTTGGAAGAAATTGAATAGCATTTCTAGAAAAGCCTACCTTGAGGCCGAATGACATT-TAAAGAAAGCATTCTTTTCACCCTCCAGGGAAAGTTAAATT-------------TTGAAAAC---GTTTGACCAAAAGCCGT-----------GGCTATTAGTGACAACTGGAGGTCCGATATTTCC ...x.......x..xx.x..:.:xx..xx.....----.:......x:x.:.xx...x....---.......------..:..x..:xx:.xxx.:x::::x.:...:.:..:.---:.:.:x...:xx:........:..:...:.:..---.....::.....:--.x...::............x.....:.x..x..:........x..::..:.....x..:....:..----....:.:...:xx:............:.....:--:.::....:..:...-.....:..........................................:.....................................:.....:.............:........................................................x....x..................x.x.x.........................x:........:.x....:.xxx.....-..:..x:..x..::x.....xxx.::.:::...x.-.:.......x..::..xx.----x........x.--..:...x.::xx.xx:..xx.:..:..-:.:x.x..:..::..::..:.:..x::.....:....---------------..x:.....x..x-.xx:......x.....x...xx..:x.xx.:x:x..x.x..-------------:..:....---:...:..x.:.:..:x.-----------...:...xx........-...x..:x.:...... 34M4I24M3D7M6I36M3D33M3D13M2I66M4D33M2D15M1I244M1I35M1D19M4I11M2I27M1I37M15I13M1D41M13D8M3D17M11D17M1I16M 557/746 74.7% 783/94230402 0.0% 81/746 10.9% 127998596 62215959 +3279 chr4 + 190214555 172405389 172405388 172405483 95 CCTACTTATACTTGATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTCTCCTTGCATTGAAGTG chr4 + 94230402 7823253 7823252 7823340 7823253 7823252 7823340 88 CTCACGTATTTTACATACATATATATACACATATATTTGTGAAGATCTTAAGATTCTTTGTTCTTTTTTTTTTTTTTACT-------TTGAAGTG .::..x...x:.xx...:.........:.:......x.:.:x.x..x.xx.x..x:...x..:..............x..-------........ 80M7D8M 64/88 72.7% 88/94230402 0.0% 7/88 8.0% 164582136 25632419 +3017 chr4 + 190214555 172405423 172405422 172405461 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 147612797 42601758 +3233 chr4 + 190214555 172417527 172417526 172417591 65 TAATTCCAGCTACTTGGAAAGCTGAGGCAAGAGAATTGCTTGAACCCAGGAGACAGAGGTTGCAG chr4 + 94230402 76033213 76033212 76033277 76033213 76033212 76033277 65 TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.............:..:......x.xx.x...x::...........:..x:xx:..:..:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 96384314 93830241 +3606 chr4 + 190214555 172467794 172467793 172467915 122 AAGCATTTTACATTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCCTTCTTTCCTTCTTTTCTTTTCTTTCTTTTTTTTTTT--TTTTTACTTGAG chr4 + 94230402 63697114 63697113 63697242 63697114 63697113 63697242 129 AGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAG .::.x..x.x.x.:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.-----....x...:..:x.xx::.....:.:.::......:...:..--......:..:.. 68M5I42M2I12M 79/122 64.8% 129/94230402 0.0% 7/122 5.7% 108770680 81443875 +3000 chr4 + 190214555 172467829 172467828 172467909 81 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTA chr4 + 94230402 53984336 53984335 53984416 53984336 53984335 53984416 81 TCTCTACTCTGTCTCTTCCTCCTTCCTTTGTTGAGATCCTTCCTTCTATCTGTTCTTTAATCTGTTTTTTCTTCTTTTTCA ...:.x:.::x.:::...:.:...:....x..xxxx......:...:x...x......xx.:.x......:..:.....:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 118483493 71731062 +3613 chr4 + 190214555 172478759 172478758 172478883 125 AAAAAAGACTAATATCCAGAACCTATAAGGAACTCAAACAAATCAGCAACAATAACAACAAAAAACAGATAATCTCATTAAAAGTAGGC-AAACATCATGAACAGACAGTTCTCAAAAGAAGATGT chr4 + 94230402 59145991 59145990 59146116 59145991 59145990 59146116 126 AAAAAAGAATTATTCCCAACATTAAAAAACAAAACAAACAAATCAGTAACAACAACAACAACAAACAGAAAAGCTGAAAGGAAGGTGACGGAAGATTATCAGTCTTCAAATTTCAGATGAGAGTGT ........x.x..x:...:x.::x.x..:x..xx............:.....:........x.......x..x..x.xx::...xx.:.-:..x..:..x.::xxx..:x.:...:.x..:::... 89M1I36M 81/125 64.8% 126/94230402 0.0% 1/125 0.8% 113332768 76881787 +3057 chr4 + 190214555 172478789 172478788 172478844 56 AACTCAAACAAATCAGCAACAATAACAACAAAAAACAGATAATCTCATTAAAAGTA chr4 + 94230402 23780804 23780803 23780859 23780804 23780803 23780859 56 AGTTCAAACAAATAAACAACAACAACAACAAAAACCAAATAATTTTTTTTTCAGTA .::..........x.:......:...........x..:.....:.:x..xxx.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 148697985 41516570 +4091 chr4 + 190214555 172487183 172487182 172487422 240 AAATCTTCATTTTCTTTCTTTCTTTCTT-----TCTCCTTCCTTCCTTCCTTCCTTCCTGTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTCTTGTCTCACTCTG chr4 + 94230402 19215329 19215328 19215567 19215329 19215328 19215567 239 AAATTTTTATTTTATTTTCTTGTTAATTATGAATATTCCACTTTCAT------CTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCTG ....:..:.....x...::..x..xx..-----.x.:.:x.:...x.------...::x.:x.x.::.:.:.xx:x..:x.xx:..::..:.:..:.:::.:..:...::..:..xx:.::x.:xx......x..::...x......xxx....x.x..::::xx:......:.x.:.:.::.x.:x.....:xxxx...:....xx.....:.:.x.:..x.x...:.:.x.:x...xx..... 28M5I14M6D192M 133/234 56.8% 239/94230402 0.0% 11/234 4.7% 153271854 36942701 +3042 chr4 + 190214555 172487205 172487204 172487300 96 TTTCTTTCTCCTTCCTTCCTTCCTTCCTTCCTGTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTG chr4 + 94230402 83326934 83326933 83327029 83326934 83326933 83327029 96 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCTG ..:....x.:.x:.x.:::.x:...:..xx.:x:..........:.:.:x:.:xx:..:x.:...x.x.:.....x.....:...::.:.:..... 96M 58/96 60.4% 96/94230402 0.0% 0/96 0.0% 89160271 NA +4089 chr4 + 190214555 172487240 172487239 172487392 153 TTTCTTTCTTTCTTCCTTCCTTCCTTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATT-GTTCTTTCTGT---TCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCC-ATTTTCTTGTCTCCTTCTTTTC-TTTCTCCTCCATTCTT .....x...:x..x.::.....:........x::.x::.x:.:..x.x..-x...:......---.....x.-...x..:..x::.............:xxxx.::x.:.:.::-x...:...x.:...........-.....::..:x..... 50M1D11M3D7M1I41M1D22M1D16M 101/147 68.7% 148/94230402 0.0% 7/147 4.8% 122310973 67903582 +3440 chr4 + 190214555 172487257 172487256 172487339 83 TCCTTCCTTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .::...:..:...x:.:..x..:.:...::.:::..xx..x....:.........:...::...x.....x..xx:.x..... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 115115230 75099325 +4012 chr4 + 190214555 172487264 172487263 172487411 148 TTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTC---CTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176414 50176267 50176266 50176414 148 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCT----TCTTTTCTTTCTCCTCCATTCTT ..:..x..::x:.x..:..:..:....:..:x.:.xx:.x:.:..x.x..x..::..::x......x.-...x..:..x::.............:x---.::x::...::x.......x...::.----............::.:.x..... 68M1I27M3I26M4D23M 93/144 64.6% 148/94230402 0.0% 8/144 5.6% 122310997 67903558 +3476 chr4 + 190214555 172487282 172487281 172487408 127 CTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTT---TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTC-TTTCTTCCTTTTTATTT ....x:.:..:.....---..:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:..::.:..:::.......-......:......x... 16M3D90M1D17M 78/123 63.4% 123/94230402 0.0% 4/123 3.3% 108790165 81424390 +3621 chr4 + 190214555 172487288 172487287 172487418 131 TTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTT-------TCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCCTTCTTTCCTTCTT-----------TTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTCTTGTCTCAC chr4 + 94230402 50176268 50176267 50176417 50176268 50176267 50176417 150 TTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCAC ....x..::x...:::.:.......:....x.:-------.:..x.x..x..::..::x......x.-...x..:..x:........:.....-----------.:.::x.:..:.:x.:..:..::.......:..:.:.x.x::.... 33M7I27M1I25M11I46M 86/131 65.6% 150/94230402 0.0% 19/131 14.5% 122311020 67903535 +3226 chr4 + 190214555 172487304 172487303 172487411 108 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCCTTCTTTCCTTCTTTTC--TTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 63697128 63697127 63697238 63697128 63697127 63697238 111 TCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT .:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.-..xxx:....x...:..:x.--.:..::.:..:::.............::.:...x.. 52M1I20M2I36M 70/108 64.8% 111/94230402 0.0% 3/108 2.8% 108790176 81424379 +16586 chr4 + 190214555 172489758 172489757 172490257 500 GAAGAATTAAAATCA-CTGCCATTTTACGGCTAACACACACTGATTTTCTGGATGGAACATTTGGTTACACTATACTTTCATTAAATAATATAGTAATTATCACTTTTGCAAGATGTTATTCTATT-CATTTGCA--------TGTACTTTACCATGCTACATATTGGATACAAAATAATTAGATACTGAAAAAGAGGAGTTAAAATGTGGGTAAAAAATCTG--CTGTGGCTTCCAACATAGGCAACTAGTAGAGACAGATGGAACTGTGTTCTTGGGATGTTTAAGGACTTTTAGAGTACTTTGCATCAGCAGCATCTAGAGACCAATTACTGAATACTCTCTGCAGGAGTCTTGCCTCAGGGTTTTTAAATGGATGAATAATATATAAACTCCATGGTTTCCCACTGAGAGAGACTGAAGCAGCATCAGAAAG----AGTCTATTT--GAGTTGAACTAAAAATGAAATAAT----TTGAAATTTGACCTGAAGTCTTTTGTG-TTTACATATGTAGTTG chr4 + 94230402 44446876 44446875 44447384 44446876 44446875 44447384 509 GAAAGATTAAGAGGATCAGTAATTTTGCTGACAGTGCACAGTGTTGCTGCGGATGGTGTGTTCAGCTGTGTCACACTT--ATTATGTAAGACTCTGATTATTTAGCTTGAAAATTCTTCTGCTGTTGTATTAGCCACATAAATTGGAGTTCCCAAT------TGTAAGTTCCCAAATAAGTAGATATC-----ATAGAAGTGAAAATGTGGGTGAGCAGTCTGAGTTGTTCATTTAAACATACACAGCTC-CAAAAACAGATGGAATTGTGTTCTCACAATGTTTAAGGACTTCTAGAGCACTGCATATTACCAGCATCTGGAGACCAGTTACTGAAGAGGCTCCATAGGGGTCCTGCCTCAGGGTTTTCAGTTGAATGAATAATATATAAACTCTATGGTTTCCCACTGAGAGCAACTGGAGCAGTATCAGAAGGAAATAAGCCGTTTAGGAGTTGAACTGAAAATGAAATAACAGCACTGGATTTAAAAATGAAGCCATTTCAGTTTTTCACATGTAGCTG ...::.....:.xx.-.x.:x.....:.x.x:.:::....x..x.x:.x:......x:::..::.:.:::::.:....--....x:...x.:xx.:.....:xxx:...x..:x.x..x.x..:..-:...x..x--------..x.x..:x.x..------.:.x:.x.x.x......x......::-----.x..:...x...........:.:x.:....--:...xxx..:x......x:..:..x-:.:.:..........:........::x:..............:.....:...x:::..:.x........:.......:........x.xx...:::...:...:..............:.:x..:...................:..................x:....:.....:.......:.----.:x.::...--..........:............:----:..:.x..x:.xx.....:.x...xx.-...x..:......:.. 15M1I62M2D46M1I8M8I13M6D26M5D30M2I25M1D185M4I9M2I24M4I27M1I16M 343/486 70.6% 509/94230402 0.0% 37/486 7.6% 128042882 62171673 +3781 chr4 + 190214555 172496555 172496554 172496625 71 CACCTGTAGTTCCAGCTACTCAGGAAGCTGAGGTGGGGGGATCACTTGAACCCAGGAGTTCGAGGCTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x................::::.:......x:xx.x.:.x.............:..:.:x:.....:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 96463348 93751207 +3600 chr4 + 190214555 172500290 172500289 172500363 74 GTACACCTGTAGTGCCAGCTACTCCAAAGGCTGAGACAGGAGGATGGCTTGAGCCTGGAAGATCGAGGCTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x......x.........:x..........x.xx.x.:.xx:.....:..::....x.:x:........ 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 96467086 93747469 +3669 chr4 + 190214555 172504012 172504011 172504095 84 CATGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGCTCTTGAACTCTAGGACTCTAGGAGGTGGA chr4 + 94230402 76033197 76033196 76033278 76033197 76033196 76033278 82 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..::.......::.--....:.:...........::........x.xx.x.....x.......:.x::::..:.:..xx..:.. 14M2D68M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 96470815 93743740 +3242 chr4 + 190214555 172512858 172512857 172512928 71 CCTCACAGCTGTTAAGATTCTTTCATTCTTTCTTTCATCTTCATTTTAGTTAACTTGATGGCTATTTGTCT chr4 + 94230402 73888315 73888314 73888381 73888315 73888314 73888381 67 CCTTTCAGCT----AGATTCCTGGATTCTTTTTTTCATTTTCATTCTTGCTTACCTGGTGGCTATTCAGCT ...:x.....----......:.xx.......:......:......:.x.:.x..:..:........::x.. 10M4D57M 51/67 76.1% 67/94230402 0.0% 4/67 6.0% 98624543 91590012 +32857 chr4 + 190214555 172521229 172521228 172521991 763 ATCTGTTTTGTCCTACACTGCCATTTTTTCA--------TTCCTTAAAGACAATTTGCAAATAGCCTTTCA-GCACTTGACTGACAGAAAAATTCTTCTGACAGTTGGTATAAAACATTTTACCACAAACAGAACTTTGGCATCTCTAGCACATTGCAGACATCTGTTACAATATGCCATAATTTTTAGCACCTCATCATAAAGGCAAATCCAGAACTATGATCT--AAATATAACTAGCATATTTTATATGGGCTTTCCTGCTGTGGACTGCCAATTACGAAGCATGAGTAATGAAAGAAGGTACCCTTTAGAGCAGCCAATTCTCAGAAGCATTAGTTTTCTTTAATATTCTACTTTCATTCCAGGAATGGGCAAGACAATAAGTAAGACATTTCATGTCACTTCAGGATAATATCATGTAATTTTAGGGTAATAAAGAATTCAT------------AAGTGATCAGATAGGAGAAAGTTCATTTACATTCTCTCCAGAGACTTTTATCTCTTCAGATGTGACCTTGTACAATTAAATCTATTTCAAATATCCAGAGAAATGGCAGCTAAGCAGACAATGGAATGCTTCATTTTATGTTGGACTGAAATAAAGTGAAATTAAATTATATGAAAACAGTCAAATGTAATAGGAGATAAAA-------------------GGTTCCACTGAAATTCTTGCTATCTAATCTTATTCATTAGAATTTTCT-AGAAGGATGATTATATTGTGTGCTACGTAACTTGATTTTAAAACTGGCATTTCATTAATATCCCCCCAAAAGGACTG chr4 + 94230402 44457373 44457372 44458142 44457373 44457372 44458142 770 ATTTGTCTTCCCCTTCATTGTTCTTTTTTCAATTGTGCTTTCCTGA---------TGCAAACACTCTTTTAAGTCTTTGAAGGGCTGAAGAACTAT---AAAATTCAAAAAAAAATCATTTAGCACAAACAGACCTCTGGCAGGTTTAGCACATCCGTAACAGCTGTTATAATTTGCCATATTTTTTTATGGAGCATCATAAAGAAAAGGCCATAACTCCCATCTCTAAATGCAACTGGCATATTTCTTGCTGCTTCTCCCGCTGTGGACTGCCAATTACAAAGAGTGAGTAATGAAAGTGTGAACCCTTTGGAGCAGCCAATTCTCAGAACCATTAGTTTTCTTTTATACTCCAGCCTAATTCCAGGAATGTGCTAGATAAGAAATAAGACGTATCATGTCATTTCAGGATAATACTGTGTAATTTTGGGGTAATAAAGAATTCATTTCTGGAGAGAGAAGTGATCTGATATGGAAAAGTTCAATTTCTTTCTCTCCAGAGAGCTTTATCTCGTCAGATGTGACCTTGTATAATTAAATATATTTCAAATATCAAGAGAAATGGCAGCAGAGCAGACAATGGAATTCTCTATTTTATGT---------------AGAAATGAAATTATATG-AAGCAGTC-AGTGTAATGTAAGACAAAGTAGATTGCCACTATTCGTTGTTTCCACTGGAGTTCTTGCTGTTTGATTTTACTCATTGCAGTTCTGTAAGAAGGCAGTTTAGTTTGTGTG-------ACTAGATTTTTAGATTTGCATCTAATTACATTAATTCAGAAAGTACTG ..:...:..x:...x..:..::x........--------.....x.---------......:.x:....:.-.:x:....xx.:.x...:..:.x.---:.x.x.:::x.x....:xx....x..........x..:.....xx.:........:xxx:...x......:...x.......x.....x:::xxx..........:x..:x...x....x:x....--....::....:........:x.::x.x:.:...:...................:...x:.............x:x.x.......:...................x..............x...:..:.x::.x............x..x...:..x..:......:.x........:............:::.........:..................------------........x....x.::........x..x.x.............x:........x.................:........x.............x..............x:...............x..::.........---------------x.....x..........-..:.....-.:......:x:...:...:-------------------.x........:.:........:.:.:..:...:.....:x.:..:.x.-......xx.x...xx.......-------...x......x.:.:.x....:.x....xxx.xx::.x:....x.... 31M8I7M9D16M1I24M3D126M2I220M12I141M15D17M1D8M1D19M19I48M1I22M7D48M 560/727 77.0% 770/94230402 0.0% 79/727 10.9% 128063856 62150699 +3647 chr4 + 190214555 172525734 172525733 172525805 72 GCACCTGTGGTCCCAGCTACTTGAGAGGCTGAGGTGGGAGGATGGCTTAAGCCCAGAAGTTCAAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x...:..:............:........x:xx.x.:.xx:...:.:........:.:x:.....:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 96492528 93722027 +3047 chr4 + 190214555 172528990 172528989 172529031 42 TGTATATATATATATATACACACACACACACACATATATATA chr4 + 94230402 74671076 74671075 74671117 74671076 74671075 74671117 42 TGTATATATATATATATACACACACACACACAAAAAAAAATA ................................x.x.x.x... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 97857914 92356641 +3019 chr4 + 190214555 172560651 172560650 172560698 48 GAGATTTTTTGTTGTTGTTGTTATTTTTTGTTCTGTTTCATTTTTCTC chr4 + 94230402 38625016 38625015 38625063 38625016 38625015 38625063 48 GAGCTGTTTTTTTGTTGTTGGTGTTTTTTGTTTTGTTTTGTTTTCCTC ...x.x....x.........x.:.........:.....::....:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 133935635 56278920 +6689 chr4 + 190214555 172563979 172563978 172564215 237 AATTACAATCCTGTTTTTAATATTATAGTCT-CATGTTATTGTCTAATGATATTTAAATTCCCTTGTGCTTAACTCTGTCTCATTTAGTTTTATTTTCTATTATTAGATCACATTGTGCATTACCCTCTCGTGTCTTAAAGA-ACTCATTACACTTTTATTCTTTAAGAAAATTCCGTAGCTCTAT--TTCAATTATGTTGCAT-TCTATTGGTAATCTATACAAGTAATTAATGCTAAAAT chr4 + 94230402 44476474 44476473 44476711 44476474 44476473 44476711 238 AACTAGACCCGTGTTCATAATATTACAATCTATTTGTCATTCTCTGATAATATTAGCATTCTCATGCATTTAACTGTGCTTCATTAAGTTTTATTGTCTACTATTTTACTACCCTATACATCAGCTCTCCAAGGTTTAAAGAGATTAATTACA-TTTTACTCACACAGTAG--TCCATACTTGTATGGCCTAATTA-AATGCATCTTCACTGCTAATCCAGACAAGTAATTAATAATAATAT ..:..x.x:.x....:x........:.:...-:x...:...x...:..:.....x:x....:.x..:::......x..::.....x.........x....:....xx.::..x:.:.:...:.x.::::.:x.x:.......-.:.x......-.....:..x:xx..x.:--...:..x:.x...--:::.....-:x.....-.::.:..x.....:.x.............:x...x.. 31M1I110M1I10M1D17M2D13M2I8M1D7M1I37M 159/233 68.2% 238/94230402 0.0% 9/233 3.9% 128087505 62127050 +15714 chr4 + 190214555 172573001 172573000 172573376 376 CATGTTTTCTTCTTACCCCAT-----AATATCACTAAATAGAACAGAGTGCAATTACTATTATAATTACTGTAAGTGTTTACCCGGCTACATGATTTGTCAAATTTGATTCCCCTTTAAAAATGGCATCTTTTACATCCAATTCACCAAGCATCAATAAAATATAAAAACAATTATAAATTGAATTTCCATGCAAATGTGGCCTTTTCCCTACTCTGCATGAATGCACA-CCATCAAACTATTATGCTTCATTGTTGACAATGTACTGGTGAAATAACCATGAAATAGCCATGTTCTAATTGTTTTGCTAGTTGCCAAGGTCAAGATTCATTTTTCCCCAAGAA---ATTTTATAAAGGTCATTACAGCTTAATGAAAGTTTGCA chr4 + 94230402 44478811 44478810 44479192 44478811 44478810 44479192 382 CACTTTTTTTTCCTCCTCTTTTTAAAGCTACCAAGAGAAAGAACAGAGAATAATTGCTGCCATAATTACTGAAATTGTTTACACAGCTACATTATTTGTCAAGTTTCATTCTGCTT-AAAAATTATTCTTTATACATCCAATTCACCAAGCATCAATAAAGAATAGGA-CAATTAAAAATTGAATTTCAATGCAAATGTGGCCTTTTCCCTATTCTACATGAATGCACATTCATCAGGCTCATAAACCCTGCTGTTGACAGCATACCATTGAAATAGCCAAGAAACAGCCATACTGTTATTGTTTCATGAGCCTTTGATATCACAATTCATTTCCTTCCAGAAACAGATTGCA-AAAGGTCAGTAACATGTCACAGAAATCTGTA ..:x....:...:.x.:.:x.-----:x..:..xx.:.x.........x::....:..:::..........x..x.......x.:.......x.........:...x....:x...-......x::x::..x............................:x...::.-......x............x.......................:...:............-:.....::..xx..x:.:::::........:::...::x.......:...x....:......::.x.x.......:::x..::x:::.x:...x:........::::...::..---...x:.-........x..xx::x.x.:::..:.:..:. 21M5I90M1D51M1D60M1I114M3I6M1D31M 267/373 71.6% 382/94230402 0.0% 12/373 3.2% 128094190 62120365 +3098 chr4 + 190214555 172580756 172580755 172580799 44 TTTTGTTTTGTTTTAATTTTTTTGTTTGTTTGTTTGTTTTTGAG chr4 + 94230402 18559151 18559150 18559194 18559151 18559150 18559194 44 tTTTTTTTTTTTTTAAGTTTTTTGTTTGTTTGTTTGTTTTAAAG ....x....x......x.......................x:.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 154021605 36192950 +4004 chr4 + 190214555 172582285 172582284 172582354 70 GGCCTTGGGCAGGTTATTTAAACTTTCTGAGCCTTAGTTTCTCCATCTGTAAAATGGAGTTAACAATAAT chr4 + 94230402 83501141 83501140 83501210 83501141 83501140 83501210 70 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAAT .:.::......::...:....x..x.x..x....:.....::...:.............:.:.:.:.... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 89081144 NA +13354 chr4 + 190214555 172590583 172590582 172591011 429 CTTCA--GAATGAACATAGTATAATTCACTTTTCAATTTCACACCCAAGGATTCTGTAATGGGGGAATGTAGGCGGTTAAGTTTTCAGTCATACCAAATGGGTTTTTAATACTTAAAATCCATCTG-TTTACATACAAAGAGTAAATGCCTGGAAATGTGGCTTCTGAAATGCAAATGAAGAGCTACAAGACTTATTTCTGCTTGGGAAAATTCAACACTTTTCTGACAAAAGGGAGTAATAATAGCTCCTGTAAAATCCAATAATATTATAAATGATATTAGATCCAATAGTGCATGATATGTGTATGGGGAAATCTATGGTCTCTTGTTTGTTATTACTGCGTCGTGAAATGCTTCATAAATTTGAGGAAAGGAAGGATATTCAAATTAGCAAAGTACTTTGCAAATAGTCAGCTATACCAATTTTAGGA chr4 + 94230402 44481454 44481453 44481880 44481454 44481453 44481880 427 CTTCACTGACTGAGAATATTAAAATTTATTTTTCAATTTCGCACTCAAAGATTCTGTAATGGAGAAACGCAGACATTTATAACTTAAATCATGCTGAATAGACACTTTAGATTTAAAATCTACCTGATTTACTTCCATACAATACATCCCCTGAAATGAGGCCTCAGAAAAGCAAATGAAGAGTTACAAGACTCACTTCTTCTTTGGAAAATTCAGTAGTACTCCTGTGATGAGAAGTAATAATATCTTTTGTGGAATC---TATAATCATAAATGATGTTTAATGCAGTGGTGCATGATAGACACAGTGAAAAGTATACAGTATCAGTCTCATTGAGACAGGACCACCAAGCAGTTCATTAACGTACAGGGAG--ATGAGGTGAGAGTGAGTACGCCCGTTTGTCACTAACCAGCTGTTGGAATCCCAGAA .....--..x...:x...x..x....:.:...........:...:...:.............:.:..:.:..:.:x...x:x:..x.:....:.::...:.::x:..x.x.:........:.:...-.....x.x..x.x.:..x..x..:x......x...:..x....x............:.........:.:....x...x..........::.x.x:..:x:::.x::.:..........x..::...::....---..xx..:.........:..x:..x..:.:..........x::::.xx.::..:.x..::..x..xxx:.::..:xx..x.x::.::x..:::x.....x..:x.:x:.::..--.x..x:.xx:.:.x..:.x:x:xx....:x.x..::.....:.xxx...:::..:. 5M2I119M1I132M3D112M2D56M 272/424 64.2% 427/94230402 0.0% 8/424 1.9% 128109129 62105426 +16092 chr4 + 190214555 172597071 172597070 172597500 430 AATCCTATTATTTAACAATATAAGTGAGAATATTAGCTATCCAAATATTGCCAGATGTAATTAATGTCCTTAAATATTGCCCCATTAGCATGCATTCTTATGAGCTGGAGTCACAAAACTAATGGATTTGCTACCCAGGGGACATCAATTGGATATGACACTGCCTCAGTTCTCTGCACGCC-CTATTCTACTGTCTTTATTATAACATGATTACTTTTCATTTGATTCTATAAATTGCATTCTATCAAATTACTATAGTGGAGCCTGTGATATGATACTCTCACTAATTAAAATCTTTGTTTTCTCTACACTTGGGTTAATATAGATAGTTATTTTTCTTGTT-----TCTTACTAACCACTGGAGAAATACGTTAGGAAATACTTCAGGCTCAGCAT--CTTTTGTGTCATTAAATAATAGTTATTTTTGCTTTGC chr4 + 94230402 44482341 44482340 44482753 44482341 44482340 44482753 413 AGTTTTGTTGTTCAGTAGTATAAATGAGAATATTATTTACATAAATATTGCCACATGTAATTAATGTCCTCAG----TGCTTTGTTTGCGTGCATCTTGATGTGTTCCTGCAGTGAAACTAATAGATTTGCTACC-AGGGGACATTAACTGGAGGTGACACTACTTTAGTTCCATGCACACTGCTATTCAATTGTCTTTATTGTAACTTGATTACTTTTCTTTTGATTCTAAAAATTGCATTATATCAATTTCTGATA---CAACTTCTGATATGATTTTCTTACAAATTAAAATACTTGTTATCACTATACATTGGTCA------------ATTTTCCTCATTAATCATTTCAGTATTCCCTGGAGGAATGTTTCAGGAATTGCCAATAGCCCACTACTGCATTAGTGCCGTT-----ACAGTTATTAGTGCAATGC .:.::.:..:..:.::.:.....:...........x:..:x:...........x................:.:----...::::..x..:.....::.x...x.:.xxx.:x:::........:...........-.........:..:....x:.......:.:.:.....:x.....:.:-......x.:..........:....x............x..........x..........x......x..x:x...---x.:.:.x.........x:...:..x.........x:.....x..x...:..x.x...:.------------.....:..::..-----.:.:.x..x:.x......:...::x.:.....x.:.:xxx:..:..x:.:--.x..x...:.:..-----.:.......xx...xx... 73M4D58M1D46M1I75M3D59M12D12M5I50M2I13M5D19M 295/405 72.8% 413/94230402 0.0% 33/405 8.1% 128114730 62099825 +3387 chr4 + 190214555 172606581 172606580 172606673 93 TGTATATATATACACATATATACATATATACATATATAGTATATAT----ATACTATATATATACTATATATATAGTATATATATACTATATATATA chr4 + 94230402 91205955 91205954 91206051 91205955 91205954 91206051 97 TGTTTTTTTGTGTTTATATACGTATACATAGATATGTAATAGATTTGATGATAAAAAATATAAACTATATATATAGTATATATAGCATATATCTCTA ...x.x.x.:.::x:.....:::...:...x....:..:..x..x.----...xx.x.....x.....................xxx.....x.x.. 46M4I47M 67/93 72.0% 97/94230402 0.0% 4/93 4.3% 81400626 NA +3168 chr4 + 190214555 172609600 172609599 172609653 54 TTTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578266 26578265 26578319 26578266 26578265 26578319 54 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG .....................:.:.:.x.x.xx..:...:...x...::..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 146031334 44183221 +20569 chr4 + 190214555 172614722 172614721 172615725 1004 TGACCAGATTGGCTGTTATTCTTAAAAGATGAGGGAAGCACTTACAGCATCGTAAGCCTAATAAGGTGGGTGTTGTGAATCAATTTGTACTGTCCTTGACTTTCTGCTTATATTAGAATTCTAAAAGATCATTAGCCACCTCTGGGATATGTTTGATTAATGGGTTTGGTTAAACAAAAAAGGTGAGGTCAACCGTGAGCAGAAAGTTTAAAAAAAATGTATTCCAGAAGAAACGTGTGCTTCCCAAATTGCAAATGAG---AAGTTCATTCCTTAGGCATGTTCTAATCAATGAAACCATGTGTTCTACTAAGT-TGACCTCAAAGGAGACTTTTAGCCACCCTGCTTATTTGCCTTTCAGTTACAGGAACGTGACTTCTGAGGCTAGGGTATTAGCACACCTGCTGAAACG--GTGTTAATCTAGGT-------------AATACAAAGTCCCCAAACACATGCTGTTAATAA---GGCAGGTAGTTTAAAAAAAAAAAAAAAGACTAGTCTAATATCTCACAGTGAGAAAAAATTCTTCTCTGTCATTAGAGAGGGTGAAACATGCTCCTGTTCTTTTGA----CATTATATACCTCTTATT----GTTTTTCCT-TTTTATTAAAAATGAATCTCT---TCTGCTG-----------------TTTTCAGCAGTGCATTTTTACTTCTGTATTATAATAGCTCTCCTCTCAATGA------TTCCATGAAGACAGGCTGGGATAATACAC--------CAAGGAAA---AGATTTTGCTT---TACTTGCCAAAATGAGACCATACTTTGTT----------TTTTCCTTAACCATTGCCCC--CTTACTCCCTGGAGTTTATCACCCCACACAAATTAAGCTAATTTTATAAACTGAAAATGCTCTTTC----TATTAAGTTCTCCTCAAAGTGAAAGCAATGAGCTTCATTCTGTTTATTACACTGCTCTTCACAATTAGTTTTATGATGTAT--GGCAAGAATGTGTATACTATAAATCGAGTCTATAACTCTTACATATCTAGTGATAGTTATGAATCCATTGAGTAGAACTGAAAATACAGTAT chr4 + 94230402 44484087 44484086 44485096 44484087 44484086 44485096 1010 TAATTAGATAGGCTGCAATTCTGAGTAAACTAGAGAAACATTGCCAGCATTGTAAACTTAATAAGGTTGGTGATGTGGATCAATTTGTGTTGTCCTTGACTTTCTGCTTCTATTAGAATTCTGGAAGATCATTAACAACCTCCAGGATGTACTTGATTAATAGGCTTAGTTAAACAAAACAGGTGAGGTTAAGCGTGATCTGAAATTATAAAAAATGTGTGTTCCAATGGGAATTTTGACTGTCCAAATTATCAGTGAGGGTAAACTCAATCTGTATTGA--TTTTGATCAATTATTCTGTGTTTTATCATAGGGATGGCCTTTAA-GAGATTTAT--------------TTTGCCTAT-----------ATATAATTTTTTATGTTA------TAGTACCCTTTTAAAAGCATTATATTAAAGTAGATATGTATGTAAAAGAAAACTAAGTTTCGAAG---ATGTTTCTGAGGAACTGGCA--TACTT-----------AGGGACACCATACT--TATAACACAGTGAAGTGCACATCTTTTATGATGT--------------CATCCTTTT-TTCTTGTGAGGATGATAATATACATTTTATTTAGCATTTATATTATTTTATACAGAAGGCAACTCTGCATTCACTGAGTGAAGATGATAATGTTTTTTAACAAT-TAGTAGTCTCTCTATTTTTTACTGCCCTTTCTCCTTATTCCTTCCTTCTCCTGGAATTTGTCAGGCAGAACACTTATTTCAGGCAAAGAAACACAGAAATTACATAGGCACTTG----AGTAGCACTATGGTTTGCTCATCATTGACTTTTTATTTTCTGTTGCTCTTATTTTCTTCCTCGGGTCCATTGGTTTGTGCAGATTAAGCATGTTTTATAGCCTAAAGATGCTATTTTTGTATACTTTGTTCCCCATGAGATGAAAGCAATGAGTTTCATTGTATTTATTTCTGTGCTATTCACAATTAGTTTTATGATCTATACAGCAAGAATGTCTGTCTTGTAAATCCAATCCGTAACTTTCGCTTCTCTGGTGATGGCAATGAGTCC-----------CTGGAGATACAATAT .:.::....x.....:x.....x.:x.:.:x..:...:..:.xx......:....:.:.........x....x....:..........::...................x............::..........:.x.....::....:.::.........:..:..:...........x.........:..x.....x.x....x.x.......x:...:.....:x:.:..:x.xx:..x:.......::x.:....---..::...x..:x..xxx.--..:.:......x.xx.::...x..x.xx..:.x-..:...:x..-....:..x.--------------.......x.-----------.::.:.:..:.x.x.:..------...:..x.:.x:x:..:.:--:.:....xx...:.-------------..x..x....::.x..:---...:.x:.:.x:.---....--..x..-----------.:::.x..:.xx..--...xx........::x:x.xx....:.x..x::.--------------...x..::.-.....x...----x..x......x.:.....----:...x.x:.-......xx.:..x.x.x....---.:::...-----------------....:.:..:.-:.x.xx.x::...:.x..x..x.:x.::.:...::x..xx------.::.x..:.:x:x.x.x..x.x..:..x:--------...:....---...xx..:.x.---:.....----.:.::x..:..:x....:.----------....:x..xx.::....:.:--:..x..:...x.:..::..::x::::::..:.......xx:.......:x..:..:.....x...:----..:.xx....:..x::.::.............:......x.:......x.xx....x....................x...--:..........x.:.x:.:......x.:..::.....:.::.x.x...:.....:.:x....:...-----------...:.:.....:... 259M3I18M2D33M1I10M1D9M14D9M11D18M6D19M2I14M13I17M3D13M3I4M2D5M11D14M2D34M14D9M1D9M4I18M4I9M1I21M3I7M17I11M1D40M6I29M8I8M3I11M3I6M4D19M10I20M2I66M4I81M2I66M11D15M 627/921 68.1% 1010/94230402 0.0% 172/921 18.7% 128130635 62083920 +3543 chr4 + 190214555 172624238 172624237 172624292 55 ACAGGAGTGCTTTTTTGTTGTTGTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTGT chr4 + 94230402 89868334 89868333 89868388 89868334 89868333 89868388 55 ATGGAAGGGTTTTGTTGTTGTTGTTTTGGTTCTTTTTTTGTTTGTTTGTTTTTAT .::.:..x.:...x.............x...:...x.................:. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 82755904 NA +9582 chr4 + 190214555 172657251 172657250 172657503 253 GAGCTGTCTATGATTAGAGTCAGTAATTATGCTGTGA------GATAATCCATCATGGTGGGTTTTGTTTGTGGCTCGCGATAATTAATGATGATTCCGCAGAACAGCAGTTACGCAATACAGAAGAAATTCATCTTCTAAAGGTCAGCAAAGAGTTGAAGCATGAAGTAAAATAAGCCCATAGCTGCTAGCTATTTTTTACCAATCAGTCTTTGTGAGTTTGTTTTT----TATTTTGAAAGGCATAGTGAAAATGTTCATA chr4 + 94230402 44492613 44492612 44492866 44492613 44492612 44492866 254 GGACTGTCAGTGACTGTGGTTAGTAGTTATGCTGATGCAGGCTGGCGATCCATCATGGTGGATTTTGCATGTGGCAGCTGATAATTAATCATGA--------GGCAGAAACTACAGAGTATAGAAGAAATTTGTCTTCTAAAGGCCAATTCAGGGTTGGAGCATAAAGAGTAATGAGCACATAGCTGATAGTTCTTGTTTACCAATCAATCTTCCT-ATTTTGCCCTTAAACTCTTCTGTAGAGTTTGATGAAATCTTTCATA .::.....x:...:.:x:..:....:........xx:------.:::..............:.....:x......xxx:..........x....--------::...x.::...:x.:..:..........::...........:..::xx..:....:.....:...x:x...:...x........x...:.x..x...........:....:x.-.x....:::..----.x..:..x.::.:x.::.....x:x...... 37M6I51M8D114M1D11M4I31M 173/244 70.9% 254/94230402 0.0% 19/244 7.8% 128164638 62049917 +3356 chr4 + 190214555 172713229 172713228 172713302 74 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGAGAGAAAGA----GAAAGATTTATTTTAAGGAATT chr4 + 94230402 87420509 87420508 87420586 87420509 87420508 87420586 78 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAAAAATGTTGTAAGCAATT .:...........:.:........:.x:x.x.....:.:.x.......:...----:...:.xx.:..x....x.... 52M4I22M 55/74 74.3% 78/94230402 0.0% 4/74 5.4% 85292720 NA +8383 chr4 + 190214555 172721656 172721655 172721967 312 GGGCACATTTAACAGTGGGTTG-TCCTGTATTCTTTGTCAGCTCAAATGAATGCTGTGAGTAGACAAACACATTAAATGACTGTCATTAGATTCATCTAAATCAATACTTTATGTGGTCTTTTAGATGCAGGTGCACCAAACAGCACTCTCTCTCTACTTCTCGTTATGTCTAATCAAGCACTGCATATGCAGTGCAGCTAGAGTGGTAGGGATAATGAACTTGTGTTAAGCATTTTTCCAAGACTCCACTGCCAGCATCATTAGGGCTTTGCTAAATAGAAGA---------ATTTTGTTGCTTAGTAACACAAATATTGC chr4 + 94230402 44517805 44517804 44518117 44517805 44517804 44518117 313 GAATACGTTTAACAATGTATTGAGGCTGAAGTCAT-ATCAATTCAAATG------TTTAGTAGCTACGCATATTAAATGGCTGTTAGAAGAATCATCAAAATCAATACTTCATTTGTTTCTCAGGATGTGCCTGCACTGTAGTTTAATTCATTCCTG-GTCTAATTATCCCTAATCTGCTTCTCCACATGCTCAGCAAGTGGAGCAATTGAGATAATAAAGTTGTATTAAGCA-TACTCCAAGGCTGCCCTGGCAATAATGCAAGGGTTGTGAATAATAGAGGGATTTTGTTCATTTTGTTGCTTAGTAACAAAAATATTAC .:::..:.......:..x:...-xx...x.x..x.-:...::.......------x.x.....x:.x:..:........:....:.xx...x.....x............:..x..x.::.:x:....::xx.....::x.xxx:.x.::x.::..:-x...x:....x:......x:x:x..x..:....xxx...:x.:...:::.x.:......:..x....:.......-.x:......:..x.x...x..::.x:::x....:.x..xxx......:.:---------...................x.......:. 22M1I12M1D13M6D102M1D75M1D50M9I29M 201/303 66.3% 313/94230402 0.0% 19/303 6.3% 128203851 62010704 +4007 chr4 + 190214555 172730940 172730939 172731022 83 CATGGTGGTATGCACCTGTACTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--....x....x.:...........::........x.xx.x...x............::..x.xx:..:..... 9M2D72M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 96697743 93516812 +3214 chr4 + 190214555 172749071 172749070 172749199 129 TTTTTGTTGTTGTTGTTGTTTGTTTTTTTTTTGATAGAGAAGAAGTTTCACCATGTTATCCAGGCTGGTCTCAAACTATACAATT--ATTATTTGTCAATTAAAAATTTAAAAAGATAACCACAAAAAAGG chr4 + 94230402 27444629 27444628 27444753 27444629 27444628 27444753 125 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGTAG----GAAATACAACTGTATTGTTAATGCATTTTTTAAAAAAAATAATTGGACTATTAGGCTGCTTAAATGTTGTTAGACTAA--AAAAAAAAGG .....x...................x.......:...----...:.x:x..::.:..:.:x.x..xxx.:.:...xx.x.:....--.:....x.x.x::.x...xx..:xx.::x...--.x........ 37M4D44M2I32M2D10M 84/123 68.3% 125/94230402 0.0% 8/123 6.5% 145304442 44910113 +3465 chr4 + 190214555 172756514 172756513 172756587 74 GTACACCTGCAATCCCAGCTACTTAGGAGGCTGAAGCAGGAGAATCGCTTGAACCCAGAAGGCCGAAGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x..:.:.:..........:::.......:x.xx.x...x.:..............x::x::.:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 96723310 93491245 +3508 chr4 + 190214555 172758396 172758395 172758465 70 CATGGTGGCGAGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x....:.:...........::........x.xx.x...x::...........:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 96725199 93489356 +3356 chr4 + 190214555 172770130 172770129 172770207 78 GTGGTGCACACCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCA chr4 + 94230402 76033201 76033200 76033276 76033201 76033200 76033276 76 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .........:--....:::...........::........x.xx.x...x.:........::.:..x:xx:..:..:. 10M2D66M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 96736929 93477626 +3316 chr4 + 190214555 172788237 172788236 172788306 70 CACCTCTAGTCCTAGCTACCTGGAAGGCTGAAGCAGGAGGACCATTTGAGCCCGGGAGTTTAAGGCTGCA chr4 + 94230402 76033207 76033206 76033276 76033207 76033206 76033276 70 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...x.x....:.:......:..:........:x.xx.x.:.x..:....:...:.:..:..x:.....:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 96755030 93459525 +19301 chr4 + 190214555 172793597 172793596 172794242 646 TTCAAATGAAGATAAAG-AGGGACAAACAAAAGAATTACAATCGAAAATTTGTTGCTGGACTATCAGTAGAGGAGACATAATTCTGCCCTTTATCATTACTTGTCATGCCAGTGACAGACTATAAAACTCGTACTGCTCAACAATTCTGTACTCGTCACTTTCTGAGCCAACTTTTGCCTTGGAAGATGCTTGGCATGTTTTAGACATATGATTTATTGCCTCATTTAGTCAAGCTTGCACAGGCAACA-ATGATCTATATTTTTGTAAATTACAAATTAGCCAACTTTCACTTATTCTTAGTGACAGAAGTGATATATATACATACATATGTGCATGTGTGTGTATGTATTCTCCGAAGAACACCATTTATTTATTGCTTGGTAAAAAAATTTAAATAATGACTTCTATTCCTTCTGCCTGTCCAAGAAAAGAAAATTTATGCAATACTGTAGAACAGAAATGCAGTCATCCTGCATCATTGTTTTTCAATGTTTATTGTCTTGGAAAAAAACAGCCTAAGCAGATTCCAGTACTAATAAACAGCCCTGCTGTAGAGGTTATTGGCTATTTAAAGGCCATATTACTTCATTTTGCTTTCCATTTTGCA-AATACATTTTACACTCTTTTGGGAATTCCTTCTAAAATT chr4 + 94230402 44537190 44537189 44537794 44537190 44537189 44537794 605 TTTAAATGAAGACAGAGTAGATCCACACAAAGTAATTACAATGGAGAATCTGTTTACAGATTATCACTGGAGGAGACATAATGTTGCCCTTTATCATCACTTGTCATAGCAGTGACAGCCTGTAAACCTCCTGCCTGTGTATTATTCTTCATTTATCACCACCTGTGATAACTCTTGGCCTGGTAGGTGCCTGGCATGTGTCAAACATATGATTCATGGGTACATTTGATCAACACTGTGAAGAAAAAGTATGATGTATTTTCCTTTAAATTACAAATTAGACATTTATTCCCCACATCTAGTGGCAGGAGT--------------------------TTTGGCTTCTTTATATCCAAAGTGCACCATTTATAGCTCACT-----GTAGAATTTAAATACTGGCTTCTCT--CTTGTGCCTAACTCTGAAAGTGAAATTTATGTAATATTACAGCATATAAATGAAACCATCCTACCTCCTTGT---------TTTATTATCATGG--TAAACTTTCCTGAACTGATTCCTTTGGTAATAAATGGGCTTAATGTGTTGTCTTCTGAAGATTTAAAGGCCATTTTATTTCGTGTTTCTTTTAATTTCACACACTTTGTTATAACTTCTTTCAGAGGATTTCTTTAGAATT ..:.........:.:..-..:xx..x.....:x.........x..:...:....xx::..:.....x.:.............x:.............:.........:x.........x..:....x...x.:.:xx.xx.:x.....x:.:.::....:x:...x.x:....:...x.:...x..:...:........x.:.:..........:..x.x:x.....::....xx:..::x..:x..x:-.....x...x..::.x...............x..x:.x.:x.::.:x::.....:...:...--------------------------.x..xx.x:x.xx.x...:...x:..........xxx.::..-----:x.:..........x..:.....x.--...x.....:x.:xx....:x:.........:....:.::..x.:.x.....x.::......:.x..x....---------......:..x...--x...x:xx...:.:.x......xx.:x.......::.x.:.:x...:xx.x:.x:..:xx.............x...:...:.x..x....:x....::..-.x.x::..x..xx:.....::.:::x.:::.:..:.... 17M1I231M1I62M26D42M5D25M2D72M9D13M2D101M1I39M 407/602 67.6% 605/94230402 0.0% 47/602 7.8% 128256407 61958148 +3079 chr4 + 190214555 172794482 172794481 172794537 56 AGAGGTCACAAAAAGCAGAGATGAAAAAGACCTATTAGATCATTTTCTCCATTCCC chr4 + 94230402 87234898 87234897 87234953 87234898 87234897 87234953 56 AGGAACCATTGAAATTTGAGATGAAAAAGACCTATTAGGTCATTTGGTCCATCCCC ..::::..:x:...x:x.....................:......xx.....:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 85559584 NA +3203 chr4 + 190214555 172802789 172802788 172802834 46 TCAAAAAAACAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 + 94230402 49372039 49372038 49372084 49372039 49372038 49372084 46 TCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAA .................x..xx.x......:..:............ 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 123430750 66783805 +3112 chr4 + 190214555 172802798 172802797 172802834 37 CAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 + 94230402 76741965 76741964 76742001 76741965 76741964 76742001 37 CAAACAAACAAACAAAAAATAACAACAACAACAAAAA ................x..:................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 96060833 94153722 +13755 chr4 + 190214555 172809012 172809011 172809552 541 CCAGGATTTTCATCTGACTTTACCCAGCAGGA-CCAGAGGGCAGAAGCCCATCTTT--GGAGTGTTGGCTAGGATTACACGCTGCAGCTGTCAG----CCAGCAGTAACTGCA-TAACAGACCTCTGGCATGTCAGTGACTTT-TGTGTTCAAAAAAGGGCAATATTTGCAGTTTACAAAGCATTCTGGAAAGT-------GTAAAATCTAAAAATCTT------ACTAGTATCTCCCATCTAGATG--AGGAGACAAGAATGTTACCCCAGGATTCATCAGTCACATACTCTCTATGCACAAACAACCGTGAATAATTCAGCTGCAACTAATGTTTTGCGTTTTTTCTATGCATTCTCTACTTCCTACCTAGAACACCTGAAGGATAAATTGGAAGAATACATGGCCCGATTTTCCAAAGTGAGGATTGTTCGCACCAAGAAAAGAGAAGGACTCATCCGGACCCGTCTCCTGGGGGCATCTATGGCCAGAGGAGAAGTCCTGACATTCCTGGACTCCCACTGCGAGGTCAATGTGAACTGGCTGCCCCCACTCCTCAGTGAGT chr4 + 94230402 44541909 44541908 44542426 44541909 44541908 44542426 518 CCAGAATATTTATGTGGCCTTGGGCTGCGGGAACCAGAGGATGCATGAATATCCTGCAGTTGTTTTGGCCGTGATTATAT--CGCAGATGGCAGGTTGCCAGTAGCAACTGCAGTAAAAGG--TCCAGAGAGTCAGTGTCTTCCTCTGGGTGATAAAACACAGCATTTGCACTTTCTGAACCATCTCAGAGAGGATTTGTGGCAGATTTTGGAGGTCTTGAAAAGACAAG------------AGATGGAAGTGGATAAGCTTG------CAGGTTGTAT--GCCAACCTGTCCTTCTGTTGGCTCCTCCAGGCTTGGCACAACTGACACT--TTTTTTGC---------------------CCTTCTTTCTAGAACATTTAAAAGAGAAGCTGGAGGAATACATGGTCCGTTTTGCCAAAGTGAGGATTGTACGTACCAAGAAACGAGAAGGGCTCATTCGGACCAGACTGCTAGGAGCCTCGCTGGCTAGAGGAGAAGTCTTGACATTTCTGGATTCCCATTGCGAAGTCAACGTGAATTGGCTGCCTCCCCTGCTTAGTAAGT ....:..x..:..x..:.:..:xx.x..:...-.......:::x.x.xx:...:.x--.xx..x.....::x.....:.:--:....x..x...----....:..:.......-...x..:--..::.x:x.......x...:-.x..xx::.x...:x:..::.......x...x::..x...::::..:..x-------.:.:.x.:.::.::....------..x..------------.....--..x:..:...xx..------....x.x:..--.:..xx:xx..::.x..:xx:xx.xx..:x.xx.:::x..:...xx...--.x......---------------------.:.:..x:........::.:..:..x..::....:..........:...x...x................x..:.........x.......:.....:......x.x..x..:..:..x..xx....:............:.......:.....:.....:.....:.....:.....:........:..x..x..:...:... 32M1I23M2I22M2D12M4I15M1I7M2D20M1I50M7I18M6I5M12D5M2I14M6D10M2D49M2D8M21D204M 342/494 69.2% 518/94230402 0.0% 71/494 14.4% 128267103 61947452 +26000 chr4 + 190214555 172813238 172813237 172814007 770 TGACAGACTGGGGACAGGTCAGGGCAAAAATGTGACAGAGGTAGAGCTAAATGGACTTCTGCAAGTCTCTCTGGGACATAACTTTCTTAAAGGAAAATACAACAACTCTAATTGGACCTAATCGCTGTCCCATCACATTAAGTCC----------AGAATTCAGAGATTCCTGAAAAGGG-----CTCTAAGGAGGACAGGGAGCCACGGCTGCAAGCATTATGCATTAGTGGAGGACTGTAGGCTTCTCTTTGCTGAAAAATGATAGATGACCTAGGCAGGCATGTCATTTCCTATTTTGTGCTTTCATTTTTCAGACCAAATTGCACTAAACCACAAAACCATCGTGTGTCCCATGATCGATGTCATTGACCACAATCACTTCGGGTATGAGGCACAAGCTGGGGATGCCATGCGAGGAGCCTTCGACTGGGAAATGTACTACAAAAGAATCCCCATCCCTCCAGAGCTCCAGAGGGCAGATCCCAGCGACCCTTTTGAGTGAGTAGCAGCCAAGGGAGGGGCCGAGGGGGTGAGGGCAGGTAACTCA---------TTGCAGT-GTTAAACCTGGGCTCAAGAA-------GACAATTATCTC----TAACAAAATGGAATA-AAACAGGCGGCAACAATATGCAAAACATCACAGAAAGGTCAGACCTACACCCTGTAGAAAATTACAAGCTGTATCGAATTCATGGAACACCCCTTCTTAAACTTTGCTAAGCATGAAACTGTACAGATGAAAGAACCAGGAAAATGCATAAACAGAAAATAC-----ATAGAAAAGGAAGGCATGT chr4 + 94230402 44546798 44546797 44547582 44546798 44546797 44547582 785 TGACAGATTGGGGACAGCTCAGACTAGCAAAGTGACAGAGATACAGATGACTGGAATCCTGTGGGTCTCAGAGGGTTATGCCTCCCTTTAAAGAA----------CTGTAAATGCTTCTAATCATTGCCCAACTGCATTAAGTCCGCTTAGACAAAGGCTTGATACAGATTTGAAAAATGAAATGTTTTGGGGGCCACAGGAAACGAAGCAACCAGTCTTCAAACATCAA--AAAACCTGTGGGATTCACTTTGCAGTAATATGACAGATGGCTTGACTAGACATGCCATTTCCTATTTTCTACTTTCATTTTTCAGACCAGATTGCACTAAACCACAAAACCATCGTGTGTCCTATGATCGATGTCATTGACCACAATCATTTTGGCTACGAGGCACAGGCAGGGGATGCCATGCGAGGAGCTTTTGACTGGGAAATGTACTACAAAAGAATCCCGATTCCTCCTGAGCTCCAGAGAGCTGATCCCAGCGACCCCTTTGAGTAAGTAGCAATAAAGGGAAGAG-TGGGAAAATGAAGCAAAACAAGCAAAGAAGGCGGCTGCAATAGAAGAAGCCAGGCCCAGGAATTTCCATGCAGACTGCATCGCAGTAATTAAAGGTAGTAGAAGCAAGCAGCTACGAACTCCAAA--CTGGCAAAAAGATCAGGGCAACAAGTTGTC-AAATTCTCAAGCTGTGCTCAGT------AACA---CTTCCTGATCTTTTCTGGCCTGGTGGCTTTGCAAA-AAAAGAAACAGACACATA-GTTAAGAGAAGGTATTGGCATTGGGAAAGCAATGAATGT .......:.........x....:x:.:x..x.........:..x..x.:.x....x.:...:::.....xxx...x:..:x..::...x..:...----------..x...x..xx:......::..:..x.:::..........----------..:x..x.x.x.xx::......:x.-----:.:.::..:xx.....:.:.x.x.xxxx..:x.x.:.x:...:.:--:.::x....:..x...x......x.x..x....:.....:.:.::x:..:....:.............x.:..................:................................:..........................:..:..x..:........:..x....................:..:.............................x..:.....x...........:..x..............:.......:.......::x......:.:.-:.:.::::...:.xx.:::..x:x.---------:....:.-.xx:..x.::...:..:...-------.xx:.:.::x..----...:x...x.x.:..-..:..:..:..x..:.xx.x....--x.x:..:....:....:x.x...xx:...x-...x.:x........:::x.:.------....---....:.:.x....x..::x.xx.x::..x.:..:.-:......x...:x.x..:-:.x..x....::..:-----x.:.:....x..x.x.... 95M10D40M10I25M5I45M2D292M1D25M9I7M1I20M7I12M4I15M1I24M2D30M1D22M6D4M3D35M1D18M1D15M5I19M 527/743 70.9% 785/94230402 0.0% 69/743 9.3% 128266440 61948115 +3313 chr4 + 190214555 172828132 172828131 172828214 83 CATAGTGGCAGGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGGTGGGAAAATTACTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.....:--....x....:.:............:........x:xx.x:..x:.........::.:.:x:xx:..:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 96794935 93419620 +3388 chr4 + 190214555 172843919 172843918 172843988 70 CGTGGTGGTGCACACCTGTTACTCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::.........:--...x::........:...::........x.xx.x...x.:.........:.... 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 96810722 93403833 +22385 chr4 + 190214555 172856608 172856607 172857537 930 TGATAAAACATGAAGGTTCATTGACTGTGGTTTCTACTCTTCTGTCTGGCT----TTACAACAGCTTCAAATTAAAAGCAGGCAGGACAAGGGGATAATAAAGTGTCCAACCTCATCAGCTTTCAGCTTTTTTATTCTTTATGGTAAAGGGGATTTCAGTGTTTCTTTGTCAAGCCTATTTTTAAGAAACCACTTTCAC--------AGCTTTTACAAGAAAATGTCACTGTGCCTCTGGTGCAGGCAAGGGGGAATCTAATTTCATTACAGTTAAGTGCCTGACTCCCCATTACCCTCCATAATAGTGTAACATGGTATATTATAGGACTTTAATAAATAGGAAGGATGTGGGTTGCAGCACATTTTAGTAGAAAC-CAAATTACTTTGGGCCACACATCTGCCTCCTCAG----TTCATCCTATTTGCCACTGTTTC----ACAACCTAATTAC---AGGATTTTCTGGAAATTGCTGTCCAGCAGTAACTGGATGACCTGCTTTATGTGGCCGAGACAGGCAGCTCCACCGACTTCAGTCTTCATCACTGTCACCATGTAATTGCATTGGACTTCCATGTTAATCCCTGAAGGCGGGAAGCAAATGAAATATTATAATTACCTTTTATTCCCTTGCCCCTGAAGCCTGGAT-TAGGGCAGTGTGCATCCAAAGGAAAGAAGTGGGG-ACTGCTTCTAAGAGTATTAGCGATGGTCTGATCAAAAGCTGAGGAT--GGTCTCATCTTCAGCTTTTGGCCTGAACACGGGCCACATCATTAAAGCCCTATGTCTCATCCACTTAGCAAAGTGTGTGGCCCCCATCTGTTTAATGCAGGATCACTATGAGACACGTTGGAAAGATCCTGGAAAAAAGGCCTATTTTATCAATATGTATGTGCAAGGCATTGGAATTTGAAAAGACTTATCTGAAGGAA--AGGGATAGGTGAACTAAACT chr4 + 94230402 44569950 44569949 44570868 44569950 44569949 44570868 919 TAATAACACAGGAAGGTTCATTTCCCTGAGTTTCCATAGCCCTGCCTGCCCATCGTTACAACAGCATCAAATTAAAAACATACGCTGTTGTGGGACAATGAAGTGCTCTACCTCATCAGCTTTCAGTTCCTACATCCCTTACTGTGAAGTGGTTTCCAGTGTTCTTCTGTCAGTTCAGTTTCTGCAAAACTACTTTCACTGTTTCGTGGATTTTAGAAGAAAATATTCTTGTGCCTCTGGCGCAG--ATGGAAAAATCCAACTTCATTATAGATCCATGC----CTCCCCGCTAGCTTTCCTAGTAGCATAGCATAGCAAATTACGGATCCTTAATAATTAGCAAGGATGAATTTTGGAATCCATTTC--CAGAATCTCACCATATCTTTGTCTGCATACTTGGCTCTTCAGGCATTTGATTTTGATTG---TTGTTTCTGATGCCTTCTTGTTGCATGAGAATGTTTTTGAAGATGTTCACCAGTAGCAAACGCATGGCCTGCCTTTCGAAGCAATGGCATGAGGCTACATGTGCT---GTCTTCTTTTGTAACACTGTGCAATCATTTCAGGCTTCTGCATTAACCACTAAA-----GATGTAAATGAAATATTACAACTGCCTTTTGTCCCCATTCCCT----GCCTGAATCTGAAACAGT-TGCATGTGCAAGGGTAGAGTGGGGCACT--TGCTGACAGTACTTCTGAAGGGCTGATCAAAGCAATAATATTCAGCCACGTTCCCATTCTGTGGCA-GATCACAGGCCAAATCAT---AACTGTGTATCTCATCCTCTTAGCAAATTGTGAGGGTTCCATCTGGTTGCGTCAGG-TCACCAT-ATGCA-GTTTGTGGGACCCTGGAGAGCA-GCTGGTTCCATC------CATGTGGGAATCAGTGGTACCTTAAAAGATTTTGCC-AAGGAATTGGGGGTGGGTTATTGGAACT .:....x...x...........xx.:xx:.....:.:xx::...:...x.:----..........x...........:..x:.:xx::x:x....:...:.....::.x.................:.::.x:..:.:...:x..:...x..x..:.......::.:.....:x:.x:...:.:x:....:........--------:.x.....x........:.:x:...........:....--.x..:::....:..:.......:..x.xx:...----......::..x.:.:.x..:...::..:...:.:.x....::.:x.:.......x...x.......x:xx...x.::x.....:--:....x.-..xxx..::..x.x.::..:.::..x...:....----..x..::.:x...---:......----:.xx:..x:..:.---..:..x..:.x...:x..:.xx....:..:..x:.x...:.....:..x:.x:..x:x.:..x.x:...x..:xx:..---......x.:xx.:x...::..:...:::x.::.:....::::....:.x..:..-----..x.:.............:..:.:......:.:...x.x...:----.....:..-.::::....-.....x::x.:.::x::.......-...--.x..:.x....:.xx:..x..x.........:xxxx.:x..--:.:.x.:.:::..x::.x....x-..x...:.....x.....---.:.:x.:.:........x.........x....x..x::.......x..:xxx....-....:..-.x:..-...x.x::..:......:.:x.-..:x:..::...------:.....x:.:x..x...x.::.x......:..xx.:-......--:...:.:...x.x:x:.... 51M4I144M8I38M2D33M4D84M2D7M1I34M4I13M3D7M4I13M3I78M3D54M5D43M4D8M1I9M1D24M1I3M2D41M2I23M1D18M3D56M1D7M1D5M1D22M1D12M6D36M1D6M2I20M 586/889 65.9% 919/94230402 0.0% 71/889 8.0% 128286658 61927897 +3410 chr4 + 190214555 172862560 172862559 172862642 83 CATGGTGGCATGCACTTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCCTGGAGGTGGAGGTTGCGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--.....x......:.........::::........x.xx:x...x.:.........x.:..x.xx:..:..::. 8M2D73M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 96829363 93385192 +3184 chr4 + 190214555 172871757 172871756 172871830 74 TTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGGGGTTTTTTTGGTGATGGAGTTTCGCTCTTTCACCCAGGT chr4 + 94230402 34676469 34676468 34676541 34676469 34676468 34676541 73 TTTTGTGTTGGTGGGTTTGTTTGTTTGTTTTGTGGGGTTTTTTTTTTGCTTGC-TTTAGGTTTTTTTCCTAAGT ....x....x..xx.................x............xx..x.x.x-...x.x.:...:x..:.:.. 53M1D20M 56/73 76.7% 73/94230402 0.0% 1/73 1.4% 138195288 52019267 +10435 chr4 + 190214555 172882758 172882757 172882914 157 GTCCTTTAAAGATTATTTTGTTCATTTCACAGGTCTCCTGTTATGGCTGGAGGTCTCTTTGCTGTGGATCGGAAATGGTTTTGGGAATTGGGTGGCTATGATCCAGGTTTAGAAATCTGGGGAGGAGAACAGTATGAAATCTCTTTTAAGGTAAGCC chr4 + 94230402 44580076 44580075 44580232 44580076 44580075 44580232 157 GTCATTTACTGTTCATTTCACTCACTCTTCAGGTCTCCTGTGATGGCTGGAGGTCTATTTGCCGTTAACCGGAAGTGGTTTTGGGAGCTGGGAGGCTACGATCCAGGATTAGAAATATGGGGAGGAGAGCAGTATGAAATCTCCTTTAAGGTAAGTC ...x....xx.x.:....:::...:.::x............x..............x.....:..x:.:.....:...........::....x.....:........x........x...........:..............:...........:. 157M 129/157 82.2% 157/94230402 0.0% 0/157 0.0% 128302682 61911873 +5868 chr4 + 190214555 172882772 172882771 172882911 140 ATTTTGTTCATTTCACAGGTCTCCTGTTATGGCTGGAGGTCTCTTTGCTGTGGATCGGAAATGGTTTTGGGAATTGGGTGGCTATGATCCAGGTTTAGAAATCTGGGGAGGAGAACAGTATGAAATCTCTTTTAAGGTAA chr4 + 94230402 44721950 44721949 44722089 44721950 44721949 44722089 140 ACTGTATTCTTCTTCCAGGTCCCCCGCCATGGCTGGTGGATTGTTTGCCATTGAACGTGATTTCTTTTTTGAACTGGGTCTCTATGATCCAGGCCTTCAGATCTGGGGTGGTGAAAATTTTGAAATTTCTTACAAGGTAA .:.x.:...x.:.:x......:..:.::........x..x:.x.....::.x..x..x:.x.xx....xx...:.....xx............::.xx.:........x..x...x.x.x......:....x:....... 140M 98/140 70.0% 140/94230402 0.0% 0/140 0.0% 128160822 62053733 +3039 chr4 + 190214555 172892603 172892602 172892649 47 TTCTTTTTTTTTTTTTTTTTAACTGCTGCATATGCCCTTACACCTTT chr4 + 94230402 65600197 65600196 65600243 65600197 65600196 65600243 47 TCCTTTTTTTTTTTTTTTTTAGCTTTCCCATCTGCCCTTACAACTTT .:...................:..x::x...x..........x.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 107292406 82922149 +3411 chr4 + 190214555 172902986 172902985 172903109 124 GGAATATATTTTATTCCCACATTCACCATAATAATTCAAGACATAGCCAATAGCTTTTTCAATAGCCTTACCTTGTCTAATCTTTCTCCTCTTTTAATCTACCCAACA--TTTCATTATTTTTTCC chr4 + 94230402 17051936 17051935 17052061 17051936 17051935 17052061 126 GAAATATTTTTGACCTCTGCATTTGCAATAAAATTTCCAGCAATAACCTTTTTCTTTTTTTTTCTCTTCCCTTGATCTAATTTCCCTCCTCTCTTAAATTCACCAGCACTTTTCTTTGCTGTCTCC .:.....x...x.:::.::....::.x....x.x...x..xx...:..xx.xx......:xx.xx.:.:x.:.x:......:.::.......:....x:.xx...:..--....x..::.x.:... 108M2I16M 78/124 62.9% 126/94230402 0.0% 2/124 1.6% 155851050 34363505 +13390 chr4 + 190214555 172911539 172911538 172911865 327 TTTCCTACAGTATTTAGCCTAGATGACATTAAAATATCCATTTTAGTT-CAACATGCCCAGAATTGATCTTCCAAAGAAAATATTAAAA-TGACTCTAAACTCATTCAGAAACTCAAAGATAAACAGAAACAGCTGCTAAATGTCTCACCAGCCAGTCTGAGATTCATTTCAATTACCCAACAAAAGATACCTCAGGTGTATCAGAGCACTTTCAAGTTAAATTTTATGTCTATTAGATATAAGCCTAGGGGCAATTATGAATTCCTTCCAGTTGTTCCTTCCTT--TATGTCTAAT--GGCATTTTCCTAATTCCCTGTTTAATTTTATTTT chr4 + 94230402 44587290 44587289 44587614 44587290 44587289 44587614 325 TTTCCT---GTATTCAGTGCAGGTGACACAAAAATGCACATTTTAAAGACAGAGTTGCCAGAATTGATCTTCCCAGGAAAATATAAAAAACGCCTTTAAAACCATTCTGAAGCTGAAAGATAAACAGGAACAGCTGCTAAATTTCCTTCAAGGCAGCCCAAGATTCATTTCAATTACCCTACACAGAGCACCTCAGGTGCAGCACAGCATTTTCAAG-----TTTTATGTCTATCAAATATAAACCTAACACAAAGTGTTATTTCCTCCCACTTGTTATTGCCTCAGCATACCTGGTGGGGTTTTTTTCTCAATCttttttttcttttctttt ......---.....:..:x:..:.....:x.....::x.......:xx-..:x:.xx................x.:........x....-:.x..:....x:.....x...:..x............:..............x..::x.x..x...:.::...................x...x.::::..........:.x..x....:.......-----............:.:......:....:x:xx..x.:.x.x.....:...x.....x:.x...:--:..::..::.--..:x....:..x.x..::.x...xx....x.... 6M3D39M1I40M1I127M5D63M2I10M2I34M 236/319 74.0% 325/94230402 0.0% 14/319 4.4% 128324249 61890306 +8870 chr4 + 190214555 172931137 172931136 172931278 142 TTTGTTCTATTTTTCCCTCTTCAGGTTTGGATGTGTGGAGGAGAAATGTTTGATGTTCCATGTTCTAGAGTTGGTCATATCTACAGGAAGTACGTTCCATACAAAGTTCCATCTGGGACAAGCCTGGCAAGAGTGAGTAACT chr4 + 94230402 44599562 44599561 44599702 44599562 44599561 44599702 141 TTTGCTTTCTGTCTCCCT-TCCAGGTGTGGATGTGTGGAGGTGGCATGTTCGATGTTCCATGCTCTAGAGTTGGGCATATCTACAGGAAGTATGTCCCTTATAAAGTTCCTTCTGGAACCAGCCTAGCGCGTGTGAGTAATT ....:.:.x.x.:.....-.:.....x..............x.:x.....:...........:...........x.................:..:..x..:........x.....:..x.....:..:x.x........:. 18M1D123M 116/141 82.3% 141/94230402 0.0% 1/141 0.7% 128331575 61882980 +3273 chr4 + 190214555 172939166 172939165 172939238 73 TGTGCCTATAGTCCCAGCTACTTGAGAGGCTGAGAAGAGAGGATTACTTGAGCCCGGGAAGTCAAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x.:....:............:........xxxx.x.:.x:......:...:.:.:x.:x:.....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 96905961 93308594 +3774 chr4 + 190214555 172944918 172944917 172945000 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGATCCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:...........::........x.xx.x...x.......x.....:..x.xx:..:..:.. 8M2D73M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 96911721 93302834 +3277 chr4 + 190214555 172948433 172948432 172948488 56 TCTTTTTGCTGTTGTTGTTGCTGTTTTGTTTTTCTTTGAGACAGAGTTTTGCTTTT chr4 + 94230402 39188523 39188522 39188578 39188523 39188522 39188578 56 TTTTTTTGTTGTTGTTGTTTCTGGGTTGTTTTTTTCTGAAACAGAGACCTGTTCTT .:......:..........x...xx........:.:...:......x::..:.:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 133759910 56454645 +3609 chr4 + 190214555 172949888 172949887 172949986 99 AACACAGTGAGACTCTGTCTCAAAAAAAAAAAAGAAAAAAAGAAAGAAAAGAAAAAGAAAAAAGAAAGAAAGAAAAGAAAAG-AAAATGTGGCCTGAGGA chr4 + 94230402 38128952 38128951 38129051 38128952 38128951 38129051 100 AACACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAATGGCAAAATATACCCTATGGA ......:.:...::x...:.::x..xx.:.....:x..x..:..x::.........:x...:.:.......:x..:...x:.-.....:.:x...:x... 82M1I17M 66/99 66.7% 100/94230402 0.0% 1/99 1.0% 134820936 55393619 +18465 chr4 + 190214555 172952004 172952003 172952266 263 AATAAATGACATTTTTGTTTTC-CTGCTGCACAGAACCTGAAGCGGGTAGCTGAGACCTGGATGGATGAATTTGCCGAGTACATTTACCAGCGGCGGCCGGAGTACAGGCATCTCTCCACGGGGGACATCTCTGCCCAGAAGGAGCTGCGCAAGCAGCTCAAGTGCAAGGACTTCAAATGGTTCATGGCTGCTGTGGCCTGGGACGTGCCTAAATACTACCCTCCAGTGGAGCCCCCGCCTGCTGCCTGGGGGGAGGTGAGGAA chr4 + 94230402 44611260 44611259 44611523 44611260 44611259 44611523 264 AAAGAATAATATTTGTGTTTTTTCTGCTGCACAGAACCTGAAGCGTGTGGCGGAGACATGGATGGATGAGTTTGCAGAGTACATTTACCAGCGACGGCCTGAGTACAGACATCTCTCGACTGGTGACATCTCCGCCCAGAAGGAACTTCGCAAGCACCTGAAATGTAAAGATTTCAAGTGGTTCATGGCTGCAGTGGCTTGGGATGTCCCCAAATATTACCCACCTGTGGAGCCTCCACCTGCTGCCTGGGGGGAGGTGAGGAA ..x:...:.:....x......:-......................x..:..x.....x...........:.....x.................:.....x........:........x..x..x........:...........:..x........x..x..:..:..:..:.....:..............x.....:.....:..x..:.....:.....x..x........:..:.......................... 22M1I241M 225/263 85.6% 264/94230402 0.0% 1/263 0.4% 128340744 61873811 +3543 chr4 + 190214555 173002254 173002253 173002370 117 GTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGCGGAATCACTTGAACCCAG-------GAGGTGGAGAGTACAGTG--AGCCAAGATTGTGCC-----ACTGCACTCCAGCCTGGTGAC chr4 + 94230402 76033201 76033200 76033328 76033201 76033200 76033328 128 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTC-CCAGCATGGTGAC .........:--......:.........::::........x.xxxx...x.............-------.:.x..x...::.:::..--.:x..::xx......-----x....x.-.....x....... 10M2D51M7I18M2I15M5I7M1D13M 85/114 74.6% 128/94230402 0.0% 17/114 14.9% 96969053 93245502 +3969 chr4 + 190214555 173002655 173002654 173002737 83 CGTGGTGGTGCACACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--...:..:...........::........x.xx.x...x.............:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 96969458 93245097 +8752 chr4 + 190214555 173009174 173009173 173009336 163 ACAGATCCGAAATGTGGCAGCAAATCTCTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAAAGAACATGGTCTCATGAACAGGTG-AGTCACCTCCCAGAAGCCAGGGCAGTGGGAACCAGTCGG chr4 + 94230402 44620305 44620304 44620468 44620305 44620304 44620468 164 ACAGATTCGAAATGTGGCAGCCAATCTCTGCGTGGACAGCAAACACGGAGCCACGGGGACTGAACTGAGGCTAGACATTTGTGTGAAGGATGGCTCAGAACGGACGTGGTCACACGAACAGGTATTGTAACAGCTAAAAGAAAAAAGCAGTGTAAAATTGTTGG ......:..............x........:...........:..:........x..:..x..:........:.....:.....x........:..x...x.:..:.....x..:........:-x..x..xx.:x.:.::xx.::......x:..x:x..:.. 124M1I39M 124/163 76.1% 164/94230402 0.0% 1/163 0.6% 128388869 61825686 +3448 chr4 + 190214555 173020942 173020941 173021015 74 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGATGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........:.::........x.xx.x...x.:........::.:..x.xx:..x..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 96987738 93226817 +11650 chr4 + 190214555 173021465 173021464 173021690 226 TGCTTTGCTAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTTGATGCGATCTCACACAACAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGTAAGAGTCAGTCCACTGTGGTCATTCTCAAATTACTGTGGTTTAAGTTATTCT-------TACTCAGTTTT chr4 + 94230402 44626194 44626193 44626414 44626194 44626193 44626414 221 TGTTTTTCTAGCTGTTCACTTTTGGCTGGAGAGAAGACATCCGTCCCGGGGAGCCACTTCACACCAGGAAGTTCTGCTTCGATGCCATCTCTCACAGTAGCCCTGTCACACTGTATGACTGTCACGGGATGAAGGGGAACCAGCTCTGGAGCTATAGGAAGGTCGGAGTCACTCTG----GGTCATT-TCAGA-------GGTTCAGGCTGTCTTGAGCCTATACTCATTTTT ..:...x......x..:..:.....x...........:..:..x.....x........x..:...x....:........:.....x.....x....::.....:..:.....x...........:..x.....................:.x..:x.......x:......x..::----.......-...:.-------....:.:.:.:.::.-------......x.... 176M4D7M1D5M7D15M7I11M 173/214 80.8% 221/94230402 0.0% 19/214 8.9% 128395271 61819284 +6842 chr4 + 190214555 173022034 173022033 173022227 194 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGG---------AAGGAAAGAAGGAAGGAAG--GAAGGAAAGAAGGAAGGAAAAGAGAGAGAGAAGGCAGGAAGGCAGGAAGGGAGAGAGGGAGGGAGGGAGGAAGGAA-----GGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 1500702 1500701 1500907 1500702 1500701 1500907 206 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaag--aggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaag--aggaag .....::.:...:.:x..::.....:.:x..:..:.:.:.....::..:x.:.:....:..:..x:::..---------::....x:..........:--.:.::...:..:...:.....x:..:.x.....--.....::x...::...:...::.::.:::....::..:...-----:...:.....::.:.......--...... 70M9I19M2I33M2D41M5I21M2D6M 127/190 66.8% 206/94230402 0.0% 20/190 10.5% 171521332 18693223 +6307 chr4 + 190214555 173022054 173022053 173022227 174 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAGGAA-----------------GGAAGGAAGGAAAGAA---GGAAGGAAAAGAGAGAGAGAAGG------CAGGAAGGCAGGAAGGGAGAGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 + 94230402 1500702 1500701 1500901 1500702 1500701 1500901 200 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaag .....::.:...:.:x..::.....:.:x..:..:...:.....::..:x.:.:....:..:..-----------------....x:......:...---....::....:...:...:..x.------x.:..:.:x.::.:...:.:.::....:.:::.:....::...:..:x:::...:.....::.:....... 64M17I16M3I23M6I71M 114/174 65.5% 200/94230402 0.0% 26/174 14.9% 171521352 18693203 +3704 chr4 + 190214555 173030862 173030861 173030956 95 CATAGTGGCACAGACCTGTGGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGGATCACATGAACCTGGAAGGACTAGGCTACAGTGAGTCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCA ..:.....::..--.x...:..:.......:...::........x.xx.x.:.x...x......::....xx:.:....::..x:x:.x...... 12M2D81M 64/93 68.8% 93/94230402 0.0% 2/93 2.2% 96997665 93216890 +31594 chr4 + 190214555 173039903 173039902 173040618 716 AGTCTTTTCTTTTCTTCCTCACTCCTCCAGGACAGAACATTATTCCATCCTGTGAGCAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGAACACATTAATATGACTGTTTTAGAAAAATTTAACCACCATGCCAACTCCTAGAAAGAAGAAAGGAAGAAAGA---GTGATTACCTACAGGTTATAAATTAAATTTTAGCCAGCATCTGGGTCGAAGGAGTCAGGAATAACATTTCCTCGATCCAGGAAGGCTGGTTTAAAAATT-TGCAAATGCCATGTCAA-----AGTAGGTTGTTTTGAAGAACTTCCTGCATCTGAAGAACTTGGCTGAGAATCTCACCAGCTGCTTCTGAGAACTCGAGACTAGCAGTTCCCTTGCTGGCCAAGGGCAAAGATAATTTAGGGACTTTTCAAAACAACTGCTGAGCTAAT-----------AAATCCTAGCATTTCTCAGGTCAAATCCTGCAGTAGTGAGTAGCTATGAATGGATCCTATTAACTGGGTGGGAGGGGGGTGAAAATGGAGTGCATGACTGCTCTGACAACCTGAGGATATCACAGG-TTTAGAACTAGCCAAGCTTAAGG----------------------------GGTGAGCTGTACTCTTTGGTGCCATTCTCTGACTAAGAA--TGGGTTCAGCAGGTTTAACCCTTAAAAGTGCTGCAGATGATTTCAGA chr4 + 94230402 44631886 44631885 44632643 44631886 44631885 44632643 758 AATTCTATTTTTTTTTTTTCATTTCTGTAGGACAAAACTTTGTTCCATCCGGTAAGCAGCAGCTGCATAGATTGCAACCCATCTGAAAAGAAGATTTTCATGAACAGATGTGATCCTTTATCTGAGACTCAACAGTGGGTTTTTGAACATATTAATATGACTGTTTTAGAAAAATTTAACAGCAAGGCCAGTTCCTAGGGAAAGCAAAAAGATGAACACACCCAGTCGCACACAGCCTGCAGACTACGTTTTCGCCAGCATCTGGGTCGAAGGAGTCAGGAATTAAATTTCCTAGATCCAGGAAGTCTGTTCTAAGGATTAAGAAAATGCCCCAGCAAGAACCAGCAGGCTGTCCTTGAGGATGTACAGTATCTGAAGAACTTGGCTAGGAGCCTCACCGGATGCTGCTGAGAACTTCAGGCTGAAAATTCCCTTGCTGGTCAAGGGAAAATTTTGTTTAAAAACTGTTTAAAAGTACT-CCAAGTTAATAAAGTAAAACAAAACTCTAGAGTTTCTCAGGTCTAATCCTGCTGTAGCGAGTAGTTCAGAACAGACGCTGTGATTTGGGACGG--------GTATATGGTGTGCATGACAGCTACAGGAACCTGAAGAAATCCCAGGTTTTAGAACTAAACATGCTGGTGGAAGAATAATGATGTCCCAGCACTCCCTAGACAAGATATATGCTCTGTTGATATTCTCATAATAAAAGGTCGGGTTAAGCAGGTTTAACCCTCAGAACTGCTGCAATTAATTTTAAA .:.::.x.:....:..::...:.:..x:......:...x..:........x..:....:.........:...........xx.x..:...............:x.........:...:.x...........:......:..........:..............................x:.x.x....::......::.:.:x...:::.x:..x.---x:::.::.x:....x:.::.:.:..x:....x..............................x.x.......x...........x...x.:...::...-x.x.......x::x...-----..:...:...::.x:..:.:x.x.x.:.................::..::......:.x....x.........:x..:..::x.:............:......x...xx.x:....:::...x..:....xx...-.::..:....-----------...::....x:...........x........x....:......:.xx...::..:x..:.x.x:....xx..--------.x.x....x.........x...x:::x.......:..x...x....-..........:x..x...x:x..----------------------------.:::..x.:..:x..:..x..x:......xx.x...:.:--:.....x...............:.:..x.......:x.:....:.:. 218M3I99M1I17M5I136M1D10M11I72M8D46M1I23M28I39M2I47M 522/707 73.8% 758/94230402 0.0% 60/707 8.5% 128408017 61806538 +3674 chr4 + 190214555 173045146 173045145 173045219 74 GTGCACCTGTAGTCCCAGCTACTAGGGAGGCTGAAGCAGGAGAATCATTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........x.::.......:x.xx.x...x..:..........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 97011942 93202613 +3077 chr4 + 190214555 173061832 173061831 173061926 95 CATTGTCTATTCATGTCCTTTGCCCACTTTCTGATGGGATTTTTTGTTTTTTATTTTGTTTTTTGTTTTTGTTT----------TTGTTTTGCTGATTTTTGAGT chr4 + 94230402 25288586 25288585 25288689 25288586 25288585 25288689 104 CAGTGCTTAATTATGATATTTGTTCAGCAACTGATGGGGTTTTTTTGTTGTTGTTTTGTTTTGTATTTTTATGTAACTTCTTAATTGTTTAG-TGTTTTTTGTGT ..x..::..x.:...x:x....::..x:xx........:......xx..x..:.........x.:.....:.x.----------......x.-..x......x.. 74M10I8M1D12M 68/94 72.3% 104/94230402 0.0% 11/94 11.7% 147773246 42441309 +4600 chr4 + 190214555 173096907 173096906 173097014 108 GACCCTAAGCAAATTACTTAAGCTCTCTGTGCTTCAGTTCCCTCATTATTAAAATGGATATAATAATAA-TGCTTACTTCATTGGGTTGTTGGAAGGATTAAATGAATT chr4 + 94230402 83501141 83501140 83501248 83501141 83501140 83501248 108 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGG-CTAAATCAATT ...:..::.............x..x.x.....:......::.:..::xx.........xx.:...:...-.:.:...:...:x...x.:...x:...-:.....x.... 69M1I27M1D11M 78/107 72.9% 108/94230402 0.0% 2/107 1.9% 89595766 NA +3263 chr4 + 190214555 173100238 173100237 173100357 120 AAAGAGGGAGTCAAGGAGAGAGAGAGAGAAAGAAAGAGAGAGGCAGAGAGAGAGAGAGGAAGAGACAGAGGCAAAAGGAAAGTCAAAGAGAGAGAGAAAAAGTCAAAGAGAGAAAGAAAG chr4 + 94230402 51148381 51148380 51148500 51148381 51148380 51148500 120 AAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGG .....:.:..::.x:....................x...::xx....:xx::.:x.:::x.x:..x:.x.:x.:..::...:xx...::...:..x.:x.xx.::...x:x...:...:. 120M 70/120 58.3% 120/94230402 0.0% 0/120 0.0% 121951857 68262698 +3108 chr4 + 190214555 173127301 173127300 173127375 75 TTCTTTCCCTTTTTTCTCTTCCTTTCTCTCCCTTTCCCTTTCCCTTTCCCTGGCTG----ATCTCAAACTCCCGGGCTC chr4 + 94230402 12085024 12085023 12085102 12085024 12085023 12085102 79 TTCCTTCTGTTGTTTCACTTCCTCTCTCTCCCTCTTTCTCTCCCCCCTCCTCACTGGTGTACTTTGAATCCCTGAACTC ...:...:x..x....x......:.........:.::..:....::::...x:...----.::.::..::..:.::... 56M4I19M 50/75 66.7% 79/94230402 0.0% 4/75 5.3% 161042277 29172278 +3837 chr4 + 190214555 173138152 173138151 173138223 72 GCGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:.........:..:........x.xx.x...x.............:..x.xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 97104946 93109609 +3786 chr4 + 190214555 173148074 173148073 173148163 90 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCAGTGAGCCGACACGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x....:.:...........::........x.xx.x...x::...........:..x.xx:..:..:..------:...:.:..... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 97114868 93099687 +3462 chr4 + 190214555 173157693 173157692 173157776 84 ATGTGGTATATATATATA-----TATGTGGTGTATATATATGTGGTGTATATATATGTGGTGTATACACACACACACGCACACACACAC chr4 + 94230402 73857025 73857024 73857110 73857025 73857024 73857110 86 ATACAGTGAATATTTATAGTGAATATGTGA---ATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCAC ..:::..:x....x....-----......:---......:...::.:......x...::x.:.........::....:....:..x... 18M5I7M3D56M 60/81 74.1% 86/94230402 0.0% 8/81 9.9% 99300668 90913887 +3728 chr4 + 190214555 173159143 173159142 173159225 83 CATGATGGAGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::...x...:.--....:.:...........::........x.xx.x...x...........:....x:xx:..:..:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 97125946 93088609 +3216 chr4 + 190214555 173167446 173167445 173167516 71 GTGCACTTGTAGTCCCAGCTACGGGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGAGAGGTGGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x......:........xx.::........x.xx.x...x::.........:::..x.xx:..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 97134242 93080313 +3054 chr4 + 190214555 173167580 173167579 173167650 71 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAACCCCAAAAAACTT chr4 + 94230402 67596939 67596938 67597009 67596939 67596938 67597009 71 TCTCAAAAAAAAAAAAAAAAAACCCAACAGAAAAAAAGCCAACCGAAACCAAAACCAAAACCAAGTAACTT ......................xxx..x.:.......:xx..xx....xx....xx..xx....:x..... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 105570641 84643914 +3196 chr4 + 190214555 173178006 173178005 173178083 78 TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACGCGCGTGCGCACAGACACCTATG chr4 + 94230402 85834539 85834538 85834616 85834539 85834538 85834616 78 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .:.....x.................:.xx:...:x.::.:::.:...:x:::..:.:x::...:....x....x:... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 87343467 NA +3305 chr4 + 190214555 173178021 173178020 173178091 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACGCGCGTGCGCACAGACACCTATGTATATATA chr4 + 94230402 79265519 79265518 79265589 79265519 79265518 79265589 71 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA .............::........xx...:.:.:.:::....:.:.::.:.:..:...:x.x...:.x:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 93912502 NA +3244 chr4 + 190214555 173178023 173178022 173178088 66 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACGCGCGTGCGCACAGACACCTATGTATAT chr4 + 94230402 79265519 79265518 79265584 79265519 79265518 79265584 66 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGT .............::........xx...:.:::.::..:..:....:...:x.x..x...x.:.:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 93912504 NA +4263 chr4 + 190214555 173181023 173181022 173181226 204 TTAAAAATCCATTAGATTTTTGGCAAATAAGCTCTCAATTATGGTACAGAATAAATGACTACAAAGTGCTTTTTAGAGTAATGGAATAGAAATGACTGAAA-----------TTTTATTACTT-----TACACATGCAGATTTTTCTACTGTGGTAGATGTTCTTAAACTAAAAGATTACTGTCAAGATTGGAA--ATTTTTATCACTTAAAATATATAATT chr4 + 94230402 44670345 44670344 44670547 44670345 44670344 44670547 203 TTAAAAAT---GAAGTCTTTTGTCAAAT--GCTTCTAGTTATGTTACAGAATAAATGACCACAAAGTGGTTTTTTGAATAATGTGA-AGAAATGAAGAAAGCCCTACATGGTTTCTACAATTTGGGTATACATACACAGACTGTATTA-------AAACTTTCCTGAACT------TTATTTTTGTCATTGGAATCACTGCTAATAAGTTAAGTAAATAACT ........---xx..x:.....x.....--...:::.:.....x...............:........x.....x..:.....x:.-........xx:..:-----------..:..:x.:..-----....:.::....:.x.x:..-------.:.:x...:.:....------...:.x.::xx.......--.:.x:..x:.xx.x..:..x....:. 8M3D17M2D56M1D14M11I11M5I20M7D15M6D18M2I26M 132/185 71.4% 203/94230402 0.0% 37/185 20.0% 128510678 61703877 +3017 chr4 + 190214555 173216707 173216706 173216745 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 148424081 41790474 +28751 chr4 + 190214555 173247973 173247972 173248447 475 TGTATAGGAAGACAGAGATGTCAATGACCCCATGCCCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAGATTCAAACCTGTGGTACCATGGCCTCATGTTGAAGGAGTAGAAGTGGACTTAGAGTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCC---CAGAAAGATATCATGCAGAGGCAGTATCTCACATTTAAGCCTCAGACATTCACCTACCATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAGCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGTGACATGATCTCACTGGACCGCAGCGTCAATGACTTACGCCAAGAAGAGTAAGCA chr4 + 94230402 44695661 44695660 44696132 44695661 44695660 44696132 472 TATATAGGATGACAAAGAAGCCAACAGACCCTTGCCAAACAAAGGAGAGCATGGACTAG------GAAATGAGAAGTTCAAACCTGTGGTACCTTGGCCTCATGTTGAAGGTGTGGAAGTGGACTTGGAATCCATTCGAAGGAAAAATAAGGCCAAAAATGAATTAAATCAGCATGGTGGTGGTGATAACAATCAGCAAAACATCATCCAGAGGCAGTATCTCACATTTAAGCCTCAGACATTTGTATATCGAGATCCTGTTTTACGACCTGGAGTCCTCGGTAATTTTGAACCCAAAGAGCCTGAGCCTCATGGAGTTGTTGGTGGCCCTGGAGAGGAAGCGAAGCCATATGTTTTAGGACCAGATTACAAAGAATCCGTTCAAGCCAGCATAAAAGAGTTTGGGTTTAATATGGTGGCAAGTGATATGATCTCACTAGATCGGAGTGTTAATGACTTGCGTCAAGAAGAGTAAGCA .:.......x....:...x.:...:::x...x....x...x:...x.:xx.........------.::.x..x.::.................x.................x..:...........:..:..:...x....:.x...:...............:x.:.x..x....x...x..x...xx.---...x..:.:.....x...................................:::x..:.:x........x:.x..x..x..::..........:..............:..........x......x..................:....x.......xx.....:........x.x....x..x.x:.............x...........:.....:..............:...........:..:..x..:..:........:..:............... 59M6D125M3I285M 382/469 81.4% 472/94230402 0.0% 9/469 1.9% 128552312 61662243 +3126 chr4 + 190214555 173266233 173266232 173266290 58 CTGGGCAACAAAG---CAAGACTCTGTCTCAAAAAGGAAAAAGAAAAAGAAAAGAAAAGAA chr4 + 94230402 88382701 88382700 88382761 88382701 88382700 88382761 61 CTGAGCAGCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ...:...:.....---......xx:x............:...:.....:.....x.x.... 13M3I45M 47/58 81.0% 61/94230402 0.0% 3/58 5.2% 84883532 NA +3031 chr4 + 190214555 173288260 173288259 173288313 54 GCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ..:.x:....:....xx.x.........::.:...............x.x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 84905552 NA +12562 chr4 + 190214555 173292031 173292030 173292277 247 TCAGCAAATATAGTCAGCTTGGAGCCAAGCAGTATAGATTAC-CTGT--AAATAAATATGATGAAATTTTCTCTTTACAGATGCAAGTATTGGCATTATGATGAAAACTTGCTCACTTCGAGCGTTGTCATTGTCTTCCATAATGAAGGATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCAAGGAAATATTTAGCAGAAATTGTGTTAATTGACGATTTCAGTAATAAAGGTA chr4 + 94230402 44711809 44711808 44712052 44711809 44711808 44712052 244 TCAGCAAAGAT-GTACGCGTGGAA--AGATGTTGTACATCACATTGTCAAAGCCAATGCAGTGAA---CTCTTTTCACAGGTGCAAACACTGGCATTATGATGAAAACCTGCTCACCTCCAGCGTCGTCATTGTCTTCCATAACGAAGGGTGGTCCACGCTGATGAGGACGGTTCACAGCGTCATTAAGAGAACACCAAGGAAATACTTGGCAGAAATTGTGCTGATCGATGACTTCAGCAACAAAGGTA ........x..-..xx..x....:--.::::x.:..x..:..-:...--..::x...::::....---:...:..:....:.....::.:..................:.......:..x.....:.................:.....:.....x..x..x.....:..:..:.....:..x.....:..:..x...........:..:............:.:..:..:..:.....:..:....... 11M1D12M2D16M1I4M2I16M3D182M 187/241 77.6% 244/94230402 0.0% 9/241 3.7% 128580222 61634333 +15438 chr4 + 190214555 173295378 173295377 173295885 508 ATTGATTTTTC-----TTAACAGAACACTTAAAAGAAAAACTGGATGAATATATTAAGCTGTGGAATGGCCTAGTGAAGGTATTTCGAAATGAAAGAAGGGAAGGTTTAATTCAAGCACGAAGTATTGGTGCTCAGAAGGCTAAACTTGGACAGGTAGGAAGCATTTGATATCTACAATGTCAACATTTTGGGTTTGGTA---ACTAAATCATACACATTTTTAATCATTCTTCAGTTTTTTTAATTGAAATGAGAATGCTGGCTTAAACAGATAACTTATGTGTCAGAATTGACTATAATGCTAATTTTTATTAGCATCTAATTTTAAATTGTGTGTAATATATGATGTAACGTATATGAGGAGTATTCTTTCACCTGCCTCTTT-----TTTTTAAGGTTTTGATATACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGGTAACATTACCTTGCTTTTTTTCTTTCCTGG----TTGAAAGTAAA chr4 + 94230402 44718029 44718028 44718472 44718029 44718028 44718472 444 ATAAATTTTTCGTTATTTGATAGTTCACCTGAAGGAGAGACTGGATGACTACATTAAGCAGTGGAATGGCCTTGTAAAGGTATTTCGAAATGAAAGGAGAGAAGGTTTAATCCAGGCTCGAAGCATTGGAGCCCAGAAGGCTAAGCTTGGACAGGTAGGATCCAACTCACA----------CACAAGTCTTGATTAAATATATACTTAATTTTACAC--CTTTAACCTTTTT---GTTTGTTT----------ATAATGTTA-----------------AGGTGTTTCAATGTAAAATAATATTAATT--------------------AAGTCTTTGTGATATC-------------------ACTCTTCATTTACTTCTCTTTTTCTCTCTTTTGAAGGTTTTGGTTTATCTGGATGCCCATTGTGAGGTGGGAATTAACTGGTACGCGCCACTTATAGCTCCTATCTCCAAGGACAGGTAATGCTCTCTTGTGATTTCTAGTGCTTGGCCTCTTAGAAGCAGA ..x:.......-----..:.:..xx...:.:..:..:.:.........x..:.......x............x..:....................:..:...........:..:..x.....:.....x..:...........:...............xx..x:.x.:.----------..xx.x.:.x.:..x::..---...x...:x.....--:.....:.x..:.---....x...----------.x....:.:-----------------.x....:xx...xx.xx.....::.....--------------------..x.x.x...:....x-------------------.x.x...x..:..:.x:..:...-----....x.........:.x..:..x........:..........x.:..........:..:......:.......:..x..:............:::.x:....:xx...:.xx.x.:...----..::...:.:. 11M5I155M10D19M3I14M2D13M3D8M10D9M17D29M20D16M19D23M5I119M4I11M 322/427 75.4% 444/94230402 0.0% 98/427 23.0% 128577349 61637206 +33264 chr4 + 190214555 173297758 173297757 173298362 605 TTCTTAAAT--------GCTTTTTCATT---TTCTGTAAATGTTTCAGAACTACATGTACTGTGCCTCTAATAGATTACATAGATGGGAATGATTATTCCATTGAACCACAGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTACTATGGAAACGTATTCCTCTAAGCCACAAGGAAAAGGCCAAAAGAAAACATAAAACTGAACCTTATCGGTAAAGA---CTATTACTTTATTTT--CTTATGTTGAATGTTTATCTAAGTTCTTTTTTTTTTC------------TTCCCCATGAACT--------CGTATAAA---TGTGTGGGTCCATACATACGCTTCCATTTGATCTTTGCTGCCATCAACACAATACAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGACAAAAACTGAACCGTATCGGTAATCACTAAATCACTTACATATTTTTCTTTTCTCCAGTTGCTGCTAACCTATTAACCTCTTGC chr4 + 94230402 44719587 44719586 44720227 44719587 44719586 44720227 641 TTCTTAAATTGCATTTTGCTCTTTCTTTCCCTTCTATAAACGTTTCAGAACTACATGTACTGTACCTCTAATAGATTACATAGATGGGAACGATTATTCCATTGAGCCACAGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTGCTATGGAAACGAATTCCATTAAGCCACAAGGAAAAGTCCAAACGAAAACATAAAACTGAGCCTTATCGGTAAAGAGAGCTGTTTATATACTGTGAATTGTAACAAATGAGTGTCTAAAGCCTTTCCTTCTTCCCTCCTCCCTCTTCTCCCACGAATCACGGTTGGCGCACGCATCCTCCGTGGGTCCCTGCGCATAACCACATCC--TCCCCGCCACCATGCGCCACCCGCAGAACCACATGCACTGTGCCGCTTATAGATGTCATAGATGGCGACACTTTTAAGATTGTACCACAAGGGGGTGGTGACGAAGATGGGTTTGCTAGAGGAGCGTGGGATTGGAGTATGCTATGGAAGAGGGTGCCCTTGTCCAAGCGAGAGAAGGAAAAAAGAGAGACAAAAACCGAACCGTATCGGTAAACACTAAATCACTTACACGTTTCTTTTTTCTTAAGTAGATATTGATCCACTAA-ATCTTGC .........--------...:....x..---....:....:......................:..........................:..............:........................................................:...........x.....x:.................x.....x................:...............---..:..xx.x..:.x.--x..:.:x::....xx.:.....:x:....::..:...------------.::....:...::--------..:.::x.---.x:........x.:.::.::x::x...::--..:::..::....xx:.xxxx::........:x...........................:.....:....x.x.:.:...:....x..............:..........x...:x.......:.................x.....:x.......::..x..xxx.:.......::.xx:...:..........:...............x................::...:.:......:x...x.x.::.:.:.:.:...-x...... 9M8I11M3I207M3I15M2I37M12I13M8I8M3I29M2D266M1D7M 482/602 80.1% 641/94230402 0.0% 42/602 7.0% 128578171 61636384 +9137 chr4 + 190214555 173297792 173297791 173298020 229 CAGAACTACATGTACTGTGCCTCTAATAGATTACATAGATGGGAATGATTATTCCATTGAACCACAGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTACTATGGAAACGTATTCCTCTAAGCCACAAGGAAAAGGCCAAAAGAAAACATAAAACTGAACCTTATCGGTAAAGACTA------TTAC-----TTTATTTTCTTATGTTGAATGTTTATCTA chr4 + 94230402 44719978 44719977 44720216 44719978 44719977 44720216 239 CAGAACCACATGCACTGTGCCGCTTATAGATGTCATAGATGGCGACACTTTTAAGATTGTACCACAAGGGGGTGGTGACGAAGATGGGTTTGCTAGAGGAGCGTGGGATTGGAGTATGCTATGGAAGAGGGTGCCCTTGTCCAAGCGAGAGAAGGAAAAAAGAGAGACAAAAACCGAACCGTATCGGTAAACACTAAATCACTTACACGTTTCTTTTTTCTTAAGTAG-ATATTGATCCA ......:.....:........x..x......xx.........x:.::x..x.xxx....x......:x::.....x..:........x.....:.....:..x.....:......x.:........:x.x:.x..::.:xx.x.xx::..:....xx......:.:xxx.....:.....x..........x....------....-----.:.x........x..x.-..:..x...:. 196M6I4M5I17M1D11M 166/228 72.8% 239/94230402 0.0% 12/228 5.3% 128577814 61636741 +7631 chr4 + 190214555 173298084 173298083 173298301 218 TTTGATCTTTGCTGCCATCA---ACACAATACAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGACA-AAAACTGAACCGTATCGGTAA chr4 + 94230402 44719601 44719600 44719821 44719601 44719600 44719821 221 TTTGCTCTTTCTTTCCCTTCTATAAACGTTTCAGAACTACATGTACTGTACCTCTAATAGATTACATAGATGGGAACGATTATTCCATTGAGCCACAGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTGCTATGGAAACGAATTCCATTAAGCCA-CAAGGAAAAGTCCAAACGAAAACATAAAACTGAGCCTTATCGGTAA ....x.....x:.x..x.:x---.x..:x.x......:.:x..:.....:..x..x......xx....:....x...:xx...xxx...:x:..x..:x::.....x...........x.x....x....:..x.....:......x....x........::.x..x:.:.x..x-....::..::xx.x:.x:..:...-........:..x......... 20M3I152M1D24M1I21M 151/217 69.6% 221/94230402 0.0% 5/217 2.3% 128578483 61636072 +3391 chr4 + 190214555 173299715 173299714 173299788 74 GTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTACAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:...........::........x.xx.x...x.:........::.:..x.xx:..:.::.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 97266511 92948044 +3473 chr4 + 190214555 173300977 173300976 173301077 101 CATAAAAAGGTAGCTGGATGTGTTGGTGTGCGCTTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGACTGCTTGAGCCCAGAAGGTCAAGACTGCAG chr4 + 94230402 76033182 76033181 76033277 76033182 76033181 76033277 96 CATGAAAGGAT-----GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:...:.:.-----...::::x.xx....:.x......:.........::::........x:xx.x.:.x::.....:........x.:x:.:...:.. 11M5D85M 63/96 65.6% 96/94230402 0.0% 5/96 5.2% 97267795 92946760 +11919 chr4 + 190214555 173301894 173301893 173302172 279 TTTTGTAAAGGCTTTATAATTTCTTAATGTTTGGCCATCAGTTTTGTCTCTTCTATGCATTTTCAGGCTGTATTCTACAAGGCTTCTTGCCTATTG------GTGAAGGGTTATTGGGGGTTTGTCTGTAATGGTTATTGCAGTGTTTCTTTTTCTTAGGTCCCCAGCCATGGCTGGGGGATTATTTGCCATTGAACGAGAGTTCTTCTTTGAATTGGGTCTCTATGATCCAGGTCTCCAGATTTGGGGTGGTGAAAACTTTGAGATCTCATACAAGGTAACATT chr4 + 94230402 44721819 44721818 44722093 44721819 44721818 44722093 275 TTATGACAAAGCTTTATGATCTTTCAGTGTATTGCCATCAATCTAATCTTTATTATCTGTTATCAG--------CAAATCGCTTCCTTAATTATTGCTTTCTGTGAATGTTCTCTGATTGTTT--TGGCAGGAGCAGTTACACTGTATTCTTCTTCCAGGTCCCCCGCCATGGCTGGTGGATTGTTTGCCATTGAACGTGATTTCTTTTTTGAACTGGGTCTCTATGATCCAGGCCTTCAGATCTGGGGTGGTGAAAATTTTGAAATTTCTTACAAGGTAATATT ..x..xx..:.......:..:.:.:.:...x.x.......:.:.x:...:.x:...x::..x....--------.x.xxx.x:.:...:x:.....------.....x.x.:x:..:xx....--:x.:.:x:.:x:..:..x...x.::..:.:::........x...........x.....:..............x..x.....:......:...................:..:.....:..............:.....:..:..x..........:... 66M8D22M6I21M2D160M 196/269 72.9% 275/94230402 0.0% 16/269 5.9% 128580075 61634480 +5281 chr4 + 190214555 173302040 173302039 173302222 183 TTCTTAGGTCCCCAGCCATGGCTGGGGGATTATTTGCCATTGAACGAGAGTTCTTCTTTGAATTGGGTCTCTATGATCCAGGTCTCCAGATTTGGGGTGGTGAAAACTTTGAGATCTCATACAAGGTAACATTTTATTTCAACAGATGGAATTCTCCAAGTCGTTACTAACTTCTGTGGCTTT chr4 + 94230402 44580101 44580100 44580274 44580101 44580100 44580274 174 TCTTCAGGTCTCCTGTGATGGCTGGAGGTCTATTTGCCGTTAACCGGAAGTGGTTTTGGGAGCTGGGAGGCTACGATCCAGGATTAGAAATATGGGGAGGAGAGCAGTATGAAATCTCCTTTAAGGTAAGTCATCATGTCACCTTATGTATTAC---------TTATTTACTTGTTTGGTTTT .::.:.....:..x.:x........:..x:........:..:.x..::...xx..:.xx..::....xxx...:........x:.xx.:..x.....x..x..:x.x.x...:.....x.x:.......xx:x.:..x...x.xx...x.x.x.---------...:.x....x.x...:... 154M9D20M 115/174 66.1% 174/94230402 0.0% 9/174 5.2% 128721939 61492616 +9569 chr4 + 190214555 173303961 173303960 173304120 160 TGAAACAACTTTCACAACGTGTTTTTCCTTCATAGATATGGCAGTGTGGTGGCAAATTATTATTTGTTCCTTGTTCTCGTGTTGGACATATCTACCGTCTTGAGGGCTGGCAAGGAAATCCTCCGCCCATTTATGTTGGGTCTTCTCCAACTCTGAAGGT chr4 + 94230402 44723729 44723728 44723888 44723729 44723728 44723888 160 TGTATTAATATCTGCATCTTTTCTTGACCTTGTAGATCTGGCAGTGTGGAGGAAAACTGCTGTTTGTCCCTTGTTCTCGTGTTGGACATATCTACCGTCTCCAGGGCTGGCAAGGAAATCCGCCCCCCGTGTATGTTGGGTCTTCTCCTACACTGAAGGT ..x.x:..:x.:::..x.x.x.:..xx.:.::.....x...........x..x...:.::.:.....:................................:x...................x..x...:.x.................x..x........ 160M 127/160 79.4% 160/94230402 0.0% 0/160 0.0% 128580232 61634323 +3165 chr4 + 190214555 173308767 173308766 173308832 66 GTGGTGGGCACCTGCAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......--...x..:.:.:.........::.:........x.xx.x...x.:.........x.:.. 6M2D58M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 97275566 92938989 +5388 chr4 + 190214555 173313937 173313936 173314185 249 ATATATATTTTTTTTTT-----ACAGAATTATGTTAGAGTTGTGGAGGTTTGGTGGGATGAATATAAAGACTACTTCTATGCTAGTCGTCCTGAATCGCAGGCATTACCATA-TGGGGATATATCGGAGCTGAAAAAATTTCGAGAAGATCACAACTGCAAAAGTTTTAAGTGGTTCATGGAAGAAATAGCTTATGATATCACCTCACACTAC---CCTTTGCCACCCAAAAATGTTGACTGGGGAGAAGTAAGTAGT chr4 + 94230402 44611268 44611267 44611524 44611268 44611267 44611524 257 ATATTTGTGTTTTTTCTGCTGCACAGAACCTGAAGCGTGTGGCGGAGACATGGATGGATGAGTTTGCAGAGTACATTTACCAGCGACGGCCTGAGT-ACAGACATCTCTCGACTGGTGACATCTCCGCCCAGAAGGAACTTCGCAAGCACCTGAAATGTAAAGATTTCAAGTGGTTCATGGCTGCAGTGGCTTGGGATGTCCCCAAATATTACCCACCTGTGGAGCCTCCACCTGCTGCCTGGGGGGAGGTGAGGAAT ....x.:.x......:.-----......::xx:xxx.x..x.:....::x...xx......:.x.:x...x...x.:..:xxxx.x..x.....:.-:...:...:x.:xx.-...x..:..x..x.xx.x...::..:....x:.:x.:.xx..x..:...::...:.............xx.x.:.:....:x...:..x..xx.:.:...---...x..xx:..:xx.xx..:..x......:..:..:..x.:. 17M5I74M1D15M1I100M3I42M 155/248 62.5% 257/94230402 0.0% 10/248 4.0% 128702669 61511886 +15718 chr4 + 190214555 173313939 173313938 173314208 270 ATATATTTTTTTTTTACAGAATTATGTTAGAGTTGTGGAGGTTTGGTGGGATGAATATAAAGACTACTTCTATGCTAGTCGTCCTGAATCGCAGGCATTACCATATGGGGATATATCGGAGCTGAAAAAATTTCGAGAAGATCACAACTGCAAAAGTTTTAAGTGGTTCATGGAAGAAATAGCTTATGATATCACCTCACACTACCCTTTGCCACCCAAAAATGTTGACTGGGGAGAAGTAAGTA-GTCACATCTCAAAATGTATGTGTTT chr4 + 94230402 44725594 44725593 44725861 44725594 44725593 44725861 268 ATGTCATTCCTCTTCACAGAACTACGTCAGAGTTGTGGAAGTGTGGTGGGATGAATACAAAGATTATTTTTATGCCAGCCGGCCAGAGACAAAAGCACTGCCCTACGGAGACATATCTGAGCTGAAAAAGTTCCGTGAAGATCACAACTGCAAAAGTTTTAAGTGGTTCATGGAAGAAATAGCATATGATATAACATCGTATTATCCCTTACCACCTAAAAACGTGGAGTGGGGAGAGGTATGTACAGCACAT---AACATGTATTTATTT ..:.xx..::.:..:......:..:..:...........:..x..............:.....:..:..:.....:..:..x..x..:x.:x.:...:.:..x..:..:..:.....x...........:..:..x...............................................x........x..x..::.:..:..:..:.....:.....:..x..x........:...x...-:x.....---..x......x.:... 245M1I7M3D15M 212/267 79.4% 268/94230402 0.0% 4/267 1.5% 128588345 61626210 +3086 chr4 + 190214555 173316365 173316364 173316433 69 TTGTTACTTCCCAACGCCCTAGCTCCCACCCTAACTTCCTCTTCTTTTCCTTTTTTTCACCACACTTAT chr4 + 94230402 42374474 42374473 42374542 42374474 42374473 42374542 69 TTACTACTTTGAAATCTTCCAATTCCCACCCCACCCTCCTCTTCTCTCTCTCTTTTCCACCAGTTTTAT ..::.....:xx..:x::.:.::........:.x.:.........:.::..:....:.....xx:.... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 130941891 59272664 +7823 chr4 + 190214555 173317625 173317624 173317736 112 TTTTTTTAGATCAGAGGCTTCGAAACTGCTTACTGCATTGATAGCATGGGAAAAACAAATGGAGGCTTTGTTGAACTAGGACCCTGCCACAGGATGGGAGGGAATCAGGTAA chr4 + 94230402 44727993 44727992 44728104 44727993 44727992 44728104 112 TTTTTCCAGATCAGAGGCTTTGAAACAGCTTACTGCATTGACAGCATGGGGCACACCAACGGTGGCTTTGTAGAACTTGGACCATGCCACAGAATGGGAGGAAACCAGGTAA .....::.............:.....x..............:........:x.x..x..:..x........x.....x.....x........:........:..:....... 112M 95/112 84.8% 112/94230402 0.0% 0/112 0.0% 128589632 61624923 +10360 chr4 + 190214555 173318409 173318408 173318563 155 ATTCTCTCTTTTCCTTTTACAGCTTTTCAGAATCAATGAAGCAAATCAACTCATGCAGTATGACCAGTGTTTGACAAAGGGAGCTGATGGATCAAAAGTTATGATTACACACTGTAATCTAAATGAATTTAAGGAATGGCAGTACTTCAAGGTAT chr4 + 94230402 44729341 44729340 44729495 44729341 44729340 44729495 155 ATGCCATCTTATTTTTCTGTAGCTTTTCCGAATCAATGAAGCTAATCAGCTCATGCAGTATGATCAGTGCTTGACTAAAGGACCAGATGGATCCAAAATTATGATTACACATTGTAATCTGAATGAATACAAGGACTGGCAATACTTCAAGGTAT ..x.:x....x.::..:.::........x.............x.....:..............:.....:.....x..:...x.x........x...:.............:........:.......x:.....x.....:............. 155M 129/155 83.2% 155/94230402 0.0% 0/155 0.0% 128589068 61625487 +40620 chr4 + 190214555 173321558 173321557 173322314 757 TTTTTCTTACTGTGTTTTCCAGAACCTGCACAGATTTACTCATATTCCTTCAGGAAAGTGTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGACTCAAAAATGGGAAATGAATAACATCCATAGTGTTTAGAGAGAAAAAAATAAACCAATAACCTACCTACTGACAAGTAAATTTATACAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT-TTACAATAACATTATCATCTGCAGTTACTGTTTACAAGACTGCTTTTACCTTAAACTTTGTAGATGTTTACATCTTTTTGTTGTGTTTTAAGATGATGTTGGTAATT---TGTGCCTTTAGCTCTGTTTTATTAG-ACAGAGTTAAAGCA--TGTTGTCTTCTTTGGGATTACACTCAGGGGTCTGAAAGGCAGTTTGATTTTTATTTTTAACACACTTGAAAAAAGGTTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGT--GTCTTTATTTAATTTTACATCTTTTTGAAGCACTGCCACAGGTTATTAGCCAAGGTGGCCTTCCTTCACAGTCATGCTGCTTTTTTGAAAGGTGAATTTCAACACATTTAGTGCCTCTTTCATTTCTCAGTATATATTTC-----AAGAGCTTGTGATGAAATCTATAGGATGG chr4 + 94230402 44732053 44732052 44732767 44732053 44732052 44732767 715 TTGTTGTTATTGTTTTTTCCAGAATCTGCATAGATTTACACACATTCCTTCAGGGAAGTGCTTGGATCGGTCAGAAGTCCTACACCAAGTTTTCATTTCAGAGTGTGATTCCAGTAAAGCAACGCAGAAATGGGAAATGAACAACATTCTTAGTGTGTAG----------ATAAAC--AGAACCTACCTACTGACACGTTCATTTGTACAGGACTGAAAATAGCCTGAAAACTGCTGCAA------TTATTAA--CTGTACAGCTCC-------GAGCCTCCTGACTTGGATGAAGGACATAGATGAACTGTGATTATTACAATAACATGATCATCCGCAGTTAATGTTTACAAAACTGC-TTTACCTTAAACTCTGTAGATGTTTACATCTTTT-----TGTTTTAA---GACGTTGGTAACTTACTGCGCTGTTAGCTGTGTTTCATAGGAACATAGTTAAAGGCGTTGTTGTCTTCTTTGGGATTACACTCAGGGGTCTG-AAGGCAGTTT--------TTTTACACAAACTTG--AAAAGGTTGGAGTAACCAGATTTTC--ATAGAACTTGGTGATTATCAACCTGTTGTAAATTTTTATTTAATTTTACATCTTACT-AAGCACTGCCACAGGTTATTAGCCAGGGTGGCCTTCTCTCACACTCATGCTGCTTTTTTGGAAGGTGAATTTCAACATATTTAGTGCCTCTTCCGTTTCTC------TCTTTCACAAGAAAAGCATTGGTTGGAAATTATACAACGG ..x..x...:...x..........:.....:........x..:...........:.....:..:.....x.....:.....:..:.....x.....:..x:.x.....:.........:.:..x..:..............:.....:.x......x...----------......--.x................x..xx....:..............:x........x.........------.......--.....:......-------..:........::x.xx..........x...:..........-............x......:.......x.........:.....-.............:....................-----........---..:........:.---..:..:x......x.....:..x:.-...x........xx--..................................-..........--------....xx...x.....--..............:.....:....--...x.........................--:.:....................x:.-.........................:..........::.....x................:................:..............:.:......------.x....-----..:...x.xx.x..:..x:....x:.:.. 160M10D6M2D62M6D7M2D12M7D42M1I43M1D34M5D8M3D13M3I25M1I14M2I34M1D10M8D15M2D25M2D29M2I26M1D101M6D6M5I29M 608/701 86.7% 715/94230402 0.0% 70/701 10.0% 128589505 61625050 +23847 chr4 + 190214555 173323464 173323463 173323974 511 AAAAAAGAAACTAAGAGAGAAT--TGGTACTTTAATTACTTGTGTGTTTGCAAATAGGCTCCATTTTC-CATGTTGAGTAGATTA---TAACCTTATTAACTATGCATAGGCCTAAGAAAGGTGGCA-ATGAACTGTGCATGTAAATTTTAAATGGGTACTTTGTGCAATTCGTTAAAAGAAGATACTCTATG--AATATGATTCTATATATTGAAATCAGAAAACCTACCAAACA--AAAACATCAGAAGCTGCTGCCATAATGACTATTTTCTACTGTAGGCTGCTTTGGAAA-------------TAATTCCCATATCCTTGCTTTGTAAGT---TGGTAATATCACTATGCATTTCTACACATTTTATAAATTTGATTTATGCAGATTTTGATACACTGTATGTTTCTGTAGAAATTGTATAAATA-TTCAAAATTTTATTA-GGATAAATTTGAGAAACTTACGTATATCTTAATTCTGGGTTGCTTGTTTTTTAGGTGACAAAAATAAAATATTGTATTTTAATTCATGGGTTT chr4 + 94230402 44733870 44733869 44734387 44733870 44733869 44734387 518 AAAACGGAAAATAAGGGTGTGTGTCAGTACTT--GTTCCTTGTGTGTATGAAAACTGACTCCATTTTCGTGTGCTGGGTAGATTAATTTAATCATATTA-CTATGCATAAGAGAAAGAGTGGTGGCACATAAATTGTGCGT------TTTAAATGGGTTTTTTGTGCAATTCATTACAAGCTGACGCTGTGTGCGAATACGCATCTGTATGT-GAGACC-GAAACCTCACGAAACATGAGATCATAAGAAGCTGTTGCTGTAATGACTTTTTCATACTATAGCTTGCTTGGaaaaataataataataataattCCCATATTCTTGCTTTGTAAGTCGATGATAATATCACTATGCATTTCTACATATTTTATAAATTTGATTTATGCAGATTTTGATACACTGTATGTTTCTGTAGAAATTGTATAAATCTTTCAGAAATTTATTAGGGAGAAATCTGGGAAAC--ATGTATATCTTA----TGGGTTGCTTGTTTTTTAGGTGAAGTAAATAAAA-----TATTTGAATTCTTGGGTTT ....x:....x....:.x.x:.--::......--:..x.........x..x...:x.:..........-::..:..:........---...:.x.....-.........:.xxx....:x.......-..:..:.....:.------...........x:............:...x...xx..::..x.:..--....:.xx...:...:.-..:.:.-....x.::..x.....--.:.x...x........:...::........x...:x....:...x:.....x.:...-------------............:..............---..:.......................:................................................................x-....:..x.......-...x....:..:.....--.:..........----.......................x:x........-----.....x.....x....... 22M2I8M2D34M1I16M3I11M1D27M1I13M6D46M2I17M1D6M1D16M2I57M13I27M3I92M1I15M1I17M2D12M4D34M5D19M 408/489 83.4% 518/94230402 0.0% 51/489 10.4% 128589594 61624961 +3343 chr4 + 190214555 173325897 173325896 173325982 86 ATGTGTGGTGGCACACATCTGTGGTCCCAGCTGCTTGAGAGGCTGAGGCAGAAGAATCGCTTGAGTCTGGAAGGTGAAGGCTGCAG chr4 + 94230402 76033194 76033193 76033277 76033194 76033193 76033277 84 ATACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::::....::...:.--..:..:......:.....:........x.xx:x...x.:.....::.::....x.xx:.....:.. 18M2D66M 56/84 66.7% 84/94230402 0.0% 2/84 2.4% 97292703 92921852 +3234 chr4 + 190214555 173331372 173331371 173331423 52 ATACATATATATATATATATATATGTATATATATATACACACACCTGAGGAA chr4 + 94230402 60163468 60163467 60163519 60163468 60163467 60163519 52 ATAAATATATATATATGTGTATATATAAATGTGGAGACACACACCTGAGAAA ...x............:.:.....:..x..:.:x.x.............:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 113167904 77046651 +43323 chr4 + 190214555 173331674 173331673 173333654 1981 AGCATATTAAGACAAAGACAATAGAAATAATATACATAATTTTATTACAAAATTTTTTTTAAAAAAACGAAATGCAAC----ATCCTAAAAAACCCAAAATTTACTATTGATACTAATTCCTACA----AGTTTGCTG-----------------TGCTACCATACACAAGAAATTAAAAAAACCATTAAATATTTAGGAACATTCAACATCAGAAGCTGTAAAATCT-AACTGTATGAGTAGCCCATCAAAAAGCTACAACCTGCATTTTTTAAAAGTAT---TTTCTCTACAGAGAATCTTATCAGCTATACAAAAATCTGTACAG-TTTTTATACTGAAGCTAGTATTGAGCTGCACTTGAATTCACATTCTTAGCAAAATAATTGCCT--GAGCACACACACACATTCCACACGCATCATTAAAGGATAGCCATTTATTCTTCATCTTCATCCTCTTCCTCCTCATCTTCATCTTCTTCTTCCTCCTCCTCCTCCTCATCTTCTGGTTCGTTCTTCTTCTTTGAGCCTGTTGGCCTGCCAGGGCCCTTCTTTCCTGCTTCACTTTTGCCCTTGGCACGATATGCAGCAATATCCTGAAATATTGTCAAAAAAATAAAGCATCCGGTATCATTACTCAACTGTGAAAAACCACTTAGTTGTAAACAATCTAAGATGATTGACCAATAACCCTAATAACTGTCTAAAAAGGTAACCAGTCTAAGTTTTTAGAGCACTTATCCCACTAGGCTTTAACAAGTTAATGACGTAAAATGACAAGGGTTGCGATACAGCAGTATCAGTACTTTCACTACCAATACCCTTTTACATCACACACAGTGCCATAGTCCCTCCTGTACCTTCACATTTTATATATATCTACATAAAACAATTTCTT------TGACTCTCTGCTTAAAAAAAAAAATAACAGACTATACAGACTATACAATAACTACAAGTAACTACAAGTCTGTCTGCAGGAATATACTAGTGCTACAAACACTGGTTTCAGTCAAAAGGAAGGTTTCAATTACCTTGTGTTG------AAGTGTACAAT---TTTCATTAGGCCTTTTCA------------AAACATA-GCTGACAACCATTAATACAAGATTAACTAAATTTCCCAGGTTTTCTACAGTTATTACCTATACCTAGTCTTATCCACGGCTTTAAAAAAGATGACACTGTACCTTTTCATATTTCTCCTTTAGCTTAGCTGCTTTCTGTTCATATGGTTGTTTATCTTTGGCTGACTGCTCAGACCACATTTCACCCAATTTCTTTGCAGTATCCCCAATGGATAGGCCAGGGTGTTCACTTTTGATCTTTGGGCGATGTTCAGAGCAAAACAGGAAGAAGGCAGATCTGAAAGGAAGCAACAGAGTTTAATAAACTGAAGGAAAAATCCAAGGAGCAAT-TTGGGTTATTTTAA----------ACTTACGGTGGCCTTTTAGGAGCATTGGGGTCCTTTTTCTTCCCCTTCTTATCACCTTTGGGAGGAACGTAATTTTTCATCTCCCTGTCATAGCGAGCTTTGTCACTTTTTGCCATATCTTCAAACTTCGACTTCTCCTTTGCAGACATGGTCTGTGGACATAAAATAAGAGCCAAAAATACAGCAAAATTGTTACCTATAAACATCCAAAGACGACAAGATCATCTTTAAGGACCACATTTTCCTTAACAGCATTTTGCTTTCGAAGTCTTATATAAGTAAAAACCTAAAATCGTCTGCCTGGAACTCTTAAGATATTCAGGTGAGTCACTGGGGTGGCAA--AGTTGAAGCTCATGAGTTGCCTACTACCTGCCTAAGGCCCTCCTAGCCGAAAACCACACCTGCACCCCCTGAGCTCCGTCCCTCTCCTGCCTCACCTTCCATCTCTCCGAACACTTCTTGGAGAATTCCGCGAAATTGACGGAAGAGTCCGGGTGTTTCTTCTTGTGCTCTTCCCGGCAGGTCTGCACGAAGAAGGCGTACGAGGACATTTTGCCCCGCGGCTTGTTGGGGTCTCCTTTACCCATGTTGA chr4 + 94230402 44739547 44739546 44741208 44739547 44739546 44741208 1662 AGCATA-----ACAAGTAGAACAATAATCATGTACAACATTTTATTACAAAATTGTT---AAAAAAAAGTAATACAATGAATATACTACAAAATATAAGATCAGCTATTAA-GCTACCTCCTTTATTTTACTTAGCTAAAAAAAAAAAAACACCTGGCTATCATTCACTGAATTTCAACAAAACCATTAAATATGCAGAAACATTCCACAACTTCTTCTTTTAAAACTGAACTGTAGCAGCACTC--------AGCTACTACTTAC----TTTAGAAATAGAGGTCTCCCTACAAAGAACCACATTACCTATACACAA-TCTGTACAGATTTTTATACTGAAGCTAACAATGAGCTGCACTTGAGTTCACATTCTTAGCAAAATATTGGATTTCGAGCATAAAT--------------CTTTACAGCAGGGCATTCATTTActcctcatcctcttcttcttcctcctcttcctcatcctc------ctcctcctcctcctcctcttcTGGTTCTGCTTTCTTCTTAGATCCTGCAGGCCTACCTGGGCCCTTTTTTCCTGCATCACTCTTGCTCTTGGCACGATATGCTGCAATATCCTGCAA--------GAAAGATG---------------------------------CTGCTTAGTTGCTGGTGAT----------------GCAACTCTGACGACAATC--------------GTGTA-----CTAGCACAGTGAT-------------------TTAATGCTGCAGTATATGTGGAGAAGTGGGTTTTCAACCTTAGGACTTCCATGTT---TTCCCCTTCTGGTGAGAGAACATACATTAATCCATATAGTTCTATGA-ATTTTACG-----------GAGGCAGTGCCTTGGAACATGACTGCTTGTTTTTCTAAGTAGGTGACCCATTTT--------TTCTGTAAGGAAAAGCACTTACAAA---ATCCTTAGACATATA----------AAAAAACGCATTCAGCCTACCGCAAGGGTTCC-TTGCCACACCTTTCCACACACGTGTATACTGAACTTTGCCAGGCTTCCACATGTGGAATTGTGAACCACATGCAGGTAACGGGCAAATCAGAAGTCAT---ATTTACAGTGACTTCTACAACTGTCATGACTATCAGGT--TATTCTGAG------------------TGTACCTTTTCATATTTCTCCTTTAGCTTTGCAGCCTTCTGTTCATAGGGTTGCTTGTCTTTGGCCGACTGTTCAGACCACATTTCACCCAACTTCTTTGCCGTGTCTCCGATAGACAAGCCGGGATGATCATTTTTTATTTTTGGACGGTGTTCGGAACAGAAAAGGAAGAATGCAGATCTGAAA-CAAGAAATGACGTTTAAG----CGAGAGGCTAGCGGAACGTACGCTGTGGGGTTTGTTTAATCCCATAAACACTCACGGTGGTCTTTTAGGAGCGTTGGGGTCCTTCTTCTTTCCCTTCTTCTCTCCTTTGGGAGGAACATAGTTCTTCATCTCCCTGTCGTAGCGAGCTTTGTCTCCCTTGGCCATCTCCTCGAACTTCCCTTTCTCCTTGCTGGACATCGTCTGCAGACACA----------------------------------------------------------------------------------------------------CGCAAT----------------------------------------------------GGAGAGGCGCGGGGGGCGGGATCAGACGGAGC-----------------CCCGCC----GCCCCCACGGCCG-----CGCAGCAGCCGCCTTT------------CCACCGGCCTCACCTTCCACCGCTCCGAGCACTTCCGCGAGAACTCGGCGAAGTTGACTGACGAGTCCGGGTGCTTCTTCTTGTGCTCCTCGCGGCACGTCTGCACGAAGTACGCGTACGAGGACATCTTGCCCCGCGGCTTGTTGGGGTCGCCCTTGCCCATGGCGA ......-----....:x.x..:.:x...x..:....xx................x..---.......x.x...:...:----..x...x....:x:..:..:x:.....:.-:...x:....x:.----.x..x...:-----------------x....:...x...x::.xx.:..x...............x:..:.......x...x.xxxxx..x.x...x..-.......xx..:.x:.--------......x..:.:.----....:..:..x---.:..:.....:....:.x:..:.x.......x..-.........-.................::.x..............:....................x.x.x:.--.....:.x.:--------------.x.:.:x:x...::.x:......:..:.....:..x..:...........x..:.....:..------...............x...........xx::........x..x....:x.....:..x........:........x.....:....:...............x...........x..--------:...:..:---------------------------------.::........:x::::..----------------::...:..:.::..x:..--------------..x..-----:...x:..x.x..-------------------......x:.:.:x..:xxx:.:.xx.:.:xx:xx..::x.:..x....:..:xx:---.x...:..:xx:.x.x.x.xx:.:.xx..:...x.x:x..x.:x.x.-......::-----------:.::..:.x:...------.....x::..:..xxxx..:x.::.:..xx.:.x.--------.x.x:...xx.x...:.x:.....:---:..:x:..:x.....----------...x.x:.xx.....:.x.xx.x....x...x-..:..x:::x..x------.x.....:.x.---:..::::....:.::x..------------..x..:.-..x.::...x:x:..xx..::.x.x.:---....x.x:x.x:.......::.:.:.:xxx..:.x:..--...:.xx:.------------------.............................x..x..:...........x.....:..:........:.....:....................:........x..:..:..:..:..:.:...:..:..x...:....x..:.....:..:.....:..:..:..x........x............-x...x..:::x......x----:..::.:xx.::xx..x.x:.:x.-.x.....xx.....----------...:.......:...........:...........:.....:........x..x..............:..:..:..............:..............x.::..x.....x..:..:......xx:........xx::.....x.....::....:.----------------------------------------------------------------------------------------------------..x.:.----------------------------------------------------..x...x.:.x....xx.x:.--..x:.:...-----------------..:...----....:.x::....-----.:..x.x..xx..::.------------:.x..x.............:.x......:......:xx.....:..x.....:.....x..x...........:..............:..x.....x............x.x..............:.......................x..:..:......x:.. 6M5D46M3D18M4I29M1D13M4I9M17I73M1I16M8D13M4D11M3I34M1D9M1I63M2I10M14D62M6D117M8D8M33D19M16D18M14D5M5D13M19D55M3D47M1D8M11D13M6I35M8D25M3D15M10D32M1D13M6I11M3I18M12I7M1I27M3D38M2D9M18D186M1D18M4D24M1I14M10I163M100D6M52D21M2I9M17D6M4D13M5D16M12D168M 1145/1589 72.1% 1662/94230402 0.0% 465/1589 29.3% 128592127 61622428 +8940 chr4 + 190214555 173332818 173332817 173333024 207 TACCTTTTCATATTTCTCCTTTAGCTTAGCTGCTTTCTGTTCATATGGTTGTTTATCTT--TGGCTGACTGCTCAGACCACATTTCACCCAATTTCTTTGCAGTATCCCCAATGGATAGGCCAGGGTGTTCACTTTTGATCTTTGGGCGATGTTCAGAGCAAAACAGGAAGAAGGCAGATCTGAAAGGAAGCAACAGAGTTTAATAAAC chr4 + 94230402 17789152 17789151 17789358 17789152 17789151 17789358 207 TACCTTCTCGTACTTCTCCTTCAGCTTAGCAGCCTTATTGTTATAGGGCTGCTTTTCACCATCACTGA--GGTTGTTCCACATTTCACCAAGCTTCTTTGCTACGTCCCCAATGGATATGCCAGGGTTTGTGGACTTGATCTTGGGGCGGAACTCTGAGCAGAATAGGAAGAAGCCAGACCTGGGGAGAAGCACCAGAGGGCAGTGAGC ......:..:..:........:........x..:..x.xx.:...x..:..:..x..x:--.x:....--.x.::xx............x.::........x:::.............x........x.x::xx:........x.....:x::..x.....:..:.........x....:...::::......x.....xx:.:.:.:. 59M2I7M2D139M 146/205 71.2% 207/94230402 0.0% 4/205 2.0% 155543666 34670889 +7333 chr4 + 190214555 173333063 173333062 173333245 183 ACTTACGGTGGCCTTTTAGGAGCATTGGGGTCCTTTTTCTTCCCCTTCTTATCACCTTTGGGAGGAACGTAATTTTTCATCTCCCTGTCATAGCGAGCTTTGTCACTTTTTGCCATATCTTCAAACTTCGACTTCTCCTTTGCAGACATGGTCTGTGGACATAAAATAAGAGCCAAAAATACA chr4 + 94230402 17789822 17789821 17789990 17789822 17789821 17789990 169 ACTTACGGTGGTCGCTTTGGGGCATTGGGGTCCTTCTT------CTTCTTGCCACCCTTAGCTGGGCCATAGTCCTTCATTTCTCTATCGTATCGTACCTTATCAGCCTTTGCCATTTCATCAAATTTAGCCTTCTCCTTGCTTGACATGGTC--------TAAAAAACACACAAAAAACACA ...........:.x:..x..:..............:..------......::....:..:.xx..:x.:..:.::.....:..:..:..:..x..x:.:..:...x::........x..x.....:..x.x.........xx:x.........--------.....x.x:x:.x.....:... 38M6D109M8D22M 123/169 72.8% 169/94230402 0.0% 14/169 8.3% 155543241 34671314 +3127 chr4 + 190214555 173339235 173339234 173339317 83 CATGGTGGCACGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCAGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:..--....:.:...........::........x.xx.x...x::.....:..x:.:..x:xx:..:..:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 97306038 92908517 +3030 chr4 + 190214555 173355720 173355719 173355772 53 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030077 90030076 90030129 90030077 90030076 90030129 53 AATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ..x.......xxx:...::..............:.:.:............x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 83325643 NA +3191 chr4 + 190214555 173355720 173355719 173355774 55 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495001 1495000 1495055 1495001 1495000 1495055 55 AACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ..x.:.........x.:......x........:.:..:...:.....x....::. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 171860719 18353836 +3496 chr4 + 190214555 173355721 173355720 173355776 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 171860721 18353834 +3253 chr4 + 190214555 173355723 173355722 173355775 53 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:....x..........:.:..:...:.....x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 171860723 18353832 +3035 chr4 + 190214555 173362968 173362967 173363024 57 TGCACTTGTAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGAATCACCTGAGCCTGG chr4 + 94230402 76033205 76033204 76033261 76033205 76033204 76033261 57 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG .....x......:.......:...::........x:xx.x...x...:...:..::. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 97329763 92884792 +3018 chr4 + 190214555 173368030 173368029 173368068 39 CAGGGGAGAAAGCAATCAGGGCACACAGCTCTAGCATTA chr4 + 94230402 59420327 59420326 59420365 59420327 59420326 59420365 39 CAGGAGGGGAAGCATTCAGGGCACACAGCTCTAGCATCA ....:.:.:.....x......................:. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 113947703 76266852 +16012 chr4 + 190214555 173371159 173371158 173371500 342 CGCCGGCCTCGGGAGCTCGGAGACATGAACGGCTTCACGCCTGACGAGATGAGCCGCGGCGGGGATGCGGCCGCCGCAGTGGCCGCAGTGGTCGCTGCCGCGGCCGCCGCCGCCTCGGCGGGG--AACGGGACCGGCGCGGGCACCGGGGCTGAGGTGCCGGGCGCGGGGGC---GGTCTCAGCGGCTGGGCCCCCGGGGGCGGCCGGGCCGGGCCCCGGGCAACTGTGCTGCCTGCGGGAGGATGGTGAGCGGTGCGGCCGGGCGGCAGGCAACGCCAGCTTCAGCAAGAGGATCCAGAAGAGCATCTCCCAGAAGAAGGTGAAGATCGAGCTGGATAAGAGCGTA chr4 + 94230402 44753462 44753461 44753783 44753462 44753461 44753783 322 CGCCAGCCC-----GCCGCGGGGCATGAACGGCTTCGCCCCCGAGGAGCTGCCCCAGCGCGGGGCCGACCCCGCCGCCGCAGCCGCGGTGAGCGGTGCGGG------CTCCGTGTCGGAGGTgccggcggggctggcgc---ccccggggctg--------gctgcgggagccgcgggctcggcgggcgcggcc---ggggcgggcggccccggggccgggcAGCTGTGCTGCCTGCGGGAGGAGGGCGAGCGGTGCGGCCGCGCCGCCGGCAACGCCAGCTTCAGCAAGAGGATCCAGAAGAGCATCTCCCAGAAGAAGGTGAAGATCGAGCTGGACAAGAGCGTA ....:...:-----..:xx.:.:.............:.x..:..x...x..xx..:xx......x:.xxx.......x.::.....:...:x..x...x.x------.x...:x....x..x.--::....:.:.....---.x.........--------.x:.....:..---..x...:....x:.x.x..---.......x...x..x..xx.......:....................x..:..............x..x..x....................................................................:......... 9M5D87M6D16M2I14M3D11M8D11M3I19M3D150M 255/317 80.4% 322/94230402 0.0% 30/317 9.5% 128617697 61596858 +8698 chr4 + 190214555 173373378 173373377 173373531 154 TTTCTGTTTCAGGCAAGGCATCTTTACATATGTGATTATCATAAAAACTTAATTCAGAGTGTTCGAAACAGAAGAAAGAGAAAAGGGAGTGATGATGATGGAGGTGATTCACCTGTTCAAGATATTGATACCCCAGAGGTAGATGGAAGTTTTT chr4 + 94230402 44754510 44754509 44754660 44754510 44754509 44754660 151 TTACTCTTGTAGGCGAGACACCTTTATATCTGTGACTTCCACAAAAACTTAATTCAGAGCGTGAGAAATAGAAGGAAGAGAAAAGGCAGTGATGACGAT---GGTGACTCACCAGTGCAAGACATCGACACTCCAGAGGTAGCCAACAGTTTTT ..x..x..x:....:..:..:.....:..x.....:.x:..:.................:..xx....:.....:...........x........:...---.....:.....x..x.....:..:..:..:..........x:::x....... 99M3D52M 119/151 78.8% 151/94230402 0.0% 3/151 2.0% 128618868 61595687 +9276 chr4 + 190214555 173373929 173373928 173374052 124 TTTTTTCTAGGTTGATTTATACCAATTACAAGTAAATACACTTAGGAGATACAAAAGACACTTCAAGCTACCAACCAGACCAGGACTTAATAAAGCACAACTTGTTGAGGTATATATGAGTTTT chr4 + 94230402 44756944 44756943 44757067 44756944 44756943 44757067 124 TTTCTTTTAGGTTGATTTATATCAGTTACAAGTGAACACACTTCGAAGGTACAAAAGACACTTCAAGCTACAGACCAGACCGGGACTTAACAAAGCACAGCTTGTTGAAGTATGTATGAGTGTT ...:..:..............:..:........:..:......x.:..:......................x:........:........:........:........:....:.......x.. 124M 107/124 86.3% 124/94230402 0.0% 0/124 0.0% 128616985 61597570 +15144 chr4 + 190214555 173377173 173377172 173377555 383 TTTAATTTCCTTAATTTTTCTTTTCTTTGTAGATAGTTGGTTGCCACTTTAGGTCTATTCCAGTGAATGAAAAAGACACCTTAACATATTTCATCTACTCAGTGAAGAATGACAAGAACAAATCAGATCTCAAGGTTGATAGTGGTGTTCACTAGG-----AGACGTGGAATTGAGACTAATAACTTGGATGTTAACACTGTTTACTGTTTTTTCACATGTAGAAATGTTCTTTGTGTATTTTTTCTACAGAGGATTTTCTCTGATTTTATTTTCTTTGTTTCTGACTCTAATAATTAGTTGGAAA-----CTCATATAAAATGAGCTTTCCTAAATTAAATCTATTTTAAATAAAGGTTATTACTATTATAGTTGCTTCAGTGTATTTATTT chr4 + 94230402 44759090 44759089 44759465 44759090 44759089 44759465 376 TTTAATTTCCTTGCATTCT---TCCTTTGTAGATCATTGGCTGCCATTTTAGGACAATTCCAGTGAATGAAAAGGACACCTTAGCGTATTTCATCTACTCGGTCAAGAATGACAAGAACAAACCAGATCTAAAGATGGATAGTGGTGTTCATTAGGCAGCAAAAATTGGGACTGAGACTCAGGCCGCAAATCAAAAGACTGAGGGTT-TTTGTTGATATGCAAAAGCTTTCTTTGTAACTTTTTCTCCCCAGAGAGTTTCTCTG-TTTTATTTT-----TTCATAACCTTGATGATTTGTTTGAAAACCATCTCTTATGAAACAAATTTCCTCA----CAAACTATTTTAAATAAA---TATTACTGATATTGTTGCTCAAGTGGGTGTGTCT ............:xx..:.---.:..........x:....:.....:......x.x.................:.........:.:..............:..x..................:.......x...:.x..............:....-----.:.xx...:.:.......x.x:x.x:::..xxx..x....xxx::.-...x..x.:...:.:..::x........:xx.....:::x.x:::..x........-.........-----..:x.:..::.:..:...x...x....-----...x...:...::.::..:.::.----x..x..............---.......:x...x......:x....x:.x.:.:. 19M3D134M5I46M1D56M1D9M5D27M5I23M4D18M3D34M 273/366 74.6% 376/94230402 0.0% 27/366 7.4% 128618083 61596472 +3190 chr4 + 190214555 173378997 173378996 173379067 71 TGCATCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAAATCACTTGAGCCTGGGAGA--CGGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:x.:....:...........::........x:xx.x:..x.......:..::.:..x--:......:.. 61M2I10M 51/71 71.8% 73/94230402 0.0% 2/71 2.8% 97345792 92868763 +4419 chr4 + 190214555 173388341 173388340 173388421 81 TCATTGATTGTTGCAAGGAATCACGAAAGAGATCTTTGGTCCAAAGAAAACGTCTCTGAAAGAAAATAGAGCATCAATTAA chr4 + 94230402 44762566 44762565 44762646 44762566 44762565 44762646 81 TCACTCACTGTTACAGGGGATCACAAAAGATATCTTCGGTCCAAAGAAAATCTCCCTGAAAGATATTAGATATTTAAATAA ...:.x.:....:..:..:.....:.....x.....:.............:x..:........x.x....xxx.:..x... 81M 62/81 76.5% 81/94230402 0.0% 0/81 0.0% 128625775 61588780 +3369 chr4 + 190214555 173390436 173390435 173390499 64 TTGATCCATTCACTGAGTTTTTTGTTGTTGTTGTTCGTTTTTTTTTTTTTTTTTGAGATGGAGT chr4 + 94230402 36956627 36956626 36956690 36956627 36956626 36956690 64 TCAATTCATAGACTCAGTTTTCTGTTGTTGTTGTTGGTTTGTTGTTTTTTTTTTTAAACTAAGT .::..:...xx...x......:.............x....x..x..........x.:.:x:... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 136433809 53780746 +3391 chr4 + 190214555 173390450 173390449 173390494 45 GAGTTTTTTGTTGTTGTTGTTCGTTTTTTTTTTTTTTTTTGAGAT chr4 + 94230402 18999250 18999249 18999294 18999250 18999249 18999294 45 GGGTTTTTTGTTGTTGTTGTTCTTTTTTTTTTTTTTCTCTGATAT .:....................x.............:.:...x.. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 154391200 35823355 +9415 chr4 + 190214555 173391139 173391138 173391417 279 CCAGGCAATACACTTTGTGATACCATTT-CCTTACTTTGGGCAGCAGAGCAATTCGCTGAAGTTGCAGTAACAGATCATCTCACATCCCTTCCCATCCCAGAAATGATCCTGGACATTGACATCAATCTGTGTCAGGTCAGCTACTCCTTCCGGAAGGTTGTGACAGTTGTGATCTTTTAGTATCTTTCTGTAGCAAGAGAGGCGATTTGCAGGCATGGCTTGAACTCCTAGCAGCAAAGTTAGCCCAATGGTGAAAACAAGTACCATCAGTTTCATTTT chr4 + 94230402 44763922 44763921 44764191 44763922 44763921 44764191 270 ccaggc----cattctatgattctatgaatctTACTTTGGACAGCAGAGCAGTTCCTTGAAGTTGCAGTAACAGATGGTCTCGCAGCCTTCCCCTTCCCAAAAGTGATCCTGCAGGCTCTCATCAACTCGCCGGAGGCTCGCCATGCCTTCGGGGATGCTGTGGCAGCTGTGGTTGTGCAGGATCCTCTTGTAGCATGAGGGCCGCCGGGAGGGCACTGTGTGGACACCCAGGAGGGCACTCAGCAGAA--GCAGAACCAAG----AGCATCTTCATTTT ......----..:.:.:....x.:..xx-:..........:..........:...x:...................x:....:..x..:.:...x.....:..:........x.x::.xx......:::.:xxx...::x..:.:x.....x..:.x.:....:...:....:.:x.x:..x...:.::.......x...:.x..x:xx.x:....:x.:x..:..x..:..x..x:x.x.:...xx..--.:::..x....----.x..x:........ 6M4D18M1I220M2D11M4D14M 183/269 68.0% 270/94230402 0.0% 11/269 4.1% 128627217 61587338 +3248 chr4 + 190214555 173392951 173392950 173393033 83 CATGGTGGCATGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGACAATGGCTTGAACCTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--...:.x....:.:...........::........x.x..xx..xx:........::.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 97359754 92854801 +3614 chr4 + 190214555 173394515 173394514 173394586 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGATGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGATTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::...x....x.xx.x...x.............:..x:xx:.::..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 97361309 92853246 +3115 chr4 + 190214555 173407393 173407392 173407477 85 ACATGGTGGCCAGCGCCCTGTAGTCCCAGCTACTGGAGAGGCTGAGGCAGAAGAATCACTTGAACTTGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG---TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....:xx:..---......:.........x..:........x.xx:x...x.........:::.:..x.xx::.:..:.. 15M3D67M 56/82 68.3% 82/94230402 0.0% 3/82 3.7% 97374197 92840358 +3133 chr4 + 190214555 173408969 173408968 173409022 54 GCGAAAGAGCAAGACTCAGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ..:..:.........xxxx.........::.:...............x.x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 85026261 NA +3099 chr4 + 190214555 173430677 173430676 173430760 84 TGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGAGAGAATCACCTAAGCCTGGGAGGTAGATGCTATGGTAAGCCATGAT chr4 + 94230402 76033205 76033204 76033285 76033205 76033204 76033285 81 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT---GTAGAACATGAT .....x......:...........::.......:x:xx.x...x...:.:.:..::.:..x.xx:x...---...::x...... 69M3D12M 56/81 69.1% 81/94230402 0.0% 3/81 3.7% 97397472 92817083 +3007 chr4 + 190214555 173430795 173430794 173430864 70 AGACCCTGTCTCAAAAAA--AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAGAGAAAATACAGGGAAAA chr4 + 94230402 89572246 89572245 89572317 89572246 89572245 89572317 72 AGTCCCTACACCACATAATCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAA ..x....::x:..x.x..--..x.:..........................:x..x:..:::...:x:.... 18M2I52M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% 83858549 NA +3299 chr4 + 190214555 173430801 173430800 173430891 91 TGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAGAGAAAATACAGGGA--AAAACAATCTATAGTCATCAGAAAAAACAG chr4 + 94230402 7875196 7875195 7875284 7875196 7875195 7875284 89 TATTTTAGAAAATACTTAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAGGTCTTGGAATTAAATAAATTT----TCTGTGGAAAACACAG .:.:.:.:....x.xxx...........................:......::.x:x..:.--...xx...:.----..xx::.....x.... 61M2I10M4D16M 64/87 73.6% 89/94230402 0.0% 6/87 6.9% 165555605 24658950 +3234 chr4 + 190214555 173430812 173430811 173430917 106 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAGAGAAAATACAGGGAAAAACAATCTATAGTCATCAGAAAAAACAGCCACTATAATTAGATCCTCATTTAGA chr4 + 94230402 75300456 75300455 75300543 75300456 75300455 75300543 88 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAG------AAATTCAG------------TATCATCTGCAGACAGTACAAGCACCACCTGGGGATCCTCTCTTGGA ..................:..............------....x...------------...x:..xx....x.:x...:x...:.:xxxx:.......x:..:.. 33M6D8M12D47M 67/88 76.1% 88/94230402 0.0% 18/88 20.5% 98130356 92084199 +3171 chr4 + 190214555 173430817 173430816 173430869 53 AAAAAAAAAAAAAAAGAGAGAGAGAGAGGAGAGAAAATACAGGGAAAAACAAT chr4 + 94230402 44890393 44890392 44890445 44890393 44890392 44890445 53 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAAAT ..::...........:............:..:::.......xx:....:x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 128540424 61674131 +10871 chr4 + 190214555 173436276 173436275 173436605 330 GTGATTCAAGTGCACTTTCATAATTTGCTCTTGCTTTACCCT---------CTTTGTTATGTCCACATTCCACACGAATCCATCACTTCTCTCTGAGTTATGTGCTGCTCAGGACTGATGCTCTTACCACCCACCCAGTCAGAGC--AGCCTCTGCTTCTCAAACTCGCAGAACCTGTTGTTCTGTCCCTCTCTTACCTAGTGCTGTCACTGTAGCCTTTTACCTCCAGCCGGG--GGCAGGGAAATGACTCCCCAGAGAGCCATTTCTCATGGTCATAAATGTTC--TATTTTACTAAG-TTCCATCAACATTCACCA-AACACTGAAG-CAAAACAATCGTTCTCT chr4 + 94230402 44787398 44787397 44787736 44787398 44787397 44787736 339 GTTACTTTAATATGCTTTCATACTCTGTT--TGCTCTACTTTATTTCTCAGCTTTGTTATTTCCACTCCCCAGTAAAATCTATCACCTTTGAATGAGTTATTTGCTTTTCTGGACTGCAGCAAATACCACCCACTCTGTTAAGGTCAGGCTCCAGCTCCTTGACTTCGC------TATTGTTCTGTCCCTTCCTTACCCACT-CTGTCATTGCAGCACGACAGCTCCAGCTGGGAGGGCAGGGAAATCACTCCCTCAAGAGCAGTTTATCATGGCAATAAATGTTATGTGTTTTAGTAGGATGCCATCAAAGTTCACCATCATGCTGAAGCCGAAACAATTAGTCCTT ..x.:.:x.:.:::........x.:..:.--....:...::.---------.........x.....x::...xxx:....:.....:.:.xxx........x....x:..x......xx..xxx..........:.x..:.::.:--:..::.x...:..::.x:....------.:.............::......:.x.-......:..:...x:xx:.x.......:...--...........x......:x:.....x:...x......:x.........x--.:.....x..:.-.x.......x:.......-x.::......-.:.......::x..::. 29M2D11M9I94M2I22M6D27M1D31M2I50M2I12M1I18M1I10M1I17M 230/321 71.7% 339/94230402 0.0% 27/321 8.4% 128648878 61565677 +3593 chr4 + 190214555 173445453 173445452 173445524 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGTGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:...:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 97412247 92802308 +17231 chr4 + 190214555 173448500 173448499 173449123 624 ACCGACAAGCCTGAAATGACCCTTCTGTGAACAAGGTTTTACACTGGGATTTGAAATACCGGAAAAGTTGTGTCCCTAGAAAAGTAACTCTA-GCCTTAACATCAGCAAAATGAGGATTTATTTTTATTTTTATTTATTTTTGCATTCAGAGAGGAATGATGATGTCATCCATGTCCTTACACACATCTTAATTTGTGGATTTTTTCTTACTTAACTCTCTTAATTGGATGAAAGTATGCAGCTGATGATTTATGGA-TCGCTAGTTGTGCCAGGCATCTTTTTAAATATGCACAGCTGCTCTGCAGTAGTTTAACTTGGCAGATAGTATTAAACCATTGAGTTGTGTCATTTATTTGTACATGCATACAATAGCCTCCTTGTACAGGTTCTTCCAAAATCTCTACAGGAATGGTTTAGGACCATGCATTTAAAG------AGTCTCAGAAAGTATTCTTTTGGAAGATTTT------CAGT--TTCCAGAATAAAGAATGAGATAGCATTT-TGC----GATGTTGCTAAG------------TTCCCAAGGGAATCACAGAGACAGG--CTGAAGTGGAG--------AGGCTAACAGAGTGAGAGGTCT------------CCAGTGT-----ACATTTGGGAACTCCA------ATTTCAGTGGTCGTTTAGGCAATGTAGGACGT chr4 + 94230402 44794375 44794374 44795055 44794375 44794374 44795055 681 ACTGTCTGGCTTCAAGCAAGCCTGCTTATAACAATAATTTTGAC-AACATCTGAAACACTTACAGAAATGGG--CATTGGGAAATAATTATAAGCCTCACAATTTAGAGAACATTGATTTCTTTTT---TTTCCCCAGTTCCTTATTCACAAGTGTATAGAGATGTCATTTATGCCC---CAGACACATTAATTTCTAATTTTTTTCCCCTTTAACTCTCTTAATTGGAAGAAAGTATGTTACTGCTGATTTATGAACTCTTCAGAAGTGCCAGGGATCATTTTAAATGTACACAGCTGCTCTGCAGTAGTTTAACTTGGCAGATAGTATTAAACCATTGAATTGTGTCATTTATTTGTGTATGCACACAATAAGTTCCTTGTGCAGGTTCTTCAGAAATAGTCTCAATGTTGATTCGGAAATATGGCCTAAAAATAACCTAGTCCCATGATTTATTGTTTTGGTGCTTGTCTCCAAACAGTACATCTAAAATGAAGAATGAGATAACATGTATACCCCAGATAAGGCAACGGAATGGAAACCATCCGTAAGAGGATCTGTAGGCCAAGGTCTAAAATGGAAAAGTTCCCAGGGTGACAGAGTAAGACACATGATGGGAATCGACCTGTGTTGCTGATATTTGGGAACTCTGCAACGTATTTCATTGCTAGAAGAGGGAGTATACGATGT ..:.x.x:..:.x..:::.x...x..xxx.....x:x...xx..-::x..:.....:..:x:x.:.:x..x.--.x.x.::..:...:.x..-....:.xx..:x:x.:..::xx.....x.....---...x:::.x..::x:.....x.::x.x..::x........::...:..---..x...:x.......x.::x.......::x:..................x.........:x:...x.........:.-..x::..xx........x...x........:.:..................................................:.................::.....:......:x:.......:..........x:....xx::x..:x:x..:..::.:.x:...xx:.x...:------....:..x:.xx....x......x:xx.x.:------....--x..:.:...:............:...x.-.:.----...:xx..x.x.------------.:.x:...:.:...xxx::.x..:.--..:..:....:--------...x.:.......:...x::x.------------..x....-----.:............::------......x..x.x.xxx...x.:.:..x..:.. 44M1D27M2D18M1I33M3D48M3D77M1I177M6I31M6I4M2I28M1I3M4I12M12I25M2I11M8I22M12I7M5I16M6I32M 426/615 69.3% 681/94230402 0.0% 75/615 12.2% 128654125 61560430 +3034 chr4 + 190214555 173480349 173480348 173480383 35 TTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTAAGG chr4 + 94230402 12568763 12568762 12568797 12568763 12568762 12568797 35 TTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTAAGG ....x.............................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 160911586 29302969 +3707 chr4 + 190214555 173482687 173482686 173482760 74 GTGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCCAGAGGACCACATGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:.:.........::........x..x.x.:.x...x...:.....:..x.:x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 97449483 92765072 +3482 chr4 + 190214555 173482856 173482855 173482960 105 ATATATTTCATATATATTTTTTATATGTTATATATTATATATAATATATATTAAATATATAATACATATAATATATTATATATGAAATATATAATATATTGTACA chr4 + 94230402 26320249 26320248 26320353 26320249 26320248 26320353 105 ATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCA ..x...:...:..:...x.x:..:..:........xx......xx.......x.x...:..x:xx...xx....x..xx:...x:x....:.....x.x..x:.. 105M 71/105 67.6% 105/94230402 0.0% 0/105 0.0% 147162607 43051948 +3694 chr4 + 190214555 173482891 173482890 173482976 86 TATATATAATATATATTAAATATATAATACATATAATATATTATATATGAAATATATAATATATTGTACATATTGTATATATAATA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTA--TATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:......x..:......--......x..:...:........xxx....x.x:xx...:......x.xx:..........:..... 18M2D66M 64/84 76.2% 84/94230402 0.0% 2/84 2.4% 147162630 43051925 +4434 chr4 + 190214555 173483360 173483359 173483809 450 TTATATGTAATATTATATTATATATTAT-ATATTATATCATGATATATATTATA----------TATTATATCATGATATAGTATATATTATATATTATATCATGATATATATTATATATTAT--ATTCTGATATATAATATATTATATATTATATTCT-GATATATAATATATAT-----TATATATTGTATTATGATATATAATATATATTATA----TATTGTATTGTGATATATAATATATATG-ATATATTATATTGTGATATATAATATATATGATATATTATATTGTGATATATAATATATATGATATATTATATTGTGATATATAATATATATGATATATTATATTGTGATATATCATATATATGATATATTATAT--TGTGATATATCATATATATGATATATTATATGTGATATATCATATATATGATATATGATATATCATATATCATATATATGATATATGATA chr4 + 94230402 46018503 46018502 46018938 46018503 46018502 46018938 436 TTAAATGTAAGTTTGTATAATTTATTTTCATGTAATATTATGATATGTCACATAGAATAAAAATTATCAGATTATGATTTAGTATCGGCCA-GTATTATGTAATGTTCTAAACTGTTTATTTCTGATTGTTTTCCATAAAGAATAGGAAATTATTTTTTTGCTGTACAA-GTTTATCCCTGTAAAGCTTCTGTAAAAAT-CATAGCACTCAGTGAAAGCCTTTTGCATT---CAAGAAAATTTCCATGCATCTATGTAGTAGGAATATAGAAAATCAGTGATTTTTTAA---------------------GACATTTTATGTTA------ATCCTTGATACTGCATATCATCCAATGAT---TCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA---GTCGTATGTAT-AGATATGATA ...x......xx..:...x..x....x.-..:.x....:.......:.xx:...----------...:.x..:.....x......xx:::.-:......:.x...x.x..x.:.:.x....x:--...x.xx.x:....x:x..x:x.x.....x..:.-.x.:..:..-:.x...-----..x.xx..x.:.x.x:..-:...::.:x:.x.:x.----.x...:...---xx.x.x...x.x:...-..x...xxx:.x.x:.....x..x..xx:....x.x...x---------------------..:..x....:..:------..xx.xx...:x::....:..x:x:....---.....x..xxx....:x.....--..........x...x.....::....x....:.:.x.x..x.....:.xx.:...x:......:.---:..:...:...-.x........ 28M1I25M10I27M1D31M2I34M1I9M1D6M5I18M1D16M4I9M3D16M1I40M21D14M6D29M3D22M2I65M3D11M1D10M 271/410 66.1% 436/94230402 0.0% 66/410 16.1% 127464857 62749698 +3942 chr4 + 190214555 173483662 173483661 173483834 173 ATATATAATATATATGATATATTA-----TATTGTGATATATCATATATATGATATATTATATTGTGATATATCATATATATGATATATTATATG---TGATATATCATATATATGATATATGATATATCATATATCATATATATGATATATGATATGTAATATATATA-ATATATATAATA chr4 + 94230402 46018761 46018760 46018938 46018761 46018760 46018938 178 ATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTA-ATCCTTGATACTGCATATCATCCAATGAT---TCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTAGTCGTATGTATAGATATGATA .....x..x..xx:....x.x...-----.x..:..x..-...x.xx...:x::....:..x:x:....---.....x..xxx....:x......---........x...x.....::....:......x.x.x..x.....:.xx.:...x:....:.x.xx::...:-...x....:... 24M5I10M1D29M3D23M3I71M1I12M 117/169 69.2% 178/94230402 0.0% 13/169 7.7% 127464901 62749654 +5545 chr4 + 190214555 173483736 173483735 173483962 227 TATGATATATTATATGTGATATATCATATATATGATATATGATATATCATATAT---CATATATATGATATATGATATGTAATATATATAATATATATAATATATAATATATAATATATATTTCATATTACATATG------TTATATATATTTCATATAATATATGTTATATATATTTCATATAATATATGTTATATATTTCATATATAATATAAATCATATATAATATATTATA chr4 + 94230402 63976862 63976861 63977089 63976862 63976861 63977089 228 TATTACATACTTTATCCTTTATAGCAAATGCA-GATGTATAA-ACATAAGATAAAGACATACATATG-----TAATATGCCATGCATATATTGTATGGTATTTATAATATATACTACATATTTTACAATATACATGTAAATTTTAACTATAGACTATATACTACA-GTTTTATATGACTAACataaattatttgatatttattttaaattatatatattttagacattatattata ...x.:...:.x...x:xx....x..x..::.-...:...:.-.:..x.x...x---....:.....-----.:.....:x..::.....x.:...:xx..x...........x..:......:.:.x..:.:...------...xx....xx::.....x..:.-...x.....:x:.x.:....xx...x.x....x.x.:x..x..x.....x..:x..x.:.x......... 32M1D9M1D11M3I10M5D64M6I23M1D70M 152/219 69.4% 228/94230402 0.0% 17/219 7.8% 109506874 80707681 +3483 chr4 + 190214555 173483749 173483748 173483898 150 ATGTGATATATCATATATATGATATATGATATATCATATAT---CATATATATGATATATGAT--------ATGTA------ATATATATAATATATATAATATATAATATATAATATATATTTCATATTACATATGTTA---TATATATTTCATATAATATATGTTATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTT----TCTTATATGTATTCAAATGT-TGATATTTAATCAGCTTAAATTTATCTCACATGTATATACTACATATTATATATACTATATACAATATATT---TATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA ....::.:.:....xx...x:....x.----.x.:....:.---..x..:.-......x.:..--------..x..------..:......x..:....x.......x......xx.......---.....::...x.x.---.....x...x:...x:.......x... 27M4D10M3I7M1D11M8I5M6I41M3D14M3I27M 108/142 76.1% 162/94230402 0.0% 28/142 19.7% 147163566 43050989 +3680 chr4 + 190214555 173484053 173484052 173484139 87 ATACATAATATATAATATACATGATATAATATATAATA--TACCATATATAATATATAATATATAATATACAATATATAATATATAATA chr4 + 94230402 46018831 46018830 46018917 46018831 46018830 46018917 87 ATAGATCGTATATGGTATA--TGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA ...x..x:.....::....--..x.:.:......:...--..:x::.............x.x..........:..:...:x.....x.. 19M2D17M2I49M 65/85 76.5% 87/94230402 0.0% 4/85 4.7% 127465222 62749333 +3143 chr4 + 190214555 173484062 173484061 173484146 85 ATATAATATACATGATATAATATATAATATACCATA--TATAATATATAATATATAATATACAATATATAATATATAATATAGAATA chr4 + 94230402 46018831 46018830 46018917 46018831 46018830 46018917 87 ATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAATATACAGTACATAGAATATATTA ...x.x::..:...:....xxx.:.:.....:x...--...:::.............x.x.:......:.:..:...:x...x.x.. 36M2I49M 59/85 69.4% 87/94230402 0.0% 2/85 2.4% 127465231 62749324 +3770 chr4 + 190214555 173484649 173484648 173484822 174 ATATTATATATTATATATAACATGATGTATAATATATATT-ATATATT-ATATGCATATAATACATATTATATATTATATGCATATAATACATATTATATATTATATACATATAATACATATTATATATTATATACATGTAATACATATTATATATTATATATTATACATATAATA chr4 + 94230402 26320183 26320182 26320344 26320183 26320182 26320344 162 ATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAAATGTTGATATTTAATCAGCTTAAATT-TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATC-TA------------ATAGTATATTTTTAGTATTGTATATGTAATA ..:.x:.:.:.:..xx....x..:x.x.x.x....:....-.x..:..-....x:.xx:.::x:.x...-...x.:.:...:.....x..............xx....:.:.xx...:x......:...:-..------------...x.....x..xx:....:..:..:..... 40M1I7M1I20M1D60M1D2M12D31M 110/160 68.8% 162/94230402 0.0% 16/160 10.0% 147164466 43050089 +3666 chr4 + 190214555 173484664 173484663 173484840 177 TATAACATGATGTATAATATATATTATAT---ATTATATGCATATAATACATATT-ATATATTATATGCATATAATACATATTATATATTATATACATATAATACATATTATATATTATATACATGTAATACATATTATATATTATATATTATACATATAATATATATTATATGTACAATA chr4 + 94230402 26320179 26320178 26320344 26320179 26320178 26320344 166 TGTAATGTAGTGTGTCATTAATAAAATATTTTCTTATATGTATTCAA---ATGTTGATATTTAATCAGCTTAAATT--------TATCTCACATGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA----GTATTGTATATGTAATA .:...::.::...:.x..xx...xx....---x.......:..x:..---..:..-....x.x..xx..x..x.x.--------...x.:.:..::.....x..............xx....:.::xx...:x......:...:xx...x....:x.x..----:....:...:.::.... 29M3I15M3D5M1I20M8D76M4D17M 111/162 68.5% 166/94230402 0.0% 19/162 11.7% 147164485 43050070 +3186 chr4 + 190214555 173484828 173484827 173484973 146 TATATGTACAATATATTATATATAATATATATTATGTATATTTTATATATTATATATTATATACATA-TATAATATACATTATGTA------------TATTTTAGATATTATATATTATATTATATATTATATATAATATTATATATATTATATATAA chr4 + 94230402 26320261 26320260 26320417 26320261 26320260 26320417 157 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATAGAGTGGGCAGCCATCATTACAGATCCTTTTTA--GTATGAAAAATTAAGTGTGATTTTATTCCTAAAATGTAAAA .:...:...x.:............x......:x..:...x.x....:...:xx...x.....x:x..-...x:....::.x..:x.------------:...x:....x:.x.x..--:...x.x.x....x:.:.:..x....x:x..xx..:..x.. 67M1I18M12I18M2D41M 96/144 66.7% 157/94230402 0.0% 15/144 10.4% 147164567 43049988 +3214 chr4 + 190214555 173485078 173485077 173485221 144 ATATAATATATTATATATTATATATTATATATTATATAATATATAATATATCATATATATTACATATAATGTAATATATAATATATTATATATATTATATATTACATTATATGTAATATATATGATATATTATATATAGGATAA chr4 + 94230402 46018761 46018760 46018894 46018761 46018760 46018894 134 ATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTA----------ATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATAAATATGGCATATAATATATAAAAGATAA .....:x.x..:.xxx...x.x..xx.:..x....:.x.----------...x.xx...:.:.....x..x:...:xx.x...x..::.....:x.....::.:::x......xx.x....:xx.....x......x.:..... 39M10D95M 87/134 64.9% 134/94230402 0.0% 10/134 7.5% 127466317 62748238 +3372 chr4 + 190214555 173487972 173487971 173488032 61 GCACCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCGCTTGAGCCCCAGAGGC chr4 + 94230402 76033206 76033205 76033265 76033206 76033205 76033265 60 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAA-CCCAGAAGC ....x...:..:...........::........x.x..x...x.:.....:-......:.. 51M1D9M 48/60 80.0% 60/94230402 0.0% 1/60 1.7% 97454766 92759789 +3413 chr4 + 190214555 173491184 173491183 173491237 54 TGAACTAATACAGA------ATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTAACAG chr4 + 94230402 6554002 6554001 6554061 6554002 6554001 6554061 60 TGTATCAAAACAGATTTGTTATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGGTAG ..x.::..x.....------...................................:::.. 14M6I40M 47/54 87.0% 60/94230402 0.0% 6/54 11.1% 166937182 23277373 +3238 chr4 + 190214555 173493482 173493481 173493547 66 GTGGCGCGTGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:..::.--......:...........::........x.xx.x...x.:.....:..::.:.. 10M2D54M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 97460281 92754274 +3141 chr4 + 190214555 173498723 173498722 173498778 56 TGTATATGTATGTATATGTGTGTGTGTGTGTATGTATAGATGCACACATATATACA chr4 + 94230402 73998027 73998026 73998082 73998027 73998026 73998082 56 TGAATGCGTATGTATAAGAGGGTGTGGGTATGTGTATAAATGCTCACATATAAACA ..x..::.........x.x.x.....x..:.:......:....x........x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 99500696 90713859 +18299 chr4 + 190214555 173519211 173519210 173519701 491 CTTTTTCAGTTTCACACGAAGAGACTTGGAGTATCTGGAGAAGGTTTTTGAAGACGTTTAGGAGGGAGGGTG--------AGTTTTCTGCTGAGAAACTCAATCTGCCATACAGTAGCGGCCCCATCTGGGATCTGTCACTGCTGACAGCACCAGAGGGCACAGCCGTGATCTTCTGCACAGC-CTGC-ACTCCCCGAAATACCCTCCTTAATCAAAGGATGTCT-------------GCGCGCCT-------------GAGCTCAGCTGACC----------------------GCGCCGGGAGCACCAGGGCCGTTGGATTCCACCCCAGCCCGCCCCCTCCCCA---------CGCACACAGCCACGGCCCCTCGCGTCTTCGCGGCACGTTAATTAAATGCGGAAAACAGACAGAGGCTGATGTCATTGCTCTCAC------AAGATCATAAACGTAAAAGAGTCATCCTGTGAGAATCCCTGAAAATGACTTTAATGAATAATTTCAGAGACAGTTATGACTTTGGGTGATTACTGAGCAAGAATATGAAAACCAGATT chr4 + 94230402 44829889 44829888 44830402 44829889 44829888 44830402 514 CTCTCTCCGCTGGAGCCGAAGTGACCCGCAGTATCTGGAGAAGGTTTTTGAAGACGTTCAggagggagggagggagggagAGTTTTCTGCTGAGAAACTCAATCTGCCATACAGTAGCGGCCGCGTCTGGGATCTGTCACTGCTGACAGCACCACAGGGCACAGACATGATCTTCCGCACAACACTGCAACTCCCCAAAATACCCTCCTCGCTCCCAGGGTGTCTGCCGGGCTGCACCGCGCGCCTCCTCCAAAAGGGGGAAATCGGCCGAGCCCCGAGCAGCCGAACATCGCGAGCGGGGCGAGAGGCAGCACCCCCGAGTCCCCCCCC--TCCACCCCCTCCCCAGCTATTGGGAGCACACCGCCGGGGC---------------------------------------------GAGGGCGATGGCA-CGCCCTGCCGGTGCAAAGGTCGTACATGTAAGCGCGG-GCGCCGTGAG-ATCGCCGAGAATGACTTTAATGAATAATTTCAGAGACAGTTACGGCTTTGGGTAACTACTGCGCGTCTCTATGAGAACCGTATT ..:.:..x.:.xx.xx.....x...::.x.............................:...........x.--------..........................................x.:.............................x.........x.:........:.....:.-....-.......:............::x..xx...:.....-------------........-------------..:x..:..:..x.----------------------...xx.x...x:x...x:..x::.::.:..x....--:..:...........---------x......x...:x...---------------------------------------------....x:....x..-:..:..xx.------...:..:..x.:....:x.x.x-::x.:.....-...x.:..:.................................:.:........:.:.....x..:xxxx.....:....:x... 72M8I103M1I4M1I36M13I8M13I14M22I35M2D15M9I16M45D13M1D9M6I22M1D10M1D84M 352/441 79.8% 514/94230402 0.0% 123/441 27.9% 128689322 61525233 +10231 chr4 + 190214555 173522279 173522278 173522599 321 GATTACACCCAACTCGGCTGGGATGGCTCCGAGCCGTCTGCCCTGACGTCAGCGAGGCTCCGGCCCCGCCGCGGCAAGATAGGCG-AGCGCGGCCGGGCGCGGGTGCGGCACTAATCACTCCCAGATGTCCCTAATAGCGGAGATAAAGACGGACAGAGCGGCCGGGAATAAATTTGTAATCAGGGCTCTACCATCTGATCATCAAAGCGGCCCAAATGCCGGGAGAATTTGAAGGGAATGCGTGTGAGGGGGGTCGCTTGGGGGAAGAGGTGAGGGTGCACTTCGCGATGGGAACTGGCTTCGGTAGGGTAGAGCAGGGAG chr4 + 94230402 44832895 44832894 44833187 44832895 44832894 44833187 293 GATATCACCCAG---AGCGGGGATGGTTGGGGGCCGCGTGCC-----GTCAGCGCGGCTTCTGCTCCGC-GCCGCGAGATAGAGGCAGCAGGGCCGGGGGAGGG--AGACCCTAATCGTTCCCAGATGGCTCTAATAGCAGATATGAAGACTTACGCAGCGTCCGAGAATAAATTTGTAATCAATGCTCTACCATCGGGTCATCAAAGAGGC---GACACCGGGA------GGGGAAAATGAGGGCGGGGAGCGCC------AGGAAGAGGC--AGACGCACACGGCAGCGGG-GCGGGATGGGGTACGGGGCAGCAGGGAG ...xx......:---:..x.......:.xx.:....:x....-----.......x....:.x..:....-..x..:......:x.-...:x.......x.x...--x.:.x......::.........x.:........:..x..:.....xx..:x....x...:.................:x...........x.:.........x...---:.::......------.::.::....x.x.:.:..:.x.:.------:........:--:.::....x:x..:::...-:.x..x.xx....x..x:x......... 12M3D27M5D22M1D15M1I18M2D106M3D10M6D25M6D10M2D19M1D28M 214/292 73.3% 293/94230402 0.0% 30/292 10.3% 128689384 61525171 +10142 chr4 + 190214555 173524068 173524067 173524305 238 TTATCAGACGCTGGGCCT-GCACAGCGGTCTGGGGCAGAGCCCTGACAGCCAGATCTACCATCAATTTACCTTCCGCCGCCGCAGCTTCCCATTTAGCTTTTAACGTCAAATCCTACATTTTTGTCGGCTCCGGCCTGTCTAGAACGCTTGTGATTTCCCTGCAGGAGTGATTGCTCTTAACAAAATGGCAGCAACCACATTATCCGAGCAATTAAAACAGAGGCCTTTTAGCCGGTCC chr4 + 94230402 44834286 44834285 44834498 44834286 44834285 44834498 213 TTATCAGTCCCTCCGCCTCGCAGAGCGG----GGCCGGAGCGCTGACATCCCGG-CTACCATCAATTCACCTTCTGCCGCCCCGTTCCCCCATTTAGCTTTT--------------------TGCCGGCTCCGGCCTGTCTAGAGCTCTCGTGATTTAGCTCCGGGAATGGCTGCTCCTGAGAAAACGGCAACATCCTCACTA-CCGAGCAATTAAAAGAGAGCCTTCTTAGCGGGTCC .......x.x..xx....-...x.....----..x.:....x......x..x.:-............:......:......x.:x:::..............--------------------..:...................:.x..:.......xx..x.:...:..::.....:.:.x....:....:..x..x..:..-..............x....x.:.:.....x..... 18M1I9M4D22M1D47M20D81M1D35M 169/212 79.7% 213/94230402 0.0% 27/212 12.7% 128689782 61524773 +4921 chr4 + 190214555 173525159 173525158 173525283 125 TGCTATAAACAAAGGCAAGTGTCTGTAAACACAGCCCCGCGCCCACCAGGTCGGCCCAGCGCCGGCTGACCCA-AGGGGAGAAAGTTCAGATCGCTTTGGCCGAGTTGTTCTAACCCCTCGCCCTC chr4 + 94230402 44834729 44834728 44834850 44834729 44834728 44834850 122 TGCTACAAACAAAGGCAAGTGGCTGTAAACACGGCCCCACGGCGGAGCGCACGGCC--GGGCCGCCTGACCCGCCGGGGAGAGGGCACGG--CCCTTTGGTCCCGTTGTCGTAACCCCGCAACCTC .....:...............x..........:.....:..x.x:xxx.xx.....--.x....x.......:-x.......::.:x.:.--.x......:.xx.....:x.......x.:x.... 56M2D15M1I16M2D34M 91/121 75.2% 122/94230402 0.0% 5/121 4.1% 128690430 61524125 +30906 chr4 + 190214555 173526470 173526469 173527429 960 CACTGAGTCTTTAAAATAAAGTTAGAGGCAATCATGATAATTTAGTTTACTTCTGAATATTTTAAATATTACGAAAACAAGT-ATAA-CAGCTTTGTTTTCAAAACTCTTTTGAGGTATCAGCCATTAAAAGATTAAGGTTTTT--------------------------------------------GTAAAAAAAAA-ACACAGTGGTTTATTGAATACTTACAACGTTTACACCTTCAATATTAATTAAATTCCATTTAGTTTTAGA-GGACGGAAGTGCACAAAACAAGTGGCTGTTGGAAACATCTTCAAAGAGGGAACGACCACAGATGAATGGATAGCACTAGATACCGACCCCAACGGAAATGTTAGCGGCCCTGTTTTCTGCTTTGAAATAAAACTTTATAATACCCAGGAATATTTATATCCAAA-GGCCAAGTATTAAAGATACACTTCACAAACGCACTAGTGCC-----------------------CACTGTCTTTATCTGGAAGGGGTTGAGTAGGTTGGCGGGGGGCAACGCTGGTGTCTACACAGCCAAGAGGGAACATTCACGCACACAGAATCTAT--GAGACGACGGGATCCCTTACCACACGGGAGTGTCCTCTTCGTATTAAAATATGGAATGCTTTT----------CTTCAAATATCCACTTTTTTTTTGGAGGGGGAGACGGGGAGCAGATGCCTCAAAGGGGGTCAAAGAGAGGGGAAGGAAATTGCACATAAATAAACCGGATGATTCCAAATGCAAGGAGTCCTCAGAGCGGAGCGCGGA-CGGCTTTTCCGGAGTCCTGGGTCTGCATCTGGCGCCTTGGCCCCTGCTCACTCGCGCTCTCCTCCTCCTCCTTCTCCTCCTCCTCACTGCTTGAGCTCCAGGGCCCAGACGTGCTGCGGCCAGCCCGTCCGGCCTTTGGTTTTCTTGTCGTTGCTGCTCACTGTGCTTTTCAAGATTTCGTTCTGGACA-----GAGGAAAGGCGAGGGCGAGAAAAGTGGAAAGAGAAATTCAGAGAGGA chr4 + 94230402 44835370 44835369 44836275 44835370 44835369 44836275 906 CACTGGGT--TAAAAACGAACCTCGGAGCCATCTTTATAATTTAGTTTACTTCCGAATATTTTAAATATTATGAAAAAAAGCCATAAACAACGCTGTTATTCAAAACATTTTGAGGTATAAAACATAAAAAGATTTGGGTTTCTTTCCCCGCCCCCCCCCCCTCTATTTTCTTTCTTTTTTTTTTTCCGTAAAAAAACACACACAGTGGTTTATTGAGTACTTACAACGCTTACACCTTCAATATTAATTAGATTCCACTTTTTCCCTTATGGACGGAAGTGCACATAACCAATAACTGCTGAAAACACCTCAGAATACCGAACAACCACAACAAAATC-ACGACACGAAATACGGAGCCGACCG--AACGCGGGTGCAACTGCTT-CTG--TTGAAATAGAACTTTATAAT-CCCAGGAATATTTATATCCAAACGGCCAAGTATTAAAGATACACTTCACATACACACTAATGCCAGGGAGGGATTTTCCTTTTTCTCCTTTCTCTTCCCCT---ACGGTTCTCTT---TTCCCCGTGGGC--------TTTATACACAGCAAATA----ACATTCACG-------AAACTATTAGAGACGTTATTACCCCTTACCAAGCCGGAGTTTCCTCTTCATAGCCATCTATGGAATGCTTTTTTCCCCTCTCCTTCAAATATCCACATTTT------AGGGGGGGGTGGGGGG---------------------------------AGAAATTGCACATAAATAAGCGGGATGGTTCCGAACGCGAG-AGTCCTCGG---GGAGCGCCGAGCGG-----------------------------------GGCCCCCGC-----CGCGCTC--------------------------ACTGCTTGAGCTCCAGCGCCCAGACGTGCTGCGGCCAGCCTGTCCGCCCTTTGGTTTTCTTATCGCTGCTGCTAACTGTGCTTTTCAAGATTTCGTTCTGGGGAGACAGGATGAGAAGGGAGAGAGAGAGAGGGGGAAACA-AAGCGGGGAGAGGA .....:..--.x....::..x:.x.::..x...x.x.................:.................:.....x...:-....-..:.x:....x.:x...x:x...........x.:x...x........x:.....:.--------------------------------------------.........x.-.................:...........:.....................:......:..xx.:::xx.-...............x...x.:.::...:..:.....:..:x:..x.xx....:......:xx:...x-.:::...x.:....x..x..x.x..--..:.:x:.:.xxx...:..-...--........:...........-......................-...........................x..:.....:....-----------------------.x:.x....:x:..---.x..x.:xxx.---..xx.x.x....--------.x.x........x..x.----.........-------..x....--......x::xx.:.........x:.x.....x........:..x:x.xx..............----------..............x....------......:.::....:.---------------------------------:..................:.x.....:....:..:..:..-.......:.---.......x..-...-----------------------------------......:..-----.......--------------------------................x.......................:.....x..............:...:.......x...........................:x.-----..x..:.:.x...:.x....:.:.x.....x.-..::xx:....... 8M2D72M1I4M1I56M44I11M1I70M1I68M1D25M2D19M1D3M2D20M1D22M1I41M23I14M3D11M3D12M8D17M4D9M7D7M2I63M10I19M6D16M33D41M1D9M3D10M1I3M35D9M5D7M26D104M5I32M1D14M 655/816 80.3% 906/94230402 0.0% 234/816 28.7% 128691100 61523455 +44815 chr4 + 190214555 173528684 173528683 173529325 642 CCAGTTCCC--TGACCCCCTCAGC-----CCCACCGCCTGCCGCCCCCTGGTACTGACCAGCTCCTTCTTCCTCTTCTCCTCTTTCACGTCGGTCTTCTTGATCTCTGCCTTGAAGGCCTCCGCCTCGCCATTCTGGTCGTCCTTGGCCAGCAGGTCCATGAGGTAGGCGATGTAGCTGGTGGCCAGGCGCAGGGTCTTGATTTTGGAGAGTTTGGTGTCGGCGGGTACGTTGGGGATGCACTCGCGCAGTTCGGCGAAGGCGCTGTTGATGCTCTGAGTCCTGCGCCGCTCCTTGCGGTTGGCGGTGCCTCGGCGCTTCACCGGGCGCGGCCCCCCCAGGCCCGGGGGCCCGGCGCCCGGCGGCACCCCCCCGTAATGGGAGTGGTCCAGGCCGGCGGCGCCGCTGGCATACTCGGGGCTGTAGGACAGGGCCATGCTGTAGTCGGGGGGCGACATCTCGGGGTG---GCCGATGAGCCAGCCATGGAAGTAGGGGTTCTCCTCATGGCTGCAGCGGCTGGCGGCGGCGGCGGCAGCTGCGGCGGCGGCGGCGGCAAACGGGTAGCCCTCGTGGTGCACCACCGGGTGGTGGGGAAAACCACCTACCAGACTCATTTCGCCCTCCGCGCCCCTCCACGCGCCCCAGCGTGC chr4 + 94230402 44836634 44836633 44837269 44836634 44836633 44837269 636 CCAGCTCCCGCCGCTGCCCACAGCGAACCCCTCCCGCCT--CGTCCCGCGGTACTGACCAGCTCCTTCTTCCTCTTCTCCTCCTTCACGTCCGTCTTCTTGATCTCTGCCTTGAAAGCCTCCGCCTCCCCGTTCTGGTCGTCCTTGGCCAGCAGGTCCATGAGGTAGGCGATGTAGCTGGTAAACAGGCGGAGGGTTTTGATCTTAGAGAGCTTGGTGTCGGCGGGCACGTTGGGGATGCACTCGCGCAGCTCCGCGAAGGCGCTGTTGATGCTCTGAGTCCTGCGCCGCTCCTTGCGGTTCGCCGTGCCCCTGCGCTTCAccggccggggccccccgagcccgggcgggccgctcccgggcggcacccccccgTAATGGGAGTGGTCCATGCCCGGCGCCCCGTTGGCGTACTCGGGGCTGTAGGACAGAGCCATGCTGTAGTCGGGGGGGGACATCTCCGGGTGGCTGCTGATAAGCCAGCCGTGGAAGTAGGGGTTCTCCTCGTGGCCGCAGCGggtggcggcggcggcg------gcggcagcggcggcggcgAACGGGTAACCCTCATGGTGCACCACCGGGTGGTGGGGGAAGCCGCCCACCAGACTCATCGC--------CGCTGCCTCGCGCGCCCCGGCCCGC ....:....--:.x:x...x....-----..:x......--..:...x:.................................:........x.......................:...........x..:..................................................::x......x.....:.....:..:.....:..............:.......................:..x...............................................x..x.....:.x............x..x........x..x..x..x..x...x:x..x...............................x...x.xx..x...:....:....................:....................x........x.....---..:...:........:....................:....:.......x..............------.....:...........:........:.....:.......................:..:..:..:...........:x.--------...:x.::.:........:..x:.. 9M2I13M5I10M2D425M3I64M6D80M8D25M 550/626 87.9% 636/94230402 0.0% 26/626 4.2% 128692050 61522505 +15404 chr4 + 190214555 173530082 173530081 173530548 467 GCCTTGGAGCTCGAAGACCGCGGCTCGGGCTCT------------CGGAGGGCTC--TGCGCGGTG-GCCGAGGAAGCTCCGGGGTGACGGCGGTGGTTCTCCTGGGCTGGACGACGTGAGGGGAGCAAGCGGATTTTCCCAGCAAGATCTCCATGTACAGCTACATCTTTAGGGCCGCTCGGGTTAATATATGTCGTCAGAGGCTCCTCACGCCAATCCCGGGGCGGCAGGGGCGGCGCCTCGAGCTCTCGGCAATAAAACTTTTTGATGTTCACGTTGCTAATTGCCGAGGTCCTCTTCCAGGATTGGCTACCTCCTCATAACCATAAGATAATTAAAACTTGGCGGGGGGGGGGGGCAGGGTTAAAAAAACTTTTTTTAT-CAGTCAGAGGATAATGCAAGTGTTTAACAGATGCTTCACTATTAAAATATTTTC-------------------------CCCCCAAGTCTCAAATATTGAAGAATCTCTAACCAGGTACAGTAT chr4 + 94230402 44838403 44838402 44838887 44838403 44838402 44838887 485 GCCTTTGCGCTCGGGGGCCGCGGTCGGCGCCTCTCCGCTCCGCTCCGCGGGGCTCAGTGCTCAGCGCTCCGCTGGGACATcgggcgggcggtggcgg-----cggggctcggcgcggcccggggcACTGGCAGGGCTCCCCGGGCCGACCTCCATGGACAGCTACATGTTTAGGGCCGCTCGGGTTAATATATGGCGTCAGAGGCGGCCACCGCCAATGGCTGC-CGGCGGGGGCGGAGTCCTCGGGGCTCCGCAATAAAACTTTTTGATGTCGGCCCCGCTAATTGCCGCGCTCCTCGGCCGGGATTGGCTGCCCCTCCGCATCCAGAGCGTAATTAAAACGAGGGGGGGGGGGGGGGGAA--------------TTGTCATGGAGGCAGAGGTTAATGCAAGTGTTTAGCAGATGCCTTACTGT---AAAATCTTCGTTAAAAAAAAAAATAGCAACAAAATCATTAAAACTTATATATCGGACAGTCCCGAGCCAGGTACGGTAT .....x.x.....::.:......::x.x..:::------------..x:......--...x.:.:.-x...xx.:::.x:....xx.:...:..:..-----.x.....x.:..xx.:xx....x:.x:..:.:x:.:...:.xxx..:.......x..........x..........................x..........xx.:xx.......xx.x.x-....:.......x.:.::x:.xx...x....................:x:.x::...........x.x.....xx..:.........:..:.::.::.x...x.:x:..........xx..x............x.:--------------..x.:..-x..x......x...............:.......:.:...:.---..x..:...-------------------------:.x::..:x..:.x....:.:.x.:..:.x.:........:.... 33M12I10M2I9M1I30M5D122M1D137M14D7M1I42M3D9M25I45M 316/444 71.2% 485/94230402 0.0% 64/444 14.4% 128691679 61522876 +3699 chr4 + 190214555 173531058 173531057 173531559 502 CTGGTTTAACTAGCCTGTTTGGTAAGTAACTGAATATTTTTTACGGCGTGTTCAGAGCTTATTTTCCAGTTTTTATGAACAAACATATAAATATATCTCTGCATTCCTGCCTCCC--TCATAAAAGCGGGCATCTGTGGAAAGCAGGTTTAGTTATCGGAGGGGAACCATTAAACGCCAGTTTAAGAGGCAGGCCGGGAGGACGGCTCGTGGATGTTGAGACTGCTGGCCTTGGTGATCTTGAACGCATTATAACGGAAAATGGATCTCCACTTGTAAGTCACCGGGCCGCGGGGCACCCGGGCCGCAGCGCCCGTGTGGCATGAGCTTCTTGAGAAGGCTCACGTGCGGCGAGGGCGGGTGGTAAATGGCAGGAGCTGAAATCACCCCAGGCTTGGCCCCAAGCCGAGAGGGGAGGCTGAT---GTGTATATGCAGATTCCACCC------GAAGGAGTTCGGTGTGGAAAACGGTGTCAACAGGAGCCCGCGGGCTGTAAATTAGAGGGAG chr4 + 94230402 44839243 44839242 44839647 44839243 44839242 44839647 405 CTCGTTTAACTGGGCTCGGCGGTAAGTCACAGAATCTTCCTTACAGCGTGTTCGGAGCCTGCCTCCTCGCCCTTAGCGACAAATACAGACACTTTTCTCCGCGTTCCCGCTCTGCGGTGAAAAAGAACGGAGCCCGTGGGAAGCA----CAGTTCCAGGTG--------TTTGAC-----TTTGAGGGA------AGGAAAGCGGACCCT--------AGGCTGCAACCCGCGGAGAGCT---------------GGGAGATGAGGCC-----------------GACTGCTGTTATCCTCAGACGGAGC------------CGAGCATC--------GCTCAACTGTGG------------GGAAATACCA--------AATCCCCACCCTTCTGCGCACTGCCCGACGGCTGAG-CTCATTCGGCGTATATTACAATGCGACCCCGCACTGTAGG----CAGTGAGGAAAACTGTGTCAACAGGAGCCGAGAGGTCGTAAATTAAAGAAAG ..x........:.x..xxx:.......x..x....x..::....:........:....:.:::.:.:x.:::...xx:.....:.:.x.x.:x.x....:..:....:..:::x.--.x.x...::xx..x::.:....:.....----:....x:x..x.--------..x:..-----...:..:.:------:...:::...x:.x.--------..:....x:x..x:..x..x..---------------..:.:...::x.:-----------------.:.:..x.xxxx..:x:.x..x...------------:....x..--------.....xx..:..------------.x....:x..--------....x..x.xxx::..xx.x.x:x....x:.xx...-..x..---.:......xxx:..x.x....------.x...----.:...x.......x...............x:x:..::........:..::.. 115M2I28M4D12M8D6M5D9M6D15M8D22M15D13M17D25M12D8M8D12M12D10M8D36M1D5M3I21M6I5M4D52M 253/394 64.2% 405/94230402 0.0% 119/394 30.2% 128691815 61522740 +22180 chr4 + 190214555 173536138 173536137 173536546 409 GATCCGGCAGACTGAGGTCTCCTTGGTAATTTGGGTACACCAAGTCTCCAGTTAATGATAGATAATCAGCCTTTGGGTCATTCGGTCATTCTCTTATTACAAACCCCTCCTGCTCTCTCTGATCTCCTTTCAAACTAAATTTCACACAAACAAATAAAGCAAGACAGGGACAAGTTCTTAAAAAAAGAGAGAGAAATATTAGA-AACGCCTGATACAGAACTCTAAACA---AGGAAAGGCAAGCTAAAAGAGGATAGGAAAGAACATCTTATC-AAAATGAACATGTTGTGTACAAAACATTAAAAGAAAAGGCTCTGGTTTTTGTT-AAAGTGACAGAAAATTAAAATAAAAATAATTGCAGGCACCAAAGTTAT---AAACAGGGAAGGCAGGATGC-TAGCTGGAAATGCGCAGC chr4 + 94230402 44843389 44843388 44843804 44843389 44843388 44843804 416 GATCTGCCCGAGTGAGGTCTTTTTGGTAATTTGGATACACCGAGTCTCCAGTTAATGACATATAATCAGCCTTTAGGTCACTTGGTCATTCTCTTATTACAAACTCCTCCTGCTCTCTCTGATCTCCTTTCAAACTAAATTTCACACAAACAAATAAAGCAAGACAGGGACAAGTCCTTAAAACGCGAGAGAGAAATATCGGAGAATTGCTCGTGGGGAACTATAAACATTTTAAAAAGAGAACCCGAA--AAGATAGGAAGGAACATCTTATCGAGAAAGAGAGCATTGTGTACAAAGCA-CGGGGGAAATCGGTCTGGCTTCTGTTAAAAATGACataaaattaaaataaaaataattaCAAACAGAAATGGCATAGCAGAAACAGAGGGCAGGAGGCTTTACTGGAACCGCGCGAC ....:.x.x..x........::............:......:................:.x.............:.....:.:.....................:......................................................................:.......x:x.............::..-..:xx..x:.:x:.....x......---x::....:x..x.::..--.:........:............-.:..x..:x:::...........:..-:::::....xx.x.....:..:....-...:.....x.....................:..::..xx..x.x:..---.:.x.x:..:.......x..-.x:......x:....::. 203M1I25M3I17M2D23M1I26M1D26M1I48M3I20M1I18M 327/406 80.5% 416/94230402 0.0% 13/406 3.2% 128692749 61521806 +21041 chr4 + 190214555 173538391 173538390 173539545 1155 CAGGAGGCCGGTTCTCCGCCGCTCAGGCTGGGAGAGGTCACCGCTCCGGGCAGGGTGGACCCCCAGCTCC----GTCTCGGAGGA--CCTTTCGCCGGAGGCGAGCAGGAAGGGGTTAACCATGAGCCTCCCACCCTCACCTCCCAGACCCTGGTGCCGGGCTAAGGCCTCCGCTTCCCTCCTGAGGTCTCATTAGG-AAACCCTCACCGCTATTTTCAACATTTCCTCAATCAAGTGCCTTTAAATAGAGCTGCACAAACAGATTGGCGGC-AAAAGCGTAGATCTTGTCACGATTGAGACCAATCCAGTATTTCAGCCTTGTTTGCTTTGCAATTACGGGTTGGCTTGTGGCTACGGTGCCACCGGGGCAAA--TCTGCAGCCGCTCGCTTTCTCCTCTGCGCTCCGGGCGGGTGGAGGAAGCGACCCGCGGAGTCACTGCAGGGAGG---AGAGGGGGACGCGCGCGGGGGGAGGCGGCGGAGGGCGGAGGAGACTCGCTTGCACCCCAGGGCCGCGGGCACGCAGAGCTGTGTTGAAGGACATACTTTTCAGGTTCCTGACAGTCACTGAGCTATACGCAATAATAAAGTGCGTGATTCGCGTGTGGAAACCAGTGTCGTGTCCTTACCAGCTTCCTTTTCTGTCCACCTTCCCTCTCTCTTCTACCTCCGTTTCGCTTTTCTTCAGTGCATGTTAGCGGTTTGCTGGATTTCCCTTCTCCCTCGCTGTTCAACTGCTAGCATGATTTGTTACATTTTCCACAGCTGTTTATTCTTGTTTGACTTTTTGTACAAAGTCACTTTAAATCTGCTGCAGAAAGAATAAAGCACCTAGC--CCTTTGGATGGACTCCTGCAGGCGTGTGGCTGTCCCTGGCCCACTTTTAATTCTTTGGAGATGGCTCTTCTGTGTAAATCAGCTG---CTGGGTGCGTTCGGTCACCTCGTAGGCCAGC--CTAGTTTGTATCAGC----AGAACAGTAGTGGACTCGACTCAGGTCGTAAGCCTTATATTTCACAGACAATTAAATCTTGGCTGCTGTTGAACAAAACTGTAATATTTACTTTGTTCTATACCGAGAAGCAC-TTTTAAAGTAAAAAAGAAAAAAAAACCAAATACTACACTTCAAAAAGAAAATATGACAATGAATCTCTTTTTATGGATTCTCTCT chr4 + 94230402 44844859 44844858 44845846 44844859 44844858 44845846 988 CAGGAGGCCCGCTGTCCCCCGCT----------------GCCCCTC--------GTCTTCCCGCGGCTCCCCCAGCCCCGGAGGAGCCCCGAGGCCTGGGGGTGGCTGGAAAGTGTTAAGCGCTGCCCCCTCCTCCTCCTCCTCGAGCCCCCTG---------AATGCCACTGCTTTCCTCTAGAGGTCTCATTAGGGAAACCCTAACTGCTATTTTCAACATTTCCTCAATCAAGCGCCTTTAAATAGAGCTCCACAAACAAATTGGCGGCAAAAAGCGCAGATCTTGTCAGGGGAGAGGCCGCTCCAATATTTCACCCTTGTTTGCTTTGTAATTACGGCCGGGCCGGTGGCTACCTGCCCGCTGGGGCCGGCTTCCCTCGCCCCCCGCTGCCGACACCTCTCCC-------------------ACCCAGCGAGCCGTCCCGGGGGCGGCTGGAGGGGAATAAAC--------AAAAACTAGAGAGCGGCATCGCCCCGCG-----CCCAGCTCTGC-------CCGAGCTCTGC------------------GGCTCCCAGCA---------------------------CGCGGGATTC-CCCCCGCAGCCCCGTCCCGAGGGC-TGCCCCCGCCCGGCTCTGAGGGCCGTCGCTTTTGCT----------TTGCGCGCTTCTT-----------------------------CTCTCCCTCTCTCTGCTAAACCGCTGTTATGATTTGTTATATTTTCCACAGCTGCTTATTCTTGTTTGAC-TGTTGTACAAAGCCGCTTTAAATCTGCTGCAGGAAGAATAAAAGTTAAAACCGCTCTTGGACGGGTTCCTGCAGACTCATGGGCGAGTCCGG-----------GTCCGTGGCGGT-----CCCCGAGCAACGCCGCGGGCCCCGAGAAGCCCCTCCCGCAGCCTGGGGCAGCCGCCCGCTCGCAGCGACAACAAAAATCGGCGCTAATTCAATTAGGGCTGAAGCCCGCGTGTAGCAGAGG----GGAACTTTGGC-GCTTAGGAACTAAGCTGCTATATTCGCTTGGCTATAAACTGACGAGAATATTTTATGGCGGAGGAG-------AACCG-----TACAACACAAAAGGGAAATATGACAATAAATCTCTTTTTATGGATCCTCTCT .........x.:.x...x.....----------------:..x...--------..xxx...x.:.....----.:.:.......--..:xxx...x.:..xx:..x....:.x.....x.::x:x..:.:.x:....x:.::.x..x...:x.---------..x...x.:....:....:x..............-.......x..:...........................:................x........:.........-.......:...........x.:xx...:..:x....:.......x..............:........x:x...:x........xxxx..:.:.....x::--..:x:x...x.:....x:.xx.x.:x.x.:.-------------------....:xx...:.:::x.:...:x.---:......:.::x:.--------.::x:x::...:....x:xx.x.:...x-----.....xx.:..-------.x.....x..:------------------..:...:::..---------------------------:...x.....-.x:x:.x.:x..x..x:..x.xx.-.:..xx.x:..xx:....xxx:..x..x..:.:x..----------..x...x:.....-----------------------------.::..:.:...x...:.x...:...:x:...........:..............:...............-.x..........:.:.................:.........:xx:xx.:.--.::.....:..::........:.x::...x:.xx:.:..-----------x..:x...x.:.-----::.:.x.:..xx.x..x.---.:.:.x:xx::.xx:.:.xx.x.:..x....--.:x.:.:.:.x.::.----.:..:x.xx.:x:.:..:.:.x:..::.x.:x..x::.:.xx..x..:----x:..::.....-...xxx....x..:...:x.....::...x.:.x..x..:..x:..x.:-.....x:.:::.::..-------....:-----....x:x.....:.:............:.................:...... 23M16D7M8D16M4I11M2I67M9D34M1I74M1I101M2I31M19D24M3I14M8D28M5D11M7D11M18D11M27D10M1D24M1D36M10D13M29D70M1D51M2I39M11D12M5D18M3I31M2I15M4I48M4D11M1D49M1I16M7D5M5D52M 651/963 67.6% 988/94230402 0.0% 217/963 22.5% 128693532 61521023 +9644 chr4 + 190214555 173540755 173540754 173541167 413 TATTTTTCTGCATTATTATTCATTAGCCTCTTTGCAAACTCACTAAAATAGAATAGTATTAAAGTATGAATATATAGAGAACAATTATTAGGTTCTACATATTTATTTAGGTAAACCAATGTTATTAAAATTAAAAACATGTGCCTGGCATATAAGTGCTTCTTCAGGAATTC---TTTTTTGGATGCATA---GTTATTATTTTTTAAACAAACTCAGATTTTCAAACACTGATTTTCTTCTCTGAACGGGCATTGCATTGTTTTAAACAGTAGCTCCTGGAATAATGCCACCTTTAGTATTTTAGACTTTCA------------AACAACAATTGGAATTGGATAAATGCTTTCAGCTGGGAGCACTTTCCTAATACCTTTGTAGGTAATGGGATTCTCTATTTG----TGCTGGGTGACAAACGGACAGTGC chr4 + 94230402 44847626 44847625 44848040 44847626 44847625 44848040 415 TATTTCTCC---TGGTGACTCCTGGATCCTTCTGCAAACCCACTAAGAAAGCGTTGCTCCTAAACAGCAACATGCACACAGCAACCAGAATATTTCAGATCTTCATTTCTACAGGCTGATGTTATTAAAATTAAAAACATCTGCTTTG-----------------AGGAATGCAGATTTTCTGGATGTAAATGCTTCTCTACTCCCACGGTAAATTCAACTACTCATGAAACAAAGTGCAATTCTAAACATCCATCACATGATTTTGCACAGTAGCAAAGGGAACAGTGCTTCCCTTACTGTTTCTGTTGTTCAAACAACAAAAACAACAACAATAAAAATAGGATAAAAGCTTTCAGATGAGAGCACGTTCCTAATCCCTTTGTAGGTAATAGAGTTCCTATCTTGTTGCTGCTTTGTGACCATTTGGCCATGC .....:..:---.x:.x.:..x.x:::.::.:.......:......:.x..x:.x.:x::x..::.xx..:..::.x.x.:...::.xx.x:..::.x..x..:....xx::.::.::......................x...:.x.-----------------......x.---....:......:.x.---x.:x:..:.:::xx:::...:...:x.x:...x:x.x::.xx.x.xx:...:...:xx...::...x:....:x........xxxx....:.:...:x..:...x.:...:x.x:x....------------.........x::...x.......x........x..:......x........x..............:.::...::xx:...----....xx.....x.x:x.:.x:... 9M3D136M17D8M3I15M3I120M12I81M4I24M 250/393 63.6% 415/94230402 0.0% 42/393 10.7% 128693129 61521426 +8939 chr4 + 190214555 173541758 173541757 173542153 396 CTTTTTCTGGA-----AGAAACATGGCAACTTAA-CCGTTATTAATCTGGACTAAATAAAACAGGAAACTGCTTCTTTACATTT-----CTAGTAATTTTTTCTGCTTTTCCAAACATTGTTAAGTTCTATGCAACTTGTGCTATTCAAGTAAAGATGATGT-----------CAGTAATAAAATT--ACAGAATCTAATCAAGTGACTATTT-TTGCTTTATTACAAAATTTATGTATTTAATTGGGATGTTTAATTGCTTA----GTTTTTAGAACACTGAATTTTTCTTTTTCCAGACAACAGAGTGATATTTAATGAAGTGCTTATAAAGATAAATACGATGGTTCATCAAAGATAAAATAGTCATAATAACAAGATGGCATTTGAGTCAATGTGGAGTGGACTCTGCTTTGTAAATTATA chr4 + 94230402 44850198 44850197 44850599 44850198 44850197 44850599 402 CTTTTTCCAGTGACTTAAAAATACCACAATTAAAATTATTATTAAACTAGATTAAATGAAGCGGATATTTGTTT--TCAAGTTTTAAAGCCAAGAATGTTCTTTGTGCCTCTGTCCATTTCTGTGCTCCACGTACCCTGGGCTGTTTACACAAGGATTATCTTGTTTATTTTACAGTTATTATGCTTCATAGAAACTAATCAAGAGAATATTTCTTTTTTTATGACAAAAAGT-------------GGATGTTGAATTGCTCAAGTTGCTTTTATACAAC---ATTCTTGGGTTT----GTGATAGTGTGATATTTAATAAAGTGTTTATAAAGGCAGATATAATAGTTTATCAGATCTCAGGCAGTCATAATAACAAAACTGCCCTT-AGCCTGAGTGCTATGTACTATACTTTGTAATTTACA .......::.x-----.:...:.:x:...:.x..-:::.......x..:..:.....:..:.:.:x.x:..:..--.:.x:...-----.:.:x...x..:.:..:x::..::xx....x:.:x.:..:.:.:.x.:..x...:..:.x::..:...x..x.-----------....x..x.x::.--.:....x.........x..x.....-..x:.....x......xx.-------------.......x.......:.----.:.....x.xx..---...:..xxx...----:::.:..x............:.....:........::.:...::..:...:....:.xx.x.:::..............:.:x..x:..-..:.x:x...xx:..x...x.:........x...:. 11M5I18M1I39M2D8M5I73M11I13M2I25M1I19M13D17M4I13M3D12M4D89M1D36M 251/373 67.3% 402/94230402 0.0% 52/373 13.9% 128691560 61522995 +17456 chr4 + 190214555 173547798 173547797 173548207 410 CAATACAACCAAAACTTTAATATGAACCAAAACAAAAATTGGGCTGATTTTATGAGGTTGACTTAAAGTCAGGAAAAGAATGATA--AACTTTTGAGAGGAAGAAAGAAATCATCAAAGCCACGAGGAG---CTCAAAGTGGTGTTTAATAGCAGCTATCACATTGCGCCCGA--GCCTTGACCACTTCTGACGCAGCTGTTTCGTTTTAAGATGTTCCCATTCCTGTTCCACTCACACAGTCCTCCACAGTGACCTGAGTGCACGCACCCAAGCCGGCAGGCCACTCTAGAAAACCGTAAACCCCTCAGAGAGTCACTGCAGGAATAGGGGAAATGGAAGTGATGAAATTCAATATAGCATTTAGCTGAATCATCATCTGAGGTTAAGCCCAGTGAACAATTAGCAGTATCGGGAG chr4 + 94230402 44854252 44854251 44854661 44854252 44854251 44854661 410 CACCACATACAAAA----AATGTGA-TCAGACGAGAGGTCAGGTTGATTTTGTGAGGTTGAGCTGAGGTCAGTGAAAAATTGATAGCAACTTTTTAGATGAAAAAAAAAATCATCAAAGCTAAAGGAAGTTCCTCAAAGTGGGATTTAATAGCAGCTATCATATTGC-CTTGAATGGCTTGACCATTTCTTGTGCAGCTGTTTTATTTTAAAAGATTTC-ACCCACATTCCACATGTATCGGCCTATACGTTGACCTAAGTACACACATCCAAGTACTTTGGTCACTCGTGATAACTATAAACCCTTCAGTGAACTACCAAAAAAGTAGTTCAAATGGAAATGGTGAAATTCAATATAGCATTTAACTAAGTCACTGTCTAAGGTTAAACCCAAGGAACAATCAGTAACATGGGAGG ..x:...xx.....----...:...-:..:.xx.:.::.::..:.......:.........x:.:.:.....x:...:.x.....--.......x...x...:...:.............:.x::.:..---..........x:.................:.....-.::..--.x........:....x::..........::......:.x:..:.-.::.x::......x:::.:x.x...x:..:x......:...:...:..:.....:xxx:x..:.....xx..x...::.......:....x..:::..::x.::.:...xxx........:..:.....................:..:.:...:::...:.......:....:x.......:..:.::..x..::. 14M4D7M1D59M2I42M3I35M1D5M2I44M1D197M 289/403 71.7% 410/94230402 0.0% 14/403 3.5% 128693546 61521009 +3182 chr4 + 190214555 173562122 173562121 173562180 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATGTGAACCCTGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...x..:x.......x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 97528916 92685639 +3017 chr4 + 190214555 173566876 173566875 173566914 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 148774250 41440305 +3333 chr4 + 190214555 173568755 173568754 173568837 83 CATGGTGGCACATGCCTGTAGTACCAGCTACTTGTGAAGCTGAGGTGGGAGGATCGCTTAAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--......x...........x:.:......x:xx.x.:.x.:...:.:.....:..x.:x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 97535558 92678997 +13532 chr4 + 190214555 173573675 173573674 173574100 426 TTAATTCCTTTAGACTTCCATTTAAAATTTTTACAGGTTTTTAGCTTTCATTTAACAATAATTTGTGATCAAGATTAAATTAGAGTTTATTTTACTTTTAGTGACATTTTCACAACTAGTTTGAACTTAGGTCTCTTGCTGGAGAAATATTTACAAAGAATTAACATCAGATTGCATGGTATAAATGCCATGCCATTCAACTATGTAAATAGCAGCTGAGATGTTTAATTGAAAATAAAACACTGGTAAAATGTAAACA----TCATTTTTGTTCCAGTTGCA--ATGATGTAGGCTTCATGGTACAAATGAAAGCAGTAACTGATGGCAGAAGTTAGAGTTTGTAACAGGGTCCAATAACTCT--CGTGTGTCTGGAAACCCTTTTAGTAACTGCTGTACTCTTGAATGCTGTTCAGTCCACTTCTCAAAACA chr4 + 94230402 44862867 44862866 44863291 44862867 44862866 44863291 425 TTAATACTGTTTGCTTTTCACTTTGCATTTTAACAAGTTTGC-TCTTCACTTTTAGAGTAATTTGTGATCACCAC-AAATGGAAGTTTATTTTA-TTTTAGCATTTCTTTCACAGCTAATTTGAACTTACGTCTGGTTTTAAAGAAATATTTATATAGAAATAATACAAAATTGAATGGTG-AAATGTAGTGCCATTCAGCTATGTAAATAGCAGAAAAGATGTTTAACTCAATATAAATCACTAGTAAAAGCTAAACATTGCTTACTTTTATTCAGATTGCATTGTGCTTGAGCTTTGATTATATAAATGAAC----TAACTGATAGTGGAAGTTATATTTTGAAGTGTGATCACACAACTTTGCTTTACACATAGAAATCTCTTCTGCAAATGCTTGTTTCTCTGGTGCCACGCAGTGTGTCTC-CAAAACA .....x.:x..x.x:..:..:..x:x.....x...:....x:-x...:xx...x.x.:.............xx.:-....x::...........-......::x:x:.......:...:..........x....xx.x:.::...........:.x....x...:.:x.:....x.....:-.....:x:.........:...............xx:..........:.x..x.....x....:......xx......----.:.:....:...x::.....--:..x.xx..x:..x..x:..:.......x----........:.::.......x.x....x.:::x.:..xx.:....:.--:x.::::x.:....:.::..:x.:..x....xxx:...:x::...:::x....x::::..-....... 42M1D32M1D18M1D86M1D77M4I20M2I29M4D46M2I60M1D7M 287/417 68.8% 425/94230402 0.0% 17/417 4.1% 128710808 61503747 +10646 chr4 + 190214555 173576548 173576547 173576854 307 TGTAATTGGTTTCGATACTGTGCTTTTCAAAACTGAAATGTTTGCAATGCTGTTATTAGCTGAGATAC-TGTAGATAGTTTTACATGTTGGGAACAATTAACACGTGTCCTGTGGGTCTGATTATTAGCGTTAAGGAAGTTCTGCTCTGTGTAAACCCCAAAGCAAAGCCTCCAGGAAAGTTAAAGGTCCCTGTTCTACCATTAAAATGGGAAAGTAATGTGCC-----CTTTTT-----TGATTGACTATAAACTTTGACTTGTGGGACTTTGTTCTCCAAGGTGAAAACAAACATGAGT-----ACAAGACAAGTTGTTTT chr4 + 94230402 44865413 44865412 44865728 44865413 44865412 44865728 316 TACAAATTATTTCAA-ATCATGCATTTAAAAAC---AGTGTCTGGAGTGATGTTATTAACTTGGGTAAATGCAGACAATTCTGCATGTCAAAGACAATTAACACATATCCTGTGGTCTTGATTACCAGGTTCAAGGAAATTCTGCCCAGAAGAAATTCT-TGGTAAAGCCTCATGGAAAGTTAAAGGCCCCTGCCCTAAAATTAAAAGGGGAAGGTAATGGACCCCCCACTTTTTTTTAGTGATTGACTATAAACCTTTGCTCAAGGGAC--TGTTCTAAGAGGAGAAGGTTAAAGCAAGTCAATAATAAAAAGAGGTGGTTT .::..x.x:....:.-.:::...x...x.....---.:...:..x.:..x........:..x:.:..x-..:...:.:..:.:.....:::::...........:.:........x::......::..xx.:......:......:.x.x:x...::.:-x:.:........xx.............:.....::...xx.......x.....:......x:..-----......-----...............:..x:..::x.....--......xx:...x...:::x..x:::...-----.:..:.x:..x..x... 15M1D17M3D32M1I90M1D64M5I6M5I30M2D29M5I17M 212/300 70.7% 316/94230402 0.0% 23/300 7.7% 128711135 61503420 +19548 chr4 + 190214555 173579837 173579836 173580289 453 TTTAAGATTATGTTGCCTC-GTCTTTTAATTGTTGGTCAACATTTCAAATAGAATGCAATATATTTTGTGCCCGATGACAAGCAAACTACATGTTTCTTATAGGA-TGGATGGTTACTTGTCTTTGTAAAACCAAATATCATTCTCTGAAAAG-CAGGTCAGGTAATGCTAGCCTTAGTTAATAGCTGGGGGTACCTTGAGTACCTCTCAAATCAATAATGACAGAGGTAGCCTGATAGCAATTTATGAACCACAGTCCTCTTGGGAAACATATTTCAAACCATAACTTCATCTAAACTGTTTATCGGCTAAGCTTGCTCAAATGTATGAAGTGTCAAAAAGTTTCTTTGACATTAGGCTTGTTATTGTCCTTTGATTTATGCACTTAAGCAAAATGCAGTAAATAAAAAGATTG----GTGGTTTAGTATTTTAAGGAAATGATTAGAAACATTTGCCA chr4 + 94230402 44869386 44869385 44869840 44869386 44869385 44869840 455 TTAAAGGCTGATTTTCTTCAGTATTTTTATTAAGTGTCATGCTTTCAAATAGAAGGCAACATGCTACACATGTGATGACAACCAAACAATGCATTTTTCACAGAAATAGATGGTTGGTAGTCTCCATGTGTCTAAATATCAGTCAGAGAAGAGGCAGGTTAAATAACAGTTGTGCTGGT-AACCACTATGGGTGTCTTGTGCATATCTCGAATCAACAATGACAGAGGCAGTATAAAAACAATTTATGAACCACAGTCCTCTTGGGAACTACTTTTCAAGTCATAATTTCATCTAAACTCTTTATCGGCTGCTTTTATTT-AATGTATGAAGTGTCAAAAATTTTCTCTGACATTAGGCTTGTTATTGTCTTTTGATTTATGTATTAAAGCAAAGCATAGTAACTACAAAGATTGCTTAGTGGTTTTCTGTTT---GAAAAATATTGGAAACATTTGCTA ..x...::.:xx..x.:..-..x....x...:xxx....xxx............x....:..::.x:::::x:........x.....x.::::...:.:.:..:.-.:.......:x.x....:::.:x:x.:........x..xxx...:..-.....:.::...::x.x.:x:.:..-..:x:..:x....::....x.:.:x....:......:...........:..:x.:.x.:.............................x:.:x......::.....:............x..........:xx:..::.:-....................x.....:......................:...........:.:.x.......::::.....x..x........----.......xx.:...---.:...xx...:...........:. 19M1I85M1I47M1I25M1D140M1D94M4I14M3D24M 327/448 73.0% 455/94230402 0.0% 12/448 2.7% 128710451 61504104 +26429 chr4 + 190214555 173601457 173601456 173601940 484 TAATTGGTAATTTTCCAAGATAGTCTAAAGGGGGTAAGTTATATTTATGTGATCTAAATCCATTGGTTAAATGCAGAGGGATTAACATCTGTTAAAAGAGTTGTGCTTGGCATGCAGGTGTTTCAATATTTGCATTTAGTATGTGTTTCAGAAACAGCCTCTGAGAAAAACATTTATATAACAATCTGGT-GTTTTATTGTCTAAATCTGTCGGGACAGTCATTTTGTTACTCAGACTTTGTGACCCTCTTGCAAGCCGTAAACTATTTAACGAAGTGAGTATATTGAGAAAGATGACAGACTTCCAAACTTTGGGGAAAGAGTATTATATGAGAAGAATCAGCTTTTCCTCCTGAGACTGTGCCTAATATGTGAACAGCAAAAAC----AATTACACTGGTGATTTCAGGAAGTCCAATAAATTCCATAGCACAGTCTCACTTTTGAAAT-------ATTACATCACTCAGCAAAA-GCTTATGTTCGTATATTAA chr4 + 94230402 44877482 44877481 44877977 44877482 44877481 44877977 496 TGATTGGTAATTTTCCAGGGAGACCTGAGGGGGGCAAGTTGCACTTATGTGATCTAAATCCACTGGTTGCATTCAGGGGGATTAACATCTGTTAAAAGTATTATGTTTATCATGCAGGTGTTCCAATATTTGTATTTATTACGTGTTGCAGCAACAGTCTCTGAGAAAA-CATTCATATAACAATCTGGTTGTTTTATTGTCTGAATCTGTCAGGACAGTCATTTTGTTACTCCAACATTGTGATGCCCTTGCAAGCTGTAAACTGTTTAATGAAGTGAGCATATGGAGAAAGATGACAGACTTTCAAACTTTTGGAAGACAGTTTTACATCAGAGACGTTAGTTTTTGCACATGGGACTGTTCCTAATACATGTATGGCAAAAATGTTGAATTAGATAGAACATTTCCAGAATTCCGTTGAATTCCCCTGTGCAGGTCTATATTTGACATTGCTTTCATTTTGTCAATAAACAAAACACTTAGGTTCCAATATTAA .:...............:.:x:::..:.:.....:.....::.:..................:.....:x..x...:.....................x:..:..:..:x............:.........:.....x..:.....x...x.....:...........-....:...............-............:........:....................x:..x......:x.:.........:.......:.....:........:....x..................:........x..:.:.x...x...:..x...::x:.:..:....x.x.x..:......x.......::..x.::.......:----.....x.:x.:xx.....x:...x...:x.:......x:x.::...x:::.:x.....x..-------...x::...x.x.:.....-:....x....xx....... 169M1D20M1I195M4I61M7I19M1I19M 379/483 78.5% 496/94230402 0.0% 14/483 2.9% 128723975 61490580 +3088 chr4 + 190214555 173624065 173624064 173624146 82 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 116252037 73962518 +4473 chr4 + 190214555 173642987 173642986 173643134 148 TTGATCTTATAATAGAAATAATGAC-TTCAACCAGG---TTTTCTGAGAAAATTAATGACTGCCTAAGGTTAATGGTCT-------------------TCAA--TCTCCCAGTCAGCCA-TTAATCCCCAGGAAATGCCCTGGGCCTTGATCATTATTGTGTAAAT--AATACAAA chr4 + 94230402 31889230 31889229 31889403 31889230 31889229 31889403 174 TTCATTTTCTAGGAGTAATAAAGACCTTGGGGCAGGGCATTTCCTTTGGA--TTAATGACCGGCTGGGGTTAATGGCCAGGAGCTGTTCTTTGGGCCATCAACTTCTCTCAGGCGGTCAATTAATCCCCAGGAAATGCTCTGTGCCTCAATCATTATTGCTTAATTTCAGTGCAAA ..x..:..x..:x..x.....x...-..x::x....---...:..xx.:.--........:.x..::.........:.x-------------------....--....:...x.:.:..-..................:...x....::..........:x...x.--.:.:.... 25M1I10M3I11M2D27M19I4M2I15M1I46M2I8M 112/146 76.7% 174/94230402 0.0% 30/146 20.5% 141753757 48460798 +5382 chr4 + 190214555 173642987 173642986 173643127 141 TTGATCTTATAATAGAAATAATGACTTCA--ACCAGGTTTTCTGAGAAAATTAATGACTGCCTAAGGTTAATGGTCTTCAA-TCTCCCAGTCAGCCATTAATCCCCAGGAAATGCCCTGGGCCTTGATCATTATTGTGTAAATA chr4 + 94230402 85109565 85109564 85109708 85109565 85109564 85109708 144 TTCAGCATATAACAGCAATAGGGACCTCACTGCAGGGCACTTCCTGAAGATTAATGGCAGGCAGGGGTTAATGGCCTGAGGCTCACCCAGTCAGTCGTTAATCCCCAGGAAATGTTCTGTGCCTCAATCCTTAATGCTTAAGTA ..x.x.x.....:..x....:x...:...--:.x:..:x:.::xx...:.......:.x.x.x::.........:..xx::-..x.........:.:.................::...x....::...x...x..:x...:.. 29M2I50M1I62M 98/141 69.5% 144/94230402 0.0% 3/141 2.1% 88533422 NA +3041 chr4 + 190214555 173645404 173645403 173645467 64 TGCTGTTGGATTCTGTTTCCTACTCTTTGGTTTATGATTTTATTTATTAAAATTTTATTTATTT chr4 + 94230402 72110569 72110568 72110632 72110569 72110568 72110632 64 TACAGATGCATTTTCTTTCCTATTTTTCAGTTTTTCATCTCATTTATTAAGATGTCATTTGTTT .:.x.x..x...:.x.......:.:..::....x.x..:.:.........:..x.:....:... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 101534835 88679720 +3267 chr4 + 190214555 173649321 173649320 173649404 84 AACAGAGTGAGACTCCATTTAAAAAAAATACACACACACACACACACACACACACACACACACACACACACACACATATGTATA chr4 + 94230402 24017419 24017418 24017498 24017419 24017418 24017498 80 AATAAAGTGA----TCATTGAAAATAAATAAACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGAATA ..:.:.....----:....x....x.....x...:.:..............x.x:......x:.x.x:x::...:x....x... 10M4D70M 58/80 72.5% 80/94230402 0.0% 4/80 5.0% 149631902 40582653 +3549 chr4 + 190214555 173650173 173650172 173650226 54 TGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAAGCGCTTGAATCCAGGAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.:...........:.........x.xx.x.....:......:....:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 97616962 92597593 +66264 chr4 + 190214555 173651261 173651260 173652767 1507 TCTTAGAAATTTGA-AGTGTGTGATTACTGTAGCTGTATATAATTGACATACACATTATA-GATGCC-GAATTCAGATGCATGTATTGGATTATAGTAGATAATTTCTCCCCTAGTGGCA---TGTTTCTGTTAAATCTTTAGGGGTCTATTGGCTGCTATATATAAAGTGTCTGAGGAGCACTAGGTGAATTTTTTT--ATGTAAAGATATACAAAATTGTAGCCACTTGTTTTTGTGTGATAGA----GACAGAAACTGATATAAATGTGGTTGTCCTTGT--GGCATTTTAAACAAGCAAAAAGTTA-AACTGTCTATAAAGAAACTGCATTTTATACGTTTTATTATTAAATCCACCACTGCTTTGCTGACTAATAAAATGGAAAATGTGTGCTTTTATGGGTTTATAAAAA-GGTAAGCTATAGTTTCATGAAAAATATCTTGCACGGATTGAATACAGGTGGCTACTTGTTTAGACTTTGAAGATGTAAACGCTTAGTATGGATGTCTGAAAAAGGTAATCTGGCACAATAAAAAAAATCTTCCGTTCTTTGCTCATCAATCCTTTGGGTATTCCATGTCAAATAAATGCTACAACAATTTATAGTAAAAGTACACAGTGGAAGTGCCAACGTTAACACTCCTTAGGACTGGATACCTGCCAGGGTTTTCACACCAATATTTAATGTGAACTAAAATGTCTTTTTCATTGGAAGTGTGAGAGG-AGCTTGCTTTCCTATATTTGGCAACGTGCTTATGTGAAGTATAAAGTCAAATGCCCGTGATGTTCTCTTTATTTCAACCATGATAAATTGTGTTCATTTGTTTAAGTGCATGTGGCAGCTTTAGTGTTCAAACTATAAATTTTGGTTAACTTCTATTGACATGCTGTATTAAACTTAAGAAAAACAAATTACACTTCACCCGTTTTAATTGACTAAATGTGTCAAAAACACAGTAAGTATAACATGAAAGGTCAGAGCCTTCATCTACACTGTAATGGGTGTCATGGCAGGGATCCAGCTTTTCTTGTACATTTCATTTTTCATGAAGTTTTAGGACAAGGCATACGTTTAACATTCACTTCCACTTCTCATTTGGACTTCAAAGTTTATCACAGGCTGTGTTACTACCAAGAACACTTTTCTCTTGTGCTATTTAAAGTTCCCTTCCAAC--------TGACGTGCATGCCCAGA-GAATACTGATGTTCTCCTGTAAACA-AGGCCTCGGGAATGGATTTTGGCATTCTGAGGAATGAAATGCTGATTTATA-AGCACGCCCATAGATCACTGTAGCACTCCTTGGAAAAGACCTGGTTTACATATCT---AGTCCCCCCTTCCATGACTGAACCAGCAACCACGTGGCTAGGAGTTGGATTAAACTTGGCACACTGGATTCCTTTGGGATCTGATTAAAGT-TACCAGTTTTAATTCTTGAGCTCTGTGTCCAATGGTTTATATAAATCTTTATGACTTCAGTAA---TTTATCAGCTTGACACCTGATGATTAATATG----ATTAATTAAG chr4 + 94230402 44883743 44883742 44885248 44883743 44883742 44885248 1506 TTTCCGAAATTTTACAGTGCTTCATTACTGCAGATAAATGTAGTTATAGTTCACATAATACGAAACCAGAATTCTTGTGCAGGTACTTAATTGAGGCGGATAAATTTTTACGAAGCAGTACTTTGTTCCTCCTAAATCTTTAGTAGTCCATGGGTAATAATATAAGTAGT-----AGTAGTGTTAGGTAAACTTTTTTTAATGGAAAGA-----AAAAATACTGCAGTTTGTTTTGAGTTTTCAGTCTCTGACAATGAATGAAATGAAGGAGGCTCGTATTCCCAGGAATTATAAAGGGTTAAAAAAACATAGATCTCCATAAAGAAACAACATTT-GTGAGTTTTATGGTTAAATCAGCCATTGCTTTGCTGACCAATAAAATGGAAAATGTGTGCTTTTATAGGTTTATAAAAAAGGCAAGCTCTAGTTGCATGAAAAATAACTTTCACCGATTGAGTACAGGTGGCGACTTGTTTAAACTCTGAAGATGTAAAGGCTTAGTATGTATGACTGAAAAAGGGAACATGGCACAATAAAAAG--TCTTCCTTTCTTTACTCATCAATCCTTTGGGTATTCCATGTCAAATAAATGTTACAACAATTTACAGTAAAAGTATACAGTGGAAGTGCCAACGTTAACACTTCTTAGGATTGGACAGGGTCCAAATTTTTCACACCAATATTTAACGTGAAGTAAAATGTCTTTTCCATTGGAAGTGTCAGCTGTAACATGCTTTCCTATATTTGGCAACATGCTCATGTGAAGTATAAAGTCAAATGCACATGATGTTCTTTTTATTTCAACCATGATAAATTGTGTTCATTTGTTTAAGTGCAAGTGGCAGTTTTAGTGTTCCTACTATAAATTTTGGTTAGCTTCTATTGACATGCTGTATTAAACTTAAGAAAAACAAATTACACTTCACCCATTTTAATTGACTAAATGTGTCAAAAACACAATAAGTATAACACGAAGGGTCAGAGTCTCAGACTTCACCATAATGGGTGTCATGGCAAGGATCCAGCTTT--TTGTACATTTCATTTTTCATAAAGTTTTAGTATGAGGCATACATTTAACATTCACTTCCACTTCAGATTTGTACCTAAAAAAATCTCATCTCTTCTGTTCC---------CATTGCACTCTAATTTTGTTAAAAGTTCCCCCCTCCCTTCTTTTTTTAGGTGATAGTACTGATGAATATTGATGATCCGCTGTAAACATAAGATTTCAAAATTGACTTTGGTATTTGTAGGAATGAATTTGTGATTTATGCAGTACA--AGGAGATTTCTGTCAAAACCCATGCCTGAGACTGTGGTTAGGAATCCCTGAGACCACTTCT------CTAAACAGGCGAT--TGTGGTTGAGTGCCAGATAAAACTTGGCATTCTTCATTCCCAGGGGATTTGGATGGAGTCTGTCACTTTCAATGCAAACATTTCATGCTAAATAACTGATGTCTATTTTTGT--CTTTTGGAAATCTTTACCTGTTT----TCTGAAAGTTAACAAGTGAAAATAATTGAG .:.:x.......x.-....:x.x.......:..x.:x..:..:..:xx:.x.....x...-..x:..-......xx:....x...:.x:...:x:.::.....x..:.:x.xx..::.:.---....:..x:...........x:...:..x..:x::x.....x:x...-----..x..:::.....:..:......--...x.....-----....x.::x..x::.......x:xx.xx:..x----....:x:.x...x..:..x.x..:.xx:x..x:--..x...x....x::x:.....:x:.-.:x.x..:..........x:.....-:.:x.......x:.......x:...:............:...........................:............-..:.....x.....x...........x...x...x......:..........x.........:...:............x..........x...x..........x..:x..............:--......x......:.....................................:............:..........:..........................:.......:....:.xxxx...::x...................:.....x.............:............x..xx.-.:.x.....................:....:.......................x.:.........:...........................................x.......:..........xx.................:....................................................:..............................:...........:...:........:..:x:x..x...::.................:............--....................:.........x.::........:.....................xx.....x..:.x...:xx.x...:xxx:.x....x.---------..:.x:x....x:.x:.:..x.........::.:xx.--------.x.x...xxx.:x.x..-.....:.....x..:x.........-.:.x:.:x::...x..:.....:...:xx.........x.xx........:-..:..:--x:x....:x....x:x.x:..x..xxx:....:xx.x...x:x...:---..x..x.:::.------..:...x:..:.:--:....:.::.x.:::...x..........:x..xx.....:xx.....:..:x.::...-.::..x...:...x.xx:x::.:::..::x...:::.x..:.xx..:...:.--...:x.x..---....:.x.:..----:....x::....:.x.----.x.....:.. 14M1I45M1I6M1I52M3I47M5D23M2I9M5D32M4I33M2I25M1I25M1D79M1I125M2D185M1I302M2D101M9D37M8I17M1I25M1I51M1I6M2D47M3I11M6D13M2D59M1I52M2D9M3I11M4D16M4I10M 1123/1467 76.6% 1506/94230402 0.0% 79/1467 5.4% 128767518 61447037 +20411 chr4 + 190214555 173670213 173670212 173670802 590 AAAATCGAGAAAGAAAGTTCTAAAAAAGAGCTTCC------GCCCAGGGATCAAGTGCTTCCATTGGTCAGTTAGTCTTAACCT-TTCTGATAATTATATTACGTGCAACAACAAAGACACAAAAGGGGATAAATGTCTTAAGAGTTATATTGATAAACTATGTGTGGTGCCCAAAAATGGCATGGAATATCTTGTTTAAGCTGTAAAAATATATTAGCATGTCATGTTATCTTCATAAATTCTTCTCACACATAGGGTGGGTGGAGTTC--CCAAATCCCAAGACACATTACCAATTCGGCTGGTCACGGCAATTCATCAATTTTTTTGTCACATATTCGCAGACTCACAGTTGGGACTGAGGTATTATGATTCTGGAGGGTTTGATAATAGGTGAATTATTAGCTGTTGGGGACAGATTTGTTTCTGAGCCTTTCTGTGGCAGTCTCTTATATAGGAAGGTAATCATTCTCATGGAATTTGCTTCCT--CAGACTTAAAGAGATTTCGAATATAACTTGTAA-----TGTTTTTCCCAGTA----AAATTTCATTAGTGGTTAATTATGACTGGTAGAGCTTTCCGGAAGTTCACCAAGAGTGTTGAG chr4 + 94230402 44891072 44891071 44891664 44891072 44891071 44891664 593 AAAATCAGAAAAGAAG-----CAAGAGGAGTTTCTTTTCTTGTTCATGAGTT------TTCTATTTAGCAACTTGCCTTTACCTGCTTTGACAATAATACTATGTACAAGCACAGGGA----AAAAAGGGGAAAGGTCTTGGAAGTTATATTGATGAACTATGTGTGGATCCCACAGCTGGCATAAAATATCTTGTTTGGGCTGTAAAAATATATTAGTATGTCATGTTATCTTCATAAATTCTTCCAACACATAAGGTGGGTAGTGTCCCTCTGAATCCCAGGACTCATTACCATTTCTGCTTGTTCTTCCCATCCATCAGCTGCTCTGTCATGCA-GAGCAGGCACGCGGCTGAGGCCGCAGCATTACGGTTCTGGAGGGGTAGATACTGAGTGAGTTATTAGCTGTGGCAGATAGCCCTGTTCCTGAACACTCCTGAGAAGGTTCTTCGCTTAGGAAAGCAACAATTATGATGGCATTTTCAACCTGGGGGATGCCAGAAGGCTCTGAATGCAGCCTGTGCGTCTTTGTTTTTCCCTTTGCTACAACTCTGATTAGACATTAATCACCATTTCCAGGGCTTTCT-AAAGTTCACTGAAGAAGCTCAG ......:::......:-----x..:.:...:...:------.::..x.::.:------...:...x:x..::.x.:...x....-:.:...:...x...:..:..:...xx...::..----...::..:x...x.....:::............:............xx....x.:x......::............::..................:...........................:x.......:.......:.x..:.--.::.......:...x........x...x...x..:x:xx.x..:.....::.x:.:.....:::.-xx....:.x.:.:.:..:.:.:.x:.:....:.:..........x.x....x.::....:...........x.x:..:..x::....:....:.x:.:...x.:x:..:::.:::x......:.:..:x...x.x....x....x.xx...--x:..:x:x.::..::.::....::.:.:...:x-----..........xx.:----..x.:.x.....xx:.....:.:x.:.xx:..:......:-:........::.:::x.:.x.. 16M5D14M6I11M6D26M1I33M4D148M2I65M1D151M2I33M5I14M4I40M1D22M 392/573 68.4% 593/94230402 0.0% 37/573 6.5% 128779141 61435414 +3000 chr4 + 190214555 173675285 173675284 173675353 69 GAAACCAATTCCTTTTTTTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCTTTTCTTTTCTT chr4 + 94230402 7218309 7218308 7218377 7218309 7218308 7218377 69 GAAATGGGCTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT ....:x:::.::........::..:x.:.:....::...:..::..:.......:..x..:::..:.:. 69M 43/69 62.3% 69/94230402 0.0% 0/69 0.0% 166456976 23757579 +3525 chr4 + 190214555 173675302 173675301 173675374 73 TTTTCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTCCCTCCTTTTCTTTTCTTTTCCTTTTTTTCTTTCTTTTC chr4 + 94230402 53757784 53757783 53757858 53757784 53757783 53757858 75 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTC ..:......x..:..:::x...:::x--...::..:...:..:::..:...:.................:..... 26M2I47M 52/73 71.2% 75/94230402 0.0% 2/73 2.7% 119917518 70297037 +3058 chr4 + 190214555 173675324 173675323 173675373 50 TCCTTCCTTCCTCCCTCCTTTTCTTTTCTTTTCCTTTTTTTCTTTCTTTT chr4 + 94230402 59557958 59557957 59558007 59557958 59557957 59558007 50 TCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGTT ..x..:.:...:.:.:.:....:...........x..........:.x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 114117366 76097189 +26560 chr4 + 190214555 173695930 173695929 173696726 797 TTTTTTATTCTGCATTCTTCCCGGGAGAAATGTCTTCC--CATCTAGAAGAATCAGCAGTCTTTTACTATCCAGACCTATTAAA-TTGAACGATTGATTGTAACAAAGCCTACGCTGTTATA---TTCAAGCAGTTGTTACATATCTCATATGCCAAAATTGTTAAAAATAACAAAGGCCTATTATCTCGAATGTGGGAAACCAAATCATTTTTTTAAAGGCGTGATTAATTGTGTGAGTTTGAACCCCTTAAGTAGGTGTGGTAAGCTGTATTCCGTGGGAA------------CTTGCTCAGTATGTGTGCAACTATGTAAACAAAAAGTTAAAATGCAGCTAACACTTTCCCTGGCATTTATTAGCATAGCAAAGAAAGCAGAAACCAACCAATTTTTACATAAAAAGACAGTAGAAAGCTGTGTCTGCCTGCATT---ACTGTTCAATCTGTGGGTGCCAACTATACTCATAGAAACAATTTTTATTTATAGG----------------------CCTATCACCAAAATGTGTTCTTCATTAATTCATATTTTTCTCAGCCTCACATTACTTCTTGAACCCATCCAGGTG-GTTTTTAAATGAT----AAGGGTAATTTAAAACTGAGCAA-ATTCATGTGTACCCCATTTTCCGTGTTTAAGAATAATTGAACGGAAACATCTTTACCATTCATTCAATATTTTGTTAATTTGTTTACCTTTAGTGAACCTGAGGAATACCACAAATGTGAGCATGGCTGGATCTTTTGAATTAAAATCCACACTG-GGAAAGAAATAGACCTTGAA--------CATCTTGCCAAA---GGTATTTAGA-AATCTATTTCTCA chr4 + 94230402 44902340 44902339 44903164 44902340 44902339 44903164 825 TTTCCTATTCT---CTTTTCATTGGACAATTATCTTCCACCATCTTAGATAATCAACAGCCTGTTGCAGCCCAGACATATTAAAACTCAGCAAGTTATTGTAGCCAATACTATGTGATTATAGTATTTTAGCAGCTAGTGCATTTCTTTTGTGCATGAGCTCTTAAATATAACAAAGGCCTATTGTGTTCAACGTGGGAAAGCAAATCATTTTT---AAAATGTGATTAATTGTGTAAGTATGGACCTTTTAAGTACATGTGGTAAGCCCTATGCTATGGGAATGACACTTACTGCTCTCTCAGCATGAGTCTGATGAAGTAAACAAAAAGTTAAAATACAGCCTATAGCCTCCCTGGCATTCATTAACATAGCATAGAAAGCAGAAACTAGTCACATTTTATATAAAAAGGTTCTAGAAATCTGTGTCTACTTACACTAACATTAGTCAATTGGTGGGTGCCAACTATGCACATAG---CATGTTTTATTTATAGGTCTATATAGTAGTCAAAAACATTCTATCATGGAAATGTGTTATTCATTAATTCATATTTTGCTCAGCCCC-----ACTTCTTGAACCCATCCAGGTGTTTTTTTAAACGATGAAGGAGAGTAATTTAATACCAAAAAGCATTCACATTCACTCTATTTTTTAGTTCCATG--TAACT------AAATATTTCTCCTG----------ATTTTGttta-ttatttatatttaattaG-TTCACATATATTGCAAACTGGAGCTTGTCTGTAATTTTATTACAAAGTTCTACGCAATGGTAAAAAATAAAGGTGAAAAACATAGTCAGCTCACTGAAAGGAGTATTTAAATAAACTTTTTCTCA ...::......---:.:...x:x...x..x.:......--.....x::.x.....:...:..x..:.x::......x.......-:.x.:.:.x.x......:.x..xx...:.:x:.....---..:x.....:.:x.:...x...:x.:...xx:.::.x.....x................:.x.:x..:........x............---..:::..............:...x..:...::.......x:..........:x...x.::......------------..:x.....:...x..x::.:x.x...................:....:x.:.x::...........:....:.......x.............:.::..xx.....:........::xx......x........:.:.:..:.---.:.:x.....:x...............:.x.....---..xx.............----------------------:......:x:.........x..................x.......:.-----......................-x........:...----:..:.........x..::.:x.:-.....::.x:..:.:.....:::xx.::.x.--...:.------...:..:.:.x.::----------........x.-..:....:x....:.x.:-:.x.x:x...:::....:xx....x..x...x.x:...xxx.:x..:x..:..:.x:-..x..:.....:.xx.x:..--------..x..::.::..---:.......:.-..x..x....... 11M3D24M2I44M1I37M3I89M3D66M12I144M3I35M3D17M22I48M5D22M1I13M4I23M1I31M2D5M6D14M10D10M1D18M1D57M1I20M8I12M3I10M1I13M 557/763 73.0% 825/94230402 0.0% 96/763 12.6% 128793590 61420965 +3009 chr4 + 190214555 173712222 173712221 173712269 48 TTTTATACTTTCTAAAATTTTCATAATATTCACATATTGCTTTTATAT chr4 + 94230402 57365067 57365066 57365114 57365067 57365066 57365114 48 TTTTGTATCTTTTAGATTTTTTAGAATATTCACATATTGCTTCCATAT ....:..::..:..:.x....:.x..................::.... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 116347155 73867400 +14931 chr4 + 190214555 173713868 173713867 173714935 1068 CCCAATAGGGTTTCTTAATAATGTTGAGTCTTTCAGGAC--TCACATGAC---------------TATGTGTTGGTTGTTGTCAGAGTGAAATACTTGAATTACCTCTA-TCTAGTCTCTG----TTTACAATCTCCTCTTGAGGTTTCTGTATGCC-AAATTGTACTTAAAAAACATAAATTTCCCTTCAAAGGTAGCTTGGGAGCCTGAAGTGTGGCTAGGGACTCCTAAATGCAAAGGATAATCAAGGTC--------------CTCTCAAATGTAGGTACTGCAATTTGTTTAAAACATAGCACGGTCTAGACTAAAGAATGAGACCTCTACAGATGATTTAACTAAAGGAAAAGGTACAGGCACTGCTGAAAATAAACACTTCTGTAATTAC---CAAAGGCCTTTATTTAGTTAGGACTATCTTGAGGATGTAGCTGAGGGAGCAGTGATTTGCAATGCCACCCCAGACCCCAGAAACAAACAAACAA-ACCAAACCAAATCACAGAGTGACACTTTATTTCTTAATCACATTGGCTAACTGGAA-TTTCTTAAGTGGCTCCAACTTGGAGAAAAGCA---AAATGTGTGAAGTTAGTGAAAGATTACTGCCTTGATTCACCCTTTAAATGCTTGGATTCTAACAATTT-------------CAATTATTTG-TTCATGTTCTCCTTATTT-CCCTAATGTATCATTTACGTCACAAAACTGCCCATTTGGCATTCTTTATCACAAATTATAA----TTTTTCACTAAAGCTTGCAATAAGCCA-AACTGAGTCACGTTCCACATACCTTTTGT-----TTGGCAGAAACCACTCTAGTGCTG----AATGAAGACT---GTTTTGGCCGAT--CCATTGCGCCTTAATTTGTTTGGCCATATGACTGCTTTCTGTCTTCTGCAGAAAAAGGCTCTGTAGCCAGTGGT--TTTTATTTATGTTGCTTC-AAAGCCATG-GCAGCCTTCATTTTACTTGGAAGCTTATTTTATTTTGGCTTTCCCCACC-AGCAGATCATGTCCGATTTTCTGCCTTTATTCTCTTTATTATAACTAT--TTTGGGAAGTATGTATCAGCACACCATG-ATTAAAACACTGCTGTTGATGTTTGGATTAATGCTAAGGCT chr4 + 94230402 44906102 44906101 44907185 44906102 44906101 44907185 1084 CTTAATGGCATTTCCTAGTGATGCTGTATCTTCCATAACACGCACATAACCTGTTAAGTTGCAGGTATTTTTCAAGTCCTTCCACAGTGA--TGTTGAAGACTCTTCCAGTTCAGTTTCTGATTGTTTACAATCTCCTGCTGTGTCTGCAATATGCTTGAATTGTACTTAAAACACATAAATCTGCCTTCAAAGGCAGCTTGGGAGGCAGAAGTGTGGCCAGGGAATTTTAAATGGAAGGGACAAGCAACAGCTACAAAGAACTCAGTTTTTAGTAGTAGGTGTTGCAGTTTGTTCCAATTACAGCAC-----ACACTAGAGTGTGAAATGTTCAT-GCCAGTCTAGTAAAAAGAAAAAGTACACGCAATGCTG-AAATTAACACCTTTGTAATTACAGACAAGCTCCTTTACT--------ACTACCCAGCAAGTACAGCTGAGTTGGC-----TTTG--------------------GATAAATGCAGGCAATAGTTGTGCAATAGGCAATGTGACAT----TTTTTCAATCTGACTAGGTAATGGGAACCTTCTTTGGCAGC-------CGTATAAAATCATTTGCATTTTCAAGCAGAATTCAAGGGTAC--ACTTCATCTATACTTACTTAACTGAAAATCAGACAATTTTTTTTTTTTTTTGCAATTAAATGACTTGCATTCCCCTTCTTTCCCCTTATGAGCTATTAACATCACAAAACTACACATTTGCCATTATTCAACATAATTTATAGCTCCTTCTGCAATCAAGCCAGAAACAGGACATCATAGAGGCA-----AACATGCCTTTCATTTACATTGAGTGAACTGTCTCAAGACATGGTAAAATGAATAGTTGGATATTCCCCAATAATCATAGTCCCTTACTAT------TCACACACATTCTTGGTGACTCATCCAGGAAAATACCATTGAGTGTGTCTTAATTTTATTCATGTTTCCACTATAACCCTGCAGAGACTTCTTAGTGCTTGTAAGATTATTTTA-GTTAGCTTCACTTGCCAAACAGATCTTTCTCCACTTTAT---TATATCATCATTATTATTTCTACTATATAGGAAGTATATTGCCACATATCATATATCAAAACATTACTAATGCCATTAAGA-CAATGCCAAGACT .::...:.x:....:..:.:...:..x:....:..x:..--x.....:..---------------...x.x.:::x.x:.x:..x.....--.::.x:.:x:x.:..:.-.::...:....----.............x:..x.x:.x.x:.....:-:..............x........:.x..........:..........x.x..........:.....x.::......x..:...:..x...x:x.--------------:.:.:.:xx......::....:......:x..x:.:.....-----.x....:..x:...:.:x.::.:-.x:::.:..::x...:.....:.....x...x.....-....x.....:.:.........---...:xx......:.--------....:.:x.x:::.::.......xx:..-----....--------------------..x.x.x:..::...-.x:x:xx...xxx:..:x......:----...:.:....xx.:.:.x...:x....-:.....x:.::..-------:.x.x....x..---:x..x.x::.:xxx.:.xx...:x...--x...x..::.:x...xxxxx:..x::.x..x:.......-------------......xx..-:.::::...:....x...-....x...x:::...x..:..........:.x......x....x..:.x..:..x.....:----..:.x..x.x....:x.x..:.:.x..-x.:x...x..-----x....:.....::.-----...:xx...x:xx...x..xxx..----......x.x.---:.x..xx..:..--:...x.:x.....x.x.------:..:.::xx.x...xx..x..:x.x...:....x:.:x.xx..:xx..xx.--.......:.....x.:x.-.x.:..x..-:x..x....x.xx.:....x...x........-x..:....:x.:::..-.:......x.x::.x.:...x.---.x...:x..x.......xx...:--.x.:........:.xx.x:..:.:...:-..:......:.:..:x..x::..x:..-:.....:...:.. 39M2I9M15I25M2D17M1I11M4I32M1I95M14I41M5D23M1D37M1D22M3I14M8D28M5D4M20D15M1I25M4D27M1I13M7D12M3I27M2D39M13I10M1I18M1I61M4I27M1I10M5D14M5I24M4I10M3I12M2I17M6D51M2I18M1I9M1I32M1D16M1I22M3D23M2I28M1I27M1D13M 652/997 65.4% 1084/94230402 0.0% 158/997 15.8% 128807766 61406789 +6711 chr4 + 190214555 173733911 173733910 173734094 184 TCCTAAAATTATACCATGCCATCACCAAATGTCCAGCACCAGATCCTTATTAGGAGAATAACAGATCCGCTAGAGATTAGAAGGGGTCAGTATGCCCTTTTGGCGTGACTCTCATACACTGTACTCTACTTCGGTAGAAAAACAAAATCATTAAAATAACGTCACACATGAATACTCATTAAAC chr4 + 94230402 44912031 44912030 44912193 44912031 44912030 44912193 163 TTCTATAATTACACTATACAATCATCAACTGTCCAGTAGAAGATCCTTATTAGGTTAATAGCAGA----------ACTTAAAGGGGTCAGGGTGTCCTTTTGGCAAGTTTCACACAAACTG-----TGCTTTTGTGGAAAAAAAAAAT--TTAAAATAGT----TATATGAATGATAATTAAAC .:...x.....:..:..:.x....:...x.......:.xx..............xx....:....----------.:.x:..........x:..:.........:x.x:..x..:.x....-----.:...:x..:......x.....--........::----:.:......:x.x....... 65M10D46M5D22M2D10M4D20M 124/163 76.1% 163/94230402 0.0% 21/163 12.9% 128821880 61392675 +7264 chr4 + 190214555 173736984 173736983 173737138 155 AAGGCTGTGGTGCATGAATCTCTTGACTTTCAAACAGTTTGGTAGGGTATGGCTCTTTCAATGTGTAGAAGTCATGACACAATGCAGGAAGTTTATTGAAACCTTTGTACTGCTATATTTAGCCTGAC---ATCCAGTG--TTCTAGGCTAGTTACAAGA chr4 + 94230402 44915896 44915895 44916055 44915896 44915895 44916055 160 AAAGCAGTGCTCCATGAATCTCTTTGCTTTCAAGCAATTTGGCATAGTGTGACTGTTTCAATATGTAGGAGTCATGACACGAGCCAGGAAGTTTATTAAAACATTCTCAGTGTTTTGTTTTGCCTGGTATAATTCAGGGCATTATAAGCAGGCTAAAAGA ..:..x...x.x............x:.......:..:.....:.x:..:..:..x.......:.....:...........:.xx.............:....x..:x:.x..:.x.:...x.....::---..:...x.--..x..:..x:.:..x.... 128M3I8M2I19M 116/155 74.8% 160/94230402 0.0% 5/155 3.2% 128821088 61393467 +3056 chr4 + 190214555 173741646 173741645 173741733 88 ACAGCATGGTACTGGCAAATAATTTTTTACAGAAGTGGCTTTCTTTTCACTTTGTTTAATAGTTCATCTTTTTGCTTACAGATTTTAG chr4 + 94230402 3589577 3589576 3589664 3589577 3589576 3589664 88 ACCGCACAGCCTCGAGAACCAAAGCCTTACAGAGGTGGGTTTCTTTTTTTTTTGTTTCATAGGCTTGTTTTTTGCATAGAGATTACAG ..x...::.:x::.:x..x:..xx::.......:....x........:x:.......x....x::xx:.......x..x.....x:.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 170152069 20062486 +3035 chr4 + 190214555 173743191 173743190 173743238 48 TATATATGAATATATGTACACACACATAGGTACACACACACACACACA chr4 + 94230402 66743631 66743630 66743678 66743631 66743630 66743678 48 TATAAATAGATACATCTACACCCACTCAGGCACACACACACACACACA ....x..::...:..x.....x...x:...:................. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 106999560 83214995 +3017 chr4 + 190214555 173745075 173745074 173745144 70 TATATATGAACACACACACACACACACACACACACACACACACACAAACTCTGGAGTCTCTATTCCTTCC chr4 + 94230402 89823932 89823931 89824001 89823932 89823931 89824001 70 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGCTTCTACC ........:.:..................x:.:.xx:.:.:.:..:x.:....::x.x.x.::.:..x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 83921143 NA +44089 chr4 + 190214555 173745821 173745820 173746962 1142 CCATTGGGGGAAGATCTTTTTAGAATGTATGTAAGTATATTACAGTTCTGCTATTACTGGGCCATCAGATGCAATTTGGCACAGCATGATGTTTCCACAGTTGCTCCAAGTTAACAGTGATTGTAGAACCCTTAGTGATTGGCTAAGGTTATTTTTAAACCTAATTCTAGATAACTCAGAGAAGTGCTGTTCTATATTCCACATGGTAATCTCAGCAACATTTGGCATCGAGGATTT-----ATTGCATACCATAACTCTGGCTTCACTGTGAATCTCT------TTTACCATCAAAACACTGAAAATAGAACCTCGAAGCAAAGGGACGGCCATGCTATTTTTCATTAGAAAGATCACACCTTATGCATTCA--GGAGTT--CTCTGTTGCATGATATAATTTGTTTGCTTACTTGTTTATTGAGGAAAAC---GTCTTTGCATCCGTGAAGCTTTGATGTAATTGACCACCTCCATCTCAGATGTTAGGTTCTGTCGTTGTTGAAAC-CACCCTATGTGTAAGTTTCTGGGAAATTCTTGGGAGAACTCTGTATTCGTTTAACTTGATGACAAAACAGCAACATGCTAAATAATGTGATTAAAGTTGTTAAAAGCCAAAATAAACACTTATAATTATCTCAAGAAAAACGGTGTCAGGCAAGTGCAGGCTCTATAAAGCGGGACTCCGTGTGCGTC-TTTCAGGTCCTGCTGCACAATAGATCATAGTTAAAGGTCTGTTAACAGACCTCTGACGGCTGAGCTGGGTAGCTTGTGGTTTCCTTCGAAACCTATTGGCATAATGTGAATTTATGTGTGAGGTGCAAATTGGAAGTTACCTTCTACTGGTGCCCTTGGCAGAACAGAAATCATACTGTAGGGCTAGCAGCAGGAAGTACATGGCTTTGAAATTACCCAGCAGGGTTTCTGCTCGCTGCCCTTGTTGCTTCTGAGACAGGGGCCTTATATTGTCTGGTCATGATTAAAATCAAAGTGTAGGCTTCTTTGCTGGGTGCCAGTAAACTTAGGTGAAAAGCAGAAACAATCTGGGATTTTAATTATTTTAAAATGCAATGTGGGCAACAAAAG-----------------------------AAGATGAAAGCATTTTTGACTAATCTATGCCAATTATTCCACATAAACGGATTTGCCAAAAAAGAGGCCCGTA chr4 + 94230402 44916931 44916930 44918038 44916931 44916930 44918038 1108 CCACTAGGGGA-TACCTTTATAGAACTCATTTTAGCATATTATAGTCATGCCATTATAAAACCATCAAATGCAATTTGTCACAGCATGATACTTAAGCAGTGGCCTGAAATTAACAG--ACTGAATTACCCTCTACAGGCAGCTGACGTTATTTATAAATTGGAATTCAGATAACTAAGTGAAGTGCCTTACTGAACTCTGTACTTTTGTATTCCCAATCTCTGTCTTCTCAGCTTTGAAACACTTTCTACACTCATCCTGTATT-----TGAACTTCCAGAATATTTACCA--------CTTAAAATGGGA-------GCAAA-------CCACGCTGT-----ACTAG----------------GCACTCACAGGAGATAGTGCTTTTGCATT-TGTAAATAGTCTTGTAAAAAGTTTAATTAAAAGAACTACATCTTGGCATCTGTGAGG-TCTAGCACAATTAGTCACTTTAAACTCCATTTTCTCTCCCTGCTGCCAATTAAGCACAACTTGTGTGCAA----------AAGTAGTGG-----------------TTGCCGCAGTGACAAAATCAGAACATGCTAAATAATGTGATTAAACTTGTTAAAAGCCAAAATAAACACTTATAATTATCTCAAGAAAACCTGCATAGCACAAGTGAGAGCTCTATAAAGTGAAACTCTGCTTCCATAATTTCAGACTTTCCTACACAATAGATCATAGTTAAAGATCTGTTAACAGACCTCTGACTGCTGAACTGGGCAGCTTGTGGTTTTCTTCTAAACCTATTGGCATAATGTGGATTTATGCAAGAGGTGCAAATTGGAAGTTGTCTGCTATTGGAGCCATTGGCAGAACAGAAATCATACTGTAGGGTTAGCAGCATGAAGTACATTGCTTTGAAATTACACAGCAGGGTCTCTGCTTGTTGCCCCACTTGCCTTTAAGACCAAGGTCTTATACTGTCTGGCCGTGATTAAAATCAAAGTGGAGGCCTCTTTGCTGGGTGCCAGTAAACAAAGGTGAAAAACAGAAACAATCTGGATTCTTAATTATTTTAAAAGTCAACGTAGGCAAaaataaataaataaataaataaaACCTCAACACACAGGATGAAAGCATTTCTTACTAATCTATCCTAATTATTTCACATAAAATGATTTCCT---AAAGAGGCCTATA ...:.:.....-x.:....x.....:x:..x.x..:......:...:x...:....:x:::......:..........x...........::..xx:....x..::x..:.......--.:..x.xx.....:x::::x::...:.x.......x....::x:.x.::........x..x.......:x.x..:x.:..:::.:xx.x:.x.:xx...:x.:..x.x..xx:.x...-----.:.x:x...xx.x.::...xx..-----....::..:------.......--------..x.....:.:.-------.....-------...:...:.-----.:...----------------...:...--....x.--:x..x......x-.:...x.x..:.xx.x.xxx.....x.x.::.:...---:....x.....:....:.-.:.:::::....:::...:.:x.x...x:x.x.:xxx::...::.:::x.x..:.-..x.:.:....:..----------..x.xx...-----------------..:x.x:::........:x:x........................x...........................................x.x.::.x:x:......x::...........:.::....:.:x.x.:.x-......::::.x..:.....................:....................x.....:.....:............:....x....................:.......::x...................::..x...:...x...x............................:........x.........x.............x.........:......:.:.....:xx....:.:.:....x::..:......:.......:.:.................x....:......................xx.........:..............:x.:...............xx...:..:.....x..x.:-----------------------------.:.............:.x..........x.:.......:........xx.....x.:---.........::.. 11M1D105M2D118M5I23M5D9M6I7M8D12M7D5M7D9M5D5M16D7M2I6M2I12M1D36M3I18M1D55M1I14M10D9M17D138M1I390M29I57M3D13M 792/1059 74.8% 1108/94230402 0.0% 132/1059 12.5% 128828890 61385665 +49200 chr4 + 190214555 173764884 173764883 173766835 1952 AATGTGAAATG-TAGAGTATTTCAATTAAGATTCAAGTTGACTTTTTAAAGTGTTGTTCAAGTCAAATGCTACCCTGTGTCAATTGCTTCCAGCTGCTGA---ATGAGTTTGTAAAGTTATAGGGCATTATAACAACAT----TGACTGCAACACTTCTT-AATT---------------------------TCACTTTTAGAACATAGGAGATAAATCACATTGTGTG-TAAAAGTGTAT-------CAAAATAATAAGC---------------AATAAATAAAGAA---------------------------------------TAACAACGATAAAT--------AATAAGTAATCCCCTCTCTGGTCTTGGAGAAATATGTGTGAAACAAAGGCTGAAACATGTATGTAA-AGTTTTAAAGGTGAATCACCAATTGCTTTCAGTGTTAGTTTATCTTACATCTTTCCATTCTTCAGTAGAAAATTTTGCATTTATTTAA---GTAAGTGTTTTTGCTTTTTTTCTTAATTTTACTATAGGTCATTTTCTTGGGAAAATAACGGTGACATTGTTGCATATGAA---AACCAAGAAACATTGTGAAAGATT---TAATTCATGCTATGGCCATTTCAGCAGAATCTCACTGAATTTTATGTATATGAAATGATT------TTTAAAAAATAGTAGA---ACCTTTCCATGGC--------------CAAGCACTACCTACATTGC---CCCACTCTGTA-AACTCTTTATGTCAAAATGAAA--ACTAAATGATATTTTGAAA--CAAGTGTGCACATATAAAAATTTCTTCTAGAATCCAGTGGT-CTCAGAATGGATTGA-----AGAGAAAAAGGTTCACTGCT-GACCAGGGGCTTATTTCCCATTTTTCATTTCTGTTTGTAATTCCTGTCATCTTTGTTTCTTGTGCTTTTGCTAAAAAGGGCGACTC--ATATTTATTGGACCTGGGTTTCAATAAACAGTATGCATTATGGTGAACCAAAGAGTGATTTATTGATAATTTGTCACTTATATTTATGAAATTGTAGACCCCAGAGCTCCAGAGCAGGTAAATCATATTCCACAGCCTCAA-TGTGTTGGTCCCCGTCCGCCCGCACCCCCACTCCACTCCATAAGCCAACCGCTGGCTCCATTTACTGCCAAAAGCTCACATCATGTAAGCTGACAGCCCCAT--ACTTCTCAGGTCCTGGTCATCATGCACTTACAAATACAAGAAAAATAGA------------ACAACTGTTGGAGACTTACTTGTTTTTTCAATGTGTTTTCAATTTATTTCTCAAGTCCAGAAATAATAAATTAATAAAACATAATTAGATGTAAAATTACAAGTTAATGAGGCTAGAGAAGGAGCAAGAATGTAAAAGGAACAGTAGATTGTGAGATTTTTTTTTTAGTTTGTTTATTATGATACAGCTGTATAGAACTTTCACACAGTTTCCAGATGCAGACAGCTGTTAGTCCGTTGCTATTAAGGAAACAAAGGTTCAGAGTTCATTTTGATCCACTTGTTCTAGACTAGTGGTGTTTAACATGGCACTTCACTCAGTCA-----------TATAC-AAGACTGTCAAGATGGGCATCATGTCTTCACTTGCC-TTTTGCTGCTCACTTATCTCTTCTGGCAACCTCTCCAACAGCAAGCTGCCCCACTCTTCCTAACATGTTTATCTCCCATGGTGATGTCAGCAGAACTCAGCAAATCTAATATTCATGCTCAAACAGATTTGTTGGTGCTCTTTGTTTATAAGAATCAGCCCTGTATCACTCTTGCAGCTGCTTCCTCTAGATAATGCATACAGGGCTTTGTGTTTTGCATT---CTCTTTAGACAGGACTTGGGCGACGAACAAAGCACCTACCTATATCTGACTACAACCTATTTTTTTTTTTTTTTTTTTTTTTACAAAAATCTAATTCCGATTTTTTTTTCCACGGATGTGACTATAA----CCTTGTCTTTTTCC--GCTTGGCCACTTCTTTTGGACATAAAATATTTACAGCAATGAAACAATGCATATGTTTTCTTTTCTGGAGGAATAATCA-----AGAGAAATAAG--------ATTTTAAAAATATAATTTAG chr4 + 94230402 44926624 44926623 44928638 44926624 44926623 44928638 2015 AATACAAAAGGATAGGGAACTTCAGTTATGATGTAAGTTGATTTTTTCAAGTGTTACAGAAGTCTAGTGAT-TTCTGTGTAAATTACTTCCAAATGCTGACCTACAAG-----AAAATAGTGGGATAGTATAATCCCATGTTTTAATT--AGCACCTCTTTAATTAGCACCCCACCTTTGATTAGCATCAATTCACCTTTCTAACAGGTGAAACACATCCAATTTTTTGCTAGAAATGCATATGCATCTGAAAAAATAATCTTTGATGGTGGTGGGAAAATGTAGGGAAGTCTAAACTTTTTTTGACTCATTTTCTTGAAGTAATATTTAGTAAGGGTGAATGCCATAGCAATACTTGGTCCGATTTTTGTGGTTACAAAATGGAGTGGGAAAAAAAAGTCTAACTGCA-ATGTAACAGTTTTAGAGTTGTA---------GTTTTCAGT-----------------------ACACAGAGGTGAAAAATGTAAACATTAAATAACATGCAAGTGTTCTGGTTTTCCCTTT-----------------GTTTCCTTTTTCAAATAAT-------TTCTTGCA-ATGAACAAAACCAACACAGTTTCAGTGTGCTTGGCTGATCTACGATTGGACAAGTTTGGAAGAATTTTACCAGTTCTAATGTAGTT---CTGATTGGTGTGCTGAAAAAGTACTGGGCTGATTTCTTCAGAGAGCAGGAATCAGATATAGGAACTACACAAATAACAAACAAAATCAGAAGAACAATATCTATCATAATCAAAGAACAGAATCACAGTTGGAAGGTCATATCTGT---TTTCAAGGCAGATTTTAGAGACCAACAATGCTGAGGCTGTAACGATGCTAGGGAAAAAGGGTTTGTTGCTTGTGAAGGGGCTTATTTCTCATTTTTCATTTCTGTTTGTAATCACTGTCATCTTTGTTTCTTATGCTTTGGATAAAAAAGGTGACTTTTATATTTATTAGAACTGGGTTTCAATAAACATTATGCAATATGGTAGACCAGAGAATGATTTATTGATAATTTGTCACATATATTTATGGAAGTGTAGACCCTGGAGCCCTAGAGCTGGTAAATCATATTATGCAGCTACAAATGTTTTTTT----------------------TTTATTC----------------------TTTGCTGCCAAAAGTGCAC--CATGTAAACTGATTGCCTCACCAAACCCCTGGGGCCTGATAATGATGCACTTGCTAATACACAGGGAGGAGGGGTGAGGAGAAGACAACTAATTATAAGTTTATTTTTGTTTCAATATGTTTGCCATTTGATCTAGAGTTCCATAAACAATAGATTGATGAAATATAATTAGGAGGAAGATTACAGTTTAATGAGGCAAAAGATTGGGAAAGAATGTAAATGGAGCAGTAGGCTCTGCGGAGTTTTT----AGCTGTTTATTATTGTACAGCTGTAAGGCACTTTCACACAGTTCCCAGATGGAAGCAGCTGTTAGCTCTTCGTTACTAGGAAAAAAGAGCTTCATAGTTCATTTTTATCCACTTGTTCCAGAGCAGTTACGTTCACTACAACACTTCACCGAGTTGCAGCTCTCAGCTATGCTGAGCCAGTCAGGATGGGCACCCTGTCTTCATTTGCCACTTCGCCATTCGCTTATCTCATCTGGCAACCTCTCAAGCAACAAGCTGTTCCACTCCTTGTAATATGTTTATCTCCCCCAGTGATGTCAGCAAAAGTCAGCAAATCTAATATTCATGCTCCAACAGATTTGTTGGTGCTCTTTGTTTATAAGAAAGGGCTCTATATCACTCCTGCAGCTGCTTCCTCT---------TCACCAAGCTTTGT-TTTTATATGGTACTCTTCAGATAGGCCTTGGGAGCTACACAAAGCATGTGCC--CATCTGACT-TAAC--AGTGTTTTTGTTGCTTTTTTTAATAGAAAAAACAACTCGCGTCTCTTTTTTTTCCACACCATACTATGAGATCCTAAGTTTTCTTCCCAGCTTGTCAAGATCTCAT--ACATGAGACA-GTACA-CAAAAGGCCAATGAGAGTGGTTTCTCTTT--AAGAAGCAATCACTGGGAAAGAAAAAAGTAGGCAGAATTTCAAGAATGAAGACTAG ...:::...x.-...:.x.:....:...x...x:.......:.....x.......::xx.....x.:..x.-::......x....:......:x......---.::..-----...:.x:.:..::.x.....:xx...----.:.:.--.:...:....-....---------------------------....:...xx....x:x..:.:.x...xx...x.x..-..:..:..:..-------::...x.....x.---------------..x.x:..::...---------------------------------------..::..x.:.:...--------....xx.::...xx.:.:..xxx..:x.:..xx:x...x....x...:.::x..x::::-......-.......:..x..x.---------.:.......-----------------------.:x.xxx:..::.....x.x:xxx...xx...---.:.......:.x.:...:::.:.-----------------:...:...xxxx......:-------..x.....-.....---......x.x.xx..xx.x:x.x..---.:..::.:.x.xx.:.x.x..::.x.....:.:..:::x.:.x.....xx.---x.....------:.x.....:..x.:.:---.::.:.:..x:.x--------------:.:.x.....x:.x..x:.---.xx.x..x.x.-...xx.x.x.:...x...x...--..x:...x.:.x..x...:--..x:.x..:---.x.x..:::xxx..:....:x...::::.-..x..:x..x.x:..-----:.::....:....:::....-.xxx.............:.......................:x..................:......x.x......:..:....:--.........:..x.................x......x......::....:...:......................x..........:..x.........::....:.:.....x.............x::....:x...-...x..xx.----------------------.::.:..----------------------...:..........:x...--.......:....:x...:..:--.x::.:::..x....:.x..x........:.x......x::::.:x..:------------......:x.x:x:.x..xx..x..x.......:.....x.x....:x.::xx.:x....x...:....:...:..:...:........:x.x..:......:x..........x.:...xx.:.x...........x...:......::.x..x.:xx.....----:x:..........x:..........x:.x..............:.......x.::..........::.x.:.:..:..:.:...x.:..x....x..........x............:...x:...x::...:.x:.:::........:x...::-----------...:.-:..x.x....:........:.x........:.....-:..:..:::..:........x..............x.:..:.......::......:.:x...:.............x::............:..x........................x.................................xx:..:..:........:................---------x:..x::.......-....::..x---.....:...:...x......x.x::x........:x.:..--:........-:...--.x.x.....x..x:.......xx..x.....x.x.x.:x..x:.:......::x.:x.:xxx.....:.----.:xx..:..:....--.....x.x.xx...:x.--....:.:.:.-x....-...x:::x.....x:x:..x.....:..:--:..:.::.....-----.:.....x...--------....:..:...:x.:x:... 11M1I59M1D28M3I5M5D26M4I5M2D10M1I4M27I37M1I11M7I13M15I13M39I14M8I59M1D6M1I15M9D9M23D32M3I23M17D19M7D8M1D5M3I24M3I51M3D6M6I16M3I13M14I19M3I11M1I22M2I19M2I9M3D29M1I15M5I20M1I86M2I141M1I9M22D7M22D19M2D21M2I49M12I163M4D156M11I5M1I36M1I188M9D14M1D9M3I40M2D9M1D4M2D69M4I14M2I17M2D10M1D5M1D29M2D12M5I11M8I20M 1286/1809 71.1% 2015/94230402 0.0% 349/1809 19.3% 128838260 61376295 +3270 chr4 + 190214555 173770620 173770619 173770672 53 TTTTTTTTTCTTTTCTCTCTCTCTCTCCCT---CCCTCCTTTCCTCCCTCCTTCTT chr4 + 94230402 14674445 14674444 14674500 14674445 14674444 14674500 56 TTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCCCCCCATTCCCTCAATTTTTCTT .....................:........---...:.x..:....xx.::..... 30M3I23M 45/53 84.9% 56/94230402 0.0% 3/53 5.7% 159096175 31118380 +4065 chr4 + 190214555 173770690 173770689 173770835 146 TTTCTTTCTC-TTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTCTT---TCTTTCTTTCTTTTCTTTCTTTCTCTCTCTCTCTTCCTTTCTTTCTT-----------TTCTCTCTTTCTT-TCTCTCTTCTTTCTTTCTTCTTCTTTCTCCCC---TCCCTCCCAC chr4 + 94230402 50176267 50176266 50176430 50176267 50176266 50176430 164 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTC-TTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTTACAC .....x....-:.x..:..::.::...:..:x.:.x.:.x..:..---.:x........x......x.x.::x.:.:.x.....-..........-----------.:.:.x:......-....::.::.........:..:.x....:.x.---.....:x... 10M1I34M3I36M1D10M11I13M1I32M3I10M 103/145 71.0% 164/94230402 0.0% 20/145 13.8% 123594423 66620132 +4498 chr4 + 190214555 173770704 173770703 173770963 260 TTTCTCTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCTCTCTCTTCCTTTCTTTCTTTTCTCTCTTTCTTTCT-------CTCTTCTTTCTTTCTTC--------------TTCTTTCTCC--CCTCCCTCCCACCC-------TCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC-------TTCCTTCCTTCCTTCCTTCCTTCCTTGTCTTTCTTTG--TTGTGAAAGAT----CAGGGAAGGGAGATATCAGTGCAGGCTGGGTGCT chr4 + 94230402 67728277 67728276 67728574 67728277 67728276 67728574 298 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTT--TTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCTGGAGCTTCACCCATGAAAGTTGGATTGCAA---AGGCTGGGTGCT .....x:..x....:....xx..:::.:x.......x.x...x.x::.....:.:.::.:..x:x..:....:x:x......:..x:.:x...-------...:.x:.x.....::.--------------.......::.--....:.:x:.....-------...xx....:....xx:.....--..::...x.:.x:::.:...-------......xx:...:.x::xx.........x::...x..--.:x..:.:xx.----..x.:...xx:...xx..:---............ 93M7I17M14I10M2I14M7I22M2D20M7I37M2I11M4I19M3D12M 166/255 65.1% 298/94230402 0.0% 48/255 18.8% 106042427 84172128 +84761 chr4 + 190214555 173781994 173781993 173784038 2045 AATACCATTTAGATCCTTGAAGTAAGCTGATATTT-TCACCTCATAAAAGTACTTCTGCATGTTCACCTGAGAAGAAGAAAAA-AGTGACATTTTCTAGTGGCTTTCATGAAGTATCCCAGTAC---TCTCAAAAGGAAGAAACAGAAAACTCTTCATTGCCAGATGCTTGGAGATGGGAGGGAGGTAGTACATCAGT----------ATCTGTAATTCTTATAGCAGTATTGTTTCAAAACATGCTATGTACATACTTACATACCTATGAACAGACATGTCAACATTCTTTAGCAATCAATCTAAAGTCTTTTCCTCCTAGACTCCTGTTCTCTCTGCAGTATATTAGAATGCA-AAGATTTCAGCAGGAGTT---GGATTCA-------TTCTTGGATACCACTTAA--CTATTCTGAATTTCCTGTATGTCAGCTTTCTCTGAGTT-TTTAATCCTAT-------GAGAGA-TGCCAGCTTTTAGGAACATGGATAGG---ACATCCCCATTTTGTCACTGCTGGGGCACAAAAT---------CCCTGCCATGTAATTTAATGGTCT-CTTTCCTCTATTGAAATTAATAT---TTGAAAATTGAAAGCCCAACATTAGCACCAAATATTTTAAACATTTTATAGCCCTTCAGCTGTTCTGTAGTGCCAGTTTGCTTTCCATTCCCCT--TGACATCTCACAATGCTAAGTACCCAGGGACAGCCTGTAGAGGTTTCCCCATAATCCACCTTTATCCATTAACAGACACTCAATCACTAAAGTGCTTACTAGACTAAACATATTTATCCAACCAAATCACACTTTACAATGCAAATCTGCCAATCAGACCTTGGATATTAACGAGGAACTGCTTTAAGGGGATTTTGGTGTTTGTGCTGTGAAGAGCCTGCTTACCTCCAACGAACCACTAAACCAAATTAACATAGCTGTATCCTCATAAAAGAAACCAGATATCCTGTTGTGAAAATAGAGAGCTTGGTGGGACAGGCCTCCTTTGATGGCTAACAGTGTGGCAGAC-AAGGGTTCAGACTTCAAATCTGGCTACCACAAAGTCATTATGAACCTCCAGCATCAGGCTTTTGATAACTTTAAAAGCAAAATAAAAATGTAGCATTGGGGTAACTCAGTAAGTTGTCAACTTACCCAGTTACTATTATAATTGCAATAAGTGCTGTAATTGTTGGATAAGGCTCCTTAATTCTAATTGCTCCTTCAACCAAGATCATGTTGTAAAAGTGCTTGCATTAGCCAAAAATAAAATCCAAGAGACACAAATGTGGTAGTAATAATAATTCTTTTTATTGGCCTGAAAGAGAGGAAGAGAACAAAGCTTTAAAA--ACTTCAAAGTTCTGACCAG--AAAAAAAAAATCAGAATTGGAGAAACTCATACACTCTTTGCCCCTTTATTAGACCAATGCTCACTAAGTGCCATCACCATGAGTTGAGGGGTTGACAGCACTTTTTTTTCAGGTCTGCGAGTAAGTTACACCATCTATGTTGCCGTCTTAATTTAAGATTTCTGTCACAAACTACATAACACAGCCCTGTATGTCCTCACTCAGACCTCTTAATCACTTCAGACTTATTGGTATTATACCTCCTTTAAATACCAATATTTTAAGGCCG-CTTTGACACTTGGTAGGGTTTGAGGTAATTTTTTTCTCCCCACTTAGCTAGCAAGAGAAGAAAGGCAGAATTT---ACTCAGAGTTAAAGTACAGACACAGTGTAAATAGTAATTCGTAAAATAATA---GGCAATTATGCTGCACAGAAAAAGAACGCTACTGTATCTCAACTCT---ACA-CTTCGGGTCCTAAAATGAAATATGAATTTCCAGT-CTTTACTGTTTATCAAAAATAATGAGCACTTTCTTATTTTGGTAGACTTTATAGGCACTTCTGGGGAAAATATTATGTGTGGCTAGAACAAGCTTCA--TTTTGGAGGCCACTTTTCACTCTGGAATAATTTCCAAAGTGAATAAACCACAACATGTGCAT-TTTTCCAAAGATCAGCCGAGTAG------------AAACTTCAAGCC----AAAGTAGAAATTAAATTGTCATGCAGCAAAATGT----CAGTAGTTTGCTAGA chr4 + 94230402 44932762 44932761 44934829 44932762 44932761 44934829 2068 AAGGCCATTCCAAGTCCCATAGTAAGCTGATATTTACCACCTCATAAAAAAGAT-----GTGTACACCTAAGTAGGGGAAAAAGAGTGACGTTCGTTGGCGGTTTATATAGAGGATCACATTACCTTTCTTAAAAGTAAGAGA-AGAAAGATCTTCATCTCTG--TGTTTGGAG-TGAGAAGGTGGAGAAACGATGGCTCTGAAGAAAATCTTTGCTTTGAAGAAGACCTTAATACCAAAA---GTAGAAAGTAGGCTTGCACAGCAAGAAGTAAGCATCCTGA-----TTTA----------TAAAACCCTTTC----TGGG----GGTGTTGGGGGAAACACAAAAAATTACATCAGATTTCATTCTGAATTAAAGGATTTACAGTAGATTCTTA-AGAAAAGTTAGTGCTACTCTGCATTTACCCT---CCAGGTACCTGGAGGCTATTTGGCTCTATCTGCCGAGAAAGACTGCTAAGTTTTCTGAATATTCCCAGATGCATGTAACAATTATGCC--TGTTTGAAGGCCAAATGAGAAGGCTACAAGCTGCATAGTCT---GCTCTGCTTTGTTCTTCTCAAATGAATATGATTTTAAACCTAAATACTGAAA--TAACACTGAATATTTAAAGTATATT-TAG----TGAGTTTTTCCACAGCGCCTGTTTGTTTTCCATTCCCCCCATGACATCTCACAACTCTAAGTGCTCAATGACAGCCTGTAGAGGTTTCGCCATAATCCACCTTTATCCATTAACAGACACTCAATCACTAAAGTGCTTACTAGACTAAACATATTTATCCAACCAAATCACACTTTACAATGCAAAACTGCCAATCAGACCCCAGCTATTAACAAGGAACTGCTTTAAGGGGATTTTGGTGTTTGTGCTGTGAAGAGCATGCTTACCTCCAACAAACCACTAAACCAAATTAACATAGCTGTATCCTCATAAAAGAAACCAGATATCCTGTTGTGAAAATAGAAAGCTTGGTAGGACAGGGCTCCTTTGATGCCTAACAGTGTGGCAGACGGAGGCTTCAGACTACAAATCTGCTTACCACAGGCTCATTACAAAACCCAAGCATTAAGCTTTTGCTAACTTTAAAAGCAAAATAAAAATGTATCATTTGGGTAACTCAGTAAGTCATCAACTTACTAAGTTACTGTTATAATTGCAATAAGTGCTGTAATTGTTGGATAAGGCTCCTTAATTCTAATTGCTCCTTTGTCCAAGATCATGTTGTAAAAATGCTTGCATTAGCC-AAAATAAAATCCAAGAGACACAAATGTGGTAGTAATAATAATTCTTTTTATTAGCCTGGCAAAGAGGAAGAGAACAAAGCTTTAAAAAGACTTCAAAGTTCTGACCAAGTGAAAAAAAATCTAAAATCGGAGAAACATGCATACACTCTGCCCTTTTATTAGACTCATACAAACTAAGTGCCATCACCACAACTT-AGAGCTTGACAGCACTTCTTTCCCAGACAGCAGGAAAAGTTACACCATCGATGTTGCAGGGCTAATTTAAGTTCTCTGTCAAAAACTACATAAACCAGTCCTGTATATTCTCACTAGGAGGCCCTAATAGTTTTAGACTTATTGGTATTATACCTCCTTTAAATCCCAATATTTTAAAACTGATTTTGACATTTGCTGAGACTTGGTGTAA----TTTCCCTCCATTTAGCCACAGCAAAAAGAAAGTTGAAGTTTTGAATTCTGAAGCAACTTGTTCACAA-----AAATTTACCTTTTTAAAGAAACGCCTGTCAATTTT---------AAAATGCATACACATACTTCTTTACTTTTAGATATCTTTAGCTCTGTGGTTAAAATATATATTTCCAGTCCTTCACTGCTTATCAAAAATAATGAGCACTTTCTT-TTTTACTAGCTTTTATAAACACTTCTGGGGAAAATTTTATGGGCAGCTAGAACAAGTTTTACTTCTTGGAGAGAAGGCTTCATGCTGGAATCATACTCAAAATGAGTAAACCACAACATGAACAGATTTTCCAAAAATTGCTAGAGCAGGCTTTGTAAGTTGGACTTGGAGACATATAAAGTACAAATTAAGTTGTCATGTAACAGAATAGTATACATTTGTATGCTAGA ..x:.....:x:.x:.:::x...............-:............:x:x.-----:...x.....:..x..::......-......:..:x:.:.:..:..x:..::..x...x..x...---...:.....x....:.-.....:x.......:x.::--..:......-..:..:..x..x::x..:x::.:----------....x.:x..:xx.x.:x.x:x.x:.x:.....---.:x:x:x::.x:...:..:.x.x.x:.::.::...x:::.-----....----------....::.:....----.:.:----x..x:.xxxx.x.::.:.xx.:.x.:..-x........x:xx..:..---.....:.-------.....:-.x.xx.x...:--...:....x....x.:x.---:...x.x:..xx::.:.-...::::....-------..:...-...:.:x....xx...:..xxx:..:---.::.xx.x...x..:.--..:.x.::x:.x....---------x.xx..::::..:.:.---.x...-....x:...x:.x....x.....---..x...x:.:..x:.:x..x--..:...::.......x..::..x..-...----.x..:.x...:::..:...x.....:............:--.............:x......:.:..:x...................x.................................................................................................x..............:::.x.......:............................................x..............:.....................................................................:........:.......x...........x.................-:...x........x........x:.......::x......::..x.:.x.....:.:.......x...........................x....x................::.........:x.......:............................................................::x...................:..............-....................................................:.....:x.:.........................--..................:--:........x::.:...:........x:::.:..x..:.....:..........:x..:.xx.................::.x..-..:.x............:...::...::xxxx.::x.............x.......x.xx:.........x.:.......x...........xx...:.......:.:......x:..xx:.:....x::..:..............................x............::.:.-:.......:...x.::.::...:x....----....:.:...:.....:.xx:x:.:.......x:::.:...---.:..x..:x:..xx.::xx...x-----....xxxxx..:x....:x..::---.x.....x.---------....x.x.::.xxx.::x...:x...:.---.:.-...::.x..:xx::x.:......:x.........-...:....:..........................-....:x...x:......::................x.....x.::...........:..:.--.:......:xx.xx:....:x.......x..x::....:...:..............x:..x-.........:..::x:x...:..------------::....x:..x.----......x.......:........:.:..:...:x----..x.x..x....... 35M1I18M5D24M1I40M3I16M1D19M2D9M1D23M10I33M3D40M5D4M10D12M4D4M4D28M1I18M3I7M7I6M1D11M2I18M3D17M1I11M7I6M1I26M3I16M2D16M9I16M3D5M1I23M3I20M2D25M1D3M4D39M2I349M1I232M1D87M2I19M2I85M1D182M1I28M4D41M3I23M5D23M3I9M9D28M3I3M1I34M1I35M1D61M2I62M1I23M12I12M4I34M4I15M 1512/1973 76.6% 2068/94230402 0.0% 167/1973 8.5% 128849232 61365323 +3873 chr4 + 190214555 173820652 173820651 173820713 62 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATCGCTTGAACCTGGAGGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ......x....:.:...........::..........xx.x...x.:........::..:.. 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 97787448 92427107 +18547 chr4 + 190214555 173821924 173821923 173822454 531 AGTTTGACTTAGCAACTTGTACTCGATCCTTTA-TAACAAAACCTCTCTGCTAATGTGAAGCAGCTGTGGCAATTTCACAAAATGGCCTAAACTGTTGAAAAGCCATTAAGGGTCTGATGTATGTAGAATAAAAAGGTTCATTCAGCTTTTTAAAAGGTTTCCCAATATGGAGTGTTATTTTATTTTATAACCAAGTCTTAGTCATATTAAGTTTAAATGCCACAGAAAATT-TTAATGACCATGTGGCTGGCTTTTTCGGTGAAATAGCAGGAATTCTTCAACATACCTAAAATTCTTTTAGAAAAAAATTGGTACAAATCTATAAG-ACACACCAT------GCA-AGTTCCCACTATTAAATGCAGAATTAGAAAATTTAGCAACACATACAGGGTGACTTACCATTTATGCTTGTCGGGGCACCTAACTGAATTGGAATCAATTTCTTTAATCCTAAAGCACATAGAGTCTGCTGGAAATAATGAAAGCCACTTGCTTTCC-CAGCTTTTTCATAGATCTGAGCCTCAATTATTAACT chr4 + 94230402 44951480 44951479 44951991 44951480 44951479 44951991 512 AGTAAGACTTAGAAAGCTGAA---GGTCTCTTAGCAACAAAACCCTGTAACTAATGTGAAGCAGCTGTGGCAATTTTAGAAAATGGCTCAAACTGTTGAAAAGCCATTAGGAAGCTGATATATAGAGAATAAAAGGAACCACTCAGC-TTTAAAAAGATTTCCCAATATGGAGTGTTATGTTATTTTATAACTAAATCTTAGTCATCCAAAGTTTACATGCCACAAAACGCTACTTACGACCATGTAGCT---------------------GGAATTTCATCACATACCTGAAATTCTCCCAGTAAAAAGAAATTGCCGATGGCTAAGCACATATTCTTTTGTGGTATAGGTGCGATTGCTATATT-----TCAGTGAGGCTGATGCCACTTATGGTTTGATTTATTATATGTACTTGGAATGGGATCCTAAATAATTGGAATCAATTTCTTTAATCCTGTAACTCTCAGCCTCTATTGGAAATAATGAAAGCCACTTGCTTTTTGTAAACTTTGCATATGGCTGATTGTCAGACATTAGCT ...xx.......x..x:..x.---.:..::...-:.........::x:x:..........................:.x........::....................:.::x.....:...:x.........:.:x:..:.....-...x.....:.....................x............:..:..........x:x.......x........:..x::.-:.x.:........:...---------------------......::x:x........:.......:::..x.....:xx:x.:.x:..xxx....-...:.::x.------.:.-..x.x.x.:.::..x..x-----.:..x:.:x:.::::x...x..::.xx...:...::..x.:.:....xx:x..x.:.:x.xxx.........................:x.:.x.x:..xx...::..........................::-:.:x:...x....x:x....x:x...:x:....:.. 21M3D9M1I113M1D84M1I17M21D57M1I9M6I3M1I18M5D134M1I36M 358/501 71.5% 512/94230402 0.0% 41/501 8.2% 128870444 61344111 +7031 chr4 + 190214555 173828037 173828036 173828274 238 TTTAATTGATTTAACCACTTGACTTTAAGCTGCAGTTCAATGTTCAACTGATATGATGGCACCATTCATA-AGGGAAGAACGTATGAGACACATAAGTCAAATGGGAGATAGGATAAGTGCTCCTATCTGACATCTTGATTAATATGAATTATGTCAAGCTTATTTAGTAGTTCATAAGTTCACATCAGCAATGATAACAGTAGCCATTAGTGATGACCCTGAAAACGTTGAGCCTTTA chr4 + 94230402 44955170 44955169 44955396 44955170 44955169 44955396 227 TTTAATAAATGTATCCAGTTGACTTTCAGCTCTGTTTTAATACT--------GTGAGGTCTTATTTTGTAGACAGATAAAATTATGAGACCTATAATTCAAGTA--AGATAGGATAAGCACTCCAGACTGACAATTTGATTAATATAAATAAGGATGAGAA-GTTTAGTGCTTCATTTGTTCATGTCAGCAATGATAAAAACCAACATTTATGATGATACTG-AAATGCTGAACTTCTA ......x:..x..x...x........x....x::x..:...::.--------:...x.x.x:xx..::..-.x:..x:..xx........x:....x....:.:--............::....x:x......x:...........:...x.x.x::..xx-:......:x.....xx.....::.............x.::x:x....x:......:x...-...:.:...:.:.:.. 44M8D18M1I33M2D55M1D60M1D16M 156/226 69.0% 227/94230402 0.0% 13/226 5.8% 128872867 61341688 +3086 chr4 + 190214555 173834835 173834834 173834903 69 CAATTATTTCT---GGAAATATAAGTGTGTGTGCATGTGTATATGTGTGTGTGCATATGTGTGTGTGTGTAC chr4 + 94230402 12120990 12120989 12121061 12120990 12120989 12121061 72 CAAATATTTCTTCAGGGAACATGGACTTATACAAAGGTGTATGTGTGTGTGTGGATATGTATGTGCCTGTAC ...x.......---..:..:..::::x.:.:::x.x......:..........x......:....:x..... 11M3I58M 50/69 72.5% 72/94230402 0.0% 3/69 4.3% 161713845 28500710 +34639 chr4 + 190214555 173835693 173835692 173836331 639 TAAAGGGGACTTTTGTGGGGAAAAAATCACACACTTCCTTGTGTTACACAGCAAGCATCCTGTGTGTTATTTAGAGATCCTTTATCATGGAGGGTGGTCCAGTGGTAATTTACCAGGGAAAAAAAGGA--GTGTACAAAAATTTAATTATTATTTGACCTCAAATAATTATATGCCACTAAACTAATTAAAGAGCAAATTAACAATGTGCCACTGATGGGCAGTCTGCTGTTTGCATGACTCACTCATCTTTTGCAAAGAATAAGTGATTTGTATTAGAAATGAGTTGTTAAGGATGTTTTGGGGGATAACTATCGCTGTCATTTCTATGTTAAATCACAGGCCCAACCTCTGGATAAAAAGAGACAGGCTTATCATGAGCCAGGGAAACGGCAGCCCTAGCCTGATAGCTCTGACTCGAGGCCTTGTTT-AAAAGCTATGACTCAGTGCAGGGCAGCCAGGGAGCTCTGGTCCT-CTCAATTCCTTCCAAACCAGCCATTCAGCCTCTAATGTTCAGGTTGCGTGCCTCATGCTGATTATTTCTGTGAAGTCCATCAGAGTCAGCCTTATTCTCCC----AAGCATTCATCTTCATTTCCAAGTGAATGAAGGGGGATTTCAGTGGTACTACTGTTCACAGAGCAG chr4 + 94230402 44957391 44957390 44958025 44957391 44957390 44958025 635 TAAAGAG--CTATTGTGAAAAAAGAATAATGAATTTCCTAATGCTCTCCAGTAAGTATCCTGTATATTATTGGAAGATCCTTCATCACAGAGGGTGGTCCGCTGGTAGTGTAC------AAAAAAGGATAGTGTACAAAAATTAAATTATTATTTGACCCTGCATCATTATCTGCCACATAACTACTTAAAGCACACTTCAACAATGTACTCTTAATGTGCCGTCTGTTACTTGCATGACTCATTCATCTTTCACAAAGAATAAGTGATTTGTATTAGATGAGAGTTGCTAAGGATGTTTTTGGGGCTAGCAATTGCTGTCATTGCTATGTTAAATCACAGGCCCAAGCCTGGGACAGAAAGAGACAGGCTTATCATGAGCCAGGAAAACAGCACCACAGGACTGATAGCTCTGACTTAGGGCCTTGTTTAAAAAGTTATGACTCAGTGCA-AGCAGCCAAGGATCCTTAGCCTTCCTCAGTTCGCTCCAAAGCAGCCATTAAGAGCCTAATGTTCAGGTTGCGTGCCTCATTCTGATTATTTTTGGGAAGTTGATCACAGCAAGCCCTTTTTTTCCTAATAAGCATTCATCTTCATTTAC---TGAATGAAGGGCGCTCTCAGTGAAAGCTCTATACATGGGACAG .....:.--..x.....:::...:...x.::x.:.....x:..:.x:x...:...:.......:.:.....x::........:....::...........:x.....:.x...------.........--.............x...............:::x..x.....x......xx.....x......x:..xx.:........:.:x:.:...x..x.....:.::............:........::.........................x:x......:............x....x..:.x..:.........x......................x.::x...:.:...........................:....:...x.x.x:.x...............:::..........-.....:..............-:.......:...x.::.:.:.:.-....:...x:......x........x..xx:.........................x..........:..x.....:x....x..:x....:.x..:.:..----..................x.---...........x.x.:......:x.x:x..:.x..::.::... 7M2D104M6D9M2I300M1I20M1D23M1I101M4I20M3D43M 498/627 79.4% 635/94230402 0.0% 20/627 3.2% 128878302 61336253 +11168 chr4 + 190214555 173838832 173838831 173839269 438 TATAACAGATGTTTAAAATGCACCTTGGGATACATTCATTACGGACATACACAATTAATCCTTCAGAACCTGCTGCTCACATCATGCTTTCCTTACCTGTTCAATGGTTTACACCTGCACATTAGGAGTGCACCTGGTTGAAATGTGAGCGACTCCCAACACCAGCTTGTTAAATCTTTTCCTATAAATTCTCCTCTTTAAAATGTAGCAAAATAAATTCAGAAACAAAGAAACGCACCTACATAAACAAGTAGATCCCTGAAAAGCATAAGCA--GCCACTGAACTCAACCAAAAAGCACAGGTGGAAG-GAGAGTTTAAAGGACCTTAGAGCACTGTGAATGTTTTTCACAGCGTCACAATTACAGAAACACCTGGTTC---TGCAAACGGGCTGATCCACTGGGAAAATTTTCCAGTGTTCAAT-GGGCCTCAGAGTGGCTT chr4 + 94230402 44962090 44962089 44962482 44962090 44962089 44962482 393 TATAGCAGAAGCTTAAT-TGCATCTGTGGAAACATTCATTACAAGTA-------------------------CCATTCACACCACACTTTATCTAT---TCCTCTGCTGTACACCTG-----------TGCATGTAGTGGTAATGTGAGAAACTCTCACTACCAGCCTTTTAAAT--TTTACTATG--CCCTCTTTTAAAAAATGTGCTAAATTAGATACAGAAACAAAGAAACACACCTAAATAAACAA--AGGAACATAAGGAACATGAGCAATGCCAC---ACT--GCCAGAAGGAGCAGGTGGAAATGTAAGTTTAAGGAACCGTTAAGCACTGTGAAC-TGTTTCAGTGTGTCACAATTACTAGAACACCTGGGTCAAATAAATTAGGATTAATCCATTGGGGGTGTTCTTTACAGTCTACTCTGGCCCCAGAATGGTCT ....:....x.:....x-....:..xx...x...........::::.-------------------------.:::.....:..::....x::..:---.:.xx..x.x........-----------....:x.:..x.x........x:....:..x:......:.x......--...x....:--::...:.:.xx.......:x:...x..:..x...............:......x........--..:xx.x.:.::.:...:....--.....---...--:...:..:.x:.........:-.x:.......:.:...x.x:...........:-.x.....xx.:...........x::.........x..---.:x.xxx..::.:.....:....::x:..:.::.xx..::.x.-x....:....:...::. 17M1D29M25D24M3D18M11D47M2D9M2D62M2D22M2I5M3D3M2D21M1I32M1D37M3I43M1I17M 274/386 71.0% 393/94230402 0.0% 59/386 15.3% 128876742 61337813 +3014 chr4 + 190214555 173847058 173847057 173847113 56 CTTTCTTTCTTTCTCGTTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGTGA chr4 + 94230402 70062266 70062265 70062321 70062266 70062265 70062321 56 CTTCCCTGCTTCCTGCTTCTCTCACTTTTTTTTTTTTTTTTCCTTATTTCTTGTAA ...:.:.x...:..xx.......x....:...:........::..x...:....:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 103784792 86429763 +3305 chr4 + 190214555 173851931 173851930 173851980 50 AAAAAAAAAAAAAAAAAAAAAAGAAGAGAGAGAGAGAGAAAAGAAAGTCT chr4 + 94230402 7875202 7875201 7875251 7875202 7875201 7875251 50 AGAAAATACTTAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAGAAGGTCT .:....x.xxx...........:.................:....:.... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 165976729 24237826 +15143 chr4 + 190214555 173859136 173859135 173859811 676 ATAATGTTTAGTCAGAGTAGTTGGGAGGCAATAAAGCCCCCACGATTAATGTTCCCATAGG----AAGTAGCCACAGTGACCTCCTCCAGCACTCATGCTAATAAGGCTTCCTGTGTCCTTGT----CTGTGTGGAACAAATGCCTCTTCATCAACCAAGCACCACCAAGGCTGAAATTAGGAAATAGAGCCCTAGGAATAACAGACTTCTATAAGGAGGTGAGACTCTCTGACCAGCAGCCTCAACAGAGTAATCTTGTTTCTAAACATAGAAGCAATTTTAGGGCCTCTTTCAGGGCAGGGAGACAATTATTGCCAAAACAAATAAGGCAGTGTCTCTCTACCTCCGGCACTGAGTGAATTCCGTCTGAGTAAGGGCTGTAGCCGGAACAGCAGCACATCAGTTTGGCTGGACCGTCCTAGGCTAAGGACTTCTCTGGATTGTCTTTGAACAGTTTAAGTGTGTCCTCTTAATTGATGGATGAGCT-AACTAAAGCAGAATGGGAGACACAGGAGGAGTGCCGTGAGCTTCACACCCATTTGCCTAACAACAAAAATGTACT--GTATTCACTAGAGATGGAAGACTTTCGTCAA-----GAATGTTAAT-------AACATTTGAAACTTCAGGATATAATTTCTAAGATGTCTAAAAATTCTGA--TTATGCC-----CTGAAATGATCACTTCAA-ATGTAT chr4 + 94230402 44966367 44966366 44967031 44966367 44966366 44967031 665 ATAATGTTTGTTCAGAAA----GGCAGGCGGTAAACCTTTAACAAACAATATCACTGTAATCCTTAAATAGTAATTGT-ACTGCCTAGGGCA----TGTGATAAAGGATTCTAGTGTTCTTTCAATATTGTGTCAGGCAGATGC------ATCAATCAAACTCCATAATGGACTAAATTGGGAAATAGGGTACTGGGAATAA-ACAGTTCTAAAAAGAGGTGAGGCTCTGTGACATGCAGCCTTAACAGACCAATCTTGATTCTAAACATAGAAGCAATTTTAGGGCTTCTCTGAAGGCAAAG-GACAATTATTGCCTAAACAAATAAACTAGTGTCTCTGTACCTCAGGCATTCACTAAAGTTAGTCTGAAACAGTTTTCAGATCTGACTAGCAGAGTTTCAGGGACACTGTA---TCCTGACCCATTAACTT----------TCATTGAACTGTATATGAATATCCCCTTAGATAATCCATAAACTAAACTGGAATAGAATGAGAAA-ACTGGAAT-TTGTTATGATTTTAGCACTAATTCTGCTGCCAACAAAAATA-ACTAGGTCTTAACTA-AGATTGAATGCAT--GTCAGCCTTTGAATTTGAATCCTCACGAACATTGCACACTTAAAG------TTCTTAAGTTCAATGAAAGACCTGAACTTCAGCCTCTATTTGGAATGTTTATTTAAATATGTAT .........:x.....:x----..x....::....x.:::x..:.x:...:.:x.::..:x----..:...:x.:x..-..:x...xx:...----..:x.xx....x...:x....:...x:----:.....x:::..:....------.....:...:.x...:x.x..x:x.....:........:.:x..:.......-.x.x.....x..:........:....x....xx.......:......x:.......x...........................:...:.x.:....::.-.............x..........:x:.........x......x....:.x.x.:..x.:x......:xx..xx:.xx:::.x..x:.....x::x....xxxx:...x.---....::x.:.xx:....----------..x......x..x..x.x:.:...:....:x.:..xx..:.:..-....::.::......:..:.-..x...:x-x..:::...x:..x:...:x...:xx..:x..........:-...--..x..x....-....x...x:.x.--....:-----....x.x...-------......xx.x....x.:.------..::....x.xxx.:...:x:....--..xx...-----:..:....x.:.:..x..-...... 18M4D39M4I13M1D13M4D27M4I17M6D52M1D100M1D110M3D17M10D44M1I20M1D8M1D41M1D3M2I10M1D13M2D5M5I10M7I18M6D25M2I7M5I18M1I6M 438/634 69.1% 665/94230402 0.0% 73/634 11.5% 128892769 61321786 +3011 chr4 + 190214555 173877215 173877214 173877253 39 AATATGTATCATATGTATACACACACACACACACACACA chr4 + 94230402 30834198 30834197 30834236 30834198 30834197 30834236 39 AATATGTATTATATATATATATATACACACACACACACA .........:....:....:.:.:............... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 143043017 47171538 +3051 chr4 + 190214555 173877219 173877218 173877264 46 TGTATCATATGTATACACACACACACACACACACACACATATATAT chr4 + 94230402 46140850 46140849 46140895 46140850 46140849 46140895 46 TGTGTAATATATATACACACACTCTCACATACACACACGTGTATAT ...:.x....:...........x.x....:........:.:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 127736369 62478186 +63810 chr4 + 190214555 173879306 173879305 173881388 2083 CTTTACTGTACATGTTTACAATGTTT-TCTTTTGCCAATTGGAGGAGACACTGGAGCTTAGGATAGACTCATGCACAGGGTTTATAGGATGTCAGA-CAAAATGATTTTT-ATTGAGGAAGGGTCAA----GTTGTGTTTTTCGTTGTGTCACACTATACAATATGAGGGCCATGTTATAAAAATTCAGAGCTCCCACAAGAAGGCAAAGGCTAAAAATGGTGATTTAAGACTACATTATCCTGTTTCTAATTCCTTTTCTTTCTTCCTGCGGAAATGTAATTGCA-GAAGCTGGGAGAAGGGATTGGAGTGTGGGCTTCTATATCTGTCTTGAAGAGAGTCGTAAAGCCTGTTTTACGAGTCTCTCTCTAGCCTCGTTCTAGTTTTCCAAATTAAAGGAGACAATATGACAATCTCACCAAGCTCTGATCTTACATCTTAATTTGCAAACTCAGCAGCAATATCAGTACCTGGTTTAAGTGGCTCAGACAAAACAGTGTTGAAATGGACTTATCCTTAGAAATTCAGTAAAAGGTCCTCTGTACTAATGCGGAGCCATTTTTTTTTTTTTAAAAAAAGAAACTTACAAACATTACAAAATTTATTTTTATTTTTTATTTATTATTTCCTAAAATTAACATGCTTAAAGTCAATTTCTTAGTTTTACAAATGTACTGTAGTAATGTAAGATGGTAACGATGGGAGGAACTTTGTGAAAGGAACTCTATGTACTCTATTTACAACAT-TTCTGTAAATCTACAACTAGTCTGAAACAAATTGATGTACTATCAA-TAACTACATTGTTCTTGTCCAGATAAAATTATAATGGGATAGCCTAAAGAC-TGGGGT-------AAAATTTGAAGGTTTTTTTTTTGTTTTCTGCTTATGAATTAACAGAGTTTTCAGGGTGTTGTTGTTTTATCCGTTTTGGTGATTTCAA-------GAACTAAGGGCATTTTTGTTTCTTAGCATATGTCAGGCAAAAGGACTTTATGAACTTGTCTGAAGCATTTT-CACCAACTGTTTGTTTATAGTCAAGCCAAATAACCCTTCACGTACTATGTGAAGTCCCCTTCACCTGCACCAACTTTGTCAGAGAACTGAGACTAAACCTTCACCAACAGTGTACCTTGAGTATAGCTTCAAAGGACCACCCACTTCTAGGGGTGAGAGGCTAAATCCGCCTCTCTGTCCGGCCCATTTTAA----GCCTTAGGAAAACAAGGA--------TTTCATTTAAACCTTCCCAAACCAGAG-----------------------------AGCATTTATTAACAGCTATGGTTCTAA---------TATTTGGAA----------CAAAGTCAAGATCAAACCTTAGTA----------CTATCT--CAGCAGAAGAAAGATTAGA---ATTAGTAGTTAATCTCACTGAAAATCCTTTCAGTGAGAAAAAAAATATGTGTGAGCTTTAACTACAATGATTCTCTGGCTAATGAGATGCCATTGATCATGTGGAGAG-GAAAGTAATATCCTTTGACATATAAAACTGTATACAGTGGTTATGGAATCTAAATCTATTCCTTTGC--TAGAGTGAAACATTACTAAT--GAAAACAAAAAAATGCATTAA-CCTGTAAAAAGAAACTAAATTTATTGACAAGAGTTTGCAAATCACAGTTAATTGAGTCTCAGATGAAACTTCAAATAAAGGAAATAATGTGGTAATTGGGCCCCTCATCTTATATAATATACTTGTTGGCATACATTATGGGTTTGCTATCTTTTAAGAGTATTAAATCATTGTACAAAAACATTGCCAAAAAGACTCTTCATTTCCTTTTAGTGACTTCTTACTGCCCTCAGTGGAAGTTTAATAGAAAAGGAAGGACATGATGTAGTTTTAATGACAGGAAACCCATGGCCTTCCAAATGAATAAATTCCATCACTAGCTGCCACAAAGTGTGCTAATTATTTCCTTTGATAAATTAAAAGCTGTAAAAGTCCGAAGTATATAAGCATGTGGTTTACAGTTATAATCAACCTGTCTGCATTATTGAAAGTTCATATTATCTTCACT------ATTTAATAAAGCATTA-----ATTTTTTATTCCAACAAATTGTATAGAAAGCATGTACATAAAGCATTAAACTTTTGCTGATTTGACAGATGATTAAATAAC chr4 + 94230402 44976060 44976059 44978038 44976060 44976059 44978038 1979 CTTTACCGTACGTGTTTACAGTGCTTGTTCCTCATCAATTGCAGGAGACACTATGACTCAGGA--GGCTCTTGCACAGATTTTATAGGATGTTAGAACAAAATGATTTTTTATTGAGGAAGGGTCAAACAAGTTGTGCTTTTTGTTGTGTCACACTAAACAATATAAGAAGCATGTTAAAAAAGCTCTGAACTCTCACTGGAAGGCAAAGGCTATGAGAAATGATTTAAAGCTACATTATCCTGTTTCTAATTCCTTTTCTTTCTTCCTGCGGAAATGTAATTGCAAGAAGCTGGGAGAAGGGATTGGAGCATTGGCTTCTATGTCAGCCTTGAAGAGAGTCATAAAGTCTCTTTTATGGGTTTCTTTCTAGCCTAGTTCTACTTTTTCAAATTAGAGGAGACAATATGACAATCTTAGCTAACTCTGATCTTACATCTTAATTTGCAAACTCAGCAGCAATATCAGTGCCCAAATTCAGTGG---ATATATTGCCGAGTTTAAAC--AATTTTCTATTGAACTGAAGT-AAAGGCCCTGTTTACAACTGTCTGCATATTACTTT----------AAAG------------------------------ATCTCCT--------CCCCCCAGATTTAATAGG-------------TTTTGATAATACA----TATTGTGGATATCTA-------------------AAGTCTGCCTCAATTAACCTGTCTGCTAAATCCTTGACACAGACTTCAAATACACAGCTGG-------CAGA--GTTGAACAATAAATTAACTGCACTGGAATTCTCTGAATCAAACAGCAAACATAAAGACTAGAAACATAGAATTCTGCCAAGCATTTTAAGATTTCT------TTTCCTACT-------------AAGTTTCTGAGGGCTG--GCTCAGATTGCTTACATGTTTTCAATAACTATTAACTAAAGTCAT---------------TATGTC---CGAAAAGATCTTAC------------AGTACTCTGTATCATCTATTCCTTCACATTT---CCTCACATCACTTAATAAAATACTTTAA-------------GCTCCAGCATTCTGGTGCTGCTGCGGC-----------------TGTACCTTGGTCATGACCTGGAAGGACCACCCACTCCTGTAAAAGAGTGGGTAAGTCTGCCTCTATGGTAATTTGATTATTAGACCGCCTTTGAAGAAAAAGAATGTGTATCTTTCAGTTGGTTTCGGCCTGGGCTGAGCTGCTTCTGTGATGAAGGTTTCGCTCTGCAGAAGCCGTTCGTAGCTGCGTGCATAAGGCAGAGGGTGTTTTGTGTGTATATGCTTAAAGGAGAAGGGAAATGTTATTGGGGCTTTTGCTTATTTTCCACTTGAAGAAACCCCAGATATTTTGCTGGTTA---TATTTGAAAAATACCTAAGAAAAAAGCAAAA---GCATTAATTTTAGCTAGAAAGAACCTTTAGTTAATGA---TCAATTGTTC---TGAAGGGAAAAAATAATATCCTGCGACATATAAATATAAATGTATTAGTTAAAG-ATCTAAATCATTTTATGTGCCATAAAATAAAGACTTGTAACTGGGAAACAAAAAAAATGAATTAAGCCAACGAAGAAGAAATAAATTTATTGAAGTGATTTTGCAAATCACAGCTAATTGAGCCACAAACAAAGCAGAAAATAAAGGAAATAATGTGGTAATTGGAACCCTCATCC-----------CTTATTGGCATACATTATGGG-TTGCTATCTTTTAGCAGTATTAAATCATTGCACGCAAACGTTGCCAAAAAAACTCTTCATTTCCTTTTAGTGACTTCTTACTGCCCTCAGTTGAAGTTTAATAGAAAAGGAAGGACATGATGTAGTTTTAATGACAGGAAACCCATGG-CTTCCAAATGAATAAATTCCATCACTGGCTGCCACAAAGTGTGCTAATTATTTCCTTTGATAAATTAAAAGCCGTAAAAGTCCAAAGTATAT-AGCATGTGGTTTACAGTTATAGTCTGCCTGTCTGCATTATTGAAAGTTCATATAAGCCTCattattttaatttaataaa-cattataattattttttaCACCAGTAGGCTGTATAGAAAGCATATGTTGAAGAC---AAATTT------GTCTAACAGAAGGTTAAATAGC ......:....:........:..:..-.:::.:::......x..........:x::..:....--.:...x.......:x............:...-.............-................----......:....:..............x.......:..::x.......x....::..x..:...:...x:..............x:.:x::........::.......................................................-.......................::.x.........:..x.:.............:.....:..x.....:.:..:...:........x......x....:.......:....................:.x.x.:.............................................:..:::x..x.....---.x.:.xx:.x.x...x...:--.x..x..:x.x...x.xx...-.....:...x.x...x.x..:xx:xx:...x:...----------....------------------------------..:.::.--------:::..:.:.x....:.x.-------------.:..::.xx....----..:...:.xx..x..-------------------..x.:..:xxx.:xx.x:..:.x.:..xx..::x::...:-xx..x:....x:...:..:.-------..:.--.x..x..x..x..-.....:..:..xxx..x..:::..x...:x::..xx:x.x..x...:.:..-.:.::.-------.:x....x...:...:.------...:..:..-------------.:x....x.:.x.:..--.:.:x:x::.:..xx:..x......-------x......:.x...---------------......---.:...:..::...:------------..:.:.:.-:.:..x..:..:x..:.:.x.:---..xx.:.x.x...x.::x.x..:x.x..-------------..x...:.x..x.x:x:xx:...x.:.-----------------.........:x:..::.:.x:..............:..:x:::x...x..x...:..:......x..x:x:x::x...x.x.----.....x.:.:..x...:.--------.....x..::x:::xx..x::x.x...-----------------------------..x.x:::..x::....::.xx:x...---------.:...x.x:----------:....xx:.::xx...:x...x.:----------:...:.--..x:x.......xx::...---x..:x.:....---.xx:......x:x::.x..x:.:..:x....---.::.x.::....:...x..x..x:..:.:.:......---x.x....x..---..:..:.-:...:.........x:..........xx.:x..::.x.:....x:.-.........xx..:x.x...--..:.:.:..:xx..::x.x.--....xx.........x.....-..x:::..:.::..x............x:x..x..............:........:.x..:.::..:.xxx...........................:x........:-----------...:.................-.............:x...............:..:x....:..........:........................................x........................................................-..........................:.............................................:..........:........-.....................:..x:...........................x.x.:...:.------..........-.....-----........:x...::.:::..............:.::xx..::.---...:..------:.:.:.....x.:.......:. 26M1I36M2D31M1I13M1I16M4I155M1I196M3D20M2D21M1D35M10D4M30D7M8D18M13D13M4D15M19D40M1I20M7D4M2D13M1I51M1I6M7I17M6D9M13D16M2D25M7I13M15D6M3D14M12D8M1I22M3D28M13D27M17D82M4I18M8I27M29I27M9I9M10I24M10I6M2I19M3I11M3D31M3D37M3D10M3D7M1I46M1D20M2I20M2I21M1I110M11D21M1D148M1D92M1D63M6I10M1D5M5I44M3D6M6D22M 1385/1861 74.4% 1979/94230402 0.0% 340/1861 18.3% 128903246 61311309 +3121 chr4 + 190214555 173897786 173897785 173897822 37 GGCTTTTTTGTTTGTTTGTTTTTTGGGGGATTTTTTT chr4 + 94230402 69930301 69930300 69930337 69930301 69930300 69930337 37 GGTTTTTTTGTTTGTTTGTTTTTTGGGGGTTTTTTTT ..:..........................x....... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 103967485 86247070 +3486 chr4 + 190214555 173899536 173899535 173899718 183 TGTTTTGTTGTGGTTGTC-------TTCCTTTCTCCCTTTCTCTCTCTCTTTCTTTCTTT---CCTTTTCTCCTTCCTTC-----CTTCTTTCCTTCCTTCTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTCCCTCTCTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792655 85792654 85792852 85792655 85792654 85792852 198 TGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ...:..x.:x.:...x..-------...x....x:.:.xxx.:x:::.:..:......:.---.:.x:...:.x..x..x-----..:x....x:.:.........x:....:.:::x.x.x.x::..:.x.x:..:.:....xxx:.:x:...:..x.::.x.:..x..xx.:......:...:.:.:....:.::. 18M7I35M3I17M5I113M 108/183 59.0% 198/94230402 0.0% 15/183 8.2% 88106881 NA +42337 chr4 + 190214555 173907007 173907006 173907692 686 CTCAGAGACATAATATTTTGGGAATTCATATTGCTTGTTTCTTTCTTTGTAGTTGCTTTAAAAGTAAATCCTTTAGGAGAACATTTCTTTAGCTTACTTTTTCATTATTTCCAGAGGCAAAAACTGGCAGGGCAATTTATAATTCAATTTTTGCTAAATCCATGACACCCAATATATATGTCAGGCATTTCAACGGCAGGGTACTTTGGGGAAAGGTGATAAATTGTACTGATTATAAGCTCAAGCTGTTCTTCTAAAACATCATATCAAAAAGAAGGTAAGTATTATTAGGAAAATGTAATGTATCTTTAGATTGTCCAGAACTATCAGAGATAATCACTTCATGTGAATATATTTCCCTTAGTGCTATACAGCAATATAATAAGGTTCTTACTGTGTTTTTGATAGCACTCATCTGGAGAAAGGTAAAAAAAGACCCTATCAGTTCACAAACCTATCACAGGCTGGTAGTCTTTCAGCAGCCACAGAGCTCTTAGTGCTGCAATAACTCACTCCT-GCCAGAAATGCCTCACTCTGAAACCCAAAACATGGCCCTAATCATTTTAGGACTATGTTGGTATATGTGAGTAGTATAAATATTATTTTATAATATAATCTCCTCTGATCTTTTTAAACATCCTTTCAGTG-TTCCAGGTATTTCCCTGTGTGATATGTGTGGCTTAAGC chr4 + 94230402 44986960 44986959 44987617 44986960 44986959 44987617 658 CTTAAAATGATAAAATCTGGTCAATCCATGTTTGTTGTTTCTTTTTCTATAGCCACT--AAAAATAAATCCTTCAGGAGAACATTTTTTTTGCTCACTTTTTCATTATTTCCAGAGGCAAAAGCTGGCAAGGCAATTTATAATTCAATTTTTGCTAAATCCACAACACCTAATATATATGTCAGGCATTTCAACGGCAGGGTACTTTGGGGATAGGTGATAAATTGTACTGATTATAAGTGCAAGCTGTTCTTCCAAAACATCATATCAAAAAGAAGGCAAGTATTATTAGGAGAATGTAATGTATCTTTAGAATGTCCAGAAACATAAGAGATAATCACTTCATGTGAATATATTCTCCCTTGAGTTTTACAGCTAAATATTAAGG-TCTTACCATGTTTTTGATAGCACTCATCTGGAGGGAGGGG--------------------------CAGTCACGGATTGGTAGTCTTTCAGCAGCCACATAGCTCTTGGGCTTGCAATAATTCATTTCTCCCCCAAAAAGGCTTACTATGAAACCTGAAACATGGTCATAATAATTTTCTGACTATGTTGCTGTATGTGAAAAGtataaatattattttataatataatCTCCACTGATC-TTTTAAACATCCTTTCAATGTTTCCATGTATTTTCCTGTGAGGTACACATGGCTTTAAC ..:.:.:xx....x..:.x.xx...:...:..xx..........:.:.:...:::..--....:.........:............:...x...:...........................:......:................................::.....:..........................................x..........................:x.............:.......................:..............:...................x.........x:..x............................::..:.x.x.:.x......x.x...x.....-......::.........................::...x:--------------------------.x:....:.::......................x.......:.xx:........:...:.:..-x..x:...x.x..:...x.......::........:.x....x.....xx..........x.:.......:x...............................x......-.................:..-.....x......:......x.:..::::......x.:. 57M2D328M1D40M26D63M1I110M1D20M1I38M 557/656 84.9% 658/94230402 0.0% 32/656 4.9% 128920047 61294508 +3047 chr4 + 190214555 173911359 173911358 173911410 52 ACATATGTATGTACACACACACACACACACATATATGCATATATATATATAT chr4 + 94230402 89823929 89823928 89823980 89823929 89823928 89823980 52 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..x...:....x.:.................:x...:xx........::... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 84087430 NA +7388 chr4 + 190214555 173920193 173920192 173920653 461 TAAATGCAGATTTT----AAATGGAAAT--GACTTTATAAAATCATTCTTAAAATTTGTAAGTATATACTGGCTCACTTTTTTTTTCGAACTGTCTCTTTTTTGATATAGTCAA-TATCTGTAGTTGTTATGTAAGAAC----ACAA-------TACATTTCTTTTGTATTTCCA--TTCAAAACTAGTTATATCTACAAGACAAATGGACTC-CTTTTTTGTGAAGGAAATTTGTAGAGATAAGATGAAGGGTAACTATCACTAAGAGTTAAATGGTGAC--TAAGTTGATAGGTGAAGGTTATCAGAAGGAAAATATAGAATGATGG------------------AAGGAATCACTTTGTTTTCTTATTTTCTGAAGCACTCTTTGAACTCTCTGATAAAACCAAA--TTTGTGACAAAGTGCCAAAATCTAA--AAAAAAATAA-------TAATATCAACTTGGTGGGGAAGGAAATATATTTTACTTATGTATTTTATTATCTCCTAA chr4 + 94230402 44991295 44991294 44991786 44991295 44991294 44991786 492 TAAATAGAGTTCTTGGGCAAATGGAAGTCAAACTTTC---AATTATTCCAAAA---------TAGATTCTGGCTCGCTCAATCT----AGCTGACACTTT---GATGTACTTAAATCTTTGCAGACGCTATGTAAGAACTGAAACAAGGCCAGCTACGCCCCCTCTGCTCTTACAAATGTAGAAGCAGATATATTTAAACAGTATGAGGACCAGCTCTCTCAAGAAGGAAATTTGTAAAGATAACATAAACAGTGTCTGTCATTAAAAGTCAAATGACTACTTTTAGATG-TTGGTAAGGGTTATCAGAAGGCAAATATGGTACATTAGATTATGCAACCTCATTCCAGGGTTTTGCTGTGTTTTCTTGTTGTATGAAGAGCACATCT-GCTTTCACATTAAACTAAGACCATGTTGTAGAAGACTCAATTCTGAATAAATAAATAAATAAAGCAAAAAGCAACACCCATAGTAAGAAAGTAAATTGTATTTATTTTCTTTACTGTATTTCAA .....:x..x.:..----........:.--:.....x---...:....:x...---------..x..x.......:..:xx.:.----.:...x.x....---...:..x.:..-.x.:..:..x:.:...........----....-------...::::.:.:..:x:..x..--.x:.:..x:..x.....:..x.x:::.x:x....:x-..:.:.::x..............:......x..:..x:..:x..:...:...:...:.....::x..--.x..x..-.x...:.:.............x......:.x.::x.:.------------------.:..xx.::..x.........:..x.x.....x:.x.x.:x-:..:..xx..x....:..:--:x...x::.:.:x:.:x..x...:.--...x......-------x..x.x....x:xxxx:.x...:..:..x...x..:....x.x:....:.:.x.:::.. 14M4I10M2I7M3D13M9D22M4D12M3D11M1I24M4I4M7I21M2I36M1I67M2I7M1D38M18I41M1D19M2I25M2I10M7I59M 292/440 66.4% 492/94230402 0.0% 73/440 16.6% 128928898 61285657 +19470 chr4 + 190214555 173924610 173924609 173925215 606 GGCAACTAGTTAATGAAAATCATAATGATATCAGTCTTTTTGCACTGGAAATATGCACTCCATCGTGCTCAAATGGTGGGGAGTGCAGATCTC-TGATAAGACTAGGGGA-CTGTGGTCGGGGTTAGGTCGAAGGCATAAAATGCCTTCGCACACATGAATGCTTACCATGTGTGACCAAGTGGGAGGAAACTGTGGTGAGACAGGGAAGGAGAGAAATAACTCACTTAGTGTCTGGCATGATGATGTTGAATCTCTTCAGTAATGATTTCTGTGTTGTGTGTGGGTTATGGGAGTTTGATGTTGCTTTATGCCTGATGCAAAGAAATGC--CTTTTGGCTCAGATTAGGTTGTGATCACTTCAGTTTGGCACCTAGTTACC-AGTGTCAGCATTTACAGTTCATTCCCAGCCATGGGTGCAGTAAGTCTCTGAGATCTCAAAAGCTGTAGGATGCAACCCACATTGCCTTCTGGCCTTCGAGGACCATGCCAAATTCCTTAAAGCAATGACAGCTAAGGGTCATAAGGCGGCACTG--ATTCTACCTATGACC-CAGTTTATTACACTATGTCAGTAGCAGCTCTTGCAAATTAATTTTGCTCATTACAGCAG chr4 + 94230402 44993080 44993079 44993644 44993080 44993079 44993644 565 GACAACT--TTAAGAAAAA--AAAGTGATGTCACTCTTTTTACATTGCAAAAATGTAGTCTAACGTATCCTGGTGATGGGGAGTGCAGATATAGCGATAGGGCCAGGAGAGCTATGCTTGAGGTTAA----------------------------CTGAATGCCTAACATGTGTGTCCAAGTGGGAGGAAGCTGTGGTGAGACAAGAAATGAGAGACATAATTCATTTAGTGTCTGGCATGATGACTGTGAATTTCTTTAACGATGATTTCTGTATATTGTGTAGGTTTGTGGGCTTTCGTGT--CTTTATTGCTGTTACAAAGAAGCACATCTCTTTGCTAGGACTAAATTATGATCACTTCAGTTTTGTGACTGTTAATCAAGGGAAGGCATTTGCAAGCCTTTCCCAGCCACATATCCTTTGAG-------GGTTTCGAAAGCTATAGAATGCAGT-----TTGTTATCTGTCATTAGAAGGCTGTGCCAAGTTCCATGATGCAGTGAAAACTCA--GTCATACGCTGCAGCTGACACTTTCCCACTGACCTCAGCTTGTTACATTGCATAAACAGAAGCTATTACAAGTCTGTATAGTTC-TTGGAGCAG .:.....--....x:....--.x.:....:...x.......:..:..x...x...:.x..:.x...:::.x::..:..............x.x-:....:.:.:...:..-..:..x.:.:.....:----------------------------x.......:..x........x..............:.............:.:..x......x....:...:...................:xx.....:....:.:::...........:.xx.....:....xxx..:x...x:...--......xx...x.:.......:::.--..:..x...x:..:..::..:...............x.::x..:x.x.:.-..x.xx:......:..:x:.x..........::x:.x.xx.:..-------.:.:..:......:...:.....::-----...::x....x.x..x..:.:.::......:....x.:.x...:...x.:..x.--......x.x:.xx:...--.:.:.x..xx.....-...:..:.....:.:::.x.::..x....x..:...:.:x:.x.x.:..-..:x..... 7M2D10M2D72M1I16M1I16M28D148M2D25M2I50M1I44M7D25M5D54M2D17M2I15M1I49M1D9M 396/557 71.1% 565/94230402 0.0% 57/557 10.2% 128931530 61283025 +32355 chr4 + 190214555 173930117 173930116 173931081 965 TATTGTTAGGATAAGATAATTACGATTGTAACAGCTAGTTTAAAAGAAGTGTCAGTTGCTCCTGTTTTATTTTTCACAGGATAGAGCTGCGG--CCTGTCTCAGTATGATGTTTTCAGGATCTG----GTATATAT---TTTTATTTTCCTACATGAATCTTTCATCCTTTTACTGACATTTATTCATTTT--ATCTAATTATCCTAAAAGGAAAGCT-CTGGCCAGGCAAATTGGTTGTTGTCTGCCTCTGAAGAGACATTCATATCGCGTCGCTTAGCTTTCAAGTTTTGTGATCAGGAACCCTCAGGCCCATTTTTAAGGAGGTTTCAGGCTAGCT--GAGCTTCACTGTCTCCCAAAATGTACAAAATGAGATTACATGAGGGACAAGATCAATTTACTGGAAGGTACTTAAGCAGTAAATCTGGAGCTTTTTGTCCAGTCACTATTGCTTTCAAGCTTTGTAGCAGAAAATTAAGCCACAAGAGCTTTGACAAATTAGATATTACTACCTCTAATTGTGTATGTTTAAGCTTATCACACTGAATTGCAGCATTGTAACTG-ACTATTATGCCAACAAGGCCTTCGTTTAATCAGCGCAGTGCCATTTAATCGCAATTAATCACTCAACTAAAATGTCATATTAAGGTCACAGAAACTTGAAGGGCTAAAAGAAAAGAGAACATTAAAGTCAGCTGATGG----AGGAAAAGAGCATGGTGTGCCAAGGGAAGTTCTGAG-CACTCTTTTTCATTAGAAGCTGGTAGAACATTTAAT-GAGAATTCAGTCTTAACTTTCAGCTGAGATCAGAACAACGTGC-CTCACTTGGTT--AAGCAGGAGACTATTCTGCCCATTCTTAGCGGGCTTCTGTCTGTAAATAGGATACTCCTGCCCACAGAATACCTGAAATT--------------------TTACAGATTCATGATTTTTATTTCTATTATTCTTTGGCTTTCTGGCATTTTCCCCTTTCCTATTACTTTT chr4 + 94230402 44997074 44997073 44998056 44997074 44997073 44998056 983 TAGTGTTAGGAGAATACAATTTACATAGTAGAAACCTGGTTGATTACAATGTCAGCTGCTGTTCTTTTATTTATGAAATTAAATAGTCATGATTCTTTTTTCACT-TAGTGTTCCCAG--TTTGAACAGTAGAGATGGATCTTTTCTTTCTCAATGAACCTTTTATCCTTTTACCGACATTTATTCTTTTTTTATTCAATTAACCCAGAAATAAAGCTTCTGGCAAGGCAAGTCAGCTGTTGTCTGCCGA-AAAGAGACATACAAATCTTGTCACATAGCTCTTA-TTTTTATGGTCAGGAACCCTCAGGCCTGGTATTAAGGCAACTT-AGGCTTGTGTGGAACTTTACTGTCTCCTGCACGATCTGAAATAAGATTACATGATGGAGAAGATCAATTTACTG-AGGACATTTAAGCTCAGAATATTAAGCTTTTTGTGCAATCACATCTCCTCTCTAGTTGTGTGGCAGAAAAGCTAGCTACAAGTTCCTTGACAAATTAGATATTACCACATCTAACTGTGTATATTTAAGCTTATCAAACTGAATCGTTGCATTGTAACTGTGCTCTTACGCAGACAAGGACTCCATTTAATAAATGCAGTGCCATTTAATAGTAATTAATCACCCAACTAAAATGTCACATTAAGGTCAAAGAGACCAGAAGA---CAAAAAGAAGAGAACATTAAATTCAGCTGACAAACATAGGAAAGGAGAATATAGAGCCAAAGAAAGTTCTGGGACACT-----------GGCACTGGTAAAACATTTGATCCAGAAT----TCTTAACTTTCTGTTCATTTGAGAAGTACTCACATTCACTTGGTTCAAAGCAAG-GTCATTTTTGTAACTTTTAAATGAAATTTCGTCTTTCTGTGTGCAGTGACAGCCCATTGCAGGCTTGGAATTAGTGGTGCATTTCATAGACGTTACGTTCTCAGTATTTGCAGTTTCCTTCctctctgcttctctctctctctctctctctTTTTTTTTTTT ..x........x..x.:....xxx..x...:x.:.:x.x..:.xx:x.:......:....x:.x........x.x.x.xx.x.x..::::.:--.:.x.:...x.-.::....::...--.:..----...x.x..---.:..x.:..:..xx.....:....:..........:...........x....--..::.....x..:.:..:x......-.....x......:.::.:...........xx-:.........x..x...x:...:.x.....:.:.-x....:..:.................::x.x......x:::..-.....x.:x--..:...:.........::x.xx:.x::....:...........x...x...............-.:.::.:......xxx:...x.x:..........x..:....xx:.x..:..x..:.x...:........x:x...:.....xx.:...................:..x.....:.......:.............x.......:.:x............-:..x...:..x:......x..:.:......x.::...............x.:..........:..............:..........x...:..:x....:---x...:.:..............x........:::----......:...x..:xx.x.....:.:........:.-....-----------.:x:......:.......:..-x.....----...........x.:.x.xx.x....xx..x::.-:..........--.....:.-.x.xx..:..:xxx..:.x.::.::x..::....x.xx:.:x.xx::xx.x.....:x.x.x:.:..:....--------------------....:xx:...xx....x:.x..::x..x:...:..x:.:...xx.x:.:..:.::.:::.x..x:.... 92M2I11M1D12M2D4M4I8M3I52M2I25M1I31M1D34M1D43M1D9M2I63M1D160M1I102M3D33M4I36M1I4M11D21M1I6M4D33M1I11M2I7M1D72M20I70M 670/939 71.4% 983/94230402 0.0% 70/939 7.5% 128933043 61281512 +15684 chr4 + 190214555 173934952 173934951 173935323 372 CCTTTTATTTGTTTTCTTTTCAAGATATAGATGATA-TGCCCCTATC----CAATGTACAGTTTAGTGAGATGGATGACACTTCACTCACTGGCAGTTCAAGGAAGTCTTAGCCTAGCTTGTTTACATGAACACGTTTTAGAACAGCCATATAGCTTCCAGCCAGCTCTACCCTGCTGCCCAGCACTAAGGGGGAAAGCAGGCAGTGAGCCCATAGGTCGCTGATAAACTAACTCCCCATTTGGCAAGCAGGGAAG--GGAATGATAAGGGCTCTGATTTATGTTTTATCTGTCGCTAAGTTTT-------------CAGCCAGCCTGAAATGACTTGGTTCTGTTATCACCTCAGATGCCACAGGTTTCTTAAGTGAGGCAGATTCTTTGG chr4 + 94230402 45002039 45002038 45002421 45002039 45002038 45002421 383 CTTTTTGTTTGTTTTCTTTCCCAGATGCAGGAGACGCTGCCCCTCTTGGGGCAGTGCA----TGAGGGAGATGGATCGCACTCAGGTAACAAGCAGTTCAAGGAAGCCCTTCACTGTGTTGTTTACACCAGCACCTTTTAGAGCAGCCATTTAGCTCCTACCCAGGCCCGCCCCACTGACCAGCTGTAAGTGTAAAGGCCGCCAGTGGGCCCGCAGGTCGCTGATAAATGAAACCCCCATTTGGCAGGCAAGGAAGCCAGGATGATAAGGATGTTGATTTATGTTTTATCTATCACTACATTTTCAGTAAAGCTGGGCAGCCAGCCTTAACGGAGTGGAGGCTGTTATCACCTC-----CCCTTAGCTCTTTAAGTGCAGCAGGCTCTTTGG .:....:............:.x....::..:x..::-.......x.:----..:..:.----.x..x.........x:....:x:x.x..x:..............:.:.xxx..:xx.........:x.:...x.......:.......x.....:.:.x....x:.::...::...x.....xx....x.x:..:..x.x.....:....::..............:x..x:............:...:.....--:.:.........::x:.................:..:...x:....-------------..........x..xx..x.x.:xx.............-----..x:x:.:.::.......x:....::....... 36M1I10M4I7M4D194M2I46M13I37M5D33M 268/363 73.8% 383/94230402 0.0% 29/363 8.0% 128932913 61281642 +3548 chr4 + 190214555 173937877 173937876 173938018 142 TCTGAAGCTTCCTGTTGCTGTACAATTGACTATAAAAGAGTTCATTTTCCCTATAAAAATATTTTCACTTTATTTAT---GTTCCCACTTTTTTTTTACCACAA--------TTTAAAAAAACCACTAA-AAGCACAACATAAAAATATTTATA chr4 + 94230402 45005501 45005500 45005641 45005501 45005500 45005641 141 TTTGCAGCTTCCTCTTGCTCTCTGATACTCTATAAAACTGTTTATATTCACCGTAAAAGTATTTTCACTCTGTTTGCACAGTGACCAC-------GTACCACAAACATTCCCTTT------ACCACTAACAATTGTGAAATTAAAATGTTTACA .:..x........x.....x.x::..xxx........xx...:..x...x.::.....:..........:.:...::---..xx....-------x........--------...------........-..x::::.x..x.....:....:. 77M3I8M7D9M8I3M6D8M1I24M 95/129 73.6% 141/94230402 0.0% 25/129 19.4% 128932376 61282179 +3147 chr4 + 190214555 173938217 173938216 173938274 58 AAGAAATAAGATCATCATTTTGTTTTTGTTGTTGTTTTTTGATTTCCCTTTTCTTTAA chr4 + 94230402 89365048 89365047 89365105 89365048 89365047 89365105 58 AAGAAAAAAGAATACTTTTTGGATTCTGTTGTTGTTTTTTGTTTTTCCTTTTTTTGAA ......x....x:.::x...x.x..:...............x...:......:..x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 84573169 NA +26588 chr4 + 190214555 173945043 173945042 173945684 642 CTCCAAATGTGTAAATCCTATATAAGCCAAACCATATGGTATAAAATGAATACATTTTCTCCCTC-TACCTTTGGCAAAATGGTTTCTTACTG--GATTTTATATACAGGAAAGTATTAACCCACCTTTTGCCATGTAGTTT-CTCCCTGATATATGGCATTGATAATATAAGTAGTTCAATGATACTTCCACTGTTTGTGTAGCTCTGCGTATAAAAAGAATGCTGTGCACATAGTAGAAGTGCTAAAATCCTGGGGTAACACCTCATACATTAGTGGCCTTCCATGGTGAACAAAGTCATTTTTCAAGCAAGTCATAAAGTAGCCTAAAACACAAGTGTTTCAGTGTTTGCTCCAAATGAGGCAGTGGTCCGGGGACTGCCGTTCATCTGACATCATTTCTGACACAGCCAGCGCTGGTTTGGTATCTGATTAGGACTCCCCGCCACAGTGGTGCCAGACTTACTACTTTAAGTGAGGTGGCTGAGGGAAATTAATGTGTCAGAGTTACCAGGAGGCGAGAGTGTTTGCTTCAAGTTTCCTTTGGAAAGCTTCAGCTGGAATTGCCTTTGATTCTTTCCAAGAGAATCTTTTGAAGCTATTTATGGAGCTTGGTAATAGGTGAAGATGAGCTA----CCAACAGGAAA chr4 + 94230402 45010672 45010671 45011314 45010672 45010671 45011314 643 CTACAGGTGTGTAAATCTGGTATAAACCAATTTAGA--GTGCAAAACTAAAATATTTTCTCCTTTATACACTTTCCATCATTCTATTTTATTGAGGATTTGAAGTGCCAGAAAGGATTGCCAAGCTTTCATCTGCTTAACTTACATGCTGATTGATGAGCTTGATAATATGTGTAGTCTAATGATATTTACGCTGTTTGTCCAGCTAGGTATATTAAAAGAATGTTGAGAAAATAGTAGACGTGCTAAAATCCTACAGTAACAGCTCATACTTTAGTGGTGTTTCGTTGTGAACA--GTCATTTTTCAGCCGAGTCATAAAGTAGCCTAAAA-ACAAGTGTGGCACTGTTTGCTTCAAATGAGACTGTTGCCATGTGACCACCATTCATCTGACATCATTACTGACATAGCTTTCGTTAGTATGATATCTGATTAAGGCTTCCAGCCATGGTGGAGCCAGACTAAGTAGTCTGAGCGAGGTGGCTGAAAAAAGTTAATGTGTCAATGTTACTATT-GGTGAGAGTGTCTGCTCAAAGTTTCCTTTGGAGAACTAGGATGGAAATGATTCTTGATCTTTCTAATGGGAATCTTCTGAAAATATTTCAAGATC-TGGTAGTAATTAAAGATGTGCTGAACTCCAATGGGAGA ..x..::..........:x:.....:....x::.x.--..::....:x..x.:.........:.:-...x:..xx..xx..xx.x.:...:..--.....x.x:.:.x:.....x...:x.xx:.:..:xx.:::x..::..-.x:x.....xx...:xx..........:x.....::.......:..x.:........x:....xx.::...x.........:..x.x.x........x.............:x:......x.......x.......:x..:.:.x.......--...........:x.:....................-........xx..x........:........:.x..x.:.xx.x...::..:................x......:...:xx..:.:..x..:..........:.:..:..x....::....x........x.x..x.:.:..:...........:::..:...........:x.....:.xx-..:........:....:x..............:.:..xx:::x.:...x::::.....::..::x.x.:.......:....:x.....xx:..x.-.....:..:x.:......x...:----....::...:. 36M2D27M1I27M2I47M1I152M2D35M1D182M1D95M1D23M4I11M 457/635 72.0% 643/94230402 0.0% 15/635 2.4% 128934371 61280184 +9288 chr4 + 190214555 173951348 173951347 173951788 441 TTTCATTTTACAAGCATTGGGATGACCATTAA------ACAACTCTTT----GGTTGCTCAGAAAT----------------TTTTAATTATGGCAGGATGGATAGGCATGCA---ATGTAACACCAAAAAATAGCAATTCATTACTTTGATGACACTGTACTTAAGAAGCAAGGGAGTTTGTTGCTGAGTACTTTAGCCGATAAAGCATTCATTTTTCACCTCCTCTCAGATCTCAGTTTTGGCTGCCTCTGATTCCTTAAGTAAAATTAATTTTGTTATGTCGACTATGCTACCATTAGTTGATAATCCAGGAGGCAAGAGATGCCATGCATATTTCATCATTCCTTCGCATCACAGTGGTTCTGAACATGGGCTGAATATAGACATCGCAGGT-GTGCTTCGAGATGACTAACTTAAACTTTAGCTCAGAATTTTTAAAAGCTGG-----ATAAATTGTTGACAGTTTGAGTA chr4 + 94230402 45012792 45012791 45013245 45012792 45012791 45013245 454 TTTCAAATTTCTAGAAAAATGCTGAGCATTAACATACTACAGCTTTTTCATTGATTGCTCATATGTGTCTATTCTTCTTTTCCTTTAATTAGGGAAGGTTGTAAAGTGATGAATTCATTTGACATTAGACT-CAGCAACACATTACTTAGATGAAATCGCACTTAAGA-GTGCTGTGGACTGGATCTGAGTAGCTTAGCTGATAAGGCACTGGTTTGTCATCTAC---AAGACAACAGTTCAAGACTTCTCTGATTTCTTGAGTCAAATTAATTTAGTTATGTCAGCTATGCTGCCATAAGATGATAATCCAAGCCACATG-GATGCCAGACATACTTCTACCTTCTTTGGCTTGA--------CTAAAACTGTGT----TAGAAACACCGGGGGTAGTAGTTAGA----ATTCATTTGAGGTGTAGTGAGGAAACTGGAAAAGTTGAATTGCATGAATTATAGACAATGTGTGTA .....xx..x.x..x.xx:x.x...x......------...:..:...----.:.......x.x:.----------------:........x..x...x..x.x..xx...x.---..x.:...::.:.xx-:.....:x........x.....x.::.:........-.::xx.x:.x:..xxx.......x:.....:.....:...:.x:...x...:..x.---x...:xx.....:x:.x:x:........:...:...x..........x........::.......:....x..x..........:.xx:..x.-.......x:....:...xx.x...:..x..x.x.--------..:..xx..x.:----..x.:...:..x:...-..:x..x..----.:.x.:..:.:x.x...:xx:...x:.xx.....:..:-----..:....:.x....:.x..x... 32M6I10M4I14M16I31M3I15M1D36M1D56M3D93M1D34M8D12M4D16M1I9M4D38M5I23M 286/419 68.3% 454/94230402 0.0% 57/419 13.6% 128938556 61275999 +23312 chr4 + 190214555 173979860 173979859 173980296 437 TCATTTCAGTTTT-TGTGTTTCTCCTCACACCTATACTGGTACTGAAAG-GATGCAACAGAGTCATCAGCAAATATACAACT--TCATATCAACTAAAGGTACTTTACACAAGAGAAGAGACTCCAAGGCAACAGATTTCCTATAGCAGTCTTTTCCTAAGAGTACTAAGGTAATTAGCCTCAACAGGAGATAATTTCGGTTCACAGGGGTTGCTGTTGTTTTAAGTGTTTCTGGGAAAATTGGATTTTCCATTGATAGCAGTTTTAACATGTCACACTGGAGCCAGAGTGAATTAAACTGAAGAGCTACACAGTCTAAACAAACATTCCTTCCCATTATCAGAAGCCTGACAACATAATAGCATAAACTATAGTCATGTGGTCACATTCACAAGTAATGCAGAAACAATTAAAAATCAA-AGAAATGCTACATTTTGTAAA chr4 + 94230402 45029675 45029674 45030100 45029675 45029674 45030100 426 TTATTTAAGTTTTATGTCCTTTCATAGACACGTAAATGAATAATGAAAAAGGTGCAATAAA------AGCAAACA-ATAATTATTCATATTGACCTGAGGCATTTAATGAAACAGAAGAGAGTCTAAAGAAACAGATTTCCTATAGCACTACTTTCCTAAGTATACTAAGGTAATTAGCTTTAAGAGGAGATAATTTCGGTTCACTGAGGTTGCTCTT---TTAAGTCTTTCTGGGAAATTTGGATTTTCCATTGATAGTAGTTTTAACATGTCACACTGGAGCCAGAGCAAATTAAAGTGAAGAGCTGCACAGTCTAAACAAACAGTCCTTACCATTATCAGAAGCCTGACAACATAACAGCATAAACTATAGCCA------CATACCCACAAGTAATGCAGGAACAATTAAAAAATAATAATAACATTGCAATCCATAAA .:....x......-...x:..::x:xx....x..x.:x::..x.....:-.:.....:.:.------......:.-.:..:.--......::..:x:...:.:..x.::x..x........x..:..:.x..................x.x:.........x:................:.:..x....................x.:.......x..---......x...........x...................:.............................::.......x.........:.................x.....x..........................:..............:..------..:.::..............:............x:..-.:x..:::.:..x.:::.... 13M1I35M1I11M6D8M1D6M2I134M3D156M6D37M1I21M 343/421 81.5% 426/94230402 0.0% 21/421 5.0% 128950185 61264370 +3073 chr4 + 190214555 173983647 173983646 173983726 80 AGGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAGAAAGAAAGAGAAG chr4 + 94230402 86089086 86089085 86089165 86089086 86089085 86089165 80 AGAAGGGAAAAAGTGCAGGGAAAAAAAAAAAAAAGACAGGGGGAATGAACAAGAAAGAGAGATAGCAAAGGTGGAAGGGG ..:.::....:.:x.x...:..:...:...:.....x..:::...x...x:...:.:.....x..x:..:.x:::..::. 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% 87894561 NA +21242 chr4 + 190214555 173990665 173990664 173991192 528 TGGAGAATGTGTGTACATTTTTTAAAAAATCAAATACCTTACCTTCTTGATAAATGGCTCATAAGGGCACTACTAC-CAGGAGTCGCTGAAGGCAGAACCCGAGCTTAGGTATTTTAAGTGGCATTACATGTTCTCTTCAAGTTCATAGGGTTAAACAGGTAAGTGGTTTCACAT-----GTGGTTCCTTCCTAAAAAATGAGGACAATAATGATGAGCTAGCCACTTTTTTAGAGGTGGAAAAAAACTAGTTAGAATCCACGCTCTCTGGAGACAGAGTTCTG-CAGTAAGTGGAACCTTCTGACGATGGAGCCTGGAGC-CAGCAGCTGGGTTCTGTCA-CCCTGACTGGGGCGGCCCTGTTAGTGTAGCGTGACCCCTGGCGCATTCGCACAGATAATACCGGCACCTCTTTTCACTCTAATCTCCTACCCGTCTGAGCAATTCAGCAGGAGATAGGGGCATTAAGGCCGTATTATTCCAAACAACATTTAGCTGAATGGTAGCTGAAGATTGTGACAGCAAAAGACAAATTCT chr4 + 94230402 45033370 45033369 45033896 45033370 45033369 45033896 527 TAAAAAATATGTCTAAACTTTTCTTTGGAGTGGA-GCGTTGCCTTCTGTTGCAGAGATGCACGAGATCACTTTTAAGCAGAAACGGGTGAAGTTAAAACTTTGTTTTACCTGTTTAAAATA--AGTATTTGGTACCTTACAGTTCACAAGGTTAAAGAGGTTAATGGTTTCATGTATACCGTAGCCTCCTGCTAAAAA--GAGGACAATGATGATGAGCCAGCCACTTTTGCAGAGGTGGAAAGTAACTAGTTAGCATAGTTAATCTTTTGAGACACAGCCGTGGCATTAAGTGGATTCTTTTCA---TTCAGCTGAAGGCGCAACAGCTGGATTCTGTCATCCCTGACTGGGGCGGTCTTGTTAGTGTAGGATGACCTCTGGAGCACTAACACAGATAATACTGGCACCTCTCTCTGCTCTAATCAACTACCAGTCTGAGCAATTCTACAGGAGATGGGGGCATTAAGGCCATATTATTCTAAACAAAATTCAGT--GATGGTAGCAGAGTATTGTGACAGCAAAAGACAGATACT .::.:...:...x..x.:....:xxx::.x:::.-:.x..:......xxxxx.:x.::x..::..:x....x:..x-...:.::x.x.....x:.:...::x:x:...xx.:...x..:.:--.x..:x..x.x:...xx......:.:.......x....x.:........::.-----..:.:::.:.x.......--.........:.........:..........x:...........:x..........x..xxx::x...:.x......x..::x..-..x........x:...:.x.---.xx...:x:::..-..:.......:........-...............:.:...........x:.....:....x...:.x:............:.........:.:::........xx.....x.............x:........:..............:........:......x...:..:--:........x..:x...................:..x.. 34M1D41M1I44M2D52M5I18M2D84M1I20M3D13M1I19M1I154M2D39M 376/518 72.6% 527/94230402 0.0% 19/518 3.7% 128957295 61257260 +3131 chr4 + 190214555 173995258 173995257 173995329 72 TATGTGTATGTGCATATATATATGTACACACATATACACATACACATATACA-----------CACATATACACACATATACA chr4 + 94230402 23247723 23247722 23247805 23247723 23247722 23247805 83 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA .:........::..:.:..x....x...:.::..:...........:.:...-----------:....:x.:.x.:.....:. 52M11I20M 52/72 72.2% 83/94230402 0.0% 11/72 15.3% 150747535 39467020 +3225 chr4 + 190214555 174019005 174019004 174019059 55 CATCTTTCTTTCTTCCTTCCTTCTCTCCTTTGTTCCTCTGTCATTTCTTTTTTTT chr4 + 94230402 24995424 24995423 24995478 24995424 24995423 24995478 55 CGTTTTTCTCTATTCCTTCCTTCCCTCCATTGTTATTCTGTTGTTTAATTTTTTT .:.:.....:.x...........:....x.....x:.....::...xx....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 149023581 41190974 +3087 chr4 + 190214555 174037012 174037011 174037108 97 AGACACAGATCCTAAAAAAATAAAATAAAATATGAAAGCAATGA-AGTTCCTCCTC-----TTTTATTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAAAGAG chr4 + 94230402 64144274 64144273 64144370 64144274 64144273 64144370 97 AGGTTCAGATTCAGAAGAAA------GAAATCTCAAAACCCTAAGAGCTTCCACTCATCACTGCTATTTTCTCTCTCTCTCTCTTTTTTGTTTTTTCAGATAG ..::x.....:.x:..:...------:....x.x...:.xx.:.-..:.:.:x...-----.x:.........................x......:.:.x.. 20M6D18M1I11M5I42M 67/91 73.6% 97/94230402 0.0% 12/91 13.2% 109892738 80321817 +3066 chr4 + 190214555 174037072 174037071 174037104 33 TTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAA chr4 + 94230402 8813870 8813869 8813902 8813870 8813869 8813902 33 TTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 165223202 24991353 +45207 chr4 + 190214555 174037099 174037098 174038017 919 TTTTAAAGAGCATCATAAAAAAGTT-TGTTTTGCTGGCTAACAGCAGCGAAGGTACAAAGCTTTCTTCGTTAGGGTTT-GCTATTTAAACCATCAGC-TCATTCTGCAAGAACATCAAACATGTGTCTACCAGATGCTGGGCAA--CAGCGCGATACTAAGGACTTGACTCAAGTGAACAATAATCTGTGGACAGCGGGTGTGAACCCGAGCTGGGCCAACACCTCATCAGACCGAATGGCTAATTGATTTCAAAATTAGACTCGGTATTTCTGAACAATAATCTTGAAAGGCAGCAATAAAATACATCAGGATCCTTTGAGCTGGCCAAGCTTTCATCCAAATGGCTTATTACAAAGAGCTGGCACACCTGAACTTTGGCACAGTCAAATAAATCCAAAAACAGCAAATGGAAACCACATTTGGCACTGGAGGTTTGTCAAGAAAAATTTGTATTCATGAGGAAACATGATTTTTGATTTTGAAATTATTTGGGGGTTATCGGTGGGAAGTAATTCATTGAATATGTATTTGACTCTGACAGCTATGATTTATGCAAC-AAAATATGCACA-ATAGGTA-TGTGAAGG--------------------CTTTTGAGAATCACATAATCTTTGGAACACCAGGA--TCAGCCAGGGCACAGCAAGGGTTAGTGTAGCTCCATTGGTGATAACTTAATCGCATGTGTAGGCCTACCCCTTTGAACTCTGAATAACTGCTTTGTGGCATCAGGGTCCACAAGGGTTTAAATCTGACTGCACTGCAATGACAATAAATTATA-CCAACTATTTAAGAAATGCTTGGAATCTTATCTTGCCTTCAGAGTGAGCAAACTAAGATTACAATTCCTGGCTTAAAACATGGCATAAATTCTGAGAACAAA------CACGGAAAATTTACACAATGGCAAGAGTGTATTTCACTACTCTTCTCT chr4 + 94230402 45047914 45047913 45048839 45047914 45047913 45048839 926 TTTTACACAGC--CCTGTAAAAGTCATGTTTTGCTGGCAAACAGCAGCAAACTTGCTAGGCTTTCTTCATTAGAGCCTCGCCATTTAAGCCATCAGCGTCATTTTGTGAGGACATCAAACATGTGTACACCAGATGCCTG-CAATGCAGAGCAGCACTAAGGACCTGACTCAACTTAACAATAATCTGTGGACAGCGGGTGTGAACCTGAGCTGGGCCAACACCTCATCAGACTGCATGGCTAATTGATTTCAAAATTAGAGTTGGTATTTCTGAACAATAATCTTAAAAGGCAGCAATAAAATACATCAGAATCCTTTGAGCTAGCCAAGCTTTCATCCAAATGGCTTATTACAAAGAGCTGGCACACCTGAACTTTGGCATAGACAAATAAATCCCAAAACAGTAAATGGAAACCACATTTGGCACTGGAGGTTTGTCAAGAGAAGTTTGTAGTCATCAGGAAACAAGATCTTGGATTTT-------TTT---CCTTAGTGGCAGGAAATCATTCACGGA--ATGTATTTTACTACAACTGCTGTGATTTATGTAATGAAAATGTGAAAATGTAAGTAGTGTTGAGGAGAATACttttttttttttttttttttGTATTTCACAATCTTCAGGAGCCCAGAAGCTCTAAAAAAGCACAGCAAGGGTTACAGTTATCCCAACAGTGATAACTGAATAGCATGTGTCGGCCTCCCTCTTTGAACTTTGAACTCCTAGTTTGTGGCATCATCGTCCAAAAGGATTTAGATCTGACTTTTGTTTGGCTACAATAAATTATACCCAAGTATCTGAGCAATGCCTGGAATCTTATCTTGAGGACAGGATGAGGCATCTCA---------------CTTAGGGGATGGTATAAATTTGGAATACAAATCTTTCCAGGGAATAATTTCAGACCAGGTAGAAAAGATTGCTTTTTTCTTTACT .....x.x...--.x.:x......:-............x.........:..xx.:.x.:.........:....:.::.-..:......:........-.....:..::..:...............x:.........:x.-...--...x..:::.........:........x.x...............................:.........................:.x.........................x.:......................:........................:............:.........................................................:..x...........x.......:......................................:..:......x....x........x...:..x......-------...---xx...x:..::....:.x.....:x..--........x...x::..x...:.........:..:-.....:..x.x.-:..:...-...x:...--------------------:....xx.x..:x..:......::.:.xx....:.--..x:xx.::...............xx..x:::...x::.........x...x........x.....x..:.........:....:xx..:x............xx.....x....:....:........x:xx.x::::x.............-....x...:.:..x.....:...............xxxx...::....xx.x..x.---------------....:::x....:.......:x..:x.....------..x....x.x..x..x.x::.xx...:x:x...x.x:.x:....:x.. 11M2D12M1I52M1I18M1I42M1D3M2I336M7D3M3D27M2D35M1I12M1I7M1I8M20I35M2I153M1I56M15D31M6I48M 712/889 80.1% 926/94230402 0.0% 67/889 7.5% 128989185 61225370 +3427 chr4 + 190214555 174038072 174038071 174038152 81 GAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGCAAACAACAGAGTATGTCTGG chr4 + 94230402 32089568 32089567 32089648 32089568 32089567 32089648 81 GAAGGGGGGGTGAAGAGAGAGAAAAAAAGAAGGGAAAAAAAGATTTAAAAAAATACCAAGAAAACAACAGTGTGTGTCTGG ...:.:::.:x::.....:.....:......:.:..:...::.xxx..:...:x.xx.:.x.........x..:....... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 141948504 48266051 +3096 chr4 + 190214555 174039665 174039664 174039734 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 98006468 92208087 +3189 chr4 + 190214555 174041446 174041445 174041530 85 CATAATGTACTGTGTGT---------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATACATATGTAGGTGTATATATACATATGCACAC chr4 + 94230402 85834512 85834511 85834605 85834512 85834511 85834605 94 CAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACAC ..x......x.x..x..---------:.x.....x.................:.xx:.:x.x:....::..x..:x...:..::x......... 17M9I68M 61/85 71.8% 94/94230402 0.0% 9/85 10.6% 88206934 NA +3282 chr4 + 190214555 174041456 174041455 174041525 70 TGTGTGTGTGTGTGTGTGTGTG------TGTGTGTGTGTGTGTGTAGATACATATGTAGGTGTATATATACATATG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x................------...:x.::.:::.:....:......:.x..x.:::.:...:...:... 22M6I48M 51/70 72.9% 76/94230402 0.0% 6/70 8.6% 88206915 NA +3510 chr4 + 190214555 174041458 174041457 174041530 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATACATATGTAGGTGTATATATACATATGCACAC chr4 + 94230402 85834541 85834540 85834613 85834541 85834540 85834613 73 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACAC .....x.................:.xx:...:x.::..x...::..x:..x:...x...::...:..:..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 88206917 NA +3314 chr4 + 190214555 174041462 174041461 174041530 69 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATACATATGTAGGTGTATATATACATATGCACAC chr4 + 94230402 85834541 85834540 85834609 85834541 85834540 85834609 69 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATAC .....x.................:.xx:...:x:x...........::.::..:.x..:::.::..:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 88206921 NA +7191 chr4 + 190214555 174041713 174041712 174041934 222 CCATCTGGTGTGTTGACAGGTTTTAGATGACATCCTAGTGTTTCCTCAGCGCAGACCACCTCAGGAGTAGGAAGGCTACAGGACATTGTGAATGTTCTCCCTCAGCATATAAAAGAAACACCTGTACCAAATTAATTTGTGCTTATCCAGTGAG-AAGTTCACAGGGTCCCTCCGCCTCTTTTACCTATG-AAGGGTGGTCTATTGACTTAGCTGCTGTGCAAA chr4 + 94230402 45050508 45050507 45050727 45050508 45050507 45050727 220 CCAGCTGGTACTCTTACATGTTTTAGATTAGAGTCCAGAGAGTACTAAGACTGGACCACCACAGGAGAA--ACAGCTAGGGGACACTG--AATGTTCCCATGCACAGTGTTATACAAACAGCTGTATCAAATTAATCTAGGCTTATCCACTGTGAAAATTCACAGGGTTTAATGGCTTTTCTTACCTGTGAAAGGGTGGTCTAGTCATAGGACTTCTGTACAGA ...x.....::x:.x...x.........x.x.x:.:..x.xx.x..x..xx::.......x......x.--.x:....x:.....:..--.......:.x:x..xx:.:.x.x.x.....x.....:.........:.:x.........x..x.-..:..........::xx:x..:.:.:......:..-............x.x.:xx::..x....:..:. 69M2D17M2D64M1I35M1I33M 151/218 69.3% 220/94230402 0.0% 6/218 2.8% 128991205 61223350 +46031 chr4 + 190214555 174069605 174069604 174070451 847 TGTGGTTTAGAATTTCAGTAAT--CAAACCATAATAGCTTAAAAATACCAAGTTAGCTACCAAATCT-ATGCGCAG----------ACGAGATTAGGATTCAATAATGTGCTGACTAGTCTCATTCACTCTAAACATATTATTTTCAGATTTGACTTAAATAGCTAAGTTACTACTTTATCGCT----TTGTCCAAACCAATGCCTTCCCTCTCCTTCCTTCTACAGTACCATCTTTTTTCCTGCT-----CAATATTATCAAACCAAGCTACAAATCTAATTAAACTGTCTTGATGCCAAAATCTCTGCTCCTGGAGAAATGCATCATGCAGCACATCTAGGTAAGTGAATTAAAAAAGCATCCAGGCAGGTATCTGGTGAATGTCTCAGTTCATCCTTGCATAATAAACTATCTTCTCCTGCTCATTCATTTGTCAGTCACAGTAACTAAGGATTATTATTTGCTGAATGTACGTGACACCAGCAATTTGCAAAGTCTGTTGGCAAGAAAATCAGGTTAGCATGACAGAGTGAGAAATTAAGCAGAAGCCTGATGTAATTAGCTACAACAATCAGTGCTCTAATTTCTGATTTATTGTTTCCTGTTTTCCTGCTGCACTCCACTCTGTGTATACTGTATGTACTTCATATAGGTCAAACAATTGCCTTATCAGTCCTGGCAAAGCGAGAGGTCAGAGTTAACAATATTTATTTAAACATGCAGGATGCTTCCCTCTGCAATTAGGAAATAACTATTACTAATAGGTCCTTGGCACTATTTCCTCATTTATACAATTTTTGGGGAAAAAAGAAACAGAAGCAAGGAAGAATTGGGATTCATTTCTTACATATGCACAAAAGTTTATTT chr4 + 94230402 45053185 45053184 45054025 45053185 45053184 45054025 841 TATAGTTTGAAAGTGGAGTAATGCTAAAAGAGAGAATAATAAGGGTACCAACTTA--------ATCTGATGCACAACATGAAGACAATAACATCAAGATTAAATAACATGCTCATTAATCT-GCCTAATTTAGGCATATTTTTTTCAGAATTGATTTAAGTTTTCTAGTTACCACTTTATCTGTCTTGTTGTGAGAATCAATCTATGCTATTTTTCTCCTTTGCTAATAGCCTAATTTTTCTTTCTTTGTCCAGCATTATCAAACCATGCCACATATTCTATTAAGTTGTTGTGATGCCAAAA------CTCCTGGCAAAATGTATCATGCAGCATATCTAGGTAAGTGAATTATAAAAGCATCTGAGCAGGTATCTGGTGCATGTCACAGTTCATTCTTCCATAATAAACTGTGTTCTCCTTCTCATTCATTTGTCAATCATAGTAACTAAAGATTATTATTTGCTGTATGTATGGGACACCAGCAATTTGCAAAGTCTGTTGGCAAGAAAATCAGGTTAGAATGACAGAGTGAGAAATTAAGCAGAACTCTGATGTAATTAGCTACAACAATCAGTGCTCTAATTTCTGATTTATTGTTTCCTGTTTTCCTGCTGC-TTTCGGTCCATGCATACTGTATACGCTTCATATAGGTCAAACAATTGCCTTATCAGTCCTGGCAAACCAAGAGGTCAGAGTTAACAATATTTATTTGAACATGCAGGATGCTTCCCACTGCAATTAGGAAATAACTATTACTAATAGGTATTTGGTGCTATTTCCTCATTTATACAATTTT------GTAAAAAAACAG--GCGATAGGGAATTCAG----ATTTCAGACTTCTTCATAAATATTTTTTT .:.:....::..x.xx......--:...xx.x.:x.xxx...:::......x...--------....-....:..:----------.::.x..:.:....x.....::....x.:..:...-::::.x.:..::......x........x....:....:.xx::x......:........xx.----....xx:..:....x:x.x.:x.:.:::.....:xx:.:..x.x.xx......:.x..-----..::............x..:...x..::x.....::...:x...........------.......x:.....:...........:..................x.........:::..............x.....x........:...x...........:.x.......x...............:...:.........:...............x.....:.x.............................................x..........................x:...................................................................-:.:.:x..::..:.........:::.........................................x.:...........................:...................x................................x:....::........................------:x...:......--..:.x:::.....x:.----.....xx..x.x.x..:...x:...x... 22M2I31M8D4M1I8M10I35M1D62M4I58M5I52M6D309M1D181M6D12M2D16M4D29M 668/819 81.6% 841/94230402 0.0% 50/819 6.1% 129016420 61198135 +3041 chr4 + 190214555 174079759 174079758 174079818 60 GTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATAAAATCTCTCTCTGCCTTCATT chr4 + 94230402 33250994 33250993 33251053 33250994 33250993 33251053 60 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATT ....x.x.x.............:.:.:.....:.x....:.:.:.:.x.:..::..:... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 140828765 49385790 +22411 chr4 + 190214555 174087072 174087071 174087471 400 CTGCAAGACGTTATCACTAATTTGCT--GCCAGTAAATGTGT-GGTACAAACCAGAATTTCAGTTTGA--CCCTTGATTTTATAATTTAATACCAATATTACTTACATTATTAGTTTTACTGGTAAATCA-GGAGTAAGTTGTTGGAGTCCAGCTGTGACCCCAGGGCAAGAACTTTTTGCCTGCTGTCACCTTCTGACAGTTTAGGCTGTTAATTACCTCCATCAACTAGAACACAAGCACCTCTCTGTCTGCCAGCTGGCAGGCTGAGCTTCAGAAATTGGCAGCTTGGGAAGATCTAAAAAGCTGTAA-AGGGGGCTGCTATGTAAACAGTTTATTGTACAATATTTGATGACCACAGTAGGCCCGCATCAGTAATCAAAGGTAGGCTC--CGCTATTGGGCATTG chr4 + 94230402 45059850 45059849 45060255 45059850 45059849 45060255 406 CTTCAAAGTATTAATGATAATTTTCTTTGCCAGTTCATTTGGAGGTAGAAAATCTAACTCGGGCTCAGACCCCCTTGTTTTATAATTTAATACCGATATTACTTACATTATTAGTTTTACTGGTAAATCAAGGAGCAAGTTGCCGGAATCCAGCTGTGACCCCAGGGCAGGAACTTTCTGCCGGCTGTCACCTTCTGACAGTTCGGGCTGTTAATTACCTCCAACAGTTGGAGCACAAGCACCTCTCTGTCTGCCAGCTGGCAGCCTCAGCCTC--AAACTGGCAGCCTGAGAAGATTTAAAAC-CTGTAACAAAAGGCTGCTATGTAAACAGTTTATCGTAAAATACACAATGGCAGCAGTAGACCCACATCAGGAATCAAAGGTAGCCCCTGCGCTCGTGGGGACTG ..x...::::...x::x......x..--......xx..x..x-....x...x:xx..:.:x:.:.:::--...:.x:.................:...................................-....:......::...:.....................:.......:....x....................::..................x..::.:..:...............................x..x...:..--...:.......:..:......:.....x-......-.:::......................:...x....:x::...:.x:......:...:......x............x.:.--....xx....x.:.. 26M2I14M1I25M2I60M1I143M2D28M1D6M1I80M2I15M 323/397 81.4% 406/94230402 0.0% 12/397 3.0% 129027222 61187333 +3481 chr4 + 190214555 174098478 174098477 174098561 84 ACGTGGTGGTGGGCCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::......--.x.x....:.:...........::........x.xx.x...x:.........::.:..x.xx:..:..:.. 11M2D71M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 98065282 92149273 +3065 chr4 + 190214555 174098615 174098614 174098663 49 TCTCAAAAAAAAAAAGAAAAAAGAAAAAAAATTCAACAAGCAAAAACAA chr4 + 94230402 69388138 69388137 69388186 69388138 69388137 69388186 49 TCTCATTAAAAGAAAAAAGAAGGAAAAAAAATACAACAAACCAAAACAA .....xx....:...:..:..:..........x......:.x....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 104710477 85504078 +13882 chr4 + 190214555 174109919 174109918 174110461 543 ATTATGGACATAAATACAAACTTAGAGTTTCCAAAGTGGATACAATTTGTGCAGCTCAATGTTTGATATCTAGATATATTTGTAACATCTCAAAGCACTCTGCCCTGATTTTTTTAGACAGATTT-ACAGAACCCAGCTTAAGTTAACAGAAGTTGTAAATTATGTCTAAGTGGAATTTATAAACAAAAGTTAAAGTTGAGCATGCAAGGGAATATTGAAAAGTTTGCATAATGCTGTCAACATCTACAGTGCCAATG-----TTCATCCTTTCTTTTGTTA----TTAGCTGAACTTTTTTCTGTATACATGGATATATGTCTGAGTAAG----TACGTGTGTACAGATGTATGTTTTCAAATGAAACAAAGCTGTGCAGTTATTATCGCAGGGGCCGACTGGTCTCTAGGAGCACGTGCTTCCCCTGGCCTATTAAAATACAGTACCAACATTTCCCTCCTGTAGC--------ATTGTGAGTGTGATCTGACGTGAGCTTGCGTTTCTGGGAAAGCGCCTGGAGAATAGCAATTTAATTTAGAAACTGCTCAGCGTAAGTGT chr4 + 94230402 45065525 45065524 45066073 45065525 45065524 45066073 549 ATTATGAA-ATAAATGCAGATTTTCAAATGCAGATGTAAATTCCATGAGTG--------TGTTTGTTATCAAGGAGTATTTATGGCAGACCAAATTGTTCT---CTGATGTTTTTGGACAGATTTTACACTCAGCAGGTTGAGTTAACAGGAGTTGTGAATTATATCTAAAGGGCATTTATAAACAAAAGTCAAATTTATGCATGTAAGAGAATACTGAAAAGTTTGAATAACACTGTCAACATTTCCAATGCCAATACAGTCTTCTTCCTCCCTTCCAGTACTTTCTAGTAGGATTTTTTTTTTTG-AGATAGCTTACTCCCTTAGAGGACTCCCATATCTGCATTGATTTAAGCTGCCAAATAAAACAAAGCTGTGTGGCTGTTGTTCCAGAGGTT-ACCTGCATGTAGAAGTGTTTTTTTTTTTTTTCTGATACTCCTTGGGTATTTCTGTTTCTTTGATGCAGCTGTACAAAATTCAAAATAT--TTCAAGCCAAGCTCATATTTCTGACCAAAGGCCTGGAGAATTCCAATTTAGTTTAGAAGCAACATGGCTTTAGTGT ......:.-......:..:.:..xx.:x.x.x:.x..::..x.x..xx...--------......x....x..:x:.....:.::..xx:....x:::...---.....x.....:.........-...xxxxx...x..:.........:......:......:.....:x..x................:...x..:x.....:...:.....:...........x....::..........:.x..:.......:-----...x....::...:::x..----:...:x.:.:......:.x.:-.x..:.x.xxx.x:..x..x:::----:.::.x..:.:x...x..x.:.x:.....:.............::.:.:..:.:x...:..::-..:x.:x.x...:..:::x.x:..::::.xx.:x..xxxxx.xx:...::xx::....::.xx..:...--------...xx:.:.:.--.:::.xx::....::::......:xx..:x...........xx.......:.......:.x:.x::..x.x..... 8M1D42M8D42M3D21M1I132M5I19M4I21M1D23M4I63M1D69M8I11M2D76M 343/527 65.1% 549/94230402 0.0% 38/527 7.2% 129044394 61170161 +32103 chr4 + 190214555 174111220 174111219 174112021 802 AAAAAGTTGTTTAATTCTAAAATTGGACTGTTTCTTCTTAACTGGCCTATCAGCTTGCTTCTCTTCCTGCCTTTTTATTGAATCCATACTTTGTATTTCAGTGGCCCATTAAATTC---------------TTCCTGCTTTTTAGAGTTT----CTTTGAAAATATCTTGTGAATACTGCAGGAGAAAAAT-----TGCACTGAG----------------------TGTTACAAATCTCCTGTATTCTCTAAACAGGGACAGAAAT-----GTCT-----TTGGGTTTTGTTTGCTTTGTTTTGTTTTGTTTTTAAAGGAAGGATAGAACATTAACACATGACAACAGTGAGATTACACAGATAAATTTTTG-AGTCCTTTTATCTAGTAAACATTCTAATGACCTACTTCAAAGGCAGGCTGGGAAGAAGCCTCCCTGTCCTCCTG--CCAGAATGAGAG---GCGAAGCTCTTTACCACTCATATGGGAGATATGAGGAGACTTTGAATGGATCATTGCTTTTTATGAGTAGTAATGAGGTGAGAAGTATTCTAGTGTGTGGCACAGGCCTTCATTAAGAAGCGTGAAACAGAATGGCTTATGGTTAAAGGGGGTAATTTGTTCTAACATACTTGCTAAATTGTGTTGTAACCATGCCAGTTAACAGCACTATATTTTCCATAGGATTCCTGAGTGCATTTGTGTGCAATTATTCTTCCCATACAAAATTCAGGGATTTTTCCAATAGCTTGTGTTAACTAGTTGACAATGCTCACTCCTTCAGTGGAAAGTACACGGAGCCCCACCGTTAAAAAGGGGTGAAAGAATCCAGAGATGTTCTCATTCTCTTTCTAAAGCCAA chr4 + 94230402 45067964 45067963 45068790 45067964 45067963 45068790 827 AATAACTTGCTTAAATTCAGGCATG-ATTATTTTTTTTAAACTTGCTTATCGGACAGCATGTCTCATTTAATTTCTATTCAGCACATAGTTTATGTTTTACTGCCTTATTATATTTGAGTTCACTTGATATTTCTTTTTCTTCACCGTTTTTTCCTTTAGTTATATAGTTTTTATATATAAAAAGATAAATACATACACACAGAGCAAAATAATTGCTTATGAGAAATCTTAAAACTCTTTTGCTTTC-CTAAACAGCAATAAGAGTTTTACGTCTACAAGTGGGGAACTGCGGGT---------------------AGGGAGG-CAGGACACAGGCATACGACAGCAGTGAAGTTACACAGATAAATTTTTTTGGTTCTTTTATCTAGTAAACATCCTAATGATCAACATCAAAGGCTGG--AGAGAGAAGTCGTTTTTCTCTCTTGTGCCAGACTGAGAAAGAGTGGGCTCTTTTACATCTCATATGGGAGATATGAGGAGCCTTTGAATGGATCATTGCTTTTTATGAGTAGTAATGAGGTGAGAAGTATTCTAGTGTGTGGCACAGGCCTTCATTAA-AAGCGTGAAGCAGAATGGCTTATGGTTAAAAGGAGTAATTTGTTCTAACATACTTGCTAAATTGTGCTGTAACCATGCCAGGTCACTGGACTACATTTTCCATAGGATTCCCGAATGCATTTGTGTGCAATTACTCTGCCTGCAGAGAGTTCAGGGATTTTTCCAAAGGCTTGTGCTAACTAGTTGACAACACTCATTCCTCTACTGGAAACTTCTCTAAATGCTGTATTTTAAGAGGTGTGGAAGAGCCCTG----------GTTCTGTTCCTTGAGCCGA ..x..x...:....x.::.::xx..-.:.:...:..:.x....x..:....:.x:x..x.x...:x:.xxx...:....x.::x....x...:.:...:.x..x.::....x...:---------------...:.x:.:..:.xx....----....::xx....xx.x.xx...:xxx.::...x....-----::...x...----------------------.x...x..x...::..:x...-........x:.:.::.:.-----....-----.x...xx:..:xx.:---------------------...:...-:..:...:x::..:.:....:......::..................x-:..:..................:.......:.x..x........x..--:.::.....:.x:::.x::...:..--.....x.....:---.:.::x:::.....xx......................x.............................................................................-.........:....................:..:................................:..............x.x..x.x....:.................:..:..................:...x..:::.x.:.:.................x:.......:..............::....:....::.x......x.x.x.x:.::x.:::xx..x..:...x...:....::..x.----------:....x..:..x:....:. 25M1D90M15I19M4I37M5I9M22I21M1D18M5I4M5I15M21D7M1D48M1I47M2D25M2I12M3I116M1D253M10D19M 576/765 75.3% 827/94230402 0.0% 99/765 12.9% 129043256 61171299 +26642 chr4 + 190214555 174133610 174133609 174133981 372 CAGCTCGTATCTTTAAAGCTCTGGAATGGTGTAAATCATTACAGTGGTTTCACATTTTCATGGGATCAAGGAAACAACAGTAAGCTCATAAAACAGATACCACTAATTATGCAGAGAAGAAGCCATAAAGTCACTGGGAGAAGCATGTTTTATATTCATGAACACATCATTAAAAGTTTAAGACATGCTATCAAATTCTACATTTTAATACTATGCCCAACAGCATTAAACCCTCCCAACAAGAAAATCAGATTGTTTAATGATCCTTTTTGTGTCACACTGGTTTTATATGTCTGCAGTTGAAGCAGATGTGGAATTTG-TATTGCTGAACTTTTTTTTTAAATCATTGGATAGTTAAAAA-ATCATTTATCC chr4 + 94230402 45076859 45076858 45077226 45076859 45076858 45077226 368 CAGCTTGTATCTTTAAAACTCTGGAATGGTGTAAATTATTACAGTGGTTTCACATTTTCGTGGGATCAAGGCAACAACAGTAAGCTCATAAAACAGATACCACTAATTATGCAGAGGAGAAGTCATAAAGTCACTGGTGGAAGCATGTTTTATATTCATGAACACATCATTAAAATTTTAAGACGCGCTATCAAATTCTACGTTTTAATACTACACCCAACTGCATTAAACCCTCCCAACAAGAAAATCAGATTGTTTAATGATGGTGTT--TGTCACACAGGTTTTATATGTCTGCTGTTGAAGCAGATGTGAACTTTTCTGTTGCAGGACAGCTTTT----ATCACTGGACAATTAAAAATAATTTTTATCC .....:...........:..................:......................:...........x............................................:.....:..............x:....................................x........::...............:...........::......x..........................................xx.x..--........x................x...............:.x...x-.:....x.:..xx:....----....:....:.:.......-.x:x....... 270M2D48M1I18M4D19M1I11M 330/366 90.2% 368/94230402 0.0% 8/366 2.2% 129056751 61157804 +28193 chr4 + 190214555 174135880 174135879 174136458 579 AACAAACTCGGAAGAAAACATGGTTACTCATTTGCATCTCCAATTTAATAACGCCTATAATTGTCCAGTTACCAAA-GTTAGATCCAAATGCTTTTTCTCTGCCAAACGCAGCTGCTCG-----------------AGAAACCGAACA---CTGATTTGATTTTTCTGCAGGGTACATGTTCACTCGCGGCTCTCATGATGAATAAATAATGCC-ATGATGCCGAGGAGCTGCGGACCTTGCCCTTCTGTG-------------AAAAGGGCTGCATCTGCTTATTCTCAGACATTCACGATCCTAAAGGAATAAGACACCAGAGGCCTGTGAATAAGAGGGCCTTTTCAGACTTAACAAAGCCTTCGCTCCTGAATCCACCTTAACCAGTTGCGAGAAAAGAGCTTTTGGCACCAAGTCATCCTTCAGGAAAAGACTGATAATGATCACTAAAGACATACTCGGGGCTGCTGCCTCACTCACTTCAAAGGCTTTCTCTCTTAATCAACATTAAATCATCATTTCGCCAGGGATATAGGGACAGCTGTACACAATCTATTTATTTTAAAACAGATTACAACCAGGTCCCTCTGCCAAAATATAAACTTCTTAAT chr4 + 94230402 45081971 45081970 45082580 45081971 45081970 45082580 610 AACAAGCGAGAGAGGAGACTTGATTGTTT-TTTCTATATTTTATGTATCGATTCACAAATGTGTTTAGTTTTAAAAAGCTGACTCTAAAGGTTTTCTTTTTTGCTATAGCAGCTGTTCATATGAAAAGAAAAACAAACAAACCCAACAACTTTTCTTTGATTTTACTGCAGGATGCATTCTCAGTTACTCTTCTTGTGATGCATAAATAATGCCCACAGTGCAGTGTAGCAGTGGATCTTGCCCCTTTTTGTAGTTAACCAGAAAAAAATGCTGCATCTGCTTATTCTCAGACATTAATGCAGCTAAAGGAATAAGACATCAGAGGCCTGTGAATAAGAAGGTCTTTTTACATTTA-CAAAGCATTTGCTCCTGAATCCACCTCATCCAGAT-TGGGGAAAGTGCTTTTGGCACCAAGTCACCCTTCAGGGAAAGACTGATAATGATCACTAAAGACATACTACGGGCTCCTGCCTCTCTTACTTCAAAGACCTTCTCTCTTAATCAACATTAAATCATCATTTTGCCTTGGATATAGGGACAGCTGTACACAATCTATTTGTTTTAAAACAGATTAGGAAT-GGTTTTTCTGCCAGAGTATAAGCTGCATGAT .....:.xx.::..:.:..x..:..::.:-...x:..x.::x..x..x::.:x.x:.x.xx...::....x:x...-.:.::x..:...x.:...:.:.:.xx.x.xx.......:..:-----------------.x.....x....---:.xx.........x.......:.:...x:...x.::.xx:...::.....x............-.:::...x.x.x...x.:...:.......:.:.x..-------------....:x..........................x.:.xxx................:...................:..:.....:.x.:...-......x..:................:.x....x.-:.:.:....x..................:........:...............................xx.....x.......x..:.........:.:...............................:...xx...............................:...............x:.x:-...:::.......:.:.....:..x.x.:.. 29M1D46M1I42M17I12M3I63M1I36M13I92M1D35M1D189M1D31M 445/575 77.4% 610/94230402 0.0% 39/575 6.8% 129053909 61160646 +14315 chr4 + 190214555 174147733 174147732 174148185 453 GAGAAGAGGTTAA-CAGAGAGTGAGAATCCGAGTGTAAAGCGCATGGGCAGAATAT---AAAGAATTTCCAAACTGCCTTGAGCCGCTCCATATGTTCCTGGTGCTCAGTGGCAGCCCTCAATAGGAGCACCATATCTTTTAGTCCCATGT-----ATAAATTTGTTCTGTAAATTAAAATGTTGGCTTGTGCTCCCCTGGTGTTTAAGAAGGTGAGTGATGACCTTGGTGGGAGTACGTTTGTGTAGAAATGTGTCA-TAAAAGATGATGTCTTGGCCCAAGCAATGCAGGGTCCAGGTTTAGTCATTTGTTAAAAAAAAAAAAAAAAAGAGTTAAATATAACTAACACATCATGGGAG-TGAGGCTCTTGCCAAATGTAACTTTCTTTTGAAATCTGAGATGTCAGCTTTCGCCCTGTGCTTTTTAAAAAATATTTTTAGCATTT-TCTTTTACAGAGTTTCC chr4 + 94230402 45087688 45087687 45088133 45087688 45087687 45088133 446 GAGAAAGGGTTAAGCATGAATTAGGGATGCATGTG-AAAATATATGGGTGAAGTAGGAAAAAAAAATGCTATTCTAGCTTGAGTCACTCCATCTGTTCCCTTAATTCAGTGGCAGACCTTGACTGGACC-------CTGCTAGTCCCACACTTCACACAACTTCTCTCTGTAAATTAAGTTGTTGGCCTGTGTTGCCGAGG-GTTTAGGAAGGTGAGTGATGACCTTGGTTTGAGTATGTTTGTATAGAAACATGTCACTGCAGGATGATGTCTTTCCTCCAGGGACATAGGGCCCAATACTAACCATTTGTTAAGAAAATACCAA-----AGCTAAACATATCCAGCGTATGAAAGGATCCTACGCCCTTGCCAAGTGTAACTTTCACTC-ATCTTTGAAACATCAATGTGCAC----TGTATTTTAAAGGTTATTTTTAGCACTTGTCTTTTAAACTGTTTCC .....::......-..x::.x.::.:..x.:x...-...::::.....:::.:..x---...:..x.x.:.xx..:x......:.:......x......:xxx::..........x...::.:x...x.-------..x:........:::-----.:..x..:x:............:x.......:....:.x..xx..-.....:......................xx.....:......:......::.....-.:x.:...........xx.:.x..x:.:::....:...:xx:..::..........:....x.xx..-----..:....:...x.:.:.::..x.x:...x-:x.x..:........:..........x:.:-.xx.:...:.::...::x.x.:.----..:x.......::x...........:..-.......x.xx...... 13M1I21M1D20M3I70M7D15M5I45M1D56M1I67M5D29M1I30M1D23M4D28M1I17M 304/434 70.0% 446/94230402 0.0% 31/434 7.1% 129060045 61154510 +17456 chr4 + 190214555 174164775 174164774 174165206 432 CTGAAAAGAGA----------GCTCATCAATTCACCCTCCC-----------TGTAGGAGATAGTCAGTGTCTGATCCATTAAGTTATC---ATCCTAAAGCAGGACATTTATCATAATTTATTCTAGGATATTCTAAATTTGCTCTGTTGATTACCATTGTGTAAACAATGTCTTCTGCGAGCTTGGGTTGCATGATTGAGCGTTGGAACTGGCACTGATTTGAAGTTACCATTTGCTAAAGAGCTTC------------TGGTTGTTCTATCAGTACAAACTCCAGGGATGTCTAACAAGGGACATAGTGGTTATGAAA---AAAAAATGAGG-CTCTTCCTCTATGTAATGTTAATGGGCCACTTACTGAACTATATCTCTTTGGAGAGGCAAGTCTAAATGGTATGAGGTTAAAGAACATTAGAAAGTGGTTTGTGCATGTTCAACAACATGACTTTTCTCATTAAAA chr4 + 94230402 45098084 45098083 45098546 45098084 45098083 45098546 463 CTGAAAGGAAAAAAAATGTCTGTTCATCAATTCCCCCCCCCCCCCTTTTTTTTTTAAGTGATAACCACTGACTCTACCCGTATGTTATCTTTATCCTGAGGCAGCAAATTTATCATAATTTATTCTGGTATATTCTAAATTTACCATGTTGATTACCACTGTATAAACAACGTCTGGCATTTGCCTCAGCCAAGGAATTGAG-------GCTGGCGCTGATTTGGAGTAGAGATCTGTGGAGGAGCTTCAATTTACTGAAGTGGTTGTAGTATCAGAACAAACACCAGAGATAGATAGGAAAGGATACGGTGGTTTTAAAAGAAAAAAAATAAGGATTCTTCTCTTGTGTAATGCTAATGAGTCACTTACTGAAATATATCTGTTTGGAAAGGGAAGTCCAAATGACACAAGGTTAAAAAGCATTAGAAAGTG--TTCTGCAAGTACAGTGGGCTGGACTCTCTCATAGAAA ......:..:.----------.:..........x...:...-----------.x..:.x....::..x..x..xxx..xx..x......---.....:.:....x.x...................:.x.............:.:x............:...:.......:....xx:::xx..:.x:.:::x:x:......-------:.....:........:...x:xx..:..:x:.:.......------------.......xx......x......x....:...:xx..:x..:...:.::......x.:...---.......:...-:.....:::.:.......:.....:.:...........x.......x......:...x.....:.....::.::........:.:............--..x....x..x..::::xx..:x:.:......x:... 11M10I20M11I37M3I110M7D40M12I60M3I11M1I97M2D37M 313/423 74.0% 463/94230402 0.0% 49/423 11.6% 129066691 61147864 +3350 chr4 + 190214555 174165829 174165828 174165901 73 TGCACCTGTAATCCCAGCTACCCAGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGATGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:........:::::........x.xx.x...x.x........::.:..x.xx:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 98132624 92081931 +3969 chr4 + 190214555 174180918 174180917 174181000 83 CGTAGTGGCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....::....--......:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 98147721 92066834 +39545 chr4 + 190214555 174198744 174198743 174199305 562 CAAATTAAAATCTCAACTTCAGTCATGACAACAAAAACATATTTCTCTTTCAATTTAATTTCCATGAGAAACTATTCTAAATTAAAACCTTCCAGTGTAGTGT-CTTTCATTTTTTGCATTTTTACTACCTAGGGATCAAACAGTTTGACACAGCAAAAATTCTGGTGAGTTAGGAAGAAATGCTGATTGGTTTGTTGGCTGGTGGCCGGGGGAATGTTATGACCGAGTAATTACGTGTTCTGGACAGATGCATTAACCAGGCTTGGGGCTGGAGCCACTGGATATTATTTTAGTCATAAGGCTAGAGGAACTGAATCATTTTCAAAGCATTGGCTGGCTGACATTGCCTTACTGATGCCTGTTCCAATGACTCTTTGGCAGTAACTTCCAACGCTGCACTTATGACATGGTAAACAAAAACTACATTAAAGGTTTGCTTTTTAATCATGAAGGAGTTCAACATTTCCACTAAGC-TCTCTTGCTATTTATCAAGTCACATTGAAGGCTATTGCAGATTTTCACAGTCCTG-TCTTCTGATAGAAGAACTGTAGCAATGTAGCAA chr4 + 94230402 45109751 45109750 45110314 45109751 45109750 45110314 564 CAGAATAAAAGTTTAACTTTAGCAAAGTCAACAAAAACATGCTTCTTTTCACAATTAATTTCCATGAGAAACTACATTAAATTAAAACCTTTCAGTGCAACATTCTTCCATTTTTTGCATTTTTACTACCTAGAGATCAAACAGTTTGACACAGCAAAAATTCTCGTGAGTTAGAAAGAAATGCTGATTGGTTTGTTGGCTGGTGGCCGGGGGAATGTTATGACTGAGTAATTATGTGTTCTGGACAGATGTATTAACCAGGCTTCGGGCTGGAGCCACTGGATATTATTTTAGTCATAAGACTAGAGGAACTGAATCATTTTCAAAGAGCTGGCTGGCTGACACTGCTCTAGTGATGCCTGTTCCAATGATTATTTGGCAACAACTTCCAACGCTGCACTTATGACACAGTAAACAAAAACTACATTAAAGGTTTGTTTTTTAATCATAAAGAAGTTGAACATTTCCACTGAGCTTTTTTTGCTATTTATCAAGAAGCACTGAATGCTATTGTAAAGCTTC-CATCCTTGTTCCTCTCACCAAAGAACTGGAGCTGTTTAGCAA ..:.x.....x:.:.....:..:x.x.x............::....:..:xx.x....................:x:..............:.....:.:::.-...:.........................:..............................x.........:.................................................:.........:................:.............x...................................:..........................x::.............:...::..x..................:.x.......::.........................::...........................:...........:...:....x............:...-.:.:...............xx:..:....x.......:.:.x:...-..x:.:..-..:...x.:x:........x...x:.x...... 103M1I371M1I46M1D8M1I33M 486/561 86.6% 564/94230402 0.0% 4/561 0.7% 129088993 61125562 +25136 chr4 + 190214555 174203422 174203421 174203939 518 GATACTATATAATATTTATGCATGCATGACAACAAAATATGTTTCAATAAAAATATATTTGAACTAGCAAAGCAAAATTGCTTTAAGCTTTTGATCTATCTCATAGCTCACATCTCTGAAAGTCTTTTCCTTTCAGC----AGTTACATTCAAAAAGTCAAAGATATACAGCTGACGATTCAAGCTGAATGACACCACGATAAACTATGGTTTCTCCTACAGATAAAATACATCATAAATCGGTGCAACACTTACCTCATTTTAAATATTACTGTCTCCTTTTATCAGGTAACACTATATGACCTCCTTTTGCCTCCCTTCTTCCCATATTTTACATGAGATTTTAATTCTATACAATGATCACAACCAGAA-TTTATTTAATTAAAATAGGATATATGGCTTTAAAGGGTTAGGTTATCTGAC-AAACAGATTTAATTTTAAAAAATAATAATGAGGACAGACTGACTTCTAATGCCCCGCAAAATGTGGCAATAACAGAATTATAT----TTATTTTTAAATTGCA chr4 + 94230402 45114256 45114255 45114764 45114256 45114255 45114764 509 gatatt-tataatatttatatatatatGACAACAAAA-ATATTTCAATATAAAAGT----GAATTATCCCAGGAAAAAAATGCCAAGCTTTTGATCTG-CTTATACATCACATCACTGCAAACCTTTTCCTTTCAACCTAGAGTAACATTCGAAAGCAGAAAGATATACAGCTGACGTTTCAAACTAAACGACAGTACGATAAACTAGGGTTTCTCCAGAAGATAAAATACATCATAAATCGGTGTAACACTTACCTCATTTTAAATATTACTGTCTCCTTTTATCAGGTAACACTATATAACCTCCCCTTACCTCTTTTCTTCCCATATTTTATTTGGTATATTAATTCTGAACAATGATCACAACCAGaattttttttaattaaaatcaaatatatGGCTTTAGAGGCTTAGGTTATCTGATGGAACTATTTTAATT----AAAATAA----GATACCAGCT---CTCTTGATTCATTGATGAAT-TGATAATAATTGAAACGTACAGTGTTAATTTTAATCTGCA ....:.-............::..::............-..:........x...x:.----...:..x.xx..x....xx::x::.............:-..:...xx.......x...x..::............:.----...x......:...:xxx..................x.....:..:..:....x:...........x.........x:x.........................:......................................................:......::..:....::................:x..:x..x........:x...................-...x............x::.............:...x.............:-:...x:x.......----.......----..x:x...x:---..::.:..x.x::.xx:...-..::.....:x...x::..:----...x......x:.... 6M1D30M1D18M4D38M1D38M4I231M1I51M1I14M4D7M4D10M3D20M1D20M4I16M 402/499 80.6% 509/94230402 0.0% 29/499 5.8% 129089166 61125389 +3180 chr4 + 190214555 174205851 174205850 174205918 68 GCCCGCCAGCACACCCAGCTAATCTTTGTATTTTTTTTTTTTTTTTTTTTCATAGAAATGGGGTTTCA chr4 + 94230402 58164882 58164881 58164949 58164882 58164881 58164949 68 GCCTGCGAGTAAACACACATTGTGTTTGTTCTTTTTTTTTTTTTTTTCTTTAGAGGAATGGAATTTTA ...:..x..:.x..x..xx.x:.x.....x:................:..:.x..:.....::...:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 116040969 74173586 +19127 chr4 + 190214555 174208928 174208927 174209506 579 AAGTGAGATAGTTGCTAAGACACTGTTAAGGTAGGTTGGAAGCACTTAGTTTTGATAGGCATGATATATAGCTAGGGAAGCAAGTGTATGCAAATAATTATGCTGTCTTTGAAAGAGTGGCTTATTTAGATGTAGCATAGCCAATGAGACTGTGGTAGTACTTGTGAAACTTACAGGAAGTAATTAAAGACGCACAGATTCTCT-TCTTTTACTGGCTGTTTCTGCATTACATAGAGATTATGAAGAGAGACAAGAAGAATGACAGAGAAGCCTGAACAGCCCGTCACATTTTCAACTAAGAAAATTGTTTTTTTC---CATAGGCAAACTTTCTAGTTAACAAACA-------------CTTGT--TGTTTTTATTTTA-TTCTCTATTACTTGCAAGTT------TGGGAAAA------------------ATTCTGATTTCTACATT--TTAACAAAGATACAGACATGTTTATTCTCCAAAGGGTTTGTTCTCTATGTCACCAGCATTTTGCAATCCTCTTCATCCTC--------------------AGGTCCTCTGGTTGGTTGCCATCTGGCAGTTTACCTTTGATTTTATGAATAAGGTCCCCAATTGTTTTTGCAGCTGTTATCAGTGCAGCCTGA chr4 + 94230402 45118438 45118437 45119062 45118438 45118437 45119062 625 AAGTGAAAT----GTTAAAATGCCGCAATGGTATGTTGGAAACATTTAATTTTGATAGGCATGATGTATAGCTAGGGAAGTAAGCGCGCTCAAATAATTATGCTGTCTTTGAAAGACTAGGCAATTTAAAAGTAGATTATCCAATGAGGCTGAAGTAGTAGTTATCAAATTTTCAGGAAGTAATTAAACAAGCAGAGGTTCTCTCTTTTTTACTGGCCGTTTCTGGGTTGCATAGGGGTTATGAAGAGAGACAAGAAAAATGACAGAGCAGGCTAAACAACCCATCAAACTCTCCTTGAAGAAAGCTTTTTATTTCCTTCATGG-----CTTTCTGACTTACAAATAAGCGAGGTGAGATTTTGCAATGTTTTTGCTACAGGTCTCTGATA---AAAAGTTGCCCTGTGGAAAAACAGCGGCCAGTGTGGattattattatttttttaataCCTCACAATG----AAATCTGCATTGCCCCCACAAGACCAGTTCCCTGCTT----AGGGCTTTTTTTTCTTCTTCTTCTCCTCCCCGCCCCCCCAGCGCCGGGCTCTGCCGGTTGGTTGCCATCTGGCACATGGCCTTTCCTTTCCAAACGTCTGTCCGCAATCCTTTCCCCAGCTGCTGTCAGCACTGCCTGA ......:..----.:...:.::.:.:x.x....x.......:..:...:................:..............:...:.:::x..........................x.:.x:x.....:.x....xx..x........:...x:......x..:.x...:..x...............x.x...x..:......-.:..........:.......x:..:.....:.:...................:..........x..x..:....:...:...x.:.:..xx:x......::.x...x....---...:.-----......:::.x.....:.-------------:...:--.......::.x:.-x.....:x..---:x.....------...:....------------------...x.x....:.x:.x.--:.x....x.----.:.:x..:x.xx:.:...x.:.:::x....:..::x.----..x::...x:xx..:.....x..::.--------------------:.x..:x.:...................xx.x:.....xx...:xx:.xxxxx....x....:x...::x......:.:....::.x...... 9M4D191M1I111M3I5M5D18M13I5M2I13M1I10M3D7M6I8M18I17M2I9M4D37M4D26M20I93M 405/559 72.5% 625/94230402 0.0% 86/559 15.4% 129090490 61124065 +3114 chr4 + 190214555 174224785 174224784 174224911 127 CCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTTCCCCTCTCCTCCCCTCCCCTCTCCTCCCCTCTCCTCCCCTCTCCTCCCCTCTCCTCCCCTCCCCTCCCCTCTCCTCT chr4 + 94230402 1076419 1076418 1076545 1076419 1076418 1076545 127 CCTTTGCATTTTCCTGCACTCTCCACCTCTTTTCCAGCCTCTACACTTTTTCTGGTATCCCCACCCTTTTTTATTCCCCTCCCCGCCCCCCTCCGGTCTTTTCAACCGCTGCTTTTCCTCATCCTCT ..::.x.x:.::...x.x...:..x..:..:::.:xx....:x.x.::..:.:xx:x:.:..x.:.:::.:.x:.......:..x....:....xx:.:.:..xx..x..x.::.:..::x...... 127M 70/127 55.1% 127/94230402 0.0% 0/127 0.0% 173148366 17066189 +3048 chr4 + 190214555 174224928 174224927 174224988 61 CTCTCCCCTCCTCTCTCCTCTTTTCTCCCCTCCCCTCCCCTCTTCTCCCCTCCCCTCCCCT chr4 + 94230402 7218317 7218316 7218377 7218317 7218316 7218377 61 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCTTCCCT ..:.::::.::...:.:x..:....:.........:...::..:.:...x.:.:..:.... 61M 40/61 65.6% 61/94230402 0.0% 0/61 0.0% 167006611 23207944 +15433 chr4 + 190214555 174230734 174230733 174231030 297 TTCTGATTTAGACTTTTAAACTGTCAATACCAGAGAGACAACGCCACTGATGGGGACCTGGCACTAGTCCTTCCAGTTAATTTTTTCCTTGGAGAATGGTTTTGGGCGACAGAGTGGCGTCCGG-CTTCCCAGGTTGTTGCACTGACAAACTGCAGTGGTGGCAAAGTCAAGGAGTCTGACAAAATCTCATTAATCATTTTAAATTAAATCCAACCTTCCTGTCCAACCATGCCAGGAAGAAAGCCTTTATTTTTTTTTTAACAAATAAAAATTTCCTCAGTAAAGATTTGATATCTT chr4 + 94230402 45132178 45132177 45132463 45132178 45132177 45132463 286 TCCCGACTCAGA--GTTAAGCTGTCAACAGCTGAAAGACAGTCCCATTGACATGTACCTGGCACTAGTTACTCAGGTTTATTTTTTCCT-GGAAAGCTGTTTTGGGCGACAGAGTGGCGTCCGGGTTTCCCAAGTTGTTGTGCTGACAAACTGCAGTGGTGGTAAAGGCAGGGAGTCTGACAAAATCTCATTAATCATTTTAAATTAAATCCAACATTCCTCTCCTACACTGCCAAGAAGAAAGC--TAACTTTT------ACAAATGAATACCCTCT-ATGAAAGAACCGATATCCT .:.:..:.:...--x....:.......:.x.x..:.....::x...:...::x.x.............:x:..x:...x..........-...:.::x..........................-:......:.......::....................:....x..:............................................x.....x...x..xx.....:.........--.x.:....------......:..x.::::..-.xx.....x::......:. 12M2D75M1D34M1I120M2D8M6D17M1D19M 230/285 80.7% 286/94230402 0.0% 13/285 4.6% 129098556 61115999 +30812 chr4 + 190214555 174236972 174236971 174237654 683 GAGAGAAAAGGAAAAACTTTAGTTAAAAT-CTTTACAATAAAATAATTATGACTATAAATCTCTTTAGTTAAATATGTACACATTACATGGTATTTGTATAAAGAATGGAAATGGATAAAGTTTTTCAGGCAAATCTAATGCACAAATACACCATCTT------TTAGAGTATAATGTCAGTTT-ATCATTCGTTAACAGCTGTGTTAGAC-AGTGGCTCTGCTTTGTGCAAAACGTGATAAACAAAATTAGGAAAAAT---TCTGCAAAATTATTTAGTTCCCCAAGGAAATTACTAAAATAGAAAA--TGGCAAAAGAAAAAAAGGTTGCACACTGAAGCTTGATTGTATACTCAGGCTACAATGACCAGCACTGATGTAACCCCCATATCTGCTAAGT--------CCTTGGGTAGCTTTAGTCT----GAAGTAAAAACTGAAGTCCTAGCAA-TTGTGCTTTTTATGCAGCCACATGGCCAATAAGGTAGATATTGTCATAAAGATGCCCTACAAAATCTTCACTAATATTTTGAGCAGCGCGACGGGTATTTCGAATAAATTCCCTTTTTGACATTTTATTCTTCACATGAGGGCTAGTGAGGTCAATGGAAAGTAGAATCAAAGAGTAGCACAGTACATAGACAGCATCTGG---AAAGAAAAAGAAACAGTTCAAATTATTAGTTGGTTTACAAAATATGATTCC chr4 + 94230402 45136925 45136924 45137613 45136925 45136924 45137613 689 GAGAGAGAAGGAGaaattttagttaaaatattttacaataaaataattatgattataaatCTCTTTAGTTAAATATATACACATTACACAGTATCT-TAAAAAGAATG-AACTAAATAAAGTTT--CAAGCAGATCTAATACACAAATCCACCACTTTGTCAGCTTAGACTGTAATGTCAGTTTTAACATTTGTAATTAGTTGTGTCAGACTAACAGCACTATTTTGTGCAAAA-----TTAAAAAAATTATGAAAAACAAATCT-CCAAATCCTTCCATTCCCACAGTAAAT-----AGATAGAAAAGGTAGTTTACACATACACACTTACACAC-AAACTTTGATTGCATACAGAGGTTAGAATGACCAGCACTAAAATAACCCCCATCTCTACAAAATAATCTATTTCTTGAAACAATGTAGTTTTTGAAAATTACAAATTG---TGCTAGCAAATTGTGCGTTT-AGGCAGCCACGTGGCCAATAAGGTAGATGTTGTCATAAAGGTGCCCTACAAAATCTTCGCTAATATTCTGTGCAGCTCGTCGTGTATTTCGGATGAATTCTCTCTTTGACATTTTGTTCTTCACGTGAGGGCTGGTTAGATCAATGGAAAGAAGAATCAAAGAGTAACACAGTACATACACTGCATCTAGACAAAAGAGAATAAAATAAAATAAATTAT--GATCGTT--AAAAATATTGTTCC ......:.....:...:............-:.....................:.......................:...........::....:.-..x........-..x.::.........--..:...:.......:.......x.....::..------.....x.:............-.x....:..x.x:..:.....:....-.:::..x..::...........-----.x..x.......x......:---...-.x....:x..:x:.....xx..x....-----.:........--.:.:xx.x:x.x.x.x:x..:.....-:..x:.......:....xx...:..x.............:.x:..........x...:.x..:.--------:....::xx:x.x....:.----:..x..x...:..---.x.......-......x...-.x........:.................:...........:.................:........:..x.....x..x..x........:..:.....:..:...........:........:........:..x..:...........x..............:...........x..x......:.---.....:..x:...:.:xx:.......--.x.x...--x.......x:.... 29M1I66M1D11M1D15M2D32M6I20M1I26M1I22M5D20M3I3M1D27M5D10M2I26M1D64M8I19M4I13M3D9M1I10M1D190M3I26M2D7M2D14M 531/659 80.6% 689/94230402 0.0% 54/659 8.2% 129100047 61114508 +15966 chr4 + 190214555 174238989 174238988 174239204 216 CTTACCAGGACTAAGGCCAAGTTCTCGCATTAAATCAGGGTTGCAAGCACAGAATCTATGTGAGAACTTTGTTATAAGAGTTTCAAGATACTCTCCACGCTCTTCAGGGGCATGGATATGACGAAAAAATTCTCTCAGTGCATTTGGCAAGAACTGATTTCTAAAATTATGCAATGTTACAAGGTCATCCAAGACATCTCTCCTACAGAAAGAAAA chr4 + 94230402 45138322 45138321 45138537 45138322 45138321 45138537 216 CTTACCAGGGCTAAGGCCAAGCTCTCTCATCAAATCAGGGTTACAAGCACAGAATCTGTGAGAGAACTTCGTTATGAGAGTCTCAAGGTACTCCCCGCGCTCCTCGGGGGCATGAATATGTCTGAAGAACTCTCTCAGTGCATTTGGCAAGAACTGATTTCTGAAGTTGTGCAGTGTCACAAGGTCATCCAAAACATCTCGCCTAGTGGAAGAAAA .........:...........:....x...:...........:..............:..x........:.....:.....:.....:.....:..:.....:..:........:.....x.x:..:..:................................:..:..:....:...:..............:.......x....xx.:....... 216M 185/216 85.6% 216/94230402 0.0% 0/216 0.0% 129100667 61113888 +12793 chr4 + 190214555 174241096 174241095 174241440 345 TTACCTTTCATCAAGATAGATTCTCAGTTTTTTCCAATTTAGTGTTCTTGTACAGAAGATAAACTTTGCTATTTCCTTTGGCGAATCATCCAGGATACCCTTGGACATAAAGTAGTTCACTCCCTAAGGCAGAAAGACAAGTCTACATAAATAAAATTGCTCTTTAT-TTAT------------GCATT----TTAACAAT-TAAGCAA--TAGCACAACAGTAGCTATAAATTCTTTCCAGC---ATTAATAGACTTTTTGT------AGCTTTATCATGCAAAATACAAGCTAGAACTTGAACT-----------GAAACTA--TTGT--TTGTGGTTGATAGTTTACATGCAATGAAAAGCAGGAAATTCAAAGTTAAGACTGTTA chr4 + 94230402 45140123 45140122 45140509 45140123 45140122 45140509 387 TTACCTTTCATCAAGATAGATTCTCAGCTTCTTCCAATTTAGTGTTCTTGTGCAAAAGATAAACTTAGCTATTTCCTTTGGCGAATCATCTAGTATGCCCTTGGACATAAAGTAGTTGACTCCCTGAGATA-AAAGACATGTATGCATAAATATGTTTCATCTTCATATTATGGTGAGGAATAAGCACTGTACTTAGCAACATAAGAAAATTATTCCACTAATTACTTGCATTTTATTCTAGCAGAATAATTTCACTTCCTCTCAATCACATTTCAGCATGCACAATACAATCTAAAATTACAAATCAAATGCAAAGGAACCTAGTTTGTTGTTATGGTTGAGATTTTACATATACTT-AGAGTAGGACATTTAAAATTGTGAATCTCA ...........................:..:....................:..:...........x.......................:..x..:....................x.......:..::.-.......x..x.:........x:x..xx....:..-....------------...:.----...:...:-....x..--..x:x..x:.:.x:..xxx.x..:x...:...---..x.x.xx....::.x.------x::..:.x......x.......x...:..:.xx..x.-----------...x...--....--..:.......x.x.......::.x.x-.:..:....x...:...:..:x..x.x.:. 131M1D35M1I4M12I5M4I8M1I7M2I32M3I17M6I37M11I7M2I4M2I26M1D30M 266/343 77.6% 387/94230402 0.0% 46/343 13.4% 129100973 61113582 +3011 chr4 + 190214555 174252652 174252651 174252711 60 TGCACACACACACACACACACACACGCACAGACAATACTACCTCTTTGTGTCTCTTTTTT chr4 + 94230402 58707026 58707025 58707085 58707026 58707025 58707085 60 TGTACATGTACACACACACACATATGCACACACTATAGTTATTCTTGCTGTCTTCTTTTT ..:...:::.............:.:.....x..x...x.xx:....xx.....::..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 115545626 74668929 +3066 chr4 + 190214555 174252841 174252840 174252913 73 TGCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGCACAAGAATTACCTGAGCCCGGGAGGTGGTGATTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x....:.:.........:x.:........x.x::x...x:..:...:...:.:..x.xxx.::..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 98219636 91994919 +15984 chr4 + 190214555 174255890 174255889 174256301 412 TGGTTTTCAGCACATTCCTTTACTAGAATGTGGCCACCTGCCACAAAGTACACAAGCTCATGCACAAGATCAAGACGTTACAT-ACAGCTGAGATCACAATGTCATGCATAGTACAACAGCGTGCCAGATTATCGTACCACAAACTGTGCAGATGTTCTCCCCCACCCCATGAGCCACTGCC--------AGCAGCTGCTGTGGAGCTTGGTTACCCATATCCGTGACATGAACGGTGTCCTTTGGAGAATCTTGTTCCCTGTGGCTGTAAGTATTCTTATTTTTATAATATTTTAATGATGTTTGCTATCAAAATGTTAAGTACAAT---ACTGGAAATTATGAAAAAGTAGACTTTTTACAATACTAAGCAATTATATACATCTTATCTCAG-GTACTTGCAAAA----------AGCATCACATATTTAAAC chr4 + 94230402 45144641 45144640 45145066 45144641 45144640 45145066 426 TGATTATGCACATCTTTTTTCAGCAGAATGTGAGCACCTGGTATGAATTATGCAAGCTCATGCACATAGTCAGTACGTTAAATTACAGCAGATACCACAACACCATGCACACAACAATGGCTAACCAAAGAATCCTACCACAAAGCGTGTAGATGCTCTTCCCTACCCCGTGAGCCACCGCTAGCTCTGGAGCTGCTGCTGTGGAGCCTGGTTACCCATTTTCATGACATGGGCGCTGTCCTTTGGAGAATCTTGCT-CCTGTGGCTGTAAGTATTCCTATTTTTATAGTA-TTTGATCAGGTCTGTTATC-AAATGTAAAGCAGAGTTTGGCAGGAAATTCCAAGAC-----ACAATTTGTAATAATGGAATGTCATATAT-TCCAGTCACAGTGTCCTTGTAATAATAATTTGCCAACATCACAGTTGCAAAC ..:..x.xx:..:x..::..:.x:........:x......x:.::..x..::..............x::...:x......x..-.....x..x.:.....:::......:.xx....::..xx:...:.xx...x.........x:...:.....:...:...:.....:........:..:--------...x.............:...........x.:.:.......::..x...................:.-...................:..........:..-...:..x.x..:..:....-......x...:.x.:.---:.x.......x::.:.x-----..xx...::....x.:::xx:.:.....:-..:x:..x...-..x....:..x.----------.:.......xx.x:.... 83M1I98M8I67M1D33M1D19M1D16M3I17M5D29M1D11M1I12M10I18M 297/403 73.7% 426/94230402 0.0% 32/403 7.9% 129111249 61103306 +12575 chr4 + 190214555 174259690 174259689 174259991 302 TTCACTAACCTCATCTGGGTTGGCATTAAAGGTGAGGCTGCCTTCATCCAGCTGCATATACAATTTTCTAAAAGAAAATCCTAAAGGTGGGTTCTTATTGTATATGGAACAGTGACCCCAAGTGGATTTGCACAACCTATAAAATCAGAGAAAATGAGACAA-----GAAAACAT------TACTACATTTAATTTCCTAAGTTAAATA----------TGCA--------TATACATGCAAAAATAGTAACATGAAATAAGATTGAATTTTATAGTTCTAAAGTTTAAAATTTTTAAGTTTGTACTTGTTTTCTATTTGTTTACTAGAGT chr4 + 94230402 45146704 45146703 45147012 45146704 45146703 45147012 309 TTCACTTACCTCATCAGGGTTGGCATTAAAGGTGAGACTGCCCTCATCTAGCTGCATATACAATTTTCTAAAAGAAAATCCTAGAGGTGGATTCTTATTGTATATAGAACAGTGACCCCAAGTGGATTTGCACAACCTATGAAA----ATAGAATTAGTCTATTGTCAAAAACCTTTTCTGTATTTCATGTATTTACAAAAGCAAAACATAATCAACGCTGCAAAACCAAGTACACAGACAATAAGAAAACTTAAGAATAAGATTGACTGTAACACTT-----------AATTCTTAAG------CCTTCTGTATGTTTGTTT-CTAAAGT ......x........x....................:.....:.....:..................................:......:..............:..................................:...----.x.:...x..x.x.-----:.....x.------..:.x...x..x..x.xx...:x...:.----------....--------..:...x:...x..x.:x.x:xx::...........x.x.x.:.x..-----------....:.....------.:.x:.x.x.:.......-...:... 144M4D14M5I8M6I28M10I4M8I47M11D10M6D18M1D7M 228/280 81.4% 309/94230402 0.0% 51/280 18.2% 129112986 61101569 +23489 chr4 + 190214555 174262759 174262758 174263136 378 CTTACCCTTGCCAGAGAAGTTCATCATTCGCAAGGTCCTGCCAAACACATGAAGCCAAGCAAAGGTCAGTTGCATTCAGGTAGGACAAGATGGTAAAGCTTAGCTCAGGAGGCAACATTTCCAAATTAATGAATCCTTCCTGTTCTTTCGATTTCCTTGCCTTCAAAAGATGATATATGTCAATGCCTCCTTGGACTTGTTTACGATGATTGGTGTTAGAAATGTTGCTCGCAGCCATTCTCCTGCTCTGCTCTCTGGTGAGGTAGCCTTGCTCACTGTAGCCTTCTTGTTGCAGCTGCTGGTTTCTGACCACTCTCCACAACCCTTGACCCATCTGCAAGCCTG------GGAAAAAGCCA----GAATGTAATAAGGGTGACATTT chr4 + 94230402 45149094 45149093 45149481 45149094 45149093 45149481 388 CTTACCCTTGCCAGAGAAGCTCATCGTTAGCAAGATCTTGCCAAACACATGAGGCTAGACAGAGATCAGTTGCATTCAGGTATGACAAAATGGTAAAACTAAGCTCTGGTGGCAGCATTTCCAAGTTAATGAATCCTTCCTGTTCTTTAGATTTTCTTGTCTTCAGTAAGTGGTAGATGTCAATGCCTCCTTGGGCTTGTTTCCGGTGGCTTGTATTGGAGACATTGTTAGCAGCTATTCTCCTACCATGCTCTCTGGTAAGATAGCCTTGTCCACTGAATCCTTGGTGTTGCAGTTGCTGGTTCCTAGCAACCCTCCAGAGTCCCTGACCCATCTGTGAGCCTGCTGGAAATAAAAAGCCAAATTAAATGTTGTCATAGTCACATTT ...................:.....:..x.....:..:..............:..:.::..:..:.................x.....:........:..x.....x..x....:.........:.......................x.....:....:.....:x.::..:..x..................:.......x..:..::.x..:..:..:.::...:.x.....:........:.:x...........:..:........::.....x.x....xx........:........:..::.x..:.....x.::..:...........::......------:x.........----:.....x:.x.x:..x...... 345M6I11M4I22M 304/378 80.4% 388/94230402 0.0% 10/378 2.6% 129113665 61100890 +3051 chr4 + 190214555 174291742 174291741 174291799 58 TGAGGAAGTTTTCATGTTTTCTTTATTCTTTTATCTTTTTCTTTTCTTTTTTTTTTTT chr4 + 94230402 37159727 37159726 37159784 37159727 37159726 37159784 58 TGAGGCTGTCTTCATGTTTTGTTTCTTTCTTTCTCTTTTCGATTTCTTTTTTTACTTT .....xx..:..........x...x..::...x......:xx...........x:... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 137132015 53082540 +9893 chr4 + 190214555 174302007 174302006 174302242 236 TATTAAAAATATTTTTCTTTTTTTCCTAACAGTTTGATAAAGGGAGACCCAGCAGCATCTTTGCCCATCATCAGCTATTCTTTTACCTCATACTCACCTTATGTAACAGAACTTATAATGGAATCCAATGTAGAGCTCATAGCAAAAAATGACTTGCGCTTTATAGATGCTGTCTATAAGGTAT-----TTTGAGTTTATCAAACAATAACTATTAGTTATTGAATGATTTTTAAAAATTA chr4 + 94230402 45156346 45156345 45156582 45156346 45156345 45156582 237 TATGTAAAGTATTTCT----GTTTCTTAATAGGTTAGTGAAGGGTGATCCAGCTGCGTTTTTACCCATTATTAGCTATTCCTTTACATCTTTCTCAACTTACATAGCAGAACTTCTGGTGAAATGTGATGTGGAACTTACAGCAAAGAGTGACTTGCGCTTTATTGAAGCTATTTATAAGGTATCTGTCTTCACATTCTTTAAAAAAGAGGCATAATTTTGTGTATGACCTCATAAAAGTA ...xx...:.....:.----x....:...:..x..::.:.....x..:.....x..:.:...:.....:..:........:.....x..x.x....x....::..:........x.::..:...x::....:..:..:.:......:.:...............x..x...:.:..........-----..::x:..:x.:...x..x.:x:..x.x..xx..x....::.:xx....x.. 16M4D164M5I52M 165/232 71.1% 237/94230402 0.0% 9/232 3.9% 129145661 61068894 +10020 chr4 + 190214555 174303688 174303687 174303889 202 CTGTTTCCTCTGCAGCTTCTTCGTGATCAATTTAATTATAAACCAATTTTGACAAAAAAGCAGTTTATCCAATGTGGGTTTGCAGAATGGAAAATCCAAATTGTTTGTGATATTTTGAATTGTGTGATGAAAAAGCACAAGGAATTAAGCAGTCTTCAGAAGGTAATTTTATGAATAGATA--TTAATGCTGATGTATGCTATT chr4 + 94230402 45157074 45157073 45157275 45157074 45157073 45157275 202 CTTTTTTTTTTGCAGCTTCTTCGAGATCAATTTCACTATAAACCAATCCTAACAAAAGAGCAGTTTCTTCAGTTTGGTTTTGCAGAAAGAAAAATGCAGATTGTTTGTGACATTATTAACTGCGTGGTGAAAAAACATAAGGAACTAAGTAACCTGAATAAGGTA--CTGATCAAATGATAACTTCATTGTGAGGGGTGTTATT ..x...::.:.............x.........x.:...........::.:......:........x.:..:.x...x.........x.:.....x..:...........:...x.x..:..:...:.......:..:......:....:.::..xx.x......--:.x..x..xx....--..x..xx...x.x:..:.... 165M2D14M2I21M 153/200 76.5% 202/94230402 0.0% 4/200 2.0% 129146614 61067941 +37074 chr4 + 190214555 174316012 174316011 174317855 1844 CTGTTACCTTAAGAGTACTAAAAACTCTTT--GATCTATGCGGATAGCCATTTTTAA----TTAAAATAGTATGTTTTTCTTCCATCT---------GTAAATAATATTTTTAGATATTTGACTCTTCT------GTGAAAGGAAAAGGTAATCTAAAACTTAATTT--CTTCACAGACAGAAAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCTCTGGCTATAGTACAGCATCATC---------------------AGATTCAACTCCCAGAGCCTCTACTGTTAATTACTGTGGTTTGAATGAGATTTCAGAGGTAA---------GAAAATGCTTAGATTATTTCCTTTCTAA-ATGAGGAAAACAAGCAAGCATTAGCTTTTGTTGTAAATATTGCTAGCAAGAAAAATAGCAAAC---GCGAATCT---------TAGTCTCTCAAAA--TTCT-TTCATAAGTAAACAGTACTTAATGCAATGTTTCAAACTGTGTTTTGTACATTCTCGGTCCATCTTTGATGATGGTTTACTTTGA-GAAATCATCTAAATTTGTTGCTTTTTAAATTAAAGGAAACAACAATCCAGAAAATGGAAAGGATGAAAAAAATGTAAGTAACAGAAAGGGGCAACAGAAATTCATTTCTCTATAGGGAATTGTATTGGATTACAGTATATATAGAATGTGCATGTGTGTTTCAAACCTTAAAGGTCTCTCAATCAGGTGTGGAATTTCCTTCAGGACTCCACTGGATAATAAATCCACCTACAGTTATGTGTTTGTGAGATGAGTCACTGTTTTAGTTTCCAACAAGCGATTTAAAACTTGTTGGAATTGTTAATGGAATTAACTGCAGAGAGAATACAAAGATATT-----TTTGGTTGGTAACTAATCAAGAGTATTATCTAT-TTTTGATAACTGATTTATCAAAATATTAAATAATATATATAGATGGATGGTTTGGAGACATTTTCAGTGTTGTGAAAATATCACTGGTGTTTTTCGGCAAGTTATTGATGAGATACTAAAAATGATGTTTTTGTCTAG----TACA-AATGGTGTGATTTTTCTAAAGAGCAGTTCAAAGGAAATATGAAATGAAATTGCATATAAGATGATTATGCAGCCTACTACTATAGAAAATTATAATATTATTTAGAAATGCAAAAAGTACTTAACTTACACTTCAAGAATATGACTC--------ATAATCGACTCCTCTTTGT--------CTTCCCT---------CTGGTCATACTTAAGTTTATTCATAGTAACTGTACTTATAGATAAGAAAAATATT-------CAAATTTATTTTAGGCTAAAAAGCATAATTTCAACAACTAAAATGCTATGCTTTATTA-------------------TGAATTATTGATTTAC---TTAATATATT----------------------------ATTTATTATATTTCAGGTTTGAAGAAACTGCAGAGTTACTGAAATGTCCAAATCACTACTTGTAGGATTTTCTACATGAACTTTTTTCTAGGACTTTGGTTACTATACATAT-TGTATATTTTAAGAATTC---------TTTATACAATTTTAATATACTGCAATACTGCAGTTTTTGACAATTTGGATTCCATTTGGTA--TATGAATTTTTGCATTCATTATTGAATAA--CTCTTTTAATATTTTTGAGCAATGATTATACTGCTTT--ACCTTGTGTCACTTTTTTTTTTTTTAGGAAAAACTCATGTTCCAGTATATTTCTC-------TTACAGAGTGAAGTCATTACAGCACTGTATTTCTGTGTTGACATTTGTTGGCAGTG---TGCTAAGTA--ATGTTTTTTAAAGCACAGGCTTGAGGACTATGGTTTACATCCTGTTGGAAACATTCCAAATGGGACTTGTGTATTATACCCAGGAGGCTCTCATATATACCATCTTGGCATCTGTACTGATGAATAAGTTATAATGAACAGTTAAAAATGCTCATTGAAA chr4 + 94230402 45165241 45165240 45167135 45165241 45165240 45167135 1895 CTCTTGTCTTCAGAAATAACAAAGCTATTTTGGATCCTCGCAAGTAGTTTCTTTTTACCTTTCTAAACAATGCATTCT-CTTCTGTTTTTACATACGGTAAATCAAGCTCTTTGGTAGTAGAC-CTTGTAAAGAGGGAAAAGGCGAAGGTCACATAAAAATGAGTTTTTCTCCATAGATACAGAAAAGAAGGAAGAGATAACAGAGTGTCTTCATCAGTCGTCTGGATACAGCTCACTGTTATCTCATCTCCCAAGGAGTCCCACAGACTCATCTCCCAAAGTCATGATAACTAATTCTCATGATCTGACAGAGATTTCAAAGGTAATTAAAACTGGCAAATCCTTCGATT---TCCTTTCTGATGTCAAGAGAACAAGTAAGCATTAATATCAGTTGTATCTGATACTAGTGAAAAACA-AGGAAACTGTGCAAACCTGTTCTAGATCTGTCTCTTAAAAAATCCTGTTGCTATGTAAACAGTGTTTGAAGTTGCATTCTCTA-TGAATTTTTCAGATTGGAAGTCCATCT--GAAGAACGTTAGCTTTGAAGAGTTCAACTAAACTTGTTGCTTTT-AAATTGCAGGAGACAACAAGGCAAAGAATGGAAAGGATAAGTAAAATGTAAGTAATGGGAAAGGGCAGCAGGAATTCATTTCCCAGGAGAGAGTTGTACTGGACTAAGGCTTACAGAGAATGTACATATGTGTTCCAAACCTCAAAGGTCTCTACATCAGGTGTGGCATTTCCGT-ATGACTCCACTGGATAATAAATCCACCTACAGTTCTATATTTGTGGGATGAGTCATTGTTTTGATTTCTAAAAAGCAACAGA---------GGCATTCTTAATAGTATCAACT----AAAGATTA-AAGGGTGTTTAGAATTCAATTGACAAGGAAT-ATCAATGTTATTTATCTTCTGATAGCAGTTCCCTGGAA----TGAGCAACTTTTCTTCATGAAAAG-----------TAACTGTGTTTTAA------CTCTGCTGTTTT-------ATTATTTAAGAAAAAGAAAAAATGA--TTTCAGCCTAAGCATTACATTAAGGTGTGTTT-------AATGCTATTACTGAGAATTATAA---GTAATTTTGTAAGAAATACTT-------TTATTGCTAAGGAAA--------------CAGCAATGC-------ATTTAATTCATATTCTATAAATGTCTGTCCTGAATAAATTATTGCCTTCT-TTTGTGATTTAACCTTCCCTAATTTTGCACGGGTTACTTCTTTCTGTGTGTCTACTTAAGGTTTTTAGATATTTGATAGACATTTAGCGTGCAAACCAATTGCATGAGAGGATGCTTAGTTT----------AATGCTGAGTATTAGTATTGTGAATCCATTTGAAGGTAAATAACTAATTTGCCTTTTAGTGTATTTTAATAAGTATGTGACTATGTAAACAAAATTTAT----TTTCAGAATTGAAGAAACCTCAGAATTGTTGAAAACCTCAAGTAAC-ACCTCTGAAAAGACCTGAAAGAACAGTTCTTCAGACC--TGGTCTCTGTAGATGTATGGATA---TAAAAATTAATATGTATGTTTGTACAACATTA-----------------AATTTTTAATATATCAAATTT------GTAATTGTCACTGTTTCTATATTTCTTTGAGTAAATATCTTTTAATGCATCTGTATATTTATGATTTTATTTTTAAGTTTACCTCCCTGACTTTTACTTT--GTAAAACTGTTGAAATAGTTTCTCCCTCTCTCCTTTTGTAGAGCAAAGTCATCACAGTGGTGTATTTTTGTGTTGACATTTGTTAGCAGTGTGCTGCTAAGTAGTGTGTTTTTTAAAGTGTGGGCTTGAGGACCGTGGTTTACATCCTATTGGAAACACTCCAGCTGGTACTTGTATATTGCACCCAAGAGGCTTTATTGCATACTATCTTACCATTTGTTCTGTTGAATAAGTTTTCATTAAAACTTAAATACACACTTCTAAA ..x..::...x...:xxxxx...:..x...--....:x:..:::...::x:....x.----.:x...:.:.:::..:.-....::.:.---------......x.x::.:..x.:..x.x...-...x.------.x:.....x:.....x.:x.....x.x.:...--..:..:...:.x.:...:x:.:.x.....x:x...x:x..x...x..x...x.....x..:..:x..x::.:...---------------------...:...x......:..:.x:x.:x::.....x:::..:.:...xx.........:......---------.x....x...x....---........:.-:.x.:..:......:........::x.:x......xx.:x.:....::.:...x.-..x....---..:..:..---------:x......:....--.:..-..xx..x.........::..:.x.:x:::..::xx.-..x:....x:.x...xxx:........--..x..xx...x:......-..:x...x.....:...........-.....:x....:.......xx..:.:............:.:x.............::.:..:.....:...:..........:.x:x..:..:.....:....:..x:.:x..:.x.......:...:......:.......:..........xx...........x......x.-.x................................x.:.:......:.........:......::....:..x....:.:xx.---------..x...x.....:.x..:....----.:...x..-..:.:.:..-----..:::...::..xx...-.xx.:.:....:...-..:.....:.x.x.::x.x:..----.:.::..:x.x.x.xx...:.x:.-----------.xx.x.....x.:.------.x...x......-------:.....x.x..:.x.xx........--...:x.:...:----....-x.x......x..-------.:x..x:..xxx::...x...:.---.x....x::..x:.:..:x..-------:..:.:...x:....--------------:..x.....-------.:....:.:.:.:.::.x:...:.xxx..--------..x..:.x..:..-.....--------.......---------.x...:.:x::.xxx.x.:.x:x..x.x.xx..x:...x.x..xx..x.:.:...-------....::x...x:.x.xx.::.x..x..:...----------......:x.:x...x..-------------------.:...x.:.:....:.---...:.:....----------------------------......----......:x..........:x....:..::.....xx::...:.x..-..:.x.:::.xxx:..:x.x....xx..:.::..:x.--....:x..:..x..:.-..x...---...:....x---------...:.....:x...-----------------.:.....:.:.xx.:::...:------...--.:.x.x.x...x:..x:x.:x....:...--x.........::x.:..x::.x.x..x..x:.::...--.x:..::x..x..xx:....x:...--.x......xx..xxx:...x.x.::...-------..::....::.......:....::x.......:................:......---.........--:............::::...........::.............:.........:....:x...x......:....::.....:......:.xx.::....:.....:x...:...x...x..........x.x..x..x.x.....x.::.x.x.:x... 30M2I25M4I17M1D9M9I26M1D5M6I32M2I75M21I62M9I15M3D10M1I55M1D7M3I8M9I13M2I4M1I36M1D27M2D18M1I25M1D175M1D82M9D22M4D8M1D9M5I17M1D15M1I22M4D24M11D14M6D12M7D25M2D11M4I4M1I12M7D23M3D21M7D15M14D9M7D29M8I13M1D5M8I7M9I55M7I31M10D17M19I16M3I10M28I6M4D46M1D37M2D16M1I6M3D9M9I14M17D21M6D3M2I29M2I37M2I25M2D28M7I56M3I9M2I160M 1176/1704 69.0% 1895/94230402 0.0% 331/1704 19.4% 129150771 61063784 +3184 chr4 + 190214555 174325515 174325514 174325597 83 CATAGTGGTATGCACCTGTAGTCCTAGCTACTCGAGAGGCTGAGGTGGGAAGATAACTTGAGCTGAGGAGGTTGTGGCTTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:......--....x......:.:.......:..:........x:xx.x::.xx......:.:x..:..x..xx....x:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 98292318 91922237 +3005 chr4 + 190214555 174326217 174326216 174326263 47 TGTGTATGTGTGTGTGTGTGTCTGTGTGTGTGTCTGTGTGTTTGCTC chr4 + 94230402 75629972 75629971 75630018 75629972 75629971 75630018 47 TGTGTGCATGTGTGCATATGTCTGAATGTGTGTCTGCGTGCTTGCCC .....:::......::.:......x:..........:...:....:. 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 98696245 91518310 +12780 chr4 + 190214555 174333204 174333203 174333672 469 AAGGATGAATTGCTCTA--ACATTGGTTTAGAATTTTTCTTTATATGATTCAATTTTGTGGTCTGGCAAAGGCCCAATAGTCATTTATCTAGTATGCATA-CCTTTCCACAGCTGGATTTTCAAATATGATGATAAAGTTCATATGACAGACCTATTCTGAA-AATAAATATGTCAGCAGGCTTTGCTTTATTTTATGCATTTATTCTGGATATAACATAACTTGGTACAAACACAGAATACAATTTAAGACATTTTGCCAGAGCTCTTCAAGTATAGCATCGTTTGAGATTGTGGAAGGTGATTTAGAAACACCTGGGTTGAGTATTTATATCCCAGCCTTAAATCCTAAAAGCCTTGCCGTTTTATAGTCCTTTCGGGGAAATACAGGAACTACATTAATACTTGTTAGTGTAAAAGTTAATGCATTGCTGGAAAAGCCTTGTAAAAAATCAGAAAATTATGCAAAAAATG chr4 + 94230402 45180926 45180925 45181378 45180926 45180925 45181378 453 AAGGTTGTGTTGTTTTTTTAAATTGTTTTACTGTATTTCTTCCAAT----TAAATTTGTGATCTGGATGGTGTTCAGTCCTCATTTATCACTTTTGTTTATCCCTTCTGGAGATGAGTTTTCAAATCTGGTCTTAAAGTTCACTTAACATGC--ATTCCAAATAGTAGATATGGTGGTAAGTTTCAGTTTATCTTATGTATCCCATCTTAAGATAGTTCAAATTCATACAAAC--------CACTTAAA---ATTTAGTCAGAGTTGGACAAGAGTAGTTGCACTGCAGATTACGGAAAGTGATTCAGGAACACCTGGAGCCAAGATTTATATTTTTACC-TAAATTCTGAAAGCATTGTGCTTTTATGGCTCTTCAGAGGAAAGGCAGGAACTGCATTAACACCTGTTAGTGCAACAGTTAATACGATGTTGACTAGAACT--TAAAAACCCCAGATATTAGGGTCAAAATG ....x..x:...:.:.x--.x....x....xx:.x......:xx..----:..x......:.....xx::x.::..:.xx.........xxx.x..:x..-..:...::x..x..::.........x..:.xx.........:x.:...x:.--....::..-.:..:.....x::.:.:.:..::x.....:.....:..::xx...x:.x...::x:..x..x:.......--------..x..x..---....x.:.....:.xxx....x:...:xx.::.xx.....::....:......:..:.........:x:x.:x........:::x:..-.....:..:.....x...:xx......:.::...:x.:.....x:........:......:..:........:..x.......:.:x..:..:xx.::x..--......x:.x::.x....x.xxx...... 17M2I27M4D50M1I51M2D8M1I70M8D8M3D88M1D101M2D29M 298/449 66.4% 453/94230402 0.0% 24/449 5.3% 129152278 61062277 +5445 chr4 + 190214555 174342339 174342338 174342502 164 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA-----------------------------------------------GGGAGGGGAGGGGAGGGGAGGGAAAGAAGGGAAGGAAGGAAAAGAAGGGAAGGAAGGAAGGAAGGAAA chr4 + 94230402 1500702 1500701 1500912 1500702 1500701 1500912 211 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaa .....::.:...:.:x..::.....:.:x..:....:.....:.:::.:x::.::.:....::.x:.:...x.:x.x.::....:x:.:...:...-----------------------------------------------...:.......:....:::......:...::..x.:..:..:.:::.....:.:.:..:.:.:..... 96M47I68M 103/164 62.8% 211/94230402 0.0% 47/164 28.7% 172841637 17372918 +3142 chr4 + 190214555 174357226 174357225 174357298 73 TGTGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGTGAAAGGATTGCTTGAGCCCAGACGTTCAAAGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........x:........x:xx:x.:.x::.....:......x.:.:x::....:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 98324021 91890534 +3326 chr4 + 190214555 174358049 174358048 174358119 71 GTCAAACAAAACAAAACAAAACAAAACAAAAAAAAACACAGATACAAGGGCTTTTCAGGTTAGTCCTAGAG chr4 + 94230402 6780996 6780995 6781066 6780996 6780995 6781066 71 gtcAAGAAAAACAAAACAAAAAAAGACAAAAAAAAAGACACATGCAAGTCCAAAACATGTTGTTTCCAGAG .....:x..............x..:...........x...x..:....xx.xxxx..x...:x.:.:.... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 167577053 22637502 +3163 chr4 + 190214555 174422225 174422224 174422309 85 ACCATGTCTCAAAAAAAAAAAAAAAAAAAATTCACAAAGTGATGACTGCATTTTCATTCCATCAAAAATAAAAATTATTAGAGTT chr4 + 94230402 81073245 81073244 81073329 81073245 81073244 81073329 85 ATCATTCCATGAAAAAAAAAAAAAAAATAGTTCAGAAAATGAAAGCTGGCTTTTTACTTAGAGAATAAAAACAATAATTATAGTT .:...x:.x::................x.:....x...:...x::...xx....:.:.:x:xx..x..x..x...x....x.... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 93348980 NA +4295 chr4 + 190214555 174423785 174423784 174423921 137 GTGGGCATGTCACAGTCTGACTCAGTGACTCATGTGCTGGCAGTGGCCACGTAAATAGAGCTACTG---TGTCTGAAAGCAATGGGTAGCTAGAAACCTTTTTG-ACAGCTCATATGAAAA-------CTTAAAGAATTTCAAAACAG chr4 + 94230402 45210540 45210539 45210685 45210540 45210539 45210685 146 GCGGGCATGTCACGGGCTGACTCGGTGACTCAGGTCTTGGCAACTGCCCTACAAACAAAGCTACTGAATTGGTTTGAATC--TGTCTAATCATAAAATTTCTTATGCAGCTCACTTGCAAAGATATGCTTTAAAGAATTACTAGAGAG .:...........:.x.......:........x..x:.....::x...x:::...:.:........---..x:.x:..x.--..xx..:::.x...x:..:..:-:.......:x..x...-------:..........x.x.:.x.. 66M3I11M2D22M1I16M7I20M 95/135 70.4% 146/94230402 0.0% 13/135 9.6% 129213245 61001310 +3011 chr4 + 190214555 174445771 174445770 174445817 47 TTCCCTGTCTCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGACAGATT chr4 + 94230402 55094093 55094092 55094139 55094093 55094092 55094139 47 TTCCCTTCCACAAGGACAAAAAAAAAAAAGAAAGAAAGAAACAGATT ......x:.x...::.x..............:...:...:....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 119351678 70862877 +3564 chr4 + 190214555 174445781 174445780 174445831 51 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGACAGATTGTCAATATCATATG chr4 + 94230402 75300455 75300454 75300505 75300455 75300454 75300505 51 CAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATCATCTG ...............................x...xxx...:......x.. 51M 45/51 88.2% 51/94230402 0.0% 0/51 0.0% 99145326 91069229 +3194 chr4 + 190214555 174447921 174447920 174447975 55 TGTGTATATGTATATACATATGTGTATATATATACACATATGTGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:.::..::...:....:.......:.:...x.x...:.::............ 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 118753467 71461088 +3496 chr4 + 190214555 174454575 174454574 174454744 170 TTAAAAAAAATTGAGGAAATTAATTACTTAA--ACAGAAACCCAACTATTCATTGCCAATAGATCTAGCTTCCTGATCAAGATTTTGATAAGGTCTCCCCAAGGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTGGACAGAGTCCCTCTCTGTTGTCCAGGC chr4 + 94230402 5756190 5756189 5756346 5756190 5756189 5756346 157 TTAAAGTAATTTAATAGAATAAATCACTCTACTGCAAAAATTAAACTTTTCA---------AGTTTATATTACTCTTCAAAATCTGTTTC---TTTCCTTGAGAGTTTTTTGTTTGTTTGTTTGTTTTATTCCATGTGTATCTTAGAAAAAGACTCTC-CTATTG--CAGGC .....:x..x..:.x::...x...:...:x.--:..:...::x....x....---------::.:..xx..x..xx....:..:.xxx.x---.:...:::..:x.......................xx.::x...x.x.:..:..x.:..x.:...-..:...--..... 31M2I19M9D29M3D65M1D6M2D5M 104/155 67.1% 157/94230402 0.0% 17/155 11.0% 168698385 21516170 +3004 chr4 + 190214555 174463319 174463318 174463377 59 GTTTTTTGTTGTTGTTGTTTTTGTTTTTTGTAACCTTATCTTGGAAGTGACATTGTTTC chr4 + 94230402 74926526 74926525 74926584 74926526 74926525 74926584 59 GTTTTTTGTTGTTGTTGTTGTGTTTTTTTTTAAACCTAGTTTGACATTGACTCTGTTCC ...................x.xx......x...x.:..x:...:x.x....x:....:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 99536793 90677762 +3060 chr4 + 190214555 174486875 174486874 174486933 59 GTGCCTGTTATCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x...x:.:...........:x........x.xx.x...x.:...........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 98453669 91760886 +3204 chr4 + 190214555 174488855 174488854 174488955 101 GGAAGGAAGGAATGAAGGGAAATG----AAAGACAGAAATGAAAGAGAGAAAGGAAAGAAAGAAAAGAAAAGGAAAGAAAGGAGGAAAGAAAGAAAAGAAAAGGA chr4 + 94230402 57629684 57629683 57629788 57629684 57629683 57629788 105 GGATGGGCGGACAGAAGGAAAGTGTTCAAGCACCAGAGAGCAAATTAATACCCATAAAAAAGAAATGAAAAGGAAGAAGAAAGGGAAAGAGAGAGGAAAAAAGGA ...x..:x...xx.....:..:..----.:x:x....:.xx...xx:.x.xxx:x..:.......x.........::.:.:::.......:...::.:....... 24M4I77M 66/101 65.3% 105/94230402 0.0% 4/101 4.0% 116859171 73355384 +7009 chr4 + 190214555 174491978 174491977 174492110 133 GGAGTTGTATCATAGTCTTGAAAATGAATTCCCTTAGAAGTTGTGATCTTCATAATAGCACCATTTAAAGCATCATCTTCAATGAGTGTTATCAATCCATTGGCAATCAATGGTGGGCTAAAAATAAAGAAAA chr4 + 94230402 45217664 45217663 45217796 45217664 45217663 45217796 133 GGTGTTTGGCTGTATTCTTGAAAGTGAATCCCTTGGGATGCTGTAATCTTCATAACTTCTCCATTCAGAGTATCATCTTCAATTATTGTTATCAGTCCTTCAGCAATTATTGATGGGCTaaaaaaaaaaaaaa ..x...xx::::..x........:.....:..:.x:..x.:...:..........:xx.x.....:.:..:............x.x........:...x.::.....:.x..:...........x...:.... 133M 99/133 74.4% 133/94230402 0.0% 0/133 0.0% 129274314 60940241 +8954 chr4 + 190214555 174493121 174493120 174493316 196 TTAAAAGAAAATAGACATAGTTTTACTTACTCCAAAATTCCATAGTATTTAATCATATCCTTGATATGATCCTTATATTCTATATATTGTCCCATGTTTTCTTCTTTTTCAATTGATTCAAGGATGGCTGTGTTAACAAAGCCTGGACAAATGGCATTCAGTCTCACACCACTGTTCATAAGATTAGCAGCCAACT chr4 + 94230402 45218858 45218857 45219053 45218858 45218857 45219053 196 TCAAAAAGCAGTGTATCTGATTTAACTTACTCCATCACACCGTAGAACTGCATCATATTTTTGATCTCATCCTTATATGAATAATATTGTCCCATATTCTCTTCTTTGTCTATTGACTGAAGAATTGGTGTATTGACAAATCCTGGACAAATTGTGTTGAGTCTCACACCATAGTTTTCCATGTTAGCAGCTAACT .:....::x.:.:x.:x.::...x..........xx.:x..:...x.:.xx.......::.....x.x..........xxxxx............:..:........x..x.....:.x...:..x.x...:..:.....x...........x.::..x............:x...:x:x.x:........:.... 196M 141/196 71.9% 196/94230402 0.0% 0/196 0.0% 129274263 60940292 +5376 chr4 + 190214555 174495543 174495542 174495702 160 CTCACCGCTGCTGAGCGTGTGAATCCAACTATGCCATGCTTTGAAGCACAATAAACCGGCTGCTGTGCAACGGGCATGAGTCCTGAAACAGACAAATATAACATTTAAATGCTTTGATGAAAAAATAAGTAGACTATACCCAGTAATGA-------AAATGCAAATG chr4 + 94230402 45220245 45220244 45220396 45220245 45220244 45220396 152 CTTACTGCTATTGAGCGTGTAAATCCAATTACACCATGCTTTGTAGCACAGTACACAGGTTGGAATGCAGCAGGCATGAGTCCTTTAAAATAAAAAGTTATC---------------TGAATAAGGATGTTGGGTACCCCTACTTATGATGACCTTAAACACAAATG ..:..:...::.........:.......:..::..........x......:..x..x..:..xx:....:.:............xx..x.x.x...xx..x.---------------....x..:x.x..x.:x..:x..:.x.x....-------...::...... 102M15D32M7I11M 105/145 72.4% 152/94230402 0.0% 22/145 15.2% 129275298 60939257 +3338 chr4 + 190214555 174504682 174504681 174504755 74 GTGCACCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATTGCTTTAACCTGAGAGGTGTTGGTTGTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:.........x.::........x.xx.x...x::...x....::::..x.x.x..:..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 98471478 91743077 +7575 chr4 + 190214555 174517960 174517959 174518153 194 AGATAA--CTCACCAAATTAATTTGCAGAGTTTTTTCCCAGTTTTTCTCATTATTCACTCCAGCATTATTGACCAAAATGTCCAGTCTTCCAAAGTGGTCTACAACTTTTCTAAAAGTGTCTAATTATAAAACAAGATATTAGTGATACATTCTTA----TTTTCCATGTATACATTTAAATCATGTCCTATGCCATGAG chr4 + 94230402 45238869 45238868 45239058 45238869 45238868 45239058 190 AGATAATGCTTACCAAGTTAATTTGTATAGTGCTTTCCCAGTCCTTCTCATTGTTCACTCCAGCATTATTAACCACAATATCCAGCCTTCCAAAATGCTCAATTACTTTTTTGAAAGCACC----TATAGTAAAATGCAAAGGTGAAAT-TTCTTAGCACTTTTC-----GTTCAGTTATACAGTGCCCGATAACATGAG ......--..:.....:........:.x...x:.........::........:.................:....x...:.....:........:..x..x.:x......:.:....:::.----....:x.x..x::.xx:....x.:-......----.....-----:.x..x...x.:x:..:..x..:x...... 6M2I113M4D24M1D6M4I5M5D30M 139/184 75.5% 190/94230402 0.0% 16/184 8.7% 129279091 60935464 +9534 chr4 + 190214555 174521874 174521873 174522460 587 CCGGGCTGCCTTCAGGTTGTTGCTTGTTGAGAGCACGTTCCCAGTTG-ACAGATTGATTCCCCTGTCTTACCTCTCAGTTGTTGCTGGTCAGCCACATCGCACTGGATGAACAGAGTCTTCTGAGGTTCAAACTGCTCATCCAGGGCAGCTTTACACTGTACACCTGCTTCAAGATTCCAATCCACCAGCGCTACCTATAGACAAGAGGAGAGGAATCGCGGGCCTGCGCAGCTCACGAAATAGACGGACAAACAATAAACACACAAGAGGCTCCCCTCCTGGACCTGAAATTTGGCAATTAGGTTTGGGTTCCCTCCCAGCCACTTCTGAGGTGTGCTCACAGCCTCAGCTTCAGCAAATTTTGGAAGTGGCAAAGTGGG--CACGCCG-GGCGCGGCCTCCCTGTCTCCGCCAGTGCACCTCGGGCGGCGGGGCGAGTCTCGGAGTGTGTGGGCAGAGAAATTTCCGCGGCTGGGCGCCGGGCTTACCTTGGCGCCCTTAAGCAGCAGCGCCTCTGCAAAGGCTCTGCCTATGCCCTGAGCCGCGCCGGTCACCAGCGCCACTTTGCCGTTCACGTGCATGGTGCAGCC chr4 + 94230402 45242239 45242238 45242629 45242239 45242238 45242629 391 CCGGGCT-CCGTCAGGTCGCTGCATGTCGAG-------TCGGAGCCGCGCCGGTGGTTTCCTC---CTTACCTTTCAGCTGCTCCGTATCCGTAACGTCGCACTGGATGAACACCGTCCTCTGCGCTTCGAACTGCTCGTCCAGGGCCGCCTTGCTCTGCTGCCCGGCCTCGGGGTTGCGGTCCAGGAGCGCTACCTA-------------------CCCGGG----------------AACGGAGGGACAGA---------------------------------------------------------------------------------------------------------------GGGAGAGGCTGAgcggggccgcgccgaggcgggggctgcc-----------------------------ggcg---cccggAGAG-------AGGGAAG---CGGCGGCTCAGGGCTTG-CTTACCTTGGCTCCCTTGCCCAGCAGCGCCTGGACGAAGGCTCGGCCGATGCCCTGAGCCCCGCCGGTGACCAGAGCCACCTTGCCATTGACGTGCATGGCGCTGCC .......-..x......:.:...x...:...-------..xx..::.-:.x.:.x.x....:.---.......:....:..:.x.xx:..x.:x..:................xx...:....x.x...:........:........x..:..:.x...:xxx..x..:..::.:..x.::....xx...........-------------------.x....----------------..::..x.....:.---------------------------------------------------------------------------------------------------------------..:..x...x:..:...--.:.....-....x..x..x..-----------------------------....---.:.....x.-------..:...:---.x......x:.x..:x.-...........x.....:xx...........xx:.:.......x...x............x.......x.....x.....:.....:..x..........:..x... 7M1D23M7D9M1I15M3D132M19D6M16D14M111D17M2I7M1I13M29D4M3D9M7D7M3D17M1D107M 294/387 76.0% 391/94230402 0.0% 204/387 52.7% 129279635 60934920 +3580 chr4 + 190214555 174536501 174536500 174536704 204 ATCTCAGTGCTTTGGAAGGCTGAGGTGAGAGGATGGCCTT------GAGGCTTGGAG----------TTAGAGACCAGGCATGGGCAA---TGTAATGAGACTCTGTCTCTACAAAAAAAAATTTTTAAATTAACTGGACATGTTGCTGTGCACCTCTAGTTCCAGCTACTTGGGAAGCTGAGACAGGATATCTGCTTGAGCCCAGGAGTTCGTGGCTGCAGA chr4 + 94230402 76033083 76033082 76033278 76033083 76033082 76033278 196 ATTTGAGGACATTGGGAACCTGATTTGAGGAAGTAGACTGAAAGAGGAGGGCAGAAGGCAGTAAAGATTAGGGACCTGGTTTGGGAAAGTATGTAATGT-------------CATGAAAGGAT--------------GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ..:.x..x:.x....:.:x....xx....::::.:.x..x------....x:x.:..----------....:....x..:x....x..---.......x-------------..x:...::..--------------..:.:::x.:x......x.x................::.:......x.xx.xx.xx::.....:.....:..:.:xx.....:... 40M6I11M10I21M3I8M13D11M14D86M 118/177 66.7% 196/94230402 0.0% 46/177 26.0% 98503418 91711137 +3080 chr4 + 190214555 174542967 174542966 174543016 50 AAAAAACAAAAAGAGAGAGGGAGAGAGAAAAAAAAAACCAAAAGCAAAAC chr4 + 94230402 62107677 62107676 62107726 62107677 62107676 62107726 50 AAAAAAAAAAAAGAGGGGGGGAGAGGGAACCCAACAACCAAAAGCAACAC ......x........:.:.......:...xxx..x............x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 112435290 77779265 +3006 chr4 + 190214555 174543521 174543520 174543576 56 TGTATTTGTGTGTATATATACACATATATGTTTACGTATGCTTATGTATAAGTGTA chr4 + 94230402 55694448 55694447 55694503 55694448 55694447 55694503 56 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTA ...x:....:..:...:........:.:...x.::....x..:.....::x..... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 118849073 71365482 +3033 chr4 + 190214555 174544198 174544197 174544290 93 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAG chr4 + 94230402 78784176 78784175 78784268 78784176 78784175 78784268 93 AAGCCAACAAAAGGGATTGAGGGAAAGCAAGGCAAAGAGAAAAAACAAAACGAAAGAAAAAAGGCAATACTGGAGGGAAGAAGAGGCAAAAGG ...xx.:x..:.::..xx..::.....x...:x.:.:.....:..x:...x...:...::....x.:x.xx.:...:.:...:..:x.:..:. 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% 95760022 NA +3027 chr4 + 190214555 174544247 174544246 174544333 87 AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAGAAACAGGGAGGAAGGAAGGAAGGAAGGAAGGAGAAAGAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ..:x.....:x.:.:.xx:x..:x..:...:.....:..........:...:...:xx::..:...x..::x.x:.:...x..x... 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 99302740 90911815 +3064 chr4 + 190214555 174573397 174573396 174573449 53 GAGGGATGAGCGTTTTTTCTTTTTTTTTTTTTTTAATGAGACACAGTCTTGCT chr4 + 94230402 35640279 35640278 35640331 35640279 35640278 35640331 53 GAGGGATGAGCATTTTTGTTGTTTTTTTTTTTTAAATGAAGCTTAGAATTGCT ...........:.....x:.x............x.....::.x:..xx..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 138933118 51281437 +3482 chr4 + 190214555 174604907 174604906 174604989 83 CATGGTGGTGCGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.......--..x......:.........::::........x.xx.x...x::......:....:..x:xx:..:..:.. 11M2D70M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 98571710 91642845 +3380 chr4 + 190214555 174636297 174636296 174636379 83 CATGGTGGCGGGCACTTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAAGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x.....::...........::........x.xx.x...x::.........:.:.:x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 98603100 91611455 +8829 chr4 + 190214555 174636916 174636915 174637747 832 CATATTCTTGAAAAGTGTTCATTTTTATTGTTTCGGATCAAATTATCTATAGTTACATGTTAAATACTTTATACTGTTCACAGGTTAATGACTCTGATAG-AGAGTCTGTTAGTT-----GCAAAATTGAACTAAATATAATATAATGAAAAACAAGTTGATGAAAT-CGTGCATAAATTTTTAAATATGTTTTCA-----GTATAATTTCCTGGAAAAATATGACAGCAT----CTGGACAAGGAAGACAGACTTAGACATAAGACTCAAGAAGACAGAAAAATAATT--TACACCATAAAAA---CCATAAAATAGCAATACTTCTTTTGGTAGTCCTTTAAACAACTTGACTCACTAATAATGAAGTCACTGTATATCATATAAAGATGGTACATGGAAAATATATGGCACATTTTCTTTTTGTTTTGTTTTTCATAGCATATCATATTATATCTGTAGAATGTCAGGG--TACTTCACTCTATTTCCCCCCCCATATTATCATT-TATCATACATTAAAATACAAATTTAAGTAATGACCATTGAATAATTCATAGAGAAAAAAGTGAAGAAGTGCAAAATTATTCAAGCATATTCA------AGTACAATTTTACATCTGAATCCTTTCCTGCCATTTAA-------GTCACAGCTCCCTAG--------TATTAACCACCCAGGCTG--GATACTG----------TGTATGTGAGCGGGGTTGCCCAAAGGCGCCATTGCTAAAACCACCCCAGAGTAAAAGCAGCTATTAAAATA-----AAACAACTTAA---------TCCCCTGTACTTTTGTTATAGCTTTACTCTAAAAACACACAATATGGTTAATATGGTTTGCTGCTAGTTTTTTTAAATTCATATTACTTTGTAGA chr4 + 94230402 45303464 45303463 45304316 45303464 45303463 45304316 853 CATTTTCTTAAAAAATGTTC---TTTATTTTT---GAACAAAATATCTACAATGACATGGTGA-CACCATAAATTTCACATATTTTAAGACTTCTGTCTGCAGAGAATGTCAGTTTTAGTGCAATATGATATCG----TAATACAATAAAAAGAACTTTAATCAAATGCATGCACAACACATTAATAGTTTTACCAAAAAGGAAGTATTTGAGATGAAATTGCCATTGGATGTTACTAGACAGAATTCACAGGAGAATGTTTAATACTCA------CAGACAAGTTATTAATACACTATATATttttccttttttttcttttatttttttctgtattctttAAAAT--CTGGGATCACTAACACACAAAATA-TGTATATTATGATAAAACTTTGTGGCAAAAGCTTATGGCACAATTTCTTTTAAT----------ACAGCTCACAATTACACATTCCTGGAACATCAGTAACTACTTCAGTCCATTTTGTCCAT--TAACATCACTCTGTTATGCAACAAAATATAAACATAATAAATGTTTCTTGCATATTTCACAAAGATAAAAGTGATGAAGTGCAGTAATATTCAAGAATGTCAAGAAGACAGGATGAGCCAACAT--------TTTTCTGGCATTTAACCTGCTGGTTCTAGCAATCTAACCTGCTTCCACAAGCCTTCCAAACTGATAATATTTCAGTAACTACTGTAGGTGATGTGTGTTGCCTGAAGGCACCTTTTCCATAACCACTTAAAAATAAAA-CACTTATTTTATTATTAACAAGTAGCTTAGGTTTGTGATTTATATATATTTTTCTTATTAGTTTTCTCAAAAAGGAAAAAA-----TTATGATGATTTGAT----ATTGTTCTGATTGTATAGTAAGATGTGGA ...x.....:....:.....---......x..---..x....x......:.:.x.....x.:.-:..:x..x.:.x:x..:.xx....x:x:....x:x.-....xx...:....-----....x..x:x.:::----.....:...:....:x.xx..:..x....-.:....:..xx:x....xx:.x..x:..-----.x.xx....xxx:x:...x.::x.:x.x..----..:....:::xxx....:xxx.x::x...x.....------....x..:.x...--.....:...x.xx---..x.xxxx.xx:xx..:..:...:x...x..:..x...:--..x.:x.......:.xxx..:x:.-.......:..:xx..:.:xx.:::xx:...::x.........x........x:.----------.:...x:.:x..xx:.:..::x.:...::....x:--.......x..:....:x:..x:--..x:....:.-.:.:..:..x:......:...:x...xx....x::x...x...x....:.:...x........x........:x.x........x..:.:x.------..x.::.x::x....--------...:...x.......-------..:x:...xx:...:--------:.:x.:..x:...::...--:...:.x----------....x....xxx.x......::.....:..x..x.:.x......::x.:.:.....-..x:....xx.x..-----..::.:....:---------.:x:x.:..:....x....x:x...x...x....:x.x.x..-----...xx...:....x.----:..x..:.:.x.x:...x..xxx...:.. 20M3D9M3D28M1D36M1I14M5I14M4D29M1I28M5I30M4I35M6D13M2I13M3I39M2D24M1D54M10D35M2I22M2D10M1I92M6I15M8D15M7I15M8I18M2I7M10I56M1D14M5I11M9I42M5D15M4D29M 497/782 63.6% 853/94230402 0.0% 121/782 15.5% 129333452 60881103 +17161 chr4 + 190214555 174643719 174643718 174644078 360 CATACACACCTATGGCAGAGACACTTTCTTCTGAATTGACCATT-----TGCATTTGCATGCCCCCAGAGACTTAATCTTGCTGCTGATGAATATCCTCATGCCTAAGAATTTTATAGATAACCCAGTAGAAAATATTAAAAATCAAAAAAGCTAATGGGAAGCAGGCTCGGGAGATGGTATCAATCTTCTTGGCCCGGTCGATAAAGACCTTCCTCATTTCATCAGGACTTTTTGGCATTACCTGGACAGGGTGGTTGGGGCCCTTTGGAGTCATGCCATCCTTTGCTTGTAGACATGGTCCCATTCCATAGGCTGTGAAGCTGAATCGGCTTTCCCTTACCTCATCATCCTGTCAAAGAAAAA chr4 + 94230402 45308829 45308828 45309187 45308829 45308828 45309187 359 CACACACGTTTCTTACAGAAA----GCCTCCTG--TTGACCATGGCAGATAGATCTCCATGGACTGCAAGCATCAATCTTGTTATTGGTGAACGTCTTCATGCCTTATGATTTTGTAAATTACCCAGTAAAAAATGTTGAAAATCAGAAAGGCTAATGGGAAACAAGCTCTGGAAATTGTGTCTATCTTCTTGGCTCGGTCAATGAATACCTTTCTCATCTCATCAGGGCTTTTAGGTGCAGCTTGAGCAGGATTATTTGGCCCCTTCTGTGCCACTCCATCTTTTGCTTGCAGACATGGCCCCACTCCATATGCTGTAAAACTGAACTGACTTTCCCGTGCATCGTCATCCTGTTGCATGAAAA ..:....:::.x.x:....:.----x:..:...--........x-----.:x..:.x....xx.:xx:..xx.:.......:.::..:....::..:........x.x:.....:..:..x........:.....:..:.......:...:...........:..:....x...:..x..:..x...........:.....:..:..x.....:.....:........:.....x..:::x:.:..::....:.x:..x..x.....:x.x.:..:x.....:........:........:....:......x.....:..:.....::.:.......x.:.x..:.........::x.x:.... 21M4D8M2D9M5I316M 258/354 72.9% 359/94230402 0.0% 11/354 3.1% 129334890 60879665 +3562 chr4 + 190214555 174648324 174648323 174648424 101 CGTGGTGGTACATGCCTATAATCCCAGCTACTCGAGAGGCTGAAGCAGGAGAATCACTTGAACCCAGGACGTAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:::.....:..:.--.:..:.:.........:..:.......:x.xx.x...x.............:.xx.xx:..:..:..------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 98615127 91599428 +10375 chr4 + 190214555 174659050 174659049 174659398 349 TTACCTTATTCTTT---CTCTTTCGTCGAAATCTCAGAAGTTCTTTGTGTTGTCTTGATACAAAATTTACAGCTGCATACTCCAGAAGTGCTGAAAACACAAAAAGGAGGCATACTGCCATCCAAATATCAATAGCTTTGACATATGAAACCTAGCCAAGAGAGAA-AGAGAAAGCAAGCAAATTCACTTATA---------------TTGTTACTTCCTTTGAGAACAAAACTGAGT----TTTTCTGATTCT-GAATTATGTC---------ATTTATACATAAGTTTTAAAAAATAAAGAAAATGACAATTTTTTCTTGAAGTTTCCTTAGTTATTTTTGTAAATTTTATGTATTATGAGCATTTTGTTAATTTTTTTC chr4 + 94230402 45316517 45316516 45316894 45316517 45316516 45316894 378 TTACCTTGTTCTTCTTCCTCTTCCGTCGGAATCGCAGGAGTTCTTTATGCTGCCTTGACACAAAATTTACAGCTGCATATTCCAAAAGTGCAGAAAATACAAAGAGCAGACACACAGCCATCCAGATGTCAATTGCTTTGACATATGACACCT---TAGAAGAAAATAGAGCAGAAGACTAAATATTTTCAAAGCACAGATGTAAAGTTTAGCATTTCATGTCAGGAAGAAGCTCATTAATATCTCCAAATTCTAGCACTCTTCCGTGAAACAAATTTTCACATGAAAGTTTGATAATAAGAGAGAAAACAGTGGAATACTTAGattttaattattattttt-taaGTGTCATCTTTCACAAATGTGTTTACTATTTTTCTC .......:.....:---.....:.....:....x...:........:..:..:.....:....................:....:......x.....:.....:..x..:..:..x........:..:.....x..............x....---:.::...:..-....x.::x:.x:....x:x:.:.x.---------------..:x:.:...x.x.x..:.x:..:..x.x.----.:.:.x:.....-.x.:.x.x:.---------....x:....:.:xx..x:.x.....:::.:.x:...:.xxxx.x:.x.::...:xx.x:........-...:.x.:..x.x.:.::.:::.x..xx:x......:.. 14M3I136M3D10M1I26M15I30M4I12M1I10M9I68M1D39M 236/345 68.4% 378/94230402 0.0% 37/345 10.7% 129342533 60872022 +3121 chr4 + 190214555 174660033 174660032 174660076 44 TTTATTGTTGTGTGTGTATGTGTGTGTATATATATATACACATA chr4 + 94230402 83331405 83331404 83331448 83331405 83331404 83331448 44 TTAATCATTATGTGTGTATATGTGTATATATATATACACACATA ..x..::..:.........:.....:..........:....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 91328628 NA +3142 chr4 + 190214555 174662821 174662820 174662874 54 TTGTTTTTTTTTTTTTCTTTTTTTTTTTTTCCTGTTTGTAATGTGAACTCTTTG chr4 + 94230402 37569644 37569643 37569697 37569644 37569643 37569697 54 TTGGTTTTCTTTTTTTCTTTTTCTTTTTTCCCTGTCTGAGAGATAAGTCCTTTG ...x....:.............:......:.....:..x:.x:.:.:::..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 137093177 53121378 +14946 chr4 + 190214555 174677071 174677070 174677371 301 CACTTACTTTTGGCAAGGAAGCTCGTGATCCTGAACTCTGTGTAGTCATCGTTAGCACAGTGGTTATCCCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTCGCTCCAGATGGAATCGCACTTCTATACACGTAAACTTTCCTAATTGGTGGTAAGG--TAAATACAGCAATTAGTACAAATAGGTCTTTGT------------TACGGCATCAAATATCACAATTTCTCTTTT chr4 + 94230402 45317918 45317917 45318222 45317918 45317917 45318222 305 CACCTACCTTTGGAAGTGATGCTCGTGAGCCTGAGCTTTGTGTTGTCATGGTCAGTACAGTTGTTATGCCTAAAGCCACTCTGGCTGGAGCTGCATCCATATTGATCCAAAATGACACCCAGGAGAGAATGACTATCAAAAGACTTGGTATGTACATCTGGATGAGATAGTAACCCATCTGTCTCTCGAGGTGAAATCGGACTTCAATACATGTAAACTTTCCT-TTTTATAACAAAGAATAAATAT-----TCAATAGAAATATATCGTTATCTAAAGAGTATATACTGCATCAAATAT----ATTTCTTCTCT ...:...:.....x.:x..x........x.....:..:.....x.....x..:..:.....x.....x..:.:...:..:.....:..x...........:........:.....x........x.....:..x....::.....x..x..............x........x.....:....x...x..:..:.....x.....x.....:............-x..x:.:::..:.--......:-----.:.:..x.....x:..x..:.------------...x...........----......::.:. 224M1D13M2I7M5D21M12I15M4D11M 231/291 79.4% 305/94230402 0.0% 24/291 8.2% 129359153 60855402 +3424 chr4 + 190214555 174677139 174677138 174677271 133 CCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTCGCTCCAGATGGAATCGCA chr4 + 94230402 10740649 10740648 10740781 10740649 10740648 10740781 133 CCCAGTGCCACTCGTGCAGCAGAAGCATCGTAATTGATCCAAAAAGACACCCAGGACAGAATGGTGATGAGGATAGATGGCATGTAAGTCTGCAGGATGAAGTAACCAATGTTCCTCTTAATTCGGAAACTCA .....x..:..:.xx..x.xx.xx.....xxx:........:..x..x........:.....::::..x....x.xxx..x.....x:....x.xx.x:x....x..x..x.x:.x..:x.xx:....x.x.. 133M 84/133 63.2% 133/94230402 0.0% 0/133 0.0% 163936490 26278065 +11154 chr4 + 190214555 174682797 174682796 174682968 172 CCTACCTGTATTGTAATGTTTAGTGCAGTATCGTAAATCTTTTTCTTCTTTCAACAGAAACTGGGGCAAAGTGAGTCCTTCTGCCACTTGTACGGGTGCCTCATCTTGCCATTCAAAAATGAGATCATTCATTGTGTACCCAACTAGGCAAAACATAATAAAAATATGAATA chr4 + 94230402 45324537 45324536 45324699 45324537 45324536 45324699 163 CCTACCTGTATTGTAATGCTTAGTGCAGTAACACAAATCCTTTTCTTCTTTCAACAGAAACTGTGGCAGAGTGAGGCCTTCTGCTACTTGAACTGCTCCTTTTTCTTGCCATTCAAAAATGAGATCATTCATTGTGTATCCAACtaa---------aataaataaataaata ..................:...........x.::.....:.......................x....:......x........:.....x..x.x.x.:.:x...................................:.......:---------......x.x..:.... 147M9D16M 142/163 87.1% 163/94230402 0.0% 9/163 5.5% 129358260 60856295 +3379 chr4 + 190214555 174684869 174684868 174684951 83 CGTGGTGGTGGGCACCTCTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x.x..:.:...........::........x.xx.x...x..:.......::.:..x:xx:..:..... 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 98651672 91562883 +6257 chr4 + 190214555 174697360 174697359 174697513 154 CAAAAAGCAGAAGGAAGAAAATGCTCACTCTTGGCACATGCTGACTATTGCTAGGAGAAATATTGCTCAAGTAAATTTCATTGACCTGACAAGGAACAACTGCTATGTCAAAACGCATTTAACTAAAACATTTTTATTTATAATTTGTGCATTT chr4 + 94230402 45326379 45326378 45326532 45326379 45326378 45326532 154 CAAAAAGCAGTTGTGTGTAAAGATTAGCATTTGAAGCATGTAGATTATGGCCGGAAGTGATATCCCCTGAATAAAACTCATTGAACTGACAAGAAACAACTGCTGCGTCAAAATGTATTTCACTAAATCAAATTCGTTCATCTTTAATGCATTT ..........xx.x:x.x...x::.x:.x:...:x:....:x..:...x..::.:..x:....:x.:::.:....x:.......x........:..........::.......:.:....x......x..xx..::..:..xx..x:....... 154M 104/154 67.5% 154/94230402 0.0% 0/154 0.0% 129370981 60843574 +3078 chr4 + 190214555 174706101 174706100 174706159 59 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........:.::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 98672895 91541660 +3348 chr4 + 190214555 174712872 174712871 174712949 78 TTTGTATGTATGAGTATATATATACACACACATATATGCATATATATACACACATATGTATATATACACAGAAATGTA chr4 + 94230402 58675364 58675363 58675441 58675364 58675363 58675441 78 TTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATA .......x.:x:xx.:x..x.x......:x:x.:.................x.......::.:.:....xx....:.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 116037508 74177047 +3595 chr4 + 190214555 174712886 174712885 174712985 100 TATATATATACACACACATATATGCATATATATACACACATATGTATATATACACAGAAATGTAGGCATTTCTTAATATATGTATATATTATATAGTATA chr4 + 94230402 23247723 23247722 23247817 23247723 23247722 23247817 95 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-----TACATGAATAAATATATATATGAAATAGCCTA .:.:.:...:.........x....x.:....:..........:::.:.:.:.x:x.:...x..-----.x:x.x....x..:.......x.x....:x.. 63M5D32M 66/95 69.5% 95/94230402 0.0% 5/95 5.3% 151465163 38749392 +8001 chr4 + 190214555 174715453 174715452 174715597 145 AAAAGTATTT-TAAAA-AGTAAGTGGTTCATACTTACAGCTTTCCAGTTGCATTATACATGTTTGTACATCCATGGGAAAATTCTTGAGATCCATTGGACAGGAAAGTGTTAATGTTAATCTGAAAGTCAAAGTAATTATTTTTAAA chr4 + 94230402 45337175 45337174 45337321 45337175 45337174 45337321 147 AAAAGTATTTATAAGATAATACATCATACAAACTTACAGCTTTCCAACTGCATTATACATGTTTGCACATCCATTGGAAAATTTTTGAGATCCATTGGGCAGGACAGTATTAAAGTCAATCTGAAAGAACACAAAAATATATTAAAA ..........-...:.-.:..x:.x:.x..x...............::.................:........x........:..............:.....x...:....x..:..........xxx.x:x..x...x..x... 10M1I5M1I130M 118/145 81.4% 147/94230402 0.0% 2/145 1.4% 129378278 60836277 +3989 chr4 + 190214555 174717234 174717233 174717381 148 AAGGCATGCAGGAAGGAA-----GGGAGGGAGGGAGGGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAAAGAAAAAGAAAGAAGGAAAGAAAGAAGAAACAAAGAAACAAAGAAAGGAGGGAGGAAAGAAAGAAGGAAAGGAAGGAAGGAAAAA chr4 + 94230402 2498505 2498504 2498657 2498505 2498504 2498657 153 AAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCAAAGCAGAAAGAAATGAGAAA ...:x...x..:.:....-----.....x.:x.:x..x..x:..x.x::....x:.:...x:.x.:.x:xx:.:.x..:.:....:.:.x:.....:.:xxxx...x::........:..:....:.....x.:::x..:...:..x..:... 18M5I130M 90/148 60.8% 153/94230402 0.0% 5/148 3.4% 172218729 17995826 +3616 chr4 + 190214555 174721805 174721804 174721917 113 ATGAAAAAATATG----TGTGTGTATATATATGTGTGTGTATATGTGTGTA--TACATATGTGTGTGTATATGTGTGTGTATATATATATGTGTGTGTATGTGTGTATGTGTATATATG chr4 + 94230402 21109179 21109178 21109297 21109179 21109178 21109297 119 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG ..:.::....x..----.:::...:.:.x.x....x.:....x.:.:....--:......::x:.....:x.:.::..:.:..:x:..::x.x.......:........x:...::... 13M4I34M2I66M 73/113 64.6% 119/94230402 0.0% 6/113 5.3% 153612626 36601929 +3299 chr4 + 190214555 174721813 174721812 174721924 112 ATATGTGTGTGTATATATATGTGTGTGTATATGTGTGTATACATATGTGTGTGTATATGTGTGTGTATATATATATGTGTGTGTATGTGTGTATGTGTATATATGTGTATAT chr4 + 94230402 89812950 89812949 89813060 89812950 89812949 89813060 111 ATATGTTAGTGTTTGTG-GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT ......xx....x.:.:-:::.:.:x:..x..:........:x..x:..:x.xx...::....::x.:x:x:..::..:...x:x.......:.............x..x.. 17M1D94M 70/111 63.1% 111/94230402 0.0% 1/111 0.9% 84908863 NA +3446 chr4 + 190214555 174721823 174721822 174721886 64 GTATATATATGTGTGTGTATATGTGTGTATACATATGTGTGTGTATATGTGTGTGTATATATAT chr4 + 94230402 76709591 76709590 76709654 76709591 76709590 76709654 64 GTATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTGT ...........::.....x...:::x.:..x..:....:.......x.....x.:.....x.:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 98012232 92202323 +3351 chr4 + 190214555 174721825 174721824 174721891 67 ATATATATGTGTGTGTATATGTGTGTATACATATGTGTGTGTATATGTGTGTGTATATATATATGTG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ..:::....xx...:..:.:x..x::x..x............:............::..:....:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 147396334 42818221 +3441 chr4 + 190214555 174721836 174721835 174721903 68 TGTGTATATGTGTGTATACATATGTGTGTGTATATGTGTGTGTATATATATATGTGTGTGTATGTGTG chr4 + 94230402 86633924 86633923 86633991 86633924 86633923 86633991 68 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..x.::.::...:...x::......x...:..:...:...........:..x...:..::.x...:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 88087912 NA +3233 chr4 + 190214555 174721844 174721843 174721904 61 TGTGTGTATACATATGTGTGTGTATATGTGTGTGTATATATATATGTGTGTGTATGTGTGT chr4 + 94230402 86633930 86633929 86633990 86633930 86633929 86633990 61 TGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..:...::..x:...:...x......::..:....:......:..x...:..:..x...:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 88087914 NA +3009 chr4 + 190214555 174721858 174721857 174721919 62 TGTGTGTGTATATGTGTGTGTATATATATATGTGTGTGTATGTGTGTATGTGTATATATGTG chr4 + 94230402 27325496 27325495 27325557 27325496 27325495 27325557 62 TATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG .:..xx......:::x..x::x..x....:.................:.::...:....:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 147396362 42818193 +3081 chr4 + 190214555 174721872 174721871 174721926 55 TGTGTGTATATATATATGTGTGTGTATGTGTGTATGTGTATATATGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...:..:...:...:.::.............:.x:x::.:..::........... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 119027418 71187137 +17576 chr4 + 190214555 174728421 174728420 174728737 317 ATACACC-ATGATATTCTATTTCACTGAAATCGGCAATTTAAGTCCACGACTCACCTTATTGAATAAAGAACATTTCCATTTTTGAAAATTCTTAGCAATTTGTTGTCTGTAGTGACTTCATGAAAGTTGGCACCCTTTTCATTGGCAAAGAACAAATCAGGTTTCCAAATGGAGTCCAACATGGAGGGGTCGAGGTCTAAAGAGTCGTCAGGATATTCACTGTACGCGAGGCGGGGATCATTCCATTTCTGACGAAGAAAGATATTCACTCTGTAATCCTATGATAAAATAATGAAAGAAAGAAAAAAAAAAACCCT chr4 + 94230402 45339252 45339251 45339552 45339252 45339251 45339552 301 ATACACTTATGAACTTCTATCTCA--AAAAATCACAATTAGAA------ACTCACCTGATGGAATAAAGTACATTTCCATTTTTGAAAATTCTCAACAACTTATTATCCGTTGTAACTTCATGAAAGTTGGCACCTTTTTCATTAGCAAAGAACAAATCTGGTTTCCAAATTGAATCCAGCATGGATGGATCTAAGTCTAAAGAGTCATCTGGATATTCACTATATGCAAGACGTGGATCGTTCCAATTCTGACGGAGAAAGATGTTCACTCGGTAATCCTG---------AATGAAAGAGAAAACAAGCAAATCTTT ......:-....xx......:...--:...x:x:.....x:.:------........x..x........x.......................:.:...:..:..:..:..x..:....................:........:..............x...........x..:....:......x..:..x.:............:..x...........:..:..:..:..x.....:.....x........:........:.......x........:---------.........:.:..x..:x...x.::. 7M1I16M2D17M6D233M9D27M 246/300 82.0% 301/94230402 0.0% 18/300 6.0% 129389169 60825386 +3640 chr4 + 190214555 174732224 174732223 174732284 61 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAGACGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x......:...........::.......:x.xx.x..::.:...........:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 98699020 91515535 +3082 chr4 + 190214555 174732342 174732341 174732391 50 AGACTCCGACTCAAAAATTAAAAAAAAAAAAAAAAGGAAAAATTAACATT chr4 + 94230402 60321993 60321992 60322042 60321993 60321992 60322042 50 AGCCTCCAACTTTGAAAGTAAAAAAAAAAAAAAAAGGTAAAATTAAAGTT ..x....:...:x:...x...................x........x:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 114410349 75804206 +3218 chr4 + 190214555 174732757 174732756 174732799 43 ATTTCTCTCTCTCTCTCTCTCTATATATATATATATTTATGTG chr4 + 94230402 26955847 26955846 26955889 26955847 26955846 26955889 43 ATTTCTCTCTCTCTCCTTCTCTCTATATATACATATTTAAGTG ...............::.....x........:.......x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 147776910 42437645 +7103 chr4 + 190214555 174766907 174766906 174767063 157 TTAATGTAATTACAGATT----ACTCTAGTGTGAAACTTGTTGCAAAGTAAAATGCCT-ACCATGGTCGTCTCTGCGATAGAGCCAAAGCTGTTGATGAATATGTTGCATGTGACATTAACTGGAGGGCCTGAAAAAGAGATGAAAACATAAGGGCTGTTTA chr4 + 94230402 45356551 45356550 45356712 45356551 45356550 45356712 162 TTAACTTTATTAAATATCTTTAACTTGAACTTCAAACATTTTTTGAGATAGGGTACCTTACCATGGTTGTCTCTGCAATGGAGCCAAAGCTGTTTATAAATATGTTGCATGTGACATTAACTGGAGGACCTGCAAAAGGGGGAAAAAGAAAATCAGTGTCTA ....:x.x....x.x..:----...:x.::x.x....x.x..x::.::..:::.:...-........:........:..:..............x..:.............................:....x.....:.:x:....x.x..xx:x...:.. 18M4I36M1I103M 116/157 73.9% 162/94230402 0.0% 5/157 3.2% 129410356 60804199 +3090 chr4 + 190214555 174774348 174774347 174774431 84 ATGTATGTGTGTGTGTATGTGTGTGTGTGTGTATGTGTGTGTGTGCATGCATATGTGTGTGTTTATTTATGCTTATATGTGTGG chr4 + 94230402 85834534 85834533 85834617 85834534 85834533 85834617 84 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGG ..x:..x.....x...:.............:.xx:...:x.::.:...:::..x:.:::.......x:.::.x..:.::::... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 88939814 NA +3480 chr4 + 190214555 174774348 174774347 174774406 59 ATGTATGTGTGTGTGTATGTGTGTGTGTGTGTATGTGTGTGTGTGCATGCATATGTGTG chr4 + 94230402 5214258 5214257 5214316 5214258 5214257 5214316 59 ATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG ..x..:....:..::.x..::........:.:.x::...............x....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 169560090 20654465 +3380 chr4 + 190214555 174774351 174774350 174774425 75 TATGTGTGTGTGTATGTGTGTGTGTGTGTATGTGTGTGTGTGCATGCATATGTGTGTGTTTATTTATGCTTATAT chr4 + 94230402 85834533 85834532 85834607 85834533 85834532 85834607 75 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ...x::.x.....x...............:.:.xx:...:x....:.......:x:.::x.:.......x:.:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 88939818 NA +3113 chr4 + 190214555 174778281 174778280 174778358 78 AATGGTGGAATCT----ACCTATTATTTTCATTTTCAAAATAAAAATAACTATTTCTTTTCTTTTCTTTTTTTTTCTTTTTT chr4 + 94230402 28615111 28615110 28615189 28615111 28615110 28615189 79 AATGGAGGAAACTGTAAATCTTATACTCTAAT---CAAATTAGAAATCAATATTTCTTTTCCCTTTCTTTTTTTTTTTTTTT .....x....x..----.:..xx..:.:.x..---....x..:....x.x...........::..::........:...... 13M4I15M3D47M 58/75 77.3% 79/94230402 0.0% 7/75 9.3% 146163170 44051385 +3335 chr4 + 190214555 174784464 174784463 174784533 70 TAATTAAAAAAAAAATACAAAAAAAAAACCAAAAACACAAAGAACCCCTAATAACATCAAAACTTAGATG chr4 + 94230402 41867181 41867180 41867250 41867181 41867180 41867250 70 TATTTAAAAAAATAAAACAAAAAAACAACAAACAAAACAAACAACTATTTTTAACCTGAAAATTTAGATG ..x.........x..x.........x...x..x..x.....x...:x:.xx....x.x....:....... 70M 54/70 77.1% 70/94230402 0.0% 0/70 0.0% 132917283 57297272 +9692 chr4 + 190214555 174788810 174788809 174788969 160 AATTACCTTTAAAATTGGGTCTGATTCTTGCATCATATCCTGATGTCCTGCCCATTAATTTATCCAGAAAATCAGAAGGTGACATTGGAGCACTTCGAGATCTTGCACTGTCTGTTTCCTTTGTGGCAACCAAACTACAAATAAG--------AACAAAAATATAGAC chr4 + 94230402 45362486 45362485 45362653 45362486 45362485 45362653 168 AATTACCTTTGAAATTTGGTCTGATCCTTGCATCGTAGCCCGACATCCTACCCATTAGCTTATCCAAGAAATCAGATGGCGACATTGGCATGCTACGGGATCTTGCGCTGTCTGTTTCCTTTGTAGCTACCAAACTAAGAACAGGTGGGGAAAAACAACAACAGAAAC ..........:.....x........:........:..x..:..::....:.......::.......::........x..:........x:::..x..:........:.................:..x.........x:..:.:.--------.....x..:.x.:.. 145M8I15M 128/160 80.0% 168/94230402 0.0% 8/160 5.0% 129426324 60788231 +3586 chr4 + 190214555 174839561 174839560 174839631 71 GTGCACCTGTAACTCCAGCTACTCCAAAGGCTGAGGCACAAGAATTGCTTGAACCCAGGAGGTGGAGGTTG chr4 + 94230402 76033204 76033203 76033274 76033204 76033203 76033274 71 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ......x....::..........:x..........x.x::x...x::...........:..x.xx:..:.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 98806357 91408198 +3013 chr4 + 190214555 174845942 174845941 174846030 89 AGAAAATAAATGAGAGTTTAATTTTTTTACAAAACATTATTTCCTGGCTTGTATCCTTTACATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23738970 23738969 23739058 23738970 23738969 23739058 89 AGGAAGTAAATAGGAGTTTGTTTTTTATTCAAATGCACATTTTCTTACTCATTTACTTGAAAAATCTTTTTCCTTTTCCTTTTCTTCCT ..:..:.....::......:x.....x.x....xxxx:....:..x:..::.x.x...x.x.xx.:.....::....::....:..::. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 151106972 39107583 +3120 chr4 + 190214555 174861173 174861172 174861248 76 GATAGAGAAATCACAAGACAAAACAAACAAACAAACAACAACAAAAAAAACAAGCCAAAAATCCCTCAAGTACCTC chr4 + 94230402 7076628 7076627 7076701 7076628 7076627 7076701 74 GAAAAAGAAA--ACAAAACAAACCAATGAAACAAACAACAACAAAAAAAGCACCACAGAAACCAAACTAACACTTC ..x.:.....--....:.....x...xx.....................:..xxx..:...:.xxx.x.::..:.. 10M2D64M 55/74 74.3% 74/94230402 0.0% 2/74 2.7% 167784545 22430010 +3485 chr4 + 190214555 174889807 174889806 174889867 61 AAAAAAAAAAAAAGAACAAAAAAGAACACTACCACTACCAACTAACACTACCAATGAATTA chr4 + 94230402 33030039 33030038 33030098 33030039 33030038 33030098 60 AAAAAGTAAAAAAGAAAAAAAAAGAAAACCACCACCACCAACAAAAACTATCAG-GAATTA .....:x.........x.........x..:.....:......x..x....:..:-...... 54M1D6M 50/60 83.3% 60/94230402 0.0% 1/60 1.7% 141859768 48354787 +3069 chr4 + 190214555 174904270 174904269 174904312 43 TTTATAGTTTTTTTTTTGCTTTTTTGTTTTTTGTTTTTTGCTT chr4 + 94230402 73021707 73021706 73021749 73021707 73021706 73021749 43 TCTGTGGGTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTGCTT .:.:.:.x..........:..x..................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 101882563 88331992 +3492 chr4 + 190214555 174932148 174932147 174932247 100 GTGGTGGCACATACCCGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......-----:..x:...:.:.........:..:........x.xx.x...x..........::.:..x.xx:..:..:..------..x..x...... 6M5D71M6D12M 66/89 74.2% 89/94230402 0.0% 11/89 12.4% 98898947 91315608 +3225 chr4 + 190214555 174939738 174939737 174939981 244 AAGGATGGATTATCCAAATAAA-AGACACAATACACCTTTAGATGGAAAGAAACAAACAAGCCTGAGGCTACCAAGTTTATAGTTAAC----TGGTGGAAAAATAGCCATTTTCTCACATGAT-TATCAGAAACACAAGAC---TGATCACAAGTCAGTGTTGCAAATTTTATGA---ATACA-------------AACTTTCCTTTTTCTCCCTCTCTTCCTTCTACCCTCCCTCCCTTCCTCTCTCCTTCCTTCCTTTCCTCCCTAC chr4 + 94230402 76399114 76399113 76399378 76399114 76399113 76399378 265 AAAAATCAATTTTCCAAATAAACAAACTTAAAAAATCCCCAACCAGAACAAAAAATACCAA----AAACCAACACCTTCAGATTTCACATCTTTATGGCTATATTGTCAACTTGATGCATGATGTTTTAGCTGTGCAAATCCCTTTAATGCAAGTGGGAGTTGTACAGCTGAAGATTTACACATTGAGTTTAGAATAATATTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTGCTTTTTTTCTTTTGCCTCTAC ..::..x:...x..........-.:..x:..x.x.:.:::.:x::...x:...x.x..x.:----.::.:.x..xx..:.x.x..x..----.x:...xx.x..x.:..x:..xx::......-.x.:..xx:::...:x.---.x.x::.....x:.x....:.x.x:.x.x..---.:...-------------..:x......:x....:.......:..:..:.......x::xx.:.:x...x...::..:....:x:.:.... 22M1I38M4D23M4I31M1I17M3I31M3I5M13I73M 146/240 60.8% 265/94230402 0.0% 29/240 12.1% 98540624 91673931 +3328 chr4 + 190214555 174939738 174939737 174939981 244 AAGGATGGATTATCCAAATAAA-AGACACAATACACCTTTAGATGGAAAGAAACAAACAAGCCTGAGGCTACCAAGTTTATAGTTAAC----TGGTGGAAAAATAGCCATTTTCTCACATGAT-TATCAGAAACACAAGAC---TGATCACAAGTCAGTGTTGCAAATTTTATGA---ATACA-------------AACTTTCCTTTTTCTCCCTCTCTTCCTTCTACCCTCCCTCCCTTCCTCTCTCCTTCCTTCCTTTCCTCCCTAC chr4 + 94230402 76394294 76394293 76394558 76394294 76394293 76394558 265 AAAAATCAATTTTCCAAATAAATAAACTTAAAAAATCCCCAACCAGAACAAAAAATACCAA----AAACCAACACCTTCAGATTTCACATCTTTATGGCTATATTGTCAACTTGATGCATGATGTTTTAGCTGTGCAAATCCCTTTAATGCAAGTGGGAGTTGTACAGCTGAAGATTTACACATTGAGTTTAGAATAATATTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTCCTTTTTTTCTTTTGCCTCTGC ..::..x:...x..........-.:..x:..x.x.:.:::.:x::...x:...x.x..x.:----.::.:.x..xx..:.x.x..x..----.x:...xx.x..x.:..x:..xx::......-.x.:..xx:::...:x.---.x.x::.....x:.x....:.x.x:.x.x..---.:...-------------..:x......:x....:.......:..:..:.......x::xx.:.:x.......::..:....:x:.:..:. 22M1I38M4D23M4I31M1I17M3I31M3I5M13I73M 146/240 60.8% 265/94230402 0.0% 29/240 12.1% 98545444 91669111 +3049 chr4 + 190214555 174953157 174953156 174953215 59 GTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.x......:...........::........x.xx.x...xx:.x.........:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 98919951 91294604 +3472 chr4 + 190214555 174968134 174968133 174968199 66 CCATGAGCTAGATCTGAATTTTGTTTAGCTTTTTCTTTTGAGTTAAAATATACATACAATGAATTA chr4 + 94230402 26068193 26068192 26068258 26068193 26068192 26068258 66 CCTTGAGCTACTTCTAAATTTTGTAAAGCTTTATATTTTTAACTAAAATGTGCATACAATACATTA ..x.......xx...:........xx......x.x....x.::......:.:........:x.... 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 148899941 41314614 +3203 chr4 + 190214555 175001695 175001694 175001769 75 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGAAAGGGTCTTGCTCTGTTACCCAGGCTG chr4 + 94230402 6857611 6857610 6857685 6857611 6857610 6857685 75 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCTAGTCTG .:.:.::..:::.::..:.:x:.........x............x:....x::.:..x:...x...:.:..x... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 168144084 22070471 +3006 chr4 + 190214555 175019277 175019276 175019332 56 GAAAGGAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAGAAAA chr4 + 94230402 74345161 74345160 74345216 74345161 74345160 74345216 56 GAAGAGAACGGGAGAAAGGGAAAAAAAAAAGAAAAGAGAATTAAAACGAAAGAAAA ...::...x.::.......:..:...:..........:.:xx.:..x..:...... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 100674116 89540439 +3045 chr4 + 190214555 175095933 175095932 175095980 48 TTGATATTACCAGAAGAAAAAAACAAGCAAACAAACAAAAGACAGAAA chr4 + 94230402 22620547 22620546 22620594 22620547 22620546 22620594 48 TTGATATTGTCTAAAGGAAAAAACAAACAAACAAACAAGAAACAACAA ........::.x:...:.........:...........:.:...:x.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 152475386 37739169 +4034 chr4 + 190214555 175103327 175103326 175103462 136 AGAAGAAGAAGGAGGAGGAGAGGAAGGAGGAGA-------AGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAG--GAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGA-GGAGGGAGAAGGG chr4 + 94230402 890630 890629 890775 890630 890629 890775 146 AGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGG ..x.:.:.:.x.xx.:....:..:xx.:..x:.-------.....:..x:....:...:..::.:x:.:...:..:..--..x......::.....x.x......:.:xx...:.x..x:.:....:.x...-..:.....xx... 33M7I38M2I52M1I13M 89/136 65.4% 146/94230402 0.0% 10/136 7.4% 174212697 16001858 +3724 chr4 + 190214555 175103330 175103329 175103445 116 AGAAGAAGGAGGAGGAGAGGAAGGAGGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGG chr4 + 94230402 890670 890669 890775 890670 890669 890775 106 AGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGA----------GCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGGGAGCCGGG ...:.::.x..::.:.....:...:x:::.:..:..:.x...x......::....----------.x.x........:xx.....x..x.......:.x.:.x..:.:.:.xx... 55M10D51M 70/106 66.0% 106/94230402 0.0% 10/106 9.4% 174212660 16001895 +3337 chr4 + 190214555 175103353 175103352 175103473 121 GAGGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGG chr4 + 94230402 58171810 58171809 58171928 58171810 58171809 58171928 119 GAAGATGGGAGCAGAAGAAGGGAGAAGGAAGAAAAGGTGACATGTCTGGTGGAAAGGAGAGGGAAAGGTACAAGGCTAAGGAATA--TGAGCTAGGAGTGGTGAGAGGCTAAAGGGGAAAG ..:..x::...x..:..:..........:...:::.:x.:x:x:xxx..x:...:........:.:..x:x.:..xx....:.x.--x...xx.....x:.x....:.xx.:......::. 85M2D34M 73/119 61.3% 119/94230402 0.0% 2/119 1.7% 116931543 73283012 +3665 chr4 + 190214555 175103373 175103372 175103480 108 GGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGG chr4 + 94230402 28130519 28130518 28130626 28130519 28130518 28130626 108 GGAGAAGAGAGAGACCACAAAGAGAGAGGGCGTGGTGAGTGGAGATGGTGGAGGGAGATGGAAAAAGGGTGCATGGGGAACACAAAGGAGAGTAGGGGTGTAGGATGG .......:.....:xx.x::..:::.....x.x:.x...x..:..x..x.........x..:.:.:...x.x:x..:.:.x:x.:.:.:...x:...:x.x....x.. 108M 68/108 63.0% 108/94230402 0.0% 0/108 0.0% 146972854 43241701 +4017 chr4 + 190214555 175103375 175103374 175103508 134 AGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAG-----GGAGAGGGGAGGGAGGAGGGAGAAGGG-AGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGG chr4 + 94230402 890630 890629 890767 890630 890629 890767 138 AGCAAAGGGATGCTGGGGAGGGGGTTGGGGTAACCTGCAGAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAG--AAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGAGAGTGGATGGGGG ..x.::.:..x.xx:......:..xx..:.x.:-----:........:x:.....:.::.:....-...:..:..--.:.x...x......::.....x.x......:.:xx...:.x..x:.:....:.x:..x.:... 33M5I27M1I9M2D63M 87/132 65.9% 138/94230402 0.0% 8/132 6.1% 174212745 16001810 +3177 chr4 + 190214555 175103380 175103379 175103487 108 GGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGG chr4 + 94230402 28130519 28130518 28130626 28130519 28130518 28130626 108 GGAGAAGAGAGAGACCACAAAGAGAGAGGGCGTGGTGAGTGGAGATGGTGGAGGGAGATGGAAAAAGGGTGCATGGGGAACACAAAGGAGAGTAGGGGTGTAGGATGG .....:.:...:..xx.x:.:.::::....x.x..x...x.::..x..x.:.......x..:.::::..x.x.x..:...x:x.:...:...x::..:x.x..:.x.. 108M 64/108 59.3% 108/94230402 0.0% 0/108 0.0% 146972861 43241694 +4320 chr4 + 190214555 175103398 175103397 175103588 191 GAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGGAGAAATGAGTAGGGAGAAGGGAGGAGT----GGGAGGGGGAGGGGAGGGGGAAGGAGAGAAGGAGAAGGAGAAAGAAGAAAGAA chr4 + 94230402 2498466 2498465 2498656 2498466 2498465 2498656 191 GAGTGAGGGGGGTGAGGCGGGTGCGGGGATGGATGTATTAAGAGATGGAGAAGGGAACAATGGGGAGTGGTGATGGCAGCAAGCGCAGGAGACGGGGAGTAATAAACGCTGAGATAAGGGAGGAGAAATGGAAGAGATCTCCAAAGGGAGAAAGGAAGGGGGAAGGAAAGCA----AAGCAGAAAGAAATGAGAA ...x...::...x....x.:.x.x..:.:x:..x.x:xx.:.:..x....:...:::x.:x:.....x..x..x..x:.x::.x.x...:::x......x:.x:.:x:xx....x.x.:.x:.:..:.x..:..:::.----::::..:.:.:..:...........:..x.----...x........:x:.... 138M4I30M4D19M 110/187 58.8% 191/94230402 0.0% 8/187 4.3% 172604932 17609623 +3339 chr4 + 190214555 175103426 175103425 175103570 145 GGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGGAGAAATGAGTAGGGAGAAGGGAGGAGTGGGAGGGGGAGGGGAGGGGGAAGGAGAGAAGGAGA chr4 + 94230402 28130519 28130518 28130663 28130519 28130518 28130663 145 GGAGAAGAGAGAGACCACAAAGAGAGAGGGCGTGGTGAGTGGAGATGGTGGAGGGAGATGGAAAAAGGGTGCATGGGGAACACAAAGGAGAGTAGGGGTGTAGGATGGCTGCCAAATGAAAAAATGGCAGAAGTTCAAGAGCAGA .......:.....:xx.x::..:::.....x.x:.x...x..:..x..x.........x..:.:.:...x.x:x:.:.:.x:x.:.::x........:x:x:...x.:x..xx.::x.:.::::x..x:....xxx.::..x... 145M 82/145 56.6% 145/94230402 0.0% 0/145 0.0% 146972907 43241648 +3222 chr4 + 190214555 175103457 175103456 175103561 105 GAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGGAGAAATGAGTAGGGAGAAGGGAGGAGTGGGAGGGGGAGGGGAGGGGGAAGGAG chr4 + 94230402 18004787 18004786 18004890 18004787 18004786 18004890 104 GAAGGTGCAGAATAGGTAAGAATGGGAAGACAAAGGAGCTGGCACAGTAAGTCAAGATTAGTATGGAAACTGGGGGAGGGGGAGGGGG-GGGAAGAAAGAAAAAG .....x:x..::x...x.:..:x.:....:x.:...:.xx..x.x..x.:.xx:.:..x....x...:.xx..:....x.........-...:..:::...::.. 88M1D16M 66/104 63.5% 104/94230402 0.0% 1/104 1.0% 157098670 33115885 +3335 chr4 + 190214555 175133830 175133829 175133910 81 CATGGTGACACACCTGTAGTGCTAGCTACCAAGGAGGCTGAGGCCAGAGGATTGCTTGAGCCCAGGAGGACAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:::...x......x.:......:x:::........x..x.x.:.x::.....:.....:..xx:x:.....:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 99100633 91113922 +3112 chr4 + 190214555 175140419 175140418 175140489 71 TTCCTTATTTTCTTAATTCTTTCCTATATTTTCATTGAGTTTAATCTGAAGTTTTTTTTGTTTGGTTGGTT chr4 + 94230402 77145750 77145749 77145820 77145750 77145749 77145820 71 TTTCTTTTCTTTCCATTTTTTTCCCCCATTTTGATTTTTTTAGCTTTGAGGGTTTTTTTGTTTGGTTGGTT ..:...x.:..:::.x..:.....:x:.....x...xxx..x:x.:...:.x................... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 97994669 92219886 +3008 chr4 + 190214555 175151100 175151099 175151160 61 GAACACCTCTCTGAAGTATAGCAAGTAACTACTAAAAGTTAAAAATAAAAACAAAACAAAA chr4 + 94230402 53882170 53882169 53882230 53882170 53882169 53882230 61 GAACATTTCACTGAAGTTTTGGAATGAAATATTTAAAGTGAGAAACAAAAATAAAACAAAA .....::..x.......x.x.x..xx..x..:.x.....x.:...:.....:......... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 121268930 68945625 +3064 chr4 + 190214555 175160091 175160090 175160145 55 AAAGACAGCTTTGCAGGGCCATTTCAAAATATTTCAAAGAAATATATTTTGGGCT chr4 + 94230402 49754278 49754277 49754332 49754278 49754277 49754332 55 AAAGGCAGCTTTGCAGAGCTTTTTCAAAATATTTTAAATGGGGAAATCCTGGACT ....:...........:..:x.............:...x:::x.x..::...:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 125405813 64808742 +3332 chr4 + 190214555 175165222 175165221 175165273 52 TATATATATATATATATGTGTATATATATATAAAATATATATATATATGTTT chr4 + 94230402 15348794 15348793 15348845 15348794 15348793 15348845 52 TATACATATATATATTTGTGTATGTATATATTAATTATCTACAAATATGTTT ....:..........x.......:.......x..x...x..:.x........ 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 159816428 30398127 +3076 chr4 + 190214555 175167186 175167185 175167255 70 TGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATAGCTTGAAGCCAGGAGGTGGAGGTTG chr4 + 94230402 76033205 76033204 76033274 76033205 76033204 76033274 70 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG .....x....:.:.........::::........x.xx.x...xx:......x....:..x.xx:..:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 99133981 91080574 +3017 chr4 + 190214555 175224898 175224897 175224944 47 TGTGGGTGTATATATATATGTATATACACACACACACACATACATAT chr4 + 94230402 4409076 4409075 4409122 4409076 4409075 4409122 47 TGAGGCTGTACATATATATATATATACACACACAGAGACACACACAT ..x..x....:........:..............x.x...:...:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 170815822 19398733 +3300 chr4 + 190214555 175259175 175259174 175259244 70 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATAGTTTCTATA chr4 + 94230402 4618347 4618346 4618416 4618347 4618346 4618416 70 CTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATA ..:...:x:x.::.x.......::..............::x...::......x.x........x.xx... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 170640828 19573727 +3098 chr4 + 190214555 175259181 175259180 175259236 56 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATAG chr4 + 94230402 4618357 4618356 4618413 4618357 4618356 4618413 57 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAG .::.x.......::..............x:....::......x.x......-..... 51M1I5M 45/56 80.4% 57/94230402 0.0% 1/56 1.8% 170640824 19573731 +3295 chr4 + 190214555 175284711 175284710 175284776 66 CTCTATGTAG-ATACATTTT-CTTTTCTTTTTCCTTTTCTTTTCTTCCTTTTTCTGTGAGACAGAGTC chr4 + 94230402 32717243 32717242 32717310 32717243 32717242 32717310 68 CTCTATAAAGCACACATTTTGCTTTTTTTTTTTTTTTCCTTTTCTCTCTCTCTCCGTGAGAAACAGTC ......:x..-.:.......-.....:.....::...:.......::..:.:..:......x.x.... 10M1I9M1I47M 52/66 78.8% 68/94230402 0.0% 2/66 3.0% 142567468 47647087 +3148 chr4 + 190214555 175303131 175303130 175303205 75 GCGACTGAGCGAGACTGCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAGCAGATCC chr4 + 94230402 88382708 88382707 88382782 88382708 88382707 88382782 75 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATAACCACACAGCTCC ..:.xx....:....x..x...x.....::.:..............:x.x.:..:x.x..x..x..x:...x... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 86920423 NA +3426 chr4 + 190214555 175303151 175303150 175303208 58 CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAGCAGATCCATT chr4 + 94230402 10137926 10137925 10137983 10137926 10137925 10137983 58 CCAGAAAAAAAAGAAAAAAAGAAAGAAAATAGACAAATTAAATGCAAGCAGATTCATT .:.:........:.......:...:....x.:.x...xx...x..........:.... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 165165225 25049330 +3030 chr4 + 190214555 175309061 175309060 175309121 61 CCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTCCTTTTTTTTTCTAGAGACAAGGTC chr4 + 94230402 68431722 68431721 68431782 68431722 68431721 68431782 61 CTTTCTCCTCCTTTTTATTATTCTCCTCCTTTTTTTTTTTTTTTTTCCAAATGTCAGGATC .:....:..:...:..x..x....:......:..:.::........:.x.:x.x..:.:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 106877339 83337216 +4121 chr4 + 190214555 175329210 175329209 175329292 83 CATGGTGGTGCACGACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--....:.:...........::........x.xx.x...x...........x.:..x.xx:..:..:.. 14M2D67M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 99296013 90918542 +3150 chr4 + 190214555 175347193 175347192 175347308 116 GCAGTGAGCCGAGATCACCCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTTTATCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAGAAAAGAAAATGCTCAAA chr4 + 94230402 1317352 1317351 1317456 1317352 1317351 1317456 105 GCAGAGAGCAGAGAG---------GCACACAAGCTAAGG--ATGGAGAAAGACTTTAAAATAGCAGAATAAGATCAGAGGAAGAAGGAAAAGGAAAGAGAAAAGAAATAGCCAAAA ....x....x....x---------....x.x...:x:..--.::...x:........xxx:.:x.:..x..:.xx.:.::.....:......:...:..........xx..:x... 15M9D15M2D75M 72/105 68.6% 105/94230402 0.0% 11/105 10.5% 174029841 16184714 +3694 chr4 + 190214555 175356214 175356213 175356287 74 GTGCACCTGTAATTCCAGCTATTTGGGAGGCTGAGGCAGAGGAATCAATTGAACCCAGGAGACGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.........:...::........x.xx:x...x..x..........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 99323010 90891545 +3300 chr4 + 190214555 175384677 175384676 175384730 54 AAAGAGAAGAGAAGAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAGAAAAGAAGG chr4 + 94230402 3574035 3574034 3574088 3574035 3574034 3574088 54 AAAGAGGGGGGGTGGGGAAAGAAAAGGAAAAAGGAATGAAAAAATAAAAGAAGG ......::.:.:x.:.:.........:......:..x.....:.x......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 171810642 18403913 +3157 chr4 + 190214555 175386721 175386720 175386788 68 AGAGAGAAACTCCGTCTCAAAAAAAAAAAGAAAATAAAAACAACAACAACAAAAACAAACAAACTGCT chr4 + 94230402 4563790 4563789 4563857 4563790 4563789 4563857 68 AGAAAAAAATTGTTTTCTAACAAAAAAAAAAAAATACAAACAGCAACAACAACAAAAAAAAATCAACT ...:.:...:.x:x.:::..x........:......x.....:.........x..x...x..x.x:.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 170822931 19391624 +3018 chr4 + 190214555 175387985 175387984 175388033 49 CATTGAAAGAAAAACAAACAAAGCAACAACAGCAACATCAACAATAAAG chr4 + 94230402 81964190 81964189 81964238 81964190 81964189 81964238 49 CATTAAAAAAAAATCAAACAAAACAACAACAACAACAAAAACCCTAAAG ....:...:....x........:........:.....xx...xx..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 93423795 NA +3809 chr4 + 190214555 175404036 175404035 175404118 83 CGTAGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCACTTGAACCTGGGAGGTGGAGCTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::..........:--......:.........::::........x.x..x...x..........::.:..x.xx:.x:...:. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 99370839 90843716 +3822 chr4 + 190214555 175433732 175433731 175433810 79 GTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCACTTGAACCCAGGAGGCTGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::....--....:.:...........::........x.xx.xx..x.............:..x:.x:..:..:.. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 99400531 90814024 +3518 chr4 + 190214555 175434502 175434501 175434577 76 ATATAAATAAATATATATTTAAATATATATAAATATATATTTAAATATATAAATATAAATATTTATTTATATTTTT chr4 + 94230402 42692596 42692595 42692671 42692596 42692595 42692671 76 ACAGAAATAAATTTATACTGAAATATATATAAACGGACACAGAAATACATACATCTATATGTTTAATTATGTTATT .:.x........x....:.x.............::x.:.:xx.....:...x..x..x..:....x....:..x.. 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 132741906 57472649 +4684 chr4 + 190214555 175434688 175434687 175434870 183 ATATAAATATATATTTATATATATAAATATATATTTATATATTTAAATATATA--TTTAT-ATATATAAATATATATTTATATATA-----TAAATATAAATATATATTTAAATATATAAATATAAATATATATTTAAATAT-----ATAAATGTAAATATAAATATATATTTAAATATATATTTAAATATATAAA chr4 + 94230402 29810923 29810922 29811111 29810923 29810922 29811111 189 ATGTATATATATACTTCAATATATAAGTATGTATGTCTATACTTCAATATATAACTTTATCATAAACTAGTAAGtattaaagtataatttttaaataaaaat-tGCATTTAAA---ATAGATACATTTTTTCTATTAAATGTGTCCAATTAATACAATCAAAAATATATATTTCTAC---TATGGAAACCTATAAA ..:..x.......:..xx........:...:...x.x....:..x........--.....-...x.:x.:..x:....x.x:....-----......x....-.::.......---...:...:.xx.x.x:xx......:.-----..x...::..x:.x............xx.:---...xx...:x...... 53M2I5M1I25M5I11M1D10M3D26M5I30M3D16M 130/176 73.9% 189/94230402 0.0% 20/176 11.4% 145623765 44590790 +3196 chr4 + 190214555 175435034 175435033 175435115 82 ATATATACATATATAAATATAAATATATATTTAAATATATACATATATAAATATAAATATATATTTAAATATATATAAATAT chr4 + 94230402 42692584 42692583 42692665 42692584 42692583 42692665 82 ATATACCCATCTACAGAAATAAATTTATACTGAAATATATATAAACGGACACAGAAATACATACATCTATATGTTTAATTAT .....:x...x..:.:.x......x....:.x.........:.x.::x.x.:.x.....:...:x.xx....:.x...x... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 132742450 57472105 +3118 chr4 + 190214555 175435216 175435215 175435274 59 ATATATAAATATATTTAAATATATAAATATAAATGTACTTATATATATTTAAATATATA chr4 + 94230402 56938584 56938583 56938642 56938584 56938583 56938642 59 ACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA .:.:...:.......x.......x.x:x...x...:x:......:....:......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 118496632 71717923 +3207 chr4 + 190214555 175441737 175441736 175441837 101 CGTAGTGGCACACACCTGTAATCCCAGCTACTTGGGATGCTGAGGCAGGAGAATCGCTTGAACTTGGGAGGCAGAGGTTGCAGTGAGGCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.....::...:--....:.:...........::.x......x.xx.x...x.:.......:::.:..x:xx:..:..:..------..x..x...... 14M2D67M6D12M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% 99408540 90806015 +3096 chr4 + 190214555 175473458 175473457 175473527 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 99440261 90774294 +3470 chr4 + 190214555 175487042 175487041 175487133 92 GTGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::.x....:.:.........::.:........x.xx.x...x::...........:..x:xx:..:..:..------:.x...:..... 74M6D12M 60/86 69.8% 86/94230402 0.0% 6/86 7.0% 99453838 90760717 +3490 chr4 + 190214555 175490371 175490370 175490480 110 CATGGTGGTGCACATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATTGCTTGAACCTGGAAGGCAGAGGTTGCAGTGAGACGAGATCACGCCATTGTGCTCC chr4 + 94230402 76033197 76033196 76033303 76033197 76033196 76033303 107 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCC ..::.........:.--...:.:...........::........x.xx.xx..x::........::....x:xx:..:..:..-:.x.:..x::..x..x:x....:x.. 15M2D66M1D26M 71/107 66.4% 107/94230402 0.0% 3/107 2.8% 99457174 90757381 +3257 chr4 + 190214555 175516597 175516596 175516679 83 CATGGTGGTGTGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGTGGAAGGATGGCTTGTACCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::..--......:.........x.::........x:xx:x.:.xx:....x......:..x.:x:.....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 99483400 90731155 +3716 chr4 + 190214555 175560291 175560290 175560419 129 AAGGAAAGGAAAGGTAAAAGGAAGTAAAGAAATAAGGAAAGGAAGAAAATAAAGGAGAAACAAAGGAGAGAAAGGAAACAAAGAAATAAAGAGTGAGAAAGAAGAAAGGAAGAAAGAAAGAAAGAAACA chr4 + 94230402 81202751 81202750 81202875 81202751 81202750 81202875 125 AAGGAAAGGAAGAGTAAAAGCAAGTCAAGCTGGGGGTCAAGATAAAAATCATTTAATAAACAAAGGAGAAGCAGAAGAGAGGAAAAAAAA----AAAAAAAAACAAAGGaagtgatgcaaaaacaatca ...........::.......x....x...xx:x::.xx...:x.:...x:.xxx:.x............::x..:.:.x.:::...x...----:.:...:..x........x:.x:x.:...x..x.. 90M4D35M 81/125 64.8% 125/94230402 0.0% 4/125 3.2% 94357540 NA +4600 chr4 + 190214555 175560335 175560334 175560530 196 GAAAATAAAGGAGAAACAAAGGAGAGAAAGGAAACAAAGAAATAAAGAGTGAGAAAGAAGAAAGGAAGAAAGAAAGAAAGAAACAAAGAGTAAGAAAGAAGAAAGAATAAAAAAGAGAGGAAGGAAGGA--AGGGGGA-----------GGGAGGGAGGGAAAAGAAAAGAAAGAAG-AAAGAAAGAAAGAACAAAA--AGAAAGAAAGAAA chr4 + 94230402 65771126 65771125 65771337 65771126 65771125 65771337 212 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAAAA .....x::x:...:....::.x.:.x....:x.:x..x:xx.x:x..:.:x..x.....:x.xxxx....::xx::::.:...x.:...:...:.:...::....x.:.....xx.......:....:.--..:.x..-----------:.....:.....:.::.x...x...:..-.x......x..x..:...:--..x..:...:... 129M2I7M11I28M1I19M2I13M 124/196 63.3% 212/94230402 0.0% 16/196 8.2% 109789209 80425346 +3239 chr4 + 190214555 175560411 175560410 175560492 82 AAAGAAACAAAGAGTAAGAAAGAAGAAAGAATAAAAAAGAGAGGAAGGAAGGAAGGGGGAGGGAGGGAGGGAAAAGAAAAGA chr4 + 94230402 10675398 10675397 10675475 10675398 10675397 10675475 78 AGGGGAACCAACAATTACAAATTGGGAAGAA---GAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGG-GGGAGAAGAAATGA .::.:...x..x.:.x.x...xx:.:.....---:.:...:.....:......:........x....-....:......x.. 31M3D33M1D14M 58/78 74.4% 78/94230402 0.0% 4/78 5.1% 164885013 25329542 +3194 chr4 + 190214555 175560444 175560443 175560492 49 AAAAAGAGAGGAAGGAAGGAAGGGGGAGGGAGGGAGGGAAAAGAAAAGA chr4 + 94230402 10675424 10675423 10675472 10675424 10675423 10675472 49 AAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAA ..:.......:......:.....:..:......x....:::....:.:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 164885020 25329535 +3394 chr4 + 190214555 175560456 175560455 175560508 53 AGGAAGGAAGGGGGAGGGAGGGAGGGAAAAGAAAAGAAAGAAGAAAGAAAGAA chr4 + 94230402 59767335 59767334 59767387 59767335 59767334 59767387 53 AGGAGTGGGGGGGGGGGGGGGATGAGAAAAGAAAAGAAAAAAGAAATAAAGAA ....:x.::.....:...:..:x.:..............:......x...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 115793121 74421434 +3070 chr4 + 190214555 175560460 175560459 175560506 47 AGGAAGGGGGAGGGAGGGAGGGAAAAGAAAAGAAAGAAGAAAGAAAG chr4 + 94230402 44840878 44840877 44840924 44840878 44840877 44840924 47 AAAAGGGGGGGGGGGGGGAAGGAAAAAAAAAAAAGGAAAAAAAAAAG .::.:.....:...:....:......:....:..:...:...:.... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 130719582 59494973 +3026 chr4 + 190214555 175560462 175560461 175560512 51 GAAGGGGGAGGGAGGGAGGGAAAAGAAAAGAAA-GAAGAAAGAAAGAAAGAA chr4 + 94230402 59767336 59767335 59767387 59767336 59767335 59767387 52 GGAGTGGGGGGGGGGGGGGGATGAGAAAAGAAAAGAAAAAAGAAATAAAGAA .:..x...:...:...:....x:..........-...:.......x...... 33M1I18M 42/51 82.4% 52/94230402 0.0% 1/51 2.0% 115793126 74421429 +3019 chr4 + 190214555 175560524 175560523 175560573 50 AAAGAAAGAAAGAAAAGAGAAAGAAAGAGAGAGAGAGACAGAAACATAAG chr4 + 94230402 66158980 66158979 66159029 66158980 66158979 66159029 50 AAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAGG ..:....:............:...:....::.:x...:......:.x.:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 109401544 80813011 +3056 chr4 + 190214555 175590915 175590914 175590960 46 AGGTACACACACACACACACACACACACACACACTTCATATATAAA chr4 + 94230402 84895802 84895801 84895847 84895802 84895801 84895847 46 AGATATACAGGCATACACACACACACACACACAGTTCCTATATAGA ..:..:...x:..:...................x...x......:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 90695113 NA +3479 chr4 + 190214555 175625997 175625996 175626144 148 CTGGGACAGAGCAAGACTCTGCCTAGAAAAACAGACGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAA----AGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA---------GAAGAAAGAAAGAAAGAA chr4 + 94230402 51148343 51148342 51148502 51148343 51148342 51148502 160 CTGGGAGAGCACGGGGCTGTGGC---AAATGGCGTTTACAGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ......x..x:.::.:..x..x.---...x:xx.x:x.x........::..xx.x...........:...:...:.x....----....--::..x.:..x.x:..::.x:...:.:...:..:....:::..::.---------....x.x...:...:.:. 23M3D55M4I4M2I45M9I18M 95/145 65.5% 160/94230402 0.0% 18/145 12.4% 124477654 65736901 +3250 chr4 + 190214555 175626033 175626032 175626138 106 GAAAGAAAGAAAGAGAGAGAGAGAGAGAGAAAGAGAGAGAG----------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--------AAGAAAGAAGAAAGAAAG chr4 + 94230402 51148380 51148379 51148503 51148380 51148379 51148503 124 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .......::.:xx.x...................:.x...:----------::..x.:..x.x:..::.x:...:.:...:..:....:::..::.x.--------...x.x....:...::.. 41M10I47M8I18M 71/106 67.0% 124/94230402 0.0% 18/106 17.0% 124477653 65736902 +3080 chr4 + 190214555 175626059 175626058 175626180 122 GAGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--------AAGAAAGAAAGAAAGAAAGAAGAAAGAAAGA-------------AAGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAA chr4 + 94230402 24350554 24350553 24350697 24350554 24350553 24350697 144 GAGAAAAAAAGGGGGGGTAAGGGGGGAAGGTTTAAATGAAGTATTAATAACCACATTAAAAAAAGAAAGAAAGAAAAAATTAAGATGGATCCCAAACTAGTTCAGAAGAAAAGAATGATAAATGGCAGTACAAAAAAGAAAGAA ......:.:..:.:.:.x...:::.:...:xxx...x:...x.xx..x:.--------..:...............:..xx....x:..-------------x....::......x..x.:.x:.x.:x.-..:.......... 50M8I31M13I28M1I13M 83/122 68.0% 144/94230402 0.0% 22/122 18.0% 151275505 38939050 +3126 chr4 + 190214555 175626074 175626073 175626155 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x.............x:x.:::..x....:.:..x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 134513896 55700659 +3164 chr4 + 190214555 175626121 175626120 175626204 84 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAAGAGCAGATAT chr4 + 94230402 41112178 41112177 41112262 41112178 41112177 41112262 85 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAATAT .:.....:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....-.:.::..:::.:.... 68M1I16M 58/84 69.0% 85/94230402 0.0% 1/84 1.2% 134513943 55700612 +3470 chr4 + 190214555 175626778 175626777 175626850 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTTAGCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x...x.....x.:.....:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 99593573 90620982 +97847 chr4 + 190214555 175632908 175632907 175635071 2164 AAGAAAAAAAACAGATACACTGCAGAAGCTAATAATAAGTACACAAAGTACACAAGTGTATTTATTACATTTT-GCAAGCACTCTGTTCTACATTTCAAAAACGCCACCATCAAGCTGTTGGCACATTTATGTACAAAACAGATTAATTGTAATGCCTGCTACAAAGCA--CTCTGTGAAAATACAAACTCTAATACCAGAAATAAAAGCCAAAAGTGTCAACATCATTACATAAGTTGAAAAGAC--AGTTTTAGAAATTATCACAAAC-TGTTAAGACACGGAACTGAAATACTATAATATAGAATTTAAAGAAGCCCATTAATACTTTTGCTGAATATCTGTAA------TACTGCATA-TATCAGAAAAATGTTGAACCAGTAAGATAATCTAAGCAT-------------------AAAGAAAAGGAAGCAAAAT--------------------------------------GAACCCCA----------------------------------------------AATTAATTAAATAATACTACGGAATGCATAATCATGC--CACAGATATCCCTAGTAGTACCCCCTACCTACTACAAGAACTTGT-AAAATTACTGATGATGCATGACTAGTCATTGTACAAAG-ATTGTTTCACTCAATAAATTTTTATTAGAAATGCAGTTACACTGAGAAAGGATTTCACAATGGTCAAATCAGTGCACAATACTACCT-AGTTTTATACACTGAAAAAAATGTCTTGTCAGGCTACATCATTTTAGAAGACACTTTACAGCATTCTTGTAGCATTAGAAATAATGAAAAGAAGAGCGTCAAGGTGAAAACAAACACCAAATTTGGTCCAATAATACTGATTGCTCTTTGTTAAAATTCC----------------------------------TTTGATACAGGTACTTTTTATAAATGAATATGAATGAACATTCGGTTAAAATGACTTACTTGAAATAAAAACACAAATATATCACTACACTTTCAAACAATACATTCTATAGGGGCCTCTGACCACACTTTATAAAACACTACAGGTAAACCAACATAGATTGGAAGGCTGCAAGCAAAGCTATTATATTAATGGAAGCCTTTTCAAATATATCATACACATTTTAGGAATAGTTTACAGAGGTGCAATCCATTAAAACTTTTAAAGTAGGTAAAACAACTTCCGA-----GGGGTTAGTGTGCTTATTTGTAATAAACCACCTTCATAAAGGTA-------ATTAATTTTCCACATTAGCATATTAAAAGTTCCAATCCAGC----CACTTCTTAAATCACAAAGAGATCATTCTTCAATAGTCTACAG-TAGTTATTTCCATTAA-----AATTGTCTCTATATACTAAA-CTTTAAAAGGTAAGCCTGGTGTCACAAT-CTTAAAAAGGCAACTAGCCATGCA---TTAGCATTACTGTTTCTACATGCTCACAACATAAACATGAGTAATC-----TG-----------AGGGAAATACCTTTTAAGAACATCAAGGAAAAGTACAATGTTAACAAAGATAAGAAGCAC--------------------------------------------------------TTTTTTTTTTAAACCTACTCTTACAAATTTAGAAATTGCACCTTAGATTGATGAAAACATGAACCAGGGCCTACAGTAATATGGCCACTGATCT-TCAGACAAAATTTCCATATTTCAAG---AGTCATCAAGATGTAATCTCTATCTATTGTTCATAATGTACAATGGTCCCTTTGAAGGTTACCTGTAGTTAAACTAGTTACCGAAATCAAAACTAAAAAGTATAAAAAGCTATTTTCTTTTCAAA---ACATAAGAAATAATGCAAAAGGTGTTATGTATAACACATGGGAAGTGGTT--AAAAATCAAACAAATCTTTGCATTTGACAATG--TTAGTATCTTTGATTTTACAGAACTAGTAAATGAGTTTGAGAAATTTCAAAAAAAAGGCTGGATAGGAGCTT----GTAGAAAAGATCTGATTTACATCAATTTAATAAATTGGGAAATTTAAGTGCTAAACAACAAAGAATTGTACTCAGGTGATTCATAAGTCACCTTACATATCATTGATGAGAAGCACTTTCGTTTTGTTTTTTAAAGGTTGGATGGTTGGATGGCCCTTAGTTAAACACCAATGCATTCAAATGGTAGAAAG-AACAGGAAGATGCATTTATGTGTATGCATTGAGCCGCTCTTTGGAGCGAGTAGAGTGGATGTCATGAAGCTCTTGCTCTTCCTTCGACTTGATGTCTTCATACTTCTGCATCCGGCAGGCGTCTTTCACATAGGCCCAGTTGGCAGACAGAACCATAAGGTAGTGAACCTAATCAAAGAGAA chr4 + 94230402 45579399 45579398 45581775 45579399 45579398 45581775 2377 AGGCAAAGAAAAAACTACACAGTGTGAACAATTAATAAGTACACAAAGTACACAAGTGTGTTTATTACATTTTTGCAAGCACTTTGTTCTACATTTCAAAAACGCCACCATCAAGCTGTTGGCACATTTATGTACAAAACAGATTAATTGTAATGCCTGCTACAAAGCATTCTTTGTGAAAATACAAACTCTAATACCAGAG--AAGAGCCAAAAGCATTAACATCATTACATGAGTTTAAAAGACATAGTTTTAAAAATCAGCACAAACGTTTTAAGACACAAAACTGAAACACTACAATATAGAATCCAAAAGAGGTTCCTATTACTTTT--TGCAGAACTGTAATACTGGTACTGCACATTATGAGAAAACCGTTGACCCTGTAAGACAGTCTAAGTGTaaaaaaaagaaaaaaagaaaaagaaaaagaaacaaagttggaaaaaaagaaaaaaaaaGCAACAGAAATTAAACCAAAACCTCAAATCAAAACCACAACCAAAAATCCCCCAAAAAACCAAAAGAAAAATAATCAATCAACTAATACTACTTAATGCATTATCATGCCACACAAATAACTATAGTAATACCCTCTACTTACTACAAGAATTGTTAAAAATTACTGATGATGCATGACTAGTAATAGTACAAAGAAGAGTTTTACTCAA-GAAGTTTTATTAGAAATGCACTTACACTGAGAGAGAA-TTCACAATGGTCCAATAAGTGCACAA-ACTACCTAAGTTTTTAACACTGACAAAAATGTCTTGTCAGGCTACATCACTTTAAAAGACACTTTACAGCATTCTTGTAGCATTAGAAATAGGCAAAAAAGaaatttaatttaaaaaaaaaaCACTAAATTTGGTCTGATAATACTGAT-----TTAGTTTAAGTTGCGTTTTTTTTGTTTGGTTGGTTGGTTGGTTTTGTTTTTGATACAGGAAATTCTTTCAAATTAAGATGACTTATCTTTCTGATAAAATTTTCCTATCAAAATAAATGTTCAAATATATTACTACACTTTCAAATAATAAGCTCTGTAGTGGTCTTTCACCTAACTT--TAACATAATACAGGTAAACCAATATGCGTAGGAAAGCTAGAAGCCAAGCTACAACATTTATGGAAGTCTCCTTTAATATATCTTGTACAGTTCAG-----------ACAGGTGCAATCCGTTTAAATTTTTAAAGCAGGTAAAAAGACTTCTGATTCCTACGATCACTG----TATTTTTGATATATTACTTTCATAAATGTAGCTAAGCAGTAATTTCTCACATCATCACATGAACAACTCCAATTTAGCATAACCATCATTGAATTAAAGAGAGATCATTCTGTAAAAAACTATGGATAACTATATCACTTAAGTAACAATTGTCTATATACCATAACTCTTTAACAGGTAACCGTGGTATTGAACTCCTTCAAAAGGCAAGTGTCCATGCATTGTTAGCACCACGG--TCGGCATGCTCACAATACAAACAGGAATTATCACCCATGGAACTTGGAACAAGAGAATATTCTTTAAAAACATCAA-TAATAATACAATGTTAACAAAGATAAGAAGCACttttttctttttttttcttttttcttttttcttttttttttcccctttttttttttttttttttttttACCCACTATTACAAATTTAGAAATTGCACCTTTGATCGTTTAAAACGTT-CTCAGGACTTTCATTCAAATTGATGAAGGTCCGTCTGGCAAGATTTCCAAATATAAAGGAAAGTCATCA--GTGTTTTCTTTATATATTGTACATCATGTACAATGGTCCCTTTGAAGTATACCTGTAGTTAAAGTAGTTATTGAACTCAAAACTAAAAAGTATAAAAAGCTACCTTTTTTTCAAAAACATATAAGAAACAATGCAAAAGGTGTTATGCATAACACATACAAAGTGATTAAAAAAATCAAACACATATTTGTATTTGACAATAGTTTAGTATCCTTCATCTAGCGGAACT----AATTAGCTTAAAAGGATTC--AGGAAAGGCTATTTAGGAGCTCTGTGGTAGAGAAGATC----ACACAAAGAAAGAACTAATTTAGAAA-CCAAGTGCTAGACAACCAAGAATTGCACGTGGGTGATATGTAAGTCACCCAAACTATCTTTTGTGAGAAGCACTTTCA-ATTGTTTTTGAA-------ATGGTTGGATGGCCTTTAGTTAAACGACAAAGCATTCACGTGTTAGAAAGTAAGACAAGGTTTCTTCTATGTGTAAGCATTGAGCCGCTCTTTAGAGCGAGTAGAATGAATGTCATGAAGCTCTTGCTCCTCCTTTGACTTAATATCCTCATATTTTTGCATTCTGCAGGCATCTTTCACATAGGCCCAGTTGGCAGACAAGACCATGAGATAATGGACCTG---TAAGAGAA .:.x...:...x.:x.....x.::x:.:.x.x...........................:.............-.........:.....................................................................................--..:...........................:--..:.........::.:.............:....x.......--.......:....:.x.......-.x.........::........:....:..........::...::..x::x:..x.......--..x.x.x......------.......:.-...x......x:.....x..x......:.:......::.-------------------........:...:....:.--------------------------------------:....:..----------------------------------------------...:...:..x.........xx.......x.......--....:...x.:x.....:.....:....:...........:.xx.-..........................x..x........-.xx....:......-:..x................x...........:..:.-............x...x.........-.......-......xx.......x.........................:....:....................................:xx....:.::.::x.x.xxxx:....x......:..........::...........-----..x...x..:..x.----------------------------------...........x.x..:..x:....x..x....x.x.x.x...x.x......xx:::xx.::.......x::x.........:..............:....x::...:...x..:..:.x...xx....--...x.:.x..............:..:x:.x....:...:x....x......:x.:...x.......:..::.:x........x.::...x..:..-----------.x...........:..x...:........:........x:.....:..-----:x.:.:.x..----.....x.:...x.::..:........x...-------.x......::.....:.x..:..x..x.::......::...----.xx.:x..:...:.x.:............x:..x.:x...::.-..::...x..xx....-----........x....:xx...x-......x......x.x....:.::x.x.-...x.........x.:x.......---......::..x.--..x:...........:.:.....x..:.x...-----..-----------.:.::....:::.....:........-x..x.:...........................--------------------------------------------------------..........xx...:...x........................x...:.x.x.....:.x-x:....:.:.x..x.x.x..x.x::xx.:..:-..x.:...:.......x..x.x...---........--:...xx...:...x......x...x......................xx..............x......::...x..........................::..:........---.:........:..................:.........:x:.....:..--............x..x....:..........:--........:..x..:.x:.:.....----...x..:..:.:.::x...--.::.......:xx........:----.....:......----x:...xx:.xxx..:x....x:....-::........:.....x........:..x::......x::.........:x.xx....x..x:..............:-x........x..-------..............:..........:x...x.......x:..x.......-..x.x:.:.x.x.x.:........x.................:...........:..:....................:.....:.....:..:..:.....:..:.....:.x......:............................::.....:..:..:..:....:---x....... 73M1I95M2I31M2D42M2I22M1I61M2D13M6I9M1I39M19I19M38I8M46I37M2I45M1I38M1I14M1D37M1D26M1D7M1I141M5D14M34I130M2D95M11D48M5I10M4D30M7I41M4I43M1I16M5I20M1I28M1I24M3I12M2D32M5I2M11I26M1D33M56I61M1D32M1I25M3I8M2D115M3I50M2I32M2I25M4D19M2D22M4I12M4D26M1D78M1D12M7D50M1I171M3D8M 1689/2107 80.2% 2377/94230402 0.0% 327/2107 15.5% 130053509 60161046 +3108 chr4 + 190214555 175636934 175636933 175637004 71 ATGCATATATATATATATATATGTATTTATATATATTTATATATGTAAATATATATAAGATAAAAAATATA chr4 + 94230402 45365092 45365091 45365161 45365092 45365091 45365161 70 ATAGATATATCTATGTATGTATGTCTTTATATATAGGAATATATTTGAAAGTGTATAAG-CAAGAAATCTA ..:x......x...:...:.....x..........xxx......x.:..x:.:......-:..:....x.. 59M1D11M 53/70 75.7% 70/94230402 0.0% 1/70 1.4% 130271842 59942713 +3681 chr4 + 190214555 175637110 175637109 175637276 167 TATGTGATATATAATATATAATAT-----ATTATATATGATATATTAT----ATGTCACATATAATATATCATATA-TGTGACATATATCATATATTATATGTGACATAATATATCATATATAATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTA chr4 + 94230402 46018749 46018748 46018917 46018749 46018748 46018917 169 TATGTAGTAGG-AATATAGAAAATCAGTGATTTTTTAAGACATTTTATGTTAATCCTTGATACTGCATATCATCCAATGATTCATAGATCGTATATGGTATATGCTGTGATATATGATA---AATATGGCATATA----ATATATAAAAGATAATATACAGTACATAGAATATATTA .....::..x:-......x..x..-----...x.x..x..:..x....----..x::xx...:x::.......x:.-..xxx....x...:.....x:...:..x::.:......x...---.....::x.....----......x.x.x........x.:..:...xx........ 11M1D12M5I19M4I24M1I42M3D13M4D38M 113/159 71.1% 169/94230402 0.0% 18/159 11.3% 129618361 60596194 +6704 chr4 + 190214555 175640124 175640123 175640215 92 CTTACCATAGCAATGACTGCTGCCCCAGCTCCAGCAAGTGCCACAATAAACAAGTGGAAGGTCATGTTCAGCTGCAATGGAAACCACAGAGA chr4 + 94230402 45585325 45585324 45585416 45585325 45585324 45585416 92 CTTACCATAGCAATGACTGCTGCTCCTGCTCCAGCAAGTGCCACAATGAACAAGTGGAATGTCATGTTTAGCTGCAAGGAGGGACAAAGAAA .......................:..x....................:...........x........:........x.::::x..x...:. 92M 79/92 85.9% 92/94230402 0.0% 0/92 0.0% 130054799 60159756 +5153 chr4 + 190214555 175640747 175640746 175640832 86 ACTCACCTCAGTAGATTCGCACATCCTCAAGAAATTCTCAGAGACAGTACAAATTTTCTTTTCCTCTCCAATTGTCACAATTCCTA chr4 + 94230402 45586609 45586608 45586694 45586609 45586608 45586694 86 ACTCACCTCATTCGAGTCACACATCTTGATGAAACTTTCTGATGTGGTACAAACCTTCTTTTCCTCTCCAATTGTTACAATACCTA ..........x.x..x..:......:.x.x....:.:..x..x:::.......::....................:.....x.... 86M 68/86 79.1% 86/94230402 0.0% 0/86 0.0% 130054138 60160417 +11989 chr4 + 190214555 175651824 175651823 175652041 218 ATCCACTTACCAAACTGACGAAGGTCCAAGCAGAGATTTGCTCCCTCCACTAATGTGGTGTTCCGGCAGATGGTCCACAGATTGAAGTACATGTAAACTGGCAGTGAGGTGAAAGCCGTGACTCCCAGCCAGGCCAACATGAAAAGATATGTCAGCATAATGAACT---GCAAAAGAGAAAGAAAT-GGAGAGAGAAAATGTAATC--TACCAAAAAAGAAGAA chr4 + 94230402 45588173 45588172 45588396 45588173 45588172 45588396 224 ACTCACATACCATACTGGCGAAGATCCAAGCAGAGATTAGTTCCATCCACTAAGGTGGCATTTCGGCAAATGGTCCACAGATTGAAGTACATGTAAACAGGCAGAGAAGTGAAGGCTGTAACGCCAAGCCAAGCCAACATAAAGATGTATGTCAGCATAATAAACTGTAGTAAAAGAGGGAAAAACAAGTAAGTCAGAATTTAACTGATACCCAAATGCAAGAA .::...x.....x....:.....:..............x.:...x........x....::..:.....:.............................x.....x..:.....:..:..:..x..x.....:........:..:.x:..............:....---.:.......::.:...:-:.x:..xx.:...x...::--....x...x:x..... 166M3I17M1I19M2I16M 172/218 78.9% 224/94230402 0.0% 6/218 2.8% 130063651 60150904 +3902 chr4 + 190214555 175661301 175661300 175661377 77 GCAGGGCTCCTGTAATTCCAGCTACTTGGGAGGCTGAGCCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTTCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x..x.x....:.............::..........xx.x...x.............:..x.xx:..:.x:.. 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 99628100 90586455 +13369 chr4 + 190214555 175673674 175673673 175673883 210 ACATACCCAAGCGCTCACACATCTGCCACAAGTGGTGATTTTGAAATCCCCATAGAGATCTTTGATGGCCCCAGTTGTGAAGAAACCTTCCACCATCAGCAAAATGCCATACACAAAGAACGCAGCTGCGATGCCGTAGATCACATACTTAAAGATGTCAATCCTG--AGAGAAAAGACAAAGTGATTTATTTCAATAACTTTTCATTGCTG chr4 + 94230402 45596403 45596402 45596614 45596403 45596402 45596614 212 ACTTACCCAGGCACTGACACATCTGCCGCAAGTAGTGATTTTGAAATCCCCGTAGAGATCTTTGATGGCACCAGTTGTAAAGAATCCCTCCACCATCAGCAAAATCCCATATACGAAGAATGCAGCTGCTACACCATATATCACGTACTTGAAGATGTCAATCCTGTACAGGAAGAGCAGAAGTTATTTATCTGCATAACTATTTAAAGCTG ..x......:..:..x...........:.....:.................:.................x........:.....x..:.................x.....:..:.....:........x.::..:..x.....:.....:...............--x::...:..xx:....x......:.xx......x..:.xx.... 166M2I44M 173/210 82.4% 212/94230402 0.0% 2/210 1.0% 130077271 60137284 +3104 chr4 + 190214555 175675225 175675224 175675280 56 TATTTATTTTATATGTATATATGTATATATATTATATATATATCTGCATGATCAGT chr4 + 94230402 84227110 84227109 84227165 84227110 84227109 84227165 56 TATTTGTTATGTATACATATATGTATATTCATTATATAAATATTTGAGGAATCAGT .....:..x.:...::............x:........x....:..x:x:...... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 91448115 NA +3272 chr4 + 190214555 175684837 175684836 175684903 67 TTTTCTTAACTATTTGTGTGTGTGTGTGTGTTTTGTTTTGTTTTGTTTTGTTTTATTATTATTTTTT chr4 + 94230402 44367556 44367555 44367622 44367556 44367555 44367622 67 TTTGTTTAGCTGTGTGGGTGTGTGGGCTTGTTTGCTTTTGTTGTGTTCTGCTTTATTTGTGTTTTTT ...x:...:..:.x..x.......x.:x.....xx.......x....:..:......xx.:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 131317281 58897274 +3470 chr4 + 190214555 175688771 175688770 175688879 109 TGTAATTATG-----TACCAATAAATACATACATACATATATACATACATATCAAACTGTTGGTTTTTGTTATTTTCTGTTTTTTGTTTGTTGGTTTGTTTTTTAG---AGACAGGG chr4 + 94230402 22701588 22701587 22701704 22701588 22701587 22701704 117 TGTAATTATGCCTACTTCTAACAAGTAAATACATTCCTGCAGTTATTTTATTTTCACAATGGATTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAGGTAAGAAAGGG ..........-----.x.:..:..:..x......x.x.::.xx:..x:xxx.:xx..x:.x.:...:....:.xx.:.x.............x.............---...x.... 10M5I91M3I8M 77/109 70.6% 117/94230402 0.0% 8/109 7.3% 152987183 37227372 +15126 chr4 + 190214555 175701565 175701564 175701792 228 AGTGACTTACATGGTAAAAACATCCAGTGTGTCTCCAGCAGTTCTTGCCATCTCAAAGTAGGTTTGCAGAATGTTGACAGTTCCAGAAAGCGCTTCATGACCGCAGCCACAGAACAGGGCAACACCCGCATAGAGCAGGATGGTGGCAATCAGAGAGGCATAGGGAATGCCCCCCAGGCATTTGATACAGCATTCAAAACACCCTGTAGAAGATCACAAAGGGAGAAA chr4 + 94230402 45608528 45608527 45608755 45608528 45608527 45608755 228 AGTAACTTACATAGTAAAGACATCAATAACATCTCCTGCAGTTCTTGTCATCTCAAAGTAGGTTTGCAGAATGTTGACAGTTCCTGAAAGTGCTTCATGTCCACAACCACAGAACAGTGCAACACCAGCATACAGCAGTATGGTAGCAATCAAAGATGCATAGGGGATACCTCCCAAGCATTTGATGCAACACTCAAAGCACCCTACaaaaaaaaaaaaaaaaaaaaa ...:........:.....:.....x.xx:::.....x..........:....................................x.....:........x..:..:...........x........x.....x.....x.....:.......:...x........:..:..:....:.........:..:..:.....:......::.:..:.xx.x...:::.:... 228M 186/228 81.6% 228/94230402 0.0% 0/228 0.0% 130093037 60121518 +3171 chr4 + 190214555 175711426 175711425 175711521 96 ATATATATATATATATATATATATATATATATACACACACATACATACATGTATATATAAATATAATATATTTATATACTTGTATATATAAATACA chr4 + 94230402 58071350 58071349 58071442 58071350 58071349 58071442 93 ATGTGAATGTATTTTTA-ATATATATATGTATGCACACACATAGCTTAGTTCATTTATGTACATAATTCCTCTATATAC--ATAGGTATAAATATA ..:.:x..:...x.x..-..........:...:..........xx.xx:.x:..x...:x.:.....x:x.:.......--:..x:........:. 17M1D61M2D15M 66/93 71.0% 93/94230402 0.0% 3/93 3.2% 117640076 72574479 +3006 chr4 + 190214555 175711428 175711427 175711488 61 ATATATATATATATATATATATATATATATACACACACATACATACATGTATATATAAATA chr4 + 94230402 61270775 61270774 61270835 61270775 61270774 61270835 61 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA ..:x......x.:.......:......:::..::.....x...:x........x:..x.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 114440653 75773902 +3257 chr4 + 190214555 175718487 175718486 175718558 72 GCACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGTAGGAGAATCGCTTGAGCCCGGGAGACGGCGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......::..........::........x:xx.x...x.:.....:...:.:..x:xxx..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 99685281 90529274 +3068 chr4 + 190214555 175722144 175722143 175722213 70 TGGTGCGGGGGTGTGCACTTGTAGTCCCAGCTACTTAGGAAGTTGAGGCAGGAGGATCCCTTGAGCCCAG chr4 + 94230402 76033192 76033191 76033261 76033192 76033191 76033261 70 TGATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAG ..:.:.:x:.xx......x......:..........:::.:.:....x.xx.x.:.x.x.....:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 99688952 90525603 +3456 chr4 + 190214555 175726865 175726864 175726925 61 GTGCACCTGTAATTCCAGCTATTCAGGAGGCTGAGGCAGTGGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.........:.::::........x.xxxx...x.............:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 99693661 90520894 +3051 chr4 + 190214555 175751744 175751743 175751790 47 TGTTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGGTTTGTTTGTTTG chr4 + 94230402 53615466 53615465 53615512 53615466 53615465 53615512 47 TGCTTTTTTTTTTGTTGTTGTTGTTTTAATTTGCATTTGTTTGTTTG ..:.......................xxx...xx:............ 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 122136278 68078277 +3413 chr4 + 190214555 175751747 175751746 175751790 44 TTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGGTTTGTTTGTTTG chr4 + 94230402 77610505 77610504 77610548 77610505 77610504 77610548 44 TTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCATTTG ...............................x...x..::.... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 98141242 92073313 +3407 chr4 + 190214555 175751748 175751747 175751794 47 TTTTTTTTTGTTGTTGTTGTTTGTTTTTTGGTTTGTTTGTTTGTTTT chr4 + 94230402 74136540 74136539 74136586 74136540 74136539 74136586 47 TTTTTTGTTGTTATTGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTT ......x.....:........x.x.....x................. 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 101615208 88599347 +3906 chr4 + 190214555 175778494 175778493 175778567 74 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 99745290 90469265 +3339 chr4 + 190214555 175787054 175787053 175787114 61 TGTTTGTTTTCCTTTGTTTTTCTATTTCTCCCTCTGTTCTTTTTTTTGTTGTTGTTTTTGT chr4 + 94230402 153453 153452 153513 153453 153452 153513 61 TGTTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTTGTTGTTGT ......::.xx...x:...x...x.:....:....x.::.................x.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 175633601 14580954 +51036 chr4 + 190214555 175811762 175811761 175813422 1661 GTCTTTGTTCTATCAGATGTCCATGCAAAGATATGGATAATGGTTCCATCACCAAATTTTTAAC------TAACTCCAAATATTGTAT-----------TTGTGGCTCACACTAGGGATCCCTTGACCCAGCTCGGCAAGTGTGAAATCACGAAATAAATGAAGGTTAACAAAGACTGGTCTAAGGAATAG--TTCACTACAATACCGCAATGCTCTTCTCACTAATACTCGACTCTGCATTTCGGTACTTATA-TCTGAAAGATTTGCAAATAATGACAACATTCGTGCCAGACATTACTGCAAGTGAGGAACAGACTAA-------AGGAGAGGAAGGAACAAAATGCCTTCCA------AGAGAGAAACATTCATTAGCCTTACTGGCAAGTGTCTAAAGCAAACAAGGAAACTGCAAAATAATTACTTAGTTACAAATAAACGCTTTTAGCACAGTACCTTTTTGTGTCTGTCCCTCTTCCATATTCTCTTCCATGGCTACCTTTCTTCAGTAGAATCTGGTACACGGAATTAATCAAAAGCT-CAATTAGATGTTGGAAAAACTGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGGGAAGCTCCAACAGCAGTGGCTTGGGCAAGTCCTCAGAGCTTAGCTCAGGCTCCCTCGTTCCTCTTGTTTGCTTGGAGACAGGCTGTCAAGTGTAATTTCATTCAAATTACTCTTCCGTGAAGATTATCAATTTTTCTTCTCAAAGCTGCCCATTGTGTACCACTGTAAGCAGGTATTCAAACAAATAGCCTGAGAA-TTTTGGGGGGAAATTTGGTCTGAATCCCAGGAGCAGAGACACTATGATTCACAAGTCTTGCTTTGCAT-TTAAAATGGGGAAAAGAAATTGAGGTTTGTATTGAAATCTGGGCTTTAAATTGGAAACAGGCTGAGCTGTGAACAGATGGAGGGGTGTCCTCCTAACATGAAGCCGACCACCAACCCGTAATTCCCCC--CTTCATTCCAGAGTGGGAAAGCCCAGATTCCCGTCGGTTCTTTATGCTGCAGCAGTGGCTTCTCACCCAGTC---------------------------------AGATACGTTGCAAAAAAACTGTGTTTTCCTTTTCTCTCCTCACTAAGTATTTAGTTAATTTGATTTAAGGTGCCAAGAAAGGATGCAGTTATACCATCTCAGGGTTTATCTGCAAAAGTTTATTACTAAGACAGGACTTGTAATCCCACACCTTTGAGATTTAAAAAGAAATAGAAGCGTGGCTGTCAAAGGAGTGAGTATAAAGCTCTAAGC-CTGAGA--GATACATGTTTTAAGTAATTATTTTACTTAGTGCCA-TATGACTCTTAAGTAAAAGGGAGAAAACCACTGGAAGGAAAAACCCT-------ATTGATGTCTTTGTTATTTATTGTTATGATTATAGCCCACGAAAGCTGCTGGTTTCCAATGAGAATCTCTTGAAAGGGAATTTCTTTAAA-GGTCA--------GTGTTAGGGAATGAGAAGAGTGATGTAA--------------------------GGGAGGAACAAATTTTAGATAAGAAACAAGAGGATAGCAATTTATAATGGGAATCTGCAAGCTGATTTGGAATGCAAATCACAATGCTGCAGTCTGGCGAT-AATTAGCATTTG-TACTTCAGCCTACTGAGTGACAGGGCA-CAGTCCAAGAGTCTCAATACTTCACAAAAGGTATAGCAAGAAAATAAA chr4 + 94230402 45682493 45682492 45684185 45682493 45682492 45684185 1693 GTCTTTGTTCAGTCTGGACTCTCATTCAAGGTGTAAATACTGGCTACATTGTTAGATATCCAACAGCAACCAGCTTCAAATACTGTGTGAGTAGCTCTCTCATAGTTCACACTCGG-CTCCCTTGACCCAGCTAGACAAGCGTGAAAACATGAAATAAATGAAGGCTAACAAAGGCTGGTCTGGGAAGCAGCCTGCATTAAATGCTTGCAATATTCTAAGTACAAATGTAAAATTCACAGTTTAGATCCCTTTAATATTAAACATCATGCAACAATCACTATATTAATACTAATTGCTACTGCA---GAGAGACAAATGAATGTAAGCAGTACAGAAAGGAAAGAAATCTTTCCCATCTACCGCATAAGGACATTCACTAACCTTAC-AGCATGCTGCTAAAGCAAACAAGGAA-CTGCAAAATCATTATCTCTTTGCAAACAAA-GCAATTATCACAATACCTTTTTGTGTTTGTCCCTCTTCCATATTCTCTTCCATGGCTACCTTTCTTCACTAGAAACGGCTACAGAGAATTAATCAAAGGTTTCAGTCAGATGTAGGAATAAGTGTGGATTTTTTTTTTC----------------------------CCTGGGAAGCTCCAACAGCAGAGGCTTAGGCAAGTCCTCAGAGCTTAGC-AAGGCTCCCTCACTCTCCTTGTTTGCTTGGAGACAGGCTGTCAAGTGTAATTTCATTCAAATTACTCTTCCGTGAAGATTATCAATTTTTCTTCTCAAAGCTGCCCATTGTGTACCACTGTAAGCAGGTATTCAAATGAACAGCCTGTGAATTTTTGGGGGGAAATTTGGTCCGAGTCCTTATGGCAATGACACCA--ATTCATAAGCCTCACTTCGCATATAAAAATGGAGAAAAGAAATTGAGGTTTGTACTGAAATCTCTGTTTTAAATTGGAAACAGGCTGTACTGAAAACAGATGGAGGGGTGTCCTCTTAATGTGCAGCAGACCACCAACCCATAATTCCCCCTATTTGCTACTGAAGTGGGAAAGCCCAGATGCCTGTGGGTTCTTTATGCTGTATTACTTGtctctctctccctccctcgctccctccctctctctctctctctccctcAGCACATTTAAGAATAATACAAGTCTTCATTTCCCTCCTTCTCATATATCTGTATCATCT-------GGAGCTAACAACAAATATACATACA----TTTAGAATGTACTAGAAAACATTTATAGCAAACATCTA---TGTATGCACATGC-----ATGCTTATTCATACACACAAGC-----------AGAATTTAATACATCATATTAATCACTGCAAATGATACACACCCTA------TACATTATCTGCCATCAGTGTGAC--------AATAAACAGGAACTCAGGGGCGGTACAGAGCTTTAAAACAACCACTGTATCAATTCCTTATCTGATTGCTAGTATCCAAATTCATCTGTATGTTTCTATTCCCCAT-TTTAAAAAGTAGATCTCTGAAAATGGTGAAGCACAACATGTTTATACATGAGGAAGCCCATACAAACACATGCACATTTATGGATTTACTCAGGAAAAGCATAGGTTAAATACACTGTGAGGGCACAGTCATTT---GGGGAGCTCTGCAGTCTGATTTGGAATGCAAATCA-GACGCTGCAGTCTAGCAGTAAATTAGCATTTTCTACCTTAGTCTA-TGGGTGACGTAGAATCATTTCAAGAGATTCATCATTTCACCAAAACTACAATTAGATCATAGA ..........x:..x.:xx..:xxx:x...:.:.::...x...:.x...::::.:..x.::...------:.:..:......:...:.-----------.::.:.:.......x..-x...............x.:....:......x..:..............:........:.......::.:.::..--.x..:..x.xxx::.....::...xxx:..x...::xx:.:..xxx:...x.:.x.:.x..-.x.x...x..:xxxx..:...x..x.:...x:.:.:.:x:::.......---...::...:.:x..-------..x.x..:......x:....x::.:...------:x.x.:::.......:..:......-:...x.:xx.................-.........x....::.xx..:....:...-..xx...x....:.............:.........................................x.....x.x.x....x:............:.:.-..:.:......x....x..x..x..:..........:----------------------------.....................x.....:.....................-x..........::..::.......................................................................................................................::..:......x...-....................:..:...:x:x:...:x.....:.--.....:...:..::...:....-.x.......:.....................:........xx.:....................x:...x:.....................:...::..x...x............:..........--:..xx.x.:::.................x..:..x..............:.x:.x.x.::....x.:.xx..---------------------------------x:::..:..xx.:..x..:xxx:x.:.:.x....:.....:x::.x:...:.:xx.x..:.-------..x..:..x..x::..::.xx..:.----:.:..::.x..::x.x...x:.....x:.x..x.:xx:---....xx.x..::.-----.x::...xxx.x.x.:.x....-----------..:.x.x.:..:.xx::x:...x.-...x:.--......:::::..------..:x...::.:x:::..-.:....--------..x.::x..:..x:..xx..x:.x.x.:.x.:.-------.:::x...x.:x:..x:....:xxxx..x.x:..x..x.xxxx.x...:xx.....:.x.xxxx..-.:.x:....x::..:...xx...-...x.--------:....x:x:x.....:.::x:x..::..--------------------------:...::.:..x.xx...:...x:xx:::..:.x.:..:x....---:x..::x......:x....................-:.:..........:..::.-...........x-...:.:..:...-..:.....:x:.x.-..x.:......x:...x:.:.....x...:x..:.::x...xx...:. 64M6I18M11I17M1D74M2I61M1I49M3D14M7I28M6I25M1D26M1D30M1D101M1I37M28D49M1D151M1I44M2D22M1I128M2I72M33I61M7D25M4D38M3D13M5D22M11D24M1I6M2I13M6D17M1I6M8D33M7I66M1D23M1I5M8I28M26I43M3D35M1D19M1I12M1I12M1D14M1I48M 1117/1573 71.0% 1693/94230402 0.0% 208/1573 13.2% 130129269 60085286 +3690 chr4 + 190214555 175816051 175816050 175816133 83 CATGGTGGTGCACACCTATAGTCCCAGCTACTGGGGAGGCTGAGGCAGGGGAATCACGGGAGCCCGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--.:....:.........x.::........x.xx.x...x...xx..:...:.:..x..x:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 99782854 90431701 +3365 chr4 + 190214555 175871334 175871333 175871412 79 GTAGTGGATGCCTGTAATTCAAGCTACTTGGAAAGCTGAGGCAGGAGAATCACTTGAACCCAGGAAGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:...x.:.--....:...x.........:..:......x.xx.x...x.............:.:x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 99838133 90376422 +3259 chr4 + 190214555 175900133 175900132 175900215 83 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGAAGAATCTCTTGAACCCAAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:...........::.:......x.xx:x...x.x..........::..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 99866936 90347619 +3568 chr4 + 190214555 175905428 175905427 175905497 70 TATGTGTGGCCCAAGACAATTCTTCTTCTTCCACTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTG chr4 + 94230402 43915637 43915636 43915706 43915637 43915636 43915706 70 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATG ...:.....:......:....::.:...x::x.x....x.....:x...x......x.....::...x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 131989791 58224764 +3073 chr4 + 190214555 175905436 175905435 175905500 65 GCCCAAGACAATTCTTCTTCTTCCACTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGGAG chr4 + 94230402 47258242 47258241 47258306 47258242 47258241 47258306 65 GCCCAATGCAGTTCCTCTCCAGTCCACGTAGCCCAGGTAAGCCCAAGGGTTGGAGACCTCTGTAG ......x:..:...:...:.xx:.xx:..:.......x.....x..:.:.....x...:...x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 128647194 61567361 +3621 chr4 + 190214555 175924700 175924699 175924769 70 CATGGTGACCCACGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::...::x....--....:.............::........x.xx.x...x..........:..:.. 14M2D54M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 99891503 90323052 +3274 chr4 + 190214555 175933510 175933509 175933611 102 AAAATGAAAATTTATGACTACACAAAGACTTACACGTAATGTTCTT----AGAAGTTCTTAGAAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTCACGATCTT chr4 + 94230402 15612057 15612056 15612162 15612057 15612056 15612162 106 AAAATGATGATTTAGAGGATCTTTAATTCTTATTTGTGGTCTTCCTTTACAGATGTTCGGAGGGTTTTTTGTTTGTTTGTTTGTTTTGTTATTTTTTCCTAATTTT .......x:.....x::xxx.x:x..xx....:x:..::.x...:.----...x....xx..::x.....................xx..:.......x::..:.. 46M4I56M 69/102 67.6% 106/94230402 0.0% 4/102 3.9% 160321453 29893102 +12125 chr4 + 190214555 175944177 175944176 175944429 253 AATAGATTTAAAATTATGTACCAATGT-CTTTTTCATTATATGTGGTAATAAAGTGCCAAAAAACAAGCTACAAGCTGTTTGTGGCCTAAGATATGCAAAGAATTAATTTTTGTGCTGGCATATACTGTAATTAGAAATTGTTCTGTGCATCATGATTAAACCAGTAACTATGGTAACGAGAGCAGGAAAGCATGAGTGCAAAAGGAAACAGCCCGAGTAAGTCAGGGATAAGCTGCATTTCATCTTTCTTTTT chr4 + 94230402 45721962 45721961 45722213 45721962 45721961 45722213 252 AACAGGTCAAATACGATGTGTTAATGTGCTACTTCAGGATGTGTGGTAATAGAATGCCAAAGAACAAGCTGCAAGCTGTTTGTTACTTAAGATACTCAAAGAATTAATTTT-ATGCTGGCATATACTGTAATTAGAAATAGCTCTGTGCATCATGATTAAACTAGTAGCTATGGAAACCAAGGCACACTAGAATAAATCTAAAAGGAGA-ATACTGAATATACCAGTCATAAAACTCCTCTAATCTGTTTATTT ..:..:.:x..x.:x....:::.....-..x:....xx..:..........:.:.......:........:............x:.:.......:x...............-:..........................x.:....................:....:......x...x.::...x:xx..x..:.:.x:.......:.-.xx.:..:..x::...xx....:x:x.x.:.x....x.:.x... 27M1I83M1D97M1D44M 189/251 75.3% 252/94230402 0.0% 3/251 1.2% 130222215 59992340 +3186 chr4 + 190214555 175953024 175953023 175953071 48 TGTTTTTAAAAAAAAAAAAAAAAGGAGAGAAAAAGAAAAGAAAAACAG chr4 + 94230402 13073575 13073574 13073622 13073575 13073574 13073622 48 TGTTTTTAAAAAAAAAAAAAAACTGAGAGAGAGAGAGAAAAAGAAGAG ......................xx......:.:...:..:..:..x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 162879449 27335106 +3053 chr4 + 190214555 175964285 175964284 175964326 42 CAAAAACAAACAAACAACAACAACAACAACAACAACAAAACC chr4 + 94230402 39912623 39912622 39912664 39912623 39912622 39912664 42 CAAAAACAAACAAACAACAACAACAACAAAAAAGACAACATC .............................x..x:....x.:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 136051662 54162893 +3655 chr4 + 190214555 175969555 175969554 175969653 99 GAAAAAATTATCTGGGCGTGGTGGTGGGCACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGCAAAGGTTGTAG chr4 + 94230402 76033185 76033184 76033277 76033185 76033184 76033277 93 GAAAGGATGAT----ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..x..----:.:::......--...x....:.:...........::........x.xx.x...x.x.........:.:..x:xx:..:..... 11M4D11M2D71M 67/93 72.0% 93/94230402 0.0% 6/93 6.5% 99936370 90278185 +3026 chr4 + 190214555 175984002 175984001 175984040 39 CTCTCTCTGTCTCTCTCTCTGTCACACACACACACACAC chr4 + 94230402 75248049 75248048 75248087 75248049 75248048 75248087 39 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACAC ..::....x...........x.................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 100735953 89478602 +3002 chr4 + 190214555 175993113 175993112 175993171 59 TCCCACCCTCCCTCCTTTCCTGTTTCCCTCCCCTCTCTCCCTCCCCTCTTTCTTCCTTA chr4 + 94230402 58510492 58510491 58510550 58510492 58510491 58510550 59 TCCCACCTTCTCTCCCTTCCAGTTGCTCTTTGCCATCTCCCTCCCATCCTGTCTCCTCA .......:..:....:....x...x.:..::x.:x..........x..:.x::....:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 117482621 72731934 +3588 chr4 + 190214555 176003826 176003825 176003904 79 GTGGTGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGAAGGATCACTTTATCCTGGGAGGTTAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--......:...........::........x:xx:x.:.x.....x.x..::.:..x..x:.....:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 99970625 90243930 +3030 chr4 + 190214555 176015868 176015867 176015926 59 CAGTTGAGAAAGCAAGTTTCTCTTTTTCTTTTTTCTTTTTTCTTCTTTCTTTCTTTCTT chr4 + 94230402 67081942 67081941 67082000 67081942 67081941 67082000 59 CAACTGGGATGACAAAGAGCTCTTTTTTTTTTTTTGTTGTTATTCTTTCTTTCTTTCTT ..::..:..x::...:xxx........:......:x..x..x................. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 108933926 81280629 +3101 chr4 + 190214555 176041950 176041949 176042039 90 TGTGTTGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACACACATATATATGTAT chr4 + 94230402 54005680 54005679 54005767 54005680 54005679 54005767 88 TATATTGAA--CACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT .:.:...:.--..:....:...x..........:.............x.x.:x:::x.xxx::....x.x.xx:...:..:....x.... 9M2D79M 60/88 68.2% 88/94230402 0.0% 2/88 2.3% 122036270 68178285 +3000 chr4 + 190214555 176041956 176041955 176041998 43 GGATGCATATATATATATATATATACACACACACACACACACA chr4 + 94230402 4409079 4409078 4409121 4409079 4409078 4409121 43 GGCTGTACATATATATATATATACACACACAGAGACACACACA ..x..:.:...............:.......x.x......... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 171632877 18581678 +3549 chr4 + 190214555 176046713 176046712 176046783 71 TATGTGTGGCCCAAGATAATTCTTCTTCTTCCAATGTGGCCCATAGAAACCAAAAGATTGAACGCCACTGT chr4 + 94230402 43915637 43915636 43915707 43915637 43915636 43915707 71 TATATGTGGTCCAAGATAATTTCTTTTCACTAAATGTGTCCCAGATAAGACAAAAGTTTGGATGCCCATGT ...:.....:...........::.:...x::x......x....x.x..:x......x...:.:...xx... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 132131076 58083479 +3105 chr4 + 190214555 176053562 176053561 176053624 63 GCGCACCTGTAGCCCCAGCTACTTGGAAGGCTGAGGCAGGAGAGTTGCTTGAGCCCCAGAGGC chr4 + 94230402 76033204 76033203 76033265 76033204 76033203 76033265 62 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAA-CCCAGAAGC .:....x.....::...........:.........x.xx.x..:x::.....:-......:.. 53M1D9M 47/62 75.8% 62/94230402 0.0% 1/62 1.6% 100020358 90194197 +3977 chr4 + 190214555 176068460 176068459 176068529 70 CGTGGTGGTGCACGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATCTCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::...........--...:.:...........::........x.x..x...x.x...........:.. 15M2D53M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% 100035263 90179292 +3066 chr4 + 190214555 176076196 176076195 176076280 85 CTGTATGTTTACATATATAATATATATATATATATATATATATATATATATATATATATACACACACACACACATATATATACAT chr4 + 94230402 69752216 69752215 69752300 69752216 69752215 69752300 85 CTTTATGTACACACATATGCAATGTAAATATTTACATATAGAGATATTTACATTTACATTAAAATATTTAGACATATTTGTACAT ..x.....x:...:....:xx..:..x....x..:.....x.x....x..:..x..:..xx.x.:.:x:.x......x.:..... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 106323980 83890575 +3028 chr4 + 190214555 176076218 176076217 176076277 60 TATATATATATATATATATATATATATATATATATATACACACACACACACATATATATA chr4 + 94230402 58675386 58675385 58675445 58675386 58675385 58675445 60 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ..:.:..x.x.:...::.........:.:x:....:.:.........x..x......x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 117400832 72813723 +3195 chr4 + 190214555 176076221 176076220 176076291 71 ATATATATATATATATATATATATATATATATATACACACACACACACATATATATACATGTAAGCAAAAT chr4 + 94230402 74671060 74671059 74671129 74671060 74671059 74671129 70 ATATACAAAAAT-TAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAAT .....:.x.x..-..xx.:..............................x.x.x.x.:.xx...:x..... 12M1D58M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% 101405161 88809394 +6320 chr4 + 190214555 176096346 176096345 176096674 329 ATTAAAATTGTTTCAGCTGAAATATTTGTGCAGTTCTAGCCTTTTGTACTGAACATCATTTCACAAGGGAGATTT--------------TGGTAAATCTTGTTTGGTTGAAACACA----TTGTTGTTACTTTAGGTGCTGACTATTCTGATGCCGAGTTTCCAATTGCCTTGATTAAAGTAGAAACATTC---TATGGCTTGGATGACTTACATTTCAAATTGGTTTGAGCAAGATGATTGGTATGAAGGACTACAAAGAGTAAGATACATTTACTTGTAATTACGATTTCCTGCGATTTTTTTTCTGCTTTGCTTCTCATATAG-TTTTATATC-TGTGTCATTTATATC chr4 + 94230402 45745452 45745451 45745770 45745452 45745451 45745770 319 ACTAAAAGTATTTCAGACTATATATCTATGAATTTAAAGCTTTATTATCAGGGAATCATAGCAGAGTTCAGATCTGATCTTTGGTTAGCTTGTAGTTTTCAGTAAATTTTAGCACAGAACTCGTCATACTTGCAGGTG-------TTCAGATGCTGTATTTTTAATTTCC---------------ACATTCAGTCATGGCTTGGATGACTTACATTTCCCACTGGTTTGATGAAGATGATTGGCATGAAGGACAGAAACGAGTAAGAATTGCTTA-----AATTAATATTTT------TCTCCTTTTAGTTTTGTTTCTCTTTAAGCTTCTGTTTCTTATGTAACTAATATC .:.....x.:......x:x.x....:.:..x.x..xx...:..x.xxx.x.::x.....xx..x.:xxx....:.--------------.x...:x.:.::x.x::..xx.:....----.:..::.xx:.x:.....-------...x.....:.x:...::....x..---------------......---:.......................xx.:........xx...........:.........x:x..x........xx:::...-----.....xx....:------.:.::...:x.:....:.....x.xx..-..:.:.x..-.:...x.:.x..... 75M14I27M4I18M7D25M15D6M3I81M5D12M6D28M1I9M1I15M 202/296 68.2% 319/94230402 0.0% 56/296 18.9% 130350894 59863661 +3003 chr4 + 190214555 176107807 176107806 176107883 77 GATAGTGTTTTTCCCTTCCTTCCTTCCTTTCCTTCCTTCCTTCCTTTTTTTCTTCCTTCCTTCCTTTTCCTTCTTTC chr4 + 94230402 708533 708532 708609 708533 708532 708609 77 GACTGTGTTTTACCCTCCCTGCCTTCCCTCCTCCCCTCTCCCCATCTGCCTTTCCCCATCTGCCTTTCCATCCTCTC ..:x.......x....:...x......:.:.:::...::.::.x.:.x::.:.:..:x:..x.....:.x.:..:.. 77M 48/77 62.3% 77/94230402 0.0% 0/77 0.0% 175399274 14815281 +3157 chr4 + 190214555 176107816 176107815 176107949 134 TTTCCCTTCCTTCCTTCCTTTCCTTCCTTCCTTCCTTTTTTTCTTCCTTCCTTCCTTTTCCTTCTTTCCTTCCTTTTTTCCTTCCCTCCTTCCTTCCTTTTTTCTTCCTTTTTTCCTTCCTTCCTTCCTTATTT chr4 + 94230402 85792750 85792749 85792883 85792750 85792749 85792883 134 TTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTTGATGTTTCTGCCGCGGTCTTTAGCTGTTT ..:::..::..x....::.:::x.x.x.x::..:.x.x........::xxx...x...::..x..:.x.:..x..xx.:..........:.:.:....::.:.:.xx:x...:.x.:x.xx..:..xx:.:... 134M 76/134 56.7% 134/94230402 0.0% 0/134 0.0% 90315066 NA +3412 chr4 + 190214555 176107872 176107871 176107942 71 TTTCCTTCTTTCCTTCCTTTTTTCCTTCCCTCCTTCCTTCCTTTTTTCTTCCTTTTTTCCTTCCTTCCTTC chr4 + 94230402 57538440 57538439 57538510 57538440 57538439 57538510 71 TTTGTTACTTTTTCTTCTTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ...x:.x....:::.:...:x:...:...:....:.:x.:x....:.........x....:...:....:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 118569432 71645123 +9697 chr4 + 190214555 176111562 176111561 176111709 148 TTTGTTTTTCAAGGCAAACATGTCCCAGGTAAGGCAAGTGGGATTGCTGGCTGCTGGATGTCAGCCATGGAACAAGGATGTATGTGCTGCCAGTGGAGACAGGTTTGCATATTGTGCGACCCTGGCTATCTATATTTATCAGGTAAAA chr4 + 94230402 45752513 45752512 45752660 45752513 45752512 45752660 148 TTTTGTCTTAAAGGCAAAAATGTCATATGTTAGACAAGTGGGTCTTCTAGCTGCTGGATGTCAGCCATGGAACAAAGATGTTTGTGCTGCTAGTGGGGACAGATTTGCCTATTGTGCTACACTTGCTATTTATATTTATCAGGTAAGA ...xx.:..x........x.....x:.x..x..:........x:.x..:..........................:.....x........:.....:.....:.....x........x..x..x.....:................:. 148M 123/148 83.1% 148/94230402 0.0% 0/148 0.0% 130359049 59855506 +13316 chr4 + 190214555 176115731 176115730 176115983 253 AATATTAACAGTGTATTATCTTAAAAAGGAGCACTAAAATATTTTATTTATATATTTTGTTTTAGTTGGATCACCGTTATAATGAATTCAAACTTCACGCAATTATGTCTGAACATAAAAAAACAATCACAGCAATTTCTTGGTGTCCACATAATCCTGATCTGTTTGCAAGTGGCAGTACTGATAATTTAGTGATCATTTGGAATGTTGCAGAACAAAAAGTCATTGCTAAACTCGACAGTACAAAAGGTAT chr4 + 94230402 45753649 45753648 45753897 45753649 45753648 45753897 249 AGTATTTAAGGTGAATTTTTAAAAAAATTATTTCTAAAGTGA---ATTTTTACTTTTTGTTT-AGCTGGATCACCAATACAATGAATTCAAGCTTCGAGCAATTATGTCTGAGCATAAGAAGACAATCACAGCCATATCTTGGTGTCCACACAATCCTGACATGTTTGCGAGTGCCAGCGCAGATAGTTTAGTAATCATTTGGAACGTGACTGAACAGAAAGTTGTGGCCAAGCTGGATGATACAAAAGGTAT .:....x.x:...x...x.:xx.....xx.x:x.....:.:x---....x..:x........-..:.........:x..:...........:....:x..............:.....:..:...........x..x..............:........:x.......:....x...::.x....:......:...........:..x:.x.....:.....::.x..:..:..x..:::............ 42M3D17M1D190M 193/249 77.5% 249/94230402 0.0% 4/249 1.6% 130362082 59852473 +15113 chr4 + 190214555 176119845 176119844 176120165 321 ATCTGTATTTAATGTATTCCAGGGATCCCTGCTTCTCTTAGTTGGTGCTGGAATGCAGAGGATGTGGTGGCATTTGTTTCCCACAGAGGCCCACTGTTCATTTGGACCATCTCAGGACCAGATAGTGGAGTGATTGTACACAAAGATGCTCATAGCTTCTTGTCTGATATCTGTATGTTCAGATGGCATACACACCAAAAGGGGAAAGTTGTGTTTGGTCATATTGATGGAAGTCTATCAATTTTTCATCCAGGTAAGAATTTAATTAGCAAGGTATCTTAAATAGTATATTTTTCTTATATATAAT-TTTGTACTTGCTTG chr4 + 94230402 45755569 45755568 45755882 45755569 45755568 45755882 314 ATCCTTATTCTGTATGTTTCAGGAATTCCTGCATCACTTAGCTGGTGCTGGAATGAAGGTGACGCAGTTGCATTTGTGTCCCACAGAGGTCCCTTGTACATTTGGACTATCTCAGGACCTTTGAGCGTGGTAACGGCGCATAAAGGAGCACACAGCTTCTTGTCAGATATCTGTCTGTTTAGGTGGCATCCAAAAAAAAAAGGGAAAGTAGTCTTTGGACATACTGATGGAAGTCTGTCTATTTTTCAGCCAGGTAAAAACTGATATGGTGAAACGT--------ATATGTTTTTGTTGTTGATGATCTTTGTATATGCATG ...:x....:x:.:.:..:....:..:.....x..x.....:.............x..:x..:.::..x........x...........:..x:...x.........:...........xxxx..:.x:..:.:x.::..:....:x..x..:...........x.........x....:..:......x..x.xx....:........x..x.....x....:............:..x........x........:..:.x.xx.:.::.::::.--------:...:.....x..:.xx..:..-......:x...x.. 277M8D22M1I14M 232/313 74.1% 314/94230402 0.0% 9/313 2.9% 130364276 59850279 +17819 chr4 + 190214555 176125074 176125073 176125361 288 TTGGAAATAAT---TATCTCTGTATTTTAACAGGTAATAAAAATCAGAAACATGTTTTGAGACCAGAATCTCTTGAAGGGACAGATGAAGAGGATCCAGTTACGGCCTTGGAATGGGACCCACTATCTACTGATTATCTTCTAGTGGTTAATTTGCATTATGGAATTCGCCTGGTAGATTCTGAATCACTTTCTTGCATAACAACATTTAATCTTCCCAGTGCAGCAGCTTCTGTACAGTGCTTAGCCTGGGTTCCCAGTGCTCCTGGGATGTTTATAACTGGAGGTAAGC chr4 + 94230402 45756465 45756464 45756755 45756465 45756464 45756755 291 TTTGAAATAATCTGTATTCTTGTGCTCCTAAAGGTTCTAAAAATCAGAAGCATGTCTTAAGACCAGAGTCTCTTAAAGGAACAGATGAAGAAGATCCAGTTACAGCACTGGAGTGGGACCCTTTGTCAAATGACTACCTTCTTGTTGCTAATTTACATAATGGCATTCAACTAGTTGATTCAGAATCTTTGTCCTGTATCACAAAATTTAATTTTCCCAGTGCAGCAGCATCTGTTCAGTGTTTAGCCTGGGTTCCTAGTGCACCTGGAATGTTTATAACTGGAGGTAAGC ..x........---...:::...::.::x.x....xx............:.....:..:........:......:....:...........:...........:..x:....:........x:.:..x.x...:..:.....x..x.:......:...x....x....:x..:..x.....x.....x:.x..:..:..x....x.......:................x.....x.....:..............:.....x.....:...................... 11M3I277M 233/288 80.9% 291/94230402 0.0% 3/288 1.0% 130368609 59845946 +7996 chr4 + 190214555 176128736 176128735 176128866 131 AGATTCTCAAGTGGGTGTTTTACGCATTTGGAATGTTTCAAGAACAACACCTATTGATAATCTTAAATTAAAGAAAACAGGATTTCACTGCTTACATGTACTTAATTCTCCTCCAAGAAAAAAGTGTAAGT chr4 + 94230402 45758130 45758129 45758260 45758130 45758129 45758260 131 AGATTCTCAAGTTGGTGTGTTACGTATTTGGAATGTTTCACACACGACGCCTATAGATAATTTAAAATTGAAGAATTCTGGTTTCCATAGTTTGCATGTACTAAGTTCTCCTCCAAAGAAGAAGTGTAAGT ............x.....x.....:...............x:x..:..:.....x......:.x.....:.....xx.x..x..:..:x.:..:........x.:...........::..:.......... 131M 105/131 80.2% 131/94230402 0.0% 0/131 0.0% 130370606 59843949 +12628 chr4 + 190214555 176131536 176131535 176131763 228 TTTTTCTTCTATTT-TTAGTTTCAGTCCAATCTCCAACCAAAAATCATTATACATCCTCAACAAGCGAAGCAGTTCCACCCCCAACTTTAACACAGAATCAAGCATTTTCTCTTCCTCCTGGTCATGCAGTGTGTTGTTTCTTGGATGGTGGAGTTGGACTTTATGATATGGGAGCTAAGAAGTGGGATTTTCTTAGAGACTTGGTATGTATGTAGTCATTCCTTTATT chr4 + 94230402 45758588 45758587 45758809 45758588 45758587 45758809 222 TTTTTCTTTTGTTAAGCATTCTTGTTTCCATCTCCTATTAAATATTCTCATACATCCTCGACAAGTGAGGCTGTTCCTCCTCCAACTTTATCACAAAAACAAGCGTTTTCTCTTCCTCCTGGCCATGTTGTCTGTTGTTTCATGGATGGTGGTGTTGGCCTTTATGACATGGGAGCCAAAAAGTGGGATTTCCTTAGAGATTTGGTA-------AGTCTTTCTTTTTTT ........:.:..x-x:.x.:.::x.:.x......x.::...x..:x.:..........:.....:..:..x.....x..:.........x....:..x.....:.................:....:x..x.........x..........x.....x........:........:..:...........:........:......-------....x...:...x.. 14M1I192M7D15M 177/221 80.1% 222/94230402 0.0% 8/221 3.6% 130372948 59841607 +13087 chr4 + 190214555 176135056 176135055 176135304 249 AATAATGTGAATTTTCCTCAATAATTATGACTTTTTTATGCCATATTCCT----AGGGACATGTGGAAACTATCTTTGACTGCAAATTCAAACCTGACGATCCTAATCTTTTAGCAACAGCTTCATTTGATGGCACTATAAAAGTCTGGGATATAAACACATTAACAGCAGTGTACACATCCCCGGGTAATGAAGGTGTTATTTATTCCCTTTCTTGGGCTCCAGGTAAGAGATATTTTATTGAAATTAGGAA chr4 + 94230402 45759638 45759637 45759889 45759638 45759637 45759889 252 AAAAACATTAAGTGTAATAAATGGATTTGATTTTTTTTTATTTTTTTTCCTTTAAGGGACATGTTGAGACCATCTTTGATTGTGAATTCAAACCTGATAACCCTGATCTTCTTGCTACAGCTTCATTTGATGGCACGATAAAAGTTTGGGACATAAATACTTTAACAGCAGTTTACACCTCTCCTGGCAATGAGGGGGTTATTTATTCTATTTCTTGGGCTCCAGGTAAGA-ATATTTTGATTAAGGTATAAA ..x..::.x..x.x.xx.x...::x.x...:......x.:::x.x..:.:----..........x..:..:........:..::.............::.:...:.....:.x..x....................x........:.....:.....:..x...........x.....x..:..x..:.....:..x...........:x.....................-.......:x.x..:x..x:.. 50M4I177M1D21M 192/248 77.4% 252/94230402 0.0% 5/248 2.0% 130375418 59839137 +12059 chr4 + 190214555 176139804 176139803 176139984 181 AGAAAAGTAATACTTAGAAGAAGTAAATATATAAGAGAAAAAAGGGGTGAATTATTTCTTATTGATAGGTATTTTACATTTTTTGAAGCATGGAACAAATGGAATATTCTGCATTGCCTGGAGTCATAAAGATTCTAAAAGAATAGCAACCTGCAGCAGTGATGGTTTCTGGTAAGTACTA chr4 + 94230402 45762869 45762868 45763039 45762869 45762868 45763039 171 AGAAAAAAAACAC-------GAGTCAATAGATAAGAGAAAA---GGGTGAGTTATTTCTTATTGATAGGTATTTTGCATTTTTTGAAGCATGGAAAGAATGGAATCTTCTGCATTGCCTGGAGTCATAAAGATTCCAAAAGAATAGCAACCTGCAGCGATGATGGATTTTGGTGAGTGTTA ......:x..:..-------:...x....x...........---......:........................:...................x:........x.............................:.....................::......x..:....:...::.. 13M7D21M3D137M 152/171 88.9% 171/94230402 0.0% 10/171 5.8% 130376935 59837620 +7729 chr4 + 190214555 176141912 176141911 176142138 227 TCTGACTTTGTTTCCTTGAATAA----TGTATTTAGAGTATTGTTTTTCTATTAACATATTATAATTAATTCTAGTATTATTCGAACAATTGATGGTAAAGTGCTACACAAATATAAACATCCAGCTGCAGTGTTTGGTTGTGATTGGAGCCAAAACAATAAGTAAGTGGTTTTTTTTCCTGA-AATAAATAATAACTACATTTTGGAAATTTTAAATAACCATAAAGTTTA chr4 + 94230402 45763830 45763829 45764055 45763830 45763829 45764055 226 TCTGGCTTATTTGCATAGAATCAAACTTGACTTTTGGATAGCCTACTCATAATATTCTGTTGTAATTGTTTC-AGTATTATTCGAACCATTGATGGCAAGGTTCTTCACAAGTACAAACATCCAGCTGCAGTGTTTGGCTGTGACTGGAGTAAAAACAACAAGTGAGTGAAAAACAACCCTGATAATTAATATTATTTAC-TATTGAAA----TGGATTACCACCAACTTTA ....:...xx..x.x.x....x.----..xx...x.::..x:x.x:.:x..x..x:x.:..:.....:x...-..............x........:..:..x..x.....:..:.......................:.....:.....:x.......:....:....:xxxx:xx:.....-...x....x..x:...-.x...:..----.::..x....:x..x.... 23M4I45M1D110M1I16M1D8M4D19M 160/221 72.4% 226/94230402 0.0% 11/221 5.0% 130378082 59836473 +12822 chr4 + 190214555 176145986 176145985 176146176 191 ATATTTCAGAGACATGATAGCCACTGGCTGTGAAGACACAAATGTTCGTGTTTATTATGTAGCCACCAGCTCAGATCAACCATTGAAAGTATTTAGTGGGCATACAGCAAAAGTGTTTCATGTTAAATGGTCTCCTCTGAGAGAGGGAATTCTTTGCAGTGGTTCTGATGATGGGTATGTATTTTTGGATT chr4 + 94230402 45765574 45765573 45765764 45765574 45765573 45765764 191 ATTTTGTAGAGATATGATAGCTACTGGTTGTGAGGATAAAAATGTTCGTGTTTATTACTTGGCAACTAGCTCTGATCAACCACTGAAAGTTTTTACTGGACATACTGCAAAGGTGTTTCGTGTACGGTGGTCTCCTCTGAGAGAAGGAATCCTCTGCAGTGGCTCTGATGATGGGTGTGTATTTCTGAACT ..x..x:.....:........:.....:.....:..:.x..................:x.:..x..:.....x.........:.......x....x...:.....x.....:.......:...xx::.................:.....:..:........:.............:.......:..:.:. 191M 157/191 82.2% 191/94230402 0.0% 0/191 0.0% 130380412 59834143 +14001 chr4 + 190214555 176148127 176148126 176148359 233 TTTCAGTACCGTTCGAATCTGGGATTATACTCAGGATGCTTGCATCAATATTCTTAATGGACACACTGCACCTGTGAGAGGATTAATGTGGAATACTGAGATTCCATATCTGCTCATATCTGGCAGCTGGGACTATACTATAAAAGTATGGGACACTCGAGAAGGAACTTGTGTGGATACTGTGTATGATCACGGTGCAGATGTATATGG-------TAGAGTGTCTTTCATTCTTTCAT chr4 + 94230402 45766036 45766035 45766275 45766036 45766035 45766275 240 TTTCAGTACTGTTCGAATATGGGATTATACACAGGATGCTTGTATAAATATTCTTAGTGGACATAGAGCTCCGGTACGAGGATTGATGTGGAATCCTGAAATTCCATACCTTCTGATATCTGGCAGTTGGGACTATTCAATTCAAGTCTGGGACACAAGGGATGGAACATGCTTGGACACTGTGTATGATCATGGTGCAGATGTATATGGtaatatttaaaatatattttatttCTGTAT .........:........x...........x...........:..x..........:......:.xx..x..x..:x.......:.........x....:........:..x..x...........:.........x.x..xx....x........xx.:..x.....x..:x....:..............:.................-------..:.:.:.x...:...::.x:.. 210M7I23M 190/233 81.5% 240/94230402 0.0% 7/233 3.0% 130382091 59832464 +16594 chr4 + 190214555 176149751 176149750 176150182 432 ATAAAAAATATTTTTCAATGTT------CACTTTACTTAAAATAGGTTTTTATTTTCATCAGGTTTAACCTGCCATCCCAGTCGCCCCTTCACTATGGCCTCTTGCTCCCGTGACTCTACAGTGAGACTCTGGTCATTAACAGCCTTAGTCACTCCTGTACAAATAAATATTCTGGCAGACAGATCTTGGGAAGAAATTATTGGGAACACTGGTATGGAACATATACATGTATTAGAGTT-------------------TATTTCTAAATAAGT-TTTATGAGAAATCTTTTCTCACTGAATTATGTCTGTTCTTCAGATTATGCTATAGAACCAGGCACTCCTCCTCTACTGTGTGGTAAAGTGTCAAGAGATATTAGACAGGAAATAGAAAAACTAACTGCTAATTCTCAAGTGAAAAAACTAAGATGGTTCTCAGAATGTTTATCTGTAAGTATT chr4 + 94230402 45766274 45766273 45766714 45766274 45766273 45766714 441 ATTAAAATGACTTTTAAATATTTGACCACACTTT---TAAA------TTCTATCTCTGCTAGGATTAACATGTCATCCTAGCCGACCGTTTACTATGGCATCTTGCTCTCGTGACTCTACTGTGAGACTTTGGTCGTTGACACCGCTTATAAATCCTCTACCAATAAATATCTTAGCAGATAGATGTTGGGATGAGGTTATTGGTAATATAGGTAAGTAAATTGCATATGTAATTGTTTTGATGTTGTACATGTTACTGTACTTAAAATTATGTATGCATATGTAATTTGT--------AAATCTTTTTGTGTATTAGATCGTGCTGTAGAATCCGGTGCTCCTCCTTTGCTTTGTGGTAAAGTTTCCAGAGATATTAAGCAAGAAGTGGAAAAGATGATAGGAAATCCTCGAGGAGAAAAACTAAGGTGGTTTTCAGAATGTTTTTCAGTAAGTATT ..x....xx.:....x...:..------......---....------..:...:.:::::...x.....x..:.....:..:..x..x..:........x........:...........x........:.....:..:...x.x:.x:.x.x....x...x.........::.:.....:....x......x..::.......x..:.:x....x.x..xx.::.:.....x.x.xx..-------------------..:..xx..x..x..-.x:..:x.x...:.x.--------..x.x.x.:...x:x.:....::....:.....:.x..::........:.:..x...........x..x..........::..:...:.:.....:x.:.:x.xx...:...:..x::..........:.....:...........x..x......... 22M6I6M3D4M6D193M19I15M1I16M8D159M 303/415 73.0% 441/94230402 0.0% 43/415 10.4% 130383477 59831078 +9745 chr4 + 190214555 176150463 176150462 176150655 193 TTTAGCCTCCAGGTGGCAGTGACAATTTATGGAACTTGGTTGCTGTGATAAAAGGACAGGATGATAGCTTACTTCCTCAGAACTACTGCAAAGGAATAATGCACTTGAAACATCTGATTAAATTTAGAACAGTGAGTAAAATATGCAAATATGATGTACTCA-----AGCAAATTTTTTGCCTTTTCACTATTAAAAT chr4 + 94230402 45768387 45768386 45768582 45768387 45768386 45768582 196 TTTAGCCTCCAGGAGGCAGCAAAAATTTGTGGGATTTAGTTGCTGTAATAAAAGGACAGGATGATAGTCTGCTTCCACAAAATTACTGCAAAGGAATTATGCATATCAAACATCTTGTTAGATTTAAAATGGTAAGTGAAAGAT--AAATGTTATGTGAAAATTGTTAATAATCTATTTATTATTTCAGTCTTAAAAT .............x.....::.x.....:...:.:..:........:....................::.:.....x..:..:..............x.....:x.x........x:...:.....:..::..:...:...x..--....:.x....:xxx.-----.::..x:.x...:::x.....x.x....... 144M2D16M5I31M 146/191 76.4% 196/94230402 0.0% 7/191 3.7% 130382076 59832479 +11594 chr4 + 190214555 176151779 176151778 176151971 193 TTTTTTTAAATTCTATTTTCTTTTTAAAACCAGTCTGAAGCTCAAGAACTAACAACAGTCAAGATGTCTAAATTTGGTGGTGGTATTGGTGTACCTGCTAAAGAGGAAAGACTGAAGGAAGCTGCTGAAATCCACTTGAGATTAGGACAAATTCAGAGATACTGTGAACTTATGGTTGAACTTGGAGAGGTAA chr4 + 94230402 45769609 45769608 45769797 45769609 45769608 45769797 189 TTTCCTTAATTTACCTTTTTTTTT----ATCAGTCTGAAGCGCATGAACTGACAGCAGTAAAAATGTCCAAGTTTGGAGGTGGTATTGGTGCACCAAGTAAAAAGGAAAGGCTTAAAGAAGCTGCAGAAATACATTTAAGATTAGGACAAATTCAGCGGTATTGTGAACTGATGGTAGAGCTTGGAGAGGTAA ...::....x..x:x....:....----.:...........x..x.....:...:....x..:.....:..:.....x.............:...x:x....:.......:..x..:........x.....x..:..:..................x.:..:........x.....x..:............. 24M4D165M 154/189 81.5% 189/94230402 0.0% 4/189 2.1% 130382170 59832385 +3115 chr4 + 190214555 176152477 176152476 176152548 72 GCACCTCTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCCTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:...........::........x.xx.x...x::.:......::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 100119271 90095284 +5523 chr4 + 190214555 176156060 176156059 176156168 109 TTTTTGCCTTCTATTGTAGTGGGACAAAGCCCTGTCAATTGCACCAGGAGTCTCTGTGAAATACTGGAAGAAGTTAATGCAGAGGTAAGGCAGAGAGAGTCCGTGTTAA chr4 + 94230402 45770062 45770061 45770168 45770062 45770061 45770168 107 TTGCTGCTTTCT--TCTAGTGGGATAAAGCACTCTCAGTTGCACCTGGTGTATCGATGAAATATTGGAGGAAGTTAATGCAAAGGTAAAGTGATGAAAATACGTGCTGA ..x:...:....--.x........:.....x..x...:.......x..x..x..x:.......:....:............:......:.:::x..:.:.x....:.:. 12M2D95M 81/107 75.7% 107/94230402 0.0% 2/107 1.9% 130385998 59828557 +10448 chr4 + 190214555 176159982 176159981 176160137 156 TTATTTTATTAGGAGAGCTGACCAATTAATCCAGGAAGATAAGGATGATGTCATTCCATACTGCATAGCCATTGGTGATGTGAAAAAGCTAGTCCATTTTTTCATGTCAAGAGGTCAGCTTAAAGAAGCTCTGCTTGTTGCACAGGTAAAACCACA chr4 + 94230402 45770531 45770530 45770686 45770531 45770530 45770686 156 TTGTTTAATTAGGAGAGCTGATCAGTTAATTCAGGAAGAAAATGATGATGTCATCCCATACTGTATAGCTACTGGAGATGTGAAGAAACTAGTTGCTTTCTTTACTTCAAGAGGGCAGCTTAAAGAGGCTCTGCTTGTTGCACAGGTATTATTACA ..:...x..............:..:.....:........x..x...........:........:.....:.:...x........:..:.....:xx...:..:.:x........x...........:.....................xx.::... 156M 129/156 82.7% 156/94230402 0.0% 0/156 0.0% 130389451 59825104 +4246 chr4 + 190214555 176160832 176160831 176161012 181 TTGCTCAAAATCATATTCTGAAATGTGTCAATTATCAACAATTAGCTAAAGAATAATTCAACATTTAATTAAATTCTAGGCTGCTTGTGAAGGAAATATGCAGCCCTTACATGTTTCCGTGCCTAAAGGAGCTTCATATTCTGATGATATCTACAAGGAAGACTTTAATGAGTGAGTGATT chr4 + 94230402 45771627 45771626 45771795 45771627 45771626 45771795 169 TTGTTGAAAATCACATTAT------TGGTTATAATTGACATTT---TAATGAAT---CTGTCACTTTATTCTCTTCCAGGCAGCTTGTGAGGGAAATATGCAAATGTCACCGCTCTCCACGATGAGTGGATCTTCAAATTCTGATTTAAACAATACAGATGATTATAATGTGTAAGTTGTT ...:.x.......:...x.------..x:x..x..::...x..---...x....---:::x..:..x...xxx...:....x........:...........:x:x.:..xxx.:...::.x:x.:x...x.....x........xxx.x.x.:.x:..x..:.x.....x..:...x:.. 19M6D18M3D8M3D124M 112/169 66.3% 169/94230402 0.0% 12/169 7.1% 130389205 59825350 +7152 chr4 + 190214555 176162040 176162039 176162177 138 GTGTTTATATAGAATACACATTTTTTTCTTTCTAGACTCCTGCACAAAGTCAGTAAAGAACTGGCAGAATGGTATTTTCAAGATGGTCGAGCAGTACTAGCCGCATGTTGCCATCTTGCCATAGATAATATTGAGGTA chr4 + 94230402 45772540 45772539 45772677 45772540 45772539 45772677 138 GTGATTTTGCTGAGTTCATATGTTGTTAACTGCAGGCTTCTTCAGAAGGTCAATGAAGAACTGGCAGAATGGTATTTCCAAGATGGCCATGCAGTGCTTGCCGCATGTTGCCATCTGGCTGTTGAAAACATAGAGGTA ...x..x.::x..:.x..:..x..x..xx:.x:..:..:..x..x..:....:.:......................:........:.:x.....:..x.................x..::.x..x..:..x...... 138M 103/138 74.6% 138/94230402 0.0% 0/138 0.0% 130389500 59825055 +11909 chr4 + 190214555 176163126 176163125 176163322 197 TGAAGAAATTATTTTCTTATTGAGCAAGCTTGCTATGGCATACCTGATTCGCGGAAATGAACTGGAGTTGGCAGTCTGTGTGGGCACAGTACTAGGAGAGTCTGCAGCACCAGCAACCCACTATGCCTTAGAATTACTGGCGAGAAAGTGCATGATGATTTCAGTATGGTAAGAATTTTGAAATTCAAAGAATAATT chr4 + 94230402 45774160 45774159 45774356 45774160 45774159 45774356 197 TAATGATACAATTTTTTTATTGAGCAAGCTTGCAATGGCAAACCTGATTCGTGGAAATGAACTGGAGTTGGCAATCAGTGTGGGTACTGTCTTAGGAGAAAGTGCAGCGCAAGCAACACATTATGCCCTAGAATTACTAGCAAGAAAATGTATGACAGTAACAACATGGTAAGAATTTTTTACTCCAAAGAAGATTT .:.x..x.:x.....:.................x......x..........:.....................:..x.......:..x..x:.......:xx......:.x......x..:......:..........:..:.....:..:....:::.xx..::..............xx.x.:.......x.x.. 197M 157/197 79.7% 197/94230402 0.0% 0/197 0.0% 130388966 59825589 +7925 chr4 + 190214555 176168669 176168668 176168792 124 CAGGAATTTGGCAGCTGATCTTCTTCTGATGATTCCTGATAATGAACTACATTTAATAAAACTCTGTGCTTTCTACCCAGGATGTACTGAAGAGATAAATGACCTTCATGATAAGGTATGCTGA chr4 + 94230402 45777433 45777432 45777556 45777433 45777432 45777556 124 CAGGGACTTAGCAGCTGATCTTCTTATGATGATTCCTGATAATAAACTGCAGTTGATAAAACTTTGTGCTTTTTATCCTGGATGCACAGCTGAAAGAAATGACCTACATGAAAAGGTACAGTGA ....:.:..:...............x.................:....:..x..:........:........:..:..x.....:..x.xx..:.x.........x.....x......::x... 124M 101/124 81.5% 124/94230402 0.0% 0/124 0.0% 130391236 59823319 +8799 chr4 + 190214555 176172332 176172331 176172519 188 TTTGAATTTTAGTAACATTGTTTT--CAAATCAATTATTTTCTAGTGTAAGCTACCCACAGTGGAAGAATGTATGCAGTTAGCTGAGACAGCCCGTGCAGATGACAATATATTTGAAACTGTAAAATATTACTTGTTAAGTCAAGAACCTGAAAAAGCCCTTCCTATTGGTATTAGCTTTGTTAAAGGTA chr4 + 94230402 45778140 45778139 45778328 45778140 45778139 45778328 189 TTTAAATATTA-TAATAATGCTTTAGCAAAATCATTGTTTTCTAGTGTAATCTTCCTGATGTAGAAGAGTGTATGCGATTGGCAGAAACAACTGAGGCAGACGGTGATATATTTGAAACTATAAAGTACTATCTGCTAAGCAGTGAACCAGAAAAAGCTCTCCCTATTGGCATTCAGTATGTGAAAGGTA ...:...x...-...:.x..:...--....x:x...:.............x..x..::xx..:.....:.......::..:..x..:...:.:x:x.....:.:::..............:....:..:..::..:....:x:x.....x........:..:........:...x:x.x...x....... 11M1D12M2I164M 137/187 73.3% 189/94230402 0.0% 3/187 1.6% 130394192 59820363 +5776 chr4 + 190214555 176173247 176173246 176173383 137 ATCTGGTTTAATTTTT--CCAGAATACATCAGTAGCTCAGACTGGACTTTGGATACCATATACCCTGTTCTTGACCTACTGAGCTATATTCGTACTGAAAAATTACTCTTGCATACGTGTACTGAGTGAGTATTTTTTC chr4 + 94230402 45778386 45778385 45778524 45778386 45778385 45778524 139 ATTTTTTTCTATTTTTGAACAGAACAACTCTGTGGCTCAGATTGGACTTTAGATTCAGTCTGTCCATACCTCGACCTTCTAAGTTATATTCGCACTGAACAATTAATGTTGAATAACTGTACACAGTGAGTATGTTTTC ..:.xx..:x......--x.....:.xx..x..:.......:........:...x.x:.x.::..xxx:..:.....x..:..:........:......x.....x.x...x...xx.....xx.........x..... 16M2I121M 100/137 73.0% 139/94230402 0.0% 2/137 1.5% 130394861 59819694 +7878 chr4 + 190214555 176174570 176174569 176174722 153 ATGCCTCAAATTGTGGAATTTATAAAAATAAATA--TATTCTCTTTTAGAGCTCGAAATGAGTTGCTGATATTATGTGGTTACATTGGTGCATTACTGGCTATCAGAAGACAGTACCAAAGCATTGTTCCAGCACTTTATGAGTACACAAGGTAA chr4 + 94230402 45779413 45779412 45779565 45779413 45779412 45779565 153 ATGCTTGAAATCATT--ATTGTTCATGATTAATACTTGTTTGTTTATAGATTTCGGAATGAGTTGCTAATTTTGTGTGGTTACATCGGTGCTTTACTTGCTATCAGAAGACAGTACAATAGCATTGTACCTGCACTTTATGAATATACAAGGTAA ....:.x....::.x--...xx.x.x:..x....--.:..:x:..x....x:...:...........:..x..:...........:.....x.....x..................x.x........x..x...........:..:......... 15M2D17M2I119M 120/151 79.5% 153/94230402 0.0% 4/151 2.6% 130395157 59819398 +11495 chr4 + 190214555 176177025 176177024 176177660 636 TATCAGATGTTAATTTCCTTTTCA--CACGTTCAGTCAGCTATTAAAACGTCGGGAGGTGTCAGTACCTTTAAAAATTGAATATCTTTCTGAGGAATTGGATGCATGGAGAGCTTGCACACAGTCCACCAA-CAGGTGAGCAAATATGATATAAAAATTGGAATGCAGAAGGTATTTGATGTTATAGACAAACTTGTTGGAAGTATGTGTGGTCTCATTAATTTTAGCAGAATAATGAATCTTGATTTGTTTGGCATATATGCAGTAATAATTTACAATACCGTACTTTTCTGCCATGTAGTCCTTTGTTTTACTAT------AAATTAAGTCTAAAGGGATTTGTCTCCATCAATAAAGGGGAACTAAATAATCATCAGGGATAATTTCTAATCTAAACATCAAAAATTCTGTGATTCGACAAAATGAAATTTTGATATCTGTTGAAAATATAGATCATTAGAAGACTCTCCGTATACACCCCCTTCTGATTCACAAAGAATGATTTATGCAACTTTATTAAAGAGACTAAAAGAAGAGTCACTGAAAGGAATTATTGGACCAGATTATGTGACTGGATCAAATCTTCCAAGTCATTCTGATATTCACATTTCTTGTCTTACGGGATTAAAAATCCAGGTAAAG chr4 + 94230402 45780890 45780889 45781402 45780890 45780889 45781402 513 TGTTAGACTTGGACTTTATTTTCATTCCTTTTCAGTCAGCTTTTAAAAAGACGTAAAGTATCTGTACCGTTGAAAATCGAACAGCTGTCTGAGGAACTAGGTGCATGGAGAGCCTTCACTCAATCAACCAAGTAGGTGG--------------AAAAT-----------------------------ACAAACTT------AGTATG-ATGATTCTACTAACATT----------TAAATGTT-------TTGTTATGAATGCAATATTA-----------------TCTCCTTCATAAAATC-TTTATATTAATATTTTGAAAAGTTAATATTTTGTGGATGT---------------------------------------TAGTTTCCAAAACAAATTATAA----TGTGTGGCT-GAAAAAAAAAATTTTCTTTTTCTTTTTT---CACAGACCTACCAATGAATTGCCATGCACTCCACCATCTGAGTCACAGAAAAAGGTGTATTCAATACTGGTATCACGAATACAAGAGGAACCTCTGAAAGGAATGATTGGGCCTGACTACGTCACTGGATCAAATCTTCCCAGTCATTCAGATGTTCACATCTCTTGTTTGACAGGGCTAAGGATACAGGTACAG .:.:...:x.x:.:..:x......--.x:x...........x......x.x..x:.:..:..x.....x..:.....:...:.x..x.........:.:.:............:.x...x..:..x.....-:.....:--------------.....-----------------------------........------......-:..:.:::.:...:x..----------.:...x..-------...x:..:x.....:..x..-----------------.:..:x:...:x.:..-...:.x...x...------..:....xx:.xx:x....x.---------------------------------------..:....:..xx:...:xx:..----.x....::.-..x....x:..x...:xx.x...x..xx---:.:...:.xx:x:.x..x.:x..:.::..x..x..x.....x.....:.:..x.:.x...x...:x:.:x..xx:x..x..x....:..::.x...........x.....:..x..:..:..x.................x........x...:.......:......:.x..:..::...::..x......x.. 24M2I105M1I7M14D5M29D8M6D6M1D17M10D8M7D20M17D16M1D13M6I21M39D22M4D9M1D28M3D195M 351/504 69.6% 513/94230402 0.0% 141/504 28.0% 130396135 59818420 +9330 chr4 + 190214555 176179416 176179415 176179594 179 AATTTATAATCTCATCTTCTCTTTCCTCAACTCTCACTG----TGCAGGGCCCTGTGTTTTTCCTTGAAGACGGGAAATCTGCTATCTCCTTGAATGATGCTTTGATGTGGGCAAAGGTGAATCCATTCTCACCTTTAGGGACTGGAATACGACTCAATCCATTCTGATAGAAGATTTTTGTC chr4 + 94230402 45782960 45782959 45783142 45782960 45782959 45783142 183 AATACACTGTCTTTTTCTTTCTCTCTCCAAATATTTCTGCTGTTCCAGGGTCCAGTGTTCTTCCTTGAAGATGGAAAATCTGCAATTTCACTGAATGATGCTTTGATGTGGGCCAAAGTGAATCCGTTTTCACCGCTAGGAACGGGAACACGACTTAACCCATTTTGATGCAGCATTTTCCTC ...x:.:x:...:x.::.:...:..::...x.x.:x...----.x.....:..x.....:...........:..:........x..:..x:......................x..:........:..:.....x:....:..x....:......:..:.....:....:x.:x.....:x.. 39M4I140M 134/179 74.9% 183/94230402 0.0% 4/179 2.2% 130396456 59818099 +3187 chr4 + 190214555 176182376 176182375 176182434 59 ATGAAATATATATATGTGCGTGTGTGTGTGTATATATATATATATATATATATATTTCT chr4 + 94230402 29797136 29797135 29797194 29797136 29797135 29797194 59 ATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTT ...:x...:...::.:.........:......x.........:.:.:.x.x.x....:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 146385240 43829315 +3154 chr4 + 190214555 176182389 176182388 176182453 65 ATGTGCGTGTGTGTGTGTATATATATATATATATATATATATTTCTATGAAATTGTCCAGATGTG chr4 + 94230402 83657514 83657513 83657578 83657514 83657513 83657578 65 ATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAAATGCTATGGATATG ....x:..x........:............x.x.x.......x.:..x.....xx.x::...:.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 92524875 NA +3782 chr4 + 190214555 176200126 176200125 176200216 91 TGCACCTGTGGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATTGCTTGAACCTGGAAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....x...:..:.........:.:.........x.xx.x...x::........::....x.xx:..:..:..------..x..x...... 73M6D12M 63/85 74.1% 85/94230402 0.0% 6/85 7.1% 100166921 90047634 +3126 chr4 + 190214555 176210763 176210762 176210835 73 TTCTCTTCTTTCTTTTTCTTCTTTT---TCTCCTGCTTCTTTCCTTTCTCTTTCGTTTCTTTCTTCTTTCTTTCCT chr4 + 94230402 11447173 11447172 11447248 11447173 11447172 11447248 76 TTTTGTTCTTCTTTTTCCTTTTTTAAAATCTACCTTCTCATCTGTTTCTCTTTCATTACTTTCTTCTTGCTTCCCT ..:.x.....::....:...:...x---...x.:x::..x.::x..........:..x..........x...:... 25M3I48M 53/73 72.6% 76/94230402 0.0% 3/73 4.1% 164763590 25450965 +9749 chr4 + 190214555 176215522 176215521 176215738 217 TATTTTTATATGAACTATTCCTTAAGCAAAAG-------AAATAGAAATTTTGATTTTCAAGGTATTTAGAATTACTTTACTGTTTTATCGATACTGTAAGAAATTCTTCAGTAACGTTGGCAGCTGGAGTTGTGGGATAAGGTGCAATCTTGGTTTTCCTATGTAGCTTCGGATACAGAGTCGGCAAAGTTGGTAAAGAGAGCTTGGGGTAGCTACAAGAAGA chr4 + 94230402 45793237 45793236 45793459 45793237 45793236 45793459 223 TATTTTCCGCCCAGCAGTTCTTTAGGTAAAATTTACAACAAACAGAAGACTTGTTATTCA-GCTTTCTAAAGGTTAATTATTATGTTATCTATACTGTAAGAAATTCTTCAGTATTGTTGGCAACTGGAGTTGCGGGACAAGATGCAGTCTAGCTCTTCCTATGTAATTTCGGATACGTAGTCGACAAAGCTGACAAAGAGAAGATGGCGTGGCTGCAAAAGAA ......:xxx:x.:.x:...:...:.:....x-------...:....:x:...x.x....-.x.x.:..:.:x.xxx...:.:.x.....x.......................x:.......:.........:....:...:....:...x.x.:..........::.........:x.....:.....:..::.......:xx...x..:...:...:.::. 32M7I21M1D163M 157/216 72.7% 223/94230402 0.0% 8/216 3.7% 130422285 59792270 +11186 chr4 + 190214555 176216801 176216800 176217054 254 ACATGTATTTTTCTTACCTTCATGTTGAAGCAATATCCTTTCCACCATACTGCTAGACGTAGCTACATCTATAGGTCGCAGAAGCTCTGTATTTTTGGCATTGATATCTGCTCCAAATTCTAGCAGTAAGTTTACAATTTCTGTGCTGGATTGTTGAGCAGCAGCATGTAATGGAGTATCCCAATATTTGCCTTTCTGTACGTCAGCACC-----TACATGTAATACGGAGTGAAGATAAATATAAATAAAAGTTGTTA chr4 + 94230402 45794531 45794530 45794788 45794531 45794530 45794788 258 ACATACATAAAGCTTACCTTCGTGGAGGAGCAGCAGTCTCTCTACTAAACTGCGTGGAGCAGCTAAATCAACAGGCCTCTCAAAATCTGTGTTTTTGGCATTTATGTCTGCCCCAAATTCCAGGAGTAAGTTTACAATCTCTGTACTTGAATGCTGGGCAGCAGCATGCAGTGGAGTTTCCAGATGCTTTCCTTTCTGCACATTGGCACCTGGCATGCACACAAAGAGATGTAAAGA-AGAGATTAATTACAGTTGTCA ....::..xxxx.........:..xx.:....::.x:..:..:..:.x.....xx.:x.:.....x...x.:...:.x.xx..:x.....:...........x..:.....:........:..x..............:.....:..x..x..:..:...........:.:......x...x:..::..x........:..:.::.....-----.:..:::..x:x.:x..:....-.:.x..x...x.x......:. 210M5I22M1D21M 181/253 71.5% 258/94230402 0.0% 6/253 2.4% 130422270 59792285 +3021 chr4 + 190214555 176217121 176217120 176217192 72 TCAACTCTATTTGTTATGAGTTATTTCTTTATATACATATACAGTATCTACATACACATATATGCCTCATAT chr4 + 94230402 25449372 25449371 25449443 25449372 25449371 25449443 72 TCAGTTCTTTTAGTTACGAGTTTTTGCTTAAAATACATTCACTACTACTACATACATATATTTACTGCATAT ...::...x..x....:.....x..x...x.x......x:..x::xx.........:....x.:.:x..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 150767749 39446806 +17898 chr4 + 190214555 176221140 176221139 176222435 1296 TTTAAAGGA--AAATACCAGCATAAAGAAGCTTCCAGATGCAATGGAATTGCTGTGACATACAAGCTACATAGAGAGGAGTTCCCAAATGAGGAATTTCTTGGTCAACATCTATGCCCCAGGATATCAGGATGTCAAGACATTCATGGTGACCTGCCAACACAAAGTAGAGGAGT---TTAACTTAA-------TGCCCATCCACCCCACACACCTCACCCCAGGCTTCCCTTGTGGTGTCATTCATTGAAAGATCAACAGAGCACTGCAGGTTGCTAAAGAAACTTTCTTCCCTTGTCACTTAATCCCAGAACTAAGTTACCTTTACTGGCGGCCTCATGCGTTGGGGATGGAAGACATGACTCCAGCTGGGCTTTGGCACCATACTCCAGAAGCAGCTCTGCACAGCTTGGACTGCCTTGGGAGCATGCGTTGAATAACGGAGTCACGCCATCTATCGTGATTGCATTTACCTAAACCAAACCAAAATATCCA---AACATAAGATTCATAAGTCATACATGAGTAACCGACTTAGGCATTGTCAAAAGGTATGTGATTTGCTAACAGAAAT-------------------ACGTAGGAAAATG-----TGCACATTAAATATGACAAAGTATACTTTGCTCTTATGCATTAACAAGAAAAGCTGTAAAACAGACAGAAATATGATATGGCAGATAATTCATTGGAATGGGCATAAAACTAGTGGAAATCATGAAAAAATGCATGCTCAAATGGCAAATAAGATCTAATTCAATGATTAGATACTTTTCAGTAAGAGTAAAAATGAAGAAAAAAGTGTAATGATGATGAAGTTGTAATGAAGCCACATTGCTAGTTTAAAGTGGTAAAATTGGTAGTTCTAT---------TTCTGAG---ACTTTATTTAAGGAAAATCATCCAAA-----AGATGGGCAAACG----------TTATAGACCTAAAGATGTTCATCGATTG-CTATTTACAGTCATGAAAG----CAGGAAATAACCTACAGAATA-GTCTATATTATGATGCAGCATGC-TACCCATTTATGCAATGATTGGAAATCCTTTTTAGAGTGCAATAAGAAGACTAAGGAATTCAAGAGCTTTATTTTTATTCTGCTATTTTTGAAA-----------------------ACTACCGAGAATGAAGGAAAGAAAA--------GTAAAATGAGAACTCTGTTGGAT---TCCCTCC---GTCAGTAGATGTTA--AATGA--TTAATGTTTTGAAAGGTACTTACATTAGCTCCTGCTTCCAGCAGAGTTCTGGCACATGCCACGTGATCTCCAAGGCAGGCTTCGTGCAATGGGGTGACATGGTCTAAGGTTACTGCATTTACATTATAACCCTAAATGTGGCATAA chr4 + 94230402 45796526 45796525 45797775 45796526 45796525 45797775 1250 TTTAAATAATGACATACCTGCATAAAGAAGCTTTCGAATACAATGGATCTGCTGTGACACACATGCTACATATAGAGGTGTTCCTAAATGAGGAAGGTCTTGGTCAACATCTATACCCCAGGATATCAGTACCTCCAGACATTCACTGTGTCCTGTCAGTACAAAGCATAATAGTTGGTTGACTTCAGTAAGTTGGCTCAGACAAAATGGGACCCATTTCCTAACACTACATTATTGAGATATTTGTCA---------------ACTGCTTGTCTGTTGAGAA------------TGTAATTTC--------------TTACCTCTGCTGGCTGCTTCATGAGTTGGTGATGGAAGACAGGACTCCCACTGAGCTTTGGCACCATATTCTAACAAGAGCTCAGCGCATGCTGCGCTGCCTCTCGAACATGCGTTAAATAAAGGTGTCACTCCATCAATTGTTGTAGCATTTACCTAAAATATATAAA---ATCCAAGTAACAAAAGAATTGAAAG------AAAATTGGCTCTTTT---CACTGATACAAAAAATGGAATCCTATTGTAGTAATGGGAACCTTCTCTCTGTAGATTTAGCAGACTGCAAGCTTCATATTAAATGTG----GGAATTATTTGCCCTTCTGTGTT-----------------------------TTTAATCT--------CTCTGTTGGAGTGGT-----ATTTCATGGA----ATGAGACAA-------------GGCTAATAGG------------------------------GAGAATGATGA-GAAGCAAAAATTGTGATGATGCTAAAG-------GAAGGAACACATGTATTTGGAGAGGGGAATCTCACCTATCCTTTACATGCATCCTCTAAACCCACTCCAACCATGAAAAGCACTACAAAAATTGAGATACGAAAATAAAGTTTGTTCTTATAGATTTGTATATAGT-ATCTATAGAATCCTTGCACTAGCTGAAGTGGACAGAGACTGCTTTTTGGAACACATCTGTGTTCTTA-----CATACACACTTAATTAGCCCTTGTTTCATTTTTTCATTTAACCTAACATCTCTATACTGATGCTTCTTTGAGCCATAACTTTCCTTTGCTAGCTTTCAGATGGCAGCTTACTGTAATTAAATGAATGTCATCAATAGAGTACAGAGAAATACCAATGTAAAATAAATAAATCAAGGAATATATCCTTCCCAGATAAACCAAAGTTAGCATTGGACTTCATATACAAAAACACTCTTACATTTGCTCCTGCTTCAAGAAGGATCCTTGCACATCCCACATGATCTCCCAGGCAGGCTTCGTGAAGTGGAGTTACTTGGTCAATAGTTAGTGTGTCTACATTGTAACCCTAAACAAGATATGA ......x:.--.x.....x..............:.::..:.......x:..........:...x........x.....x.....:..........xx.................:..............x.:x..x.........:x...x....:..::......:.x.:x...---..:....x.-------x..:..xx..xxx::x:xx..x:x:..:.:xx:.x.x..:.x.x.x:...::.::---------------.....xx..:xx.x:....------------...x.:..x--------------......:.:.....x..:.....x.....x...........x......x:...:..............:..:.:x.:x.....x..:..xx:..x:......:xx..:........:.....x..x.....x.....x..:..x:.x.............x:.x.:x..---.....---....x....x.::x...------.x:.x.::.:xx:..---..:..x:.x..::x...x:..::xx.x::..x...-------------------.:x...x.:.x..-----.x..:.......:..----:.x..xx.....:...x..::..-----------------------------.x.:..x.--------x.:::.....:...x-----.x:.x:....----....:.x..-------------...x....:.------------------------------:...:.:.x:.-....x.....x...:......x.:...-------....xx...:xxx..x..x:.::x..x..xx.::x:x:.:..x.---------:...:.:---...::.x::.x.:...::xx.x....-----....:x.x...::----------.......::.:x.x..:x.-...x..x.-x.x:..:..x.x::x:...----...::.x.:x::.x::...:.-:...:.:..x.x.-----...:.-:..::.x...xx.xx..x..x:xxx.:::x....:xx.:xx..xxxx.x...:.x.xx.::xx....:x..x:...x:.:.....x:...x.:.-----------------------.x.::.:xx...::..x.x...:..--------.......:.:x.xx:::xx.:..---...:...---:.x.::x:.x....--.x..:--..x..:.x:x:...x::x........x...........x..x..::.:..x......x....:........x..............x.:...:..x..x.....x.x:....x..::.:......:..........::x.::..:. 9M2I164M3I9M7I55M15D19M12D9M14D169M3D5M3I17M6D15M3D35M19I13M5I15M4D23M29D8M8D15M5D10M4D9M13D10M30D11M1D27M7D44M9I7M3I26M5I13M10I19M1D8M1I19M4I21M1I13M5D5M1I94M23I25M8I23M3I7M3I14M2I5M2I146M 746/1136 65.7% 1250/94230402 0.0% 274/1136 24.1% 130424614 59789941 +5774 chr4 + 190214555 176225258 176225257 176225355 98 TTACCTGTGATAATAATGTTCTCAGAGCAAGAAGGCGACCTTGACTTGCTGCTTCATGTAGTGGTGATCGATCTGCCCAGGAACCTGTCAAAAAAGAA chr4 + 94230402 45798901 45798900 45798998 45798901 45798900 45798998 98 TCACCTGCGACAATAAAGTCTTTAGAGAAAGAAGACGTCCTTGACTGGCTGCCTCATGCAGAGGTGAGCGATCTGCCCAAGAACCTATGTAATAACAA .:.....:..:.....x..::.:....x......:..x........x.....:.....:..x.....x...........:......:.xx..x..x.. 98M 77/98 78.6% 98/94230402 0.0% 0/98 0.0% 130426357 59788198 +4371 chr4 + 190214555 176227595 176227594 176227736 142 TCACCCTGATCCTTTGAGGTTGGCGCTATTATTATCTCTGTTTTCCAGGTGAGGAAACTGAGACATGCAGAAGTTAAATAACTTGCCTAAGGTCACACAGCTAGAAAGGGGTGGATGTAAAATTCAAA---CTGCAGCCTCCTAC chr4 + 94230402 82283090 82283089 82283224 82283090 82283089 82283224 135 TCACAAAGTTCCTTCAAGGTTAGCATTGT-ATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAGG---------ACAATTCAGAAGTCCCCAGTCTCCTGC ....xxx.x.....::.....:..::.:.-.....xx:::...:x:.x:..:........:....::x:x.::....:.:...x:...............:...x:...---------.x......:.---.:x...:.....:. 29M1D79M9D10M3I14M 90/132 68.2% 135/94230402 0.0% 13/132 9.8% 93944505 NA +16486 chr4 + 190214555 176237210 176237209 176237783 574 CAGTTTAAAGTTAGTATTTGCAAAAACAGGCCAATGTGGTTTATTTCAGGACACTGACAGATTTGAAATGGCTGCTATACTAACCTTGACTGGTCAGAATACCCCAGCTAGCTTTTCGTTTAGAAGAACATTCCTCTATACTCACTAGCCTTCTTTTCGTGAGGACCTGCTTAATGCAGTTCATTTCAACAGCAATATCTGCGGACATAGTTTGGTTGACGTTTTTTGTCTGTGACAACCAGG-TGTCATAAGTGCAAATGCTCTAGCAAGAAGAAATATCAGCGTCTGGATTTCTAACTATTTTTTCCTTCCCTTCAGACTTTCACAAAGGTTCCT-GTGTGCTAACT-TGAGATGTCTTCAACATTGAACTCTATTCAGAAACACTTG--GATCAGGGCTGGTAGGTGCAATGTGGAGGATGGGCCAGAAATGCTGGAGCATTTTCTATTTTTAAAGCAGAGACAT----------GCTGCAGCCGGAAGTCTTTAACTATTTGTGTGATATAGAAAGTAAAAAGTGGGTATAATTGCTTTTCCTAGTCGAAACAGAATAGAAATGAGCTCTATCGTTAAAAGATAA chr4 + 94230402 45806584 45806583 45807135 45806584 45806583 45807135 552 CAGTTTAGAGCAAGAATATCATAAATTGGGTCAGTTTAGCATATTTCAGTACAGTT-----TCTGAAATGGCTGCTTTACTAACCTTGGCTGGTCAGAATACCCCAGCTAGATTTTCGTTTCGCAGGACACTCCCCTATACTTTCTAGGCGTCTTTTGGGGAGATTCTG---------GCTCCTCTGAACAGCAGTGTTTGTTGTCATTATTTG----------TTTCTCGAGGAAAGCCTGTCTGTCATTGGTGCAGGTGCTGTGGTCTGACG-AACATTCACAGATGGATTTCTAATACCTTTTTTTCTCCTCGCGGTTTTTCACAAAGACTCTTCTTGTACTTACTGTAGAATGGCTACAACACTGAAATCCATTCAGTAACATTTACTAGCTTGGACTAGTGAGAACATAGTGGGGGAAGGG-AAGGATTGCTCTAGCATTTTCTATTTTTAAAGCAGAGAAAGAATCAGCTTAGCTACAGCATGA--CTCTTAACTATTTACACAATTT---AAATGGAAAGAATGTGTTATT-TTTTCAATAATTAAATCAAAAAAGAAACAGATTC-----TTAAAGCATAA .......:..:x..x..x.xxx...x::..:..:.x.:.:x........x...x.x-----.:.............x...........:......................x.........x.x..:...:...:.......:x....x.x......x.x...:x:...---------.:..x.:.x.......:.:.:..:x.x...x:....----------...x..x:x..x.:..x.x-......x:.....::....x.:.:xx..x.-..:..:x:.:xx...........:xx:.....:::...::x.:.x:..........::..:.-x...:..x...-.:::...x..x.....:....x..:......x....:..:--::::x..:..:..::.x:..xx....:...x...-x..:.x....xx..........................x.x----------...:....xx..--:::..........:::::..x.---..:.::....x:x..:.x...-:...:xx..:.::..x..:..x.....:::::..-----.....:x.... 56M5D108M9D36M10D19M1I30M1D62M1I11M1I40M2I34M1D41M10I12M2D22M3D21M1D34M5D11M 373/537 69.5% 552/94230402 0.0% 52/537 9.7% 130430626 59783929 +3096 chr4 + 190214555 176251422 176251421 176251491 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 100218225 89996330 +3015 chr4 + 190214555 176260630 176260629 176260691 62 ATGCAGCTGATAATGTTTTGTTTTGTTGTTGCTGTTGTTTGTTTTTGTTTGTTTGTTTTGTT chr4 + 94230402 59675222 59675221 59675283 59675222 59675221 59675283 62 ATGCATCATACTGTATTTTGGCATACTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTT .....x.xx.:x:.:.....x:x.::.....:.......xx..................x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 116585408 73629147 +3164 chr4 + 190214555 176260644 176260643 176260705 62 GTTTTGTTTTGTTGTTGCTGTTGTTTGTTTTTGTTTGTTTGTTTTGTTTTTTTGAGACGGAG chr4 + 94230402 64178427 64178426 64178488 64178427 64178426 64178488 62 GTGTTTGTTTGTTGTTGTTATTGTTTGGTTGGGTTTTTTTTGTTTGTTTTTTTAGGATGAAG ..x..xx..........:.:.......x..xx....x...xx...........::..:.:.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 112082217 78132338 +3396 chr4 + 190214555 176260648 176260647 176260700 53 TGTTTTGTTGTTGCTGTTGTTTGTTTTTGTTTGTTTGTTTTGTTTTTTTGAGA chr4 + 94230402 32184178 32184177 32184230 32184178 32184177 32184230 53 TGCTTCTTTGTTGTTGTTGTTTGCTTTTGTTTGTTTGTTTCTTCTTTCTAAAA ..:..:x......:.........:................:x.:...:.:.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 144076470 46138085 +3016 chr4 + 190214555 176260653 176260652 176260705 53 TGTTGTTGCTGTTGTTTGTTTTTGTTTGTTTGTTTTGTTTTTTTGAGACGGAG chr4 + 94230402 89314586 89314585 89314638 89314586 89314585 89314638 53 TGTTGTTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGGGAAG ........xxx..x...x.x......................x....:x.:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 86946067 NA +20139 chr4 + 190214555 176268892 176268891 176269295 404 AGAGGATTATCATAAACATACCTTGTCCTTGGGTTACTCCATAAAATTCAGCTGCTATCCTTGCCGCTTCCTTGCGGTTGCCTTTCACTATGTAGAAATGACTGAGGATGGCAAGGCTGATTTTCACAAAAAGCTTAAAACAGAACAGCGAAAGTATTGTAAAGTAGACATTGGATAATTGTTGAGCAAACGGCCGATTTTCTTCTAACACCGACATTGCTGCAGAAGAATCTGCGGCGGTCTTTAGTTGGATCCAAGTCTCAAATGTGCC------------TGGCTCTCGTCCGGGATGCTCCTGAACAGCTGGTCCTGAGGAAAGAAAATATCAGCTGGTAGTGATGCCTACAGCTCAAAA---------TATTTATACACTCCATAA----AAGTTCTTCGCAAACTCCTATTGGTCTGAAAATA chr4 + 94230402 45817228 45817227 45817651 45817228 45817227 45817651 424 AGATAGTAAATATAAATATACCTTGTCCTTGTGGAACTCCATAAAATTCAGCAGCTATCCTTGCTGCTTCTTTACGGTTCCCTTTTACAATGTAGAAATGACTAAGTATAGCAAGGCTGATCTTCACAAAGAGTTTAAAACAAAAAAGAGAAAGTATAGTAAAATAGACATTGGATAGCTGCTGGGCAAAAGGGCGACTTTCTTCTATGACAGTCATTGCTGCACGAAAATCTCTCTCGGTGTTTGGGTAGGGC----TCTCAAATGTGTTGATAAGATCATATGGCTTCAGCCACGCACTCTTGGGAACAACTGGTCCTGAGGAAAGAAAATATCAGCTGGTCATGATGCTTGCTGCTCAAAATATGAGGATTATTTATACTGTACATAGTATTGAGTTCACTAC-CACTCCTGCTAGCCTGGCAATA ...x::.x.x:.....:..............x.xx.................x...........:.....:..:.....x.....:..x..............:..x..:...........:........:..:........:..x..x........x.....:.............::..:..:.....x..x...:.........xx..x.x..........x:.:.....x:xx....x...:.x.:.:x.----...........::------------.....::x.:.xx.x.:x..:xx.....:...............................x:......:.:.x........---------.........xx.x....:----:.....x:::.-x......::.:.:...:x.... 254M4D13M12I81M9I18M4I11M1D22M 311/399 77.9% 424/94230402 0.0% 30/399 7.5% 130451664 59762891 +3183 chr4 + 190214555 176288193 176288192 176288252 60 TTCCTTCTTTTTCTTTCCTCTTTCTTTTCTCTTCCTTTCTTTCCTTTCTTTCTCTTCTTT chr4 + 94230402 69568213 69568212 69568272 69568213 69568212 69568272 60 TTCCTCCTTTGTCTCTCCTCTGTCTCTTTTCCTCACTTCAATCTTTTTTTTTTTTTTTTT .....:....x...:......x...:..:..:..x:...xx..:...:...:.:..:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 106719980 83494575 +3592 chr4 + 190214555 176290324 176290323 176290382 59 GCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.............::........x.xx.x...x::...........:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 100257118 89957437 +6757 chr4 + 190214555 176322154 176322153 176322259 106 TTATCTTTATTCCTAGAAAAAATGTAGAAGATTTCACTGGACCTAGAGAAAGAAGTGATCTGGGATTTATCACATTTGATATAACTGCTGATATCCTTTAAGAAAA chr4 + 94230402 45830020 45830019 45830125 45830020 45830019 45830125 106 TTTTGTTTTATCTTAGAAGAAATGTAGAAGACTTCACTGGACCTAGAGAAAGAAGTGATCTGGCGTTCGTCACGTTTGACATTACTGCAGATATCCTTAATGGGAA ..x.x...xx..:.....:............:...............................x:..::....:.....:..x.....x.........x.x.::.. 106M 87/106 82.1% 106/94230402 0.0% 0/106 0.0% 130492134 59722421 +7614 chr4 + 190214555 176324162 176324161 176324265 104 TTTTCCTTAATTTACTTACATCTAGAGAATATATTTGATTGGAATGTTAAGCAGTTGTTTCTTTATTTATCAGCAGAATATTCAACAAAAAATAATGTAAGTAT chr4 + 94230402 45832642 45832641 45832745 45832642 45832641 45832745 104 TTTTCCTTAATGTGCATACATCTGCAGAGTATATTTGACTGGAATGTTAAACAATTGTTTCTATATTTGTCTGCAGAATATTCAACAAAAAACAATGTAAGTAT ...........x.:.x.......:x...:.........:...........:..:........x.....:..x....................:........... 104M 91/104 87.5% 104/94230402 0.0% 0/104 0.0% 130491520 59723035 +3307 chr4 + 190214555 176324375 176324374 176324473 99 AAGCCAGTGGAGGTAGCTGTGTTATGAAAACATTTGATCTTTTG-----GGAGCCTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTCTGTTTGTTCTATTT chr4 + 94230402 73459769 73459768 73459871 73459769 73459768 73459871 103 AAGAAAGAGGAGGTGGGAATGTAGTAATAA-ATTTGAGCATGGGAAGAAGGCATTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCTCACCATCTCATTCTATTT ...xx..x......:.xx:...x:.:.x..-......x.x.xx.-----..x:::.............................x.:x:.xx:.::........ 30M1D13M5I55M 70/98 71.4% 103/94230402 0.0% 6/98 6.1% 102864606 87349949 +9606 chr4 + 190214555 176327124 176327123 176327308 185 TCTGATGAGTTATCTAATTAATTTTCATTTTAATA-------TAGGCTCTGAACCAAGTTGTCCTATGGGACAAGATTGTTTTGAGAGGTGATAATCCGAAGCTGCTGCTGAAAGATATGAAAACAAAATATTTTTTCTTTGACGATGGAAATGGTCTCAAGTGAGCAATTC---------TTGGTCATTTTTTTACATTT chr4 + 94230402 45833789 45833788 45833988 45833789 45833788 45833988 200 TCTGAGAAGTGATCTTGCTAATTT-AATTATAATTGTATTTTTAGGCTCTGAACCAAGTGGTTCTTTGGGACAAGATCATTTTGAGAGGAGATAATCCAAGGCTGTTCTTAAAAGACATGAAGTCAAAGTACTTTTTCTTTGATGATGGAAATGGTCTCAAGTAAGTAAATCACTTTGTTGTTGGTTGTGTGTTTGTTTTT .....x:...x....x::......-x...x....x-------.................x..:..x...........::..........x........:.:....:.x:.:.....:.....:x....:..:...........:...................:..:..x..---------.....::.x.x...::x... 24M1D10M7I130M9I20M 147/184 79.9% 200/94230402 0.0% 17/184 9.2% 130493335 59721220 +12408 chr4 + 190214555 176328121 176328120 176328378 258 ATCTCAGTGTTTGTCTTAAAATTTTTTTTGAACTACTAGTGTCTCTGATGACTTGTGTTTATTATATCTTTTTATAGGGGAAACAGGAATGTCACTTTGACCCTGTCTTGGAACGTCGTACCAAATGCTGGAATTCTACCTCTTGTGACAGGATCAGGACACGTATCTGTCCCATTTCCAGATACATATGAAATAACGAAGAGTTATTAAATTATTCTGAATTTGAAACAACATATTTTTATACTT----------AATGAATTGTAT chr4 + 94230402 45834286 45834285 45834543 45834286 45834285 45834543 258 ATGTTAGTATTTGTTAGGGAAATTGGTT---AATTTCAGTACTTATGCTGATTT----TTCTTTCATGTTTTTGCAGGGGAAACAGGAATGTCACTTTGACGCTCTCCTGGAATGTTGTACCAAATGCCGGCCTTCTACCTCTTGTGACAGGATCAGGACATATGTCTGTACCTTTCCCAGATACCTATGAAACAACAAAAAGTTATTAAATTATAATA---CCGAAGCAACATATTTTTATACTTGTATATTGTGAATAAATTTTAT ..x.:...:.....:xx::..x..xx..---.x.x::...:::.x..x...:..----..x..x:..x.....::..........................x..x..:.....:..:...........:..xx............................::.:.....x..x..:........x.......:...:..:..............xx.:---::...:..................----------...:....x... 28M3D23M4D161M3D24M10I12M 195/248 78.6% 258/94230402 0.0% 20/248 8.1% 130493835 59720720 +3416 chr4 + 190214555 176334648 176334647 176334696 49 CACACACACACACACACACACACACACATATATACATATATATATGTTT chr4 + 94230402 74526077 74526076 74526125 74526077 74526076 74526125 49 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ..............::x...:.....x........:.......:.:... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 101808571 88405984 +3268 chr4 + 190214555 176341365 176341364 176341455 91 TCTAACTTTGTGGGGTTTTTTTTTTGTTTGTTTGTTTTTTTAGTTTTT-AGAACATGAGACACCTTCTCACTCTGTCACCCAGGCTGCAGTG chr4 + 94230402 79198866 79198865 79198954 79198866 79198865 79198954 89 TTTAGTTTTGTGGGGGAATTTTTTTATTTGTTTGTTTTTCTAATTTTTGACAAAGAAAGAAACCTCCC--TTCTG-AATCCAAACAGCAGTG .:..::.........xxx.......:.............:..:.....-.x..x:x:...x....:.:--:....-x.:...::.x...... 48M1I19M2D5M1D16M 65/88 73.9% 89/94230402 0.0% 4/88 4.5% 97142499 93072056 +3163 chr4 + 190214555 176379534 176379533 176379603 70 CATTGTGGCAGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:x....::x...--....:.:...........::........x.xx.x...x.:........::.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 100346337 89868218 +6137 chr4 + 190214555 176383358 176383357 176383704 347 ATTGATTTTTTTCCGTGACTGTTTTTTAGTCCTGAGAA--AGGGAAATGATGCAGGAGGAGATGGTGAGAAAAGTTAAAAGAAACAATGG-GTTGAGTCACAGTGCAAGGCTCTGTTTCATAGATTCCCATGTACAGCAAAAATGCTTGTAGAGGGAGATGAGAGGGAA--------AAAAGCCCAAGCTG-ATTTCAAAAATACTGTAGTAGCCAAGAAGAACGTTTGAATTTTAAAAAGCAAAATGAATGTCCACGTCATTACATACTGCCCCATTTCCTTGAA-----TTATGGCCGTGTG---------AAATTGATTTCTGTGTAGATTGGATTCACTGGCAGTTTCCTTTCCTACAAAGTCCCACAG chr4 + 94230402 45844209 45844208 45844557 45844209 45844208 45844557 349 ATAGATTTGTTTCCATTACTATTGCTCATTCATGAGAACAAGGGAAATGATGCAGGATGAGCTGGTGAGAAAATTTAGAGGAAACAATAGTAATGACTCACAACTGAAGCCTGTGCTTTAGAAATTCCCACCTTTCA-AAGAAGGTCTGCTAAGGAAAACTCAAAGCAATGTTCCAGCAAAGTCAAAATTATATTGAAGAAACACTATGG----CATGCAAAGCATT--GTTTTCAAAGAGGCAAACCAATCTGC-------------TTGCCTCTTTTCTTTTGAAGTTTTTATAGGCTGATGGAATGCTAAAAATTGTTTGCCTGCTACATTGTCTTCAGAGACAAT----CTTTCTTTGAAGACTTACAG ..x.....x.....:.x...:..x:.:.x..x......--.................x...x...........x...:.:........:.-:x...x.....::xx...x..x..:..:.x.:.......:x.x:x:-..:..x.::..:x:...:.:.:xx:.:.x..--------x....:.x..::.:-...xx.:...:...:.:.----..x.x.:.:.:..--:x...:...:..xx...:x...x.x.-------------:....:.x....:..x:.-----....:.x.xx:..---------......x..x.:xxx..x....xx....xx.:..:.----:..:..x::...x.::.... 38M2I50M1I46M1D31M8I14M1I18M4D13M2D26M13D18M5I13M9I36M4D20M 214/323 66.3% 349/94230402 0.0% 50/323 15.5% 130539149 59675406 +3104 chr4 + 190214555 176414534 176414533 176414582 49 CTTGTGTGTATATATATATATGTGTGTGTGTGTGTATATATATTTTTCT chr4 + 94230402 23063165 23063164 23063213 23063165 23063164 23063213 49 CTTGTAATTATATATATATATATGTGTGTGTGTGTATTTTTTTTTTTTT .....:xx.............:...............x.x.x.....:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 153351369 36863186 +8503 chr4 + 190214555 176424532 176424531 176424781 250 TGAAAAAGTAAACATCGTCTAATGCTTGCTCAGACA---TTAAGGTACATAGG-----------AGTGATTACCG-AGCGTGTCTGCTTTCCTACCTACCAAATGCTAAATCTATTAG-TATTTCCTGGTATTCTTCTGAATTTTGAATACTGTTCACATAAATTAAAAAGACCAACATACAGAGAAATTTATGTCATTTTCCCCCTATTAAAAATATAGGCTAGATAAGGTAATGGAATAGCAATAAAA-ACTCTTTTTCATAAAA chr4 + 94230402 45853496 45853495 45853757 45853496 45853495 45853757 262 TGGAAAGGTAAATGCTTTCTCCTGCTCACTTAAACACTTTTAATATAGCTAAGGTGCAGCCTTCAGTGATTAGCATGGTATTTCTTGTTTCCTAGAGACCAAGTGCTAAGTCTATTAGACATTTCCTGCTATTCTTTTGAATTGTAAATACTATTCTTCTAAATTGAAAAGGCCAGCGTGGGGAGATACTCATGCAATTTCCCATGTATTGAAGATGTAGATTTGA-----GAATGGAGAAACAATAAAATGAAGTTTTTCATAGAA ..:...:.....::::x...xx....::..:.:...---....x:..xx..:.-----------........x.:-:.::.x...xx.......xxx.....:......:........-:........x.......:......x.:......:...x:x......:.....:...:.:.:x:....x.:.:...:x....:..x:x....:..:..:...::.x..-----x......:x.:........-:xxx.........:.. 36M3I14M11I11M1I42M1I107M5D19M1I16M 174/245 71.0% 262/94230402 0.0% 22/245 9.0% 130571036 59643519 +3475 chr4 + 190214555 176434667 176434666 176434799 133 GAGTGCTTCTAGCTTTTTATTTTTCTTCTTCCTTCCTTCTTTCATTCCTTCCTTCCTTCTTTCATTCCTTCCTTCCTCCCTTCCTTCCTTCCTTGTTCCC--TCCCTCCCTCCCTTCCTTCCTCTCTTCCCTTCT chr4 + 94230402 63697103 63697102 63697235 63697103 63697102 63697235 133 GAGTACTCCACAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTC--TTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....:..:.xx:xx:......::...:...:.:xx:x.:..::x..::..:.:..x.....::...:.xx:...:x..--..xxx:.:..x...x...x.--..::..:.....:..:..:..:......:..:. 78M2D20M2I33M 80/131 61.1% 133/94230402 0.0% 4/131 3.1% 112737564 77476991 +10040 chr4 + 190214555 176443874 176443873 176444182 309 TCATTTTTTTCACCTCATTTTAGGGAGCTGGTTTGGATTAAAGTCACATACAAACTGAGCCATCTCCAACATCTACATCAGGAAGTAACTCTAACTCAAGATAGAGGTCACTGGAGGGGCAACAGGTTTGTATTGCTTATTCTGGCTTCTCTTTTCGTGTACTGGAGATCATTTGGAAGAGCTACCAGTGACTGACCCTTTATAAGCATTATATTTTGAAATAAAAGCGATTGCTTGCTCATTAGCACTTCCCTTGATGAAGTATACAAGTGTCAGGTAAAACAAACTGAATCCTGCTCATGATGGATT chr4 + 94230402 45858947 45858946 45859224 45858947 45858946 45859224 278 TTGTTGCTTTCATTCTGTATTTGGGAGCTGCTTTGGAGTGAAGGGGCACAAATAATAAATTGCCTCTGACATCTGCAGAATGCAGTAGCTGTAACTCATGGTAGAGGTCACTGGTGGGACAGGAGGTTTGCATTGTCT--------CCCCCTTTTCCT----------------------GCTGCCAGTCATTTACTTTTTATAGGCATTAACTATTAAAATAAAAATAATTGTACA-TTATAAGCACTTCCTTTGATTAAGTATACAAATGCCTTTTAAAACAAAGTGAACTAATTCTATGACTGATT .::..x:.....:::::.x..x........x......x.:...xx:..:.x.x.x.:.:::::...::......:..xx.x.x....:..x.......x.:.............x...:..:x.......:....::.--------::.:......x.----------------------...:.....x.:.x..::......:......xx.x..:........:::....:x::-.:..x.........:.....x..........:..:.xxx.........x....::xxx:::....:x.... 138M8D12M22D57M1D71M 191/278 68.7% 278/94230402 0.0% 31/278 11.2% 130584927 59629628 +3464 chr4 + 190214555 176463109 176463108 176463232 124 ATCTGAAAAGACACCTTATTAAATACTACAAATGGAAAATAATCATATGAAAAGATGCTAAACATTTCTCATTAGAGAATTACAAATTAAAACAACAATGAGATTTTTTTTTCTTTTTTTTTTT chr4 + 94230402 60827163 60827162 60827278 60827163 60827162 60827278 116 ACCTGAGAAAATGCTTGCTTA----CTGAAAAAAAAAAACAAAAACAAAAAAC----CTCATCACTCTGCATTGGGGGGTTTCAAATTAGATGAACAAAATGATTTTTTTTTCCTTCTTTTTTT .:....:..:.::.:.xx...----..:x...x::....:..xx.:.x:...x----..x.x..:.::x....:.:.::..x.......:.xx.....x:x............:..:....... 21M4D28M4D67M 77/116 66.4% 116/94230402 0.0% 8/116 6.9% 115635946 74578609 +3893 chr4 + 190214555 176479571 176479570 176479750 180 AAGAGAAAGAAGA--AGAGAAAGAGGAATAGGAGGAAGAGGAGGAAGAGGAAGA----------GGAGGA-----------AGAGGAAG--AGGAGGAAGAGAAAGAGGAGGAAGAGGAAGAGGAGGAAGAGAAAGAGGAGGAAGAGGAGGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAT chr4 + 94230402 8397369 8397368 8397572 8397369 8397368 8397572 204 AAGGGAAAGAAGACAAAAGAAAAATGAACAGCAGGAAACTAATTTGCAGAAATACTCCTACTCAGGAGAAGCACATCTTTTAGATAGAGCCAGAAGGAAGTGAGAGAGAAGGACAAAGTGGAGAAGGATGAATGAGA-CAAGAGCAAGAGGAAAAAATAAAGCACAAAAGATGTGGGGCAGAAAGAAGCCAGGAAAAAGGGGAGT ...:.........--.:.....:.x...:..x.....:xx:.xxx:x..:..x.----------....:.-----------...x::..--..:......x..:....:....x:.:.x:...:....x..:x:...-x.:..:x.:......:..:x.:..x.x:..::.x:x.:..x....::.::xx.....:...::..:. 13M2I39M10I6M11I8M2I46M1D67M 115/179 64.2% 204/94230402 0.0% 26/179 14.5% 168082202 22132353 +3507 chr4 + 190214555 176479641 176479640 176479743 103 GGAAGAGAA------AGAGGAG-GAAGAGGAAGAGGAGGA-------AGAGAAAGAGGAGGAAGAGGAGGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAA chr4 + 94230402 9535376 9535375 9535492 9535376 9535375 9535492 117 GGCAGAGAACCTCGGACAGGAGTGAAGAGGAAGCTAATAAGTACATCAGAAGATGAGCATCTAGAGGAGGGAGAGGCAGAGGAAGAAGAAAATAAGAAAAGAGAATTAAAGGAAAAA ..x......------.x.....-..........xx:.x:.-------...::.x...x.xxx........:...:.x.............:.x:..:..::....xx.:.....:.. 9M6I7M1I17M7I70M 76/103 73.8% 117/94230402 0.0% 14/103 13.6% 166944265 23270290 +3299 chr4 + 190214555 176486798 176486797 176486871 74 GCGTACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGTGGCACAGGTTTTAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:..x....:.:...........::........x.xx.x...x.:.........:.:x.x:x::..:.x... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 100453594 89760961 +3011 chr4 + 190214555 176506509 176506508 176506545 37 GTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTA chr4 + 94230402 12568758 12568757 12568794 12568758 12568757 12568794 37 GTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTTTTA .....x.........................x..... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 163937751 26276804 +3733 chr4 + 190214555 176513679 176513678 176513751 73 TGCACCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCGCTTAAACCCAGAAGGTGGAGGTTGAAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:x.:........x.xx.x...x.:...:..........x.xx:..:..x.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 100480474 89734081 +3436 chr4 + 190214555 176524927 176524926 176525013 87 TAGCACTACTATTATTTTCATTTTATAGATGAGGAAACTGAGATACCAAAATGTTAAGTAACTTGGTAAAGGTCACTCAAATTGTGA chr4 + 94230402 82283110 82283109 82283195 82283110 82283109 82283195 86 TAGCATTG-TATTATAATCATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGA .....:.:-......xx......:...x...:........:..:..x::x.x:......:...x:x:x........x..:x.x.... 8M1D78M 61/86 70.9% 86/94230402 0.0% 1/86 1.2% 94241817 NA +3282 chr4 + 190214555 176540061 176540060 176540155 95 TTTCTTTTCTTTTTTTC-------TTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGA-AAACAGGAAAAGAGTGCCCTTC-----TGTGAAAGAAGAA chr4 + 94230402 49716932 49716931 49717039 49716932 49716931 49717039 108 TTGCTCTGCTTTTGTTTGATAGCATTTCACTTTTTTTTTTTTTTTTTTAAGGGAGAAAAGGAAAAAATTAAAGGGAAAAGGACATCATATAGCAGTGTGAAAAAAGAA ..x..:.x.....x..:-------....x:....................:::.:....::....:.-x..x:.......:::::.x.x:-----.......:..... 17M7I43M1I22M5I13M 69/95 72.6% 108/94230402 0.0% 13/95 13.7% 126823129 63391426 +3396 chr4 + 190214555 176540065 176540064 176540133 69 TTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTT--TAAAAAAAAAAAAAAAAAGAAAACAGGAAAAGA chr4 + 94230402 90767876 90767875 90767946 90767876 90767875 90767946 71 TTATTTTCCTTTCTGTCTTTTTTCCTTTTGTTCTGTACTAAAAAGAAAAAAAGAAAAAAAAAAGGAAGTGA ..x.:..::.....x........::....x..:.x.--......:.......:...:....x.....:x.. 36M2I33M 53/69 76.8% 71/94230402 0.0% 2/69 2.9% 85772189 NA +3085 chr4 + 190214555 176540068 176540067 176540119 52 TCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAG chr4 + 94230402 91196604 91196603 91196655 91196604 91196603 91196655 52 TCTTTTTTTCTTGCTTGTTTTCTTTTTCCTTTTCTGAAGCAAAAAAAGAAAG ............x...x....:.....::....:x:..:x.......:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 85343464 NA +3476 chr4 + 190214555 176540068 176540067 176540133 66 TCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAA--AAAAAAAAAAAAAAAGAAAACAGGAAAAGA chr4 + 94230402 66237245 66237244 66237312 66237245 66237244 66237312 68 TTTTTTTTTTTTTCTACTTTTTTTTTAATTTTTCAAGTGAGAGAAAGAAAAGAAAAAACAGGAAAGAA .:.......:.....x:.........xx.....:..--:.:.:...:....:.:...........::. 36M2I30M 51/66 77.3% 68/94230402 0.0% 2/66 3.0% 110302823 79911732 +3043 chr4 + 190214555 176540078 176540077 176540132 55 TTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAGGAAAAG chr4 + 94230402 29232119 29232118 29232173 29232119 29232118 29232173 55 TTTTTTTTTTCTTTTTTTTTACTTCCAATATAAAAAAAGAAAACAACAAGAAAAG ...:......:.........x:..xx..x.x.......:..:.x....:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 147307959 42906596 +3233 chr4 + 190214555 176540078 176540077 176540125 48 TTTCTTTTTTTTTTTTTTTTTTTTA--AAAAAAAAAAAAAAAAGAAAACA chr4 + 94230402 20896415 20896414 20896464 20896415 20896414 20896464 50 TTTATCTTTTTTTTTTTTTTTTTTAGGGAAAAAAAAGAAAAAAGAAAGCA ...x.:...................--:........:..........:.. 25M2I23M 43/48 89.6% 50/94230402 0.0% 2/48 4.2% 155643663 34570892 +3303 chr4 + 190214555 176540079 176540078 176540149 71 TTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAGGAAAAGAGTGCCCTTCTGTGAAA chr4 + 94230402 72072690 72072689 72072760 72072690 72072689 72072760 71 TTCTTTTTTTTTTTTTTTTTTGAAAGCACATAAAAATCATGCAAACTTGGGAAAAGTGCCTTTCTCTGAGA .....................xx..:x.x.x.....xx.x.x....xx.::..:......:....x...:. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 104467389 85747166 +3213 chr4 + 190214555 176595147 176595146 176595221 75 TATGTAACTATCTATGTGTCTATACACACACACACACACACACACACACACACATACACATAAACACACATAATT chr4 + 94230402 7596587 7596586 7596661 7596587 7596586 7596661 75 TGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTT .:..x..:...xxx.x...:.....x:.:.x.........::....x.:x..:...:...........x.x.x.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 168998560 21215995 +3062 chr4 + 190214555 176599972 176599971 176600052 81 TGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATGTGTGTATATTCTATGGTGTGTGTATATATATATGGTGTG chr4 + 94230402 85834541 85834540 85834621 85834541 85834540 85834621 81 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTG .....x.:.................xx..:..x::...:..:...:x...:x:xx.x:..:::::...:.:.:....:x.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 90765431 NA +3034 chr4 + 190214555 176600036 176600035 176600139 104 TATATATATATGGTGTGTATATATATATGTGTATATATATGTGTGTATATATATATGGTGTGTGTATATATATATGTATTCTATGGTGTATATATATATATATA chr4 + 94230402 11533562 11533561 11533665 11533562 11533561 11533665 104 TGTATATATACAGGGTAAATATATATGTGTGTGTGTATATGCCTCCAAATACGTATTTTTACTATATATGTACTTGCAGACGTTCGTGCAGGTGCACGCATGCA .:........::.x..:x........:.....:.:......:x.x:.x...::...xx.xxx.:.....:..:x..:.xx.xx.x...:.x:.::.:::..::. 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% 165066474 25148081 +3180 chr4 + 190214555 176612327 176612326 176612397 71 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTTTTTTTTTTTTTTTTTTTTTGACACA chr4 + 94230402 33250994 33250993 33251064 33250994 33250993 33251064 71 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACA ..x.x.x.x.............:.:.:.....:.:.:.:x:......x...x.....x..x....xx:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 143361333 46853222 +3075 chr4 + 190214555 176623867 176623866 176623929 63 TATTTTATATATATATATAGAGAGAGAGAGAGAGACTGAAAATGGTAGAAAAAATAAAAAAGA chr4 + 94230402 84631449 84631448 84631511 84631449 84631448 84631511 63 TACTATATATATATATAGAGAGAGAGAGAGATACAGTGACTATGTCAGACAAAACAGGAAGAA ..:.x............x.............x.x.x...xx...x:...x....:.::..::. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 91992418 NA +14934 chr4 + 190214555 176635690 176635689 176636221 532 AGGTCTTATTTTAACTATTTGATCCTAAGAGTAGGGATTTCTCAGCACAATATAATTGTGACAAA-GCACTTGCTCTGACGCAGAAGCTGTTGACCTGGTTGGTGCCAAGGC-CAACTTTGAGCAGATTTCCTGCGAGCAGATGGGTCAAGGAAAGTTTTTCACTGATGAGTAATTTATTTAATATTGCCACATT-GCCCTCCTC----CTTTTCTGGGAGTGCCGTTAACAGAAT---------------GCTCCCTAGACTTGCCTGAATGACATTCACTGCCCCAGTGTGAGAATATTATTATTATTATTATTAT-TTTGTATAGGATAGGTTTGCTTGTTAAG---GATGTTTTGTTATTTCAGCAGCCTTCAAACATGTAATAAATAAATTTCCCTTGGGTTGGCCCTTCC-TCTCATTTCCTGAAGGAGGAGCTGATTGTTC-TCACAGCTCCCCTGGGATATTTCAGGCCGTCTTCAAATGACTAAAGTGATGATGACGTCATTC------CCTTGTGCACACCATTCACGTAGAGAACCCGGGGAAGGTCATTTATAG chr4 + 94230402 45893933 45893932 45894488 45893933 45893932 45894488 556 AGGTCTTGTTTTACACATC-AACACTGGGAATCAGGATTTCCCAACACAACGTGGTCACAAAAAATGAATTAGCACTGACGCAGA-GCTCATGACCTCCTTGGCGCCAAGGGGCTGCATTTAGCTAATTTCCTGCAAGGATATAGTTCAAGGAAAGTTTCTCACTCATGCATAATGTAATTCATATGATCACATTTGCTTTTCTTTTAACCTGTATAGCATTGACtttaaaaaaaaaataaaataaaaaaagtttttaataCCTACATGAATACCATTCCCTGTC------TGAAAATAAGATT--TAATTCCATTGCCTTTGTATATGCCCCGTTTGACAGTTAAGTCCAACTTTTTGTTATTTCAGCAGACTTCAAACGTGTAATAAATAAATTTCCACTGGGTTGGCACTTCCTTTTTGCTTCCTGGTGTAGGGATTGATTGTTCTTTGCATGTCTCTTGGGATTTTATAAGCTTTCTCAGAATGACTGACTTGACCACAGATTCAACCATCATAATTTTCAGAAATGGTTCACACAGAAAATGCAGTAGAGGCCATTTTTAG .......:.....xx:..:-:.:x..::..:.x:.......:..:.....::.::.::::.x...-.x.:.x..x..........-...xx......xx....:.......x-.x:.x..x...x:.........:..x.x..:.x.............:.....x...x:....x..x..x....x::......-..::.:..:----.:.x.x.:.x.x..x.x....x.:..x---------------.:.:::x.x..:.:.x.....:x.....x...:.------...:....xx...--..x.x::...::-........x.x:xx.....x:x......---:.:x.................x........:..................x:.........x.....-.:.:::......:x.x...:::.........-.::..xx..:.:......x..x:.:..:x...:x:.......:.xx...:x.:::xx...x:.------x:..x::x.x.:x:.....::...:..:x.:.x::...:.....x... 19M1D45M1I19M1D26M1I82M1I9M4I27M15I34M6D13M2D12M1I28M3I66M1I31M1I63M6I48M 356/522 68.2% 556/94230402 0.0% 44/522 8.4% 130741757 59472798 +3823 chr4 + 190214555 176652593 176652592 176652666 74 GCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGATAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...........::........x.xx.xx..x...........:.:..x.xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 100619389 89595166 +3249 chr4 + 190214555 176672105 176672104 176672175 71 CACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGTTTGGACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.........:.::........x.xx.x...x.::...:....:.:..x:xx:..:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 100638898 89575657 +3246 chr4 + 190214555 176672198 176672197 176672267 70 ACTCCAGCGACAGAGCAAGACTCTGTCTCAAAAAAACAAACAAACAAAAAAAAAAAACAAAAAAAAAAAA chr4 + 94230402 61374619 61374618 61374687 61374619 61374618 61374687 69 ACTACAGGGAGATGGCTGGAACCT-TGTTAAAAAAACAAACAAACAAAAAAAAAACACCAAAAAAAGTAA ...x...x..x.x:..x:..x:..-.x.:..........................x..x.......:x.. 24M1D45M 54/69 78.3% 69/94230402 0.0% 1/69 1.4% 115297579 74916976 +3060 chr4 + 190214555 176672213 176672212 176672259 47 CAAGACTCTGTCTCAAAAAAACAAACAAACAAAAAAAAAAAACAAAA chr4 + 94230402 69834626 69834625 69834672 69834626 69834625 69834672 47 CACGGCTGTTTCTTAAAAAAACAAACAAACAAAACAAAAAAAAAAAA ..x.:..x.x...:....................x.......x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 106837587 83376968 +3099 chr4 + 190214555 176672228 176672227 176672262 35 AAAAAACAAACAAACAAAAAAAAAAAACAAAAAAA chr4 + 94230402 66953679 66953678 66953713 66953679 66953678 66953713 35 AAAAAACAAACAAACAAAAAAAAAAAGCAAAAAAA ..........................:........ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 109718549 80496006 +3136 chr4 + 190214555 176682334 176682333 176682387 54 TGTAGTCCCAGCTACTCGAGAGGCTGAGGCGGGACAATGGCTTGAACCCAGAAG chr4 + 94230402 76033211 76033210 76033264 76033211 76033210 76033264 54 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:.........:..:........x.xx.xx..xx:.............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 100649123 89565432 +20176 chr4 + 190214555 176683519 176683518 176684053 535 ATGGACTGAAC----TTAGCAGCTTATAATACAATTTTCATTTTATTTTAAACATATTTTGCATGATATAAAAATATTGATCACAGTGAGTTTTACCAATTGTTGTTGCTATAAA-AATGAATGCAGAAACAATATTTTTAGTGGAAATAAATTATATAGTCATTCT---TTTAAAGAAATCACAAGAGG-AAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAG-ATGAGCTCCAGTCCATTTCTGTA-AAGTTATCCACATGGTTCAGGAAAGACAGACT---TTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTT-------------CCATAATAGAAAA-----TCGATGAACTGGAAAACAGTACAATCTTAGC----TCATTTGTGGTCTTTTCCAATATGAAGGGACACAACGACACACTTCTTCACTATATGAAAATCCTGGCTCACAAGCCTTCTGGCGGTTCGTACATGGCCGTCTGTAACAGCTAGGAGAACAAA chr4 + 94230402 45904930 45904929 45905486 45904930 45904929 45905486 557 ATGGATCAAACATTCTCATCATTATATAATACAATTTCCATTTTATTTTAAACATACTTTGCATGATATAAAAATATTGATCACAGTGAGCTTTAACAATTGTTACTGCTATAAACAAAGGCTGC----ACAATGGTTTTAGTGGAAATAAATTATATAGTCATTATCTCTTTAAAAAAATCACAAGAAGTAGAACCTAGGCTGTTTGGTCATTGGCAGAAAATAAGTCCTTACTGAGTTCTTTATAAAACATGAACCCCAGTTATTTTCTACATTTGCTTTCCACGT--TTTGAGAAAAGCACAATGTGTTTGTCTCTGAAAGC-----CCCAC-AGGGTCTCT-GGTGAACATTTAATTCCAA-GTATTTGCAAAGTTTCTGTTGTTCTTTTGTTCTAATGGAAAAAATGTACACCAAAATAGCAAGTAGTGCTTTCTTCGCTAATTCATCAGTGGTCTTTTCCAATATGTGGGTACACAGCGGCACACTTCTTCACTAAAATAAAATCCAGCATCACAGCGTTTTGTTCGGACTGTACATGGCGGTCTGTAACAACTGAAAAAGTAAA .....:::...----.:.x..x:x.............:..................:.................................:....x........::.........-..x.:x...----.....:x.............................x.---......:...........:.-.:..:..x........................:x....:....x:::xx.:..x.:x.:-....:.:.....:xx.....::.-xx.:.x.....:.--..:::....::..x.x.---.......:..xx...-----.....-.........-x..xx...xx:.:...:.x-..:x:x:..x.....:-------------::x....:.....-----x.:x::..x.:.x..::...:.xx....x..----....:x..................x:..x.....:..:...............x.xx.......x.xx.....:xx:..:xxx...x::.........x..........:..:::.:.::... 11M4I100M1I9M4D38M3I20M1I59M1I23M1I13M2D17M3I15M5D5M1D9M1D19M1D16M13I13M5I31M4I123M 394/521 75.6% 557/94230402 0.0% 50/521 9.6% 130778589 59435966 +23985 chr4 + 190214555 176687177 176687176 176687944 768 GATCTCTTACCTGCATGTTTGGTGGTGGAACTTCTTTCCTTTTAACAAGCATTTCTGTGGACTTTCTGTACATTCACAGGCACATTTTCCAGGATTTAGGGGTTGATTTCTGGGGCAGGTTCTTTTACATACACACTGGCATGTGTTTTCATCAAATTCTCGGTTGGCCCCACATTGGCTGGGGAAGAGTTTGTTTTTACAGACACACTGGCATGAGTTTCTGTCTAGTTCTTTGTGGGGTCCACAGCTGGCAGGCCGAAGCCCCGCTCTGCAGACACACTGACAGGTCTCTTCATCCAGCTCCTTGTTTGGTCCACAGATGTCATGGAATCCATCTGTTGAGTCTAGACAAATAGTCAGAGAATCTTTACTAT-------ACCTTACTTGGTTCTG-------GGTGTGGCATGAAACAAAAGCTTTTAAAAGCATCTTCCTTTTGTATGTTTTCCATCAAAGGATTGGGTACAAACATGAGTATGTTCCTTTATAAAGGA---------GTTCAAAATAATACCAACGTGAAGTAGAAAATGTACTATTTTTTAGTCACTTATTTAGAAGAATGATGAATATTATATGTGTGGTTTTAATATTAGAGTATGTTAATCACAATATAGACCCCTGGCGTTTAGTCTTTAAAGCATCATTCTGCTTACC---ATCTCCAGCATCCGAGGAAAACATAAAATCTTCCTGAGCCAGGCATCTGCAGATGTGATTATTCCACATGTAATTGGTGGGGCAGGTCTTGTTCGCTGCCTGACACCT-TTGGAAGAAACAGAC chr4 + 94230402 45907055 45907054 45907776 45907055 45907054 45907776 722 GAATTCTTACCTGCACGTCTGGTGATGAAATCTTTTTCCTTTTAAGAAACATTTATTGGGAGATTCTATACATTCACAGATGCATTTTGCAGGATTTAGCGGATGATGTTTGGGACAGGTCTTTTTACATACACACTGGCACTTTTCTTCATCAAATTCTTTGTTGGGCCCACAGGAAGTGGGGAGCAGTTTGTTTTTGCACATGCACTGACATGATGCCCTGTCTAATTCTTTGTGAGAGCCACAGCTTGAGGGCCGCACATCTCCTTTGCAGACACACTGACAGGTTTCTTCATCCAGCTCTTTGTTGGGCCCACAAAT---ATGGAATCCTTCAGACGTGTCTGGAAATGCAA-CAGAGAAGTTGCACAATTATCAGAATTTTGTCTTCTCCTACTCTTCTATTTTTACGTGAAAAAACAACATCCAA----TTCATACTTCTCGAGGTATTTCA-----------GGAACAAGTATAAAT-----------CAAAAGACCAGCAATGGTCTGTAATACTACAAA--TAAAGACAAA--------------TAACCATTTAACCAAA-----------------ACTTATAATTTCTTCTTTAG-----GCAAATCAAAATATGGAACT---ACATTTAATCCTCTAAGCAAAA--CTACTTACCAGAATCTCCAAGGTGAGAAGAGAAACCAAAATCATGCTGTGCCAAGCATCTGCAAATTTGATTATTCCAGATGTGATTTTTTGGACAGGTCCTGTTTGCCACATGACACCTATTGAATGAAATATAC ..x:...........:..:.....:..:..::.:...........x..:.....x.xx...xx....:...........:::......x..........x..x....x.:....:.....::...................:x.x.:.............:x.....x......xx::x......:x...........:..x.::.....:.....xx::.......:.........:.:x........x.x:.....x.xx:.:x..:...................:..............:.....x..:.....:..---.........x..x.x:.x....:..x.x::.:-.......x:.x:..x..-------.::..:::.xx.:..:-------:x.x.x:.:.....x..x.:.x.::..----x..x.x...:.xx.x..x..:..-----------..x....::..:.:.-----------:...:..---------..:::x....x...x..--.:...xx:..--------------..::..:...x::.:.-----------------.:x.:.::...:xx:x....-----.:x.....x.....:..x.:---:.:....:..:.:x.....xx.--..:......---.......:x:.xx..:..:..xx:......x.x...x....:.........:..x...........x....:...xx.x..:......:....:..::.x........-...:.x....:.x.. 321M3D32M1D17M7I16M7I27M4D23M11D15M11D7M9I17M2D10M14D16M17D20M5D20M3D22M2D9M3I108M1I15M 499/695 71.8% 722/94230402 0.0% 100/695 14.4% 130780122 59434433 +14078 chr4 + 190214555 176711426 176711425 176711680 255 TAACTTATGTTTACTTGAAAATAATTTAATATTAGTAGAGGATGCAGAAAAAATAGATTTAATTCATACTCACTGTGGTAGTGTTGCTGGCAGGGAACGTCTAATAATGGAATGAACTTGTCTGTAAACATCCAGTTTAGACATGCATCGGCAGGAAGTGTGATTGGCAAAACTGATTGTTACTGGTTTGGGGCCTTGAGAGAGAGGCACTGTAATTTCAAATAACTACAAAGAAGGGA---CAAAAAGAAGAAAAAA chr4 + 94230402 45911401 45911400 45911648 45911401 45911400 45911648 248 TAATTTATATTTAATTACATAGGCTTTTCTTATAATGT--------GAAAGGAAAGACAAGTCTCATACTTACTGGGTTTGTGTTGCTGGCAAGGAACGTCTTATGATAGAATGAACTTGTCTGTAAACATCCAACTTAGACATGCATCGGCAGGACGTGTGATTGGCAAAACTGACAGTTACGGGTTTGGGGCCATGAGAGAGAGGCACTGTAATCTCAAACAACTAC--AGAAGGGAAAGCAAAGAGAAGAAAAGA ...:....:....x..:x.x.x:x...xx.xx..:.:x--------....::.x...:xx:x:.......:....x.x.x............:.........x..:..:.........................::....................x...................:x.....x...........x....................:.....:......--........---....:.........:. 38M8D183M2D8M3I16M 201/245 82.0% 248/94230402 0.0% 13/245 5.3% 130800025 59414530 +3503 chr4 + 190214555 176720705 176720704 176720770 66 GTGGTGCACACCTGCAATCCCAGCTACTTGGGAGGCTGAGGCAAGATAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .........:--..:.:.:...........::........x.xx.xx..x.............:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 100687504 89527051 +15818 chr4 + 190214555 176727755 176727754 176728007 253 TAGCAGGAATGGGCAATACCCACCGTCTTGCTGAGGTAGCTCGTGCTGGTGTTCATGCACTGCAGCCCCTCACTATTGCAGCAACCCCCACATCTGTAGACGGACACACATGGAGGTTTAAAGAAGGTGTTTGTCGCGACTCCAAACTCCTTCCCCACATCTATACACACCTCCCGTGGCATGCATTGAGTCTTTCTCCACTCATTATCAATACCTGTCAAGTCATAGGGAAATCAGTAAGTTTTACGGAAAC chr4 + 94230402 45922231 45922230 45922480 45922231 45922230 45922480 250 TAGTAAGAGTGAGAA---CTTACTGTCTTGCTGATGTAATTTGTGCTGATATTCATACACTGGAGTCCTTCACTATTGCAGCAACCTCCACATCTGTAGATGGATACACACGGGGGTTTAAAGAAGGTGTTTGTAGTTGCTCCAAACTCTTTCCCCACATCCACACACACTTCACGTGGCATGCACTGAGTTTTTCTCCATTCAGTATCAATACCTGCCAAGTTACAGGGAATTTTTGATGTTATAAGGCAGC ...:.:..:..:.x.---.::..:..........x...::.:......:.:.....:.....x..:..:.................:.............:...:.....:..:....................x.:x:..........:...........:.:......:..x...........:.....:........:...x............:.....:.:......x.:xxx.x...x..x..x.:. 15M3D235M 201/250 80.4% 250/94230402 0.0% 3/250 1.2% 130805524 59409031 +18358 chr4 + 190214555 176729504 176729503 176729777 274 TTACTATACATTTTATTTCCCATACTTACTTTTCAAGATCTCTGTATTATAATGTGCTGCAGCAAATTTTATAGTCTCTTCTGTCCTTGAGTTGAGGTTGGCCTGTTCTCTGTTATGTTGCCAGCCTCCTTTCCTTAGCTGACACTTGTACATTTTCCAATATTCTGGGTAGAGTACAGTCATGAGTTCATCTACACTGGACACAGACCGTAACTGCTCCTCCAGATCTTTGCTTGCATAAGCCTGTCAAAGAAAAATGCAAGATCAATGACTT chr4 + 94230402 45923492 45923491 45923765 45923492 45923491 45923765 274 TTACAACCTATTTTATATCTTGCACTTACTTTTCAGGATCTCTGCATTATAATGTGCTGCAGCAAATTTCAATGAATCATCTGATCTTGTGTCAGAGCTGGAGTGTTCCCTGTTGTGTTGCCAATCTCCTTTCCTCAACTGACATTTGAACATTTTCCAGTATTCTGGGTAAAGTACTGTCATGAGTTCATCCACACTGGACACAGATCGCAACTGCTCTTCCAGGTCTTTGCTTGCATGAGCCTGTCAAAGTAACATGCAAGATTAATTACTT ....x.:x:.......x..::::............:........:........................:.xx.xx..x....x:....x..::::.:...xx.....:.....:........::..........:.:......:...x..........:...........:.....x..............:..............:..:........:.....:.............:............x..x.........:...x.... 274M 226/274 82.5% 274/94230402 0.0% 0/274 0.0% 130806012 59408543 +3972 chr4 + 190214555 176787320 176787319 176787417 98 AGTGGCACATGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAACCCACGAGGCAGAGGTTGCAGTGAGCCAACATCATGCCA chr4 + 94230402 76033200 76033199 76033289 76033200 76033199 76033289 90 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .....::..:.--....:.............::........x.x:.x...x.:..........x:..x:xx:..:..:..------.....x...... 11M2D67M6D12M 68/90 75.6% 90/94230402 0.0% 8/90 8.9% 100754120 89460435 +10833 chr4 + 190214555 176792141 176792140 176793017 877 CCGCAAACCCTAACGCAGACCTACCGTGGCCTCGCCCGCGTCGGGCTCCGCGTCCGAGAGGTCGAGTCCGGACTCGAAGGCGGCGGCGGCGGCGGGCGCCTCGCGAGGACCCGGGAGCAGCGCAGCGGCGAGCAGAGAACACGCCACAGAGAAGAAGCCCAGCAAGTGCATGGTGGAAGGACCGGGGGTGGGGGACCGGTCCGCTGGCGGGGGCAGGGGTGGGGGCGCGGGCGCCCCTGCGAGGCCGCGGGCCCCTCCTGGTCCCTCTCCCCCGGGCTCCT------------------CCCGGCGACCCCCCCTGG-----------------------GCGAGCCGGA--------GGCGGCGGGAGCGGGTCCGGGGCTCC--------GCGTTCCCAACTTTGCAGGGCGCCCTCCCAGCCAGTGCCGGGGAAAGGCGGCGGGTGTCAGGTAAAAGCCTCA-CAGGAAACCGGACATCCGA-GCTCCCCGCATTCGGAGCCCGCGAGGTGAAGCG-AGGGCGAGGGAGGACGCCGCCGCGGTCCGCGTCGGTGTAGCTTTTTGGAGAGGCGGGGCGGGGGACACCAGAACACCCCGCGATGTTCAGCCCCTCCAAACCCGCCAGAGCCCTCGTCCCCCTCCTCCCTCCCCTTCCCCGAAGTGAGAGGAGCCGGGCCGCGGGCGCTGCGGCGGGGGCGCTGGCGGCGGTGCCGGGGGCGGGAGGAGGGCGGCGGGGCGGCTGGCGGCGGCGGGGCCCGGGAGCGCCGCGGCGCAGGATCCTCCAGAGCGCGCCGGGCTGAGCGGCGGCGGCGGCGGCGGCGGGCGCAGGGGCAGGGCATGACTGACGCGCCCTCTGCCTGCGCTTATGTGAGAGAAAGCGGCCGAGGGAGGGAGCGTGCCGAGCCCGGGCTGCCCTCCCCTCTCACTCTCCCTC chr4 + 94230402 45973960 45973959 45974697 45973960 45973959 45974697 738 CCGCGCGCCCGGA-GCAG-CCTACCTTGGGCTCCCCGGCACCGGGCTCCTCCTCGTAGTAGCCGTGCCCGGACTCGTA---GGCGGCGGCGACGGGCGGCTGCCGGGGTCCCAGAAGCACGGCGCCAGCAGCGAGGCAGCAGCCCAGGGAGAGCATCTCCAGCAAGTGCATTGTGCAGAGA-TGGCAGGGCGGAGCGGGGCCGC-----GGGGCAGCCGCAGGAATGCGGGCACAATTCCGAGGCT-ccttcttttccttttctctccccccccacccccctttctttcgctgtcctcacccccctccctcccctcGCAATATCCAAGGCAGTAAAATCCTCGGGATGGAGAAGATGCGACGGCAGCGGCGGCTCCCAGACGCCTTGCAGGAGAGCTCCCAGCTTTCCCAGCCTCTTTGCAAATTCTCACCGAAGTTATCCGGACTTTGCCAGGTAAAAAACCCACCAGGAAACCGGACATCCGAGGCTGCGCTCGCTCGGGA---GCGGTGGAAAGCGCAGAGAGGAGGAGGA-------------------------------GGGAGAGGAAG---GAGGGAAACGGG---ACCCAGCG-------GCCGCTCGCAGCCGG--------------------CGCCCTCCC--------------gcggggcccagcc----------cggcggctgcgc-ggc---------------------------gcggagcgctcgg------------ccgggggctgcgcggcgcctg-----------------gggctgc------------gcggcggcgggcgcggGGGCCGCGCATGGCGAAAGCGCCCTCTGCCTGCGGCTCCG--------AGCGGC---GGGAG----------------GGGCCGCCCTTCCTCCTCCTCCTCCCTC ....:x:...x:.-....-......x...x...x..x..::........x.x..xx..x:.:..x.:.........x.---..........:......x..xx..:..x...:.:....xx..:x.:..::xx..:x.:..xx...x:....:x.xx:.............x...x.::..-:..x:.x.x..::.x..x....-----.......xx.::..:::......:.xx:.x......:-.xxx.:::....xx..:...:.....x:x.:..:------------------...xx.xx..:.....x.-----------------------x..:.x:...--------.:....:.x:....x...x:.:.x..--------.x.:.....:....x.x:.x.x.::.x.x.:::xx::...::.xx.xx...xxxx..:.........:x.:..-...................-...x.x.x.::....::---...:x.x:.....-..:.x.::......-------------------------------x.......x:.---.:....x..x:.---....x...-------...x...xx.:..x.--------------------.x.......--------------.x..:...x:...----------......xx....-...---------------------------....:...x::..------------.....:..xx........xx.-----------------......x------------..............:.....x.x.....:.x:.x................x:.x:.--------......---.....----------------....:.....:..::...x::....... 13M1D4M1D59M3D100M1D22M5D37M1D34M18I18M23I10M8I26M8I73M1I19M1I17M3D13M1I14M31D11M3D12M3D8M7D15M20D9M14D13M10D12M1D3M27D13M12D21M17D7M12D56M8D6M3D5M16D28M 472/678 69.6% 738/94230402 0.0% 259/678 38.2% 130818181 59396374 +3128 chr4 + 190214555 176800227 176800226 176800277 51 CTGCATTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTT chr4 + 94230402 56907973 56907972 56908023 56907973 56907972 56908023 51 CTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGGGCTTTT ..x...:....:...:................:......:x.x..:x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 119892254 70322301 +3247 chr4 + 190214555 176800801 176800800 176800857 57 TCAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAGATATGCAGACTTACAAAAGACTT chr4 + 94230402 92934447 92934446 92934503 92934447 92934446 92934503 57 TCAAAAGAAAAAACAGAGAGCAAGAAAAGAAAAAACATGCAGTGCTACAGCAGACTT ......:......x.:...:x.......:....:.:......xx:....:x...... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 83866354 NA +9861 chr4 + 190214555 176821472 176821471 176821773 302 GAGACAAGGAAAGA--AGAAATCTCTGTTGCCTTTGCTCCTTGAGTTAGTAAAGGCAAAGAAAAAGTGAAATTCTTGATAGCTGTCTGCACTGAAACATTTCAGCTCAATTCTCTTTC-CCAAAGATCAAGTAAAGAAGGCTAATCTTGTTTTCTAGACACTTAA--CTCTTTTTCTTAGGCATCTTTAGTCCTTATTTTGCCTGAGAGCCTCTTAAAGGGAATATTGTATTTTAAAGTGACTCTTTAG--------------------------------------------------TAATACAA---ACACAATAGTCCCGAATACATCAGTGTCACAGTAATCGTGTTCAGAAGTT chr4 + 94230402 45983401 45983400 45983758 45983401 45983400 45983758 358 GAGACAATAAAAGGGCAGCAGGGCCTGTGGCCTCTGCTCTCCAATTCAGTAAAG-TGAAGAAAAAGTGATTTCACCAGGAGCTGTCAACTCTGAAACATCTCAGTTCAATGTGATTTCACTAAAGATCAAATGGAAAAGGCTAATCTCGTTTTCTAGACATTTAAATCTCATTTTCCCAGGCAGATTTA-CCCCTGGCTTGTCCAAATACATCTTAAACAGAATATCTTATTCTAAAGTGTTTTCTGGGTTTTGTTTTTTTGTTTTTTATTTTTTTTTCCAGGGATTTTATTTTGGTTTTAATACAAGAGGCACAATAGCAGTGAGTACGCCAGAGTCCCAGTTATGGTTTTCAAACATT .......x:....:--..x.:xx:....x....:.....::::.x.:.......-::............xx.:x::::x.......x:.x.........:....:.....x:xx....-.:.........:.::.:...........:............:....--...x.....::.....xx....-:..:.:x:...:.::.:x:.x.......x:......:x....:.......x:.::.x:.--------------------------------------------------........---:........:xx:..:...::...x...x....x..x..x....:.x:.. 14M2I38M1D63M1I46M2I22M1D59M50I8M3I50M 213/300 71.0% 358/94230402 0.0% 60/300 20.0% 130838071 59376484 +3012 chr4 + 190214555 176822223 176822222 176822286 64 CAAAAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATGGAAAACATAGCCTTTTCTTAA chr4 + 94230402 40623653 40623652 40623716 40623653 40623652 40623716 64 CAAAGAAAGCCTAGTTAAAGAAATAAAAAAATAGAAGGAAATGGAAAATAAATCTTTTCCTAAA ....:....:xx.:xx...:...x.......x.:..............:.x.x.:...:..x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 136198570 54015985 +3018 chr4 + 190214555 176822225 176822224 176822293 69 AAAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATGGAAAACATAGCCTTTTCTTAACATTTAT chr4 + 94230402 23912254 23912253 23912322 23912254 23912253 23912322 69 AGGAAAGGAATAAACATCAAAAAAAAAAAAAAAAAGAAATGGAAAATGTGTTCATGTTGTAATACATAT .::....x..x...x.xx................:...........::.:x:.x.x.:x...:.:x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 152909971 37304584 +3269 chr4 + 190214555 176830141 176830140 176830213 73 TCAAAAAAAAAAAAAAAAAAGTGTGGTGTGTGTGTGTATATATATATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548418 85548417 85548490 85548418 85548417 85548490 73 TCAAAAAAAAAAAAAGAGTTATATG-TATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ...............:.:xx:.:..-.:........:...:..........x.....-.x.:..:x....x:.. 25M1D31M1I16M 56/72 77.8% 73/94230402 0.0% 2/72 2.8% 91281723 NA +3434 chr4 + 190214555 176830146 176830145 176830215 70 AAAAAAAAAAAAAAAGTGTGGTGTGTGTGTGTATATATATATATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548420 85548419 85548490 85548420 85548419 85548490 71 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT .............:...xxx:...:.......::...:..........x.....-.x.:..:x....x:.. 54M1I16M 54/70 77.1% 71/94230402 0.0% 1/70 1.4% 91281726 NA +3517 chr4 + 190214555 176830148 176830147 176830217 70 AAAAAAAAAAAAAGTGTGGTGTGTGTGTGTATATATATATATATATATATATAT-ATATATATATATATAT chr4 + 94230402 85548420 85548419 85548490 85548420 85548419 85548490 71 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGATATCCAT ..............x..x:.:...:.....:.::...:..........x.....-.x.:..:x....x:.. 54M1I16M 54/70 77.1% 71/94230402 0.0% 1/70 1.4% 91281728 NA +8789 chr4 + 190214555 176844076 176844075 176844380 305 TTAAAATTCATTGAAGAGGTCACATTTCTATATCCTACAATAAGAT--AACATTTCTTTTTTCTGGGTTAAGTACCATCAAGGCCTTTGACCTTAAGGCAA-------CTTCCTGAGGCAA----CTTACAATG-GAGACTCCACAATCAACAGAAGCTTTGAGGGTCCCACCAGGCA-CACAAGTGGAGTGGAGTGACATG-GCTGTGGGTTTGATCTGAATGGGAATGAGTTTCTTAGGAAAGCCTAATTCACCAGTTCCAATAATGCTTGAGCAGTAATCTTATAGCTTATGTGCTTTGTAAGAGAAGTCTTTAATGC chr4 + 94230402 45995526 45995525 45995841 45995526 45995525 45995841 316 TCAAAAGGTTTTAAAGTGGCCA-AGCTATATGTAC-ACAAAAAGGCTAAACATTGCTTGTCTCTGGGTCACAGACTATCAAGACCTTTGACCTTCGAGCTATAGATCTCTTACGCAGGCAAATTACTTACACTGCAATACTTCATAAACAACAGAAGCCCCAAGTGTCCCACCAGGCAGTACAAATAGAGTGGGGTTACATTTGCGATAGATTTGATTTGGATGGAAATGAGCCTCCCCAGGAAGTCTACTTAAGCCTTTTAAATAAAGTCTAAGCAATGTCATCATGATTTA---GTTTTAGAATTGTAGACGGTGATGC .:....xx:x..:...x..:..-.x:.x...:.x.-....x...::--......x...x.:.......:.x:x..:......:...........x::..x.-------...x.xx......----......x..-:.x...:..:..x..........::::..x.............-:....:.:......:..x....x-..x:.:.:......:..:....:......::..::x:.:...:...x..x.x.xx..:x.....x.::.:....:.:x:x.:..:::...---.:...:x..xx.x..x.xx.:.... 22M1D12M1D10M2I53M7I13M4I9M1I43M1I23M1I90M3D25M 206/300 68.7% 316/94230402 0.0% 21/300 7.0% 130848550 59366005 +3420 chr4 + 190214555 176851050 176851049 176851143 94 AACATGCTATTTACAGTACTGGA---------CATCAGAGAAAGAACACTGATCTCTGAGAGG---CAAAAAAACAAAAAACAAACAAACAAAAAAAACAAACAAA chr4 + 94230402 33047885 33047884 33047988 33047885 33047884 33047988 104 AAAAGGCTAATTAGAGTTCAGGAATTATTCTTTATCAAAGAAGGGTGA--AATCATGGAGAGGGTGTAAAAAAACAAAAAACAAACAAACAAAAAAAACCATCAGA ..x.x....x...x...x.x...---------:....:....:.:xx.--:...x:x......---:................................x.x..:. 23M9I16M2D13M3I40M 72/92 78.3% 104/94230402 0.0% 14/92 15.2% 143803165 46411390 +3429 chr4 + 190214555 176852080 176852079 176852179 100 GTGGTGGCACGTGCCTGTAATCCCAGCCACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATGGCGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......-......----..:.:.....:.....::........x:xx.x...x...........:.:..x.xx:..:..:..------..x...::.... 6M1D6M4D65M6D12M 67/89 75.3% 89/94230402 0.0% 11/89 12.4% 100818879 89395676 +3056 chr4 + 190214555 176852529 176852528 176852595 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 100819318 89395237 +3146 chr4 + 190214555 176859236 176859235 176859314 79 TTCCCAACATCCTCTCTTCCTAAGCTAAAAATAAAAATGAAATACAAGAGATAAATAACGAATCTTACTGATATATAGA chr4 + 94230402 11999721 11999720 11999799 11999721 11999720 11999799 79 TTACAGAAATGTTCATTGCCTAATACAAACAGAAAAATGAAATACCATAGATAAATACCATATATTACAGAAATATAGA ..x.x:.x..x:..x:.x.....xx:...x.x.............x.x.........x.:x..x....x..x....... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% 164859515 25355040 +4068 chr4 + 190214555 176873070 176873069 176873214 145 TCTTTTCCCTGCCTTCCCCGCCTTCTCTGCCTTCCCTGCCTTCCCTTTCTTCCTTTTCTTTCTTTCCTTCT---------TTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 + 94230402 28328430 28328429 28328579 28328430 28328429 28328579 150 TTTTCTCCCTGTCTATTG----TTCTCTGCTTCCAATGTTTTTCCATTTTATATTGTCTGTTTCTCCTTTTATGTTTTGATTTTCATTTATTCTACTTTTTCTCTCCACTTTAATTTTTTTCTTCCTTACATTTCCTACTCACTTATTTCCTTC .:..:......:..x::x----........:.:.xx..::..:..x..:.x:x..x...x.:.:.....:.---------.....x...x..:.x....:.:...::x::..xx...:.:...:..:.x.x..:.:.x..:x...x:....... 18M4D49M9I74M 91/141 64.5% 150/94230402 0.0% 13/141 9.2% 148544640 41669915 +3037 chr4 + 190214555 176873106 176873105 176873183 78 TGCCTTCCCTTTCTTCCTTTTCTTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCT chr4 + 94230402 14667813 14667812 14667890 14667813 14667812 14667890 78 TGCTTCTACCTCTTCACCTTTCTTTCTTTCATTTTTTTTGTTTTCTTTTCCTGTATATGTTGTTCTGTAATACCCTCT ...:.::x.:.::.:x.:............x..:.....x.........:..x.x.x.x..x:...x.xx.x.:.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 162205293 28009262 +3322 chr4 + 190214555 176873109 176873108 176873176 68 CTTCCCTTTCTTCCTTTTCTTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTT chr4 + 94230402 26415985 26415984 26416052 26415985 26415984 26416052 68 CTTTTTTTTCTTCCTCCACTTACTTGCCTGACTTTTGTTTTCTTTTTCTACCTTTCTTTGGCCTCCTT ...:::.........::x...x...x...xx:....x............x:........xx.:.:... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 150457124 39757431 +3162 chr4 + 190214555 176873128 176873127 176873195 68 TTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCC chr4 + 94230402 22331050 22331049 22331117 22331050 22331049 22331117 68 TTTTTTTCCCTCTTTTTCTATTTTCTTTCTTTTTCATCTCCTCGCCATCTCTCCCTCCATGTCCTACC ...:.....:.........x..:.:.......:.:x::.:...x::x.:....:....x:x....x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 154542078 35672477 +3184 chr4 + 190214555 176873158 176873157 176873211 54 TTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 + 94230402 38772185 38772184 38772238 38772185 38772184 38772238 54 TTCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCCC ......:.......x.....:.:.:......:.::.::.:..x....:...:.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 138100973 52113582 +3257 chr4 + 190214555 176873176 176873175 176873305 130 TTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTCCTTCCTTCCTTCTCTTTCTTTCTTTTTCTTTCTTTCAACTGGGTCTCTTTC chr4 + 94230402 48874866 48874865 48874988 48874866 48874865 48874988 123 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATC------TCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATC-TTCTAATATTTATATCTCTTTC ........:.:::x.x.x:..:::..:x.xxx.:::.x::......::x..------....x.:.x.........x.::x..x............x:.......x..-....xx:.x:.:x:........ 51M6D50M1D22M 79/123 64.2% 123/94230402 0.0% 7/123 5.7% 127998310 62216245 +3485 chr4 + 190214555 176887077 176887076 176887164 88 TTTTCTTTCTTTTTCTCTTTCTTCCTTCCTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCCTTTCTTTCTCTCTCTCTTTCTGCATTT chr4 + 94230402 49829840 49829839 49829927 49829840 49829839 49829927 88 TTTTCTGTGGCTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTT ......x.xx:..x:.:..x.::x:...:......:............:..:.....:...::..::..x.x.x.x.x:.:..:x... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 127057237 63157318 +3311 chr4 + 190214555 176887232 176887231 176887283 52 TTCTTTCTTTCTTCTTTCTTTTCCTTTCCTTTCCCTTTCTTTCTTCCTTTCC chr4 + 94230402 74430684 74430683 74430735 74430684 74430683 74430735 52 TTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ..:...:....:.:......::...::..:......x...:.:......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 102456548 87758007 +3952 chr4 + 190214555 176887236 176887235 176887381 146 TTCTTTCTTCTTTCT----TTTCCTTTCCTTTCCCTTTCTTTCTTCCTT-----TCCTCTTTCTTTCCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCTTTCTTTCTGTCT---------TTCTCTCTCTCTCTCTTTC chr4 + 94230402 3415293 3415292 3415456 3415293 3415292 3415456 164 TTACTACTTCTTTCTGGAGCTGTCTTTCCTTTCCTATTCTTTTTTCATTCCTAGTCCTATTCCTTTCACATTCCTATTCAATTCCTATTCCTTCTTAAAAAGTTCCTCTTTCTTTGTCTCTCTTTTGTCTCTCTCCCATAACCCGTCCCACCTCTCTCTCTCTC ..x:.x.........----:.x:...........:x......:...x..-----....x..:.....x.x.....x:::xx:....x.:.:.:...xxxxxx.:::.......::x..::..:...x.:...x..:---------.:.:x:..........:.. 15M4I30M5I82M9I19M 97/146 66.4% 164/94230402 0.0% 18/146 12.3% 173471943 16742612 +3347 chr4 + 190214555 176887251 176887250 176887311 61 TTTCCTTTCCTTTCCCTTTCTTTCTTCCTTTCCTCTTTCTTTCCCCTTCCTCCCTCCCTCC chr4 + 94230402 50936071 50936070 50936128 50936071 50936070 50936128 58 TTTTATTTCCCCCCCTTTTTTTTTTTTCTTTCCTCTTTCT---CCCTTCCCCCCACCCCCC ...:x.....:::..:...:...:..:.............---.......:...x...:.. 40M3D18M 46/58 79.3% 58/94230402 0.0% 3/58 5.2% 125951180 64263375 +3265 chr4 + 190214555 176887302 176887301 176887402 101 CCCTCCCTCCTTTCCTTCCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCTTTCTTTCTGTCTT---TCTCTCTCTCTCTCTTTCTTTCTTTTCTTTCTTCTTTCT chr4 + 94230402 83326928 83326927 83327028 83326928 83326927 83327028 101 CCCACATTCCTTTATTCACCATCTTTATCTTTCTAGCCCC---CTTTCTTTCTCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...x.x:......x:.:x.:x.....x.......xx.:..---...:......:.:.xx:.:---...x.:::.x:x.:.....x............:...... 40M3D19M3I39M 68/98 69.4% 101/94230402 0.0% 6/98 6.1% 93560374 NA +14645 chr4 + 190214555 176894536 176894535 176895508 973 TTACATCTTTTATTAAGATAACCCTACCATTGCT--TACTGAGTTGCTTGATACTTTTAAAAGAAATGCTAGACAAAATACATTCTCTCCAGGAAATTCCTAAACTCTAACCTTTCAGGGTCATAGAGAGCAGCAG----TTTGTTGGTTTGGAAAGTGACCTGAGTTCAGCTCTTCTCCAAACAAACCTTCAGATGTTATCTGTGTGTTGGCTCAGAAGACTGCACTGCTAACCCATAGAGATCAACAGTAGCATGTTTT--ATCACTTT-TTAGCTTTCCGTGAATGACATTCATAGGGAAGGAA--------------------ATATATGCATCGTA------------CGGAAAAT-----------------GTTCAAAGATTCTTGAAGACTTTT-------TAAAAATT--CCACATTT---------------------------AGCAAAAGAAATC----TATTTAA------------------AAA----------------ACCAAAAATATCAAACAGAAGTTTATAAGGCTAAAGTG---TTAAAGT------CCTAATTAAATCTATACACTTCTTATATTGAAATTCAATGAT------------CAATATAT---TCTTTAGATAG------CTATTCCAGAA----------AAACAAAAGTTG---------TGGAACAATCAGTGTTTTCA----GTTGAGAAGATGTATTAATATGGCTA---------TCTTAAAATTGCAAACAATTCA--------------------------------CTGTCATTGAAC---------------------ATTTTTATAATGATAATTC----ATTTTAGAAGACAACTTGCAAAGCAAATTTTAAAAA---------ATTCACGGGG-----------CATGAGGT----AGGTAATCTGAGAAGTTT-----------TATT---TCCTCCTTGTGAAGTT------TAGAGAT------------------TTAATCACTCATAAAATGAACAACGTT-TACTGGAGTGAAGGGAAAGCTACAGTGAATTCTAGAAGCGTTTTAAGAAAACA-ACATTTTAACTTCTG-----TCTGTGCCGCAA-AGCAGCTTCACAAAGGTGCTTGCTGTTTTATGTATTGTTTTTCTCCCGAAGGTTCAAACTTAAAGATCCCAACATGGCCCCAGCTGTAAAAGCACATCTTCCAGTTTAAATTAGATTGACAACTTCCTATAGTCAGGGAGC--------------AAGTTTCAAGCTTTA chr4 + 94230402 46013123 46013122 46014411 46013123 46013122 46014411 1289 TTACAACTCTGGGGAAAATAACCTTACTATTGCTCTTAACTATCCCCTTGATACTTTCATAA-AAATGTTAGACCAAACAGAATCTCTCCAGGAAATTCCTAAATTCTAACCTTTCAGGGTCACAGAATGCAGCAGACAGTTTGTTGTCTTGAACAGTGACCTCAGTGCAGTCCTATTCCAAACAAACTTTTAGATGCTATCTGTGTATTATCTCAGGGGAATTCAGTGCTAGCCCTTACAGATCAACAGTAGCACTTTTTGCACCACTTTCTTCTCCTTCTACAAAGAATG-----AGGAAATGAATCTCAAATCCAGTGTTTTATATATATGTATTGTAATTATTGATTCTCTTAGAATTACCATAATTATACAGAATTTCAGTATTGTTAAGGATTTCTTCGAAGATAAAAATCTGCAACACTTCAGTCTTTGTGATGTGAATGATTCTGAAGCCAGAGCAGTTATTGTACTTAATTAGGATATTATAGTGCTAAAAGGGGTTTCCTGGGTTACCAAGAGCATTATACA-----TTGTAATACAGAAGAGGGTGCACAGTTTCTTCCATACACAAATCAAATTGCTTCTTAAAAGTGGATTAAAAAATTTCCACATCTGACAATATGTAAGCCATTATGTAGTAGAATTTACCTCAGCATTATTAGATGAAATGCAAATTAGGAAGGCATTGCAGAAATCACTAGTTTTATTCTTTTATGGAAATAGACTTCTATGGAAAAATACCTGGTCTGACAATTTTGGACAGTTCAAATTCCATCCCTTATATTCCATCCCATATTGCTTATTACAGAAAATTACATAAATGAAAGTTTTGATTTCTATATTAATTATTCTATAAGCAAAAAAAAAAAATTGAAAAAGGCTGTCTAGAAAAAGGAAATTATTCAGTGGGTTTGTCTAACACACTAGGTGTCAAAATACTAGCAAATGTTTGGATAAAACTGTATTTGATAATCTTCATAAAGTTCTGCAATAGAAATGTGTCCTCTTTGGTATAATTGAGTATTCAGCCAATAAATAGGGTCATTTTGGAGAGAA--------TCCTGTGAATTTCTGGGGCTTCTCAGGGCAGGACACATTCCAAGCTTTGATCAATCTCTTCTGGAAGAGTTACTTAATGACATTTTTTGCTATTTTACCCACAAGTTTCTCCCAGAAGACAAAAACTTGAAGATCTCCTTACTGCCCCAGCTGTAAAAGCACATCTGTCAGTTTAAATTAGATCGACAGCTTCCTATAGTCAAGGGGCAGACTAACGTCATTAACCTTCAAGCTTTA .....x..:.x:xx..:......:...:......--..x:x.x::x...........:.x..-.....:.....x...:.x.x.....................:..................:...:x.......----.......x:...:.x........x...x...::..x:...........:..:.....:.........:..:x.....::..x.x..x.....:...x..x...............:x....--.:......-..xx.:...::::..x:.::-----...:..x...--------------------.......:..:...------------.xx.:...-----------------:..:x.:x...x..:.:..:..:.-------.......:--.x...:..---------------------------...x.:..x.:.:----..:....------------------...----------------.....:.::..:.x...-----..:...x:.x:...x.---x:.x...------.x..xx:.....x.xx::.......x.xxx::...x..x:..------------......:.---:.x...x:...------:..:::...x.----------...::x..:..:---------..x.:x.....x.:x...:.----x..:x.:.:..:x.:.xx.....xx.---------...x.x....x:::...:....--------------------------------:.:.:.:x...x---------------------....:....x.:..x....----.x:xx.:..:.x..x...x...:x:xxx.:..:...---------.....xx...-----------..:x....----.::..x.xxx.:.x....-----------....---.xx..:.::.:.....------....:..------------------..:.x:.:...xxx...:..:.:x..:-.x:.....x...--------.x.x.......::x.::..x.:.:.:.:x.:x.-.....::..x:.:..-----...x.x.:.x..-..:x:...x.::.x:x.x:.....:.....:x:.:x:x...:::..x....::xx......:......:.xx:.:x.......................x:...............:....:.............:..:..--------------..x:........... 34M2I26M1D73M4I121M2I8M1I20M5D10M20I14M12I8M17I24M7I8M2I8M27I13M4I7M18I3M16I17M5D16M3I7M6I42M12I8M3I11M6I11M10I12M9I20M4I26M9I22M32I12M21I19M4I36M9I10M11I8M4I18M11I4M3I16M6I7M18I27M1I12M8D33M1I15M5I12M1I141M14I15M 663/954 69.5% 1289/94230402 0.0% 354/954 37.1% 130881413 59333142 +3167 chr4 + 190214555 176900973 176900972 176901051 79 GCTTGGAGGTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGTGTATGTATTTTGGGAGAGGCA chr4 + 94230402 13734902 13734901 13734979 13734902 13734901 13734979 78 GCTTGG-GGTGGGCGTGTGTGTCTGTACTGCTGGGTGTGTGTGCATATCTGTTTGTGTATATATGGTGAGAGAAAGACA ......-....:::........x...::xxx..x.........::.:.x.....:...:...:.:x.xx.:..:..:.. 6M1D72M 54/78 69.2% 78/94230402 0.0% 1/78 1.3% 163166071 27048484 +3409 chr4 + 190214555 176901887 176901886 176901962 76 TACACATCTCTCTCTCTCTCTCTCTCTATATATATATATATCTATATAGAAAAAAATATAGAGAGGCTTGCTACCT chr4 + 94230402 26955842 26955841 26955911 26955842 26955841 26955911 70 TACACATTTCTCTCTCTCTCCTTCTCTCTATATATACATATTTAAGTGACAAAATGCTTAG------CTGCTGCCT .......:............::.....x........:....:..x:.::x....x::x...------:....:... 61M6D9M 53/70 75.7% 70/94230402 0.0% 6/70 8.6% 149946045 40268510 +3059 chr4 + 190214555 176917511 176917510 176917610 100 ACTGCTAGATTCATGCTTTCTATTTCTTCTTGATTCATATGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATAA chr4 + 94230402 65285531 65285530 65285630 65285531 65285530 65285630 100 ACTGCTACTTTCATGCTTCAGTTTTATAATTAGGTGAAATATGTCAATGTTGAATTATTTACATATATACATATCTATATATATTTGTGTGTCTATAAAA .......xx.........:xxx...x.xx..::x.x.x..:::.xx..:.xx.xx...x..:.......:....x.........x.:.:.:.x....x.. 100M 66/100 66.0% 100/94230402 0.0% 0/100 0.0% 111631980 78582575 +3174 chr4 + 190214555 176917810 176917809 176917887 78 AGTCGTGCTCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGAGAGGATCACTTGAATCTGGGATGTCAAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....x.x......:.........::::.......:x:xx.x.:.x........:.::.:.xx.:x:.....:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 100884610 89329945 +3379 chr4 + 190214555 176934968 176934967 176935076 109 GGGTTTTTTTGTTTGTTTGTTTGTTTTATTTATTTATTTATTTTTTAATTTTTTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCGCAATGTGCAGGTTAGT chr4 + 94230402 17419983 17419982 17420082 17419983 17419982 17420082 100 GGGTTGTTTTCTGTGTTGGTTTGTTTTGTTCATTTGTTTTTGTTTTTCCCTTTCTCATCCTTATTCAGTCTTAA---------TACTTCTGCTCTACGTTTGGGTCAGT .....x....x.x....x.........:..:....:...x.x....xx::...:.:..:x.....xx:::....---------...x.x...x.x.:..x::...:... 74M9D26M 69/100 69.0% 100/94230402 0.0% 9/100 9.0% 159514985 30699570 +3002 chr4 + 190214555 176942001 176942000 176942064 64 CAGGCAGAACTTTAGTGTTTTTTGGTTTGTTTGTTTGCTTTTGTTTTTATTTTTTGTCTTTTTT chr4 + 94230402 42184849 42184848 42184912 42184849 42184848 42184912 64 CAGCCTGGACTTCTGTGTTTTTTTTTTTGTTTGTTTGTTTTTAATTTTAAAGGTTGTATCTTTT ...x.x.:....:x.........xx............:....:x.....xxxx....x.:.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 134757152 55457403 +3781 chr4 + 190214555 176942545 176942544 176942620 76 CTCACTATATAAATCAATCCCTCCAGACTCTTAATTGTATTTGCTGTTCTTTTTTGAACTCCTTCCAGTTCCTCAG chr4 + 94230402 847209 847208 847284 847209 847208 847284 76 CTTGCCATATAAATCATGCCCTCCAGCTCCTTGATTACATTCCCGGCTCTCCTCTGAACTCTCTCCAATCCATCAG ..::.:..........xx........x::...:...::...:x.x.:...::.:.......::....:.:.x.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 176095336 14119219 +3251 chr4 + 190214555 176947181 176947180 176947258 78 TCTCATTCTTTTCTCTTCTCTTTCTTTCTCTCTTTCCTTCCTTTCTTTTCTGTTCTTTTCCTTTCTTTTCTTTTCTTT chr4 + 94230402 88113302 88113301 88113379 88113302 88113301 88113379 78 TCTTGTTGTTTGTTATCACCTCTTTGTCTCTCTTTCCTTGATTGCTTTTCTGTTTTTTCCTTTCCACTGCTATTATTT ...::..x...x:.x.:x:..:.:.x.............xx..x..........:...:.:..:.x:.x..x..x... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 88833879 NA +3096 chr4 + 190214555 176948321 176948320 176948390 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 100915124 89299431 +3434 chr4 + 190214555 176964599 176964598 176964698 100 AGCTCCCCCATCTTT--TTTCTTTTCTTTTCTTTTCTTTTCTTT--TCTTTTCTTTTCTTTT---CTTTTCTTTTCTTTTCTTTCCTTCCCTTTCCTTCCTTCCTTC chr4 + 94230402 89201212 89201211 89201318 89201212 89201211 89201318 107 AGCTCTCATGCTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCC .....:.x::::...--:.x:..........:...:...:....--x..x.x........x.---.:.:...::::....:...:.x.x..:.........x:..:. 15M2I27M2I16M3I42M 70/100 70.0% 107/94230402 0.0% 7/100 7.0% 87763387 NA +3502 chr4 + 190214555 176964600 176964599 176964723 124 GCTCCCCCATCTTTTTTCTTTTCTTTTCTTTT--CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCCTT---------CCCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176280 50176279 50176414 50176280 50176279 50176414 135 GCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ....:..:x....::..:x.::x:::x.....--x..x.::.....x......x:x..:x....:x.:.::........:.:---------.:.:::x:..:...x::......:.........::.:.x..... 32M2I48M9I44M 78/124 62.9% 135/94230402 0.0% 11/124 8.9% 126788320 63426235 +3020 chr4 + 190214555 176964634 176964633 176964705 72 TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCCTTCCCTTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 69163347 69163346 69163418 69163347 69163346 69163418 72 TTTCTTTTCTTATCTTTTCTTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ...........x..........::....::::::.:.x..::.x:..:..x.:x..:....:x..:x..:.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 107801287 82413268 +3209 chr4 + 190214555 176964655 176964654 176964734 80 TTCTTTTCTTTTCTTTTCTTTCCTTCCCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCA chr4 + 94230402 53757784 53757783 53757863 53757784 53757783 53757863 80 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTTCCCCCA ....:...:x.::.....x:::...xxx.::..::..::..::...:.:...:....:....:..::...:....:::.. 80M 49/80 61.2% 80/94230402 0.0% 0/80 0.0% 123206871 67007684 +3291 chr4 + 190214555 176966894 176966893 176966966 73 TGCACCTGTGGTCCCAGCTACGTGGGAAGCTGAGGCAGGAGAATCATCTAGGCCGAGAAGTTTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x...:..:........x..::.:......x.xx.x...x..::.:::..x.....:..x:....::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 100933689 89280866 +3992 chr4 + 190214555 176994642 176994641 176994852 211 AATTCTGGAATTTCCACCTCTTTTCTTTTCTTTCGTTCTCCTCCCCTC-CCCTCCCCTCCCTCTTCCCCTTCCCCCTCCCCTCCCCTCACTCCCCACCTTTCTTTCTTTCTGTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTT------CTCTCTGTCCCTTCCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCT chr4 + 94230402 19215353 19215352 19215566 19215353 19215352 19215566 214 AATTATGAATATTCCAC---TTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAACCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTAT-TCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ....x..:.xx......---...:x.:..:.xx...x:..::..:xx.-...x.xx.:...:.:.....::....:.::::.::::.:.x.:.:x:.xx......x..::.x.x......xxx....x.x.-.:..:xx...:::...x........x.:x..:..------:.....xxx.:..::...x:...x:x..:..::x::....x..... 17M3D28M1I82M1D34M6I46M 124/207 59.9% 214/94230402 0.0% 11/207 5.3% 157779289 32435266 +3471 chr4 + 190214555 177001979 177001978 177002065 87 CAATTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTATGTGTTTGTCTCTTTGTCTCACTGC chr4 + 94230402 26578258 26578257 26578344 26578258 26578257 26578344 87 CAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTGCTTTTCTTGGTGC ....:.xx.:...................:.:.:.:.:.:x..:...:...x...::....:x:xx.::x...x:..x...::x... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 150423721 39790834 +3010 chr4 + 190214555 177001987 177001986 177002038 52 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26578268 26578267 26578319 26578268 26578267 26578319 52 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTG ...................:.:.:.:.:.:xx.:...:...x...::..... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 150423719 39790836 +3221 chr4 + 190214555 177001989 177001988 177002053 65 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTATGTGTTTGTCTCT chr4 + 94230402 26578266 26578265 26578330 26578266 26578265 26578330 65 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCT .:...................:.:.:.:.:.xx..:...:...x...::..:..x:x..x:.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 150423723 39790832 +3068 chr4 + 190214555 177001993 177001992 177002045 53 TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTATGTGT chr4 + 94230402 26578266 26578265 26578318 26578266 26578265 26578318 53 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGT .:...................:.:.:.x.x.xx..:...:...x....:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 150423727 39790828 +3237 chr4 + 190214555 177004478 177004477 177004547 70 CGTGGTGGTGGGCACCTGTAATTTCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x....:..:..........::........x.xx.x...x::........::.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 100971281 89243274 +3086 chr4 + 190214555 177023364 177023363 177023482 119 GAACTTAAAGCATAACAAAGAAAGAGAAAGAAAGAGAGAGAGAGAGAAAGGAAAGAA-AGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 76625740 76625739 76625858 76625740 76625739 76625858 119 GAAGTGAAAACAAAACAAAACAAAAAACAAATAG-GATAGAAGTGGAACAGAGAGAACAGAGTGGAAAACAAATACAGAAGGACTGTGGAAAAAATAAGAATAAAGATGCACAGAAGGAA ...x.x...:..x......:x..:.:.x.:.x..-..x...::x:...x:..:....-...:x.::.:.x...x.x....:..xx.x.:..:...x..::.x.....x:x.x....:... 34M1D22M1I62M 76/118 64.4% 119/94230402 0.0% 2/118 1.7% 100397624 89816931 +4007 chr4 + 190214555 177023390 177023389 177023605 216 AAAGAAAGAGAGAGAGAGAGAAAGG---AAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAA----GAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAAAGA chr4 + 94230402 61281963 61281962 61282185 61281963 61281962 61282185 223 AAAATAAAAGTGGGA-AGAGAAAGGGCAAAAGAACAGATGAAACCTGAAGGAAACAAAACACTGATAATGAAAATGAGAAAGTTACCAAGACAAGAATAGAAGGAACAAAAATCCCTTAAAGGAAATATGTGGAGGGAGAGAAATACTAGAAGCAAAGGAAAGACAGGGTAAGGAATAAATAAATGGAACGACAGAGAACAGAAATGGCAGAAGGAAATTAGGA ...:x..:..x.:..-.........---......x::.x..:.xxx:...:..:x..:.x.xx..x.:x:.:..x.......xx.xx....-.....x::...:..x...:.xx----:..:....x.x:x::.::..:.....x.xx.....x......::..x:.:.x..:...x:..x.:.x::.:x:.x.:....x:::..x.:x....:..:.xx.:.. 15M1D9M3I63M1I22M4I106M 130/215 60.5% 223/94230402 0.0% 9/215 4.2% 115741427 74473128 +3169 chr4 + 190214555 177023412 177023411 177023576 165 AGGAAAGAA------AGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAGAGAGAAAGAAAGAA chr4 + 94230402 56107291 56107290 56107461 56107291 56107290 56107461 171 AGGGAAGAATGTAGCGGAAAAAAGGAGCAGGAAAGAAAGCATATGGAAAACACAGCAGAAGAGTATGGAGGAGAACAGTGAGGAGAAAATGGGAATAGAGTAGGTTGATGAATTACGAGTGTAGAAGTAGAAAAAAAAGAAATAGGAAAGGAGAAAGTGATTGAGGAACAA ...:.....------:....:.::...x.:.........x.x:x.:..:.x.x.:x:::.:..x.x.:.:..:.:x.:x:.:..:.:..x.::.:x.:::x..:xx..x:..xx.x..:x.x.:.::x:....::.::..::x.......:..:...x..xx:..:..x.. 9M6I156M 91/165 55.2% 171/94230402 0.0% 6/165 3.6% 120916121 69298434 +3313 chr4 + 190214555 177023414 177023413 177023532 119 GAAAGAAAGAA--AGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----AAAGAAAGAAAGAAAAGA chr4 + 94230402 51148380 51148379 51148502 51148380 51148379 51148502 123 GAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAA--AAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA .......::.:--.x.......:...:.........x....:xxx....xx::..x.:..x.x:..::.x:...:.:...:..:...--..:..::..x..x.----:...x.x...:...::.. 11M2I74M2D14M4I18M 78/117 66.7% 123/94230402 0.0% 8/117 6.8% 125875034 64339521 +3030 chr4 + 190214555 177023420 177023419 177023498 79 AAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241511 75241510 75241586 75241511 75241510 75241586 76 AGGAAATAG---GAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA .:....x..---...xx.x...x.......:....:........:...:.x..:.xx.:......x..:.x.x..:.:. 9M3D67M 55/76 72.4% 76/94230402 0.0% 3/76 3.9% 101781909 88432646 +3888 chr4 + 190214555 177023425 177023424 177023559 135 AGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAA-----AAGAAGGAAAGGAGGGAGGGAGGAAAGAAGG chr4 + 94230402 51148379 51148378 51148516 51148379 51148378 51148516 138 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGA--AATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAGCGTGCCGGGGAGG ...:...::...xx.x.:...:.....:.........x....:xxx....xx:.--..x.:..x.x:..::.x:...:.:...:..:.....:..::..x..x.-----...x.x...:.:......x.x.xx::.:... 54M2D48M5I31M 87/133 65.4% 138/94230402 0.0% 7/133 5.3% 125875046 64339509 +3476 chr4 + 190214555 177023443 177023442 177023566 124 AGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGG-------GAGGAAAGAAGGAAGAGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAA------CAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG .......::...xx.x.:.....:...:.........------x....:xxx....xx:..:x:::.x.x::.::.x:...:.:....:.:.:..........x:-------..:.x.x........:... 37M6D62M7I19M 78/118 66.1% 125/94230402 0.0% 13/118 11.0% 125875064 64339491 +3094 chr4 + 190214555 177023456 177023455 177023536 81 AAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGG---AGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA .:.....:---......x..x...x...x....x.:..:..xx.x.:.x..........:..x.x...:.:x....:.... 8M3D70M 57/78 73.1% 78/94230402 0.0% 3/78 3.8% 135911278 54303277 +3053 chr4 + 190214555 177023469 177023468 177023524 56 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 + 94230402 83419839 83419838 83419894 83419839 83419838 83419894 56 AAAGAAAGCAAGGAGCAATAGAAGAGTGAAATAAACAAGGAAAGAAAAAGAAGGAA ........x...:.:x..x::....:x....x...x..:.............:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 93603630 NA +3349 chr4 + 190214555 177023487 177023486 177023571 85 AGAAAGAAAGAAAGAAAGAAAGA-AAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGG-----------AGGGAGGAAAGAAGGAAGAGAGAAAGA chr4 + 94230402 61683536 61683535 61683632 61683536 61683535 61683632 97 AAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAAAA .:....:......:x..:..:..-:x.:............:x..........:...x..-----------...:..:x.xx.....:x:......:. 23M1I35M11I27M 63/85 74.1% 97/94230402 0.0% 12/85 14.1% 115339951 74874604 +3153 chr4 + 190214555 177023489 177023488 177023576 88 AAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAGAGAGAAAGAAAGAA chr4 + 94230402 85790944 85790943 85791031 85790944 85790943 85791031 88 AGAGAAGACTAGATTAAAAGAAGAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAACCCAGAA .:....::xx...xx:......::.....:.......:..:..::.::::..:x::......:.x....x:x:.:......xxx.... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 91232545 NA +4173 chr4 + 190214555 177023509 177023508 177023639 131 AAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAGAGAGAAAGAAAGAA-------AGAAAGA---------GAAA-----GAAAGAAAGAGAGAAAGAAGGGATGGAGGGAGGGAGGGAAGGAAGGAAGGAA chr4 + 94230402 84536568 84536567 84536719 84536568 84536567 84536719 152 AAGGGAAAGGGAAAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAGTCATGTAGCAAAATTAGCAGTTGAAGTATTCAAGAGAAAGATAAACAGAAGGGACTGGGAGGAAGAGATTAAGAAGGCAAAAA ..:.:...:.:..::..:....x..x:...:x...:..x..:....:....:.:..:..:..:.....-------..x..:.---------...:-----:.:.......x.:.x........:x.:.:.:::...:xx.:.....x.::.. 68M7I7M9I4M5I52M 88/131 67.2% 152/94230402 0.0% 21/131 16.0% 92486941 NA +4438 chr4 + 190214555 177023520 177023519 177023882 363 AAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAA-------GAAGGAAGAGAGAAAGAAAGAA----------AGAAAGAGAAAGAAAGAAAGAGAG---AAAGAAGGGATGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGACAGAGAGAGAAAGAAAGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAA--GGAAGGAAAGACAGAAAAGAAAGACAAAAAGAAAGAAAGAAAAAA chr4 + 94230402 24794110 24794109 24794491 24794110 24794109 24794491 382 AAGAAAGGGGATACAGAAAAGAGGAGAACAAGCAGCTCTCATGGCAGAATAGCACAAGGAATAACAACCTATACGGGTTGGTAAAGGAATAAAAAGGACCAAAATAGAAGATGGGAAGAGAGGCAGAAGCTTGGTGAAGTAGTCAGAAAAGAAGTAAGACCCATTACGAAAGAGTG---GAGAAAGAAAAAACAGAGTGAGGAAAAGGGTAAAAAGAGTCCAGAGAAAGGGAAATGAGGAAAACATGAGAGGAAGCATGGAGGAACAGTTGGAAAATGATAGTAGAAAAAGGCACTAAACAATTAGGGTTAAAAAGAAACAAGAAAGAATAAGAGGAGCTTGAAGGGTAGGCAGGCCAACATTATTAAGTGGGAAGAAGCAAAAA .......:::.x.x:....:....::::x.:.x.:-------.:x:...x..x:x...:..x..----------:.:xx.:x....:..x...:..::---...x.:::.....:::...:.:x:....xxx..x::::x:.xx:....::...x....xxx.xx.x......xx.---..........:..x:...x....:.::.::x:..:::..xxx:..:::.:.....x:.:....:x.x..:..:...x.x.:.:...x::xx.:..:.x::x.:x.:.:....:x.xx.::x..xx....xx::.::..::x.:.:.:.:.x:::....:--x.....:x..:...:xx.:x.xx.:x..:x.::.::...x..... 35M7I22M10I24M3I75M3D159M2I45M 194/360 53.9% 382/94230402 0.0% 25/360 6.9% 152229410 37985145 +4080 chr4 + 190214555 177023692 177023691 177023900 209 GGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-----------------------------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAGGGAAGGAGGGA------GGGAGGGAGGGAGGGAAGGAAGGAAGGAAAGACAGAAAAGAAAGACAAAAAGAAAGAAAGAAAAAAGAAGGAAAGAGAGAAAGA chr4 + 94230402 31013792 31013791 31014035 31013792 31013791 31014035 244 GGGGTGGGGGGGGGACTGGGAGGAAGGTAAAGAGGTAGGGTAGTAAAAGTTAACTAAatatatatacatacatatatacacatacacatacgtatatatataGGAAGAAGAAAAAGAAAGATAGAAAAAATAATTGAGTAGACAAAAGGAAAGATTTGTTGGAACTGAGGAAGTTAAAGAAATCATACAAAAACAAAGCAAAAAATGAAGAGGACTGAAGGAAAAATAAGGCAAGTGAGAAAGA ...:x..:...:..:xx..:.......x.:::...x...:x..x..:.:xx..xx...x.x.x.x.x.x.x.-----------------------------.:...::.:.:.........x.....:..x::xx.::x:..x::.....::..------..:.xx....:..xx..:...:xx.x:x..:.xx:..:x:...:.::..:..:.xx:...:.....x....x...x........ 72M29I53M6I84M 127/209 60.8% 244/94230402 0.0% 35/209 16.7% 146009900 44204655 +3922 chr4 + 190214555 177023705 177023704 177023907 203 GGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAA--GGAAAGACAGAAAAGAAAGACAA--AAAGAAAGAAAGAAAAAAGAAGGAAAGAGAGAAAGAGAGAAAG chr4 + 94230402 59372550 59372549 59372755 59372550 59372549 59372755 206 GGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAA-AAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAAG ..:..:...x..x.x::.::.:.:x:.x..:...:..-...x.xx.....x..x:..x..x:....:..:..x:.x.:x..x..x..::..:.x..:..:..:.:::.:::.x::x:::.....:::x..x..x:..--..x...xx.x.....:..:.:..--.x..:......x..x....::x:..xxx:.x..:::..:.... 37M1D99M2I23M2I43M 117/202 57.9% 206/94230402 0.0% 5/202 2.5% 117651155 72563400 +3227 chr4 + 190214555 177023817 177023816 177023908 92 GGGAGGGAGGGAGGGAAGGAAGGAAGGAAAGACAGAAAAGAAAGACAAAAAGAAAGAAAGAAAAAAGAAGGAAAGAGAGAAAGAGAGAAAGA chr4 + 94230402 14577288 14577287 14577379 14577288 14577287 14577379 92 GGGGATGTGAGATAAAAGGAAGATGAGAGGGATAAAAGAGGAAGAGAGAAATGGGGAACTGAAAGAGTAGGCAGGAGAGAAGGGGTGAGAAA ...::x.x.:..x::.......:x::..::..:.:..:..:....x.:...x:::...xx:...:..x...x.:.......:.:.x..:.:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 162446529 27768026 +3105 chr4 + 190214555 177099751 177099750 177099800 50 ACATATATACACACATACATATATATGTGTATATGTATATGTATGTGTAT chr4 + 94230402 32744981 32744980 32745030 32744981 32744980 32745030 50 ATATAAATACATACATACACACAGGTGTGCATGTGTGTATGTATGTATAT .:...x.....:.......:.:.x:....:..:...:.........:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 144354770 45859785 +3197 chr4 + 190214555 177150311 177150310 177150419 109 TTAAAAAAAAAAAAAAAAAAAAAAAAAAGTCAATATCACTCCAAGTATATTTTCCAACCACAAAAAATAAAACCTAAATCAGTAACAATAAGA---------AAACAGAAAAATTCAC chr4 + 94230402 74184192 74184191 74184309 74184192 74184191 74184309 118 TTAAAAAAAAAAAAAAAAAGGATTAAAAATGAGAGTGGTTTCAAAAGCTATTGCCATGAACAAAAAAAAAAACCTGAAAGAGGAGCAAAGAAGCTGCTGTACAAATTGAAAAGTCCAC ...................::.xx....:.x.:x:.x::.:...:x::xx..x...xxx........x.......:..xx..x.:...x:.::---------...:x.....:.:... 93M9I16M 72/109 66.1% 118/94230402 0.0% 9/109 8.3% 102966119 87248436 +3061 chr4 + 190214555 177150315 177150314 177150371 57 AAAAAAAAAAAAAAAAAAAAAAAAGTCAATATCACTCCAAGTATATTTTCCAACCAC chr4 + 94230402 60849821 60849820 60849877 60849821 60849820 60849877 57 AAAAGAAAAAAAAAAAGAAAAAAAGTCAAAATTGTTCAGAAGGTATTTCCCTATTAC ....:...........:............x..:::..x:.:x:.....:..x.::.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 116300494 73914061 +3035 chr4 + 190214555 177157546 177157545 177157607 62 GCGACAGAGCGAGACACCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACA chr4 + 94230402 88382708 88382707 88382769 88382708 88382707 88382769 62 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAAGCACAATA ..:.x:....:.....x.x.........::.:..............:x.x.:..:x.x..:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 88774838 NA +3595 chr4 + 190214555 177164008 177164007 177164073 66 GTGGTGCACACCTGTAGTCCTAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .........:--......:.:.......:..:........x.xx.x...x..........::.:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 101130807 89083748 +3629 chr4 + 190214555 177184829 177184828 177185041 213 GGAAAGAAAAGGAAGGGAAGGGAGGGAAGGGA-GGAAAGAAAAGAAAGAAA-------GGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAG---AGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGTT chr4 + 94230402 78372803 78372802 78373023 78372803 78372802 78373023 221 GGAGAGCACTGAGAGGGGATAGAGCACAGGGGTGGGAAGAATTGAAAATAGAGGCTCTGGCATCAAGTAAAGGGAATGAAAACAAAGAGGGAAGGAAAG---GAATTAGAGAAGCAGAGAAATCAAAGGGAGGTTTAAGAGCAAAGCCAGCTTCGGTAGAGATCACAAGGAAAGAATAAAACCAAGAAGGAAAGGAGAATAAGAGCAACTGAGGGAGGGATATT ...:..x.xx.::....:.x:...x:x....:-..:.....xx....:x.:-------..x.xx..:x....::..x::...x.....::...:.....---...xx.:....:x.:.....xx:..:.:.:.---.::.:x....xx..xxxx:.x.:::.xx.x..:.......x:...xx.....:.....:.::.x.::.:x..xx:.:.:.:...x:.. 32M1I18M7I41M3D31M3I88M 125/210 59.5% 221/94230402 0.0% 14/210 6.7% 98812026 91402529 +4481 chr4 + 190214555 177184836 177184835 177185015 180 AAAGGAAGGGAAGGGAGGGAAGGGAGGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAA----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 34805279 34805278 34805462 34805279 34805278 34805462 184 AATGAAGGAGAAGGGCTGGGAGTGGGGAAAGATGAGGAAGGGAAAAAAAAATGTGAAAAATGGGGCACGAATGATAAAGCATGAAAAGAAAAGCACAGGGACAGGACAAAGGAGGAAGTAAAACACGGGGAAACTGAAGTGCCAAAGAAAAGAGAAAATGAGGGAAGAAGGCAGAGGAAAACAG ..x.:.:.:......xx..:..x.:.......x:..:...::.::...:..x.x:.:...x.:.:x.x:..x:.x:..----::.......::x.x.::..x..:.x:..:...:...x..:.x.x:.::.:.xx...:x:xx..::......:.:..x..::...::.::x.:..:..:.x.. 78M4I102M 104/180 57.8% 184/94230402 0.0% 4/180 2.2% 142379557 47834998 +3681 chr4 + 190214555 177184881 177184880 177185037 157 AAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAA---AGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA------AAGAAAGAAAGAAAGAAAGAAAGGA chr4 + 94230402 65771129 65771128 65771301 65771129 65771128 65771301 173 AAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAAAAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTAGAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGA ....:x...:::.x.:.:x...x.....x.....-------x.::.xx..x......x.x---....::xx:::....:........x:.....:......:x.x.:...xx::.:.......::.xx::.:x:..:.x...------:..:...::...:.:x...x..... 34M7I19M3I79M6I25M 99/157 63.1% 173/94230402 0.0% 16/157 10.2% 111413752 78800803 +3201 chr4 + 190214555 177184890 177184889 177184989 100 AAGAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGA------AAAAGAAAGAA chr4 + 94230402 64055796 64055795 64055901 64055796 64055795 64055901 106 AAGAAATGAAAAAGAAAGATGAAAAAGTTTTATTCAGAACAAACACAAAAATAGAGAATCACAGAGAAAAAAAAAAAAAAAAAGAATAATCTGTGAAGAGGAAGAA ......x..:.........x::...::xxxx.xxx.::.x.:.x.x...:.x......xx.x.......:...:...:........x:.------..:..:..... 89M6I11M 68/100 68.0% 106/94230402 0.0% 6/100 6.0% 113129094 77085461 +3359 chr4 + 190214555 177184890 177184889 177184971 82 AAGAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA .:....:.......x..x...x...x....x.:..:..xx.x.:.x.........::..x.x......x:..:..:::x... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 136072712 54141843 +3105 chr4 + 190214555 177184910 177184909 177184993 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAA--AGAAAAAGAAAGAAA-AAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241593 75241507 75241506 75241593 87 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...x..:..:x.:...xx.x...x.........:..:........:...:.x..:.--...:....x..:.x.-...::.x..x... 56M2I15M1I13M 61/84 72.6% 87/94230402 0.0% 3/84 3.6% 101943403 88271152 +3060 chr4 + 190214555 177184910 177184909 177184984 75 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGA chr4 + 94230402 41112178 41112177 41112252 41112178 41112177 41112252 75 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGA ..:..:::......x..x...x...x....x.:....:xx.x...x..........::.x.x...:.:x...:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 136072732 54141823 +3522 chr4 + 190214555 177184926 177184925 177185037 112 AGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------------AAAGAAAGAAAGAAAGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::.:xx.x.....:...:...........x.:.::xxx....xx:...x.:..x.x:..::.x:...:.:...:..:....:::..------------:...x.x...:...:... 94M12I18M 73/112 65.2% 124/94230402 0.0% 12/112 10.7% 126036547 64178008 +3042 chr4 + 190214555 177184934 177184933 177185013 80 AGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..:..:x:::.:xx.x...x.........:.::............:.x..:.xx.:......x..:.x.x..:.:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 101943427 88271128 +3417 chr4 + 190214555 177184934 177184933 177185026 93 AGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAA----AGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA ........::..xx.x.:.....:...:.........x....----....xx::..x.:..x.x:..::.x:...:.:...:..:....:::..::. 42M4I51M 62/93 66.7% 97/94230402 0.0% 4/93 4.3% 126036555 64178000 +3042 chr4 + 190214555 177184938 177184937 177185017 80 AGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 + 94230402 75241507 75241506 75241586 75241507 75241506 75241586 80 AGACAGGAAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGA ...x..::..x:::.:xx.x...x............:......:.:...:.x..:.xx.:......x..:.x.x..:.:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 101943431 88271124 +3155 chr4 + 190214555 177184939 177184938 177185007 69 GAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 + 94230402 56923931 56923930 56923999 56923931 56923930 56923999 69 GAGTGGGGAAACAAGAGAAAAAAAAGAAGAAAAAGAAATAAAGTTAAAAACAGAAGTGAATAAAGTAAG ..:x.:.:..:x........:...::............x...:xx...:.x....:x:..x....x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 120261008 69953547 +3328 chr4 + 190214555 177187864 177187863 177187936 73 GCGCATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACTTGAACCTGGGAGGCGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .:...:x......:...........::........x.xx.x...xx.........::.:..x:xx:..:..:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 101154660 89059895 +4025 chr4 + 190214555 177205688 177205687 177205766 79 CATGGTGGTGCATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCACTTGAGCCCAGGAGGTTGAGGCT chr4 + 94230402 76033197 76033196 76033273 76033197 76033196 76033273 77 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCT ..::........:.--...:..:...........::........x:xx.x...x.......:.....:..x..x:.... 14M2D63M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 101172491 89042064 +3440 chr4 + 190214555 177219499 177219498 177219566 68 AGGGAGAGGGAGAAGAAAGAAAGAAGAAGAAGAGGAAG-AAGAAGAAGAGGAAGAGGAAGAGGAAGAAG chr4 + 94230402 84536569 84536568 84536636 84536569 84536568 84536636 68 AGGGAAAGGGA-AAGAAAAAAATAACAAAAATAGGAAGTGAAGAAAAAAGGGAAAGGGAGAGGAAGAAG .....:.....-......:...x..x..:..x......-:.::.:..:...:.:...:........... 11M1D26M1I30M 53/67 79.1% 68/94230402 0.0% 2/67 3.0% 92682930 NA +3849 chr4 + 190214555 177224714 177224713 177224796 83 CGTGGTGGTGCACATGTGTGGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCAC--GTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........--....:..:.......:...::........x.xx.x...x::...........:..x:xx:..:..... 13M2D68M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 101191517 89023038 +3584 chr4 + 190214555 177243556 177243555 177243627 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.:...........:..x:xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 101210350 89004205 +3127 chr4 + 190214555 177245242 177245241 177245315 74 GTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGAGGATCACTCGAGCCTGGGACATCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........::::.......:x:xx.x.:.x....:..:..::.:.xx.:x:.....:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 101212038 89002517 +10314 chr4 + 190214555 177245962 177245961 177246173 212 CGTAGTGAATACCCATTTGTAAACAAAGTGGTGATACATTATGATAGCCAAAGGGCAAAGCTTTACCTGAACAGAGATTCATCATCTTTT-AATGCAGCACAGCTTGCTACTTGCAATATCATCAAGCACTCTGAAAGGTTC-TTGTCAGAGATTGATGACCTAAACAGTCACTGAAACTTAATAACAGCGTTAACAACTGCAGGTCGATCTCA chr4 + 94230402 46102108 46102107 46102316 46102108 46102107 46102316 209 CATGATGAATACCCATTTATAAACAAAGTAGTGATTCATTATTACAGCTGAAGGGCACTGTTTTACCTGGATGTAAACCCACCATTTTTTAAACGCCTCACAGCTTGATGCTTGAAATCCCATTGAGCACTCTGAAAGCTTTGTTGACATGGACTGATGTTCCAAACAATT-----AACTTAATAACAGCATCAACAACTGGCGGTTAGTTTCA .:.::.............:..........:.....x......x.:...::.......xx.:........:.::x.:.::..:...:....-..:..xx.........x.:....x...x:...::.............x..:-...x..x:..:.....x:.:.....:.:-----..............:.:........xx...:::.:... 90M1I51M1I28M5D38M 156/207 75.4% 209/94230402 0.0% 7/207 3.4% 131143854 59070701 +6512 chr4 + 190214555 177264479 177264478 177264704 226 TGAGGAGCTATGAATCATGTTAAAGATATAAAGGGATTACTGATAAG-----GCCTAA-ATTTTTTTCAACCTAACAGCTGTGCAGAAAA-ATTTTCATAATGCTTGCATTTAATTACATAAAGAGTGGTACAGTCTCTTTCACTTTATCTCAGTAATGAAGGCTTGATTCTGA-----------AGATAATCCAGGG---TCTTTCCCTGTCAAGGCCAGCATGTGGGTAACAGTGAATTCAATTC chr4 + 94230402 46106588 46106587 46106834 46106588 46106587 46106834 247 TGAGAATCTATGAATTATATCAGAGATTTAAAGGGATTACTGATGAGAAAGAGCATAATCTTTTTTCCAATACAACAGCTGTTAAGAAGCTGCCATAATAACAGTTACTTTTAATTAAGTGCATAACTGCAAAGCCTTATTAGCTCCATATCAATTATGCAGCTGTGATTTAAAAGTTACTAAATAGATAATCTTCAGCTTTTTTTTTTTGTTAAGGCCAATTTATGAACAGTGGTGATTTCAATCC ....:.x........:..:.:.:....x................:..-----..x...-x......:...:x:.........xx....:x-:::x.x....::x..:.x........x:.:x.x.::x.:.x..:..:x..x:..::..x...:.x...x..x:x.....:x:.-----------........:xx:.---.:...:::...:.......::x.:..:::.:::....x......:. 47M5I6M1I31M1I83M11I13M3I46M 150/226 66.4% 247/94230402 0.0% 21/226 9.3% 131157891 59056664 +3088 chr4 + 190214555 177273684 177273683 177273735 52 TGCATAAATACTCCTAGCTTTTTAGCTTTCTTTCTTTTTTTTTTTTTCTTTT chr4 + 94230402 14667805 14667804 14667856 14667805 14667804 14667856 52 TGCACAAGTGCTTCTACCTCTTCACCTTTCTTTCTTTCATTTTTTTTGTTTT ....:..:.:..:...x..:..:.x............:x........x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 162605879 27608676 +3043 chr4 + 190214555 177320934 177320933 177321025 92 TTTAGTGGAAGAATAGTGTCTGTCTCTTTTTTTTTTTTTTCTTTATCTCCCTGTTATCTCTCTTTGAGCTAAGTACTGTGATTGTATCTTAA chr4 + 94230402 91360425 91360424 91360516 91360425 91360424 91360516 92 TTTATTAAAGATATAATATCAACTTCTTTTTCTTTTCTTTATTTATTTCTTCTTTCCCCCCCCCCCCCATAAGGACTGTTACTGCATCTTGA ....x.::.::x...:.:..x:::.......:....:...x.....:..:::x..x:.:.:.:::xxxx....x.....x.:..:.....:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 85960509 NA +3136 chr4 + 190214555 177364789 177364788 177364870 82 GTGGTGGCTCACACCTGTAGTCCCAGCTACTGTGGAGGCTGAGGCAGTAGAATCGCTTGAACCTGGAAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........xx::........x.xxxx...x.:........::....x.xx:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 101331588 88882967 +3246 chr4 + 190214555 177370772 177370771 177370843 72 GCACCTGTAGTCCCAGCTATGTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCAGGGAGGTCGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.......:x..::........x:xx.x.:.x.......:..x:.:..x.:x:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 101337566 88876989 +3245 chr4 + 190214555 177386738 177386737 177386825 88 TTTATATATACACATACATACACACACATACACACACACAAACATATATGCATACATATCCATATCCAT-----ATATTATATATACATACAT chr4 + 94230402 54963191 54963190 54963283 54963191 54963190 54963283 93 TTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT ...:.....x..:.:.x..:.....x:...:.........x.xx:.::...::x....:x..:...:..-----..x:.x.x.x......... 69M5I19M 61/88 69.3% 93/94230402 0.0% 5/88 5.7% 122423547 67791008 +4493 chr4 + 190214555 177422642 177422641 177422878 237 AAAGGAATGATGAGAGGGCACATAATTTTTTAAATTATTATTTTTAAATATTTGAAAGAAAACTATATAGTATATACATATATATTGTATA--TATGTATATAT-------------TGTATATATATTGT-----ATATATGTAATATGTATGTATATAAATACATACATATATATACA------------------------------TAAATATGTGTGTGTGTGTGTATATACATACATACACATATATATATATATGTATTTTTTTTTTTGAGACAGAGCTT chr4 + 94230402 68836879 68836878 68837158 68836879 68836878 68837158 280 AAAGTGAGAAAGAGAGAGAA-ATTTCTTTTCCAATCAGGtttttaaaatatttttaatagtaaaatattcttaatatatatttttttCACAGTTATGTGCCTTTCTGATCAGAAGTTTGCAAGTATTTTGCTGTGGATAGTTACAGTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACATTTTTAT------CAGAACTT ....x:.x:.x.....:.x.-..xx:....:x...:.xxx....x........xx..x.:x.xx....xx.xx...:....x.x..x:.:.--.....::x.x.-------------..:.x:...x...:-----...xx.::.:.x::.:........x...........:x..:...------------------------------...:x.:.....:........:.:....:...x.:.....:...:.:..::::.:x.....x.------....:... 20M1D70M2I11M13I14M5I44M30I63M6D8M 154/230 67.0% 280/94230402 0.0% 57/230 24.8% 108585763 81628792 +3489 chr4 + 190214555 177422709 177422708 177422779 71 TAGTATATACATATATATTGTATATATGTATATATTGTATATATATTGTATATATGTAATATGTATGTATA chr4 + 94230402 22101361 22101360 22101428 22101361 22101360 22101428 68 TAGTATATATTTGTATATTGTGTATGTGTATATGTTGTATATATGCAGCCCATTTG---TATGAATGCATA .........:x.:........:...:.......:..........::x.:x:..x..---....x...:... 56M3D12M 53/68 77.9% 68/94230402 0.0% 3/68 4.4% 155321348 34893207 +3193 chr4 + 190214555 177428291 177428290 177428369 79 GTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x......:...........::........x.xx.x...xx::x.........:..x.xx:.x:..:.. 6M2D71M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 101395090 88819465 +3620 chr4 + 190214555 177439241 177439240 177439321 81 CATGGTGGCACGTGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGT chr4 + 94230402 76033197 76033196 76033275 76033197 76033196 76033275 79 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ..::....::.::.--....:.:...........:.........x:xx.x...x.............:..x:xx:..:... 14M2D65M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 101406044 88808511 +3990 chr4 + 190214555 177453323 177453322 177453422 100 TTGCTTTTCATTTGCCTTCCTTTTTTCCTTACTTCTTTTTCCCTCCCTGCCTCTTCCTTCCTCCCTTCTCTTTTACTTTTTCCTCTCCCCTTCCCTACTC chr4 + 94230402 38895900 38895899 38895999 38895900 38895899 38895999 100 TTGCATCACCTCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTC ....x.:x.x.:.x::....:.:x.x..::.:..:.....:...::...:x...........:....x.x.x......:.:....::.:::.xx:..... 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% 138557423 51657132 +3054 chr4 + 190214555 177471828 177471827 177471910 83 CGTAGTGGCGGGCACCTGTAGTCCCAGCTACTGGGCAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.....:.--...x......:.........x.:x........x.xx.x...xx:.x.......:....x.xx:.x:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 101438631 88775924 +3248 chr4 + 190214555 177481456 177481455 177481521 66 GTGGTGCTTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGGATCACTTGAGCCTAAGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .......x:.--......:...........::........x.xx.x.:.x.......:..:.::.. 10M2D54M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 101448255 88766300 +3232 chr4 + 190214555 177481889 177481888 177481945 57 TACACATATTTTTTG-TATATATACACATACATATGTATTTATATATATATATATATA chr4 + 94230402 41743180 41743179 41743237 41743180 41743179 41743237 58 TGCACATGTATTTTAATTTATATACACATACATCTGTATTTATATATATGTGCATTTA .:.....:.x....:-.x...............x...............:.::..x.. 15M1I42M 47/57 82.5% 58/94230402 0.0% 1/57 1.8% 135738709 54475846 +3004 chr4 + 190214555 177481892 177481891 177481963 72 ACATATTTTTTGTATATATACACATACATATGTATTTATATATATATATATATACATATATATATACACACA chr4 + 94230402 56867292 56867291 56867363 56867292 56867291 56867363 72 ATACATATTGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .:.:..x..x...:.:x.....:.:......::.::x......x.:.::..:..:...:.x:...::..... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 120614600 69599955 +3124 chr4 + 190214555 177481955 177481954 177481993 39 ATACACACACACACACACACATATATATATAAATTAACT chr4 + 94230402 67665832 67665831 67665870 67665832 67665831 67665870 39 ATATATACATACACACACACACATATATATAAATTAACT ...:.:...:...........:................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 109816123 80398432 +3049 chr4 + 190214555 177510338 177510337 177510417 80 AAAGAATTGTATTTCCTTGGGTAGATACCTAGTAATGGGATTGCTGGGTTGGATGACGGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 91830525 91830524 91830589 91830525 91830524 91830589 65 AGAGAGTTGGATTTTTTT---------------AATGGAATTTCTGGGTTGTTTGGGGCTTTTTTTTTTTTTTTTCTTTT .:...:...x....::..---------------.....:...x........xx..:x.x................:.... 18M15D47M 52/65 80.0% 65/94230402 0.0% 15/65 23.1% 85679813 NA +3575 chr4 + 190214555 177516496 177516495 177516567 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...x.........:::.:..x:xx:..:..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 101483290 88731265 +3283 chr4 + 190214555 177520443 177520442 177520501 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATGATGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::..........xx.x...xx.:x.......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 101487237 88727318 +3119 chr4 + 190214555 177521193 177521192 177521246 54 CTCAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 90030073 90030072 90030126 90030073 90030072 90030126 54 CTGAAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ..x...x.......xxx:...::..............:.:.:............ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 87491120 NA +3347 chr4 + 190214555 177521194 177521193 177521255 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:....x..........:.:..:...:.....x.:.::.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 176026200 14188355 +3320 chr4 + 190214555 177521196 177521195 177521280 85 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACATATATATACACACACAC chr4 + 94230402 78347565 78347564 78347647 78347565 78347564 78347647 83 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA-ATGCAGCTAC-CACACAC .....x..x....x...x..:.....x.:xx.:.:.xx..:.........:............x..-..::.xx...-....... 66M1D10M1D7M 63/83 75.9% 83/94230402 0.0% 2/83 2.4% 99173631 91040924 +3291 chr4 + 190214555 177521196 177521195 177521251 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x...::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 176026196 14188359 +3040 chr4 + 190214555 177521198 177521197 177521249 52 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACA chr4 + 94230402 1495004 1495003 1495055 1495004 1495003 1495055 52 AGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.........x.:......x.x......:.:..:...:.....x....:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 176026194 14188361 +3383 chr4 + 190214555 177521198 177521197 177521253 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x.:.::.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 176026198 14188357 +3113 chr4 + 190214555 177521206 177521205 177521267 62 AAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACATATA chr4 + 94230402 74671056 74671055 74671117 74671056 74671055 74671117 62 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA ..:..x.x.x.....x..xx.:................:.:...........x.x.x.x... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 102850150 87364405 +3684 chr4 + 190214555 177521209 177521208 177521320 112 AAAAAAAAAAAAATATAT-----ATATATATATATATATATATACACACACACACACACATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATAT chr4 + 94230402 54005667 54005666 54005782 54005667 54005666 54005782 116 AGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT-TAGCTTTATACATGT .:..xx..x...x.....-----.:....:...x........:.:.............x.x..x.:.x.xxx::....x.x.xx............x..:.-..xx.x..:....:. 18M5I78M1D15M 80/111 72.1% 116/94230402 0.0% 6/111 5.4% 123515542 66699013 +3281 chr4 + 190214555 177521220 177521219 177521277 58 AATATATATATATATATATATATATATACACACACACACACACATATATATACACACA chr4 + 94230402 61270778 61270777 61270835 61270778 61270777 61270835 58 AATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA .......x.:.......:......:::..::.....x....x...:....x::..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 116250442 73964113 +3183 chr4 + 190214555 177521255 177521254 177521321 67 ACACACACATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATATA chr4 + 94230402 22600198 22600197 22600264 22600198 22600197 22600264 67 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCA .......:..x:.:..:..x.....:::...:.x.x.........:x...:.:.:....::...::. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 154921057 35293498 +3011 chr4 + 190214555 177521400 177521399 177521485 86 CACACATATATATACGTATGTATGTGTGTGTATATATATACATACACACATATATATGTTCTTGTTGTTCAACTCCCACTTATGAG chr4 + 94230402 29797140 29797139 29797225 29797140 29797139 29797225 86 CATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCTACGTTGAGCTGTACCTCATGGG ..:.....::...:...:.........:x:........:...:.x.x.x..x.x.::x..:.:xx:...x.:..x:xx..:...:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 147724260 42490295 +3058 chr4 + 190214555 177540805 177540804 177540863 59 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x....:.:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 101507599 88706956 +3021 chr4 + 190214555 177547270 177547269 177547337 68 ATGTGTATATTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTGTTCTATTT chr4 + 94230402 65759976 65759975 65760043 65759976 65759975 65760043 68 ATATCTACTTTAGATTTGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTT ..:.x..:x...x..x....x..:...:........::.:::...x.....:.::..x...x...:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 111787294 78427261 +3312 chr4 + 190214555 177549760 177549759 177549829 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCGAGAGGCTGAGTCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:.........:..:........:.xx.x...xx:.x.......:.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 101516563 88697992 +3256 chr4 + 190214555 177556790 177556789 177556858 69 CAAAAATATAATTCTTAACTTTTTCACATCCAGTTTCTTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTT chr4 + 94230402 22344052 22344051 22344120 22344052 22344051 22344120 69 CAAGAAAAAAGCTTATGAGTCCTTCATTTCCAATTTCATTTTACCTTTTCTTTTTTTCTTTTTTTTTCT ...:..x.x.::.:x.:.x.::....:x....:....x....x.:...........::.........:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 155212738 35001817 +3399 chr4 + 190214555 177620976 177620975 177621046 71 CACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.........:.::........x.xx.x...xx:...........:..x:xx:..:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 101587769 88626786 +3086 chr4 + 190214555 177624830 177624829 177624892 63 GACATTTTGCTTTCTGTGAATTGGCTATTCATTTTTTGCCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 79556731 79556730 79556793 79556731 79556730 79556793 63 GGCATTGAGCTACCTGGGAAATCACTATTCATTTTGTGTATTTTGTTTTTCTTTTCTTTTCTT .:....xx...x:...x...x.x:...........x..:x....x.....:....:....:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 98068099 92146456 +3087 chr4 + 190214555 177628234 177628233 177628293 60 CCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTGACACAGAGTCTTGCTCTG chr4 + 94230402 38525370 38525369 38525428 38525370 38525369 38525428 59 CCCTCCCTCT-TCTTTTTCTCTCCCTCTCTCTTTTTTTTTTGGAACAGTATTTTGTTTTG ..:.::....-...:.:......:........:.:.......:x....x:.:...:.:.. 10M1D49M 44/59 74.6% 59/94230402 0.0% 1/59 1.7% 139102864 51111691 +3105 chr4 + 190214555 177645796 177645795 177645883 88 ACATATATATATATATATATATATATATATATATATATATACACACACACACATATATATGTATGTATGGTTTAGAAAGAGGGTCTAT chr4 + 94230402 61270769 61270768 61270855 61270769 61270768 61270855 87 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACA-GCTGCAGCAAAATGGTGCAT ...xx:..:x......x.:.......:......:::.::......x....x...:....x...:::.-.x.x:..x..:.x...x:.. 67M1D20M 59/87 67.8% 87/94230402 0.0% 1/87 1.1% 116375027 73839528 +3028 chr4 + 190214555 177645799 177645798 177645858 60 TATATATATATATATATATATATATATATATATATATACACACACACACATATATATGTA chr4 + 94230402 58675386 58675385 58675445 58675386 58675385 58675445 60 TACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA ..:.:..x.x.:...::.........:.:x:....:.:.........x..x......x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 118970413 71244142 +3141 chr4 + 190214555 177667767 177667766 177667837 71 CATGGTGGCAAGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGAAGGAGAATCACTTGAATCCGGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..::....:--.::.x....:.:...........::........xxxx.x...x........:..:..:.. 9M2D60M 50/69 72.5% 69/94230402 0.0% 2/69 2.9% 101634570 88579985 +3007 chr4 + 190214555 177675044 177675043 177675089 46 TTTTTTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAG chr4 + 94230402 29671947 29671946 29671992 29671947 29671946 29671992 46 TTGTTTTGGTTTTTTTTTGTTTGTTTGTTTGTTTTTTGGGGGGGAG ..x.....x.x...x.......................:.:x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 148003097 42211458 +3143 chr4 + 190214555 177678011 177678010 177678061 51 TTCTTCCTCTTTTCTCCTTCCTCTCTCCCTCCCTCCTTTCTTCCTTCCTTC chr4 + 94230402 17044276 17044275 17044326 17044276 17044275 17044326 51 TTCTTTTTCTTTTCTTCTTCCCCCCTCCCCCCCCCCCCCCATCTTTCTTTC .....::........:.....:.:.....:...:..:::.x..:...:... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 160633735 29580820 +3390 chr4 + 190214555 177683069 177683068 177683151 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTTCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x............::..x.xx:..:.x:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 101649872 88564683 +3186 chr4 + 190214555 177696137 177696136 177696210 74 GTGTGCCTGTAATCCCAGCTACTGGAGAGGCTGAGGCAGGAAAATCGCTTGAACCGGGGAGTCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....:.:.........x..:........x.xx.x:..x.:........x:.:..::xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 101662933 88551622 +3322 chr4 + 190214555 177703595 177703594 177703666 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x.xx.x...x::........::.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 101670389 88544166 +3075 chr4 + 190214555 177709324 177709323 177709356 33 AAACAAACAAACAAAACAACAACAACAACAAAA chr4 + 94230402 31988810 31988809 31988842 31988810 31988809 31988842 33 AAACAAACAAACAAAACAACAACAACAACAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 145720514 44494041 +3007 chr4 + 190214555 177724539 177724538 177724607 69 TGTTTCTTTTGTGTGTGTGTGTGTTTTTTTGTTTGTGTGTTTGTTTGTTTGTTTTTTTGGTTTTTTTTT chr4 + 94230402 34676445 34676444 34676513 34676445 34676444 34676513 69 TGGCTCTTCTCTCTGGAAAGGGGATTTTGTGTTGGTGGGTTTGTTTGTTTGTTTTGTGGGGTTTTTTTT ..x:....:.x.x..x:x:x.x.x....x....x...x.................x.x..x........ 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 143048094 47166461 +3172 chr4 + 190214555 177724552 177724551 177724605 54 TGTGTGTGTG-TTTTTTTGTTTGTGTGTTTGTTTGTTTGTTTTTTTGGTTTTTTT chr4 + 94230402 14858181 14858180 14858235 14858181 14858180 14858235 55 TGTCTTTGTGATTTTTTTGCTTGTATGTTTGTTCTTGTGTTGTTTTGGTTTTTTT ...x.x....-........:....:........:x.x....x............. 10M1I44M 46/54 85.2% 55/94230402 0.0% 1/54 1.9% 162866371 27348184 +3217 chr4 + 190214555 177724559 177724558 177724610 52 GTGTTTTTTTGTTTGTGTGTTTGTTTGTTTGTTTTTTTGGTTTTTTTTTGAG chr4 + 94230402 43031791 43031790 43031842 43031791 43031790 43031842 52 GTTTCCTTGTGGTTTTTTGTTTGTTTGTTTATTTTTTTGGTTTTTTTTGGAG ..x.::..x..x..x.x.............:.................x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 134692768 55521787 +3344 chr4 + 190214555 177737972 177737971 177738049 78 ATAGAAAGCCATATATGTATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAAACAATG chr4 + 94230402 49681657 49681656 49681733 49681657 49681656 49681733 77 ACAGTAAGTTGTACACAT-TTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGATTTACACAGTG .:..x...:::..:.::.-.x.:.:..x..:.:.:..:..........x..................xxx.x...:.. 18M1D59M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 128056315 62158240 +3457 chr4 + 190214555 177737985 177737984 177738054 70 TATGTATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAG-AGAAACAATGTTACA chr4 + 94230402 87420509 87420508 87420579 87420509 87420508 87420579 71 TATGTGTGTGTGTATATGTGTGTGCGAAAGAGTGTGCGCTGAGAGAGAGAGACTGCAAAAAAAATGTTGTA .....:..................:.x:x.x.....:.:xx...........xx.-.:...x......::. 55M1I15M 54/70 77.1% 71/94230402 0.0% 1/70 1.4% 90317476 NA +3146 chr4 + 190214555 177780892 177780891 177780974 83 CATGGTGGTTTGCACCTGCAGTCCCAGCTACTCGGGATGCTGAGGCACGAGAATTGCTTGAACCTGGGAGGAGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....--....x..:...:.........:.::.x......x.x:.x...x::........::.:..xxxx:..:..:.. 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 101747695 88466860 +3044 chr4 + 190214555 177789068 177789067 177789143 76 AAGAAAGCTATAAACAGCACAAATTTTGCTCTAAGTTTCCCTGTGTCCTCTCTCCCTCTCTCCCTTCCCCCTCCCC chr4 + 94230402 26884295 26884294 26884370 26884295 26884294 26884370 76 AGAAAAGCAGTAAATAGAATAAGTTTCACAGTCTGTGTTTTTGCTTTTGCTCTCTCTCTCTCCTTCCCCCCCCCCC .::.....x:....:..x.:..:...::.xx.xx..x.:::..:x.::x.....:........:.:.....:.... 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 150904773 39309782 +3086 chr4 + 190214555 177870294 177870293 177870360 67 AAATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAACAAAAAACAAAAAACAAAA chr4 + 94230402 38816095 38816094 38816160 38816095 38816094 38816160 66 AAGTCTTAAAATTAAAAAAACAAAACAAACAAAAAAAACCCCATAAAACTCAAAA-AGAAAACATAA ..:...x....xx.......x....x...x...........x.x.....xx....-.:......x.. 55M1D11M 53/66 80.3% 66/94230402 0.0% 1/66 1.5% 139054199 51160356 +3056 chr4 + 190214555 177870322 177870321 177870363 42 AAAAAAAAAACCCAAAAAAACAAAAAACAAAAAACAAAAAAC chr4 + 94230402 32283598 32283597 32283639 32283598 32283597 32283639 42 AAAAAAACAACACAACAAAACAAAAAACCAAAAACAAAAAAC .......x...x...x............x............. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 145586724 44627831 +3248 chr4 + 190214555 177928732 177928731 177928773 42 AAAAAAAAAAAAAAAGAAAAGAAAAAAGAAATATTTTACAAT chr4 + 94230402 65482561 65482560 65482602 65482561 65482560 65482602 42 AAGAAAAAGAAAAAAGAAAAGAAAAAGGAAACATTTTACAGT ..:.....:.................:....:........:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 112446171 77768384 +3142 chr4 + 190214555 177938044 177938043 177938125 82 TTTTCTCCTGATGGTGATATTTTATATATATATGCGTATATATATATATGTGTGTGTGTGTGTGTATATGTATATATGTATA chr4 + 94230402 15015644 15015643 15015725 15015644 15015643 15015725 82 TTTTCTTCTGATTTTCTTAGTTATTAAATTTAAGCATGTATGTATATGTGTGGGTGTGTATGCATATGCATAGAAACCTATA ......:.....xx.xx..x..xx..x..x..x..:.:...:.....:....x......:..::...:::..x.x.:x.... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 162922400 27292155 +3097 chr4 + 190214555 177938094 177938093 177938150 57 TGTGTGTGTGTGTGTATATGTATATATGTATATGTGTGTGTGTATATATATATATAT chr4 + 94230402 86633924 86633923 86633980 86633924 86633923 86633980 57 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTAT ..x.:...:...:...x:.:...:.x......::..:...........:..x.:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 91304170 NA +3311 chr4 + 190214555 177942990 177942989 177943104 115 ATGCACACCCATGTTCCGTG-TTCTG--------CTAATTGTTTTTTTTGTTTTTTTGTTTTTTTTTTTTGAGAGCCAGGGTCTCACTTTATAGCCCTGGCTGGTCTC---------AAACTCCTGCCTTCAG chr4 + 94230402 71484217 71484216 71484337 71484217 71484216 71484337 121 ATGCAAATCCAAGCTTTTTGCTTCTAAATGAAGTCTGGTTGTTTTTGTTGTTCTTTTTTTTTTTTTTTTTGAGAGCTA---------CTGGTAGCCT---CTGGTCTTTTGTCTAAAGAACTTCTGATTTCAG .....x.:...x.:.::x..-....:--------..::........x.....:....x..................:.---------:.x:.....:---.......:---------:....:...x:..... 20M1I5M8I44M9D10M3D8M9I16M 80/103 77.7% 121/94230402 0.0% 30/103 29.1% 106458773 83755782 +11965 chr4 + 190214555 177959722 177959721 177959935 214 AGAAGGAACTATTTAGAGGCAAATGCTATTCAAGTACTGTTCCACAGAAATAGAAAGGTACAATGTCA-TGGTGTTTGGAAGTGAACTGATGATGCATTGCACTAGCATATAGAGACATTGTTCCCATAAAACTTGTAACATTATAGTTCAGGGACTATTTAACCTTTAATACAAATCATTTTTATTGTCCCAATAGAACTCGCAACACTTTATT chr4 + 94230402 43449857 43449856 43450069 43449857 43449856 43450069 213 AGAAGAACTGCCTCAGAGGTAAGTGGTATCCAAATATTGTTCTGTAGAGATA--AATGTACAGTGTCAGTGGTATTCGGTTGTGGATTGATGATGCATTGCACAAGGATATAGACACATCAGTCCTGTAAAACTTGTAACATTACAGTTTAGGGAATATTTAACCTTTAATACAAATCATTTTTATTTCCCCTCTGGAATTCAAAGCACtttatt .....:.x:xx:.:.....:..:..x...:...:..:.....:::...:...--..x.....:.....-....:..:..xx...:.:................x..x.......x....::x...::.................:....:.....x...............................x:...xx.:...:..:x.:......... 52M2D14M1I146M 167/212 78.8% 213/94230402 0.0% 3/212 1.4% 134509865 55704690 +3430 chr4 + 190214555 177970700 177970699 177970761 62 TGTATATATGTATATGTTTATACACGCATGTATATGTATATGTACACATATTCATGTATATG chr4 + 94230402 76709592 76709591 76709653 76709592 76709591 76709653 62 TATATATATGCATGTGTTTATACAAGCATTCACATGTATGTGTATCTGTGTTTATATATCTG .:........:..:..........x....x:.:......:....:x::.:..:..:...x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 101261108 88953447 +3574 chr4 + 190214555 177970711 177970710 177970843 133 ATATGTTTATACACGCATGTATATGTATATGTACACATATTCATGTATATGAATATATGTACACATATACATGTATATGAATATATGTACACATATACATGCATGTATGCATATGTATATACATATGCATGCA chr4 + 94230402 21109187 21109186 21109299 21109187 21109186 21109299 113 ATTTGCTTATACATG------TGTGTCTCTGTGGGCGTATTTAT--------ATGTACTCACATATACTCGTGTACCTATACGTATGTACTCAT------GCTTCTGTGTATATGTGTATGAATATGCATGCA ..x..:.......:.------.:...x.x...:x:.:....:..--------..:..:x:...:...:x.:....:x.:x.::.......x...------..x.x.:..:......:...:x........... 15M6D23M8D42M6D33M 80/113 70.8% 113/94230402 0.0% 20/113 17.7% 156861524 33353031 +3452 chr4 + 190214555 177970749 177970748 177970854 106 ATTCATGTATATGAATATATGTACACATATACATGTATATGAATATATGTACACATATACATGCATGTATGCATATGTATATACATATGCATGCATGTATGCATAT chr4 + 94230402 66286761 66286760 66286866 66286761 66286760 66286866 106 ATTTACTTTCACCAACACGTGTGAATGTATGTGGACATTTGAATATATGAGCACATACATGTGCATATCTGCACACCTGTGCATGTGTACACCAGTGTATGCTTAT ...:.:x.x:.:x..:.::...:x.::...:::x::..x..........x:......:.::.....:.x....:.:x.:.::.::.:.:..:xx:.......x... 106M 63/106 59.4% 106/94230402 0.0% 0/106 0.0% 111683988 78530567 +3664 chr4 + 190214555 177970753 177970752 177970858 106 ATGTATATGAATATATGTACACATATACATGTATATGAATATATGTACACATATACATGCATGTATGCATATGTATATACATATGCATGCATGTATGCATATGTAT chr4 + 94230402 25672279 25672278 25672379 25672279 25672278 25672379 101 ATATATATGTATATATG---GCATAAAGAGAAAAATG--TGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT ..:......x.......---:....x.x.x:x.x...--.:.....:x:::..x.:x.:.xx:......:..:..:.::...........x...:........:.. 17M3D17M2D67M 71/101 70.3% 101/94230402 0.0% 5/101 5.0% 152298474 37916081 +3513 chr4 + 190214555 177982898 177982897 177982971 74 GTGCGCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........x.::........x.x..x...x::........::.:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 101949694 88264861 +3014 chr4 + 190214555 177996550 177996549 177996596 47 CTGTTTTTTTTTTTTTGGTTTTTTTTTTGTTTGTTTTTTTGTTTTTT chr4 + 94230402 48643517 48643516 48643563 48643517 48643516 48643563 47 CTATTCCACTTTTTTGGGTGTTTTTTTTGTTTGTTTGTTTGTTTTTT ..:..::x:......x...x................x.......... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 129353033 60861522 +3059 chr4 + 190214555 177996556 177996555 177996624 69 TTTTTTTTTTGGTTTTTTTTTTGTTTGTTTTTTTGTT---TTTTTTTTTACCTTTAAGAAGCCTTGGAAGAA chr4 + 94230402 55690034 55690033 55690101 55690034 55690033 55690101 68 TTTCTTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCCCCAAGGAAG----AGAAGAA ...:..::...:...............:..x......---....x....x..::x.:....----:...... 37M3I21M4D7M 52/65 80.0% 68/94230402 0.0% 7/65 10.8% 122306522 67908033 +3039 chr4 + 190214555 177996556 177996555 177996596 41 TTTTTTTTTTGGTTTTTTTTTTGTTTGTTTTTTTGTTTTTT chr4 + 94230402 22701651 22701650 22701691 22701651 22701650 22701691 41 TTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTT ...:.x..x.....................x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 155294905 34919650 +3075 chr4 + 190214555 177996556 177996555 177996601 46 TTTTTTTTTTGGTTTTTTTTTTGTTTGTTTTTTTGTTTTTTTTTTT chr4 + 94230402 41855249 41855248 41855294 41855249 41855248 41855294 46 TTTTATTTTGGGGCTTTTTTTTGTTTGTTTGTTTGTTGTTTTTTTT ....x....x..x:................x......x........ 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 136141307 54073248 +3079 chr4 + 190214555 178014723 178014722 178014785 63 ATAGTTGTGTGTGTGTGCATATATATATATATATATATATATATATAAAACATAACTATAAAT chr4 + 94230402 83657514 83657513 83657575 83657514 83657513 83657575 62 ATGTCTGTCTGTGTGTGCATATATATATATTTCTCTATATATATTTAAGAAAT-GCTATGGAT ..:x:...x.....................x.x.x.........x...:.x..-:....::.. 53M1D9M 49/62 79.0% 62/94230402 0.0% 1/62 1.6% 94357209 NA +3408 chr4 + 190214555 178030690 178030689 178030763 74 ATATATATATATATATATATATATATATATATATACACACACACACACACACA-----------CACATATATACACATATATAT chr4 + 94230402 23247722 23247721 23247806 23247722 23247721 23247806 85 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..:.:.:...::.:.:.:..x...:x.:....:........:...........-----------:....:x...x.:........ 53M11I21M 55/74 74.3% 85/94230402 0.0% 11/74 14.9% 154782968 35431587 +3108 chr4 + 190214555 178030700 178030699 178030766 67 ATATATATATATATATATATATATACACACACACACACACACACACATATATACACATATATATACA chr4 + 94230402 61270775 61270774 61270841 61270775 61270774 61270841 67 ATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ..:x......x.:.......:....:..:...::.....x....x...:....x::.:.:.xx.:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 116759925 73454630 +3036 chr4 + 190214555 178030705 178030704 178030744 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 173621623 16592932 +3005 chr4 + 190214555 178030707 178030706 178030747 41 TATATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT .:..:.............:.........x.x.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 173621625 16592930 +3039 chr4 + 190214555 178030714 178030713 178030764 51 ATATATATATACACACACACACACACACACACATATATACACATATATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA .........:......x.x....:........:.:....:...x.:x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 131889858 58324697 +3461 chr4 + 190214555 178030741 178030740 178030827 87 CACACATATATACACATATATATACACACATATATATACACATATACACACACACACATATATATAGTATACATATATACATATACG chr4 + 94230402 23247721 23247720 23247807 23247721 23247720 23247807 87 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATG ..::::.:...:....:.:..x..::x......:..:.......:.........x:x.x.x.x:.x::..:x...x...:.....:. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 154783020 35431535 +3175 chr4 + 190214555 178030754 178030753 178030846 93 ACATATATATACACACATATATATACACATATACACACACACACATATATATAGTATA--CATATATACATATACGTATACATATATACATACAC chr4 + 94230402 6244962 6244961 6245056 6244962 6244961 6245056 95 ACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACAC ....:..x.:..::.:...........x.....:.:....::x.x..:x.::x.x.x.--.x.:.:..x:x:.::.....x.......:.:.... 58M2I35M 61/93 65.6% 95/94230402 0.0% 2/93 2.2% 171785792 18428763 +3110 chr4 + 190214555 178030780 178030779 178030828 49 ACATATACACACACACACATATATATAGTATACATATATACATATACGT chr4 + 94230402 52037412 52037411 52037460 52037412 52037411 52037460 49 ACGTATACACACACACACACATATATGTAATACATATGGACAGATATGT ..:................:......:xx........:x...x...:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 125993368 64221187 +3090 chr4 + 190214555 178030804 178030803 178030900 97 ATAGTATACATATATACATATACGTATACATATATACATACACGTATACATATATACATACACGTATACGTATATACATACACGTATATATATACAT chr4 + 94230402 7596583 7596582 7596679 7596583 7596582 7596679 97 ATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACAT ...:.:.:x.xx....xx.x.::x.....x....x...:....:.::...x..x:.:...:..:..x..::.x.x..x.x..x...:....x:.... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 170434221 19780334 +3430 chr4 + 190214555 178049925 178049924 178050024 100 GGCATATATATATATATATATGTGTATATATATATATATATATATATATATGTGTATATATATATATATATATATATATACATTGTTACATCCTCTTGCT chr4 + 94230402 46063287 46063286 46063385 46063287 46063286 46063385 99 GGCACATTTAC-CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAATACTATCTTGCT ....:..x..:-:...:..:...::..:.:...:x::.:..:.x:..:.....x......:......:xxx.......:.x:x..:x.:.::x....... 11M1D88M 64/99 64.6% 99/94230402 0.0% 1/99 1.0% 131986638 58227917 +3069 chr4 + 190214555 178049968 178049967 178050015 48 ATATATATGTGTATATATATATATATATATATATATACATTGTTACAT chr4 + 94230402 23402830 23402829 23402877 23402830 23402829 23402877 48 ATATGTATGCGAATATATATATGATCATATATATATACATTTTTACAT ....:....:.x..........:xx:...............x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 154647138 35567417 +3487 chr4 + 190214555 178097973 178097972 178098106 134 AAAATTCTAAGAAATGCAAACCATATTGGCAGAAAAACAGTTGTGTTTTTTGTTTGTTTGTTTGTTTTTTGCCTGGGGATGGTAGAGAT---GGACTGAGAAGTGTG--AGAGAGATT--------------------AAAAGGATCACAAGAAAACAT chr4 + 94230402 13945404 13945403 13945553 13945404 13945403 13945553 150 AAAGTTCAGTAAAAAGCAA-------TGGCAAAAATCTAATGATTTTTTTTGTTTGTTTGTTTGTTTTTTACCAAAGG--GGGAGAGATCTATAACTATAAATTGGGACAGAGAGATTTCCCCAAACTGACCCCTTCCAGAAGAACAGCAAGAGAACAT ...:...x:x:...x....-------.....:...xx:.:.x:.x.........................:..x::..--..x......---x:...:x:..x..x.--.........--------------------.:...:.:x:.....:..... 19M7D52M2D9M3I15M2I9M20I21M 93/125 74.4% 150/94230402 0.0% 34/125 27.2% 164152569 26061986 +3513 chr4 + 190214555 178102396 178102395 178102469 74 GTGCACCTGTGGTTTCAGCTACTTGGGAGGTTGAGGCAAGAGGATCGCTTGAGTCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x...:...:..........::...:....x.xx.x.:.x.:.....::....:..x.xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 102069192 88145363 +3033 chr4 + 190214555 178102700 178102699 178102756 57 TTTTCTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTTTG chr4 + 94230402 10558406 10558405 10558462 10558406 10558405 10558462 57 TTGTTTTTTTTTCCTTTTCCTTATTTTTTTCTTGTCTTGACACAAAGCAGCGTTTTG ..x.:........:....:...x.......:..x.:....x...:..:xx..:.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 167544294 22670261 +3031 chr4 + 190214555 178103381 178103380 178103443 63 TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGGAAATGGATTCTCGCTCTATCACCCAGGCTA chr4 + 94230402 56901407 56901406 56901469 56901407 56901406 56901469 63 TTTCTCTCTCCTTGCTTTCTTTTCTCGTTTTGGAAATGAAACCTTATTTTATAACCTAAGCCA ...:...:..:..x:...:....:.:x...........:.x:..:::.:...x...:.:..:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 121201974 69012581 +3415 chr4 + 190214555 178104756 178104755 178104827 72 TATATATACACACACATAAGTACATATATATATGCACATATGTATACATGTATACATACATACATATATACA chr4 + 94230402 41749096 41749095 41749167 41749096 41749095 41749167 72 TATATAAACACACATATAAGTTTATATCAGTATGTGCGTATGTATACATACATGTACGCTTATATCCATGTA ......x.......:......x:....xx:....::.:...........::..::.::.x..:..x:..::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 136355660 53858895 +3208 chr4 + 190214555 178104821 178104820 178104921 101 ATATACACATATTTCTGTGTGTGTGTGTATATATAT----------------------------ATATATATATATACACACTATACAC---------ACACACACACACATACCACAT-TTTAAAAATCCATTTATCC chr4 + 94230402 27702302 27702301 27702440 27702302 27702301 27702440 139 ATATACATATATTCCCAAGTGTGTGTGTATATATATATATATTCCTAGAAATTGATCTTAAGTAatatatatatatatataatatatactgatataatatatatatacagatataatatatataATGATGCATATTTTC .......:.....:.::x..................----------------------------.............:.:.x....:..---------.:.:.:.:...x...:x.:..-.x...x:..x...x.x.:. 36M28I25M9I21M1I19M 77/101 76.2% 139/94230402 0.0% 38/101 37.6% 150402519 39812036 +4316 chr4 + 190214555 178116779 178116778 178116853 75 AGCACATTTATCGTGCAATGGATAAACCTCACCCTGGGAAAACCACCTTCCTGATCACGGTATCTCCCCTGCCAG chr4 + 94230402 64119777 64119776 64119851 64119777 64119776 64119851 75 AGCACACCTGGAGTGTAGGAGATGAGCCTCCTGCTGTGAAAACCACCTGCCTAATCACGGTGTCTCCCCTGCCAG ......::.:xx...:.:x:...:.:....x:x...x...........x...:........:............. 75M 57/75 76.0% 75/94230402 0.0% 0/75 0.0% 113997002 76217553 +3132 chr4 + 190214555 178119841 178119840 178119923 83 ATATATATATATATGTGTATATATATATGTATATATATATATGTGTATATATATATGTATATATATATATGTGTATATATATA chr4 + 94230402 89812969 89812968 89813051 89812969 89812968 89813051 83 ATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATA .....x...x............x..x...:x.xx...:..:..::x.:x:x:..::....:.x:x.:.:.....:.:...... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 88306872 NA +3171 chr4 + 190214555 178127445 178127444 178127482 38 CACTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601302 12601301 12601339 12601302 12601301 12601339 38 CGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA .:...................x.....:.......... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 165526143 24688412 +3168 chr4 + 190214555 178127446 178127445 178127488 43 ACTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248046 75248045 75248088 75248046 75248045 75248088 43 ATCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::..::...............x.x.................. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 102879400 87335155 +3393 chr4 + 190214555 178127446 178127445 178127484 39 ACTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601301 12601300 12601339 12601301 12601300 12601339 39 ACGCTCTCTCTCTCTCTCTCTCACACACGCACACACACA ..x.........................:.......... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 165526145 24688410 +3224 chr4 + 190214555 178127447 178127446 178127482 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248053 75248052 75248088 75248053 75248052 75248088 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACa ...................x................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 102879394 87335161 +3102 chr4 + 190214555 178127451 178127450 178127486 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 165526147 24688408 +3146 chr4 + 190214555 178157155 178157154 178157205 51 AAAACAAAACAAAACAAAACAAAACAATAACAACAAAAAAAGACCCACAAC chr4 + 94230402 18496617 18496616 18496666 18496617 18496616 18496666 50 AAAAAAAAACCAAA-AAAACCAAACAACAACAACAAAAAAAAACCCACCAC ....x.....x...-.....x......:.............:......x.. 14M1D36M 44/50 88.0% 50/94230402 0.0% 1/50 2.0% 159660538 30554017 +3095 chr4 + 190214555 178157162 178157161 178157197 36 AACAAAACAAAACAAAACAATAACAACAAAAAAAGA chr4 + 94230402 80206928 80206927 80206963 80206928 80206927 80206963 36 AGCAAAACAAAACAAAACAACAACAACAAAAAAAGA .:..................:............... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 97950234 92264321 +3278 chr4 + 190214555 178165226 178165225 178165291 66 AAAATATCCAAACACTATATTCATATAAATAAATATGCACACACACACACTCACAAAAATAGTTGA chr4 + 94230402 74671057 74671056 74671122 74671057 74671056 74671122 66 AGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAA .:.....x....x.:..xx.x:.....x...x....:.............xx.x........:.:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 103494169 86720386 +3052 chr4 + 190214555 178189065 178189064 178189164 100 TGCATATATGTGTGTTTGTATATTTGTATGTGTGTATATATATGTATGTGTGTGTATGTGTATATATATGTATCTATATATATAAAGTAGGAATCCTGAA chr4 + 94230402 70094142 70094141 70094232 70094142 70094141 70094232 91 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT---------TCTAGAAAAAACAAACCCTAAA ..:.x..............x.:.........:.:.:......x::.xx.x::.:x..:.:...::.:..---------.x..x...:x.x:..:...:.. 69M9D22M 61/91 67.0% 91/94230402 0.0% 9/91 9.9% 108094923 82119632 +6510 chr4 + 190214555 178214751 178214750 178214909 159 TCAATTTGTTATA--TTTTTTAACCTTTACAACAATTACATTGTTCTTGATGACTAAGATCATTAGTCTAATAACTATAATTAGTTATAATTATGCAAAATGGGAGTGTAATTTAATG---TGCTATTT-ACTGTTCTCAAAAGATCTCGTTAAT--AGTGTTTATG chr4 + 94230402 43294341 43294340 43294503 43294341 43294340 43294503 163 TCCATTTGTCATAGGCCTCTTAACCTTTATAACA----CATTGTGCATGAGGATTAAGACCATTAGTCTAATAACTACAATTAGTCATAATTATCCTAACAGGGGATATTAGTTAATGAAATCTCATTTCAATGTTCGTAATAGATTTAATTAATACAATATTTATG ..x......:...--::.:..........:....----......x.x...x..:.....:.................:.......:........x.x..xx...::.:.x.x......---.x::....-.x.....x:..x....:.x:.....--.:.:...... 13M2I19M4D80M3I8M1I25M2I10M 121/155 78.1% 163/94230402 0.0% 12/155 7.7% 134920410 55294145 +3187 chr4 + 190214555 178217870 178217869 178217952 83 CGTGGTGGTGCACACCTGTAGTCCCAGCTACTGGGGAGGCTGAAGCAGGAGAATCACTTGAAACTGGTAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:.........x.::.......:x.xx.x...x........x.::.x..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 102184673 88029882 +3078 chr4 + 190214555 178242494 178242493 178242557 64 CTCTTTGTCTTCCTCACCCTCCACTTTTCTGTGTACCTCATTCTGCCTGGACACAGGACAAGAA chr4 + 94230402 30305741 30305740 30305804 30305741 30305740 30305804 64 CCCTGTGACCCCATGACACTCCCATTTTCTGTGTACCTCAGTCTCCCTGGATACAAAAAAAAAA .:..x..x.::.x.x..x....xx................x...x......:...::.x..:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 147936753 42277802 +3048 chr4 + 190214555 178243206 178243205 178243274 69 AGTCCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTT chr4 + 94230402 79265511 79265510 79265579 79265511 79265510 79265579 69 AGTCAACAGTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATT ....x.::.............::........xx...:.:.:::.::::.....:::::.::x....:.. 69M 44/69 63.8% 69/94230402 0.0% 0/69 0.0% 98977695 91236860 +3031 chr4 + 190214555 178243652 178243651 178243697 46 GCAAAAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAGAA chr4 + 94230402 88382708 88382707 88382753 88382708 88382707 88382753 46 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAA .....:.........xx.x.........::.:...........:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 89860944 NA +3940 chr4 + 190214555 178263691 178263690 178263799 109 GTGAAGGTGT---------TATATATATGTGTGTGCGCATACATATGCGCGCATATGTATGCATATATGTATGCACATATATGTGCGCATACGTATGTGT--ATGTACATATATGCATAT chr4 + 94230402 5214204 5214203 5214321 5214204 5214203 5214321 118 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACG--TGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x......---------:.:::..x:...........x:::.x...:.:..:..x..:.--.:....:..x::...:.:........x....:.....--...:.x..:.:....:.. 10M9I42M2D37M2I18M 76/107 71.0% 118/94230402 0.0% 13/107 12.1% 173049487 17165068 +3943 chr4 + 190214555 178263747 178263746 178263854 108 TATGTATGCACATATATGTGCGCATACGTATGTGTATGTACATATATGCATATACGTATGTGTACGTACATAGATGCATATACATATGTGTACGTACATATATGCATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ...::...::::.x.x....x..:..:x...:....:x:.......:x.:.:...x...::...:....x:.x::x:x.:.::.........:.x.:..::.....:. 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 157154553 33060002 +3513 chr4 + 190214555 178271773 178271772 178271852 80 CTGTTTTTTTGTTTGTTTGTTTGTTTTTTCTTTTCTCCACCCTGTCGACAG----TTAACATAGCCCTGCACTTCAAGCTGTTT chr4 + 94230402 18401563 18401562 18401643 18401563 18401562 18401643 81 CTGTATTTGTTGTTGTTTGTTTGTTTTTTCTTCCCTCCACACTGTTTACAGATTATTAATACAAA---GCACCTTGGGCTGTTT ....x...x.xx....................::......x....:x....----....:.:.:x---....:.:::....... 51M4I10M3D16M 60/77 77.9% 81/94230402 0.0% 7/77 9.1% 159870210 30344345 +3020 chr4 + 190214555 178276481 178276480 178276560 80 TTATTTCTATGTATTTAAAAATGCAAAATAGTTTTAAAAAAACTAATTACCAAATGCTTGAAATTAAAAAAGAAAAAAGA chr4 + 94230402 28854640 28854639 28854719 28854640 28854639 28854719 80 TTATTTGTATCTATTTAATGCTGAAACATAATTCTAAAACAACTAACTAACACTTGTTTTCAAGTAAGCAAAATCAAGGA ......x...x.......x:x..x..x...:..:.....x......:..x..xx..:..xx..x...:x..:.xx..:.. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 149421841 40792714 +3194 chr4 + 190214555 178299039 178299038 178299121 83 CATGGTGGCATGAGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTGGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....--..x:.x......:...........::.:......x.xx.x...x.:..x......:.:..x:xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 102265842 87948713 +6604 chr4 + 190214555 178311026 178311025 178311357 332 TTTATTAGTGGTAGTAGTG-----TTATGAAGGATGTTAATATTC---ACAAAAAACAAGTAATAGTAATTTAATATATGTGGTTTCACAGTACAAAGAATATTAAAATTCTTGGTAGTGATTTAAGTATAGTTCTGCCTAATGATATTAGAAAACTTCTTAATTCTTCCTACATCATGAGATGGGCTTTGTAGTCTAATGCATTTTTAATAAGAGAACAGTGCATTCATCTATG-GCCCATTCCTTTATGCTTAAAAGAAGATGGCAATGGTTATATGCCATTAATTTAAGTATTTATCAATGGAGTGAATGTAATTTCCCTAAAGTATTACTTATTTAC chr4 + 94230402 43304311 43304310 43304639 43304311 43304310 43304639 329 TTTATTTGTTGTGGTTTTGACTCataatataaaatgttaatattttcaataaaaaataaGTGGAAAATGTTTCTTGTATTTAATTTAGCATTTCAGATTGTGTTGCAACTGCTGATACTATTTGAAATTGACTTTCAGATAATGACATTAGAAAACTACTTAATTCTGATTACAAAATGAGA--GACTTCACAGTCTAATGAATTTTTAATAAAGCTCCTGTGTATCATTGTATGAGCTTGCTCCTTAACGCATGG--------GATAGAGATAACATTCCATTTGTTTC--CCTGTGTCAGGGAAATGATAATAAATCATCTGAATATTTACATTCTCAC ......x..x..:..xx..-----.x..:x.::...........:---.:......:....::x.:xx:...xx.:...x.::...x:..x.x..:.xx:.:..:x..:.x:..:..x.:x..x..:.xx.x..:::xx......:...........x.........xx:....xx......--.:...:::.........x...........::xxx.x...:..:xx.x....-..::::.....x.:..x.::--------.::.:x.:.x.:..x.....x:...x--:x.x.:...:x.:.:...xx:...x.:x:..:..xxx....x.x:.:.. 19M5I21M3I134M2D51M1I20M8D26M2D49M 200/320 62.5% 329/94230402 0.0% 21/320 6.6% 135006715 55207840 +6893 chr4 + 190214555 178331255 178331254 178331584 330 TACGCAGAGAGCTTAGTGGAAATAGATGGTGAGCACTTAAAGGACCATTTC--TCCTTCTGTTAGTGTAATAGCATTGTTACTGAATACAGAAAGAGGATCTTA-AATTGACCTCTAGTTTTTATTTGTATTTATAAAATAAAAGCTTAAATCTATCACACTGCTAAATAACTGCTTTTCAAAACC------------GGAGAC-------AGC-ACTTTACATTTTATTCATTTCACACCAACTGAATATGATAATACCTCTCATTATTTGAGGTTAAGAGAGCTTGAACATTCCCAAGAGGTTGTAATTCAAATGTAGGAGCCTGACTTTAAATGGTA--TTTACATATAGTA chr4 + 94230402 43316863 43316862 43317215 43316863 43316862 43317215 353 TATGTAAAACACTAACCAGAAGTGGCCAGTACAATCTTAAA--ATCTTTCCCATCTTTTTGCTAGTCTTACGTTATTGTCAGTGTTGTAAAACAGATGATTTTTTGAGAGACCCTGAAAATATTTGGGTATTTAGAGAACTTAAGCTGATATGTTTCCCAGTAGAAAATGAATAGTTCTTAGAATCCTGTCTTCAGGCAAGGACCTTTCAAAGCTGTTTTGCATTTTACTCATTTCACACCAACTGCATCTGATAATCTTTTCTATTATTTGGGGTTAGGAGTGCTTGAATACTCCTGTGAGTTTAGAATTCAGATGTGCATGCATGAGTGTGGGTACAAAGTTTGCATACAATA ..:.:.:.:x:..x.x::...:.:.x::..:x:xx......--.:.x..:.--..:..:..:....x.x.::x:.....:.x..xxxxx.:.x...x...:..x-:.xx....::x.:xx.x.x.xx.......x.:..:xx.....x.x..x.x..x..x.:xx....:.x.:x..:.:.:..:.------------:::...-------...-::...:.......:.................x..x.......x::.:::........:.....:...x.......:.:...::x...x..:x......:....:x:x..x...x.x.:::.:xx.--...:....:.:.. 41M2D8M2I51M1I81M12I6M7I3M1I125M2I13M 206/328 62.8% 353/94230402 0.0% 27/328 8.2% 135014392 55200163 +12362 chr4 + 190214555 178337732 178337731 178338303 572 AAAAATGGAAATTTCAAAATAAA--------GGAAGAAAAAACACACAGTGTGTTGCTTTTT-ACACTAACAATTTTACA--CTTAATTTTCAAAAATATTTCTTCCAGCAATACTTTG----TCCTTGAGAATATTAAGGTAC-GCCCACCCAGCTCTTTTTTAAGAAATACATGATACAAACAAAAGGCAAACAAACGAACACCAGAAAATTTGCACGATTCAATGAAAACATGTTTATTCATTCACTGTTTATTCATTTTACTCTCCTGTTCTAGAGGAGACAAGTGGTTTGTTTCTTTCCCTGGAGAAA-CTCTTGGTATGAGCTTTGAAATGTCAAGTATAATTAAGACAAAGTGTAC-TTTTTAGCTCGACAAAAGAAATGTATCTTTCAAAATAACTGTCTCTTGAAGGT----AGAAAACACAGTCTATCTCAGTTGAAACAGCTCATTGTGTTAAATCACTTGTCAACTTCAGCATGGCTCC--ACTGTGGTA---TATAATTTAGCTGAGTGTCCCATCATTGC---CCAGCATGGATGGTACTACCAATGGGTACTATCACAGCACATTTATGAAGTTCTGAGTATTAAAA chr4 + 94230402 43318544 43318543 43319086 43318544 43318543 43319086 543 AAAAACTTAGCTCTCAGAATGAACATACCAGGCAACCAAGTACATACCAAATATTGCTTTTTTAGACCAGCTTTTTTCCTTTCTTAATTGTCCACAATATTTCACCTATCAATATCCTGAATTTCCTCAGAGATAAAAAGAAACCATCTAGACAGCATCCTCCC------CCCACAGTAAAAATAGTAACCACACTA--TACCATTAGAGAA-------------ACCAGAGCCT--------------TATTTATTCATTTCACACTTGTTTTCTGGAGGAGAC---TGGTTTGTTTCTGTCCCTGGAGGAAGCGCCTGGTATGAGGTTTGAAACGTCAGGGATAATTAAGACAAACTGTGCTTTTTTACCCCAACAAAAGAAATATATCTCTTAAAATAACTCCCCACTGAAATCTCTGAACAAAAACAGCCCAGTACTGTTGAGTTAGCTTGCAATGCTAAATCAATTGTCAGCATTAGTAAGGCTCTGAACTGGAGCATCTTACAGTTT--------------TCATTGCAATCCAGCAGCTACTGTGCTACCAGCAGGTACAACTACAG-------ATAGAATGCTGAATAGTCAGA .....:xx.:x.:...:...:..--------.x..xx..:x...:..x:x:.:.........-.x..:.:.xx....x.x--.......x..x.x........x:.:.x.....:::..----....:::::...xx...:x..-::.:.xx....x:::.:::------:x..:::..x...:.:x.:x..x..x.--x.x..::...:..-------------.:x.:.:.x.--------------.:...........:..x..:x.x....:........---............x.........:..-.x.:.........x.......:....:.x..............x...:.-......x.:.:...........:.....:.:.........x:.:x:....:x:----.:x...x....:.:.x:x.x.....:x:....:::x:..:.......x......:.x.:..:.x.....:--....x:.:.---..:.:...--------------.......---......xxx.:x..:......:::.....x.::....-------..::.:.x....:..x.x.:. 23M8I31M1I17M2I37M4I21M1I19M6D27M2D13M13D10M14D36M3D25M1I49M1I53M4I70M2I9M3I8M14D7M3I37M7D21M 352/513 68.6% 543/94230402 0.0% 89/513 17.3% 135019188 55195367 +13617 chr4 + 190214555 178351689 178351688 178352057 369 CACACACAATCAAGATTATAGACCTACTGAGCAGATGGCCTTTGGCTTGC-AGAAAATTGGAC-CTGGGATAACTTTCTGAATTTATTTTAGACTCAAATAGTCTTTAGTATGCACAAATCATTAAAGCATAAGTCTGGACCTG-----TAGAGGGTTTCTTTCAATATTTTATAGGAAGGATTTTGATCTATGATTTATCAGTCAACTGACAGCACTAAGGGGAG----------AGAGGTTTTTTTTTTTCCCATTAAGAATCAATT---CTTCTGGTAGA-----TTTTTATCTTCATTTTCATTCCACCCATTGAAAAAAATCTGCTTTGCCATATGCCTGTCAATTTGAGTGACCAGGTACATAAGTTGTATAAAATGTAGGAATTTTT chr4 + 94230402 43324016 43324015 43324399 43324016 43324015 43324399 384 CAGAAAAAACTAAGATTCAAGTTATA-TAAGCAGATGGGTATAAAATTAAGATGAAATCAGACACCAGTACAGCATTCAGAATTTGTTT-GGATTCAAATGGTCTTTAGTATGCGCAAATCATTAAAGTGCCAATCTATGCCTGAGGTGTATAAGGCTTGCTTCAATATTTTATAGGAGAGATTTTGATCTATGATTTATCAGTCAACAGACAGCACTAAGGGCAGatttttttttattatttttttttttatatatttGGAATCAATTACCCTCCTGGTACATAGATTTTCTACCTCCATTTCTG------CCATTGAAAAAGA--AAGTTTGGTACACGCCTGTCAAGTTGAGTGACCAGCAGTACAACTAATATAAAATGCAGGTTTTCTT ..x.x.x..::......xx..x:x..-.:.........x:x.x::x..:x-.x:....::...-.::.x.:.:.x...x......:...-:..:......:.............:.............:::x.:...:x:....-----..x.:..:..x:.................::............................x..............x..----------.xx:x..........x:x:...x:.........---..:......x.-----...:..:..:.....:::------...........:.--x:x....x:.:.:.........x............xx::.:..x.x:.........:...xx..:.. 26M1D23M1I12M1I25M1D54M5I77M10I33M3I11M5I18M6D13M2D67M 267/359 74.4% 384/94230402 0.0% 35/359 9.7% 135027673 55186882 +3128 chr4 + 190214555 178355312 178355311 178355359 48 AACCACTGTGCCCAATTTTTCTTTTCTTTTCCTTTCTTTTTTTTTTTT chr4 + 94230402 81088311 81088310 81088358 81088311 81088310 81088358 48 AACTATTGTGTTCAATTTTCTGTTCCTTTTTCTTTCTTTTTTTTTTCT ...:.:....::.......::x..:.....:...............:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 97267001 92947554 +3475 chr4 + 190214555 178363360 178363359 178363442 83 CATGGTGGTGAACGTCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAATCCAGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x....--...:.:.:.......::::........x.xx.x...x.:......:.......x:xx:..:..:.. 15M2D66M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 102330163 87884392 +3740 chr4 + 190214555 178366188 178366187 178366261 74 TGTATGTGTGTATATATATGTGTGTGTGTATATATATATATACACACACACATATATAAATGTATCACACATAT chr4 + 94230402 44815600 44815599 44815672 44815600 44815599 44815672 73 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA-ATATAAATTAACTAAACATGT .:.:......:...:.....x:...........x.:.x..:...:.......-........xx.::.x....:. 52M1D21M 56/73 76.7% 73/94230402 0.0% 1/73 1.4% 133550588 56663967 +3470 chr4 + 190214555 178379877 178379876 178379953 77 GACTATTGAAAGAAAAAC---AGACAAGCAGAAAGTGACAACAATAGCATCAACAACAACAACAACAAAAAAGGCCCCCC chr4 + 94230402 42575000 42574999 42575079 42575000 42574999 42575079 80 GACTAATGACATGAAAATGCAAAACAAAAAAAAACCACCACCACCACCACCAACAACAACAACAACAAAAAAAGCCCCTC .....x...x.x:....:---.:....:x.:...x::x..x..x:.x..:......................:.....:. 18M3I59M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 135804877 54409678 +3050 chr4 + 190214555 178381663 178381662 178381726 64 TCAAAAAACAA--------CAACAACAGCAACAAAAAACCCAACAAAGATCAAAGAAGAGCATTACATAATG chr4 + 94230402 24160874 24160873 24160945 24160874 24160873 24160945 72 TCAAAAAAGAGATTTTCTCCAAAAACAACAACAAAAAACCCAAGAACTAAAAAATGAGTGCATTACATAATG ........x.:--------...x....:...............x..xx.xx...x:..x............. 11M8I53M 52/64 81.2% 72/94230402 0.0% 8/64 12.5% 154220789 35993766 +4090 chr4 + 190214555 178406724 178406723 178406801 78 TGATCTTTTCTGATCTCAGAAGCTAAGCAGGATTGGGCCTGGTTAGTACTTGTATGAGAGAGTGCCTAAAAATAACAC chr4 + 94230402 2289836 2289835 2289912 2289836 2289835 2289912 77 TGACCTTCTCAGATCTCATAAGCTAATCAGGATTGGGCCAGGTCAGTGCTTGGATGGGA-AGCATTCAAGGAAAACAC ...:...:..x.......x.......x............x...:...:....x...:..-..:::::..::.x..... 59M1D18M 59/77 76.6% 77/94230402 0.0% 1/77 1.3% 176116888 14097667 +3071 chr4 + 190214555 178416857 178416856 178416895 39 GTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTGTATGT chr4 + 94230402 28559411 28559410 28559449 28559411 28559410 28559449 39 GTTTTTTGTTTGTTTGTTTTTTGTTTTTTTCTGGAATGT ..............................:.x.x.... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 149857446 40357109 +8363 chr4 + 190214555 178417719 178417718 178418022 304 TTAAAAAATTTAAAATATATAAGGAATATAATCACTTCTCAGTTCTTTAAAACTTAGTATAAGATTTTCTTAATGCCAAGACAGTTAATGAAT---------------TTTTGGACAGATTGATTAAAGAAATGGCATTACCAACCAAAATTGCCCTTTTAATGATAAATTCCTTCAGCTTTGAATTATACGTTATGTTCCATAATTCTGATGATCTTAA---------GGAGACATTCATTTTAAACTTAATTATTTGATAAGATTAGAAATAAAATATTAATATGCATCTCCAAGATACTTCTTTTTTATTATCTATTAAAAATGT chr4 + 94230402 43259754 43259753 43260071 43259754 43259753 43260071 318 TTTAAATTTTTAAAATCCTGAATCAATGTACTTACTATGTGACCTATCAAAACCTGCCATTTT-TTCTCCCACTGATTAGAGAGTTACTCAATAGCTATAATCTTCTATTTTAA-------GATTGAAGAGAATGTAAGACTAATCGAA-TTGCC-TTTTAATGATATATATCTTAAACATCAAATTATGCTTTGCTTTCCATAAATCTCAAGATTTTAACTTAAAATGTAAGGCATTCCTTCTTAACTTAATTATTTGATAAGATTAGAAGTAAATTATTAATCTGAATCTCCAAGAAATCTCTATGCCTTCACATATTAAGAATAT ..x...xx........x:xx..xx...:..x.:...x:x::::::x.:.....:.:x:..xxx-..:..::.x..x:x...x.....x.x...---------------....::-------....:....:.xx.:.xx..:..:.:..-.....-...........x..x:...x.:.x.::......:.x..::x........x...x.x...:....---------x:..:.....x..:.x..........................:....x.......x..x..........x.::...x.x::x.:.:x......:...:. 63M1D29M15I6M7D28M1D5M1D64M9I99M 202/294 68.7% 318/94230402 0.0% 34/294 11.6% 135157965 55056590 +3432 chr4 + 190214555 178420781 178420780 178420878 98 CATGGTGGCACATGCCTGTAATCCCAGCTACTCGAGAGGCTGTGACAGGAGAATTGCTTGAACCTGGAAGACGGAGGCTGCAG----TGA-GCCAAGAACATG chr4 + 94230402 76033197 76033196 76033297 76033197 76033196 76033297 101 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG ..::....::..:.--....:.:.........:..:......x.x.xx.x...x::........::....x:xx:.....:..----...-......x.x... 14M2D67M4I3M1I12M 69/96 71.9% 101/94230402 0.0% 7/96 7.3% 102387584 87826971 +3120 chr4 + 190214555 178438648 178438647 178438711 64 TTTTTCTTTTCTTTTTTTCTTTTCTTTTTTCTTTTTTTTTTTGAGATGGAGTCTCACTTTGTAG chr4 + 94230402 61949746 61949745 61949809 61949746 61949745 61949809 64 TTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTGAAG ..x......:.xx.x:...........:..::..........xx::....x.:.:......x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 116488902 73725653 +39148 chr4 + 190214555 178448237 178448236 178449051 815 TTTGGAATAAGTGAGATACGAAAGAGAGGATTGGCAAATTGGCTATTACCATACTTTCACTAAAGCATGAGAACATTTCCCATAAGAAATTGACATATT----TACTTAAAATTATTCTAAACATTCCATATCCAGTATTTTAGGCATTATTGAAAATGGTTGTCACTGGAAATATAAAAGGCCTTTTCATG-ATTCTGTGTTGTCTTATTGTCTGAATATGTGACTCTCCACATTGACACCAAATTGCTCTCCTGTCAACATGTAAAAGGATGGATCATTTTATCTTCTGAGCGATGAAGTTTCAAATCCACAAAGCACAGGCTGTCAGTCCTTTGAGGTGATTATGATGCCTCAAACCTGACAGCTTGCCCTGACAGCTTTCACATATTCCTGAAATCAAATTGTTCCTGCTTCTATTAGAAGAAGGCAGGTGTGTGAAAACTAGAGGAAGAAGAAGGTAAATA-GAAAATAAAATGATCTTCATGTGCAGAGTAATTATAAAAAGCTGTTTCCAGGGAAAAGTGTAGATATTGATTTTACCTCTCTTCCTGATGTTCACGGATGAGACCACAAAGAACCCATATGGGTTCAAGGTTTGCCAGGAAAGAAATATCAAGATAAGCAGATGGCAGTGCCATTGCCATATGGCTGCTTAGGAATGGACCTATGTGATGGCATTTTGCCATAAGACAAAGCTAGAAATATTTTCCTGATACTATTTTAAACAGCACAAAAAAAGAATATGTGTTTGTTGACATTAAAAATCATTAGAAAATTATGACAGA-AAT-ACTTTATTATATTCAACTCCACAAACTGGC chr4 + 94230402 43224896 43224895 43225717 43224896 43224895 43225717 822 TTTCACATGAAGAGGAAATTAAAGAGCAGATTGCTAAATGGGATATAAACATGATTTCATTCAGGCTTGATCACACCTCAGGCTGAAAGCCGACACTTTCCCTTACTTAAAATTATTCTAAACAGTGTGTGTCAAATATTTTAGACATTATTGAAAATGGCTGTCACAGAATATGTGAAAGGACCCTGCATATATTCGGTGTGGCCTTATTGTCTGAATGCGTGAATCGCTACGCTGACACAAAATTGCTACCCTGTCAGCATGTAAAAGGACGGATCATTTCATCTCTTTAGTGGTGAAGTTTCAAATCCACAAAGCACAAGCCGTCAGTCCTTTGAGATGATTATGATGCCTCGAACCTGACAGCTTGCAATGACAGCTTTCACAAATTCTGGAAATCAAATTGTTCCTGCATCTAACAGGAGAAGGCAGGTGTGCACAAAACAGAAATGGATGAGGCTAAACATGAGAATAGCGTGATCTTTATTTTCAGTGTAATAGTTAAAAGTTA-TACCAGGGAAAATTACAGATTTCGATTTTGAACCTCTTCATGATATACACATATGAGGGCACCAATAACCCATATGGGTGCAAGGTTTGCCAGGAAAGGAATATCAAGATAAACAGATGGCTGTACCACTGCCATATGGCTCCTCAGAAATTGGATGATGCTATGGCATTTTGCCACAAGATAGATGTAGTGTTATTTTTGTGCCAATATTTTAAGCAAAGCAAGGAAGAAATACATAACTATCTGCAATTAGCTGTGTTATGTAAATATAAAAAATAATAACTGTTTTATGGGAAATTTTGTAGACTGAC ...x:x..:.:x::..x.:x......x:.....x:....x..x...x.x...:x.....:.x.:..x...xx...::..xx::x::..:::....:x..----.....................x.x::.:..x.:........:...............:......x.:.x..:.:.....x.::.x...:-....x....x.:..............::....x..x.:..::......x........x:.......:............:.........:....::.x..:.:.........................:..:..............:...............:...............xx..............x....:x...................x....x:..:..............::x...x:...::x:..x..:.x....:.-..:....:x:.......:..x.x...x.....x:.x.....:.:-.x..........x.::....x.:......:xx:......x....:.x...:x.....:x...x..x.............x..................:.............:........x..:...:............x..:..:...x.:x:x...:x..............:....:.:.xx...x:x......:x..x:.x........:..:x:...::..::....::.:x:.:.:x:..x.x.:xxx::...x:x..x...:.x.:.-...-...x.x....:xxx..:.::::.:....:. 99M4I89M1I273M1I44M1D276M1I3M1I30M 601/814 73.8% 822/94230402 0.0% 9/814 1.1% 135223341 54991214 +3133 chr4 + 190214555 178462274 178462273 178462349 76 TGTATGTATCTTCATTTATACCTACCTATCTATCCATCTATTTATCTGTCTGTCTCTCTGTCTATTATCTGTCTAT chr4 + 94230402 37955234 37955233 37955309 37955234 37955233 37955309 76 TGTTTGCTTCTTTGTACACGTCCACCTGTCTACCCATCTCTTTCTCTGTCTACCTACATATCTATTCTGTTTTTAT ...x..:x....::.x:.:::.:....:....:......x...x.......::..x:x.:......x.x.x.:... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 140507040 49707515 +3054 chr4 + 190214555 178464794 178464793 178464848 55 TGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCACACAC----ACACACACACACATAT chr4 + 94230402 79265520 79265519 79265578 79265520 79265519 79265578 59 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATAT ............::........xx...::..:..:....----:.....:..x...... 39M4I16M 44/55 80.0% 59/94230402 0.0% 4/55 7.3% 99199274 91015281 +3089 chr4 + 190214555 178464799 178464798 178464862 64 GTGTGTGTGTGTGTGTGTGTGTGCATGCACACACACACACACACACATATGGAGAGAGATTTAT chr4 + 94230402 79265519 79265518 79265582 79265519 79265518 79265582 64 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGT .............::........xx..:.:.:...:....:::::..:.:.x.:.x.x....:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 99199280 91015275 +3023 chr4 + 190214555 178473127 178473126 178473181 55 AAAAACAAACAAACAAAAAAAACCCATATATTTTTGGTTTGTTTGTTTTAGAGAG chr4 + 94230402 45330857 45330856 45330911 45330857 45330856 45330911 55 AAAAACAAACAAACAAAAAAACCCCCTGAATATCTAGCATTTTTGTACTAGAGAG .....................x...x.:x..x.:.:.:x.x.....x:....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 133142270 57072285 +3333 chr4 + 190214555 178487977 178487976 178488092 116 GTGCACCTGTAGTAGTCCCAGCTACTCAAGAAGCTGAGGCTAGAGAATCGCTTGAACCCGGGAGGCAGAGACTGCAG----TGAGCCCAA----AATTGTGCC----ACCGCACTCCAGCCTGGTGAC chr4 + 94230402 76033204 76033203 76033328 76033204 76033203 76033328 125 GTGCACGTGTAGT---TCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGAC ......x......---:.........::.:.:......x.:x.x...x.:.........:.:..x:xx:.:...:..----...xx....----.xx......----:..xxx::.....x....... 13M3D61M4I9M4I9M4I21M 81/113 71.7% 125/94230402 0.0% 15/113 13.3% 102454773 87759782 +3121 chr4 + 190214555 178507391 178507390 178507508 118 CAGGAAGAAACTGCCAATTCGAATAGACAA-AAAACAAGTGAAGAGATGGAAATAGAATTA--AAAATACTATCCACGCACACACACAAAAAAAAAAAAAAAGAAAAAGAAAAAGGAAAAA chr4 + 94230402 55927795 55927794 55927910 55927795 55927794 55927910 116 caaacaaaaacaaccaact-----aaacaatcaaacacacacacacacaaaaaaaAAACCACAAAAAAATCTCACACACACACACACAAAAAAAAAAAACACAAAAAAAAAAGACCAAAAA ..::x.:....x:....:.-----.:....-x.....x:::x.x.x.:::...x.:..::.--....x.::x:x...:.....................x.x:.....:...:.xx..... 19M5D6M1I30M2I58M 76/113 67.3% 116/94230402 0.0% 8/113 7.1% 122579596 67634959 +3039 chr4 + 190214555 178507444 178507443 178507494 51 AGAATTAAAAATACTATCCACGCACACACACAAAAAAAAAAAAAAAGAAAA chr4 + 94230402 39719023 39719022 39719073 39719023 39719022 39719073 51 AGAAGCATCAATACCACACACACGCACACACAAAAAAAAAAAAAGAAAAAA ....x:.xx.....:.:x...:.:....................:.:.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 138788421 51426134 +3095 chr4 + 190214555 178507462 178507461 178507513 52 CACGCACACACACAAAAAAAAAAAAAAAGAAAAAGAAAAAGGAAAAAAAAGC chr4 + 94230402 55927862 55927861 55927913 55927862 55927861 55927913 52 CACACACACACACACAAAAAAAAAAAACACAAAAAAAAAAGACCAAAAATGC ...:..........x............x:x....:......:xx.....x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 122579600 67634955 +3139 chr4 + 190214555 178507468 178507467 178507515 48 CACACACAAAAAAAAAAAAAAAGAAAAAGAAAAAGGAAAAAAAAGCCC chr4 + 94230402 1761854 1761853 1761901 1761854 1761853 1761901 48 CACCCAGGAAAAAAAAAAAAAGAAAGAAGAAAAAGGCCAAAAAAGCCC ...x..x:.............::..:..........xx.......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 176745614 13468941 +3033 chr4 + 190214555 178525298 178525297 178525349 52 TGTGTATGTACATACACACAAGTGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 + 94230402 6857611 6857610 6857662 6857611 6857610 6857662 52 TATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATA .:.:..:........::.:.::.........x...........x..x.x... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 171667687 18546868 +3868 chr4 + 190214555 178551324 178551323 178551402 79 GTGGTGCACACCTGTAGTCCCAGCTACTTGAGAGGCTGAAGCAGGAGGATCCCTTGAGCCCAAGAATTTCAGGCTACAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--......:............:.......:x.xx.x.:.x.x.....:....::.::..::....::.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 102518123 87696432 +3279 chr4 + 190214555 178558352 178558351 178558434 83 CATGGTGGCACATGCCCGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGACTCGCTTGAACACAGGAGGTGAAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.:--...:.:...........::........x.xx.x..xx.:.......x...:..x.xx:..:..:.. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 102525155 87689400 +3424 chr4 + 190214555 178580739 178580738 178580842 104 TGCTTACTTGCAAATATAAAATAATTAAAAGAAAACATTTAAAA-ATTATTTCTCATTCTGTCGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980251 44980250 44980354 44980251 44980250 44980354 104 TGCCTGCTTGGAAA-ATGCAAACATTTGCAAAGAACATATAAAGGAATGTAGTTCATTTGGCCTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ...:.:....x...-..:x..xx...x:x.:.:.....x....:-.x.:.xx:.....:x.:.x..:.....:..:..::x::.:..........:......... 14M1D29M1I60M 70/103 68.0% 104/94230402 0.0% 2/103 1.9% 133600488 56614067 +3011 chr4 + 190214555 178585127 178585126 178585178 52 TTGTTTTTCTTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTGT chr4 + 94230402 37013834 37013833 37013885 37013834 37013833 37013885 52 TTGATTCTTTTTTTTGTTTGTTTGTTTTGTTTTTGTTTTGTTATACCACTGT ...x..:.:...................xx............x.:::x:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 141571293 48643262 +3050 chr4 + 190214555 178585133 178585132 178585184 52 TTCTTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTGTATTTTT chr4 + 94230402 82689644 82689643 82689695 82689644 82689643 82689695 52 TTTTTTTTTGTTTGTTTATTATTTTTTTGTTTGATTTGGTTTTTGTGGGTTT ..:..............:..x..x........x:...x........:xx... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 95895489 NA +3110 chr4 + 190214555 178585136 178585135 178585185 50 TTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTGTATTTTTA chr4 + 94230402 83377758 83377757 83377807 83377758 83377757 83377807 50 TTTTTCGTTTGCTTGTTTGTCAGTGGTTTTGTTTTGTTTTTGTATTATTA .....:.....:......x.xxx.x.....................x... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 95207378 NA +3042 chr4 + 190214555 178618331 178618330 178618393 63 ATGTGTGTGTGTATATATATGTGTGTGTGTATATATGTGTGTATATATACACATACATATATC chr4 + 94230402 86633923 86633922 86633985 86633923 86633922 86633985 63 ATGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATC ...x.:...:..:::..x:.:.:...x......:...:....:........:x.::..::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 91984408 NA +3251 chr4 + 190214555 178618332 178618331 178618394 63 TGTGTGTGTGTATATATATGTGTGTGTGTATATATGTGTGTATATATACACATACATATATCA chr4 + 94230402 44815600 44815599 44815661 44815600 44815599 44815661 62 TATGTGTGTGCATACATATGGATGTGTGTATATCTGTCTACACATACACACA-ATATAAATTA .:........:...:.....x:...........x...x.::.:...:.....-.:...x..:. 52M1D10M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 133802732 56411823 +3007 chr4 + 190214555 178724263 178724262 178724326 64 ATTTCTTCCACAACCTTGCCAGCACCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTTTT chr4 + 94230402 61949737 61949736 61949800 61949737 61949736 61949800 64 ACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTT .:.:.x...x::x:...x....:..:.x....:...:...:............xx.x....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 116774526 73440029 +3286 chr4 + 190214555 178767104 178767103 178767162 59 ACAATTCCTTAATATACGTATACATATACACACATATATATGTGTGTGTGTGTGTATGT chr4 + 94230402 6857595 6857594 6857653 6857595 6857594 6857653 59 ATAATTCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGT .:.......:..x.x.::.....:..:.:..::...x..:.......x.......:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 171909509 18305046 +3279 chr4 + 190214555 178767145 178767144 178767210 66 GTGTGTGTGTGTGTATGTGTATCTATGTATGTATATATGTATATACACGCACACACAAACACATCT chr4 + 94230402 79265519 79265518 79265580 79265519 79265518 79265580 62 GTGTGTGTGTGTGCATGTG----TGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTT .............:.....----.:..xx........::..:.:::::......:......:..:. 19M4D43M 47/62 75.8% 62/94230402 0.0% 4/62 6.5% 99501626 90712929 +3982 chr4 + 190214555 178791760 178791759 178791841 82 ATGGTGGTGCACACCTGTAGTGCCAGCTACTTAGGAGGCTGAGTCAGGAGAACCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033198 76033197 76033277 76033198 76033197 76033277 80 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.........:--......x..........:::........:.xx.x...x.............:..x:xx:..:..:.. 13M2D67M 60/80 75.0% 80/94230402 0.0% 2/80 2.5% 102758562 87455993 +3390 chr4 + 190214555 178791904 178791903 178791957 54 AAAAAAAAAAAAAAAAAACAAAAAACAAAAAAACACGCACACACACACACACAC chr4 + 94230402 45036940 45036939 45036993 45036940 45036939 45036993 54 AAAAAAAAAAACAAAAACCAAAAAACATAGAAATACACACACACACAAAAAAAC ...........x.....x.........x.:...:..:..........x.x.x.. 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 133754964 56459591 +3014 chr4 + 190214555 178819514 178819513 178819573 60 TGTTGCCCAGGTTTTGCTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTT chr4 + 94230402 63206531 63206530 63206590 63206531 63206530 63206590 60 TGTTGTTTAGCTTTGGTTTTTTTTGTTGATTTTTTTTTTCCTTCTCTCCTTGTTTTCTTT .....:::..x...x.:..........x:..........::..:.:.::.....x.:x.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 115612983 74601572 +3184 chr4 + 190214555 178819531 178819530 178819588 58 TTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTTTTTGACAAAGTCTC chr4 + 94230402 88153953 88153952 88154010 88153953 88153952 88154010 58 TTTCTATGTGGGTTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTTTAAGAAGGTTTC ...:.x...xx.........x...x...x...........x......:.x..:..:.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 90665578 NA +4076 chr4 + 190214555 178826505 178826504 178826605 101 CATGGTGGTCTGCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATGACGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::.....--....x..................::........x.xx.x...x::.........:.:..x:xx:..:..:..------..x....:.... 9M2D72M6D12M 70/93 75.3% 93/94230402 0.0% 8/93 8.6% 102793308 87421247 +3134 chr4 + 190214555 178830881 178830880 178830943 63 AGAGTGA-GACTCTGTCTCAAAACAAAAAAACAAACAAAACAAACCACAACAAAAACAACAACA chr4 + 94230402 77909543 77909542 77909606 77909543 77909542 77909606 64 AAAGTGATGACTATAACTTAAAAAAAAAAAACCAACAAAACAAACTACAATAAATTCAAAACCA .:.....-....x.:x..:....x........x............:....:...xx...x.x.. 7M1I56M 50/63 79.4% 64/94230402 0.0% 1/63 1.6% 100921338 89293217 +3414 chr4 + 190214555 178830898 178830897 178830956 59 CAAAACAAAAAAACAAACAAAACAAACCACAACAAAAACAACAACAAAAAACAAGTACA chr4 + 94230402 49372035 49372034 49372093 49372035 49372034 49372093 59 CAAGTCAAAAAAACAAACAAAAAACAACACAACAGCAGCAACAACAAAAAAAAAACCCA ...:x.................x.x.x.......:x.:.............x..::x.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 129458863 60755692 +3116 chr4 + 190214555 178837135 178837134 178837243 109 AAATATACAGATATATTTATATTTGTGTGTGTGTATAGTATGTGTGCATATGTCTATTTATGTGTGTATATGTTTATATATGTATATTTCTGAACGTAATTAAAAAATG chr4 + 94230402 74522179 74522178 74522286 74522179 74522178 74522286 108 AAACATTCAAA-ATATTATTCATAGAATGTATCTCCTGTTTGTATGCTTATTTGTGTTTATGTCTGTGTATATTTATATGTCTTTTCTCATCAGTGTAATTCTAAAATG ...:..x..:.-.....xx.xx.x.x:...:.x.x:x..x...:...x...x.x.:.......x...:...:.......:.x.x.x:.:x.x.::......xx...... 11M1D97M 72/108 66.7% 108/94230402 0.0% 1/108 0.9% 104314956 85899599 +3053 chr4 + 190214555 178839190 178839189 178839265 76 GAATTTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATCTCCACACTTATATG chr4 + 94230402 85834525 85834524 85834600 85834525 85834524 85834600 76 GGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG .::....x...x:..x.....x.................:.xx:.:..x::...:....:.xxx:...:x.x.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 93004665 NA +3366 chr4 + 190214555 178839193 178839192 178839262 70 TTTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATCTCCACACTTAT chr4 + 94230402 85834530 85834529 85834599 85834530 85834529 85834599 70 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTAT ......x:..x.....x.................:.xx:....x::...:....:..xx.x..:::.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 93004663 NA +3074 chr4 + 190214555 178839207 178839206 178839267 61 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATCTCCACACTTATATGTT chr4 + 94230402 79265519 79265518 79265579 79265519 79265518 79265579 61 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATT .............::........xx........:...:.::.:.x:x...:.xx.:..:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 99573688 90640867 +3938 chr4 + 190214555 178903667 178903666 178903774 108 TACATATATATATGTATTTGTGTGTGTATATATATGTATACTTATGTATA----TATATATACATGTGTATATACATGTGTTTATATATATATACATGTATATATGTGTATA chr4 + 94230402 21109190 21109189 21109301 21109190 21109189 21109301 112 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:.x....:..:...:.:.x....x.::...x...:.:....:.::....----.:..:x..:.:..:.:..:x....:x.:.:.:.....:.::...x....:::..:.:. 50M4I58M 69/108 63.9% 112/94230402 0.0% 4/108 3.7% 157794477 32420078 +3300 chr4 + 190214555 178903677 178903676 178903761 85 TATGTATTTGTGTGTGTATATATATGTATACTTATGTATATATATATACATGTGTATATACATGTGTTTATATATATATACATGT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTG--TATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:........x...:.:.:.:...:.:--...xx..:..x::......:....x........x.x.::.:.:...:...::. 30M2D53M 57/83 68.7% 83/94230402 0.0% 2/83 2.4% 93069144 NA +3217 chr4 + 190214555 178903715 178903714 178903790 76 TATATATATACATGTGTATATACATGTGTTTATATATATATACATGTATATATGTGTATATATACATATACTTAAT chr4 + 94230402 76709592 76709591 76709663 76709592 76709591 76709663 72 TATATATATGCATGTGTTTATACAAGCATTCACATGTAT----GTGTATCTGTGTTTATATATCTGTTGACTGAAT .........:.......x......x.::..:.:..:...----:.....x.:...x.......x::.xx...x... 39M4D33M 54/72 75.0% 72/94230402 0.0% 4/72 5.6% 102194123 88020432 +3565 chr4 + 190214555 178924410 178924409 178924509 100 ATGGTGGTAGACGCCTATAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGAAGGTTGCAGTGAGCTGACATCATGCCA chr4 + 94230402 76033198 76033197 76033289 76033198 76033197 76033289 92 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .::.....:x...--.:..:.:............:........x.xx.x...x::........::.:..x.xx:..:..:..------:....x...... 13M2D67M6D12M 66/92 71.7% 92/94230402 0.0% 8/92 8.7% 102891212 87323343 +3036 chr4 + 190214555 178956815 178956814 178956855 41 ACTCTTTGTTTTTTGTTTGTTTGTTTGTTTTAGACGAAGTT chr4 + 94230402 78723712 78723711 78723752 78723712 78723711 78723752 41 ACTTTTTGGTTTTTGTTTGTGTGTTTGTTTTAAGCGAAGTT ...:....x...........x...........::....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 100233103 89981452 +3512 chr4 + 190214555 178957363 178957362 178957434 72 GCGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGGGAATCACTTGAACCCAGGAGAAGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::...:....x.xx.x...x.............:..xxxx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 102924157 87290398 +3760 chr4 + 190214555 178959795 178959794 178959918 124 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC-CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:....:-.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:...x....:.:x.xx..:...::...:::...:...:...::..:.:.x.:. 13M1D110M 76/123 61.8% 123/94230402 0.0% 1/123 0.8% 115262678 74951877 +3224 chr4 + 190214555 178959797 178959796 178959900 104 TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--------CTTTCTTTCTTTCTTTTTCTTTCT-TTCCTTCCTTCCTTCCTTCCTTCT chr4 + 94230402 63697122 63697121 63697234 63697122 63697121 63697234 113 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTT ...:.:::.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....--------.:..:x:.:....x:xx.......-.:..:..:..:...:.......:. 56M8I24M1I24M 68/104 65.4% 113/94230402 0.0% 9/104 8.7% 115262675 74951880 +3047 chr4 + 190214555 178959799 178959798 178959904 106 CTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTCTCT chr4 + 94230402 85792749 85792748 85792854 85792749 85792748 85792854 106 CTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTT ...::...:...x:....:.:::x.x.x.x:...::x.x...::....:xxx...x..::.::x:...x::..x..xx.:......:...:.:.:....:....:. 106M 62/106 58.5% 106/94230402 0.0% 0/106 0.0% 93167050 NA +3354 chr4 + 190214555 178959805 178959804 178959930 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x....xxx::::.x.:..:::x.xx..:.......:.::::.:...:...::..:.:.x.:. 13M3D110M 73/123 59.3% 123/94230402 0.0% 3/123 2.4% 115262688 74951867 +3103 chr4 + 190214555 178960531 178960530 178960598 68 TTTTTTTAGTGAGAGTTTTGTTTTGTAGAAAGTGTTTTCTTTTGTTGTTGTTGTTGTTTTTTTATAAA chr4 + 94230402 28125432 28125431 28125498 28125432 28125431 28125498 67 TTTCTCAAATGAGCATTT-ATCCTGTGGAAAGGGTTGTGTTTTTTTGTTGTTGTTGTTTTTTTTTTAA ...:.:x.:....x:...-:.::...:.....x...x.x....x...................x.x.. 18M1D49M 51/67 76.1% 67/94230402 0.0% 1/67 1.5% 150835099 39379456 +3009 chr4 + 190214555 178964818 178964817 178964861 44 TCTTTCTTTTTTATTTTTTTCTTTTTTATTTGTTTATTTCATTT chr4 + 94230402 46398030 46398029 46398073 46398030 46398029 46398073 44 TCTCTCTCTCTTATTTTTTTCCTTTTTATTTCTTTATTTCCCTT ...:...:.:...........:.........x........x:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 132566788 57647767 +3340 chr4 + 190214555 178997102 178997101 178997180 79 GTGGTACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAGTCCCTTGAACGCAGGAGAAGGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.::.--......:...........::........x.xx.x..:x.x.......x...:..xxxx:.....:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 102963901 87250654 +3016 chr4 + 190214555 179013210 179013209 179013316 107 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAGGAAGGGAGGAAGGAAGGAAGCAAGGGAGG chr4 + 94230402 75817436 75817435 75817542 75817436 75817435 75817542 107 AAGAAACAACAAGAAAAAGACAGGAAGAATGAGGAGGATAAAATGAGAAATAGCAATAAAAATGTCAGAAAAGGAGGGCAAGGAGGTGCTGCAGGCACCAGAGAAGG ......x..x:.:.:.....x..:.....x..:::::.x...:x:.....x.:x:.x..:..x.xx......:.:::.x....::.x:xx.x...x.x..::.:... 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 103195774 87018781 +3303 chr4 + 190214555 179013217 179013216 179013316 100 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAAGAAAGAAAGAAAAAGGAAGGAAGGGAGGAAGGAAGGAAGCAAGGGAGG chr4 + 94230402 10269792 10269791 10269893 10269792 10269791 10269893 102 AAACAGAAAAACAGTGAAAGAAGAAGAGAATAAAGAAACAAAAGGCCAAGAAAAGCATGAAGAACAAAGGAAAGAGTATTGGGAAGAGAGAATAAATGAAGG ...x.:.:...x.:x.......::.:....x:..::..x:....:--........x.x...::.x.......:..:x:xx..:.:..::...xx..x.:... 45M2I55M 65/100 65.0% 102/94230402 0.0% 2/100 2.0% 168743425 21471130 +3013 chr4 + 190214555 179013236 179013235 179013316 81 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAGGAAGGGAGGAAGGAAGGAAGCAAGGGAGG chr4 + 94230402 65503041 65503040 65503120 65503041 65503040 65503120 80 GGAGGAGAAAAAGGAAGAAAAAGATAAAGTGGATGGGGGAAGAACAAGCATGGGAAAAAGGCAAGAAGG-GGCAAGGGGAG .:.:..:.:....:......:.:.x....x::.x:::.:.....x...x.x..:.:::...x.:.....-:.......::. 69M1D11M 52/80 65.0% 80/94230402 0.0% 1/80 1.2% 113510195 76704360 +3472 chr4 + 190214555 179013302 179013301 179013381 80 AGGAAGCAAGGGAGGGAGGGAGGGAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAACAAAGAAAGAAAGA chr4 + 94230402 94029714 94029713 94029793 94029714 94029713 94029793 80 AGGAGTGAAAAGAGGGGGGGGGGGAAATAAAGAAGAAGGGAAAAAAAGGAAAAACAAACCGTGTAATGAAAGAGGGATGA ....:xx..::.....:...:......x.........:.:....:..:....:.x...xx:x.x..::..::.:.:.x.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 84983588 NA +3363 chr4 + 190214555 179013335 179013334 179013444 110 AGAAAGAAAAAG----AAAGAAAGAGAAAGAAAGAAACAAAGAAAGAAAGAAAGGAA--GAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGA----------GAAAGGGAAAGGAAAGGA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAAC--AGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........:...----.:...:.....:..........--....:xxx....xx...--.:..x.x::...:x..:.....:.....::....:.:.:----------...:x:x:......:... 12M4I22M2D17M2I39M10I18M 78/108 72.2% 124/94230402 0.0% 18/108 16.7% 127864956 62349599 +3170 chr4 + 190214555 179013335 179013334 179013394 60 AGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAACAAAGAAAGAAAGA---AAGGAAGAAAGAA chr4 + 94230402 75241531 75241530 75241593 75241531 75241530 75241593 63 AGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ............:........:...:.x..:.x..:......x..:.---....:.x..x... 47M3I13M 48/60 80.0% 63/94230402 0.0% 3/60 5.0% 103771804 86442751 +4136 chr4 + 190214555 179013342 179013341 179013455 114 AAAAGAAAGAAAGAGAAAGAAA-GAAACAAAGAAAGAAAGAAAGGAAGAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGAGAAAGGGAAAGGAAAGGAAAGGAAGAAAA chr4 + 94230402 9464440 9464439 9464554 9464440 9464439 9464554 115 AACAGAAAGAAAAGGCAGCAAACGATAAAAAGGAAGACAAAAAGGCAGCAACAAAAGGGAAGAAAGGAGCCAAAGGCAAAGACGAAACTAAACAAGAGGATGCAAAAGAAGAAAA ..x.........::.x.:x...-..x.x....:....x.:.....x..x..x....:.........:.:xx....:x.....x::.:xx.::x..::.:.x.x...:........ 22M1I92M 78/114 68.4% 115/94230402 0.0% 1/114 0.9% 169548902 20665653 +3983 chr4 + 190214555 179013343 179013342 179013484 142 AAAGAAAGAAAGAGAAAGAAAGAAACAAAGAA--------AGAAAGAAAGGAAGAAAGAAAAAGGAAGAAAGAAAGAAAAGAG--AAAGAAAGAGAAAGGG----AAAGGAAAGGAAAGGAAGAAAAAGAAAGAAGAGGAAGAAGGGAACGAAGGA chr4 + 94230402 49044652 49044651 49044807 49044652 49044651 49044807 156 AAAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAAGTAGTGAGAAGCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGA ...::.xx.........::..x..:x:.xx.:--------.......x.:.x..x:....:x.xx...x:......::.....--.........::..:..----...x.....:....:.....x:.::x....:.xx:...xx:.:.x..:... 32M8I43M2I16M4I51M 95/142 66.9% 156/94230402 0.0% 14/142 9.9% 129968691 60245864 +3252 chr4 + 190214555 179013365 179013364 179013431 67 AAACAAAGAA-AGAAAGAAAGGAAGAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGAGAAAG chr4 + 94230402 5788306 5788305 5788373 5788306 5788305 5788373 68 AAACAAAGCATACTAAGAAAGAAAAGGTGAGAAAGGTAGAAAGAAAGACAAAAGACAAAAAGAGTAAG ........x.-.xx.......:..:::x..:.....x...........x..:...x.:......x... 10M1I57M 52/67 77.6% 68/94230402 0.0% 1/67 1.5% 173225059 16989496 +3138 chr4 + 190214555 179013407 179013406 179013478 72 AAAGAAAAGAGAAAGAAAGAGAAAGGGAAAGGAAAGGAAAGGAA--GAAAAAGAAAGAAGAGGAAGAAGGGAAC chr4 + 94230402 38078781 38078780 38078854 38078781 38078780 38078854 74 AAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAAC ..::.....:..........:......:..:...x.x..:....--.xx.x...:.:..x:.:..:..:::... 44M2I28M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% 140934626 49279929 +3126 chr4 + 190214555 179018761 179018760 179018843 83 CGTGGTGGTGGGCACCTATAATCCCAGCTACATGGGAGGCTGAGGTAGGAGAACCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x.:..:.:........x..::........x:xx.x...x..........::.:..x:xx:..:..:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 102985564 87228991 +3060 chr4 + 190214555 179036958 179036957 179037069 112 CATTTTATTTGTATCTTATTCATTACTCATATAGAACTTTTTAAATATCTCA---TTATCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGAGAGAGA chr4 + 94230402 51335291 51335290 51335403 51335291 51335290 51335403 113 CATCCTCCTTATGTCTTTTCAGTCACTTGGCATGA--TTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTCAAAAAAAAAAA ...::.x:..:.:....x.:x:.:...::xxxx..--...::x::.x.....---..x.....x.:.:...x......:.........::..:...::.:...:.:.:.:.:.:. 35M2D15M3I60M 69/110 62.7% 113/94230402 0.0% 5/110 4.5% 127701667 62512888 +12217 chr4 + 190214555 179038448 179038447 179038850 403 TAATTAAGCAGTTTTTCAAAGAGCAAACACTT-----CATATGCATAACAATCTTACCTTATCTGCTCTTGCAGGTTTGTCGTTTTTTGTATTTATGATTATGCTTTCAAAAATACATGCAAATTTATTGTTGAAATTACAGTATTTGGCTATTCTTTCT--AATACCTATCACAGCAATTATTGTATGTGACACCT---GGAAGCAAAATGTCATTCACACTATTCTATC---------TAATTGGAATATCATCCATTATTGATTTTGTATTCCATTTAGATGTAGCTATAGTTGACTTGAAATCTAGGAGATATAATGGAATTTATTACTATCAAAAGAGTACAACAACTTAGAAAAAA-ATCTCAGACAAATAAAAAGAACAGAGTCTGC-TGCCTCCCC--AGTGATGATCGCTGTGATTG chr4 + 94230402 43016229 43016228 43016647 43016229 43016228 43016647 419 TAATTAATTGTATTTTCAAAGA-TAAGGATCTGTGAGTACATGCATAGTAACAGCACCTTCTTTCCTTCCACATCT-----GTTCTCTGTGCTTATGAAAATGTCTTCATATATTCATGGCAATTTATTATTGACTTTATAGCATTTT-CTATTTTTTTTTCAATAAATATTACAGTGATTACTGAGTGAGACATCTTAAGGAAAAAAAAAAAAACACCTTATATTCCATCATTTAGATGTGATTTGTATATCATCCATTATTGATTTACTGTTCCATCTAGATAGTATAATAGTTGACTTGAAATCTTGAAACTGTTATGAAATTTACTGATGTCAAGGGAGTACAATAAGTAATAGGAAACAGCTTAGTCAAATAAAAGAAATACAGTCTGCACATCTTCACTAAATGAAAATTCCTGTAACTG .......x::xx..........-:..:x.::.-----:.:.......::..:xx:.....x.:.x..::::..xx.-----...:.:...::......xx...::....x.x..x....xx........:....xx...:..:....x-.....:...:.--....xx...:....::....:..x:..x....:..---....:x....x:xx.:x.x:xx.....:...---------.:...x.x....................xx.:......:.....:xx::x..................x.:.:x.:.x...:......:.:x.:....::........:..x.x.x.::...-.x..:..x.........::..:.x.......-:::..:.x.--.:...x:..:x....:.:.. 22M1D9M5I39M5D67M1D11M2I35M3I31M9I122M1I31M1I9M2I20M 274/396 69.2% 419/94230402 0.0% 30/396 7.6% 136022219 54192336 +3877 chr4 + 190214555 179046926 179046925 179047023 98 CATGGTGGTACGCACATGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG----TGA-GCCAAGAACATG chr4 + 94230402 76033197 76033196 76033297 76033197 76033196 76033297 101 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATG ..::.....--....:....:.:...........::........x.xx.x...x..........::.:..x:xx:..:..:..----...-......x.x... 9M2D72M4I3M1I12M 72/96 75.0% 101/94230402 0.0% 7/96 7.3% 103013729 87200826 +22563 chr4 + 190214555 179048716 179048715 179049371 656 GTGGAATTTATTGATGCCTCTCATTTATCCTAAAAGACAGA-----TTCTTCTTTTACAAGACAACAGATGAATTCCCTTGAGGTTATTCCTCACTTTCTGTGTGGTGATATACAGAGAATAGGTGAAGAGCTGATGAC-TGGGT--AGGAGTTA-TTTCTAGGAAAGGTCT----AGTGTTGATCACTGTATTAG----AAAAAGAGTAATTTA-AGAAATGTTGTAAATATTCGTAATATCACATTAGCACATACAATAATTGTCAGCTCCATAACCAGGCATGCTGTTATC-TCTCTTTCTAGGATAGCTAATACATCCTAA-AATGCTCTGATACGCTGCGGGGTTACTAACACTGTCTTTAATGCAGCATTTTTCTTTGAAGGACTGAAACCAAGTGGTCTCTCCAGGGCATCATAAATCTTAGTTTTCATTTAGAATATAGAAACCATAAAGAAAATAAAACAATATTTAAGCCTCAGAGAAGGCCAATTTCCAATACGAAATGGGATTGTTATGAGAGTAAAGGAATGAGCAGAGGAGAATAGGAACACTGCAATGTACACGAGGCTGCCAGAAACAAAATAAAGGAGGCACGGGAGCCCTGGGGACTCTACATGATAGAGCAGTGACCAGAAAACTGAAATGGTCCACATGGACT-ATTCATTTTTTCA chr4 + 94230402 43018542 43018541 43019210 43018542 43018541 43019210 669 GTGTAATTTATTAAAGTATTACATATGAAAAAAAAGACAAAACAAATCTTTCTGTTATAAGACAGCTGAAGAATACCCTGGAGGTGTTTAGCAACTTCCTGAATAGTGATATAAGCAGACTGGTTTGAGTACT--TGACATGAGTTTGAGAGTTACTTTCTGGCAGAAGTATTTCAACTATTAAAAAATGCCTTATGCTCAGAAACTGTAATTTCCACAAATGCAATAAATATTCATAACAGAA-ATTAA---ATATACTA--TGTATTTTCCTTATCTGTATTCACTGTTATCATATGTTTCTTGTGCAGTTCATATTTCATAATGAATTTCTGATAAGTTGCAGGAATACCACCATTGTTTTTAATGTAGCATTTCTATTTGAAGGACTGAAACCAAGTGGTCTCTCCAGGGCATCATAAATCTTAGCGTTCACTATGAATACAGAAATCATAAAAATTATAAAACACTATTTAAACTTATGAGTAAACCAATTTTCAGAATGGAATGGGATTGCTATGTCAGTAAAGAAATGAATACATAAAAGTAGGGATTCTCCAATATCCACAGTGCTGCCAGAAGGAGGATGGAGGAAACACCTGAATTTCAAAGAAACTATATTATAGAGCAATGACCAGAAAGCCAAAATGATTCACAAGCATTCATTCATCTTTTTA ...x........:.x.:x.:x...x.:xxxx........:.-----.::....x...:......:.x..x....x....x.....xx..xx:x....:...x:.:........x:x...x.:.x.x:..x:..--....-..:..--::......-.....:.x.:.:..x.----.x.:..:.xx.x..:x...x----.:...xx.......x-.x.....:x:.........:...:.xx.-....:---...:.x..--...xxx:...x..x.::x::x::........-.x.x.....x.x::..:.x...:x..x...-:.xx:.......x.:...:..:x...:.x..:...:.......:.......:.x.................................................:x....:.xx.....:.....:......:.xx........x.......:.:.xx...x.::.......:..:x.:.:..........:....xx.......:.....::.x.x:.:.:....:.:x..x....:.x...::x..........:x.::..::....::...xx..::::::::..xx...:..x........:..........:.::.....:.:....x.x.:.-......:....:. 41M5I87M2D4M1I5M2I8M1I16M4I20M4I15M1I28M1D5M3D8M2D31M1I30M1I337M1I13M 456/648 70.4% 669/94230402 0.0% 29/648 4.5% 136030174 54184381 +12552 chr4 + 190214555 179051277 179051276 179051620 344 GGGAAGGAGGTAAAGAGAAGTTAAAGAAAGA---------------CAACAGATTTTAA-AATTCCTATCTTACTCAAATGCTCAAATTCGAGCTGGAATACAACCCATGCAATCTGCAGGGTGTCAGTAAGAAACAGAGCAGCAGATGAGTAGGAATTGACATCTGTGGCTTGGGAAAAAAATTGGCAAGGAGAGCA-----AAACAAGTAG-----TTAAAGAGCTCTAAATGGCCATAAAAATATAGTCTTCTGAAAAACACAGG-ACAGCTTAAATTCTTATTTTTATTATCTTCCCCTATAAAGTAATACATGTTTAGGAGGATAGCCATAAATAAGAAACAAAATAGTCATTCTAAAAAGAAATA chr4 + 94230402 43021028 43021027 43021381 43021028 43021027 43021381 354 gaaaaaaaattaaagaaaagtaaagtaaagaatgcaaagaaaaCAGTAGCAGATTTTGAGAAGTTATCTGTTACTCAAATGATCCAATTTGGGTTGGAATGTTACCCATATGATCTGCAGGGTGTTTGGAAGAAGCAGTGCAGCAGCTGAATAGGAAATGACATCTGTGGTTCAGGGAAAGACTTGGCAAGAAGAAAACAAACAAACAAATAAAAAGTTTAAAAAATGCTAAATGGCCATAAAATTGCAGTCTTCTGTGAAGCATGGGTGCAGTTTAATTTCTTAATTTTATT---TTCTGCTTTTAAGTAAAGACTGCT-----AGATAG---------AGACTCAAAATGCTTTTTCTGCAAAAACACA .::..::.:x......:....x..:x.....---------------:.:........:.-..x.:x.x.x...........x..x....:.:.:......::x......:::.............:x.x.....:...x.......x...:......x............:.::..:...:.x........:...:x.-----......:..:-----.....:.::x................x.::.........x:..:..::..-:...:....x......x.......---...:x..x.x......x:xx..:.-----:.....---------...xx......:x.:x....:x...:.x.:. 31M15I13M1I138M5I10M5I50M1I24M3D24M5D6M9D31M 242/327 74.0% 354/94230402 0.0% 44/327 13.5% 136030249 54184306 +3038 chr4 + 190214555 179062700 179062699 179062766 67 AGAAGGAAGGGAATTATAAATGTCAGAGCAGAAATAAAATTAAGAAGAGTCTCAAAAATTAATAGAA chr4 + 94230402 79034004 79034003 79034070 79034004 79034003 79034070 67 AGATGGAAGAGATTTGTAAATACCATAGCAAAAATAAAGTAAAGAAAGGGTTTAAAGGATAAAATAA ...x.....:..x..:.....::..x....:.......:.x.....::.x:.:...::x...x.x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 100028696 90185859 +3390 chr4 + 190214555 179081188 179081187 179081270 83 CGTGGTGGTGCACACTTGTAGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATCGCTTGAAGCCAGTAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--......:.........:.::.:......x.xx.x...x.:......x....x..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 103047991 87166564 +3027 chr4 + 190214555 179091161 179091160 179091208 48 CTCCTGTAATTGAATTTTATTCTTTATTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 5151584 5151583 5151631 5151584 5151583 5151631 48 CTCCTGCGATTTGATTTTATTCTTGATTTTTTTCTTCTTTTTCTTCTT ......::...x:...........x...:....:..:.....:..:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 173939577 16274978 +3157 chr4 + 190214555 179105911 179105910 179105965 55 GTTTGTTTTTTTCCTTTTCTTTTTTTCTCCCTCTTTTTCTTCCTTTCTTTTTTCT chr4 + 94230402 42679536 42679535 42679590 42679536 42679535 42679590 55 GTTTTCCTGCTTGTTTTTTTTTTTTTCCCCCTCTTTTTCCTCCATTCTTCTTTTT ....x::.x:..x:....:........:...........:...x.....:...:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 136426375 53788180 +3025 chr4 + 190214555 179117790 179117789 179117835 46 TTTTTCTTTTCTTTCTGTTTTTTGTTTTTTGTTTTTTTTTTTTGAG chr4 + 94230402 77610505 77610504 77610550 77610505 77610504 77610550 46 TTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTCATTTGAG .....:....x..x:....x..................:x...... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 101507285 88707270 +3209 chr4 + 190214555 179123882 179123881 179123951 70 CGTAGTGGCGGGCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--..................::........x.xx.x...xx:.x.......:.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 103090685 87123870 +3160 chr4 + 190214555 179135460 179135459 179135513 54 ACACATATTTGTACACATATATATATATCCATGTATACACACACATACACACAT chr4 + 94230402 58675387 58675386 58675440 58675387 58675386 58675440 54 ACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATAT ......x......::..........:.::...:.:.:........:x..x.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 120460073 69754482 +3002 chr4 + 190214555 179138291 179138290 179138335 45 CCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAGAGGTATAACTTCT chr4 + 94230402 3817486 3817485 3817530 3817486 3817485 3817530 45 CCCCCCCCCCAAAAAAAAAAGGAAAAAAAAAAGCATATAGTTCCT ....................::.........::x:....::.:.. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% 175320805 14893750 +3198 chr4 + 190214555 179151244 179151243 179151323 80 CCCCATTTTTCAGATGAAGAAACTGAGGCACGACAAGATCAAGAAACTTGCTCAAGGTCATAACAATCAGGTGGTGGGGC chr4 + 94230402 83845998 83845997 83846077 83845998 83845997 83846077 80 CTCAATTCTACAGCTGTACAAACTGAAGCTCAAAGAAACTAAGCGTCTTGCCCAAGGTCATATTGAGCTGGTGGTTGAGC .:.x...:.x...x..x.x.......:..x.:.x:.:.::...x:x.....:..........x::.x.x......x.:.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 95305246 NA +3760 chr4 + 190214555 179201483 179201482 179201564 82 GTGGTGGGAATCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGGATCGCTTGAGGCCAGACATTTAAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:...........:.........x.xx.x.:.x.:.....:x.....x::..x:.....:.. 6M5D71M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 103168282 87046273 +3023 chr4 + 190214555 179243961 179243960 179243999 39 AAGAGCACTAATTCCATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 88639387 88639386 88639425 88639387 88639386 88639425 39 AAGATCACTGATTCCATTTTTCTTTTTTTTCTTTTTTTT ....x....:...........:........:........ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 90604574 NA +3121 chr4 + 190214555 179255605 179255604 179255662 58 CACACACACACACATA--CACACACACACACACACATATATATATATATATATAACTTCA chr4 + 94230402 74526077 74526076 74526136 74526077 74526076 74526136 60 CACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGATTGCTTCA ...............:--..:.....x.:.:.:..:.......:...x..x..x:..... 16M2I42M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 104729528 85485027 +3023 chr4 + 190214555 179270492 179270491 179270559 68 GTGCCAAGAAATAAAAAAGCTAATTATTTTTATTTTTCTATTTTTGGA----GGAAGAAAAAATTCAATTTT chr4 + 94230402 86013309 86013308 86013380 86013309 86013308 86013380 72 GTGACAAGAAAGAGAAGGGTAATTTATTATTATTTTTCTTTTTTTGGAGGGGGGAGGAGAAAAATAGCTTTT ...x.......x.:..::.:x.x.....x..........x........----...:..:....x.x:x.... 48M4I20M 52/68 76.5% 72/94230402 0.0% 4/68 5.9% 93257183 NA +3295 chr4 + 190214555 179277461 179277460 179277541 81 ATTTCCTCCCCTTTATATTCCTATGAAGGATCTAGCACCATCACTGTCTATCTCATGCTCCCCTTTCTTAAAAACTCTACT chr4 + 94230402 18935843 18935842 18935923 18935843 18935842 18935923 81 ATTTTCATTTCCCTATACTTCTATGAGGTATCTCACATCACCACCGTCTTTTGCATTTATCTCTTCTTTAATGACTCTGCT ....:.x:::.::....:.:......:.x....x:..:..:...:....x.:x...x:x:.:...::....x:.....:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 160341618 29872937 +3101 chr4 + 190214555 179279180 179279179 179279259 80 ACAAAATAGATTCTACTACTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGATTTTTGAGATGGAGTTTCACTCTTGT chr4 + 94230402 28697635 28697634 28697714 28697635 28697634 28697714 80 ATAAAACAGTTTTTTCAATGCTCTTTTTTTTTCTATTTTTTTTCTTTTTTTCCTCATTTGATAATAATTTTTACCTCTGT .:....:..x..:.x.x.:x:......:......x........:.......:xx:x.....x.xx:.x...:..:::... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 150581545 39633010 +3298 chr4 + 190214555 179347282 179347281 179347329 48 ACAAACAAACAAACAAACAAAACAAAACAAAACAAAAAAAACTAGCAG chr4 + 94230402 30735464 30735463 30735511 30735464 30735463 30735511 48 ATAAGCAATCAAACACATGAAACAAAACAAAACAAAAAAAACCAACAG .:..:...x......x.::.......................:.:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 148611818 41602737 +3320 chr4 + 190214555 179370535 179370534 179370606 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCACGAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.x:.x...xx:.........:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 103337329 86877226 +3475 chr4 + 190214555 179375503 179375502 179375576 74 TCAAAGCAGTATATAAATGAATATATATACACATGCCCATATAAACATTT--AAGCATGTCTTTGAATGTTTTTAT chr4 + 94230402 29794190 29794189 29794265 29794190 29794189 29794265 76 TCAAAGTAGTTCATAAATGAGCATATATAGACATGTACACATACACATTTTAAAATAGGTTATTGTCTGTTTCTAT ......:...x:........::.......x.....:x..:...x......--..::.x..:x...xx.....:... 50M2I24M 56/74 75.7% 76/94230402 0.0% 2/74 2.7% 149581313 40633242 +3130 chr4 + 190214555 179452970 179452969 179453020 51 AAAAAAAAAAAAAAAAGAAAAAGAAAAACATGGCCCATCTAAAGGGAAAAA chr4 + 94230402 28575497 28575496 28575547 28575497 28575496 28575547 51 AAAAAAAAGAAAAAAAAAAAAAGATAAATACAGTTTATTTAGAGGGGAAAA ........:.......:.......x...:.::.:::..:..:....:.... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 150877473 39337082 +4464 chr4 + 190214555 179475577 179475576 179475708 132 AATAAAAATGATGTACATCTTATTGTGGATTTATTTAGCAAACAATTCCCAGAAATCACCTTTATTACAGGGAATAAAACAGATGTGTAACTCCCTCTTTTGGATGTCATA--TTTACACAAAGAGGCAACAAT chr4 + 94230402 8559791 8559790 8559923 8559791 8559790 8559923 133 AATAAAAATGATGTACGGTCTGTTGAGGAGTTATTCAGCAAGCAATTCCTAGGGACCACCTTTACTGCAAAGTACTGAA-AGCTATCCTGAACTCTTTATACGATGCCAGAGGTTTACTCAAAAGCACAGTAGT ................:x::.:...x...x.....:.....:.......:..::.:........:.:..::.x.:x:..-..x.:.x:x:xx.:..:.x.xx....:..x.--.....x....::x:..::.:. 79M1D31M2I21M 87/131 66.4% 133/94230402 0.0% 3/131 2.3% 170915786 19298769 +3152 chr4 + 190214555 179478041 179478040 179478093 53 AAAAAAAAAAAAAAAAAAGAAAACTAATTGTGGGTTTTACCCTCTCAAATGGT chr4 + 94230402 67164717 67164716 67164769 67164717 67164716 67164769 53 AAAAAAAAAAAAAAAGAGGAAAATGTGTCATGAGCCCTACCCCCTCAAATGGT ...............:.:.....:xx:.::..:.:::.....:.......... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 112313324 77901231 +3190 chr4 + 190214555 179483510 179483509 179483580 71 GGGAATCAGAGGAGAGAGGAAGAGAGTTTTTTGGTGGGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTTTT chr4 + 94230402 23878793 23878792 23878863 23878793 23878792 23878863 71 GGAATTCAGAAGTATCAGCAGAAAAACTTTTCAGGTATTCTTTTTGTTGTTGTTGTTTGTCTGTTTGTTTT ..:.x.....:.x:xx..x.::.:.::....::.xx:x.:..:.................:.......... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 155604717 34609838 +3008 chr4 + 190214555 179483546 179483545 179483582 37 GGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTTTTTG chr4 + 94230402 25538665 25538664 25538701 25538665 25538664 25538701 37 GGGTTTTTTGTTGTTGTTGTTTGTTTGTTTGCTTTTG ..x...:........................:..... 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 153944881 36269674 +3083 chr4 + 190214555 179492521 179492520 179492598 78 CCCTTCCCTTCCCCTTCCTTTCCTTCCCTTTCCCTTCCTTTCCCTTTATCCTTTTTTTCCTTTCCCCTT---CCCTTCCCT chr4 + 94230402 58593441 58593440 58593521 58593441 58593440 58593521 81 CTTTTCTTTTCCCACACTTTCTCATCCCATTCCCCTCATCTCCCTTTTTTTTTTTCCCCCATTCCCTTTAAGATCTTCCCT .::...::.....x:x.:..::.x....x.....:..x.:.......x.::....:::..x.....:..---x:....... 69M3I9M 53/78 67.9% 81/94230402 0.0% 3/78 3.8% 120899080 69315475 +3010 chr4 + 190214555 179492569 179492568 179492613 45 TCCTTTTTTTCCTTTCCCCTTCCCTTCCCTTCCCTTCCCTTCCTT chr4 + 94230402 51227414 51227413 51227458 51227414 51227413 51227458 45 TCCTCTTTTCCCTTTCCCTTTCCCTTCCCTTTCCTTTTTTCTTTT ....:....:........:............:....:::.:::.. 45M 35/45 77.8% 45/94230402 0.0% 0/45 0.0% 128265155 61949400 +3075 chr4 + 190214555 179492641 179492640 179492703 63 TTCCCTTTGACTTCCTTTTCCCTTTTTCCTTCCCTCTGCTTTCCCTTCCTCTTCTCTCTTTTC chr4 + 94230402 53459253 53459252 53459315 53459253 53459252 53459315 63 TTACTTTTAAATTCTCTTTCCCTTTGCCCTCCTTTCTGCCTCTCCCTCCCCCCTTTTTTTTTC ..x.:...:.x...::.........x:...:.::.....:.::..:...:.:::.:.:..... 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 126033388 64181167 +3355 chr4 + 190214555 179492692 179492691 179492812 121 TTCTCTCTTTTCCCTTCCTTTCCTTTCTCTTTCTCTCTCTACCTCCTTTCCTTCCTTCCTTTCTTTTAATAGGAACAACATAAGAAAAGTCACGACGGTTCTCAAAAGAGTGAGGCAGGAG chr4 + 94230402 66421020 66421019 66421140 66421020 66421019 66421140 121 TTCTAAATTTTTCCTTCTTTTCCTTTTTATTTCTTCTTTTGTTTCCATCTTCCCCTTTCTCCTGGTTTAAAGGAAAAAAATAACTACCATGAGCAAGTCCATTAAAGGAGCGTGGCTGGAG ....xxx....:.....:........:.x.....:::.:.:::...x.:::::....:..:::xx..x.x.....x..x....xx.xx:.x.xx.x.x::x.:...:...:.x...x.... 121M 73/121 60.3% 121/94230402 0.0% 0/121 0.0% 113071672 77142883 +3097 chr4 + 190214555 179539695 179539694 179539760 66 ACCAAGACAGTCC----AGAAGTATCACACACACACACACGCACACACACAAACAAAAAACAGAGAAAGT chr4 + 94230402 39719006 39719005 39719075 39719006 39719005 39719075 70 ACTAAGATAGCTTGTAAAGAAGCATCAATACCACACACACGCACACACAAAAAAAAAAAAAGAAAAAAGT ..:....:..:::----.....:....xxxx..................x...x......x::.:..... 13M4I53M 50/66 75.8% 70/94230402 0.0% 4/66 6.1% 139820689 50393866 +3199 chr4 + 190214555 179559310 179559309 179559365 56 AAAAAGAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x...........x.:......x.x......:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 178064310 12150245 +3130 chr4 + 190214555 179559312 179559311 179559365 54 AAAGAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 90030076 90030075 90030129 90030076 90030075 90030129 54 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATATCTA ...x.......xxx:...::..............:.:.:............x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 89529236 NA +3271 chr4 + 190214555 179559312 179559311 179559367 56 AAAGAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 178064312 12150243 +3411 chr4 + 190214555 179559312 179559311 179559371 60 AAAGAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATA chr4 + 94230402 1494996 1494995 1495055 1494996 1494995 1495055 60 AGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .::....x.:.........x.:....x..........:.:..:...:.....x....::. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 178064316 12150239 +3374 chr4 + 190214555 179559314 179559313 179559369 56 AGAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .:.x.:.........x.:...............:.:..:...:.....x....::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 178064314 12150241 +3196 chr4 + 190214555 179559319 179559318 179559440 122 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT-ACACATTTACTCTTACCATCTTTACTATTTTCAAGTGTACAATTCAGTTGTAATAAATCTCCTCTTTT chr4 + 94230402 85548420 85548419 85548516 85548420 85548419 85548516 97 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACAT--------------------------GGATATCCATTTTAGTTGTTGTAAAACTTCTTGTTT .............:.:xx....:...:.:.:.::...:..........x.....-.x....--------------------------:::.:.x..x..:......x:....x..:..:x... 54M1I6M26D36M 70/96 72.9% 97/94230402 0.0% 27/96 28.1% 94010899 NA +3297 chr4 + 190214555 179559321 179559320 179559373 53 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548420 85548419 85548472 85548420 85548419 85548472 53 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA .............:.:x.....:...:.:.:.::...:..........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 94010901 NA +6624 chr4 + 190214555 179560229 179560228 179560550 322 AGAAAGCCTATTTTCCTTTTTTTC----TCCTTTTTCACAACATTGCTTTCTCTTAAGTACCACTTAAAATTCAAGTAGG-------GTTTTTTTTTATGACTAAGGTCACATTATAAAATAGCATATAAGATGAAAGTAATAGAGTGTAGCCAAAGAGGGGCGTGAAAATGAACACATCAGAAGCCAGTGTTGCTT---GGGCGCAGTTTCAGAGGTGTTCATTTTCATTGGCTCTTTAAGGTAGGCTGACAGGAACAATCAGTTGCCTCATAGATCACTGACAGAGGCTCAGGAAGACAGATGACAGGCAGAATAGCAAACCCCACAGAAATTA chr4 + 94230402 43558605 43558604 43558926 43558605 43558604 43558926 322 AGAAACCTGAATTTCTTTTTCTTTAGTTTCCTGTTTAA--GCACTGCAGGGTATGTAGTGACACTCTAACCCAAAATAAATATACATGTATTTTTTTAATCCCAAGCTGA-ATAGCAAAACAGTGTGTATA--GAAAGTAATAAGGTATAGCTCAAACCTAGTGTGAAAATGAACAAATCACAAACAAGCATTTTTTTCCAAGCTTAGTTTT-GATGTGTTTGT--------GTGTTCTGATAAAAGCTGACAGGTAGAACAATTTGCTTTTTACGACACTGATGGAGTCCCAGGAAGACAGGTGACAGGAGCAAATGAAAACAATACAAACATCA .....x.:x.x....:....:..:----....x...x.--:..:...xxxx.x.xx...:x....:x..x::x..:..::-------..x........xxx.:...x.x.-..x::....:..::.:..x:--..........::..:....:x..:xxx:.:.............x....x..:.x..::..x:..---::..x:.....:-..x.....::.--------.:x:.:.:.x:x.:.........x.x..:x.x....:.:x..x:x......::...x.:...........:.......x:x..xx.x....xx:...:.x..:. 24M4I10M2D40M7I23M1D20M2D64M3I12M1D11M8D104M 199/308 64.6% 322/94230402 0.0% 28/308 9.1% 136001624 54212931 +3309 chr4 + 190214555 179592364 179592363 179592506 143 AACATATTTTTCCAGTCTTCTTTTATTTATAATGTTTTGATATTGTCTTTATTTCTGAAA--TTTAATTTTGCTGAATACAGAGATTTAGGTTGACAGCTCTCT-TCCTTCAGCACTTTCAAGATGCTCTTCTACTATATTCTGGC chr4 + 94230402 92949309 92949308 92949446 92949309 92949308 92949446 138 AATGCATCCTTCCCTCCTCCTTTTCTTAATAACGTGGTGATATTGTTTTCATTTCTAAAGTTTTTTTTTTTTCTAATAACAAGGA--------GAGAAACCTGTGTCCTACTGCATAATCAAGGTGACCATGTTTTATAATTTAGC ..:::..::....xx:..:.....x..x....:..xx.........:..:......:..:--...xx....x..:.xx...::..--------..x.:x:..x.-....x.x...:xx.....:..x:.x.x.x:....x.:.:.. 60M2I23M8D11M1I41M 89/135 65.9% 138/94230402 0.0% 11/135 8.1% 86643055 NA +3910 chr4 + 190214555 179604048 179604047 179604322 275 AAGGTTGTGAAAATATGATTGCAAGTCATAAAATATCTTAGCACCTAAAAT---------GTTCAAGCACTGAGCTATATCAAATTTTCAGGATCTGTCCTCAAATAATATGTAGAGGCATGTAAGTTGACAAAGAAAGAGAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAA---GAGACAGAAAGAAAGGAAAAAAGAAA---------------------------GAAA-----------------GAGAGAGAGGGAGGGAGGAAGGAGAAAAAAAGAAAGAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAA chr4 + 94230402 38078667 38078666 38078974 38078667 38078666 38078974 308 AAGAAAGTAAGAATATTGTTAGAAGTGACAAAATCACCTG----TTGAGATTTGGCTAGAGCTCAGGCCACAAGCATTAGGGAAAATATAAAACCTTTCCTCAAGTA---------TGCTCGTGAGT-----AAGAAAAAGGGAAAGAAAGAAAAAG---GGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAACCCATAAGCATGACCTACCTACTACTGCAAGTATGTGTTTTATTCTTGAGAGATATTAAGGGTAATAGAACAATAAGAGTAAGAAAGAA--GAGTAAGGAGCTGTGAAAGGGAAGAAAGGGGA ...:xx..:.:.....x:..:x....x.:.....xx.:.:----:.:.:..---------.:...:..xx::...xx..xx:..xx.x:.::.:..x.......:..---------x..x:..:...-----......:..:..........:....---.::......x.x...::.---.xx.....:.:..x........:...---------------------------.x..-----------------......x.xx:....x::x..:.x..x..:..x.........--::.x.:....xx:x...:.:.......::.:. 40M4D7M9I47M9D11M5D25M3D18M3I26M27I4M17I42M2D32M 168/252 66.7% 308/94230402 0.0% 79/252 31.3% 141525381 48689174 +3311 chr4 + 190214555 179604180 179604179 179604304 125 AGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAGACAGAAAGAAAGGAAAAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAGGAGAAAAAAAGAAAGAA---AGAAAGAGGGAGGGAGGGAG chr4 + 94230402 51148379 51148378 51148503 51148379 51148378 51148503 125 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAA---AAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGAG ........::..xx.x.:...:.:...:.........x...x:xxx....xx....x:::.x.x::..:.x.....::.---.::.....:..::.::..x..x.---x...:x.x.:...:...... 79M3D23M3I20M 78/122 63.9% 125/94230402 0.0% 6/122 4.9% 128455801 61758754 +3464 chr4 + 190214555 179604204 179604203 179604307 104 AGAAAGAAAGAAAGAGACA-GAAAGAAAGGAAAAAAGAAAGAAAGAGA----GAGAGGGAGGGAGGAAGGAGAAAAAAAGAAAGAAAGAAAGAGGGAGGGAGGGAGGAA chr4 + 94230402 15855381 15855380 15855489 15855381 15855380 15855489 109 AAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGGTTGGTGAAA .:.:...:....:x:....-......xxx.:.x..:xx...::.:...----.....:...:..:...:...:....:::x.:.......x..:::....xx..x.:.. 19M1I28M4I57M 69/104 66.3% 109/94230402 0.0% 5/104 4.8% 163748823 26465732 +3159 chr4 + 190214555 179604207 179604206 179604289 83 AAGAAAGAAAGAGACAGAAAGAAAGGAAAAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAGGAGAAAAAAAGAAAGAAAGAAA chr4 + 94230402 85790943 85790942 85791024 85790943 85790942 85791024 82 AAGAGAAGACTAGATTAAAAGAA-GAAAAAAAAAAGAAAAAAGAGGGGAGGGGGGCAAAGGGAGAACAGAACATGGGGAGAAA ....:.::.xx...:x:......-.:......:..::...:....:.::..:...x::.:......x.:..x.x:.::..... 23M1D59M 54/82 65.9% 82/94230402 0.0% 1/82 1.2% 93813264 NA +3123 chr4 + 190214555 179604267 179604266 179604317 51 GGAGAAAAAAAGAAAGAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAA chr4 + 94230402 10675422 10675421 10675472 10675422 10675421 10675472 51 GGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAA ...::..:.:......:..::...::..:......x...::.......... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 168928845 21285710 +3018 chr4 + 190214555 179604286 179604285 179604345 60 GAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAAA chr4 + 94230402 29014678 29014677 29014737 29014678 29014677 29014737 60 GAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ...:...xx.x::...:..:::.....:..:...:...:.....:.......:..x.:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 150589608 39624947 +4471 chr4 + 190214555 179679001 179679000 179679104 104 TGTATATATCTATATATGTGAGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATG chr4 + 94230402 21109194 21109193 21109297 21109194 21109193 21109297 104 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG .:..:..:.x.:.x.x....:.:....x.........x........:x:.....:x....:...:::..x:..::x.x...:.....:....::x.:..::... 104M 70/104 67.3% 104/94230402 0.0% 0/104 0.0% 158569807 31644748 +3801 chr4 + 190214555 179679052 179679051 179679191 140 GTATATATATGTACACA-CATATATATGTGTATATATATGTACACACATATATGTGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATGTGTATATATATGTACACACATATATGTGTATAT chr4 + 94230402 5214181 5214180 5214321 5214181 5214180 5214321 141 GTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..:.:x.....x:....-..xxx:.:::x..:.::x:...x:...:...x::......:::.x:.:.x.:......:..x..:......::..x..:.::::::.::.::x.::.:.:...:..::..x..:....:.:.. 17M1I123M 79/140 56.4% 141/94230402 0.0% 1/140 0.7% 174464871 15749684 +3072 chr4 + 190214555 179679061 179679060 179679115 55 TGTACACACATATATATGTGTATATATATGTACACACATATATGTGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ....::..:.:...:.::...:.:...:....:x.x...:..:............ 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 123984607 66229948 +3208 chr4 + 190214555 179679159 179679158 179679219 61 TGTATATATATGTACACACATATATGTGTATATATGTACACACATATATGTGTGTACATAT chr4 + 94230402 55694448 55694447 55694508 55694448 55694447 55694508 61 TGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ...x:x.:....:.:...:.:.:......:...:....:x.x...:..:.......:.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 123984711 66229844 +3042 chr4 + 190214555 179679197 179679196 179679254 58 CACACATATATGTGTGTACATATATGTACACACATATATATGTATATATATGTATACA chr4 + 94230402 22498238 22498237 22498295 22498238 22498237 22498295 58 CATAAATTTATGTCTCTATATACATGTATACACAAATATATGTAGTTTTATGTATGCA ..:.x..x.....x.x..:...:.....:.....x.........xx.x.......:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 157180959 33033596 +3069 chr4 + 190214555 179713306 179713305 179713394 89 CAATTTTCTAGAAA-TTTAATTTCCAACATTTGGATAAAAACATAATATAGGTAATTCCTTTTTTTTTTTTTTTTTTTTTTTTGAGATGG chr4 + 94230402 11541353 11541352 11541442 11541353 11541352 11541442 90 CAGCTTCCAAGAAAAGCTAACATCTGGCAAAAGGCTGAACACTCAATAGAGGGAATGCCTTTTCTTTTCTTTTTTTTTTTTCTTCCATGG ..::..:.x.....-x:...:x..:::..xxx..x.:..x..x:....x...x...x......:....:............:.xxx.... 14M1I75M 61/89 68.5% 90/94230402 0.0% 1/89 1.1% 168171953 22042602 +3058 chr4 + 190214555 179734168 179734167 179734215 48 CCATCTCAAAAAACAAACAAACAAACAAACAAACAAAACAAAACAAAA chr4 + 94230402 18196266 18196265 18196313 18196266 18196265 18196313 48 CCACCCTAAAAAACAAACAAACAAACAAAAAACCCTAACAAAACACAA ...:.::......................x..x.xx.........x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 161537902 28676653 +3098 chr4 + 190214555 179734630 179734629 179734685 56 TTTCTTTTTTTTTTCCTTTTTTTTGGGGGGGGTGGGGGGAGGAGGACAG-AGTTTCA chr4 + 94230402 76031460 76031459 76031516 76031460 76031459 76031516 57 TTCTTTTTTTTCTCTCTTTTTTTGGGGGGGGGGGGGGGGTGGCGGAAAGAAGCTTCA ..::.......:.::........x........x......x..x...x..-..:.... 49M1I7M 45/56 80.4% 57/94230402 0.0% 1/56 1.8% 103703170 86511385 +3031 chr4 + 190214555 179734631 179734630 179734668 38 TTCTTTTTTTTTTCCTTTTTTTTGGGGGGGGTGGGGGG chr4 + 94230402 76031460 76031459 76031497 76031460 76031459 76031497 38 TTCTTTTTTTTCTCTCTTTTTTTGGGGGGGGGGGGGGG ...........:..::...............x...... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 103703171 86511384 +3200 chr4 + 190214555 179746866 179746865 179746937 72 GCGCCTGTAACTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....::............::........x.xx.x...x::........::.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 103713660 86500895 +3053 chr4 + 190214555 179755578 179755577 179755736 159 AGATGGTAGATTAGCCAGACAATGAAGCCACATTCTCAGCCATTACTAGGGAAATGGCCATGAGGAAGCCAGATTAGATTCAAATTTGGCC-----ACTATCAGAAACGGTAGCCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGCAGAACCAGAAGAAATGATA chr4 + 94230402 70807789 70807788 70807928 70807789 70807788 70807928 140 AGACAGTAAATTGGAGAGATGTAGAAGTTTCCTTTGCAG---TAACTAAAGAAAGAG---------------------TTCAACTGTTACCTCAGAGCTCTCAGAGGCTGAGCTTAAAAAGGAAAGAAAAAAAAAGAAGAAAATCTAAAACAGAAGAGATGACA ...::...:...:.xx...::xx....::x.x..:x...---.x....::....x:.---------------------.....x.x.x:..-----:..x.....::.x.x:x::.....::...:.........:..:.:..x.x:..x.......:....:. 39M3D15M21D13M5I68M 88/135 65.2% 140/94230402 0.0% 29/135 21.5% 108947789 81266766 +3232 chr4 + 190214555 179774591 179774590 179774657 67 CTCTGCCTCAGGCAAT--GCTTTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTGTGTGTGTGTTTGTGC chr4 + 94230402 26578246 26578245 26578314 26578246 26578245 26578314 69 CTTTGCTCTTGGCAATCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTAC ..:...:::x......--:x...............:.....:.:.:.:.:.:x..:...:...:...:. 16M2I51M 48/67 71.6% 69/94230402 0.0% 2/67 3.0% 153196345 37018210 +3461 chr4 + 190214555 179796971 179796970 179797041 71 CGTGGTGCTGCACCCCTGTAGTCCCAGCTACATGGTAGGCTGAGGCAGGAGAATCACTTGAACCCAGAGGC chr4 + 94230402 76033197 76033196 76033265 76033197 76033196 76033265 69 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:::...x.....x--......:........x..:x........x.xx.x...x..............:.. 14M2D55M 54/69 78.3% 69/94230402 0.0% 2/69 2.9% 103763774 86450781 +3218 chr4 + 190214555 179797224 179797223 179797289 66 AAGAGAGAGAGAATGAGAGAGAGAGAAGGAAGAGGAAAAGGAAACAGAGGAGAAAAAGAGGAAGGG chr4 + 94230402 15855419 15855418 15855480 15855419 15855418 15855480 62 AAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGAC----AGGAAAGAACGAAAAAGGG ...:..:...xxxx..............:.............x----....:.:..x..::..... 43M4D19M 49/62 79.0% 62/94230402 0.0% 4/62 6.5% 163941805 26272750 +3177 chr4 + 190214555 179799496 179799495 179799569 74 GTGCAACTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACTTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....xx....:.::..........::........x.xx.x...x.:.......:::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 103766292 86448263 +3075 chr4 + 190214555 179805989 179805988 179806062 74 ACAGAGCGAGACTCTGTCT-----CAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAACAAAAAAAAAGAAAAAAAGAAAT chr4 + 94230402 38128953 38128952 38129031 38128953 38128952 38129031 79 ACACAATAAGATCATGTTTTGCAACTAGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAAT ...x.:::...::x...:.-----.x.:....:.x..x.:...x.....:.:....:...:..........x...:... 19M5I55M 53/74 71.6% 79/94230402 0.0% 5/74 6.8% 141677036 48537519 +3205 chr4 + 190214555 179815814 179815813 179815871 58 ATACATATTTATATATATACCATTTATATATATCATATATATATATATACACACACAC chr4 + 94230402 64918410 64918409 64918467 64918410 64918409 64918467 58 ATACGTGTTTGTATGTGTACACTTTATATACATTATGCATATATGTACACATACATGC ....:.:...:...:.:...xx........:..:..::......:..:...:...::. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 114897404 75317151 +3063 chr4 + 190214555 179815839 179815838 179815876 38 ATATATATCATATATATATATATACACACACACAAACA chr4 + 94230402 30834199 30834198 30834236 30834199 30834198 30834236 38 ATATGTATTATATATATATATATACACACACACACACA ....:...:.........................x... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 148981640 41232915 +3019 chr4 + 190214555 179815847 179815846 179815882 36 CATATATATATATATACACACACACAAACACACACA chr4 + 94230402 4409086 4409085 4409121 4409086 4409085 4409121 36 CATATATATATATATACACACACAGAGACACACACA ........................x.:......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 175406761 14807794 +3090 chr4 + 190214555 179829551 179829550 179829608 58 AATACATTTTTACTTTTTTTTTTTTTTTTTTTTTTGCTTCAGGGACAATCAACACTCT chr4 + 94230402 68165906 68165905 68165963 68165906 68165905 68165963 58 AAAATAATTACACTTTTTTTTTCTTTTTTTTTTTTGCCTCATATAAAATTAATACTTT ..x.:.x..x:...........:..............:...x:x.x...:..:...:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 111663645 78550910 +3042 chr4 + 190214555 179848200 179848199 179848245 46 TTTGTTTTTGTTCGTTTTTGTTTGTTTGTTTGTTTGTTTTCAGAGG chr4 + 94230402 34661521 34661520 34661566 34661521 34661520 34661566 46 TTTGGTTTTGTTTGTTTGTGTTTGTTTGTTTTTTTACTTTTGGAGG ....x.......:....x.............x...::...::.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 145186679 45027876 +3219 chr4 + 190214555 179857401 179857400 179857442 42 GAAGAAGAAGAAGAAGAAGAAGTTGCAAAAGAAACAGAAAAA chr4 + 94230402 12281883 12281882 12281924 12281883 12281882 12281924 42 GAGGAAGAAGAAGAGGAAGAAATTTCAAAAGAAACAAAAAAA ..:...........:......:..x...........:..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 167575518 22639037 +3005 chr4 + 190214555 179878478 179878477 179878531 54 CAAAAAAAAAAAAAATATATATATATATATACACATATATATATACATATATAT chr4 + 94230402 51472495 51472494 51472548 51472495 51472494 51472548 54 CACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATAT ..x...::......:..x.....:.......x...:.......:x:.:.:.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 128405983 61808572 +3053 chr4 + 190214555 179878479 179878478 179878524 46 AAAAAAAAAAAAAATATATATATATATATACACATATATATATACA chr4 + 94230402 1495010 1495009 1495055 1495010 1495009 1495055 46 AAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA .....x.:...............:.:..:.:.......x....:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 178383469 11831086 +3126 chr4 + 190214555 179878515 179878514 179878620 106 TATATATACATATATATATACACATATATATATACACATATATATACACATATATATACATATATATACACATA--TATACATACATATATACACATATATATACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:..:::.:.x.x.:.:x:.:...x.....::..x:.:......x.:.:..:x..:.::...:...x...:--.x.:::..:..:.:..::x....::..:..:. 74M2I32M 63/106 59.4% 108/94230402 0.0% 2/106 1.9% 158769321 31445234 +3046 chr4 + 190214555 179878547 179878546 179878655 109 TACACATATATATACACATATATATACATATATATACACATATATACATACATATATACACATATATATACATATATACACATATATATATACATATATATACACATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACAC ..:....:.:.:.x:x::.:x:::..:x.....:...x..:......x::::..:x..:..:...:..:x...::x.x::::.....:.:..::x....::.::..:.. 109M 60/109 55.0% 109/94230402 0.0% 0/109 0.0% 158769353 31445202 +3055 chr4 + 190214555 179878577 179878576 179878650 74 TATATACACATATATACATACATATATACACATATATATACATATATACACATATATATATACATATATATACA chr4 + 94230402 39937175 39937174 39937248 39937175 39937174 39937248 74 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA ......:.::.:.:...:.:x:.:.:...xxx.x..:....xxx:.........:...........x..:.:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 139941402 50273153 +3751 chr4 + 190214555 179878590 179878589 179878703 114 ATACATACATATATACACATATATATACATATATACACATATATATATACATATATAT-ACACATACATATATACATATATATACATATATACATATATATACATATATATACAT chr4 + 94230402 56938584 56938583 56938697 56938584 56938583 56938697 114 ACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATAACAGATAC-TGTATTCATTATTCTGTACATGCAGATGTATATGCATATAAAAGCAT .:.....x......xx.x.....x..:x......:.x:x.....:...x..x......-...x....-.:...x...xxx.x.::.:..::.x..:.....:......x.x:... 58M1I8M1D47M 80/113 70.8% 114/94230402 0.0% 2/113 1.8% 122940006 67274549 +3443 chr4 + 190214555 179878603 179878602 179878710 108 TACACATATATATACATATATACACATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACATATATATACATATATACA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..:....:.:.:.x:x.:.:x:.::..x.....:...x:.:......x.:.::.:x.....:...:..:x...::x.x::.:.....:::...:x...:::..::... 108M 63/108 58.3% 108/94230402 0.0% 0/108 0.0% 158769409 31445146 +3153 chr4 + 190214555 179878614 179878613 179878694 81 ATACATATATACACATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACATA chr4 + 94230402 76376858 76376857 76376938 76376858 76376857 76376938 81 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ..:....:x.x:x:.:....::.x.x...:..:..::......x.xx...x.:.:.........:.:......x.:.x... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 103501756 86712799 +3156 chr4 + 190214555 179878627 179878626 179878711 85 CATATATATATACATA----TATATACACATACATATATACATATATATACATATATACATATATATACATATATATACATATATACAT chr4 + 94230402 29286191 29286190 29286279 29286191 29286190 29286279 89 CATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTATGT ......:...:..::.----:.......x...x.x.x.....xx:x:.:.x............x.:..:x...x.....:...x..::. 16M4I69M 60/85 70.6% 89/94230402 0.0% 4/85 4.7% 150592436 39622119 +3117 chr4 + 190214555 179878750 179878749 179878829 80 ATATACATATATACATACATATATACATATATACACATA------CATATATACATATATATACGTACATATATATACATATATAT chr4 + 94230402 29286192 29286191 29286277 29286192 29286191 29286277 86 ATATACATACACGCAGAGGCATATACAGATAAAAAGATACAATCTCACAGATATATACATATCTGTATCTATTTATACGTATCTAT .........:.::..x.x::.......x...x.x.x...------..:.x...:...:....x:...:x...x.....:...x... 39M6I41M 58/80 72.5% 86/94230402 0.0% 6/80 7.5% 150592558 39621997 +3530 chr4 + 190214555 179878778 179878777 179878892 115 ATATACACATACATATATACATATATATACGTACATATATATACATATATATACACATACATATATATACATACATACATATATATATATATATATATATATATATATATATATA chr4 + 94230402 21109187 21109186 21109301 21109187 21109186 21109301 115 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ..x.:.x:......:.:.::x.x.:.:x:....:x.....:...x:.:......x.:.::.:x....:::..::.:x...::x.x.:.:.....:.:...:x....::..::.:. 115M 67/115 58.3% 115/94230402 0.0% 0/115 0.0% 158769591 31444964 +3253 chr4 + 190214555 179905575 179905574 179905630 56 GAGAGGAGGGAGAGGGGAAGAAAGGAAGGGAGAAAGGAAAAAAGAAATAAAGAAGT chr4 + 94230402 59767334 59767333 59767389 59767334 59767333 59767389 56 GAGGAGTGGGGGGGGGGGGGGGATGAGAAAAGAAAAGAAAAAAGAAATAAAGAAGT ...::.x...:.:....::.::.x..::::.....:.................... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 120138241 70076314 +3075 chr4 + 190214555 179906556 179906555 179906650 95 ATTCTGGTAATAAATATTTCTGAAGGCAGGCTTGCTTGCTTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 36924260 36924259 36924347 36924260 36924259 36924347 88 ACTCTGCTGGCATATAT-------GGCATGTTGATTTGCTTTCCTGTCTTTGTCTCTTTATTTTTTTCCTCCTCCTCTTTCTCCTCTGTTTATTT .:....x.:::.x....-------....x.:.x::.......:..x...:.x.:.....x...:....:.:..::::..::.:..:.x...x... 17M7D71M 58/88 65.9% 88/94230402 0.0% 7/88 8.0% 142982296 47232259 +3615 chr4 + 190214555 179906582 179906581 179906712 131 CAGGCTTGCTTGCTTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTTTTATTTTTTTTGAGA chr4 + 94230402 63697113 63697112 63697243 63697113 63697112 63697243 131 CAGACTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGA ...:...xx..x..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:::..:.x:xx.:::.::..:..:.:..:.:......::x....x...:... 131M 76/131 58.0% 131/94230402 0.0% 0/131 0.0% 116209469 74005086 +5194 chr4 + 190214555 179906605 179906604 179906707 103 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTTTTATTTTTTT chr4 + 94230402 27163692 27163691 27163794 27163692 27163691 27163794 103 CTCACTATTACTCTACTCCTTTTTATTTTTTCTTTTCTGTTTTTAGTTTTCCTTCTTCCTTCCTTCCTCCctttctttctttctttctttcttttctttcttt ...x:.x..x..:.x:.:....:.x.:...::..:.:.x...:.xx:....:................:....:...:....:.:.:........x...:... 103M 74/103 71.8% 103/94230402 0.0% 0/103 0.0% 152742913 37471642 +3210 chr4 + 190214555 179906637 179906636 179906697 61 TTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTT chr4 + 94230402 73754472 73754471 73754532 73754472 73754471 73754532 61 TTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTTTT ...:..:.x.x..:..x.x.x.......x....x........:..::.....:.....:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 106152165 84062390 +3150 chr4 + 190214555 179906641 179906640 179906699 59 TTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTTTT chr4 + 94230402 73754472 73754471 73754530 73754472 73754471 73754530 59 TTCCTTTTATGTTCCTGTATGTCTTCCTACCTTACTTCCTTCTTTTTTTTTTTTTTTTT ...:..:.x.x..:..x.x.x:......x....x........:.....:.....:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 106152169 84062386 +3518 chr4 + 190214555 179908135 179908134 179908206 72 GCACCTGTAGTCCCACCTACTTGGGAGGCTGAGGCAGGACAATCGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...x.......::........x.xx.xx..x.:...........:..x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 103874929 86339626 +3068 chr4 + 190214555 179913864 179913863 179913969 106 TGATATTTTTTTCTCTTTCTTTCTCCTTTTTTGCTTTCTCCACTCCTTCCCTCTCTCCTCCTTCTCTCTTACCTTCAAATGTTCAACTCTCTCGTCCTTCTCTGTG chr4 + 94230402 48874894 48874893 48874999 48874894 48874893 48874999 106 TGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTTAACAGTG ...xx:...x..:..:..:.x......x:..xx......::.:::x..x.:..::..::::x.:.:::...:....x...:..:.xx.....:x:....xx.x... 106M 63/106 59.4% 106/94230402 0.0% 0/106 0.0% 131038970 59175585 +3243 chr4 + 190214555 179914838 179914837 179914897 60 TGCGCCTGTAATCCCAGCTACGTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:.x....:.:........x..::........x.xx.x...x..........::.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 103881633 86332922 +3354 chr4 + 190214555 179967108 179967107 179967188 81 GCAACATAATGAGACACAAAAAAAGAAAAAACAAACAGAAAAAAGACAAAAAAACCCCATATGCTGCAGCACACATGAATA chr4 + 94230402 78351035 78351034 78351112 78351035 78351034 78351112 78 GCAAAATACAGAGGTACTGTAAAAGAAAAAACAAACAAAAAACAAACAAAAAACCACTAAAGGTTAAAGCA---ATGGATA ....x...xx...::..x:x.................:....x.:........x.x.:.x.x.:.:x....---...:... 71M3D7M 58/78 74.4% 78/94230402 0.0% 3/78 3.8% 101616073 88598482 +3373 chr4 + 190214555 179995959 179995958 179996019 61 GTGCACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGAGAATAGCTTGAACACAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:..........:::........x.xx.x...xx:.......x...:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 103962755 86251800 +3964 chr4 + 190214555 180034632 180034631 180034725 94 AGGGAGGAAGGGAAGGAGGGAGAGAGGGAGGGAGGGAGGAAAGGTTGGAAGGGAGGGAGGGAGGAAATGTTGGAAGGAAGG--GAGGGAGGAAGGG chr4 + 94230402 34776226 34776225 34776321 34776226 34776225 34776321 96 AAGGGGGAGGGCAAGGATGGAGAGGTGGAAGCTGGAAGGAGTAGGTGGAATAGAAAGTAGGAGCAGATTTTGGAAGAATAGAAGAGAGAGGAAGGG .:..:...:..x.....x......:x...:.xx..:....:x:.x.....x:..::.x:....x.:..x.......:.x:.--...:......... 81M2I13M 66/94 70.2% 96/94230402 0.0% 2/94 2.1% 145258406 44956149 +3086 chr4 + 190214555 180081522 180081521 180081584 63 TTTCCATGGGAGGACTCTAAGTCTTTCAAGAACTGGAACACATTTATTTATTTTTTAATTGTC chr4 + 94230402 52130671 52130670 52130733 52130671 52130670 52130733 63 TTTCCATGGAAGAAATCTATGTGTTTTAAGAAATAGAATAATTTGACTTTTTTTTTTATTGCC .........:..:.x....x..x...:.....x.:...:.xx..x.:..x......x....:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 127950851 62263704 +3092 chr4 + 190214555 180095426 180095425 180095495 70 CCTGGGTGACAGAAGGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACAGA chr4 + 94230402 32176682 32176681 32176751 32176682 32176681 32176751 70 CCTATGTGACAGAACAGAACATGGCTTTGATAAGAAAATGCAGGGAAAAAAAAAAAAAAAAAAGGACAGA ...:x.........x:::..x:x.::.::.x..:....x:x.:::...................x..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 147918744 42295811 +3178 chr4 + 190214555 180109020 180109019 180109117 98 GTTCTACA-AGTTTATATTTGTGTGTGTACGTGTGTGTGTGTGTGGAGAGAGAGAGAGATGTA----------------ATCTGTAGACATAGGCATGGTGAGGTAAATAAATTG chr4 + 94230402 49681664 49681663 49681778 49681664 49681663 49681778 115 GTTGTACACATTTTATATAAATATATATGCGTGTGTGTGTCTGTATAGAGAGAGAGAGATTTACACAGTGATTAGATATATTTGAAAAAATAGGGTTTGCAAGCTAGCTCAGTTG ...x....-.x.......xx:.:.:.:.:...........x...:x..............x..----------------..:..x.:.x.....xx.x.::..x..:x.x.:... 8M1I54M16I36M 71/98 72.4% 115/94230402 0.0% 17/98 17.3% 130427356 59787199 +3424 chr4 + 190214555 180114880 180114879 180114946 67 TGTGTGTGTGTATATATATATATGTGTGTGTGCATGTGTGTGTATATACACATACATATACCTATAT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:...:..:::..x:.......x...:.:....:.............:x.::..::.:..:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 93480956 NA +3640 chr4 + 190214555 180114886 180114885 180114946 61 TGTGTATATATATATATGTGTGTGTGCATGTGTGTGTATATACACATACATATACCTATAT chr4 + 94230402 89748651 89748650 89748711 89748651 89748650 89748711 61 TGTGTACATATATGTTAGAGTATGTGAATGTGTATGTTTGTGCACATACACACACCTATAT ......:......:.xx.x..:....x......:...x.:.:........:.:........ 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 90366235 NA +3260 chr4 + 190214555 180153272 180153271 180153386 115 GATTGAAATAAAACTGCAGTGTATATATATATATATATATATATATATATATATATATATATATATATAGTGTGTATATATATATAGTGTATACACACACACACACACACACACA chr4 + 94230402 73857019 73857018 73857109 73857019 73857018 73857109 91 GATTGAA-------TACAGTGAATATTTATA---------------GTGAATATGTGAATATATGTGTAATATATATAGATGCAT--TATATACACACGTACACACACATACTCA .......-------.:.....x....x....---------------:.:x....:.:x......:.:..:.:.:....x..::..--.:.........::.........:..x.. 7M7D17M15D39M2D28M 69/91 75.8% 91/94230402 0.0% 24/91 26.4% 106296253 83918302 +3278 chr4 + 190214555 180204137 180204136 180204208 72 GCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAAACCAGGAGGTGGAGGTTGGAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.::..........::........x.xx.x...x::......x....:..x.xx:..:..x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 104170931 86043624 +3926 chr4 + 190214555 180244823 180244822 180245027 205 CTTCAATCTCTTA---TATTTGACCTGTCATTTATAGGTCTCTGGTTTCTTCCTTTTTCCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCT-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTT--CTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCT chr4 + 94230402 19215369 19215368 19215566 19215369 19215368 19215566 198 CTTTCATCTTTTAGCGTATTCTCCCTGGCACCCGCAA-----------CCCCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCT--CCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCTCTGTCTCT ...:x....:...---....:xx....x..:::::.:-----------.::..:::.:..::.:::.....:...:...:xx....xx.x-......x..::...x......xxx....x.x....--.:xx.......:.x.:.:.:..x.:x.:....xxxx...:::..--...:.....x:...x.x.:.....x.:..:.x.:... 13M3I21M11D42M1I35M2D44M2I37M 121/192 63.0% 198/94230402 0.0% 19/192 9.9% 161029454 29185101 +3627 chr4 + 190214555 180244866 180244865 180245159 294 TTCTTCCTTTTTCCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTT-----TTCTT-------TCTTTC-------TTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTT---TCTTTCTT------TCCTTTCTTTCTT------TCTTTCT---------TTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTT chr4 + 94230402 62204785 62204784 62205112 62204785 62204784 62205112 328 TTCTTCCTTTGTCTTCCTTTCTTCTTTTTCTCTCCTTTTATTCTGT---------TTTGTGTGTATGTGTTTTGTGGGTCTTTTTAATCATCCCCTCACCCTATCTCAGAGGTACCTGGAACAATATGTCAGACAAGTGTTGTAGCAGCATGTTTCCTCTTAATAACACACCTTGCATCTTGCATATAAAATCCCTTTCTCCTGGAAGAATCTTTGTAATACCCAATTAGACCTCGTGACTTTTCTACCTTTCTCTTTTCCTCTTGTtctctctctccttctctccctttttccttttctccctcccacccttcctccttctctTTCCCCTGATCTT ..........x..:.:.......:.:.....:......:x....x.---------...x.x.x.x.x.x.:..x:xxx.:.:...xx..x.:.::..x::..x...:-----.x.:.-------.x.x..-------.x.:x.xx:xx:x.x....:....xx.xx.x:x:...---....x.x.------...:..::.:..x------.....x.---------..xxx:..:x.xx.:.....x:......:.:..:..:.:x....:...:..:....:..::.:....:..:.:..::..::x.::.::...:....:.:.::.::xx.... 46M9D52M5I5M7I6M7I37M3I8M6I13M6I7M9I111M 174/285 61.1% 328/94230402 0.0% 52/285 18.2% 118040081 72174474 +4017 chr4 + 190214555 180244867 180244866 180244994 128 TCTTCCTTTTTCCTTCTTTCTTTTCTTTCTTT------CCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTCTTTCTTTCTTC----------------TTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTC chr4 + 94230402 50176266 50176265 50176415 50176266 50176265 50176415 150 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTC--TCCTCCATTCTTC .:...:x.:.:x..x..:..:......:....------..x:.:..x.x..x..::..::x......--x..:x...:.x................----------------...::..x.:..:............--..:.:.x...... 32M6I29M2I27M16I25M2D13M 92/126 73.0% 150/94230402 0.0% 26/126 20.6% 130068601 60145954 +3107 chr4 + 190214555 180244874 180244873 180244960 87 TTTTCCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTT chr4 + 94230402 36195290 36195289 36195376 36195290 36195289 36195376 87 TTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTTAGCGTTTTT .....:.....x:........:........x...x...:xxx:..x..:x:..x...:.:..x:::.:.....:x..:xx.x..:.. 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 144049584 46164971 +3193 chr4 + 190214555 180244875 180244874 180244996 122 TTTCCTTCTTTCTTTTC---TTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT---TTTCTTTCTTCCTTTTTATTT ...x:.:..:..:....---.x.:..::....:....:.:x..::.:.x....xx.....x.:.:xxx.:.:.x::...::x.xx.......:..:::::.---..........:....:.x:.. 17M3I81M3D21M 74/119 62.2% 122/94230402 0.0% 6/119 5.0% 116547757 73666798 +3519 chr4 + 190214555 180244878 180244877 180244997 120 CCTTCTTTCTTTTCTTTC---TTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .:..x..:..:.:.....---.x.::.:.....:....:.:x..::.:.x....xx.....x.:.:xxx::.:.x::..:.:x.xx.......:..:::.....::..::...:..:..x... 18M3I102M 73/120 60.8% 123/94230402 0.0% 3/120 2.5% 116547761 73666794 +3923 chr4 + 190214555 180244880 180244879 180245007 128 TTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTT----------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTT-----------TCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ..:.:.x.:.:x:.x..:.........:....----------:...x:x.:x........x.::..:x.x:.:x...:.x...............-----------..:::x.......x::.:...::......::.:..::x..... 32M10I53M11I43M 85/128 66.4% 149/94230402 0.0% 21/128 16.4% 130068614 60145941 +3772 chr4 + 190214555 180244882 180244881 180245001 120 CTTTCTTTTCTTTCTTTCCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..::::.:......x---..:.:.....:....:.:x..::.:.x....xx.....x.::.xxx::.:.x....:.:x.xx.......:.:.::.....::..::...:.:...x... 20M3I100M 75/120 62.5% 123/94230402 0.0% 3/120 2.5% 116547765 73666790 +3300 chr4 + 190214555 180244883 180244882 180245040 158 TTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTC---TTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCT chr4 + 94230402 64726428 64726427 64726585 64726428 64726427 64726585 158 TTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATC---ATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT ..::.:...x.:....x..:.xxx.:..::xx.::..:x:...x.:::..x.xx...:xxx.x:......x...x:.x..---x...x.x...:x.:.:....:....:x.x---...:...:.:......:x...:.:.:.....:::.:.::.....:. 80M3D29M3I46M 92/155 59.4% 158/94230402 0.0% 6/155 3.9% 115518455 74696100 +3621 chr4 + 190214555 180244888 180244887 180245004 117 TTTCTTTCTTTCCTTTCT----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTT-TCTTTCTTTCTTTCTTTCTTCTTTCTTTCTT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...x..:..:.......:----..:.:.....:....:.:x..::.:.x....xx....:x.::.xxx:::..x....:.:x.xx.....-...::.:.::...........:..:..x:.. 18M4I68M1I31M 76/117 65.0% 122/94230402 0.0% 5/117 4.3% 116547770 73666785 +3608 chr4 + 190214555 180244889 180244888 180245027 139 TTCTTTCTTTCCTTTCTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTC--TTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCT chr4 + 94230402 52146249 52146248 52146394 52146249 52146248 52146394 146 TTCTCTCTTCCCTCCTTTTTTTTTTTTCCAGCATCTGATTCTCATTGTTCTTCTGTCAGTTCCTACACTCTTCCCTTTGCACACCATATGTGTCTTTTCTAGGCTTTTTCTTCTTTCTCTCTTCTCCACTTCTACTCCCTTTTGCT ....:....:...:::...:...:....-----.:.xx....:x:.x.::....x..--...:.x.x:.....::.:.x:x:x:.x.x:x.x.....::.xxx:.:............:......::x:....x:..::.:..x.. 28M5I24M2I87M 86/139 61.9% 146/94230402 0.0% 7/139 5.0% 128098640 62115915 +3236 chr4 + 190214555 180244898 180244897 180245034 137 TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTC-------TTTCTTTTCTTTCTTTCTTTCCTTT chr4 + 94230402 91420547 91420546 91420690 91420547 91420546 91420690 144 TCTTTTCTCTGCTGTATTCTGTTCTTCATTCTTTCTCTATTTCATGTGCGCCTTTTGCCTCTTACCTTCCTGCATCTCCCACATGGTTTATGCCTTCATTTTTATCCCTGTCAGTCAGACTTCTGTTGCTTCCTCCTCTCTTTT ..:.....:.x:.x:x....x.::...x........:.x....x.x.x:x::.:..x::....x.:...:.x.x.:..::x.x.xx...x.x:....x..:..x:::..x..-------:....x..x:...:.:..:..:... 112M7I25M 83/137 60.6% 144/94230402 0.0% 7/137 5.1% 88824351 NA +3330 chr4 + 190214555 180244898 180244897 180245034 137 TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTC-------TTTCTTTTCTTTCTTTCTTTCCTTT chr4 + 94230402 91429273 91429272 91429416 91429273 91429272 91429416 144 TCTTTTCTCTGCTGTATTCTGTTCTTCATTCTTTCTCTATTTCATGTGCTCCTTTTGCCTCTTACCTTCCTGCATCTCCCACATGGTTTATGCCTTCATTTTTATCCCTGTCAGTCAGACTTCTGTTGCTTCCTCCTCTCTTTT ..:.....:.x:.x:x....x.::...x........:.x....x.x.x::::.:..x::....x.:...:.x.x.:..::x.x.xx...x.x:....x..:..x:::..x..-------:....x..x:...:.:..:..:... 112M7I25M 83/137 60.6% 144/94230402 0.0% 7/137 5.1% 88815625 NA +3423 chr4 + 190214555 180244900 180244899 180245050 151 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 48010632 48010631 48010782 48010632 48010631 48010782 151 CTGCCTTCTTTTCTGCTGTACCTCCATTTTTTTTGTCTTTCTCCTTCACGTGGATTTTTTTTTTTACTAAATTCATATTTTCCCTTCCCAACTTTCCTAGTGCCTTTCCCTCTGTTTTCATTCTCTGTCTCCTTCTCATAGCTGTTTCTTT ..x:...::.....x::x.x.:.:.x..:...:.x.......:...:x:x.xxx:...:...:..x..xxx..:x:x..:.::...:.:xx...:::.xx.x.:.:.::..:.x.....x....:.x.:.....:::x.xx:.x....... 151M 86/151 57.0% 151/94230402 0.0% 0/151 0.0% 132234268 57980287 +3503 chr4 + 190214555 180244902 180244901 180245027 126 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTC-----TTTCTTCTTTCTTTCTTTTCTTTCTTTCT chr4 + 94230402 6297115 6297114 6297248 6297115 6297114 6297248 134 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTT .....:..---....xx:.......x:...x.x.x....:.x......xx::.x......:x:x.:.:.x...:..::.x:.x....:..x....:..:.-----x.....:x:x..xx.....:...:...:. 8M3I89M5I29M 83/126 65.9% 134/94230402 0.0% 8/126 6.3% 173947787 16266768 +3139 chr4 + 190214555 180244907 180244906 180245043 137 TCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTT-------CTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTC chr4 + 94230402 26784762 26784761 26784906 26784762 26784761 26784906 145 TCTTTCTTGTCTTTCCTCCTCTAATAGTGCATCTGCTCCTGGCGACAGTTTTATTCTGCTTAATGTTTCTCCATTTTTTTTTATTTCTCCTACTGAGCTGTATTATCCTCCTTTCCTCTCTTTCTTTCTTTATGTTCTCTTTTTC ........-......:.:..:.xx.xx.x:x.:.x:..:.x-------:...x....x::.xx:x..::.:.x...:...:.x.:.:..:.x..xxx:.x.x.:x..:.:.....:.:.............x:x....:.:.... 8M1I32M7I97M 85/137 62.0% 145/94230402 0.0% 8/137 5.8% 153460145 36754410 +3150 chr4 + 190214555 180244913 180244912 180244995 83 TTTCTTT---CTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCT chr4 + 94230402 61949704 61949703 61949789 61949704 61949703 61949789 86 TTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTT .......---..:.x:.x..x.x:.:.....x.x:.:.x.:...x..::..:.xx.x:...................:...:..:. 7M3I76M 58/83 69.9% 86/94230402 0.0% 3/83 3.6% 118295209 71919346 +4101 chr4 + 190214555 180244940 180244939 180245067 128 CTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTT--------------TCTTTCTTTCTTCTTTCCTTTC chr4 + 94230402 21408807 21408806 21408948 21408807 21408806 21408948 142 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTTTATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAACTATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC ...:.x.:..:...:..x..xx:.:.:.:.x....x.:.:........xxx..xx..:.:::.:..:.:.:.x.xxx::x..........:.........:::...--------------...x::.........x...... 106M14I22M 84/128 65.6% 142/94230402 0.0% 14/128 10.9% 158836133 31378422 +3489 chr4 + 190214555 180244941 180244940 180245060 120 TTCTTTCTTTCTTCTTTCTTTCTTTCTTTC---TTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTT chr4 + 94230402 82976631 82976630 82976750 82976631 82976630 82976750 120 TTCTGTCTGTCTTTTGTTTCTCCTACTTTTCCATCTGCTTTTTGTATGGCTCTCATCTCTCCTCTCTC---CTTTCCTTTTTCTGTCTGAGTCCCCTTTGTTATTCTTCCTTCATTTCTTCTT ....x...x....:.x.:.:..:.x....:---.:.x....:.x.x.xx..:..x...:..:.:::..---.....:...:.:.x.:.xxx...::.:.x.:x.....:...:x......... 30M3I35M3D52M 77/117 65.8% 120/94230402 0.0% 6/117 5.1% 97268310 92946245 +4050 chr4 + 190214555 180244962 180244961 180245084 123 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTT-----CCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTC---CGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCT--CTTTTCTTTCTTCCTTTTTATTT ....x..:..:.:.....---.xx.x...::.....:....:..x.....::x....xx.....x.:.-----.:..x....:.:x.xx.......:..::..--.:..........:....:.x.:. 18M3D47M5I30M2D23M 84/118 71.2% 123/94230402 0.0% 10/118 8.5% 116547845 73666710 +3169 chr4 + 190214555 180244974 180244973 180245112 139 TCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 4266730 4266729 4266868 4266730 4266729 4266868 139 TTTTCCTCTTCGATTTTTTGTTTTCTCTTTTCTTCCACAGCTGCCCTCCGTTGTTCGTCTTTCTGCTTTTGTTCTTTCAGCTTTCTCTGCCTTTCTTCTAACTGTTTCTCATACTGGAGTTTTGCTTTTCTCTCCTTTT .:..:..:.::xx:...:.x:.....:.:.....:.x:xx:.x:.:.:.x..x..:x::..::.x....:x.......xx::....:.x.:..::....xx..x.:.:..x.x..xxxx..:.x::.....:..:..:. 139M 78/139 56.1% 139/94230402 0.0% 0/139 0.0% 175978244 14236311 +3276 chr4 + 190214555 180244983 180244982 180245082 100 CTTTCTTTCTTCTTTCTT-TCTTC---------TTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTT chr4 + 94230402 36195258 36195257 36195367 36195258 36195257 36195367 110 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTTT .....:...x.x...:.:-.....---------..........x.:.......:........x...x...:xxx:..x..:x:..x:....:..x:::.:.::...x... 18M1I5M9I77M 70/100 70.0% 110/94230402 0.0% 10/100 10.0% 144049725 46164830 +3179 chr4 + 190214555 180244995 180244994 180245099 105 TTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 + 94230402 32895598 32895597 32895702 32895598 32895597 32895702 105 TCTGTCTCCTCTTTCTTCCTATTTTTTCCTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTC .:.x.:..:........:..x..:....:.x::x.:..:.x.x.:..::x:.xx....x..xx.x.::.:.:x::.:.:...x:.x......x.....:...... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 147349397 42865158 +4387 chr4 + 190214555 180245018 180245017 180245140 123 CTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:.......:xx:x..:.:.....:....:..x...:.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:.x.:. 123M 78/123 63.4% 123/94230402 0.0% 0/123 0.0% 116547901 73666654 +3208 chr4 + 190214555 180245027 180245026 180245108 82 TTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ...:....::..x.::..x..:.:...::::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 122872999 67341556 +3380 chr4 + 190214555 180245031 180245030 180245156 126 CTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCT---CTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx.x.:....---....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::.:........:....:.x.:. 29M3D94M 74/123 60.2% 123/94230402 0.0% 3/123 2.4% 116547914 73666641 +3381 chr4 + 190214555 180245032 180245031 180245112 81 TTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .......::..x.::..x..:.:.....::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 122873003 67341552 +3188 chr4 + 190214555 180245034 180245033 180245116 83 TCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:..:...:::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 122873007 67341548 +3511 chr4 + 190214555 180245035 180245034 180245160 126 CTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..---.....:xx.x.::.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.::::..........:..:.:.x... 13M3D110M 75/123 61.0% 123/94230402 0.0% 3/123 2.4% 116547918 73666637 +3583 chr4 + 190214555 180245043 180245042 180245164 122 CTTTCTTTCTTTCTTCTTTCCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTC--CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..--......x---..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:....:.:.::.........::..:...x.:. 13M2D7M3I100M 77/120 64.2% 123/94230402 0.0% 5/120 4.2% 116547926 73666629 +3077 chr4 + 190214555 180245046 180245045 180245128 83 TCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::.:x.:...x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 122873019 67341536 +3696 chr4 + 190214555 180245052 180245051 180245166 115 TTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCTTT chr4 + 94230402 63697119 63697118 63697239 63697119 63697118 63697239 121 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..x:.:..:.......:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx..........:::::..:.:.:...::....:.x... 63M6I52M 73/115 63.5% 121/94230402 0.0% 6/115 5.2% 116547933 73666622 +3415 chr4 + 190214555 180245056 180245055 180245166 111 TTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCTTT chr4 + 94230402 63697119 63697118 63697235 63697119 63697118 63697235 117 TTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..x..:.::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.------:..x....:.:x.xx...:...:..:::::..:...:....:..:... 63M6I48M 69/111 62.2% 117/94230402 0.0% 6/111 5.4% 116547937 73666618 +3128 chr4 + 190214555 180245064 180245063 180245144 81 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x..... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 122873035 67341520 +3086 chr4 + 190214555 180245082 180245081 180245164 83 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.............::...x.....x:.xx..x.:... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 122873055 67341500 +3046 chr4 + 190214555 180275367 180275366 180275436 70 AAAAAAGAAAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 + 94230402 48632621 48632620 48632690 48632621 48632620 48632690 70 AATACAGAAAGCAGAAAGGAAAGATAAGGGAAAAGAGGGAATGGAAGGAAGTGGAAGAACGAAAAAGAGA ..x.x.....:x.....:......x...::..:.:.:.:..x.:..:...:x::.....x::......:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 131642746 58571809 +3037 chr4 + 190214555 180287725 180287724 180287820 96 GTATCTCGAAAATTAAAATAAAATTAACTTAAAAATAAAATAAAATTCACTAATGTAATAGAAAAAAAGAATATAAATTGCATTGACATACATTCA chr4 + 94230402 60073855 60073854 60073950 60073855 60073854 60073950 96 GTGTTTTGCAAGAAAAAATGTAAGCATCTTAAAGATAAAATATTGTGTACTTCTATAAAAAGCAAAGAGTATGTAATTTGTATTGTCACACGGTTA ..:.:.:.x..:xx.....:x..x:.x......:........xx:.x:...xx.:...x.::x...:..x..:...x...:....x..:..:x.:. 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 120213870 70000685 +3049 chr4 + 190214555 180289961 180289960 180290037 77 GTTTGTGTGTACATATGTGTGTGTGTGTGTGTGTGTGTGTATACACACATATATATGCATATATATGTAAATGGATG chr4 + 94230402 39937168 39937167 39937244 39937168 39937167 39937244 77 GTTTTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATG ....xxx.:..:..........::...x......::xxx.x....:..xxx:...::....:....:..x..:.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 140352793 49861762 +3144 chr4 + 190214555 180289985 180289984 180290029 45 GTGTGTGTGTGTGTGTATACACACATATATATGCATATATATGTA chr4 + 94230402 68837095 68837094 68837139 68837095 68837094 68837139 45 GTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCA .....:..........:........x...:..:....:.:...:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 111452890 78761665 +3002 chr4 + 190214555 180311004 180311003 180311062 59 CTATTTTTTGTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTTTTAGTAGAGACAAAG chr4 + 94230402 59545160 59545159 59545218 59545160 59545159 59545218 59 CTGTTTTTTGTTTTTGTTTCTTTGTTTGTTTTCCAATTTTGTCAATAAAAAGGACAAAG ..:................x............:xxx....x.:xx..:x.::....... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 120765844 69448711 +3617 chr4 + 190214555 180313009 180313008 180313078 70 ATTTTTGTTTTATCATATATATGTATATATGTACATATGTGTGTGCATATATGTATACCTGTATTTATAA chr4 + 94230402 48270728 48270727 48270797 48270728 48270727 48270797 70 ATCTCTTTCCTGTTATAAATATGTATACATGTACATATTTGTGTGCATGCATATATGCTTGAAGTCAGAA ..:.:.x.::.:.:...x.........:..........x.........::..:...:.:..x.x.:.x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 132042281 58172274 +3040 chr4 + 190214555 180321391 180321390 180321453 63 ATTCCTGGTGAAACTGCAGTTTCTCTAACATCCCTGATTTTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 35428414 35428413 35428476 35428414 35428413 35428476 63 ATTTCTGGTTAGACTGATGTACCTCATAAATCTTTATTTTTCTTCTTTTTTTTTTTTTTTAAG ...:.....x.:....xx..x:...xx.x...::.:x....:..:...............:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 144892977 45321578 +3445 chr4 + 190214555 180327329 180327328 180327398 70 CATGGTGGCGGGCACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x....:.:...........::........x.xx.x...x.:.........x.:.. 10M2D58M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 104294132 85920423 +3457 chr4 + 190214555 180329587 180329586 180329675 89 TATATATGCATATATATACACACGTATATATATATACACATGTGTATATATGTATATACATACGTGTGTGCATATATATGTGTATATAT chr4 + 94230402 5214233 5214232 5214321 5214233 5214232 5214321 89 TGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT .:.:.::...x:.:.x.:.....::..x..::.:..::...x..:..:.:...::::.x.:::..........::.x......::.:.. 89M 54/89 60.7% 89/94230402 0.0% 0/89 0.0% 175115354 15099201 +3234 chr4 + 190214555 180329610 180329609 180329663 54 GTATATATATATACACATGTGTATATATGTATATACATACGTGTGTGCATATAT chr4 + 94230402 55694455 55694454 55694508 55694455 55694454 55694508 54 GTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT ....::...:............:...:.....x:x...::::.....:...... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 124635155 65579400 +3189 chr4 + 190214555 180331258 180331257 180331360 103 CAAGTATATAGGAAAAATATGTAAA-AACATATGTATATATGTGTGTGTGTGTATATGTGTATATACACACACACACATTTTCTTTCAGCATTTTTTCTATTTT chr4 + 94230402 29797112 29797111 29797208 29797112 29797111 29797208 97 CAACTACGTCAGAAATTTCTGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTT-------TGCTTTTTCTACGTT ...x..::.x:....xx.x..:.x.-::....::..::....:......:...:..x:.:............x.x.x.....-------:::........:x.. 25M1I56M7D15M 66/96 68.8% 97/94230402 0.0% 8/96 8.3% 150534146 39680409 +3035 chr4 + 190214555 180348858 180348857 180348938 81 TGTGTATATTTATGAGATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTTGAGTCTTGCT chr4 + 94230402 84733223 84733222 84733303 84733223 84733222 84733303 81 TGTGTGTATAGGTTAAATTGGTCTGTTTTCTTTTTGTCATTTCAGTTTCTCTTTTTTTTTTTTTCTAGTTAAATTCTTACT .....:...xx:.x.:..xxx.:.x....:.....x.:x...:xx...:.:.............:x....x:.x....:.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 95615635 NA +3217 chr4 + 190214555 180348858 180348857 180348922 65 TGTGTATATTTATGAGATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 63990384 63990383 63990448 63990384 63990383 63990448 65 TATATGTACTTATGAAATACTCATTTTCTCTTTCTTATTCTTTTTTTTTCTTCTATCTTCCTTCT .:.:.:..:......:..:..:x....:.:...:..x..:.........:..:.x.:..::..:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 116358474 73856081 +4099 chr4 + 190214555 180357985 180357984 180358138 154 CAATGTGGAGACTAAATGTATCACAATCACATAGATGGGATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATATATATGTGTATG--TATACATACACA chr4 + 94230402 21109151 21109150 21109301 21109151 21109150 21109301 151 CGGTGTATGGGCTGAGCGTATCTGAAAAATA-----AGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .::...:x:.:..:.::.....xx..xx.:.-----:...x..x.::x....:..:.....x.x....x.:..:.x.:..::...x:.:...:..x.:.:..:x.:.:...:.:.::x::.::x.x::.:............--...:...:.... 31M5D106M2I12M 91/149 61.1% 151/94230402 0.0% 7/149 4.7% 159248834 30965721 +3126 chr4 + 190214555 180357997 180357996 180358102 106 TAAATGTATCACAATCACATAGATGGGATATATATATATATATATGTGTGTGTGTGTGTGTGT--GTGTACATA----CATATATACACACATATATATGTGCGTGTATGTG chr4 + 94230402 39937141 39937140 39937252 39937141 39937140 39937252 112 TAAGTGCCTTTTAACCTGATAATTTGGGTTTTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCATTTG ...:..:x.:x:..:.xx...:x.x..:.x.xxx.........:.....::...x......::--x.x......----....:.:.:...:.....:..:x::...:..x.. 63M2I9M4I34M 70/106 66.0% 112/94230402 0.0% 6/106 5.7% 140420856 49793699 +3398 chr4 + 190214555 180358018 180358017 180358082 65 GATGGGATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACA chr4 + 94230402 27325499 27325498 27325563 27325499 27325498 27325563 65 GATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATGAAAACA ...x.x...:.:x.:x.:x..x..:...........:...........:.........:x.x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 153032519 37182036 +3183 chr4 + 190214555 180358024 180358023 180358098 75 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTA chr4 + 94230402 85834534 85834533 85834608 85834534 85834533 85834608 75 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ..x:..x.:.:.x.:.:.............:.xx:...:x:.........:..x.:....:.x....::.:::.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 94523490 NA +3168 chr4 + 190214555 180358031 180358030 180358113 83 TATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.:...x.................:.xx..::.x::.....:.::..x...::..:x.:.:::::::..:.:.... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 94523498 NA +3256 chr4 + 190214555 180358033 180358032 180358176 144 TATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGT-----ATGTGTGTATATACATATA-TATGTGTATGTATACATACACATATATATGTATATACACACATACACGCACATATATACA chr4 + 94230402 79265520 79265519 79265668 79265520 79265519 79265668 149 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCA-GCACTTGTATTTATACA .:.:.:.:....::........xx...:.:........::.:.:.....::.x.:..:.x:....-----.:::x.x......x..::.-.x..:x.x.x.:x:::....x..::..x.x.:..x:::.x..-:...x:::..x...... 65M5I19M1I42M1D17M 87/143 60.8% 149/94230402 0.0% 7/143 4.9% 101092513 89122042 +3543 chr4 + 190214555 180358033 180358032 180358115 83 TATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x..................:xx.::..x::.:...:..:..x..::::..x....:::::...:...:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 94523500 NA +3742 chr4 + 190214555 180358035 180358034 180358161 127 TATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACACATAC chr4 + 94230402 21109194 21109193 21109302 21109194 21109193 21109302 109 TATACATGTGTGTCTCTGTGGGCGTATTT------ATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTAT------------ATGTGTATGAATATGCATGCACAC ....:........x.x....x.:..:.x.------....:...x........:x:...:::x...::..:.:..:x...::x.x.......------------..:.:....x....:..::..:.. 29M6D56M12D24M 76/109 69.7% 109/94230402 0.0% 18/109 16.5% 159248841 30965714 +3927 chr4 + 190214555 180358035 180358034 180358117 83 TATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x...............::..xx..:..x:..:......:..x:.:.:...x.:..:::.:.....:.:.. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 94523502 NA +3154 chr4 + 190214555 180358041 180358040 180358128 88 TGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATAT-ACATATATATGTGTATGTA chr4 + 94230402 79265520 79265519 79265608 79265520 79265519 79265608 89 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCA ............::........xx::..:...:......:::.::.:.:.::x:::...x.....x:.:-...:x.x...:.:x...:. 69M1I19M 56/88 63.6% 89/94230402 0.0% 1/88 1.1% 101092521 89122034 +3286 chr4 + 190214555 180358101 180358100 180358163 63 TGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACACATACAC chr4 + 94230402 47135177 47135176 47135239 47135177 47135176 47135239 63 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACAC .........:....:.:...x:.xx..x..::....::...:.:....:.:......::.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 133222924 56991631 +3853 chr4 + 190214555 180365563 180365562 180365699 137 AACCAAAGGGCCCAATATAATTTTATACACACACACATACACATATGTATACATATGTAAAATATATATGTATATATGTATATGCATATACATATACATATATACATATATACATACATATATGTATATAATATATA chr4 + 94230402 83540933 83540932 83541067 83540933 83540932 83541067 135 AACCCACTGATATAGCATGATTATGTACATTGCAGTAAATGAATATATATAATCATAGAAAATACATATTTTTTTATGTGT--GCAGGCACATATGCATATAAACTGAGATACATATTCATATATATTTAGTATGTA ....x.xx.::x:.::..:...x.:....:xxxx::.x.::x....:....xx:..:x......:....x.x.x.....:.--...x::......:......x..xx.x.......:x:....:...x..:...:.. 81M2D54M 86/135 63.7% 135/94230402 0.0% 2/135 1.5% 96824630 93389925 +3695 chr4 + 190214555 180390173 180390172 180390332 160 TAATATTCTTTCAT---GCTCTGGTTTTTAAAATAAA--------CAACATCTTT----------TATATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATATTTATATATATATTTATATATATATTTATATA chr4 + 94230402 56938520 56938519 56938690 56938520 56938519 56938690 171 TAATATCTTTCCCTATAGCACCTATTTCTCAAATAAAGGCTCTGTCATCACCTTTGTTTGCACCACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA---ACAGATAC-------TGTATTCATTATTCTGTACATGCAGATGTATATGCATATA ......::..:.x.---..x.:x:...:.x.......--------..x..:....----------:.:...x.......x.x.....x..xx......::..x.....:....:.x.......---.:.x...:-------.:...x:...xx.x.:..:..x:.x..:.....x:..... 14M3I20M8I10M10I58M3D8M7D40M 107/150 71.3% 171/94230402 0.0% 31/150 20.7% 123451653 66762902 +4047 chr4 + 190214555 180390238 180390237 180390401 164 ATATTTATATATATTTATATATATATTTATATATATATTTATATA-TATATTTATATATAT------ATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTA-TATATAT chr4 + 94230402 83540902 83540901 83541068 83540902 83540901 83541068 167 ACATTTAAAATTACATGAATATAGACACACAAACCCACTGATATAGCATGATTATGTACATTGCAGTAAATGAATATATATAATCATAGAAA-----ATACATATTTTTTTATGTGTGCAGGCACATATGCATATAAACTGAGATACATATTCATATATATTTAGTATGTAT .:.....x.xx..:x.:x.....x.:x:.:.x.:x:.:.x.....-:..:x....:..:..------.x..xx.........x.:...x.x.-----...:......x.x...:.:.x:.x::.:....x:.....x.:.x.x...:.....:...........-...:... 45M1I15M6I25M5D67M1I7M 108/159 67.9% 167/94230402 0.0% 13/159 8.2% 96849336 93365219 +4082 chr4 + 190214555 180390254 180390253 180390423 170 ATATATATATTTATATATATATTTATATATATATTTATATATATA-TATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTA-TATATAT chr4 + 94230402 83540902 83540901 83541068 83540902 83540901 83541068 167 ACATTTAAAATTACATGAATATAGACACACAAACCCACTGATATAGCATGATTATGTACATTGCAGTAAATGAATATATATAATCATAGAAA-----ATACATATTTTTTTATGTGTGCAGGCACATATGCATATAAACTGAGATACATATTCATATATATTTAGTATGTAT .:..x..x.x...:..:x....xx.:.:.:.x.:::.:xx.....-:..xxx...:..:...xxx:..x..:xx........x.:...x.x.-----...:....x...x...:.:.x:.x::.:....x:.....x.:.x.x...:.....:...........-...:... 45M1I46M5D67M1I7M 108/165 65.5% 167/94230402 0.0% 7/165 4.2% 96849352 93365203 +4018 chr4 + 190214555 180390278 180390277 180390445 168 ATATATATATTTATAT--ATATATATTTATATATATATTTATATA-TATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTA-TATATAT chr4 + 94230402 83540902 83540901 83541068 83540902 83540901 83541068 167 ACATTTAAAATTACATGAATATAGACACACAAACCCACTGATATAGCATGATTATGTACATTGCAGTAAATGA--ATATATATAATCATAGAAA---ATACATATTTTTTTATGTGTGCAGGCACATATGCATATAAACTGAGATACATATTCATATATATTTAGTATGTAT .:..x..x.x...:..--.....x.:x:.:.x.:x:.:.x.....-:..:x....:..:...xxx:..x..:x--.........x.:...x.x.---...:....x...x...:.:.x:.x::.:....x:.....x.:.x.x...:.....:...........-...:... 16M2I27M1I27M2D19M3D67M1I7M 111/163 68.1% 167/94230402 0.0% 9/163 5.5% 96849376 93365179 +3205 chr4 + 190214555 180390314 180390313 180390402 89 TTATATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATA chr4 + 94230402 81427529 81427528 81427617 81427529 81427528 81427617 89 TTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ........:.....::..:.::xx.xx.x.x.xxx..::......:...x.......:..::.:........:...xxx.:x:...... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 98962785 91251770 +3205 chr4 + 190214555 180390336 180390335 180390424 89 TTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATA chr4 + 94230402 81427529 81427528 81427617 81427529 81427528 81427617 89 TTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ........:.....::..:.::.xxxx.x.x.xxx..::......:...x.......:..::.:........:...xxx.:x:...... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 98962807 91251748 +3355 chr4 + 190214555 180390368 180390367 180390484 117 ATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATA chr4 + 94230402 72529188 72529187 72529302 72529188 72529187 72529302 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:...:.....:x...........x.....x:..x....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.::.x.:.:.:.:.x.:.:..:..x...... 72M1D7M1D36M 76/115 66.1% 115/94230402 0.0% 2/115 1.7% 107861180 82353375 +3355 chr4 + 190214555 180390368 180390367 180390484 117 ATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATATATATTTATATATATTTATATATATTTATATA chr4 + 94230402 72525615 72525614 72525729 72525615 72525614 72525729 115 ATTCATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTAT-TACATTT-TATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:...:.....:x...........x.....x:..x....x.xx..:x.:xxxx:.x.:..x:.:..:...-..:....-....:.::.x.:.:.:.:.x.:.:..:..x...... 72M1D7M1D36M 76/115 66.1% 115/94230402 0.0% 2/115 1.7% 107864753 82349802 +3210 chr4 + 190214555 180390498 180390497 180390570 73 TTATATATATATTTATATAT--------------ATTTGTATATATTTATATATATTTATATATATATTTATATAT--ATTTGTATATA chr4 + 94230402 81427529 81427528 81427617 81427529 81427528 81427617 89 TTATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ........:.....::..:.--------------..x:.......:...x.......:..::.:........:...--..xx....... 20M14I42M2I11M 58/73 79.5% 89/94230402 0.0% 16/73 21.9% 98962969 91251586 +3335 chr4 + 190214555 180390638 180390637 180390735 98 ATATTTATATATTTATATACTTTTATATATTTATATATTTATATAT--ATATTTATATACTTATATATATTTATATATTTATATATATATTTATATATTT chr4 + 94230402 22303518 22303517 22303612 22303518 22303517 22303612 95 ATATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGC-----TATTTATAAAATT ......x..x.x....:...x......:...x..x..........:--.:....:...::x:::.:.x..x......x..::-----........x.x.. 46M2I34M5D13M 68/93 73.1% 95/94230402 0.0% 7/93 7.5% 158087120 32127435 +3329 chr4 + 190214555 180390791 180390790 180390880 90 TATATATATATTTATATATATTTATATATTTATATATTTATATATATATTTATATATTTATATATATTTATATATA-----TATTTATATATTTA chr4 + 94230402 22303519 22303518 22303613 22303519 22303518 22303613 95 TATTTTTAAAATTATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATAGTTGCTATTTATAAAATTA ...x.x..x.x....:..::......:...x..x..........:.x.:x.x.:...x..:::.:.xx........-----........x.x... 76M5I14M 65/90 72.2% 95/94230402 0.0% 5/90 5.6% 158087272 32127283 +3305 chr4 + 190214555 180390849 180390848 180390930 82 TATATATATTTATATATATA----TTTATATATTTATATATATTTATATATATTTATATATATATTTATATATTTATATATATTTA chr4 + 94230402 81427532 81427531 81427617 81427532 81427531 81427617 86 TATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA .....:.....::..:.::.----...x.xx..x::......:...x.......:..::.:........:....x..:x:...x.. 20M4I62M 58/82 70.7% 86/94230402 0.0% 4/82 4.9% 98963317 91251238 +3371 chr4 + 190214555 180390909 180390908 180391055 147 TTTATATATTT---ATATATATTTATATATATGTTTATATATGTTTATATATATTTATATAT-ATTTATATATATATTTTTATATATTATATATTTATATATATATTTATATATAT--------ATTTATATATGTATATATATTTATATATATTTATA chr4 + 94230402 42486471 42486470 42486628 42486471 42486470 42486628 158 TCTGCATATTTGGCATGAATAGATATCATTATTTTAAAATAC-TTAATACTCGTTTACACATTACCTACAAGTATATGTTTACATACTATATAATTAGATATATAGTTACATATATTGAATGTGCTTTAAAGAACTAAAGGCATTTATGTAAAATAATA .:.::......---..:x...xx...xxx...x..x.x...:-..x...:x::....:.:..-.::..:.x:.....x....:...:......x...x.......x...:......--------x....x.x.xx..x.x::......:..x.x.x... 11M3I28M1D19M1I53M8I35M 100/146 68.5% 158/94230402 0.0% 13/146 8.9% 137904438 52310117 +3515 chr4 + 190214555 180391017 180391016 180391150 134 ATATATTTATATATGTATATATATTTATATATATTTATATATGTATATATATTATATTTATAAATATATATAATATATCCATGTAGCTTTTGTACATGTAAATATCTATGTAGACA--CATATTTGCATATTTGTG chr4 + 94230402 5240524 5240523 5240644 5240524 5240523 5240644 121 aTATATTTATAGAAGTATATGAATTTATATGTATTTATATAAGTACATGAAGTGTA--TAGGGTTGTATATTGTATA------GAGTT-------ATGTAAATAATTATATGCAcagtcatatcgtctgatttttg ...........x.x......:x........:..........x...:..:x.x.:..--..x::x.:.....x:....------x..:.-------.........x:...:.:x...--.....:xx.xx....x.. 56M2D19M6D5M7D21M2I18M 88/119 73.9% 121/94230402 0.0% 17/119 14.3% 175150493 15064062 +3072 chr4 + 190214555 180391020 180391019 180391086 67 TATTTATATATGTATATATATTTATATATATTTATATATGTATATATATTATATTTATAAATATATA chr4 + 94230402 74437262 74437261 74437328 74437262 74437261 74437328 67 TATTTATATATGTACATATATGCACGTTCATCTGTGTATATGTGCATGTTGTACTTGTATGCATCTA ..............:......x:.::.x:..:.:.:...:.:.::..:..:..:..:..x::..x.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 105953758 84260797 +3337 chr4 + 190214555 180391130 180391129 180391194 65 ACACATATTTGCATATTTGTGTATATATGCACACATATACATATTTGTGTGTATATATGTATGCA chr4 + 94230402 22600200 22600199 22600264 22600200 22600199 22600264 65 ACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCA .........::...::xx::::..::..:..x.x....::............:......:..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 157790930 32423625 +3044 chr4 + 190214555 180433217 180433216 180433267 51 CCCAATTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTAAGAC chr4 + 94230402 87791847 87791846 87791897 87791847 87791846 87791897 51 CTCCATCTCCCTCCTTCCTCCTTTTTTTTTTTTCCTTTTTCTTTTTAAGAC .:.x..:..::..:...:.:....:...:....::.....:.......... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 92641370 NA +3038 chr4 + 190214555 180440380 180440379 180440440 61 TCTCCCACACAATCCAGAGAGCTTCTCTGCTCTTTTTTTTTTTTTTTTTTTTTTCCCCCAG chr4 + 94230402 4183488 4183487 4183548 4183488 4183487 4183548 61 TCTGTGACACAATGAATGCAGATTATCAGCTCTTTTTCTTTTTTTTTTCCTTTTTCCCCAG ...x:x.......xx.x:x..x..x..x.........:..........::....:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 176256892 13957663 +3232 chr4 + 190214555 180440407 180440406 180440464 58 TGCTCTTTTTTTTTTTTTTTTTTTTTTCCCCCAGATGGAGTCTTGCTCTATCACCCAG chr4 + 94230402 4754018 4754017 4754075 4754018 4754017 4754075 58 TGCTGTTTTTTTTTTGTTTTTTTTTTTTCCCCATAGGGGCTCTGCCTCCATCACTGAG ....x..........x...........:.....x.x..:x...xx...:.....:x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 175686389 14528166 +3077 chr4 + 190214555 180447078 180447077 180447143 66 AAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAATGAAGATTCATGATTTGAGCATGTAGAGATG chr4 + 94230402 91279344 91279343 91279409 91279344 91279343 91279409 66 AAAAAAAAAAAAAAAGACAAAGAAATTGAAAGAATTGAAAAATCATCCTTTTGGTTTGTGGAAATG .........:...:.:.x.......xx:......x....:.x....xx...x:.:x...:..:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 89167734 NA +3287 chr4 + 190214555 180450794 180450793 180450883 90 TGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAGTCAGGAAGGAAAGAAAGGGCAAAGCCGAAAGACATTGCAA chr4 + 94230402 54980576 54980575 54980665 54980576 54980575 54980665 90 TAAAACTCTGTCTCAAAATACAGAACAAATGAAAAAAAAATAACAAAAAGCTCACAATCAGAGAAGGTGAGACTGCAAAGGACAATGCAA .:.:..............x.x.:..x...x:.........x..x.x....::x:x..xx.:....:.x.x:.xxx.:..:....x..... 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% 125470218 64744337 +3037 chr4 + 190214555 180462759 180462758 180462819 61 TATCTTTCAGATATTTATTTCATCCTTTACATAATTTTAACACTTTCCCAACTTTTCTCCT chr4 + 94230402 72783518 72783517 72783578 72783518 72783517 72783578 61 TATCTGTCAATTATTTATTTCATCATTTCCATTATTACATCACTTTCCCCCTTCTTTTTCT .....x...:x.............x...x...x...x:.x.........xx:.:..:.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 107679241 82535314 +3383 chr4 + 190214555 180477264 180477263 180477337 74 TTTTTAATCATTTGTATTTGTGTGTATGTATATATATGTTT------ATATGTGTGTGTATATATATATATACACACATA chr4 + 94230402 85834529 85834528 85834608 85834529 85834528 85834608 80 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATA ......x........:.:.......:...:.:.:...xxx.------...::.:...:x...:..:.x...:........ 41M6I33M 55/74 74.3% 80/94230402 0.0% 6/74 8.1% 94642735 NA +3228 chr4 + 190214555 180507588 180507587 180507674 87 GCCTGGAAGGCAGAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAGAAAAAAGAAAAG chr4 + 94230402 42234749 42234748 42234825 42234749 42234748 42234825 77 GCTTTCAAAGCAAAGTAA----------TTAAAGAAAAAAGAAAAATAAAAAAAAAGTGAAGCAAGATTAATAAGAAACAGGGAAAG ..:.xx..:...:.....----------:x...:......:.....x.........:x:..:x..:.....x......x.:.:.... 18M10D59M 57/77 74.0% 77/94230402 0.0% 10/77 13.0% 138272839 51941716 +3016 chr4 + 190214555 180507613 180507612 180507677 65 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAGAAAAAAGAAAAGAAA chr4 + 94230402 36268513 36268512 36268577 36268513 36268512 36268577 65 TCCCACAGAAATGAGAAAAAAAAAAAAAAAAAAAGCAAAATATTTCAAGATGAAGAGGAGGGAAA ..:..x.:...x:.:...................:x....x...xx..::x:..:..:.::.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 144239100 45975455 +3081 chr4 + 190214555 180507619 180507618 180507676 58 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAGAAAAAAGAAAAGAA chr4 + 94230402 69582232 69582231 69582289 69582232 69582231 69582289 58 AGAATGAAAAAAAAGAAAGAAAAAAAATGACAAAAATGACAACGAAAAGAGGAGAGAA .:..x:........:...:........x:.x......x.x..x.....:..:.:.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 110925387 79289168 +3330 chr4 + 190214555 180550963 180550962 180551035 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGACAATTACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x.xx.xx..x:..........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 104517758 85696797 +3033 chr4 + 190214555 180586153 180586152 180586218 66 ACTACTCTTCTTTACATAAATGTTGGTATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 87734082 87734081 87734147 87734082 87734081 87734147 66 ACTGCATCTTTCTAATTAAATGTTGGTTTCTGTCTGTGTATGTATATATAGATATATGTTTATGTA ...:.x::.:.:..xx...........x.x.:.x.:.:...:........x......:.x...:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 92852071 NA +3407 chr4 + 190214555 180586185 180586184 180586257 73 TATATATATATATATATATATATATATATATATATATATAGTTGCAGATAATTCTAAGAAAAATGTTGTTTTA chr4 + 94230402 25262938 25262937 25263010 25262938 25262937 25263010 73 TAAATATATGTATATTTACACATATACTTACACATATATAGTCAGAAATAGTACTATCAAATATGGTATTTTA ..x......:.....x..:.:.....:x..:.:.........::x.:...:.x...xx...x...x.:..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 155323247 34891308 +3261 chr4 + 190214555 180588633 180588632 180588697 65 CTTTCTCTCTCTTTCTTTCTCTTATACACACACACACACACACACACACACACACACAGAGAAGA chr4 + 94230402 75248049 75248048 75248113 75248049 75248048 75248113 65 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagagaaaaaa ...:........:...:.....:.:...............x.x.x.x.x.x.x.x.x...:..:. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 105340584 84873971 +3179 chr4 + 190214555 180632115 180632114 180632175 61 AAATCACTACATAAGTGCTATATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60163439 60163438 60163499 60163439 60163438 60163499 61 AAATCACTGCAACGGTGCTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGT ........:..xx:.......x..x:x.x...x............:.:........x..:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 120468676 69745879 +3946 chr4 + 190214555 180635059 180635058 180635139 81 CACTGTGGCCCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACGGGAGGATCACTTGAGCCCAGGAGATGGAGTCTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:x...x......:.........::::........x.xx.x.:.x.......:.....:..x.xx:.x...... 81M 59/81 72.8% 81/94230402 0.0% 0/81 0.0% 104601862 85612693 +3065 chr4 + 190214555 180697570 180697569 180697639 70 ACAGTGAAATTCAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACAGAGAGAACAAGTTTG chr4 + 94230402 42016605 42016604 42016674 42016605 42016604 42016674 70 ACAATTGAGCTTGTATCCTTTTTTCTTTTTTTTTTCTTTTTTGTCTTGTGCAGCCATAAGCACAGATTTG ...:.x:.::.::x..x.......:..........:......x.:..x....:.x:x:..x...::.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 138680965 51533590 +3249 chr4 + 190214555 180709139 180709138 180709221 83 CGTGGTGGCTCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAATCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:x..:.--....:.:...........::........x.xx.x...x::......:....:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 104675942 85538613 +3154 chr4 + 190214555 180749720 180749719 180749791 72 ATATATATATGTGTGTGTGTGTGTGTATATATATATAATA----TATGTGTGTCTATATAATAAAAATGTTATATA chr4 + 94230402 24523917 24523916 24523989 24523917 24523916 24523989 73 ATATATATATGTTTACTTGTGTGTGTATATATATATAATAATCTTATAGCTGTTGACAGAAT---AATGTTCTGTA ............x.::x.......................----...:xx...:x.:.x...---......x.:.. 40M4I18M3D11M 56/69 81.2% 73/94230402 0.0% 7/69 10.1% 156225803 33988752 +3346 chr4 + 190214555 180755888 180755887 180755977 90 TTAAACA--CACACACAATACAAGCACACATACACACACACACACACACACACACACACACACAAAAGATCAAAAAATAAGAGTATTAGGAA chr4 + 94230402 12801916 12801915 12801998 12801916 12801915 12801998 83 TTAAACATCCAAACACAAT---------TGTACGTATACATGACCATACACACACACACACACAAAAAACTAAAATAAAATAATAACAGGAA .......--..x.......---------::...::.:...::xx..:....................:.::....x.x..x.:..x:..... 7M2I10M9D64M 61/81 75.3% 83/94230402 0.0% 11/81 13.6% 167953972 22260583 +3212 chr4 + 190214555 180778731 180778730 180778791 61 ATGTGTGTGTGTTTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTGAGAGG chr4 + 94230402 24989017 24989016 24989077 24989017 24989016 24989077 61 ATGCTTGTGAATTTAGGTTTTCTTTTCTTTTATTTATTTGTTTGTTTGTTTTTTTTGGGGG ...:x....x:...xx.....:.x..:x...:...:...................x:.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 155789714 34424841 +3387 chr4 + 190214555 180784198 180784197 180784271 74 TTTATGGCTTGTTTGGGAAAGAGTA-------GTTCTAATTTCTTCTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 34387685 34387684 34387763 34387685 34387684 34387763 79 TTTATTGATTGTT--GAAAGGAATAAAAATAGGTTATAATTTATTCTGCTGCTTTACTTTTTTTCTTTTCTTTTTTTTTTT .....x.x.....--.:..:..:..-------...x......x....x..x:...x........:....:........... 13M2D10M7I49M 59/72 81.9% 79/94230402 0.0% 9/72 12.5% 146396513 43818042 +3119 chr4 + 190214555 180784224 180784223 180784284 61 TTCTAATTTCTTCTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAA chr4 + 94230402 29547420 29547419 29547480 29547420 29547419 29547480 61 TCCTGATTTCTTCCTCTTTTCTTCATTTTTTTTTCTGTTTCCTTTACCATTTTTAAGAGAA .:..:........:......:.:.x.........:.x...::...x::x.....xx..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 151236804 38977751 +3369 chr4 + 190214555 180784225 180784224 180784278 54 TCTAATTTCTTCTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 80507630 80507629 80507683 80507630 80507629 80507683 54 TTTAATTTCTACTTCCTCTTTGCTATTCCTTTTTTTTTTTTTTGTCTTTTTTTT .:........x....:.:...x..x..::..............x.:........ 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 100276595 89937960 +3051 chr4 + 190214555 180825856 180825855 180825928 73 CTTTTTAGGCTTTTGTAGTTTTTGTTTTAGAACAAAGGCTCAGATTTCTTTTTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 9639901 9639900 9639973 9639901 9639900 9639973 73 CCTTCCAGCCTTTTGAACATTTTATTTTGTTGTAGGATTTAAGATGGCTTTTTCTTTTTTTTTTTTTATTTTT .:..::..x......x.xx....:....:xx::.:::x:.x....xx....................x..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 171185955 19028600 +3157 chr4 + 190214555 180825888 180825887 180825936 49 CAAAGGCTCAGATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGTTTT chr4 + 94230402 51937277 51937276 51937325 51937277 51937276 51937325 49 CAAAGACTCAGATTGCCTTTTTTTTTTTTTTTCTATTTTCTTCAGTTTT .....:........x.:....:..........:.x....:..:x..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 128888611 61325944 +4269 chr4 + 190214555 180826627 180826626 180826732 106 GAAGAAGCAAGGCATGGTGGTGTGCACCTGTAGTCCCAGCTACTTGAGGGGCTGAGACCTGAGAATTGCTTGAGCTCAGGAGTTGGAGGATGCAGTGAACCATGAT chr4 + 94230402 76033185 76033184 76033285 76033185 76033184 76033285 101 GAAAGGATGATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGAT ...::::::.x:..::......--...x......:............::.......x....x...x::.....:.:...:..:.xx:..x..:..---.x...... 22M2D71M3D8M 72/101 71.3% 101/94230402 0.0% 5/101 5.0% 104793442 85421113 +3572 chr4 + 190214555 180843009 180843008 180843082 74 GTGCCCCTGTAATTCCAGCTACTTGGGGGACTGAGGCAGGAGAATCGCTTGAACACAGGAGTTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x....:.............:::.:.....x.xx.x...x.:.......x...:..:.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 104809805 85404750 +3166 chr4 + 190214555 180943861 180943860 180943926 66 TTAAATACATTTTCTTTGAGAAAGTCCTTTTTTTTTTTTTTTTTTTGATGGAGTTTCCCTCTTGTT chr4 + 94230402 19177201 19177200 19177266 19177201 19177200 19177266 66 TTAAATACCATTTCTTTGAGAATTTTCTGTTTATATTTTTTTTTCTGAATGAATTTCCTGGTTATT ........xx............xx.:..x...x.x.........:...xx..:.....:xx..:.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 161766660 28447895 +3092 chr4 + 190214555 180955645 180955644 180955703 59 TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTT chr4 + 94230402 91611855 91611854 91611913 91611855 91611854 91611913 59 TTTCTATTTTTATTTCTGTTGTTTGTTTCTTTTAAAATCTTTTTTTTTTTTCTATATTT .....x.....x...:.x..x...x...:.....x...::...........:.x.x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 89343790 NA +3258 chr4 + 190214555 180955650 180955649 180955710 61 TTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTTTTTTATT chr4 + 94230402 92252229 92252228 92252289 92252229 92252228 92252289 61 TTCTCCTTTCTAATTTTTTTTTTTTTTCACAACCATCTTTTTTTTCCCTTTTTTTTTCCTT ..:.::...:.xx..............:....::x.:........:::.........:x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 88703421 NA +3063 chr4 + 190214555 181013076 181013075 181013145 70 CTTCAGAGACAGAAGGAGAATAAAGAGGATGGATGCCACATTACGGCAATGGACAAAAATAAAAGAAAAC chr4 + 94230402 58735124 58735123 58735193 58735124 58735123 58735193 70 CTTCACAGACAGCAAGAGAAGCAGGAGGATGGAAGAGAAATTGAGGCAGAGGAGAGGCATGAAAGAAGAC .....x......x.:.....xx.:.........x.xx.x...:x....:x...x.::x..:......:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 122277952 67936603 +3329 chr4 + 190214555 181028829 181028828 181028902 74 GCGCAACTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCTGGAAGGAAAAGGCCGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:...xx....:.:...........::........x:xx.x...x..........::....xxxx:...:.:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 104995625 85218930 +3232 chr4 + 190214555 181031436 181031435 181031508 73 ACACGTATATATACATATGTATATATGTATATATGCACATGCATAGGCATATATATGTATATATGCACATGCA chr4 + 94230402 61270769 61270768 61270841 61270769 61270768 61270841 73 ACAACCATGAATATATTTGTATATATGTATATACGCACGTACACAGACACTCATGTATAGGTACACAGCTGCA ...xx:..:x...:..x................:....:.:..:..:..:x:..:.:..x:..::..xx.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 119760667 70453888 +3339 chr4 + 190214555 181031777 181031776 181031846 70 ATATATATATATAGATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTT chr4 + 94230402 6857610 6857609 6857679 6857610 6857609 6857679 70 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCT .......::..:.x.::...:x:.........x...........x.:x.x...xx......:....x.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 174174167 16040388 +3411 chr4 + 190214555 181031779 181031778 181031848 70 ATATATATATAGATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTT chr4 + 94230402 6857610 6857609 6857679 6857610 6857609 6857679 70 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAATAATTTTTTTCTCTTATCT .......::..x...::.:.:x:.........x.........:.x.:x.x...x.........:..x.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 174174169 16040386 +3033 chr4 + 190214555 181031796 181031795 181031854 59 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCT chr4 + 94230402 33251003 33251002 33251061 33251003 33251002 33251061 59 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .............:.:.:.....:......x.xx.x..x...x.:...x..x.....:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 147780793 42433762 +3298 chr4 + 190214555 181031798 181031797 181031854 57 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCT chr4 + 94230402 33251003 33251002 33251059 33251003 33251002 33251059 57 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTT .............:.:.:............x.xx....x...x.....x..x...:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 147780795 42433760 +3332 chr4 + 190214555 181031798 181031797 181031854 57 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCT chr4 + 94230402 23522764 23522763 23522820 23522764 23522763 23522820 57 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTT ..x.x..::..........:.:..............::.....:.x.....:.x.:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 157509034 32705521 +3088 chr4 + 190214555 181031800 181031799 181031854 55 TGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCT chr4 + 94230402 33251003 33251002 33251057 33251003 33251002 33251057 55 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTT .............:.:.:...:........x.x.....x.:.x.....x..x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 147780797 42433758 +3089 chr4 + 190214555 181031802 181031801 181031855 54 TGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCTG chr4 + 94230402 23522764 23522763 23522817 23522764 23522763 23522817 54 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTG ..x.x..::......................x.x..:::...::.x........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 157509038 32705517 +3021 chr4 + 190214555 181031805 181031804 181031840 36 GTGTGTGTGTGTGTGTATATATATATATTTTTTTTC chr4 + 94230402 69857204 69857203 69857239 69857204 69857203 69857239 36 GTGTGTGTGAGTGTGTGTATATATATATTTTTTTTC .........x......:................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 111174601 79039954 +3163 chr4 + 190214555 181068856 181068855 181068927 72 CTGTGTTCTAATTATATATATATATAAAAATATATATATTTATATATATTTTTATATATATTTATATATATA chr4 + 94230402 56938571 56938570 56938642 56938571 56938570 56938642 72 CTTTGTTTGCACCACACATAGATATATTAAAATATAAATGAATATATGCTTTTATATGTATTCAAATATATA ..x....:xx.::.:.:...x.....xx..x.....x..xx......::........:....:.x....... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 124130285 66084270 +3244 chr4 + 190214555 181069681 181069680 181069752 72 GTATATATAAGTGTATGTGTATATACATATATACATATATATACACATATATAT--ATACACACACACACACAT chr4 + 94230402 85834542 85834541 85834615 85834542 85834541 85834615 74 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ..:.x.:.:x....:.....:...xx..:..x:....:....::.x...:..:.--..:......:........ 54M2I18M 52/72 72.2% 74/94230402 0.0% 2/72 2.8% 95235139 NA +3086 chr4 + 190214555 181069692 181069691 181069745 54 TGTATGTGTATATACATATATACATATATATACACATATATATATACACACACA chr4 + 94230402 70600711 70600710 70600764 70600711 70600710 70600764 54 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACA ...:..:...x:.x...:..:..x....:.....:.....x.:..:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 110468981 79745574 +3045 chr4 + 190214555 181069700 181069699 181069745 46 TATATACATATATACATATATATACACATATATATATACACACACA chr4 + 94230402 50629534 50629533 50629579 50629534 50629533 50629579 46 TATATACCTATATAAATATGTATACACACATGTAAATACACAAACA .......x......x....:........:..:..x.......x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 130440166 59774389 +3210 chr4 + 190214555 181070112 181070111 181070266 155 GATTTGATTTTGTGTGGTATATAAAACGTGGAGAAGGATGATGGTGAATTATATAGGCATGGTGGCGAGGCCCACCTTTAGTCCTAGCCACTTGGAAGGCTGAGGCAGGATGATCACTTGAGCCCAGGAGATTGTAGTGAGCTATG----ATCATGCCA chr4 + 94230402 76033155 76033154 76033289 76033155 76033154 76033289 135 GACCTGGTTTGGGAAAGTATGTAATGTCATGA-AAGGATGATA--------------CACAGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTT----TGGGCTGTAGAACATGATGCCA ..::..:...x.x:x:....:...x::xxx..-.........:--------------..::....:.-----...x.x....:.:...:.....:.........x.xx.xx:.x.......:.....:..x..----..:...:.:----..x...... 32M1D10M14D10M5D61M4D9M4I9M 92/131 70.2% 135/94230402 0.0% 28/131 21.4% 105036957 85177598 +3161 chr4 + 190214555 181076808 181076807 181076846 39 TTTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:...................x.x.............. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 105828758 84385797 +3627 chr4 + 190214555 181076809 181076808 181076850 42 TTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248047 75248046 75248088 75248047 75248046 75248088 42 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .:..::.................................... 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 105828762 84385793 +3102 chr4 + 190214555 181076813 181076812 181076848 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 168475509 21739046 +3353 chr4 + 190214555 181076813 181076812 181076852 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 105828764 84385791 +3139 chr4 + 190214555 181076815 181076814 181076854 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 105828766 84385789 +3316 chr4 + 190214555 181076815 181076814 181076850 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 168475511 21739044 +3102 chr4 + 190214555 181076817 181076816 181076852 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 168475513 21739042 +3047 chr4 + 190214555 181081342 181081341 181081409 68 ATATATACACAGAATAGATATAGATATATGTGTGTATGTATACATATATACATATATAGAGAGATCCT chr4 + 94230402 29797126 29797125 29797193 29797126 29797125 29797193 68 ATTTCTGCACATGGCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTT ..x.x.:....x:::.x.:...x:...::..........:..x.......:.:.:.:.....:..::. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 151284216 38930339 +3197 chr4 + 190214555 181082257 181082256 181082339 83 GTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATATATATATATTCAATTGTATATATATACACA chr4 + 94230402 85834542 85834541 85834614 85834542 85834541 85834614 73 GTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTA----------TGCACACATACACACA ....x.................:.xx..:..x::...:....:.:x...:..:.x..----------..:.:.:...:..... 57M10D16M 54/73 74.0% 73/94230402 0.0% 10/73 13.7% 95247715 NA +3780 chr4 + 190214555 181082258 181082257 181082368 111 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATATATATATATTCAATTGTATATATATACACAACTGAAATAGTGA------CTCTATATATATAGAT chr4 + 94230402 85834541 85834540 85834647 85834541 85834540 85834647 107 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGT----------TTATGCACACATACACACATGGCCTGGGGAATTTTCTTCTGTATGTACAAAT .....x...................xx..:..x::...:.......x...:..:.----------..:.::.:.:.......xx..:xx.:.x..------:...:...:..:.:.. 55M10D30M6I16M 73/101 72.3% 107/94230402 0.0% 16/101 15.8% 95247717 NA +3348 chr4 + 190214555 181082272 181082271 181082425 154 TGTGTGTGTATATATATATATATATATATGTATATATATATATATATTCAATTGTATATATATACACAACTGAAATAGTGACTCTATATATATAGATATGTATAGATATAGATGTGTATATACATATATATATATATATATATATATATATATA chr4 + 94230402 91738165 91738164 91738294 91738165 91738164 91738294 130 TATGGGGGCATATAGATATGTTTTCTTATGACAGCATATAGATATGTTTTCTTGT----------------GGAAT--------TATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATA .:..x.x.:.....x....:.x.x:x....xxx::.....x....:..:xx....----------------.:...--------.....x...:x........x:...x...x..x..:.x.x...:...:.x.x.:.....:..:x:...... 55M16D5M8D70M 89/130 68.5% 130/94230402 0.0% 24/130 18.5% 89344107 NA +3095 chr4 + 190214555 181086774 181086773 181086853 80 CCCTCATAGTTTATAGAAAAGTAGTTGTATCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 + 94230402 64932057 64932056 64932136 64932057 64932056 64932136 80 CCCCCAAAGCTGTTAAAAAGTTATTTGTGTTTGATTTGTGCCTATTTGTTTTTTTTTGTTTGTTTGTTTTTTTTTGTCAA ...:..x..:.xx..:...:x..x....:.:.:x...x.x::.x...x.........x...x...x.........x.::. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 116154717 74059838 +3592 chr4 + 190214555 181091622 181091621 181091694 73 TGCACCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........x.::........x.xx.x...x..........::.:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 105058417 85156138 +3019 chr4 + 190214555 181102105 181102104 181102185 81 AGCTTGAGCACTTGCTGTGCCATTAAAGTAAAGTGTGCTGACCCTTGGCAAAAAAAAAAAAAAAAAAAAAAAAACAGACAA chr4 + 94230402 65959214 65959213 65959294 65959214 65959213 65959294 81 AATTTGCATTCTAGTTGTCCAGTTCAACTGTAGTATGGGGAGATTTGGCAAAAAAAAAAAACAAAACAAAAAAACACAAAA .::...x::x..x.:...x.x:..x..x.:x...:..xx..xx:.................x....x.........x.x.. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 115142891 75071664 +3103 chr4 + 190214555 181138175 181138174 181138242 68 AGAGCAAAACGCAGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGTGCAGCAAGGCTGCTG chr4 + 94230402 17320786 17320785 17320853 17320786 17320785 17320853 68 AAAGCAAAATGTAATTTTGAAAAAGGAAAAAAAAAAAAAGTAAAGAAAACCCTGCATGAAGAGAGCTG .:.......:.:.:.:..:.....::.............:x...:..:.xxx....xx...:xx.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 163817389 26397166 +3208 chr4 + 190214555 181149518 181149517 181149584 67 AATCATATATATA---TATATATATATATATATATTTTTTTTTTTTTTTTTTTTTAAAG----ACAGGATCTTT chr4 + 94230402 24792611 24792610 24792684 24792611 24792610 24792684 74 AATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTT ...:.:x...:..---..................xx........x.........:...:----.:x....:... 13M3I43M4I11M 55/67 82.1% 74/94230402 0.0% 7/67 10.4% 156356907 33857648 +3017 chr4 + 190214555 181149528 181149527 181149566 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 156356902 33857653 +3721 chr4 + 190214555 181165119 181165118 181165191 73 TGCACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGAAGTTTGAGGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.:.......::::........x.xx.x.:.x::.....:........:..x:....::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 105131914 85082641 +3392 chr4 + 190214555 181197737 181197736 181197818 82 CATGGTGGCACGCACCTTAGCTCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT-GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::.:.::-x...:............::........x.xx:x...x.............:..x:xx:..:..:.. 15M1D66M 56/81 69.1% 81/94230402 0.0% 1/81 1.2% 105164540 85050015 +3177 chr4 + 190214555 181204794 181204793 181204867 74 TGTATATCGTATACATATGTACTATATATGT--ATATATGTACTATATATACATATGTATTATATACATATATACA chr4 + 94230402 73857022 73857021 73857097 73857022 73857021 73857097 76 TGAATACAGTGAATATTTATAGTGAATATGTGAATATATGTGTAATATATATAGATGCATTATATACACACGTACA ..x...:x..:x.:..x.:..x.:x......--........::x.......:.x...:..........:.::.... 31M2I43M 54/74 73.0% 76/94230402 0.0% 2/74 2.7% 107347772 82866783 +3425 chr4 + 190214555 181218548 181218547 181218617 70 CGTGGTGGTGCATGCCTGTAATCCCAGCTACTGCAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........:.--....:.:.........xx.:........x.xx.x...x...........:.:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 105185351 85029204 +3190 chr4 + 190214555 181242283 181242282 181242352 70 CGTGGTGGTGGGCACGTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--..........:.........:.::........x.xx.x...xx::x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 105209086 85005469 +3115 chr4 + 190214555 181245127 181245126 181245207 81 CCCTTCACTCAAAGCCAAAT-----TGTATATATATACATATATGCACATGTGTGTATGTATGTACATATATACACGCTTATATGT chr4 + 94230402 55694426 55694425 55694508 55694426 55694425 55694508 83 CTCTTCAC---AAGACAGATGCTCCTGTTCTTGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .:......---...x..:..-----...x:x.:...:....:..:...............:.:.x.x:..:...::.:x.....:. 8M3D9M5I61M 57/78 73.1% 83/94230402 0.0% 8/78 10.3% 125550701 64663854 +4362 chr4 + 190214555 181245134 181245133 181245265 132 CTCAAAGCCAAATTGTATATATATACATATATGCACATGTGTGTATGTATGTACATATATACACGCT-------------------TATATGTGTATGTATAATATATACATATGTGTGTGCATATACATATATATTTATAGAATATGGAA chr4 + 94230402 27702282 27702281 27702426 27702282 27702281 27702426 145 CTTAAGACTGATTTCTAGGAATATACATATATTCCCAAGTGTGTGTGTATATATATATATATTC-CTAGAAATTGATCTTAAGTAatatatatatatatataatatatactgatata-----atatatatatacagatataatatatataA ..:..::.::.x..x..x:x............x.x..x......:.....:..:.......:x.-..-------------------.....:.:...:............xx..:.:-----.....:.....:.xx....:x....:x.. 64M1D2M19I31M5D29M 93/126 73.8% 145/94230402 0.0% 25/126 19.8% 153542852 36671703 +3584 chr4 + 190214555 181253578 181253577 181253661 84 AGCTACTTAACCTTTCTGTGCCTCAGTTTCCTCATGTGTAGAATGGGGC-AAGAATAG-TGTTTACCTCATAGATTTATTGAGAAG chr4 + 94230402 83501152 83501151 83501237 83501152 83501151 83501237 86 AATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGTATTGTGAGG .::..........x.x.............:.:..:x....:.....:..-:.x.:..:-.:::.......:..:xx.....x..:. 49M1I8M1I27M 61/84 72.6% 86/94230402 0.0% 2/84 2.4% 97752426 92462129 +3042 chr4 + 190214555 181295746 181295745 181295802 57 TCTCTATATATGTGTGTGTGTATGTGTGTGTGTGTATATATGTATGTATGTATATAT chr4 + 94230402 85834529 85834528 85834585 85834529 85834528 85834585 57 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGT .:.:...x:..x.....x...:...............xx.....x.:..::....:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 95461217 NA +3424 chr4 + 190214555 181309376 181309375 181309474 99 TATTTGGTCCCCAAGTTATGAAGATTTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757763 53757762 53757857 53757763 53757762 53757857 95 TATTTGGTATGCAAGTCC---AAATTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCC-TTTTTTTCTTTTTTTT ........x:x.....:x---.:...:.:x.::x::.....:x.:....xxx.::.::..:..:..:.............::-.......:........ 18M3D61M1D16M 65/95 68.4% 95/94230402 0.0% 4/95 4.2% 127551613 62662942 +3280 chr4 + 190214555 181309377 181309376 181309468 92 ATTTGGTCCCCAAGTTATGAAGATTTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 86491028 86491027 86491119 86491028 86491027 86491119 92 ATTTTGTTTCCAAGATGTTGAAACAATATGTTTCAATTTTTTTTTTTTTTTTTTCAAAATTCCCCTCCTACATTTTCTCTTTCTTTTTTTTT ....x..::.....x.:.x:.:.:xx.xxx....xx.....::..:...:.....xxxx.:.:......x.x....:.:...:......... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 94818349 NA +3594 chr4 + 190214555 181309405 181309404 181309475 71 ATTTTCTTTTTTTCCTTC----TTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 15335356 15335355 15335430 15335356 15335355 15335430 75 ATGTTCTGTTTTCACTTCGTACTCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTTATT ..x....x....:x....----.:...................:.:..x.x:.......x...x...x....x.. 18M4I53M 57/71 80.3% 75/94230402 0.0% 4/71 5.6% 165974049 24240506 +3832 chr4 + 190214555 181309406 181309405 181309505 100 TTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTC-------CTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 8984544 8984543 8984650 8984544 8984543 8984650 107 TTTTTTTTGTTTTGTTTTGTATTTTTTTCTGTAAGAAAACATCTCCTGCCATTTGTTTTCATTTATTTTATTATTCTCTGTGTGTGTGCGTGTGTGTGGTTTTGTGT ....:...x...:x..:.x.x....:...:x:-------.x:.....x.:x...x....:x...x....x..x..:.:..........:.........xx.x..... 32M7I68M 72/100 72.0% 107/94230402 0.0% 7/100 7.0% 172324862 17889693 +3233 chr4 + 190214555 181309411 181309410 181309477 67 TTTTTTTCCTTCTTTCTTTTCTT-------CCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757784 53757783 53757857 53757784 53757783 53757857 74 TTCTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT ..:.:....x.....:.:x:..:-------..:..:..:..:..:.::........::.......:........ 23M7I44M 49/67 73.1% 74/94230402 0.0% 7/67 10.4% 127551627 62662928 +3052 chr4 + 190214555 181309421 181309420 181309472 52 TCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907959 56907958 56908010 56907959 56907958 56908010 52 TCCACCCTTTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ..:x:.:....:......x:..:...::.:.:..............:..... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 124401462 65813093 +3128 chr4 + 190214555 181309423 181309422 181309474 52 TTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 5672106 5672105 5672157 5672106 5672105 5672157 52 TTTGTTTTCTTACCCCCCCCCCCACCCTTTTTTTTTTTTTTTTTGTCTTTTT ...x.......x.:..:..:..:x.::.................x.:..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 175637317 14577238 +3008 chr4 + 190214555 181309432 181309431 181309475 44 TTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 56907967 56907966 56908010 56907967 56907966 56908010 44 TTCCTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTT ..........x:..:..:.:.:.:..............:..... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 124401465 65813090 +3017 chr4 + 190214555 181309436 181309435 181309479 44 TCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT chr4 + 94230402 59557963 59557962 59558006 59557963 59557962 59558006 44 TCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTTGT ......:.::............:....::x......:....... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 121751473 68463082 +3057 chr4 + 190214555 181309451 181309450 181309499 49 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 42975002 42975001 42975050 42975002 42975001 42975050 49 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGATTGT ...........:........xx...x..x:..............xx... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 138334449 51880106 +3170 chr4 + 190214555 181309452 181309451 181309502 51 TTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 26257042 26257041 26257092 26257042 26257041 26257092 51 TCTTGTCCTGTCTTTTTTTTTTTTTTGTGTGTGTGTGTATTTGTGTATTTG .:..x.::.x.:..........................:.x.....:.x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 155052410 35162145 +3275 chr4 + 190214555 181309453 181309452 181309510 58 TTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAT chr4 + 94230402 42975002 42975001 42975059 42975002 42975001 42975059 58 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGATTGTTCACAAAAT ...........:........xx......x:..............xx...x::::.:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 138334451 51880104 +3066 chr4 + 190214555 181309455 181309454 181309503 49 TTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 42975002 42975001 42975050 42975002 42975001 42975050 49 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGATTGT ...........:........xx.x....x:..............xx... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 138334453 51880102 +3280 chr4 + 190214555 181309457 181309456 181309505 49 TTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 42975002 42975001 42975050 42975002 42975001 42975050 49 TTTTTTTTTTTCTTTTTTTTGGTTTGTGGATGTGTGTGTGTGTGATTGT ...........:........x..x....x:..............xx... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 138334455 51880100 +3098 chr4 + 190214555 181309459 181309458 181309505 47 TTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 17835962 17835961 17836008 17835962 17835961 17836008 47 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTAAGCTGGTGAGTGT .................x...............:x.:xx...x.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 163473497 26741058 +3221 chr4 + 190214555 181309461 181309460 181309506 46 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 17835962 17835961 17836007 17835962 17835961 17836007 46 TTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTAAGCTGGTGAGTG .................................:x.:xx...x... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 163473499 26741056 +3030 chr4 + 190214555 181318263 181318262 181318314 52 GTTCTCCAATGAAACCAAACAAATAGGATATATATATATACACACACACACA chr4 + 94230402 1400185 1400184 1400236 1400185 1400184 1400236 52 GCTCTCTCATGAAAACATACCAAGCATATATATATATATACACACACACACA .:....:x......x..x..x..xx:x......................... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 179918078 10296477 +3857 chr4 + 190214555 181318280 181318279 181318392 113 AACAAATAGGATATATATATATACACACACACACACATACATATATATACATATACATATATATATTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACAC chr4 + 94230402 6244951 6244950 6245058 6244951 6244950 6245058 108 AGCAAGTAGGG-----ACATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACAC .:...:....:-----.:..:..x....::.:.:.:...:.:.x.....:...:..:.x:x..:x.xx.:x.x:xX:......:x.x....:....x................ 11M5D97M 72/107 67.3% 108/94230402 0.0% 5/108 4.6% 175073329 15141226 +3688 chr4 + 190214555 181318290 181318289 181318381 92 ATATATATATATACACACACACACACATACATATATATA----------------CATATACATATAT---ATATTATATATGTGTCTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529192 72529191 72529302 72529192 72529191 72529302 111 ATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:.....:...:.:.:.:x:x:.:..x...:....x.----------------...x:....x...---..x.....:.:....x..............:......... 39M16I13M3I40M 70/92 76.1% 111/94230402 0.0% 19/92 20.7% 108789098 81425457 +3688 chr4 + 190214555 181318290 181318289 181318381 92 ATATATATATATACACACACACACACATACATATATATA----------------CATATACATATAT---ATATTATATATGTGTCTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525619 72525618 72525729 72525619 72525618 72525729 111 ATACATATACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ...:.....:...:.:.:.:x:x:.:..x...:....x.----------------...x:....x...---..x.....:.:....x..............:......... 39M16I13M3I40M 70/92 76.1% 111/94230402 0.0% 19/92 20.7% 108792671 81421884 +3214 chr4 + 190214555 181318291 181318290 181318339 49 TATATATATATACACACACACACACATACATATATATACATATACATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT .......:x.................:..x....xx..:......:... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 91494359 NA +3412 chr4 + 190214555 181318296 181318295 181318390 95 ATATATACACACACACACACATACATATATATACATATACATATATATATTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACAC chr4 + 94230402 6244964 6244963 6245058 6244964 6244963 6245058 95 ATGTAGACACGTATATATATATACAAATATATATACACGTCCCTACTTGCTGAAGAANCCTGTGTAAGGGTGTGTATAAATATATATACACACAC ..:..x....::.:.:.:.:.....x.......:.:.:::x:x..:x.::.:x.x.xX:x.x...:x.x.........x.........:...... 95M 61/94 64.9% 95/94230402 0.0% 0/95 0.0% 175073332 15141223 +3574 chr4 + 190214555 181318317 181318316 181318435 119 TACATATATATACATATACATATATAT-ATTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACACACACGGCCAGG chr4 + 94230402 46140798 46140797 46140916 46140798 46140797 46140916 119 TACAGATATGTGTGCATTCAAATGTATTGCAATAAATGTTACACTATTATTTTGTGTA-ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACAGAAGTCAAGG ....x....:.::::..x..x..:...-::x...x....xx.xx.:.xxx.x...:..-.........:......x.x....:........:.:..:.:...x..x:...x.x.x.x... 27M1I30M1D61M 80/118 67.8% 119/94230402 0.0% 2/118 1.7% 135177519 55037036 +3299 chr4 + 190214555 181318345 181318344 181318423 79 TTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACA chr4 + 94230402 85834536 85834535 85834614 85834536 85834535 85834614 79 TCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:..x.:...x.x.............:...xx..:..x::.:...:.:::.x.:...:::x:..::.....:....... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 95483809 NA +4406 chr4 + 190214555 181318345 181318344 181318439 95 TTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACACACACGGCCAGGGGGA chr4 + 94230402 85834532 85834531 85834626 85834532 85834531 85834626 95 TTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATGGCCTGGGGAA ....x:..x...x.x...........:.:.:...xx..:..x:..:...:.:::.x.:...::.x..::......:.......:....x....:. 95M 66/95 69.5% 95/94230402 0.0% 0/95 0.0% 95483813 NA +3049 chr4 + 190214555 181318348 181318347 181318421 74 TATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:.:.x...x...............xx..:..x::.....:.:::.x.:...:::x:.:::.:...:....... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 95483807 NA +4073 chr4 + 190214555 181318349 181318348 181318425 77 ATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACACA chr4 + 94230402 85834538 85834537 85834614 85834538 85834537 85834614 77 ATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ..x...................:.:...xx..:..x:..:...:.:::.x.:...:::x...:......:....... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 95483811 NA +3045 chr4 + 190214555 181318366 181318365 181318405 40 TGTGTATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA ...::.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 176909284 13305271 +3074 chr4 + 190214555 181318368 181318367 181318409 42 TGTATATATATATATATACACACACACACACACACACACATA chr4 + 94230402 74671076 74671075 74671117 74671076 74671075 74671117 42 TGTATATATATATATATACACACACACACACAAAAAAAAATA ................................x.x.x.x... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 106647292 83567263 +3136 chr4 + 190214555 181318368 181318367 181318408 41 TGTATATATATATATATACACACACACACACACACACACAT chr4 + 94230402 4409082 4409081 4409122 4409082 4409081 4409122 41 TGTACATATATATATATATACACACACAGAGACACACACAT ....:.............:.........x.x.......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 176909286 13305269 +3536 chr4 + 190214555 181318814 181318813 181318885 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTATGAGGATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........x:x..x.:.x.:........::.:..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 105285608 84928947 +3276 chr4 + 190214555 181318930 181318929 181318993 64 CTCAATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGGGAAGAGAGAGAAAGAA chr4 + 94230402 1046810 1046809 1046873 1046810 1046809 1046873 64 CTTAATTCAAAAGAGACACCAAAAAAAGAAAAAAGAAAAAAAATCGAGGAAGGAGGGGAAAAAA ..:...::x...:.:.x.xx.......:......:........x..:.....:::.:....:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 180272120 9942435 +3311 chr4 + 190214555 181318933 181318932 181319018 86 AATCTCA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGGGAAGAGAGAGAAAGAATTTTACTTCCTCAGCCTTTTTGTTC chr4 + 94230402 68938748 68938747 68938834 68938748 68938747 68938834 87 AATTTCATACAACAGAAAAAAAGAAACAGAAAAAAAAGAAACCGAAAAACAGAAACAATGAATTTCCTCTTCTCCCTTCCTTTGTTC ...:...-.x..x.:.......:...x.:........:...x..:::..x...:.x..x......:x::.:...xx::::....... 7M1I79M 59/86 68.6% 87/94230402 0.0% 1/86 1.2% 112380185 77834370 +3203 chr4 + 190214555 181325373 181325372 181325450 78 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTATGCATGTATAGATACATGTATATATACAGTTATGTGC-CACAT chr4 + 94230402 85834529 85834528 85834607 85834529 85834528 85834607 79 TTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT .:.:.:.x::.x.....x.............x.....xx.....x:x......:.:..x.....xx.x.:...-..... 73M1I5M 57/78 73.1% 79/94230402 0.0% 1/78 1.3% 95490844 NA +3352 chr4 + 190214555 181325379 181325378 181325436 58 TGTGTGTGTGTGTGTGTGTGTGTGTCTGTATGCATGTATAGATACATGTATATATACA chr4 + 94230402 3414931 3414930 3414988 3414931 3414930 3414988 58 TGGGTGTGCTTATGTGTGCATGTGTCTGTATGTGTGCACAGCTGCGTGTGTACATACA ..x.....:x.:......::............::..:.:..x.:.:...:..:..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 177910448 12304107 +3223 chr4 + 190214555 181336032 181336031 181336105 74 GTGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGGCAATTGCTTGAACCCGAAAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........x.::........x.xx.xx..x::.........::...x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 105302828 84911727 +3593 chr4 + 190214555 181336878 181336877 181336945 68 AAGGGAAAGGAAAGGAAAAAGGGAAGGGAGGGGAAGGAAAAAGGGAAGGGAAGGGAAGGGAAGGAAAG chr4 + 94230402 73744718 73744717 73744785 73744718 73744717 73744785 68 AAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAG ....:...:......:...:.....:.::::::::......:...::...x:...x....:x...... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 107592160 82622395 +3082 chr4 + 190214555 181426845 181426844 181426905 61 TATATATATATACACACACACACATACATATATAGATATATATAGATATATATAGACATAT chr4 + 94230402 89823932 89823931 89823992 89823932 89823931 89823992 61 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATAT .......:x...............:...:x....:x........x:...x:xx..x:.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 91602913 NA +3088 chr4 + 190214555 181426938 181426937 181426975 38 ACATATATATATACACACACACACACAGACACACACAT chr4 + 94230402 4409085 4409084 4409122 4409085 4409084 4409122 38 ACATATATATATATATACACACACAGAGACACACACAT .............:.:.........x............ 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 177017853 13196702 +3715 chr4 + 190214555 181431506 181431505 181431626 121 TTTCCTTCCTGTTTTTTTTTTGTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTAAATAA chr4 + 94230402 63697126 63697125 63697241 63697126 63697125 63697241 116 TCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC---CCCTCTTTTCTTTCTTCCTTTTTATTTAA .:.....:.:.x.x....:.:x.x.....:.:x..::.:.x....xx....--.x....xxx:::..x....:.:x.xx.......:..---.::.............:.......xx... 51M2D36M3D29M 79/116 68.1% 116/94230402 0.0% 5/116 4.3% 117734380 72480175 +3101 chr4 + 190214555 181431523 181431522 181431617 95 TTTTGTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176360 50176266 50176265 50176360 95 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTT ....x...:.:x:.x..:..:..::...:..:x.:.x::.x:.:..x.x..x..::..::x......x.x.::x.:...x.:............. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 131255257 58959298 +3167 chr4 + 190214555 181431530 181431529 181431629 100 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTAAATAACTC chr4 + 94230402 57372028 57372027 57372127 57372028 57372027 57372127 100 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTTAGATATTTC ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x:..:::x.x..x...:...x:.. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 124059502 66155053 +3926 chr4 + 190214555 181456076 181456075 181456199 124 AGATTTACTTGGTAAATATATGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATATGTATATGTGTATA chr4 + 94230402 21109185 21109184 21109301 21109185 21109184 21109301 117 AAATTTGCTT-----ATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTA--TACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA .:....:...-----...:........x.x....x.:....x.....:..:x::::.:.::x:....::x..--.::..:.....x....:x.x...:.......:...:x:...:::..:.:. 10M5D57M2D50M 77/117 65.8% 117/94230402 0.0% 7/117 6.0% 160346891 29867664 +3011 chr4 + 190214555 181456088 181456087 181456126 39 TAAATATATGTGTGTGTGTGTGTGTGTATATATATATAT chr4 + 94230402 27325518 27325517 27325556 27325518 27325517 27325556 39 TAAATATGTGTGTGTGTATGTGTGTGTACGTACATATAT .......:.........:..........::..:...... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 154130570 36083985 +3318 chr4 + 190214555 181456120 181456119 181456202 83 TATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATATGTATATGTGTATATAT chr4 + 94230402 85834533 85834532 85834615 85834533 85834532 85834615 83 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x:..x.....x.............:x..:.xx:....x:...:::.:....x...::.:.x....:.:.::.::.:.:.. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 95621587 NA +3567 chr4 + 190214555 181456120 181456119 181456218 99 TATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATATGTATATGTGTATATATATATGTGTATATATAT chr4 + 94230402 21109194 21109193 21109292 21109194 21109193 21109292 99 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATAT ....:..:.....x.x....x.:..:.xx:.:...::x:...:..::x:.....:x...:::...:.::x:...:x.x.:.:...........:x.... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 160346926 29867629 +3789 chr4 + 190214555 181456122 181456121 181456221 100 TATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATATGTATATGTGTATATATATATGTGTATATATATATG chr4 + 94230402 21109194 21109193 21109293 21109194 21109193 21109293 100 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATG ....:........x.x....x.:...xx.:.:...::x.....:.::x:..:..:x.:..::......:x::..:x.x.:.:...:...:...:x..... 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 160346928 29867627 +3389 chr4 + 190214555 181456132 181456131 181456196 65 TGTGTGTGTGTGTGTAGGTGTGTGT--GTACACATGTGTGTGTATATATGTATATATGTATATGTGT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:...:...:...:..:.:...--...:.....:...........::.x.:....:..x...:. 25M2I40M 49/65 75.4% 67/94230402 0.0% 2/65 3.1% 94822208 NA +3320 chr4 + 190214555 181456136 181456135 181456209 74 TGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGT--ATATATGTATATGTGTATATATATATGTG chr4 + 94230402 85834541 85834540 85834616 85834541 85834540 85834616 76 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....x.....:x...........:xx....:x.::..:......--...:....x....:::.:...:.:.::.. 45M2I29M 53/74 71.6% 76/94230402 0.0% 2/74 2.7% 95621595 NA +3469 chr4 + 190214555 181464811 181464810 181464911 101 CATGGTGGCTCATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::....:x..:.--....:.::..........::........x.xx.x...xx............:..x:xx:..:..:..------:.x...:..... 14M2D67M6D12M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 105431614 84782941 +3121 chr4 + 190214555 181467053 181467052 181467125 73 TTTTACTAGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATA chr4 + 94230402 85834530 85834529 85834602 85834530 85834529 85834602 73 TTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCA .....:.x:.x.....x..............:..:.xx:...:x.::.:::...:..x...:..:.x...::. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 95632523 NA +3082 chr4 + 190214555 181467054 181467053 181467126 73 TTTACTAGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 + 94230402 85834535 85834534 85834607 85834535 85834534 85834607 73 TTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ..:.:.x....x.................::xx:...:x.::.:::.:....x...:..:.x...::.:.:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 95632519 NA +3012 chr4 + 190214555 181467072 181467071 181467128 57 TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTT chr4 + 94230402 85834541 85834540 85834597 85834541 85834540 85834597 57 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT .....x......:..........:.xx:...:x::...:....:..x...:..:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 95632531 NA +3051 chr4 + 190214555 181467074 181467073 181467130 57 TGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTT chr4 + 94230402 85834541 85834540 85834597 85834541 85834540 85834597 57 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTT .....x....:............:.xx:....x::...:....:..x...:..x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 95632533 NA +3132 chr4 + 190214555 181467075 181467074 181467139 65 GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTT chr4 + 94230402 29797139 29797138 29797203 29797139 29797138 29797203 65 GCATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTTTTTCT .::.:::.:...:..:......:.....:x.........:.:.:.x.x.x......x:.....:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 151669936 38544619 +3298 chr4 + 190214555 181467086 181467085 181467146 61 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522824 23522764 23522763 23522824 61 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT ..x.x..::..........................x:x.x..::.x.....:.x....:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 157944322 32270233 +3188 chr4 + 190214555 181467088 181467087 181467156 69 TGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTAGGCAGAG chr4 + 94230402 33251003 33251002 33251071 33251003 33251002 33251071 69 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTACAAGAAAAG .............:.:...:.:........x.xx.x.xx...x.....x..x.......x:.:.x.:.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 148216085 41998470 +3182 chr4 + 190214555 181467090 181467089 181467147 58 TGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522764 23522763 23522821 23522764 23522763 23522821 58 TGAGAGTACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTT ..x.x..::......:.:.................x::....::.x.....:.x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 157944326 32270229 +3472 chr4 + 190214555 181467090 181467089 181467149 60 TGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTA chr4 + 94230402 33251003 33251002 33251062 33251003 33251002 33251062 60 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTA .............:.....:.:........x.xx.x..x...x.....x..x........ 60M 49/60 81.7% 60/94230402 0.0% 0/60 0.0% 148216087 41998468 +3535 chr4 + 190214555 181467092 181467091 181467148 57 TGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33251003 33251002 33251059 33251003 33251002 33251059 57 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTT ...................:.:........x.xx....x...x.....x..x..... 57M 48/57 84.2% 57/94230402 0.0% 0/57 0.0% 148216089 41998466 +3017 chr4 + 190214555 181467105 181467104 181467143 39 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792626 24792625 24792664 24792626 24792625 24792664 39 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...................x:........x......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 156674479 33540076 +3864 chr4 + 190214555 181496689 181496688 181496755 67 TGCCAAATGAATTCATTAAGACCAGTGTGATTACGGTGAATGTCAAATGAATTAATAATAATGGGAC chr4 + 94230402 42303270 42303269 42303336 42303270 42303269 42303336 67 TACTAAATGAATTCATTATGATCAGTGTAATTACAATGAATACTAACTAAATTAATGGTAGTTAGAC .:.:..............x..:......:.....::.....:::..x.:.......::..:.x:... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 139193419 51021136 +3426 chr4 + 190214555 181525391 181525390 181525479 89 TGTTTCAAAAAAAAAAAAAAAAAAAAAGGAATGCAGAAGAACAGAGGGCAAAAAGTGAAGCTTTCAAATCATATCTCCCCCTGACTTTT chr4 + 94230402 2226545 2226544 2226632 2226545 2226544 2226632 88 TGTTTTCTGAAAAAAGGAAAGAGTTAAGAATTGCA-AAGAGTTGAGGGCTAATAGTGAAGATTTCAAATCATTCCTACAACCAACTTCT .....:xx:......::...:.:xx...:.x....-....::x......x..x.......x...........x:..x.xx.::....:. 35M1D53M 62/88 70.5% 88/94230402 0.0% 1/88 1.1% 179298846 10915709 +3054 chr4 + 190214555 181544365 181544364 181544436 72 TTTTGCATTCAAATACTTCAAAGCGATTTCTTTCCTTCAGGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 36268481 36268480 36268552 36268481 36268480 36268552 72 TCTTGAATCTTCATACTTGAAGGCTGCTATATTCCCACAGAAATGAGAAAAAAAAAAAAAAAAAAAGCAAAA .:...x..::xx......x..:..x::.x:x....:x...:.x.:.:...................:x.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 145275884 44938671 +3074 chr4 + 190214555 181546714 181546713 181546768 55 AGAAAAAAAAAAAAAAGAAGAAGAAGAAGAAATGGCACCTGAGTCATGTGTAGAT chr4 + 94230402 29888764 29888763 29888818 29888764 29888763 29888818 55 AGAAAAAAAAAAAAAGGAAGAAGAAGCTGCAATACCACTGGAGTTATATATGAAT ...............:..........xx.x...:x...:x....:..:.:.::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 151657950 38556605 +3029 chr4 + 190214555 181551807 181551806 181551880 74 AATATATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 5214243 5214242 5214316 5214243 5214242 5214316 74 AGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTG .:.:.x.::.:.:.:..x..::.:....:..x..::........:.::x::.........::..::x:...... 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% 176337564 13876991 +3009 chr4 + 190214555 181551816 181551815 181551862 47 ATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...::.:..x..........x...........x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 174694206 15520349 +3140 chr4 + 190214555 181551818 181551817 181551864 47 ATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857610 6857609 6857656 6857610 6857609 6857656 47 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......::..:...:.....x:.........x...........x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 174694208 15520347 +3063 chr4 + 190214555 181553290 181553289 181553359 70 TGTGTGTGTAGTGTGTGTGTATGTGTATGCGTATATATATATATATACACACACACACACACATATGTGT chr4 + 94230402 70600711 70600710 70600773 70600711 70600710 70600773 63 TGTGTGCGTAG-------GTCCATGTACACCTATACATACATATATAGACATGCACACACAGGTGTGTGT ......:....-------..x::....::.x....:...:.......x...::........x:.:..... 11M7D52M 48/63 76.2% 63/94230402 0.0% 7/63 11.1% 110952579 79261976 +3306 chr4 + 190214555 181553300 181553299 181553375 76 GTGTGTGTGTATGTGTATGCGTATATATATATATATACACACACACACACACATATGTGTA--------------ATATAGATATATTTT chr4 + 94230402 79265523 79265522 79265612 79265523 79265522 79265612 90 GTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAACACCTCTATATAAATGCACTTT .........:......:..xx.:......:...:.::::::.....:..x......x...:--------------.....:..::.:... 61M14I15M 55/76 72.4% 90/94230402 0.0% 14/76 18.4% 102287777 87926778 +3070 chr4 + 190214555 181553303 181553302 181553354 52 TGTGTGTATGTGTATGCGTATATATATATATATACACACACACACACACATA chr4 + 94230402 23247723 23247722 23247774 23247723 23247722 23247774 52 TGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..........:::.::.:.x...:x.:....:........:.........:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 158305580 31908975 +3101 chr4 + 190214555 181563997 181563996 181564057 61 ATGAAAATGATGTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 10164356 10164355 10164416 10164356 10164355 10164416 61 ATAGAACTGATGAGTTCTTTCCTCGATTGTTGTTTTGTTTTTGCTTTTTTTTTTTTTTTTT ..::..x.....xx......:..:xx:.x..x....x.....x.................. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 171399641 18814914 +3103 chr4 + 190214555 181563998 181563997 181564062 65 TGAAAATGATGTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTGAGA chr4 + 94230402 29824360 29824359 29824424 29824360 29824359 29824424 65 TAAAAATGATGCATTCCTTTCCCCTCTTCTCCCTCCTATTTTGCTTCTTCTTTTTCTGTTTTGGA .:.........:x...:....:::....:..::.:..x....x:..:..:.....:.x...x:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 151739638 38474917 +3821 chr4 + 190214555 181586831 181586830 181586999 169 CTCTGTCTCAAAAACAAAACAAAACAAACAAACAAACAAAC-AAACAAAAACAAAAGAAGCAG------ATCATTATTT----------TTTTCTTAAAAGAAATTTCTTA------ACAAAGAATATTATGTTAGGCTG--TTATTGGTCAAT-AACACGTTAATCAGCTCAACCCAAGTACACTTTTCTTTAT chr4 + 94230402 6760476 6760475 6760667 6760476 6760475 6760667 192 CTCTCTCTCAAAAACAAAACAAAACAAACAAAAAAACCCCCAAAACACGAAGAAAGCAAGCAAAAAAACATCACCAGTTAAAACAGCTCTATGTATAAAGtaaatttattatattatatagatattattatattagattaatatattagataataaatatttaGATTATCT---CCCAGGGACTATTTCCCTCAT ....x...........................x....xxx.-.....x:..x...:x.....:------....::.x..----------.x.x:x....:x......x...------.:.:.x.x......:....::.:--x....:.x:...-..:.:x.x:..:.x..---....:.x..xx...:.:.:.. 41M1I21M6I10M10I22M6I23M2I12M1I16M3D21M 119/166 71.7% 192/94230402 0.0% 29/166 17.5% 174826355 15388200 +3080 chr4 + 190214555 181586834 181586833 181586883 50 TGTCTCAAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAACAA chr4 + 94230402 28326068 28326067 28326117 28326068 28326067 28326117 50 TATCTTAAGGACAAAACAAAACAAACCAACAAACAAAATAAGAAAAAAAA .:...:..::................x..........xx..x.....x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 153260766 36953789 +3226 chr4 + 190214555 181605420 181605419 181605595 176 GGCAACAAAGCGAGACACCATCAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAACAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------------AGAGAGAAAGAAAGGAAAGAAAGAA chr4 + 94230402 17246045 17246044 17246228 17246045 17246044 17246228 184 GGTAGTGAATTGAGA----ATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAGAAGAAAGATAAAATGAGAA ..:.:::..x:....----..x..:x:.x..x.::.....:...:..x......x:xxx:....x.:..x:x:..xx..::x.:...xx:..::...:...:.:..:.:xx.xx.:::.:.......:x....x.:x..:....:.::x.:------------..x.....::..::x...:x:.... 15M4D132M12I25M 99/172 57.6% 184/94230402 0.0% 16/172 9.3% 164359375 25855180 +3520 chr4 + 190214555 181605445 181605444 181605556 112 AGAAAGAAAGAG----AGAGAGAGAGAGAGAGAGAAACAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--------AAGAAAGAAAGAAAGAA chr4 + 94230402 51148379 51148378 51148502 51148379 51148378 51148502 124 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGACAGCATTTTGAAGCATGAAGGAAGGGA ........::..----...............:.........::xxx.:.:xx::..x.:..x.x:..::.x:...:.:...:..:....:::..::.x.--------...x.x...:...:.:. 12M4I83M8I17M 74/112 66.1% 124/94230402 0.0% 12/112 10.7% 130457066 59757489 +3018 chr4 + 190214555 181605497 181605496 181605572 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 140493319 49721236 +3115 chr4 + 190214555 181605509 181605508 181605590 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGA chr4 + 94230402 41112178 41112177 41112259 41112178 41112177 41112259 82 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGATAAA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.....:x..:::....x.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 140493331 49721224 +3015 chr4 + 190214555 181605539 181605538 181605602 64 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGA chr4 + 94230402 59054335 59054334 59054398 59054335 59054334 59054398 64 AGAGAAATAGAGAAAGGAAAGGAGAAAAGCAGATAGAGAATGAAGGGAAAAACAAACAGACAAA .:.....x.:......:..:::.....::x...x......x...:.....:.x.:.x...x.:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 122551204 67663351 +3049 chr4 + 190214555 181616262 181616261 181616304 43 CTGTATTAGTAAAGGTTTCCAAAAAAAAAAAAAAAAAAAAGAA chr4 + 94230402 71403915 71403914 71403957 71403915 71403914 71403957 43 CTGTACTAATTAAGCTTTCCAAGAAAAAGAAAAAAAAAAAGAA .....:..:.x...x.......:.....:.............. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 110212347 80002208 +3092 chr4 + 190214555 181616262 181616261 181616313 52 CTGTATTAGTAAAGGTTTCCAAAAAAAAAAAAAAAAAAAAGAACCCATAGAA chr4 + 94230402 71406418 71406417 71406469 71406418 71406417 71406469 52 CTGTACTAATTAAGCTTTCCAAGAAAAAGAAAAAAAAAAAGAAATAATGAAA .....:..:.x...x.......:.....:..............x:x..::.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 110209844 80004711 +3326 chr4 + 190214555 181616280 181616279 181616341 62 CCAAAAAAAAAAAAAAAAAAAAGAACCCATAGAATACACACACACACACACACACACACACA chr4 + 94230402 30589514 30589513 30589575 30589514 30589513 30589575 62 CCAAAAAAAAGAAAGAAAAAAAAAATCCTTATGCTTTACACATGTGCATACACGCACACATA ..........:...:.......:..:..x..x:x.x:.....::::..:....:......:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 151026766 39187789 +3622 chr4 + 190214555 181639600 181639599 181639682 83 CATGGTGGCAGGCCCCTGTGATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--..x.x...::.:...........::........x..x.x...x.:...........:..x:xx:..:..:.. 9M2D72M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 105606403 84608152 +3115 chr4 + 190214555 181641573 181641572 181641611 39 TATATATATATATATATATATGGTGTGTGTGTGTATATA chr4 + 94230402 22934832 22934831 22934870 22934832 22934831 22934870 39 TATATACATACATATATATATAGTGTGTGTGTGCATATA ......:...:..........:...........:..... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 158706741 31507814 +3687 chr4 + 190214555 181651447 181651446 181651592 146 ACATGGTGGCATGTGCCTGTAATCTCAGCTACATGGGAAGCTGAGGCAAGAGAATCACTTGAACCCAGGAGGCTGAGGTTGCAGTGAGCTGAGATCACGCCACTGCACTCC---AGCCTG----------GGTGACAACAGTGAGACTTGGTCTCAAAA chr4 + 94230402 76033196 76033195 76033350 76033196 76033195 76033350 155 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG-AACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAG-CTTGGGGTCACAA ...::....--..::.x....:.::.......x..::.:......x.xx.x...x.............:..x:.x:..:..:..-:.xx...x::..x..x:x..:::x..---......----------......x:...x...-.....xx...x.. 9M2D73M1D26M3I6M10I15M1D13M 98/142 69.0% 155/94230402 0.0% 17/142 12.0% 105618251 84596304 +3006 chr4 + 190214555 181697373 181697372 181697411 39 GGGTTTTTTTGTGTGTTTGTTTTTGTTTTGTTTTGTTTT chr4 + 94230402 60657971 60657970 60658009 60657971 60657970 60658009 39 GGGTTTTTTTGGTTTTTTGTTTTTGTTTTGTTTTGTTTT ...........xx.x........................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 121039402 69175153 +3390 chr4 + 190214555 181698085 181698084 181698156 72 GCGCTTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAAACCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........:.........x.xx.x...x::......x..:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 105664879 84549676 +3377 chr4 + 190214555 181748742 181748741 181748848 107 AAGGCTGTGCTTTAATTAAGCAATAAGACATGACAGGGTGTGAATTATGGAGTAATAATTCTTGTCTAGTATATTGTTAGACAGGAGGCCGAGGGCCAGGTGTCACT chr4 + 94230402 38641833 38641832 38641935 38641833 38641832 38641935 103 AAGGATTTGCTTTCT----GGAATAAGACCTAACAAAGTGTGAATTGTGTTGCATGAGTGCATTTCCAGTGTGGGGTTAGGCAGGAGGTCAAAGGATGAGAGCCATT ....x.x......xx----.x........x.:...::.........:..xx.:.xx.:.x.x.x..:...:.:xx.....:.......:.:.:..x:::.x.:..:. 15M4D88M 68/103 66.0% 103/94230402 0.0% 4/103 3.9% 143106909 47107646 +3553 chr4 + 190214555 181772248 181772247 181772320 73 TGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:...........::........x.xx.x...x::.........:.:..x.xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 105739043 84475512 +3060 chr4 + 190214555 181794673 181794672 181794725 53 TGTGTGTGTGTGTGTGTGTGTGTGTGTACAGCACTTTTTATTACTTTTATTAT chr4 + 94230402 33251003 33251002 33251055 33251003 33251002 33251055 53 TGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTAT .............:.:.:.....:.:..:..x::....xx..::......... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 148543670 41670885 +3179 chr4 + 190214555 181803930 181803929 181804001 72 TTATCTCAACAAAAAAAAAAAAAAGAAAGAAAGAAAGAAA------AAGAAAGGAAAGAAAGAAAGAAAGAGAAAGAT chr4 + 94230402 24148904 24148903 24148981 24148904 24148903 24148981 78 TTATTTTAAGGAAAAAAAAAAAAAGAGAGAGAGAAAAAAATCACTGTGTGAGTGGAAGAAAAAAAAAAAGACAAGTAT ....:.:..x:...............:...:.....:...------x:x:.:x.:......:...:.....x..:x.. 40M6I32M 53/72 73.6% 78/94230402 0.0% 6/72 8.3% 157655026 32559529 +5656 chr4 + 190214555 181803935 181803934 181804204 270 TCAACAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAGGAAAGAAAGAAAGAAAGAGAAAGATAAGGAAGGAAGGAG-----------AAATAGGGAGG----------------------------------------------------------GAGGGTAAGGGAAGGAGGAAGGGAGG--------------------AAGGA-----------------GAGAAAGAGAAAGGAAAGAAAGAAAGAAAGGAAGGGAGGGAGGAAGGAAGGAGAAGGAGGGAGGGAAAGGGAGGGAGGGAGGGAGGGAGGAACCAAGGAAGGAAGGAAAGAAGGAAGGAAAGAAGGGAGGGAGGGAAATAAAAGATG chr4 + 94230402 89572264 89572263 89572629 89572264 89572263 89572629 366 TCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACAATAAAAATGATTAAAAATCTGAAGTTGGAGGGAGGCAATCAAATCAAATAAGGGAATTTAGTTTAATCAAGACATACATATTAAAGTACCCAGTTTAAAATAAACCCTTCAATTAACGGGAAAGAATGCAGGTATGGAGGCTACAGTAATTATTGAAATCAATGAACACGACATCCAACACTgaaaaagagaaagaaaaaaaagaaagaaatgaaag----------ggaatgaaagaaagaaagaaaagagaaagaaggaagaaaaggacaagaaaaggaaataaagGGAAAGGAGGAGAAAGAGGAGGGGAAGGGGAAGGGAAACTG ......:............:.:...:...:....x.:x.....x.x:.x.:...x:.xx.:...xx.:.:.xx...:....-----------.....:..:::----------------------------------------------------------:.x..x..:.:.x.x...x.x.....--------------------..x..-----------------..:..........:...:...........x...:.----------....x..:.:::..::..::..::.:.:.:...:..::.:...x:.:xx......:x..:.::.:.:.::::......:.:.:..:....:..x::..:x.. 81M11I11M58I26M20I5M17I35M10D102M 172/260 66.2% 366/94230402 0.0% 116/260 44.6% 92231671 NA +3249 chr4 + 190214555 181803948 181803947 181804025 78 AAAAAAGAAAGAAAGAAAGAAAAAGAAAGGAAAGAAAGAAAGAAAGAGAAAGATAAGGAAGGAAGGAGAAATAGGGAG chr4 + 94230402 49044737 49044736 49044814 49044737 49044736 49044814 78 AAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAG ...:..::.......:x::....x.....:..........x...:x.....:x.:..:xx:.:.:...::.x.:x... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 132759211 57455344 +3449 chr4 + 190214555 181804120 181804119 181804205 86 GGGAAAGGGAGGGAGGGAGGGAGGGAGGAACCAAGGAAGGAAGGAAAGAAGGAAGGAAAGAAG-----GGAGG------GAGGGAAATAAAAGATGG chr4 + 94230402 1500700 1500699 1500796 1500700 1500699 1500796 97 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaagg ...:...:..:.:.:..x...:..:..:.::x.:..:.:.:......:..:x.:.:....:..-----..:..------.....:......:..x.. 63M5I5M6I18M 60/86 69.8% 97/94230402 0.0% 11/86 12.8% 180303420 9911135 +3373 chr4 + 190214555 181825270 181825269 181825343 74 GTGAGCCTGTACTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x:.x....x.:.........:x.:........x.xx.x...x...........:.:..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 105792066 84422489 +6831 chr4 + 190214555 181834962 181834961 181835109 148 GTCCTTTTTGACTGAGCATTCTGCCTCAGGAAGGACAGACACAGAAGTGTG-GAGGGGAAGGGGGCACCCAACAAGCCAGTAAGATCAGTTGAAAAAACACTAGTGATCCGTGGGGTGGC--TTGTCAAAGCCAGGTCACCCTCAAATTCT chr4 + 94230402 24950392 24950391 24950542 24950392 24950391 24950542 151 GTCCTCTTCGACCAAGCGTGCAGCTTCGGGAGGGACGCACATGGAGCGGTGAGAGAGGAAGGAGACACCCACCTAGCCAGCCAGATCAGCCAAATCAACCCTGGTGATCAATGGGGTGACAGATGTCGCAGCCAGATCGCCCTCACATCCt .....:..:...::...:.x.x..:..:...:....:x...::..:xx...-...:......:.:......x.x......:x.......:::..xx...x..:......x:.......:.--x....:x......:..:......x..:.. 51M1I68M2I29M 107/148 72.3% 151/94230402 0.0% 3/148 2.0% 156884570 33329985 +3579 chr4 + 190214555 181839343 181839342 181839432 90 GGGTATATATATATATAT-------------ATATATATATATATATATATATATACACCTATATACATATATATATACATGTATGCCTATATACATATACAT chr4 + 94230402 25672277 25672276 25672379 25672277 25672276 25672379 103 GGATATATATGTATATATGGCATAAAGAGAAAAATGTGTATGTGAGTGTAGATTTACTAATATGCACATATACACGCATATGCATGCCTGTGTGCATATGCAT ..:.......:.......-------------.x..:.:...:.:x:.:..x..x...xxx...::.......:.:::.:...:......:.:.:.....:... 18M13I72M 63/90 70.0% 103/94230402 0.0% 13/90 14.4% 156167066 34047489 +4104 chr4 + 190214555 181844894 181844893 181845093 200 ATTATGTATGAGTCTT---CGCTTGTTGCATGAACAAACTGCATAGTGT--TCCATTAGTGATTTTCAATTTCATGCTAAGCTTTGCAATTTATTAGTGTTATTTAAGCTAATGTACTATTATTTTGCATATTTTATATA--------------ATTTGTTATTCAT-GCAATGTGATATTTAAGTATTGGGGATCAAT-AAGTCTACTTTGTTTCTAAAT chr4 + 94230402 49888170 49888169 49888390 49888170 49888169 49888390 221 ATGATTTGAGAGTCTTGATTGCCCAGAGCAAGAATGAATTGCATTTTTTGACCCATTAGTGATCTCCAATTTTATGCAAAGTATTGCTGCTTAATTCACTTATTGAGGTTAATATTGAAAAACTTTGCTTACTCTGAATACTTTTCCTCGTGACATTTGCAATTAACAACAGTATGGTAGTAAGAAATGAAAGATCAATAAAGCCTCTCTTATCTTTTAAT ..x..x.:x.......---:..:::xx...x...::..:.....xx.x.--:...........:.:......:....x...:x....x::...x.xxxx.....x.:.:....:.xxx.xx.:.....x..:.:.:x...--------------.....:x...x.:-:..:.:..:..x.x.::x..x:::.......-...:..x::..:.:.:.x... 16M3I30M2I89M14I13M1I31M1I21M 128/200 64.0% 221/94230402 0.0% 21/200 10.5% 131956724 58257831 +3222 chr4 + 190214555 181849926 181849925 181849965 40 CTCTTTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..:::..................x................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 106601877 83612678 +3689 chr4 + 190214555 181849928 181849927 181849967 40 CTTTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ...:.................................... 40M 39/40 97.5% 40/94230402 0.0% 0/40 0.0% 106601879 83612676 +3218 chr4 + 190214555 181849930 181849929 181849990 61 TTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACAGAG chr4 + 94230402 75248047 75248046 75248107 75248047 75248046 75248107 61 TCCTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagagagagagagagagagag .:..::...............x.x..................x.x.x.x.x.x.x.x.... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 106601883 83612672 +3002 chr4 + 190214555 181849931 181849930 181849965 35 TCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601305 12601304 12601339 12601305 12601304 12601339 35 TCTCTCTCTCTCTCTCTCACACACGCACACACACA ..................x.....:.......... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 169248626 20965929 +3253 chr4 + 190214555 181849931 181849930 181849969 39 TCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::.................x.................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 106601881 83612674 +3316 chr4 + 190214555 181849932 181849931 181849967 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 169248628 20965927 +3102 chr4 + 190214555 181849934 181849933 181849969 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 169248630 20965925 +3251 chr4 + 190214555 181855936 181855935 181856023 88 GGAAGAAGAAAGAAGGAAGGAACAAAAGGAGGAAGGAAAAG--------AGGGAGGAAAGAAGGAGGGAAGGAAGGAA---GGAAGGAAAGGGAAAGAA chr4 + 94230402 13662778 13662777 13662876 13662778 13662777 13662876 99 GGAGATGGTAAGCAGGAAGGAAGCAAAGGAGGAGGAAAAAGTTCTTTTAAAGAAGGCAAACATGAGGAAAGGATGTAAATGGAAAAGAAAGGGTGAGGA ...::x:.x...x.........xx.........:.:.....--------.:.:...x..:x.x....:.....x.x..---.:..:.......x:..:. 41M8I29M3I18M 64/88 72.7% 99/94230402 0.0% 11/88 12.5% 168193158 22021397 +3636 chr4 + 190214555 181855951 181855950 181856160 210 GAAGGAACAAAAGGAGGAAGGAAAAGAGGGAGGAAAGAAGGAGGGAAGGAAGGAAGGAAGGA----AAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAGGAAAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAGGAAGGAAAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAAGAAGGAAGAAGGAAGGAAGGAAGGAAAGGGAA chr4 + 94230402 65771126 65771125 65771335 65771126 65771125 65771335 210 GAAAAAGGCAGAGGAACAGGGTAAATAAAGATAGAAACATCAGGTAGGGCCAGCAAGAAATACCTTAGAAGACTGAGGAAAAAAAGAGAATAA--AAGAGAGAAAAGCACAAAAATCAGAGGAAAGAAGAATTA--GAGTGAAAACAGATGTTAGGAGGAAGGGAGAGAACAAGCAAGGAGTACAGAAAGCAATAATAAAGTCAGTAAAAAAAA ...::.:xx.:....:x.:..x...x.::..x::..:x.xx...x.:..xx:.x.:...:x.----.:::..xx..:.:..::..::...x..--...::..:....x:x..:..xx.::.:..:......xx.--..:x...::x.::x.xx..:.......:.::...x...x.....:x:x..:...x.:x..x:...xx..x...:::.. 62M4I27M2D39M2D78M 118/206 57.3% 210/94230402 0.0% 8/206 3.9% 116084825 74129730 +3522 chr4 + 190214555 181856010 181856009 181856103 94 GGAAAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAGGAAAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAGGAAGGAAAGGGAAAGAA chr4 + 94230402 58935720 58935719 58935813 58935720 58935719 58935813 94 GGGAATGAGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAA ..:..x.::.....::x..x:.xx:.:...::.x.:.::.:....:...x...:...x...........:..x:.x.x....:..::::.:... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% 122920290 67294265 +3035 chr4 + 190214555 181857554 181857553 181857608 55 AAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAAACAAACACA chr4 + 94230402 78347546 78347545 78347600 78347546 78347545 78347600 55 AACAAAAGAAAAAACCATGAAAAACAACAAAACAAACAAGAAAAAAACCAACACA ..x....:......xx.x:...x.x...........x..:........x...... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 103510008 86704547 +3514 chr4 + 190214555 181873762 181873761 181873821 60 GTGTGTGTGGTTTTTTGTTTTTTGTGTTTATTTGTTTGTTTGTTTTGTTTTGAGATGGAG chr4 + 94230402 33814288 33814287 33814347 33814288 33814287 33814347 60 GTTTGTGGGGTTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGGAACAGGG ..x....x........x.....x.xx...x......................::.::.:. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 148059474 42155081 +3419 chr4 + 190214555 181888496 181888495 181888562 67 ATATATATATATATATATATGTATATATATACATATATGTGTATATATATATATGTATATATATACA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:..:.:..:..:.:....x::.:..:.x...:.....x......:.......xxx......... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 135825197 54389358 +3147 chr4 + 190214555 181888572 181888571 181888622 51 ATATATACATATATATATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAA chr4 + 94230402 6857610 6857609 6857660 6857610 6857609 6857660 51 ATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTGGAAA ........:..:...::.:::x:.........x...........x...... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 175030962 15183593 +3326 chr4 + 190214555 181899466 181899465 181899554 89 ACAACAATTTTTAAACTAATTTTACCCAATTCTTTATGTGGGTTTTTTCTTTTATTTGTTTTGTTGTTTTGTTGTTTTGTTTTTTGTTT chr4 + 94230402 62522672 62522671 62522760 62522672 62522671 62522760 89 ACAACAAAGACTAAGCAACTTTCACTTGACTTGTTGTGGGTGTTTGTGTATGTGTTGGTTTTTTTTTTTTGTTGTTTTGTTTATTTTTT .......xxx:...:.x.x...:..:::.:.:x..:..x.x....x.x:x.x.:..x.....x..x................x..x... 89M 61/89 68.5% 89/94230402 0.0% 0/89 0.0% 119376794 70837761 +3058 chr4 + 190214555 181899503 181899502 181899571 69 GTGGGTTTTTTCTTTTATTTGTTTTGTTGTTTTGTTGTTTTGTTTTTTGTTTTGTTTTGTTTTTTGTTT chr4 + 94230402 77840991 77840990 77841059 77840991 77840990 77841059 69 GTAGGTTTTTTCTTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGATGATTATTTCTTTTACTT ..:.............x..xx.x.........x....x........x.xxx.x:..x.x.:....::.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 104058512 86156043 +3702 chr4 + 190214555 181910408 181910407 181910489 82 TACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCA----ATGA-GCCAAG chr4 + 94230402 76033205 76033204 76033291 76033205 76033204 76033291 87 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAG .:...x......:...........::........x.xx.x...x..........::.:..x.xx:..:..:.----....-...... 72M4I4M1I6M 63/82 76.8% 87/94230402 0.0% 5/82 6.1% 105877203 84337352 +3490 chr4 + 190214555 181915618 181915617 181915746 129 GAAAGAAAGGAATGCAAGAAA-GGAGAGAGGAG-------AAGCAGAGAGGGGAGGGGAGGACGG--AAGGGGAGGGGAAGGGGGGAGGGGAGGAGAGAAAAGAGGAGGGGAGAGGAGAGGAGAGGAGAACACAGAAGA chr4 + 94230402 32265483 32265482 32265621 32265483 32265482 32265621 139 GATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGA ..x.::::..:.....:.:.:-:x:........-------:..x..x.x.:..:......xx...--....:..:x.x.x.x.x:.x..:::.:...:..:.......:.......:::...:::::...x.:.:x... 21M1I11M7I25M2I72M 81/129 62.8% 139/94230402 0.0% 10/129 7.8% 149650135 40564420 +3334 chr4 + 190214555 181916737 181916736 181916819 83 CATGGTGGCGCGTGCTCGTAATCCCAGCTACTTGGAAGGCTGAGACAGGAGAATCGTTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:..::.:--...:.:...........:.........x.xx.x...x.::.......::.:..x:xx:..:..:.. 15M2D66M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 105883540 84331015 +3279 chr4 + 190214555 181959033 181959032 181959089 57 GTTTTTTGTTGTTGTTGTTTGTTTGGTTTGGTGAATCGATTATTATTAATTTTAGTT chr4 + 94230402 66252783 66252782 66252839 66252783 66252782 66252839 57 GTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTAAATCTGGTTTCTATTAATTCTATTT .........................x....xx:.x::.:..x:........:..x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 115706250 74508305 +3264 chr4 + 190214555 181959034 181959033 181959089 56 TTTTTTGTTGTTGTTGTTTGTTTGGTTTGGTGAATCGATTATTATTAATTTTAGTT chr4 + 94230402 77841004 77841003 77841059 77841004 77841003 77841059 56 TTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGATGATTATTTCTTTTACTT ....................x........x.xx:.:...x......xx.....x.. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 104118030 86096525 +3228 chr4 + 190214555 181968958 181968957 181969028 71 TCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATACATATATATGTGTGTGTGTGTATGCCTCTG chr4 + 94230402 26578261 26578260 26578331 26578261 26578260 26578331 71 TCTAATTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTGGTATGTATGTCTGTACGTGTGGAATTCCCTCTG ...x:.:...................:.:.:.:.:.xx:..::...:.x...::.....x:xx.x...... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 155390697 34823858 +6964 chr4 + 190214555 181970422 181970421 181970636 215 CCCAACTATCAAGATAAAAGAAAAAAAATACTCTTTTGTCTATCGTCTTGAAACTTTCACTTCCTGTGGTTCAGTCTGAAAGATAATGCATCTGCTTAACATCAAGCAGTTTTTAGAACTCTCCTTGAGAATT----TTTCCAC---------CATCAGTGATTCATAACCACCTCCTTTATGTGATCGTATGATATATCTTTTAAAGTCTACATTTTAAAGTTATTT chr4 + 94230402 41931064 41931063 41931286 41931064 41931063 41931286 223 CCCAAGAGTCACAATAAAAGGAGAACAGAATT--TCTGGATTCTGACTTAAAATTCCAGCTCCCTAAGGCTTAACCTTAAGCATGAT--ATGTGTTTAACATCAAGCAGTTTTTAGAACTCTCCTTGAGATTTCCCCCTTCCACTCCTGGCTTTCTCCATGATTCATGA-TATACTCTCTATCTGCTCACACGGTGAATCTTTTGAAGTTCAGATTTTTAAGTTGTCT .....xx:...x:.......:.:..x.:x.:.--.:..xx.x::.x...:...:.::x:..:...:x..:.:.::..x..:x..:..--..x..:...................................x..----:......---------:x..x:........:.-:.:x::..:...x..x..::.:.:.:x.......:....::.x.....x.....:.:. 32M2D53M2D44M4I7M9I16M1D58M 145/210 69.0% 223/94230402 0.0% 18/210 8.6% 140039358 50175197 +3778 chr4 + 190214555 181979097 181979096 181979181 85 CATATATATATATATATATATATAT--------------------ATATATATATATATATATATATATATATATATATGACATCTTTGGTTGACTACCATGGTA chr4 + 94230402 24973637 24973636 24973741 24973637 24973636 24973741 105 catatatatatatttatgtgtgtgtgtgtctgtgtgtgcacatccatATATCCATCTATATCCATATATATATATATGTAAAATCTTTGGTTCAATCTCATAATA .............x...:.:.:.:.--------------------......x:..x.....x:..............:.:.x..........x.x.x:...::.. 25M20I60M 66/85 77.6% 105/94230402 0.0% 20/85 23.5% 157005460 33209095 +3223 chr4 + 190214555 181995159 181995158 181995232 74 GTTCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGGGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x...x....:.:...........::........x.xx.x...xx:.........:.::.x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 105961955 84252600 +3520 chr4 + 190214555 182014050 182014049 182014220 171 ATACGTGTATATACGTATATACAC--ATATATACGTATATATACGTGTAT---ATACG------------TATAT---ACACATATATACGTATATATACATATACACACACATATATACTTAT------------ATATATACATATATATACATA-------TATATATGTGTGTGTATATATATATATAAAGTGTTAAAACTGTTGG chr4 + 94230402 54005610 54005609 54005818 54005610 54005609 54005818 209 ACATGTGTGTAAACATATAGACAACAACATTTAGTTACTTATGTGTGTAATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTATTAGCTTTATACATGTGCTAGTTTGTGTGTTTA-ATTCTGACAAAGCTGTTAG .:.:....:..x..:....x...x--.:..x..xx..:x...::.....x---..:.:------------.....---........:..:x............:.........:.x.x.::.:.------------.x.xx.......:....x:..-------....:.....:xx..x.:.:.:.x..-.xxx..x:...:.....:. 24M2I24M3I5M12I5M3I46M12I21M7I26M1D19M 120/170 70.6% 209/94230402 0.0% 40/170 23.5% 128008440 62206115 +3457 chr4 + 190214555 182014105 182014104 182014176 72 TATACACATATATACGTATATATACATATACACACACATATATACTTATATATATACATATATATACATATA chr4 + 94230402 91331310 91331309 91331381 91331310 91331309 91331381 72 TATATACATATATATGATTACATACATATACACAAAATCATGCATTTGAATATATACATGcatacaatcata ....:.........:.xx..:.............x.xx:..::.:..:x..........::...:.xx:... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 90682795 NA +3119 chr4 + 190214555 182014118 182014117 182014182 65 ACGTATATATACATATACACACACATATATACTTATATATATACATATATATACATATATATATG chr4 + 94230402 89823929 89823928 89823993 89823929 89823928 89823993 65 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATG ..x.......:x...:.........:.:.:.......xx....:...::...x.xx.xx...... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 92190189 NA +3156 chr4 + 190214555 182014134 182014133 182014242 109 ACACACACATATATACTTATATATATACATATATATACATATATATATGTGTGTGTATATATATATATA-AAGTGTTA-----------AAACTGTTGGTACCCTG----AAATTAGTAAAATTG chr4 + 94230402 22600198 22600197 22600322 22600198 22600197 22600322 125 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTGATAGTGAAAATCCTGATCTGCTTCTACTTTGTTCCAAATTAGAAAACCTG .......:..x:.:.:x:.x.:.:..:....:.x.x.:..:.....x.............::..::.::-.....x..-----------:.x...:.xx...::..----.......x...x:.. 69M1I8M11I17M4I15M 75/109 68.8% 125/94230402 0.0% 16/109 14.7% 159413936 30800619 +3187 chr4 + 190214555 182020242 182020241 182020308 67 TGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.::..........::........x.xx.x...x::...........:..x:xx:..:..:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 105987031 84227524 +3687 chr4 + 190214555 182040188 182040187 182040356 169 GGAGAAGAGGGCAGGGGAGGGGAGGGGAGAAGAGGGCAGGGGAGGGGAGGGCAGAAGAGGGCAGGGGAGGGGAGGGGAGAAGAGGGCAGGGGAGGAGAGGGGAGAGGAGAGGAGAGGGAGAAGGAAGGGACAAAGGCAGGAAAGGGCTTAATCAATCAATTGAACACAG chr4 + 94230402 32265482 32265481 32265650 32265482 32265481 32265650 169 GGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAG ...x...:...x.x.x::..:.x:x.....:...xx:xx.x....:.x.x.x:.::.:.:..xx...:::....::x:x.x.x.x:xx..:::.:...:::...................:::::.:...x..x:::..::..:x:xx.x.x..::::...x:.x.... 169M 92/169 54.4% 169/94230402 0.0% 0/169 0.0% 149774706 40439849 +3548 chr4 + 190214555 182040256 182040255 182040319 64 GGGGAGGGGAGAAGAGGGCAGGGGAGGAGAGGGGAGAGGAGAGGAGAGGGAGAAGGAAGGGACA chr4 + 94230402 24028141 24028140 24028204 24028141 24028140 24028204 64 GAGAAAAGGAAAATTGGGAAGGGGGGGAGGGGGGAGAAGAGAGAAGAGAGAAGAAGCAGAGACA .:.:.::...:..xx...x.....:....:.......:.....:....:..::.:.x..:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 158012115 32202440 +3605 chr4 + 190214555 182044222 182044221 182044289 68 TTGGAAAAGCACAAAAAAAGAAAAGAAAAAAACACACACCAACAAAAAGAAAGGAAAGAACTTCAAAA chr4 + 94230402 54830722 54830721 54830789 54830722 54830721 54830789 68 TTAGAAACAAACAAACAAAAAAAAAAAAAACCCACACACTTAAAAAAAGAAAGAAAGAAACTCTAAAA ..:....x:x.....x...:....:.....xx.......:x.x..........:..::....::.... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 127213500 63001055 +3073 chr4 + 190214555 182052855 182052854 182052924 70 TGAGGTTCCAGCTTTAAAAGGTGTCCTAAAAATCTGATGAACTTTTGTGTTTGTATATTTCATTGCGTTT chr4 + 94230402 44262655 44262654 44262724 44262655 44262654 44262724 70 TGAAACTACAGCTGTAAAAGTAATTCTGAGATGTTGATAAGTTTCTGGGTTTGTGTATTCCATTACATTT ...:::.x.....x......xx:.:..:.:.xx:....:.::..:..x......:....:....:.:... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 137790200 52424355 +3151 chr4 + 190214555 182057364 182057363 182057428 65 ACCCAAATCTTTCTTTATCTTTTATCTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTAAGA chr4 + 94230402 65932354 65932353 65932418 65932354 65932353 65932418 65 ATCCATATATTTCTGTAATTTTTTTCTGTTATCTCCTTGCTTTTTTTTTTTGTTTTTTTTCATGA .:...x..x.....x..x:....x...x..x.:..:..x.....:......x........:.x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 116125010 74089545 +3054 chr4 + 190214555 182058917 182058916 182058979 63 ACAAAGTTTTGAGGAATAAGTCATAGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 66596155 66596154 66596217 66596155 66596154 66596217 63 ATAGAGCTTTCAAGAAGAAATCTTAGAGCGTGTGTGCGTGTGTGTGTGTTTGGGATTGTGCAT .:.:..:...x.:...x..:..x...xx........:............x..x.xx....::. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 115462762 74751793 +3300 chr4 + 190214555 182059792 182059791 182059892 101 ACATGGTAGTGCACACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGGATCAATTGAGCCCAGGAG---------GTGGAGGATGGGGTTAGCCATGATTGTGCC chr4 + 94230402 76033196 76033195 76033303 76033196 76033195 76033303 108 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCC ...::..:......:--......:.........:x::........x.xx.x.:.x..x....:.....:..---------..:..:x...:x.::.:x..x:xx...... 15M2D54M9I30M 68/99 68.7% 108/94230402 0.0% 11/99 11.1% 106026596 84187959 +3202 chr4 + 190214555 182071928 182071927 182071966 39 TCTAAAAACCAAAACCAAAACAAAACAAAACAAAAAAAA chr4 + 94230402 6034741 6034740 6034779 6034741 6034740 6034779 39 TCTTAAAACCAAAACCAAACCAAAACAAAACAAAAAAAA ...x...............x................... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 176037187 14177368 +3007 chr4 + 190214555 182071938 182071937 182071975 38 AAAACCAAAACAAAACAAAACAAAAAAAACACTAACCT chr4 + 94230402 36318929 36318928 36318966 36318929 36318928 36318966 38 AAAACCAAACCAAACCAAAACAAAAAAAGCACTAACCT .........x....x.............:......... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 145753009 44461546 +3570 chr4 + 190214555 182078391 182078390 182078464 74 GTGCACCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCTGGGAGGTGGAGATTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.x....:...........::........x.xx.x...x.:........::.:..x.xx:.::..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 106045187 84169368 +3071 chr4 + 190214555 182100440 182100439 182100491 52 AAAAAAAAAATATATATATATATATATACACACACACACACACATATATATA chr4 + 94230402 74671066 74671065 74671117 74671066 74671065 74671117 52 AAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA .....xx.:x.:..............................x.x.x.x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 107429374 82785181 +3070 chr4 + 190214555 182100443 182100442 182100489 47 AAAAAAATATATATATATATATATACACACACACACACACATATATA chr4 + 94230402 25262931 25262930 25262977 25262931 25262930 25262977 47 AAAAAAGTAAATATATGTATATTTACACATATACTTACACATATATA ......:..x......:.....x......:.:..x:........... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 156837512 33377043 +3077 chr4 + 190214555 182100454 182100453 182100516 63 TATATATATATATACACACACACACACACATATATATATATACACACACACACATATATATAC chr4 + 94230402 89823932 89823931 89823994 89823932 89823931 89823994 63 TATATATGGATACACACACACACACACACTTATAACTATATATACGTATTCTGAGTTATATGC .......:x...:................x....xx......:..::.:x.xx.xx.....:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 92276522 NA +3122 chr4 + 190214555 182100460 182100459 182100527 68 TATATATACACACACACACACACATATATATATATACACACACACACATATATATACACACATATATA chr4 + 94230402 54963193 54963192 54963260 54963193 54963192 54963260 68 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATA .:.....x..:...x.::.....x......:.:.:.....xx...::::::x:..........x.... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 127137267 63077288 +3081 chr4 + 190214555 182100493 182100492 182100545 53 ATACACACACACACATATATATACACACATATATATACACACATATATATATA chr4 + 94230402 74526074 74526073 74526126 74526074 74526073 74526126 53 ATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTA ..x............:..:x.:.:.....x........::.:....:...x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 107574419 82640136 +3010 chr4 + 190214555 182100521 182100520 182100571 51 ATATATATACACACATATATATATACACACACATATATATACACACATATA chr4 + 94230402 46140856 46140855 46140906 46140856 46140855 46140906 51 ATATATATACACACACTCTCACATACACACACGTGTATATACAGACTTACA ...............:x:x:.:..........:.:........x..x..:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 135959665 54254890 +3114 chr4 + 190214555 182100583 182100582 182100630 48 ATATACACATATATACACATATATACACACATATATATACACACACAT chr4 + 94230402 50629533 50629532 50629580 50629533 50629532 50629580 48 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACAT .....:..x......x.:..:...........:..x.......x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 131471050 58743505 +3175 chr4 + 190214555 182100592 182100591 182100658 67 TATATACACATATATACACACATATATATACACACACATATATACACATATATATACACATATATAC chr4 + 94230402 54963195 54963194 54963261 54963195 54963194 54963261 67 TATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATAC .....x..:.:.x..:.....x......:.........xx:.::::.::x:...:......x..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 127137397 63077158 +3041 chr4 + 190214555 182100647 182100646 182100717 71 ACACATATATACACATATATACACATATATATACACACATATATATACACACATATATATACACACATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .....:....x.....::.x......::...:.x.x.:..:.....x::::::.:.....:..::..::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 159500449 30714106 +3032 chr4 + 190214555 182100676 182100675 182100766 91 TATACACACATATATATACACACATATATATACACACATATATATACACACATATATACACATATATATACACACATATATATACACATAT chr4 + 94230402 54963193 54963192 54963283 54963193 54963192 54963283 91 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .:..:.:x....:.x..:.....x......:.......:.xx:.::::.:.x:...:......x....::x.xx:x.x.x.x....:.:.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 127137483 63077072 +3154 chr4 + 190214555 182100690 182100689 182100780 91 TATACACACATATATATACACACATATATATACACACATATATACACATATATATACACACATATATATACACATATATATACACATATAT chr4 + 94230402 54963193 54963192 54963283 54963193 54963192 54963283 91 TGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACATCTATACGGAATTCTTTCTTTACATACAT .:..:.:x....:.x..:.....x......:.......:.xx:..::::::x:..........x....::x.xx.x.x.x.x:.....:.. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 127137497 63077058 +3139 chr4 + 190214555 182100706 182100705 182100793 88 TACACACATATATATACACACATATATACACATATATATACACACATATATATACACATATATATACACATATATATACACATATATA chr4 + 94230402 44164824 44164823 44164910 44164824 44164823 44164910 87 TACTTACACGTAGAT-CTCTCATATATACGCATGTATACACACAAATGTTTGTACGCATGTACTCAGACATAAAAGAAAGCAAATATA ...x:...::..x..-.x.x.........:...:....:.....x..:.x.:...:...:..:x:.x.....x.x:x.x:..x..... 15M1D72M 60/87 69.0% 87/94230402 0.0% 1/87 1.1% 137935882 52278673 +3055 chr4 + 190214555 182100835 182100834 182100884 50 ATATACTCATATATATATATATACTCATATATATATATATAGAGAGAGAG chr4 + 94230402 81165031 81165030 81165080 81165031 81165030 81165080 50 ATATATACAAATATATATGTATTCTAATTTATATGTATATAAAGAGAGAG .....:x..x........:...x..x..x.....:......:........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 100935804 89278751 +3442 chr4 + 190214555 182101063 182101062 182101219 157 AGGAAAAGAAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAA----GAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGGAGG--GAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGG chr4 + 94230402 61867102 61867101 61867262 61867102 61867101 61867262 161 AGAAAAGGAAAAGCATGTCTAAAAGTAGAGAGCTAGGCGAGAAGAAATCAGAAGTGGAAGGAAGATAAGAAGGCAGGAAG--AAGATGGGAGGTCTGGGCAGGAAGGCCCAGAGACACTGAGACAAAAGGGCAGCAGGAAAAGATATGAAGGAATGAGAAGAG ..:...:....:.x.x.xxx::.:.x..:...xx...x::.:..:..xx.:.----........:x.......x......--....x......--x:..x.....:.xxx:...:x.xx:..:x..:.:..x..x::.:..:..x.x:.:...:x...:.::. 52M4I24M2D11M2I68M 96/155 61.9% 161/94230402 0.0% 8/155 5.2% 120233961 69980594 +3340 chr4 + 190214555 182101075 182101074 182101174 100 GAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAAGAAGGAAGGAAAGAAG--GAAGGAAGGAA--AGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAG chr4 + 94230402 890669 890668 890770 890669 890668 890770 102 GAGAGGGGGCAGAGGAAGAGGGAGGGTAGAAGGAAGAAGTGGATGGAGAAAAGAGAGCGCAGGGAGAAACCAGAGGTGATGGAGGA--GAGTGGATGGGGGGAG ..::..:..x..:.:::.........x:.:......:.:x.:.x.:..:.....::--.x...:..:..--...:.x..x......--..:x.:.x..:..... 56M2I11M2I15M2D16M 67/98 68.4% 102/94230402 0.0% 6/98 6.1% 181210406 9004149 +8769 chr4 + 190214555 182101115 182101114 182101358 244 GAAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAG----------------GAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAA--GGAAAGAAGGGAGGGAGGAAGGAAAGAAG-GGAGGGAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAAA----GAATGGAGGGAGGA---AGGAAAAAAGGAAGGAAGAAAGGGAG chr4 + 94230402 1500703 1500702 1500971 1500703 1500702 1500971 269 GAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaa-gaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG ....::.:.....:x..::.....:.:x..:....:.......::...x.:.::.:....----------------..:..:..x..:...:...::.x.....:..:::..::..:..--.....x.:::....:.::....:::.::.-....:.:::::.....:...:..:x:::..........:.::.....-..:.:.....::::..:...:...----...x.:.....::.---....:::..x.....::....:.:.. 60M16I43M2I29M1I47M1D24M4I14M3I26M 161/243 66.3% 269/94230402 0.0% 27/243 11.1% 180600412 9614143 +9275 chr4 + 190214555 182101134 182101133 182101366 233 GGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAG----------------GAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGA--------------AGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGAAGGAAGGAA-----AGAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAAAGAATGGAGGGAGGAAGGAAAAA--AGGAAGGAAGAAAGGGAGGGAGGGAG chr4 + 94230402 1500702 1500701 1500971 1500702 1500701 1500971 270 GGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAG .....::.....:..x...:.....:.:x..:....:.......::...x.:.::.:....----------------..:..:..x..:...:...::.x.....:..:::..::..:.--------------......:.....:...:.::::..:::.:..:.::..:...-----....:.:....:.:.......::.:::..:......::.:.:..:x.:.::..:.:.......--....:....x:.....:.::.:.:.. 61M16I42M14I41M5I63M2I26M 157/233 67.4% 270/94230402 0.0% 37/233 15.9% 180600432 9614123 +8673 chr4 + 190214555 182101152 182101151 182101387 236 GAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAG----------------GAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGA--------------AGGAAAGAAGGAAGGAAGGAAAGAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAAAGAATGGAGGGAGGAAGGAAAAAAGGAA----GGAAGAAAGGGA------GGGAGGGAGGGAAGGAAGGAAGGAATCTTC chr4 + 94230402 1500700 1500699 1500975 1500700 1500699 1500975 276 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAAACAGGAGGGAACGAAGGGGGAAAAGAAGCTCC .:.....::.....:..x...:.....:.:x..:....:.......::...x.:.::.:....----------------..:..:..x..:...:...::.x.....:..:::..::..:.--------------......:....::..::.:::...:.:::....::..:...::x..::::::...::......:.x.::.:::....:::......:..----....::......------:.......:x.....::.:..:...x..:. 63M16I42M14I89M4I12M6I30M 155/236 65.7% 276/94230402 0.0% 40/236 16.9% 180600452 9614103 +8147 chr4 + 190214555 182101172 182101171 182101382 211 GAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAG----------------GAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGAAGGAAGGAAA--------------GAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAA-----AGAATGGAGGGAGGAAGGAAAAAAGGAAGGAAGAAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAA chr4 + 94230402 1500700 1500699 1500943 1500700 1500699 1500943 244 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaagg--aagaggaagggaaaagaaaAAGAAAACTGGGAAAGAAGGGAAAAA .:.....::.....:..x...:.....:.:x..:....:.......::...x.:.::.:....----------------..:..:..x..:...:...::.x.....:..::...:...:...--------------...:::....:..::.::::....:....:..:..:...-----....x.:....:.:....--..:.......:.:..::::.:.:.::xx.....:.....:.::.. 63M16I44M14I39M5I18M2D45M 143/209 68.4% 244/94230402 0.0% 37/209 17.7% 180600472 9614083 +7245 chr4 + 190214555 182101192 182101191 182101382 191 GAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAA-----------------GGAAAGAAGGAAGGAA---GGAAAGAAGGGAGGGAGGAA--GGAAGGAGGGAGGGAAAGAAGGAAAGAATGGAGGGAGGAAGGAAAAAAGGAAGGAAGAAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAA chr4 + 94230402 1500700 1500699 1500910 1500700 1500699 1500910 211 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaaaagaaaatggagaaagaagggggaaaggaag--aggaaggga .:.....::.....:..x...:.....:.:x..:....:.......::...x.:.::.:....:..-----------------....x:..........---.....:..:::..::..:..--....:x..::::.....:....:::.::x:.::.::.:.:..:.....:...::x:..:.::..:..:..:.:.....--.......:. 66M17I16M3I20M2I78M2D9M 127/189 67.2% 211/94230402 0.0% 24/189 12.7% 180600492 9614063 +6907 chr4 + 190214555 182101212 182101211 182101382 171 GAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGGAGGGAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAAAGAATGGAGGGAGGAAGGAAAAAAGGAAGGAAGAAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAA chr4 + 94230402 1500700 1500699 1500870 1500700 1500699 1500870 171 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatggaaaaaaaaaagaaagaaaatggaaatagaagaggaaaaaagggggggggaggagaggaaggggaaaa .:.....::.....:..x...:.....:.:x..:....:.......::...x.:.:..:.:..:..x:::...x.:x.x..:..:.:x.::.:::.:..:.x.....:..x::..::..:..:x::...x:....::::...::.:...:......::.......::::.. 171M 105/171 61.4% 171/94230402 0.0% 0/171 0.0% 180600512 9614043 +3048 chr4 + 190214555 182114371 182114370 182114431 61 TCCCCTCGCTTTTTCTCCTCTTCCTCCTCCTCCTTCTTCATTTTATTTATGTATTTATTTT chr4 + 94230402 15335367 15335366 15335427 15335367 15335366 15335427 61 TCACTTCGTACTCTCTTTTCTTCCTCCTCCTCTTTCTGTGCTTTTTTTGTTTGTTTGTTTT ..x.:...:x:.:...::..............:....x:::...x...:.x.:...:.... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 166779004 23435551 +3154 chr4 + 190214555 182150217 182150216 182150260 44 AAAGGAAAAGAGGAAGGGAGGGGAGTAAGAGAAAGAGAGAGAAA chr4 + 94230402 62475714 62475713 62475757 62475714 62475713 62475757 44 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAA ...:.:...:.::.....:.....:.:................. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 119674503 70540052 +3146 chr4 + 190214555 182161552 182161551 182161643 92 ACTCCAGCCTGGGCAACAGAGTTGAGGCTCAGTCCAAATATATATATACATATATATATATGTATATATATATACAAATATATATATGTATA chr4 + 94230402 62941886 62941885 62941976 62941886 62941885 62941976 91 ATCCCAGGTCGTGCTTTAGAGTTGAGCCTTATTCCAAATAAATATATGCATATGGATGTATTTTTACATTAACAGACAT-TATGAAGGTATA .::....x::.x..xx:.........x..:.x........x......:.....:x..:...x.x..:..xx.:.x.x..-...:x.x..... 79M1D12M 63/91 69.2% 91/94230402 0.0% 1/91 1.1% 119219666 70994889 +3092 chr4 + 190214555 182161588 182161587 182161709 122 AATATATATATACATATATATATA-TGTATATATA-TATACAAAT--------ATATATATGTATATATATATATACACACACACAAATATATATATGTATATATATACACAAATATATATGTATATATATA chr4 + 94230402 54005635 54005634 54005766 54005635 54005634 54005766 132 AACATTTAGTTACTTATGTGTGTAATGAATGCAGAATCAACAAATTATATTGAACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTA ..:..x..xx...x...:.:.:..-..x..::.x.-.xx......--------.:.:........x........:.:.........x.:.x.x..x...x:xxx.::...x...xx..:..:.:....x:.. 24M1I10M1I9M8I79M 83/122 68.0% 132/94230402 0.0% 10/122 8.2% 128155953 62058602 +3198 chr4 + 190214555 182161628 182161627 182161751 124 AATATATATATGTATATATATATATACACACACACAAATATATATATGTATATATATACACAAATATATATGTATATATATACATATATATGTGTATATATATATACACAAATATATGTGTATA chr4 + 94230402 54005687 54005686 54005799 54005687 54005686 54005799 113 AACACATATGTATTTATATATACATACACACACACACAGAAATCTGTCCTGTTGCACAAAAAGTTACATATGTATAAGTAT-----------TAGCTTTATACATGTGCTAGTTTGTGTGTTTA ..:.:....:.:.x........:.............x.x.x..x.:.x:xxx.::.:.x.x.:x..:.........x:...-----------.:xx.x....:..:::.x.:.x.:.....x.. 81M11D32M 74/113 65.5% 113/94230402 0.0% 11/113 9.7% 128155941 62058614 +3101 chr4 + 190214555 182161713 182161712 182161779 67 ATATATGTGTATATATATATACACAAATATATGTGTATATATATACATATATATGTGTATATATATA chr4 + 94230402 46063299 46063298 46063365 46063299 46063298 46063365 67 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ...:.......:..:.:...:x:..x..:.x::.....:.x....:.:.......xxx.......:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 136098414 54116141 +3330 chr4 + 190214555 182161730 182161729 182161872 143 TATACACAAATATATGTGTATATATATACATATATATGTGTATATATATATACACAAATATATGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGT chr4 + 94230402 89812949 89812948 89813085 89812949 89812948 89813085 137 TATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACTCCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT---CTCAAGTTTTTATGAACAGGCATGT ....:::x.:.:.x....---::.....x...x............x..x..:.x:x....:....::.x.:x:x..::::...:.x:x.:.:.:.:::::.........x..x..---.x...:.x.x....x::.x::.... 18M3D94M3D25M 84/137 61.3% 137/94230402 0.0% 6/137 4.4% 92348781 NA +3061 chr4 + 190214555 182161758 182161757 182161825 68 CATATATATGTGTATATATATATACACAAATATATGTATATATATACACATATATATGTATATATATA chr4 + 94230402 46063298 46063297 46063365 46063298 46063297 46063365 68 CATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACA ....:..:...::..:.:...:x:....x:.x:......:.x....:........:xxx.......:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 136098460 54116095 +3180 chr4 + 190214555 182161761 182161760 182161885 125 ATATATGTGTATATATATATACACAAATATATGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTATATATATACA chr4 + 94230402 76376858 76376857 76376971 76376858 76376857 76376971 114 ATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATA------AACAGATAGAGAAA-----ATGTGCCTCTCTGTGTGCTTGTTTACA ..::..::x.x.x..:....:..x.....:......::...:.x.xx..:x.:......:....:::......------x.:.x...x.x...-----.....:x.x.x.....::x.:.x.... 73M6D14M5D27M 76/114 66.7% 114/94230402 0.0% 11/114 9.6% 105784903 84429652 +3243 chr4 + 190214555 182161788 182161787 182161876 89 TATATGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTAT chr4 + 94230402 92344692 92344691 92344771 92344692 92344691 92344771 80 TATTTGAATATCTATGCAAA---------ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ...x..x....x...:..x.---------.......:...x..x:......:.....:......:.x::.:xxx....:......:... 20M9D60M 59/80 73.8% 80/94230402 0.0% 9/80 11.2% 89817096 NA +3243 chr4 + 190214555 182161788 182161787 182161876 89 TATATGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTAT chr4 + 94230402 92341551 92341550 92341630 92341551 92341550 92341630 80 TATTTGAATATCTATGCAAA---------ATATATACACAAATCCATATGTATATATGTACACAGAGGCACTACTGTACATATGTATAT ...x..x....x...:..x.---------.......:...x..x:......:.....:......:.x::.:xxx....:......:... 20M9D60M 59/80 73.8% 80/94230402 0.0% 9/80 11.2% 89820237 NA +3176 chr4 + 190214555 182161792 182161791 182161846 55 TGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATAT chr4 + 94230402 55694454 55694453 55694508 55694454 55694453 55694508 55 TGTATGCATACATACACATGTGTGTATGTGTATTCTCATGTACGTGTGTATATAT .....::...:.:...:..:.:.....:.:...x.x...:..::........... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 126467338 63747217 +3203 chr4 + 190214555 182161806 182161805 182161887 82 CATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTATATATATACACA chr4 + 94230402 76376857 76376856 76376938 76376857 76376856 76376938 82 CATGCATACTTCTTTACATATGCAAAAATACATGTATGCATACAGAGTTACTTGTGTATACATATGTGCATATAAACAGATA ...::...:x.x.x..:...::..x.x...::.....::.....x.:x..:x.:...:..:.......:.....x.:.x.:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 105784949 84429606 +3230 chr4 + 190214555 182161823 182161822 182161897 75 ATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTATATATATACACACATATATGTG chr4 + 94230402 22600198 22600197 22600272 22600198 22600197 22600272 75 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGTG .:........x:.::..:.x.:.:.::..x.:.x.x..:.......x.....:.:.....:..::..::..x... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 159561625 30652930 +3551 chr4 + 190214555 182161852 182161851 182161974 123 AATATATATGTGTATATATGTGTATATATATACACACATATATGTGTATATATACACACACATGTATGTGTATATATATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATAT chr4 + 94230402 89812945 89812944 89813060 89812945 89812944 89813060 116 AGTTTATATGTTAGTGTTTGTG---GCATATAGATAAATATGTGTATATCTAAATGCCTTAATACATGTGCAAACT----CCCATGCGTATGTTCTTGTGTGTGTGTGTATATATGTCTAAAT .:.x.......xx:.:.x....---::.....x.:.x....:...:...x..x.::.x:xx..::.....:.x.:x----.x...:::...:..:x...................:.x..x.. 22M3D51M4D43M 78/116 67.2% 116/94230402 0.0% 7/116 6.0% 92348907 NA +3133 chr4 + 190214555 182161899 182161898 182161969 71 ATATATACACACACATGTATGTGTATATATATACACATATATATATTTGTGTGTGTGTGTGTATATATATA chr4 + 94230402 22600198 22600197 22600268 22600198 22600197 22600268 71 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTA .:.:.:.:.:x......:.x::::..::...:.x.x....:...............:.:..:..::.::.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 159561701 30652854 +3136 chr4 + 190214555 182161929 182161928 182162003 75 ATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGATGCAA chr4 + 94230402 46063299 46063298 46063373 46063299 46063298 46063373 75 ATACATGTGTACATGTGTATGAGCACATGTCCATGTATGTCTATATACATATATGGCAATATATACAAGGTGCAA .....::.:..:..:.x.:..x.::::...x:..:...:.x......:......:xxx.......:.x.:..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 136098630 54115925 +3209 chr4 + 190214555 182216972 182216971 182217061 90 TATAAGTATTTTTCTAAATTTCACCATCATTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTC chr4 + 94230402 29781650 29781649 29781732 29781650 29781649 29781732 83 TATTGGCGTTTCACATAATCTCACCATCGCTCTCTTTTATTGCTTTTTTCTTTTTTTTTTTTCTCT-------CAGATATTCTCCCTGCC ...x:.::...:x.xx...:........::.:.....:x..x:......:............:.:.-------....xx:..x.:...:. 66M7D17M 58/83 69.9% 83/94230402 0.0% 7/83 8.4% 152435322 37779233 +3107 chr4 + 190214555 182216981 182216980 182217039 59 TTTTCTAAATTTCACCATCATTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 36195270 36195269 36195328 36195270 36195269 36195328 59 TTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTT ....::.xx..:..x:.x.............x.....:.......::...x...x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 146021711 44192844 +3449 chr4 + 190214555 182219093 182219092 182219151 59 GCACCTGTAGTCTCAGCTACTCGGGAGGCTGAGGCAGGTGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......::........:.::........x.xx.....x.:........::.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 106185887 84028668 +3389 chr4 + 190214555 182229587 182229586 182229665 79 ACTGTGTGTGCGTGTGTATGTGTGTATATATATGTGTATATATATATATACACACACACACACATATATGTATATATAA chr4 + 94230402 79265516 79265515 79265590 79265516 79265515 79265590 75 ACAGTGTGTGTGTGTGCATGTGTG----TGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAA ..x.......:.....:.......----.:xx...:....:...:.::.:::.....:..x......x...:.x:.:.. 24M4D51M 54/75 72.0% 75/94230402 0.0% 4/75 5.3% 102964071 87250484 +3071 chr4 + 190214555 182241480 182241479 182241539 60 TATCTTCAGTCGCTTCCTTTTCCCTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTGTGA chr4 + 94230402 51591921 51591920 51591980 51591921 51591920 51591980 60 TATTTTCAGCCTCTCCACCTTCTCTTTCTGATTGTTTTTTTTTTTTTTTTTCCTTTCTGA ...:.....:.x..:.x::...:......xx..x:...:............::...x... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 130649559 59564996 +3561 chr4 + 190214555 182276663 182276662 182276717 55 CTATGTTATTTGCCTAGAGGAAATAATGTTTCAGTGAAAATTATCAGCTGAATTT chr4 + 94230402 37297124 37297123 37297178 37297124 37297123 37297178 55 CTATGTTATTTGTCAAGAGGAAAGAGTGTTTAGGTGAAGGTTATCAGCTTAACTT ............:.x........x.:.....x:.....::.........x..:.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 144979539 45235016 +3323 chr4 + 190214555 182281495 182281494 182281535 41 ACCAAGTTTTTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTT chr4 + 94230402 19090303 19090302 19090343 19090303 19090302 19090343 41 ACTAACTGTTTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTT ..:..x.x................................. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 163191192 27023363 +3667 chr4 + 190214555 182282764 182282763 182282853 90 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTCAGGAGAATTGCTTGAACCCAGGAGACAAAGGTTGTGGTGAGCCAAAATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..:.x....:.:...........::........:.xx.x...x::...........:..x:xx:..:...:.------..x..x...... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 106249558 83964997 +3096 chr4 + 190214555 182298962 182298961 182299015 54 GCAACAGAGCAAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 88382708 88382707 88382761 88382708 88382707 88382761 54 GCAAAGGAGCAAGACAGCCTCTCAAAAAGGAGAAAAAAAAAAAAAAGCATAGAA ....x:.........xx.:.........::.:..............:x.x.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 93916254 NA +9148 chr4 + 190214555 182346627 182346626 182346933 307 TTATCTTTTTTTCCCCCTAATTAGGACAGAATTTTACCCTAAGGCAGTTAGGAGTTTGTGAACCAGCAACTCGAAGAGGACTGGCATTTTGTGCGGAAATGGGGCTCCCTCACAGAGGTTACTCTATCAGTGCAGGGTCAGATGCTGATACTGAAAATGAAGCAGTGATGTCCCCAGAGCATGCCATGAGACTTTGGGGCAGGGGGGTCAAATCAGGCCGCAGCTCCTGCCTGTCAAGTCGGTCCAACTCAGCCCTCACCCTGACAGATACGGAGCACGAAAACAAGTCCGACAGTGAGAATGGTAA chr4 + 94230402 15443331 15443330 15443614 15443331 15443330 15443614 284 TTTTTTTTTTCTCCCCCAGAC----ATGGAATTCTG---TGAGACACCCCACATTCTGTGCTCTGGCTACC--AAACAGATTTACATGGTGTGTCGGAGCACAGCTACCCACTAGAGGT--------------GGGCTCAGATGTTGATACTGAAACCGAAGGTGGCGCATCACCAGATCATGCCCTGAGGATGTGGATGAGGGGGATGAAGTCAGAACACAGCTCCTGTCTGTCAAGCCGGGCAAACTCAGCGTTGTCCCTGACTGACACTGACCATGAGAGGAAGTCTGATGGGGAGAATGGTAA ..x.:.....:......x:.:----.::.....:.:---.:..:..x::x:x.x.:....xx.::..x..:--..:x:..:.x:...xx....:x.:.:::x:...x..:xx:......--------------:..x.......:...........x:....xx.xx:::..x.....x......x....:x.x...:xx......:.x..:....:x.:.........:........:...x.x........x:.xx.......x..:..x..x..:..:.:x.....:..::.x........... 21M4D11M3D32M2D46M14D174M 190/284 66.9% 284/94230402 0.0% 23/284 8.1% 166903296 23311259 +3260 chr4 + 190214555 182363364 182363363 182363438 75 TTGATATATGTGTGTATATATATGAATATGTA----TATGTATATATTCATATATGTACATATATACATATATATGCAT chr4 + 94230402 39937171 39937170 39937249 39937171 39937170 39937249 79 TTGCTATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCAT ...x.....:.:...:.:..::..::.:....----.x.::...:xx:....:.::..............x..:..... 32M4I43M 53/75 70.7% 79/94230402 0.0% 4/75 5.3% 142426193 47788362 +3211 chr4 + 190214555 182381493 182381492 182381572 80 AGGTAGGCAACTCCACAATGGGTTCTATAGCTGTTCTTTTCTTTTCCTCCCCTCCCCTCCCCTCTTCTCCCCTCCCCTCC chr4 + 94230402 37570557 37570556 37570635 37570557 37570556 37570635 79 AGATATTCAAATCGAGTCTGTGTGTTGTAATTACT-TCTTCTTTTCCTCCTCTCCCCCTCCCCCTTTTCCCCTGCCCCCC ..:..xx...x..x.xxx..x..x:.:..::.::.-.:............:......::...:...:......x...:.. 35M1D44M 55/79 69.6% 79/94230402 0.0% 1/79 1.3% 144810936 45403619 +3145 chr4 + 190214555 182397272 182397271 182397343 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAACTGGGAGGTGGAGGGTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x...x........x.::.:..x.xx:..x..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 106364066 83850489 +3367 chr4 + 190214555 182397396 182397395 182397466 71 TCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAACAAGAGGTAATGGGAGAGAGCAGAAAAAGGCA chr4 + 94230402 62290408 62290407 62290478 62290408 62290407 62290478 71 TCTAAAAAACAAACAAAAAAAAAACAACAAAAAAAACCACATCAGGAAATGGGAGGGCACAGGAAAACACA .........x...x..........x..x......xxxx...xx...x........:.x:...:....x:.. 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 120106988 70107567 +3437 chr4 + 190214555 182442753 182442752 182442847 95 GACTAATTTGTGTGTGTGTGT-GTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATAT chr4 + 94230402 70094115 70094114 70094210 70094115 70094114 70094210 96 GACCACTTTGTTAGTAGCTGTCAAGGGTGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATATGCACAT ...:.x.....xx..:xx...-:x.x.....x..........x...x...x.....:..:.::......x...xx.x:...x...:...:::.:.. 21M1I74M 66/95 69.5% 96/94230402 0.0% 1/95 1.1% 112348638 77865917 +3919 chr4 + 190214555 182442754 182442753 182442835 82 ACTAATTTGTGTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACAT chr4 + 94230402 85834534 85834533 85834615 85834534 85834533 85834615 82 ATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT .:.x........x...............::..xx:...:x.::.:::.:....x.....::.x...::...:...:.:.... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 96608220 93606335 +3785 chr4 + 190214555 182442758 182442757 182442847 90 ATTTGTGTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATAT chr4 + 94230402 85834534 85834533 85834615 85834534 85834533 85834615 82 ATTCATTTGTGTCTGTGTGTGTGT--------GTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...::.x.....x...........--------......:.xx:...:x::.....:..:..x......:.x...:..:.......:.:.. 24M8D58M 61/82 74.4% 82/94230402 0.0% 8/82 9.8% 96608224 93606331 +3074 chr4 + 190214555 182442761 182442760 182442832 72 TGTGTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATA chr4 + 94230402 85834543 85834542 85834614 85834543 85834542 85834614 72 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA ...x..................:xx....:x.::.:::.:...:x...:.:::x...::.:.....:.:.:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 96608218 93606337 +3265 chr4 + 190214555 182442763 182442762 182442836 74 TGTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .....x.............:::...xx:...:x.::.:::.:.:..x.:....:.x...:..:.:...:...:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 96608222 93606333 +3425 chr4 + 190214555 182442764 182442763 182442842 79 GTGTGTGTGTGTGTGTGTACATATGTGTG-TGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACA chr4 + 94230402 6083144 6083143 6083223 6083144 6083143 6083223 80 GTGTTGATATATGCTTCTCCCTATATATGGTGTGTGTGTGTGCGCATACACAAACATATATATATATATTCTTACATGTA ....xx:.:.:..:x.x.x.x...:.:..-............:::.......x.:.....:........x.x.....::. 29M1I50M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% 176359620 13854935 +3368 chr4 + 190214555 182442771 182442770 182442974 204 TGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACA-------CACACACACACACATATATATATATATGGGTTCTTTTCTGTAGAGATGTAGTTTCGC-CATGTT-------GCTCAGGCTGGTCTTGAACTCCTGGGCTCAAATGATCCATCATCT chr4 + 94230402 58675346 58675345 58675558 58675346 58675345 58675558 213 TGTCTGTTGGAAAAACTGTTTGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTAGCCTATACTTAAAATTGTAAAGACAGAAAGACATACTTTTC---AAAGATGCAACCTTGCACCTGTTTACTAGAGTCCTAGCTCACCTT---CTTCTGAGCTACAGTTATTCAGCATCT ...x...xx.x.x.xx...x...:.x..x::x..x..x.x:...:..x.x.::..::.....:.....:x.....:.:.........x..x.:.:.-------:.:..x:.x.xx::..x.x.:.x.x.x:x:.x......---.:.....:.:::.:..-.x....-------.::.x:...x::...---..:...:...xx.:.x..:..x..... 96M7I38M3D16M1I6M7I15M3D27M 123/198 62.1% 213/94230402 0.0% 21/198 10.6% 123767425 66447130 +3122 chr4 + 190214555 182442779 182442778 182442852 74 TGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACA chr4 + 94230402 39937175 39937174 39937248 39937175 39937174 39937248 74 TATATATATGTGTGTACGTGGGTGTGTACTGTTTTACATACTACCATACACATACATATATACATAGATGTGCA .:..:..........::...x.......:xxx:x:.:...:xxx....:.:.......:.......x..:::.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 142505604 47708951 +4080 chr4 + 190214555 182442779 182442778 182442860 82 TGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACA chr4 + 94230402 85834533 85834532 85834614 85834533 85834532 85834614 82 TATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:.x...x.....x.............:.:..:xx..:..x::.:.:....:..x......::x...::.....:....... 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 96608246 93606309 +3222 chr4 + 190214555 182442780 182442779 182442839 60 GTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACAT chr4 + 94230402 68837087 68837086 68837144 68837087 68837086 68837144 58 GTAAGAACGTGTGCGTGTGTGTGTG--TACACACAAATACATACATACACATGCACACAT ...x:x.:.....:...........--..:.....x...:.......:.:..:..:.... 25M2D33M 46/58 79.3% 58/94230402 0.0% 2/58 3.4% 113605693 76608862 +3328 chr4 + 190214555 182442785 182442784 182442854 70 TATGTGTGTGTGTGTGTGTGTAT--ATACACATATATATACATATATATACATACATACATATATACACACA chr4 + 94230402 85834543 85834542 85834614 85834543 85834542 85834614 72 TGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:.x...................--..::.x::...:...::..x...:.::.x:..:..:.:......... 23M2I47M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% 96608242 93606313 +3631 chr4 + 190214555 182442785 182442784 182442858 74 TATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACA chr4 + 94230402 85834541 85834540 85834614 85834541 85834540 85834614 74 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACA .:...x...............:...xx.::..x::........:..x.:.:.::.x:..::.:...:....... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 96608244 93606311 +3206 chr4 + 190214555 182442791 182442790 182442844 54 TGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATA chr4 + 94230402 70600711 70600710 70600764 70600711 70600710 70600764 54 TGTGTGCGTAGGTCCATGTACACCTATACATACATATATAGACATGCACACACA ......:..:x..x:..:.....x....:...........x....:..:...:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 111842080 78372475 +3105 chr4 + 190214555 182448613 182448612 182448728 116 CCGCCGGCGAAGCCCCGCCGAGGAACACGGCCGCTGCCCGGGGCGGCTCGCGAGCGTGCGTGTGTGGAGGGGAGGATGCCGCCCCGCGGGGTCTTCGGAGGGTGCCGGGAGCGGGT chr4 + 94230402 35763662 35763661 35763777 35763662 35763661 35763777 116 CCGGCAGCGGGACCCTGCCCGCGGGCAGCCTCAGTGCTGGTGGACGTCTGGGTGCGTGCGTATGTGGACGTGTGGATCCTGTCCAGCGCCAGCGATAGAGGATACTAGGAGCGAGT ...x.:...:::...:...x:x.::..xxx:.:x...:x.x..xx.:::.x.x........:......x.x.x....x.:.:..x...xx:x.xx::....:.:.::......:.. 116M 68/116 58.6% 116/94230402 0.0% 0/116 0.0% 146684951 43529604 +3134 chr4 + 190214555 182457055 182457054 182457127 73 TGCGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATCTCTTGCACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x....:.:.........:.:.........x.xx.x...x.x....x...::.:..x:xx:..:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 106423850 83790705 +3032 chr4 + 190214555 182457187 182457186 182457225 39 AAAAAAAAAAAAAAAAGAACAAAAACCCCACAATACTCT chr4 + 94230402 43466413 43466412 43466451 43466413 43466412 43466451 39 AAAAAAAAAAAAAAAAAAGCAAAAACCCCACAATAATTT ................:.:................x.:. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 138990774 51223781 +3261 chr4 + 190214555 182462751 182462750 182462829 79 GTGGTGGGCGCCTGTGATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCACTAGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--...::.:...........:.........x.xx.x...x....x.....::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 106429550 83785005 +3316 chr4 + 190214555 182473830 182473829 182473900 71 CACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCTGGAGGATAGCTTGAACTCAGGAGTTCAAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x......:.........:x::........x.:x.x.:.xx:.......:...:..:.:x:..:..:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 106440623 83773932 +3557 chr4 + 190214555 182481664 182481663 182481755 92 GTGCACCTGTAGTCCCAGCTACTGGGAAGGCTGAGGCAGGAGAATTGTTTGAGCCCAGGAGGCAAGGGTTTCAGTGAGCCGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.........x.:.........x.xx.x...x:::....:.....:..x:xx...:.x:..------:.x...:..... 74M6D12M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 106448460 83766095 +3586 chr4 + 190214555 182509801 182509800 182509866 66 GTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAAAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:...:.--....:.:...........::........x.xx:x...x.............:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 106476600 83737955 +3284 chr4 + 190214555 182523143 182523142 182523201 59 TGGCGGGTTTTGTTTTTTGTTTTTGTGTGTGTGTGTGTGGTTTTGTTGTTGTTGTTGTT chr4 + 94230402 48767257 48767256 48767315 48767257 48767256 48767315 59 TGTTGGTTTTTGTATTTTTTTTTTTCGCGTGTGTGTGTGTGTTTGGTTTTGTTGTTGTT ..x:..x......x....x.....x:.:...........xx....x.x........... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 133755886 56458669 +3466 chr4 + 190214555 182523149 182523148 182523204 56 GTTTTGTTTTTTGTTTTTGTGTGTGTGTGTGTGGTTTTGTTGTTGTTGTTGTTGTT chr4 + 94230402 27225264 27225263 27225319 27225264 27225263 27225319 56 GCTTCCTACTTTTTTTTTGTGTGTATGTGTGTTGTTTTTTTTTTGTTGTTGTTGTT .:..:x.x:...x...........:.......x.....x..x.............. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 155297885 34916670 +3171 chr4 + 190214555 182527693 182527692 182527751 59 TTAAGTCAAAGTTTGTTTTTTTTGGTTGTTGTTGTTTTTGTTTTTTTTGTTTTTGAGAT chr4 + 94230402 6618766 6618765 6618824 6618766 6618765 6618824 59 TTGAAGCAAACTGGGTTTTTTTTGATTGCTGTTGGTTTTGTTTGTTTTTTTTTAGAAAT ..:.:x....x.xx..........:...:.....x........x....x....x..:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 175908927 14305628 +3714 chr4 + 190214555 182541919 182541918 182542005 87 GAGGCGTAGTGGCGCACACCTGTAGTCCCAGCTACTTGGAAGGCCAAGGTGGGAGGATCGCTTGAGCCCAGGAGTTTGAGGCCTCAG chr4 + 94230402 76033193 76033192 76033277 76033193 76033192 76033277 85 GATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:.::.....:....:--......:...........:.....::..x:xx.x.:.x.:.....:.....:..:..x:...:x:.. 18M2D67M 59/85 69.4% 85/94230402 0.0% 2/85 2.4% 106508726 83705829 +3070 chr4 + 190214555 182564557 182564556 182564596 40 TTTTTTTGTTTTTGTTTTTGTTTTGTTTTTTTTTTTTTTG chr4 + 94230402 90203143 90203142 90203182 90203143 90203142 90203182 40 TTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTG ..........x.....x......x................ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 92361414 NA +3415 chr4 + 190214555 182581758 182581757 182581876 119 AAAAGAATATTAGGAAAAATATCTTAATGCAAAATATATTAATTAGTAATCTGCCAACACTGAGATGTACTATAA------GGCCAAGAAGAAAAGGAATGATATCTAGAGTCTTGTCATTTTTT chr4 + 94230402 37819633 37819632 37819748 37819633 37819632 37819748 116 AAAAGAATGTGAAGAAAAATGCCTTAAAGCAAAATATATTGATTCACAG---AACAATAATAAAATGTATGACAATATAGCAACTGAGGAGAAAAAAAAAA------AAAGCTTTTTTTTTTTTT ........:.x.:.......::.....x............:...x::.:---:x...:.x.:.:.....:x.:..------::.::..:......::..x:------.:..::..x.:x...... 49M3D23M6I20M6D18M 75/110 68.2% 116/94230402 0.0% 15/110 13.6% 144762125 45452430 +3129 chr4 + 190214555 182589843 182589842 182589903 61 GTGCGCCTGTAATCACAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGTACCCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:x..........::........x.xx.x...x.:....x....:.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 106556639 83657916 +3259 chr4 + 190214555 182597269 182597268 182597351 83 CGTGGTGGCACATGCCTGTAGTTTCAGCTACTTGAGAGGCTGAGGCAGGAGGATCACTTGAGCATGGGAGGTAGACGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--.......:...........:........x.xx.x.:.x.......:.x::.:..x.xx:x....:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 106564072 83650483 +3066 chr4 + 190214555 182606388 182606387 182606466 79 GTGGTGGGCACCTGTAATCTCAGCTACTTGGCAGGCTGAGGTGAGAGAATCTCTTGAACCCGGGAGGCAGTGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.::..........:x........x:xx.x...x.x.........:.:..x:xxx..:..:.. 6M2D71M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 106573187 83641368 +3925 chr4 + 190214555 182615675 182615674 182615748 74 AACTAATAGGTGAAGTTGAAAGGGAAGAGTTAAAAAAAGGGGGATGTTGAAAAGTGAAAAAAAAAAAAGAGTGA chr4 + 94230402 49044710 49044709 49044779 49044710 49044709 49044779 70 AAGCACTAAGTGA----GAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGA ..x:.x..:....----.................:....::.:.x.x......:.....:....:.....:... 13M4D57M 56/70 80.0% 70/94230402 0.0% 4/70 5.7% 133570965 56643590 +3255 chr4 + 190214555 182619291 182619290 182619360 70 CATGGTGGCACATACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATCGCTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::..--.x......:...........::........x.xx.x:..x.:........::.:.. 12M2D56M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 106586094 83628461 +8496 chr4 + 190214555 182628588 182628587 182628894 307 TGTCTCTTGTCTCTTGTATCGTAACATATTTGTATCTTATAATGATATTCTCC-----TTTTCCACAGGCATTTCCTATTCAAAACAGGAACAGGTACAACGCCACTGTTCAGTACTGCAACCCCAGGATACACAATGGCATCTGGCTCTGTTTATTCACCACCTACTCGGCCACTACCTAGAAACACCCTATCAAGAAGTGCTTTTAAATTCAAGAAGTCTTCAAAGTACTGTAGCTGGAAATGCACTGCACTGTGTGCCGTAGGGGTCTCGGTGCTCCTGGCAATACTCCTGTCTTATTTTATAGGTAAG chr4 + 94230402 15510673 15510672 15510979 15510673 15510672 15510979 307 TGCCTTTTG-CTCTTACAGC---ACAAATTGGT-TTTTACAATTTGATTCTTTGTCTTCTTTTTGTAGGCATTTCCTATTTAAACATGGATCGGGGTCTTCAGCAATCTTCAGTGCAGCCAGTCAGAACTATCCTTTAACATCCAATACTGTTTACTCTCCACCTCCTAGGCCTCTTCCTAGAAATACCTTTTCTAGACCTGCCTTCACTTTTAGCAAACCTTACAGGTGTTGCAACTGGAAGTGCACTGCTCTGAGTGCTACTGCCATTACGGTTACGCTGGCGTTGTTGCTGGCCTATGTTATCGGTAAG ..:..:...-.....::.x.---...x...x..-.:...:...xxx.....::-----:...::::..............:...xxx...x.:..xx.xx.:x..x.x......:.x..x.x:.x:::x..:x.xx.::....::::x.......:..x......x..x....x..x........:...:.x..x...xx...:..:.xx..:.:x..::...xx.:..::..:.:......:........x...x....:::x.xx:.:x....xx:x.....:x.::.x...x.:...x....x...... 9M1D10M3D10M1D19M5I254M 195/302 64.6% 307/94230402 0.0% 10/302 3.3% 167117915 23096640 +3866 chr4 + 190214555 182636577 182636576 182636659 83 CATGGTGGCACGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x......:.........:.::........x.xx.x...x.............:..x:xx:..:..:.. 9M2D72M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 106603380 83611175 +3557 chr4 + 190214555 182639959 182639958 182640019 61 GCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:....x......:.........:.::........x.xx.x...x::...........:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 106606755 83607800 +3363 chr4 + 190214555 182651566 182651565 182651639 74 GTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCACGAAAATTGCTTGAACCCGGGAGACAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.........:.::.......:x.x:.x:..x::.........:.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 106618362 83596193 +3542 chr4 + 190214555 182661082 182661081 182661253 172 CTCTTTTTGTATGGATACGAGTTGAAAAACTACAAATATGTGTGTATGTGTATATATGCATATGATTTATGCTGCTTAAACAAAACAATTCCAATTGCTTTTAAATTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGATGGAGT chr4 + 94230402 91163871 91163870 91163995 91163871 91163870 91163995 125 CTCTTTCTG--------CCAGTAGGAAGACTAAAAATACATATGTA---------------ATGATGT-TCCTG--------GAACATTTGCAAATGCCTTTAAATGATTATTCCTTTTTTTTTTTTTTTTCTTTTT---------------CCTGCTATCCAGAATAGTGT ......:..--------.x...x.:..:....x.....::.:....---------------.....x.-.x...--------:....x..x...x...:.......xx.x...::................:.....---------------:...::.:....:..:.x.. 9M8D29M15D7M1D5M8D55M15D20M 96/125 76.8% 125/94230402 0.0% 47/125 37.6% 91497211 NA +3240 chr4 + 190214555 182665755 182665754 182665856 102 ACATGGTGGCGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGCGCCA chr4 + 94230402 76033196 76033195 76033289 76033196 76033195 76033289 94 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...::....:.--...x......:.........::::........x.xx.x...xx:.x.......:.:..x:xx:..:..:..------..x...::.... 11M2D71M6D12M 65/94 69.1% 94/94230402 0.0% 8/94 8.5% 106632559 83581996 +5068 chr4 + 190214555 182680271 182680270 182680352 82 AATTGCCATGGAAATGGAGAATGCGTTTCTGGAACTTGCCATTGTTTTCCAGGATTTCTGGGTCCGGATTGTTCAAGAGGTA chr4 + 94230402 15533124 15533123 15533205 15533124 15533123 15533205 82 AATTGCAATGGGAATGGAGAATGTATCTCGGGGCACTGCCACTGTTTCCCAGGATTCCTTGGTCCTGATTGTGCAAAAGGTA ......x....:...........::.:..x..:xx:.....:.....:........:..x.....x......x...:..... 82M 65/82 79.3% 82/94230402 0.0% 0/82 0.0% 167147147 23067408 +7324 chr4 + 190214555 182680535 182680534 182680739 205 TTTCACAGCCGCCTGTCCAGTGTTATGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTGTTTCAGCGGCTGGAAGGGCACCGAGTGTGATGTGCCGACTACCCAGTGTATTGACCCACAGTGTGGGGGTCGTGGGATTTGTATCATGGGCTCTTGTGCTTGCAACTCAGGATACAAAGGAGAAAGTTGTGAAGAAGGT chr4 + 94230402 15534207 15534206 15534411 15534207 15534206 15534411 205 TTCCTCAGATTCCTGCCCGGTGCTCTGTAGTGGAAATGGAGAATATGAGAAAGGTCACTGTGTGTGTCGAAATGGGTGGAAAGGACCAGAGTGTGATGTTCCTGAAGAACAGTGTATCGACCCAACCTGCTTTGGCCACGGCGCCTGTATCATGGGAGTCTGCATCTGTGTTCCTGGATACAAAGGAGAGATCTGTGAGGAAGGT ..:.x...x:x....:..:...:.x........x..:..:x.:..:xxx..:..:.:...:x.....:xx.::..x.....:..xx.x...........x..x:xx:xx........:......xxx..:xxx..:.::..x:::...........xx::..::::..::x::.x..............:.x:.....:...... 205M 131/205 63.9% 205/94230402 0.0% 0/205 0.0% 167146328 23068227 +4334 chr4 + 190214555 182690642 182690641 182690832 191 GTGTGCCAAAAAGTTATCCATAGGCGGATTTAACTTACC-AACCAATAGTTATTCAACAAATCATTTTAGTGTTGTTCTCAGTGGCCTTGGTATTATTACATGGATAATAGTTTCCCATAGATGAGCTGTTCTTGAACAAATT--TCTAGTTGTTTAG--GAACAAACAGGATTTTTATTAGCAGTGGGTCTTTGT chr4 + 94230402 88459185 88459184 88459375 88459185 88459184 88459375 191 GTGTAACTGAAAGCTGCCCCTAGGCACCAATAATTTGTCTGACCTGCGTTTAGACAACGAATCTGCTCAGC-----TCTAACCAGCCTTGGCAGCCTTGCACAGGTCATATTTTTACATGGATGAACTGTTCCTCAACAATTTCCCCTAGTGTGCTAGCAGCACAAACAGGCTTTTCTTTGCGAGCAGGTACGTGT ....:x.x:....:.::..x.....:xxxx...:..::.-:...x:::x...xx....:....xx:.:..:-----...x.x::.......:.x:x..:..::.:.x...x...:x...:.....:......:.x.....x..--:.....xxx:...--.x.........x....:x..:xx..::...x:x... 39M1I31M5D67M2I13M2I36M 118/186 63.4% 191/94230402 0.0% 10/186 5.4% 94231457 NA +3711 chr4 + 190214555 182696589 182696588 182696667 79 GTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........--....:.:...........::........x.xx.x...x.:........x:.:..::xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 106663388 83551167 +5964 chr4 + 190214555 182730852 182730851 182731213 362 ACTAAGCATACCTTGTTCTTTCTTAGGTTTGACTTGGTGGCAAATGGTGGGGCCTCTCTAACTTTGGTATTTGAACGATCCCCATTCCTCACTCAGTATCATACTGTGTGGATTCCATGGAATGTCTTTTATGTGATGGATACCCTAGTCATGAAGAAAGAAGAGAATGACATTCCCAGCTGTGATCTGAGTGGATTCGTGAGGCCAAATCCCATCATTGTGTCATCACCTTTATCCACCTTTTTCAGATCTTCTCCTGAAGACAGTCCCATCATTCCCGAAACACAGGTAAAATATTCTCACAGGCAGTACTTGTAAATACAAGATCTTCAGATCATGTTT--------------TGCCAGAGAATCTTAAAAAT chr4 + 94230402 15577411 15577410 15577775 15577411 15577410 15577775 365 ACAAAGAATTTTGTTTTCTTTTCCAGTTTTGACCTTGTGGCTGTGGGAGGCATCTCCGTCACCCTGGTTTTTGACAGATCTCCTTTCATATCTGAAAAAAGGACACTTTGGTTGTCTTGGAATAGATTTGTCATTGTCGACAAAGTTGTAATGCAAAGAGCGGAGTCAGATATACCATCTTGTGATGTCAGTAGTTTCATCAGTCCAAATCCTATTGTACTCCCTTCTCCCCTGACAGCATTTGGAGGCTCCTGTCCAGAAAGAGGAACTGTTATTCCAGAACTACAGGTAA-----------TGAAAATACTTTTAAATTAACATTTTTTTAACTGTGTTTAGTTGCTGAACAAGTTCTAGACGATGTTAAAAAT ..x...x..x::x.x......:::..x......:.x.....x:xx..x..x::...:x.x..::....x.....xx....:..x...x.xx..x.:x.xx:x..xx.x...x.x:.x......:xx...xx::.x:.x..:.xxx.x..x...x.:.:..x:...xxx..:..x..xxx:......x.x...:.x...:.x..x........:..::.xx.x:.x..x..::.:x.x:.x...xxx:.x..:.x...x...::x:.xx.::.:.....x...x:........-----------x.:x.:.....x.....xx.x:x.:..:x:.:::.....--------------.x.:...x:..x........ 292M11D39M14I20M 208/351 59.3% 365/94230402 0.0% 25/351 7.1% 167153441 23061114 +3857 chr4 + 190214555 182731368 182731367 182731450 83 CATGGTGATGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::...:..--...x......:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 106698171 83516384 +7811 chr4 + 190214555 182738384 182738383 182738549 166 ATTTGTTTGGATTCCAGTGTCAGTTGGATATGAGTATGAGTCGTGTTTGGACCTGACTCTGTGGGAAAAGAGGACTGCCATTCTGCAGGGCTATGAATTGGATGCGTCCAACATGGGTGGCTGGACATTAGATAAACATCACGTGCTGGATGTACAGAACGGTAAG chr4 + 94230402 15586336 15586335 15586496 15586336 15586335 15586496 161 ATTTGTTTG-----CAGTGTCAGTGGGATATGAATATGAGACATGTCCTGATTTTATTCTGTGGGAGAAAAGAACAGTAATCCTTCAAGGCTTTGAAATGGATGCTTCAAATCTGGGAGGCTGGTCTATAAACAAACACCATGTATTAAATCCACAAAGTGGTAAG .........-----..........x........:......x.:...::x..::.x.:.........:..:..:..x.:x..:..x..:....x....x.......x..x..:x....x......x.xx..:.:.....:..:..::.::..x:...:.::...... 9M5D152M 118/161 73.3% 161/94230402 0.0% 5/161 3.1% 167152048 23062507 +10063 chr4 + 190214555 182743166 182743165 182743422 257 CTAGGTATACTGTACAAGGGAAACGGGGAAAACCAGTTCATCTCCCAGCAGCCTCCAGTCGTGAGTAGCATCATGGGCAATGGGCGAAGGCGCAGCATTTCCTGCCCCAGTTGCAATGGTCAAGCTGATGGTAACAAGTTACTGGCCCCAGTGGCGCTAGCTTGTGGGATCGATGGCAGTCTGTACGTAGGCGATTTCAACTATGTGCGGCGGATATTCCCTTCTGGAAATGTAACAAGTGTCTTAGAACTAAGGTA chr4 + 94230402 15590994 15590993 15591250 15590994 15590993 15591250 257 CTAGGAATTGTACACAAAGGAAATGGTGAAAACATGTTCATTTCCCAGCAGCCACCGGTCATCTCCACTGTGATGGGCAATGGACACCAGAGGAGTGTCTCCTGCTCCAACTGCAACGGTCTTGCGCTCAACAGCAAACTCTTTGCCCCAGTTGCTCTGACTTCTGGGCCTGATGGGAGTGTGTATATTGGAGACTTCAATTTTGTCAGACGGATCTTTCCCTCTGGAAACTCTATTGGCATATTAGAGTTGAGGTA .....x..xx.::....:.....:..x......xx......:...........x..:...:.xxx:.x::.x...........:.:xx:.x.x..::.:......:...::.....:....xx..xxx::::.:...::.x:.x........x..x..::...x....x::.....x...x....::.x..x..:.....:.x...xx.:.....x..:..:........:x:x.:x:.::.x.....::.:..... 257M 170/257 66.1% 257/94230402 0.0% 0/257 0.0% 167152172 23062383 +16770 chr4 + 190214555 182754365 182754364 182754742 378 CCATTTCTTTTTTTATTAAGGTACGTCTGGAATGGCCCACTGACCTAGCCATTAACCCTATGGATAACTCCATTTATGTCCTGGATAATAATGTAGTTTTACAGATCACTGAAAATCGTCAAGTTCGCATTGCTGCTGGACGGCCCATGCACTGTCAGGTTCCCGGAGTGGAATATCCTGTGG---GGAAGCACGCGGTGCAGACAACACTGGAATCAGCCACTGCCATTGCTGTGTCCTACAGTGGGGTCCTGTACATTACTGAAACTGATGAGAAGAAAATTAACCGGATAAGGCAGGTCACAACAGATGGAGAAATCTCCTTAGTGGCCGGAATACCTTCAGAGTGTGACTGCAAAAATGATGCCAACTGTGACTGTT chr4 + 94230402 15622515 15622514 15622895 15622515 15622514 15622895 381 CCCTTGGTTTTGTTTCACAGGTGCGGTTAGAGTGGCCAACAGACCTGACAGTGAACCCACTGGACAACTCTCTGTACGTCCTGGACAACAACATTGTACTGCAGATCTCTGAGAGCAGACGTGTGCGCATCATCGCAGGACGCCCCATTCACTGCCAGGTGCCCGGCATTGACCACTTCATCGTCAGCAAGGTGGCCATCCATTCCACCCTGGAGTCAGCCCGAGCCATTGCTGTGTCCCACAGTGGGATACTCTACATTGCTGAGACTGATGAAAGAAAGATCAACCGGATACAACAGGTCACAACCAACGGCGAAATCTCCATAATCGCCGGAGCCCCGTCAGATTGTGACTGCAAGATTGATCCTAATTGTGACTGTT ..x..xx....x..x:xx....:..x:.:..:.....x..x.....::.x:.x.....xx....:.....:x.x..:........:..:..::.x..x:.:......x....:.::x.x.:x..x.....::::..x.....x.....x.....:.....x.....x:.x..x:.:::::.x.---.x...xxx..x:.x..xx.x..x.....:......xxx...............:........:.x..x......:....:........:.::..:..:.........x::...........x:.:..x.........x..:.x......::x..x.....x...........:.x....x.:..:.......... 183M3I195M 268/378 70.9% 381/94230402 0.0% 3/378 0.8% 167131850 23082705 +16569 chr4 + 190214555 182754744 182754743 182755271 528 CCAGAGTGGAGATGGCTACGCCAAGGATGCCAAACTCAGTGCCCCATCCTCCCTGGCTGCTTCTCCAGATGGTACACTGTATATTGCAGATCTAGGGAATATCCGGATCCGGGCTGTGTCAAAGAATAAGCCTTTACTTAACTCTATGAACTTCTATGAAGTTGCGTCTCCAACTGATCAAGAACTCTACATCTTTGACATCAATGGTACTCACCAATATACTGTAAGTTTAGTCACTGGTGATTACCTTTACAATTTTAGCTACAGCAATGACAATGATATTACTGCTGTGACAGACAGCAATGGCAACACCCTTAGAATTAGACGGGACCCAAATCGCATGCCAGTTCGAGTGGTGTCTCCTGATAACCAAGTGATATGGTTGACAATAGGAACAAATGGATGTTTGAAAAGCATGACTGCTCAAGGACTGGAATTAGTTTTGTTTACTTACCATGGCAATAGTGGCCTTTTAGCCACTAAAAGTGATGAAACTGGATGGACAACGTTTTTTGAGTAAGTATATGA chr4 + 94230402 15624542 15624541 15625069 15624542 15624541 15625069 528 CCCAGGTGATGGTGGATATGCCAAAGATGCAAAGCTGAAAGCACCTTCTTCCTTAGCAGTCTCTCCCGATGACACACTGTATGTAGCAGACCTTGGCAACATTCGCATCCGCGCCGTCAGCCGAAACAAGGCTCACCTCAGCGACACAAATATGTACGAGATTGCGTCACCGGCAGACCAAGAACTGTATCAGTTCACCATCAACGGCACCCACCTGCACACCCTGAACCTCATCACGAGAGACTATATTTACAACTTCACCTACAGCGGGGAAGGGGATGTTGCCACGATTACCAGCAGCAATGGGAATTCAGTGCACATCCGCAGAGATACGAGCGGCTTGCCCCTGTGGGTCGTGGTGCCGGGTGGCCAGGTATACTGGCTGACAATAAGCAGCAATGGCGTTCTGAAAAGGGTTTATGCCCAAGGCTACAACCTGGCTCTGATGACATATCCTGGAAACACAGGACTTCTAGCAACCAAAAGTGATGAAAATGGATGGACAACTGTGTATGAGTAAGTCCATGA ..x::...:x.:...x..:.....:.....x..:..x.:x..x..x..:...:.:..x.::.....x....::.........:.x.....:..x..x..:..:..x.....x..:..xxxxx::..:...x..:xx..:.:.xx:.::..:x.x..:..::.......x..::.x..:........x..:xxx..::x......:..:..:....x::.:..:x.:.:::.x:....x:.x..:..:x.......:..:.x.......::x..x::x...:..:.::.x:.x..x::.........x..:x.xx.xx:x..:x.xx.:..:x.:.::x..x....xx.x:.:..x...x:x..x.:.::...:..:xxx...:........:.x.xx.....xxx.:.......x:.xxx...:.....x:xx:.x:.:.:.:..x.x..x..:.x...x..:.xx..x...:....x..:.............x............xx.x.x.........x:.... 528M 330/528 62.5% 528/94230402 0.0% 0/528 0.0% 167130202 23084353 +3821 chr4 + 190214555 182777461 182777460 182777574 114 AAATGGAGATAATAGAG------ATATCATTCTCTCTGT-----CTATACATAAT-GTGTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250936 33250935 33251061 33250936 33250935 33251061 126 AGGTGGGGATAACAGAGTATTCCACACCAAATGTTCTGTTATTACTTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .::...:.....:....------.:.:..xx:x:.....-----..x....:.:.-.x....x.x.x.............:.:.:.....:.:...xxxx.....x...x.....x..x....... 17M6I16M5I11M1I70M 83/114 72.8% 126/94230402 0.0% 12/114 10.5% 149526525 40688030 +3429 chr4 + 190214555 182777493 182777492 182777572 80 TCTATACA-TAATGTGTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250981 33250980 33251061 33250981 33250980 33251061 81 TTTACACAGTAGGGTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT .:..:...-..:x..x...x.x.............:.:.:.....:.:.:..xxx:....x...x.....x..x....... 8M1I72M 59/80 73.8% 81/94230402 0.0% 1/80 1.2% 149526512 40688043 +3367 chr4 + 190214555 182777508 182777507 182777570 63 TTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 33250999 33250998 33251061 33250999 33250998 33251061 63 TTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ...x.............:.:.:.....:.:.:.:x.x..:..x...x.....x..x....... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 149526509 40688046 +3047 chr4 + 190214555 182777510 182777509 182777564 55 TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCTTTTTTTTTTTTTTTTT chr4 + 94230402 3818510 3818509 3818564 3818510 3818509 3818564 55 TGTGTGTGTGTGGGTGGGTTTGGGTTTGTGGGTGTTTCTTTTTTTTCCCCCTTTT .:..........x...x..x..x..x....x..:............:::::.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 178959000 11255555 +3055 chr4 + 190214555 182787724 182787723 182787776 53 AAACTCCACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGTGATTTCTCT chr4 + 94230402 33767111 33767110 33767163 33767111 33767110 33767163 53 AGACCCCCCCCCAAAAAAAAAAAACAAAAAAAAAACCAAGAAATGAACTCTCT .:..:..x..:.............x..........xx....x:...x:..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 149020613 41193942 +3049 chr4 + 190214555 182787743 182787742 182787790 48 AAAAAAAAAAAAAAAAAAAAGATGTGATTTCTCTCCAGGGCTCTGCCT chr4 + 94230402 37210360 37210359 37210407 37210360 37210359 37210407 48 AAAAAAAAAAAAGAAAAAAAAATGTGTTTTATTTACAGGGCACAGCCT ............:.......:.....x...x.:.x......x.x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 145577383 44637172 +9598 chr4 + 190214555 182789091 182789090 182789392 302 AGGTTAATGGCAGAAACCTCCTTTCAGTTGACTTTGATCGAACAACAAAGACAGAAAAGATCTATGACGACCACCGTAAATTTCTACTGAGGATCGCCTACGACACGTCTGGGCACCCGACTCTCTGGCTGCCAAGCAGCAAGCTGATGGCCGTCAATGTCACCTATTCATCCACAGGTCAAATTGCCAGCATCCAGCGAGGCACCACTAGCGAGAAAGTAGATTATGACGGACAGGGGAGGATCGTGTCTCGGGTCTTTGCTGATGGTAAAACATGGAGTTACACATATTTAGAAAAGGTA chr4 + 94230402 15637954 15637953 15638255 15637954 15637953 15638255 302 AGGCCCACAATAGAAATCTGCTCTCCATTGATTTCGATCATGTAACCAGAACTGGAAAGATCTACGATGATCATCGGAAATTCACTCTTCGGATTATGTATGACCAGACAGGGCGGCCAGTTCTGTGGTCACCCATCAGCAAATACAATGAGGTCAACATCACTTATTCCCACTCTGGATTAGTGACCTATATCCAAAGAGGAACTTGGACTGAGAAAATGGAGTATGATCCAAGCGGAAACATCATTTCCAGAACATGGGCAGATGGCAAAATATGGAGTTACACATACTTAGAGAAGGTA ...::x.::::.....:..x..:..x:....:..:....:x::...x.::..x.:.........:..:..:..:..x.....:x:x..xx....:::x..:...xx.x.x....:x..:::...x...:::..x.x......::xx.xx.xx.....::....:.....x:x.x.x..x:x.:.x:..x::.....:x....x..:xxx.x:......:.:..x.....:xx.x:x..:.:x...:.x..:x.:::x.xx..x.....:....:...............:.....:...... 302M 187/302 61.9% 302/94230402 0.0% 0/302 0.0% 167151137 23063418 +14918 chr4 + 190214555 182792263 182792262 182792663 401 TCTCTTTACAGTCCATGGTTCTTCTGCTTCATAGCCAGCGGCAGTACATCTTCGAATACGATATGTGGGACCGCCTGTCTGCCATCACCATGCCCAGTGTGGCTCGCCACACCATGCAGACCATCCGATCCATTGGCTACTACCGCAACATATACAACCCCCCGGAAAGCAACGCCTCCATCATCACGGACTACAACGAGGAAGGGCTGCTTCTACAAACAGCTTTCTTGGGTACAAGTCGGAGGGTCTTATTCAAATACAGAAGGCAGACTAGGCTCTCAGAAATTTTATATGATAGCACAAGAGTCAGTTTTACCTATGATGAAACAGCAGGAGTCCTAAAGACAGTAAACCTCCAGAGTGATGGTTTTATTTGCACCATTAGATACAGGCAAATTGGT chr4 + 94230402 15641405 15641404 15641805 15641405 15641404 15641805 401 TCTGATTGCAGTCTGTGATGCTCCTGTTGCACAGCCAGCGCCGCTACATCTTTGAGTATGACCAGTCAGACTACCTGCTGTCAGTCACCATGCCTAGCATGGTGCGCCATGCCTTGCAGACCATGCTCTCTGTTGGGTACTATCGCAACATCTACACCCCGCCAGACAGTGGTGCGGCTTTCATACAGGACGTCACCCGGGATGGACGGCTTCTGCAAACGTTGTATCCTGGGACAGGACGCAGAGTCCTCTATAAGTACTCCAAACAGTCTCGACTTTCTGAGATTCTTTATGACACTACTCAAGTCACATTTACTTACGAGGAATCTTCTGGCGTTATTAAAACCATACACTTAATGCATGATGGTTTCATCTGCACCATCAGATACAGGCAAACAGGT ...xx..:.....::..:.x..:...:.x..:........x.:x........:..:..:..:xx..x:...::....::xx.x:..........:..::...:x.....::..x..........x.xx..::....x.....:........x....x...x..:..x..::::..xx.:x....xxx....xx..x.x:...x..:.x......:.....:x:x.x:::x..x...:.x..x..:...:.x.x:..:...xxx.::...x..x.:..:..x..:...:.x.....:.x:..xx:.....xx.....:..:..x...x.xx.x..x..:x.x..:..x:..x..:.xxx.x:.........:..:........:.............:x... 401M 265/401 66.1% 401/94230402 0.0% 0/401 0.0% 167150858 23063697 +48135 chr4 + 190214555 182792661 182792660 182793889 1229 GGTCCCCTGATTGACAGGCAGATTTTCCGCTTTAGTGAAGATGGGATGGTAAATGCAAGATTTGACTATAGCTATGACAACAGCTTTCGAGTGACCAGCATGCAGGGTGTGATCAATGAAACGCCACTGCCTATTGATCTGTATCAGTTTGATGACATTTCTGGCAAAGTTGAGCAGTTTGGAAAGTTTGGAGTTATATATTATGATATTAACCAGATCATTTCTACAGCTGTAATGACCTATACGAAGCACTTTGATGCTCATGGCCGTATCAAGGAGATTCAATATGAGATATTCAGGTCGCTCATGTACTGGATTACAATTCAGTATGATAACATGGGTCGGGTAACCAAGAGAGAGATTAAAATAGGGCCCTTTGCCAACACCACCAAATATGCTTATGAATATGATGTTGATGGACAGCTCCAAACAGTTTACCTCAATGAAAAGATAATGTGGCGGTACAACTACGATCTGAATGGAAACCTCCATTTACTGAACCCAAGTAACAGTGCGCGTCTGACACCCCTTCGCTATGACCTGCGAGACAGAATCACTCGACTGGGTGATGTTCAATATCGGTTGGATGAAGATGGTTTCCTACGTCAAAGGGGCACGGAAATCTTTGAATATAGCTCCAAGGGGCTTCTAACTCGAGTTTACAGTAAAGGCAGTGGCTGGACAGTGATCTACCGTTATGACGGCCTGGGAAGGCGTGTTTCTAGCAAAACCAGTCTAGGACAGCACCTGCAGTTTTTTTATGCTGACTTAACTTATCCCACTAGGATTACTCATGTCTACAACCATTCGAGTTCAGAAATTACCTCCCTGTATTATGATCTCCAAGGACATCTTTTTGCCATGGAAATCAGCAGTGGGGATGAATTCTATATTGCATCGGATAACACAGGGACACCACTGGCTGTGTTCAGTAGCAATGGGCTTATGCTGAAACAGATTCAGTACACTGCATATGGGGAAATCTATTTTGACTCTAATATTGACTTTCAACTGGTAATTGGATTTCATGGTGGCCTGTATGACCCACTCACCAAATTAATCCACTTTGGAGAAAGAGATTATGACATTTTGGCAGGACGGTGGACAACACCTGACATAGAAATCTGGAAAAGAATTGGGAAGGACCCAGCTCCTTTTAACTTGTACATGTTTAGGAATAACAACCCTGCAAGCAAAATCCATGACGTGAAAGATTACATCACAGGTAA chr4 + 94230402 15642479 15642478 15643704 15642479 15642478 15643704 1226 GGTCCACTTATTGGCCGCCAGATCTTCAGATTTAGTGAAGAAGGGCTCGTAAATGCCAGGTTTGACTACAGCTATAACAAT---TTCCGTGTCACGAGTATGCAGGCCATGATAAACGAGACGCCTCTGCCCATTGATCTGTACCGTTACGTTGATGTCTCTGGCAGGACTGAACAATTTGGGAAGTTCAGTGTAATTAATTATGATTTAAATCAAGTTATAACCACCACTGTGATGAAACATACCAAAATTTTTAGTGCCAATGGCCAGGTGATTGAAGTACAGTACGAAATTCTCAAGTCTATTGCCTACTGGATGACCATCCAGTATGATAATATGGGCCGTATGGTGATCTGTGATATACGCGTCGGTGTAGATGCCAATATCACACGGTATTTTTATGAGTATGATGCTGATGGTCAGCTTCAGACTGTGTCTGTGAATGATAAAACCCAGTGGCGCTACAGCTACGACCTTAATGGCAACATCAACTTGCTGAGCCATGGAAACAGTGCACGCCTCACTCCTCTGAGATATGACCTTAGAGATCGCATTACCAGACTTGGAGAAATTCAATATAAAATGGATGAAGATGGTTTTCTCAGGCAAAGAGGCAATGAGATCTTTGAGTACAACTCTAATGGTCTGCTGAACAAAGCATACAACAAAGTGTCTGGCTGGACTGTTCAATACTGTTATGATGGTCTTGGAAGACGAGTTGCAAGCAAATCAAGCCTGGGACAACACCTGCAGTTCTTTTATGCTGATCTCTCCAACCCAATACGAGTTACTCACTTGTACAATCATAGTAGCTCAGAAATAACATCTCTGTATTATGATCTTCAAGGTCATCTCATTGCAATGGAATTAAGCAGTGGAGAAGAATATTATGTTGCTTGCGATAACACTGGAACACCTCTTGCTGTATTTAGCAGTCGGGGCCAAGTCATAAAAGAAATTTTGTACACCCCATATGGAGAGATCTACCAGGACACTAACCCAGATTTCCAGGTTGTCATTGGTTTTCATGGAGGGCTCTATGATTCTCTCACCAAATTGGTTCATCTGGGTCAGCGGGATTATGATGTTATTGCTGGTCGGTGGACAACACCAAACCATCACATATGGAAACACCTGAATGCTGTCCCACAACCATTCAATCTCTACTCATTTGAAAATAACTACCCAGTTGGCAGGATCCAAGATGTTGCTAAGTATACAACAGGTAA .....x..x....:.x.x.....:...x.x...........x...x.x........x..:........:......:....:---..:..x..x..x..:.......x::....x..:..:.....x.....:...........:.:x.x:.x...::.:.......::::...:..:.....:.....::.x..x..xx........x.x..:..::.:..xx.:..x:....:....xx:....x..:xx:...::...:x......:x:.x.xx..::.x..:..:..:..x:...:...xx.:::x........x..x..:...........:.....:..x:.:::x.xxx.x..x..xx:x:.x..xx:xxx......:.:...xx::...x:......:.......:......x.....:..:..x..x.x:x.x.....x..:.:xxx......x....:......:..x.....x...x..x.:..:....:..xx:.x........:..:..x..x..:..xx.x........xx....:x.x..:..:x....x..x..x:........x::x................:..xx.x.....:....xx..:........:..:.:...:..x..x..x..:.x:x:..:x....::....xxxx.........x..xxxx...:.......:..:..x.....:..x...x.x......x.x..:..:.....:...........:...........::.xx.:x.:..x.:xx.::.......:x.x.....:...xxx..:........x..x..:..............:.....x.....:x....x......x.x........:..x....x:...:....x.xx........x..:.....x..x.....:..:..:..:x:x..x.xx:.xx.:...x.:...:x......:x.......:..:.....::xx...x....:x:x..:..:..:x.x..x.....x........x..x..x.....::.x...........::.:..::.x..xx.:x.:........::..x.x..x..x..............x:..xxxx.x..x......x:xx.x::x:xx.x....xxx..x..:..::.x...x::...:::......x....x.:x:...::.....x..:..x:xx:.x..:.:x........ 81M3D1145M 836/1226 68.2% 1226/94230402 0.0% 3/1226 0.2% 167150182 23064373 +3381 chr4 + 190214555 182796634 182796633 182796758 125 TAGATGTTAACAGCTGGCTGGTGACATTTGGTTTCCATCTGCACAATGCTATTCCTGGATTCCCTGTTCCCAAATTTGATTTAACAGAACCTTCTTACGAACTTGT------------GAAGAGTCAGCAGTGGGAT chr4 + 94230402 15644201 15644200 15644337 15644201 15644200 15644337 137 TAGACATTGGAAGTTGGCTAGAGCTATTTGGTTTCCAGTTGCACAATGTACTACCTGGGTTTCCAAAACCAGAAATCGAAGCTTTGGAGACAACATATGAACTTCTACAGCTTCAAACAAAAACCCAGGAGTGGGAT ....::..::x..:.....:.x.x:............x:.........:xx.x.....:..:..x:xx..x:..x.:..xx:xx::..:x.xx.x..:......x.------------:..:.x:...x........ 106M12I19M 80/125 64.0% 137/94230402 0.0% 12/125 9.6% 167152433 23062122 +20111 chr4 + 190214555 182799710 182799709 182800352 643 CTGTGGTTCGCCACGGTCAAGTCGCTGATCGGCAAGGGCGTCATGCTGGCCGTCAGCCAGGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCCGTGCTCAACAACGCCTTCTACCTGGAGAACCTGCACTTCACCATCGAGGGCAAGGACACGCACTACTTCATCAAGACCACCACGCCCGAGAGCGACCTGGGCACGCTGCGGTTGACCAGCGGCCGCAAGGCGCTGGAGAACGGCATCAACGTGACGGTGTCGCAGTCCACCACGGTGGTGAACGGCAGGACGCGCAGGTTCGCGGACGTGGAGATGCAGTTCGGCGCGCTGGCGCTGCACGTGCGCTACGGCATGACCCTGGACGAGGAGAAGGCGCGCATCCTGGAGCAGGCGCGGCAGCGCGCGCTCGCCCGGGCCTGGGCGCGCGAGCAGCAGCGCGTGCGCGACGGCGAGGAGGGCGCGCGCCTCTGGACGGAGGGCGAGAAGCGGCAGCTGCTGAGCGCCGGCAAGGTGCAGGGCTACGACGGGTACTACGTACTCTCGGTGGAGCAGTACCCCGAGCTGGCCGACAGCGCCAACAACATCCAGTTCCTGCGGCAGAGCGAGATCGGCAGGAGGTAAC chr4 + 94230402 15645830 15645829 15646472 15645830 15645829 15646472 643 CCGAGGTTTGCAGCTATTCCTTCAGTATTTGGAAAAGGCATCAAATTTGCTATCAAGGATGGCATCGTCACAGCGGACATTATTGGTGTGGCTAATGAGGACAGCCGGCGCATCGCTGCCATACTCAACAATGCTCACTATCTGGAGAACCTACACTTCACCATAGAGGGCCGGGACACGCATTACTTCATCAAGCTGGGGTCTCTGGAAGAAGATTTGTCCCTAATTGGCAACACTGGTGGACGACGCATCCTGGAGAATGGTGTGAATGTCACAGTGTCGCAAATGACTTCCGTGATCAATGGGAGGACTAGACGCTTCGCTGACATACAGCTGCAGCATGGCGCACTGTGCTTTAACGTTCGCTATGGAACAACCGTGGAAGAGGAAAAAAACCATGTCCTAGAGGTAGCCAGGCAGAGAGCTGTGGCTCAGGCCTGGACTAAGGAGCAGAGACGGCTGCAGGAAGGGGAAGAGGGGATTAGGGCATGGACAGATGGAGAGAAACAGCAGCTTCTAAACACTGGGAGGGTACAAGGTTATGATGGATATTTTGTTTTGTCAGTGGAGCAGTATCTCGAACTTTCTGACAGTGCCAATAATATTCACTTTATGAGACAGAGTGAAATAGGCAGAAGGTAAC .:.x....:..x:.x:.:xxx..:x.:x.:..x..:...:...x::.x..::...:xx.x...xx...xxx::.x:..:.xx.:::::.x..:..:......x..xxxx:x:.x..x...:.:........:..::x...:...........:...........x......x:.........:............x:x:xxx.x.:x..:::x..::..xx.x::x.xx.xxxx..::.:..x..xx:x::x........:..::.x..:..x..:........:x:x..:x.x...:.x..:..x.....xx.xx.x.....x...:.:x..x.....:x:.....:...xxx:.xx....x.....:..x.::...x....x.....:..::xx.:::....:...xx:..xx.....x.x..xx.x..:.:.......:.xx:x......x::..xx...:x..x..x..:.....x::xx.xx:x.....:..x..x.....:.:......x..:.:.:.:..x.:...:..:..:..:..:..:..:.x:..x:.x..:...........:.:...:..xx.:.....:.....:..:..:..x..:x..x.:.....:..:..x.....:....... 643M 399/643 62.1% 643/94230402 0.0% 0/643 0.0% 167153880 23060675 +3416 chr4 + 190214555 182807675 182807674 182807718 44 CTGTCTCTCTCTCTCTCTCTGTCACACACACACACACACACAGA chr4 + 94230402 75248049 75248048 75248092 75248049 75248048 75248092 44 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACagaga ..x:................x...................x... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 107559626 82654929 +3168 chr4 + 190214555 182807679 182807678 182807717 39 CTCTCTCTCTCTCTCTGTCACACACACACACACACACAG chr4 + 94230402 12601304 12601303 12601342 12601304 12601303 12601342 39 CTCTCTCTCTCTCTCTCTCACACACGCACACACACAAAG ................x........:..........x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 170206375 20008180 +5503 chr4 + 190214555 182808875 182808874 182809024 150 GTGTGTGTTTGCATATGTGTGCACGTGCTGTG--GGTGTGTGCATGTGCACGCATGTGTGTGCATGTGCGTGTGTGCAGGCATGTGTGCATGTGTGCATGTGCGTGTGTGTGCATGTGTGTTTGTGCATGTGTGTGTGCATGTGTATGTGTG chr4 + 94230402 5214175 5214174 5214316 5214175 5214174 5214316 142 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGC----------GCAAACGTGTGTGTGCATGCAGATGTGTG ...x.x..x..x.....x.::..xxx..x...--......:x....x........x:.....:::.::x....x....x:..::.x.:.:...:.....x...:.........----------.::x.:.............::x....... 32M2I79M10D29M 100/140 71.4% 142/94230402 0.0% 12/140 8.6% 177594700 12619855 +3062 chr4 + 190214555 182831835 182831834 182831928 94 CTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCCTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCC chr4 + 94230402 53764535 53764534 53764628 53764535 53764534 53764628 94 CTTTGCTTTTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..::x..::...:.......:.....::.:.:.....::.x:x.:.x::......:x:.:::..x:.::::..:x.:..:x:.x::........ 94M 53/94 56.4% 94/94230402 0.0% 0/94 0.0% 129067300 61147255 +3365 chr4 + 190214555 182832312 182832311 182832399 88 CTTCTCCTCTCCCCT----CCTTCTCCTCTCCCTTCCTTCTCCTCTCCCTTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCT chr4 + 94230402 92917602 92917601 92917693 92917602 92917601 92917693 92 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCT .....:....x:x..----..x..:..::.:.:x:.:..:.......x......:.:....::...::......:xxx.x::.:..:..... 15M4I73M 58/88 65.9% 92/94230402 0.0% 4/88 4.5% 89914710 NA +5678 chr4 + 190214555 182833001 182833000 182833332 332 CTCTCCCCTCCTCCTTCTCCT--CTCCCCTCCTTCGCCTCTCCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCT---CCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCTCTCCTTCTCCTC-TCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCC-CTCCTCCTTCTCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTG-GCCTCTCCCCCGCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCT chr4 + 94230402 2378637 2378636 2378976 2378637 2378636 2378976 340 CTGTCCCCATCTCCTGCCTGTGGCCCCCATCCTCTGACAGCCCCATCCCCACAGTCCCCATCCCCTGCCACCCTGTGCCCATATCCCCGTGACCCGCTGCCCCCATTCCCATGGCCAGGTCCTCATGCCCCTTGTCCCCATTCCCTGCCATCCGATGCCCACATCCTTGTGCCCCACTGCCCCCATCCCCTTCCACACTCACGCCCCATTCTCTGCCACCTCCATGCCCACATCCTCCCGTCCCATTGTCCCTGTTCCCAGCGCCACAACCCCGTGCCTCCTCCCCACTACTGCGTCTCGCTAACCCCATCCTCATGCCCCTCACCCCACTCTGTCCCCT ..x.....x:.....x.::x.--.:...x....::.x.xx:...x::..:x.xx.....x:.:...x.:x.:..---...x.x:..:.x.xx:..x..x...:.x:::..x.xx..xxx:..::x:x.:....x...:.-.:....x..x...xx:x.:.x.x....:x.x.:..x..x...:.x...:::...x.x.:.-.x..:.x......x:.x.....x.x:..x.x:..::..x:.::x.:x..:.:x:...:x.-...x.xx.....:x.......:..x..x..x.x....x::xx...:x:....x.x.:....x....x.:.:x:.::.. 21M2I51M3I62M1I60M1I60M1I78M 193/332 58.1% 340/94230402 0.0% 8/332 2.4% 180454364 9760191 +3120 chr4 + 190214555 182833013 182833012 182833095 83 CCTTCTCCTCTCCCCTCCTTCGCCTCTCCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCC chr4 + 94230402 93139001 93139000 93139083 93139001 93139000 93139083 83 CCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC ..x.:...::x.:::...::......:....:x::...xxx.:x:.:....:x.:...xxx.....:......:......:.. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 89694012 NA +3010 chr4 + 190214555 182833379 182833378 182833470 92 TCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCC chr4 + 94230402 93138992 93138991 93139083 93138992 93138991 93139083 92 TTTTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC .::.:...x:.x.:....:x.:.::::.:.x:......:.:x.:...xxx.:x:.:....:x.:...xxx.....:......:......:.. 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% 89694387 NA +3010 chr4 + 190214555 182833578 182833577 182833669 92 TCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCC chr4 + 94230402 93138992 93138991 93139083 93138992 93138991 93139083 92 TTTTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC .::.:...x:.x.:....:x.:.::::.:.x:......:.:x.:...xxx.:x:.:....:x.:...xxx.....:......:......:.. 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% 89694586 NA +3438 chr4 + 190214555 182833756 182833755 182833890 135 CCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCT---CCCCTCCTCCTTCTCCT--CTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCCCTCCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .:..:..::.x.x..xx.x..x:.:..:.:..:x.:::::.....::x..:.:::....:......:...:....---.x:..:.....:..x..--x.:.x:.:....x...x:....:x::.x:::.:.::....x.. 75M3I17M2I43M 79/135 58.5% 140/94230402 0.0% 5/135 3.7% 89916154 NA +3035 chr4 + 190214555 182833946 182833945 182833987 42 TCCCCTCCTTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCT chr4 + 94230402 47060627 47060626 47060668 47060627 47060626 47060668 42 TCCCTTCCTTCTTCCCTCTCCCTCCTCCTCTCCTCTTTTCCT ....:.......:.....::...:.........:..::.... 42M 34/42 81.0% 42/94230402 0.0% 0/42 0.0% 135773319 54441236 +3010 chr4 + 190214555 182834186 182834185 182834277 92 TCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCC chr4 + 94230402 93138992 93138991 93139083 93138992 93138991 93139083 92 TTTTTCTTGCCATTTCCCTGCTTTTCCCCCGCCTCCCCCCTATTTCCAGGCTGTTTCTCCCACCCCTGAGCCCTCTCCTCCTCCTCCTCCCC .::.:...x:.x.:....:x.:.::::.:.x:......:.:x.:...xxx.:x:.:....:x.:...xxx.....:......:......:.. 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% 89695194 NA +3307 chr4 + 190214555 182834402 182834401 182834536 135 CCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCT---CCCCTCCTCCTTCTCCT--CTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCC chr4 + 94230402 92917602 92917601 92917741 92917602 92917601 92917741 140 CTTCTTCTCTGTGCTAGCACCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC .:..:..::.x.x..xx.x..x:.:..:.:..:x.:::::.....::x..:.:::....:......:...:....---.x:..:.....:..x..--x.:.x:.:....x...x:....:x::.x:::.:.::.:..x.. 75M3I17M2I43M 78/135 57.8% 140/94230402 0.0% 5/135 3.7% 89916800 NA +3642 chr4 + 190214555 182845453 182845452 182845513 61 TCTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGCAAGGCTGGAATGAAACGGCATGA chr4 + 94230402 22359255 22359254 22359315 22359255 22359254 22359315 61 TTTTACTTTTTTTGTTTGTTTGTTTTTTGAGACAGAGCAAAGGTTGTATGAAACAGCAGGA .:..x........x...x...x..................:.x.x.x.......:...x.. 61M 50/61 82.0% 61/94230402 0.0% 0/61 0.0% 160486198 29728357 +3020 chr4 + 190214555 182847388 182847387 182847439 52 AAAAAAAGAAAGAAAGAAAGAAAAAAGAAAGAAAGAAAAAGAAAGAAAGGAA chr4 + 94230402 38128979 38128978 38129030 38128979 38128978 38129030 52 AGAAAAGGCAATAAAAACAGAAAGAAAAAATAAAGAAAAAGAAAATAAGGAA .:....:.x..x...:.x.....:..:...x.............:x...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 144718409 45496146 +3686 chr4 + 190214555 182864437 182864436 182864516 80 AGTGGTGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAAAATCGCTTGAACCCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......x::.--......:...........::........x.xx.x:..x.:...........:..x:xx:.....:.. 11M2D67M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% 106831237 83383318 +3279 chr4 + 190214555 182871622 182871621 182871728 107 CTCTGTCTCAAAAAAACAAAACAAAA-----------CAAAACAAAAAAAAAACGCAATCAAGAAATATGATCATGACTCTACATGAAACCCATCAATAATTCTTCATTTGCAGAATA chr4 + 94230402 55865378 55865377 55865486 55865378 55865377 55865486 109 CTCCTTTTAAAAAAGAAAAAACAAACACCAACCACACCAAAACAAACAAAACACACAACCAAACAACAAGAATAAGAATGTACACAAAACCCACCTGTA---------TTCCAGAATA ...:x.:.x.....:.x........x-----------.........x....x..:...:...:x..:.x..x:.x..x.x....::.......:.x:..---------..x....... 26M11I62M9D10M 72/98 73.5% 109/94230402 0.0% 20/98 20.4% 127006244 63208311 +3471 chr4 + 190214555 182879581 182879580 182879652 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGGGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::........x.xx.x...x::.........:.::.x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 106846375 83368180 +3143 chr4 + 190214555 182882959 182882958 182883013 55 GAGAGAGAGAGAGAGACAGAGAAAAAAAAAGAAAGAAAAAGAGAAAGAAAGAAAG chr4 + 94230402 19037111 19037110 19037165 19037111 19037110 19037165 55 GAGACATAGAAATAGACATAGGAAAATAAAGAAAAAAAAAGAAAAAGATAGATAG ....x.x...:.x.....x..:....x.......:.......:.....x...x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 163845848 26368707 +3705 chr4 + 190214555 182900185 182900184 182900258 74 GTGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGGACTGCTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.:.........::........x:xx.x.:.x::.....:.....:..x.:x:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 106866981 83347574 +3080 chr4 + 190214555 182908663 182908662 182908720 58 ACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAA chr4 + 94230402 18047933 18047932 18047990 18047933 18047932 18047990 58 ACAGAACAACCCTTTTTCTTAAAAAAAAAAAACAAAAAAAACTGAAGACGACAAAAAA .....:...xx..:.x...:............x........xx.....x..x:..:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 164860730 25353825 +3020 chr4 + 190214555 182908684 182908683 182908737 54 AAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAATAAAGAAGGA chr4 + 94230402 66803524 66803523 66803577 66803524 66803523 66803577 54 AAAGCAGAGAAAGAAAAAAAAAGAAGAAGAAAAAGGAGGGGTAGTAGGTAAGGA ...:x.:.:...:..................:...:..::.x.:..::x..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 116105160 74109395 +3061 chr4 + 190214555 182913976 182913975 182914023 48 TTCTTTGTTTTTGTTTTGTTTTTTGTTTGTTTGTTTTTGTTTTGTTTT chr4 + 94230402 83374202 83374201 83374249 83374202 83374201 83374249 48 TTCTTTGATTTATCTGTGGTATTTGTTTGTTTGTTTTTGTTTTGTTTT .......x...xx:.x..x.x........................... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 99539774 90674781 +3001 chr4 + 190214555 182938855 182938854 182938941 87 AGGGTTTCATTGTGTGTGTGTGTGCGTGTGTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTCTTTTTTTAGGAGTCTTGTTCTGT chr4 + 94230402 12151604 12151603 12151690 12151604 12151603 12151690 87 AAAGTCACATTTTTTGAGTTTTGGGGTGGGTTTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTTTTGGGGGTTTTTGTTCTGT .::..:x....x.x..x..x.xx.x...x....:..x....xx:..xx..:.x......x...x......x:..:x.:......... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 170787251 19427304 +3129 chr4 + 190214555 182938867 182938866 182938921 55 TGTGTGTGTGTGCGTGTGTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTCTTT chr4 + 94230402 41434327 41434326 41434381 41434327 41434326 41434381 55 TGTGTGTGTGTATGTGTGTTTTCTCTCTTTTTTTGTTGTTGTTTCCTTTTCCTTT ...........::........::.:.:....:..x..x:.x...::....:.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 141504540 48710015 +3297 chr4 + 190214555 182947628 182947627 182947701 74 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCTGGGTGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:...........::........x.xx.x...x::........::.:x.x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 106914424 83300131 +3212 chr4 + 190214555 182955224 182955223 182955294 71 GAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGAAAGGCCACGTAG chr4 + 94230402 16379592 16379591 16379662 16379592 16379591 16379662 71 GAGAAGAACCTTGTCCCCAAAAAATGAAAAACAAAATAGGAAAGAAGGAGAAATAAGGGAAGAACACAAAG ...x.::...:....:.x......x:.....x....x.::.......:....:x.::.:...:x...:x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 166575632 23638923 +3080 chr4 + 190214555 182956502 182956501 182956547 46 AATTTTGTGCTCCAAGTTTGTGTTGTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 65665345 65665344 65665390 65665345 65665344 65665390 46 AATTTGGTATTTTGAGTTTGTGTTGTTTTATCTTTTTTTTTTTTTT .....x..::.:::...............x.:.............. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 117291157 72923398 +3242 chr4 + 190214555 182959877 182959876 182959987 111 AAATAAGAGAC-----ACCTGGCGATTTTTATTGTGCATGTGTTTACAAAATCTTGCTTCAAATGAATTATATCATTTATAGCACTTTGTCATGCAATCTTATGGCATGCAGCTTC chr4 + 94230402 25435987 25435986 25436100 25435987 25435986 25436100 114 AAATGGAAGACCTCAGAACTGAAGACATCAATTCCATCAGTGCCTTCTAAAACTT--TTCAAAAGTATTATGTCATTGTTGTCACTATGTCTTATAAGCTTATGGCATGTAGTTTC ....:::....-----.x...:x..:x.:x...x:::xx...::.x.x...x...--......x.x.....:.....xx.:x....x....x.::..x...........:..:... 11M5I39M2D59M 74/109 67.9% 114/94230402 0.0% 7/109 6.4% 157523890 32690665 +3333 chr4 + 190214555 182970819 182970818 182970892 74 GGAAAGAAGGAAGAAAGGAAGGAAGGAGTGGGGATGTAGGGAGGAAGGAAGGGAAGGGAGAGAAGGAAGGAAGG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGA--GAAGAAATGAGTATGAGTCAAGGTAGG ..:......::.........:.......x.....x.:....:...--....::.x.:.x:x..:xx....x... 45M2D27M 53/72 73.6% 72/94230402 0.0% 2/72 2.8% 172295398 17919157 +3238 chr4 + 190214555 182970910 182970909 182970997 88 GGAAAGGAGGGAGGGAAAAAAGGAAGGAAAAAGGGAAGGAAAAAAGGAAGGGAGGGAGGGAGGGAATAAAGGAAGGAAGGAGGGAGGG chr4 + 94230402 18344030 18344029 18344116 18344030 18344029 18344116 87 GGAAAGGGAGGAGGAAGAGGAGAGAGGGAACAGGGAAGGAAAATAGCAA-GTAGGAAATGGGAGCCTCCAAGTGGAAAGAGGAGAAGG .......::.....:.:.::..::...:..x............x..x..-.x...:.:x.:.:.xx.xx.:.x:.:...::.:..:.. 49M1D38M 57/87 65.5% 87/94230402 0.0% 1/87 1.1% 164626880 25587675 +3217 chr4 + 190214555 182970921 182970920 182970989 69 AGGGAAAAAAGGAAGGAAAAAGGGAAGGAAAAAAGGAAGGGAGGGAGGGAGGGAATAAAGGAAGGAAGG chr4 + 94230402 73744717 73744716 73744785 73744717 73744716 73744785 69 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAG .::.:......:....:...:.....:..:......:::::....:...:.x.::xx.:..:x....:. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 109226204 80988351 +4358 chr4 + 190214555 182970977 182970976 182971163 187 AAAGGAAGGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGA--AGGAAGGGAGGGAG--GGAGGGAATAAAGGAA---------GGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAA------------AGAGAGAGAAAGAAAGAGAGAAAGGAAGGAAGGGAGGGAGGGAGGGAGGG chr4 + 94230402 17246042 17246041 17246250 17246042 17246041 17246250 209 AAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTAATCATCATTCATCAGTGAG---AAGAAAGATAAAATGAGAAGATGTTGGCGGGGGAGACAGGG .....x..x:.:xx.:..:x..:.x..x::x....:..........x......x:xx.:....x...:x.--..xx....x..:..--........x:....:.---------..::...:.:.:..x:.:.x..x.:...:....:x..------------..x...---........x.:..x.::.:..x.xx:.x.:.....:x.... 70M2I14M2I16M9I37M12I6M3D41M 123/184 66.8% 209/94230402 0.0% 28/184 15.2% 165724935 24489620 +3237 chr4 + 190214555 182970999 182970998 182971083 85 GGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGAAGGAAGGGAGGGA----------GGGAGGGAATAAAGGAAGGAAGGA chr4 + 94230402 61683535 61683534 61683629 61683535 61683534 61683629 95 GAAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAA .::..:.:.......x...:.:::x.x.::.........:.:x..:...........x...----------:...:.:x..x.....:x.:..:. 61M10I24M 58/85 68.2% 95/94230402 0.0% 10/85 11.8% 121287464 68927091 +3877 chr4 + 190214555 182971070 182971069 182971210 141 AAAGGAAGGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGA--AGGAAGGGAGGGAG--GGAGGGAGGGAGGGAAAGAGAGAAAGAGAGAGAAAAAGAGAGAA----AGAAGTGGAAGTA chr4 + 94230402 17246042 17246041 17246190 17246042 17246041 17246190 149 AAAGGTAGTGAATTGAGAATGAAGTAACAGCAGAAGAGAAAGAAAGTGAGAGATGTTAGGAGATAAAACACGAGCCAGGGCGGAAGCTGGAGGGAAGGAAGGGAAAAGCCATTGGGGGGAAGAAAGGCAGAATGGTAGGAAGAGAAGTA .....x..x:.:xx.:..:x..:.x..x::x....:..........x......x:xx.:....x...:x.--..xx....x..:..--.......:...:..:..:..xx.xx.:.:.::.:....:x....----..:.:x:...... 70M2I14M2I44M4I13M 93/141 66.0% 149/94230402 0.0% 8/141 5.7% 165725028 24489527 +3151 chr4 + 190214555 182971092 182971091 182971179 88 GGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGAAGGAAGGGAGGG-----------AGGGAGGGAGGGAGGGAAAGAGAGAAAG chr4 + 94230402 61683535 61683534 61683633 61683535 61683534 61683633 99 GAAAAAGGAAGAAAATAAAAAGGATGCGGAAAAGAAAGAAAATAAAGAAGGAAGGGACGGATGTCCTTTATAGGAAGATATCAAGGAGTGGAGAAAAAG .::..:.:.......x...:.:::x.x.::.........:.:x..:...........x..-----------...:..:x.xx:...::x:....:.... 60M11I28M 59/88 67.0% 99/94230402 0.0% 11/88 12.5% 121287557 68926998 +3612 chr4 + 190214555 182971140 182971139 182971225 86 AGGAAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGAGAAAGAGAGAGAAAAAGAGAGAAAGAAGTGGAAGTACCTTCACTTTTCAAA chr4 + 94230402 94050835 94050834 94050919 94050835 94050834 94050919 85 AGGAAGAG-GGAAAAGAAGGAGGGAGGAAAAGACAAAAAGTGGATGCAAAGGTTAGAGAGAAGAAGAAAAGCATTCACTCTTCCAA ......:.-..:.::..:.........:.....x.:....x.::x.x...:.xx...:.....x:...:x:.x......:...x.. 8M1D77M 60/85 70.6% 85/94230402 0.0% 1/85 1.2% 88920305 NA +3193 chr4 + 190214555 182975069 182975068 182975137 69 CGGTGGCATGCGCGCGTAGTCCCAGCTACTTGGGAGGCTAAGCAGGGAGGATTGCTTGAGCCCTGAGGC chr4 + 94230402 76033199 76033198 76033265 76033199 76033198 76033265 67 CAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC .:....--...:..:.....:...........::.....:...xxx.x.:.x::.....:...x..:.. 6M2D61M 49/67 73.1% 67/94230402 0.0% 2/67 3.0% 106941870 83272685 +3067 chr4 + 190214555 182976622 182976621 182976675 54 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTGAGG chr4 + 94230402 27719994 27719993 27720047 27719994 27719993 27720047 54 TTTAAGAAGAAAAGAGGAAAAAGAAAAAAGAAGGAGAAATAAAAGAGATTGAGG .:.x.:..:....:.::.....:......:..::.:...x....:......... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 155256628 34957927 +3710 chr4 + 190214555 182985477 182985476 182985555 79 GTGGTGGGCACCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAAGAGAATCACTTGAATTCAGGAGGCAGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--...x....:.:.........:..:........x.xx.x...x........::...:..x:xx:.....:.. 6M2D71M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 106952276 83262279 +3056 chr4 + 190214555 182988331 182988330 182988382 52 AGTGAGACTCAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAT chr4 + 94230402 10047687 10047686 10047738 10047687 10047686 10047738 52 AATGTGACTGAAACTTAAAAAAAAAAAAAAGAAGAAAAGGTAAAAAATATAT .:..x....x.:x..:..............:..:....::x........... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 172940644 17273911 +3251 chr4 + 190214555 182988334 182988333 182988409 76 GAGACTCAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACA chr4 + 94230402 1494989 1494988 1495055 1494989 1494988 1495055 67 GAGATTCAG---------GGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ....:....---------::...x.:.........x.:...............:.:..:...:...:.x.:.::.. 9M9D58M 51/67 76.1% 67/94230402 0.0% 9/67 13.4% 181493345 8721210 +3567 chr4 + 190214555 182988348 182988347 182988440 93 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACACACACACATATGCTAACCAAA chr4 + 94230402 78347565 78347564 78347655 78347565 78347564 78347655 91 AAAAACAACAAAACAAACAAGAAAAAAACCAACACAATTACATATATATACACACACACACACTCA-ATGCAGCTAC-CACACACTGACCAAA .....x..x....x...x..:.......xxx.:.:.xx..:.........:............x..-.::..xx:..-..:.::..:...... 66M1D10M1D15M 67/91 73.6% 91/94230402 0.0% 2/91 2.2% 104640783 85573772 +3158 chr4 + 190214555 182988352 182988351 182988407 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x.:.::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 181493352 8721203 +3343 chr4 + 190214555 182988362 182988361 182988450 89 AAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACACACACACATATGCTAACCAAATGTAGCAATG chr4 + 94230402 74671056 74671055 74671137 74671056 74671055 74671137 82 aAGAATATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATA-------GCTAAAAAAAATTAAAAATG ..:..x.x.x.....x..xx.:..............................x.x.x.x.:.-------.....xx...xx..:x.... 62M7D20M 63/82 76.8% 82/94230402 0.0% 7/82 8.5% 108317306 81897249 +3089 chr4 + 190214555 182988376 182988375 182988414 39 AATATATATATATATATATATATACACACACACACACAC chr4 + 94230402 85078509 85078508 85078547 85078509 85078508 85078547 39 AATATATACAGATATCTATATATACACACACACACACAC ........:.x....x....................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 97909867 92304688 +3036 chr4 + 190214555 182988380 182988379 182988419 40 TATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409082 4409081 4409121 4409082 4409081 4409121 40 TGTACATATATATATATATACACACACAGAGACACACACA .:..:.......................x.x......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 178579298 11635257 +3111 chr4 + 190214555 182988920 182988919 182988996 77 AGCCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAAGAGAGACACATAGAAGAATCGGATAGAAAGGAACAAAA chr4 + 94230402 89572262 89572261 89572326 89572262 89572261 89572326 65 AATCAACAGAAAAAAAAAAAAAAGAGAGAGAGAGAACAGTAAAGGCACA------------ATAAAAATGATTAAAA .::...x.:..........................:x.:x.:..:....------------...:...x..x:.... 49M12D16M 51/65 78.5% 65/94230402 0.0% 12/65 18.5% 93416658 NA +3430 chr4 + 190214555 182988922 182988921 182988976 55 CCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAAGAGAGACACATAGAAGAA chr4 + 94230402 44890389 44890388 44890443 44890389 44890388 44890443 55 CCACAAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGAA ...x..::.........................:.:...:.x...:xx.:..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 138098533 52116022 +3004 chr4 + 190214555 182988924 182988923 182988958 35 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAA chr4 + 94230402 75300457 75300456 75300491 75300457 75300456 75300491 35 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .................:..............:.. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 107688467 82526088 +3006 chr4 + 190214555 182988926 182988925 182988966 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAAGAGAGACA chr4 + 94230402 66158979 66158978 66159019 66158979 66158978 66159019 41 AAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCA ...::.......:....................:x...:.. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 116829947 73384608 +3849 chr4 + 190214555 182996693 182996692 182996793 101 CATGGTGGTGCATGCCTGTGGTCTCAGCTACTTGGGAGGTTGAGGTGGAAGGATCACTTGAGCCCAGGAGTTCGAGGCTGCAGTGAACCAAGATCATGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..::........:.--...:..::..........::...:....x:xx:x.:.x.......:.....:..:.:x:.....:..------..x..x...... 14M2D67M6D12M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 106963496 83251059 +3545 chr4 + 190214555 183013235 183013234 183013406 172 GTTTCTGG--AAGCGGAAATCTTGTC--ACTTTCCTTCATCATTCGTTTTTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTT-----CTTCCTCTTCCTCTTCTCTTCCTCTTCTCCTCCTTCTCCTCC-TCCTTCTCCTCCTCCT chr4 + 94230402 50176249 50176248 50176425 50176249 50176248 50176425 177 GTTTCTGGCAAGATGGATTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCAT-----TGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCT ........--.:::...xx.::....--...x::..:.x.:x...x...x.:.x:..x...::x.x.-----.x.....:..x...:.:x.x...x.::.:x..:....:..::::.:-----.:x....::.x.:....:x..::.....::..:.........-.:....x.x.x::... 8M2I16M2I39M5D46M5I42M1I16M 105/167 62.9% 177/94230402 0.0% 15/167 9.0% 132836986 57377569 +3328 chr4 + 190214555 183013285 183013284 183013357 73 TCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTT chr4 + 94230402 34908183 34908182 34908255 34908183 34908182 34908255 73 TCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTCTT ....xx...x:.........:......x.:..:.......xx..x:.xx.x.x...x..x..x.......... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 148105102 42109453 +3089 chr4 + 190214555 183013296 183013295 183013368 73 TTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCTCTT chr4 + 94230402 76394490 76394489 76394562 76394490 76394489 76394562 73 TTCCTTCATCTCTCTCTCTTTCTCCTGCCCTCCCATTGATTCCATCTCCTTTTTTTCTTTTGCCTCTGCTCTT .....:.x::...::.....:.....x::..:..x:.xx:..:x:.....:..:...:.:.x.....x..... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 106618806 83595749 +3072 chr4 + 190214555 183024419 183024418 183024456 38 TCAATTTAGAAAAAAAAAAAAAGAGAGAGAAAGAGAAA chr4 + 94230402 28855154 28855153 28855191 28855154 28855153 28855191 38 TCAGTTTAGAAAAAAAAAAAAAGAGAGAGAGAGATAAA ...:..........................:...x... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 154169265 36045290 +3379 chr4 + 190214555 183025500 183025499 183025569 70 CAGTGGCTCACACCTGTAGTCCCAGCACTTTGAGAGGCTGAGGCATGTGGATTACTTGAGCTCAGGAGTT chr4 + 94230402 76033199 76033198 76033266 76033199 76033198 76033266 68 CAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCT ......:x...:--......:.....xx:....:........x.x....:.x:......:.:...:..:. 12M2D56M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 106992301 83222254 +3599 chr4 + 190214555 183027931 183027930 183027987 57 GGATATATGTATA-TGTATATAGATGGGTTATATACACACACACACACACACACACAC chr4 + 94230402 73857053 73857052 73857110 73857053 73857052 73857110 58 GAATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCAC .:........:..-.:..........x:............::.........:..x... 13M1I44M 48/57 84.2% 58/94230402 0.0% 1/57 1.8% 109170878 81043677 +3015 chr4 + 190214555 183054478 183054477 183054524 47 AAAAAAAAACACAAAAAATGTGTTATGGTTTTTTTTTTTTTTTTTTT chr4 + 94230402 72071167 72071166 72071213 72071167 72071166 72071213 47 AAAAAACAACACAAAAAACTTGCAAAGCTTTTTTTTTTTTTTTTTTT ......x...........:x..:x.x.x................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 110983311 79231244 +3113 chr4 + 190214555 183056524 183056523 183056582 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATTGCTTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x.:.x::.........:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 107023318 83191237 +3227 chr4 + 190214555 183058102 183058101 183058157 56 TTTTTTGTTTTTTTGTTTGTTTGTTTGTTTGGTTTGTTTTGTTT---CTTGAGAAAGAG chr4 + 94230402 55690038 55690037 55690096 55690038 55690037 55690096 59 TTCCTTGATTTTTTTTTTGTTTGCTTGTTTGTTTTGTTTTGTTTTTCCCCAAGGAAGAG ..::...x......x........:.......x............---.:::..:..... 44M3I12M 46/56 82.1% 59/94230402 0.0% 3/56 5.4% 127368064 62846491 +3183 chr4 + 190214555 183113138 183113137 183113214 77 GGTGCATACTTGTAATCTCAGCTACTTGAGAGGTTGAGGCAGCAGAATCACTTGAACCTGGAAGGCGGAGGTTGCAG chr4 + 94230402 76033203 76033202 76033277 76033203 76033202 76033277 75 GGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......--.x....:.::...........:...:....x.xxxx...x..........::....x:xx:..:..:.. 6M2D69M 54/75 72.0% 75/94230402 0.0% 2/75 2.7% 107079935 83134620 +3070 chr4 + 190214555 183113481 183113480 183113551 71 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGCGCGCACATGCACGTGCATGCAA chr4 + 94230402 79265520 79265519 79265590 79265520 79265519 79265590 71 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACAA ............::........xx...:.:.:::.:.:..:.:.::.:...:x....::x:...:x::... 71M 45/71 63.4% 71/94230402 0.0% 0/71 0.0% 103847961 86366594 +3130 chr4 + 190214555 183113482 183113481 183113550 69 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGCGCGCACATGCACGTGCATGCA chr4 + 94230402 79265519 79265518 79265587 79265519 79265518 79265587 69 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCA .............::........xx...:.:.:::::.:..:....:.:....x.:::.:x..::.x.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 103847963 86366592 +3095 chr4 + 190214555 183113484 183113483 183113548 65 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGCGCGCACATGCACGTGCATG chr4 + 94230402 79265519 79265518 79265583 79265519 79265518 79265583 65 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTG .............::........xx...:.:.:.:::.:....:..:.:.:..x:..::.x::.. 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% 103847965 86366590 +3048 chr4 + 190214555 183117212 183117211 183117257 46 CTTCTTTTTTTTTTTTTTTTTTTTTTTTTGATGGAGTCTTGCTCTG chr4 + 94230402 61949761 61949760 61949806 61949761 61949760 61949806 46 CTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTG ........:...:...:............::....x.:..:..:.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 121167451 69047104 +3670 chr4 + 190214555 183133036 183133035 183133151 116 TCTTTTCCCTTCCCTTTTTTCCTTTTCTTTTTCCTTCCCTCTTCCCTTACCTTTTTCCTTCCTTCTTCCCTTCCCTTTTTC-----CTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTT chr4 + 94230402 63697118 63697117 63697238 63697118 63697117 63697238 121 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT .:.x....::...:..::xx:x......:...::....::x...:::..::.:xx..:..x::.:xxx....:x.......-----...:.::.::::.............:......x.. 81M5I35M 72/116 62.1% 121/94230402 0.0% 5/116 4.3% 119435918 70778637 +3184 chr4 + 190214555 183133072 183133071 183133170 99 CCCTCTTC------CCTTACCTTTTTCCTTCCTTCTTCCCTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTT---TTTTTTTTTTGA chr4 + 94230402 61949700 61949699 61949807 61949700 61949699 61949807 108 CCCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTGA ....:...------.::...:x:.x.x..:.:...x.x.:::x:.:..x.:...:..xx.x:........................:...xx.---:....x:..... 8M6I79M3I12M 68/99 68.7% 108/94230402 0.0% 9/99 9.1% 121183372 69031183 +3257 chr4 + 190214555 183133079 183133078 183133185 107 CCCTTACCTTTTTCCTTCCTTCTTCCCTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTTTGACCAGGTCTTGCTCTG chr4 + 94230402 61949700 61949699 61949806 61949700 61949699 61949806 107 CCCTTTTCTTTGAACTCTACTGCTATGCTCCTTTCATACTCCATCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTAGTGGACTTTTACTTTG .....x:....xxx..::x:.x:.x:x:...:..:x.x..:.x:::..x......:.xx.x:.......:.......:............:::x::x.:..:..:.. 107M 65/107 60.7% 107/94230402 0.0% 0/107 0.0% 121183379 69031176 +3309 chr4 + 190214555 183133094 183133093 183133179 86 TTCCTTCTTCCCTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTTTGACCAGGTCTT chr4 + 94230402 72471342 72471341 72471425 72471342 72471341 72471425 84 TTATTTTTTCTCTTACAGATTTTCTTC--TGGGTTTCTTGTTTGTCTTCCTCCTTTTTCTTTTCTTTTTTTTCTTGGCTGCATCTT ..x:..:...:...x.xxx...:....--.xxx......x.:.x....:..::..........:........:...:.::x:.... 27M2D57M 59/84 70.2% 84/94230402 0.0% 2/84 2.4% 110661752 79552803 +3049 chr4 + 190214555 183133105 183133104 183133167 63 CTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTT chr4 + 94230402 58577650 58577649 58577712 58577650 58577649 58577712 63 CTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTT ...:::....:..:x:.x.x....:x...x...:.x.x..........:..........x... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 124555455 65659100 +3238 chr4 + 190214555 183143668 183143667 183143750 83 CATGGTGGTGTGAGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::x.--...:..:...........::........x:xx.x.:.x.:.....:.....:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 107110471 83104084 +3071 chr4 + 190214555 183153968 183153967 183154033 66 GCTCTTTTAACAGTGAATTGCTGGCTTTAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAACCCCA chr4 + 94230402 62290383 62290382 62290448 62290383 62290382 62290448 66 GCTAGTTTTACATGCTACTGCTAATTCTAAAAAACAAACAAAAAAAAAACAACAAAAAAAACCACA ...xx...x...xxxx.:....:::.:......:....x..........x..x..........x.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 120863585 69350970 +3047 chr4 + 190214555 183164353 183164352 183164408 56 TATACATATATATATTATATATACATATATATATTATATATACATATATATTATAT chr4 + 94230402 64381096 64381095 64381151 64381096 64381095 64381151 56 TGTGTATTTATACACTATAAATACATATATATCCTACATATAAGTACATATTGTAT .:.::..x....:.:....x............x:..:.....x:..:.....:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 118783257 71431298 +3121 chr4 + 190214555 183172538 183172537 183172613 76 GATGCTTTTATGTTTCTTGTTTTTTTTTTTTTTTTTTGTTATTGTTATTTGTTTGTTTCCTCTTTGTGACCTGATT chr4 + 94230402 77840973 77840972 77841046 77840973 77840972 77841046 74 GATCCACTTATGTTTGTGGTAGGTTTTTTCTTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGA--TGATT ...x.x:........x.x..xxx......:..........:.....:....x...x..:x.:..xx...--..... 69M2D5M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 105331565 84882990 +3714 chr4 + 190214555 183172550 183172549 183172645 96 TTTCTTGTTTTTTTTTTTTTTTTTTGTTATTGTTATTTGTTTGTTTCCTCTTTGTGACCTGATTCCTCTCTGAAGTTTTTGGGTTTTGTTTTTGCC chr4 + 94230402 76208459 76208458 76208549 76208459 76208458 76208549 91 TTTTCTTTCCCTGTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTGATCCATTCCCACTTACTTGTTC-----CTTTGTTTTTTCC ...::.x.:::.x.........x.....:.....:..............:...x...:.::x.:..x..:xxxx...:-----:.........x.. 78M5D13M 65/91 71.4% 91/94230402 0.0% 5/91 5.5% 106964091 83250464 +3251 chr4 + 190214555 183187742 183187741 183187815 74 GCATACCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::..x....:.:.:.........::........x.xx.x...x..........::.:..x:xx:..:..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 107154538 83060017 +3135 chr4 + 190214555 183189308 183189307 183189379 72 GCGCCTGCAATCCCAGCTACTCGAGAGGCTGAGGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x..:.:.:.........:..:........x.xx.x...x::........x:.:..x.xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 107156102 83058453 +3440 chr4 + 190214555 183224531 183224530 183224604 74 GAGTTGAGGTTTTTGTTTAGTTTTGTTTTTGTTTTTTGTTTATTTTTTGAGACGGAGTCTCGCTCTGTCACCCA chr4 + 94230402 12151626 12151625 12151696 12151626 12151625 12151696 71 GGGGTGGGTTTTTTGTTTTGGTTTGGTTTTGTTTTTTGTTTGTTTTTTGG---GGGTTTTTGTTCTGTTAGTCA .:.x..:.x.........x.x....x...............:.......:---..:x.:.:.:.....:.x:.. 50M3D21M 54/71 76.1% 71/94230402 0.0% 3/71 4.2% 171072905 19141650 +3299 chr4 + 190214555 183245232 183245231 183245305 74 AAAAAAAAAAAAAAAAAAGAGAGAGAAAGGAGGAGAAACTGCCTGAAAAGATGATTGCTGGTATATGACAGTCA chr4 + 94230402 44112716 44112715 44112789 44112716 44112715 44112789 74 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAATACACAGTCTTGGAAGACATTTCCAGGAGTCTGGTAATCA ..........................:..:.x:.x.x..x.:..x::....::x..x.x..x:.x..::.:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 139132516 51082039 +3020 chr4 + 190214555 183245233 183245232 183245282 50 AAAAAAAAAAAAAAAAAGAGAGAGAAAGGAGGAGAAACTGCCTGAAAAGA chr4 + 94230402 44890393 44890392 44890442 44890393 44890392 44890442 50 AAGGAAAAAAAAAAAAAGAGAGAGAGAGAAGGAGAAATACATCAAAAAGA ..::.....................:..:........:xxx:::...... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 138354840 51859715 +3356 chr4 + 190214555 183247597 183247596 183247682 86 TATATATGCTATATATACTATATATACTATATACTATATATACTATATATACTATATACTATATATACTATATATTATATGTACTA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATAT--TATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:.....:...:....--................x......x:xx...:..::xx...x.....x.x:x:...xx........x.. 16M2D68M 62/84 73.8% 84/94230402 0.0% 2/84 2.4% 156927336 33287219 +3295 chr4 + 190214555 183247606 183247605 183247685 80 TATATATACTATATATACTATATACTATATATACTATATATACTATATACTATATATACTATATATTATATGTACTATAT chr4 + 94230402 26320261 26320260 26320336 26320261 26320260 26320336 76 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATA----GTATATTTTTAGTATTGTAT .:.........:....xx.............:.x.....x..:...:..::xx...----:......x.xx...:.:... 56M4D20M 57/76 75.0% 76/94230402 0.0% 4/76 5.3% 156927345 33287210 +3655 chr4 + 190214555 183247615 183247614 183247698 84 TATATATACTATATACTATATATACTATATATACTATATACTATATATACTATATATTATATGTACTATATTCTATATACTATA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:.........:...:...............:.x.....x:xx...:..::xx...x.....x.x:x:....x.....::x... 84M 60/84 71.4% 84/94230402 0.0% 0/84 0.0% 156927354 33287201 +3425 chr4 + 190214555 183247631 183247630 183247714 84 TATATATACTATATATACTATATACTATATATACTATATATTATATGTACTATATTCTATATACTATATATACTATATGTACTA chr4 + 94230402 26320261 26320260 26320344 26320261 26320260 26320344 84 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTAATA .:.........:....xx.............:.x.....x.xx......::xx..xx.....x:.xx:...xx........x.. 84M 61/84 72.6% 84/94230402 0.0% 0/84 0.0% 156927370 33287185 +4942 chr4 + 190214555 183251870 183251869 183252010 141 TTTTCTCCTCCAGCCCTTATTTTATGTGCTTAATGAAGCTAATAATATCATGCTTATTTCGCATTTTGATGATTAATTTTCTAGTATGTTGAGACAGTTGTTTATGATTTTGTGGTTAAAGCTGAAGAATAGCTGATGTTA chr4 + 94230402 41318543 41318542 41318671 41318543 41318542 41318671 129 TTCTTCCTTCCAGTC--TGTTTTCTGCAATTAACAAAACTAATAATATCATACTTATTTTGCATCTCGGTTATTAATTTAC-AGTACATTGCGGCATCTAGTTATGA--------TAAAAGCT-AAGCGCAGTTAATATTA ..:.::.:.....:.--.:....x..::x....::..:.............:.......:....:.:.:.x........x.-....::...x.:..x:.:x......--------.x......-...x::..:.:..:... 15M2D64M1D25M8D8M1D17M 94/129 72.9% 129/94230402 0.0% 12/129 9.3% 141933327 48281228 +3129 chr4 + 190214555 183256885 183256884 183256929 45 CCCCCCCCCCCCCCCCCCCGGCTCTGTTCCTGCCCCCACAGGGCT chr4 + 94230402 1675374 1675373 1675418 1675374 1675373 1675418 45 CCCCCCTCCCCCCCCCCCCGGCTCCAATCCTCCTCCCAAAGGGTT ......:.................::x....x.:....x....:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 181581511 8633044 +3263 chr4 + 190214555 183328447 183328446 183328531 85 GGGAAAGAAAAGAGAAAAAAAAAAGTCCAAGTTCTTGCCCATTGGAGGAAAAAAAGAAAGCC--------AACCAGAGACTCT-------AAGGAAAAAA chr4 + 94230402 81537506 81537505 81537605 81537506 81537505 81537605 100 GAGAAAGAAAGGAGAAAAAAAAAAAATCAATTATTTGCCAAATAGAAAAAAAAGGAAAAGATATTATGGGAACCAGAACATCTTTAAGAGAGGGAAAAAA .:........:.............:x:...x.x:.....x.x.:..::.....:::....x:--------.......:xx...-------.:........ 62M8I13M7I10M 63/85 74.1% 100/94230402 0.0% 15/85 17.6% 101790941 88423614 +3268 chr4 + 190214555 183338678 183338677 183338760 83 CATGGTGGCGGGCGCCTGAAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.x:..--..x.:.:.........:..:........x.xx.x...x::...........:.:x.xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 107305481 82909074 +3097 chr4 + 190214555 183338803 183338802 183338860 58 AGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGTAAAGAAAATGACAA chr4 + 94230402 21774127 21774126 21774184 21774127 21774126 21774184 58 AGCAAATATTTGTATCAAAAAAAAAAAAAAAGGAGAAAAGACATAGTGAGAATCACAA ......xx.:...x.................::.:....:.x:..:x..:...x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 161564676 28649879 +3137 chr4 + 190214555 183349983 183349982 183350100 118 AGTTTAAATGCACTTGAACGGCT------CAGAGGAGGCCTGAATACTGCATTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTT chr4 + 94230402 69163296 69163295 69163418 69163296 69163295 69163418 123 AGTTCCAATGAACTGGAACTTCCTCATTCCACTGATGCTGTGAATAGTTGATTTCTTTTCTTATCTTTTC-TTTCTTTTTTCCCCTTCTGCTCCCACTCTCTGTTATTTCTTCTGTCTGTCTTT ....:x....x...x....xx.:------..xx.:x.x:x......x.xx............x.......-........:.:::...:.x:.::.x:.:::.x.:x......:.x.:.x.:... 23M6I41M1D53M 77/117 65.8% 123/94230402 0.0% 7/117 6.0% 114186687 76027868 +3485 chr4 + 190214555 183370011 183370010 183370091 81 CAGTGGTGCCCACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGTGGGAGGATTGCTTGAGCCCAGGAGGTCAAGGCTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTGC--ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........--..x......:.........::::.....:..x:xx.x.:.x::.....:.....:..x.:x:.....:.. 9M2D70M 56/79 70.9% 79/94230402 0.0% 2/79 2.5% 107336812 82877743 +3411 chr4 + 190214555 183394068 183394067 183394154 87 GACCTTGGGCAGGTCACTTACCCTCTCTGTGCCTCTGTTTCCTCACCTATGGATTGTCAATTAAAGTAG-TACCCCTCTCTTAGGGGT chr4 + 94230402 83501141 83501140 83501228 83501141 83501140 83501228 88 GACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAATTACCTACCTCACAGGGGT ...::......::.:.....x...x.x........x....:.:.....:.::.x..xx:x.x.x....:-....:x:...x:...... 69M1I18M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 99892927 90321628 +3020 chr4 + 190214555 183397457 183397456 183397493 37 TTTTGTTGTTGTTGTTGTTGTTGGGTTTTTTTTTTTT chr4 + 94230402 90203143 90203142 90203179 90203143 90203142 90203179 37 TTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTT ....x.................x.............. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 93194314 NA +3434 chr4 + 190214555 183401172 183401171 183401241 70 CACGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGATGCTGAGGCAGGAAAATCGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...:....:--....x......:...........::.x......x.xx.x:..x.:.........:.:.. 9M2D59M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 107367975 82846580 +3401 chr4 + 190214555 183407678 183407677 183407869 192 TTCGTTCTTCCTTTCTTTTCCTCTTG----------CTTTCTCTTTTTCTTTC-------------TTCTTGCTTTCTCTTTTTCTTTC--TTCCTTCTCTTTCTTGCTTTCTCTCTTTTTTCTTTC--TTCCTTCTTTCTTTCTTCTTTCTCCTCTTCCTTCTTTCCTTTCCTTCCTTCCTTTCTTTCTTTTCTTTCATTCTTTCCTTCCTTCCTTTC chr4 + 94230402 89682390 89682389 89682606 89682390 89682389 89682606 217 TCCCTTGCTGCTTTTTTTTCTCTTTGGGGGGAATCTTGTTCACCCTCTCTTTCAAGGGACTTGATTCTGTTGATTTATCTCTATTTTAAAGTTCCTTATCTCTCTAGCTTCTTTTGTTTCTGCTTTCAGATCCTTTCCTCTTTCT--TTCCTTCAGGGCCCTATTTCTCTTTGTTCTGTCTCTCATTTTCTGTGTCTGACATTTCTGCTCCCGCCTCTC .:.x..x:.x....:.....:::...----------:x...x.::.:......-------------:.x...x...x...:.x.:..xx--......x...:...x....::.:.x...:.x.....--x.....:::.......--..:..:.xxxx..:.x....::..:x...:x..::.:x...::.x.x.:.x.:x:..::x:...:x...:.. 26M10I17M13I23M2I36M2I16M2D72M 119/190 62.6% 217/94230402 0.0% 29/190 15.3% 93725288 NA +3212 chr4 + 190214555 183407708 183407707 183407806 99 CTCTTTTTCTTTCTTCTTGCTTTCTCTTTTTCTTTCTTCCTTCT--CTTTCTTGCTTTCTCTCTTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTCCTC chr4 + 94230402 79189061 79189060 79189159 79189061 79189060 79189159 99 CTGTTTTTTTTTCTGTTTGCTTTTTC--TTTCTATATTCATTCTAATTATCAGGCTTTTTATCCTCCTAATTATTGTCTTCATTTTTTCTACTTCTTCTTC ..x.....:.....x:.......:..--.....x.x...x....--:.x..xx.....:.x..:.::.xx..x:.x:....x..:.....x...::..:.. 26M2D16M2I55M 68/97 70.1% 99/94230402 0.0% 4/97 4.1% 104218647 85995908 +3613 chr4 + 190214555 183407871 183407870 183407991 121 TCTTTCTTTCTCTTTCTTCTTTCT---TCCTCTCCTTTTTTTCTTTCTTTTCTTCTTTCTCTTCTTCCTTCTTTCCCTTCCTTCCTCTCTCTCTTTCTCTTTCTTTCCTTCCTGCCTTTTTCCT chr4 + 94230402 75287122 75287121 75287244 75287122 75287121 75287244 123 TTTTTCTTCCCTTTCCTTTGCTCTCAGTCCTCTCATTTTAATGTGCTTATTCTATTTTGCCTTTTTCGTCTCCTTACTTCACCTCACTGTATTTTCATTTTTCTTTAATTCCT-CCTTTTTCCT .:......:.::..:...:x:...---.......x....xx.x.x::.x....x:...x:...:...x.::::.:x....x:::.x..x.x.:..:x.:.......xx.....-.......... 24M3I86M1D10M 79/120 65.8% 123/94230402 0.0% 4/120 3.3% 108120749 82093806 +3088 chr4 + 190214555 183407871 183407870 183407922 52 TCTTTCTTTCTCTTTCTTCTTTCTTCCTCTCCTTTTTTTCTTTCTTTTCTTC chr4 + 94230402 38772186 38772185 38772237 38772186 38772185 38772237 52 TCTTTTTTTCTCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCC .....:.......x....:...:....:.....:....:.:x..:.::..:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 144635685 45578870 +3223 chr4 + 190214555 183407883 183407882 183407933 51 TTTCTTCTTTCTTCCTCTCCTTTTTTTCTTTCTTTTCTTCTTTCTCTTCTT chr4 + 94230402 59557954 59557953 59558004 59557954 59557953 59558004 51 TTTCTCATTTCCTCCCCTCCCTTTTTTTTTTCTTTTCCGTTTTTTCTTTTT .....:x....:...:....:......:.........:x:...:....:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 123849929 66364626 +3319 chr4 + 190214555 183407984 183407983 183408057 74 TTTTTCCTTCCTTCCCTTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCATTTTTTTCTCTCCCTTTCTTTTCTTT chr4 + 94230402 60470376 60470375 60470449 60470376 60470375 60470449 74 TCTTTCCTGCCAGCCCTTTCCCTCTTTTCTCTTTCATTCAGCCTTTTAATTTTTTTTTACATTACCTCCTCTTT .:......x..xx........:..:.....:....x...xx:....:.x......:.:x.x:.x:..::..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 122937608 67276947 +3476 chr4 + 190214555 183411015 183411014 183411088 74 GTGCATGTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.....:.:.........::.:........x.xx.x...x.:........::.:.:x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 107377811 82836744 +3321 chr4 + 190214555 183412016 183412015 183412097 82 GTGGTGGCACGTGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAACCACTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----..:.:........:..::........x.xx.x...x..........::.:..x.xx:..:..:.. 6M1D6M4D65M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 107378815 82835740 +3080 chr4 + 190214555 183414759 183414758 183414810 52 ACACACACACACACACACACACACACACACATATATAATTATATATATGTAT chr4 + 94230402 89823929 89823928 89823980 89823929 89823928 89823980 52 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..x:.:.:.::x.:.................:x.....:........:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 93590830 NA +3183 chr4 + 190214555 183427186 183427185 183427228 43 TTTTTTTTTGGGGGGGGGGGCGGGGGGTGGGGGACGGAGTCTT chr4 + 94230402 54406339 54406338 54406381 54406339 54406338 54406381 43 TTTTTTTTTGGGGGGGGGGGAAGAGGGTGGGGAGCGGAGCttt ....................x:.:........::.....::.. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 129020847 61193708 +3441 chr4 + 190214555 183437069 183437068 183437142 74 GTGCACTTGTAATCCCAGCTACCAGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:........:x.::........x.xx.x...x::...........:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 107403865 82810690 +3024 chr4 + 190214555 183450610 183450609 183450667 58 TTCCTCCTTTTGTTTTTGTTTTGTTTTTTTGTTTGTTTTTTTTTTGAGACAGAGGGAG chr4 + 94230402 22701651 22701650 22701708 22701651 22701650 22701708 58 TTTCTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAGGTAAGAAAGGGGGAG ..:..x:.x.x......x........x..............xxx.:...x..:..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 160748959 29465596 +3031 chr4 + 190214555 183474592 183474591 183474657 66 GCCTAGGCAACCTAGTGGGACCCTATCTCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTT chr4 + 94230402 72575312 72575311 72575377 72575312 72575311 72575377 66 GTTTATGCACCCTAGTGGTATTTGAGTTCTATGAAAAAAACAAACAAACAAAAAAAAAAAACACCT .::..x...x........x.:::x.x:....::.......x...x...x............x:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 110899280 79315275 +3136 chr4 + 190214555 183476933 183476932 183476983 51 AAACAAAAGCAAAAACAAAAACAAAAGCAAACAAACAAACAAAAAAACCCA chr4 + 94230402 73193182 73193181 73193232 73193182 73193181 73193232 51 AAAAAATATCTAAAACAAAAACAAAACCAACCAACCAAACAAAAAAACCTA ...x..x.x.x...............x...x...x..............:. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 110283751 79930804 +3331 chr4 + 190214555 183477396 183477395 183477467 72 GCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:....:.........::::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 107444190 82770365 +3170 chr4 + 190214555 183478192 183478191 183478258 67 CCTCCTTCCTTCTCTCCCTCTTTTCCTTCTTTCCTTCCTTCCTTCCTTTCCTTCCTTCCTTCCCTCC chr4 + 94230402 25163654 25163653 25163718 25163654 25163653 25163718 65 CCCCCCACCCCCGCTCCCT--TTTCTTCCCGTCCGTCCTTCTTTCTTTTCTCTCCTTCCCTCTCCCC ..:..:x..::.x......--....:.:.:x...x......:...:....::.......:..:.:.. 19M2D46M 47/65 72.3% 65/94230402 0.0% 2/65 3.1% 158314538 31900017 +3352 chr4 + 190214555 183486971 183486970 183487042 72 GTGCCTGTAATTCCAGCTACTTGGAAGGATGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.............:....x....x.xx.x...x..........::.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 107453765 82760790 +3071 chr4 + 190214555 183496949 183496948 183496993 45 TATATATACACACACACACACATACACACATATATATATGCACAC chr4 + 94230402 46140857 46140856 46140901 46140857 46140856 46140901 45 TATATATACACACACTCTCACATACACACACGTGTATATACAGAC ...............x.x............::.:.....:..x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 137356092 52858463 +3336 chr4 + 190214555 183498154 183498153 183498227 74 GTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGTATTGCTTCAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:...........::........x.xx.x.x.x::...x.......:..x:xx:..:..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 107464950 82749605 +3230 chr4 + 190214555 183527489 183527488 183527549 61 AGAAGAAAGAAAAAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAGAGAAAG chr4 + 94230402 62475714 62475713 62475774 62475714 62475713 62475774 61 AAAAGGAAAAAAAAAGGGGGGGGAATGAGAGAAAGAGAGAGAAACAAAGGGGTGGGGAAAG .:...:..:.....::.:.:.:..:x:...............:.x....:.:x:.:..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 121051775 69162780 +3343 chr4 + 190214555 183527492 183527491 183527587 96 AGAAAGAAAAAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAAGG chr4 + 94230402 51148379 51148378 51148474 51148379 51148378 51148474 96 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGG ........:...xx.x.......:.....:.:...:.x...::xxx...:xx::..x.::.x.x:..::.x......:...:.::..:.::..:.. 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 132379113 57835442 +3303 chr4 + 190214555 183527512 183527511 183527608 97 AGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAAGGGGAAAAAGGAAAAAAAAAAGA chr4 + 94230402 51148379 51148378 51148475 51148379 51148378 51148475 97 AGAAAGAAGAAGCTACAGAGAGAGAGAGAGAAAGAAACAGAAGTTCAGAATCGAAATGGAACACGGAGGGTGAGAGAAAAAAAAGGAAAAGGAGGGA .......::...xx.x.......:.......:.....x...::xxx.:.:xx::.:x.:..x.x:...:.x..::.::.....:.:....::.::.. 97M 60/97 61.9% 97/94230402 0.0% 0/97 0.0% 132379133 57835422 +3706 chr4 + 190214555 183543308 183543307 183543379 72 GCACCTGTAGTCCCAGCTACTTGAAGGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTACAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.............:.......x.xx.x...x.:........::.:..x.xx:..:.::.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 107510102 82704453 +3322 chr4 + 190214555 183551162 183551161 183551206 45 AGTGAGACCAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGAGAGA chr4 + 94230402 75300447 75300446 75300491 75300447 75300446 75300491 45 AATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA .:..:.....................:..:...:...:.....:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 108250715 81963840 +3317 chr4 + 190214555 183568197 183568196 183568270 74 GTGCGCCTGTAGTCCCAGCTATGTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:.......:x..::........x.xx.x...x.:........::.:..x:xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 107534993 82679562 +3848 chr4 + 190214555 183577984 183577983 183578055 72 GCACGTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGTAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...........:...........:.........x.xxxx...x::...........:..x:xx:..:..:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 107544778 82669777 +3392 chr4 + 190214555 183594492 183594491 183594574 83 CATGGTGGTACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACAGCTTGAACACAGGAGATGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.....:..:.--.:..:.:...........::........x.xx.x...xx:.......x...:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 107561295 82653260 +3541 chr4 + 190214555 183604522 183604521 183604604 83 CGTGGTGGTGCTTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGAGGAATCCCTTGAACCCAGGAGGTGGAGACTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.......x:.--......:.:.........::........x.xx:x...x.x...........:..x.xx:.:...:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 107571325 82643230 +3693 chr4 + 190214555 183615563 183615562 183615630 68 CCCATTTCTTTCTTTGTTTCTTCTTTCTTTTCTTTCCTTTCCCTCCCTCCCCCTCTCTCTCTCTTTCT chr4 + 94230402 49829860 49829859 49829927 49829860 49829859 49829927 68 CCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTT ...............x...........:..:::.:..:::.........x.x.x.x.x..:.x...:. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 133785703 56428852 +3623 chr4 + 190214555 183617143 183617142 183617242 100 CCCTACTTTTTTTCTTTTATTTTTCTTTCTTTTTTTCCCCTCCCTCC----TTCCTCTTTCTTTTCCCTCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTT chr4 + 94230402 81341994 81341993 81342096 81341994 81341993 81342096 103 CCCACCCTCTTTACTTCTGCATTTCTGCCTATTTA-CCAATCTCTTCAAGACACCTCTACCTGTCCCCTCCCTTCCTCAATCCCTTCTTTCCTTCCTTATTTTT ...xx.:.:...x...:.::x.....x:..x...x-..xx..:..:.----:x.....x:..x.:.............xx.....:............x:.... 35M1D11M4I53M 71/99 71.7% 103/94230402 0.0% 5/99 5.1% 102275149 87939406 +3543 chr4 + 190214555 183617181 183617180 183617299 119 CCTCCCTCCTTCCTCTTTCTTTTCCCTCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTTCTTTCTCTTTCTTTTTGTTCCTTCCTTCTTCTCTTTTTCTTT--CTTTTCCTTCCTTCC chr4 + 94230402 92917621 92917620 92917741 92917621 92917620 92917741 121 CCATCCCCCTTTCTGCCTTTTTCCTCTCACTTCCTCCCCCCCCTCCCCTCTTCTCTGAGCATCTTCTCCTCCTGCTGGGTTCATTTCTCCATCTGTTCTCTGTCCACTTTCCCTCCCTGCC ..x:..:....:..x::.:...:.:...x.........:...::.::::....::.xxx:x....:::..:::x:.xx....x..:..:.x...x..:.::x.:--....:...:...x.. 104M2I15M 71/119 59.7% 121/94230402 0.0% 2/119 1.7% 90699560 NA +3033 chr4 + 190214555 183617226 183617225 183617282 57 TTTCCTTCCTTTCTTTTCTTTCTCTTTCTTTTTGTTCCTTCCTTCTTCTCTTTTTCT chr4 + 94230402 43923906 43923905 43923962 43923906 43923905 43923962 57 TTTTTTTCTTCTTTGTTCTTTATCATTATTATTCTTTCTTCTTTCTTCTCCTTTTCT ...::...:.:.:.x......x..x..x..x..x..:....:........:...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 139693320 50521235 +3275 chr4 + 190214555 183617226 183617225 183617298 73 TTTCCTTCCTTTCTTTTCTTTCTCTTTCTTTTTGTTCCTTCCTTCTTCTCTTTTTCTTTCTTTTCCTTCCTTC chr4 + 94230402 3394726 3394725 3394798 3394726 3394725 3394798 73 TTTCATTCATTTCTATTCTTTCTCTTTCATTGTTTTGATTCTTCTTTACTTTTTTGGTGCTTTTTCCTCTTTC ....x...x.....x.............x..x.x..xx...:.::..x::.....xx.x.....:.:..:... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 180222500 9992055 +3063 chr4 + 190214555 183617246 183617245 183617322 77 TCTCTTTCTTTTTGTTCCTTCCTTCTTCTCTTTTTCTTTCTTTTCCTTCCTTCCTTCCTCTCTCTC------TTTCTGTCTCC chr4 + 94230402 66394916 66394915 66394998 66394916 66394915 66394998 83 TCTCTTTCAATTTCTACCTTCCTTCATCCTCCTATCTCAGTTTTTCTCCCTTCCTCATTTTCTCTCAATCTTTTGCTGTGTCC ........xx...x.x.........x..::::.x...:xx....:..:.......:x:.:......------..x....x... 66M6I11M 56/77 72.7% 83/94230402 0.0% 6/77 7.8% 117222330 72992225 +3214 chr4 + 190214555 183625310 183625309 183625400 91 ACTGTATATATATATATATATATATATATATACATATATGTATGTATGTATAT--ATATACAC---------------------ACACACACAAGTTTAAAAACTGTCTGCAGA chr4 + 94230402 33416741 33416740 33416853 33416741 33416740 33416853 113 ACTGGATATACATATATATATATCTGTATACACATGTCTGCACGTATGTGCGCCAGTAAGCACTAAGATAGTTAATTCCACTCTACAAGCACAAG-CAAAAAACTGTTTGCAAA ....x.....:............x.:....:....:.x..:.:......::::--:..x:...---------------------...x:......-:x.........:....:. 53M2I8M21I11M1D18M 68/90 75.6% 113/94230402 0.0% 24/90 26.7% 150208569 40005986 +3707 chr4 + 190214555 183630537 183630536 183630619 83 CATGGTGGTGTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......:::.--....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 107597340 82617215 +3950 chr4 + 190214555 183643789 183643788 183643860 72 GCGCCTGTAATTCCAACTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.....:.......::........x.xx.x...x................x.xx:..:..:.. 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 107610583 82603972 +3354 chr4 + 190214555 183643915 183643914 183643963 49 TCTCAAAAACAAACGAACAAACAAAAACCACAAAAAAAACTTCTTTCAT chr4 + 94230402 81996041 81996040 81996089 81996041 81996040 81996089 49 TCTTAAAAACAAACAAACAAACAACAACAACAAAAAAACCTTATTCCAT ...:..........:.........x...x.........x...x..:... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 101647874 88566681 +3294 chr4 + 190214555 183669324 183669323 183669368 45 GTAGCACACTCAGGCAGCTTTTCTTTCCACTGAGGCTCATCCCAG chr4 + 94230402 41179773 41179772 41179817 41179773 41179772 41179817 45 GTGGCACATTCCGACTGCTTTTCTTTCCACTGTGGCTCATCCCAG ..:.....:..x.:.x................x............ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 142489551 47725004 +3605 chr4 + 190214555 183687042 183687041 183687123 82 GTGGTGGCACGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAGATGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-CACGTG----TAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-......----....:...........::........x.xx.x...x.........:.:.:..x.xx:..:..:.. 6M1D6M4D65M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% 107653841 82560714 +3103 chr4 + 190214555 183687283 183687282 183687346 64 TTCTCTGTGTGTGTGTGTATATATATATATATGTACACATATAGTATATATATACTTTTTTTTT chr4 + 94230402 33250998 33250997 33251061 33250998 33250997 33251061 64 TTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTT ..:.:...................:.:.....:..x.xx.x.x..x.:.x.x..:.x....... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 150436285 39778270 +3037 chr4 + 190214555 183688707 183688706 183688769 63 TTTGAGAATTTTATTTTAGTGTGTGTGCGTGTGTGTGTGTGTGTTTGTGTGTGTTTTGAGACA chr4 + 94230402 37981911 37981910 37981973 37981911 37981910 37981973 63 TTTGTTGAGTTTTTGTTGTTGTTTGTGTATGTGTGTGTGTGTGTTTGTCTTTGCTTTCAAACA ....xx:.x...x.x..:x...x....::...................x.x..:...x.:... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 145706796 44507759 +3274 chr4 + 190214555 183690074 183690073 183690145 72 GTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACCTGAGAGGCGGAGGTTGTAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......::..........::........x.x..x...x::........::::..x:xx:..:..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 107656868 82557687 +3732 chr4 + 190214555 183709646 183709645 183709704 59 GCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x..................::........x.xx.x...x::...........:.. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 107676440 82538115 +3342 chr4 + 190214555 183733793 183733792 183733862 70 CCTTTTCTGCTTCCTCTTTTCCCCCTTCCCCCTTTTTTCTTTCCTCTTTTCTC-CTTCCTCCTTCCCTCCT chr4 + 94230402 93982436 93982435 93982505 93982436 93982435 93982505 70 CTTTTACTGCTTTCACATTTCCCCCCCCCCCCCTTTTT-TTTCCTCTTCCCTTAACTTCTCCTTCCCTTTT .:...x......:.x.x........::.....:.....-.........::..:-x:.:..........::. 38M1D14M1I17M 53/69 76.8% 70/94230402 0.0% 2/69 2.9% 89751357 NA +3246 chr4 + 190214555 183744320 183744319 183744391 72 GCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGGGGATTGCTTGAGGCGGGGAGATTGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:::.........x.xx.x.:.x::.....:x.x:.:..x..x:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 107711114 82503441 +3273 chr4 + 190214555 183761704 183761703 183761747 44 ACAACAACAACAACAAAAAAAAAAAAAAAAAAGAAAGAAAAAAG chr4 + 94230402 92556592 92556591 92556635 92556592 92556591 92556635 44 ATGACAACAACAACAATTAAAGAAAAAAAAAAGAAAGAAAAAAG .::.............xx...:...................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 91205112 NA +3092 chr4 + 190214555 183761771 183761770 183761842 72 GCACCTAAAGTCTCAGCTACTTAGAAGGCTGAAGCTAGAGAATCTCTTGAGCCCAGGTGTTGGAAGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.:x...::.........::........:x.:x.x...x.x.....:.....:x.:.xx::....:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 107728565 82485990 +3215 chr4 + 190214555 183781722 183781721 183781782 61 TTTTATTTCTTTTCTGTTTTTTGTTGTTGTTGTTTGTTTTTGTTTTTGTTTTTGAGATGGA chr4 + 94230402 23298693 23298692 23298753 23298693 23298692 23298753 61 TTTTTTTACTTTTTTAGTTTTTGTTGTTGTTGTTTTGTTTTGTTCTCTTTTTAAAGTTGAA ....x..x.....:.:x..................xx.......:.:x....x:..x..:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 160483029 29731526 +3119 chr4 + 190214555 183781731 183781730 183781772 42 TTTTCTGTTTTTTGTTGTTGTTGTTTGTTTTTGTTTTTGTTT chr4 + 94230402 78106174 78106173 78106215 78106174 78106173 78106215 42 TTTACTGTTTTTTGTTGTTGTTGTTTGTTTTTATTTTACTTT ...x............................:....xx... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 105675557 84538998 +3546 chr4 + 190214555 183782515 183782514 183782583 69 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGAAGGTGGAGGTTG chr4 + 94230402 76033206 76033205 76033274 76033206 76033205 76033274 69 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..:.x....:.:...........::........x.xx.x...x.:.........:....x.xx:..:.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 107749309 82465246 +3568 chr4 + 190214555 183785105 183785104 183785168 64 GTAGTGTGCCTATAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:...::.x.:..:.:.........:..:........x.xx.x...x............::.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 107751904 82462651 +3575 chr4 + 190214555 183813254 183813253 183813325 72 GCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAAGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.............::........x.xx.x...x::.........:.:.:x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 107780048 82434507 +3067 chr4 + 190214555 183833853 183833852 183833911 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...xx:.x.......:.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 107800647 82413908 +3438 chr4 + 190214555 183860411 183860410 183860494 84 AAACAAAACAAAACAAACAAAAAA------CAAAAAACAAAAAAAAAAAAAAAAGAAGAAAAAGAAGAAAAAATTGGAGAATTGAGTTGA chr4 + 94230402 11407793 11407792 11407877 11407793 11407792 11407877 85 AAACAAAACAAAACAAACAAAAAACAGCCCCAAACCCCAAAAGCAAAACAAGAATAAGGAAGGAAAGTAA-----GGAGAGTGGGGCTGA ........................------....xxx.....:x....x..:..x...:..:::...x..-----.....:.x.:.:... 24M6I40M5D15M 62/79 78.5% 85/94230402 0.0% 11/79 13.9% 172452618 17761937 +3002 chr4 + 190214555 183860439 183860438 183860498 60 AAACAAAAAAAAAAAAAAAAGAAGAAAAAGAAGAAAAAATTGGAGAATTGAGTTGACACA chr4 + 94230402 93207379 93207378 93207438 93207379 93207378 93207438 60 AAACAAAAAAAAAAAAAAAAGGGTAGCAAAATAAAAAAATAAGTGAATTTAGTGGGAACA .....................::x.:x..:.x:.......x:.x.....x...x.:x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 90653060 NA +3210 chr4 + 190214555 183862153 183862152 183862205 53 TAAGTGTTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGAGTCT chr4 + 94230402 55777105 55777104 55777157 55777105 55777104 55777157 53 TAACTGTTTTTTGTTATTGTTGTTTTGTTTGTTTGTTTTTTAAGATAAGGCTT ...x.....x.....:.....xx..................:...:.::.::. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 128085048 62129507 +3471 chr4 + 190214555 183874922 183874921 183874983 62 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA chr4 + 94230402 1494994 1494993 1495055 1494994 1494993 1495055 62 TCAGGGAAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...:::...x.:.........x.:......x........:.:..:...:.....x....::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 182379928 7834627 +3068 chr4 + 190214555 183874926 183874925 183874981 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x.x......:.:..:...:.....x....::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 182379926 7834629 +3082 chr4 + 190214555 183874930 183874929 183875002 73 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAAAACTTAGA chr4 + 94230402 51472490 51472489 51472562 51472490 51472489 51472562 73 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAA ...x.x.x...::......:x.......:.......x.:.:.......:x..:.:....:x:x....x.x.:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 132402440 57812115 +3496 chr4 + 190214555 183874930 183874929 183874985 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x....::. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 182379930 7834625 +3074 chr4 + 190214555 183874934 183874933 183874994 61 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAA chr4 + 94230402 51472490 51472489 51472550 51472490 51472489 51472550 61 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGA ...x.x.x...::......:..x.....:.......x.:.:.......:x..:.:....:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 132402444 57812111 +3174 chr4 + 190214555 183874935 183874934 183874988 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:..........x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 98326515 91888040 +3388 chr4 + 190214555 183874937 183874936 183874990 54 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:x.....:...:.:.:.::...:..........x..... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 98326517 91888038 +3570 chr4 + 190214555 183874939 183874938 183875002 64 AAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATAAAACTTAGA chr4 + 94230402 85548420 85548419 85548483 85548420 85548419 85548483 64 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATATCAGACATGGA .............:.xx.....:...:.:.:.::...:..........x.....x.:..x.:.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 98326519 91888036 +3131 chr4 + 190214555 183874941 183874940 183874993 53 AAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATA chr4 + 94230402 85548420 85548419 85548472 85548420 85548419 85548472 53 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA .............x.xx.....:...:.:.:.::...:..........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 98326521 91888034 +3346 chr4 + 190214555 183890353 183890352 183890425 73 TGCACCTGTAGTCCCAGCTACCCTGGAGGCCGAGGCGGGAGAATTGCTTGAACCCGGGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:........::x::....:...x.xx.x...x::.........:.:..x.xx:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 107857148 82357407 +3584 chr4 + 190214555 183894010 183894009 183894081 72 GGCACGCTGGCGTGCACCTGTATTCCCAGCTACTTAGGAGGCTGAGGCACGAGGATCACTTGAGCCCAGAGG chr4 + 94230402 76033193 76033192 76033264 76033193 76033192 76033264 72 GATACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::..:.x.xx......x....x.:..........:::........x.x:.x.:.x.......:......:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 107860817 82353738 +3646 chr4 + 190214555 183931294 183931293 183931454 161 TGCGCCTGTAGTCTCAGCTACTTGGGTGGCTGAGGCGGGAGAATCGCTTGAACCCAGAATGTGGAGGTTGCAGTGAGCCAAGATTGTGCCACCGTACTCCAGCCTGGGCGACAGAGTAAGACTTCTTCCCCCAGCCTCCCCCCACCAAAAAAACTGTGGAG chr4 + 94230402 76033205 76033204 76033335 76033205 76033204 76033335 131 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA---------AGC---------------AGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAG ...:.x......::..........::x.......x.xx.x...x.:.............xx.xx:..:..:..------..x..x:.....---------...---------------...:x.x.x...:x.....x.:....x..x::x:....::... 73M6D12M9D3M15D43M 92/131 70.2% 131/94230402 0.0% 30/131 22.9% 107898089 82316466 +3240 chr4 + 190214555 183934163 183934162 183934245 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGGCTGAGTTAGGAGTATCGCTTGAACCCAGGAGGCGGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:........:..::........::xx.x.x.x.:...........:..x:xx:..:..... 9M2D72M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 107900966 82313589 +3399 chr4 + 190214555 183941428 183941427 183941510 83 CGTGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACACGGGAGGCAGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x::.--....:.:...........::........x.xx.x...x.........x.:.:..x:xx:.....:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 107908231 82306324 +3073 chr4 + 190214555 183943746 183943745 183943819 74 GTGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGAAGAATTGCTTGAATCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x......:........x:.::........x.xx:x...x::......:..:.:..x:xx:..:..:.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 107910542 82304013 +3483 chr4 + 190214555 183944574 183944573 183944656 83 CGTGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGCCAGGAGAATTGCTGGAGCCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:...........::..........xx.x...x::..x..:.....:..x:xx:..:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 107911377 82303178 +3078 chr4 + 190214555 183968343 183968342 183968411 69 TACACACACACACACACACACACACACACACACACACAAAGAAGAGCATAATTAAAGACAATTTTTTGA chr4 + 94230402 24017439 24017438 24017507 24017439 24017438 24017507 69 TAAATAAACATATACACACACACACACCCCTACACACTTAGAGGAGTACATCTATGAATAATGCTTTGA ..x.:.x...:.:..............x.x:......xx...:...:.:.x:..x::.:...x:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 159950904 30263651 +3033 chr4 + 190214555 183989162 183989161 183989213 52 TTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTTTGGTTTGGTTTGG chr4 + 94230402 33814289 33814288 33814340 33814289 33814288 33814340 52 TTTGTGGGGTTTTTTTTTTTTAGGTTTTTTTTGTTTGTTTGTTTTGTTTTGG ...x:x..x............xxx.................x....x..... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 150174873 40039682 +3056 chr4 + 190214555 183995248 183995247 183995328 81 AAAGTGAAAATGCCACTTATAAAGGACAGGGCTTTATTTTAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACA chr4 + 94230402 68265399 68265398 68265479 68265399 68265398 68265479 81 AATGAAAAAATGTTACTTAATATGCATAGAAATTAATTGTGGTTTATTTTTTTCTTTGTTTTGTTTTGTTTTTAATGCATA ..x.x:......::.....xx.x.x.:..::x..x...x.:..:.x.......:...x....x....x.....xx....:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 115729849 74484706 +3072 chr4 + 190214555 183995290 183995289 183995347 58 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACAAATAGAACCGAGATAAGAA chr4 + 94230402 88439658 88439657 88439713 88439658 88439657 88439713 56 TCTTTTCTTTTTCTTTTTTCTTTTTTTTATCTGTACACAAATAAAAAT--AATAAGAA ......:.....:......:........x.:.x.:........:..x:--:....... 48M2D8M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% 95555632 NA +3218 chr4 + 190214555 184006876 184006875 184006945 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.........:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 107973679 82240876 +3029 chr4 + 190214555 184007004 184007003 184007043 40 AGACTCTGTCTCAAAAAAAAAAAAAAAAACAAAACAAAAA chr4 + 94230402 39858775 39858774 39858814 39858775 39858774 39858814 40 AAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAA .::........x..............x............. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 144148229 46066326 +3022 chr4 + 190214555 184014085 184014084 184014148 64 ATTCACCGAGCAGCTAAGCCCCAACCAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAAGACCCC chr4 + 94230402 52807874 52807873 52807937 52807874 52807873 52807937 64 ATTCATCTAGCAGCTTACCAACCACCAGAAGAAAGAAAAAAAAAAAAAGCTGGGAAGAGATTTC .....:.x.......x.x.xx.x....:..:...:.............:x::.:..:...:::. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 131206211 59008344 +3207 chr4 + 190214555 184016363 184016362 184016407 45 AAAACAAAACAAAACAAAACAAAAACAAAAACAAAAAATCCAAAC chr4 + 94230402 18463585 18463584 18463629 18463585 18463584 18463629 45 AATAAAAAACAAAACAAAACACAGACAAAAACAAAAAAACCAAAC ..x.x................x.:..............x...... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 165552778 24661777 +3239 chr4 + 190214555 184017661 184017660 184017757 97 TGCCACAGAACT--GATCCTTGACACTTCCAAAAAAAAAAAAACAAAACAAAACAAAAAAAATTTAAAAAAAAAAAACAAAAAACAAAACTAAGCTACC chr4 + 94230402 56655908 56655907 56656002 56655908 56655907 56656002 95 TGTAACAAAACCCAGCTCCCCGATAT----AAAACAAAAAACACACAAAACAACAAAAAACATCTAGAAAATAACAACAAAACTTAAGAATAAACAACC ..:x...:...:--.x...::..:.:----....x......x...x..x.x.........x..:..:....x..x.......xx:..:.x...:.x... 12M2I12M4D69M 67/93 72.0% 95/94230402 0.0% 6/93 6.5% 127361753 62852802 +3074 chr4 + 190214555 184032423 184032422 184032475 53 TCTCTCTCCTTCTCTCCTTCTCTCTTTCTTTCTTTCCCCACTCCCTCCCTCCC chr4 + 94230402 23324179 23324178 23324231 23324179 23324178 23324231 53 TCTTTCTCTGCTTCTGCTTCTCTCTCTATTTCTTCCCCTGCTCCCTCCTACCC ...:....:x::...x.........:.x......:...::........:x... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 160708244 29506311 +3243 chr4 + 190214555 184046499 184046498 184046602 104 TTCTTTTTATCCTTTATTCAAAGGATTTTTTTAATTCTTTTTTATTTTTTATTTTTTTATTCTTTTATTCTTTTTTTATTCTTTTATTTGGTTATCCTTTGAGT chr4 + 94230402 66514129 66514128 66514232 66514129 66514128 66514232 104 TCCTCTCTACCTTTTAAACACTCCATGTTTCTATTTCCTTTTTATTTTCTGATGTTTTCTTCTCCCATTATCCTCACATTTTTTTATTCTTCCACCCCCTATGT .:..:.:..:.:....xx..xxxx..x...:..x...:..........:.:x.x....x....:::...x.::.:x:...:.......:xx::.:..::.:x.. 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% 117532370 72682185 +3104 chr4 + 190214555 184068698 184068697 184068733 36 AGACATATATGTATATATATACACACACACACGTAT chr4 + 94230402 41650594 41650593 41650629 41650594 41650593 41650629 36 AAACATATATATATATATATACACACACACACGTAT .:........:......................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 142418104 47796451 +3610 chr4 + 190214555 184083030 184083029 184083121 92 GTGCGCCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAACCGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....:.x....:...........::::........x.xx.x...x::...........:..x:xx:..:..:..------:.x...:..... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 108049826 82164729 +3276 chr4 + 190214555 184109071 184109070 184109153 83 CAGGGTGGTGGGCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCGGGAGGATCTCTTGAACCTGGAAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:......--...x....:.::..........::........x.xx.x.:.x.x........::....x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 108075874 82138681 +3340 chr4 + 190214555 184109197 184109196 184109268 72 GGAGACTCCATC---TCAAAAACAAAACAACAACAACAACAAAAAAAAACAAAACAAACAAACAAAAAGAACTAA chr4 + 94230402 73664701 73664700 73664775 73664701 73664700 73664775 75 GGGGTCTCTGTCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAAAAAACCCACAAAGATAAATGA ..:.x...::..---.:.x...x:.......:.................x....x....xx.....:.x..x.:. 12M3I60M 55/72 76.4% 75/94230402 0.0% 3/72 4.2% 110444496 79770059 +3289 chr4 + 190214555 184109207 184109206 184109260 54 TCTCAAAAACAAAACAACAACAACAACAAAAAAAAACAAAACAAACAAACAAAA chr4 + 94230402 69716314 69716313 69716367 69716314 69716313 69716367 54 TTTAAAAAAAAAAAAAACACCCTCAAAAAAAAAAAGCAAAACAAACAAACAAAA .:.x.....x....x....x.xx...x........:.................. 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 114392893 75821662 +3095 chr4 + 190214555 184109212 184109211 184109263 52 AAAACAAAACAACAACAACAACAAAAAAAAACAAAACAAACAAACAAAAAGA chr4 + 94230402 57454507 57454506 57454558 57454507 57454506 57454558 52 AAAGCAAAACAGCGACAACAACAAAAATCAACCAACCAACCAAACAAACAAA ...:.......:.:.............xx...x..x...x........x.:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 126654705 63559850 +3032 chr4 + 190214555 184113853 184113852 184113936 84 CTTTTTATCTCTCTCTCTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ......x.:.:::.x..::.x..:.:...:.:....:xx:.x:.x:..........:...::...x.....x..xx:.x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 126741827 63472728 +3110 chr4 + 190214555 184113860 184113859 184113973 114 TCTCTCTCTCTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTT-TTCTTTCTTTCTTTCTTTCTTTC-------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTT chr4 + 94230402 71957365 71957364 71957486 71957365 71957364 71957486 122 TCTTTGTCTTTTTCCCTTTCTGTGTTTGTCCCCTCCTTCTTCTTAATTCATTACTCCTTCTAGTCTTAACAGTTCCTTGACTTATTCCAGATTTTCTTTTTTTTCTCTCTCCTCTTTCTCTT ...:.x...:....:......x.x.::x...::..:.....-..xx...x..x:.:...::xx..-------..:...xx:..x..:.xxx:.......:...::.:::.:....:.:.... 41M1I23M7I50M 73/114 64.0% 122/94230402 0.0% 8/114 7.0% 112156495 78058060 +3024 chr4 + 190214555 184113861 184113860 184113944 84 CTCTCTCTCTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:.:...:..::.x.::..x.:::.:.:..::....xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 126741835 63472720 +3536 chr4 + 190214555 184113867 184113866 184113984 118 CTCTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ..:.x.::..:..:...:.xx.x:.....:.:....:::..x.....-.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.::::..........:...... 47M1I71M 73/118 61.9% 119/94230402 0.0% 1/118 0.8% 120416750 69797805 +3288 chr4 + 190214555 184113869 184113868 184113952 84 CTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ....:.....::..x...:.x:::..:....::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 126741843 63472712 +3035 chr4 + 190214555 184113889 184113888 184113972 84 CCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCT chr4 + 94230402 57372026 57372025 57372109 57372026 57372025 57372109 84 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:...::..:.:..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx..x..... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 126741863 63472692 +3017 chr4 + 190214555 184113906 184113905 184113978 73 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTT chr4 + 94230402 57372027 57372026 57372099 57372027 57372026 57372099 73 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:....:...x.....x.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 126741879 63472676 +3017 chr4 + 190214555 184113910 184113909 184113982 73 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTT chr4 + 94230402 57372027 57372026 57372099 57372027 57372026 57372099 73 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.............::...x.....x.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 126741883 63472672 +3370 chr4 + 190214555 184116733 184116732 184116793 61 CAAAAAAAGAAACAAACACACACACACAAAACAAAACAAAAAAACTACAAGGAAAAGACAG chr4 + 94230402 87234407 87234406 87234467 87234407 87234406 87234467 61 CAAAAGAAAAAAAAAACACACACACACAAAAAAGCCCACAACAACAACAAAAAGGAGACAG .....:..:...x..................x.:xx..x..x...x....::.::...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 96882326 93332229 +3001 chr4 + 190214555 184119300 184119299 184119352 53 CTTCTGTTTCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 60813645 60813644 60813697 60813645 60813644 60813697 53 CTTCTGTGTCTCAGTGTGTCCTTGTGTGTGTATGTGTGTGTCTGGGAATGCGT .......x...::......x:x.........:.........x..x.x:..:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 123305655 66908900 +3142 chr4 + 190214555 184127626 184127625 184127699 74 GTGTGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGTGGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x....x.:...........::........x.xx.x...x.x........::.x:.x.xx:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 108094422 82120133 +3159 chr4 + 190214555 184129252 184129251 184129364 113 AAAAATGCACTGACGTAGTACACAAACACCCCCCCAACATACACACACACACACACACACACACACACACACACACCAGAAACAAAATTTCACCAAATTATAGGCAATGTACA chr4 + 94230402 60987218 60987217 60987329 60987218 60987217 60987329 112 AGAATTCCACTAACATTTAGGACAAATGTCTGCCACAGATAGACAAATACATATACACACTCACACACATGCCCACAAAAAGCAAGACTAT-CAGAGCTATAGAAAAAATACA .:..x.x....:..:.xxx:x.....:::.:x..xx.x...x...x.:...:.:......x........::.x...x.:..:...:.:.x:-.x:.::.....:x..x:.... 91M1D21M 70/112 62.5% 112/94230402 0.0% 1/112 0.9% 123142034 67072521 +3096 chr4 + 190214555 184130418 184130417 184130487 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:.........:.::........x.xx.x...xx:.x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 108097221 82117334 +3359 chr4 + 190214555 184131113 184131112 184131294 182 TGTTTCAACTTGCTTCCACCAGCACTTACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---CTTTCTTTCTTTC-------------TTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 + 94230402 85792655 85792654 85792852 85792655 85792654 85792852 198 TGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCT ...:.:xx...:x..::xx..x..:..xx....x.::.xxx..x::..:..:......:.---...x..:.::x..-------------....x:.::....:...x.:..:..:..x.x:x.x.:....x.x:....:.:.:xxx.::x.:.:...x:.::x.:..x..xx.:......:...:.:.:....:.::. 60M3I13M13I109M 105/182 57.7% 198/94230402 0.0% 16/182 8.8% 98338458 91876097 +4093 chr4 + 190214555 184131170 184131169 184131340 171 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTCCTCTCTCTCTTTCTTCTTTCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGT---TCTTTCTGTTCTTTGTATTCATT-------TTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCT-CCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .....x...:x..x:::.:.......:....x.:.x::.x:.:..x.x..x.---.......x.:....x:x...x..-------...x.....:...:...:.:xxxx..:x...:..:x::...:.x:..-.....:.....:.......:x.:::.:x.x.x.::... 52M3D23M7D47M1D38M 102/160 63.8% 160/94230402 0.0% 11/160 6.9% 133954903 56259652 +3013 chr4 + 190214555 184131195 184131194 184131274 80 TTCTTTCTTCTTTCTTTCTTT----CTTTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTT chr4 + 94230402 14829160 14829159 14829243 14829160 14829159 14829243 84 TTCTTTCTTCTCTGTCTGTGTGGTACTTTTTTTTTTTTTTTTTCCTTTTTACTCCTTCCAGTTCCTCTTCTACTTTATTTATTT ...........:.x.:.x.x.----......:...:...:.........:x:..:...:xx:..:.::...x.:..x:..x:.. 21M4I59M 55/80 68.8% 84/94230402 0.0% 4/80 5.0% 169302035 20912520 +3117 chr4 + 190214555 184131195 184131194 184131311 117 TTCTTTCTTCTTTCTTTCTTTCTTTTTCT---TTCTTTCTTTCCTTTTCTTTCTT-----TCTTTCTCTTTCTCTTCCTTCCTTCCTT--CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT chr4 + 94230402 48874866 48874865 48874992 48874866 48874865 48874992 127 TTCTCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ....:.......:x:x.x.:.......x.---.::..x:.........x.:..:.-----.......:.x...x..x........::.--::...:..x::.:..xx:x.::x.x::..:....:.. 29M3I23M5I28M2I37M 77/117 65.8% 127/94230402 0.0% 10/117 8.5% 135256329 54958226 +3066 chr4 + 190214555 184131240 184131239 184131316 77 CTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTC chr4 + 94230402 66394905 66394904 66394981 66394905 66394904 66394981 77 CTTTCATTTAGTCTCTTTCAATTTCTACCTTCCTTCATCCTCCTATCTCAGTTTTTCTCCCTTCCTCATTTTCTCTC .....x..:xx........xx..:..x.........x.:.::::x.::.xx::..:..:.......:x:........ 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 117736335 72478220 +3105 chr4 + 190214555 184131805 184131804 184131878 74 ACACACACACACACACACACATATATATATATATAAAGAGGTATATTATGAGGAATTGGCTTCCACAATTATGG chr4 + 94230402 60300996 60300995 60301069 60300996 60300995 60301069 74 ACACGAACACACAAATACATATATATATATATATAGAAGGAGACATTTTTAGGAAACATCTGTCAAAGAGATGG ....:x.......x.:...:...............:.::.:x.:...x.x.....x::x..x:..x.:xx.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 123830809 66383746 +4330 chr4 + 190214555 184132777 184132776 184132870 94 ATATACATATATACACACATATATATACATATATACATATATACACACACACACACACA-----TATATATATATATATATATATAAAAT-------CTCCAATTG chr4 + 94230402 23247722 23247721 23247827 23247722 23247721 23247827 106 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAATAGCCTACCTCCAATTG ..:.:::...::........x...:x......:....:.:.............x:x.x.-----..:..:x...x..........:....-------......... 59M5I26M7I9M 73/94 77.7% 106/94230402 0.0% 12/94 12.8% 160885055 29329500 +3151 chr4 + 190214555 184132803 184132802 184132854 52 ACATATATACATATATACACACACACACACACATATATATATATATATATAT chr4 + 94230402 89823929 89823928 89823980 89823929 89823928 89823980 52 ACTTATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ..x......::x...:................x....xx........::... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 94308874 NA +3083 chr4 + 190214555 184132808 184132807 184132856 49 TATACATATATACACACACACACACACATATATATATATATATATATAT chr4 + 94230402 89823932 89823931 89823980 89823932 89823931 89823980 49 TATATATGGATACACACACACACACACACTTATAACTATATATACGTAT ....:..:x...................:x....xx........::... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 94308876 NA +3331 chr4 + 190214555 184157390 184157389 184157447 58 AAATAAATTCGTTCTTTCTCTTTCTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTT chr4 + 94230402 12818514 12818513 12818571 12818514 12818513 12818571 58 AAATAAATTCTCTCTCTCTTTTTCTTTTTCAATTTCTTTCCTCTTTTTGCTTATTTTT ..........x:...:...:.......:.:xx..........:..:..x...x:.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 171338876 18875679 +3115 chr4 + 190214555 184157410 184157409 184157525 116 TTTCTTTC--TTTCTTTCTTTCCTTTTCTTTCTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTT chr4 + 94230402 74372010 74372009 74372127 74372010 74372009 74372127 118 TTTTTTTCAGTATATTCCTTACTTAGTGTATCAATCTTTTCTTTCCTTCTATTTATTTCCTTCCCTTAATTCTCTGTATTCAAGATTCTCATTCCCTTTATTTTTCACTCTTTTCATT ...:....--.x.x..:...x.:.xx.x.x..xx...........::...x...x.........:..xx..:::.x:x...xxxx:::.:x..:...:.x...:..x:......:x.. 8M2I108M 74/116 63.8% 118/94230402 0.0% 2/116 1.7% 109785400 80429155 +3015 chr4 + 190214555 184157431 184157430 184157471 41 TTTTCTTTCTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTCC chr4 + 94230402 48177299 48177298 48177339 48177299 48177298 48177339 41 TTTTTTTCCTTTCTTTTCCTTCTCTCTATTCCTTCCCTTCC ....:..:..........:........x..:...:...... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 135980132 54234423 +3985 chr4 + 190214555 184157458 184157457 184157562 105 CTTTCTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTC--TCTTT--------CTTTTTCTTTCTT----TCTCTCTCTCCTTTCTTTCCTTTCTCTCTTTCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:.::........xx.x...:..:::...::::..x...:...x....--.....--------.:...x....:.:----...:.......::.....:......::....:. 54M2I5M8I13M4I33M 76/105 72.4% 119/94230402 0.0% 14/105 13.3% 120460341 69754214 +3428 chr4 + 190214555 184157487 184157486 184157609 123 TCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTTCTCTCTCTCCTTTCTTTCCTTTCTCTCTTTCTTTCCTTTCTTTCCTTTTTTTCCTTCCTTTCCTT-TCTTTCCTTCCTTT chr4 + 94230402 48874869 48874868 48874992 48874869 48874868 48874992 124 TCTCTTCTTCACATATCTCTTTTTGTGAGTCTTTATTTTCCTTTTATCTCCTACTTATCTTTCTTTATCTATTGCTTCCTTCTCTTGTTTTCTTTATCTTCTAATATTTATATCTCTTTCCCTT ..::...:.:x.x.x:........x.xxx.....x.:..:....:x::::..x...x::..:....x...x..x...:.:.:....x::..:...x:....:xx.x:..-.x.:..:....:.. 109M1I14M 76/123 61.8% 124/94230402 0.0% 1/123 0.8% 135282618 54931937 +3448 chr4 + 190214555 184158148 184158147 184158313 166 ATGGACAATAATATGGCACAGTGGTTAAGGGAACGAATCTTGGAGCCAGATTGCATAGGTTCAAGTATAAACTCTACTAATTACT-GTCTGCATGATCTTGGACAAGTAGCTTAGACTCTCTGAAGCCTCCATTGCCTCATCTGAGTAATGGGTATCGTAACAATTA chr4 + 94230402 13242401 13242400 13242548 13242401 13242400 13242548 148 ATGCACAGTGACAGAGCACAG--GACAAGACAGCAAGACTTGAGGTCTGTTCCCA---------------GCTCTGCCACTGACTCACCTG--TGACCTTGGGCAAGTCACGTAGCCTCTCTAATGCCTCAGTTTCCCCATCTGTAAAATAGGGATACTACTACTTA ...x...:.:.:.x:......--.x:...:x.:.:.:x....::.:.x.x.:x..---------------:....:.:.x.x...-::...--...:.....:.....x:.x...x......:.x.....x:..x..:......x:x...:..x..xx..x:.x... 21M2D32M15D15M1I5M2D74M 97/147 66.0% 148/94230402 0.0% 20/147 13.6% 170915747 19298808 +3310 chr4 + 190214555 184170299 184170298 184170372 74 GTGCACCTGTAGTACTAGCTGCTCAGGAGGCTGAGGCAGGAGAATCACTTGAGCCAGGGAGTTGAAGGTTGTGG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......x.:....:..::::........x.xx.x...x.......:..x:.:..:.xx:..:...:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 108137095 82077460 +3359 chr4 + 190214555 184219618 184219617 184219659 42 AGAAAAAGAAAAGAGAGAAGAAAGAGGAAAGGAAGGAAGAAA chr4 + 94230402 2216133 2216132 2216174 2216133 2216132 2216174 42 AGCAAAAGAAAAGAGAGAAGAAAAAGGAAAGAAAGGAAGGAA ..x....................:.......:.......:.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 182003485 8211070 +3377 chr4 + 190214555 184219620 184219619 184219792 173 AAAAAGAAAAGAGAGAAGAAAGAGGAAAGGAAGGAAGAAAGAAAGAAAAAGGAAAGAAAGAAAAGTAAACGAAGGAAGGGAGAAAGAGAAAGAAAGGGAAGGGAAGAAAAGGGAAGAAGGAAAGAGA--ACAGAAGGGAAGAGAA----GAAAGGAAGAAAAGGGAGGAAGGGAAGGAA chr4 + 94230402 49044653 49044652 49044820 49044653 49044652 49044820 168 AAAGATTAAAGAGAAAAGAATAAGAGATTAGGGGTGGTTAGAAAGACAA--GTAGTGAGAAGCACTAAGTGA--GAAAGGGAAGAGTTAAAGAAAG-------AAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAATGAGCAATAA ...:.xx.......:.....x:..::.xx:::..x:.xx.......x..--.x.:x:.::.:x.x...::..--...:..::.:..xx........-------......:.x...:..x......:.--.x....x.:.:x....----..:.xx.:...:.....::.x.:.x.:x.. 49M2D21M2D22M7D24M2I16M4I30M 105/162 64.8% 168/94230402 0.0% 17/162 10.5% 135174967 55039588 +3232 chr4 + 190214555 184219638 184219637 184219696 59 AAAGAGGAAAGGAAGGAAGAAAGAAAGAAAAAGGAAAGAAAGAAAAGTAAACGAAGGAA chr4 + 94230402 44664429 44664428 44664487 44664429 44664428 44664487 59 AAAAGGGGGGGGGAGGAATAAATAAATAAAGAGAAAAGAAAGAAAAAAAACCGGAGGAA ...::..:::..:.....x...x...x...:..:............:x..x..:..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 139555209 50659346 +3103 chr4 + 190214555 184219695 184219694 184219767 73 AAGGGAGAAAGAGAAAGAAAGGGAAGGGAAGAAAAGGGAAGAAGGAAAGAGAACAGAAGGGAAGAGAAGAAAG chr4 + 94230402 73744717 73744716 73744789 73744717 73744716 73744789 73 AAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ..:...:.....:.::.......:.::..::...:.....:.:..:::.:.x:x:.x....:x.::...x... 73M 46/73 63.0% 73/94230402 0.0% 0/73 0.0% 110474978 79739577 +3817 chr4 + 190214555 184219725 184219724 184219870 146 GAAAAGGGAAGAAGGAAAGAGAACAGAAGGGAAGAGAAGAAAGGAAGAAAAGGGAGGAAGGGAAGGAAAGGGGAGGGGAAG-GAAGGGGAGGAAAGGGAAGGGAGGGAAAGGAAGGGAAGGGAAAGGGAAAGGGGAAGGGAAGGAGG chr4 + 94230402 32265483 32265482 32265629 32265483 32265482 32265629 147 GATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGTGTGAGGGGGGGAGCCCGGGGAAGGAGAATGCACGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGG ..x.....::..x.x.::...x.::..::...:xxxxx.x:....:x:x:....:..:..xxx:..:....:..:x.x.x.-.x..x...:.:...::...:....::.:.::.....:..:.:.:.....:x::x..:...:x... 81M1I65M 85/146 58.2% 147/94230402 0.0% 1/146 0.7% 151954242 38260313 +3769 chr4 + 190214555 184219812 184219811 184219913 102 GAGGAAAGGGAAGGGAGGGAA-------AGGAAGGGAAGGGAAAGGGAAAGGGGAAGGGAAGGAGGAAAAAAAGAATAGAAGGGAAGAAGGGAAAGGAAGAGAAAAAGG chr4 + 94230402 2058570 2058569 2058675 2058570 2058569 2058675 106 GAGAAAGGAGAAGGGAGGGAATCTGTTCAGAGCAGCAAGCAAACAG---AGGAAAAGAATCAGAGGAAAAAAGCAGCAGAAGGGAGGTAGGGATAGAAAAAGCAAAAGG ...:..:.:............-------..::x:.x...x:..x:.---...::...::xx:..........:x.::........:.x.....x..:..:..x...... 21M7I18M3D60M 70/99 70.7% 106/94230402 0.0% 10/99 10.1% 182161242 8053313 +3035 chr4 + 190214555 184219836 184219835 184219913 78 AAGGGAAGGGAAAGGGAAAGGGGAAGGGAAGGAGGAAAAAAAGAATAGAAGGGAAGAAGGGAAAGGAAGAGAAAAAGG chr4 + 94230402 73744712 73744711 73744789 73744712 73744711 73744789 78 AAGCTAAAGGAAAAAGAAAGGGAAAGGGGAAAGAGAAAAGGGGAAAAGGGGGGGGGTGGGGCAGGGGTGGAAAGCAAG ...xx..:.....::.......:.....:.::::.....:::...x..::...::.x:...x.:..:x.::..:x.:. 78M 48/78 61.5% 78/94230402 0.0% 0/78 0.0% 110475124 79739431 +3839 chr4 + 190214555 184219908 184219907 184220112 205 AAAAGGGAAGAAAAGCGAAGAAGGGAAGGGAAGGGAAGGGGAGGGGAAGGGAAGGGAGGGAAAGGA-AGGGAAGGGAAAGGGTAA---GGGGAAGGGGAAGGGAAGGAGGAAAAAAGAATAGAAGGGAAGAAGGGAAAGGAAGAGAAGA-AGGGAAGAAAAGCGAAG---------AAGGGAAGGGAAGGGAAGGGAAGGGGAGGGGAAGGGAAGGGAG chr4 + 94230402 91771695 91771694 91771907 91771695 91771694 91771907 213 AAAATGGAAGAATAATGAAGACGGGAAGGTGCTGAGAGAAAATGCACAGGAACAGTAGGAACAGGAGAGAGCAGTCTGTGAGCAAATGGAGGAAAGAACAGATGAGGACAAGTAAAGAAT----GAGGAGAAAGCTGAAGAAGAAAATATAGGGGAAAAAAGGGAAAATACATTTTAAGAGTAAGAAA--AATGAGTAGAGGTGCTGAAGATAAGTGAG ....x.......x.::.....x.......x:xx.::..:::.x.x:x...:.x:.x...:.x....-..:.x..xxx:x.:.:..---.:....:.::x..:x:....x:.:x.......----.:.:....:.xx:.:.....:..x.-....:.:.....x...:---------...:.x.:.:..--:.x.:.x..:..x.xx....:x...x... 66M1I18M3I32M4D25M1I17M9I12M2D29M 126/199 63.3% 213/94230402 0.0% 20/199 10.1% 92448213 NA +3010 chr4 + 190214555 184220415 184220414 184220488 74 AGGGAGGGATGGGAAGAAGGGAAAGGGAGGGATGGGAAGAAGGGAAAGGGAGGGAAGGGAAGAAGAGAAGAGAA chr4 + 94230402 93677673 93677672 93677746 93677673 93677672 93677746 74 AAGGAAGGAGGTGAAGAGGTAAACCGAGGTGAAGGCAAGAAGGGACAGAGACAGGAGGAAACAAGAGCACAGAA .:...:...x.x.....:.x:..xx.::.x..x..x.........x..:..x:.:...:..x.....x.x.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 90542742 NA +3253 chr4 + 190214555 184229985 184229984 184230023 39 TCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 75248050 75248049 75248088 75248050 75248049 75248088 39 TTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa .::...................x................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 108981935 81232620 +3567 chr4 + 190214555 184229986 184229985 184230025 40 CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................................... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 108981937 81232618 +3102 chr4 + 190214555 184229988 184229987 184230023 36 CTCTCTCTCTCTCTCTCTCTCACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA ...................x.....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 171628684 18585871 +3353 chr4 + 190214555 184229988 184229987 184230027 40 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::.................x.................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 108981939 81232616 +3139 chr4 + 190214555 184229990 184229989 184230029 40 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACA chr4 + 94230402 75248049 75248048 75248088 75248049 75248048 75248088 40 CTTCCTCTCTCTCTCTCTCTCTCACACACACACACACACa ..::...............x.x.................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 108981941 81232614 +3316 chr4 + 190214555 184229990 184229989 184230025 36 CTCTCTCTCTCTCTCTCTCACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .........................:.......... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 171628686 18585869 +3102 chr4 + 190214555 184229992 184229991 184230027 36 CTCTCTCTCTCTCTCTCACACACACACACACACACA chr4 + 94230402 12601304 12601303 12601339 12601304 12601303 12601339 36 CTCTCTCTCTCTCTCTCTCACACACGCACACACACA .................x.......:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 171628688 18585867 +3704 chr4 + 190214555 184230999 184230998 184231070 72 GCACCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCTGGAGAACCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........x.::........x.:x.x...x.:...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 108197793 82016762 +3282 chr4 + 190214555 184267327 184267326 184267397 71 AGTACAAAAGAAAGCCACTGAGAGTGTGAGTGTGTGTGTATTCAGTATGTATATGTGTGTGTGTATGCACA chr4 + 94230402 51658566 51658565 51658630 51658566 51658565 51658630 65 AGAACAAGAGTGAGC------AAGTGTGTGTGTGTGTGTATACCATGTATACATGTGTGTATGTCTGCACA ..x....:..x:...------:......x............x.x:.:.:..:........:...x...... 15M6D50M 51/65 78.5% 65/94230402 0.0% 6/65 9.2% 132608761 57605794 +3074 chr4 + 190214555 184267371 184267370 184267434 64 GTATGTATATGTGTGTGTGTATGCACATGTATACATCTGTACACACATACACATGCACACAGTT chr4 + 94230402 68837087 68837086 68837146 68837087 68837086 68837146 60 GTAAGAACGTGTGCGTGTGTGTG----TGTACACACAAATACATACATACACATGCACACATTT ...x.x.::....:......:..----....:...:xx:....:.................x.. 23M4D37M 47/60 78.3% 60/94230402 0.0% 4/60 6.7% 115430284 74784271 +3028 chr4 + 190214555 184273878 184273877 184273947 70 CATTTCACAGATGAGGAAACTGACGCTTAGATAGGTTAAATGACTTGCCCCATGCCACAGAATTACTCAG chr4 + 94230402 82283127 82283126 82283196 82283127 82283126 82283196 70 CATTTCATACATGGGGAAACTGGGACACAGGCAGATTAAGTGACTAACCTAAGGTCACACAGTTAGTGAG .......:.x...:........:x:.x:..::..:....:.....x:..:x.x.:....x.:...x.x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 101990751 88223804 +8572 chr4 + 190214555 184316077 184316076 184316302 226 CCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTCCTTCTTGTTTCTCTTCCTCCTTTTCCTCTTCCTCTTCTTCTTCCTTTTTCTTCTTCCTTTCT------------CCATTTCCTTCCCTTTCCCCTTCCCCTTCCCCTC---CTTCTCCT----TCTCCTTCCCCTTCCCC----------TTCCCCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTGTTCATCTTCTTGTTTTT chr4 + 94230402 1114866 1114865 1115120 1114866 1114865 1115120 255 ctcccttcccttccatttcttccctcttctcccttccctttttcctttccctcttcctttctcgcttcccatttcccttctcttcccttTTCTCTTACTATGTTCGCTGGCCCTTTTCCTTCCCTTTCCCTTTCCAATTTCCCTTCAACATCTCCTTACATCTCCTTCCTTTTTCCCCTTACCATTTCTcctccctttctcattcccttccctctccctttccttttccctttccccttttcttttccttttttt .::...:.:.:...x::..:.:.:......:.:.::....:..x:..::.:..:......::.x.....:x..:::....::..::...:.::...x..------------..x................:....xx..:....:---.x......----.........::..:...----------:...:.:.:.....x...:.:.:.::..:.:.:.:...:...:.:.:.::x..:x.:...:.x..... 99M12I34M3I8M4I17M10I68M 152/226 67.3% 255/94230402 0.0% 29/226 12.8% 183201211 7013344 +3585 chr4 + 190214555 184321951 184321950 184322033 83 CGTGGTGGTGCACACCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGAGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.........:--.....::...........::........x.xx.x...x..:........:::..x:xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 108288754 81925801 +3242 chr4 + 190214555 184322085 184322084 184322144 60 GTCTAAA----AAAAAATTATATATATATATATATATATATATACACACACACACACACACACA chr4 + 94230402 4409058 4409057 4409121 4409058 4409057 4409121 64 GTCTAAAGCTAAAGAGATTGAGGCTGTACATATATATATATATACACACACAGAGACACACACA .......----..:.:...:x:xx.:..:.......................x.x......... 7M4I53M 49/60 81.7% 64/94230402 0.0% 4/60 6.7% 179913027 10301528 +3129 chr4 + 190214555 184322088 184322087 184322149 62 TAAAAAAAAATTATATATATATATATATATATATATACACACACACACACACACACACATAA chr4 + 94230402 74671061 74671060 74671122 74671061 74671060 74671122 62 TATACAAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAA ..x.x........xx.:................:.:...........x.x.x.x.:.xx... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 109651027 80563528 +3470 chr4 + 190214555 184322100 184322099 184322180 81 ATATATATATATATATATATATATACACACACACACACACACACACATAATATTTA-ATATGTCAACAAGATTTTTAGATTT chr4 + 94230402 50629533 50629532 50629614 50629533 50629532 50629614 82 ATATATACCTATATAAATATGTATACACACATGTAAATACACAAACATGGTGTTTATGAATGACCACTGCATTTTCAGCTTT .......:x......x....:..........:::.x.:.....x....::.:....-:x...x.x..x:x.....:..x... 56M1I25M 59/81 72.8% 82/94230402 0.0% 1/81 1.2% 133692567 56521988 +3475 chr4 + 190214555 184323105 184323104 184323183 79 GTGGTAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.::.x....:.:...........::........x.xx.x...x.:.........:.:..x.xx:..:..:.. 5M2D72M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 108289904 81924651 +3676 chr4 + 190214555 184323480 184323479 184323551 72 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCCGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........::::........x.xx.x...x.:...........:..x::x:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 108290274 81924281 +3106 chr4 + 190214555 184330928 184330927 184330985 58 AAATACCAGCCTCAATGCAAAAATAAGCTGGAATGGAGGAGGTTTTCCATGCTTTTTG chr4 + 94230402 9866854 9866853 9866911 9866854 9866853 9866911 58 AAATATCATCCTAAATGCAAATGTAGACTGGCATGGAGTAGATTCATCATGATTTTTG .....:..x...x........x:..::....x......x..:..:x:....x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 174464074 15750481 +3502 chr4 + 190214555 184339237 184339236 184339305 69 CATGGTGGTGCACACCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATCGTTTGAACCTGGGA chr4 + 94230402 76033197 76033196 76033263 76033197 76033196 76033263 67 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAA ..::.........:--......:.........:.:.........x.xx.x...x.::.......::.:. 14M2D53M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% 108306040 81908515 +3051 chr4 + 190214555 184372714 184372713 184372781 68 TGTGTATATATATATACATATATATATGTATATATATATATGTATATATATATACACGTATATACATA chr4 + 94230402 47135177 47135176 47135244 47135177 47135176 47135244 68 TGTGTATATGCATACACATGAATCAGTTTATGTACATGTATGTGTGTACACACACACGCACACTCCTA .........::...:....:x..xx:.x...:..:..:.....:.:..:.:.:.....:.:.:x.x.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 137237537 52977018 +3089 chr4 + 190214555 184372730 184372729 184372826 97 CATATATATATGTATATATATATATGTATATATATATACACGTATATACATAGGTATATATATGGGTATGTATATATGTATATACATAGGTATATAT chr4 + 94230402 91738199 91738198 91738295 91738199 91738198 91738295 97 CATATAGATATGTTTTCTTGTGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ......x......x.x:x.:.:x.xx.....x...::.:.:....xx.:.x..:x:.x..:.x:.:..::..:.x.x::........::........ 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 92634531 NA +3211 chr4 + 190214555 184372730 184372729 184372826 97 CATATATATATGTATATATATATATGTATATATATATACACGTATATACATAGGTATATATATGGGTATGTATATATGTATATACATAGGTATATAT chr4 + 94230402 91734601 91734600 91734697 91734601 91734600 91734697 97 CATATAGATATGTTTTCTTATGGAATTATATTTATGCATATGTATTAATAGAGAAGTCTACAGAGATACATACAGAAACATATACATGAGTATATAT ......x......x.x:x...:x.xx.....x...::.:.:....xx.:.x..:x:.x..:.x:.:..::..:.x.x::........::........ 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 92638129 NA +3369 chr4 + 190214555 184372812 184372811 184372893 82 TACATAGGTATATATATGTGTATATAT------ATACGTATATACATAGGTATATATAGGTATATATATAGGTATATATAGGTATATA chr4 + 94230402 81427530 81427529 81427617 81427530 81427529 81427617 88 TATATATGTATTTGCATGTGCAGAGCTTTTTCAATACGTATATACTTAGATATATTCATGCACATATTTATGTATTAATGGGTATATA ..:...x....x.::.....:.x.xx.------............x...:.....x:.x.:.:....x..x....xx..:........ 27M6I55M 61/82 74.4% 88/94230402 0.0% 6/82 7.3% 102945282 87269273 +3795 chr4 + 190214555 184373001 184373000 184373108 108 TATATAGGTGTATATATATAGGTCTATATATATACACCTATATATACACGTATATATACACCTATATATATACACGTATATATACACACCTATATATATGCACGTATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ....:.x....:.x.x.:.:..:x...x.....::..::.:......x...:..:x..:..x...:..:x:.::.x.x.:.:..:.:::x...:x.......:.:.:. 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 163263807 26950748 +3252 chr4 + 190214555 184373037 184373036 184373140 104 CCTATATATACACGTATATATACACCTATATATATACACGTATATATACACACCTATATATATGCACGTATATATACACCTATATATATGCACGTATATATACA chr4 + 94230402 21109192 21109191 21109295 21109192 21109191 21109295 104 CTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCA .:....:..::::..x.x.:.:x:.x...x.....::..x:.:......x.::x..:x....:.:.:...:x:..:.x:..:.:......::::.:x....:.. 104M 61/104 58.7% 104/94230402 0.0% 0/104 0.0% 163263845 26950710 +3358 chr4 + 190214555 184373093 184373092 184373202 110 TATATATGCACGTATATATACACCTATATATATGCACGTATATATACACCTATATATATGCACATATATATACACCTATATATATGCACGTATATATATACCTATATATG chr4 + 94230402 21109194 21109193 21109303 21109194 21109193 21109303 110 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACACG ....:...:::..x.x.:.:x:.x...x......:..x:.:......x.x.:..:x...:.::..:..:x:.::.:.x.:.:...::::....:x....:.x.::.:.:. 110M 64/110 58.2% 110/94230402 0.0% 0/110 0.0% 163263899 26950656 +3294 chr4 + 190214555 184373119 184373118 184373217 99 TATATATGCACGTATATATACACCTATATATATGCACATATATATAC------ACCTATATATATGCACGTATATATATACCTATATATGCACGTATATATATAC chr4 + 94230402 21109194 21109193 21109298 21109194 21109193 21109298 105 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGC ....:...:::..x.x.:.:x:.x...x......:..x:.:......------.......::....:..x:..::x.x.::x.....:..:.:.x....::..:. 47M6I52M 64/99 64.6% 105/94230402 0.0% 6/99 6.1% 163263925 26950630 +3744 chr4 + 190214555 184405104 184405103 184405186 83 CATGGTGGCGCATCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...--.x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 12M2D69M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 108371907 81842648 +3425 chr4 + 190214555 184426865 184426864 184426962 98 TACCTTGTTCCTCAAAACAGAATCT--------TACTTAACCTCTCTGTGCCTTGGTTTCCTTGTCTGTAAAATGGAA--AATATTAACTGTACCTACCCCATGGTGG chr4 + 94230402 83501122 83501121 83501227 83501122 83501121 83501227 106 TACCTGGATTCTGTACCCAGACTCTGGGCAAATTACTTAACCTGTATGTGCCTCAGTTTTCCCACCTGTAAAATGGAGCTGATAGTAAT--TACCTACCTCACAGGGG .....x.x.:..xx.xx....x...--------..........x.x.......::....:.::::............:--:...x...:--........:..::.x.. 25M8I45M2I9M2D17M 71/96 74.0% 106/94230402 0.0% 12/96 12.5% 100925743 89288812 +3051 chr4 + 190214555 184435941 184435940 184435993 53 TTATCTCTGGAGCTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTTTTTT chr4 + 94230402 7603983 7603982 7604035 7603983 7603982 7604035 53 TTGTCATTGGAGCTAACCTTTTTCCTCTTTCCTTTTCCCTTTCCTTTCTTTTT ..:..x:.......xx:......:..:....:.....::...:....:..... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 176831958 13382597 +3142 chr4 + 190214555 184441779 184441778 184441905 127 TTCACAGCATCCCAAGAACGTGGGT-ACTACTGTGGTCCCCATTTTATAGATGAAGAAACTGAGGCACGTAAGGTTAAGTAACTTCCCAAGGTCACAGAGCTACTGAGTGGTAGAACTCATATTTGAA chr4 + 94230402 74680346 74680345 74680473 74680346 74680345 74680473 128 TTTACAACACTCCTGTGAAGTAAATCAGCATTATTATCACCATATGATAGATAATGAAAGGCATACATGGCAGGTAAGGTGACTTACCAACATCATAGAGGAATTTTGTAGCAGAACACAAGCTTAAA ..:...:..::..x:x:.x..:::.-.x:.:.:.x:..x....x.x......:.x....xxx.x:..:.xx....x.:..:....x....x:...:....xx.:.xx..:.:.....x..x::..:.. 25M1I102M 77/127 60.6% 128/94230402 0.0% 1/127 0.8% 109761433 80453122 +3180 chr4 + 190214555 184452773 184452772 184452958 186 AAAAAAAAAAAAAAAAAAAAAAAGGGAAAGAAAGAAAGAAGAAATAGAGAGAGAAGAAA-AAAGCAAAT--AAACATG-----TAAAATATCTAGAATAGTGTTTTGCATCTTACATGCACTATGGGAGTATAAAATAGGTACAAAATTTCCAAACAG-------CAGCTTGGCCAAGGTATTAAAAATTTTAAAACTACA chr4 + 94230402 54037034 54037033 54037220 54037034 54037033 54037220 187 AAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAACTCCAATAATGCCCACTAAAGattttaaataaatattttaattct-------attattGGCATTT---ACAGGTAGAAAG----CATACAGTATGTTACAATTTTATCAAAATGTGAAAAATATGGATGTTACA .....:................:x.:.::xx:..:.:x..:.:............:.:.-:..:...x.--..xx...-----....:xx.:..:.xx.:.:....:xx...-------.:...x..x:.x.---.:.....x...:----..x....-------..::..x::...::.:.x......x.x:.x::.... 59M1I9M2I7M5I29M7D13M3D12M4D7M7I36M 115/172 66.9% 187/94230402 0.0% 29/172 16.9% 130415739 59798816 +3363 chr4 + 190214555 184455256 184455255 184455324 69 CCCTTCCCTCCCTCTCCCTCCCC---TCCCCCTCCCTTCCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 53757786 53757785 53757857 53757786 53757785 53757857 72 CTCTTCCATCTTTTTCACCTCTTAAATCCCCCCCCCCCCCCCCTCCTTTTTTTTCCTTTTTTTCTTTTTTTT .:.....x..::.:..x.::.::---......:...::..::..:...:.....::.......:........ 23M3I46M 49/69 71.0% 72/94230402 0.0% 3/69 4.3% 130697470 59517085 +3224 chr4 + 190214555 184469539 184469538 184469617 79 GTGGCACATGCCTGTTGTCCCAGCTACTCAGGAGACTGAGGCAGGAGGATCACTTGTGCCCAGGAGTTTGAGCCTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--...x..:.........::::..:.....x.xx.x.:.x......x:.....:..:..x:.x...... 10M2D67M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 108436338 81778217 +3436 chr4 + 190214555 184476129 184476128 184476207 79 GTGGCGCATGCCTCTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGCAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--.x..:.:...........::........x.xx.x...x::...........:..x:x::..:...:. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 108442928 81771627 +3257 chr4 + 190214555 184480493 184480492 184480566 74 GTGCACCTATAGTCCTAGCTACTTGAAAGGCTGAGGCAGGAGGTTCCCTTGAGACCAGGTGTTCAAGTCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x.:....:.:...................x.xx.x.:xx.x.....:x....:x.:.:x:.x...:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 108447289 81767266 +3030 chr4 + 190214555 184498266 184498265 184498328 63 TTTAGTGTTGGTGGGTTTGTGGGGTTTTTGTTGTTGTTGTTGTTGTTTGATTTTTTTTTTTTT chr4 + 94230402 10508112 10508111 10508174 10508112 10508111 10508174 63 TCTAGGGTTAGCTACTTTATGGTGGTTTTGTTGTTGTTGTTTTTGCTTTATTTTGTTTGATTT .:...x...:.:x:x...:...x.x................x...:..x.....x...xx... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 173990154 16224401 +3895 chr4 + 190214555 184498282 184498281 184498330 49 TTGTGGGGTTTTTGTTGTTGTTGTTGTTGTTTGATTTTTTTTTTTTTTG chr4 + 94230402 90203134 90203133 90203182 90203134 90203133 90203182 49 TTGAGAGGTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTG ...x.:.......x...................:............... 49M 45/49 91.8% 49/94230402 0.0% 0/49 0.0% 94295148 NA +3484 chr4 + 190214555 184507877 184507876 184507959 83 CGCGGTGGCTCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAATCCAGGAGTCAGAGGTTGAAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:....:x....--....:.:...........::........x.xx.x...x::......:....:..::xx:..:..x.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 108474680 81739875 +3950 chr4 + 190214555 184540936 184540935 184541015 80 AGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....--.....x......:...........::........x.xx.x...x...........:.:..x:xx:..:..:.. 5M2D73M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% 108507736 81706819 +3493 chr4 + 190214555 184550189 184550188 184550259 71 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGCAAGGGGAACCATTTGAGCCCAGGAGGTGGAGGTTGCA chr4 + 94230402 76033206 76033205 76033276 76033206 76033205 76033276 71 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ..:.x....:.:...........::.........xxx.x...x..:....:.....:..x.xx:..:..:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 108516983 81697572 +3014 chr4 + 190214555 184555413 184555412 184555474 62 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGATGAGTCTGAATACACTAA chr4 + 94230402 28185853 28185852 28185914 28185853 28185852 28185914 62 TCTCCAGAAAAAGACTGAAAAAAAAAGAAAAAGAAAAAAGCAGTTATGTTAGGAGATACTAA ....x.:.....:.xx:.........:.....:.......:..x.:x..:x.:.x.:..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 156369560 33844995 +3388 chr4 + 190214555 184557122 184557121 184557193 72 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGATGCAGGAGAATCGCCTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:...........::.......xx.xx.x...x.:.:.......:.:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 108523916 81690639 +11982 chr4 + 190214555 184559418 184559417 184559788 371 GGAAAAATA-AAAATCTCTAAGTTGTCCAAATATTTCATCCGCTTTTCCAATTTGTTCTTTGTTTTCTAAGTAAACAGGAGCATTGAAATAAGACACCTTATTTTCATCTGCCGTACGTTTACAAACTATGTCATCTTCACAGGGATGCAGGAACTCTCCT-------------------AACAAGA-------------------------------------------CTGCACGT------------------TCTGGAGGTCCTTGGCCTTG---GCCTTTGTCAAAGCCTCCGTGGCCACCCCCTCATCCAAATCCTCCCCTGTCGCCACCTCTGATATTTCCACCGCCTGCACCTCAGAAGCGGTTGCTGCTGCTGCCGCGGTTGAAACCGCCACCT---------CCACCACCTCGATCAAAGCCTCCACGACCTCCGCCCGGAAGAGACATTCTCT chr4 + 94230402 59692273 59692272 59692721 59692273 59692272 59692721 449 GGAAGGATACAAAGTCTCGTAGCTGCCCAAAGATTTCATCCACTTTGCCAATCTGTTCCTTATTATCCAAGTATACTGGTGCGTTGAAATAAGGCACTTTGTTTTCTTCTGTTTTACATTTACAAACGAGATCATCTTCACACGGATGCATGAACTCCCCCAGTACTGAAATAAAGAACAAACAAGCTGCAGATCTTCAACACTCACTGCAAGTTAAGTAAATACAGCCTCTGCACGTAACTTACAAACTACCCTCTCCGGAGGGCCCTGGTCATATCCGCCTCTGTTGAAGCCTCCTCGTCCACCTCCCCGTCCAAAGCCACCTCGTCCACCACGATTAAAG---CCGCCTCTGTCACC------------GCCACCTCCTCCACGATTAAAGCCGcctcctcctcttccgccacctcctcgtcctccgccaccacctcctcttccACGAAAGGACATTCTCT ....::...-...:....xx..:..:.....x.........:....x.....:.....:..:..x..:.....x..x..x..:..........:...:..:.....x....::x...:.........x.x:...........x.......x......:..:-------------------......x-------------------------------------------........------------------..:.....x..:...:.x.:---....:...::........x:.x.....:..:.:......x..x..:.xx:.:....xx:.:.x:---..:..x.:xx....------------..::.:x.:x..:..:..:..:.....x...---------.....x.....x:.xxx...x....xx....:x..xx...::.......... 9M1I151M19I7M43I8M18I20M3I64M3D14M12D31M9I52M 262/356 73.6% 449/94230402 0.0% 108/356 30.3% 124867145 65347410 +3404 chr4 + 190214555 184564966 184564965 184565057 92 GCGCACCTGTAGTCCCAGCTACTCCGAAGGCTGAGGCAGGAGAATTGTTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:....x......:.........:x:.........x.xx.x...x:::........:.:..x:xx:..:..:..------..x..x...... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 108531762 81682793 +3726 chr4 + 190214555 184572669 184572668 184572751 83 CATGGTGGCGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGCAGCATCTCTTGAGCCTAGAAGTTTGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:....:--......:...........::........x:xxxx.x.x.x.....:..:.....:..x:.....:.. 14M2D67M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 108539472 81675083 +3322 chr4 + 190214555 184573577 184573576 184573652 76 TGGGGCGTGGTGGCACACGCCTCTAATCTCAGCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAACCCAGAGGC chr4 + 94230402 76033192 76033191 76033265 76033192 76033191 76033265 74 TGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGC ..:x:.:::....::....--.x..:.::..........::........x.x:.x...x::............:.. 19M2D55M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% 108540385 81674170 +3594 chr4 + 190214555 184584859 184584858 184584935 77 TGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGGATCACTTGAGCCTGGGAGATTGAGGCTGCA chr4 + 94230402 76033202 76033201 76033276 76033202 76033201 76033276 75 TGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ...::..:.--......:...........::........x.xx.x.:.x.......:..::.:..x..x:.....:. 9M2D66M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 108551657 81662898 +3310 chr4 + 190214555 184589940 184589939 184590151 212 TCAGGAAGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAAGTTGCAGTGAACTGAGATCATGCCACTACCCTCTAGCCTGGGCAACAGAGCAAGATTCCGTTTCAAAAAAAAAAAATAGCCAAGGGTGGTGGCATGCACCTGTAGTTCCAGCTATTCAGGAGGCTGAGGCAGGAAGATCGCCTGAGTCTGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033094 76033093 76033277 76033094 76033093 76033277 184 TTGGGAACCTGATTTGAGGAAGTAGACTGAAAGAGGAGGGCAGAAG--GCAGTAAA----GATTAGGGA-------CCTGGTTTGGGAAAGTATGTAA-------TGTCATGAAAGGATGATACACAGTGGTG--------CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::....x....xx:::.::.:.x.x:....xxx:.::........--.....:..----...:.x.xx-------:..:.::....x..xx:x.:..-------.x...x:...::.x:...xx..:x....--------...x..............:.::::........x.xx.x::.x.:.:...::.::.:..x..x:.....:.. 46M2D8M4D9M7D22M7D28M8D71M 114/184 62.0% 184/94230402 0.0% 28/184 15.2% 108556846 81657709 +3112 chr4 + 190214555 184604226 184604225 184604307 82 GTGGTGCCACATGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGC-----ACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----:.x....:.:...........::...:....x:xx.x...x::...........:..x:xx:..:..:.. 7M5D70M 54/77 70.1% 77/94230402 0.0% 5/77 6.5% 108571025 81643530 +3194 chr4 + 190214555 184645737 184645736 184645819 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGGATTACTTGAGCATAGGAATTGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:.........::::........x.xx.x.:.x:......:.x:..:.::.xx:.....:.. 14M2D67M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 108612540 81602015 +3919 chr4 + 190214555 184651153 184651152 184651233 81 CAGTGGTGGGCACCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033199 76033198 76033277 76033199 76033198 76033277 79 CAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........--...x....:.:............:........x.xx.x...x.:.........:.:..x:xx:..:..:.. 8M2D71M 60/79 75.9% 79/94230402 0.0% 2/79 2.5% 108617954 81596601 +3295 chr4 + 190214555 184652911 184652910 184653030 120 GGAGGGAAGGGAGAAAG-GAAGG----AAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAAGAAGAGGGAGGGAGGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAAGAA chr4 + 94230402 14807826 14807825 14807944 14807826 14807825 14807944 119 GGAGAGAAAAGAGAGAGTGAAAGCCTCAAATAACAATGGCA------AAGGAGAAACTAGAATGAAGGTGGAAAAAGCTGGAAGACAAGAATGTTGGGAAGGAAAAATGGAAAGGAGGGAAAAAA ....:...::....:..-...:.----..:x..x..x..x.------.....:.:.xx:...x....:x...:::..xx:.:.::x...:.x.xx.........::.x......:.......:.. 17M1I5M4I14M6D78M 77/114 67.5% 119/94230402 0.0% 11/114 9.6% 169845085 20369470 +3130 chr4 + 190214555 184652983 184652982 184653032 50 GAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAAGAAGA chr4 + 94230402 41164204 41164203 41164253 41164204 41164203 41164253 50 GAAGAGAGGAAGGGTGAAGGGGAGGAGGGAAGGGTAGTGGGGGAAGAAGA ....::.......:x......:....:......:x..x:...:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 143488779 46725776 +4392 chr4 + 190214555 184653031 184653030 184653165 135 GAGGGAGGGAGGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAGGAAGGAGGGA-------------AAGAAGAAGGAAGGAAGGAAGGTAGGTAGGTGAGAAAGAAAGAAACTGAGAGAACTAGGCTAGGAAGAA chr4 + 94230402 1500700 1500699 1500842 1500700 1500699 1500842 143 GGGGAAGAGAAGAAAGGTGGGGGGAAGAAGTGAGGGGAAGGAGGAAAAAAACAGGAAAAGGAGAAATAGGGGGTGATATGAGGGGAATaaaggaaggaaaatgg--aaaaaaaaaagaaagaaaatg---gaaatagaagaggaaaaa .:..:..:..:...:.:x..::........x..:..:.:.:......:..:x:::::......::.-------------:..::...x:..........::.:.--.::x:.:...........x..---...x...:xx.....:.. 66M13I25M2D21M3D18M 87/130 66.9% 143/94230402 0.0% 18/130 13.8% 183152331 7062224 +3362 chr4 + 190214555 184658768 184658767 184658850 83 CGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTAAACCTGGGAGACAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--...x....:.:...........::........x.xx.x...x.:...:....::.:..x:xx:..:..:.. 10M2D71M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 108625571 81588984 +3503 chr4 + 190214555 184667690 184667689 184667762 73 TTTATCTCCTAGCACGCAAG---------TCCCTCCCCCAGTTCCTCATTGGCTGAGTACTATGGGGTTAACAATCTTTCCA chr4 + 94230402 20895675 20895674 20895756 20895675 20895674 20895756 82 TTTATGCCCTATTACCCAATACGTATCTTTTCCTTCCCTGGTTCCTCATTGGCTGAGTACTTCAGGTTCAAAAATCTTCCCA .....x:....x:..x...x---------.:...:...::.....................x::..x.:..x......:... 20M9I53M 56/73 76.7% 82/94230402 0.0% 9/73 12.3% 163772015 26442540 +3201 chr4 + 190214555 184676301 184676300 184676371 71 CCTGCCTTCCCCTCCCTTCCCTTTCCTTCCCTTCCCTTCCTTTCTCCTTTTCCTTCCCTTCTCCTTTCCCT chr4 + 94230402 83645378 83645377 83645448 83645378 83645377 83645448 71 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCT ...:.:::.:..::.....x:...:.::..:....:........::x:.::xx............x::... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 101030923 89183632 +3317 chr4 + 190214555 184676320 184676319 184676472 153 CCTTTCCTTCCCTTCCCTTCCTTTCTC--CTTTTCCT------TCCCTTCTCCTTTC------CCTTCCCTTCCCTTCCTTTCCCTTCCCTT----CCCCCTTCCCTTCTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCCCTCCCTCTCTCTCCTTTC chr4 + 94230402 708439 708438 708609 708439 708438 708609 171 CTTTTCTGTCACATTTCATCCTTTTTCTGCTGTTTCTGGTTGTTACTTTCTTCCTTCAAGATGCTTGCTCTTCCAGACTTAGCCCGTCACCCAGGACTGTGTTTTACCCTCCCTGCCTTCCCTCCTCCCCTCTCCCCATCTGCCTTTCCCCATCTGCCTTTCCATCCTCTC .:....:x..x.x.::.x......:..--..x..:..------.x.:....:.:...------.:.x.:.....xxx.:.xx...x..x.::----.:x:x..::x::......x..:.:.::...:...:..:...x...x....:..::x:..x...:..:x....:.. 27M2I8M6I14M6I29M4I75M 96/153 62.7% 171/94230402 0.0% 18/153 11.8% 183967881 6246674 +3183 chr4 + 190214555 184676373 184676372 184676479 107 CCCTTCCCTTCCTTTCCCTTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCCCTCC----CTCTCTCTCCTTT--CCCTTCCT chr4 + 94230402 55189100 55189099 55189212 55189100 55189099 55189212 113 CCCTCCCCTTCCCTTCTGTTCCCTTCTCTCTTCCACCACCACCTATTATTTGCCTTACTTTTCTCCTTCTCTGGTCCCACCACTGCAGAGCGCTCTCCCATTCAGCCCCTCTT ....:.......:...:x........:.:.....x::x:.x.:.x::x.:.x....x.:::.::.......:xx....x:.x..x.----.x.....:.x..:--...:..:. 86M4I13M2I8M 69/107 64.5% 113/94230402 0.0% 6/107 5.6% 129487273 60727282 +3146 chr4 + 190214555 184676549 184676548 184676598 50 CCTTCCCCTTTCCTTTTCTCTCCCTTCCTTCTCCCTTCCTTCCCCTTCCT chr4 + 94230402 82545444 82545443 82545493 82545444 82545443 82545493 50 CCTTCCCCCTTCCTTTCCTCTCACCTCCTCCTCCCTTTCCTCATCCTGCT ........:.......:.....x.:....:.......:.:..x:.:.x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 102131105 88083450 +3036 chr4 + 190214555 184676550 184676549 184676623 74 CTTCCCCTTTCCTTTTCTCTCCCTTCCTTCTCCCTTCCTTCCCCTTCCTTCTTTTTCCCTTCCTTTCTCCCCTT chr4 + 94230402 57372026 57372025 57372099 57372026 57372025 57372099 74 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ...:::....:...x..:..x:.:............:xx::x.:x.::......:..:..:....x..::.x.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 127304524 62910031 +3012 chr4 + 190214555 184676596 184676595 184676647 52 CCTTCTTTTTCCCTTCCTTTCTCCCCTTCCTTCCCCTCCCCTTCCCCCTCCC chr4 + 94230402 89205929 89205928 89205980 89205929 89205928 89205980 52 CCTTTTTCTTCCCTTCCTTTTTCCCCTCCCTACCCAGCCTTTCCTCCCACTC ....:..:............:......:...x...xx..::.:.:...x.:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 95470667 NA +3272 chr4 + 190214555 184676705 184676704 184676771 67 CTTTCTCCTTCCCTTCCCTTTCCTTCCCCCTTCCCTTCCCTTTCCTTCCCC-CTTCCCTTCCCTTTCT chr4 + 94230402 83645378 83645377 83645445 83645378 83645377 83645445 68 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACT .:.x....:.....:.:::x.::.........:....:........x.:..-x........:.:.x.. 51M1I16M 49/67 73.1% 68/94230402 0.0% 1/67 1.5% 101031327 89183228 +3340 chr4 + 190214555 184676727 184676726 184676798 72 CTTCCCCCTTCCCTTCCCTTTCCTTCCCCCTTCCCTTCCCTTTCTTTCTCCCTTCCCTTCCCCCTTCCCTTC chr4 + 94230402 83645378 83645377 83645449 83645378 83645377 83645449 72 CCTACTCCCTCCCTCCTTCATTTTTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTC .:.x.:..:.....:.:::x.::.........:....:......:.x....xx.:..:.:.:...x.:.:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 101031349 89183206 +3150 chr4 + 190214555 184676729 184676728 184676783 55 TCCCCCTTCCCTTCCCTTTCCTTCCCCCTTCCCTTCCCTTTCTTTCTCCCTTCCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ...:::..:::....:...:.......:::.........x...:.:.:....:.. 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 110246048 79968507 +3779 chr4 + 190214555 184676752 184676751 184676976 225 CCCCCTTCCCTTCCCTTTCTTTCTCCCTTCCCTTCCCCCTTCCCTTCCCT------TCCCCCTTCCCTTCCCTTTTCCCTTCCCTTCCCCCTTTCCTACCCCATTCTTTTCCCTTCCC--------------TTCCCTTCCCCCTTC------CCTTCTCCTCC---------CCCTTCCCCTCTCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTCCTCT chr4 + 94230402 708349 708348 708608 708349 708348 708608 260 CCCATTTCTCCTGATCGACATTGCTCCTTCTCTCCCCCATTGCAGCCCTTGGATGCTTATTTTTAGCTCCCGTTATTTCCCTCAGGCCAACTTTTCTGTCACATTTCATCCTTTTTCTGCTGTTTCTGGTTGTTACTTTCTTCCTTCAAGATGCTTGCTCTTCCAGACTTAGCCCGTCACCCAGGACTGTGTTTTACCCTCCCTGCCTTCCCTCCTCCCCTCTCCCCATCTGCCTTTCCCCATCTGCCTTTCCATCCTCT ...x:...:.:.xx::xx.x..x::.....:..:....x..x.xx:..:.------.:x:::..xx..:..x..x.::.:::.xxx..xx....:..::.x....::x.:.::..:.:--------------..x.:...::.....------.:.x...:...---------..x.:x...xxxx:.x:x::..x...:::.:x.......:.:.....::.....x...x....:....x..:x....:..x...... 50M6I62M14I15M6I11M9I87M 133/225 59.1% 260/94230402 0.0% 35/225 15.6% 183968403 6246152 +3218 chr4 + 190214555 184676775 184676774 184676828 54 TCCCTTCCCTTCCCCCTTCCCTTCCCTTCCCCCTTCCCT-TCCCTTTTCCCTTCC chr4 + 94230402 74430681 74430680 74430735 74430681 74430680 74430735 55 TCCTTTTTTTTTTCCTTTTTCTTCCCCTCCCCCTTCCCTGTCTCTTTTCCTTTCC ...:..:::..::..:..::......:............-..:.......:.... 39M1I15M 42/54 77.8% 55/94230402 0.0% 1/54 1.9% 110246094 79968461 +3208 chr4 + 190214555 184676941 184676940 184677039 99 CCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTCCCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTC chr4 + 94230402 92978666 92978665 92978764 92978666 92978665 92978764 99 CCTCTCCCTCTACTGCTGTCTTCCTTCCCTTCCTTCTTCACCCTGGTAGTGTTTTCTCTCATCTCCCTCATTTTCCCATTTCACATCTCATTTCACCTC ..::..:.:..x.:x.:x..::............::...x....xxxxx.x::.....:.x..:....:x::.....x.:..x.x..:.x:...x.:.. 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 91698275 NA +3377 chr4 + 190214555 184676992 184676991 184677074 83 CCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCCTCCCCTTCCCCTTTCCCTTTCCTTT chr4 + 94230402 83645378 83645377 83645450 83645378 83645377 83645450 73 CCTACTCCCTCCCTCCTTCATTT----------TTCCCCCTTTCCTTTCCTTTCCTACTCCGATTCCCTTCTCCTACTCCTCT ...x......:..:.....x:..----------.........:....:....::.:x....xx.....:.:...:x:....:. 23M10D50M 54/73 74.0% 73/94230402 0.0% 10/73 13.7% 101031614 89182941 +3519 chr4 + 190214555 184684316 184684315 184684385 70 CGTGGTGTTGCACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::...x......--....:.:.........::::........x.xx.x...x.:.............. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 108651119 81563436 +3537 chr4 + 190214555 184708084 184708083 184708166 83 CGTGGTGGCGCATGCTTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGTGAATCGCTTGAACCTGGGAGGTGGAAGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:...:.--....:.:.......:...::........x.xx.....x.:........::.:..x.xx::.:..:.. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 108674887 81539668 +3364 chr4 + 190214555 184709351 184709350 184709429 79 GTGGCACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTTCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....::..:.--......:...........::........x.xx.x...x::.........:.:..x.xx:..:.x:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 108676150 81538405 +3705 chr4 + 190214555 184777319 184777318 184777400 82 ACATGGTGGCACACACCATGTCGCAGCTACTTGAGAGGCTGAGGCGGGAGGATTGCTTGAACCCAGGAGGTTGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....::...::xxx..:x...........:........x.xx.x.:.x::...........:..x..x:.....:.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 108744123 81470432 +3036 chr4 + 190214555 184777547 184777546 184777597 51 AAAGAGGAGAGATTGAGAAAGAAAAGAAAAAAGGAAGGAAAGGAAAGGAGA chr4 + 94230402 3574035 3574034 3574085 3574035 3574034 3574085 51 AAAGAGGGGGGGTGGGGAAAGAAAAGGAAAAAGGAATGAAAAAATAAAAGA .......:.:.:.x.:..........:.........x....::.x.::... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 181203512 9011043 +3032 chr4 + 190214555 184804581 184804580 184804637 57 AAAAAAGAAAAAAAAAAAAAAAGACCCTAGATGCTAGAGCCAAATTCTGCCTCCCTG chr4 + 94230402 43064241 43064240 43064297 43064241 43064240 43064297 57 AAATAGGAAAAAAAAAAAAAAAAACCCTGGCATTTGAAACCAGATTATGCTTCCTTG ...x.:................:.....:.xxx:.::.:...:...x...:...:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 141740340 48474215 +4151 chr4 + 190214555 184826078 184826077 184826184 107 CTCGCCGCGCCGGCCCCGCC----CTCCCGCGGCCCCGCCCCGCCCGCAGGCCCCGCCCCCGGCAGGCCCCGCCCCGCCGAGCGCCCGGCCGCCCTCCTGTCTGGGCGCGC chr4 + 94230402 2428592 2428591 2428700 2428592 2428591 2428700 109 CCCGCAGCTCCGCCCCCAGCGGTGCCCTCACGGCCCCGCCCCGTCAGCAGCCCCCGGCCCGGACAGGCCTCG--CCGCCTCAGGCCCCGccgcccccgcctccgcccccgc .:...x..x...x....:x.----.:.:.:.............:.x....x.....x...x.:......:..--.....xx:x....x.......:.x:x..:.xx.x... 20M4I48M2D37M 76/105 72.4% 109/94230402 0.0% 6/105 5.7% 182397486 7817069 +3132 chr4 + 190214555 184829947 184829946 184830036 90 CATGGTGGTGTGCACCTGTAGCCTATAGTCCCAGCTACATGGGAGGCTGAGGTGGGAGGATCTCTTGAACCCAGGAGGTCGAGACTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG---------TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......::.:---------.:....:........x..::........x:xx.x.:.x.x...........:..x.:x:.:...:.. 14M9D67M 56/81 69.1% 81/94230402 0.0% 9/81 11.1% 108796750 81417805 +3188 chr4 + 190214555 184863943 184863942 184863992 50 GCAGTGTTATGTTTTCTCCTTTTCTCTGTCAATGAGATGAATTTTACGTT chr4 + 94230402 22975984 22975983 22976033 22975984 22975983 22976033 50 GCAGTGATGTGTTTTATTTTTTTCTCTCTCAATGAGATGAATTCTAGATT ......x.:......x.::........x...............:..x:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 161887959 28326596 +3395 chr4 + 190214555 184881124 184881123 184881187 64 GGTGCATGCCTGTAATTCCAGCTACTCGAAAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAG chr4 + 94230402 76033203 76033202 76033264 76033203 76033202 76033264 62 GGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......:.--....:...........:...........x.xx.x...x::........::.:.. 8M2D54M 49/62 79.0% 62/94230402 0.0% 2/62 3.2% 108847921 81366634 +3555 chr4 + 190214555 184891410 184891409 184891482 73 TGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGAAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:...........::........x.xx.x...x::........::....x.xx:.....:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 108858205 81356350 +3441 chr4 + 190214555 184896473 184896472 184896528 56 GTGCCTCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCATGAGAATCGCTTAAACCC chr4 + 94230402 76033204 76033203 76033259 76033204 76033203 76033259 56 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCC ....x:x......:............:........x.x..x...x.:...:..... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 108863269 81351286 +3014 chr4 + 190214555 184925643 184925642 184925714 72 GCACCTGTAGTCCCAGCTACTCGAGAGGCTCAGGCAGAAGAATTGCTTGAACCTGGGAGGTGGAGATTGGAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:..:.....x..x.xx:x...x::........::.:..x.xx:.::..x.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 108892437 81322118 +3097 chr4 + 190214555 184929316 184929315 184929362 47 ATGCCTGGTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTA chr4 + 94230402 16440466 16440465 16440512 16440466 16440465 16440512 47 ATGCCTGGGGAATTTTTTTTTTTTCCCTTTTTACTTTTCTTTTTGTA ........xx..............:::.....x:....:........ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 168488850 21725705 +3733 chr4 + 190214555 184998924 184998923 184998999 76 TGGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033202 76033201 76033277 76033202 76033201 76033277 76 TGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.:.x......:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 108965722 81248833 +6199 chr4 + 190214555 185015486 185015485 185015617 132 CACAGCTGGCCAGTAGCAC--TATGTGATGTCACCTG--------GGTGCCTGAAGGCCC-CCATTCATTTGCCTGATTTTGGTCAATTAAACAAACTTCAGGAGGAATTACTGTGGCTTTTTCAGGGAGGCTAGAGCTTTCT chr4 + 94230402 40799974 40799973 40800116 40799974 40799973 40800116 143 CGCAGCTGGCCCGGAGCGCATTGTGCGCCGTCACCTGCGAGCGGGGTCGCCGACAGACCCGCCATTCATTTGCCTAATTTTGGTCAATTTAACAAACTTCGGGCGAAATTATTGTGGCATTGTCCGCCGGAGTAAAGCTTTCT .:.........x.x...:.--.:..:.x:........--------.x:...x:x..:...-..............:.............x..........:..x.:.....:......x..x..x.xx:.:x..:........ 19M2I16M8I15M1I82M 103/132 78.0% 143/94230402 0.0% 11/132 8.3% 144215512 45999043 +3555 chr4 + 190214555 185028380 185028379 185028452 73 TGCGCATGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCAATTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.:....:...........:.::........x.xx.x...x..x........:.:..x:xx:..:..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 108995175 81219380 +3048 chr4 + 190214555 185034516 185034515 185034572 57 TCCTCAAAAAAGAAATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 + 94230402 6857600 6857599 6857656 6857600 6857599 6857656 57 TCCTCAAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGTTTG .......:...x.x...::..::.::..:.:x:.........x...........x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 178176916 12037639 +3048 chr4 + 190214555 185034525 185034524 185034573 49 AAGAAATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 + 94230402 6857605 6857604 6857653 6857605 6857604 6857653 49 AAGAAATATATACGTACATACGTATAGATGTGTGTGTCTGTGTGTGTGT ............:..:::.::..:.:x:.........x........... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 178176920 12037635 +3182 chr4 + 190214555 185037314 185037313 185037373 60 CCAATAGTCCCATAAACAGTTTTTTTGTTTGTTTGTTTGGTTTGTTGGTCGGTTGTTTTT chr4 + 94230402 31166921 31166920 31166974 31166921 31166920 31166974 54 CCAACAGTCAAAT------TTTTTTTTTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTT ....:....xx..------.......x...............x......:....x..... 13M6D41M 47/54 87.0% 54/94230402 0.0% 6/54 11.1% 153870393 36344162 +3474 chr4 + 190214555 185042129 185042128 185042215 87 TGTGCCTGTAGTCCCAGCTATTTGGAAGGCTGAGGCAGGAGGGTCACTTGCGCCCAGGA-CGTTGAGCTGCAGTGAGCCATGATGGCA chr4 + 94230402 76033205 76033204 76033289 76033205 76033204 76033289 85 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG---AACATGATGCCA ..::.x......:.......:...:.........x.xx.x.::x......x:.....:.-.x...:....:..---:x.......x.. 59M1I13M3D12M 62/84 73.8% 85/94230402 0.0% 4/84 4.8% 109008924 81205631 +5620 chr4 + 190214555 185046603 185046602 185046882 280 GCTTTTGCAACTGCTGTTTTAGGGAAAGATTCATTCTTTCCACTATGGCTTGTCCTTGAGAATTACATGGGATAAGAGTAATGTGTTTAATATTCCACATAGAGAAAAATGTACCTAGAGCTTGGCTAGCATAGCCTGGGGCATTATCTGTTTTAATAGAAGCTGGAATGCCCATCACCACAAAACACTGCAAAAGGTGACGTTTAACACAGGCGGAAGACTCTCCTGATTGGCATGTAGCCCAGACAAAGTGAGAAAAGGTGTCCACACATACATGTAC chr4 + 94230402 19065321 19065320 19065600 19065321 19065320 19065600 280 GCTTCTCCAAATACCTTTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAGCCTTTTCTCCAGGTTGAGCGGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTAC ....:.x...x.:.:x.....:x.xxxx...:::::x...:.....x.::..x...xx:.:xxx::x::.....xxx...x.......x.:x::...::.xx:x.:...:x:x..x..xx:x:.:....::...x.....x....:........x..xx:x:x...x..:.....x...:....:..x::xxx:..:..x.x..:x...::x:::.xxxx:.....x.:...:xxx..:.....x.:...:...xx.x.x..:..:.:.x.:..:..... 280M 158/280 56.4% 280/94230402 0.0% 0/280 0.0% 165981282 24233273 +3060 chr4 + 190214555 185065791 185065790 185065862 72 GCACCTGTAATCCCAGCTACTCAAAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:.........::..........x.xx.x...xx:.x.......:.:..x:xx:.x...:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 109032585 81181970 +3257 chr4 + 190214555 185084816 185084815 185084850 35 CATTAAAAACAAACAAACAACAACAACAACAAAAA chr4 + 94230402 22215895 22215894 22215929 22215895 22215894 22215929 35 CATTAAAAACAAACAAACAACAACAACAACAAAAA ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 162868921 27345634 +3801 chr4 + 190214555 185088190 185088189 185088250 61 GTGTGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x..................::........x.xx.x...x.:...........:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 109054986 81159569 +3080 chr4 + 190214555 185096849 185096848 185096943 95 TTTGTTAATCTTTCTGTCAAACACACACACACACACACACACACACACACAAAAGAAAAGAAAAAGAAAAAGAAAAAGAAAAATGGACCTTGTCA chr4 + 94230402 18334664 18334663 18334750 18334664 18334663 18334750 87 TTTCCTGATATTTTGGTTAGTTATACGTGTGCTTATACAAACACACACACAAAAGAAA--------GAAAAAAAAGTGAAAAACAGTACTTGCCA ...x:.:..x...:x..:.:x:.:..:::::.x:.:...x..................--------:....:...:x......::.xx....:.. 58M8D29M 58/87 66.7% 87/94230402 0.0% 8/87 9.2% 166762185 23452370 +3080 chr4 + 190214555 185096874 185096873 185096922 49 CACACACACACACACACACACACACAAAAGAAAAGAAAAAGAAAAAGAA chr4 + 94230402 70425770 70425769 70425818 70425770 70425769 70425818 49 CACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAATTAGAA ....::.........:........x....:..:.:.....:..xx.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 114671104 75543451 +3430 chr4 + 190214555 185096876 185096875 185096930 55 CACACACACACACACACACACACAAAAGAAAAGAAAAAGAAAAAGAAAAAGAAAA chr4 + 94230402 70425770 70425769 70425824 70425770 70425769 70425824 55 CACATGCACACACACGCACACACAAAAAAAAAGAAAAAAAAAATTAGAATGCAGA ....::.........:...........:..........:....xx.:..x.x.:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 114671106 75543449 +3135 chr4 + 190214555 185096882 185096881 185096924 43 CACACACACACACACACAAAAGAAAAGAAAAAGAAAAAGAAAA chr4 + 94230402 39686918 39686917 39686960 39686918 39686917 39686960 43 CACACACACACACACAAAAAAGAAAAAAAATAGAATGAGAAAA ................x.........:...x....x:...... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 145409964 44804591 +3051 chr4 + 190214555 185096883 185096882 185096928 46 ACACACACACACACACAAAAGAAAAGAAAAAGAAAAAGAAAAAGAA chr4 + 94230402 37755130 37755129 37755175 37755130 37755129 37755175 46 ACACACACACACACACAAAATGAAAAAAAAAGCAGAGGAATGAGAA ....................x:...:......x.:.:...x:.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 147341753 42872802 +3671 chr4 + 190214555 185102929 185102928 185103012 84 ACCTGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCAGGAGATGGAGGATGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::.........:--....:.:...........::........x.xx.x...x.:......x....:..x.xx:..x..:.. 15M2D67M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 109069733 81144822 +3541 chr4 + 190214555 185103603 185103602 185103676 74 GTGCACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCGTGATCGCAGGAGTTTGAGACTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x..................::........x:xx.x.:.x::.x...x.x...:..:..x:.:...:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 109070399 81144156 +3593 chr4 + 190214555 185109469 185109468 185109565 97 GTGGCACATGCCTGTAGTGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....::..:.--......x...........::........x.xx.x...x::.......:...:..x.xx:..:..:..------..x..x...... 10M2D67M6D12M 66/89 74.2% 89/94230402 0.0% 8/89 9.0% 109076268 81138287 +3559 chr4 + 190214555 185122291 185122290 185122364 74 GCGCGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:..:.x......:.........:x.:........x.xx.x...x::...........:.:x.xx:.....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 109089087 81125468 +3094 chr4 + 190214555 185133023 185133022 185133084 62 AAAAAAAAAAAAAAAAAAAAAAAAAATCTCAAAGAGATGTTCTTCACCCACGTGCATAGGCA chr4 + 94230402 31241794 31241793 31241855 31241794 31241793 31241855 62 AAAAAAAAAAAAAAAGCAAAGAAAAACTTTGACGAGTTATTCTTAACTCACACTCATGAACA ...............:x...:.....::.::.x...x.:.....x..:...::x...:::.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 153891229 36323326 +3061 chr4 + 190214555 185133653 185133652 185133723 71 CACCTACAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x.::.:.:...........::........x.:x.x...x::........::.:..x:xx:..:..:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 109100446 81114109 +3079 chr4 + 190214555 185152825 185152824 185152885 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGAGGGAGGATTGCTTGAGCCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........xxxx.x.:.x::.....:..::.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 109119621 81094934 +3227 chr4 + 190214555 185168467 185168466 185168536 70 CATGGTGACACACACCAGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::...:::...::--...:.:...........::........x.xx.x...x..........::.:.. 15M2D53M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 109135270 81079285 +3615 chr4 + 190214555 185168776 185168775 185168854 79 AGTGG-GCAACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTTGCTTGAACCCAGGAGCTGGAGGTTGTTGGA chr4 + 94230402 76033200 76033199 76033279 76033200 76033199 76033279 80 AGTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAA .....-...xx....:.:...........::........x.xx.x..:x::...........:....xx:..:...x.:. 5M1I74M 58/79 73.4% 80/94230402 0.0% 1/79 1.3% 109135576 81078979 +3354 chr4 + 190214555 185193515 185193514 185193588 74 GTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.x....:.:.........::::........x.xx.x...xx:.x.........:..x.xx:.....:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 109160311 81054244 +3060 chr4 + 190214555 185196970 185196969 185197041 72 GCGCCTGTAATCCCAGCTACTCAAGAAGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:.........::.:.:......x.xx.x...x::......:....:..x:xx:..:..:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 109163764 81050791 +3268 chr4 + 190214555 185201186 185201185 185201268 83 CGTGGTGGCCCATGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAAGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....:x..:..--...:.:...........::........x.xx.x...x.x...........:.:x:xx:..:..:.. 15M2D66M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 109167989 81046566 +4026 chr4 + 190214555 185214437 185214436 185214515 79 GTGGTGCACATCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCGCTTGAGCCCAGGAGTCTGAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:.--.:...:...........::........x.xx.x.:.x.:.....:.....:..::.x:.....:.. 11M2D66M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 109181236 81033319 +3542 chr4 + 190214555 185261132 185261131 185261200 69 GTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATAATTTTTTATTTTTATTTTTATTTTTTCA chr4 + 94230402 33250994 33250993 33251062 33250994 33250993 33251062 69 GTTTTTTTTTGTGTGTGTGTGTATATATGTGTATATATAGAGTTTTTGTTTGTTTTTATTATTTTTTTA ..x.x.x.x.............:.:.....:.:......x.:.....xx..x..x..x.........:. 69M 53/69 76.8% 69/94230402 0.0% 0/69 0.0% 152010138 38204417 +3897 chr4 + 190214555 185279871 185279870 185279934 64 TAGTTTTTGTTGTTGTTGTTTTGTTGTTTTTTTTGTTTGCTTGTTTCTGTGCTTTGTTTTGTGT chr4 + 94230402 23734020 23734019 23734081 23734020 23734019 23734081 62 TGGCTTTTGTTGTTGTTGTTTATTTGTTTTTTTTGTTTG--TGTGTGTGTGTTTTGTGTTGTGT .:.:.................xx................--...x.x....:.....x...... 39M2D23M 54/62 87.1% 62/94230402 0.0% 2/62 3.2% 161545851 28668704 +3460 chr4 + 190214555 185279875 185279874 185279921 47 TTTTGTTGTTGTTGTTTTGTTGTTTTTTTTGTTTGCTTGTTTCTGTG chr4 + 94230402 89868343 89868342 89868389 89868343 89868342 89868389 47 TTTTGTTGTTGTTGTTTTGGTTCTTTTTTTGTTTGTTTGTTTTTATG ...................x.x:............:......:.:.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 95411532 NA +3200 chr4 + 190214555 185303519 185303518 185303588 70 CGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::......--...x......:...........:.........x.xx.x...xx:.x......::.:.. 10M2D58M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 109270322 80944233 +3102 chr4 + 190214555 185319178 185319177 185319234 57 TTCTTTGA---GAAAGTCCTTTTTTTTTTTTTTTTTTTTTTTGATGGAGTTTCCCTCTTG chr4 + 94230402 55983736 55983735 55983795 55983736 55983735 55983795 60 TTCTCTGATGTGAAAGTCCTTTTTTTTTTCTTTTTTTTCCTTATGGCAGTTTTCCTACTG ....:...---..................:........::..:xx.x.....:...x:.. 8M3I49M 46/57 80.7% 60/94230402 0.0% 3/57 5.3% 129335442 60879113 +3581 chr4 + 190214555 185325403 185325402 185325475 73 TGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGCGAGGCAGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:.x......:...........::........x.xx.x...x...........:x:..x:xx:..:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 109292198 80922357 +3596 chr4 + 190214555 185350731 185350730 185350791 61 GTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x......:...........::........x.xx.x...x::..x........:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 109317527 80897028 +3556 chr4 + 190214555 185353904 185353903 185353986 83 CATGGTGGCGCATGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:...:.--....:.:...........::.:......x:xx.x...x::...........:..x.xx:..:..:.. 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 109320707 80893848 +3039 chr4 + 190214555 185375461 185375460 185375513 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 1495000 1494999 1495052 1495000 1494999 1495052 53 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATAT ...x.:.........x.:......x.x......:.:..:...:.....x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 183880461 6334094 +3053 chr4 + 190214555 185375463 185375462 185375513 51 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAT chr4 + 94230402 90030076 90030075 90030126 90030076 90030075 90030126 51 AAATAAAAAAATTTGAAAGGAAAAAATATATATACACACATATATATATAT ...x.......xxx:...::..............:.:.:............ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 95345387 NA +3413 chr4 + 190214555 185375463 185375462 185375518 56 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:......x........:.:..:...:.....x.....:. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 183880463 6334092 +3374 chr4 + 190214555 185375465 185375464 185375520 56 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:...............:.:..:...:.....x..:.::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 183880465 6334090 +3160 chr4 + 190214555 185375467 185375466 185375522 56 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATATA chr4 + 94230402 1495000 1494999 1495055 1495000 1494999 1495055 56 AAACAGAAAAAAAAATAGAAAAAATATATATATGTGTACATACATATAGATATGCA ...x.:.........x.:....x..........:.:..:...:.....x:...::. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 183880467 6334088 +3078 chr4 + 190214555 185375469 185375468 185375551 83 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATATATATATGTATTAAAATATAAATAATTTTAA chr4 + 94230402 51472490 51472489 51472572 51472490 51472489 51472572 83 AAATACACAAAGGAAAAAAGTAAATATACATATATAAACACATATATACCTACACATATGAGGAAAAGTGAAAGAAGTTCAAA ...x.x.x...::......:..x.....:.......x.:.:......::x..:.:.....x:xx...:.:x..:x.:..:x.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 133902979 56311576 +3052 chr4 + 190214555 185375470 185375469 185375523 54 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATATAT chr4 + 94230402 85548420 85548419 85548473 85548420 85548419 85548473 54 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATAT .............:.:xx....:...:.:.:.::...:........:.x..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99827050 90387505 +3453 chr4 + 190214555 185375472 185375471 185375555 84 AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATATATATATGTATTAAAATATAAATA---ATTTTAATTGT chr4 + 94230402 85548420 85548419 85548499 85548420 85548419 85548499 80 AAAAAAAAAAAAAGAGTTATATGTATGTGTGTGCATACATATATATATTTATA-------TCAGACATGGATATCCATTTTAGTTGT .............:.:x.....:...:.:.:.::...:......:...x....-------.x.:.:..::...---......:.... 53M7D13M3I11M 59/77 76.6% 80/94230402 0.0% 10/77 13.0% 99827052 90387503 +3075 chr4 + 190214555 185407007 185407006 185407055 49 TTTGGCTTTTCTTTTTTTTTTTTTTTTTTTTTAGAAAATGTATTTTTCT chr4 + 94230402 15446864 15446863 15446912 15446864 15446863 15446912 49 TCTTGTTTTTCTATTTTTTTTCTTTTTTTTTTTCCAAATGTATTTTTCT .:.x.:......x........:..........xxx.............. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 169960143 20254412 +3385 chr4 + 190214555 185423660 185423659 185423847 188 AGCACTTGCAAAATGGAACTAATCAGTTCTTTA------CTTGGATCCATA---TACTGTTTCAGGTAGT------TGATGATATATCACAAATGACATGTATCATTGTTTGTGTACACATATATACACACACAGATACACATATTCATACATATATACATACA------------TATATACACACAC----------ACACACACGAGAGAAAGAGACAGGAA chr4 + 94230402 7596491 7596490 7596715 7596491 7596490 7596715 225 AGCTCTGACTAAAATGAACAAATCTTTTCCTTAGCAATTCTAGAAATCACAAGTTAATTGCTCAGAAGGTATTCTTTTATGATACATGAGAAATAATGTGAAATTATAACTTTGTTTATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACATGATGTTAACAACCTAGACTAAATAAAAAGGAAGGAA ...x..x:.x...xx....x....xx...:...------..x.:.x:..:.---..x.xx:....:x:..------.x......:..x.x....:.::..x.x:xx.:x:.x...x:.:.:x....x.......x..:....x.......:...:...x.:...------------..:...:x....:----------..x:.x..x.:.x...:..:x..... 33M6I12M3I16M6I88M12I13M10I26M 124/188 66.0% 225/94230402 0.0% 37/188 19.7% 177827169 12387386 +3356 chr4 + 190214555 185428551 185428550 185428678 128 CTGTCTAAAAAAAAAAAAAACAACAACAACAACAAAAAAAAAAGAGACTCTGTCTTAAAAC-----------AATTAATTTCTAAATAAAGA---GTTGCATGTTTAATATTTCACCTTTGTTTGAAGTGGTCATTTCCAAA chr4 + 94230402 73664708 73664707 73664838 73664708 73664707 73664838 131 CTGTCAAATTATAAAAGAAACAACGACAACAACAAAAAAAAAAAAAA---------AAAACCCACAAAGATAAATGAATT--TAAACAATGATATTTTTCATCTTTACTTTTTCACATGATTTGGAAAAGATAATTATCAGA .....x..xx.x....:.......:..................:.:.---------.....-----------...x....--....:..x..---x..x...x....x.x......x.xxx..x...:x.:.x...x:..:. 47M9D5M11I8M2D10M3I47M 89/117 76.1% 131/94230402 0.0% 25/117 21.4% 111763843 78450712 +6794 chr4 + 190214555 185429344 185429343 185429561 218 TAAAACACGTGACCCTAGGGAAACTTTTGAAGTTAGCGGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGGAAGGAGGAAAAACGGACATGGAAAGGATTGGCCTCTTTAGTGAGATGGAATATATTACTGTGGGTGATAAATATGTGTCACAATTTAATCGTAAGTATATTTGCTTTT---CTCTATGGACGAATAGTGGGTATTTTCTATAT chr4 + 94230402 62871507 62871506 62871713 62871507 62871506 62871713 207 TAAAGCACATAAAC--AGAGATACTTCTACCTTT-------TAGAGTGGTACACTGTCA--CCCAGCCATGCCTACAGAAGGA---AAAAGTGATATGGAGAGGACTGGCCTCTTCAGTGAAATGAGCTATGTTACCATTGGAGATAAATATGTATCACCTTATATGCGTAAGTATATTTAATTTTAACCACCATGTAAAAATAGGGACTCCTTTTAGTAT ....:...:.:.x.--..:..x....:.:xxx..-------.....x.xxx...:::..--.x.x:........:.:......---....xx..:.....:....:.........:.....:...::x...:....::.x..x...........:....xx.x..xx.............:x....---.x.:...x.x:.....x.:x.x:...:x:... 14M2D18M7D18M2D22M3D100M3I32M 145/204 71.1% 207/94230402 0.0% 17/204 8.3% 122557837 67656718 +3960 chr4 + 190214555 185431070 185431069 185431152 83 CATGGTGGTGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--......:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 109397873 80816682 +13520 chr4 + 190214555 185431965 185431964 185432210 246 CTAATTTATCTTTAAAGGACCCTTTAATGAGGCTGCAAGCAAAAATAAACAGATGCTACCTGGAGGGTCCAAAGAAATGTCAGATCTTCAGGCAGGTTATTTTGATCCCCATTTTGTAAGGATTTTTGAAGGTGAAGGCTACATAAATCTGAATCAAGTGAGGAGACGGGATATGGTGGAAGCAGCCAAAAAAAATCTAGGCAAAGCATTCCTCCCTAGTAATGGAGAGAAAAAGCCGTAAGTGTT chr4 + 94230402 62872728 62872727 62872973 62872728 62872727 62872973 246 CTTACTTTTTTTTAAAGGCCCTTTTAATGAAGCTGCAAGCAAGAACAGACAGATGCTATCTGAGGGGAGCAAAACATTATCAGCTCTTCAGGCAGGTTATTTTGACCCTCAGTTTAAGAGGATTTTCAATGGTGAAGCCTACTCAAACCCTGTTCAACTAAGGAGACGTTACAGATTGGCAGAATCAAAGAAAAATTTGGGCAAAGCCTTCCTTCCCAGTAATGGAGATAAATTGCCGTAAGTGTT ..x.:..x.:........x..:........:...........:..:.:..........:...::...xx....:x.x.:....x.....................:..:..x...:x:........::.x.......x....x:...:.:x:x....x.:........xx.:.x:x...x..x.x.x..:......:.:........x.....:..:...........x...xx............ 246M 188/246 76.4% 246/94230402 0.0% 0/246 0.0% 122559237 67655318 +11008 chr4 + 190214555 185436040 185436039 185436367 328 TTTAAGATGTGGCTTAGGAAGCTACTATGGAACAATAGGTGGTCCAGTCCCATTTTTCAGCGCACAGTCAAAACCTCGAGAAAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGGTAAGATATTTTTAATACTTTGTCATATCGTTTGTTTTGAAATTTAAAAAAATTAAATTTCTGAATTCTGAAGTCACCATTACTTACTTTGCTTTCT-TAGCTATGCAAATATTACCATAGGTAAACAGTTTTCACACTCTGCCGACTTCTATGATGCAGCAAAACTAAAGTATAAGGTAAAAAA chr4 + 94230402 62873313 62873312 62873623 62873313 62873312 62873623 311 TTTTAGAAGTGGACTAGGCAGCTATTACGGAACCATAGGAGGTCCATTTGAATACTTCAGTGCACAACTGAAAGCCAGAGAAAGATACATTCCTCCTGGAAAGAATTTTTATACTAGTCCAGGAAAAAAAGGAACTGGATATGGGTAA------CTTCACATTACTTCTTGCAGTCTTTTGTTAAAT------------GCTTTTTGAGTTTTGAGTATCTAACTAATTCATTCTCTTTTTACAGTTATGCAAATCTTACCATAGGTGAACAATATGCACATGAAGCAGATGGCTATGAATTAGAAAAAATAATTGCAAAGGTAAAAAA ...x...x....x:....x.....:..:.....x.....x......x.:xx..x:.....:.....::::...x.:x......:.....xxx.x..............x..:..x.::..:.....:.....................------:..x.:.:.x:x..x.::x..:.x..x.x....------------:x...:...:..:...:xx:x:x.:..x..xx..:x....:.-:..:.........x...........:....:.x.x....:xxx..x..:xx......xx:..x....x...xxxxx........... 148M6D33M12D42M1I87M 216/310 69.7% 311/94230402 0.0% 19/310 6.1% 122562727 67651828 +3415 chr4 + 190214555 185443302 185443301 185443366 65 AGAAATATTATTTTTTATGTA---TATATATATATATATATATATTTTTTTTTTTTTTTTTTTGAGAT chr4 + 94230402 24792603 24792602 24792670 24792603 24792602 24792670 68 AAGAACAGAATTACTTATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAAT .::..:.xx...x:.......---..................x:........x.........::.:.. 21M3I44M 52/65 80.0% 68/94230402 0.0% 3/65 4.6% 160650699 29563856 +8497 chr4 + 190214555 185444909 185444908 185445136 228 ATTTTGTAGA--GGCATTTTACAAAATCACATTAAGTTGTCTCGTTTTTCTTCGCAGCCTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACCCTTATGTGGCTAAAT------TGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGAAGGTGGGA chr4 + 94230402 62876560 62876559 62876778 62876560 62876559 62876778 219 ATTCTGTAGATTAGCACTTTGAAAGGTTA-----------------TTTTTTTTCAGTCAGGGGGCATGAAAGGAGGCACGTTTGATCCTTATCCAAGCCATTCTGCTGACCCTTATGTAATCAAAAAAACTATGGCTGTCCCATCCAGTAAAGAACAAAAGGTTTTTCATCCTCCTGCTGGACCAAAAAGCAGACCTGTTACAAGTATAGTGACTCTAAATGTCCTAAGGTAAGA ...:......--:...:...:x..::.:.-----------------...:..:x...:.x..x..x.....:.x...x..:...........:...xxx....................::::...x------....x:x:x:x..::.:.....xx.x...:....:..:..x..x:x..................x...:x.......:.....:.:......xx.....::.. 10M2I17M17D81M6I103M 153/211 72.5% 219/94230402 0.0% 25/211 11.8% 122568349 67646206 +3288 chr4 + 190214555 185453528 185453527 185453581 54 AAGCACACAGTCTTGCTTTTTTTTTTTTTTTTTTTCCCGAGACAGGGTCTTGCT chr4 + 94230402 68570130 68570129 68570179 68570130 68570129 68570179 50 AAACACACATTCTTGCTTTTTTTTTTTTTTTTTTTCCT----CAGGTTCTTTCT ..:......x...........................:----....x....x.. 38M4D12M 45/50 90.0% 50/94230402 0.0% 4/50 8.0% 116883398 73331157 +3296 chr4 + 190214555 185480201 185480200 185480272 72 GCACCTGTAGTCCCAGCTACTCGGGGGGCTGAGACAGGAGAATCGCTTGAACACAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.:::.......x.xx.x...x.:.......x...:..x.xx:.x:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 109446995 80767560 +13030 chr4 + 190214555 185502101 185502100 185502541 441 GTATGTTTTTTTCACATAGCAGGCATTTGCCTCCCATTCCTTTTCCTCAATAAACAATAGGATAAAGGTCTAAAGCCTTGACTTTAGATTTGGAGTTGACAATCTGCACAATCCTTCTG---CCCAAAGCCATGAATGTCTTCTCGTGTAAGTGCGCGTGGGTGGGTGCGTGCGTGCGTGCCACGCCTGCAGAGACTTAAGCTTTGGGATACAGAGTGACCGTGTCATAGCCCTCTGGGGGCTTTGTGCGGGCTCTTGCGTGGGTTTCGCAGTACAGCTCCCCTTCTATGAAGAAGTAGCCCTTTTGCTTGAGGTTGAGGTTGCAGTCGGCACACACGAAGCACTCAGGGTGCCGGTACTTATCCCGCGCCTTCACCACAGCACCGCTGT-------TGGGGAAGAAAACGAGCTCAAGTTAA-----AAAACCACAGAGCAAAAATATGAGACAA chr4 + 94230402 62897137 62897136 62897564 62897137 62897136 62897564 428 GTATGTTACTGCTGATTAACAGGGACTTCCACCTCG---------CTCAGAATACCACAAGAGAAGGTTTAAAAGCCACTACTTTGAATTCAGA--CAGAAGTCCTGACAGTTGTAATGAAGTTCTAAGCTGTTAAAGGCTTCTTGTGTGCATGCATGTATTTGTGTGCTAATGTA----------------AGACTAGCATTTTGGG-TAAACAGTAACTGCTTCATATCCCTCTGGGGGCCTCATGCGAGCTCGTGCATGAGTTTCACAGTACAGCTGGCCCTCCACAAAGAAGTAGCCTTTCTGTTTCAGGTTGAGATTGCAGTCAGAGCACACAAAACATTCTGGGTGTCGGTATTTATCACGTGCCTTCACCACTGTTCCTCTGTGTGAAAACAAGAAAAAAAATTAATTCATATTAATTCAGAGTGCAAAGAAGCTAAAGTATAACACAA .......x:.x:::xx..:....x.:..x.x:.:.:---------....:x.x..x.:.:..x..:.x.:x......x:x.....::...::..--:::x.:..:xx...:.:x.xx..---::.x....::.x..x.x.....:....:x:...::..:xx..x....xx::..:----------------.....x:x::......-..x.x...:..:.:x.....x............:.::....:....x...:..:.....:..........xx..:..:.::...........:..:..:..x........:........:.x:.....:..:..:..x.....:.....:.....x..:...........x.:x..x....-------:::.:..:....:x.::...x:....-----.:x:.x.x::...x...:...:.x.... 36M9D49M2D23M3I54M16D16M1D181M7I26M5I28M 275/413 66.6% 428/94230402 0.0% 43/413 10.4% 122604964 67609591 +3041 chr4 + 190214555 185503095 185503094 185503166 72 GCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x......:.........:.::........x.xx.x...xx::x.......:.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 109469889 80744666 +5812 chr4 + 190214555 185504468 185504467 185504609 142 AACTTACACTATGCCACTCCCACATTTGTCACAGAGCGGCATCCTCTGTGCCCCGCCTGAACCGCCATGGACTTTCGTCACCGGAGCTCTCACACTCCGCGTTCCAGCCGGACGGTCATCTGAAAAACAAAGCGTTTCCATT chr4 + 94230402 62898281 62898280 62898422 62898281 62898280 62898422 142 AACTTACAGAATTCCACTCCCACATTTGTCACACTGTGGTACTTTCTGGGCTCCAGGCAGGCCAGTAGGTATCTTTGTTACAGGTGCTTTCACACTTCTTGTACCCACTGGACGTCCATCTGAGATCCAAAATATTTCTGTT ........xx..x....................xx.:..:.:::....x..:..:xx::::..:x:.x.x.::..:..:..x..x...:.......:.x:..x..x:.:.....x:.......:.xx....:::....::.. 142M 94/142 66.2% 142/94230402 0.0% 0/142 0.0% 122606187 67608368 +5715 chr4 + 190214555 185506544 185506543 185506676 133 CTGGAGCACTCTGAAGGAGCCCGACTGGCGAGGCTGTGTGGGCTCATTCCGATTGTCGTGGAGCATCCGGTACACGTCCGACTCGGGGGGCACCGAGGCTGTGGGCTCGCTGAAACACAGGCACGGCGGGGAG chr4 + 94230402 62899494 62899493 62899626 62899494 62899493 62899626 133 CTGGAGCACCTTAAAGGAGCCAGACTGGCGGGGTTGGCTGGGCTCCTCTTGGTTGGAGTGCAGCATCCTGTACACGTCGGACTGAGGCACTGCCGTGGGAGCTGGGTCACTGCATCACAGGGAGGAAGAGCAG .........::.:........x........:..:..xx.......x.:::.:...xx...x.......x.........x....x:..x:x::...x..xx.:x..x..:...x.x......x.x.:x.:.x.. 133M 93/133 69.9% 133/94230402 0.0% 0/133 0.0% 122607050 67607505 +20328 chr4 + 190214555 185508289 185508288 185508673 385 CTCATATTACCTCATCAAAGGTGTTTCCCCTAGGGCTGTTGAAACCTGACCCTGGAGTGTTTCCATAATATTGTCATCTGAGTACAACTGCATAGGTGTATTAAACTGAGCATGTACAATCTTCACACCAGGAAGTTCCATTTCCAAAGGAATGTTAGGGGCCAGCTTAGCCGCAACTTTCAAGTCACCTGGGCAAATGGTACTAACAGTACTGACAGAAGAAGGGGTGCTGCGTCCACTGCCACAGTCAATCCCGGAGGGAGTGCTGCATCCACTGTGTTAATGGATACACGTTACACAGAGATGGCACCGGGAGCCAGACAGTCCAGACAGAAGAACACAGAGAACACGTACAGAGAGGTTAAAAGGAATTGAAGACAAAAGT chr4 + 94230402 62902122 62902121 62902474 62902122 62902121 62902474 353 CTCTAATTACCTCATTACGGGTGTTTCCCCCAGAGCTGTAGAAACTTGGCCTTGCAGTGTTTCCATGATATTGTCATCTGAGTACAACTGCATAGGTGTGTTAAACTGAGCATGTACAATCTTGACACCGGGAAGCTCCATTTCCAGGGGAACGTTAGGGGCCATCCTAGACACTGCTTTCAGCTCGGTGGGGCAGATGGAGCTAACCGTGCTAATTGAAGAGGGGGTACTACGTCCACTGCCACAGTCAATCCCCGAAGGAGTGCTGCATCCACTGTGTTAAT---TACAGATTAC-----------------AGCCAG--AGTGCAGAAAGGTGTGCA----------GTGCGCATCGGATTATAGAGAATAAAGACAAAAGT ...xx..........:.x:...........:..:.....x.....:..:..:..x...........:................................:.......................x.....:.....:..........::....:...........x.:...x.:.x:......:x..:x:x.....:....x:.....x..:..:.:x.....:.....:..:.......................x..:.........................---....x:....-----------------......--...x....x..:x.x:..----------..:.:x.xx..x.x.x..::.x.:........... 284M3D10M17D6M2D18M10D35M 288/353 81.6% 353/94230402 0.0% 32/353 9.1% 122606167 67608388 +23061 chr4 + 190214555 185514077 185514076 185514988 912 ATATTTACTCTTGGAAATGCAAGTTATTTGGCTTCTGTTCTCTGCCAAGTGAG----TTTGTTTCTTTTTGCTTTTGAAATAAGCTTCGCAATGAGAAAAGCCACTC-CAAACATCTACCAGTTACTTTTCTTGATG--ATTAGTAAGAACTGATTTAAGAAG------CATGCACTGCAAACTC--CACAGT-CTCAGCGCTTATGACCTGCTTCGGCCCGGGATCACGAAAGGTTTGGGCCGAATATTATGCTTGTGTTCAAAGTAGTTCCCGTCCTGTGAAAACAA-AGCGTTAAAAAGGCCCTCAGTGGAAGGCGGACACTG--TTGCAGATAAGATTAAACGAACGATAGTTGTACAGGGAGGATCAT-------------TTACCACCAACTACTGTCATAACTAA-----GAAAGGCGATGACG--GGACCAGGACGATGTCTTCTTTCCAACCATCTATCCGCTAAACGGTCAG--------------GCACTG-GCGGATTGGACCCCACAACA-----ATTAGAACATGTT------TTAGATGCTTGTCTTTAAAAGAGAAATCTGATAGTGCCTTCAGGA-AAGTAAAAATAAAACAGCAAGAGCTGGACTTTT-----GAAAAGAAAAGAAACCATGCTATCACTGTTAGGTACACTGTGGCCAGAACAGAGCCGGATACTTACTTTTGAGGTGAGCTAGGAATGAGACCCCGCAGCTGTCCGTGAAGCGCATCTTGTATATTGCTAGTTGAATAGAGCCCAATTGGCGAGTTATAGGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTTGCAGCTGCAACAAAAGGCTGGGCCCTTCTGTTGTGCGCGGTACCAATGGGTTTGAATTCCTGTAC---AATGGCAGACAAAATACACAGCCACACAGCGCACAAGAAAGCCATTAGTGAGCGAAACCAACAGCATCACTACTGTTAATAAAGGCATCTTT chr4 + 94230402 62905432 62905431 62906395 62905432 62905431 62906395 964 ATGCTTGCTTTCGGAAATTTTGAATTTTAGGC--CTGATATCTGC-AAGTCAGGCACTTCAGGTTTTTAAACTTCAGCCATAGGCTATATACTACCATAAGTTATTTTCAAATGCCT--CAGTATGCTATATTAATGCAAACTGTGAGTATCCATTAAAAAAATAACACCATGCATT-CAAACTCATCACAGCACTCAGAGTTTATAACCTGCTTCGGCCTGGGAGTATGAAAGGTTTCGGCCGAATATTATGCCTGTGTTCAAAGTAGTTGATATCCTGTAAAGAAAAGAGGGTTAAAATAGCTTCTTTTGGCCTATAAATGTTTACTTCTAGTTAAAAGGTAGCTGATGAT-GTTTTAAAATCATAACTATGAAGTCACCTTTTTTATTTTGTACATTTCTGGTACTTAAAAGCTGAAAAGTAAAGGTGTTAGAAAAGGATGATAGCAGTGTTGCAG------ATCAG-TAGAGGGGGAGAATTGTAGCTACCTGCAGTGTGCAGATTGAATGTAGAATTTTCTGTGTTGGAAAAAGTTGCTTCATTTATCACTCGTTTTT----TGGATAACCAATAAACTCCTGATTATCAGAAGAAAAAAAACAGCAAGAGCTGGACTTTTTAACTGAAAACAGAACAGATAGTGATATAAC-ACAAAAGACTGCATATTAGAAATAAATACCAGTACTCACTTTTGCGATGCGTTAGGAATGAGACTCCTCAGCTGTCCATGGAGTGCGTCTTGTATATTGCCAGATGAGTACAGCCCAATTGGAGAATTATAGGAGGAGCTCACTACCTGTCTTTTGTCATCAATATTTGCTGCTGCAACAAAAGGCTGGGCCCTTCTGTTGTGAGCTGTACCAATAGGCTTGAATTCCTGTACGTGATAGGCAGACAAAATACACAGAGCTACAATGCACACCAAAGCTAGTAATGAGTAAAACTGA---CATCAGTATTGTTAATCTCTGCATTTTT ..::..:..:.:......x:x::x.x..x...--...x.x.....-....x..----..::xx.:...xx:...:x.xx...:...x:::.x.:xx.x...::.:.:-....:::..--....xxx:.x.x..:...--.x:x..:..x.::x...x..:..:------......:.-.......--.....:-.....x.:....:.............:....x:.:.........x...............:................xx::......:..:.x..-..x.......x:..::::xx...xxx::::.:::.x--..x:..x...:.xxx.:.x:.:...-...x..x.:xx.x:.::..-------------...::x:xx..xx:.x.x:..x:...-----....:.::.x.::.--:..xx....:...:x.xx:x..x..:------...x.-..:.x..xx..--------------...x..-..:.....:.:x:x:x.x:x-----:..:...x.x...------..x:x::..:..:...----x:..x.x.::...:xx:.:.x.xx.-x..x.:...x.......................-----.....x.:..x.:.:x:..x...x..-::x.::x..xx::.:x:x::..:.:.xx.x::....:.......x.:..x.:............:..x.........:..:..:..:.............:..x...:..x...........x..:........:.x...........................:.....x................................x..x........:..:..............---.xx..................xxx:...::.....xx.....:.x..:....::....::.---.....x..:.......xxxx....:... 32M2D11M1D7M4I50M1I9M2D18M2I24M6I8M1D7M2I6M1I95M1I36M2I25M1D19M13I26M5I14M2I26M6D5M1D11M14I6M1I20M5I13M6I16M4D25M1I33M5I26M1D233M3I61M3D28M 610/890 68.5% 964/94230402 0.0% 96/890 10.8% 122608645 67605910 +8484 chr4 + 190214555 185525018 185525017 185525179 162 ACCTGTCAATTTTGAGACACAGCTGGTGAGCTGCTGCTTTAATCCTGTCCTGCGCATCAGCATGAGTCATGGACTCTGTCCCAAAGCCGTCAATAGCCAGGATGACATCTCCAGGACACAGGTTGGCAGCTGCCGCCTTGCTTCCTGGTGTAATCTGGAAGA chr4 + 94230402 62913243 62913242 62913404 62913243 62913242 62913404 162 ACCTCTCTATTCTCAAGGAAAGCTGATGTGCAGCTGCTTTAATTCTTTCCTGCGCGTCATTGTGTGTCATGTTCTCTGTGCTTAGGCCATTGATAGCCACAATAATATCACCAGGGCACAAGTTGGCAGTAGAAGCCTTGCTTCCAGGTGTAATCTGAAAAA ....x..x...:.x.::x.x.....:..x..x...........:..x........:...x::..x......xx......x.:x.:...:.::.......x:..:.:...x.....:....:........:x.xx...........x...........:..:. 162M 121/162 74.7% 162/94230402 0.0% 0/162 0.0% 122611775 67602780 +3717 chr4 + 190214555 185531969 185531968 185532040 72 GTGCTTGTAGTCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x......:...........:.........x.xx.x...x.:...........:..x:xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 109498763 80715792 +6703 chr4 + 190214555 185535335 185535334 185535601 267 CACCTACCCTGGTGATGACCAAAGGCTGGTTGAAGTCTATGCCCCCTGAGAGCCTGAAGCCCCAGGGCGCAGGGCCCGGGAGGATCACCGTCTGGGGCA-----------TGCCGCCTTCCTCCCGCCCACC-------------------GGGCT--------------------CTAAGTGTCC-CCGCGCAGGGCAGCC-ACTCCGCGCCGGGCGGCGTCCTGGCCCCGACCCGGGCGGGGGCGCTTTATCCCCGCTGGGGGTGACGTCACCGCCCCGCCGTCCTCCCCGCCCCCTCCCACCCCGGAGAGCTCCAA chr4 + 94230402 62917772 62917771 62918075 62917772 62917771 62918075 304 CACATACCCTGGTTATGATCAAAGGTTGGTTAAAATCTATTCCTCCTGAGAGCCTGAATCCCCAGGGTGCCGGTCCTGGAAGAATAACGTTCTGTGGCATCGTGGCTGAGTGCTGTTGGGTTCCTGCTTGTTTTCCTTTGGTGTGTATGAGGGGCTCAGCTGCAGGAGGATGTGTGCTGAGCACCTGCAGGACAGGGTAGCCGACTCC------TGGGATGTTGTGGTCAC--CCCAAGC-ACTGTGCTTTATTCCTGCTCTGGGTGACGTCAGC------CAGTCCCTAGCTTCCCCACCCACCGAGGGGAGTACCAA ...x.........x....:......:.....:..:.....x..:..............x........:..x..x..:..:..:..x..xx....x....-----------...:.::xxx:...:..:::::-------------------.....--------------------..:..:::.:-.x.x:.....:....-.....------x.x.::..:x...:.x.--...::..-:xx.:.......:..:...xx...........x.------.x....::xx.x:....x......xx..:...:x.... 99M11I22M19I5M20I10M1I15M1I5M6D17M2D7M1D34M6D38M 179/252 71.0% 304/94230402 0.0% 67/252 26.6% 122617563 67596992 +3274 chr4 + 190214555 185535337 185535336 185535416 80 CCTACCCTGGTGATGACCAAAGGCTGGTTGAAGTCTATGCCCCCTGAGAGCCTGAAGCCCCAGGGCGCAGGGCCCGGGAG chr4 + 94230402 1833906 1833905 1833985 1833906 1833905 1833985 80 CTTACCTTGGAGACGATGAGGGGCTCGCCGTGCTCCAGTCCCCCCCGCAGCGTGAAGCCCCAGGGCGCGCCGCCCTGGAG .:....:...x..:..:x.::....x.::.x:x..:.xx.....:x:x...x................:xx....x.... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 183701431 6513124 +3255 chr4 + 190214555 185541820 185541819 185541883 64 GAAAGAGGGTGTGCATGAGGGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAGAGA chr4 + 94230402 42888282 42888281 42888336 42888282 42888281 42888336 55 GAAATAGGATATG---------GTGAGTTTGATTGTGTGTGTGAGAGAGAGAGAGAGACAGAGA ....x...:.:..---------...x..x..xx............................... 13M9D42M 48/55 87.3% 55/94230402 0.0% 9/55 16.4% 142653538 47561017 +5740 chr4 + 190214555 185567813 185567812 185568075 263 ACTTTTTTTTTTTTGGAGGGGGTGGGGGTGGTTTTACTTTTTCACAGTGGTTGCTAAGAAAGAATCTTCTGT--TTATAGGCTCCTAACAAATAGTGACAGCTGAAAGACAAATATGGTGCTGTGTTTGCAGGACGA---TGGAAGGGGGCCAGCAACCCGCAGCCTCCAGGCACACACACTCACAAGGAGGCCTTTGAGAGTGCTGCCTGGCATTGTGGGTCCACAGATTGCTTGAAATCATTAAAAAAGGCGTTTGCCTCATACTT chr4 + 94230402 62925181 62925180 62925431 62925181 62925180 62925431 251 ACTTTTCTTTCGCTGTGTGGCTTGAG-----TTTAGCATTATGAAAGTAGTTGCTATGGGAGAGTTGGCTGTATTTACCGGATCATGACAAACAGCAACAGCTGAAAGACAAATATGGTGCTCTGTTTTAAGTATAAGGTGGGACGAGAGCCAGAGATCAGCAGCTTCAGATTGTAGCAGGCCACAAAGCTGAATCCTAGAATCTTGATGTGCACTGTAGTTACTCAG---GCTTAATAT--TTAAA-------TTTAGCTTATACTT ......:...:x:..x:x..xx..:.-----...x:.x..x.x.x...:.......x.::...:.:xx....--...:x..x..x.:.....:..::.........................x.....xx..x.::.---x...x.:.:.....x:.:.x.....:..x::x:::.xxx:x:.....:.xx.xx.::x...:.x:..x:xx...:...:.x.x.x...---....:.x..--.....-------...:x..:...... 26M5D41M2I63M3I88M3D9M2D5M7D14M 161/246 65.4% 251/94230402 0.0% 22/246 8.9% 122642632 67571923 +3159 chr4 + 190214555 185572943 185572942 185573040 98 TTTCTTAAATAATTTTATAATGAAGACAAGCT--CTTAAGATAATTTTATTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTAGAGACAGTGTCTTGCTCT chr4 + 94230402 32310601 32310600 32310700 32310601 32310600 32310700 100 TTTCTCAAACGATTCCAGGGTAGCAATGAATTGGTTTCCTTTGATTCTATTTTTTTTTCCCTCCATTTTTCTTTTTCTTTTGGAGACATTTTTTTTTTCT .....:...::...::.x::.::x:.::.::.--:..xxxx.:...:.......:...::..::x.....:.....:....:......x.x.:..x:... 32M2I66M 61/98 62.2% 100/94230402 0.0% 2/98 2.0% 153262342 36952213 +3270 chr4 + 190214555 185582167 185582166 185582249 83 CGCAGTGGCTTTTACCTGTAATCCCAGCTACTTGGGAGGTTGAGGCAGGAGAATCGCTTGAACCTTGGAGTCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:......--.x:..x....:.:...........::...:....x.xx.x...x.:........:x.:..::xx:..:..:.. 8M2D73M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 109548970 80665585 +36912 chr4 + 190214555 185585496 185585495 185587755 2260 GATAAATGTCAAGAAGAAAAACTGAAGTATACTTCCAAGCAAAATTTATTAGATGTCTATTCAAGAAAAA---CACAATGACCTTT-GCTTGTAAGAATTCAAAGTCAATTACCTGGAAGCCAGGTATGAATAG--TTTTTTCTTTTAAAATCAGATACAGAGAGTAGAAACAGTAATTTTTCTTAAATATGACAGGCAACAGATATTGAAGTCTTTTCTCATAAATGGCATCAAAGAGAATTATTCATTTATCAGCAAAGCTGCATGCAGTTGACTTAATTTCAAACCTGAAGCCTTTAAAATATGAAGCTG--GTTATGAACTTGACAGAAATCAAGGTAGGCTACTCAACGATGTTTCTTTACCTTCTTCCTAATGAAATTCCCTTGTCATCAGTCAGTAGATATGTACATTTC-ATTTGGCTTCTA--CGATCTTTTAACTTCATAGATTTTTGCATAAA-TGCTATCTGACAGAATCACACTATCTAGGGGTGCTTGTGATCTGTGAGATAAGGAGAGGCTAGTCTGCTGAAA-GTGTTGTC-----GCAGGATAAAGACCAAATTAGGAAACGCCCCTGTTTTC---TCAACAACTAG-----TCTGTACAAAAAAAGAGCAAACATATGTACAAAATTCTA--GAGGCTACGTACATTGTGAAAAGATCAATATCACTGTCCATGAAAGAGATGCCATAAAAAGTTTT---ATCTGTAAGGTGCTCAAGATCCAAAGATGAACAGTTCTTATGCAAAGTCATAAGAAATACAAAGCTAGTTTTCGGAGCAGGTGTAATTCAGGCACTGTGAACCATATTAAACCTTCCAGGTCCCAATATCATTTTTTAAATTTCTGCTTCAGGGCAGAAAATAAAACCTGAATGATTTAACATTGCTTCTAAAAAGTGCCTAATTTATTCCTAGGAAATATTTTACACACACCAGGAAAATCAGGCTCAACATATTCCTGTCCTCAAATGTAGCCAGGATTCTGAGTTCCATAGAAGAAAAATAATTATTATAGTAAAAATAATTGTAGTAATCCTAATCCTTGCTAAAACCAACTTTAATACTTGTGATGCTTCT----GTACTCTATTTCTATAAAATAATGTGTGAGATTCTATTACATTTCCATAAAATGTACAACATATCATATGGATTATATGTTCTCATACAATCTCAAATGTGTATGTGTACACACAGTGAAATCTTACCTACTAGTAT----TGCTTACAGATACTTT-CAGGTGTCT--GTTAGAATAA-----TTCTTTGCACCTCTCACTAACACTGCTTTTACTTACATTTTTTCA----------GATAAATAAAA-CACTAAGAGCTCATTGTTCATGATGCTGATCATTACA---TTTTAATATAAAATAGCGATGCAACTTTACAACA-CAATAGTTTTCCCCTGTA---GCCTAGCTCAGCCTCTTGTATTGTCATGA----TTATTACCGAAGGCTTTTATTTACTTACTGTTTGCACTTCTAAAAAATGCAAACAAATTGC-----------------AGAAAAAGACTCCTATTTGAAAACTCACATT---CAATCAGCAAAATCACACTCATCCAAATTAACTCGCCTCCTCTTGCTTTAAAGGTTGTAATCACTGTGCATA--TTACAACATGTATGTGCAGGCAAACAATAGCTAAAGTACAGTTACAGTTGTCATATTGTGTAAACCAAGACACTAGGCAAACTTGTGA-------------AAAGAATACACACTGCCAAGCGAA---GAATATGAAAATGCAAACCACAGC------------------------ATTCCCCAATA------AACAATTTTCTGGTCGT--------CTTGGGGGAGAA-----------CATCGCCTGGGGGGAGATGTTGAAATGGAGCCACGAGGCTGGACAGCCTCCTGGAGACACTTTTTTTTTTTTTTTTTGCCTCAAATATTTGACCATTTTTAAATATCATGATTTTTTT----CTTTCTGATCCCACATTT----TGACGTGTCAAA--------GCTTAGAGCAGGAAGTAGGAATCCACACTTTCACGGAGGGGGA------------CCAGCCTGCCATGTCGTCCCCAGGCTCACAGCAGCGGCGGCTACTCTGCTGGTGGTTTGGT--GGCAGGTGGAGATGG--TGACGGCGCATTGGA--------------AACCGTAAGGCATGACAACGGGAGGCCCGCGGGGTGT---TTCAGGCGCGTTGACGCAGGTGCATGGCTGGCAGGCGGCCTCTACAGAAGGAGGGAGCGCAATTCACAGCCTCTTGACGTAGTTTCCGGGGAAAGTACCAAAGAATTTGGTTCTTCTTGAGGTCCCTGAAAATAGAAGCGAGTCATGAAAGGGGG-----GTGACAACGATATCAGT-TCATACACATGGGCTTGAAT chr4 + 94230402 62931893 62931892 62934063 62931893 62931892 62934063 2171 GAGAAATGACGGGGAAAACACTTG---TGTACT-CCAAGCAAAATTTATTAGAAGTCTATTCAAGAAAAAAACCACAGAGACCTTTTGCTTGTAGGAATTCAAAGTCAGTTACCTGAAAGCCAGGTATGAAAAACCTGTATTTTTCTAAAATCAGGTACAGAG--TAGAAACAGTACTTTTT---AAATATCACAGGCAACAGATATTTAAGTCTTCAATCATAAATGGCATCAAAGATAGGAATTAATCTCACAGCAAAGCTGCATGCAG---ATCTAGTTTAAAATTGAAAGCCTTTGAAATATAAAGCTTTTGCCATTAAATCTGCAATAATAAAGGTATGCTGCACAAAGATGTTTCTTTACCTTTGTCTTAATGACATTTC----TCAGTAATAAAGACATATGTACATTTAGATTTGGCTGGTAACCCatattttaa-ttaataaaattttGCATAAAATGCTATCTTACAGAATTGCACTATTCAGATGTGCTTATGGTAAATAGAGCAAGTAAAGCAAAATGCATTGAAATGTTCTGTATGTAAAGAGGGCGAAGATCAAATAAGAAACTTAATTTTTTTTTAAATCGACAACCAAATGGCTCTGTACAAAAAA---GCAAACATATGTACAAAATGCTACAGAGACTAAATACATGTTGATAATTTCAGT-CCTTTACCCATGA--GAAATGCAGTAGAAGCTTTTGCCATCTATAAGGTGCCAAAGA---------AAACAAATCTGACTTGGAG-----AAAAAAAAAAATCAATTTTTT--------TTTCATAAAGTCGTAGTCA-------TGATCATCCTGTGCCTTAATTTCGTATGCTA--TTTATGCTT----ACAG-------------------------TTGCATATGGAGAATGTCTGTTTTC--------AAATACTTGATTCAT-TCAGGAAAAAAAACCCCAA---------ACCCTC-------------------------------------------------TAAAACGTATTG---------------------------ATTTTAATACTTGTGATTTTTTTTAATGGACTAAATTCCTAAAAAAAGA-GTGTGTAACTC----AGGTTTTGTTAACat-----acatat-atgtg---tgtgtgt----------------gtatatgtatgtatacatAGTGAAATAA-----ATCAGTACATGATACTTGTGAATGTTTTTCAGGTGGCTATGTTAGAGGAAAAAAGTCCTTTGCAC-------TAACACTG--TTTACTTGCTGCTTCTTAAAATGCCTGTGGTACATAAAAACACTAACCTCTCAGATTTCATGCTGCTGACTATTACAACATTTTGATT----ACAACCATTTAATGTCATATGATCAGCAGGTTGTTATTGTCTATGCTTATGTCAATGTCT-GTCTCTTCTTTAAATCCTGTTTCCCAAGGTTTTA-------TACCTCTTGCACTTCTTACCTTTGAACAGAAAATGCTGTAGCTTTAATAGGGGGGAAAAAGG-----GTTTAGCAAATACCATTGCACCATCAGAACACTTGCAGTTCTTCCATTT---TTCACTACGCTTGCTTGAGATTTTACAGTCACTGTGCATAAGTTACAACATACAAGTGCAGGCAAAAAAC--CTATATTATAATT-----TGTCAT----TGTAAACCAGTACAATAGGCAAACCTGTGATACAGCAAAGTGAAAGCAACAAATGCTGCCACGCTAATAAGAATGTGGAAACTCAAAACACCtttttttttttcttttttctttttttcttcttAAATAGTAAGCAGCAACTTTCCCTCTGTTGAACATGCATGCTGAAAAATCATGTTTTCCCATCGC----------ATTTCATGGTAGTACCACAAAT-------GTCACAAACAGGAAGCTTCTCCCTCTCCTTGCACCTC----------CCCCCCCCTACTGTAGCAATTCTTCTGGGTACCTCTCATCTGGCTTTTCCTATTGCGTTTCAAATAAAAAGAGTTAAAAGCAGGGAGTA----------CTTATATGTAGGGAGAATTCCTCTTGTTTCAGAAAGCTTAGTTATTC------TCACGGTAGTCGTTGCTGTAATACTGCTGGAACGGTTTGGCAGATGG-GATGGGATGAGGATGAACTGGATGGCCTCTATTTGAGACTGCAAG-CAAGAAAACAGAAGGCCAGCGTAGCATGTTTTCTAGCAGCTTTATGCAGATATGTTGCAGAGATGCAGCATAAATAA---GAATGAAAAAAATTCACAGCCTCTTGACATAGTTTCCAGGGAAAGTACCAAAGAATTTGGTTCTTCTTGAAGTTCCTGAAATTAGAAGCAATAGATGAAAGATGGCAATAAGAACAGGAAAATCACTATTGTAAGCATGGCCtttaat ..x.....x.::.:.:..x.x:..---.:....-...................x................---....:x.......-.......:.............:.......:..............x.:--.x.x..:..:.........:.......--...........x.....---......x................x.......:xx...................x.:xx...x..:.xx..................---.::..:...x...::x:........:......:.....x--.::..x..x.:x:..:x...x......x...:.x...x................:x..:......x...:.----...x:.:.x.:x.x............x-........xx..--.x..x......-..x...:.x...........-........x.......::......::..:x......:..:.xx:.:::::...x.:..xxx.:.x:::.....-..x:...x-----:x...:::....:.....x..:..x:xxx::.x....:---..:.....:.:-----.............---...................x...--...:...x:.....xx...x..xx...:.-:.x:.::......--..:....x:..:..:x....---....:........:x....---------:....:x...x.:x:::..-----.:...x.x...x.x.x....:--------.x.x..xx..x.::x..x.-------.:.x.x.:.::x.:.::...x..:.x.x:..--...x.....----:...-------------------------....x.x.::.:.:..:..:x...x--------.....:..x.:x..:-:........xx.:x.:...---------::....-------------------------------------------------.....xxx....---------------------------.:...............x:..:.----.x...xx...:...x....x:.-.....x:.:..----.x:...:xx...x..-----......-..:..---.:.:...----------------:.:.:.:.:....:...:........xx-----.::....:----.:...::::..::...-......x..--......:x..-----.:........-------........--.......:.xx:..:.:.----------.:..x......-......xxx....xxx......x......::......---....:..x----.:.:.x..x:..:x.:.:.xx.-..::..x..x::x:...x---..:..xx...::x...-..x.:x..x.x.----:.:..x..x....:...x-------...:x:..........x.xxxx..x.x.x...x...-----------------:.......:-----:...::x..x.xx....---.x.....x.x.x.::..x.:x.:.x.x..---.:xx..x.x.......x.:.xx..::.:............--.........::.x...........x..:--...x.x..:.:..-----......----.........:x...x.........:.....-------------..:x..:.x.::......x..x..---....:..:...:x....x...xx:------------------------x...::x....------.:...:....:xx::..--------.x..xx.:.:..-----------......----------..x.::x::.:.x:....:.:x-------.:.x.xx:x..:x.x:..:.:::.:.::..x::....----------..x:::::x.x.:.x:::...:..:.----x::...x...:x:.x...----.x:...x.....--------.:.x.:......:....----------...x:.:.x....:..------------:...xxx..:xx..::.:.------....:.:..:x.:x...::xx.:...x...xx:...--.....:...-.....--...x.::.x.:....--------------:..:.:...-..x..x...:.:.....x...x:.::.---...x:..:xx..x.:....:.:::.x..x.:x.x..:..x.xx.:.:---..:x..:x:x..................:........:................................:..:.......x.......:.xxx.......:x..-----:x:...:x:.x....x.-.::..x:.....x...x... 24M3D6M1D36M3I13M1I47M2I27M2D17M3D86M3D39M2I71M4D27M1I12M2I11M1D20M1I73M1I8M5I38M3I11M5I13M3D23M2I29M1D13M2D20M3I19M9D19M5D21M8D19M7D31M2D9M4D4M25D25M8D15M1D19M9D6M49D12M27D23M4I22M1D11M4D15M5D6M1D5M3D7M16D28M5D8M4I16M1I9M2I10M5I10M7D8M2D18M10I11M1I37M3I8M4D22M1I18M3I16M1D12M4I18M7D36M17I9M5D17M3I29M3D40M2I28M2D13M5D6M4D30M13I24M3I24M24I11M6I17M8I12M11I6M10D22M7D37M10D26M4I18M4I12M8I17M10D16M12I19M6D36M2I9M1D5M2I15M14I9M1D27M3I47M3D105M5I17M1I20M 1381/1960 70.5% 2171/94230402 0.0% 511/1960 26.1% 122653603 67560952 +9936 chr4 + 190214555 185589673 185589672 185589816 144 ACATACCCACAAACCAGCCGTCATCACACTTTTCCATGACATCAATGACATCACTTTCTCTGAGCTCCAGCTCATCTTCATTCCTGGGAGTATAGTTATACAGAGCCTGAAACCTTAAACAGGACAAGGGAATGTGTTTAAAAA chr4 + 94230402 62934768 62934767 62934910 62934768 62934767 62934910 143 ACATACCCACAAACCATCCATCATCACATTTTTCCATCACATCAATGACATCTCCCTCTCTCAGCTCCAATTCATCTTCGTTCCTAGGAGTATAGTTATATAGAGCCTGAAACCTTAAATAGGACAAATG-TTGCATTTTAAAA ................x..:........:........x..............x.::.....x.......::........:.....:..............:..................:.......:x.-x..::...x.... 130M1D13M 123/143 86.0% 143/94230402 0.0% 1/143 0.7% 122654905 67559650 +7936 chr4 + 190214555 185593861 185593860 185594050 190 TTTAGAAGATAAGAAGAATACTTACGGTTCCCCCCCACCTTGAATATTTTCATGAGTAAACACAGGACGCTGTGGCTGAAATGAAATGATTTTCAATGTAATCAATGTTTAAACTGGTACTAATTAAAAGATAATTTGGATAATGGCATGGTAC---TTTTCTTGACATTTAATATTTCCTGTTGTAAAAAAC chr4 + 94230402 62937365 62937364 62937552 62937365 62937364 62937552 188 TTTAGTAGACAAGAAGTATACTTACGGTTCCCCCCCACTGTGTATGTTTTCATGAGCAAGCACAGGGCGCTGTGGCTGAAATGAAATGATTTGAAATGTAATAAGGATTTA---TAGTCTAAGATCCAAG--TAGTTGGATAGGCATATGATGCATAGTTGCTTGAGCTTTCATATTCTACTTTGCTTAAAAC .....x...:......x.....................:x..x..:..........:..:......:.........................xx........x.:x:....---.:..x:x.:x.xx...--x.x.......:xx::...:.:.---x..x.....xx...x.....::x:x...:xx..... 111M3D16M2D22M3I36M 139/185 75.1% 188/94230402 0.0% 8/185 4.3% 122656496 67558059 +8180 chr4 + 190214555 185599941 185599940 185600084 144 ACCCTACCCTGTGGGAACCGCTGAGCCCTCTGACAGGTGAGCCGCAGAATCTCCTAGACATCACTGGGCTACGAGGAGGCTTACCCAGGACACATATCTCGCTTTTTACGTCAGCCTGGAAAATGTACAAGAAGTTAGTTAGCT chr4 + 94230402 62940900 62940899 62941043 62940900 62940899 62941043 144 ACCATACCCTGTGTGAATAGCTGTGACCTCTGACAGGGGAGCTGCAGGACCTCTTAGTCATCACAGGGCTACGAGGAGGTTTACCCATAACAAATATCTCTCTCTTTAAATTAGCCTAGAAAAACCACAAAAAATGTGTCAATT ...x.........x...:x....x.x...........x....:....:.:...:...x......x..............:.......x:...x.......x..:....x:.:.....:.....xx:....:..:.xx..:.::. 144M 111/144 77.1% 144/94230402 0.0% 0/144 0.0% 122659041 67555514 +6709 chr4 + 190214555 185604293 185604292 185604565 273 TAATTAAGCTCATTGAAGACATGCAATAAACCACACTCAAGA--TGCAGTTACCTTTAATTTTGGTGGATTGATCTCCTGTTGATAAGAATATTTAGGGAGGAGAGGAGGTGAGCAGGGC---------TGAGAAAGTGTAGAGTCCAGGTCAGAAACAGAGGCGAAGAGAGAATGAAATGGAGGGGAGGAAAGCAGGTGGCTGGGAAAGGGTGTGGG----TGCTTGCTCTCCCGAAGAAAATGACGGAGGCTTAAATATCGAGGAAAGACGAGAGGTGATTATGCT chr4 + 94230402 62943936 62943935 62944216 62943936 62943935 62944216 281 TAATTA---TTAGTGAAGATTTTCAACAACCCATGCTTGAGAAGTGCAGTTACCTTTACCTTCAGTGACTCTTTCTCCTGCTCATGTAAGAGTTTAGAAAGGAGAGGAGGTGAGAGGGAAGCAGAAGAGTGGGATGTTGTACAAACAGAGTGAGAAGCTGGAGTACTGGCAGAGTGAAATGGTAGATTTGAATGAAGG----TGGAAAGGAGTATCAGACTCTTCTGATGTTTTCGTAGAAAGCAGAGCTGTCTTAAACAGTTAAAAAAGATGACAAGTAATTATGCT ......---.:.x......:x.x...:..x...::..::...--..............x:..::...:x.:xx.......:.x..:x:.:x:.....::...............x:..:x---------..:..x:x....x.:x.x::..x....:.x.::.::xx.:x...:........x:.:xxx...x.x...----...:..:.:..:.x:.----.x..x::x:.::..x.....::::x.xx.x......:.x:x.::.....:..x.:..:........ 6M3D33M2I76M9I69M4D16M4I66M 169/266 63.5% 281/94230402 0.0% 22/266 8.3% 122660357 67554198 +16322 chr4 + 190214555 185611773 185611772 185612016 244 TTCTTACCTTATTTGAGCTCAAGCTGTGAATCCTATCACTAGAATAGCTGTGGGGTATTGGAGGGTCAGGGTAGTCCTCAGCACCTTTTG---TGTTCTTCTTGACGACCTCCACATAGGAAACAGGGAAGATGCCTTGTCTGTTGGTTCCTGGGATTTTACCTTCATACCAGTTTTGATCAACTCTTTTAAGAAGAATAACTCTATCTCCCTGTTATGAATATGAGAAAAATGCATTAGAAACAGA chr4 + 94230402 62949456 62949455 62949700 62949456 62949455 62949700 245 TCCTTACCTTAGTTGAACTTAAATTGTGTATTCTGTCACTAGAATAGCTTTGGGGTATAGGAGGATCAGGGTAGTCATCAGCACTTTTTGATGCGTTCTTTTTGATAACTTCTACATAGGAAACAGGGAAGATGCCTTGTCTGTTGGTTCCTGGTATTTTACCTTCATACCAGTTTTGATCAACTCGCTTAAGAAGAACAACTCTGTCTCCCTGGAATG--CATTATAAAAATGGGTTATCAGCAGA .:.........x....:..:..::....x..:..:..............x........x.....:...........x.......:.....---:......:....::..:..:.........................................x...............................x:..........:......:........xx...--:..x.x.......x:...xx.:.... 90M3I126M2D26M 207/242 85.5% 245/94230402 0.0% 5/242 2.1% 122662317 67552238 +17598 chr4 + 190214555 185614828 185614827 185615180 353 TACCTTTCTCAGTGACAGCTCCACATTTGTGTCTGCGTTGAAGTTGTATTTGGCTATAGCTTCTCCGATTTCTCCGGGCTGGGCTGGCGGAGGTGGTCTTGCAGGCTGTGCTTTCTCAGGAGGTGTGAGTTTCTATGAAGGAAATAGTCATTTATTCTCAA--ATCTGCG-GTGACCTTTGAAACCACCGCC-------ATCCAAGAGAGAAAGGGAGAGGACCTACCTCTACGTATGAGATCGGGAAGATGCCCACTCTCCCGTGGTGTTCTCCCTCATACCAATTTTGATCAATTTTCCTGAGGATGTAGACAGTATCTCCTTTCTTAAATGACAACTCCCTGGAAGAGACACGTTGACAT chr4 + 94230402 62951538 62951537 62951900 62951538 62951537 62951900 363 TACCTTTCTAAGTGATAACTCCACGTTTGTGTCTGCACTGAAATTATATTTGGCAATAGCTTCTCCAATCTCTCCAATCTGTGCAGGAGGAGGCGGCCTGGCAGGCTGTGCTTTTTCTGGAGGAGAAAGCTTCTAGGGAGAAAAATACCAACAGATTTTAATCATTTGCATGTAGCTTGTGGATCTGTTACATGAAATAATTCAAGGAATTAAAACAGAGAACAAACCTCAACATAAGAAATTGGGAAAATTCCAACTCTTCCATGGTGCTCACCTTCATACCAGTTTTGATCAATTTTCCTGAGGATATAGACAGTATCTCCTTTCTTAAAGGACAGCTCTCTGTAACAGATTCATTTAAAT .........x.....:.:......:...........::....:..:........x...........:..:.....::x...x..x..x.....:..:..x..............:..x.....x.x:..:.....x.:..:...xx::..x:x:x.:.:..--..:...:-..::.:.x..:.x.:::::.x-------..:....::.xx..::x....:..xx.....x..:..x..:..:.....:..x..x.....:..:.....:..x..:........:.......................:.......................x....:...:...x..x...:x.:..x.x.. 161M2I7M1I21M7I164M 263/353 74.5% 363/94230402 0.0% 10/353 2.8% 122663290 67551265 +5113 chr4 + 190214555 185618578 185618577 185618658 81 TACTTACTTAGATGTCTGAGCCTTAAAATCATAAACAGCTTTTGCAGGCAATTTCTGAAAAGGAAGATAAACAATTAGCAC chr4 + 94230402 62953175 62953174 62953255 62953175 62953174 62953255 81 TACTTACTTAGAAGTTTGAGCTTTAAAGTCATATACAGCTTTAGCTGGCAGTTTCTGAAAAGTAGGCAAAATGATTAACAC ............x..:.....:.....:.....x........x..x....:...........x.:.xx...::....:... 81M 66/81 81.5% 81/94230402 0.0% 0/81 0.0% 122665403 67549152 +5445 chr4 + 190214555 185620055 185620054 185620161 107 TTAACTACCTCTTTTTCTGGAGTTCCTCTTCTTTCCCTTGGTGCACTTCTCCCCATGTCAGTCAAAGTGGATGAGTAACTTCTAGGGGACTCACGGTCTATTGGAAA chr4 + 94230402 62954969 62954968 62955072 62954969 62954968 62955072 104 TTTGCTACCTCTTTATCTGGAGTTCCTCTTCTGTCCCTTGGAGTACATCGTCCCACATCAGTGAAAGCA---GAATAGTTTCCAGGAGTTTCCTGGTCTACTGAAAA ..x:..........x.................x........x.:..x..x:....::.....x....::---..:..::...:...:.x:..x:......:..:... 69M3D35M 79/104 76.0% 104/94230402 0.0% 3/104 2.9% 122665086 67549469 +96463 chr4 + 190214555 185622845 185622844 185624618 1774 AATGGAAAATGAAAGAGCTGGAGGGTGGGTCTCTGAACCACAAGGAAAAAGAAAGAAAAGCTCATCCACCTTGGA------GTGCACCGCCACGGTCTTGGTGGTGGCAGCTGCTGTTGGCTGTGTCCACGTCTTGGAAAGAGGCACTGCGGGGCATTCTCCCGCAGTCATTCTGGTAGGGTGGACAATGAATAGCACCATCGGGAGGCAGTGGGTGGAGAGGCTGGTGCAGGGGGCTCCTCCTCAGCGCTCTCAGGGATGAGTTCCTCTCGGGAACATCTGGCAGCAGCTCACTGATGAGGCGGTGCAGGATGCTGTTGTCCGGCAAGCTCCCCCTTTTCTTTTCAGCTTTAATTTGGTCACAGATGTCTTTAAGGGCAGAGTCCAGAGCCTCAAACACAGATGCTTTACATTTTGCCTTTTCAGTCTGTTTCTTAGGAGCCGAATTTTTTTTCCTCCGGAAAGGCACAGGACTGACTAGAAAAGCAAGTTTAGAAAGGCCAGGGTCCATTTCTTGCCTTCTGGGCTCCTCGGTGTTTTCGTGTCTGGCTCTTTCGTGTTTTAACATTGTGGTAAATCGAGTGTAGGAGGCCGGGCACCTGCCTTTGCAGGAGCTGATGAGGTGGCGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGCTGGATCCGTAAAAGCTTTCGGAGGATGTGAAGGAAAAGTGATCAAAGTCACTTTCACTGCAGAAGGATGACCCCTCTAGGTGAATGTAGTCACTGTGGTCGGACACAACCCCGTCCTGGTCGCTGTCGGAAAACTCCACGTGTGCTCGGGGCTGCTCATCGCTGGTGACTTCAATGTGAATGGGCACCAGGGCGTTAGACTGGCAGCCTCGCCGGCCCCGAGCGGGGGGGCCGCTTTGATTTTCTTCCTCCAGCAAATACTCAATGGAAAACCGCCTCTTGGGACATAGGCCATTTTGCGGTGGTTCTAGGGTTACGGGAGACAGCATGTCATCCCCTAAATTTGGCATGGATTTGGACTTCTGGATCAGCTTTTCGAATTCGGAGATGCGTGTGGGCACCATGTCCCGGGGCACCTCCTCCGTGGAGCACTGGCTCCAGGCGCGCAGCAGGTCCTTGTGCTGCTGCTCGCTCTCGTACTGCAGAATCCTGGACTTCACGGAGCAGATCACCTCGGAGTTCATCAGGTCCTTGCGGTTGATGCGGTGCATTTTCTTGTACATCTTCAGGAACCCCGGGGCGTTGCGGGCTGACCTGTGTCTGATCCTTGATCTGCCGTTACTGCGAACCTCCGGGACGTAGGGGGACCCCCACGCCATGGGGCAGCTCTCCTTGGAGTCCTCCTCACATAACAGGGAGCCCATGCTTTCCGACTTGACTTTCGGGTCCGGGAAGCTATCGCAGTCGTCGTTTAGGAGATCGTCACAGCTCCGGGATTTGATTTTGGGAGAGACGGTTTCTTCCGTGCTGCTCCAGATTTCTGCGTTTTGCCGGGCCATTTGCCAGCCGTTCTTGAAACTAATGGCTCTTGGTGAGTCCCGAGGGACATCCAAGTGCTGTCTGTAAGTGCTACAGTAATCTAACTCACTGGAGGGGTTGCCGTTGAGCCCTGAGTAACTGCAAAGGGATGGACATATTTTGCTATCATCCCCACCTTT-TAATCC--AGAGCAGCGTGGTAGAAGAGAGACATTTGGAGAAGTTAAAAGGTTCACAAAGAGAGGAGAGCATGTCAGTAAAGCATCAGACAGCATAGCAAGGAGAAAGCAGTTAGTGTGTTT chr4 + 94230402 62957223 62957222 62958990 62957223 62957222 62958990 1768 AATGGAATGAGAAAGGGTGGGAAATACAGGGAATAAATCACAAGGAGAGAGGAAGAAA-GTGAATCCACCTTGGAAACACAGTGCACTATCATTTTCTTGGTTAT------TGTTGTTAGTTGTGTCCATGTCTTGAAGAGAGGCACTAAGAGGTAATCTTCCACAATCATTCTGGTAAAGTGGGCAATGAGTAGCACCATCTTGAGGCAGTGGATGAAAAGGCTGGTGCATGGGACTCTTTTTCAGAGCTGTAAGGGATGAATTCCTTTCTGGAATGTCTGGAAGCAGCTCAGTAATAAGTCTGTGTAATATACTGTTGTCAGGCAAGCTTCCCCTTCTTTTTTCAGCTTTAATTTGGTCACAGATGTCTTTAAGTGCAGAATCTAGTGCTTCAAAGACAGATGACTTGCGTTTTGTCTTTTCAGTTTGTTTTTTAGGGGCTGCACTTTTTTTCCTTCGGAAAGGCACTGGGCTGACTAGGAATGCTATCTTGGAGAGGCCAGATTCTGCCTCCTGCCTCCTTGGATCTTCAGCAGGTTCTTGTTTAGCCCTTTCATGTTTCAACATGGTGGTGAAGCGGGTGTAGGACGCTGGGCATCTCCCTTTGCAGGAGCTGATGAGATGCCTgtggtggtggtgatgg---tggtggtggtgatggCCCGATCCATAAAAGCTTTCAGATGATGTGAAGGAATAGTGATCAAAGTCACTTTCACTACAAAAGGATGACCCCTCTATCTGGATAAAGTCACTGAGGTCAGAAACCACTCCATCTTGATCACTGTCTGAGAAATCCATATGTGACCGTTGTGGCTCATCACTGGTCACTTCAATATGAATTGGCACCAGGGTTTTAGATTTGTAGCTCCGTTGTACCTGAGAGGGATGTCTGACTTCATTTTCTTCCTCCAGCAGGGACTCGATAGAAAATCGCCGCTGTGAACATAAACCATTCTTAGGAGGCTCTAGTGTAATGTTTGACAACATTTCATCACCTAGATTTGGCATTGATTTTGACTTCTGAATTAGTTTTTCAAATTCTGATATTCTGGTTGGCACCATGTCTCTGGGCACCTCTTCAGTAGAAGACTCTCTCCAGCCCTGAAGAATACCTTTA---TTCTGTTCTTTTTCATACTGCAGTATTCTGGACTTCACAGAACAGATCACCTCAGAGTTCATCAAGTCCTTGCGATTGATGCGATGCATCTTTTTGTACATTTTAAGGAAACCTGGGGCATCATGTGCAGATCTGTGACGAACTCTTGCTCTACCACCACCACGGCCCTCAGGGGCATATGGGGATGCCCAATTCATTGAGCAAACCTCTTTGGCGTCCTCCTCACATAGAAGAGAGCCCATGCTTTCAGACTTGGCCTGTGCATCGGGAAAGCTATCCCGATCATCTGTTAAAAGATCATCACAGCTACGAGATTTTCTCTTTGGAGAAGTTGTTTCTTCTGTGCTGCTCCAGACTTCTGCATTTTGTCGAGTCATTTGCCAGCCATTCTTGTAGCTGATTGCCCTTCTTGAATCATTAGGAACAGCTAAATGTTGTCTGTAAGTGCTACAGTAATCTAATTCATTTGAGGTGTTGTGGTTGTGCACTGAATAACTGAGGAGGGATGGATATACTTTGCTAATATCCCCACCTTTATAATCCATAGAGCAGCATGATAAAAGAGAGACATTGCCAGAAATTAAAAGATTCAGAAAG-TTGGAATTAATATCAGT-AAGTATCAGAAAGACTAGAAAAGAGACAGCCATTAGTGCATCT .......x:x.....:.:x...::xxx:.xxxx.:..:........:.:..:......-.:xx............------......:::..:xx.......x:.------..:....:.:........:......:.:.........:x.:..:.x...:..:..:...........::....:......:..........xx..........:..:.:...........x...:...:.::....x...x.x........:.....:..x....::.....x.........x.:..:..x.x...:.:x..:........x........:......:.:...................................x.....:..:..x..:.....x.......x:..:.:.....:.........:.....:.....:..:.x.:..........:...........x..:........:..x..x.x:..:..:.......:x..::::..:.....:..x..x..:..:.::xx...x...:.:..:.....:.....:.....x.....:..x..:........x..:.....:..x....................:..x.x............:...---...........:....:x.....:...........:..x............x......................:..:................xx..:..:x........x....:..x..x..:..:..:..:..:.....x..:..x....::....x:..xx.:x.......:.....x........:.....x..........:x.....:.x.:...::..::.xx..:...x...:x.x.:.x:..x.................::x....:..:.....:....x..xx.:.....::.....:.xx..x..:.....x..x.:.xxx....:...x.....x....:.........x.....x........:..:..:.....:.....x..x..x.xx..x...........:.x.........:..x..:..:x...xx......x.x:.x..x.x::.:..:---.x...:..x:.:..:........x..:...........:..:...........:..........:.........:........:.....:..:........:..x.....x..:.....:.:::.x..x..:.....x.x:.::....x...:..:::..::..:x....x...:.:..x.....:x....xx:...x.:...:x:...:....x..............:x..:..............x......:.:.x:.x:..x..:........x.::..:..xx...::.....:........x..:.....xx.:..x.....:::x........:.............:......:.....:..:.:............:......x.:..:..x..:...xx...:..x:x...:...x.:..:..:..........................:...:.x....x....:x....x..x....:......x::.........:...:.......x:............-......--........:..:..:............xxx....:.......:....x....-xx...:xxx..:.....-...:......x..xx...x..:....x...x:......::.:. 58M1D16M6I24M6D533M3D474M3D536M1I6M2I52M1D17M1D43M 1345/1759 76.5% 1768/94230402 0.0% 24/1759 1.4% 122665622 67548933 +9437 chr4 + 190214555 185626827 185626826 185627028 202 CTCACCTTTTGCTCTTGATGGGGAAGAAGGAGAAGAGCTAGTGAAAGACTTTGTAAGAGTGGTGCTTGATCCTGGGAGGTCCACTCGGCCTGGGCTAGTCCTGCTCGCACTTTGATCTCC-CAAGCCCCGTGGTGGACCCACTGCAGGCTCGCTCTTCCTCCGCTTCCTGAAGTCACTGGCCATGCTTGCAGAACTGAAAGAA chr4 + 94230402 62961168 62961167 62961369 62961168 62961167 62961369 202 CTTACCTTTTGCTCGTGATGGAGAAGAAGGAGACGAGCTAGTTAAAGGCTTTCTAAGGGTGGTGTAGGGGCCTTGCATATCTGTACGGCCCGGGCTGGGCCTGTTTGCATTCTGATCACTGTGTGCTCTCTGAT-GACTTACAGCAGGTTCTGACTTCCTCCTTTTCCTGTAGTCACTTGCAGTACTTGCAGAACTATAAAAA ..:...........x......:...........x........x....:....x....:......:xx.:x...x.x.x:..:::x.....:.....:.x....:.:...:.:.....x.:-::x..:.:x..:.-...::..x.....:..xxx........x:......x.......x..x:.:...........:x..:.. 120M1I13M1D68M 147/201 73.1% 202/94230402 0.0% 2/201 1.0% 122665659 67548896 +14029 chr4 + 190214555 185635280 185635279 185635673 394 AAACACAGATGTGCAGAATCACAGTCACAGCCTCTAAGGGAGATATCTGAAAAAGAGAGAATAACGTGTTTTTACCTCATTGAAAACACCAGAAGAATGATCTTGAACATAGTCCAGAGGCTTTTTAGGAGGCTGGGTGTAGACGCACCACAGAAGCAGAAGTGTAGGGATGGAATGGAGGAGAGTCAATGGCAGCAAGGAATGAACATGTGGAAAAGGTGACAACAGTTAGAAATTGAGTGTTGACAGCACCAGCTACACAAACAGAATGACATGAATGGAGCAAAATGGGGGCAGCTGGGAGGAAGTGTGCAACGTCTGCAAATATTCTCAAGCACTGGGAAAATTGGCTAGTGTTCAATTAGTATATTTATAAATTCATTTTGTCAAATTT chr4 + 94230402 62966566 62966565 62966910 62966566 62966565 62966910 345 AGACACAAACAGCAAGCATGCCAATCCTTCTTCCCAAGAGAATCACCTGAACAAGA------ATCATCCATTTACCTCATTGGAAACACCGGAAGAACTGTCTTGAACATAGTCCAAAAGCTTTTTAGGTGGCTG----------CATCATATAAGCAGAAGTGTAGAGATGGAATGGAGGAGAATCAGTGGCAGCAAGGAATGAA-ACGTGAAGAAGGTGAC-ACAGTTAGAAACTAAGTGTTGACAACATCAGGTACA-----AGAGTGACACGTATGG-GTAGAA----------TGGGAGGAAG---------------AACATGTTACAGTATTTTGTAAATTTTTAAGCATCTAAATAATATGTTAGTAACTTTAGGTGGTAAAATTT .:.....:.::xxx..x..xx..:..x:xx:::.:...:..:x:.:.....x....------.x.:.x:x............:.......:......:x:................:.:..........x.....----------..:..:.x..............:................:...:.................-.:...:.:........-...........:.:..........:..:...x....-----...:.....:.x....-.:.:..----------..........---------------..:..x:.xx..:.:.xx.x.....xx:x..::.::..x..:...:..x:...x..:.xx.x..x...... 56M6D73M10D61M1D16M1D36M5D16M1D6M10D10M15D71M 259/345 75.1% 345/94230402 0.0% 49/345 14.2% 122668714 67545841 +13686 chr4 + 190214555 185638000 185637999 185638263 264 ACGTCTACTGATAATTGTATTTTAGAAATC----AAACAGTATACTCC-TAGTTTTCTTATATTAATAGTCTAGCCTCACTTACCGGGCGTCCAAACTCCAGTTCTGAAAAGAATTTATACCAGGGCTCATTTTCTAAATCTATGTCATCTGGATTTATGCGATCAGTCTAGAGCAGATGTGAAGGAAAAGGGAAGGAAAAGG--CACACTGAGCAAAGTGAGGGAAACGCTGTGTGGCATGAAAAACTCACGCGCGCATTGACACGCAAA chr4 + 94230402 62967518 62967517 62967782 62967518 62967517 62967782 265 ATGTTTGCTGAAGTTGGTAATCAGTAAATTTCTAGAAAAGTATTTTCCCTAACATTTAAATATTAATATTCTGTCCTCACTTACCGGACGTCCAAACTCCAGTTCTGAAAAGAACTTATACCAGGGTTCGTTTTCTAAATCTATGTCATCTGGGTTTATGCGATCAGGCTGGAGCAGTTGTGAAGGAAAAGGGAAGGAAAAGGCACACACTGAGCGAAGGGCTAGAAACGTCGGGTCACTTCAACAATACACATGC------AAACGCAAA .:..:.:....x:x.x...x.:x:x....:----:..x.....x:...-..::x..:xx.........x...:x.............:..........................:...........:..:.......................:.............x..:......x.........................--..........:...x.xx:......::.x..x:.x.x..x..:x...::..------.x....... 30M4I14M1I154M2I51M6D9M 206/258 79.8% 265/94230402 0.0% 13/258 5.0% 122670482 67544073 +7633 chr4 + 190214555 185646663 185646662 185646796 134 CTTACTGGTCTTTCATGCTGAAGAATTGATGACTTGCCAGGTTCATATTCAAAAATACTCCTTGGCTCAGACCGAAATTTTCTTGTGTCCACTTTTCTGTCTGGAGGATCCCAGTCATGCCT-AGAAATAAACAA chr4 + 94230402 62973484 62973483 62973618 62973484 62973483 62973618 135 CTTACCGGCCTTTCGTGTTCAAGGATTGATGACTTTCCTGGCTCATACTCAAAAATGCTTCTTGGTTCTGAGCGGAACTTGCGAGTATCTACTTTTCTGTCAGGGGGATCCCAGTCATTTCTAAGTAACAAATAA .....:..:.....:..:.x...:...........x..x..:.....:........:..:.....:..x..x..:..:..x.xx..:..:...........x..:.............x:..-..x..:...:.. 122M1I12M 105/134 78.4% 135/94230402 0.0% 1/134 0.7% 122673179 67541376 +9967 chr4 + 190214555 185649457 185649456 185649682 226 AATGCCTTACTTTTCTGTTGAAGACCGATCTCTTGGTCGAAGCGGCGGGACTGGAGGTGGAACATGTGGGGGAGGCACTGGGGAGGACGCATCCTTAAAGGCATTGGGGCTGTTGTCGGAGTGGCTTTTGGAAAGAGGTCTGTAGGTTTGGGTCTTTGCAGCAGGGTGTGACTGAGCACTGTAGGGTGGGTTGTACAGACCTATCATGACAAAAAACAAAAGCAGA chr4 + 94230402 62976521 62976520 62976738 62976521 62976520 62976738 218 AGTGACTTACTTTTCTGGTATAGACCTTTCCCGCAGACGATGTGGTGGTACTGGGGGTGGCACATGTGGGGGTGGTAAAGGAGATGA---GACCTTAAAGGCATCGGAGCCGCTGTCAGAAGCACTTTTAGACAATGGTCTGTATGTCTGTGTCTTTGCAGCTGGGTGTGCCTGAGCAGAGAAGGATGGACTGTAGCCACCTA-----ATATAAAGCAAAAACAGA .:..x............x.:x.....xx..:.x::.x...x.:..:..x.....:.....x...........x..:.xx..:..x..---:x............:..:..:.:....:..:xx:.....:..x.:x........x..:..x...........x.......x.......xx.x...:...::....xxx.....-----.:.x...:.....:.... 87M3D113M5D18M 161/218 73.9% 218/94230402 0.0% 8/218 3.7% 122672936 67541619 +3200 chr4 + 190214555 185651747 185651746 185651822 76 ATAAAATAGTCATTGCGA-GCAAGGAAACCCATCCTACCTGCATTGTATGTATAAGGAGTATTATACATGTCTGTGT chr4 + 94230402 62975727 62975726 62975803 62975727 62975726 62975803 77 ACAAAATTGCTGTTTTGAAGTGAGGGAATAATTCCTACCAGTACTGTATGAATATGCAGTATTAAACATGTCTGTGT .:.....x.:::..x:..-.::...:..:xxx.......x.:.:......x...x.x.......x............ 18M1I58M 55/76 72.4% 77/94230402 0.0% 1/76 1.3% 122676020 67538535 +5746 chr4 + 190214555 185651747 185651746 185651868 122 ATAAAATAGTCATTGCGA-GCAAGGAAACCCATCCTACCTGCATTGTATGTATAAGGAGTATTATACATGTCTGTGTCATCATCTAGAAAATGAAACATAAATATTATGGTAATATAGATTGT chr4 + 94230402 62977924 62977923 62978046 62977924 62977923 62978046 123 ACAAAATTGCTGTTTTGAAGTGAGGGAATAATTCCTACCAGTACTGTATGAATATGCAGTATTATACATGTCTGTGTCGTCATCTACAAAAAGAAATATACATGTTACAGTAATGCAGTATGT .:.....x.:::..x:..-.::...:..:xxx.......x.:.:......x...x.x.....................:.......x....x....:...x..:...::.....::..xx... 18M1I104M 90/122 73.8% 123/94230402 0.0% 1/122 0.8% 122673823 67540732 +5908 chr4 + 190214555 185652584 185652583 185652756 173 AATCAAACCGATGCAAAAGACGAATGTAGTCCCTTCAACCC---ACAAGGACCTCATCAGAAAGCAGAGCAGCAGACATACCCGGCTTGTGCACCATGTGAATTTGCTTAAACATCGTCTTGTACCAGTCCTTGGGCCGGTCGACTGTCTGTAATGAAGAGAGCGTCCAATGGTTA chr4 + 94230402 62979058 62979057 62979223 62979058 62979057 62979223 166 AATCAAA---ATGCAGAAAA---ATGTACTTTTTAATACCTCTGACAAGTACA----CAGCCAAGACAACAGCATACTTACCAGGCTTATGTACCATATGGATTTGCTTGAACATTGTCTTGTACCAATCCTTTGGCCTGTCAACTGTCTAAATAAAATACAGTTTTTAACAATTA .......---.....:..:.---.....x.:::.xxx...:---.....x..x----...xx.:x.x.:.....x..x....x.....:..:.....:..:........:.....:...........:.....x....x...:.......:x.xx:..x.x..:x.::..:::... 7M3D10M3D18M3I9M4D119M 118/163 72.4% 166/94230402 0.0% 13/163 8.0% 122673526 67541029 +16199 chr4 + 190214555 185656423 185656422 185657605 1183 TTCCAATCTTACCACGGCTTTTTTTTTTTTTTTCCTGCTCTCTTTC-CCATTCTTTGCCTCTATCCCTTATTGTCTTGGCTGCCCAGGTCTGCATTCCAGGGGAGCAGCTCTTGGCCA---CACCCCAGCTTTACATG--GGTCTTGCTGCAAAGTATATG-----CAGCTGCAGTCCCTCCCCGCATGGCCCCCA-----ACTTCACCTGCAAAGGTGTTGTTGCTTTCATCCTG--TCCCCGGCTTCCTTCTC-----CCGGCTGGCACAAGCCTTCTCTTCCAGTGGACTTGGTCAGCCAGCTGCTGCCTGCCCAGGCTCTCAGAAGCTGCCTCTGCTACTGCTGCGTTTTGCCGGAAGGGGCTGCCCAGATACACTGAGC------AATGCTTTGGCAGAGTTTTAAAACTTAAAAAAAAATCCAAACACTTTCACT-TATCATCCCAGGAGAGCTCTCAGCAGGCACGGCTGAAGAGGGACATTAAAATGTGTATTTTTCTTCA-GACAGCTTTTCCTTTCCATGACATTAACTCTCTTC-------ACTCCAATCATCTCACCTCCCAACTCCCAAATCACAGCTTCC---AAT--CTCCCGGTGTTAACACACATCTATTTCAAAAAACGAACACATCACTGCTTTATTCGCAATGCA----TGTGGGAATTCAATG------CAGCCAAAGAATTTCCATTGTCTTGTTCCTTCTCTTTTCTCTCTATTGCCCTAAGCCTCCTTGGTAAAAGGTAAAAGAAAAACAAACAAACAAACA-AACTAAACCACAC-------AACACAGTTTTACCATTTAACAAAATCGCAATGTTCATGATGTTTCATTCAAATGGAAAAA-CAGATTGTGTAATT-CTCTCCCATCAACAGCTTTCTTTCTCTGCCA-CACACAGCATAACATTCATGAGAAGTCGGATGGCACGGAGGGCAATCCTCCTTATATAAGACCCTAGGAATGCACAAAGCC----GTGGACAATCCGTCCTTTGTG-GAGTCTGTGCACAG---CCCCAGACAGACGCACACGCTGGCATTTCCTACCGTTCTAATTGCTGTGGGGATTCCGGATTCATCCACGGGCCCGATCCCTGGGTAATGCGGGGCTTTGATGACTGTCACTCTCTTCTCTTCCTCTGAGGATCGGTACAGGGGGATAGAGCTGCTGGTGG---TGCCATCCAGAGACTGCGCATGCTGGGGATATGTGTCTGTGGAATCTGCACAGA chr4 + 94230402 62982611 62982610 62983784 62982611 62982610 62983784 1174 TCCCCATCTTACCACTCATTCTGAATTTCTCCTATTGCTTTTTTCCATCAGTTCCTGCTCTTCCCCCTAATTTTT-----------------CAATCCACTGAAGCAATTCCAGGCGATTTCAACACAGCCCCATAAGTCAGCACTGGCAAAGAGGATATATCCAACAGCTGC--TACATCCTTGCA----CCTCACAAAGACTTCACCTGCAAGGGCTCTGCTGCCTTCATCCTGGCTCCCACTCTTCTTTCTCTCTCTCCGTCTAGCACAGCACTGCT--TCCAGCAGGGAAGGCCAGTAAGC-ACTTCCTCTACAGACCCAGAACAGCTGCCACTGTGCTCTCTG-GACCAGCCAGAAGAGGCTGCCCTGACA-GCGGAGTGGAAAGAATGCTTCAGCAGAG--------------GGAAAA--CAAACCTTCTCAGTCTGACATCCCAGGCCA-CTCGAGCCAGG---GACTAGTGGCAGATGATCGGAACTGGGCTAGTCTCAATGAAGGGGTTTCCACACTATGCGCTTACATGTCATCCAGGGGCACAGCAATCGTGT-ATTGCACATCTGCAAAAATACTACTCACTTAGATTACTGACTGAATGAAACTACACTACTCTGATCAAGTGAGCAC--CACTGCTCC--CCAAAATGCAGGAGTGTGAGATTTatatgtgtatacatacacaga---tacacatgcatacttgtacacatgcataaatacagtacgtatacaCTTTATTTTAAG----------AATAACAAAGCAAATACAATTATTTCACATCTCCAAAAGGGAAGGAATACAAGAGAAGAGAGACAAAATTTTGATTAGTTCTAATTAAACCAGAAACATCAAGTTGCCCAATTACGTTCCCATCAGCA-TTCTCCTTTTCTGTCAACACACAATATTATATTCATGAGCTGCCTGATTGCGCACACAGTATTCCACATTATATAAGAGTAGAAGAATGTGAAAAACCCATTACCAACAATCAATTCATTGTATGAGTTCATACGCAGATTCCCCAGA-----------------ATTTCCTACCGTTCTAATTGCTGTAGGGATTCCAGATTCATCCACTGGGCCAATCCCTGCATAATGTGGAGCTTTAATGACTGTAATTTTTTTTTCTTCCTCTAAGGATTTACAGATTGGTATTGTACTGGTGGTGGTGCTGCTGCCAACGGTCTGAACATGTTGCGAGTATGTCTCTGTGGACTCTGTAAAGA .:..x..........xxx..:.xxx...:.::.x:....:.:..:.-:..x.:::...:::.x:....x...x.:-----------------..x....xx.:....::..:x...x.---..x.x....:::.:.x.--:.:x:..x::x.:..x....:-----.......--.x.x...::...----..:..-----.............:..:x:..:...:.........--....xxx....:.....-----...x..:.....:xx..x..--.....::.:xxx..:...:x...-:..x...x:x...:.:.xx.:x.......x...:xx::x...-.x::x...:....:........x..:.-:.x...:------.......::......--------------::....--.....x:.:...x.-.:x.........xx.-...xx:x....---.:..::x.:x:..::x.x::.xx..x::.xx...:x.-..x:.xx.....x:x.:...xxx...xx.x..x..-------..xx.....:.x.-.::x.x..x..x.x...x:..x:..:x.---:..--..xx.x.x:.x..xx:...::xx.:.x.xx..::..:...--.......::--:.:x......----....:..x..xx...------..xx..x...---.x..:xxx.x.::.:x.x.x.x.x:x.xxx..:x.:x.xx.xx.x.:..:x.xx...----------..:..xx..:....:.-..:..xx:....:-------.:x:x..xxx...x.xxx..x.:.:x.:x...x..x..x.xx.:.x...x..x::....x.-..::...:x:....-.x:........:..-:.:..:..:....:..-......::..x.:.........xx.:.x...x..:.:x.x:.:.x...x.x..........x:xx.:.....::x...:..----::x:......x:.:.x....:-....:::.:.:...---.......-----------------........................:........:...........x..x..:.......x:.....:..:.....:........x.:.:.:..:.........:.....:x::.x.xx..x..x.x:...x......---...:::.x.x:.x...x:....:..x.::.....x........x....:.x... 46M1I28M17D26M3I17M2I21M5I7M2D12M4D5M5I35M2I17M5I20M2D23M1D42M1D27M1D7M6I15M14D6M2D14M1I15M1D11M3D37M1I35M7I13M1D28M3I3M2I40M2D9M2D10M4I15M6I10M3D57M10D16M1I13M7I61M1I14M1I14M1D16M1I81M4I21M1I14M3I7M17D137M3I54M 709/1099 64.5% 1174/94230402 0.0% 159/1099 14.5% 122673812 67540743 +29154 chr4 + 190214555 185665689 185665688 185666419 731 CCTTTCAAGGAAACGGTGGAGGCAAAGAAAGGCAGAATAATTACAT---GAGTGGCCGCAGGGGTGGTTAAGGTGGTGCCATCTGTCACAGCAGACCTCTGACCCCAGGTGGGGGAGGGTGTCTCAGAACGGCCAGTGGTGTCAGAGTCACCAATCTGCAGCTCCTCCAGCATGGCTGTGGAGGACTCACTCTCCGAGCGGGAGGAGTGCTCGGCCAGGGAGGAGTCTGTTGTCAGAGAGCCTGTGTCGTGGCTGTGGATGAGGCTTTCTGGAGCTGGGAGCAGGTGTTTGTATAAGCAATGGGAAAGGCTCTGGGGATTATGCAGGCGTGAAGACCCCACACCATCGGGGGGCGGAAGGCTGAGTGATGCTGAGCTGGTGCCACTGCCTGGTGAGAAAGTGGCTCGGTTCAAAGGTACCACGGAAGGAGGGC---ACGGAGGAGAAGCTTCTGGTGTGGTTTGTCTGTGTGTCTGTGAAGCATTTACCTCCAACACACTGGCAGGTAAGTTCTGATTTCCAAGCTGAG-TATGAGGAAAAAATAATAAGAGATAA----ATTATCCAATTAACAAAAGTACCTCTTTTTGC---------GATGTGGCAGAGAAGGCAAAGCATCGGTTTTATTTGCAAGCA-CTTTAAGGAGTT-ACATTCAGATGGGTTAGG-----TGCCAACCACACAGTGCAGAAAAAGTGTGAAAACAGGAAGAAAGTGAATCCAGTCGGTGTGTTTTGAAACAAGGCCGG chr4 + 94230402 62989891 62989890 62990632 62989891 62989890 62990632 742 CCTGTGAACAAAATGGAGCAGG-AAAAAAAGGAAGGATAATTACATTGGAAGTGGCAGCAGTGTTGGTTAAGGTGGTGCCATCTGACACAGCAGACATCTGGCTCAAGGTTGGGGAAGGTGTTTCAGAGCAGTCAGTAGTATCATAGCTACAACTCTGCAGCTCATCTAGAATGGCTGTGGAGGACTCACTCATTGTGCGGGAGGAACACTCACTCATGGCAGAATCTGTGCTTACAGAGGCTGTTTCGTTCTTGTGGATAGTATTTTCAGATGCTAGGAATGGGCATTTATATGAAAATTGTGAAAGGGCTGGGGTTTTATAAAAGCGTGAAAA------ATCATCAAGCGTTGGCAAAGAATATGGTACTAGATGGGTGCCACTGTCTGGTGAGAAAGAGGCTCTGTTAACTGGTACCACAGGAGGAGGAAGAGGCAGTGGAGAAGCTTCTGTTGCTGTTTGTCTGTGTGTCTGTGAAGCATTTACCTCCATCACGGGGGCAGTTACTTTCTGGTTTCCAAGCTGAGATTTGAAGAAAAAAAAATAAGAAAGAAACAGATTACCAAATGAGTAAAAATTTTTCCCTTTGCCTGTTGCTGGGTGTAGGAGAATTACAAAAGCGT--------TTTTCCAGCAGCCCTAGGAAGTTCACATTCACATGGATTAGGAAATAGATCAACCACACTCTACAT-TAAAGTATGAAAACATGAAAGAAATTAATGTATCAAATACTACTGGAAGCAATGCCAG ...x.x..x:...:..x.x...-...:.....x..:..........---:......x....x.x.....................x..........x....:.:.x....x.....:.....:.....:.:.:....:..:...x..::..x.x..........x..:..x.....................x::.x.........:::...:x:..x..x:..:.....xx.:.x....x....x....xx:.......::x::....x.:x...:...:::..::...:...:.:x.x..x......x::x...xx....:x.:.......:.------.:....::.x.x:..x.::xx:x:..:.:..::::x..........:............x.....x...x.xx........:.:......:x---:.:.x.............x..:x..................................x...:xx.....x..xx.....:.............-.x...:.......x.......:.x..----....:.x...x.::....:.x::..::.....---------.:...:.x...:xx:xx.....:.--------...x.x....-.::..:.:....-.......x....:.....-----x::.........xx.:..x-x.....:........x...::..:.x...x:.x:x::.::xx:.x...:...x...:. 22M1D23M3I286M6D92M3I93M1I26M4I32M9I24M8D10M1I12M1I18M5I19M1D58M 518/715 72.4% 742/94230402 0.0% 43/715 6.0% 122675798 67538757 +21183 chr4 + 190214555 185676896 185676895 185678568 1673 ACTAAGAAAGCATTAGGTC--------ATATAAGAAGCCCAAACCAAAGGAGTTAGGGTCTCTACGATACGCATGTATTAATACGAAGAGACTGAGAAGCTTAAGGTACCACTCTGCAGTCTGAGGACTGAGAGGCCGCTGCAACTGCAGATTTTTGTCTCTCTTGCTGAAGAGGTATCTTTGCAGTCTCTGGAGAAAGCTCAGGTAGCTGTTTGTGGCTTTCAAGATCC------TGTCCTGAAAGGGGAGCTATCTGAATGGAAAGAGATGCTGTGTGTGTCTCAGGCACTGGATTAGGGGTCAGTGAGCGGGGCCTTTTGAGAAATGACGGTACTTCGACAGATTTGGAGAACTGTGGAGTACTAATGGGGCTGCTACTTCCTAGATCCTGGTTATGGGTTAGTTTCAAGGTAGAAATCCTCCGAGTTTGAGAATCTTGCCTGTAGTCCTCTTGTAGAACTGGGGTGTTGATGTTAGCGAATGGTGCAGGATCCGTGCTGGAAGCTGCTGGTAGTGGATTAGTGATTTTTTGTGTATATGACATGGTTGTGTTAGATTCTTCAGAATATACAATTGTCTGTCTCGAATCTTCATTGGAATACATAGTTCCCTGAAGAGGTTTTTTGTTAGCAAAGTACTCTGTACTGGAGGGAATTTGTGTGT-----TAGTTACTAACTGGTCTAAAATGACACCCTTTGTGTGACTGGTTATCAAAGAGCTATGAAAGCTCTCTTTTCTTTCTGGTGGAGGGGGTGCCTGGATTGACAATGGGATCCAGAGAAAG--AAATAAAGTTGAAAGAAAAACAGA--GAAAGTCCAAGTTAGTCATGAAAGAAACC--AGTGTCAACCTTGCCTTTACAGAAGTAAAGCAATGCC-ACACCTTCT------GATTATGCTATCCATT-----------------------------TTGTTAGCTAGATTGAG-TGATCATTTTCAT----------------TCCATTT----AGAATGCAC----------------------TTATGTTTATTAT------------CAATGTTTGCCCTTGGGGAAA---AAAGTGTTG----CCAGAGAATACATTATAACATTTGCTCCAT----------------CTAC-ATTCAGGGAAATTATGTTAAAAGTGAACATATGT----TCTCTTGGCATATTTTATTAGACT-TTGACATATATATATATAGTTTA--TTTAATAGCATTGTTTTATAACAATTTTCATGCTTGTGGCACAA-----TTTTACTAATAT----CTCCAACACAGAGC----------CCTTTTAGTTAATATAATAGTTGCATACTCATAGTTATTGAATACATAATGTATTGCTGACCTCATCAGTTTAAATCCAAAGCATCAG-----CTGTCAGCTTTTAAAGAATTAGAATATATCCTAGAGA--------TTATGTTAAAAACCGACATACTTTGATAAGCTTAATCAGAAACAAAACCAAACCAAACCCTTGTTTGTTAAAATTTGTTCTCCATGTTGTAAATACAAACC------TGGCAAGCAAACTAAATACA------------AAAGCAAAA-------ACATATTAAAAATAAAACGTATTGAA--ATACGCACA-----------------TTAGGAAAGAGGCTGTAAGCAGTGGTCTAATAATCATGC-----------CTTAAAATAATGCA-------------------GTAGCCAAGAGTGTGCAGGGTTACCTGAGTTGGTGATCTTTTATCTTGTAGGTTTGGTCGAACGCTTCTAAAACCTTTTGCTGCAAGAGAGGAATATGTAGCATCTCCGTTCAGTGTCTCCTGATTGCCATCATTGTAAGATCTCCAAGCTTTCATTAAGGGAAAACAAT chr4 + 94230402 62997337 62997336 62999200 62997337 62997336 62999200 1864 ACCCAGAAAACAGAAGGTCTAACTTTGATAATGTAAGTATAACTAAAGAGAGTTAAGTGATTCATGA-----ATGATCTAAAATAAA-AGATGGAAAAATTAAATATACCACATGGCATTCTGCAGCCTGTGAAGAAGGAAGAACTGTAGACTTTTGTCCCACATCCTTTGAAGACATCTTTGAAGTGTCTGGAGAAATACTAGGTGGATGCTCTTGGGTTTCAGGCTCTGCATTATTGTCAGGGATGGGAGCTATCTGAATGGAAAGAGATGCTGTGTGCATCTCAGCCATGGGGTTACAGGCAGGTGAGACAGGCCTTTGTGAAAATATAGGCACTTCAACAGGCTTGGGCTGTTGCTGTATGTTACAGTGAACACTACTTGCCGATTCTTGTGTCCGGGTTAATTTAAGGGTAGATACTCTCCGCTTTTGAGACTTCTGCATTTGGCCTTGATGGAGA---GTAGCACTAATACCAGCTACTGTGCTTGTGCCTACACTGGAGATAGTGGTCAGTGGTCTAGTGATTGTTTGTACATAGGACACATTTGTGTTAGATATCTGAGAAGACATTATCTTCTGGGCAGACTTCTCATTAGTGTA-ATAGCC-------------------------AGTA-TCTGTA--GGAAGGTGTTTATCTGGCTCAGTTGTTACTGTCTGG---AGATTAATTCCATTCTTGTGATTAGTTACTCTTGCTTTCCGAAAGCTTTCTTTTCTAGGGGGTGGCAGAGGTGCCTTAATTGCCAAAATCATCCACACACAGCAAAATAACATTGAAGAAGAAACAGAAAGAAAGTAAAAGTTAG-CAGGAGATATACTGTAGTTTGAATTCTATCTTTAAATAAAGAAACTAAGACCTAAGGCTTTTACTCAAGATTGTTCAATACAATGGAAAACAGACAACTCAGTTTTCCCACCGTCCTTTACTGCAGAGGGCTGAACAATTTTATCTAGAAAACTAGATGTTCCATTTGCTCAGAGTAAACAGGAATCAGACCCCAGAAAAGAGTCTGTCTTTTCTTTAAAAAAATCACAATTATTACACTGAATAAAATTAAAACTGTGGAACTCTTCATGATACTTTCCAAAATGTACTGCATGATTTTAGTTGACAACCTATTATTCACAGGTAATACACATAAATACAACACACAGAGCGCCTCTTAAAGCTCTCAATTAAAATAGTAACAGAAACAGAACTGATATGGGTTTGTTGGCTCTTTTTTGAACAGATTAATATATTTGCACATTAAGTGCCTTCTAATCATATTGTTCTGCAAAACA-AGCAGAAATATTATCTTATAATTGAAAAAAC--CTCTATCCTCCAATATCCTGA-TAACCAGTGGATTTTT--TTTTTTTAGTGTAAAACTG--GTATTGGTGCTACTGT-ATTGTTTGAAGTATGGGAATAC-TCCTAGAAAGTTTTAATTTGTGT------ATGACACatatatatatattta--tatatagaaaacatatatatatatatatatat-atatTTAGCTGTCTGTCTTGTTCATTGAAAGCAATTGCTGGCAATTAACCTATAGTCATGCATCCTGTGGAGAGTATACTTTATTTACACAGTAAAAA-AGTTTGTAATGACCCATACGAACAAGTGATTCACACTATCTTGAAGAAAAAACTTTCCCACAGGGATATCCCATCTATATGTGGCGTCCAACCCAGAATAACACACACACAAATGCTAAAGAATGAAATCTGGTATGTTCAGTTTTACCTGAGTTGGTGATTTTTTGTCCTGTAGGTTTGGCCGCACACTTCTAAAACCTTTTGCTGTAAGAGATGAACTGCTAATGTCTCCATTCAGCGTCTCTCTGCTTCCATCATTGTAAGATCTCCAAGCTTTTGTGAGGAAAAAAGAAT ..:x.....:..xx.....--------...xx:x...:x:..x:x..::......:.xxx.::.:..-----...xx:...x.::..-...:x..:..::.x..x:......x:x...x....x:.x...x..:.xx.xx:x.....:...:.......:.x.x.x..xx::..::.......x...x..........xx::....:.x..:.:x...x.....:.x..:------.xx:.x.::.x.................................::......x..:x..:...x:..:x:.....xx:.......xx::....:xx..:.....:....::....:xx::..:x.x:.::..xx.x.:x::......x.:::x..:..xx.x:......:...x.:......x.::.....xx.......x.::...x.x.:.:.:.xx..x...---.x:.:::.:..:::...x.x..xxx:x.x::.::::.....:::x.:x.x:.....x:........x.....::...x....::x...........x::.x....x.:.:x..:x....xx:x..x.::.....:.x:..-....::-------------------------....-......--...:..x:...:.x..x-----.x......:x....---.:.x.:.:x..x..:x.....:.:....::xxx.xx:.x:.......:........xxxx.....x:.:.......x:....x...x:xx.....x.x.x..--......x:.....::.:.......--......xx.......-..x..:.x.x..:--...x.x..:::.::.....x.x..:x...x:..x:..-.x:x...:.------....:.x.x..x..x.-----------------------------.:x..x:..:x.xx.:.-...x..x...:..----------------.......----...:.:x..----------------------x.x...:.x..x.------------....xx..:.x..x::x:...---...x...x.----.:xx.x:....x..x:..x..x.:..x...----------------...:-.....x:.:x.x..:::xx...xxx....:.::x----:.....::x::x:.:x....:.x.-x.:...x.x.:.x.xx.::.x.:--...:x.:..x:.x....:x.xx:...xx:..::...::xxx:..-----..:..x.x....----..x...x...-...----------:...x..:..:.x.x..:--:.x:..x...xx.xx.x:...-..xx:.:..x...x:.--::.:x.:...x....x.::--.:..::.-----....-.x:x...:...x..x:.....:-.......:.--------..:...------x:....:.:x.xx...x::...--:.x.x.x.....xx.xx:.x.:x:x.:.x.:.-.x.x..x.:.x..::.x....xx..xx...x.------......x:..x...x.xx..------------.:..:.x.x-------...:.x......-.:xx:...x...x--.....x...-----------------.x.:....:.:x:.x:xx:...x.:.x.xx:.x::..::-----------.::.:.....::..-------------------.x.::.x:.x:...x...xx.................:....:..:...........:..x..:...................:......x...:xxx..:::.....:.....:.....::x::.x..........................::.x.:.::....x... 19M8I40M5D15M1D142M6I225M3D140M1D6M25D4M1D6M2D17M5I14M3D102M2I24M2I15M1D13M2I37M1I9M6I16M29I17M1I13M16I7M4I9M22I13M12I21M3I9M4I30M16I4M1I34M4I24M1I23M2I44M5I12M4I10M1D3M10I18M2D21M1D16M2D19M2D7M5I4M1D22M1D9M8I6M6D22M2D32M1D32M6I20M12I9M7I12M1D13M2I9M17I39M11I14M19I170M 1023/1611 63.5% 1864/94230402 0.0% 315/1611 19.6% 122679559 67534996 +3009 chr4 + 190214555 185682998 185682997 185683044 47 CAAGACCCACCCGTCTCAAAAAAAAAAAAAAAGAAAAGAAAAGAAAA chr4 + 94230402 45799595 45799594 45799641 45799595 45799594 45799641 47 CAGAACTCACCACCCTCAAGAAAGAACAAAAAGAAAAGAAAAGAAAA ..::..:....xx:.....:...:..x.................... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 139883403 50331152 +10341 chr4 + 190214555 185684711 185684710 185684960 250 AAGCCATTCAAGTGCGACATTGTGTGAGTTAGTGATATTATACCTGCAGCCAATAGGTTTGGAGAACTTTGCACTCTCTTCACAGATGTTAGCGTAACAGACATGGCGGCACGTTTGCGAGCACACCCACCGCTATCTGGAAGCAAAAAAATGATATAGCAG--AGGCCAAGGCAACGGGAA-AAGCACGTGCAATATCATGCGTTTTAAGAGAAATGTGCCAGACATCCATGAGAA-AGATGAACAGTTAGAA chr4 + 94230402 63002256 63002255 63002501 63002256 63002255 63002501 246 AAGCCGTTCATGAGCAGTATCTTACT-GTTAGT--TGTTATACCTGAAGCCAGTAGGTTTGGAGAGCTCTGAACCCTCTTCACAGCTGTTAATGTGACAGACATTGCAGCACGTTTGCGAGCACACCCGCCGCTATCTGGAAGC-ACAAAACAATACAGACACCAGCCCCAGACAAAGGAAGCAAGCACATGCAACACATCACAGT----GTGAGATACGCCAAACATACAAGAAAATAAACATGCAATTAGAA .....:....x.x..:::..:x.::x-......--.:.........x.....:............:..:..x..:..........x.....::..:........x..:....................:...............-.x....::...:..xx:--..x..x..:...x..:.:-......:.....:.:xx::.:x.----.x..:..::....:....x..x..:..-.:.::x:..:...... 26M1D6M2D109M1D17M2I18M1I23M4D27M1I16M 181/242 74.8% 246/94230402 0.0% 12/242 5.0% 122682455 67532100 +5297 chr4 + 190214555 185690542 185690541 185690804 263 AAAACTAACAGA--CAGCATACCTGTGTTCATTTTCACCTTGGAGAGTTTGTTATTAAAGTCTTCAGTTTTCCTGT-AGGAAAAAAATGGTGCA-TAATT------GTTCACTAGCATGTGGAAGAAAATATCATGAAAGTGTGTCGCATTTTTGTTTTTGATGTACCTGTAAGTTAATATCACATTATCATTAGTCTTATTTAAATCAGTGTTTAATAAGGTAGGAAGAATTTATAATTCTGTTCATGTTAAACTTTAATTATTGGTCCCAT chr4 + 94230402 63009191 63009190 63009446 63009191 63009190 63009446 256 AAGTCTCACAGAAGCAGCATACCTGTGTTCATTTTGACACTGGTGGATTTGCTATAAAAGTCTTCGGATTTCCTGCGAAGAATAAAATGATCTATTAATTTGTACAGGACATGAATATGTGGCACAAA-----ATGGCAGCACGAC---------TTCTCAGGGAAGTGGAGAATCAACGTGATATAAACAACAGTCCTATTTTAATGTGGCTTTAATTAAATTGGTACTGTTT---GTTCTTCCAAAGTTAAAGATGAGCTGCTGCTTCCAT ..:x..x.....--.....................x..x:...x.::....:...x.........:.x.......:-.:...x......:.x:.-.....------.xx..:x.::......x.x...-----...:x..:::.x.---------..:.:::x.x.x:x.x:.:.:..::.x.:..x.x..x:....:.....x...xx.xx......x.::.x..x.xx:...---:....x::x.x......xx.x.::.::..x.:.... 12M2I62M1I17M1I5M6I22M5D13M9D79M3D36M 163/246 66.3% 256/94230402 0.0% 27/246 11.0% 122681351 67533204 +3672 chr4 + 190214555 185705415 185705414 185705488 74 GCGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCGAGAAAGTGGAAGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:...........::........x.xx.x...x.:........x....:x.xx::.:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 109672211 80542344 +3026 chr4 + 190214555 185721059 185721058 185721113 55 CCTAACTCCTGCTTTCCCACCTATTCTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 + 94230402 50566929 50566928 50566983 50566929 50566928 50566983 55 CCAGATTTCTGCTTTTGTATTTATGCTCTTTTTTTTTTTTTTTTTTTCGGTACAG ..x:.:.:.......:x:.::...x..:...................:.:x.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 135154130 55060425 +3912 chr4 + 190214555 185731816 185731815 185731901 86 CTGCCTGTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA-TATATATATA-TATATAT chr4 + 94230402 4618339 4618338 4618426 4618339 4618338 4618426 88 CTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT ...::.x...:...:x.x.::.x.......::..............x:..x.::......x.x......-....x.....-....... 69M1I10M1I7M 66/86 76.7% 88/94230402 0.0% 2/86 2.3% 181113477 9101078 +4012 chr4 + 190214555 185731817 185731816 185731907 91 TGCCTGTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATA-TATATATATATATATATAT chr4 + 94230402 4618336 4618335 4618426 4618336 4618335 4618426 91 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATAT-TATATAT ..x....:.:...:.:.:x:x.::.x.......::..............x:x...::......x.x......-....x......-....... 72M1I11M1D7M 68/90 75.6% 91/94230402 0.0% 2/90 2.2% 181113481 9101074 +3226 chr4 + 190214555 185731821 185731820 185731905 85 TGTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 4618336 4618335 4618419 4618336 4618335 4618419 84 TGGCTGTTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATAT-AGTATAGATATAT ..x..x.:.:.:.:...:x:x.::.x.......::............x.::x...::......x.x.....-x:....x...... 71M1D13M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% 181113485 9101070 +4187 chr4 + 190214555 185731823 185731822 185731911 89 TCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATA-TATATATATA-TATATATATATATGT chr4 + 94230402 4618344 4618343 4618433 4618344 4618343 4618433 90 TTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATATATTATATAT-TATATGT .:...:....x:x.::.x.......::..............x:....::......x.x......-....x.....-.......-....... 64M1I10M1I7M1D7M 71/88 80.7% 90/94230402 0.0% 3/88 3.4% 181113479 9101076 +3880 chr4 + 190214555 185731825 185731824 185731909 85 TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATA-TATATAT chr4 + 94230402 4618342 4618341 4618426 4618342 4618341 4618426 85 TTTTTCTTTCTTGTGCCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATA-GTATAGATATATTATATAT .:.:.......:x:x.::.x.......::..............::x...::......x.x......-:....x.....-....... 66M1D11M1I7M 64/84 76.2% 85/94230402 0.0% 2/84 2.4% 181113483 9101072 +3090 chr4 + 190214555 185731837 185731836 185731907 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATAT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.x.x...:.:....:.:.:.:::.:.:x.x..x...:..x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 124900307 65314248 +3438 chr4 + 190214555 185731839 185731838 185731915 77 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATAT-GTCTGT chr4 + 94230402 60831530 60831529 60831607 60831530 60831529 60831607 78 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGT ...x.....x.............x.x.x.....:.:....:.:.:.:::.:.:x.x..x...:..x.....-...... 71M1I6M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% 124900309 65314246 +3378 chr4 + 190214555 185731841 185731840 185731911 71 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATGT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............x.x.......:.:....:.:.:.:::.:.:x.x..x...:..x...:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 124900311 65314244 +3367 chr4 + 190214555 185731843 185731842 185731914 72 TCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATGTCTG chr4 + 94230402 60831530 60831529 60831601 60831530 60831529 60831601 72 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATG ...x.....x.............x.:.......:.:....:.:.:.:::.:.:x.x..x...:..x.:.x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 124900313 65314242 +3370 chr4 + 190214555 185731845 185731844 185731915 71 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATGTCTGT chr4 + 94230402 60831530 60831529 60831600 60831530 60831529 60831600 71 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATAT ...x.....x.............:.:.......:.:....:.:.:.:::.:.:x.x..x...:..x.x.:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 124900315 65314240 +3140 chr4 + 190214555 185731847 185731846 185731915 69 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATGTCTGT chr4 + 94230402 60831530 60831529 60831598 60831530 60831529 60831598 69 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTAT ...x.....x...........x.:.:.......:.:....:.:.:.:::.:.:x.x..x...::.:.:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 124900317 65314238 +9461 chr4 + 190214555 185738429 185738428 185739089 661 AACAGAAAAAACAAGACATGCTGTGTGGTTTTGCAACCGGGCAAGTTTCGAAATATTTTTAAGCTTTCTACTTTGCCAAGTATTTCATAAAAAAACTATTTTCTTTTTGTTTCGTGCCAAAAAATGTCACCCCTAAATATTTTTTCCCATATCTGGTCAC-ATGTCCAGGATTTTTTCTTTTCTAAGAATAAATAATTTTTCTGGGTTATAAAAATTCCACTTGCTCTATCAGAT-TAAACATATCTTTATATAGAAAAAGCATCCGAAACATTCCC------CAAGTGGGTCTAAGGGAGGAGTCTTAAT----ACAATTTTGTTAAATTAATTTTGATTAAATAT--------TAGGCCTTGAATTCTTTTTGTGACTCTCACAAAGTTCAGGCTTATTTTGTTACACTTTCAAGTCTCCCTTTTTTTCACTCTCCACATACTGTTTCCTTTTATTAGAAAGCATTCAAGAAGAATTGATTGGTGTGTTTGA---CCAAAA----TAATATGTTGGAAGTGATACCAGTGCAAGGGGACCCTCTGGGTTCCATTCTCTATTTGCATAGTTAGCTGGAGTTAGAAGGTTCAGCTGTCAGGGATTCAAGAACTCTAGCATC---AAAAAAGTGTGAA----CTTGCAAATGAGCTGTCAAGGTTCATAGCAAGTGAATAATGCAGCTGAGAGCTG chr4 + 94230402 63031702 63031701 63032330 63031702 63031701 63032330 629 AACTGGAAAAGCAGCCTTAACCCTGCATTTTTGTACCAGCGCAAGTTCAGGGATATTTTTATACTTTCTGCTTTGTCAAGCATTTTGTACACACATT-TCTTTTCTTTAATTCATTCCAAGAAG-GTCTACTCCAAATATTTTTT-CCATATCTAGCCACAATAT-----GTTGTTTCTTTTCTAAGAATAAACAGTAATTC-AGTTTACAAAAATGTCAAACTCTTT----GATGTGAACATATCTTTATATAGTAAAAGCATCCAAAGCTGCCTTGTCTGGTATGTAGTAATAAAGGGGCAGCCCTGTTAGGCAGGAACCTATAAAGTCCGATTTCCCTGCATACCTGATCGGTCGTCCAGAAATTCCCAGTAGGA--ACCACAAGATT---ACTTAT---------------------CCTTTGCTTCTCCTTTTACTTATT------TTTAATT-----GTACTAAATGAGAACTCA----TATCTTTGACTCCCAGTACACTTAATACACT--------TGCTTATGCTAAAGAATCCTGATGATACCATATTAAACCTGCATTTTCAGCAGGAGCCAGAGGATTTAGGCCTTAGAGTATTAAAAGTTGTAGCATTTTATGAGATGGGGGAAGAAGCTTGCAAATTAGCCATCAAGTTCAA----AAAAGAATAACAAACCAAGAAGCTG ...x.:....:..:xx:xx:.:x..::x.....:.x.x.x.......:x.::.........x:......:.....:....:....::..x.x.x.:.-.:..:.:...:x...:.x....:..:-...xx.:.:...........-........:.:...-..:.-----:..x...................:.:.xx...-:.x...:......x:..xx:x..:.----...-.:.................x..........:..:.xx:.::------:.x..:.xxx...:..:.x..:.:.:x.----.x:.x::.:.x..:.:x:x...xx:.:x...:--------.x.x..xx:.....::xx.:x..--x:.....::..---:.....---------------------.....x:...x.::.::..x..:.------...x...-----.:.:.x..x:....:.x.----.:.x.....---...:x.----.....:::.--------.:.:x:...x.::.:.:...xxx.:.x....x:.xx.::.....xx.:...x....::...:.:..:..x:x.:..:.xx.:..:.::.x......:---x:.:.x.x.x...----.........x...::.....x.:x.----..:x......::x.x.x:::..... 97M1D26M1D20M1D14M1I4M5D32M1D25M4D3M1I41M6I28M4I32M8I23M2D11M3D6M21D24M6D7M5D18M4D9M3I6M4I9M8D97M3I13M4I25M4D25M 385/595 64.7% 629/94230402 0.0% 100/595 16.8% 122706727 67507828 +3334 chr4 + 190214555 185741331 185741330 185741410 80 TGCATTAGGAACAGAGGTCAGGCCCAAGAGCTGCCCTCTCCTCACTTTTCTTTCTTTCTTTTCTTTTTTTTTTGTTTTTT chr4 + 94230402 14667785 14667784 14667864 14667785 14667784 14667864 80 TGAGCTAGTCACTTAGGTAATGCACAAGTGCTTCTACCTCTTCACCTTTCTTTCTTTCATTTTTTTTGTTTTCTTTTCCT ..x::...xx..xx....x.x..x....x...x.:x:...:....:............x...:....x....:x...::. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 171073546 19141009 +8319 chr4 + 190214555 185743707 185743706 185744125 419 GCCCCTCCTCCTCCTGATTCAGATG----ATTTCTTCCTCCTCTTCCTCCT------------CCTCCTCCTCTTCTGGTTCTTTC--TTCTCCTTCTTCTTCTTATTCCTCTTCCTCCTC-----CTTCTTCCTCTTCTTCTATCTTCTTT-------------CCTCCTCCTCCTCCTTCTATTTTCTTTCCTCCTCCTCCTCCTCTTTCTCCTCCTCCTTCTTCTTCTCCTTCTCCTTCTTCTATTTTCTTTCCTCCTCCTCC------TCTTTCTCCTCCTCCTTCTTCTCCTTCTCCTTCTTCTTCCTCCCCTCCTCCTCCTCCTGTCCCCCTCACCTTTCCCCTTTCCCTCCTCTCCCATTTCCACTTTCTTCCCCTTCTTCCTCCTTCTCCCCCTTCCTTTCCTCCTCCT----CTTCCACTTCCCCCTTTCTCTTCTCCCCCTCCTCCTCCTTTTCC chr4 + 94230402 66682158 66682157 66682616 66682158 66682157 66682616 459 GTCTTTTCTCTTTCC--TTCAAATGCTGCATTTCTTCCTCGTCTTTCTTTTGTTGGCTGGGGCCCTCAACCTCTTTCTCTTGCTTCAGTTTTATTTCAGCTTCTGGAAGCTCTTCCTCTTCTAGCTCTTGTCTCTGTTTTTCTTCCTTATTTTGTTCCACTAGTTCTTTTTGTTCCTCCAGCTGATTTCTTTCCTCTTCCTCCTGACACCATTTCTCAGTCTCGTGTTGCCTCAGTTCTTCCAGCTCTAGCCTctcctgctcctccagcacatttctctgttcctcctccagctccttgtgcttctgctcttcccattcctggtgtttttgctcctct-agctcttgcctcttctgcttctccagttccca--gtgcttccgttcctccagcttctgtctctgttgttcctgttcctggcatttctgctcctccaactcttgtct-ttgttgctcctcctgttcc .:.::.:...:.:.:--....:...----...........x....:..::.------------....xx......::xx..x:...--..:.x:...xx.....x:xxx.........:..-----...x.::..x..:....x:...x...-------------.:.::.x:......xx..:x...........:.......xx:x::x:.:...xx:..:x.x:.x.::.xx:..:.:.xx..x.xx:..:....x.......------.:.:...x:.......:.xx......x.x.....x..::::..x:....xx.x:.::..::..:..-.x..:.:x...:.:.:x.:.....x:..:...--x.x:.:..x...:...xx.....x:.:..x::x.....x:....----:...::..:.:..xx:...:x...-::x:.x........x.... 15M2D8M4I22M12I23M2I33M5I26M13I101M6I66M1D32M2D44M4I24M1D19M 262/413 63.4% 459/94230402 0.0% 52/413 12.6% 119061549 71153006 +3123 chr4 + 190214555 185743787 185743786 185743852 66 TCTTCTTATTCCTCTTCCTCCTCCTTCTTCCTCTTCTTCTATCTTCTTTCCTCCTCCTCCTCCTTC chr4 + 94230402 74397297 74397296 74397362 74397297 74397296 74397362 66 TCTTTTTGTTCTCCTTCCTGCTCATTCTTCCTCTGCTCCTGCCTGCTCCCCTTTTGCTGCATTTTC ....:..:...::......x...x..........x..:..::..x..::...::.x..x.x::... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 111346490 78868065 +3474 chr4 + 190214555 185743969 185743968 185744150 182 CTTCTTCCTCCCCTCC------TCCTCCTCCTGTCCCCCTCACCTTTCC---CCTTTCCCTC----CTCTCCCATTTCCA---CTTTCTTCCCCTTCTTCCTCCTTCTCCCCCTTCCTTTCCTCCTCCTCTTCCACTTCCCCCTTTCTCTTCTCCCCCTCCTCCTCCTTTTCCTCTTCTTC------CTCCTCCTTCCCTTCTC chr4 + 94230402 93982306 93982305 93982506 93982306 93982305 93982506 201 CCTCTTCCCTCCTGCCAGGGGTTCCTTACTCCATCCTCCCTGCTCTTCCAAGCCTCACATTCAAAATACTCTCATTTGAAAGCTTGTCTTCCCCACATCAACCACTATCC---TTTCTGTTGTCTATAGCTCACTTTTACTGCTTTCACATTTCCCCCCCCCCCCCTTTTTTTTCCTCTTCCCTTAACTTCTCCTTCCCTTTTC .:......::..:x..------....:x::.::...:..:::.::....---...:x.x:..----:x...:.....xx.---:.x........x:x.:xx:.x:.x...---..:..x.:x..:x:xx..:x.x:..x.:x.....x.x.:......:..:..:.:....::..:.....------..:...........:.. 16M6I27M3I10M4I14M3I27M3D68M6I17M 113/179 63.1% 201/94230402 0.0% 25/179 14.0% 91761663 NA +3661 chr4 + 190214555 185747851 185747850 185747933 83 CACGGTGGAGGGCGCCGGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....x.x:..:--...:.:...........::........x.xx.x...x.............:..x:xx:..:..:.. 15M2D66M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 109714654 80499901 +3468 chr4 + 190214555 185751173 185751172 185751212 40 AAAAAAAAAAAAAAAAAAAGAGAAAGAGAGAGAAATTCAG chr4 + 94230402 75300457 75300456 75300496 75300457 75300456 75300496 40 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAG .................:.....:................ 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 110450716 79763839 +7024 chr4 + 190214555 185753006 185753005 185753182 177 CTACTAAGATGAAAGACATTCCACAAGGAGGAAACTGATCTCAGAACCAGTGACCACGGCCATGAGGGCTTCGTGG--CTGCTACAGCACGTTAGCCATAAACAATTTCCATCTGAGGAAGTGCATTCAGTGCAGCTGCTGATGCATAGTAAATATTTGATCCTAATTGGACCTAATGA chr4 + 94230402 63040272 63040271 63040446 63040272 63040271 63040446 175 CTACTTAGAAGAAAAACATTTCACAAGAAAAAAA----TCTCTGTGCAGGTTTATTCAACCATGCATGCCTCATGTTTCTACTACAGCACATTACCCACAAACAATTTCTCCATCACTGAATACACTCAATTCATCTACCAGTGCTTAATAAATATTTGAGCCTAATTGAACCTAATGA .....x...x....:.....:......:.::...----....x.x:.x:..xxx:x.::.....x:x..:..:..x--..:.........:...x...:..........:x:x.x.xx:.:.:..:...:.x..x..:.:::...x..:...........x........:......... 34M4D38M2I101M 122/173 70.5% 175/94230402 0.0% 6/173 3.5% 122712734 67501821 +11498 chr4 + 190214555 185772290 185772289 185772652 363 CCTTTATTCTCAGTATACCTTACATTCCCAGCCACAGTACTGAACTTCTCAATGCTTGCAATGTTCCCTTGGAGTATATCAGTTGAGCAGGCGGAAAAAAAATATCTGGA------------AGTTTATTATTTTTCCACCAATATATTTGACACCACCTTTGGAGAGGGAACAAAAGGCATACTGTCAAGCGGATAGACCTGGACAAAATGTTACTGTTTGTTCCTCACGAGCACAGAGGTATATTTAAGCAAAGAAAGGCATTCCACGGCTCTCCCGGGACTTC--CTTCCTTCAGCTGAATTATACCAACATGTTCACACCACTGAGGGCCAGGC--TGCTGGAATTTAAAACGCAGACCTCTATCTGCCAGTGCT chr4 + 94230402 63052601 63052600 63052963 63052601 63052600 63052963 363 CCTTTATTCTTCATACACAGAGAACTACCAATAACAGTGCTAGGCAGCTCCAGACCTAAATTGTTCATTTGAACAATATAATT------------AAATAAATTCTTGTATTTGCATTTTTCATTTTATT--TTTTCTTCCAATGTATTTGACACCACCTTTGGGAAGTGAACAAA-GACACACTGTCAAAAGCAGAAACCTGCACAAAATGTTACTGTTTGTTCCCCATGAATGCAGAGGTATACTTACGCAAGGAAATAAATTCCATTGCTCTCTTGAGATTTCCTCTCCCTTTAGTTGAGTT-TAGTGCCAAGTTCACTCAGCTAAAATTTGGGTTGTGTCAGTATGCCAAATAAAAGTTTCTGTATGTCAGTTCT ..........:x:..:..xxx:x.:.x...::x.....:..:::.xx...x.x:.:.:x.x.....x:...:.xx....x.x.------------...x....x::..x.------------.x......--.....:x.....:...................::..x.......-.:..:........:x.x.x.:.....x......................:..:..:::..........:...x....:....x:x......:x......::.:..:...--..:....:..:...:..-..x::x..x......x.x:..:.::x:::..:--..:::.x..x:x...::x.::::...:.x..:....x.. 83M12D15M12I8M2D44M1D109M2I17M1D32M2I39M 238/347 68.6% 363/94230402 0.0% 32/347 9.2% 122719689 67494866 +3377 chr4 + 190214555 185776771 185776770 185776842 72 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCGGGAGGTGGAGGTTGCGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x......:...........::........x.xx.x...x.:......x..:.:..x.xx:..:..::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 109743565 80470990 +13542 chr4 + 190214555 185810914 185810913 185812292 1379 AAAAGAAGTTTTACTGCCACATACC-TCAGCTGTCCTAGAACTCAATGCAGAGGCTTCGCTTCCTTTCTTTCCTTGGATTCTGAGCCGGGGGAGCACAATGGGGGTCTTGTGCTCTGGGCCAGCAAGGCATGCAG-ATACTCGGAAAGGAGGTGTGAACGGCTTCCAATACCTACACTGTTTGCTTTACAACTACCCCAACTAAATCAAACAGGACACCAAGACACTCAGTCCAGGGTAAGCAAGTACAAAATCCACTGGCTATTATGACCCACATAGAGAACAG----AATTCTTCAATTTAAGTGTGTACATAGCTGTGTTAAG----AGTTAAATAAATCATTTACGAGGCTTAAAAAGAAATGCTTCTCATGTAGTTCTTTTTCATGTAGTTCTCTGAATACAAGTCAAAGTGCAGGTCACGAAAGAATCCATTGTTCACAAGCGAGAAATGTTGTTGGCTGTGAGGACGGTTCAGAACAAGCCATCGTAGTCTGCTCAAACAGTAAATATTGGTTTTAAAACCCCAAAGC-ATATCGGTCATGTTTTTTATCTTCCAATTGCTAGAACCAAAATTCACTGAAACAACTCTATGTCTCTGATACTATTTTCTAGAAATGTGTGTGTATGCGTGTGTGTATGTGTCTGTGTATGTTTGTTTGGTAAATCCAAATCACACAATCAACGTAAATCTTTCAGGCTAAGTTTTGCCC-------CAGTTATTTTTATGCTGTGCTTTCAAAAAGGTCAA-----------AAAAGCTTACCTCTGTCAGTGTACTGGGACGCTCAGGAAGCCCCTTCTCCGCCTCGGCCTCAGCGTGCAGACATATGCCCTGGGAGCCCACAATCTGTTAACAGGAAGCAGGTAAACCCGAGAGCGTCCGCCTGCGTTCCAGTCCAGTGCCCGTCCCAGCACACACCTGCTTTTTCAGACCTGCCGCTCATATGCCACAGCCACGCACAGGACCAGCGTTAGCAGAGTGCAACACCCTCCGTTTGGATCCCTCGTTTTCAGGGTAAGCAGCTAGGGAGCTGCTGAGATAATATTGCAGGGAAAGCTTGCCTTCCCAAGACAAAAACCTTTGCTGCTGCCTGATAGCAGATATGCAGCATTATCACTCTGCATTCCACATTCTCCAATCAGCTAATTGGAACGGCAGTCAACAGCCTGTCCAAAAGGCAGCTTGCAGGCCTGCGTGGCTGTGATCATTGTATACTAACATGCCCATTGCTTCTCTCTTCCCTGAAGAGATGTATAAAAGAGGCTTCTTCCAGGGCGAAGCTCAGCAGAATATGCCACACTGTTTTCCATAAGTAAAATGGCTGGTCCTCTCAG---------CTCTGCTGCAGACAGCTCATTGGGTTCCACTGGCTTTTCGTAGCCATAGCAACAACC chr4 + 94230402 63075014 63075013 63076183 63075014 63075013 63076183 1170 AATAAAAGTTTAACCGCCCTGTGCTGTTAATTGTGCTTGTGCTCCATGTGGAGTGCTGGTTTCCTTCCTTGTACCGAGCACTGAGCGGAGGGA-CACAATGGGCGTGTTGTGCTCCGGGC-AGCACGGTATGTGCCATATCTGAACGGGAGGTGTGAGCTGGCTGTGTCACTGCTGCTCTTACCAGTGCCAGTACCACAAAGCAATCAACCTCAGCACTGGGGCATGCAGCTCACGGAGGGCTGGTGAAAAAGCCGCTCTTTATTATGACCTACATATTGCACAGCAGCAGTCAGACAATCTAA------AGCTAGTTACGCTGAGGCTGAGCACAATGCATCAATTCCAG------------------TCACGAATAATTCAGCGACTTGAGGCTGTTCAAATACGTTTGCAAGTTTG---------ATAACGCATT---------------ATATCCCATGCTATCCTGACAGT-----ACAAAGCACAGTGG---------AAAACGAATACCCCTTTTGA--CTTGACAGCTATATAGAATATGACGCT----------------GAAACAAGATGCAGTCAGACCAACGCA---CTCAGCCATCGCTCCACACAAGTCTCTGT-------------------------------------------CCAAACCACCCCTTAAACACAAAGGTACCTGGCGATGCTTATTTCTCGCGGGCGGTTTTGCTCGGAATACAGTTTCACAAGGCAGAACCGGTCCCCGCAGAGCCGTACCTCTCCCCG-GAACCGGGATGCTCGGCAGCGTCCCTTTGTGC---------GGAGCGCGGCGGCACACCCTcggcgcgca-------------------------gcccgcggg-----gtcggcaggccgggc--ggggccgggTCGGCACCTGCCCGCT----------------------------GCGAACCGCGGGGCCG----------------CCAGCCCCGGCTCAG--CCCTCGC------------------GGCGGACACCGAGATAACGCCGCGGGGCTGCCTCGCCTTTACGAGACAAAAGCCCGCTCGGCTGCCTGACAGCAGATATGCGGCGTTATCGCTCCGCATTCCGC---CTCCGATCAGCCGACGGCAGCAGCAGTCACCGGCTTGTCAAAATGGCAGCTCCAACGC--GCTAACCCGCTGTCATTACTCACTCGCGCGCCCGTTTCTTCTGTGTCCTCGGAGAAGACGCGTG--------TTATTGCACGGCAGAGCCCGGCACACCATGTCACATTGTTTTCCACCGGCAAAATGGCTGGTCCCTTCAGCACCGCCAccgccgccgccgccggcccgcggggctgccccggcTTGCGGGAGCCATGGCAACAgcc ..x.:......x..:...x::.:.:-.:.::...x..x.x:...x...::...xx:.x.:......:...x:x::.:::x......x.:....-.........x..x........:....-....x..:...::x-...:::.:.x:..........:.x.x:.x::x:..:xx::..x..xx.xx.:.x.x....x...xxx......x.xx::...:::.:..:x...::..x..x::..x:..:x....x..:..xx:..........:.....xx.x....----.:.:xxx....:...------.xx...:.::.:.:..----..:xx...:x....x..x.::------------------..x.:x:..:...xx:xx.x..x:.:.x.:::.....:xx.xx....x::---------.x..:x....---------------..:.:x:xx...:.xxx...:..-----....:x..:x..:.---------.x.:::....::xx....:.--.::x.x...-....x.:x:...x:x:.----------------...x...:..x..x.x.:..x.x:x:.---...x.x:.::::.::x:.x..:.x.x...-------------------------------------------.....:...x.xx.x...::...xx.x:.x...x.x.:..xx::.-------.:...x.x:.::x:x.:::x.....x..:.xxx..-----------.:.:x.x.......x:.x.-.x..:....:....:.x.:xx:..:.:.x:..---------:.x.:..:.xx::.::....x..x..x..-------------------------:....x.:.-----.:.x..:xx..:.x.--.x.x...xx:.:....x::..:...----------------------------..x.xx.:.:..:..:----------------x..x..:.x.:.::.--......:------------------..x:.x::.:.......::::..:...xx:x..:.....:x.:........:..:x:x.x.........:...........:..:.....:...:.......:.---....:......::.:x.x.:.:.......x.:..:....x...x.......:xx.x..--..xx:x.:.:x:.....::x:...x:.::....:..x.....x.x.:.:.x..::...:.::.:--------..x..x..x...::...:.:...x.x:...:....:.........:x:.:..............::....---------.x.:..:..x.x.:..:.::x...:.x.x.:.....x:x.x......:......:.. 25M1I67M1D26M1D14M1I149M4I15M6D16M4I21M18D50M9D10M15D23M5D14M9D20M2D9M1I17M16D27M3D29M43D45M7I35M11I19M1D32M9D29M25D9M5D15M2D25M28D16M16D15M2D7M18D104M3D58M2D64M8D70M9I57M 692/1132 61.1% 1170/94230402 0.0% 285/1132 25.2% 122735900 67478655 +3307 chr4 + 190214555 185818690 185818689 185818768 79 GTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x:..--......:...........::........x.xx.x...xx:.x.........:..x:xx:..:..:.. 10M2D67M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 109785489 80429066 +3097 chr4 + 190214555 185827317 185827316 185827460 144 ATCACCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCATCATCATCATCACCATCATCATCATCATCATCATCATC chr4 + 94230402 34908110 34908109 34908253 34908110 34908109 34908253 144 ATTAGTAACACTGTTACTGTTAGCATGTTCATCTTCTCTACTGCTGTCATCAGACTGATCAAAATCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTC ..:.x:.x..:::.:.:::.:.x...xx.....x..x::.::::::......xxx.x....xx......:::x..x.x:..xx:x..x..x..x..x..xx.x:.x..x..x.x.......x...xx...........x..x.. 144M 85/144 59.0% 144/94230402 0.0% 0/144 0.0% 150919207 39295348 +3108 chr4 + 190214555 185827494 185827493 185827637 144 ATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCATCACCATCATCATCATCATCATCATCATC chr4 + 94230402 34908110 34908109 34908253 34908110 34908109 34908253 144 ATTAGTAACACTGTTACTGTTAGCATGTTCATCTTCTCTACTGCTGTCATCAGACTGATCAAAATCATCGCTCTCCTGGTCCATTTCCTCCTCCTCTTCCACCTCTTCCTCTTGATCACCAGCATGTTCATCATCATCTTCCTC ..:.x:.x..:::.:.:::.:.x...xx.....x..x::.::::::......xxx.x....xx......:::x..x.x:..xx:x..x..x..x..x..xx.x..x..x..x:x.......x...xx...........x..x.. 144M 85/144 59.0% 144/94230402 0.0% 0/144 0.0% 150919384 39295171 +8749 chr4 + 190214555 185833180 185833179 185833483 304 TCTGAC----TATAACTACCAT-GCACATTGTGTCCAAGTAATGTGAACATGTCTGGTTGGCACAGCTACAATAGCAGGGCTGATAAGTAACTGATCAGCTTATCCACAGCATTCCTTTCATG-GGAGGTCACTGTCCCCTTTGTTTCTAAAAGTCCAGCAAAGCTTAAGCATTCCAGAACCTGGTAATTCAAATTAATTACATGGTATCATGTACATGGCTCCTGGGATTATCACCTTGTAATACTGTGGCTTCTATGCTTTTAAGTTTGCCTAATTAAATCCTTTCAAATGAAACCAGTTAAGCAATT chr4 + 94230402 63082374 63082373 63082657 63082374 63082373 63082657 284 TCTGACAAAGTATAAATACCATAGCAGAGAACGTCTATGTCACATTAACATGTCTGGCTGGCATAGCAACAATAGCAAAGTTGATAAGGTGCCTATCAGCTTATCCACAGCATTCTTTTCATGAAGAGGTCATTTCTTCTTTTGTTCTACAAAGTGAAGCAATGCCAAAACATTCCAGAA-CTGATTAAACAAAT------AATAGCACCATCTACCTCTGCTAAGAAATTAACA-----------------GTCTGTACTTTCTTGCTAGCTTAATTATTTTCCTTAGAATAACAC--ATTAAGAACTT ......----.....x......-...x.xx::...:.x..x.::.x...........:.....:...x.........::.:.......xx:.:x.....................:.......-:.......:.x:::.:......::xx.....xx.....x..:x..:..........-...:.x.xx.....------x..:.:.:...x...x.xxx::xx.::....x..-----------------x...:.:....:xx.:.x..:......xx.:.:..x:...:.x..--:.....x.x.. 6M4I12M1I100M1I56M1D14M6D34M17D45M2D11M 197/278 70.9% 284/94230402 0.0% 32/278 11.5% 122750806 67463749 +3089 chr4 + 190214555 185848605 185848604 185848663 59 TATAAGGATATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGA chr4 + 94230402 66958927 66958926 66958985 66958927 66958926 66958985 59 TATAATGAAGTCTCTCTTTTGTTTTTTTTTTCTTTCTCATTACTTTTGTTTCTTTCAGA .....x..x:.....:....x..........:...:.:x..x:....x...:...x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 118889678 71324877 +3022 chr4 + 190214555 185868126 185868125 185868175 50 CTTTCCTTTCTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTG chr4 + 94230402 86519000 86518999 86519049 86519000 86518999 86519049 50 CTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTG ...:...::....:..x...:xx..........:.......:.....:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 99349126 90865429 +3136 chr4 + 190214555 185868129 185868128 185868193 65 TCCTTTCTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTCTG chr4 + 94230402 61949743 61949742 61949806 61949743 61949742 61949806 64 TCCTTGTTCTTTCCAGTACTTCTTTTCTTTCTTTCTTTTTTTTTTTTA-GTGGACTTTTACTTTG .....x:.....:.xx.x...:............:...........x.-.::..x.:.:...:.. 48M1D16M 49/64 76.6% 64/94230402 0.0% 1/64 1.6% 123918386 66296169 +3379 chr4 + 190214555 185870033 185870032 185870205 173 TTTCAACCAACTGTACTGTAAATTAGAAATAAAATAATTATAACAACTAACCACTACAGTAATTTACACTGT------TAACACTGCATTTTCA----AACTTATTGG---GCCATTGTATGCTCTAAACTTCTGCTT------------TTATCTGCCTTTTAAGTGAGGAAAATGTTATTGTCGTTATCTAGAGCT chr4 + 94230402 78778766 78778765 78778959 78778766 78778765 78778959 194 TTTCAGCCAACTGAAATGTAAAGCAGAAAGAAAATAATTATCATCATTATACAGCATTATAACCTACATGGTATTAGCCAACAATGCACTACTGACATAACTTATTAATATACAACTATGTA----AAACTCTTACTTGATGGACAAGGATTATTTTTCTTTCCAGTTAACTAAAATTTTTTACCTTAATCTGTTGCT .....:.......x.x......x:.....x...........x.:x.:..xx..x:.:x:...::....:x..------:....x....:.x:::----........::---:.x.:.:.:.:----.....::.:...------------....:.x:....:x...x.:xx...xx..x..::.x.x....:xx... 72M6I16M4I10M3I11M4D12M12I48M 111/169 65.7% 194/94230402 0.0% 29/169 17.2% 107091267 83123288 +3011 chr4 + 190214555 185901908 185901907 185901946 39 AGCAGGCTTTCTGTTAATTTAATTTAACTTAATTTCTGT chr4 + 94230402 60203094 60203093 60203132 60203094 60203093 60203132 39 AGCAGGCTTTTTATCAATTTAGTTTAACTCAATTTCTGT ..........:.:.:......:.......:......... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 125698814 64515741 +3178 chr4 + 190214555 185908247 185908246 185908334 88 AAATGAACTACTAGTGAACCCATGCAAAGGCTATATATATATATATATATATATATATATATATATATATATATATTTGTATACACAC chr4 + 94230402 60163424 60163423 60163511 60163424 60163423 60163511 88 AAATGCATAACTGACAAATCACTGCAACGGTGCTATTTAGGAAAATAAATATATATATATGTGTATATATAAATGTGGAGACACACAC .....x.:x...::::..:.xx.....x..:xx...x..x:x.x...x............:.:........x..:.xx:x.:...... 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 125744823 64469732 +3068 chr4 + 190214555 185908284 185908283 185908347 64 TATATATATATATATATATATATATATATATATATATATTTGTATACACACAAATATATATATA chr4 + 94230402 22303531 22303530 22303594 22303531 22303530 22303594 64 TATGTACGTTTATACATTGATTTATTTATATACAGACATTTGTATGTACGCACAAATATATATA ...:..::.x....:..xx..x...x......:.x.:........::..:..x.x......... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 163604753 26609802 +3011 chr4 + 190214555 185908342 185908341 185908402 61 TATATATACACATATATATACATGTATATATATGTTAGTAAATGGCCACTCGAGGTATAGA chr4 + 94230402 35359705 35359704 35359765 35359705 35359704 35359765 61 TATATATAAACATATGTACACATATATACATACATTAAAAAAGCCCAGCTTGAAGTATGGA ........x......:..:....:....:...::...:x...xxx.x:..:..:....:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 150548637 39665918 +3430 chr4 + 190214555 185931981 185931980 185932075 95 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAGATAGATATAGATATAGATACAGATATATATTTAGTGTGTGTGTTTAT-TATATATTT chr4 + 94230402 60831530 60831529 60831625 60831530 60831529 60831625 96 TCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATTT ...x.....x.............:.:.......:.:..x.:.x.:.::x.:.:xxx..x.x.:..x...x.:..x....:.:x.:.-.:....... 86M1I9M 65/95 68.4% 96/94230402 0.0% 1/95 1.1% 125100451 65114104 +3536 chr4 + 190214555 185931981 185931980 185932067 87 TCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAGATAGATATAGATATAGATACAGATATATATTTAGTG----TGTGTGTTTATT chr4 + 94230402 60831534 60831533 60831624 60831534 60831533 60831624 91 TCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACACTTCTAAATACATTTATATGGTCTGTGCGCATGTGTGTATATT .....x.............x.x.......:.:....:.x.:.x::.:.xx.x..:.....xx.....:x.:x...----.......x.... 75M4I12M 64/87 73.6% 91/94230402 0.0% 4/87 4.6% 125100447 65114108 +3416 chr4 + 190214555 185934643 185934642 185934726 84 ACATGGTGGCGGGCCCCTGTAATTCCAGCTACGTGGGAGGTTGAGGCAAGAGAATCGCTTGAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....:.--.x.x....:..........x..::...:....x.xx.x...x.:.........:.:..x:xx:.....:.. 11M2D71M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 109901447 80313108 +9544 chr4 + 190214555 185956162 185956161 185956903 742 GAAATATAGAAACTCAATGAAAAGGAAGTGATACCTTTGGATGGGCACATTCCAGCACAGGAAAATCGCTGTCT---TGTCGGCTGCTGTGCAG--AATGAGTT-GCTTGGGCAGGTATTC-----CTCTATTCTCAGCTCCCGGGTCTGCCTTGTAGCCGCAGCCAGCCTAGGGAGCATTTACGGCATGTACGTGGTGTTCATCCACAATAAAAGGAGACTAACCAGCTCAGCTTGGCGCTGCTCGCCTGGAGGCATCAGATCCT-TGGACCCTCCCCATCTGATTGGCT-GCTACCCGGTCTAGCCGAACTCCTCTGCCTTAACCTTCTGCTGCGTTCAATACATTTTCCCTCGGGATACA--GTCAGAGAAGAGCTGGTTAGGGAATCAGTGGCAGGTTA------AATTGAGCTGG-----------CTTTAAAAATCAGTGACATGATTTTCTATGAAGATGTCTAATGTTTAATTTTCCAAAGTTCTACGTAATCCA--CAAGGAGAGACGTAATAAAATGGATATGATTTAACAGGAGCG-GCTTCATGATTCCTCCCTGAAAATACCTGGAGTTTAATGCATGCCTAACACCCTACTGAAGTGATCAGGTGGCTTTTTGCAGCACTGCGTGTCTGTATAATCAACCTTAAATCAAAACAGATGGGGATGACAGAATATATTAAGAGGCTTATTAAAAGTGCC-AGGAGATGCAGTTGAATAAGGCTGCTGAAGCCATCTCAAGAAAGTGTTATAA-----ATCATTTACACAAAA chr4 + 94230402 63115551 63115550 63116279 63115551 63115550 63116279 729 GAAGCACTCAAATATAACGAAAATAAA-TAATCCCGGGAAATTAAAATAGTCCAGCACATCAATGTTGTAGTCTGCATGTCAGATAATGACAAGGTAATAAATCAGCCTGTTCTTATATCCACCAGCACTGCCCCTTCCTATCTAATCTGCATGGCTGCCTTCATTAGCCTATCAGATATTCAGAAAATGTAC------------------AGTAAGGCATAAATCAAATCTGTTAGTCACTGT-------GAAGCACCAGACCTTATACTCCTTACAAATCTGACCAGCCAGCTGCT-----GAGCTTACTTTTCCTGCCTTACCCTTCTGCTGGACTCT---CATTTTGCA-CGGCACACACGTTCAGAAAATCGACACCTACAGGAACAGTGGCAGGCTAGCAAAGAACTGATGTGGGGGAGGGGAGGTTCCAAA---CAAAGGAAAGCTTCTCAAAAAAGCTAACCG--------CTTTCCAAGCTCACATGTAGACTAAACAAGGACAAGCCCAATAAAATCAAC-TAGCTTCACAATAGCAAGCTTTGTGTTTATATTCTCAAAACACAATAAGCT--GTATCTGCTTAAAACAATATTGAA-TGGTCAGGTGGTTTCCAGTTTTAAGGCATGTTAGCATAATCAGCCTTAAATTAAAGCAGATGGGAATGACAG-ATATGTTAAGG---TTATTAAAGACCTCGAGAGGATAGAGTTAAATAAGGTTACCTAATCCATCTTAGAAGGGTATTATGAATTGCATCACTTAAACAAGA ...::.:xx...:x:..:.....x:..-.:..x..xxx::..x::x.:.x.........xx..x:.:.:x....---....:.x.:x..xxx..--...:.:.:-..:..xx.xx:...:.-----.x..:::.::xx..x:.x::.....x.x.:x...x:x:::......xx::::...:.x::x......------------------.:x.:.:x.:x..:..:x..x.:.x.x.:...:-------..:...:....:.:.-.:xx..:.x.xx......:::..:-...:.:-----x...:x.x:.:::........x..........x::..x---......x.x-...x.:...--x.....:..xx.x::x:..x:.:.x..........:..------..:...xx...-----------:.::...---..:x.:x.x.x..:..x.x:...x.:x.::--------:.......:x.:x:.:...:x.:.--......x.::.x:........x:.:-.:::..x...:x...:-....::..x..x:x::..x....:..xxx:..:.--:.::x...:...x..xx..:....-..:........:..::x.:xx:.xx..:...:x.:.......:........:...:........:.......-....:.....:---........:::x:.-..::...:x....:.......:.:.:x..x......:.::.::..:....:.-----....:...x....:. 27M1D46M3I17M2I8M1I16M5I67M18D33M7D15M1I24M1I6M5D38M3D9M1D9M2I38M6I11M11I7M3D30M8D24M2I25M1D16M1I34M2D24M1D72M1D11M3D14M1I52M5I15M 426/688 61.9% 729/94230402 0.0% 95/688 13.8% 122840611 67373944 +3035 chr4 + 190214555 185957159 185957158 185957211 53 TTTTGGTTTGTTTTGTTCTTTCTGTTTTTTTTTGTTTTTTGTTTTTTGTTGTT chr4 + 94230402 34618636 34618635 34618688 34618636 34618635 34618688 53 TTCTGGTTGCTTTTGGTTTTTTTGTTTTTGTTTGCTTTCTGTTTGTTGTTTTT ..:.....xx.....x.:...:.......x....:...:.....x.....x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 151338523 38876032 +3489 chr4 + 190214555 185979434 185979433 185979511 78 AAACAGTGCAGCA-AGGAAAAAAAGAAACAAAAAATAAAGAGAAAGAAGAAAGCAAGGAAAAGTCATAAAGACTGAAAA chr4 + 94230402 31955442 31955441 31955520 31955442 31955441 31955520 79 AAAGAGTGAGACACAAGACAATAAGAAAGAAAAGACAAAGAGGAGAGAGAAAACAAGGGAGATTAATGAAGACCAAAAA ...x....x::..-.:..x..x......x....:.:......:.:::.....:.....:.:.x.x..:.....::.... 13M1I65M 56/78 71.8% 79/94230402 0.0% 1/78 1.3% 154023992 36190563 +3170 chr4 + 190214555 185979917 185979916 185979977 61 AAACTCCATCAAAAAAAAAAAAGAAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGG chr4 + 94230402 66158969 66158968 66159029 66158969 66158968 66159029 61 AAATTACTCCAAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGAGGCAGAAATAGAGG ...:.x.x:....::..............:...:...:.....:x:...x..:..x::... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 119820948 70393607 +3169 chr4 + 190214555 185983686 185983685 185983768 83 GGGTTTTCTTGTTTGTTTGTTTCGTGTATGTGTGTGTGTGTGTTTTTTTTTTTGTTTTTTTTTTTT-----TGAGATAGGGTCTGGCT chr4 + 94230402 68990515 68990514 68990602 68990515 68990514 68990602 88 GGGATTTGCTGTTTGTTTTTCTTTTCTATTTGTGAGAGTGGGATTTGCTTTTTGTTTTTCTTTTCTATTTGTGAGAGTGGGATTTGCT ...x...x:.........x.:.:x.x...x....x.x...x.x...x:...........:....:.-----.....xx...x:.x... 66M5I17M 61/83 73.5% 88/94230402 0.0% 5/83 6.0% 116993171 73221384 +3537 chr4 + 190214555 185983687 185983686 185983752 66 GGTTTTCTTGTTTGTTTGTTTCGTGTATGTGTGTGTGTGTGTTTTTTTTTTTGTTTTTTTTTTTTT chr4 + 94230402 48767261 48767260 48767326 48767261 48767260 48767326 66 GGTTTTTGTATTTTTTTTTTTCGCGTGTGTGTGTGTGTTTGGTTTTGTTGTTGTTTGCTTGTTTCT ......:x.:...x...x.....:..:...........x..x....x..x......x:..x...:. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 137216426 52998129 +3146 chr4 + 190214555 185985219 185985218 185985360 142 CTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTT-----CCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTT chr4 + 94230402 19215408 19215407 19215558 19215408 19215407 19215558 151 CCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTA-TTCTCCAGCTTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCT .:::.:.:.:::::.::.:...:...:...xx....-----......x..::...x......xxx....x.x-....::xx:......:.x.:.:....x.:x.....-----.:.::...xx:.::..:..x....x:x.:.....x..:. 36M5I31M1D35M5I39M 87/141 61.7% 151/94230402 0.0% 11/141 7.8% 166769811 23444744 +3694 chr4 + 190214555 185985219 185985218 185985374 156 CTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTT chr4 + 94230402 64726422 64726421 64726585 64726422 64726421 64726585 164 CCTACATTCTTCTTCATCCTTTGCTCTGGATTTTCTGATTCTTTACTCTATTCCTCGTAGTTTTAGATGCCTTTCTGCTTGTTATCATTTGTATTCCATTTCTCTTCCTTTTGTAAGGTTTTTTTTTCCTTTCTCACTTCTTTCTCTTTTCCTTCCCTCTTTTT .:.x.x.....:...x.:....x:.::xxx:.....--......x:.::x...:.:x.xx:...------......x::.x..x.:x:..x:x...:x...:....:.:..:x.xxxx.::..::......:..:x.........:.:..:...:.:.::.... 36M2I26M6I94M 95/156 60.9% 164/94230402 0.0% 8/156 5.1% 121258797 68955758 +3541 chr4 + 190214555 185985223 185985222 185985364 142 CTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTT-----CCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTT chr4 + 94230402 19215408 19215407 19215558 19215408 19215407 19215558 151 CCCCCCTCCCCCCCCCCTTTTTTTTTTTTTAATTCTAGCAATTCTTTATTCTTTTGTTTCTTGAGTTCTGTATTCTCCAGC-TTCTTTTTATTTCTTTTGCCATCCTTTAAGGCTTCTCTTGACTTTTTTCTGCCTTATATTTTTCTATCCT .:::.:.:::.:::.::.:...:...:...xx....-----......x..::...x......xxx....x.x..:..:xx.-......:.x...:.:..x..x.....-----.:.::...xx:.::..:..x....x.x.:.....x..:. 36M5I40M1D26M5I39M 90/141 63.8% 151/94230402 0.0% 11/141 7.8% 166769815 23444740 +4335 chr4 + 190214555 185985229 185985228 185985382 154 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 + 94230402 50176266 50176265 50176414 50176266 50176265 50176414 149 TTTTCTGTCTCACTGCTCTCCTTTCTTCCTTTAT--CCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTAT---TCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTT ......x...:x..x:::.:.......:....x.--.:x:.:x::...x:x.:x........x......x.x.---..x.....x::...:...:...:.:xxxx..:x...:..:x::.....x::.:...::.........::.:.x..... 34M2D37M3D78M 95/149 63.8% 149/94230402 0.0% 5/149 3.4% 135808963 54405592 +3408 chr4 + 190214555 185985245 185985244 185985353 109 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTT chr4 + 94230402 36195258 36195257 36195366 36195258 36195257 36195366 109 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTT .....:...x.x:...::x....:.xx.xx:x:..........x:........:....:..:x...x..:.xxx:..x..:x:..x.....:.:x::..:..:..:x.. 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 149789987 40424568 +3408 chr4 + 190214555 185985249 185985248 185985357 109 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTT chr4 + 94230402 36195258 36195257 36195366 36195258 36195257 36195366 109 CTTTCCTTCGTGTTTTTCATCTTCCAATAGCATTTTCTTTCTTGTTTTTCTTTTTTTCCTTTGTTTGTTTTAAATTTACTCATTTGCTTCCCTTGCCCCCTCTTTTGTT .....:...x.x:...::x....:.xx.xx:x:..........x.:.......:....:...x..:x..::xxx:..x..:x:..x.....:.:x::..:.....:x.. 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% 149789991 40424564 +3240 chr4 + 190214555 185985261 185985260 185985383 123 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..:..:..:..:::xx.x.:..:::...:....:.:x..::.:.x....xx..:..x::.:xxx....:x:.::...x:xx::.:.:...::.:.::..........::.:...x... 123M 69/123 56.1% 123/94230402 0.0% 0/123 0.0% 122288144 67926411 +3687 chr4 + 190214555 185985265 185985264 185985396 132 CTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTT chr4 + 94230402 63697117 63697116 63697238 63697117 63697116 63697238 122 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTT----------TACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATT ....x..:..:..:..:::xx.x.:..:.....:....:.:x..:..:.x....xx..:..x::.:xxx....----------.x....:.:x.xx.......:..:::.::..........:....:.x.. 73M10D49M 78/122 63.9% 122/94230402 0.0% 10/122 8.2% 122288148 67926407 +3051 chr4 + 190214555 185985272 185985271 185985324 53 TCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCT chr4 + 94230402 90927829 90927828 90927881 90927829 90927828 90927881 53 TCCCCCATTCTTTTTTTTTTTTCTTTCAATTTTTCTCTTTTTCTTCTCCTCCT ..:::.x......:...:.........xx.:.....:........::.:.... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 95057443 NA +3122 chr4 + 190214555 185985302 185985301 185985357 56 CTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTT chr4 + 94230402 7218317 7218316 7218372 7218317 7218316 7218372 56 CTTTTTTTTTTTCTTTTATCCTTTCCCCCCTCCCCCCCCTCCTCCCCCCATTCTCT ....:...........:x.:.:....::...:..::..:....:..::.x....:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 178766985 11447570 +3568 chr4 + 190214555 185985306 185985305 185985464 159 CTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTCCCTTCTTTCTTTCCTTTTTCTGTTTTTGTAGAGACAGGGTTTCG-CAA-TGTTGCCCAGGCT chr4 + 94230402 63697117 63697116 63697274 63697117 63697116 63697274 158 CTTTATTCCTCTCCTT---TCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTTAAGAAGAAAAGCTGTAGACAATTGTTGCCTATACT ....x..:..:.....---...xx:x..:::..:..::.....:x..::.:.x....xx.....x.:..xxx:::..x....:.:x.xx.::..:::....:.....::..:...::.:.x.x...:x::...x.:.x.x.x.-...-.......:.x:.. 16M3D124M1I3M1I13M 95/156 60.9% 158/94230402 0.0% 5/156 3.2% 122288189 67926366 +3175 chr4 + 190214555 185985312 185985311 185985433 122 TTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTCCCTTCTTTCTTTCCTTTTTCTGTTTTTGT chr4 + 94230402 63697118 63697117 63697237 63697118 63697117 63697237 120 TTTATTCCT--CTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTAT ..:x.....--..:.:....xx:x..:::..:..::...:.:x..::.:.x....xx.....x....xxx:::..x....:.:x:xx.::...:..:.::.....:....:.::x.....:. 9M2D111M 71/120 59.2% 120/94230402 0.0% 2/120 1.7% 122288194 67926361 +3339 chr4 + 190214555 185985352 185985351 185985439 88 TTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTCCCTTCTTTCTTTCCTTTTTCTGTTTTTGTAGAGAC chr4 + 94230402 37898147 37898146 37898223 37898147 37898146 37898223 77 TTACTTCTGTCTGCTTTTCTTTTTCTTTGTTTCTATCTTTCATTTATCTC-----------CTATTTTGATTCTGTTCTTGTAGGGAC ..x:....x...x::.............x.....x......x...x.:..-----------..x.::.xx.......:......:... 50M11D27M 59/77 76.6% 77/94230402 0.0% 11/77 14.3% 148087205 42127350 +3011 chr4 + 190214555 185985368 185985367 185985414 47 TTCTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTCCCTTCTTTCT chr4 + 94230402 4626225 4626224 4626271 4626225 4626224 4626271 47 TTCTTATTTTTTTTTTCTTTCTTTCTTGCCTTTTTTCCCCCCTTGCT .....x..:...:..............x:....:.....::...x.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 181359143 8855412 +3624 chr4 + 190214555 185987662 185987661 185987769 108 TACATGAATTTAAAAAAAAATTAGGCATGGTGGTGCACACATGTAGTCCTAGCTACTCAGAAGGCCAAGGTGGGAAGATTGTTTGAGCCCAGAAGTTTGCGGCTATAG chr4 + 94230402 76033172 76033171 76033277 76033172 76033171 76033277 106 TATGTAATGTCATGAAAGGATGATACACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.:.xx.:.x:...::..x.x:..::.........:--......:.:.......:::.....::..x:xx.x::.x:::....:........:..xx....:... 39M2D67M 67/106 63.2% 106/94230402 0.0% 2/106 1.9% 109954490 80260065 +3054 chr4 + 190214555 186024634 186024633 186024671 38 CTCCAAAAAACAAAACAAACAAAAAATAAAAAAAAAAA chr4 + 94230402 37421998 37421997 37422035 37421998 37421997 37422035 38 CTCTAAAAAACAAAACAAACAAACAACAAAAAAAAAAA ...:...................x..:........... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 148602636 41611919 +3428 chr4 + 190214555 186025935 186025934 186026000 66 AAAAACAAAAAAAGCAAAACGAAACAAAACAAACAAAAACAAAACAAAAAACCCAGCCAGAATGTA chr4 + 94230402 35745119 35745118 35745177 35745119 35745118 35745177 59 AAAAAAAAAAAAGGCAGCATGAAACAAAACAGCCAACAACAAAATAAAA-------CCAGAATGTA .....x......:...:x.:...........:x...x.......:....-------.......... 49M7D10M 50/59 84.7% 59/94230402 0.0% 7/59 11.9% 150280816 39933739 +3191 chr4 + 190214555 186041771 186041770 186041842 72 GTGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x.:..:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 110008565 80205990 +3262 chr4 + 190214555 186049760 186049759 186049836 77 GTCATGTAGCTGTAGTCCCAGCTACTGGAGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x:..:.xx......:.........x..:........x.xx.x...x.:........::.:..x:xx:..:..:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 110016559 80197996 +3054 chr4 + 190214555 186052933 186052932 186052988 56 CCAGCCTATACTAGTATTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 17384389 17384388 17384444 17384389 17384388 17384444 56 CCGTCCTCCACTGACATTTATTGGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ..:x...x:...:::....x..xx...:...:...:...:................ 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 168668544 21546011 +3325 chr4 + 190214555 186074765 186074764 186074841 77 TTTTATAAGCTTTTTTCTATTTTTAATTTTCTTCTTTTTTTTTAACTTTTTAAACGTTTTTGTTAAAAACGAAGACA chr4 + 94230402 91445958 91445957 91446031 91445958 91445957 91446031 74 TCTTACAAGTTTGTTTGTTTGATTAATTTTCTTTTTTTTTTTTCCTTTTTTAAA---TTTTCTTACAAAGGAGAACA .:...:...:..x...x.x.xx...........:.........xx:........---....x...x...x..::... 54M3D20M 57/74 77.0% 74/94230402 0.0% 3/74 4.1% 94628807 NA +3277 chr4 + 190214555 186075494 186075493 186075572 79 GTGGTACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGAAGGAACCCTTGAGCCCGAGAGTTGGAAGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:..:.--......:...........::........x:xx:x.:.:.x.....:...:::..:.xx::....:.. 10M2D67M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 110042293 80172262 +3697 chr4 + 190214555 186076025 186076024 186076096 72 GTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTGAAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:.........:.::........x.xx.x...x................x.xx:..:..:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 110042819 80171736 +12926 chr4 + 190214555 186076588 186076587 186077067 480 ACTTTTTAATGTTTCTTT--------TCTACAG-CAGAATCATGAGACAGACTTTGCCTTGT-------ATCTACTTTTGGGGGGGCCTTTTGCCCTTTGGGATGCTGTGTGCATCCTCCACCACCAAGTGCACTGTTAGCCATGAAGTTGCTGACTGCAGCCACCTGAAGTTGACTCAGGTACCCGATGATCTACCCACAAACATAACAGTGTTGAACCTTACCCATAATCAACTCAGAAGATTACCAGCCGCCAACTTCACAAGGTATAGCCAGCTAACTAGCTTGGATGTAGGATTTAACACCATCTCAAAACTGGAGCCAGAATTGTGCCAGAAACTTCCCATGTTAAAAGTTTTGAACCTCCAGCACAATGAGCTATCTCAACTTTCTGATAAAACCTTTGCCTTCTGCACGAATTTGACTGAACTCCATCTCATGTCCAACTCAATCCAGAAAATTAAAAATAATCCCTTTGTCAAGCAGAAGGTAAGTT chr4 + 94230402 63155847 63155846 63156335 63155847 63155846 63156335 489 ACTTGTTAACGTTTGTTCATTCTGCCTTTGCAGATAAAACTATGGGATGCTCTATTCCTTGCTGGAACAGCTTATCTTTCAGACTGGTGTTTG----TTTGCTTACTGTGTGCATCAGTTGGAAAGCAATGTCAGATCAGAAATACAATGGCAGATTGTAGTCACCTAAAGCTGACACAAATTCCTTCTGATCTTCCAAAAAACATAACAGGCTTGGACATTTCCCATAATCAGCTAAAAAAGCTAGATCCTGAAAATCTGACCGAGTACAGCAATCTGATTTACTTAAATGCAGGATACAACATCATCTCTAAACTGAAACCAGGATTGTGCAAAAATTTGCCCCTGTTGCAAATCTTGAAGCTAGAACACAATCAATTGCACGAACTCCCTGATGGAGTGTTTGCTTCCTGCAGCAACCTGACTGAGCTCAATCTAGGATATAAC---ATCATAGAAGTAAAAAATGATCCTTTCAAAACCCTGGAGGTAAGCT ....x....:....x..:--------.:.:...-:.:..::...:..::xx..x.x.....:-------:::..::...x:.:xx.x:x....----..x.xx.:...........xx:::xx.xxx.:..:xxx:.:..xx..:x.:.x..x..:..:..:.....:...:....x..::.x..:xx......x..x.x...........xx...:..x..x..........:..x.:..:::..xxxx.:.xx..::.x..x::...:...x.x..:.:.x:...::...:.....x:....:......x......:.:....:.......x.:..x:.x...x....:x..:.:.....x..xx.:......x.::.::x:x....::.....::.::x.....:.:.....xx..::.......:...x....x:x:.x:...---...xx::..:.x......:....:..::xx.xx.x.:.......:. 18M8I7M1I28M7I24M4D350M3D46M 298/473 63.0% 489/94230402 0.0% 23/473 4.9% 122920741 67293814 +77727 chr4 + 190214555 186082302 186082301 186084881 2580 TTTTTTTCCTACCTTTAGTTTTCTCCAGGGTGTTTTCACGCAATTGGAAGATTATTTGGCCTCTTTCTGAACAATGTCCAGCTGGGTCCCAGCCTTACAGAGAAGCTATGTTTGGAATTAGCAAACACAAGCATTCGGAATCTGTCTCTGAGTAACAGCCAGCTGTCCACCACCAGCAATACAACTTTCTTGGGACTAAAGTGGACAAATCTCACTATGCTCGATCTTTCCTACAACAACTTAAATGTGGTTGGTAACGATTCCTTTGCTTGGCTTCCACAACTAGAATATTTCTTCCTAGAGTATAATAATATACAGCATTTGTTTTCTCACTCTTTGCACGGGCTTTTCAATGTGAGGTACCTGAATTTGAAACGGTCTTTTACTAAACAAAGTATTTCCCTTGCCTCACTCCCCAAGATTGATGATTTTTCTTTTCAGTGGCTAAAATGTTTGGAGCACCTTAACATGGAAGATAATGATATTCCAGGCATAAAAAGCAATATGTTCACAGGATTGATAAACCTGAAATACTTAAGTCTATCCAACTCCTTTACAAGTTTGCGAACTTTGACAAATGAAACATTTGTATCACTTGCTCATTCTCCCTTACACATACTCAACCTAACCAAGAATAAAATCTCAAAAATAGAGAGTGATGCTTTCTCTTGGTTGGGCCACCTAGAAGTACTTGACCTGGGCCTTAATGAAATTGGGCAAGAACTCACAGGCCAGGAATGGAGAGGTCTAGAAAATATTTTCGAAATCTATCTTTCCTACAACAAGTACCTGCAGCTGACTAGGAACTCCTTTGCCTTGGTCCCAAGCCTTCAACGACTGATGCTCCGAAGGGTGGCCCTTAAAAATGTGGATAGCTCTCCTTCACCATTCCAGCCTCTTCGTAACTTGACCATTCTGGATCTAAGCAACAACAACATAGCCAACATAAATGATGACATGTTGGAGGGTCTTGAGAAACTAGAAATTCTCGATTTGCAGCATAACAACTTAGCACGGCTCTGGAAACACGCAAACCCTGGTGGTCCCATTTATTTCCTAAAGGGTCTGTCTCACCTCCACATCCTTAACTTGGAGTCCAACGGCTTTGACGAGATCCCAGTTGAGGTCTTCAAGGATTTATTTGAACTAAAGATCATCGATTTAGGATTGAATAATTTAAACACACTTCCAGCATCTGTCTTTAATAATCAGGTGTCTCTAAAGTCATTGAACCTTCAGAAGAATCTCATAACATCCGTTGAGAAGAAGGTTTTCGGGCCAGCTTTCAGGAACCTGACTGAGTTAGATATGCGCTTTAATCCCTTTGATTGCACGTGTGAAAGTATTGCCTGGTTTGTTAATTGGATTAACGAGACCCATACCAACATCCCTGAGCTGTCAAGCCACTACCTTTGCAACACTCCACCTCACTATCATGGGTTCCCAGTGAGACTTTTTGATACATCATCTTGCAAAGACAGTGCCCCCTTTGAACTCTTTTTCATGATCAATACCAGTATCCTGTTGATTTTTATCTTTATTGTACTTCTCATCCACTTTGAGGGCTGGAGGATATCTTTTTATTGGAATGTTTCAGTACATCGAGTTCTTGGTTTCAAAGAAATAGACAGACAGACAGAACAGTTTGAATATGCAGCATATATAATTCATGCCTATAAAGATAAGGATTGGGTCTGGGAACATTTCTCTTCAATGGAAAAGGAAGACCAATCTC---TCAAATTTTGTCTGGAAGAAAGGGACTTTGAGGCGGGTGTTTTTGAACTAGAAGCAATTGTTAACAGCATCAAAAGAAGCAGAAAAATTATTTTTGTTATAACACACCATCTATTAAAAGACCCATTATGCAAAAGGTAGGT--------AAACATTGT---------GAAATTTT------AAGTGTGTA--------------CTTGCTTTT-----------------CAATTAAATTTCTTTTTT---------TTTTTTTGAGATGG-------------AGTCCTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTTACTGCAGCCTCCACCTCCTGGGTTCAAGTAATT---CTCCTGCCTCAGC------CTCTC---------AAGTAGTTGGGAT--TACAGGCAC--GCGCCACCAAGCCTGGC--TAATTTTTGTATTTTTATTAGAGATGGGGTTTCACCG-TGTTGGCCAGGCTTATCTTGAACT--------CCTGGCC-------------TCA----GGTGAGCTTCAATTAAACTTTTAAATATTACCAATATTACTCACAACTCAAAGAATTTTTAA---AATAAAATTAAGAAAA----------AAAAAACCTGAGT------TTCAGTAACAGTTTAAACTCTACAGAGTATTTTTAA--ATAGTATTGCTTCTGGCTGTTAAAAACCGTAT-----ATTAATTC-----------TTCAATACATTTTTTTA-------CTTAGATTCAAGGTACATCATGCAGTTCAACAAGCTATTGAACAAAATCTGGATTCCATTATATTGGTTTTCCTTGAGGAGATTCCAGATTATAAACTGAACCATGCACTCTGTTTGCGAAGAGGAATGTTTAAATCTCACTGCATCTTGAACTGGCCAGTTCAGAAAGAACGGATAGGTGCCTTTCGTCATAAATTGCAAGTAGCACTTGGATCCAAAAACTCTGTACATTAAATTTATTT chr4 + 94230402 63158203 63158202 63160910 63158203 63158202 63160910 2708 TTTTTCCCTTCTTTTTAGTTTCACACAGGATGTTTACATGCGATTGGAAATCTGTTTGGCCTTATACTGAACAATGTTGAACTTGGTGAAAATCGTACAAAGAAACTTTGTACAGAGTTATCAGACACAGCAATTCAGAACCTCTCACTGAGCCATGTGAAGCTTTCGCACATTAACAGGTTAACTCTCCAGGGACTGCAAGGAACAAACCTCACAGTTTTAAACCTTTCAAAAAATTCTCTCTCTGTGATAGAGGATGACTCATTTCAGTGGCTGTCAAAATTAGAGTACTTAAACTTGGAGGATAATAACATCATTAATGTGTCTTCGCATTTATTTTATGGATTGTCCAGCATTACACATCTGAATCTGATAAACTCACTTACTGGG---------------------------AAAATTGAAGATTTTTCCTTCCAATGGTTACACCACTTGGAGTACCTTATAATGGATAATAACAATTTTCCACGGATTACCACTAACATGTTCACAGGTCTGAAAAACCTGAAATATCTAAGTCTTTATAACTGCAACACAAACTTACAAAGAATAACTAATAAAACATTTGTATCACTTGCTAATTCCAGGTTGCAGGTTCTCAATCTTACAAAAACAAGAATCTCTACAGTAGAAAGTGAGGCATTTTCCTCCTTGGGACAACTGAAAATTCTTGATCTTGGTCTCAATGAAATTAATCAAGAGCTCACAGGTCATGAGTTTGAAGGTCTCAATAATATAGAATATATTTATCTTTCTTACAACAAAAATGTGACTTTGCGAAGTGAATCATTTATTTTTGTTCCAAGTCTTAGAAAACTGATGTTAAGGAAGGTAGGTTGCAATAATCTGGCAATTTCTCCTTCACCTTTTCATCCACTGCGGAATCTGACTGTCCTAGACATCAGCAATAACAACATAGCAAACATAAGGGAAGACTTGTTCAATGGACTTCATGAACTCGATATTCTGAATTTGCAGCACAATAATTTAGCTCGACTTTGGAAATGTGCAAACCCAGGAGGACCTGTTCTTTTTTTAAAAGACGTTCCCAACTTGCATATTCTTAATTTAAAATCAAATGGCTTTGATGAGATTCCAGTTCATGTTTTCAAGGGTCTGCATCAGTTAAAAGACTTGGATTTAGGATCAAATAATTTGAATTTGCTGCCAGCGACTTTATTTGATGACCAAACCTCTCTAAATACGTTGAACCTTCAGAAAAATCTAATAACCTCAGTTGAAGAAAACGTGTTTGGTCCAGCTTTCAAGAGCCTGAGAACACTAGAGATGGATTTCAATCCATTTGATTGCACCTGTGAAAGCATTGCTTGGTTTGCTAGTTGGCTAAACGACACTCAAGCATATATACCCGGATTGCAGTCTCAGTACATTTGTAACACCCCGCCTAAATATCACGGTACTCTGGTGTTGCATTTTGATACCTCAGCCTGCAAGGACAGTGCTCCATTTAAGCTTCTGTTTTTGATCACTACCACTGCTGTGATGCAATTCATGTTCATTGTTCTTCTCATCCATTTTGAAGGGTGGAGAATAGCTTTCTACTGGAATATTTCTATAAATCGAATACTTGGCTTTAAAGAGCTTGACAGACTACCGGGAGTGTTTGATTATGACGCCTATGTTATTCATGCAAGAAAGGACACAAATTGGGTGTTGACAAACTTCACCACTCTGGAAGAAAATGAGCAATTTCAAGTTAAGTTTTGTCTAGAAGAACGAGACTTCGAAGCAGGAATATCTGAGTTTGAAGCTATAATTAACTGCATAAGAAGGAGCAGGAAGATTATTTTTATTGTGACTGAACATCTCTTACAGGATCCATGGTGCAGGAAGTGAGTAGAATATAAAACACTGTATGTAAGGGGAAAATTTCTTAGCAGGTTTTTAACAAGGTAAATTATTTTGCTATTTAGATTAATAAAAAATGCAATGCAAATTCTCCTTTAATATATCCTACTTTTGGAACAGTTACAAATTTAATAAACTTAAT-TGCTGTACATGTACACTAGTAGATATTTGAATCCATCTGCATATATGTCTTTTTTTTTCTTTTCAAAAAGTCGAACTGTTACCTTTGCAGACTGCTTTCCTTAAAATTATGTGTTTGAAACAGAACAATCATTGGTGTGATCA---CTAGCATCCATTTTTATATATCTTTAAGCAAC-TCTTTTCACTGCTCTTCAGCAG--TGATCTCAAATCTGAAGGAACCTTGCTAATTATGGCTAGGTCAAGACAGTAGACTTAGGTTATATTTTTAGAGGATGCT----TTATTCTTTATTTAAAAGGTAACTAATCTGATGTAAGTAATGAGAGTTTTATATCATAAAACATACATTAAGACTTCACTTTGAATTTAGACCCTG------ATTTTACAGCACAGTATTATGTGC-ACTATCAAAAGATCTATTTGTCATTTGTTCCCAAGCCTGAGCTTAAAATTTTGTCTTATGTTTCTTTCAGGTTTAAGGTGCATCATGCTTTACAGCAAGCTATTGAGCAAAGTCGAGACTCCATCATACTGATCTTTCTTCATAATATACAAGATTACAAGTTGAATCATGCACTTTGCTTGAGAAGAGGAATGTTCAGATCTTGCTGCATCTTGAACTGGCCAGTCCAGAAGGAAAGAATCAATGCATTTCATCAGCAGTTAATGATGGCACTTAAATCTAATAGTAAAGTGCGCTGAATTCAGTT .....::.:.x::........:x:x....:.....x..:..:.......:x:.:........:x.x...........:x.:..x...xxx.::.x....:....:..x...x::..:...x..:.....:xx....:...:..x..x.....:x.::xxx....x..xxx..::.:..:xx:....:..:x......:x.:x.:.....:.....x:.x:.x:.:.....xx.x..:xx::.xxx....:.x.:x:.:..:..x...xxx.....x:..x..:....:..:..xxx.:.:...x.......:..xxxxx..x...:...x..:.:x..x:.:..::.x.:..:::.x.x::.:......:...x.x:x..x:.....:::---------------------------..:.....x........:..:..:...:..x.x:::......:......xx.....x:....::..x.....x.x..x.xx.x:..:...........x:...x............::.......x.x:....x.xx:....::..:.:..xxx.:..x...:....................x....:xxx..:..x:.x.....:..x..x..:.xx.:......x.x.:....:.....x..x..:..:.xx.....x..x..::..:.x.....:..x..:..:.........::x.....:........:..x..:.xx::......x:.x.....xxxxx.x..:........:........:x.:x..xxx:..xxx..x:.x..x...:::..x..:.....:...x:.x:.......:.xx.:.:...:.x::x:..x...x...xx.x:...........x..:..x..x..x..x..::....::.:..:..:x.x.....:...........x.......:x..x...x....x:.x..x...x.x:....x..x.....x:..........:..:..:.....x..:..:......:::........x..x..x..::..:x...::....:.::x.x:.:x..:.x..:..:.....:..::.:..x..:........:.....:......x.x..:.......:.:.::x.x.::....::x.x.x..........::........:..:x::..x.....:x..x.x...:..:.:..:::x........xx.:..............:.....x.....x..x.....::.:..x..x..:..x..........:..:.....xx:x::....x...x::..:.....x...........x........:.....:.......:..:....x.x.....x..:..x:.xx.:..x..:.:::..:x:xx:..x...x....:.....:..:...x.x.....:..xx::.::...xx:.x.........x...x.:.....:........:..x...:.:..::.x..:x......x.....x.:::x..x..xxx..:..x..:.....x...........:.....:..x.....:...x....:..:......:....x:..x.....:.x.....:..:.....:x.x.......x:x.:.:.xx......x....xx..x...:.x........xx:x..:..:.x::.......x.x.:x.x.:...x.:x.xx.....:.::.x..x....:..---.:..:........:......x.:.....:..:..:..x:.x.:...::.x.....x..x:.....x....x.:...:.....:..:.........:..:.:..xx.x.....x...x.:..:....x:....::.:..::..--------.....:...---------....x...------.:..x.x..--------------:.....x..-----------------....xx..x....::...---------.x:.....::.::.-------------.:x.:.:x.-..:..:x..x.:xx:xxx.:..xx:.x...x::..x..xxx.::.xx::::x::.::.xxx.....:x.:.:---..x:.:...:x..------..:..---------.x..:x...::.:--x...:x..:--.:.:x.:..---..:..--:x......:...x.:.x.x..x:.:-xxx......:.-.x..x:x...--.x....::..::--------...x..:-------------...----:..:::...x::...x.:.....:.x:x.:.:----...:..x:x.:.:...:::.xx:...---:..:x..x...x:.:.----------.x.....x.:x:.------....x.xxx.:....:..:..:------.....xx.--.:......::x.x:-:..:.:....:x:x...-----...x:...-----------:.:..x.:x..x.:...-------:.:..:..:.....:........xx.x..:...........:....:..x:..:.....:...:..:.:..:...x.x:.x..x.x......:..::....:........:..:...x.............:.:....::.....................:.....:...x.:..x::...x....:...xx.:..:xx::.:......::...:..x.::xxx..:.::.:....:.x.. 390M27D1318M3I142M8I9M9I8M6I9M14I9M17I18M9I14M13I9M1D72M3I13M6I5M9I13M2I9M2I9M3D5M2I25M1D11M1I10M2D12M8I7M13I3M4I32M4D26M3I16M10I13M6I22M6D8M2I14M1D17M5I8M11I17M7I242M 1681/2535 66.3% 2708/94230402 0.0% 218/2535 8.6% 122924099 67290456 +3383 chr4 + 190214555 186089465 186089464 186089544 80 AGGAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAAAAAGAAAGGAAGATGAAAGAAAGAAAGAAAAGAAAGAAAAATTCA chr4 + 94230402 38078778 38078777 38078857 38078778 38078777 38078857 80 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAACCCA ..x......:.::.....:......:.::.:...:..x.x....:.:x..xx.x.:.....:x::.:...:.....::.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 148010687 42203868 +3320 chr4 + 190214555 186092568 186092567 186092632 65 GATCTTCTTGGCTCCTTGCAGAGATCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTAT chr4 + 94230402 56633316 56633315 56633378 56633316 56633315 56633378 63 GATCTTCT--GCTTCTCTAGGAAGTTTCTTTCTCCCTCCCCCTCTCTCTTTTTTTTTTTTTTAAT ........--...:..:xx:..::.:...:....:...:.:....:.:..............x.. 8M2D55M 48/63 76.2% 63/94230402 0.0% 2/63 3.2% 129459252 60755303 +3149 chr4 + 190214555 186092575 186092574 186092629 55 TTGGCTCCTTGCAGAGATCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 + 94230402 17051633 17051632 17051687 17051633 17051632 17051687 55 TTGGCTCCCTTCAGCTTTTTGTCTCTCTATCTCTCCCTCTTTTTTTTTTTTTCCT ........:.x...xxx.:.x.......x......:..:.............::. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 169040942 21173613 +3058 chr4 + 190214555 186092587 186092586 186092626 40 AGAGATCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 68982952 68982951 68982991 68982952 68982951 68982991 40 AGAGTTTTATCTTTCTCTCTCTCTCTTTTTTTTTTTTTTT ....x.:.x...:........................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 117109635 73104920 +3098 chr4 + 190214555 186092593 186092592 186092654 62 CTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTATCTGAGTGAGTACTTGGTAGAAA chr4 + 94230402 45847281 45847280 45847340 45847281 45847280 45847340 60 CCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTTCCCATGGATGTGTTCT--GTAGGAA .::.:.x..............................:x:x..::..x..x..--....:.. 53M2D7M 47/60 78.3% 60/94230402 0.0% 2/60 3.3% 140245312 49969243 +3084 chr4 + 190214555 186092594 186092593 186092626 33 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 + 94230402 6554024 6554023 6554056 6554024 6554023 6554056 33 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 179538570 10675985 +5738 chr4 + 190214555 186105326 186105325 186105701 376 GCCAGCCGCGCCGCGGGAGCAGTGGGG-----ACCCTGCTCTCTTGG-CCCAGTAGCCCTAGAGCGGGTAAAGCCCCGCCCCAGCCCCCCACTCCCTCCGGCGGGGGCTG-CTCCCCTGCTCGCCTGGTGGTCCCAGCGCGGCCGCCCTCGGGCCCCGGCGGGGTCTGGGCCGCGCTCCCCAGGAACCCGCTCCAGCCTGGCC-CCGGAGAGCG-----AGAGCTCGGCGCCTGCGTGGCCCCCG---------------GGGCTGGCCCCAGAACCCTGTTCCTTACGCTGCCTGACATCGGCGAGGAGGGGGCCTCGGACGGCGACTCCGGGGATG-------------GCGAAGCGTGAGTAG--------CAGCGTGGTCCGGGCG----CGTGTACCTTTTGCCGGGACCCCCGACCCCTCCGC chr4 + 94230402 63164132 63164131 63164517 63164132 63164131 63164517 386 GCCAGGCTCGCAGGGTGGGGAAAGGGGCTTCCACCCCGCTGCCATGAACCTAGCGGCGCTAGAACTGG----------------------GCTCCCTCCTG----GTCTGGCTccgccgctccgccgcgggtcccagcccggccgcccccagcccccggc-----------cgcccTCC---GGAGGCGGCTGCATCCCGGCTGCCGGCGGGCGTCCCCCACGCCCGCTGCC--CGTCGCCACGGAGGAGGCCGGGAGTTGGGCGGGCGGCAAGGCGCGGCTCATCACCCTGCCCGACATTGGGGAGGAGGCGGTGGCGGAGAGCGATGCCGAGGAGGCAGCGTGCAGCTCGCGAAGCCCGAGGTGAGAGCGCCCGGCGGGGTCGGGGAGGGGCAGCGGGCGGTCTG-TGGGTCCCCATTCTCCTCCGC .....x.x...x.x.x.:.x.:x....-----....:...x:.x..:-..:..::..x.....:.x..----------------------:........x.----.x...-....x.:....xx.:.xx.........x.........:.:.x.......-----------...x....---...:x.x...x..x..:...:-....x.:...-----x:x..:..x:...--...x...x.x.---------------....x...xx..:::.x.x.:..x.:..x.....:.....:..x.......x..:xx....x:....:x...:...x.-------------.......x:...xx.--------.:...x....x...x.----x.:.x:.xx.:..-:...x....xxx.:....... 27M5I15M1I20M22D11M4D5M1I49M11D8M3D21M1I10M5I13M2D11M15I78M13I15M8I16M4I13M1D21M 234/333 70.3% 386/94230402 0.0% 96/333 28.8% 122941194 67273361 +3046 chr4 + 190214555 186130265 186130264 186130323 59 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAATCTATAT chr4 + 94230402 4618357 4618356 4618415 4618357 4618356 4618415 59 CCTTATCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGAT .::.x.......::..............x:x...::......x.x......:.x..x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 181511908 8702647 +3130 chr4 + 190214555 186130268 186130267 186130323 56 TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAATCTATAT chr4 + 94230402 4618362 4618361 4618417 4618362 4618361 4618417 56 TCTCTCTTCCTCTCTCTCTCTCTGCCTATGCATATATCTCTATATAGTATAGATAT .......::..............x:....::......x.x......xx..xx.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 181511906 8702649 +5828 chr4 + 190214555 186149557 186149556 186149723 167 TTCCTGCAGCAAATCCTTGTCATCCTTTTCCTCCAGCGGAAGCCATACACCCACGGGAGCCCACACCTCTTGGTCTGGGTCGGCCACACAGAGCTCTACCACCGGCTCATCCACGGAGAGGGGCTCCGTTTATTCCTGGAGAGATGACGTATGTCTCAGAATATTTT chr4 + 94230402 63180371 63180370 63180531 63180371 63180370 63180531 161 TTTTCACAGTGAAATGCTTTCATCAGTTTCATCTAGTGGACATGCAACACCCACAGACCTGAATAATTCTTGGTCTGGA------GTAAAAAGCTGTACTACTGGTTTGTCTACTGAAAGAAGTTCCGTTTACTCCTGGAGGGATGATGTATGTCACAAAAGCTTTT ..::::...::..x:x:.x.....xx....x..:..:...x::xxx........:.:xx:xx.:.x:...........:------::.x.:....x...:..:..:.::..:..x..:..::.:........:........:.....:.......x..:..xx.... 79M6D82M 105/161 65.2% 161/94230402 0.0% 6/161 3.7% 122969186 67245369 +3266 chr4 + 190214555 186150359 186150358 186150434 76 TTTGTTGTTGTTGTTGTTGTTTTTTGCTTGCTTGCTTTCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 76208472 76208471 76208547 76208472 76208471 76208547 76 TTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTCCTTTTTCTGATCCATTCCCACTTACTTGTTCCTTTGTTTTTT ...x..x..............x....:...:..x....:...xx::.x:.x:.x...x:..x..::...x...... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 109941887 80272668 +3060 chr4 + 190214555 186150374 186150373 186150429 56 GTTGTTTTTTGCTTGCTTGCTTTCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTT chr4 + 94230402 45847262 45847261 45847317 45847262 45847261 45847317 56 GCTGGCTTTAAGCTGGTTGCCTTTTATCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:..x:...x:x:..x....:..:.x.........x...:................ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 140303112 49911443 +3092 chr4 + 190214555 186150380 186150379 186150436 57 TTTTGCTTGCTTGCTTTCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 153455 153454 153511 153455 153454 153511 57 TTTGCCTGGCTTGATTTATCTCTCTCTCTCTCTCTCTTTTTTTTTGTTGTTGTTGTT ...xx..x.....x...x...........x.....:.........x..x..x..x.. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 185996925 4217630 +7918 chr4 + 190214555 186151896 186151895 186152061 166 TGTTTAGGAATTTGACGAAGCCAGTTCACAGTCAGTGCAGCGGTTACTCTGGGAGGTGGAGGAAATGTTATTTGAAGGGAAAGTGAACCCTCAGACCCAGAGTCTGCTGGCCGAATGCGGGGAGTGGACAAGAAGATCCCTCCATTTGAGGTGGGA-----CCTTGGTGGT chr4 + 94230402 63181864 63181863 63182034 63181864 63181863 63182034 171 TATGTAGGAATTTGATAAAGCCAACACACAGAGAGTGCATCAGCTATTTTGGGATATTGATGAAATGCTGTTTGAAGGAAAAGTGACCTCCCAAACTCAGAGCCTGCAGGCAGAATGCGCAGACTGGGTTAAGCGATCTCTTCATCTAAGGTAAGGAAATTTCTTGCTGGT .:.x...........::......::x.....xx......x.:.:..:.:.....x:.x..x......:.:........:.......x.:.:..:..:.....:....x...x.......x:..x...::x.::x....:..:...:.:....::.:-----:....x.... 156M5I10M 119/166 71.7% 171/94230402 0.0% 5/166 3.0% 122970032 67244523 +3400 chr4 + 190214555 186152498 186152497 186152569 72 ATATGGATTGGGTATGAAGGCAAGCTTTTCTTTTCTTTTTGCTTTTTTTTTTTTTTTTTTTTTTTGA--GATGG chr4 + 94230402 7488435 7488434 7488508 7488435 7488434 7488508 74 ATTTAGAGTGGGTAAAAAGGCACGTAATTCACTGCTTTTTGTTGTTTTGTTTTTTTTTTTTTTCTGAATGATGG ..x.:..x......x:......x.:xx...x:.x.......:.x....x..............:...--..... 67M2I5M 56/72 77.8% 74/94230402 0.0% 2/72 2.8% 178664063 11550492 +3151 chr4 + 190214555 186152513 186152512 186152575 63 GAAGGCAAGCTTTTCTTTTCTTTTTGCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTT chr4 + 94230402 60095446 60095445 60095508 60095446 60095445 60095508 63 GAAGGTAGGATTAGCATTTATTTCTACTTTTTTTTTATCTTTTTTTTTTTTGGATGCAATTTT .....:.:.x..xx.x...x...:.:..........x.:...........x:....x.:.:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 126057067 64157488 +8188 chr4 + 190214555 186155993 186155992 186156196 204 TTCTTAGTGATGATGAATGTCTTGAACAAAAACCAGCTCAGCCCGGTAGGAAATGGCGCAAACTCGGACTTCCTCCTGTTTCCCCGCGTGACTGTGTCAAAGATGCCGTGGCAGCAGAAGTGTTTGATCACGTCTGGACAAATATGGTAGAACTTTTGGAAGAGCTGATTAGAAAACACTGGGAAACTACACTCACAGGTACTT chr4 + 94230402 63185586 63185585 63185789 63185586 63185585 63185789 204 TTATTAGTGGTGATGAGTGTTTGGAGCAAAAGAAAATACATGTTGCTGAGAAGAGGAATAAGCATGGCATTCCTCCTGTTTCTCCCATGGCTTGTATCAGAGATGCTGTGGCTTCTGAAATATTTGATCATATATGGAGTAATGTAATTGGAATATTGGAGGAACTGATTAAAAAACATTTGGAAACAAATGTCACAGGTATTT ..x......:......:...:.x..:.....:xx.::x..xx::.x.::...:x..x::..:.x:..xx.............:..xxxx.x:...:...:......:.....xx.x...:.:........::.x....xx...:.::.x.:.x.x.....:..:.......:......:.x......x.xxx.........:.. 204M 138/204 67.6% 204/94230402 0.0% 0/204 0.0% 122970407 67244148 +6288 chr4 + 190214555 186162829 186162828 186162956 128 TTTTTACTGTTCTCAGATTCATCACTTCTCCAGCAGTTTTTATAGTGACATGAATGGTGTCATGACAATTCAAGCAAAACCGCTTCAGCGGAGACCTGCCTATTTTGCTG------ACAGAACGCAGTACGTAT chr4 + 94230402 63187777 63187776 63187904 63187777 63187776 63187904 128 TTGTTGCTGTTACTAGGTTCACCACTTCTCCAGTAGCTTCTGCAGTGACTTGAAGGGAGTGATGACAATTCAAGCAAAACCACTCCAACAGAGGC------ACTTTGCTGCAGTACAAAAAATACAGTAAGTAT ..x..:.....x::..:....:...........:..:..:.::......x....x..x..x....................:..:..:.:...:.------.:.......------.x.:..::.....x.... 95M6D9M6I18M 95/122 77.9% 128/94230402 0.0% 12/122 9.8% 122975052 67239503 +3028 chr4 + 190214555 186176918 186176917 186176980 63 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCACGTGTGTTTCCTAGTAAGGTTCA chr4 + 94230402 65759992 65759991 65760054 65759992 65759991 65760054 63 TGTGAGTATGTATGTGTGTGCATACATGTCTGTGTATACATATGTACTACTTAATAGGATTTA ....x..:...:........::.:::...x....:..:..::...::.x.:..:..:.:..:. 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 120416926 69797629 +3104 chr4 + 190214555 186176919 186176918 186176963 45 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCACGTGTG chr4 + 94230402 79265519 79265518 79265563 79265519 79265518 79265563 45 GTGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTG .............::........xx...:.:.:...:........ 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 106911400 83303155 +10867 chr4 + 190214555 186196933 186196932 186197672 740 TTTCTAGTACTGGAAACAAATGGCGCTCCAGGAGAAAGATGTTAACACCCACTTTCCATTTTACCATTCTGGAAGATTTCTTAGATATCATGAATGAACAAGCAAATATATTGGTTAAGAAACTTGAAAAACACATTAACCAAGAAGCATTTAACTGCTTTTTTTACATCACTCTTTGTGCCTTAGATATCATCTGTGGTGAGTCTCATCGATCTGTTTCTAAATTTATGGCATAAAGA-GAAAATGGCCCAAACAGGAAATCACACTCCACCGGGAAGGCAAATGGGGGGACGG--------GAAAGGGTGACGGGCTCTTCAGCGCGGTTCTACGACCGCACTGGCCTTCTGAGGAGCAGCAGCCACGCCCAGGGCTGTGAGTGGGGCAGGCATGGAGCAACTGCCCAGGGAGGCGAAGGGAAGGAAGAACAGGAACAGGGAGTAGAAGTGGACCGTACAAGAGAAGAGG------GTAAAGGGAGGAAGAAGAATTCTGAAATATACAAGGACAAAGCAGGATGTACGTCTTT--------------------AGTG----TCTGCCGCTG----CAAAATAAACACGAGATA------------------ACT---AACGTGCGTGAATTGAATGGTTGCTTCTCACCCATATTTTATAGAAACAGCTATGGGGAAGAATATTGGTGCTCAAAGTAATGATGATTCCGAGTATGTCCGTGCAGTTTATAGGTAAATGGAGTCCTTTCAGTTATTTTAACAATTATTATTGATTTAGGCTTTAAAAATTATTGCTAACAAT chr4 + 94230402 63201476 63201475 63202206 63201476 63201475 63202206 731 TTTGCAGCACTGGAGACAAGTGGCGGTCACGGAGGAAGATGATAACTCCTACATTCCACTTTGCAATCTTAAATGACTTTCTTGAGGTTATGAATGAACAAGGGGGTATTTTGTTGGAGAAACTTGAGAAGCATGTTGACAAGGAACCATTTAATATCTTTACAGACATCACTCTGTGTGCACTTGATATTATCTGTGGTAAGTCC-----------TCTTCAGTTCTTGTGGTGGGGCTGTGAATGACGCAGATG----------CTC--------ATGAGTATAGTGGTACTGTGTTGTCTGAGGAGATGAATGTCTCTGCTTATTGTGTACAAGATCATCCTT-TCTCCTGGGG-------TCCATGTAACAGGCCATTGATCAGGTAAGCATTGAGCTGAGCTTGTGGGATGAGCAGGGCAGAAG---TAGGAATCTGCAGCAAGGTTTTGCTG---AGGAGCAGGGTTTCTGTGCATGGAAATGTAGATCAAGCTTGTAATTTAGAAAG--------GGTTGTGTGTATTTTCTTGTCAGATTGACAATGTGGTGGCAATCAGAGGCTGGGAGCAATATTAACACTGTGTACCAGGAACTCTGCATTCAACTTTGAACTTGTGAAACACTGATAATTTCCTCC----------TTCTAGAAACTGCAATGGGCAAGAATCTGGGTGCTCAAGACAATAAGGATTCTGAGTATGTTCGTGCTGTCTACAGGTAAGTGGAGATTCTTCCTTC---------ACTACTCTGTAATTAGGTT---AGAATTGTTGCTGCCAGT ...x:..:......:....:.....x..xx....:......x....x..:..x.....:...:.x..::.::.x..:..::.x..x:.:.............x:::...x...x.x:..........:..:..::..:..x.:...x.......:xx....x:xx..........x.....x:.x.....:.........:....:-----------.::.x.:..:x..xx:.:::.x-.x:....:.x..:.::----------...--------.x.x:x..:.x..x..x.--------..:::.:...xx.x....x.xxxx:.xx.x:.x..:.::x..x-:..:...:..-------x...:.:xxx:...::.x::.x:..:.:....x....x:xxx::xx....x.x.x....x..:.:---:.....:xx.x..:.:::x.xx:.:.---.:...x..:.x------.:.x:.::.x.x...xx..x::..x...x..x..:.--------..x...::..x...--------------------:...----..x.xx....----...x..x.....x:x:..------------------...---...x..:.x:.xx:x:..::..x.:..:----------..x.......x..x.....x......x.x.........:::...:.x.....:........:.....x..:..:......:.....x:::...xx.:---------.:..:.x.xx.x.....:.---.:....:.....:x..:. 206M11D22M1I16M10D3M8D18M8I43M1D10M7D65M3D26M3D11M6I36M8D14M20I4M4I10M4I18M18I3M3I28M10D97M9D19M3D18M 425/667 63.7% 731/94230402 0.0% 137/667 20.5% 122995457 67219098 +5258 chr4 + 190214555 186201167 186201166 186201345 179 AACGGGCCAATGAAATGAACGCCAATGAAGACTGTAGAGGTGATGGCAGGGGCTCTGCCCCCTCCAAAAATAAACGCAGGGCCTTTCTTGACTTGCTTTTAAGTGTGACTGATGACGAAGGGAACAGGCTAAGTCATGAAGATATTCGAGAAGAAGTTGACACCTTCATGTTTGAGGTA chr4 + 94230402 63204198 63204197 63204349 63204198 63204197 63204349 152 AACACGATACTGACGTGAACACTGAAGAAGA------AAGTGGT------------------TCCAAAAAGAGA---GAAGCTTTCTTAGACATGCTGCTGAATGCCACAGATGATGAAGGGAAAAAACTCAGCTACAAGGACATTCGTGAAGAAGTGGATACTTTTATGTTTGAGGTA ...:x.x:.x...x:.....:.::.x.....------.:...:.------------------........x.:.---:::..:..::.x...x....x:.:.:..:x..x.....:........x.::..x..::.::.:..:.....x........x..:..:..:............ 31M6D7M18D12M3D102M 106/152 69.7% 152/94230402 0.0% 27/152 17.8% 122996969 67217586 +3028 chr4 + 190214555 186202643 186202642 186202714 72 TATGCTCATGCACATACACATGCACAGACACATGTATATACCAACATACACACATTCACATATACACACATA chr4 + 94230402 7596607 7596606 7596678 7596607 7596606 7596678 72 TATACCTATAAACACACACATGCACAGATTCATATATACATAAACACAGAGACTTCCAAGTACATATTCACA ...:.::..:x...:.............:x...:....:.:x....:.x.x..x.:..x:..:.:.:x..:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 178606036 11608519 +3338 chr4 + 190214555 186203029 186203028 186203112 84 CATGCGCATATACACATACATAGATGCACATATATACACACATGCACACATA-AATGCACACAGCTATGTACACTCGTGTACATA chr4 + 94230402 23247721 23247720 23247805 23247721 23247720 23247805 85 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ....:.::...:....:....xx...x......:.........:......:.-..x.x.x.x..:..::.:x.:xx:.:..:... 52M1I32M 58/84 69.0% 85/94230402 0.0% 1/84 1.2% 162955308 27259247 +6709 chr4 + 190214555 186205193 186205192 186205336 144 TTTGTAGGGGCACGATACAACTGCAGCTGCAATAAACTGGTCCTTATACCTGTTGGGTTCTAACCCAGAAGTCCAGAAAAAAGTGGATCATGAATTGGATGACGTGTTTGGTATGT----TTGGCCCCTTCACTGGTTATATTGTGGT chr4 + 94230402 63205784 63205783 63205931 63205784 63205783 63205931 148 TTTTTAGGGTCATGATACAACAGCAGCCGCTATGAACTGGGTCCTATACTTGCTTGGTCATCATCCTGAAGCCCAGAAGAAGGTTCACCAAGAACTGGATGAGGTGTTTGGTATATATTCATTATTCCTTCATTGGGGTTATGGTGGT ...x.....x..:........x.....:..x..:......x:.:.....:..:.x...:x.x.:..x....:......:..:..xx.:..x...:.......x...........:.----x.x:::......:...xxx...x..... 116M4I28M 106/144 73.6% 148/94230402 0.0% 4/144 2.8% 122999409 67215146 +11628 chr4 + 190214555 186208848 186208847 186209279 432 CTACTTGCTTTCATC-AGGGAAGTCTGACCGTCCCGCTACAGTAGAAGACCTGAAGAAACTTCGGTATCTGGAATGTGTTATTAAGGAGACCCTTCGCCTTTTTCCTTCTGTTCCTTTATTTGCCCGTAGTGTTAGTGAAGATTGTGAAGTGGGTAAGTA---------------------TGCTATACCTA-----------------------------AAGTAGAAGGGAG------------------------------------AGGGAAA---------------CTTTCTAATGTCTA-CCTTGCTCCGGTCTCATAATGTATTGACTACTTCT------------TGACAGCAGGTTACAGAGTTCTAAAAGGCACTGAAGCCGTCATCATTCCCTATGCATTGCACAGAGATCC-GAGATACTTCCCCAACCCCGAGGAGTTCCAGCCTGAGCGGTTCTTCCCCGAGAATGCACAAGGGCGCCATCCATATGCCTACGTGCCCTTCTCTGCTGGCCCCAGGAACTGTATAGGTTTGTA chr4 + 94230402 63206234 63206233 63206780 63206234 63206233 63206780 547 CTATTTTCTTTTGGCTAGGCAACGCAGAGCGTCCTGTTACAGTGGATGATTTGAAGAAACTTCGATACCTCGAGTGTGTTGTGAAAGAAGCCCTGAGGCTCTTCCCTTCAGTTCCCATGTTCGCCCGTTCCTTGCAAGAGGATTGCTATATTAGTAAGTAACATTCAGTTTTGCTGATGTTTGCCACTTCCATTCCAGCAGTTTTAGAAGAAGTGTTTCCCAAGTAAAGGACAGGTATTTTGTTTGTTTATTTAACTGTGTGGTTGTTTAAAGGAAATCACTTCCCCCCAACCCCACTGTTGTTTAGCTTTGGTTTTTTTTGTTGATTTTTTTTTTCCTTCTCTCCTTGTTTTCTTTCAGGTGGATATAAGCTACCAAAAGGCACGAATGTCCTTGTCTTAACTTATGTGCTGCACAGAGATCCTGAGAT-CTTCCCTGAGCCAGATGAATTCAGGCCTGAGCGCTTCTTCCCTGAAAATAGCAAAGGAAGGCACCCATATGCTTATGTGCCCTTCTCTGCTGGCCCCAGGAACTGCATTGGTACGTA ...:..x....::x.-...x..xx.x..x.....:.:......:..x..::.............:..:..x..:......:.x..:..::....xx.x..:..:.....x.....:x.:..:......xx:x.xx:x..:.....:x.x:.x:.......---------------------...:.:x:.:.-----------------------------.....:.:.:x..------------------------------------.:.....---------------.::x..:x...:..-.:...x.::xx.:.xx.:..x.x..xx:.x.....------------.xx...xx..x..:.::x.x.:.........x:.x.:.x.::..x.xx.:....:::.............-.....-......::.x..x..x..:...x:.........x........:..:...:xxx....:x.x..:........:..:.............................:..x...x:... 15M1I144M21I11M29I13M36I7M15I14M1I35M12I70M1I5M1D117M 299/431 69.4% 547/94230402 0.0% 117/431 27.1% 123002614 67211941 +7663 chr4 + 190214555 186210459 186210458 186210623 165 TAATTTGAAGGTCAAAAGTTTGCTGTGATGGAAGAAAAGACCATTCTTTCGTGCATCCTGAGGCACTTTTGGATAGAATCCAACCAGAAAAGAGAAGAGCTTGGTCTAGAAGGACAGTTGATTCTTCGTCCAAGTAATGGCATCTGGATCAAGTTGAAGAGGAGA chr4 + 94230402 63207472 63207471 63207636 63207472 63207471 63207636 165 TAATCCACAGGCCAACGCTTTGCACAAATGGAAGAGAAAACTCTTCTAGCCCTCATCCTGCGGCGCTTTTGGGTGGACTGTTCTCAAAAGCCAGAAGAGCTTGGTCTGTCAGGAGAACTAATTCTTCGTCCAAATAATGGCATCTGGGTTCAACTGAAGAGGAGA ....:::x...:...x:x.....xxx:........:..:..:x....xx.x:x.......x...:.......:.:..x.x:xx:..:..:xx...............:xx....x.::.:.............:.............:.:x.::........... 165M 117/165 70.9% 165/94230402 0.0% 0/165 0.0% 123002987 67211568 +3934 chr4 + 190214555 186215310 186215309 186215455 146 CTTTCTTTCTCTTTCTTTCTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCC------TTCCTTCCTTCCTTCCTTCTTTCCTTGCTTTCTTCTTTCTTTCCTTGCTTTCTCTCTTGCTTTCTCTCTCTCTCTCCTTGCTTGCTTGCTTTCC chr4 + 94230402 21408807 21408806 21408948 21408807 21408806 21408948 142 CTTTTATTTTCCTTTTTACTGGTTCTTTCTATTT---TATCTTTTTCTTTCAGACTGATTCCCCCCCTCCTCCCTGCAAAC-------TATTCTTTCTTTTCTTTCTTTCCCCCTTGGCTTCACTGCAGGTCTGCTTTTCTTCTTGCCTTTC ....:x..:..:..:..x..xx........x...---.x::.:........x------....::..:....:...x.xxx.-------.x..........:...x.....:.:....x:...x..x:xxx...x...x::.x.....:..:. 34M3D15M6I23M7D64M 94/136 69.1% 142/94230402 0.0% 16/136 11.8% 164806503 25408052 +13287 chr4 + 190214555 186250239 186250238 186252255 2017 ACAGGTTGCCACATGAACATCTTCCAGCATCTTGCGTTCTCAGATGTGGATGTTGCCAGGGTTCTCACTCCAGATGCTTTTGTGTGTCGGACCATCTGCACCTATCACCCCAACTGCCTCTTCTTTACATTCTATACAAATGTATGGAAAATCGAGTCACAAAGGCGAGTATG--------------CATGGAAAAT--------------------CGCATCACAAAGGCGAGTATGCATGGGGAGCACTTGCTGCTGTACTTTCATCACTTTTATAGTCTGAGTTCTTAAAAGTTTC--------GTTCATTTCCCTCAAAACACTTGAACCTGCAGTTTCAGTAGGTACTGTTCTGCCAGGTGCAGATTAGTTAAGAGATTAGCAGACTTCTCTGCCTATCTTCTCTTACTTTAAAACAAATG-----TTACCATTGAATCAAGGAA--GCAATAGCCATGAGAAAAAAGAAGGATCTGACGCCTTTGAATGAAGATTCAAAACATGATCTTCATGTTTTGTATTAGCTTGGAGTAAAATCCACTTGCTGGCAATATAGCCCTTAAGCTTGTTGCCTCTTCTCTTTGTTTCAGAAACTAGAGCCCTGTTTATTCTGATCAAGGCTCTGGCCCACTGTCTTTATCTCAGATAACCCACCCTCTTCTGCACACAGCATGGAGCTAAGAGAAGGGTGTCTAGTTATGTAATA--------TCATCGGCAGCATAAATTCCCAGAATTTGTTCTTTGATTTTTTTGTTTGTTTTTCCAGTTAGAAGGTGGAACTTCATCATTGTCCTCTTTTCAGGTTGTCTGTGCCTATT------AGTT----TTCTCCAGAGGGAGAGGTGG-----------CTTGATTTACATTTAATCTCTGCAATT-------------------TATTAGAGTCCTGTAGTTGGATTTACTTTGAAGAGAGTTTCCCA--GAAGAATAAAATTTGCTGCGTTGCTTTTTGGGTGTGAGCTGCTTTTGTATTTGCCTAA-------TGCCTTTAATGCAAATTTCTTTCTTTCTCTCTTGCTTTTTTTTAAAAAAAATAGAAATGTTTGTCTTCTTAAAACATCTGAAAGTGGCACACCAAGTTCCTCTACTCCTCAAGAAAACACCATATCTGGATATAGCCTTTTAACCTGCAAAAGAACTTTACCTGGTAATGTGATTTGATAATAATATTACATAAAATGTAACCTATTTCATGACTTTTAACAGCAACAGTGATGAAACAATCCTCAAGGTAACAGAAACTTGTGTAAATGTCGTTCATTGCTTTTCCCATCTGATATCTTTTTGTGTTTATAATTGACACAGAACCCTGCCATTCTAAAATTTACCCGGGAGTTGACTTTGGAGGAGAAGAATTGAATGTGACTTTTGTTAAAGGAGTGAATGTTTGCCAAGAGACTTGCACAAAGATGATTCGCTGTCAGTTTTTCACTTATTCTTTACTCCCAGAAGACTGTAAGGAAGAGAAGTAAAGGAAATTTTATTTTTCAAAGACAGTTGACATGACCATTTCATATTCTCTTTCCCCCTGTGAAG-----GCTTACTCTTTCTA-CTGTTCATTTCATCTAGGTGTAAGTGTTTCTTAAGATTATCTATGGATGGTTCTCCAACTAGGATTGCGTATGGGACACAAGGGAGCTCTGGTTACTCTTTGAGATTGTGTAACACTGGGGACAACTCTGGTGAGTAA-------------------------------------------------------CCTCACTTTTTCGTGGACCTGTC-----------------------------AGGGATGTCTGTC-----------------ATGTTGATAGTTTGCT-TAGTCTT-------------------------------------AAGGAATTAT-GTGTCTTGTTCTCCTTGGTTAGAAGGGACTTTGAT-----------------TCACTTCTAATTCC----------AACCATTAGCGTCAA---------CGCTCTCTTTTCAGTCTGCA--CAACA----AAAACAAGCACACGCATTGTTGGAGGAACAAACTCTTCTTGGGGAGAGTGGCCCTGGCAGGTGAGCCTGCAGGTGAAGCTGACAGCTCAGAGGCACCTGTGTGGAGGGTCACTCATAGGACACCAGTGGGTCCTCACTGCTGCCCACTGCTTTGATGGGTAAGTGTTGGATGCATCTCATCCAGAGTCTTATCTTGGCTTTTCATTTTGAAGGATCTATGATCAGCTG chr4 + 94230402 63222799 63222798 63224842 63222799 63222798 63224842 2044 ACAGATTGTCAAATGGACATTTTTGAACACGAAGAATTTTCAGGAACGAATGTCACAAGTTTTTTCACTCCAGACACTTTTGCCTGCCAAACTATTTGTACTTATTTTCCAAACTGCTTGTTCTTTACATTCTTCACCAAGGAATGGCAAATAGAATCCCAAAGGTGAATTTGATAACTTTAAAGTCTCTGAAAGATATTTTaaaaaaacaaccagacgaaacaaacaaacaaacaaaAAAGAACCCCAATCTTAGCCTT--TTTGATCACCTTTTTATTAT--ATTCTTGGAAATTATTGTTAAAGGTTTATTTTCTGTAAAACA---------GCTGTttt--ttgtttttgttttgttttgtgt----------------------ttttgttttgtttttttttttTACTGTGTTGCATCTGTACATTTATAATTTCCTATGGGTATTTCACTTGTCCTATGGTATGAGCAGGA--------------------ATCTTGTACTTCAGCTGTATATCTGGTGTTAATCTGAAAAGAGATATGTTCGGCAAAGAGACAGCCTTTATG-----------------TTGTTTTGATAACTTAA----CGCTGAATTTTATAAA-----------ATTGTC--------------------------------------------AAGAGA----TGTCTAATTTCCTAGCAGGATTAAGTTATTTACTTGAAAAGCTTTTGAATCAAGCTACCGGATTTGAAAGTATTTCTTTTTA-----AAGACTGAAATTCTT--------TCTTTTATGATTAGCGGTGAGGAGTCAAAAAAGTTACAGTCCACAGAAAACAGAGGTGGAAAGAATAGTATTTCAATGAAACTGAAGCTTCTAAATTAACAGTGAATTCATTTTCGTATGAAATACTTCTACCGATACAAACTTTGGAAAAAAAAGCACATTTAAGAAAGAGCTCTCCCTTACCAGTATCTGAAACATAAATGTTAGAATATAAGAACAAATTCAATTACTTTTAAT-----TTTTTttattattattattatttttatt-------atAGAAATCTTTGCCTCCTGAAAACATCAAGAAGTGGAATACCAGAGGCACTTACGTTACGAGAAAATGCTATTTCAGGTTTTGGTCTCCTAAATTGCAGAAGACACTTTCCTGGTAA---------AAAGTAA-ATTACAATAAAATTCAACTCTTGCATTAAT-------------GAAATGAATAGATCT--------ACTGATGCTTGGAACA----CGCTCATTCTT------------------------------------ACAG---CCTGCAATTCTCGCACTTACGTGCATATGAATTTTCTGGGAGATGAACTCAATGTCACTTATACTAAAGGACACAGAGCTTGTCAGCAGGTTTGCACAGACATGATCCGCTGCCAATTTTTTACCTACTTTCCCCTCCAAGAGGCATGCAATGAGGAAAGGTGAG---------ATTTCTTAGGGAAGG----------CATCTAATGTATGCGCTCTCTATAAGAAGTATAAACTGGATCTTTGCATTTATTTATTGTCAGAAAGTGTGAGTGTCATCTAAGAATGTCCTCAAATGGATCTCCAGTGGAAATACAACACGGTCCAGGAAGGATCTCTGGATACTCACTAAGACTATGTAAAAAAAAGGCCAGTACTGGTAAATAAAACTTTCCTTTTAAAGAGATTTTTAAACTGATTTTGGTACAGGAAACCTAAGCCCTCCCATTTTTTTTTTTTCTTTTCTGAATTGAAGATAAAGAGTATACTAAAAAAGTGAAGTCTGTCCAGCCTGCATACTGCAAACACAGACAGTACCCTGTAAACTTCTTTAAATTGGATTTTATGGTTAAAAAAAAAATTGTAAAGGGATTAGAATGTCTAATGTTCTTTGCTTAAGATTGACTCCTATTTGCAGGTTAGCAGTAGTCACATCTTTTTTCTTGGCCAAATAACAATTATCTTTAAGCAGTTTTCAATTATTTCTGTAGTATGTATGCAGCATTCTTCAAGAAATATTAGGATAATTGGAGGGACGGACTCTTCCCCTGGTGAATGGCCTTGGCAAGTGAGCTTACATGTGAAGCTATCTCGCCAGAGACACCTCTGTGGAGGCTCTATCATCAGTAACCAGTGGATCCTTACAGCTGCCCACTGTTTCATGAGGTGAGTCCTAAATGTAAATTAAC---------ACATAAAATTTTCATCC---AGTATCTGTGATTAGTTG ....:...:..x...:....:..:x.:..:xxx.x:..:....:x::.:....::.x..xx..:..........::......:x..:.::..:..:..:..:...:x:..x......:.x.............x:..x..x.x....x....x..:..x......:..:.x..--------------:x..:..:..--------------------..x.x..x.x.::.:.::.x:x.x.::xxx..x.:x:x..:x.--...x.....:...x..x.x.--:.....::..:..x:--------...:....:.:x:......---------..x....:--.x.x.x:....:..::xx...:----------------------x:..x.:.xx:.x.:..:.:.....x.:xx:..xx..-----...:x...xxx.xx:..x.--x..x.x.:.x.:x.:x.x:..x....--------------------..::x:x..x.x.x..x:..:.:.x..:...:::..:.:x:.:..x:::.:.x:::x:.x.:....:...x.-----------------......:::x....x:.----:.:.x.x.:.x..x..-----------.:....--------------------------------------------......----......:..x:x..::.--------.:..:x:.xxx.x..::.:::::.x:xx.:.x::x.....xxxx..x.x.:...::.-----...::x...x...x.--------......xx.:..:x.x...xxx.x.------....----.:.x.x::.::x........-----------:..x.x.x.x.:.x..x..::xx....-------------------...x.:.xx.:.x..x:x:x.:xx......:.:.:.:xxx.x..--x.....x:.:x.:.x.:x:::::x.x.:..::xxxx.:x..:.xxx:...xx.xx:..-------.:.:......-----...:...x..x:.x.:x.xx.....x..-------........x....:..:..x........x::......x.:....::xx.x::...x::x.:......::.:..x..x..x.x.:.:..::...x:....:....xx:..x........---------.x.:...-......xx...xx.x.x..x..x...x.x.-------------.x:.....xx:...:--------..x..x:....x:xx.----..:.....x:.------------------------------------....---.....x.....x:x.:....x:.x:x:.x:.:...xx:.....x...:.x.....x....x.::.......xxx.:x.:...:..:x..::.......:.x.....:.....:..:.....:..:..:.:.::x....x...:.xx..:..x..:..:.:..:.:---------....:.:.::..x:.----------...:.x..:.x:x.x:..:.:x.:x....-----:..x:x.....x:.-:.:..:...x:xxxx.:....:.....:x::.....x.:..:x:::....x......::x:::..xxx::.:..xx..x:.:...x......x.....x:.:...:.:.....x.xx::..x..::x.....:.:...-------------------------------------------------------:.:..:.....:x.xxx.:.x..-----------------------------..x..x.......-----------------.:::x..:...x:x..-..:x...-------------------------------------....:....x-:.....x:.x:..:...x...::.xx....::x..-----------------....x...xx..:.----------...x....x.x.:..---------x::.x.:.:.x:...x..:.--..:..----xx..x..::.:xx.x..x:.......:..::.......::xx..x..:.....:.....:......:.:..x........:x.xxx:.....:.....x........x..xx....x:.xx........:....:..x...........:..::xx:...:...x:.::...:.xx.:.x.---------.:x.x::x.......::---..x....:....:..:.. 173M14I10M20I43M2D20M2D15M8I19M9D8M2D22M22D37M5I19M2I26M20D72M17D17M4D16M11D6M44D6M4D17M8I57M5D15M8D25M6I4M4I20M11I27M19I44M2I58M7I10M5D28M7D118M9D7M1D30M13D15M8D16M4D11M36D4M3D165M9D15M10D29M5I14M1I138M55I23M29I13M17I16M1I7M37I10M1I35M17I14M10I15M9I20M2I5M4I181M9D17M3D18M 1069/1750 61.1% 2044/94230402 0.0% 561/1750 32.1% 123027440 67187115 +3697 chr4 + 190214555 186252068 186252067 186252191 124 GGGGAGAGTGGCCCTGGCAGGTGAGCCTGCAGGTGAAGCTGAC------AGCTCAGAGGCACCTGTGTGGAGGGTCACTCATAGGACACCAGTGGGTCCTCACTGCTGCCCACTGCTTTGATGGGTAAGT chr4 + 94230402 56600409 56600408 56600538 56600409 56600408 56600538 130 GGGGCGGTTGGCCATGGCAGGTTGCACTCCGATTTAAATCGTCTCATGGAGATGGAAGACTCTTGTGTGGTGCTACTCTCATTAGTAGCTGCTGGGTCCTCACTGCTGCACACTGCTTTAAAAGGTTGGT ....x.:x.....x........x:xx..x.::x.x..:::.x.------..x.x::..:.x.:.......x.xxx.x.....x:.xx:.::x.................x.........:.x:...x:.. 43M6I81M 81/124 65.3% 130/94230402 0.0% 6/124 4.8% 129651659 60562896 +4052 chr4 + 190214555 186255436 186255435 186255552 117 GTGCACCTGTAGTCCCAGCTAGTCAAGAGGCTGAGACAAGAGGATCTCTTGAGCCCAGGAGCTCAAGGCTGTAGTGAGCCAAGATCGTGCCACTGCACACAAACAATTATGTGACCT chr4 + 94230402 76033204 76033203 76033305 76033204 76033203 76033305 102 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGC---------CAAGCAGATGTGTGCCCT ......x......:.......x.::.:........x.xx.x.:.x.x.....:.....:....:x:........------..x..x:...---------...:..:x.:....x... 74M6D10M9D18M 76/102 74.5% 102/94230402 0.0% 15/102 14.7% 110222232 79992323 +6978 chr4 + 190214555 186257221 186257220 186257465 245 CACAGGTGAAATCCAAAATATTCTACAAAAGGTAAATATTCCTTTGGTAACAAATGAAGAATGCCAGAAAAGATATCAAGATTATAAAATAACCCAACGGATGGTCTGTGCTGGCTATAAAGAAGGGGGAAAAGATGCTTGTAAGGTAACTCATGAGATTATGAAAAACACAATAGGCTGC------TTGAGAAAATTCATTTCAAAATATATTTTCCAATAGCATAATTCAAT-CATAGTTTTTAAAAAAA chr4 + 94230402 63229429 63229428 63229667 63229429 63229428 63229667 239 CATAGGTCGTGTAGAAGATATTCTTCAGAAAGTTACTGTTCCCCTAATGTCAAAAGAGGAATGCCAGGCAAGATACCGGAAGCGCAGAATAGATGACAAAGAGATCTGTGCTGGCTATGATGAAGGTGGAAAGGATGCCTGTAAGGTAAC-----------AAAAAGATGTCATATACTGTCATATATTTCAATAATTTGTTTGAATATATAATTG--AATAACATAATAAAATGTTTAGTTTTCATAACAA ..:....x:x:.xx..:.......x..:..:..x.x.:....::.::.:x....x..:.........:x......:.:::.x:::.:....:x:x.xx:::x.:..............:.x.....x.....:.....:...........-----------x:...:.:::x...x:...:------..xx:.x....::...x..x.....x..x--....:......xx...-:x.......:.x..x.. 150M11D20M6I29M2D16M1I17M 155/232 66.8% 239/94230402 0.0% 20/232 8.6% 123027792 67186763 +8465 chr4 + 190214555 186258002 186258001 186258169 168 TTTTTCCACTGTGACTCAGGGAGATTCAGGTGGTCCCTTAGTTTGCAAACACAATGGAATGTGGCGTTTGGTGGGCATCACCAGCTGGGGTGAAGGCTGTGCCCGCAGGGAGCAACCTGGTGTCTACACCAAAGTCGCTGAGTACATGGACTGGATTTTAGAGAAAAC chr4 + 94230402 63231060 63231059 63231227 63231060 63231059 63231227 168 TTTCTGTCCTGTGATGCAGGGAGATTCTGGAGGACCACTGTCATGCAGGCACGAGGAAGTGTGGTATCTGGTGGGCATCACTAGTTGGGGTGAAGGCTGTGCTCGGCCCCAGCAGCCAGGAGTCTACACAAAAGTTGTTGAATTTTCAGACTGGATTTTGGAAAAAAC ...:.x:x......:x...........x..x..x..x:.:x:x....::...:.x.:.:.....::.:.............:..:.................:..xxxxx....:..x..x........x.....:.:...:.x:x::...........:..:..... 168M 122/168 72.6% 168/94230402 0.0% 0/168 0.0% 123026942 67187613 +4555 chr4 + 190214555 186258057 186258056 186258176 120 GGAATGTGGCGTTTGGTGGGCATCACCAGCTGGGGTGAAGGCTGTGCCCGCAGGGAGCAACCTGGTGTCTACACCAAAGTCGCTGAGTACATGGACTGGATTTTAGAGAAAACACAGAGC chr4 + 94230402 5038402 5038401 5038519 5038402 5038401 5038519 118 GAAACCTGGTTTCTGACGGGGGTCACCAGCTGGGGCGAGGAGTGCGCCAAGCCGGGCAAGTACGGCATCTACACCAATGTCGCCAAGTACATGAAGTGGA--TCAGGGAAACCACGAGGC .:..:x...:x.:..::...x:.............:..:.:x..:...x:xxx..:xx.::x:..::..........x.....::........:.x....--.:..:....x...:::.. 100M2D18M 78/118 66.1% 118/94230402 0.0% 2/118 1.7% 181219655 8994900 +3318 chr4 + 190214555 186265520 186265519 186265599 80 AGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAA------GAAGAAAGAAAGAAAAGAAAGAAAGTAAGAAGCA chr4 + 94230402 38078778 38078777 38078863 38078778 38078777 38078863 86 AGTAAGAAAAAGGGAAAGAAAGAAAAAGGGGAAAGAATGCAAGGGAATTGTCACAGAGAAAATGGAAAAAAAAAAACCCATAAGCA ..x......:..:............:.::.:......x.x...::.------:x...:.:..x.:...:...:...x:x.x..... 46M6I34M 57/80 71.2% 86/94230402 0.0% 6/80 7.5% 148186742 42027813 +8008 chr4 + 190214555 186271596 186271595 186271790 195 TACTACATCACAGAATGTGTGACTCAGTTGTTGAAGGACACCTGCTTTGAAGGAGGGGACATTACTACGGTCTTCACACCAAGCGCCAAGTACTGCCAGGTAGTCTGCACTTACCACCCAAGATGTTTACTCTTCACTTTCACGGCGGAATCACCATCTGAGGATCCCACCCGATGGTAA-ATGCTTATGTTTCTA chr4 + 94230402 63216997 63216996 63217192 63216997 63216996 63217192 196 TATTTCATATCAGAATGTGTGACGCAGATCTATGAAAATACTTACTTTCAAGGAGGAGACCTCACTACGGTTTTCACACCAAGTGCCAATTACTGTCAAATAGTTTGTACTTACCATCCTACCTGCCTGTTCTTCACATATTTGCCAGTGACATGGACTAAAGATCCTGCACAGAGGTAATATGTTAATATTCTTA ..:.x...xx.............x...x.x.xx:.::.:..:.:....x.......:...x.:........:...........:.....x.....:..::....:..:........:..x.xx..::.::.......x.x:x:.x.:.x:x..:x:x..:.:.....::.x.::x.....-...:.x..:..::.. 180M1I15M 133/195 68.2% 196/94230402 0.0% 1/195 0.5% 123054599 67159956 +5713 chr4 + 190214555 186273064 186273063 186273185 122 AAAACAGGTTTACTTGTGTCCTGAAAGACAGTGTTACAGAAACACTGCCAAGAGTGAATAGGACAGCAGCGATTTCTGGGTATTCTTTCAAGCAATGCTCACACCAAATAAGCGGTAAGATA chr4 + 94230402 63217786 63217785 63217907 63217786 63217785 63217907 122 AAAACAGGTTCTCCTGCTACTTAAAAGACAGTGATACTGAAATGCTACCAAAAGTGAAGATGGAAGGAGCTTTTTCTGGACATTCTTTAAAACAATGCAACATCAAAATTAGTGGTAAGATA ..........:x.:..:xx.:.:..........x...x....::..:....:......x.x.:x..x...xx.......::.......x..:......xxxxx.x....x..:......... 122M 89/122 73.0% 122/94230402 0.0% 0/122 0.0% 123055278 67159277 +6037 chr4 + 190214555 186274091 186274090 186274251 161 TCATGTCTTCTGCTTTTATTTCCAGCTTGCAACAAAGACATTTATGTGGACCTAGACATGAAGGGCATAAACTATAACAGCTCAGTTGCCAAGAGTGCTCAAGAATGCCAAGAAAGATGCACGGATGACGTCCACTGCCACTTTTTCACGTACGCCACAAG chr4 + 94230402 63218959 63218958 63219119 63218959 63218958 63219119 161 TTATCTATTCCTTTTTTTTTCACAGCTTGCAGTCCAGATGTCTACGTAGGATTGGATATGCAAGGGGTAAATTATGACGTTAGTGTGGCTGACAGCTATCAACAGTGCCAAAAAAGATGCACCAATGACAAACGCTGTCATTTTTTTACATACGCCCCAGG .:..x.x...:x:....x..:x.........::xx...::.:..:..:.:x:.:..:...x.:..x:....:...:..:x:xxx..x..::.x..:xx....x.:......:..........x:.....:xx.:...:..:.....:..:......x..:. 161M 104/161 64.6% 161/94230402 0.0% 0/161 0.0% 123055132 67159423 +3766 chr4 + 190214555 186275355 186275354 186275437 83 CGCGGTGGTGGGCGCTTGTAATCCCAGCTACTTGGGAGGCTGAGACAAGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:.:......--.:.x....:.:...........::........x.xx.x...x.:...........:..x:xx:..:..:.. 10M2D71M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 110242158 79972397 +5222 chr4 + 190214555 186276198 186276197 186276394 197 TTGAGTCCCTGACATAGTTCTTCCGTC--GCGCAGCTTGTATTAGGGACATTTTCCCTAATACGGTGTTTGCAGACAGCAACATCGACAGTGTCATGGCTCCCGATGCTTTTGTCTGTGGCCGAATCTGCACTCATCATCCCGGTTGCTTGTTTTTTACCTTCTTTTCCCAGGAATGGCCCAAAGAATCTCAAAGGTAA chr4 + 94230402 63222768 63222767 63222966 63222768 63222767 63222966 199 TTGGAATTTTGATATTCTTCTCTTGTTTTATACAGATTGTCAAATGGACATTTTTGAACACGAAGAATTTTCAGGAACGAATGTCACAAGTTTTTTCACTCCAGACACTTTTGCCTGCCAAACTATTTGTACTTATTTTCCAAACTGCTTGTTCTTTACATTCTTCACCAAGGAATGGCAAATAGAATCCCAAAGGTGA ...::x:::...:..xx....:::..:--:::...x....xxx.x.........:xxxx.::x:.x:...x...:x.xx..::..:xx...x.:x.x:....x..::......:...:x:xxxx..:..:...:..:x...x:::........:.....x.....:x..x.........xx.x......:.......:. 27M2I170M 120/197 60.9% 199/94230402 0.0% 2/197 1.0% 123053430 67161125 +3422 chr4 + 190214555 186279252 186279251 186279324 73 TGTGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x....:.:.........::.:........x.xx.x...x...........:.:..x:xx:..:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 110246047 79968508 +11659 chr4 + 190214555 186279999 186279998 186280608 610 TTGTTTTTGTTA--GAAATCTTTGTCTCCTTAAAACATCTGAGAGTGGATTGCCCAGTACAC--GCATTAAAAAGAGCAAAGCTCTTTCTGGTTTCAGTCTACAAAGCTGCAGGCACAGCATCCCAGGTAAACTGAGAGTT---------CTGCATTCTGGC-----TGAGAGTGACCAGCCCCGAGGAGGCT-GATACATGCTGAGGGAGGGTCTCACTCTGACATGTGGTCTGCTGTCTAGTGTTCTGCCATTCTTCATTTTACCATGACACTGATTTCTTGGGAGAAGAACTGGATATTGTTGCTGCAAAAAGTCACGAGGCCTGCCAGAAACTGTGCACCAATGCCGTCCGCTGCCAGTTTTTTACCTATACCCCAGCCCAAGCATCCTGCAACGAAGGGAAGTAAG---CCATATGAAGGG----TTATGCAGACACCCTTGTCCCGTCTGCCTGTGAGGTGCAT------TATGTTTATACCGTTTTGTTTCCAACTGCAGGGGCAAGTGTTACTTAAAGCTTTCTTCAAACGGATCTCCAACTAAAATACTTCACGGGAGAGGAGGCATCTCTGGATACACATTAAGGTTGTGTAAAATGGA------TAATGGTGAGTATAATGTCACTTGAAAAAATAT chr4 + 94230402 63223708 63223707 63224306 63223708 63223707 63224306 599 ttatttttattatAGAAATCTTTGCCTCCTGAAAACATCAAGAAGTGGAATACCAGAGGCACTTACGTTACGAGAA--AATGCTATTTCAGGTTTTGGTCTCCTAAATTGCAGAAGACACTTTCCTGGTAAAAAGTAAATTACAATAAAATTCAACTCTTGCATTAATGAAA-TGAATAGATCTACTGATGCTTGGAACACGCT------------CATTCTTACAG-------------------CCTGCAATTCTCGCACTTACGTGCATATGAATTTTCTGGGAGATGAACTCAATGTCACTTATACTAAAGGACACAGAGCTTGTCAGCAGGTTTGCACAGACATGATCCGCTGCCAATTTTTTACCTACTTTCCCCTCCAAGAGGCATGCAATGAGGAAAGGTGAGATTTCTTAGGGAAGGCATCTAATGTATGCGCTCT------------CTATAAGAAGTATAAACTGGATCTTTGCATTTATTTATTGTCA---GAAAGTGTGAGTGTCATCTAAGAATGTCCTCAAATGGATCTCCAGTGGAAATACAACACGGTCCAGGAAGGATCTCTGGATACTCACTAAGACTATGTAAAAAAAAGGCCAGTACTGGTAAATAAAACTTTCCTTTTAAAGAGAT ..:.....:...--..........:.....x........x:::......x.:..x::x:...--:.:...x:.::.--..x...x....x.....::....x.x..::.....:x:xx:.x.:..x......xx.x:.:..---------:.xx.:...x..-----...:.-...x:..x:.::xx..x...-.:x...:...------------..:...x...x-------------------:....x.....:xxx:....xxxx.:.:x:....::.......x.....x:..:.:::.xx.:.x...:.x...:::..:..:...x.:x.x.....x:.:::x:..........:...........:x::..xx:.....x:x.x.....:..:.::.:..:..---:.x..x.:.:..----.x...:.x:.:.:..------------..:.:..:x.:..------x..x...::.::xx...:..x:..---.x.:.x.::.....:.::...::x.x..:.....:.........::x:......xx.....xxx....:.x............x..:....::.:.......x::.------..x....:.:..x..:x.:x...xx...:.x.. 12M2I48M2I12M2D63M9I12M5I5M1D20M1I10M12D11M19D165M3I12M4I15M12D13M6I24M3D106M6I33M 360/561 64.2% 599/94230402 0.0% 87/561 15.5% 123056291 67158264 +7250 chr4 + 190214555 186284115 186284114 186284270 156 AGGATCGTTGGAGGAACTGCGTCTGTTCGTGGTGAGTGGCCGTGGCAGGTGACCCTGCACACAACCTCACCCACTCAGAGACACCTGTGTGGAGGCTCCATCATTGGAAACCAGTGGATATTAACAGCCGCTCACTGTTTCTATGGGTCAGTACCA chr4 + 94230402 63224639 63224638 63224794 63224639 63224638 63224794 156 AGGATAATTGGAGGGACGGACTCTTCCCCTGGTGAATGGCCTTGGCAAGTGAGCTTACATGTGAAGCTATCTCGCCAGAGACACCTCTGTGGAGGCTCTATCATCAGTAACCAGTGGATCCTTACAGCTGCCCACTGTTTCATGAGGTGAGTCCTA .....x:.......:..x.xx...x::.x......:.....x.....:....x.:.:..::::.xx::.:.:xx:...........x...........:.....::.x...........x:.x.....:..:.........xxx:...x...x.:. 156M 110/156 70.5% 156/94230402 0.0% 0/156 0.0% 123059476 67155079 +7805 chr4 + 190214555 186285626 186285625 186285837 212 TTTGCTCCTTAGGGTAGAGTCACCTAAGATTTTGCGTGTCTACAGTGGCATTTTAAATCAATCTGAAATAAAAGAGGACACATCTTTCTTTGGGGTTCAAGAAATAATAATCCATGATCAGTATAAAATGGCAGAAAGCGGGTATGATATTGCCTTGTTGAAACTGGAAACCACAGTGAATTACACAGGTACGGAGAATTTTATCCGGAAAG chr4 + 94230402 63226605 63226604 63226813 63226605 63226604 63226813 209 TTTTTCCCTCAGTGTTCAGAACCCCAACATTTGGCGTGTTTATGCTGGTGTTTTAAAACAATCAGAAATAAATGAGAATACACCTTTCTTCAGAGTGGAAGAGATTATTATTCATCCTCAGTATAATTCTGCACAGACTGGATATGACATTGCTTTACTGAAGCTTGATAAGGCTATGAATTTTACTGGTATGT---ATTCTATCTCAGAAG ...x::...:..x..xx..xxx..:..x....x......:..::x...::.......x.....x........x...:.:...:.......::.:..xx....:..x..x..:...xx.........xx:x...x.:.x:..:.....:.....:..::....:..x..x.xx:.x:......x:..x....:.x---...:....:x::... 194M3D15M 142/209 67.9% 209/94230402 0.0% 3/209 1.4% 123059021 67155534 +5435 chr4 + 190214555 186286377 186286376 186286535 159 TTGCGTCTCATATTTAAACCACGATTTTTTA----AATTTAGATTCTCAACGACCCATATGCCTGCCTTCCAAAGGAGATAGAAATGTAATATACACTGATTGCTGGGTGACTGGATGGGGGTACAGAAAACTAAGAGGTAAAAATGA--------------TGTTGTTATATGTGC chr4 + 94230402 63227046 63227045 63227222 63227046 63227045 63227222 177 TTGTTTCTACTGGCCAAACTAATATTTTTAATCATGTTTTAGATCTTCAACTTCCTATTTGCCTGCCATCAAAAGAAGAGGCTAGCATTCTCTATACTGACTGCTGGGTAATTGGATGGGGTTACAGGAAGGAAAGAGGTACAGATAAATATTTAAACAGTGTGTTCTTGTATTTGC ...:x...xx.:x::....:.xx......x.----:x.......::.....xx..:..x........x..x....:...x:xx.:::.xx.x..:.....:........:.:.........x.....:..:xx........x.:..:.--------------....x..:...x... 31M4I113M14I15M 111/159 69.8% 177/94230402 0.0% 18/159 11.3% 123059331 67155224 +6509 chr4 + 190214555 186287690 186287689 186287861 172 TACAAAATACTCTCCAGAAAGCCAAGATACCCTTAGTGACCAACGAAGAGTGCCAGAAGAGATACAGAGGACATAAAATAACCCATAAGATGATCTGTGCCGGCTACAGGGAAGGAGGGAAGGACGCTTGCAAGGTAACAGAGTGTTCTTAGCCAATGGAATATATGCAAAT chr4 + 94230402 63229440 63229439 63229611 63229440 63229439 63229611 172 TAGAAGATATTCTTCAGAAAGTTACTGTTCCCCTAATGTCAAAAGAGGAATGCCAGGCAAGATACCGGAAGCGCAGAATAGATGACAAAGAGATCTGTGCTGGCTATGATGAAGGTGGAAAGGATGCCTGTAAGGTAACAAAAAGATGTCATATACTGTCATATATTTCAAT ..x..:...:...:.......::.xx:.x...:..:..x.x..x..:..:......:x:......x.::::.::.:....:x:x.:..::x.........:.....:::x.....x..:.....:..:..:.........:.:x.x.x.:.xx:.x..xx......x:x... 172M 111/172 64.5% 172/94230402 0.0% 0/172 0.0% 123058250 67156305 +3224 chr4 + 190214555 186287870 186287869 186287917 48 TTAATGCGTTGGGGTTTTTTTGTTTGTTTTGTTTTTTTTGTTTGTTTT chr4 + 94230402 65964913 65964912 65964960 65964913 65964912 65964960 48 TTAAGATGGTGGGGTTTTTTTGTTTGTTTTGTTTTTTTTTTTCGCTCT ....x::.x..............................x..:.:.:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 120322957 69891598 +8757 chr4 + 190214555 186288420 186288419 186288602 183 CTGTGCACCTTTTCTTGTCTCCCCTCGTTCTAGGGAGATTCGGGAGGCCCTCTGTCCTGCAAACACAATGAGGTCTGGCATCTGGTAGGCATCACGAGCTGGGGCGAAGGCTGTGCTCAAAGGGAGCGGCCAGGTGTTTACACCAACGTGGTCGAGTACGTGGACTGGATTCTGGAGAAAACT chr4 + 94230402 63231050 63231049 63231228 63231050 63231049 63231228 179 CTGTGAACTCTTTCTG----TCCTGTGATGCAGGGAGATTCTGGAGGACCACTGTCATGCAGGCACGAGGAAGTGTGGTATCTGGTGGGCATCACTAGTTGGGGTGAAGGCTGTGCTCGGCCCCAGCAGCCAGGAGTCTACACAAAAGTTGTTGAATTTTCAGACTGGATTTTGGAAAAAACT .....x..::.....x----:..:x:.x.x:..........x.....x..x.....x....::...:.x..:..x...:.......:........x..:.....:.............::xxxx...:......x..:.....x..x..x..:..:.x:x::.........:....:...... 16M4D163M 132/179 73.7% 179/94230402 0.0% 4/179 2.2% 123057370 67157185 +3465 chr4 + 190214555 186294874 186294873 186294934 61 GTGTGCCTGTAGTCGCAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:x..........::........x.xx.x...x.:...........:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 110261670 79952885 +3333 chr4 + 190214555 186299704 186299703 186299834 131 CTCCAGAAAGCTTGCTTGCTTTTTCTTTC---TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTT chr4 + 94230402 63697108 63697107 63697239 63697108 63697107 63697239 132 CTCCACAGACTTTATT--CCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT .....x.:.x:..::.--.:.:.:.....---.x.:..:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:.x.:..x:.. 16M2D11M3I102M 79/129 61.2% 132/94230402 0.0% 5/129 3.9% 122602596 67611959 +3406 chr4 + 190214555 186299707 186299706 186299842 136 CAGAAAGCTTGCTTGCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTT chr4 + 94230402 32895587 32895586 32895719 32895587 32895586 32895719 133 CATAAATCCAATCTGTCTCCTCTTTCTTCCTATTTTTTC---CTATCATTCTCTGTATTTTCTGCTGGTTCTGTCAGCGTCTCCTCACCTTTCTCTACCATTCTTTGTTTCTCTCTTTCAGTTCACATATTTCCTT ..x...x.:x:::..::.::........:..x..:....---..x..x....:.x.x.:..::x:.xx....x..xx:x.:..:.:x::.:.:...x:.x......x.....:.......x:.:x.x.x:..:... 39M3D94M 81/133 60.9% 133/94230402 0.0% 3/133 2.3% 153404120 36810435 +3099 chr4 + 190214555 186299714 186299713 186299822 109 CTTGCTTGCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697130 63697129 63697235 63697130 63697129 63697235 106 CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTC---TATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...x.:x.:x......:.:...:.::..x.....:---.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::..........:....:. 35M3D71M 66/106 62.3% 106/94230402 0.0% 3/106 2.8% 122602584 67611971 +3346 chr4 + 190214555 186299716 186299715 186299839 124 TGCTTGCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTT chr4 + 94230402 33934167 33934166 33934295 33934167 33934166 33934295 129 TGTCTGCTGTTTATCCTTCTATTTACTTGCTTTTTTTTCTCATGTAGTGTTATCTTTTTTTTTTCCCTTCTTTCTTTCGTGCATGTTCAGAGCTGTTTAATAACTTTTCTCCTTAATGTCTTTTTCCTT ..::....x...x.:::.:.x...x...x....:...::.:x.x.xx.x:.x.....:...:..:.:...........x.x.x.x:.-----:.x...xx.xx:..:.:..:..x..x.:.:....:.. 87M5I37M 78/124 62.9% 129/94230402 0.0% 5/124 4.0% 152365549 37849006 +3212 chr4 + 190214555 186299718 186299717 186299838 121 CTTGCTTTTTCTTTCTTTC--TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ...xx..::...:::..:.--.x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::........x..:..:..x:.. 19M2I102M 72/121 59.5% 123/94230402 0.0% 2/121 1.7% 122602601 67611954 +3264 chr4 + 190214555 186299719 186299718 186299839 121 TTGCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-ATCTTTCTTTCTTT chr4 + 94230402 63972021 63972020 63972142 63972021 63972020 63972142 122 TTACTTTTACCCTTTTCCTTCTCATTGTTTTCCTCTTCTTTATTTACCCTGTATTTAATTCTTCACATTCAGTTCTCAATGTTTCTCTTTCTCTCTTTTGTTCATTCAATTTTTGTCTCTTT ..:.....x.::.:..:...:..x..x...:::....::..x:..x.::.x.x.:.xx:.:.::x:x..:xx....:xx.x.:.:.......:.....:x...x...-..:...x.:..... 107M1I14M 74/121 61.2% 122/94230402 0.0% 1/121 0.8% 122327698 67886857 +3015 chr4 + 190214555 186299725 186299724 186299842 118 TTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTT chr4 + 94230402 63697122 63697121 63697239 63697122 63697121 63697239 118 TTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ..:..:..:..:::xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:x:.:....x:xx.:.:.:...::.:.::....x.::...:..:..x:.. 118M 66/118 55.9% 118/94230402 0.0% 0/118 0.0% 122602603 67611952 +3481 chr4 + 190214555 186299725 186299724 186299845 121 TTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCT chr4 + 94230402 63697118 63697117 63697239 63697118 63697117 63697239 122 TTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTC-CCCTCTTTTCTTTCTTCCTTTTTATTT ...x..:..:..:....:xx:x..:.:.....:....:.:x..::.:.x....xx....--....xxx:::..x....:.:x.xx.......:..-::..:.:x........:....:.x.:. 59M2I34M1D27M 77/120 64.2% 122/94230402 0.0% 3/120 2.5% 122602607 67611948 +3903 chr4 + 190214555 186299728 186299727 186299853 126 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTCCTATCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCT-TTTCTTTCTTCCTTTTTATTT ....x..:..:.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx....--.x....xxx:::..x....:.:x.xx.......:..x:..:.-..........:...::...:. 60M2D42M1D21M 81/123 65.9% 123/94230402 0.0% 3/123 2.4% 122602611 67611944 +3436 chr4 + 190214555 186299732 186299731 186299857 126 CTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTCCTATCTTTCT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTC-TCTCCCCTCTTTTCTTTCTTCCTTTTTATTT ....x..::::.:.....:xx:x..:.:.....:....:.:x..::.:.x....xx....--.x....xxx:::..x....:.:x.xx......-...::.:.::.............x.:.x.:. 60M2D32M1D31M 78/123 63.4% 123/94230402 0.0% 3/123 2.4% 122602615 67611940 +3088 chr4 + 190214555 186299737 186299736 186299818 82 TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 + 94230402 57372028 57372027 57372109 57372028 57372027 57372109 82 TTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ........::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x..... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 128927709 61286846 +3091 chr4 + 190214555 186299740 186299739 186299831 92 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTT chr4 + 94230402 57372027 57372026 57372118 57372027 57372026 57372118 92 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCTCATATTGTT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x.....x..xx:.x.....:x:..:x.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 128927713 61286842 +3557 chr4 + 190214555 186299749 186299748 186299870 122 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCT-TCCTATCTTTCTTTTCTTTCTTTTT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTC---CTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTA-CTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ....x..:..:..---.....:xx:x..:.:.....:....:.:x..::.:.x....xx.....x.:.:xxx.:..:.-....:.:x.xx.......-...:x.....::......:...... 13M3D62M1D18M1I25M 80/118 67.8% 119/94230402 0.0% 5/118 4.2% 122602632 67611923 +3303 chr4 + 190214555 186299751 186299750 186299874 124 TTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTCCTATCTTTCTT---------TTCTTTCTTTTTTGAT chr4 + 94230402 6297115 6297114 6297250 6297115 6297114 6297250 136 TTCTTCCTATATTCTGATTTTCTTTACTTCATACATTCTCTGTTCTTTGACCCGTCTTTCCACGTCTTTGTCTCTTTCTGTTGTCTTCCTGTCTTTTTCCATATGGTTCTTTGCACTAGCTTTTTTTTTTTTTTAT .....:..---....xx:.......x:...x.x.x....:.x..::..xx:::x.:.:.::x:x.....x.:......xx:.x....:..x.....:.:.x...xx.....---------..:...:......x.. 8M3I100M9I16M 82/124 66.1% 136/94230402 0.0% 12/124 9.7% 180002636 10211919 +3073 chr4 + 190214555 186299751 186299750 186299853 103 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTCCTATCT chr4 + 94230402 83326934 83326933 83327028 83326934 83326933 83327028 95 TTCCTTTATTCACCATCTTTATCTTTCTAGCCCCCTTTCTTTC----------TCTTTCATTCAACTCTGTTCTTACATTTTTCTGTCTTTTCTTTCTCCTTTCT ...:..:x...x::x.:.:.x.......xx.:::.........----------......x...--:.::x.....x...:.....x.....::..::....x... 43M10D10M2I40M 65/93 69.9% 95/94230402 0.0% 12/93 12.9% 102972817 87241738 +3009 chr4 + 190214555 186299756 186299755 186299827 72 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCAT chr4 + 94230402 57372027 57372026 57372098 57372027 57372026 57372098 72 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCAT .:.......::..x.::..x..:.:...::::::..xx:.x..x.:.........:...::...x....... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 128927729 61286826 +3548 chr4 + 190214555 186313059 186313058 186313119 61 GTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGGACCCAGAAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:.........:.::.......:x.xx.x...x......:......... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 110279855 79934700 +12257 chr4 + 190214555 186328467 186328466 186328875 409 ATTTTTATTTCTCCTAATTTGTTATTTATCAGGAGTGACTGAAATAAAAAATATAATTGAGCCCTGTCATCATTATCATGGAAATGGCTTTAAGAGAAAACTG----ATCAGATGAATACTATTGCCTCCCATTTTCAACCACGA--AACAGTTGCCACTGATAAATTGACAGTC-----AGGAGTCTGTCAAGAATGCTCAAGATATGTTATATAATACAACATGCCTGTTCACAGGGGGAAGCATCCTAGGAAATAACTTATGTGTACTTCT-GATTTCATCATACAAGACAAGCACAAACGCACCACCCATGCCTCTGAGAACATTGGACCATGCACCCTTGAAAAAAGCTCTGCCTCCTTCATCAGGAGCAATCTTCCTCCAGCAGTGAAGCCTGCCTGTGTACATGATGTCAGCTG chr4 + 94230402 16692578 16692577 16692966 16692578 16692577 16692966 389 ATTTTTATTTCTTCGTACTCTTTG---AACAGGAGTGACTGAAATAGAAACCACGTTTGAGTCCCAGCA--------GTGGGAATGATTT---GATAAAGATGGGGCAGGAGGTGGTCCCTGCCCCATGCCAACCTGTATAAATATCATCCGTTACTGTTAGTAACTAGACAGTTTTCATACAAGTC---CATGAATGGCCA---TAGATAACATATTACAACATGCCAGTTCAGAA------------CAAGAAATAATTTATGTGTACTTCTTAATTTCGTCATACAGCACTAAGACGAAAGCACCACCCATTCCTCGGAGCACATTCGACCATGCACCTTTGAAAAACGCCTTGGAGCCCTCATCCCGGGCAATCTTCCTCCAGCAGTCAATAGTGCCGCTGTACATTATGTCAGCTG ............:.xx.:.:x..:---.x.................:...x:.::x.....:..::x..--------:...:....::..---..x...:x..----.xx..:..:x:x..:::x.x.x...x::.xx.:x.xx.--.x.x...:.:::.::...x.x......:-----.x:....---..x.....x:..---..x:.x.:...x...........x.....x.:------------:.:.......:..............-:.....:.......:x..x.:x..:..x...........x....x...x.....x...........:........x..::..xxx..:.....xx.:...................x..xxx....xx.......x.......... 24M3D42M8D13M3D10M4I38M2I28M5I7M3D12M3D32M12D25M1I146M 272/377 72.1% 389/94230402 0.0% 44/377 11.7% 169635889 20578666 +8160 chr4 + 190214555 186328716 186328715 186328875 160 TTATGTGTACTTCT-GATTTCATCATACAAGACAAGCACAAACGCACCACCCATGCCTCTGAGAACATTGGACCATGCACCCTTGAAAAAAGCTCTGCCTCCTTCATCAGGAGCAATCTTCCTCCAGCAGTGAAGCCTGCCTGTGTACATGATGTCAGCTG chr4 + 94230402 40758309 40758308 40758469 40758309 40758308 40758469 161 TTAGACATACTTCTTGATTTCATCATAAAGTACTAGTACAAAAGCTCCACCCATGCCTCTCAACACATTTGACCAGGCACCTTTGAAGAATGCTTTGGATCCTTCATCTTTTGCTATCTTCTTCCAGCAATCAATTGTGCCCTTGTACATAATATCAGCTG ...x:::.......-............x.:x..x..:.....x..x..............x.:x.....x.....x.....:.....:..x...:..xx.........xxxx..x......:.......:.x..x:x....:x.......:..:....... 14M1I146M 123/160 76.9% 161/94230402 0.0% 1/160 0.6% 145570407 44644148 +13285 chr4 + 190214555 186328874 186328873 186329200 327 TGCACCCTGACTGCATCATCATTCCGTGGCGAACAGCGTCAAATGGATAGGAAGTCAACCCAGCAACGGCAGTGACGGACTGCGCGATCATACGGCTGATGAC-ATGTGAGTGTTCCTGGAATCTGGAAGCATTCT----------------------------------------------------------------------------------------------------------CCTTGCAGTGTCATAGACACCGAAGCAGGCAGCTCGGTAGATGATAATACCCTGCACAGACCTGTTAGAGCCTTGGTACAGGCCTTTAATCCCATCAGATTTGTAGATCTTAACCAGGCGGTCACCAAGGCCTTGGAATTCCCTTTCAGCTCCAGCTTTACCCACATCAGCTGCTAGATGGGTACGGTCAAA chr4 + 94230402 16693517 16693516 16693950 16693517 16693516 16693950 434 TACGGCCGGACTGCATCATCATGCGGCGCCGAACGGTATCGAAGGGATAGGAGGTCAGACCTGCGACCGCGGTGACCGTCTGAGCAATCATCCAGCTGACCACGATGTGGGTGTTCTTTGGGTCAGGGAGCATTCCTGCGGGAGAGAGGTTCTGCGTGAGAGCGGCGGGCGAGCCGCCGGCACGCTCAGCGCACGGCTGCGGGCCGGCACCTCCGCGGGAGCGCCGTGCCGCCCCACCTACCCTTCGCGGTGTCGTAGATGCCGAAGTAGGCGGCTCTGTAGATGATGATGCCCTGGACGGACACGTTGAAGCCCTGGTACAGCCCCCTGAGGCCATCCGAGCGGAAGATTTTCACCAGGCAGTCACCGAGGCCGCTGAACTCGCGGTCGGCCCCGGCTTTGCCCACGTCGGCTGCCAGGCGGGTTCGGGCGAA .:.:x..x..............x.x.:.x.....:.::..:..x........:....:x..x..:..x..:.....x.x...x..:.....x.:.....:x..-.....:......:.x.::..x..:.......:----------------------------------------------------------------------------------------------------------.:.:..:.....:....::......:....:....x.........:..:.....x..:...x:...::....:........x..::.:.xx.....x..x:x.x....:..x.......:......:.....x:x...:..x.xx..:..:..:.....:.....:..:.....:..::....x...x.:.. 103M1I32M106I192M 239/327 73.1% 434/94230402 0.0% 107/327 32.7% 169635357 20579198 +25201 chr4 + 190214555 186329007 186329006 186329502 496 CTCCTTGCAGTGTCATAGACACCGAAGCAGGCAGCTCGGTAGATGATAATACCCTGCACAGACCTGTTAGAGCCTTGGTACAGGCCTTTAATCCCATCAGATTTGTAGATCTTAACCAGGCGGTCACCAAGGCCTTGGAATTCCCTTTCAGCTCCAGCTTTACCCACATCAGCTGCTAGATGGGTACGGTCAAAATCAAGAGGGTATACAAAACATAAGGATGTGGCCCCAGGGGCACCACCTGATGCCAGACTCCCTGCAAACTTGTGCCAAAACTGGATCCTCTTGT-CACACCCCCCGGGAAGATCTGCTTGTTTTTATCTTTGAAGGCAAAGTTGAGAGCGTGGGTAGGGAAGTATCTGATGACATTGGCCAGGTTACCGTGCCAGAGGGACAGGACTCC-TGCTCCTTGGGAATGCGGACCATGCAGTCTACAACGCCCGTGTATTGCTTATCTGCGGTGATCTGCTTGCTGGCACTCTGCACCTGCAGCAGC chr4 + 94230402 40759501 40759500 40759998 40759501 40759500 40759998 498 CCCTTGGCTGTGTCATAAACCCCAAAATAGGCTGCTCTGTAGATGATGATGCCCTGGACAGACACGTTGAATCCCTGGTACAGGCCCCGCAGGCCATCGGACTTGAAGATCTTGACAATGCAGTCACCCAGCCCCGTGAACTCCCTCTCGGATACTCCTTTGCCCACGTCAGCCGCCAGCCGGGTCCTGGCAAAATCCAGCGGGTAGACGAAGCAGAGCGAGGTGGCTCCAGCCGCGCCACCGGACGCCAGGTTGCCCGCGAAGTAGCGCCAGAACTGCTTGTGCCTGTCCACTCCCCCCAGGAAGATCTGCTTGTACTTGTCCTTGAAGGCGAAGTTGAGGGCCTGGGTGGGGAAGTACCGGATGACGTTGGCTAGATTGCCCCTCCAGAAGGAGATGATGCCTTGCTCCTTGGGGATGCGGACGACGCAGTCGATGATGCCCTTGTACTGTTTCTCCGCTGTGATCTGTTTGCTGGCGTGCTGGACCTGGAGAAGC .:.:.x..x........:..x..:..::....x....x.........:..:.....x......x:...::.x..:...........::xx.xx.....:..:...x.......:..x.x..:......x..x..:xx...:.....:..:.x.x.xx....:.....:.....:..:..x:....x.x.x.......x..x.....x..:..:..x.:x..x.....:....xx..:.....x..:.....::.x..:..:..x.x.:....:.....xx.x:x.:...-...x......:...............x:..:..:........:........:..x.....:........:.x......:.....:..:..:..x:x.....:...x.x..:x..-...........:........x.:......x.::.:....x....:..:..x..:..x........:........::x...x.....x..x... 289M1I114M1I93M 368/496 74.2% 498/94230402 0.0% 2/496 0.4% 145569506 44645049 +14278 chr4 + 190214555 186329304 186329303 186329679 376 CCGGGAAGATCTGCTTGTTTTTATCTTTGAAGGCAAAGTTGAGAGCGTGGGTAGGGAAGTATCTGATGACATTGGCCAGGTTACCGTGCCAGAGGGACAGGAC-TCCTGCTCCTTGGGAATGCGGACCATGCAGTCTACAACGCCCGTGTATTGCTTATCTGCGGTGATCTGCTTGCTGGCACTCTG-----------------------------------------------------------------------------------------------------------------------CACCTGCAGCAGCAGCTTGACCC-CTCCGTGGGTGCCACCGCCATCTTGGAGATGGCCGCGGTCACTCCACCTGCCAGGAAGTCCTTG-GCAAGGACACAGCGGCATCTGTCATGTTGAAAGGAAGAGGAGGCAGGCGGCTGCGGGATGGGACTGGGCGGGAACC----GGCTTTGACTCTGGGGCTGCAGGGCGG chr4 + 94230402 16694415 16694414 16694907 16694415 16694414 16694907 493 CCAGGAAGATCTGCTTGTACTTGTCCTTGAAGGCGAAGTCCATTACTTGGGTGGGGAAGTACCGGATCACGTTGGCCAGGCTTTCGCGCCAGAAGGAGAGGACGCCCTGCTCGCGCGGGATGCGCACCACGCAGTCGATGATGCCCTTGTACTGCTTGTCGGCGGCGATCTGCTTGCTGGCGTGCTGCACCTGCGAggcccgcggcgccgtcagcgccgctccgcgcggccgcccgcccccccgccgccgccgccccccTCTCCTTGCGGCGACCTTGGAACGCCCGCCGCCCCCGTCCCGCCGCTCACCTGCAGCAGCAGCTTCACCCGCTCGATGGGGGCGACGGCGGTCTTGGAGATGGCGGCCGCCACCCCCCCTGTGAGGAAATCCTTGAGAAAGGACACGGCCGCGTCGGCCATGGCG---------GGAGGCGGGAGGCGACGAGGCGAGGCCGGGCGGAAGCCGAAGGGAGGCGGCGCTGCGGCAGCGAGGCGG ..:...............x:..:..:........:....:x.xx:.x.....:........:.x...x..:.........:.x:..:......:...x.....-:.......x:xx..:.....x....:......x.::.:....x....:.....:..x....:...............::x...-----------------------------------------------------------------------------------------------------------------------..................x....-...x:....x..x..x..x:.............x..x.:...:..x....:x.....:......-.x........:..x..:..x.:....x:.---------......:..x...x:..:.::.:.:.:......:.:..----..xxx:.:.x...x...x..::..... 103M1I83M119I23M1I64M1I29M9D38M4I27M 278/367 75.7% 493/94230402 0.0% 135/367 36.8% 169634889 20579666 +3039 chr4 + 190214555 186343525 186343524 186343557 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT chr4 + 94230402 72938557 72938556 72938589 72938557 72938556 72938589 33 TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 113404968 76809587 +3323 chr4 + 190214555 186351456 186351455 186351538 83 CATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTAAATCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::..:.--....:.:...........::........x.xx.x...x.:...:..:..:.:..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 110318259 79896296 +3420 chr4 + 190214555 186375679 186375678 186375751 73 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACCTGAGCCAGGGAGGTTGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........::::........x:xx.x.:.x...:...:..x:.:..x..x:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 110342474 79872081 +3161 chr4 + 190214555 186392767 186392766 186392831 65 AGAGGCTTATCAAGGCAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTCTATCTATG chr4 + 94230402 81099179 81099178 81099248 81099179 81099178 81099248 70 AAAAGTTTGTTTTGACAAAAGAACAGATAGAGGGAAAAAAAAAAAAAAAAAAGAAAGTTGTCCATTTATG .:.:.:..:.:xx.:.....:..-----.:.:::..................:...:.....:..:.... 23M5I42M 48/65 73.8% 70/94230402 0.0% 5/65 7.7% 105293588 84920967 +3061 chr4 + 190214555 186421758 186421757 186421812 55 TATTCATCCTATAAAAATCTCTGCCAATTATTCTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 73093378 73093377 73093432 73093378 73093377 73093432 55 TATTTATCCTATTAAAAATTCTGTACATTCTCTTTTTTTTTTTTTTTTTTTGCTT ....:.......x....x:....:xx...x.::..................x:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 113328380 76886175 +3001 chr4 + 190214555 186425816 186425815 186425866 51 TAGCATCTGTTTATTGCTTTTTTCTCTCTTTTTTTTTTTTTTTTTTTTGAG chr4 + 94230402 27688994 27688993 27689044 27688994 27688993 27689044 51 TAGCATATCATGATCATTTTCTTCTCTCTCTTTTTTTTTTTTTTTTTCAAG ......x.xx.x..:::...:........:.................::.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 158736822 31477733 +3188 chr4 + 190214555 186429299 186429298 186429380 82 AAATAAAATAAATAAATAAACACACATAAGAAGAGATGGAGAAAATTATCTCAAATTTCCAAAA-AAAAAAAAAAAAAATCTC chr4 + 94230402 89680063 89680062 89680145 89680063 89680062 89680145 83 AAATGGAAAAAAAAAGTAAATGCAAGTAGGAAGGAAAAGATAAGATGAACACACTCCCCCAAAAGGAAAAAAAAAAAAATCTC ....::..x...x..:....::..x:..:....::.x:..x..:..x.x.x..xx:::......-:................. 64M1I18M 57/82 69.5% 83/94230402 0.0% 1/82 1.2% 96749236 93465319 +3329 chr4 + 190214555 186430745 186430744 186430794 50 TTCTTCTTTTTCTTTTCTTTT-TTTTTTTTTTTTTTAGAAGGAATTTCACT chr4 + 94230402 90152632 90152631 90152682 90152632 90152631 90152682 51 TTCTTCCTTTTCTCCTTTCCTATTTTTTTTTTTTTTAGAAGAAATTTCACT ......:......::.:.::.-...................:......... 21M1I29M 43/50 86.0% 51/94230402 0.0% 1/50 2.0% 96278113 93936442 +3178 chr4 + 190214555 186449449 186449448 186449527 79 AGTGGCATGCCCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCA chr4 + 94230402 76033200 76033199 76033276 76033200 76033199 76033276 77 AGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA .....--...x.x....:.:.........x.::........x.xx.x...x..........::.:..x:xx:..:..:. 5M2D72M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 110416249 79798306 +3146 chr4 + 190214555 186455629 186455628 186455711 83 CGTGGTGGTGGGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGCAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x::.--....:.............::........x.xx.x...x::........::.x..x:xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 110422432 79792123 +3312 chr4 + 190214555 186457886 186457885 186457968 83 CGTGGCAGCGCACGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCACGAGAATGGCTTGAACCTGGGAGGCAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::.::.:.....--....:.:.........:..:........x.x:.x...xx:........::.:..x:xx:..:..... 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 110424689 79789866 +3468 chr4 + 190214555 186459147 186459146 186459210 64 TTTTCCTCTCTCCTTTTCTTCTCTTCTCTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 + 94230402 29058911 29058910 29058974 29058911 29058910 29058974 64 TTTTCCAGTCTACTTTTATTTTTTTCTCTTCTGTCCTCTTCCTTCTCCCTCCCTCTCCTTCTTT ......xx...x.....x..:.:.........x..:.::..::....:...:.....::...:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 157400236 32814319 +3204 chr4 + 190214555 186475192 186475191 186475300 109 GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAGAGAGAAAAGAAAGGAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAAGAAAGAGAGAGAGAAA chr4 + 94230402 11181405 11181404 11181513 11181405 11181404 11181513 109 GGATGGATGGAGAAGCGCTGAAGGGGATGGAGAGAGGGACGCACGGACAGAGGTGGGAAATGCAGAAAAAGAAAAGAAAAGATAGAAAGAAAAAATAAAGTTGGTGAAA .:.x.:.x.:..:.:x.xx.:.:..:.x.:..::...:.x.x.x:..x....:x::....x.x.....:.:.:...:..:..x:...:.....:.x.:..xx:.x.... 109M 65/109 59.6% 109/94230402 0.0% 0/109 0.0% 175293787 14920768 +3258 chr4 + 190214555 186483191 186483190 186483273 83 CGTGGTGGTGGGTGCTTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGGATTGCTTGAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......--::.x......:...........::.:......x.xx.x.:.x::.........:.:..x:xx:.....:.. 10M2D71M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 110449994 79764561 +4093 chr4 + 190214555 186509332 186509331 186509503 172 GAAGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAAAGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGGAGGGAGAAAGGAAGGAGGAGAAAGGAAGGAGGGAGGGAGGGAAGGAAGGAGAGAGGAGGGAA-AGAAGGAGA-GAGGGAAGGAGAGAGGGAGGGAAGGAAGGAAAG chr4 + 94230402 82677997 82677996 82678168 82677997 82677996 82678168 172 GGAAGAGGAGGAAAGGCAGCGTCAGTCGGGGGCAGCCGGGAGAGGAGACGGGGAGCGGTGGAGGAGAGAGGATGAACCGCAGCAGTGGGGAGGAGTGCGAGGAGAAACGAAGG--GGACAGAGAAGGGAGCGGACGGACACGAGGGGACTACAGAGAGCCGGGAGAAAGGAGAG .:.::....:.::...x..x.xx::xx.::..x.:xx:..:::....:x:.....x.:x.......:....:x...xx.x..x..x:.::....:x.x.:.::.:.:x.....--...x....:.....:-:..x...x.-.....:.xx.x....:.xx..:..:.....:.. 113M2D15M1I9M1I33M 104/170 61.2% 172/94230402 0.0% 4/170 2.4% 103831335 86383220 +49576 chr4 + 190214555 186533686 186533685 186534597 912 TTTTTAAACGGAGTCCACCTTTACTACATTATTGTTGGTCATCAGTGGAGACGGTTTCCATTTAACCCTATCGGCCACGTCGTTAGAGCTGTCCACAAAGAACACCCTGGCTGTACAGAGCGAGACTATAATTCTCCTGTATTCCTTCCTGAAATTTTGGTTCAGTAGCCCGTATATAATGGCATTGAGGCAGCTGTTGAAATACGCCATGTAGTAACTGGCCACAAACAGCCACTCTGGGATCCTAGGCACCATGCTGGCGGGGTCAGAGGCCACGGCCAGGCCAATGAAGTTCAGAGGAGCCCAGCAAATGGCAAAAAGGACAAAAACCACAAACATGGTGACAAAATTCCTGAAGTCCTGTGGTTTCAGTTTGGGTTTGCGGTCAGGTTTCACCCTCTGTCTGACCTGGAGAACCAGGATCCATATTCTCAGGTAACAGAAGATGACTATGATCATGGGGACGAGGAAGTGGAAAACCACCACGGCGATGGTGTAGGCGGAGCTGACGGACTGGGCGAAGGTGCACGAGTAGATCCTCGGGTCGTACTGGAGAGTCCCTGCACGGAGGTTGGGCAGGACGGCCGCCAGCGTCAGGAGCCATATGAGGAGCACGTAGCAGAGGGAGTTCTTGCTGCTGTACAGTTTGTCGTACTTGAGACTGTGGCAGATGTAGCAGTAGCGGTTGATGGCGATGCCGGTGATGTTGAATATGGAGCCGATGACGCTCAGGCCCATCAGGAACCCACTGACTTGGCAGTGCAGATAGCCCAGGTTCCACCCGTTGTTAAATATCGACATCAGCACCAACGGGTACGGATAAATGGCCACCACCAGGTCTGCCACCGCTAAGCTCACCACAAAGATGTTTCCTGAAAGAGAATCGTTTAGAAAATACAGTGAATACCAGTT chr4 + 94230402 63442642 63442641 63443547 63442642 63442641 63443547 906 TTTTCACACAGAGTCCACCTTCACTTGATTGTTGTTTGTAATCAGTGGAGAAGGTTTACTTCTTATCCTGTCTGCTGCATCATTAGAACTGTCCTGGAAAAAAGCTTTTGCTGTACAAAAACTGACAACAATTTTCTTGTATTCTCTTCTGAAGTTCTGATTCAGGAGTCCATATATAATGGCATTAAGGCAGCTGTTGAAATATGCCATGTAATAGCTAGACACGAACAACCACTCTGGAATTCTAGGGATTATAGTTTCTGGGTCAACAGCCACAGCAAGGCCAATGAAGTTCAATGGAGCCCAACAGACTGCAAACAGTACAAATACCACAAACATGGTTACAAAGTTTCTGAAGTCATGTGGTTTCAATCGGGGGTTGTTGTCTGGTTTAACTCTTCGTCTTACCTGAATAACAAGGATCCATATTCTCAAGTAACAATAAGTAACTATGGCTATGGGAAGTATGAAGTGGAAAAACACCACTGCTATTGTATATGCGGAACTCACAGACTGTGCAAATGTGCACGAATAAATCCTGGGGTCATACTGTAGAGATCCCACAAACAGGTTGGGCACAATAGCAACAACTGTTAGGACCCAGATAAGACCAACATAACACAAAGAATTCTTGTCACTGTACAGCTTGTCATATTTGAGACTGTGGCAGATATAGCAGTATCGATTGATAGCAATGCCAGTAATATTGAAAATTGATCCAATGACACTTAGGCCCATCAAGAATCCACTAATCTGGCAGTGAAGATATCCCAGATTCCATCCATTGTGAAATACAGATGTCAGGACCAGTGGATATGGATAGATTGCTACGACCAAGTCTGCAATTGCCAGGCTTACCACAAATATATTTCCTGTAAAATAAATAT---AAAAATA---TGAGTATTAGTT ....:.x..:...........:...xx...:.....x..x...........x.....x.x.:.x.:...:..x..::.:..:.....:......xx:..:..x:.::.x........:.:xxx...x.:....:..:.......::.:.....:..:..:.....x..:..:..............:.................:........:..:..:.x...:....:.........:..:.....x.::..:x.xx.x......:x:.....:..x................:x........:..:.:x.....x..x.....x..............x.....:..:........x..........:.:x...x...:x...x.....x..:..::....x.....:.x...x................:......:x.::.:......:::.....:.xx.x...........x......x..x..x..:..x.....:..x..:.....x..:..x........:..:.....x.....:.....x....x:..::..x:x..........x:.::..x:.x.x:..:....x...x..:..:xxx..:..:..x.::..:......:::........:.....:..:.................:........x..:.....:..:.....:..:..:.....x..x..x..:.....:..:..........:...:.....:.::........x.....x.....:.....:..:....x.....:x..::....x....::..:..:.....:..x..:..x....:......x.::..:.:...:........x..:.......x..:.x..x::.---:......---...:..::.... 887M3D7M3D12M 683/906 75.4% 906/94230402 0.0% 6/906 0.7% 123091044 67123511 +35027 chr4 + 190214555 186533714 186533713 186534568 855 TTATTGTTGGTCATCAGTGGAGACGGTTTCCATTTAACCCTATCGGCCACGTCGTTAGAGCTGTCCACAAAGAACACCCTGGCTGTACAGAGCGAGACTATAATTCTCCTGTATTCCTTCCTGAAATTTTGGTTCAGTAGCCCGTATATAATGGCATTGAGGCAGCTGTTGAAATACGCCATGTAGTAACTGGCCACAAACAGCCACTCTGGGATCCTAGGCACCATGCTGGCGGGGTCAGAGGCCACGGCCAGGCCAATGAAGTTCAGAGGAGCCCAGCAAATGGCAAAAAGGACAAAAACCACAAACATGGTGACAAAATTCCTGAAGTCCTGTGGTTTCAGTTTGGGTTTGCGGTCAGGTTTCACCCTCTGTCTGACCTGGAGAACCAGGATCCATATTCTCAGGTAACAGAAGATGACTATGATCATGGGGACGAGGAAGTGGAAAACCACCACGGCGATGGTGTAGGCGGAGCTGACGGACTGGGCGAAGGTGCACGAGTAGATCCTCGGGTCGTACTGGAGAGTCCCTGCACGGAGGTTGGGCAGGACGGCCGCCAGCGTCAGGAGCCATATGAGGAGCACGTAGCAGAGGGAGTTCTTGCTGCTGTACAGTTTGTCGTACTTGAGACTGTGGCAGATGTAGCAGTAGCGGTTGATGGCGATGCCGGTGATGTTGAATATGGAGCCGATGACGCTCAGGCCCATCAGGAACCCACTGACTTGGCAGTGCAGATAGCCCAGGTTCCACCCGTTGTTAAATATCGACATCAGCACCAACGGGTACGGATAAATGGCCACCACCAGGTCTGCCACCGCTAAGCTCACCACAAAGATGTTTCCT--GAAAGAGAA chr4 + 94230402 17749922 17749921 17750778 17749922 17749921 17750778 857 TTGTTGTTTGTTACAGCTGGGGATGGCTTGCTTTTCAGCCCTTCTGTCCCACCCTTGGACACATCGATGAAGAGCAGCCTGGGAGTCCGAAGCATGAGCAGTATCCTTTTGTACTCCTTTCGGAAATTCTGGTTAAGCAGCCCATAGATCACAGCATTGAGGCAGCTGTTAAAATAGGCCATAAAATAGCTTAGGACAAAAAGCCACTCTGGAATGTGTGGCTGCACTTTGGAAGGATTAATTGAAACAGCAAGGCCGATAAAGTTTAATGGTCCCCAGCACACAGCAAAAAGGACAAAAACCACAAACATAGTCAAGAAATTCCGTATGTCAGCAGCTCTGATCTTCTGCTTGCAGTCTTGTCTCACCCGGTGTTTGACTTGAATCACCAAAATCCAGATCCGAAGGTAGCAAAAAGTCACGATGGACAGTGGGACAATGAAGTGGACAACCACCACTGTGATCGTGTACGATGTACTCACCGTCTGGGCAAAGGTGCAAGAGTAAATCCGGGGGTCATACTGCAAGGAGCCAACAAAGAAGTTTGGCACAATGGCCACCACCGTGAGCGTCCACGTCAGACAGATATAGCAGCAGGTGTTCTTCAGGTTGAAGAGCTTATCATACCGAAGGCTGTGGCAGATGTAGCAGTAGCGATTGATTGCAATTGCAGTGATGTTGAAAATTGACCCAATGACGCTTAAGCCCATCAGGAACCCACTTATCTGGCAGTGAATGTTTCCCATAGTCCATCCATTATGGAAAATGGCACTCAAGATTAGAGGATACGGATACACCGCGACTACCAAGTCTGCGACAGACAAGCTGACGACAAAGATGTTGCCTACGAAAAAGGA ..:.....x..:.:x:x...:..:..:..x.x...x.x..:x..x.:.x.::.x..:..xx::..x.::....:..x.....xx..x.::...:x..x:.xx..:..::....:.....:.x......:.....x..:.....:..x..x.::.................:.....x.....:x.:..:..x:xx.....x...........:..x:xx...xx..:x:...x:..:.:.:xx.xx..:..x.....:..:.....:.:x..xx.......x.::..........................:..x.x:.......xx.x...xxxx.x.:.x.x:..xx.:....:...xx..:......xx...:....:..:.xx....::.....x..:.xx.....:..:..::.x..x...:x..xx.....:.x........x.........x.:...x.....x.xx.x:..x..x.x......:........x.....:....xx.....:.....x.::.xx..x:..x:..:...x....x:.:....:...x...x..x:x...::.x..:x:x.::......x:..x......xxx.:..x.x..:..:..:...:x:..:.......................:.....x..:..xx.:...........x..x..x..:........:.:..................x.::........x.x:.xx....x:x....:..:..:.x:..x..x.xxx...:x.::.:x..:........x.:x..x..:....:......x..x.x:.....x..x...........x...--....:..:. 846M2I9M 590/855 69.0% 857/94230402 0.0% 2/855 0.2% 168783792 21430763 +3814 chr4 + 190214555 186539086 186539085 186539159 74 GCGCACCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGAAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:....x......:.........x.::........x.xx.x...x.:..............x:xx:..:..:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 110505882 79708673 +3036 chr4 + 190214555 186539180 186539179 186539237 58 GCACTCCAGCCTGGCAACAGAGCAAGACTCCATTAAAAAAAAAAAAAAAAAAAAAGGC chr4 + 94230402 33327133 33327132 33327190 33327133 33327132 33327190 58 GCACTCCTGATCTTCAACAGACTAAAACTGTGCTGGAAAAAAAAAAAAAAAAAAAGGC .......x.x::xx.......x:..:...x:::.::...................... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 153212047 37002508 +9307 chr4 + 190214555 186555171 186555170 186555550 380 GCGGGCCCTACCTGCGTTCCTGAGCTTCTTGTTCCGATACACCGACAGGATGACCAGGAGGTTGCCCAGGATGTCCACCACGATGGTGAAGATGAGGACGCAGGCCAGGGCGGACGCCAGCCACGA-GGGCCGCGCGCCGTCCCCGCGGAGCACGGGC----TGGGA----GGCGTTGGGCAGCGCGCTGCCGTTGCCCTGCAT----------GGTCCCTGTGCG---------CGTCCCGGC-----------------CGCGGGGCCATCGCCCGCCTCGTCCGCCCGCCCGACCACTTGTTAAGGCTCCGCCCGGCGCTCCCCGCGCCCACGCCCCATCCCGCGCGCTCCTC----------CACGCCGCGCCCCCGGACG-------------CCCACGCCGCGCCGGACGCCA------CGGCCAGGTGACACCTGGTGTCCGCCGCG chr4 + 94230402 63492045 63492044 63492495 63492045 63492044 63492495 451 GCGACCCTTACCCGCGTTCCGCAGTTTCTTGTTGCGGTACACCGAGAGGATGACCAGGAGGTTGCCCAGCAGGTCCACCACGATGGTGAAGATGAGGATGGTGGCTAGCGTGGAGGTGACCCAgggcgggcggcgcggggagccctcggccggcgggtcccgcgggAGAACGGTGCCGTTCAGCTCGCTGCCGTTCGCTCGCATCCCGCCGCCGCTTCCCCAGGCGGGAGAGAGCCGGCCGGGCTCCCTCCTTTCTGTCGGTGCCGGGACGGCGGCCGCCACCCTCCGCCGCAGGGCTGCCCGACCTAGGACAACACGGAGCTGACCATGC---CGCTCCGCCTAGGAAGTTTCCCCCGAAGTGTGCACGCAGAGCGGCGGGACACTTTTATAGTCTCCCCCCGCCCCGCCCGCCGCAACCGCTGCCGCCAGGTGACACCGAGCCGCCCCCGCG ...:x..:....:.......xx..:........x..:........x.......................x.x..........................:.xx...:..x.:...x.:x.x...x.:-....x.....xx.xx...x...xxx:....:----:....----..:.::.xx....x..........xx.::....----------xx....::x...---------..x..x...-----------------:..x...x.:x..x.....x.x::.xx....xx.:.::.::.x:xx:.xx.x:.x...x...xx..::..---...:..::.:x.x:x.:.:.:.----------.....x.x..xx.x....:-------------...x....x....x.x...x.------.x.............x:.:xx..x..... 126M1I31M4I5M4I33M10I12M9I9M17I70M3D22M10I19M13I21M6I29M 261/377 69.2% 451/94230402 0.0% 77/377 20.4% 123063126 67151429 +4103 chr4 + 190214555 186566834 186566833 186566932 99 TGCGTGTGTGTCTGTGCGTGTGTGTCTGTGTGTGTG----TGTCTGTGCA----------TGTGTGCATTTGCATGTGTGTCTGTGCGTGTGTGTGAGTTTGCAGAGGTATGC chr4 + 94230402 5214205 5214204 5214317 5214205 5214204 5214317 113 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGC ...:x.....:.::..x.:::.::..:.......:.----......::..----------...:.................x:.::x::.......x.:x......x..:... 36M4I10M10I53M 71/99 71.7% 113/94230402 0.0% 14/99 14.1% 181352629 8861926 +3598 chr4 + 190214555 186573492 186573491 186573574 83 AGTGGTGGTGGGTGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----::.x....:.............::........x.xx.x...x::...........:..x.xx:..:..:.. 7M5D71M 58/78 74.4% 78/94230402 0.0% 5/78 6.4% 110540292 79674263 +3182 chr4 + 190214555 186573633 186573632 186573683 51 AAAAACAAAACAAAACAAAAAAACAAAAAAACAAAAAACAAACAAAAAACA chr4 + 94230402 75042773 75042772 75042823 75042773 75042772 75042823 51 AAAAACAAAACAAAGCAAAAACACAAATGAACAAAAAATACCCAAAGACCA ..............:......x.....x:.........:.xx....:.x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 111530860 78683695 +3213 chr4 + 190214555 186573640 186573639 186573681 42 AAACAAAACAAAAAAACAAAAAAACAAAAAACAAACAAAAAA chr4 + 94230402 54341929 54341928 54341970 54341929 54341928 54341970 42 AAACAAAACAGAACAACAAAAAAACAAAAAGCAAACAAATAA ..........:..x................:........x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 132231711 57982844 +3156 chr4 + 190214555 186584290 186584289 186584345 56 ATGTCAAAAAAAAAAA-AAAAAAAAAAAAGTGGGGACAGCCAGCAAGAAACAGGGAA chr4 + 94230402 78003616 78003615 78003672 78003616 78003615 78003672 57 ATGCTAAAAAGAAAAATAAAAAAAAAAAAATGAGGTTTGCAAGTAAAAAACAGGGAA ...::.....:.....-............:..:..x:x..x..:..:.......... 16M1I40M 45/56 80.4% 57/94230402 0.0% 1/56 1.8% 108580674 81633881 +67758 chr4 + 190214555 186587784 186587783 186589247 1464 AAAGCTCAAGTATTTTATTAATAATTTATTGTCAGTAAGAAAGACTGGCTAATGGTAGTTTTCATTAAAAACCTTTACAAGACCATTGCATCACAAATATACAGACACTATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATG-AAAAATGTTTATAATTCTAAA-TACAGCAACCCATGTAAGACATGTTCATGTATCTGATC----------TCTCCTTCATCCTATGTACAGCTAGAAATGAATGACTACACTGAAATGTAC-TAACAAAATGTCACACTTCAGT------GGAAAAAGACAGAATGAAACCCTGGTTATAGTAAAAAAAAAAAAATCAGGGTGCTAGAT--AATGGCACT--GACACCACCAAAATTCAGTTGAAA-CAAATGCACAAAATATCTTGGAAATCTAGTTAAAACTATGAAAAATCAAATCTGTACATAAAATTTACAAAAAAAAGAGACAGGAAAATTAAAATAATCAAATCTATATAAATACATGAATCATGCTGACAACACAGGACTGATTTTTCGTTTGATTATTTTAACACAGACAGATGTAAATCCCAAAAG-ACGTTGGGAAATGGCACAGCCGATGAAAACCTCA--------CGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGG-------CGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAAGCTTGGAAGCACT-------GCTG--------------------CAAAGAACAGCGCGGATTACTCACATCACCTCTAG------GTTCACTAAAG---TCAGGCACTTTGGGGGGAGTTGAGAGTCAGACTTCCGTGTGCTGCTGGGAATCCAGGGGCGGGATCGTCACCTCTTCGAAGTGGCCGTCGTCCCCGCTCTCATAGTCACTCATCATGACCTCGGACTCCACTTCGCAGCAGGCTGACACGTCAGAGCAGGAGGCGGTGGAGGCGTACACAGACATGGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTCTTTGATACCCTGGCGGGTAAGGGGCATGGGGTTCTCTACAAGTACTATTCTCACCAGTGCCTTTTGTTTGAGGTTCAGACATATCGAGGGGATAAAAATTGGGCAAATACTGATTCAAGTTGAACCTCTGCCGGTTTCTTGATGAAGAACCCAAGCTACCCGCGGCAGGCATGTCTCTAGGAGGGTGGATGGATTCAAACTGATTGCTGAATTCGGGCGGTAACGGTGGTAGCTCATCAGCTGCGGGGAAGTCTTCTGGGGGTGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTGGGGAACTCTTGTATGTCCGGCAGAGGAACGCTTGGCATCCAATCTGATGTATCCCAGTGATACCCTT---GGTGGA----AAAGAAAACAGATGTCAG chr4 + 94230402 63522247 63522246 63523759 63522247 63522246 63523759 1513 AAAGCTAAAGTATTTTATTAATAATTTATTGTCAGTAAGAAAGACTGGCTAATGGTAATCTTCAGTAAAAACCTTTACAAGACCATTGGATCACAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTTTAAACTGGTATGTAGAGGGTCTTCAACACACTTTCCAAGAAGGGAAAAATGTTTACAGTTCTAAAATACAGCAACCCATTTAAGACATTTCCATTTAGCTGACCCAGAAAAATATCAGACCTAACCTATGTACAATTGGAATTGTGTGAATATGTTGAAATTCTCATAATGAAATGTCAAACCTTGGTTGTGGGAGGAATACATACAGTGATTCCCTGATTATAATAAC----------TCAGGGTGCTAGTTTTAATGGCACACAAACACCACTATT-TTCAGTGGAAAACAAATTCACAAAATATCTACAAAATCTAGTTAAAACTATTAAAA-TCAAAACTGTACATAAAATTTACAAAAAGTAGG---AGGAAATTAATTTTCATTAGAACTATATAAATATATGCATCATGCTAATA-TGGAGAAGTGGTATGTGATTT----CTTTTAACATAGACA-ATGCAAGTACAAAAAACACGTTCAAAAATGGCACAGTCAGTGGAATTCTTGGAACTGTCCAATTATAGTAGGTCAGGAAATGGAAATA---AGCTGGTTTAGTGAAATGAACTGCATGATCCAATGCCACCATGCCAGTTTAGCTCACTGAAACA------GAAGCATTCACTGAGGCTGGGGGAAGAGAGAGAGAGGGGAAAGAAAAAGAAAAAGCTTTTGAAAATTTTTCTAGAATTAAGTCTGTTAAAGAGTCCAGGCACTTTGTTGAGTGT-GAGTGTCAGACTTCTGTATGTTGCTGGGAATCGAGTGGAGGAATTTTCACATTTTCAAAATGACTGTCATCTCCACTCTCATAGTCACTCATCATGACTTCAGACTCCATTTCACAGCATGCTGACACATCAGAGCACGAAGCAGTGGAAGCATACACAGACATGGACATGTTGTCTACAGTGGGAGCTTCAAAGTCTCTATTGTACCCTAATGTGTAAGGAGCATAAGGTTCTCTGTAATTGCCATTGGCACCACTGGTTGTGGTCTGAGGTTCGGACATGTCTGCAGGATAGTGATGGGGAAGATACTGATTAAGGTTAAACCTCTGCCTGCTTCTTGTAGAAGAACCCAAGCTACCTACGGCTGGCATGTCTCTGGGAGGCTGTATTGACTCAAACTGGTCGCTGTATTCTGGTGGTAATGGTGGAAGCTCATCAGGTGCAGGGAAGTCATCAGGTGGAGGTGGAAAATCACTTTCTATGTCATAACCGCCAGGGTAATAGTCTGTGTCGATGGCATTTGGATCTGT---ATAGAGGGGAGCTGACTCCTCAACCACTTCATAATTTGGATATTCCTGGATACCTGGCAGTTGAACACTTGGCATCCAGTCTGATGTATCCCAGTGATAACCTGAAAAGTGAAAATTAAAAAAAAAAAGTGTTAG ......x..................................................:.:....x.......................x............................:.....:..............:.....x......:...:....::.:x:...........x..x.-...........:.:.......-.............x........x.:...x..x....:.----------..xxx:::.x..........::.:...x..x:...x..:::......x:x.-...::........x..:.::..------:.:..x.x.:.x.:...xx.....:.....:...x----------............x.--........x--:.......:.xx-......x....-.....x............xx:..................x....-.....x......................:x..:---......x.x.xxx.x..:.:.x...........:...x........:.:.-::x..:.x..:.x.x.x:...----x........:.....-...:..:.x.x....:-.....x::...........:.::..:..x:..::--------.:..x.:.....x.x:.:x.x.......:---...xx..::..x.:-------:...x......::..x:.......x:..::......::...x.------......:.-------....--------------------x..::..x..x:x::::.x:.x.x.x:x::.....------..::::.....---:...........xx.:.x..-...x..........:..:..:...........x..x..x..:..:x....x.:...:..:..:.:...:..:..:.......................:..:.......:...:.....x........:........x..:..:.....:..:.............:....:.x..x....:...x..:..:....x...x.x:......:::.x......:....::........::..x.:.:...xx.....x..x:.x.x..:........:.....:..x:x:.....:x:..x...x.:.........x.:...:..........x.:......xx.................::....x...........:.....x..x..x..:........:.:....x....x..:.....:.....x..........x...:........x..x..x..x..x..............x.....:..:..x..............:..:........:..........:---:..x.....x.::x:...x....:...:.....:..x..:x.:..:..x..::.:.....xx....:...........:....................x...x---:...:.----...:....x.::...:.. 182M1I21M1I38M10I51M1I22M6I35M10D14M2I9M2I12M1D11M1I44M1D33M3D50M1D21M4D15M1D16M1I34M8I29M3D14M7I43M6D8M7I4M20I35M6I11M3I20M1D530M3D104M3I6M4I18M 1106/1430 77.3% 1513/94230402 0.0% 117/1430 8.2% 123065537 67149018 +7121 chr4 + 190214555 186590257 186590256 186590449 193 TAGTTACTGCTG-CAAACACTGGGCGACCCAGCG-TAGTCAGTCAGCACTGGGGCAAGGCTTGACCCATTGT-TTTTAGTGAGTATCAATGAATAACTGGCATGCATAAGTCACCTCTTGGTTTGCTGAGGTCAGGAGCAGCCAAAGATTCTTTTGGTGGCAGAGT----AGAAAAAAAAGAAAACATTTGTAATTAAAA chr4 + 94230402 63524553 63524552 63524748 63524553 63524552 63524748 196 TAATCACTGCAGACAAATGCACAGCAAGCAATTGATAGTAAGTCTGTGTTAAAGCCAGGTATTAACAAAAATATTTTGGTGCATATCAATGAAC----TGCATGCAGAAGTCACCTCTTGAATTGCTGAGGTCAGGAACAGCAAAAGATTCTTTAGTTGGCAGAATGAGAAGAAAAAGGAGAAAATATCTGTTGTTAGGA ..:.:.....x.-....::.xx:..:.x.x.x:.-....x....x.:::.:::..x...:x.x.x.x.xx:.-....:...x:..........:----x.......x.............:x...............:....x...........x.x.......:.----.......::......:..:...x:...::. 12M1I21M1I37M1I21M4D68M4I30M 138/189 73.0% 196/94230402 0.0% 11/189 5.8% 123065704 67148851 +6502 chr4 + 190214555 186592667 186592666 186592852 186 ACAAGCACGAGCACTTACAACTGTACCTTCTGTGCTCACCGTGTCAACCACAGCATTGACAAGGTGCATTACGGTCACTATGGAAGCTTGCAAAAAGGTACAAAAGCAGTCAATTAGGA-ACATCTTCAGTTAGT----TAGAAAACAGTGCA----TGAAATAAAGTTTTGT---ATTATA--CCATTTCTACCTCAGA chr4 + 94230402 63527222 63527221 63527418 63527222 63527221 63527418 197 ATAAATATGAAAACATGTA--TATACCTTCTTTTTCCACCGAGTCAACAACAGCATTGACAAGGTGTATTACAGTCACTACGGAAGCTTGT-AAAAGGTATAAAAGGAGCAAATTAAAACAAACCTATAGTTAGTATCATTTTAAACAGCACACAGGTAAACAAAAATACTGTAAAATTGTAGTCCATTACtattttaaa .:..::.:..:x..x.::.--.:........x.x::.....x......x.................:.....:.......:.........:-........:.....x..:x.....::.-.x.:..x:.......----.xxx......::..----.:..xx...:.x:...---...:..--.....x...::.:.:. 19M2D70M1D27M1I15M4I14M4I16M3I6M2I16M 136/183 74.3% 197/94230402 0.0% 17/183 9.3% 123065445 67149110 +11664 chr4 + 190214555 186594931 186594930 186595845 915 ATCATTAAACTTACTA-ATTCTGAGATTCAAAAATTTCCACTAAAAACTACAT-TGTGTTACTGAATATTGACGTTTTTCTCTACTGGTATGTGTTAATATGGCAAAGCTAGTTATCAATGCAATTTACCCTATAGGGAAACCAGATCAACATAACTG--GTGGCAAAGATCCCACTGTTAAACTTTCTTCATTAGAAATATAATCAAACTTACTAGCAATCTCTTAAACTGTGCTCTGGC--AGTAC-GCTCTGATCCAAATGGGAGCTGGGGCCGCAGTGGGGTTGGGGGA-GGAGACAAATAAAACCTTGTAATACCC-AAGGTGCTACTGAAATCGAACATTTCAGACTATCACATCTCTTCTTAGAGGGGGTGTGTGTGTGTGTGTGTGTGAGAGAGAGTGTGTGTTTGTGTGCG-TGCTGCGTGGTTAAGAAAGTTGCGAGGAAGATTTCTGACAAACC--CACAAAACTGGGGTGATATTAACTGTTGTGAAAAAAAGCCAATATAAGATTAGTCGATCAGATCCTTCAATGAATATGTTCTTCTCTATTACTGACAAGTTCAAA-CACCTATTCATTAAGAACAGTTTGGCTATTTTCCCCAGCAG------ACATTCA-TGCAAGTATGTATGGTATTGTTTAAAAGTGGTCCAAGAAAAATGAAAATATGGTGAGGCTTTAAGGGTAGATAGTGCGTCTACATTGTGAGATA-------ACACAGTAACACAACAAGCAAGCAAAGCGCAGTGTTGCAGCACACT----GCTGCCTCACCATTGTCATCGCACGATTCGGACTGGAAGGAGCTCAGAGACTGCACTTCAGACAGGCTTTCCCGGGCACTGTATGGCTGGGAAGGCTTTTCCTCTAGAGGCTTCTTGGAAAGACAGGGATCAAGATCCACCACTTTTGCTAAAAGGAAGGATGACAA chr4 + 94230402 63528512 63528511 63529357 63528512 63528511 63529357 846 ATAAGTACACTGATTATATTTTGAAGGACTAGAATTGTGATTAAAAGATTTATATATATATTTTCATATTGGCTTTTTTCAGT----GTATGAATTTTTTTG------------ATTAATTCATTTTAATCATGGTGAAAGCCAAGTATACTGCTCTACTGTAATAAAATTCCTTTTTTGTAGCTTCCTTCATTACTAAAGTAGTCAAACTTACAAGCAATGCCTTAAACTCTGCTCTCACTCAGAACTGATCTGATCCATATGGGAGCTGAGGTCGCAGCAAGAAAAAGAGAAGGAAACACATGAAAC--TGTAACACCGGAAAGCTTTACTAAAAGCT---------GAATGTCAAAACTGAAGTTATAGTTG-CACAGGCAAAGGTGTTTTTTAAATCCACCGTATTCTTATATAAGATGATAACTAATTATTAAATTTGAATGTG---TTTTTAACATAGTGTTAAATACCTTGAGCTGCATTTAC------------ACATTAATAT------------TCTAATACTAGAATGAATATATA-------------GGTAATTTTAAGGTAGGTAATTAACATGAAGTGTAAGGCAAAAAACACTAACAGCTTTGAGTATTAAATACTAATATATATTAAATTGTGTAC-----------------TTAATATATA--------TTAGATGTATGTAATGCCTATTGATACTAAGACAGATTTAGATGCAGAGATGTTACAAATGAACA----GCAGTA---CAGAATGATTAGAGTTTACATACCATTGTCATCACATGATTCAGACTGGAAGGAGCTAAGAGACTGGACTTCAGACATGCTTTCTCTAGCACTATAAGGATGGGAGCTCTTTTCATCCAGAGGCTTTTTTGAAAGGCAGGGGTCAAGATCTACTACTTTAGCTGGAAGAAAAAGTTTCAA ..x.x..x...x.:..-...:...::xx.x.:....x:x.:.....:x.x:..-.:.:.xx:.xx......:.x......xx.----.....x:..xx.x..------------..:...x..x....x:.xxx:x.:..:...::.xx..xxxx..:--..:::...:x...:x:.x.xx.:...:........xx..x:..:..........x......x:........x......x:.--..x..-.x.........x..........:..:.....:::.:xx::.:..-...:...x..:....--.....:...x-..:.:x:....:...x.x---------..x.:...x.x..xxxx...x..xx.-::::x.::x:x....x.x.x.:.xxx.x:..:.x:..:.:.:x.-..x.:xx.::...xx...x...x:x.x:---...:.:...x.x:--:.x.x.x..x.:.:x::...x..------------.x:::.....------------..x:..x..xx.........:.x-------------.::..x..:..:-:.xx..x.:.x:.x...xx..xx...x.xxxx.x.:.:...------::...x.-.:.x.:...:...x:x.....x..x-----------------.x..x....:--------...::x...x:..:...x.x.xx..xx.:...:.-------.::...x:.:::x....:::.:..----.....:---...x.::x.----.:.xx.x:............:..:.....:..............x........x..........x......:.x:.....:..x..x.....:xx......x..:........:..x.....:.....:........:..:.....x...::...:..:::.xx... 16M1I36M1I29M4D15M12D44M2I81M2I5M1I44M1I15M2D10M1I18M9D26M1D44M1I28M3D13M2I23M12D10M12D23M13D12M1I41M6I7M1I25M17D10M8D34M7I24M4D6M3D9M4I167M 522/815 64.0% 846/94230402 0.0% 131/815 16.1% 123066419 67148136 +40362 chr4 + 190214555 186596525 186596524 186598130 1606 AAAAGTGGCTCTTACTGTCATAGTCAAAGTCCCAGCTAGGCTTCTGGATGGAGTCGCTGTCAGAAGGGGAGTTTGAAGGGGGTGGGGGAGGCAGGTTTGGCGCCACGCTGCAGACCGCCACTGCTTTTCGGTGCCCGTGCACAGACTCGGGGTTAAAAGTGCTGAATTCGGGATGCTCTGGGATAGCAGATCCTTCGAAGGAATTTCGGTCCAGATTGTTTCTTGAGTCACTTGGAATACTCGGGGTGTAGGAAATAGGCCGGACAGGCACCTGGGGTGGTATGTCTGAGTAAATGTTCTTATTTAGCTTGGAATCAAAATACGGTCTTTGCAAGAAAGCCGTAGCGGGTCCCAGGTGCTTGTCTTTAGGTTCAGCCTGATGCTTCTTTTTCCGACTAATCATCTTACGGCAGAGAACAAACACCACCACCAGTAAAAATATCCCTGCAACAAACACAACGATTCCAATTCCTTCCGCCAACCCAATGTTCCACGGCGTGGACACATACTGGTTGGGCGCAGCATCCTCGCAGTGACGTCCCCTGTACTCGTGGCTGCAGTTGCAGTGATAGGAGCCGTGCGTGTTCTCACAGAGGGCCCCGTGCAGGCAAGGGTTTCCAGAGCACTCGTCGATATCACTCTGACACCTGCCAAGGAAGTCAGGAATGAGGAGAGACCTCTGTAGCATACGCCAGCGTATGTCAGGCTCAATCCTTAGAGACTGAAGACTAATCCCTCCTTGATGAGCTATGTGAAGATCAAACCCAGATAAAAGACAACTAAAAAATGTAACGTCGACAACCACGAGAAAAGACCTTCTGTGGAGAAACCAATCATGTGATCGCATGCTTTTGATGTATATTTGGGAAGGAAACATATCAAGCCAATATTAATGGCCATTTTCCTAGGATCAACAGACTATTACATCAACCCCATTGGCTAAACATTAGTTTTTTTCAAGTATTATATATACTGTATTCATCTGCTTGATAATTCATTTTAAAGAGTGAAAAGATTATAAATTATATAAGGGGCCAATATGAGGATTATCAAAATCTGACATAATGTAGTTCAAATCACTGAAGGTCTGTTGCATCTGCCAGTCAATATGACGCTATGAAAAGGTATGAACCTAAATTTTGAAAGAAACCATTTACCTTTCTCCCCTAAAACCCGAATCACACTGACAAACGGCGCCATCCAAACTGTCAAAGCATGTTCCGCCATTCTTACAGGGTTCATCTTTGCAGTATGGACTAAGCTGACACCT---GAAGAGTAAGGAGA-----AACAGACATAAACCTCATGATCCTATTGCAAA---------------TAAATACAGCAAAACAGAAAGC----------------AAAACAGAACACATTAGCAAATT--AACGTGCAGACTTT--------------------------TTACATGTACCATTATATGTTTAAGAATTTTATACTACAA----TTGATTATGAAAGTTAAGAAAAATACACATACCTCTGACCAGTATATAATCCTCTACACTGGCAAACAAAGCCTCCGTTGTCGACAACACACGTGCCCCCATAGAGGCATGGCTTGGAGGAACACGGATTGACGCTTATCTCACAGTGGGTCCCTATGTACAAGGCACTGCATTTGCAGTAATAACCTAAA chr4 + 94230402 63529576 63529575 63530941 63529576 63529575 63530941 1366 AAGAATGTTTCTTACTGTCATAGTCAAAATCCCAGCTGGGCTTCTGTATCGAATCGCTGTCTGAAGGAGAGTTGGAGGGAGGTGGAGGTGGCAGGTTTGGTGCTACACTGCAAACAGCTACAGCTTTCCGGTGGCCATGCACAGAATCTGGGTTAAAAGTACTAAATTCTGGGTGCTCAGGGATCGCGGACCCCTCAAAAGAATTCCTGTCAAGATTGTTCCTGGAGTCGCTTGGAATGCTTGGAGTGTATGAAATGGGACGAACAGGAACCTGGGGAGGGACGTCAGAATAGATGTTCTTATTCAATTTTGCATCAAAATAAGGTCGTTGCAAGAAAGCTGTTGTAGCTCCCAGCTGCTTGTCTTCAGGTTCTGGTTGGTGTTTCTTCTTTCTATTCATCACTTTGCGGCAAACAACAAAAATCCCAACTAACAAGAATATTCCAGCGATGAAAACAATAATTCCAATTACTTCAGCTAAACTAATGTTCCAAGACGTTGAAACGTATTTGTTAAGAACAATGTCTGTGCAGTGCTTTCCTCCAAATCCATGGCTGCAATTGCAGTGATATGAACCGTAAGTATTTTCACAAAGGGCACCATTAAGACAGGGGTTTTCTGTGCATTCATCGATATCAGTCAGACACCTACCAA-------------AATAAGAGA-------AACAATGGTTAGTTTACATCAG------------------------TAATCACTGCTTTAGTCTCCTTGT--------------------------TCAACAATTCTAACTACGTTTACTATG------------------------TAATAATGT-----------------------------------------------ACACTACCAGCTAACTT--------------GCTATTCTATCA---CCATT---------CCAGATTTCT------------------------ATCAACTTGA-------------------------------------------------------ACTGTTA-----------AATATTGATTAAAT-------------TTCCATTT----------------CTGTGGAATGCTGT-----------------------ACTCACCTTTCTCCCCGAAAGCCTGCTTCACACTCACAAACAGGCCCATCCAAACTGTCGATGCACTTGCCACTGTTTTTACAAGGATTGTCTTTGCAATATGGACCCAGCTGGCACCTTCAAAAGAGGAAAAAGATCAATAACAACAAAAAGAGCAACTGTCTCACTGTAAGTTGTGTAAATGGTATTAGATATAGTGGGATTCAAGGCTGCTATATAGGGGCTGACAATAACCAACTCCAGTGGATTTCAAAGTGTGAACTTTAAGTAGAAAAGAGATTAAAAAAAAAACAACAGAGAAGGTGCTATATTTA--TATTCTGTGCTGTAAGGGGTTCATTTGCACAAAAAAACCATACAAACATACCTTTGGCCTGCGTACTGTCCTCGGCATTGACAGATGAAATCATCACTGACTGGGATGCAAGTACCTCCATAAAGGCAGGGATTGGAAGCACACGGGTTGACACTTACATCACAGTGAGTTCCCATGAATAATGGAGCACACTTGCAGTAGTAACCTGAA ..:.:..x:...................:........:........x..x..:........x.....:.....x..:..:.....:..x...........:..:..:.....:..x..:..x.....:.....x..:........x..x...........:..:.....x..:.....x.....x..:..:..:..:..:.....:.x...x........:..x.....:........:..:..:.....x.....:..x..:.....x........x..x.:...x..:..:...........:.::..x.x.........x....x............:..x.::.x......x..........:......x.x:..:..:.....:..:.x.:.x....::..:.....:.x......x.:.x.x..:.::..:.....:..x..:.::..x....::.........x....x..:..x.:.........x.:...x..x..:..:.x...::.x:..:::..:x:......x:x...:.::x.::.:........:...........x..:....:x..:..:.....:.....x..:.xx..:..:......:.x.x...:..:.........x..x.......:....-------------:.x:.....-------.:..xxx.::..:x..::....------------------------.....x..x...x.xxxx.:x...--------------------------::..x..x.x....xx..x:x..:.:.------------------------:...x....-----------------------------------------------.:.:..x::..:.x:..--------------:.....x:....---.....---------::..x...:.------------------------...x:.....-------------------------------------------------------.:.:.:.-----------...:.x.x.:....-------------..x...:.----------------..:..:..x.x.:.-----------------------.:.:............x...:..:.xx.......x......:.xx..............:.x...:x.x..:.::..:.....:..x.::........:.......:x.....:.....---:.....x..::...-----....:xx.x..:xx:x.:x:..::.:..:..:---------------..:...:..::::.:xx..:..----------------.x..:.:xxx..x::..:::...--..x...:::.....--------------------------:x...x:x.xx:.xx...:....--x...:.:.:..::..----..x...xxx.x.:xx..:xx.x.:.x........:..:..x.::..:x:.....x:..:..:..:.::..::.x:.::..x.x:x:.::..x..:..:.....:.....x..x.....:.x......:.....:....:x........:..:..:...x.:..x.x.x::..:........:......:.. 654M13D9M7D22M24D24M26D27M24D9M47D17M14D12M3D5M9D10M24D10M55D7M11D14M13D8M16D14M23D119M3I14M5I32M15I22M16I23M2I14M26I23M2D15M4I191M 911/1295 70.3% 1366/94230402 0.0% 382/1295 29.5% 123066949 67147606 +27112 chr4 + 190214555 186599806 186599805 186600363 558 AAAAGAGAAAAAAAT--AAAAAAATACCTGGGGAGCTTCCCCTTAAATGTACACACGTGCAGCA----TTTTAAAGA-TGGCAACATTACGGAGCCCACCTCCAGCAGGTGACGGATTGCAAACGCCTCCATTCTGGCAAGGGTTGCTGGCGCAGTCTTCCGTGGCCGTCAGGAAGCAGCCTGGAGATACATCCACCGACTCTTCGATGTGTGCATAGCTTCTGGGTTTGCTGTTTAAAGGGAGCTCCTGCCCATTCAAATAAATGGAGTCCATACAACCCCTGAAACCATTACCAACTTGAGGACTTCTTCCATGCCTTGTTCCCTGCTGACGGATGTGGCCACCAAAAAACACATAGTTATCCAGGTTCAGGGTTTTCAGAGTCCCTGGGGCTGTGCCCGATGCAGTATGAACTTGGTCTAGAACCAAGCGAGCATAGTTTCCATTCACTTCCAGGGCCACTGCGTGCCACTGCCCATCATTGACCTGAATGCTCTGAACAGAGACAATTCCAGGGCCACTTCCACAGTCAAACTTGTACTGCAGCCTTCCATGATGAATCTA chr4 + 94230402 63531352 63531351 63531904 63531352 63531351 63531904 553 AAAAGCAAAAAGTATTTACAAAATTGTTTGGG-------CCTTCCAAGGCAGGTAAGTGGAAAAGCAGTTTTAAAAACTAGCAGAAC-----AGCTTACCTCCATTTGACAGGGCGTTGCAGATGCCTCCATTCTGACATGGGTTGCTTGAACAACCTTCTGTGGTAGTAAGTATGCATCCAGGAGTCACATCGACAGATTCTTCCATGTGTGCATAATTTCGTGGCTTGCTGTTTAAGGGGAGCTCTTGTCCATTAAGTACAATAGAATCCATGCAGCCTCTGAAACCATTGCTAACCTGAGGACTCCTCCCATGTCTTGTACCTTGTTGCCGAATATGACCACCAAAAAACACATGATTATCTAGGTTCAGTGTCCTAAGCGTACCAGGAGCAGTACCAGATGCTGTATGCACCCTGTCCAGAACAAGTCGTGCATAATTTCCATCTACTTCAAGAGATACTGAATGCCACTGGCCATCATTAATTTGAATGCTCTGAACGGAGACAATGCCAGGTCCGCTGCCACAATCAAATTTATATTGCAGCCTTCCATGATGAATCTA .....x:....:x..--.x....x.:::....-------..:.:x..x.:.x::.x...x.:x.----.......:.-.:...:x.:-----...::.......x:x.::::x.x:.....:.:............:..x........x.x:..::....:....:x..x..x.x...x..x....x:.....x..x..:.....x...........::...xx..:...........:........:..:.....x.:xxx...:..:.....:..:..:...........:.:...:........:..:.....:.....x..:..:..x..:..:..:................::.....:........x..::.x..x..x..x..:..x..:..x.....x.....x..::x...:.....x.:x..x.....:.......::.....x..:.x:....x:........x........:.::..............:........x.....x..:..x.....:.....:..:..:....................... 15M2I15M7D25M4I9M1I9M5D473M 408/546 74.7% 553/94230402 0.0% 19/546 3.5% 123068454 67146101 +46246 chr4 + 190214555 186603173 186603172 186604011 839 TACCTTTGCAGAGACACACCGCTGCCCTGTGGTGGCGGGGAGTCACAAAACTCAGTCTGGCTGTGCTGTGTGTTGACATCACACTTTCATCCACAGACACCTTTTCATCGCAGAACTTCCAGGGGCAGTCCAGTCCCGCGCAGAGTTTCTGGAATACATTCAGTATCCTAACTCCAATGATTTCCTCAATGTCAGTCACGGAAGAGTTAATCTTGTGCAGAAGTTGTTTTGTTGAGATCTGAGCACTACCTGGTTTCTCTACAAAAAGTAAGACGTCCAGATGTGGGTGAGGTTCAGAGGACTGCAAACTAACAATCTGTATGTCGTTCCTCCTCACACCCAGGATGTTCCGTAAAGCTCGCTGGAAGTTGCGCCAGTAGTCACCAACGAATTCTTCCGGAGTGAGGTTGGCAAAGCGGATCGCGATGGTGTGGTTCAACATCTCCTGTGTGACTTGTCTGATATGCACTGTGATGTCGGCCACCGTCGTGAACTTCCCATCTGTTACGCTGACATTGAGAAGGTATTGCCCTATGTCTAGCTTTTTGTGTGCTATCAGCTTGCCCCCTGTGCTGGAAACAGAGAACAGGTTGTCCATCTGAGGGTCGAGACTGTAGGTTAGAGTATCATACACGTCCTGGTCTGTGGCATGGATCTTCCCAATGACGCCACCTGAGTATTCTTCTCCAGAAGAGGTGATGAAAATCTCCAGGGGCAAAATCGCAGGCGGATAGATGCTCTCCTCAATTACCCTAATGTCAATGTATGTCAAAGATGACAACTGAGGCTTTCCATTATCTGCCACCTACAAGAAAAGAAAAATAAAATCACCTTTGTCT chr4 + 94230402 63533625 63533624 63534463 63533625 63533624 63534463 839 TACCTTTACAAAGACAAACTGCTGCTCTGTGATGACGGGGAGTGACAAAACTCAGCCTGGCCGTGCTGTGAGTTGACATGATATTCTCATCCAGTGTTACTTTTTCTTCACAAAATTTCAAAGGGCAGTCTAGGCCTGCACAAAGCTTATGGAAAACATCAATTATGCGGACACCTAGAATCTCCTCTAGGTCAGGCACAGAAGAGTTTATCTTGTGGAGCAAAATTCTCATTGGATGCTGAGAGCTGCCAGATTTTTCAATATTCAAGAGGACATCGAGGTTTGAAGGACGATCAGAAGGCTGCAAACTAACAATCTGGATGTCGTTTCTCCTAACACCTAAGATGTTTCTTAAAGCTCTCTGGAAATTGCGCCAGTAATCGCCAATGAATTCTTCAGGAGCAAGGTTTGCAAAGCGTATTGTAATGCTGTGATTTAGTAAATCTTGTGTGATTTGTTTGATGTGCACAGTAATATCAGCTGCAGTTGTAAATTTTCCATCCGTAACAGTGACATTCAGGAGGTATTGTCCCACGTCTAACCTTTTATGTGCTATTAGTTTGCCTCCAGTACTGGAAACAGAGAACATGGATTCCATTTTGGGGTCCAGGCTATAAGTCAAAGTATCATAAACATCTTGGTCAGTTGCATGAATTTTTCCAATGACACCACCTGAATATTCTTCGCCAAAGGCTGTAATGAAGATTTCTAGGGGCAGAATTGCTGGAGGATAAATGCTTTCCTCAATAACTCTAATATCAACATATGTCAGAGATGACAACGGTGGCTTTCCATTATCTGTGACCTAGTAGAAGACAAAGGTATAATTAGATTTTTTT .......:..:.....x..:.....:.....:..:........x...........:.....:........x........x.:.:.:.......xx.x:..:.....x..:..:..:...x.:........:..x..:..:..:..:..x.....x....:x.x...x.x:..x..x.x:..:.....x.x.....x...:........x........x..x.:xxx.:.::...::xx.....x:..:..x.:...:..x.:.xxx.:x.:...:..x..:.x..::x..x.x.....:.:..................x........:.....x.....:.:......:.x........x......:...........:..:....:.........x....::.....x........x..:.::...x....:..:.::.xx..:.......:....:....:.....x..:..:..:..::.x..:..:..:..:.....:..x..:x.......x..:........:..:.:.....:.:....:........:..:.....:..x..:................x.xxx.....:.x:.....x..:..:..:..:.:.........x..:..:.....x..x.....:..:..:........:........:........x...:.:.xx..:.....:..:..:.......:...:..x..x.....:.....:........x..:.....:....::.......:..........x.x................:x.....xx....:.x...::..x...:.xx...x.:. 839M 632/839 75.3% 839/94230402 0.0% 0/839 0.0% 123069548 67145007 +10240 chr4 + 190214555 186604352 186604351 186604675 324 AAACCACAAAG------AAAGCCAT---TCATACCTTCACCTGCAGTAAGTAATGATCTTTCTCCTTCCTCTTGATGGCAGATGATGTCAGGAGGACTCCTTGCGGGTTAACTTCAAAAGCCTTCTCATCATTTCCAGTTACAATAGTAAAGAAGAAGGGTGGACCGTTATGGGAAGAATCCTCATCTGTTACTACCAGCTGCAGCACGCTGAAGCCCACTGGCTTATTTTCCTGCACAAGATTAGAAACAAAATTAAACAAAAATCCTGGAACACAGCCAAATCTATATGGGACAGACACATGAGTTTTCTATAATATAAAATACATACAAA chr4 + 94230402 63538814 63538813 63539134 63538814 63538813 63539134 321 AAACTACAAAGCAGCTAGAAGCAGTGTATCTTACCTTAACATGTAGTAAGTAGTGATCCCTCAATTTGCGATTCAGAGCAGCAGTTGTTGTCAGTACTCCTTGATGGTTAACCTGGAAAGTGTTCTCTTCATTTCCGCTCAGAATGGTGAAAAGAAAAGGAGGACCATTGTGAGAAGAATCCTTGTCTGTCACCACCAGTTGAAGCACACTAAATCCAACAGGTTTATTTTCCTATAAATGCAT---AACACAATC--ACATTAGTTTTGTTGCACTTGGACATATATATTG-------ACATTAATTTTTCACAAAAAGAAATAAAACCAAA ....:......------:....x:.---..x......x..x..:........:.....::..xx:..x.xx..x.x:....xx.x...::xx..x........xx.......:.x:....:x.....x........:x.:.x...:..:..:.::..:..x.....:..:..:..........::.....:..:.....:..x.....:..:..x..x..x..:..........::.x.x.xx.---....x...:--...xx.:.::..xx:...xxxx.x..x.....x.-------....x.:....::.:..x.x:.....x.xx.... 11M6I8M3I216M3D9M2D34M7D34M 216/312 69.2% 321/94230402 0.0% 21/312 6.7% 123065538 67149017 +3636 chr4 + 190214555 186605366 186605365 186605549 184 TGGAGGGAGGAG--GAGAAAGAGTGGAGACAGTGAA-ATGGGGAGGAAGTGGAGTAGGGAGGAGGTTGGGGGAGGAGGTGGAGTGGGGAAGAGGCAGAGTGGGGAGGAGGAAGAGGAGGAGTGGAGAAGAGGTGGAGGGAAGAGG---AGGAGTGGGGAGGGGAGTGGGGAG-------GAGGAAGAGAAGGAGGAG chr4 + 94230402 32265468 32265467 32265661 32265468 32265467 32265661 194 TGGAGGGTGGTGCTGGATAAGGGGGGATGCAGGGAGCATGGAGAGGAGCCTTTGTGAGGAGT--GTGAGGGGGGGAGCCCGGGGAAGGAGAATGCA-CGTGCAGTGGAAGGAAGAAAAGAGAGGAGAGGAGAGGGAGGGAAGAAGGAAAATAATAGAGAAACAGGTCAGCAGCTGATTTGAAACAGAGAAAAAGGAG .......x..x.--.::x...:.x...x:...x..:-....:.....:x:xxx..::....x--..x:....:....x:x.:.x::...::.x...-x...x:.x...:.:.::::.:...x.....:...:x..........:.---.:x.:.:.:..::x::..x:.x..-------..::x......::..... 12M2I22M1I25M2D32M1D48M3I24M7I18M 113/181 62.4% 194/94230402 0.0% 16/181 8.8% 154339898 35874657 +8553 chr4 + 190214555 186606063 186606062 186606234 172 AGCCCACCTGGATAATGACACTGTAGTTTCCCCTGGAGAAGACGGGCGCGTTGTCATTGACATCGGACACATCGATGTTCACGGTCGTCGTGTTGACTCTGGGTGGACTGCCATTATCAGAAGCTTGAACCGTGAGCGTGTAACCTGAAATCTTTTCAG-----GCAAAAGACAGAA chr4 + 94230402 63541102 63541101 63541278 63541102 63541101 63541278 177 AGCTTACCTGGATGATAATGCTATAGTTTCCTTTTGAGAATACTGGAGGATTGTCATTTACATCAGAAACATCAATGTTAACCGTGGTAGTGTTACGTCTAGGTGGGCTTCCATTATCTGAAGCTTGAACTGTCAAGGTATATCCTGAAATCTATTTAAAAATTAAAAAAAACAAAA ...::........:..:.::..:........::.x.....x..x..x.x:........x.....:..x.....:.....x..x..x..x.....:xx...:.....:..x........x...........:..x.:x..:..x..........x..:.:-----:x....:...:.. 159M5I13M 129/172 75.0% 177/94230402 0.0% 5/172 2.9% 123064961 67149594 +19055 chr4 + 190214555 186609177 186609176 186610017 841 ACTTACCGTTTCTCGGTCGAGAAGTTTGGTCACTTTGACTTCTCCCCTGACGGGGTCAATTGTGAACGAGCTTCCTTGGTTGCCATCTATAATTGAGTAGTGGATGTGGCTGTTGGAAGGTCCATCGGCATCATCGGCCATAACCTAGAACACACCACACTCCTGTTTAGGAGACAGCTAAGAAGAGGCCTAAACCTATTACACAAAATTTGTGATATTAATAGCTTAGCTGTTTCTTTTTGT-------TGTTGTTTTTTTTTTGAGATGGAGCCTTGCTCTGTCACTCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACACCATTCACCTGTCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTTTTGTATTTTTAGTAGAGACAGGGTTAGCTTAGCTGTTTTAACACAATTATTCATAACAAAGTCAGCAATCAGTTGGCCTAACAAAAGACACTTTCAAATC------TCCAAAATATTTACAAAGGCCGCTACA--------------AAAA--CTAGATTGATTT---------------TACTAAAAACTTTTGCAAAGATCCAGAAGAT----------ACACAGT-TTTCACTGTAATGGGGAAAAAATACACACCGTGATGACAGACTGCTCAAGAACGGCATCTTCACTGATGACTGTCGTGTAGGTGTCTTGGCTGAACACAGGGGTATTATCGTTGATATCTGTTACATTAACGTTCACAGTGGCAACGTCGCTCAGTGAAGGCGTGCCTCCATCAGTGGCCTCTACTGTTAGGTAATACTCATGAGAGCTCTCATAATCCAGATTCTCAATGATAAATACGGCCCCT chr4 + 94230402 63542091 63542090 63542866 63542091 63542090 63542866 776 ACTTACCTTTTCTCGGTCCAGAAGCTTAGTCACTTTTATTTCACCCCTTGAAGGGTCAATTGTAAAAGGATTTCCCTGATTGCCATCTGTAATTGTGTAGTGAATGTGGTTGTTTGAAGGTCCATCAGCATCATCTGCCATAACCTAAGGGAAATTAGTGTCAT--------------TAAAAAAAGGTCCA---------CACAAACTCTATCATCTG------TCAGACAATACATCCCGTAAATGAATATGGCTATTTTCATCTAATATA---CTACCATATTACACAGTT------------------------CTTAGGAGAAACGTCTTACATTAGGAACATACCAACAAC--ATTTAAGTTTTGGAAAAAAATCAGA----------------------------AAATTATTCCTGT--TTTCATGAGAAG---------------------AACAAAATATATCATAAAACATT-----ATCTACTTGCCCATAGTA------TTTCAAGTCACTGGCTCCAAAACTTTTTCAAAATTCATTTCATTTCACTCAGTGGCAAACTTCTTCATTAATTTATGCCCATCTTCCAATCATAAATTATTCCTTTAAGACTGAAAGCATGGTTGTTGTAACAGAGTATTTCAAAGGAAAAAAGTGAAAATACATACTGTAATGACTGATTGTTCAAGCACAGCATCCTCACTGATTACTGCAGTGTACGTGTCTTGGCTAAACACTGGAGTGTTGTCATTGATATCTGTTACATTAATATTCACTGTTACGACATCACTTAATGAAGGTGTGCCTCCGTCTGTGGCTTCTACTGTCAAGTAATACTCATGAGAACTTTCATAATCCAAGCTGTCAATGATAAAAATGGCTCCT .......x..........x.....:..:........x.:...x.....x:x:...........:..x.:::....:..:.........:......x......:......:....x...........:........x...........:::x.x.::.xxx..x.--------------...:..:...:.:.---------......x.:.:.x..x.x------.:..x::x.x.x.:::..-------.:.x.:.x....:x.xx:..:x.---:.:.:x.:.:..x...x:------------------------..:.xx:x..:.x:.x:x:x:.:..xx..:....x:x..--:.:.x..::.:xx:.:x.:x.x:..----------------------------..x..x..::...--...:.xx...::---------------------....x...xxx......x.x.x.-----...x::.x...:.xx:x.------......:..------.......:x...x....:x:.::.x..--------------...x--..xx...:....---------------.xx....xxx..::x:x....::x.:.:x..----------...x...-.....xx.x..x:::.x:........:..:..:.....x..:..:.....x..:.....:........x....:x.....x...........:.....x..:..:..:..:...................::.....x..x:.:..:..:..:.:......:........:..x.....:........:.:...............:..:..........:::.x...........x.:...:... 164M14D14M9D18M6D18M7I23M3D18M24D39M2D25M28D13M2D12M21D23M5D18M6D9M6I27M14I4M2I12M15I31M10I7M1I246M 500/721 69.3% 776/94230402 0.0% 175/721 24.3% 123067086 67147469 +19962 chr4 + 190214555 186611382 186611381 186611779 398 TTACCTGTTTTAGAATCTATGCTGAATTTCCCATGTTCATTTCCACTTATTATTGAGTAGGTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTGCATACACTTGAAGAACTTCAGTTCCAACAAGAATGTCCTCAGACACGGTGGCACCATATTCACGGTACTCAAACACAGGGGGGTTGTCATTTATGTCAAGAACTGATACAATCACAGTGCCAGTGGCAGTCAGCCTCCTTGGCAAGCCTTGATCCACAGCTTTCAAAGAGAGGGTGTATACTGCCTGGAGTTCTCTGTCCAAAGGTTTTTCTAACTGAATAATTCCAGATAATTCGTTAATGGAGAACTGCCCATCAGCAGAGTCAATCAGTGAGTATAAAATCTTCCGATTTAATCCTAT chr4 + 94230402 63544219 63544218 63544616 63544219 63544218 63544616 398 TTACCTGTTGTTGAATCAATACTGAATTTTCCATGTTCATTCCCACTGACTATTGAGTATGTGATTTCAGCATTGGCTTCAATGTCCCTGCTTGCAGCATGGATCTGGAGAACTTCAGTCCCAACCACTGTGTCTTCTGATACACTTGCACTGTACTCCCTATACTCAAATACAGGTGGATTATCGTTTATATCCAAAACGGAAACTATAAGATTACTTGTGGAAGACAGCCTTCGAGGTAAACCTTCATCTGTAGCCCTCAAAGTCAGTGTGTACACAGCTTGCAACTCCCGATCCAAAGGCTTCTCCAACCGGATGATTCCAGAGAATTCATCAATAGAGAACTGGCCTTCTGCAGAGTTCACCAGCGAATAATGGATTTTACGGTTCATCCCTGT .........x.x.....x..:........:...........:.....x.:.........x........x.....x........:....x:.....x....:x.::..:...........:.....x.xx:....:..x..:..:x.x....::..:..x.x:........:.....x..:..:..:.....:..x.:...x..x..x..x.x.x.:.:x....x..x......:.xx..:..:....x...:::...::......xx..x.....:..x..:..x.::..:.x:........:..:..:...:.:..:........x.....:.:...:........x..x..x.......:x.:...:..:..xx::..:..x..:..:.x:...:. 398M 290/398 72.9% 398/94230402 0.0% 0/398 0.0% 123067163 67147392 +3021 chr4 + 190214555 186611385 186611384 186611480 96 CCTGTTTTAGAATCTATGCTGAATTTCCCATGTTCATTTCCACTTATTATTGAGTAGGTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTGCA chr4 + 94230402 63569446 63569445 63569541 63569446 63569445 63569541 96 CCAGTTTTCGGTTCAATAAAGAATTTGCCATGTTCATCTCCATCTTCAATGCTATAAGAGATCTCTGCATTGGGGCCTTCATCCTTATCTGCAGCA ..x.....x.:x..x..:xx......x..........:....::.x:x..xxx:..:.x...:........x.xx:.xx:....:x.::...x... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 123041939 67172616 +3946 chr4 + 190214555 186611419 186611418 186611612 194 CATTTCCACTTATTATTGAGTAGGTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTGCATACAC-TTGAAGAACTTCAGTTCCAACAAGAATGTCCTCAGAC------ACGGTGGCACCATATTCACGGTACTCAAACACAGGGGGGTTGTCATTTATGTCAAGAACTGATACAATCACAGTGCCAGTGGCAGTCAGC chr4 + 94230402 54173791 54173790 54173984 54173791 54173790 54173984 194 CATTTCCTTCAATTATACTGTAAGCTATTTCACCATTCACTCCTGAATCTTTGTCAGTAGCATGTACCTTAAAGAACCGTGAATTCACTGG-------CTCAGACTCCAAAATTGTAATTTCATAGGAAAGCTGGTCAAACACAGGAGGGTTATCATTTACATCATGGACAGAGACAGTCAGGACGAAAGTAGAGGACAGC .......x::x.....xxx...:.:x.....xx....::..:.x:x...::x:::x.:x....::..-..:......:x:::x.:..x:::-------.......------.:x..:::x:....xxx.x.x.:x...........:.....:.......::...x.:..x..x...:...x:::.xx...:.x:.x.... 67M1I23M7D7M6I90M 113/187 60.4% 194/94230402 0.0% 14/187 7.5% 132437628 57776927 +15794 chr4 + 190214555 186613105 186613104 186613360 256 ATACCTGCGTCGGCATCTGTGGCCTGCACTCTTGTCAGCAGCGTTCCCGGCTCTGTGTTTTCAAACACGGTGATGGCATAAGGATCGGCAGAGAATTCGGGGGCGTTATCGTTCACATCTTCTAGCGTGAGCACAATACTGGCTTGGCAGAATCTTCCTCCTCCATCTGTGGCCCTGACGAGAAGATGATAAACAGCTTGCTCCTCACGATCAAGGGGGGTTGACGTTTTCAGTTCACCTACAAACAAA--AACAAAT chr4 + 94230402 63545908 63545907 63546165 63545908 63545907 63546165 258 ATACCCGCATCTGCATCTGTTGCTTGCACTCTCGTCAAAAGCGTTTTAGGCTCTGTGTTTTCAAATACTGTAATGGAGTAAGGATCAACTGTAAACTCTGGGGCATTATCATTCACGTCTTCTAGAGTCAGAATAATATTAGCCTGGCAGAATCTCCCTCCTCCATCTGTGGCTTTCACTAGAAGGTAATAAACTGCTTGCTGCTCACGGTCCAGTGGCATTAATGTTTTCAGTTCACCTATAAACAGAATAACAAAT .....:..:..x........x..:........:....:x......::x.................:..x..:....x:........::.x.x:..:..x.....:.....:.....:........x..x..x.:....:.:..:...........:.................::.x..x.....:.:......x.......x......:..x..x..x:..:.:................:.....:.--....... 249M2I7M 205/256 80.1% 258/94230402 0.0% 2/256 0.8% 123067197 67147358 +10363 chr4 + 190214555 186614184 186614183 186614498 315 TCATTACCTGTGTCTGGATTTAGTTTGAATTTTTCTGCACCTGAACCCAATAACGTGTAAGTAATTTCAGCGTTAGAGCGGATGTCTGCGTCTGTAGCAGAGATCTGCATGATCAATTTTCCAGGAAGGACGTCTTCAGGAATAGTGTCTGAATATAAAGTCTGCAAAGAGTTTAAA-------CAAAAACGTTACATAAAAGCATTAACAGGC------AGCACAAACATCAAGGGAATAATGGAAAAGAAATCATTCATCTTTGACCACAGAAAACATGGGAAATGA--CTAAAGATAAAATCCCAAGAGCTTTGAAAAC----GATTTTTC chr4 + 94230402 63547286 63547285 63547616 63547286 63547285 63547616 331 TTGTTACCTGTGTCTGCAGTGAGTCTGAACTTCTCCGCTCCAGGGCCATGTAATGTGTATGTAATTTCTGCATTGGAACGAATATCTGCATCTGTAGCAGATACCTGCATTATCAGTTTGCCAGGAAGGGCATCCTCGGGAACAGTATCAGTGTATAAAGCCTGAAAAAGTTTTAAATTTCATTCAAAGACTTAACAC-ACAGAGTAAATAGGCTTGGAAAGGGGATGCAAAGAGAGAATGGCAGTTGAGAAAATATT--GTTTTAGTATTTGGGAACACGTGAAGTGAATCAGAGGATGAAATACTGAAAATGATAAGGACTTATGATTTTCC .::.............x.x.x...:....:..:..:..x..x.::..xx:...:.....x........x..:..:..:..:..:.....:...........x.:......x....:...x.........:.:..:..:....:...:..x.x:.......:...x...::x......-------....:..x.x...:-.x..x:.x..:....------..x:x.x:..xx:..:....::::.xx:.....x:...--x:...:::xx:x.::....:.x...:...--.x:.:...:....x.::.:.::xx.:.::..----......:. 177M7I14M1D15M6I38M2D29M2I31M4I8M 211/312 67.6% 331/94230402 0.0% 22/312 7.1% 123066898 67147657 +235878 chr4 + 190214555 186616998 186616997 186621792 4795 TGCTTACCTTTTCACAAACTGGACTGTTGTCATTTGCATCCAGAACTTTCACTTCAACTATCGCTTTTGATGAGAAGGTGCCATCAGTTGCCGTGATAGTAAGAAGGTAATTGTCCCTTTTTTCCCTGTCTAGAGGTTTCTTCACATATACCTTCCATTCATTCTGTATAGTTTCAACGGCAAACTGTCCTAAAGGATCCCCTCCTA------------------TTAAATCAATG---GAGGAAGA------------------TAATAATCAAATTTGTTGAAAGGATAAAAATAAGTAACA-----------------------------------------GAAAAAAT---AAACTGTACAAAAGATGTATAATGTTATA----GTTTAAAAG-----AATTGAGTATTAAAAGAATTAATTTGG-----CATATATTAGCCTTCCAATTTACA----AAAACA---------AGGGCAGCATTAAAATGCATAAACATAGCA--------------------------------------TTAAGACTACTAATCATTTAGCCTGCATTAAAACTATAGATGTTTTTA---ATTATATTTATTATACACTAAGTATAAGGTTCAAAAGAATGAGTC-------ACAAAAATCAAAAA-------------CAGTCTAATGAAACAACTGGTAGCTTTGCTCA--------GGTAACAAGCTTGAAATGAGGCTCAACAGATGTTATTTCTACGTA------TTATTTTAGATATTTTTAACTAAAATCATCCCTTAAATCCCCAATTTCCATACAATACAGATCTTATACTTTATGCTTCTAAAAATCATTTT--AAATTAATTAAACCGTTTGGTATGAATTTTTTTTACCTGTTATGAAATATGTAACTTGTCTGTTGATCTCTTCAGAATCAGCATCCGTGGTACTTAAGATGGCAATCACCCCACCTTGGGGGTCATCCTCACTCACAGTCCCTTTATAGATCTCGGCCGTGAATCGTGGTGGACTATCGTTGACATCGGTGACGGTAACATCCACAATGGCTGTGGAGGATAGCTGGATCTTTTCACCATGATCTGATGCAACCACTTTAATCTGGTAATTGTCTCTCTTTTCATGGTCAAGTTCCTTTAAAGTTGTAATCCAGCCTGTTTCCATGTTAATGGCAAAGGATTCAATGACTTCCACACTTTGTGACTGATCCAGGCTATACATAACTTGGCCGTTGGTTCCTGAGTCAGCATCAGATGCCCTGATCTGAATTACTCTACTTCCCCCTGGCAGGTTTTCAACAATGAATGCCTCATATGGACTAGATTCAAAGACCGGGCTGTTGTCATTTGCATCTTTCACTTGGATACTAACATCTACAGAAGCCACCATCTCATGGTCATCTTGAGTGCACCTGGCCAGTATGGAAAACTGATACCACTTAGTTGTCTCATGATCAAGACTCTTCTCCAACTTCAGTCTCCCGCTCTGTCTGTCAATCACAAAGGACTCATCCCTATTGCTTTCTGGAGTATTCCCTTTGACCAGGCTGTAAAGAACAGTCCCACTATGTTCTGCTCGGATGAGATCTATCTCTGTTCCAATAGGCACGTCCTCTGACACTGTAAAGGTATAGAAAGGTTCTGAAAATTTTGGAAGCTGCATTTCCGGTGGAAGGATTTTAACATAGACAAGAACAACAGATTCTTTTGATGGAGACCCATTATCCACAGCTCTAACAAAGAAAGTGAAGAATTCATTTTCCAAGCCAATGAGGCTCTCCTTTGTAGTGATTACGCCGGACAGTTTGTTAATTTCCAAATTCTCTTTTACACTTTCAGAGTCTGCTTCAATGGCATAGGTGATGTCGGCATTGGAGCCCTCATCGGCATCACTTGCAAGAACTTTAACGACTGAAGTCCCTTTAGCAGCACTGGACCCGATATTCACTTCGTATTTGGTTGCTCGAAATTGTGGTGCATTGTCATTGTCATCTGTAAGGATGACATTCACGGTGCAGAAAGCAACTTTTCCTCCAGCATCCTTAGCCATTAAACGGACTGAGATCACTTTCTCCGCCGGGGTTTCTCGATCAAGTTTTTCCAAAGTAAATATCTGTCCTCTCTCATTTATGTAAAATCTGTCTTTGGCAAAGTCATTTACAATATGGTAAGTAACGTGACCATAAATACCAGAATCCCCATCCGTAGTTTTCACCTCCATCACCAGGGTATGTAGGGGAGCGTTTTCAGCTAGTTCCACTTCATATTCGTTCTGAAGGAAAGCAGGACTGTGCAAATTGCCTCCAATTACAGTTACATGAACCTGGGTGGAACTTCTAAAAACTCCATCAGACACTGACAGGTTAAGACTGTAAAATGGCTTCAGGGCGTGCCGGTGCAGGTTTGAGAGGGTGATAATCCCTGTTGCACTGTCAATGACAAAATGTTTATGATCATTGCCAGACAGAATGGAATACTGCAACTTGTCTATGTCTGAACTGTCTGCATCATAGGCTTTTACACAGGTCACGAAATGCCCATGAGGGGCGTGCTCGCTAATTCTGGCTTCATAAATCTGTTGTTCAAAGAGTGGTGGATTATCATTGAGGTCGGTAACGTCCACCGTGACAATCACATCACTGCTCAGCGTGGGCATACCACCATCAACTGCCCTCACAAAAATCGTGTGCTGCCGGGACTGCTCGTAATCCAGGGTTCTGAGTAGTGAGA-TGAGGCCAGTGCTGCTGTCTACATGAAAATGATCATGACTCTTGCTGTGATTCCCAAACATCTGGTATGAGATTCCTCTATTTGGTTCTGAATCAGAATCGGTGGCTCTAACTTGAACAACAGACGTTCCAATTACAGATGCCTCAGACAGGGTCACCGCATAAGACTGCTGAGCAAACACAGGAGGGTTATCATTGATGTCGTCTACTATGATGTCCACAAATACTTCAGCATGAGCGCCCGTCAAGGAGTCAGTTGCGCGTATGCTCAGCTTATATGCCGGGTGGGCCTCAAAGTCCAGAGGAGCTATGACATTGATAACTCCAGTATTGAAGTTAATAGTGAACTGGCTGAAAGGGTCTCCGTCTGTGATGCTGTAGAACACTTTCAGGCCTTCCGGGCTGTTAGCCTGCACGTGGACCACAGGGCTGTGCACCTGGATGCTCTCTGCAATCTCTGCACTGTAGAAAGGTTTTTCAAACACAGGCATGGCTTTATTCATGACAGTGATCGGAACGATAACTTCCGCTGAAAAGGCCGGGTTCCCTCCATCTTTTGCAACCACTGTAACAAGATATTCTTTATTTAAGGTGTCAAGCTCAAATTGCTTTTTCAGTGAAATTTCACCCAAGGGTCCAATTTGAAAGTGTTCATGATGTTCCTTGAGGTAGTAATGCACTTCCCCGTTTCTGCCACTGTCTCTGTCTACAGCAGTGACATAGCGAATGACATGGCCCACCTCAGTGTCCACTTTAACAACGGCGTAGTAGGGAAGGTTGACAAACACCGGCGCATTATCATTTTGGTCTTCTACAATGACCTTCACGACAACGTGGGCCACTGCAGAAGGCTTATGTTCCTCTGTCACTTCTACAACCACATCAAACGCCTCCTGCTGCTCACGATCGAAGGGCGTGCCAGTGGTTGACAGAACTCCTGAAGTGCGGCTTATTTTAAATCTGCGATCTGGGTTGAGGATGTGATAAAACAAAGGCTCATTGATTGGATTCCCAATAGCAGTAATGACAGCTAATGTTTCGGCCTCGGTGGAATTCTCTTTCACTACCGCAGAGTAGACATCCTGGGTAAACTTTAGGTGACTTTCTTTGCTTTCTTTCACATTAATTTTGACAGAGGTAAGGCCGGCAAATCTGCCATCGGAAGCTCTAACGGTTAGCTCGTAGCGGCTTCTTAACTGAGTTGTGTTTTGGACAGTGAGAGCACCAGTCTTGTAGTCCATAGAAAACTTCTCCCCGATGTTGCCTTCGGTGATGGAGTAAATCAACTGTGAGAATGCACTTGAATCAGCATCTGTAGCATTTACTGTGATGACTTTTACTCCTTTGTATGTTGGTAACAAAAGAGATGCTTCATATAATGGCTTGGCAAACACAGGGGGGCAGTCATTAATGTCAATTACATGTACTGTTACATTCGCTGCATACTCAGCAAATAAACGTGGGGTTCCCATGTCATGCACTTGGACGGTAAAGTGAAAAATACTTGTTTCTTCATAGTCCAGACTTAGTACTGTATGAATAGCACCAGTGCTAGAATCAATAGCAAAATATGTGTGTACAGATGGTTCAACAATGTGATATACAAGCAAAGCATTTGAGTCTTTATCAGCATCAGCTGCTCGAATCACCAGTGGGACATTCCTGTCTGTTAGGACCACGCTGTTAATTGAGGCTGATTCACTAATGAGTCCTGTATATTCTGCCTGCATAAAAACTGGCGCGTTGTCATTCTCATCCTGCAAGTGAACTAGAACCGTTGTATTAGTGGACAAACCAGCCATGTTAGTTCCTTGTATTATCAATGTGTAAATGGGCAAAGTTTCAAAGTCCAGGGCTTTCTGAGTGATGATAGTTCCAGAATGTGGATTAATATCAAAAGCATCACCTGTATTTCCATCTTTTATTTCATACACCACTGATGATTGACTATGGGCTGTAACCATCCCAACGAAACTCCCAATGCTGACAGTTTCACTAAGTTCAACAGAATATTCTTTTGATGTAAACTTCGGAGAGGCGTTGTCAGCAATTGTGACAAAGATACGCACAGAAGTTATTTCACTCATTGGTGGACTGCCCTTATCTGTAGCTTTTACCATTAAATCATACTCCGCTTGGTTACTTCGATCTAATTCTTTGGCAGTTTTAATAGAGCCCAAGACAGGATCAATCATAAAAGAATTTCCAATATTTCCTGGAAGGAGAGGAAAA chr4 + 94230402 63548761 63548760 63553700 63548761 63548760 63553700 4940 TGCCTACCTTTTCACATACAGGGCTATTGTCATTAGCATCAAGCACTTTAACCTCCACCACAGCTCTAGTAGCAAATGTTCCATCAGTAGCTGTAATATTTAGAAGGTAATGGTCCTTTTCTTCCCTGTCCAGGGGCTTTTTGACATAAACTTTCCATTCATTCTGAATATTCTCAACAGCAAACTGTCCCAAGAGATCACCTCCTAAAATACAGAAGTAAACTTTTAAGTAAAAACAAGAGGGAGAATGTTACTATTACTCTATCAACACTAAATTACATCtaaaaaataaaataaaataaaaatttaaatGCAAATGAGCAGCTACTTTCTCTGGCTGTATTTGAAAAAGTTTCAACTTTCACAGAAATAGCAGGTTCTGATACAATATTTAACTGTTGCAAATAGAAT-CTATAAAAATCAATGTAGAAATTCATGTAGCAGCATTATAGATAACATCATAAGACAGTGAGATAAAAAAAAGCATTAGAATACTCCACTGTAGGAAGGCAACACTATTATTTTGTGTTTCTTTGGTTCCTTTTTTAATGCCAACAGTGATTT------CAGTGTAAGTATACATTTCTTTATAAAATATGATAACTGTGAACTGAACAAAAAACTTAGGGAAGCATGTTGAGCAAAACACATGTCAAACAGGAAGCCAAGGACCCGTTTTCCAAAACTCTTTTTCCCCTTAATCATGCCCCTTGATAATTGATTT----TAAGAC---ATACACTTTCTTTCTTTGCAGCTAAATGGTTTCAAGTACGTTTAA--AAAAT------TTGAAG----GATTAAGATATAGTGCACATCAT-TCCAGGACACCTCAAATAATTTTTTCTGACATTACTCAAA---------AAGAATT------ACCTGTAATGTAGTAAGAGACTTGTCTATTGACTTCTTTTGTATCAGCATCAGTTGTACTTAAGATGGCAATTATTCCACCAGGAGGGTCATCCTCACTGACTGTTCCTTTATATATCTCTGCAGTAAAGCGTGGAGGATTGTCATTCACATCTGTAACAGTAACTTCAACCACAGCCAGAGAAGACAGCTGAATTTTTTCACCTCGATCAGCTGCAACCACTGTAATTTTGTATTTGTCTCGCATCTCATGGTCAAGTTCCTTGAGAGTGGTAATCCAGCCAGTTTCCATGTTTATGGCAAAGGACTCTATAATATCTAGTTCTTGAGAAGGATCTAGGCTGTAAGTGACCTGCCCATTAAGTCCTGAATCTAAGTCAGTTCCTTTTACTTGGATCACTCTTGTTCCAGCTGGCATGTTTTCTACAATGAATGCTTCATATGGATTGGATTCCAAAACTGGTTTGTTATCATTTGCATCTTTTACTTGAATGCTTACTTCTACTGAGGAAATAACATTATAATCTTCATTTGTATACTGTGCTAGCACTGAGAACTGGTACCATTTAGTTGTTTCATGATCAAGATTCTTCTCAAGTTTCAACTTTCCAGTCTGTCGATCAATCACAAAAAAATTATCTCTATTGCTTTCAGGAGTGTTCCCTTTAATCAGACTATACACCAAAGTCTGATTATGCTCTGCTTTGATAACATCTATCTCAGTTCCAACTGGAATGTCCTCTGAAACCATGTAAGAATAAAATGGTTCTGAAAATTTTGGAAGAGACACTTCTGGTGGGAGTATTCTAGCGTAAACGGGAACAACTGACTCTTTCTGGGGGGATCCGCCATCAACAGCTCTAACAAAAAAGGTTAGAAACTCATTTTCTAAACCAATTAAGCTTTCTTTTGTTGTAATTATACCAGACAAAGAATCAATTTCTAAATTCTCTTTAACATTTTCAGACTCGGCTTCAATAGTATATGTGATGTCTGCATTTGTACCCTCATCGGCATCAGACGCCCAGACTTTAATGACAGAAGTTCCCCGGGGAACATCAGATCCAATATTTACTTCATACTCCGTTGCTCGAAATTGTGGAGCATTATCATTGTCATCTGTAAGTATTACATTAACTGTACAGAAAGCAACTTTTCCTCCCGAATCTTTGGCCATTAAACTAATGGCAATTACTTTTTCTGCTTGTGTTTCACGGTCAAGCTTTTCAGAGGTAAAAATTTGCCCTCTCTCACTTATATAAAATCTATCTTTGGCAAAATCATTAATAATGTGGTAAGTGATATGGCCATAAGTACCAGAATCTTCATCTCTTGCTCTAACCACAGTCACTAATGTATGCAATGGAGCATTTTCAGCTAGTTCAACCTCATATTCGTTCTGGCTAAAAACAGGGCTATGCATATTGGCACTGGTTACAGTTACATGAACTTGGGCCGAGCTCCTGAAAACTCCATCAGAAACAGACACATTAAGAATATAATGTGACTTCAGTGCCTGCCTGCGTAGGTTTGAGATGGTGATTATGCCAGTTTTACTATTAATTATGAAATTCTTTTGGTCATTGCCTGTCAGAATGGAGTACTCCAGTTTGTCAGCATCTGACCTATCTGCATCTGAGGCTTGCACACACGTCACAAAATGTCCACGAGGAGCCAGTTCACTAATTTTAGCTTCATAAACCAATTGGTTAAAAAGAGGAGGGTTGTCATTTAGATCCGTCACATCAACAGTTACAACAGTGTCACTGCTCAAGGGCAGCATGCCACCATCTACGGCCCTTATTAGTAACTTGTGTTGTTGAATTTTTTCATAGTCCAAAGCTCTT-GTTGTGAGAATGAGTCCAGTACTGCTGTCTATGTGGAAGTAGTCATGACTTTCAGTATCATCCTCAACCAAATGATAGGAAATTCCCCTGTTTGTTCCAGAATCAGCATCTGTAGCGCTCACTTGTACAACAGGTGTTCCAATGACTGATGCCTCAGAAAGAGTTACAGCATAAGACTGCTCTGTGAATACTGGAGCATTGTCGTTGATGTCTTCCACTATTATGTCCACAAACACATCAGCGTGCGCTCCAGTTAGGGAGTCTGTTGCTCGGATATTCAGCTTGTAGGCTGGATGAGACTCAAAGTCAAGAGGGGCAACAACATTTATCACTCCAGTGTTGAAGTTGATCATGAACTGATTGAAAGGATCTCCATCAGTGATGCTGTAAAACACTTTAAGTCCTTCTGGGCTGTTTGCTTGTACATGTACTACAGGACTATGGAGCTGAATATTTTCTGGTATTTCTGCACTATAGAAAGGCTTTTCAAAAACAGGCATAGCTTTATTCATAACTGTAATTGGGACTATAACTTCAGCAGAAAAAGCAGGTTCTCCTCCATCTTTTGCCACTACTGTGACCAGGTACTCCTTATTTACTGTGTCCGGTTCAAATTTCTTCTTCAGAGAGATTTCACCAGAGGGATCAATCTGGAAATGTTCATGATGCTCTTTAAGATAGTAATGCACTTCTCCATTTCTGCCTGCATCTTTATCTACAGCGGTGACACGTCGAATAACATAGCCTACTTCAGAGTCTACTTTAACTGCTGCGTAATATGGAAGATTGACAAAAGATGGAGCATTATCATTTACATCTTCCACTGTGACTTTAACTACAACATGTGCAACAACTGATGGTTTATGTTCCTCTGTCACTTCTATGACCACATCAAAAGATTCTTGCTGTTCACGATCAAATGGTATTCCTGTTGTTGAAAGGACTCCTGAAGTTGGGCTTATTTTAAATCTGCTATCTGGGTTTAGAATATGATAAAACAAAGGCTCATTTATTTGATTCCCTATAGCAGTAACCACAGCTATTGTTTTTGCCTCAGTGGAATTCTCCTGCACTACTGCAGAGTAAGAACTCTGTGTAAATTTCAGCTGGCTTACTTTGCTTTCTTTCACATTAATTTTTACAGATGCAGTGCTTGCAAATCTGCCATCAGATGCTCTCACTGTTAATTCATATCTGCTTCGTAACTGAGTTGTATTTTGTACTGTTATATCTCCAGTCTTGGGATTTATTGTAAATTTTTCTCCAATGTTGCCTTCGATAATGGAATAAATCAGTTGTGAAAAAATGCCCGAATCAGCATCAGTGGCATTTACGCTGATGACTTTCACACCTTTATAGGTTGGAACCAAAATAGATGTGTCATACAGCTCTCTTGAAAACACAGGAGGACAATCATTGATGTCAACTACATAAATAGTAACATTAGCTGCATATTCCGCATATAAACGAGGAATGCCCATATCATGCACTTGTACAGAAAAGTGGAAAATATTTGTCTCCTCATAGTCCAGACTCATTAATGTCCGAATGGCACCAGTGCTAGAATCAATGGCAAAATACTTGCGAACAGATGGTTCAACAATTTGATAAACAAGCAAAGCATTTGATTCTTTATCAGCATCTGTAGCTTGAATTACTAATGGGACATTCTTGTCAGTCAGAACCACACTGTTAACTGAAGCTGATTCACTGATGAGTCCTGTATATTCAGACTGCATAAAAATTGGTATATTGTCATTCTCATCCTGAAGATGTACCAAAACTGTTGCATTAGTGGACAAGCCAGCCATGTTTGTTCCCTGCACAGTTAGCGTGTAAACAGGCAAAGTTTCAAAATCAAGCACCTTCTGCGAAACAATGACACCTGAGTTCGGGTTGATAGCGAAGACATCTCCTATATTACCATCTTTTATTTCATAAACTACAGAAGAGAGACTGTATGCTGTAACCATTCCAACAAAACTGCCAATGCTAGCACTTTCGCTGATTTCTGTAGAATATTCTTTGGCTGTAAATTTTGGTGAGGCATTATCAGAAACTGTAACAAATATATGCACAGAAGTCACTTCATTCATTGGAGGATCTCCTTTGTCTGTAGCTTTTACCATCAAGTTGTACTCTTCCTGGTTACTATGATCTAATTCCTTTGCAATTTTAATCATACCCAAGATGGGATCTATCATGAAGGAATTTCCAATATTCCCTGTGAAGAAAAATAAA 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207M18I11M3I8M18I39M41I8M3I29M4I9M5I8M1D18M5I24M4I6M9I30M38I19M6D23M3I45M7I14M13I32M8I12M4D6M3D20M6I19M2D5M6D6M4D23M1D26M2I12M9D7M6D1846M1D9M1I2231M 3555/4752 74.8% 4940/94230402 0.0% 231/4752 4.9% 123068237 67146318 +26514 chr4 + 190214555 186628094 186628093 186628770 677 AGTAGAAACAGACTTTTAACAACTGCAAATTTAAAATGCCACTGAAGGCTCCAAAA-------GTACCTGACTCGATCGAGTACAGCACTTCAGCATTTTTCCCTTTGTCCTTGTCCAGAGCCGTCACCTGCAACACAACTGAGCCAACGGCTGCCGATTCATAAACCCGCCCTTTGTAGGAGGAAGCGGTGAACCACGGGGCGTGGTCATTCGTGTCGCTGACATTGACCACAATCCTTGCAAAGTTGCGTTTTACAGGCACATCTTGATCTCGTACCTAAAAAGAATTGACACATTATCAATC----CCATTGGTGCTTT--------------CCTTA-TAACTAATTAAAAATCACGCTCGAACACACAAAGGCCTCA---GGACCAAATGG------------------TGGGAGGAGAG-------------CGGGTAGAGC------------------------------GCCTACCATGACCGTGAGGGTGTGCTGGTGAACAGCTTCATGATCCAGTTTCTCAGAAGTATAGAGAGAGCCGGTTGCAGGATCAAGACGAAATTTCTTGAGACTCAGTGGATCTCTACTGCTCTGCAGAGTGTAGATTAGTTTGTTTTTCTCATCCTGATCCACAGCACTGATTTGCAAAATTTCTGTTTCTGGCGCTGTATCTTCAGGAATAACAACTTCATACTTTGATGTAGAAAACTGAGGACGATGGTCATTTGTGTCTATTACTTTGATGAATACCTGTAAT chr4 + 94230402 63556794 63556793 63557559 63556794 63556793 63557559 766 AGTTGAAACAAAGCACGACCAAGTATCATTTTAAAAACAAACTGAAGATATAAGAACGTCAACATACCTGATTCAATAGAATATACAATTTCTGCATTTTTTCCTTTGTCCTTATCTAATGCTGTAACCTGGAGGACTGCCGATCCAACAGCTGCTGACTCATACACACGGCCTTCATAGGAAGAGCTGGTGAACCATGGTGCATGGTCATTTGTGTCGCTGACGTTAATGATGACCCTAGCGTAGTTGCGTTTTACAGGAACGTCTTGATCTCGAACCTAAAAC-AATTAGCATAATACTAGTAATTATCACTGATAATTCAGAAGTTCACCAAACATTACTAATTATTTGAGGTTCACCCTTTACCAGTCAAAGACTGAATACAAATTAAATGTACAAATAAATGTTTGCATTAGGGGGAAAAATAAAAGATTTTTCAAGAAGTGCTTATTATAGAATACAGTACACATTGTGCTTATTTACCATTACTGTGAGAATATGCTGGTTCATGGTCTCATGATCTAGTTTTTCTGTGGTATAAAGAGATCCAGTTCCAGGGTCCAGACGAAATTTTTTAAGGCTGATGGGATCAGTGCTGCCTTGCATTGTATATATCAGTTTATTCTTCTCATCTCTGTCTGTGGCACTAACTTGCAAAATTTCTGTCTCTGGTACGGTGTCTTCAGGTATAACAACTTCGTATTTTGAAGCAGAAAATTGAGGCCTGTGATTATTTGTGTCTATAACTTTGATGTACACCTGAAAT ...x......:.x:x:x.x...x.::x.x.......xxxx.......::x:x.:..-------:.......:..:..x..:..:.xx.:...x........:...........:..:.:x..:..x.....x.:x..x:.:..x.....:.....:..:.....x..x..x....::.....:..:x:.........:..x..:........:...........:..:.:x.::.:...x..:x................x..:...........x........x-....::..:.x..::.:.x----:..:..:.:x..:--------------.x...-...:..x..:.::x....x..:x.x..xx.....:.:xx.---::.::.....x------------------.:..:...:.:-------------.::.x..x..------------------------------:::......x..:.....::.:.......xx.::.::........:.....:..x.x:.....:.....x..:...x....:..x...........:..:..:..x.xx.....xx.:....::....xx..:..x..:.....:..:........::x:..::::.....:.:...............:.....::.x..:........x...........:..:.....x.:......:.....x.x:..:.:............x.........x.:.....x... 56M7I222M1D19M4I13M14I5M1I40M3I11M18I11M13I10M30I289M 482/676 71.3% 766/94230402 0.0% 91/676 13.5% 123071300 67143255 +11660 chr4 + 190214555 186633646 186633645 186633886 241 TCCTCCTCTGACAAGTGTGTCATTAGTAATTCACTTACCTGAGTGAGGATAGTGGTGGTTCCATCTGTAGCCTCGACTGTGAGGTTGTAGTTTGACTTCTGTTCTGCATCAAGAGGTTTGGCAACAATGATGGTTCCAGTTCCCTTGTCCACATCGAAGTGACTGTCGTAGTTGCCACCTAATTTGGGGAAAAAAAAGTAAAAACAGGTCACAGGA-----TAACACTCTGTAGTTTATTCTGTGG chr4 + 94230402 63564749 63564748 63564994 63564749 63564748 63564994 246 TCCTCCTTCTATTAACACTTCTTTAGAAAGTCCGTTACCTGAGTGCTGATAGATCTGGTTCCATCTGTTGCCTCCACTGTCAAGTTGTAATTTGATTTCTGTTCTGCATCAAGAGGTCTAGCAACAATGATAGTTCCAGTACCCTTGTCCACGTCAAATCGACTGTCATAGTTGCCACCTTGTTCAGGAAATTAGGAGAGGGAGAGGTTCATAAAACACAGTATCATTCTACTGTTTCATGTATGG .......::x.:x.::::x..x....x..x..xx...........xx.....xxx.............x.....x.....x.:......:.....:.....................:.:...........:........x...........:..:..x:.......:............x:..::..:..xx.::..x:::.:x:.x...:.::.-----..x..:...::x....xx.x.:... 216M5I25M 177/241 73.4% 246/94230402 0.0% 5/241 2.1% 123068897 67145658 +12935 chr4 + 190214555 186634681 186634680 186634876 196 GCTTTTATTTTAGATCTCATAATCTGA-GGCAAATTATGTGATCTCAGCAGATACCTTCTGCTGTACAGGTCGGGTCACAAGTCATCTGAAAGATGTAAAAAACTTCTCTAGCAAGCGTGTCTCCTGGCACAGCCAAAAAGAAGCAAGCGCGCATGGAAAGCAAGCACAGAATA------AAAGCAATCAATCAAACCAGGTC chr4 + 94230402 63566805 63566804 63567004 63566805 63566804 63567004 200 GCTTTCATTTCAGATCTCATAATCTGGTAATAAATTATGTGATCTCAGCAGATACCTTCTGCTGTACAGTTCAGGTCACAAGCCATCTGAAAGATGTAAAATACTTCACTAGCAAGCTTGTCTCCTGGCTCAGCCAAAAAGAAAGAAA---GCATGGAAAGCAAGCAAAGAACACAAAGGAAAGCTGTCAATCAAATTAATTC .....:....:...............:-:::......................................x..:.........:..................x.....x.........x...........x.............:x..:---................x....:.------.....x:.........::.:x.. 27M1I120M3D23M6I23M 169/193 87.6% 200/94230402 0.0% 10/193 5.2% 123067876 67146679 +31751 chr4 + 190214555 186636014 186636013 186636944 931 GGAATGCTTACCAGTGATGTCAAACCAAAGGGGTATGCCAGGAGGCTCCACAGATATTACTCCAATCATGTGAGCAACGGGGTCACTTTCCATCACAGTAAAGGTAAAAAATGATTCTTCAAATGAAATGGGCTCCAGGGACGGTTTGGGCTTGGAGATCCATTCAATATGGAGTCTGGTGGTTGATGACTTTTGAGGGCGACCATTGTCAACTGCCTTAATCT-----------ACAACATTTGGGCAGAGGGGATTAAAAACAGCAAATCAGGAGTTACAACCCAGAAATG----------AATGAAGCACAGACTGGTTTGGTCTT-----------------AAACTGAGCCAATTTCAAA----CATTTCACATTTGTATTCTGTG------------------TATGGAATGCCTGACAGAAGAACAA----------TGATTTCATGACCAC---------------------ATTCAACATAAACAATAA-GCACCCTGATTCTCAAACGTTATCCGGCATTGCCTAATGGGGCCAGCAGGTCACAAACACTTCAGCCGTTTACAAAATAGAAATA----AAGTTAC----TAAAGAAAAAA--------TACAAAATAAGGTTTATAG------------------------------------TCACA---------------------------------ACATATGAAAAATTACAGTAC------------TACAA--TCTTAACTCACTGAAAGAATATCATATTCTCCAGCTGCTGAAAACCTCTTGGACGAAACCACTCCAGTTTTCGGTTCGATGAAAAATTTGCCATGCTCATTCCCGTCTTCGATGCTGTAGGAGATTTCTGCATTGGGGCCCTCATCCTTGTCGGTGGCTATGACGTGATAGAGCGGCTCCCGTCTGGCATTTCTTTCTCGGTCTGGCTTTTCCCGCTCAGGGAGTCTGATTTTGTAGAACTTTTGCAGAAACTGAGGTTTGTTGTCATTTTCATCAAGGATTTTCACAATGACTCTTGCAATGGTTGATTTGGGGGGACTACCATTGTCTGTCACAGTAACCTGTTTTTTT-----AAAGTTAACAGATTAACATG chr4 + 94230402 63568649 63568648 63569758 63568649 63568648 63569758 1110 GGCATCCTTACCCGTTATGTCAAACCAAAGTGGTATTCCAAGAGGTTCAACAGCTATTACACCAATCATGTGAGCAACTGGGTCACTTTCCATCACCGTAAAAGAAAAAAATTCTTCCTCAAAATAAATGGGTTCTGTGGGTGGGATGGGCTTTGGAATCCATTCTATGTGAAGCCGTGTAGTTGATGATTTTTGTGGTCGACCATTATCTACAGCTTTAATCTGTGAAACAAACACACCTTTTAGGC-TACAGGATCACA-----TAAATCA----TTATGACACATAAATGGAAAAGTAATAATAAGCTCCAGACATGTTTGTTTTTGTGAGATATATCCCAAAAGGCTAAGTGTCTCTCAAAGTGCTACTTGCCCCTCATTATCTGGGGAGCAAAAGGACAAAAAGCATGTAGCACCTGATAATAGCATAAAACACTACCATAAATTCACTTCTACTTTGCTTTCTTCCTGAAAGAGATTCAGTATGATTAGTTATGCTCCCTCAGTCT-ATTCATTATCTGTCAAGTTCTG--GAAAACAGCAG----CAGCTTCTTGATTCTCTTTCTCAATACAAACATCTGAAATCATCCTTTAAAAAAGAAAACAACCCATAAAAAACAATACTTCTGGATCTGTTGATTCTTTCTTCCTTCAGATACTGCAGTCTCTCATCTGCCAGCTATTGAACAAAAAGAGATGGAAATACAGATAAAAGAACACTTCACATATTCATGATATACAAGATTTTGACTCACTGAAAGAATATCATATTCCCTTGCTGCAGAAAATTTCTTTGATGAAACCACTCCAGTTTTCGGTTCAATAAAGAATTTGCCATGTTCATCTCCATCTTCAATGCTATAAGAGATCTCTGCATTGGGGCCTTCATCCTTATCTGCAGCAATAACTCGGTAGATCGGCTCTCTCCTAGCAGTCCTCTCTCGTTCTGGCTTACCGCGCTCAGGGAGTCTGATTTTGTAGAACTTTTGCAAGAACTGAGGCTTATTGTCATTCTCATCTAAAACCTTTACAATCACCCGTGCAACTGTTGATTGGGCAGGAATACCGTTGTCCGTTACTGTTACCTAGttttatttaaaaaaataaataaataaaaatG ..x..x......x..x..............x.....x...:....:..x....x......x.................x.................x.....:.x.......xx...:.....xx.......:..::x..::..xx.......x.::........x..:..:..:.xx..:........:.....x..x........:..x..x..:.......-----------...x.x...:...-x.x:....:.x.-----:......----...::..x..x.....----------...:.:x:x.....xx.....x.:..-----------------.::..:..:xxx.:.....----:.:..xx.x:.::.xx....x.------------------:...x.:::.....:.:x..x.:..----------.:.x....:xx.:..---------------------.....::..:.x:.:.x.-..x....x.x...-.xx.:.....:.x..xxx:..:--.:::x......----..:x:x...x.x:.x:..x.xx....x...:.----..:.:.:----....:..:...--------..x....:..x::..x.:.------------------------------------..x..---------------------------------...x..:...:.x:..xx:..------------.....--.:..:........................:.:x.....x.....::....x..:.......................:..:..:...........:....::..:.....:.....:..:.....:..............:........:..x.::..x..:..x:.:....x......:.x:..:...x.:..:.....x........x:.x..................................::........:..:........:.....x.::.::..:.....x..:.x.....:x.......x..x:...x....:.....:..:..x..x....:x....x.-----...:.x..:.:..x..x... 224M11I13M1D12M5D7M4D16M10I26M17I19M4I22M18I25M10I15M21I18M1I13M1D22M2D11M4D32M4I7M4I11M8I19M36I5M33I21M12I5M2I351M5I20M 676/914 74.0% 1110/94230402 0.0% 213/914 23.3% 123067365 67147190 +3338 chr4 + 190214555 186639994 186639993 186640088 95 CATGGTGGCGCGTGACTGTAATCCCAGCTAATTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGAG-ATCACACCAA chr4 + 94230402 76033197 76033196 76033290 76033197 76033196 76033290 94 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAA ..::....:..::.--....:.:.......x...::........x.xx.x...x::........::.:..x.xx:..:..:...:-..x.::.... 14M2D69M1I10M 63/93 67.7% 94/94230402 0.0% 3/93 3.2% 110606797 79607758 +3474 chr4 + 190214555 186645815 186645814 186645888 74 GTGCACCTGTAATCCCAGCTACTTGGGAGGCTAAGGCATGAGACTCACTTGGACCTGGGAAGCCGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x....:.:...........::.....:..x.x..x..xx......:...::.:.:x::x:..:..:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 110612611 79601944 +3098 chr4 + 190214555 186645948 186645947 186645995 48 AAAAAAAAAAAAAAAATATATACACACACACACACACACACACACACA chr4 + 94230402 67195530 67195529 67195577 67195530 67195529 67195577 48 AGAAGGAAAAGAAAGGTATATACACACACACACACACATATATATATA .:..::....:...::......................:.:.:.:.:. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 119450418 70764137 +3245 chr4 + 190214555 186645950 186645949 186646003 54 AAAAAAAAAAAAAATATATACACACACACACACACACACACACACACACACACA chr4 + 94230402 55729493 55729492 55729546 55729493 55729492 55729546 54 AAAAAAAAAAAAGATAGATACACACAATTAAACACGCACATGCAGGCACACACA ............:...x.........xx:.x....:....::..x:........ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 130916457 59298098 +5234 chr4 + 190214555 186652616 186652615 186652898 283 AAAGACTGCAAATAGGTAA------------TTTTTTTTTAAA--TGAATTCCTGCCATTGAAATGCGACTGGCCCGTCCTTTCCTTCCTTTGCAGCTATCAAATGTTACCGGAAACCCCTGGAAGTTGTTTGCAGCTTTAGCTATTTCCTATTGCAGTTTGTTCAGTATTCGTTCCAGCCACAATAAAATGCCATTTACTCTGGTTCAGAA----AAAAATAGTTGTAAA----GTGTTACTGGACTA-ACACATGATGAGCACCCAG-TAT-ACCTACCAGCTATTCTACCATTTTGTAACTTTAC chr4 + 94230402 63585030 63585029 63585327 63585030 63585029 63585327 298 AAAAACCGCACATAATTAAACAACAAAGATGTCCTTTGTTAAAATTAAGCCCATGCTATTGTATGCTCACTGCCCCTTCACTTCCTCACTAAGTCATTCTCCAGCACTATCGGAAGCCCATGGAAGTTGTATGCAGCTGTACCCATTTCCTATTTCA----CTTCAGTCTCCAAATCAGCCACACACACAAGAAAGATACT---GCTCTGAAGGCTACAAACAG-TGTAAAATTGATATAACTGAGCGAGGCAGATGATTTGCTCCAAGATATGATCCAAGAGCTA--CTAACATTTTATAAATTCAC ...:..:...x...:x...------------.::...x.....--.:.:::.x...:....x.xxx:x....x...x..x:.....:x..xx.:x::.x..x.::::..:.....:...x..........x.......x..x.:..........x..----x......x.:.:xx:........xxx.x.x.xx.xx....---.:..x...----.x...:..-......----:.:.x....::.x.-:..x.....xx..x..x..-...-.:.:.xx.....--...x......:...x..:.. 19M12I12M2I112M4D40M3D8M4I8M1D6M4I14M1I19M1I3M1I12M2D20M 187/273 68.5% 298/94230402 0.0% 35/273 12.8% 123067586 67146969 +19651 chr4 + 190214555 186663293 186663292 186663631 339 ACATACCTGTTTTAGGATGTATTGAAAAGAATCCTTGTGGATTTCCACTTGTAATTTTGTACATGAGCTTGTCATTAGAGCTCGAATCTGGATCAAATGCCTCGATCTGGACCACAGATACATCTTTAGGAGAATTTTCCATGATTTCTGGGTAATAAACAGGCTCTGATGTCTGTGGTGCATTGTCATTGACATCCTCAACCTCTATGTAGATCTCTATGAACGATGAAAGAGGCACGACACCCTGATCGGTTGCAAAGACTGTTAGCCAATAATGGGAGGTCGATTCACGGTCCAGTCGATCTGACGTCTCTATGACACCTA------CAGAGAAAAAAGAAA chr4 + 94230402 63589981 63589980 63590325 63589981 63589980 63590325 345 ACTTACCAGTTTTGGGGTTTATTGAAAAGAATCCCTGTGGATTTCCACTTGTGATCTTGTATGTTAATTTTTCACTTGAGCTAGAATCTGGATCAAATGCCTCAATTTGAATGACGGATACATCCTTAGGTGAGTTTTCCATGACCTCTGGGTAATAAACTGGTTCTGTAGTCTGAGGAGCATTATCGTTAACATCCCCAACTTCTATGTAGATTTCAATGAAAGATGATAATGGCACAACACCTTGGTCTGTTGCATAAACAGTCAACCAGTAATGTGAAGTAGTCTCACGATCCAGGTGATCAGCAGTCTCAATAATGCCTGTTTAACCGGAGGAGAAAGAAA ..x....x.....:..:.x...............:.................:..:.....::.x.::..x...:.x.....x....................:..:..:.:x..:........:.....x..:..........::..............x..:....xx.....x..x.....:..:..:......:....:...........:..x.....x.....x.:x.....:.....:..:..x......x.:..x..:.:...:.....x..:..x.x:.....:.....x:....x.xx.....x..:.::...:------.:...:.:....... 324M6I15M 265/339 78.2% 345/94230402 0.0% 6/339 1.8% 123073312 67141243 +6428 chr4 + 190214555 186676445 186676444 186676772 328 TTAATCTGAAGCATATAAGGAGAACTTAAGGAATTTCAGAAATGTAAAAGCAACCTTTAAAAGTTAAGAGTGACTTACAGGTTTTCATAGGCTGAATAACAACTGCC-TAAAGCTCTTGTACTGCAAAGTGTGTTCCAGCAAGAAGACAAGGCACTATTCAATGATTAAAATGTCAGTTGAAATGACTAAG-----CCTCATGCCAAACTCCTTAAAGCACTCCCTTGCTAAAGAAGGAATGGAATGAGATTCCTCCTGTTACAGTCAAGCACTACATTGGTCTCTGTATAAACAGAACTCTCTCCAAAGAGACAGTTGTCTCTGGAGTCCTAG chr4 + 94230402 63597038 63597037 63597348 63597038 63597037 63597348 311 TTGATCAGA--CAAATAATAATCACTTAACAAAGCCAAAACAAACAAAGGCATC------------ACAATAAAACATTGGTCTTTATACCACATAAATCAAATGCCCTGAAGCACTGAAGATTTCACGTATGCCCTGTCACAGAGACAAGGAACTAGTCAGCACTTAAAATGTCAGTTGAAAAGACCAAAATCTCCATCCTGTGAA----CTTGAAACAATCTCTTTCTTTAGAAGGAATGGAATGAGATTCCTTTTGCCGAAGCGAAATGTCAGCTCGTCCACTGTATAAACAAGGCAGCATGCCAGGAGA-----GGCTCTGCACTCCGAG ..:...x..--..x....x:.xx......x:..x::x.:.x.x::...:...x.------------.x.:.:.xx:.:x...:..:...xxx::x.x.x...x....-.:....x..x:x:x.x:x.x..:..::.::x..x::........x....x...:::x..................x...:..:-----.x..x..:x..----...:..:..x..:...x..xx.......................::..:::x..:x..:::::.xx.:.x:.x...........:::.xx:x.x.x.:....-----.x.....x.x...x.. 9M2D43M12D41M1I83M5I11M4D102M5D16M 193/305 63.3% 311/94230402 0.0% 29/305 9.5% 123079407 67135148 +6928 chr4 + 190214555 186684601 186684600 186685194 594 CTAAAGCAACTAACATTCCTCTCACAAGTGAATGACTGGATGTTAATCACTAACTTGGGGGATAAGAGGGAAAAAAAAAAAAACCCAAACTCCCTTTACCCCACCAGTATTAACGCAGCACAGTGAAACAC-TTTCAGACACGTAATACA---AACAGGGTAACAATTGTTTTAATTTAACAAATTTAAACAAAAACGGTCACCTCTGGATAGGGCGTAACATATTAAACAGAGGAGGCGTGGTTTTCATTTGCTACTCTGTTTAGTTTTGACTAACTGGAAATGCTCATCTCTTCTTATTTCGGCAACTCCTTTTATGCCACAACCAAGTCATGAATTCAGGAAGGAAGCAGGCAAGTCTGATTTGTGCATGAAACATTATCTAAAGGGAAGAAAGTCAGCCAGTGCCCTCGCTAATCCCTTGGGCAAGAAAGGTAAAGTATACAGCCACAGTCTCAAAGCCAGA-GTGACACAGGAGTAACCAGGAGCGCACATTCCTGCCTTATCTGGCGTTACTTTGATTCACCTCACCTTTCTTTCATGACAGGAAGGGCACTCCAAGGGCATTACACTGAGATCAAACAAAGCATTCCAGAAA chr4 + 94230402 63604006 63604005 63604539 63604006 63604005 63604539 534 CCAAAGTAATTAACATTCCTTGCACAGGCAGCTGGACATTTGTTAATCATTAACTGTTTGAGTAAAAAGGATCGGGGGAGAAACT---GTTAGCTGTTCTTCACAATGCTACACACA-TGCAAAAAAATACCTTTAAGACAGAGGATTTAGTGAACAGGGTGACA--TTATTTACAGTAACAA---TGAAC-----CTGCCGTATTATCATAGGGTGTTCAATATTTTGCTAACAA--TAATATCTGTCTTTGTGACACTTTCCAGGTTTAA--AGCTGAGTA------------ATTAGCTCAGGAATTGAATCAAT-TAAAAAACAGTTCTTTAACTAAAATAGAACAAAAAAAGGTAT-------------------ATTTAAAAGTAAGAA-------CTATGCT---GTTAATCTCTGAAGCAGTCAA----ATACATACGGCCAGAACTGTAACACCAAATATAATAGATGCAAAACCAAT-GAACACATTCCAATCTTATCTAGAATCACTTTGATTCACTCTACCTTGCTTTCATTACAGGAAGGGCACAGCAAGGGCATTCCTCTCAGATCAAACAGAAAATTCCATAGA .:....:..:..........:x....:.:::x..:x::xx.........:.....xxxx.::...:.:...xx:::::.:....:---::.xx..x.x.::...x.xxx.xx..:..-::..:x:...:..-...x.....x:x:..x:.---........:...--.xx....xxx......---.:...-----.x.:.::x.:xxx......:..xxx.....xx:.x:.x:.--::xx:.:.x:x....:x..x..x.::..x...:.--.:...::x.------------x...x:..:.x..:.xxx.:x..-:x.x..x..:x..x.x..:.x.::x..:.x:x.::x.:..x.-------------------..:....:.x.....-------.x:...:---.:.....:..x::...:xx..----.x::....:....x.:::x:..x:...:.-:.:.:.x.x.x:x.....:x-.x:........x::.......:.x:.:............:::.....x.......x.............xx..........x.x..x..........:.:x......x.:. 85M3D29M1D13M1I18M3I12M2D16M3D5M5D40M2D34M2D9M12D23M1D42M19D15M7D7M3D21M4D29M1I20M1D111M 325/529 61.4% 534/94230402 0.0% 70/529 13.2% 123080595 67133960 +21374 chr4 + 190214555 186688075 186688074 186688757 683 TTCGCTAATTCTGTCCAAATGCTATGGAGACTCAAAGCTGAAAAAAAAAAAAAAAAAAAGCCAACACTATGTAATCATTTCCAAATTCCCTTTTCATGACCTTAAATGGGACTTCTAAAGCTAAGCAGATGCCCCAGCAGGAAATAAATTTGCAACTCAACAGAGGCACCCACAGAGATATGGCAAGATGCACCTTCGGTGGCTTT-GGCAATAATTTCCTTTCATTATGTGTGAAGGAATCTTCACTCTCCAGTGCTTCTCAAGTCAAAGAGAAGCCTGTAGAAGTTAATAGGTCCTTAATATGTA-TCTGCTCCCTGAACTGATTCCTGTTCATAAGGTAATCGC--GGACCCCATGTGGTCCTTTCACAGGGGCTTCGGCAAATCCCCTGCAGTGAGATGGCCCCTGGGCAGCTCTGTTTTCTGCAGACCAGGCTGTGACCTAATCAATAGGGTTCCAAGCAAGACAATCCCT-ACATTCAACAGCTCGGAAGAAATGAAGGGGGACGCAATTCAAGCTTTATTGACGAATTCCATTTACCTGTCACAATGATGGTTCACCCAGCAAGAGTACCCCCCCCGCCCCCCCCCAAAAAAACACACACCCTTC--AGCTGCTACAGTAGACTTTCCAGCCAGCAGCCGGCACAAAATAAACATATTTACTTAAGCTTCAGTCACAACTCTT chr4 + 94230402 63605853 63605852 63606473 63605853 63605852 63606473 621 TTTGTTAAATATGTCCAAATGCTGT--ATGATGAAAGTTTAAAATCTTCAAAGAAAAGAATAAACATTATGTAATCATTTTCAAGCTCCTCACTTTTGACCTTAATATGTACTTCAAAAGCTAAGCAGATGCTT-AGTAGGAAATAAATCCCCAACTCAACAGATGTACCAACAGTGATATGGCAAGACGCACCTTCCATAGCTTTTGGCAACCCTACACTTTTATTAT-----------TCCTCTCTCACAAGTGCTTTTCAAGTCAAAGAGAAGCCTGAACAAGTTAATAGGCCCTTAATATGTACTCTGCTGCCTGAACTGATTGCTGCTTATAAGGCAATCTCTAAGACCACATGTG----TCTCA-----GCCTGGGCTCATCTCCTACAGAGAGGCAGCCCCTAGGCAGCTCTGCTTTCATCAAACCGAATTGTAGCCCACTCAACACCTTTCACAGCAAAACAATCCTTCACTTTCAGCA-----GGAGAAGAGGATGGGATTGT-ATGGAATCTCTGGTCAC---------------TCCGAGGTAATGCTTTGCTCAGCAGGA----------------TACCTAAGAAAA--------CTTCGAAACTGCTTTGGAGGATCCCCCAGCCACTGCAAAACACACCATGAATATGTTTGTCTAAAACTAATTC-CGATTCTT ..:.:...x.x............:.--.x:x.x....:.x....xxxxx...:....:.::x....:.............:...::...::x:.:x.........xxx.x.....x................::-..:...........::x............x.:...x....x............:........x:.:.....-.....:xx.x:x....:.....-----------..:..x...x.x.......:....................x.x...........:............-......x............x...:.:......:....x.--:....x......----.:...-----..:.x...xx...:...:...x...:::......:..........:....xx..:...::::...::..:.x....:.xxx...xx.....:.......:.-..x....:..-----.:....:x.:.x...:x:.:-..xx..x..:.:x.x..---------------x:.:x::.:...x..::.:.....:..----------------:x..:..:....--------....--.:.....x::.x:..::::.......x::xxx::....xx..:..:..:...:::...:x:.x.x..-.:.:.... 25M2D107M1D71M1I22M11D67M1I39M2I12M4D5M5D101M1I10M5D20M1D17M15D27M16D12M8D4M2I67M1D8M 442/614 72.0% 621/94230402 0.0% 76/614 12.4% 123082222 67132333 +3375 chr4 + 190214555 186696888 186696887 186696965 78 GTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTCAACTTGGAGG-TGCAGGCTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .........:--....:.:...........::........x.xx.x...x.....x...:::..:.-.x::.....:.. 10M2D54M1I12M 57/76 75.0% 77/94230402 0.0% 3/76 3.9% 110663687 79550868 +187712 chr4 + 190214555 186706559 186706558 186709959 3401 TTACCTGTCTCTTCACCTATTTTGAAAACACCAACGCCAGAGCCATCTCTAATGGAGTATCGGATCTCCCCATCTCTTCTGGCGTCCTCATCATGAGCCGACACCGTCATTACCAATGAACCAACAGGTGCATCTTCTTTCACTGTCCCCTTTTCCACAAAGCTGGAAAACACGGGTGGGTGCAGGTTCTCATTCACATCAACCACCTCAACTTCAACATAGCAAGTAGAAGACAGAGAAACTGGCTTTCCCTTGTCTTTGGCCCTCACAGTGAGATTATACACTTGCTTCTTCTCAAAGTCCAACTGCTGGACGATCCTAACTGCTCCACTGAGTTTATCCACATCGAAGTTTCCTTCTCCGTGGTCCAGAAGGCTGTATCTCACCTGACCAGACTGACCTAAATCAGGATCGTGGGCTTCTAACCACATGATGACGGTTCCTTCTGGAAGATCCTCTCGGACTTTCACACGATAATTAGGTGGAATAAATGTAGGTGGGTTGTCATTAACATCTTCTAGTGATACTTTCACAACGACAGTGGAGAACAGCTGAGGCTCTTCTCTGGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATGCTGCAGCTCTCGATCCAGAGGGCGTGCGATGTTAACAACACCCGTCACGCTGTCAATTGAAAATGTGTCTGTGTCTGTAACAATTGAGTACGTCACGTGTCCGTTGGGCCCCAGGTCTTTATCTGTGGCTTCAACCTGGATGATTTCACTATGTACCTCCTTGTCTTCACTCACTTCCACAAAATAGCTCTCCTGTAAAAACTCGGGTGGATTATCATTGGCATCGACAACCACGACATGTAGAAGACGCCACGCAGCCTTCTGGGGTATCCCAAGGTCATAGACGGTAATATTCAGGGTGTATTTGTCTGTTGTTTCACGGTCAAGAGGAGATAAAATTTTCAGCATTCCTGTTTCCATATCAATCATGAAGCAACTATCCTCATTTCCTCCAGAAACAGCATAGACCAGTTTTCCATTGAAGCCAGTGTCAAGGTCAGTGGAGTTCATGAAAATTACACTGGAACCCACAGGCTGGTTTTCCTTTACCTGAATACCAGTCGGAAGAGTGCTTCTAAACTGCGGTATGTGAGCATTGACAGAGTGAGAATCGAAGAAAATATCCTCCACCTCTCCCTGGTTGTGTAATTTATTTGCCTGCAGGAGCTTCTCTGCCAGCATTTTGGCAACACCAGTCTCTTCACACTGCAAGTTTACCAGCTTGTGACTGGCAGCCACTGTTATGTTGATATATAATGGTGTGGCAAAATTTTCTCCATCTGTAGCTGTGATTCTCAGACTGTGGAAAGACACCTTTGCACCTAAGCCATCCATTAGCGATCGCTTTAATGACAATACCCCCGAGTTGGGGTTTAAACTAAAGAAATCCAGTTCATTTCCAGCTTCAATCTGATACTGTACCAACTGAAGTTCATCTGCATCAATAGCAGAAACAGTGGTTATTTGCTCTCCCACGCCTAGATCTCTGGGAATTGTCCCTTCACAATTTATTTTCTCAAACAAAGGTGTGTTGTCATTCAAGTTATTGAGAGTAATTGTAGCAAGGACTTCGACTTCCCGGCGGTACGGCAAGCCCCAGTCTGATGCACGAATCCTCAGAGTATAAACCCGAGGCATCAGTTCGTAGTCCAGGTTTTCTGACGTACTCACGGCACCAGTGAAATGGTCAATCGCAAACGGCACATGATTTAAATTTGCGATACTGTATGTCACGTACCCGTTCTCACCCTCATCAGGGTCTACGGCACTCAGGCTCATGACAGTAGTACCAATGGGCACGTTCTCATCAAAAGCAGCTTTGTACGCTGTCTGGGTAAATTCAGGGGGATTGCTATTTGCACCTAAGACTTTCACCAAGACCTTGGTGGACGCTTTTCTGTCACTTGTTGTTACTTCAAGTTCAAAATGGGCTGCCTGCTGTCTTTTAACTGGTTCTAAAATAGAAATGAGACCAGTGTTGTAATTTAAACTGAATTTAGCTTTTCCAGGTGTACTTTTAAAAACATACCTCAAATGGGAATAAGCAGGAATGGCCTTTACCATGACCACAGGTGTGTTGGGAGGAGCAAATTCACTTATTTCTGCTCTGTAAACATCCTTTTCAAACTTGACTGGCCCGGCTTTGAACTGTGGAGAAGTCACGTGAATGACTTTAACAGAAGAGAACTGGGGCGGAGTTCCTTTATCTTTAGCCTGTAGTGTGAGATTGTAGCCGAAAGGATGACTGTCCCAATCAATGCCACCGATGGCTTTGACTTTATACTCCTTACTCCCTGGAAAGGACCTCACTGTTCTAAACTGCTGGAGAAGGTCACCTGCCACGATGCTTAAAGATGCTATGTCACCATTGGCACCCTGATCGCAGTCATCCACTGTCACAATTGCATATGCTGGGTCCCTGTCCAGTTCTGATGGTGACAATGTCACTGCTGTTATCACCGGAGCACATTCATTGGCCTGTTCGATGTGCACCGTTAGCTTGGCCATGCTGCTGATGCCACTGCTCCCATACAACTTCATGCCACGGTCCGCAGCGAGGATTTCCATCTCATAGAGCTTGGTCTCTAGGTAATCAAGTCTACCAGTTAACACTATCACACCACTGGTTGGGTGAATAGCAAACATATCTGTTCGATCTTTAAAACTGTAGTAAAATTCCCCGTTGGTTCCTATGTCTGCATCCGTGGCGCTGACTCTTGCGATACTGGTCCTTATAGCTGTGTTTTCAGGTAAAGAAACGCTGTATGAGGTGGGTGAGAATAACGGTCTCAAGTCATTTGTATCCAGCACCTGCACCCTGACCTTTGTTCGCGCCTCCACATTAGTATTTTTTTCAAGTGCTTTCACTATCAATGTGTAGTGATCCTTCACTTCTCTATTAAGAATAGCTGTATTTCCTCCTTTGGTCCTTATTCTTAGAAAGCAAAAGTCTCCGAGAATGTACTCTTCAGCTTTGAACAGGTTTTCACTGTCTCCGGAAACAATTTTGTACCTTACTTCCCACGCTGGATGTGTAATGTAAACACCCATCTTGACAGGATGCCCCACATAAGTCTTAGCTGCAGAGTTCTCCTGCACGGTGACGTTGTACTCGAGGTGTGTAAACTGCA---GAGGAGTCTGTTCAAGTCGTTGGCTGCCATCACTGTCTCCAAAATGTTGGAAGAGAAGGAGCAGAAGCAGGAGCAAAGCCAAATGTCTCCCCATTGCTTAACTGTC--GGGAATCTGAAACAGAAGAAATCAGAATCGTTACCTTGGGGAAATAAAACA------AGCAAAAGTGTGTACATTGTTTTAAACTTCT-CATTAAAAAAATATTTTCCATACACATGGAATATAAAT chr4 + 94230402 63614003 63614002 63617415 63614003 63614002 63617415 3413 TTACCTTTTTCTTCATCTATTCGAAAAACTCCCATACCAGACCCGTCTCTGATGGAATACCTTATCTCCCCATCTCGTCCTTCATCTTCATCATAAGCAGATACAGTCATTACTGAGGAACCAATAGGGGCATCTTCTTTTACAAAGCCTTTATCTGCAAATACAGAGAACCGTGGAGGGTGCAAGTTCTCATTCACATCAACTACCTCAACCTCAACGTAACACGTAGAAGATAATGAAATGGGTTTTCCTTTGTCCTTGGCCCGCACAGTCAAATTATAAAGTTGTTTCTTTTCATAATCCAGTCTTTGTACAATACGTATTGCTCCACTTAGTTTATCAACATCAAAAGTGCCATCCCCACTGTCCAAAAGACTGTATCGTACTTGACTTGACTGGCCTACATCAGGATCATAGGCTTCTAACCACGTGATAATTGTTCCTTCGGGAAGATCTTCTCGAATTTTCACATGATAATTTGAAGGAATAAACTTAGGAGGATTATCATTAACATCTTCTATAGAGACTTTCAAAATAACTGTTGAAAATAACTGAGGTTCTTCAGTAGGTTGGTCCCTAGCCTCTATTTTCAAGAAATAGATGTGTTGCTCTTCATGATCCAGAAGCCCTACAACTTTCACAACTCCTGTCACAGCATTAATAGCAAACTTGTCAGTATCTGTAAGAAGAGAATATTTCACTTCTCCGTTAGCCCCTAAATCTTTATCAGTAGCTTCAATTTGAATAATTTCACTGTCTAGCTCTTTGTTTTCACTCACTTCCACAAAATAGCTGTCTTGTAGAAACTCTGGTGGGTTATCATTAGCATCCAAAATTCTTATATCTAGAAGGTGCCAGGCAGACTTCTGTGGTATTCCAAGATCATAGACAGTAACATTCAGATTATATTTATCTTTTACTTCTCGGTCAAGTGGAGACAAAATTTTCAGCATTCCACTTTCCATATCAACAATGAAACTGCTGTCTTCATTACCTCCAGAGATAACATATACTAACTTTCCATTGAAGCCAGTATCAAGATCAGTAGCATTCATAAGTATTATGCTGGAGCCCACAGGTTGATCCTCTCTTACCTCAATACTACTGGGGAGAGTACTTCTAAACTGAGGTGTATGCATATTCAAGGAGTGAGTGTCAAAGAAAACATCCTCAACTTCTCCACGACTGTGCAATTTATTTGCTTGTAGGAGCTTCTCTGCAAGCATTTTGGCAACACCAGTTTCTTCACATTGCAAGTTGACCAGCTTGCGACCAGTAGCTACAGTGATGTTGATATACAATGGTTTTGCAAAGTTTTCTCCATCTGTAGCTGTAATTTTCAAACTGTGAAAAGACATTTTAGCACCTGGGCCATCTGTTAGCGACTGCTTGAGTGAAAGTACACCAGAATTTGGATTTAGGCTAAATAAATCCAGTTCATTTCCAGATTCAATTTGGTATCTTACTAACTGGAGCTCATCAGCATCAATGGCAGATACAGTTGTTATTTGTTCTCCAACACCAAGATCCCTGGGAATTGTTCCCTCACAATTAATTTTCTCAAACAGAGGTATATTATCATTCAGGTTGTTTAAAATAATAGTCACAGGAACTTCAACTTCTCGACGATATGGTACACCCCAATCAGAAGCTCGAATCCTTAAATTGTAAACCCTTGGCATCAATTCATAATCCAAGTCTTCTGACGTACTAATAATCCCACTGAAATGGTTAATCACAAATGGTAAAGGATTTAGGTTTGCAATACTGTAGGTCACATAACCATTCTCCCCTTCATCAGGATCTTTTGCACTCACTCTCATGACACTCGTACCTATTGGCACATTCTCATCAAAGGAAGCTTTATAGGCTGTCTGAGTAAATTCAGGAGGATTACTGTTCATGCCTAGTACCTTAATTAATACTTTTGCTGAAGCTCTTCTGTCACTTGTCACAACCTCAAGTTCAAAGTGGGAGGAGTATTGTGCTTTTATGGGTTCTGAAGTGGTAATAAGACCAGTATGAGTGTTTAAATTGAATTTTACTTTGCCAGGTGTATTTTTAAATACATATTTTAAATGCGGGTAACTAGGTAGAGCTTTCACCATTATCACAGGTGTGTTTGGAGGGGCAAATTCACTTATTTCAGCTCTATATATCTCTTTTTCAAATCTGACGGGACCAGACTTAAATCGTGATGATGTCACATGAACAACTTTCACAGATGAAAACTGTGGAGGATTTCCTTTATCTTTAGCTTGAAGGGTAAGGTTGTATCCAGAAGGCTGGCTCTCCCAGTCAATGTGACCAACAGCTTTGATTCTATATTCTTTACCTCCTGGCACAGATCTCACTGTTCTGAACTGTTGAAGTGGATCACCTGCAACAATATTCAATGATGCTATTTCTCCATTTGAACCTTGATCATTGTCCTCTACAGTTACAATGGCGTAAGTTGGATCTTTGTCTGATTCTGATGGAGTCAATGTAACAGCTGTAATAACAGGGGCATATTCATTTGCTTGCTCTACATAAACAGTTAGTTTAGCCATACTGCTGATCCCACTGCTACCATACAGCTTCAGTCCACGGTCCACAGCAAGAATTTCCATCTCATAAAGCTTAGTGTCCAAGTAGTCAAGCCTACCAGTTAGAACTACCACACCACTAGTAGGATGTATAGCAAATACATCTGTTCTTTCTTTAAAGCTATAGTAGAACTCCCCATTTGTTCCTATATCGGCATCTGTCGCGCTGACTCTTGCGATGCTGGTCCTTATTGCTGTGTTTTCAGGCAAAGAAACGCTGTAAGATGTCGGAGAAAACAAAGGCCGCAAGTCATTTGTATCCAGTACCTGTACCCTGACCTTCGTGCGCGTTTCAGCATTTGTATTTTTTTCAACTGCTTTAACAGTCAGCATATAATGGTCTTTTACCTCTCTGTTAAGGATAGCTGTGTTTCCTCCCTTGGTCCGTATTCTCAAAAAACAAAAGTTTCCAAGAACATATTCTTCAGCTTTGAACAAGTTCTCATTGTCACCAGAAATAATTTTGTACCTTAGGTCCCATAATGGATTTACAATATAAATGCCCATTTTCACTGGATGCCCAACGTAAGTTTTGGCTGCAGAATTCTCATACACAGTTGCATTATACTGTGCTTGTGTAAACTGCATTGGTGAAGCATGATGTGGTATTTGATTTCCTTCACAGTTTCCAATATGCTGCACCAGCAGCATCAGCAGCAAGAGCATAGTCAAGTATCTTCCCATGGCAGCAATTACAAAGAAACCTGAAACAAGAGAAAGAAGTGTTAAGACTTACGGATGTTGAAATATTATTCAGATAACTCTTATACTTAATTTCAAACTCATACTTTGAAGAAAACTATTATATACATATCTAGGCTAAAT ......x.:......:.....:x:.....x..x.::.....x..:.....:.....:..:.xx.............x..:xx.:..:.......:...x..:..x........::.x.......:...x...........:..x:xx..:..x..::....xx::..:...xxx..x.......:..................:........:.....:..:..x........:.:x....:x..:.....:.....:.......x......x.:......x.x...:.....:...x.:....:::x:..x..:..x.xx.:.........x........x.....:..:x.x..x..:..::x.....:...:.......x:..:....:x.....:....x.........:.:.............:....:.:x........x........:.....:.:.......:.......x.:x........:x....x..:..:................xx..x.......x..::..x..x..:..:.:......:.....xx.:.x.........:.....x..:..:...:.:.:xx::..:...xx:..x:........:.x.x.:.:.:x..x.....x..:.....:x::.:...x.x...:x....x..:.......x..xx..:..:x....x.x......:.x...:.::........x..:.......::..:..:........:.x..x...:....:........................x..:....:......x.....:........:.....x.x..::x:x.:..x......::....x....x......x.....:.....:........:....:......:x.:.....:...x..::...x........x.....:.................xx............:x.....:.x:..:..:.....x........:.:.:....x..:.::.................:.....:.....:.x:.....:.:x....::.....:........:..:.::..::......x.....:.x.x..:.....:...........x...:.:..x::...x.x:.......x:..:.......:......x..:.....x:.::....:...........:..:..............x....................:........:........x.........:...::.:...:..x..x...........:......x.x.....:....................:...:...:......:.......::..x......::......::.......::....x.:...x.:...x..x..:..x..:....::.....x...................x......:..:..::x...:.....:..:.....x........:.....x.....x........:.....x..:..x.....:...........:..:........x.............:....:.:..:.......:...:..x.:.:....x..x:..:.:.....:.....:..:..:..:..:.x:.....:..x..x..x........:.:.x.:.......xx.......:...:..:....:..:............x.::::x...x.........:....:....:..:.x.x......::.....:........x.....:..x..:.....x..:........:...x:x.......xx.........x.x.....x..x.....:...........:.x......:..x........:...........:.....:..:..::::....:x..:..x.::..x..:..x.:x..x...:.............:::x..:...........:....xx.xx.::...x:...x.:x......:..:.:.x...:........:.x:xx:......:.......x:....x.........:.......x.....::.:.....x.::...x:...x.x:..:..:.....x.:............x.....:.................x.....:..x.:x..:........::....x..x..:.x:..:..::...:x..x.....:....::.....x.....x..:.....x..x...x................:..x..x..:..:.....x..::....x..:..x.....:......:x...:.::.......:.:....:..:....::.....x.x:..:...........:.....:..:..x:.:........x..:..::.:..x........x..x.....x.x...:.....::x...x..:..x..:.....x..:..x.:...:..::....:::.........x.x......x..x.....x..x..x..:...:.......x..:..:..x.::.:x..x.....:..:.....:........x........x.......:.....xx.........:....:..:..............:.....:..x..:.:...:.....:..........:x....:.........:..x..:..x........:.:........xx........:..:.....:..:.....:..x........:..x.....:..x.................:...........x..............:..............x..x..x..x..:..:..x..:.x..................:.....:...........:..x....::..x:....x.............x......x..x:...:::.:..:..:..:..:..:.....:.....:........:........:.......x......:.:...:.......:...:....::..:................:...:...:....x..:....:..............xx.....::x.....x.::...:....::.....:..x..x........x..:.....:..:........:.....x.:...:..x:.:..:....xx:xx.............---.x.:..:x..x.xx:..xx...::.x..x....x..:.....x...:..x.xx..x..x.x...x....:.....x..:...:.:...:.....x..xxx.x.xx.--:.:..:........::.....xx..x:.::xx..:.xx..:x:x.:...:.------..xx..xx:x.:...x.x:...:.....:x.-.x..:..:...xx.x..x:.....:..xx.:xx..... 3175M3I106M2I51M6I31M1I38M 2580/3401 75.9% 3413/94230402 0.0% 12/3401 0.4% 123092556 67121999 +3326 chr4 + 190214555 186718537 186718536 186718596 60 TGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATCGCTTGAACCCGGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .....x......:.........::::.......:x.xx.x...x.:.........:.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 110685332 79529223 +3072 chr4 + 190214555 186732117 186732116 186732154 38 TTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTAATGGG chr4 + 94230402 79014399 79014398 79014436 79014399 79014398 79014436 38 TTTTTTTTGTTTGCTTGTTTTGTTTTGTTTTTAACTGG .............:....................:x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 107717718 82496837 +3581 chr4 + 190214555 186733371 186733370 186733443 73 TGCACCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGCTTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.........:..:........x.xx.x...x.:........::.:..x.xx:.x:..:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 110700166 79514389 +4051 chr4 + 190214555 186739348 186739347 186739431 84 ACATGGTGGCGGGCGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATCACTTAAACCCGGAAGATGGAGACTGTGG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGGTGCACGT--GTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....:.x:...--...:.:...........::........x..x.x...x.....:.....:....x.xx:.:....:. 16M2D66M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% 110706152 79508403 +3162 chr4 + 190214555 186741165 186741164 186741222 58 TGAGATCATCATCTAATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTAGACAGAGTTTT chr4 + 94230402 60095451 60095450 60095508 60095451 60095450 60095508 58 TAGGATTAGCATTTATTTCTACTTTTTTTTTATCTTTTTTTTTTTTGGATGCAATTTT .::...:.x...:..x....x..........x.:............:..::x.:.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 126645714 63568841 +3013 chr4 + 190214555 186742723 186742722 186742768 46 ACTACCTCTGTTTATTTTTTGGTTTTTTGTTTTTCTTTTTTGAAAG chr4 + 94230402 89615112 89615111 89615157 89615112 89615111 89615157 46 ACTACCTTTGTTTGTTTGTTTGTTTCTTGTTTTTGTTTTTTAAGAG .......:.....:...x..x....:........x......:.:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 97127611 93086944 +3675 chr4 + 190214555 186763958 186763957 186764034 77 GTCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGCTGGAGTTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x....x....:.:...........::........x.xx.x...xx:.........:.:....xx:.x:..... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 110730757 79483798 +3570 chr4 + 190214555 186795942 186795941 186796001 60 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::.x......:...........::........x:xx.x...x.............:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 110762737 79451818 +18346 chr4 + 190214555 186804357 186804356 186804812 456 CGTGAACGCAAATAATTCCTAATGACCACATCAAAGGCTCATATCATTTATCCAGATAATATGCCAAGAATCTGCAAGCACCTTGACAAGGAAACTTCTTTATGTGTAATATAAATCACGAATTGCTACCTTA-TTTAAAAACTGGATGATGATAACAGCTCTGTGACTCCATAAATTTGAGTTTCTAATATTATGCAGAAGAACATAAAACCTGTTTATGCATTATAATGCAGCAATAATGTATC--TTCGCAATCATTGGCATAACTAAATCCACTAACTTGCCTGTAGCATGCATAATGACAAGTTTGCAAAATGCTCAG-AATTTTAAATTTTGATTCACCTGCAGTTCAAATCCCTGCAGCAATTAAAGAAAAAACACACATATCAAAGCAACAAATACTTCTA--ACGGAG-CAAGATACCGTTTTCAGGGAGAGTGTTTTCA-TGTGCCCTTTGAGG chr4 + 94230402 63651772 63651771 63652222 63651772 63651771 63652222 451 CATGCATGCAAATAATTCTTAATGACCCTATTTCATACTCCTCTACTTCATCAGTATGATACCTCATGTATCAGTAAGTAATGTGACAAGGGAACTTCTTTATTCCTGATACAAATCAATGATTGCTGCCTTAATTTAAAAGTCGAGCAATGATAA-AATGCTGTGACTCAATAAATTCGAGCTTCTAGTATTATGCAGAAGAACATAAAACCTGTTTGTGCATTATTATGTAGCAATAATGTATCCTTTCCTAATCACTGTCGTACCTATCTTTTCTAGCTTGCCTGTAGCATGCATAGTGAAATGTTTGAAAAATATGGAGAAATTCTAATTTTTCATACACTTGCTTTATGAATCCCTACAGCTATTAAAAAAAAA-----------AAAGTTA-AAATCTTTATACCATGAAGATAAAATACAATTTACAGAGTATATTTTCTTATTATTGCCTTTGAAG .:..x.:...........:........x:..:xx.x:...x.x.xx..:...x:x..:...:x:..x.x...x.:...:.x:x........:...........x:x.:...:......xx:......:.....-.......:::.::::.......-.::x.........x.......:...:.....:.............................:........x...:..............--...x:.....:..x.:..x...xx.::x...:...................:...x.x.....x.....::xx..-....:...x....x..x...:...xx.x::.......:....x......:.....-----------....:x.-....x:..x..--.:.:..-:..:....x:...x...:.x:x:.x..:.:.-.:.xx.......:. 133M1I22M1D89M2I75M1I55M11D7M1D11M2I6M1I31M1I14M 328/443 74.0% 451/94230402 0.0% 21/443 4.7% 123152585 67061970 +6875 chr4 + 190214555 186806687 186806686 186807011 325 GTTTGCATTTTC-CCCATTTCTATGAAGTATCAAGTGTTGAAAATTCCTCTACAGTCCATAGGCATTTT-GTTCTGGCTCCAA------------------AGAAAATTATACTTTTGAAACATAAGGAAAGATTTTACAATGTGTATCTTTTCTTTCAAAT-GAGGCTTGACTTTTAAGCTTGACGTTTGAAAACTTGAAGATGGACGACATTGATAAATGATACTTTCATATACAGAAGGAAGAAAAGGAATTGGAGAACAAGCTTATAACTGCAGTTTGTAAAATCTGCTAATAAGCCTGCTAATGGGAGACAGATTAAGGAATGTATTTTGCCACAGACTTA chr4 + 94230402 63653020 63653019 63653349 63653020 63653019 63653349 330 GTTTACATTCTCACCCCATTTTGTGAAGTGTGAAATGTTAAAAGCAACTGTAGAGATCACAAGCATTTTAGTCCTGGCTTTAAGTAAAAGAAACACTGTAAAAAAAGATGTTGTTTCCTATCTTAAGGAAAGCTTTTGCAATACTGACATTTTCCTTTGAACAGAAGTGTCAC-----------ACACTTAAAAAATTGTTCACTAGTGTTGCAGATATATATT--TTTCA---GTGGAAGGGAATAAGGGACATTATAAATATGCCTACAACAAGCCTTTACAAAATCTGCTGGTGATCTCACTAATGGAAGTGAGATTGTGGAATATATTTTGCTTTGGGTTTA ....:....:..-...xx..:.:......:.x..:....:...::xx..x..x..x:..:.:.......-..:......::..------------------.:...:x.:.xx...:xx.x.x.........x....:....::xx.:x.....:..::..:-..:.:x.x..-----------..::..:....x...xxx.:x:::.x:::x....x..:x.--.....---:::.....:.:x..:...xx.x:x:..:.x..:..:...x:xxx...::..........::.:.x.:::.......:..xx.....:x.....:........:x::.::... 12M1I56M1I13M18I61M1I10M11D40M2D5M3D112M 196/309 63.4% 330/94230402 0.0% 37/309 12.0% 123153667 67060888 +3009 chr4 + 190214555 186813933 186813932 186813973 41 AAAAACAAAAACAAAACAAAACCAACAAAACAAAACAAAAA chr4 + 94230402 70032970 70032969 70033010 70032970 70032969 70033010 41 AAAAACAAAAACAAAACCAAACCAACAAAGTAGAAAAAAAA .................x...........::.:..x..... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 116780963 73433592 +3074 chr4 + 190214555 186817490 186817489 186817552 63 CTTTGCTAATTACTAATAATGTTAAGTTTTGTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTTT chr4 + 94230402 53858826 53858825 53858888 53858826 53858825 53858888 63 CTCTGATAATTTAGAATAATGGTGAGGTGTGTTTTTTGTTTGTTTGTTTGTTGTTTTTTTTTT ..:..x.....xxx.......x.:..x.x...x....x...x.......x..x.......... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 132958664 57255891 +3595 chr4 + 190214555 186849664 186849663 186849746 83 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCAGGAGGTAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......x:..--....:.:...........::........x.xx.x...x::.......:...:..x.xx:..:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 110816467 79398088 +3630 chr4 + 190214555 186877309 186877308 186877425 117 TGTGTGTGTGCGTGTGTACATGTGTATATGTATGTATATGTGTGTGCATGTGTACATGTGTATATATGTGTGTGTGCATGTGTGTGCATATATGTGTGTATAAGTG----TGTGTGTATAT chr4 + 94230402 5214205 5214204 5214321 5214205 5214204 5214321 117 TGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCAC----ACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ..::x......x::..x:..:.::.x::...:..:::.x....x....:----...::.x..::.:.:..::.x.............::.x.:......:.:x:..----......:.:.. 49M4D53M4I11M 72/113 63.7% 117/94230402 0.0% 8/113 7.1% 181663104 8551451 +3772 chr4 + 190214555 186877314 186877313 186877477 164 GTGTGCGTGTGTACATGTGTATA-TGTATGTATATGTGTGTGCATGTGTACATGTGTATATATGTGTGTGTGCATGTGTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGC------ATCCGTGTGTGCGCAAGTGTCTGCACACACAT--------CTACGTGTATGCATTTGCATG----TGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCACAT ...x.x.....x.:...x.:.:.-::xxx..::.x.....:x....x.:..::------..x:.......:...x....x....:.:.::.--------x.::....:.::..x..:...----.:....:.:.x.:........:::..:.x.......:.::. 23M1I29M6D32M8D21M4D41M 95/146 65.1% 147/94230402 0.0% 19/146 13.0% 181663139 8551416 +4670 chr4 + 190214555 186877350 186877349 186877491 142 GTGTGCATGTGTACATGTGTATA-------TATGTGTGTGTGCATGTGTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATAT chr4 + 94230402 5214175 5214174 5214321 5214175 5214174 5214321 147 GTGGGGGTGTGGATATGGGCACAGCAGCAGTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGT--GTGTGCATGCAGATGTGTGCACAT ...x.x:....x.:...x.:.:.-------.:::x.....:x....x.:::....x::......:::......x..:::.:.:..x..:..x...:::.x..:..:......:.:.x::..:.--.....:...:.x.......:.:.. 23M7I93M2D24M 90/140 64.3% 147/94230402 0.0% 9/140 6.4% 181663175 8551380 +3470 chr4 + 190214555 186877364 186877363 186877504 141 ATGTGTATATATGTGTGTGTGCATGTGTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATATGTATATGTGTGTG chr4 + 94230402 21109187 21109186 21109324 21109187 21109186 21109324 138 ATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTAT--ATGTGTATGAATATGCATGCACACGAGATTACA-GTTTCTGTGGGTG ..x..:x....::.......x:x....x.:.:..x...:...::x:.x:.:.::x:..:..:x.:..:..x.:..:x::..:x.x.....:.--........:x:.:..:...:.:.:.x.xx..:.-..x.x....x... 92M2D33M1D13M 84/138 60.9% 138/94230402 0.0% 3/138 2.2% 165768177 24446378 +3042 chr4 + 190214555 186877379 186877378 186877445 67 TGTGTGCATGTGTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGT chr4 + 94230402 86633924 86633923 86633990 86633924 86633923 86633990 67 TGAGCGTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ..x.:.:::...:..:x:.......x......x:..:...........::.x...x.::..x...:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 100243455 89971100 +3662 chr4 + 190214555 186877390 186877389 186877505 116 GTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATATGTATATGTGTGTGC chr4 + 94230402 5214210 5214209 5214319 5214210 5214209 5214319 110 GTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGT------GTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGTGCAC ......x:..:x.:::.:..xx.......:.:.x:.------..:.::.::::::.x..:....:..:..x..:..:......::::x.::.......::...:.x.......::. 36M6D74M 67/110 60.9% 110/94230402 0.0% 6/110 5.5% 181663180 8551375 +3494 chr4 + 190214555 186877408 186877407 186877569 162 ATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATATGTATATGTGTGTGCTTGTGTACATGTGTATATATGTGTGTGTGTATGTGTATATATGTGTGTATGTGTGTGTATGTTT chr4 + 94230402 21109179 21109178 21109331 21109179 21109178 21109331 153 ATAAGGAAATTTGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCA------TGCTTCTGTGTATATGTGTATGAATATGCATGCACACGAGATTACA---GTTTCTGTGGGTGTACAGTT .....x:x:.x..:x....::.:...x.x.x....x.::...x.:.:....:x:::....::x:..:.::x...::..:.:..:x:.------..:x::......:........:x..:..::..:::.:.x.xx..:.---..x.x....x.....::x.. 87M6D46M3D20M 90/153 58.8% 153/94230402 0.0% 9/153 5.9% 165768229 24446326 +3229 chr4 + 190214555 186877408 186877407 186877482 75 ATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATG chr4 + 94230402 86633923 86633922 86633991 86633923 86633922 86633991 69 ATGAGCGTGCGTGCGTAAGTATATGTTT------GTATACATGCGTGTGTATATACATTTGTATGCATCTGTATG ..:..:...:...::..x:.:.......------..:..:...:........:.::..x...:..:..x.:.... 28M6D41M 50/69 72.5% 69/94230402 0.0% 6/69 8.7% 100243485 89971070 +3174 chr4 + 190214555 186877450 186877449 186877511 62 GTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATATGTATATGTGTGTGCTTGTGT chr4 + 94230402 86633929 86633928 86633990 86633929 86633928 86633990 62 GTGCGTGCGTAAGTATATGTTTGTATACATGCGTGTGTATATACATTTGTATGCATCTGTAT ...:...::.:x........x.....::..::..........::..x...:..::::...:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 100243521 89971034 +3563 chr4 + 190214555 186877467 186877466 186877628 162 TGTGTGTATGTATATGTGTGTATATGTATATGTGTGTGCTTGTGTACATGTGTATATATGTGTGTGTGTATGTGTATATATGTGTGTATGTGTGTGTATGTTTGTATATGTGTGTGTATGTGTGCATGTGTGTATGTG-------TATATATGTGTGTATGTGTGTGTA chr4 + 94230402 79265520 79265519 79265678 79265520 79265519 79265678 159 TGTGTGTGTGTGCATGTGTGTGGCTGTATATACATACACGTGTGCACACGCAAACATATTTGTGTCCACA-----ACACCTCTATATAAATGCAC-----TTTGCCTTTTTGAGTGTACAAATGCATTTCTGTAAGTGCTCAGCACTTGTATTTATACATTTATGAGTA .......:...::........:xx.......:::.:::.x....:...:.::x.:....x.....x:::.-----.:.:x.x.:.:..x:..:::-----....:x.x.x..x.....::x:.....x.x....x...-------:x.:...x.:.::..x.:..x... 70M5D20M5D38M7I24M 95/152 62.5% 159/94230402 0.0% 17/152 11.2% 107611947 82602608 +3625 chr4 + 190214555 186877537 186877536 186877682 146 TGTGTATATATGTGTGTATGTGTGTGTATGTTTGTATATGTGTGTGTATGTGTGCATGTGTGTATGTGTATATATGTGTGTATGTGTGTGTATGTTTGTATATGTGTGTGTATGTGTGCATGTGTGTATATA---TGTGTGTGTGTATA chr4 + 94230402 21109190 21109189 21109328 21109190 21109189 21109328 139 TGCTTATACATGTGTGTCTCTGTGGGCGTATT--TATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATG--------TGTATGAATATGCATGCACACGAGATTACAGTTTCTGTGGGTGTACA ..:x....:........x.x....x.::.:..--.......::x:::..:.::x.:...::x...::....:..:x::..:x.x.....:....--------...:..x:....::....:::.x.xx..:.---.x....x.....:. 32M2D60M8D30M3I14M 87/136 64.0% 139/94230402 0.0% 13/136 9.6% 165768347 24446208 +3138 chr4 + 190214555 186877570 186877569 186877625 56 GTATATGTGTGTGTATGTGTGCATGTGTGTATGTGTATATATGTGTGTATGTGTGT chr4 + 94230402 92759685 92759684 92759740 92759685 92759684 92759740 56 GTACATTGGTGCACATTTGTGCATGTGTTGAGATATATATATGTGTGTGTGTGTGT ...:..xx...:::..x...........xx.x:.:.............:....... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 94117885 NA +3024 chr4 + 190214555 186877574 186877573 186877640 67 ATGTGTGTGTATGTGTGCATGTGTGTATGTGTATATATGTGTGTATGTGTGTGTATGTTTGTATATG chr4 + 94230402 27325491 27325490 27325557 27325491 27325490 27325557 67 ATGCGTATGATTGTATACACCTGAACTTAAATATGTGTGTGTGTATGTGTGTGTACGTACATATATG ...:..:..xx...:.:..:x..x::x.:x:...:.:..................:..x::...... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 159552083 30662472 +3245 chr4 + 190214555 186877601 186877600 186877690 90 TGTGTATATATGTGTGTATGTGTGTGTATGTTTGTAT--------ATGTGTGTGTATGTGTGCATGTGTGTATATATGTGTGTGTGTATATGTGTGTG chr4 + 94230402 21109190 21109189 21109287 21109190 21109189 21109287 98 TGCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATG ..:x....:........x.x....x.::.:...:...--------..:.::x:..:.::x.::.:..:....:x:...:x.x.............:.. 37M8I53M 60/90 66.7% 98/94230402 0.0% 8/90 8.9% 165768411 24446144 +3349 chr4 + 190214555 186899650 186899649 186899746 97 GTGGTGGGTGCCTGTAATTCCAGCTACTTGGAAGGCTGAGGCAGGGGGAACCCTTGAACCTGGGAGGTAGAGGTTTCAGTAAGCCGAGATGGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x::.--....:.............:.........x.xx.x.:.:.x........::.:..x.xx:..:.x:..------:.x...:..... 10M2D67M6D12M 64/89 71.9% 89/94230402 0.0% 8/89 9.0% 110866449 79348106 +3195 chr4 + 190214555 186905234 186905233 186905329 96 TTCTTTCTTTTTTTCTGTC-TTTATTTTTCTTTCTTTCTTTCTCTCTCTTTTCTTTCTCTCCTTCCTTTCTCTCTTTTCTTTCTTTCTCCTTCCTTC chr4 + 94230402 51335296 51335295 51335392 51335296 51335295 51335392 97 TCCTTATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTTCCTCTTTC .:...x:x.:.....x...-:..:x:x.xx....:.xx......x.xx..:..x.......:..x:...:...:....:..:...::.:.:..:... 19M1I77M 63/96 65.6% 97/94230402 0.0% 1/96 1.0% 135569938 54644617 +4352 chr4 + 190214555 186905271 186905270 186905420 150 TTTCTCTCTCTTTTCTTTCTCTCCTTCCTTTCTCTCTTTTCTTTCTTTCTCCTTCCTTCCCTCCTTTCT-TTCCTTCTTTCCTTCTTTCTTTCTTC--------CTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTCCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176426 50176267 50176266 50176426 160 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTT-TGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTTCAAGACCCACCTCCCCATTTTCTTGTCTCCTTCTTTTCTTTCTCCTCCATTCTTCACATATCCCTT .....x....x:.x..:..::.:........x..:x:::x....-.x:x.:x...:...:x.:....x.-...x..:..x:...............--------.:...::x:......x::......:..:...:..--...x.:....x:x.x.::... 44M1D24M1I26M8I34M2I21M 101/149 67.8% 160/94230402 0.0% 12/149 8.1% 136729004 53485551 +3153 chr4 + 190214555 186905304 186905303 186905377 74 CTCTTTTCTTTCTTTCTCCTTCCTTCCCTCCTTTCTTTCCTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTT chr4 + 94230402 57372026 57372025 57372099 57372026 57372025 57372099 74 CTTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATT ..:...::......x::...x:.:...:..:::::..xx..x..x.::........:...:....x.....x.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 129533278 60681277 +3530 chr4 + 190214555 186905321 186905320 186905447 127 CCTTCCTTCCCTCCTTTCTTTCCTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 63697117 63697116 63697239 63697117 63697116 63697239 123 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTT--TGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCC--CCTCTTTTCTTTCTTCCTTTTTATTT .:..x:.:.:........:xx:x..:.:..:..:....:.:x...:.::x....xx....--.x:...xxx:.:..x...::.:x.xx:......:..:--.:.::..........:......x... 60M2D37M2D26M 78/123 63.4% 123/94230402 0.0% 4/123 3.3% 123208204 67006351 +3013 chr4 + 190214555 186905367 186905366 186905447 81 TTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT ..:....::..x.:...x:.:......:::.:..xx:.x..x::.........:...::...x.....x..xx:.x...:. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 129533338 60681217 +3404 chr4 + 190214555 186905371 186905370 186905460 90 TTTCTTTCTTCCTTCCTTCCTTCCTTCCTTC--CTTCCTTCCTTTCTTTCTTTCTTTCT-TTCTTTCT-TTCTTTTTTTTTTTCTTTCTTTCTT chr4 + 94230402 50176267 50176266 50176360 50176267 50176266 50176360 94 TTTCTGTCTCACTGCTCTCCTTTCTTCCTTTATCCGCCCACTTTTGCATTGTTCTTTCTGTTCTTTGTATTCATTTTTGTCTTCTTTCTTTCTT .....x...:x..x.::.....:.......:--.:x..:x.:...x:x.:x........-......x.-...x.....x.:............. 31M2I26M1I8M1I25M 68/90 75.6% 94/94230402 0.0% 4/90 4.4% 136729104 53485451 +3257 chr4 + 190214555 186905371 186905370 186905451 81 TTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTCT chr4 + 94230402 57372029 57372028 57372109 57372029 57372028 57372109 81 TTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .......::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x.....x..xx:.x..... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 129533342 60681213 +3064 chr4 + 190214555 186905373 186905372 186905455 83 TCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTCTTTCT chr4 + 94230402 57372027 57372026 57372109 57372027 57372026 57372109 83 TTTTTCTTTTCTTGTCCCTGTCCTCCTTCTCCCTTTGACTGCTGTTTTTCTTTCTCTCTCCCTTGCTTTCATTAGCTGTTTCT .:......:::.:x.:...x:.:......:::.:..xx:.x..x.:.........:...::...x....:x..xx:.x..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 129533346 60681209 +3309 chr4 + 190214555 186906649 186906648 186906715 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x::...........:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 110873438 79341117 +3276 chr4 + 190214555 186924892 186924891 186925008 117 GTTTGTGTGTGCGTGTTTGTGTGTGCATGTTTGTGTATGTGCATGTGTATGTTTGCATGTTTGTGTGTCTGCATGTGTGTGTGCATGTTTGTGCATGTTTGTGTGTGTGCATGTTTG chr4 + 94230402 21109191 21109190 21109297 21109191 21109190 21109297 107 GCTTATACATGTGTGTCTCTGTGGGCGTATTTATATGTACTCACATATAC----------TCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATG .:..:.:::..:....:.x....x..:.:...:.:.:.::x..::.:..:----------.:....::..::.:..:...::x....:..x..::.:.x.....:..x::...:x.. 50M10D57M 64/107 59.8% 107/94230402 0.0% 10/107 9.3% 165815701 24398854 +3053 chr4 + 190214555 186924979 186924978 186925047 69 TTTGTGCATGTTTGTGTGTGTGCATGTTTGTGTGTATGTGCATGTGTGTGTGCATGTTTGTGTGTGCAT chr4 + 94230402 85834539 85834538 85834607 85834539 85834538 85834607 69 TTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACAT ......:x...x..........::.:..x:...:x:::.:...:...:x:.:.......:..::::... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 101090440 89124115 +3981 chr4 + 190214555 186925008 186925007 186925115 108 GTGTGTATGTGCATGTGTGTGTGCATGTTTGTGTGTGCATGTGTGTG----CATGTTTGTGTGTGTGCATGTTTGTGTGTGTGCATGTTTGTGTGTGTGCATGTTTGTGTGT chr4 + 94230402 5214204 5214203 5214315 5214204 5214203 5214315 112 GTGCAGGTGTGCCCATGGGCACGCATCCGTGTGTGCGCAAGTGTCTGCACACACATCTACGTGTATGCATTTGCATGTGTGTGCGCAAACGTGTGTGTGCATGCAGATGTGT ...::x:.....x::..x.:::....x:x......:...x....x..----..::.:.::....:.....x.x::.........:::xx:.............:xx:..... 47M4I61M 71/108 65.7% 112/94230402 0.0% 4/108 3.7% 181710804 8503751 +3184 chr4 + 190214555 186926036 186926035 186926109 74 AAATATATGTATACACATATGTATATAAAATACATATATAAATTACATTAATGTAATTAGTATAAATATATGTT chr4 + 94230402 15987011 15987010 15987084 15987011 15987010 15987084 74 AAATATGTATATGTAAATATGTAAATAAAATACATATTCAAGCAACTTTGTTGCTATTGAAATAAGTATTTTTT ......:.:...::.x.......x.............x:..::x..x..:x..:x...::x....:...x.x.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 170939025 19275530 +3295 chr4 + 190214555 186926263 186926262 186926328 66 ATAATATATAATAGCATACACATACATATATGCAATATATGTAATATGTGTATGTATATATAATAT chr4 + 94230402 57888252 57888251 57888317 57888252 57888251 57888317 66 ACAAGTTACAATGGCATTCTTATATGAATATGTAATCTATGTGTTATGTGCATGTATATATCATAT .:..xx..:...:....x.x:...::x.....:...x.....:x......:..........x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 129038011 61176544 +3446 chr4 + 190214555 186937650 186937649 186937729 80 CATGGTGGTGCACACCTGTAGTCCAAGCTACTCAGGAGGCTGAGGCAGGAAAATCACTTGAACTCAGGAGGTGGAGGTTG chr4 + 94230402 76033197 76033196 76033274 76033197 76033196 76033274 78 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ..::.........:--......:.x.......::::........x.xx.x:..x.........:...:..x.xx:..:.. 14M2D64M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 110904453 79310102 +6423 chr4 + 190214555 186980466 186980465 186980719 254 AGTTCACATGGTGTTGTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGG-GTTACAAGCATTCTCACCAGAGGGGATGCTTTGGAAGTTTTGCATTATTCATGTGTAAGGCAAATTCACGAATGTTAAGAGTTGGAAAACAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGGAGAACTGAGGAAGACAGATGGTCTGGAAGA----TTTTTAGTGTCAGATCTGAACT chr4 + 94230402 63701880 63701879 63702123 63701880 63701879 63702123 244 AGTTCACATGATCCTCTGTGTAATTACCTTGGTATTATAATTGCCCTCTGTAA------CTGCCTATGCTGGAAATAGTGTAAGT-TTCTGACCAGGGGGGATGTTTTTACATTATTGCATTATTCATGTTTAAAGCAAGTTGGTGAGGAGTATAA--TTGAAAAGAGAGAAAACAAGGAATTTAGATTAAAGCCCTATATAGTGAA---AGGAATTTG---GGTTTGGAAAGTACTTTTTGGATGCCAGAATTTAATT ..........:.x:.x..x.....x..:.x:x.:..:......:.:..:.x:.------...::.:..:....::-:x.::...:-....x.....:.......:...x:x.x.x...............x...:....:..x::..:x:x..x:.--.x.....x.:x......x.::.....:.x:....::...x.x.:.x...---.....xx::---...:.....::----....x::..:....x:.x..:. 53M6D16M1I9M1D70M2D49M3D9M3D11M4I22M 160/239 66.9% 244/94230402 0.0% 20/239 8.4% 123278586 66935969 +3466 chr4 + 190214555 186987368 186987367 186987493 126 CAGTGGCCCTTGTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT--TCTTTTCTTTTCTTTT---CTTTTCTTTTCTTTTCCTTTCCTTTCCTTTTCTTCTCTCTCTCCTTCTCTCTCTCTCTCTC chr4 + 94230402 89201208 89201207 89201337 89201208 89201207 89201337 130 CAGCAGCTCTCATG-CTTTTGGCTATTTTTCTTTTCCTTTTTTTCCTTTAAGCTGTACTTTTCTTGTTGACCTCTCTCCCTTTTTTTTTTCATGCCCTTCCTTCCTGTCTCCACTTAACATCCCATTTCTC ...::..:..::.x-.....xx:.x:..........:...:...:....--x..x.x........x.---.:.:...::::....::....x.x:....:::.:..x....:x...xx.x::.:x.:.... 14M1D34M2I16M3I61M 81/125 64.8% 130/94230402 0.0% 6/125 4.8% 97786160 92428395 +3176 chr4 + 190214555 187002096 187002095 187002139 44 TTTTAGTG--GGGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGA chr4 + 94230402 29689838 29689837 29689883 29689838 29689837 29689883 46 TCTTAGTGTTGGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTAA .:......--...........x......................:. 8M2I36M 41/44 93.2% 46/94230402 0.0% 2/44 4.5% 157312258 32902297 +3015 chr4 + 190214555 187002098 187002097 187002144 47 TTAGTGGGGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGG chr4 + 94230402 89314588 89314587 89314634 89314588 89314587 89314634 47 TTGTTGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTGAGGG ..:x....x........................xx......x..x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 97687510 92527045 +3410 chr4 + 190214555 187021246 187021245 187021328 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGAAGGCTGAGACAGGAGAATTGCTTGAACCAGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........:.........x.xx.x...x::........x:.:..x:xx:..:..:.. 9M2D72M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 110988049 79226506 +3294 chr4 + 190214555 187071332 187071331 187071406 75 GACTAGTTTCTCTTCCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCCCTTCCTTCCTTCCCTCCCTCCCTC chr4 + 94230402 57538438 57538437 57538510 57538438 57538437 57538510 73 GATTTGTTACTTTTTCTTC--TTCACTCCCTCCTTCCTCCTGTTATTTTCTCTTCCTTTATTCCCTCCCTCCTCC ..:.x...x..:..:...:--...x:...:..:...:.:..x.:x..:..:.......:x............::. 19M2D54M 52/73 71.2% 73/94230402 0.0% 2/73 2.7% 129532894 60681661 +3821 chr4 + 190214555 187071337 187071336 187071614 278 GTTTCTCTTCCTTTCT----TTCTTTCCTTCTTTCTTTC----TTTCTTTCTCCCTT------CCTTCCTTCCCTCCCT---CCCTCCCTTCCTC---------CTTCCTTCCTTCCTCTCCTCTCCTCCTCTCTTTTTCTTTTCTTTCTTTCTTTCTTCTC---TTTCTCTTTCTTCCTTTCTTTCTTCCTCCCTTCCTTCCTTCCTTCCTCTCCTCCTCTCTTTCTTTCCT--TCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTCTTAT------ATAAATTTAAG---------GTATACAAGTGCAATTTTGTTCCATG chr4 + 94230402 85792636 85792635 85792959 85792636 85792635 85792959 324 GTTTCTCTTTTTCTTTAAATGTCTTTTCTTAGTTTTCACACCATTTCATTTCATCTTGAGTTGTCTTTTTCCTTTCTCTAAACTTACTCTTCGTCATTAAAATACTCGTTTCACTTCTTCTCTCTGCCTTTTTCCTGTACATGTTTTTCATGTTTTCTTCTCAAATTCATTTCTCTACTCTGCCTCGTTAATCCCTTCCCTCCCTTCCTCCTCCTCTTTGATGTTTCTGCCGCGGTCTTTAGCTGTTTCCCAACAGATTTCTTAGCTCTTATTGCCTGATAAAGCAGAGGGCCAATTAGCCCACAAGCGAACCTTTCCTCCATG .........::.:.:.----x.....:...xx..:.:x.----....x..::x:...------:...::.:.::..:..---.::x.:....x..---------..:x:...x:.:..:::....x.:::.:..:.x.x.x.x.:....x.x:.........---..:x.:.:...x.::.x.:.:x..xx........:...:.:.:.....::..::xx.x.....x:.x:--..:..xx:.x:....:xx.xxx:...:.xx.......------.....x:x:..---------.:x:.....:.x.x:...x:...... 16M4I19M4I14M6I16M3I13M9I58M3I68M2I37M6I11M9I26M 170/278 61.2% 324/94230402 0.0% 46/278 16.5% 101278701 88935854 +3539 chr4 + 190214555 187071348 187071347 187071572 225 TTTCTTTCTTTCCTTCT------------TTCTTTCTTTCTTTCTCCCTTCCTTCCTTCCCTCCCTCCCTCCCTTCCTCCTTCCTTCCTTCCT-------CTCCT-CTCCTCCTCTCTTTTTCTTTTCT--TTCTTTCTTTCTTCTCTTTCTCTTTC------TTCCTTTCTTTCTTC--CTCCCTTCCTTCCTTCCTTCCTCTCCTCCTCTCTTTCTTTCCTTCCTTTCTTCCTTCCT-TCCTTCCTTCCTTCCT chr4 + 94230402 67728277 67728276 67728532 67728277 67728276 67728532 256 TTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACCCATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCT .....x:..x..:.:..------------.......x.x...x:x..::.::..::.:....x.x:..:..:.x.x:.:..:...x..:x:..-------.....-..x..:::.:.x.:....x::.:--.......:.:x.:....::x..x::.------x...xx..:.:.:.:--....:..::..:.x...x:.::.....xxx..x..:...xx..:...x..xx.:.:.:.-.x.:..:x.x.:.... 17M12I64M7I5M1I23M2I26M6I15M2I59M1I16M 137/225 60.9% 256/94230402 0.0% 31/225 13.8% 119343071 70871484 +3119 chr4 + 190214555 187071349 187071348 187071408 60 TTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCCCTTCCTTCCTTCCCTCCCTCCCTCCC chr4 + 94230402 38772185 38772184 38772238 38772185 38772184 38772238 54 TTCTTTTTTTC------TCTGTCTTTTTTTTTCCCCTCCTCTTTTCCCATCCTCCCTCCC ......:....------...x.....:...:....:....:::.....x:.......... 11M6D43M 44/54 81.5% 54/94230402 0.0% 6/54 11.1% 148299164 41915391 +3160 chr4 + 190214555 187071354 187071353 187071408 55 TCTTTCCTTCTTTCTTTCTTTCTTTCTCCCTTCCTTCCTTCCCTCCCTCCCTCCC chr4 + 94230402 49829854 49829853 49829908 49829854 49829853 49829908 55 TTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTC .:...x.::x...........:.....:.:.......::....:...:.:.:.:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 137241500 52973055 +3377 chr4 + 190214555 187071462 187071461 187071557 96 TCTTTCTTCTCTTTCTCTTTCTTCCTTTCTTTCTTCCTCCCTTCCTTCCT------------TCCTTCCTCTCCTCCTCTCTTTCTTTCCTTCCTTTCTTCCTTCCTT chr4 + 94230402 14684115 14684114 14684222 14684115 14684114 14684222 108 TCTCTACTCTTTTTCTGATTCCTCCCTTCTTCCTCCGTTTCTCACTTGCTCTCCCCAACAAGCCCCCCCTCTCCATCTCTGTATCCTTCCTTACGCTGTCCCTCCCCT ...:.x:...:.....xx...:...:.....:..:.x.::..:x...x..------------:..::.......x:....x.x..:......x.x:.x.:...:..:. 50M12I46M 65/96 67.7% 108/94230402 0.0% 12/96 12.5% 172387347 17827208 +3105 chr4 + 190214555 187071499 187071498 187071546 48 TCCCTTCCTTCCTTCCTTCCTCTCCTCCTCTCTTTCTTTCCTTCCTTT chr4 + 94230402 47060627 47060626 47060674 47060627 47060626 47060674 48 TCCCTTCCTTCTTCCCTCTCCCTCCTCCTCTCCTCTTTTCCTCATTTT ...........:.:...::.:...........:.::......:x:... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 140010872 50203683 +3550 chr4 + 190214555 187082767 187082766 187082841 75 GTGCACCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTGGAGCCCAGGAGAGCAAGGCTACGGA chr4 + 94230402 76033204 76033203 76033278 76033204 76033203 76033278 75 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGA ......x......::..........::........x.xx.x.:.x....x..:.....:..xx:x:....:::.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 111049563 79164992 +3705 chr4 + 190214555 187126709 187126708 187126787 79 CTTCTTCCTTCCC-TTCCTTTCTCTTTTCCTTCCTCCCTTCTTTCCCCCCTCCCTCCCTCTCTCTCTCTCTTTCTTTCTT chr4 + 94230402 49829850 49829849 49829928 49829850 49829849 49829928 79 CTTATTTTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCC-CCCTCCCTCACACACACACTTTGTTTTTT ...x..::.x...-..:......:....:....:.:......:.......-.........x.x.x.x.x....x...:.. 13M1I36M1D29M 61/78 78.2% 79/94230402 0.0% 2/78 2.6% 137296859 52917696 +3013 chr4 + 190214555 187133154 187133153 187133272 119 CTTCTTTCCTTCTTTCTTTCTTTCTTTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTACCCTCCCTCCCTCCCTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 + 94230402 63697117 63697116 63697235 63697117 63697116 63697235 119 CTTTATTCCTCTCCTTTCCGGTGTTTTCTCTTTTTTTCCTCATTCTTCTATTTCGGTCTTTGTCTTGAGCCTTTACTTTTTCACAGTCTTTCTCTCCCCTCTTTTCTTTCTTCCTTTTT ...:x.....::::.:.::xx.x:...:.x...:....:.:x..::.:.x....xx.....x.:.:x.x...::x::::.:.x:xx.:::.::..:..:..:..:...:.......::. 119M 65/119 54.6% 119/94230402 0.0% 0/119 0.0% 123436037 66778518 +5104 chr4 + 190214555 187144843 187144842 187145034 192 ATGCAGTGTACACCTAAATTGTATTCAATCATGATTTACTACATAAATTTGATTAACTTAAATGCATGGTAAGCTCTTTCCTGTTAATATAAATGGAACAAATTAGTGTTCTAAATAGAATAGGAA---------AGACAGGAAGCAACGCAAATATTCCAGA---TTATCTGGGCTGTTTTTAAATGCTT--TTTTTCTTCTCTT chr4 + 94230402 63749433 63749432 63749634 63749433 63749432 63749634 202 ATGCATTGAAGAACTTAGTGGCTTTCACTAGCAATTCAGTACATCAGTTTGATTAAGTTAAATTTTAAGCATGCTACTTCTTGCTAATATAAATGGAGCAAATTACATCTGTAAATACAAGGGCAGCTACACTACAGACAAAATTCA----AAATATTTCATAGTTGTTTCTGCAGTGCACTTAAAAGGTTGATTTTTCTTTTCTT .....x..x.x.x..x.:.x.:x....x.x:::...:.x.....x.:.........x......x:xx:.:.x...x:...:..:.............:.......xxx:.x......x..x:.x.:---------.....::.xx..----.......:..x.---x.x....x:x..:x:.....x.x..--........:.... 126M9I12M4D12M3I25M2I13M 130/188 69.1% 202/94230402 0.0% 18/188 9.6% 123395410 66819145 +4198 chr4 + 190214555 187168857 187168856 187168957 101 CACGGTGGTGGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGTAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033197 76033196 76033289 76033197 76033196 76033289 93 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ...:......x...--....:.:...........::........x.xx.x...x::...........:..x:xx:..:.....------..x...:..... 14M2D67M6D12M 71/93 76.3% 93/94230402 0.0% 8/93 8.6% 111135660 79078895 +3517 chr4 + 190214555 187169461 187169460 187169592 132 TATTATATATAATATAC---ATATTATATATAATATGTATATTATATAATATATAAAT---TATATATTATATATAATATATATAATATATAGTATATATAATATATATAATATATATTATATATTATATATATATAT chr4 + 94230402 63976862 63976861 63976995 63976862 63976861 63976995 134 TATTACATACTTTATCCTTTATAGCAAATGCAG-ATGTATAA-ACATAAGATAAAGACATACATATGTAATATGCCATGCATATATTGTATGGTATTTATAATATATAC--TACATATTTTACAATATACATGTAAAT .....:...:xx...x.---...x:.x..::.:-.......x-.:....x...x.:.:---:....:.x....::x..::.....x.:...:....x...........:--..:.....x..:.x....:..:..x.. 17M3I13M1D8M1D15M3I48M2D27M 91/128 71.1% 134/94230402 0.0% 10/128 7.8% 123192599 67021956 +3562 chr4 + 190214555 187169506 187169505 187169589 84 ATATATAAATTATATATTATATATAATATATATAATATATAGTATATATAATATAT---ATAATATATATTATATATTATATATATA chr4 + 94230402 26320260 26320259 26320341 26320260 26320259 26320341 82 ATGTATATACTACATATTATATATACTATATACAATA-----TATTTATTATGTATCTAATAGTATATTTTTAGTATTGTATATGTA ..:....x.:..:............x......:....-----...x...x..:...---...:.....x..xx:....:.....:.. 37M5D14M3I28M 63/79 79.7% 82/94230402 0.0% 8/79 10.1% 160849246 29365309 +3363 chr4 + 190214555 187169523 187169522 187169589 67 TATATATAATATATATAATATATAGTATATATAATATATATAATATATATTATATATTATATATATA chr4 + 94230402 26320261 26320260 26320327 26320261 26320260 26320327 67 TGTATATACTACATATTATATATACTATATACAATATATTTATTATGTATCTAATAGTATATTTTTA .:......x..:....x.......x......:.......x..x...:...:xx...x.....x.x.. 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 160849262 29365293 +3264 chr4 + 190214555 187211355 187211354 187211427 73 GTGCACCTATAGTCCCAGCTACTCAGGAGTCTGAGGTGAGAGAATCTCTTGAGCCCAAGAGTTCAAGGCTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ......x.:....:.........::::..x.....x:xx.x...x.x.....:....::..:.:x:.....:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 111178151 79036404 +3122 chr4 + 190214555 187215245 187215244 187215309 65 CCTTCTCCTCCTCTCCATCTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTCTGAGATGGAGTCTTG chr4 + 94230402 72001428 72001427 72001492 72001428 72001427 72001492 65 CCTTCCCTTCTACTCCCTGTTTTTTTTTCTCTCTCTTTTTTTTTTTCTCCTTCTATAGAGCACTG .....:.:..:x....x.x.:...:.....:...:...........:.:..xxx..:...:x:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 115213817 75000738 +3588 chr4 + 190214555 187225895 187225894 187225973 79 GTGGTACCTGCCTGTAGTACCAGCTACTTGGGAGGCTGAGGCGTGAGAATCGCTTGAACCTGGGAGGTAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....:.x:.--......x...........::........x.x..x...x.:........::.:..x.xx:..:..:.. 10M2D67M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 111192694 79021861 +3171 chr4 + 190214555 187241480 187241479 187241530 51 GGGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTAATCT chr4 + 94230402 39858772 39858771 39858822 39858772 39858771 39858822 51 GGAAAGCTCTGTCTGAAAAAAAAAAAAAACAACAAAACAAAAATCTTATTT ..:.::........x..............x..x....x........x..:. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 147382708 42831847 +3584 chr4 + 190214555 187281482 187281481 187281553 72 GCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.:...........::........x.xx.x...x.........:.:.:..x.xx:..:..:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 111248276 78966279 +3042 chr4 + 190214555 187281612 187281611 187281662 51 AAAAAAAAAAAACAACAACAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAT chr4 + 94230402 4792651 4792650 4792701 4792651 4792650 4792701 51 AAAAAAAAAAAACAACAACAAAAAACAACACAGAAGAGAAAGGTAATAAAT .........................x..x.x.:..:....:::x..x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 182488961 7725594 +3009 chr4 + 190214555 187281615 187281614 187281677 63 AAAAAAAAACAACAACAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAATTGTCTTTATAGGTTT chr4 + 94230402 12785740 12785739 12785802 12785740 12785739 12785802 63 AAAAAACAACAACAACAAAAAGAAACAAACAAAATAACAACAAAAAACCACCTTGGAAAGTCT ......x..............:...x...x....x..x..x..:...::::...x:x.:..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 174495875 15718680 +3440 chr4 + 190214555 187282237 187282236 187282334 98 GTGCACCTGTGGTCCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCACCTGAGCCCAGGAGGCCAAGGTTGC----CATGA----ATGCTAATGCATGCC---AGCCTG chr4 + 94230402 76033204 76033203 76033312 76033204 76033203 76033312 109 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTG ......x...:..:........:..::........x:xx.x.:.x...:...:.....:..x::x:..:..:----.....----.x..x:...::....---...... 72M4I5M4I15M3I6M 70/98 71.4% 109/94230402 0.0% 11/98 11.2% 111249033 78965522 +15545 chr4 + 190214555 187283184 187283183 187283937 754 ATATATATATTTCCATTCT--AAATGTGCAGTGCTCTGTAACTGAACCCACATCTTGGCTCAATGCCCAGTGGAAATTTCAGGAACAAGGGACAGTGTGTC--TCAGTCCATTGTTTCAAATAACTCTCCTTGGCTTCTTTAGGGGGATGAAACAGGCATTCACATTA---GGCCAGAAGGTTATTAGATCTCCACGAGATGCTGCCCAGGTCTGGCTGCACACCGTGAATATTATTCTGTCAACGCAAATGTCCTTAGAATCTGCTAGAATTGAATGACTCTTAGCAGCTTTACAGCTGTCTTACAACATTTGACATCTCCCAAAAAACGC---TTCTTGGCACCAATGAGAATTAGTCACTGGGCTGATTTATATCTAAAAAGTATGGAAAATGAAGTGGGATAACAGTATCACTGTTTCCATGTATCATGTTTATAAAATAAGTATTGTGTTTTCCCCCC-GAAGGCTGGGATTGATTTT--------TTACGCCACCCACAGCCATCC-----CCCAACTTTTATAGCCCGGGCAACTATAAATAAGTT-TAGGAAAATTACTCCTCTACGGTTTCACAAAGCATTTCTTATCTGACTGCCACAGCTGTCACTGATCCAAATGCTCTTATTTGGGATGTCTACGGCTGGAAATATTATTGCTTATGTTCTTCAGGGGCTAAAGA---------------ACGTTATCATATTATTTTGTGAATT-TAATTCATTTCTCCTGTTTGTGTC-----AGGGGTTTTTAATGTCTAGTGATT--TCTCAAACATACCAAAAT chr4 + 94230402 63781047 63781046 63781812 63781047 63781046 63781812 766 ACATTCATATTTTCATACTTGAAATGTGCACTAGTTTTTTGC-AAAACTGCCTCCTGATGTATAACCCAGAGAGACCTTCAGAAATGGGCGACAGTGCATTGTTCACTCCCTAG----AAATAAATCATGTTTATTTCTTTAGAGGAACTAA-TAGTC--CCACCTTGACTGGCCAAAGGGCTACCAGATCTTTGGGAGATTTATTGAAGTTATAGTT------TATAAACACTTTTTGGATTAC-----TTTTCATAAGATATAGTA-AACAGAATTGCTTTTAGCAGCTGTACAGCTCCTTTATG---TTTGAAGCATAAGAAATAAATCAATTTTTTGATGTGCTTGAAAATTCTTCACtttattaattaatatataaaaaGTTTGAAAAATGAACTGGAATAAAGGTATCACTCTGACAGTTCAGAATGTT---------AATATTGAACTTTCTTCCCAGGATGCTGGGACTGATATTCCTGCCCCTCATGTCTCACCCAGCTCCCCACACCTCCATTTTTTATATAAGCGGTGACTATAAATTAGTTGCAGGAAAATTACTTCTTCACCATTTCACAATGCTTCTCTTATCTAGCAGGCACAGCTGTCACATAACGAAACGCTTTTATTTATGTTGTCTCTGGCTAGAAATATTAATGCTTATGTCTTTTAATGGTAAAAAAAAACCCACCAACAACACATTATTAAAGTACATTTTGAATTATAACTAGCTTTGTAATTTTTTGTCCTGTAAGAGG----TAAGGATTAATTATTTGTTTCCAATCAACCAAAAT .:..x:......:...x..--.........x.:x.:.x.x:.-:..x.::.x..:..::x:.xx:.....x.::.x:.....:..:::.x.......::.:--...x...x.x.----......x..x:x..x::........:..:.:x..-:..x.--:...x..:---.....:.:..:..::......:::x.....x:xx:xx..x.x.:.:.------::.:..:.:.x..:x.x:x..-----.x.:.x..::..x.:x..-..:x....x:..:.........x.......x::...::---.....x::x.xxx...x..xx.---..:...::::xxx...:....xx.....xx::.:...x....x........x..:........x...:....x:........x.xx.x:.x:.xx.....---------.:.....x::....::...-.:.x.......:....x..--------.:.:.:.x.x.x....:x:..-----:...x:.......xxxxx..::.........x....-:............:..::..x:........x..x.:........::.x.x............xx.x.x...:...:......:x.x.....x:....:.........x.........::..:.:x..:x...:.---------------..:....:.x.x..:x..x......-...:.x::..:x:xxx...x....-----..:..----...x.x:..:.x...--.:..x..:xx........ 19M2I21M1D58M2I11M4D34M1D5M2D8M3I47M6D21M5D18M1D38M3D22M3I100M9D19M1I19M8I21M5I36M1I134M15I25M1I24M5I5M4D15M2I18M 475/718 66.2% 766/94230402 0.0% 84/718 11.7% 123502137 66712418 +3895 chr4 + 190214555 187316600 187316599 187316838 239 GAAGAAAAGGAAAAATTCATGAAATATAAGTCTAAGGTGACTTTTTAAAAATT---GTATTTT--CTTTTTGGAAATAACAA------AGTCTATAATAAAATGTTTATGTAATTTT--AATTATAAGATTGTAAATAAAATGCATGCATATGAAATGCATTTATTACAACTTTTATACAATTTTGTGAAGCTAATCATATATATGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72529061 72529060 72529302 72529061 72529060 72529302 242 gaggaaaagaaaaaat-----aaaaCCAACCCCA--GAGGCTGATTAGAACCTCATTTATTCTAACCTTTTCATATTAACAGGCAGTCAGTCTGTGAAAGAAAAACCATACAATCTCTCAGGTCCCAAATTCTGATTCATACATATACATAT---ATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..:......:......-----...xx:..x:.:.--.x.:..xx...:..x:.---x....:.--.:....x:x.x.....:------.....:.:.x.:..x:x::..::...:.:--.:x.x:x.:...x.:.x.x.x.:::..:.....---..::....x.xxxxx.x.x....x.:...:x..:x..:.:....x:.:..x.:.xxxxx.x....:.:...................:......... 16M5D13M2D17M3I7M2I17M6I29M2I33M3D97M 146/229 63.8% 242/94230402 0.0% 23/229 10.0% 114787539 75427016 +3748 chr4 + 190214555 187316727 187316726 187316838 112 ATGCATGCATATGAAATGCATTTATTACAACTTT----TATACAATTTTGTGAAGCTAATCATATATATGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 + 94230402 72525615 72525614 72525729 72525615 72525614 72525729 115 ATTCATACATAT-ACATATATATATTTTTATATTCATGTATAAAGTTTCTTGGTGCCAGTCATTCACATCTATTACATTTTATACACGTGTGTGTGTGTGTGTGTACATATATATA ..x...:.....-.x..::..x....x:x.:x..----....x.:...:x..:x..:.:....x:.:..x.:.xxxxx.x....:.:...................:......... 12M1D21M4I78M 78/111 70.3% 115/94230402 0.0% 5/111 4.5% 114791112 75423443 +3090 chr4 + 190214555 187316801 187316800 187316862 62 TATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATACACCTCTGTCTTTATATA chr4 + 94230402 70094142 70094141 70094203 70094142 70094141 70094203 62 TGTAAATATGTGTGTTTGTTTGTTTGTATGTATATGTATATAAACAGTTCCATAAATATATA .:..x..........x...x...x.....:.....:......x...x:..::.xxx...... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 117222659 72991896 +3179 chr4 + 190214555 187325103 187325102 187325175 73 AGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAATAAA chr4 + 94230402 41112178 41112177 41112249 41112178 41112177 41112249 72 AGGAAAGGA-GAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAA .......:.-.....x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.......... 9M1D63M 55/72 76.4% 72/94230402 0.0% 1/72 1.4% 146212925 44001630 +3002 chr4 + 190214555 187350907 187350906 187350966 60 CGGAGCGAGACTTCGAAAAATCAAAAACAAAAACAAACAAACAAAAAACTTCAACAACTT chr4 + 94230402 21382919 21382918 21382978 21382919 21382918 21382978 60 CAAGGTGAAATTTTTAAAGACCAAGAAGGAAAATAAACAAACAAAAAACCTCCAAAGCTT .:::.:..:.:..:x...:.:...:..x:....:...............:..x.x.:... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 165967988 24246567 +3087 chr4 + 190214555 187360457 187360456 187360504 48 GGAAGGGGGAGGGAGGGAAGGAAGGAAGGAAAGAAAGAAAATAAAGAG chr4 + 94230402 73633586 73633585 73633633 73633586 73633585 73633633 48 GGGGGGGGGAGGGGGAAAAGGAAGGGAAAAAAAAAAAAAAAAAAAGAG ..::.........:.::........:.::...:...:....x...... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 113726871 76487684 +3783 chr4 + 190214555 187362284 187362283 187362366 83 CATGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAATCCAGCAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::......--...x......:.........:.::........x.xx.x...x........:....x..x:xx:..:..:.. 10M2D71M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 111329087 78885468 +4073 chr4 + 190214555 187381289 187381288 187381371 83 CATGGTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::..........--....:.:...........::........x.xx.x...x........:....:..x:xx:..:..:.. 14M2D67M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 111348092 78866463 +3551 chr4 + 190214555 187386521 187386520 187386621 101 AGTACAACCCACAAAATGGGAGAAAA-------TATTTGCAAATTAT-ATATAGAACTTTATACACACACACACACACACACACACACACACACGACTTGTATCTAGAA chr4 + 94230402 87227989 87227988 87228097 87227989 87227988 87228097 109 AGCACAATATACAAAATAAAGCAGAAGAATCACTGTTTGTAATACATCATATGCATGCTTGTACACACAAAAACACACACACAGCCACACACACTACTGGTAATTAGAA ..:....:x:.......::::x.:..-------.:....:..xx:..-....:x.xx:..:........x.x...........xx.........x...x...x:..... 26M7I14M1I61M 72/101 71.3% 109/94230402 0.0% 8/101 7.9% 100158532 90056023 +10040 chr4 + 190214555 187397576 187397575 187397998 423 GGTTTATTTTAATGTGCATTTTTTCAGTAAAACCTTACAGTAATAAAGATTTTGCTGTCATCTCATGAACAAATAAGTG--TATTACTTTACAGGCAAGAAAGGCAAACTAGAATAATG-ACCATAGCATCATTTATGGGTATATAGAAATTATGTCCT-------TTTTATAAAGGAGATCTTAATAAGCGGTTTGGGAAATTATATTACAAGCCATTCTGTATTGATTTATTATCTTCTAATGCTCATTTCTGCCATGCACTCAAAGCTCCAAAGCATTAAAATTGGTATCCACTGTAGTTTGATGCCAGTTCTGAAGTTCAAATGGCAAATAAATTCTCATATTAATGGTAATGGTGTGAAACTGAGAATTTATTGAAGTTATTTGTTAAACTTCAGTAGGTACCTATAGCTAGT-TTTCATGTGAAAAAA chr4 + 94230402 63826123 63826122 63826540 63826123 63826122 63826540 418 GGACTGTTATAATGTGTATCTGATCTACAAAATCT---------AAAATATTGGTAGCCATCATATGGAAAAAAAAGTAAAGATTAATCCTTGGATAACTAGGAAAGCCTAGAATTATTTATTACAGGATCAGTT-TGAGTGAAAAGAAAGTGCATCTCCCATATATTTCATAAAGCAGATTTTAATAACTGGTTTGGAAAATTACATTCCAGGGTGTTCTATATTGATTTATTAT-TTCTAATTCTGGTTTACATAGCACATACAGTGCTCCAGAAGTTTAAAATTGATAACAAATATAGCTGGGAAGCAACAATAGATTTTAGCTATTAAATAGATTCTTAGCCTAATGTAAA---TGTGAAACAGAAAATTTATAGGACTAAAATATTAAACCTTTGT--GTGCCTTTTGTGAATACTTCATATGATGAAA ..x:.:..x.......:..:.xx..x::....:..---------...:xx..x.:x.:....x:...:.x...x....:--x....x.::x::.::..xx.:.:x.:x.......x..x-.::.:..x....x..-..:..:x.x.....x.:::..::-------...:......x....:.......x:.......:......:...x..:.x::....:..............-.......x..x:...x:::x:::..:x..:x......:.:xx.........:..x.x.x.:...:.x.:x:x..::xx.::.x..:.:x.:x:.....:.....:.xx:.....xx..---........x..:.......x.:.x.x.xx.:......:.:x..--..:...x.x.:x.:.-:.....:...x:... 35M9D35M2I38M1I15M1D23M7I70M1D118M3D43M2D15M1I15M 264/407 64.9% 418/94230402 0.0% 27/407 6.6% 123571453 66643102 +3071 chr4 + 190214555 187409797 187409796 187409856 60 TATGTGAAATATATAGCTCTGATAGATATATGCACACACACATACACACATACATATATA chr4 + 94230402 28777182 28777181 28777241 28777182 28777181 28777241 60 TACGTAAACTCTACAGTTTTGAAATGTATGTGCATATAGACATATACACAGACATATATA ..:..:..x.x..:..:.:...x.x:...:....:.:.x.....:.....x......... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 158632615 31581940 +17680 chr4 + 190214555 187415326 187415325 187416295 970 GCATAAAAATGGAAATACTGATCCTGTGACAACACAGCCTGAATTTTCTGCTTTGCAGATGCCAGATTTATTTTTAAATGGTGTGAATCAAATCTGTGCTGAGAGGCCAACTTCAAAATATAAAAGAAAAATTGGCAATGGGAGGATTGTGCTGGTTTGGCTGAAATGAAGTGCTCTACGGCATTTCATTCTAGTGGAGCGTCTGACTGTGAAAATCCTTCCAATTGTAATTTTCTTTGGCTTGTCAAAAGAGGATTATGAACTAAAGTCAGTGTTGCAGGAAATGTCACCTGTCCTTT-GAAAGAAAATAATAAATCA-AAATGGCTT-TTGTTCATCATGTTTAAAATGAAAAAAAAAAAAAAGTTGATCCACTTGGAGTCTTCTCTCATTTCTTGACAAGGCAGTTAAATAAATAAA-----ACGGAATTTTTTGTAATTG--TTACTTCTTGC----TCATCTCAAAAGGGGAAAAGGGAAATCTTCATTCAATACATATTCATACAGAG-AAAATAGAAGAGCAGAGACAGAGACAGAAAGAG--AAATGAGA----TGAAGAGTGAAACAAG---ACCCTGGTAGAG--------TTCCTCAAGTCAGATGTTAAGAAAGGTATC----TTTAAATTA-TAATTTGTTTCTTTGATAGATACTATATTACAAATTCAAAAATGTGAGGTAAATAAAAACAAA--AGGAGT-----AGATAACTATTCCTGAAAAATTCTAAGTGCTTGTATATTTTGCTTTAAGCAAATAAAGACAAAATTACCAAACA--TATAACAGAGCTTGAAATTATCTGAATTCTTTTGCCTTGACAATTT--TTTTCAGTTATTTTA---------------------GCAATAAACATTGCCTGTGATGAGTACA---TACCACTTCAGAGAAAGAAAGTGATAT--TTCTGG-------CTTATCGTATGGACA-TCATGGCCATGCTGACA---CCATTTCTT-TAAAAAAGTAATTGTTAATGCTACTTTG-TATGTATTAATCTGAAAATATAGAAGAG chr4 + 94230402 63829111 63829110 63830086 63829111 63829110 63830086 976 GCATAAAAATGGAAATGCTGATATCTTGGCAACACAACA-AAGTTTTGTTCATTGCAGAAATTGGACTTGTTTTTAGATGGTGTGAATCAAATCTGTGCTGAGAGACCAACTTTAAAACCT-AAAGGAAAATTGTCAATGGGTGACTTTCACTGATTTGGCTAAAGTGAATCTATTTGCAG-GTTTCATCCTAGTAGAGTGTCTAACAG---AATTTTTTCAAATTCAAAATCTCTTTGGCTTGCCAAAAAGGGATTATGAACTGAAGTCAGTGTTTCGGGAAATATTGCCTAACCTTCAGAAAACTAAAAATAAATTATAAAAAACTCGTTGCTCATC----TAAAAAAGTGAAGCATACAACAGT-------------------TCCTATTTTTTATATAATAAGCTAAGTAAATAAAGTATGATATACTTCATTGTAATTATTTTATTTTCTGCTGGATTAGCTTGTAAGAAAA-----------------CAGAATGTGTTCACAAAGAACGAGACATGAAAGCAG-------GGCAAAAGGAACCAAATTATAATTTTGGAGTTTGTAGGTAGCTTATTGTGATAGAGATTGCAGTTTAGTGTAGCAGGACTTTCTAAAGGAGATCAAGGTtttgtttatttatttatttatttaGTA---ATTTTGCTCCAA----AGAAACATCAAG-AAACAATAACAAGGCAGAACTTGGAAAAATAAACATTCTC---AGATTCT--GTATTAATGCATTGTATTTTAAATAAATGGAAGCTAGAGTATGAAACAAGCACAGCAGAG---------------ATGCTTTGTGCCTGCTTATTTGCTCTTCTCCTATTTTAATCATCTCTCGAGAGACAAAGGCAATAAATACTCTCTGTGATGAGAACATTTTATCACACCATTGAATGAAAGTTATTTCCCCCTGGGACACTCCTTGCCTTGTGGGTATTTATGAGTATGGTGATAATGTCACTTCTTCTGGCAAAATTACGATTAATTATGTATAGTTGTTTGTTATTCTAAAAAGACCAGGGAG ................:.....x::x..:.......:.x-:.:....x.x.x.......x::::..:..:......:............................:.......:....:x.-....:.......x.......x.:x..x::...:.......:..:....x:xx.:.:.:.-:......:.....:...:....:..x.---..x.::...x....xx..x.:...........:.....::............:...........x.:......:.::...:x....:-....:xx..x.......:.-...x::..:-...:.....----.x....x.x:..:x.x.x..x...-------------------..::....:..:xxx.:xx..:...:........-----.::x.x..:x........:--...:..::...----.:.x..::x...:::.-----------------..:x.::.:....:.x...:-:.:.:.x:.:.....-------.:..:..:..:--....x.x.----..:..xx..x.:xx..---.::x..:.....--------..xx.xx..:x:..:x..xx:..:.:x...----...x:x...-.x....:...x...::..---.:.x.::.x...----.:...::.x.:.-...:..x.....:--..:.x.-----.:....x:....::---.:.....--..::.x:.::...x.::.....::....::.::.x.:.x..:x.....--:.:.:.....---------------..x....xxx.:..x:x....--.:...xx:.......---------------------........:.:.x:..........x...---..:...x:..xx...x......x..x.--::....-------...::.x.:...::.-.:...:x:...x...:.---:..:.....-.::x...:.x.:x:.....xx.::x.x.-.:.x.:...x...:....x.:x:::... 39M1D81M1D59M1D27M3D87M1I19M1I9M1I9M4D24M19D34M5I19M2I11M4I16M17D20M1I15M7D11M2I8M4I16M3I12M8I30M4I9M1I18M3D12M4D12M1D13M2I6M5I14M3D7M2D48M2I10M15D21M2I15M21I28M3I27M2I6M7I15M1I17M3I9M1I28M1I28M 607/889 68.3% 976/94230402 0.0% 168/889 18.9% 123586215 66628340 +3333 chr4 + 190214555 187427317 187427316 187427517 201 ACAGGGACAGAGTACTGTGGTGGTTTTTGTTGAATAAAACCTGAGAATCTACTTCCTAAGATTCTACTGTAGAGATGTATATCTGTGTACG------TGTGTGTGTATATATGTATGTGTAAAATTATAAATAATTTGTGTGTGTGTGTATGTATACACATATATATATATGTATACATACACACACACATTCAGAGACACTTGTCT chr4 + 94230402 13482428 13482427 13482613 13482428 13482427 13482613 186 ACATGGATAGAGTTA------GGTTTTTGTCTCATAGAG-------ATCT-CATCCTACGTATCTTTT----ACATACGTATCTACACACAGCTCTTTACATTGGTACACATATACGTGATGGATTGGGAATGCTATGTGTGTGTATGTATGTAT--AGTTGCGTATGTATGCATAGCTATACACATGCTTGCAG-TACAGTTATCT ...x...:.....xx------.........:xx...:.:-------....-.x.....x.xx...x:.----.x..:::.....::::..:------.:::.xx...:.:..:..:...xx::...:x:...:x.x.........:.........--.xx.:::...:....:...xx..:.....::.x.x...-x...x..:... 15M6D18M7D4M1D17M4D19M6I58M2D38M1D11M 119/180 66.1% 186/94230402 0.0% 27/180 15.0% 173944889 16269666 +3347 chr4 + 190214555 187427377 187427376 187427496 120 ATTCTACTGTAGAGATGTATATCTGTGTACGTGTGTGTGTATATATGTATGT--------------GTAAAATTATAAA--TAATTT-----------GTGTGTGTGTGTATGTATACACATATATATATATGTATACATACACACA chr4 + 94230402 68837002 68837001 68837143 68837002 68837001 68837143 142 ATTTTGCTGTGGATAGTTACA-----GTTCATGTGtatatacatacatacatacctacacacacacGCAAGGCCAGGAAATTAAGTTCTGGTAAGAACGTGTGCGTGTGTGTGTGTACACACAAATACATACATACACATGCACACA ...:.:....:..x.xx..:.-----..x.:.....:.:..:...::..::.--------------.:..::::.x:..--...x..-----------.....:......:...:......:.x...:...::..:....:...... 21M5D26M14I13M2I6M11I49M 81/115 70.4% 142/94230402 0.0% 32/115 27.8% 118590375 71624180 +3584 chr4 + 190214555 187427428 187427427 187427549 122 TGTAAAATTATAAATAATTTGTGTGTGTGTGTATGTATACACATATATATATATGTATACATACACACACACATTCAGAGACACTTGTCTTTATTCTATCACTACATGAAAAAACATTTTTA chr4 + 94230402 23247698 23247697 23247805 23247698 23247697 23247805 108 TGAACAATCCAAGATGACTTGACCATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT--------------TACATGAATAAATATATATA ..x.x...:xx.:..:.:...xx::..........:.:......x...:x.:..:.:....:...:.......:x..::..x.xxx..--------------........x...:..x.x.. 88M14D20M 74/108 68.5% 108/94230402 0.0% 14/108 13.0% 164179730 26034825 +3137 chr4 + 190214555 187427442 187427441 187427508 67 TAATTTGTGTGTGTGTGTATGTATACACATATATATATATGTATACATACACACACACATTCAGAGA chr4 + 94230402 27759103 27759102 27759169 27759103 27759102 27759169 67 TAGTTTTACCATATGTATTTACAAACACATATGTGTATATGCATGTATACACGCACACAGTAAGAGA ..:...xxx::.:...:.x.::.x........:.:......:..::......:......x.x..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 159668339 30546216 +3255 chr4 + 190214555 187427699 187427698 187427768 70 CATGGTGGCGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACTTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.--...x......:.........::::........x.xx.x...x.........:::.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 111394502 78820053 +3473 chr4 + 190214555 187437640 187437639 187437753 114 TGCAATAATTCAATGA-ATTCTTTCTGCTTGTTGCACAGAC--AAAACAAATTCACTG---AGATGGTGACACTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGT chr4 + 94230402 75331780 75331779 75331899 75331780 75331779 75331899 120 TACAACAAATTACCGACATTTCCTTTCTTTTCTGAACAGACTGAAAAGAGAGGCATCGGCCAGTTGGAGAAACAGCAGTTAAAAAAAAGAAAAGAAAAAGAAAAAACAATGAAAGAGTGT .:...:..x.:.x:..-...:::.:.x:..x:..x......--....x.:.xx..::.---..x...x..x..x.....x........:....:.....:......x..x:...:.:x.. 16M1I24M2I15M3I59M 79/114 69.3% 120/94230402 0.0% 6/114 5.3% 112105860 78108695 +3137 chr4 + 190214555 187487314 187487313 187487396 83 CATGGTGGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAAGCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....::...:--......:.........::::........x.xx.x...x.x......x.::.:..x.xx:..:..:.. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 111454117 78760438 +3322 chr4 + 190214555 187504056 187504055 187504151 96 TCTTCTCTCTTTCCCCTCTCCTCCTCTCTCTTCTTCTGTTCTTTTTTATCTCTTTCTTCCTCCTCCTCTACCTCTCCTTCTTTTTCTTTTTTCTCC chr4 + 94230402 38895905 38895904 38896000 38895905 38895904 38896000 96 TCACCTCTCTTTTCCCTCATGCCCCATTTTTTTTTTCCTTTCTGTATCTTCCTTCCTTCCTTATATATTACTTCTCCCTCCTCTTCTGGTTACTCC ..x:........:.....x:x:..:x.:.:..:..::x..::.x.x.x.::...:......:x.x:x:...:.....:..:.:....xx..x.... 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 148608151 41606404 +3003 chr4 + 190214555 187512789 187512788 187512841 53 ATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 + 94230402 23247722 23247721 23247774 23247722 23247721 23247774 53 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACA ..:.:.:...::.:.:.:..x...:x.:....:........:........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 164265067 25949488 +3124 chr4 + 190214555 187512802 187512801 187512847 46 TATATATATATATATATATATACACACACACACACACACATATTTC chr4 + 94230402 4409082 4409081 4409127 4409082 4409081 4409127 46 TGTACATATATATATATATACACACACAGAGACACACACATTTTCC .:..:...............:.......x.x..........x..:. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 183103720 7110835 +3316 chr4 + 190214555 187512804 187512803 187512861 58 TATATATATATATATATATACACACACACACACACACATATTTCATTCAATTGAACAA chr4 + 94230402 4409082 4409081 4409139 4409082 4409081 4409139 58 TGTACATATATATATATATACACACACAGAGACACACACATTTTCCCCAGCAGAAGAA .:..:.......................x.x.......:....:x::..::x...x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 183103722 7110833 +3075 chr4 + 190214555 187517276 187517275 187517352 77 TATATATATACACACATATATATATGAAAAGAATAAAAATATATAGAAATATACTTTATATATTTTTATTCTTTTCA chr4 + 94230402 68205540 68205539 68205613 68205540 68205539 68205613 74 TGCATATATACACACATATATATAATGGGAGAGCATACATGTGTATAGATAATCTTAAGACATTT---TTCTTTTCA .::.....................xx:::...::.x.x..:.:..x.:...xx...x.x.:....---......... 65M3D9M 54/74 73.0% 74/94230402 0.0% 3/74 4.1% 119311736 70902819 +3056 chr4 + 190214555 187523674 187523673 187523756 83 CATGATGGTGGGTGCCTGAAATCCCAGCTACTTGGGAGGCTGAGATGGGAGAATCACTTGAACCTGGGAGATGGTGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:::.....x::.--..x.:.:...........::........x:xx.x...x..........::.:..x.xxx..:...:. 14M2D67M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 111490477 78724078 +3039 chr4 + 190214555 187528317 187528316 187528389 73 CATGCTTTGCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTAATTGAGACAGTCTCATTCTGTTGCCCAGG chr4 + 94230402 18684719 18684718 18684788 18684719 18684718 18684788 70 CATATGTTGCCATCCTTCCTCTCTCTCTCTTTTTTTTTTTTTTAATCTCTACAGTT---TTCCATTAGTCAGG ...::x....:x.:...::...:...:...................:xxx.....:---...::..:x:.... 56M3D14M 50/70 71.4% 70/94230402 0.0% 3/70 4.3% 168843598 21370957 +7546 chr4 + 190214555 187540324 187540323 187540600 277 TAATCATTTTCTAATTTCAAGGTTCCTATTCTTTTAGTCATTTAAAATTCAGACTTCAAGCCAATCTATGAATGCCAGGTTTCTGTTAATTACAAACAATTCATCTTAATTAGCCTGAAAGATGGTTCTAACAAGAAATAAATTATTGAGCACAAAAAGCAAGTTTTATGACATGTTTAATGTTCATTTCAAATCCCTTTCAAAACAAATAG-CAGTGGAGAACGTGGAGGGTTAGAAAGATAACTTTTGTTGCTGGATTGATTTCAAATCTTCCCTG chr4 + 94230402 63864740 63864739 63865000 63864740 63864739 63865000 261 TAACATTTATCTGATTGTGATTCCTGTGTTCTTTGCACACATTAAAATTCAG------------TCTACAAATGCCAGGTTTCAATTAATTAGAAACAGTTTATCTTAAATAGTATGAATTACCATCCTAACAAGAAATAAATTGT--ATCAACACAGGTGAGTTTTTTGAAATG-TTAATGGCCATCTAAAGCCTTTTTTGAAACTAAGGGACAGCTGGTAAT-TGAAGGTAGAAGAAACTATTTTTTGTTGCT-TATTTATTCCAAACTTTTTTTG ...:xx..x...:...x::.xx:::x.:......xx::xxx...........------------....::.............x:.......x.....:..:.......x...:x....xx.:x:.:.................:.--.x..xx.x.:.::......x...x...-......x:...:.x..::.::...::....x..x:.-...:x.:x..:-..:...xxx.::..:x..x:..........-x...x...:....::..:::.. 52M12D82M2D27M1D36M1I11M1D30M1D22M 176/260 67.7% 261/94230402 0.0% 18/260 6.9% 123675584 66538971 +3196 chr4 + 190214555 187542324 187542323 187542386 63 CATGCTTAACAATCAATGAAAGCTACTTACAACAACAACAAACAAACAAACAAACAAACAAAA chr4 + 94230402 64478685 64478684 64478747 64478685 64478684 64478747 63 CATGCCTGGTACTTGATGAAAGGGATTTAAAACAAAAACAAACAAACAAACAGCAAAAAAAAA .....:.:::.x.::.......xx.:...x.....x................:xx...x.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 123063639 67150916 +3578 chr4 + 190214555 187544023 187544022 187544165 143 CTGTTAGCATTTTG--GTATAATTTT-------CCCAGCATTTTTTCCTGGCTGCATTTTTTTACATTCTCTCTCTCGCATATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTATATATATATGTGTGTGTATATATATATG chr4 + 94230402 85834465 85834464 85834616 85834465 85834464 85834616 152 CTGTTGACTTTCTGTGATACAGCTTTATTAATACCTACCTTATTTGCCAGAATGTAGTTTGGGTTTTTTATTCATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACATG .....::.x..:..--:..:.::...-------..:.x.x.x...x..x.:x..:.x...xxxx:x..:x:..x:.:.::.x...................xx..:..x::...:....:.:x...:..:.x.:..:::::...:.:.:... 14M2I10M7I119M 88/143 61.5% 152/94230402 0.0% 9/143 6.3% 101709558 88504997 +3387 chr4 + 190214555 187544092 187544091 187544168 77 CATATGTGTGTGTGTGTGTGTATATATAT--ATATATATATATATGTATATATATATGTGTGTGTATATATATATGTAT chr4 + 94230402 85834537 85834536 85834615 85834537 85834536 85834615 79 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACACAT ...x.....x...........:.:.:...--..:..x::...:..:.:..x...:....x.:..:.:.:...:.:::.. 29M2I48M 54/77 70.1% 79/94230402 0.0% 2/77 2.6% 101709555 88505000 +8647 chr4 + 190214555 187547399 187547398 187547796 398 AGCAAAAAATCCCAGCATCCCCTCCACCTCTACGGTGTGATTTCTTAATGCTGTACTTGGCTCGACAAAGGAAGTCTGATATTTCAGAGGTGAGTTGCAAAGTGGCCAAACCACTCTTTAATGCACTATAGCTTGACATAATATTTGCTGCCAGCTTCTCGTTTAAAAATGCCATCAGTTTAACATTAACTGAAAAAG----------------------TAATTATTCTCCAGTTTCACGGAGCTATTAAGAAAAAAA--AAGTTCATTGAAACTCCAGGAAATGAAATACTGTGCTTTCAGGACCTATTGGAAGCCTTTCAACATTCAGAGCAGAAAAACATAAATTTATTTTTTAAGAAGCAGATTTAGGAACTTTAGTGAA-TGGGAACAGAAAGCATT--AACTTAAGCCTCAGGGGAGA chr4 + 94230402 63871318 63871317 63871727 63871318 63871317 63871727 410 AGTCAGGAATCCCAGTCTCATCAC-------ACATTGGAATTTTCTAATGTTATACTTGGCACTGCTAAGGGAGCTTAATGCAGCGGAGGTAATCTGCATACTAGCCAAACTGCTCTTCAATGCATCAGCAGCTGACACAGTTCACTCCATTGGAGTTTAGTTTTAAAATACCATCAA-TTAAAATCAGGAGGAAGGGGGGGGGACAGGATGACAGAACTTAATTACTCTCAAGTTTTGCTATGCTTCTGAGGCACAGATTAAGATTTTTTGAGCTGCAGGAGGCGAGACATTGTTTTTTAATGACCTTTTGGAAAAAATGCAGTTTGCAAAGCAAGGAAAC--AAATTAATTTTTGAA-----AGATATGTGGGCCCCAGGGACTTGGAAACAAAGAGAAGTGAAGTATAAGCCACTGGAAAAA ..:x.::........:x..x:.x.-------..:x..x:....::.....:.:........x.x:.x....:..::.:..::xx.:.....:.x:....x.x.:.......::.....:......::.xx:x:.....:.:.x:x:x.:::::.xx.:.x....x.....:......:-....x..:.:xx.:..::.----------------------......:....x.....::.x:x...x:.:..:x.x.:.--...x.:x..x:.:..x.....:::..:.:.:...x:...x.x.....x......:xxx.x..::x.x..:....:::....--.....x......x..-----....x.:x.::.:::..x..x-...:....:.:..x.x.--.::x......x.x..::.:. 24M7D147M1D19M22I39M2I81M2D15M5D21M1I17M2I20M 240/383 62.7% 410/94230402 0.0% 42/383 11.0% 123676081 66538474 +3016 chr4 + 190214555 187554068 187554067 187554105 38 TTTGTTGTTGTTGCTGTGGTTTTGTTTGTTTGTTTGTT chr4 + 94230402 56244316 56244315 56244353 56244316 56244315 56244353 38 TTTTTTGTTGTTGCTGTTGTTTTGTTTGTTTGCTTGTT ...x.............x..............:..... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 131309752 58904803 +3641 chr4 + 190214555 187567866 187567865 187567946 81 AAAAAAATAGGCATGGTGGTGGGCACCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033186 76033185 76033264 76033186 76033185 76033264 79 AAAGGATGATACACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.xx.x:..::......--...x......:.......:...::........x.xx.x...x::...........:.. 21M2D58M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% 111534680 78679875 +3025 chr4 + 190214555 187580778 187580777 187580853 76 AGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .....:.:..:...x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:....x:..:.:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 146468600 43745955 +3036 chr4 + 190214555 187580786 187580785 187580861 76 AGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAAAGAG chr4 + 94230402 41112178 41112177 41112253 41112178 41112177 41112253 76 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAG .....:.:......x..x...x...x....x.:..:..xx.x.:.x..........::.x.x.:..::x:..:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 146468608 43745947 +3096 chr4 + 190214555 187580798 187580797 187580875 78 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAAAGAGAGAAAGAAAGAGGA chr4 + 94230402 41112178 41112177 41112255 41112178 41112177 41112255 78 AGGAAAGGAGAAAGCAACAAACAAACAAAGCAGGAGAGTCACAGATAAAGAAAGAAGAACACAGAGAATAAAGGAGGA ..:..:::......x..x...x...x....x.:..:..xx.x.:.x........::::.x.x......x:..:..... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 146468620 43745935 +3195 chr4 + 190214555 187602422 187602421 187602480 59 AATTTCTAATGATTAATGTTATTACCATGAACACCAAAGGAAGTGATAATAATTTGCCA chr4 + 94230402 9367003 9367002 9367061 9367003 9367002 9367061 59 AATTTGCCATGATCAATCCTATTATAATAAATACCTAAAGAAGTAATAAAAATTTGCCA .....x:x.....:...x:.....:x..:..:...x..:.....:....x......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 178235419 11979136 +3013 chr4 + 190214555 187604028 187604027 187604112 85 TCCCCTCCCCTCTCCCCCCCTTCCTCCCCTCCCTTCTCCTCTCCTCCCCTCCCCTCTCCTCCTCCCCTC-CCCTCTGCTCTCCTCC chr4 + 94230402 11126206 11126205 11126290 11126206 11126205 11126290 85 TTCCTCCTACTCTTCTCCCCTTCGTCCCCATCCTCCTCCG-GCTGCCCCTGCTCTGCAGTGCTCCCCTTGCCCCCTGCCTTCCTCC .:..::.:x....:.:.......x.....x:...:....x-x.:x.....x.:..x:xx.x.......:-...:....::...... 40M1D28M1I16M 58/84 69.0% 85/94230402 0.0% 2/84 2.4% 176477822 13736733 +3144 chr4 + 190214555 187604061 187604060 187604111 51 TTCTCCTCTCCTCCCCTCCCCTCTCCTCCTCCCCTCCCCTCTGCTCTCCTC chr4 + 94230402 58890521 58890520 58890571 58890521 58890520 58890571 51 TTTTCTCTTCCTCCCTTTCCCCCTCCTCCTCTCCACCACTTTGCTCACCTC ..:..:::.......:.:...:.........:..x..x..:.....x.... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 128713540 61501015 +3622 chr4 + 190214555 187608780 187608779 187608863 84 ACATGGTGGCATACACCTCTATTCCCAGCTACTTGAGAGGCTGAGGCAGGACGATCACTTGATCCCAGGAGTTTGAGGCTACAG chr4 + 94230402 76033196 76033195 76033277 76033196 76033195 76033277 82 ACACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::....--.:...x.x..x.:............:........x.xx.xx:.x.......x.....:..:..x:....::.. 9M2D73M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 111575584 78638971 +3090 chr4 + 190214555 187608901 187608900 187608969 69 GCAGACTGAGACACTGTACAGAAAAAAAAAAAAGAAAAAAAGAAAAAAGAAAAGAAAAAGGAAGATATT chr4 + 94230402 55856581 55856580 55856644 55856581 55856580 55856644 64 GCAAACTAA-----TGCACAGAGGATAGCAGAAGAAAATGAGAAAAAAGAAAACAAGAAAGAAGATTTT ...:...:.-----..:.....::.x.:x.:.......x:.............x..:..:......x.. 9M5D55M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% 131752320 58462235 +3482 chr4 + 190214555 187643792 187643791 187643868 77 GTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGTAGGAGAATCACTTGAACCTGGAAGGCAGAGGTTGT chr4 + 94230402 76033201 76033200 76033275 76033201 76033200 76033275 75 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGT ........:.--....:.:...........::...:....x:xx.x...x..........::....x:xx:..:... 10M2D65M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 111610591 78603964 +3425 chr4 + 190214555 187652153 187652152 187652235 83 CGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGTGGAGCTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::......x:..--......:...........::........x.xx.x...xx:...........:..x.xx:.x:..:.. 14M2D67M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 111618956 78595599 +7918 chr4 + 190214555 187656975 187656974 187657181 207 GCACAATTTCCCTACAATAAATTGTCAAGCTTCATCTGGTCATCCCTATAAACTCAATATACT------CTAAGCAGGTTGTTAAGTACATTCAAGGATTTCACAATGAACAGCTGAGATCCAGTTATCATTAAAATGAAGTGCTGACACTGGAATAAAGCCACAAGAAAGTGTTTACTGCTACTGCTGCTCTGGAATTATAATCATTTCTTT chr4 + 94230402 63909050 63909049 63909258 63909050 63909049 63909258 209 GTACAGTTTTGC-ATAATACACTTATCTGTTTCATTTGGCTGTTCCCGTGACTTCAGTACACTGCAAGCATAAACAGGTTGTTAAGTACATTTAAAGATTTTAGAATGAACATCAGAGCTACAGTTATCATT-AAATGAAGGGCTGATATTGGAGTCATGCCACACAAAAATGTTTACT--CAGCACTGAAATGGTATTTCAATTTTTTCCTT .:...:...:x.-.:....x.:.xx:xx.:.....:...:::.:..::.:.x:...:..:...------x...:..................:..:.....:.x........x.x...x.x...........-........x.....:.:....:.x.x......x:...:........--:.x::...xxx...x...x:...:x....:.. 12M1D50M6I63M1D46M2D32M 146/203 71.9% 209/94230402 0.0% 10/203 4.9% 123747925 66466630 +3097 chr4 + 190214555 187685100 187685099 187685174 75 AACTTTTGTTCTTCCTCTCCTCCTTCCTTCCTTTCTTTCCTTCCTTCTTTTTCTTTCTTTATCCCTTCCTTTTTT chr4 + 94230402 86518995 86518994 86519069 86518995 86518994 86519069 75 AGTTTCTTCCCTCCCTCTCTTATTTCAGTTTTTTCTTTTTTTTTTTCTTTTTCTGCTTTTAGCCCCTAATTTTCT .::..:.x::..:......:.x:...xx.::.......::..::..........x::....x...:.xx....:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 101166105 89048450 +3374 chr4 + 190214555 187685166 187685165 187685244 79 TCCTTTTTTCCCTTCTTACTCTCTTTCTTTCTTTCCTTCCTCCCTCCCTCTCTCTTTCCTTCC--TCCCTCCCTCTCTCCT chr4 + 94230402 14674420 14674419 14674500 14674420 14674419 14674500 81 TTCTTTCTTACATTCTAAAGCACTTTTTTTTTTTCTTTTCTCTCTCCCTCTCCCTGCCCCCCCATTCCCTCAATTTTTCTT .:....:..x.x....x.xx.x....:...:....:..:...:.........:..x:..::..--......xx.:.:..:. 63M2I16M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 173010746 17203809 +3336 chr4 + 190214555 187687128 187687127 187687178 51 TCTACAGTCTTTTTTTAAAAGAAAACAACAACAACAACAAAACAAAAAAAA chr4 + 94230402 60379517 60379516 60379567 60379517 60379516 60379567 51 TCTGTGATCTTCTTTGAAGGGAAAACAACAACAACAACAACACAGAAAAAA ...::::....:...x..::....................x...:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 127307611 62906944 +10478 chr4 + 190214555 187717543 187717542 187717966 424 TTCCTCCCTAACATAATG----GTGAAATACAAACTTTACCAGGTCGATTTTTGTTATGCGGGAAACCAGTGTTTCTGCAAGATAAAAATGAGGAACTAATTGTTTATATTAGAGCCTTAAGACTGATGCTATTTTATATGCAAATTTACTAGAGCAATTTGTTTTACATGTGTATTACGTCAAATGAATCAAATTGTCTGAATGGGTGAAACTACGAATATAGACCATTTCATTCTATTTGAAAATAATTTGCAATTCCGCATTT-TATACAAATCTAATTGAAATATAATC-ATGCCTCCGTAAAACAGTGATAAACTTAATATATGAGAACAGTTGTTATGTGCCAATAAAATA-TCAAAACCAAGCAAATTATAG---AATAGTTATC-----AGGATGACTGTAAAATAACATAACTAGCTCTAAAGC-TGAGTC chr4 + 94230402 63943391 63943390 63943814 63943391 63943390 63943814 424 TTTCTCACTTGTACAATGCATATTGAACTATAAGGTTGCCAAAATAG---CTTGTTATGCGG-AGCCCTGTGCTACCAGAAGATAAAAACACTGAACTATTTTTTT-TGTTAGGCCTGCAGGCCCTGCAGCATTTTATATGCAAATGTACTCAGGC--------TCACATGCGTGTTAAGTCAAATCAATGAAATTATCACTGTAGAATGAATTGAAAAGATAGACCATTCCTTTTAATTTGAAAAGGATTTGCAATTCAGCATTTCCATAGAAAGCTAATTGAAATGCACTTAACACTGCTGAAAAGCAGTGATAAATTTGTGGAATGCACACAGTTATTTTTAGCTGTCAGAATACTTAATATCA--TAAGCTGTAGATAAATAATTAACCAGCTAGAATGACTGAAAACGCATA-AACTAACTTAAGAGTATGAGTC ..:...x..x::.:....----x....x..:..:x..xx.x.::.x.---:...........-.:x..x...:.x.::x..........::xx......x..x...-.:....:x.:x:.:.x.:x:::x:...............x....x::..--------.:.....:..:...x.......x...x.....:..xxx:.:.:xx:..:.:x:..x..........:.x..:x.........x:...........x......-:...x...x...........::.x.:-.::.:x.:.x...:..........:..:xx:x...x:x......:..x.xx..::x:.:....-.:..x.:..--:..::.:...---....:...x.-----..:.......x...xxx.:.-.....:..:x.:..:-...... 18M4I25M3D12M1D43M1D49M8D102M1I26M1I63M1I9M2D10M3I10M5I20M1D15M1I6M 277/408 67.9% 424/94230402 0.0% 32/408 7.8% 123774152 66440403 +3190 chr4 + 190214555 187718529 187718528 187718583 55 TGTTTTGTGTTTTTTTTTTTTTTCACTATAATCTGTTCTTTTTCCTTTTTTTTTC chr4 + 94230402 25763344 25763343 25763398 25763344 25763343 25763398 55 TGTTGTTAGTTTTTTTTTTTTTTCTGTAAAATCTGTTCTTTTTTTTTTTTTCCCC ....x.xx................xx..x..............::......:::. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 161955185 28259370 +3784 chr4 + 190214555 187725088 187725087 187725161 74 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......x......:.........:.::........x.xx:x...x.:...........:..x:xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 111691884 78522671 +3813 chr4 + 190214555 187777300 187777299 187777378 79 GTGGTGCATGCCTGTAATCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGGCAGAGGTTGTGG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--....:.:.........:..:........x.xx.x...x..........:..:..x:xx:..:...:. 10M2D67M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 111744099 78470456 +3326 chr4 + 190214555 187794486 187794485 187794555 70 TTGTGTACTGCTTAGGTTATTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGGTGGGGAGAGGGACA chr4 + 94230402 34825713 34825712 34825782 34825713 34825712 34825782 70 TTTCATATTTCTTACTGCATTTTGTGTCTTTTTCTTTTTTTTTTTTTTTTGGGGGGGGGGGAGGGGGGCA ..x::..:.x....xxx:.....x.x.....:.:................xx.:..x......:...:.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 152968773 37245782 +3131 chr4 + 190214555 187828490 187828489 187828557 68 TCTCAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAACCAAAAAAAAAAAAAACAGAGAGAGAGTGA chr4 + 94230402 67596939 67596938 67597006 67596939 67596938 67597006 68 TCTCAAAAAAAAAAAAAAAAAACCCAACAGAAAAAAAGCCAACCGAAACCAAAACCAAAACCAAGTAA ......................xx.x.x.:.......:....xx:...xx.....x:.:.xx:...:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 120231551 69983004 +3068 chr4 + 190214555 187828497 187828496 187828532 36 AAAAAAAAAAAAAAAAACCAAAAAAAAAAAACCAAA chr4 + 94230402 79219653 79219652 79219688 79219653 79219652 79219688 36 AAAAAAAAAAAAAAAGACCAAAAAAAAGAAACCAAA ...............:...........:........ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 108608844 81605711 +3061 chr4 + 190214555 187828503 187828502 187828542 40 AAAAAAAAAAACCAAAAAAAAAAAACCAAAAAAAAAAAAA chr4 + 94230402 17857823 17857822 17857862 17857823 17857822 17857862 40 AAAAAAAAAAACCAAAAAAACCAAACCAAAACAAAAAAAA ....................xx.........x........ 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 169970680 20243875 +3255 chr4 + 190214555 187828516 187828515 187828577 62 AAAAAAAAAAAACCAAAAAAAAAAAAAACAGAGAGAGAGTGAGAGAGAGATCTTATATTCTC chr4 + 94230402 75300442 75300441 75300503 75300442 75300441 75300503 62 AGATAAATGGGACCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATTCAGTATCATC .:.x...x:::.................x.:........x........:..::x:...:x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 112528074 77686481 +3448 chr4 + 190214555 187898309 187898308 187898391 83 AGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGTCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .......-----::.x......:...........::........:.xx.x...x.:........::.:..x:xx:..:..:.. 7M5D71M 56/78 71.8% 78/94230402 0.0% 5/78 6.4% 111865109 78349446 +3295 chr4 + 190214555 187906451 187906450 187906511 61 GTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ......x....:.:.........::::........x.xx.x...x.:........::.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 111873247 78341308 +10374 chr4 + 190214555 187908728 187908727 187909062 335 AAACACTGTATAAAATGCTTCGATTTGTAACAGAATTTAACACTGTCAGAAGTCATAAGGCAGTTTTGT---TTTTCCTAATTCACAATTAAGTTATAATAGCAGCAAGCTGACTTT-----------------ACTCAGTCACAGAGCCAGAGGATTTGATGAGGTGTACAATTTTCCCTCAAGGATAAAAATGTAATTATGAAAAAGTCCTGAACTGAAAAACAGTATTGTCAGCTATTTCCAAGAAAGATAAAAGATCATTTAAAGGTAAAGAGATTACAGATAAAAGGAATACAAAATTAAGTTGAAACCACCAGGGTAGAGAGAACAAGTTCTAAACAAGAACCAAACAT chr4 + 94230402 63980930 63980929 63981255 63980930 63980929 63981255 326 AAGCACCATATAATGAGTTTCAATTTG-AACGGAACTCTACCTTGTCATAATTTATAA------TTTGAGGATTTTCTGATATTGCATTTAAATTACAATAGCTGGAAG--AATTTTCCAGGGCTGTCAAAGCCACTCAGTTGCAAAAGCAGGGGATTTGATGATGTATACA--CTTCCCTTGAGGCCAAAAG-GTAATTACAGAGAAGTTCTGAACTGAAAAATAGTCTTGTCATCTGCTTTCATGAGAGACAAAAGAACACTTTAAGGTGAAGAGGTCATAG---AAAGGAA-AGaaaattaattaaaaa-----aaaaaaaaGAAAA--------AAGCAAGCAACAAGCAT ..:...::.....x:x.:...:.....-...:...:.:x..x:.....x..x.:....------....x---.....:x.xx.::..x....:...:......x.x...--:.:...-----------------.......::..:.:x...:...........x..:....--:......::...x:....:-.......:::.:....:.............:...x......x..::..:..x..:...:......x..:..x.....:.....:.:.:..---.......-.x........x.x:...-----.:::x.:...:..--------..:....x.x...:... 27M1D30M6D5M3I37M2D6M17I38M2D19M1D90M3D7M1D17M5D13M8D17M 226/306 73.9% 326/94230402 0.0% 49/306 16.0% 123927798 66286757 +3070 chr4 + 190214555 187933734 187933733 187933794 61 GTGCGCCTGTAATCCCAGCTATGCCAGAGGCTGAGGCATGAGAGTCACTTGAACTCGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.:.......:x:x.:........x.x..x..:x.........:.:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 111900530 78314025 +3077 chr4 + 190214555 187940325 187940324 187940384 60 TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGGGTATGTATGTGTGTGTGTATGTGTGTG chr4 + 94230402 85834541 85834540 85834600 85834541 85834540 85834600 60 TGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATG .....x.................:.xx:...:..:..::..:...:x:.::....x.:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 102105784 88108771 +3474 chr4 + 190214555 187952854 187952853 187953040 187 TCAGCACACACACACACACACACACACACACACACAGTTCAAATATAAAATGCTGCTTTTTCCAAAAATGTGATCATATCCTATTAAATGACCTGCCTTTTTTCCACTTATCTGTGAAAACTTTTTATGTCAATACATATATATATGCATTATATATATGCATTT-TATACACACACACACACACACA chr4 + 94230402 84895799 84895798 84895933 84895799 84895798 84895933 135 TCAAGATATACAGGCATACACACACACACACACACAGTTCCTATATAGAGTAT-------------------AGCATA---TATTTAGTG----------------------TGTG---------tatatatatatacatacatatacattatatataagtgtgtatatatatatatatatatatata ...:x.:.:...x:..:.......................xx.....:.:.::-------------------.x....---....x.:..----------------------....---------...:.xx...:.:...:....:...........x.::.x.-....:.:.:.:.:.:.:.:.:. 53M19D6M3D9M22D4M9D40M1I22M 98/134 73.1% 135/94230402 0.0% 54/134 40.3% 103057055 87157500 +3522 chr4 + 190214555 187952967 187952966 187953045 79 GTGAAAACTTTTTATGTCAATACATATATATATGCATTATATATA--TGCATTTTATACACACACACACACACACACACAC chr4 + 94230402 73857030 73857029 73857110 73857030 73857029 73857110 81 GTGAATATTTATAGTGAATATGTGAATATATGTGTAATATATATAGATGCATTATATACACACGTACACACACATACTCAC .....x.:..x.x:..xxx..:::x......:..:.x........--......x.........::.........:..x... 45M2I34M 59/79 74.7% 81/94230402 0.0% 2/79 2.5% 114095937 76118618 +3096 chr4 + 190214555 187984740 187984739 187984811 72 ACCAAAAAACAAAAAACAAAAAAAAAAAACAAAACAAAAAACAAAAAAAAAAACACACAAAAAACAAAAAAA chr4 + 94230402 11407772 11407771 11407843 11407772 11407771 11407843 72 ATCAAAGAGTGAAAAACAAACAAACAAAACAAAACAAACAAAAAACAGCCCCAAACCCCAAAAGCAAAACAA .:....:.:::.........x...x.............x..x...x.:xxxx.x..x.x....:.....x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 176576968 13637587 +3009 chr4 + 190214555 187984743 187984742 187984813 71 AAAAAACAAAAAACAAAAAAAAAAAACAAAACAAAAAACAAAAAAAAAAACACACAAAAAACAAAAAAACC chr4 + 94230402 37350817 37350816 37350887 37350817 37350816 37350887 71 AAAAAAAAACCACCAACGAACCAAAAAAAAACAAACAACAAAAAAAAAACCCACCAAACAACAACACAGCC ......x..xx.x...x:..xx....x........x.............x.xxx....x.....x.x.:.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 150633926 39580629 +3335 chr4 + 190214555 187984744 187984743 187984812 69 AAAAACAAAAAACAAAAAAAAAAAACAAAACAAAAAACAAAAAAAAAAACA-CACAAAAAACAAAAAAAC chr4 + 94230402 7076627 7076626 7076696 7076627 7076626 7076696 70 AGAAAAAGAAAACAAAACAAACCAATGAAACAAACAACAACAAAAAAAGCACCACAGAAACCAAACTAAC .:...x.:.........x...xx..::.......x.....x.......:..-....:...x....xx... 51M1I18M 54/69 78.3% 70/94230402 0.0% 1/69 1.4% 180908117 9306438 +3056 chr4 + 190214555 187984757 187984756 187984814 58 AAAAAAAAAAAACAAAACAAAAAACAAAAAAAAAAACACACAAAAAACAAAAAAACCC chr4 + 94230402 32356424 32356423 32356481 32356424 32356423 32356481 58 AGGAAAAAAACCCAAAACAAACAAACAAAAAAAAAACCCACCCAAAACAAAACAAACC .::.......xx.........x..xx...........x...xx.........x..x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 155628333 34586222 +3167 chr4 + 190214555 187994517 187994516 187994606 90 AAAAAAGAAAAAAAAAGAGAAAGAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAT chr4 + 94230402 49044722 49044721 49044811 49044722 49044721 49044811 90 AGAAAGGGAAGAGTTAAAGAAAGAAGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGAAAACTGAGACTAGGAAGAGGGAAAAT .:...:.:..:.:xx.:........:.:.::x...::.x.:...:..:...:...x....x.:::..xx:..:xx:.:.:..:....... 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 138949795 51264760 +3553 chr4 + 190214555 188002046 188002045 188002118 73 GTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCA chr4 + 94230402 76033204 76033203 76033276 76033204 76033203 76033276 73 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTA ....:.x....:.:...........::........x.xx.x...x::.........:.:..x.xx:..:..:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 111968842 78245713 +3435 chr4 + 190214555 188007509 188007508 188007600 92 GCGCACCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGGTGAGGTTGCAGTGAGCAGAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA .:....x....:.:........x..::........x.xx.x...x.x........::.:..xx.x:..:..:..------:.x...:..... 74M6D12M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 111974305 78240250 +3177 chr4 + 190214555 188009721 188009720 188009770 50 TTCTCTTAAGGAAAAAAAAAAAGAAAAATTAAATAAAAAGATTCTTTTTT chr4 + 94230402 75591300 75591299 75591347 75591300 75591299 75591347 48 TTCTCTTAAGGAAAAAAAAAAAAAAAAGTTAA--AAAAAGATTATGTCTT ......................:....:....--.........x.x.:.. 32M2D16M 43/48 89.6% 48/94230402 0.0% 2/48 4.2% 112418421 77796134 +3107 chr4 + 190214555 188009782 188009781 188009864 83 CATGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--.::.x....:.:...........::........x.xx.x...x::.......:.:.:..x:xx:..:..:.. 9M2D72M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 111976585 78237970 +10555 chr4 + 190214555 188011292 188011291 188011799 508 TTAATTACCTAATGCACTGGCTCTGACTGAATAAATTGCATGATTACCTCCTACACTGGACACAGAACAGTGCAAGTCATATTAAAAAGCCATTATATTTGCAACTCTGAGCAAGAGACTATAATTAAAAGGCAGTTGGATGAAATTAGCTTTGAGAGTACAAGAGTTTAAGCAAGATTTGGTAAATGAACATTAATGGTTAACATGTGGTTTTTATTAGGTCTTTTGCTTCT----TCTCTCCATAACCCCGGAGTTGAATTTCTTAGATGTCAGTG-GACCAGACATGTGAGA-ACACCTGTACAAAGCTATACTTTACCATGTGGCTAAAATTATATTCATAAAACAAGCCAACATAACTTTTGTGACTTTAGTAAATCAAAGGTATTAGACTAGAATGATCCCCTGGGCATTAATAAACTATTCTTAATGCTCCTAAGATTTTAGTTATATGTCATTAAAAGCATACTGTGTGCTCCATGCAACTTAAAATGTTTGTCATAAAATACACA chr4 + 94230402 64003885 64003884 64004356 64003885 64003884 64004356 472 TTAGTTACAAAATATGCTTGTTCTGATAGAATAAATTACA--AATAAATCCAGATTTGGATGCAGAACAGTGGAATTTATATTAAAAACTCATCATATTTGGATCTCATAGCAAGATACTATAGCTGAAAGGCAATTGAATAAAATTAATTTTGAGACTACAAGACTAGAAGCAGGTTTTAGTAAGTGAATA-------TTAACATGTGCATTTTATTATGACCCTCTCCACTTTTATTTTTTTTTAATTTCTTAGTTA----CTTTAGATGTCACTGAAATAAGACACATAAAAGACTCCCACACCAACTAGCATCGTTGCACTTTGTCTCTGTTCTGCTCATAAAATTGTTCTCC--TATGTCTCAAACACTGGTGAATCAAAG--------CTGAGGCCATCATGTGGGCTACAGTAAACTCTT-----TGTTC------TTTTAACTTGTTTTCATTAATGATAT----TTTGTTTCCTACAGCT----GTGTGTCACAGAAAATATGCA ...:....xx...:::..x.:.....:x.........:..--.x..xx...x:xx:....::..........x..x.:..........x:...:.......x.x...xx.......x......::.:.......:...:..:......::.......x.......x.xx.....:.x...:....:....:.-------..........xx........x.x.::.:x.:x..----.:.:.::x...:::.xx....:----::..........x..-:.:x.....::.:.:.-..x..:::..x..x:x::.::x.xx..:x.x.::xxx:..x.::........:x:x:.xx.--x.:x.:.xx:..x:.:..:........--------..:::::x...x:x.....xx:.:......x..-----..:..------.....::.xxx.x.......x:::..----.x..:.:.x.:..:..----:...x.xx..x......::.. 40M2D150M7D34M4I22M4D15M1I16M1I61M2D27M8D33M5D5M6D26M4D16M4D21M 303/466 65.0% 472/94230402 0.0% 48/466 10.3% 124007407 66207148 +3106 chr4 + 190214555 188033945 188033944 188034031 87 TGAGACTACTTTTTTTTCTTTTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 89555771 89555770 89555857 89555771 89555770 89555857 87 TGAAACACTTTTATTTCATTATTTTATTACTTTCACCTTTCTATTGCTATAGTATTCTTCTTCTTTTTTTTTTTTTTTTAGTTTTCT ...:..xx:...x...:x..x..:.x..x....:x::.....x..x:.x.xx.x.::.....:................xx....:. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 98478174 91736381 +3033 chr4 + 190214555 188033965 188033964 188034015 51 TTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTT chr4 + 94230402 8296022 8296021 8296072 8296022 8296021 8296072 51 TTTCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT .......x.:..xx...:xx:...:...................:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 179737943 10476612 +3121 chr4 + 190214555 188033965 188033964 188034032 68 TTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 58577649 58577648 58577716 58577649 58577648 58577716 68 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTGTTT .:.:.....:.:::.x.:x.x.....x...x...:.x.x.........::..........x...x... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 129456316 60758239 +3034 chr4 + 190214555 188033973 188033972 188034037 65 TCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTG chr4 + 94230402 58577649 58577648 58577713 58577649 58577648 58577713 65 TCTTTTTTTTTCCCCATCATGTTTTCATTTGCTTCCATGCTTTTTTTTCCTTTTTTTTTTGTTTG ......:....:.::x..x.x..:.:x:..x...::x.x:........::............... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 129456324 60758231 +3026 chr4 + 190214555 188034631 188034630 188034675 45 ATTTTACATTTTCTTTTTTTTTTTTTTCTTTTGAGATGGAATCTC chr4 + 94230402 22344089 22344088 22344133 22344089 22344088 22344133 45 ATTTTACCTTTTCTTTTTTTCTTTTTTTTTCTGACATAGAAACTC .......x............:......:..:...x..:...x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 165690542 24524013 +3048 chr4 + 190214555 188037751 188037750 188037822 72 CTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAAAGTAAAAAGAAAAGATAAGC chr4 + 94230402 54794471 54794470 54794542 54794471 54794470 54794542 72 CTTTCTCACAGGATAAAAGAAAAAAAAAAAGGAAAAAAAATGAAGTACCACAAGAAAAGGGCAGCGATCAGC ..x.....x.::.x....:...........:.........x:..:x.xx.x...x...::.x.:x...x... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 133243280 56971275 +3354 chr4 + 190214555 188037764 188037763 188037832 69 AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAAAGTAAAAAGAAAAGATAAGCTTAACAAAAA chr4 + 94230402 78266983 78266982 78267051 78266983 78266982 78267051 69 AAAAAAAAAAATCAAAAGGGAAAAGAGAGAAAGAGAGAAAGTATTAAGACCAGATAAGTACAAAAACAA ...........xx....:.:....:.:.:.....:.:......xx....xx.......:x:..x..x.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 109770781 80443774 +3026 chr4 + 190214555 188037767 188037766 188037871 105 AAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAAAGTAAAAAGAAAAGATAAGCTTAACAAAAAAGAAAAGAAACTTTTAACCTTTAGGTTGATTAAATTTCT chr4 + 94230402 64474160 64474159 64474262 64474160 64474159 64474262 103 AAAGACAAAAAAAGAAGAAGAAAAAAAAAAAGATAATGTAAATGAAAATTCAAAGTTTAATAAAACAAACAATGGTTATTTTG--TTGTGATTGGTTGGATTTTT ...:.x.......:.::..:.........:.:.x..x.....x::...xxxx...:....:....x.:.x..x::x:x...x:--..xx.:...:..::....:. 83M2D20M 66/103 64.1% 103/94230402 0.0% 2/103 1.9% 123563607 66650948 +3276 chr4 + 190214555 188040786 188040785 188040844 59 GCTCCTGTAATCCCAGCTACTCGAGAGGCTGAGACAGGAGAATCACTTGAACTCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..x.x....:.:.........:..:........x.xx.x...x.........:.:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 112007580 78206975 +3073 chr4 + 190214555 188040907 188040906 188040951 45 CTCCTTCTCAAAACAAAACAAACAAACAAACAAACAAACAAAAAA chr4 + 94230402 26431512 26431511 26431556 26431512 26431511 26431556 45 CTCCTTTCCAAAAAAAAACCAGAAAACAAACAAACAAACAGAAAA ......::.....x.....x.:x.................:.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 161609395 28605160 +3205 chr4 + 190214555 188043246 188043245 188043317 72 CCCCAGCCTGGGCAACAGAATGAGACTGCGTCTCAAAAAAAAAAAAAAAAAAGCAA--AGAAAAAAAAGAAAGC chr4 + 94230402 81193885 81193884 81193958 81193885 81193884 81193958 74 CCCCAGAAGAGCCAGCACAAGGGGACTGATTGTTAAAAAAAAAAAAAAAAAAGCAAGCAGACAAAAAGCAAAAC ......xxx:.x..:..x..x.:.....xx.x.:......................--...x.....:x...:. 56M2I16M 55/72 76.4% 74/94230402 0.0% 2/72 2.8% 106849361 83365194 +3695 chr4 + 190214555 188046417 188046416 188046508 92 GTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATGGTGCCA chr4 + 94230402 76033204 76033203 76033289 76033204 76033203 76033289 86 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......x......:.........:.::........x.xx.x...xx:.x.......:.:..x.xx:..:..:..------..x...:..... 74M6D12M 63/86 73.3% 86/94230402 0.0% 6/86 7.0% 112013213 78201342 +3464 chr4 + 190214555 188052579 188052578 188052650 72 GTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAACCCAGGAGACGAAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .::.x....:.:...........::........x.xx.x.:.x.............:..x:xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 112019373 78195182 +3060 chr4 + 190214555 188052689 188052688 188052747 59 CAGAGCAAAACTCAGTCAAAACAAACAAACAACAAAAAAAAAGAAAAAAAAGAAAAGAA chr4 + 94230402 82907896 82907895 82907954 82907896 82907895 82907954 59 CAGAAATGATCTCATTCAAAACAGACAAACAAAACAGAAAAAGCAAAAAACAAAAAAAA ....:xx:.x....x........:........x.x.:......x......x:....:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 105144793 85069762 +3719 chr4 + 190214555 188052923 188052922 188052999 77 GTCACGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x::..:.x......:...........::........x.xx.x...x::...........:..x.xx:..:..:.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 112019722 78194833 +3548 chr4 + 190214555 188057090 188057089 188057150 61 GTGCGCCTGTAATTCCAGCTACTTGGGAGGCTGAGGCACGAGAATCCCTTGAACCTGGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....:.x....:.............::........x.x:.x...x.x........::.:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 112023886 78190669 +3358 chr4 + 190214555 188066678 188066677 188066761 84 ATATTTTACATATGTATTTTTACACACACATATATATATATATACACAAATATATATATATATATATACACAAATATATATATA chr4 + 94230402 56867285 56867284 56867363 56867285 56867284 56867363 79 ATATTTTATACATAT-----TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA ........:.:..:.-----.:::::::x...:...:.:........x.......x.:.::..:....:....:...:..:.:. 15M5D64M 54/79 68.4% 79/94230402 0.0% 5/79 6.3% 131199393 59015162 +3339 chr4 + 190214555 188066692 188066691 188066769 78 TATTTTTACACACACATATATA--TATATATACACAAATATATATATATATATATACACAAATATATATATATATATATA chr4 + 94230402 20811741 20811740 20811820 20811741 20811740 20811820 80 TGTTCTTACACAGAAAAACATAGCTAAATCTTTATTAATATACACAGAAATATATACACTAATATATATGTATATGTACA .:..:.......x.x.x.:...--..x..x.x:.:x......:.:.x.x..........x.........:.....:..:. 22M2I56M 58/78 74.4% 80/94230402 0.0% 2/78 2.6% 167254951 22959604 +3604 chr4 + 190214555 188070565 188070564 188070630 66 GTGGTGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAG chr4 + 94230402 76033201 76033200 76033264 76033201 76033200 76033264 64 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..........--....:.:...........::........x.xx.x...x.:........::.:.. 10M2D54M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 112037364 78177191 +3143 chr4 + 190214555 188072858 188072857 188072940 83 AAGAATCTGCCTCAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAGAAAGAAAAACCAATTGAAAAGAGAAAAAAAC chr4 + 94230402 31955443 31955442 31955525 31955443 31955442 31955525 83 AAGAGTGAGACACAAGACAATAAGAAAGAAAAGACAAAGAGGAGAGAGAAAACAAGGGAGATTAATGAAGACCAAAAAGAAGC ....:.xx.x.x...:.x..x..:...:......x.....::...:.....:x...::.:.::...x:.:.xx.:...:..:. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 156117415 34097140 +3047 chr4 + 190214555 188086798 188086797 188086846 49 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGATATAGTCTTTTTTT chr4 + 94230402 41375524 41375523 41375572 41375524 41375523 41375572 49 CTAAATAGAAGAAAAAAAAAAAAAAAAAAAGGAGATATGATCTTAATTT ..x..x.:..:..................:........::....xx... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 146711274 43503281 +3479 chr4 + 190214555 188088323 188088322 188088412 90 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCCTTTGAACTCTGGAGTTGGAGGTTGCAGTGAGCCAAGATCATGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ....x....:.:...........::........x.xx.x...x.x:......:.x.:..:.xx:..:..:..------..x..x...... 72M6D12M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 112055117 78159438 +3021 chr4 + 190214555 188099564 188099563 188099614 51 AAAAAAAAAAACCAAAACCAAAACCAAAAAAAAAAAAACCCTGCTTTTCTG chr4 + 94230402 33976331 33976330 33976381 33976331 33976330 33976381 51 AAAAAGAAAAAGAAAAACAAAAACCACACACAAAAAAACCCTGCTTCTGTG .....:.....xx.....x.......x.x.x...............:.x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 154123233 36091322 +3087 chr4 + 190214555 188100582 188100581 188100651 70 CGTAGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.--...x....:.:...........::........x.xx.x...xx:.x.......:.:.. 10M2D58M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 112067385 78147170 +3390 chr4 + 190214555 188112760 188112759 188112842 83 CATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGTAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTG--CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:.--...x....:.:...........::........x.xx.x...x.::........:.x..x:xx:..:..:.. 10M2D71M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 112079563 78134992 +3158 chr4 + 190214555 188115738 188115737 188115778 41 TTAAAAAAAAAAAAAGAAAGAAAATGGAAACAGCCAGGCAC chr4 + 94230402 58594025 58594024 58594065 58594025 58594024 58594065 41 TTAAAAAAAAAAAAAGAAAGAAAATTGAAGCATCCAAGCAC .........................x...:..x...:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 129521713 60692842 +3734 chr4 + 190214555 188129465 188129464 188129533 69 GTGCACTTATAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGGC chr4 + 94230402 76033204 76033203 76033272 76033204 76033203 76033272 69 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGC ......x.:....:...........::.:......x.xx.x.:.x.......:.....:..:.:x:... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 112096261 78118294 +3081 chr4 + 190214555 188137275 188137274 188137319 45 GCAGTTAGTGTTATTGTAGTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 66040137 66040136 66040181 66040137 66040136 66040181 45 GTAGTCAGTATTTTTGCAGTCTTTCTCTTTTTTTTTTTTTTTTCT .:...:...:..x...:.......:.:................:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 122097138 68117417 +3024 chr4 + 190214555 188145442 188145441 188145492 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCAGAAATGGAATGA chr4 + 94230402 74764025 74764024 74764075 74764025 74764024 74764075 51 AAAAAAAAAAAAAGAAAAGAAAATGGGATAAAACAGTCAGAAATGTAAAGA .............:....:....x:::.x....x...........x..x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 113381417 76833138 +3466 chr4 + 190214555 188164480 188164479 188164562 83 CGTGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAAGAGAATTGCTTGAACTCAGGAAGGAGAGGTTGTAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::........:.--......:...........::.:......x.xx.x...x::.......:...:.:xxxx:..:..... 14M2D67M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 112131283 78083272 +3023 chr4 + 190214555 188166207 188166206 188166250 44 TTTCTTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTCTCTTTCT chr4 + 94230402 49829864 49829863 49829907 49829864 49829863 49829907 44 TTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCT ...........::...............:...::.:.:..::.. 44M 35/44 79.5% 44/94230402 0.0% 0/44 0.0% 138336343 51878212 +3063 chr4 + 190214555 188173381 188173380 188173437 57 AGACTCCATCTCAAAACAAAACAAAACAACAACAACAAGAAGAAAAATTAGCTGGGT chr4 + 94230402 80206919 80206918 80206970 80206919 80206918 80206970 52 AGAGTCTACAGCAAAACAAAACAAAACAACAACAACAAAAAAAGAA-----CTGGGT ...x..:.:xx...........................:..:.:..-----...... 46M5D6M 44/52 84.6% 52/94230402 0.0% 5/52 9.6% 107966462 82248093 +3034 chr4 + 190214555 188178297 188178296 188178346 50 TTTTCTTTTTTTTTTTTTTTTGGTAACTAACATTGCAAAGTAAACATTAT chr4 + 94230402 28200372 28200371 28200421 28200372 28200371 28200421 50 TCTTTTTTTTTTTTTCCTTTTGTCAACTATCATTGCAATAGAAACATTAT .:..:..........::.....x:.....x........x:x......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 159977925 30236630 +3202 chr4 + 190214555 188181112 188181111 188181157 46 ATTGTTGAAAAAAAATGCAAGGAATAAATTTTTTTTTTTTTTTTTT chr4 + 94230402 22025220 22025219 22025265 22025220 22025219 22025265 46 ATTACTGAAAGAAAATGCAAGGTGTGACTTTTTTTTTTTTTTTTTT ...::.....:...........x:.:.x.................. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 166155892 24058663 +3595 chr4 + 190214555 188181953 188181952 188182024 72 GCACCTGTAATACCAGCTACCTGAGAGGCTGAGTCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.x........:...:........:.xx.x...x.:.........:.:..x:xx:..:...:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 112148747 78065808 +3200 chr4 + 190214555 188188728 188188727 188188799 72 GCGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:.::..........::........x.xx.x...x::.........:.:..x:xx:..:..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 112155522 78059033 +3272 chr4 + 190214555 188191555 188191554 188191613 59 GCACCTGTAGTCCCAGCTACTTGGGAGCCTGAGGCAGGCGAATCATTGGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::..x.....x.xx.:...x..:.x......:.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 112158349 78056206 +3670 chr4 + 190214555 188192504 188192503 188192564 61 GTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAG chr4 + 94230402 76033204 76033203 76033264 76033204 76033203 76033264 61 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ...::.x......:...........::........x:xx.x...x.............:.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 112159300 78055255 +3062 chr4 + 190214555 188193597 188193596 188193648 52 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTCTGCCTTGTTGA chr4 + 94230402 39542977 39542976 39543028 39542977 39542976 39543028 52 GTGTTAAGAAAGGAGAGAAAAAAAAAAAAAAAAAGGAACTATGCTCTTTTGA ..x.:..:...::.:.:.................:.....x...::.x.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 148650620 41563935 +3129 chr4 + 190214555 188200211 188200210 188200275 65 TTCTCTAATATATATATATATATATTTTCTCTAATATATAAATATATATATATATATATATATTT chr4 + 94230402 7572248 7572247 7572312 7572248 7572247 7572312 65 TTCAATAACATATAAACATGTGTATGTTTCTCCATAGGTAAATATGTATATGTATAGATATATTT ...xx...:.....x.:..:.:...x..::::x...x:.......:.....:....x........ 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 180627963 9586592 +3102 chr4 + 190214555 188200245 188200244 188200290 46 TATATAA-ATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 + 94230402 24792618 24792617 24792664 24792618 24792617 24792664 47 TATGTAAGATATATATATATATATATAGGTTTTTTTTGTTTTTTTTT ...:...-...................x:........x......... 7M1I39M 42/46 91.3% 47/94230402 0.0% 1/46 2.2% 163407627 26806928 +3486 chr4 + 190214555 188205421 188205420 188205505 85 ACATGATAATCTCTGTCTCTCTCTTTGTGTATATATATGTGTGTGTGTGCATGTATATATATACTTTCTCTATATATTCATATAG chr4 + 94230402 60831525 60831524 60831602 60831525 60831524 60831602 78 acaTATCTATCTCTGTCTCTCTCTCTCTGTGTATATATGTGTATACACACACGCACA-------CTTCTAAATACATTTATATGG ....:x:x................:.x...:...........:.:::::..:.:.:.-------:....xx...:...:....:. 57M7D21M 56/78 71.8% 78/94230402 0.0% 7/78 9.0% 127373896 62840659 +3354 chr4 + 190214555 188207906 188207905 188207979 74 ATGCCCCCACAAAAAAGTGTGTGTGTGTGTGTGTATATATACACACACATACACTTTATGTTTACATATTTATA chr4 + 94230402 5327027 5327026 5327099 5327027 5327026 5327099 73 ATGCTTTAAAGAAAAAGTGTGCATGCCTGTGTGTATATATGCATAAATATGTACTTTATA-ATATCTATTTATA ....:::x.x:..........::..:x.............:..:.x.:..::.......:-x..:x........ 60M1D13M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% 182880879 7333676 +4629 chr4 + 190214555 188216026 188216025 188216258 233 TTCCCTCCCTCCCTCCCTC---CTTCCTTCCTTTTCCTTCCTT----CCCTCTTTTCTTCCCTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCTTCCTTCCTTCCCCCCTTCCTTCCCCCCTTCCTTCCCTCTCTTCTTCCCTCCTTCCCTCCTTCCCTGTC----------TCCTTCCCTGTCTCC-----TTCCCTCCCTCCTTCCCTGTCTCCTTCCCTCCTTCCCTCTCTCCTTCCCT---CCTCCCTCCCTCCT chr4 + 94230402 67728276 67728275 67728532 67728276 67728275 67728532 257 TTTTCTGCCTGTCTTCCTTTGGCTTCTTTGTTCTTTCATGCTTATGCCTCTTTTTTTTCCCCTACACCCTTCTCATATTTCTCCCTACC-CATCTGTTACTACTCCTACTACTTTCCCCATCTTCTGCCCCAGTTCTTTCCTCATCCTCTCCATCACCCACGTGGATCCAGTCCTCCCTTGGCTCCTTTTTTTTCATCCACCTCCTCCTAAACTGTTCCTTGGCTCCCTGTCAGCTTCCTTGTACCTCTGTGCCTCCT ..::..x...x:..:...:---....:..x:.:..:.x.x...----.:..:....:.:....x.x:..:....x:x..:.::...x..-.x.::x..x..x.:..:x:.x...:....x.::::.x..:.xx.....:....x.:.:....x..x.:xx.----------....:..:..x....-----..:.x...x:.::::...:xx::x....:.xx:.....x..xx.....:.---....:x.x...... 19M3I21M4I42M1D71M10I15M5I50M3I14M 145/232 62.5% 257/94230402 0.0% 26/232 11.2% 120487750 69726805 +3133 chr4 + 190214555 188216219 188216218 188216304 86 TTCCCTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCCTCCTTCCTTCCCCCCTTCCTTCCCTCTCTTCTTCCCTCCTTCCCTCCTTC chr4 + 94230402 53764543 53764542 53764628 53764543 53764542 53764628 86 TTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC ..:..:.::...:.::...:........::..x.x.:.x..:.::.::x.:.::..x..:.:...:x...::x:.x.....:..:. 86M 51/86 59.3% 86/94230402 0.0% 0/86 0.0% 134451676 55762879 +3042 chr4 + 190214555 188216327 188216326 188216411 85 TCCCTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCCTCCTTCCTTCCCCCCTTCCTTCCCTCTCTTCTTCCCTCCTTCCCTCCTTC chr4 + 94230402 53764544 53764543 53764628 53764544 53764543 53764628 85 TTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCC .:..:.::...:.::...:........::..x.x.:.x..:.::.::x.:.::..x..:.:...:x...::x:.x.....:..:. 85M 50/85 58.8% 85/94230402 0.0% 0/85 0.0% 134451783 55762772 +3023 chr4 + 190214555 188216629 188216628 188216675 47 CCCCTTCCTTCCCTCTTTTCTTCTCTCCTTCCCTCCTTCCCTCTCTC chr4 + 94230402 49829860 49829859 49829906 49829860 49829859 49829906 47 CCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCC ...x..:...:.:.:.........:......:....::...:...:. 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 138386769 51827786 +3394 chr4 + 190214555 188216657 188216656 188216746 90 TTCCCTCCTTCCCTCTCTCCTTCCCTCCCTC--CTTCCCTCTCTCCCTCCCTCTCT-CCTTCCTTCCCTCTTTTCTTCCCTCCTTCTCTCTCT chr4 + 94230402 53764543 53764542 53764635 53764543 53764542 53764635 93 TTTCCCCTCTCCTTTCCTCTTTCCCTCCCTCCACACCCATTTCCCCTTGCTTCTCTACCTTTTCTCATTCTTGTCATCCCTTCTCCAGACTCT ..:..:.::...:.::...:...........--.x:..x.:..:..:.x.:.....-....:::..x:....x..x.....:..:.xxx.... 31M2I23M1I36M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% 134452114 55762441 +3430 chr4 + 190214555 188216672 188216671 188216816 145 TCTCCTTCCCTCCCTCCTTCCCTCTCTCCCTCCCTCTCTCCTTCCTTCCCTCTTTTCTTCCCTCCTTCTCTCTCTCCCTCCCTCCTTCCTTCCTTCCTTCCCTCCTTCCCTCTCTCCTTCCCTCTCTCCTTCCGTCTCTCCCTCC chr4 + 94230402 93283200 93283199 93283344 93283200 93283199 93283344 145 TCACATCTCCATCCATCGTCCCTTTTTCCTTCTCCCTCTTCTCCCCAGAGCATCATCTTCTCCCTGGATCGTTTCTTCTCCATCCATCGTCTCCCCTTCTCCATCCATCCTCTCCCCCTCCACTTGCATTGCCCTTTCTCCCACC ..x.x.::..x:..x:.x.....:.:...:..:.:....:..:..:xxxx:x.:x.....:.:.:xxx..x:.::::....x...x..x.::.::.:.::..x:.:x:......:..:...x::.x:x:.x..x.:......x.. 145M 80/145 55.2% 145/94230402 0.0% 0/145 0.0% 94933472 NA +3601 chr4 + 190214555 188223950 188223949 188224022 73 TGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTGGAACCCAGGAGGTGGAGGCTGCAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.x......:...........::........x.xx.x...x::..x........:..x.xx:.....:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 112190745 78023810 +3425 chr4 + 190214555 188235022 188235021 188235104 83 CATGGTGGCAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAACTTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGT--GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::....:--....x....:.:...........::........x.x..x...x::.......:::.:..x:xx:..:..:.. 9M2D72M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 112201825 78012730 +3029 chr4 + 190214555 188244371 188244370 188244462 92 AGCAGTATTTGCCTTATCTCACTCAGCACAGCGGCCTCTACGTTCATCCCTCTTTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTGACAG chr4 + 94230402 79175983 79175982 79176074 79175983 79175982 79176074 92 AGTAGAATATGTCTTCTTGAGCTCAGCTTCATTGCTTCCCCCCCCCCCCCTTTTTTTTTTCTTTTTTCTTTCCTATCCATTCTTGTGTGCAG ..:..x..x..:...x.:xx:......x:x::x..:..:x.x::.x:....:....................:.x.::x..:..x.xx:... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 109068388 81146167 +3137 chr4 + 190214555 188249487 188249486 188249527 41 CTCAAAAAGAAAAAAAAAAGAGAGAGAGAGAGAGAAAATGA chr4 + 94230402 66158975 66158974 66159015 66158975 66158974 66159015 41 CTCCAAAGGAAAAAAAGAAAAGAGAGAGAGAGAGGAAATGA ...x...:........:..:..............:...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 122090512 68124043 +3368 chr4 + 190214555 188250238 188250237 188250309 72 GCGCCTGTAACCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGCAGGTGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..:.x....:::...........::........x.xx.x...x::...........x..x.xx:..:..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 112217032 77997523 +3497 chr4 + 190214555 188258582 188258581 188258651 70 CATGGTGGTGCATCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCA--CGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........--.x....:.:...........::........x.xx.x...x::.........:.:.. 12M2D56M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 112225385 77989170 +12834 chr4 + 190214555 188262865 188262864 188263737 873 TTGTCAT-------TTTTACAATGAGAAGCAAGAATTTTGAAACA--TTAAGT---CACAATTT--TCCAGT---CTATAATCATCGATCAACTGCCTAATTAATAAATAACCTTTTAAATGGTTTGGACTTCATTTTGGTTAGAATCACTTAGGCAAATGGCAAATATTAATGTGAAATTAGAGCTCGCAAGTAAGTAGTTATGAATAATTTGATAGATTATAACA---GCCCTTTTGTAATATTTTAAATCACTCTT-ATTGCAGTTAGCAGACAATAATTGTCAGAGTATT---TGCATATTACTTTAGTTAACACAT---GGGCTGT---------------------TTTAAAATGAAGTATTTTTGCTCTTATCCTTCCACTGGAATTAATGGGTG----ATGTCATGTATTTGCTTTGCTTCTTACCATTGTATTGATTTTATCACCTGATTGTATACTGTACAACATAAAATTATTATTATTTTTGCCATCAATAAGAAATTTACTTGTTTTAAAAAAATCCAAATGCTTTTTAAAACTAGTGTAGGGGAAGAAAATATACCTAATGATGCCT---GCTCA----CTTGGAACCTGCTTTTTAGAAAGCAGCACGTAGGGTTGAGATAAGCTGCTGTGACTAGAATTTGTAATCTTACTCAGCTGGTATTCAAAGACAGTAAATGTGAAGGGGCTACTGAAAGCAATGAACTTAATAACCACATACCAGAGAGGACATTAGCTGTGATATTACAGATGAATGCAGGCTGCTATGTAACTTTGTGT--CTTTGCTTTTTAAAGTGATAAATGGAAGC-----CCTGCGAAAATCCGTGAGGTGAGCATAAGATAGCCGCTGACTCTAGAATGAACA---GTATTAACCCCA--------------CTGGTTTGGC-GCATGATGAAATGAAG--GACAGATC-CATTGTGTTT chr4 + 94230402 64047679 64047678 64048554 64047679 64047678 64048554 876 TTGTCATCATTTTGTTTTACAGTGATAAATGCAAATGTTGACACAGATTATATGTACAGAATGTACTCAAATGAGACATAATTGTTAATAAATGACTTAATGGATATATAAATCTTTAAAATTTTTGGTCTTCAAT--GCTTAGCTACATTTTTGCAAACAGTGATCATCAGTGATAGATCAGAACTGATCTGTGTGTGACTATGAATAGCTTTATATAATTTAATGCATTATCCTTTGTAATTCTTTGATTCACCCCTCACTGTAGTGAATAGATG-TGGCTGTCATATTATGGTGTTTAAATGACTAAACCTATAACGTAAAGACCtatatctttatatatatatatatatttaacatata-tgtttatactattatttatttatttatTCTGAAAGGAGTACCAAACAACTTATTTACTAAGCTTCTTAACATTCCATTGACTTTATCAC---ACTGAAGACTGAAAGGCA--AAATTATT-----TTTCTCCAACA---------------GTTTTGATCAA---------------------------GGGAGAGAAAA--------GTGATTCCTTCTGCTCAACTGCTTGAGGTTTGCTTCTTGGATACAAAAAGATTGTGTTGGTATAAACTACTGT--CTTAGGCTTATAAACTCATCCAGCTAGCATCCAGAGGCTATAAATGTCAAGATGCCACTCAATGTGATGAACTTAATAAGCACATACCAGGAACGATATTAGCTCTAATACTGTCAATGAATGCACGCTGTTATGAAAGTTTTTGTAGACCTGC-ATCCAAAAAGCTAATTGCAATCATAAACCAGGGAAAAT-----------------GATAGCCATTGAACCTCAAAGATACGTGTTTATTAACCCTATTAAGTAGTTACACCTGATATAACTGCATGATGAAATGGAGCTGAGAGATTACCTTATGTTT .......-------.......:...x..:::x:...x....x...--...x:.---..x...x.--..x.:.---x:.....::.::..x..:x:.:....x:...x....x::......xxx.....x.....x.--.x....xxx..:..xx.....::.::.x:..:.:..xx.:..:...:..x::xx..:x..:::........::..x...x.x.x...::---xx:.:........x:...:.x....:.:.-.:..:...x.::...::-.:::.....x.x...x---.x:.x..x...xx.x:..xx..:.---.:x..:.---------------------.....x..:x.-.:...x.:..x....::x.::.:.x:xx:.:.x:..x.----.x::x.:x.....:..xx........x....x:.....:........---.:..x.x....x.x::..--........-----...:x...x..---------------.....:.xx..---------------------------...::......--------:....x...---.....----....:::::.....:..:..x.xx.:x.x:.x.x....:x....:..:....--..x::::..:...x..:.::.....:.:..:..:..:.x:.......x...:x..:...x..x.::.............x..........::.x..:.......x.:...:.::x:.........x....:....x..x...x...--x::...-x.::...:x.x...x..x..x.-----..x.x......-----------------.......::...x:..x:..x:x..:---x.........:.--------------...:.x.::.-.............:..--..x....:-.x..:..... 7M7I31M2I6M3I8M2I6M3I61M2D89M3I29M1I17M1D16M3I24M3I7M21I11M1D38M4I47M3D18M2D8M5D11M15D11M27D11M8D9M3I5M4I52M2D146M2I6M1D22M5I11M17D26M3I12M14I10M1I16M2I8M1I10M 528/789 66.9% 876/94230402 0.0% 171/789 21.7% 124215186 65999369 +3719 chr4 + 190214555 188276418 188276417 188276488 71 CACCTGTAATCCCAGCTGCTTAATAGGCTGAGGCATGAGAATCACTTGAACCCGGGAGGCGGAGGTTGTAG chr4 + 94230402 76033207 76033206 76033277 76033207 76033206 76033277 71 CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...x....:.:......:...:.x........x.x..x...x...........:.:..x:xx:..:..... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 112243211 77971344 +3156 chr4 + 190214555 188284555 188284554 188284626 72 GCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGAAAGAGAATCACTTGAGCCAGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x....:.:...........::........xxxx.x...x.......:..x:.:..x:xx:..:..:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 112251349 77963206 +3273 chr4 + 190214555 188285514 188285513 188285635 122 CGTTACTGTTAGTGTATTTTATGTGTG----GCCCAAGGAAATTCCTCTTCTTCCATTGTGGCCCAGGGAAGCCAGAAGATTGGACACCTCTCATGTAAGTAGCAGCCGGAAACTGAAGAACCTCA chr4 + 94230402 47258211 47258210 47258329 47258211 47258210 47258329 119 cattactttcacagtgacctacACGTACACAGCCCAATGCAGTTCCTCTCCAGTCCACGTAGCCCAGGTAAGCCCAAGGGTTGGAGACCTCT-------GTAGTAGGAGGACACAGAAAACACCCA .:.....x.:.xx..:x::..:::..:----......x.x.:.......:.xx:.xx:..:.......x.....x:.:.:.....x......-------....:..xx...x..x...:.xx.:.. 27M4I61M7D27M 76/115 66.1% 119/94230402 0.0% 11/115 9.6% 141027303 49187252 +4158 chr4 + 190214555 188285514 188285513 188285601 88 CGTTACTGTTAGTGTA----TTTTATGTGTGGCCCAAGGAAATTCCTCTTCTTCCATTGTGGCCCAGGGAAGCCAGAAGATTGGACACCTCT chr4 + 94230402 84344454 84344453 84344545 84344454 84344453 84344545 92 cattactttcagagcaacctTCTTAGATGCAGCCCTAGGTAATTCCTATTCACTCATTGTGGCTCAGGGAAGACAGAAGGTTGGATAGTCCT .:.....x.:..x.:.----.:...x:..::....x...x.......x...x::.........:........x......:.....:.x::.. 16M4I72M 65/88 73.9% 92/94230402 0.0% 4/88 4.5% 103941060 86273495 +3160 chr4 + 190214555 188303777 188303776 188303846 70 CTCAAAAAGAAAAAAAAAACCACCACCACAACAAAAAACAACAAAAAACAAAACAAACAAAATACAAAAA chr4 + 94230402 42911769 42911768 42911836 42911769 42911768 42911836 68 CTCAAATCCAAAAAAACCACCACCACCACCACCAACAACAACAACAA--AAAACAAAAAACAAACCAAAA ......xxx.......xx...........x..x..x........x..--........x..x.x..x.... 47M2D21M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% 145392008 44822547 +3112 chr4 + 190214555 188306468 188306467 188306522 55 AAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAA--GAAAGGAAAAAAAAAGTTTTAAT chr4 + 94230402 29253000 29252999 29253056 29253000 29252999 29253056 57 AAAAGAAAAAGTGATAGAAAAAAAAAAAACAATTGAAAGGGAAGAAAAAGTTTTAAT ..........:x..x.::....:....:.x..--......:..:............. 32M2I23M 45/55 81.8% 57/94230402 0.0% 2/55 3.6% 159053468 31161087 +3103 chr4 + 190214555 188308447 188308446 188308483 37 TTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT chr4 + 94230402 14999532 14999531 14999568 14999532 14999531 14999568 37 TTTTTGTTGTTGTTGTTATTGTTTGTTTGTTTGTTTT .................:..x................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 173308915 16905640 +3348 chr4 + 190214555 188308451 188308450 188308486 36 TGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTT chr4 + 94230402 59675248 59675247 59675283 59675248 59675247 59675283 36 TGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTT .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 128633203 61581352 +3198 chr4 + 190214555 188312324 188312323 188312408 85 TGTGTCTACTTAGTTACTCAGTTTTCTTCTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 51335300 51335299 51335384 51335300 51335299 51335384 85 TATGTCTTTTCAGTCACTTGGCATGATTTCCTGGTTTCTCACAGTTCTCATTCTCTCTTTATTTTTTCTTTTTTTTTCCTTCTTT .:.....x:.:...:...::.:x.xx..::..xx.....:x:xx....:x:.:...:...x......:.........::..:... 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 136977024 53237531 +3120 chr4 + 190214555 188322528 188322527 188322610 83 AGTGGTCATGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAAGCCAGGAGGCAGAGGTTGCAG chr4 + 94230402 76033200 76033199 76033277 76033200 76033199 76033277 78 AGTGGT-----GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----.::.x......:...........::........x.xx:x...x::......x....:..x:xx:..:..:.. 6M5D72M 55/78 70.5% 78/94230402 0.0% 5/78 6.4% 112289328 77925227 +3247 chr4 + 190214555 188336190 188336189 188336259 70 TCCATTCCACACTTTCTCTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGACACGG chr4 + 94230402 56907954 56907953 56908017 56907954 56907953 56908017 64 TCAAGTCCACCCTTTC------CTCCTCCATCTTCTCTCTCTCTTTTTTTTTTTTTTCTTTTTGGCAAGG ..x.x.....x.....------..:..:.x......:::.:.:..............:......:..x.. 16M6D48M 50/64 78.1% 64/94230402 0.0% 6/64 9.4% 131428236 58786319 +3030 chr4 + 190214555 188336205 188336204 188336247 43 CTCTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 44980312 44980311 44980354 44980312 44980311 44980354 43 CTTCCTTTTTCTTCTTCCACCTCTTTTTTTTTTCTTTTTTTTT ..::...:.........:x.:............:......... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 143355893 46858662 +3157 chr4 + 190214555 188345642 188345641 188345682 41 AAATAAATAAATAAATAAATAAAAATAAATCGATCTGAAAA chr4 + 94230402 12563428 12563427 12563468 12563428 12563427 12563468 41 AAGTAAATAAATAAATAAACAAAAACAAACCGATCTGGAAA ..:................:.....:...:.......:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 175782214 14432341 +3731 chr4 + 190214555 188362326 188362325 188362415 90 GCTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAAACGGTGCCA chr4 + 94230402 76033206 76033205 76033289 76033206 76033205 76033289 84 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ..x.x......:...........::........x.xx.x...x...........:.:..x:xx:..:..:..------..x.:.:..... 72M6D12M 62/84 73.8% 84/94230402 0.0% 6/84 7.1% 112329120 77885435 +3278 chr4 + 190214555 188366632 188366631 188366711 80 ATATATATATATATATATATATATATATATATATATACACACACACACACAC----ACACACATTATATATATATATATATACA chr4 + 94230402 23247722 23247721 23247805 23247722 23247721 23247805 84 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATA ..:.:.:...::.:.:.:..x...:x.:....:..:.....:..........----.x.x.x:...:..:x...x.......:. 52M4I28M 56/80 70.0% 84/94230402 0.0% 4/80 5.0% 165118910 25095645 +3392 chr4 + 190214555 188366634 188366633 188366723 90 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACATTATATATATATATATATACACACATATATAAT chr4 + 94230402 23247722 23247721 23247811 23247722 23247721 23247811 90 ATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATATGAAAT ..:.:.:...::.:.:.:..x...:x.:....:........:...........x:x.xx.x.xx..:..:x...x.:.:.:....:x... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 165118912 25095643 +3064 chr4 + 190214555 188366649 188366648 188366692 44 TATATATATATATATATATACACACACACACACACACACACATT chr4 + 94230402 4409082 4409081 4409125 4409082 4409081 4409125 44 TGTACATATATATATATATACACACACAGAGACACACACATTTT .:..:.......................x.x.........:x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 183957567 6256988 +3096 chr4 + 190214555 188366651 188366650 188366692 42 TATATATATATATATATACACACACACACACACACACACATT chr4 + 94230402 4409082 4409081 4409123 4409082 4409081 4409123 42 TGTACATATATATATATATACACACACAGAGACACACACATT .:..:.............:.........x.x........... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 183957569 6256986 +3438 chr4 + 190214555 188388698 188388697 188388776 79 GTGGCGCATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:...:.--....:.:............:........x.xx.x...x::........::.:..x:xx:..:..:.. 10M2D67M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 112355497 77859058 +3026 chr4 + 190214555 188397005 188397004 188397067 63 AAAAAATATATATATATATATATACACACACACACACACACACACACACATATATATATAGAA chr4 + 94230402 74671066 74671065 74671128 74671066 74671065 74671128 63 AAAAATTAGCTGTATATATATATATATACACACACACACACAAAAAAAAATAGCTAAAAAAAA .....x..xx.:............:.:...............x.x.x.x...xx..x.x.:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 113725939 76488616 +3165 chr4 + 190214555 188397022 188397021 188397066 45 ATATATACACACACACACACACACACACACACATATATATATAGA chr4 + 94230402 46140856 46140855 46140900 46140856 46140855 46140900 45 ATATATATACACACACTCTCACATACACACACGTGTATATACAGA .......:........x.x....:........:.:......:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 142256166 47958389 +3608 chr4 + 190214555 188398088 188398087 188398187 100 CGTGGTGGTGCGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGAGGTGGAGGTTGCAG----------TGAGCAGATATCGTGCC chr4 + 94230402 76033197 76033196 76033303 76033197 76033196 76033303 107 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGT-GTGCC .:::.......::.--....:.:...........::........x.xx.x...x.:......:..:.:..x.xx:..:..:..----------::.......:.-..... 14M2D67M10I11M1D5M 70/97 72.2% 107/94230402 0.0% 13/97 13.4% 112364891 77849664 +6004 chr4 + 190214555 188398911 188398910 188399087 177 AAGGTGAATATCTCCCCACAGCAGACCTCC--GAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACAGTGATCAGGGCCAGTTTCCAATATGGAGACAAGAGCTCTTTAATCACG--CTCTTCCCTGCAAAAGAAAAAGATTGGCATTTAACAGAGAGCTGTAAGACAGGAT chr4 + 94230402 64073870 64073869 64074050 64073870 64073869 64074050 181 AAGGTGAATATCTCCTACAAACAGTCTTTAAGGAGTTTCATAAATTATTTATAAAATACTGAAATGTACTGTTCTGCTAGCCAAGAATGTTGCCTAATATGGAAAAAAGTACTCCTTCATCATAGTTTCTGTCTGGCAGCAGAGAAAGATTAGCGTTTACCATTAAGCAGTTAGATAGAAT ...............:xxx.:...x.:.:x--...x................x.x.....xx.:...:...::x::x.:::..:.:x::x.x:.:........:.x...x:...:..x....::--:...x:.:x...:x...:.......:..:....x..xx:...x..x...:..:.. 30M2I92M2I55M 117/177 66.1% 181/94230402 0.0% 4/177 2.3% 124325041 65889514 +3356 chr4 + 190214555 188403562 188403561 188403610 49 CATTCTTTTGTTGTTGTTGTTTTTTGTTGTTTTTTTTTGTTTGTTTTTT chr4 + 94230402 21549961 21549960 21550008 21549961 21549960 21550008 48 CATTCTTTC-TTGTTATTGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT ........:-.....:...............x..x.............. 9M1D39M 44/48 91.7% 48/94230402 0.0% 1/48 2.1% 166853601 23360954 +8961 chr4 + 190214555 188418451 188418450 188419012 562 ATTGTTTTAAATTCCTAGGGACACTTATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTCTTTCCCTACTACCTCCCAAATAAAGAGTTACCTGCTAGGCGCACATCTATCCCACGAATT-TGTCAG-----CTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATAGA--GTATGAAAATTGAAATTAGACACACTTACTATAAAATGTGATGATTATTTCCATTCCAGGACCAAATTGAATTAAAAAAAACTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAG------CAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAGGCCAATAGTCTGTTCATCACAGGTGATAAAGTTTTTTTTTAA-----AGTCAATAAATTACTTTTTACTACAGGAGAAACGTA-TGCTT---------TATATGCCAACAAAGAGTTGAA----ATGCCAGA--AGCAC--TTGAGGACTAAATTACGGAGCACTTATTTCATCACAACAGAACGCTAACGCGGGTGCTTGATTACAACAAGCCATCCAAT chr4 + 94230402 64079206 64079205 64079757 64079206 64079205 64079757 552 ATTGACTGAAAATGCTAAAGACATGTGCACATTATAATTACAGATTTATCAAATTTCTAAAATTATG---------GGTCTTCA-----TATTTCTCAAATAAATAGTTAAATACTGGCTTCATTGCCAGAATACTCATTGTGCCAGAATAGCTCAGTGTAGCAAA-CTGCCAGTTAGGTTTGATTATACAGACTAATTACATGACATGAGCATTGAAATTAGAAATGCATAATGTAAGATGTGATGATTATTTCCAACAC-GGGCTAAATTGGATACAAAAAGCTTTACTGATCTGGAACAGATCACAGTGTTGTACAGTCTACGTTGCTCTGATCTTTTTTCCATCTTGCTAAGCTTGA----AAAAGCT-----------AAGTCTATCCACC--------------TCTTTGTTAAAAATCAGCCAGCAAGTTACTTTTTAC-ACACCAGATGTTTCTTGCTTTTGTTTCAATATGTAGCTACAAGAAGCAGAAGCAGGTGCCAGGCCAGCACAGCTGGGAGCTGGA-TATCTATCTTATATTTTAGCTCTACAAAATAGGAATGTTGGTATTTGATGGCAATGTACAATCCAAT ....x:.x...x.x...::....:x.::.x:..x..:x.xx.x.............::.xx......---------:.....:x-----..::..:........x.....xx.:..:.x:x..:xx.:.xxx:..xx...-..:...-----....:x.x.:...:-.::x......x.:.............x...x..x.--::....:x............x.::.x..x.:...:..................x:x.-..:.:......:..xx.....:x:...:.........x:::..:x..:.x.xx..x::.:.:x.------::.x.:xx:...:::.:x.:x.x.:....----...:...-----------x.....:.:..:.--------------.:...x....-----..:..::..:...........-...xx...x::x.x-.....---------...:.:x.x....::..:x...----:......:--.....--:..:.::..::.-..:xx.x.x:x.....:.x.x.x...:..::xx..:.:x...::.....x:...::x:.x....... 67M9D8M5D51M1I6M5I14M1D35M2I57M1D64M6I29M4D7M11D13M14D10M5I21M1D14M1I5M9I22M4I8M2I5M2I12M1D67M 337/515 65.4% 552/94230402 0.0% 84/515 16.3% 124339245 65875310 +3046 chr4 + 190214555 188435271 188435270 188435359 89 GGTGATAGAGCGAGACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAACAG chr4 + 94230402 65363856 65363855 65363944 65363856 65363855 65363944 89 GGTGAAAGAGAAGGACATCAAAGAAAAATAAGGAAAAGAGGAAACATAGAAAGGAACTGAGGAAGAGACGAAAAAATGATAGGAAGCAG .....x....x::...x:::xx:.....x..::....:.::...x.x......:..xx:..:..:...x:.:....x:.x..:..:... 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 123071415 67143140 +3107 chr4 + 190214555 188435287 188435286 188435358 72 TCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGA--AAACA chr4 + 94230402 54037026 54037025 54037099 54037026 54037025 54037099 74 TCTGGAGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACA ....xx::.....:................:x...:.xx::::..x......x.:::.:........--..... 67M2I5M 52/72 72.2% 74/94230402 0.0% 2/72 2.8% 134398261 55816294 +3664 chr4 + 190214555 188456045 188456044 188456118 74 GTGTGCTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...::.x......:...........::........x.xx.x...x.:........::.:..x.xx:..:..:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 112422841 77791714 +3218 chr4 + 190214555 188458822 188458821 188458891 70 CATGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCCGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....:.x:..--......:...........::........x.xx.x...x.:......x..x.:.. 14M2D54M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 112425625 77788930 +3165 chr4 + 190214555 188496633 188496632 188496682 50 CCTTATCATTTCTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTT chr4 + 94230402 56778491 56778490 56778540 56778491 56778490 56778540 50 CTTTATCACTTATTTTGTTCTTTTTCTGTACCTCTTTCTTTTTTCTTTTT .:......:..x....x..........x.x:..:..........:..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 131718142 58496413 +3447 chr4 + 190214555 188513364 188513363 188513441 78 GGCGTGCCTGTAGTTCTAGCTACTTGGGAGGCTGAGGCAGGAGAACCTCTTGAACCTGGGAGGCAGAGGTTATAGTAC chr4 + 94230402 76033203 76033202 76033280 76033203 76033202 76033280 78 GGTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAAC ..:.::.x........:.........::........x.xx.x...x.x........::.:..x:xx:..:.:...x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 112480161 77734394 +3602 chr4 + 190214555 188547224 188547223 188547293 70 CATGGTGGCACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::....::...:--......:...........::........x.xx.x...x::...........:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 112514027 77700528 +3102 chr4 + 190214555 188585539 188585538 188585603 65 AGAAGAGGAGAGGGGAGGGGAGGGGAGGAAGGGAAAGAAGAGAGGAGAGGAGAGGGGAGGGGAAG chr4 + 94230402 8578584 8578583 8578648 8578584 8578583 8578648 65 AGGAACGGAGGGGGGGGGGGGAGGAAGAGAGGTGAACTACAGAACAGAGCAGGGGGGAGGAGAAG ..:.:x....:....:....::..:..::...x:..xx.x...:x....x..:.......:.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 180006955 10207600 +3960 chr4 + 190214555 188590969 188590968 188591051 83 CATGGTGGTGCACACCTGTAGGCCCAGCTACTTGGAAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGATCGAGGTTGCAG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..::.........:--.....x:...........:.........x:xx.x.:.x.......:.....:..x.:x:..:..:.. 14M2D67M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 112557772 77656783 +3052 chr4 + 190214555 188591966 188591965 188592011 46 GACTCCATGTCAAAAACAAAAACAAACAAACAAACAAACAAAAGTT chr4 + 94230402 42933543 42933542 42933588 42933543 42933542 42933588 46 GACCCTATGTTTAAAAAAAAAACAAACAAACAAACAAAAAAAACTT ...:.:....:x....x.....................x....x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 145658423 44556132 +3353 chr4 + 190214555 188594987 188594986 188595069 83 AGCCTGGGCAACAGAGACCGTGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAGTTTGGTCACCATCCAAGTAAAGAAAAAAGAG chr4 + 94230402 75358304 75358303 75358384 75358304 75358303 75358384 81 AGCCCAAGCAACAGATTTTGTTTCACCAAAAAAAAAAAAAAAAAAGAAACATTCTA--TCTTATAAAGGCAAGGAAAAGAGAG ....:::........xx::..x..x....................:...x.x.:.:--:x::..xx.:.:..:.....:.... 56M2D25M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 113236683 76977872 +3178 chr4 + 190214555 188595012 188595011 188595068 57 CCAAAAAAAAAAAAAAAAAAAAAAAAGTTTGGTCACCATCCAAGTAAAGAAAAAAGA chr4 + 94230402 64513250 64513249 64513306 64513250 64513249 64513306 57 CCAGAAAAAAAAAAAAAAAAAACATAGTGTTATCTCTAAACAAATAAAAAAAAAAGA ...:..................x.x...x.x:..x.:.xx...:....:........ 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 124081762 66132793 +3033 chr4 + 190214555 188655629 188655628 188655697 69 AAAATATTCCTTCTGCCTTGTTTTCCTTTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGT chr4 + 94230402 8296015 8296014 8296080 8296015 8296014 8296080 66 AAAATAGTTTCTTTGTTTTGACTTCAATTTTCCTTTTTCTTTCTTTCTTTTCTTTTTT---AATGAAGT ......x.:::.:..::...x:...xx..:........:...:...:....:......---:...:... 58M3D8M 48/66 72.7% 66/94230402 0.0% 3/66 4.5% 180359614 9854941 +3423 chr4 + 190214555 188673369 188673368 188673448 80 AACTCCAGCAGACCTGCAGAAGAGGCGACTGACTGTTAGAAGTAAAAACTAACAAACAGAAAGTAACAACAACAACAACA chr4 + 94230402 54680667 54680666 54680735 54680667 54680666 54680735 69 AACTTCAGC-----TGCAGGAAAGGAGATTAT------GGTGTAAAATCTAACAAACAAAAAGTAACATCAACAACAACA ....:....-----.....:.:...x..:.:x------.:x......x..........:.........x........... 9M5D18M6D42M 57/69 82.6% 69/94230402 0.0% 11/69 15.9% 133992702 56221853 +3194 chr4 + 190214555 188681677 188681676 188681740 64 TGTAGTTCCAGCTACCTCAGAGGCTGAGGCGGGAGAATCACTTGAGACTAGGAGGTTGAGCCTG chr4 + 94230402 76033211 76033210 76033274 76033211 76033210 76033274 64 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTG ...............:.x.:........x.xx.x...x.......:x.:..:..x..x:.x... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 112648466 77566089 +3256 chr4 + 190214555 188681719 188681718 188681872 154 TGAGACTAGGAGGTTGAGCCTGCTGTGAGCCGGATGGTGCTACT------GCACTCCAGCCTGGGTGGCAGAATGGACCCTGATTAAAAAACAAACAAACAAAAAAGATGTATCAACATTAGCCACTCAGACATTGTTTTAAAATAGTTTAATCTTCTAT chr4 + 94230402 61374570 61374569 61374722 61374570 61374569 61374722 153 TAAAATTAGGCAGTT---CTCCCTGTGAGCTTGCCGATTCCAACTTGAAAGTACTACAG----GGAGATGGCTGGAACCTTGTTAAAAAAACAAACAAACAAAAAAAAAACACCAAAAAAAGTAACTTTCCCTTGTTTTAAAAACAGTTTCATTTACTGT .:.:.:....x:...---.::x........:x.x:.:.x.:.x:------.:...x...----..x.:::.xxx.:...:..x.x.....................:.x::.:...x.xx..:x...:xxx.x.xx...x....:.....x..:.x..:. 15M3D26M6I9M4D97M 94/147 63.9% 153/94230402 0.0% 13/147 8.8% 127307149 62907406 +3411 chr4 + 190214555 188686419 188686418 188686507 89 AATAATATAGATTAAAAAAAGTGTCACATGGTTTTAAACACACACACACACACACATATATATATATATATATATATATATATATATTT chr4 + 94230402 74526048 74526047 74526125 74526048 74526047 74526125 78 AATATTGTAGATTGAAAAA-----CAC------CAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTT ....x.:......:.....-----...------:x.:.:x..............::x.:...:.:.x.......::.......:..... 19M5D3M6D56M 60/78 76.9% 78/94230402 0.0% 11/78 14.1% 114160371 76054184 +3228 chr4 + 190214555 188686445 188686444 188686502 58 CATGGTTTTAAACACACACACACACACACATATATATATATATATATATATATATATA chr4 + 94230402 59002964 59002963 59003021 59002964 59002963 59003021 58 CATGATGTTAATCACACACGCACGGATAAATATGTAAATATACATATGTATATAAATA ....:.x....x.......:...:x.:.x....:..x.....:....:......x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 129683481 60531074 +3694 chr4 + 190214555 188690483 188690482 188690556 74 GTGCTCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGATGGAGGTTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....x.x..................::........x.xx.x...x::........::.:..x.xx:..:..:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 112657279 77557276 +3019 chr4 + 190214555 188708546 188708545 188708604 59 GCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAAGGCCAGAACCCGGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.x......:...........::........x.xx.x...:x:.:x......:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 112675340 77539215 +3094 chr4 + 190214555 188725757 188725756 188725799 43 GTGTGTGTGTGTATATATATATGTATATACACACAC-TTGTATT chr4 + 94230402 60168504 60168503 60168547 60168504 60168503 60168547 44 GTACGTGTGTGTATGTATGTATGTATATACACACACTTTGTATT ..::..........:...:.................-....... 36M1I7M 39/43 90.7% 44/94230402 0.0% 1/43 2.3% 128557253 61657302 +3189 chr4 + 190214555 188746671 188746670 188746742 72 CCCATCTCTACTAAAAAAAAAAAAAAAAAAAAAAAACAAAAATTAGCTGGGAGTGGTGGCACGTGTCTGTAG chr4 + 94230402 71844816 71844815 71844887 71844816 71844815 71844887 72 CTCCTCTCCATTAAAAAAAAAAAAAAAAAGAATGCTCAAAAATAAACTGCAGTTAATGGAACGCCTCCATAG .:.x....:.:..................:..x:xx.......x.:...x::x.::...x...:x..::... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 116901855 73312700 +3053 chr4 + 190214555 188763925 188763924 188764004 80 TGTATACACACGTGTATATATACACATATGTATACACACACGTATATATACATATGTACACACACATATATACACATATA chr4 + 94230402 58675366 58675365 58675445 58675366 58675365 58675445 80 TGTATTTGAACTTGGATCTCTACACATCTTTGTATGCATATATATACACTCATATGTGCACACACACTCAAATATATTTA .....x::x..x..x..x.x.......x.x.:..::..:.::....:.:x.......:........:x:.x.:.:..x.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 130088559 60125996 +3666 chr4 + 190214555 188763947 188763946 188764021 75 CACATATGTATACACACACGTATATATACATATGTACACACACATATATACACA-----------TATATGTATACACACGTATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGTTACATGAATAAATATATATAT ..::.:.....:.......:.x...:x...............:.:.:.:.....-----------..:...x...x.:.::..... 54M11I21M 57/75 76.0% 86/94230402 0.0% 11/75 14.7% 165516226 24698329 +3332 chr4 + 190214555 188764023 188764022 188764113 91 CACATATGTATACACACGCATATATACATATATGTACACACACATATACACATGCACACACACATATATACACATGTATACACACGTATAT chr4 + 94230402 23247721 23247720 23247806 23247721 23247720 23247806 86 CATGTGTGTATGCACACACATTTATGAACATATGTACACACATACACACACACAAGGAAAAAAGT-----TACATGAATAAATATATATAT ..::.:.....:.....:...x...:x.:.............:.:.:.....::x:x.x.x.x:.-----:.....x...x.:.::..... 65M5D21M 59/86 68.6% 86/94230402 0.0% 5/86 5.8% 165516302 24698253 +3457 chr4 + 190214555 188764045 188764044 188764118 74 TATACATATATGTACACACACATATACACATGCACACACACATATATACACATGTATACACACGTATATACACA chr4 + 94230402 56867291 56867290 56867363 56867291 56867290 56867363 73 TATACATAT-TGTGTGTGAATACATACACATATACACCAATATATTTGTGCATGTATATACAAGTATGTACACA .........-...:::::x.:.:........::....xx.:....x.:::........:...x....:...... 9M1D64M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% 131896754 58317801 +3104 chr4 + 190214555 188764104 188764103 188764162 59 ACACGTATATACACATATGTATACACACATATACACATATGTATACACACATGTATACA chr4 + 94230402 66642212 66642211 66642270 66642212 66642211 66642270 59 ATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA .:..........xx....x:......xx..:..:.:.....x...::.....::..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 122121892 68092663 +3138 chr4 + 190214555 188764145 188764144 188764254 110 TATACACACATGTATACACATATATACTCATATGTATACACACATATACACATATGTATACACACATACACATATGTATACACACATATATACATGTATATGCACACATA chr4 + 94230402 21109194 21109193 21109301 21109194 21109193 21109301 108 TATACATGTGTGTCTCTGTGGGCGTATTTATATGTA--CTCACATATACTCGTGTACCTATACGTATGTACTCATGCTTCTGTGTATATGTGTATGAATATGCATGCACA ......::::...x.x::::x:::..:.:.......--.x.........x.:.:.::x..:..::..::..x:...:x.x:::::....:.::...x.......::..:. 36M2D72M 63/108 58.3% 108/94230402 0.0% 2/108 1.9% 167654951 22559604 +3278 chr4 + 190214555 188764159 188764158 188764218 60 TACACATATATACTCATATGTATACACACATATACACATATGTATACACACATACACATA chr4 + 94230402 66642211 66642210 66642270 66642211 66642210 66642270 60 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATACA ..:..:........x....x:......xx..:..:.:.....x...::........:.:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 122121948 68092607 +3005 chr4 + 190214555 188764258 188764257 188764331 74 ACATATGTATACACATATATACACATGTATATGCACACATACATACACATATGTATACACACATACACATATGT chr4 + 94230402 22600198 22600197 22600271 22600198 22600197 22600271 74 ACACACATATTCACATGCAAACACATGCATACAAAAATATGTATATTTGTGTGTGTATATGCATGCACGTAAGT ...:.::...x.....::.x.......:...::x.x.:..::...:x::.:...:..:.::...:...:..x.. 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 166164060 24050495 +21012 chr4 + 190214555 188809562 188809561 188809976 415 TAAGTAACTTGTTATGCTTTCTTCTT-ATTACTGAAAT--CATGCTTAATATTTGATAGACTCTATCTATGGCAAATACTCCATATGGCAGCAAAGATCCATTCCTTCATTTGTGTT-GTTAAGACTGGAAATGCCATTTCAAGTGTACGCACTAAGGTTTATAGCACAATAAAGATTTATTAAAACCACTCCACAGAGCCACGTTGTACAGAATTTATGAACTGTAAAACTGCTATAAAGGTCACTTGAGATGCAAAAGTTTAATTTGGAATATCATGTTATGGTACAGAATTGCTGCATTCAATGCTTGTTAATATAAATGGTTTAAAGATATTTGTCTCAGTCTGTGAAGTTTATGAACTTCAACAAAAATAATTTCATATTTTATAATATTT----TACATAGATTTGATTTCTTTAAA chr4 + 94230402 64210569 64210568 64210985 64210569 64210568 64210985 417 TGAGTTACTTATGGCATTTCCTCCTTCATTGCTGGAATATTCTTCTTAATATTTCATGAACACT---TAAACAAAGTTCTCCATATGGAACAGGGGAATCATTCCTGAATTTGTGTTTGTTAGGACTGGAAATGCCATTTCAAGTATGTGTTATAACACTTACAGCACAATCAAGATTTATTAAAACTACTCCACAGAGAACTATTGTAAAGAATTTATGAACTGTAAAACTGCTATAAAGGTCATTTGAGATGCAAAAGTTTAATTTGGAGTATCATGTTATGGTGTAGTACTGCTAAACTTAATGCTTGTTTAAACAAATGGCTTGAGGATATTTGTTTCAGAATGTGGGGTTTATTAACTTCAGTAAAACAACTT---TATTTTATCTTTTTTTTCCTGCTTAGCTTTGATTTTTTTAAA .:...x....:.x::::..:..:...-...:...:...--:x.x..........x..::..x..---..x:xx..:.x..........x.xx:::..x:.......xx.........-....:......................:.::.:xx...x::...:........x...............:...........xxx::.....x...................................:.........................:..............::..x.:....:x.:.:..........x.x.:......:..:.:.........:....xx....::......x.......::....xx.x..---........xx.x...----.:.x...x........:...... 26M1I11M2I24M3D50M1I260M3D15M4I23M 321/409 78.5% 417/94230402 0.0% 14/409 3.4% 124598993 65615562 +3123 chr4 + 190214555 188811849 188811848 188811906 58 ACATATATGTGTGTGTGTGTATGTGTAGATAGATAGATACACTAAGAGGTCTATGATT chr4 + 94230402 29797141 29797140 29797198 29797141 29797140 29797198 58 ATACATACGTATGCGTGTGTATGTGTAGATATATATACACACAGAGAAATTTTTGCTT .:.:...:..:..:.................x...x.:....x:...::.:.x..x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 159014708 31199847 +3074 chr4 + 190214555 188829933 188829932 188829978 46 CTCAAAAAAATAATAATAAAAATAAATAAATAAATAAATAAATAAA chr4 + 94230402 73948130 73948129 73948175 73948130 73948129 73948175 46 CTCAAAAAAGTAAAAATAAAATCAATCAAATAAATAAATAGATAAA .........:...x.......x:..x:.............:..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 114881803 75332752 +3074 chr4 + 190214555 188829933 188829932 188829978 46 CTCAAAAAAATAATAATAAAAATAAATAAATAAATAAATAAATAAA chr4 + 94230402 73945757 73945756 73945802 73945757 73945756 73945802 46 CTCAAAAAAGTAAAAATAAAATCAATCAAATAAATAAATAGATAAA .........:...x.......x:..x:.............:..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 114884176 75330379 +3147 chr4 + 190214555 188867788 188867787 188867859 72 TTCTCCCTTTTCTTTCTTTTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCT chr4 + 94230402 49829856 49829855 49829927 49829856 49829855 49829927 72 TTTGCCCATTTCTTTCTTTTTTTCTTCTTTCCTTCTCTCCCCCCCCCTCCCTCACACACACACTTTGTTTTT ..:x...x.............:::.:..::.:::...:.:...:.........x.x.x.x.x...:x..::. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 139037932 51176623 +3164 chr4 + 190214555 188906137 188906136 188906198 62 CCGTCTTCCCTTCCCCCTTCCTTTCCTCCTTCCTCCTCCCTCCCTTTCTTCCTTTTTTCAAA chr4 + 94230402 82545436 82545435 82545497 82545436 82545435 82545497 62 CCAGCTGACCTTCCCCCTTCCTTTCCTCTCACCTCCTCCTCCCTTTCCTCATCCTGCTCAAA ..:x..xx....................::x........::..:..:..:x:::.x:..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 106360701 83853854 +3172 chr4 + 190214555 188909573 188909572 188909683 111 ATGGTGACACATGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCACGAGAATCGCTTGAGTCCAAAAGGTAGAGGTTACAGCTGAGATCACGCCAC---------TGCCCTACAGCCTG chr4 + 94230402 76033198 76033197 76033312 76033198 76033197 76033312 115 ACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG--AACATGATGCCAAGCAGATGTGTGCCCTA-AGCCTG .::...:::..:.--....:.::..........::........x.x:.x...x.:.....::...:...x.xx:..:.::..--:.x..x.:....x---------.......-...... 13M2D67M2D13M9I7M1D6M 74/106 69.8% 115/94230402 0.0% 14/106 13.2% 112876375 77338180 +4213 chr4 + 190214555 188920452 188920451 188920530 79 GTGGTGCATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGTCTCAAGAATCGCTTGAACCCAGGGGCTGGAGCTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ........:.--..................::........:.:::x...x.:...........::...xx:.x:..:.. 10M2D67M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 112887251 77327304 +3017 chr4 + 190214555 188952360 188952359 188952429 70 AAAAAAAAGAAAGAAAATAAAAGAAGGAAGGAGGAAGAAACAAAAGATGAAAAAAGAATGGAAGAAAGAA chr4 + 94230402 54037031 54037030 54037100 54037031 54037030 54037100 70 AGGAAAAAGAAAAAAAAAAAAAAAAGTGAAGGTTGAGGAGTAAAAGATAGAGAGAGAAAAGATGAAACAA .::.........:....x....:...x:.:.:xx:..:.::.......::.:.:....x:..x....x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 134915329 55299226 +3314 chr4 + 190214555 188952366 188952365 188952430 65 AAGAAAGAAAATAAAAGAAGGAAGGAGGAAGAAACAAAAGATGAAAAAAGAATGGAAGAAAGAAA chr4 + 94230402 55084855 55084854 55084919 55084855 55084854 55084919 65 AAGAAAGAAAACAACAAAAAAAAAGAGAAAGATGTTAAATATGAAAAAATAACTGCAAAAAGAAA ...........:..x.:..::..:...:....x::x...x.........x..:x.x.:....... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 133867511 56347044 +3004 chr4 + 190214555 188961716 188961715 188961775 60 TATACTTGTAATACTAGCCACTTGGGAGGGTGAGACCAGAGAATTCCTTGAACCCAGAAG chr4 + 94230402 76033205 76033204 76033264 76033205 76033204 76033264 60 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::..x....:.x.:...:.....::...x....x..x.x...x:x.............. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 112928511 77286044 +3657 chr4 + 190214555 188965757 188965756 188965869 113 TTTGTTATCCTAAAGG-GAGTTTTAGTGACAAATC-----ACTTAAAGTAGCTTTTTGATGTTGCAAGTGTTTT-TATTTTTGTTGTTGTTGTTTGGTTGGTTGGTTTGGTTCATAAGTA chr4 + 94230402 77840930 77840929 77841047 77840930 77840929 77841047 118 TTTTTTATACAGAAGAAGAGTTTTAC--ACAGACCTGGATACTTAGATCCACTTATGTTTGTGGTAGGTTTTTTCTTTTTTTGTTGTTGTTGTTTGGTTGGTTTGTTTTGTTGATGATTA ...x....x.x:...:-........x--...:.:.-----.....:.x:x:...x.xxx...x.:.:..x....-.x..........................x....x...x..:.x.. 16M1I9M2D7M5I34M1I45M 84/111 75.7% 118/94230402 0.0% 9/111 8.1% 111124827 79089728 +3077 chr4 + 190214555 188986752 188986751 188986806 55 TTTGGCCTTCTAAAATCTTTAACTTTCTAGAATGCAACTTTTTTTTTTTTTTTTT chr4 + 94230402 32319090 32319089 32319144 32319090 32319089 32319144 55 TCTGTTTTTTTAATCTCTGTAACTTCCTATAACCCAACTTTTTTTTTTTTTTTTT .:..x::..:...xx...x......:...x..:x..................... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 156667662 33546893 +3161 chr4 + 190214555 188992166 188992165 188992224 59 GCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGAACCCCGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:.........::::........x.xx.x...x.:.:.......x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 112958960 77255595 +3029 chr4 + 190214555 189026942 189026941 189027008 67 CACTTTTCTAAACCACTAAGCCACTTTTAAACTTTTTCCAAAACAAAAAAAAAGTTTTTTTCTCAAT chr4 + 94230402 6996527 6996526 6996593 6996527 6996526 6996593 67 CATCTTTTTAAACTACTAAAATAAAGGGAAAATTTCTTTAAAAAAAAAAAAAGGTTTTTTTCCTAAT ..::...:.....:.....:x:.xxxxx...x...:.::....x........:.........::... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 182030415 8184140 +3054 chr4 + 190214555 189048529 189048528 189048600 72 GCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 + 94230402 23104867 23104866 23104938 23104867 23104866 23104938 72 GCTAGGCTTGTTCTTTTTTTCCTCTCTCTCTTTTTTTATTTTTTATTTCTTGGTAGATTTGATGCAGACTCT .....::..x..:.......::.:.:.:.:.......x......x...:..xx.xxx.....x:.:..x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 165943662 24270893 +3281 chr4 + 190214555 189048533 189048532 189048602 70 GATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTG chr4 + 94230402 73036148 73036147 73036217 73036148 73036147 73036217 70 GATTTTTGTTTCTCTTTTTTTTTTTTTCTTCTGGCTTTTCCACTTTTGTTGTGCTCAAGACAGGGTCCTG .......x...:.:.............:..:.xx:....::x:....x..x.x:.::....:.:...:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 116012385 74202170 +3542 chr4 + 190214555 189072269 189072268 189072357 89 ACATTTATAAATATATAATTA-------------------CTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCTGGCTGAAG chr4 + 94230402 65137669 65137668 65137771 65137669 65137668 65137771 103 ACatatatatatttttaattattatttaaGTTACTTTGACCCTTTCCCTGTTTTTCTACCTTTTTTTTTTTTTTG-----GATTCTTGCTCTTTCCCCATGACTGAAG ....x....x..x.x......-------------------.:....::.x:......x::...............-----..x.........x.....x..:...... 21M19I35M5D28M 68/84 81.0% 103/94230402 0.0% 24/84 28.6% 123934600 66279955 +4900 chr4 + 190214555 189128324 189128323 189128481 158 AAAAATTAGTACATATCC---CTTTCATTTAAATATTGCTAA------ACAAGTCAAATTGCCTTTTATTTAATCAATGAACCAAAATGATTTGAAATAGCAATATCATAAAGCTTTGCTGAGCAAGTGTTAAATCCATTTTTTCCAAAGCAATAAGCATACACACT chr4 + 94230402 64333209 64333208 64333374 64333209 64333208 64333374 166 AAAGATTTCTGAATATCTTCACATCCATTTAAACAAAGCAAAGATAAAATAAGCTAAACTGTCTTGTACTTTATAACTGAATTAAATTGATTTGAAATAGCAATTTCCTAAAGCTCTAAAGAACCAATG-TAAATCAATTATTACAGATGAATGAAACTCACAAACT ...:...xx.:x.....:---.x.:........:.xx..x..------.:...::...:..:...x..:..x..x.x....::...x.................x..x.......:.:xx..:.x.:..-......x...x..x.x:.x.x.xx..:.x:...x... 18M3I21M6I81M1D37M 110/157 70.1% 166/94230402 0.0% 10/157 6.4% 124795115 65419440 +3036 chr4 + 190214555 189129894 189129893 189129959 66 AAAAGGATATATATATATATATATATATATATATAAATATATATATATAAAAATATATATATATAA chr4 + 94230402 58988595 58988594 58988660 58988595 58988594 58988660 66 AAAAGAAATTATATATATATACACACATGTATATAAACATGTCTCAATAAGCATTTATAGCTATGA .....:.xx............:.:.:..:........:..:.x.xx....:x..x....xx...:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 130141299 60073256 +3098 chr4 + 190214555 189129989 189129988 189130046 58 TATATATATATAAAAATATATATATATAAATATATATATATAAATATATATATATATA chr4 + 94230402 66642211 66642210 66642268 66642211 66642210 66642268 58 TATACGTATATACTAATATTCATACACCAATGTATATATATGAATATGCACATACATA ....::......xx.....x:...:.:x...:.........:.....::.:...:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 122487778 67726777 +3291 chr4 + 190214555 189147911 189147910 189147992 82 GTGGTGGCACTCACCTGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGCATCACTTGAACTCAGGACGCTGAGGTTGCAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ......-----...x......:.........:.::..:.....x.xx.x.x.x.........:...:.xx:.x:..:..:.. 6M5D71M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 113114710 77099845 +3084 chr4 + 190214555 189169853 189169852 189169934 82 ATATATATATATATATATATATTTTTTTTTTTTTTTTTT---------------TTTTTGAGATGGA---GTCTCACTCTGTCGCCCAGGCTGGAGTGCA chr4 + 94230402 24792626 24792625 24792722 24792626 24792625 24792722 97 ATATATATATATATATATAGGTTTTTTTTGTTTTTTTTTCAAAATTGCATTGGATTTTTGGAGTTGATCCATCTCAATCTCAATCCC---CTGGAATGCA ...................x:........x.........---------------......:::.x..---:.....x...xxxx...---.....:.... 39M15I13M3I17M3D10M 65/79 82.3% 97/94230402 0.0% 21/79 26.6% 164377227 25837328 +3001 chr4 + 190214555 189175833 189175832 189175875 43 ACACACACACACACACACACACACACACACACGTGTATATACA chr4 + 94230402 46140856 46140855 46140898 46140856 46140855 46140898 43 ATATATATACACACACTCTCACATACACACACGTGTATATACA .:.:.:.:........x.x....:................... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 143034977 47179578 +7019 chr4 + 190214555 189176280 189176279 189176662 383 CTGCCAACCGAAGGTAAGGATCAGTATTCTCACAGGTTAAGAAAAGTACCTTTGACGGTATTTTTACAAAGTTCTGTAATTCAGTATTTCCTTCAGCTCAGTGGGCATGATGGTGTCGGTTGAGACTTTAAAGATGTTATTGTCAAAATCATTTTA------CTTCTCATAAAGAAGCATTTTGCCTTATCAATTTCAGAGTACAGGTTCACTGGCTGCTTTGAAATGTTGTTGAAATGTAAGAGACTACAAGCAACTATACTAATCAGTATGCAATTGCTACACCAAAAATGCATGAGTTTTTCCATGATTCCTCTT-TCTAGTAATAATTAATTACCTAGTGGGTTTAT--------TTATTTAGAGTTTTGAGGA---TTGCAAGTATGTTTCTTTTT chr4 + 94230402 64351655 64351654 64352043 64351655 64351654 64352043 389 CTGCCAATCAGAGACAACAGCTAGGGTTTCTAGAGGAAAAGACAGTT--CTCTCCTGATATTTTCATGATGCTAGAGAACTTAGGATCACTTTTCATTAGCTGAACTTGAGGGTGTAATTTGAGCTTTTAGAAAA--------CGAAGTCTTATTAGGCTGGATTCT-ACAAAGAGCTGTTTTGCATCACTGAATCTCCATTAAAGGTCAACTGACAACTCTGAAGTGTTGGTGAAAGAGAAATCATTAAAAGTAATGTTATTGATCAATGTGTAATTGTCCCATT-AAAATTCATGAAGTTACCAATGATTGTTCTTCTCCAATAAAAATAATTTACTAGGTGAGTGTGCATTTGATGTCATATCATACTTCAGGGAATTTTACAAGCATTTTCCTTGTT .......:.::..::..x::::..x:..:::.x...xx....x.:x.--..:.xx:.:......:.::.x.:.xx:x..:.:..x..:x.:..:x::.x:x..::.x...x.....x:x.....x:....:.:.x--------.:..:..x.x...------x....-.:.....:x::......x.:.:::.x.::xx.x..x....:x....:.x:..:....:.....x.....x:x..:xx.:..x...:..:xx..:.:....:.:..:.....::x..::-.....x.....:x..x:.x......x:....-..:.:...x...x.x....:x:...:..x.::--------.:..x.x:x::..:::...---..:....:..x..:...x.. 47M2D86M8D13M6I5M1D118M1D31M1I32M8I19M3I20M 224/371 60.4% 389/94230402 0.0% 30/371 8.1% 124824625 65389930 +3043 chr4 + 190214555 189210697 189210696 189210739 43 CAAAAACAAACAAACAAAAACAAAAACAAACAAAACAACAACA chr4 + 94230402 39912623 39912622 39912665 39912623 39912622 39912665 43 CAAAAACAAACAAACAACAACAACAACAAAAAAGACAACATCA .................x.....x......x..:......x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 149298074 40916481 +3855 chr4 + 190214555 189228578 189228577 189228647 70 CATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..::........:.--....:.:...........::........x.xx.x...x.:...........:.. 14M2D54M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 113195381 77019174 +35094 chr4 + 190214555 189304784 189304783 189306316 1533 TCTCTCTGCCTTCTATGTATCGTGA-----GTTTTGAAAATGCACAGGGACTGGAATCCTTTTGCTACCAAACATATTGGAAACTCACAGACGTGATTATACTTCGTGGTTTTATGTGTTTTATCAGCCAGTGACATCATGACAGATGAGAATGTTCTGCCAAGAAAAGTCAAGATTTCCTAACAGTCAGGTATTCACAGACAAATCACATGAACTGTCATTTAATCTAAACAATGATTTGAA----CATAATCCAGACCCAAAGCAGAGAAAAAAATATCTCAACTGCCAAGCTTATTATAACAAGACATTTGATCCAGAG-AAAACACTGTTGGGAGTT--ACAAACTACTAAAGGTTAAATAGAATCCTTTGATAT--ATATGGCAGGAATATGTTCTTTT-GTTTTTCTATTACTATCTCATCTGATGAAGCATCAAACATCTCACTGGG-AAAACAGAAAAAAAACCCTAGTA-AATACTATGTTGCTTTTAATGTTC--TTTTATCTGTGAATCACGAAAGTAATGCAGCAATAATTAAATGAGTT-GAGTGGTGTGTGCAGAAAACAGAGCATTCTTCCAAAACTGCTTCTTTGAGAGAGAAAAACTCATGGATTAA-TGTGTCCAAGGGGAGATTAAAGCAAGTC--CACAGAGTTGCTCTGAGACAAATAGGTATTACACTTCACAAGAAAGGGCTTTTTATCAAGCATAGTTGTTTAGATAAAGTACAATCAA-CAAATATAAA-CTGGATATGCACTGCACAATTTTTCTATTAACACTGGGTTTTAATCTTTAAAGATCA--CATTGAGTAACAATTTCCTTAAAAGCCACACTCTGTGGACAATTGCCTAGAAGAACAATGACCCAATCCTCATAAATTGTGTTTAATAAAAAGCAGAATAAGCCA-TGATTG-----GATTATTTATGAGACATTGAAGAGCAGCTGCATG----GTGC-----TCTAAATGGGTTCCGCCTCCAGCAGTTGTCGAGACCAGATGGGAAAGTGACAAGCTCCACTTAATATGCCACAGCATCAGCGTGGTCATAAAAGAGTCCACAGCAATTCTCTTTTGAACAGAAGCCACCTGTTTACTATAAACACACCTTCTCTTTCTCAAACTGTACTTTTAATTTTCAACTTGCACCTGAAAGGTAGCAACCCTTCAAGTTCAAATTGCCAGGCT--GCAAATCAATCATGAGTGTTTGAGGAGTTCA--AATCTCTGTGGCAGAATTTGGACAGTTTTAAAA-CTTTAATGTGTCCAAAGCTTGGCTGTAAATGATCCAATA---CATCTTCTCTTAAAAGGAGATTTTGTCATAATTATAATTTCAGTTGGCATTTTTTTTGGCTCTTGCTTAATTATAAAACTATGCTTATTAAAAACAGACTCTTTACTCCTTTGGTTATTAGAAACAG--ATTCATTATGCCCTCTACTTTATCTCAGCATACGTGATCTATGATGGAAAACCAAAGATTTGGCTCTGGCCTGTAGCTATAACTT--------CTTCACAAAAAGAAAGACTATGTCACCTGGCATTTGAGGCCCCTTGCTGTTCATT chr4 + 94230402 64392083 64392082 64393579 64392083 64392082 64393579 1497 TCTCTTT---TTCTATGCAGTGTGCAACTTGCTTTGAA----TTCAACAGCTAGTAGCCTTTTATTGTCAA-CATATT----------AGATATCATTATAACTAAGCACATGAATAGTTTTATTATCCTGTCACATCATGACAGATAGATAGGTTTTGTCAAGGGGAGTCAAAATCTTCTACCGCAAAGTCAATCTTAGGCAACTTATATGCACC-TAATGTCTTCCAAAGGGAGTGTTAAATGCACGCAACACAAACCCAAGGTAGACAAACAA------------CCCAGCTCACTGCAGTGAAACACTTGATGCAGAGCAAAACAATAACTGAAGATTAACAGCCTATTAAAAATGAAATCAAGCTATTAGAAGCCAACAAGCATGGGAAAGGTTCTTTTTGTCATTCAGCTACTATCTTATTTGATGTCGCATTAAATTGCCCATTGGGCAAAGCATTGAAAAA---CTAATATGGGAATGTCTTGTTTATAATGTTCACTTTCATCTTCGAATTACAAAAGCAGTTCATCAATAACAAAACCAGTTTAAATGATGTATGAAGTGAACACAGCATTCTGCCACAACTGCTTCTTCCAGATA---AGACCCAAGGATAAACTGCATCCACAGGGGAACAAAAATAAGCCACCACTGGGTTCCAC--AGGCGAA-AAGCATTTTACTTAGCATGAA-GGACTCTTTATCAAGTGCAGTCATTCAGATAAATTATAATCAGGCCAAAATAAGTCCTGATCTGTACTTTACAATTTTCCCATTAGCCCCAAGTA--AGGCTTTAAAGTGCTGTAATTTGATAACAAGTTCTTTAAATGCCATGCAATGCATACAATTTTCTCCATGAACAATGACATGATTCCCCTAGAAAG-GTTTAATAAAA--CCAAATGAATCAGTGGTTTCTGTTAGTTATTTATGAAACATT-CAGAACAGCTGCAAGAAATGTGCAACTTCCTAAACGGGTTCTGCCTCCAGCAGTTGTGTAGACCAGATGGGAGAATGACAAGCTCCACTTAACATGTCACAGCATCAGCTCAATCATAATATGGTACCAAACAAATCTCCTTGGAACAAAAGCCACCTGCTTACTATCAATACACCTTCCATTTCTCCAATGGCAACTCTAATCTGTGA--TGCTACTAAAAGA-AGTACCCATTCAACTGCACAAAGCAACCCTCAGTAAATTGGTTTCCTGTGAAAAAGTAATGCCTTACTCTTTATAGTCAACCTCAGGCAGTTTTAGAGCCTTTCATTTAT--AAAGCTTGCTTGCAGATTAGTCAGTGTACCATTTTCCC----AGTGAGAATTTCCCAGGTCAATTATTCCAGTTTGCATTTGGTTTCTCTTCAACTT----------------TTATTCAG-------------------TAGTTATTAGAAACAGAAATCTGCAATGCCTTCTGTTTTACCTCAGTGCCAGAGCACT-TGTCTGAAAGCCTCAGATCTGATTTCTGCCTGCAGCCATTATTTTCCCTACACTACACAAGAATATTTg-tatgtcactccgaaagtaatgcc---tactatttatt .....:.---.......:.x:...x-----.:......----:x..:x::..:.x.x......::.::...-......----------...::.x......x:.x:xx::x.x.xxx.......:.x..x..x..............:::x.x...:..:....:::......:..:.:...x.:xxx..x:.x..x:..:...x.:.:...x..:-.x..x.xx..:...x::x.xx..:..----.::..:x..:......:.:...x...x..------------..x....:.:.::.:::.:...:.....x.....-......x.:x:x.:..x.--...:x...:....::.x....x:.:::x..x..x::--.:.x.xxx..:.x.x........-..:x...x::........:..:.....xx....:...:xx.:..:....-...:..xx:.....---...:..-::x.x.:.x...:..x........--...:....x:....:..:....:.:.x..x......:x...:x....-:.:..:...:..x..x:....x........x...x...........:x...x.---.:..:..x....x..-..::....x:...::.:x...::...:.--...x.:...x.x.--..:.:..-.:.:...x:....x:..x...-..:..:.........:::...::..:.......x..:.....:-.x..x....:-.:x...x..:...x:........:.:....:.x.:::..x--.:x........xx.x--x...x::......x...:.....x....::.xx..::x......x:..xx.x..........x::..:.:.x..:.xx.-...........--.x:...:.::..-..:..x-----::..........:.....-x...:........x.----....-----:.....:......:...............xx.............:.:.................:...:............x:::......x.x:..x.xx.:...x....:..x.....:..........:.......x..:........:x......x..:x.:.x:.:....:.x::.--...xx..:....:-..:.x..x.....x.x..x.xx..x.xx..--.:....:::.:x:xx...xxx:..x.:.x.x--.x...:.:.:.:x:.x:.::.:........:.:-....x..x.:.--........x:..:.:..x.x:..:.:---...:...:.----.:x....x...x:..x:x:x..x...:.....x......xx...xx..::x:...----------------.....x.:-------------------.:..............--..::::x.....:...::....:.....:::xx.x.xx..-..x:x....:..xx....:..::.::x.....:...:..x.:..--------..x.....:..x.xxx:-........::x.x.xx.:.x...---.:..:..:... 7M3D15M5I8M4D29M1D6M10D128M1D26M4I29M12D34M1I18M2I36M2I23M1I49M1I14M3D6M1I24M2I47M1I53M3D15M1I28M2I13M2D7M1D21M1D43M1I10M1I40M2D15M2I79M1D11M2D12M1I6M5I18M1D15M4I4M5I181M2D13M1D30M2I31M2I33M1I11M2D26M3I9M4D55M16D8M19D16M2I40M1D44M8I17M1D23M3D11M 975/1437 67.8% 1497/94230402 0.0% 156/1437 10.9% 124912701 65301854 +3055 chr4 + 190214555 189346556 189346555 189346616 61 GTAGAATTTTTTTTATGTCTTTTGTTTGATGTGCAGGGGGATTTTTTTTTATGTATATGTG chr4 + 94230402 44646915 44646914 44646975 44646915 44646914 44646975 61 GTTGAATTTTTTTTGTTGTTGTTGTTTGCTTTTTTGGTGGATTTTTTTTTACGTGTGTGTG ..x...........:.xx:.x.......x.x.x:x..x.............:..:.:.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 144699641 45514914 +3178 chr4 + 190214555 189362535 189362534 189362612 78 ACACGCACTCACACACACATACACACCCACATACACACACACGCACACACACCACACATACACACGCAGACATACGCA chr4 + 94230402 10735850 10735849 10735927 10735850 10735849 10735927 78 ACATGCTTGCACACACACATCCACATCCACGCTCACACACTCCCAGATGTGTCTCACATGCACACATTCATTCACGCA ...:..x:x...........x....:....::x.......x.x..x.:::::.x.....:.....::xx.:x:..... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 178626685 11587870 +27865 chr4 + 190214555 189372682 189372681 189373959 1278 AAGTAAGAATTTTGGGGAAAAAACACTTTTGCCTAGAAAAGCATATTCCATAGAGGACAGATGGAAAGGATATTTGTGTTTAATTTAAATGT---TCTGCAAAAGTTCACTCTTCCAGCACCACGGCAACACCCG----CAGGTCTCTGACAAGTGACAAGAACACTTTATGCTGAATCCTCAGCAGG-ATCTGAGACCTATTAGGGATTTTGAATCCATCTGGAGCTCGAGGAATCTCTGAAATGA-------------GGCAAACCAGGGAAGGGCTCTGAGGAGACTTCCACACACTCCTCCAATCACACATGCAGCCCAAATTCCCCAAGTTTCCTGTTCTGGTTAATTAGAGATCCCAGTT--TCATGATCACTGACTGCCCTTT-------------------CTTCG-----GGGGCTGGTTTGGTTTAACGATTCCTGACATTTCATCCACGGCACTG--AGCTT--------TTTTACAGCAAT-------------------------------AGAAAATAACAGCCTCTCTCCCTGACAGCAGAGCAGGTTGTTCGATGCTGTAACTAGAGGAACAGTGATGGCTCTCCTCTGTGCTAACTCACGGCACAATAGGTGGGACATCAAGAATAATGACATCAA----------ATGGCCGTGGAAACGGATTCGC---------------AGGATG-------------CGCAGGTGAACGCCCATTTCAAGCTAGAC----ACTCTCTTGTGTCCTGTGCCGCTTCCAGCAGCAAAGAGTTCTCACCGCTTTCCGCTCCTCGTTTGAGTGTGGGAAGCTGCCAGGAAGGCTCCTTTTGAAAAGCTGTGATC-----TGAGGGTCCAACCA---AACCTGGGGCTTTGAGGACTCTCCCCAGGAGGCAGCCCCTTCAGTACCTGTGCGGAGGCAGTGATCAGAATAAGAGGAGTGCAGGAAATGCAAAGGCTACCTGGTGACAATCCAGTGTTTGGGGCCAGCAAGGACTTGTTGAGATCAGCGGTAAGAACTGTGGATAATGACACAAGCAGCTGCCCAAGGGAGCCTGAGGGAGAACAAGCATTAATGACCTCAGAGACTTGTTCTCTTTCTAGTCTTTTCCTGAAATGCCAAACCATGGAGCCAGTTATCAATCAAGGGAGTGAAATATATCGGAGGATGGGTTTGGTTTGCTACAGTGACAGCCAGCTTCGCTTTTGAATACTCTTTGAAAACAATTTTTACCGTGCAATGCTGGAAAAAGCCAACAAATAATAAACCTGTCGCAGTACTCACCAAGAGCTCATAAATACAAAAGTCA-------GCCTTGCAGCTGCAAAGAAACGCCATTCCTAAGCTTGAAAAATTGTCAGTACTCAATCATTGCATCTGATACCAATTTTCATTT chr4 + 94230402 64410666 64410665 64411986 64410666 64410665 64411986 1321 AAAAAAAGATTATAGGGAACAGA----TTTGTACAAGATACTTTACTCTTTAGAGGACAAGTAGAGGAGACATTTGTAGGTAATATAAAAGTAAATGCACAAAATGTATTGCTCCTGGCAGCACAGGTACACCTAACATCAGATTGCTGGCAAACGACATATAGAGTTTATCCTGAATCCTCAGTGGGGAGCTTAAATCTGT---GTTTTTTAAACCTGCCTGGAGTATTCAGTACCCCTGGTACAATTGAACGTACACAGGAAAAATATGAAAAAGT------AAGGTTTTTGC---CTCTTTCTCTCTTGCTTTTCTCCCTGAATGTTCCAGCTCCC------AATTAATTATGGACATAAGCTACTCATAACAGCAGatttttttttaattttatttttattaCTGTTTTGTCAATGAAAACAGTTTGGCTTAATTATTTCTGGCATTTCAGTCAGCATACTGTGGGCTTGCTCACAATTATACAGCATTTAATTAAATTAATCAAGAAGTAAGTAAGTCAAGAAATAAATAGTCTATCTCTCCAACATC-TAGCAGTTTATTCAG-------------------------------CTTCATGATAACACAGATCACATCAGATAAAACATCACAAATAACCAGTTCAACCAGTACATAAAGACCAAGCAGACAGAATCTCTACTTTATTTACCATAAGACATTTCTCACCCCAACTCATACAAACAA--ATTTTAAAGTACACTCATGCTTTCATGT-TCCTGTTCAGTAAGCAACAAAATAAA------------------------TTTGAAGGGAGGAA------AGGAGAAT---------GAGGCAGTGAGCCAAATTAATGGTCCAACTTTTTAACTGAAGGAGTGAGAGACGTTCCCCTGACCACCATCAGCCCAGGAGGATTGCTGAGTCCACTAT---GATGAAAGGTCTATGGTAAGTGAAAGGGACAG-TGGTGAATTTGTGGTCGTTTGAGCAGTCATGGGACTCTGGAAATCAGCAGCAAGAAATGTGGATAATGGCACAAGCAGTTGCCCAAGGGAGGCTCAGGGAAAA--AGGATTAATGACCATTGAGACTTGCTCTCCTTCTACTCCTTCCCTGAAATGCCGAACTGCTGAGCCAGTTATCAATCAAGAATGTGAAATACATTGGTGGATTGATTGGGTTTGATACAGTGGCAGCCAGCTACACTTTTGAATACTCTTTGAAAACAATTTTTACTGTGCATTGCTGGAGAAAGCCAACAAATAATAAACCTGTCAAAGTACTCACCGAGTGCTCGTAAATACAAAAGCTGCTGTAGTGCCTTGCAGTTGCCAGTGGGAACCATTCCAAAGCCTGAAAAATCATCAATATTTAATCGTTGTATCTGATATCAATTCTAATTT ..:x..::...x.:.....x.:.----....:x:.::.x.x:x..:..:x.........::.:..:::..:......:xx....x....x..---.x::.....xx.xx:x..:.::...x...:.xx.....::----...:.:x...:...::....x:x.x.x.....x............::..-.x..x.:.:..:.---.xx....:..:.:::......:x:xx:.x.:.:...:x.::.-------------..x...x:.x.:..::.:------:..::..:::.---...:.:.xx..x::.x.x:xx...x:.x.x::.x..:.:..------::.......x:..:x:x..:.--....:.:x:.x..:.x:::...-------------------:..:.-----.:::x::......:....:x...:...:.......x:..xx::....--:....--------..x.......x.-------------------------------.....xx..:..:..x....:.::...x.-x.....x..:...::-------------------------------..:::..x....x..x:x....x:..:.:::......x:.....:x.xx....----------.x.:..:x.x.:..:..x..x.---------------.:..::-------------.x..x:::...:x--....:..:x..x..----:..:..x...-......x.x.:xxx..:..:x.x.:.------------------------.....:x.x:....------....::::---------:.:..x....x.-----.:.x........:x---...:x::..xx.x:::...x:.....x.:xx:.x::.xx::...x.xxxx...x...x.x::x..---:..:.:...xx.:::.x..:..x..:..x:.x-......xxx.x::..xx..x.:..x:x..x..:x:.x.x..:......:.:.....x...........:.........:............x..x.....:..--..x..........x:x........:....:.....x..:..:...........:...:::x...................::x........:..:..x....x.:..x......x.......:.........x.:...............................:.....x.......:.........................:x..........:..x....:............:::-------.........:...x.:x:::x:.......x....:........::...:..:.:....:...:........:.....:.x.... 23M4D65M3I40M4I49M1I13M3D42M13I18M6D11M3D41M6D21M2I22M19I5M5I47M2I5M8I12M31I29M1D15M31D53M10I22M15I6M13I13M2D14M4I10M1D26M24D14M6D8M9D12M5I14M3I65M3D32M1D103M2D242M7I84M 787/1176 66.9% 1321/94230402 0.0% 247/1176 21.0% 124962016 65252539 +3332 chr4 + 190214555 189411260 189411259 189411329 70 CCCGGTTCTTTCAAGATTTCTTTTTGAAATTGCTTTTCTACTGTTTAAATATG-ATACCCCTAGAAGTAGG chr4 + 94230402 44070415 44070414 44070485 44070415 44070414 44070485 71 CCCAGATCTTTCAAAATCTCTTTCTGAAATTGTCTTTGTTGCATTTAAATATGCATTTTCCTCGAGATAGG ...:.x........:..:.....:........::...x.xx::..........-..x::...x..::.... 53M1I17M 52/70 74.3% 71/94230402 0.0% 1/70 1.4% 145340845 44873710 +3217 chr4 + 190214555 189427657 189427656 189427731 75 ATAATAATAATAAAAAAAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAGACAGAAAGAAAGA---AAGGAAGAAAGAA chr4 + 94230402 75241516 75241515 75241593 75241516 75241515 75241593 78 ATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA ...:x...x...:.x.:..........:.........:...:x.:..xx.x......x..:.---....:.x..x... 62M3I13M 56/75 74.7% 78/94230402 0.0% 3/75 4.0% 114186141 76028414 +3008 chr4 + 190214555 189427686 189427685 189427760 75 AGAAAGAAGAAAGAAAGAAGACAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAGAAAGAAAGAAAGA chr4 + 94230402 7259336 7259335 7259410 7259336 7259335 7259410 75 AGAAAAAGGAAAGAAAAAAGACTTAGGTAAAGGTGGGAGCAACGAGTTCAGCAGAGAAAGAGATTGAAATAAAGA .....:.:........:.....xx.::x....:x:...:x..x..:xxx..x.:.........xx....x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 182168350 8046205 +3020 chr4 + 190214555 189427695 189427694 189427758 64 AAAGAAAGAAGACAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAGAAAGAAAGAAA chr4 + 94230402 29014674 29014673 29014737 29014674 29014673 29014737 64 AAGTGAAGGAGCCATAAAGGAAGAGGGGAGAGGAGAAAAAAAAAAAGAGAAAGAAAAAATGGAA ..:x:...:..x..x....:....::...::::.....:..::.....:.:.....:..x.:.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 160413021 29801534 +8032 chr4 + 190214555 189431851 189431850 189432095 245 AATGTAATTTCTCTTTTGAGCATTTCCGTGTACACTTTGACTGTGGCCTTCATCCCTCGTCAGGTTTGCAACTGCAATTTTCACTAATCCCCGTGAGCACTTTCCCTCACAAGGAACAGAGAGCCCAGGCTGTTAACCTA--GTCGAGGAGACTGGACCACATGTTAGAT--------ATCACAGGCCTTTGATTCCAAGCAATACTTTTCAGTTGACAGTTCACTGAGAATTTAATACATATTTAACAAAGATC chr4 + 94230402 64431768 64431767 64432011 64431768 64431767 64432011 244 AACACAATTTCTCTTTCAGCCAT--CCACATACATTTTTGCTGTGGCCTTCATTCTTGGCCAGTT-----ATTGATTCTCTTACAAATCCTTATGATTGCCTTCAATGACAAAGATTAGATAGC----GCCATTAACCCACAGCCAAGGGCACTGTATCACTTATTAGATTTCTTTTAATCAGACACCTTTGATCCCAAGCAGTACTTAACAACTGATATGCCACTGAGAGTGTAATGCATGTAAAGAAAAGATC ..:::...........:::x...--..:::....:...x:.............:.:.x.:...x.-----.:..xxx:.:.:..x.....:::...x::.:...xx.x....:..x:...x...----..::......:.--.:.:...:x....x.:...x.:......--------....x.x:........:.......:.....xx..::...:.xx:........:.x....:...:.xx.:x....... 23M2D40M5D54M4D12M2I28M8I77M 162/234 69.2% 244/94230402 0.0% 21/234 9.0% 125000083 65214472 +3318 chr4 + 190214555 189456564 189456563 189456630 67 TGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAGGCGGAGGTTGCAG chr4 + 94230402 76033211 76033210 76033277 76033211 76033210 76033277 67 TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ....:.:...........::........x.xx.x...x..:........:.:..x:xx:..:..:.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 113423353 76791202 +3520 chr4 + 190214555 189460609 189460608 189460707 99 AGAAGAAAATAG-----AAGGAAAGAAGGAGGGAAAGAAGAAAAAAGGAAGGAAGGAAGGAAAGAAGAAAAAAAGGAAGGAAGGAATGGGAAGAAGGGAAGGAA chr4 + 94230402 58935727 58935726 58935825 58935727 58935726 58935825 99 AGAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAA-----TAAGAAAGTAAAGGAAGAAGAAATAATGCAAGGGAAAAAGAGGAAATTGTGCAGGAA .........:..-----.......:.x.:..:.:...:.:..-----x...:...x..:.:.........x..x.x....:.::..x:....:xx.x.x..... 12M5I25M5D57M 68/94 72.3% 99/94230402 0.0% 10/94 10.6% 130524882 59689673 +7582 chr4 + 190214555 189494125 189494124 189494355 231 CAACTTGTTACCAATCTATATTTTTATCTTTGTTTGGTTCTGCTTTTAAATTGTTTCAGCAATGCTAATTATAAGAAAAA-------GATAAGGTCTGCTTGCTGTTCTTC----CTCACAGCAGCTCGGAAAATGAACTGCAGCATTCTACTTTCCTATTTGTGCAGGTAATGATGTATTCATTGTGGCAAAGTCTTCACAGATAACAAAAACTACATGCTCTTTGCAGATGTGCTAATTA chr4 + 94230402 64446582 64446581 64446814 64446582 64446581 64446814 233 CAACACATTGTCCATCCTTATTTTT-----TATCTGCTTCCAACTGTTAG--GCTTCTACTATGCCTATAAGAAAAAAAAAAAAAAAGATAAATTC--CATGCTTTTCTTCAGTGTGCAGGGCATCTCAGAAAATGGACTGTAGCAATACAGATTATTAGATGTGCAGGTAATGATGTATTCCCTCCATCAAACTCTTCATAGATAATAAAAATTACATGCTTGTTGCAGACACACTAATTA ....x::..::.x...:x.......-----.:.:..x...::x:.x.x.:--.:...x:.x....:x..x.x..:.....-------.....:x..--.x....x......----:x..x:...x...:.......:....:....x.x:.xx..x:..xx.....................x:.x::x....x......:......:.....:........:x.......::::....... 25M5D20M2D28M7I9M2D13M4I127M 158/222 71.2% 233/94230402 0.0% 20/222 9.0% 125047543 65167012 +28607 chr4 + 190214555 189502680 189502679 189503464 785 TTCAGCTGCCAAATCTGCTCAGCTTT---CTGTGTCTAAAACGCTTACCAGATATGACTCCATTGTGATTAGATGCC--TCCATTCCAGTGGACTTTATTAAATTAGAATACAAGATAGCTGTCACTCTCTGAAGGATACAAGTAAGAGCAAG---TCTTGAACGAGC-CTCTTTAAACCATCACGATATAAATAGGCCA---TATTTCCAGGGTGACAGAGCAAGTAAAGGATTTCAAAGATGAGTAGGGAAAGCCCAAGTTAGCTAATAAATGACGTTCATTCATTAGGAAATGGTATCTGCAAACTATTCAAAAATCCCCTTCACTAAA-TAAGTCATGGACTGCGTTTCTGTTCGCAAGCCAGCCTAACACAAGGTGATGACGTCCTCACACAAAACTTGCCCCAAATCCCCGTGGTTTACCACATGTCTTTAGATGACTGAGAATGAGAAAGGCAGAGAGAGTTAATTCCTGATTTACATATTCTGCTAATAAAGTGGCAAGGTCTTATGGAACAAACACGGCAGATGTAA-TTATGTAATTACGTATCTGTATGCAAATGTGCCGACGGCTCATAAATGCTGGAACGCTATTTGCAATGCTAATTAAGTGGCTTTTATTGAGGCTGCATAATTCCTACGTGTGATTTGGTTCCAGATGTCATTATAGCTTGTGAAACCTTTATTGTCAGGTTAGCTGAGGTGGCACACATTAACACCACTCATAAAACCTCTATTTATAATTAAATTATTTGCAATGACTCAGTGATTT-TCA-TCATCCCCTGGCCACCTCTGT chr4 + 94230402 64450684 64450683 64451450 64450684 64450683 64451450 767 TTTAGGCATCAGAGGCGCTCAGGTTCATGCTGAATTTAATAAGCTACCTAAATAGCACTGTTGTTTGGTCAGATATCCTTCCATTCCAGACTTCTCTATT----TATAACACAAAATAACTATTGCTATCAGAAAAGTACTAATGAGaaaaaaatatattaatttaattCTCTTTAAAACTGGAAGA---AAATAAATCAAGAGATTTGCAGTATGACCCCACAAACTAAG-ATTTCAGAGATGAATGGAGA------------GTAAGAAAATGATAATAA--------------GTGTTTACAAACCTCTTAAAAGACTGCTAGAGAAAAGTAAGCCCAGGGATACAGTCTAGTTTCCATGCCATTCTAAGGCAAGATTAGAAAGTCCAGATAAAAGAGCTGTAGCAAGTTTCCATAATTTGCCACATATTTACAGACTACTAAAAAAGTAGATGATAAAAGGAATTAATTCCTGATTTACATATTCTGCTAATAAAGTGGCAAGGTCTTAAGGAACAAACACAACAGCTGCAAATTAAGTAATTACGTATCTGTATGCAAATTTGCAGACATCTCATAAATGTTGGAATACTATTTGCAATGCTAATTGAGTGCCTTTTATTGCCTCTGCATAATTCCTACATATGATTTTTTGCCAGATGTCATTGTAGCTTGAAAAACCTTTATTGTCAGGTTAGCTGAGGTAGCACACATTAACACTGCTCATAAAAATCCTATTTTTAATTAAATTACCTGCACTGCCTCAATAATTTCTCACTGATCTCCTGTCCAAATCAGT ..:..x:::..:.xx:......x..:---...x:.:...x.x...xx.:.:...xx...x:xx.x..:.:....::.--..........xxxx..:....----..x..:....:...:..:.::..x..x...:::...x.:.:...:x..:---.x..:.x:x.::-.........x.xxx.x..---.....:::..---x....x...x:....xxx:...::x...-......:......:.:.:..------------.:x.:x......::x.x.--------------..:.:.:.....:x:.:....:x.:x..xx.xx...-....:.xx..:x.:.:x.::x...:x..x....x:....x:....:.x.x:.x....xx.:.x..:.x:..:xx...:.::..:.::...:......:.:.x:...:x...:.:..x.x::.x.::.:.::..:..............................................x...........::...x..:..-...x........................x...x...:x..........:.....::..................:....x.........xxx...............:.:......xx.x............:.......x:............................:..............::.........x::......x...........::....x..x....:.:....-...-.x...:....x...xx..x.. 26M3I48M2I21M4D49M3I12M1I18M3D10M3I28M1D20M12D18M14D36M1I203M1I238M1I3M1I21M 540/751 71.9% 767/94230402 0.0% 50/751 6.7% 125051996 65162559 +3385 chr4 + 190214555 189519810 189519809 189519883 74 CATATGTGTGTGTGTGTGTATATGTATAT--ATGTGTATATACGTATGTGTATATATGTGTGTGTATATATGTATA chr4 + 94230402 85834537 85834536 85834612 85834537 85834536 85834612 76 CATTTGTGTCTGTGTGTGTGTGTGTGTATTAATGTAGGCATACATATGTAAATACATGTTTATGCACACATACACA ...x.....x.........:.:...:...--....:x::....:.....:x...:....x.:..:.:.:..::.:. 29M2I45M 53/74 71.6% 76/94230402 0.0% 2/74 2.7% 103685273 86529282 +3038 chr4 + 190214555 189534050 189534049 189534107 58 TTTCTTGTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTT chr4 + 94230402 81934674 81934673 81934731 81934674 81934673 81934731 58 TTCACTGTTTTTTTTGTTGTTGTTGTTGTTGGGTTTTTTTTGTGGATTTTTTTTTTTT ..:x:......................x..x.x......x.x.x.x...x....x... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 107599376 82615179 +3093 chr4 + 190214555 189534056 189534055 189534101 46 GTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGTTTTGTT chr4 + 94230402 90203141 90203140 90203186 90203141 90203140 90203186 46 GTTTTTTTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTGTATT .....................x....x......x....x..x.:.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 99330915 90883640 +3259 chr4 + 190214555 189563975 189563974 189564027 53 CATGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522772 23522771 23522824 23522772 23522771 23522824 53 CGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT .:.......:.................x::....::.x.....:.x....:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 166041203 24173352 +3433 chr4 + 190214555 189563976 189563975 189564029 54 ATGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522771 23522770 23522824 23522771 23522770 23522824 54 ACGTGTGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT .:......:.:..................::....::.x.....:.x....:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 166041205 24173350 +3047 chr4 + 190214555 189563977 189563976 189564025 49 TGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 + 94230402 23522776 23522775 23522824 23522776 23522775 23522824 49 TGTGTGTATATATATATATATATTCCTTTTCCTGTTTTTCTGTTTTCTT .......................x:x....::.x.....:.x....:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 166041201 24173354 +15149 chr4 + 190214555 189580213 189580212 189580600 388 TATTTGTCCAGAGACATTTACTAAAACTAGGTCCACTACAATGCCCCAGCCC-TTCTTTCCCCATAATAAAGGCATGACACCACAGGGTGCTAGCCAGGACAATATACTTGAGA-ATCTAGAGCC------------------AAGGTGGACAGGCTGGTAATGGAAGTCTGCCTTGTC--ACTGCGGTTATTTCTCTCCAGGGGTGATTTACAAGGTGATAAAAGACCTCAAGATGCCAAAGGTACTT-AGGCTGTTAAAAACCAGACTTTTATGATCCCTTGTTCCTTATAGTACATGTTTTTTCATTAATCAAATGCTTATTCTATTAGAAGTCCCAAACCTTTAAGATGGTGGGACATTTCATTTTTATTGTCCTGAAGTGGCATTAAAATCCACATGGTCCTCAGC chr4 + 94230402 64481739 64481738 64482147 64481739 64481738 64482147 409 TGTTTGCATCAAGAAGATTATTAAAAGCAAAGCCACTGCAATAACGCAGAACGCTCCCTTGGCATAATGAAAGCAAGATGTAAAAATGTGTTGGTGAGAAGGGCAGCTTTGAGGCAGCTGCAGTCCAAGCTCTATAATATCTGAAGGAGGATATGCTGGTAATGGAAGTGTGCCTTGTCTAACTCTGCCTATTCATCTCAAGGGGCGATTTACAAGGTGATAAAAGGTTCCAAGCTGCAAAAGGTACTTTAGGCAGTTAAAAAGCAGCTTTTTATGATCATTTCTTCTGTACAGTACACGTTGTTTCATTAATCAAATGTTTATTCTATTA-AAACACCAACTCTTTTAGCTGGTGGGACA-ACAAGTTTTACTACCATGAAATGGCATTAAAAGCCACAGACTTCCCAGC .:....:x:x:...x:x...:.....x:.::x.....:....:x.x...xx.-:..::.:xx......:..:...x..:::x.x.:x...:.:.:x..:.x:::.xx:.....:-.x..:x..:.------------------....x...:.x...............x.........--...x:.x:....:x....x.....:....................::::....x...x..........-....x........x...x:..........x:..x...:x..:......:...x................:...........-..::x....x:....x..x..........-x:x.x.....:.::.x....:...........x.....x:x.:.:.... 52M1I61M1I10M18I36M2I68M1I81M1D29M1D49M 279/386 72.3% 409/94230402 0.0% 25/386 6.5% 125098474 65116081 +14576 chr4 + 190214555 189609605 189609604 189610010 406 TTTACAAATAACTGGCAATTTGGGAAACTTTTCAATGCATAACTTTATAAAAAACAAAT----------------------------AAAGACTCATAATAAATTAATATGTTGAATTAGGTCTAAAGTAGATGGGATTACATTAAAATCTCACTTCATTTTATTAAAAA-TTCAATAAAACAGTGCCAATTAAATGAGGCAATTGGTAAGAACAAGGAGATTA-CTTGATGTTCCATACATTCTCCCTCATTATGAAGTTTCACTTTTAACAGCTTGTTGACAGTGAGTCTCTCCTGACAGTAGCAGGGCTAGAACCTTGAGTCAGCTTTGCAATCGACTTGTAGAAA-AACCCTCAGATTGCCAGTTAGCACATCTGCCTCTCTAGGTAATTGAATTCTTATTGAAAATACATCATTGGCGATGTATTAGAAATA chr4 + 94230402 64491793 64491792 64492227 64491793 64491792 64492227 435 TTTACACATAGCTGGAAGGTTCTGGGACTCTGACTAAAATAACTTTGTGCAAAAGAAATTAATCAGTTGTTTAAGTTCTTCTAATCAAGAAAGTCATAATAAATTAATATATGTAATTAGAAGCAATCTCAACAAGATTACATTAAAACCTCATTTTGTTCTATTAAAAAATTCAATAAAAC--TGCCAATTAAATTAGGCAATCAGTAAGAACAAGGGGATTTTCTTGATGTTTCGTCTACTTTGCTCAGTGATTAGCAATCATTTTTAACAGCTTGTTGACAACGCTCATCTCTTGACAGTGCCGCAGGTTGTATCAGATGCCAGCTTTCAAATCTGCTTGGACAAATCATCCTTGTACTGCCATTTAGCACATCTGCCTCTGCAGGTAATTGAGTTCTCTCAGGAAACCCAGTATTTCAGAAGCATGGGAGATA ......x...:....x.:x..xx.::...:.xxxxx:x........:.:x....x....----------------------------.:.:.x.................:.xx......:xx:..xx.x:.:::.............:....:..::..:.........-...........--............x.......::............:....x-.........:.:.x:.:.:.x.::x:.x..x.:xxx...:...................::.xx:x....:.......:x.:x:.x.x.x.:.xx:x.:.......xx....x:....x.x...-x.:...::x.:.....x.................x:..........:....:x:x.:...:x..x:...xxx..x.:..x:..:... 59M28I83M1I11M2D40M1I124M1I87M 284/404 70.3% 435/94230402 0.0% 33/404 8.2% 125117812 65096743 +15642 chr4 + 190214555 189618821 189618820 189619317 497 GACAAATGTTAACTTTATGTACCCTGCCACTCTACAAATCAAA-GAAATGAATTCATAAGACATAGTTTTGATGGTG-----------GGGGCATTTCTGATAGAATTTGAGATTAT----TAAGGAATCTCAGGGGCATTAAGTTTGAAAGTAATATCATTAGATCCATCCAAATAAATGGGGCTGATATTGGGAGA---ATGCATGTATGTACGCAGCTTGTCTTTCCCCCACAGTCCCTAAAATTGGAAACACACCACCAAGAGGAAGTAATAACACTGCAGTCCAATATTCAAAGTCAGATTTTTACTCGTATTGATGATTTTTAACATTTTGGAATATCA-CTTTATGCCTCCACCTGAAAGTTGTTATAATACCAGAATTCCAGGGC-TGTGTTCACTGCAGTGTTTTATAAAAGTAATATTTTTCTTAGTTATTTTAAGGGGGTGTAAAATGAAAAAAAATTATGGCAGGGATAGTTTATTAGTCTCCTTCCAAATCAACAATCCATATTT chr4 + 94230402 64500014 64500013 64500517 64500014 64500013 64500517 504 GGTGAAAGTTAATCCTAGTTGCCATGTCACTCTACAAATCAAAAGAAAGCAATCCATTACAGTTAGTTTGGAGGGCAACAGTATTACAGTGGTATTCCTGATGGATTTAGAAATTATAGTCTGTGGAACTTCACAGGCATTAGGCATGAAAATAAAACCATTAGATCT-TCTCAACAAATGGAGTCACTATTGAAGGATATATTTTTTCCTGCTCACAGTCAGGTTTTT------ATTTTTCCAAATTGGAAACACACCACACAGAGGAAGTAATAACATTGCAGTAAAGTATTCAAAGCCCAATTTTTATTCACATTGATTATCTTTTACATTTTGAAGTACTGCCTTTGTACAGTCATCTGTAAGTGGTTATCAGTTAGGAATTCAAAACCTTTTGTTCATTAAACCATTTTGTGAAAACACTATTTTTGTTA--TATCTTCAG-----GCACAGTGGAAAAGAAATATGATGCAAATGGATTTTCATTCACCTTCCAAGTTTAAAATCTGCATTT .:::..x.....:::..xx.:..x..:................-....xx...:...x.x.xx......x..x..::-----------.x..:...:.....:..x..x..:.....----.:x....::...x:.......:.:x.....:...x.:.........:-..:x..:......:.:::x.....:::..---..x:x.x:x..:x.:...::x.x:...:------.x.::::x..................xx................:......xx.:.........:.x:.......:..::......x..:...x........:.:..:::-....:.:.xx:..:...x....x.....x.xx:x:......x.::x.-.x......:.:x.x::....:.:...::.x.......x...--...:..x..-----.:.x.:..:....:..x....:::x::..:.x..x.:.x..x........:.:x.x....:::.... 43M1I33M11I29M4I47M1D29M3I28M6D110M1I47M1I41M2D9M5D67M 330/483 68.3% 504/94230402 0.0% 35/483 7.2% 125118807 65095748 +3141 chr4 + 190214555 189629761 189629760 189629800 40 TCCATCTGAAAAAAAAAGAAAAGAGAAAGAAAGAAAGAAA chr4 + 94230402 54750794 54750793 54750833 54750794 54750793 54750833 40 TCCATATGAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAA .....x...........:........:...:......... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 134878967 55335588 +3291 chr4 + 190214555 189629808 189629807 189629887 80 AGAAAGAGAAAGAAAAAGAGAGAGAGAAAGAAAGACAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAC--GAAAGAAAGAAA chr4 + 94230402 46677676 46677675 46677757 46677676 46677675 46677757 82 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGCAACACTGTGGAAGAAAACTAGAGATAGAAATGTGCATCAGAAAGAAAGTAA .:...:.:...:...............:..x..x..x:x.:......:xx.....x.....x:x:x.:--.........x.. 68M2I12M 58/80 72.5% 82/94230402 0.0% 2/80 2.5% 142952132 47262423 +3016 chr4 + 190214555 189637377 189637376 189637435 59 AGGAAGGAATCAAGGAAGAAGGAAGGAAAGAAGGGAAAGAGAAAGAAAGAGAAAAAAGA chr4 + 94230402 21369212 21369211 21369270 21369212 21369211 21369270 59 AGGAAGGAGGCAAAGAAAAAGGAACAAAATTAGGGAAAAAAATAGGAAGCAAGAAGAGA ........:x...:...:......x:...xx.......:.:.x..:...x:.:..:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 168268165 21946390 +18067 chr4 + 190214555 189648497 189648496 189649056 560 AAAAATAAGACCAGGGAAGAAGCTGCTAATTAGCCAGAGGTG---CAATGATGTATCATGACTGTCAAAGCAAAGGAGCGAAG-TCGGAACTATTTTTGCTGTAGAGATAGCCAGCCTTCAGGAAGGGCCATGTTT-------CCCAGTAATTTAATCTGAAAGACATAAATCATGAC--GAAAATCTCCCTGCATTAGTAATGGAGAGAAATACCTGCATTCTAGCAAGGTTTGCATGATAAAAGACAGGTTTTCATACATCTGAGATCA-GGAAAAATAATTATCAATCAAAGATAACCCCCTGCATCCTCGTTTGAAGTGAAATTGGAGGTCAGCGGAGGCCAAGTAAAAGAGAGGACTGGATTGTCTCTGCAATTTTAAGGAGCTC-ATTACTAGAAATGCTGTTTTACAAAGTTTCAGCTGTATGTGATTTTGAAACATTAATGATTTAATGCCTGCCAGACAAAGAAAGGGAAGGGATGTCAAAAACCAAAAACAGGTATAACTGTATCATTGGCATGAAAATGGAGGCTGACATCATAATGATGAGAAATCACCCCAGGGCCAAAGTA chr4 + 94230402 64516828 64516827 64517391 64516828 64516827 64517391 564 AAAAATCAAACTCAGGCAATCACTGCTAATTAAGAAGAGGTGATGCACTGATGGATTGGGTGAGTCAAAAAATGAGAAAGAAGGTTAGATAAAGTTTTGCAGCCAGAATATTCAACGTTCTGGAAAGGCAATGAATAAAGAATTCCAATAATTCAATCTGAAATATAAAAATCAGGAATGAAAAGTGCCTCTGTCTCAATAATAGAAAGAAATACCTACAATGTAGTTATATTTCTATGATAAAAGGCAGTTTCTTATACATGCAAAACCATGGAGAAACAATCCTCAATCAAAGATAACTGC-----TCAATACCTGAAATAGAACTGAAGATCATCAGAGGTTAG---AAAAACAAGACTGATGTTTCTCAGCAAATTTAAGAAACAAGACAACTAGGAGCTCCATTTTGCCAGTGTAGAGAGGCATTTGATTTTGAAATATTAATGATTTAATGCCTGCCAGAAAAGGACCTAGA---GATATCACATCTCAAAGACAATTGTAACTGCATTATCATCATAAAAATGAAAGTTGACATTATGATGATGAAAAATGTTTCCTGAGGCATAATA ......x.:..:x:..x.:xx:..........:xx.......---..x.....x..::x.xxx......:x.x::..:x....-.::..xxx.x......x.:x:::...x:..:.x...x....:...x...xx.-------:...:.....:.........x.:.x......x..x--:...:.x:.:...:x.:.:....:..:..........:..x.x...:x.x:...x:..........:...x..:.:......x::.:.:..-...:...:...:x...............:x.-----..xx::::....:.::..:..:..:...x.:....::.:---...:.x.:.....:xx.x....x....x......:.:.xx-.:x.....:.::x.::....:.x.:xx.xx..xx.:..x...........:........................x..:..xxx:..---...:...x.xx:....:...:x.:......:..:..::x...:......:.:.:......:..:.......:....xx::..x.:.x..x.:.. 42M3I38M1I52M7I35M2I91M1I31M5D39M3D40M1I87M3D94M 371/549 67.6% 564/94230402 0.0% 26/549 4.7% 125131669 65082886 +3027 chr4 + 190214555 189653600 189653599 189653647 48 AAGACAAGGTAAATGAAATGCAAAAAAAAAAAAAAAAAAAAGAAAAGA chr4 + 94230402 52702901 52702900 52702948 52702901 52702900 52702948 48 AAAACAGGGAAAATAAAATGCCAAAGGAAAAAAAAAAAAGAAAAAGGA ..:...:..x....:......x...::............:.:...:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 136950699 53263856 +3473 chr4 + 190214555 189673749 189673748 189673848 100 GTGGTGGCGGACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGTGCCAAGATGGTGCCA chr4 + 94230402 76033201 76033200 76033289 76033201 76033200 76033289 89 GTGGTG-----CACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG------AACATGATGCCA ......-----...x......:.........:.::........x.xx.x...x::........::.:..x:xx:..:..:..------..x...:..... 6M5D71M6D12M 65/89 73.0% 89/94230402 0.0% 11/89 12.4% 113640548 76574007 +3182 chr4 + 190214555 189745418 189745417 189745487 70 CATAGTGGCATGCACCTGTAGTCCCAGCTACTAGGGAAGGTGAGGCAGAAGAATCACTTGAACCTGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGG--TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ..:.....--.....x......:.........x.::.:.x....x.xx:x...x..........::.:.. 8M2D60M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 113712221 76502334 +47729 chr4 + 190214555 189779497 189779496 189780209 713 CCTCTAATTCTATAAAATCCAGTTGTACAGCCAGAGGAAAACTCAGAACAGGCACACAAATTTTTGTACTTTGGTTACTGAAAGGGATTTTGTCTTGTTAATCTTGAAGGATTGGCAGAGCAATTTTATCACATTTTCTGAAAAAAATCTATACAGATTTAAGGTCGCATTCTGGATTTAATTGAAGTAACCTTTTGTACAATCTAGCTTTAATGAAGTGCAATGAAGTTAAACTCCGTGGGGGCCATTAATCTGAAACACTCCATTTAAG-AACTACAAGGGGAGTTTTTAATAAACAGTGTGAACTAATGCCCATGTGGAAAGGTAATTGAGAGGGAGCTGGTGTCTGGGCCAGATTGTTATTAAACCCTTATCACAGGTAAAGCTGAAACCCCAA-TGGCAAGCTGCTCTGTGATTTATCGTGCCCTTCTCATCCTAACTTTAAAGAAAAGGCTACGTTTAATAATGAAAAAATCCTGTGACTAAGCTATAAAATAACTGAGCAATTACTTAGAATAATTTATACAGTGCAATACATTGACCTTGCTTTAAGCATAAAATCTACAAAATAACTTTGGCCATAAAACTGTGAACTACTAAAAGTACTAAAGGTTTTAACCATTTTTATTGGGTGGTGCCTGGGGGGACCATAAATACGTGTTACA-CTCTAATCACAGGGCTTAAGAAAATTCATAATTTTTTATCTTAAAATG chr4 + 94230402 64556495 64556494 64557204 64556495 64556494 64557204 710 CTTCTAATCCTG--AAATTTGAATATTAATCTCCGAGCAAATTCAAAGCAGAAATAACATATTTTGAAATTCAGTCTCCAAGAAG-ATGTTGCCCTGCTAATCTCAAAGGATTGGCATAGCAATTTTACCACATTTTCT--AAAAAATCCATACAGATTTAAGGTCGAGTTCTGGATTTAATTGAAGTAACCTTTTGTACAATCTAGCTTTAATGAAGTGCAATGAAGTTAAACTCCATAGGGGCCATTAATCTGAAACACTCCATTAAAACAACTACAAGGGGAGTTTTTAATAAACAGTGTGAACTAATGCCCATGTGGAAAGGTAATTGAGAGGGAACTGGTGTCTGGGCCAGATTGTTATTAAATCCTTATCACAGGTAAAGCTGAAACCCCAAATGGCAAGCTGCCATGTGATTTATGGTGCCCTTCTCTTCCCAGCCTTAAAGAAAAGGCTATGTTTAATAATAAAAAAATCCTGTGACTAAGCTATAAAATAACCCAGCAATTACTTAGAATAATTTATACAGTGCAATACACTGACCTTGCTCTAAGCATAAAGTCTACAAAATAACTTCTGCAATAAAACTGTGAACTACTAAAAGGACTAAGGG-TTTAACCATTTTTATTGTGCAGAACCTGAGGGTAATATAAATACATGCTACATTTCTAATAGAAGAGTTTACAAAAATTCAAAACTTTTTAATCTCAAACG .:......:..:--....::::x.:.xx.x.:xx::.x...:...:.:...:x.:.xx.xx.....x.x..::..:x.::.:.:.-..x...:.:..:......::...........x..........:..........--........:.................x:....................................................................:.:...........................x..:-...................................................................:............................:.............................-...........:x..........x...........x...:.:.:...............:..........:...............................:x....................................:..........:..........:...............:x..x.......................x.....:..-.................x.::.x:....:...x.x:........:..:....-:......x:x..:.:...x:........x..:......x::.x...:. 12M2D71M1D53M2D130M1I126M1I215M1D52M1I48M 607/707 85.9% 710/94230402 0.0% 9/707 1.3% 125223002 64991553 +8521 chr4 + 190214555 189792612 189792611 189793211 600 TTTTCTTTCTGCCTTTCGAGAACTAATTTCTCTTAAAAGAAAGAAAATTATCCGTGGTTTCCACTTAAGCCAAACGGCCAGACAGCTCCCAGGAAAAATCTAGAGAGAGGAGGATGATTGGAGAGGCGGAAAGAGAGGACATATACCTCCTTCCTTCTTATCAAGTCCCAATACTCTGCTGCTCAAGGGAATATGGAATCTCAGAAGTACTTGA-------TATGAAAATGACAAAATTCATTTATTGACAGTTGGGTAAAATTGTATCCTAACACAATCACAGAG----AGTGCTGTCGTTACTTGAACAAAATAAAGCAACACAAAAACATTTGGCCAATGAGGTTCACAGGACGCAAGAGACTACAAGCTG------GTGAGTGACAGGCATACGTTCAAGCCTTGCACTGTCACGGTATGGGGTCAGATCTTCAGAGAAGTTTTGACAAAGGATTTCACTGCCCTCACAATACATTTTATGC---CTCTCCTAAGAAACGCTTAATGTCTGCAATTATGTGTCAGCCACCCAAGAGCCTCAGAACGCTATGCAACCGCAGCATGCAAAAGC--------------AAACGTGTCAGAAAGGAAAACTGGGACGCTACTGCCCTCTGCTGG chr4 + 94230402 64560588 64560587 64561150 64560588 64560587 64561150 563 TTTAATTTTTAACATACAAAATTCACTGCCCCTTAACACAAGGAAAATAACCTA-AGTTTCCATTTAAGCCTAGTGGTCAAGAAGCTCCCATGACAGAT------------GAATAAAT-------------------ATATATATCTAAACCATTTTTAT---ATCCCATTGGTCCATTTCTGCAGAGAGTGTGGCCTCCCTGCAATGGTTAAGACAAAATATGAAAATAATAT--TTCATTTTCTAGCAATCTTCAAAATTGTTCTTTTAACCCACTTGCAGAATTCAAAAGTTGTT-TTGTTCTAGGGGGATGTCCCAGCTGAAGCAAGCCTGGCTCATGCAATTCAT-------------TTTCAAGCTGCTTTACATGAGTGATGG--ATGTCTTCTACTTTCTCACTGTCGTGTGAAGGAGTTAGATCT-CAGATAAATCCCAACAAAGAATTTCATTGACCTCACAGTATATTTTATGCAGTATAGTTCCAGAAATGTGTGATGTCTGTAAATACATGCTGGCCA-----------------GTAATGCATTTTCAGAGTAAAAAAGCAATGAAAACAGTGAAAAGGTAGGAGAAAAGAAAGCTTTATCTTTACTGCCCTCTTCAGG ...xx...:.:x.x.x.:.:.x::.x.x:.:.....x.x..:......x.:.::-:.......:.......x.::..:..::x........x..x.:..------------.:..:.x.-------------------.:.....:..xxx:.x..:....---:.....x.:x..:::.x..xx..:..:.:...xx..:.x.x.:.:x..:.-------.........:.:.x--.......x:.::..:.:xxxx...x.xx.x.::....x..x.::....:----.:x.:...:-..::.:x.:x:::..:xxx..:.xx..:x.x:::....:x...x::....:-------------:.x.......------:.......::.--..::x...x.x::.:x.......::.xx.x..:..:......-....x..:.::::......:......:..x.......:..:.........---x.xx:::x.....:.:x.:.......:..x..::..:::....-----------------.:x.....x::x...x:.:x......--------------...x..:xx.....:....:..xx:x.x:...........x.x.. 54M1D44M12D8M19D23M3D50M7I14M2D49M4I9M1D51M13D10M6I11M2D42M1D50M3I43M17D26M14I45M 331/529 62.6% 563/94230402 0.0% 105/529 19.8% 125232024 64982531 +3071 chr4 + 190214555 189794550 189794549 189794621 72 GCCCCTCTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTAAAACCCGGGAGGCGGAGGCTGCAG chr4 + 94230402 76033206 76033205 76033277 76033206 76033205 76033277 72 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..x.x.x..:.:...........::........x.xx.x...x....x:.....:.:..x:xx:.....:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 113761344 76453211 +3519 chr4 + 190214555 189806231 189806230 189806300 70 CGTGGTGGTGCATGCCTGTAATCCCAGCAACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .:::........:.--....:.:.....x.....::........x.xx.x...x.:...........:.. 14M2D54M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 113773034 76441521 +3093 chr4 + 190214555 189807998 189807997 189808083 86 CTCACAATACCATACAGGAGTAAGTACCAACACACACACACACACACACACACACACACACACACATACATACACACACACACAGA chr4 + 94230402 74526043 74526042 74526128 74526043 74526042 74526128 86 CTGAAAATATTGTAGATTGAAAAACACCAAGATCCACACACACACACATGAACATACACAAATATATACGTATATATGTATTTAGA ..x.x....:::..x.xx::x..::.....x.:x..............::x...:.....x.:.:....:..:.:.:::.:x:... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 115281955 74932600 +3573 chr4 + 190214555 189819013 189819012 189819085 73 GGCTTTTTC--TTTGTGTACACACACACATACACACAGATACACACACACACACACACACACACACACACACACA chr4 + 94230402 54963180 54963179 54963254 54963180 54963179 54963254 75 GGCTTTTTTAGTTTGTATATTCATACAGATGCACACCTATATACACACACACAGCCACGTGCGCCCATACACACA ........:--.....:..:x..:...x..:.....xx...:...........xx...:::.:.x..:....... 9M2I64M 55/73 75.3% 75/94230402 0.0% 2/73 2.7% 134855833 55358722 +24086 chr4 + 190214555 189826445 189826444 189826990 546 TATATCCAGTAACAAATCACATGTATGTTATAAGACATCCAGACTGATG-----TGGGCTCAGAAGGCACCTGCATAAAGTTTTTCAAAAGAACAGTCATAAGTTTTACTAGATGTGACAAACCTTATAAAAGTTAAATAATGTCACGCTTTATAAGCATTTCATTTAATACAACTGAACACATGGAGGGCATTGAGGATAATATTTAATTTTTTCCATATGTGGATTTAATACCACATAGAAGTTCTAGTCCCAGATTGCTAATTTTCCACCATGTGGTAGCCATTTAGTTG---------TATTTTTTAAAATACTTACCAAATTACAGAGTCGAGTTTCAGAG-GCAGCAGCTATGAGGAGGTTTAGGGTGCATG-GTATCCCTTTGGCTTAGCCCTGGGTCTCATGAGGAGGCAGTAAATCGTGACAGTATTTTCATGGCAGCACTGACT-GCTTTTCATAAGAATGAAGGTG--AGTTTGCAAAGCCACATGCTAATGCACTTCTAAAAAT----------------AGATTTGATGAATGGGACTCCTTCAAATTCTGACCAGTTTTAGCCACCT chr4 + 94230402 64573036 64573035 64573611 64573036 64573035 64573611 576 TGCATCCAGTAACTAACTGCACGGAGTGTGTGTGATGTCCTGACTTGAGCAAACTCAGCTCAAGAGGCACCTGCACAAAGCTTTCCAATGCAACTGCAATAAATGTTACTGAATGTGGCAAATCTTATAAAAATTAAATAATGTCATGCTTTATAAGCATTTCATTCAATGTGACTACACACATGGATAGCATTGAGGATGATATTTCACTTTTTCCATGTGCAGATTTAATACCACACAAAAATTTGAGTCCCCTATTGCTAATTTTCCACCATGTGGTAACTATTTAGTTGTTGTTTTTTTTTTTTTTAAG----TTACTGAATTACAGTATTGAATTACAGAGCATAGCAACTACCAGTGGGCGTTGGGTCTATGTATGTCTCCCTGGCTTAGCACAGGGTCACATATACTGGCATTAAATCACACCAGTATTCCTAC-GCTGAACTGGTTAGGTTAGCAGAGGAATGAACATGCTAGTTTGCAAAATTGCATGCTTATGTACTCCTAAAAATAGAGAATATTAATGTCAGATTTGATTGATGTGACTCCATCAGGTTCCTGCCATTTTAGTACACCT .::..........x..:::..:.x.xxx.:.:x..::...x....x:x.-----.x:.....::...........:....:...:...x:x...x.:x....:.x.....::.....:....:.........:.............:...................:...:::...:x.........x:...........:......x.:.........:..::..............:.:..:..:x......xx.........................:.:.........---------.x........:----....::........x:.:..:..x.....-::....:...:x..x:..:x.x....x:...-:.:..:.::.........x.x.....x...:x:xx....x......:::x.......:::.:-..x.x....::.-.x..xx..x.:.......x:..--..........::::......x...:...:........----------------.........x:...x......x...::...:x:...x...x:xx..... 49M5I239M9I11M4D29M1I31M1I62M1D12M1I22M2I37M16I49M 402/541 74.3% 576/94230402 0.0% 40/541 7.4% 125253409 64961146 +3000 chr4 + 190214555 189830316 189830315 189830378 63 AAAAATAGAGAGGGCAAAAGTAAAAAGAGAGAGAAAAAAGCAAATAAGAGAGAAAAAGGAAAA chr4 + 94230402 60497957 60497956 60498019 60497957 60497956 60498019 63 AAAATAAGGGAGGGCAAAAGGAAAGAGACAGAGAAGAGCGATAAGGGGAGAGACAAAAAAAAA ....xx..:...........x...:...x......:.:x.xx..x::......x...::.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 129332359 60882196 +3505 chr4 + 190214555 189855215 189855214 189855287 73 TGCACCTGTAGTCCAAGCTGCTTGGGAGGCTGAGGCTGGAGGATCACTTGAGCCCAGGAAGTCGAAGCTACAG chr4 + 94230402 76033205 76033204 76033277 76033205 76033204 76033277 73 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .....x......:.x....:....::........x.:x.x.:.x.......:.....:.:x.:x::...::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 113822010 76392545 +3019 chr4 + 190214555 189861320 189861319 189861382 63 AGGAGAGAAAGAAAGAAAGGGAAAAAGAAAGAAAAAAGGAAAGAAAAGGACAACATAGTAACA chr4 + 94230402 2460294 2460293 2460356 2460294 2460293 2460356 63 AAGAGAGAAAAAAAAAAATGGAATAATGGAAAAAAAAATTTAAAAAAAGCCAACACAGCAACA .:........:...:...x....x..x::.:......:xxx.:....:.x.....:..:.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 187401026 2813529 +4066 chr4 + 190214555 189875379 189875378 189875457 79 GTGATGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTAGAGGTTGTAG chr4 + 94230402 76033201 76033200 76033277 76033201 76033200 76033277 77 GTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ...:....:.--......:...........::........x.xx.x...x.:...........:..x.xx:..:..... 10M2D67M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 113842178 76372377 +3106 chr4 + 190214555 189882202 189882201 189882259 58 GTATAGAGTCAAGAATAAGAAAAAGGATCCAAAGGAGAAGGAGAGAAATAAAACGGGA chr4 + 94230402 35551115 35551114 35551172 35551115 35551114 35551172 58 GTATCGATTCAAGAATAAATAAAAGGATTCTCAGGAAAGTGAGAGAAGTGAAGCTGGA ....x..x..........:x........:.xx....:.:x.......:.:..:.x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 154331087 35883468 +6705 chr4 + 190214555 189882619 189882618 189882853 235 GCTTCGGCAGGGTTA-GTGAGCCACCTTCCAAGTGTACCAATGAAGCTCTTGCCTGCTGTTTCAGATAAATGACTTTCATTTCACTGTTGGCTTGTGCTTGAGAAGGTTATTCAATTGATTCCAGTTGTTTGCAATGCCTTGAAGGCAAGTAATGTTGT---------AGCATCCACTGTC-CTCATAACACACTGTTTCTTTTCTAAGGAAGGTTGTTGTCATAATACCCTAGATATCCACAGAA chr4 + 94230402 64588351 64588350 64588583 64588351 64588350 64588583 233 GTTTTGACAGGGTTAAGTGCACAGTCCTCAGACCATGCA--------TCTGTACTGCCCATTCAGATAAATGGGTTTCATTTTATTGTTTACTTGTACTTGATAAGGTTTTTGGATTGATTCTGGTGGCTCACAATGCCTCCCAGGCACAGGATGTTATTCTTACTACTGCATCCAAAGTCTTTCACAACA----GTTTTTTCTCTAAGAAAGGCAGGCACTGTGAAACTC-AAATATCAGCAAAA .:..:.:........-...x:.x::.:..x:.x::.:.x--------...xxx....:xx............:x........:.:....x:.....:.....x......x..x:........::..x.:.::........:xx.....x:x:.....:.---------x.......xx...-:...:....----....:..:......:....:x.x:::::.:.x..:.-.:.....x:..:.. 15M1I23M8D112M9I13M1I9M4D36M1D14M 152/222 68.5% 233/94230402 0.0% 24/222 10.8% 125294268 64920287 +4728 chr4 + 190214555 189893736 189893735 189893934 199 TGCGCCTGTAGTTCCTGCTACTCAGGCTTCTGAGGCAGGAAGATCCCTTGAGCCCAGGAGTTCTGGGCTGCAGTGTGCTGTGTTGATCAGATGTCTGCATGAAATTAGACATTAGTACAGTGACCTCCCGGGATAGGGGACTACCAGGTTGCCTAAGGAGTGGCGAACCGGCCAACAGGGGGGTCGCGCCCGTGGACAG chr4 + 94230402 76033205 76033204 76033403 76033205 76033204 76033403 199 TGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAGAACATGATGCCAAGCAGATGTGTGCCCTAAGCCTGCTCCCAGCATGGTGACTGCAGAGAGCTTGGGGTCACAAGGCTGTCTGAGGAGAGACAGCGGGTCTGATAGTTAGGTCTTGTTAGGGAATAG ...:.x.........x......::::xxx.....x.xx.x::.x.x.....:.....:..:.:.......:..x::::x:..:::.x.......x...x:x..:::x.x:x::..:.::.....:x.xx:.:::xx...:::..x...:..:..:.....x.:.::xxx.x.::.:..xx:....x:.::x.x.:.:.. 199M 110/199 55.3% 199/94230402 0.0% 0/199 0.0% 113860531 76354024 +3317 chr4 + 190214555 189897698 189897697 189897803 106 CAAAAGTAAATAAATAGAAGGCAGGAAGGGAGAAGGAGAAGGAAGGAAGGAAGGATGGAAGGAAGGAAAGAAGGAAGGAAGAAAGGA-AGGAAGGAAAGAAAGAAGG chr4 + 94230402 15855374 15855373 15855480 15855374 15855373 15855480 107 CAAGAGTAAAGAGAGAGAAGTGGACAAGAAAGACTTGGACAAGTCAAGGGAAAGATCCAGAGAGAGAGAGAAGAAAGAGGAAAAGGACAGGAAAGAACGAAAAAGGG ...:......x.:.x.....xx::x...::...xxx:..x:::xx:.:....:...xx.::..::..:.....:...::::......-.....:...x....:.:.. 87M1I19M 66/106 62.3% 107/94230402 0.0% 1/106 0.9% 174042324 16172231 +4137 chr4 + 190214555 189897900 189897899 189898094 195 GGAAAGGAAAGAAAGGAAAGGAAAGGAAAATAAATGAAAGGGAGGGAA--GGAAGGAAGGAAGAAAGGAAGGAAGGA--------------AGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAA chr4 + 94230402 59372544 59372543 59372754 59372544 59372543 59372754 211 GAAACCGGGAGAAAGTAATGCGAGGGGAAGTAATAGGAAGGAAAAACACCGAAAGCAACGAATAATAAAAGGAAAAATAATAATAATAATGAGGGGGGCGAGGGGGGAAGAAAAAAATAATAAAAGGGAAAATAGTAATAAAAGGGTAAGTAATAAAAGGAAAATAATAACAGGAAGAAATAACAAAGGGTAAATTTAATAAGAGGAAAAA .:..xx.::......x..x.x:.:..:..:...xx.:....:.:::x.--.:...x..x...x..x::......::.--------------......:x...:.:.:......:.:.x.:x..:.::....:x.:x.:x..:::::x...x..x:..:.:..:.x.:x:.x..:......x:.x.:.::.x...xxx.:x....::.:... 48M2I27M14I120M 114/195 58.5% 211/94230402 0.0% 16/195 8.2% 130525356 59689199 +3700 chr4 + 190214555 189897907 189897906 189898088 182 AAAGAAAGGAAAGGAAAGGAAAATAAATGAAAGGGAGGGAAGGAAGGAAGGAAGAAAGGAAGGAAGGAAGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAA chr4 + 94230402 49044653 49044652 49044827 49044653 49044652 49044827 175 AAAGATTAAAGAGAAAAGAATAAGAGATTAG-GGGTGGTTAGAAAGACAAGTAGTGAGAA--GCACTAAGTGAGAAAGGGAAGAGTTAAAGAAAGA---AGAAAGGTGAAAAATGAAAGAAAAGAAAGAATGAAGCAGA-AAACTGAGACTAGGAAGAGGGAAAATGAGCAATAAGCATAAA .....xx::.:..:....:.x..x.:..x.:-...x..xx..:...:x.:.x..x:..:.--.x.xx...x.:...::.::...:xx.....:...---......:x::...:x.....:......:...x....x.:.-...xx..:.xx.:...:..::.:..x.::x.:x...x.x:.. 31M1D28M2D34M3D40M1D42M 109/175 62.3% 175/94230402 0.0% 7/175 4.0% 140853254 49361301 +3081 chr4 + 190214555 189897948 189897947 189898019 72 GGAAGGAAGGAAGAAAGGAAGGAAGGAAGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAG chr4 + 94230402 10675421 10675420 10675492 10675421 10675420 10675492 72 GGGAAGAAGAGAGAAAGGAAAGAAGGAGGGGGGAGGCAGGGGGGAGAAGAAATGAGTATGAGTCAAGGTAGG ..:.:....::.........:......:......:.x::.:.::....::.:x...x.x..:xx..:.x.:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 179222527 10992028 +3184 chr4 + 190214555 189897959 189897958 189898041 83 AGAAAGGAAGGAAGGAAGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAG chr4 + 94230402 56414919 56414918 56415001 56414919 56414918 56415001 83 AAAAAGGAATAGAGAAACATGGCAGAGAGAAAAAGAAAGGGAGATAAGGCCAAAATTAAAACTCAAGGAAAGTATGACCGAAG .:.......x::..:..x:x..x.......:........:....x..:.xx.:..xx...:xxx........x.x..xx.... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 133483040 56731515 +3076 chr4 + 190214555 189897972 189897971 189898067 96 GGAAGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAA chr4 + 94230402 1053161 1053160 1053256 1053161 1053160 1053256 96 GGGAGGGGAACGAGATCATGGAAAGAAGAGAGATAGAAAGATAGAAATCCAGAGGAAGGGGGAGAGGGGCAAAGACATGGGAAGGAGACAGACAAA ..:.....:.x....xx:x:::..::.......x.......x.....xxx.:.....:.::.::...::x:..::x.x.:...:..:.x.:.x:.. 96M 58/96 60.4% 96/94230402 0.0% 0/96 0.0% 188844811 1369744 +3545 chr4 + 190214555 189898038 189898037 189898125 88 GAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAA chr4 + 94230402 58935728 58935727 58935813 58935728 58935727 58935813 86 GAAGAAAACAGTGACTAAGGAAAAATGAAGAGGAAGGAAAATAAGAAAGTAAAGGAA--GAAGAAATAATGCAAGGGAAAAAGAGGAA ....:...x.:x..xx...:..:..x::.:..:.......:x.......x....:..--:......x..x.x...::.:......:.. 57M2D29M 61/86 70.9% 86/94230402 0.0% 2/86 2.3% 130962310 59252245 +3129 chr4 + 190214555 189898068 189898067 189898146 79 AGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAAGA-AAGAAAGAAAGAA chr4 + 94230402 75241514 75241513 75241593 75241514 75241513 75241593 80 AAATAGGAATTATAGACAGAAAGAAAAAGGAAGAAAGAAAAAAATAGGACCAGAGAAAGCAAAACATAAGGGACAATGAA .:.x.....xx.x...x.....::.....:..........:...x.:::xx........x....x.-...::.x..x... 66M1I13M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% 114656554 75558001 +4632 chr4 + 190214555 189941006 189941005 189941076 71 AGCCATGGCCGAGTACTCCTACGTGAAGTCTACCAAGCTCGTGCTCAAGGGAACCAAGACGAAGAGGTGGG chr4 + 94230402 64604687 64604686 64604757 64604687 64604686 64604757 71 AGACATGGCGGAGTACTCCTGCGTCAAGTCCACCAAGCTCGTTCTCAAAGGGGCGAAGGAGAAGAGGTGAG ..x......x..........:...x.....:...........x.....:..::.x...:x.........:. 71M 58/71 81.7% 71/94230402 0.0% 0/71 0.0% 125336319 64878236 +4805 chr4 + 190214555 189943201 189943200 189943286 86 GTAAGAAGAAAAAGAGCAAAGATAAGAAAAGAAAAAGAGAAGAAGATGAAGAAACCCAGCTTGATATTGTTGGTGAGTCAGTTTTC chr4 + 94230402 64604999 64604998 64605083 64604999 64604998 64605083 85 GCAGCAAGAAAAAGCACAAGAACAAGAAAAGGAAAAGGGACGAGGATGCAGAAGAGCAGCTTGATATCGTTGGTGAG-CAGCTTTC .:.:x.........x:...::.:........:.....:..x..:....x....:xx...........:.........-...:.... 77M1D8M 67/85 78.8% 85/94230402 0.0% 1/85 1.2% 125338202 64876353 +3230 chr4 + 190214555 189946372 189946371 189946428 57 TGGGCTGCATTCACAGCTGGCCTGGGCCACATGTGGCCCTCAGGTTGGACAAGCCTG chr4 + 94230402 13446341 13446340 13446397 13446341 13446340 13446397 57 TGGGCTGCATTGCCAGCTGTGCTGAGCCACATGCAGGCTGCAGGTTGGATGTGCCTG ...........xx......xx...:........::.x.:x.........::x..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 176500031 13714524 +8251 chr4 + 190214555 189952135 189952134 189952311 177 AGTTGAAATATTGATTTTATTT--TTTAGGAATCTGGTGGACAGTAACAAACTTTGGTGAAATTTCAGGAACCATAGCCATTGAAATGGATAAGGGAACCTATATACATGCACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAGAAGGTTTGTGTCTGGAA----GGGAAGAGGC chr4 + 94230402 64606937 64606936 64607116 64606937 64606936 64607116 180 AACTGCAATGGTTATTCTGTTTGTTTTAGGAAACTGGTGGGCTGTCAGCAATTTCGGTGAAATTACAGGAACTATAGCTATAGAAATGGATAAAGGAGCTTACATCCATGCCCTTGATAATGGCTTGTTTACGCTTGGAGCACCACACA---GAGGTTTGTTTCAGAAAATTTGGAAAAAAGC .::..x...:x.x...:.:...--........x.......:.x..x.xx..:..:.........x.......:.....:..x...........:...:.:..:..x.....x..:..:.....::.x.....x..x.....x.......---:........x..x.:..----..:..:.:.. 22M2I125M3D17M4I10M 133/174 76.4% 180/94230402 0.0% 9/174 5.2% 125345198 64869357 +4221 chr4 + 190214555 189953066 189953065 189953148 83 AGTTGATGAGGGCCCTAGTCCTCCAGAGCAGTTTACGGCTGTCAAATTATCTGATTCCAGGTGAGCTTATGTTGTAATATAAT chr4 + 94230402 64608017 64608016 64608095 64608017 64608016 64608095 79 AGATGACGAAGGCCCTAGTCCTCCTGAACAGTTTACTGCCGTCAAGTTGTCTGATACAAGGTAA----CTACTGTAACAAAAT ..x...:..:..............x..:........x..:.....:..:......x.x....:.----x.::.....:.x... 64M4D15M 62/79 78.5% 79/94230402 0.0% 4/79 5.1% 125345049 64869506 +9327 chr4 + 190214555 189955035 189955034 189955156 122 AGAATCGCCCTGAAGTCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGGACTTGTTGTTGGGCGTTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATGTAAG chr4 + 94230402 64608259 64608258 64608380 64608259 64608258 64608380 122 AGGATTGCTCTGAAGTCTGGTTATGGGAAATACCTGGGTATAAATTCAGATGGACTTGTTGTCGGGCGTTCAGATGCTATAGGATCAAGAGAGCAATGGGAACCTGTCTTCCAAGATGTAAG ..:..:..:...........:.....:.....:..x..........................:..............x..x...:.......:...........x.....:...:....... 122M 107/122 87.7% 122/94230402 0.0% 0/122 0.0% 125346776 64867779 +7686 chr4 + 190214555 189957396 189957395 189957521 126 AGGGGAAAATGGCTTTGTTGGCCTCAAATAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGATCAAGGTAATGATGACATTTTATA chr4 + 94230402 64608758 64608757 64608883 64608758 64608757 64608883 126 AGAAAAAAATGGCATTACTAGCAGCAAATAGTCGTTTTATTAGATGTAATGAAGATGGAGACATAGAAGCCAAAAGCAAAACTGCAGGGGAAGAAGAAATGATAAAGGTAATTACAATATTCTACA ..:::........x..::.:..xx.......::.:...........:.......xx..:...........x.....:.....x.....:..............x........x.::.:...:..:. 126M 99/126 78.6% 126/94230402 0.0% 0/126 0.0% 125348638 64865917 +8175 chr4 + 190214555 189960724 189960723 189960846 123 TGGATTCTCTTTTCCAATATCTAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTAAAACAATGTGAAATCAATTATGTGTATGTA chr4 + 94230402 64609594 64609593 64609715 64609594 64609593 64609715 122 TGTATTTTCTTTTCAATTA-ATAGATTCGAACTTGTGCTGAAAGAGAAACTAAGAAGAAAGATGATGTTCCACAGGAAGACAAAGGAAATGTTAAACAGTGTGAAATCAACTATGTGTATGTA ..x...:.......x.x..-x......x..x.:.................:.....:........::.....x.:.................x.....:...........:............ 19M1D103M 105/122 86.1% 122/94230402 0.0% 1/122 0.8% 125351130 64863425 +6349 chr4 + 190214555 189961810 189961809 189961935 126 TTTTCTTTACAGAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGACAGTAAAATTCTTAAAAAGGCTCGGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAGGTA chr4 + 94230402 64610695 64610694 64610820 64610695 64610694 64610820 126 TTCCCCTTATAGAAAGAAATTCCAAAGTTTCCAAGACAAAAAGCTGAAAGTAAGCAAAGAAGATACAAAAGCCCTCCGAAAAGCCAGGAAAGAAGGCACTTTTCATGAAGCACTGCTTGACAGGTA ..::.:...:...........:..:..:.........x.x..:..x...:....:........:.xx...:::..:x:...:..:x.......x..xx:...x.....::.:..x..x........ 126M 91/126 72.2% 126/94230402 0.0% 0/126 0.0% 125351115 64863440 +3450 chr4 + 190214555 189963008 189963007 189963167 160 TTTTAAAGCTT--TTTATATTTAGTAGCAGTTGAA---TATATATGGCATGTT----TTACATAGATTAATTTTATTTTTCTTTGTTTAAACAGGAGAGCCAAATTGAAAGCCGACAGATACTGCAAGTGACTGGGATTTTTGTTTCTGCCTTATCTTTCTGTGTTTTT chr4 + 94230402 64611637 64611636 64611797 64611637 64611636 64611797 161 TTTCAATGCCTGCTTAAGATTTAGAGGCAAATAAAATATTCAGATGTAATGTTCAGTTTTTAATGTTTTGTTTCGTTCCTCTTT--CCACACAGGCGAGCAAAAGTGAAAGCAGATAGATACTGCAAGT------GATAACCAGTTCGCCCATTTTCTTCTGCGTCTTT ...:..x..:.--..x.x......x:...:x.:..---.x:.x...xx.....----..x:.xx.x..x:...::..::.....--::.x.....x....x...x.......x..:.............------...xx:::x...xx..x.x.::.....:..:... 11M2I22M3I15M4I27M2D43M6D34M 104/152 68.4% 161/94230402 0.0% 17/152 11.2% 125351371 64863184 +3096 chr4 + 190214555 189996973 189996972 189997042 70 CGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG chr4 + 94230402 76033197 76033196 76033264 76033197 76033196 76033264 68 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG .::.....:.x:..--......:...........::........x.xx.x...xx:.x.......:.:.. 14M2D54M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 113963776 76250779 +3002 chr4 + 190214555 190004809 190004808 190004869 61 AAATAGCCTACCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 + 94230402 59222798 59222797 59222858 59222798 59222797 59222858 61 AAACAGTAAACTAAGCAAAGGAGGAAATGGAGGGAAAAAAAAGAAGAAGAAAAAAAAAAGA ...:..:xx..:.......::.::...x::.:::........:..:..:..........:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 130782011 59432544 +3561 chr4 + 190214555 190032252 190032251 190032325 74 GTGCACGTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCGCTGGAGCACAGAATGTCAAAGCTGCAG chr4 + 94230402 76033204 76033203 76033277 76033204 76033203 76033277 74 GTGCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG ..........:..:...........::........x:xx.x...x.:..x..:.x.....xx.:x::....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 113999048 76215507 +3454 chr4 + 190214555 190037163 190037162 190037245 83 CGTGGTGGCACATGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAAGCGGAGGTTGTGG chr4 + 94230402 76033197 76033196 76033277 76033197 76033196 76033277 81 CACAGTGGTGCACG--TGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAGCTTTGGGCTGTAG .:::....::..:.--......:.:.........::........x.xx.x...x...........:.:.:x:xx:..:...:. 14M2D67M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 114003966 76210589 +3097 chr4 + 190214555 190093885 190093884 190093943 59 GCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCAAGGAG chr4 + 94230402 76033206 76033205 76033264 76033206 76033205 76033264 59 GCACGTGTAGTTCCAGCTACTTGAAAGGCTGAGCCCTGTGAAGCACTTGAACCCAGAAG ....x......:...........::........x.xx.x...xx:.x......x..:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 114060679 76153876 +5712 chr4 + 190214555 190109421 190109420 190109687 267 TTTGAGTGTCCTATTATTTCTTTCAATTATGGCCTGTCCTTGGGAATTATAAGGGATTCCTGTTGTATGTGTAATTTTCCACTGATTTAAGAATTTTTGGAATGCTTTACTATAGTAGCCTGGTCCATTATCTGTTTTAATTTTTTCTGGAACTCCCATGACAGCAAAACAAGATAATAAATGTCTTTTAACATGGGAAGTACATTTTCT----GTCTAGCAGGTTGCCCATATGAAATGTGAACAAGTATCAACCATCACATGGACAAAT chr4 + 94230402 19065337 19065336 19065604 19065337 19065336 19065604 268 TTTTAATGTTCTATTTGCCTGTTCTACTATCGTCTGGCCTGTGGGCGAGTTCAGGATACCCGTACTGTGTTTTACTCCCCATGTTTGCAGAAACTCCCCAAGCCTACGACTAGTGTAGGCTGGGCCATTGTCTGTTTTTATTTGTAGTGGTATACCCATAACCGCAAAGCAACAACTGAGATGCCTTTCTACATGCATAG--CCTTTTCTCCAGGTTGAGC-GGTGGCCCACATAAAATGACTATATGTATCTATAGACACGTGTACCAAT ...x.:...:.....xx:::x...x.:...x.:...x...xx..:xxx:.xx:....x..:..xx.:...x.x.:.::...:xxx.x:.::..:.:::x:.::x:x:x....xx....x....x.....:........x....x.xx...x.:x.....:..x.....:...x.xxxx.:...:....:x.....x:x..--.x......----..:x...-...x.....:..:.....xxx.:.x.....x.:x:x...:..x..x... 200M2D8M4I7M1D49M 163/264 61.7% 268/94230402 0.0% 7/264 2.7% 171044084 19170471 +3122 chr4 + 190214555 47550 47549 47625 76 CAAGAACAAGAAGAACAAGAA----------CAAGAAGAAGAAGAAGAAAGAAAAGAAGAAGAAGAAAGAAGAAGGAAGAGGAAGA chr4 - 94230402 56566176 56566175 56566261 37664142 37664141 37664227 86 CAAAAACAACCACAAAAAAAAATGCTGTTCCTAAGAAAAGATAGAAGAAAGCAAAGAAGAAGAGGAAAGAAGGCTCAAAGGGGAGA ...:.....xx.x..x..:..----------:.....:.::x.........x...........:........:xxx..::..:... 21M10I55M 56/76 73.7% 86/94230402 0.0% 10/76 13.2% -56518626 -37711776 +3115 chr4 + 190214555 47625 47624 47690 66 AGGAAGAAGAACAAGAGGAAGAAGAAGAAGAAGAAGACGACGACGACGACGACAGGGGCCTGAGCT chr4 - 94230402 2552181 2552180 2552246 91678157 91678156 91678222 66 AGGACGAAGAAGAAGGGGAACCAACAGAGGATGAAGACGCCCACAACGATGGCAAGAGTCTTGGCT ....x......x...:....xx.:x...:..x.......x.x..:....:.:..:.:.:..x:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -2504556 -91725846 +3118 chr4 + 190214555 66296 66295 66388 93 CATTTTCATCTCTTGTCTATTAGTCATGTAACTTTTTGTTTTTTTTTTTGGAGTTGTTCTGGATGTTATCTTCTGTCAAATATATGTATATTT chr4 - 94230402 76326363 76326362 76326455 17903948 17903947 17904040 93 CACTTCCTGATCTTATCTTGAAGCTACATCACCTTTTTTTTTTTTTTATGGAATTGTACACCATGATAATACCTGCACAATATATGTTTATTT ..:..:.xxx....:...xxx..::.::.x..:....x.........x....:....x.xxx...x..x:x:...:xx.........x..... 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% -76260067 -17970335 +3004 chr4 + 190214555 82344 82343 82397 54 CTACAAAAGTCCATTTTTTTGGTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 60254021 60254020 60254074 33976329 33976328 33976382 54 CCACAGAAGCAGGGTTTTTTTGTGTGTGGTTTTTGTTTTTCTTTTTCTTTTTTT .:...:...:xx:x......x..x..........x.....:.....:....... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -60171677 -34058725 +3390 chr4 + 190214555 82473 82472 82538 66 CTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTGTCGAGTAGCTGGGATTACAGGCATGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::........:.x...x.xx.x........x..:.........:.:....--.:........ 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -18114666 -76115736 +3033 chr4 + 190214555 83595 83594 83667 73 GGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAACAAG chr4 - 94230402 17904556 17904555 17904628 76325775 76325774 76325847 73 GGGTGACAAGGATAAATGACTGCTGAAGATTAAAAAGAAAAGAAAAAAAAAAAAAGAGAGAACTCAGAACAAG ........::.xx.:.:xx.xx..x..:.xx.....:....:.........:.....:....xxx.:...... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -17820961 -76409441 +3025 chr4 + 190214555 89895 89894 89970 76 ATTGTATAATTTCTCTTTTCTTTTCTCTTTCTCTTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193293 40193292 40193368 54037035 54037034 54037110 76 ATTATTGGAGTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTT ...:.xx:.x..x.:.:x..........:...x.::...x:.::..xx::..:x:................:.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -40103398 -54127004 +3155 chr4 + 190214555 89904 89903 89984 81 TTTCTCTTTTCTTTTCTCTTTCTCTTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT---GAGATTGGGTTTCA chr4 - 94230402 40193306 40193305 40193389 54037014 54037013 54037097 84 TTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGAAAATGGACTTTA ....x::...::.:.....x...:..x:.:..:xx:...:x:................:.....::.---..:.x...::..:. 67M3I14M 55/81 67.9% 84/94230402 0.0% 3/81 3.7% -40103402 -54127000 +3193 chr4 + 190214555 89906 89905 89978 73 TCTCTTTTCTTTTCTCTTTCTCTTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATTGG chr4 - 94230402 60441032 60441031 60441104 33789299 33789298 33789371 73 TCTTTATTCTTTCCTCTGTTTCTTCTGCCCTAGTATTATTTCTTTTTTCTTCTTTTTTTTCATTACAGCTTAG ...:.x......:....x.:......x:.:.xx.x..x...:......:..:........:x..xx..x..:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -60351126 -33879276 +3002 chr4 + 190214555 89921 89920 89975 55 CTTTCTCTTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAT chr4 - 94230402 2110808 2110807 2110862 92119541 92119540 92119595 55 CTTTCTCCTCAATGCCTTTCTTTATTTCTTTTTTTTTTTTTTTTCACTTTAAAAT .......:..xx.x::.......x...:................:x:...:.:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -2020887 -92209515 +3241 chr4 + 190214555 91687 91686 91766 80 TCCATATAAAATGGAAAG--------AGAACAAAAGACATAAAAAGAACAAAGGAAAGAATGTAAAATAAGAGAGGAAAAAGGAAGCA chr4 - 94230402 9363457 9363456 9363542 84866861 84866860 84866946 86 TCTATTTTAAATGCAAAGTTAAAAACAAAACAAAAAACACAGAAAGAACAATGAGAAGAATATGAA--AAAAAAGCAAAAGGAAATCA ..:..x.x.....x....--------.:.......:...:.:.........x.::......:.:..--..:.:..x....:.:..x.. 18M8I40M2D20M 59/78 75.6% 86/94230402 0.0% 10/78 12.8% -9271770 -84958632 +3051 chr4 + 190214555 96610 96609 96669 60 GATTTTATACACACACACACACACACACACACACACACATATATACATTTTTTTTTTTTT chr4 - 94230402 33661785 33661784 33661844 60568559 60568558 60568618 60 GACTTTATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT ..:..........:...........x.x.:.:.:.:::...xx:..xx.....:...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -33565175 -60665227 +3752 chr4 + 190214555 113674 113673 113840 167 AAAGAGACATAGCCTTCAATACAATTAAAGATACAGAACAAAGCAAA-AGATTGTATCACTGTTTTCTTTCTTTTTTCTTTCTTCTTTCTTTTTTTCTTTCTTTCCTTTCATTCTTTCCTCTCTTTCTTTCTTTCCTT--------CTTTCTTCTTTTTTTGAGAGAGGGTCTCTC chr4 - 94230402 35294531 35294530 35294697 58935706 58935705 58935872 167 AAATAGATGTTTCTTTCAATA---------ACAAAGAGGACAACAAGGAGAGTCAATTCCTGCACAATTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCCAAAGAGACTTTGTC ...x...::.xx.:.......---------.:.x...:x.x.:...:-...x.xx..:x...:x:xx....:.:...:.::...x:x.:x...:.....:....x.....x.x:......::..:.::x.:.......--------:........:x..::x.:....:x.:.x.. 21M9D17M1I90M8I30M 101/158 63.9% 167/94230402 0.0% 18/158 11.4% -35180857 -59049545 +3587 chr4 + 190214555 113735 113734 113821 87 TTTTCTTTCTTTTTTCTTTCTTCTTTCTTTTT--TTCTTTCTTTCCTTTCATTCTTTCCTCTCTTTCTTTCTTTCCTTCTTTCTTCTTT chr4 - 94230402 45185593 45185592 45185681 49044722 49044721 49044810 89 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCT .....::....::.xx.:..xx:.....x:..--..........:........:..:x.::.::..........xx:....:.:.:.:. 32M2I55M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% -45071858 -49158544 +3901 chr4 + 190214555 113749 113748 113837 89 TCTTTCTTCTTTCTTTTTTTCTTT----CTTTCCTTTCATTCTTTCCTCTCTTTCTTTCTTTCCTTCTTTCTTCTT--------TTTTTGAGAGAGGGTCT chr4 - 94230402 56151550 56151549 56151650 38078753 38078752 38078853 101 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACTCACGAGCATACTTGAGGAAAGGTTT .:...:..:..:.x....:...x.----x..:....x..........:..:.............:.:......x:.--------.x:.....::.:...:. 24M4I48M8I17M 67/89 75.3% 101/94230402 0.0% 12/89 13.5% -56037801 -38192601 +3319 chr4 + 190214555 133173 133172 133217 45 ATCTTAAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437733 69437732 69437777 24792626 24792625 24792670 45 ATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT ..:..:.........x........:x................... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -69304560 -24925842 +3204 chr4 + 190214555 134106 134105 134155 50 TAACAATCACCATCAATCAATGTTAAAGTTTTTTTGTTTTGTTTTGTTTT chr4 - 94230402 59103673 59103672 59103722 35126681 35126680 35126730 50 TAAAAATTATCTTCAAAAAATGTCAAAGGTTTTTTGTTTTGTTTTGTTTT ...x...:.:.x....xx.....:....x..................... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -58969567 -35260835 +3171 chr4 + 190214555 146704 146703 146809 106 TTTATTCACACTTTCATTTTTAAAAAATTTCTAATTAGAAACTTTCAAATGACTTACGTTTGCTGGGGTGTTTTTTTTTT-ATATAGCTGAGTCTCCTGTTAAAGCT chr4 - 94230402 35888596 35888595 35888702 58341701 58341700 58341807 107 TTTTATCTCACTTAGATTTATCAAAATTATCAAATTAGATTTATTCAAGTTATCAAAAACTGCTGGGGTGCTTTTTTTTTAATAAAAATAGATTGCCTACTAGAGTT ...xx..x.....xx....x.x....x.x..x.......xx:x.....:.x.::x.x:x:..........:.........-...x.:x.:::.:x...::..:..:. 80M1I26M 70/106 66.0% 107/94230402 0.0% 1/106 0.9% -35741892 -58488510 +3189 chr4 + 190214555 157064 157063 157132 69 GTTGTTTTTCTTTTTTTCTTTTTGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 40193302 40193301 40193370 54037033 54037032 54037101 69 GTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTC .......:x::....:...:.:.:.:.:..x..::::xx.:..:x:................:...... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -40036238 -54194164 +3000 chr4 + 190214555 157066 157065 157132 67 TGTTTTTCTTTTTTTCTTTTTGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 18988824 18988823 18988890 75241513 75241512 75241579 67 TGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTC ......x....:.:.xx.::.:...:..........:......:...:.x.:.x.xx..::.x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -18831758 -75398644 +3087 chr4 + 190214555 157070 157069 157132 63 TTTCTTTTTTTCTTTTTGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 37306405 37306404 37306467 56923936 56923935 56923998 63 TTACTTTATTCACTTCTGTTTTTAACTTTATTTCTTTTTCTTCTTTTTTTTCTCTTGTTTCCC ..x....x..:x:..:.....:.xx....x.........:..:........:.:..x...::. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -37149335 -57081067 +3309 chr4 + 190214555 179948 179947 180033 86 TAAAATGAAGAAAGAAAGAACAAAAGAAAGGGAGAGAAAAAGAAACAAAATGTAAGAATTTAAAAAATGAAAGGAAGAAAGGAAGC chr4 - 94230402 54811110 54811109 54811195 39419208 39419207 39419293 86 TGAAAAAAAAAAAGAGAGAACATTCGGATAGGAAGGACAAAGAAGCATAACGGAAGAAGTCAAATAAGGTACAAAACAAAGAAAGC .:...x:..:.....:......xxx.:.x:...::..x......:..x..:.x.....x.:...x..x.x.x::..x....:.... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% -54631162 -39599240 +3097 chr4 + 190214555 250139 250138 250226 88 TTTTAGAGTTTTTTTTTGCTTTTTACAAACAGTAGTATTTCATTATTTTAATATTACAAATTTATCCATCTATTTGGTGAGAGAAATT chr4 - 94230402 23242391 23242390 23242478 70987925 70987924 70988012 88 TTTTTGTGTTTTTTTTTGTTTTTTAAAATGAAAAGTAATTTATTTTTTCAATAATACACTTTTCTTTTTCTCCTGTGATAGACAAGTT ....x.x...........:......x..xx.:x....x..:...x...:....x....xx...x.::x...x:.xx.xx...x..:.. 88M 61/88 69.3% 88/94230402 0.0% 0/88 0.0% -22992252 -71238150 +3073 chr4 + 190214555 284870 284869 284949 80 CAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAGAAACAAACAAAAAACAAAAAAGATAAAA-------GGCAGAGAAAGAATT chr4 - 94230402 24662129 24662128 24662215 69568188 69568187 69568274 87 CAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAAGTACT ...................:.xx::.:x:..:......:...:.x:.:.:.....::..:x..x.-------:...::.....x.:. 65M7I15M 55/80 68.8% 87/94230402 0.0% 7/80 8.8% -24377259 -69853143 +3154 chr4 + 190214555 293237 293236 293307 71 TGTGTGTGTATATATATATACACATATATATGTATATATGTATGTGTATATATATATATATATGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::...::.::.....:.:.....x.....::...x.x......::.:.:.x.::..:.:x..:....... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -71336898 -22893504 +3030 chr4 + 190214555 293245 293244 293300 56 TATATATATATACACATATATATGTATATATGTATGTGTATATATATATATATATG chr4 - 94230402 65232559 65232558 65232614 28997789 28997788 28997844 56 TATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTG ..........:.:......xx.:xx...:.............x.x:...:...:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -64939314 -29291088 +3587 chr4 + 190214555 293266 293265 293388 123 ATGTATATATGTATGTGTATATATATATATATATGTGTGTGTGTGTATATATATATACACACACACACAGTAGACTACTATTCAGCCATAAAAGAAAAGGAAATCTAGCCATTTACAACCTGG chr4 - 94230402 8395788 8395787 8395892 85834511 85834510 85834615 105 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACA---------------CAGACACAAATGAATAAAAAACCCAAAC---TACATTCTGG ....:.:.....:..::..x.:..:...x..:..:...:..:x.::..xx...:.:...........---------------...x..:...x...x.::...:.:.:x.---....x:.... 67M15D28M3D10M 73/105 69.5% 105/94230402 0.0% 18/105 17.1% -8102522 -86127880 +3258 chr4 + 190214555 294090 294089 294150 61 CTCCCAGGTTCAAGTGATTCTCCGGCCTCAGCCTCCCAAGTAGCTGG-ATTACAGGCGCCCC chr4 - 94230402 18197139 18197138 18197200 76033203 76033202 76033264 62 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.::..........x...x.x..x........::...........-.:....x.:..x.. 47M1I14M 48/61 78.7% 62/94230402 0.0% 1/61 1.6% -17903049 -76327353 +3670 chr4 + 190214555 299404 299403 299495 92 TATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATACACATATATACACATATGTGTG chr4 - 94230402 61485374 61485373 61485460 32744943 32744942 32745029 87 TATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTC-----TGTAGATGTATAGATAGATAGGTGTACATTGTTGTG ....:...:.......:..::....x.:.......:...:...x....:x.-----....x..:....x.:.x...x:.::....xxx.... 51M5D36M 63/87 72.4% 87/94230402 0.0% 5/87 5.7% -61185970 -33044432 +3298 chr4 + 190214555 299404 299403 299487 84 TATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATATATATACACATATATACACA chr4 - 94230402 35554958 35554957 35555041 58675362 58675361 58675445 84 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x......x.:x:::.:.:.:........x..:.........::.....x.x.......x.x..x:.x::x..x...:.x... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -35255554 -58974848 +3066 chr4 + 190214555 299405 299404 299467 63 ATATATATATACACATATATACACATATGTGTATATATATATATATACACATATGTGTATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x...:.x.........::...:x..::x.:....x......:::.:...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -17221344 -77009058 +3366 chr4 + 190214555 299419 299418 299530 112 ATATATACACATATGTGTATATATATATATATACACATATGTGTATATATA--TATACACATATATACACATATGTGTGTATATATACACACATATACGTATATATGTGTATAT chr4 - 94230402 82359692 82359691 82359805 11870598 11870597 11870711 114 ACATATGCACATGTGTTTTAATATATTTGTTTCCCTGCATGCGTAGAGATAAATATACACAAATATTCACAAATGCATGCAGCAGCCCGCACATGTATGCTTATTGCTGCATGT .:....:.....:...x.xx......x.:.x.x.x:::...:...x.x...--........x....x....x...::..:.xxx::x.:.....:..:.:x...xxx..:..:. 51M2I61M 73/112 65.2% 114/94230402 0.0% 2/112 1.8% -82060273 -12170129 +3441 chr4 + 190214555 299448 299447 299519 72 TATACACATATGTGTATATATATATACACATATATACACATATGTGTGTATATATACACACAT-ATACGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:.::.....:x........:..::...x......xx:::...:.......:...x......:-...:..... 63M1I9M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% -37063592 -57166810 +3048 chr4 + 190214555 299456 299455 299498 43 TATGTGTATATATATATACACATATATACACATATGTGTGTAT chr4 - 94230402 64433220 64433219 64433262 29797141 29797140 29797183 43 TGTGTGTATATATATCTACACATACACACGCATACGTATGTAT .:.............x........:.:..:....:..:..... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -64133764 -30096638 +3044 chr4 + 190214555 310161 310160 310216 56 TTTATGTTTAATTTCTTCTTCACTTTTTTTTCTTTTTTTTTTTTTCAGACAGAGTC chr4 - 94230402 86077732 86077731 86077787 8152616 8152615 8152671 56 TTTTTGTCTAATCCCTTCTTTGTCTTTATTTCTTTTTATTTTTTTCAAGTAAAATC ...x...:....::......::::...x.........x.........:::.:.:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -85767571 -8462831 +3013 chr4 + 190214555 313870 313869 313998 129 GCATATACATAATCAATAAATAAGAAGAAACAAGTGGAAGTAAAAAAAGAAAAAGAAGAAGGAAAAGAAGGAGGAAGAGGAGGAGGAGAAGAAGAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGGGGT chr4 - 94230402 81502100 81502099 81502228 12728175 12728174 12728303 129 GCAAATACGAAATCAGTAAGATGGCAAAAGCTGGAGATTAAAGAAAGATAAAAATAAGCAGAAGAAGAGGGGTGAGGTTTAGACAGTCACGAAGAGGGAAGGATGGGTGGAGTGGAAAATGGAAGTGGT ...x....:x.....:...:xx:.x.:..:.x:.x.:xx:x.:...:.x.....x...x..:.:....:..:x..:.xxx..:x:.xx.x.....:...:.::x:..x...:x:::..:x:....x... 129M 74/129 57.4% 129/94230402 0.0% 0/129 0.0% -81188230 -13042172 +3148 chr4 + 190214555 318479 318478 318539 61 CTCCTGCTTACAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...xx.x....::x...x.xx.x........::...........:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -17878660 -76351742 +3718 chr4 + 190214555 331615 331614 331675 61 CTCCTGGGTTCATGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGTGCGC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.........x.:.x...x.xx.x.........:...........:......x....:. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% -17865524 -76364878 +3867 chr4 + 190214555 346825 346824 346894 70 CTGTGTATGTGTGTGTATATATATATGTATATACATGTATGTATATATATGTATACACACACACACACAC chr4 - 94230402 8395786 8395785 8395855 85834548 85834547 85834617 70 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACAC .::...:...:.....::...x.:......x.....:.:.:.::x..:..xx.................. 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -8048961 -86181441 +3251 chr4 + 190214555 346840 346839 346894 55 TATATATATATGTATATACATGTATGTATATATATGTATACACACACACACACAC chr4 - 94230402 25393254 25393253 25393308 68837095 68837094 68837149 55 TAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ..x.x..:.:..:..:.::..........x.:.:....:..........:..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -25046414 -69183988 +3811 chr4 + 190214555 353536 353535 353618 83 CTGCAACCTCCACCTCCTGAATTCAAGTGATTTTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:...::........x..:x.xx.x........:............:......--:...::....::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -17843590 -76386812 +3032 chr4 + 190214555 369724 369723 369782 59 AATTTCTTAAAGAGATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 - 94230402 92735341 92735340 92735399 1495004 1495003 1495062 59 AACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ..::....:x.x.xx.....:...:..:.:..........x....:.x.........:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -92365617 -1864785 +3226 chr4 + 190214555 369738 369737 369785 48 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735353 92735352 92735400 1495003 1495002 1495050 48 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG ..x.....:...:..:.:...............:.x.........:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -92365615 -1864787 +3306 chr4 + 190214555 424696 424695 424785 90 TGGCACCATCTCAGCTCACTGCAACCCCCGCCTCCCAGGCTCAAGCAATTCCCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGATGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:...x.:------..:..:...xx:x..:.::..:.....::x...x.xx.x........:..:.........:.:....x:... 12M6D72M 58/84 69.0% 84/94230402 0.0% 6/84 7.1% -17772418 -76457984 +3977 chr4 + 190214555 446781 446780 446848 68 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:...........::x...x.xx.x........::...........:......x.:.......:::. 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% -17750358 -76480044 +3017 chr4 + 190214555 450940 450939 450978 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -68986799 -25243603 +3192 chr4 + 190214555 460658 460657 460713 56 GAGGAGGTTTTTTGAAAAGATCAACAAAATAGATAGACCACTAGCAACACTACCAA chr4 - 94230402 10276249 10276248 10276304 83954099 83954098 83954154 56 GGGAATGTCTTTTGAAATGACCAACAAATTAGACAGACGATTAGCAATACAGCCAA .:.:.x..:........x..:.......x....:....x.:......:..x:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -9815591 -84414811 +3048 chr4 + 190214555 492163 492162 492203 41 AAAAAAAAAAAAACAAACAAACAAACAAAAAAAAAACCTTA chr4 - 94230402 40371515 40371514 40371555 53858848 53858847 53858888 41 AAAAAAAAAACAACAAACAAACAAACAAAAAACACACCTCA ..........x.....................x.x....:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -39879352 -54351050 +3167 chr4 + 190214555 492163 492162 492207 45 AAAAAAAAAAAAACAAACAAACAAACAAAAAAAAAACCTTAAATT chr4 - 94230402 70657710 70657709 70657754 23572649 23572648 23572693 45 AAAAAAAACAAAACAAACAAACAAACAAAAACAGAAGGTTAAATT ........x......................x.:..xx....... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -70165547 -24064855 +3008 chr4 + 190214555 492165 492164 492206 42 AAAAAAAAAAACAAACAAACAAACAAAAAAAAAACCTTAAAT chr4 - 94230402 52375109 52375108 52375150 41855253 41855252 41855294 42 AAAAAAAACAACAAACAAACAAACAAAAAAAAGCCCCAAAAT ........x.......................:x..:x.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -51882944 -42347458 +3152 chr4 + 190214555 492166 492165 492219 54 AAAAAAAAAACAAACAAACAAACAAAAAAAAAACCTTAAATTTCAGTTTTTTCC chr4 - 94230402 87068641 87068640 87068694 7161709 7161708 7161762 54 AAAAGAAAAACAAACAAACAAACAAAAAAAAACTCTTTTATCCTGCTCTTCTCC ....:...........................x:...xx..::::x.:..:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -86576475 -7653927 +3229 chr4 + 190214555 496788 496787 496870 83 CTGCAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTTTTGAGTAGCTGGGACTACAGGTGCCCGCCACCGCG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:...x.:xx:x..:.:.......x.:xx...x.xx.x..........::.........:......x...--.:....:.:. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -17700338 -76530064 +3043 chr4 + 190214555 516841 516840 516892 52 CAAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATAAACAG chr4 - 94230402 28063903 28063902 28063954 66166449 66166448 66166500 52 CAATATTCTGCTTTAGAAGGGGGAAAAAAAAAAAAAAAAAAAGCATAAACAG ...x.:.....:.:.:..:::::...............:..:.x........ 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -27547062 -66683340 +3080 chr4 + 190214555 571414 571413 571462 49 CAACAACAACAACAAAGAAAAAAAAAGAGAAAGAAGGAAAGAAAGAAAG chr4 - 94230402 94076891 94076890 94076939 153464 153463 153512 49 CAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAAG ................:.....:.:.....:...::..:.x...xx... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -93505477 -724925 +3113 chr4 + 190214555 571712 571711 571796 85 GGGCAATTTGAGTTTAGAGGTATGTGGGATTCTATTTCCTCTGGTAAACTTAAAAAAAACAAACAAACAAACAAAAAAAAAACCA chr4 - 94230402 38540290 38540289 38540360 55690043 55690042 55690113 71 GAGTCATTTGAGTTC--------------TTCTCTTCCTTGGGGAAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCA .:.:x.........:--------------....x..:.:.xx..x...x:x...x...........:...............:.. 15M14D56M 55/71 77.5% 71/94230402 0.0% 14/71 19.7% -37968578 -56261824 +3001 chr4 + 190214555 571757 571756 571823 67 AAACTTAAAAAAAACAAACAAACAAACAAAAAAAAAACCACCTTGATATTCCACATTAGTACATGAA chr4 - 94230402 69003171 69003170 69003237 25227166 25227165 25227232 67 AAGTTTCATCAGGAAAAACAAACAGACAAAAAAAAAGCCACCTTAATATGTCTGACTATACCATGAA ..::..x.xx.::.x.........:...........:.......:....x:.xx.:..xxx...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -68431414 -25798988 +3066 chr4 + 190214555 571765 571764 571797 33 AAAAAACAAACAAACAAACAAAAAAAAAACCAC chr4 - 94230402 71528712 71528711 71528744 22701659 22701658 22701691 33 AAAAAACAAACAAACAAACAAAAAAAAAACCAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -70956947 -23273455 +3188 chr4 + 190214555 583560 583559 583611 52 TTTTTTTCTGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTT-----ATAGAGACAAG chr4 - 94230402 71837906 71837905 71837962 22392441 22392440 22392497 57 TTTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTTAAATAGAAGCCAG ......xx..........x......................-----.....::.x.. 41M5I11M 46/52 88.5% 57/94230402 0.0% 5/52 9.6% -71254346 -22976056 +3175 chr4 + 190214555 593296 593295 593375 80 TTCTTTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTTTCTTTCCTTCCTTCCTTCTTTCTTCCTTCCTTC chr4 - 94230402 19053884 19053883 19053961 75176442 75176441 75176519 78 TTCCTTCCTT-GTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCC-TCCTTTTTTTTTCTCTGCTTC ...:...:..-x.:...:x..xx.......x.....:.:......xx.:...x.....-.....:...:...::.x.... 10M1D47M1D21M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% -18460588 -75769814 +3105 chr4 + 190214555 593297 593296 593363 67 TCTTTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTTTCTTTCCTTCCTTCCTTCTTT chr4 - 94230402 72861130 72861129 72861196 21369207 21369206 21369273 67 TTTTCTCTTCTTGCTTCCTATTTTTTTCCCTAATTTTGTTCCTTTTTCTTTGCCTCCTTCCTCTTCT .:..:::.....x.:.:..x.:...:.:...xx:...x..:..........x.:........::.:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -72267833 -21962569 +3077 chr4 + 190214555 637212 637211 637271 60 TTGCTTTGCTTTGTTTTTTGTTTTTTTTTTTATGTTTTTGGTTTTTGTTTTGTTTTGTTT chr4 - 94230402 11652011 11652010 11652070 82578333 82578332 82578392 60 TTGCTTTGTATGGATTCTTTTTTCTGTTTTGCTGTCTGTGGTTTTGGTTTTGTTCTGTTT ........:x.x.x..:..x...:.x....xx...:.x.......x........:..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -11014799 -83215603 +4006 chr4 + 190214555 639220 639219 639294 75 CTGCAGCCTCAAACTCCTGGGCTCAACAGATCCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.....:x..:..:.....:....xx.x.:.x.xx.x........::....:......:......x....... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% -17557906 -76672496 +3100 chr4 + 190214555 712414 712413 712455 42 AATATTCGTGTTTGTTTGTTTGTTTTTGTTTTTTGTTTGTTT chr4 - 94230402 56492888 56492887 56492929 37737474 37737473 37737515 42 AGCATTTGAGTTTTTTTGTTTGTTTTTGTTTTTTGTTTGTTT .::...:.x....x............................ 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -55780474 -38449928 +3065 chr4 + 190214555 727206 727205 727280 75 TGAGAGGATGTGTGTGTTAGCGAGCGTCTTTTTTTTTTTTTTTTTTTTTTT------TTGAGATGGAGTTTCAGTCTTATT chr4 - 94230402 49036842 49036841 49036922 45193481 45193480 45193561 81 TGAAAGTATGTGCGAGTTAGTGTAATTTTTTTTTTTGCTTTCTTTTTTTTTGTGGGAGTGGGATGGATTTTTATTATTGTT ...:..x.....:.x.....:.x:xx.:........x:...:.........------x..:......x...:.x.x..:.. 51M6I24M 55/75 73.3% 81/94230402 0.0% 6/75 8.0% -48309636 -45920766 +3355 chr4 + 190214555 739276 739275 739342 67 CTGTAGCCTCAACCTCCCGGGCTCCAGTGATTCTCCCACCTCAGCCTGCCAGGTAGCTGGAACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..::....:x..x..:.:...:..x....x...x.xx:x........x:..:............... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -17457850 -76772552 +3062 chr4 + 190214555 771032 771031 771080 49 TGCTACAGAGCAAGACTCCATCTCAATTTAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 40625724 40625723 40625772 53604631 53604630 53604679 49 TGCTACAGAACAGAACTCAGTCCAAGGTTAAAAAAAAAAGAAAAAAAAA .........:..::....x:..:x.:x............:......... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -39854692 -54375710 +3139 chr4 + 190214555 790928 790927 791008 81 CTCTTTTTGTCTTTTTCTCTGTCTCTCCCTCTCTGTGTCTCTGTCTCTCCCTCTGTCTTCTCTCTGTCTCTTTATCTCTGT chr4 - 94230402 20932089 20932088 20932169 73298234 73298233 73298314 81 CTCTGTGTTGCTTTGATTCTGTGTTTCTATATCTGTATGTCTGTCTCTCCTTTTATCTTCTTTTACTCTTTCATTCTTTGT ....x.x.xx....xx:.....x.:..:x.x.....:.x...........:.:.:......:.:xx...:.:xx...:... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -20141161 -74089241 +3139 chr4 + 190214555 790928 790927 791008 81 CTCTTTTTGTCTTTTTCTCTGTCTCTCCCTCTCTGTGTCTCTGTCTCTCCCTCTGTCTTCTCTCTGTCTCTTTATCTCTGT chr4 - 94230402 20931265 20931264 20931345 73299058 73299057 73299138 81 CTCTGTGTTGCTTTGATTCTGTGTTTCTATATCTGTATGTCTGTCTCTCCTTTTATCTTCTTTTACTCTTTCATTCTTTGT ....x.x.xx....xx:.....x.:..:x.x.....:.x...........:.:.:......:.:xx...:.:xx...:... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -20140337 -74090065 +3021 chr4 + 190214555 800479 800478 800525 47 TATATATATATATACACACACATATACACACACAGACACATATATGT chr4 - 94230402 85546032 85546031 85546078 8684325 8684324 8684371 47 TATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ...x..................x.........:...xx:....:.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -84745553 -9484849 +3179 chr4 + 190214555 800480 800479 800545 66 ATATATATATATACACACACATATACACACACAGACACATATATGTGTATATACATACACACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::............:.........x.:x:.x:.x::x..:......xx..:..:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -66104367 -28126035 +3049 chr4 + 190214555 800506 800505 800558 53 ACACACAGACACATATATGTGTATATACATACACACACATGTATGTATATATA chr4 - 94230402 38535895 38535894 38535947 55694456 55694455 55694508 53 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATA .:.:.:.x....:..:...x.x...:...........::.........::... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -37735389 -56495013 +3027 chr4 + 190214555 800566 800565 800606 41 GTGTGTGTGTGTGTATATATATGTATATATATATATATTAG chr4 - 94230402 9151856 9151855 9151896 85078507 85078506 85078547 41 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAG ..............:.......:x....x.:.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -8351290 -85879112 +3057 chr4 + 190214555 800743 800742 800808 66 ATATATATATATACACACACATATACACACACAGACACATATATGTGTATATACATACACACACGT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::............:.........x.:x:.x:.x::x..:......xx..:..:.:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -66104104 -28126298 +3126 chr4 + 190214555 800818 800817 800867 50 TAAATATATGTGTGTGTGTGTGTATATATATGTATATATATATATATATA chr4 - 94230402 35554958 35554957 35555007 58675396 58675395 58675445 50 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACA .........x..x.........:.:....:x..:.........::...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -34754140 -59476262 +3460 chr4 + 190214555 803758 803757 803827 70 CTCCTGGGTTCAAGCCATTCTTGTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTGTGCCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...........:xx...x::x.x........:............:.:....--....::....:::. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -17393381 -76837021 +3360 chr4 + 190214555 822195 822194 822269 75 TCTGTCTCCATCTCTATCTCTCTAACTCTCTCTGTCTCTCTCTCTCCTTCTGCCTCCACCTCTCCCTCTGCCTCT chr4 - 94230402 58681569 58681568 58681643 35548760 35548759 35548834 75 TCTATTTCTCTGCATACTTCTAGGGTTTCCTCTGCTTCGTCCTCTTCCTTTGCCTCTACCTCTTCCTCTGCCTCT ...:.:..:x.x:x..::...xx:::.::.....::..x::....:.:.:......:......:........... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -57859374 -36371028 +3660 chr4 + 190214555 822260 822259 822423 164 CTCTGCCTCTCTCTGCC---CTCTTCCTTTGTCTGTCTGTCTCTCTGTATC---CCTCTGTCTCTCCCTCTGCTCCCATCTCT----CCCTGTCTCTGTTTCTCCCTGTCTCTGTCTCCCTCTGTCTCTGTGTCTCCCTCTATCTCTGTCTCCGTCT-CTCCCTCTTTCTCTCTC chr4 - 94230402 39217063 39217062 39217237 55013166 55013165 55013340 175 CTCCGTTGCTCTCTGCTTGACCTTTTTTCTTTCTGTTGACTTCATGGTTTCAAATTTTTGTCTCCTTGTCCCCCCCCCTTTTTGTACTCCTGCTCTTGTCTTTCCCTGGCACTGTATTTCTCCATCTTAGTGTGTCCCTGCCTTTCTGTTCATGTCGACTGCCTTTCACTTTGTC ...:.::x........:---.::..::.:.x.....:x:::..x:x..x..---::.:......:::x..:x.:...x.:.:.----:....::::...:.:......x.x....x.::...::...:x....x.....x:x.:.....::x:...x-..x...:.:x..:.x.. 17M3I31M3I29M4I70M1I17M 99/164 60.4% 175/94230402 0.0% 11/164 6.7% -38394803 -55835599 +3187 chr4 + 190214555 877961 877960 878009 49 ATTTAGTTATATATATATGTGTGTGTGTATACATATATGTATTTTTAAG chr4 - 94230402 80748288 80748287 80748336 13482067 13482066 13482115 49 ATTTTTTTAAATATATATGTGTATGGGTGTGCATATATATATTTTTAAG ....xx...x............:..x..:.:.......:.......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -79870327 -14360075 +3329 chr4 + 190214555 920526 920525 920580 55 AAGGTTTAGAGCCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGGTCTG chr4 - 94230402 68384717 68384716 68384771 25845632 25845631 25845686 55 AAGGTATAGAGCCATCTTTTTTTTTTTTTTTTTTTAGGGATGTGGTTAAGGTTTG .....x.........:...................x.:..:.x:..:xx...:.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -67464191 -26766211 +3405 chr4 + 190214555 942715 942714 942798 84 CTGCAACCTTCGCCTCCCAGGTTCAAGCGATTCTCTTGCTTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCACACCACTACGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:..:..:xx:x..:.::........:.x...x.xx.x:.......::::.........:......--..::.......::.. 67M2D15M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% -17254411 -76975991 +13897 chr4 + 190214555 1022201 1022200 1022481 281 AGGCCCCCCAAAGATGGCGGACAAGGTGGTCCCACGGCAGGTGGCCCGGCTGGGCCGCACTGTGCGGCTGCAGTGCCCAGTGGAGGGGGACCCGCCGCCGCTGACCATGTGGACCAAGGATGGCCGCACCATCCACAGCGGCTGGAGCCGCTTCCGCGTGCTGCCGCAGGGGCTGAAGGTGAAGCAGGTGGAGCGGGAGGATGCCGGCGTGTACGTGTGCAAGGCCACCAACGGCTTCGGCAGCCTGAGCGTCAACTACACCCTCGTCGTGCTGGGTTAGT chr4 - 94230402 5885348 5885347 5885628 88344775 88344774 88345055 281 AGGCCCCCCAAGGATTGCCGATAAAGTGATCCACCGTCAGTCTGTGAGGCTGGGCAGGACCATCAAGCTCCTGTGCCCGGTGGAGGGCGATCCCCCACCCCTCACCATGTGGATGAAGGATGGACGGACCATCCACAGTGGCTGGACAAGGTTCCGGATCCTTCAGCAAGGGCTGAAAATCAAAGAGGTAGAGAGTGAAGATGCAGGAACCTACATTTGCAAAGCCACCAATGGTTTCGGCAGCACCAACGTGAACTACACCCTCATCGTGATAGGTGAGT ...........:...x..x..:..:...:...xx..x...x:x.:xx........x.x..::.xx:...x.x......:........x..:..x..:..x..x..........:x........x..x...........:.......xxx.x.....x:.x..x.x...:........::.x..:x....:...x.x..:.....x..x::x...:.x.....:........:..:.........x:x.:...x............:.....x.:...x... 281M 207/281 73.7% 281/94230402 0.0% 0/281 0.0% -4863147 -89367255 +3812 chr4 + 190214555 1023622 1023621 1023726 105 CACCTCCGTCTCT-CTGCAGATGACATTAGCCCAGGGAAGGAGAGCCTGGGGCCCGACAGCTCCTCTGGGGGTCAAGAGGACCCCGCCAGCCAGCAGTGGGGTGAG chr4 - 94230402 5973096 5973095 5973201 88257202 88257201 88257307 106 CATTTTCCTCTCTGTTGCAGATGACACCAGCTCAGGAAAGAACAGCCAGACACCTGAAGGCTCTAATGGAGAATATGAAGATCATTCTGGGAAGCAATGGGGTAAG ..::.:.x.....-:...........::...:....:...:.x....x.:x:..:..x:....:xx...:.:x:.x..:..:.x:x.::.xx....:......:.. 13M1I92M 68/105 64.8% 106/94230402 0.0% 1/105 1.0% -4949474 -89280928 +16836 chr4 + 190214555 1023813 1023812 1024160 348 GCAGCACGACCGCGCTTCACACAGCCCTCCAAGATGAGGCGCCGGGTGATCGCACGGCCCGTGGGTAGCTCCGTGCGGCTCAAGTGCGTGGCCAGCGGGCACCCTCGGCCCGACATCACGTGGATGAAGGACGACCAGGCCTTGACGCGCCCAGAGGCCGCTGAGCCCAGGAAGAAGAAGTGGACACTGAGCCTGAAGAACCTGCGGCCGGAGGACAGCGGCAAATACACCTGCCGCGTGTCGAACCGCGCGGGCGCCATCAACGCCACCTACAAGGTGGATGTGATCCGTGAGTGTGGCCCC--GGGCGCTGGCGGGCGGGGGGTGCTGGTGGGCGGGGGCGCTGGCGG chr4 - 94230402 5981614 5981613 5981961 88248442 88248441 88248789 348 GCAGCCCAGCCCAGGTTCACGCAGCCTGCCAAGATGAGACGCAGAGTGATCGCCCGTCCCGTCGGCAGCTCCATCCGCCTGAAGTGTGTGGCCAGCGGCAACCCACGGCCCGACATCACGTGGCTGAAGGACAATAAGCCCCTCATGCCCCACGAGATTGGGGAGAACAAGAAGAAGAAGTGGACACTGAACCTGAAGAATCTGAAGCCAGAGGATAGCGGGAAATACACCTGCCGAGTGTTTAACAAAGTTGGGGAAATCAATGCGACTTACAAAGTTGAAGTGATCCGTAAGTGCAGCTTCTATGGTGAAAAGGGGGGAAGGGTGATATCAGAAAGGG--GCTGGCAG .....x.::..xx.x.....:.....:x..........:...x.:........x..x.....x..:......:.x..x..x.....:...........xx....x..................x........:.:x..x..:.x.:..x..xx...:::.xx...xx..:....................:.........:...x:...:.....:.....x..............x....:x...x:x.:x..x.xx.....:..x..:.....:..x..x.........:....::..::.--x..:.xx::x...x.::.....x.:x::.:x:...--......:. 303M2I35M2D8M 255/346 73.7% 348/94230402 0.0% 4/346 1.2% -4957801 -89272601 +21177 chr4 + 190214555 1024308 1024307 1024667 360 CAGAGCGGACCCGTTCCAAGCCCGTGCTCACAGGCACGCACCCCGTGAACACGACGGTGGACTTCGGGGGGACCACGTCCTTCCAGTGCAAGGTGCGCAGCGACGTGAAGCCGGTGATCCAGTGGCTGAAGCGCGTGGAGTACGGCGCCGAGGGCCGCCACAACTCCACCATCGATGTGGGCGGCCAGAAGTTTGTGGTGCTGCCCACGGGTGACGTGTGGTCGCGGCCCGACGGCTCCTACCTCAATAAGCTGCTCATCACCCGTGCCCGCCAGGACGATGCGGGCATGTACATCTGCCTTGGCGCCAACACCATGGGCTACAGCTTCCGCAGCGCCTTCCTCACCGTGCTGCCAGGTG chr4 - 94230402 5985225 5985224 5985584 88244819 88244818 88245178 360 CAGAGAGAACGAGATCCAAGCCCATCCTGACAGGGACACACCCTGTCAACACAACGGTAGACTACGGCGGAACCACATCCTTCCAGTGCAAAGTCCGCAGTGATGTCAAACCTGTCATCCAGTGGCTGAAGCGAGTGGAGTATGGCACAGAGAGCAAGTACAACTCCACCATTGACGTCGGGGGACAGAAGTTTGTTGTGCTACCCACGGGGGAGGTCTGGTCCCGTCCTGATGGCTCCTACCTGAACAAACTGATGATTACTCGAGCCAAGGAAGAGGATGCAGGGATGTACATTTGCTTAGGGGCAAACACCATGGGCTACAGTTTTCGCAGTGCTTTTCTCACAGTCCTGCCAGGTG .....x.:..xx.x.........:.x..x.....x..:.....:..x.....:.....:....x...x..:.....:..............:..x.....:..:..x..:..x..x.................x........:...:.x...:..x:x:.............:..:..x..x..x...........x.....:........x..x..x.....x..x..:..:...........x..:..:...x.x..:..:..x...x:xx.:..x.....:..x........:...:.x..x..x.................:..:.....:..:..:.....x..x.......... 360M 283/360 78.6% 360/94230402 0.0% 0/360 0.0% -4960917 -89269485 +13093 chr4 + 190214555 1024872 1024871 1025351 480 CCCTCCCTACCTCCTTTCCTCTCGCTCT-TGCAGACCCAAAACCGCCAGGGCCACCTGTGGCCTCCTCGTCCTCGGCCACTAGCCTGCCGTGGCCCGTGGTCATCGGCATCCCAGCCGGCGCTGTCTTCATCCTGGGCACCCTGCTCCTGTGGCTTTGCCAGGCCCAGAAGAAGCCGTGCACCCCCGCGCCTGCCCCTCCCCTGCCTGGGCACCGCCCGCCGGGGACGGCCCGCG---ACCGCAGCGGAGACAAGGACCTTCCCTCGTTGGCCGCCCTCAGCGCTGGCCCTGGTGTGGGGCTGTGTGAGGAGCATGGGTCTCCGGCAGCCCCCCAGCACTTACTGGGCCCAGGCCCAG---TTGCT--GGCC-------CTAAGTTGTACCCCAAACTCTACACAGACATCCACACACACACACACACACACTCTCACACACACTCACACGTGGAGGGCAAGGTC------CACCAGCACATCCACTATCAGTGCTAGACGG chr4 - 94230402 5999579 5999578 6000025 88230378 88230377 88230824 447 CTCTTTCTGTCTC-TTCCCTGCCACGATGTACAGATCCCAAGCCTCCGAGTGCACCTGTGCCCCCCTC---CTCAGTCAGCAGCCTTCCCTGGCCCGTGATCATCGGCATCCCTGCCGGAGCGGTCTTCATCTTTGGGACAATCCTCCTGTGGCTTTGCCAGACCAAGAAGAAACCTTGCTCCCCACCAGCTGCTGCCCCTGTGCACCGGCCGCAGCCCCGGGACAGGATCTGTGTTTCCCAGGTCCCAGACAAAGACTGCATCT------CCTCCATAAAC---------------------TATGAGGAATACGTCGC-CCAGCAG-----CAGCATTTACTGTCCCAAGGGCCCGCGCTTGCTCCGGCCATGGCATCCAAAATGTACCCAAAGATTTACACGGACATCCATA------------------CCCACACCCACTCACATGTGGAAGGCAAAGTCCACCAGCACCAGCACATTCAGTACCAGTGCTAAGAGG .:..::..::...-..:...x:.:.xx.-.:....:..x..:..x..::.xx........x..:....---...:.:..x:.....x..x.........:.............x.....x..x.........:.x..x..xx.x..................:..x.......:..x...x....xx.:x....:x.:..:x...x:x...xx.:x..x.x..:x.x.::.:.:.---x..:x:x.xx......:...:x:x:..------..x..x.x.:.---------------------.:......::.:.xxx.-..:....-----.....:......xx..x...x..x.---.....--....-------.:..:x.......x..:x.:.....:........:.------------------.:.....x........:.....:.....:...------...........:..x..:........::x.. 13M1D14M1I39M3D164M3I27M6D11M21D17M1D7M5D25M3I5M2I4M7I36M18D32M6I31M 306/425 72.0% 447/94230402 0.0% 77/425 18.1% -4974707 -89255695 +13129 chr4 + 190214555 1024879 1024878 1025351 473 TACCTCCTTTCCTCTCGCTCTTGC----------AGACCCAAAACCGCCAGGGCCACCTGTGGCCTCCTCGTCCTCGGCCACTAGCCTGCCGTGGCCCGTGGTCATCGGCATCCCAGCCGGCGCTGTCTTCATCCTGGGCACCCTGCTCCTGTGGCTTTGCCAGGCCCAGAAGAAGCCGTGCACCCCCGCGCCTGCCCCTCCCCTGCCTGGGCACCGCCCGCCGGGGACGGCCCGCG---ACCGCAGCGGAGACAAGGACCTTCCCTCGTTGGCCGCCCTCAGCGCTGGCCCTGGTGTGGGGCTGTGTGAGGAGCATGGGTCTCCGGCAGCCCCCCAGCACTTACTGGGCCCAGGCCCAG---TTGCT--GGCC-------CTAAGTTGTACCCCAAACTCTACACAGACATCCACACACACACACACACACACTCTCACACACACTCACACGTGGAGGGCAAGGTC------CACCAGCACATCCACTATCAGTGCTAGACGG chr4 - 94230402 5988391 5988390 5988840 88241563 88241562 88242012 450 TAACTCTTTCTGTCTCTTCCCTGCCACGATGTCCAGATCCCAAGCCTCCGAGTGCACCTGTGCCCCCCTC---CTCAGTCAGCAGCCTTCCCTGGCCCGTGATCATCGGCATCCCTGCCGGAGCCGTCTTCATCTTTGGGACAATCCTCCTGTGGCTTTGCCAGACCAAGAAGAAACCTTGCTCCCCACCAGCTGCTGCCCCCGTACACCGGCCGCAGCCCCGGGACAGGATCTGTGTTTCCCAGGTCCCAGACAAAGACTGCATCT------CCTCCATAAAC---------------------TATGAGGAATACGTCGC-CCAGCAG-----CAGCATTTACTGTCCCAAGGGCCCGCGCTTGCTCCGGCCATGGCATCCAAAATGTACCCAAAGATTTACACGGACATCCATA------------------CCCACACCCACTCACATGTGGAAGGCAAAGTCCACCAGCACCAGCACATTCAGTACCAGTGCTAAGAGG ..x...:..::x....x::.:...----------...:..x..:..x..::.xx........x..:....---...:.:..x:.....x..x.........:.............x.....x..:.........:.x..x..xx.x..................:..x.......:..x...x....xx.:x....:x.:...x.:.x:x...xx.:x..x.x..:x.x.::.:.:.---x..:x:x.xx......:...:x:x:..------..x..x.x.:.---------------------.:......::.:.xxx.-..:....-----.....:......xx..x...x..x.---.....--....-------.:..:x.......x..:x.:.....:........:.------------------.:.....x........:.....:.....:...------...........:..x..:........::x.. 24M10I36M3D164M3I27M6D11M21D17M1D7M5D25M3I5M2I4M7I36M18D32M6I31M 303/419 72.3% 450/94230402 0.0% 85/419 20.3% -4963512 -89266890 +5644 chr4 + 190214555 1026810 1026809 1026921 112 AGATCTCTGTAATTTTATGTAGAGTTTGAGCTGAAGCCCCGTATATTTAATTTATTTTGTTAAACATGAAA------GTGCATCCTTTCCCTCCAGGCTGGTGTTTCTGCCCATGTCT chr4 - 94230402 6001263 6001262 6001380 88229023 88229022 88229140 118 AAACCTTTGTAATTCTATATAGAGTTTAAACAGAAGTCATGTATATTTAATTTATTTTGTTAAACAAGAAAAAAAATGTATGATATTTTCCTCAAAACTGGCATTTCTATGCATATTT .:.:..:.......:...:........:.:.x....:.x:..........................x....------..:::x:x...:....x.::....::.....::x...:.:. 71M6I41M 83/112 74.1% 118/94230402 0.0% 6/112 5.4% -4974453 -89255949 +5644 chr4 + 190214555 1026810 1026809 1026921 112 AGATCTCTGTAATTTTATGTAGAGTTTGAGCTGAAGCCCCGTATATTTAATTTATTTTGTTAAACATGAAA------GTGCATCCTTTCCCTCCAGGCTGGTGTTTCTGCCCATGTCT chr4 - 94230402 5990080 5990079 5990197 88240206 88240205 88240323 118 AAACCTTTGTAATTCTATATAGAGTTTAAACAGAAGTCATGTATATTTAATTTATTTTGTTAAACAAGAAAAAAAATGTATGATATTTTCCTCAAAACTGGCATTTCTATGCATATTT .:.:..:.......:...:........:.:.x....:.x:..........................x....------..:::x:x...:....x.::....::.....::x...:.:. 71M6I41M 83/112 74.1% 118/94230402 0.0% 6/112 5.4% -4963270 -89267132 +3708 chr4 + 190214555 1036033 1036032 1036196 164 AGCTCCATCCCCA----GCTGCTCCCCCAGCCTGTGAC--CCAGCCTCCCACCCCAGGAGGCTCTGGCACCCCTCCCTCCACCCCACACCCTCCCGGCCCTCCCTTTCCCTGCCCCGGCCCTCACTCCTCCTCCACCCTCCCCGCCCCTCCGCTACCATGCCCCAGCCGT chr4 - 94230402 5300967 5300966 5301130 88929273 88929272 88929436 164 AACTACATCACCACGGTGCTGC-ACTTCAGCTCGGGACAACCTGCCTTCT-TCCCAGG----TCAGACACTGCTTCACCCACCTCGCTCACACCCAGCCCTGCCCATGCCTTCTCAATCCAGCCCATCGCCCACACTCTCCCCATGGCCCTGCTTCTTTGCCCAAGCCGT .:..x....x...----.....-x.::....::.x...--..x....:.:-:......----..x.:...:x..:.x:.....:.:.x.x.x...:.....x..:x.x...x.:.x:x..xx.x.x:.x..:x...:......::xx.:.:...x.:x.....x...... 13M4I5M1D15M2I10M1D7M4D108M 104/158 65.8% 164/94230402 0.0% 12/158 7.6% -4264934 -89965468 +3177 chr4 + 190214555 1040893 1040892 1041058 166 TGCTCTCCTTGGAGGGCAGAGAGCATTCTTCAGAGTGGCATGGTTGCCAGACCAAATGACAAAAGTGCCCACTGGGTAGACCGGAGA----CCCCAGGCTGGCAGCCCGGCTGCACCCCCAGTTTCACAGGAGGCACTTTA--ACGCCAAAAACATCTGGAAATTGTTCCAA chr4 - 94230402 6147138 6147137 6147309 88083094 88083093 88083265 172 TGTTTTCTTCTTAGGGAACCAAGTATTCTTACAAATAAAACAAATGACATACGAAATGATAAAAGTGCCCACTGAGTAAATGAAAGATATCCTTTATTTTCAGAAACATACAGCTTTACAAGTTTAATGTGGAGTGCTGTGCTGTGCCAGATACATTTGGATACCATCCCAA ..:.:..:.:xx....x.xx:..:......xx:.:.::x.:::x..x..x..x......:..............:...:.:x::...----.:::.xx:.x:x.:x.xx:.x..x::x.x.....x.::x.::.::..x.:--::....:.x....:....x.:::.:.... 87M4I50M2I29M 94/166 56.6% 172/94230402 0.0% 6/166 3.6% -5106245 -89124157 +3749 chr4 + 190214555 1043360 1043359 1043419 60 ACATGCACACATATGCATGCATACACACATCTGCACACCAACATGCACGCGCACACACGT chr4 - 94230402 89016082 89016081 89016141 5214262 5214261 5214321 60 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGT .::.........x........:......:.:...:...xx.......x::...:...... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -87972722 -6257680 +3332 chr4 + 190214555 1079637 1079636 1079709 73 ACTTACTTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGACTCCAGTCTGTTAAACACATAGTGAAAG chr4 - 94230402 6169072 6169071 6169143 88061260 88061259 88061331 72 ACTTACTTTCCTCATTGGTGAAGGAACATGATCAACCTCCATTGACTCCATTCT-TACAACAAATGTCAAAAG .........:..x..:..x......:x:x.......:.....:.......x...-.xx....x..:x::.... 54M1D18M 54/72 75.0% 72/94230402 0.0% 1/72 1.4% -5089435 -89140967 +4161 chr4 + 190214555 1090769 1090768 1090845 77 CAATTCCACTTACCTTTTCTCTATAGAAGGCTAACAATCTCTTCCTGTGTTTTTCTTGAAATTCTAAAATCTGAAAA chr4 - 94230402 6173450 6173449 6173526 88056877 88056876 88056953 77 CAATTAGATTTACCTTTTCTCTGTGGTATGCTAGCAAATGTTTACGATTTTTTTCTTGAAATTCTGAAATCTAAAAA .....xx.:.............:.:.x.x....:...x:x:..x.x:.x................:......:.... 77M 59/77 76.6% 77/94230402 0.0% 0/77 0.0% -5082681 -89147721 +3019 chr4 + 190214555 1100376 1100375 1100432 57 ATTTCCACAGGCATTTTCCATAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGG chr4 - 94230402 76282827 76282826 76282883 17947520 17947519 17947576 57 ATTTGCACAGAAGTTTTAACTAATTTGTTTTTTGTTTTTTGTTTTTTTTTAAGAGGG ....x.....:x:....xxx......x......x......x.........:...x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -75182451 -19047951 +5197 chr4 + 190214555 1108334 1108333 1108425 92 TCAACTTACATGCTTTGAAAGCAAAACTGTACGACAAGGAGCTTTACAAATCAAGCATTCATTCTTTTTACCTATAAAATAAAAATAGGCTT chr4 - 94230402 6180096 6180095 6180187 88050216 88050215 88050307 92 TCCATTTACCTCTTTTGAAAGGAATACTGTACGACAAGGAGTTCTGCAGATCAAACATTCATCTTTTTTGCCTGCAAGGTAAAGACACACTT ..x.:....x.x:........x..x................:.:.:..:.....:.......::.....:...::..::....:.:.x:... 92M 69/92 75.0% 92/94230402 0.0% 0/92 0.0% -5071762 -89158640 +3387 chr4 + 190214555 1109083 1109082 1109154 72 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCATGCCTCAGGCTCCCAAGTGACTGGGCGTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.............x...x..x.x.....x..::.....::....:xx....x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -17088043 -77142359 +9297 chr4 + 190214555 1115260 1115259 1115425 166 TTAAACAATCTTCTTAGCTATAAAGAAGTCTTTCAGGTACTTCATTTGGAAAATTCCGACTGAGATAAAGATTAATATTTGTGCAAAAGCCCACCATAAAACATTGCTATTTGTATCTTCACTGGTCGTTCGAAAATTTTCTTCACGGTCCTATGCGGAAAAGAAG chr4 - 94230402 6185629 6185628 6185792 88044611 88044610 88044774 164 TTAAACAAGCTTCTTAGCTATAAAGAAATCTCTGAGAGATTTAATCTGCCAGATTCCAATGGAGACAAGGATTAACGTTTGTACAACAGCCCACCACAAAATATTGCTGTTAGTTTGTTCACTTGTCTTCCGAAATTTTTCTTCACGTTCC--TGAGGAAAAAAAG ........x..................:...:.x..:x.:..x..:..xx.:.....:.:x....:..:......::.....:...x.........:....:......:..x..x.x......x...x.:.....x...........x...--..x......:... 151M2D13M 130/164 79.3% 164/94230402 0.0% 2/164 1.2% -5070369 -89160033 +9419 chr4 + 190214555 1115260 1115259 1115425 166 TTAAACAATCTTCTTAGCTATAAAGAAGTCTTTCAGGTACTTCATTTGGAAAATTCCGACTGAGATAAAGATTAATATTTGTGCAAAAGCCCACCATAAAACATTGCTATTTGTATCTTCACTGGTCGTTCGAAAATTTTCTTCACGGTCCTATGCGGAAAAGAAG chr4 - 94230402 6184184 6184183 6184347 88046056 88046055 88046219 164 TTAAACAAGCTTCTTAGCTATAAAGAAATCTCTGAGAGATTTAATCTGCCAGATTCCAATGGAGACAAGGATTAATGTTTGTACAACAGCCCACCACAAAATATTGCTGTTAGTTTGTTCACTTGTCTTCCGAAATTTTTCTTCACGTTCC--TGAGGAAAAAAAG ........x..................:...:.x..:x.:..x..:..xx.:.....:.:x....:..:.......:.....:...x.........:....:......:..x..x.x......x...x.:.....x...........x...--..x......:... 151M2D13M 131/164 79.9% 164/94230402 0.0% 2/164 1.2% -5068924 -89161478 +7463 chr4 + 190214555 1116255 1116254 1116434 180 CAGACTGACCCTTTGATAGTTTTGTTCTTTGACTATTTGCTCAATTTGTTCAATTAGATGTTCAAGCTTGAAGGTAAGTTCATTAACTTTGTCCTTTGCTTGAGCAATGGCCGCATCAAGGTCGTGTTCTCCAACTCGAATATCTAAGTGGATCCGCTGTACAAACAGTAAAAAGGAAAA chr4 - 94230402 6185213 6185212 6185390 88045013 88045012 88045190 178 CATACATACTCTTTCGTAGTTTTGTTCTTTGGAAATGTGATGAATTTGCTCAAGAAGATGTTCTACTCTAACATTAACTTCATTCACTTTGTCTTTGGCTTGAACAAGGGCTTCATCCAGAAAATGTTCTCCAATTCTAATGTTCAAAGGGATACGCTG--AGAACAACAACAAAAAAAA ..x..xx..:....x:...............:xx..x..x.x......:....xx........x.x::.:.x:x...x......x........:..x......:...x...:x....x..:xx:..........:..x...:.::..:x....x.....--x:....::..x..::.... 159M2D19M 127/178 71.3% 178/94230402 0.0% 2/178 1.1% -5068958 -89161444 +8053 chr4 + 190214555 1116255 1116254 1116436 182 CAGACTGACCCTTTGATAGTTTTGTTCTTTGACTATTTGCTCAATTTGTTCAATTAGATGTTCAAGCTTGAAGGTAAGTTCATTAACTTTGTCCTTTGCTTGAGCAATGGCCGCATCAAGGTCGTGTTCTCCAACTCGAATATCTAAGTGGATCCGCTGTACAAACAGTAAAAAGGAAAAAA chr4 - 94230402 6186655 6186654 6186834 88043569 88043568 88043748 180 CATACATACTCTTTCATAGTTCTGTTCTTTGGATATGTGATGAATTTGCTCAAGAAGATGTTCTACTCTAACATTAACTTCATTCACTTTGTCTTTGGCTTGAACAACAGCTTCATCCAGAAAATGTTCTCCAATTCTAATGTCCAAATGGATACGCTG--AGAACAACAACAACAAAAAAA ..x..xx..:....x......:.........:x...x..x.x......:....xx........x.x::.:.x:x...x......x........:..x......:...::..:x....x..:xx:..........:..x...:..:..:.....x.....--x:....::..x..x:...... 159M2D21M 131/180 72.8% 180/94230402 0.0% 2/180 1.1% -5070400 -89160002 +6137 chr4 + 190214555 1123104 1123103 1123229 126 AAAGAATGTTTTACCTCATCATTGTAAGTTGTAATAGTCACAAACATTCCCAAACCAGGAGCAGATTCAAGGAACGTATGTCTGCCTATGTCCCATTGCTGTATCTTGAAAGTCCCTGTTTCAAAA chr4 - 94230402 6188339 6188338 6188463 88041940 88041939 88042064 125 AAAGAATATTT-ACCTCAGTAGTAGGAGTTGTAACAGTCACAAACATTCCTAAACCAGGAGCAGAGTCCAGAAAGCCTTGTTTATGCATATCCCACTTCTGTACTTTGTAATTCCCTGAATAAAAA .......:...-......x:.x.:x:........:...............:..............x..x..:..xx:x...:.::x:..:.....:.x.....::...x..x......xx.x.... 11M1D114M 94/125 75.2% 125/94230402 0.0% 1/125 0.8% -5065235 -89165167 +3192 chr4 + 190214555 1136541 1136540 1136589 49 TTTTTCTTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTAGACAGAGTC chr4 - 94230402 71609806 71609805 71609854 22620549 22620548 22620597 49 TTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTTAGACAATATC .....x......:..................x..:x........:x:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -70473265 -23757137 +7772 chr4 + 190214555 1167470 1167469 1167656 187 TCTTAGACGCAGTTATCAGGGACGCACTCAGCCTCTTCTTCGAGCTCGGGGCAGGGGCTCCCGTTGTTGGCGGGCTGGACCCGGACGTAGCGAGTCCTGCTCTTGGTCCCGAGCCTCCCACAGTGGCCTCCGCACAGTCCCCAGGACGACCACAGGGAGACCTCGCAGTCCAGCGGCGTTTCTGGAA chr4 - 94230402 6195276 6195275 6195462 88034941 88034940 88035127 187 TTTCAGACACAATTATCTGGTTCACATTCTGTTTCTTCTTCCAGACTTGGACAAGGCGTTCCATCATTAGCAGGGTGAAGAACTACAAAACGAGTTCTGATCTTGGTCCCCATTTTTCTGCAAGGACCTCTGCAGAGACCCCAGGAAGACCATTGTGAAACTTCACAGTCCAGTGGTGTTTCTGCAA .:.:....:..:.....x..xx.:..:..x.::........x..x::x..:..:..xx.:..:.::..:..:..x..:.xxxxx..:x.:.....:...x..........x.x::.:.::..:x.:....:...x..x........x.....:x.x..:..:..:........:..:.......x.. 187M 125/187 66.8% 187/94230402 0.0% 0/187 0.0% -5027806 -89202596 +13296 chr4 + 190214555 1170992 1170991 1172076 1085 CACTCACCTCGGTCACCGTGTCCTGCGGGATGGTGGCGAAGTTGGGGGAGGAGAAGGTGAAGCCGCTGTCCGTCCCGGCGTCGTAGGGGTACAGGTCCAGCGCCGCCTGTTCCCGCCAACGGTCCCCGTCGCACAGGTCCAGGCTGTCCACGCCCACGAACCAGTCGGGGCTGGGCACGATGCGCACCACAAACGAGACC----------------------------TGCGGCGACA-------------------------------------GCGGCTCAGC---------------GCGCCTG---GCCCCGGCCCCCCGGACCCCGCCCCCGGC-------------------------------------------------------------------------------------------------------------------------CGGCCCCG--------------------------CGCTCACCAGCGAGTGCCTGCGCTGCACCTCCAGCTCCGCCGACGTCTGCCCGGTGCCGCTGGGGACGGCGGGCGCCGAAAACACCGCGTGCACGCTCTGCAGCGCCTCCCCCGCCGCCTCGATCTCCTTCATCAGCGCCCAGGCCTCGCCGCGCTCCGCAAAGTCGCGCAGCCCGTTACTGACGTACTGGTTCTTCCTCCACATGCTGTAGTCGGAGCTATGCGCGGCCCCTGCAGGACCACCCGGCCGCGCCGCGGAC-CATGGTCAGACACTGCGGTCGGGCTTGGATTCCAGGGGGCGCCCCAGGAAATCCCTCCCCGCCGCCCG--CAGGGAACCATGGCCCCCAGTCACGTCGGACCGTGACACCCTGTGGCTGCCCCTGCCGCGACCCACCTGCGCCCTCCCCGTGAGCGCCCCCTGCCCCCACCGCATCCCCGGAACCGCACACCGCAGGCGCTCG-------------------GCAAACATTCTG-GTGTTAGAGTCTC-----------CCGACGTCAG------------------CACGCCCCAGACTGGGAAGCGCCGCCGTGCAGCTGTGCGGGGGGCTCCGGCGCCGCAGCCCTCCTGGTGGAGCAGGAGGC-------------GAGGAGGGGGCTGTACTTACCCAGCAGCGAAGACCACTGCGCAGGGGGGCGGAACAGGGGGTACTGCTTGGGGAAGGCCGTCTGGCTCCACTTGCCCGTGAAGGTGATGCTGTATTTGGCCAGGGCTCTGGCGGAACAGATGGACTCTCCCCCAAGAGGCTGGCCGGCGGC---GCCGAGAGTGGCCAGGAGGAGAGCGCAGAGGGCCTTGCCCAGGGCGGCGGCCGGGC-TGGGGTTTTCCATCACCT chr4 - 94230402 6199343 6199342 6200655 88029748 88029747 88031060 1313 CACCTACCTCTGTAACTGTGTCTTGTGGAATAGTGGCAAAGTTTGGGGAGGAAAATGTGAAGCCACTGTCGGTTCCAGCATCATATGGATATAGATCTACTGATATTTTTTCCATCCAGTGGTCCCCTTCACAGAGGTTTAGGCTGTCAATACCCACAAACCAGTCGGGACTTGGCACAATTTGTACAACAAATGAAACCTAATGAAATAAAACAACCCAGCATTACTTATGGCAATACTTATTTTGAAATTCTCCAGTACTAGTTATTGTAACTGTAGCTTAACTCGTGAAATAAATGGGCTTCTATATGCTTTTGCTTTATAGAACCTGCTAAGAGCTCATCGAAATTTGACATGTGTTTTTTTTTAAGTAACATTTTTCATTATCATATTTCTACCAATGAGAGCTCAAATATTTCACTTTGTGTGCTAGTGACATGGAAAAAAAAAAAAAAAAAAACAACCCCAAAACTTTAAAGGTTAGCATGTACATTTACTTACTAATGGATGTCTTGAATGCACTTGTAATTCAGTGGAGGTTTGTCCTGTGCCACTGGAAATGGCAGGAGCAGAGAAGATTCCATGCACACTCTGAATTTTCTCTCCAGCTTCTTCTATTTCTTTCATTAATACCCATGCCTCACCCTTTTCAGCAAAATCACGTACACCATTGCTGGCATATTCATTTTTTTTCCACATGCTGTAGTCAGAACTATGAGTAACACCTATTTAA---------------GTGAATACATTGCATGACAGAAAAGTCTGGTTTAGATTGTCCATATTTCTTCAGATGCTCTCTTCTATTTCTAAGGTTAAAAAAAAATTGTGTCTAACCATGAGCGAACACTAAAACATTTGAC---------------------------------TTATCACTGTTTATTTCAGCTGTAGCC----AATTGAAAACAGAAGTCAATTGAAAACAGTTGTAGATTTTTGAAAGCATTGTGAATACTTCAATTTCTGCATTTTATTCTAACTTCAGTTATTTTCCTTCTTTTTACATTAGTTATATTAAAA--------CCTACTATTGAGGGGGGGAAAAAAAGATCACAGT----------GATCAAGAGATTTATCTGGTCTTAAAACTGCATTTTTCACTTACCTAGCATTGATGACCACTGTGCTGGGGGCCTATAAAGCGGATACTGTTTGGGGAAGGCAGTCTGACTCCATTTCCCTGTGAAGATTATACTGTACTTTGCAAGTTCCTCTGCTGTGCAAATAGAGTCATCACCCAGAGGCAAGCTGCTGGCATAGCCTAGAATTGTTACAAGCAGCGTCCAGATAACTTTG-CAGGAGCAGTAGACAAACATCAGGTTTTCCATTCCCT ...::.....x..x..:.....:..:..:..:.....:.....x........:..x........:.....x..:..:..:..:..x..:..:..:..:.x:.x::::.x....xx...::.......x..:..x....::........x.::.....:...........:..x.....:..x:.:..x.....:..:...----------------------------.::...:.:.-------------------------------------.::...:.:.---------------..x:..:---..:::x..:::x::..x..:..:xxx:..-------------------------------------------------------------------------------------------------------------------------.::....:--------------------------::..:..:.::.::..:..xx:x.....:.x:.::..x.:x..x..:..:..x.....:....::.:...:..x..x..:..x.::x.:.....:.....x.x:x:...:..x..:x.:..x..:..:.....:.:::....x.....:..x:x:..x.....:..:..:.xx..:..:...:.:..:.x:..:..::................:..:.....x.:::.x...::xx:.---------------.:.:.:-...x.:xx....xx:x:...x..:..:....x:xx:x:x:x.::...:x:x..:..:.:xx::x:xx.--:.:::..xx..x.:x:.:.::..:.xxx..x.::x.x.x.x.x..:.---------------------------------.x.x.:.:x::.::::.x:.:.:.x..----..::.x.x..x.x..x.:x.:.-------------------.x..:....x..-:.::.xx.:.:..-----------.::..x....------------------..:xxx::.x.:.:::.--------.x.:.x::..x.x.....:xxxx::x::.:...:----------..x..:...::-------------:.:xx.x:xx:.x:.......:....x:..x........:..x.....x.x:x.x..x..:.....:...........x.....:.....:..x..:......:.x..:.....:..x..x..xx.:::x..x.x:..:..:..x..x:.x..x......x:..:.x:...---...x...:.x.::.x:..x..x.:x....x::.:...-.x:.:..:.::.x.:::.-.x:..........:x... 200M28I10M37I10M15I7M3I29M121I8M26I239M15D6M1I68M2I47M33D27M4D22M19I12M1I13M11I10M18I17M8D34M10D11M13I171M3I37M1D18M1I18M 612/1014 60.4% 1313/94230402 0.0% 370/1014 36.5% -5028351 -89202051 +5125 chr4 + 190214555 1172823 1172822 1172989 167 CGCACCCCTTTCTTT-GTCTGTCTGT--------CCTATCCCTCCCCTCCCCTCCCTGTCCCCTCCCTTCCCCTCCCCTCCCCTCC----------------TCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCCCCTGTCCTCCTCCCTCTCCCCGTTTCTCTCCCGTTCCAACAAGCGCCTTCCTGG chr4 - 94230402 11552233 11552232 11552423 82677980 82677979 82678170 191 CGCTCTCCTTTCTCCCGGCTCTCTGTAGTCCCCTCGTGTCCGTCCGCTCCCTTCTCTGTCCCCTTCGTTTCTCCTCGCACTCCTCCCCACTGCTGCGGTTCATCCTCTCTCCTCCACCGCTCCCCGTCTCCTCTCCCGGCTGCCCCCGACTGACGCTGCCTTTC-CTCCTCTTCCAGTTGGCGCCCCCCCAG ...x.:.......::-.x..x.....--------.x.:...x...x.....:..:.........:.x..:.:.::.x.x.:.....----------------...:...:.....x..x......x:....:.....xx...:..:.xx.:xx.x.:x.x....-....:x.....::x:.....::..::. 15M1I10M8I52M16I62M1D27M 115/166 69.3% 191/94230402 0.0% 26/166 15.7% -10379410 -83850992 +3080 chr4 + 190214555 1206934 1206933 1206989 56 AGAGGCAGTGGGGGCAGGTGTGGGGCAGGTGTGGGGCAATTGGAGGTGGGTGGGGG chr4 - 94230402 92916380 92916379 92916435 1313968 1313967 1314023 56 AGACCCCGGGGGAGGGGGTGTGGGGCAGGTGTGGGGCGGGCGGAGGGGAGCGGGGG ...xx.x.x...:.x:.....................::x:.....x.:.:..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -91709446 -2520956 +39684 chr4 + 190214555 1211449 1211448 1212436 988 TCTTTCCAGGATTTTTATTTCTTTAAAATAATTCATACAAATGGTTACAGTCACAAACATGATTTTAACCAAAA-TATTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCG--GGGACGCTGCCACCCTCCA--------------------CGTCCC-----CAGGACAGACGTCGATGGG---CAGCGGGCACGCTGGGCACC---GCCCAAGCTTTTCCTTTT--------GGAGCTGCTTCGTGATGCCGTCTTCATTTGGAACAAGGGGGGGTTCATGCCAAAATTAGGAAAAACAGCCTTTGTTTTGTTTTTCTAAATTATTCTAAAAA-TAAGACAAGCAGGTAGAAAAAACAATGCACTGTGTGGCATAAAAAGAAAAACGGGAAGGATTCATTGTCCTGAGAAGTTTGCCAACTGCCTCATTCTGGGGCACGTTCCAACATACAAAAAAAAAAAAAACAAAAAAAAAAACCTCAAATTGACTT-CCAAATG-CTCCTTCAGGTTTTCTTTTTGTTGACAGCTAAGCAAACAGATCCTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAA-TAACTACTGACTTCTTCTGCTTAACGAGGAACGCGAAGGACACAG-GGCAGAG----CGCCCACAGGAC--GGAC-GACGACAAGCGACACGAGG-----------CCCAGCGCTGCCC----CCTCCCGCCTCCT----------GACAGCCCGGACCAGTCTCTGCAGTGCCAGGGCCACCACACAGATGCCTCCTCCACACACTCTGGTCCGAGGGTTT---------------CCGGGCCCTCTG--------------------CCCAGGCGCCGAGGCT----------------GGAGAGCTCCTCCCG--GGCTACAACTGGTCACTGGCGTGGTCTCTATCCGCCTCGGGCTTGACGGTTTGGCCAGGAGAAGGGGCGTGGGGCGGGTGGGCCACAGGGGGCAGGCCGTGGGACAGGGACATGGCGCTGGGGACGATACCTTCCACAGCAGCTGGGATGCCAGTGGGGGCCACGCCCACCACGCCCGGAGGGTACCTGCTGGGAGAGG chr4 - 94230402 6359496 6359495 6360587 87869816 87869815 87870907 1092 TTTGTCTGGGATTTTTATTTCTTTAAAATAATTCATACAAATGGTTACAGTCACAAACATGATTTTAACCAAAAATATTGCTAGCCTACCACATTACCAGGAAGGAATCAATGTAGGCAATGAAATGCTGCTACTTTTCAGTAGTCTAGTGCCTTTTTCGCATCCCACCAATAATATATACTTTAACTGGTGACAAAAAGCACAATGCTCATTTATACAAAACCTTTTTTTTTTTTTTCCTCAAAATCTCTTTGCAAGGTTGTCTTCATTTTGAA-ACAAGGGAATTCATGCCAAAATTAGGAGAAACGGTTTTTCTTTTGTTTA-CTAAATTATTCTAAAAAATAAGACAAGCAGGTAGAAAAAACAATGCACTGTGTGGCGTAGAAAGAAAAATGGGAAAAATTCATTGTCCTGAGAAGTTTGCCAACTGCCTCATTTTGGGGCATGTTTTAAAATATAAAAGAAAGGATTTT-------TAATCTCAAAATTGGTTTGCTGAATGCCTCCCTTACGTTTT-TCCTTGTTGACAGCTAAGCAAACAAACCCTTTTTAATGTTCTAAAAACTGTACACAGACAAGTACATTCATGATATAATTAACTACTAACTTCTCTTGCTTAACAAAGAACCCATAGGACACAGAAACAGTGAATCAGTTCACTGGACAGGGACAAACTACAATTTATACGGAGGAAAAAATGTTTCCAAATCTTCTTTTTGTCTCCCACCTTTTCCTTTTATACTGTATATTGGACCAGTTTCTAAA---CCA----------ATAATCGTCTCCTCC-----TTTAAGTTCATGGTTTTGCCTTAATCAAAATCCAGGGCTTTGTGTTTGTTTTGTTGTTTTCTTTTCCATACGCTGAAGTTGAAATCTCCGATGCTGGGAATGCTGTTTTCGTAGGCTACAATTGGTCGCTTGGGTGGTCTCTATCAGCTTCTGGTTTGACAGTTTGGCCGGGAGAAGGAGCATGGGGCGGGTGGGCTACAGCAGGGAGGCCGTGTGATAAAGACATAGGGTTGGGGACAATTCCTTCTACTGCTGTAGGTATGCCAGTCGGAGCCACACTTACAACACCTGGGGGATACCTGCTGAGAAAAG .:.x..::..................................................................-...................:.x.....x..x.::::..:....:--.::.:.....:..::.:..--------------------.:....-----:.:x.:.x..x.::.:x..---..:x::....:x..xx..::---:.xx..x.....::....--------::.:::x...:.::.x.::..........x...-.x::...::..................:....:.::...x........x-.................-......................................:..:.........:.....::....................................:.......:...::..x...:....:...::.xxx:-------x..x.::x......::..-.::....-....:.:.x.....-.::.....................:.:.....x.............................x..:......:x.x..-........:......::........:.:....x.:x.........-::...x.----x.::...x....--....-:..x....x:x.:...::.-----------:...:xx..x.::----:.....:...::.----------x::.xx::........:...:x.---...----------.:.:x:.:.......-----:.:x:..:.:x..x...---------------.x....::.x..--------------------:...x:...:..:.:.----------------...:x...x:.::..--........:.....:..x.x............x..:..x..:.....:........:........:..:..............:....x:..x........x..:.::.....:.x.:.......:..x.....:..x..x.:x..x........x..:.....:.::..x..:..:..:..:.........:..:.:. 74M1I44M2I19M20I6M5I19M3I20M3I18M8I33M1D49M1D17M1I131M7D18M1I7M1I14M1D78M1I45M1I7M4I12M2I4M1I19M11I13M4I13M10I23M3D3M10D15M5D17M15I12M20I16M16I15M2I199M 731/960 76.1% 1092/94230402 0.0% 160/960 16.7% -5148047 -89082355 +8221 chr4 + 190214555 1212889 1212888 1213053 165 TTCTGGGCCAGCGGGCCTGCTCACCTATAGGCAGCCCCATTGAGCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGGGA-GATGCAGGAGGAAGGAA chr4 - 94230402 6367112 6367111 6367276 87863127 87863126 87863291 165 TTTTATGCCTGCAG-CACACTTACCTGTATGCAGCACCATTAAGCTCTGGATGAACAACTCCGGGATCCATGCTGGCCCAATGTGTAGCTGCAGTCAAATGATCTTTGTTAACACAGTTTTTCAGACTGTCTGGAATACGACCTAGGATGAAGTAAAGGAAGAGAA ..:.:x...x..:.-.x::..:....:..x.....x.....:.....x..:..x..:..xx....:..............:..x..:..x..x....:...:..:.....:........:.....:........:..x..:...:...-..x.:.:::.:.::... 14M1D133M1I17M 121/164 73.8% 165/94230402 0.0% 2/164 1.2% -5154223 -89076179 +8221 chr4 + 190214555 1212889 1212888 1213053 165 TTCTGGGCCAGCGGGCCTGCTCACCTATAGGCAGCCCCATTGAGCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGGGA-GATGCAGGAGGAAGGAA chr4 - 94230402 6364707 6364706 6364871 87865532 87865531 87865696 165 TTTTATGCCTGCAG-CACACTTACCTGTATGCAGCACCATTAAGCTCTGGATGAACAACTCCGGGATCCATGCTGGCCCAATGTGTAGCTGCAGTCAAATGATCTTTGTTAACACAGTTTTTCAGACTGTCTGGAATACGACCTAGGATGAAGTAAAGGAAGAGAA ..:.:x...x..:.-.x::..:....:..x.....x.....:.....x..:..x..:..xx....:..............:..x..:..x..x....:...:..:.....:........:.....:........:..x..:...:...-..x.:.:::.:.::... 14M1D133M1I17M 121/164 73.8% 165/94230402 0.0% 2/164 1.2% -5151818 -89078584 +9015 chr4 + 190214555 1213476 1213475 1213607 132 ACCTGTGATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCTCGCTGTACCATGCAGCATGGGGGGTGCAGATGAGGTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCT chr4 - 94230402 6369700 6369699 6369831 87860572 87860571 87860703 132 ACCTGTGATTGCCCTTCGGATCTCTCGTGCTGCTTCCTCCCGCATCTCAATTGAGGCTTGTTCACTATACCAGGCTGCATGTGGGGTACAGATCAGGTTTGGTGCATCCTTCAAGGGGCCCTGACTAAAGCT .........x..:..x........:.....:..:.....:........:..x..x..:..:..:..:.....x..x.....x.....:.....x.....x.............::........:........ 132M 109/132 82.6% 132/94230402 0.0% 0/132 0.0% -5156224 -89074178 +9108 chr4 + 190214555 1214339 1214338 1214493 155 GCACCTGAAGGGTTCCGACTCGTGCACATCCAGGGCCGCGCCGCGGATCCGGCCCTCCTTCAGGGCCTGGGCCAGCGCCTTCTCATCCACCAGGCCACCCCGGGCTGTGTTCACCAGGAAGGCCCCTTGTCTCATCTA-GAAGACATAAGGACAGG chr4 - 94230402 6371836 6371835 6371991 87858412 87858411 87858567 156 GCACCTGAATGGTTCTGACTCATGTACATCTAAGGCTGCCCCTCGTATCCTTCCTTCCTTCAGGGCCTGTGCAAGTGCTTTTTCGTCTACTAACCCACCTCGAGCTGTGTTGACCAGGAAAGCCCCTTGTCTCATCTAGGGAAAGTTAAAAACAAG .........x.....:.....:..:.....:.:...:..x..x..x....xx..:..............x..x..:..:..:..:..:..:.:x.....:..:........x........:.................-.:.:.xx...::...:. 138M1I17M 121/155 78.1% 156/94230402 0.0% 1/155 0.6% -5157497 -89072905 +14314 chr4 + 190214555 1215989 1215988 1216222 234 ACCTGCTTGACGGTGAAGTCGTTGATGAGGTGGTGGTTGTGCTCGTTGAGGCCGCAGTGCAGGGTCACGCAGTCGCTGTGGAAGAGCAGGTCCTGCAGGGTGCTGACACGCTGCAGCCCCAGCGCCCGCTCCACGCCATCCGACAAGTAAGGGTCGTAGAAGAGCACGTTGAAGCCGAAGGCCTTGGCCCGCAGCGCCACTGCCTGCCCCACGCGACCTGGTGGCGTCAAGACA chr4 - 94230402 6375722 6375721 6375951 87854452 87854451 87854681 230 ACCTGCTTTATGGTGAAGTCATTAATAAGATGATGATTGTGTTCATTCAAGTTGCAGTGCAGGGTAACACAGTCACTGTGGAACAGCAGGTCCTGCAAAGTGCTCACCCGCTGCAGTCCCAGAGCACGCTCCATGCCATCTGAGAGGTATGGGTCATAAAAAATCACATTGAAGCCAAAGGCTTTGGCACGTAGTGCTACTGCTTGCCCAACACGCCCT----GCAACAAGACA ........x.:.........:..:..:..:..:..:.....:..:..x.:.::............x..:.....:........x.............::.....x..x........:.....x..x.......:......:..x.:...x.....:..:..:.x...:........:.....:.....x..:..:..:.....:.....x..:..x...----..:x....... 219M4D11M 183/230 79.6% 230/94230402 0.0% 4/230 1.7% -5159733 -89070669 +13227 chr4 + 190214555 1225354 1225353 1225575 222 ACGCACCAAGTCCGATGATGCCCAAGGTCTCCCCGCGGATCCTGGCAGCGCCGGACGCCACCTCGCGGATCTGCTCGACGCTCTGGACTCGTGTGCCCTCCCGCAGCGCCTGGTGCAGCCAGGTGGCCCGCCGGTACAGGTTCAGGATGTGGCACAGCGTCGAGTCGGCCGTCTCCTCCACAGACGCCGCGGGCACGTTGCAGACGGCAATGCCTGTGGGGA chr4 - 94230402 6381232 6381231 6381453 87848950 87848949 87849171 222 ACGTACCTAATCCAATAATGCCCAAGGTTTCCCCTCTGATCCTGGCAGCTCCAGAAGCCACTTCCCGAATCTGTTCAACGCTTTGTACTCTCGTGCCTTCCCGCAAGGCCTGGTGAAGCCAGGTGGTTCGTCTGTACAAGTTCAGAATGTGGCACATGGTAGAATCCGCTGTTTCTTCTACAGAGGCAGCTGGCACGTTACACACTGCAATCCCTGCAAAGA ...:...x.:...:..:...........:.....x.x............x..:..x.....:..x..:.....:..:.....:..x....x:.....:.......:x........x..........::..:.x.....:......:..........xx..x..:..x..:..:..:..:.....x..x..x........:..x..x.....x....::::.. 222M 172/222 77.5% 222/94230402 0.0% 0/222 0.0% -5155878 -89074524 +9640 chr4 + 190214555 1228169 1228168 1228348 180 GGCACAGGAGAGAACTCGGAGCCGGCCTACCTAAATCCCCGGCCGACTTGATGTCGATGTTGTCAAAACCACTGCCAATCCGGACGATGATGCGGAGGGCTTTGAACTTCTCCAGGTCCTCCCTGGTGAGAGTGATGGTGTGGTACATCAGGGCCCCCACAGCCTCGTTCAGGACCTGCA chr4 - 94230402 6385568 6385567 6385747 87844656 87844655 87844835 180 GACACAAAACAAAGTCTCTAATAGTCATACCTAAATCTCCAGCAGATTTGATGTCAATATTATCAAAACCACTGCCGATTCGGACAATTATTCGAAGTGCTTTAAATTTCTCCAGGTCTTCTCGTGTTAAAGTGATAGTGTGATACATCAGTGCACCCACTGCTTCATTTAGTACCTACA .:....::.x.:.::::xx.::x.x.x..........:..:..x..:........:..:..:..............:..:.....:..x..x..:..x.....:..:...........:..:.xx..x.:......:.....:........x..x.....x..:..:..:..x....:.. 180M 132/180 73.3% 180/94230402 0.0% 0/180 0.0% -5157399 -89073003 +3004 chr4 + 190214555 1232293 1232292 1232352 60 TTATTTTGCTATGTCATTCTTTCTTTTTTTCCTTTTTGAGACAGAGTCTTGCTCTGTTGC chr4 - 94230402 5847636 5847635 5847695 88382708 88382707 88382767 60 TTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..:.x:.x.....::x..:...:.....:............x:xx.........:x.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -4615343 -89615059 +11219 chr4 + 190214555 1238173 1238172 1238355 183 GTGGTGGTACCTTCTCATGGATCTCCTGCGTGGACTGCGCGTCGCAGAAGGCCACAGTGGCCACGTCCTTCAGGATGGGCATCTCCACTGTGCAGTCCCGGCCATCCAGCAATGCCACCAGGGGCCGCGGGTGCAGGGGCCCGTTCATGATCGGAGGTCGGACGCCTGC-AAGACAGAGGCAAG chr4 - 94230402 6400162 6400161 6400345 87830058 87830057 87830241 184 GTAATATTACCTTTTCATGAATTTCTTGTGTAGACTGAGCATCACAAAATGCCACTGTGGCTACATCCTTCAGAATAGGCATTTCTACTGTACAATCCCTGCCATCCAGCAATGCTACCAACGGGCGTGGGTGCATGGGCCCATTCATGATCGGAGGTCGAATGCCTACGAAGAAACAGAGAAG ..::.:x......:.....:..:..:..:..:.....x..:..:..:..x.....x.....:..:........:..:.....:..:.....:..:....x...............:....:x..x..:.......x......:.................:.:....:.-....x.x..:x... 169M1I14M 144/183 78.7% 184/94230402 0.0% 1/183 0.5% -5161989 -89068413 +11498 chr4 + 190214555 1241308 1241307 1241621 314 CAGGAACCCCTACCAACCTGACATCTCTTAATATGGGCTCAGCTTCCACGACCATGAATTCGACTTTTCAAAGCTTTTT---ATCTTCAGGATCCCCAGGCAGAACCGCGTCCTGTC--TCGGAGCCTCATCCCACGTCCTTAA-------------------TTGTCTCGAGCCAAAGTGCTCAGGCTTCTGATCCGCGGCAATCACTGAAGCCTGCGTCGGGGTCAAAGTCTTACT-AAAAATCAAACACAAGAGACACATTAAAATGCCATCGAAGGTCCGACCAGAACTCACAGACTCCAGGGAACGCCTCAGAAGTGGACCTCACTGCATCTGC chr4 - 94230402 6403652 6403651 6403988 87826415 87826414 87826751 337 CAGGAGCCCCTACCAACCTGACACTTCTTAATCAGAACCTGACTTCCAGGGTCATGAATTCAA--TTTCACAGCCCTTTACAATCTTCAGTATTCTGAGGCAAAATAGCACCCTCTCATTCCATTCTTATTTCCATGTCTTTAACGTTCCTTGGAGCCTCCTGTAATCTTGAACCAAAGCTTTTAAACTTCTTATCCACTGCAACCTCTGTAGCCTGGATTGTGTTCAAATTTCTACTAAAAAATTAAACACAAACAGTACATTAAAACAACGTTAAGGGTCTGACTTGCTCTCGCAGAAGCCAGGAAGCTCCATGTTAAAGCTTCTCACTGCATCTGC .....:.................::.......xx.::.::::......x.::.........:.--.....x...::...---........x..:.:x.....:..:x..::...x..--..x:xx.:.xx.:...:...:....-------------------.x:...:..:......:x:.:.::.....x....:.x....:.x...x......x:.:.x.x.....x.::....-......:........:x:::.........::x.:.::.:....:...:x.xx...:....xx.....:.:.x..x::xx.:x.xx:.............. 63M2D14M3I35M2I25M19I75M1I100M 216/312 69.2% 337/94230402 0.0% 27/312 8.7% -5162344 -89068058 +7738 chr4 + 190214555 1289786 1289785 1290304 519 TGGGCGGATACGATTGGTGCAGGGGCATCGGCCCGCCCCCATCC------TGCTCCGGCCGGCGCGTGGCGTCATTTCCCGGCGTGCAGCGCGCTCG---------CGCGTCCCCCGCCCGCTAATG------------------------TTTTGGCCGCTTCAAGATGGCGGTGCAGGAGTCGGCGGCTCAGTTGTCCATGACCCTGAAGGTCCAGGAGTACCCGACCCTCAAGGTGGGCGCCTGCGCCGCGCAGGCTGAGGGCAGCGAAGGCGTCTCCAGCCAGTGCCCTCGGGCCGCGAGGGGCCGCCCCGGGAGGGCCAGCGGCGAGGGCGGCGGGAG---CTG----GGCGCGGCCTCGCGGGGCCGTGCGGGCTTCTCAGGGGCGCCCGGT--CCGCGCCGGGCAGGTGTGGCGGGGGCGGCGGCTTTGGCCCTGCCAGGCGCCCGACTGTGGCC--------------------CCTCTGCTTGAAGAGCTGCGTGAGCCGAGCCAGCGACGACTCTGGCAGCGCTAAGGGTGGCGAATTTGGGGCTGGGGTGGAAGCCGGAGTTTGCGGGGCGTGGGG chr4 - 94230402 6635484 6635483 6636021 87594382 87594381 87594919 538 TGGGCGGGCAGGAGCG----AGCGGCGTTGGTTCGCGCCGTCTCCATGAGTGATGGGGCGGAGGAAGGCCTTTATTGCCCGGCATGCCGCGCGCGCTGTAGGTAGCTGCCTCCGCTCCGCGCTGGGGAGGGCGGGGGAGGAGGAGGGAGGCTGGTGCCCGATCCAAGATGGCGGTGCAGGAATCAGCTGCTCAGCTCTCAATGACTTTGAAGGTGCAGGAGTACCCCACTCTCAAGGTGGGTGCC--CGGCACGCAGGAGAGGGGCAG-------------AGCC---GCCCGCGTCCCGCCGGGGG----------------AGCGCTGAGGGGAGCGGAGGGCTCTGCCGTAACGGGGCTTCTCCGGCTCCCTTTCGCTTCGCGGAGTACCGCGGCGGCCGCGCCGTGT--GTGTGGAGCTCCCCGCGGCCGC-CCCCCGCCTGTCCCCCGGCTGGAGCCACCACGGCTTCTCCCCTCCTCCACTTCTCGCTGCGAGGCGAGGGACGTGCCTGGAATACATC--GCTGCGCTGCGAGCTGA------Ggggaaggggcaggccccgagcgctgcggggtggggag .......::.x..x:.----..x...:.:..::...x..xx::.------..x.xx...x.:x.x:x.x.x.:...x......:...x......x.x---------:..x...x.:x.x....::x.------------------------.xx..x...x.:..................:..:..x......:.x..x.....::.......x...........x..:...........:...--..x.:......xx::......-------------....---....x..xx....x:....----------------....x:.....x:....::.---...----::..x...:..x.x..x:.x:x:xx.....x.:.:.xxx.x...:--........x.:--......x.xxxx.x.....:x:-x...:...x.x.x....:...x:...--------------------..x..x..:.xx.x.xx...x.:.x..x...x.x:.::xx..--..x.....:x.:.:x.x------....xx....::.:xx...::xx:.......:.x..:. 16M4D24M6I47M9I21M24I94M2D21M13D4M3D19M16D20M3I3M4I45M2I11M2D22M1D26M20I42M2D17M6D38M 313/470 66.6% 538/94230402 0.0% 117/470 24.9% -5345698 -88884704 +11655 chr4 + 190214555 1311968 1311967 1312167 200 TTCCTCTCCAGGTGCCCTACGAGACGCTGAACAAACGCTTTCGCGCCGCTCAGAAGAACATTGACCGGGAGACCAGCCACGTCACCATGGTGGTGGCCGAGCTGGAGAAGACGTTGAGCGGCTGCCCCGCCGTGGACTCCGTGGTCAGCCTGCTGGACGGCGTGGTGGAGAAGCTCAGCGTCCTCAAGAGGAAGGTTGGT chr4 - 94230402 6653891 6653890 6654090 87576313 87576312 87576512 200 TTCTCATTCAGGTGCCATATGAAACACTGAACAAACGGTTTCGAGCTGCGCAGAAAAACATTGATCGAGAGACAAGTCACGTTACAATGGTCGTGGCAGAGCTGGAGAAGACGCTGAGCAGTTGTCCTGCTGTGGATTCAGTTGTTAGTCTCCTAGATGGAGTAGTTGAAAAACTCAGCGTGCTGAAACGAAAGGTAAGT ...::x.:........x..:..:..:...........x.....x..:..x.....:........:..:.....x..:.....:..x.....x.....x...............:.....:.:..:..:..:.....:..x..x..:..:..x..:..:..x..:..x..:..:........x..x..:x.:.....x:.. 200M 153/200 76.5% 200/94230402 0.0% 0/200 0.0% -5341923 -88888479 +11655 chr4 + 190214555 1311968 1311967 1312167 200 TTCCTCTCCAGGTGCCCTACGAGACGCTGAACAAACGCTTTCGCGCCGCTCAGAAGAACATTGACCGGGAGACCAGCCACGTCACCATGGTGGTGGCCGAGCTGGAGAAGACGTTGAGCGGCTGCCCCGCCGTGGACTCCGTGGTCAGCCTGCTGGACGGCGTGGTGGAGAAGCTCAGCGTCCTCAAGAGGAAGGTTGGT chr4 - 94230402 6650899 6650898 6651098 87579305 87579304 87579504 200 TTCTCATTCAGGTGCCATATGAAACACTGAACAAACGGTTTCGAGCTGCGCAGAAAAACATTGATCGAGAGACAAGTCACGTTACAATGGTCGTGGCAGAGCTGGAGAAGACGCTGAGCAGTTGTCCTGCTGTGGATTCAGTTGTTAGTCTCCTAGATGGAGTAGTTGAAAAACTCAGCGTGCTGAAACGAAAGGTAAGT ...::x.:........x..:..:..:...........x.....x..:..x.....:........:..:.....x..:.....:..x.....x.....x...............:.....:.:..:..:..:.....:..x..x..:..:..x..:..:..x..:..x..:..:........x..x..:x.:.....x:.. 200M 153/200 76.5% 200/94230402 0.0% 0/200 0.0% -5338931 -88891471 +8356 chr4 + 190214555 1322343 1322342 1322505 163 CAGCACATTCTGATCAGGTGCTGCTTCCTTCCTCT---------AAGGACCTAGTGAATATTGAGATGTTCCTGACGGCCAAAGAGGTGGAGGAGTCCCTGGAGAGGCGTGAGACGGCCACCTGCCTGGCCTGGTGCCATGACAACAAGTCCCGGCTCCGGAAGATGAAGGT chr4 - 94230402 6662782 6662781 6662953 87567450 87567449 87567621 172 CAGTATGATTTAACAAGCTGTGCTTTCCTTTTTCTTTGCTTTTAAAGGACTTAGTAAATATTGAGATGTTTTTGACTGCTAAAGAAGTGGAAGAGTCATTGGAAAGACAAGAGACTATGACTTGCTTGGCTTGGTGTCATGATAACAAATCCAGGCTCAGAAAAATGAAGGT ...:.::x.:.:.:x..x..:xx:......::...---------......:....:..............::....x..:.....:.....:.....x:....:..:.:x.....x::x..:...:....:.....:.....:.....:...x.....x.:..:........ 35M9I128M 120/163 73.6% 172/94230402 0.0% 9/163 5.5% -5340439 -88889963 +8412 chr4 + 190214555 1327591 1327590 1327706 116 GTGCTGTCTAAGCCCTCGTCTTGTCTTTGCCCTCAGAGCTGCCTGGAGTTCAGCCTCAGAATCCAGGAGTTCATTGAACTCATCCGGCAGAATAAGAGACTGGACGCTGTGAGGTA chr4 - 94230402 6668835 6668834 6668950 87561453 87561452 87561568 116 GCACCATCTAAGACCCTGTCTTGTCTTTAATCTCAGAGCTGTCTGGAATTCAGCCTAAGGATTCAGGAGTTCATTGAACTCATTCGACAGAACAAGAGACTGGATGCTGTGAGGTA .::.::......x..::...........:x:..........:.....:........x..:..:....................:..:.....:...........:........... 116M 97/116 83.6% 116/94230402 0.0% 0/116 0.0% -5341244 -88889158 +8412 chr4 + 190214555 1327591 1327590 1327706 116 GTGCTGTCTAAGCCCTCGTCTTGTCTTTGCCCTCAGAGCTGCCTGGAGTTCAGCCTCAGAATCCAGGAGTTCATTGAACTCATCCGGCAGAATAAGAGACTGGACGCTGTGAGGTA chr4 - 94230402 6665443 6665442 6665558 87564845 87564844 87564960 116 GCACCATCTAAGACCCTGTCTTGTCTTTAATCTCAGAGCTGTCTGGAATTCAGCCTAAGGATTCAGGAGTTCATTGAACTCATTCGACAGAACAAGAGACTGGATGCTGTGAGGTA .::.::......x..::...........:x:..........:.....:........x..:..:....................:..:.....:...........:........... 116M 97/116 83.6% 116/94230402 0.0% 0/116 0.0% -5337852 -88892550 +7796 chr4 + 190214555 1332737 1332736 1332870 134 GCCAAAATGTTGTTTTTTAGACATGCAAGAAAGCACTTCAGCCAAGCAGAAGGGAGCCAGCTGGACGAGGTGCGCCAGGCCATGGGCATGCTGGCCTTCCCGCCCGACACGCACATCTCCCCGTACAAGGTAGG chr4 - 94230402 6675460 6675459 6675593 87554810 87554809 87554943 134 GTCTAAATTGTCTATTTCAGACATGCAAGGAAGCACTTCAGTCAGGCTGAGGGAAGCCAGCTGGATGAGGTTCGACAAGTGATGGGGATGTTGGCTTTTCCTTCAGACACTCATATCTCCCCCTATAAGGTAGG .:.x....xx.x.x...:...........:...........:..:..x..:..:...........:.....x..x..:.:x.....x...:....:..:..x:.x.....x..:........x..:........ 134M 104/134 77.6% 134/94230402 0.0% 0/134 0.0% -5342723 -88887679 +9194 chr4 + 190214555 1336858 1336857 1337001 144 CAGGACCTTCTGGACCCTGCACGGTGGCGGATGCTGATCCAGCAGTTCCGGTACGACAACTACCGACTACACCAGCTGGGAAACAATTCTGTGTTCACCCTCACCCTGCAGGCTGGCCTCTCAGCCATCAAGACACCGTATCCT chr4 - 94230402 6681880 6681879 6682023 87548380 87548379 87548523 144 CAGGATCTCTTGGACCCCGCTCGATGGAGAATGCTGATACAGCAGTTTAGATATGATAACTACAGACTACATCAGCTGGGAAACAATTCTGTTTTTACTATAACACTCCAGGCAGGCCTTTCAGCTATAAAAACACCGTATCCT .....:..::.......:..x..:...x.:........x........:x.:..:..:......x.......:....................x..:..:x.x..x..x.....x.....:.....:..x..:............ 144M 116/144 80.6% 144/94230402 0.0% 0/144 0.0% -5345022 -88885380 +9194 chr4 + 190214555 1336858 1336857 1337001 144 CAGGACCTTCTGGACCCTGCACGGTGGCGGATGCTGATCCAGCAGTTCCGGTACGACAACTACCGACTACACCAGCTGGGAAACAATTCTGTGTTCACCCTCACCCTGCAGGCTGGCCTCTCAGCCATCAAGACACCGTATCCT chr4 - 94230402 6677333 6677332 6677476 87552927 87552926 87553070 144 CAGGATCTCTTGGACCCCGCTCGATGGAGAATGCTGATACAGCAGTTTAGATATGATAACTACAGACTACATCAGCTGGGAAACAATTCTGTTTTTACTATAACACTCCAGGCAGGCCTTTCAGCTATAAAAACACCGTATCCT .....:..::.......:..x..:...x.:........x........:x.:..:..:......x.......:....................x..:..:x.x..x..x.....x.....:.....:..x..:............ 144M 116/144 80.6% 144/94230402 0.0% 0/144 0.0% -5340475 -88889927 +32329 chr4 + 190214555 1338404 1338403 1340135 1732 CCTTGACCCGATGCT---CAGACAGTGCTACAAGGAGGACGGCAGCTCCAAGAGCCCTGACTGCCCTGTGTGCAGCCGCTCCCTGAACAAGCTGGCGCAGCCCCTGCCCATGGCCCACTGTGCCAACTCCCGCCTGGTCTGCAAGATTTCTGGCGACGTGATGAACGAGAACAATCCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAATGTGAG----GGGGGCAGGGC----AGGGGGGCCAGGCTGGCA-----CGCA-------TCGCCATCGGGACAGGGCTGTGTGGGACGGGCAGGGCAGGGGGGCCAGGCTGGCACGCATCGCCATCGGGACAGGGCTGTGTGGGACGGGCAGGGCGGGGGGCCAGGCTGGCAC-GCGTCGCCATCGGGACAGG-------------GCTGTGTGGGGCGGGCAGGGCAGCGGGGCCAGGCTGGCACACGTCG------CCATTGGGACAGG--GCTGTCCTCTCGCCCCACCCTGCCTTAGCTTCGTTCGAAATGGATGAAGGGGTGGGA-AGGACAGGCGAGGTGGCCCCGGGATTTCTTTGGCAGGTGT----GCCTTCG----------GGAAGGAACTTTGCCTGAGAGGATGAGTCATTCCCTGGTGGTTCATTGTGGGGATTTTCCATGGAAATCCGTGTGTACGTTGTAGTCGCTTGCCTTAATGCATTCCCGGTTTTATTTTTCAGTCTCTGCTTTCTATCCGTCAAGATGATAAAGTCGTGTGCCCGAGAACCAAAGAAGTCTTCCACTTCTCACAAGCCGAGAAGGTGTACATCATGTAGGCCC--------CACGTCGTGAAGCGC-------------ACGC----------------CTC------GGGGACGGGCTGCAGTG---GGCGGGGAGGCCACGCCTTCCTCCTGTCCCACGCTCCAGCCTGCC-GCGGCGTTTCTGTTTCTTGCGACCAAAGATCCGTGAGCAACGATAAATACTCTTAGGAAGAGAGAAAATAAGGTTT----CATAAGTTTGTACTTG------------AAAACATTTGGATTGGTAGGATTTTGTAACAC---GTCAACCATTTGATGCTTCTGAAAAGTACTTTCAACTTGCGAAGGAAACTCTTCTTTAAAGACTGACCTAAACACCGAGGGAAACTTAAGAAC-GTTTAAAATATAGGAGTCCGTGAT--TTCCCTGT--------GTTTTCAGTTTCTTTCCTTCTGTGAACGAT---GAGACTTGGAGAACGGGCT-----GGTCCTTCACCACTTCCTGTTGGCCCT-----------GGCCTGGCCGGGGAAGGTG---------GCAGCGGCACCGGACTGACCTGCAGTGACCCGCGA-TGCCGCGCCACGAGGGACACTTATGGCTTCATTCGAGAG---------CTGCTGCCAAAACGCCTGGCGCCGCCACCGTCGGGGGCTGGC------TTCGAGGACGCCCGCCTGCCTCGCGGG--------TCGTGTCCGCGGGACTGTGTTCGTACGTG-----CATAGTTTCGATATCACATCGCGG-----GGCTGTGTTCGTAGCTGCGTCGTTTCGATATCACACCCTCTGTG-TGCCGCCTTACTTCCTGCTTCGAGAATGTA-TAACGTGGAAATCCAC----------------GGGACCAAATTTCTGCAGAGGCCTTGCCGGATGGTTCCATAACTGTAGAGTCTAATTGCTATCCATTACAGAAATTAATCGTTCAGTTGAAAGAAGTA-----------CTGATGACTTTTCAAAACAAATGAACCACCGTAGCTGACAGAGAACCGTATCGTAGAGGTTTGTAGTTAGTGCTTATTTTTGCATGTTGATGTTGACTAGCTAATAA---ACTGTAAATGTAAACCATGCGAAT-AAAATGGTTTTCTATTTCT chr4 - 94230402 6682683 6682682 6684525 87545878 87545877 87547720 1843 CCTTAACTTGTTGTTAAATAGACAGTGCTATAAAGAGGATGGGAGTTCAAAAAACCCAGACTGCCCTGTGTGTAGCAAATCCCTGAACAAGCTGGCTCAGCCTCTGCCTATGGCACACTGTGCCAACTCCCGACTAGTCTGCAAGATTTCGGGGGATGTAATGAATGAAAATAATCCTCCCATGATGTTACCAAATGGATATGTCTATGGATACAATGTAAGTGTTGAAATCAGTGCCTTACTGATGTCTGGAATAGCAGTGGTCACAGTAACTTCCTCTATCAAAATAAGAGCTTGTA--------AACTCAGA------AAGCTGG-AAACATCTCTATT-----------------AACGGGGGGGGGGGGGAACAACACTTTTACAGTAATTCTTAAGGGATTGAATGTGATAAAATTGCTTTGTAAGGAAACTAATGTATTGTGAACATGCAAGCTGATAGCGTGAAATCAAATGGCACTGGAAATTTTCCCCTCT------------------------------------GGAGTGTAATAGTACAGAGCAAGTACCCTGTGGAT-------GAAGATGTTTTCACCTCAGACTCTAAAAAAGAAGAGATTATTTACTAAACAGTTAAGAATGCTCTGA------GTTATGAATGCTTT-----GAGATACTATCGCGAGTATTA-----TCTTCTGATTTCATTC---------TTTTCCAGTCTCTGCTTTCTATTCGTCAAGATGACAAAGTAATTTGCCCAAGAACCAAAGAAGTCTTCAACTTCTCACAAGCTGAGAAAGTCTACATCATGTAGGTCCGTAAAAAACACAAGACGAAGTGCCGCTGGAATTTTGACGCAGTGTACATTGGCATTCCCTGTAAAGGGGGGGGGCCTTAATGTGTGGCAAAGAAGCAAAACCTGCCACCT---TGGTGATCAGACCTGTCGGTGGCATTATTGTTTCTTGCGACCAAAGATCAATGAGCAACAATAAACACTCTTTAAACAAAAGAAAAGAGGAATTATGACTTAAGTTTGTACTTGAATGAAAATGAAAAGAAACTTTGATTGTCAAGGTTTTGTAACATAAGGTCAAAAATTGGACTCTTCTCAAAAGTACTTTCATCTTTTAAAGGATAACTCTCTTTAAAGATGGACACTTGCACTGGGGGAAAAGTTGCAACAGATTGAAACCTA--AATCCATTTTTCTTCCCTCTTCTTCACAATTGTCCGAGACCCTTTTGTTATGAAAGATTTCAGTACTACGAATACTCTCCTTTAAGCTCCTCTTTGCCTTCTTTATGATCCTCTCGTGAAGTAATCCTGAACGTGAATCATGTAACTTATTTCCATGGGAAAATATTGATGT-CGTTGACACGAGACTGGCTTCTCTGGAGGATCAACTAGGGACTGGTTTGAAGGAGTTAAAGTCTTTTTCCAAACC--------CAAATATTTTAAGGAGGTTGCATAAATATCGAGAGAAACTGAGAACATTTCAGGCAAAAATTTGATGCTTGTTTAAATGTTCTTTTTCCAGTCTACCATAGTGTTAAAGTCCTTCTAAAGTTATTAGTTATGTGCATAG-------GGTTCAATATGAAATCATTAGTGCTACTGCCTTATTTCTTGCTTTGAGAATGTACTCACATGAAAATGAGCTGGTATTCTTAAGTGTTGGGCAAAGTTTCTGAAGATGCCTTGCAGGATAATTACATAATTTTAGGGCCTAAATAGTATTCATGACTGAAACTAATAGTTCAATTTTAATGACTACAGAACACATCCTTACGACTTTTGAAAAGAATTAAACCATTGTAGTTTAAACAAAACCATATTGTAGAGGTTTGTATTTAGCGCTTATTTTTGCATGTTGATGTTGATTAGCTAATAAAAGATTGTAAATGTAAAACATGTTAATAAAAACTGTTTTCCATTTCT ....:..::.x..:.---:...........:..:.....:..x..:..x..:.:...x..............:...x:x.................x.....:.....:.....x.................x..:..............x..x..:..:.....:..:..:.....x.........:.:..x..:..x..:.....:..x........:..----.:::x...x..----xx.:x.x.::.:x.:...-----.:..-------:.x.:...:::.:.:.:x:x...:--------.:xx...:------.:.....-.x:....x.:..:-----------------:.....x:...x....::.x.x:..xx:..-.::x:x.:xxx....:x.:-------------...x...::..x::x:.:x.:.x:.x.:x..x..x:..xx.::x..------.x.x...x..x..--::.x...:...x------------------------------------..:...x:.-..x....:xx.:..:x..:xx....-------.x..:...----:...:x.----------:....::.:.x.x:x:x.:.x::.x.:xx..x.:...:------:..:..::x::...-----..:..x.xxx:.::x..xx..-----.:x:..x.x.x.....---------....:.................:...........:.....x:.x.....:..................x.............:.....:..x.............:..--------...:xx::....:..-------------....----------------.:.------....:x....:x:.:..---...:::..:..x.x:...x..x...---:x::.x..x::....:.-.:...:..x:.....................x:........:.....:......x::.x:.:......x.:.:x..----.x..............------------..:.x.:..x.....x:.:.:..........:---.....xx...x..:x.....x.............x...x::.....x.x:::..........:x...x:xx:...:.:......xx.x:x...-.x..:...:x..--.:...:.xx.--......x.--------:..x..x.xxx.::.::.x:.:....x...---::x...xx..:x..xxx.:-----.x....::x:xx....:.xx..::...-----------:x....:x..x.:.xx:..---------x.x::..x.xx:x.:...:x.-.:x....x..x..-..x.x:x:.xx....:x..x:..x..x:.x:..:..::.---------..x:.x.....x.--------.x:x:.::x.x:..:.x.x..------x.....::x:x.:.xxx:.x.:x.:..--------.x:..:::.:xx:.x...x:.:x.x.xx.-----......x.::.x:..x:x:::x:.-----:.:.:...x.:...-------.x...:....x.x.:.x.:x...-.:.:......:...:.....:.........-.x..:..:....xx:.----------------x..:.x..:......x...x.......x....::..x.....:.x...:.:....x.:x...:...x..x....:....x.....:..xx..x:.x..-----------..x.:.......x....x..x.:.....::....:.x.x.x.:....:...:.............x....:.........................:..........---.:............x....:x...-....:x......:...... 15M3I204M4I11M4I18M5I4M7I24M8D8M6D7M1D13M17D30M1I19M13I46M6I13M2I12M36D9M1I25M7D8M4I7M10I38M6D14M5D21M5D16M9D108M8I15M13I4M16I3M6I17M3I25M3D17M1I76M4I16M12I32M3I93M1I12M2D10M2I8M8I30M3I19M5I27M11I19M9I21M1D13M1I39M9I13M8D21M6I27M8I29M5I24M5I14M7D23M1I30M1I16M16I98M11I107M3I24M1I19M 1082/1611 67.2% 1843/94230402 0.0% 353/1611 21.9% -5344279 -88886123 +13876 chr4 + 190214555 1338404 1338403 1338622 219 CCTTGACCCGATGCT---CAGACAGTGCTACAAGGAGGACGGCAGCTCCAAGAGCCCTGACTGCCCTGTGTGCAGCCGCTCCCTGAACAAGCTGGCGCAGCCCCTGCCCATGGCCCACTGTGCCAACTCCCGCCTGGTCTGCAAGATTTCTGGCGACGTGATGAACGAGAACAATCCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAATGTGAG chr4 - 94230402 6680380 6680379 6680601 87549802 87549801 87550023 222 CCTTAACTTGTTGTTAAATAGACAGTGCTATAAAGAGGATGGGAGTTCAAAAAACCCAGACTGCCCTGTGTGTAGCAAATCCCTGAACAAGCTGGCTCAGCCTCTGCCTATGGCACACTGTGCCAACTCCCGACTAGTCTGCAAGATTTCGGGGGATGTAATGAATGAAAATAATCCTCCCATGATGTTACCAAATGGATATGTCTATGGATACAATGTAAG ....:..::.x..:.---:...........:..:.....:..x..:..x..:.:...x..............:...x:x.................x.....:.....:.....x.................x..:..............x..x..:..:.....:..:..:.....x.........:.:..x..:..x..:.....:..x........:.. 15M3I204M 177/219 80.8% 222/94230402 0.0% 3/219 1.4% -5341976 -88888426 +15882 chr4 + 190214555 1339063 1339062 1339465 403 TTATTTTTCAGTCTCTGCTTTCTATCCGTCAAGATGATAAAGTCGTGTGCCCGAGAACCAAAGAAGTCTTCCACTTCTCACAAGCCGAGAAGGTGTACATCATGTAGGCCC--------CACGTCGTGAAGCGC-------------ACGC----------------CTC------GGGGACGGGCTGCAGTG---GGCGGGGAGGCCACGCCTTCCTCCTGTCCCACGCTCCAGCCTGCC-GCGGCGTTTCTGTTTCTTGCGACCAAAGATCCGTGAGCAACGATAAATACTCTTAGGAAGAGAGAAAATAAGGTTT----CATAAGTTTGTACTTG------------AAAACATTTGGATTGGTAGGATTTTGTAACAC---GTCAACCATTTGATGCTTCTGAAAAGTACTTTCAACTTGCGAAGGAAACTCTTCTTTAAAGACTGACCTAAACACCGAGGGAAA chr4 - 94230402 6691403 6691402 6691868 87538535 87538534 87539000 466 TTCTTTTCCAGTCTCTGCTTTCTATTCGTCAAGATGACAAAGTAATTTGCCCAAAAACCAAAGAAGTCTTCAACTTCTCACAAGCTGAAAAAGTCTACATCATGTAGGTCCGTAAAAAACACAAGACGAAGTGCCGCTGGAATTTTGACGCAGTGTACATTGGCATTCCCTGTAAAGGGGGGGGGCCTTAATGTGTGGCAAAAAAGCAAAACCTGCCACCT---TGGTGATCAGACCTGTCGGTGGCATTATTGTTTCTTGCGACCAAAGATCAATGAGCAACAATAAACACTCTTTAAACAAAAAAAAAGAGGAATTATGACTTAAGTTTGTACTTGAATGAAAACAAAAAGAAACTTTGATTGTCAAGGTTTTGTAACATAAGGTCAAAAATTGGACTCTTCTCAAAAGTACTTTCATCTTTTAAAGGATAACTCTCTTTAAAGATGGACACTTGCACTGGGGGAAA ..x....:.................:...........:.....x:.x.....:.:................x.............:..:..:..x.............:..--------...:xx::....:..-------------....----------------.:.------....:x....:x:.:..---...::::.:..x.x:...x..x...---:x::.x..x::....:.-.:...:..x:.....................x:........:.....:......x::.x:.:.:....x.:.:x..----.x..............------------..:.x.:..x.....x:.:.:..........:---.....xx...x..:x.....x.............x...x::.....x.x:::..........:x...x:xx:...:.:...... 111M8I15M13I4M16I3M6I17M3I25M3D17M1I76M4I16M12I32M3I84M 300/400 75.0% 466/94230402 0.0% 69/400 17.2% -5352340 -88878062 +18929 chr4 + 190214555 1349511 1349510 1349857 347 CTCGCATCCCCAGGTCTTCAGAGGAGCAGCTGAGCCGCGCCTACCGCCTGCTGATAGCACAGCTGACCCAGGAGCACGCCGAGATCCGTCTCTCAGCCTTCCAGATTGTGGAGGAACTCTTCGTCAGGTCTCACCAGTTCCGGATGCTGGTTGTTTCCAACTTCCAGGAGTTCCTGGAGCTCACGCTGGGCACAGACCCCGCACAGCCTCTGCCGCCCCCCAGGGAGGCGGCACAGAGGCTGAGGCAGGCGACCACCCGGGCCGTGGAAGGGTGGAATGAGAAGTTTGGGGAGGCCTACAAGAAGCTTGCCTTGGGCTACCACTTCTTAAGACACAACAAAAAGGTA chr4 - 94230402 6705167 6705166 6705513 87524890 87524889 87525236 347 CCCGTTCCCTCAGGTCATCGGAGGAGCACCTGAGCCACGCGTACCACCTGCTGCTGACCAGGCTCCACGAGGAGCACGCCGAGATGCGCTTCTCCGCCTTCCAGATCGTTCAGGAGCTCTTCTCCCGCTCGCACCTCTTCCGCACGCTGCTCGTTTCCAACTTCCAGGAGTTCCTGGAGCTCACGGTGGGGACGGACCACGAGCAGCCGCTTCCCCCGCCCCGGGAGGTGGCCCAGAAGCTGAGGAAAGCGGCCATCGCGGCAGTGCAGGGCTGGCACGAGAAGTACGGCGAGGCCTACAAGAAGCTGTCGCTGGGATACCACTATTTGAAGCAGAACAAGAAGGTA .:..:x:..:......x..:........x.......:...x....:.......x.::.xx:...xxx.x................x..::....x...........:..xx....:......x:.x.x..x....xx.....x.:....x.:.................................x....x..:....x..x:.....x..x..x..x...x......:...x....:.......x.:...:...:.xx...x...x.:..x...x.:.......x:..x.................xx.x:....x.......x:..:.::..x.....:...... 347M 266/347 76.7% 347/94230402 0.0% 0/347 0.0% -5355656 -88874746 +6948 chr4 + 190214555 1351694 1351693 1351839 146 TCTTTATTTTCAATTGCTCAGGTGGATTTTCAAGACACGAATGCTCGGAGTCTGGCAGAAAGGAAGAGAGAAGAGGAGAAGCAGAAGCACTTGGATAAAATTTATCAAGAAAGAGCCAGCCAGGCGGAGAGGGAGATGCAAGGCAA chr4 - 94230402 6708352 6708351 6708497 87521906 87521905 87522051 146 TCTTTTTCTTCATTTCCTTAGGTGGATTTTCAGGACGTGCATGCAAGAACAGTGGCTGAAAGGAAGAGGGAAGAAGAGAAGCAAAAACGATTGGATAATGTTTACAAGGAAAAAGCCAAAAGAGCTGAAAAAGAAATGGCAGGTGA .....x.:....x..x..:.............:...::.x....xx.:.xxx....x...........:.....:........:..:.:x........x:....:x.:....:.....:xx::..x..:.::..:...xx...::. 146M 104/146 71.2% 146/94230402 0.0% 0/146 0.0% -5356658 -88873744 +4341 chr4 + 190214555 1354743 1354742 1354863 121 AAGGTGCAGGAGAACGAGGACAACCTTGCTCTCATCCACGCCGCCCGCGACACACTCAAGCTCATCCGGAACAAGTTCCTGCCGGCTGTGTGCTCGTGGATCCAGGTGAGCCTCGAACCTG chr4 - 94230402 6711442 6711441 6711562 87518841 87518840 87518961 121 AAAGTGCACGAGAACGAAGACAATACTGCTGTAATAAACAGTGTTGCAGATGCTCACAAACTCGTCAGAAATAAATTCTTGCCTTCTGTGCAGTCCTGGATTCAGGTGGGGTAAAGACCTG ..:.....x........:.....:x:....x.x..xx..:x:.::xxx..::.x.x...:...:..x.:..:..:...:....xx.....::x..x.....:......:.x:xx::..... 121M 78/121 64.5% 121/94230402 0.0% 0/121 0.0% -5356699 -88873703 +32220 chr4 + 190214555 1361639 1361638 1362247 609 AGATGCACATGAGATATTGGCCTGGCCGGGCAATTTGCACGGCCTTCCAGGGAGGGCATTAGCATATAAATAGCAGATGCAATGACGACCATCACAGCTGAGCACGTTTAATTTTTGGTTTATAAGATAGAATGGGTTTTTAAACACATAGCCATCAAGGC-GCTGAAAGACAAATGCAATTTGGAACTCACTTGTCTGACGAGGCCTTACATCATTTTTTTTTTTTTTTTTATAAAAAGGGAAACAGACACACATAAAACTGAACAAAAGTGATTTCTTGGGTGAAAAGTAATTGAGACCGCGTACCAAGTTAATTAGATCGTACAAAATTTATTTAATGGCCCCAGCTGTATCTCCCAGCCTGTGTGT-----GGCGGACAGACCTGCCCCTTCACACGGCCTCTCCTCTTCCTTTCCTTCTCAAATAATTAGTAACCTCGCCAC-CCTACTTCTGTGAACTGATTGCATTGTATATTTTAGCCATTTTATTGCTT-GTTTAATTATGATCGTGGAGGCTCAT-TTTTCTAAATCCTTTTAAGTGTGGGTGAGAATCCATTTGTATGAAGCC-AGCAGAGGCCGGAGTGCT----CCTGCCCGCCTCCCCGCGGTGGCTGG chr4 - 94230402 6729336 6729335 6729941 87500462 87500461 87501067 606 AGGTGCACATGAGATATTGGCATGGTGGAATAATTTGCAAGATCTTCCACTGAGGGTATTAGCATATAAATAGCAGATGCAATGACGACCATCACAGCTGAGTACATTTAATTTTTAGTTTATAAGATAGAATGGGTTTTTAAATGCATAGCCATCAAGCCTGCTGAAAGACAAATGAAGTTTAGAGTTCACTTGTCTGAGGAAGCCTTACATCATTTTTTTTTTTT------AAAAAAGGGAAACAGACACGCATAAAACTGAACAAAAGTGATTTCTTGGGTGAAAAGTAATTGAGATTGCAAACCAAGTTAATTAGACCATGCCAAATTTATTTAATGGTCCCAGCTGTAGTTTGCAAGTGGTGTTTTAGTAAGTAGATAGGACT---TCTTCGTGTGCTATCTTTTCTT------TTTCTAAAATAATTAGTGAATGCTGAACATCTACTCCTATAAACTGATTGCATTG--TATTTCAGTCATTTTATTGCTTAATTTAACTATGATTGCAGAGGCCCAGAGTTTTTAAATCCTCTTAATAGAAAGTAACAATCAATTTGTATAAAACTGGGAAGAGGACCAAAGGCTTTCCCTTGCGTATTTCAATGTGGTGTATGG ..:..................x...:x.:::........x.::......xx.....:.............................................:..:..........:...........................::.............x.-...............x.:...:..::............x..:.......................------x..................:..............................................::..:x...............:.:.:.x...............:..........x:.:x..:x:x....x.-----:.::..:..:x..---:....::::.x:x...::....------:....x...........:.x:x.xxx..-:.....:..:.:..............--.....:..:.............-:.....:......:.::.....:..x-x...:........:....xx.x::..:.x....x........:..:.:-:.x.....x.x:.:x...----.:...x::::..xx:.:....xx... 161M1I65M6D137M5I13M3D22M6D28M1I26M2D22M1I26M1I48M1I18M4I26M 475/592 80.2% 606/94230402 0.0% 31/592 5.2% -5367697 -88862705 +36806 chr4 + 190214555 1363354 1363353 1363932 579 AGAAAGAAGGTGTAATTCCTAATAGTTACCTGAGCAGTTGAAT--ATTTTTT----AGGAAATGAAAATTTGATAAAAGTCCCCGATGAAATTCAAGGGTGCGAACAGGAAGCATAATATTTTTTGAAAACGACGCCCATATTTAAAATCTGGCACTATATGTTATGCATTGTAGCACCCGGTCCACATCTACCTTTTAGAAAATTAAAACACATAAATTCTGTTTAGTGTGTGATAACGCGCTGCACTGGCTGAGAACCGTAATGCCC-TGAAACCTTGGGCTGCTCTCCACCTTTCATAAATTCCTGG-CAGATTCTGTACAGAAA-TAATTTTCAGGTCCGTGGCTTGTTGTTATTCAGACGTGATGGATCGCCATCATTTGCTCAGCGCGGGAGTTAAGTGCCCCTGTCATTTCCAAAGAGTATAATTGGGACGTTTCACAGGTCAGCGGTGGAGACAGGCTTCCCTTTTGATCAGTGTTAGACTGATAACAAAAATTACAGTTTCCAGTGATTAATGTCTCCTGTGCTTCCCAGATGCTCAG-CAGTGGGATGCTCCTAAACAAAGTGCACTTG-GTCTGATGAT chr4 - 94230402 6731247 6731246 6731835 87498568 87498567 87499156 589 AAAAAGGGGACTTAATTCTTGAAAGTTAGCTAAGCAGTTAATTTTATTTTTTTTACAGGAAATCTAAATTTAATAGGAGACCCGAGTGAGATTCAAGGGTGTGAACAATAAGCATAATATTTTATGAAAATGACCCCCATATTTAAAATCTGGCATTATATGTTATGCATTGTAGCACCAAGTCCACATCTACCTTTTAGAAAATTAAAACACATAAATTCTGTTTAGTGTTTGATA-TGCAGTGCACTAGCTGAAAGCCATAATGCCCCTAAAACCTTGGGTTGCTTTTCACCTTTCATAAATTCCTGGGTAGATTCTATACAAAAAATAATTTTCAGCTCCGTGGCTCATTGTTATTCAAACTTGATTGATCGTCGTCATTTACTCAGTGAGGAAGTTAAGTGCTCCTGTCATTTCCGCAGAGTATAATTGGGACGTTTCACAGGTCAGCGGCAGTGACAGGTTTCCCTTTTGATTAGTGTTAGACTGATAACAAAAATTACAGTTTCCTATGATTAATGTTTTCTATAGTACTTGAATGCACAGTTCATGGATTATACCTAAACAAAGTGAATTTGCATCTGATTAT .:....::.::x......:.:.x.....x..:.......:.x.--.......----.......xx......:...::..x...x::...:...........:.....:x..............x......:...x....................:.......................x:..................................................x.....-:..:x......:.....:.:..:........-.:..........:....:.:....................-:.......:....:...-..........x.........::..........:..x....x.....:.:......:.....:.x..:..........:............:x.................................::.x......:............:.................................x:..........:.:..:.:x.x.::::....x...-:x:...:x.::x.............x.:...-:......x.. 43M2I7M4I181M1D31M1I40M1I17M1I218M1I31M1I10M 486/578 84.1% 589/94230402 0.0% 12/578 2.1% -5367893 -88862509 +6423 chr4 + 190214555 1366311 1366310 1366436 126 TTTCCACAGACAGAAGCCCTGGGGGATGCGGAGGAAGATGAGGACGATGAGGA---CTTTGTGGAGGTCCCTGAGAAGGAGGGGTATGAGCCACACATCCCCGACCACTTGCGGCCTGAGTATGGTGAG chr4 - 94230402 6745003 6745002 6745131 87485272 87485271 87485400 129 tCTCTGTAGATGAAAGCTTCAgatgatggtgatgatgacgatgatgatgaagatgaCTTTGTGGAGGTCCCTGAGAAGGAAGGTTATGAGCCCCACATTCCAGACCACCTGCGTAAGGAATATGGTGAG .:..:::...:::....::::.:x....xx..x..x..:..x..:.....:..---........................:..x........x.....:..x......:....xxxx..:......... 53M3I73M 94/126 74.6% 129/94230402 0.0% 3/126 2.4% -5378692 -88851710 +6423 chr4 + 190214555 1366311 1366310 1366436 126 TTTCCACAGACAGAAGCCCTGGGGGATGCGGAGGAAGATGAGGACGATGAGGA---CTTTGTGGAGGTCCCTGAGAAGGAGGGGTATGAGCCACACATCCCCGACCACTTGCGGCCTGAGTATGGTGAG chr4 - 94230402 6734390 6734389 6734518 87495885 87495884 87496013 129 TCTCTGTAGATGAAAGCTTCAgatgatggtgatgatgacgatgatgatgaagatgaCTTTGTGGAGGTCCCTGAGAAGGAAGGTTATGAGCCCCACATTCCAGACCACCTGCGTAAGGAATATGGTGAG .:..:::...:::....::::.:x....xx..x..x..:..x..:.....:..---........................:..x........x.....:..x......:....xxxx..:......... 53M3I73M 94/126 74.6% 129/94230402 0.0% 3/126 2.4% -5368079 -88862323 +9897 chr4 + 190214555 1367361 1367360 1367552 192 TTTGTGTGGAA-------TGGACAAGTTGGTTTCAATCAGAGTCTGTAAGAAGAGATGTAGATTTGTTAAGAGAACTTAGATGATTAGACAACTCATGTGTGAAGATATGACCCATTAAGGGTGTCATGCCGAATTAGCACAGCCAGGCTTCTAACGACCTTCCATTTGTATGGTCCTGTTT---ACTGGGGCCTGCTGTCT chr4 - 94230402 6748487 6748486 6748688 87481715 87481714 87481916 202 TTTGGGTGGAGAGAGAATTAAACAAGTCAATTTGAATTTCCATTTGTGTGATTAAATGTAAATTTGTTAAAAGAATTTAAGTGATTAGATAACTGAAGTATGAAGATATAACCCATTAAGGGTGTCATGCCAAATTAGCATTACCAGACTTTTAATGACCTCCCATTTGTATAATCCTTATTTACACTTGCACCTGATGTCT ....x.....:-------.::......:::...x...:xxx:.:...:x..xx.:.....:.........:....:...::........:....x.x..:.........:.....................:........:x:....:...:...:.....:..........::....xx..---...x.x:....x..... 11M7I164M3I17M 147/192 76.6% 202/94230402 0.0% 10/192 5.2% -5381126 -88849276 +9897 chr4 + 190214555 1367361 1367360 1367552 192 TTTGTGTGGAA-------TGGACAAGTTGGTTTCAATCAGAGTCTGTAAGAAGAGATGTAGATTTGTTAAGAGAACTTAGATGATTAGACAACTCATGTGTGAAGATATGACCCATTAAGGGTGTCATGCCGAATTAGCACAGCCAGGCTTCTAACGACCTTCCATTTGTATGGTCCTGTTT---ACTGGGGCCTGCTGTCT chr4 - 94230402 6737885 6737884 6738086 87492317 87492316 87492518 202 TTTGGGTGGAGAGAGAATTAAACAAGTCAATTTGAATTTCCATTTGTGTGATTAAATGTAAATTTGTTAAAAGAATTTAAGTGATTAGATAACTGAAGTATGAAGATATAACCCATTAAGGGTGTCATGCCAAATTAGCATTACCAGACTTTTAATGACCTCCCATTTGTATAATCCTTATTTACACTTGCACCTGATGTCT ....x.....:-------.::......:::...x...:xxx:.:...:x..xx.:.....:.........:....:...::........:....x.x..:.........:.....................:........:x:....:...:...:.....:..........::....xx..---...x.x:....x..... 11M7I164M3I17M 147/192 76.6% 202/94230402 0.0% 10/192 5.2% -5370524 -88859878 +26102 chr4 + 190214555 1369421 1369420 1370241 821 AGTTCATAACACTAGTTTATATTCTGCCGCTGTTTTTTCAATTAAACGTGGGCGAATCTGAAGTAGTTAGATTTAGTCTAAATCCACACCACGGAGGAAACC-GTGCTCTTTTTCTTTCTCATTTCTTCCTCTGAATTTTCACTGAGGGGCCTTTATCTTCCCCTTAATCCTACCATTTCTGTCAGGACATAATCTCTTTCTCCAATTTACATTTTAATTACAAGGCCAGCTGAACTAGGTAAAATCAATAATGTCAGCGCTGGGCAGGCCGCCTGGGCGCAGAGGCCCC--CCTCTCCGTTTCCTACCATCGATTCCCTCCCT---CACTGTCTGCTTTGGTGCTTCAGGCAAATAGGTGCCACTTGGCCAATGTAAAC-AGAAAAGGGGATTTGGACATTTTTATGATTCTTTCTCAAAACAACT-GTGGGAGTGAATTTGAGCCAAGATACTGGACTCGAGTGAGACGCCGTGCGGGCAAGGCGGGCGCCGCGTTC-------GGCTGTGACGTGTGGC----CTCTTGTTTTCCGGGAGTCGTT--------------------ATTCTTCCTGAAAATG----CCCT--------CAGTGCCTGAGGAATG-----CTGTCTGATTTTTGGGGTTTTGCTTTGAAAGTATGTCAGAGAGATTGATTTTCCACGCGATGCGCAAGTGGGAGTGTGTTTAGTGCC----CTAAGTATTTACCCTGCTTTAACACGCTTACCCATCTTTTTAATGGTTTAAAACAACAAATCGATGAAAAATATATTTCATTCTTGTAACTCTTAGGAATTCTCAGATTGATCTTTTGGCTGCGATTGTATCTAAATGTCACATTGTTCACTTGTCAGTCT---TGCCTCCG chr4 - 94230402 6751748 6751747 6752578 87477825 87477824 87478655 831 AGTCTGTAATACTTGTTTATATTCTGTCTCCGTTCTTTCAATTAAACTGAAGTGAATGTGGAGTAGCTAGATTTCGTCTAAATCCACACAGCTGAGGAAACCCATGCTTGCT-------------CTTTCTCTAAATTTTCACTGAGGGGCTTTTATCTCCCC--TAATCCCACCATTTCTGTCAGGACGTAATCTCTTTCTCAAATTTACATTTTAATTACAAGGCCAGCTGAACTAGCTAAAATCAATAATGTCAGCATTCAGCAGCCTAACTTCG-GCTGAAACCCCAGCCTCTCTCTTTCCTTCTATCGATTTGTCTTGTGAATACGCTCTACTTTATTGCTTCAAGCAAATAGATGCCATTTGGTCAATTTAAACAAAAAAAGGGGACTTAAACATTTTTATGATTCTTTCTAAAAGCTGCCAGTGGGA--CAGTTTGAAGCCAGGTACTGTGCTCGTGTTAA----TAAATAGACAGAACA---GCAGAATTCTTAAGAGGAATTTTACTTGTAAAGCTGCACTTAATTCCATCCATGCATTAAAAACAAAGCAACAGAAAAACCCACCCTGACATTGGGCACCATTGAGATGGCAGTGTCTGCATGGTGGCTCTTCATCTCGTTAGCAAGAACTAATTTTATAAACAGATTAAAACAA-------TCCACG----------GTCGGGGTGGTGTTAGCAGCGTGGCGATGTATTTAC----TTTTAGCTGTTTTGC------TGTTAATGGTTTAAAATAAGAAATCAATGGGAAAAATAGTTT-TTCTTGTAGCTCTTAAGAATTCTTGTATCGATCTTTTGAGTGTGATTTTATCTAATTGTCAACTTGTCCATTTATCTCTCTCTGTGCCTCTG ...:::...:...x............:.x.:...:............xx::.:....x..:.....:.......x..............x:.x.........-:....:x:.-------------...:....:.................:.......:...--......:.................:.............x...................................x...................::.x:....x.::x..xx.-..x..::....--......:x......x.:.......:x::::x.---:..xx...:....:x.......:........:.....:....:....x.....-.:.........:..::....................x...:.x:.:-......--x.:.....:x.x..:.....x:....x..x.:----::x:::.:..:::.:---..x.x:...-------.:x.x.x..x...::x----.x...:x..:.xxxx.xx.:..--------------------.::.x:.....x.x..----..x.--------.....:...x:x::..-----:::...x:..xx:::.:x:.x::...:x..::.x:.:.:.:x:.-------......----------..x..:...xxx....::x.----.x.x........----:....:.xxx:..:.------.x..............:..x.....:...::...x...x..:-........:......:.......::x..:.........:x..:....x.......x.....xx....:..:..:..xx...---......:. 102M1I9M13D38M2D113M1D11M2I32M3I53M1I46M1I6M2D32M4D15M3D9M7I16M4I22M20I16M4I4M8I16M5I44M7D6M10D20M4I12M4D15M6D42M1D81M3I8M 562/768 73.2% 831/94230402 0.0% 116/768 15.1% -5382327 -88848075 +26483 chr4 + 190214555 1369421 1369420 1370241 821 AGTTCATAACACTAGTTTATATTCTGCCGCTGTTTTTTCAATTAAACGTGGGCGAATCTGAAGTAGTTAGATTTAGTCTAAATCCACACCACGGAGGAAACC-GTGCTCTTTTTCTTTCTCATTTCTTCCTCTGAATTTTCACTGAGGGGCCTTTATCTTCCCCTTAATCCTACCATTTCTGTCAGGACATAATCTCTTTCTCCAATTTACATTTTAATTACAAGGCCAGCTGAACTAGGTAAAATCAATAATGTCAGCGCTGGGCAGGCCGCCTGGGCGCAGAGGCCCC--CCTCTCCGTTTCCTACCATCGATTCCCTCCCT---CACTGTCTGCTTTGGTGCTTCAGGCAAATAGGTGCCACTTGGCCAATGTAAAC-AGAAAAGGGGATTTGGACATTTTTATGATTCTTTCTCAAAACAACT-GTGGGAGTGAATTTGAGCCAAGATACTGGACTCGAGTGAGACGCCGTGCGGGCAAGGCGGGCGCCGCGTTCGGCTGTGACGTGTGGC----CTCTTGTTTTCCGGGAGTCGTT--------------------ATTCTTCCTGAAAATG----CCCT--------CAGTGCCTGAGGAATG-----CTGTCTGATTTTTGGGGTTTTGCTTTGAAAGTATGTCAGAGAGATTGATTTTCCACGCGATGCGCAAGTGGGAGTGTGTTTAGTGCC----CTAAGTATTTACCCTGCTTTAACACGCTTACCCATCTTTTTAATGGTTTAAAACAACAAATCGATGAAAAATATATTTCATTCTTGTAACTCTTAGGAATTCTCAGATTGATCTTTTGGCTGCGATTGTATCTAAATGTCACATTGTTCACTTGTCAGTCT---TGCCTCCG chr4 - 94230402 6741474 6741473 6742304 87488099 87488098 87488929 831 AGTCTGTAATACTTGTTTATATTCTGTCTCCGTTCTTTCAATTAAACTGAAGTGAATGTGGAGTAGCTAGATTTCGTCTAAATCCACACAGCTGAGGAAACCCATGCTTGCT-------------CTTTCTCTAAATTTTCACTGAGGGGCTTTTATCTCCCC--TAATCCCACCATTTCTGTCAGGACGTAATCTCTTTCTCAAATTTACATTTTAATTACAAGGCCAGCTGAACTAGCTAAAATCAATAATGTCAGCATTCAGCAGCCTAACTTCG-GCTGAAACCCCAGCCTCTCTCTTTCCTTCTATCGATTTGTCTTGTGAATACGCTCTACTTTATTGCTTCAAGCAAATAGATGCCATTTGGTCAATTTAAACAAAAAAAGGGGACTTAAACATTTTTATGATTCTTTCTAAAAGCTGCCAGTGGGA--CAGTTTGAAGCCAGGTACTGTGCTCGTGTTAATAAATACACAGAACAGCAGAATTCTGAAGAGGAATTTTACTTGTAAAGCTGCACTTAATTCCATCCATGCATTAAAAACAAAGCAACAGAAAAACCCACCCTGACATTGGGCACCATTGAGATGGCAGTGTCTGCATGGTGGCTCTTCATCTCGTTAGCAAGAACTAATTTTATAAACAGATTAAAACAA-------TCCACG----------GTCGGGGTGGTGTTAGCGGCGTGGCGATGTATTTAC----TTTTAGCTGTTTTGC------TGTTAATGGTTTAAAATAAGAAATCAATGGGAAAAATAGTTT-TTCTTGTAGCTCTTAAGAATTCTTGTATCGATCTTTTGAGTGTGATTTTATCTAATTGTCAACTTGTCCATTTATCTCTCTCTGTGCCTCTG ...:::...:...x............:.x.:...:............xx::.:....x..:.....:.......x..............x:.x.........-:....:x:.-------------...:....:.................:.......:...--......:.................:.............x...................................x...................::.x:....x.::x..xx.-..x..::....--......:x......x.:.......:x::::x.---:..xx...:....:x.......:........:.....:....:....x.....-.:.........:..::....................x...:.x:.:-......--x.:.....:x.x..:.....x:....x..x.:xx:x::::.:.:xx..xx.:::x.:.x:xxx.:x.x.x..x...::x----.x...:x..:.xxxx.xx.:..--------------------.::.x:.....x.x..----..x.--------.....:...x:x::..-----:::...x:..xx:::.:x:.x::...:x..::.x:.:.:.:x:.-------......----------..x..:...xxx....:.x.----.x.x........----:....:.xxx:..:.------.x..............:..x.....:...::...x...x..:-........:......:.......::x..:.........:x..:....x.......x.....xx....:..:..:..xx...---......:. 102M1I9M13D38M2D113M1D11M2I32M3I53M1I46M1I6M2D79M4I22M20I16M4I4M8I16M5I44M7D6M10D20M4I12M4D15M6D42M1D81M3I8M 560/775 72.3% 831/94230402 0.0% 102/775 13.2% -5372053 -88858349 +3235 chr4 + 190214555 1380878 1380877 1380997 120 AGTGCCCTTTCCATGGGAAGATTGTTCCACGGGACGACGAAGGACGGCCGCTCGACCCGGAAGACAGGGCTCGTGAGCAGCGGCGGCAGCTGCAGAAGCAGGAGCGCCCGGGTAGGTCTG chr4 - 94230402 6763876 6763875 6763994 87466409 87466408 87466527 119 AGTGCCCTTTCCATGGAAAGATAATTCCTCGGGATGAGTGTGGGGTTCCTATTAATGCAGAGGACAGAGCCAGAGAAGAAAAGATGCGCTTTGAGAAGCAAGCA-ACTCAGCCAGGTTTG ................:.....x:....x.....:..xx:x..:xxx..xx.::.:x.:..:.....:..:x.x..:x.:x:.xx..:x:.xx.......:.x:-:.:.:.x:....:.. 104M1D15M 73/119 61.3% 119/94230402 0.0% 1/119 0.8% -5382998 -88847404 +36794 chr4 + 190214555 1382168 1382167 1382739 572 GGCGGGAGGGCCCTGACCTGCTAATCTCCGG-GTGAGGCCTTCCCTGGTGGCTCACACTCAGGAGCAAATTAAGTGCCTATTTTTTGTGTCAACCCTGAAGAGTATCTGGTTTTCCAGCCCTTGGTGACTTGTTAACAAACAGGTATCAGGCC--GCGGGCTGCGGCCAGC-GCTGGCCAGTCAGATGTGAAATAGTGTCTCTTTACTAACTACGGTATTGATCCCCGCCT-CCCTCGCGCACGGCGCAATTTTCCTTTCCCTGGTGCTAACCTCAGTGACAATGTGCGTGCTGCTGCAGGG-CCCGTCAGCGCCCAGGAAGGCCGCGCGGTCCCAGCAT-CTATTGATTTTCCTCAAAGGCTTTTAAATTGCTCCTTCATTTCACTGAGACGCTCGCTCCATCTCTGCTGGGTGCCGGGGCTTTTTCGTTGTGTTTAAACAATTGCTCCATTCACCGGGTTCCTAAACTGTGGCGCCTTCTTATTACTGGGAGATAAACTGTTTGGACAGTTTTCCTTAATCTTGGATTAATCGTTCCTGTATCTGAATTGTG-GGCCCCGTATTCCTTCACTTCAAAG chr4 - 94230402 6766990 6766989 6767569 87462834 87462833 87463413 580 GGAGGGATTACACTGACCTGCTAATCTGCAGTGTTCATCCTCTTCCAATAGTTCGCACACAGGAGCAAATTAAGTGCCTATTTTTTGTGTCAACCCTGCAGAGTATCTGGTTTTTCAGCCCTTAGTGACTTGTTAACAAACAGGTATCAGGACAGGCTGGTGAAGGCAGGCCGCTGGCCAGTCAGATGTGAAATAGCATCTCTTTACTAACTACAGTATTGATTCCCGCCTACCCCTGCAAACTGTGTAATTTTCTTTTCCCTGCTGCTAAACTCAGTAACAATGTATGAAGAGCTTTAGGGGCCCATCAGTGCTCAAAAAGGCTGCTCTTCCCTGGCATTCTATTGATTTTTCTCAAAGGCTTTTAAATTGCTCCTTCATTTTACTCAAATGCTCATTTCATCTCTACTGGATGCCGGCATTTTTTCGTTGTGTTTAAACAATTGCTCCATTCACTGGGTTCCTAAACTGTGACGCCTTCTTATTACTGGGAGATAAACTGTTTAGACAGTTTTCCTTAATCTTGGATTAATCGTTGCTGTATCTGAATTGTACTGTTCTGTATTCATTCAGTTCCAGG ..x....xx:.x...............x.:.-..xx:x...:::.:::.:.:..:...x.......................................x...............:........:...........................x.--..x..:x:x...x:..-........................::................:........:.......-...::..:x..x.:.:.......:........x......x......:.......::.x:xx...x:....-...:....:..:..::.....:..x.xx:..::....-...........:..............................:...x.:.:....::.:.......:....:......x::..................................:................:...............................:...............................x...............:-x.::.:......x....x...x.:. 31M1I121M2I16M1I59M1I70M1I37M1I213M1I25M 479/572 83.7% 580/94230402 0.0% 8/572 1.4% -5384822 -88845580 +8697 chr4 + 190214555 1383650 1383649 1383946 297 GCAAGGCGACCCAGCCCCCCTGTCAGGACGAGACCAAGAGCCCCTCCTGGGGGCCTCGGGTAAG-----AGGCTCTGGTCAGTGCCAGACGTCTCCTGAAGTGCTTGAGTTTTGTTT---GCAGAATGGCAGGACCCTGAGTTGATGAGAGACGTGGAAGCAGCCACAGGGCAGGATCTCGGCTCATCCAGGTACAGCGGGAAAGGCAGGGGGAAGAAGAGGAGG------TACCCCAGCCTCACCAACCTGAAGGCTCAGGCTGATACCGCCCGCGCTCGCATTGGGAGAAAAGTCTTCGCCAAGTAAGA chr4 - 94230402 6769863 6769862 6770160 87460243 87460242 87460540 298 GCACAGCGACTGTGCCCTTGCCTAGGGGTGA---CAAGAACCCTT-------ACCTTAGGTAAGGCTGCAAATTCTGCTTAG-GCTTGAATTTTC--AAAGTGCCTGGTTTTTCTTATAAACAGAGTGGCGAGATCCAGAATTCATGAGAGAAGTCGAAGCAGCCACGGGAGTGGATCTTGGTTCTTCTAAAACGAATGGGAAAGGAGGAAAAAAGAAAGGGAAGAAGAAATACCCAAATCTGACAGACCTGAAGCAGCAGGCTAACACTGCCCGTTCCCGGCTTGAGAAGATAGTCTTCAATAAGTAAGA ...x:.....:xx....::x:x.x:..::..---.....:...:.-------:...::......-----.:::....x.:..-..:x..xx.:..--:......:..:x....x..x---:....:....::..:..x..:..x........x..x...........:..:xx......:..:..x..:.::xxx.::........x:.::::.....::...:.------.....x.::..x..x:........xxx......:.:..:.....:x.:..xx...:..::.x.......:x:........ 31M3D11M7D12M5I13M1D12M2D20M3I105M6I80M 191/284 67.3% 298/94230402 0.0% 27/284 9.5% -5386213 -88844189 +5692 chr4 + 190214555 1385854 1385853 1385960 107 TTGTTTCCCC-ACAGGGCAGCTGTGCGGAGGGTAGTGGCAGCCATGAACCGGATGGACCAGAAGAAGCACGAGAAGTTTTCAAACCAGTTTAACTACGCACTGAACTA chr4 - 94230402 6773402 6773401 6773509 87456894 87456893 87457001 108 TTGTTTCTCTTGCAGAGGTGCTGTGAAACGAGTGGTGAAAGCAATGAATCAGATGGACCAAAGAAAGCATGAGAAGTTTGCCAACCAGTTTAACTATGCTCTGAATTA .......:.:-:...:.xx......x::x.:..:...:x...x.....:.:.........:.::.....:.........x.x..............:..x.....:.. 10M1I97M 81/107 75.7% 108/94230402 0.0% 1/107 0.9% -5387548 -88842854 +37707 chr4 + 190214555 1402890 1402889 1403919 1030 GCCGGGCCCGGCAGCGGCCTCGGAGGCGGAGCGGCACGGGGCTCAGAGGTGCGGCGCGTAGAAGGCGGGCGCCCCGTAGGTCTGCGAGCCCAGCACGAAGGGCGAGAGCACCGCCGGGCTCGACAGGAACGGCAGCTGCGCGGCGCACACCAGGCCTCCGGGGCCGTGCGCCGGGTACCCGGCCGGGCCGTGCATGCCGAGCGGGGCGCCCATGGGCGGCGAGGGGCTGAGCGGGCTGAGGCCGCCGGGCAGCCCCGTGCCAGGCCCGGCCCCCGGTCC------CGGTCCGCCCC--CGCCGCCGGTCGGAGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTTCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGACAGCGCCAGGTTGAGGCGCTCGCACACCGACAGGTAGCGCGTGGCCTTGAACTTGTTCTCCAGCGCCACGAGCTGCTCGTAGGTGAAGGCGGTGCGCGCTCGCCGCGGCTTCCCGGACTTGGAGTCGGACCCCGTGCGCTTCCGCTTGGGCTTCGCCGCCGTCGCCGTGCCCTGCGGGGTGGTCCCCGCGCCCCCCGGCGCCGCTGCACCTCCCGGTGGGCCCTGGGCAACGGGCGAGTTCTCGCGGGGTCCGGGGGCCGCTGCCTCGTCGACGGTGGCTCCGGGGGACGCGTCGGTCT-CAGCCGCGCCCTGGCAACCCGACCCGCGGGCCCCGAGGCCGCCGCCGCCTCC-CCGCGCCTCCTCCGCGCCTCGCGCCGCCTCCGTCTCGGGCGCTTCGTCCTCGTCGTCGTCCTCGTCGTCGGGAACCTCGTCCCCGCTGTCCGCGCTCGGGCTGTGGCCGCCGCCGCCGCTGCTGTAGCCGTTGGTGTCGTTGGTCTCGGCCTCCCCTGCCTTGAAGGGGTCGCCGGCGTCTGCGGGAGGGAGGGACAAGGACAGGGCAGGGCAGTTAGGACCGGCCGGTTCCCAGATCCCGCCCT--CCGCGCGCCCCGCTTCCTCCCCCAGGGTTCCCTCCCGC chr4 - 94230402 6788239 6788238 6789161 87441242 87441241 87442164 923 GCCGAGGGCAGCGCGGGCTGAGGGAAAGAGGAGGCGCGCG-CTTATAGGTGAGGGGTGTAGAAAGCCGGAGCGCCGTAAGTCTGCGAGCCCAGCACGAAGGGCGAGAGGACGGCTGGGCTGGGCAGGAAGGGCAGCTGGGCGGCGCACACCAACCCCCCGGCCGGGTGACCCGCGTAGCTGCCGGGCCCGTGCATGGACAGCGGGTTGCCCATGGGCGGCGAGTGGCTGAGCGGGCTGAGGccgcccggcagcgcccctcc--gcccagcgccccgcccgccccgccgcccgccccgccgccgccGGTGGGCGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGAGCGCCAGGTTGAGGCGCTCGCACACCGACAGGTACCGCGTGGACTTGAACTTGTTCTCCAGCGCCACCAGCTGCTCGTAGGTGAAAGCTGTCCGCGCCCGCCGGGGTTTGCCCGACTTGGAGTCCGAGCCCGTGCGCTTCCTCTTGGGCTTGGC--CTGCTGCTGCCCTCCGCCGGGCTG------------CTGGggcggcggcggctgctggggcggc---ggcggcggg-----------ggcggcggAGGGC-----------CGACGGCCGCCTCGGGAGCCTCGGAGTGCTGCGGGCCCGCCTCGGC--CTCG--CCGGGAGCCGCCGAGCCGCTGCCGGTGCTGCCGCTGCTGCTGCTCTCCTCGCTGCACAGC----------------------------TCCTCGTCGTCCTGCAGCT------CGCTGTCGGGGCTGCGGCT-CGGCCG--------GCTGCTGTAGTC----------CAGGTCGCA--CTCCTCGGCCTTGTAGAGCTCGCCGTCCTCTGCG------------CAAAACAGACAGCCGCCGTTAGAGCT--CCG----CCAGCCCCAGCCCCGACCGCGCGCGGCCCCGACGCCCTTCGGCCTCCCCGCTGC ....:.xx.:..:xx...:xx..:::x.::.x...:..x.-..:.x.....x..x.:......:..x..x..x.....:.............................x..x..:.....x.:......x........x.............:x..:....xxxx...xx...x...x.:.x.x..x.........xxx......x:................x......................x......x..x:x..--....:..x...x.:..------.x.:.......--..........x..x.........................................x..................................................x...................................x.......x........................x.................:..x..x.....:.....x..:..x..x...........x..x.............x.........x..--.:.::..:.:x.:.:..x...:x.------------.:..x..x..x..:x..x.:..x.x.x.---...::....-----------..x.x.x.:....-----------......:x..::....:.x.x..xx.xx..-.:.x.x....::...--.:..--...x.:...x.x::.....:....x:x.:-....xx..x..x.x.x......xx.:.xx.----------------------------...........xx.x.x..------.......x.x...xx....-:.....--------..........:.----------:x....x.:--....:.x......x..:.x......x.x......------------x.::....:xx:xx..x.....::.:--...----....x:..x....:--........xx.x.:xx.x...::x..x:....:x.:.. 40M1D220M2D16M6I11M2I262M2D24M12D28M3D9M11D13M11D30M1I15M2D4M2D29M1I30M28D19M6D19M1D6M8D12M10D9M2D34M12D26M2D3M4D14M2I38M 704/911 77.3% 923/94230402 0.0% 131/911 14.4% -5385349 -88845053 +12215 chr4 + 190214555 1402911 1402910 1403130 220 GGAGGCGGAGCGGCACGGGGCTCAGAGGTGCGGCGCGTAGAAGGCGGGCGCCCCGTAGGTCTGCGAGCCCAGCACGAAGGGCGAGAGCACCGCCGGGCTCGACAGGAACGGCAGCTGCGCGGCGCACACCAGGCCTCCGGGGCCGTGCGCCGGGTACCCGGCCGGGCCGTGCATGCCGAGCGGGGCGCCCATGGGCGGCGAGGGGCTGAGCGGGCTGAGG chr4 - 94230402 6785689 6785688 6785905 87444498 87444497 87444714 217 GAAAGAGGAGGCGCGCG---CTTATAGGTGAGGGGTGTAGAAAGCCGGAGCGCCGTAAGTCTGCGAGCCCAGCACGAAGGGCGAGAGGACGGCTGGGCTGGGCAGGAAGGGCAGCTGGGCGGCGCACACCAACCCCCCGGCCGGGTGACCCGCGTAGCTGCCGGGCCCGTGCATGGACAGCGGGTTGCCCATGGGCGGCGAGTGGCTGAGCGGGCTGAGG .:.:.x....xx..:..---..:.x.....x..x.:......:..x..x..x.....:.............................x..x..:.....x.:......x........x.............:x..:....xxxx...xx...x...x.:.x.x..x.........xxx......x:................x................. 17M3D200M 173/217 79.7% 217/94230402 0.0% 3/217 1.4% -5382778 -88847624 +6703 chr4 + 190214555 1403077 1403076 1403400 324 CCGTGCATGCCGAGCGGGGCGCC-CATGGGCGGCGAGGGGCTGAGCGGGCTGAGGCCGCCGGGCAGCCCCGTGCCAGGC----CCGGCCCCCGGTCCCGGTCCGCCCC-------------------CGCCGCCGGTCGGAGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACT------------------------TGGTTCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGACAGCGCCAGGTTGAGGCGCTCGCACACCGACAGGTAGCGCGTGGCCTTGAACTTGTTCTCCAGCGCCACGAGCTGCTCGTAGGTGAAGGCGGTGCGCGCTCGCCGCGGCTTCCCG chr4 - 94230402 12453495 12453494 12453853 81776550 81776549 81776908 359 CCACGTGCGCCGTGTACAGTCCCACAGGGGCCACGGGCAGCCCCGCTCGCTGGAAGGGGCTGGAGGCTCCGTACAGGGATGCGCCGGCCACTG---CTGGGCCGCCCAACGGGAAGGAGATGCCGAATGCAGCAGGCGGGAGCA-TGGGCTTGGCTGCCATCTTCAGCTTCTCCAGCTCGGCCTCCTGCAGCCGCTTGGCCTTGGCGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGCTGGAGAACTCGGCACGCTCAGCGATGGACAGGTACTGCTTCTGGCGGAATTTCCTCTCCAGGGCCAGCAGCTGGGCCGTGGTGAAGGGCGT---------CCGGGGCTTCCTG ..::.:::....x.::x:.:x..-..x....x:..:.x:..:xx..xx....:::xx.x.x..x:..:....:.x:..x----......x.:.---.:..x......x-------------------:..x..x..:x.....:-...xx.:...xx..:xx...x......:.x:..------------------------...:x..................................................xxxx.xx.:x.:.:x:.....:xxx.:x........x:..x.xxxx:x...:..x:.......x....xx.....xx.xxx........xx..---------...x.......:. 23M1I55M4I10M3D12M19I17M1D33M24I148M9D13M 207/311 66.6% 359/94230402 0.0% 61/311 19.6% -11050418 -83179984 +7437 chr4 + 190214555 1404156 1404155 1404388 233 ATCACAGCGGAGTGGAAGCTCTGATCGATCCGCAGGGCTGATACACACTTAATTAAACTCATTTTGTGTAGTGTACAAACTAGTTAA-GGCCATTTAATTTATTTCGGCGTATATTACCCCCCAATTACCG----CCGGCGCAGGGCCAGCCAATTGCCGGGCATTTAA---TAACAGGC---CCGGCGGTGGGGC--------CGGAGCCGGCCGAGAGAATGGG-GCTT--GGGGGACCCAAATCCTATGCCC chr4 - 94230402 6792589 6792588 6792841 87437562 87437561 87437814 253 ATTAAAGTGGAGTAAATACTTGTATTGATTAGCGGAGCAGATACAAACTTAATTAAACTCATTTTGTGTAATGTACAAACTAGTTAACGGTCATTTCATTTATTTGGGTTTATAGGACGCTCCAATTAACGGTCTTCATTGGAGAACGGGGCAATTATCCGATATTTAAGGCTATCGGACTTTCTGCCGATGGTTCTGTCATTGCGAAGCCTG--GAAGGAAAGAGCGCTTTCGGGAGAGCCGCCTCCTCCGCCC ..:.x..:.....::.x:..:xx..:...:x..:.:..x......x........................:................-..:.....x........x..:x....xx..x.:.......x..----:.:x:.x..::.x:.x.....::.x.::......---..x.:.:.---.:.x..:...xx.--------..:....x.--..::...x.:.-....--...:..x..:xx....x:.... 87M1I43M4I34M3I8M3I13M8I9M2D11M1I4M2I22M 167/231 72.3% 253/94230402 0.0% 24/231 10.4% -5388433 -88841969 +7306 chr4 + 190214555 1404156 1404155 1404388 233 ATCACAGCGGAGTGGAAGCTCTGATCGATCCGCAGGGCTGATACACACTTAATTAAACTCATTTTGTGTAGTGTACAAACTAGTTAA-GGCCATTTAATTTATTTCGGCGTATATTACCCCCCAATTA----CCGCCGGCGCAGGGCCAGCCAATTGCCGGGCATTTAA---TAACAGGC---CCGGCGGTGGGGC--------CGGAGCCGGCCGAGAGAATGGG-GCTT--GGGGGACCCAAATCCTATGCCC chr4 - 94230402 6789693 6789692 6789945 87440458 87440457 87440710 253 ATTAAAGTGGAGTAAATACTTGTATTGATTAGCGGAGCAGATACAAACTTAATTAAACTCATTTTGTGTAATGTACAAACTAGTTAACGGTCATTTCATTTATTTGGGTTTATAGGACGCTCCAATTAACCGTCTTCATTGGAGAACGGGGCAATTATCCGATATTTAAGGCTATCGGACTTTCTGCCGATGGTTCTGTCATTGCGAAGCCTG--GAAGGAAAGAGCGCTTTCGGGAGAGCCGCCTCCTCCGCCC ..:.x..:.....::.x:..:xx..:...:x..:.:..x......x........................:................-..:.....x........x..:x....xx..x.:.......----:.x:.:x:.x..::.x:.x.....::.x.::......---..x.:.:.---.:.x..:...xx.--------..:....x.--..::...x.:.-....--...:..x..:xx....x:.... 87M1I40M4I37M3I8M3I13M8I9M2D11M1I4M2I22M 166/231 71.9% 253/94230402 0.0% 24/231 10.4% -5385537 -88844865 +22604 chr4 + 190214555 1405132 1405131 1405593 462 GCCCCGCGC---AGGTGCGGCCCGCAGCCTCCAGGCGCAGAGCCGGTGGCCGCGGCCCAGCCCGGTCCGCCCCGCGCTGTCCT---CCCTGTGCTTCAGTAGGGCC-------GGAAAGTTGGA---GGGAGGAGGAGGGGACACAAAAAGCAATCAGGAGC--AGGTCGAATGCAATTCGCGATCAATAGCGGCCCCTAATAAGTGTAATAGGTTTTAATCGAGTAATTATCCGAATTTTGACCCTATAATTTAGATGTTCGGGGGGAGTTTGCAAGGTGCTTGAAAGAGATATGCACGCGCCG-TAATGGGATATCGACCCGACCGG---------------GGGCGCGGGCCGCCCCATTA-CCGGCCGCTTTCCGCCGCTAAGCACATTTCCCCTTAACTGTAATCGAAGGGATTTAATTGTTTTTCCAGCGATAACCAGCGTTTTGTCACAATTAGTCTGATTTGTCCAAAAAAAA---AGAGAGAGAGGGAGAA chr4 - 94230402 6791568 6791567 6792061 87438342 87438341 87438835 494 GCTCCGCGCTCGGGACGCGAATCGC----TCCCCGCACCGCTCCCGGAGCTGC--CTCTGCCCGGAGCGCTCCGCTGTGCCCGGAGCCGCGGGGTTTAGAGGTGACAAACTCGGGATATTTGGACCCAGAAAGAAAGAAAGAAAAAAAAAGCAATCTCGAGCTTGGGTCGAATGCAATTCCCGATCAATAGCGAGCCCTAATAAGTGTAATAGGTTTTAATCGAGTAATTATCCGAATTTTGACCCTATAATTTAGATGTTAGGAAAGAGTTTGCAAGGTGCTTGAAAGAGATATGCACAATTCGATAATAGGATATCGATCCAGGCAGTCCTACATGCCACTCTGGGGCGATTTCCCCCATTATCCAGCCTCTTTACGCTGCTAAGCACATTTTACCTTAAATGTAATCGAAGGAATTTAATTGTTTTTCCAGAGATAACCAGCATTTTGTCACAATTAGTCTGATTTGTCCTAAAAAAAGCCAAGGGGAGAGAGAAAA ..:......---:.::...:x:...----...xx..:.x.xx..x.x:..:..--.:.x......xx...:....xx..:..x---..x:.x.x..:..x:.x.x.-------...x.x.....---:.:.:..::::::..x.x...........xx....--:...............x............:x..................................................................x..:::................................:xx:..-....:.........:..::x.:.---------------x..x...:x::x........-..:...x....x...:.............:x......x............:..................x..........:...........................x.......---.::.:.....:..:.. 9M3I13M4D24M2D28M3I20M7I11M3I35M2I141M1I23M15I20M1I116M3I16M 365/456 80.0% 494/94230402 0.0% 44/456 9.6% -5386436 -88843966 +4261 chr4 + 190214555 1406855 1406854 1406968 114 TGGTGGTCAGCGGCGCGTCGCTGCGCCTCCGCTCGTCCGGAAA-CGGCGCGCCAGCCTC-CTTGGCTAAGGGGGAGGAGACAGCCCCGGCTTTTAAATAATTGCGGGATCAATCTG chr4 - 94230402 6794127 6794126 6794242 87436161 87436160 87436276 116 TGGCTGTCAGCTCTGTTTCAGCACACCTCCACTCATCTGGAAAGCATCTAAATAGCCTTATTTGGAGAAGTGGGAGGAGATGACGCTTTCTTTTAAATAATTGCGGGATCAATATG ...:x......xx:.:x..:x::.:.....:...:..:.....-.:x.xx:x:.....:-:....xx...x.........:::.x.:xx........................x.. 43M1I15M1I56M 79/114 69.3% 116/94230402 0.0% 2/114 1.8% -5387272 -88843130 +10551 chr4 + 190214555 1407894 1407893 1408285 392 GTCCCCGGAGCCTGTTCCGCGCGCAGGGC--GGTCCTTTGCAATTACCGCGGGCAATGATCCTTT-GGAAGCAGAAATTAAAAGTTGGGAGAAATAAT-GGTGGACCGATCGGC-TGTAATTTGGGCCAAGCTCGGACACGCTGAGCCC--CAGGGAGCCTGGAACTGGTTGGGCGGGGCGGGGGGGGGGCGCAGGGCTTCCCGTCCCTCTTCCCCTCCCCTTCCCCTCCCCTTCCCCTCCCCCGCCCTCCCCGCTGCTGGTCCATCCCGAGATTCTAATCAGGT-CCACAGCACCGTGTCC-TTCCTTGCCAGGACTTGATTATTCTTTATCTTTAACTTATAAATCACCTCTGGG---GAAGGAGGGTGGGTAATCTCCCATCGCAGGGAGGCAATTATCTC chr4 - 94230402 6794411 6794410 6794771 87435632 87435631 87435992 361 GTCTCCGTTGCTGGTGACACATACAAGGACAGGTCCTTTGCAATTACCGCGGGCAATGATCCTTTAGAAAGCAGAAATTAAAAGTTGGGAGAAATAATGGGTAAAACAATCAGCTTGTAATTTTGGTAGGGCTTGGACATGATTAGTCCATCAGCGGG-CTGGGCCCAGGGGAGTCCCGCTGAGCTGGAGCCCACAGCAGCCC--------------------CCGCTCATATATTATACACCAGCCCT--------------------GAGATTTTAATCAGACATCACAACA--GTGTCCTTTCCCTTTTATGACTTTATTACGCTTTATCTTTAAATTATAAATCACCTCCTGGCTTGAAATGCTATGTATAATCTGTGATCGTGTGTAGGTAATTACCTC ...:...xx..:x..xx.:.:::..:..x--..................................-.:..............................-...::.x.:...:..-........x..:x::...:.....:.x.x..:..--...x.:.-....:x.::.xx.:.:xxx..x.:.xx..:..x..x:..xx...--------------------..x...x:x.x::x:x.x..x.....--------------------......:.......::-:....:..--......-....:.x::.x.....x....:x............x..............:x..---...:x:xx:..x:......x:x....::x.x...:.....:... 29M2I34M1I32M1I15M1I34M2I7M1D44M20D26M20D16M1I8M2D6M1I54M3I44M 252/349 72.2% 361/94230402 0.0% 55/349 15.8% -5386517 -88843885 +8242 chr4 + 190214555 1409466 1409465 1409619 154 TCTGGGGCTATAAAGACGTCCTTTCACTCCTAATCACAATTGATTGTCAATTAGACCCCCATTTGTGCAATCTCTGCCCATCTGCCATCTCGGGTTATCT-----CCAAGACACCAGCTTCACTTGCAGGGCCCCAGGTGGGCACTGACAGGTGAAATC chr4 - 94230402 6795433 6795432 6795591 87434812 87434811 87434970 159 TCGAGTGTTATAAAGATGTTCTATTGCTCCTAATCACAATTGATTGTCAATTAGAGCCTCATTTGTGCAATCTCCATCCATCTGCCATCTCTGGTTATCTGTTCACCAGAAAGTTAGCGCTGATTATGGGGCCCTAGATGAGTTGTGACATGTAATATC ..x:.x.:........:..:..x.::.............................x..:...............:::..............x........-----...::.x:::...x:::x..:::......:..:..:.:xx.....x..:.x... 100M5I54M 116/154 75.3% 159/94230402 0.0% 5/154 3.2% -5385967 -88844435 +7708 chr4 + 190214555 1414051 1414050 1414276 226 TAGGGAGGGCGGGTCAGGCCGCACAATGAGCTTAATTGAGGTTAATGCCTCCCGCA--GCTCCGCGATTATTAAATTATCATCATCACGCGCGTGAATCATAATTAGGAGTTTGAGGAACGCTCCTGCGGAAGCCTTGGAG---------AGTGATTCTGGCGCCACC-----GCCTGCTTGGGG--CCGCCCGCAG-GGAGGGAGTCGGGGTGGGCGCGTGTCCGCGGGAGGGAGTCGGGGTGG chr4 - 94230402 6797048 6797047 6797290 87433113 87433112 87433355 243 TGGGGATTCCAGGTTAGGGTA-ATAATGAGCTTAATTGAGGTTAATGCTTCCTGCACAGCTCCTTGATTATTAAATTAATATTATCACACACATGAATCATAATTAGAAGTTTAAATAATGCTCTAGGGGAATCCTCGGAGGATCTATTAAACAATTCCCTTCCCTCTCACCAGCTCGCTTTGAGCTCCGAGGGCAGCGCAGGGGGCAGCGGGAGATGGGTG-CTGCTGGGGGGGGACGGGGCAG .:....xxx.:...:...x::-.:........................:...:...--.....x:.............x:..:.....:.:.:..............:.....:.:x..:....:x.x....x...:....---------.:::....:xx:x..x.:-----..::....x.:.--...xxx....-.x....:.:x.x..x:.::.x...-.:..x..:...:.x.....::. 21M1D34M2I83M9I18M5I12M2I10M1I24M1D22M 160/224 71.4% 243/94230402 0.0% 21/224 9.4% -5382997 -88847405 +31264 chr4 + 190214555 1415601 1415600 1416015 415 TCTCCATTTATTTTCCTCTCTGTTGCCGAAACATATTGAAGGGG-AGAAAAAGGAAACATTAAGATCCACTGTGAGCTGCGCGGA-GGTTTAACGATTTCAAATGAGGCCCGGCTCGGGTGAGGACCTGACAATTCCCCGTCAGGATGGCAGATGACGGCTAAAATTACCCGGAATCAATATTCTCACCGGGTGTCCCGGGCTGATAAGCTCCGCCAAGACAATGTTGACTATTAAAGTCGACAGCTTGAGATATTACACTATTAGTTATGCTATTTTTAATAATCTATAATATTTGGGCTATAATTAATTAATTATACGGGTCAGATAATATCTAGGGCTGGAATGAGGTCTGAAGGACCCATTACGG-TGGTAATGAGAAAGGGGAAATCTAATCTGGGGAC-AGGTGCTGCGAAGG chr4 - 94230402 6797961 6797960 6798379 87432024 87432023 87432442 419 TTTCTATTTATTTTCCTCTCTGTTGCTGAAACATATTGAAGGGGGAGAAAAAGGAAACATTAAGATCAACTGTGAGCCTTGCCGACGGTTTAACGATTTCAAATGAGCTCTGACTCTGGTGAAAATCTGACAATTACCCATCAGGATGGCAGATGATGGTTAAAATTACCAGAAATCAATATTCTCACCGGGTGTCCCAGCCTGATAAGAGAGACCAAGACAATGTTGACTATTAAAGTCGACAGCTTGAGATATTACACTATTAGTTATGCTATTTTTAATAATCTATAATATTTGGGCTATAATTAATTAATTATACGGGTCAGATAATATCTGGGGCTGGAATGAGGTCTGAAGGGTCTATTAAGGTTGGTAATGAGAAAGGAGAAATCTAATCTAAGGACGAGGAGCCGTGAAGG .:..:.....................:.................-......................x.........:x:..x..-.....................x:.:.:...x.....::.:.........x...:................:..:..........x.:.........................:.x........xxxx:.........................................................................................................................:......................::.:....x..-...............:............::....-...x..:.:..... 44M1I40M1I283M1I34M1I14M 375/415 90.4% 419/94230402 0.0% 4/415 1.0% -5382360 -88848042 +3046 chr4 + 190214555 1425693 1425692 1425777 85 TTTGTGCCCTCTTCAACTTCTTTTTCTTTTCTTTCATTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTCAGACAAATTATCTCTCT chr4 - 94230402 62442852 62442851 62442936 31787467 31787466 31787551 85 TTTGTTTCCACCTTAACTTTTTTTTATTCTATTTCATTTTATCAATTCAGGTTGTTTTGCTTTCTGACAGGAAAAATATCTTACT .....x:..x.:.:.....:.....x..:.x.........x..xx..:xxx..x....x:...:.xx...:x...x.....:x.. 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% -61017159 -33213243 +14986 chr4 + 190214555 1459469 1459468 1459669 201 ACCCACACTCACGACCATTGTTAATTAAGACTGTCTGCATTATAGGGCTAATTAACAATTAGCATAAACATAATTAGCCAGCGCTGACATTTAACTCATTACATTGTTTAAATAATTTTCGGAAATTGCCC-CAGCGGCATTCTGTCAGCTCGCAATAAAGGCGCCACTTTGTCATGTAAATTAAATGACATTTGTGTTGTT chr4 - 94230402 6809882 6809881 6810083 87420320 87420319 87420521 202 ACACACACACATAACTATTGTTAATTAAGACTGTCTCCATTATGGGGCTAATTAACAATTAGCATAAACATAATTAGCTAATGCTGACATTTAACTCGTTACATTGTTTAAATAATTTTCAGAAATTGCCCTTAGTGGCATTCTGTCATACTGAAATAATGGCAGCACTTTGTCATGTAAATTAAATGACATTTGTGTTGTT ..x.....x..::..:....................x......:..................................:.::...............:......................:..........-:..:............xx::.x.....x...:x..................................... 131M1I70M 179/201 89.1% 202/94230402 0.0% 1/201 0.5% -5350413 -88879989 +24279 chr4 + 190214555 1461606 1461605 1462144 539 AGAATGATGATCAGAGCCTCAGATGAAGTCTGAAACTCCAGACGTGGCGGCCCACCACCCCCCTCCTTCCCCGTGCTTCCCAGACAGGGCAGAGTGGCC-CACAGTGCCCGGGACGGCTAAATCAAATGGCCCCGAGAGTTGT--GGGGCCGGTTCTGGCTGTTAAGTGCTTGTCAGCGCCCACAGGCCCTCTCACGACTCTATAAAATTCCCAAGAATTATAGGAGTGCCAGGGTCACATAATTCACTGCACAGTAGATTTCACCTGGCGGCCAGTAATTCATATTTGTGGCGACAATATTGTTTTCCACTTTCTAAGAGTTATCGCCGTGTCTCCCTTCCAGGTCACTATGGATATCAAAAATCAATTTGGAAAGATGGATACTGTCAGGGAATAAAGCATGAAGGCAGAGGCTGCCCT--CTCGCCTCCATCCGTGC--------------------------------TCCTGAACCTTGGCGGGGGGCTCTGATTGCT----TGCCGGGACTTGAC--------TGGGAAATCGCCAGGGATTGTTCGCTTGCAAGGGTCAACTTCTCCCAGGAGGCTTCCCT chr4 - 94230402 6812835 6812834 6813401 87417002 87417001 87417568 567 AGAATTACAATAAAATCAACAAATGAAATCTATAACTTCAGAAATGAATGAATGTCATCTTT-----------TGCTTCAAAAGCAAAATGGACTGGTAACGTTATGCCTACAATGACTAAATCAAATGTCCAAGAGAGTTGTTCAGGACTGATTTTGGCTGTTAAGTGCTTGTCAAAGCTCACAGGCCCTCTCACGACTCTATAAAATTCAAAAGAATTATAGGAGCTCCAGGGTCACATAATTCATTGCACAGTAGATTTAACCTGCCGGCAAGTAATTCATATTTGTGGGAATAATATTGTTTTCCACTTTCTGAGAGTTATCGCTGTGTCTCCCTTCCAGGTCACTACGGATATCAAAAATCAATTTGGAAAGATGGATACTGTCAGAGAATAAAGCATGAAGTCAGTGA-TGCTTTCACTTTTCTTCTTTCTTTCTAAATGGATAGGTTGAGACAGTTATACTTTTGTTCTGAACCTTTGCAGTGTG--CTGATTGCTCTCATATGGACACTTGACACTCAAAATAAAAACTC-----AGTTTGTTCAGTTGTAGAGGTCACTTTTTCGCA--AGTCTTCTCT .....x.::..x.:.x.xx..:.....:...:x....:....x:..:xx.xx:::..:.:::-----------......xx.::..:::::..x...:x-.::x:....::x:.:.:............x..xx.........--:..:.:.:..:....................:x..:..............................xx..............:x..................:..............x.....x....x..................x:.:....................:...........:......................:.......................................:...............x...x.:-...::.--..:x:..:.x.:.x.x.--------------------------------.:.........x..:.x.x.--.........----.::x.:x.......--------.:::..x..-----:.x......:x...:.::.....x:..:..x..--..x....:.. 62M11D26M1I43M2I269M1D6M2I17M32I20M2D9M4I14M8I9M5D33M2D10M 403/518 77.8% 567/94230402 0.0% 70/518 13.5% -5351229 -88879173 +18016 chr4 + 190214555 1466837 1466836 1467249 413 CCTCCA-GGGGCCTGCAAGTTCATTTGCTTGTCTTACACCTGGCAGCCCTGAGCACTGAGGCTTGATGAGGCTAAGGAGAGCTG--GAGGAAGACCCTATTGATTTTAATTACCCAGAAACAGCCCACAGGGACAAA-GGACTTTGGCAGTTTATTTAGCCAG-GCTGCGCTGCGCTATTGTGGAAGGAGAGGTCAAATCAGCCGCCCTCATTATAACTATAATAATAAGGCCAAAACGCTGCTC--GGGGCTGAGGGCCTTTTTTTTTTAAA----GCAATAACCT-CACTGCCCCACCCCCTCACGCCCCTCTTCAGCAGGCTTGAACAACCAGGAGCAATTACATGCTGTCGATATTAATTCAATTAAATCCAGGTTATTTATTGGGTATTATGGAAAAGGATTCTCTGGCCTTACAGAGAT chr4 - 94230402 6828913 6828912 6829321 87401082 87401081 87401490 409 CCTCCACAAGGACTGTGAGTTCATTTGTTTGTTTTACAT-TGCCTGCTCAGAACACTGTAGCTCTATGAGGTTAAAGAGATCCTCCGAGAAAGATCCTATTGATTTTAATTACCGAGAAACAGCCCACAGGGACAAAAGGACTTTGGCTGTTTATTTAGCCATCGCTGTGCTGCAGTATTGTGTAAGGAGAGATTAAATCAGTTGCCCTCATTATTACAATAATAATAAGGCAGAAAAGGTGCTTCAGGGCCCGAGGA---TTTTTTTTTAAAAGAGGCAATAACCTCCACCACTCCTCCCACTAA------TAAAAGGCAGACTTGAGGAACAAGGAACAATTACTATTAGTCAATATTAATTCAATTATGCTCCTGTTATTTA-----TATCA-GGAGAAGGATTGTTTAATATTTTAGAAAT ......-::..x...::..........:....:.....:-..x.x..:.x..:.....x:...:x......:...:....x.:x--...:....:...................x......................-..........x.............x-....:.....:x.......x........:.:.......::...........x..x.............x:...x.x....:--...x.:....:---............----..........-...::.:..x...x..x.------.xxxx:....:.....:x...x....:.......xxx:x...:...............x:::.xx........-----...:.-...:.......x.:.:::x..x:...:.. 6M1I32M1D44M2I51M1I25M1I81M2I11M3D12M4I10M1I18M6D73M5D5M1D29M 313/397 78.8% 409/94230402 0.0% 28/397 7.1% -5362076 -88868326 +7387 chr4 + 190214555 1470251 1470250 1470671 421 GACACCGTGTCTAACCGGCCAAGATTGACCTGTTTGGGGC-TCCTCACTGCAGCTGAGCGATTTGATCTGAGACCCAGACAGCAGTC-AGGGCAGTAATTGGATGTT-ATGAGATCGGAGG---GCCACTCTCCGAGGAGGGGGCAGCTGAGC------GGCCGTGGGCAGCTGGAGGAGGGGGCTGCGG-------CTGGCAGTGGGGGTGGGGCAGCCCCTGTCCGCTGGAGATAAGC-------------------CCCTCATCTTCAGCCCC---------TAATCTCCTGCTGGGGTCATGGACAG---------AGCCCGAGGCAAGAT---GGAATGAATATGGCCA--CTGTCCAGCCAC---TGCCTGGCACTGCTGCC-----CCGAGGG----TGCTGTACAATTAGTTTTAAATATCAATTTCACGGCTGCTCAGGGGAGAGAACA---------AGCAGGCAGGCAGGCTTCACCCAAAGCAAACCAGGT chr4 - 94230402 6833062 6833061 6833544 87396859 87396858 87397341 483 GATACCATGTCTAACTGAATGGAATTGACCCGTTTAAGGCCTCTTCACTCCAACTAAATTATTTGATCATAGTCACAGACATCTGTTTGGGGCAGTAATTGGTTGTTTATAAGAGCAGAGGAGAGCCACCAGCAGCAACGGTGGCAGCAAGACAATAAAGGCAAGGGACA--TGCATGGAGGGCATGTAGACATGTCCTGACAG-------------ACCACTGTCTGCTTGAGATAAGCAATGCAGATTAGTTATATGCACTCTATCTCACCACTGGGGCCTAATAATCCCCTTTAGCACTCATTCACAGTTATGTAGCAGACAGAAAACTAATACAGGGGAGAATCTGGTCCTCCTGCCTTGCCACAAATCTCAGGCACAGTTTCTGGAATCTGCAGGATTTTACCGTACAATTAGTTTTAAATGTCAATTTCATGGCAGCTCATGAGATGGAAAATAGAAGAATAGCAGGTAAAGA-----TACCCATTGCAAACTAGAT ..:...:........:.:x::::.......:....::...-..:.....x..:..:.::x........xx..x.x......x.x..:-:.............x....-..:...x.:....---.....:xx.x.x::x..x......x:::.------...x:x..:..--..x.x.::...xx..::.-------...:...-------------:..x.....:...x.........-------------------.x...xx::...x.x.:---------.....:...x:x.x:x....xx....---------..x.x..::xxx:..---..::x....x...:.x--...:.:x.....---.x:.x.....x.:.x.:-----.:.x:..----.:.:..................:.........:...x.....x.:..x:...x.---------......:.::x.-----:.....xx......:..:. 40M1I46M1I19M1I13M3I29M6I11M2D18M7I7M13D23M19I17M9I26M9I15M3I16M2I12M3I17M5I7M4I54M9I12M5D19M 277/401 69.1% 483/94230402 0.0% 102/401 25.4% -5362811 -88867591 +11143 chr4 + 190214555 1471964 1471963 1472193 230 GGCGACCCGGGGTCTGCGCGGCTCTCACCCGGTGGCGCGCCGCAGCCGCAGGCAATTTATCTCCGTCTCCCCGCTCTTAAAACACTTTTATCAAAATTGGCGGTCACACCGCGCTGAACCGTGGTGGCCTCAATCTTAAACGCCGCGCTGCAGATTTTAATTTGGGGAAGATTAATGCGCTCGC-GGCGTCGGCGGCGCCGC-GCCCGTTATCGCGCCTGACGGGTGTCAGC chr4 - 94230402 6840691 6840690 6840921 87389482 87389481 87389712 231 GGCAACCAATAGACTGAACA-CTTACCCTCGCTGCTGTTGTGTAAGCATGGGCAATTTATCTAAGTCTCACCTCTCTTAAAACACTTTTATCAAAATTGGCGGTCAAACAGCACTGAACCATGGTGGCCTCAATCTTAAATGCTGCGGTGCAGATTTTAATTTGGGAAAGATTAATGCACTCTCAAGTGTTAATGCCACAGCTTTCTGTTATCTACATTGACGGGTGTCAGC ...:...x:x:.x...x:.:-..:x.x.:..x..x:.:xx:.:.:x.:::............xx.....x..x.................................x..x..:.......:...................:..:...x..................:...........:...x.-:.:..::::.x.:.x..-x:.:......xxxx:.............. 20M1D163M1I17M1I29M 172/229 75.1% 231/94230402 0.0% 3/229 1.3% -5368727 -88861675 +21676 chr4 + 190214555 1478553 1478552 1478843 291 GGAGTTACCAAGTGTGGCAGAATCAGGCTCAGTGAAATGAATTCGGCATCTTTCAGGGAACAGAATCATTGAGCTTACAGACTAAATTTAACAGCCTAATAGAAATATGCAGGTGAAGGTACAATTAATTTTAATTACTAGACTATACATTGTTGGTTGCACAGCCATGAGTAAAATTAAAATGGCAATCACAATTAGAAAATTGCAACCTCATTGTGCAACAAATTAGTCACAAATTAAAAGTGC-GGGGCCATTATGCCTTT-CCTTATTGCTTTAGCTCCGTTCCTGCTC chr4 - 94230402 6844097 6844096 6844389 87386014 87386013 87386306 293 GGAATTACAGAGTGTAACATAATTGGGCGCACTGAAATGAATTCAGCATCTCTCAGAGAACAAAATCATTGAGCCTACCGACTAAATTTAACAGCCTAATAGAAATATGCAGGTGAAGGTACAATTAATTTTAATTACTAGACTATACATTGTTAGTTGCACAGCCATGAGTAAAATTAAAATGGCAATCACAATTAGAAAATTGCAACCTCATTGTGCAACAAATTAGTCACAAATTAAAAGTCCAGGAACTATTATACATCCACCTTATTGCTTTATGACCGTTATTGCCC ...:....x:.....::..x...::...x..x............:......:....:.....:...........:...x...........................................................................:.........................................................................................x.-..::.:.....:.x.::-.............xxx.....x:...:. 246M1I17M1I28M 260/291 89.3% 293/94230402 0.0% 2/291 0.7% -5365544 -88864858 +23068 chr4 + 190214555 1490316 1490315 1491056 741 CCGCCTCCCGCCTCCCGGAGCCCCGGCCCCCACCCCGGCACACACACAACTATTTAATTTTGCTCTGGCAAGGAATAATAGAGTCCTGTGTATCTATTACAGATGCGGGGAGATTGGGCC-GCCACAGGCTGCA-CAGCACATTCAGAGGCCTCACAAAGCCGGCTGCAATCGACTCGGCCTGCCATTATCCATTCAGCGGGCGTAATGAATGA-GCGGGCGCAGGCTGCCATATACCACCCGGCCCAGATAACGGCTGAAAGGAGAAAATTAAATTTTGCTTTTGTTGAAACATTATGATTTATGTATTTGTAATGTAGGCTGTGGTGGGCGACTG--------------------GGGGAAGCCTGCTT------CCTCAGGGTCACTGATGGC-CCGCCGGCCACT--AAGCGCTCAGCCCAC--TCCTCTGTGGGCAG------------------GAACAACTCCC----------------------------------------------------------------------------CCACCTG--CTCATCCGCAGGAGG---AGCCGGGGGCTGGCACACGGACCCCGGGCAGGCGCGGCCGGCCCCCTCTCCCAGGACGCTGGGCTTGGCTCTCGGAGCAGGC-------------------------------------AGGGGGCGG-----------------------CTTCTGTGTG---GCTTGGACCCAGGACCTGGCATTCTGATCACC----CCGTGCCCTGTCTGGACCTGTAAAAATAATTAACTTCTCCTGGC-TGGCCCTGGAGAGACAGACACGTGAGAACATC-CCCTGTAATTTATAGCCTAGCGGTCCTGTCCCTTAATGCAGCAATCA-----GCGCGGGCTTATCACGTTGTGGAAGGTAATAAACTTGCTTCCTC chr4 - 94230402 6852596 6852595 6853535 87376868 87376867 87377807 940 ccccccccccccccccagccctcttctccctgcctcccccTACACACAACTATTTAATTTTGCTCTGGCATGAAATAATAGAGTGCTGTGTATCTATTACAGATGTAAAGAGATTTAGTCTGCTACAGGTTTCAGTAGCACATTCAAAGCCCTAACAAAGCTGGGTATAATAGACTCTCCCTGCCATTATCCATTCAGCAAGTGTAATAAATGACTCGGCCGCAGCCTGCCATATACCACCCGGCCCAGATAACAGCTGAAAGGAGAAAATTAAATTTTGCTTTTGTTGAAACATTATGATTTATGTATTTGTAATATAGGCTGCGGTGGGCAATTGGaaaaaaaaaaaaaaaaaaaggaaaaGATTGCTGAATATACTTCAGGGTTACTGATTGTACCACAGGCCACTTAGAGTGCTCGGAATGCTGTTCTCTCTGTGCTGCTTAATAATAATAAAATCACACAGATTCCTATTAACCTTTTTGCTCGTGGTGattttatttatatatttatttGTTTGTTTTTATTTCCGAGTCTCGAGCTTTGGCCATTTACTCTCAGCCTCATGAAAAATAACAGAGTGATGGTTTATGGAGACAAGGCACGAAGTAC---CTAAGTGTGTAAAAATGATGGATGTAGGTCAAAAAACCtatatatcatttttagtatttttataataattttctttaaatGGGGTGGTTCCCCCCTTCGCCTCTTTTCCACTGCTGTCTTTACGCTTG-----ATGACAAGATATTCTGATATCCTCATCCTTGCAATATCTAGACCTATAACAATAATTAACTTCTCCCACCTTAGAAATATAGAGACAGAAACAGGAGTGCTTCACCCTGTAATTTATAATATAGCAGCACCGTCCCTTAATGTTGTAATCAGGCCTGCAAAGTCTTATCGTGTTGTAGAATATAATGAACTTACTTATTC ..x..:...x..:...:.xx.:.:xx:...::..:.xx.x:.............................x.:...........x....................::::......x:.:.-..:.....:.x..-:..........:..x...x.......:..x.::...x.....xx....................::.:.....:.....-x...x.....x............................:.............................................................:.......:.......:.:..--------------------..::...x:....x------.:.......:......x.:-..:.x.......--:..:....:.xx::.--.:....x..x..x.------------------:x...:x.:..----------------------------------------------------------------------------...::.:--....x..x..x..::---.:.x.:.x.x...:x:.:...xx.x:....x.x:xx:.---.:xxx.x.x:x.::.:.x...::x.:.x..xx::.:.xx::-------------------------------------.x....:..-----------------------..x....x.x---.....-----.x...xx.::........xx..----..x...xx.:...:.....:...x................::x.-.:.xxx.:x.........x..:x...x:.x..-..............::x....:.:x.:...........:x.:.....-----..:x:.x......::.....:...x:....:.....:...x:.. 120M1I13M1I79M1I122M20I14M6I19M1I12M2I15M2I14M18I11M76I7M2I15M3I38M3D41M37I9M23I10M3I5M5D22M4I44M1I32M1I47M5I44M 541/733 73.8% 940/94230402 0.0% 215/733 29.3% -5362280 -88868122 +13878 chr4 + 190214555 1502227 1502226 1502434 208 AGGCTATTTAAATGCTCCGTTGGAGAGGGATTAAAGTTTACGCAAGGTCACTGAGGATGTGATAATTATAATCACAGGTTTTTGGCTCCACAATGACAGCCATTTGTTATTTCCGCTCGGGCGGCTCCCGCGGCCCAGAGCTGGTGACAAGCGTGGACTGATTTAGTGGCCAGAGCCCATGCCCCTCCCCTCCCACTGCAGTCCCAGC chr4 - 94230402 6879007 6879006 6879203 87351200 87351199 87351396 197 AGGCTATTTAAATGCTCCATTGGAGAGGGATTAAAGTTTATGCAAGGTCACTGGGGATGTGATAATTATAATCACAGGTTTTTGGCTCCACAATGACAGCCATTTGTTATTTTCGCTCGAGTAATTCCTGCAGCTTGGAGCTGTTGACAAGCGTGCACTGATTTACTGGC-----------CCCCCCAGGTCCCAAGGCAGTGTCCGC ..................:.....................:............:..........................................................:......:.::::...:..:..:::......x...........x.........x....-----------....:.xxx.....xx.....x:.x.. 170M11D27M 171/197 86.8% 197/94230402 0.0% 11/197 5.6% -5376780 -88853622 +4937 chr4 + 190214555 1512583 1512582 1512715 133 CTGGCCCCGCGGTTAATTGAAATAACCGGGTCAATACACG------GCCGCCGGGACCCAGCCCCATTTGATCTCTCTCCTGGGCAGATTAATTAAGTGTTATCAATTAGCGGCCCTGGGTAAAGGGCCACACTGTCAG chr4 - 94230402 6885198 6885197 6885335 87345068 87345067 87345205 138 CTGGTCAGACACGTAATTGGAATAACAAAGTCAATATATGTTGCTGGTTGTGGGACACAATCTTCATTTGATCTCTCACACGG-CAGATTAATTAAGTGTTATCAATTAATGGCCTGGTAAAAGTGAACACCCTGTTAG ....:.xx:.:xx......:......x::.......:.:.------.::.:x..:xx.x.x.::.............x.x:..-.........................::....:x.x:x..:x.:x...x....:.. 40M6I37M1D55M 92/132 69.7% 138/94230402 0.0% 7/132 5.3% -5372615 -88857787 +19036 chr4 + 190214555 1519711 1519710 1520000 290 ACAGATATATTAATTATATTTCTGCCCCTTAATGGGCTGCTTACTTTATGATGTGGGGACACAAAAGTAAATTTTAAAATCAATTATACAATTACATATGTAGCAATAACAGAGGACACAGCTAATCTTCACCGGGTCAGGACTGCAACCTTCCAATAATGCAGGTTTCATTAGGGGAAGGGCTGTTATTGCCAAGAATTACAGAAATAATGGGAGAGGGTGTATTCAGCGAGAAGTTAACAAATGAGGCTGCTCTGGAGATAAGACGCAGAGCCGGCTGCCGGCTAGAG chr4 - 94230402 6895179 6895178 6895464 87334939 87334938 87335224 286 ATAGATATATTAATTATACTTCTCCCTCTTAATGGGCTGCTCACTTTATGGTTTGGGGACACAAAAGTAAATTTTAAAATCAATTATACAATTACATATGTAGCAATAAGAGAGCACAGAGCTAATCGTCTTTGGGTCAGAACTATAACCTTCTCATAATGCAGGTTTCATTAGGGTAAGGTCTATTATTGCACAGAATTACAGAAATAATGGAAGTGGGTGTATTCAGCAAGGAA-TAACAAATGAGGGTCTTTCCTAGATAAGA---GAAGCTGTTTGCTGGCTGGAG .:................:....x..:..............:........:.x........................................................x....x...x........x..x::.......:...::.......:x.....................x....x..:.......xx...................:..x.............:..:.:-............x.x:.::xx........---::...:.x:...:....:... 236M1D29M3D21M 243/286 85.0% 286/94230402 0.0% 4/286 1.4% -5375468 -88854934 +21727 chr4 + 190214555 1521315 1521314 1521781 467 AGCCGACGGCTCCGGCCTCTCTTTCCTCG------CGCCGGCAAATAGACTCTGATAAGGGGATCTTTGTAATTACACGGAGCTACACTGGTCAATTCTGACTTTTAAATACCGCAGGGCC-GAGAAAGGGAAGAAAGCGCGAACACATGTTCCCGGCGGCCGCC----GCGGTGCCTTT-----------------------GAATCCCGCCCCCGCCGGGGCCCCGTGGCCCGGCCGC-----TCTTTGTGAAGCGCTGTCGCTCCATC--TCGGCGCGAGATCATTTCCAAATTAAATTTTATGGTCCATTACTTA-TCGCTCCGACACTGGTCTAATGGAATCTTAAATGGAACTGACTTGATCTGCGTGGGGCTGGCCTCTCAGTTAAGATGTTATTTAGTTCTAATTATCAGATAATGAACTCGGGAAATTTAATTTTTAATATTTGTATGTCAAAAGTCCATTGTGTTTTGGTGAGAGACTTTAAATTAAAAGTTAACGCGG chr4 - 94230402 6897953 6897952 6898458 87331945 87331944 87332450 506 AGCCAATGGATTAGGGGACCCTTTCTTTAGGATGACTTCAGCAAATACGCTAAGATAAGGAAATCTTTGTAATTACATGGAGCTACACTGGTCAATTCTGACTTTTAAATACCAAGGAGCTAGAGAAAAGGAAAAAAACCT--ACATATGTTATTCTGTGCTATATTAAGTAATTCCTTTCTAATTCTACACAATCAATAGAAGAACATCATGCCAAATGAAAAGATGAGGGCTGCCTACATGTCCTTTTGTGAC-TGGTATCATTCCATCATTTTTGGTAATATCATTTCCAAATTAAATTTTATGGTCCATTACATACTAGCTCAAACACTTTTCTAATGGAATCTTAAATGGAACTGACTTGCTTTGCGTGGGGTTTGTCTCTCAGTTAAGATGTTATTTAGTTCTAATTATCAGATAATGAACTCAGGaaatttaatttttaatatttatatGTCAAAAGTCCATTGTACTTTGGTTAAAGGCTTTAAATTAAAAATTAACATGG ....:.:..x.:x..xxx.:.....:.::------.x:.:.......x:..xx.......::...............:...................................:x:.:..:-......:....:...:.x:--...:.....x::xxxx..:::x----.:::.x.....-----------------------...:x:.::x..x:x:.:::xxx:.x..x.:.x.::.-----::.......x-:.x.:..::......--.:xxx.::.x.................................x..-.x....x:.....xx..............................x.:.........:.x.:...............................................:......................:...................::......x.:..:.............:.....::.. 29M6I86M1I19M2D22M4I11M23I37M5I10M1D15M2I46M1I189M 357/464 76.9% 506/94230402 0.0% 45/464 9.7% -5376638 -88853764 +9464 chr4 + 190214555 1534063 1534062 1534251 189 GGGGATTTATTTCTGAATTAAACAC------TCCCAGCCCCAACGGAAGCCTATTCTTTTTCACAATCAGCTTTCTTCCCA-GTTGTAAACA--CTCTTTCTAAAACTTGTGCATGATTTTAATTACAGATAAGTTTCTCTTTAAAGGCCG-GGCATTCATGCCTGGGTTGCTAAGCTGAATTCGATACATCTCTACGT chr4 - 94230402 6917404 6917403 6917592 87312811 87312810 87312999 189 GGAGATTTAAGTCAGAATTAAGCACATGAACTACCAGGCTAAA----------TTCATTTTAAAAATCAGCTTTCTCTCTACGTACTAAACAAATTCCCACTAAAACTTGTGCATGATTTTAATTACAGATAAGTTTCTCTTTAAAGGCCACAGCATTCATGCTCAGGTTGCTAAGCTGAATTCAATACATCTATATGT ..:......xx..x.......:...------.x....x.:x..----------...x....x.x............::.:.-..xx......--:..::x..................................................:-:..........:::..................:........x..:.. 25M6I12M10D28M1I10M2I57M1I47M 150/179 83.8% 189/94230402 0.0% 20/179 11.2% -5383341 -88847061 +6834 chr4 + 190214555 1535917 1535916 1536083 167 CTCTAGCGTCCATGTGATTTTTCAGTGGTTAATGAAACTGCCAAGGCCCGGCTAT--GTTGCA-CGACTTCGCC-ATCATAACTTTAAATCCCATTATGATCACCTCATTTTACAACATGCTTTGGCCCTGGGATCAATATATCAAGAGGGCCCAGCGCCGGTTACGATCC chr4 - 94230402 6921769 6921768 6921939 87308464 87308463 87308634 171 CTACAGTAGCTATGTGATTTTTCACTAGTAAATGAAAATGCCAGGAACTTACTATATGTGGCTTCAGCTTTGCCTGTAATAACTTTAAATCTCATTATCATCATCTCATTTTACAGCATCCTTTCGTCCTAAGATGAATATATCCTGAGAATAGCATGCCAGTTACTCTCC ..x:..::x.:.............x.:..x.......x.....:.:x.:x:....--..x..x-.::...:...-:.x.............:......x....:...........:...x....x.:...::...x........xx...:::xxx::...:.....xx... 55M2I6M1I10M1I96M 121/167 72.5% 171/94230402 0.0% 4/167 2.4% -5385852 -88844550 +25072 chr4 + 190214555 1539426 1539425 1540129 704 CCCCCAGCTGCCGTCTTCAGTGATTTGGAAGTGTAGAAAATGGGATTATCCAGGAACAGATGTGCACAGAGTGGGTGAAATGGAAAGCCTG-----CCCGCTGCGCCTGCCTTTGATTACCTCTGACGGCCAC----------GCTGTCCACGCCCCCCCAGCACCCA------GCTAAATTCAGCCC---------------CAGCCCCGCCAGCCAGCGCCTCATTGAAATTGAATTGATACTTTGTGAACTTCATTTGTGAATAATGTGATCTGACAGGGACAAATGTGACGGGGAATTGTTTTCAAACCTCCTCCAAATGGAACTTATTATTGGGTAAATACAGATTCCTTTG----------TCTCCTTCCACCCTG-GCGTCCTCG-GGCCTGAATATGTATCAAC--CCCGGAGGTAACTGAATTGATGATGCAGAGGGTGGGGGCCAG------------------------GGTGGGGA--------------------CCCTCCCCAGACTGCAGGTCC------------------TCAGCGG----------GCGGCAGCCG-----TGGTGGCCCTAG--GAGGCCACCCTGCCC------GAGCACCCGCT----------TGGCCCTGC---------GGCCGCCGTCAGGCCTCAGATGTCTTACATATTAATTTCCCGCTGCAGAACATTTGCCGAGC-GCAGCTCAAACCCAGTTAGCTGGATTGATGAAGGTGGCAAAAGGATACGACACACGCTGATTCCACCTTTTCAGCTTCGATTAGCTCCGGCCGGGAG----TCTGTCCCCGTCAGAGCTCCATCACGCGGCCGGCGGAGAACTGGGG chr4 - 94230402 6926313 6926312 6927151 87303252 87303251 87304090 839 CTCCAAACTGCCATCATCAGTGATTTGGAAGTGTAGAAAATAGTATTATAAGGGAACAGATGCGAACAAAAGGGGTGAAATTGGATGTATTAGTATTCAGC--CGTCTGCTTTTGATTACCTCTGACTGGAAAATATTTGGAAGCCACCAGGGTCCCCTCAAGTGTTATGATTTGGTAAATTCAGCCCTCGTGTGTTGGGATTCGGGCTC-----------CCTTATTGAAATTGAATTGATATTTTGTAAACTTCATTTGTGAATAATGTGATCTGACAGGGACAAATGCGAGGGAGAATTGTTTTCAAACCTTCTCCAAATGAAACTTATTATTGGGTAAATACGGATTTCTTTGTCTCTTTTCCTCTCTTTCTATCCTGAGCATCTTCATGGCCTGAATATGTATCAACTTTTCCAAGGTAATTGAATTGATTCAATCATGTGTGGGCAACAGAAATGGGCAATAGAATATCTTTCTGATGGGAAAAAATTGAAAAGTAGAGGGTTTCTACTCAGG-TGAAGGGCTGAGAGGGTCACAGTGCTATCAGAGGAGAGAGACACGCAGAAGCTTCTTTCTGATTATCTCAGCTTTGGCCATTCTCTCCCTCAATAATCGCCCTCTGATATAATGCTGGCTTTCCAATTTTGCTGGCCAGCACTAGGCCTCAGATGTGTTACATATTAATTTCCCTTTGCAGAAAATTTGCCAAGCTTTAGCTCAAATTCAGTTAGTCGGATTGATGAAAGTGGCAAAAGGATACGACATTTACTGATTCTCTCTTTTCACCTTTGATTAGCTCAACCTGTGAATTATTCTTGCCCTGTCAGTGTGCCATTA----------AAAGAGCTGGGG .:..x.:.....:..x.........................:.x.....xx:..........:.x...:.:x.........x.:.x.:x.x-----:.x..--..:....:................x.xx.x----------..:::.x:x.:....:..:xxx::.------.x............---------------.:.x.:.-----------...:..................:.....:........................................:..x..:.................:.........:.....................:....:.....----------....:...:.:....-..:..:..:-...................--::.x:......:.........xxx::x:x.x.....x:x...------------------------.:....:.--------------------::..x.:...:-..x...x.:------------------....x..----------..:.x...:x-----..:.x::.::..--xx.....::..x:..------:.x.:...x..----------....::.x.---------....:x.:::.............x.................x:.......x.......:...-x:........::.......::...........:...................:x::.......:x:.......x...:.........x:x.:.x..:----...xx...:.....x.:x....:.----------::...:...... 91M5I5M2D30M10I25M6I14M15I7M11D136M10I15M1I9M1I19M2I42M24I8M20I11M1D9M18I7M10I10M5I12M2I15M6I11M10I9M9I62M1I97M4I24M10D12M 524/680 77.1% 839/94230402 0.0% 183/680 26.9% -5386887 -88843515 +5789 chr4 + 190214555 1545087 1545086 1545209 123 TTCTTCACTGAAGCAC-CAAGTCCTAGGAATGGTTCCCTGAGGCCACACCTATAATTTT-ATTGTTGTGTGAATATTCTGTTTGAACGGGAGATTACAATTTTACTTCCTGTTCAGTAAACATCC chr4 - 94230402 6932763 6932762 6932887 87297516 87297515 87297640 125 TTCCTTTCTGATGCATTCAGGCACTGTGAATTGTTCCCTAAAGCCAAATCTATACTTTTTATTGTTATGTGAATATTCTGCTCATACTAGATATTATACTTATACTTCCCATTCAATAAATATCC ...:.:x....x...:-..:.:x..:x....x.......:.:....x.:.....x....-......:.............:.::x..x:..x....:.x..x.......::....:....:.... 16M1I42M1I65M 92/123 74.8% 125/94230402 0.0% 2/123 1.6% -5387676 -88842726 +7485 chr4 + 190214555 1547329 1547328 1547539 211 GCTCTAAAGGG-TGAATGGCACGTTCACACCATCGTCTTTCCTGGAAACGACAGCGCCTGCCATTC-------AGGACATTA-----------CCCAGCCCCC-------GGCCTGATAGCCCATGACTCTCCGGTTCATAACACAAAATCACACTTTTCATCAAGAAGCTTGTATTCTCCAGATAATTCAAGAATCCACACAGCAAATCCAGCACAGACTGTTTGCTTCCCAACAC chr4 - 94230402 6933300 6933299 6933536 87296867 87296866 87297103 237 GCTTTAAAGGGGTTAATGAGGTATTTATTCCATTATTGTTATTGGAAATTACAGTGTCTAGAACACTTACACAAGAAGATTAAAGATAGATGCTTTAGACCACTTTCTATAGTCTGATAGACCATTATTTTCTGGTTCATAACACAAAATAGTACTTTTCATCAAGGAGCTCATATTCTCTAGATGATTCAAAAATTCACAGACCAAAACCAATGTGAAGTATTAAGTTCCTAATAC ...:.......-.x....:x:::..:.:x....::.:x..x:......:x....:.:..:xx.:x.-------..:.x....-----------:::..x..x.-------:.:.......x....x.:.:..:.................x::.............:....::.......:....:......:...:....x.x....x...::::::.x.:..x:x....:..:.. 11M1I54M7I9M11I10M7I127M 146/211 69.2% 237/94230402 0.0% 26/211 12.3% -5385971 -88844431 +12036 chr4 + 190214555 1548646 1548645 1548931 286 GTTTCTGGTTTTT---CCATTTATAAAGCAGAGTGAGGTTATAAATCAGAAAA----------------------GTGTTTACAGGAGACACACAGCTGGCAATAACAGCTTTGAGGGGCCACTGCGTCTCTGTGACTATTTCATCTTCCACGCCAACTTAAACATGAGAAAAAAAGGCTTTGCAGCCCAGGGCCCCGCTGCACGGCCCAGCAGATCGAGAGCATTTGCAATAATTCATAGACTTCTCACTTTCATTTTTCTGCCGCCCAGGAATTACATTCCACTATTAAAATGCGCTG---GGACTGCCTGG chr4 - 94230402 6934955 6934954 6935259 87295144 87295143 87295448 305 GTTTTTGTTTTTCTTCCCAATTATG-----GAGGTAGGTTATAAATCAGAAAAAACAAAAACAGCCAAAAAAAAAGTATTTATGGATGATACACATCTGCCAATACCAGTTTCTACTGGCCAGTACCTCTGTGTGACTATTTCATCTGCCATGGTAACTTAAACACAAGAAAAAA-GCCTTTACAGTTCAGGGCACTGCTGCTTGGGCAG--AGATTGAGTGAGTTTGTAATAATTCACAGATCTTTCACTTTCATTTTTCTAGTGCTGAGGAATAGCACTCTGCTATTAAAATG-GCTATGTGGATTGCCTGG ....:..x....:---...x....:-----...xx..................----------------------..:....::.:x..:.....x...x.....x...:..:x.xx.....x.:.x...x................x...:.x:..........::........-.x....:...::......x.:.....x:..x.x:--....:...x.x:....:.........:...::.:................:x:..:x......x:..:..::...........-...:---...:....... 13M3I9M5D23M22I100M1D34M2D83M1D4M3I11M 214/277 77.3% 305/94230402 0.0% 37/277 13.4% -5386309 -88844093 +8990 chr4 + 190214555 1550468 1550467 1550604 137 CTTCATTTCTTCCTTCCCTTATCACCGTTAGCCATTTTCATGGGATAGAGATACAGAGGAGCTC-CCATTACAAAGCGCCATTAAACTGTCGTCTGTGCAACTGTGTGTGAAGAGGCATCGGATAACGGTCAGGGCTG chr4 - 94230402 6941663 6941662 6941800 87288603 87288602 87288740 138 CTTTGTTTTTTCCTTTCCTTATCACCATTAGCCATTTTCACTGGATAGAGATACAAAATAACTAGCCTTTACAGTGAGCCATTAAACTGTCATTTGGGCAACTGTGCATGAAGAGGCATCAGATAACGGTCAGTGCTG ...::...:......:..........:.............:x.............:.:x.:..x-..x.....:x.x..............:.:..x.........::............:............x.... 64M1I73M 114/137 83.2% 138/94230402 0.0% 1/137 0.7% -5391195 -88839207 +31611 chr4 + 190214555 1552882 1552881 1553364 483 GCAGGATCAAAGGCTGTCC--AAGGGCACGGATGCCTCCCCACTCCCACCCGGGTGCT----CACCGACGCGCCCGCTCAGAAATACAATATTTGTAGGGTCTTTTTCATAAAGGTCTTTATGGGTTTGGAAATTTAAACACCACGGAGCCTGAGTTGAATTGGAAAGCAAACGTCTCTAAGCTTGTACATCTTAGAGCAAAAAAATTCAATTAAGTGGGATTTTAGCTGTTTCAATAAAATTGGACTCTCCCTCTTCAAGATAAGAGCTCTGTGGCGTAGAAGC-ACCTTTATGTGCCACGAGTATCCACTTCTCCGAAACGCGTAATCCCGGCTCAGGACACAATGCCCACAACAGGAAATCAATGCATAGTCGAATCAATTTGAAAATATAAAATAAACTAATATATGAGTGGAAAATTGACTTCCTATGGATTAAAAGCAGCACAAATAGTAGAAAAATCTAGCTTTTTAGCAAAAGGAAGCAGGT chr4 - 94230402 6944261 6944260 6944750 87285653 87285652 87286142 490 GCATGATCAAAAGATGTTCTACAAAGTATTGATATTTCACTGCTTCTTACCTTGAGCTTCTCCAGTAATTCACCATATCAGAAATACAATATTTGTAAGTTCTTTTTCATAAAGGTCTTTATGGGTTTGGAAATTTAAACACCGCGAAGCTGAAGTTGAATTGGAAACCAAAAGTCTCTAAGCTTGTACATCTTATAAAAAAAAAATTCAATTAAGTGGGATTTTAGCTGTTTCAATAAAATTGGACTCTCCCTTTTCAAGATAAGGGTCCTATAGAGCTGAGGCAACCTTTATGTGGCAGGAATATCCACTTCCACTAAACGTATAATCCTAGCTCAGGATACAATACACACAACAGGAAATCAATGTATAGCAGAATCAATTTGAAAATATAAAATAAACTAATATATGAGTGGAAAATTGACTTCCTATGGATTAAAAGCAGCACAAATGGTAGAAAAATCTGGCTTTTTAACAGGACGAGGTGGGT ...x.......:.x...:.--x.::.:.:x...:::..x.::..:.:xx..xx.x...----..x::.:x.:..xxx....................:.x...........................................:..:...:x:..............x....x......................x.:x.......................................................:...........:.::..:.:.x.:x..:..-...........x..x..:..........:x.x.....::......::........:.....:.x..................:....:x.............................................................................:............:........:..::.x..:.::... 19M2I37M4I223M1I204M 404/483 83.6% 490/94230402 0.0% 7/483 1.4% -5391379 -88839023 +10012 chr4 + 190214555 1557082 1557081 1557450 369 AAAAGCTCAATTTGTAAACACTTGGTCAATATGAGGTAAAGCCAACAGGATGGATTTGGGACCACATTGGACAACGCCATCGGCTGCACCGGACGCCCAGCAACAGTAGGTAAATTAGGTCATCATTAAATTATCATGAGGAAAAACGCATAATCGGCACCAGCG-CTGGTAGAAAGATTACGGTTATTT---ACAAAAACCATGCTGTTTGCAAATTTGTGCA-----------AAATTATTTGT---------------TCCTAGCAGAGTTTTATAGAGCTATCTGCACATGATCTCCGCC-CGAGATTCCCAGCCCTGCATATTAACTAA-TGTCTGTGGTTTAATTGGAAA--TAGAACAGGCCACATTGTAAATCGCTTTTCTGCCATCTGTCTCTG chr4 - 94230402 6949791 6949790 6950193 87280210 87280209 87280612 403 AGAAACCTAATTTTTAAACATTTGGTAAACATGAATTAATCCTGACATGGTAGATTTTGTGCTGAGTTAAATAATCATACGTACAGTCTATAATGCATTAGGACAATAGGTAAATTAGTCCTTCATTAAAAAATCATGAAGGAAAATGCATAATCTGCAGCAATGCCCAGAGGAAAAATTACAGTCATTTGAAATAAAAACACCATTGTTAGCAAATCTATGGAGGCTGTCTTTCAGGTTGTTTTTCTTTTTGCCTTTTTCCCCCAAAAAGGTGTTACGGATCTTCCTGCATATTGGCTCTATAGTGAGATTTCCAGTTGAATGTATTAATTAAGTACCAGGGATTTAATTGGAAATCTGAGGTAGAAAAAACTGTAAATCTCCTTTCAGTCATTTGTCTCTG .:..:.::.....x......:.....x..:....:x...xx.::...x.:.:.....x.x:.::x:..::.:..:xx:.:xx:.x.:x:xx:.:..x:x:x:...:............x:.x........xx.......:.:....:........x...x..::.-.::.x:....:.....:..:....---.:......xx:::....x......:.:..x.-----------.::..:...x.---------------:..:.:x.::..x...::..x..x:.....:..x:x...:::x-:......:....::xx:::......:...-.::.x.x.:............--.:::::..:xx.x.:........x.:....x.:...:........ 165M1I24M3I31M11I11M15I43M1I29M1I21M2I45M 236/369 64.0% 403/94230402 0.0% 34/369 9.2% -5392709 -88837693 +4200 chr4 + 190214555 1557808 1557807 1557987 180 TGCACAGCCACACACAGGGTTGGGGGCGGCCCTCA-GTGGGCTTGAAGCGGCAACGGGCAGTAG-TGTCTTCAGACCTGA-AAATTAAAGAAGGTGACGG--AGGCCATGTCTCAGCAATGTGCGCACTTCGTGGGCCTTTCTTCAATCGAATTGACCATTAGAGCAAGGAGGGTGAAAAACGAC chr4 - 94230402 6950378 6950377 6950562 87279841 87279840 87280025 185 TACACAAGCACAAATGTTGTGTAAATTGGCCTTTAAGTGGATTTTAAATGGCAGTGCTGGGTAGGTGTTTGCAGGACTGCTGAATAAAAAAAAATAGCTATAGTGCAGTATTTTACAAATGAATACTTTTAATGGGCCTATTTTCAATTGAATTGACTATTAAAACAATGAAGGCAGAAAATGAC .:....:x....x.::xx..xx:::x:....:.:.-....::..x..::....::.xxx:....-...:.x...:x...x-:...x...:..::.::.x:--:x..x:.:.:.:.xx....x:::.x:..x:.......x.:......:........:....:.:...x..:..:::....:... 35M1I28M1I15M1I19M2I83M 109/180 60.6% 185/94230402 0.0% 5/180 2.8% -5392570 -88837832 +3031 chr4 + 190214555 1558545 1558544 1558597 53 AAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAGAAAAAAGGAAAGCAAAGGGA chr4 - 94230402 49250049 49250048 49250101 44980302 44980301 44980354 53 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAA .........:...........:::x.:...........:.:.::x....x.:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -47691504 -46538898 +22226 chr4 + 190214555 1561914 1561913 1562557 644 AGTGTCGATTCTGCGCCACTAACTCATTGATCGCCTT-GCCCGGGTTAATTAATTAATTAGGGGCAGCCATGGAGCACAGTGGGCTGGGGCCAAGGAGGGACCCCAGC---GCCGGGAGCTTTATTAGTACATAAAATGGGTGTTTAAAACACACACGGCCACGAGCGTGCAGTTGAGGCTTTTCATTAAACAAACCTATAACATTACGTGCCTCATTATGTATTTC-GAGACTTCCCCTGCCTTCCGCGCTCCCTCTCCACCTGCCTC-----CCCGCGCACTCCAAGTGCCTATTTGAAATCAATTTCTCTAATAATGGACTTAATGAGCTCATCAATTAGAGCTGCCATAACCGAGTGT---CGTGGGCTCTGCGGTTATCAGTTAAACTCTGGAACTAATTTCCATGCTTCATCTATC----ACGGGGCGCCCGCGACGTGGGGCTGCTGCTCTGGGACGATAGGGAGACCCCAGGCCCTTCC---CGCAGGTCTCGGGGCC---ATCCCT------------GGAAGAGG-------------------------ACAATGAGGACAGAG---TGGCCCACCTGGCCGAGAGCGGCCGAGGCGCGA-------------GGCCGGT---GTCATTAGTGGTAATGGATGGCCGGCGCGGGC---CCAGATAAGACG-TCCTTCCACATGGTCAGCCCCATTA--GGCTGTTCTCGTCTCGCCCC chr4 - 94230402 6956218 6956217 6956936 87273467 87273466 87274185 719 AGTGTCGATTCTGCA----TGACTAATTGATTGCTTCAGCTGGGGTTAATTAATTAATTAGTAGCAGAGCTGCATTAAAG---ATTGGAAGCATTCAGAACTCCCATAATGGACATGAGCTTTATTAGTACATAAAATGAGTGTTTAAAATCCACACAGCAACTAATATGCTCTTGAGGCTTT-CATTAAACAAACCTATAAAATTACTTGCTTCATTATGTATTTTAGTTACTTTCTTCACATTGTACGGTATCTCTTCACCTTTTTCTTTTGCCAGCCAGTTTTAAGTGCCTATTTGAAATCAATTTCTCTAATAATGGGCTTAATGAGCTCATCAATTAAGGCTGCCATAATGGAATGTAACTGTGTGGTTT-CAGTTATCAGTTAAACTCTGGAACTAATTTCCATGCTTCATCTATCAAAAATGATTGGCTAATATTGTTTAGCTTCTGCTTTAGGACGATAGGGAGACCTCAGGCCCTTCCTCACTAATGTCCGAGGGCCTGAATTTCTTCTTGGAGAAACAGAAGGGGAGGGAGGCGAGGCGGGATGGGAAAAACAATGAGCGCGGAGATTTGGGCC-CCTATCTGGACCTGAAGGAAGTGTGATCCTGTATTTCAGTGCCAGCATGGTAATTAGTAGTAATGGATTACATTTTCAGACGTATTAGATAAAATGATCGTTCCACATGAAAAATCCCATTATGAGTTTTTTACCTCTTGCTCC ..............:----.:...x......:..:.:-..:x...................x:....xxx..x.x:.x..---::...::x..xxx..::x:....xx---.x.:x.......................:..........:x.....:..x..x.:::...xx..........-..................x.....x...:.............:-.xx....:.::::.x..x::..x.x:....:.....x::..-----..x..xx::.::...................................:....................::..........:x..:...---:...x.x.:.-.:............................................----.:.:xxx..:x:::x:..xx:...x.....:.:................:...........---.xx.x...:x:.....---..::..------------:....:..-------------------------........x:.:...---...x..-...:x.:.::xx:.:xx..:.:.:..-------------x...:.:---..x......:.........x:.xxx:x.:.:.---::......:.:.-..x.........:xx.::.......--:.:.x..:x.x...:..:.. 15M4D18M1I42M3D25M3I72M1D43M1I41M5I88M3I10M1D46M4I61M3I16M3I6M12I8M25I15M3I6M1D26M13I7M3I32M3I12M1I25M2I20M 470/634 74.1% 719/94230402 0.0% 95/634 15.0% -5394304 -88836098 +13253 chr4 + 190214555 1567995 1567994 1568234 240 CCGGCAGGGACGGGGTTAAGAGCACGGCGCCTCCCAGGCCTCCCTCCTCGTT--CCCTTTGAAATGGCTCCCTGGTTCCAGAATGACTCCG-GCTTCCCCTCTTAATCTGTATTTTACGAGTGAGAAGGTTTGCATTATGCAAATCGTTAGATAGGAACAGGTGACATTTCAGCAAAGAACACGGCAGGCGGC---GGCCTG----CGGCTGCTGATTTAGACATTAGTATTTGTCACCAGGGCGGCGGG chr4 - 94230402 6972406 6972405 6972645 87257758 87257757 87257997 240 CTGGCTACAACAGGGTTAATAGTAA----------AGACTGCACTTTTTTTTATCCGTTTGAAATGGCTCCATGGTTCGAGAATGACTCTTTGCTTCCCCTCTTAATCTGTATTTTACGAGTGAGAAGCTTTGCATTATGCAAATCGTTAGATAGGAACAGGTGACATTTCAGCAAAGAACATGATCAGCGGCCCGGGCCTGGATTGGGCTGCTGATTTATACATTAGTATTTGTCACAAGGATCGCAAG .:...x:x:..:.......x..:.x----------..:.:x.x..::.:x..--..x..............x......x..........:x-....................................x.....................................................:.::x:.....---......----x.............x.................x...::x..::. 25M10D17M2I37M1I101M3I6M4I44M 194/230 84.3% 240/94230402 0.0% 20/230 8.7% -5404411 -88825991 +3085 chr4 + 190214555 1572945 1572944 1572984 40 TATACTCACATGTACACACACACATTCACACACATTCACT chr4 - 94230402 44739703 44739702 44739742 49490661 49490660 49490700 40 TATTCTCACATGTACACACACACATTCTTACACATTCATT ...x.......................x:.........:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -43166758 -51063644 +37709 chr4 + 190214555 1576050 1576049 1576659 610 GAGTCCACCTTAAGTGGGTTTGATCGGCCCGTGCACTGGTGAGAGCATGCTAATATTGGCTCCAATAAAGAGCAAATCAGGGCCCTAGTCGACGCGTCTTATCACACAGTCAGAACTGATGGCTGCAGAAGTCATAAAGATCCCATTTAATCTCGCGCCTATCTATCAC-GCGGCTGCCTTCATCCTCTTTGTGCCGGGGTAATATGTGCTCATTACAAAAGCAAAACAGATCTGGCATGAATAAACGCAGGATGAAGTGCTCACTCGGAAAGTGACAGCATGATCAGTGGCGGCAGTAATCGCAGAGAATC--GCGGGCTAAATTATTCCATAACCGTGATTTGAGGGGACAGCCCAGAGCACCCCACAGCTGCCTGCA-GCACAGCGACGTGTCCTGATAAAACATCCTTCCCAATTTACG-GGGCCGCGCTTGACTAATCTGCCTCCGCGCGCACACTGTCTAATCATGCCATCAGCACCGCGAGAAGGGGCTCAATTGGGACTCCAATGAAAGGAGATTGGAAAACTACCCTCAATTGAAATTACATTTGTAAATGAGGCAGAG-TTTTCTGTTCAGAGTGTGAACGTTACGGTAAATCTGCTCCAGAAAGT chr4 - 94230402 6978552 6978551 6979160 87251243 87251242 87251851 609 GATTCCACCTTAAATGGATTTTATCAGACTGTGCACTAGTAAGCTCATGCTAATATTGGCTCCAATAAAGAACAAATCAGTGCCCAACTCGACTCGTCTTATCGCACAGTCAAAACTGATGGCTGAAGAAGTCATAAAGATCCCATTTAATCTCTCGCCTATCTATCACTGTGAATGTCTTTATCCTCTTTGTGCAGTGGTAATATCTGCTCATTATGAAAGCAAAATAGATCTGGCATGAATAAAAGCGGAATGAAGTGCTCACTTTGATTTTGACAGCATGATCAGTGGAAGCAGTAATCTGTGAGAATCAAAAGGGCTAAATTATTCCATAACAGTAATTTGAGGGAACAGCTCAGAGCA-TACACATCTGCTTTCATATATTGTGACGTGCACTGATAAAACATCCTTCCCAATTTACTCTCTCTGTGCTTGACTAATCTGCAACAGCTCTCACAATGTCTAATCATGCCATCAAAA--AGGAGAAGAAGTTCAATTGAGACTCAAATGAAAGAAGATTGGAAAACTATCCTCAATTGAAATTACATTTGTAAATGAGCCATAGTTTTTCTGTTCAGA----GAGCGTTATGGTAAATCTGCCTGAAGAAGT ..x..........:...:...x...:.x.:.......:..:..xx..........................:........x....x.x.....x.........:........:............x............................x..............-.:.:x..:...:.............x.x........x.........::.........:..................x..:.:..............:x..xxx..................x:.........xxx.......--:x....................x..:.........:.....:.......-:x....x....:.x..-::.:x.:......:x..........................x-xxx.:.:...............xx.x..x.x....x..................:x.--:x......::.:.......:.....x........:..............:.............................x..x..-.............----..:.....:...........::x.::.... 169M1I142M2I49M1D16M1I42M1I57M2D85M1I13M4D30M 509/603 84.4% 609/94230402 0.0% 13/603 2.2% -5402502 -88827900 +20831 chr4 + 190214555 1577493 1577492 1577905 413 AGCAGCGGTGAGGTACCCAGCACCTCCTCAAAGGC---CTTTATGTAAATCAAGTCCTAATTAGGCC--ATCCGGCGTTTGTGTAGAATATCATTTTTTTAATTAC------CAGCCCTGGGCAGGTTCCCCGGCTGCCTGTTGT-GCGCCAATTACCATAAATCCCCCGGTAACAATTAACAATGTTGGAGC-GAGCTGCATGTATTTCCAATGTTATAATTATGCGCGGCGCTCTTGTTAATTGGCCTATCTGACTCTGTACTTTTTATGCCGCTCATCTGCTCATTACCGCGGCCATTTAATTCAATTAGCACCTTAATTAGAGGGACAGCCTTGTCCAATGTCG-GGGCCTTGTCAGGG--AGCCGCCTGATGAGCAGAGACAAACACAGGCTCTGCCGGGACCAGGCAGCCGCA-----GGGCTGCGGG chr4 - 94230402 6984046 6984045 6984472 87245931 87245930 87246357 427 AGCATTATTGCAGCACTCTGCTTTACTTTACAGGCATCTTTTATGTAAATCAAGCGTTAATTATCCTTGCTCTGTATTTTGTGTTGAATATCATTTTTTTAATTACAGGCTTCATCCCAGGTTAAG---CCTGCTTGCCTGTTGTTGAACCAATTATCATAAATTCCCCTGTAACAATTAACAATATTGGTACAGAGCTGCATGTATTTTAAATGTTATAATTATGCTCAGCTCTTTTGTTAATTGGCCTATCTGACTCTTTACTTTTTATGCTGCTCATCTGCTCATTACCGCAGCCATTTAATTCAATTAGCACCTTAATTAGAAGAACAGCCATGTCCAATGTCGTAGGACTTGTCAGAGTACGCGGCTTGATTAGCAAAGACAAACACA--CCATGC--AAATCAGGCTGTAACATTTGGGGGCGGCGGG ....x::x..x:.:..:.x..x::x.:.:.x....---:...............:x:......xx.:--x..:.xxx.......x.....................------..x...x..x:.:.---..:.x:..........-.x:.......:.......:....x...............:....x:.-...............:x................x.:..x..:........................x............:....................:...............................:.:......x............-:..x........:.--x..x..:....x....:...........--.:x...--::.:.....x.:x:..-----....x..... 35M3I29M2I37M6I14M3D16M1I47M1I154M1I14M2I28M2D6M2D16M5I10M 331/406 81.5% 427/94230402 0.0% 28/406 6.9% -5406553 -88823849 +10434 chr4 + 190214555 1578184 1578183 1578321 138 AGGCTAGGTTTTGTTTTGTGCCAGTCTATTGAAATCGCTATTCCCTGCCTATTAATTCTCCTAATTAGAATTAAATGAAGCATGCTAAATTGCTAGATTAACCAATAATTAAGCAGCCACTGCACTAAAACTGAACAC chr4 - 94230402 6985013 6985012 6985150 87245253 87245252 87245390 138 AGTCTCAGTTTTGTTTTGTGCCAGTCTATTTAAATCTTTATTCCCTGCCTATTAATTCTCCTAATTAGAATTAAATGAAGCATGCTAAATTGCTAGATTAACCAATAATTAAGCAGGCAAAGCACTAACGTTTAATAC ..x..x:.......................x.....x:..............................................................................x..xx.......x::.x..:.. 138M 124/138 89.9% 138/94230402 0.0% 0/138 0.0% -5406829 -88823573 +28379 chr4 + 190214555 1579873 1579872 1580240 368 GCCGTAAACTTCCTCCTAACAGCC-GCTCCTGCAGCCGGAAGATATTGACTCGAAGGAGAAACAATGGCAGGAATAAAATAAAAATAAAAAAGTTAATTATCCTTTGTGTTTGTAATTTAATTAAAGATGCAGTAAAGTTTTACTGTTTTTCCAGGTGATGATGTTTAGAGCCCCGAGAAGCTATTTGTGCTGGTGAGATTAAAGTGCATTTTAAAATGTTCCTCCAGTACTTTCACATTTGTTGATAGATTTTTAAATTAAACTTTAAATTGTAATCTAAATTACCTCCAACAATTCATGGTCCCTGTAATGAACTCCCACCGTTCCCGCTGTCATCCGTCGATGATGGAGTGCGAGCCGGGAGCTGC chr4 - 94230402 6987380 6987379 6987747 87242656 87242655 87243023 368 GCTGTAAACTTCTTCATAACATCCTGTTCCTGCAACTTGAAGATATTGACTCTGAAGGGAAACAATGGCATGaataaaataaaaataaaaaagttaattatCCTTTGTGTTTGTAATTTAATTAAAGATGCAGTAAAGTTTTACTGTTTTTCCAGGTGATGATGTTTAGGGCTCTGAAAAGCTATTTGTGCTGGTGAGATTAAAGTGCATTTTAAAATGTTCCCCGAGCACTTTCACATTTGTTGATAGATTTTTAAATTAAACTTTAAATTGTAATCTAAATTACCTCCAACAATTCATGGTCCCTGTAATGAACTCCCACCATTCCTGCTGTCATCCTACTATGATATACTGTAAA-TGGTAACTGC ..:.........:..x.....x..-.:.......:.:x..............x:.:.:............x..................................................................................................:..:.:..:.............................................:.x..:..............................................................................................:....:..........xx.x.....:x.x..::.:-:..x.:.... 24M1I333M1D10M 333/367 90.7% 368/94230402 0.0% 2/367 0.5% -5407507 -88822895 +3062 chr4 + 190214555 1585245 1585244 1585289 45 CTAATAATGTCTCTACTCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 47207630 47207629 47207674 47022729 47022728 47022773 45 CTGACATTCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTT ..:.:.x.x...x:.:............................. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -45622385 -48608017 +3090 chr4 + 190214555 1585254 1585253 1585291 38 TCTCTACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 - 94230402 47207637 47207636 47207674 47022729 47022728 47022766 38 TCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTT .......x:...............:............. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -45622383 -48608019 +3000 chr4 + 190214555 1585257 1585256 1585292 36 CTACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 63778260 63778259 63778295 30452108 30452107 30452143 36 CTGCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTCCT ..:..............................::. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% -62193003 -32037399 +3095 chr4 + 190214555 1585261 1585260 1585296 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -17344651 -76885751 +3166 chr4 + 190214555 1585261 1585260 1585294 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -17344653 -76885749 +35719 chr4 + 190214555 1593436 1593435 1593973 538 TCCCCCCTCGGTAGATCAATAGCTTTGGAAATCTGAAAAGA----------GCCCAAACAAAGAAGTGGGCTTGTAAGTATCCAGCTTGTATCAGCTGATAAATGGTCCCCTCTTTAAGGGACTTATCTCTTTAGGGCTTGCGGGATGAGGGATGGCGTCATTTGTCCTGGACGCTCGTCTGGACCAGCCAGGCCGGATCTATTTAAAAGATAGCGCGATACTGTCGACAGCAATAGACAGGGTAATTGCAGAGCGGCTGCCGGGGTATAAATTACACGGCTCTAAGTGGTGGAGTGGCCGCGGGAGACTGGAGAAATTCCTGACAATTCACTTGTCCCTCTGCCCTGCCGCCAGCTTATCACGGGCCAGCAGAAGACGCGCGCTC-GGGTGAAAAAATTAAGTATTGATCAAATTAACAGTTTTTACTGATCTTTTTAAGGGAGAAAAGGAGTGCAACAATTAAATTTAGAACACAAAGGACGGGGCAGGGTAACTCTTGACCCTGCG-TGGCAAAG-TCTGTGACACCAACAAGCACGAAATACGGTCT chr4 - 94230402 6994847 6994846 6995397 87235006 87235005 87235556 551 TCATCTTCCAGTAGATCAATACCTTTGGAAATCTGAAAAGACTGCCAAAGAACCCAAACAAAGAAGTGAGCTTGTAAGTATCCTGCTTGTATCAGCTGATAAATGGTCCCCTCTTTAAGGAACTTATCTCTTTAGGACTTGCAGTATGAGAAATGGCATCATTTGTACTGTTTGCTTGGCTGGACGACTGAAGCTGGATCCATTTAAAAGATAGTGAGATACTGTCGACAGCAATAGACAGGGTAATTGCAGAGCCACTACTGTGGTATAAATTACATCACTCTAAGTGGTGGAATGGCCTGAAGAGAGCGAAAAAATTTCTGACAATTTACTTGTCCTACTGCCCTTTTGACTGCTTATCACTGCTCAGCAGAAGAAAAGAGCTCTAGGTGAAAAAATTAAGTATTGATCAAATTAACAGTTTTTACTGATCTCTTTAAGAGAAAAAAGGACTGGAACAATTAAATTTAGAACACAAAAGACTAGGCAGGATAACTCTTGACCCCAAGATGGCAAAGCTCTGTGACACCGACAAGCAGAAAATACAATCT ..x:.:::.:...........x...................----------:................:..............x....................................:...............:.....:.x.....::.....:........x...xx:...:.x......x.x:x.:..:.....:.............:.x......................................x:..:.:.x.............:x:..............:.....xx::....x:.:.:.....:.........:........:x.......x::.x.x.........x.x:..........x:x.x....-:..............................................:......:..:.......x..x.......................:...x:......:.............::x.-........-...........:.......x:......::... 41M10I335M1I122M1I8M1I32M 455/538 84.6% 551/94230402 0.0% 13/538 2.4% -5401411 -88828991 +26181 chr4 + 190214555 1598554 1598553 1599048 495 AGACGATTTTTAAGCGTGAAGAATTGCTGTCGTCCGATCCTTCTGGAACGCACCCCCTCCCG---GTTTGATGCCTTTTCTCTGCATAGTAATGTGTCTTTAAAAAAAAAGAGCCACTGATATATGTTACGAGAAGTGTATCTCTTACACTGAGACAGGACATTTTAATTCCCCGACACCTTTTAGTGATTGCTTCAATTTCCGAAGATTTTGATAAAATCATGCGGTTTAAGAGCCGCAGGATGGA--GCCCGG---CGGGCGGAGCGTAATGAAATGCTGCTGTTTCACAGC-CTTCACGTGGCACAGCCCAGCTCCGGGG-CTAATAAATGCTGCGTGATAAATGTTGGAGTCATGATTGTAAAAATATACTTGTAATTGGGTTAATATGCCTTAAAATACTACCCATCAGTTATCTTTCTCTCTCCT-CTCTGTAGCGTGCGCAGGGGTGCGTGCGGGTGCAGCACCGCGTT------CCTTCCCCGGCCCGCTTCCCTCCTGGCCTG chr4 - 94230402 7001478 7001477 7001979 87228424 87228423 87228925 502 AGACTATTTTTAAGTATGAAAAATGGCAGCAGCTAGACTTTTCTGGAATCTACTATGTCTCTTGTATTTGATGCCTTTTCTCTGCATAGTAATGTGTCTTTAAAAAAAAC---CCACTGATATATGTTACAAGGAGTGTATCTCTTTCACTGAGACAGAACATTTTAATTTCCCGACACCTTTTAGTGATTGCTTCAATTTCCAAAGATTTTGATAAAATCATGTGGTTTTAGAGTATCAGGATTGAATACCCTGCTCCGGCAGCAATTTAATGAAATGCCGTAGTTTCACAGCATTTCATTTGACATAACCTAGCTCAGAGGTCTAATAAATGCACTGTGATAAATGTTGGAGCTACGATTGTAAAAATATACTTGTAATTGGGTTAATATGCCTTAAAATACTACCCATCAGTTATCTTTCTTTTTGCTGTTATATGACTTGCAC-------TGTAAAGACGAAGCAATGCAGTTTACCCTTTTCCCCTGCTATCTCCTTTTCTTTCCTG ....x.........::....:...x..x.:x.::x..:::........:x:..:x:x..:.x---:...........................................x---.................:..:............x...........:...........:................................:....................:.....x....:xx......x..--:...x.---...xx.x.::x...........:.:x..........-:....:x..:..:.:..:.....x.:..-...........xx:................::.:..................................................................:.:.x..-:.x.:.::.x...:.-------:..:x:.::.x....x:..:x.------::......x..:xx..:.::.:..xx.... 62M3I45M3D134M2I6M3I36M1I28M1I107M1I15M7D22M6I30M 389/485 80.2% 502/94230402 0.0% 27/485 5.6% -5402924 -88827478 +3058 chr4 + 190214555 1600393 1600392 1600453 61 GCAGGTGGGGCCAGGGAGCCACTCTCCCTCTAACCCTCAGCCCCTCCCCTACTGCTGCCCC chr4 - 94230402 83299924 83299923 83299984 10930419 10930418 10930479 61 GCAGGTGGGGACAAAGAGCCCCGGCCCCCCAGGGCTGCAGCCCCCTCCTCACTGCTGCCCC ..........x..::.....x.xx:...:.x::x.:x.......::..::........... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -81699531 -12530871 +7022 chr4 + 190214555 1608729 1608728 1608864 136 CGTCCTTCACCCATCCCTG--CTC---GCCGGAGGGAGAGCCGTTTGGATCTGTCCAAGCTGAACAATGCAATACTTCTGCTGAGCTGTGAAGCTGATTAATAATTTGGAAATGAAATCAATATGGGTTCTGCTTTTCATT chr4 - 94230402 7018546 7018545 7018686 87211717 87211716 87211857 141 CGTCCTTCATCAGTTCTTGGACTCATAGCCAGAGGCAAAGATGTTAGGATTTGCTTGAGCTGAGCAATACAATATTTTTGTTCAGCTGTGAAGATGATTAATAATTTGGAAATTAAATCAATATATTCTTTCATTTTCATT .........:.x:.:.:..--...---...:....x.:..x:...x....:..::::......:....:.....:..:..:.x..........x...................x..........:xx:.:.xx........ 19M2I3M3I114M 105/136 77.2% 141/94230402 0.0% 5/136 3.7% -5409817 -88820585 +31341 chr4 + 190214555 1611877 1611876 1612327 451 AGCTAAAGTTCCTTGACCCGTGCCTGGCAG------GGGAGGTGGTTTTATAGGAGCCATTGACCGG--CGGCATTGATCCCCAAGAATGTATCGCACAAATCATTTTGCACTAAACTGCGGAATCGATGGAGAAATCTCCCGGAAAATTTATATTAAAAGTCTCTGTTTGCCTAAATGAGTTCCCTGTGC-CCATATTGAATATTTGGCTGATGAATTGAATGGGTTTAAATTTGAACATTGCAGACCCATTAAAGAATGAATTCTTAAATCAAACCCTGCCGTTTATGATTGAAATGAGATTTCCTCTGCAATGGGCCAGCCACTAAATAAATCAGCTGTATGTTTTATACTGAACCATAAACAAGATATAAGTCTTTTAAATACACAACAGGTGCCTTAAATCTTTTGATGCATCTTGTATTTATCTGAAGTGCAGATTGC---TGTATTTACACCAGGT chr4 - 94230402 7020496 7020495 7020956 87209447 87209446 87209907 461 AGTCAAAGTTCATTGACACGTTCTCTGTAGTCGGTGGGATGATTGTTTTATATTAGCCATTGACTTGGCCTGCATTGATCCTTGAGAATGTATCGCACAAATCATTTTGCACTAAACTGCTGAATCAATGAAGAAATCTCCTGGAAAATTTATATTAAAAGTCGCTGTTTGCCTAAATGAGTTTCCTGTGCTCCATATTGAATATTTTGTTGATGAATTGAATGAGTTTAAATTTGAACATTGCAGACCCATTAAAGAATGAATTCTTAAATCAACTTCTGCCATTTATGATTGAAATGAGATTTCCCCTGCAATAGACTAGCTGTTATATAAATCAGCTGTGCATTTTATACTGTACCATAAACAAGATATAATTCTTCTAAATACACAACAGGTGCCTTAAATCTTTTGATGCATCTTGTATTTATCTGA--TGTTGATTTTTAGTATATTTACAGCAGGT ..::.......x.....x...x.::x.:..------..:x.:.x........xx..........:x.--.x..........:::....................................x.....:...:..........:.....................x...................:.......-...............x.:..............:..................................................x::.....:.......................:.......:.:.:...:::..x.............:::..........x..................x....:....................................................--..:x....x:---.:........x..... 30M6I31M2I122M1I240M2D10M3I16M 395/449 88.0% 461/94230402 0.0% 14/449 3.1% -5408619 -88821783 +11498 chr4 + 190214555 1623588 1623587 1623910 323 GGTGACCTTGCGGTAACCCAAGTGC-CATCCGTCAGCAGACGGCCGCCCG-----------------CTCCGGAACACGGCGGCAGCTCATCTGAATTCAAATTACCC---------CGGGAGCCGCGCGATGCCAGCCATAACTCAGCCTGC--------------GGAGGAGTGCGGCCGCC-----GCGGATCGGACGTTACCATACATTCCCGGGGCGTCGGACAGGGCTGC-------------TAATGAAAATATCAATCAAAAACTTGCCTGACTTAATGGTCAATTTAAATTAATTAATTGGGGAGGAGAAAAAAGTTGAGGAGGGTGGCGTTGATGGGCTCCCTC------TCTGGCGGGCGGGGAGAA-GTGGGTGCCC chr4 - 94230402 7025388 7025387 7025769 87204634 87204633 87205015 382 GATGACCTTGTGATAACCCGTGTGTTCATCAGTCAAATTACTGTCCCCAGTAATGATAATGCCAAAGCTCTGGAACACTGGGGCAGCTAATCTGTATTCAAATTACACTCAATGAAACAGCAA--GCACAATTCGAGTAATAACTCA-CTAGCACTGAGAGGTGAAGGGAGATGCTCAGACCCCTTCATGCAGATTGGACATTATCATACATTTCTTAGGTGTTGGACAGGTCTGCATGAGAGGGTTGTTAATGAAAATATCAATCAAAAACTCTGCTGACTTAATGGTCAATTTAAATTAATTAATTGGAAAGG----AAAAGTTGAGAAGGACAGCATTGATTGTTTAGCTCAAAGCAGCTGGCAGTTGAGGAGAACGAGGCTGCCC .:........:.:......:x...:-....x....:xxx..x.:.x..x.-----------------...:.......x.x.......x.....x...........x.---------.:.x.:--..:.:..x.x..:x........-.:x..--------------....:x.:x.:.x.x..-----..:...:....:...:........:.:x:..:..:.......x....-------------........................:xx..................................::...----..........:...:::..:.....x.x:.xx...------x.....:.x:.:......-.x..x..... 25M1I24M17I41M9I6M2D22M1D5M14I17M5I47M13I66M4D35M6I18M1I10M 244/316 77.2% 382/94230402 0.0% 73/316 23.1% -5401800 -88828602 +8035 chr4 + 190214555 1640383 1640382 1640622 240 CCCGGGGTTTCCTAGCAACTAAAGCACACAAGGCGCCCTGCACAGCAGGCCTTT---CGTGGGGAACACAGAC--GCATGTTAATC--TGTTTGCAGATTCATGTTTAATAGAACGCCCTTCTGAAA-TGCATC-CAAAATAGAGAAGCTTT--CTCCCGAACTGCAAAAGCCATAAAAATGCAAAATGCTTCTTTAGGAAAAACTGAATCAAAATTACGCCTTAATGTTCCAAGCAACACGAAACCTACT chr4 - 94230402 7167906 7167905 7168155 87062248 87062247 87062497 250 CCGAAGGTTTATTACCAATTTCATTATGCAATTCACTTTTCACATTAAGCTCTTTAACAAAAGCAACATATACCCGCACCAGAATCACTGTAGACAGATTTA-GTTTTATAGAATGCCCTTCTGAAAATTCATTTCAAAATAGAGATGCTTTTTCTCCAGAACTGTAAAAGCCATAAAAATGCAAAATATCTGTTAGGAAATTTTTTAATCAAAATTATTCCTTAATGTTCAAAATAACATTTAACCTCCT ..x::.....x:..x...:.xx.x:.::...xx.:.::.x....x:.:..::..---.:x::.x....:.x..--...:xxx....--...xx:......:.-....x......:............-.x...:-...........x.....--....x......:......................:::.x..x:.:..xxx:.x...........:x...........x..::....:xx.....x.. 54M3I16M2I11M2I14M1D24M1I6M1I17M2I97M 172/239 72.0% 250/94230402 0.0% 12/239 5.0% -5527523 -88702879 +10846 chr4 + 190214555 1641289 1641288 1641625 337 AGCCTCAGTTGTTCTCGATCTGCTCCAGGTCCAGCTCCCAGCGGGCCCGGGGGAAGACGCCCTCCTCCCCGACACTGTCCCCATCACGGGGGTCCCCGCTGCTCCTGCGGGAGCCATCACTGGTCACCGACTCCCTAGAGGCCCACAGGTTGGGGTGGACAGGGCTGGTCCTGAGGCCCCT------------------------CTGGCTGCAGCCAGGCATGGTGATGCCAGGGAGGCCCCGGGAGTCACATGGGGAGGACAGAACCGTCTTCACTGGGGTGTCATCCTCATCGTCATCTTCGTAATTGAGGGAGCAAAGGCTTTTTGAATTTTTTAAAGTCTGCAATAGAAAAGATAC chr4 - 94230402 7168372 7168371 7168717 87061686 87061685 87062031 346 AGACTCAGTTGTTTTCAATCTGCTCTAGGTCCAAGTCCCCACAGTCTAGAGGAAAGATGCCCTCTTC---AGTGCTCTCACAATCACTTGTGTCCTCATCACTTTCACA--------TACTG-CAGCTGCTTTCTTATAATCCCTTGTTTTGAAGCTACCTTGGCATGACCCGTGATGCCTTACTTCATCCAGCTGTTCTTTCATCGGACTGGAACCAGGGGTGATGATGTTCATAAGATCATTTGAGTCACATGGGGATGACACAATTGTCTTCATTTGTGTGTCATCATCATCGTC---TTCATAATCAAGGGAGCAAAGACTTTTGGAATTTTTTAAAGTCTGTAATTGAAAAAATAC ..x..........:..:........:.......:x....x:.:.x.:x.:..:....:......:..---::::..x..x.x.....xx.x....:.::::..::::.:--------:....-:x:.:.x:.:.:..x.:x...x::xx...::.:x:x.xx...xx.x..:.x.::x...------------------------.x.:...x.:.....x:..:.....::x:x:..::.x:xx..............x....x..::.......:.x.x........x........---...:....::...........:.....x.................:...x.....:.... 67M3D39M8D5M1D58M24I93M3D60M 218/322 67.7% 346/94230402 0.0% 39/322 12.1% -5527083 -88703319 +6611 chr4 + 190214555 1649087 1649086 1649274 188 TGGGCAACAAGAGCAAAACAGAAAGGGAAAGGGAAGAGGAAGGGGAAGGGGAAGGGGAAAGGGAAGGGGAAAGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAG-GAGGGGAGGAAAGAAAAGGAAAGAGAAAG---AAAGAAGGAAACAAGGGAA chr4 - 94230402 93115336 93115335 93115527 1114876 1114875 1115067 192 tgagaaagggaggAGAAATGGTAAGGGGAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAAaagggaagagaagggaaatgggaagcgagaaaggaagagggaaaggaaaaagggaagggagaagagggaagaaatggaa ..:.x..x::::.x:...::.x.....:..::::::....::x.x....:..x.xx...:..:..xx..........:.....:.::..:..xx..x.:.x:x:.x.:.:....:..:...:......:..x......x.-..::...:..::....:.:...::.:...---:....:....:x..x.... 140M1I29M3I19M 120/188 63.8% 192/94230402 0.0% 4/188 2.1% -91466249 -2764153 +8806 chr4 + 190214555 1649089 1649088 1649283 195 GGCAACAAGAGCAAAACAGAAAGGGAAAGGGAAGAGGAAGGGGAAGGGGAAGGG-----GAAAGGGAAGGGGAAAGGGAAGGGGAAAGGGAAAGGG-----AAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAG------GAAAGAAAAGGAAAGAGAAAGAAAGAAGGAAACAAG---GGAACAAAGAAAG chr4 - 94230402 93115280 93115279 93115493 1114910 1114909 1115123 214 gggaaaaaaaggaaaagaaaaggggaaagggaaaaggaaagggagagggaagggaatgagaaagggaggAGAAATGGTAAGGGGAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAAaagggaagagaagggaaatgggaagcgagaaaggaagagggaaag ..x..x..:..x....x.:..:...........:.....:....::........-----........:.:.:..x..x.........::.:....:-----....:..x.xx......:..xx..........:.......::...:.xx:.x..:------:.:........:.......:.:..:x:....:.:..---....x.::..... 54M5I37M5I55M6I36M3I13M 146/195 74.9% 214/94230402 0.0% 19/195 9.7% -91466191 -2764211 +5389 chr4 + 190214555 1649095 1649094 1649281 187 AAGAGCAAAACAGAAAGGGAAAGGGAAGAGGAAGGGGAAGGG---GAAGGGGAAAGGGAAGGGGAAAGGGAAGGGGAAAG-------------------------GGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAA-GGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAAAGAGAAAGAAAGAAGGAAACAAGGGAACAAAGAA chr4 - 94230402 93115298 93115297 93115511 1114892 1114891 1115105 214 aaaggggaaagggaaaaggaaagggagagggaagggaatgagaaagggaggAGAAATGGTAAGGGGAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAAaagggaagagaagggaa--atgggaagcgagaaaggaagagggaaaggaaaaagggaagggagaa ..::.x:...x:....:.........:::.......:.x.:.---.:::..::..:x.:x::..::.:::.:.::.:.::-------------------------..........:.......::.....xx.:x.:.x.-:.x...:.:..:........:....:.--.x:.:..:x..:.:..:....::...:.:..x.......x::.... 42M3I35M25I35M1I27M2D46M 118/185 63.8% 214/94230402 0.0% 31/185 16.8% -91466203 -2764199 +7678 chr4 + 190214555 1649095 1649094 1649283 189 AAGAGCAAAACAGAAAGGGAAAGGGAAGAGGAAGGGGAAGGG-----GAAGGGGAAAGGGAAGGGGAAAGGGAAGGGGAAAGGG-----AAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAG----------AGGAGGGGAGGAAAGAAAAGGAAA---------GAGAAAGAAAGAAGGAAACAAGGGAACAAAGAAAG chr4 - 94230402 93115292 93115291 93115505 1114898 1114897 1115111 214 aaaagaaaaggggaaagggaaaaggaaagggagagggaagggaatgagaaagggaggAGAAATGGTAAGGGGAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAAaagggaagagaagggaaatgggaagcgagaaaggaagagggaaa----ggaaaaagggaag ..:..x...:x:..........:....::...::........-----...:....:::.:..x..x..:.....:::.:....:-----..:.:..x.xx......:..xx..................::.....xx..----------.:...:::...:....:....:..---------.......:....:.....----....x..:.:... 42M5I37M5I51M10I24M9I18M4D13M 138/185 74.6% 214/94230402 0.0% 33/185 17.8% -91466197 -2764205 +7643 chr4 + 190214555 1649096 1649095 1649278 183 AGAGCAAAACAGAAAGGGAAAGGGAAGAGGAAGGGGAAGGGGAAGGGGAAAGGGAAGGGGAAAGGGAAGGG-----------------------------GAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGA------AAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAAAGAGAAAGAAAGAA-GGAAACAAGGGAACAAA chr4 - 94230402 93115305 93115304 93115522 1114881 1114880 1115098 218 aaagggaaaaggaaagggagagggaag-ggaatgagaaagggaggAGAAATGGTAAGGGGAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAAaagggaagagaagggaaatgggaagcgagaaaggaagagggaaaggaaaaagggaagggagaagagggaagaaa .:..x:...x:........:.......-....x.:...:....:.:.:..x..x.........::.:.:..-----------------------------.................::.....xx..x.:.------...:....:..:.:.:......:..x:...:.x...:..:...:...:..::....:.::...-...:.x:......x... 27M1D43M29I32M6I63M1I17M 135/182 74.2% 218/94230402 0.0% 37/182 20.3% -91466209 -2764193 +3059 chr4 + 190214555 1649130 1649129 1649183 54 GGAAGGGGAAGGGGAAAGGGAAGGGGAAAGGGAAGGGGAAAGGGAAAGGGAAGG chr4 - 94230402 19799668 19799667 19799721 74430682 74430681 74430735 54 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGG ....:..:..:.:..x..........:.:......:::..:.::...:::.... 54M 38/54 70.4% 54/94230402 0.0% 0/54 0.0% -18150538 -76079864 +3181 chr4 + 190214555 1649154 1649153 1649207 54 GGAAAGGGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAG chr4 - 94230402 19799668 19799667 19799721 74430682 74430681 74430735 54 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGG .......:..:.:..x......:...:........:::....::...:::..:. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% -18150514 -76079888 +3312 chr4 + 190214555 1649160 1649159 1649213 54 GGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGGGGAAAGGGAAAGGGAAGG chr4 - 94230402 19799668 19799667 19799721 74430682 74430681 74430735 54 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGG ....:..:....:..x..........:........:::..:.::...:::.... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -18150508 -76079894 +3440 chr4 + 190214555 1649190 1649189 1649246 57 GGAAGGGGAAAGGGAAAGGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGA chr4 - 94230402 19799668 19799667 19799722 74430681 74430680 74430735 55 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAA--AAAAAAAAGGA ....:..:....:..x..........:.........::.:..:.--...:....... 44M2D11M 45/55 81.8% 55/94230402 0.0% 2/55 3.6% -18150478 -76079924 +3171 chr4 + 190214555 1649207 1649206 1649261 55 GGGAAGGGGAAGGGGAAGAGGAGGGGAGGAAAGAAAAGGAAAGAGAAAGAAAGAA chr4 - 94230402 55458164 55458163 55458218 38772185 38772184 38772239 55 GGGGAGGGAGGATGGGAAAAGAGGAGGGGAAAAAAAAAGACAGAGAAAAAAAGAA ...:....::::x..:.:.:....:.:.....:....:..x.......:...... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -53808957 -40421445 +23596 chr4 + 190214555 1654957 1654956 1655752 796 CTGGAAATAAGAAAGCCTCACCTGGGTCATTTTCAGGAAGTCCAAGGATGGGCGTGTCCACCTGGCGTCCTCCTCACGCCTCCGTTTGCGCCGGCTCCTCTTCCCACTGAGCACGCAAGGCTGTGAGCGGCACCGGAGCAGCCCACGGCGCCCGCCCAGCGCAGGCGTGGACGTGGGGCTGCTGCTGGCCCAGGGCAGGGGAGTGCCCGCACCCGCGAGTCGCTCCTGTGAGAGGGACGGGCGGCGCCTCGTG--GAGGGCAAGCAGGACTCCGCGGAACACCAGAGCGGGCCTGAGCCCGCACTGCCCTCGCTGCTGTCCACGAAGCCGCCGCTGGCGGAGGACGGCCGGGGCGTGGCGGGCGAGGTGGGACCGGT-----CGACCAC-----------ACAGCA--CTCCTCGGCAGGACGGCGCCGGGGCTTCCCTGCCGCGTGGCACTC---------------------------------CCGCCGCTGTCGCACCGCCTCTTGGAGACTGGAGTCCAGACCTTGGAGCTGCCGGGGCGCCAGGGGGACCGGCAGCGCACAAGCTCCTCGGGTTCTGACAAGGACCGGCAATGCCGCTTGGTCGGTGGGGCCGTGGACGAGCCTGTGCTTTCACTGGGGTCCACGGTGCTGGCTGCACCCAGGC-CTGCGCCTGGGCGCGGGGACTGTGGCTGCCACTG--AAGACCCA----TGGTGTGAGCGGCAGCAGACAGGCCCGGCAGGAAGGAGAAATCAGGGCCCGTGG---CTGCCTGGCTTCTGACGGGCGGTCCTCCACTGAAGACCTTCCAGGGACTCTGGTCTACAAAAAAAGACACAAAGAGGCAGGGG chr4 - 94230402 7204921 7204920 7205766 87024637 87024636 87025482 846 CTGAGGAAAGTAAAATCTCACCCGTGTCATTTTAAAAAAGTCTAACGAGGGCCTGTTCCATCGTACATCCTCCTCCCGTCTGCGCTTTAGCCGGCTTTTCTTCTCATTCAGAACACAAGGCTGAGAGCGGCACCTCAACAAGCCCTGACGTCGACTGAGCTCGGGTGTGGAGGTGGGAGTGCTGTTGGCTGAAGGCAAAAGGTTCCCTGTCTCGGTGATGTGCTCCTGGGAGAGGGAGAGGCGGCGCCTTGGGTTAAAGTCA--CAGGGCCCTCCGGAATTCCAGCGGGTACTGGAGCTCGTGCTTCCTTCACTGCTGTCCACAAACCCGCTGCTGGCAGAGGAAGGTCTGGGTACTGGTGATGTGTTGAAGCTGGTGACGGTGAAGACATTATTGAGGGACAGTATGTTTTGTGGCAGGCTGATGCTTGTGCTTCTCTGCAAGGTCGCACTTCCATGACTGTTGCAGCGTTGCAAGGTTGCGCTGCCACCGCTGTTGCATCGTCTCTTTGACACGGGAGTCCAAACCTTTGAATTGCCAGGTTTCCAGGGTGAGCGACAGCGAGCCAGCTCGTCTGGCTCCGAGAGGGACCTGCAGTGACGTTTTGTGGGTGGTGCCAAGGGCTGACCCGAGTTTTCGTTGAGGTTTAACTCACTGA-TCCATCCTGACACCATGGATGTGCTGGAGGGTTCCTGCTGCCACTGCAAAGCGCCATTGCTGGCAGGGCCGGTGCTGAAGGGGCACACTGGGAAAGGGTAGGCAGAATTCCTGGCATCAGTCTGGATT------GGACAACCCCCATTTAAAGCTTTCCAAGGACTGTCTTCTAGAAAAAAAA----AAAGAGATAGAGG ...:::.x.:x...::......:.x........x.::.....:..x..x..x.xxx....:.xx:.:........x..:..x..:..xx.......::.....:..:.x..x..:........x..........xx.:..:x..x:.:..:.x:.:x...x.:..:.....x.....:x.....:....:x.:....:::.:x.x..:.:x:.x.:..xx:.......x........x:..........:.x.--:.:.x..--....:.:.:x.....:x....x.x.x:.:x....:..::..x..:..:...........:..x....:......:.....x..:.x...:::x.xx.::.x.x..:::.:...-----:..xx..-----------....:.--:.::x:......x:.::..:x.x.....:....x:x..x.....:---------------------------------..:.......:...:..:.....x..x..x........:.....x..::....:..x:x......x..x..:.....x:.x.....x..x..:..:..x.:.....x...:..x..:..x..x.....x...:x..:.x::..:.x.:....::..:...::.xxx::...:-.x..:..x.:.-.:::.xx..x..xx.:..::.x:x..........--...xx...----...::x.:x...::x:::.x:...x.:x::....:.:.x.:x...::::.x...---.x.:....x..------..xx:x..:...:.x..::.:.....:.....x.xx....x.......:----......::..:.. 253M2I7M2D113M5I7M11I6M2I45M33I172M1D11M1I34M2I8M4I54M3I11M6D49M4D13M 513/783 65.5% 846/94230402 0.0% 76/783 9.7% -5549964 -88680438 +4220 chr4 + 190214555 1657383 1657382 1657499 117 CGGCCACAGCTCCTAAAGTGCTCACCGTTGAGCTCCAAAGGGAACAGACGACCGCTCTTGTTCAGGGTTTCCGCAGAATACTGCAACTGACAGGAAAGAGAAGTTTCAATACTGTGA chr4 - 94230402 7207955 7207954 7208070 87022333 87022332 87022448 116 CAGCTAAGGCTTCTGAAGAACTTACCGTTGATTTCGAAAGAGAACAAGCTGCCACTTTTGTTCAACTTCTCAGATGAGTACTGAAATCAATCAGAAA-AACAGTTTTAACTGTGTGA .:..:.x:...:..:...x:..:........x:..x....:.....::.x:..:..:.......:xx.:..x.xx..:.....x..:::.:x:....-.:x.....:..:xx..... 97M1D19M 76/116 65.5% 116/94230402 0.0% 1/116 0.9% -5550572 -88679830 +3127 chr4 + 190214555 1690027 1690026 1690109 83 CTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCCGCTTCCTGAGTAGCTGGGACTACAGGCGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::........:.x...x.xx.x...x..:.::::.........:......--..::......::.. 67M2D14M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% -16507099 -77723303 +3456 chr4 + 190214555 1690334 1690333 1690412 79 CCACAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .:...:..:xx:x..:.::........:.x...x.xx.x........:............:.:....--.::..:.... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -16506792 -77723610 +6382 chr4 + 190214555 1693597 1693596 1693729 133 TTAGCTCATGGCTGAGAAGTCTCTCAAGGGTTCAGTTAAACAAGCTTCCAAATCAAACTCATCCTCCACTTGACTGTCCATGTGTCTCACCTTGGTGGGTGTGCCAGAGTACACATCCTGGAAAACAGAAGCA chr4 - 94230402 7271652 7271651 7271784 86958619 86958618 86958751 133 TTAACTCACGCTATTTAAATCTTTAAGAGGCTCACTCAAACACGCTTCCAAGTCAAATTCGCCTTCTGCTTGATAGTCAATGTGTCTAACTTTGGTGGGAGTGCCAGAACAGGTATCCTGGAATACAAAGTCA ...:....:.x:xxxx..:...:.x.::..:...x.:.....x........:.....:..::.:..::.....:x...x........x..:........x........::.x::.........x...:.:x.. 133M 94/133 70.7% 133/94230402 0.0% 0/133 0.0% -5578055 -88652347 +7578 chr4 + 190214555 1696196 1696195 1696344 149 ACATACATTTCTTGCAAATCACATCCTTCTTCCGCTGGAGGATCCCAAAAATGCAGAGCCACCTTCCAGAGTTTGATTTGCTGGTCCCATGAACGTCGACTATACTTCTTAAATTTATTAGGGGTCTTGGGATGAATGCCAGGTTGTCG chr4 - 94230402 7286420 7286419 7286568 86943835 86943834 86943983 149 ACATACACTGGCTGCAGATCCCATGTTTCCTCAGTAGGAGGATCCCATGCATGCAGTGCTATCTTCCACAGCCTGATTTGCTGGTCCCACGATCTACGGCTGTATTTCTTAAATTTGTTTGGTGTTCTAGGATGAACTCCTGGTATTCG .......:.xx:....:...x...x:...:..x.:x...........x:x......x..:.:......x..::................:..x.xx..:..:..:...........:..x..x..::.:.......:x..x...xx... 149M 110/149 73.8% 149/94230402 0.0% 0/149 0.0% -5590224 -88640178 +9536 chr4 + 190214555 1696196 1696195 1696354 159 ACATACATTTCTTGCAAATCACATCCTTCTTCCGCTGGAGGATCCCAAAAATGCAGAGCCACCTTCCAGAGTTTGATTTGCTGGTCCCATGAACGTCGACTATACTTCTTAAATTTATTAGGGGTCTTGGGATGAATGCCAGGTTGTCGAAGGTGTCTA chr4 - 94230402 7273602 7273601 7273760 86956643 86956642 86956801 159 ACATACATTTCTTGCAGATCACATCCTTCTTCAGTCGGTGGATCCCAGGAATGCAATGCAACTTTCCACAGCTTTATTTGTTGGTCCCATGACCTACGGCTATACTTCTTAAATTTATTTGGAGTTCTGGGATGAACTCCTGGTATACGATGGCACCTA ................:...............x.::..x........::......:x..x..:.....x..:..x.....:...........x.xx..:....................x..:..::.........:x..x...xxx...x..:::... 159M 126/159 79.2% 159/94230402 0.0% 0/159 0.0% -5577406 -88652996 +6669 chr4 + 190214555 1699561 1699560 1699726 166 TACCTTGGGACTTCTTTAATATAACGATCGTAGGCAATTGTGTTCTTCCCATAGTTGATCTGCTTCTGTCTCCTCATTAGGACACTTTCATCTGTCTCAAAGTCAGCCGGCACAGTAGACATAGACTCCTTTGAATCAGAACTGAAAAAACAACAGATTAACAGAA chr4 - 94230402 7288684 7288683 7288842 86941561 86941560 86941719 159 TACTTAGGAACCTCTTTAATATATCTGTCATAAGCAAGTGTGTTCTTCCCAAAATTGATCTGTTTCTGTCTTCTCCTCAGAACCACTTCATCTGTTTCCCTTTCAGATGGGGTAG------CAGAATCATTTGAAACACAGCTT-AAAAACAAAAAGTTAGAACAA ...:.x..:..:...........x.x:..:..:....x.............x.:........:........:...x.:..:..xx:.........:..xxxx....x:..x::..------:...x..x......x..x.:..x-........x.::...:x.x.. 115M6D23M1D21M 116/159 73.0% 159/94230402 0.0% 7/159 4.4% -5589123 -88641279 +9692 chr4 + 190214555 1699561 1699560 1700132 572 TACCTTGGGACTTCTTTAATATAACGATCGTAGGCAATTGTGTTCTTCCCATAGTTGATCTGCTTCTGTCTCCTCATTAGGACACTTTCATCTGTCTCAAAGTCAGCCGGCACAGTAGACATAGACTCCTTTGAATCAGAACTGAAAAAACAACAGATTAACAGAATAAGCCCTGCAATTAAGATCACCATGTATGTAAGGTAAGCCAAGAAAATGTCAAAACACAATAATGGAAGATTCACTCCAGATTCCCAACCATATGAA----TCCTAAATA---GTCCGGAGACTGCATGTATGGGAAT-TTAGTACACAAC--AGATACAGTATTTCAAATTAGTGAAAAAGGTATTAATAAATGCTACTGCGACAGTCAGCATTTCTGACAGTCACAATTTTTTTTTTTTAACAAATTACAGG---TCTATCAAATTAGAAAAGAAACATTTACACAGCCTTTACCTTCCTGATGATGATTTTCTCTCTCTTCCAAAGTCATTGATGAGGAGTTTCCTTTTATATCTG---AGGGCAAAATAAATATTGCTGTTTTTAAAAAAGATATAAAAATAAAGCAGCCAGGTCTG chr4 - 94230402 7274426 7274425 7274926 86955477 86955476 86955977 501 TACCTAGGAACTTCTTTAATGTATCTGTCATACGCAATTGTGTTTTTTCCATAGTTTATCTGTTTTTGTCTTCTCATCAAAACCACCTCATCCGTCTCAAGTTCTACTGTTACAG------TGGACTCCTTTGAATCAGAACTGTAAGGATAGAATGTTA-------------TAAATTTGGGAGCACTATA-AAACAAGCGATACTCAAAAAAC----AAACTCAGACAAAGAAGACTCA----AAAG----AAACACATGAAGTGTTTTCAAATGAATGCTTGAAATGTGAATGAATTTTAATGTTGGGGGAGAGCTAAGATGTACTACTTCAACTT------GAGGGTTTTCAAAAGCAACACTGCA-----------TTTGAAAAGTCA-AATCT--------------ATTGCAAGGATTTTCTTCAGCTAAGCTAGAAAC-------------CTACCTTCCTGAAGAGGACTTCCTTTCTCTTGAAAACTCATTCACCAGGAGTTTTCTTCTGTATCTGCAAGAGTTCAAGTCAATATT----------AAGAATACACACAGAGAGAACATACATGGCTG .....x..:...........:..x.x:..:..x...........:..:........x.....:..:.....:.....:.::..xx::.....:.......:x..x:.:.x:....------.:.....................x..::.:.:x.x:...-------------.:x.x..::..x...:..:-.x::...xx.x:.:x.:....:----....x..:xx.x:.....:...----.:.x----..x..:.....----.:::....:---.:::.:.:xx..x...x..xxx...-..:.x:x.x.:.--....::.x..:.....x..------:.:...x..x.x..:::x:.....:-----------..:x:.x.....-...:.--------------...:..:.---.:.x.:x.::..::xx......-------------:...........x..x..:..:..:......xx...x.....x.:x........:...:.:......---::.x:x..:.x......----------..:..x.:.:.x.:.x.:.:..xx..x.x... 115M6D39M13D19M1D22M4D22M4D4M4D11M4I9M3I25M1I12M2I19M6D25M11D12M1D5M14D8M3I22M13D67M3I17M10D32M 327/485 67.4% 501/94230402 0.0% 103/485 21.2% -5574865 -88655537 +7868 chr4 + 190214555 1703588 1703587 1703725 138 ATGTGTACCTTGCCATTTCTTTGTTAACTCTGGTCCTCATTTCATCTTCTTCAACTGCACTTGCCCAGTCAGAGCATCTGGAACGGGGTTTAGGGCCTTCAGGAGTGGTAAAGCTGCAAT--AAAAGGAAAATGCTACTG chr4 - 94230402 7275375 7275374 7275514 86954889 86954888 86955028 140 ATGGGTACCTGGCAATTTCTTTGTTAACACTGGTTCTCATTTCATCTTCTTCCACTGCAGCTGCCCAGTCTAAACACCGGGAAAGGGGGCCAGGGCCTTCTGGTGTTGTAAAACTGGAAGGAAAAAGAAAAGTTCTATTG ...x......x..x..............x.....:.................x......x:.........x:.:..:.x....x....x::.........x..x..x.....:...x..x--.....:...:.x...:.. 120M2I18M 111/138 80.4% 140/94230402 0.0% 2/138 1.4% -5571787 -88658615 +3018 chr4 + 190214555 1707205 1707204 1707295 91 GACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 46924858 46924857 46924948 47305455 47305454 47305545 91 GGCAAGGTAAGATTTCTGCTTAAAAAATAACAGAATAAAAGAAAGTGAAGAAAATTGTTTGAAGAAAAATAAAAGAAAAAAAATGAGGGAA .:..::.::...:.:.xx..:......x..x.:..x....:...:x:..:....xx:xxx:..:.....x....:........x:.:::.. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% -45217653 -49012749 +3026 chr4 + 190214555 1707225 1707224 1707301 77 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGT chr4 - 94230402 25255641 25255640 25255717 68974686 68974685 68974762 77 CAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGT ..:..x.x.x..:....xx:..x.:.::..::x.x...................:::.xx:..:..x.:........ 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -23548416 -70681986 +3034 chr4 + 190214555 1707230 1707229 1707299 70 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA chr4 - 94230402 35652685 35652684 35652754 58577649 58577648 58577718 70 AAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAAAAAAAAAGA .....x...x..........::........:x.x::..:x...x:....x.x:.x::::........... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -33945455 -60284947 +3090 chr4 + 190214555 1711047 1711046 1711107 61 TCTTTAAAAAAAAAAAAAAAAAAAAAAAAGTAACGCAAAGGTAGTTTCTTGCATGATTCCG chr4 - 94230402 49431450 49431449 49431510 44798893 44798892 44798953 61 TCTTTAAAGAAAGAAAAAAAAAAAAAAAAGCCAAGACTGGGTAAGGTTTTGCATGGTTTTG ........:...:.................:x.x.xxx:....:xx.:.......:..::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -47720403 -46509999 +13506 chr4 + 190214555 1717178 1717177 1717431 254 ACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGTGAGGCACCACATGGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGCATGCAGCCTATGCAGGCCTCCAGCTCCTG chr4 - 94230402 7295645 7295644 7295898 86934505 86934504 86934758 254 ATTCATCGTATTATGCAAACATCTAAAATGCAAAATTTGGCTCTGCAAGTTGGACAAGGCACGTGGCTCGACAGCCAGGTCTCTGGGTGCTGCTGGTCCTGTCTGCTGGCAAACCATTTGCCCATGCAGGTGAGGCACCACATTGGACGACAGTAGCATTGCTGACATTCCCCTTCATTTGGCTCTTGGCAGTTCTTGATGAGCTTGATGTTTGCAATAGTCTGCATGCATCCTATGCATGGCTCCAGCTCCTG .:...x..:.:x:....x.....:.::.....:..x:xx..x.x...:..x..:..:......:....x.x.........x..x...:..x.xx.......x.x......:.....:..........................x..:..:.....:..:.....:..:..x...x::x:..x...:......x....x.:x.....x.:.:.x...xxx...........x........x.x............ 254M 191/254 75.2% 254/94230402 0.0% 0/254 0.0% -5578467 -88651935 +9167 chr4 + 190214555 1717511 1717510 1717693 183 CCCACCTGGCTGCTGGGCACTGAGTAGGCCGGGTTGACCTCTACCAGGGAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATGACCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAGCCTGCAGGGAGGAGAGCTG chr4 - 94230402 7296922 7296921 7297104 86933299 86933298 86933481 183 CTCACCTGAGTGCTTGGAACAAAATACGTCTGGTTCATTTCCACCAGAGACGTAAACGTTTCTAGAAATAAATCACTAAGGCTCTGATGGATCACAACATTGGCTGCATTGCTGATGGGAGCACGGAGCTTCTCTCGGAGCTCCCCATACTCTGCCGAGTTCAGCCTTGAAAAAGAAAAGATG .:......:x....x..x..x:.:..x.:.x....x.::..:.....:..x.:...:..:..:..:..:.::..:.:x........:.....x..x....x......x:...x......x..x...........x.:.........:.....x.:x...........xx.:::..:.:..x.. 183M 132/183 72.1% 183/94230402 0.0% 0/183 0.0% -5579411 -88650991 +22580 chr4 + 190214555 1718146 1718145 1718640 495 TCTTACCAGATGTCAAAGGCCTGCACAGCAGGGTTGGTGCTGGCCACACGGATGGTGAGGAGCTGCACGGGCAAGTTCGAGTCTGGCGAGAGCTCATGCTGCCGAGACTCCGTCACAGTCAGGTGCACGTCCTGCTGCTGGGCCACGTGCACTCGGTAGGTGGTTACCTTCATCACCCACGTGTCTGTCACAATCACACGGGCACCTGGTGCACCGGTGGCAAACTTGTCAATCCGCCGGAACTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCGGTCACGGGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGAGGGTCACGGCCAGCAGCAGGAAGAGCCGCCAGGCCTCAGGGGCCTGGCTGAGGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATGCCCACATAGTAGCCTGCAAAGGACAGG chr4 - 94230402 7299365 7299364 7299859 86930544 86930543 86931038 495 TTTTACCGGATATCAAACGCCTTCACATAGGGATTAACACTGGCAACACGGATGGTGAGGAATTGCACGGGCATGTTTGAGTCTGGTGTGAGTTCATGCTGTCTGGAGTCTGTCACAGTCAAATGAATGTCCTGCTGCTGGGCAACGTGTAGGCAGTAGGTGGTCACCTTGATCACCCATGTGTCTGTAACAATCACCCTTGCTCCTGGGGCTCCGGTGGCAAATTTGTCAATTCTCCTAAATTCTGTATTGATGGAAGAAGCCACTGCCCTCCAACCCGACTGTGGCAGAGCATAAACAGCGAGTGTCCGGGCCAATGGGTGGTTATTCCAACCCTTCCGTGACCAGTAATATGCCAGGGTGCTGCTGACTGCTGGAAGGAGAACAGCAAAGAAGAAGAAAGTTTTCCATTCTTTTGAGGCCAGGTAGAAAAAACAAAGGTGTTTCTCAGGTGCAGCGAAGCACATACCAAAGTAATAACCTGCAGGGAAAAGG .:.....:...:.....x....x....xx:..:..::::.....x................::..........x...:........:.x...:........:.x:..x..:..........::..x.:...............x.....:.xx.:.........:.....x........:........x........x.xx..x.....x..x...........:........:.x..x:..:..x..:....::..:..:..x..x...:x...:..x........x..:..:..:.x:..x..x..x..x....:.......:x:x:...x.xx.:x..x........:..x::....:...x.x:..:x.xx..:...:xx..:..x.:x.:x.:...::x::x...xx.:.:x.:....x..:x..:::x::::..x:.:..:..x.:x..x..:.:......:..x.x:..:..:......::.:.x... 495M 344/495 69.5% 495/94230402 0.0% 0/495 0.0% -5581219 -88649183 +13670 chr4 + 190214555 1720594 1720593 1721000 407 GCAGGAGAGGATGCGGCCGGCCGGCCCGAGCAGCCTCACCGAGCGGCAGCAGCGAGTGGCACAACAGCGTGGCGGCCGTGCGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCTCGCTGCCCAGCCAGCCCGACAGCAGGTTCTGCACCGTGAGCCCCGCCGCGTGGAACTCGTTGGGCGTGAACACGAAGCACACGGCGAACACCAGATAGGCGAGAGTGAAGGTCACCTCGGGGCTGTCCATCGCGCAGCCGCCGGGAAGCTGTCGAGCTAGGCCCCCGCC-CCGGCGCGCGGACGAGGCCGCAGCGCCCAGTCCCGGACCTGTCGGTTGCGGCGGCCGCCGCCCGGCCGCCCGCGGGGCACTCTAGGACATGGAGTCCCGCCGCCCGGCCGCCCGCGGGGCACTC chr4 - 94230402 7301229 7301228 7301586 86928817 86928816 86929174 358 GTAGGAAGGCAGCCCACCCCCCGGCCCG--CCGC-TCACCGAGGGGCAGCAGGGAGTGCGCCAGCAGCGTGCCGGTGCTGCGCCGCAGGTGGTACTGCACGAAGGCCGCGTCCTCGCTGCCCAGCCAAGCGGCCAACAGGCTCTGCACCGTCAGCCCGGCCGAGCGCACCTCGTCGGGCGGGAAGACGAAGCAGACGGCGAACACCAGGTAAGCCAACGTGAAGGTCACCGCCGGACTCTCCATCCTGC-GCCG------------CGGGCCCCGCTCCCGCCACCCACCCGCCCACAGGGGCACAGC-------------CCGGCCCGGCGCGACG----------------CCGCGCAGCTCCCTGGGAGCGGTAGTTCCGCCCCCCCCGCGCC-----GGCACTC .:....::.x.xx.x:..xx........--.x..-........x........x.....xxx..:.......x...:xx....x....:....x.xx..........x....................:x.x.x..:....:..........x.....x....x.:.x.x.....:.....x...x........x..............:..:..x.:x............x.x..:..x......x:..-....------------..:..:xx..:......-..x:.x...xx..::..x.:....-------------..x.:.x.x:...:..----------------.....x:..x.:..:...xxx.x...:.....x...xxx....-----....... 28M2D4M1D214M1D4M12D17M1I24M13D16M16D43M5D7M 269/357 75.4% 358/94230402 0.0% 51/357 14.3% -5580635 -88649767 +10352 chr4 + 190214555 1723405 1723404 1723822 418 TGTTCTGCTTTTCCAGAATGAGTCTGCAGGTCTTAAACGACAAAAATG---------TCAGCAATGAAAAAAATACAGAAAATTGCGACTTCCTGTTTTCGCCACCAGAAGTTACCGGAAGATCGTCTGTTCTTCGTGTGTCACAGAAAGAAAATGTGCCACCCAAGAACCTGGCCAAAGCTATGAAGGTAAGTGTGACCTGTACAGTGTGTGGCTGGCCAGGTTGCCCTAGGGCCTGCTTTCTTGGTGA---------CCTCTGAGCTGCAGGACACTGCTGGTGTGGCTGTAACAGCTTGAA------CTAATGAATAGGTGCTCTCCTCCTCACTCCGCAAC-------------------AGGTGACTTTTCAGACACCTCTGCGGGATCCACAGACGCACAGGATTCTAAGTCCTAGCATGGCCAGCAAACTTGAGGCTCCTTTCACTCAGGATGA chr4 - 94230402 7308756 7308755 7309177 86921226 86921225 86921647 422 TGTGTTGATATTGTAGAATGAGTCTGCAGATCTTAAATGCAGAAAATGGAGAAAACGTCAGTGATGATCTAACAGCGGAAGAGTGTGGCTTTTACTTTGCACTACCGGAACCTACAGAGAGACCTTCTATTCTGCGCCTATCCCAGAAAGAAAACTTGCCACCAAAAAGTGTGGCAAAAGCTATGAAGGTAAAATT---------------------------------------TTGCTTTCGTGTTGAGTATATTCTTCTATGATCTACAGTACTGAATATATGTGGTATTTGGAGCTTGAAAATATTCTGGTATTCATGTCCTTCCTTCTTCCTTCCCTTGCCTTCTTGTCCCTTTCTTAAAGGTAACCTTTCAAACTCCTCTAAGAGATCCTCAGTCTCGAAAAATATTAAGTCCTACCATGACAGACAAACTTGACTCTACTTTCACGCTTGACGA ...x:..x.x..x:...............:.......:.xx:......---------....::....xxx..xx:.:...:.x..:.:...::xx...x.:.:...:...x:...x.::...:.x...:....x..:x.:..x...........:x.......x..:.::x....x................:xx.---------------------------------------:.......x..x...---------:..x...x..:...x..xxx::xx:.....:xx.x:x........------..::.:xx:.x..x..::.:..:..x:...x:x:.-------------------....:..:.....:..x.....:x.:.....x...x.x.:x.::..x:.........x....:.x::.........xx..x.......x.xx..:.. 48M9I139M39D15M9I45M6I35M19I97M 255/379 67.3% 422/94230402 0.0% 82/379 21.6% -5585351 -88645051 +5811 chr4 + 190214555 1728379 1728378 1728706 328 AAATGGCCAGCTCCTCGAGGAGCGGACCTGTAAAACTAGAATTTGATGTATCTGATGGCGCCACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAAAGC----AGCAGTGAGGCAGCAAAAGGCCCCGCAGGAGGTGGAGGAGGACGACGGTAGGAGCGGAGCAGGAGAGGACCCCCCCATGCCAGCTTCTCGGGGCTCTTACCACCTCGACTGGGACAAAATGGATGACCCAAACTTCATCCCGTTCGGAGGTGACACCAA-------GTCTGGTTGCAGTG----AGGCCCAGCCCCCAGAAAGCCC chr4 - 94230402 7312853 7312852 7313173 86917230 86917229 86917550 321 AAAAGCCTGGTGTCACCAAGGCTGGACCAGTAAAACTGGAATTTGACTT------TGAGAACACCAGTGTTAGAAAACCACCTCCTAAGAAACTAGGTAAGAGACTTGGAATTAAGCCACCTTCCAAAAAAACTTTTAGTACCAAACTGAAAACAG-------AGAATACTGAAGTGGAAAA---TAAAAGTAATGTGGAAGATGAAGCTCCT------GTTCCTAGAGCGTCCTATAAGTTTGACTGGGACAAACTTGATGATCCAAACTTTAATCCATTTGGAGGAGGCTCTAAAATTTCCACCTCACCCAAGTGTTCTGAGCCCAGCTCTCAGAAAGTTC ...x.x.::.:x:.x.x.:.:x:.....x........:........:x.------..:x:x......::xx..::x...x..x..x.:..:...:..x:....::::..xx.:.....x..:.:x.::...:.----..:.x::.:x:::x..x..-------..:.x::x..:.x...x:.---..::..:::x.::.:...x..xx.:..:------.:.:..x.:.xx..:..:x.x:.:............x.x.....:........:.x:..:..:.....x.:.x.:..-------::..x:::xx....----::.......:.:.......::. 49M6D78M4I19M7D19M3D28M6D77M7I14M4I22M 184/306 60.1% 321/94230402 0.0% 37/306 12.1% -5584474 -88645928 +3024 chr4 + 190214555 1730012 1730011 1730063 52 TGGCCTGGTTTTTCCTAGGGTTATTTGTTTGTTTGTTTGTTTTTTGAGACAG chr4 - 94230402 76034086 76034085 76034137 18196266 18196265 18196317 52 TGGTTTGTGTTTTGTTAGGGTTTTTTGTTTGTTTGTTTGTTTTTTAGGGTGG ...::..xx....x:.......x......................::.:::. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -74304074 -19926328 +10231 chr4 + 190214555 1740807 1740806 1740989 183 TTGCTTTTCTTTTCTCAAGAGGAAGTTCAGAAGCAGAAGGAACTTTCCAAAGCTGAAATCCAGAAAGTTCTAAAAGAAAAAGACCAACTTACCACAGATCTGAACTCCATGGAGAAGTCCTTCTCCGACCTCTTCAAGCGTTTTGAGAAACAGAAAGAGGTGATCGAGGGCTACCGCAAGGTA chr4 - 94230402 7321976 7321975 7322158 86908245 86908244 86908427 183 TTACCTCTGCTTTCTTTAGAGGATTCTCAGAAACAGAAGGAGCTTTCAAAGAAAGAAATACAGAGGATGGTGGAAGAAAAGCAGCAAGTTATTTCAGATCTGAACTCTATGGAGAAATCTTTCTCTGAACTCTTCAAGCGTTTTGAAAAACAAAAAGAAGTGCTGGAGGGTTACCGCAAAGTA ..:.:.:.x:.....:x......xx:......:........:.....x..::xx.....x....:::.xx.::.......:x.x...x...::x.............:........:..:.....:..x.................:.....:.....:...x.x.....:........:... 183M 139/183 76.0% 183/94230402 0.0% 0/183 0.0% -5581169 -88649233 +7782 chr4 + 190214555 1744516 1744515 1744834 319 AGAACGAAGAGTCACTGAAGAAGTGCGTGGAGGATTACCTGGCAAGGATCACCCAGGAGGGCCAGAGGTACCAAGCCCTGAAGGCCCACGCGGAGGAGAAGCTGCAGCTGTGAGTGCTGGGC---------------------------------GAGGCCCCACCCTGG-----------------------AGGGAGAATC--------TGAGCACCTGGGCCCCAGCTCAGCCT--CTGCCC--------------CGCCCCTACCCCTCCA------GGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAGGCCAGCCTGAGGAAGGAGCAGATGCGCATCCAGTCGCTGGAGAAGACAGTGGAGCAGAAGGT chr4 - 94230402 7322954 7322953 7323355 86907048 86907047 86907449 402 AGAATGAAGAGGCTTTGAAAAAATGTGCTGAAGAATATCTGGCTAGAATTAAGAAAGAGGAACAGAGATACCAGGCACTAAAGGCACATGCTGAAGAAAAGCTGCATCAGTAAGTACTATGTCAAGAAGCTAATTGCTGCAAATTGTGGCTCATTAATGCCAAATTTTGGCTTACAATTTTTTTTTTACGTTCAAGTACAATAAACTAGTGTGATTCCATGAAC---AGTTCTGCTGTGCTGTCTGAAGGGAATGTAAACACCTGTATTTCTTCAATTCTAGAGCAAATGAGGAAATCGCCCAGGTACGAAACAAAGCTAAATCAGAAACTGCAGCCCTACAAGCCAGTCTCCGCAAAGAACAAATGAGGATCCAGTCTTTAGAGAGGAGCCTTGAACAAAAGGT ....:......x.x:....:..:..:.:x..:..x..:.....x..:..:.xxx.:....:x.....:.....:..x..:.....x..:..x..:..:........x.x..:...:..:x.:---------------------------------:.x...xx.:::...-----------------------.:.x.x...x--------...x:x.x..::.---..:..x..:x--...:.:--------------.:..:x..:::..:..------.:.....:.....:...........x..:.:...:..:x.:x.:...:.xx::.....x..:.....:..xx.x..:..:..:...x.x........x:.:....:..xxx.x..:..:..... 122M33I15M23I10M8I13M3D10M2I6M14I16M6I124M 211/316 66.8% 402/94230402 0.0% 89/316 28.2% -5578438 -88651964 +3174 chr4 + 190214555 1749164 1749163 1749247 84 CCCTCCCCCTGCCCCCTCCCCACCACGAACCCTCCCCACCTGTCCCCTCCTCACCTGTCCCCTCCCCACCTCCCCCCTCCCCAC chr4 - 94230402 34866265 34866264 34866348 59364055 59364054 59364138 84 CCCTCTCCCCGCTCCCTCCCCACCCCTCTCTCCCGCAGTCGGACCCCCCCGGTCCGGTCCCGGCCCCGCGTCCGCCGCTCCCAC .....:...:..:...........x.xxx.:.:.x.x::.x.x....:..xxx..x.....xx....:.x...x..x::..... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -33117101 -61113301 +3036 chr4 + 190214555 1799362 1799361 1799525 164 TCTGGGTCAAGGATGGCACAGGGCTGGTGCCCTCGGAGCGTGTCCTGGTGGGGCCCCAGCGGCTGCAGGTGCTGAATGCCTCCCACGAGGACTCCGGGGCCTACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAGGT chr4 - 94230402 7770609 7770608 7770772 86459631 86459630 86459794 164 TCTGGTTTAAAGATGGTATTGGGATTGCACCTTCCAACAGAACTCATATTGGACAAAAACTGTTGAAGATAATCAATGTGTCATATGACGATTCGGGGCTGTACAGTTGCAAGCCAAGGCATTCCAACGAGGTCCTGGGAAACTTTACAGTCAGAGTGACAGGT .....x.:..:.....:.:x...x.x.::..:..x:.xx.x:::.xx:.x..:.xxx.:.x.:..x..:.:x.x....:x..x:.:..x..:..x...x:x.....:...x:..x:x...x:x.xx.xx:x..x...x.xx....:.xx..xx.:......... 164M 93/164 56.7% 164/94230402 0.0% 0/164 0.0% -5971247 -88259155 +10784 chr4 + 190214555 1801355 1801354 1801558 204 CTCGGCCCGCAGGGGCCCCTTACTGGACACGGCCCGAGCGGATGGACAAGAAGCTGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCATCTCCTGGCTGAAGAACGGCAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCATCAAGGTGGGCGCGGCGGGGTGGCTCT chr4 - 94230402 7780661 7780660 7780863 86449540 86449539 86449742 203 CTCTTTCCTCAGGTGTCCCCTTCTGGACCCGGCCAGATAAGATGGAGAAGAAGCTGCTGGCAGTTCCTGCCGCCAACACCGTTCGCTTCCGATGTCCAGCAGGTGGAAACCCAACTCCCACCATTTACTGGCTGAAGAATGGCAAAGAATTCAAGGGAGAGCACAGGATCGGGGGCATCAAGGTAAG-GCCTCGGTTTGGGTCT ...xx:..x....x.:...:.x......x.....x..xx:......x..............x..x..x..............:........x..:.....x.x...x.....x......x....:.x............:....::..:...x:x..x......x.x..:..:...........::.-..xx...xx...x... 187M1D16M 157/203 77.3% 203/94230402 0.0% 1/203 0.5% -5979306 -88251096 +7827 chr4 + 190214555 1801617 1801616 1801748 132 CAGCTGCGGCATCAGCAGTGGAGCCTGGTCATGGAAAGCGTGGTGCCCTCGGACCGCGGCAACTACACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACACGCTGGACGTGCTGGGTGAG chr4 - 94230402 7785526 7785525 7785657 86444746 86444745 86444877 132 CAGTTGCGACACCAGCAGTGGAGCTTGGTGATGGAGAGCGTTGTGCCGTCAGATCGAGGAAACTACACCTGTGTTGTGGAGAACAAATATGGCAATATTAGGCACACATACCAGCTTGATGTTTTAGGTAAG ...:....:..:............:....x.....:.....x.....x..:..:..x..x...........:..:...........:.x.....::..:x....x..:...xx...x..:..x:.:...:.. 132M 102/132 77.3% 132/94230402 0.0% 0/132 0.0% -5983909 -88246493 +11426 chr4 + 190214555 1801832 1801831 1802030 199 CAGAGCGCTCCCCGCACCGGCCCATCCTGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCCACTGCAAGGTGTACAGTGACGCACAGCCCCACATCCAGTGGCTCAAGCACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACGGCACACCCTACGTTACCGTGCTCAAGGTGGG chr4 - 94230402 7786143 7786142 7786341 86444062 86444061 86444260 199 CAGAACGGTCACCCCACCGACCAATCCTGCAAGCAGGACTCCCTGCCAATCAGACTGTGGTGGTCGGGAGCAATGTGGAATTTCACTGCAAGGTCTACAGCGATGCCCAGCCTCATATCCAGTGGCTGAAACACGTAGAAGTCAACGGCAGCAAGTATGGACCTGATGGGACACCCTATGTCACAGTGCTGAAGGTTGG ....:..x..x..x.....:..x........:..:..:..x..x.....:.....x.:....x.x..x...:.:.....:..:...........x.....:..:..x.....:..:...........x..:.....:..:..x..:.........xxx..x..x..:..x........:..:..x.....x.....x.. 199M 154/199 77.4% 199/94230402 0.0% 0/199 0.0% -5984311 -88246091 +8123 chr4 + 190214555 1802894 1802893 1803081 188 CGGGTCTCT---TGTCCCCGCAGTCCTGGATCAGTGAGAGTGTGGAGGCCGACGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAGTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGCCGAGAAGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAA-----CGACTCTGTCCCA chr4 - 94230402 7790552 7790551 7790747 86439656 86439655 86439851 196 CAGGTTTCTGTCTATTCCTGCAGTCTTGGATCAGTAAAAACGCTGAAGCCGATGCTAACCTAAATCTGTTCAATGTGACAGAACAAGATGAAGGAGAATATCTGTGTAGAGCCAACAATTTCGTAGGCATAGCCGAAAAGCCATTTTGGCTCCACATTCGCAAACCAAAACCAGGTAAACCACAGACTCTGTCCCA .:...:...---.:.:..:......:.........:.:.::.:x..:.....:.:xx:...xx::...x:.......x.:..:.::..:.::..x..:..:..x...x......x.......:.....:.:.....:...x.x........xx:.:...:.:::..xx:.x.......-----x............ 9M3I166M5I13M 131/188 69.7% 196/94230402 0.0% 8/188 4.3% -5987658 -88242744 +10793 chr4 + 190214555 1803679 1803678 1803900 222 TCTCTCTTTGTAGACGGCGGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCGGGGAGTACACCTGCCTGGCGGGCAATTCTATTGGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGGTACCGGCTTCTGCTGCTGCTGCTGCTCC-GCACTGTCTGGGG------GACGCTGGCTCGGGACACGCCA chr4 - 94230402 7791794 7791793 7792019 86438384 86438383 86438609 226 TTTTCCCCTGTAGACGGCAGGTGTTAACACAACGGATAAGGAGCTAGAGATTCTGTACTTGCGAAATGTTACTTTTGAGGATGCTGGGGAATATACTTGTCTCGCAGGGAATTCTATTGGGTTCTCACATCACTCTGCTTGGCTGACGGTGCTACCAGGTATTTCCTTCTG-TGCTG--GCCTCTCCTTCCCTCTCCAGGGTGCTCTGACATTTGCTTTAGAGATGCCA .:.::.::..........:..:.:......x..x..:............:....x.x.....:x..:..:..:........:..:.....:..:..:..:..x..:..x..............:..x...........x......::......:.......::xx......-.....--..:x....-x.x..x..::...------...::.x...:x:..x.:.... 171M1D5M2D8M1I13M6I22M 166/219 75.8% 226/94230402 0.0% 10/219 4.6% -5988115 -88242287 +9541 chr4 + 190214555 1804291 1804290 1804545 255 GGGGGGCCAGGCCAGGCCTCA----ACGCCCATGTCTTTGCA----GCCGAGGAGGAGCTGGTGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGGCTGTGACGCTCTGCCGCCTGCGCAGCCCCCCCAAGAAAGGCCTGGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCCGCTCAAGCGACAGGTAACAGAAAGTAGATACCAGGTTC chr4 - 94230402 7794564 7794563 7794826 86435577 86435576 86435839 263 GGGCAGGCAGTGCTGGCCCCACCTGACGGCTGTCTCTTGTCACCCTGCAGCAGAGGAGCTGATGGAAATGGATGATTCGGGCTCAGTGTACGCTGGCATTCTCAGCTATGGCACTGGCTTAGTCCTCTTCATCCTGGTGCTGGTCATTGTGATTATCTGCAGGATGAAAATGCCAAACAAAAAGGCCATGAACACCACCACTGTACAGAAAGTCTCCAAATTTCCACTCAAGAGACAGGTAACAGAAAGTAGATACAAGATTC ...x:.x...xx.x....:..----...x.::.x....xx..----..x.x:.........:....:::x..:..xx.....xxx.....:..x.....:........:..x::x.....xx....x............x...:x::.....:xx.....x.xx..x:x.xx..xxx...:..:.x.x..::.x..x....:..:..x..::.....x:x..:..:......x.......................x..:... 21M4I17M4I217M 177/255 69.4% 263/94230402 0.0% 8/255 3.1% -5990273 -88240129 +8895 chr4 + 190214555 1804814 1804813 1804975 162 ACCCAAGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCGGGCCCGGTCAGT chr4 - 94230402 7795637 7795636 7795798 86434605 86434604 86434766 162 ACCCAAGCAGGTGTCGTTGGAGTCCAACTCTTCCATGAATTCCAACACACCCCTGGTCCGGATCACTCGTCTCTCCTCCAGCGATGGGCCGATGCTGGCCAACGTCTCTGAGCTGGAACTTCCTCCAGATCCCAAGTGGGAATTGGCACGTTCTCGGTCAGT ...............x:...........x.x.......::...........x.....x..x...:.xx.x..x.....x:.x..x..x..x.:.........:.....:.....x..:..x...x.x..:.....:.....::..x.x..xx.:........ 162M 125/162 77.2% 162/94230402 0.0% 0/162 0.0% -5990823 -88239579 +7710 chr4 + 190214555 1805340 1805339 1805484 145 TGCCTCCACTGCCAGGCTGACCCTGGGCAAGCCCCTTGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGATGCTGAAAGGTGAGGAG chr4 - 94230402 7795869 7795868 7796013 86434390 86434389 86434534 145 TGTTCCTCCCTCCAGCCTGACCCTGGGGAAGCCGCTTGGTGAGGGCTGTTTTGGCCAAGTGGTGATGGCGGAAGCAATTGGGATTGATAAAGACAAGCCAAACAAGGCCATCACCGTGGCTGTCAAGATGTTAAAAGGTATGGGG ..:::.:x.:x....x...........x.....x.....x........:..:.....:.....x........:..x..:..x.....:..:...x:.x.x:x....x.::.......:..:..x......:.:......:x..:. 145M 107/145 73.8% 145/94230402 0.0% 0/145 0.0% -5990529 -88239873 +9452 chr4 + 190214555 1805556 1805555 1805677 122 CAGACGATGCCACTGACAAGGACCTGTCGGACCTGGTGTCTGAGATGGAGATGATGAAGATGATCGGGAAACACAAAAACATCATCAACCTGCTGGGCGCCTGCACGCAGGGCGGTAGGTGC chr4 - 94230402 7797268 7797267 7797389 86433014 86433013 86433135 122 CAGATGATGCCACAGACAAGGACCTTTCAGACCTGGTCTCTGAGATGGAAATGATGAAGATGATTGGGAAGCACAAAAACATCATTAACCTGCTCGGTGCTTGCACGCAGGACGGTATGTGC ....:........x...........x..:........x...........:..............:.....:..............:........x..:..:..........:.....x.... 122M 108/122 88.5% 122/94230402 0.0% 0/122 0.0% -5991712 -88238690 +13201 chr4 + 190214555 1805733 1805732 1805950 218 GGAGCCCGTGTCCCCAGGGCCCCTGTACGTGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGGAGTTTCTGCGGGCGCGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGACCTGGTGTCCTGTGCCTACCAGGTGGCCCGGGGCATGGAGTACTTGGCCTCCCAGAAGGTGGGCAGGG chr4 - 94230402 7797800 7797799 7798017 86432386 86432385 86432603 218 GGTGCTCTTGCTTGCAGGACCGCTCTACGTGTTGGTTGAATATGCATCGAAGGGGAACTTGCGGGAATACCTCAGGGCACGTCGCCCACCTGGCATGGACTATTCCTTCGACACCTGCAAGCTGCCCGAGGAGCAGTTGACATTTAAAGACCTGGTTTCCTGCGCCTACCAGGTGGCCCGGGGCATGGAGTACTTGGCGTCACAGAAAGTGAGTTGAG ..x..:.x..:::x....:..x..x......:....x..:..:..:x.x.....x...:.......:.x:..xx....:..x..x..x..x...x.......:...................:.............:.x..x..:..:........x.....:...................................x..x.....:...:.:x.:. 218M 172/218 78.9% 218/94230402 0.0% 0/218 0.0% -5992067 -88238335 +7922 chr4 + 190214555 1806030 1806029 1806194 165 TGCCTCCCACCCCTTCCCCAGTGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGATGAAGATCGCAGACTTCGGGCTGGCCCGGGACGTGCACAACCTCGACTACTACAAGAAGACGACCAACGTGAGCCCGGCCCTGGGGTGC chr4 - 94230402 7799491 7799490 7799655 86430748 86430747 86430912 165 TGACTTGCTCACCTTTCACAGTGCATTCATCGTGACTTGGCAGCCAGGAATGTGTTAGTCACTGAGGACAATGTGATGAAAATAGCTGATTTTGGCCTTGCTAGAGACGTTCACAACATCGACTATTACAAGAAAACCACCAATGTAAGTACTGAACTGCCATGC ..x..:x.x.x....:.x........:..:x.x...:....x...x.x......:.:..x..:........:........:..x..x..:..:..x..x..:x.:.....x......x.......:........:..x.....:..:..:x.x.xx...xx:... 165M 120/165 72.7% 165/94230402 0.0% 0/165 0.0% -5993461 -88236941 +5944 chr4 + 190214555 1806201 1806200 1806341 141 GGGGGTCATGCCAGTAGGACGCCTGGCGCCAACACCGCCTTCCCACACCCTCCCAGGGCCGGCTGCCCGTGAAGTGGATGGCGCCTGAGGCCTTGTTTGACCGAGTCTACACTCACCAGAGTGACGTGTACGTGTCCTGCA chr4 - 94230402 7801104 7801103 7801233 86429170 86429169 86429299 130 GGGGAATATGCTGATGGGATGTTC-------CCATTGTTTTCCTAA----TCACAGGGTCGGCTGCCTGTGAAATGGATGGCTCCAGAAGCATTGTTTGACCGGGTCTATACTCACCAGAGCGATGTGTAAGCATTATCCA ....:x:....:::.:...:.:::-------x..::.::....:.x----..x.....:........:.....:........x..x..:..x...........:.....:...........:..:.....x.::.:x.x.. 24M7D15M4D91M 94/130 72.3% 130/94230402 0.0% 11/130 8.5% -5994903 -88235499 +3246 chr4 + 190214555 1806266 1806265 1806327 62 CCCGTGAAGTGGATGGCGCCTGAGGCCTTGTTTGACCGAGTCTACACTCACCAGAGTGACGT chr4 - 94230402 27085406 27085405 27085467 67144936 67144935 67144997 62 CCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGCGTTTACACCTTCGAGAGTGATGT ..:..............:.....::x.x.x..::..:.x..:.....::x.x.......:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -25279140 -68951262 +10243 chr4 + 190214555 1806526 1806525 1806691 166 GACCTCACCTTCCCCTGCAGCTGGTCCTTTGGGGTCCTGCTCTGGGAGATCTTCACGCTGGGGGGCTCCCCGTACCCCGGCATCCCTGTGGAGGAGCTCTTCAAGCTGCTGAAGGAGGGCCACCGCATGGACAAGCCCGCCAACTGCACACACGACCTGTGAGTGG chr4 - 94230402 7802447 7802446 7802612 86427791 86427790 86427956 166 GATCTTTCTTTGGTTTCCAGCTGGTCTTTTGGAGTGCTACTATGGGAGATCTTCACTTTGGGAGGGTCTCCGTACCCGGGAATTCCTGTTGAAGAACTCTTCAAACTCTTGAAAGAAGGCCATCGGATGGATAAACCCGCCAACTGCACCCACGACCTGTGAGTGG ..:..:x.:..xx::.x.........:.....:..x..:..x..............x:....:..x..:........x..x..:.....x..:..:........:..x:....:..:.....:..x.....:..:..............x................ 166M 131/166 78.9% 166/94230402 0.0% 0/166 0.0% -5995921 -88234481 +13885 chr4 + 190214555 1806822 1806821 1807326 505 CCCGCAGGTACATGATCATGCGGGAGTGCTGGCATGCCGCGCCCTCCCAGAGGCCCACCTTCAAGCAGCTGGTGGAGGACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGTGAGTGCTGGCTCTGGCCTGGTGCCACCCGCCTATGCCCCTCCCCCTGCCGTCCCCGGCCATCCTGCCCCCCAGAGTGCTGAGGTGTGGGGCGGGCCTTCTGGGGCACAGCCTGGGCA--CAGAGGTGGCTGTGCGAAGAGGGGCTCGGTGGCACAGCGCTCACCCCGCCTCCCGCCAGCAGGAGTACCTGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTGTTTGCCCACGACCTGCTGCCC-----------CCGGCCCCA-------CCCAGCAGTGGGGGCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAG----CCCACCCTGCTGCTGGTGCACAGC chr4 - 94230402 7803989 7803988 7804408 86425995 86425994 86426414 420 CCTGTAGGTACATGATCATGCGGGAGTGCTGGCACGCTGTCCCCTCGCAGCGACCCACATTCAAGCAGCTGGTGGAAGACCTGGACAGAGTCCTCACCATGACATCCACTGATGTGAGTG-TGGTGTTGGTGTGG----------------------------------------------------GAATACAGGGAGGGGTGGCTTGTC-------------CCTAAGCATGCTAACGTGTCTGT---------------------------------------CCCCTTTCAGGAGTACCTGGACCTCTCGGTGCCCTTTGAGCAATACTCACCCGCTGGCCAGGACACCCACAGCACCTGCTCCTCAGGGGACGACTCGGTTTTTGCACATGACCTGCTGCCTGATGAGCCCTGCCTGCCCAAGCACGTGCCCTGTAATGGCGTCATCCGCACGTGACGGCCCCCCAGGACAGACGGATGGACAGA----CAGGCAGTGTTCCCACCCTGGCGCAAGCGCAGAGC ..:.:.............................:..:.:x.....x...x.:.....x.................:.........x.x.....:...:....:.....:..:.......-...:x:...:x...----------------------------------------------------..:.:.x.:.:x.x.x...xx.:.-------------...::...--.x:.x...x....---------------------------------------..x.:xx.................x....:...:..:.....:.....x..x.x..............x....x..x...................x..x.....x..:...........:-----------..x....x.-------...x.:.:...x.x.x:x..x......x..x..x.::.xx.xx.xx:...x:x:.:----.x:....----.........x:..x:.:...x... 120M1D14M52D24M13D8M2I13M39D121M11I9M7I56M4D7M4I24M 300/396 75.8% 420/94230402 0.0% 133/396 33.6% -5997167 -88233235 +10875 chr4 + 190214555 1808267 1808266 1808698 432 CCCGGAGCTGGAGGATCCCCTCCAAGCCTAAAA--GGTTGTTAATAGTTGGAGGTGATTCCAGTGAAGATATTTTATTTCCTTTGTCCTTTTTCAGGAGAATTAGATTTCTATAGGATTTTTCTTTAGGAGATTTATTTTTTGGACTTCAAAGCAAG-----------------CTGGTATTTTCATACAAAT-TCTTCTAATTGCTGTGTGTCCCAGGCAGG-GAGACG----GTTTC------------CAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGTTACAAGTTTATATATATCTATATATATAATTTATTGAGTTTTTACAAGATGTATTTGTTGTAGACTT--------AACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAGCCGTGAATTCAG--TTGGTTCGTTCTGTACTGTTACTG chr4 - 94230402 7806594 7806593 7807017 86423386 86423385 86423809 424 CTTAGAGCCACAAAATCCTTACC----CTAAAATAAATAATTTATAGTTTGAGGTTATTTCAATGGAAGT---------------------TTGAGAAGG--TAGATTTCTATAGAATTTTGTTTTG-------------TTGGGATTAAAAAAAAAAGAAAAAAAAGAATTTTTTGGTATTTTCTTACAAATGTCTGCTAATTG-TGTACATTCCAAGTACTCGAAGCGTTGCGTTTCGTGTACTGAAAAAAGAAAATGTACAAAACTGTGCATGATTTCAAATGTTACTAGatattataaat------------atatatataatttattGAGTTTTTACAAGATGTATCTGTTGTAGACTTGTTGACTTAACATTTCTTATTCAATGCTTATATAGTTTTATAGCCTGGACTGTTATCTTTAAGAGCTT--AAAAAAATTAAAATTCCAATTTTGTTACATTTTATACTGTTGATG .:::....::x.::....::x..----......--::.x:..x......x.....x...:..:..:.::.---------------------..x..:..:--.............:.....x:...:-------------....:x..x...:x..:-----------------:..........x.......-...x.......-...:::.:...:.:.xx-..::..----.....------------x..::.:x.xx.::xx.....:::::x...x:......:.....:...:..:.------------...................................:............--------....:......:x........x..x...................:..:....x.:.....--.:::..::::x:.x.:..:--...x.x.:..:.:.......:x.. 23M4D6M2I35M21D9M2D25M13D17M17I19M1I11M1D17M1I6M4I5M12I53M12D48M8I60M2D19M2I24M 276/377 73.2% 424/94230402 0.0% 102/377 27.1% -5998327 -88232075 +8454 chr4 + 190214555 1814425 1814424 1814580 156 TAGCTCTTCACCTCTGCGACCTCCTTCTCTGCCTTCTCTTTGGCCTTCTCCTTCTCCTCCACCTTCTCCTCTTTTTCCAGTGTTGCTACAATCTCAGCCACCTGGCTGGTGGAGATGTGAACATCTTCTTTGTCCACCAGCTCAATCACCTACACA chr4 - 94230402 7876483 7876482 7876638 86353765 86353764 86353920 156 TAAttctttacttctgcagcttctttatcttgcttttcctttgctttctccttttcttccagtttttcttctttttGAAGCAGTGCCATAATCTCAGCGACCTGGCTGGTGCCAATATCAACATCTTCTTTGTCTATCAATTCTACTACCTACACA ..::....:..:.....::.:..:..x...xx...:..:..x..:........:..:....x:..:..:.......xx..::x...:.:.........x............xx:..:.x...............:.:..::..x.::......... 156M 115/156 73.7% 156/94230402 0.0% 0/156 0.0% -6062058 -88168344 +3048 chr4 + 190214555 1814426 1814425 1814495 70 AGCTCTTCACCTCTGCGACCTCCTTCTCTGCCTTCTCTTTGGCCTTCTCCTTCTCCTCCACCTTCTCCTC chr4 - 94230402 83420466 83420465 83420535 10809868 10809867 10809937 70 AGCTCAGCACCTCTGCCACCTTCCCCTCTGTCTTCTCTCTTGTCCTCCTCGACTGGACTATCATCTCCCC .....xx.........x....:.::.....:.......:.x.:.:..::.xx..xxx.:.:.x.....:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -81606040 -12624362 +7978 chr4 + 190214555 1815656 1815655 1815828 173 AGGCCCACCTTGACGAGGTCGTCGATGTTGACCTTGCCATCCTTGTTTTCATCCAGTGCTGCGGCCAGGCTGGTGAGCTTGCTTTCGGGAATGTGCTTGACTTGCTTCATGGCGTTGATGAGCTCAGCGACACTGATGACGTTCTCCCT---GTGGAAGCACAGCCTGCATGTGGC chr4 - 94230402 7878126 7878125 7878301 86352102 86352101 86352277 176 AGACTTACCTTAACAACATTATCTATATCAATTTTGCCATCTTTGTTTTCATCTAATGCCTCTGCAATCCTCGTTAGCTTCTCCTCTGGAATCTTCTGGATTTGTTTCATTGCATTAATTAGCTCAGCAATACTGATTAGATTCTCCCTAAAGAGGAAGCACAATCTGTATATGGC ..:.::.....:..:.x:.::..x..:.::.::........:...........:.:...:x.x..x.xx..x..x.....x:::..x.....x.x..x..:...:.....x..:..:..x........:.:......x.x:........---.x.........::...:..:.... 149M3I24M 123/173 71.1% 176/94230402 0.0% 3/173 1.7% -6062470 -88167932 +6283 chr4 + 190214555 1816720 1816719 1816945 226 CACTCACCCCGTGGGCATGCCGTTGGCCGGGGCCAGCTTGCCA------GCCTGCTGGTCCATCTCCAGCTGCGAGATCAAGCCATCGATCTGCCCGATCATTTGCTGCACCCTTTTTGTCAATCTCTTGCTGGCTTTAGATTCTTCCACGTACTTTTCTTCACCAGTCTTTGAAAGTTCCTTCTTGATCTCCTGCAAGTCCTAATAAAATTATTTTGGTTGTAAAAAGTTT chr4 - 94230402 7879474 7879473 7879702 86350701 86350700 86350929 229 CACTTACCCAGCAGGAGGACTGTCACCTCTATCAAGCTTTACATCCACCGTCTTTTGATTCGTCTCTAACTCATTAATAATTTTGTCTATCTGACCAATCATCCGGTTCACTCTTTTGGTCAGTCGCTTGCTCGCCTTTGATTCTTCTACTACTTCTTCCTGGCCAGCTTTAGAAAGCTCCTTT---ATTTCTTGCAAATCCTAAAAGAAGTGGTCAGGAAGAAAAACTTTT ....:....x.::..x:x:.:..::x.:xx:x.x.....xx..------.:..x:..:.:.:....:.:..xxxx:..x.xx:::..x.....x..:.....::.x.x...:.....x....:..x......x..:..x........:..xxx:.:...:.x:....::..x.....:.....:---..:..:.....:......x.:..x.:x.:x..xx.x....xx... 43M6I135M3D45M 141/223 63.2% 229/94230402 0.0% 9/223 4.0% -6062754 -88167648 +8152 chr4 + 190214555 1819333 1819332 1819484 152 CCCACCTCGCTGTAGTCCTGCACATCCTCCTTCAGCAGCTCCAGCTCCTCCTTCTCCTTGGTGAGTGACTTCTTCTGCTCCTGCAGCTTAGAGCAGGCATCGCTGAGGATGTCGATTTCCTCCTTCGTGATCTCTTCCTCCTGGGATAAAAA chr4 - 94230402 7880391 7880390 7880542 86349861 86349860 86350012 152 CTCACTTCATTATATTCCTGGATATCACCCTTCAGTTCCTCAAGCTCCTCCTTTTCCTTTGTTAGTGATTTCTTCTGTTCCTGCAGCTTGTTACAAGCATCACTCAGCATGTCAATCTCCTCCTTAGTTATTTCCTCACCCTGTAACAGAAA .:...:..::.:..x.....x.:...x:.......:xx...x...........:.....x..x.....:........:...........:xx:..:.....:..x..x.....:..:........x..x..:..:..x:....x:.:.:... 152M 113/152 74.3% 152/94230402 0.0% 0/152 0.0% -6061058 -88169344 +8144 chr4 + 190214555 1825558 1825557 1825711 154 ACGCACCTGCTTCAGCTGACCCCTCAGGCGGTCTTCCGTGACGCCCAGGGCCCGCATGCCTCGTGCCCGACACGCTGCCTGCAGCTCCTTGACATTCAGGCTGTCCACCCCTTCCTCAGCAATCAGCTAGAAAACAAAGCAGTGAATTATCATC chr4 - 94230402 7885594 7885593 7885744 86344659 86344658 86344809 151 ACATACCTGTTTAAGCTGTTCCCTGAGGCGCTCTTCTGTCACACCAAGGGCTCTCATTCCTCGTGCACGACAGGCTGCCTGCAGTTCTTTAACAGTCAGGCTGTCAACTCCTTCTTCAGCAATCATCT---GCACAAAGCATAAAATAAACTTC ..::.....:..x.....x:....x.....x.....:..x..:..x.....:.x...x........x.....x...........:..:..:...x..........x..:.....:..........x..---:x........xx:...x.x.x.. 128M3D23M 118/151 78.1% 151/94230402 0.0% 3/151 2.0% -6060036 -88170366 +7938 chr4 + 190214555 1834843 1834842 1834999 157 ACCTTCTGGAAAAACACAGAGAAGTCTTTGGTGGCGCTGCCCTTGGCTGCCTTGTTCTTCAAGGCCATCTCCTCGATGGTGTCCTGGAGGAACTTGGCCAGCTCCAGCTTGACCCGAAGCTCCTTCTTCAGCCTCTCCTCCTG-CAAGGGCAGAGAGG chr4 - 94230402 7888262 7888261 7888419 86341984 86341983 86342141 158 ACCTTTTGAAAGAACGTTGAAAAATCTTTTGTAACATTTCCTTTGGCTGCCTTATTTTTTAAGGCCATCTCCTCAATTGTATCTTGAAGGAATTTAGCTAATTCAAGCTTTACTCTCAGTTGTTTCTTCAATCTTTCCTCCTGTTAAAAGCAAACAAG .....:..:..:...::x..:..:.....x..::.::.x..:...........:..:..:..............:..x..:..:..:.....:..:..:.::..x.....x..:.xx..:.x:.......::..:........-:..::...:.x.:. 143M1I14M 112/157 71.3% 158/94230402 0.0% 1/157 0.6% -6053419 -88176983 +3067 chr4 + 190214555 1835410 1835409 1835487 78 CAGCCTGGGTGACAGAGCGAAACTCCGTCTCAAAAAAAAAACAAAAACAAAACAAAAACAAACAAACAAACAAACAAA chr4 - 94230402 84107456 84107455 84107533 10122870 10122869 10122947 78 CAGTTTGGGAGTTACACTGAAACTCAGAACAAGTGTAAGCATTAAGAAAAAACAAAAACAAACAAACAAACAAAAAAA ...::....x.x:.x.x:.......x.xx:x.:x:x..:x.:x..:.x..........................x... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -82272046 -11958356 +3085 chr4 + 190214555 1835440 1835439 1835492 53 CAAAAAAAAAACAAAAACAAAACAAAAACAAACAAACAAACAAACAAAAACAA chr4 - 94230402 4159746 4159745 4159798 90070605 90070604 90070657 53 CAGGAAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAAACCCAACCAA ..::.....x.x....x...........:...........x....xx..x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -2324306 -91906096 +3017 chr4 + 190214555 1835443 1835442 1835483 41 AAAAAAAACAAAAACAAAACAAAAACAAACAAACAAACAAA chr4 - 94230402 11261224 11261223 11261264 82969139 82969138 82969179 41 AAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAA .......:x...x.x.......................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -9425781 -84804621 +3352 chr4 + 190214555 1835450 1835449 1835500 51 ACAAAAACAAAACAAAAACAAACAAACAAACAAACAAAAACAAACAAACTC chr4 - 94230402 31704344 31704343 31704394 62526009 62526008 62526059 51 ACCAAAACAAAACTAAAACAAACAAACAAACAAAAAAAAACCAACTATTTC ..x..........x....................x......x...x.x:.. 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% -29868894 -64361508 +4004 chr4 + 190214555 1836217 1836216 1836281 65 CAAAAATAAATAAATAAATAAATAAATAACGAAATAAAGAGAAACAAATCCAAAACCCAGCATCC chr4 - 94230402 13134463 13134462 13134525 81095878 81095877 81095940 63 CAGAAACAAGCAAATGAA--AAGAAAGAATGAAACAAAAAGAAACAAATCCAAAACCCAGCATCC ..:...:..::....:..--..x...x..:....:...:.......................... 18M2D45M 53/63 84.1% 63/94230402 0.0% 2/63 3.2% -11298246 -82932156 +8679 chr4 + 190214555 1836424 1836423 1836579 156 CTTACCTTGAGTGACTGAGTCTCAAATGTGGATGGCAACATGTTGGGGAAGAGCTTCACAGCAACAGGCAGCAGAAACTCCATGAACGGCACCACCACGAACACAAGGAACGGCACCAGGCGGAAGAGGTCAGCGCAGATCCGGAGAAACTGGAAG chr4 - 94230402 7889575 7889574 7889730 86340673 86340672 86340828 156 CTTACCTTTTTAGACTTTGTCTCAAATGTAGACGGAAGCATATTAGGGAACAACTTCAGAGCTACTGGAAGCAGAAACTCCATAAATGGGACAACGAGAAAAACGAGGAAAGGAACCAAGCGGAAGAGATCAGCACATATTCGAAGAAACTGGAAG ........xxxx....xx...........:..:..x.:...:..:.....x.:.....x...x..x..x..............:..:..x..x..x.x:..x..:.....x..x....:.........:.....:..x..:..:............ 156M 121/156 77.6% 156/94230402 0.0% 0/156 0.0% -6053151 -88177251 +3191 chr4 + 190214555 1840669 1840668 1840723 55 AAATAAATAAATAAACAAATAAATATAAAAATAATAATAATAAAAAAAAAACGAA chr4 - 94230402 9708765 9708764 9708819 84521584 84521583 84521638 55 AAATATGTAAATAAAATAGTAAATACAAAAGTAATGAAGATAGAAAAAAAACAAA .....x:........xx.:......:....:....:.x:...:.........:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -7868096 -86362306 +17514 chr4 + 190214555 1841320 1841319 1841841 522 AGAAAGGACTAGACATGTCCCCATTACCTGCCTGCGCTCCCGGCGGGTCAGGCTGTGGCCGTTGAGGATGCGCCAGAGCATGCGTGCCGCGATCTTGGTGTCGATCCATAGCAGGCGGAAGCCATGGTAGTAGTGCTTCAGCTCGTCCAGCACCCGCTGCCCCAGGGACTTCTTCACCACCACCTCTGCGGGGGGGCTGTACACCGGGCCGCCTTCCTCCAGCTTCTTGTTCTTGTCCTTCAAGGACTTGAGGGACTTCTCTACTACCGAGTCATCGCGAACAGGGCGCGAAGAGTGCCAGCCACGCACAGGAAGGCACTGAGGTCCCACAGC-CACAAAACCCACAGAGGTAGAGGTCCATG--------GCGCTCTCGACACTATGCGAAGGCACTCGGGCCTCAG------AGCCCAACAGCCGAGGTGATCGCCTCTGGAGGATGTGTACACAGGGTGGATGGGAGTGCAGCAGCCAAATGGAACATTCCTTGAAAAGGGAAGAGTGGAAAACAGTAGTAAGAGCCAGCACTA chr4 - 94230402 7894101 7894100 7894626 86335777 86335776 86336302 526 AGAATGAAATTGGTATTTACTCAGTACCTGTCTCCGTTCTCGACGTGACAGAGTATTTCCATGTAGTATTCGCCAAAGCATCCTTGCAGCTATTTTTGTGTCAATCCAGAGTAATCGAAAACCATGGTAATAGTGCTTCAGCTCATCCACAATCCTCTGTCCAATAGATTTTTTCACAACTTCCACTTCTGTTGGACTATATACAGGACCCCCTTCTTCCAACTTCTTGTTTTTGTCCTTTAAGGACTTCAGGGACTTTTCAACTATGGAGTCATCTTGAAGAGAACGTGAAGAATGCCACCACCTAACTGGGAGATATTTGGGTCCTAAAACACCCATGGCTGCCAGGGGC----GTCCATGAGCCAGAAGAGCTCATAAGAGT-----AAAGTACGTTCGTTCCAATCCTTTAGTCCAACAACAGTAGTGATCTTTTTTGGAGTATGCGTAAACAGGAGCAACACTAGTGCAATATTTAAAGTGTACAGTCCTTCAAAAGAAAAGAAGAAAGAGCATT--CAAAAACTAACAATA ....x.:.x.x.::..x.x.:..x......:..x..:..:..:..x.x...:x.:.xx..:.xx..x..x.....:.....x.x...x..x..:..x.....:.....x..:.:x..:..:........:..............:....xx.:..x...:..x.x:..:..:.....x..:x..x..x.x.xx..:..:..:..x..:..x.....:....:.........:........:........x........:..x....:x........x:...x..::..:.....:.....x.xx.xx..x..:..::.:.x:.....:.x.:.-.x..x::.:xx...:..:----.......--------.x....x::.x.x.-----..:.:..x:xx.:::..:------..:......:.x.x:......x::.:.....x...:...x.....:xx:.::xx......::.x::...xx.x...x.....x.....::....:x::.:.:..x.--:..:.:.:.:..x.. 333M1I18M4D7M8I14M5D18M6I106M2D15M 343/511 67.1% 526/94230402 0.0% 26/511 5.1% -6052781 -88177621 +3634 chr4 + 190214555 1849340 1849339 1849422 83 CTGCAACCTCCACCTCCTGGGTTTAATTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx.x..:.......:..x..x...x.xx.x........::::...........:....x...--......::.. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -16347786 -77882616 +3121 chr4 + 190214555 1860610 1860609 1860689 80 TATATATATGTGTGTGTATATATATATGTATATATATGTATATGTATATATATGTGTGTATATATATATATATATATATA chr4 - 94230402 81401294 81401293 81401373 12829030 12829029 12829109 80 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ...x.x.:...x.....x..x.x....:..:...x:x...:.....x:.:.:.....:..x..:.x:....:x..:..:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -79540684 -14689718 +3078 chr4 + 190214555 1860645 1860644 1860692 48 ATGTATATGTATATATATGTGTGTATATATATATATATATATATATAT chr4 - 94230402 43600823 43600822 43600870 50629533 50629532 50629580 48 ATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT ....x.:.....x..:...........:....x......x:....... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -41740178 -52490224 +3296 chr4 + 190214555 1865157 1865156 1865210 54 CTCCCAGGTTTAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACA chr4 - 94230402 18197139 18197138 18197192 76033211 76033210 76033264 54 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.::....:...:.x...x..x.x........::...........:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -16331982 -77898420 +3139 chr4 + 190214555 1872571 1872570 1872610 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -17109744 -77120658 +3102 chr4 + 190214555 1872573 1872572 1872608 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -79756491 -14473911 +3353 chr4 + 190214555 1872573 1872572 1872612 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -17109742 -77120660 +3316 chr4 + 190214555 1872575 1872574 1872610 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -79756489 -14473913 +3567 chr4 + 190214555 1872575 1872574 1872614 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -17109740 -77120662 +3102 chr4 + 190214555 1872577 1872576 1872612 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -79756487 -14473915 +3353 chr4 + 190214555 1872577 1872576 1872616 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -17109738 -77120664 +3139 chr4 + 190214555 1872579 1872578 1872618 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -17109736 -77120666 +3158 chr4 + 190214555 1878222 1878221 1878293 72 GGCTGATATATATATATATATATATATATATTTTTTTTTTTTTTTTT------TTTTTTTTTTTTTTTTGTATTTTTA chr4 - 94230402 5683036 5683035 5683113 88547290 88547289 88547367 78 GGGTGATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGAGGAGTTTTCTGGTTGTTATGGGGTTGTTA ..x.......:.:.:.:...:........:x................------....:.xx..x..x.x.x:..x... 47M6I25M 55/72 76.4% 78/94230402 0.0% 6/72 8.3% -3804814 -90425588 +3153 chr4 + 190214555 1878226 1878225 1878277 52 GATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200276 4200275 4200327 90030076 90030075 90030127 52 GATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT .............:.:.:..............::...:xxx.......x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -2322050 -91908352 +3014 chr4 + 190214555 1878227 1878226 1878287 61 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTA chr4 - 94230402 4865459 4865458 4865519 89364884 89364883 89364944 61 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTA ..............x.:x.x...x.xxx.:.........x..x....x..........x.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -2987232 -91243170 +3039 chr4 + 190214555 1878227 1878226 1878279 53 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:......x.x......:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -90857124 -3373278 +3071 chr4 + 190214555 1878227 1878226 1878277 51 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.....:...:..:.:........x......:.x.........:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -90857126 -3373276 +3217 chr4 + 190214555 1878228 1878227 1878275 48 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735403 1495000 1494999 1495047 48 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....:...:..:.:...............:.x.........:.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -90857128 -3373274 +3027 chr4 + 190214555 1881338 1881337 1881411 74 CTGCAACCTCCGCCTCCTGGGTTTACGCCATTCTCCTGCCTCAGCCTCCCCAGCAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.......:.x.:xx...x.xx.x........::.x..:......:......x.:.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -16315788 -77914614 +3627 chr4 + 190214555 1896701 1896700 1896827 127 CATTCCTCTCCTTCCTTCCTTTCCTTCCTTCCCTTCTCTCTTTCTCTTTCTTTCTTTCCTTCTTTCTTCTCTTTTTTTTCTTTTCTTTTCTTTCTTTCTCTCTCATTCTTTCTTTCTTTCTTTTCCT chr4 - 94230402 43081898 43081897 43082024 51148379 51148378 51148505 127 CGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .::...::......x.x.:.:xxxx.x..x:..:..::.:.:::.:...:.:...:x..:..:x.x...:x...:xx....xxx...:.x..............x:...:.x.xx...::.:..:.. 127M 76/127 59.8% 127/94230402 0.0% 0/127 0.0% -41185197 -53045205 +3040 chr4 + 190214555 1900587 1900586 1900626 40 TTGCTTTTTCTTTCTTTTTTCTTTTTTTTAATACCATAGT chr4 - 94230402 28647539 28647538 28647578 65582825 65582824 65582864 40 TTGCTTTTTTTTTCTTTTTTCTTTTTCTGAATAACATAGT .........:................:.x....x...... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -26746952 -67483450 +39426 chr4 + 190214555 1900592 1900591 1901257 666 TTTTCTTTCTTTTTTCTTTTTTTTAATACCATAGTGTTCTAAGAACGGAAGCATCTGGGCTGGATGGAATTTAGCATCAAGCAGAGTCCCC---TTTCTGTTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAAGATCTTACTTCCCGGGTGTTTAATGGAGAACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGATTGGGACACCCCCTAACACTACCCCTATCAAAAATGGCTCTCCAGAAATTAAGCTGAAAATCACCAAAACATACATGAATGGGAAGCCTCTCTTTGAATCTTCCATTTGTGGTGACAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAGGAAGAGGAGCATAAAATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAGATCTCAAGTCCTTCAGATAAAAAGGTATTT chr4 - 94230402 7939764 7939763 7940426 86289977 86289976 86290639 663 TTTTCTGTTTTTTTTTTTTTTCTTCGTATAGCAGTGT---AAGACTGGAAACATCTGGGCTGGATGGACTTTAGCATCAAAAGAAGTTCTCAACTTTTAACTCGAAAAATT---AACTACTTAAAAATGAAGCAAGTACCAGAGATCCTTGGAAATACCAATGGGAAAACTCAGAATTGTGAAGTGAATCGTGAGTGTTCTGTCTACTTGGGCAAAGCACAACTTTCTGCCACTCTACAGGAAGGTGTCATGCAAAAATATAACGGCCACGACGCTCTTCCATTCATCCCAGCTGATAAGTTGAAAGATCTAACTTCTCGTGTGTTCAATGGCGAGTCCGGGGCCCAGGATGCCAAGCTGCGCTTTGAACCCCAGGAAATAAAAGGAGTTGGAACACCACCAAACACTACTCCTATCAAGAATGGTTCTCCAGAAATCAAGCTGAAAATCACTAAAACCTACATGAATGGAAAACCTCTGTTTGAGTCTTCCATTTGTGGAGACAATGGTGCAGATGTGTCTCAATCAGAGGAAAATGAACAAAAAACAACAAACAAGGAGAGGAGAAACAGAAAAAGAAGCATAAAATATGACTCCTTACTTGAGCAGGGTCTTGTTGAAGCAGCGTTGGTGTCAAAGACTTCAAGCTCCCCTGAAAATAAGGTACTT ......x.:......:.....:..x:..:x::.....---....x:....:.................x...........:x::...:.:.---...:x::..::.:x:..---..x.:.x....:........:.:......:.....:..x.:.:....:.....:....x..::..:..:.....:..:...........x.x.:.x:.......x..:..:..::x:.x:..:.....:..x........:..:.x...............:..x..x..:..:.....:..:...:..........x.....:..x.....:.....x..::....x..x..x........:.....:.....::..........:.....::....:.....x..x........:........:.....:...........:..............:.....x...........:..:.....x.....:..............x....:..x...x...........:.....:.......:.......x..:x........x...:..:.....:..:..:....................:..x........:.....:........x:.x.....x....::.....::.::.x..x..x......:.. 37M3D51M3I17M3D555M 519/660 78.6% 663/94230402 0.0% 9/660 1.4% -6039172 -88191230 +9231 chr4 + 190214555 1904181 1904180 1904382 202 TGTGTTAGTGTTTGTCTTCTGTTGTTCATTTTCAGATTCCAGCTAAGAAAGAGTCTTGTCCAAACAC--TGGAAGA-GACAAAGACCACCTGTTGAAATACAACGTTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATCCACTCCTTCACAGCTATACCAAACTTAAAGGTAT chr4 - 94230402 7955552 7955551 7955756 86274647 86274646 86274851 205 TGTGATAATATTTTTCCCCTTTTTTCTTTTTTAAGGCTCCTGCTAAGAGAGATTCAACACAAAGTACCATCAAAGATGACAAAGTCCATCTGTTGAAGTATAATATAGGAGATCTAGTGTGGTCAAAAGTATCAGGTTTTCCTTGGTGGCCATGTATGGTTTCTGCTGATCCTATTCTTCATTCCTACACTAAACTAAAAGGTAT ....x..:.:...x..::..x..x.::x....x..::...x.......:...x..xxxx.x..::..--.x:....-.......x...:........:..:..::.x..x...:.:........x.....:..:....x:...........x..:...........x.....xx.:.....:xx...:..:.....x........ 67M2I7M1I128M 149/202 73.8% 205/94230402 0.0% 3/202 1.5% -6051371 -88179031 +3186 chr4 + 190214555 1906638 1906637 1906674 37 ACTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929911 18929910 18929947 75300456 75300455 75300492 37 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:................:.................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -17023273 -77207129 +3007 chr4 + 190214555 1906640 1906639 1906692 53 TTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACACAGTTTCA chr4 - 94230402 45399591 45399590 45399643 48830760 48830759 48830812 53 TCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTATGCAAAAATTTCA .::............................::..:.x.:x.xx.x.:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -43492951 -50737451 +3041 chr4 + 190214555 1907611 1907610 1907674 64 ATCTCTTTTTTTTTTTTTTTTTTTTTTTGTGACACAGTCTCACTCTGTTGCCAGGCTGGAGTGC chr4 - 94230402 60903207 60903206 60903270 33327133 33327132 33327196 64 ATTTCAGCCTTTTTTTTTTTTTTTTTTTCCAGCACAGTTTTAGTCTGTTGAAGATCAGGAGTGC ..:..xx::...................x:::......:.:.x.......xx::x.x....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -58995596 -35234806 +11554 chr4 + 190214555 1916850 1916849 1917050 201 ACATTTTATTTTAAAAACTAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATATTTGAGAAGAGCCTCGTAGCTTTTGAAGGAGAAGGACAGTTTGAAAAATTATGCCAGGAAAGTGCCAAGCAGGCACCCACGAAAGCTGAGAAAATTAAGGTGATAGATGACC chr4 - 94230402 7961802 7961801 7962002 86268401 86268400 86268601 201 ACATTTGTTTTTATTTTTCAGGACAGAAAAAGAGTTTTCGTCAGTATCATGTTCAGTTTTTTGGAGATGCTCCAGAACGAGCCTGGATATTTGAGAAGAGCCTTGTGCCTTTCAAAGGAAAAGATCAATTTGAACAATTATGCCAGGAAAGTGCAAAACAAGCCCTCACTAAAGCAGAGAAAATAAAGGTAAGAGGCTACC ......xx.....xxxx::...x............x:x..:........:..x.....:.....x..:..:......x....:....................:..:x....::.....:...:x..:......x...................x..:..:..x.:...x.....x........x.....:.x..::x... 201M 157/201 78.1% 201/94230402 0.0% 0/201 0.0% -6044952 -88185450 +3610 chr4 + 190214555 1917525 1917524 1917583 59 CCTCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .:..:.........:.x...x.xx.x........::.............:....x.... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -16279614 -77950788 +3479 chr4 + 190214555 1917868 1917867 1917938 71 GCCTCCCAGTTCAAGTGATTCTCATGTCTCAGCCTCCCTAGTAGCTGGGACCACAGGCATGCACTACCATG chr4 - 94230402 18197138 18197137 18197206 76033197 76033196 76033265 69 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:x:.........x...x..x.x........::.x.........:..:...--.:.....:..::.. 55M2D14M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -16279270 -77951132 +21697 chr4 + 190214555 1918113 1918112 1918629 517 CTTACAGTGTCTCTTTTTTTTTTCCCAGCTATTGAAACCAATTTCAGGGAAATTGAGGGCCCAGTGGGAAATGGGCATTGTTCAAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGGGGGACCAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAAATGGCA---GAATCCTCAGGAGTCAGTGAAGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGAGGG---CCAAACTGTGTAGCTCTGCAGAGACCCTGGAG---AGTCACCCCGACATAGGGAAGAGTACTCCTCAAAAGACGGCAG---AGGCTGACCCCAGAAGAGGAGTAGGGTCTCCTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTGTCAAAAACACAGGGATGAGGTCAGT chr4 - 94230402 7962315 7962314 7962840 86267563 86267562 86268088 526 CTCACAGTAT---TTTCTTATCTTGCAGATGTTAAAGCCTGTTCCAGGGAAGCTGCGACCGCAGTGGGAGATGGGTGTTAAGCAAGCAAGTGAAGCAGTAGGCATGACAGTGGAAGAACGGAAGGCCAAATACACCTTCATCTACATTAGGGACAGACCTCATCTTAATCCTCAAGTGGCAAAGGAAGTTGGCATTGCTGTGGAGCTTTTAGAGGAGGAGGTAGATGAGTCATCTTACTCAAATGAAGAAACCTCCGAAAATCTGAAATCAATGAAGGAGTCTGGCATTCCTAACAAGAGGAGGAGAAGGACATCAAAATTGTCTGCCACTGATGATACACAAGAAAGCAGTCAGTTGGAGACTAAGAATACTACTCCTCAAAAGTCATCTGAACAGGCTGAATCCAAAAGAGGGATAGGCTCCCCTCTGAGTAGAAAGAAAACTCCAGCATCTACTCCACGAAGCAGAAAGGGCGATGCAGTATCTCAGTTTTTGGTCTTCTGTCAGAAGCACAGAGATGAGGTTAGT ..:.....:.---...:..x.:.:x...x.:..:..:..x:..:.......::..x.:x.x........:.....::..:xx......::x.....x.:.:.....x.......:..:.....:.....:.x......:x....::.x:.....x::.:......:..:........:..x.....:.:...........::...::...:.::..::x..:.---..:..x..xx:xx:x.:.......:.:x.:.....:.:x..:..x:...::..:xxxx.......:.xx.....:...x.:...:---.x...:...x.:x.x...xx..x..x.x:..:---.....x::x..x.:x::...x.x.............x.:x.x.---.......x:...:......::....x..:....:x:.x..:.....:..:x...:x..:.:x...........:.....x.......:...:....................:..:.....:........:... 10M3D210M3I85M3I32M3I43M3I134M 359/514 69.8% 526/94230402 0.0% 15/514 2.9% -6044202 -88186200 +3092 chr4 + 190214555 1925759 1925758 1925850 92 TATCTATATATATATTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTGAGACAGGGTCTTACTCTGTCGCCCAGGCTG chr4 - 94230402 52822751 52822750 52822842 41407561 41407560 41407652 92 TAACTACATGTTGTTTTTCTTCTGTTTGATTGTTTGTGTGTGTTTGTTTGGCTTTGTTTTGTATACTGAAAACTGTTGTTATGCCCAGGTTG ..x...:..:.xxx....:..:......x........x...x.x.x....x:........xx.x..x.::xx:.::.x.xx:.......:.. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% -50896992 -43333410 +18451 chr4 + 190214555 1930607 1930606 1931936 1330 CCTTCTCCCGTTCCCACAGGTGGTAGCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGGCCCCTGTCCAGGCTGAAGAAGACTCTGGTAAACATAGCATTATGCTGATGTCCTCT-GCTTGGGTTGATGTGTGTAGT-GTAGCAAGCTGAGCTCTGATCTTGGAACCGTAGGGAAG--TGTGTCCAC--TCTCCCTGTTTCTGACCCGTGGGGTTTGGGCCAGCGGTCCAAG--TGCGTGTGGTCACAGTAAAAACAGCTTCTGCCATCTGCGTTTACTGGCTTAT-------GAGAGCTATTCAATGTAGTGCCTTCTG------GCCTGTGGCTCCCTTGCTCTCC---TACCCAAGTTGAGCAGCCACTGTGGTCACTGCTGCTGATGGGGCTGTGTGAAGAGAGGACACAAGAAGGA--------AGGGGAGGGAAGGTCGTCTCT-------------TGGATTCCA---GGCTTACATGATGTGGT-AGGGTCAGCCTTC------------AGGCCTGTGACTT-------------------CCGAGGAGGCAGCACTTT--TCTTGCTTCTGAGAGC--AATCCTCCTGGT-TTCGGCTGTAGTCTG--------------CACCTTACAGGGGTCCGGA-----------------------GTGTGGGCAGCTCCTGGC-------------------------TTGTT--------TGCCTGAGAGC-------TCAT---------AGGGCAAGAAGGGTGACTGG-ACTGACCTTGAATTCAGGTATCCTTTGGT--------CCTTCC---------TAGGCCTTCGGC---TTAAAAAAACCA----AAAGTGCTAG------------TTTGCTTTGGGCAGTGGCAAGAG-GAGGGAGAG---CTGACA--TTGTAAGATTTGAAGA----TGTGTAACAGTG---GTTAGATTTGTGATAAATATGTGCTTGGATGTAAA-----------TTGTGGAAAACTGAGA---TTTGAATGTAAAAA--TAACTG--ACATATTAGGGTATCAATTTAAAATTAAAAAAAAAAGTACTGTATATCTGAAGAGTCATCATTGAGGAGCTTTGGAGAGTCCAAACATAAAGTGTTTCAAGACTCACCTAAAGGGAAGTCGGGGCCCAGAAGCGAAAGGGTCTGGCCACATGTGC--------------------CTGCTG---------------------------------TCACCTTTCTCTT---TCTCAGATGTTTTCAT-CTTGAT--TTAGGTGTTTCTAGATCTCTTCATCAGCTATCT-----CATTAATCTTGAA-TTTGTTCAACTTCCTCAGTGTT-CATTGCAAATACTATAATTTAGA--------ATAGCAAGGATATTTAGGACTTGTAT--------------ATTTTCTTTAAAAGAAAATATACC----------TCACTCTATCAGTACAC--------TAAATTTAGAGACGTGTTCCT---TTTAAATGACTGGCTTATTTAAAAATGAGCCAGCTCTTCCTGAAGCCAGATTCAGCTTACCCT chr4 - 94230402 7967639 7967638 7969302 86261101 86261100 86262764 1664 CCTATTTCTGCATGTATAGGTGGTTGCTGAACATCCCGATGCATCAAGTGAGGAGATTGAAGAGTTGCTTGAATCGCAGTGGAACATGCTTAGTGAAAAACAGAAAGCTCGCTATAACACAAAGTTTGCCATAGTGACCTCTCCCAAATCTGAAGAAGACTCTGGTAAACGTAAAACTGTGCTAGTGTACTCTAACTAAATTTGATAAACATAGTGGTGTTAAACTAAGCACATATTTGAGACCTGTAGGGAAAACAGCTTTCACTGTTTTCCAAGTTTTAATTCTTGGTGTTTGTGCCAATAGCAAAGGAATGCCAATGGTTACAATAAAAGCAACCCATGAAGTCTACATTT-CTTGCTCATTGTTCTGAAAAGTTGTTATATGTAA-ACCTACTGTTTAGAGATTGCTGGTTTCTCATTCTTCTTTTGCCCATAAGCAGCTGCCATTGCATCCACTGCCTGTTATAGGTGGATGCTGGGAAGGGA-AAATGAAGTGTTAATACTAGTAAAATTAGAGTTGCCTTTTTTTAAAATAGAGTAGATAGTAAATGGCTTCAGGAGAGTGATCAGTGCTACACCTCTTCTTCGTATGAATACCTATAGTGTATTGCCTCATCATCATCAACTCAGGAAGAAGTATTCTGATCTTTATTCTGTATCCTTCATCCACTTGGCATTTTATTGTACTATGCAAAATTTGTAGGACACTATACAAGATTTCAAATACGTTTTTTTTCTCTTTTTTTCTTGTCGCTGTTGCCTAGCATTTGCATTTAATGATCAGTCTCAATTATTTTGCAAAGTATTTGAGGGTTGTGGAGTCATGTACTTGAGAAAGAAGGAAGGTAGTTTGGCATTTACATGGATTTTAGCAATTTTTTAGTAGTTATCACGTTTCAAATTTAAATAGTTTTTCAGCACTGTAAGAAGACAATGTGGAAGTATTAGAAATGAACAGGTGCTGCTTTGGGCAATGACAAGAATGAGAGTGAGTGTTTGAAAGTTTGTGAGACTTGGAAAAACTTGTATAAAAATGGCAGTCAGTTTTGT--TAACTATCTGTGTGTGTGTGAAATAACATAATTTTGTGGAAAATTGAAAAGTTTTTAACTTAAAAATTTAAGTGTCAAATATTTGGATATCAGTTTAA----AAAAAACCACATTCTGTATCTCTCAAGGTTCATCATTGAAGAATATTGGAGAGGCCAAACGTAAAGTGTTTCAAGACTCACCTAAAAGGAGATCAAGATCCAGAAGTAATTGAAATTTGTGTTGTGTGCAAATAGTTCATTATAAGTAGCTATTGAGTGTATTTTTTTATGTAATCGCCCACGTATCATAACCTCTTTATTTTATCTCAGATGTTGTCTTCCTTGACGATAGAATTTTAATGGATC-CCAAATTAAATATCTAAATGCTGTAGTGCTGAATTTTGTTCACCTTCCTCAGTGTCATATTGCAAGAAATGTAATTGAAATTGTACCTGTACCAGGTGTTTCTAGTACATATATGGTGTACAGTTATAGTTATCTACAGATGAAAACATGTCAATTGAATCGTTTCCCTACCCAAATCCTCTTCTCTTAAACTTGGAAGAATACTGTGGGATTTGTTTTACTGGCTT-TTTGTAAGTGG--CAGGTTCTCCTGGAGCCA-CTTCAGTCTGCTTT ...x:.:.:.:x:x:.:.......x.....:..:..x.....x...:.................:....::::..:.......::x....x.....:..:....:...x.....:.....x.........x.:...:..:..x:.x.:x.....................:..:x.:.:....::...x....-:..x::x.....:x:::....-..:x:..:..:...x.xx..:.x:..x.:........:--x.:x.:...--.:.:..x:x..:.:.::.x...x.....x....:::.:xx.:.--...xx:....:...:.....:..:.::x..xx:...:.:...-..x...:..-------:.:..:.:..xx.....:-:...x...------.x:..:x.x.::..:::...:.---.:....x:xxx...x....:..::x:......:xx.x..:..xxx:..:x::..::...-.x.x....x:--------..x::.:xx.::..:.:..:.-------------.:...xx:.---.....xx:x::x...:.-..x.::.xx.:..------------.x:...:.:::x.-------------------.:x....:.x..:.:.:.--....xx.....x:xx.--x....x.:...:-..:x::....x.x..--------------...:x....:.:x.:.::.-----------------------x...x.x::x:x...:..-------------------------..:..--------.:::....:.:-------....---------.::.x.:.....xx.x:...-.:.x..x.x..x..:..xx..::...:..--------.x..:.---------...x::...:..---x...:..:..x.----:....::...------------x:...........:..:.....:-...:.x...---:...x.--....:...:...:.:.----...:...x.:..---..:..x.....--...x...x..:x..x:...:..-----------..........:...:.---...x..:x......--...x..--.x.....x..:.....:.....----......xx.x:.x......x...x...:x..........:..::x........x......:.........................:...::..::.::.......::.xx.::x:.x.:xx::.....--------------------..::..---------------------------------.x....:.:.x..---...........x..x.-.....:--.x:::.x..xx.:....-.:xx..:.:x.....-----.xx..:.x:....-........x............:-:.......:x.x.:.....x.:.--------:..x..:.x:.x.:...x..x.:...--------------:..x...x:.:.x.....:..::.----------.:x.:...:.x:x.:x.--------....:..:..::x:.::.x:x---...:xx.x........-...:x..:..:--...x.::.....:.....-x.....::.:.::. 193M1I21M1I38M2I9M2I43M2I42M1D9M7I18M1D8M6I22M3I59M1D10M8I21M13I9M3I17M1I13M12I13M19I18M2I16M2I12M1I15M14I19M23I18M25I5M8I11M7I4M9I20M1I29M8I6M9I12M3I12M4I10M12I23M1I9M3I6M2I16M4I12M3I11M2D22M11I16M3I14M2I6M2I22M4D129M20I6M33I13M3I16M1I6M2I17M1D15M5I13M1I22M1I23M8I26M14I24M10I17M8I21M3I16M1D11M2D18M1D14M 873/1316 66.3% 1664/94230402 0.0% 362/1316 27.5% -6037032 -88193370 +3228 chr4 + 190214555 1934826 1934825 1934912 87 TGACAGAGCGAGACTCCATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAAA chr4 - 94230402 59607247 59607246 59607332 34623071 34623070 34623156 86 TGAAAAAACAATGCCTAATATTAAAAGGAAAAATCCTGACAGAAAAAAAGAAA-TGTGTATATACATATATCAATATATATAGAAAA ...x.:.:.:.x:.::x..x......::.....xxxx:.x.:.......:...-.:.:......:......xx.........x.... 53M1D33M 60/86 69.8% 86/94230402 0.0% 1/86 1.2% -57672421 -36557981 +3107 chr4 + 190214555 1934862 1934861 1934914 53 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAAAAA chr4 - 94230402 69437739 69437738 69437790 24792613 24792612 24792664 52 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGTAA .........x........:x...................x.-..:....:x.. 41M1D11M 45/52 86.5% 52/94230402 0.0% 1/52 1.9% -67502877 -26727525 +11877 chr4 + 190214555 1935077 1935076 1935286 210 TCACAGTGCTTCAAATGCAGCTTTTGGAGTGGTTTTCATGTACATTTTCCCCATTCCCCATTCCAAGGTAATGTAAATGGGAAAAAAAGAAACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGGTAATTGTGTTCCAGGTTTGCTTG chr4 - 94230402 7970257 7970256 7970466 86259937 86259936 86260146 210 TCAAAATAATTTGAAAGTGGGTTTTAGATTATTTTTCATGTAAGTTTCCCCCATCCCCCATCCCAAGGTAACTTACATGGAAATAAAAGAAACCAAAAAAAGAGGACAAAGGAACCTACAGAAGATTTTGAAGTTCAGGAGGCACCTAGGAAAAGACTCAGGATGGATAAACAGAATAATCGGAAGGTAATTATGTTGTTGGTTTGTTTG ...x.:.:x..::..x.::.x....:..x.:x..........x:...:......:......:.........:x..x....:..x...........x.x........:.x....x............x:.....:.x....x:....:................:...:..:..x.:.xx.............:....x:x......:... 210M 162/210 77.1% 210/94230402 0.0% 0/210 0.0% -6035180 -88195222 +3238 chr4 + 190214555 1938356 1938355 1938438 83 TTTCCTTTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTT--TTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 39145484 39145483 39145568 55084835 55084834 55084919 85 TTTCTTTTTGCAGTTATTTTTTCATATTTAACATCTTTCTCTTTTTTTTTGTTGTTTTCTTTCTTGAATGGTATTTCTTTTTTTT ....:.....:x...x.....::x.x...xx.x.:...:......:...--..x...........xxx.xx.x...:........ 49M2I34M 61/83 73.5% 85/94230402 0.0% 2/83 2.4% -37207128 -57023274 +3133 chr4 + 190214555 1938359 1938358 1938442 84 CCTTTTGTTG--TTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 73032473 73032472 73032558 21197845 21197844 21197930 86 CCTTTTATAAACTCCTGTTGCTTTTTCCTTGCTGTTTTTCTTTTCTTTGTTTTGTTTTCCCATCTTCTCCTTGTCTATGTTCTCTA ......:.x:--.:..x..x......::..x..x..............x....x.:..:.:x.:..:.::..x.:.x.x..:.:.. 10M2I74M 58/84 69.0% 86/94230402 0.0% 2/84 2.4% -71094114 -23136288 +3133 chr4 + 190214555 1938362 1938361 1938443 82 TTTGTTGTTCTTTTTCTTTTTTTTTCCTTTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 - 94230402 41570557 41570556 41570638 52659765 52659764 52659846 82 TTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAA ...:....:...:.x..........:....:.......xx...x:x:xx:::x...::....::.xxx..:...:...:... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -39632195 -54598207 +3001 chr4 + 190214555 1938398 1938397 1938452 55 TTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAATAATAGAG chr4 - 94230402 15704874 15704873 15704928 78525475 78525474 78525529 55 TTTCTCCTTTCTTTCTTCCTTTTATTTTTTTTGCTGTTTCCTGTGAATAATGGGG .....::...:......:.....x........x:.x...::.x.:......:.:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -13766476 -80463926 +7241 chr4 + 190214555 1938409 1938408 1938545 137 TTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAATAATAGAGAGACACAATCACTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGGTAATGTGGTCAG chr4 - 94230402 7973442 7973441 7973576 86256827 86256826 86256961 135 tttttttattttttctttttttattttttttttG--TGACAGAGGGAGACAAGCAATGACAAAACAGCAAAAACAAACTCTACTAAGGTCACAGAAACCTCCTCTTCACAAAAGAACCAGTCAGGTAATGTGGTCAG ...:...x......:.......x..........:--.:.:....:..x....x..x.........:..x.:.....:....xx:....:..::..::.xx....:..:.xx....:....x................ 34M2D101M 104/135 77.0% 135/94230402 0.0% 2/135 1.5% -6035033 -88195369 +13710 chr4 + 190214555 1939567 1939566 1939794 228 CTTCACTTATTTGAGGGGTAATTTTTAA--GCAGTAAAAAGATCAAGGGTTTATGATTTGAAACTTTAC-----AAACCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTAAAATAATAATAAT chr4 - 94230402 7974441 7974440 7974674 86255729 86255728 86255962 234 CTTCTTTTATCTGAAGGAATATTTTAAATGGCTTCAGGGAGAT-AACGTTTTAAAGTTCCAAACTTCACTTTGTAAACCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATGCATGTAAACCTCTGAAGAAGCGAAATCGGGCTTCAGCAGCAGAATCTTCAACTCTTGCTTTTAGCAAAAGTTCATCTCCTTCAGCTTCCTTAACTGAGAATGAGGTAAAAAAAAAATGGT ....x:....:...:..:xx.....x..--..xx:.:::....-..x.x....x::..:x......:..-----...................................................x.......................x:.:....x.......:......xx.......................x..x........................x..x...::. 28M2I13M1D25M5I161M 191/227 84.1% 234/94230402 0.0% 8/227 3.5% -6034874 -88195528 +9459 chr4 + 190214555 1951061 1951060 1951219 159 TTCATCTCTAGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGGTGAGGAGAAGGCAGC chr4 - 94230402 7987261 7987260 7987418 86242985 86242984 86243142 158 TTAATCTTCAGATCTTCGATGGCCCAGGAGATGAGCGCTCAGAGTCTCCCTATGAAAGCGCTGATGAAACTCAGACTGAAGTGTCTATCTCATCCAAAAAATCTGAGCGAGGAACGGGAACAAAAAAAGAATATGTGTGTCAGGTGA-GAGACGGCAGC ..x....::..:...:x..::....:.....:....x...:.....:..x..:.....:..x..:.....x..:........:...:.............:............::.:xx:.x.....:..:........:.......-....x...... 147M1D11M 124/158 78.5% 158/94230402 0.0% 1/158 0.6% -6036200 -88194202 +11101 chr4 + 190214555 1953304 1953303 1953527 224 CTTCTTTAACTTTT--TGTTAGGGATTCACTCATGTTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCGCTGTGTGGTAACTCAGTGTGGAAAATTTTACCATGAGGCTTGTGTGAAAAAATACCCTCTGACTGTATTTGAGAGCCGAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA chr4 - 94230402 7989500 7989499 7989725 86240678 86240677 86240903 226 CTTTTATTACTTCTGCCACCAGGTGTGCATACCTGCTTTGTGTGTAAAGAGAGGAAGGCAGACCTGAAGCGCTGCGTTGTATCCCACTGTGGAAAATTCTACCATGAGGCCTGTGTGAAGAAATTCCACCTGACCGTGTTTGAGAGCAGGGGTTTTCGGTGTCCTCTGCACAGCTGCCTCAGTTGTCATGTTAGTAACCCCTCCCATCCACGAATTTCAAAAGGTA ...:.x.x....:.--::::...x:.x..:x.x..:..:..............x...:....:x.x........:..x...x.:..x...........:...........:........:....x..x:.....:..:.........x.:.....:..x..:..:..x........:x.x..:..:....:.xx:.....:..xx.:...x.:x:x.......... 14M2I210M 165/224 73.7% 226/94230402 0.0% 2/224 0.9% -6036196 -88194206 +10529 chr4 + 190214555 1955141 1955140 1955344 204 GTGTGTTTCTTTGCCTTCAGGTAAAATGATGCGGTGTGTCCGCTGCCCCGTTGCCTATCACAGCGGGGATGCTTGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTTCGTGTGCTCCAAAGGTGA chr4 - 94230402 7990395 7990394 7990595 86239808 86239807 86240008 201 GTGTTCTGCTTTGCT---AGGAAAGATGATGCGCTGTGTTCGCTGTCCTGTTGCATACCATGCTGGAGACGTGTGCATTGCTGCGGGATGTGCAGTCATCGCTTCCAACAGCATTGTTTGTACGAACCATTTCACTGCCATGAAAGGAAAAAGTCATCACGCGCATGTCAATGTGAGCTGGTGCTTTGTGTGTTCCAAAGGTAA ....x:.x......:---...x..:........x.....:.....:..:.....x..:..::x:..:..:.:x..:x.x..x..:.....:x....x.....:...........::.:..:..x:x...:........:xx...:..:..:x.x..:.....x..:.....:..............:.....:.........:. 15M3D186M 149/201 74.1% 201/94230402 0.0% 3/201 1.5% -6035254 -88195148 +11264 chr4 + 190214555 1955682 1955681 1955877 196 TCCTCTTG-CAGGGGGGAGCCTTCTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGGTGTGAGACATAGAATCGTATGCTTTTA chr4 - 94230402 7991599 7991598 7991794 86238609 86238608 86238804 196 TTCTCTTGGAAGGAGGAAGCTTGCTGTGCTGCGAGTCCTGTCCTGCAGCGTTTCACCCGGACTGCTTAAACATCGAAATGCCAGATGGGAGCTGGTACTGCAATGACTGCAGGGCGGGGAAGAAACTCCATTTCCAGGATATTATTTGGGTTAAGCTGGGAAATTACAGGTCTGATGAA-AGATTTGTTTTCTCTTA .:......-x...:..:...:.x........:........:..x..:..x..:.....x......:.:........:.....x..:..x.......x..................x........:..x..:...........:........x..:..x..:..:.......x...x:x.-...x.:..x.x..:... 8M1I170M1D17M 156/195 80.0% 196/94230402 0.0% 2/195 1.0% -6035917 -88194485 +15156 chr4 + 190214555 1955959 1955958 1956199 241 TCCTGTTTTTAATATTTATAATAGATGGTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGATTATTACTGGACGCATCAGGCGCGAGTGTTCCCGTACATGGAGGGGGACCGGGGCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAGTCTTCAAAAACGGTACGGAGATA chr4 - 94230402 7992528 7992527 7992767 86237636 86237635 86237875 240 TTCTATTTGTATT-TCTGTGCTAGGTGGTGGCCTGCTGAAGTTTGCCATCCGAAAAACGTTCCCCCAAACATCCAGAAAATGAAGCATGAAATCGGAGAATTTCCTGTGTTTTTCTTTGGTTCTAAGGATTACTTTTGGACTCACCAAGCACGGGTGTTCCCTTATATGGAGGGAGACAGAGGGAGTCGATACCGGGGGATTAAAGGAATTGGAAAAGTCTTCAAAAATGGTACGTAGCTA .:..:...x..x.-.:.:.:x...:........x..x..............x.....:...........:..:..............:..:..:........:.................x.....:.....:.x:.....x..:..:..:..:........x..:........:...x.:..x..:..x....:....:.:.:...:..:....:............:......x..x.. 13M1D227M 193/240 80.4% 240/94230402 0.0% 1/240 0.4% -6036569 -88193833 +3067 chr4 + 190214555 1957245 1957244 1957322 78 CTTTTGTTTCGAGAGGAGCTCAGCTGCATGTTTTTTTGTTTTTGTTTTTTTTTTTTTGAGACTGAGTCTTGCTCTGTT chr4 - 94230402 65740982 65740981 65741051 28489352 28489351 28489421 70 CTGCTATTTTCAGGGGAGAT--------TTTGTTCTTGTGTTTGTTTTTTTTTTTTTCAAACCAAGTCTTGCTTTCTT ..x:.:...:x..:....x.--------.x.x..:....x.................x.:..::.........:.x.. 20M8D50M 53/70 75.7% 70/94230402 0.0% 8/70 11.4% -63783737 -30446665 +7679 chr4 + 190214555 1957916 1957915 1958051 136 TTTCATTGACTTTTTAGCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACATCAAGGTGGCGTGTGGGAGC chr4 - 94230402 7993189 7993188 7993324 86237079 86237078 86237214 136 TTTCTTTTTTTTTTAAGCTTTGCAAGAAGCTGAAGCTCGATTTCGAGAAATAAAGCTACAGCGAGAAGCCAAAGAAACCCAAGAAAGTGAACGTAAACCTCCCCCATACAAGCATATTAAGGTAAAGTGTGAGGAC ....x..xx:....x...x:...................x.....x.....x.....x...x.:......x:......x..:..:..:..:..:..:..:..x...........:..:.....::x.....:.::. 136M 104/136 76.5% 136/94230402 0.0% 0/136 0.0% -6035273 -88195129 +17998 chr4 + 190214555 1959468 1959467 1959759 292 CAGGTGAATAAGCCTTACGGGAAAGTCCAGATCTACACAGCGGATATTTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGATGAGAATCCTTGTGGCTTTGATTCGGAGTGTCTGAACAGGATGCTGATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAAGATCATCAAGACAGATGGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGTATGTGTCGTTATCCCCT chr4 - 94230402 7993566 7993565 7993857 86236546 86236545 86236837 292 CAGGTGAATAAGCCTTGTGGTAAAGTGCAGATATATACGGCTGACATTTCTGAGATTCCCAAGTGCAACTGCAAGCCCACAGATGAAAACCCTTGTGGCTTTGACTCTGAGTGCCTCAATCGGATGTTGATGTATGAATGTCATCCACAAGTTTGTCCAGCAGGAGAACGATGCCAAAACCAGTGCTTTACAAAACGTGAATACCCTGAGACAGAGATCATCAAAACAGATGGGAAAGGGTGGGGTTTAGTTGCAAAGAGGGACATTAAGAAGGTATGAATCATTCTTGCCT ................::..x.....x.....x..:..:..x..:.....x..:..:..:..........................:..:..............:..x.....:..x..:x.....:......x...:..:..:..:..:..x.....x..:..x..::xx.....:...........:..x..:..:x.:.....x.....x:..........:........x...........::.:..:..x...........:.::........x:..:..x.:x... 292M 230/292 78.8% 292/94230402 0.0% 0/292 0.0% -6034098 -88196304 +8570 chr4 + 190214555 1961024 1961023 1961154 131 GTGATTTCCAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATGGCGAGAATCAAGCACGCACACGAGAACGACATCACCCACTTCTACATGCTCACTATAGACAAGGTA chr4 - 94230402 7993923 7993922 7994053 86236350 86236349 86236480 131 GTATCTTTCAGGGAGAGTTTGTGAATGAGTATGTTGGTGAGCTCATTGATGAAGAGGAATGTATGGCAAGAATCAAATATGCACACGAAAATGACATTACTCACTTCTATATGCTTACTATTGATAAGGTA ..:x:..:........:.....x..:.....:.....x.....x..:..:..:.....:..:.....:........::.:........:..:.....:..:........:.....:.....x..:...... 131M 104/131 79.4% 131/94230402 0.0% 0/131 0.0% -6032899 -88197503 +14173 chr4 + 190214555 1974628 1974627 1975007 380 CCTCCCCGGCGCTCACTAAGGCTCGGTCCTCTCCACGTGGTCCTGACCTGTCCT------CTGTGAGCAAGAGAAACAGGACTGGTTTGGGGGTGTCCTGTCTCAGTGGACACAGGACACCACGGTTTTCAGTACAACAAGGAACACAACTTGTTCAATGTGCTTTA--------TGATGGTGAAA----ATTCCCTTTAAAAATAA-------CATGCGATTGCTAACACTTGACCGAATATATCACTTGACCTTACAGGACCGTATAATAGACGCTGGCCCCAAAGGAAACTACTCTCGATTTATGAATCACAGCTGCCAGCCCAACTGTGAGACCCTCAAGTGGACAGTGAATGGGGACACTCGTGTGGGCCTGTTTGCCGTCTGTGACATTCCTGCAGGTA chr4 - 94230402 7995026 7995025 7995402 86235001 86235000 86235377 377 CCACCAGAGTGCTCACAAGAACACTTATCCTGCCACGTGGCTGAGATGGGTTCTGGGACAATGTGAGCTAGATCAAGAGTATTGCTTTGGGAGTGTCTCATTTCAGGACCCATGGGGCACTACAGTTTTCAATACAACACGTAACA--------TCGATTTACTTTGACTTTTCTGGGTAGCCAAACCATGTCTGTTTTGAAAGTAAAAACATTCATTCTGTTGCTGAT-------------------TTGATCTC-CAGGACCGTATTATTGACGCTGGCCCCAAAGGAAACTATTCTCGTTTTATGAATCACAGCTGCCAACCAAATTGTGAAACTCTAAAATGGACGGTAAATGGAGATACTCGTGTTGGCCTGTTTGCTGTGTGTGATATTCCTGCAGGTA ..x..xx:.:......x.:::.x.xxx:.::x........::xx..:xx..:..------x.......x...xx..x..x.:..x......:.....:::.:....x:xx..::..:...:..:.......:.......x.x....--------..:..x.:....:--------x.:.:.:x...----:.::x:...:...:...-------...x.x:.....:.:-------------------....:..:-...........x..x.......................:.....x....................:..x..:.....:..:..x..:.....:..:.....:..:........x...........:..x.....:............. 54M6I86M8D13M8I11M4I17M7I15M19D8M1D148M 260/352 73.9% 377/94230402 0.0% 53/352 15.1% -6020398 -88210004 +8711 chr4 + 190214555 1975286 1975285 1975405 120 TCTCCCAGGGACGGAGCTGACTTTTAACTACAACCTCGATTGTCTGGGCAATGAAAAAACGGTCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGGATAGACCAAAGGTAAG chr4 - 94230402 7996039 7996038 7996158 86234245 86234244 86234364 120 TCACTCAGGGACAGAGCTGACTTTCAATTACAACCTTGACTGTCTGGGCAATGAAAAAACAGTCTGCAAATGTGGTGCCCCAAACTGCAGTGGATTTCTTGGGGACAGACCAAAGGCAAG ..x.:.......:...........:..:........:..:....................:......x::.....x...:.x..:...........:..:.....:..........:... 120M 101/120 84.2% 120/94230402 0.0% 0/120 0.0% -6020753 -88209649 +11005 chr4 + 190214555 1976457 1976456 1976685 229 CTTAATTCTTGACTCTAGACCTCGACGACCCTTTCATCAGAGGAAAAGGGCAAAAAGACCAAGAAGAAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGTGGGT chr4 - 94230402 7997218 7997217 7997441 86232962 86232961 86233185 224 CTTAATCTTT-----TAGAACTCTTCCACTAATGCCTCAGAAGAAAAAGGCAAAAAGACCAAAAAGAGAACACGGAGGCGTAGAACAAAAAACGAAGGGAAGAAAGAATCTGAAGATGATTGTTTCCGTTGTGGTGATGGAGGCCAGCTGGTGTTGTGCGACAGGAAATCCTGTACTAAAGCCTATCATCTCTCCTGTCTTGATTTGGCGAAACGTCCTTTTGGTGAGT ......::..-----....x...xx.x..:xx.x.x.....:.....:..............:....:...:x..x....:...:.....::x..........::x.:..x..:..:..x..:.....:..:........x..x.........:....:...x.x..:.:...:..:..:.....:..:..x.....:..x.:::.x.xx..:..x..:..:....:.. 10M5D214M 163/224 72.8% 224/94230402 0.0% 5/224 2.2% -6020761 -88209641 +15626 chr4 + 190214555 1978622 1978621 1979224 603 TTGTGTTCTGTTGCAGGGAAGTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTACTGCTGTGAGCATGACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCCCCCAGAGCCAGGGAAGCCGAAGGGGAAGAGGCGGCGGCGGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTGCAGGGCGGCCGGCCCTGCCTGCGGGAGAGG--GCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGGACACAGA---CGTACAGGCCTCC----TCGGGAGGGAGCGCCTCCCCA-------------------------------------CCACTGAGCCATCCTCAGCAG-CGTCCGCTGCGTCTGCACTGATGACCGTCTGAGCCCAGCTCAG--CGTTCCTGGACAAA-CAGCCTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGT-CAAGGTTCCCTCCCACTCTATTTTTTTAGGTTAAAGTTA chr4 - 94230402 7998471 7998470 7999081 86231322 86231321 86231932 611 TTGTTTTCGGTCATAGGGAAGTGGGAGTGTCCTTGGCACCACTGTGATGTTTGTGGCAAACCTTCTGTTTCATTCTGCCACTTCTGCCCGAATTCTTTTTGCAAGGAACACCAAGATGGGACAGTACTAAATTCTACGTTGAATGGACAGTTATGCTGCTCTGAACACGTTCTCGGGGTGGATTCTGTTGAAACTCAGAAGACTGAGAAACCCCGCAAAAAACTGAACAAGTTGAAGCCTAAGAGAAAGGAGAGGAACAGATGGATGAGAGCC---GAATGCAAATAGTCATGGACTGCAGTT----------------------ACTACTGCCAACACTATCTTGTAGATAAGTTGTGAATATTACCAGG---GAAGGACACAATTT----------TACATATATTCTGTAAAGGTTACAGGGGTGGGGGGGGAGGGATTttttgttttgtttcgtttttgtttttgttttgttttATAAATCCACTGAGCCAACCACAGCAGTCTTCTGCTGCTTCTGCACTGATAACGAACT--ACATAGTTCAGAAAATTTCAGGACAAACCAAACTTATTACTCAGCATTACAGTTACACTTGAATTGTTACGAATGTATAAGGTTTCCTCCAA---TATTCTTTCAGGTTGGAGGTA ....x...x..:::............:...........:..:.....:..x..............x::......:......:.......x.....x..:..:.....:.....:..:.......:x:.x.::.x:..x::.:.:..:.:..:x.:.....x...:..:.x::.x....:..xx..x..:::..x:xxx...........:....x.xx.:.:.::::x...::....xxx.....:x:.x:.x...:x:.x...xx.....:.---..:x........:xx::.:.x..x.:.----------------------.xx:.x...::.x..::..xxx:..x.:.--.:..::..x.x.x..---.:.....x..::.:----------x...:.x.---:...x...::x.x----.x...:.....x.x:.:::::-------------------------------------...........x..x......-.x..:.....x...........:..x:x..--:.x:..:....--x:..:.x.......-..:x..:.:.x......:....x.::...........x:.x.......-:......:.....x.---....:...:.....::..x.. 273M3D27M22D29M2I15M3D14M10D8M3I13M4I21M37I21M1I30M2D11M2I14M1I48M1I15M3D21M 379/560 67.7% 611/94230402 0.0% 94/560 16.8% -6019849 -88210553 +4041 chr4 + 190214555 1982724 1982723 1982830 107 TTCTTTAGAAAAGCTCGACTTTAATGGTTCAGATAGTTTTACAATGAAAATAGGTACCCAAAGAC----TGTCTTAAATGTCCACAACTATACAAAAGATGAATACAAAAC chr4 - 94230402 8020582 8020581 8020690 86209713 86209712 86209821 109 TTCCATAGAAAATCTAAATTTTTATTATACATACTGTATTACACTGAAAATACGTACCCAAAGACAGAATATTTTGAATTT--ACAACTGTACAAAAAAAAAAACCCAAAC ...:x.......x..x:.:...x..x:.x..x.:x..x.....x........x............----.:.:..:...x.--......:.......:.x:..xx.x.... 65M4I12M2D28M 78/105 74.3% 109/94230402 0.0% 6/105 5.7% -6037858 -88192544 +10819 chr4 + 190214555 1983317 1983316 1983512 196 TTCTAGGACACATTGGTCATGGGCTTGTACTTCTTGAAGCGCGTCCACTGGCCCGTGGCATAGTTCATCTCAAACACTGTGTCCACCAGCATGGTTGTGCTACCCTGGCCGTCCGCCTTGGGCAGGTCCTCCGTGTGCTCGCTCAGCTTGATCTGGATCACGTCCCCCTGCTCCTGGCACGGGTTCTCTGCAGAGA chr4 - 94230402 8024543 8024542 8024738 86205665 86205664 86205860 196 TCTTAAGAAACATTAGTAATAGGTTTGTACTTCTTGAATCTGGTCCATTCACCAGTAGCATAGTTCATTTCAAAGACTGTATCAACCAACATAGTGGTGCTGCCAGTGCCATCCGCCTTTGGTAAATCTTCTGTATGCTCACTAAGTTTAATCTGAATGATGTCACCTTGCTCTTGGCAAGGGTTCTCTGTGAAAA .::..:..x.....:..x..:..:..............x.xx.....:.x:..x..:...........:.....x.....:..x....:...:..x.....:..xxx...:........x..:.::..:..:..:.....:..x..:..:.....:..x.:...x..:.....:.....x..........:::.:. 196M 146/196 74.5% 196/94230402 0.0% 0/196 0.0% -6041226 -88189176 +6973 chr4 + 190214555 1983590 1983589 1983704 115 ACATACCTCGGGAGCCGGCCATGAAGCCCAGGATGAGGGCCTTCTCGGGCCGCGTGACTTTGTTGGCCGTCTTGAACATCTCCTGGGCAGCGAACATCTGCTCTCTCTACAGCGG chr4 - 94230402 8026249 8026248 8026363 86204040 86204039 86204154 115 ACATACCTCTGGATCCTGCCATGAATCCAAGTATAAGAGCCTTTTCTGGCCTTGTAACTTTGTTTGCAGTCTTGAACATTTCCTGTGCAGCATACATTTGCTCCCTCTGCAACAG .........x...x..x........x..x..x..:..:.....:..x....x:..:........x..x...........:.....x.....:x....:.....:....:..:.:. 115M 91/115 79.1% 115/94230402 0.0% 0/115 0.0% -6042659 -88187743 +7204 chr4 + 190214555 1984804 1984803 1984996 193 TCACCTGGGGGCGTCTCGGAGCTGGGGATGTAGGAGGAGGCGGGAACCACGCTGGGCGTGGAGGGAAGGTAGCTCGTGGAGGGCAGCGCAGGCTCATTGTTCAGGGACCCAAGTTTCTG--GAACACAGAGTT-----------TAAGGTTCCTTC----------CAGAAGAGGCCATGCTTCCGGCATGTGCTAACACATGGCCCGACCCGGAG chr4 - 94230402 8029600 8029599 8029812 86200591 86200590 86200803 213 TTACCTGGCTGTGTTTCAGAACTTGGGATGTAAGAGGAAGATGGCACCACACTGGGAGTAGCAGGTAAATAACTCGTAGAAGGTAGTGCTGGCTCATTGTTCAGTGAGCCAAGTTTCTGTAAAACACAAAAGTGTTATGCCTGGTAAAGTACCTACAGAAAGAATGCAAAGAAGGCC---TCTGTGACATGTGCACAAAGAAGGCCTAACCAGAAG .:......xx.:..:..:..:..x........:.....:.xx..x.....:.....x..:.x:..x.::..:.....:..:..:..:..x..............x..x...........--:......:.:x.-----------...:..x...x.----------..:.::.....---::.x:.:.......xx.x.x.x....::...x.:.. 119M2I12M11I12M10I11M3D36M 137/190 72.1% 213/94230402 0.0% 26/190 13.7% -6044796 -88185606 +8147 chr4 + 190214555 1986112 1986111 1986408 297 ACCGAGAGTCTTCCTTCTCCGCTTCGCCTCTCGGCCAGCGCCAACCATATCCAGCTCAGAGATGTCCAGCAGCTGCCAAGACAAGCACAG---------------------------------------CCCTGCCTTAGT-------------------------------GACGGCACCAGGG-----CGCAACGGGCCCCGGGGTGCCACAGGAGCTGGGGGACGGGCCTACCTTCACACCTCGTTCCTTCCGCAGCAGCGTCCTGGAAGGCGGGATGGGGGTCCGGTTCCCTGTGGGGCTGAAGACGCTGGGCGCCGTGGGGCTTCTGAAGGGCGCCTGCTTCGGGATGCCTTTGAGTGGGGCTGGAG chr4 - 94230402 8031650 8031649 8032021 86198382 86198381 86198753 372 ACCTAATGTCTTCCTTCTTCTCTTTGCTTCACGGCCAGCACCTACCATATCCAGCTCAGAGAATTCTAAAAGCTGAAGAAAAGAGTGCAGAATCTTAGCAACAGCAATATAAATTCAAACTATCTCAATACTATCCTTAGTTTTCTCTTTAACATGCTGATGCTTGATTCAAAACAGCACCAAAAGTTATTAAAATAACTTTTTGGGGAGGAGAAGTGATTAGGAATTCACCTACCTTTACTCCTCTTTCTTTACGCAGAGGTGTTCTTGAAGGAGGAATAGGATTTCTGTTTCCAGAAGGGTTAAATACACTCGGTGCTGAAGTACTCCTGAACGGAGCTTGTTTTGGTATTCCTTTGAGTGGTGCTTAAG ...x.:x...........:.x...:..:..x........:..x...................xx..:.:x.....xx:.:.x:..::...---------------------------------------x.:xx.......-------------------------------:..:......:::-----::x..:::x::::x...x:xx.x.:.x.x.x:..:.:xx:........:..x....x...:..x.....x:.:..:..x.....x..:..:..:x.:.x...:..x.x:...:.:..x..:..x..:..:.x:.x:..:.....x..x..:..:..:..x..x...........x...x:.. 90M39I12M31I13M5I182M 195/297 65.7% 372/94230402 0.0% 75/297 25.3% -6045538 -88184864 +10283 chr4 + 190214555 1989700 1989699 1989873 174 CCACTCACACTTCTGCAGCAGCTCCGCCCGCAGCGTGGCGCTCTTGGGTTTCCGCTTTAACTGAAAATGCTTCACCGGGGGAGTGAGGGGTCCCGCGAGGGTCGTCAGGGCGTTTTTGTTCAAGTACTGGCACTCCAGTGGCAGCATGGCAGACGCTTCACACTCACCCACTGC chr4 - 94230402 8035774 8035773 8035947 86194456 86194455 86194629 174 CTACTTACACTTCAGCAAGAGTTCAGCTCGGAGAGTGGCACTTTTAGGTTTCCTTTTCAGCTGGAAGTGTTTCACTGGGGGGGTAAGTGGCCCCGCTAGTGTTGTCAAGGCATTTTTGTTTAAGTACTGGCATTCCAACGGCAACATAGCTGATGTTTCACCTTCACTTACTGC .:...:.......x...:x..:..x..:..x..x.....:..:..:.......x:..:.:...:..:..:.....:.....:..:..x..:.....x..x..:....:...:........:...........:....::....:...:..x..:.:.....x:....::..... 174M 131/174 75.3% 174/94230402 0.0% 0/174 0.0% -6046074 -88184328 +11365 chr4 + 190214555 1991538 1991537 1991728 191 ACATACCCTTTTCTCTAAGTTCTCCCAAAATATCCTGAACGTTGGGATTCTGCTCCTCCAGCTCCAGGTTAAGCGAGCCTGTGTCCGGAAAGGACTTCAAGATGTCGGCGACCATGAGCACCCAGGGGTCCGAGTCGAGGCTGGCGAGCTGGATGATCTCCATTAGGGCGCCCTTCATCT-GCAAAATAGGA chr4 - 94230402 8037454 8037453 8037645 86192758 86192757 86192949 192 ACTTACCTTTTTCTCTAAGTTCTCCTAAAATATCTTGAACATTGGGATTCTGTTCTTCAAGATCAAGGTTAAGGGAGCCAGTATCTGGAAAGGATTTTAAAATATCAGCTACCATTAAGACCCAGGGGTCTGAATCCAAGGTAGCGAGCTGGACAATTTCAGTCAGTGCCCCCTTCATCTAACAAAAGAAGA ..x....:.................:........:.....:...........:..:..x..x..x........x.....x..:..:........:..:..:..:..:..x.....x.:x...........:..:..x.:.x.:..........::..:..x:.:..x..x..........-:.....x.:.. 180M1I11M 151/191 79.1% 192/94230402 0.0% 1/191 0.5% -6045916 -88184486 +16729 chr4 + 190214555 2008745 2008744 2009044 300 CTTACCTCGTCCACCGTGCGGCGCGGGAGGTGCAGCGTCCCGAGTAGCAACTTGAGCTTCACTGCCGACGAGAGGCCATGGAAGCAGAGACGGATGTTGTCGATGACCGCGGCCGTGAGCAGGGACGCGATGCTGGGCGGCGCCCACAGCTCGTCCGTGGCCCCCAGCTTGTTGTGCAGCCACAGGCCCGTGTCGCTCTCCCGCATGGACGCCATCTTGGGGG----------AAAGCGCGCGCCGCTGCCCCGGCATCTTATGAAGACACCTA---------------------------------CGCGTC----CCTCGCTAGGACCCCAACATGGCGGCGCCC chr4 - 94230402 8043222 8043221 8043567 86186836 86186835 86187181 346 CTCACCTCATCCACCGCCCGGCGGGGCAGGTGCAGCATCCCTAACAGCAGCTTCAGCTTGACGGCCGAGGAGAGGCCGTGAAAACAGAGGCGGATGTTGTCGATCACCGACGCCGTGAGCAGCGAGGCGATGCTCGGCGGCGCCCACAACTCGTCCGTGGAGCCCAGTTTGTTGTGCAGCCACAGGCCGGTGTCGCTCTCCCGCATCGACGCCATCTTGGGAGCAGAGCGAAAAAAGAGAGGGTT-CTCCACAGGCATTTTATGTAGACACCTAAAGGAGGAAGGGGGGGGGAGGTGAGGACCCCTGCGGGTCGCCGGCTTGTTCGTAACCCAAAATGGCGGCGCCC ..:.....:.......:x.....x..x.........:....x.::....:...x.....x..x.....x........:..:..:.....:..............x....xx...........x..x........x.............:...........xx.....:....................x.................x..............:.----------....x.x.x.::-..x.x.x.....:.....x.........---------------------------------..x...----x..:.:.x.x.x.....x............ 223M10I12M1D28M33I6M4I30M 249/299 83.3% 346/94230402 0.0% 48/299 16.1% -6034477 -88195925 +4135 chr4 + 190214555 2011841 2011840 2011919 79 CTTCAGCCTCTACCTCCTGCGTTCAAGTAATTCTCATGGCTCAGCCTTGCAAGTAGCTGGGAATACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..x.....:xx.x..:...x........:x...x..x...........x...........:.x....--.:........ 67M2D10M 62/77 80.5% 77/94230402 0.0% 2/77 2.6% -16185285 -78045117 +3654 chr4 + 190214555 2013612 2013611 2013678 67 CTGCAGCCTCCGCCTCCCAAGCTCAAGCGATTCTCATGCCTCAGCCTTTCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.....:xx:x..:.:::.:.....:.x...x..x.x.....................:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -16183514 -78046888 +3056 chr4 + 190214555 2018072 2018071 2018118 47 AAAAAAAAAGAAAGAAAGAAAATGAAAAAAAAAAAGAGATGGAAAAG chr4 - 94230402 3442108 3442107 3442154 90788249 90788248 90788295 47 AGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAAAAGG .::.......:.....:.....x...............:.x:...:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -1424036 -92806366 +3011 chr4 + 190214555 2019705 2019704 2019778 74 AAAAAAAAAAAAAAGAAAAGAAAAGAAAAATTAATTCCTAAAGGATTCCTTTATCAAATAAAAATGGGAAAACG chr4 - 94230402 25339702 25339701 25339775 68890628 68890627 68890701 74 AAGATAAAGTAAAAGAAAAAAAAAAAAAAAGCAATTCATAGAAAATGAGACCAGGAAACAAAAATGTGAAAATG ..:.x...:x.........:....:.....x:.....x..:.::..xxxx::.xx...:.......x.....:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -23319997 -70910405 +3183 chr4 + 190214555 2020254 2020253 2020360 107 TTCCTTCCTACCCTCTTCTTTTTCTTT--TTCTTTCTCCT-----TCCTTTCTTCTTTCTTTTTCTTTCTTTCTTTTCTTTCTTCTTTCCTTCCTTCCTCCCTCCCTCTCCCTT chr4 - 94230402 62872334 62872333 62872447 31357956 31357955 31358069 114 TTTATTCTGGCAATCTTATTATTCTTAAATTCTTTGTCATATATGCACTCTCATGTTTCCCTTCTTTCCCAGCTCTTCTTGCCTCTTCCCTCCCTTCCTCTCACTTTCCCCCCT ..:x...:x:.xx....x..x.....x--......x..x.-----:x..:..x.x....::..::..:.:xx..:.....x.:....:...:........:.x.::..:...:. 27M2I11M5I69M 71/107 66.4% 114/94230402 0.0% 7/107 6.5% -60852080 -33378322 +4589 chr4 + 190214555 2020268 2020267 2020419 152 CTTCTTTTTCTTTTTCTTTCTCCTTCCTTTCTTCTTTCTTTTTCTTTCTTTCTTTTCTTTCTTCTTT--CCTTCCTTCCTCCCTC--CCTCTCCCTTTCTTCCTT-----TCTTCCCTCTTTCTCTTTAT-ATCTTTCTTTCTCCTTCCTTCCTTTCTCTCT chr4 - 94230402 45185582 45185581 45185743 49044660 49044659 49044821 162 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x..x:..x.....::...:.:.xx.:..xx:.....x:...x................x.:...--....:....:.:.:.:--.:::.........:x...-----.::..x..x:..x.....x.-.:.x::.:.xx..::.:x...:.......:. 67M2I16M2I18M5I20M1I31M 103/152 67.8% 162/94230402 0.0% 10/152 6.6% -43165314 -51065088 +3402 chr4 + 190214555 2020328 2020327 2020441 114 CTTCTTTCCTTCCTTCCTC-----------CCTCCCTCTCCCTTTCTTCCTTTC---TTCCCTCTTTCTCTTTATATCTTTCTTTCTCCTTCCTTCCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTC---TCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.:.......x.x.:..-----------.....:.:...:...:..:..:..---:...x.x..:.x:..::xx...xxx:....x:...:...---.............x.xx..::........ 19M11I24M3I39M3D29M 78/111 70.3% 125/94230402 0.0% 17/111 15.3% -41061572 -53168830 +3313 chr4 + 190214555 2020739 2020738 2020814 76 TTCTTTCTTTCCCTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ..:...:...:..x:.....:.x:xx:xx..::...x.x........::.:............::.:......x.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -54130811 -40099591 +3034 chr4 + 190214555 2030956 2030955 2031006 51 ACAAAAAACAAACAAACAAAAAAAACACACAAAAAAACAAAAAACTGTGTT chr4 - 94230402 37986044 37986043 37986094 56244309 56244308 56244359 51 ACAAAAAACAAGCAAACAAACAAAACAACAGCAACAACAAAAAACAGTGTT ...........:........x......xxx:x..x..........x..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -35955088 -58275314 +3043 chr4 + 190214555 2033102 2033101 2033170 69 TTTTTGTTGATGTTGTTGTTGTTGCTTTCTGTTTGTTTTTCTTTTATTTTCTTTTTTTTCGTTTTTTTT chr4 - 94230402 3257767 3257766 3257835 90972568 90972567 90972636 69 TTTTTGTTGTTGTTGTTGTTTTCACTGTTTTCCTGTTTCTGCGTGCATTTTTTTTTTACCATTTTTTTT .........x..........x.::..x.:.x::.....:.x:x.xxx...:......x:.:........ 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -1224665 -93005737 +3001 chr4 + 190214555 2033105 2033104 2033163 59 TTGTTGATGTTGTTGTTGTTGCTTTCTGTTTGTTTTTCTTTTATTTTCTTTTTTTTCGT chr4 - 94230402 54317743 54317742 54317801 39912602 39912601 39912660 59 TTGTCTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGCCCTATATTCTTTTCATTCAT ....:xx.x............:.x.:...........x:::...x.......:x...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -52284638 -41945764 +5705 chr4 + 190214555 2042727 2042726 2042829 103 CCCCCGCAGGCCGCCCATGCGTGGACTGCCACGCCTTCGAGTTCATGCAGCGCGCCCTGCAGGACCTGCGGAAGACAGCCTGCAGCCTGGACGCGCGGGTGAG chr4 - 94230402 8073656 8073655 8073758 86156645 86156644 86156747 103 CTCTCTTAGGCCGTCCCTGTGTTGATTGCCACGCATTCGAGTTCATGCAGAGGGCTCTGCAGGATTTAAAGAAAACAGCATATAATCTAGACACACGGGTAAG .:.:.x:......:..x..:..x..:........x...............x.x..:........::.:x:...:.....x.::.::..:...:.:.....:.. 103M 75/103 72.8% 103/94230402 0.0% 0/103 0.0% -6030929 -88199473 +5787 chr4 + 190214555 2042733 2042732 2042859 127 CAGGCCGCCCATGCGTGGACTGCCACGCCTTCGAGTTCATGCAGCGCGCCCTGCAGGACCTGCGGAAGACAGCCTGCAGCCTGGACGCGCGGGTGAGCGCCCGCGGCGCGACGGTCCTCCCGGGCTT chr4 - 94230402 8094571 8094570 8094697 86135706 86135705 86135832 127 CAGGCCGTCCCTGCGTTGACTGCCATGCGTTTGAGTTCATGCAGAGGGCGTTGCAGGATTTAAAGAAGATGGCGTATAATCTGGACACGCGGGTATGTGCCTCCATAGAGAAACTTCTCCTTAGCCT .......:..x.....x........:..x..:............x.x..x:.......::.:x:.....::..x.::.::......:.......:x.:...:x.:xx.x..x:x.:....:x:..:. 127M 87/127 68.5% 127/94230402 0.0% 0/127 0.0% -6051838 -88178564 +3175 chr4 + 190214555 2053511 2053510 2053593 83 ACAAGAGCGAAGC--TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAATGAGTAAAGTGAATGTAAATGGGATAAA chr4 - 94230402 72505090 72505089 72505174 21725229 21725228 21725313 85 ATAAGGCAGAAGCAATCCATGATAACAGTAAAAAAAAAAAAAAAAAAAGAAGCAGTCAGAGTAACATGGATACTACTGATATAAA .:...:xx.....--.....xx:..x.:x.......................x..xxx......x:..:..::x.x..:x..... 13M2I70M 60/83 72.3% 85/94230402 0.0% 2/83 2.4% -70451579 -23778823 +5012 chr4 + 190214555 2059316 2059315 2059744 429 GCGGCGCAGCTCCCTGCGCGCGCCCCGGCCGCCCGCCGCC---TCCGCCCCGCGCCCCTGAGCTGCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCGCGGGTCCGAGGGCGCCGCGCCCTTGCCCTGGGCCCGGCCGTGCCCGC-CGCCGCCCGGCCGCGTCCCCGCTGCCGCGCCGCCCGGCCGGGTGCATGCATTGTGGGCCTCCCGACATGGTCTGCGAGACGAAGATCGTGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGCCGGCGCCATGTGGCCCCCGC----TGCCCGCCGCGCCCGGGCCGGCCGCCGCGCCCCCCGCGCCCCCACC---TGCCCCGG---TGGCTCAGCCTC----ACGGCGGGGCGGGGGGCGCGGGGCCGCCGGGGGGGCGCGGCGT chr4 - 94230402 67688246 67688245 67688646 26541757 26541756 26542157 401 GCCGCGCCGCCCTCCTTCCGGCCTCTCACCGTGCGTCGCCGGCCCCGTTTTGTTCCCGGGAGGAGCCGCCGCCGCCGACCCCGCCAGTGCCTCTCCCGCCGCGGCAGCG---CCAAGGCTgccg-gcccctcccgcccgccgcgctgggctgacgcggggggcggctccgccccgcccg--acaccgccccgccga-----------gggggccgc--------ggcggcgaggcggc-------tccggcccggcccA----GCACAGCCCGGAGCGGCGTGGGGC-CGCCTCCCCCCAGCGGCTGCGCC-----TCCCTCGCGGGTGGGCCGCCCCGTTACGGCCGCCCCTTCCTCCCACCGCCCCCTCGCCAGGTGCCGAGGGGCTGGAGCAGCCTTGGGGATGGGGCGACGTGGGGAGCGG----GCGGGAGAGGCTTCGCGT ..x....x..:.:.:x:x..xx.:.:x:...:x..:....---:...::::.:x...xx...xx.............x.x....::x:...x.:x.......x..x...---..:...x:....-....:.x..x:xx...xx..:.x..:x:.-..xx.xx....:x..:...xx.:.--:.:......x....:-----------.x.....x.--------.x.x.....:..:x-------x...x.xx..x...----..:.x...x..:..x:x.x:..:.-...:x.:.x..:x..x.x.....-----x...:...----x.x.....x..::xx.....x..x::x.x...x....x...:.:..---....xx..---...xx......:----.:..x.x.:..x....x....----..x..:.:...x:x.... 40M3I66M3D12M1D29M1I24M2D15M11D9M8D14M7D14M4D24M1D23M5D8M4I46M3I8M3I12M4I21M4D18M 248/383 64.8% 401/94230402 0.0% 64/383 16.7% -65628930 -28601472 +8063 chr4 + 190214555 2060984 2060983 2061187 204 CCCTCTGCCCCCAGCGCTGTGCTTCGCCGTGAGCCGCTCGCTGCTGCTGACGTGCCTGGTGCCGGCCGCGCTGCTGGGCCTGCGCTACTACTACAGCCGCAAGGTGATCCGCGCCTACCTGGAGTGCGCGCTGCACACGGACATGGCGGACATCGAGCAGTACTACATGAAGCCGCCCGGTGAGT-------CCCGCTCCCGCCGCTCCCC chr4 - 94230402 8191563 8191562 8191773 86038630 86038629 86038840 211 CCTTATCTCCATAGTAATGTGCTTTGTTGTGACCAAGTCCTTCCTGCTGACCTGCTGCTTGCCCATCTTTCTGATGGGCATGAGGTACTACTTCAGCAGAAAAGTTATCCTCCACTATCTCGATTGCGCGCTGCATACGGACATGTCTGATATCGAGCAATATTACATGAAACCTCCAGGTGAGTGTGAGTGCCCGGGGCCACCTTCCCCC ..:.x.x:..x:..::x.......:.::....x.x:x..x:.x........x...:xxx....x::.x:x...x.....x..x.x.......x....x.x..:..x....x.xx...:..x..x...........:.........x.x..:........:..:........:..x..x.......-------....xxx..:..x::.... 185M7I19M 143/204 70.1% 211/94230402 0.0% 7/204 3.4% -6130579 -88099823 +23143 chr4 + 190214555 2063744 2063743 2064127 384 GCCCTATCCCCTGCAGGCTCCTGCTTCTGGGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGTGGTGCACAACTACTCCGCGGTGGTGCTGGGCACGACGGCCGTCAAGGTGGCCGCCCACAAGCTCTACGAGTCGCTGGGCTTCAGACACATGGGCGCCAGTGACCACTACGTGCTGCCGGGCATGACCCTCTCGCTGGCTGAGCGCCTCTTCTTCCAGGTCCGCTACCACCGCTACCGCCTGCAGCTGCGCGAGGAGTGA chr4 - 94230402 8216621 8216620 8217004 86013399 86013398 86013782 384 GCTTTGTCTCTCGCAGGCTCCTGCTTCTGGGTGGCCGTCCTGGACGGCAACGTGGTGGGGATCGTGGCAGCGCGGGGCAATGAGGAGGACAACACGGTGGAGTTGCGCCGCATGTCTGTCGACTCCAACTACCGTGGCAAGGGGATTGCCAAGGCCCTGGGCCGCAAGGTGCTGGAGTTTGCCATGCTCAACAACTACTCCTCCGTCGTACTGGGGACCACAGCCGTGAAGATGGCAGCCCACAAGCTCTATGAGTCCTTGGGCTTCAAGCACGTGGGTGTGGTTGAACATTACGCGCTCCCGGGGATGACGCACTCCTTGCTGGAGAGAATGTTCTTCCAGCTTCGCTACCACCGCTACCGCCTGCAGCTCCGTGAAGAATAA ..::.:..:.::..........................x.....:..............x..:.....x..:....x.x.:.....................:...xx..x........x.....xx::.x...x........x..:........x........x..............:...:..x.xx...........x.x..x..:.....x..x..:.....x...:....x..............:.....x:.........::...:....:.:x:x...x..:....:...x.....x.....x.x...x:..x:x...x.xx.x.........x.:..........................x..:..:..:.:. 384M 305/384 79.4% 384/94230402 0.0% 0/384 0.0% -6152877 -88077525 +4760 chr4 + 190214555 2065732 2065731 2065930 199 TGTGCAGAGCACTGTAC------AGACCCCACTCCCCTGTACATTCCTCCCTGGAG--------GTGCCCGGTCCCCGCTTGGGGATGGGAGTTTTGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGC--TCAG-ATTTTGTTAATCTGGAATATACAGACAGACGTAAAGTGTTTTAGCAAAATGGAAA--------------CAAACAG-TTGTGCCTTTTT chr4 - 94230402 8218715 8218714 8218934 86011469 86011468 86011688 220 TGTATGGGGCACTCTATTTTTCAAAGTCTTACTATGCTGTACATTTCTCC-TGGAGCTGAAATAATGTACTGTT---GGTTGGGGG-----GTTTTGTATAGTGTACAGAAATGGGCAGAATATTTTCTTGCTGCTTTCAGTGATTTATTAACCTAAGGAAAATAGACAACTATAAAGTG--TTAGTGAAAGGGAAAGGAAAAAAGAACACAAAACAGTTTGTGCCTTTTT ...:::.:.....x..:------.:::.::...x:x.........:....-.....--------:..:x.x..:---.x......:-----........x.x...........x....xxx...........x..--....-:x...:....:..::::x.x.:.....:x::.......--....::...x.....--------------x......-............ 17M6I27M1D5M8I10M3D9M5D44M2I4M1I38M2D15M14I7M1I12M 140/188 74.5% 220/94230402 0.0% 43/188 22.9% -6152983 -88077419 +6956 chr4 + 190214555 2072042 2072041 2072302 261 GCTGGTGACCTTGG-GGAAGGCCACACAATGGACTGCTGGAAACCAGTTCTCTCCTCCCACTGTTGCCTGGGGCTACAGACAAAATGAAGGCGAAAAATGCAGGGGTGGGG-GCTGGGTGCTGGCAGGGGACCCAGGGGCAGCCAGGCTGTTGCTGGGAGACTCAGTG------CGACATGGGCC----TGGCG--------------------------GAGGGCCCCAGGCCTCCTGCAGTGGCACCAGGTGTCCCCATGAGCGGCCGGCACTCAGGCTCACCTTGAGGGGTACCTG chr4 - 94230402 8239387 8239386 8239679 85990724 85990723 85991016 293 GCTGGTTACCTTGGCTAAAGGAAACACAATGAACTGGTAAAATCCAGTTTTATCTCACTGCTGTTGCCTAGGGCTACAGACAAAATGAAGTAAAAAAATTCACATGCAGAGTATTAGGTGCTTATGAAAGATCCAGCAGC------GCTGTTGCCTAGTGATTCAGTGAGGAATCAGCATAGGCCAATGAGGTGTACGGGTACTGAATAACATCCCCGATGACTGCTTTACATCTCCTGCAATTCTGTCATACACCCCCATGATTTCCCAGTGGTAAGAAGCACTTTCAAGGGAACCTG ......x.......-x:....xx........:....x.::..x......:.x..::x.::.........:....................xx:......x..x:x.::.:.-::.:......x::::::..:....x:..------........:x:.x..:......------.::...:....----x..:.--------------------------..xx..:::.x::........:.xx:::..x::::........x:xx..:.::x.x..:xx...:..x.:...x..... 14M1I96M1I28M6D22M6I11M4I5M26I79M 169/255 66.3% 293/94230402 0.0% 44/255 17.3% -6167345 -88063057 +4590 chr4 + 190214555 2075449 2075448 2075522 74 TACCTGCACACTCCGGGATCTGCGGATCTTCCACTTCAAACAGCAGCTCATCATGGATCTGGGCCACCAGCCTG chr4 - 94230402 8249118 8249117 8249191 85981212 85981211 85981285 74 TACCTGAAAATTCCTGGATTTGGGAATCTTCTACTTCAAACAACAACTCATCATGAATCTGAGCAATTAACCTG ......x.x.:...x....:..x.:......:..........:..:.........:.....:..x.::.:.... 74M 58/74 78.4% 74/94230402 0.0% 0/74 0.0% -6173669 -88056733 +5152 chr4 + 190214555 2085609 2085608 2085747 139 TCACCTGTCTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTCTGCAAAAAACTCTCCAAAAACTGGGCAGCTTCCTGAATAGGAACTCCAAGGCAAGCAGCCAGCCGCTCCTTCCCTG chr4 - 94230402 8265170 8265169 8265308 85965095 85965094 85965233 139 TTACCTTTATTTTGGCATTGTCCAATGGTTTTCTTTGTAAATTCATGTACTTTCTTGTATTTTTGCATAAAACTCTCTATAAAGTGACCAGCTTCATGAGGAGTAATTCCCAAGCATTCAGCAAGACGTTCTTTACCTG .:....x.x.xx..:..:..xx....:.:.x:::xx.::..x..x.xx.:.........:..:....x.........:.x...x..:x.......x...:x..x..:...x.:...xx....x..x..:..:..x.... 139M 93/139 66.9% 139/94230402 0.0% 0/139 0.0% -6179561 -88050841 +4508 chr4 + 190214555 2095845 2095844 2095947 103 GCCTACCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGTGTCACCTGTTCCACGGGCACATCCTTCCTGCATGGAGAGAC chr4 - 94230402 8267612 8267611 8267714 85962689 85962688 85962791 103 GCCTACCTGCTCCATAAACCACTGAGTAAACGATACGCTTTGCTTGCTCTCTATCAGTTTGTTTCACTTGTTCACTTGGAATGCCCTTCCTAAACAAACAAAC ................:.....:.x...x..x.:x:x...x.:.........:..x.:x...x....:.....xx:x..x.:::.......:x.:::.x.:.. 103M 71/103 68.9% 103/94230402 0.0% 0/103 0.0% -6171767 -88058635 +3187 chr4 + 190214555 2098893 2098892 2098947 55 TGTGTGTGCACATGCACGTGCGTGCGCACACACACACACACACACACACACACTG chr4 - 94230402 14964832 14964831 14964886 79265517 79265516 79265571 55 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTG ..:.........:.::::..::.:::..xx........::............... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -12865939 -81364463 +3270 chr4 + 190214555 2130263 2130262 2130332 70 AGGAGAGGAGAGGGGAGGAGAGGGGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGAGAAGAGGACAAG chr4 - 94230402 47816948 47816947 47817017 46413386 46413385 46413455 70 AGCATGGGACAGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAAAG ..x.x:...x..:.:....:.:...x..x.:.....:x:.x....:....:....:.....:.::.x... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -45686685 -48543717 +3426 chr4 + 190214555 2147731 2147730 2147791 61 CTCCCAGGTTTAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.::....:...:.x...x.xx.x........::.:.........:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -16049408 -78180994 +3051 chr4 + 190214555 2150082 2150081 2150132 51 CAAAAACAAAAACAAAAACAAAAAACAAAAAACAAAACAAAACAAAAAGAA chr4 - 94230402 4338921 4338920 4338971 89891432 89891431 89891482 51 CAAAAGCAAAAACTGGAAAAACAAACAGAAAACAAAACAAACAAAAAAAAA .....:.......x::..x..x.....:.............xx.....:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -2188839 -92041563 +3023 chr4 + 190214555 2154191 2154190 2154244 54 ATCTCAACAAAAAAAAAAAAAAAAAAAAAAAAAAGACATTTTAAGTATGGCAAA chr4 - 94230402 65591671 65591670 65591724 28638679 28638678 28638732 54 ATTTTACCAAAAAAAAAAAAAAAAAAGGAAAACAAACATTGTGTGTGTAGTAAA ..:.:.x...................::....x.:.....x.:x..:.:.:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -63437480 -30792922 +5264 chr4 + 190214555 2156782 2156781 2156873 92 ACTTACAGGATGCTTGGCTGAAAGTCTTCCAGTCACAGTTCCAGTCTGATTCCATGTAGAGGAAATGGAGCCCTTTATTAGTTAAAAAGAAT chr4 - 94230402 8301809 8301808 8301897 85928506 85928505 85928594 89 ACTTACTGGATGTTTGGATGAAAGTCTGCCAGTCACAGTTCCTGTCTGATTCCATGTAGGGCAAATAAATCCCT---GGAGTCAAATAAAAT ......x.....:....x.........x..............x................:.x....::.x....---xx...:...x.:... 74M3D15M 74/89 83.1% 89/94230402 0.0% 3/89 3.4% -6145027 -88085375 +4359 chr4 + 190214555 2174688 2174687 2174797 110 TACCTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATAAACCATAATCCTGTTTAATAGGA-AGAAAT-AACATC----------AACGTCAATTTAAATATTATT chr4 - 94230402 8305004 8305003 8305125 85925278 85925277 85925399 122 TACCTGCCAGAACTTTGATCAGTGGAAGCTCTAATGTGCAAAATAATTTCCACAAACCTTGAACCTGTATAGTAAGATACAAATCAGCACCAGTATTACCAAACTTCATTCTAAAAATTATT .........:..:.xxx.....x........:..x..:.:.....:..x...:.....x.:.x.....x..:..:..-.x....-.:..:.----------...x...x.:....x...... 77M1I6M1I6M10I21M 84/110 76.4% 122/94230402 0.0% 12/110 10.9% -6130316 -88100086 +3084 chr4 + 190214555 2183218 2183217 2183292 75 AGCCTTGTTGGAAACAAGTTTGGCAGTTCCTCAGAATGTTAAATACAGAGTACCACATGACCCAGCAATTCTACT chr4 - 94230402 70777934 70777933 70778008 23452395 23452394 23452469 75 AGATTTCTTGAAAAGATCTTTGACTCCTTCTCAGAATCTTAAATACAGAGTATGTCATGATGTTGAAATTCCACT ..x:..x...:...x.xx....:.xx:.:........x..............:xx.....:x:x.x.....:... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -68594716 -25635686 +3212 chr4 + 190214555 2183942 2183941 2184002 61 CTGCCAGGTTCAGGTGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..x.::......:...x...x:xx.x........::::................x.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -16013197 -78217205 +3008 chr4 + 190214555 2190022 2190021 2190074 53 TCAAAAAAAAAAAAAAAAAAAGAAATAGGACAAAAATGCCTAAAATCTGTATG chr4 - 94230402 71652347 71652346 71652399 22578004 22578003 22578056 53 TCTAAAAAAAAAAAAGGAAAAGAAATAAGAAAACAATCCTTAAAATTGGAATG ..x............::..........:..x..x...x.:......:x.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -69462325 -24768077 +3247 chr4 + 190214555 2194117 2194116 2194172 56 CCATTTTACAGATGAGAAAACTTAGTCTTGAAGAGGTTAAGCAATTTGGCCAGGGT chr4 - 94230402 10729206 10729205 10729261 83501142 83501141 83501197 56 CCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ...........:..:.......x..x.x::x.x........:......x....:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -8535089 -85695313 +3069 chr4 + 190214555 2209629 2209628 2209674 46 CTTTATTTTTAAGGTTTCTTTCCTTTTCCTTTTTTTTTTTTTTTTT chr4 - 94230402 38592 38591 38637 94191766 94191765 94191811 46 CTTTGTTTCCAAAGTCTTTTTAGTTTTCCTTTTTTTTTTTTTTTTT ....:...::..:..:.:...xx....................... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 2171037 NA +3069 chr4 + 190214555 2209643 2209642 2209700 58 TTTCTTTCCTTTTCCTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTGTTCTGTT chr4 - 94230402 76182414 76182413 76182471 18047932 18047931 18047989 58 TTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ...:.x..x.:...xx........x............:...x.::.xx.......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -73972771 -20257631 +3489 chr4 + 190214555 2214852 2214851 2215013 162 TGCTGTTTT---ATATATATACACACACACATATACACATACATATACATATATATGTATATACATATACATATATATGTATATACCTCAGCCATATATATATGAGAGACAGAGTGCTCTTGCCTTAACAAAAACAGATAGGAAATAATATCCAT-----CATCTAACCA chr4 - 94230402 66904837 66904836 66904988 27325415 27325414 27325566 152 TGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT-----TTCCTCTCAGC----TCTAAATGAGAAAGAGAACATTCTGG--------AGGACAGA-AGGAGAAACCATTCACATGAGCATATGACCA .........---....:..:::...........:.....:......x:.x:.x:.x..:......xx:.:.:::..-----.x:x:......----.x..x......:.x...::::...x.--------.::.....-....:.x.x:..:..:-----...x.:.... 9M3I64M5D11M4D26M8D8M1D16M5I10M 100/144 69.4% 152/94230402 0.0% 26/144 18.1% -64689985 -29540417 +3007 chr4 + 190214555 2214859 2214858 2214911 53 TTATATATATACACACACACATATACACATACATATACATATATATGTATATA chr4 - 94230402 87372740 87372739 87372792 6857611 6857610 6857663 53 TTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ....x.x:.x...........x.:.....:.:x.....:...:..:....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -85157881 -9072521 +11586 chr4 + 190214555 2231922 2231921 2232249 328 AATTTTCAATCTTCAAGACTAACAGCCTTAATCTTTGATTGAGTTTCTAAATTCTCCACAATATCTTTCAGATAATCTTCATCTTTTAAAAAATATACATAGAATTCTCTTTCCATTTGATGTAATTTATTATTTGCCAAAGTTTTTCTTTTTGTCTTCACATCAGCAAGAATATCAGTGAGGAGATGATTTAGCTTATTCAGTTGAGATTCAACTTTATGAAACTGCTCTGTTAACTCCTAAAAAAGGAAAATAAAAATAAAAATTAAAACACTTTATTCCT----------AATACCAATTA---TAAAATTAAAATATAATTTACATGG---AAAGACTTT chr4 - 94230402 8322981 8322980 8323314 85907089 85907088 85907422 334 AATTCTCA-TCTTCCAGACCACTGGCTTTAGCCTCTGACTGCTGTTCGAGCTTCTCCACCATCTCTTTCAAGTGGTTCTCATCTCTGAAAAAATACACATACAAGTTTCTTTCCATCTGGTGCACCTTATTGGATGCCAAGAAGTTTCTCTTTGACTTCACATCAGCGATAAGATCCATAATTAGTTGATTTAGTTTATTTAAATCACCTTCCAGTTGATGAAACTGCTCAGTAAGTTCCTAATAAAAG---------ATACACAACAAAAAATGTTATTTTTGTATCATTAAAACACCAGCTGAACTAGAAATAAAAAAAGGCTTGCAAAGGCAAAAGACTTT ....:...-.....x....:.x::..:...::..:...:..xxx...x.:x........x..x.......::.::.::......:.x........:.....x..x.:.........:..:..:.x:.....:xx......::xx.....:....x............:.x..x...x:.:.xx..x........:.....:.:x.x.xx...x.x..x............x..x.::......x...:.---------...x.x.x:....x.:x.....::.----------..:....::.:---..:..x.....x.x:::..:..x:.---......... 8M1D240M9D25M10I11M3I25M3I9M 225/318 70.8% 334/94230402 0.0% 26/318 8.2% -6091059 -88139343 +10599 chr4 + 190214555 2236176 2236175 2236500 325 ACAACAAGCATTTTTTTAAAAAGCATTTTTAACTACTATGGCAAATACCCACCTGATCACTAAGCAAAAGCTGATTTCCTCCTTGATACAAAGTATCACAAAGCATGTCCACATCCTTATTCCGTTTGGACAGAAAGAAAGAATGTTCTTGAGCAGATACTGCCAACTGATCTTGTACTAAAGAAATATTCTGTTTCAATTTCTCAGCCACTTCCTCAAGGTTTCCATGAGTTAGAAACAATTCTTTTTTCTTATTCTCTCCCTCCAAAACTTGGTAAAGCCTGAAATGTAAAAATTAAAATTATAGGGAAAAATTATCAAGTCA chr4 - 94230402 8324385 8324384 8324695 85905708 85905707 85906018 311 ACAACAGGCAT------GGATAGAATCATTTAATAACAACGTAACAACATACCCGACTAGTGAGTAGTATCTGATTTCCTCCGCAATAGAGAGCATCATGAAGAGCATTTACATCACTGTCTAGTTTGGACAACAAGAGAGACTGCTCCTGAGAAGACACTGCTAGCTGGTCTTGTGCTGTCACGCAATCCTGATGCAACTTCTGAGCCATCTGTTCCAGGTTTTTGTATGTTTTAAACA---CTTGTTTTTTGTTTTCTCCTTCCAAAAGTTGATAGAGCCTGGAAC-----AAATGAAGTTAGACGCAATCATTTTTAAGTTA ......:....------::.x..x..:x..x.x..x:.xx.:..xx..x:...:..::.x.:..:.:x.x............x::...x.:..:....::...x:::.::.....x:.:.::x.........:x....:...x..:..:....x...:.....:.:...:......:..:xx:x:xx..:...x.x...:....x.....::.x:..x......:::.:x...xx.....---...x...:..:..:.....:.......x...:..:......:..:-----..x.:..:...x.x.x..xx...x.:....:. 11M6D223M3D45M5D32M 206/311 66.2% 311/94230402 0.0% 14/311 4.5% -6088209 -88142193 +3481 chr4 + 190214555 2237447 2237446 2237539 93 AAGGGAAGGAAAGGAAGGGAAAGAAGAGAGAAAGAGAGAGAAAGGGAGAGGAAGGAAGGGAAAGGAAGGAAAGGAAGGAGGGAAGGAAGGAAA chr4 - 94230402 40465779 40465778 40465867 53764536 53764535 53764624 89 AAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAG--AGGAAAGGA--GAGGGGAAAAAGCAAA ......x.:x...:.x.:....:::x......:x.::.:....x..:x:x.:...:........--.........--.....:.::...x... 64M2D9M2D16M 63/89 70.8% 89/94230402 0.0% 4/89 4.5% -38228332 -56002070 +3528 chr4 + 190214555 2237462 2237461 2237550 89 AGGGAAAGAAGAGAG---AAAGAGAGAGAAAGGGAGAGGAAGGAAGGGAAAGGAAGGAAAGGAAGGAGGGAAGGAAGGAAAAAACAAGCAAG chr4 - 94230402 76099077 76099076 76099168 18131235 18131234 18131326 92 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAG ..:......::....---.::.xx:.:..::.:.x..:....:.....::..xxx.:::...x....:.::.:...x........:...... 15M3I74M 59/89 66.3% 92/94230402 0.0% 3/89 3.4% -73861615 -20368787 +39354 chr4 + 190214555 2238596 2238595 2240952 2357 ATACGTACCTATGAGTAGAATAATCCTTAGTATCAATGGTATTCCTTGGATTTATCTGTTGAGAAACTGATGGATCTGTTAACATTTCTAATTGCTTGTAGAGCATCATGTTACTTTGACTAAGTTCTTGAACCAAATTTTCAAGTTGACGATATATGTCCCGATGCTTTCTTAATTCAATTTCATATGATAACTGTAGAAGTTCAAATGATGCCTTTTGTTTTATTAATTGATTTAAAACTAACTCTTGTCTTGCTGTATAATAATCTTGTTTAGCAATCTGCAGATCAAAATCTCCCTTTACCACTGGCATATTCAATAACTGGGCATTCTCTCTTACCACAGCAGGTAAACTTCTGTCTTTTATTTGAGTGACCTCTTTTTCAAGTTTCATAATCTCACTGGTCAAGCTAGAAATTTTAGCATCCAAATTTTCTT--TGTCCAC-AGCCTATACAAAGAAAAGCAATTACATTTCAA-------ACTGTATGCCTAAATTTGAAATCATCTTAAGATTATTTTCACTTTCCA--------------CTTTAGGTGACCAGATAAT---------------------AAGC----TCAA---TGAATGAAAACT--------AATTTAATA----TTCATA-TAAACAAAA--ATTACAG-TTTAAAAGGGAAAA----ATGTGGACTAAGTCAAGGGTATGAATTACTAAATTT----TACTGC-----------------TATTACTACCATATATATAGTAACGGCTACCAAAATAGAGATCTTATTATACTTCT----TTTAATCAGAATCA-------TTATTAATAGGACACTATTCACTGAATCCAAGTATATG-TTACTAGTTTTTCTTAAGTTAAAATTA-----CTTCAATAGGTCCTAGTTGGCCAGTTGATTTTAGCACTTC--------TACGTAATTATTGGATTTCCTATATCAT---TCAAATGTTT---TGTCAGCTATAGAAACTAACTTGGTGCTGATAT-------TCTGATTCAGAAAAGTTACATTT-----TTACTCAAGTATCTAGCAGTTATATTACCAAGAAAACAA------GCTCTCCAAGAGTGCAGACAGACATCTGCAATACATCTATCCATATATTCTCAAAAAGAAATCAGTTTCAGTCTACTGAACCTGGACCTCTGACTTCATTAGCACTATGCTCTGGTTGGAGCAAACGAGGCAGAATACCCATAATAAAGCA-ATTAGTTTCTAGCCACATCTTAAAAAGAAAATCTCAGTCCAGTCTGTATCTGCATTACACAAATTTAAAATTCGGAATGCAAATTAAAGCACTTTTGTTTAAAATAAATTAGATAATGTGGTAGAGATTATAATTACTATTGCTGCCCTCCATTAACGTATGGAACTAT---TTGTA---------------TGAAACATTGACACAGATCACAAATAAGCACTG------------AACAAAGAAAATAAAATGTAATCTCTTCTCAG-ATGCACCATTCTAAAGTACTTTAACAGC---AATATTATCTC-------------CTCTATTCCTAACAATAATTACAATGTGAATCCAATCTCATTTCTTATGCTTACCTTGCTGGTTAGGCTGTGAAGACTCTCCTCTGCCCATTTTATACTTGACTTCATGCTCGAATTACTTGCTTTTAAGTGAATTAACTGATGTTGAGCACAAATGTATGCGAGCTGCAGTCTAGCCATCTCTAGTCGTCTCTCCTCAAGGATTTCTTGATT-ATCACAAATAGATGGTGTCTGTATATCTAAAAGTTGAAAATTGTCTTCATTTGAACTTTCAACTACTTCATGTATACCCTGAAAGAACTGTTTTTTGGTATACAAAGTTAATGCTGCTGTGCTTTGCTCTTCCTGACTTAGGTATTTTTCCAAGGAAAATTGCGATAAAAATACCAG---TGGATTTGTCCCTTGACCTAAATTAGAATGTCTGAAGAACATCATCAATTGTGTAACTTCATCAGTAAGAGCCTGAAGTTCATTACTGATCTTAGTGATCATTGCATTTAGAATTCCTTGACTCTGCTTCAGCTTTTTAGTGGCTTCTTCTTCTTTAGCATTTAACCTCAGAGATTTGTGGCTAGTTACTGAAGCCATCAATTGACATTTATTACGTCGCTGAATTTTTAGGTTCTTTAATTTCAGTAGAGTTTGAACCTCATCCTCTAATTTCTCCAGCTCTTTATCATCCA---GTCTAGGTGTCTTCAAATCAGAAGTTTTACACGTTTTAAGAGCTTCATCCAATGCCGCCCCTTCTAGAATAGGCTTGCCTGATTTCTGAAGAATGCTAAAAGCTTCCAATTCTCTTTCAGACAACACGTTCTGTTCATTCACATTCCCACAAAACCACTTCAGAAACGATTCATCTTCAACGCCCTCAAACAACCAGTCAAAGTCTTCTCCATTAAGATTATCAGCTTTGGGATAACCAATTTTTTTTAATGTTTCCACAAACTCATTTCCACAACTCATGGTTTT chr4 - 94230402 8326318 8326317 8328735 85901668 85901667 85904085 2418 ACACTTACCTACAAGAGAAATCATCCTTTGAACTAATAGAGTTCCTTGGCTTTGCAAGTT------CAGTTTGCTTAGATAACACCTCTAGTCTCTGTTGCATCTCATTACTGCTCTGTTTCAGAGATTCTATCAAATTCTCAAGTTGACAGTGGATGTCTTTGTGTTTCTTCAATTCAATGTCATAGGCAAGCTGAATAAGTTCAAATGACGCTTTCTGCCTTATCAGATGGCTGCAGATTTCATCCTGTTTAGAAGCGAAATGGTCCTGCTGAGCAATCTCACGATCCAGGTCTGCCATTACCACGGGTGCAGTGAACAGCTGTGCACGCTCTTTCAAAAGGGAAGGCAGATCTTCGTTGTTTATTTGAGCTATCTGTTGCTTAATTGTAGAGATTTCATCATTTAAACTAGATATTTTGGCCTCGACGTTTTCTTGTTTTCCATTACCCTGCATAAAGCAA------TACATATCAATCCCTTCACCGTTCCCTGAGACTTTTGGTCACCTT-------TCTTCATTCTGCATCCCTAACACATTTCTTCAGTTCACACAAGAATCGTGCACTTTCATGACAATCAAAGCATCGTCAAAATTAAATGAGAACTCTGCAAGCAGCTTTACAGAACTTCACAATATACAAGGCCAATACAGATTTAAGATGGTAGGTATCATATATATT---TCAAGA-----AATAATTAAATCTGCTCTGCTGCAGAGCCATGAAACAGTTCATTAC----AGAAATACTGTAGGAGCTGT----------ATTTTAGTTTACACCTAGATTTCAAACAGATCTAACTGAAATCTCCCATGCAAAAAGGTTTAC---ATTCAGCCAGATGACTATCAATCCAGCCCA--TCAAAACTGACCTTTTTCAAATGACACTAATCAATCA---------AGCACTACATGCCTGTCACACAAATGAAAACATACCAACATAACACCTCAAATGAGTCCATGACTGCACTATAAGCTATTTTTCTTCCGTTACAAATCCCTCACATTCTTAAATGTCACATCTGCCCATCACTCAATGAGAGATCTGTGGGATT-TCAACTACACGATTCATTGTTTT---------------GATATCTAGAACATATC-ATCATTATGTCTCCATGTTAAAAGC--TCCCAAGTCATTGAACTAAAACCTGGAGGTTTTTTTTCCCTATA--------GGA-------------AATATTAACAATATATTACATTAGCCCCCA-----ATATGCAAAATTTAATTAAAGTTAAGGTTTTGATTATTGTACAAACAATGGAGACACAGT-TACAACTTGAAATTTCAGAGTTTAACAAAAATTAGAAA----GGTACTGCTAAGAACCAGTTTT-----------TTAATGCAATAAACTCTAGATTGCAGAATTCAAGGTACTCTGCCATACTGAAAAAACTCCTAACCAGTCACTGGAGCTACTTCACAAGAACGAGATTAAAAT----------CTCAGTAAGTGCAATTCCACTATGTTAAAACAGAGGAACTAATAACTCAGAACATGCCTGTCTCTATTTAAAACTCCA-CTACCTTATAAAACCATTTGCCT--------CTTACCTTGCTCTTTAGGGATCGCAGCATGCTTACTGCACACTCTATAGCTGAATTCAAGCTCTCTTCTTCAGCTTGCAACTCAATTAGCTGACGTTGAGCACAAATGTATGCTGCCTGGAGGCTGGCAATCTCCTGGC-TCTTTCCACAAGCTTCAGTAGACTCAGCACCAGCGACATGTTTGCTAATATCCACAAGCTCAAAGTTGTCTTTGTGCAAATTTTCAGCCAATTCCGACGTACCCTGATAAAAATGTTTTTTTGCATACGAGGCAAGTGCTGCAGTGCAGTGCCCTTCCTGAGACAAATACTTGTCCAAGGAAAGCTGGGAAAAAAACACTGGGTGCAAATCTGATCCTTGTTCTGAAGCTGAAGCAGTGAAGAAAGAGGCCAGTTTCTTAACTCTACCCACAAGAGACAGCAGTTCATTATTAAGCTTATTATTTGCTGCAGTGAACAGTTCCAGACCTTCTTTCAAATCCTTCTGTGCTTCTTCCTCTTTGATTTTTAGTGTCTGTAACATACTGCTGTTCTCAGAAATCATCACCTGAAGCTTATTATGCCGATGGATTGTAAGATTTTTCATTTTCTGAAGAGTTTGAAACTCATCCTCTAATTTCTTAAGTTCCTCCTCCTCCTCGTGACTGCTGTTCCCTGAATCTGCTGGCTTACAGGTCTTAAGGACTTCATCCAGTGCATTTCCTTCTAAAATGGGCTTTCCAGACTCAAGAAGACGATTAAAATCCTGCAGTTCTTCTTCAGATAACACATGCTGCTCATTTACAGTTCCACAAAACCACTCCAGAAATGATTTGTCTTCAGAAGACTCAAACAGCCAGTCAAAATCTTCTCCATTGAGCTCACTGGCTTTTGGATATCCAATTTTCGTAAGAATTTCCACAAACTCCTTCCCACAGCTCATGATTTT .:..x......::..x::...x......x.x.::...:.x:........x...::xx...------.x.x.x.x.:x.x.....::....:.:x..xx.:x.x.x:xx.::.:..:..x:.x..xxx..xx.:......:..........::.:x.....::x:..:..::.:........x.....x.xx.:...x.x............:..:..:..::....:.:x..::.xx.:.:.xxx..:...:.x.xx.::x...::..:..:.x........xxx....x.::...x..x.......x..:::.x.x..:.:...x...:x....:.:.xx.x:.x...:.:.::.::..:x..........:x.:..x..x:.:..x.x.x:x:..:...:::x.:..:.....x.....:..x..x.x:.......--.x....:-.x...::.:....x..------.....x....-------..:..x:x.:x.:.:..xx::...:...-------.:....:.:.x..--------------...:..x.x..xx:.x...---------------------....----....---.:.....:....--------.::..x.:.----....:.-..x....::--.x.....-.....:.x..x.::----..:.:x.:.---.....:-----...x.:.....:.----.:....-----------------:.....----.x.x...:x...:x:...::----------..:...x.x...x:..----..:..x....x::.-------.:x::x..:x:.x.xx:..:..---..:..:x:.x...-:..::.:.::xx.::.--.:....:.:-----:.....xx.::x...:.::::..---------......x.--------:..::..x.:xx::xx.x..x.:..x.:---.......xx.---..x.x..xx..x..:...x:..xx.x.:.x..:-------..xx....xx...x..:....:.-----.:......xx.xxx.x.x..x:x...-:...xx.x..:.------.:.:.---------------..:....:x..:.:...-...xx...:.:::..x:xx:...x.--.::..:x::.:.....:x::....xx::x..:x..xx.x....:--------...-------------....::x.:....x.x:.-.....:::.:.-----..x.xx....xxx...:xx...:x..x:.x.:x:.::xx....x.x.x.x:.:.:x.:.x-.:...x..:..::x::xxx......x.x........x.----....xx.x.x.x..::.x.x..-----------....:.:.xx:....x.---...:.---------------..xx.:.:...x.x.:x..x:..x:.:x.....------------..x..x..:.x......----------.....-.x.::.x....:.xx:.::.xx.....x---.x..x..x...-------------.......:xx...xx:.-:...xx.:.:..x...x.:x.x.--------...........xx.....xxx:.x..xx.x:::x....x..:.:....x:...x....x....xxx.:x::x....x:..x.x.....:....:...................x:x...x..x..:..x.....:x.x.-...:...x....xx.:xx.x..:.-.x...x.::::xxx..x.x:xx.....:.x...:.x...:.......::.x::..:.....:.:.x...xx:::........x.:..x........x.:....:.:.:x.:......x....xx...:........xx:.::..:..x..........::..x..x.....:..::.---:::..:..x:.....x:..:..x:x...xxxx.......x:xx::..:..x:x.....::.:.x::.....x.x.x.........:.:.x....x.:x.:::....x.x.:x.x.:.:x...::.x:....:x.::..xxxx........:.....:::x....::x..x.x:.:x.::x...:x.:x.x...::.....x:...x::......:.:..x..:...x.x..:..:..:.x....x.x..........x.................:x..:..:.:x..x...x---.x..:xxxx..::::....x.xx.x:.....x..:.....::.........:...xx::.......:...:.....x..x..:.:xx.....xx::.....x.:.x..:....::......:.....:.x...:.....:...x.:.............:......:....::......:x:xx........:.........:...........:..x.:.:::.....x.....x........:x.x.:x:.............x..:.....:......:.... 60M6D372M2I7M1I16M6D10M7I28M7D13M14I19M21I4M4I4M3I12M8I9M4I6M1I9M2I7M1I14M4I9M3D6M5D13M4I6M17I6M4D20M10D16M4I14M7I22M3D13M1I16M2D9M5I23M9D8M8I28M3I10M3I33M7I23M5I26M1D12M6I5M15D17M1D25M2D44M8D3M13D18M1I11M5D60M1D38M4D22M11D17M3I5M15I33M12I17M10D5M1I28M3I11M13I17M1D23M8D139M1D24M1I177M3I293M3I286M 1413/2221 63.6% 2418/94230402 0.0% 333/2221 15.0% -6087722 -88142680 +3087 chr4 + 190214555 2242816 2242815 2242862 47 CTTTGGGAGGCCGGGGGGGGGGGGGGGGGGGATCATGAGGTCAGGAG chr4 - 94230402 93816106 93816105 93816152 414251 414250 414297 47 CTCTGTGGGGCCGGGGGGGGGGGGGGAGGGGGCTGTGAGGGAAGGAG ..:..x.:..................:....::::.....xx..... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -91573290 -2657112 +6387 chr4 + 190214555 2250588 2250587 2250713 126 AGCCACTGTCGCCGCCGGTGCCACTCTGCAGGCTGTAGTGGTCGTCCGCGTCACTGCTGCTGCCAACACTGTCCAGCTCACCAGGGCCAAACTCCATGCCCTCTATGTCCACTTCTAGGGAGAATA chr4 - 94230402 8340643 8340642 8340768 85889635 85889634 85889760 126 AGTAACCTCCATCGCTTGAGCCGCTTTGCAAACTGTAGTGGTCTTCAGCATCACTGGCACTTCCAATACTGTCCATTTCACCGGGTGTAAACTCCATTCCTTCAATGTCTACTTCTAAAGAAAACA ..:x..:x:.::...:x.x...:..:....::...........x..x..:......x::..x....:........x:.....:..xx:.........x..:..x.....:.......::..:..:. 126M 90/126 71.4% 126/94230402 0.0% 0/126 0.0% -6090055 -88140347 +8473 chr4 + 190214555 2251038 2251037 2251248 211 CGCACCCGGAGGCCCAGGTGAGGCTGCCCCGCGCCCCACGC-CCCACCTTGCTCTGAGTCGTCCGTGGAGACAGCAGAGCCCGTGCTATCTGTGCGCACGCGCTCCACGCTCTGCACCGACAGCTGCTCCAGGCGCCGCTTCAGGAAACGATGCTCCTGCTGCAGCTGCTCCTTGATGCTCAGTGCCCGGCGGTCCTGCTCCTCCAGTTTCT chr4 - 94230402 8341552 8341551 8341752 85888651 85888650 85888851 201 CACAGCTGCAGGCCC-------TCTGCGCAGC-CCCCACATATTTACCTTGTTCAGAGTCA---GTGGATATTGTTGATCCCATGCTGTCAGTGCGGATGCGCTCCATGCCCTGCACGGATAGCTGCTCCAACCTGCGTTTGAGGTAGCGGTGCTCCCGCTGTAATTGTTCTTTGATATTCAGAGCTTTTCGGTCCTGTTCTTCCAATTTCT .:..x.:.x......-------x....x.x..-......::-:::......:..x.....:---.....x.:x.:x..x...:....:..x.....x.:........:..:......x..:..........:x.xx..:..x...x.:..:......:....:.::..:..:.....::....x..::xx........:..:....:..... 15M7D10M1D8M1I19M3D148M 145/200 72.5% 201/94230402 0.0% 12/200 6.0% -6090514 -88139888 +15574 chr4 + 190214555 2261789 2261788 2262632 844 CGAAGGGCAGCACCGAGGCGTA-GCCGTGCTCGGCCTCTGCGGACACAC-GGCGCGGTCAGCGGCCCCCGCCCGGCACGGCCCCGCCGC--CCGCC-CACCGCCGCGGGCGCACAATGGGGTGCGAGCGCTACCTCGATCCCTGCGCTCCAGGTACTCGGCCGCCTCCAGCAGGATCAGCAGGGAGTTCAGCTCCATCCTCCCGC-------------------------------------CCGCGCCCGTCCGCCCCGGGACG----GCGGCGG----------CCGCTGCCCGGCCCGCTCCGGCCGGCTCCGCTCGCCGCCCACCCCGCGCGCCCGGCCGCCGCACTTCCAGACTCCGCGGACTCCGGCGCTCGGCCGCCACCCTCCGCCTCAGGCCCTCAAATTGACACATAAGGGAGAGCGGCGGCCCGCAGAGCCAATGGGAGG-CGGCGTTCGCGCCCCGGGGGCGGGCGCCGGGCCGGGCTGGGGCCAATGGGGACGGGTCGAGCGCCTC-------------GGGCCGGGCCGAGAATGTTGACAGATGCAGAGCTGGGCTGGGATAGGCCGGCCGCGCTAGTAACAATTTAGAAGCCCGAGCTTAGCAACAGCACGTGGTGGCCCGGCCCCCGCGCTAGCTGACTGGCGGCCGCCGTGCATGTTAAGTAGGCGCCGCGCGCCGATTGGC-CAGAGCGGCCTATGTAA-----AACAGGCACTGCGAGCCAATGGCCGGTGGCGGGGCGCGCGGCCAATGAGGGCGCCGCAGCCGGACGCGTTGCCGAGAGGAAGCGCAGCGCGCGGGGACCGCCCGCCGTCCTGGGGGCCCGTTAGGACGCAGGAGCGTCTCCGCTACGAGAGCGAAGCAGGGCGCTCCGGGGCGTGCGCCGGGCCGGGCCGGGCCGCC chr4 - 94230402 8376115 8376114 8376953 85853450 85853449 85854288 839 CGGAGCACGGCGGAAAGGCGAGCGCCGTgcccgccccgcgcggcggccctggggcaggtgggg-----cgcggggcccggcccggccgcgATCGCCTCACAACAAAGGGAGAGCGGCTCGCGGCGCTCAGTACCTCGGTCTCTTCTCTCCAAGTACTCGGCCGCCTCCAGGAGAATTAACAGAGAGTTCAACTCCATGGCTGCGTGTGAGAGGAGAGGAgagcagagccgagctatgccgagccgcgctatgccgagctgagccgagccgtgccgagctgagccCCCCGCAGCCCGGCC-ACTCCGCTCCGCGCCGCGC----CCCGCGCCGAGTTCACGCGCGGGGGACTTCCAA--------GTCCCCAGTTATAAGGCACCTCTCTCAACCTAC--------ATTTGACACACAGTCGACAG--GCAGCCCTCGCGGCCAATAGGAAAACGGGGTTCA-GTGAAGGGGCGGGACGAGGCGCCTCCATGGGGCCAACCGG--CGGCCAGAGCCCCCCTCCCTTTTCCTCTGGCTGGGGCAGGGAATGTTGACAGATCCCCATCTCGCCTCCCATTGGCTGGCCACTATAGTAACAATTTAGAAGCCGAAGCTTAGCAACAGCACGTGGTGGCCCGGCCCCTTCGCGCGCCGATTGGCTCGCTTCTTGCATGTTAAGCAGCTACTTGGCGCTGATTGGCTCCGTGGGCACTATGCAAATGACAGCGGGGA--AGGAGCCAATAG-----GGCGGG-------------AGGGGCGTAGCATACAGCC----------GGGGAGGTGCAGAGGGCGGGGACAGCCAATGGGCGTGGAGG-------------AGGCGCGGCGTTGCCGTGAGGAAGAGGCAGG------CGGGGCGGG-GCGGGGCCTCGCAGCGCCTCC ..:..x:.:..:xx:.....x:-.......:..x..:x:....xx:.x.-..x..:.x::.x.-----...xx...x......x.....--:....-...x:.x:x...x.x:.:::xx.xx...xx.:x.......:..:..x.x.....:..................x..:..:.:...:.......:......xx::x..:-------------------------------------......:xxx...xx.:.:.x..----.:.x..:----------....x........-:.....x:.x..x....x.----...:.x...x.:x.x..xx..xx.x.......:--------.x.:..:.:xx.x:.x.:..x.:...x:...xx--------.x........:.:xx..x..--..:....x.:x:......:...::-...x....:-.:xxx....xx..:..xx.x...xxxx.........:x..--...x:x....x..:.-------------..x:x....x.:..............x.xx.x..x.x..xxx..x...:....:.xx...................x:................................:x...xx..:..:....xxx.x:.x...........:..x::.:xx....:.......-.x.x.x.xx.....:..-----.:.:..x.--:x........:.-----......-------------::.....:x...xx.:.x.----------.:...:.:....x.x........x...x::x.x.x...:..-------------...x...x.x::..:::...::x..:.....------.......x.-..x.....xx..x.x...x.. 22M1I26M1I13M5D21M2I5M1I108M37I23M4I7M10I13M1D19M4D33M8D33M8D20M2D24M1I9M1D40M2D15M13I168M1I17M5I8M2D12M5D6M13D19M10D41M13D31M6D9M1D21M 520/763 68.2% 839/94230402 0.0% 157/763 20.6% -6114326 -88116076 +13388 chr4 + 190214555 2269464 2269463 2269850 387 AAGTCCCGCC-CTTCAGTCGTCCCAAGAGTCCAGGAGCCTCCAG-CTTCTTAGAGGACAATGCATGTTAGCACCAACACCATC-----GCTTTCCAGACAGAGAAAAAAGA-TCCGCGTTCATGGAAGAAAGGAGAGCGTCTGCAATCCTTAAATAG---ATTTATGGAAATGGCTTCAAATTACAGCATTTAGAAAATAAATATAATCTC-AATACATAATATTTCCTCCATTATATA------CTCTCCCCCCGACAGAAGCCG-TTTCTATGCATATGTACTCCACCAGTAAACAGTAATTAGATTTATCCTAGAAAAGAAGCAGTAGGTGTGTCA----------------TCTCCAAAAATAAAACTGCAATCGTCATTGCAATGTGAAGCCTGAGATTTAAGCCTGAGGAGGTGTC chr4 - 94230402 8431911 8431910 8432326 85798077 85798076 85798492 416 AAGTCCTGACATTTTAATTATCTGAAGAGATTACAAGATGAAAGTCTTCCTTGAGGCAAATGTATATTAGTATTGATACAGTCATTGTGCTTTTCAGTAAGAGAAATAGGAGTCTGTATTTACATAAGAAACTATAGTGTCTGAGATCTTTAAATATCATATTTATGGAAATGATTCTGAATTACAGCATTTACAAAATAAAAACAAGCTTGAATA---AATATCCAGTCCGTTAAATAAGATCTTTTTTTTTCTCACAGAAGCAACTTTTTGTGCATATTTATTACACAACTGAATTTGAATT---TTTATCCTATAAAAGAAGCATTAAATCTGTCGGTTTTTTTTTTCTTTCTTTCTAAAAATAAAACTGCAATAATCATTGCAATGTGAAGCCTGAGATTTAAGCCTGAATAAGTACC ......:.x.-:..:.:.::..:x.....x::.x:..x:xxx..-....:.x....xx....:..:....:.:::.:..x:..-----.....:...xx.......x.:..-..:.::..:.::x......xx.x..:.....x:...:.......x---.............::.:::..............x........x.:..x..:-....---.....::xx...:...x...------:.:.::::.:x........x:-...:.:.......x..:.x...x.x.:..:xxx....---.........x..........x..::.x....:----------------.:..:.................x:..................................:x.:..::. 10M1I33M1I38M5I23M1I45M3I51M1I4M3D20M6I21M1I37M3D32M16I67M 276/381 72.4% 416/94230402 0.0% 41/381 10.8% -6162447 -88067955 +9512 chr4 + 190214555 2270722 2270721 2270862 141 ACGTCACAGGCCGGCCTTGTCGCTGTAGAAGGGCGTGACATGGAACATGTAGCAGTGGGTGCACACTCGGACCGGCTTCACCTGCCCGTAGCGGGGCAGCGGTGCTGAGTGCGAGGAGCAGCGCGAGCAGAAGATCTGGAA chr4 - 94230402 8434063 8434062 8434203 85796200 85796199 85796340 141 ACGTCAGATACCGGCTTTGTCACTATAGAAGGGAGTGACATGGAACATGTAACAGTGAGTGCAAACGCGGACAGGCTTCATCTGACCATAACGAGGTAATGGCGCAGAGTGGGAGGAGCAGCGGGAACAGAAGATCTGGAA ......x.x:.....:.....:..:........x.................:.....:.....x..x.....x.......:...x..:..:..:..:.::..:..x.....x...........x..:.............. 141M 116/141 82.3% 141/94230402 0.0% 0/141 0.0% -6163341 -88067061 +7309 chr4 + 190214555 2271309 2271308 2271433 125 ACCTTCCCACAGCTGCGGCAGTGGTGCTTCCGGCGGATGACGGTGAAGGGTGCTTTGCACGCCGTGCAGAAGCCACAGGCCTCGTCTGGCACCCACTCCGGGGGGTCTGTCACAACAACAGCAGC chr4 - 94230402 8434385 8434384 8434509 85795894 85795893 85796018 125 ACCTTGCCACAGCTCCTGCAGTGGTGCTTCCTGCGGATGACCGTGAACGGAGCCTTGCAGGCAGTGCAGTAACTGCAGACTTCATCTGGAACCCAGTCAGGAGGATCTGTCAGAAGCACAGCAAC .....x........x.x..............x.........x.....x..x..:.....x..x......x.:.::...:.:..:.....x.....x..x..:..:.......x..xx......:. 125M 99/125 79.2% 125/94230402 0.0% 0/125 0.0% -6163076 -88067326 +8360 chr4 + 190214555 2273124 2273123 2273295 172 ACACGGCCACCAGC-GCAG---GCCTCAGAGCCCGTCCTGAGTGGGCACTCACCCTTCCTTAACTTTTCCTTGTCGTCTGTTTCAGGCTTGGTGGCCATGACCTCAAACAGTGTTTTAAGAATACTTCTCAGGTCACTGGCATAGTTCGTCTGCAGCTGGTCAGCCACACCTGAGG chr4 - 94230402 8447305 8447304 8447477 85782926 85782925 85783098 173 ACGGGGCTATCAGCAGCAATTCACTACAGAGGCAGTTTTAATCTGG---TTACCTTTCTTTTGCTTTTCCTTGTCTTCTGTTTCAGGTTTGGTTGCCATCACTTCAAACAAGGTCTTCAAGATACTTCGCAGATCACTAGCATAGTTTGTCTGCAGCTGGTCAGCAACTCCTGGAG ..:x...:.:....-...:---:.:x.....x.x..::.:.x:x..---.:...:...:..x:............x...........:.....x.....x..:.......:x..:..x.::.......x...:.....:........:.................x..x....::. 14M1I4M3I24M3D127M 129/169 76.3% 173/94230402 0.0% 7/169 4.1% -6174181 -88056221 +6370 chr4 + 190214555 2274058 2274057 2274231 174 ACACCTGAAATGCAGACGAACAGGCGGTGGATGAGGTCGTGGCTGCCGTGGAACCTGGACCGGATCTTCTCTCTTGTGGCCTGTGGGGCAGCATGCGTGGCTGCTGGGGCCGCCTCTGGCCCCATCTTGTCTGAGGAGCAGGACCCAGCTGTGGAGCTGCTGCATGGAGAAGGA chr4 - 94230402 8448021 8448020 8448193 85782210 85782209 85782382 173 ATACCTGAGATACAGACAAAAAGGCGGTGAATAAGATCATTGCTGCCATGAAATCTGGATCTGATCTTTTCTCGGGTGGCAATTTTAGCAGCCTGCAAAGCAAGCTGGATTTCTTCCTGATCAATGTCATCGGATGAACAAGAACTAGTCATTAAACTGCTGT-TGGAGAAAAA .:......:..:.....:..x........:..:..:..:.x......:..:..:.....:.x......:....xx.....xxx.xx:.....x...:x:..x:x:x..:::x.:..:x.x:.x..x.::..x..x..:..:..x.:..:::.x:.:......:-.......::. 163M1D10M 112/173 64.7% 173/94230402 0.0% 1/173 0.6% -6173963 -88056439 +15341 chr4 + 190214555 2305222 2305221 2305549 328 GGCCTGTGAGCTGGGGACTGGCAGGCAATGGGCGGTGAAAGCAAAGAGGACATCTCGTCCCCCGCCCTGTGGACCATGCGGCTGAGCTGCTCCAGCTCCTGGTCGTCGTACTGCATGGAGCAGGCCAGCTCTGCATCCGGGTCTTTGGCCTTAGCTGAGAGTGGCCCCTCAGGGGGGAGAGGGGCAGAGAGGGCAGGCGCCAGGGCAGCGGGTCCCTGCACGTCTGCGCGGATGGGGAACTCCACGTCTTGGGAAATGCAGAGGTTCCGTTCCAGCGTGTGCAGCTCCTCCTCCGTCAGCGTCTGCAGCAAATCCCTACGAATCAAGA chr4 - 94230402 8471936 8471935 8472260 85758143 85758142 85758467 325 GGTCTGTGAGCTGGAGACTGACAGATGCTTGGAGGGGAAAGCAGAGAAGACATTTCATCTCCAACTCTGTGTACCATCCTATTCAGCTGTTCCAGCTCCTGTTCATCATACTGCATCGAACAAGCCAGCTCAGCCTCTGTGTTCTCAGCCTTTGCTGAGA---GCTCCTTCGCTGGCAAAGTTGCAGTTATGCCCGGTGTGATGACAGAGGGTACTTCAGGATCTGTTCTGACAGGAAAATCCACATCTTGAGAGATGCACAGGTTACGCTCCAGTGTGTGCAGTTCATCCTCGGTTAATGTCTGAAGTAGATCCCTAAGAATAAAGA ..:...........:.....:...:::x.x..x..x.......:...:.....:..:..:..x:.:.....x.....x.x::.x.....:...........x..:..:........x..:..:........x..x..:.x..::.::.....x.......---..:...:x.xx..x.:..xx....xx.x.x.x..:.:x.x.:...x....x.:.xx:x:....:x.x..::..:..x.....:.....:..:.....x.....x..:.....:........:..x.....x..:.::.....x..:.:.......x....x.... 160M3D165M 233/325 71.7% 325/94230402 0.0% 3/325 0.9% -6166714 -88063688 +4050 chr4 + 190214555 2308493 2308492 2308718 226 AGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGGAGGG-GAGGGGGAGGAGAGAATGCAGAAAGAAAGAGAAAGGAAAGAAGGAAAGCAAGAAAGGAAGGAAGG-----AGAGACAGAGAGAGAGAAAGAAAGAAAGAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAA chr4 - 94230402 56098326 56098325 56098541 38131862 38131861 38132077 216 AGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAG-------------GTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAAT---AGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAA ..:x.:.x..x...:x..x...:::..:x..:..x::-:.:..:..x.x.x..x....x.x...:..-------------.x:.:.:::.x..:....:....-----....x::.::.:.::xx:::.:..xx:.:.xx..:.x....:...x---...:..xx.:....x.:...::...:....:..:..x....::.:::.:.....xx....:..xxx.....:... 37M1I29M13D23M5I46M3D75M 125/210 59.5% 216/94230402 0.0% 22/210 10.5% -53789833 -40440569 +3900 chr4 + 190214555 2308596 2308595 2308755 160 GAGACAGAGAGAGAGAAAGAAAGAAAGAAGACAGAA----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAA chr4 - 94230402 21758895 21758894 21759058 72471345 72471344 72471508 164 GAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA ...x....:..:...::..x...::.::...x:.:.----.:x:.x..:x.x:x...x..:x.x.:...x.x:x..x..x.:.....x:x..xx.::...:...............:..::.::.x.:.x.::...xxx.:......:xxx.x...::..:... 36M4I124M 96/160 60.0% 164/94230402 0.0% 4/160 2.5% -19450299 -74780103 +4057 chr4 + 190214555 2308604 2308603 2308729 126 GAGAGAGAAAGAAAGAAAGAAGACAGAAAGAAAGAAAG---------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAA--------AGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAA chr4 - 94230402 44053995 44053994 44054137 50176266 50176265 50176408 143 GGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA .:::..........::...:.....::..:.x:.::..---------:.............::x..:..x...x:x..::..x........x:.x:x:...--------.x...:...:....:.:..x.:x..:.x.:.... 38M9I54M8I34M 84/126 66.7% 143/94230402 0.0% 17/126 13.5% -41745391 -52485011 +3162 chr4 + 190214555 2308612 2308611 2308729 118 AAGAAAGAAAGAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA----GAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAA chr4 - 94230402 61334684 61334683 61334805 32895598 32895597 32895719 122 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ...:..:x.x.x::..x......:.....x......x.:x...:.:.::x:.:..:.----..x....xx..x.::...x.x.:::..x..x.:.......x.::.::.....::::.x.:. 57M4I61M 72/118 61.0% 122/94230402 0.0% 4/118 3.4% -59026072 -35204330 +4006 chr4 + 190214555 2308619 2308618 2308766 148 AAAGAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----------AGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAG----------AAAGGAAGGAAGGAAAGAAAAGAGAGAAAGA chr4 - 94230402 44053977 44053976 44054136 50176267 50176266 50176426 160 AAGGGATATGTGAAGAATGGAGGA--GAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATA------CAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ..:.:.x.::x:.....x.:.:..--........::...:.::x......:x::.:.:.----------............:.x....:x:..x.------x......x........x..x.x...:----------........:.....:..x.:x....x.:.:. 24M2D33M10I26M6D26M10I31M 98/140 70.0% 160/94230402 0.0% 28/140 20.0% -41745358 -52485044 +3186 chr4 + 190214555 2308632 2308631 2308707 76 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-------AAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..-------.::.....:..:::x.::..x............. 42M7I34M 55/76 72.4% 83/94230402 0.0% 7/76 9.2% -34549662 -59680740 +3490 chr4 + 190214555 2308634 2308633 2308705 72 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..x::..:x::...::::.:..............x........... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -22758351 -71472051 +3371 chr4 + 190214555 2308637 2308636 2308729 93 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAA chr4 - 94230402 48787367 48787366 48787459 45442944 45442943 45443036 93 GGAAGATAGGAAAAAGAAGAGAAAGGAATACAGAACTTTTTAAAAAGGAATTCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAAGAAAGAA .:....x..:..:..::.:......:..x.x....xxxxxx.:....:..xxx..::.x:x....:......:.....x..x........:.. 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% -46478730 -47751672 +3391 chr4 + 190214555 2308654 2308653 2308768 115 AAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGG chr4 - 94230402 61334684 61334683 61334798 32895605 32895604 32895719 115 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGG ..:....x.x:x:..xx:.:.:.......x......x:.x.:.....:.x:.::...x:xx:.x....xx.:x.:.:..x.x.:..:.x.:x......:..x..::......... 115M 71/115 61.7% 115/94230402 0.0% 0/115 0.0% -59026030 -35204372 +3506 chr4 + 190214555 2308670 2308669 2308779 110 AAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGA--------AAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGA-----GAAAGAGGGAGGGAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...:..:.............:::..:.::.--------......x....:xxx:.:.x...:.xx:...x.:.:...x..:.:...:..:...:.-----.:..::.:....:.x:... 34M8I57M5I19M 73/110 66.4% 123/94230402 0.0% 13/110 11.8% -28224494 -66005908 +3325 chr4 + 190214555 2308670 2308669 2308785 116 AAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAG---------AGAGAAAGAGGGA-GGGAGGAAGGAAGGA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .::........x.x...x.xx....:.x...::...x....:...:..:x..x::.x.......::x...x.:.::.x:....:...:---------.x.:......:x.-.x..:....::..:. 88M9I13M1I15M 76/116 65.5% 126/94230402 0.0% 10/116 8.6% -43046742 -51183660 +3182 chr4 + 190214555 2308686 2308685 2308786 101 AGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAAGGAAAGAAAAGAGAGAAAGAGGGAGGGAGGAAGGAAGGAA chr4 - 94230402 72111981 72111980 72112081 22118322 22118321 22118422 101 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAA ...:.....::..:..x........:...:x.x:...x..x..x:x.x:.x...:x.:....:.:..x:.xx.:.x...:..x.:.::.x.:..::..:.. 101M 62/101 61.4% 101/94230402 0.0% 0/101 0.0% -69803295 -24427107 +3170 chr4 + 190214555 2308689 2308688 2308746 58 AAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAGAAAAAAGAAAAGAAAGGAAGGAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ...::x.::...........:.........:.xx....x....:.:.:.:.....:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -5402660 -88827742 +3177 chr4 + 190214555 2331049 2331048 2331170 122 CTGGGGAGGA----AGGCAGGGGTAGACGCTGGGATGGGCTGGAAGGAGGGGGCTGGGGAGGGAGG-GAGGGGTAGATTCTGGGATGGGCTGGAAGGAGGGGCTGGGGA--GGAAGGGAGGGAGGGGTA chr4 - 94230402 83234035 83234034 83234162 10996241 10996240 10996368 128 CCAGGGAGGGCTGCAGGCAGGCACTGCTGCTTGCCTTGGGTGGGGGGAGGGGGGCGGCACCAGAGGCTGGGGGCTGTGTCCAGGA-GGGCTGGAAGGAAGGGCTGGGGGCTGGCAGAGGGGCTGGAGCA .::......:----.......x::x.x:...x.xx.x..x...::........x:..x:xx:....-x:....:x.xx..::...-............:.........:--..x..:.:..xx..:.:. 10M4I52M1I18M1D23M2I18M 81/121 66.9% 128/94230402 0.0% 8/121 6.6% -80902986 -13327416 +3924 chr4 + 190214555 2334684 2334683 2334855 172 TCCCCATCCCCTACTCTGCCCAGTCCCACACCTGCTGGCCGCTGCCCACTGGACCCTCCCCCTTCCCCCTCCCCTTCCCCCTCCCCACTTCCGCCTCCCCTCTTCCCCC---TCCCCTCTTCCC---CCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCAC chr4 - 94230402 92729536 92729535 92729705 1500698 1500697 1500867 170 tccccttcctctcctc--------ccccccccttttttcctcttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCCCAC .....x...:..x...--------...x.x...x:.xx..x..x.:xx:.xx.:::..:::...:::::.::..x.:::...:..:x:x.:.x....x:x..x:....:---..:...:....:---::.::....:.:......x.:.........:x..:.::.:.:.:....... 16M8D85M3I12M3I51M 98/164 59.8% 170/94230402 0.0% 14/164 8.5% -90394852 -3835550 +3289 chr4 + 190214555 2334694 2334693 2334815 122 CTACTCTGCCCAGTCCCA---CACCTGC-TGGCCGCTGCCCACTGGACCCTCCCCCTTCCCCCTCCCCTTCCCCCTCCCCACTTCCGCCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCTCTT chr4 - 94230402 55886058 55886057 55886182 38344221 38344220 38344345 125 CTACGCTGGCCATTTCCATTTCACCTCTATACCTCCTAACCATTATAACATGCCTTGTCCCGTTCTCCTCCCTGCTCCCCACTGCCATCCCTCCTCAACTCCCTCCTC-ATTTCCAATACCCTCTT ....x...x...x.:...---.....x:-.:x.:x..:x...:.:x.x.x.x..::x....x:..:...:..:x.........x..::.:.:....xx.:......:.-x..:..xx.x....... 18M3I7M1I79M1D17M 80/121 66.1% 125/94230402 0.0% 5/121 4.1% -53551364 -40679038 +3057 chr4 + 190214555 2334751 2334750 2334815 65 CCTCCCCTTCCCCCTCCCCACTTCCGCCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCTCTT chr4 - 94230402 46943484 46943483 46943548 47286855 47286854 47286919 65 CCTTCCCTTCCCTCTCCCAATTTCCTTTTCCCTCTGTCTGATTTCCCTTCTCTCCTTCTCCCCTT ...:........:.....x.:....x::....:::x..:xx:.:....::..:..:..:..:... 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% -44608733 -49621669 +3204 chr4 + 190214555 2334803 2334802 2334936 134 CCCCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCTCTTCCCCCTCCCCACTTCCGCCTCCCCCCCAGCTGCAAGCTCCACTAAGCTCTCTGTGGTCCACTCACTCCTCCGCCCCCGTGACCATCCGCCTGG chr4 - 94230402 93796130 93796129 93796261 434142 434141 434273 132 CCCATCTCATCCCCCCCCCACCCCCCACCCCCACCCCTCTGCCTTCCCCAGACCCTCAGCACCCTCCCAGC--CCAGCACTGCAAGGCTGCATCACCACCACCTCCTCCCAGGCCCCAACCAGCATCACCATGG ...x..:.x..::.....:x...:.:x.....x.......x..::.:..xx..:::.:x.x...:......--.x...x.::.x.:...x:x.xxxxx....::x....:xx.....x::x.x....xx.x... 71M2D61M 80/132 60.6% 132/94230402 0.0% 2/132 1.5% -91461327 -2769075 +11162 chr4 + 190214555 2339450 2339449 2339681 232 TACCTGAGCTCAAACTCTGCGAACAGGACGTCGAAGTGCCTCAGCGCTTCCCTCATCTTCTCTGTGTAGGTGTTCAGGTCCCGCAGCGCCTGGTCACGGAGGGCGCCCCGCACGTCCTCCAGGCTGCGCGTCAGCTCCTTGGCCAGCGGGCGCATGGCCATGCTCTCCAGCTCCCGGTTCATGATGATGGAGCCGGCGGCCAGGCACTGCGGGAGGGGACACACTCAGGGAG chr4 - 94230402 8484594 8484593 8484821 85745582 85745581 85745809 228 TACCTTAATTCAAATTCAGCAAAAAGGACATCAAAATGCTTGAGTGAATCTTTCATTTTTTCAGTGTAGAGGTTCAAATCTCGTAAGGCCTGGTCACGTATGATGTTTCTAACCTCCTCCAGGCTGCGGGTCAGATCCTTGGCCAATGGTCTCATCGCCATACTCTCAATTTCCCGATTCATAATAATAGAACCAGCAGCCAAACACTATGAAA----ACACATTGAGAGAG .....x.::.....:..x..:..x.....:..:..:...:.x..:.xx..::....:..:..x......:x.....::..:..:.:x...........x.x.::.:::.xx..x..............x.....x..........::..x.x...x.....:.....x.x:.....:.....:..:..:..:..:..:....::....::.::.----.....:.x..:... 214M4D14M 163/228 71.5% 228/94230402 0.0% 4/228 1.8% -6145144 -88085258 +9093 chr4 + 190214555 2341475 2341474 2341636 162 TACCTCGGCACCGAACCACAGCTGGCCGGCCAGGTTGTCGTGCCGGATCTCCTCAGGGAACTTGACGCAGAAATCTCTGGGGGCGCGGTCCTGGGGGATGCACTCATCCATGATCTGGTTAATGATGTTCAACACATTGTCCTGAAACAGAAGACAGGAGAA chr4 - 94230402 8487455 8487454 8487616 85742787 85742786 85742948 162 TACTTCTGCTCCAAACCAAAGCTGTCCTGCAAGGTTGTCATGGCGTATTTCTTCTGGAAACTTAACACAAAAATCTCGGTTGGCCCGTTCGTGAGGAATGCATTCATCCATGATTTGATTTATGATGTTCAAAACATTATCCTGAAATAAAACACAAGATAA ...:..x..x..:.....x.....x..x..x........:..x..x..:..:..x..:.....:..:..:.......x.xx...x..x..x..:..:.....:...........:..:..x...........x.....:........:.:..x...:..x.. 162M 125/162 77.2% 162/94230402 0.0% 0/162 0.0% -6145980 -88084422 +10110 chr4 + 190214555 2353929 2353928 2354085 157 TCACCTGACAGGAGCGGAACTGGCTGACCAGCAGCGTGCACCGCTGGGGGTCCTTCCGCCCATCCAGGCTGTCCAGCTCCGCGGCCACCTGGTTCAGCTCCTCGTCGGCATAGTAGAACCGGGCAAGCAGCTGCGGATCCGACCTC--TGCAGGAGAGA chr4 - 94230402 8505062 8505061 8505220 85725183 85725182 85725341 159 TTACCTGACAAGAGCGAAACTGGTTGACCAGCAGTGTGCATCTCTGTGGGTCTTTTCTTCCATCTAAACTGTCCAGTTCAGCTGCTACTTGATTTAGCTCCTCATCGGCATAGTAGAACTGAGCAAGGAGCTGCGGGTCTGTTCTCTGTGCAGAAGAGA .:........:.....:......:..........:.....:.x...x.....:..:.x:.....:.::........:..x..x..:..:..:..:........:...............:.:.....x........:..:.x:...--.....:..... 146M2I11M 126/157 80.3% 159/94230402 0.0% 2/157 1.3% -6151133 -88079269 +6812 chr4 + 190214555 2418215 2418214 2418670 456 CGGACGGGCGGTCCTGGGGAAGGGAGAGGCCGCGACGCGGGGGGCGT-CCGGCCCGAGCGGGGCCGCTCACCTTGGGTTTGTAGAGCCACTTTCGGAACCTGTTCATCATCGCCGCGCCGGCCCTGGCCGGACTCCGGGCGGCCCTCGCCCTCCGCAGCGCTGCGCCCGGGCCCGGCTGAGGCGCGGGGCGGACGCGGAGGCACGGCCGGAGCCCCCGCGCTGTCGCAGGGAGGCTGGCTAGCGAAGCCCGGAGCGCCGAG-CGGGCGGCGGGCAGGTGCGCGGGGC--AGGTGCGCGGCCCTGAGTATGCTCTGCAAGCGGCGCGCCGGGCAGACCTCAGACCCGGGAGTGGGCGCTCGGGCGCACGGA-CAGACGCGGGCACGGG-----------GGCGCGCGGCTCCTCGCTGCTCACTGACACCCAGCGCTCCGCTGGTCACGGCCGCCCCGCGCCGCACATGCGCC chr4 - 94230402 8574919 8574918 8575316 85655087 85655086 85655484 398 CGCGCGGACAGCGCTGAGGCGGCG-GCAGCCGGACCCCCGCGGCCGTGCCCGGCCGTGCCCCGCAGCTCACCTTGGGTTTGTAGAGCCACTTTCGGAACCTGTTCATCATccccg---cggccgctgcc----------ccgccgccgccgctcggagcgcgccgcccg---ccggcTGCGGC------------CACAGGGGCTGCCGG-----CTGCCCGCCCGCAGAGCGGGCTGCTCGGGGAGCGGGGCGAGCCCTGCCGCTCGCCGGGAGGCTCCGCGGGACGGAGGGTCTCAGCGCCGCCCAAGC---GAAGGCTGCGCGCC------------------------GCCGCCTCAACACACGGACCGGCCGCCGGCACGGGCAGCACCGACTGGTCCGCACCTCAGCGCCCGCCCCCAAAACATTGCG------------CGGCCGCCCC-CCCCACAACGGCGCC ..x:...:.:.:x...:..x:.x.-.x:....x:x.x.x.x..x...-..x.x...x..xxx..x..............................................x...---.....x:x...----------.x...x:....x::..x.....xx......---.......x...------------.:x...x:.x.....-----.:..x.xx:.....:.x..x:x...x.x.:...xx..x.x...xx.-..xx..x....x:.x.x......:.--...xx.x.:..x.:.xx:.x..---.x.:..x.......------------------------.x...::x::.:......-.:.x...x........-----------..:x...:x...xx...:xx:.x.::.x..x:x...------------..........-.x..:..xxx..... 24M1D22M1I67M3D11M10D30M3D11M12D15M5D46M1I25M2I22M3D14M24D18M1I16M11I36M12D10M1D15M 265/382 69.4% 398/94230402 0.0% 90/382 23.6% -6156704 -88073698 +3070 chr4 + 190214555 2429572 2429571 2429623 52 TTTCAGATCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGAGTCTCA chr4 - 94230402 66733450 66733449 66733501 27496902 27496901 27496953 52 TTTGAGATCTGTTCCTTTTTTCTTTTTTCTTTTTTTTTCAAAGAAAGTTTTA ...x......x...:..:..........:.........x.:.x.:...:.:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -64303878 -29926524 +3077 chr4 + 190214555 2434903 2434902 2434959 57 TTGTTCTCATTCACATGTGTGGAAACTGAGGCCCCACAAGGTCATGTGGCTTGTGCA chr4 - 94230402 52246025 52246024 52246081 41984322 41984321 41984378 57 TTTCTTTTTCTCATATATGTGGAAATTGAGGTCCAACAAGGTTAAATGGCATGTGCA ..x:.:.:x:...:..:........:.....:..x.......:.x:....x...... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -49811122 -44419280 +3044 chr4 + 190214555 2436095 2436094 2436141 47 ATCTATATATATGTATATATAGATATATATAGATATATGAAATTTTC chr4 - 94230402 20552383 20552382 20552429 73677974 73677973 73678020 47 ATTTATATGTATGTATAGATAGATAGATATAGATATATTCACTTTTC ..:.....:........x.......x............xx.x..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -18116288 -76114114 +6067 chr4 + 190214555 2443126 2443125 2443248 123 CCAGTTCCTCAGGTTCTTCTTCAACCCCCTGCACCTGTGCTCATGGATCAAGGATGAGTGGAGCCTCATCTACGAGCCAGCCCACGTGAAGGAGAACTGGATCGACCCCCTGATGAGGTAGGC chr4 - 94230402 8591839 8591838 8591961 85638442 85638441 85638564 123 CTAGTTCCTTAGATTCTTCTTCAATGCCTTGTATTTGAACACATGGATAAAAGATGAATGGAGTCAGTTGTACGATTCACAGTATGTAAAGGAGAATTGGATCGATCCACTGCTCAGGTAAGC .:.......:..:...........:x..:..:.::..x:.x.......x..:.....:.....:.xxx.x.....x:..xxx:.:..:........:........:..x...x.x.....:.. 123M 89/123 72.4% 123/94230402 0.0% 0/123 0.0% -6148713 -88081689 +3999 chr4 + 190214555 2451249 2451248 2451354 106 TCCCCAATCCCG-CAGCCTGACAACATCCTGGTCAAGCTGAACACCACAGCCATCCTGCGAGAAGGGGCCTTGTACCAGCGGCAGGTGGAGCAGGAGCTGCAGAGGT chr4 - 94230402 8605590 8605589 8605696 85624707 85624706 85624813 107 TTCCCTCTCCTGACAGATCGACAATTTACCTATTAAATTAAATGCAGCAGCTATTTTAAGAGAGGGTGCCCTCTATCAGCGAAAAATGGAACAGGAGCTCCAGAGGT .:...xx...:.-...x::.....:x.x.:x:.:..::.:..::.x:....:..::.:x....:..x...:.x..:.....:x.::....:........x....... 12M1I94M 69/106 65.1% 107/94230402 0.0% 1/106 0.9% -6154341 -88076061 +8848 chr4 + 190214555 2452121 2452120 2452348 228 CTTCTGTCCCTCTTTGCCCAGGGTTGATAAGCTCGTGGATGGGGCTGGGGACTTCTCTGAGTTCTTCGAGTGGCAGAAGAAGATGCAGGCGAAGGACCGGGAGGAGCAGCTGGCTGCAAGCGAGTGCCGGCGGTTGCAAGGGAAGCTTAGCCATGAGGAGGCCGTCCTAGCCCGGCAGAGCCTCATGCAGGAGAACAAGCAGAGGGTGGAGCAGCAGAAGGAGCAGGT chr4 - 94230402 8607878 8607877 8608102 85622301 85622300 85622525 225 CTTTCTTCACTCTTG---CAGAATTGAAAATCTGCTACAAGGGACTGGAGACCCATCTGAATTCTTGGAATGGCAAAAGCAGATGCGTGAAAAAGATTTGGAAGAGCAGCTGGCTGAAATAGAGTGTAGAAGGCTTCGAGGGAAACTGAGTCATGAAGAGGCAGTTCTAGCCCATCAGAATGTAATTCAAGAAAATAAGAAGAAAGCTGATCTAATGAGAGAAGAGGT ...::x..x.....x---...::....x..x..xx.:x.x...:....:...::x.....:.....x..:.....:...x......:x.x:..:..::x...:.............x..xx.....:x.:x..:.x.:......:..x..:.....:.....x..:.......:x....::x.x..x..:..:..:...x...::.:x..x.x:xx..::..:x.... 15M3D210M 152/225 67.6% 225/94230402 0.0% 3/225 1.3% -6155757 -88074645 +3046 chr4 + 190214555 2453978 2453977 2454014 37 TAATTTTTGTTTTTTGGTTTTTGGTTTTTTTTTCTTT chr4 - 94230402 48640837 48640836 48640873 45589530 45589529 45589566 37 TGGTTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTT .::..............................:... 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -46186859 -48043543 +3538 chr4 + 190214555 2454535 2454534 2454613 79 TACAATCTACTCTCTTAGCAATTTTTCTTTTTTTGTTGTTTTTTTTCTTTTTTTTTTTTGTTTTTTTTTTTTTTTGGTT chr4 - 94230402 4471255 4471254 4471332 89759071 89759070 89759148 78 TGCAATCTAGT-TCTCAGCAATTTTTCTTTATTTGTCATTCTTTTTCCCTCTTCTTTCCTTTTTTGCTGCTATCTGACT .:.......x.-...:..............x.....::..:......::.:..:...::x.....x:.x:.x.:..::. 11M1D67M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% -2016720 -92213682 +3068 chr4 + 190214555 2454553 2454552 2454607 55 CAATTTTTC---TTTTTTTGTTGTTTTTTTTCTTTTTTTTTTTTGTTTTTTTTTTTTT chr4 - 94230402 81709517 81709516 81709574 12520829 12520828 12520886 58 CAGTTTTACCCATTTGTTTGTTGTTATTGTTCTTTCATTTTTTGGTTTTTTTTTTTTT ..:....x.---...x.........x..x......:x......x.............. 9M3I46M 47/55 85.5% 58/94230402 0.0% 3/55 5.5% -79254964 -14975438 +3101 chr4 + 190214555 2454562 2454561 2454635 74 TTTTTTTGTTGTTTTTTTTCTTTTTTTTTTTTGTTTTTTTTTTTTTTTGGTTTTTGTTTTGTTTTTGTTTTTGT chr4 - 94230402 67803894 67803893 67803967 26426436 26426435 26426509 74 TTTTTTTGTTTGTTTGTTTCTGTTGCTTTCTGATTTTTTTTTTAATTTGCTTTTTATTAAATTCATCTTTGTGT ..........xx...x.....x..x:...:.x:..........xx....x.....:..xx:..:x.x...x... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -65349332 -28881070 +3248 chr4 + 190214555 2454564 2454563 2454624 61 TTTTTGTTGTTTTTTTTCTTTTTTTTTTTTGTTTTTTTTTTTTTTTGGTTTTTGTTTTGTT chr4 - 94230402 26671549 26671548 26671609 67558794 67558793 67558854 61 TTATTGCTGTTGTTTGTTTGTTTGTTTTCTGCTCTTTTTTTCTCCTGCTTTTTGTTTTATT ..x...:....x...x.:.x...x....:..:.:.......:.::..x..........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -24216985 -70013417 +3332 chr4 + 190214555 2462155 2462154 2462217 63 TCAAACAAACAAACAAACAACAACAACAAAAATTAAAGAAAAGAAAAAAAGAGCAAAAGGGTA chr4 - 94230402 72680392 72680391 72680454 21549949 21549948 21550011 63 TTAAAAAAACAAACAAACAACAACAACAAAAAACAATAACAAGAAAGAATGTGTACATGTGTA .:...x..........................x:..x:.x......:..x.x.:.x.x.x... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% -70218237 -24012165 +3766 chr4 + 190214555 2475241 2475240 2475314 74 CTGCAGCTTCCAACTTCTGGGTTCAAGAGATCCTCTCACCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:....::xx.:..............x.x.:.x.xx:x........::...........::.....x.:.... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -15721885 -78508517 +3902 chr4 + 190214555 2476857 2476856 2476938 82 CTTCAACCTCCACCTCCTGGGTTCAAGTGATTCACCTGTCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGGGCAGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT-----GCACCAC ..x..:..:xx.x..:.............x.....xx.x........::.:.........:.:....x..-----....... 70M5D7M 60/77 77.9% 77/94230402 0.0% 5/77 6.5% -15720269 -78510133 +3278 chr4 + 190214555 2488899 2488898 2488964 66 CTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::........x.x...x.xx.x........::.............:....--.:.x...... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% -15708240 -78522162 +6825 chr4 + 190214555 2500607 2500606 2500749 143 AACCTTACTTTCCTCTTAATCTTAATGCTTGTTGAAATACTTTCTTTTGAAGCTGGAGATGAAATTGTGGACCTCACTTGTGAATCTTTAGAGCCTGTGGTGGTTGATCTGACTCACAATGACTCTGTTGTGGTAAGTGTTGG chr4 - 94230402 8632955 8632954 8633094 85597309 85597308 85597448 140 AACTTTACT--CCTGTCATCTCTGATTTGTGTTCTAACA-TTTGTTTTTAAGCTGGTGAAGAAGTAGTAGATCTCACATGTGAATCTTCTGATCCTGTAGTAGTTGATCTAACTCACAATGATTCTATTGTGGTAAGTAGTGG ...:.....--...x.:.x:::.:..x:x....xx..:.-...x....x.......x..x...:.x..:..:.....x..........:x..x.....:..:........:...........:...:...........:x... 9M2D28M1D103M 107/140 76.4% 140/94230402 0.0% 3/140 2.1% -6132348 -88098054 +4653 chr4 + 190214555 2505624 2505623 2506112 489 CTTGGGTCATGATTTCCATCATCTT--------------AGACCTGTTGGTGCTGAG------------------------------GTTTTCTT------------------------------TAACCATTGGTAGTCTAGACATCAACATGAGCTTCAATCATGGTCTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGTTTCTCACTGTCACTCAGGCTAGAATGCAGTAGCGTGATCTCAGCTCACTGCAGCCTCTGCCTCCTGGGTAGCTGGGACTATAGGCATGCACCACCACGCCCAGCTAATTTTTG-TATTTTTTGTAGAGACAGGATTTTGCCATGTTGTCCAGGCTGGTCTCGAACTCCTGACCTCAAGTG------ATCCACCCGGGTGGT-------------CTGCCATTTTTAAATCACACAACACATTTTGTCATGGGTAAGACCCACG-CATGGAAGCT----AGGCAGTTTTTGCCCTGAACATCTTGAACAGTCAGCTTGAGTT--------------------TTCTGCAAGTCAGCAAG----CCTTCAA--ACATAACCCTTGAGGCCATCAGATACAGTTT chr4 - 94230402 59859699 59859698 59860214 34370189 34370188 34370704 516 CTCGGGTCATGATTTCCATCATCTTCTTGCGAATCTGCCGAACCTGCTGATGCTGGGCATACGAGGTCTTGCGGATTTGGTTATTACGCTTCTTTGTGAAACCCACACAGAAGAGGCGCAGTAGGTAACCATCCGTAGTTTTGACATCCACGTGGGCTTCAATCATCGTCT---------------------------------------------------------GGAAAAGAAACAGT---------TATGCCCATGACAG-----GCCTCC----------------CAGACGTGCACC-TGACATTCA-TTAATATCCGCCAATACCATCAGAAACAGCTTTAGGGCAC---------ACCAGTAGCCACTTCCTTTCCTAAAGAGGAAAGCAGTAACGCAGACCTTGTTCTTTACACACCTGCCACTTCTTCACCATGGAACACATTTTGTCGCGGGTGAGGTCCATTCCATGGAAGTTGGTCAGACAATTTTTCCCCTGAACGTCCTCAGTTATCAGCTTAAATTTACGGAAGGCAACCTCATCGTTCTGCAGATCAGCCAGACTCACTTCAAATACACGACCCTTCAAGCCATCAGAGGCAATTT ..:......................--------------::.....:..:.....:.------------------------------.:..::..------------------------------.......:x.....:.x......x..:..:...........x....---------------------------------------------------------..xx.::.x:....---------.xx..:..:x:...-----......----------------:..:.:......-:x..:::..-:....x.::.-:.x.x::xx:...:....xx..xx.x..:---------:.::..xx.x.x:....xx...x...x.------.x:x..x.:.::xx.-------------......:..:.xx.:..::x.............::....:..::...:x-........:.----..:..:.....x........:..:.x.::x:.......:.:..--------------------.......::.....x..----x......--...::......x.:.........x:..:... 25M14I18M30I8M30I46M57D14M9D14M5D6M16D12M1D9M1D10M1I29M9D28M6I15M13I49M1I10M4I43M20I17M4I7M2I31M 275/391 70.3% 516/94230402 0.0% 223/391 57.0% -57354075 -36876327 +3521 chr4 + 190214555 2508531 2508530 2508613 83 CTGAGAGGCCAGGCTGTGGTCGTTGGTTTTGTTTTTTTGTTTGTTTGGTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTGT chr4 - 94230402 26977552 26977551 26977634 67252769 67252768 67252851 83 CTGTGAAGGGAGGCTGCCTGCGCCTGCTTTGTGATTTTGTTTGTTTGTTTGTTGTTTTGGTTTGGTTTAAATCTTGTTTATGT ...x..:.xx......:xxx..::x.:.....xx.............x..x........x....x...:xx.:......x... 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% -24469021 -69761381 +3991 chr4 + 190214555 2513081 2513080 2513149 69 AGGCCCTCAGGTACTGTCAGTTGTCCCATCTGCATGGACGGATACTCAGAGGTAAGTAAACCAAGCTGT chr4 - 94230402 8639240 8639239 8639307 85591096 85591095 85591163 68 AGGCCTTCTGGTACTGTTAGCTGTCCAATTTGTATGGATGGTTACTCGGAGGTAAG-GATCCACGCTGT .....:..x........:..:.....x..:..:.....:..x.....:........-:.x...x..... 56M1D12M 55/68 80.9% 68/94230402 0.0% 1/68 1.5% -6126159 -88104243 +10309 chr4 + 190214555 2513650 2513649 2513844 195 TTCTTTTTAATGCCTTCTAGATCGTGCAGAATGGACGTCTCATCGTTTCCACAGAATGCGGCCATGTCTTCTGTAGCCAGTGCCTCCGTGATTCCCTGAAGAATGCTAATACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTACCACCCCATTTATATATGAAGTATTCAGAGCCCCCCAGGAGAGA chr4 - 94230402 8639690 8639689 8639876 85590527 85590526 85590713 187 TTCTTTT------CTTCCAGATTGTGCAAAGTGGACGACTTATTGTGTCAACCAAATGCGGCCACGTCTTCTGTAGTCAGTGCCTCCGCGACTCCCTTAGGAACGCCAACTCCTGCCCAACTTGTAGGAAAAAACTCACTCATAGACAATACCATCCGATTTATATATG-AGTACTTACA-TTTCTCAGGACAGA .......------....:....:.....:.:......x..:..:..x..x..x:..........:...........:...........:..:.....x.:...:..:..:x.:....................:x...x:..:.:..::.....:..x...........-....:.:.x.-:::.:.....x... 7M6D156M1D10M1D14M 147/187 78.6% 187/94230402 0.0% 8/187 4.3% -6126040 -88104362 +3505 chr4 + 190214555 2520118 2520117 2520176 59 ACTGTTTTGCAATTGACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGGAACAGCATCTT chr4 - 94230402 34766063 34766062 34766121 59464282 59464281 59464340 59 ACTGATTTGCAAATGGTTCTTCTTCTTCTTTTTTTTTTTTTTTTGTAGAACATCATTTT ....x.......x..::.::.:..:..:................x.:.....x...:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -32245945 -61984457 +3172 chr4 + 190214555 2520228 2520227 2520298 71 TGCAGCTTTGACCTCCCGGGCTCAAGTGATCCTCCCACCCCAGCCTCTCAAGTAGCTGGGACTATAGGCAC chr4 - 94230402 18197127 18197126 18197197 76033206 76033205 76033276 71 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .:....::x:.x..:.:...:.......x.:.x.xx:x.:......:............:....:.x.::. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -15676899 -78553503 +5637 chr4 + 190214555 2536629 2536628 2536713 85 CCCCCGACGTAAACTGGGATCCCTTTCCCCTTGTGTCCGCCATATTGGACTCTAACTCTGGTCAGCCGCGGCGCCGGGACTGTGG chr4 - 94230402 8656833 8656832 8656914 85573489 85573488 85573570 82 CCCCCGACGTAAGGGGGGATCACTTTCCCCTTGTGTCCGCCATATTGGACGGTAACTCTGGTCA---GCGGCGCTGGGGCCGAGG ............:xx......x............................xx............---.......:...:.:.x.. 64M3D18M 72/82 87.8% 82/94230402 0.0% 3/82 3.7% -6120204 -88110198 +6370 chr4 + 190214555 2536792 2536791 2537602 811 GCGCAGCGCCCCCCGGCTGGCCGGAGCGCCCGCCGCCGCGGCCGCCTCAGCCTCCCCGCCTTCCCCGCCCTCCGCCGCCGCCCGCGGCCCCCGCGCCCGCTCTGCGCCCCTCTCCCCGCCC--GCCATGAGCCCAGCCGACGCCAAGCGCGGGGCCAAGCGCCGGAAGAACAAGCGGGGCGGCGGCGGCGGCTCGGG----CGGGGGTAACGGCGGCGCGAGCAGCGGCAAGGCCGGCCCGGCGGCGGCGCTGCGCGGTTCCCAGGCCGCGGGCCTGGCGGCCCCGGGCAGCGCGGCAGGCCTGGTGGGCGGCGCGGCGGCGGCCAACGGGCCTCTCGGCGCGGGCGCGAGCGCGGGCGGCGCCGCCCCCGGAGGCTACTTCGAGGTAAGCGGCGGCAGCGGGCAGGGGTCGATGGCGGTACGCGGTTGCCGTTCCCTCGCGCCTTGGCGGAGCTCGGCCTCCC-----GCTGTCGGC-CCCGGGCCTGGGAGCGGGATGCTGC----GGGCGGGCGGAT--AACGGGTCCTGCGGCGCTGCGCTTGCCGAGGTCCCGGGGCAGGGCGGCAGGTGGGCCGTGCTCGGCGTGACGCGGCCTCTGTCAGCCTCTTGAGAGGAGAACCTGAGCAGAGGCGGCG----GGAGGGCTAC-------------ACCGG---GGCCGCCGCTCACGGC--GACGGGCTGGTCCGCAGGCTGGA--GCAGC----CCCTCAACGG-----------GCGGGGACGTC---TCCGGGGTGCAGCTCCGCGCACGGCGCTTCGCCTTCCG----CTGGACCCGGCGGGTGATACCCGCGAGGCCCGGGCTTCTGTCGTGGCGCCTCGCCCGCTGCGGCGGTTCCA chr4 - 94230402 80391195 80391194 80391928 13838475 13838474 13839208 734 GCGGGGAGCAGCCCGCCCGCTCGG---GCTCGCCGCCCCTGCGCGCACCGCCGCTCCCTCCTTCCCGCCCTTCACCGAGGCCGGGGGCTCCTGGGCCCGTT---------TCTCGCCGCCCGGGGTACGGGGCCGACCCGCGAGCAGC----GACCgcgcggcgg--gaaggggc-gggcggcggcggctgttgggagccccggggctgcgcgcgggccgaggcgcgtgagga-------gaaggcagcgcggagcggggcccggg--gcgg-----------cggggtgaggcggctgggacggggGGTGGTCCTGCGGCGG-----------------GCAGGCGGGAGC---AGCAGTGC--------------------GTGTTAGCGGTGGTGCCGGGC----------GGCGGTTCGCCGACTCCGTTCATCCGTCGCTCCG------TCCGTCTCCTTGCAGGCTGCCGACGCCCGAGGGAAGGAAAAGGACTCTTCTCCGAGGCGCGGGGACGAAGCGGGACCCCTGGCGTTTCATGTTCCGCCGGCCC-------GACGGCATTTTGGCGTTGAT--------TCCGACCTGCTCCCACCT----------GCACCCGGGCAGCGACGGGGAGGAGGAGGGGCACCGTCCCGCCATGTCCCGGTACGGCCTCCGCAACCTGCTGGACTGGCTGTACGGCGGGGTGGACCCCAGCTTCGCCGGCAACGGAGGGCCGGAGTGCGCGGCCTTCCTGTCCGGGCGGCAGCGCGCCGTGGAGAGCCTGGTGTTCCTCAGCCTGGGCGCTGC------------CGAGATCC---------TCCTGGCGCTCTGCAAGCTGCGGCAGCTGCA ...x:.x..xx....x.:.x:...---..:.......x.x..xxx.x.x...x.:..x:.:.:........:.:...xx...x.x...:..:.x.....:.---------....x......--.x:.:.:.x..::..x:..xxx...----.:..:x...x...--...x::..-.............x.:.x..:----.....x.:xxx....xx....xx...xx.:.:-------.:x...:....x.x....xx...:..--....-----------.x...:::x.....x..xx:..x...:..:x.x.......-----------------..:....x....---:..:.:..--------------------:x..x.....:..::x.....----------......x...x.x:x......x::..:xx..:x.------..x.:....:-----....:..:.-....:.xxx:...:x:...:x..x.----:....x.x...:--.:....x..:x:....:.x.::x.x...xx.x...-------.:.....xx.x...xx..x.--------:x..:...x:x:.x:...----------.x...:.:....x.:...x.----......x:..-------------x....---....x....xxx.x..--...x.....xx.x..:..x....--x....----..xx......-----------...x..x.x..---......xx.....x.xx..::x:.x..:.x.:x....x----....:.x.x..------------....::..---------..x......:::..xx........:.:.x.. 24M3D74M9D11M2I25M4D13M2D8M1D21M4I32M7D26M2D4M11D40M17D12M3D8M20D21M10D34M6D10M5I9M1I25M4I12M2I35M7D20M8D18M10D20M4I10M13I5M3I16M2I23M2I5M4I10M11I11M3I38M4I11M12D8M9D31M 448/670 66.9% 734/94230402 0.0% 205/670 30.6% -77854403 -16375999 +11005 chr4 + 190214555 2536859 2536858 2537332 474 CCCTCCGCCGCCGCCCGCGGCCCCCGCGCCCGCTCTGCGCCCCTCTCCCCGCCCG-----------CCATGAGCCCAGCCGACGCCAAGCGCGGGGCCAAGCGCCGGAAGAACAAGCGGGGCGGCG------------GCGGCGGCTCGGG---CGGGGGTAACGGCGGCGCGAGCAGC---GGCAAGGCCGGCCCGGCGGCGGCGCTGCGCGGTTCC----CAGGCCGCGGGCCTGGCGGCCCCGGGCAGCGCGGCAGGCCTGGTGGGCGGCGCGGCGGCGGCCAACGGGCCTCT--CGGCGCGGGCGCGAGCGCGGGCGGCGCCGCCCCCGGAGGCTACTTCGAGGTAAGCGGCGG----------------------CAGCGGGCAGGGGTCGATGGCGGTACGCGG------------------------TTGCCGTTCCCTCGCGCCTTGGCGGAGCTCGGCCTCCCGCTGTCGGCCCCGGGCCTGGGAGCGGGATGCTGCGGGCGGGCGGATAACGGGTCCTGCGGCGCTGCGCTTGCCGAGGTCCCGG chr4 - 94230402 8657502 8657501 8658023 85572380 85572379 85572901 522 cccttcccctcctcct----tctcctcctcccccccgctccctcctccccGCCCGGGTGTCAGGCGCGATGAGTCCGGCCGACGCCAAGCGCGGAGCCAAGCGCCGGAAGAACAAGCGGggcggcggcctcggcagcagcggcgggccgggacccagcggcggaggcggcgccggaggcctgggcaaggccggggccgcggcgg----gagcggtccctctgcgggctgcgagccaggcgg---cggccggctcgccgagcgcggtgggcggcctgctgacagcc--ccggccgccggcagcggagccctgggcggtggcggcggggcggcggcggGACACGGCGAGGTGAGGCGCGGGCCGCCGGGATATCCGCACGCCCCCCGGGCGGGCG-CGATGAGGGAAGGGGGAGGAAGGGAAGCAGGGAGGGGGGCTCGTCGTGCCATC-CGCCCT------------CTCCTCGCTGCCCTTCGCCGGCCCGGGGGTGGGGGGA-GCTGGGGAGAGGCCCCCGGGGGCTGCGGGGATG-----GGAGAGGCCCCGG ....:.x..x..x..:----:.:..x.x:..x.:.:..x...::...........-----------.x.....:..:.................:...............................------------.......x:....---.:.x..:::x........x:.x:..---...........xx.x.......----.x.....:..----.:...:...:...x.....---...x.:..x..x.::..x:..........x:.x:.:.:...--.x....x.:--.:...x:.x.x:.:...xx.......xx..xx.x.x:..x:..xx......:..xx....----------------------.xx.....:..x.-.....:x..x.x.x..------------------------.:.:...x..x..-....:.------------.::.:.....:.xx:.x.x....:...:.:...:x.x-..x..x.:.x..x:xx....xx......x.x..-----.xx....:..... 16M4D35M11I60M12I13M3I25M3I22M4D10M4I19M3D41M2D9M2I60M22I13M1D16M24I13M1D6M12D37M1D33M5D13M 316/441 71.7% 522/94230402 0.0% 114/441 25.9% -6120643 -88109759 +3911 chr4 + 190214555 2536874 2536873 2537110 237 CGCGGC-CCCCGCGCCCGCTCTGC----GCCCCTCTCCCCG----CCCGCCATGAGCCCAGCCGA-------CGCCAAGCGCGG-----------GGCCAAGCGCCGGAAGAAC---AAGC-------GGGGCGGCGGCGGCGGCTCGGGCGGGGGTAACGGCGGCGCGAGCAGCGGCAA--GGCCGGCCCGGCGGCGGCGCTGCGCGGTTCCCAGGCCGCGGGCCTGGCGGCCCCGGGCAGCGCGGCAG-----GCCTGGTGGGCGGCGCGGCGGCGGCC chr4 - 94230402 32435925 32435924 32436195 61794208 61794207 61794478 271 CGCGGCGCTCCGATCCCGCAGTGCAGCGGTACTTTTCCACGGCGGCTCAccccggggccggccgggcggcggcgctgtgcgcggcggggcccctcgggcccgtgccggagcagccgcaggccgcccccgggccggc--tggcggcgcATGCGCGG----CGGCACCCCGGAAGGAGGCGGTGGGCCGGGCCGGCTGCTGGGCCGAGCGGCGGTTGGGCTGCGGGACCGGCGGCGCGGGGCGAGGCGGCGGAATGAGCCT----GGCGGAGTGACGGGAGCC ......-.:...xx.....xx...----.:x.:.:...x..----.:.:..x:.:.x..:....:-------...::x......-----------..x.xx.:......:x.:.---.:..-------...x....--:......x.:x...x..----....:x.x..::x:.x...::--......x.....x..x.x..:.x....:xx:::...:.....x.:......x.x....::x.....:.-----....----.....x.:.:...x:... 6M1I17M4I13M4I20M7I12M11I19M3I4M7I8M2D17M4D21M2I68M5I4M4D18M 156/227 68.7% 271/94230402 0.0% 54/227 23.8% -29899051 -64331351 +3742 chr4 + 190214555 2538290 2538289 2538359 70 CTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCATGCGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:.........:.x...x.xx.x........:..:.........:......--.:...:....::.. 54M2D14M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% -15658849 -78571553 +3200 chr4 + 190214555 2538979 2538978 2539048 70 CTCCCGGGTTCAAGCGATTCTCCTGCCTAACCCTCTCAAGTAGCTGGGACTACAGGTACCTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.:.........:.x...x.xx.x..x.x...:............:......x..:.--:....::.. 59M2D9M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -15658160 -78572242 +3434 chr4 + 190214555 2548532 2548531 2548614 83 CTGCAGCCTCCGCCTCCCAGATTCAAGTGATTCTCATGCCTCAGCCTTCTGAGTAGCTGGAGTTATAGGGATGTGCCACCGCG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:.....:xx:x..:.::.:........x...x..x.x.........:::..........::..:.x.--..::....:.:. 69M2D12M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -15648594 -78581808 +3116 chr4 + 190214555 2548909 2548908 2548952 44 AAACTTTTTAGTTTACTTTTTTGTTTTTTTTGTTTGTTTGTTTT chr4 - 94230402 53055638 53055637 53055681 41174722 41174721 41174765 44 AAACCTTTTAGTGTTCTGTTTTGGTTTTTTTGTTTGTTTGTTTT ....:.......x.x..x.....x.................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -50506729 -43723673 +3008 chr4 + 190214555 2568950 2568949 2568991 42 TTTCTTTTGTTGTTGTTGTTTTGCTTTTTTTTTTTTTTTTTT chr4 - 94230402 75733746 75733745 75733787 18496616 18496615 18496657 42 TTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTTT ...:.................x.:......xx.......... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -73164796 -21065606 +3154 chr4 + 190214555 2590458 2590457 2590545 88 CATCTCAAAAAAAAAAAACAAAAAAAAACAAAAAAAAACAAAAAAAAACAAAAAAAAAACAAAACAAAATTAAAAAACAGAAAATTGT chr4 - 94230402 65670922 65670921 65671002 28559401 28559400 28559481 81 CATTTCAAGCAAAACACAAGGAGAAAAACACAACATTCCAGAAAAAAACAAAAAACAAACAAA-------CAAAAAACACCAAAGTAT ...:....:x....x.x.x::.:.......x..x.xxx..:..............x.......-------:........xx...x.:. 63M7D18M 60/81 74.1% 81/94230402 0.0% 7/81 8.6% -63080464 -31149938 +3043 chr4 + 190214555 2590465 2590464 2590535 71 AAAAAAAAAAACAAAAAAAAACAAAAAAAAACAAAAAAAAACAAAAAAAAAACAAAACAAAATTAAAAAAC chr4 - 94230402 10856132 10856131 10856202 83374201 83374200 83374271 71 AGAAGGAGAGAACAACAATAACAAAACAAAACAAAAACAAACAAACAAATACCACAGATAAATCAAAGAAC .:..::.:.:.xx..x..x.......x..........x.......x...x.x..x.:xx....:...:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -8265667 -85964735 +3322 chr4 + 190214555 2590472 2590471 2590540 69 AAAACAAAAAAAAACAAAAAAAAACAAAAAA---AAACAAAAAAAAAACAAAACAAAATTAAAAAACAGAAA chr4 - 94230402 30582006 30582005 30582077 63648326 63648325 63648397 72 AAAGCAATGAAGCATAAAAAAAAACCAAAAAAACAAACAAAAAAAAAACAATACAGCTGTAAGAAAAAGGAA ...:...x:..:x.:..........x.....---.................x...:xxx...:...x..:.. 31M3I38M 54/69 78.3% 72/94230402 0.0% 3/69 4.3% -27991534 -66238868 +10670 chr4 + 190214555 2596078 2596077 2596309 232 TTCCAGACTCCTTTTAGTTTTGGCATGAATCATAGGACACCACCCTACCCTGCTGGGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAGACTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGAAGGAGGAGAGGCATG chr4 - 94230402 8688138 8688137 8688366 85542037 85542036 85542265 229 TTGTAGACACCATTTACCTTTGGCTTGGGCCAAAGGGCACCG---TATACAACTGGCGAGCACTGTCTTCTTTGTAGAAGTGAACGCAAAGATAGTTCGCTTTCAGAGAGCGGAATAAAAAATTCTAGCAAAACAGCACTTTCCACATCTCCAAAAGCAAACAATATGCTGCATCTTCCACTGTGGGTGTGTCCGGACTGTAGACGAACAGTCGAAAAGGAGGAGAGGCATG ..x:....x..x....x:......x..:::..x...:....:---..:x.x:....x..x:.:........x..:...........x.....:xxx..::.:.:......:.....x..:.x.x.x......x::..x.......::x....x..:.xx....:::.......:..x..............:........:x.xx.:..x..x..:................ 42M3D187M 166/229 72.5% 229/94230402 0.0% 3/229 1.3% -6092060 -88138342 +3894 chr4 + 190214555 2603918 2603917 2604000 83 CTGCAACCTCTGCCTTCTGGGTTCAAGTGATTCTCATGCCTCAGCCTTCTGAGCAGCTGGGATTACAGGCGTGTGTCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x................x...x..x.x.........:::..:......:.:....--....:::...::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -15593208 -78637194 +11413 chr4 + 190214555 2626395 2626394 2626582 188 TGTGTTGTC-TCACAGAGAAATTTCGGCAGAGGCGGACCGGGAACCTCAGCAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGAGCTCGTGGATAGGTACA chr4 - 94230402 8690822 8690821 8691010 85539393 85539392 85539581 189 TGTTTTGTCATTGCAGAGAAATTTCAGCAGAGACTGAACGTGAATCTCAGCAGCTTCAAAATTACTGGTCAGAAGTAAGATACATGGTTCGATGTATATATCGCCAAGCTGGGACCCCTTTGGCAGACGACCAAGACCAATCTTTGGTACCAGATAAAGAAGGAATGAAAGAGCTGGTGGATAGGTATA ...x.....-.::............:......:.x..x..x...:..........x..:..:..............:x.x....:...x..x..:..x..:.....:..x..:.....x:.......:.....:.....:...:....:..x..:..:..:...:....:.....x...........:. 9M1I179M 149/188 79.3% 189/94230402 0.0% 1/188 0.5% -6064427 -88165975 +3005 chr4 + 190214555 2628618 2628617 2628693 76 CAGAGTAAAATCCAAAGAAAAACACAAAAAAACAACAAAGTTAGGTTTCCTAGTGAGTATTAGGAAAAAATGTATA chr4 - 94230402 27793704 27793703 27793779 66436624 66436623 66436699 76 CAAATTAAAATCCTGAAATAGGTAAAAAAAGAGGACAGATCTCTGTTTCCAGAGGCGTATTAAGAAAAAATATATA ..:.x........x:.:.x.:::.x.....:.x:...:.x:.xx......x::x.x......:........:.... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -25165086 -69065316 +13158 chr4 + 190214555 2630930 2630929 2631183 254 TGCAGGCTCTGCGAGAGGGACCCCTACCAGCTGTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTGCTGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACCTTCCTTGGCACTCTGGTAAGA--GAGAAAAC chr4 - 94230402 8694189 8694188 8694444 85535959 85535958 85536214 256 TACAGGCTTTGTGAAAGAGATCCATATCAGCTTTACCAACGGTTGGAACAGCAAGCTAGAGAATATGTACTTGAAATGAAGGTTCGTCTGCTCAGACACTTGTCACTGGGATCTAAAGTTGCATCAACATTAGCAATACAAGGGCCACCGCAGGCACATCAGTTCATCTCACTCCTACTTGAAGAATACAGTGCTCTCTGTCAGGCAGCATGCACAATCAGCGCCTTCCTAGTTACTCTGGTAAGACTAAGAAAAC .:......:..:..:..:..:..x..:.....x.....:..x:..............x....:.....:..x..:........:..:......x.:..x:....:x:x.x:x.:..:..x:x:x..x...:x.xxx.:..:..x..:.....:..:..:...........x.....:.....:..:...:.:..:.....:.....x...:..x.x......:.......x.x:............--:....... 246M2I8M 187/254 73.6% 256/94230402 0.0% 2/254 0.8% -6063259 -88167143 +8782 chr4 + 190214555 2639733 2639732 2639862 130 AGGAAAATGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACTGCATAATAAACACCTGTTTGAAAATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGGTGTCACAGATCAGGTA chr4 - 94230402 8696759 8696758 8696888 85533515 85533514 85533644 130 AGGAAAATGAACATTTGAAGAAATTTCAGGTGACATGGGAATTGCACAACAAGCATCTGTTTGAAAATCTGGTATTTTCTGAGCCACTCCTGCAGAATAGCTTGCCAACATTAGTGTCACAGCTAAGGTA .............:.....:..:..:..:.....:......:....:..:..:..:.................x.....x........:..x....::.:......x:..:.:.........x.x..... 130M 106/130 81.5% 130/94230402 0.0% 0/130 0.0% -6057026 -88173376 +5830 chr4 + 190214555 2657783 2657782 2657888 106 TTTTTACATCCCCTTACTAGATGACAATGAAAACCAAGCAGCGCATGTTAACAGAAGACTGGGAGCTTTTTAAACAAAGAAGATTCATTGAAGAACAGGTAAGCTT chr4 - 94230402 8703645 8703644 8703749 85526654 85526653 85526758 105 TCCTTAAATTCTGTT-TTAGATGGCAATGAAAACAAAACAACGCATGCTGAAGGAAGACTGGGAATTTTTTAAACAGAGACGTTTTATTGAAGAGCAGGTAGGATT .::...x..:.:x..-:......:..........x..:..:......:.:.x:...........::..........:...x.x..:........:......:.x.. 15M1D90M 81/105 77.1% 105/94230402 0.0% 1/105 1.0% -6045862 -88184540 +23314 chr4 + 190214555 2659518 2659517 2660096 579 AGGGTCTTGCAAGATTAAAGCA----TTTTAAAATTTCCTCTAGTTAACCAATAAGAAAGCAGTTACTGGCGAGAACAACTTCACAGACACCATGAGGCACATGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCAACTGCAACTACAGGAGAAGGTAAGGCTGGGTTGT------GGTGTCAGCACGACTGGCCCATTGGACCTTCACTGGGCTGAGTGGAGGCCTAGAACCG--ACCCTTAGAGAGCATGGTCTAGTCTTGTGCATTGGTTG--GCTTGG------TAACTGTC------CTTAATTCCTGATCAGATGTGCTTGCGATGACTGCAGTCTCTCACACATCCTCACGTGTGGTATCATGGACCCCCCCGTCACTGATGACATCCACATTCACCAGCTCCCACTTCAAGTGGATCCTGCTCCTGACTATCTTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCTCATCCTCACAGACAGTGGCTCGGCACCAACTTTGTAAGTTGTGACTTTGTAATAAAGTTTCCGAAATTTAAGTCG chr4 - 94230402 8705217 8705216 8705806 85524597 85524596 85525186 590 AAAGACTTGCACTACTAAAACAATGCCTTTATAATTTACTTCAGCTTAATAACAAGAAAGCACTAGCTGGGGAGAACAACTTCACAGATACAATGAGGCACATGCTGTCGTCACGTTTGAGCATGCCTGACTGTCCCAACTGTAATTATAGAAGAAGGTGAGCAGATGTTTTTAACTTGAAATCATAATAAATCATTCATTT--------CTTGTGTTAGAGGAAAAAAGGAAACATTATTGCTAGAAAG---AGTCTGGTTACTTGAAGTGAATGCTACTTGAAGGTCATAAAAGTCTGCAATCTTAATTCTTGAACAGATGTACTTGTGATGACTGCAGCCTTTCACACATTTTGACGTGTGGCATCATGGATTCTCCTATAACGGATGATATCCACATTAACCCGTTACCACTGCAGATTGATTCTGCTCCGGATTATCTATCTGAGATCCGCCCACCCAGTATGTCTTCAGCAAGCTCAGGATCGGGTTCCAGCTCACCAATAACGATTCAGCAACACCCAAGGCTGATCCTCGCAGACAATGGTTCTGCACCAACTTTGTAAGTTCTCAGTTT----TAAAAATTTGGAATACTGAATTG .::.x......xx.:....:..----:....x.....x..::..:.x.x:..:.........x.x:....x.................:..x............:.:.....x..x:..........:.....:........:..:..:..:.......:..xxx:x...x.------.:x:...xx.::.x.x:::....x--------..x.xx.x..x...::xxx:...x.:--.::x:....:..---:....:..:x:x..x.x..:x..--:....:------...xx...------........:...x.......:....:...........:..:........::.x........:........::.:..::.x..x.....:.........x...x.:.x.....x..::.x...:.......x..:.....xx......xxx....:......:....x..x........:..:..x..:........x..x..x..:........:.....x.....x......:......:...:..x..................x.x.x...----....:x..:x...xx:.:.:.:. 22M4I146M6I24M8D26M2I12M3D23M2I6M6I8M6I274M4D23M 412/564 73.0% 590/94230402 0.0% 41/564 7.3% -6045699 -88184703 +19171 chr4 + 190214555 2662829 2662828 2663291 463 TTGTGTCAGTTGTAGTGATGATGAAGATGTTGCACCATTGTCAGCCAAATTTGCTGATATTTATCCATTGAGTAATTATGATGATACCGAGGTGGTGGCCAACATGAATGGAATCCACAGCGAATTGAATGGTGGCGGGGAAAACATGGCCCTGAAGGATGAGGTA-------TGGACATGGCTTCTTCGTAGCAACAATAAATGACATAAAATGATGGTCTGACATTTTAATATTTTATATTACTCTGTTTTGAAAAGTGCAAATTACAAAAGATTGTCTT----------------------------TAAAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAAGAAGCGGACGGCGAGAGTAGTGGGGAGCCCCCAGGGGCCCCGAAGGAAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCATCCTACCCAACACAGCAGGTA chr4 - 94230402 8707442 8707441 8707887 85522516 85522515 85522961 446 TTCTCTCAGTGGTAGTGATGATGAAGATGTTGCACCATTATCAGCAAAGTTTGCTGATATCTACCCACTGAATAATTACGATGATGCAGAAGTGGTAGCCAACATGAATGGAATTCACAGTGAGCTAAATGGCGGAGATGAAAACATGGCATTGAAAGATGAGGTACAACACTTAGAT-TGTCTTCTT----------------------------TTGTCTGGCATTTGGATCTTGC-----------TGCTGAAG------------AAAAGCTTGTCCTTTGCTCCCATGTTAATGAGTTAATGTTATACAGTCTCCTCAGGTGAGCAGTACTAGCAGCAGTTCCTCAGAAGCAGACGATGAAGAAGCGGATGGGGAGAGTAGTGGTGAGCCACCAGGGACTCAAAAAGAGGAAATGTCTCTAGGAAAAAGGGCATTAAGGAAAGATGAAGCAAAAATGGATAGTCCACCACCTTCTTACCCTAGTCAACAGGTA ..x.x.....x............................:.....x..:...........:..:...:...:......:......:.x..:.....:.................:.....:..::.:.....:..x.:x...........x:....:.........-------.:..:-..x......----------------------------.x.....:.....x:..x..x:-----------.x:....:------------.....x.....:.----------------------------..x...........:.:........:.....:..............x..:..............:..x...........x.....x......:.:.x:..:..:..x:x:x:x..:....:x...:xx::x....x...x..::xx...:::..:........x..x..:.....x.xx..:...... 166M7I5M1D9M28D22M11D8M12D13M28I188M 319/411 77.6% 446/94230402 0.0% 87/411 21.2% -6044613 -88185789 +3096 chr4 + 190214555 2668793 2668792 2668845 53 TCTCTTTCTCTCTCTCTCTCTTTCTCTTTTCCTTTTCCTTTTCTTTTCCTTTT chr4 - 94230402 17388732 17388731 17388784 76841619 76841618 76841671 53 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCT ..:.....xx.................::..:....:.::.....x..:.::. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -14719939 -79510463 +3208 chr4 + 190214555 2668808 2668807 2668882 75 CTCTCTTTCTCTTTTCCTTTTCCTTTTCTTTTCCTTTTTCTTTTCCTTTTTTTGAG-ACAGAGTCACACTCTGTTG chr4 - 94230402 36600614 36600613 36600689 57629714 57629713 57629789 76 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGGTATTAATTTGCTCTCTGGTG ...::...:..:.:..::.....:......:.:.:.....x....:.....x..:.-.:x:.x.::.x.....x.. 56M1I19M 52/75 69.3% 76/94230402 0.0% 1/75 1.3% -33931806 -60298596 +16529 chr4 + 190214555 2672075 2672074 2672379 305 ATTTATTGTTTCACTAA--ATAGGTATGTTTTTTTTCTTTCCTCTTA--GGCTGAACAAGCTCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGAAGCTTCTGGACTGACACCATCTGCAATGACAGCCGGAGCCCTTCCTCCTGGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGCACCTTTACCCTCACATCCATGGACATGTGCCTTTGCACACTGTTCCACACCTGCCACGCCCTCTCATCCACCCCACCTTGTATGCAACGCCCCCCTTCACACACAGTAAGGTAAGTC chr4 - 94230402 8712106 8712105 8712414 85517989 85517988 85518297 309 ACTGATTGTATTGTCAAGTATAGTGATTTTATTTTATTTTGCACTTACAGGCTGACCAAGGTCCAAATGCTTGTGAATGTCATGTTTGCAAACAAGAAGCTTCAGGTCTAACAGCCTCTGCACTTGCAACTGGACGCCTGCCTGCTGGCCATCAGTTTATGAATCCTGAAAAACCTGCACATCCTGCACTTCATCTTTATCCTCATATCCATGGACATATACCATTGCATACAATTCCCCACCTTCCTCGTCCACTTATCCATCCCACCTTGTATACAGCTTCCCCCTTTACACACAATAAGGTAAGCC .:.x.....x.::::..--....xx..x..x....x:...x.x....--......x....x......::...................:..:..:........x..x..:...x.x......x.x:..:.:...xx...x...x.............:x...::..x..:..:..::....:........x..:.....:.....:............:.:..x.....:..x:....x.....x..x..:..x..:.....:............:..:.x:.......:.......:.........:. 17M2I28M2I260M 235/305 77.0% 309/94230402 0.0% 4/305 1.3% -6040031 -88190371 +3071 chr4 + 190214555 2677387 2677386 2677433 47 TTTGGTGGGTTTTTTTGTTGTTTTGTTTTGTTTTGTTTTGTTTTTGT chr4 - 94230402 30855030 30855029 30855076 63375327 63375326 63375373 47 TTGGGTGGGCTTTTTTGTTGTTTTGTTTTTTATATTTTTATTTTTGT ..x......:...................x.x.xx....:....... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -28177643 -66052759 +3081 chr4 + 190214555 2682873 2682872 2682949 77 AGTTATCTTTTAGATGAATAATAATAAGAAGAAGATATTTTACTTTGTCTTTATTCCTTCTCTAGTATTCTTCCTTT chr4 - 94230402 21756416 21756415 21756492 72473911 72473910 72473987 77 AGTTATTGTCAAATTACTTACTAATATAATCAATATATTTTATTTTGTATCTATTTTTTTTCTGGTATTCTTCACTT ......:x.:x.:x.:xx..x.....x:.xx..x........:.....x.:....::..:...:.........x:.. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -19073543 -75156859 +17134 chr4 + 190214555 2689409 2689408 2689725 317 TGAGGCTCATAATGAATTGTCTGTCTGTAGTTTAACTACTTACCTAGGTAAACAGAATATTAATTTTGATATGTGATTAGAAAATTTT---TTTTTGTAGGCTTTACCGCCAGCACCTGTTCAGAATCACACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATACTCCAGAGTGGAATAGTTCTAAATTTATAAGTCTTTGGGGATCAGAAGTGATGAATGATAAGAACTGGAATCCTGGCACTTTCTTGCCAGATACAATTTCTGGTAAGGAATTTGTTAAAACTT chr4 - 94230402 8714691 8714690 8714998 85515405 85515404 85515712 308 TGAAGCAATTTATGATTTGAATGT-TGCTGTTGGAGTGACTGTGTAAGCAAACAGAATATCAAT----------GAGGAAAATACTCTCTATTTTTGTAGGCATTACCGCCAGCTCCAGTTCAGAATCATTCAAACAAGCATCAAGTATTCAATGCATCTCTCCAAGATCATATTTATCCAAGCTGTTTTGGGAGCACTCCAGATTGGAATAGCTCTAAATTTATAAGTCTCTGGGGATCAGAGATGATGAATGACAAGAACTGGAATCCTGCTACGTTTTTGCCTGATACAATTCCTGGTGAGG-TTTTGATATTACTT ...:..xxx.x....x...xx...-..:x...x:.x.:x:.::x..:.:...........:...----------..xx.:..x.:.:.---...........x...........x..x...........:x....:........:.................:.....:...........:.............::........x........:.................:...........::..........:................x:..x..:.....x.........:.....:...-x....x..xx.... 24M1D39M10D14M3I214M1D14M 248/305 81.3% 308/94230402 0.0% 15/305 4.9% -6025282 -88205120 +18933 chr4 + 190214555 2690692 2690691 2690989 298 TTGAAGGGAGTGAAATATTAGGGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAAGAGAAAAAGAATGCTGCAAAAAAGAAATGTTTATACAATTTCCAAGATGCTTTCATGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAGCCACGTCCTCTGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGTAGGTAAGGCTTGAAGGCTCAC chr4 - 94230402 8716262 8716261 8716559 85513844 85513843 85514141 298 TTGAAGGGAATGATATATTAACACCAGCACTCTCAGAAATAAGACCCGAAGCACTTCCCACCACGTCTAGCAATGAAGGATCAGCAGTTACTGATGGCAAAGAGAAGAAAAATGCTGCAAAGAAGAAATGTCTGTACAATTTCCAGGATGCCTTTATGGAAGCTAACAAAGTTGTCATGGCAACCTCTTCTGCTACTTCTTCTGTCTCCTGCACAGCTACTACAGTGCAGTCAAGCAGCAACCAATTCAAAGTATCATCCAAGAGACCTTCATCAATAGGTAAGGATTTGTAATTCAC .........:...x......:x:...:............:......x.....x.....xx.:x.:............:x.:.x.....:x.x...:.:........:..:...........:.........:.:...........:.....:..:........x..:..............x..x..x..x..:..x..:.....x..............:...........x....:..:...:....:...:...............:.x...:.........x..x:x:::.... 298M 240/298 80.5% 298/94230402 0.0% 0/298 0.0% -6025570 -88204832 +13172 chr4 + 190214555 2693559 2693558 2693881 323 CAGTGACTCTCGCCTCTCTAAATGCAGGTGACGTGTTTCATGGCATCAGCAAGGAGGACCACAGACACTCGGCCCCAGCCGCCCCGAGGAATAGCCCCACGGGCTTGGCCCCCCTCCCAGCGCTCTCGCCTGCTGCGCTGTCACCTGCTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCATCATTCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC----------ACCCCTACCCCCGGCCACAGATGGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGGTGAGCC chr4 - 94230402 8716843 8716842 8717159 85513244 85513243 85513560 317 CAGTTTCTTTTTTCCCTCCAAATTTAGGTGAAGTGTTCCACAATATTAATAAAGAGGACCATAGACATTCTGCACCAGTTGCACCACGAAATAGTCCTACCAGTTTAGCA---------------TCGCTTCCTTCACTGTCTCCTGCTGCACTGTCTCCAGCTTCTACGCCCCATCTTCCAAACCTTGCTGCTCCTTCTTTTCCCAAAACTGCTGCAACAGCCCCTGGTTTTGTGGATCCCCATTCAGGTCTTTGTCCTACTACGGTTGTACCTCCTACTTCCA-CCACAGACAGCTCTGTAAGTGCCCCACCAAGTGTCTGCAGGTAAGTC ....xx..:.:x:.:...:....x:......x.....:..::::..:.::..:........:.....:..x..x....::..x..:x.:.....:..:..x:.:..:..x---------------....:.x..x.:.....x........:..x..x..x..:..:..:..:..:...x....:.....x..:..x..x..:........x..x:.x...:.:.....x........:x.x.::xx::..:.:......:.----------x.:.....::..:-.......::....::.x..:.....x................:..:. 110M15D137M10I13M1D47M 216/307 70.4% 317/94230402 0.0% 26/307 8.5% -6023284 -88207118 +11323 chr4 + 190214555 2694943 2694942 2695135 193 CAGTGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGGTGTC---TACGACCCACAGCAGGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTACTGCGACTGCTGCTACTGCGAATTCTTTGGGCACGGCGGGGTGAGT chr4 - 94230402 8718310 8718309 8718505 85511898 85511897 85512093 196 CAGTGATCCTGATTGTGAGGGCCATCGCTGCGAGAACAGTAACACTTATGATCATCAACAGTATGATGGAGAGGAGAGCCAAGATGAAGACAGCTGTTCAGAGCATAGCTCAAGTACCTCAACATCCACAAACCAGAAGGAAGGAAAATACTGTGACTGTTGTTACTGTGAGTTCTTCGGCCATGGCGGAGTAAGT ......:.....:..:..:..x..:...........::..:x.---..:..:.xx..:...x.......:..x.....:xx......:........:..x.....:.....x..:.....:..x.....x...........:..x..:.....:.....:..:.....:..:.....:..x..:.....:..:... 43M3I150M 150/193 77.7% 196/94230402 0.0% 3/193 1.6% -6023367 -88207035 +17576 chr4 + 190214555 2696279 2696278 2696601 323 ACAGTTT---ATTTTTGGAGGTGT--GGTC--TGAAATTTATTATATTCAAAATTTTTAAAACTTAAGCATAACTTTGTTGTTTTTCTCAGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCAACCTAAAAAAATGGACCAGATCTCAGAAAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGGCAAGTGA chr4 - 94230402 8720039 8720038 8720356 85510047 85510046 85510364 318 ACAGTTTCGAAACCTTGAAAGTGTTAGGTCAGTGGAACTT-TTATATT---------TAGTCATTAGATATTTCTCTGATGTCCTTC--AGCCACCAGCTGCACCAACCAGTAGAAATTATGCAGAGATGCGAGAAAAACTTCGTTTACGTCTGACCAAAAGGAAGGAGGAGCAGCCCAAGAAACCGGATCAGATCTCTGAAAGGGAAAGTGTTGTTGACCATCGAAAGGTGGAAGACTTGCTACAGTTCATAAACAGCTCTGAAACCAAACCAGTTAGCAGTTCTCGGGCAGCCAAGCGAGCAAGACATAAGCAAAGAAAGGTAAGAGA .......---.x::...:.:....--....--..:..:..-.......---------..:xxx...:::..xx..:..x...::...--....x..............x.................:...x.:.....:.....:.....x........:.....:........:..:..:...x:...:........x...........:..:...........:.:......:..:...:.:.....:.....:.....:..............x.....:x.x..x.....x...........:...........:....:...x.. 7M3I14M2I4M2I8M1D7M9D30M2D241M 253/311 81.4% 318/94230402 0.0% 19/311 6.1% -6023760 -88206642 +36586 chr4 + 190214555 2699628 2699627 2700548 921 TAATTTTTAGCACTCACTGTAGTCTTAAATTGCCTTCTTTTTGCATTGGCAGCTGGAGGAGAAAGCTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGCGGCTTCAGGAGCTTCAGAAGCTAAGAGCTGTAAAAAAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAAC---TCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGGCTGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTCTTTTTTCTTCGACATCATGCAGCACCATAAAGAAGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACAGAGCCCCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTCGACCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAGAAAAGTCAACAGTAATAACAATAACAAAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAACCCAACCCCTATGGAGCCCACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATAAGAAGAAGAAAGGAGACAGAGTCAACAATTCAATTGGTAA chr4 - 94230402 8722004 8722003 8722895 85507508 85507507 85508399 892 TAATCTGTGTTACTTCCAGTAATCT--AATTGTTATTTT---------GTAGCTTGAAGAAAAGGCTCGACTTGAAGCAGAAGCCAGGGAAAGGGAGCATCACCAGTTGCTTGAAGAGCAGAGGCGGCGAGAGGAGGAAGA---------AGAAGAGAGG------CTGAAACAAGAGCTACAGCGGCTTCAGGAACTTCAGCAGTTGAGGGCTGTAAAGAAAAAGAAGAAAGAGCGAACAAATAAAGACTGTCAGAAGGTGGACGTGCTTACTCAAAACTGCCAGACAGCAAAGGAATCTGTCCCAAATGCACCTGAAGACATTCAGAATGGTACACTTGAGCAATCAGAAAAGATAGAAACCTCCTCTGGTTCACTGTCAAGACACGTGAATCACACAGAGCAGAGGCCGCTTTCGGATACAGGCTGTGAACCATCCAATGCTGTGAACACTAGAGACTCAAAACTGCTTTATCAGAAAGAGGGGAGTGTAAAGCAGCATGAGCCCCTCTCTTTTCTGCTTGATATCATGCATCAACATAAAGAAGGAAACAACAAACAGAAACTAAAGCAAATAAACAAACAGTGTGCTGAACAAGTGAAAAAGCCTGTTGAATCCTCCAAAGCATCTGAGATTCAGACTAAAACCAGAAACCAAATAGAATCCAAAGCAAAAGCAG--AACTCCCAGTGC-TTGCAGAACCTAAAAAAGAAGAGAAGAAATTAACCAACAACAACAACAACAAAAAACAGTTGAACCACATAAAGGAAGAGAAAGCA---CCCATCACAAGTGAATCCCCTTCACCAAGTGAACAGCAGCAGAATAATAAGCTAATACTTGCAGACTCTCCTCAACCAAAAGGCAAGAACAAGAAAAACAAGAAGAAAAAGGGGGACAAAGTCAACAATTCCATTGGTAA ....:.x.:x:...:x.x...:...--.....::x.:..---------.:....x..:..:..:.....x..x........:.......xxx.......:.xx..x:.x.xx..:..............:........:..---------.......::.------:.x..:x.:..::.x..............:......x..:.:..:........:..:........:...x.:x...:.........:.xx...x.....:....:...x:...:.x....:......x:..:.....:..x..:---:...:.:....:..x.....:x....x......x.x...:.:x:.........:...x::..x.::..x..:..::....:...x......xx.....:xxx:::.:x:.x.::x.x..xx.xx.x:.:x.:..x:....:........x...:.x..::x:.xx..:....x..:..x:..............x.........:.x:.:..:........x..x..............:::...:.....:..:.:...:.:x.:...:xxxx.::x:..:.x..:..::.:...:::x..::..:....:..xx.x...:xx...x.:..:x..x.::x...:.:x..:..x..:..x..:.::.--:..::.xx..x.-.::....:.xx....:...:....::...x.x.x..::..:.....:........:...:..........x.....x..:..:x..---..x.:.x.x.xx..::..x.:..x..x:....:..x........:.::.....::.:..x.....x..:.....:.....:.................:........:..:..:....:............x........ 25M2D12M9D93M9D10M6D144M3I367M2D12M1D86M3D140M 618/889 69.5% 892/94230402 0.0% 35/889 3.9% -6022376 -88208026 +3700 chr4 + 190214555 2701852 2701851 2701930 79 CCACAACCTCCGCTTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .:...:..:xx:x:.:.:.........:.x...x.xx.x........:............:.:....--.:........ 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -15495274 -78735128 +3378 chr4 + 190214555 2707837 2707836 2707900 64 CTCCTGGGTTCAAGCAGTTCTCATGCCCCACCCTCCCGAGTAGCTGGAATTACAGGTGCCGCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:...........::x...x..x.x.:..x...::.:...........:....x....xx... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -15489302 -78741100 +7592 chr4 + 190214555 2716006 2716005 2716140 135 TCTCTTTTGTTTTACAGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTAAA----TGTGGAGGCTGTGTCTGAAACCGTGGTGACT chr4 - 94230402 8725589 8725588 8725727 85504676 85504675 85504814 139 TCCTTTTCCCTTTGTAGATGATGTTTTTCTACCCAAAGACATTGATCTAGACAGTGTGGAAATGGATGAAACAGAGCGAGAAGTGGAGTATTTTAAAAGGTAAAGTGCTGTAATTCCTGCATGTAAAGCTGTTGTGGTT ..::...:x:...::.........:........:.....:.....:..............x........:......x.:........:.....:..........----...::xxx...::.x.:..:.:..x...::. 104M4I31M 104/135 77.0% 139/94230402 0.0% 4/135 3.0% -6009583 -88220819 +31876 chr4 + 190214555 2731753 2731752 2732611 859 GTTTGGCTTT-----TTGTCTTTGCAGGTTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCCCTGGAGAGGGA--CACGCGAGAGGCAGGCCAGGCTGCACCACCCCAA--------------GAGCCACGCCCCTCGCTGGC---GCCCCAGAGCCGTGGTGCTTG---CCAAGGGCTGTGCGGAGCTGG---------TGCTGCCTGA-AACCC---CAGACCGAGAAGTTGATGCTCGGCCCACG---CCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGAT-TGGAACAGTAGTTCCCG-CCAAGTCCTCCC-ACCACCGCGGCCTCGGAG----------------GCCTGGGCCGTGGCCAGA-TAGGAGTTTGCATCATCCAC-GTGGCTCC-GTTGCCTCTGCATTGCGCCCTGTCCTGTCAT---GTGTCCTCACCGGGGTATCGGCC--GTCACTCA-GCTCTCCTGTGCCCC----TGCGTCTCAC----CCT-------AGGCGGGCTGGGCGGGGCAGGC--CTCCTTTGTTCTC-CACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGA------TCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTCACACCATCAAGTCTGTTATAGAGTGTACGACTGTATTAACACGGAGGCCTGCCTGGCTACTTTTTTAACATATTGTTAAGTAATATTAAAATCATGTCTTTCTTTTTGAAAGATGGAATACATTAGTACAGCAGGAGACCTCGG--CTGCTTCTTTCTGCT--GGGGGAGTGGGGGGA chr4 - 94230402 8728014 8728013 8728963 85501440 85501439 85502389 950 GTTTCACTTTATCACTTTTTTTTTCAGATTCTGCTTGGATTCTGCCAGACAGACAAGGCAGAGACTGTCCATCAACTGGTCCAATTTTAGCTTGAAAAAAACCACCTTTGCTGCACATTGAAATGACACGATATGGGGAGGGAATCCTGCAGGAATCAATGAACG----ACAACTCCACTTACCTGTCCTGCTGTGCTGAGAGCTTATCTGGTCTTGAGCCAGTGCTGCCTTGCCTTGTCCCCAGTGCTGTGTGGATCTGCACTGAACCCTTTGGCCTGATAATTCTTGCGGACTGAAAAATTGCCACTTTCTACCTGAATTTGTTAGCTTGTGTGCTTGTAGTCTGTGAGTGAGACTTACTTGATTGTAGCTGTATGCCGTTGGAGATGAAACAATAGCTCTTTTCCATCTCCTTCTGAATGCCTTGGCCTCAAAGACTTTAAATTGCTTAGGCTTGGGTGGAGGCCAAAATACTAGTTTGCATCATCTGCAGTGGCTCCTGTCACTTCTGCATCTAGCTATGTTTTGTCATTCTGACTCCTGACAAAGGAATGGACCTAGTCAGTTGTGCTTTCATCTGCTCCAAAATTCTCCTGACATGACTTCATGAAAAAGAGGCTCTTACGGGACAAGTATTTCCTCAGTTCTTTCACAATCTACTGTTTAAGAGTGTACAAGTTACGCTATTTGTGTTTTGATTTTTTTTTCCTGACTTGTAGCCAGCTTGTGTAAGAATACTTGCAGAATGAGAAAATTTAAAAAAAGAACA----GTACTCACACTATCAAATCTGTTATAGAGTGTATAATTGTATTAACACTGAAGCCTAACTGGCTACTTTTTTAACATATTGTTAAGTAATATTAAAATCATGTCTTTCTTTTTGAAAGATGGAATACATTAGTATGGCAGAAGACCTGTGTCTTGCTTTTTTCTACTTGGGTGGGGTGAGGGAA ....x:....-----..x.:...x...:.................:........xx.:..:........:..............................:.............x..:....xx::x..xx:x...:......--.x:..::..:x..:xxx.x.----..x..:...x--------------.x..::x.xx.:.xx....:---.xx....x..:.:xx...:.x---..x..x......:...x...x---------.x:x......-..::.---.:...:..:..:...x::..:xx:x.x:.---::.......:......x...........x........:x:.:..........x.:...:..:...x-..:....:...:..::x-...xx....:.:-.x::..x:......::..----------------..:....:x.x.....:.-..xx.............::.-........-..::.:.......:xx..:x...::......---.xx....x..x::..x..x.:..--....x.::-...:..x.x...:..----.x.x:..x..----.:.-------.:.x..x::xx:....:..:.:--:....:x.....:-.............:.xx.........x...:....:.........x:------.:::...........................x:x.........:......:..x....x...xx..----..........:.....:................::.:...........x..:....:x............................................................................::....:......xx.--:.....:.....:..--..x..:...:...:. 10M5I128M2I20M4D10M14I20M3I21M3I21M9I10M1I5M3I29M3I66M1I17M1I12M1I18M16I18M1I20M1I8M1I31M3I23M2I8M1I15M4I10M4I3M7I22M2I13M1I47M6I66M4D150M2I15M2I15M 642/851 75.4% 950/94230402 0.0% 107/851 12.6% -5996261 -88234141 +3388 chr4 + 190214555 2735014 2735013 2735091 78 TACGTGTGTATATATATACACACACATATATATACACACACACATATATATACACACACACAGAGAGAGACAGATGGA chr4 - 94230402 47095165 47095164 47095241 47135162 47135161 47135238 77 TGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACAGC-AAAGACAGTTGGA .::.:....:.:.:..:.....:....:..:...x..xx.:x...:.:...:..:.:......x-.:......x.... 64M1D13M 54/77 70.1% 77/94230402 0.0% 1/77 1.3% -44360151 -49870251 +8235 chr4 + 190214555 2744695 2744694 2744950 256 ACCTGCTGTTCCAGCATCTGCACCCGCTCCAACGCAGCATCCCGGGCCGTCCTGGAGGCCGCCAGCTCCTGCTTCACTTCGGCACAGTCATTTATTTTCTCTTCCAACTGTCTGTTGAGCCGGGAGATCTCCTTCCTCATCAGCTCGG-----GCTCGTG----GGGGAT------------------------CTGCAGCCCCCTGAGCTGCGCATGGAGCCCCCTCACGTATTCGTCCCTGCTGGCGTTGTAGCGCTGCCACTTGGCATTGAGGTCTTCAACCTGAA chr4 - 94230402 8770522 8770521 8770810 85459593 85459592 85459881 289 ACCTGTTGCTCCAGCATTTGTATGCGCTCACTGTCTCCTTCTCTCGCCTTCTTCACATCTTCCAATTCTCTCCTTGATTTTTTGCACTCATTCATTTTTTCTTCCAGTAGCTTGTTTAGCCGGAGTATCTCCTTTTGCATCAGCTCAGAATTGGTTTGTGCTGAAGGTATGCTGTGCTGCTGCTCCAGCTTTGACTTCAGCTCTTTCAGCTGCAAGTGGAGTCGCTTCACATACTCATCTCTACTAGCATCGTACTTCTGCCATTTTGCATTTAAGTCTTCCACCTGAA .....:..:........:..:.:x.....xxxxx.xx.x..:.xx...x..:.x:x:x.:x...::..::x.:.::x..:xx::..x.....:.....:.......::x.::....x......::x........::x.........:.-----.:.:...----:..x..------------------------..x....:.::.x......:x:.....:.x.:....:..:..:..:..:..:..:.:...x:x......:..x.....x.:......x....... 148M5I7M4I6M24I95M 169/256 66.0% 289/94230402 0.0% 33/256 12.9% -6025827 -88204575 +10180 chr4 + 190214555 2747653 2747652 2747956 304 ACCTGGTCA---GGACTTCTCTCCCCCACATTCCTTTGTGCATGCTGTCGTTCATCCAGACACTTGGCCAGATGCTGACACATGTGGGCGGTGGCGGTCAGCGTCCTCCGCAGCTGATGGGTCTCGTTGGCCAAGGAGCGGCACAGGACGTCACTGGCGGCCCGGGCGCGCTCCCCTTCTGCCATGCTCCTCCGTAGCAGGACGACTTCCTTCTCTCGCTCGTGTTGGGGCTGGCTCAGCAGCTGCTGCATCTCCCTCTCTTTTTCTTCTAGTCGCTCAGTCAGCCTCTCAATTTCCTAAGTGGAAG chr4 - 94230402 8773270 8773269 8773564 85456839 85456838 85457133 295 ATCTGGTCATCCGAATTCCCCTTCTCT---TTTCTTTGCTT---------CTCTTCTAAACACTTTGCCAGATGTTGACACATTTCTGCTGTGGATGCTAATTTGCGCTGAAGTTGGTGAGTTTCATCAGTGAGTGACCGGCACAGGACATCACTGGTGGCCTGAGCCTTCTCTCGCTCTGCCAAGCTCTTCTGAAGCCTTAAGATTTCTCTCTCCTTTTCATATGGAGGCTGATTTATCATCTTCTCTATCTCTGTGTTTTTCTCCTCTAGCTGCTGATTCAACTTCTGCACTTCCTAAACATAAG .:.......---.:.:.:.:..:.:.:---..:.....:x:---------:..x..:.:......x........:........x.xx..x....xx.::.::x.x.x.:.x..:..:..:..:..:.::.:x.:x..x...........:.......:....:.:..x:x...:.x:.......x....:..:.x...xxx.x..:...::....::x:..:.:.x.:.....::.:.x..x..x..x:.....:x.x.:...:..:.....::...x.x...:.:...xx.:.......:::x... 9M3I15M3D11M9D257M 191/292 65.4% 295/94230402 0.0% 15/292 5.1% -6025617 -88204785 +3096 chr4 + 190214555 2777070 2777069 2777151 82 TCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCCCCATC chr4 - 94230402 528371 528370 528441 93701962 93701961 93702032 71 TCTTTTTTCTTTTGCTCTTTCTGTTTTTTTTTTGAGCTGTCCTTTTGCTATG-----------GGGCTGCTCCGGCCCCGTC .............x..:.....x.............x:.xxx.:.....x..-----------..:x...xx:......:.. 52M11D19M 55/71 77.5% 71/94230402 0.0% 11/71 15.5% 2248699 NA +3918 chr4 + 190214555 2781351 2781350 2781441 91 TTGGTCAAACCCAATGGGAAAAAGACTGA-----AACAACA-------ACAAAAACAGAAACAAACAAAGAACAACAACAACAAAAAACAGTTAAACAAAACA chr4 - 94230402 50013497 50013496 50013599 44216804 44216803 44216906 103 TTGATAAGCCCCTTTTGTGAACAGACTGATCTAAAACAACACACACCAACAAGTACAGAAAGAAAGAAACAACAACAACAACAAAAAACAACTAACCAAAATA ...:.x.:x...xx.x.x:..x.......-----.......-------....:x.......x...x...x....................::...x.....:. 29M5I7M7I55M 72/91 79.1% 103/94230402 0.0% 12/91 13.2% -47232146 -46998256 +3428 chr4 + 190214555 2781383 2781382 2781446 64 AACAACAAAAACAGAAACAAACAAAGAACAACAACAACAAAAAACAGTTAAACAAAACAAATGA chr4 - 94230402 8722682 8722681 8722745 85507658 85507657 85507721 64 AAAAAGAAGAGAAGAAATTAACCAACAACAACAACAACAAAAAACAGTTGAACCACATAAAGGA ..x..x..:.:x.....:x...x..x.......................:...x.x.:...x.. 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% -5941299 -88289103 +3401 chr4 + 190214555 2792973 2792972 2793181 209 GCCGGGGAGGGGC--GGGGCC--GGGGCGGGGCCAGGAGGAGGGCGGACTGGGCGGGCGCGGGCGGGACGGAGCTGCGGCGGCGGCGGGTCCCGCGGGCGGGAGCGCCTGGCGGCCGAGTCAAGCCGCCGCCTCGACCCAGGGCCCGCGGGCC---AGGAGAGCGCTCGGCGGGTAAGCCTCGGCGGCGGGTCTCGGCGGGTCTCGGGGGTCTCGC chr4 - 94230402 92567346 92567345 92567536 1662867 1662866 1663057 191 GCCGGAGGCGGGCCCAAGGCCCAGGGGCGGGCCGCGGCGCAAGGCGTGCTGGTCGGGGCTGAGCGCGGCGGAGCTGCGGCGATGGC---TCCGAAGGGAAAAGGC----GGCGGCAAGG--------------CGGGCAAGGGTGAGCGGGGCCGGGGGAGGGAGGCCTGCAAAGCAGCC-CGGGTGCCGGTACCGGCG---CTCACAGGCCTGGC .....:.:x....--::....--........x.xx..x.x.:....x:....x....xx:.:...x.:.............::...---...x:x...x::::..----......x::.--------------..:x.x....:xx.....x.---:....:.x.x:.x..:::xx....-...xx..x...x:.....---...:x:..:..x.. 13M2I6M2I63M3D16M4D10M14D20M3I24M1D18M3D14M 123/184 66.8% 191/94230402 0.0% 32/184 17.4% -89774373 -4456029 +3299 chr4 + 190214555 2802394 2802393 2802473 80 AAAAAAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATGTGTGTGTATATATGTGTAT chr4 - 94230402 39267128 39267127 39267207 54963196 54963195 54963275 80 AAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATAT ...:...x.xx.x:..:.:x:.......:..x.:.:::...xx.......:........x.....::.x.:....x:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -36464734 -57765668 +3209 chr4 + 190214555 2802526 2802525 2802606 81 ATATGTATGTGTGTGTGTGTATATATATGTGTATATATGTATATATGTGTATATGTATATATATGTTTGTATATATGTGTA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x....:.::...x:x...:..:.:x..:.:...:....x....:::...:x....::. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -78598767 -15631635 +3766 chr4 + 190214555 2802626 2802625 2802766 141 ATGTATGTGGTGTGTGTATATATATATGTATATGT--------GTGTGTGTGTGTGTATATATATATGTATATATGTATGTATG--TATATCTATATACACACACACACGTA-ACGTTAGGGAAAAAGGATCACAGCGAATGCATTAAGGCA chr4 - 94230402 8395745 8395744 8395894 85834509 85834508 85834658 150 ATTCAAGTGGAATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA--AACTACATTCTGGCA ..x:.x....x:.x....:...:.x.x.x.x..x:--------:.......:.....::...x.:......x..::........--..:..:x...:............::.-..::x.:x...x..::.x.x..--:.x.:....xx.... 35M8I41M2I26M1I22M2D15M 95/139 68.3% 150/94230402 0.0% 13/139 9.4% -5593119 -88637283 +3186 chr4 + 190214555 2802642 2802641 2802724 83 TATATATATATGTATATGTGTGTGTGTGTGTGTATATATATATGTATATATGTATGTATGTATATCTATATACACACACACAC chr4 - 94230402 35554958 35554957 35555040 58675363 58675362 58675445 83 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAAC ..x......x..x:.:......::::.:..x..:..........:...:.x:x....:.:x.x...:.x:.x..x.:...x.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -32752316 -61478086 +7734 chr4 + 190214555 2820598 2820597 2820761 164 TTGTCCTTTATTGCAGCTTCATGGCGGCTGAAGAGATGCATTGGCCTGTCCCTATGAAGGCCATTGGTGCCCAGAACCTGCTAACCATGCCTGGGGGCGTGGCCAAGGCTGGCTACCTGCACAAGAAGGGCGGTACCCAGCTGCAGCTGCTGAAATGTGAGTCC chr4 - 94230402 8846515 8846514 8846678 85383725 85383724 85383888 164 TTATTCTAAATTGCAGGAAGATGGCCTCAGAGGAGCAGGTCTGGCCGGTCCCAATGAAGGCAATTGGAGCACAAAACCTTTTGACCATGCCTGGAGGAGTGACCAAATCGGGCTATCTTCATAAAAAGGGAGGCACTCAGCTGCAGATCTTGAAGTGTAAGTTC ..:.:..xx.......xxxx.....xx.x..:...xx.xx:.....x.....x........x.....x..x..:.....x:.:...........:..x...:....:x.x.....:..x..:..:.....x..:..:.........x.x:....:...:...:. 164M 119/164 72.6% 164/94230402 0.0% 0/164 0.0% -6025917 -88204485 +6257 chr4 + 190214555 2822932 2822931 2823046 115 CAGGGCCCCTGCGCTTTGTCATCATCCACAAACGCTGCGTCTACTACTTCAAGAGTAGCACCTCTGCCTCCCCGCAGGGCGCCTTCTCCCTGAGTGGCTATAACCGGTAAGTGCC chr4 - 94230402 8847660 8847659 8847774 85382629 85382628 85382743 115 CAGGGCCACTGAGATTTGTTATTATCCATGAGGGATGCATTTACTACTTTAAGACCAGCACATCTGCATCTCCACAGGGAGCATTTTCTTTGAATGGTTACAATAGGTGAGTGCC .......x...x.x.....:..:.....::.:x.x...:.:........:....x:.....x.....x..:..:.....x..x..:..::...:...:..:..:x...:...... 115M 85/115 73.9% 115/94230402 0.0% 0/115 0.0% -6024728 -88205674 +7129 chr4 + 190214555 2824608 2824607 2824732 125 CCCAGGGTGATGCGGGCGGCTGAGGAGACCACGTCCAACAACGTTTTCCCCTTCAAGATCATCCATATCAGCAAGAAGCACCGCACGTGGTTCTTCTCGGCCTCCTCCGAGGAGGAGCGCAAGGT chr4 - 94230402 8848694 8848693 8848818 85381585 85381584 85381709 125 CCCAGGGTTATGCGGGCAGCTGAAGAGACGACATCAAGCAATGTGTTTCCTTTCAAGTTAGTTCACATTAGCAAGAAGCACAGGACGTGGTTTTTTTCTGCTTCTTCTGAAGATGAAAGAAAGGT ........x........:.....:.....x..:..x.:...:..x..:..:......x.x:.:..:..:............x.x........:..:..x..:..:..:..:..x..:x.x..... 125M 95/125 76.0% 125/94230402 0.0% 0/125 0.0% -6024086 -88206316 +5404 chr4 + 190214555 2831532 2831531 2831684 153 CAGTGAAATGGTCCTGCCTTCCTCTCCCTGCCCCT-CCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTGAAAAGCCCCGGCAACCCTCACAGGCTGACACTGGCGGG-GACGACTCGGACGAGGACTATGAGAAGGCAAG chr4 - 94230402 8853978 8853977 8854131 85376272 85376271 85376425 154 CAGTGGAGATGTTCTTCAGTTTTTGTTCTGTTTCTGCCAGGAGATCACCACCAGATGGGCAGAGTTTTAGAAGCTTCTCATTTGAAAAACCAGCACTGCCCTC-CAAGCCAAATCAAGTAAACGATGATTCTGATGACGACTATGAAAAAGTAAG .....:.:xx..:..x.xx.::.:x::...:::..-.....x.......x..x..............:..:........x........:..xxx:.x:.....-..:..::.xx.x:.::::-..:..:..x..:..x........:..:.:... 35M1I67M1D18M1I32M 103/152 67.8% 154/94230402 0.0% 3/152 2.0% -6022446 -88207956 +5763 chr4 + 190214555 2832309 2832308 2832415 107 TAATATGACTGTCTTATTTTAGGTTGTTCAAGGCTACAAGCCCCCGGGGAGAGCCCCAGGATGGACTCTACTGCATCCGGAACTCCTCTACCAAGTCGGGGAAGGTA chr4 - 94230402 8855704 8855703 8855810 85374593 85374592 85374699 107 TATTGTAATGTTTTTATTTTAGGATATTTAAAGCTACAAGCCCAAAGGGACAGCCACAGAATGGATTATACTGCATTAGGAACTCATCTACTAAGGCTGGAAAGGTA ..x.:.:.:xx.:..........x.:..:..:...........xx:....x....x...:.....:.x........:x.......x.....:...x.x..:...... 107M 81/107 75.7% 107/94230402 0.0% 0/107 0.0% -6023395 -88207007 +6802 chr4 + 190214555 2833681 2833680 2833837 157 TTCTCTTCCCCCACAGGACTCTAAGTTCTACCTGGAGGGCGAGGTCCTGTTTGTGAGTGTGGGCAGCATGGTGGAGCACTACCACACCCACGTGCTGCCCAGCCACCAGAGCCTGCTGCTGCGGCACCCCTACGGCTACACTGGGCCTAGGTGATGG chr4 - 94230402 8856626 8856625 8856782 85373621 85373620 85373777 157 TTCTGTTCTACCACAGGATTGTAAATTCTACCTGGACGCAGACATCATGTTTCTGAACATGGGGAGTTTGGTTGAATACTATAGCACTCACGTCCTACCTAGTCATGGCAGCCTGATTCTTCGGTGTCCTTATGGTTACTCTAAACCAAGGTGACAG ....x...:x........:.x...:...........x.xx..x:..x.....x...:::....x..:x....x..::....:x:...:.....x..:..:..:..:x:x......x.x..x...:::..:..:..:...x..:::..x......::. 157M 107/157 68.2% 157/94230402 0.0% 0/157 0.0% -6022945 -88207457 +3495 chr4 + 190214555 2841453 2841452 2841542 90 TGGCGCCATCTTGGCTCATTGCAACCTCCATCTCCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ....::...x..------:.:..:..:xx.x..:...........::x...x::x.x........::::...........:....x.... 12M6D72M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% -15355661 -78874741 +3918 chr4 + 190214555 2843945 2843944 2844140 196 GGAGCCGGAGCCGGAGCCGACGGGCG-GTGGCCGCACT-GGGACCCCGGAA----TCCCGCGCGCTGCCCACGATT-CGCTTCTGAGGTGAG--GCTAGCTAGCGGGGGCGGCGGGG---------------GCCCGGTTCGGGCTGAGGCGGCGGCGGGGGCGCGGGGAACTGGGCCGCGGTTGCGGCGGGCGGGGGCCGCGGGGCCTGCGGCGGCCCG chr4 - 94230402 90971948 90971947 90972165 3258238 3258237 3258455 218 GGAGGCGTGGCC--AggcggcgggcgcggggccgcgcTCGGTACTTAGGGAGCGCTCCGGAGCGGGGCCCGCGGTCGCGGCTCGCAGGTGAGTGAGGGGCGTGTGGAGGGGGCCGGGCTGCTGTGTGTTTCAGCCCCGCTCGGGCGGGGGCCTCGGAGGGGCCGGGGGCGGCAGGGCCTCGGACGGGGCTGGGGGGCTCCGTGCGGCTGGGCGCCCCCCG ....x..x:...--..x..:......-.x......:..-..x..::x..:.----...x.x...xx....:..:.:-..x:..xx.......--:xx:..xx.:..:..x...x...---------------....x.:......x.:...xx...x....x..x...x::.x.....x...x:.x...x..x...xx...:.x...:x.xx..xx.... 12M2D12M1I11M1I12M4I21M1I15M2I23M15I88M 132/194 68.0% 218/94230402 0.0% 26/194 13.4% -88128003 -6102399 +4660 chr4 + 190214555 2852156 2852155 2852429 274 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTT------TTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTGAAAGAGAGTCTCGCTCTTTCGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGC chr4 - 94230402 34857649 34857648 34857903 59372500 59372499 59372754 255 TTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCC-----CCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCTCCCGGTTTCG----GGCCGGCG--CTGCGATGCG------------TCCATCCTCCGCCGAC--GGTTCGGGC ..:..:..:.:x..xxx.:.x:.:..:x..x......:..x.:x..x:........:x..x...x..:..:.x.:x:.x:....::.:..x:.x...:......:..:-----...:x.::..:..x..x:.x..x..x.:...:.....x..x..------....xx.x:.....:...:.x..x:..::::.:.x.xx.xxx....x.xx.....----...:..x.--.x.:.:....------------.x..x........xx.--.....::.. 108M5D43M6I55M4D8M2D10M12D16M2D9M 158/249 63.5% 255/94230402 0.0% 31/249 12.4% -32005493 -62224909 +3330 chr4 + 190214555 2852205 2852204 2852352 148 TTCCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTGAAAGAGA chr4 - 94230402 28866445 28866444 28866574 65363829 65363828 65363958 130 TTCTGTTCTGTTGGCTGCTTCCTATCATTTTTTCGTCTCTTCCTCAGT-----------TCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTC-------ACCTTGATGTTTTTCATTTCTTAGAGGAAA ...:x...:x..xx:.x...:..x..x...:..:x.:....:...xx.-----------.....:..x:x..:.:.......:..x:........xx.x.:...:.:....-------x:...xx.x.....:x...:..::.:..:. 48M11D52M7D30M 85/130 65.4% 130/94230402 0.0% 18/130 13.8% -26014240 -68216162 +3143 chr4 + 190214555 2852232 2852231 2852311 80 TTTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTT chr4 - 94230402 40845018 40845017 40845097 53385306 53385305 53385385 80 TTTCTTTTGTTGTTTTTTTTCCCCCCTCACCTTTCTCTAGCACAGCCAGTTTTTCTTATCTTTTTCTTTCTTTTCTTTCT .......:x..x...:.:..:.:::..:x....:..::xx:x.xx..xx:.......x......::............:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -37992786 -56237616 +3110 chr4 + 190214555 2852263 2852262 2852348 86 TTCCTTCCTTCCTTCCTTCTTTTCTTTTC---TTTTCTTTTCTTTTCTTT-----TTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTGAAA chr4 - 94230402 51354245 51354244 51354338 42876065 42876064 42876158 94 TTCCTTTCATCATTCTTCCCTCTCTCATCAGATTTTTTTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGA ......:.x..x...:.:.:.:...:x..---....:.....xx....x:-----.....:x..x:.x..x..........:........x.:. 29M3I18M5I39M 63/86 73.3% 94/94230402 0.0% 8/86 9.3% -48501982 -45728420 +3033 chr4 + 190214555 2861839 2861838 2861895 57 CAAACTTGTCCAACCTGTTGCCCACATGTGGCCCAGGACAGCTTTGAATGCAGCCTA chr4 - 94230402 53534114 53534113 53534170 40696233 40696232 40696289 57 CAGGCATGTCCAACCCATGGGCCACATGTGGCCTGGCACAGCTCACAGTGCAGCCCA ..::.x.........::.x.x............::.x......:xx.:.......:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -50672275 -43558127 +15195 chr4 + 190214555 2875877 2875876 2876121 245 TTTTATTTTGATTCTGTAGGAACCTAGAAAGATTGTACAATGAATGGTGATTCTCGTGCTGCGGTGGTGACCTCACCACCCCCGACCACAGCCCCTCACAAGGAGAGGTACTTCGACCGAGTAGATGAGAACAACCCAGAGTACTTGAGGGAGAGGAACATGGCACCAGACCTTCGCCAGGACTTCAACATGATGGAGCAAAAGAAGAGGGTGTCCATGATTCTGCAAAGCCCTGTGAGAAGAGA chr4 - 94230402 8894081 8894080 8894323 85336080 85336079 85336322 243 TCTTCTTTGTCCTCTGCAGGTTCC--ATAAAGCCGTACTATGAATGGTGATTCTGGCGTGGCGGTGGTGACCTCGCCACCTCCAACAACAGCCCCTCATAAAGAGAGGTATTTTGATCGAGTTGATGAGAATAATCCAGATTACTTGAGAGAGAGGAATATGGCACCTGACCTTCGCCAGGATTTTAACATGATGGAACAGAAGAAGAGAGTCTCCATGATTCTTCAAAGCCCAGTAAGACAAGA .:..x...xxx:....:...xx..--:x..::::....x...............x.:.:x..............:.....:..:..x...........:..:........:..:..:.....x........:..:.....x........:........:........x..............:..:...........:..:........:..x...........x........x..:...x:... 24M2D219M 196/243 80.7% 243/94230402 0.0% 2/243 0.8% -6018204 -88212198 +13477 chr4 + 190214555 2881891 2881890 2882066 176 TTATTAGGCTTTCTGTGAAGAATTGGAATCAATGATACAGGAGCAATTTAAGAAGGGGAAGAACCCCACAGGCCTATTGGCATTACAGCAGATTGCAGATTTTATGACCACGAATGTACCAAATGTCTACCCAGCAGCTCCGCAAGGAGGGATGGCTGCCTTAAACATGAGTGAGT chr4 - 94230402 8895437 8895436 8895612 85334791 85334790 85334966 176 TTGGCAGGCTTTTTGTGAAGAATTGGAGTCTATGATCCAGGAACAATTTAAGAAGGGGAAGAATCCAACAGGTTTATTGGCTTTACAGCAGATTGCAGATTTTATGACAACAAATGTGCCAAATGTCTACCCAGCAGCACCACAAGGAGGAATGGCTGCGTTAAACATGAGTGAGT ..:x:.......:..............:..x.....x.....:....................:..x.....::.......x..........................x..:.....:....................x..:........:........x................ 176M 156/176 88.6% 176/94230402 0.0% 0/176 0.0% -6013546 -88216856 +13256 chr4 + 190214555 2884489 2884488 2884695 207 CTGAGTTTTGTTTTTCTTTATT-TCAGGTCTTGGTATGGTGACTCCTGTGAACGATCTTAGAGGATCTGATTCTATTGCGTATGACAAAGGAGAGAAGTTATTACGGTGTAAATTGGCAGCGTTTTATAGACTAGCAGATCTCTTTGGGTGGTCTCAGCTTATCTACAATCATATCACAGTGAGTATTAAATGGGCTAGTAACTGAAC chr4 - 94230402 8896671 8896670 8896878 85333525 85333524 85333732 208 CTGCCTTGTGCTTTCTTCTCTTCTCAGGCCTTGGCATGGTGACACCAGTGAATGATCTCAGGGGGTCTGATTCCATTGCTTATGAAAAAGGGGAGAAGTTATTACGATGTAAATTGGCGGCTTTCTACAGATTAGCAGATCTCTTTGGCTGGTCTCAGCTTATTTACAATCATATAACAGTGAGTATTGAATCAACAGAGAACTGAAC ...xx..x..:...::.:.x..-.....:.....:........x..x.....:.....:..:..:........:.....x.....x.....:..............:...........:..x..:..:...:................x..............:...........x............:...x::.x::x........ 22M1I185M 170/207 82.1% 208/94230402 0.0% 1/207 0.5% -6012182 -88218220 +7159 chr4 + 190214555 2894002 2894001 2894098 97 TTTCCCCACAGACCAGAGTGAACTCCGAGCAGGAACACTTCCTCATTGTCCCTTTTGGGCTTCTTTACAGTGAAGTGACTGCATCCAGTTTGGTAAG chr4 - 94230402 8900282 8900281 8900378 85330025 85330024 85330121 97 TTTATCCTTAGGCCAGAGTAAATTCTGAGCAGGAACACTTCCTCATTGTACCTTTTGGACTTCTTTACAGTGAAGTTACTGCCTCCAGTCTGGTAAG ...x:..x:..:.......:..:..:.......................x........:.................x.....x......:....... 97M 84/97 86.6% 97/94230402 0.0% 0/97 0.0% -6006280 -88224122 +10447 chr4 + 190214555 2894568 2894567 2894736 169 TTTTTTATTTTCAGGTTAAGATCAATCTACAAGGAGATATAGTAGATCGTGGAAGCACTAATCTGGGAGTGAATCAGGCCGGCTTCACCTTACACTCTGCAATTTATGCTGCACGCCCGGACGTGAAGTGCGTCGTGCACATTCACACCCCAGCAGGGGCTGCGGTGAG chr4 - 94230402 8901542 8901541 8901710 85328693 85328692 85328861 169 TTTTTTGTTTCTAGGTTAAAATCAATATTCAGGGAGATGTAGTTGACCGTGGGAGTACTAACCTGGGAGTAAACCAAGCTGGATTTACTTTGCACTCTGCAATTTATGCAGCTCGACCTGATGTTAAATGCATTGTTCATATTCATACTCCAGCAGGAGCAGCGGTAAG ......:...::.......:......x.x..:......:....x..:.....:..:.....:........:..:..:..:..x..:..:..:.................x..x..x..x..:..x..:...:.:..x..:.....:..:........:..x.....:.. 169M 132/169 78.1% 169/94230402 0.0% 0/169 0.0% -6006974 -88223428 +3596 chr4 + 190214555 2896284 2896283 2896357 74 CTGCAACCTCTGCCCCTCGGGTTCAAGCAGTTCTCTTGACTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x.::::.........::x...x.xx.:........::...........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -15300842 -78929560 +18627 chr4 + 190214555 2898182 2898181 2899447 1266 AGGTCTCTGCAATGAAATGTGGCCTCTTGCCAATCTCCCCGGAGGCGCTTTCCCTTGGAGAAGTGGCTTATCATGACTACCATGGCATTCTGGTTGATGAAGAGGAAAAAGTTTTGATTCAGAAAAATCTGGGGCCTAAAAGCAAGGTCAGTAGGCATCTAATCTGGTATTTAAATTACAGCAGAAA------GAAGAATAAAGCAAAGGACCAGTCT----TCCTGCCCAGCTCCACAGAGCATTCA-------TGCTT-------------------------------CCCCTCAGGTTCTTATTCTCCGGAACCATGGGCTCGTGTCAGTTGGAGAGAGCGTTGAGGAGGCCTTCTATTACATCCATAACCTTGTGGTTGCCTGTGAGATCCAGGTAGGGGACAGCCATTCCAGTCACTCTGCAGTTTATTTAGATGT---GTCTGGGGTTCACATAGATTTTTTTTTGATACTTATCGAGTAGGAGAGGAGTCTTTGAGCAATCTCTTTGCCAAAGATAAGCTCATGGATTTGGGACTTGATCAGGACAAATGCTGTTTCACTGATTGAAGTTGGCAAAGGATTACTGGGCTTTTCATTTCTAATTTTTAAATTTTCAAATATGTCAGTCACTACCATTTATGGAGTACTGGTGTGTATAGGCCTGGCATCAGGTGCTTAGTGTGTGTCATCGCATATGTGATGTCACGTGACCCCCACAGTACTCTTTGAAAAAGCAGGTATACAGAAGTAGAGACTCAGAGACTTGCCTGCAGCTTACAGCTGTGAGTTCCCCTCCGCTCCGTCAGCCGTTAGTTCACGTTCTCCCCTCTGCTTCTTGACTTATGTCTGTGGCGTAGTGAAGTCCCAAGTCCTTTGTAGGATCCTGAAAGGTGCTGTGTTTTCTCATTTCTCTGCCAACTTTGGTGCCCAATATTT--TTGTCATGCTAAAGAAATACTTCTGAAAGTAACTTTGTGATCAGTCTGTCACTATCCATTCTACATTTTTTATTCTTACACTCTAGAGATTTGGTTTCTTTTGAAACCTACATTTTTATTCAAGTCATCTGACCCTCTTGATCTCAGTAAGGAACTCAAGCCATGCTGTGTGTGTTTTGGAAAAGGTTCGAACTCTGGCCAGTGCAGGAGGACCAGACAACTTAGTCCTGCTGAATCCTGAGAAGTACAAAGCCAAGTCCCGTTCCCCAGGGTCTCCGGTAGGGGAAGGCACTGGATCGCCTCCCAAGTGGCAGATTGGTGAGCAGGAATTTGAAGCCCTCATGCGGATGCTCGATAATCTGGTAAGAATGGTG chr4 - 94230402 8901940 8901939 8902869 85327534 85327533 85328463 930 AGGTTTCTGCAATGAAGTGTGGCCTGTTGCCGATTTCCCCTGAAGCCCTTTCTCTAGGGGAAGTAGCTTATCATGACTACCATGGTATCTTAGTGGATGATGAAGAAAAGGTGGTTATTCAGAAAAACTTGGGACCTAAAAGCAAGGTCAGTTG---------------------TTACAGCTGAAATTAAATGAAGTGTGTGGGGGAAGGGAAGTATGTTATTTAATCAGGATCCATATATAATTCACTGTAAATACTTGCATCATTTTTGTTAATCTTCTTTGCAATGACTCTCTAGGTCCTTATTCTAAGAAACCACGGCTTAGTATCAGTTGGAGAGACTGTTGAGGAGGCTTTCTACTATATTCATAACCTAGTGCTTGCCTGTGAGATTCAAGTAAGA-------ATTTTAAT---------GTTTATTTAATACTACAGTCTG---------------CTATTTTGACCTTCA------AACAGATGAATAGTTGTGCATTTTACTGGT------TAAGCTA-------------TTGATTTGAACGAACG------------------------------------------------TAATT-------------ATCTGTCAA-----ATCATT------ATACT--------------------------------------------ATATGCAA---------ACATCCAAAGCACTGATTCTACCAGCAG---TATCCAAATACTGAGTTAGAACCACTGCTATGG--------TATGAATCCTTCT-----------------------------------------------------------------AAG-----AGTGTTTTGTAGAACCTTAAAG--------------------------CAACTTTTGT-----ATAGTTGATTGGTTTACCTTTAAAATG-------AAGTAGATTT---------------------CTTCTGGTTTGTTGATTTTTACTT-------GTTTGTTTTTTT--------------------------------CCCTCTT----CCCTTAAGAAACTAATA----GTTGATTGTATTGTTTTTAAGGTACGTACTCTGGCCAGTGCAGGTGGACCAGACAATTTAGTACTATTAGATCCTGGAAAGTACAAAGCCAAGTCTCGTTCCTCTGAGTCTCCATCAGGTGATGGTTCTGTATCCCATCCAAAATGGCAGATTGGCGAACAGGAGTTTGAAGCTCTTATGCGAATGCTCGATAATCTGGTAAGGGAGATG ....:...........:........x.....:..:.....x..:..x.....:..x..:.....:....................:..::.:..x.....x..:.....:..xx.x...........::....:..................x.---------------------.......x....------....x:.:x:.x::.:.:xx...x.----.::x::.x:.x....:.x.xx.....-------.:...-------------------------------.:.:::....:........xx.:.....:..x:.x..:.............x:...........:.....:..:..:........x...x.............:..:...:.:-------...::.:.---------.........:xxx.---.....---------------:.x......:x:.:.------.:x...x..:.xx...x...x.:.x:.x.:------......x-------------.....:x.:..:..:.------------------------------------------------.....-------------..x.....:-----.:....------:....--------------------------------------------.....::.---------..x:...x..:...xx..xx.xx.....---..:xx..:..xx..x.:...:x.x:xx..:::.--------.:...:.:.::..-----------------------------------------------------------------...-----...x:.......:.:.:.:..:--------------------------.......x..-----...x..--...x:x.:.:xxx:....:-------.....:x...---------------------x....:xx..x..x...:....x:-------:....x...:..--------------------------------.......----:.xx....:....x.x:----.:..xx...:..x.xxxx.....x..x.................x...........:.....x..::.::......::.................:......:.x.:......:x:...x..x..:x...x...x.x...x..:...........:..:.....:........:..:.....:....................::x.:.. 154M21D12M6I25M4I26M7I5M31I113M7D8M9D14M3I5M15D15M6D30M6D7M13D16M48D5M13D9M5D6M6D5M44D8M9D28M3D33M8D13M65D3M5D22M26D10M5D6M2I19M7D10M21D24M7D12M32D7M4D17M4D210M 642/877 73.2% 930/94230402 0.0% 442/877 50.4% -6003758 -88226644 +59635 chr4 + 190214555 2904740 2904739 2907419 2680 TCTTTCACTCTCCTTGGACCCTAGGGCTACAGAACTGGCTACCCTTATCGATACCCTGCTCTGAGAGAGAAGTCTAAAAAATACAGCGATGTGGAGGTTCCTGCTAGTGTCACAGGTTACTCCTTTGCTAGTGACGGTGATTCGGGCACTTGCTCCCCACTCAGACACAGTTTTCAGAAGCAGCAGCGGGAGAAGACAAGATGGCTGAACTCTGGCCGGGGCGACGAAGCTTCCGAGGAAGGGCAGAATGGAAGCAGTCCCAAGTCGAAGACTAAGGTGTGGACGAACATTACACACGATCACGTGAAACCCTTGCTGCAGTCTCTCTCGTCCGGTGTCTGCGTGCCAAGCTGTATTACCAACTGCTTGGTCTGTGCCTACCTTACTGTTCATAGTTAGATGACGTAGAGCAAGTT-GGGTAGCTGGGGCTTCGGAGGCTTTGGGAATCCAGCCTTTCTGACCCAGGTGTAAAGCGAACCTTCCTTATT------CACTTTCTTGTAGTCTGAACCTAAGT-------------CCACTGAAT---GCATTACTAAAATTCGG---ATAATACTATCT-----------GCTTGAAACTGCTTAAGATGTAATGTAAC------TCCGCAGTAGTTCCAGTATATCTCCGTATATAGCAAAAATATACAATAATTTACATGTATTAACCTACAAATAGGAGCTCTTCTTATTTAATTC----AAATTATATTCAGGGA-CTCTTAATACTTCATGCACAAAAAGACACTTCAGT-----------CCTAAACC----------TGTATTTTAG-------------------------TGTTGTGAACTCCAG--TGGTTT-CAAGTCACTAAAGTTTCTTAAGT--------------------------------CTTCAG-----TGTTTTCTTAAGCAGTTTTCCCTTGTGGCTCCCTGGCGTGTTCTCTGCTGACTCTTGTCCCCTGCCCTTAGTGTTATTCCCCTGCTTTCTATCCCAAAGCCTCCGAATGCACACCCCCAGCTGCCCTCTGCATGGACTGTTGCATGTGAGTAGACGGCCAT-AGTGGCGAGTC-ACCTTCTGACTCCTGTTGGGTGCGGCATGACCCAAGTGCAGCGCAGGCCATCTGCAGGCACCAG-CGACAGACGCTGCAAGGGGTGCTTCGTTTCA-GCGTTAATGCCGCTCA-AGTTATCGTTTGTCCTGAGAGGTGCTCCCAT---GTCGTGGTGCTGAGACCTCCTCTGAAGATGGGTCTTTATTCCTCCTGTAACCTACCTCTAACAGTCCACCCAGCTCTGCTTTAAACT-----GTATGTAGAAGAGGCCCATTTCCAGAAGCCCCTGGAATGGAGGAGACAGGGGCT------GAAGCAGACT-------CATCTG--TGCATGACT--------AGTTCATTAGGAGTTCAGTTGAAATTAGATTAGATGCTCCTA--------------AAACCATGGGCAACCAAATACAT-------AAAGTGGGGCTTTCTTTTCCCCTTGTAACAGTGTTTTACTTTATAGATTTATTTAAAGAAAAAAAGTTTTATCTT--CCCCAGGTGGTCCTGGTGTTTTCCTGACGCAGTTGGTGAGAAGCCTCCGTGCTCCTGAGCGGCCGCGTCACCTGGGCAGGGACCCTGTGTGGC------CATGGGGCTCTGAGCATGGGAGTGCGTCTCTCCTCTTCTTTCCTG---------CCCTCCTTGTCTTCTTTCCCCCCTTCTTCCTGTCTCCCCTTTTCTTTCATTTGTTTATTTTTTACTTGTTTCACTTGTTAAAGGAAGTGGGCGTTATAAAACAAAAAAAAAAAACCCCAAAACACCTTTCTGCGGCTGATGTGAAGCACAGTGCTGAA-TTGCCATGAGGAAGTTTTCCAAAGCGTTTAGGCA-------GCAGCGCGAGCTTTATTTACCATTAGCTTGCAAAACAACTAAGTCACTTTAGGCCTAGTAGTCAATGTGTACATCCAAGGGGAGGCCTTGCTCCGCATTTATATTTGTTTCTTACTGTTCTGGAGTGACAG---AGTCCATGCAGTGCTCCCAGGTTGGTATCTTTTCATTTA-TAATGATTGCTGTTACTTTTTCAAA------TGTGTTCAAGTTTCTGAGGTTGCTGTTTGAAATGCTTTGACTAAAAATTATTTTTAATAAAACGCTGGAGTTGTTTTTATCTGAGAAGATAACCATCAGTGAGTA-CCCAGAGCTCCATGCCCATTCCACACTCT-CCTCGCAGTGGCTCAGCATTTGCTGGTTTTGTTGCTTTTTTTAAAGTCGTATGGTTTATGGCTATCTTATTGCCTCTCGAAAGTATTCTG----AAAGGCATAACATTTGCTCTCGAAGATGGGCTTGTTTTAATGTTCAGTGCCTACTC-ATGCCTTAGAATTTGATTAAAAATC------TCAGATTTGATTGGAGATCCA------AAAAAAAATTATG-----GGTGGAAGGCTCAGCATGCTGACGAGATGCACTGAT--ACTAAAACAGCCTTTAAATATTAAGGACTCATGAAGCGCTTCAAGTT--TGTTTGGGATATTTTTGTAGCACTCAAAAATATTAAGTTATATAAAATATTCGACATCACCAAACTCTTCTTCCAGGTAGCTACCGTGTAAGTGTCCATACAGTAATG---TTCTTGGGTTGAA---AGTTACGCAGACAGTGCATTCTGATGCTGTCATTTACTTTAATGCAAAACTTTGGTGATGCCCACTCTTGCCTCACGGTGCAGGCTC-CTCCCTAACCCTGGGTAGCAGCATCACATTGCTTTTCATGACCCTGTCATCTCATGCTTCCAGTTGGCTTTGGTGTTGGATGATTTTCAGAGCAGTGAACCAATGGTCTCT chr4 - 94230402 8904630 8904629 8907342 85323061 85323060 85325773 2713 TCTGTCATTCTGCTC---CTTCAGGGTTACAGAACTGGCTATCCATACCGATGCCCTGCTCTGAGAGAGAAATCTAAAAAGTACAGCGATGTTGAGATTCCAGCTAGTGTCACAGGTTACTCCTTCACTAGCGATGGCGAATCAGGCACTTGCTCCCCCCTCAGACACAGTTTTCAGAAACAGCAGCGAGAGAAGACAAGGTGGCTGAACTCTGGCCGAGGGGATGATGCTTCTGAAGAAGGGCAGAATGGTGGCAGTCCCAAGTCGAAGACTAAGGTGTGGACGAACATTACACACGATCACGTGAAACCCTTGCTGCAGTCTCTCTCGTCCGGTGTCTGCGTGCCAAGCTGTATTACCAACTGCTTGGTCTGTGCCTACCTTACTGTTCATAGTTAGATGATGTAGAGCAACTTGGGGTGGCTGGCAC-TCGGAGGCTTTGGGAA--------------------GAGAAAGATAACTCTCCTAATTTTTCTCCTCTTTCTTACATAAAAAAACTAAATTGTGTTTTACTAACCACTTCATTGGGCTTTTCTTAGATCTGAGTTATAAAACCATATCCCTTCATAAGTCTTAAAACTGCTTAAAACTT--TGAAACATCTGATTTTCTTTTCTTCTGGCTTTTCAAGCTA-ATGGCCAA---ACAGATTGATTCATG-GTTTTGAT---TGAATATGTTCTGCATTTAAATAGTTTATGGACAACATAGTTAGGAAGCTACTTATTCTATCTGCATGAAA--GCTTTTCAATGAAAGCAAAAATGGAAACTAACTGTTCAGTGTGTTGTAGAAATAACAAAACAAATGCTACCCTCTGTTACATATACCAACTTAATTTGCAAGCCAGTGGAGGTCTGTAAGTATGTGTGAGAGGATAGAGTTGATTTCAAAGTACTTAAGCATTCTTTTTCTTTAAGCAGTTT-----------TTCTTGCAATGTTCT----TGAGCTTCCTTTTCTGTCCTGCTTACTATGCTTTTGTCTTC---CCCAAAGCCTCTGAGTGTTCACAACCAGCTGCCTTCTGCATGTAGTGTTGCATGTAAGTAGATGGCCATAAATGGAAAGTCTTTCCTCCAGTACCAGCTGGGTGCGGCATGACTAAAGTGCAGCTCAGGCCATCAGCAGGCACTAATCGATAGATTCTGCAACCGGTGCTTTTTTTTGTTTATCAATGCTGCTTACAGTTAAATCTTGCACTGAAAGATATGTTAATTAAGAAGCAAAACTATCAAATGCTTTCAA-ATGGA-CATCAGTACTGTTG------GTTTGTAACTGT------GGTTTTGTTATTTTCTTGGGCATATGCAG------------------GGCATCTAAAATGCAGG---CAGGGATTTGCACATGAGCAAGCTTTTGTAACAGCTGACTTCACAGCTAGTAAATGAGTTCTGTAGTGTTTCAGTAGCGA-TAGTATGTATGGTAGTAGGGTGATTACAGATAAGTTATGAAAGATAGAATTGGTGCTCTTGAAAAGGAAATATTTTTTTTTTTCTAAAACACCTCTTCCCT-------CTTATTTACCCCCTCAAAATTCAACTTTACCTCTAAATACAGTCAGAGTTCTCT-------GTCTTTGGAGTACTTCCATGC-ATTGAATGG-------ACCT---CAGGGAACGTATGCATTAAAACACACGGTGTTA-AAATACAGAAACA-----------------CCTGGAAAAAATACCATCAATG--------------ATCTCTCTGT----------------GGTATTTTTGTTTTGTTATTTTGGCTT-----AAAAAGTGAACCT--------ATAGAGTTTGTACC----ATCAACTTTTT---GTTAAACTTAGCCACAGTTTGGCCTTTACTGAAAGAAAACTTT--AAAGC---TAGGCACGCATTTGGAGCATGTTGTGTTTTTAACCTTAGCTCACGAAGTAGGCAG--TATTTTATGTTTGAAAATATCAGTGAA-----AGATTGAAGCAAAATTCAGAAGCTAGTCTTGTTTAATGATATGCTGAAGCAGTAGAAAAATTGATACATTA-TAACAGGTTTGTATGTTTGAATTTCTTAATGCTTGTTATTAACATAAGAAAAAATAGCTTGTTA----TATTGAGGTTGTTTCTATATTTGTTTTGACTAAAGATTATCTTTAATAAAAAGCTGGAGTAGTTTTTATCTGAGAAGATAATCATCAGTGAGTATTTCACAGCTCCATGTTCATTCCATTTTTTACTTTACAGTTGCAAAACATTTTAAAATTCTGTTGC--TTTTTGAAGTTTGACAGTTTCTGGCTATCTTATTATTTCTTGAAGTTATTAAGGAAAAAATGCATAGCATTTGCTCTATAAG-CAGGTTTGCTTTACTGTTGAGTGCATTTTCTATGCAATAG----TGATTGAAAATTAGGACACCACATGTAATAAACGTATCAAGTTGTAAAGTTAATTATGCAGCAAATTGAAGG--CAGC-TTCATACTAAATGCACTGATCAAATAAAGCAACC------TATGAAGAACCCATAAAGCGCTTACAGTTTGTGTTTGGGATATTTTTGTAACCTTTTAAGCTA-TAAGT--TATAAAATATTCGACATCACCAAACTGTTCCTCTAGGTTGCT---------GTGCTGATACAGCTACAGATTGTCTGTGCAGAAACTAATTCTGGAAACAGAACATTTCGCTGAAATAGTTGATTTTAATGCAAAACTTTGGTGATGCCCACTCTTGCTTCACAGTACAGAATCATTCACTAAACCTGGTTAGTGGCATCACATTGCTTTTCATACTTCTGTCATCTTATGCTTTAAGTTTGCTTTGATGTCTGTTGAGTATCAGAGGATTGAATCAATGATCTCT ...x...:...x..:---.:::....:..............:..x..:....:..................:........:...........x...:....x.......................::....:..:..:..x..:..............x....................:........:...........:.................:..x..:..x.....:..:..............x:......................................................................................................................................................:.........x..-....:.....x:.-................--------------------x:x....xx...::....x...------.x.......::.xxxx:..x....:.-------------.....xx..---..x..x..x.:..::.:---....x..:..x.-----------x...:...........:.:x.--..x...------.::x.xx.xx...::.:x.x..xxxx..-..:..x..---.:.x.x.:...:.::-..x..:.:---::....x.xx..x:x:...xx..:..:----.x.x:...x.:...:.-..x:.x..x..x:x....::...--:.x:....:.-----------:xx....:----------...:..x...-------------------------....:::x.:x...:--.::...-....:..x.::..x.::x.....--------------------------------...x..-----.x...::...........-----------.:.:..xx:......----...x::.:x.:::...:...xxx.::...x.:::..::...---...........:..:..:x...xx.........:........x.x..........:......:......-.:...x:....-x:.:..::::x..x.:...............:x.........x.........x........:.:-...:...:x......xx.......:x...::-x::.:.....:...:.-.....xxx:...:x....:..:.::x::x..---.xx.:::x:..:xx.xx.x..:.x..-....:-.x.:.x.x..x:..------:::.x....x..------:.:.:..:.x.xxx..-----:....:..------------------:..x:..::....x...---.....::.------x:....::..-------..x...--.x..:::..--------.....xx...x:x......x.x:.-...xx.:x...x.xx..--------------..:::...::x:.:x:...xx:.-------...:x.::::x..:....:::::.:x....x:x:..:x..-------:.......xxxxxxx...:..:x.::..--.:.:.::.:xxx:::.x...:..:-------..:xx..:::x:.:...:...-x:...::..-------....---......x.x.:..::x:------..:..x.:.x-:.::.::.:.:::-----------------....---------..x..xx..--------------x...::....----------------xx.:...x.x....::.xx...x:...-----.::.....::.x.--------.x.:.:xxx:x...----.x..x....:.---.:.:.xx.x.:x......x:x.xx-..:.::x:..:..::...--.....---......-------.x...::.xxx.x.x....x.x......::.:..::.:x:.:--:.:....x.::.::x.:.xxxx...x.-----.::xx..:..xxx::..x.x.x:..xx:......xx.:x.:.x...:..::::..---.:.:x..:..x.:-.xx......x....x...xx....x-.....x...:.:...x:x.xxx...------:x....x----.x:........:.x:.xx.xx..:..........:.....:..........x........x....................:............-::..x.........::.......:x:.:.-.:.::....x..xx.:.....xxx::..:......--.....:....:xx.::....x.............:::...:...:x....xx.----...x.....:..........xx...-::..:...:....x....x.....x.x:..-....xx...----.....:.....:------:..x..x.:..x::x.xx:..------...:xx.......-----::.x.....--....-.x.xx..x.:..........--.x....:..:..------...x...:..:...:........xx....--...................:.x:.:x..:x..-.....--..........................x...:..:....x...---------...::x......:x.::---.x::..x.:x...---.:..x:.x.:....x:....::.x..xx:.x:..x.:..................................:....:..:...:x..-:..x....x.....x...::...................:x::.........:......:x....x......:...:x.x...x.x......x.x....:.....:..... 15M3D398M1I13M1D16M20D22M6I26M13I9M3I17M3I12M11I21M2D6M6I28M1D8M3D15M1D8M3D27M4I16M1I23M2D10M11I8M10I10M25I15M2I6M1I23M32I6M5I18M11D15M4D41M3D69M1I11M1I64M1I31M1I16M1I31M3I26M1D5M1D14M6D12M6D16M5I8M18D17M3D8M6I10M7I6M2I9M8I24M1D17M14I23M7I40M7D28M2I24M7D21M1D9M7D4M3D17M6I10M1D13M17D4M9I9M14D10M16D27M5D13M8D14M4D11M3D24M1I18M2D5M3D6M7I42M2D27M5D55M3I13M1D25M1I25M6I7M4D94M1I29M1I35M2D53M4I25M1D30M1I9M4D12M6I21M6I13M5I9M2D4M1D20M2I12M6D29M2I32M1D5M2D42M9D17M3I13M3I87M1I111M 1731/2452 70.6% 2713/94230402 0.0% 489/2452 19.9% -5999890 -88230512 +13598 chr4 + 190214555 2907611 2907610 2907850 240 ATGTGGTCATTGGTTCAGTCCTCTCTGTGATGTTCAGTGCATGACCAGATGTGAGATAAACTGAATAGATTGGATGCTATGTCACTTATTGTTGTCAT------AATTCTGACTTTTCAACTGTTCTTGATATTACAGTGGACTAAAGAGGATGGACATAGAACTTCCACCTCTGCTGTCCCTAACCTGTTTGTTCCATTGAACACTAACCCAAAAGAGGTCCAGGAGATGAGGAACAAGGTGCGT chr4 - 94230402 8907872 8907871 8908104 85322299 85322298 85322531 233 ATGCAATCATTGGTTCAGT--TCTCTGTTATGTATAATGCATGATCAATTCTTATGTGAA---------TTTGCTGCTGTG--AGTGTCTGCAGCCATTACAGCAATTCTGACTATTCAACTGTTCTTGACGTTACAGTGGACTAAAGAGGATGGACATAGAACTGCCACCTCTGCTGTCCCTAACCTGTTTGTTCCATTGAACACTAATCCAAAGGAGGTCCAAGAAATGAGGAACAAGGTTTGT ...:::.............--.......x....x:.:.......:..:x.x.x.x:.:..---------..x.x....:..--.x.xx:..:x.:...------..........x...............::.................................x...........................................:.....:........:..:..............x:.. 19M2D39M9D12M2D15M6I142M 192/227 84.6% 233/94230402 0.0% 19/227 8.4% -6000261 -88230141 +15983 chr4 + 190214555 2908489 2908488 2909589 1101 TGTGTGCCTCTCCTTCCCACCCTCAGATCCGAGAGCAGAATTTACAGGACATTAAGACGGCTGGCCCTCAGTCCCAGGTTTTGTGTGGTGTAGTGATGGACAGGAGCCTCGTCCAGGTGAGAGCCCAGAGTGTCTCTGACTTT------AGTGGGTGGTGGC-TGTGTGACCGCCTG--------CTCCAAAGTTATTCTGAAATTG--AGAGAGTGACTTT--ATGAGGTAAGTATTCTAGGCAAC-CAGTTACCTTTGTTAAAACCTTCATGATGAGAAACGGTTCAGGCACTTTTCGTTGAGTTCTAGAAGGAGCGAGCATGCTGAGGGCTGTGTCCACCCCTCTGGTCATGCCCCTT-------------------------GTAATGCATG--------------------CATATGTGAGGGTGGCACATACACC--------------ACCAGCTTT-----------------GGGGCTCAGATTCGGCCCGGGTTCAGCAGCGTTCTGTGTAAGGCGCTAGGAGAGGGTGGGTTTAGGGACTCTTGTTCTGGTACATATTGCTGTCTGCAACAAAGTGCTGCTTGGGTTGCAGAGG-----------------------------------GGTGGGTGCCTGTAAGTGTGGTGCACATTTAC----ACACATTTCTACAAA-------------------ATGACTCTACCTTGTGGCACAT---TGAAGATAATTGTGTAAGTAGTTATCTCTGAAAACTA-ATATGCCACCTAATGC----TTTAACACCTGACTCTGCAGGGGTAGACGATTGTTGGATTTGTCCAGCCGTGGTCCT----------GGTTTCGTGTTCAGTGTCTGCACGTCCTGCCATCATCACTGCCACACTTACTGTTGACAGCTGTCCCTGCTGCATGCTCTTAGCCAGCTCCATCCTGTGCTCTCAGCTGATATTTCACAGGCTGGGCCTGGTGTGCTCTGGTGACTCAGTTTACTGTTTCAGGATGCACCTCTCTCTGACTGTACGGAAACTATCGAAGGGCTCGAGCTTACAGAGCAGACCTTTAGTCCCGCTAAATCTCTCTCTTTTAGAAAGGTACTCACTGCCCTGTCCTCACTAC--------CTGTCTATGCGCCTTGCTCCCCTCCCCTCCCCCCTCCCCGTCTCCTCTCTTC---AGGCATTGTCTTAGTTACTGAAGTAGCTTCAAATGGATCTTTAA--CCTGTTTGTGAGATTGTACAGAAGGTTCTGTTCTACC chr4 - 94230402 8909404 8909403 8910630 85319773 85319772 85320999 1227 TGTGTTCTGCTGCTTTCC-TTTACAGATCCGAGAGCAAAATTTACAAGATATTAAAACCGCAGGCCCTCAGTCACAGGTTCTTTCTGGTGTAGTTGTGGACAGGAGTCTTGTACAGGTGAGAGTATAAAATGCCTAAAACCTTTCGCTTAATCAACCGTGTCCTCTGCTTTCACCTAATGTGTCCCTGTAAAATTATTCTTTAATTGGCAGAGAGTAACTTTGTATAAGGTAAGTCTTAGAGGTAATACTGTTGTCTTTGCGAGAGTGCTCAGGATCAGAAATATATGAGGCTTCAGTCATGTAGCCC------AAGCATGTCTGTGGAGGA-----TGCTCCTCTTTTTTTTTGTTTGTTTTGTTTTCTTTATTTTTTGCTGAACGTAATGCATGAAATTCAGAAGGCTTATTTATATAGGTTAGATTCTTGTTCAAACCTAGTTGGTCTTTGTGACAACTTTTTGTTTGTTTGCTCTCCAAGGTTATGTATCTGTTTGAGCACAGCAG-GCTTACAGTGGGGCAGTAGTGG--TGTGTGTTAAACG--------TATGTTACCTAATATTTTATTTAAAGAGG--------AGATTGGGGAGGAAAAAAAAGCTGTTATACATCAGTAAAACTTCCAAGCTCTGTATCTGAATATACTTTAGACATCAACTGTGAATCATAGCTCCAAATAAAATAAGAATTAGAGCTATGCAGTTACTCTGTTAAACATATCTGAAAGACTTTG---AAGTCTGTATATCTGAGTGCTTTAACTGCCTTGAGATGCATTTTCTGATAC---ACTTTAAGAAGTTTGGCAAGTCTTA---TTGT--GACCATAGCTTTATTTATGTTGGGCTTCATATT----GTGTGCATGTCAATTCATTGTCATTGCAGTTTTATCTACCAGTTACTGTTTCT-TTGCATGTCTTTAGCAAGC---ACATAATGCTCTTGGTTGATGTTTTAAAGCCCGGGCTCGGTTTGCTCTGTTTACTCGATTTACTGTTGCAGGATGCTCCCCTCTCAGACTGTACGGAATCTATTGAAGGGCTCGATCCCACAGAGCAGGCCTTTAGTCCCGCTAAATCTCTGTCTGTTAGAAAGGT----ACTGCCCTGTCAT-ACTGCTCTAAATACTGT-TGTTCACCCTTCATTTTACCTCTTCCTTACCCTGACCTCTTCCCTCCGTTAGCTCATGATTTAGCTATAGAAA-AAAATAAGATGGATCTCCAAATTATGTATTTGCAATTATACAAACAGT--TGCTTTACC .....x.:x..x...:..-:::x..............:........:..:.....:..x..x...........x......:.x.x.........x:..........:..:..x..........:x:.:.:..:..xx:..:..------.:.x:::x...x.-.x..:xx:.:...:--------..x:...:.......xx.....--.......:.....--..:........x..xx...:..:-.x...::.....:x.:.::x:...x...x.....::xx.x....x::xx..:.xx..::.------:...:x.:x..:x....:-----.x.x..:..:.xx.:x..:::x..-------------------------..........--------------------:...x..x..:x.xx:::x:.x...--------------:x..:....-----------------::..:.xx.xx..x.:::.:.:x......-.:.:xxx..::...:x...x:.--x...x...x.:x.--------.x..x...x..x.::.x.x.x:..x:.:.--------:.:...x:....-----------------------------------.x.xx..::...x.x:.::xx.:x....:x..----.xx...xx..x....-------------------...xxx:...::...x:x....---....::xxx...---....xxx...x.....:x:..x-.xx....x:xx:....----.:.:.:..---...:.:x:::.x.x.:.:.x.x..:---....--::..:.:.:::.----------..:...:.:..----..x....:...xxx:...::...:...x::x:.xx..::::::x:....::..-:......:::.....x...---.:x:x:......::.:....:...:.x..x.:....::...x.......x.x....::.........x........x..:.....x............x....:...........x.::.........:......................x...x..........----...........x.-...:.--------....-.:.x.:..:.x.x::::x..:..:..::x:..:x::...:..:..:.---..x:xx..x:....:..:x...:-.:xx.x.:........::..--:x...x.x..x:...:....:.x:..--..:.:.... 18M1D124M6I13M1I14M8I22M2I13M2I23M1I60M6D18M5D24M25I10M20I25M14I9M17I29M1D22M2D13M8D29M8D12M35I32M4I15M19I22M3I12M3D22M1I16M4I8M3D25M3D4M2D12M10I11M4D53M1D19M3D166M4D13M1D5M8I4M1D47M3I23M1D20M2I26M2D9M 678/1042 65.1% 1227/94230402 0.0% 244/1042 23.4% -6000915 -88229487 +10164 chr4 + 190214555 2914862 2914861 2915046 185 CAGATGTGCCTT-----TCATCCAC-AGGGAGAGCTGGTGACGGCCTCCAAGGCCATCATTGAAAAGGAGTACCAGCCCCACGTCATTGTGAGCACCACGGGCCCCAACCCCTTCACCACACTCACAGACCGTGAGCTGGAGGAGTACCGCAGGGAGGTGGAGAGGAAGCAGAAGGGCTCTGAAGGTGAGT chr4 - 94230402 8915081 8915080 8915271 85315132 85315131 85315322 191 CAGATGTGTCTTAATTTTCTTTTGCCAGGGAGAACTGGTGACTGCTTCAAAGGCAATAATCGAGAAGGAGTATCAGCCCAAAGTGATAGTGAGCACAACAGGACCAAATCCCTTCAACAAACTCACTGATCGAGAGCTGGAGGAATATCGCAAAGAAGTAGAAAGGAAGCAGAAGGGGTCAGAAGGTTGGT ........:...-----..x.:::.-.......:........x..:..x.....x..x..:..:........:......x.x..x..x........x..:..x..x..:.......x..x......x..:..x...........:..:....::..:..:..:..............x..x......x:.. 12M5I8M1I165M 146/185 78.9% 191/94230402 0.0% 6/185 3.2% -6000219 -88230183 +10736 chr4 + 190214555 2926553 2926552 2926768 216 CCTTTCTTCTTCTGTAACCTGATGGCTGTGACTGAATGCATAGATTCTCTCCTTGTGCTTTTTTCTCCCTGTGGCTGCGTCACAAGCAGGAGACGGATGCGCTAGAGAGTACCTGTTACCCTAGTAAGTACCGTGCTGCCTCCGCTCTCCACCGGTGCCCTGCGCTTTGCCTCATTCTCCTGCTTCTTTGTTGTTTATTAAGTTTTGTTTTCTGTT chr4 - 94230402 8917690 8917689 8917891 85312512 85312511 85312713 202 CCATTCTTCTAATTTAACACAATGGCTGTGA-TGAATGCATAGATTCTCTACTTGTGCTTTTTTCTTCTTGTGGCTGCGTTACAAACAGGAGATGGATATGCTAAAGAGTACCTGTTACCATAGTAAGTATCAT------TCCATACTCTGACCGGCTTACGTGCTTTGCTTCA--CTCTTGCTTCT---TTGTTTCCTAAG--TTGTTTTTTGTT ..x.......xx.x....x::..........-..................x...............:.:...........:....:.......:....::....:...............x.........:.:.------...::x...::x.x.xx::x:.:.......:...--...:.......---......x:....--.......:.... 31M1D102M6D34M2D11M3D12M2D12M 164/202 81.2% 202/94230402 0.0% 14/202 6.9% -5991137 -88239265 +16706 chr4 + 190214555 2928161 2928160 2928548 388 CACCCACTAGACCTTGTGCCGGAGCCGACTACTGGAGATGACAGTGATGCTGCCACCTTTAAGCCAACTCTCCCCGATCTGTCCCCTGATGAACCTTCAGAAGCACTCGGCTTCCCAATGTTAGAGAAGGAGGAGG---------AAGCCCATAGACCCCCAAGCCCCACTGAGGCCCCTACTGAGGCCAGCCCCGAGCCAGCCCCAGACCCAGCCCCGGTGGCTGAAGAGGCTGCCCCCTCAGCTGTCGAGGAGGGGGCCGCCGCGGACCCTGGCAGCGATGGGTCTCCAGGCAAGTCCCCGTCCAAAAAGAAGAAGAAGTTCCGTACCCCGTCCTTTCTGAAGAAGAGCAAGAAGAAGAGTGACTCCTGAAAGCC-----CTGCGCTAACACTGTCCTGT chr4 - 94230402 8920923 8920922 8921315 85309088 85309087 85309480 393 CGTCCATTAGAGACACAGCAGGACCAGACCTACAGAGATGACAGTGATGCTGCAACTTTGAAGCAAACCCTCCCAGATCTCACCCCTGATGAGCCTTCAGAAGCACTCAGCTTCCCTCCCTTAGGAAAGGAGGAAGGGAGATGCGATGAAGATGTGTCCAAAAGCCAAACGGAATCACCTGCGG----CAGCAGATAAGGAACCCCAGCCTCAGCCT-----GCTGAAGAGGCAGCGACTCCAACAGCTGAGGAGGGGACGGCAGCTGATGCAGGTAGTGATGAATCTCCAGGAAAGTCCCCATCAAAAAAGAAAAAGAAGTTTCGCACTCCTTCCTTCCTGAAGAAGAGCAAAAAGAAGAGTGACTCCTAAAGGCCAAACACTGCAGAAACACTGTCATAT .::...:....xx:xxx..x...x.x...:xx::...................x..:..x....x...:.....x.....xx..........:...............:.......xx:x....::........:.---------.x.xxx..:x::..xx.....xx..x..:x.x...:.x.----....xxxx.:xx.:......x.:.....:-----...........x..xx.::..:.x.::.........:.x..x..x..:x.x..:..:....::........x........:..x........:........:..:..:..x.....:..............:................:..:...-----....:xx.........x.:. 136M9I39M4D29M5D155M5I20M 279/379 73.6% 393/94230402 0.0% 23/379 6.1% -5992762 -88237640 +7097 chr4 + 190214555 2929749 2929748 2930067 319 GCTGCATGGCACTGACCGCCGCTTCCAGCTT--CCTCTGAGCC-GCAGGGCCTGC-TACGCGGGCAAGCGTGCTGCCTCTCTTCTG-----TGTCGTTTTGTTGCCAAGGCAGAATGAAA---------------------AGTCCTTAACCGTGGACTCTTCCTTTATCCCCTCCTTTACCCCACATATGCAATGACTTTTAATTTTCACTTTTGTAG--------TTTAATCCTTTGTATTACAACATGAAATATAGTTGCATA---TATGGACACCGACTTGGGAGGAC--AGGTCCTG-AATGTCCTTTCTCCAGTGTAA--CATGTTTTACTCACAAATAAAATTCTTT-----CAGCAAGTTCC chr4 - 94230402 8923039 8923038 8923397 85307006 85307005 85307364 359 GCTGCATGGCACTAATGGC---TTTCAGCTTGTACTTTAACCTTGTATGTCCTCTGTACACTAGGAAGCATACAATACTTATTTTGCTAAATTGTGTTTTATTGCAGGGTCGTAATTAAATTACTAATTGCTCTATGTTTCAGTTCATTAATGGAGTCCCTCCATTTATC-------TTCGACCACATATGCAATGACTTTTAATTTCAAATTTTGTAGTTTGTTCTTTTAATTCTTTGTATTACAA-ATGAAATGTAGTCATGTATGGTATGGTTACACTCTGGGGCAAATTAAAGTCCTGTATTTTTCTTTTTCTTGTATCAATTAAGTTCTACTCACAAATAAAACTCTTTAAAAAAAGCACGTTCC .............:.:x..---..:......--x..:.:.x.:-.:.x.x...x:-...:.x:.x....:.:.x::x::.x..:..-----.xx:.....:....x::.x.:x...x...---------------------...:.x.x.x:.x:.x.:..:.x......-------..xxx.........................:x.x........--------......:.............-.......:....::::..---.....x:..xxx..x...x::.:--.:......-.x.x.:....:..:x..:.x.--:.x...:...............:.....-----x....x..... 19M3D9M2I10M1I11M1I30M5I29M21I29M7D42M8I20M1D18M3I23M2I8M1I21M2I28M5I11M 221/308 71.8% 359/94230402 0.0% 62/308 20.1% -5993290 -88237112 +4823 chr4 + 190214555 2931552 2931551 2931674 123 TACCCGCTTCACGGCAGCAACTTCCCCGCCAGGGTGGATCCGCCGGGCATAGGCACCCTGGATGGTGGCCATGGTGAGGCCGATGAGGAAAAACATCTTCCCCTGCTGTAGGCTGGGAGCGGG chr4 - 94230402 8929393 8929392 8929515 85300888 85300887 85301010 123 TACCCTTTTTACAACTCTGATTTCATTTCCTGGCTTTATTCGGCGAGCATAGCCTCCCTGGATCACAGCCATTGTTATTCCAATAAAGAAAAACATCTTGCCCTGCTGCATACTGGAAGGGAG .....x:..:..::.xx::.:...x::x..x..x.xx..:..x..:......x.x........x:::.....x..x.xx..:..:.:............x........:.x:....:..x.:. 123M 82/123 66.7% 123/94230402 0.0% 0/123 0.0% -5997841 -88232561 +6149 chr4 + 190214555 2931823 2931822 2931917 95 ACCTACTGAACTGGAAGCGCTGGTGTGTGAGGAAGCTCAGCGTGTACTCCAGGCCCGAGAACAGGAAGAGGTAGAGGAAGTAGACTAGGCCCAGG chr4 - 94230402 8930824 8930823 8930918 85299485 85299484 85299579 95 ACCTGCTGAACTGGAATCTCTGATGAGTAAGAAAACTCAGCGTATATTCCAATCCGGAAAACAGGAAGAGGTACAGGAAGTAAGCCAGGCCCAAG ....:...........x.x...:..x..:..:..:........:..:....:x..x..:..............x........::.:.......:. 95M 76/95 80.0% 95/94230402 0.0% 0/95 0.0% -5999001 -88231401 +6271 chr4 + 190214555 2932346 2932345 2932521 176 CCTACCCGTTTCTCCAGGGGCAGCGTCTCTGGCAGGAAGCAGAAGATGAACAGCAGGTCGGAGGCTGCGAAGAGCAGGGCAAACCAGGGTG---------------------------CCATTTCCAGGGGCAGGGAGGCTCCGAGCATAGGGCCCAGGGTGAAGCCCAGTGAGAAGGCCACCCCAATGACCGCCTAGGGAAA chr4 - 94230402 8935909 8935908 8936111 85294292 85294291 85294494 203 CTTACCCGTTTTTCTTTGGGAAGTGTCTCTGGAAGCAGGAAGAAGATGAAAATCAAGTCAGCTGCTGCAAACGTGAGTGCTAATAATGCTGAACGAAGATAGAAGACTTCTCCTTTTTCTGTCTCCATGGCTAGATAAGCTCCAATCATGGGACCCAGGGTAAAACCAAGGGAGAAAGCAACACCAATCATTGCCTGCAGAGA .:.........:..:xx...x..:........x..x.:.x..........x.x..:...:.xx.....:..x:xx..x..x..:x.x.x..---------------------------.::.:....x..x:..:x.:.....:.x...:..:........:..:..x..x.....:..x..x.....x.::....:x:..:. 91M27I85M 121/176 68.8% 203/94230402 0.0% 27/176 15.3% -6003563 -88226839 +7425 chr4 + 190214555 2932594 2932593 2932762 169 ACTTACCATGCCTTGACTGCGGGCCAGAGGCGAGCCCAGGTCAGCAACGATGGCCGTGGAGAGGCTGACGTTCCCTTTGCTGATGCCCCCAATCAGCCTGGAGGCCAGGAAGGCCGCAAAGCTCCGAGAGGTGGCCCAGACTGCATATGAGGTGGCCACACCCATCTGC chr4 - 94230402 8938390 8938389 8938558 85291845 85291844 85292013 169 ACTCACCATGCCCTTGCTCCGTGCTTTTGGAGAGTGCAAATCAGCAATTATAGCTGTGCAGAGGCTGACATTCCCTTTGCTTATTCCACCTACCATCCTGGAGAGAAGAAAAACGCCAAAAGACCGAGATGCAGCCCATAGTGCATAAGATGCTATCAAACCCATCTGC ...:........:.x:..x..x..:xxx..x...:x..::.......:x..:..:...x..........:...........x..x..x..x.:..x.......:xx..:..::.xx....:xx......x.::.....x.x......x..x.:x::..x.......... 169M 119/169 70.4% 169/94230402 0.0% 0/169 0.0% -6005796 -88224606 +4606 chr4 + 190214555 2933561 2933560 2933648 88 CCATACCTCCGAACAGGACACTGTTGTACCTCTTCTCCACTGGCATCCCGATGGCGGTGGCAAACCAGTCCACCCCGCCCTGCCAGGA chr4 - 94230402 8942723 8942722 8942810 85287593 85287592 85287680 88 CCATACCTCCAAACAAGACACTGTTGTATTTCCTCTCTGGAGGCATTCCAACCATTGCTGCAAACCAGTCCACACCACGTTGCAATGA ..........:....:............::..:....::xx.....:..:.:x::x.:x..............x..:.x:...x.x.. 88M 64/88 72.7% 88/94230402 0.0% 0/88 0.0% -6009162 -88221240 +11277 chr4 + 190214555 2938831 2938830 2939355 525 TTATTTTTTGAACTTTTTCCTCTTCAGAGCCTTCCATTCGCCTTCCTGTGTAGCCAGGCTGTTAAAAAGCTGCTTTACTTTCCGCTTTCTTTCCGCATCCCT--AAAAGAAACAA-------------------------------------AAGGCAAATGCCCATTTTTGGATT------AGTTCTTGGAGAGCATCTTGCCCTCTCTCTCCCACATCAG-AACCACATTAGCCACCGTGGCCACGTTCA-GTTCAAACAGGGGGAAGTGAACCTGCCTGGCTCCAAC----------CCCCAGCCAGAG-----------CCAAGGCTGTGGG-----ATGCCAGGT--------GCCCGGTGCTCTGCCCAGGG---CCACACAGCACCAAAGCTGAGTGACAC-CACAATCGTGTCGCACACAC-------------ACGTCCCCCTCACCGTTCCATGATTTCTGAGAGTTGCATCCTCGCCAGGAACTGATTGTCCTTGCGGATTTCTCGAACGGCCCCTTTAAATTCACGCTTGTGTTTGTGGATCAGCCTCTTCCTTTCCTGTTCCTCCTTACTACTGCCTTGTTTTCTTCCAAACTCGAGGCTACAACCAGAA chr4 - 94230402 8952128 8952127 8952742 85277661 85277660 85278275 615 TTAGTTCCTCCCCTTTTTCCTCTTCATAGCTTTCCATTCACCCTCCTGTGTAGCAAGGCTACCAAGAAGCTCTTTCACTTTTCTCTTTCTGGCTGAATCTCTGTAAAGGAAGCAATTAATATGTTAAATATTTCAGAAAGATTATACTAGGGAAGATAAATAAATACATTTAGACTTTACATATTCATCGGTAAGAAGCC--CCACAAATCTTAGATGTCACCAAACACTTTAATTA--AGAGCTTTCTGCACGTTCTTATGTAGAGAAATTAAACTGCAAAGTTGAAATTTAAAATGATCTCTAATGAAAATATTTGTTTTCCCCAAACTGTCCATTTTTATTTCAAGTTTAATATTGTTTATCATCACGGTCAGTGTCCCCACACAGCAAAGAAA-TGA---ACACACAGAATAACAACTCATAAACTACTGTTGAAGCAAAGGCTATTTTACCTCTCCATGATTTCTGAAAGTTGCATTCTAGCCAGAAACTGGTTGTCTTTCCGGATCTCACGAACAGCTCCTTTAAATTCACGTTTATGTTTGTGAATTAATCGCTTTCTTTCTTGCTCCTTTTTGCTGCCTCCCTGCTTTCTTCCAAACTCTAAACTGAAATGAAAA ...x..::.xxx..............x...:........:..:...........x.....:::..:.....x:..:.....:.x......xx.:.x...:..--...:...:...-------------------------------------...::....:xx:.:x...:..:.------.x.:x.:..x:..x.x.:--..x:xxx...:xx.::...x-..x...x...:::.--:x:..:x:x.x..-....xx.::x:.:...:.x..x....xx:.:.xx..:----------.:.:.::x.:.:-----------..x.::....xx:-----..x:..:..--------.::::x::::x:.x:...x.---..........xx:..:-...---....-..x...x:::x.x..:.x..-------------.x.x.:x::.:...x:..............:........:..x.....:.....:.....:..x.....:..x.....:..:..............:..:........:..:.::.x...:.....:..:....::..:..:.:x..:..:..............x.::..:x..:x.:.. 102M2I11M37I24M6I18M2D20M1I14M2D13M1I37M10I12M11I13M5I9M8I20M3I16M1D3M3D4M1I20M13I181M 341/517 66.0% 615/94230402 0.0% 106/517 20.5% -6013297 -88217105 +7564 chr4 + 190214555 2944008 2944007 2944233 226 ATGAACTACTTAAAAAAATTCTAAAGTATAACATATTTGTAGGAAC----------CTCCCTCAAATCAACTCACCTTGG-CTTGCTTTGTTTGGAGTTGCTATGTAAAGAATCCCAAGAAGAAAATTAATAAGCTCAGGTATAAACCTCTGGGACAAAGCCACATACTCCAGGAACAGGCAGCACACGAACAGGCCCTTCACCACGTCCTGGAGGGACAGGATGGGGCACTGGAAA chr4 - 94230402 8958468 8958467 8958703 85271700 85271699 85271935 236 ATTAATTAATTAGTGAAATTTTAAAGAAAAACACTAATATAAAAATGCATTACCCATTTATTCTAACAAACTCACCCTGGGCCTGCTTT-TTGGGTAGAGATATGTGAAGTACTCCAAGAAGAAAATTGATGAGTTCTGGTACAAATCTTTTGGAGAGAGATACATATTCCAGGAGCAAAGAGCATATAAACAAACCTTTAATAACATCTTGCAATGTTGTGATGCGACACTATAAA ..x..:..x...:x:.....:.....x.x....:xxx.:..::..:----------:.:x:..x..:x........:...-.:......-..x..x:xx.x.....:...x.::..............:..:..:..x....:...:..:.x...x.:..x:.....:.......:..::x....:.::....::..:..x.:x..:..:..x.:x.x::x....x.:....:x... 46M10I24M1I8M1D147M 150/225 66.7% 236/94230402 0.0% 12/225 5.3% -6014460 -88215942 +6724 chr4 + 190214555 2945122 2945121 2945269 148 ACGCACCTTGGTGAGCAGCTGACTGAGGCACACGAGGGCAGGGGTCACCACTGGGTGCCAGAAGTCGGAAGTTGGAAATAGCAGCCCAGTGATTTTCAAATAAATGAGCTGGAAAGAAAGTGTTACCACAGGTTAAAGAAGGTAAATG chr4 - 94230402 8959556 8959555 8959699 85270704 85270703 85270847 144 ACATACCTTAGTAAGCAGCTGACTCATGTATATAAAAGCAGGAGTTACAACTGGATGCCAGAAGTCAGATGTTGGAAACAGCAGAGATGTAATTTTCAAATAAATAAGCTGATAGTGAA----TAAAACATAGTACAGAGGCAAAATG ..::.....:..:...........x.x.:.:.::.::.....:..:..x.....:...........:..x........:.....xxxx..:..............:.....:x.:x:..----..xx...x:x..x...:.xx..... 119M4D25M 105/144 72.9% 144/94230402 0.0% 4/144 2.8% -6014434 -88215968 +9438 chr4 + 190214555 2946408 2946407 2946574 167 TTACCACATCCAACCCTGGCAATGCCGCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCATGCATCGCATCTCGGAGAACAAATTTGATAGCGTCACTTGCAGATTCAGGAAACATCTGGCAAAGATGATATAAGTGCCTGTTAAGCAGAAATGTAAAGTCAGGA chr4 - 94230402 8961028 8961027 8961193 85269210 85269209 85269375 166 TTACCGTGCCTAAACCTGGAAATGTTGCACGGCCTTTGACTTCAATTACTTCTTCCATCTCATGTGCAGCGTCTCGAAGGACAAACTTAATATTGCCACTGGCTGCTTCAGGAAACATCTGGCAAAGATTGTACAATGGCCTATTAAGAAGAAATGT-AAGTCATGA .....::::.:..x.....x....::..x.........:::.....:.:...............:::x..:.....:..:.....:..:...x:.:....x..x.x.......................x:..:..xx....:.....x........-......x.. 157M1D9M 128/166 77.1% 166/94230402 0.0% 1/166 0.6% -6014620 -88215782 +4988 chr4 + 190214555 2947509 2947508 2947620 112 ACACCATTT-TTACTTACACAACCAACTTATCAATGACTGTGAGGTCTGGTGGGTCATCTGTAGCCAAATCGCCAACGTATTCCAAAAGAAAGCCAAACAGTTTCTGCAGGAA chr4 - 94230402 8962739 8962738 8962851 85267552 85267551 85267664 113 ACACGATCTATTACTTACAGGATGAGTTTGTCAATTGTTTTGAGCTCTGGTAAATCCAGAGTTGCTAACTCTCCAATATATTCCAGAATGAAGCCAAACAGTTTCTGCAAGAA ....x..:.-.........x:.:x.::..:.....x::.x....x......:::..xxxx..x..:..x..x....::.......:..x:...................:... 9M1I103M 81/112 72.3% 113/94230402 0.0% 1/112 0.9% -6015230 -88215172 +8275 chr4 + 190214555 2948272 2948271 2948456 185 ACGTACTTCTAATTTTGCTTTGTTTCCTTCTGCGAGACTCGGGTGGTTGCACTTCTGAATTCTCTCCACCACCAAAAGCTGCTCTTCCATCGATCTTCCTAACAACAGAGATCTCAGTTCCTCATAGGATTCAGGGGCTAT----CAAAAACACAAAACATACTGCACATTTAACATTTATATATATGT chr4 - 94230402 8963077 8963076 8963263 85267140 85267139 85267326 187 ACATACTTCCAACTTTGTTTTGTTTCCCACTGCAAGACTTGGGTGATTGCATTTCTGAATCCTCTCCAGTATAGTAAGCTGTTGCTCTACTGTTCTTCCAGCCAATAAAGATTTAAATTTCTCATAGGACTCAGGAACTGTAAGGTAAAAACAAAAAAT-TGCCAAACCTCTAAC-TTCAGTTATTTGT ..:......:..:....:.........:x....:.....:.....:.....:........:.......x:.:x:x......:.x:..:.::.x......x:x...:.:....:.x.:..:.........:.....::..:.----:.......x....:-.:.::x..x.:....-..:.xx...x... 141M4I14M1D15M1D13M 133/183 72.7% 187/94230402 0.0% 6/183 3.3% -6014805 -88215597 +3019 chr4 + 190214555 2950459 2950458 2950565 107 CTTTTGCCAGGGAGCAGCATGGGACTGGGATTTGGAAGGTGTACAGTGGCTGCGGGCTTTAGCAGGAGGAGTGTCTACAGCACCTTCTGCTCCTCCAGGTAACCTAG chr4 - 94230402 90486791 90486790 90486897 3743506 3743505 3743612 107 CCTTTGCTAGGGAGCAGCGTGGGCTCTGGATGTGGCAGCAGTGGAGCAGTGGTAGGCAGTGACAGAGCTGGTTTGTGTCACTCCTTCAGCCCTGCCTGTTAAACCAG .:.....:..........:....x::x....x...x..xx..:x..::.:x.::...xx.::...::xx:..x.x.::x:.x.....x..:.:x..x.x...x.:.. 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% -87536332 -6694070 +7338 chr4 + 190214555 2951107 2951106 2951248 142 ATCTTACTTTGTAGGAAAGCAAACGCCTGTCATCTTTATCTAGCACGAAGCCATCATTCAGATCATCTGCTGACATATGTTTTGGTTTCTTAACATTTTCATCCTCATCCTTTCCAAGCATTCTTCGAAGTCTCTCAGCCTG chr4 - 94230402 8965997 8965996 8966138 85264265 85264264 85264406 142 ATCTTACCTTGTAAGACAATAAACGTCTGTCGTCTTTATCCAGGATAAAGCCATCAGTTAGATCATCAGCTGACACGTGGCTGGGTTTCTTTTTATTCTCTTGTTCACCTATTCCACGCATTCGACGTAGTCGATCTGCCTG .......:.....:..x.::.....:.....:........:..x.::.........x.:........x.......::..x:.x........xx:...:..x.x:...:.:x.....x......xx..x....xx..x..... 142M 106/142 74.6% 142/94230402 0.0% 0/142 0.0% -6014890 -88215512 +8017 chr4 + 190214555 2952272 2952271 2952452 181 TACCTCCAGCTTCCTGAGGTGCTCCTGCTCTTCCTTTGCCAATTCTGCCTCCGTCTTCATCCTGTTAGAGGGCTGCGCCTTCATTTCAAAGCCAAGCTCGCGAACCATCATGTCATATGCATCGGGCTAAGGTAGAAAGAAGAAATTCTTCATTTTAAAAATATATTTATTTCTTATTTTA chr4 - 94230402 8967263 8967262 8967423 85262980 85262979 85263140 161 TACCTCTAGCTTCTGGAGTCGCGCCTCCTCCTCTTTTGCCAATTCTTCTTCTGTCTTCATCCTTTCTGAAGGTTTTGCTTTCATCTCGAATCCAAGTTCTCGAACAATCATATCATATTCATCAGGCTA----------AAGAAATATTT----------ATACAGTTGTTTATTATCTTA ......:......:x...x:..x...x...:..:............x.:..:...........x.:x..:..:.x:..:.....:..:..x.....:..x.....x.....:......x....:.....----------.......x:..----------...:.x..:...x....:... 129M10D11M10D21M 125/161 77.6% 161/94230402 0.0% 20/161 12.4% -6014991 -88215411 +8594 chr4 + 190214555 2954417 2954416 2954579 163 AACCCACCTTCTCTTGTTTTGACTTGGCAATGAGCTCTTCAATCAGCTCTTTCCGGGACTTCGGTTTCTCCCGCTCCTCGCCTTCCTGTTGAGT------CTTCTTGTGAAGGAGCCCACCGCCTCCTCCAAAGTGGGCAGCAGTCAGCTCAGCTGGGGGCAAAAGGCA chr4 - 94230402 8969315 8969314 8969483 85260920 85260919 85261088 169 AACTCACCTTTTCTTGTTTAGATTTGGCTATCAACTCTTCTATGAGTTCCTTCCTAGATTTAGGTTTTTCCTCCTCTTCATCTTCCTGCTCAGTTGACGCTTTTTTACGAAGAAGGCCTCCACCCCCTCCAAAGTGAGCAGCAGTTAACTCAGCTAGAAGAAAAAATCA ...:......:........x..:.....x..x.:......x..x..:..:....x:..:..x.....:...:x...:..::.......:.x...------:..:..::....:..x..x..:..:...........:........:.:.......:.::.x....:x.. 94M6I69M 122/163 74.8% 169/94230402 0.0% 6/163 3.7% -6014898 -88215504 +8771 chr4 + 190214555 2956663 2956662 2957772 1110 GCCTCACCAGACAACGTTCCTCGATCCTCAGCATCGCTGTCACTGTCCACAATGTCATTATGCTTCTCGATGTCTGCCAAAGACTGGCCATAATGAGTCAATTCTTCATCTTCATTTAGATTGTAGATGCTTTTTTTCTCATGATGTCGCTGACAGAAGAGAAAAAAAGTTTCC----TAAAATTACCA---CTTCCATTTCACAGCAAAAAAAAAAAGATAAGGTAGATATATATATTTCCATTATATTTGAAA-------TATGACAACGAATCCTAAGCAGCCTTAAAGAGTATTTTGGGTCAACTAAGCAATGATTCATGATTCAGACAGAAATGAAACTCATG-----GAGGGTAATTCTTTTTTT-TCCTT---------CAGACAGAGTCTCGCTCTG-----TTGCCCAGGCTGGAGTGCGGTAGAGTGATCTGGGCTCACT--GCAACCTCTGACTCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAG---GCATGCGCCACCACGCCTGGCTAATTTTTGTATT-TTTAG---TAGAGACGGGGTTTCATCACGTTGGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAT--TACAGG--------CATGAGCCACCGCGCCCGGCCTCATGGAGGGGAATTCTTAAATAA-----GCCCAGGG--GCCAGTTTCCACTCCAGC-----AATGCTGCTCAGCTGAGAACTCCTGT----GCACACTGCTGCCGTGTAGTAGAGTTAAGGCATTTATCCATTC---AGCTAACATTTGCAGAAGAGGTTGCTTCTCCTTTGGCCTAGCCAGATAAGGCACAGGATT------CGAGGGCTATCCCCTGGACC-TTCCGAGTGCCCAGGAACA------------------TGCAAAACATGCAGAGTCAGCCTTC-----TCCTTGGCCTT--GACTTCCCTGTGAAATGTACAGCAAAAACCCTCCT---CCAGTTTCTTT--------------------CCATACCTGCTGTTCCAGAGCAAACCTCTTCATCATCTTCTCCTCGGGGCTCATGTTGCTGTTGTATTCTCCGAAGCGTTTATCTCTGAATACATTGGATTTATCCCTTTCTTTGTACTCTTTTAGTAAAGTCTGTGTACGCTGGAAAACAGGTCAGAAA------CAATCTCACAAAA chr4 - 94230402 8970409 8970408 8971559 85258844 85258843 85259994 1151 GTCCTACCTGACAATGCTCCTCTTTCATCTGTGTCACTATCGCTATCAATAACATCATTCAGTTTTTCAATTTCTGCCAAAGATTGGCCAAAATGAGTTAATTCTTCATCTTCGTTGAGATTATAGATATTTTTCTTTCCATAATTTTGCTAAAAAGAACAACAGAAAAACCCCACAATTAAATAACAAAAATTTTTAGTTCCCAGGCAACAAATTAA-------TAGAGCCAGCAATTTTCACTCTGGTTGAGAAGATTCTTGTTCCAG----TCCTTTGCTGTTTTAAGAACACTACCAGGTTAACC----------TTCTTATTCAAAATACAAGAAGCCTTATATGAGAAAGTATGATGCTTTCATTATTCTTATAGTAATGCAGAAATGAAGTAACTCAGAAAACTTAAGAAAGCTTAAGTT--------TTATCTGTATACAATTAACAACAATT--CTTCATTATTCCA-----TTTCTGGCCTGA--------AGAAATTG--ACCATAGCTTACATAAATTACCA-GCAGGGTACAATATTACACTGTTCAGCTCTGGAGATTGAGTATGATAGTAT--GAAAGAATGCT------------ACTACACAAGCAATTCACATTA------CAGAGTGACAGCATGTTACGGAGTTCCTCTAGTCAGCAAATGTTCTCCAACAGCTGTACTGGA-TTCTCAAATTGTACTTGCTGGTGGTTGCCATTTTCTAATCCAATTTCCAAATCACAACAAGTCTAGAACAGTCAAAGAAGAACAATAACTCTGCTTAAAA-----ATGGCTTTCTTGCACATCAGAGCTCAAATGTGCTCAAAGAATT--TTCTTCTT---------CAGAAAAACAGCTGTCTTGCAACACCAGGAATTTTTCATGGAAAATTCTGGATTCCCATAAACAGATGCTTTTTCATAGAAGTTCAAAACATACAAACAAAACAAACAAAAAGCATTAGCCTGCAAAACCCTCTGTTAAGGGTA--------ACCCTCCCAACCCAATTTTTCTTTTTAATTCCCATTCTTACACTTTACCTGTCTTTCCAAAGTGAATCGTTTTATCATCTTTTCCTCTGGACTTATTTTGGTGTTATATTCACCAAAACGTTTATCTCTAAATACATTTGTCTTTTCTTTTTCTTTATATTCTTTCAATAACGTTTGTGTTCGCTAGAAAAAAAAAAAAAAAGGAGACCAAGTTCAAAAAA .:.::...x.....:.:.....xx..x..x.::..:..:..:..:..x.:..::.....xx.:..:..:..x...........:......x.......:..............:..x.....:.....::....:..::...:..x.:...:.x.::.:x:.x.:...:x::..----.x....x..x.---:..::.x...x...xx..x...xx..-------....xx:.xxx....:..:.x.:x....:.-------.:.xx..:----....xx..x.::....::.xxx.x:::...:...:----------.:x.x.....:.xx:x..x:.:x..:..:-----:..x:.:..x....:x..-.:...---------....x.x::xx.x:...x.-----..:xxx.:...x:...x--------.x.....x::x..x.--:....xx:.--..:.x.x:...x.-----.:..:x....x.--------..x.::..--.::....---:...:x:::....-..xx..:xx.x.x..::.:.-..:..---.:....:x.:..x.x..x:::.--.xx..:...x.------------..:x..::.x.x.::...x.:.------..:....x::.x..--...:.:--------x:.x...x.x:.:x.:.x:x.xxx..x.xx...-....:....x:-----..:x:x..--....x....:.x....::-----...xx::x:x..::x.....xx:::x----.x...x.:x:x.:.:x..:x.-----.x...x..:x.x..:x:---....x.x..x...xx..::::..--....:...---------....x..:xx:.x.xx..------.x...:x.x.::.x....xx-...:.::.x....x:....------------------.x........:..:.xxx.:.xxx.-----x.x..:....x--:.x::.:....x..:x...--------.......:---...:...:.:.--------------------.:x......::x.....:..::..:.x:..:........:.....x..:..:..x...x....:.....x..:..:...........:........x.x:..x..::.......:..:.....:.:...x..:.....x....:.....x.::xx.:...------...x:...x.... 174M4I11M3I26M7D30M7I8M4D35M10D29M5I18M1I5M9I19M5I17M8D15M2I9M2D13M5D12M8D8M2D7M3I13M1D20M1I5M3I22M2D11M12D22M6D14M2I6M8I33M1D11M5I8M2I18M5I26M4I21M5D17M3I23M2D8M9D18M6I20M1I19M18I25M5I11M2I19M8D8M3I11M20I160M6I13M 639/1018 62.8% 1151/94230402 0.0% 225/1018 22.1% -6013746 -88216656 +7936 chr4 + 190214555 2963089 2963088 2964129 1041 TCCTGCCTTCCGGCTCCCCGTGCGCCCCCCGCTTACCTTCCTGAGGGCCCGTGCGCGAGACACCCCGGGCAGTCCCACGTCGTGGCGCGTCTTCCGGCCCAGGATCTGGAACTTCTGCCTGTTAACTTTCACCTCGAACGGATTGGAGTTGGCCTTCGCCG-----GGCCCCCTCGCGCTCCCGCC----GGCGCCCCGGAGGCCTTCCT-TCGCGCCCCGACCTTCTTCGCCTTCGCCATGGCGCGCGCCCCG-----------------------------CTGCGCCCAAGGGCCCGAGACCCGAAGAGA--GACAGGCGCGC----------------------GCTACCCTAAGACACGTGCCGGGCCGCGGAACCGCTTCCTCGTCTCGCGAGAACAGCGCAGCACCTCCGA---CTCGCGAGAAGTAAACACCGCGCCCGCAGGCTCGGCTTACTCGCCGATAGGCTCAGCGACTACAACTCCCAGCAGGCCACGCG-CCGCGGCCCGCCGTGTACTCTTGG-----------CGCAGGGCCTTCTGGGAGCTGTAGTGCCCCGGCCGCGGCGGCGAGGGGCGCTCCCTCTTCAGCTAAGCCGTTAGCGCCGAGCCCGCCCGGGAG----------------CGGGTCGCCGGCCGCGGCGGGCGCCCCTGCCAGTGAGCCCCTGTCCGAAGTGAGCCACGGCATTGACTCGGGGCTGCCCGGGGG---------CAGGGCACTGAGGAGGGAGTTGCGCGCGCGAGGCGAGGGCGA-TGGGGCCAAGAAGAACCGGGGCGATAGCGCGGCAGCGGTGACAGCTGGGACCCGCCGCGGTCGGGCTGCCCCCTCCCCTCGCCCC-------------GACCGCTCCC--------CTGCTGGTGAGGGCCTGCGGAGGCGGCGGCGGCGGCGCCCTTGGTGGCAGTGGTGGCGGCGGAGCAGCCTCCCGGGATCGTGTC-----CGGAGCTCGAGGAGAGGGTGGTGCCCGGCGAGCTATGCACGGGGGCGGCGGCGTCTCCTCCTGTTCCGCCTCCTCAGTCTCCTCGGTCTCGCAGAATCCGCCGGCGGCGGCGGCGCCAGGACATGGAGCTCGAGAACATCGTGGCCAACTCGCTGCTGCTGAAAGCGCGTCAAGGTGGGTG chr4 - 94230402 8972816 8972815 8973829 85256574 85256573 85257587 1014 TCCTCCCTCCCCATTTCTGATGT-----CCTCTTACCTTCTTGATAGCCTTGGACCGTGACACACCAGGCAGACCCACATCATTCTTGGTCTTCCTTCCCAAGATGTTAAACTTCTGCCTGTTGACCTTCACCTCAAAGGGGTTGCTTTTCACCATGGCTATGGTTGGCTCTGCTGAGCCCTTGGCTTTTGAAGATGTGGAGGCCTTTTTCTTGCG-------CTTTGCCGCCTTCCCCATTGCTGGCTGCTTGTGTGGGTGAGGAGAGGCTCAGCACACACTCGGCACCCAGTGGCT--AGATCTAGAGAAGCCAACAGACCAGCCAAAATGGCGTTGACGAGCAGAGCGTCCCTCAG------GCCTGACTGCGGTTC----TCCAGGTCGCGCGAGACTTG-------CCTCAGAAATCCCGCGAG----AGCCGGTGGGGTGATCGGCACGGTGTAAACG--GAGCAGTGCGGTGACTGC-ACTCCC-GCAACCGGCGTGCCCGAGCTCCACCACGCACCGGCAGGGAGACACTCTCGCGAGGCTTTC-----GCCCAAATATCGCGATATCCGCCGCAATGGGAG--------------AAGCCG-----GATGAGGCCGAATGAGGTAACTCACTACGTATCCCGGCGTGCAGAGCGCGACGTGCG--CCTGGGAGAGGGC-------------GAGTTGTG----TAGCGCGATGCCTTCTGGGAGTTGTAGTTCCAAGGTAGTAGGGCGGGGACAGCG---GCGGGGCGGAGCTGGCTGAGGC------------GGGCGCTCGAGCGATGATCGGGGCGGGCGGG---CGCTGC-------CTGCTCCTTGCCTCCGCCCTCggggaggggggaggccggtgccggagcgagcagcgggtgatgg-----ggaagaggcgagcgcggcg--ctgaggtcccgcggggccggatgagcggcggcttggcgtcgcggcggtggcggggctggaggagggggcg------------------aaggaggcagcaggggcggCCTCCACTCCGGCTGCCCTG-------------------------AGGGGAAGGAGCCCCCGACCATGGAAATCGAGAACATCGTGGCCAACACGGTGCTGCTGAAAGCCCGAGAGGGTGAGCG ....x...:..x::.:.:x:..:-----..x.........:...x:...:xx.xx..x.....x..:.....x.....:..:.xx:xx.......xx....:...x.x:..............:..:........:..x..:...xxx..x:..x.x..::-----...:.:x::.x..:.::.x.----.:x.x:x:.........::.-.:...-------...:x:.......x....x..xx..xx.::.-----------------------------.x..:....:x...:--...:.:::...::--:....:.xx..----------------------..xx....x..------...x.:.:....xx.----...xx...x.......x:x.-------....x..---.:......----.:x.:x:.x.x:x::x...x...:x..xx..--..xx:.:x.:.:....:.-......-...:x.x:..:.-...x.x:..:..::.:..:xx::.-----------...::...:...-----..:xx.:.::.x..::xx.x..x..:.x...x.--------------......-----.x:...x...xx:.:.:x----------------...xx:..x.:x....:..x...--....xx..x.:..-------------...::::.----.::.x..:x..:x:.:...:.---------..:..:.x.::..x...:::x...---...:....::.x:.:-..:...------------.....x.x.x...:::::x.x.:.:.x:...---...:..-------....:..:.x..::.....:-------------.:...x.x..--------.x..x.....x..-----...:.x....:xx......--..x:.xxx.x.:..x.x...xx....:..xx.::..x:...:.x.-----...:...x......:...:.------------------.x..:...:..:.x.x.xx.::.:::....x..x.:.x.-------------------------:.x..x:.x:..x..x.:x......:x....................x..x.............x..xx.:....:.:. 23M5D133M5I20M4I20M1I5M7D31M29I15M2D13M2I11M22I11M6D15M4D20M7D7M3I8M4D31M2D18M1D6M1D12M1I24M11I12M5D33M14D6M5D18M16I23M2D13M13D8M4D21M9I24M3D15M1I6M12D31M3D6M7D20M13I10M8I13M5D19M2D45M5I20M18D39M25D79M 567/884 64.1% 1014/94230402 0.0% 287/884 32.5% -6009727 -88220675 +3511 chr4 + 190214555 2976307 2976306 2976380 74 CTGCAGCCTTGACCTCCTAGGCTCCAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:..:..:..x....x.:.x.xx:x........::::.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -15220819 -79009583 +5508 chr4 + 190214555 2984490 2984489 2984614 125 TGCCTTTTTTCTCCCAAATTCAGGAGGATATGGCAAAAAAAGTGGTCGTAGTAAAAAATGGAAGGAGATACTGACACTGCCTCCTGTCAGCCAGTGCAGTGAGCTTAGACATTCCATTGGTGAGT chr4 - 94230402 8984337 8984336 8984446 85245957 85245956 85246066 110 TGTTTTTTTTCTTCTA---------------GGCAAACGGAGTGGACGTAGTAAAAAATGGAGGGAGATGCTGAAGTTGCCGCCTGTTAGTCAGTGTGAAGGTATTAGATGCTCAATTGGTGAGT ..::........:.:.---------------......x::.....x................:......:....x::....x.....:..:.....:::x.:xx.....:::..x.......... 16M15D94M 83/110 75.5% 110/94230402 0.0% 15/110 13.6% -5999847 -88230555 +8984 chr4 + 190214555 2988698 2988697 2988848 151 TTTGCTTCTTATCCCTTTGCTTCACCCAGAAAAGGATTATAGCAGTCTTTGTGACAAGCAACCGATAGGAAGACGTCTCTTCAGGCAGTTCTGTGATACCAAACCCACTCTAAAGAGGCACATTGAATTCTTGGATGCAGTGGTGAGCAGT chr4 - 94230402 8985025 8985024 8985169 85245234 85245233 85245378 145 TTTATTTCTCATCTCTTT------CTCAGAAAAAGATTATAACCAGCTTTGTGACAAACAGCCGATAGGAAGACTTCTCTTCAGGCAGTTTTGTGATTCCAGACCAGACTTGAAAAGATGCATTGAATTTCTGGATGCAGTGGTAAGCAGT ...::....:...:....------.:.......:.......:.x:x...........:..:.............x...............:......x...:...x:x::.:..:..:::.........::.............:...... 18M6D127M 116/145 80.0% 145/94230402 0.0% 6/145 4.1% -5996327 -88234075 +3569 chr4 + 190214555 2994286 2994285 2994364 79 CTGCAGCCTCTGCCTCCCGGGTTCAAGTGATTCACATGCCTCAGCCACCTGGGTAGCTTGGATTACAGGTGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:xx:x..:.:...........x......x.x.......x:::::......x.:.:....--:......... 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -15202840 -79027562 +3329 chr4 + 190214555 3001068 3001067 3001147 80 TGAGACTATATATATATATATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATA chr4 - 94230402 86633717 86633716 86633796 7596607 7596606 7596686 80 TAACATCATGTGAATATGTACTTGGAAGTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATA .:.x.::..:.:x....:..:x..x:x..x.x.....x...:.....:.:x..x....:......:.:.x.......... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -83632649 -10597753 +3239 chr4 + 190214555 3001074 3001073 3001141 68 TATATATATATATATATGT---------------GTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATA chr4 - 94230402 70982598 70982597 70982680 23247723 23247722 23247805 83 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA .........x...x:....---------------........:.....:..:......x:...x:...:....:...:.:.:. 19M15I49M 53/68 77.9% 83/94230402 0.0% 15/68 22.1% -67981524 -26248878 +3294 chr4 + 190214555 3001087 3001086 3001167 81 ATATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAGGTATATATGTGTATGTGTATATATA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x....:..:...x.x...::....x:.:.:.:x.....x....x:..:..x..:..:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -78400206 -15830196 +3221 chr4 + 190214555 3001088 3001087 3001142 55 TATGTGTGTGTGTGTGTGTATATATATGTATATATGTGTATGTGTATATATATAG chr4 - 94230402 70982629 70982628 70982683 23247720 23247719 23247774 55 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGG .:.........:........:....:.x:...x......:..::..:.:.:..:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -67981541 -26248861 +3000 chr4 + 190214555 3001165 3001164 3001233 69 ATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTA chr4 - 94230402 38209587 38209586 38209655 56020748 56020747 56020816 69 ATATGTATATATGTGTATGTGTGTTCATATCATGATATCAGTATTGATATCAGTAAGTATCTATATGTA ......................:.x:....xxxx....xx....xx:...xx:..x....x...:.... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -35208422 -59021980 +3739 chr4 + 190214555 3001186 3001185 3001348 163 TATATATATGTATATATGTGTATGTGTATATATATGTATATATGTGTATGTGTATATATATACA-TATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACAC chr4 - 94230402 14964731 14964730 14964884 79265519 79265518 79265672 154 TAAATGTATAAATACAAGTGC-TGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT---------TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x..:...:x...:.x...:-..x.:.:x..:.x:x..::..x....:::x:.x.x.x::.x.-.::..x......x.x....---------.:..x.:...x...::.x.:::...::.:.:....:...:x:....xx:.......::............. 21M1D42M1I19M9D71M 96/153 62.7% 154/94230402 0.0% 11/153 7.2% -11963545 -82266857 +3480 chr4 + 190214555 3001215 3001214 3001350 136 ATATATGTATATATGTGTATGTGTATATATATACATATATGTATATATATGT-------------GTGTATGTATGTA-------TGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGC-TGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x.......x..:::x:..:-.:x::.:x....x.x...:..x.:..:::-------------...:..x...:..-------...:x.....x.:..:.x.::..:.::.:::....:..x:..:.:.xx........::............. 22M1D29M13I13M7I71M 87/135 64.4% 155/94230402 0.0% 21/135 15.6% -11963515 -82266887 +3180 chr4 + 190214555 3001225 3001224 3001313 89 ATATGTGTATGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTG chr4 - 94230402 64944124 64944123 64944212 29286191 29286190 29286279 89 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG .:..:x:..:..:..x...x.....x............x....x.xx.....x.x.x...x:::...:::x.x.::..:...:.:.:.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -61942899 -32287503 +3610 chr4 + 190214555 3001229 3001228 3001358 130 GTGTATGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACACACACATAT chr4 - 94230402 73121101 73121100 73121216 21109187 21109186 21109302 116 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATAT--------------AAATACGCCCACAGAGACACACATGTATAAGCAAAT ....:::..:....x:.....:....::.:.x.x:::..x...::..:....:x:.....:x::....:.:x...:....--------------.x....:.x....x.x.......:::.:.x:..x.. 80M14D36M 74/116 63.8% 116/94230402 0.0% 14/116 12.1% -70119872 -24110530 +3115 chr4 + 190214555 3001233 3001232 3001311 79 ATGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ......:...:.:.:....x.::.:...x..::.:......:x.::..xx.......:...:.:.:.::x.:.:.x:.. 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% -5394555 -88835847 +4070 chr4 + 190214555 3001234 3001233 3001380 147 TGTGTATATATATACATATATGTATATATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACACACACATATATATATATATATTTTTTTTTTT chr4 - 94230402 73121102 73121101 73121228 21109175 21109174 21109301 127 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATA--------------GGTACACGAGTATATGTGAGTACATATAAATACGCC------CACAGAGACACACATGTATAAGCAAATTTCCTTATTTTT ....:..::....x....:.::....:.:.x:x.::.:x...::..:.....--------------x...:.::x..:.:..............x.:..:.x------....x.x........:....x::.x..x.::..x..... 52M14D36M6D39M 86/127 67.7% 127/94230402 0.0% 20/127 15.7% -70119868 -24110534 +3112 chr4 + 190214555 3001261 3001260 3001347 87 ATATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACAT-----------TA-ATACACACACACACACACAGACACA ..:.....:.:...:::..x::..::.:x.......:....:x..:..-----------..-...:...............x..... 48M11D2M1D25M 56/75 74.7% 75/94230402 0.0% 12/75 16.0% -5394527 -88835875 +3903 chr4 + 190214555 3001263 3001262 3001359 97 ATGTGTGTATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACACACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTG--------------CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ............:..--------------....x.:......x..::.:...:..xx.....xx.:.................x.....x.::x... 15M14D68M 65/83 78.3% 83/94230402 0.0% 14/83 16.9% -5394525 -88835877 +3842 chr4 + 190214555 3001270 3001269 3001374 105 TATGTATGTATGTATACACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACACACACATATATATATATATATTTTT chr4 - 94230402 22514816 22514815 22514912 71715491 71715490 71715587 97 TATGTATCTATGTATACACAAACACAAAGATATGTACAAATGTTTGCAAGTACATATGCATGAatatatatatat-------tatatatat-tgtgtatattctt .......x............x...:.x.x..:.:..:.x:...x..::.........:..::x.:.:.:.:.:.:-------:.:......-.:.:......:.. 75M7D9M1D13M 69/97 71.1% 97/94230402 0.0% 8/97 8.2% -19513546 -74716856 +3618 chr4 + 190214555 3001286 3001285 3001363 78 CACATACATATATATGTATATATGTGTGTGTGAGTACATATACACACACACACACACACACACACACACATATATATA chr4 - 94230402 54293151 54293150 54293228 39937175 39937174 39937252 78 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..x..:..:..x.............:.....:x.xxx:...::.x.xxx::......x...::............... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% -51291865 -42938537 +3152 chr4 + 190214555 3001327 3001326 3001375 49 ACACACACACACACACACACACACACACATATATATATATATATTTTTT chr4 - 94230402 87372750 87372749 87372798 6857605 6857604 6857653 49 ACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ...........x.........:x:.:..:...:..::.........:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -84371423 -9858979 +3144 chr4 + 190214555 3001331 3001330 3001387 57 ACACACACACACACACACACACACATATATATATATATATTTTTTTTTTTTTTGAGA chr4 - 94230402 33661791 33661790 33661847 60568556 60568555 60568612 57 ATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTTAGA .:.....:...........x.x.:......:....xx:.:.x.....:.....x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -30660460 -63569942 +5477 chr4 + 190214555 3004208 3004207 3004340 133 TATTTGGTTTGTACTGTATTAAGTTGGCAGCCCCTTTACCAGAAATACCTCCAGATGTTGTGACAGAATGTAGATTGGGACTGAAGGAGGAGAACCCTTCCAAAAAAGCCTTTGAGGAATGTACTAGGTAAGT chr4 - 94230402 8989819 8989818 8989948 85240455 85240454 85240584 130 tgttttttttaaattatGTTAAGTCTGCAGCACACTTGCCAGAAATACCTCAGGAAACAGTAAATGAATGTAAAGCAAGACT---GGAAGAGAATCCTTCTAAAGATCTTTTTGTGGATTGTACTAGGTAGGT .:...xx...:x.:.:.:......:x.....x.x:..:.............x:..x::x..:.xx.......:.x:::....---...:.....:.....:...:.xx::....x...x...........:.. 82M3D48M 91/130 70.0% 130/94230402 0.0% 3/130 2.3% -5985611 -88244791 +3013 chr4 + 190214555 3007292 3007291 3007329 38 GATTATTATCTCTGTTTTACAGAAGGAGAAACTGAGGC chr4 - 94230402 29765997 29765996 29766034 64464369 64464368 64464406 38 GATTAGTGTCTCTGTTTTGCAGAAGGAGGAACTGAGGC .....x.:..........:.........:......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -26758705 -67471697 +6374 chr4 + 190214555 3007726 3007725 3007846 121 CTTTTTCTAGAGTTGCCCATAACTACCTAAGAGGGGAACCATTTGAAGAATACCAAGAAAGCTCATATTTTTCTCAGTTTTTACAATGGAAATGGCTGGAAAGGTATGTACTGATTTTAAA chr4 - 94230402 8991217 8991216 8991336 85239067 85239066 85239186 120 CTGTTGCTAGAATTGTCCATGAATACCTAAGCAGGAGGCCTTTTGAAGCTTACCAAGAGAGTGTGTATTTTTCCCGGTTCTTACAGTGGAAATGGCTGGAGAAGTAAGTG-TATTTTTAAA ..x..x.....:...:....:.x........x:..:::..x.......xx........:..:x::........:.:...:.....:..............:.:...x..:-.:x....... 110M1D10M 91/120 75.8% 120/94230402 0.0% 1/120 0.8% -5983491 -88246911 +5421 chr4 + 190214555 3009631 3009630 3009718 88 TTTTTCTCATTGATTAGGCAACCCGTAACAAAGAACACATTTAGACATTACAGAGTTCTAGGAAAAGGCGGATTTGGAGAGGTGAGTA chr4 - 94230402 8991801 8991800 8991888 85238515 85238514 85238602 88 TCTTTCTTTCTTATCAGGCAACCAGTAACCAAACACACGTTTAGGCATTACCGAGTACTTGGCAAAGGTGGATTTGGAGAGGTGAGTA .:.....:x:.x..:........x.....x..:x....:.....:......x....x..x..x.....:................... 88M 71/88 80.7% 88/94230402 0.0% 0/88 0.0% -5982170 -88248232 +11336 chr4 + 190214555 3013684 3013683 3013850 167 CTAGGTTTGCGCCTGTCAAGTGCGAGCCACAGGAAAAATGTATGCCTGCAAAAAGCTACAAAAAAAAAGAATAAAGAAGAGGAAAGGTGAAGCTATGGCTCTAAATGAGAAAAGAATTCTGGAGAAAGTGCAAAGTAGATTCGTAGTAAGTGTCTCCTCTTAGTCTT chr4 - 94230402 8992628 8992627 8992794 85237609 85237608 85237775 167 CTAGGTGTGTGCTTGTCAAGTACGTGCAACAGGAAAAATGTATGCTTGTAAGAAGCTAGAAAAAAAGAGAATAAAGAAGAGGAAAGGAGAATCAATGGCTCTAAATGAAAAAAGAATCTTAGAAAAAGTGAATAGTAGGTTTGTAGTAAGTATCTACTTCTAATCTT ......x..:..:........:..x..x.................:..:..:......x.......:....................x...x.x..............:........::.:..:......x.x.....:..:.........:...x..::..:.... 167M 139/167 83.2% 167/94230402 0.0% 0/167 0.0% -5978944 -88251458 +3044 chr4 + 190214555 3014285 3014284 3014318 34 TCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGACA chr4 - 94230402 50117658 50117657 50117691 44112712 44112711 44112745 34 TCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCA ...............................:.. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -47103373 -47127029 +13871 chr4 + 190214555 3019629 3019628 3019842 214 TGCTGTCTTTAGGTTAGTTTAGCCTACGCTTATGAAACCAAAGATGCCTTGTGCTTGGTGCTCACCATTATGAATGGAGGGGATTTGAAGTTTCACATTTACAACCTGGGCAATCCCGGCTTTGATGAGCAGAGAGCCGTTTTCTATGCTGCAGAGCTGTGTTGCGGCTTGGAAGATTTACAGAGGGAAAGAATTGTATACAGGTAAGAACGGT chr4 - 94230402 8993134 8993133 8993347 85237056 85237055 85237269 214 TGCTCTTTTTAGGTTAGTTTATCCTATACGTATGAGACAAAAGATGCCCTCTGTTTAGTGTTAACCATAATGAATGGAGGGGATCTGAAGTTTCACATATATAACATGGGAAATCCTGGCTTTGATGAAGAAAGGGCTATTTTCTATGCTGCAGAACTGTGCTGTGGTCTGGAGGATTTGCAGAAGGAGAGAATTGTTTACAGGTCAGTACAAT ....x.:..............x....::.x.....:..x.........:.x..:..:...:.x.....x...............:.............x..:...x....x.....:...........:x.:..:..::................:.....:..:..::....:.....:....:...:........x.......x..x..::. 214M 173/214 80.8% 214/94230402 0.0% 0/214 0.0% -5973505 -88256897 +4466 chr4 + 190214555 3022356 3022355 3022463 108 TCAGGAATCACAGTGCCAACTTCTGAATAATTGGGCCTTTTGTT-GTTGTTTCTTGTAGAGACTTGAAGCCTGAGAATATTCTCCTTGATGATCGTGGTAAGTGGGCAA chr4 - 94230402 8997340 8997339 8997448 85232955 85232954 85233063 109 TCATAAGTGATAATCTTGCCCTCTGTGTAATTAACACTTTTATTCATTTTAATTTATAGAGACCTGAAGCCTGAAAATATACTCCTTGATGACTGTGGTAAGTAAATAA ...x:.:.x.:.:.x:::x.:....x:.....::xx.....:..-:..x.xx:..:.......:..........:.....x...........::.........::::.. 44M1I64M 74/108 68.5% 109/94230402 0.0% 1/108 0.9% -5974984 -88255418 +3226 chr4 + 190214555 3024860 3024859 3024895 36 AAAACAAACAAACAAACAACAACAACAACAACAAAA chr4 - 94230402 79230835 79230834 79230870 14999533 14999532 14999568 36 AAAACAAACAAACAAACAATAACAACAACAACAAAA ...................:................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -76205975 -18024427 +3310 chr4 + 190214555 3024860 3024859 3024911 52 AAAACAAACAAACAAACAACAACAACAACAACAAAACCAGTAAAATATTTCT chr4 - 94230402 70351540 70351539 70351591 23878812 23878811 23878863 52 AAAACAAACAGACAAACAACAACAACAAAAAGAATACCTGAAAAGTTTTTCT ..........:.................x..x..x...x.x...:.x..... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% -67326680 -26903722 +5360 chr4 + 190214555 3027908 3027907 3028011 104 ACAGGACACATCCGGATTTCAGACCTCGGTTTGGCCACAGAGATCCCAGAAGGACAGAGGGTTCGAGGAAGAGTTGGAACAGTCGGCTACATGGGTTCGTGAGA chr4 - 94230402 8999230 8999229 8999333 85231070 85231069 85231173 104 ATAGGACATATTAGAATTTCAGATCTTGGATTAGCTGTGCAGATTCCAGAAGGAGAAACGGTCAGAGGACGGGTTGGCACTGTTGGTTACATGGGTATGTGAAA .:......:..:x.:........:..:..x..:..::::x....:.........x.:.x...:x.....x.:.....x..x..:..:.........x:....:. 104M 75/104 72.1% 104/94230402 0.0% 0/104 0.0% -5971322 -88259080 +12547 chr4 + 190214555 3029170 3029169 3029458 289 TTAATT-TCCATTTCCTGTATTTGTTATGTAGCACCTGAAGTTGTCAATAATGAAAAGTATACGTTTAGTCCCGATTGGTGGGGACTTGGCTGTCTGATCTATGAAATGATTCAGGGACATTCTCCATTCAAAAAATACAAAGAGAAAGTCAAATGGGAGGAGGTCGATCAAAGAATCAAGAATGATACCGAGGAGTATTCTGAGAAGTTTTCAGAGGATGCCAAATCTATCTGCAGGATGGTAAGTCAGGCTCTGTAGAGGCTGGGAAATGGCACTTCTCACTCATTCT chr4 - 94230402 8999672 8999671 8999961 85230442 85230441 85230731 290 TTAATTCTTGGTTTTTTGTTTATTCTTTTTAGCTCCAGAAGTGCTCAAAAATGAAAAATACACATTCAGCCCAGATTGGTGGGGTCTTGGTTGCTTAATTTATGAAATGATTGAAGGACAGTCACCATTCAGAAAGCATAAGGAAAGGGTCAAACGGGATGAGATTGACCGGAGAGTAAAGGAGGACCAAGAAACATATTCAGACAAGTTCTCTGAAGAGGCAAAATCCATTTGCAGGATGGTGGGTGAAGAGACGTAGAGGTTTGAAAATTAAATTTCTAATCCTTTTT ......-.:x:...::...x.x.x:.x.x....x..x.....xx....x........:..:..:..:..:..x...........x.....:..::.:..:............x.:.....x..x.......:...::.:..:..:.::......:....x...:.:..:.::...:.x...:.x..:xxx..::x:.....x..x.....:..x..:..x..x.....:..:...........::..x.:.xxx:.......:.x.:....x:x.:....x.::.x..:. 6M1I283M 201/289 69.6% 290/94230402 0.0% 1/289 0.3% -5970502 -88259900 +8438 chr4 + 190214555 3035380 3035379 3035529 150 TTGCAGTTACTCACCAAGAATCCAAGCAAGCGGCTGGGCTGCAGGGGCGAGGGAGCGGCTGGGGTGAAGCAGCACCCCGTGTTCAAGGACATCAACTTCAGGAGGCTGGAGGCAAACATGCTGGAGCCCCCTTTCTGTCCTGATGTAAGT chr4 - 94230402 9000694 9000693 9000843 85229560 85229559 85229709 150 TTGCAGTTACTTGCAAAAAATCCAGGGGAGCGACTGGGTTGCACGGAAAATGGAGCTGCTATTGTGAAACAACATCCTATTTTCAAGAATATTAACTTCAAGAGGCTGGAAGCTAACATGTTGGAGCCTCCATTTTTGCCAGATGTAAGT ...........::.x..:......:.x:....:.....:....x..:x:.x.....x...:xx.....:..:..:..::.x......:.:..:.......:.........:..x......:.......:..x..:.xx..x......... 150M 113/150 75.3% 150/94230402 0.0% 0/150 0.0% -5965314 -88265088 +8741 chr4 + 190214555 3037371 3037370 3037515 145 CAGCCTCATGCCGTTTACTGTAAGGACGTCCTGGATATCGAGCAGTTCTCGGTGGTGAAAGGGATCTACCTGGACACCGCAGATGAAGACTTCTATGCTCGGTTTGCTACCGGGTGTGTCTCCATCCCCTGGCAGAATGAGGTAC chr4 - 94230402 9001412 9001411 9001556 85228847 85228846 85228991 145 CAGCCACGTGCCGTGTATTGTAAAGATGTCCTGGACATAGAGCAGTTCTCTACAGTAAAAGGAGTGAACCTGGATACTACAGATGATGACTTCTATTCCAAATTTGTTACGGGTTGTGTCTCAATCCCTTGGCAAAATGAGGTAC .....x.:......x..:.....:..:........:..x...........x:::..:.....::.xx.......:..::.......x.........x.:x::....:...x..x........x.....:.....:.......... 145M 113/145 77.9% 145/94230402 0.0% 0/145 0.0% -5964041 -88266361 +5148 chr4 + 190214555 3038374 3038373 3038525 152 AGATGATCGAATCTGGGTGTTTCAAAGACATCAACAAAAGTGAAAGTGAGGAAGCTTTGCCATTAGATCTAGACAAGAACATACATACCCCGGTTTCC-AGACCAAACAGAGGCTTCTTCTATAGACTCTTCAGAAGAGGGGTAAAAAGACTT chr4 - 94230402 9002430 9002429 9002566 85227837 85227836 85227973 137 AGATGATTGAAACAGGATGTTTTGAAGATATTAATGCATGTGAAACTGATGGTACTGTGTCACCAGACAGAGAGA----------------GGTCTCCTAAACCAAAGAGAGGCTTCTTTCACAGACTTTTTAGTGGAGAGGTAAGGGTGCTT .......:...x.x..:.....::....:..:..::x.x......x...x.:x:..x..:..::...:xx...x.----------------...:...-.:......x...........::.:.....:..:..x:...:.....:::x:... 75M16D7M1I54M 95/136 69.9% 137/94230402 0.0% 17/136 12.5% -5964056 -88266346 +3004 chr4 + 190214555 3061966 3061965 3062015 50 GGCAAGACTCTATCTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAGA chr4 - 94230402 33658781 33658780 33658830 60571573 60571572 60571622 50 GGCAATATTATGTTGCAAATTAAAAAAAAAAAAAAGGAAAAGGAAAAGGA .....x.:.x.:.:x....................::....::....:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -30596815 -63633587 +4851 chr4 + 190214555 3074765 3074764 3074888 124 GAGCGGCGCCGCGAGTCGGCCCGAGGCCTCCGGGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTCCAGCAGCAGCAG chr4 - 94230402 9011891 9011890 9012002 85218401 85218400 85218512 112 gggcgggccggagcggcgggccggtgccgccggcg----------cgggcg--cAGCGGCGATGGCCACCATGGAGAAGCTGATGAAGGCCTTCGAGTCGCTGCGCTCCTTCCAGCAGCAGCAG .:....xx.x.x.x.x...x...:x...x....x.----------......--x::.x..x.....x...x....:.......................x..xx:x.................. 35M10D6M2D71M 87/112 77.7% 112/94230402 0.0% 12/112 10.7% -5937126 -88293276 +3027 chr4 + 190214555 3083556 3083555 3083602 47 CACACACACACACACACACACACACACACACATATATATGTATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x:.:..:...:..:........ 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -84289191 -9941211 +3942 chr4 + 190214555 3087926 3087925 3088008 83 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCATGTGCTACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.............x...x.xx.x........::............::....--.:..::.:...... 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -15109200 -79121202 +10313 chr4 + 190214555 3099245 3099244 3099402 158 TTGACAGTTTCTCTTCTTTTTTTGCTTAGAAATTCTCCAGAATTTCAGAAACTTCTGGGCATCGCTATGGAACTTTTTCTGCTGTGCAGTGATGACGCAGAGTCAGATGTCAGGATGGTGGCTGACGAATGCCTCAACAAAGTTATCAAAGTAAGAAC chr4 - 94230402 9017479 9017478 9017636 85212767 85212766 85212924 158 TTGTGATTTTCTAATATTTGTTTATTTAGAAATTCTCCAGAATTCCAGAAACTGCTGGGGATTGCTATGGAACTTTTTCTCCTCTGCAGTGAGGATGTAGAATCTGATGTCCGGATGGTTGCTGATGAATGCCTTAATAAAGTTATTAAAGTAAGAAC ...xx.x.....xx.x...x...::...................:........x.....x..:.................x..x........x..:.:...:..x......x.......x.....:........:..:........:........... 158M 132/158 83.5% 158/94230402 0.0% 0/158 0.0% -5918234 -88312168 +3148 chr4 + 190214555 3103300 3103299 3103378 79 CTGCAACCTCCGCCTCCCGGGTTCAAACTATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.:........::xx...x.xx.x........:..:.........:.:....--..:x...... 67M2D10M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -15093826 -79136576 +5823 chr4 + 190214555 3103809 3103808 3103901 93 TGTGATTTGTTGTAGGCTTTGATGGATTCTAATCTTCCAAGGTTACAGCTCGAGCTCTATAAGGAAATTAAAAAGGTGGGCCTTGCTTTTCTT chr4 - 94230402 9020533 9020532 9020625 85209778 85209777 85209870 93 TGTATTTTATTGCAGGCTTTGATGGATTCCAATCTACCTAGGTTACAATTAGAACTGTATAAGGAGATTAAAAAGGTGAGGTTTGCCTTCTTT ...:x...:...:................:.....x..x........::.x..:..x........:............:.x:....:..::.. 93M 74/93 79.6% 93/94230402 0.0% 0/93 0.0% -5916724 -88313678 +6524 chr4 + 190214555 3105343 3105342 3105443 101 TTGCACCCCCTC-AGAATGGTGCCCCTCGGAGTTTGCGTGCTGCCCTGTGGAGGTTTGCTGAGCTGGCTCACCTGGTTCGGCCTCAGAAATGCAGGTAAGTT chr4 - 94230402 9022062 9022061 9022163 85208240 85208239 85208341 102 TTGTACATTCTCTAGAATGGTGCTTCCCGAAGTCTTCGTGCTGCGCTCTGGAGATTTGCTGAGCTTGCTCATCTAGTTCGGCCTCAGAAATGCAGGTAAACT ...:..x::...-..........::.:..:...:.x........x..x.....:...........x.....:..:........................::. 12M1I89M 83/101 82.2% 102/94230402 0.0% 1/101 1.0% -5916719 -88313683 +8900 chr4 + 190214555 3107268 3107267 3107426 159 TTCTTTTGC-ATACACAGGCCTTACCTGGTGAACCTTCTGCCGTGCCTGACTCGAACAAGCAAGAGACCCGAAGAATCAGTCCAGGAGACCTTGGCTGCAGCTGTTCCCAAAATTATGGCTTCTTTTGGCAATTTTGCAAATGACAATGAAATTAAGGTA chr4 - 94230402 9022524 9022523 9022683 85207720 85207719 85207879 160 TTCCTTTGCCATTCTTAGACCATACTTAGTGAACCTTTTGCCCTGTTTAACAAGAATAAGTAAGAGGCCTGAAGAATCTGTACAAGAAACATTAGCTGCAGCAATACCAAAAATCATGGCAGCATTTGGCAATTTTGCAAACGACAATGAGATTAAGGTA ...:.....-..x.x:..:..x...:.:.........:....x..::.:..xx...:...:.....:..:........x..x..:..:..x..:........x:.x..x.....:.....xx.x.................:........:......... 9M1I150M 124/159 78.0% 160/94230402 0.0% 1/159 0.6% -5915256 -88315146 +3582 chr4 + 190214555 3111282 3111281 3111351 70 CTCCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGTGCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.::........::x...x.xx.x........:............:.:....--:.........::.. 54M2D14M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% -15085857 -79144545 +11973 chr4 + 190214555 3115290 3115289 3116269 980 TTTTGCTTCCGTAGGTTTTGTTAAAGGCCTTCATAGCGAACCTGAAGTCAAGCTCCCCCACCATTCGGCGGACAGCGGCTGGATCAGCAGTGAGCATCTGCCAGCACTCAAGAAGGACACAATATTTCTATAGTTGGCTACTAAATGTGCTCTTAGGTAAGGTGGAGGCATATGAGTGGAAGAGTCTCCAGCATGTACTCAAGATAGACCTTTGAAATAAATAAAACCAGATGATCCCTCAGCTTCTAGACCAGGCTA--TTTGGCACTGGTTGATTGAATGTGAACTG-CACTGGGGCTGCTGTGAGCCCGCATGGGTCTCTGTGACCCTGCAGATGCAGCCGTGCCCAGGGACTGGGCAGT-GGGTGTGGGCTGGTGTGAGCCCTGTCTGCCACCCAGGGCCTGGCCCTCTGTCTGTGTCGGCCATGACTATG--GTGAGTCTTGTAGGCTTGAGACTGTGCCTCGGGTTCCTGCGGGTTCTCTGTAGGTCAGTTGACAGTTTCTCCTGTTGTTTGGGTAACTGTGGAAACGAACACTGGCAAG-----TGCTGAAGCGAGCATGTGGACGTGCGATATGAAATAACGACCTGGCTTT-----CAAAGGCAGTGAGGCTCTC------TGGAAAGGACCTTGCTGAGCTAGGGATGTGGGTGTGTAGCCA-----TTCCCAGTGGGCCTCATGGC--------GTACTCGTTCATGATC--ATGTTTGTGCCATCTTGATCTCTCAGG--ATCTCTTCTTTTTTAACAGATTAAGCCGGGAATCTCCAAACAGTGAGTCA--GATGTTAAGATGTCTTGCTTCCACCCCCACAGGCTTACTCGTTCCTGTCGAGGATGAACACTCCACTCTGCTGATTCTTGGCGTGCTGCTCACCCTGAGGTATTTGGTGCCCTTGCTGCAGCAGCAGGTCAAGGACACAAGCCTGAAAGGCAGCTTCGGAGTGACAAGGAAAGAAATGGAAGTCTCTCCTTCTGCAGAGCAGCTTGTCCAGGTAGGA chr4 - 94230402 9022901 9022900 9023800 85206603 85206602 85207502 900 TCTTGTTTT--TAGGTCTTATTGAAGGCTTTTATAGCTAATCTTAAGTCCAGTTCCCCTACTATCCGTCGAACAGCTGCGGGATCAGCAGTAAGCATCTGTCAACATTCGCGAAGAACGCAGTATTTTTATGCCTGGTTATTGAATGTACTTTTAGGTAAGATTCAGG------AGGGGGGAAATT----ACATTTGCTTCAGGTA-----------TAGGTAATGTGAAAT----TCTTTTCTCATGTAACACGCTAAACATGATAGTGGTTTTCAGGCAAAGAAAGGATATTTAGACTA-------------------TCAGTTACACTGCTAATGC-----TTTCTTTATATTGTGTTGTTGGGCCTATGCAGATAGTAATGTTATTTA------------TATCTCTCTGTGTGTGG-------AATTATGAAGTCAGTAATGTTGAAAAGAAACAG---CCCAAGCCA----GGGAAGCAAGTAGCCCATTGGAAAAT--------------GAGGAGGTGTGGG---GATTGTTGTCAAAGGTCTTGCACAAGAGTCTTTGAAGACTTT---TATTGTTTAGCAGCCTGATTTTTAGTGCGAAAGGTCTGAGGTTCTGGTACAGTCATAAGGTTCTTTC----------------ATATGTAGACTGCATTTTTCAAGTATTTCT-ACGGTTAAAAAAAAAAATCTTTAGTTGTTGGATGGTGGTGTGATCTTTTTGTCTTAGAGAAACTATTATATGGGTACACAAAAAATCATGTAT------GAAGTTAACCATTGCCAGTAAGTTTTTTCTCTTCTTACCCC-CAGGCTTGTTGGTTCCTGTAGAAGATGATCATCCTACACTTTTAATTCTGGGTGTTTTACTTACACTAAGGTATCTCATACCTTTATTGCAACAGCAAGTGAAGGATACCAGCCTGAAAGGCAGTTTTGGTGTAACAAGGAAAGAAACAGAGATTTCACCTTCACCAGAACAGCTTATACAGGTAAAA .:...:..:--.....:..:..:.....:..:.....x..:..x.....x..:.....:..:..:..x..:.....x..x...........:........:..:..:..:x....:..:..:.....:...:x:...:..:.:.....:..:.........:.xx...------..x..:::.:.:----:...x.:..:x..:..-----------..::...x::x.:..----:..:xx..:x.:x.x..x....--:x..::.x.....xx:x.:xx:x...xx.-:.:.x:.:..:-------------------..x..x..x....x:....-----.x:.:xx:x.:..x.:x..-...:x.:x..x.:.:xx.::x:.:.:.:------------.:x.:......x....x-------:.:....--..x...xx...x.:xxx..:..x.---.:.::.::x----...xxx:xx....x:..x.x..x.:.--------------.:.x.:x.....:---..x:::..x...:-----...xx...x.xx:x..x:...x.x---...x:xx..:.::....::...-----.:..:.xxx.....:...x------.x:x....x:...x.----------------:.:.....x.x-----..:.x...:xx:..-.:..:--------:x.x..x..x:.x:.:--...x.x...:x.....xx.x...:..:--.x..x..x.x.xxxx...x.xx..::.:x.x..------:x...x.::..--.x::x....x.x.:.:x....:xx....-.......::.x........x..:.....x..::.:..x..x:.:.....x..:..x:.:..:..x..:......:.x:.:..:..::....:.....:..x.....:..x..............:..:..x..:.............::..::.:..x.....xx....:......:.x......::. 9M2D157M6D12M4D16M11D15M4D22M2I29M1I11M19D19M5D19M1I28M12D17M7D7M2I24M3D9M4D26M14D13M3D13M5I24M3D22M5I19M6I15M16D11M5I14M1D5M8I16M2I27M2I33M6D11M2I28M1D188M 543/859 63.2% 900/94230402 0.0% 162/859 18.9% -5907611 -88322791 +11325 chr4 + 190214555 3121204 3121203 3121441 238 ACACCTGTGTTTCTCTGTTTCT-AGGTTTATGAACTGACGTTACATCATACACAGCACCAAGACCACAATGTTGTGACCGGAGCCCTGGAGCTGTTGCAGCAGCTCTTCAGAACGCCTCCACCCGAGCTTCTGCAAACCCTGACCGCAGTCGGGGGCATTGGGCAGCTCACCGCTGCTAAGGAGGAGTCTGGTGGCCGAAGCCGTAGTGGGAGTATTGTGGAACTTATAGGCAAGTTAT chr4 - 94230402 9024262 9024261 9024500 85205903 85205902 85206141 239 ACTCCAGTACTTTGTTGTTTTTCAGGTTTATGAGTTGACTCTGCATTACACTCAGCATCAGGACCATAATGTTGTGACTGGGGCTTTGGAATTACTACAACAGCTCTTTAGAACACCGCCACCTGAACTTCTCCATGCCTTGACTTCTTTAGGTGGCATTGCACAGGTCAGTGTATCCAAAGATGAATCTGCCATCAGGAGCCGCAGTGGGAGCATAGTGGAGCTCATAGGTAAGATGT ..x..x..::..:x:.....:.-..........::....x:.:...:.:..x.....:..:.....:...........:..:..::....::.::.:..:........:.....:..x.....:..:.....x..x:..:....:x.xx.x..x.......x:...x...x:.:xx.:..:..x..:....x::x.x.:.....:........:..x.....:..:.....:...x.:. 22M1I216M 168/238 70.6% 239/94230402 0.0% 1/238 0.4% -5903058 -88327344 +7869 chr4 + 190214555 3122786 3122785 3122993 208 TTTTCTCTAGTTTTAAAGTTGAATCAAGCT----GTTTGAAGATTTTCACATTTCTTCTAGATTTTATCAGCT-----TGTTACTTTATCTGTCACTTTCTGTGATTTGCAGCTGGAGGGGGTTCCTCATGCAGCCCTGTCCTTTCAAGAAAACAAAAAGGTGATTATTTCAGAAATCAGAGTCTTGTGTTGAAT--CTTACTGATTTTCTTGTATTTC chr4 - 94230402 9025228 9025227 9025441 85204962 85204961 85205175 214 TTTTTCCTGGCTTTGTATTTTCTTTTAACTTCCCATCTGTGGCTGTTAGAATTCCTTCATGATTGCAGCAACTCTCTCTTTGCCCTGATATGTTACTTTCTGTGATTTGCAGCTGGAGGGGGTTCTTCATGCAGCCCTGTTCTTGCGAGAAAGCATAAAGGTGATTATTTCCAAAATCAAATTTTTA-ATTGCATTCCTCTCTGATTTT----TATTTC ....::..:.:...:x.x..xxx.:x.:..----:.:..x:.x.x..x:x...:....xx....x:.x..:..-----.x.xx.:.x..x...:...............................:..............:...x.:.....:..x...............x:......:.x.:..:-:...x..--..:x........----...... 30M4I39M5I109M1D7M2I12M4D6M 151/203 74.4% 214/94230402 0.0% 16/203 7.9% -5902442 -88327960 +18977 chr4 + 190214555 3127253 3127252 3127620 368 TCTGTCTT-CAGCCTCAGTGAAGGATGAGATCAGTGGAGAGCTGGCTGCTTCTTCAGGGGTTTCCACTCCAGGGTCAGCAGGT------------------------CATGACATCATCACAGAACAGCCACGGTCACAGCACACACTGCAGGCGGACTCAGTGGATCTGGCCAGCTGTGACTTGACAAGCTCTGCCACTGATGGGGATGAGGAGGATATCTTGAGCCACAGCTCCAGCCAGGTCAGCGCCGTCCCATCTGACCCTGCCATGGACCTGAATGATGGGACCCAGGCCTCGTCGCCCATCAGCGACAGCTCCCAGACCACCACCGAAGGGCCTGATTCAGCTGTTACCCCTTCAGACAGTTCTGAAATTGTAAGTGGGCAGAGGG chr4 - 94230402 9028963 9028962 9029355 85201048 85201047 85201440 393 TCTGTTTTGCAGCTTCTGTGAAAGGCGAGATAACCAGTGAACTAGCTTCTTCATCGGGTGTATCAACAGCTGGGTCAGTAGGGAGTTCAGCTGCTGATCCTACCGGACACGATATCATTACTGAACAGCCACGTTCTCAACATACGTTGCAGTCAGACTCTGTAGATCTGTCAAGCTGTGATTTGACAAGTACAGCTACTGAAGGGGAAGACGATGATGTGCTTAGTCGAAGCTCTAGCCAGATCAGTGCTGTCCAATCAGATCCCACTATGGACTTGAATGATGGTACACAGGCTTCCTCACCAATTAGTGATAGCTCTCAGACTACTACTGAAGGTCCAGACTCTGCTGTAACCCCTTCGGACAGTTCTGAAATTGTAAGTGTGCAGCGGG .....:..-....:..x.....:.::.....x.x::.x..:..:...x....x..:..x..x..x..xx.x.......:...x------------------------..:..:.....:..x...........x..x..:..:..::.....x.:.....x..:......x.x........:........:x.x..:.....x.....x..x..x...:.x:.x..:.:x.....:......:....:..:....x...x..:..::.:......:..........x..x.....:..x..:..x..:..:..:.....:.....:..:..:.....x..x..:..x.....x........:......................x....x... 8M1I74M24I286M 280/368 76.1% 393/94230402 0.0% 25/368 6.8% -5901710 -88328692 +11316 chr4 + 190214555 3129911 3129910 3130431 521 TTGAACCGTTTAGGTGTTAGACGGTACCGACAACCAGTATTTGGGCCTGCAGATTGGACAGCCCCAGGATGAAGATGAGGAAGCCACAGGTATTCTTCCTGATGAAGCCTCGGAGGCCTTCAGGAACTCTTCCATGGGTATGTGGACTACAGGTGATGCGCTACAAAGTGGTTTGTA-----TTCAGACCTGGACATCTTAATTATATCTTTGCTTCCAAGAAG----AAGTCCTTTGATACTGTTTTCTGAGTTCTGAATAGCT-GATGAAAATGACCAATTGAGG-----AATAATCATACTTTTTCT---------TGATCTAAATCTTATACTTTTGAGTTATCTT-AGCATAAATGTATAATTGTATTTTAAGTGGAAATTTGTCACTTAATCTTGATTTCTCTGTTTTTAAAGCCCTTCAACAGGCACATTTATTGAAAAACATGAGTCACTGCAGGCAGCCTTCTGACAGCAGTGTTGATAAATTTGTGTTGAGAGATGAAGCTACTGAACCGGGTGATCAAGAAAACAAGGTGAGGGA chr4 - 94230402 9031129 9031128 9031657 85198746 85198745 85199274 529 TTATACTCTGTAGGTTTTGGAGGGTGCTGAAGGACAGTATTCTGGAATGCAAATTGGACAGCTGCAGGATGAGGAAGATGAAGCTGCAAATATTCTCCAGGATGATTCATCAGAGTCTTTCAGGAGTTCT---ATTGGTATGCTGAT---AAATAAAGGGGAAAAAAAAAGATAGAAACACCTTTAGGG-TAGATATTACAAGTGAATCTGCTGATTTTGGAGGTTGAAGGCTCACTGAAATGAATGT--GAAAAATGAACAACTAGATCAAAATGAACTTTAAATGCTTCTAATGACTA-ACTTGTTTTGATCATTGCTAATTTATTTTTCATGTTTTATAATTAAGTTCAATCCAAGTGC----TTTTAATTTGCATGTAAAATGGT-ATTTAAT--GAATTGCCCTTTTTCTAAAGCTCTTCAGCAGCCTCACCTGTTGAAAACCATGAGCCATAGTAGGCAGCCTTCTGATAGCAGCGTTGACAGATTTCCATCAAAAGAAGATGCAGTGGAACCTATTGATCATGAAAATAAGGTGAGAAA ..:x..:x.x.....x..:..x...:.:..x::x.......:x..xx....:..........:x........:..x..x.....::..::......:.xx.....xx.x..:...x.:.......::...---..x......:x..:---.::.:.x.x.xx.x...:x:.x.x.x.-----..:..:x-.:..:..:x:..x.:x....x:xxx.::x:..:.----.:.::.x:...x.:x:x.x.--..:xxx....:.:..-...x.......x.xx.x:.x.-----...:.::.-....x..:.---------.:..:..xx.:.:..::...xx.:...xx..-.::x:..:..:----..x..x...:x:..x...x.x..-.:.....--x:...x.:..x...:......:.....:...x.x..::.:.......x......:..:x.:..............:.....:.....:.:....x::.::.:...x..x..x::x.....x:x......x.....:........::. 130M3D14M3D27M5I7M1D34M4I20M2D15M1I21M5I8M1D9M9I31M1I11M4D23M1D7M2D147M 328/504 65.1% 529/94230402 0.0% 42/504 8.3% -5901218 -88329184 +8779 chr4 + 190214555 3131629 3131628 3131801 173 TCTTGGCAGTGCTGGTTCCGGACAGGGATGTGAGGGTCAGCGTGAAGGCCCTGGCCCTCAGCTGTGTGGGAGCAGCTGTGGCCCTCCACCCGGAATCTTTCTTCAGCAAACTCTATAAAGTTCCTCTTGACACCACG---GAATACCCTGGTATGTTAAAAGTTCACATCTTATTT chr4 - 94230402 9033942 9033941 9034116 85196287 85196286 85196461 175 TTTTACTAGCTTTAGTTCCAGATAGAGATGTGAGAGTCAGTGTAAAAGCCCTGGCAGTAAGTTGTGTTGGAGCAGCTGTTGCCCTTCATCCTGAGTCTTTCTTCAGCAAATTGTATAAAATGCCCCTTGAAGCAATGGGAGAAGACTATGGTATGTT-GTAGTTCAGATCTTTTTT .:..:x:..:x:.:.....:..:..:........:.....:..:..:........xx.x..:.....x...........x.....:..:..x..:...............:.x......:.x..:.....x:.x.:.---...x..:x.........-:x......x.....x... 137M3I17M1D18M 131/172 76.2% 175/94230402 0.0% 4/172 2.3% -5902313 -88328089 +15111 chr4 + 190214555 3132545 3132544 3132921 377 GCAATTTATCTCCACAGAGGAACAGTATGTCTCAGACATCTTGAACTACATCGATCATGGAGACCCACAGGTTCGAGGAGCCACTGCCATTCTCTGTGGGACCCTCATCTGCTCCATCCTCAGCAGGTCCCGCTTCCACGTGGGAGATTGGATGGGCACCATTAGAACCCTCACAGGTAACGGCCAGTTTTTCAGCTGTGTTTTTTCTAGTTATGCTTACTAAGGTTTAAGTTTAGATGATGATGTTTGTTGCTTGTTCTTCTGGTTAGGAAATACATTTTCTTTGGCGGATTGCATTCCTTTGCTGCGGAAAACACTGAAGGATGAGTCTTCTGTTACTTGCAAGTTAGCTTGTACAGCTGTGAGGGTGAGCATAA chr4 - 94230402 9035080 9035079 9035448 85194955 85194954 85195323 369 GTAACTTGTTTTCCTAGAGGAGCAGTATGTATCAGATATTCTGAACTACATTGACCATGGAGATCCCCAGATTAGAGGAGCTACTGCTATTCTATGTGGAACAATCATCAATTCTATTCTACTTAAATCACGTTTTGATGTGGAGAAATGGCTAGTAAATGTCAGAAGCTCAACAGGTAACAATT-TTTTTTAAAGTGTATCTCTTCT--TTTCTGTAGCCAAAACATCCTTCTGTTTCATTATTCTGAATTCT-----TTTTTGTTAGGAAATCTCTTTTCCTTGGTAGACTGCATACCTCTATTGCAGAAAACACTGAAAGATGAGTCCTCTGTTACATGCAAACTGGCTTGTACAGCTGTGAGGGTAAGCAGAA .:..:..:.:.:.x:......:........x.....:..::..........:..:........:..x...:..x.......:.....:.....x.....:..xx.....x::..:..:..xxx:.::..x..:..:x.:....:::.x...x.:.xx.x::.:....x.::x.........::::-x.....x.:x...:.:.:....--..x:xx.x:.:..:::x.xxx.:.:xx.x..x..x:.x:x.x..-----..:.x..........x:x.....:....::..:.....x...:.::...:............:........:........x.....::.:....................:....x.. 185M1D22M2D44M5D118M 254/369 68.8% 369/94230402 0.0% 8/369 2.2% -5902535 -88327867 +8145 chr4 + 190214555 3134395 3134394 3134547 153 TTCCAGAACTGTGTCATGAGTCTCTGCAGCAGCAGCTACAGTGAGTTAGGACTGCAGCTGATCATCGATGTGCTGACTCTGAGGAACAGTTCCTATTGGCTGGTGAGGACAGAGCTTCTGGAAACCCTTGCAGAGATTGACTTCAGGTAAGTG chr4 - 94230402 9036938 9036937 9037090 85193313 85193312 85193465 153 TTTTAGCATTGCATCATGAGCTTGTGTAGTAGCAGTTATAGTGAACTAGGTTTACAATTAATTGTTGACCTCCTTACGCTGAAGAATAGCTCATACTGGCTAGTGAGGACAGAACTTCTGGAAACACTTGCGGAGGTGGATTTTCGGTAAGTG ..::..x.:..::.......::.x..:..:.....:..:.....::....x:.:..::.:..::.:..:x.x..x..x....:...:..:..x..:.....:...........:...........x.....:...:.x..:..:x........ 153M 110/153 71.9% 153/94230402 0.0% 0/153 0.0% -5902543 -88327859 +7995 chr4 + 190214555 3135871 3135870 3136330 460 ATGATTTCATTGTTAAATGTGCTCTTTTGTTAGGCTGGTGAGCTTTTTGGAGGCAAAAGCAGAAAACTTACACAGAGGGGCTCATCATTATACAGGGGTAAGCGGTTTATT---TTTGTGAGATGCTGTTTTACCTTCAAGA---AGGTGAAAGTGAGGCTTTCCTTGTGGAATTTC-----------------------TCTAAATGCATTCGTCATGTTTTA-GATGTT-------------TATTTCACAGTTTATATCATG--------------------------------------------AAAGTTATAATCTTGTCATATGGATTTAAGTCTAGTAAT-------------GTTGAGT--------TCTTTCTCA--CTAGCTTTCCAAAA--------TATCTTACCTAAAATTTAGTCAAAT----ACAAGATTATGTTTATTTT--TATTATCCTTCTCTCTAAAGCTTTTAAAACTGCAAGAACGAGTGCTCAATAATGTTGTCATCCATTTGCTTGGAGATGAAGACCCCAGGGTGCGACATGTTGCCGCAGCATCACTAATTAGGTAT chr4 - 94230402 9037579 9037578 9038157 85192246 85192245 85192824 579 ATTAATCTATCTTTAATTGT-TTTTTATCATAGGCTAGTCAGCTTTTTGGAAGGAAAAACTGACAGCTTGCACAGAGGTGTTCATCATTATACTGGTGTAAGTAAATTATTCAATCAGTG-TATTTTGTTTCTTGATTAAAATACCAGTGAAATTTTGGTACTTCATGTTTAAATTTGGTCAACACTGATAGATAAATGTTTTGTATGCATTAGACTCCTTTTCTGATGCTACAGTTGGAAAGATACTGTACTACTTAGATACTGTTATCTTCGTGTTCTGTGATCTGTTTGTGGTTTTGCTTGTTTTTAAAGTTAAAAACCTTTC---TGCATTTCTGTATTTTAATAGTATTTTTTGCAGTTTAGTGTAAAGATTATTTCACAGACTTGGATGACAAATCTTGCTGTTACTCTTCCAACATTCTGGTCAAATGATGAAGGAGTTCAACTTACTTCAGTATACTAATTTATTTTATAGCTACTAAAAATTCAGGAGAGGGTGCTCAACGATGTTGTTATCTGTTTGCTTGGAGATGAAGATCCAAGAGTACGACATGTTGCTGCAGCTTCATTAATGAGGTAT ..x.x.::..:x....x...-:.:..x.xx......:..x...........:.x....:.x..x.:...:........x.:............x..x.....:::x.....---.:x...-x..x:.....:x:xx.:..:.---x:......x.xx..:x:.:.x...xx..x..:-----------------------.:.:x.......x.x.x:x....x-....:.-------------..:.x:..x::...x..xx..--------------------------------------------.......x..x.:.x..---..x....xx..x.xx....-------------...x...--------.x....x..--..x.xx.xx....x--------..:::.x..x.x.x.:.:.......----.x::::..xx::...:..:--...xx.xx..:x:.:..x....x:.....x.x..:..:x.:........::.......:...::..................:..x..:..:...........:.....x...:....x...... 20M1D90M3I6M1D21M3I32M23I24M1I6M13I21M44I17M3D19M13I7M8I9M2I14M8I25M4I19M2I125M 312/455 68.6% 579/94230402 0.0% 129/455 28.4% -5901708 -88328694 +11171 chr4 + 190214555 3140508 3140507 3140664 157 AGGCTTGTCCCAAAGCTGTTTTATAAATGTGACCAAGGACAAGCTGATCCAGTAGTGGCCGTGGCAAGAGATCAAAGCAGTGTTTACCTGAAACTTCTCATGCATGAGACGCAGCCTCCATCTCATTTCTCCGTCAGCACAATAACCAGGTATGCTG chr4 - 94230402 9038907 9038906 9039063 85191340 85191339 85191496 157 AGGCTTGTTCCAAAGCTGTTTTATAACTGTGATCAAGGACAAGCTGATCCAGTTGTGGCAGTAGCAAGAGACCAAAGCGGCGTCTACCTGAAACTACTAATGCATGAAACACAGCCTCCATCTCACTTTGCAGTGAGCACTATCACTAGGTATGTTG ........:.................x.....:....................x.....x..:........:......:.:..:...........x..x........:..:..............:..:x.x..x.....x..x..:.......:.. 157M 134/157 85.4% 157/94230402 0.0% 0/157 0.0% -5898399 -88332003 +7967 chr4 + 190214555 3142675 3142674 3142898 224 AATCTTTAATCTTAAACTTTTAAATGCCAT--TTGATCTTTAAAAATATATGTTT------TAATAGTGTATTTTAAGTCTCTA--TATTTTTGTTATTAGAATATATAGAGGCTATAACCTACTACCAAGCATAACAGACGTCACTATGGAAAATAACCTTTCAAGAGTTATTGCAGCAGTTTCTCATGAACTAATCACATCAACCACCAGAGCACTCACAGTAAGTCTCTTT chr4 - 94230402 9039920 9039919 9040147 85190256 85190255 85190483 228 AATCTGTAATGGTA---TCTTAA--GCCATGATCATTTTTTATTAAGGTATGTTTGAGCTTTAATTAAGTGCTTTAGTACAATAAATATTTTTATT-TCAGAACATATAGAGGTTACAATATGCTGCAAAATCCAACGGATGTCACTATGGAAAACAATCTTTCAAGGGTTGTTGCTGCAATTTCCCACGCATTGACAATATCCACTACAAGATCACTTACAGTGAGTTTTCTT .....x....xx..---.:....--.....--.::x.:....xx..x:.......------....x:x..::....:xx.xx..--.......:..-.:....:.........:..:..:x.:..:.x..::x:...:..:..............:..:........:...:....x...:....:..:.x.:.:.:x.:...x..:..x...x....:.....:...:.::.. 14M3D6M2D5M2I23M6I23M2I10M1D137M 157/218 72.0% 228/94230402 0.0% 16/218 7.3% -5897245 -88333157 +7048 chr4 + 190214555 3145134 3145133 3145252 119 TTGTTTCTTTCTTCTCAGTTTGGATGCTGTGAAGCTTTGTGTCTTCTTTCCACTGCCTTCCCAGTTTGCATTTGGAGTTTAGGTTGGCACTGTGGGTATGTATTTTCCTCAGTATATAT chr4 - 94230402 9040308 9040307 9040426 85189977 85189976 85190095 119 TTGGTTTTGACTTTTCAGTTTGGCTGCTGTGAAGCTTTGTGTCTTCTCTCCACAACCTTTCCAGTCTGCACCTGGACTGTGGGATGGCACTGTGGGTATGTTCTTCATCCAATATTCAT ...x..:.xx...:.........x.......................:.....x:....:.....:....::....x.x.:..x.................x:..:x::..:...x:.. 119M 93/119 78.2% 119/94230402 0.0% 0/119 0.0% -5895174 -88335228 +9200 chr4 + 190214555 3146772 3146771 3146951 180 TGACTTTGCAAATGTCTGCTTCCAGAGTGCCTCCACTGAGTGCCTCAGATGAGTCTAGGAAGAGCTGTACCGTTGGGATGGCCACAATGATTCTGACCCTGCTCTCGTCAGCTTGGTTCCCATTGGATCTCTCAGCCCATCAAGATGCTTTGATTTTGGCCGGAAACTTGCTTGCAGGTA chr4 - 94230402 9043049 9043048 9043228 85187175 85187174 85187354 180 TGACATTCTAAAATTGTACCTCTAGCGTTTCCCAGCCAAGTCCTTCAGATGATGCTCAGAAGGGCTGCACTATTGGAATGGCCGGCATGGTCCTCTCTCTTCTTTCATCAACATGGTTCCCTTTGGACCTTTCTGCTCATCAGGATGCTTTGATTTTGACTGGAAACTTGCTTGCAGGTA ....x..x:...xx.x.:.:..:..x..x:.:.x:.::...x.:........xx..x:....:....:..::....:......:xx...:.:..xx.:..x..:..:...:.x........x.....:..:..x..:.....:...............:.:................... 180M 131/180 72.8% 180/94230402 0.0% 0/180 0.0% -5896277 -88334125 +10725 chr4 + 190214555 3147997 3147996 3148210 214 TATCACAGCCAGTGCTCCCAAATCTCTGAGAAGTTCATGGGCCTCTGAAGAAGAAGCCAACCCAGCAGCCACCAAGCAAGAGGAGGTCTGGCCAGCCCTGGGGGACCGGGCCCTGGTGCCCATGGTGGAGCAGCTCTTCTCTCACCTGCTGAAGGTGATTAACATTTGTGCCCACGTCCTGGATGACGTGGCTCCTGGACCCGCAATAAAGGTA chr4 - 94230402 9044967 9044966 9045180 85185223 85185222 85185436 214 TGTTACAGCGAGTGCTCCCAAGTGTTTAAAGAACCCTTGGAGTGCTGAAGAAGATTCAAACCAAGTTGCTGCAAAGCAGGAGGAACCGTGGCCAGCTCTGGCAGACCGAACTCTTGTTACTTTGGTAGAACAGCTCTTTTCTCATCTGCTTAAGGTCATTAATATTTGTGCACATGTAATGGATGATGTTGCCCCTGGCCCAGCAGTAAAGGTA .:.:.....x...........:.x.:.:.::.:::.x...:x:x..........xx.x....x..:x..::.x.....:.....:x:x........:....x:.....::.:..x..xx.:x....:..:........:.....:.....x.....x.....:........x..:..xx.......:..x..:.....x..x...:........ 214M 155/214 72.4% 214/94230402 0.0% 0/214 0.0% -5896970 -88333432 +3034 chr4 + 190214555 3154251 3154250 3154285 35 GTTTTTGTTTTTTTGTTTTTTGTTTTTGTTTTTCT chr4 - 94230402 84067050 84067049 84067084 10163319 10163318 10163353 35 GTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTCT ..........x........................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -80912799 -13317603 +8895 chr4 + 190214555 3154272 3154271 3154499 228 GTTTTTGTTTTTCTATTTTAGGCAGCCTTGCCTTCTCTAACAAACCCCCCTTCTCTAAGTCCCATCCGACGAAAGGGGAAGGAGAAAGAACCAGGAGAACAAGCATCTGTACCGTTGAGTCCCAAGAAAGGCAGTGAGGCCAGTGCAGGTA-----GGAAACAGCGTGGGGAAGG-----GAGGGACATGAGTGCAGCATCTGTCATGTAGAAACATAGGATTTAAGTAACTTGGTGT chr4 - 94230402 9045859 9045858 9046089 85184314 85184313 85184544 231 GCTTTTTTTTTTAAATTCTAGGCAGCATTACCTTCTCTCACAAACCCACCTTCTCTTAGTCCAATTCGGAGGAAGGGGAAAGAGAGGGAGCCTGTAGAGCAGACTTCTGTGCCAATGAGCCCTAAAAAAGGTGGTGAAACTAGTCCAGGTAGGCATGGAGACATTAGGTGAGAGGCTTAATAGGCGTGTGGGTACAGCA--TAGAGAGTAGAAAT-----AATTGAGTAGCTTGTTAT .:....x.....xx...:........x..:........x........x........x.....x..:..:x.:........:....::..:..x.x...:..::.x.....:..:x....:..:..:.....::....::.:...x......-----...:...x::x.x.::...-----x...x:::..:..:.....--.:xx:x.......:-----.x..:....:....x.:. 151M5I19M5I19M2D14M5D18M 158/221 71.5% 231/94230402 0.0% 17/221 7.7% -5891587 -88338815 +8026 chr4 + 190214555 3157060 3157059 3157202 143 ATATTTTTAAAGCTTCTAGACAATCTGATACCTCAGGTCCTGTTACAACAAGTAAATCCTCATCACTGGGGAGTTTCTATCATCTTCCTTCATACCTCAAACTGCATGATGTCCTGAAAGCTACACACGCTAACTACAAGGTA chr4 - 94230402 9046450 9046449 9046591 85183812 85183811 85183953 142 atatttttaa-GCTACTAGGCAAACTGATGCTAGTGGTCCTGCTCCAACAAGTAAATCATCTTCAGTAGGAAGCTTTTATCATCTTCCATCATATCTGAAGTTATACGATGTCTTGAAAGCAACCCATGCTAACTATAAGGTA ..........-...x....:...x.....:.:xxx.......:.x.............x..x...x.:..:..:..:...........x.....:..x..::.::.:......:.......x..x..:........:...... 10M1D132M 112/142 78.9% 142/94230402 0.0% 1/142 0.7% -5889390 -88341012 +6279 chr4 + 190214555 3160280 3160279 3160421 142 AGGTCACGCTGGATCTTCAGAACAGCACGGAAAAGTTTGGAGGGTTTCTCCGCTCAGCCTTGGATGTTCTTTCTCAGATACTAGAGCTGGCCACACTGCAGGACATTGGGAAGGTTTGTGTCTTGTTT--TTTCTCCTTGGGTT chr4 - 94230402 9047371 9047370 9047514 85182889 85182888 85183032 144 AGGTTACTTTGGATCTCCAGAACAGTAATGAAAAGTTTGGATGCTTCTTACGGTCTGCCTTAGATGTTCTGTCGCAAATCTTGGAACTTGCAACTCTTCAAGACATTGGAAAGGTACAAGATGCGTTTGGTTTCTGTTTGTGTT ....:..x:.......:........:.xx............x.x..::.x..x..x.....:........x..x..:..x:.:..:..x..x..x..x..:........:.....x::x.x:x:....--.....x:...x... 128M2I14M 103/142 72.5% 144/94230402 0.0% 2/142 1.4% -5887091 -88343311 +3397 chr4 + 190214555 3171566 3171565 3171635 70 CTCCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGTGCGCCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:x........:.x...x.xx.x........:............:.:....--:....:....:::. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% -15025573 -79204829 +12987 chr4 + 190214555 3172309 3172308 3173135 827 TCTTTCTACAGTGTGTTGAAGAGATCCTAGGATACCTGAAATCCTGCTTTAGTCGAGAACCAATGATGGCAACTGTTTGTGTTCAACAAGTAAGAGCTTCATTCTTTTCCTCTTCTG----TTAA---GACGTTC-GGGTATGACAGCAAAACGCTG----------CTACTCCTTAAGAGGCAGGCGCTGTTGGCA-----TAATCAGCTGGGAGGATTGTGGGGTCCAGCGCAGCA----------CTTTTTGGCTCAGTCCA-----------TGATTGA--GCCAAGAGGCCA----TCCTTCCCTTCACTCCCCAGGAGGACGAGGTCTGTCACTG--------------------TGGAGGGCAGAGGAC-------ACCAGAAGCTCCT-----CTGCAACCTCGCTAGTTAACTTCCAGTCCCT----CGGAGTTT------------------------CTGTTTAGAATGCTCA-ATC-TCATTTAGAATTGCAAGGAAA-----CCCAAAACGCCTAT---TTAAGGTACAAACAGCACTTCATACAATATCTCA------------------TGAGGTATTAATA-GTGATTCACAGGAAGAATTTCACGCTGTGAGTCTTTGCTAACATATCC-----AGTTATTTACAGAT----GGATTTGATATTTGTGTGGGAGATTCTTAAAAGTGTTGTTCACGCCACATTGTTGATGCCTCATTTTTTTCACTGTAGTTGTTGAAGACTCTCTTTGGCACAAACTTGGCCTCCCAGTTTGATGGCTTATCTTCCAACCCCAGCAAGTCACAAGGCCGAGCACAGCGCCTTGGCTCCTCCAGTGTGAGGCCAGGCTTGTACCACTACTGCTTCATGGCCCCGTACACCCACTTCACCCAGGCCCTCGCTGACGCCAGCCTGAGGAACATGGTGCAGGCGGAGCAGGAGAACGACACCTCGGGGTAA chr4 - 94230402 9047979 9047978 9048915 85181488 85181487 85182424 937 TTTTTTTTTAGTGTGTGGAAGAAATCCTGGGATATCTAAAATCATGTTTCAACAGAGAACCAACAATGGCAACAGTTTGTGTACAGCAGGTAAGGCGGTAACTTTTTGGTTACTATAAGGCTTAACCTGATGTCCTGTGCATGTCAACTGGATTCTGATTATGGCCCCTCATACTTTCTGGGTAGGCAGTGTGAGGAAACTTTCATCAACTGTTCTGAAACTTGATACCATCTGAATAGCTTAGTTTCCTCTTGAACTGTTTCCAATTCGAATATCTTATTAAATGCTAAGAAAATAAGCCTTGTTTCCTACCTTCCCAA-----ATGTGTTCTGTAGCCATTTAACTATATCAAAGGACCTGGAAAGCAAAGAACTGTCTTAATGATAGATTTCTATAAGTTTCCAGCTGAGCACCTGAGCTCTAGTCACCACAGTGTAATTTTGGTGGGAAGTGAGCTTCAGTAGACTGTTTTAAATTGTCACATCATTGTTT----TCGCAAGTGAAATGTTTCCATATCTTTTTTGGGCTGAGATGTAGATTG--TTTCATTAATTCTCCCAGCCTTTTTTTCTGTTGTCTCATATTTGACTACATGATCCACAG-------TTTGCGCTTCCAGTTTGTGATGATCTTCCCTCTGTAGTTCTTTGGGAGGGTGAGGATTCAAGTTTTGTGTGG-----TCCTAAAA------------TGATATTTTT--TTCCCTGTTTTTTTT-CTCTAGTTATTGAAAACATTATTTGGGACAAATCTGGCTTCTCAGTATGATGGCTTGTCTTCAAACACCAGCAAAGCTCAAGGAAAAGCTCAACGCTTAGGTTCTTCCAATTTGAGACCTGGTCTCTATCATTATTGCTTCATGGCACCATATACACATTTTACACAGGCACTTGCTGATGCAAGTCTAAGGAATATGGTTCAGGCTGAGCAAGAACACGATGCTTCAGGGTAA .:...:.x:.......x.....:.....:.....:..:.....x..:..:.::x.........::........x........x..:..:.....:xxx.x.:.:...xx:.x:.x.:----....---..:..:.-.x.:...x..:.x::.:x...----------..xx.x...xxx:..:....:x...x:.x.-----.x....:...xxxx..xxx.x.:xx...x.xx.::.----------..:..x::..xxx....-----------.x...:.--..:....::x:.----.:x..:...x.x:....x.-----.:.x.x.....x:.::--------------------....::...:..:..-------.:x.x.:::.:..-----:.x.x.x..x:x:.x:.:.x:..:....x.:----:.x.:...------------------------......x:...xx...-...-.::...----.:.....x:..-----:...x.x.x::.x.---:.:..:.::.:.:x.--:.....xx.x.x..:..------------------.x.x:.x.x.x..-:....:.....-------..::....x:x...:.x..x.:.:x.x:..-----....x...:x:::x----.....::.xx.........-----..:.....------------:x.:...x..--.x..:::.......:-..x.....:.....:..x:.x.....x.....::....:..:....x.........:.....x...x.......:x.x.....xx:...x..:...:.x..:..:....:.x....:..x..::.x..:..:..:...........x..:..:..x..:..:..x.....x..:.....:..x..:..:.....:.....x.....x.....:..:x....::.:..:...... 117M4I4M3I7M1I21M10I30M5I36M10I17M11I7M2I12M4I19M5D16M20I15M7I13M5I31M4I8M24I16M1I3M1I6M4D11M5I14M3I15M2D17M18I13M1I11M7D30M5I14M4I19M5D8M12D10M2D15M1D234M 522/789 66.2% 937/94230402 0.0% 186/789 23.6% -5875670 -88354732 +15772 chr4 + 190214555 3174679 3174678 3175113 435 GATATTCTCATTCTCTGCTTCCCTTTTATTCCCATTTGGCAGATGGTTTGATGTCCTCCAGAAAGTGTCTACCCAGTTGAAGACAAACCTCACGAGTGTCACAAAGAACCGTGCAGATAAGGTAAATGGTGCCGTTTGTGGCATGTGAACTCAGGCGTGTCAGTGCTAGAGAGGAAACTGGAGCTGAGACTTTCCAGGTATTTTGCTTGAAGCTTTTAGTTGAAGGCTTACTTATG-----GATTCTTTC----------TTTCTTTT---TTTCTTTTTTATAGAATGCTATTCATAATCACATTCGTTTGTTTGAACCTCTTGTTATAAAAGCTTTAAAACAGTACACGACTACAACATGTGTGCAGTTACAGAAGCAGGTTTTAGATTTGCTGGCGCAGCTGGTTCAGTTACGGGTTAATTACTGTCTTCTGGATTCAGATCAGGTTTGT chr4 - 94230402 9049424 9049423 9049859 85180544 85180543 85180979 436 GGTTTTTTTAGCGTATGTTTTTTGTTTGTTTTTATC--ACAGATGGTTTGATGTGCTGCAGAAAGTTTCTACGCAGCTGAAAACTAATATTACCAGTGCAGCAAAGCACCGTGCTGATAAGGTACTCATGTCTATCTACTGCCTTCTGAGTGTGCTGTACAATAGCTTTAGA--------------ACGCTTTCCCCA-GCTTTACTTTTTACTTTTAAAAAGTAATTTGGTTTTGAATGAGACCTTTTCACATATAAGATTACTTCAAAATTTCTCTATTACAGAATGCTATTCACAATCACATTCGTTTATTTGAACCCCTTGTTATAAAAGCATTGAAACAATACACTACAACAACATCGGTACAGCTGCAGAGACAAGTTTTAGACTTGCTTGCTCAACTGGTTCAGCTACGAGTTAACTACTGTCTTCTGGATTCAGATCAGGTTGGT .:.x..:.:.x:x.x..:..:::x...:..:::..:--:...............x..x........x.....x...:....:..x..:x.:..x....:x:.....x.......x.........xx::xxx.::.:.::x..x.x:x:.x.xx.x:..::x.xx...xx...--------------.x:......xx:-::...:...xxx:......:xx::x:::..:x..x..-----..:::....----------..x...:x---.....:.x...:.............:..............:........:..............x..:.....:.....x..x.......xx..:...:.:....::..:........:.....x..x..:.........:....:.....:...........................x.. 36M2D134M14D12M1D37M5I9M10I8M3I182M 296/418 70.8% 436/94230402 0.0% 35/418 8.4% -5874745 -88355657 +3566 chr4 + 190214555 3176004 3176003 3176046 43 TTTTTTTTGTTGTTGTTGTTTGTTTTTTTTTGTTTTTTTTTTG chr4 - 94230402 75733746 75733745 75733788 18496615 18496614 18496657 43 TTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTTTG ......................x.......x............ 43M 41/43 95.3% 43/94230402 0.0% 0/43 0.0% -72557742 -21672660 +5069 chr4 + 190214555 3177293 3177292 3177390 98 TCCTATTATTGATGTGAAATTTT---ATTTTCCTTC---CTGTAGGTGTTTATTGGCTTTGTATTGAAACAGTTTGAATACATTGAAGTGGGCCAGTTCAGGTA chr4 - 94230402 9050769 9050768 9050872 85179531 85179530 85179634 104 TTCTGTTTCTGTTGTGTAATGTTTTAACTTTCATTCTCTCCTCAGGTGTTTATTGGATTTGTGCTAAAGCAGTTTGAATACATTGAAGTCGGACAGTTCAGGTA .:..:..x:..x....x...x..---.:....x...---.:x:.............x.....::.:..:....................x..x........... 23M3I10M3I65M 79/98 80.6% 104/94230402 0.0% 6/98 6.1% -5873476 -88356926 +11722 chr4 + 190214555 3178284 3178283 3178450 167 GTTTTTGTTTTTAGGGAATCAGAGGCAATCATTCCAAACATCTTTTTCTTCTTGGTATTACTATCTTATGAACGCTATCATTCAAAACAGATCATTGGAATTCCTAAAATCATTCAGCTCTGTGATGGCATCATGGCCAGTGGAAGGAAGGCTGTGACACATGGTAA chr4 - 94230402 9051520 9051519 9051686 85178717 85178716 85178883 167 GTTTTTATTTTCAGAGAATCGGAAGCAATTATTCCGAATATCTTCTTTTTTCTGGTGTTGCTGTCTTACGAGCGATATCATTCCAAACAGATAATTGGAATTCCAAAGATCATCCAGCTGTGTGATGGCATCATGGCCAGTGGGAGGAAAGCTGTTACGCATGGTAA ......:....:..:.....:..:.....:.....:..:.....:..:..::....:..:..:.....:..:..x........x........x...........x..:.....:.....x.......................:.....:.....x..:........ 167M 139/167 83.2% 167/94230402 0.0% 0/167 0.0% -5873236 -88357166 +11168 chr4 + 190214555 3180513 3180512 3180658 146 AGCCATACCGGCTCTGCAGCCCATAGTCCACGACCTCTTTGTATTAAGAGGAACAAATAAAGCTGATGCAGGAAAAGAGCTTGAAACCCAAAAAGAGGTGGTGGTGTCAATGTTACTGAGACTCATCCAGTACCATCAGGTAAGAG chr4 - 94230402 9052236 9052235 9052381 85178022 85178021 85178167 146 AGCAATACCAGCTCTGCAGCCCATCGTTCATGATCTGTTTGTGTTAAGAGGAACAAATAAAGCTGATGCTGGAAAAGAGTTGGAAACCCAGAAGGAGGTGGTGGTGTCAATGCTGCTGAGACTTATTCAGTACCATCAGGTAAAAG ...x.....:..............x..:..:..:..x.....:..........................x.........:.x........:..:..................:.:........:..:................:.. 146M 128/146 87.7% 146/94230402 0.0% 0/146 0.0% -5871723 -88358679 +8110 chr4 + 190214555 3182352 3182351 3182473 122 AGGTGTTGGAGATGTTCATTCTTGTCCTGCAGCAGTGCCACAAGGAGAATGAAGACAAGTGGAAGCGACTGTCTCGACAGATAGCTGACATCATCCTCCCAATGTTAGCCAAACAGCAGGTT chr4 - 94230402 9054271 9054270 9054392 85176011 85176010 85176132 122 AGGTGCTGGAAATGTTCATCTTAGTATTGCAGCAATGTCATAAAGAAAATGAAGACAAATGGAAGAGATTATCTCGGCAAATAGCTGACATTATTCTCCCAATGCTTGCAAAACAACAGGTT .....:....:........::.x..x:.......:..:..:..:..:...........:......x..:.:.....:..:...........:..:.........:.x..x.....:...... 122M 98/122 80.3% 122/94230402 0.0% 0/122 0.0% -5871919 -88358483 +9036 chr4 + 190214555 3186575 3186574 3186724 150 TTTGTGGTGTCTAATTCCACAGATGCACATTGACTCTCATGAAGCCCTTGGAGTGTTAAATACATTATTTGAGATTTTGGCCCCTTCCTCCCTCCGTCCGGTAGACATGCTTTTACGGAGTATGTTCGTCACTCCAAACACAATGGTGAG chr4 - 94230402 9056167 9056166 9056314 85174089 85174088 85174236 148 TTTGTGGTTTTC--TTTTACAGATGCACATAGATTCTCATGATGCTCTAGGAGTGCTGAACACTTTGTTTGAAATTTTGGCTCCTTCTTCCCTTCGCCCTGTTGACATGCTTTTAAGAAGTATGTTTGTTACTCCTAAAACAATGGTAAG ........x.::--..::............x..:........x..:..x......:.:..:..x..:.....:........:.....:.....:..:..x..x............x.:........:..:.....x..x........:.. 12M2D136M 119/148 80.4% 148/94230402 0.0% 2/148 1.4% -5869592 -88360810 +12377 chr4 + 190214555 3187639 3187638 3187897 259 TGTTTATTT--TAGGCGTCCGTGAGCACTGTTCAACTGTGGATATCGGGAATTCTGGCCATTTTGAGGGTTCTGATTTCCCAGTCAACTGAAGATATTGTTCTTTCTCGTATTCAGGAGCTCTCCTTCTCTCCGTATTTAATCTCCTGTACAGTAATTAATAGGTTAAGAGATGGGGACAGTACT---TCAACGCTAGAAGAACACAGTGAAGGGAAACAAATAAAGAATTTGCCAGAAGAAACATTTTCAAGGTATGCTTTCT chr4 - 94230402 9056876 9056875 9057139 85173264 85173263 85173527 264 TGTTTGTTTGTTAGGCGTCAGTGAGCACTGTCCAGCTATGGATTTCTGGAATTTTAGCTATCCTTAGAGTTCTCATTTCACAATCCACAGAAGACATAGTTCTATCTCGTGTTCAAGAGCTTTCGTTCTCACCATATTTGATTTCACGTCAAGCAATTAACAGACTGAGACATGGTGAAAATAACGTATCTGCACAAGAGGATCACAGTGAGGTTAAACAGACTAAATATCTCCCTGAAGAGACATTTTCTAGGTATGATGCCT .....:...--........x...........:..:..:.....x..x......:.:..:..::.x..:.....x.....x..:..x..x.....:..x.....x......:....:.....:..x.....x..:.....:..:..x:..xx..:......:..::.:...x....x..x.:..x:---..x:.:.x...:..x........:.xx.....:.:x..:x..:.x..x.....:........x.......x.x:.. 9M2I174M3I76M 192/259 74.1% 264/94230402 0.0% 5/259 1.9% -5869237 -88361165 +10075 chr4 + 190214555 3188816 3188815 3189096 281 CATTTCACTTTAGCGGTTAATGTACTCTA---CCTATATTTTTACTTTATATTTACCATATATCTTTTCATGTATACTTGGCGT----AAGTGCTTTATAGTA---GTCACCTAATTCACTGTCATCTTTTTTGTTTCTTGGAAGGTTTCTATTACAACTGGTTGGTATTCTTTTAGAAGACATTGTTACAAAACAGCTGAAGGTGGAAATGAGTGAGCAGCAACATACTTTCTATTGCCAGGAACTAGGCACACTGCTAATGTGTCTGATCCACATCTTCAAGTCTGGTA chr4 - 94230402 9058248 9058247 9058528 85171875 85171874 85172155 281 CATTTTA-TTTAG-GATGAATGCACAGTAATTTTTTTATCTTGATTTTAAACTTACCG---AGTTTTATAGGCAGACGTGTTGTTCTGAAACAGGTTGCAGTGATGGTTTTCCTACTGATTGTATTCTTGTGTTTTC-----AAGGTTCCTGTTACAGCTGGTTGGTATTCTACTTGAAGATATTGTTACCAAACAAGTGAAAGTGGACATGAATGAGCAACAGCACACTTTCTATTGCCAGGAGCTAGGCACTTTGCTTATGTGCTTAATACATATCTTCAAATCAGGTA .....:.-.....-.:.x....:..xx..---::.x...:..x.:....x.:.....:---.x:...x:.x.:.x..x..x:..----..:::xx..::...:---..:x:.:x.:.x.:...xx....x.x.x..:-----......:..:.....:..............x:.x.....:........x.....:x....:.....x....:......:..:..:.................:........x:....x.....::.:..x..:........:..x.... 7M1D5M1D15M3I26M3D23M4I15M3I31M5D149M 197/271 72.7% 281/94230402 0.0% 20/271 7.4% -5869432 -88360970 +10529 chr4 + 190214555 3199720 3199719 3199944 225 CTTTGTTTCTAGGAATGTTCCGGAGAATCACAGCAGCTGCCACTAGGCTGTTCCGCAGTGATGGCTGTGGCGGCAGTTTCTACACCCTGGACAGCTTGAACTTGCGGGCTCGTTCCATGATCACCACCCACCCGGCCCTGGTGCTGCTCTGGTGTCAGATACTGCTGCTTGTCAACCACACCGACTACCGCTGGTGGGCAGAAGTGCAGCAGACCCCGAAGTAGG chr4 - 94230402 9060992 9060991 9061216 85169187 85169186 85169411 225 CTTATTTTTCAGGGATGTTTAGAAGAATCACAGCTGCAGCCACCAGGCTTTTTACAGGAGATGGATCTGATGGTAGTTTCTATACCCTTGAAAGTCTGAGTGACCTTGTTCAGTCCATGGTTCCCACACATCCTTCCTTAGTTCTCCTCTGGTGTCAGATCCTACTTCTTGTTAATTACACAAACTACAACTGGTGGTCAGAAGTGCATCAAACTCCAAAGTAAG ...xx...::...:.....:x.:...........x..x.....:.....x..:xxx:.x.....x.x..::..:........:.....x..x..::...::xxx.xx.:..:x......:.:x....x..:..xx..:.:..x..x..............x..:..x.....:..::....x:.....x:.......x..........x..:..:..:.....:. 225M 160/225 71.1% 225/94230402 0.0% 0/225 0.0% -5861272 -88369130 +8942 chr4 + 190214555 3203995 3203994 3204161 167 TGCTCCTTCTAGAAGACACAGTCTGTCCAGCACAAAGTTACTTAGTCCCCAGATGTCTGGAGAAGAGGAGGATTCTGACTTGGCAGCCAAACTTGGAATGTGCAATAGAGAAATAGTACGAAGAGGGGCTCTCATTCTCTTCTGTGATTATGTCGTAAGTTTGAAAT chr4 - 94230402 9062449 9062448 9062615 85167788 85167787 85167954 167 TACTTCCTGCAGGAGACACAGTCTTTCTACTACTAAATTACTTAGCCCTCAGATATCTGGAGATAGTGATGAATCAGATTCAGAATCTAAACGTGGCATGTGCAATCGAGAGATAGTGAGAAGAGGAGCACTCATTCTTTTTTGTGACTATGTGGTAAGTTTTGAAT .:..:.:.x:..:...........x..:.x:..x..:........:..:.....:........x::x..x..x..x..:.::.x.x.:....x...x.........x....:.....:x.......:..x........:..:.....:.....x........x:... 167M 125/167 74.9% 167/94230402 0.0% 0/167 0.0% -5858454 -88371948 +12378 chr4 + 190214555 3206480 3206479 3206683 204 TCATATTTTTCCTT---AGTGTCAGAACCTCCATGACTCCGAGCACTTAACGTGGCTCATTGTAAATCACATTCAAGATCTGATCAGCCTTTCCCACGAGCCTCCAGTACAGGACTTCATCAGTGCCGTTCATCGGAACTCTGCTGCCAGCGGCCTGTTCATCCAGGCAATTCAGTCTCGTTGTGAAAACCTTTCAACTGTACGTCT chr4 - 94230402 9064027 9064026 9064233 85166170 85166169 85166376 207 TTATTTTTTTCCCTTTCAGTGTCAAAACCTGCATGATTCAGAACACTTGACTTGGCTTATTGTGAATCATGTTCAAGACTTGATTAATCTGTCCCATGAGCCTCCAGTACAAGACTTCATTAGTGCTGTTCACAGAAATTCGGCAGCCAGTGGTCTCTTCATCCAGGCCATTCAATCACGGTGTGAGAATCTTGCAGCTGTAAGTCT .:..x.......:.---.......:.....x.....:..x..:.....:..x.....:.....:.....::.......::....:.::..x.....:..............:........:.....:.....:x.:..:..x..x.....:..:..x...........x.....:..x..x.....:..:...x..:.....x.... 14M3I190M 162/204 79.4% 207/94230402 0.0% 3/204 1.5% -5857547 -88372855 +14244 chr4 + 190214555 3206803 3206802 3207367 565 TTAGCCAACCATGCTGAAGAAAACTCTTCAGTGCTTGGAGGGGATCCATCTCAGCCAGTCGGGAGCTGTGCTCACGCTGTATGTGGACAGGCTTCTGTGCACCCCTTTCCGTGTGCTGGCTCGCATGGTCGACATCCTTGCTTGTCGCCGGGTAGAAATGCTTCTGGCTGCAAATTTACAGGTATTGGGAAGAGAAACCCTGATATTGATTTATATTGAAAATTTAGCAGGCCAAGCAA-AACAGGTGGCTGGCTTTTTCCTCCGTAAGTATGGTCTTGACATGGTCACCGATAGAAACATGGAAACATCTGCAAACTTGCCGTTACTCGTGTGTCCGATCTGACTGTTTCTTGTATTTTTTTCTAGTCTGCCCTTACTAGGATGAACTGTACACATCAGTTCATCCTTTTTAAATGAGCATGAGGTTATTTTGGGTTGTTAGGTGTTACAAACACACTAATGTGTTTT-TGTCTATT--AGAGCAGCATGGCCCAGTTGCCAATGGAAGAACTCAACAGAATCCAGGAATACCTTCAGAGCAGCGGGCTCGCTCAGAGGTAATGCTGG chr4 - 94230402 9065402 9065401 9065881 85164522 85164521 85165001 480 TTAGCCTACGACTCTGAAGAAGACTTTACAGTGCTTAGAGGGGATACATCTCAGCCAGTCTGGAGCAGTCTTGACGTTGTATGTTGATAAGCTTCTTTGTACTCCATTCCGTGTGCTTGCTCGCATGGTTGACACACTGGCTTGCCGTCGGGTAGAAATGCTTTTGGCTGCAACTTTACAGGTA-----AAGATAAAT----ACATTTATCTGCAAATCAGTTTGGGTAGTGCTAGCAATAACAA-------------TCAAATGTAAGTGT----TTAAAGTTATTTCTG---------TGGAAAAAT---AACGCTTTATGTTATATATA-----GATATGAGTG---ATTGCATTTCAGTTTA-TCTGC-----------------ATATGAATCTCATAATCTGTTCTAAGTACATATGTG--TATTTT-----------------------ACTTGTTTTTCTTGTGACTCCTACAGAACAGCATTACTCAGTTACCAGTTGAAGAACTGGATAGAATTCAGGAATACCTTCAGAACAGTGGATTAGCAACGAGGTAATACCAG ......x..x.:x........:...:.x........:........x..............x.....x..x:.x...:.......x..:.:......x..:..:..x...........x...........:....:x..x.....:..:...............:.........x..........-----....x...:----.:...x..:.::.xxxx.:x..x:.:..xx.x.....-....:-------------..xxx:......:.----..:.x:.x:.:x.:.---------......x..---x.x:...xx:....:x::.:-----...x...x..---x...:....:xx.:..-.....-----------------:..::x...xxx.x...:x..:...:.:x::...x.--......-----------------------...x:.x.x.:..-..x..x:.--...:......x:.:.....:...:.x........x:.:.....:................:...:..::.x..xxx........:.::. 184M5D9M4D37M1I5M13D14M4D15M9D9M3D20M5D10M3D16M1D5M17D36M2D6M23D13M1I8M2I89M 345/476 72.5% 480/94230402 0.0% 93/476 19.5% -5858599 -88371803 +11256 chr4 + 190214555 3211910 3211909 3212171 262 TTTAATGCTCTGATTTCAGGAGTTCAACCTAAGCCTGCTAGCTCCATGCTTAAGCCTAGGGATGAGTGAAATTTCTGGTGGCCAGAAGAGTGCCCTTTTTGAAGCAGCCCGTGAGGTGACTCTGGCCCGTGTGAGCGGCACCGTGCAGCAGCTCCCTGCTGTCCATCATGTCTTCCAGCCCGAGCTGCCTGCAGAGCCGGCGGCCTACTGGAGCAAGTTGAATGATCTGTTTGGTAATTAAAATTAAAATTTATCTTATTTT chr4 - 94230402 9070812 9070811 9071072 85159331 85159330 85159591 261 TTTACTGTTTT-ATTTCAGGAATTCAACCTGAGCTTGTTAGCACCTTGTTTAAGCCTTGGCATGAATGAGATCTCACGAGACCAGAAGAGTAGCCTTTTTGAAGCAGCTCGGAGGGTAACACTGGATCATCTGTCCGCCACTGTACTAAACCTTCCTGCCAGCCACCAGGTTTTCCAACCACTTTTGCCAACTGAGCCATCAGCCTACTGGAAAAAACTAAACGATATCTTTGGTAATAGAAATAACGGTCTTTTTAAGTTT ....x..:.:.-.........:........:...:..:....x..x..:........x..x....:...:..:..xx.x.:..........:x...............:..x::...:..x....x:.:.x..xx..x...:..:.x:x.x..:.....::x...:..x..:.....:..xxxx:....x:.x.....:x.:..........:x..::.:..:...x.x.........x:....x.x::.:.x.:.x.x... 11M1D250M 183/261 70.1% 261/94230402 0.0% 1/261 0.4% -5858902 -88371500 +5416 chr4 + 190214555 3215091 3215090 3215217 127 TGTTCTGTTGTAATTTTAGTTGCAGTGCAGCCTGGAGAGCAGCTTCTTAGTCCAGAAAGAAGGACAAATACCCCAAAAGCCATCAGCGAGGAGGAGGAGGAAGTAGATCCAAACACACAGAGTAAGT chr4 - 94230402 9072352 9072351 9072472 85157931 85157930 85158051 121 TATTTTTGTCTAAATTCAGTTGCCGTTGAACCTGGAAATCAACTTCTTAGTCCTGAAAGGAAGAAGAATGCTTCAAAAGGCTTAAGT------GAGGATGAAGTTGATTCAAACATGCACAGTAAGT .:..:.xx.x...x..:......x..xx.:......:.x..:...........x.....:.:..x:...:.::......x.x.x..:------.....x.....x...:......::..x....... 87M6D34M 89/121 73.6% 121/94230402 0.0% 6/121 5.0% -5857261 -88373141 +9741 chr4 + 190214555 3217770 3217769 3217963 194 AAGTATATCACTGCAGCCTGTGAGATGGTGGCAGAAATGGTGGAGTCTCTGCAGTCGGTGTTGGCCTTGGGTCATAAAAGGAATAGCGGCGTGCCGGCGTTTCTCACGCCATTGCTAAGGAACATCATCATCAGCCTGGCCCGCCTGCCCCTTGTCAACAGCTACACACGTGTGCCCCCACTGGTGAGTCTGCT chr4 - 94230402 9073343 9073342 9073536 85156867 85156866 85157060 194 AAACACATTACTGCAGCTTGTGAAATGGTAGCTGAGATGGTGGAATGTTTGCAGACTGTCCTGGCTTTGGGTCATCATAGAAACAGCAGTATCCCAGCATTTCTTACTCCTGTCCTCAAGAATATCATCATCAGTTTAGCAAGGCTGCCTCTAGTGAACAGTTACACAAGAGTGCCTCCCTTGGTATGTTTGTT ..::.:..:........:.....:.....:..x..:........:.x.:.....x.x..x:....:.........x.x..:..:...:.::.x..:..:.....:..x..xx.x..x.:...:...........::.:..xx.x.....:..x..x.....:......x.x.....:..x:....:x..:..:. 194M 140/194 72.2% 194/94230402 0.0% 0/194 0.0% -5855573 -88374829 +8717 chr4 + 190214555 3220154 3220153 3220311 158 TGATGTCACTTCCTTTTCATCTTCTCAGGTGTGGAAGCTTGGATGGTCACCCAAACCGGGAGGGGATTTTGGCACAGCATTCCCTGAGATCCCCGTGGAGTTCCTCCAGGAAAAGGAAGTCTTTAAGGAGTTCATCTACCGCATCAACACACTAGGTA chr4 - 94230402 9074711 9074710 9074868 85155535 85155534 85155692 158 TAATCTTTCTTTCTTCGTATTTCACCAGGTCTGGAAATTAGGCTGGTCACCAAAGCCTGCAGGTGACTTTGGCACAGTTTTTCCTGAAATCCCAGTAGAATTTCTTCAAGAAAAAGAGATCTTTAAAGAGTTCATCTATCGCATTAACACACTTGGTA .:..x.:x...:...:x:..:.:x:.....x.....::.x..x........x..:..x.x...x..:..........:x..:.....:.....x..:..:..:..:..:.....:..::.......:...........:.....:........x.... 158M 118/158 74.7% 158/94230402 0.0% 0/158 0.0% -5854557 -88375845 +6691 chr4 + 190214555 3222376 3222375 3222503 128 TATATTTCTAGGCTGGACCAGTCGTACTCAGTTTGAAGAAACTTGGGCCACCCTCCTTGGTGTCCTGGTGACGCAGCCCCTCGTGATGGAGCAGGAGGAGAGCCCACCAGAAGTAAGGCCACACCCTG chr4 - 94230402 9075280 9075279 9075407 85154996 85154995 85155123 128 TGTTTTCTTAGGCTGGATCAGCCGTACCCAGTTTGAAGAGACGTGGGCTACTTTGCTTGGTGTACTTGTAACTCAGCCTATTGTAATGGACCAAGAAGAGAACCAGCAAGAGGTAATGTTGCTCACTG .:.x..::.........:...:.....:...........:..x.....:..::.x........x..x..:..x.....:x.:..:.....x..:..:....:..x:.x...:....x.:::.x.x... 128M 93/128 72.7% 128/94230402 0.0% 0/128 0.0% -5852904 -88377498 +15636 chr4 + 190214555 3223389 3223388 3224157 769 GTGGGCTCTCCTTCCAGGAAGACACAGAGAGGACCCAGATCAACGTCCTGGCCGTGCAGGCCATCACCTCACTGGTGCTCAGTGCAATGACTGTGCCTGTGGCCGGCAACCCAGCTGTAAGCTGCTTGGAGCAGCAGCCCCGGAACAAGCCTCTGAAAGCTCTCGACACCAGGTTTGCTTGAGTTCCCACGTGTCTCTGGGACATAGCAG---GTGCTGGGGA-CAGTGGGTTCCCCGCTGAAGCGTCCAGCAGCTTCAACCAGGCCGTTTTCCTTCATTGCTAGAATTGAAAACACCGTCCGTGTGGCCTGTGCAGGAGATGCAGACCCAAAGGTGGCCTCCTGGTCAGTGAGAAGCTGGAAACGTGACAGGAACTGA----CGTGGGGTTATTGAGCATTTAGGGGAAGACGTTAGCAGAGCAGGAATGAGCAGGCAACTAGTAGAACACCCACTTAAGGGCTCACGGACAGGTGCTCACTTAGGAAGTGAGTTTCA--TTTGGTATTACAC------CAGGTTCCTTTAGGCAAAGC---GGAGGGAAAGTTCTGGTGTTTTTCACTTGTAAGATTTTGAAGGAAACAAAACACTCTTTACCTTTTTTCTAAAATGT--AGGTTTGGGAGGAAGCTGAGCATTATCAGAGGGATTGTGGAGCAAGAGATTCAAGCAATGGTTTCAAAGAGAGAGAATATTGCCACCCATCATTTATATCAGGCATGGGATCCTGTCCCTTCTCTGTCTCCGGCTACTACAGGTA-----CCTGAGGGAAAGGGTGCGGGGGA chr4 - 94230402 9076069 9076068 9076790 85153613 85153612 85154334 722 GTAAGTTCATTTTACAGGAAGATACAGAGAGGACCCAAATTAATGTTCTTGCAGTACAAGCCATAACTTCCTTGGTGCTGAGTGCAATGACAATACCTGTTGCAGGCAATCCAGCAGTCAGCTGTTTGGAACAGCAGCCTCGCAACAAAGCTTTAAAAGCTCTGGACACAAGGTATTTT----TTTCCACTTA-CTTTGAAATGTGTAAATTTATACTTGTGATTAATATGTAACT-------GCATTTAG----TTTAATCTAGC----------AATAGCAAAAAT-----GCACAGACTGTATTTTTTT-------AATGAATTTATAAAGGTGGA--TCTGTTTGCATAGAAGCC---------ACGTGGACTTAGCATCATGATCTTACTGAG---TTA---CAAGACAGTATCTGG--------AAGAAGGCAATGAATGTAAATTCTGGTCAACAGTGTGCAGAATGTATCTC------TAAATATTTCTCAGTTTTAGTATCCCTAAAAATGCAAGTAAGTGTAGACGCAGCATTGTAGAGTAAGCTAGTCAGACTTGCAC----AGAATTGTTAAAGGGAAAATATGTTTTAATCATTTCTTGTTGGGTTTTCAGGTTTGGGAGGAAGCTAAGTGTTATCAGGGGAATTGTTGAACAAGAAATCCAAGCAATGGTATCTAAGAGAGATAATATTGCTACTCATCACTTATATCAAGCTTGGGACCCTGTTCCATCACTTTCTCCTGTTAGTACAGGTAGGTGCCTTGGGAGGGAGGGAGGGAGTGA ..::.:..x::..x........:..............:..:..:..:..x..x..:..:.....x..:..x:.......x...........x:.:.....x..x.....:.....x..x.....:.....:........:..x.....:x..:.:........x.....x....x.x:.----..:....x.:-..:..::.::.:xx.:---:.:..x.x..-:.:.:x..xx.:-------..:.::..----..:..:.x:..----------x..x..x.:...-----:...x.x.:..:.xx::.x-------:...x.xx:x:........x--:...x.::xxx......:---------..:x.:...x.----.:..:xx...:....---...---x.....:x..x.x.:--------:..x......:x.:.:x..xx:.::x.:..x:.:x::.:..xx.xxx...------x..:.:xx.:...--...:....:x.xx------..:..xxx.x...:.:x...---.x..:.x...:.xxxxx.x:..x...----.::...x.x..:.::.x..x.:::.:.xxx.x...:..x.x:::.x.--.................:..::.......:..:.....x..:.....:..:...........x..x........x........:..:.....:........:..x.....:.....:..x..x..x.....x.:..x........-----.:..:.:.::....x.x.:.x.. 179M4D10M1D16M3I10M1I12M7D8M4D11M10D12M5D19M7D20M2D18M9D11M4I15M3D3M3D15M8D50M6D13M2I13M6I20M3I26M4D47M2I145M5I23M 464/696 66.7% 722/94230402 0.0% 99/696 14.2% -5852680 -88377722 +9889 chr4 + 190214555 3229885 3229884 3230047 163 AGCTTCTAGTGGTCTCAGACTTGTTCACCGAGCGCAACCAGTTTGAGCTGATGTATGTGACGCTGACAGAACTGCGAAGGGTGCACCCTTCAGAAGACGAGATCCTCGCTCAGTACCTGGTGCCTGCCACCTGCAAGGCAGCTGCCGTCCTTGGGATGGTAAG chr4 - 94230402 9078978 9078977 9079140 85151263 85151262 85151425 163 AGCTCCTGGCAGTATCGGACTTATTTACAGAAAGAAATCAGTTTGAGATGATGTATACAACACTGACAGAACTGCGAAAGGTGCATCCATCAGAAGATGAGATTCTTATACAGTATTTGATACCAGCCACTTGTAAGGCTGCAGCTGTTCTTGGGATGGTAAG ....:..:.::..x..:.....:..:..x..:x.x..:.........x........:::..:................:......:..x........:.....:..:::x.....::..:.:..x.....:..:.....x..x..:..:.............. 163M 125/163 76.7% 163/94230402 0.0% 0/163 0.0% -5849093 -88381309 +9736 chr4 + 190214555 3233142 3233141 3233358 217 CTTTTGTCTGTGTGTGCCTAGGACAAGGCCGTGGCGGAGCCTGTCAGCCGCCTGCTGGAGAGCACGCTCAGGAGCAGCCACCTGCCCAGCAGGGTTGGAGCCCTGCACGGCGTCCTCTATGTGCTGGAGTGCGACCTGCTGGACGACACTGCCAAGCAGCTCATCCCGGTCATCAGCGACTATCTCCTCTCCAACCTGAAAGGGATCGCCCAGTGAG chr4 - 94230402 9080433 9080432 9080648 85149755 85149754 85149970 216 CTTTTTTTTGAATGC-TTTAGGATAAAGCTGTGGCTGAACCAGTAAGTCGACTGCTGGAATCTACCTTAAGAAGCACCCATATGCCAAGTCGAATTGGGGCTCTGCATGGAATTCTTTATATCCTTGAGTGTGATCTGCTTGATGAGACAGCAAAGCAACTCATTCCAATCATCAGCGAGTATTTACTCTCCAATTTGAGAGCAGTAGCACAGTAAG .....x.:..x:..:-::.....:..:..:.....x..:..x..x..:..x........:xx:..x:.x..:....x...:x....x..:x.::....:..:.....:..x:.:..:...:.x..x.....:..:.....x..:..x..x..x.....:.....:..::..........x...:.x........::...:..x::.x..x....:.. 15M1D201M 151/216 69.9% 216/94230402 0.0% 1/216 0.5% -5847291 -88383111 +17383 chr4 + 190214555 3235265 3235264 3236262 998 TGCTGTCTCCCGTTTTCAGCTGCGTGAACATTCACAGCCAGCAGCACGTACTGGTCATGTGTGCCACTGCGTTTTACCTCATTGAGAACTATCCTCTGGACGTAGGGCCGGAATTTTCAGCATCAATAATACAGGTGAGTGG----GCCCTGGCTGTCTT---------------------CCTCTGCACA---------------------CGGGGAGTGGGCTTCCCTTCTCTT----TTCCTTGCAGGATCATACCAGTGGGCCAGTTT------------------TGACTTG--GTCGGGAGGAGGCATGAACA--CCTGAGACTGTGCAGCGATTCTTTGACACAGAGGCCTTTCTCCCTGTG-CAGATGTGTGGGGTGATGCTGTCTGGAAGTGAGGAGTCCACCCCCTCCATCATTTACCACTGTGCCCTCAGAGGCCTGGAGCGCCTCCTGCTCTCTGAGCAGCTCTCCCGCCTGGATGCAGAATCGCTGGTCAAGCTGAGTGTGGACAGAGTGAACGTGCACAGCCCGCACCGGGCCATGGCGGCTCTGGGCCTGATGCTCACCTGCATGTACACAGGTGAGCATGTACACGGTGCCCATAAGGCCAGCCCAAGTCCTGTTCAAGGGAGGCAGGAGCATGCTCACTCAAGGGACCTCGACTAGGTGCCCTCTGATTTCACACTTCTGGTGTTGCCCCAAGCCGGCCCCATCACCTTGCAAGAAAGGCTCTGGAGCCCCCAGGGCTGGAGTACCTGGTCAGGGTTGACCGTCCCTGTGGTCACTCATCCCATGTGGCTGAGCTGGGCTGGGTCCTGGGCAAGCAAGGGGCTGATATCACCTGCTTTCAGATCTCCAGGGACTCACTGGACCCCTGTGTACAAAGCACTGTCTACAGAGCCTATTGGGTTGTATAGAGGTAACCTTCGTACTGAACACTTTTGTTACAGGAAAGGAGAAAGTCAGTCCGGGTAGAACTTCAGACCCTAATCCTGCAGCCCCCGACAGCGAGTCAGTGATTGTTGCTATGGAGCGGGTATCTGTTCTTTTTGATAGGTAAGAAG chr4 - 94230402 9081413 9081412 9082254 85148149 85148148 85148990 842 TGTTTTTTCTTATTTGCAGTTGTGTCACTGTCCATAACCAACAGCATATCTTAGTAATGTGTGCAGCTGCGTTCTATTTGATAGAGAACTATCCACTTGATGTGGGACCTGAATTCTCTGCAGGAATTATACAGGTATGTTGTAATGCCC--ACTGTCACAGGTAATTATGTAACTTGAGATCACCACATAATATATTATACTCTTAATTTTTGTGATGTAGGTTTTACTTTCGTCAGGCTTCCTTTAAACAGCAGTCCTACAATGCAGTTCATTACACATAAGCTGTAATAGCGTGCTGCTAGAAGGTGACCTAAACATACCTCAAAAAACAAGTAGAT-------------GGCTTTTTTCTTTATTTCAGATGTGTGGAGTCATGGTGTCTGGAAGTGATGAATCAACACCATCCATTATTTACCATTGTGTCCTGAGGGGATTAGAACGACTCCTCCTTTCGGAGCAGCTTTCCAGGCTGGATAGTGAATCTCTGGTTAAACTGAGTGTTGACAGAGTGAATGTGCAGAGCCCCCACAGAGCAATGGCAGCTCTTGGGCTAATGCTGACTTGCATGTACACAGGTATTTATGT------------------------------TTTT---------------------------------------TAAATACCTTTTGAT-----------------------------------------------------------------GTGCTGAAAGACTAGCTTA---CTAACAGT---------------------------------------------------------GCTAATTTTAATTTTTTTT-------------TTCAATTG-TTCTTGCTAGCAAGG----ATAAAAAGGTCTTATTCTGGCATTTGCAGTAAA--TTTGTAACGAATTATTTTGGTTTAGGAAAGGAAAAAGTCAGCCCAAGTCGTTCCACAGATGCAAATCCTGCAGCCCCCGACAGTGAATCTGTGATCGTGGCTATGGAACGAGTATCTGTTCTTTTTGATAGGTGAGAGG ..:.x.:..:::...x...:..:..x.x::.:..:.:...:.....::.x:.:..x........x:.......:..::.x..x...........x..x..:..:..:..x.....:..x...xx...x........:x..x.----....--:.....x:---------------------:.x.::..:.---------------------:.x.:x..:..:..:x...::x.:----......xx.:x.x..xx..x::::xx.....:------------------.::.x..--.:::.:...x.:.x.:....--...x.:.xx:::x:xx...-------------...:...:..::.:.x-...........:..x...x.............x..:..x..x..x.....:........:....:...x..:..x:.:..:..x.....x..:..x........:...x.x......:xx.....x.....:..:........x...........:.....x.....x...x.:..x.....:.....x..x..:.....x..:...............:xx:....------------------------------.x..---------------------------------------..::.:..:.:....-----------------------------------------------------------------.x....:.:x..:x.x.:.---:.:..x..---------------------------------------------------------...:..x.:.x:.x:...:-------------:...x.x.-::.:..:xx:...:.----:.xx.x..:x.:....xx.x::.x.:x..xx..--..:...x:...:xx.....x.x:.........:........:..::..x.xx.:x....:x.x....................:..:..x.....:..x........:..:......................:...:. 142M4I4M2D8M21I10M21I24M4I32M18I7M2I20M2I19M13D16M1I227M30D4M39D15M65D19M3D8M57D19M13D8M1D15M4D33M2D139M 532/769 69.2% 842/94230402 0.0% 302/769 39.3% -5846148 -88384254 +10404 chr4 + 190214555 3238445 3238444 3238616 172 AGGATCAGGAAAGGCTTTCCTTGTGAAGCCAGAGTGGTGGCCAGGATCCTGCCCCAGTTTCTAGACGACTTCTTCCCACCCCAGGACATCATGAACAAAGTCATCGGAGAGTTTCTGTCCAACCAGCAGCCATACCCCCAGTTCATGGCCACCGTGGTGTATAAGGTGAGGT chr4 - 94230402 9084420 9084419 9084591 85145812 85145811 85145983 172 AGGATCAGGAAGGGATTTCCTTTTGAAGCTAGAGTAGTGGCCCGAATCCTTCCGCAATTTCTTGATGACTTTTTTCCTCCACAAGATGTAATGAATAAAGTTATTGGAGAATTTCTATCCAATCAGCAGCCTTATCCACAATTTATGGCAACAGTAGTTTATAAGGTAATGT ...........:..x.......x......:.....:......x.:.....x..x..:.....x..:.....:..:..x..x..:..::.x.....:.....:..:.....:.....:.....:........x..:..x..:..:.....x..x..:..x........:.x.. 172M 135/172 78.5% 172/94230402 0.0% 0/172 0.0% -5845975 -88384427 +10687 chr4 + 190214555 3238809 3238808 3238985 177 TCCTTGCAGGTGTTTCAGACTCTGCACAGCACCGGGCAGTCGTCCATGGTCCGGGACTGGGTCATGCTGTCCCTCTCCAACTTCACGCAGAGGGCCCCGGTCGCCATGGCCACGTGGAGCCTCTCCTGCTTCTTTGTCAGCGCGTCCACCAGCCCGTGGGTCGCGGCGATGTATCCT chr4 - 94230402 9085201 9085200 9085377 85145026 85145025 85145202 177 TTTTTGCAGGTATTCCAGACACTGCATACCACTGGACAGTCCTCAATGGTTCGTGACTGGGTGATGCTGTCTCTCTCTAATTTCACACAAAGGACACCTGTGGCAATGGCAATGTGGAGTCTTTCCTGTTTTTTTGTCAGTGCTTCCACCAGTCAATGGATTTCAGCAATGTATCCT .::........:..:.....x.....:.x...:..:.....x..x.....:..x........x........:.....:..:.....:..:...:.x..x..x..x.....x.:......:..:.....:..:........:..x........:.x:...:.:x.:..:......... 177M 137/177 77.4% 177/94230402 0.0% 0/177 0.0% -5846392 -88384010 +13404 chr4 + 190214555 3239828 3239827 3240067 240 CCTTAACTCCTGCACCAGCCTCCCACATGTCATCAGCAGGATGGGCAAGCTGGAGCAGGTGGACGTGAACCTTTTCTGCCTGGTCGCCACAGACTTCTACAGACACCAGATAGAGGAGGAGCTCGACCGCAGGGCCTTCCAGTCTGTGCTTGAGGTGGTTGCAGCCCCAGGAAGCCCATATCACCGGCTGCTGACTTGTTTACGAAATGTCCACAAGGTCACCACCTGCTGAGCGCCATG chr4 - 94230402 9086122 9086121 9086359 85144044 85144043 85144281 238 CCTTAACT--TATCTCAGTCTTCCACATATTATCAGCAGAATGGGAAAACTGGAGCAAGTGGATGTTAACATCTTCTGTTTGGTGGCCATGGACTTTTACCGACATCAGATTGATGAAGAATTAGATCGGAGGGCTTTTCAGTCAGTGTTCGAGGTGGTAGCATCTCCAGGAACTCCGTATCATCGCCTCCTAACTTGTTTGCAAAATGTCCACAAGGTCACAGCATGTTGAATGTCCTG ........--.::x:...:..:......:.:........:.....x..:........:.....:..x...x.:.....::....x....::.....:...x....:.....x..x..:..::.x..:..x.....:..:.....x...:.:........x...x.:.......x:..:.....:..x..x..:........:.:..................x:.x..:...::.:.x.. 8M2D230M 181/238 76.1% 238/94230402 0.0% 2/238 0.8% -5846294 -88384108 +23556 chr4 + 190214555 3249000 3248999 3249548 549 GCCGCAATATTGATGGCCCGTCAGTGCAGCCCTGATTCCTGTGCTTTCAGTTAAAAGGTTTCTGTTGTTGTAGCTTATGCAGTTGCTCTGTTGCTATGGAAACGTGACATCAAAATGACGTTTCCC-GTTTAAAAGCTTTTAACTAAATTCCTGCCTGTCAGATGTAGGCCCCATTTTGAGCGTGGAGCTGCCTTCGAGCGAGCGTGAGCGG-----------------------------CGCCTCCCGCCCATG-GTGCGTGGGGCCG----GGCCGGGGC------------CCTCGCTGAGCGCGCTCTCTCA----CCCCACAGGCGCCTCCGGCATGGCGGCGGCCGAGGGGCCCGGCTACCTCGTGTCTCCCCAGGCGGAGAAGCACCGGCGGGCCCGCAACTGGACGGACGCCGAGATGCGCGGCCTCATGCTGGTCTGGGAGGAGTTCTTCGACGAGCTCAAGCAGACCAAGCGCAACGCCAAGGTGTACGAGAAGATGGCCAGCAAGCTCTTCGAGATGACCGGCGAGCGCAGGCTGGGCGAGGAGATCAAGATCAAGATCACCAACATGACCTTCCAGTACAGGTGGGC chr4 - 94230402 9121952 9121951 9122548 85107855 85107854 85108451 597 GCTTTAATATTGATGGCCTGTCAACTTTGTCCTGATTCTTTGGCTTTCAGTTAAAAGGTTTTTGTTGTTGTAGCTTATGCAGTTGCTCTGTTGCTATGGAAACGTGACATCAAAATGACGTTTCTCTGTTTAAAAGCTTTTAACTAAATTCCTGCCTGTCAGATGTAGGCCCCATTTTGTGCACT---CAAGCTTCAAGCTGTTGCAAAAAGGTTTCATATGTTCTGTTGTCATTCAAATTCTTTATCCACATATGCATGTCTTGCACTACAAAAACCTAAGCTAAAAACTCAATCTATATTAAGTGTCCTCTTTTAAAACCCTTTTAGGTCAGTCAGCAATGGCTGCAGCAGAAATTCCCAGTTACATTGTCTCTTCTCAGACTGAGAAACACAGGAGGGCCAGAAACTGGACTGATGCAGAAATGAGAGGTTTAATGCTGGTCTGGGAAGAATTTTTTGATGAACTGAAACAAACTAAAAGGAATGCCAAAGTTTATGAGAAAATGGCTAACAAACTCTTTGAAATGACGGGAGAAATTCGCCACGGAGAGGAAATAAAGATAAAAATTACAAATATGACATTCCAGTACAGGTAAGC ..:x:.............:....::x:x.:........:.xx...................:..............................................................:.-....................................................x..::x---.x:x....:...x:x:.::.:x:.-----------------------------.x::x:..:.x:...-:..:x.x.x:.::----::..x::..------------.:x:::.:..:.:x....:.:.----..::x:...:xxx..x.xx.....x..:..x..::xx...:.:...x.:..x...:.:...:.x.....:...x..x.....x.x........x..:..x..:...x.x..::.x..............:..:..:..:..:..:..x..:..:..:..:x.x..:.....:..x..:.....:.....:.:...:.....:..:.....x..x..:xx:x.x.xx..x.....:..x.....x..:..:..x..:.....x.............::.. 126M1I58M3D24M29I15M1I13M4I9M12I22M4I279M 397/546 72.7% 597/94230402 0.0% 54/546 9.9% -5872952 -88357450 +13672 chr4 + 190214555 3253190 3253189 3253524 335 TGTGTCTCTCGTTTCAGGAAATTAAAATGCATGACAGATAGCGAGTCCGCCCCGCCCGACTGGCCCTATTACCTAGCCATTGATGGGATTCTGGCCAAGGTCCCCGAGTCCTGTGATGGCAAACTGCCGGACAGCCAGCCGCCGGGGCCCTCCACGTCCCAGACCGAGGCGTCCCTGTCGCCGCCCGCTAAGTCCACCCCTCTGTACTTCCCGTATAACCAGTGCTCCTACGAAGG---------CCGCTTCGAGGATGATCGCTCCGACAGCTCCTCCAGCTTACTGTCCCTTAAGTTCAGGTAGTGTGTCTGCTTGTCCTTCCCCTGCCCTGGGGTATCTCA chr4 - 94230402 9131258 9131257 9131598 85098805 85098804 85099145 341 TATGCCTTTTCTTGCAGGAAATTAAAATGCATGACTGACAGTGAAACTGTTGCACCTGACTGGCCTTACTACAAAACCATTGATAGGATCTTATCCAAAGTGACAGACCACAGTGATGTGAAAATGCATGAAAATCAGCAACCAGGTCCTTCTACATCACAGACAGAGGCCTCGCAGTCACCATCAGCTAAGTCCACGCCTCTGTATTTGCCATATAATCAGTTTACATACGAAGGAAGGGAAGAATGCTTTGAAGATGAACATTCAGAGAGCTCATCAAGCTTACTTTCTTACAAGCTGAGGTA--GCATCTAATT-TTTTTCCCCTACTTTTTAGTATTTCA .:..:..:.:x..x.....................x..:..:..:x.:.::x.:..:........:..:...xx.:........:....::.:x....:..xx.x..x:x.x......xx...x...xx..x.::....x:..:..x..:..:..:..x.....x.....x..x.x...:..::.x...........x........:..x..:.....:....x:x.x........---------x:....:..:.....x.::..x..x.....x..x........x..::x:...:.x.....--.::...:x..-.::.......:.::.xx:....:... 236M9I60M2D10M1D26M 233/332 70.2% 341/94230402 0.0% 12/332 3.6% -5878068 -88352334 +10845 chr4 + 190214555 3255719 3255718 3255965 247 TTCCAGGTCGGAGGAGCGGCCGGTGAAGAAGCGCAAGGTGCAGAGCTGCCACCTGCAGAAGAAGCAGCTGCGGCTGCTGGAGGCCATGGTGGAGGAGCAGCGCCGGCTGAGCCGCGCCGTGGAGGAGACCTGCCGCGAGGTGCGCCGCGTGCTGGACCAGCAGCACATCCTGCAGGTGCAGAGCCTGCAGCTGCAGGAGCGCATGATGAGTCTGCTGGAGAGGATCATCACCAAGTCCAGCGTCTAG chr4 - 94230402 9137162 9137161 9137408 85092995 85092994 85093241 247 TTTCAGAACTGAAGAAAGACCAGTTAAGAAAAGGAAAATGCAAAGCTGCAGCTTTCAAAAGAAGAAGCTAAAATTAATGGAGGCTATGTTGGAAGAACAAAAGAAGTTGAGCAGAGCTATGGAAGAAACCTGTAAAGAAGTACGCAGGATTCTGGATCAGCAAAACATCATTCAAGTTCAAAGCTTACAGCTACAGGAGAGAATGATGAATCTACTGGAGAAAATGATTTCCAAATCCAATGTGTAG ..:...:x.x..:..:x.:..:..x.....:x.x..::....:......x:.:.x..:......x....:x:::.:x.......:...x....:..:..:x:xx:.:.....x.x..::....:..:.....:x:x..:..:...x.x:.x.....:.....:x.....x.x..:..x..:...:.:.....:......x.x.......:...:.......::..x..:x....:....::..x... 247M 167/247 67.6% 247/94230402 0.0% 0/247 0.0% -5881443 -88348959 +3220 chr4 + 190214555 3274765 3274764 3274835 71 CGGCTTTCTTATGGTATTTTTCCATGGTATTTCTTTTTTTTTTTTTGTTAATTCTTTTACTTTTAACCTAA chr4 - 94230402 41902218 41902217 41902288 52328115 52328114 52328185 71 CGGTTTGGTTTGGGTTTTTTTCCATTGTCTTTTTTTTTTTTTTTTAAAGAATGCTGATATTTTTAATCTAA ...:..xx..xx...x.........x..x...:............x:xx...x..xx..:......:.... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -38627453 -55602949 +88838 chr4 + 190214555 3315958 3315957 3318056 2099 TCTTTCTGTGGTGGTTTTTATTATGAATTATCTTTTTGTGTTTAGC-----TAATACCAGTGAGTGGTGGAGAAAGA------TGGGCTCTTTAATAATGAGCTGTTCGTTTTTCTTTCTT-AGGGCACTGTTTGAAGAAGCAAACATGGTAGCATCAAGCATTCCTTGAAATATGGCTCCAAG-----GGAACAATGAGACGTGCTCTTGGTCTTGGAAGC----TCATCAGAATGTTTAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGGAGGTTGCCCGGGGGAGGGCCGGCTACGGATTCACGCTTTCGGGACAGGCACCCTGTGTGCTCAGCTGCGTCATGAGAGGGAGCCCTGCGGATTTCGTGGGCCTCCGAGCTGGAGACCAGATACTTGCTGTCAATGAAATCAACGTGAAAAAAGCATCTCATGAAGATGTAGTGAAATTAATTGGGAAGTGCTCTGGTGTCCTTCACATGGTGATTGCTGAAGGCGTCGGCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGGGACTCTATGAAGGAAAAGGCTGGCTGAAGCCCAAGCTGGATTCTAAAGCACTAGGTATAAACAGAGCAGAGCGAGTCGTGGAGGAAATGCAGTCTGGTGGAATTTTCAATATGATTTTTGAAAACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTG-------AAACAAAGATCCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTGGACATGAAAGTATAAATAATCCAAATCCCAACATGCTTTCTAAGGAGGAAATATCAAAAGTTATTCATGATGATTCGGTTTTCAGCATTGGACTAGAAAGTCATGACGATTTTGCATTGGATGCAAGTATTTTAAACGTGGCGATGATCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGAGTACCCGGCCGAGAAGCTGGCCTTCAGCGCCGTGTGCCCGGACGACCGGCGATTTTTCGGGTTGGTTACCATGCAGACGAATGACGACGGGAGCCTGGCCCAGGAGGAGGAGGGCGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGACCCAGACTTGTTTAATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACCGAGACATGGGTGAGCTGATTGAGGGCATGCGGGCCCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGTGGACCTGGGTGGGAGCTCGAGCAGACACGGCCCCGGAGGCAGCGCGTGGGACGGTGTGGGTGGGAGGGGTGCCCAGCCCTGGGGTGCTCCCTGGACTGGGCCCTTCTGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCATCAGACTGACAGGTTCTGGGACCTAAACAAGCACCTAGGGCCAGCCTCTCCTGTGGAGGTGCCCCCAGCTTCCTTGAGGAGCTCAGTCCCCCCTTCCAAGAGGGGCACCGTGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAGCGACCAGGACTCTTACACAGATTCCACCGATGGCTGGTCCAGCATCAACTGCGGCACACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCCCCGCTGAATGCCCCGAAGAGGGAGTGGTCCAGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCCCCATCGAAATGTTCGAAAGACTAAGGAAGATAAAAAGGTAAG chr4 - 94230402 9153925 9153924 9155996 85074407 85074406 85076478 2072 TTCTCTTGCAATAGTTTTTGTTAGAATCCACTGATTTCTGAATAGTAAGGGGAATGC---TGGGTACTGAAAAAAGAATGAAGTGAGAT---TAAAAATGTCTTTTTTTCCTTTCTTTCTTTAGAGCTTCGTCAGATGAAGGAC---TGATA------------CTGTGAAACATGGC---AAAACCTTGGACTAATTAAAAGTTTTCCTGTTTGAGGAAAAAGAGCCAACAACATGTATAGACCTGGGGAGACGGTCAAGCGTCGACTCAATATGCATGCCCCTCCTCGAATAAGGAGTGTGGAAGTTGCTAGAGGAAGAGCAGGTTATGGGTTTACCCTTTCTGGACAAGCTCCTTGTATTCTCAGTTGTGTTATGAAGGGAAGCCCTGCAGATTATGTTGGACTTAAAGCAGGAGATCAGATATTTGCGATTAATGAAATTAATGTGAAAAAGGCATCTCATGAAGATGTAGTGAAACTTATAGGAAAATGTTCTGGAGTTCTCCACATGGTCATTGCTGAAGGGATTAGTCATATAGATTCATGTTCAAGTGATGAAGAAGTTGGCTTTTATGATGGAAAGGGATGGCTGAAGCCCAAACCTGACTCTAAAGCTCTAGGTATAAACAGAGCGGAGAAAGTTGTTGAAGAAATGCAGTCTGGTGGCATTTTCAACATGATCTTTGAAAGTCCTAACCTATGTGCTGGTAACACAGAT-------AATTGTGCTCCAAAACAGAGATCGTTTTCAGATTCTGCTGCTATTAAATTTGAAACTGGAAATGAAAGTCTGAGCAATCCAAACC------TACTGTCAAAGGACGAATTATCCAAAGTTCTGAATGATGACTCGGTTTTTAGAGTTGGGTTGGAGAGTGCAGAGGACTTTGGATTAGATGCAAGCATTTTGAATGTTGCCATGATTGTAGGTTACCTAGGCTCAATTGAACTTCCTTCAACAACCTCGAATTTGGAAAATGAGAGCCTGCAGGCTATTCGTGGATGCATGAGACGTCTGCGGGCAGAACAGAAAATCCATTCATTAGTGATGATGAAGATAATGCATGACTGTATTCAGCTATGCAGTGACAAATCAGGTGTAGTGGCAGAATATCCTGCAGAGAAACTGGCATTCAGTGCTGTTTGCCCAGATGACAGAAGGTTCTTTGGACTAGTTACAATGCAGACAAATGATGATGCAAGCTTGGCTCAGGAAGATGAAGGGGTTCTGAGGACATCTTGCCATGTTTTTATGGTGGATCCTGAATTATTTCATCATAAAATTCACCAGGGCATAGCAAGACGTTTTGGACTGGAATGTACAGCGGATCCAGACACAAATGGCTGTTTAGAGTTTCCAACATCATCTTTGCCTGTTCTTCAGTTTATTTCTGTCCTGTATAGGGATATGGGGGAACTGATTGAGGGAATGCGTGCAAGGGCGTTTCTTGATGGTGATGCAGATGTTCATCAGAATAATAGTACAAGCAGCAACAGTGACAGTGGAATTGGAAACTTTAATCAAGAAGAAAAAAATAATAGAGTCCTGGTGGTTGATTTAGGGAGCAATCCGAGTAAACATATTCCT---AGCAGTATATGGGAAAATCCAGTCGGAAGGGGACAAAATCAGTCTGCTGCACACTGGAATGG---CTTCTGTCATGAACAAGAAGGAAACATTCCTTTAGAAGTGAT---TCAGAACGACAAGTCCCAAAATCTAAACAAGCACTTAAGTCCTTCCGCTCGTATTGAAGTTCCACTGGTTTCCTCTCGAAATTCAGTGCCCCCATCAAAGAAAAGCGCTGCAGGCGTAGG---------CAATCAGAGGTGGTTGCCTGTACATGTTTTACAAGAGTGGCAGCATGGAAATGCTAGTGACCAGGAGTCTTACACTGATTCTACGGATGGCTGGTCAAGCGTTAACTGTGGTACTCTTCCCCCTCCAATGAGTAAGATTCCAGCTGACAGATACAGAGTCGATGGCAGCTTTGGTCAGCCGCAGTTAAAATCTCATAAGAATGAATGGTCTAAGAAGATGTTTTGCATGCAAAACAAGTTTGGCCTTCCGCACAGTGTTAGGAAGTCTAAAGAAGATAAAAAGGTAAG .::.::..:::.:......:...x:.x::.::xx...x..xx...:-----x...:.---..:..:x..:.:.....------..:.x.---...x....xx:.x..:x::..........-..:..x::..:x..x....x.x---..:..------------.:x.....:.....---..:-----...x:...x.:.x..x:..:..x.:xx....:x----:..x..:x....x....x........:.xx:...:..:.x.:.xxx.:x..xxx.x..:..xx.::.:x..........:.....:x.:..:..:..x..:..:..:..:..x.....x.....:..x..:...:.x.....:..:..:....::..:........:....x:..x..x..:x:...x.....:......:....x:.:........:..:........:........................:.x..x..:..:..:.....x..:..:........x...........x:.::.:.::x.x..x..x.....x.............xx..x:.:.....x.....:..x..............:.:x..:........x.................:...x:...:..x..:.................x........:.....:.......::..x.:...x.....x:.:..:x....x-------.....-------.....:.....x:.......x..x..:..x.:.x:......x::....x........x.:.::........:.------.:..x..x.....x...x....x......x.xx.......:........:..x:....::.:..:...xxx..x..:....x...:........:.....:..:..x..x.....:..:..:...:.......x.....:........x..:.x...x..::....:xx:..x...:....:..:..:..:..x......x.:..:...........:...........:..::.:....:x........x.....:......:.x.....:x...x......:x.x..x..x.....x..:..:..x..x.....:.....x.....:..:..x.....:..:...x.:x.:..:..:..::.:.....x........:.....:..:.x:...:....:.....:..x..:..x.::...x....x..:.....:..x..:........:..x..x..:...x....:..:..:.....:.....x..xx.:..x.....::.x..:..:..:..x..:........x.........:.:..:..:..::.:..x..::.x..:..:..x.....:..:...........:x.:..:.....x..:...........x.....x..xx.x..x.....x..:..x..:..x....::..:.....:..:..:..x.................:..x.....:.....:x.:..:..:..:..:.::..:x.:.....x.....x..::.:..x:.x.:::....:.:...::x:..:---:....::::.....x::.x::.x:..:.....xxxxx.x.xx.xx.x...x.x.....x...---........xx..x.xx.....:.:.x::..x..x..:.:x::---.....x:....:..:.::::.:............:..:.x..xx..x...x.:.x..:..x..x.::.:.....:xx.:.::.....x.....x..x....:::..:.:.::..:.:x..---------...:...x.x...:.x..x..x..:..x:.x.::.........:::...x.::.:..:........x........x.....:..x...........x...:.:.....:..:..x..x........x.....:.....:..x..x...x.x.....:..x..x........:.xx.....x.x.:.:..xx.:.xx....:x..:.....:.:....::x...x.x.......:..xx.....:.::.xx.:x.:....x.:...x....:................. 46M5I6M3D17M6I6M3D29M1I22M3D5M12D14M3D3M5I33M4I494M7D5M7I73M6D779M3D62M3D42M3D120M9D288M 1453/2044 71.1% 2072/94230402 0.0% 83/2044 4.1% -5837967 -88392435 +3205 chr4 + 190214555 3323847 3323846 3323889 43 AGTAGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629057 81629056 81629099 12601304 12601303 12601346 43 AGCACTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..:.x.x..........:.......x................. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -78305210 -15925192 +3139 chr4 + 190214555 3323852 3323851 3323891 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -15658463 -78571939 +3353 chr4 + 190214555 3323854 3323853 3323893 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -15658461 -78571941 +3316 chr4 + 190214555 3323856 3323855 3323891 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -78305208 -15925194 +3567 chr4 + 190214555 3323856 3323855 3323895 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -15658459 -78571943 +3102 chr4 + 190214555 3323858 3323857 3323893 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -78305206 -15925196 +3353 chr4 + 190214555 3323858 3323857 3323897 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -15658457 -78571945 +3139 chr4 + 190214555 3323860 3323859 3323899 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -15658455 -78571947 +3618 chr4 + 190214555 3326322 3326321 3326394 73 CTGTAACCTCAAACTCTTGGACTCAAGGGATCCTCCCGCCTCAGCCTCCCAAGTAGCTAGAACTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..::.:..:x..:..::...::.....x.x.:.x.xx.x........::.........:........x..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -14870804 -79359598 +7474 chr4 + 190214555 3342903 3342902 3343066 164 AGAATAACCTGATGCCTTTTTTCT-TCGTGTTTAGGGCTCAAAATTTGGGCGGGGAACTGGACTCACTCAG---CCTTCTCAACGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAGAGATTCAGTATCACTCGCTCCCTTGATGATCTTGAGGTAATTTAATTTT chr4 - 94230402 9168925 9168924 9169090 85061313 85061312 85061478 166 AGAACGATC--ATGTATGTTTTCTGTTTTGTTTAGGGTGCAAAATTTGGACGTCCGATGGGATTAAATCAGGCTCCTCCACAGCGTTCTTCTGTTCGGAGATCATTTGGGAGATCAAAGCGATTCAGTATTACTCGTTCGCTGGATGACCTGGAGGTAATTGACTTCT ....::.:.--...:x.x......-.:x.........:x..........:..xxx:.:x...:.x.x....---...:.x..:..:x.x....:.....................x...x..........:.....:..x..x.....:..x.........x.x..:. 9M2D13M1I46M3I94M 124/162 76.5% 166/94230402 0.0% 6/162 3.7% -5826022 -88404380 +3035 chr4 + 190214555 3355796 3355795 3355844 49 AAAAAAAAAAAAAAAAAAAAAGGAAAAAAGAAGAAAAAGAAATTCCAAA chr4 - 94230402 49250049 49250048 49250097 44980306 44980305 44980354 49 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAA .........:..........::.:x::............:..xx..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -45894253 -48336149 +3059 chr4 + 190214555 3355798 3355797 3355848 51 AAAAAAAAAAAAAAAAAAAGGAAAAAAGAAGAAAAAGAAATTCCAAAGTAT chr4 - 94230402 51634638 51634637 51634688 42595715 42595714 42595765 51 AAAAAAAAAAAAAAAAAAAGGCAGCAACAACAACAAAAAAATCCAGAGTAT .....................x.:x..x..x..x..:...x....:..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -48278840 -45951562 +4802 chr4 + 190214555 3359069 3359068 3359414 346 CCCCTCTTCCTCCACCTCCCCTCCTCCCTCTCCTCCTCACCTCCCCCTCTTCCTCCTCCTCCCCTCCTCCCTCCCCTCCCCTCCCCCTCCCATCCCCCCTCCTCCTCCCTCCTCCCCCTCC--TCCCCCTCCTCCTCCTCCCCTTCTCCCCCTCCTCCTCCCCTTCTCCCCCTCTTCCTCCTCCCCTTCCCCTCCACCTCCTCCTCTCCCTCACCCTCCTCCCTCTCCTCTCCCTCCTCC-----CCTTCTCTTCCCCCTCCCCCTCCTCCCCCTTCTTTCCT----CCTCCCCGTTCCCCACCTCCTCCTTCTCCCCCTCCCCTTCCTCCTCCCCCTCCCCCTCCTCCCCCTTCTC chr4 - 94230402 43482019 43482018 43482369 50748034 50748033 50748384 351 CCCCTCGGCCTCCCCTTGGCACTGGCCCTGCTCTCCCCACATGTGCCTCTGCACCCTACACCCCTCCTGCCTACCCTGTCCTCTGTTCTTCATCACACACCCTGTGATCTTCTGCCCCCACAAGCTCCCTGCTGTACCTCTCATGCTACCC--CATCACCACCTGCACCCCTTGGTCACCCATATACTCCCTTCTTAC-ACTCTTATACTGCATACTACTTCATCCTGTGTACTGCACCCACAGGCCTTCTTTG---CATTACCAACCCCACACTGCACCCATGGAGCCCTGCTGAACCCTGCCTCCTCCCTGCACCCCACCAGTTGCTGCCCCTGCATCCCCACATCCCCTTCCCC ......xx.....x.:.xx.x::xx....x::....:...x.x:x.....x.x:...x.x........x...x....x:....:x:::::....x.x.x:...x:xx:..:..x....:x.--x.:....x..x:x....:.x.x..x...--.x..x:.x...x.x....:.xx..x:..x:x:x:....:..:xx.-x...:.x.x.:x..:x..x..:.x..::x.x.x.:x.x:..-----......:.x---.x.:x..xx..:.x.x..x.x::.x.----..::x.:.xx...::........:.x:x....x..xx..x..x.:..:x.x:....x.x.....:.:.:. 121M2I28M2D45M1D41M5I9M3D26M4I70M 199/340 58.5% 351/94230402 0.0% 17/340 5.0% -40122950 -54107452 +3239 chr4 + 190214555 3359120 3359119 3359204 85 CCTCCTCCTCCCCTCCTCCCTCCCCTCCCCTCC--CCCTCCCATCCCCCCTCCTCCTCCCTCCTCCCCCTCCTCCCCCTCCTCCTCC chr4 - 94230402 23891361 23891360 23891447 70338956 70338955 70339042 87 CCTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCC .....:xx.:x.:.:.x.:......x....x..--...:....:........:.:....:::.x:::.:.:..:::::...:.:... 33M2I52M 54/85 63.5% 87/94230402 0.0% 2/85 2.4% -20532241 -73698161 +3158 chr4 + 190214555 3359158 3359157 3359248 91 CCATCCCCCCTCCTCCTCCCTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCCTTCTCCCCCTCCTCCTCCCCTTCT------CCCCCTCTTCCTCCT chr4 - 94230402 77208611 77208610 77208707 17021696 17021695 17021792 97 CCTTCCTCACTGCCTCTTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTTTGCATTTAGAATCTCCCCCCATCCTGCT ..x...:.x..x.::..:.:x.:......:.............x.x:xxx.:.:..:.....:.:...::x.x.:.------:....:.x....x.. 76M6I15M 60/91 65.9% 97/94230402 0.0% 6/91 6.6% -73849453 -20380949 +8669 chr4 + 190214555 3370012 3370011 3370330 319 TAGAGGAAATAGTTTAAAAATGATCTCACAGCGTGATTTATGTAAA-CGGCGCTTCTTTCTTTGGATGAGACAATTGAGATAGAGTCTGAAACCCTGGCAAGCCACAGCTTCCTGCAGTGTCCTGTTGCCATGGGTTAC--GAAGGGAGCGAGAGGGAACTTCATCGGAAATGCCTTTAAACTTTTCTCACACGCACAAGC----TGCGGTGTTGAATGGTGTGTCTTAGAC---------CCGGGTGCCTAGTG------TGGCTCGGTGCC---TTACAATGAATTTGGGGAAAGAGTTGTC---AAACGAAACCCATGTTTCTAATGACCAGCAGGTAAGTAGT chr4 - 94230402 9183867 9183866 9184203 85046200 85046199 85046536 337 TATAGGAAACGCTGTAAAATC----------CTTGATTTATATAAAACGATCTAGCTTTTCAGGGGAGAGATAATTGAGATCTAATCTGAATCCCTGACGAACCACAGCTTCCTGCATTGGCCTGTTGCTATGGGTAACATAAAGGGAGTAAAATAGAACTTCATACGAAATGCCTTTAAACTTTACTGGCGTGTACAGGCATGGAATAGGGCTGAATTTTTTAGTTTAATCTTTGCAAAGCCGATTTGCTAAGGAAATGCTTTTTCCGTATTAAGTGAAGATGAATTTAGGAAGAGTACTGTTAGGAAAAATAACTGCTGTTTCTTATGAAGAGCGGGTAAGTGAT ..x......::x.x.....x:----------.x........:....-..::x:xx....::xx..:x....:.........xx.:......x.....:.:.:...............x..x........:......x..--:.......::.:.x:.........xx..................x..x:.::.:...:..----x:::.x.:.....xx.x.:x:...:x.---------...:x.xx...:x.------.xx:..x..:::---.x.x:........:..:.:..x::...:---...x:x...:xx.......x....xx...:.......::. 21M10D15M1I92M2I60M4I27M9I14M6I12M3I28M3I40M 212/309 68.6% 337/94230402 0.0% 38/309 12.3% -5813855 -88416547 +4187 chr4 + 190214555 3386370 3386369 3386475 106 TGTCATGAGGCTTAATTAACTCATGTCTCTCTCTCTTTTCTTTCAGTCTGCAACTGTGTCTGATGGCGGTAAGTCACAATTTCTGATGTATATATTTTTTATTTTT chr4 - 94230402 9189767 9189766 9189860 85040543 85040542 85040636 94 TATCATGAAACTTAAGTAACGCTTATTTTTCTCTTTCTTATTACAGTCAGCAACTGTCTCTGATGGAGGTAAGCTGAAGCTT------------GTTTTTACTTTT .:......::.....x....x.x.:.:.:.....:.:..x..x.....x........x........x......:::x.::..------------x......:.... 82M12D12M 70/94 74.5% 94/94230402 0.0% 12/94 12.8% -5803397 -88427005 +3540 chr4 + 190214555 3394238 3394237 3394320 83 CTACAACCTCTGCCTCTTGGGTTCAAGTGATTCTTGTGCCTCAGTCTCTCAAGTAGCTGGTATTGCAGATGTACACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG .....:..:xx:x..::............x...x::x.x.....:..:............x.:.:.--.:..:......:::. 66M2D15M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -14802888 -79427514 +9003 chr4 + 190214555 3407196 3407195 3407596 401 TAGCTGTGCTC-GGCCCGCCTTCAATAATTCAGGCTCCGT-GGCGGCAGCAGCTGAGGGGCTG--CTGTGAATTATGCATGCGTC-TTCGGCAAGGCTTCGTGCGACGTCTCCTGTTGGCTTCCCATCCGTGAGCCTGCGTGCAGGCAGGGCAGAGCCGTCTT------TGTCAGCCGTGTGCTGGGATCGCGGGAGAAACTGCAATAATTGGCCT---CCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCCGCCCGGGCTCTGCCGGCTGACCCTGGTATGGACTCAGAGGGGTGGTTTGCAGTGCATGGTTGGAAGTATTTGGTTAAGTGGCATCACAGTGGCTCTTATCAGCTCTACCCAGGTAAAGTCCCTTGTCCCCATCTG chr4 - 94230402 9193011 9193010 9193421 85036982 85036981 85037392 411 TAGCTGTGTTCCAGAGTAGCATAAATAATTCAAGTTCCTTTAGCAGCAGTGGCAAAAGGTCTTTTCTTTAAATTATTTATGCAGCATTTTATAGTGCTTAGTGTTAAGTATACTATTGGTTTCCTCTGCTTGAAGCCATGGGGGTGAAGAATCGATTTGTTTCGAATGGTGTAAAAAGCTACCAGGAATTGCTGAGGAGAATGCGTTAGCTTCCCTTATCCCAAAGCTGCAG----AGGAACAATGTGCTGGGCAGTGAGAGCAACCTTCACCCAATGGGTTCCGGGACATTACAGTTGAACTTGGTATGGATTCAGAAAGATGGCTTGCACTGAATGCCTTGAAGTATTTGATTAAGTGGCACCACTGTGGTTCCTATCAGCTTTATCCAGGTAATGTACTTAGTTATTAACTG ........:..-:.xx::x.x.x.........:.:...x.-:..:....::..x:.:..x..x--..x.:......x:....:x.-..:x::.:x....x...:x.x..x.x..:....:....:x.x.x...:x.:::.x.x:x.x..:::x..x::..:.:------...x.:xx.:xxx.x..:..:..x.::..:.x...:x..::.xx...---..:::::x..:::----....:......x.:x.xxx.x..x:xx::....::.:.::x.xxx:.....x:x.xx.:.:...x.:.........:.....::.:...:.....x..x...x:.x..........:..........:...x....:..:........:..:........x..x.:.x..:x::.x... 11M1I28M1I22M2I20M1I77M6I47M3I13M4D179M 243/397 61.2% 411/94230402 0.0% 18/397 4.5% -5785815 -88444587 +9739 chr4 + 190214555 3414052 3414051 3414255 204 TGTCTGTGCTGGTCCCG---CAGAGTTGACGGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACTTCTCTGTGAGTAGGGAAGG chr4 - 94230402 9196897 9196896 9197103 85033300 85033299 85033506 207 TGTTTTTGTTTGTTTTGTAACAGAGCTGAATAGTGCTGATTTAAAAGACTGCATCAGTGAAAACAGTCTCAGTAGCAATGCTAGTCTTCCCAGCGTTCAGAGCTGTCGACGACTTCGAGAAAGAAGAGTTGCAAGCTGGGCAGTTTCATTTGAGCGACTTCTTCAGGATCCTGTTGGTGTTAAGTATTTTTCGGTAAGCTTGGAAAG ...:.x..:.x..:::.---.....:...xx:.:..:..::.:..:......:....::.x.....:..x..:........:..:..:........x........:..:..x..x..x..:..:..:..:..x........x..x..x........x..x..x.....:..:..:.....:x:x..:..:..x..:..:xx....:. 17M3I187M 145/204 71.1% 207/94230402 0.0% 3/204 1.5% -5782845 -88447557 +8737 chr4 + 190214555 3414723 3414722 3414855 133 TTAATAAATGGTGTCTTTGTCTTTCTTAGGATTTTCTAAGGAAAGAATTCAGTGAAGAAAACATTTTATTCTGGCAGGCCTGTGAATATTTTAATCATGTTCCTGCACATGACAAAAAGGAGGTAAGTCCACG chr4 - 94230402 9200136 9200135 9200268 85030135 85030134 85030267 133 TTAATTATTTGTTTATTTTTCCCCCTTAGGAATTTCTGCGGAAGGAATTTAGTGAAGAAAATATTTTATTTTGGCAGGCTTGTGAATATTTTAATCATGTACCCGCACATGATAAAAAAGAGGTAAGTCAATG .....x.x.x..x.x...x..:::.......x.....:x....:.....:...........:........:........:....................x..:........:.....:..........x.:. 133M 110/133 82.7% 133/94230402 0.0% 0/133 0.0% -5785413 -88444989 +10164 chr4 + 190214555 3415967 3415966 3416131 165 TTTCCTGTCAGCTTTCCTACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCAGCAAAGCCACCACCCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGACGACGTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGCAGGTAACCGCAG chr4 - 94230402 9201196 9201195 9201359 85029044 85029043 85029207 164 TTTTCTG-CAGCTTTCTTACAGAGCTCGGGAGATCTTCAGTAAATTTTTGTGTAGCAAAGCTACAACCCCTGTTAATATTGATAGCCAGGCACAGCTGGCAGATGATATTCTCAATTCTCCACATCCAGATATGTTCAAGGAACAGCAACTTCAGGTAACCACAG ...:...-........:.....:..:........:........:...:.x..:........:..x.....x..:..:..:..:........x.....:.....:..::.:...x::x.x..x..:.....:...........:.....:..x.........:... 7M1D157M 130/164 79.3% 164/94230402 0.0% 1/164 0.6% -5785229 -88445173 +10840 chr4 + 190214555 3416896 3416895 3417099 204 TTACATCTTCTCCCCAGATCTTCAATCTCATGAAGTTTGATAGCTACACTCGCTTTCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAAAAAAGGTGACCT chr4 - 94230402 9204613 9204612 9204816 85025587 85025586 85025790 204 TTGCATTTCAATTTCAGATTTTTAACTTGATGAAGTTTGATAGCTATACTCGCTTTCTCAAATCCCCCCTTTACCAAGAATGCATCCTAGCCGAAGTTGAAGGTCGGACTCTTCCTGATCCACAGCGTGTTCCCAGCAGCCCCACTTCTAAACACAGTATTAGTTCAGAGAAGTCCAATATCTCAACACCGAAAAAGGTTACTT ..:...:.:xx:::.....:..:..::.x.................:...........x..:.....x..x.....:...........:..x.....x..:..:..x:.x..:..x..::.:....:x..:...........x:....:..:.....:x.::.......xx.x....:.:.x..x..:..:........x..:. 204M 150/204 73.5% 204/94230402 0.0% 0/204 0.0% -5787717 -88442685 +7883 chr4 + 190214555 3417357 3417356 3417548 192 TGTTTTAACCAAGG--TTTCCATTTGATGACAGTTAAGTGGAAAATCAAAATCCGGCCGATCCCTGAATGAAGAGCTGGGGGATGAGGACAGCGAGAAGAAGCGGAAAGGCGCGTTTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGACGGTTTGTG chr4 - 94230402 9205932 9205931 9206125 85024278 85024277 85024471 194 TGTTCCAGCCAATAATTTGTCTTTTGGTGATAGCTAAGTGGTAAATCAAAGTCAGGAAGATCCTTAAATGAAGAGTCAGGAGAGGAGGATACTGAGAAGAAAAAAAGGGGGACGTTTTTCTCATGGTCAAGAAGTAAGAGTTTGGGAAAGTCACAGAAGAGAAAGGAAAATGGTGATTATCCAAATGGTGAGTG ....::.:....x:--..x:.x....:...:..:.......x........:..x..xx.....:.:.........:::..:..x.....:.x:........:x::.::..x:..........:.....:x.:.x:.:...:x:x..:.:...x.....:.::.:...:x.:..x..::.:x..:.:...xx... 14M2I178M 128/192 66.7% 194/94230402 0.0% 2/192 1.0% -5788575 -88441827 +6191 chr4 + 190214555 3422892 3422891 3422985 94 CTCTGTTCCTCAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGTAAGAG chr4 - 94230402 9209885 9209884 9209978 85020425 85020424 85020518 94 CTGTGCCCTGTAGCCACTTGTATTGCACCAAGACAGTAGCATCCTGGAGTCTCGGGACCTACGCTTAGAAAAACGCACTTTATTTCGGTAAGAG ..x..::.:x:....x..x..::....................:.......xx.......:...:.......:.....:..:............ 94M 76/94 80.9% 94/94230402 0.0% 0/94 0.0% -5786993 -88443409 +5130 chr4 + 190214555 3425458 3425457 3425565 108 CCCTAGAGTGGAGAGAAGGAGCCCCTGGACCTTGGCGCCCCTATATCGAGTCTGGACGGACAGCGGGTTGTCTTGGAGGAGAAGGATCCTTCCAGAGGAAAGGGTGAG chr4 - 94230402 9212459 9212458 9212566 85017837 85017836 85017944 108 CTTTAGAATGGTGAGCAGGAACCACTTGATCTTGGTATCCCTATATCTAATCTGGATGGTCAGCGGGTTATTCTAGATGAAAAAGAGCCAACAAAGGGTAGAGGTAAG .::....:...x...x....:..x..x..:.....:::.........x.:......:..x.........:.::.:..x..:..:..x..xx.x.::..x.::...:.. 108M 75/108 69.4% 108/94230402 0.0% 0/108 0.0% -5787001 -88443401 +15837 chr4 + 190214555 3428521 3428520 3428733 213 AAATGAAAGTAGAA--CTTTGACTTTCCTTCTAATGCAGGGAGAGGAAAGAACACTAGGCAAGTCTAATTCTATTAAAATAAAAGGAGAAAATGGAAAAAATGCTAGGGATCCCCGGCTTTCAAAGAGAGAAGAATCTATTGCAAAGATTGGGAAAAAAAAATATCAGAAAATTAATTTGGACGAAGCAGAGGGTATGTGAACTTTTTAAAACTT chr4 - 94230402 9214479 9214478 9214693 85015710 85015709 85015924 215 AAATGTAAGTAGTATACCTTAACTTTCCTTCTAATGCAGGGAGAGGGAAGAACTCTAGGAAAGTCTAATTCTATCAAAATGAAAGGCGAAAACGGAAAAAATGCTAGGGAAGTCCGGCTGTCAAAGAGAGAAGAATCTATTGCAAAGATTGGGAAAAAAAAATGTCAGAAAATAAATTTGGATGAAGCAGAGGGTATGTGAATTTTATATAGCTT .....x......x.--.:..:.........................:......x.....x..............:.....:.....x.....:.................xx:......x...........................................:.........x........:...................:...x..x.:... 14M2I199M 191/213 89.7% 215/94230402 0.0% 2/213 0.9% -5785958 -88444444 +15634 chr4 + 190214555 3430367 3430366 3430930 564 ACTCTCT----AAAACACGGTCACTCTGGGTTTTCTTCCAATAGAGTTTTTTGAGCTTATTTCCAAAGCTCAGAGCAACAGAGCAGATGACCAACGTGGGCTGCTAAGGAAGGAAGACCTGGTGTTGCCAGAGTTCCTCCGTTTACCTCCTGGTTCCACAGAACTCACCCTCCCCACTCCAGCTGCTGTGGCCAAGGGCTTTAGCAAGAGAAGCGCCACAG------GCAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTCCACCAGCCCGGGCTCAGCCTCCAGCCCCCCTGGACCTCCTGGGACGACCCCCCCCGGGCAGAAGTCTCCCAGCGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGACCCTGATGGGGGAGGGGGACATCAGCAGCCCCAACAGCACCTTGCTGCCGCCGCCCTCCACCCCCCAG chr4 - 94230402 9217230 9217229 9217794 85012609 85012608 85013173 565 ACTTTCTGACAAAAACTTGTCAATTTTGGGTTTTTCCCCAATAGAATTTTTTGAACTCATATCCAAAGCTCAAAGTAACAGAGCAGATGACCAACGTGGACTGCTAAGGAAAGAAGACCTTATTCTTCCTGACTTTCTTCGTTTACCACCCACTGGACCAGAACCATCCTCATCTACTCCAACAGGC---CCTAAAGGCCTCAGCAGGC-AAGCTTCAAAAAATGATGAAAAGGATGGATGTACGTCACCGAG--TGGAAAACA---GGAGCCCATACAAAACTACAATGAAAATTCAGTTAAGAAAATGGCTTATTCAGAAAATAAACATAAAGCTGCTTTGACAGCACTCCACAGTCAGAAGAGTTTCAGTGTTCCTTTTAATACTACATTGTCTCCGATTCCACATGCACATGAAAACAGTGCAACAATATGGAAAAGGCAATCAAGAGAATTACAAGCTGAAGGCATACAGATGATAGACGATGAGAATGTGGCAGACTTGACTCTTGTTGCTGAAGGAGATATTAGTAGCCCTAACAGCACTTTGTTACCACCGTCGCCACCACCACAG ...:...----.....x:.x:x.:.:........:::........:........:..:..x...........:..:.......................:...........:........x:.x:.x..x..x..:..:........x..::x.xxxx......:xx..::x:.:......:.x.x:---x.:..:...:.:....:.x-....x:..x.:------.x..x..x:..:x.x:..:.x..x..--...x:.:..---......x:.x..::.xx:..::..x.:::.:x::.xx.:xx:..x:.xxx.xxxx.::xxx.x.::.x..x..xx...::.x.:..x.:.x......xx.::...:.xx..:..:x::...x.x:x...:..x:.::.x.x:..:..x..:::..x:..xxx:..x.....:.....:..xx::...x.:x.:..:.::.....x....:.:.:..x......x.:.....x..x:....:..x:.x.xx..:..:..:..:..:.....:........:...:.:..:...:.x:.xx.x..x... 7M4I176M3D19M1D11M6I26M2D9M3D307M 348/555 62.7% 565/94230402 0.0% 19/555 3.4% -5786863 -88443539 +3269 chr4 + 190214555 3443333 3443332 3443425 93 CCCCCCAGGTGTGCCACAACTCACAACTACGACCGGGACAGGGCCTGGGGCTACTGTGTGGAGGCCACCCCGCCTCCAGGGGGCCCAGGTGGG chr4 - 94230402 9252599 9252598 9252685 84977718 84977717 84977804 87 CTTTCCAGGTGCTCAACAACACGTAACTACGACCGGGACAGGAAATGGGGGTACTGCACGCTG------CTATCCACAGAGCACTCAGGTAAG .:::.......:x.x.....x.::..................:xx.....x.....:::.xx.------.:::.:x...:.x:.:.....::. 63M6D24M 58/87 66.7% 87/94230402 0.0% 6/87 6.9% -5809266 -88421136 +6535 chr4 + 190214555 3444801 3444800 3444998 198 CTGCCCCTCTGCCCGCAGAGCCTGATGAGCGCTGCTTCTTGGGGAACGGCACTGGGTACCGTGGCGTGGCCAGCACCTCAGCCTCGGGCCTCAGCTGCCTGGCCTGGAACTCCGATCTGCTCTACCAGGAGCTGCACGTGGACTCCGTGGGCGCCGCGGCCCTGCTGGGCCTGGGCCCCCATGCCTACTGCCGGTCAG chr4 - 94230402 9272903 9272902 9273096 84957307 84957306 84957500 194 CTACTCCTCTAC----AGTTCCTAATCATCACTGCTATCGTGGCAATGGCACTGAGTACAGAGGTACAGCCAATACGACCATTTCTGGACATAGCTGCTTGCCTTGGAATTCAGACTTACTCTACCGGGAGCTTCATGTTGACAGCGTTGAGAAAGCAGTACAGCTAGGCTTGGGGCCCTTCCCTTACTGCAGGTGAG ..:.:.....:.----..xx...:..x.x.:.....x::xx..x..:.......:....x.x..::::....::..xx.x:::..x..x.x:......:..x.:.....:..x..::.:.......:......x..:..x...xx...x.:x:xx..:.:x.x...:...:....x...:x:x.:......x...x.. 12M4D182M 125/194 64.4% 194/94230402 0.0% 4/194 2.1% -5828102 -88402300 +7488 chr4 + 190214555 3446114 3446113 3446300 187 AGGCC-TGCGGCAGGAGGCACAAGAAGAGGACGTTCCTGCGGCCACGTATCATCGGCGGCTCCTCCTCGCTGCCCGGCTCGCACCCCTGGCTGGCCGCCATCTACATCGGGGACAGCTTCTGCGCCGGGAGCCTGGTCCACACCTGCTGGGTGGTGTCGGCCGCCCACTGCTTCTCCCACAGGTGCAC chr4 - 94230402 9276015 9276014 9276202 84954201 84954200 84954388 188 AGGCCATGTGGGAGAAGACATAAAAAAAGAAGTTTTGTGAGACCTAGGATTATTGGAGGTTCTTCATCTTTGCCTGGATCTCATCCCTGGACAGCAGCTATATATATTGGAGAAAGTTTCTGTGCTGGATCTCTTATTCAGACTTGCTGGGTTGTGTCAGCAGCACACTGCTTTGCTAACAGGTAAAC .....-..:..x..:..:..:..:..:..:.xx..:x..x.:..xx.x..:..:..x..:..:..x..x:....:..x..x..:......x::..x..:..x..:..:..:..x..:.....:..:..:xx:..x:.:..x..:........x.....:..x..x........:x.:x......:x.. 5M1I182M 126/187 67.4% 188/94230402 0.0% 1/187 0.5% -5829901 -88400501 +6323 chr4 + 190214555 3447882 3447881 3448041 160 CTCTTCTGATCAGTCCTGATCCGGCTGAAGAAGAAAGGGGACCGCTGTGCCACACGCTCGCAGTTCGTGCAGCCCATCTGCCTGCCCGAGCCCGGCAGCACCTTCCCCGCAGGACACAAGTGCCAGATTGCGGGCTGGGGCCACTTGGATGAGAGTGAGT chr4 - 94230402 9280817 9280816 9280974 84949429 84949428 84949586 158 CTATTCTG--CAGCCTTGATTAAGCTGAAGAAGAATGGCCAACGTTGTGCCGTCAAATCCCAGTTTGTTCAGCCCATCTGCCTGCCAGAAACTAACACAGTTTTCCCCGATGAGTTCAAATGTCAGATTTCTGGATGGGGACACAAACACGAGAGTAAGT ..x.....--...:.:....:x:............x..xx.x..:......::xx:x..x.....:..x.................x..:x.:::..xx:::.......xx.:::x...:..:......x.x..x.....x...xx:x.:......:... 8M2D150M 109/158 69.0% 158/94230402 0.0% 2/158 1.3% -5832935 -88397467 +7472 chr4 + 190214555 3449234 3449233 3449393 160 CAGGGGGACTCAGGGGGGCCCCTGGCCTGCGAGAAGAACGGCGTGGCTTACCTCTACGGCATCATCAGCTGGGGTGACGGCTGCGGGCGGCTCCACAAGCCGGGGGTCTACACCCGCGTGGCCAACTATGTGGACTGGATCAACGACCGGATACGGCCTC chr4 - 94230402 9284495 9284494 9284654 84945749 84945748 84945908 160 CAGGGAGATTCTGGTGGACCTCTGGCCTGTGAGAAAAATGAAATCTCTTACCTTTATGGAGTCATCAGCTGGGGAGATGGCTGTGGCAGAGTCAACAAGCCTGGAGTATATACAAGAGTAACAAACTATGTAAATTGGATTAATGAGAGAATAGCCCCTC .....:..:..x..x..:..:........:.....:..:.:x:.xx.......:..:..x:.............x..:.....:..xx.:x..x.......x..:..x..:..xx.x..::.x........::.:.....:..:..xx.:...xxx.... 160M 113/160 70.6% 160/94230402 0.0% 0/160 0.0% -5835261 -88395141 +3899 chr4 + 190214555 3450741 3450740 3450909 169 TGATGACTTCCATGATAGGTTTCCTTCCTC-------CCTCCCTCCCTCCCTCCCTTCTTCCTTCCTTCCTCCCTCCCTTCTTCCTTCTTTCCTTCCTTTTCTTCCTTCCTTTCTTCTTCTTTCTCTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTCTTCTTTCTTTCTTCTTT chr4 - 94230402 66025587 66025586 66025756 28204647 28204646 28204816 170 tgacgggtttcaggat----tttctttttcaattttgccttcatctctcacttccttttctgttgtttgtttcccccA--CCGCCACCACACCCTCCCACTTTTCCTGCTCTTCTTCAGCCTGATCGTTCTGTCTCGCTTCTTTACTATTTTCTCCTTCCTTTTTCTTTCCTCTCT ...:.:x..:..x...----..:...::..-------...:.x..:...x..:....:.::x..x:..x:.:..:..x--.:x..x:.x:x..:...:x:.:.....x.::......xx.:.xx..x:...x.:.:x..:::..x:.x:...:.:....:.:........:...:. 16M4D10M7I41M2D96M 100/163 61.3% 170/94230402 0.0% 13/163 8.0% -62574846 -31655556 +3970 chr4 + 190214555 3450760 3450759 3450965 206 TTTCCTTCCTCCCTCCCTCCCTCCCTCCCTTCTTCCTTCCTTCCTCCCTCCCTTCTTCCTTCTTTCCTTCCTTTTCTTCCTTCCTTTCTTCTTCTTTCTCTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTCTTCTTTCTTTCT-------------TCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTTCTTCATTT------TTTTTCTTTCTTTCTGAGACA chr4 - 94230402 28459069 28459068 28459282 65771121 65771120 65771334 214 TTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGT-----------TTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTCAGCCA ...::..x..xx..::x.:x:.x.:.:.:x.x:.....x...x:..:........:....xx:x..:x.-----------..:.x:...xx.....::.::....xx....:x:x.....:...:....x....::...:..:..-------------.x.....:x..xx.:..x:..xx:x..::.x....:....------..::...x:....:.x..x.. 69M11D65M13I40M6I21M 121/195 62.1% 214/94230402 0.0% 30/195 15.4% -25008309 -69222093 +3902 chr4 + 190214555 3450767 3450766 3450900 134 CCTCCCTCCCTCCCTCCCTCCCTTCTTCCTTC----CTTCCTCCCTCCCTTCTTCCTTCTTTCCTTCCTTTTCTTCCTTCCTTTCTTCTTCTTTCTCTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTCTTCTTTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ......:xx.x.x......:.....x.x....----:x::x.......:..:::::..:....::..x:::..:x:x....x..::xx....xxx::...x.:.:.........:.:.:::.x.xx............ 32M4I102M 83/134 61.9% 138/94230402 0.0% 4/134 3.0% -39631120 -54599282 +3551 chr4 + 190214555 3450838 3450837 3450947 110 CCTTCCTTTCTTCTTCTTTCT-----CTCTCTCTTTTTCTCTCTTTTTTCTTTTTTCTTCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTTCTTCATTTTTT chr4 - 94230402 39104425 39104424 39104539 55125864 55125863 55125978 115 CTTGCCCTGCCCCTTCTCCATTGCAGCTTGCTCTTTACATCTCTCTGTTCTTTTTTCTTCATGTGTTTTTGCCATTTTTTCCCCTCACTCTGACCCTTGCTTTCCCTCCTCTTTT .:.x..:.x.::.....::x.-----..:x......x:x.....:.x.............x.x.x.:...x::x...:.::.:...x....xx::...x....:.:..x.:.... 21M5I89M 72/110 65.5% 115/94230402 0.0% 5/110 4.5% -35653587 -58576815 +11350 chr4 + 190214555 3463208 3463207 3463608 401 CCCGCAGGAGAAGGAGCCCCGCCC-----GCGCCGGCCCTGGAGTCGCCGGTG------TCGCCGCCCTGCCCGCGGGCCCGCCCTCCTGGCCCAGCC----CAGGGCCCTGC--GAGCTATTTTGAAAGTGACCC-TGGGCTGGGGCGCCGGGG-------------CGAGCGCGGCGGCGCGGAACCATGACAGAAGATGACCGAGGCGGCGCTGGTGGAGGGCCAGGTCAAGCTGCGGGACGGCAAGAAGGTCGGGG-------------------------CGCGTCGGGGGCGCGGGGGGGGGGG----------------------GCGCGGG----------------------CGCGGGCGGCGGCTCACGCTCCCC-----CCTGTCCCCGCAGTGGAAGAGTAGGTGGCTGGTGCTGCGGAAGCCGTCGCCCGTGGCAGGT--GAGCGGGGCGG---GCGGGGGAC----------GGGGGGCGCGGGGGTAGCGACACGGGTTACCGAGG chr4 - 94230402 9289376 9289375 9289896 84940507 84940506 84941027 521 CCCTCAGCCGGAgccggcccggcccctacgcggcggggcggggggcgccggggagggccgggcagcgctggccgctcgcccgccgcgcTCGCTGTGCCTCAGCGGGGACCTACTAAAGCTATTTTGAAAGTGACCCCTCGGCCAGAGCGCGGGGAGGGAGCAGCGAGCCGGGCGCAGCTGTCCGGAATCATGACTGAAGATGACGGATTCCGTGGTGGTGGAGGGTCACGTCAAGTTGAGAGATGGAAAAAAGGTCCGAGCTCCCCTGTGCCCTTTCGGTTCGGCCACGCGGCGGGCACGGGCCGGGGGTCTCCGACCGACGCCCCCTCCTCGCGAGGGGAACAGAGCCCTCTCTTCCCTCCCCCGGCCCTGGCTAACGCTGTCCTTTTGCCTCTCGTTGCAGTGGAAGAGTAGGTGGCTGGTGCTGCGCAAGCCCTCCCCGGTGGCAGGTAAGAGCGGAGCGGGGCGCAGGGAACCCCGTGCCTGGGAGTGTGGGGGGGGAGGGAGACCGGCGGCCGCGG ...x...xx.:..xx.x....x..-----...x...xx.x..:.x......x.------xx..x..x...x....xx.......x:x..x..:xx...----.:...x...:.--:....................-.x...::.:....x...:-------------..:....:..x.:x.....:......x.........x..xx.x.:.x..........:..x......:..x.:..:..x..:......x.:.-------------------------.:..:x.x....:....xx.....x----------------------...x...----------------------.x.x...xx:....x.....x:..-----...x..x::..............................x.....x..x..x.........--......:....---..:...:..----------..:.x.:.x.....x..x..x..x..:x:...x.. 24M5I24M6I39M4I11M2I21M1I18M13I92M25I25M22I7M22I24M5I61M2I11M3I9M10I35M 299/401 74.6% 521/94230402 0.0% 120/401 29.9% -5826168 -88404234 +10862 chr4 + 190214555 3476340 3476339 3476554 215 AGTGCATAGGTTCCATGTGACAGTGGCTCCAGGCACCAAGTTGGAGAGCGGCCCGGCTACCCTGCACCTCTGCAATGATGTCCTCGTCTTGGCCAGGGACATCCCCCCGGCTGTCACGGGGCAGTGGAAGCTGTCTGACCTCCGGCGCTACGGGGCCGTGCCAAGCGGATTCATCTTTGAAGGCGGGACCAGGTGTGGGTACTGTAAGTACGGAT chr4 - 94230402 9295623 9295622 9295837 84934566 84934565 84934780 215 AGTTCATAGATTTCAAGTTTTTGTAGCACCTGGCACAAAACTAGAGAGTGGGCCTGCTACGCTGCATTTCTGCAATGACATTCTTGTCCTTGCAAAAGACCTTCCTCCTAGTGTTATGGGGCAATGGAAACTCTCAGATCTGCGTCGATATGGAGCTGTCCCAAATGGATTCATCTTTGAAGGGGGTACAAGGTGTGGCTTCTGTAAGTACAGAT ...x.....:..:..x..xx:x..:..x..x.....x..::.:.....:..x..x.....x.....::..........::.:..:...:.x..x.::...x.:..:..x:x...:.:......:.....:..x..x..:..x..x..x..:..:..:..x....::.................x..x..x........x.x..........:... 215M 157/215 73.0% 215/94230402 0.0% 0/215 0.0% -5819283 -88411119 +9229 chr4 + 190214555 3485519 3485518 3485672 154 TCTCTGTCCTTCCTCTGCAGGGGCTGGCGTCTTCTTCCTGTCCTCGGCCGAGGGGGAGCAGATCAGCTTCCTGTTCGACTGCATCGTCCGAGGCATCTCCCCCACCAAGGGCCCCTTTGGGCTGCGGCCGGTTCTACCAGGTGCGTGTGGGAGC chr4 - 94230402 9303915 9303914 9304067 84926336 84926335 84926488 153 TTTATGTTCTTTCT-TGCAGGGGCTGGTGTATTCTTCCTTTCTTGTGCCGAAGGAGAGCAGATCAGCTTTCTGTTTGACTGTATCGTCCGCGGCATCTCCCCGACGAAAGGCCCTTTTGGTTTGCGTCCAGTGCTACCAGGTTAATATAGGAAC .:.x...:...:..-............:..x........x..:.xx.....:..:..............:.....:.....:........x...........x..x..:.....:.....x:....x..:..x.........xx:.:.:...:. 14M1D139M 122/153 79.7% 153/94230402 0.0% 1/153 0.7% -5818396 -88412006 +3414 chr4 + 190214555 3490888 3490887 3491033 146 ATTAATTTCTTCCTTCTCTCC-TCTGCTCATTCATTCCTTCCTTCTTCCCCTGCTCATTCATTCCTTCTCCCCCTGCTCATTTCTTCATTTCCCTC-------CTGCTCATTCATTCCTTCCTTCTTCTTCCTGCTCATTCATTCCTTCCTTCC chr4 - 94230402 61964785 61964784 61964934 32265469 32265468 32265618 150 ATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTC--TCCATGCTCCCTGCATCCCCC--CTTATCCAGCACCACCCTCC ....x....:.:....:....-...x...x:::x.:::...:.:.....x....x.:.x.....::::.....xx....x:::.:...:x::....-------..x...--..xx.x..:...x.x..::..--..:..:..x:x.:x..:... 21M1I74M7I6M2D21M2D20M 91/142 64.1% 150/94230402 0.0% 12/142 8.5% -58473897 -35756505 +16150 chr4 + 190214555 3492750 3492749 3493502 753 CTGTCTCAGGGGATGACCGCAGCCTGTCCAGCTCATCCTCAGAGGCCAGTCACTTGGACGTCAGCGCCAGCAGCCGGCTCACCGCATGGCCAGAGCAATCCTCGTCGTCAGCCAGCACGTCACAGGAGGGGCCTAGACCAGCAGCTGCCCAGGCCGCC------GGGGAAG-----------CCATGGTGGGTGC-------CTCAAGGCCACCCCCCAAGCCGCTGCGTCCGCGGCAGCTGCAGGAGGTTGGCCGCCAGAGCTCCTCGGACAGCGGCATCGCCACTGGCAGCCACTCCTCTTACTCCAGCAGCCTCTCGTCCTACGCGGGCAGCAGCCTGGACGTGTGGCGGGCCACAGATGAACTGGGCTCACTGCTCAGCCTGCCAGCAGCGGGGGCCCCCGAGCCCAGCCTGTGCACCTGCCT---------GCCCGGGACAG---------TCGAGTACCAGGTGCCCACCTCCCTGCGGGCCCA-CTATGACACACC-------------------------------------------------------------------------ACGCAGCCTTTGCCTGGCTCCTAGAGA-CCACAGCCCCCCCT--------------CACAGGG------------CAGCC--------------CCGGCAACAGTGCGGCCAG----------GGACTCAGGCGGCCAGACGTCCGCCGGGTGTCCCTCTGGCTGGCTGGGCACGAGACGGCGGGGCCTGGTGATGGAGGCCCCCCAGGGCAGCGAGGCCACACTGCCTGGCCCTGCCCCTGGCGAGCCCTGGGAAGCAGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCGGCATGTCCAGTCTGTGGAGGACTCAAGGTAAACCCCCCTCCTTGAG chr4 - 94230402 9313893 9313892 9314795 84915608 84915607 84916510 903 CTTTTTTAGGAGATGATCGAAGTCTTTCAAGCTCATCTTCAGATACCAGCCACTCGGATGTTAGTGTTGGGAGCAGATTGACAATTTGGCCTGAACA------GTCTTCAGCCAGCACTTCGCAAGAGAGTCATGGACTGGCAGCTGCAAAGGGCATTCATCTTGGGGAAGAAAAGATCCATCCAGAAGGGGCACGTGGCATCACTAAACCACCTCCAAAGCCCCTCCGATCCAGACAGCTACAAGAGATAGGTCGCCAGAGTTCATCTGACAGTGGAATAGCTACTGGTAGTCACTCTTCTTACTCTGGAAGCTTCTCTTCCTATGCTG---GGAGCTTGGACATCTGCCACGGC---GATGAGTTTGGATCATTGCTTAGCCTGCCATTGAACTTTCCTTCGGATCAGAGTTTATGTACTTGTCCTCACAGTGAGCCTCAGAGAGGTGTGGGATCAGAATATCAGGTTCCCAGCTCTCT-CAGACATATTTATGATATACCCAGGAGTTTGTTACAGGCAGCTGCTAAAGATGTGCAACCCAAGAGTGCAGATTCCACGCTACCCAAGGACCAGGCACTGCCTTTTCATGG-TGCTAGTGATCCAAAACTGCTACTTCCACACTTAGAAGCACAGAGGGCACCAGAGCACAGCCAGGACAGAGGGAGGCCGTCATCCTTACGCCCAGAAAGCACCAAAGACTCAACTAATGAGGCGTGTGTGGATTTTGTTTCGAGGTGGTCAGATACAAAACCACCAGGACAGGTGTCAGA---CTCCAAAAGTAGTGAGGTAGCGCCACCTAGTGGAGCCTCAGCTGACCCCTATGACACATGTAGCCCCCACCCTGGGATGACAAGAGCTCTTTTTTCAGCTTGTCCAATCTGTGGTGGACTAAAGGTAAATACCTAACGCTGAG ..x.:.:...:.....:..x..:..x..x........:.....x:....:....:...:..:..:.:::.x...x.::.x..x::x.....x..:..------...x...........x..:..:...:.x.x.:...::........xx...x.:::------.......-----------...x::x...::.-------.x.x.::.....:..x.....x..x..x:.xx.:.....:..:...:.x..:........:..x..x.....:..x..x..:.....:..:.....:........::.x...:....x.....:..x.---.x...:.....:.x..x.:x.x.---.....::.x..x...:....:.........x:::xxxxxx.::.x..x.xx..::.:..:..:..:.:---------...:x:..x..---------:x..:..:.....x....x...:..-.:.:.x:.-:.....:.:...-------------------------------------------------------------------------:.:.x......x.x...-.x....x..-...x.:.:x.:x..--------------.....:.------------.....--------------...x..x.xx.:..x....----------:......:x::::x..:...x:.:x.:x.x.x::..x:.x...:::.::..:.:..x:.x:..x.x....x::..---.:..x.::.:..:....:x:.:.::...:.:xxx...:.x.x:..x....:x..x:..x.::........x.x...x::x.xxx:...:.:.....:..x......:.......x.....x........:x..:xx.x:.... 97M6D55M6I7M11I13M7I128M3D23M3D68M9I11M9I25M1D8M1I12M73I17M1D9M1I14M14I7M12I5M14I19M10I75M3D143M 482/736 65.5% 903/94230402 0.0% 184/736 25.0% -5821143 -88409259 +5622 chr4 + 190214555 3500271 3500270 3500405 135 GTGGACAGCCCAGGACCAGAGAGGCCGCGCGGCGAGTCGCCCACTTACGTGAACATCCCCGTCAGCCCATCCTCCAGAAAGCAGCTGCACTACATGGGCCTGGAGCTCCAGGAGGCCAGCGAGGGTGTCCGAGGT chr4 - 94230402 9346079 9346078 9346213 84884190 84884189 84884324 135 GCGGATGTCCCTACATCAGATCGACCCCACAGTGAGACAGCCACCTATGTTAATATTCCTGTCAGTCCTACTTCCAAAAAACAACTTCATTACATGGAACTGGAACTTCAAGAAGCCAGCACAAGCATAAGAGGT .:...::x...x:x.:....xx.:..x.:.:.:...x.:x....:..:..x..:..:..:.....:..xx.:....:...:..:..x..:.......:x.....:..:..:..:......:x::.::.xx..... 135M 88/135 65.2% 135/94230402 0.0% 0/135 0.0% -5845808 -88384594 +7122 chr4 + 190214555 3500686 3500685 3500825 140 TTTCAGGGGCTGGCGCCTCCCTCTACGCCCAGATCGACATCATGGCCACCGAGACGGCGCACAGAGTGGGGGTGCGGCACGCACGGGCCCGGGAGGAGCAGCTGTCGGAGCTGGAGCAGAGGAAG---GCAGCCCCGCAGTGA chr4 - 94230402 9347666 9347665 9347808 84882595 84882594 84882737 143 TTTCAGGGAGCGGATCATCCCGATATGCACAGATTGACATTGCAGCCACCGAGACAGCCCACAAAGTGGGAACACAGCATGCACAGTGCCGGGAGGAACGCTTGCAGGAGCTGGAGCAGAAGAAGAAAGGAGCTCAGCAGTGA ........:x:..xx.x....xx..:..x.....:.....::::...........:..x....:......::::.:...:....:.xx.........:.:x:..:x..............:....---.x...:.x....... 125M3I15M 103/140 73.6% 143/94230402 0.0% 3/140 2.1% -5846980 -88383422 +3543 chr4 + 190214555 3512973 3512972 3513056 84 TTCAGAGTTCGTTGTGCCGAG---CTCTGGAGATCCTGCCGGACAGGTCCTGCAGATGCTTCTTCACCTGTGGACA-----GAAACGTCTCA chr4 - 94230402 9360367 9360366 9360457 84869946 84869945 84870036 91 TTTATAATTCATTGTGTTGAAGACCTTGAGAGATTCTGCTGGATAAGTCTTGCAAATGCTTCTTTACCTA-GCACAAAAAGGAAACGTATCA ..:.x.:...:.....::..:---..:x:.....:....:...:.:...:....:.........:....:-.x...-----.......x... 21M3I46M1D5M5I11M 63/83 75.9% 91/94230402 0.0% 9/83 10.8% -5847394 -88383008 +8876 chr4 + 190214555 3514738 3514737 3514937 200 GAACCCGTGCGCACCGTGTAGCCCAGCTCCTTGGTCCGCCCCTCCAGCAGGGCGTGCTTCTCGCGGCTGCGGCTCACACGCTCGCCGTCGCCCACGCTCTCTGCGTGCCTCAGCTTCTCGTGCGCAATCTCCAGCTGCTTCTGGTAGTGGTTGTGCTTCTCGATTTTGGCTTCGAAGTGCTTGAGCTCCTCCTGGAACAA chr4 - 94230402 9360754 9360753 9360953 84869450 84869449 84869649 200 GGATTTATACAGACCTTATATCCGAGCTCCTTTGTCTTTTCTTCTAGCATGGCATATTTCTCTCTGTTTCTGTTCAGATGCTCCTTATCTCCAGTCCCCTCTATATGTTTTAGTTTCTCATGTGAAATCTCTAATTGCTTCTGATAGTGATGATGTTTTTCAATTTTTGCTTCAAAGTGTTTCAGCTCCTCCTAGGACAA .:.::::.:.:x...x.:..x..x........x...:x::.:..:....x...:.::.....x.x.:.x.x.:...x.:....x:::..x..x::x.:....:::..::.:..:.....:..:.x......:.::........:.....:.x:..:..:..:.....x.....:.....:..x..........:.:.... 200M 133/200 66.5% 200/94230402 0.0% 0/200 0.0% -5846016 -88384386 +8383 chr4 + 190214555 3518865 3518864 3519007 143 GGGCACCTTCGGTCCTGCTCAGGGTCTCCAGCAGGACGTTGTACTCGTGAACTTTCTCTTTGTGATGCAGGAACTCCCGCCAGAGCTTGTCCAGTTCTTCGCCGGAGAATTTCCCAGAGGTCTTCGCCTAAGAGGGAAACAAG chr4 - 94230402 9362610 9362609 9362752 84867651 84867650 84867793 143 GGACACCTTCAGTTCTGCTCACGGTCTCAAGCAGAATATTGTATTCCCGAATCTTTTCTTTGTGATGTTTAAATTCTCGCCAAAGCTTATCCAGCTCCTCATCTGAGAACTTCCCAGAGGTCTTGGCCTGAAAGAAACATGAG ..:.......:..:.......x......x.....:.::.....:..x:...::..:...........:xx:..:..:.....:.....:.....:..:..::.x.....:..............x....:.:..::.x.::.. 143M 107/143 74.8% 143/94230402 0.0% 0/143 0.0% -5843745 -88386657 +3082 chr4 + 190214555 3529319 3529318 3529430 112 TCTCAAAAAAAACAAAAAAACAAAAAACCAAAAAAACTAAGGACCTATGGCCAAGGACTCCGAGCTCATGGCACCGTGCAGCCCAGGCCAAGAGGTACACGAGTGTGTCCCT chr4 - 94230402 13071475 13071474 13071573 81158830 81158829 81158928 99 TCTTAAACAAAACAAAAAAACAAAAAACAAAAAAAACTTCACAGCTGTAGACAA--AATGTAAGCTC-----------CATTACAGAATAAGAGATACGCTTTAATGTCTCT ...:...x....................x.........xx:x.x..:.:.x...--.x.x::.....-----------..x:x...:x:.....:...:.xxxx:....:.. 54M2D11M11D34M 70/99 70.7% 99/94230402 0.0% 13/99 13.1% -9542156 -84688246 +5073 chr4 + 190214555 3532159 3532158 3532435 277 CACGGCCC-CCGCCCCCAGGCCCCGCTCCACCGAC-CGCG-GGCCGCGCTCACTCGCTGGGCCTTCTCCCACAGCTGGTTCAACTTCTCCATGCGGAACTCCTCTCCGGACTCGCGT--TTCGGGGACGGCTTG-GGCTGGTTCTTCTCCCGCGAGTACTTGCCGCCGTGGCTCGCAGCGGGCCAGGGCCCGAGGAAGAGCAGCAGCAGTAGCAGCGCCGGGAGCCCGCGCAGAAACGACCTGACCCTCCGCGGCGCCATCTTCCTCTGCGACTGGCGCTGCG chr4 - 94230402 9368764 9368763 9369010 84861393 84861392 84861639 247 CGCGGCCCGCCTCTCCTCCGCCTCGCAACAGCTCCTCGCGCTGCCCCACTCACCCGCTGCGCCTTCTCCCAGACCTGATTCAGCCTCACCACCCGGAACTCC---CCGGCCTCCCGCCGCTTGGCGTCAGCCAGCCCCTCGTTGGCCTCCCGGGTGTACTTGC-----TGGCCCG-AGCG---CTGACGGCGAGGAA----CGCGGCAATAACAGCCACAAGCGTCCGCGC--------------------CGCCGCCATATCGCTCCGTGCGCGGAACTACG .:......-..x.:..:xx...:...xx..x.xx.-....-x...x.:.....:.....x...........x.x...:....:.:..x...:x.........---....x...x..:--:.:..x.x.:..:x.-xx..x...xx:......x.x........-----....:..-....---.x.:xxx.......----x..:...:..:....xx.::.x.:......--------------------..x......x.:x...:.:.xx:..x:..:.. 8M1I26M1I4M1I61M3D12M2I15M1I28M5D7M1D4M3D14M4D30M20D32M 170/241 70.5% 247/94230402 0.0% 42/241 17.4% -5836605 -88393797 +3715 chr4 + 190214555 3533454 3533453 3533525 72 CTGCAGCCTCGACCTCCTGGGCTAAAGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTATAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:x:.x..:.....:.x...:.x.:.x.xx.x........::................:.x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -14663672 -79566730 +3032 chr4 + 190214555 3537821 3537820 3537872 52 TCCTGAAGCCTTTCCAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 95677 95676 95728 94134675 94134674 94134726 52 TCCTGAACCACTTCCAATTTTCCTTTTTTTTTTTTTTTTTCCCCTCCTCCTA .......x.x:......:....:.................::::.::.::.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 3442144 NA +3126 chr4 + 190214555 3537831 3537830 3537948 118 TTTCCAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAG--AGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAG chr4 - 94230402 53094174 53094173 53094290 41136113 41136112 41136229 117 TTTCCAAGTTTCTTTTTTTCTTTTTTTTTTCCTGGTTGTTAGTTTGTCTTTCTTAGAGGTGT---GCAGCCAGAGCTCCTTGGTGAGGCTGATGCCAAATATGTGTTGGAAGGTCTGCAG .......x...........:..........::.xx..x..x:..x:..x.....:.:x..x.---....--..:.xxx:....:::..:::xx.xxx....xxx.xx........x.... 62M3D4M2I49M 77/115 67.0% 117/94230402 0.0% 5/115 4.3% -49556343 -44674059 +3009 chr4 + 190214555 3537831 3537830 3537883 53 TTTCCAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGATCATTCT chr4 - 94230402 57221699 57221698 57221751 37008652 37008651 37008704 53 TTTTCAAGGTTCATTTTTTTTCTTTGTTTTTTTTTTTTATTATTCATCTCTCT ...:...xx...x........:...x............x.....x...x:... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -53683868 -40546534 +3309 chr4 + 190214555 3539707 3539706 3539811 105 CAGAGGGAGACCGTGGGGAGAGGGAGACCGTGGGGAGAGGG-----AGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGA chr4 - 94230402 7707263 7707262 7707370 86523033 86523032 86523140 108 CAGAAAGGCATCCTTCAGAGAGGCAAGCCTTTGTCCCAGGGTTTTCAGAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAG--GGAGGGGATGGAGAGGGAGAAAAGGGA ....::.:x.:.x.xx:......x.::..x.x.xxxx....-----....x.::....:.:xx:.....::.:.:......--....:...x...........::..... 41M5I35M2D27M 69/103 67.0% 108/94230402 0.0% 7/103 6.8% -4167556 -90062846 +3091 chr4 + 190214555 3539742 3539741 3539805 64 AGAGGGAGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGGGAGAGGGAGAG chr4 - 94230402 92738400 92738399 92738463 1491940 1491939 1492003 64 AGACGGACGGGGAGAGGTGGAGGAAGGAGAGCGAGAGGAAGATGGGAAGATTGGTGAAGATGAG ...x...x:........x:.....:......x......:...x..::..:xx..x..:.:x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -89198658 -5031744 +3417 chr4 + 190214555 3554653 3554652 3554713 61 CTCCTGGGCTCAAGCGATTCTCCCATCTCAGCCTTCTGAATAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:.....:.x...x.xx:x.........:::.:.......:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -14642486 -79587916 +3203 chr4 + 190214555 3568765 3568764 3568848 84 AAGTACATACATGTAAACTGCACACACAAACTATACACACATATAAATCACACACACAAAGTACACACACATAAACTACACATG chr4 - 94230402 88099480 88099479 88099563 6130840 6130839 6130923 84 AGATAAACACAAGTAAATTTCACTTCAAAAAAATACACAGATTCAAATCACACACAAAAACCAAGAATACATGAAATAAACATG .::..x.:...x.....:.x...x:xx...xx.......x..x:............x...x:.x:x.:....:..x..x..... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% -84530715 -9699687 +3010 chr4 + 190214555 3578306 3578305 3578378 73 TCTTTCTTTCATCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCGTCCATCCATCCATCCACCT chr4 - 94230402 57186229 57186228 57186301 37044102 37044101 37044174 73 TCTATCTGACACAATCCATCCTTCTGTCTTCACCTCTATCCACCTTTTTGTCCCTCCCTCCATCCAACCACCT ...x...xx..:x........x..::..:x:x.x..:.....:.:x.:::...x...x........x...... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -53607923 -40622479 +3129 chr4 + 190214555 3584015 3584014 3584080 66 TAGAATCATCTTGTTAAAGTCTACAAACACACACACACACACACCCATGTGCACACACATGCACAT chr4 - 94230402 4107874 4107873 4107939 90122464 90122463 90122529 66 TAGGATACTCTTACTAATATATGCAGAAACACATTCACACACACCCACGTGCGTGCGTATTCACAT ...:..xx....::...x:.x.:..:.x.....:x............:....:::.::..x..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -523859 -93706543 +3087 chr4 + 190214555 3589850 3589849 3589954 105 TTTATGTGGCACATGACTGTACATGGAAATACACACACACTCACACACATC----CACACACAAGCATATGCATACACACATATATACATGTATATACACGTGCATATA chr4 - 94230402 89016063 89016062 89016170 5214233 5214232 5214340 108 TTCCTGTGGTGC-TGGCAGGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACA ..:x.....::.-..:.x.x.::..x.x.:.:x::..::.x.......:.:----........x...x..........::.x..:.:::..:.x.:..x:.:...:.:. 12M1D38M4I54M 66/104 63.5% 108/94230402 0.0% 5/104 4.8% -85426213 -8804189 +3319 chr4 + 190214555 3589879 3589878 3589955 77 TACACACACACTCACACACATCCACACACAAGCAT--ATGCATACACACATATATACATGTATATACACGTGCATATAA chr4 - 94230402 73121104 73121103 73121182 21109221 21109220 21109299 79 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAA .:..::..:.:...:......x:.....x......--:.:.....::.:.x:..:..:x......:::x..:....... 35M2I42M 53/77 68.8% 79/94230402 0.0% 2/77 2.6% -69531225 -24699177 +3128 chr4 + 190214555 3591813 3591812 3591876 64 ATGTGTATATATATAT-ATATATATATATATATATATATATATACATACACACAATTTTTTTTTT chr4 - 94230402 8681913 8681912 8681977 85548426 85548425 85548490 65 ATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTT ...x:...x:..:.x.-.....x..........:...::.:.:.......:.:..:.:....... 16M1I48M 48/64 75.0% 65/94230402 0.0% 1/64 1.6% -5090100 -89140302 +3071 chr4 + 190214555 3617014 3617013 3617091 78 GTGTGTCATATTGACCTCTCGTCCTTCCCCTCCCC-CTCTTCCCCCTCCTTCCCTCCCTTCTTCCCTCCTGTCCCTCCC chr4 - 94230402 83064543 83064542 83064621 11165782 11165781 11165860 79 GTGCTTCAGTTCTACTCTTAGCCCCTTCCCTCATCACTCTTGCCCCTGCTTGCCTCCCCTCTTCCCTGCTTCTCCTCTC ...:x...xx.:x..:::.x.:..:.:.....x:.-.....x.....x...x......:........x..x::....:. 35M1I43M 54/78 69.2% 79/94230402 0.0% 1/78 1.3% -79447529 -14782873 +3109 chr4 + 190214555 3617637 3617636 3617692 56 CTCCTTTCTTCCCTCCCATCCCTCCCTTCTCCTCCCTTCCCTCCCTTCTCCCCCCC chr4 - 94230402 83554927 83554926 83554982 10675421 10675420 10675476 56 CTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC ...x.......:.:...x.x......::.....:.:....:.:.::...:.::... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% -79937290 -14293112 +3071 chr4 + 190214555 3641549 3641548 3641601 53 CACACACACACACACAAAAAAAAAAAAAAAAAAAAAGAGCGAGAGAGAGAAAA chr4 - 94230402 67652084 67652083 67652136 26578267 26578266 26578319 53 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .....::...x...:.x.x.xx............:....x..........:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -64010535 -30219867 +3185 chr4 + 190214555 3641549 3641548 3641600 52 CACACACACACACACAAAAAAAAAAAAAAAAAAAAAGAGCGAGAGAGAGAAA chr4 - 94230402 67652086 67652085 67652137 26578266 26578265 26578317 52 CACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ...::...x...:...x.xx............:.:....x............ 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -64010537 -30219865 +5632 chr4 + 190214555 3652177 3652176 3652323 147 CTTGGGCAAAAGAAAGGC-TTGCTTTTGAGTAAATTGGTGGCAGACCCCTCTCAGCG---AACTTCAGCCCACTTGCTTTTGGAAAATGACTCTGCGTGTTATTATGTTTTGCAAGACATCAAAGGATGTGGAAAATCCATTATAAATACC chr4 - 94230402 9520350 9520349 9520500 84709903 84709902 84710053 151 CTTAGAAAAAGGAAACATATTGCTTTCTGATGAACTGGCAGGCGGCTTCCCTGAAATCATAACTATGGCTTAATTGCTTTTGAAAAATGACACAATGCAATGTTATATCTTGCAAGACATTAAATGATGTGGAAAATCCATTAGAGATCCC ...:.:x...:....x::-.......:x::.:..:...::.xx.:.::.:..x.:xx---....x::..::.x.........:........x.x::.::x.:....:.:...........:...x..................x.:..x.. 18M1I38M3I91M 100/147 68.0% 151/94230402 0.0% 4/147 2.7% -5868173 -88362229 +3038 chr4 + 190214555 3674996 3674995 3675064 69 CCTTCCTCCCTCCCTCTCTCCCTCCCCTCCTCCCTTTCTCCTTCCCTCTCTCCCTCCCTCCCTTCCTCC chr4 - 94230402 179499 179498 179567 94050836 94050835 94050904 69 CTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCC .:..:..:.:..:....xx..:.:x.x...x.::...x..:..:....:....:..::.:..:..:... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 3495497 NA +3231 chr4 + 190214555 3726099 3726098 3726200 102 GGAGGGAGAGAGACAGGGTGGGAGATGAGAGAGGG-AGGGAGGGAGAGGACAGAAAGAGGAAGGGAGGGAGAGAGAGAGGGAGGGAGAGGAGAGAGAGAAAGG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGA------ATGAGAAAAGGTAGAGAAGCAAGGG---GAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG ....:::.::x....:.:------......:.:..-..:..:.x.::..---....x:..x:x........:..:.....:.:.......:..:.:..x..:. 18M6D11M1I13M3D51M 64/93 68.8% 94/94230402 0.0% 10/93 10.8% -36739676 -57490726 +3129 chr4 + 190214555 3726283 3726282 3726388 106 AGAGAGAGAGGGAGGGATGGAGGGAGAGAGAGAGGAAGGGATGGAGGGAGAGAGAGAGGAAGGGATGGAGGGAGAGAGAGAGGAAGGGAGGGAAGGAGAGAGAGAG chr4 - 94230402 40465768 40465767 40465868 53764535 53764534 53764635 101 AGAGTCTGGAGAAGGGATGACAAGAATGAGAAAAGG-----TAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG ....xxx.::.:.......:x::..:x....:.:.:-----.:...:::x.::.:..::x:..x:.........:..:.......:....:.::.:.:.::x.:.. 36M5D65M 60/101 59.4% 101/94230402 0.0% 5/101 5.0% -36739485 -57490917 +56943 chr4 + 190214555 3766742 3766741 3767995 1254 TACTCGGCGGGCGCGGTGGCAGGGCTGGCTGCCGTGGTGGGCTTCCTCATCGTCTTCACCGTGGTGGGCAACGTGCTGGTGGTGATCGCCGTGCTGACCAGCCGGGCGCTGCGCGCGCCACAGAACCTCTTCCTGGTGTCGCTGGCCTCGGCCGACATCCTGGTGGCCACGCTGGTCATGCCCTTCTCGTTGGCCAACGAGCTCATGGCCTACTGGTACTTCGGGCAGGTGTGGTGCGGCGTGTACCTGGCGCTCGATGTGCTGTTTTGCACCTCGTCGATCGTGCATCTGTGTGCCATCAGCCTGGACCGCTACTGGTCGGTGACGCAGGCCGTCGAGTACAACCTGAAGCGCACACCACGCCGCGTCAAGGCCACCATCGTGGCCGTGTGGCTCATCTCGGCCGTCATCTCCTTCCCGCCGCTGGTCTCGCTCTACCGCCAGCCCGACGGCGCCGCCTACCCGCAGTGCGGCCTCAACGACGAGACCTGGTACATCCTGTCCTCCTGCATCGGCTCCTTCTTCGCGCCCTGCCTCATCATGGGCCTGGTCTACGCGCGCATCTACCGAGTGGCCAAGCTGCGCACGCGCACGCTCAGCGAGAAGCGCGCCCCCGTGGGCCCCGACGGTGCGTCCCCGACTACCGAAAACGGGCTGGGCGCGGCGGCAGGCGCAGGCGAGAACGGGCACTGCGCGCCCCCGCCCGCCGACGTGGAGCCGGACGAGAGCA-------------GCGCAGCGGCCGAGAGGCGGCGGCGCCGGGGCGCGTTGCGGCGG-GGCGGGCGGCGGC---GAGCGGGCGCGGAGGGGGGCGCGGGCGGTGCGGACGGGCAGGGGGCGGGGCCGGGGGCGGCTGAGTCGGGGGCGCTGACCGCCTCCAGGTCCCCGGGGC---CCGGTGGCCGCCTGTCGCGCGCCAGCTCGCGCTCCGTCGAGTTCTTCCTGTCGCGCCGGCGCCGGGCGCGCAGCAGCGTGTGCCGCCGCAAGGTGGCCCAGGCGCGCGAGAAGCGCTTCACCTTTGTGCTGGCTGTGGTCATGGGCGTGTTCGTGCTCTGCTGGTTCCCCTTCTTCTTCAGCTACAGCCTGTACGGCATCTGCCGCGAGGCCTGCCAGGTGCCCGGCCCGCTCTTCAAGTTCTTCTTCTGGATCGGCTACTGCAACAGCTCGCTCAACCCGGTCATCTACACGGTCTTCAACCAGGATTTCCGGCGATCCTTTAAGCACATCCTCTTCCGACGGAGGAGAAGGGGCTTCAGGCAGTGA chr4 - 94230402 9638411 9638410 9639640 84590763 84590762 84591992 1230 TACTCGCCTGCTGCCGTGGCCAGCCTGGCGGCCCTGGTGGGTTTCATCATCGTCTTCACTATCGTGGGCAACGTGCTGGTGGTGATCGCCGTGCTCACCAGCCGCGCGCTGAGAGCTCCCCAGAACCTCTTCCTGGTGTCGCTGGCCAGCGCAGACATCCTGGTGGCTACTCTGGTCATGCCTTTCTCCTTGGCCAACGAGCTGATGAACTACTGGTACTTTGGCAAAGTGTGGTGCAACATCTACCTGGCGCTGGATGTGCTCTTCTGCACCTCCTCCATCGTCCACCTGTGTGCCATCAGCCTCGACAGGTATTGGTCGGTCACGCAGGCGGTGGAGTATAACCTCAAGCGGACACCTCGGCGGATCAAGGCCATCATTGTCACCGTCTGGCTCATTTCTGCTGTCATCTCCTTTCCGCCGTTGATCTCCATGTACCGGGACCCTGAAGGAGATGTCTTTCCCCAGTGCAAGCTCAATGATGAGACATGGTACATTCTTTCTTCTTGCATTGTCTCTTTCTTTGCACCCTGCCTCATCATGGTGTTGGTCTATATCCGTATCTACCGTGTGGCCAAGCTAAGGACCAGGACCCTCTCTGAGAAGCGTAC------GATGCCAGAGGGGTCCTCCCAGACT---GAGAACGGCTTGAGCCGCGCTGC---------------TGGGGGCTGCACGTCCCTG------AGGATGCAGTTGGGAGAGAACGGACATTATTCAGTGCACCACTGGCGCAAAGCCTCTGAGCTGGAGGACATTGAGCTGGAGGAGAGCAGCACCTCAGAGAGCAGACGGAGGCGGAGCCGGGAGGAGCATCCTCGCAAAA---GCAGCAAGAGCCAGT-----------CCTTCTCCTACTCATATTCCTCCAAGCACTCCAGTAGCCGTCTTTCCCGCTCCAGCAATCGCTCCATGGAATTCTTCTCATATCGCCGTCGTCGGAAGCGTAGCAGTATCTGCCGTAAGAAGGTCACCCAGGCCCGGGAGAAACGCTTTACCTTTGTGCTGGCTGTGGTCATGGGGGTCTTTGTAGTTTGCTGGTTTCCTTTTTTCTTCAGCTACAGCCTCTATGGTATTTGCCGGGAGGCATGTGAGGTCCCTGAGACTCTCTTCAAGTTCTTCTTCTGGATTGGGTATTGCAATAGCTCCCTCAACCCAGTCATCTACACCATCTTCAACCAGGACTTCCGCAGGTCCTTTAAACACATTCTCTTTAAGAAGAAGAAGAAGAACTTTAGGCATTGA ......x.x.x:..x.....x:.x.....x...x.......:...x.............::.x................................x........x......x.x..x..x...........................xxx..x..............:..x...........:.....x..............x...:x............:..xx.:.........::.:.x...........x........x..:........x..x.....x..:.................x...x.x..:........x........x..x.....:.....x.....x.....x..x..x:.........:...:..x:....x........:..x..:...........:......:..:....xx.x.....xx.x..:..x..x.x:.:..x:..x......::x.....:..:.....x........:..x..:..:.....:.x...:.....:..:................xx:.......:::x..:........x...........:x.x..xx.x..x...xx:........::.------.:xx..x..x..xx.x....x....---..:.....x:..:..xxx..x..---------------:...x:....:..:...:.------::x:..x..::..:x....:.:-------------..:.x:.x.x..x:.:..xx.x.x..:..:.x:.:...x.x:..-..x.:..:..:x.---...x.x:x:......x..:xx....x..x..:xx.xx...:::---.x:..x:.:.x.:.:-----------.x:.xx..xx...xx:x...:.x::..---..:..:....:..x..x...x.....xxx......:.x..:......:::.xx.....x..:...:x...:.....::.x.....:x:x.....x:.......x..x.....:.....:..........................x..x..:..:x.:........:..:..:.................x..:..:..:.....x.....x..:x....x..:.:xx.x.......................:..x..:.....:.....x........:...........x:.............:.....xx.:........:.....:.....:x::x:..:..::.:.::...:.....x... 611M6D25M3D23M15D19M6D22M13I44M1I13M3I43M3D15M11D27M3I368M 901/1210 74.5% 1230/94230402 0.0% 64/1210 5.3% -5871669 -88358733 +3850 chr4 + 190214555 3834891 3834890 3835037 147 CTCCTGAGATGAGCACAGCAGAGAGGAGAGGGAGGGAGAGAGATGAGGAGAGGGAGGG-AGAGAGATGGGGAGAGGGCAGGGGTGAGGGAGAGAGAAAGACAAAAGAGAGAGGGAGAGGGAGGAGAGGGAGGAGAGAGAGGGAGGGGA chr4 - 94230402 79546153 79546152 79546288 14684115 14684114 14684250 136 CTCTTTGACTGTTCACAGCAGAGAGCACAGGG-----GAGGGACAGCGTAAGGAAGGATACAGAGATGGAGAGGGGGGGCTTGTTGGGGAGAG-------CAAGTGAGAAACGGAGGAAGAAGGGAGGAATCAGAAAAAGAGTAGAGA ...:.x::x..xx............x.x....-----...:..:::x.x:...:...:-.x........:...:...x:xxx..x:.......-------...:x....:.x....:::..:.:....:.xx...:.:..:.x:.:.. 32M5D21M1I34M7D48M 89/135 65.9% 136/94230402 0.0% 13/135 9.6% -75711262 -18519140 +3903 chr4 + 190214555 3871822 3871821 3871944 123 AGGGAGCGGGGTTCGC-------GGGGCTGGCGGGGACGTGGCGGGGCGGTGGAGGGGTGAGGGGGAGGGGAAGGACGGCGGCGGGGGCGGGGGAGGTGCACGGTGGGGCCGCGGGGACGGGGCGGGGGC chr4 - 94230402 92000779 92000778 92000905 2229498 2229497 2229624 127 AGGTAGTGCGGCTGGCTGCGGGAGGCGCCGTCGGCGCCGCGGCGGAG---GGGAGGGAGAAGAGGGGGCGGCTGAGGGACGGCGGGGGCCGGGGTAGGCCTCGGCGGGGCGGTGGGTGCCGCGCGGGGGC ...x..:.x..:.x..-------..x..:.x...x.x..:.....:.---x......:x:..:...:.x..xx.::x.:..........x....x:.xx.x...:.....x.:...x:.x.x........ 16M7I24M3D80M 82/120 68.3% 127/94230402 0.0% 10/120 8.3% -88128957 -6101445 +3068 chr4 + 190214555 3902028 3902027 3902096 69 CTGGGAGTCTAAAAGACTGAGAAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAGACAACAAA chr4 - 94230402 55605312 55605311 55605380 38625023 38625022 38625091 69 CTCAGAGATCATAAGACTGAAGAGAGAAGAGGAAAACAAAACAAAACAAAAAACACCAACAACAAAAAA ..x:...x::.x........::.:.:x.:.:x...................x.x.x...x:....x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -51703284 -42527118 +4106 chr4 + 190214555 3911011 3911010 3911167 157 CGCACATATGCATGCACACACATGCATGCATACACACATGCACCCACACACACATGCAAGCACACATAGAGATACACACACACACACAAACACACATACAGATACACATACATACAGGCACACACATGCACACACACAGGTACACACACATGCACAC chr4 - 94230402 89016087 89016086 89016222 5214181 5214180 5214316 136 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGT--------------AGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCAT----GGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACAC .:.....x..............:.:x...::...........xx::..:....:.--------------....:::::::..x....xx:.:....:..:...:.::::x...----.x:.....x.....---::.x.x.:::.x..:..x..... 55M14D44M4D14M3D23M 90/136 66.2% 136/94230402 0.0% 21/136 15.4% -85105076 -9125326 +3003 chr4 + 190214555 3911073 3911072 3911124 52 CACATAGAGATACACACACACACACAAACACACATACAGATACACATACATA chr4 - 94230402 81063211 81063210 81063262 13167141 13167140 13167192 52 CGCACAGAAATGCACATACAGACACAAGCACACATACAGCTTTACATGTGTA .:..:...:..:....:...x......:...........x.x:....:::.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -77152138 -17078264 +3927 chr4 + 190214555 3911150 3911149 3911265 116 GTACACACACATGCACACAAACACACGA--AGGCACACACATGCACATGCATACAGACACATGCACACACAGGCACACAAATACATACACACATGCACACACAGATACACATATGCAC chr4 - 94230402 89016084 89016083 89016199 5214204 5214203 5214319 116 GTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG--ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:......:x....::..x.......x--:x.............x.........x::.x...::::::...--....xx:::..:....:x....:::.x..x:x:....:x..... 28M2I42M2D44M 76/114 66.7% 116/94230402 0.0% 4/114 3.5% -85104934 -9125468 +3716 chr4 + 190214555 3911408 3911407 3911561 154 TGCAAACGTGCACACGCAGATACGCATGTACACACAAACACACATGCACACACATACACATGCACACACAAAAACACACGTGCACACACAT--GCACACACATACACATAAAGATATACACATAAAGACGCACACATGCACACACAGACACATGCA chr4 - 94230402 73121069 73121068 73121213 21109190 21109189 21109334 145 TGAAACTGTACACCCACAGAAAC---TGTAATCTCG--TGTGCATGCATATTCATACACAT--ATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAG----TACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..x..x:..:...x.:....x..---....xx.x.:--::::......:.:x.........--.:.....:..:..::x..:..:..::..--.:....:x:..:.::.:.:----....:.....x....x....x:x.......x::.:.x... 23M3D10M2D23M2D28M2I19M4D40M 95/143 66.4% 145/94230402 0.0% 13/143 9.1% -69209661 -25020741 +3943 chr4 + 190214555 3911413 3911412 3911507 95 ACGTGCACACGCAGATACGCATGTACACACAAACACACATGCACACACATACACATGCACACACAAAAACACACGTGCACACACATGCACACACA chr4 - 94230402 89016082 89016081 89016170 5214233 5214232 5214321 89 ATGTGCACAC----ATCTGCATGCACACACA--CGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACA .:........----..x:.....:.......--.::x:::..........:..x.....:....:x.:.:::::.....x....x...:...... 10M4D17M2D62M 65/89 73.0% 89/94230402 0.0% 6/89 6.7% -85104669 -9125733 +4245 chr4 + 190214555 3911706 3911705 3911844 139 GACGTGCACACACATACACATGCACAC------GCACACACATATGCGCATGCACACACGT----------GCACACACATGCACACACATATGCACAAGCACACACGTGCACACATGCACACGTGCACACGTGCACACACATGCACACTTACAC chr4 - 94230402 89016081 89016080 89016228 5214175 5214174 5214322 148 GATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACAC--ACGGATGCGTGCCCATGGGCACACCTGCACTGCTGC-----TGTGCCCATATCCACACCCCCAC ..:.........:x.:..::::.....------..:......:....:x.....:......----------...x....x...:.....--.:.x.::x.::.x..:.x......x.....xxx...-----..::.x..:..x.....::x... 27M6I28M10I18M2D36M5D23M 94/132 71.2% 148/94230402 0.0% 23/132 17.4% -85104375 -9126027 +4000 chr4 + 190214555 3911719 3911718 3911828 110 ATACACATGCACACGCACACACATATGCGCAT--GCACACACGTGCACACACATGCACACACATATGCACAAGCACACACGTGCACACATGCACACGTGCACACGTGCACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC ..:::..::..:x:...::....:.::..:x.--........:....x.::...:...::.x..:..::::x:x....x:.:.......:.x.::.....x..:.x...... 32M2I78M 69/110 62.7% 112/94230402 0.0% 2/110 1.8% -85104363 -9126039 +3869 chr4 + 190214555 3917115 3917114 3917235 121 AGAAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAAGGAGAGAGGGACGGAGGGAGGGAAATAAAGAGAGAGA--AGGAGAAAAAGAAAAAAGAAAGAAAGAGAAAGAGGGAGAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:.x.:...............::.:.:......:...xx.x...::..x:.:..x:x:..:x.::..xxx...x...:::.--....:.......:....x.xx.:..::..:..:::x.:.. 81M2I40M 76/121 62.8% 123/94230402 0.0% 2/121 1.7% -26616049 -67614353 +3584 chr4 + 190214555 3919100 3919099 3919191 92 AAAATATACATATATATATGTGT-ATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATATATACACACATA chr4 - 94230402 14964791 14964790 14964883 79265520 79265519 79265612 93 AAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...:.::.:x......x.x....-:.:x.:.:.x..:...x..::.:.::.:::..:...:........xx.........::.:.......:. 23M1I69M 61/92 66.3% 93/94230402 0.0% 1/92 1.1% -11045691 -83184711 +3363 chr4 + 190214555 3919108 3919107 3919191 84 CATATATATATGTGTATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATATATACACACATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.:.......::...x.:..:.:.x.:::...:...::x.::..xx...:.:.............x.:.:.x.::x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -4476679 -89753723 +3780 chr4 + 190214555 3919113 3919112 3919195 83 ATATATGTGTATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATATATACACACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:...:.:.:.::...x.::...:.x..:....:.:..:x..:..xx...............:.:.x.....x..:x... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -4476675 -89753727 +3583 chr4 + 190214555 3919117 3919116 3919186 70 ATGTGTATATATATATATGTGTGTGTATATATATGTGTATATATATATACACACACACACATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .....:........x....x:xx...x......::.:..:...:.x.:.x...x..........x..... 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% -20217076 -74013326 +3184 chr4 + 190214555 3919170 3919169 3919231 62 CACACACATATATACACACATATATATACACACATATATATACATATATATACACACACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x..::.....x.::......:....:...:....:.x.:.....:x:..:...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -3677242 -90553160 +3115 chr4 + 190214555 3919243 3919242 3919325 83 TAAATATATATATATATACCAGTGTGTGTGTATATATATATATATATCACAGTGTGTGTGTGATATATATATATATACACACA chr4 - 94230402 1888770 1888769 1888852 92341551 92341550 92341633 83 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .:......:....:..:.x:....:x.x...:..:.......:....x:xxx.....:.:.:x.x.::...x....x..x.:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 2030473 NA +3115 chr4 + 190214555 3919243 3919242 3919325 83 TAAATATATATATATATACCAGTGTGTGTGTATATATATATATATATCACAGTGTGTGTGTGATATATATATATATACACACA chr4 - 94230402 1885629 1885628 1885711 92344692 92344691 92344774 83 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .:......:....:..:.x:....:x.x...:..:.......:....x:xxx.....:.:.:x.x.::...x....x..x.:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 2033614 NA +3446 chr4 + 190214555 3919282 3919281 3919341 60 ATATATATCACAGTGTGTGTGTGATATATATATATATACACACACACACACACACACACA chr4 - 94230402 21908450 21908449 21908509 72321894 72321893 72321953 60 ATATATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACA ........:.x.:...:x:.xx.........:....:...............:xx..... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -17989168 -76241234 +3027 chr4 + 190214555 3919284 3919283 3919343 60 ATATATCACAGTGTGTGTGTGATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 21908450 21908449 21908509 72321894 72321893 72321953 60 ATATATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACA ......xx:.:x:...:x:.x.x........:....................:xx..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -17989166 -76241236 +3051 chr4 + 190214555 3958303 3958302 3958363 61 CTCCCGGACTCAAGCGATTCTTCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCACGC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:..::.....:.x...x:xx.x........:..:.........:......x.::.:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -14238836 -79991566 +3361 chr4 + 190214555 3968028 3968027 3968096 69 TTTTTATATATATACACACACATATATATACACACACATATACACATGTACATGTATATA--TATATGCAT chr4 - 94230402 66904842 66904841 66904912 27325491 27325490 27325561 71 TTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ....:......:...::.....:.:...:............x:.x:.x:.x:......:.--:...:.... 60M2I9M 51/69 73.9% 71/94230402 0.0% 2/69 2.9% -62936814 -31293588 +3501 chr4 + 190214555 3968047 3968046 3968158 112 ACATATATATACACACACATATACACATGTACATGTATATATATATGCATATATATACATACATATATACATATACATGTATATATGTGTATATATACACATACATATATAC chr4 - 94230402 4417349 4417348 4417457 89812946 89812945 89813054 109 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATAAAC .........:.........:.x:x....:::....x:x:.x.::.::::...xx.x:...x:.x.......:...:x.:.x......:---:.:.x....xx.......x.. 88M3D21M 71/109 65.1% 109/94230402 0.0% 3/109 2.8% -449302 -93781100 +3107 chr4 + 190214555 3968110 3968109 3968170 61 TATATACATATACATGTATATATGTGTATATATACACATACATATATACATATATATGTAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:.:...x........x:.:.x......::.::::.:.............x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -28991458 -65238944 +3672 chr4 + 190214555 3975902 3975901 3976002 101 TGGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTAGAGGTGCCTGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG .....:...x.:------..:..:..:xx:x..:.::........:.x...x..x.x........::.............:..x.x....--:....::.. 12M6D72M2D9M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% -14221212 -80009190 +3033 chr4 + 190214555 4068728 4068727 4068790 63 ATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::.:..:.x.........:.....:..:......x::.....:x..:::.::.... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -3527685 -90702717 +3033 chr4 + 190214555 4068792 4068791 4068854 63 ATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::.:..:.x.........:.....:..:......x::.....:x..:::.::.... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -3527621 -90702781 +3033 chr4 + 190214555 4068824 4068823 4068886 63 ATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::.:..:.x.........:.....:..:......x::.....:x..:::.::.... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -3527589 -90702813 +3039 chr4 + 190214555 4068856 4068855 4068923 68 ATATATACACGTATATATGTATATATACACGTATATATACACGTATATATGTATATATACACGTGTAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x.::.:..:.x.........:.....:..:......x::.....:x..:::.::....:x:.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -3527557 -90702845 +3063 chr4 + 190214555 4073935 4073934 4073993 59 AGAGAGAGAGTGTAAAAGAGAGAGAGAGAGAGACCGTAAGAGAAGGGAGACAAAGAGAT chr4 - 94230402 67325820 67325819 67325878 26904525 26904524 26904583 59 AGAAAGGGAATGCATAAGAGAGAGAGAGAAGGAACAGACACAAAGAGAGTCAAAGAGAT ...:..:..:..:.x..............::..x.:x.x:x:...:...x......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -63251885 -30978517 +3654 chr4 + 190214555 4076541 4076540 4076619 79 CTGCAACCTCTGTCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.:...........x...x..x.x........::::.......:.:.:....--.:........ 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -14120585 -80109817 +6359 chr4 + 190214555 4076653 4076652 4076821 169 TTCTTGTTTGTTTTTCACAAATAGGACTTCTTATTTGCTACCGTTTTAAGTCTGAACTTTAAACAGATTCTTGGACTGGTGGTTCACATCCATCAGCTCATTCAACTTCAGCATGTGTCTCGTCCCTAGTGGGTTTTCCAGAACTACTACCTTCACCACGAAGCTCCAT chr4 - 94230402 59858267 59858266 59858421 34371982 34371981 34372136 155 TTCTCGTGTGT--------AATAAAACTTTTATTTTTGGTCAATATTTAGT------TTCAGACAGACTCTTGCACAGGCGGCTCGTATCCATCAGCTCGCTCTACTTTCGCACCTGCCTCATCCCCAGAAGGTTTTCCAGCACCGCCACCTTCACCGTGCAGTTCCAT ....:..x...--------....::....:.xx...xxxx.x:.x..x...------..:.:.....:.....x..x..:..:..::............::..x....:x...:x..:...:....:..x:..........x..::.:.........::.x..:..... 11M8D32M6D112M 111/155 71.6% 155/94230402 0.0% 14/155 9.0% -55781614 -38448788 +5261 chr4 + 190214555 4076826 4076825 4076930 105 TTCAAATCCAGAGTTCTCCAGCATTTTTACTTTTCTAATGAAGACAACATGGAGAGGATAAAT----TGGCAAGCCTTTTCTATATCTTTTCCAATGTTGTCTGGAATC chr4 - 94230402 59858993 59858992 59859101 34371302 34371301 34371410 109 TTCAAACTTGGGCTTTTTCAGCATCTTAACCTTGCGGACATAGACATCGTGAAGGGGGTAAATGGACTGACAAGCCTTCTCTATGTCTTTGCCAATGCTGTCTGGGATC ......::::.:x..:.:......:..x..:..x.x:.::x.....x.:..:..:..:.....----..:........:.....:.....x......:.......:... 63M4I42M 77/105 73.3% 109/94230402 0.0% 4/105 3.8% -55782167 -38448235 +18715 chr4 + 190214555 4076930 4076929 4077326 397 CAATTTATTGACCACTTCTTTCAAGTCATTTGTCTGCACCTCTCAGGTCATGATTTCCATCATCTTCTTCTGGATTTGGCGGAC-TGTTGGTGCTGATCATAAGAGGTCTTCAGTATCTGATTGTTGTGTTTTTTAGTAAAACCAACACAAAACAGATGAAAGAAGTAACCATCGGTAGTCTTGACATCAACATGAGCTTCAATCATTGTT----------------------------------------------------------------------------------------------------------------------------GAA-----------------------------------CATTTTTCAACCATGGAACATATTTTGTCACAGGTAAGACCCATGCCATAGAAGTTAGTCAGGCAGTTTTTGTCCTGAACATCTTCAGTAATCAGCTTGAATTTTCTAAATGCAACTTCATCATTCTGCAAATCAGCAAGACTCACTTCAAACACAAGACGCTTGAGACCATCAGATGCAATTT chr4 - 94230402 59859658 59859657 59860214 34370189 34370188 34370745 557 CAGCTTATTGACAACTTCTTTCAGGTCATTGGTCTGGACCTCTCGGGTCATGATTTCCATCATCTTCTTGCGAATCTGCCGAACCTGCTGATGCTGGGCATACGAGGTCTTGCGGATTTGGTTATTACGCTTCTTTGTGAAACCCACACAGAAGAGGCGCAGTAGGTAACCATCCGTAGTTTTGACATCCACGTGGGCTTCAATCATCGTCTGGAAAAGAAACAGTTATGCCCATGACAGGCCTCCCAGACGTGCACCTGACATTCATTAATATCCGCCAATACCATCAGAAACAGCTTTAGGGCACACCAGTAGCCACTTCCTTTCCTAAAGAGGAAAGCAGTAACGCAGACCTTGTTCTTTACACACCTGCCACTTCTTCACCATGGAACACATTTTGTCGCGGGTGAGGTCCATTCCATGGAAGTTGGTCAGACAATTTTTCCCCTGAACGTCCTCAGTTATCAGCTTAAATTTACGGAAGGCAACCTCATCGTTCTGCAGATCAGCCAGACTCACTTCAAATACACGACCCTTCAAGCCATCAGAGGCAATTT ..::........x..........:......x.....x.......:........................x:.:..:..x..:..-..:..:.....:x....x........xx.x..:..:..:..::.:..:..x..:.....x.....:..x..::.x.:x.:.........x.....:........x..:..:...........:..:----------------------------------------------------------------------------------------------------------------------------...-----------------------------------..:..:.:x...........:........:.:...:..::....x....:......:.....:..:.....x:.......:..:.....x........:.....x.x:..x.....:.....:.......:......x..............:...x...x...x.::........x....... 84M1I126M124I3M35I184M 315/397 79.3% 557/94230402 0.0% 160/397 40.3% -55782728 -38447674 +4494 chr4 + 190214555 4077430 4077429 4077496 67 ACTTTCTTCTTAACTCCTTTTTTGCCACCTTTCATAAGGCACTTGTTCTTAACAACCGCCATGGTGC chr4 - 94230402 59861545 59861544 59861611 34368792 34368791 34368858 67 ACTTTCTTCTTGGCGCCTTTCTTGCCGCCCTTGGTGAGGCGCTTGTTCTTGCCGACCGCCATGGTGC ...........::.x.....:.....:..:..x:.:....:.........:x.:............. 67M 54/67 80.6% 67/94230402 0.0% 0/67 0.0% -55784115 -38446287 +3086 chr4 + 190214555 4113850 4113849 4113901 52 AAAACATTTAATGCTGCTTTTAAAACAACAACAACAACAACAAAAAAAAGGC chr4 - 94230402 28982592 28982591 28982643 65247760 65247759 65247811 52 AAGCCATTTAAGATGACTTTAAAAAAAACAACAACAACAACAAAAAAAATGC ..:x.......x::x:....x....x.......................x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -24868742 -69361660 +3374 chr4 + 190214555 4122475 4122474 4122526 52 CTGTTTTTTTTTTTTTTTTGGTTTGTTTTTTGTTTGTTTGTTCGTTTGACTT chr4 - 94230402 23073756 23073755 23073807 71156596 71156595 71156647 52 CTGTTCTTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTTTAACCT .....:......:.x.....x.....x...............:x...:..:. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -18951281 -75279121 +3130 chr4 + 190214555 4154320 4154319 4154367 48 CTCAAAACAAACAAACAAAAAAAAAAAACAAAACAAAAAACCAGCATG chr4 - 94230402 12600800 12600799 12600847 81629556 81629555 81629603 48 CCCCAAACAAATAAACAAAGGAAAAAAAAAAAACCAAAAACCACCATG .:.x.......:.......::.......x.....x........x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -8446480 -85783922 +3053 chr4 + 190214555 4155588 4155587 4155663 76 AATAAGGAAAAGAAAGAAATGGAAAATGCGAAATGGTAAGAAAAAATGGCATAATAAACATTTGTGTGGTGTTGAT chr4 - 94230402 84937111 84937110 84937186 9293217 9293216 9293292 76 AACAAGGAAAAAAAAAACACTGAAAAGAAGGATTTGTACTGAAAAATAGCACCAGAAACATTTGTATAATCATGAT ..:........:...:.x.:x.....x:x.:.x.x...xx:......:...:x.x..........:.::.xx.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -80781523 -13448879 +3010 chr4 + 190214555 4178986 4178985 4179033 48 CTGGTTTTTCGGGGGTTTTTTTGTTTGTTTGTTTGTTTGATTTTGTTT chr4 - 94230402 71837902 71837901 71837949 22392454 22392453 22392501 48 CCAATTTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTT .:::.....:..x.........x...............x:....x... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -67658916 -26571486 +3139 chr4 + 190214555 4199221 4199220 4199260 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -14783094 -79447308 +3162 chr4 + 190214555 4199221 4199220 4199258 38 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x...................::.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -14783096 -79447306 +3185 chr4 + 190214555 4199221 4199220 4199256 36 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982319 18982318 18982354 75248049 75248048 75248084 36 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................................::.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -14783098 -79447304 +3253 chr4 + 190214555 4201388 4201387 4201518 131 CTGTACTCCAGCTTAGGCAACAGAGTGAGACTCTGTCTCAAAAAAAATAAATAAAATAGAATAAATAAATAAATATATATATATACACACACACACACACACACACACACACATACACACACACATATATA chr4 - 94230402 87372680 87372679 87372792 6857611 6857610 6857723 113 CTGTGCCACGAGTTAGGAAACATGCTGAG------------------TAATTTTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ....:.:x.::x.....x....x:x....------------------...x.xxx.:...x..:....:x:..x.x.xx...x.x..x...........x.........:x:....::.:::..:...... 29M18D84M 76/113 67.3% 113/94230402 0.0% 18/113 15.9% -83171292 -11059110 +3269 chr4 + 190214555 4201448 4201447 4201523 76 ATAAATAAATAAATATATATATATACACACACACACACACACACACACACACATACACACACACATATATAGCCTA chr4 - 94230402 8395804 8395803 8395879 85834524 85834523 85834599 76 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA .....:.x:..xx..:....:...:.x:...:xx.:.................x.....x.::x...x.x.:..:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -4194356 -90036046 +3045 chr4 + 190214555 4201452 4201451 4201518 67 ATAAATAAATATATATATATACACACACACACACACACACACACACACATACACACACACATATATA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .....:.x:...x..:....::.::.x:...:xx.:.............:...x.....x..:x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -4194352 -90036050 +3231 chr4 + 190214555 4219806 4219805 4219875 70 TACGTGTATATATGTATACATATGTGTATACATATATATACAC--ATATACATGTATATATGTATACATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ...:..x.....x.::.....:.:..........:::.:.:..--.....x.:x.....:...:.x:..... 43M2I27M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% -48261430 -45968972 +4196 chr4 + 190214555 4219818 4219817 4219933 116 TGTATACATATGTGTATACATATATATACACATATACATGTATATATGTATACATATATGTATATATACACATATATGT--ATACACATATATGTGTGTATATACGTATACATGTATA chr4 - 94230402 73121092 73121091 73121209 21109194 21109193 21109311 118 TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ....xx.x::....:..:.....x:.............::x.x::...x:......::.:..x:..:..:x:.......--:....:...x..::.:x:.:.x.x::.:......... 79M2I37M 76/116 65.5% 118/94230402 0.0% 2/116 1.7% -68901274 -25329128 +3799 chr4 + 190214555 4219852 4219851 4219919 68 TACATGTATATATGTATACATATATGTATATATACACATATAT--GTATACACATATATGTGTGTATATA chr4 - 94230402 52481236 52481235 52481305 41749098 41749097 41749167 70 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATA ......x.....x.::.....:........:....:..:...:--:....x..x...........x.... 43M2I25M 55/68 80.9% 70/94230402 0.0% 2/68 2.9% -48261384 -45969018 +3459 chr4 + 190214555 4219892 4219891 4220006 115 TATGTATACACATATATGTGTGTATATACGTATACATGTATACATATATACACATATATACGTATACATGTATACATATATACACATATATACGTATATAGGTGTATATACATAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:..:..:..:..x:..:::::....:..:x.x:....x:......::..:.x:..:.::x.....::..x:........x.:..::x:.:.x:x.:.:.x:......x:..x.. 115M 67/115 58.3% 115/94230402 0.0% 0/115 0.0% -68901210 -25329192 +3003 chr4 + 190214555 4219894 4219893 4219954 61 TGTATACACATATATGTGTGTATATACGTATACATGTATACATATATACACATATATACGT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ...:...x:...:...x....x.:.:::::.:.:.:..............x......x.:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -28739674 -65490728 +3231 chr4 + 190214555 4219986 4219985 4220073 88 TATATAGGTGTATATACATATATATGTATATACATGTATATACGTATATATGTATACATATATACATATACGTGTATATACATATATA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ......xx::.xx.......x......::..:x..:...x..x.......:....xx.x.x.xx:x.::..:..:.x........... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% -8582800 -85647602 +3489 chr4 + 190214555 4219997 4219996 4220079 83 ATATACATATATATGTATATACATGTATATACGTATATATGTATACATATATACATATACGTGTATATACATATATATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:::...:.:..:...x........x...:...:....:x.....xx.....:.:..::::.:.:.x.:.:.x...x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -4175791 -90054611 +3207 chr4 + 190214555 4220035 4220034 4220103 69 ATGTATACATATATACATATACGTGTATATACATATATATGTATACATATATATATATATATATATATA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ....:.::..:.:.:....x..:.....x.......:....:x.....xx...:.:.:.:.:.:.:.:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -4175753 -90054649 +3328 chr4 + 190214555 4220065 4220064 4220124 60 ACATATATATGTATACATATATATATATATATATATATATATTTTTTTTTTTTTTGAGAT chr4 - 94230402 71856861 71856860 71856920 22373483 22373482 22373542 60 ACATGTATACATTTGCATGTTTATATATGTATGAAAATACATTTTTCTTTTTTTTGTGAT ....:....::.x.:...:.x.......:...:x.x...:......:.........x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -67636796 -26593606 +3244 chr4 + 190214555 4229471 4229470 4229506 36 TTTTTGTTTGTTTGTTTGGTTGGTTGGTTGGTTTTT chr4 - 94230402 36775839 36775838 36775874 57454529 57454528 57454564 36 TTTTTGTTTGTTTGTTTGGTTGGTTGGTTGATTTTT ..............................:..... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -32546368 -61684034 +3128 chr4 + 190214555 4259100 4259099 4259165 66 AGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAGTAGCTGCCATCAT chr4 - 94230402 30090784 30090783 30090848 64139555 64139554 64139619 65 AATGTGACACTTTCATTAAAAAAAAGAAAGAAAAAAAAAAGGAAAATACATAGAAGCTG-CATCAT .:..x...x..x..x:x........:...:..........::....x.:.:..x.....-...... 59M1D6M 50/65 76.9% 65/94230402 0.0% 1/65 1.5% -25831684 -68398718 +3912 chr4 + 190214555 4298487 4298486 4298584 98 TGCCATCATGACTCACTACAGCCTCAACCTTCTGGCCTCAAGCAGTCCTCCTCCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCATGTGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT---CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..x.......x:---........:x..x.......x:.....::x.:.x.xxxx........:............:......--.:..::....::.. 12M3D67M2D14M 69/93 74.2% 93/94230402 0.0% 5/93 5.4% -13898627 -80331775 +3103 chr4 + 190214555 4358333 4358332 4358410 78 TGTGCCTGAGTTTCTTCTTAGTAAAATGGGGATGATAACGGTTCCTTCTCCCAGGGTGTCAGAGGATTAAATGAACTA chr4 - 94230402 58243169 58243168 58243246 35987157 35987156 35987234 78 TGTGTTTCAGTTGCCTCTCTATGAGATGGAGATGATAACGCTTCCCTGCCTCGGGGAGTAATGAGATCAACTAAGATA ....::.x....x.:...:x:.:.:....:..........x....:.x:.:.:...x..x.x::...:..x.:.:x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -53884836 -40345566 +3611 chr4 + 190214555 4365766 4365765 4365860 95 TTCATCTTCCCAACATCCCCAAGTGA-----AACTAGTATTAGGTCCATTTTATAGGTGAGGAAACTGAGGCACAG--AGTTTCAATAACTTCCACAAGGTC chr4 - 94230402 10729161 10729160 10729262 83501141 83501140 83501242 102 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.x.:..x...:.:...::x.x.:-----..:..x...:..x.........:.....:.:.............x--..x..x.:...:..x.x..::... 26M5I45M2I24M 68/95 71.6% 102/94230402 0.0% 7/95 7.4% -6363395 -87867007 +3173 chr4 + 190214555 4375520 4375519 4375608 89 TCCTTTCTTTCTTTCCTCCCTCCCTTCCTCCCTTTCCTTCCTTCTTTTTTTTTTTTTTCTGA--------GACAAGTTCTCATTTTGTGGCCCAGTC chr4 - 94230402 24861609 24861608 24861705 69368698 69368697 69368794 97 TCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTTACAAGCCTTTAATCTATAACCCTGCC ..x..........:.....x:.x:.::.:.........::...:.:.:.....:..:x:.x.--------x.....:::.:.x.:.:.::...x.:. 62M8I27M 58/89 65.2% 97/94230402 0.0% 8/89 9.0% -20486089 -73744313 +4190 chr4 + 190214555 4383388 4383387 4383508 121 CTTAAAAAAATAAGAATAGCTCATTTGATTCTCACAACACTGCTCTGATGGAGGTT----TCATTATCTCCATTT-ATAGATGGGGAAACTGAAGCATAGAAAGGTTAAGCAGCTTGCCTGAAGTC chr4 - 94230402 10729141 10729140 10729262 83501141 83501140 83501262 122 CCTGAATAAACAGGAATTG---ATTT-AGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:.:..x...:.:....x.---....-.x:.......:..:x..x...x.x....x----::..:.x........-.:..:....:.......:...:.x.x........:.::.....:::.... 19M3D4M1D29M4I15M1I50M 85/117 72.6% 122/94230402 0.0% 9/117 7.7% -6345753 -87884649 +3742 chr4 + 190214555 4527794 4527793 4527888 95 ATATATATATGTTTTTATATATATATAATTTTATATATATATGTCTTTATATATATATACACACACACACACACATATATATATATATTAAAAAC chr4 - 94230402 8395788 8395787 8395876 85834527 85834526 85834615 89 ATGTGTGTATGTGTGCATAAACATGTA--TTTACATATGTATGCCT----ACATTAATACACACACACACACACAGACACAAATGAATAAAAAAC ..:.:.:.....x.x:...x.:..:..--....:....:....:..----.:..xx...................x.:.:.x..:x..x...... 27M2D17M4D45M 67/89 75.3% 89/94230402 0.0% 6/89 6.7% -3867994 -90362408 +3077 chr4 + 190214555 4527801 4527800 4527876 76 TATGTTTTTATATATATATAATTTTATATATATATGTCTTTATATATATATACACACACACACACACATATATATA chr4 - 94230402 21704640 21704639 21704709 72525694 72525693 72525763 70 TGTGTCATTATA---GTAAAATTTCAC---TAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA .:...:x.....---:..x.....:.:---..x.x:x.:..........:..................::.:.... 12M3D12M3D46M 54/70 77.1% 70/94230402 0.0% 6/70 8.6% -17176839 -77053563 +3077 chr4 + 190214555 4527801 4527800 4527876 76 TATGTTTTTATATATATATAATTTTATATATATATGTCTTTATATATATATACACACACACACACACATATATATA chr4 - 94230402 21701067 21701066 21701136 72529267 72529266 72529336 70 TGTGTCATTATA---GTAAAATTTCAC---TAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA .:...:x.....---:..x.....:.:---..x.x:x.:..........:..................::.:.... 12M3D12M3D46M 54/70 77.1% 70/94230402 0.0% 6/70 8.6% -17173266 -77057136 +3050 chr4 + 190214555 4578956 4578955 4578994 39 CAAAAACAAAAAACAAACAAACAACAACAACAACAAAAA chr4 - 94230402 18021889 18021888 18021927 76208476 76208475 76208514 39 CAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAA ..:...x.::............................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -13442933 -80787469 +3029 chr4 + 190214555 4578958 4578957 4579031 74 AAAACAAAAAACAAACAAACAACAACAACAACAAAAACCCAGT------TGCCCAGATTTGGGTCAGCCAGGAGAGCACA chr4 - 94230402 89474250 89474249 89474327 4756076 4756075 4756153 78 AGAGAAAACAACAAACAAACAACAACAACAACAAAAAAACAGTTATGTATGCCTAAAATGGCATAAA--AAGAGAGTACA .:.:x...x............................xx....------....:.:.x.x.x:.x.:--.:.....:... 43M6I18M2D11M 56/72 77.8% 78/94230402 0.0% 8/72 11.1% -84895292 -9335110 +3144 chr4 + 190214555 4578964 4578963 4578998 35 AAAAACAAACAAACAACAACAACAACAAAAACCCA chr4 - 94230402 79949139 79949138 79949173 14281230 14281229 14281264 35 AAAAACAAACAAACAACAACAACAACAAAAACCTA .................................:. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -75370175 -18860227 +3053 chr4 + 190214555 4578965 4578964 4578998 34 AAAACAAACAAACAACAACAACAACAAAAACCCA chr4 - 94230402 86688689 86688688 86688722 7541681 7541680 7541714 34 AAAACAAACAAATAACAACAACAACAAAAACCCA ............:..................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -82109724 -12120678 +3022 chr4 + 190214555 4588315 4588314 4588361 47 AACTTAAAGTAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 26643715 26643714 26643761 67586642 67586641 67586688 47 AACACAAAGTACAGTTAAAAAGAAAAAAAGAAGAAGAAAAAAGAAAA ...x:......x.:.......:.......:..:..:......:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -22055400 -72175002 +19866 chr4 + 190214555 4593868 4593867 4594292 425 GTTAGGTTGATGGGATTAATCAGCTCATGTTAACAAGCTGATGATCATGAAATAAAGATGACCATTTCAATAGGATACTCGGGGCTGAGGGACTGAAGTGAAATCATTTGGACTTCTACAGAGGTCATGGTTGAATTATCACAAAACTTCCTTTACTCAAAGCAGATGCTTATTAAGATTAATTTAGTGTGAAAAGTGAACCAGACTGAGTACAAAGGACATTGTCTCCTCAATTATGTAATAAGACACCTCCTCATTGTCCTGTACTCACTGAAGATGATTGTGCATTTCCTCAGGGACATTTCAGCGCGGTGAGCTGAGCCACTGCGCAATCCCTCTTTTGGGGATGTTCAATGAAATCTCAGTGTTCACACAA--AGACAAAGTGGGCAGAGACAAAAGG--------GAACATCAACTGGGAAGGGGAAAA chr4 - 94230402 12603936 12603935 12604356 81626047 81626046 81626467 421 GTTAGACTGATGGGATTAATCAGCTCATGTTAACACACTGATTATCATACAGTAAAGGGAAATGTTTCAAAAGAATACTCCAGTCTGAAATG-TAAAGTGAAATCATTTGGACTTCCAGAGAGGTCATGGTTGAAATATCACAAAACTCTCTTTACTCAAAGCAGATGCTTATTAAGATTAATTTAGTGTGAAAAGTGAACCAGAAAGCATATAAAAGACAATGCCTCCTCAATTATGTAATAGGACACCTCCTCATTATGTAGTGTGCACTGAAGATGATGGTGT-TGTCCTAAGGGATGTATAACTACAGTTTGCCAA----------AGTCCCTCTCAC--CCATTTTAGATTAAATATCTGGCTGCAGAGAATGAGGCCAAGTGAACAGAAACAAGAGAACTCAAATAAACACCAATTTAAATGAAAAAGA .....::............................x:.....x.....:x.:.....:x:.x::......x..:......x:.x....::x:-.:.....................:.x................x............::.......................................................xx.x:..:...:....x..:..................:..............:.x:x..::x.............x...:-.x....x.....::.x.x.x::.:..xx..::.----------.:.......:x:--xx..x..x:..x....x..x.xx.x..x.x..--..:.x.....::....:....:..:--------:....:...:.x::.x.:::..:. 92M1D193M1D33M10D12M2D32M2I25M8I24M 315/411 76.6% 421/94230402 0.0% 24/411 5.8% -8010068 -86220334 +3118 chr4 + 190214555 4616782 4616781 4616827 46 AAAAACAACAACAACAACAAAAAACCCAAAAATTAGTCAGGCATGG chr4 - 94230402 75231127 75231126 75231172 18999231 18999230 18999276 46 AAAAAGAACAACAACAACAAAAAACCCTAAAAAAAAGCAGGCATGG .....x.....................x....xx.:x......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -70614345 -23616057 +3332 chr4 + 190214555 4619697 4619696 4619778 82 CTGCAACCTCCGTCTCCAGGGTTCAAGTGATTCTTATGCCTCAGCCTCCCTACTAGCTGGGACTACAGGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..:xx:x..:.x...........x...x:.x.x........::.x.x.......:......x...-----...... 71M5D6M 57/77 74.0% 77/94230402 0.0% 5/77 6.5% -13577429 -80652973 +3128 chr4 + 190214555 4635841 4635840 4635898 58 GAGTTGCTGGTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 48640830 48640829 48640887 45589516 45589515 45589573 58 GATTTGGTGGTTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTTCCTGTGGTAAGTAG ..x...x........x.......x......x.............::.x..:x.x.x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -44004989 -50225413 +3877 chr4 + 190214555 4648167 4648166 4648249 83 CTGTAGCCTCCACCTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCCCCAACATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..::....:xx.x..:.:.........:.x...x..x.x........::...........:......--.:...x...x::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -13548959 -80681443 +3188 chr4 + 190214555 4679870 4679869 4679955 86 TGGCTAATTTTTTTTTTTTTTTTTTTGTATTTTTGGTAGAGACGGG---TTTTTTCATTTTTTTTTTTTTTTTTTTGTATTTTTAGTTT chr4 - 94230402 64473710 64473709 64473795 29756608 29756607 29756693 86 TGGCTGTTTTTTTCTTTTTTTTTTTTTAGTTTTTGAAAGAATGTGGCTATTATTACAGTTCTCTTTTTTTTTTCTT---TTTTCAATCT .....:x......:............xx:......:x...:xxx..---..x..x..x..:.:..........:..---....:.:.:. 46M3I27M3D10M 62/83 74.7% 86/94230402 0.0% 6/83 7.2% -59793840 -34436562 +3751 chr4 + 190214555 4700970 4700969 4701050 81 GTCATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACAT chr4 - 94230402 8395785 8395784 8395865 85834538 85834537 85834618 81 GCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:...:.:...:......::.:x:::...:.x.::....:...::x:...:xx.:.................x.....x.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% -3694815 -90535587 +3509 chr4 + 190214555 4700973 4700972 4701038 66 ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x:.:...x..:.....:::::....:.:......:.xx........::............. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -10263846 -83966556 +3103 chr4 + 190214555 4700974 4700973 4701041 68 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:....::.:x:::...:.x.:::.:.....::x..:..xx.:.................x..... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -3694821 -90535581 +3266 chr4 + 190214555 4700974 4700973 4701054 81 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATATGA chr4 - 94230402 8395791 8395790 8395871 85834532 85834531 85834612 81 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA .:.:.:......::.:x:::...:.x.:::...:...::x....:xx.:.................x.....x.::x..:. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -3694817 -90535585 +4148 chr4 + 190214555 4700975 4700974 4701054 80 ATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATATGA chr4 - 94230402 8395788 8395787 8395867 85834536 85834535 85834615 80 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA ..:.....:......::.:x:::...:.x..:....:...:.x:...:xx.:.................x.....x.... 80M 58/80 72.5% 80/94230402 0.0% 0/80 0.0% -3694813 -90535589 +3563 chr4 + 190214555 4700984 4700983 4701042 59 TGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...x..:.....:::::..:...:........xx........::............. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -10263842 -83966560 +3310 chr4 + 190214555 4700986 4700985 4701044 59 TGTGTGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...x..:.....::::::.:...:....:...xx........::............. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -10263840 -83966562 +3332 chr4 + 190214555 4700990 4700989 4701055 66 TGTGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACACACACATATGAC chr4 - 94230402 14964826 14964825 14964891 79265512 79265511 79265577 66 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGAC .:...x..:.....:.:.::.:...::.:.:...xx........::.............xxx.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -10263836 -83966566 +3014 chr4 + 190214555 4700992 4700991 4701043 52 TGTGTGTGTGTGTATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .......:......x.:.x...........:x..:.:::.::........:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -44713760 -49516642 +3145 chr4 + 190214555 4725601 4725600 4725650 50 GTGTGTGTGTGTGTGTGCGTGTGTGCATGCAGAGAGAGAGAGAGAGAGAT chr4 - 94230402 33398821 33398820 33398870 60831533 60831532 60831582 50 GTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGAT .....:........:.:.:::.:.::.::..............x...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -28673220 -65557182 +3420 chr4 + 190214555 4744399 4744398 4744487 89 AGACTGAGTCCTGCCTCTACCACTTATGGGCTGTGTGGCTTTGGGAAAGTAACTTTACCTCTCTGTGCCTCAATTTCTTCCTCTGCAGA chr4 - 94230402 60684661 60684660 60684749 33545654 33545653 33545742 89 AGACCTGTTCTTGGCCCCACTGCAGACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAA ....:x:x..:..x.:.:..::.xx.:xxx.....::.::.x:..x....:.:x.:.............:.x.....:.......:.:. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -55940262 -38290140 +3036 chr4 + 190214555 4754072 4754071 4754128 57 CTGTTCCACAGATAAGAAAACTGAGATCCAGAGAGGTTAAGTGGTTTTCCCAAAGTC chr4 - 94230402 10729206 10729205 10729262 83501141 83501140 83501197 57 CCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .::..::....:.::..........::x..x.x.........::...x....:.... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -5975134 -88255268 +3016 chr4 + 190214555 4761173 4761172 4761278 106 AAAAAAAAAAAAAAAAAAAGAGAGAGAAAGAGGGAGAGAGAAAAAAAAGGCTTAAAAACTCCTGACAATGAGCAATTCTTCATGGAACAAAACTATTACAATAGCC chr4 - 94230402 71886283 71886282 71886388 22344015 22344014 22344120 106 AGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAATGAAGGACTCATAAGCTTTTTTCTTGTTCCAGTTGTTAATGGAACTCCACTATTGTACTGGTC .:.........:.........:.::.x..:.x.:.:xx:....x:..:.:..:.x..:..::.xx.xxxxxx..:..x..x.......xxx......::.x.:.:. 106M 65/106 61.3% 106/94230402 0.0% 0/106 0.0% -67125110 -27105292 +3060 chr4 + 190214555 4761178 4761177 4761215 38 AAAAAAAAAAAAAAGAGAGAGAAAGAGGGAGAGAGAAA chr4 - 94230402 37597028 37597027 37597065 56633338 56633337 56633375 38 AAAAAAAAAAAAAAGAGAGAGGGGGAGGGAGAAAGAAA .....................:::........:..... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -32835850 -61394552 +3300 chr4 + 190214555 4785488 4785487 4785555 68 TACTTTCATTCCCATTTTACAGATGAGGAAACTGAGGCACAGAGTGGCCAAGTGACTTTTTCAATATC chr4 - 94230402 10729195 10729194 10729262 83501141 83501140 83501208 68 TACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....x...x::...........:..:.:.............x.xx..::....:.:..x::..:x:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -5943707 -88286695 +3149 chr4 + 190214555 4828849 4828848 4828902 54 CTCCTTCTCCCTTTCCTTCTTTCTTCTCTTCTCCTCTTTCTTCTTTTCCTCCTC chr4 - 94230402 34220457 34220456 34220510 60009893 60009892 60009946 54 CTCATTCTCCTATTCCTCTTTGCTCCTCTACTCCTCCTTCTTCTTTCCTTTCCC ...x......:x.....::..x..:....x......:.........:.:.:.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -29391608 -64838794 +6803 chr4 + 190214555 4862751 4862750 4862934 184 AAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGC-GCGCGGAGTTCTCCAGCTCGCTCAGCCTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGGCAGAGC chr4 - 94230402 26895919 26895918 26896092 67334311 67334310 67334484 174 AGGATGCGGACGGCGTTCACCAGCACGCAGCTCCTGGAGCTGGAGCGGGAGTTCTCGTCCAACATGTACCTGTCC-CGGCTGCGCCGCATCGAGATAGCCACGTACCTGAACCTCTCCGAGAAGCAGGTGAAGATCTGGTTCCAGAACCGCCGCGTCAAG----------CACAAGAAGGAGGGC .:.x:.......x.x.......x.:.......x....x.........x:.....:xx:xx..xxx..........-:x..:.x..-..::x...x.xx...xx.xx..x.:....x.:....x............x...................:....----------:......:.x..:.. 75M1D9M1I74M10D15M 128/173 74.0% 174/94230402 0.0% 12/173 6.9% -22033168 -72197234 +6337 chr4 + 190214555 4862751 4862750 4862939 189 AAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCGGAGTTCTCCAGCTCGCTCAGCCTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGGCAGAGCTGGAG chr4 - 94230402 9809505 9809504 9809693 84420710 84420709 84420898 189 AAGACGCGCACGGTGTTCAGCCGCAGCCAGGTCTTCCAGCTGGAGTCCACCTTCGACGTGAAGCGCTACCTGAGCAGCTCCGAGAGGGCCGGCCTGGCCGCCTCGCTGCACCTCACCGAGACGCAGGTGAAGATTTGGTTCCAGAACCGCCGCAACAAGTGGAAGCGGCAGCTCGCCGCCGACCTGGAG ...x....x...x:x....x.xx.:xx...x.x:.xxx.......:x..xx...x:.xx.....:x......xx..x.x.....x.x..x.:x:.xx..:x......xx:......:.................x..................:x....xx:...x.:.x:.xx.xx..x..x...... 189M 128/189 67.7% 189/94230402 0.0% 0/189 0.0% -4946754 -89283648 +7718 chr4 + 190214555 4862751 4862750 4863066 316 AAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCGGAGTTCTCCAGCTCGCTCAGCCTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAG-------CCCATGCTGCCACCGGCTGCCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCGGCGGGTGCCTCGCTCTA-CGGTGCCTCTGGCCCCTTCC chr4 - 94230402 9818950 9818949 9819254 84411149 84411148 84411453 305 AAGACGCGGACCATCTTCTCCAAGAGCCAGGTCTTCCAGCTGGAGTCCACCTTCGACGTGAAGCGCTACCTGAGCAGCGCCGAGCGGGCCGGTCTGGCCGCTGCGCTGCACCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCAACAAGCTCAAGAGACAGCTGTCGGCTGAACCCGAGGGTCCGA--------GCCAAGCGGAACCCCCAGGGGAGCCCCCTCCGCCTCCCGCCGCCTCTTTCTCCTTCCCGGCCCTATA-----------CAAGGACAGCGCCCTGCTCAGCCGCTGCCTGCTGCCACTCCC ...x.......xx:....x...xx:xx...x.x:.xxx.......:x..xx...x:.xx.....:x......xx..x.........x..x.:x:.xx..:x:x....xx:......:.................x..................:x....x:x.......x:.x:xx...x..:.:x...::x.:..--------......-------....x.xx:x.x..xx.:....:.x...x.::...:.::..:xx......:::.-----------.:x..xx:.:...::....x:-..x.....x:x...x..:.. 196M8D6M7I54M11D21M1I20M 194/297 65.3% 305/94230402 0.0% 27/297 9.1% -4956199 -89274203 +3074 chr4 + 190214555 4882505 4882504 4882563 59 GGCTAAAAAAAAAAAAAAAAAAAAGAAGTGATAAGAAAAAAAGGAAGCATTTGTGTTTA chr4 - 94230402 53932164 53932163 53932222 40298181 40298180 40298239 59 GGCTAAGGAAAAAGAAAAAAAAAAGCAAGGAGGAACAAAGGAGGAAATATTTGCTTTTA ......::.....:...........x.:x..x:.:x...::.....::.....:x.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -49049659 -45180743 +3112 chr4 + 190214555 4882508 4882507 4882551 44 TAAAAAAAAAAAAAAAAAAAAGAAGTGATAAGAAAAAAAGGAAG chr4 - 94230402 49250048 49250047 49250091 44980312 44980311 44980355 44 TAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAG ..........:............:...:x.::.:.......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -44367540 -49862862 +3153 chr4 + 190214555 4883594 4883593 4883639 46 CTCCTTCTGGAAAAAAACAAAAACAAACAAACAAACAAAAAAAAAA chr4 - 94230402 90093086 90093085 90093131 4137272 4137271 4137317 46 CCCCTTCTGGAAAGAAAGAAAAACAAACAAACAAATACAACAAGAA .:...........:...x.................:.x..x..:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -85209492 -9020910 +3177 chr4 + 190214555 4908664 4908663 4908716 53 CAAAAAACAAACAAACAAACACAAAACAAAACAAAACAAAAAAAACAAAGCTG chr4 - 94230402 7464489 7464488 7464539 86765864 86765863 86765914 51 CATGAAACAAACACACACACACAAAACGAAACAAAAC--AAAAAGCAAAACTG ..x:.........x...x.........:.........--.....:....:... 37M2D14M 44/51 86.3% 51/94230402 0.0% 2/51 3.9% -2555825 -91674577 +3130 chr4 + 190214555 4942070 4942069 4942130 61 TTTTTTTTTTGTTTTGTTTTTGTTTTTTTTAAGAGATAAAACTGAAATAATCATATGGCAA chr4 - 94230402 379400 379399 379460 93850943 93850942 93851003 61 TTTTTGTTTTGTTTTGTTTTTCTTTTTCTTCTGAGGAGAGACTGAAATCTTCAAGTGGAAA .....x...............x.....:..xx...:x:.:........xx...x:...x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 4562670 NA +3116 chr4 + 190214555 4953571 4953570 4953621 51 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATATTGCATCAG chr4 - 94230402 83831176 83831175 83831226 10399177 10399176 10399227 51 TTCTTTTTTTTTTTTTCTTTTTTCTGCATTATTTTTGGCATAGTACATCAG ..:.............:......:.x:x..x.......:...x.:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -78877605 -15352797 +3228 chr4 + 190214555 5100721 5100720 5100789 69 CCTTCCCTTCTTCCTTCTCTTCCTCCCTCCTCCCTCCCTCCTCCCTCCCTCCTTCCCTTCTTCCTTCCT chr4 - 94230402 83554911 83554910 83554979 10675424 10675423 10675492 69 CCTACCTTGACTCATACTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTT ...x..:.xx:..x.x...x.:::::....:....x.....:......:..:....:....::....:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -78454190 -15776212 +3268 chr4 + 190214555 5102880 5102879 5102989 110 TTCTTTCCTTCCTTCCTTCCTTCCTCCCTCCCCTCCCCTCCCTTCTCCTCC--------------CCTCCCCCCTCCCCCTCCTCTCCTTTTTGCCCCTTTCCT-----TTCCTTTTCTTTCTTCCCAC chr4 - 94230402 61964779 61964778 61964907 32265496 32265495 32265624 129 TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGC ....:.x:.x::.......:.:........:....:....:...:..:...--------------.x.:.:..:.....xxx...:..:::.::.x.:::..x:-----:....:.:.x.x..:..::. 51M14I39M5I20M 70/110 63.6% 129/94230402 0.0% 19/110 17.3% -56861899 -37368503 +3259 chr4 + 190214555 5196290 5196289 5196359 70 TTCTTTCCTTTTCCCTCTCTTTCCTCTCCTCTCTTCTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193303 40193302 40193372 54037031 54037030 54037100 70 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ..x....x.:..::......:.x:::.::x...:..xx:.....x................:.....::. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -34997013 -59233389 +3088 chr4 + 190214555 5204384 5204383 5204444 61 AGAGTGTCCTGGGGTTTTTTGTTTGTTTGTTTTTGTTTTTTAGGTTTTTTTTGTTTGTTTT chr4 - 94230402 26096085 26096084 26096145 68134258 68134257 68134318 61 AAAGCAGTTTGGGGTTTCTTGTTTGTTTGTTTTTGTTGTTGTTGTTTTTTTTCCTTTTCCT .:..::x::........:...................x..xxx.........x:..x.::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -20891701 -73338701 +3305 chr4 + 190214555 5209297 5209296 5209379 83 CTGCAGCCTCAAAATCACAGGTTCAAGTAATCCTCCCACCTCAGTCTTTCAGGTAGCTGGGACCACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..:x.:x::.........:x.:.x.xx:x.....:......:........:..:...--.:..::....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -12987829 -81242573 +3061 chr4 + 190214555 5285069 5285068 5285144 76 AAATATATTTTCTCTTAAGATTGTCATAATAGCATTTTAATTTCTCTAGCTTACTTTATTGTAAGATTACAGTACA chr4 - 94230402 60052666 60052665 60052741 34177662 34177661 34177737 76 AAACACATTATTACTTAAAGTCAATATAGCAGCATTGTAAGGTGTTTAGCATACTTTATAGCAAAATTGCAATCCA ...:.:...x.:x.....::.::x:...::......x...xx.x.:....x........x.:..:...:..:.x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -54767597 -39462805 +3452 chr4 + 190214555 5315780 5315779 5315852 73 CTGCAACCTCTGCCTCCTGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:...........:xx...x.xx.x........::::...........:....x..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -12881346 -81349056 +3744 chr4 + 190214555 5316204 5316203 5316387 184 ATATATATTACATAATATATTATATATACAATATTATATATTGTATATATAATATATTATATAGTATATATAATATATTATATACAATATTATATATAATATATA---TATTGTATATTATATATTATATACAATATAATATATTATATC---ATATATTATATATATTATATATATTAATTATATATAT chr4 - 94230402 48211475 48211474 48211657 46018746 46018745 46018928 183 ATACATACGAC-TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCA-----TATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT-TAACATAAAATGTCTTAAAAAATCACTGATTTTCTATATTCCTACTACATAGAT ...:...:x..-.........x...:...x:...xx...x..x.......x....:::.-----...x...x......:.:.xxxx...::.....::..x...:---:....x..:x...::.x...xx.x:..-...:...xx..:..---.x.x..:.:xx..x..x.....x::x.:..:...x.. 11M1D47M5D41M3I27M1D14M3I37M 118/177 66.7% 183/94230402 0.0% 13/177 7.3% -42895271 -51335131 +4495 chr4 + 190214555 5316511 5316510 5316686 176 AATATATATTAC-ATATATAATATATAATATATATTACAT-ATATAATATATAATATATATTACATATATAATATATAATATATATTACATATATAATATATATTATATATTATATATATAATATATAATATA----TTATATATATAATATATAATA-TATATTATA--TATATAATATAATAT chr4 - 94230402 20596459 20596458 20596639 73633764 73633763 73633944 181 AATGTTAATTACCATGTATATCATAACAT---TATAACGTGaaataatatttaataatttgtat-tataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGTTGTCTTATATCTCTACAATGTGATAT ...:.xx.....-..:....x:...xx..---...x..:.-.x.......x.....xx.xx..:-....x..:.x...x.x....xx..................:....x...:..x..:x.......x:..----...x.x:.x......x.:..:-.:.x.....--.x..:...:.:.... 12M1I16M3D8M1I23M1D68M4I21M1I9M2I15M 127/172 73.8% 181/94230402 0.0% 13/172 7.6% -15279948 -78950454 +4052 chr4 + 190214555 5316542 5316541 5316714 173 TATTACATATATAATATATAATATATATTACATATATAATATATAATATATATTACATATATAATATATATTATATATTATATATATAATATATAATATATTATATATATAA---TATATAATAT--ATATT---ATATATATAATATAATATAATAT--ATATCATATTATAATATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATAC-----------TAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATAC-ATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACAGAACA ...........:....:-----------..x.x.....x...xx:...:...x..x......x:......x.......x....:..xx.....:-..:.:xx...x..x...---x..xx.....--.:...---...:......x.x.....xx...--..:x..:.:..:.x..:.x..:. 17M11D66M1D17M3I10M2I5M3I23M2I23M 118/161 73.3% 171/94230402 0.0% 22/161 13.7% -62593517 -31636885 +4215 chr4 + 190214555 5316567 5316566 5316746 180 TATTACATATATAATAT--ATAATATA-TATTACATATATAATATATATTATATATTATATATATAATATATAATATATTATATATATAATATATAATATATAT------TATATATATAATATAATATAATATATATCATATTATAATATATAATATAATAATATATTATATAATATCTTATATAATA chr4 - 94230402 67910059 67910058 67910224 26320179 26320178 26320344 166 TATTACATATACAATACTAAAAATATACTATTAGATACATAATA---------------------AATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATAT-CAACATTTGAATACATATAAGAAAATATTTTATTA-ATGACACACTACATTACA ...........:....:--.x......-.....x...:......---------------------.......x:.....x:............:..:......:------x...x..x...xx.:..xx.....-:.x...x.x.xx.:......x.x....x.x.....-..:.:.:x:..:..x.:. 17M2I8M1I16M21D39M6I24M1D35M1D18M 118/157 75.2% 166/94230402 0.0% 32/157 20.4% -62593492 -31636910 +4561 chr4 + 190214555 5316592 5316591 5316730 139 TATTACATATATAATATATATTATATATTAT---ATATATAATATATAATATATTATATATATAATATATAATATATATTATATATAT--------AATATAATATAA-TATATATC-ATATTATAATATATAATATAATAATATATTATAT chr4 - 94230402 67910059 67910058 67910204 26320199 26320198 26320344 146 TATTACATATACAATACTAAAAATATACTATTAGATACATAATA---AATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATAC---ATATAAGAAAATATTTTAT ...........:....:xx.xx.....:...---...:......---........:......xx...........:..x......:..--------...x...xx.:.-..x.....-.:...xx....:---......x..x.....x... 31M3I10M3D41M8I12M1I8M1I12M3D19M 107/133 80.5% 146/94230402 0.0% 19/133 14.3% -62593467 -31636935 +4378 chr4 + 190214555 5316772 5316771 5316925 154 TATTATATATTATACATATATATTATATATTATATATATTATATATTATATCATATATATTATATATTATA--TATAATATATTATATATATTATATATTATATATAATATATTATATATATTATATATAATATATAATATATATGATATAATATA chr4 - 94230402 48211465 48211464 48211610 46018793 46018792 46018938 146 TATCATAT-CTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGAATCAT----TGGATGATATGCAGTATCAAGGAT-TAACATA ...:....-:........::xx.x.......x...:..:.:........x.:x............:::...--...x......----:.:.x:.....::.....::..x...x.xx:..----.:x..:....::.:...xx.x...-...:... 8M1D62M2I10M4D33M4D24M1D7M 103/144 71.5% 146/94230402 0.0% 12/144 8.3% -42894693 -51335709 +3703 chr4 + 190214555 5316783 5316782 5316888 106 ATACATATATATTATATATTATATATATTATATATTATATCATATATATTATATATTATATATAATATATTATATATATTATATATTATATATAATATATTATATA chr4 - 94230402 22326841 22326840 22326944 71903459 71903458 71903562 104 ATGCATATATA--ATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGATTAAAATACCTAACATTTCATATATAATACATTCGATA ..:........--..::.........:.x.:..:..xx...x......xxx:...x..:....:..:xx.x.x...:x.x.:..x.:..........:...xx... 11M2D93M 73/104 70.2% 104/94230402 0.0% 2/104 1.9% -17010058 -77220344 +3819 chr4 + 190214555 5316792 5316791 5316961 170 TATTATATATTATATATAT------TATATATTATATCATATATATTATATATTATATATAATATATTATATATATTATATATTATATATAATATATTATATATATTATATATAATATATAATATATATGATATAATATATATAATATATATAAT--ATATAATATGTATGATATAAT chr4 - 94230402 48211465 48211464 48211626 46018777 46018776 46018938 162 TATCATAT-CTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACA-----------GCATATACCATATACGATCTATGAATCATTGGATG----ATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAAT ...:....-:....:...:------.....x:...:.xx.:........x.x........x....:::....x...:......:.:.-----------::.....::.....::..x...:.xx:..xx...:----....::.:...xx.x:..--.:....x....x.x.x.x... 8M1D10M6I62M11D35M4D18M2I21M 107/154 69.5% 162/94230402 0.0% 24/154 15.6% -42894673 -51335729 +4147 chr4 + 190214555 5316813 5316812 5317045 233 TATATTATATCATATATATTATATATTATATATAATAT--------ATTATATATATTATATATTATATATAATA--------------TATTATATATATTATATATAATATATAATATATATGATATAATATATATAATATATATA--ATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATAT-AATATATATAAT---ATATAATATATATGATATAATATATTATA chr4 - 94230402 67909970 67909969 67910224 26320179 26320178 26320433 255 TGCACTGTATTGTCTCTTTTACATTTTAGGAATAAAATCACACTTAATTTTTCATACTAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATAT-ACATGTGAGATAAATTTAAGCTG-ATTAAATAT----CAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACA .::.:.:...::.x.x.x...:..x...x:x....x..--------...x.x:...:..x.x.xx..x.:....:--------------.....:.....:x...:xx..x.....x...xx:xx.:......x.....x.:......--..............xx....-.:..:.:x:...x..x...xx.:-.x..x....----:..:..x.-....:......x---....xx...xx....:.:.x..:....:. 38M8I29M14I59M2I20M1D23M1D9M4D8M1I12M3I29M 156/227 68.7% 255/94230402 0.0% 34/227 15.0% -62593157 -31637245 +4252 chr4 + 190214555 5316820 5316819 5316964 145 TATCATATATATTATATATTATATATAATATATTATATATATTATATATTATATATAATATATTATATATATTATATATAATATAT---AATATATATGATATAATATATATAATATAT---ATAATATATAATATGTATGATATAATATA chr4 - 94230402 48211465 48211464 48211610 46018793 46018792 46018938 146 TATCATATCTAT-ACATACGAC---TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT-TAACATA ........x...-.:...:x.:---.........x...:..:.:........x.x.x...........::xx...x...x......---.::.....:x.....xx..x...:.xx:..---..:....::.:...xx.x...-...:... 12M1D9M3D61M3I30M3I21M1D7M 103/140 73.6% 146/94230402 0.0% 11/140 7.9% -42894645 -51335757 +3545 chr4 + 190214555 5316829 5316828 5316988 160 TATTATATATTATATATAATATATTATATATATTATATATTATATATAATATATTATATATATTATATATAATATATAATATATATGATATAATATATATAATATATATAATATATAA---TATGTATGATATAATATATATAATATATATAATATATAATAT chr4 - 94230402 48211465 48211464 48211616 46018787 46018786 46018938 152 TATCATAT-CTATACATACGAC-TAATATATTCTATGTACTGTATAT--TATCTTTTATATATTATATGCCATATTTATCATATATCACA----GCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT---TAACATAAAATGT ...:....-:....:...xx.:-.x......x:...:..:.:.....--...x..x............::x....x..x:......x.:.----::.....x:.....::..x...:.---xx..x.......:xx:...xx.:x..---...:...x...:. 8M1D13M1D24M2D41M4D24M3I26M3D13M 105/149 70.5% 152/94230402 0.0% 14/149 9.4% -42894636 -51335766 +4090 chr4 + 190214555 5316843 5316842 5317084 242 TATAATATATTATATATATTATATATTATATATAATAT--------ATTATATATATTATATATAATATATAATATATATGATATAATA-TATATAATATATATAATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAATATATATGATATAATATATTATATATAT---AATATATATGATATAATATATTATATATTATATA chr4 - 94230402 67909970 67909969 67910214 26320189 26320188 26320433 245 TGCACTGTATTGTCTCTTTTACATTTTAGGAATAAAATCACACTTAATTTTTCATACTAAAAAGGATCTGTAATG---ATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTAT-----ATATAATATGTAGTATATAC-ATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACA .::.x.:....:.x.x.x...:..x...x:x....x..--------...x.x:...:..x.x.x:..x.:....:---...::xxxx:.-.x...x.:.....:....:xx..x..:..:x..xx:...:...xx.x......x:......:...-----.........:..:......:-..:.:x:...x..x.:.xx.:..xx.x...xx.:..---....:....:.x.x.....x....xx..x.:.:. 38M8I29M3D11M1I65M5D20M1D36M3I34M 151/233 64.8% 245/94230402 0.0% 21/233 9.0% -62593127 -31637275 +3830 chr4 + 190214555 5316889 5316888 5317075 187 TATTATATATAATATATAATATATATGATATAATATATATAATATATATA--ATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAATATATATGATATAATATATTATATATATAATATATATGATATAATATATTATA chr4 - 94230402 67910059 67910058 67910224 26320179 26320178 26320344 166 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTAT---ATACATGTGAGATAAATTTAAGCTGATTAAATAT-CAACATTTG--------AATACATATAAGAAAATATTTTAT-TA----------ATGACACACTACATTACA .....:.....xx...:x.x.x....:x...x.x...:......x.....--:......:...:...:....:xx:...---...:..:.:.x...x.x.xx.xx....xx.....-:..:..x.:--------....:....:.x.x.....x....-..----------....:.:.x..:....:. 50M2I27M3D34M1D9M8D24M1D2M10D18M 117/164 71.3% 166/94230402 0.0% 25/164 15.2% -62593170 -31637232 +3166 chr4 + 190214555 5316919 5316918 5317076 158 TAATATATATAATATATATAATATATAATATGTATGATATAATATATATAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAATATATATGATATAATAT----ATT---ATATATATAAT---ATATATGAT--ATAATATATTATAT chr4 - 94230402 67910059 67910058 67910220 26320183 26320182 26320344 162 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTAT--------ATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACAT ..x..:.....xx...:xx..x.....x...xx:xx.:......x.....x.:......:......xx....:.::...--------...:..:.:.x...x.x.xx.xx....xx.....----...---...:......x---....x.x..--..:.:.:.:..:.. 79M8D34M4I3M3I11M3I9M2I14M 105/150 70.0% 162/94230402 0.0% 20/150 13.3% -62593140 -31637262 +3731 chr4 + 190214555 5316967 5316966 5317170 204 TAATATATATAATATATAATATATATGATATAATATATAATATATATAATATATAATATATATGATATAATATATTATATATATAATATATATGATATAATATATTATATATTATATATATAATA-TATATGATATAATATAT----AATATATATAATACATTATAATATATAATATATATGTATAATATACATATTACATATATATA chr4 - 94230402 48211458 48211457 48211660 46018743 46018742 46018945 203 TAACCTTTATCATATCTA-TACATACGAC-TAATATAT--TCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAAT--CACTGATTTTCTATATTCCTACTACATAGATGCA ...:x.x...x....x..-..:...:..:-........--.x...:..x.:....x...x.x.x.....x.....xx:....x..x:......x.:.xx.....::.....:x..x...:x.x:.-.:x.......:xx:...----:..xx.:....x.::.:x...x.x..--:.:xx..x.x:x....x.x..:......x..::. 18M1D10M1D8M2D85M1I17M4I26M2D34M 131/198 66.2% 203/94230402 0.0% 11/198 5.6% -42894491 -51335911 +3167 chr4 + 190214555 5321991 5321990 5322051 61 TGCCTCAAGTCAAATTAAAAAAAAAAAAAAAGTGGTGGGAGTGGGGGTGGGGGGTTGGGCT chr4 - 94230402 22079268 22079267 22079328 72151075 72151074 72151135 61 TGTTTCAAGTGAGGTTAAAAAAAAAAAAAAAGGAAAGGGGGGGGGGGTGGCAGAGGGGGCT ..::......x.::..................x::x...:.x........x:.:xx..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -16757277 -77473125 +3037 chr4 + 190214555 5336969 5336968 5337027 59 TTTTGTTTTTGTTTTTGTTTTCTGTTTCTTGAGACAGAGTTTTGCTGTCGTTCAGGCTA chr4 - 94230402 65741001 65741000 65741059 28489344 28489343 28489402 59 TTTTGTTCTTGTGTTTGTTTTTTTTTTTTTCAAACCAAGTCTTGCTTTCTTTAGAGCTA .......:....x........:.x...:..x.:..x:...:.....x..x..x::.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -60404032 -33826370 +3073 chr4 + 190214555 5356998 5356997 5357136 139 CTCATATGTGTATATATATATATA-TACACACACACACACACACATATATACACACA------------------------------------CACATATATACACACATATACACACACACACGTATACACACACACACACACACACACATATATATACACACACC-TTGAGTGAA chr4 - 94230402 14964727 14964726 14964895 79265508 79265507 79265676 169 CTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACAC--------ACACACACTGTTGACTGAA ......x:......x...:.x:.:-.:x:...x:...x.x.::...x.:.....x..------------------------------------....x....::x::.:.:.:.....::::.:.....:...xx........::.....--------........:-....x.... 24M1I32M36I57M8D9M1I9M 91/131 69.5% 169/94230402 0.0% 46/131 35.1% -9607729 -84622673 +3080 chr4 + 190214555 5357004 5357003 5357050 47 TGTGTATATATATATATATACACACACACACACACACATATATACAC chr4 - 94230402 24136216 24136215 24136262 70094141 70094140 70094187 47 TGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ...x......:.....:.....x...x...x..........x..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -18779212 -75451190 +3396 chr4 + 190214555 5357004 5357003 5357075 72 TGTGTATATATATATATATACACACACACACACACACATATATACACACACACATATATACACACATATACA chr4 - 94230402 66904840 66904839 66904911 27325492 27325491 27325563 72 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ...x.x:......:..::..........:.........:....x:.x::x..x:.:......xx....::.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -61547836 -32682566 +3984 chr4 + 190214555 5357005 5357004 5357113 109 GTGTATATATATATATATACACACACACACACACACATATATACACACACACATATATACACACATATACACACACACACGTATACACACACACACACACACACACATA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ....::..::....x:.......:.:.....x.x:...:x:....:..::.:.x:..:..:x::....:::x::...:.::x....:.x....x.x.......:::... 109M 67/109 61.5% 109/94230402 0.0% 0/109 0.0% -67764096 -26466306 +4043 chr4 + 190214555 5357010 5357009 5357121 112 TATATATATATATACACACACACACACACACATATATACACACACACATATATACACACATATACACACACACACGTATACACACACACACACACACACACATATATATACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.::..::....x..:.....:.:.....x.x::..:x::...:..:....x::....:x:..:.::::x::..:....x.:..:.x....x.x........:....x:.. 112M 69/112 61.6% 112/94230402 0.0% 0/112 0.0% -67764092 -26466310 +3504 chr4 + 190214555 5357024 5357023 5357084 61 CACACACACACACACACATATATACACACACACATATATACACACATATACACACACACAC chr4 - 94230402 7596412 7596411 7596472 86633931 86633930 86633991 61 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGC ..:...x.::..:...x..:....:......:...:......x........x:..:...:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -2239388 -91991014 +3417 chr4 + 190214555 5357034 5357033 5357117 84 CACACACATATATACACACACACATATATACACACATATACACACACACACGTATACACACACACACACACACACACATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::::...:.:::..:.x....:...x:...:..:..::.x:...:xx:..:...............x.....x..:x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -3038753 -91191649 +3408 chr4 + 190214555 5357036 5357035 5357119 84 CACACATATATACACACACACATATATACACACATATACACACACACACGTATACACACACACACACACACACACATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::.:...:::::..:.x.:..:..:x:......::.::.x:...:xx...................x.....x..:x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -3038751 -91191651 +3046 chr4 + 190214555 5357039 5357038 5357089 51 ACATATATACACACACACATATATACACACATATACACACACACACGTATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ......:..:.....x....:...:......:.....:..x....x:.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -23113328 -71117074 +3064 chr4 + 190214555 5357065 5357064 5357115 51 ACACATATACACACACACACGTATACACACACACACACACACACACATATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ...:..:..:.....x...:....:........:...:..x....x..x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -23113302 -71117100 +3008 chr4 + 190214555 5357070 5357069 5357132 63 TATACACACACACACGTATACACACACACACACACACACACATATATATACACACACCTTGAG chr4 - 94230402 90815417 90815416 90815479 3414924 3414923 3414986 63 TATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTTTCAG ...::......:..xx.:.:......:...x.....::....:...x::....x..::..x.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -85458347 -8772055 +3002 chr4 + 190214555 5370955 5370954 5371021 67 GAAGCAAGACACTATCTAAATATATATATATGTGTGTGTGTGTATATATATATATATGTATATATAT chr4 - 94230402 9151827 9151826 9151893 85078510 85078509 85078576 67 GATGTAACACAATCTTTCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ..x.:..x...x.x.:.x...::x.x.xx:.............:........x....x.:....... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -3780872 -90449530 +3073 chr4 + 190214555 5370962 5370961 5371007 46 GACACTATCTAAATATATATATATGTGTGTGTGTGTATATATATAT chr4 - 94230402 26564526 26564525 26564571 67665832 67665831 67665877 46 GAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ..x....xx.x...x.......................:....... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -21193564 -73036838 +3110 chr4 + 190214555 5370973 5370972 5371060 88 AATATATATATATGTGTGTGTGTGTATATATATATATATGTATATATATGTGTATATATATGTATATATATGTGTGTGTGTGTGTATA chr4 - 94230402 81401286 81401285 81401373 12829030 12829029 12829117 88 AAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ..x.x.x....x.x.....x.....x..x.x.......::..x:x:..::....x:.:.:...:....x....x::.:..x:....:. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -76030313 -18200089 +3202 chr4 + 190214555 5370973 5370972 5371026 54 AATATATATATATGTGTGTGTGTGTATATATATATATATGTATATATATGTGTA chr4 - 94230402 81378295 81378294 81378348 12852055 12852054 12852108 54 AATAAATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGATTTGTA ....x...............x....::...:......::..x..:.x..x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -76007322 -18223080 +3052 chr4 + 190214555 5370997 5370996 5371057 61 TATATATATATATATGTATATATATGTGTATATATATGTATATATATGTGTGTGTGTGTGT chr4 - 94230402 19704277 19704276 19704337 74526066 74526065 74526126 61 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x...:.......:........x.......:.x:....:.:.:.:....x:.x.xx.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -14333280 -79897122 +3271 chr4 + 190214555 5371004 5371003 5371059 56 ATATATATGTATATATATGTGTATATATATGTATATATATGTGTGTGTGTGTGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x..::.......:..:.....x.:.....:.x:...............x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -14333270 -79897132 +3241 chr4 + 190214555 5397628 5397627 5397682 55 GTGCTCCTCTGTGTGTCTGTGGGTGTGTGTACGTGTATATGTTGTTTTGTTTTTA chr4 - 94230402 70212916 70212915 70212970 24017433 24017432 24017487 55 GTACTCCTCTAAGTGTGTAGGGGTGTGTGTGTGTGTATATGTTTATTTATTTTCA ..:.......:x....x.:x..........::...........xx...:....:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -64815288 -29415114 +4045 chr4 + 190214555 5415270 5415269 5415363 94 CGACAGCCTTCTGAGATGGGTATTTTATTATCATCATC-CCATTTTATAGGTGAGGAAACTGAAGCCCAGGGAGATTAAATTATTTGCCCAAGGT chr4 - 94230402 10729171 10729170 10729261 83501142 83501141 83501232 91 CAATACCCCTGTGAGGTAGGTA----ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT .:.:.x..:.x....:.:....----....::....x.-........:.....:.:.......:..x..x:x..:....:.x.........::.. 22M4D12M1I56M 67/90 74.4% 91/94230402 0.0% 5/90 5.6% -5313901 -88916501 +3005 chr4 + 190214555 5434432 5434431 5434472 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -84386849 -9843553 +3351 chr4 + 190214555 5434439 5434438 5434484 46 TGTGTGTGTGTGTGTGTATATATATATATATATATGATTTTTATAT chr4 - 94230402 19559296 19559295 19559341 74671062 74671061 74671107 46 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTAT ...............:..............:.xx.:......:... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -14124857 -80105545 +3039 chr4 + 190214555 5457203 5457202 5457272 70 TTTTTTTTTCTTTTTTTTTTTTTTTTTTTAATATACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAG chr4 - 94230402 24681990 24681989 24682059 69548344 69548343 69548413 70 TTTTTTTTTCTGTTTTGTTTTGTTTTTTTAATATATATAATCCTTCTGTGGTTTCCATGCTAAAAAACAG ...........x....x....x.............::x.:..::x..x..x:x:...x...::.:x:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -19224787 -75005615 +3302 chr4 + 190214555 5479067 5479066 5479138 72 TTTCTTTTTCTTTGTTCTTGTTTTTTGTTGGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTT chr4 - 94230402 59546947 59546946 59547018 34683385 34683384 34683456 72 TTTCCTTTTTTAAATGTTTGTTGGTTGGTGGGTTTTGTTTGTTTGTTGTTCTTACTGTGTTTTATTTATTTT ....:....:.xx:.x:.....xx...x...x...............x..x..x:...x....x...x.... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% -54067880 -40162522 +3131 chr4 + 190214555 5479090 5479089 5479138 49 TTTGTTGGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTT chr4 - 94230402 26096092 26096091 26096140 68134263 68134262 68134311 49 TTTGGGGTTTCTTGTTTGTTTGTTTTTGTTGTTGTTGTTTTTTTTCCTT ....xx.x..:...................x.....x........::.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -20617002 -73613400 +3452 chr4 + 190214555 5602266 5602265 5602336 71 AGCTACAGAGCAAGACATTGCCTCTTAAAAAAAAAAAAAAAAAAAAAAAGTAAAAAGAAGTGGATTAAATT chr4 - 94230402 78803731 78803730 78803798 15426605 15426604 15426672 68 AACTACATGACAA---ATAGTCTCTTAAAAAAAACAAAAAAAAAACAAGGTAAAAATGAATGCATTAATTT .:.....x::...---..x.:.............x..........x..:.......x:.:..x.....x.. 13M3D55M 54/68 79.4% 68/94230402 0.0% 3/68 4.4% -73201465 -21028937 +3078 chr4 + 190214555 5617843 5617842 5617883 41 AACCTGTTGGGGAACAAGGGAACAGGACAGGAAAGGGAAGA chr4 - 94230402 45474166 45474165 45474206 48756197 48756196 48756237 41 AACTTGCTGGGGAACAAGGGGACAATGCAGGAAAGGGAAGA ...:..:.............:...:x:.............. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -39856323 -54374079 +3596 chr4 + 190214555 5621384 5621383 5621501 118 TAGTTTTTGTGGTCTTCATTTTACAAGTGGGAAAGCTGAGGCCCAGAGAGGTTAAACAAGTTGCACAAACT-TAAGTGGTGGTCCTGGGTCTTTTGGTCTACATTGCCCATGTCTCATT chr4 - 94230402 10729191 10729190 10729309 83501094 83501093 83501212 119 TAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCCAGGTATGTGGGTGTGTGACACCCATCTTCTGTT ..:..x:.:.x:x..:.........:........:.......x..x.x.......::..x....x..:.x.-.::..:xx.:x:.::...x.x.x...x.:::x::.....x.::::.. 71M1I47M 74/118 62.7% 119/94230402 0.0% 1/118 0.8% -5107807 -89122595 +3288 chr4 + 190214555 5623721 5623720 5623832 112 AAGCCCAGGAGACAGACCGCCTGGGTTCCAGTCCTGGCTCCTCTACTCACAAGCTGAGTGACCCAAAGCAGGTATTTTACCCTCTCTGCGCCTCCATTTCCCTATCTGTAAA chr4 - 94230402 60684639 60684638 60684749 33545654 33545653 33545764 111 AGGCACAGAAGTCA-AGTACCTCAGACCTGTTCTTGGCCCCACTGCAGACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAA .:..x...:..x..-.x::...x:.x:.::x..:....:..x..:.xx..xxx...x.::::.::.:...:..:x.x.xx........:...:........::x........ 14M1D97M 69/111 62.2% 111/94230402 0.0% 1/111 0.9% -55060918 -39169484 +3866 chr4 + 190214555 5671587 5671586 5671669 83 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx.x..:...........:.x...x.xx.x.........:...........:.:....x.:..--:....::.. 72M2D9M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% -12525539 -81704863 +3171 chr4 + 190214555 5679024 5679023 5679119 96 CTAAGAAAAAAAAGAAAGAAAGAAAAGAAAAATATGTACAAAAGACAAAAAAAAAAATACACTCGT------ATAGGAA---------ATGTATCATAACTCGAGCTTGCA chr4 - 94230402 9331553 9331552 9331663 84898740 84898739 84898850 111 CTATTAAAAATGAAAAGGAAAGAGAGGAAAAAGATGTACCAAATACAGGGAAAAAAATGTCCTTTTTTTGTAATAGTAAAAAATAATTATGTACCATGATGGTGGTTTGCA ...xx.....x:.:..:......:.:......x......x...x...:::........::x..:x.------....x..---------.....:...:.:xxx:.:..... 66M6I7M9I23M 68/96 70.8% 111/94230402 0.0% 15/96 15.6% -3652529 -90577873 +3253 chr4 + 190214555 5712274 5712273 5712323 50 TGTCTCTGCTTTGCAGATGAGGAAACTGAGGCACAGAGAGGTTAAGCAAC chr4 - 94230402 73089453 73089452 73089502 21140901 21140900 21140950 50 TGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAAC ....:...:....:....x......x..........x.....x..::... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -67377179 -26853223 +3144 chr4 + 190214555 5712277 5712276 5712327 51 CTCTGCTTTGCAGATGAGGAAACTGAGGCACAGAGAGGTTAAGCAACTTAC chr4 - 94230402 10729204 10729203 10729254 83501149 83501148 83501199 51 CTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGC ...:::...:...:..:.:.............x.x........:..:..:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -5016927 -89213475 +3143 chr4 + 190214555 5728966 5728965 5729045 80 ATCTATCTCTCCACCTTTTCATTCACCCATCTGTCTGTCCATCCTTCCATCCAACCACCCATCTATTCATCTGTCTACCT chr4 - 94230402 57186242 57186241 57186316 37044087 37044086 37044161 75 ATCCATCCTTCTGTCTTCACCTCTATCCACCTTTTTGTCCCTCCCTCCATCCAACCACCT-----TGCAGCAGACTACCT ...:...::..:::...:x.x.::.:...:..x.:.....x...:..............:-----.x..x.x.x...... 60M5D15M 53/75 70.7% 75/94230402 0.0% 5/75 6.7% -51457276 -42773126 +3251 chr4 + 190214555 5749229 5749228 5749299 71 CCCCTGGTGCATGGGTGTCCAACCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGAAGAATTGTCTTAGGC chr4 - 94230402 46972091 46972090 46972161 47258242 47258241 47258312 71 CTCCTACTACAGAGGTCTCCAACCCTTGGGCTTACCTGGGCTACGTGGACTGGAGAGGAACTGCATTGGGC .:...:x.:..x:...x.......:..x.....x.......:..:.x.:xx.:...:...:..:x..:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -41222862 -53007540 +3894 chr4 + 190214555 5749235 5749234 5749307 73 GTGCATGGGTGTCCAACCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGAAGAATTGTCTTAGGCCACACATA chr4 - 94230402 50314694 50314693 50314766 43915637 43915636 43915709 73 GCACATGGGCATCCAAACTTTTGTCTTATCTGGGACACATTTAGTGAAAAGAAATTATCTTGGACCACATATA .::......::.....x......x...x:.....x......x::x...:.::....:....:.:.....:... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -44565459 -49664943 +3473 chr4 + 190214555 5749238 5749237 5749310 73 CATGGGTGTCCAACCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGAAGAATTGTCTTAGGCCACACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ..x.:x.:.........:..x........:......x..::x...x.:.....::..x:...::..:x...:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -4136619 -90093783 +3087 chr4 + 190214555 5800336 5800335 5800378 43 CTCTGTCTAAAAAACAAACAAACAAACAAAAAACAGAAAAGCA chr4 - 94230402 76380029 76380028 76380071 17850332 17850331 17850374 43 CCTTATTAAAAAAACAAACAAACAAACAAAAAACCGAAAAGCA .::.:.:x..........................x........ 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -70579693 -23650709 +3820 chr4 + 190214555 5831024 5831023 5831106 83 CTATAGCCTCCAAGTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCTCAAGTAGCTAGGACTACAGGCATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ...:....:xx.:x.:.....:.....::x.:.x.xx.x........:..........:.:......--.:........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -12366102 -81864300 +3055 chr4 + 190214555 5842235 5842234 5842279 45 CTCAAAAACAAACAAAACAAACAAACAAAAAACACAAATTAGCCA chr4 - 94230402 76138888 76138887 76138932 18091471 18091470 18091515 45 CTTAAAAGCAAACAAAACAAACAAACAAAAAAATCAAATGAATCA ..:....:........................xx.....x.::.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -70296653 -23933749 +3137 chr4 + 190214555 5844372 5844371 5844439 68 GGGGAATGGAGGGAAGGGGAGGAAGGGAAGAAAGCCAGGAGGGAGGGAGAAGAGGCGAGGAAGGGAGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGA---GAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG .....---.........:...:..:.:.....:.x.:.:x....:.:.:.:.::...:..:x...:.. 5M3D60M 46/65 70.8% 65/94230402 0.0% 3/65 4.6% -63222313 -31008089 +3126 chr4 + 190214555 5851747 5851746 5851809 63 AGAGGAGAAGGAGGAGGATGAAGAGGAGGAGAAAGAGGACAAGGAGGAAGAGGAAGAGGAGGA chr4 - 94230402 75402124 75402123 75402186 18828217 18828216 18828279 63 AGGGGAGATGGGCGAAGACGTGGAGGTGGTGCAAGAGGGCAAGGAGGGAGGGGTCGTGGAGGA ..:.....x..:x..:..:.x:....x..x.x......:........:..:..xx.x...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -69550377 -24680025 +3490 chr4 + 190214555 5851794 5851793 5851875 82 AAGAGGAAGAGGAGGAAAAAGAAGAGGAGGAGAAAGAAGGAGAAGGGGAGGAGGAGGAGGAAGAGGAGCAGGAGGAGGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ..........x..x..x:..x.x.xx.:x..xx....:.:...:.x...:............:x...x......::x..x.. 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% -53470354 -40760048 +3400 chr4 + 190214555 5851945 5851944 5852019 75 GAAAGGGAGAAGAAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGAAAGAGGACGAGGAGGAGGAG chr4 - 94230402 23858009 23858008 23858083 70372320 70372319 70372394 75 GAGAAGTATCAGAAGGAGCAAGACAAACTGAAGGAGGAATGGGAAAAGGCACAGAGAGAAGTTGAAGAGGAGGAG ..:.:.x.xx........x....x:..xx.:........x:....:...x:x...:...:.x:..:......... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -18006064 -76224338 +4264 chr4 + 190214555 5862881 5862880 5862965 85 CTGCAGCCTCAACTTGCTGGGCTCAAGCGATCCTCCCGCCTCAGCCTCTCAAGTAGCTGGAACTACACAGGCTTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG----TGCACCACTGTG ..:.....:x..x:.x.....:.....:.x.:.x.xx.x........:....................:----........::.. 69M4D12M 63/81 77.8% 81/94230402 0.0% 4/81 4.9% -12334245 -81896157 +3216 chr4 + 190214555 5868257 5868256 5868319 63 ATATCTATATATATATATATATATATATATATATATATATATATATACATAATTTTTTTTTTT chr4 - 94230402 8681917 8681916 8681978 85548425 85548424 85548486 62 ATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTT .....:..:.x.:-.....x..........:...::.:.:.:...:.:....:.:........ 13M1D49M 47/62 75.8% 62/94230402 0.0% 1/62 1.6% -2813660 -91416742 +3632 chr4 + 190214555 5874687 5874686 5874817 131 GGAGTGCAAAGGAGAG--AAAAGGAAGAAGAGATAAAAGAAGGATAAAGAGGAAAGGAAAGATGGAAGGAGGAGGAAAGAAAGGAGAGAAGAGAG--AAACAAAGGGAGAAAAGAATACATGGACACATAATAAA chr4 - 94230402 11253629 11253628 11253763 82976640 82976639 82976774 135 GGGGTGAGAAGGTGATTTAATATGAAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGA ..:...x:....x..x--..x.x........:..:..:....:....x:.:.::::xxx...::...::....::::...:........x.....--.x.....::.x::.x:...x.xxx...x.x.:..x.:. 16M2I77M2I38M 83/131 63.4% 135/94230402 0.0% 4/131 3.1% -5378942 -88851460 +3258 chr4 + 190214555 5912044 5912043 5912110 67 TTGCAAAACAAAAAAACAAAAAACAAAAAAACCACACAAACAAACACAAACAAACAAAAATACCAGA chr4 - 94230402 32791057 32791056 32791123 61439280 61439279 61439346 67 TTGCAATACTACTAAAAAAAAAAAAAAAAACCCACAAAAACAAACCCAAACACAGAACAGCAACAGA ......x..x.xx...x......x......x.....x........x......x.x..x.::.x.... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% -26879013 -67351389 +3317 chr4 + 190214555 5932511 5932510 5932583 73 CTGCAGCCTCGACCTCCCAGGCTCAATTGATCCTCCCGCCTCAGCCTCCTGAGTAGCTGCAACTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x:.x..:.::..:....x..x.:.x.xx.x........::::........x.......x..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -12264615 -81965787 +3237 chr4 + 190214555 5962906 5962905 5963018 113 TTACCATTCCTCCAAATGCCTCATGGACACTCATCCTCCCATCTTTTTACAAGTACTCCCTTCGCCTAAAATATTTTCTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 56516891 56516890 56516998 37713405 37713404 37713512 108 TTACTATTCCTTATCACGGCT-----ATTTTCATTTATATATTTTTTGACAAGTAACCAATCCATCTAATATCTCTTTGTTTTGGTTTTGTTTTCCTGTTTGTTTTTTTTTTT ....:......:xxx.:.x..-----.:x:....::x:x:..:....x.......x:.xx.:.::....x..x.:..:x.:..xx....x.....:.x...x........... 21M5D87M 71/108 65.7% 108/94230402 0.0% 5/108 4.6% -50553985 -43676417 +4386 chr4 + 190214555 6010864 6010863 6011002 139 TTAAATACCTACTGTTGGGAGTCT---TTTACATGTATCAACTTAGCCCACACAACAATCTGAGGGGATTGGTACT--ATATCATTCCCACTTCACAGATGAGGAAACTGAGGCCCAGAGAGGTTAAGTCACTTGCCCAAGGTC chr4 - 94230402 10729120 10729119 10729262 83501141 83501140 83501283 143 TTATGTACTCACTCTGAAGATCCTGAATAAACAGGAATTGATTTAGCCT-CACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...x:...::...x.x::..x:..---.xx...x.x..::.:......:-.....:.x:.:x:x.:.:.x....x.--x.....x::...:..:....:..:.:..........x..x.x.........x.:.......::... 24M3I22M1D26M2I66M 93/138 67.4% 143/94230402 0.0% 6/138 4.3% -4718256 -89512146 +3033 chr4 + 190214555 6010938 6010937 6011010 73 TATCATTCCCACTTCACAGATGAGGAAACTGAGGCCCAGAGAGGTTAAGTCACTTGCCCAAGGTCACACAGCT chr4 - 94230402 15193221 15193220 15193293 79037110 79037109 79037182 73 TATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCT ...:x.:.x..:..:.:.xx..::.:..:...::.:....x.::.x..:.x....x..:.......:...... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -9182283 -85048119 +4068 chr4 + 190214555 6058985 6058984 6059063 79 TGTGTTAGGTA-TTATTATTAGCCCCATTTTAAAGATGAGGAAACGGAGGCACAAAGAGATTATGTTACTTGCCCAAGGT chr4 - 94230402 10729182 10729181 10729261 83501142 83501141 83501221 80 TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ..x.x......-...:...:...:........x..:..:.:....x........x.x..:...x..x.:.......::.. 11M1I68M 61/79 77.2% 80/94230402 0.0% 1/79 1.3% -4670197 -89560205 +3082 chr4 + 190214555 6079790 6079789 6079830 41 AAGCTAAAAACCAACCAACCAACCAACCAAACAAACAAAAA chr4 - 94230402 63063423 63063422 63063463 31166940 31166939 31166980 41 AAGGCAAAAAAAAACCAACCAACCAACCAAACAAACAAAAA ...x:.....xx............................. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -56983633 -37246769 +3379 chr4 + 190214555 6095083 6095082 6095140 58 TGGGGGAGGGAGGAAGGGGAGAGAGAGGAAGGGAAAGAAAAGAAAGAGGGAAATGAAA chr4 - 94230402 43294274 43294273 43294331 50936072 50936071 50936129 58 TGGGGGGTGGGGGGAAGGGAGAAAGAGGAAAGAAAAAAAAAAAAGGGGGGGAAATAAA ......:x..:..:.:......:.......:.:...:....:..:.:...:..xx... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -37199191 -57031211 +3761 chr4 + 190214555 6095130 6095129 6095291 162 GGGAAATGAAAGAAAAAGAAAGGAGCAAAGGAAGGAAGAAGGGAAGGAAAGGAAGAAGAAAGGAAGGGAGGAGGGAAATAGAAGAAAGAAGGAAAGAAAAGAAAGGAAAGGAGCGAAGGAAAAAGGGAAGG--AAAGGAAGAAAGGAAGGAAGGGAGGGAGGGA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAA---------------AGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .:::....:.:..:.......:..:x:.::x...:..:x:....:.x:::xxxx........:.---------------......x.:..:x:..x.x..::..x::..:..:.:.x.x....:x..:x..--..............::.x..x...:x..::. 64M15D52M2I31M 91/147 61.9% 149/94230402 0.0% 17/147 11.6% -37958858 -56271544 +3577 chr4 + 190214555 6098470 6098469 6098600 131 AGGGAAGGAAAGAAAGAAAAGAGAAAGAAAAGAAAGGAAAGGAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATA-AGTAGGAGATAAAAGGA---AAATAAAGACTCACAAAAAGAGATATGTGAA-GAAGAGAGAA ......:..:.x.x.:.x.xx....::x.......:x..::........x..x.:.x.:...:...x.-..x.:..:.x.:..:..---...x.....xxx.x.:.....:.x.x.x:..-.....:.... 68M1D17M3D31M1D10M 86/126 68.3% 126/94230402 0.0% 5/126 4.0% -39256942 -54973460 +3893 chr4 + 190214555 6098470 6098469 6098630 161 AGGGAAGGAAAGAAAGAAAAGAGAAAGAA------AAGAAAGGAAAGGAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAA chr4 - 94230402 65901806 65901805 65901972 28328431 28328430 28328597 167 AAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGACAATATAAAATGGAAAAACATTGGAAGCAGAGAACAATAGACAGGGAGAAA .::....xx..:.x..:x:.::....x..------.:....x.x.......:..::..xx..::x:......:.:..x.::.x...x:..:.xx:...x.x.:..:..:.:.x...x.:x.x:...x.:.:...x.xx.....x.:....x:.x.:.x.:::..... 29M6I132M 97/161 60.2% 167/94230402 0.0% 6/161 3.7% -59803336 -34427066 +3095 chr4 + 190214555 6098508 6098507 6098584 77 AAGGAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 226471 226470 226547 94003856 94003855 94003932 77 AAGGACAGAATAACAAATGTGAGAGAGAGAGAAAAAAAAAAAACAGTAATTAAAACAGAGAGGAAAAAGAGAAGGGA .....x:...x:.x:..x.x............:...:.....:x.:x..xx...:x.:::.:....:.:....:.:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 5872037 NA +3222 chr4 + 190214555 6098536 6098535 6098621 86 GAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGA-AAAGAAAAAG ....:.x..xx..x.....x...::...:.........:.x..x.:xx.::::::....:.:..x...:.x..:.-.......... 75M1D10M 58/85 68.2% 85/94230402 0.0% 1/85 1.2% -30759757 -63470645 +3216 chr4 + 190214555 6098539 6098538 6098644 106 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG-GAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAG chr4 - 94230402 54827386 54827385 54827491 39402912 39402911 39403017 106 AGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAA-GAGACAGAAGGAAGGAAGACAAAG .....:....:.x.......::.x...x....xxx.:xx.x:..x..-.:.::.....x..x..x::xx.....:.:.....-..:.x....:...:...:.x.... 47M1I34M1D24M 71/105 67.6% 106/94230402 0.0% 2/105 1.9% -48728847 -45501555 +3338 chr4 + 190214555 6098539 6098538 6098644 106 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG-GAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAG chr4 - 94230402 54828363 54828362 54828468 39401935 39401934 39402040 106 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAG-GAGGAAAAGAGACAGAAGGAAGGAAGACAAAG .....:....:.x........:.x...x....xxx.:xx.x:..x..-.:.::.....x..x..x::xx.....-:..:......:.x....:...:...:.x.... 47M1I26M1D32M 72/105 68.6% 106/94230402 0.0% 2/105 1.9% -48729824 -45500578 +3922 chr4 + 190214555 6098559 6098558 6098772 214 AAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGGAAGAAAGAAAGGA-AGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAGAA---------AGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAAGA chr4 - 94230402 56098324 56098323 56098548 38131855 38131854 38132079 225 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA .:...x.::x..x....x..x:......:.x...::x..x......-.x:x:x..xx.x.x.x::.:.:.x:..:x:.:x..::........xxxx..:..xx:.:..:.::xx.:....:---------.:.x....:...-...:..xx.:....x.:...::...:....:.....x....::.:.:.::..:.xx:::..:.xxx...::....xx..x.. 46M1I74M9I12M1I82M 125/214 58.4% 225/94230402 0.0% 11/214 5.1% -49999765 -44230637 +3644 chr4 + 190214555 6098568 6098567 6098682 115 AAGAAAGAAAGAAAGAAGGAAAGGAAGA--AAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGA-----AGAAAGAGA-----GAGAAAGAAAGAA chr4 - 94230402 45355411 45355410 45355537 48874866 48874865 48874992 127 AAGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA ...::.:.:...x.x..:x.xx:.....--......:x....:...:...x..x...x.........x.::x.:..:.x...:.:..::x..:..-----.:.......-----..::....:.... 28M2I65M5I9M5I13M 80/115 69.6% 127/94230402 0.0% 12/115 10.4% -39256843 -54973559 +3064 chr4 + 190214555 6098576 6098575 6098628 53 AAGAAAGAAGGAAAGGAAGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGA chr4 - 94230402 23275942 23275941 23275994 70954409 70954408 70954461 53 AAAAAAGAAGAAAAAGGAGAAAGAATGGAAGAAATTACCGAAACAGAAAAGGA ..:.......:...:.:........x........xx.xx....x......:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -17177366 -77053036 +3127 chr4 + 190214555 6098581 6098580 6098664 84 AGAAGGAAAGGAAGAAAGAA-----AGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAA chr4 - 94230402 82357147 82357146 82357235 11873168 11873167 11873256 89 AGCAGGAAAAAAAAAAAAAACATGAAGGTAAAATTGTCTGCAATGGAAACAGGAAGGAAAAAAAGAGGGAAAGAAAAGGAAAGCCAAAA ..x......::..:...:..-----...x.:..xx.xxx.x..x:....x..:...:..:......::.....:.........xx.:.. 20M5I64M 59/84 70.2% 89/94230402 0.0% 5/84 6.0% -76258566 -17971836 +3254 chr4 + 190214555 6098585 6098584 6098665 81 GGAAAGGA---AGAAAGAAAGGAAGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAA chr4 - 94230402 7711323 7711322 7711406 86518997 86518996 86519080 84 GGAAAGCATTCAGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ......x.---.....:xx...::xx...::x.............:...:.:.:....xx:.:.x.:..:...:.:........ 8M3I73M 57/81 70.4% 84/94230402 0.0% 3/81 3.7% -1612738 -92617664 +3164 chr4 + 190214555 6098589 6098588 6098725 137 AGGAAGAAAGAAAGGAAGAAAAGAA-AGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGG------AAAGGAAAG---GAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAA------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAA chr4 - 94230402 42084009 42084008 42084161 52146242 52146241 52146394 153 AGCAAAAGGGAGTAGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAAGCACAAA ..x..:.::..:x:....x::....-...:......:..:..:xxx........x.x.x.x.------.....:...---.x..:..xx..x....::.x.:x:....xx.:.------:...:...:....:.:.:....:....:x.x... 25M1I36M6I9M3I33M6I34M 91/137 66.4% 153/94230402 0.0% 16/137 11.7% -35985420 -58244982 +3113 chr4 + 190214555 6098605 6098604 6098720 116 AGAAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 55334390 55334389 55334505 38895898 38895897 38896013 116 AGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAG ....:.x::.x..::..x..xx::....::::::....:x..x:x.x.:.:.......:....x.x......:..:...:...x:::.x.x..::....::.::::x..x:x.... 116M 66/116 56.9% 116/94230402 0.0% 0/116 0.0% -49235785 -44994617 +4069 chr4 + 190214555 6098618 6098617 6098732 115 AAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAG---GAAAGGAAGAAAGAG----AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ...x......:.............::.:.::.....---.x:.::...x..::.----...x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.:.:...x:.. 36M3I15M4I64M 78/115 67.8% 122/94230402 0.0% 7/115 6.1% -24434546 -69795856 +3155 chr4 + 190214555 6098645 6098644 6098758 114 AAAGGAAAGGAAAGGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAA chr4 - 94230402 13634167 13634166 13634280 80596123 80596122 80596236 114 AAAAGAACAGTGGTGAAGAAAGAGATAAAAAGAAAGAGAGAGGGAAGGGCTCACTGGAGTAGAGATAGCACTAGGGAAAAAATTAGAAGTTGTGTGTGGAAAAAAATGAAGGAA ...:...x:.x::x...........x.:.........:...::...:.:xxx.xx.:.:x.:...x..x.xx.::......:xx....:xx.x:x.x:.:..::..x...:... 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% -7535522 -86694880 +3057 chr4 + 190214555 6098653 6098652 6098705 53 GGAAAGGAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237708 9237707 9237760 84992643 84992642 84992695 53 GGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ...:..:...:x..x.:...:.....:....:....:..:...:....::... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -3139055 -91091347 +3698 chr4 + 190214555 6098663 6098662 6098789 127 AAAGAGAGAGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAAGAAAGAAAGAAAGAAAGAT chr4 - 94230402 30258261 30258260 30258389 63972014 63972013 63972142 129 AAAGAGACAAAAATTGAATGAACAAAAGAGAGAAAGAGAAACATTGAGAACTGAATGTGAAGAATTAAATACAGGGTAAATAAAGAAGAGGAAAACAATGAGAAGGAAAAGGGTAAAAGTAATAAACAT .......x.:...--...x...x:.....:.......:.:.x.xx:....xx:..x:x::.:..xx...x.x..:.x.::x.:::.:..:.:...x..x.....:......::x:....x..x...x.. 13M2I114M 81/127 63.8% 129/94230402 0.0% 2/127 1.6% -24159598 -70070804 +3005 chr4 + 190214555 6098666 6098665 6098739 74 GAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAG chr4 - 94230402 472365 472364 472438 93757965 93757964 93758038 74 GAAAGAGAAGAAATTGCAAAAGGAGGAAGACAGAGGAATAAAGAAACGAAAGATGAAAAAGACAGCAAGGGAAG ..:......::..xx:x.:..:..:::.:.x.:..:..x.......x:..::.x........x..x...:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 5626301 NA +3297 chr4 + 190214555 6098679 6098678 6098762 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAGGAAGGAAGGAAGGAAAGAAAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx:..:.:.::..:....x:.:::x...:.......:.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -30759615 -63470787 +3044 chr4 + 190214555 6119541 6119540 6119574 34 TCTCAAAAACAAACAAACAACAACAACAACAAAA chr4 - 94230402 49190515 49190514 49190548 45039855 45039854 45039888 34 TCTTAAAAACAAACAAACAACAACAACAACAAAA ...:.............................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -43070974 -51159428 +3075 chr4 + 190214555 6119543 6119542 6119575 33 TCAAAAACAAACAAACAACAACAACAACAAAAA chr4 - 94230402 79949137 79949136 79949169 14281234 14281233 14281266 33 TCAAAAACAAACAAACAACAACAACAACAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -73829594 -20400808 +3026 chr4 + 190214555 6119545 6119544 6119578 34 AAAAACAAACAAACAACAACAACAACAAAAAAAA chr4 - 94230402 14290080 14290079 14290113 79940290 79940289 79940323 34 AAAAACAAACAAATAACAACAACAACAAAAAAAA .............:.................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -8170535 -86059867 +3143 chr4 + 190214555 6119545 6119544 6119580 36 AAAAACAAACAAACAACAACAACAACAAAAAAAAAC chr4 - 94230402 13051457 13051456 13051492 81178911 81178910 81178946 36 AAAAACAAACAAACAACAACAACAACAAAAAACAAC ................................x... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -6931912 -87298490 +3166 chr4 + 190214555 6119547 6119546 6119580 34 AAACAAACAAACAACAACAACAACAAAAAAAAAC chr4 - 94230402 18021899 18021898 18021932 76208471 76208470 76208504 34 AAACAAACAAACAACAACAACAACAAAAAAAAAC .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -11902352 -82328050 +3531 chr4 + 190214555 6138323 6138322 6138390 68 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCTTTCCAAGTAGCTGGGATTACAC chr4 - 94230402 18197126 18197125 18197193 76033210 76033209 76033277 68 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACAC ..:..:..:xx:x..:...........:.x...x.xx.x......:..:...........:.:..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -12058803 -82171599 +6030 chr4 + 190214555 6169877 6169876 6170306 430 AGTGCTCACAAGAGTGCCTACAATGCACTCTGTAATCTTTAAGTTTTTCTACCACCACCGATACTACCACTACC------ATCACTCTCATCACCACCACCACCACCACTACCACCACCACCACCACCACCACCACCACCCTCACCACCACCACATTCCCATCACCACCACCACCACCATCACCACTCTCATCACCATCATTACCACTCCACCACCACCGCCACGATCCCCATCATTACCAACATCATCACCATCACCACCACCACCACTTCCATCACCAACACCACCACCACCACCCTTCTCACCACCTCCATCACCATCACTACCACCATCATTGTCAAGACCATCATAATGCTCTCCACCATCACCACCACTCCC------CCCACCCTTCTCACCACCACCACCACCATCACCA---------CCACCATCACTGTCAACACCATCA chr4 - 94230402 2097512 2097511 2097929 92132474 92132473 92132891 418 AATGTCCACAAGACTGCC-----------------------AGCTTCCCCAACATCTCCAATGTCCCCAACACCCCTCAAAGCCCCCCCAATGTCTCCAGCGTTcccaacatcgccagcatccccaacatccccagcatccccaATACCACCATCTTCCT-----CAACATCCTAAATGTCCCCGAAGTCCCCAACACTGCTA--GCTTCCCAAATATCTCCAATGTCCCCAACATCCCCAGCATCTCCACTGTTCCCAATGTCCCCAATATTGCCAGCTTCCCCAGCATCCTCAACATCCCCAGAGTCCCCAGTACTGTCCGTTTCCCCAACATCCCCAATGTCCTCAACA---TCTCCAACATTGCCATCTTCCCCAACATTCCCAATGTCCTCAACATCCCCCGCGTCCCCAACAACCCTAAAGCCCCCAGCATTGCCAACATCCCCA .:..::.......x....-----------------------..:..::.:.x..:.x..:..:::x...x:...------.x.x.:.:..x:::.x...x.:::x...x:.:.:...x..:.x...x..:.x...x..:..:..x:.......:x....:-----..x..:.x:x.x::..x..:xxx..x:..x..::::..--:..:.x.x.x:.:.x...xx:......x...:x...:....x:...::.:x...x:::.x...x.x::::..x.xx.x...x..:.x:..x.x.:.:..xx::.:...x:..::..xx.x:.x...x...:x:...x::.x...xx.---......x...::...:.x::...------....x:x.:....x..:.x..xx.::.x:..x..---------..x...x..:..:.....:.x:.. 18M23D33M6I80M5D38M2D147M3D23M6I34M9I24M 231/397 58.2% 418/94230402 0.0% 54/397 13.6% 4072365 NA +3586 chr4 + 190214555 6203086 6203085 6203168 83 CTTGGC-TCAT----TGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCCCAC chr4 - 94230402 18197112 18197111 18197199 76033204 76033203 76033291 88 CTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......-....----.:..:..:xx:x..:.:...........x...x.xx.x........:............:.:....x.:x... 6M1I4M4I73M 63/83 75.9% 88/94230402 0.0% 5/83 6.0% -11994026 -82236376 +3411 chr4 + 190214555 6211662 6211661 6211747 86 TTTATATATAT---TTATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATTAT chr4 - 94230402 14964799 14964798 14964887 79265516 79265515 79265604 89 TTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT ........x.x---..:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............:.:. 11M3I75M 58/86 67.4% 89/94230402 0.0% 3/86 3.5% -8753137 -85477265 +3223 chr4 + 190214555 6211664 6211663 6211756 93 TATATATATTTATATATATATATATATATATATATATA-TATATATATATATATATATACACACACACACACACACACACATTATGTATATATT chr4 - 94230402 44197665 44197664 44197756 50032647 50032646 50032738 92 TATATATAGTGCTTGGGATATA-GTATA-GTATTTATACTACAGATATGTACACATACTAACATACAGACACACGCACACATTATTTATATGTT ........x.xx.xx:x.....-:....-:...x....-..:.x....:..:.:...:xx...:...x......:..........x.....:.. 22M1D5M1D9M1I55M 68/91 74.7% 92/94230402 0.0% 3/91 3.3% -37986001 -56244401 +3454 chr4 + 190214555 6211665 6211664 6211739 75 ATATATATTTATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:.x.:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -2184123 -92046279 +3784 chr4 + 190214555 6211667 6211666 6211744 78 ATATATTTATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.x...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x.....x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% -2184121 -92046281 +3847 chr4 + 190214555 6211669 6211668 6211743 75 ATATTTATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.x.:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x..... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% -2184119 -92046283 +3062 chr4 + 190214555 6211677 6211676 6211742 66 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -8753142 -85477260 +3095 chr4 + 190214555 6211686 6211685 6211736 51 TATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -81935494 -12294908 +3072 chr4 + 190214555 6211761 6211760 6211858 98 ATATATACACACACACACACACACACATATATATATGATTTGCTCTTTTAGATTTGATTTGCACTTTTGAGGTTTGTCTATTCTCTATCCCTTGCCCA chr4 - 94230402 50184264 50184263 50184360 44046043 44046042 44046139 97 ATATATATATTTTCACACACACACACATATATAAATGCTCTTTGTCCTTGCATATTATTACTGCATTCACTATTTACCTATCTTCTATTCA-TGCCCA .......:.:x:x....................x...x.:.x:x:::..:x..x.x...xx::.x..::xx:...::....::.....:.x-...... 91M1D6M 63/97 64.9% 97/94230402 0.0% 1/97 1.0% -43972503 -50257899 +3820 chr4 + 190214555 6258386 6258385 6258468 83 CTGCAGTCTCCTCCTCCCAGGTTCAAGCAATTCTCATGCCTCAGCCTCTCGAGTAGCTGGGACTACAAGCGTGTGCCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...:.:xxxx..:.::........::x...x..x.x........:..:.........:......--....::.....:.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -11938740 -82291662 +3043 chr4 + 190214555 6260781 6260780 6260841 61 GCTTTTTTTGTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGT chr4 - 94230402 76182410 76182409 76182470 18047933 18047932 18047993 61 GCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGT ...........xxxx..:xx........x............:...x.:..xx...:..... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -69921629 -24308773 +3010 chr4 + 190214555 6285306 6285305 6285395 90 AGGGAGGGGTACATCCAGGGAGGTGGCCTGTCAGGGAGGGTGGTGTCCAGGGAAAGCAGCATCAAGGGAGAGGGGTGTCCAGGGATGGGG chr4 - 94230402 81738315 81738314 81738404 12491999 12491998 12492088 90 AGGCAGTGATTGGTTCAGTGATGGGGACAGTTAGTGATGGGCATGCCCAGTGATAGGGATGTTCAGTGATAGGGGTGTCCAGTGATGGGG ...x..x.:.xx:.:...x..x.x..x.x..:..x..x..xx:..:....x..x..x::::.:x..x..x............x....... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% -75453009 -18777393 +3100 chr4 + 190214555 6299940 6299939 6299993 54 GTGTGTAGGGGTGGGTTGCGTGTGTGTGTGTGCACGTGTGTGTACGGGCAGAAG chr4 - 94230402 18369059 18369058 18369112 75861291 75861290 75861344 54 GTGTGCATGGGTGGGATGCATGTATGTGTGTGTACGTGTCCTTCTGGACAAAAG .....:.x.......x...:...:........:......x:x.x:..:..:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -12069119 -82161283 +3400 chr4 + 190214555 6312259 6312258 6312332 74 CTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTACCTCGGCCTTCCAAGTAGCTGGGATTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:.........:.x...x.xx:x...:.....:...........:.:....x.::... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -11884867 -82345535 +3062 chr4 + 190214555 6336748 6336747 6336806 59 CCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCAT chr4 - 94230402 69357097 69357096 69357155 24873248 24873247 24873306 59 CCTCCCTCTTTTCCCCGCTCCTTTCCTCCCCCCCCTTGTCACTCCCCCTTACTTTCCAT ........:..:..:.x....:.:.....::...:::x..x.....:.::x.:...... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% -63020349 -31210053 +3208 chr4 + 190214555 6337091 6337090 6337168 78 TTTGTTTCTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATTTGTAGT chr4 - 94230402 19559288 19559287 19559352 74671051 74671050 74671115 65 TTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-------------ATTTTTGTATATTCTtgtggt ...x...:...:..........................:.xx..-------------..x.x.:.....x:....:.. 44M13D21M 53/65 81.5% 65/94230402 0.0% 13/65 20.0% -13222197 -81008205 +3021 chr4 + 190214555 6407387 6407386 6407443 57 AACTGGTTTTTTTGTTTGTTTGTTTTTCAGATGGAGTCTCACTCTGCTGCCCAGGCT chr4 - 94230402 68183305 68183304 68183361 26047042 26047041 26047098 57 AACTGGTGTTTTTGTTTGTTTGTTTTTTAAATAAACACTCATTTATCTGTTTAAGCT .......x...................:.:..::.xx....:.:xx...:::.:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -61775918 -32454484 +3644 chr4 + 190214555 6423279 6423278 6423352 74 CTGCAACCTCTGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:..:......::x...x.xx.x........::...........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -11773847 -82456555 +3976 chr4 + 190214555 6457447 6457446 6457646 200 CTGCAGCCTCAACCTCCTGGGTTCAAGTGATCCTCCAGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTACATGCC-----ACCATCCTTGGCTAATTTTTTTTTATTTTTTGAAGAGACAGGGTCTCA--CTATATTGCCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGTGCTTGGAT chr4 - 94230402 18197126 18197125 18197320 76033083 76033082 76033277 195 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCCTT---TCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCCT--TCTGCCCTC---CTCTT----TCAGTCTACTTCCTCAAATCAGGTTCCCAATGTCCTCAAAT ..:.....:x..x..:.............x.:.x.x:.x........::::.........:...:..x..:..:xx.-----.:.......---.x..xx:x..x:..x:...xxx:.:x....x:.::.--..x..:....:--x...x:...---...:.----...:x.x.::::.:..xx....x:......x..x..:::.. 77M5I9M3D36M2I11M2D9M3D5M4D41M 122/188 64.9% 195/94230402 0.0% 19/188 10.1% -11739679 -82490723 +3534 chr4 + 190214555 6490825 6490824 6490926 102 AAGCAGGATTTCACTCCACTTCCACACACCCT------GTGGGTAGGGACTCTTAGTGTCTCCCTTTCACAGATGGGAAAACTGAGGCTTAAAGAGGTTAAGCAACCT chr4 - 94230402 10729148 10729147 10729252 83501151 83501150 83501255 105 AAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAG---CTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTT ..:.....x..x.:.:x:.:..xxx.:....:------..:....:xx...x.:..---....x...:....:...............x:.x.x........:..::. 32M6I18M3D49M 70/99 70.7% 105/94230402 0.0% 9/99 9.1% -4238323 -89992079 +3044 chr4 + 190214555 6518921 6518920 6518976 56 TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAGAAAAGAAAAGAGAAAAA chr4 - 94230402 13722713 13722712 13722768 80507635 80507634 80507690 56 TTGGGGGAAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAA ..:::::........:.x..............:......x.....::.::x.:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -7203792 -87026610 +3049 chr4 + 190214555 6537639 6537638 6537697 59 CTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGAACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::......x::xx...x.xx.x.........:.:................x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -11659500 -82570902 +3043 chr4 + 190214555 6552510 6552509 6552557 48 CTTTCTCCCTCTCTTCTCTTCTCCCTCTCTTCCTCTTTCTCTCCTCTG chr4 - 94230402 409581 409580 409628 93820775 93820774 93820822 48 CTTTTTACTTCTATTCTCTTTCTTCTCTCACCCTCTTTCTCTCCTCTG ....:.x.:...x.......::::.....x:................. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 6142929 NA +3485 chr4 + 190214555 6554845 6554844 6555008 164 GTGAGACTCCATCTCAAAAAAAAAAAAAAGAAAAAGAAAAAGA-----AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAGAAGAGAAGAGAAGAGAAAAGAAAA chr4 - 94230402 56098373 56098372 56098541 38131862 38131861 38132030 169 GTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAA ...x....x...x:x:.:.::x:.::x::.x...::.:....:-----.::.xx..:.::...xx:.:.::.xx..:.xxx.::x..:.:.:.x...:..xx.:....x.:...::...:....:..:..x....::.:::.:.:...xx.......xxx.....:... 43M5I121M 92/164 56.1% 169/94230402 0.0% 5/164 3.0% -49543528 -44686874 +3106 chr4 + 190214555 6554861 6554860 6554917 57 AAAAAAAAAAAAAGAAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 7711349 7711348 7711405 86518998 86518997 86519054 57 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ....:x.:...........:.........::.xx...:x...::...:...:.:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -1156488 -93073914 +3011 chr4 + 190214555 6554924 6554923 6554995 72 AAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAGAAGAGAAGAGA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA ..:..x:..x....::..x:.x...:..x::..:x::...::::.:..............x....:....:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -18512061 -75718341 +3477 chr4 + 190214555 6554959 6554958 6555028 70 GAAAGAAAGAGAAAGAAAGAAAAGAGAAGAGAAGAGAAGAGAAAAGAAAAGAAAAAGAAATTGCTCACAA chr4 - 94230402 25781763 25781762 25781832 68448571 68448570 68448640 70 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAATTTAAATTAATAGAAGATGGTCACAA ........:..............:::..:.x.:.:..:......xxx...xx..x....:x..x...... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -19226804 -75003598 +4331 chr4 + 190214555 6569627 6569626 6569889 263 AAGAGTAAAACTCCAAAAAAAAGAA-AGAAGAAAGAGAGAAAGAGAGGA---AAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGA------AAGAAAGAAAGAAAGAAAGAAAGAAAG-------------AAAGGAAGAGAGA-----------GAGAGAGAAAGAAAGAAAGAAAGA------------------------GAG------------------AGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAGATGG chr4 - 94230402 86597713 86597712 86598051 7632352 7632351 7632690 339 AAGAGCAGAGCATGAAAAGAAAGAGCAGAGGGGGGTCAGTAAGACAGAATGTATGTGACATAGAAAGAATTAGATACAGAAGGAAGGGCACACATATCACAAGAAGTGAAGTAAGAGAAATGAGAAACTATCTCTGGGGTAGAGGAAAGGAGACTTATATGGTCAAGAGACAATGAAGAAAAGAAAAATGATTGAGCAAAAATGAATTAGTAGAGTAGAAGTTTTACTTCTGCAGAAAAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATGAAAGGGATATAAAATGG .....:.:.:.x:x....:.....:-...:.:::.xx..x....x..:.---.x.x:.x.x........xx...x.x...::..::.:x.x.x.------.....:x:...x....:.:.x:::..:-------------.:.....::....-----------:.....x..x...::.......:.------------------------...------------------...:........:x.:......:x:.......::....x..::x::xx::x.:..:...x:...x..x.....x.:.....:...x:x:.::::.:x.x:.:.... 25M1I23M3I42M6I27M13I13M11I24M24I3M18I106M 167/263 63.5% 339/94230402 0.0% 76/263 28.9% -80028086 -14202316 +3300 chr4 + 190214555 6569671 6569670 6569770 100 AGGAAAGAAAG-------AAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGG-AAGAGAGAGAGAGAGAAAGAAA chr4 - 94230402 9237676 9237675 9237783 84992620 84992619 84992727 108 AGGAACAAAAGCTCAGCTGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAA .....x:....-------:.:.::.x.x..x.:......:..:x..x.:...:.....:....:....:..:...:....::..:-xx.x.xx...x:.:........ 11M7I67M1I22M 68/100 68.0% 108/94230402 0.0% 8/100 8.0% -2668005 -91562397 +3897 chr4 + 190214555 6569674 6569673 6569795 122 AAAGAAAGAAAGAAAGAAAGAGAGAGAGAGA--GAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAG chr4 - 94230402 30533170 30533169 30533286 63697117 63697116 63697233 117 AAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG-------GAGAGGAATAAAG ....:..........::.:.:......:...--.x..:.:..x:..:.xxx:.:.x.....xx....x.:.::..x..:..:.:.:.....:..x:xx:.....-------.....:..x.... 31M2I71M7D13M 78/115 67.8% 117/94230402 0.0% 9/115 7.8% -23963496 -70266906 +3260 chr4 + 190214555 6569715 6569714 6569815 101 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x.:x...:.:.::x..:....x:xx..x....xx.:x::..:.x.x.....:x..x..:..:...x:::.....:..:.::. 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% -54764986 -39465416 +3975 chr4 + 190214555 6569726 6569725 6569846 121 AGAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAA--AAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:.x.:....:..........:..:.:......:...xx:x....:.:x:..:.xxx:...x.....xx...--.::.:..x:.....::..:..:.:..x:xx....:.:...:::.x.... 72M2I49M 77/121 63.6% 123/94230402 0.0% 2/121 1.7% -23963438 -70266964 +3244 chr4 + 190214555 6569727 6569726 6569819 93 GAAAGAAAGAAAGAAAGAAAGGAAGAGAGAGA----GAGA----GAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x..x.....:..:----....----..x....xx.:x::..:.x.x......x..x..:...:..x..:.:...:..:.::. 32M4I4M4I57M 66/93 71.0% 101/94230402 0.0% 8/93 8.6% -54764974 -39465428 +3893 chr4 + 190214555 6569731 6569730 6569856 126 GAAAGAAAGAAAGAAAGGAAGAGA---GAGAGAGAGA-AAGAAAGAAAGAAAGAGAGAGAGA------AAGAAAGAAAAGAAA---AGAAGGAA---GGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGA chr4 - 94230402 90814947 90814946 90815088 3415315 3415314 3415456 142 GAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGA ..:...:...:..:x:...x.:.x---.:........-..:.:...:.x.....:....::.------.....:...x..:..---.:x.....---.:......x::::xx.....x...:......x.:.......::.. 24M3I10M1I24M6I15M3I8M3I45M 90/126 71.4% 142/94230402 0.0% 16/126 12.7% -84245216 -9985186 +3371 chr4 + 190214555 6569748 6569747 6569869 122 GAAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGA----AGAAAGAAAAAGAAAGGAGGGAGGGAGGGAGGGAA chr4 - 94230402 4547797 4547796 4547922 89682481 89682480 89682606 126 GAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAA ..:::.x.:...x:::..x.xx...x.x.:.:.:x......x....x:..:.....x:::.xxxx...........:..:.:.....----.:.:x::...x:....:..xx..:...:x.:.... 87M4I35M 75/122 61.5% 126/94230402 0.0% 4/122 3.3% 2021951 NA +3308 chr4 + 190214555 6569777 6569776 6569893 117 AAGAGAGAGAGAAAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGA-AGGAGATGGAAGG chr4 - 94230402 55334390 55334389 55334505 38895898 38895897 38896013 116 AGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAA--GTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAG .::...x:..x..:..:x:.xx....:..:...:..:.--.x..x.x:x...........:....x.x........:::.:::.:x.:..x.x.:::.:..:..-...x....x..:. 38M2D64M1I13M 73/115 63.5% 116/94230402 0.0% 3/115 2.6% -48764613 -45465789 +3124 chr4 + 190214555 6569827 6569826 6569874 48 AGGAAGGAAGAAAGAAAAAGAAAGGAGGGAGGGAGGGAGGGAAGGAAG chr4 - 94230402 15054347 15054346 15054394 79176009 79176008 79176056 48 AGGAAAGAAAAAAGAAAAAAAAAAGGGGGGGGGGGGGAAGCAATGAAG .....:...:.........:...:.:...:...:....:.x..x.... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -8484520 -85745882 +3031 chr4 + 190214555 6569931 6569930 6570023 93 AAGAAAGCGAAAGAAAGGAAGGAAGGAGATGGAGGAAGGAAGGGAGGAAGAAAAGAGAGAGAGGAAGGAAGGAGAAAGAGAGACGAAAGAAAG chr4 - 94230402 29101562 29101561 29101654 65128749 65128748 65128841 93 AAGAAAATGTGAAATTCTAAGGAGAAAGACAAAGATTAGAAGGAAAGAAGGACTGTGGGACAGAAGGGTAAGAGAAAGAGGAAAGCAAGAGAG ......::.x:.:.xxxx.....:::...:::..:xx:.....:.:....:.xx.x.:..x..:.:..x.:.........::.x.x....:.. 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% -22531631 -71698771 +3079 chr4 + 190214555 6587706 6587705 6587778 73 TTTGTTTTT--TGTTTTTTGGGTTTTTTGGGGTCTTTTGGGTTGTTGTTTTTTTTTTTTTTTTTTTTTTGAGACA chr4 - 94230402 18073331 18073330 18073402 76157001 76157000 76157072 72 TTTGTTCCCACTGTTCCTT---TTTGTTGTAGTTTTTGGGGTTGATGGTTTTTTTTTTGTTTTTTTTTTAACACA ......:::--....::..---...x...x:..:...x......x..x..........x..........:.x... 9M2I8M3D53M 55/70 78.6% 72/94230402 0.0% 5/70 7.1% -11485625 -82744777 +3280 chr4 + 190214555 6587843 6587842 6587911 69 CTCCCGGGTTCAAGCGATTATTGTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGAGTGCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.:.........:.x..xx::x.x........:............:.:....x...-----...... 58M5D6M 50/64 78.1% 64/94230402 0.0% 5/64 7.8% -11609296 -82621106 +3479 chr4 + 190214555 6589591 6589590 6589684 94 TTCAGCCTC-------CCCAGCAGAGTGGGTGGG-GTTATCAACCCCATTTTACAGATGTGGAAACTGAGGTTCAGAGAGGGTAAGTGACCAGATCAGGGTC chr4 - 94230402 10729161 10729160 10729262 83501141 83501140 83501242 102 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:......-------...x.::::..:...::x-::.....:.:...........:..x.:.........:x..x.x...x.....:.::x.x:...:... 9M7I18M1I67M 65/94 69.1% 102/94230402 0.0% 8/94 8.5% -4139570 -90090832 +3382 chr4 + 190214555 6613680 6613679 6613744 65 GGAAGGAGGGAAGGAAGGAAGGAAGTGAGGGAGGGAGGGGAAGGGAAGGGAACGGAAGGGAGGGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ..:::..........::...:::.:x..:...x...x......::......:...::.x.:.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -62453005 -31777397 +3118 chr4 + 190214555 6613758 6613757 6613849 92 GAAAAGAAGAGAGGGAGGGAAGGAAGGAAAGAAGGAAGAAAGGAAGAGGGAGGAGGAAGGAAGGAAGGAAGGAAAAAAGAGGGAGGGAGGAA chr4 - 94230402 16587074 16587073 16587165 77643238 77643237 77643329 92 GAAAAGATGAAGAGGCAGGACTGAAGAGCAGTAAGAAAATAGGAAGAGGGAGGACTGAATGGTAAAGGTAAGCAAAAGAAAATAGGGGAAAA .......x..:::..x:...xx....::x..x.:...:.x..............xx:.:x::x:....x.:.x....::.::x....:::.. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% -9973316 -84257086 +3113 chr4 + 190214555 6613785 6613784 6613854 70 AAAGAAGGAAGA-AAGGAAGAGGGAGGAGGAAGG--AAGGAAGGAAGGAAAAAAGAGGGAGGGAGGAAGAAGG chr4 - 94230402 10584953 10584952 10585025 83645378 83645377 83645450 73 AGAGGAGTAGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGAGTAGG .:..:..x.:..-....:.:xx....x.....:.--......:.::.......x..:.........:..x... 12M1I21M2I37M 53/70 75.7% 73/94230402 0.0% 3/70 4.3% -3971168 -90259234 +3147 chr4 + 190214555 6613793 6613792 6613852 60 AAGAAAGGAAGAGGGAGGAGGAAGGAAGGAAGGAAGGAAAAAAGAGGGAGGGAGGAAGAA chr4 - 94230402 37794331 37794330 37794390 56436013 56436012 56436072 60 AAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAA ..:...::..:.:..:..:..:x..:x..::..:..:......:....:...:....:.. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% -31180538 -63049864 +3182 chr4 + 190214555 6624223 6624222 6624269 47 TGGCCTGTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 75733741 75733740 75733787 18496616 18496615 18496662 47 TGGGTTTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTTT ...x:.x....................x.......xx.......... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% -69109518 -25120884 +3074 chr4 + 190214555 6624229 6624228 6624265 37 GTTTTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTT chr4 - 94230402 51354299 51354298 51354335 42876068 42876067 42876104 37 GTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTT ....................x......:......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -44730070 -49500332 +3015 chr4 + 190214555 6624234 6624233 6624271 38 TTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 3484479 3484478 3484516 90745887 90745886 90745924 38 TTGTTGCTGTTGTTTGTCTTTTTTTTTTTTTTCTTTCT ......:..........:..............:...:. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 3139755 NA +3001 chr4 + 190214555 6628804 6628803 6628877 74 AAAAAAAAAAAAGAAAAGAAAGAAGAGAAGCAAAGGGAGGGAAGGAGCAGGGAGGGGCTGAGAAGGGAGGGGAA chr4 - 94230402 40472546 40472545 40472619 53757784 53757783 53757857 74 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ........:...:...:....:..:..:..x:::...:...::...x:x::....x.xx:.::.x...:.:... 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% -33843742 -60386660 +3364 chr4 + 190214555 6648612 6648611 6648690 79 CTGCAGCCTTAACCACCCAGGCTCAAGCGATCCTCCTGCCTCAGCCTCTCCAGTAGCTGGGACCACAGGCATGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:x..x.x:.::..:.....:.x.:.x.xx.x........:..x.........:..:...--.:..:..... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -11548514 -82681888 +3209 chr4 + 190214555 6652301 6652300 6652355 55 GCTGGTGACACAGCAAGACTCAAAAAAAAAAAAAAAAAAAAAAAACCACCACCAA chr4 - 94230402 2334591 2334590 2334645 91895758 91895757 91895812 55 GCTGTTGACACAGAACTTGTTAAAAAAAAAAAAAAAAAGACAAAACCACCACAAA ....x........x.xxxx.:.................:.x...........x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 4317710 NA +3043 chr4 + 190214555 6652322 6652321 6652364 43 AAAAAAAAAAAAAAAAAAAAAAAACCACCACCAACAACAAAAA chr4 - 94230402 19094151 19094150 19094193 75136210 75136209 75136252 43 AAAAGAAAAACAAAACAAAAAACACCACCACCACCAACAAAAA ....:.....x....x......x..........x......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -12441829 -81788573 +3265 chr4 + 190214555 6652325 6652324 6652368 44 AAAAAAAAAAAAAAAAAAAAACCACCACCAACAACAAAAACAGT chr4 - 94230402 33213046 33213045 33213089 61017314 61017313 61017357 44 AAAAAAACAAAAAAAAACCAACCACCACCAACAACAAAAAAAGT .......x.........xx.....................x... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% -26560721 -67669681 +3200 chr4 + 190214555 6653452 6653451 6653523 72 CTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTATAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::........:.x...x.xx.x........::.............:..:.x.::. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -11543674 -82686728 +3151 chr4 + 190214555 6672295 6672294 6672373 79 CGGTCTCGACCTGCTGGGCTCAAGCAATCTTCCCGGCTCAGCCTCTCAAGTAGCTGGGACTATCGGCACGCGCCACCAC chr4 - 94230402 18197129 18197128 18197202 76033201 76033200 76033274 74 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA----CACGTG-CACCAC .:.:.:x:.x..x.....:.....::x.::x.xx..........:............:....----....:.-...... 62M4D6M1D6M 55/74 74.3% 74/94230402 0.0% 5/74 6.8% -11524834 -82705568 +3148 chr4 + 190214555 6678036 6678035 6678077 42 ATGGGGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTTGAGAC chr4 - 94230402 55414265 55414264 55414306 38816097 38816096 38816138 42 ATGGGGTTTTTTTTGTTTGTTTTGTTTTTTTAATTTTAAGAC ............................x..xx....:.... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -48736229 -45494173 +3116 chr4 + 190214555 6692122 6692121 6692167 46 TATACATATATGTGTATATATGTGTATATATATGTGTGTGTGTGTG chr4 - 94230402 19704281 19704280 19704326 74526077 74526076 74526122 46 TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..:.:.....:..:.....x.......:.x:............... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -13012159 -81218243 +3216 chr4 + 190214555 6692123 6692122 6692169 47 ATACATATATGTGTATATATGTGTATATATATGTGTGTGTGTGTGTG chr4 - 94230402 19704280 19704279 19704326 74526077 74526076 74526123 47 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..........::........x...:...:.x::.............. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -13012157 -81218245 +3205 chr4 + 190214555 6699940 6699939 6699989 50 GTAGGGTTTGTTGTTGTTGTTGTTTTTTGTTTTTTGTTTTTTTGAGACAG chr4 - 94230402 4919478 4919477 4919527 89310876 89310875 89310925 50 GTAGGTTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTTATGTGACAG .....x...x.................xx..x.........x..x..... 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 1780462 NA +3126 chr4 + 190214555 6699946 6699945 6699980 35 TTTGTTGTTGTTGTTGTTTTTTGTTTTTTGTTTTT chr4 - 94230402 66916771 66916770 66916805 27313598 27313597 27313632 35 TTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTT ....................:.............. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -60216825 -34013577 +3070 chr4 + 190214555 6706637 6706636 6706716 80 TCACTTCCCATCTCTACTTCTGCACCTGCCCCTATCTTCTAGCCCACACTCAAACTCACATTAATCCATACCCAGTCTTG chr4 - 94230402 59793058 59793057 59793135 34437268 34437267 34437345 78 TCTCTTTCC--TTCTGTTTCTGTATCTGCCCCTCTCTTCTAGCTGGCATGCATGTTCACACCGGTGCACGCACAATTTTG ..x...:..--:...::.....:.:........x.........:x:..:x..x::.....::::.x..::.x..:.:... 9M2D69M 52/78 66.7% 78/94230402 0.0% 2/78 2.6% -53086421 -41143981 +4597 chr4 + 190214555 6727593 6727592 6727899 307 GGCCTCCTCCTCGTTCCCCCACTCCCCTCCTCCCCTTCCCCCTCCTCCTCCCCCTCCTTCTCCTCCCCTCCCCCTCCTCCCCCTCTCCTGTCCTCCTCCCCTTCCTT--------CCCCCACCCATCCTCCCCCTCCCCTCCCCTTCCTCCCCG----------TCCACCTCCCCTGCCCCTCCTCCCCATCTCCTGTCCCTCCTCCCCCTCCTGTCCCCTTCCTTCCCCCTCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCCCTCCCCCTCTCCTCCTTGCC chr4 - 94230402 9816754 9816753 9817070 84413333 84413332 84413649 317 GGTCATCTCCCACTTCTCAAATGCCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTCCTCCCTCTTGATGACAGCCCTCTGTCACTCACTCTTTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACC----CACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTC----ACCCTCCTCCTCATCGCCTTTCC ..:.x:....:xx...:.xx.:x...x.:...x:x:::.x...:.:::.:.:.:x.:..:x:...:x:....:x:x...xx:x:..x:.x..:x.....:.:::...--------...:.xx:..::.x.:.::.:x:.x.x.:..:x...:.x----------...x.:..x...x:::x.:..:..x:x:...x:x.....:..::..x.x.x:.x......x::.x.x::.:...x.x...xx.......----.x....x.::.::x.:.....x...:.x.x.....x:::..----x......:....x:.x....x.. 107M8I39M10I89M4D41M4D23M 167/299 55.9% 317/94230402 0.0% 26/299 8.7% -3089161 -91141241 +5014 chr4 + 190214555 6727599 6727598 6727906 308 CTCCTCGT------TCCCCCACTCCCCTCCTCCCCTTCCCCCTCCTCCTCCCCCTCCTTCTCCTCCCCTCCCCCTCCTCCCCCTCTCCTGTCCTCCTCCCCTTCCTTCCCCCACCCATCCTCCCCCTCCCCTCCCCTTCCTCCCCGTCCACCTCCCCTGCCCCTCCTCCCCATCTCCTGTCCCTC---------CTCCCCCTCCTGTCCCCTTCCTTCCCCCTCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCCCTCCCCCTCTCCTCCTTGCCTAAGCTT chr4 - 94230402 9816745 9816744 9817045 84413358 84413357 84413658 301 ctcctCGTGGGTCATCTCCCACTTCTCAAATGCCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGT---------------------GCCTGTTCTCTGCCTCCTC-CCTCTTGATGACAGCCCTCTGTCACTCACTCTTTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTT ........------..:......:.:.xxx.x...x.:.:.x.x.::.x..::.:::.....:x.:::.x:.:..x:....:x:x::.x..---------------------:..::.:...:x.....:.-..:...xx.xx.x.:..x.:x:.x..xx.:..::.x:.xxx..::.....:::---------:.....:..x:x..:::x.:.....xxx.:..xxx.....:..::....x:..:x..:...x.:.x...:.:...x.x...xx........x.::.x:.:.::..:.....x...:.x:...:.x::.. 8M6I77M21D19M1D53M9I129M 164/286 57.3% 301/94230402 0.0% 37/286 12.9% -3089146 -91141256 +3516 chr4 + 190214555 6727710 6727709 6727889 180 TCCTCCCCCTCC------CCTCCCCTTCCTCCCCGTCCACCTCCCCTGCCCCTCCTCCCCATCTCCTGTCCCTCCTCCCCCTCCTGTCCCCTTCCTTCCCCCTCCCCTCCCCTCCTCCCCCACCCCCTCCCCTCCTCCCCCACCCCCT-----------------CCCCTCCTCCCCCACCCCCTCCCCTCCCCTCCCCCTCT chr4 - 94230402 26928842 26928841 26929030 67301373 67301372 67301561 189 TTCTCCCGCTTCTCGCATCCGCACCTCTGCCCTCGCTTCCTTCACCCGCTCCCTTCCCCCATCCTTTGTTTTTCA-CCACCTCGGATCTCC-------------CCTTCCCCATCTCGCCCCCCCCCGGCCCATTCCCCCGATTCCCTCGACGGGACGCGCACGGCCCCAATCGCCCCATCCCCGTCCCCGCGCGCCCCGTCT .:.....x..:.------..x.x...::x:..:..:::x.:..x..:..:..::::.......:::...:::..x-..x....xx:..:..-------------..:.....x:...x...x.....xx...x:::....x.::....-----------------....xx::x.....:....x:...:x.x.x....x... 12M6I57M1D15M13D44M17I38M 105/166 63.3% 189/94230402 0.0% 37/166 22.3% -20201132 -74029270 +3273 chr4 + 190214555 6743442 6743441 6743574 133 TCTTGCTAGAATTATTCTTCTTCCCCTTC--------CCCTTCCTCTCCTTCTCCTTCTCCTCTTCCT---CCTCTCCTCCTCCCCCTCCCCCTT---------CTTCTTTTTCTTCCTCCTCCTCCTCCTCCTCTTTCTTCTTCTTTGTCCT chr4 - 94230402 83016316 83016315 83016468 11213935 11213934 11214087 153 TCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTCAGCCACCAGCCCCATCTGCTGCCCCAGCCTTGTGCT ....x..x.:::.x.x....x::.:..x.--------:.::.......:....x..::........:.---......x...x..:.:....x...---------..:.:...::...xx..x..xx.:..x:..x:.x.::.xx.:....x.. 29M8I31M3I24M9I49M 87/133 65.4% 153/94230402 0.0% 20/133 15.0% -76272874 -17957528 +3490 chr4 + 190214555 6743467 6743466 6743551 85 CTTCCCCTTCCTCTCCTTCTCCTTCTCCTCTTCCTCCTCTCCTCCTCCCCCTCCCCCTTCTTCTTTTTCTTCCTCCTCCTCCTCC chr4 - 94230402 28727283 28727282 28727362 65503041 65503040 65503120 80 CTCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCT-----TCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTCC ..:...:.x..:..:...x:.:..:...:x.x.:.x:...-----......x:..x...:x.............::.:....... 40M5D40M 57/80 71.2% 80/94230402 0.0% 5/80 6.2% -21983816 -72246586 +3061 chr4 + 190214555 6743494 6743493 6743593 100 CTCTTCCTCCTCTCCTCCTCCCCCTCCCCCTTCTTCTTTTTCTTCCTCCTCCTCCTCCTCCTCTTTCTTCTTCTTTGTCCTCCTCCTCCTCCTCTTCTCC chr4 - 94230402 18501286 18501285 18501385 75729018 75729017 75729117 100 CCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCCAGTTCACTACTCC .:...:x:.:.::.x...:.....:......:...:......::..:::.x....x:..x.xx.....:::.x::xxx:...:.:.:xx.:.x..x.... 100M 59/100 59.0% 100/94230402 0.0% 0/100 0.0% -11757792 -82472610 +3187 chr4 + 190214555 6759423 6759422 6759487 65 GTAATATGATTCATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735339 92735338 92735403 1495000 1494999 1495064 65 GTAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....:x.xx.x.....x.....:...:..:.:......x.x......:.x.........:.x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -85975916 -8254486 +3032 chr4 + 190214555 6759431 6759430 6759481 51 ATTCATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::....:...:..:.:..........x....:.x.........:.x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -85975922 -8254480 +3053 chr4 + 190214555 6759435 6759434 6759485 51 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200277 4200276 4200327 90030076 90030075 90030126 51 ATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ............:.:.:..............::...:xxx.......x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 2559158 NA +3071 chr4 + 190214555 6759435 6759434 6759485 51 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.....:...:..:.:........x......:.x.........:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -85975918 -8254484 +3406 chr4 + 190214555 6759436 6759435 6759489 54 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735356 92735355 92735409 1494994 1494993 1495047 54 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .....:...:..:.:...............:.x.........:.x...:::... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -85975920 -8254482 +3673 chr4 + 190214555 6787173 6787172 6787285 113 CTCTCAAAAAAAAAAAAAAAAAAAAAAAATCCTTATATTTGAAGTATAATTTAATTCCCAAGAGATTACATGCTTTTTCTTTAAAAGTTTTCTTTTTTAGAAATTTATTATAT chr4 - 94230402 72310658 72310657 72310755 21919648 21919647 21919745 98 CTCTCAAAAAAAAAAAAAAAGAAAAAGGATACTTATATTTCAACCTC--TTTA-------------TACAGGCTTTTTGTTGAGAATGTTTTTTTTCCCTCAACTTTTCATAT ....................:.....::..x.........x..x:x:--....-------------....x.......x..x.:..xx...:....::xxx..:..x.:.... 47M2D4M13D47M 74/98 75.5% 98/94230402 0.0% 15/98 15.3% -65523485 -28706917 +3649 chr4 + 190214555 6796317 6796316 6796398 82 CTGCAGCCTCTGCCTCCTGGGTTCAAGCGATTCTTATGTCTCAGCCTCCCAAGTCACTGGGACTACAGGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.....:xx:x..:...........:.x...x:.x.x........::.....x:....:......x...-----...... 71M5D6M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% -11400809 -82829593 +3123 chr4 + 190214555 6799665 6799664 6799712 48 TTGCTTTGAGATTAGTTGGGTTTTTTTGTTTTTTGTTTGTTTGTTTTT chr4 - 94230402 67214692 67214691 67214739 27015664 27015663 27015711 48 TTTCCTTAAAATCTGTTGGGTTTTTTTTTTGTTTGTTTGTTTGTTTTT ..x.:..:.:..:x.............x..x................. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -60415027 -33815375 +3187 chr4 + 190214555 6799988 6799987 6800068 81 TTGCTGGCTTTTGTTTTGCATATACTCTGTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 45185586 45185585 45185666 49044737 49044736 49044817 81 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTT .....x::...:x:.:.x.x..xx...x.......x:...x..........::..::x.....:x::...:..:...:... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -38385598 -55844804 +3558 chr4 + 190214555 6821576 6821575 6821684 109 GTAGTCCATGGTGTATATATATACACACATATATACACATATCTATATATATATACGTGTATATAGATACGTGTATATACGTGTATGTGTATAC--------ATATATACATGTATA chr4 - 94230402 73121093 73121092 73121209 21109194 21109193 21109310 117 GTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:..:xxx...:..::....x..:...:.........x.xx:..:x:..:......:..x:..x.::x..:...:.:x..::..:.:x....--------.x.:.:......... 94M8I15M 71/109 65.1% 117/94230402 0.0% 8/109 7.3% -66299517 -27930885 +3038 chr4 + 190214555 6821668 6821667 6821719 52 ACATATATACATGTATATATGTGTGTGTGTGTGTGTGTATATATATATATGT chr4 - 94230402 4406423 4406422 4406474 89823929 89823928 89823980 52 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGT .:.::....:..:xx....x....................x:.......x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 2415245 NA +3458 chr4 + 190214555 6821686 6821685 6821744 59 ATGTGTGTGTGTGTGTGTGTATATATATATATGTATATACATATACCACAATTTCTTTA chr4 - 94230402 89821281 89821280 89821336 4409067 4409066 4409122 56 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA---GCCTCAATCTCTTTA ..........x.x.......:...........:...:....---:..x....:...... 41M3D15M 48/56 85.7% 56/94230402 0.0% 3/56 5.4% -82999595 -11230807 +3480 chr4 + 190214555 6838264 6838263 6838346 83 CTGCAGCCTCCGCCTCCCAGGCTCAAGCAATTCTCCCACCTCAGCCTTCCAAGTAGCTGGGACTGCAGGTGGACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.....:xx:x..:.::..:.....::x...x.xx:x.........:...........:...:..x...--......::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -11358862 -82871540 +4332 chr4 + 190214555 6860232 6860231 6860321 90 CCTCACAA---CCCTGAGAGGTA----AATATTACTAGCTCTATTTTGTAGGTGAGGAAACTGAGCTATGGAGAGGTTAAGTAACATGCCTAAGGTC chr4 - 94230402 10729166 10729165 10729262 83501141 83501140 83501237 97 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ........---.....x......----.x..:..::.....:.....::.....:.:........x:.::x.x...........:x....:.::... 8M3I12M4I70M 69/90 76.7% 97/94230402 0.0% 7/90 7.8% -3868934 -90361468 +3364 chr4 + 190214555 6913071 6913070 6913153 83 CTGCAACCTTTGTCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGATTACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::........:.x...x.xx.x........:..x.........:.:....--.:..::....::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -11284055 -82946347 +3225 chr4 + 190214555 6921280 6921279 6921360 81 CTGCAGTCTTGACCTCCTGGGCGGGCTCAAGTGATCCTCCCACCTCAGCCTTTCAAGTAGCTAGGACCACAGACGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGT----TCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:...:.:x:.x..:.....:----.......x.:.x.xx:x...................:.:..:...x::.::.... 22M4D55M 54/77 70.1% 77/94230402 0.0% 4/77 5.2% -11275846 -82954556 +3122 chr4 + 190214555 6928726 6928725 6928804 79 AAGTAAGTACCGTGAGTTTTCATTTACATGTGAGGAAACTGAGGCAAGGGGTGGTTAAGTGGTTTGTCCAA-----GGATACAG chr4 - 94230402 10729188 10729187 10729271 83501132 83501131 83501215 84 AGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAG .:....x...::.x..:.::xx......x...:.:...........x:x:xx........::....:...:-----..:..... 71M5I8M 55/79 69.6% 84/94230402 0.0% 5/79 6.3% -3800462 -90429940 +3422 chr4 + 190214555 6933232 6933231 6933317 86 GAATTACCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTTCCCCTCCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCTT chr4 - 94230402 20485612 20485611 20485691 73744712 73744711 73744791 80 GACTTGCTTTCCACCCCTGCCCCACCCCCCCCCTT--TTCCCCTT----TTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTT ..x..:.:.:..x:...:x....x....:.....:--.......:----...:.:........:.....:.::..:..:..xx... 35M2D8M4D37M 58/80 72.5% 80/94230402 0.0% 6/80 7.5% -13552380 -80678022 +3112 chr4 + 190214555 6933239 6933238 6933318 80 CTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTTCCCCTCCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCTTT chr4 - 94230402 20485618 20485617 20485686 73744717 73744716 73744785 69 CTTTCCACCCCTGCCCCACCCCCCC-------CCTTTTCCCCTT----TTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT ..::..x.....x...:x...:...-------..::.:......----...:.:........:.....:.::..:..... 25M7D12M4D32M 52/69 75.4% 69/94230402 0.0% 11/69 15.9% -13552379 -80678023 +3689 chr4 + 190214555 6981100 6981099 6981182 83 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCACCCGAGTAGCTGGGATTACAGGCATGTACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.............x...x..x.x.......x::.:.........:.:....--.:..:.....:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -11216026 -83014376 +14729 chr4 + 190214555 6997009 6997008 6997240 232 CATGGATGTGAGGGCGATTTGGCTGTCATATCTGTCACTCCATTGATCACCAGGGTTGATTCGGCTCATCT-GCTGGCTAGCCCGGTGTCCCCTTCCCCACT-AGCACTCCATGTGCGTCCCTCCCGAAGCTGTGTGTTTGGTCAAAGAGAATGACCATCCCTGATAGAGG----ACCGGTCTTCAGTC-AGGGTATGTGAGTAGCTGCACTCCCCTGCTAGAGCCTCCAGACAGGCTC chr4 - 94230402 69279859 69279858 69280096 24950307 24950306 24950544 238 caaGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACG-GTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTC ..x...............:......:x.:.........:......................:....x....-.........x:x......:......:.x..-.x.:..........................:::.:......:.....:.:....x....:.......:----....x..x......-.......::.-........:.............:......:...:.... 71M1I30M1I68M4I14M1I10M1D38M 197/231 85.3% 238/94230402 0.0% 8/231 3.5% -62282850 -31947552 +3077 chr4 + 190214555 7011531 7011530 7011613 83 TCAGGGTTTTTTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTGGCAGGGTCTTGCTCTCTCACCCAGACTGGAGTGCAA chr4 - 94230402 12266167 12266166 12266249 81964154 81964153 81964236 83 TTAGGGTTTTTGTTGTTGTTGTTGTTTTGTTTGATTTTTTTTTAATGAGGAACACTTGTTCTGTCAGTCTCTCTACAGTACAA .:.........x.....x..x...........x:....x....xx..:x:::xx....:...x...x:.xxx..:x...:... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -5254636 -88975766 +3094 chr4 + 190214555 7026880 7026879 7026924 45 GAGGAAGACCCTGTCTTAAAAAAACAAACAAACAAACAAAAAAAA chr4 - 94230402 51829419 51829418 51829463 42400940 42400939 42400984 45 GATAAAGTCTCATTCTTAAAAAAACAAACAAACAAACAAAAAAAA ..x:...x.:.xx................................ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -44802539 -49427863 +3314 chr4 + 190214555 7036273 7036272 7036343 71 AGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAATTGAAATTCAATGTAAAATAAAATATGTACATATT chr4 - 94230402 47152891 47152890 47152960 47077443 47077442 47077512 70 AGAGGGACACACTACC-AAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATATT ....x..x..x..::.-x.................x:x.....x...x.:....x..x.......:..... 16M1D54M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% -40116618 -54113784 +3067 chr4 + 190214555 7039677 7039676 7039735 59 CTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.......x.:xx...x.xx.x........:..:.........:......x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -11157462 -83072940 +3831 chr4 + 190214555 7049154 7049153 7049232 79 CTGCAGCCTCCACCTCCTGGGCTCAAGCGATCCTCCTACCTCAGCCTCTCAAGTAGCTGGGACTACAGGCATGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:xx.x..:.....:.....:.x.:.x.xx:x........:............:......--.:..:..... 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -11147972 -83082430 +3105 chr4 + 190214555 7062476 7062475 7062529 54 AAAAAAAGGGATATTTATATATATATATATATATATATATCTTTTTTTTTGAGA chr4 - 94230402 8067959 8067958 8068012 86162391 86162390 86162444 54 AAGAAAAGGCATATTTATATGTATATATGCGTATATGTATGTTATTTATCAAGA ..:......x..........:.......:::.....:...x..x...x.::... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -1005483 -93224919 +3107 chr4 + 190214555 7079196 7079195 7079267 72 AGTTTTCTTTTTCTTTCTTTCTCTCTCTTTTTTTTTTTTTGGGAAGTTTTTAGTTTCATTTTGTAGTTTTCT chr4 - 94230402 36716824 36716823 36716895 57513508 57513507 57513579 72 AATTTTCACTTTTTCTTTTTCTTTCCTTTTTTCTGTATTTGGAAAGTATCCTCTTTCACATTTTGGTTTCCT .:.....x:...:.:.:.....:..::.....:.x.x.....:....x.::xx.....:x..x.:....:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -29637628 -64592774 +3152 chr4 + 190214555 7093525 7093524 7093617 93 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTCTTTCTTTTC chr4 - 94230402 79478396 79478395 79478488 14751915 14751914 14752007 93 TTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTC ..:::::...:.x...::...xx...:x:....x....:.x...::........::xx:::........::::.x....:x.x:...x..... 93M 57/93 61.3% 93/94230402 0.0% 0/93 0.0% -72384871 -21845531 +3183 chr4 + 190214555 7093578 7093577 7093634 57 TCCTTCTTTCCTTCTTTCCTTTCCTTCTTTCTTTCTTTTCTTTTCTTTTTTTGGGAT chr4 - 94230402 36600615 36600614 36600670 57629733 57629732 57629788 56 TCCTTTTTTCCT-CTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGGT .....:......-..:..:..:....::.....:......x..........xx..:. 12M1D44M 45/56 80.4% 56/94230402 0.0% 1/56 1.8% -29507037 -64723365 +3376 chr4 + 190214555 7093642 7093641 7093758 117 CATTCTGTCACCAGGCT---GGAGTGTAACGGCATGG--TCTTGGCTTACGGCAACCTCCATGCTCACAGGTTCAAGCGATTCTCTGGTCTCAGCCTCTCAAGTGGCTGGGATTACAGGCGC chr4 - 94230402 18197080 18197079 18197197 76033206 76033205 76033323 118 CATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGC----CCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ...x...xx.x......---..x::::.x.x..x...--..x..x::...:..----:.x.x...:x::........:.x...x.x..x........:......:.....:.:....x.:.. 17M3I17M2I14M4D65M 78/113 69.0% 118/94230402 0.0% 9/113 8.0% -11103438 -83126964 +3126 chr4 + 190214555 7124511 7124510 7124582 72 CTGCAACCTCCGCCTCCCGGTTTCAAGCGATCCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:..x......:.x.:.x.xx.x........::::...........:....x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -11072615 -83157787 +3709 chr4 + 190214555 7148059 7148058 7148157 99 ACTTAACC-CACAACACAACCCTGTAGGATTGCTG-TGACTTTGGGCCCCATTTCACAGGTGGGAAAACTGAGGCTCAGAAGGTTTAAGGGAATGGCCTAG chr4 - 94230402 10729160 10729159 10729258 83501145 83501144 83501243 99 ATTTAGCCTCACAATAC--CCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .:...:..-.....:..--......::.:.x.x.:-.x...x.x:..:......:....................x..x.x:.x.....x:.x.x...:.. 8M1I8M2D16M1I65M 72/97 74.2% 99/94230402 0.0% 4/97 4.1% -3581101 -90649301 +4305 chr4 + 190214555 7180620 7180619 7180718 99 CTCTCTCTCTCTTTTTATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACATACACATATATACACA chr4 - 94230402 88147163 88147162 88147258 6083145 6083144 6083240 96 CTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATATAGGGAGAAGCATATATCAACA ..:.:.:.:.:.....x..:..:..x:x..............:.x.:.:...:.:.............---..:.....x:x.x.x:.......xx... 68M3D28M 70/96 72.9% 96/94230402 0.0% 3/96 3.1% -80966543 -13263859 +4117 chr4 + 190214555 7180625 7180624 7180770 146 TCTCTCTTTTTATATATATATATATATATAT---ATATATATATATATATACACACACACACA--CACACACACATATATACATACACATATATACACATATATATACACACATATATGTATATACACACTATATATACACACATATATAC chr4 - 94230402 4417307 4417306 4417457 89812946 89812945 89813096 151 TCATTTTTCTTACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x:.:..:...:..::x.:.x:...x.x.:---.x..x..x.:...................--x...:..:...:x:x::x.:.....:...xx.x::..x..x.:.:...:....x...x..:.::.:.:.x.:..xx.......x.. 31M3I29M2I86M 94/146 64.4% 151/94230402 0.0% 5/146 3.4% 2763318 NA +3293 chr4 + 190214555 7180635 7180634 7180700 66 TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATA chr4 - 94230402 8395805 8395804 8395870 85834533 85834532 85834598 66 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x.:..:...x..:....:...::x..:..xx...:...............x.....x..:x... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -1215170 -93015232 +3525 chr4 + 190214555 7180635 7180634 7180702 68 TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACA chr4 - 94230402 24136194 24136193 24136261 70094142 70094141 70094209 68 TGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA .:.::........x...:x.xx.:.x......:.......:...x...x...x..........x.... 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% -16955559 -77274843 +3005 chr4 + 190214555 7180636 7180635 7180694 59 ATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 14964825 14964824 14964883 79265520 79265519 79265578 59 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ....:.x.:::.:.::.:.::.:...:......:.xx........::............ 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% -7784189 -86446213 +3387 chr4 + 190214555 7180636 7180635 7180697 62 ATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...x.:..:...x..:....:...::x..:..xx...................x.....x.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -1215168 -93015234 +4054 chr4 + 190214555 7180659 7180658 7180773 115 TATATATATATATACACACACACACACACACACACATATATACATACACATATATACACATATATATACACACATATATGTATATACACACTATATATACACACATATATACACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCAC---AGAGACACACATGTATAAGCA .:.::..::....x..:.....:.:.....x.x:...:x:.......::...x:.....:x:.....:::x::.:....:x...::.x...---.x.x........:....x:.. 91M3D21M 73/112 65.2% 112/94230402 0.0% 3/112 2.7% -65940443 -28289959 +3040 chr4 + 190214555 7180664 7180663 7180728 65 ATATATATACACACACACACACACACACACATATATACATACACATATATACACATATATATACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:...::.........:.........:....x:.x::x..x:.:..:...xx:...::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -59724183 -34506219 +3298 chr4 + 190214555 7190218 7190217 7190334 117 CTGACACTGTCAAGTTTCTCCTTCCTTCCTTCCTTCCCTTCTCTCTCTCTTTCTTCCTTTCTCGCTTTCTCTTTCTCTCTCTTTCTTTCTGTCTCTTTTCTCTCTTTCTCCCCTTCC chr4 - 94230402 18988789 18988788 18988899 75241504 75241503 75241614 111 CTGAAATTGTCACTTGACCACTTCATT------GTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACC ....x.:.....xx.xx.:x....x..------x......x.x.:.:x......::xx.:..xx:...:.......::..:.............x.xx.::..x....::x:..x.. 27M6D84M 73/111 65.8% 111/94230402 0.0% 6/111 5.4% -11798571 -82431831 +5136 chr4 + 190214555 7294927 7294926 7295080 154 CTCCCTTCTCCCCAGCTCCCCCCTCCCCCTCCCCTCCTCTTCCTCC--TCCCCTCCTCCTCTCCCTCCTCTCCCTCCTCTCCCTCCTCCCCCTTCTCCTCTCCCTCCTCCCCCCTCCTCTCCCTCCTCCCCTCCTCCTCTCCCTCCTCCCCCTCCT chr4 - 94230402 93339618 93339617 93339773 890630 890629 890785 156 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCT ......x.xx...:.........x:..x...:.....x::x....:--.::.::...x.x...:..::.....x...x..:.:....:.:x.::::.....:....:x.....:::..x:xxx.:x:...xx..:....:..xx.x....::.x.. 46M2I108M 97/154 63.0% 156/94230402 0.0% 2/154 1.3% -86044691 -8185711 +3089 chr4 + 190214555 7295086 7295085 7295166 81 TCTCCCTTCTCCCCAGCTCCTTCCT-------------CTCCCTCCTCCTCTTCCTCCTCCCCCTCCTCCTCTCCCTCCTCCTCCCTTTTATTT chr4 - 94230402 78956192 78956191 78956285 15274118 15274117 15274211 94 TCTTACTCCTACCTAGTTTCATCCTGAAGCACACACCTCCCCCTCCCTCCCTGCCTTTCCCCCATTTTTAATTCCCTTCTCCTCTCTTCTATTT ...:x..:..x..:..:.:.x....-------------.:......::.:..x...:::....x.::.:xx:.....:......:...:..... 25M13I56M 55/81 67.9% 94/94230402 0.0% 13/81 16.0% -71661106 -22569296 +3193 chr4 + 190214555 7314812 7314811 7314857 46 TTTTTTTTTTTTTTTTTTATTGTTGTTGTTGTTTTTGTTGTTGTTT chr4 - 94230402 20565645 20565644 20565690 73664713 73664712 73664758 46 TTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTTTTATAATTT ..................:.......:.......:.x..:.x:... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -13250833 -80979569 +3643 chr4 + 190214555 7314907 7314906 7314989 83 CTGCAACCTCTGCCTCCAGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCTCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:.x.........:.x...x.xx.x........::.............:....x...--.:....::.. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% -10882219 -83348183 +3153 chr4 + 190214555 7358914 7358913 7358986 73 CTGCAGTCTCAAACTCCTGGGCTCAAGTGATCCTTCTACCCAAACCTACTGAATAGCTGGAACTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:...:.:x..:..:.....:.......x.:.x:xx:x.:x.:...x:::.:..............x..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -10838212 -83392190 +9301 chr4 + 190214555 7359611 7359610 7359803 193 GATCCCGGCAGCTGGCAGCCAATGCATTCTGTCTTTGACCTTTGCCTGCTGCTGTTAGAGCATCATTCAGTGAGAGTGAATTTATTTTTCTACTGAATGTATTCCATTC--CGTGGCTGT-AGGCATTAATGTAGCTGGGATTAAAATCAGGTCAACAGGATTGAAAGTAAATAGCACTTTAACCTGAAGAATACA chr4 - 94230402 11138299 11138298 11138489 83091914 83091913 83092104 191 GGTTCCAGCAACACAGAGAAAATAAATTCCATCTTTGACCTTTTTAAACTGCTCTTATAGCATCATCCTGTAAGGCTGAATTTATTTTTCTACTGAATATATTCCATTCAGTGTGGCTATAAGGCAT-----TAGTCAGGATTAAAACTGGGTCAACAGCACCAGGAACAAATAGCACCTTAACCAGAAGAATACA .:.:..:...:.xx:x..xx...:x....::............x:xx:.....x...x........:.x..:..:x......................:..........--:......:.-......-----...:::.........:::.........x.:::::.::.........:......x.......... 109M2I9M1I6M5D64M 143/188 76.1% 191/94230402 0.0% 8/188 4.3% -3778688 -90451714 +3202 chr4 + 190214555 7373459 7373458 7373511 53 TATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTC chr4 - 94230402 92735360 92735359 92735412 1494991 1494990 1495043 53 TGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATC .:...:..:.:...............:.x.........:.x...:::...:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -85361901 -8868501 +3734 chr4 + 190214555 7387452 7387451 7387591 140 TGCACACACAGATACAGAGAT-----ACACATGCACATACATACACATGCACACAAATACAGGTACACAGAGATACATATGCACACATGCACACACATGCACATACACATATGTACACACGCACACATGCACACACATACAGGTA chr4 - 94230402 73121077 73121076 73121213 21109190 21109189 21109326 137 TACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATG--------AGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:...x......x..x.x:..-----:::......:..x.........::.....:.x:..x.--------::......:.:.:.x:.:...:x::..:::::x::......:x.:..:.x....x.x:......::..:.:.:. 21M5I37M8D74M 82/132 62.1% 137/94230402 0.0% 13/132 9.8% -65733625 -28496777 +3505 chr4 + 190214555 7387786 7387785 7387925 140 GTACATGCATGCTCACATGCACACACAGATACAGAGATACACATGCACATACATACACATGCACACACATACAGGTACACAGAGATACACACAGATGC--ACACACAGGCACACAGA-------GATATACACACATGCACACACCCAC chr4 - 94230402 89016084 89016083 89016228 5214175 5214174 5214319 145 GTGCACACAT--CTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG--ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCAC ..:..::...--:::............x:.x::x:x.:.........x..:.......:.:x.::::::.:...--....xx:x::......:.....--:.x..::.......xx:-------.x.:.:.x..:..x.....x..... 10M2D62M2D22M2I17M7I25M 88/136 64.7% 145/94230402 0.0% 13/136 9.6% -81628298 -12602104 +3166 chr4 + 190214555 7403945 7403944 7404008 64 CTCTGCCTCCATGTGTGTATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 34066878 34066877 34066941 60163462 60163461 60163525 64 CTCTGCTTTCTCAGGTGTGTGTCTCCACATTTATATATACACATATATATATATTTATTTTCCT ......:.:.x::x....:.:.x.x:.:..x........:.:..............x....::. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -26662933 -67567469 +3506 chr4 + 190214555 7403952 7403951 7404013 62 TCCATGTGTG-TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 8681920 8681919 8681982 85548421 85548420 85548483 63 TCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTT .......x..-....x..........:...::.:.:.:...:.....x:.:............ 10M1I52M 50/62 80.6% 63/94230402 0.0% 1/62 1.6% -1277968 -92952434 +3097 chr4 + 190214555 7403960 7403959 7404026 67 TGTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTAGTATCCATTTAT chr4 - 94230402 8681931 8681930 8681997 85548406 85548405 85548472 67 TATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTGAT .:..x..........:...::.:.:.:...:.....xx.:.............x.:x.x.:x..x.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -1277971 -92952431 +3063 chr4 + 190214555 7403964 7403963 7404013 50 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735397 1495006 1495005 1495055 50 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT .::....x.....:...:..:.:..........x....:.x......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -85331384 -8899018 +3095 chr4 + 190214555 7403966 7403965 7404013 48 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735395 1495008 1495007 1495055 48 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTT .::....x.....:...:..:.:...............:.x....... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -85331382 -8899020 +3348 chr4 + 190214555 7411303 7411302 7411491 189 CCAGGGACCCCTCTGTCACTGCTTCTAGCTTCTCTGCCTACTGACTTTCCTTCTTTTTCTCTTTCCTCTCTTCCCTT--CTGCCTTT---TTCCTTCCCTTGCTCCCCCTTTCCCATGTATCCATCCACCTATCT-GATCAACCATCAAT---GCTTTCTTCCTTCCTTCCATTC-CTCTATCTTCTCTCCTCATTTCT chr4 - 94230402 26883483 26883482 26883676 67346727 67346726 67346920 194 CCAGCTCCCTCTCTTTGTCTTTTTCTGCCTGATATACTTA-----TTTCCCTCTCCTTTCTTTACTGCTTGTTCCTTTCCTGACTCTGTGCTTCTTTCCCAGTTCCCCCTTTGCCATCTATCCTTCCCTCTGTTTCCCTCTAACATCTGTTTCATTTGCCTCATTCCTGCCATACACGTTGGCTTGTTTCTCCCTGTCT ....xxx..:....x.xx..x:....:x..xx.x.:.:..-----.....:...::..:::..x.:x..:x.:....--...x..:.---:.:...:..:x.:.........x....x.....x...x:..:.:.-xx..x.x....x:.---::..x.:..x.....x....x.-.x:.:x...x.:..::.x.x... 40M5D32M2I8M3I45M1I14M3I22M1I23M 118/184 64.1% 194/94230402 0.0% 15/184 8.2% -19472180 -74758222 +4456 chr4 + 190214555 7416726 7416725 7416824 99 ACACACACGCATGCACACACAC--TTGTGCGCACACAGACACATGCATGCATGTACA--------CACACGCTTGTGCACACACAAACATGCATGCATGTACACACTTG chr4 - 94230402 89016088 89016087 89016196 5214207 5214206 5214315 109 ACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTG .....:x:..............--...:..:......x:..x......:..:...x.--------..x..:....:........::.:::.:::x....x:.....:.. 22M2I33M8I44M 73/99 73.7% 109/94230402 0.0% 10/99 10.1% -81599362 -12631040 +4284 chr4 + 190214555 7416838 7416837 7416976 139 ACATGCATGCATGCACACACACACTTGTGCATGCTCAGACACACACATATGCATGCACACACACGTGTGCAGACACACTGACACATTCACACACACGCACACAT----ACTCTCGCAC---------ACACACACCCACACACCCA-TGCCTC chr4 - 94230402 89016088 89016087 89016234 5214169 5214168 5214315 147 ACACATCTGCATGCACACACACGTTTGCGCAC------ACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCACTGCCCC ...:::x...............::...:...:------.....::..x......:...::.x.:.....::x.x.....x:.:..:x...:x.::..::.x...----..x.::....---------:.x..:.:......x....-....:. 32M6D66M4I10M9I19M1I6M 92/133 69.2% 147/94230402 0.0% 20/133 15.0% -81599250 -12631152 +3232 chr4 + 190214555 7416873 7416872 7416947 75 CAGACACACACATATGCATGCACACACACGTGTGCAGACACACTGACACATTCACACACACGCACACATACTCTC chr4 - 94230402 90815403 90815402 90815477 3414926 3414925 3415000 75 CAGGCGAGCTCTTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTTTC ...:.:x:.x.x.:.:::.:.....:..xx......x...:..x.......x......:.x......x:.:.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -83398530 -10831872 +3929 chr4 + 190214555 7416879 7416878 7416972 94 CACACATATGCATGCACACACACGTGTGCAGACACACTGACACATTCACACAC------ACGCACACATACTCTCGCACACACACACCCACACACCCATG chr4 - 94230402 89016087 89016086 89016186 5214217 5214216 5214316 100 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATG .......x.................x...:x......xx:..x..x..:....------::.::::..x..x..:..:.......:xx::.:::...... 53M6I41M 66/94 70.2% 100/94230402 0.0% 6/94 6.4% -81599208 -12631194 +3043 chr4 + 190214555 7430368 7430367 7430410 43 AAACAAACAAACAAACAAACAAAACAAAAACAACAACAACAAA chr4 - 94230402 20093818 20093817 20093860 74136543 74136542 74136585 43 AAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAA ...................x..xx...x.....:......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -12663450 -81566952 +3035 chr4 + 190214555 7430369 7430368 7430410 42 AACAAACAAACAAACAAACAAAACAAAAACAACAACAACAAA chr4 - 94230402 37986046 37986045 37986087 56244316 56244315 56244357 42 AAAAAACAAGCAAACAAACAAAACAACAGCAACAACAAAAAA ..x......:................x.:.........x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -30555677 -63674725 +3067 chr4 + 190214555 7430369 7430368 7430416 48 AACAAACAAACAAACAAACAAAACAAAAACAACAACAACAAAGCAGCT chr4 - 94230402 24395494 24395493 24395541 69834862 69834861 69834909 48 AATAGAAAAAAAACCAAACCAAACCAAAACAACAACAACAAAACAGCT ..:.:.x...x..x.....x....x.................:..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -16965125 -77265277 +3700 chr4 + 190214555 7432407 7432406 7432498 92 TCTCAACATTCTTGTGAGGCAGGTA----TGATCATCCCCATTCTACAGATTAGAAAACTGAGGCTCAGACAGCTGGAGGGCTGTGTTCACCGTCT chr4 - 94230402 10729168 10729167 10729263 83501140 83501139 83501235 96 TCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ..x...:.::.:.......:.....----:x....x.:.....:.....:.x:............x..x....x.x:..x:x.x..::..xx.... 25M4I67M 65/92 70.7% 96/94230402 0.0% 4/92 4.3% -3296761 -90933641 +3830 chr4 + 190214555 7448782 7448781 7448903 122 CCCGCCCTCCCTCCCTTCCTCTTTTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCT-CCCTCCCTCCCTCCCTCC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCT-CCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC .::...:...xx...:::.:.....::.....:......:..:..::x.x.x.x..::x....:....-.....:x:x.x:x:x..:x..:..x.x...:.x..-.:.........::...:. 68M1D35M1I18M 77/121 63.6% 122/94230402 0.0% 2/121 1.7% -84726046 -9504356 +3295 chr4 + 190214555 7448784 7448783 7448907 124 CGCCCTCCCTCCCTTCCTCTTTTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCC chr4 - 94230402 92174826 92174825 92174949 2055454 2055453 2055577 124 CGCTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC ...::x..:...xx:..:..::::::.::.....:......:.:....:x.x.x:x:.:.x.::.::.....::.:x.x.x.x:x..:x:..::x.x....:x.:x.:.........::...:. 124M 68/124 54.8% 124/94230402 0.0% 0/124 0.0% -84726042 -9504360 +8866 chr4 + 190214555 7448871 7448870 7449150 280 CCTCTCTTCCTCCCTCCCTCCCTCCC---TCCCTCCCTCCCTCCCTGCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTTCCCTCTCTCCCTCCCTTCCTGTCTTTTCCCT--CTCTCCCTCCCTTCCTCTTTTCCCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTCTTTTCCC chr4 - 94230402 92729432 92729431 92729702 1500701 1500700 1500971 271 CTTCTTTTCCCCCTTCGTTCCCTCCTGTTTTTTCCCTTCTTTCCCAGTTTTCTTtttcttttcccttcctcttcctttcccccttctttctccattttcttttttccccttcctctcctcccccccccttttttcctcttctatttcc----------attttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCC---CTCACTTCTTCCC-CCCACCTTTCTTCTCTTCCC .:...:....:..:..x:.......:---.::::..:..::....x.::.:.:.:::::::.....:....:::....:...::...::....x..:::x.:...:....--......::...::..::....:.....::.x:.:..----------x:..:..::..:.:..::.:..x:::...:...:.:x:....::.x.x:.x...:.:x.::....:..:.::x:.:::.......:....---...x..:.:....-...x..:...:...:..... 26M3I81M2I36M10D90M3D13M1D20M 165/266 62.0% 271/94230402 0.0% 19/266 7.1% -85280561 -8949841 +3133 chr4 + 190214555 7449080 7449079 7449136 57 CCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCC chr4 - 94230402 69357097 69357096 69357153 24873250 24873249 24873306 57 CCTCCCTCTTTTCCCCGCTCCTTTCCTCCCCCCCCTTGTCACTCCCCCTTACTTTCC ........::....:.x....:........:...:.:x..x.....:.::x.::... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -61908017 -32322385 +3011 chr4 + 190214555 7449206 7449205 7449262 57 CCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC chr4 - 94230402 69357097 69357096 69357153 24873250 24873249 24873306 57 CCTCCCTCTTTTCCCCGCTCCTTTCCTCCCCCCCCTTGTCACTCCCCCTTACTTTCC .........:....:.x....:.:......:...:::x..x.....:.::x.::... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% -61907891 -32322511 +3352 chr4 + 190214555 7449245 7449244 7449355 111 CCCTCCCTCCCTCCCTCCCTCCCTCCCT-------TCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCCTTTCTTCCCTTCTCTCTTCCTTCCCTTCTCCCTTCCTTCTTCCCTCCTTTC chr4 - 94230402 83016315 83016314 83016432 11213971 11213970 11214088 118 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTC .:..:...:xxx.:..x.:..x...:..-------..x..:....::..:.:.:x.:.......::....x::.:..:x..:x:::......x::.xx...:..x..:..:.:..... 28M7I83M 68/111 61.3% 118/94230402 0.0% 7/111 6.3% -75567070 -18663332 +3518 chr4 + 190214555 7468896 7468895 7469023 128 GCTCCACATCTGGTGGCCGTGTGACCTTGGACAAGTCACTTAACCTCTCTGAACTGCAATGTGCTCATTTGTAAAATAGGAAAAATGAACAGCACTACTCTGAAGAGTTGTTGTGAGGGTAGAAATGA chr4 - 94230402 11909554 11909553 11909673 82320730 82320729 82320849 120 GCTCTATTTCTGGCACC---GTGACCTTGGGCAAGCCATTTAACTTCTCTGTGCTGCTGCTTATGCATCACTAATATGGATAGAATTA-----CCTACCTCAGAAAGGTGTTAAGAGGGCTAAAGGGA ....:.:x.....::x.---..........:....:..:.....:......x:....x::x.::x...:xx...x..:.:x.:...x.-----x....:::::.:..x....:x.....:x:..:x.. 17M3D68M5D35M 77/120 64.2% 120/94230402 0.0% 8/120 6.7% -4440658 -89789744 +3000 chr4 + 190214555 7484750 7484749 7484819 70 TCACAACACACACCACCTCCTGCACCCAGCCCTCCTGCACCCAGCCTCCCTCCTGCACCCAGCCCCGCTC chr4 - 94230402 83223247 83223246 83223316 11007087 11007086 11007156 70 TCACAGCACACACTGCCTCCTGCTCCCTGCCTTCCTGCTCTCTGCCCTTCCTAGGTCCCTGGGGCAGCTC .....:.......::........x...x...:......x.:.x...:::.::xx.:x..::.xx.x.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -75738497 -18491905 +3308 chr4 + 190214555 7522608 7522607 7522699 92 TCTTCCCCTTCCCCTTTTCCCTCCCTCCTCCTCCCTCCTTTTCTCCCTCCTTCTTTCCTCCTCCCTTTCTTCCCTCTTCTTCCTCCCTTTTC chr4 - 94230402 18501281 18501280 18501372 75729031 75729030 75729122 92 TCACTCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCC ..x::.....:x.....:.x::...:..:..:..........:.::.:..:::..x.::.x..:x:xx:...:....x.:x.x..:....:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% -10978673 -83251729 +4236 chr4 + 190214555 7522810 7522809 7522997 188 CTCCCTGTCTCCCTTCTCCCTCCCTCCTCCCCCCACTTCTTCCTCCCTTTTCCCTCCCTTTCTCCCCTCTTCCCTCCTCCCTCTTCTCTCCTCCCTCCTCCCTCTTCTCTCCTCCCTGTTCCCCCTCCCTCTTCCCCCATCCTTCCCCTTCTCCCTTTTTCCCTCCTTCCTTCCTTTCTTCTCCTTCC chr4 - 94230402 93339618 93339617 93339781 890622 890621 890785 164 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTC------------------TCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCT------CCCCAGCATCCCTTTGCTGGACTTCC .......:xx...xx.....:..x...x.:.:..x.:x::x....:xx....------------------.....x.x.:.....:.....x:..x.:..:::.....x:.......x....:.:x...:..::.:x..xx:.x....xx.:....------.:..xx.x.:.....x:.xxx..... 52M18D86M6D26M 106/164 64.6% 164/94230402 0.0% 24/164 14.6% -85816808 -8413594 +3153 chr4 + 190214555 7523005 7523004 7523073 69 CTTCCCTCTTTGTCACTCCCTCCCTCTTCCCTCCCTCCTCCCTCCTTCCTCCCCTTCTCTCCCCTTTCC chr4 - 94230402 83554916 83554915 83554982 10675421 10675420 10675487 67 CTTGACTCATACTCATTTCTTCTCCC--CCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC ...xx...x.xx...:.:.:..:.:.--....x.....:.........:.:..:.......::...:.. 26M2D41M 49/67 73.1% 67/94230402 0.0% 2/67 3.0% -76031911 -18198491 +3514 chr4 + 190214555 7580984 7580983 7581070 87 CCTTACAACAATCTTATAAGGAAGACA--TGATGTCA---TCATTTTACAGATGAGGAAACTGAGGCTCATAGAAGAAAGGTGGTTTGCCCA chr4 - 94230402 10729166 10729165 10729257 83501146 83501145 83501237 92 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ...:....:.x:.:.:.:...x..::.--.:x.:...---:..........:..:.:..........x....x.:.xx.:..::........ 27M2I8M3I52M 62/87 71.3% 92/94230402 0.0% 5/87 5.7% -3148182 -91082220 +3171 chr4 + 190214555 7599787 7599786 7599878 92 TTCATCCTAAGAGCTGTGGGGTGGGTTTTCTTTTTTCTTTTTTTTTTTTTTTATTGAGACAGAGTCTTGCTG-TGTCACCCAGGCTAGAGTGA chr4 - 94230402 1673743 1673742 1673825 92556578 92556577 92556660 83 TTTATGCTGTTGGCTCTGGCGTGGGCTTTTTTCTTTCTTTTTTTTTTCTTTAATTG----------TTGTTGTTGTCATCCTCTCCAGAGAGA ..:..x..:xx:...x...x.....:...:..:..............:...x....----------...:..-.....:..xxx.:....x.. 56M10D6M1I20M 62/82 75.6% 83/94230402 0.0% 11/82 13.4% 5926044 NA +3186 chr4 + 190214555 7600641 7600640 7600706 66 ATATACATATATATATACACACACACACACACACACACACACACACACACACACACACGATTAAAA chr4 - 94230402 8395808 8395807 8395873 85834530 85834529 85834595 66 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA .:..::..x..:....::.::.x:...:xx.:.................x.....x.:..x..... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -795167 -93435235 +3235 chr4 + 190214555 7609183 7609182 7609249 67 TTTGTTGTTGTTGTTGTTTTTCATTTGTTTGTTTTTCCTTTTCAAGGTGAGTAACAATCCTTGCCTT chr4 - 94230402 35084348 35084347 35084413 59145990 59145989 59146055 66 TTTGTTGTTGTTGTTGTTACTGATTTGTTTGTTTTG-TTTTTTAATGTTGGGAATAATTCTTTTTTT ..................x:.x.............x-:....:..x..x:.x..:...:...x::.. 36M1D30M 51/66 77.3% 66/94230402 0.0% 1/66 1.5% -27475165 -66755237 +4041 chr4 + 190214555 7619919 7619918 7620142 224 CAGCCCCTGCCCCTGCCCCTGCCCTGTCCCCA-----GGCACC----TGGTCTCGCTCACT---CTAGAAACAGCTGCATCTAGTTACACCTCTTTTTTCTCCTCCTCCTCCTTCCTCCTCCTCCTCCTTCCTCCTCCTCCTCCTTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTTCATCTGCTGGGCTGGGGACCACTGGGCGTTTCTCCTGAGCACCCCCAGCACCTCTT chr4 - 94230402 92411539 92411538 92411750 1818653 1818652 1818864 212 catccccttctccttctccattcccatccccatccccgtcaccatctccatccttatcactgtcccatccccatctccatcTCATCCCACCTCTGTCTCCTACTCCTCCTCTTCCAACCCCTCTCCATTCCCATATCCTCCTGCTTACTCTCCCTCCT-----------------------GCCTGTAGGGCTGGGTGCAGTCAGG-GCGTCTTCTGATCTCCAGCGGTGCCTCCT ..x.....x.:...x.:..xx:..::......-----.x....----:x:..::xx.....---.:.xxxx..x..x.....x:.:x.......x.:.:..x.........:.:.xx..:.:::.:x:.:..x:x.......x...x....:......-----------------------::...:x........x:.x::::..-.:x...:....x.x..xx.:.::....:. 32M5I6M4I14M3I94M23D25M1D29M 127/200 63.5% 212/94230402 0.0% 36/200 18.0% -84791620 -9438782 +3342 chr4 + 190214555 7627061 7627060 7627132 72 CTGCAACCTCTGCCTCCCAGGCTCAAGAGATCCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACTACACGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::..:.....x.x.:.x.xx.x......:.::...........:........... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -10570065 -83660337 +3050 chr4 + 190214555 7701191 7701190 7701258 68 GAGGGAGAGGGGAAGAGGGAGAGAAGGGGGAAGGGAGGGAGAGAGAGAAAAAAGGAGAGAGGAGGGAG chr4 - 94230402 10584954 10584953 10585021 83645382 83645381 83645449 68 GAGGAGTAGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGAG ....::x...:....:.::xx:..:x:..:....:.:...:..:.:......x.:..:::........ 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% -2883763 -91346639 +3130 chr4 + 190214555 7701194 7701193 7701248 55 GGAGAGGGGAAGAGGGAGAGAAGGGGGAAGGGAGGGAGAGAGAGAAAAAAGGAGA chr4 - 94230402 19799668 19799667 19799722 74430681 74430680 74430735 55 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA ...:...::.....:x..:.........:....:.:.:.::..:......:::.. 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% -12098474 -82131928 +3026 chr4 + 190214555 7795402 7795401 7795456 55 AATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTT chr4 - 94230402 69960040 69960039 69960094 24270309 24270308 24270363 55 AATCTTGTTTTTTTCTTTTTGTTTGTTTGTTTGTTTTTTAATGAACTAGAGTCTT ......x.......:.....x...x...x...x......xx...:x:........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -62164638 -32065764 +3126 chr4 + 190214555 7827571 7827570 7827623 53 AAAAAAAAAAAAAAAAAAAAGGGAGAGGAGAGAAAAATGAGGCAAGAGAGGAC chr4 - 94230402 37322393 37322392 37322445 56907958 56907957 56908010 53 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGAC .....:...............:.....:::...x::.x....x...:.x.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -29494822 -64735580 +3665 chr4 + 190214555 7848106 7848105 7848212 107 AGGAAGGAAGGAAGGAAGGAAGGGAGTGAGTGAGGGAGTGAACAGGTAGATGGGTAAGTGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGCAAGGGAGGGA chr4 - 94230402 12888306 12888305 12888410 81341993 81341992 81342097 105 AAAAAATAAGGAAGGAAAGAAGGGATTGAGGAAGGGAGGGGACAGGTAGAGGTGTCTTGAAGAGATTGGTAAATAGGCAGAAATGCAGAAGTAAAG--AGGGTGGGA .::..:x..........:.......x....x:......x.:.........x.x..xxxx::...:xx..x.::x...x..:..x.x..:.:x:...--....x.... 96M2D9M 71/105 67.6% 105/94230402 0.0% 2/105 1.9% -5040200 -89190202 +4316 chr4 + 190214555 7868809 7868808 7869047 239 GAACACTTTGCAAATATTTATTTTCTCTAATCCTTTACAACAGTCCTGCA--AGGTTAGGTATT-ATTCTTCTCCATTTT-ACAGGTGAAGAACCGACAGCTTAAATAAAGTGAAAGAAAAGAAAAGAGAAAGAGAAAGAGAAAGGGA-------AAGGGAAAGAAAAGAGAAAAGAAAAA-----AGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAA chr4 - 94230402 83504042 83504041 83504289 10726114 10726113 10726361 248 gaacaaaCCACCCATTTTTATGTTCTTTAAT---TTGCATT--TTCTGCATGAAATAAGACCTTGATCCTTGTCTTTTTTCACAAAAGCAGGTTCTGC--TTTAACTAATGTaaaaaaaaaaaaaaaaaaaaaaaggaaagaaaaTAATGTTTCTATAGCAAAGTGATTTAGATGTAGAAATTTTTGTAAAAAAAAAAAAAACGGGGGGAGGAGAAAAAAAAGGGGGGGGGAAACAACAAAGAAATAAAATAAAA .....xx:::.xx..x.....x....:....---..:..x:--.:.....--.::.x..::x..-..:...x..:x....-...::x.x..:x:.x:.--:....x...x..:...:....:....:.:...:.:::.:.....:x:.-------.x:.x....x:.xxx::.x:x.:...-----:x......:....:..x:.:.::..:::..:::......:::......x..x.......x....x.... 31M3D7M2D7M2I12M1I15M1I17M2D48M7I26M5I69M 147/232 63.4% 248/94230402 0.0% 23/232 9.9% -75635233 -18595169 +3865 chr4 + 190214555 7868905 7868904 7869034 130 CTTAAATAAAGTGAAAGAAAAGAAAAGAGAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAG chr4 - 94230402 30533161 30533160 30533286 63697117 63697116 63697242 126 CTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTC----AAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..........:x.:......::...:::.::.........xx:x.::....x:..:.xxx----..:.x...:.xx:...x....:.:x:.:..:...:...:.:::x.xx.......::.:...x.... 60M4D66M 79/126 62.7% 126/94230402 0.0% 4/126 3.2% -22664256 -71566146 +3995 chr4 + 190214555 7868912 7868911 7869142 231 AAAGTGAAAGAAAAGAAAAGAGAAAGAGAAAG------AGAAAGGGAAAGGGAA-AGAAAAGAGAAAAGAAAAAAGAAAAAA----GAAAAGAAAAGAGAAAGAG-----AAAGGGAAAG--GGAAAGGGAAAGAAAAAA-----GAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGA-----------GAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAATAAAA chr4 - 94230402 72111943 72111942 72112205 22118198 22118197 22118460 263 AAAGTTCATGGGGGGAAATGAGTATAACCAAGTCATTCAGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGTGAGTCCAGGAA--GGGAATGGAAGTACTGCCAAACAAAGAGTGAGa .....xx.x.::::....x...x.x:.xx...------...:.:.:.::.:...-.:.........::x.x....x..x..x----.:x....x....::.....-----...x::....--.....x...:...:....-----............:..:x.xx:..:.x:x..:.:::..x.xx.x...:...x..-----------.......x:x...xxx:....--..:..:....:x.xx:xx:..x.....:.:.:. 32M6I16M1I27M4I19M5I10M2I18M5I53M11I21M2D33M 150/229 65.5% 263/94230402 0.0% 36/229 15.7% -64243031 -29987371 +3362 chr4 + 190214555 7868933 7868932 7868986 54 GAAAGAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAA chr4 - 94230402 19799669 19799668 19799722 74430681 74430680 74430734 54 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA .....::.......x......:...:.:.::....:...:.......:...::. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -11930736 -82299666 +3298 chr4 + 190214555 7868937 7868936 7869047 111 GAGAAAGAGAAAGGGAAAGGGAAAGAAAAGAGAAAAGAAAA----AAGAAAAAAGAAAAGAAAAG------------AGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAA--GAAAGAAAAGAAAA chr4 - 94230402 47789431 47789430 47789556 46440847 46440846 46440972 126 GAGAAAAAGAAAGGAAAAGGGAAAGGGGAAGGGGAAGAAAATGTTAACAGGATAGAACCACATAGGTTTCCAGTGCAAGTGGGAGCAAGGAAAA---AAAGAGAAAGGATAAACTGAGAGTAATGAAAA ......:.......:..........:::.::.::.......----..x.::.x....xx:x.x..------------..x::...x....:...---....:.....:.x...--..:..x..x..... 41M4I20M12I17M3D16M2I14M 79/108 73.1% 126/94230402 0.0% 21/108 19.4% -39920494 -54309908 +3020 chr4 + 190214555 7868951 7868950 7869055 105 GAAAGGGAAAGAAAAGAGAAAAGAAAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGA chr4 - 94230402 89680214 89680213 89680318 4550085 4550084 4550189 105 GAAATGGAAACTAGAAAGAAAGGCCAAAAAAAAAAAAAGCCAACAAAAAAAATCCCAACATTAGCTGAGGAGGAAAGAAGAAAGAGGGAAAGCACAGAGGGAAGA ....x.....xx.:.:.....:.xx....:......:.:xx:.x..:.:...xxxx..x:xx.:xx..:::........:.....::....:x.x.:::.:.... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% -81811263 -12419139 +3189 chr4 + 190214555 7868975 7868974 7869016 42 AAAAAGAAAAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGG chr4 - 94230402 43002944 43002943 43002985 51227418 51227417 51227459 42 AAAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAG .............:....::...:.....:..........:. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -35133969 -59096433 +3105 chr4 + 190214555 7868988 7868987 7869032 45 AAAAGAAAAGAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAA chr4 - 94230402 43002945 43002944 43002989 51227414 51227413 51227458 45 AAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAGAGGA .........:..:..::.:....................::.::. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% -35133957 -59096445 +3066 chr4 + 190214555 7868997 7868996 7869049 53 GAGAAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGA chr4 - 94230402 55458165 55458164 55458217 38772186 38772185 38772238 53 GGGAGGGAGGATGGGAAAAGAGGAGGGGAAAAAAAAAGACAGAGAAAAAAAGA .:..::...:.x......:.:::....:..:........x...:..:...... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -47589168 -46641234 +3287 chr4 + 190214555 7869000 7868999 7869090 91 AAAGAGAAAGGGAAAGGGAAAGGGAAAGAAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAA----GAGAAAAGAAAAAAGAAAAGAGAAA chr4 - 94230402 7739259 7739258 7739345 86491058 86491057 86491144 87 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAG--------AGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA .:..:....::x.:....:::...:..:...........--------...:..x.x:::....:..----..:....:......:....xx.... 39M8D19M4I25M 60/83 72.3% 87/94230402 0.0% 12/83 14.5% 129741 NA +3124 chr4 + 190214555 7869028 7869027 7869098 71 AAAAAAGAAAGAAAAGAAAAGAGAAAGAGAAAGGGAAAGAGAAAAGAAAAAAGAAAAGAGAAAGAAAAAGA chr4 - 94230402 25066986 25066985 25067056 69163347 69163346 69163417 71 AAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA ..:.x...x....:.:.x..x...:..x.::..x::...:.:...:..:..........x..::...:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -17197958 -77032444 +3239 chr4 + 190214555 7869087 7869086 7869137 51 GAAAGAAAAAGAGAAAGGGAAAGGGAAACGGAAAGAAAAGAGAAAAAAGAA chr4 - 94230402 19799669 19799668 19799719 74430684 74430683 74430734 51 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAA .....:........x......:...:.:x....::.....::......:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -11930582 -82299820 +3241 chr4 + 190214555 7947908 7947907 7947987 80 CAGAGCAAGACTCCATCTGAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAATAATGGAAGCCAAAGGTAATGGAATA chr4 - 94230402 32280597 32280596 32280667 61949736 61949735 61949806 71 CAAAGTAAAAGTCCACT--------AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAG-GATGGAGTA ..:..:..:.x....::--------............................:..x.....:xx.x.:.-:.....:.. 17M8D45M1D9M 56/71 78.9% 71/94230402 0.0% 9/71 12.7% -24332689 -69897713 +3963 chr4 + 190214555 7976676 7976675 7976786 111 CACACATGTGCATGCACACACATGCACACACACGTATATCCATATGCATACACACACATACACATATGCAAA----TATGCACACACATATACAGACACATATACACATACACAC chr4 - 94230402 89016087 89016086 89016199 5214204 5214203 5214316 113 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGAT--GTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC .......x..............:.:x::.:...::.:..x..x..........::.x..--:::.:....:.----.::........:x..:.:x:.x...:x:....:x::... 59M2D11M4I39M 73/109 67.0% 113/94230402 0.0% 6/109 5.5% -81039411 -13190991 +3689 chr4 + 190214555 7976724 7976723 7976863 140 TACACACACATACACATATGCAAAT--ATGCACACACATATACAGACACATATACACATACACACAAGTATACACACATACACATGTATACACACATAGACGCACATACACACATGCACACACATATACACACATACACGTA chr4 - 94230402 73121077 73121076 73121213 21109190 21109189 21109326 137 TACACCCACAGAAAC---TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAG--TACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .....x....x.x..---..:..x:--:..::..::.....x..x.............x.x:..::..--....:..:..:.x:.::.::x::.:..:x:x.:.....:.x.:.:..x....x.x.:.....::..:.x.:. 15M3D7M2I41M2D72M 86/135 63.7% 137/94230402 0.0% 7/135 5.2% -65144353 -29086049 +3025 chr4 + 190214555 7976754 7976753 7976816 63 CACACATATACAGACACATATACACATACACACAAGTATACACACATACACATGTATACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ..:...x..:..x...x..:..:.:.:....:..x.......x.....:..x.::::..:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 380342 NA +3472 chr4 + 190214555 7976761 7976760 7976869 109 ATACAGACACATATACACATACACACAAGTATACACACATACACATGTATACACACATAGACGCAC----ATACACACATGCACACACATATACACACATACACGTATACATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x:.....:.........:.........x.:.:..:...:x:x:.x.::...:::..x:.x...:----...:......::x:.:x:....:.-....x....xx.:.:... 66M4I24M1D18M 71/108 65.7% 112/94230402 0.0% 5/108 4.6% 3559418 NA +3288 chr4 + 190214555 7976772 7976771 7976907 136 TATACACATACACACAAGTATACACACATACACATGTATAC----ACACATAGACGCACATACACACATGCACACACATATACACACATACACGTATACATACATAAACATACACACACGCATATACACACATACATGTA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGA-AACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.....x:...x.-..x.:..xx.x.:.:::....:...:----.......x..:..x.x:..::x:.:..:..::...x::....:x::.::.:.:x:......x.x....:.x...:x.x.:.....::..:.x.:. 14M1D26M4I95M 81/135 60.0% 139/94230402 0.0% 5/135 3.7% -65144303 -29086099 +3106 chr4 + 190214555 7976870 7976869 7976932 63 CATAAACATACACACACGCATATACACACATACATGTACACACACACATACACACATACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ....x.x..:..:...x:::....:.....::......:...x...:....x:..::..:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 380458 NA +3042 chr4 + 190214555 8017260 8017259 8017317 58 CTTGTGTTCCTAATTCCCTATTTATTATTATTATTATTATTATTTTTTTTTTTCAGAG chr4 - 94230402 67391619 67391618 67391676 26838727 26838726 26838784 58 CTTATTATCCTTAATTTCTATTCAACATCATTATTATTATTATTTTTTCTTCTTAAAG ...:.xx....x.x.::.....:.x:..:...................:..:.:.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -59374359 -34856043 +3585 chr4 + 190214555 8017375 8017374 8017435 61 CTCCTGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...........:xx...x.xx.x........::.:.........:......x...... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -10179764 -84050638 +3163 chr4 + 190214555 8036790 8036789 8036858 69 GGCTTAAACATGTGTACATGCACGCACACGTACAAACACAGACACGCACACATGCAAACACACACACTG chr4 - 94230402 14964818 14964817 14964886 79265517 79265516 79265585 69 GACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTG .:.x:...:....x.:.:..::.:...::...::x.:.:.x.xx.:..........x............ 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -6928028 -87302374 +3041 chr4 + 190214555 8039875 8039874 8039935 61 TTTTTTTTTTTTTTTTTTTTTTAATAAATGCAGATTGCTTTTGGCAGAAAGAAAAGAGCAG chr4 - 94230402 87377560 87377559 87377620 6852783 6852782 6852843 61 TTTTTCTCTTCTTTTTAACTTTAATAAATTCAGATTTCCTTTGAGGAAAAGCAAAAACCAG .....:.:..:.....xx:..........x......x.:....:x::....x...:.x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -79337685 -14892717 +3123 chr4 + 190214555 8056281 8056280 8056341 61 ACACAGTTTCTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGAGACAGGG-----TCTCACTCTG chr4 - 94230402 70081451 70081450 70081516 24148887 24148886 24148952 66 ACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTG .......xx:..:.....:...:...............::..:.:.:.:..-----.x.:...... 51M5I10M 47/61 77.0% 66/94230402 0.0% 5/61 8.2% -62025170 -32205232 +3307 chr4 + 190214555 8057174 8057173 8057252 79 CTGCAACCTCTGCCTCCCAGGTTCAAGAGACTCTCATGCCTCAGCCTTCTGAGTAGCTGGGATTACAGGCATGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.::........x.x:..x..x.x.........:::.........:.:....--.:...:.... 67M2D10M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% -10139952 -84090450 +3202 chr4 + 190214555 8066301 8066300 8066351 51 GTCTCAAAAAAAAAAAAAAAAGAAAAAAGAAAGGAGGGAGGGAGAGAGGGA chr4 - 94230402 6440203 6440202 6440253 87790150 87790149 87790200 51 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA ....:.....:.....::...:......:::....:.........x:.:.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 1626098 NA +3377 chr4 + 190214555 8066306 8066305 8066380 75 AAAAAAAAAAAAAAAAGAAAAAAGAAAGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 40472546 40472545 40472618 53757785 53757784 53757857 73 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAA--AAAGATGGAAGAGA ........:........:.....:..:.::...:...:.:.:....xxx.:.::.x...--..:..x.....::. 59M2D14M 52/73 71.2% 73/94230402 0.0% 2/73 2.7% -32406240 -61824162 +3612 chr4 + 190214555 8092923 8092922 8093006 84 TCTGCAACCTCCACTTCCTGGGTTCAAGAGATTCTCCTGCCTCGGCCTTCCAAGTAGCTGGGATTACAGGCGCCCACCACCACG chr4 - 94230402 18197125 18197124 18197206 76033197 76033196 76033278 82 TCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ...:..:..:xx.x:.:...........x.x...x.xx.x...:.....:...........:.:....--..:x......:::. 68M2D14M 59/82 72.0% 82/94230402 0.0% 2/82 2.4% -10104202 -84126200 +3259 chr4 + 190214555 8093064 8093063 8093139 76 GTCTCAAACTCCTGAGCTCAAGTGATCTACCCGGCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCG chr4 - 94230402 18197131 18197130 18197204 76033199 76033198 76033272 74 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG .:.:x..:..:...:.:.......x.::..xx..........::...:xx.....:.:....--....x:....:. 62M2D12M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% -10104067 -84126335 +3710 chr4 + 190214555 8094896 8094895 8094990 95 TTCCTTCCCTCCCTCCC-TCTCTTCCCTCCCTCCCTCCCTTTCTTCCTTTCCTCCCTTCCTTTCCCTCCCTCCTTCCCTCC-CTTTCTTTCTCTTTC chr4 - 94230402 92729605 92729604 92729701 1500702 1500701 1500798 97 ttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ........:.:x:....-..x:x..x.:....x::..:.:..:.:.:x..::.::.:.....:.....x..:......:..-.:..::.......:. 17M1I63M1I15M 64/95 67.4% 97/94230402 0.0% 2/95 2.1% -84634709 -9595693 +3746 chr4 + 190214555 8094959 8094958 8095095 137 CCTCCCTCCTTCCCTCCCTTTCTTTCTCTTTC-------TTTTCCTTTTTCTTTCTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTTCCTTCCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCG------ATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ......:xx:x.x.......:...:x.x:...-------.x.:...::..:.:::...:.:......x.:.:..x:::.:.x..:.x------x....xxx:....x.:.......:...:.......x.xx..::........ 32M7I48M6D51M 85/131 64.9% 138/94230402 0.0% 13/131 9.9% -34986928 -59243474 +3105 chr4 + 190214555 8094961 8094960 8095013 53 TCCCTCCTTCCCTCCCTTTCTTTCTCTTTCTTTTCCTTTTTCTTTCTTTCTCT chr4 - 94230402 27426822 27426821 27426874 66803529 66803528 66803581 53 TCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCT ..:......x...x.:x::.:.:..:......:.:......:........... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -19331861 -74898541 +3184 chr4 + 190214555 8094989 8094988 8095118 130 TCTTTTCCTTTTTCTTTCTTTCTCTCTCTCTCTCCCCCCACTTCTTTCCTTCCTTCCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTCTTTCCTTTTCTTTCTTTT chr4 - 94230402 69531370 69531369 69531496 24698907 24698906 24699033 127 TCTTTTCTTTTTT---TCTTTCTTTCTCCCCCCCCCCGCCCTCCCCCCCCGAAATCCCAAATTATTTATTTGTTTGACTGAAGTCCTCACGATATTTCATTTTATTTTATTTTTTACTTTTTTTCCCTCT .......:.....---.......:....:.:.:....x.x..:.:::..:xxxx...:xxx..x...x...x.:.xx..xxxx.:...x.xx.x.:..x..:.x.:..x:.:...x.....:..:.:.:. 13M3D114M 79/127 62.2% 127/94230402 0.0% 3/127 2.4% -61436381 -32794021 +3180 chr4 + 190214555 8180682 8180681 8180756 75 CACACATGTGTATGTGCATATGTGTATATATGTGTATCTGTGTGCATGTATGTGTATGCATGTGTGCATGTGTGT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x:.:...:...:::...:::::.:.x..:.::..x.x.x..:...:......x........x::........ 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -63449449 -30780953 +3013 chr4 + 190214555 8180784 8180783 8180832 49 TGTGTATGTGTGTAGGTATGTGCACATGTGTGTATGTGTATATGTGTGT chr4 - 94230402 39479036 39479035 39479084 54751319 54751318 54751367 49 TGTGTGTGTGTGTAGGTATATGCACATGCACATCTGTGTTTTTCTGTGT .....:.............:........::::.x.....x.x.x..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -31298252 -62932150 +3025 chr4 + 190214555 8180826 8180825 8180873 48 TGTGTGTGCATGCATGTATGTGTATGTATATGTGCACATGTATCTGTG chr4 - 94230402 23629639 23629638 23629686 70600717 70600716 70600764 48 TGTGTGTGCATGTCTATATATGTATGTATAGGTGTACATGGACCTACG ............:x.:...:..........x...:.....x.:..::. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -15448813 -78781589 +3178 chr4 + 190214555 8182617 8182616 8182665 49 CACCCTCCGTGCCTCAGTTTCCCCATCTGTAAGATGAGGCATTGGTGTT chr4 - 94230402 45304765 45304764 45304813 48925590 48925589 48925638 49 CATTCTCAGTATCTCAGTCTCCCCATTTGTAAAATGAAGTATTGATGTT ..::...x..::......:.......:.....:....:.:....:.... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -37122148 -57108254 +3257 chr4 + 190214555 8211292 8211291 8211397 106 CCCGTTTTCTCCCTCCTCCCTCCTTCTCCCCCTCCCGGTGTCTCCCCTCTCCCCCTCCTGGTTTCTCC-----CCTCTTCCTTCCTCTCCCCCTCCTGGTTTCTCCCCTCT chr4 - 94230402 93339629 93339628 93339733 890670 890669 890774 105 CCGGCTCCCCCCATCCACTCTCCTCCATCACCTCT-GGTTTCTCCCTGCGCTCTCT-----TTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCT ..x.:.::.:..x...x.:.....:.x:.x....:-...x......:x.x.:.:..-----.......-----.:.........:x.:.:.....:.xx.:.x:....... 35M1D20M5D7M5I38M 70/100 70.0% 105/94230402 0.0% 11/100 11.0% -85128337 -9102065 +3281 chr4 + 190214555 8211301 8211300 8211441 141 TCCCTCCTCCCTCCTTCTCCCCCTCCCGGTGTCTCCCCTCTCCCCCTCCTGGTTTCTCCCCTCTTCCTTCCTCTCCCCCTCCTGGTTTCTCCCCTCTTCCTTCCTCTCCCCCTCCTGGTTTCTCCCCTCTCCCTCCCTCTC chr4 - 94230402 81969972 81969971 81970109 12260294 12260293 12260431 138 TCCCTCCTGGGGCCCTCACTCCTTGC---TGTCCTGCTCCTCTCCCTCCTGGGTGCCATCCTCGCTGGTCTCCTTCTCCTCCTTGCTGCGCTTGTTCTTCTTGTGCTTGTGGCGCCGATGGCTCTCCCCTTCCTCGCTCTC ........xxxx..:..x.:..:.x.---....::x.::...:.........x.x.:x:....x::xx..::..:.:......x.:.x.x.::x.::.:...x:x..:x:xx:x.:.:.xx...:..:..:....x..... 26M3D112M 81/138 58.7% 138/94230402 0.0% 3/138 2.2% -73758671 -20471731 +3211 chr4 + 190214555 8211454 8211453 8211540 87 CACCGTTTTCTCCCTTCTCCCTCCC--TCTCCCCCTCCCGGTGTCTCCCCTCTCCCTGCTCTCCTTCTCCCCTTCTACTCCTCATTCTC chr4 - 94230402 46943477 46943476 46943563 47286840 47286839 47286926 87 CACTGATCCTTCCCTTCCCTCTCCCAATTTCCTTTTCCCTCTGTCTGA--TTTCCCTTCTCTCCTTCTCCCCTTTAAGTTCAAAATCTC ...:.x.:::.......:.:.....--.:...:::....xx.....xx--.:.....x................:x.x.:.xx.x.... 25M2I21M2D39M 61/85 71.8% 87/94230402 0.0% 4/85 4.7% -38732023 -55498379 +3100 chr4 + 190214555 8222360 8222359 8222409 50 GGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGACAAAGTCTTGCTCT chr4 - 94230402 65740999 65740998 65741048 28489355 28489354 28489404 50 GATTTTGTTCTTGTGTTTGTTTTTTTTTTTTTCAAACCAAGTCTTGCTTT .:....x..:..x.x...x...............:..x..........:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -57518639 -36711763 +3803 chr4 + 190214555 8223708 8223707 8223786 79 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCGTGTCTCAGCCTCCCAAGTAGCTGGAACTACAGGCACGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.:.........:.x...x.:x.x........::..................--.::..:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% -9973418 -84256984 +3314 chr4 + 190214555 8239508 8239507 8239575 68 CCAGGCACATGCACACAGGCACACACACAGACATGCACACACACAGGCACATGCACACGCAAATGCAC chr4 - 94230402 90815402 90815401 90815469 3414934 3414933 3415001 68 CCAGGCGAGCTCTTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACAC ......:x::x.x:::.x.:......:...x::........:....:...........::..:::... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -82575894 -11654508 +3217 chr4 + 190214555 8243599 8243598 8243665 67 CTACAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTTTCTAGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .....:..:xx:x..:.::........::x...x.xx.x...........x.........:.:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -9953527 -84276875 +3296 chr4 + 190214555 8249280 8249279 8249356 77 GGCCAATAGGATATATATATATATATATATATATATATATATATACACACAC--ACACACACACATACACACACACACA chr4 - 94230402 8395784 8395783 8395862 85834541 85834540 85834619 79 GGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....xxx.x:...:.:.::...x.:..:...x..:....:...:.x:...:--.:.........:.......x..... 52M2I25M 55/77 71.4% 79/94230402 0.0% 2/77 2.6% -146504 -94083898 +3607 chr4 + 190214555 8249287 8249286 8249376 90 AGGATATATATATATATATATATATATATATATATATACACACACACACACACACATACACACACACACACACACAGACACACAGGTAAA chr4 - 94230402 8395783 8395782 8395872 85834531 85834530 85834620 90 AGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA ...x:..:.:.:...:.:.::...x.:..:...x..:.:.:::.::.x:...:xx...................x.x...x.::::.... 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -146496 -94083906 +3000 chr4 + 190214555 8249290 8249289 8249353 64 ATATATATATATATATATATATATATATATATATACACACACACACACACACATACACACACAC chr4 - 94230402 14964821 14964820 14964884 79265519 79265518 79265582 64 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.x....:.x.:::.:.::.:.::.:...:....:...xx........::..:.......... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -6715531 -87514871 +3115 chr4 + 190214555 8249290 8249289 8249367 78 ATATATATATATATATATATATATATATATATATACACACACACACACA-CACATACACACACACACACACACAGACAC chr4 - 94230402 88147181 88147180 88147259 6083144 6083143 6083222 79 ACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACAC .:..:..x:x..............:.x.:.:...:.:............-..:...:.x:x.x.x:..:.:.:x:.... 49M1I29M 54/78 69.2% 79/94230402 0.0% 1/78 1.3% -79897891 -14332511 +3217 chr4 + 190214555 8249290 8249289 8249348 59 ATATATATATATATATATATATATATATATATATACACACACACACACACACATACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx.:.................x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -146514 -94083888 +3047 chr4 + 190214555 8249292 8249291 8249346 55 ATATATATATATATATATATATATATATATATACACACACACACACACACATACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x..:....:...::x..:..xx...................x.:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -146516 -94083886 +3069 chr4 + 190214555 8249292 8249291 8249357 66 ATATATATATATATATATATATATATATATATACACACACACACACACACATACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...::.:.:...xx.........:............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -6715527 -87514875 +3694 chr4 + 190214555 8249294 8249293 8249368 75 ATATATATATATATATATATATATATATATACACACACACACACACACATACACACACACACACACACAGACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x....:.:::.::.x:...:xx.:....................... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -146494 -94083908 +3526 chr4 + 190214555 8249311 8249310 8249443 133 TATATATATATATACACACACACACACACACATACACACACACACACACACAGACACACAGGTAAATATGTACACTTATACATCATATGCATATATGTTCATACACATAGATACACACACACATACGGAGATT chr4 - 94230402 73121102 73121101 73121217 21109186 21109185 21109301 116 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAAT-----------------ACGCCCACAGAGACACACATGTATAAGCAAATT .:.::..::....x..:.....:.:.....x.x:..::x::...:..::.:..::....::...x..:..x::..x....x..-----------------.::.x..:...x.......:::...x.x.:... 83M17D33M 73/116 62.9% 116/94230402 0.0% 17/116 14.7% -64871791 -29358611 +3415 chr4 + 190214555 8253078 8253077 8253189 112 CCTTCCTCTCCCTCCCTGCCTTCCTC---------TCTCCTTCCTTCTTTCTGCCTCTCCTTCCCTCCTTCTTTCCCCTTTCCCTGCCTCTCTTCTCTCCTTCTATCCTTCCCTTTTCCCT chr4 - 94230402 79652979 79652978 79653099 14577304 14577303 14577424 121 CTTACCCTTCCTTAGCTGTCTTCTTCAACTCTGGCTCATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCT .:.x..::...:.xx...:....:..---------..x:..:x.:.:.:..xx..::..::...:x...x..:.::.xx.....::::.....::..::...:.....:..:.x.:.:... 26M9I86M 68/112 60.7% 121/94230402 0.0% 9/112 8.0% -71399901 -22830501 +3150 chr4 + 190214555 8267337 8267336 8267390 54 GCAGTGCAGGGCGGGAGCAGCAGGGGGCGCGGCTCTCCTGAGGACAGCGCTGGG chr4 - 94230402 92464863 92464862 92464916 1765487 1765486 1765540 54 GCAGAGCAGGCAGGGAGCAGCGGGGCGCGCAGCGCTGCTCGGCACAGCGCTGGG ....x.....xx.........:...x....:..x..x..x:.x........... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -84197526 -10032876 +3514 chr4 + 190214555 8337652 8337651 8337695 44 ACATGCACATGCAACCTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 38293208 38293207 38293251 55937152 55937151 55937195 44 ACATGCAAATGCAACCTTTTTTCCTTTTTTTTTTTTTTCTGAGA .......x..............::..............:..... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% -29955556 -64274846 +3116 chr4 + 190214555 8400246 8400245 8400296 51 ACCTCAATAATAATAATAATAATAATAATAATAATAATAAAAGCATTGTGT chr4 - 94230402 26508913 26508912 26508963 67721440 67721439 67721490 51 ACCTTAATAAAGCTAATAAAGCTAATAGTAATAATAATAAAAGCATTGCAT ....:.....x:x......x:x.....:....................::. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -18108667 -76121735 +3341 chr4 + 190214555 8418862 8418861 8418966 105 AGAAAACAAAACAAACAAACAACAACAACAACAAAAACACAGAAAAATATGGTCAACATCATTAGCCACCAGGAAAATGCAAACCAAAAACCCAATGAGAGACCA chr4 - 94230402 89474250 89474249 89474346 4756057 4756056 4756153 97 AGAGAAAACAACAAACAAACAACAACAACAACAAAAAAACAGTTATGTATGCCTAAAAT-----GGCATAAAAAGAGAGTACAACAAAAG---AGTGACAGAACA ...:..x.x............................x....xx.x:....x::..x..-----.x..:x.::.:.:x.:.x.x.....:---.:...x...x.. 59M5D26M3D12M 70/97 72.2% 97/94230402 0.0% 8/97 8.2% -81055388 -13175014 +3246 chr4 + 190214555 8418869 8418868 8418924 56 AAAACAAACAAACAACAACAACAACAAAAACACAGAAAA---ATATGGTCAACATCATT chr4 - 94230402 86688689 86688688 86688747 7541656 7541655 7541714 59 AAAACAAACAAATAACAACAACAACAAAAACCCACAAAAAATATACTATTAGCAACATT ............:..................x..x....---...:x:.:.:..x.... 39M3I17M 47/56 83.9% 59/94230402 0.0% 3/56 5.4% -78269820 -15960582 +3207 chr4 + 190214555 8449919 8449918 8449976 58 CCCCTTCATGATTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGC chr4 - 94230402 2110797 2110796 2110854 92119549 92119548 92119606 58 CCCGTCCATGGCTTTCTCCTCAATGCCTTTCTTTATTTCTTTTTTTTTTTTTTTTCAC ...x.:....::.....::..xx.x.:.......x...:................::. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 6339122 NA +3212 chr4 + 190214555 8495246 8495245 8495325 80 ACCCCCATGGGGTG--------TTAGTGACCTGATGCCATAGAGGAGAAAACTGAGGCTCAGAGAGGTTAAGTGACTTGCCCAGAATC chr4 - 94230402 10729175 10729174 10729262 83501141 83501140 83501228 88 ACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .....::..:...:--------:..x:::.::x..x::.:..:x.:............x..x.x.........:.:.........:.. 14M8I66M 55/80 68.8% 88/94230402 0.0% 8/80 10.0% -2233929 -91996473 +3016 chr4 + 190214555 8524592 8524591 8524644 53 TCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAATGATTTCTCAACTGGGAC chr4 - 94230402 76023598 76023597 76023650 18206753 18206752 18206805 53 TCAAGAAAAAAAAAAAAAAAAACAAATAAAGCGGACACTTTCTCAGCTGTGGC ....:.................x...x.:..x.:.::x.......:...x.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -67499006 -26731396 +3031 chr4 + 190214555 8540495 8540494 8540572 78 AATCCTCTCAGCAGCCCTGGGAAAGATGGTGGCTATTATCCCCGTCTTACAGAGGAGGAAACTGAGGCACAGAGAGGT chr4 - 94230402 73089417 73089416 73089494 21140909 21140908 21140986 78 AAGTTTCTCAGACTGCCTTCAAAAAATGGGCATTAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGT ..x::......xxxx...xx:...:....xx::..x.:....:..:..::...xx......x..........x..... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -64548922 -29681480 +3297 chr4 + 190214555 8555650 8555649 8555696 47 TGTCTCAAAACAAAAACAAAAA----CAAACAACAACAACAACAAAAAAAA chr4 - 94230402 4027211 4027210 4027261 90203142 90203141 90203192 51 TGTCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA .....:..x.......x.....----......................... 22M4I25M 44/47 93.6% 51/94230402 0.0% 4/47 8.5% 4528439 NA +3086 chr4 + 190214555 8555654 8555653 8555697 44 TCAAAACAAAAACAAAAACAAACAACAACAACAACAAAAAAAAA chr4 - 94230402 18021888 18021887 18021931 76208472 76208471 76208515 44 TCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAA ...:..x..::.x.x............................. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -9466234 -84764168 +3068 chr4 + 190214555 8594861 8594860 8594930 70 CTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCATCTGCCACCGCG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:.......x.:xx...x.xx..........::.:.........:......--.:.x::....:.:. 54M2D14M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% -9602278 -84628124 +3770 chr4 + 190214555 8669853 8669852 8669936 84 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCACGCCTCAGCCACCTGAGTAGCTGGAATTACATGGCGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA---CGTGCACCACTGTG ..:..:..:xx:x..:.............x...x..x.x.......x::::...........:....---..::......::.. 67M3D14M 59/81 72.8% 81/94230402 0.0% 3/81 3.7% -9527273 -84703129 +3095 chr4 + 190214555 8673601 8673600 8673646 46 ACAACAACTACAACAACAACAAAAAAAAAAAAAAAAAAAGAGGGAG chr4 - 94230402 94076884 94076883 94076929 153474 153473 153519 46 ACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAG ...:.:..x....................:.:.:.:.:....:... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -85403283 -8827119 +3003 chr4 + 190214555 8673602 8673601 8673637 36 CAACAACTACAACAACAACAAAAAAAAAAAAAAAAA chr4 - 94230402 29762489 29762488 29762524 64467879 64467878 64467914 36 CAACAACAACAACAACAGCAAAAAAAAAAAAAAAAA .......x.........:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -21088887 -73141515 +3070 chr4 + 190214555 8693137 8693136 8693217 81 ATCTCCCTTCTGTCTGAAGCCTCTCTTTATTGTTTTTTGTTTGTTCGTTTGTTTTTTCTTTTTTGTTTTTTCTGCAGGTCA chr4 - 94230402 89846289 89846288 89846369 4384034 4384033 4384114 81 ACTTCCTGCCTGTTTGAATAGTTTTTTTCTTATTTTTAGGTTACTGAGTTATCTTTTTTTTTTTCTTTTTTCTGGGGATTA .::...:x:....:....xxx.:.:...x..:.....x.x..::.x:x..:.:....:......x.........x:.:.:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -81153152 -13077250 +3286 chr4 + 190214555 8717332 8717331 8717651 320 GAGAACCACCCCTAAGCATGTTACAAGCAAACAACAGAAAAAT---CCAAAAAATAAAAAGA-AAAAAGAAAAGAAAAAATCTTAAAAGCACCAAACGAAAAGTGTACATCACTACAGGGAAGCAACAATAAGAATCAATGATGATGATCTCTCAGCAGATACTATGGAGGCCAGAACATAAGGGCAACATCTTTAAGGAATTGAAAGAGAGAAGAGAAAGAAAGAAGAGAGAGACAGAAAGAAGGAAGGGAAGGGAAGAGAGAAAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAA chr4 - 94230402 72526079 72526078 72526344 21704059 21704058 21704324 266 GAGATCCCCTTCTCAGCA----------ATGCAGCAAAGAAATATTCCAAAACTTGAAAGTATAGAAATACAAAAAATAATTCTGAA-----TAAATGAAGAGAGTAT----------TGATGCAGAGATGAGGGGTAAGATTGATAATTAATCTGT-TATTTTCTTTAGGCG-------------------TTTGAAAAATGGAAAGAGAAAAAAATAGAATATTTGAGAGA------------GCAAGGCAGACAGGAAAAACAGTCTGAAAGAATCAGAAAGAAA-AAAGAAGAGGAACTAGCTGCAAAAAAGAAGAGAGA ....x..x.::..x....----------.x:..:..:.:....---......xx.:...:x.-.:...x.x..:...x...::.:..-----:...:...:..x...:----------x..x...:x:..:..::x:..x:x....:..:xx..x.:-x..x:.x.xx....x-------------------...:.::...x........:..:.:x.::.x.xxx......------------.x.:..x..:x.:..:.:.x..xxx.......xx.:.......-......:..:..xx.:xx.x..:......:...:. 18M10D15M3I16M1I24M5D16M10D39M1D15M19D41M12D43M1D35M 168/262 64.1% 266/94230402 0.0% 62/262 23.7% -63808747 -30421655 +3647 chr4 + 190214555 8717509 8717508 8717688 180 AGGGCAACA-TCTTTAAGGA----ATTGAAAGAGAGAAGAGAAAGAAAGAAGAGAGAGACAGAAAGAAGGAAGGGAAGGGAAGAGAGAAAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 42083983 42083982 42084161 52146242 52146241 52146420 179 AGGGTAATAATCTTATAGGAGCTTATAGCAAAAGGGAGTAGAAGTGGAGAAGAGAGA------AAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAAGCACAAA ....:..:.-....xx....----..x.x..:..:..:x....:x::..........------......:..::.xxx:...:...x.x.x.x:.x:x.x...:::....:x.x.:...xx..x....::.x..x..:.:xx.::x:xx.:..:...:.:....:.:.:....:.:.::x.x... 9M1I10M4I33M6D122M 106/174 60.9% 179/94230402 0.0% 11/174 6.3% -33366474 -60863928 +3276 chr4 + 190214555 8717523 8717522 8717632 110 AAGGAATTGAAAGAGAGAAGA----GAAAGAAAGAAGAGAGAGACAGAAAGAAGGAAGGGAAGGGAAGAGAGAAAGAAAGAAAGAAAAAAAAAG-AAAGAAAGAAAAGAAAGAAA chr4 - 94230402 56098430 56098429 56098541 38131862 38131861 38131973 112 AAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAA---AAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAA ..::.:.:.:.....xx::..----:.x....:...x......x..:....x......::..---..:..::....x....::.:::.......-x....:.:xxx.:..:.... 21M4I37M3D29M1I20M 72/107 67.3% 112/94230402 0.0% 8/107 7.5% -47380907 -46849495 +4000 chr4 + 190214555 8717534 8717533 8717732 199 AGAGAGAAG-----AGAAAGAAAGAAGAGAGAGACAGAAAGAAGGA-----------------AGGGAAGGGAAGAGAGAAAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGGAAA chr4 - 94230402 56098324 56098323 56098541 38131862 38131861 38132079 218 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGG---GAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAA .....x...-----...x..x:.....:..x:..x.x..x:.....-----------------..:..:.x..:.x.:.x..::.......:xxxx:.:..xx:.---.....::xx.:.....xx:.:.xxx...x.:...:..x.:....xx.:....x.:...:..:...:.:::....x.:..:..::.:..::.:xx..:::..xxx.:....... 9M5I32M17I42M3D113M 120/196 61.2% 218/94230402 0.0% 25/196 12.8% -47380790 -46849612 +3743 chr4 + 190214555 8717571 8717570 8717728 158 AGGAAGGGAAGGGAAGAGAGAAAGAAA-GAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGA----------AAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGA--AAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAG--AAAGAAAGAAG chr4 - 94230402 90814934 90814933 90815104 3415299 3415298 3415469 171 AGCAAAGGGTGGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAG--AATAGGAAAGGAAAGACAGCTCCAGAAAGAAG ..x..:..:x...:.......:...::-.::.x:::xx.x::..:...:.x......:...x.:.......----------.....:::.x.:...xx:..x..:..x:x::..:...x.:..--.:...x....:...--.:x.:.:.........x..--xx......... 27M1I43M10I42M2I14M2D19M2I11M 103/156 66.0% 171/94230402 0.0% 17/156 10.9% -82097363 -12133039 +3246 chr4 + 190214555 8717576 8717575 8717652 77 GGGAAGGGAAGAGAGAAAGAAAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAA chr4 - 94230402 27736738 27736737 27736814 66493589 66493588 66493665 77 GGGAAGGGAAGGGAGGATGGAAGAAAAAAAAAAATACAATACAAAAACCGAAAAATTAAAAACGAAAAATAGCAAAA ...........:...:.x.:......:.......x.x..x:x..:..xx....:.xx:.:..x....:.x.:x.... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -19019162 -75211240 +3211 chr4 + 190214555 8717596 8717595 8717718 123 AAGAAAGAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAA--------AGAAGGA-------------AGGAAGGAAGGAAAGAAAGA chr4 - 94230402 67445498 67445497 67445641 26784762 26784761 26784905 144 AAAAAGAGAACATAAAGAAAGAAAGAGAGGAAAGGAGGATAATACAGCTCAGTAGGAGAAATAAAAAAAAATGGAGAAACATTAAGCAGAATAAAACTGTCGCCAGGAGCAGATGCACTATTAGAGGAGGAAAGACAAGAAAGA ..:..:::..x.x.............:.:.....:.:..x..x:x.:xxx.:x.::.....x...:.:...x::.....x.xx...x.::.x.:..--------..:..x.-------------....:.:...:x........ 96M8I7M13I20M 81/123 65.9% 144/94230402 0.0% 21/123 17.1% -58727902 -35502500 +3722 chr4 + 190214555 8717607 8717606 8717709 103 AAAAAGAAAGAAAGAA----AAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAA--------------AGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGG chr4 - 94230402 22228855 22228854 22228975 72001428 72001427 72001548 121 AAAAGGAAAAAAAAAATCTCACAAAAGCAAATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGG ....:....:...:..----.x:....x..:x.....:x...x::.:.::.x.--------------....:......:...:.....:.:.....:...:.x..:::.x..:.:...... 16M4I33M14I54M 72/103 69.9% 121/94230402 0.0% 18/103 17.5% -13511248 -80719154 +3681 chr4 + 190214555 8717608 8717607 8717709 102 AAAAGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAG--AAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGG chr4 - 94230402 10903375 10903374 10903475 83326928 83326927 83327028 101 AGAAAGGAGAAAGAAAAGACAGAAA---AATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAATGTGGG .:..:::............x.....---..x.x.....x...:xx...x...............:::.--.:.....x.:.:.x::x...x:......x.x:.. 25M3D40M2I34M 71/99 71.7% 101/94230402 0.0% 5/99 5.1% -2185767 -92044635 +3687 chr4 + 190214555 8717621 8717620 8717766 146 AAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAA---GAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGA------AAGAAGGAAGGAAGGAAGGAAAGAAA---GAAAGAAAGA-----AGGAAAGAAAGAAAGAGAGGAAGGGAAAGA------AAGAAAGAAG chr4 - 94230402 90814937 90814936 90815104 3415299 3415298 3415466 168 AAAGGGTGGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACA-AAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGACAGCTCCAGAAAGAAG ...:.:x:.::.....:...:..:x::..x::.xx.---..:.....x.-.....:...x.........:::.------.........x:::::xx.:.x..:..---.....:..x.-----.....x....:..::.x.....:.......------x......... 36M3I10M1D23M6I26M3I10M5I30M6I10M 101/145 69.7% 168/94230402 0.0% 24/145 16.6% -82097316 -12133086 +3916 chr4 + 190214555 8717626 8717625 8717741 116 AAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAGA--GAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAA-----AGAAGGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...:..:.............:::..:.......--.x:.:....x..:::xxx:.:.x.....xx...:x.::::.:x:......:.....:.:..-----::.....:..:..x.... 37M2I61M5I18M 77/116 66.4% 123/94230402 0.0% 7/116 6.0% -21815538 -72414864 +3398 chr4 + 190214555 8717698 8717697 8717784 87 AAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAG------AGAGGAAGGGAAAGAAAGAA--AGAAGAGACAAAGAAAGAAGAAA chr4 - 94230402 45628604 45628603 45628698 48601705 48601704 48601799 95 AAAAAAAGGGGGATGAGAAAAAAAATAGGAAAAAAAAAAGAAAGTATCTTAAATAAAGGGAAAAAGAGAACTGGAAGAATCAAAGGATGAAGAAA ..::..:.::...x:::..:...:.x..:.::...:........------.:.x:........:.:....--:.....:x.....:.x....... 44M6I20M2I23M 61/87 70.1% 95/94230402 0.0% 8/87 9.2% -36910906 -57319496 +3771 chr4 + 190214555 8717710 8717709 8717780 71 AAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAGGAAGGGAAAGAAAGAAAGAAGAGACAAAGAAAGAA chr4 - 94230402 25066985 25066984 25067055 69163348 69163347 69163418 71 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA .....x...x....::..x:.x...:..x::...x:......:..:..........:...:..::...... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -16349275 -77881127 +3619 chr4 + 190214555 8746744 8746743 8746861 118 CATGTGCACACACATTCATACACACATGCGCAGGCACACACATTCACACACACAGGTGCAGGCACACACATTCATACACACATGTGCAGGCACACACATTCACACACAGGTGCAGGCA chr4 - 94230402 73121100 73121099 73121213 21109190 21109189 21109303 114 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAAT----ACGCCCACAGAGACACACATGTATAAGCA .:......::..:...........:..:.:...:x:..::x:.x..:..::.:....:..x.x::.:.::.xx:....:.:.x:.----:.:.x....xxx.......x..::.:... 85M4D29M 70/114 61.4% 114/94230402 0.0% 4/114 3.5% -64374356 -29856046 +3550 chr4 + 190214555 8746818 8746817 8746951 134 TACACACATGTGCAGGCACACACATTCACACACAGGTGCAGGCACACACATTCATACACACATGTGCACACACATTCATACAGGTGCAGGTACACACATACATGCACACATG---------TGCACACATATTCATACACACA chr4 - 94230402 89016085 89016084 89016227 5214176 5214175 5214318 143 TGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCA .:.......x....x.........:x:x::.:..x:::..x...x.::...x..:::.x.::....::..x...:.::::..x:::.:.:.:.:::.x:.::x......x..---------..::.x.....:..:..x.x.. 112M9I22M 78/134 58.2% 143/94230402 0.0% 9/134 6.7% -80269267 -13961135 +4347 chr4 + 190214555 8758766 8758765 8758991 226 TATATATTTATATATTTATATGTTTTTATATATTTATATATATTTATGGTTTTATATATTTATATATTTATATATTTTTATATATTTATTTATATATTTATATATATTTATATATTTTTATATTTTTA----TATATTTATATATATTTTTATATATTTATATATATTTATATATTTATATATATTTATATATTTATATATATT------TATATATTTATATATATTTATATATT chr4 - 94230402 49089519 49089518 49089738 45140665 45140664 45140884 220 TACATACTAAT---TCTATCTTTCTTAAAGCATTTTTATATAATGAAGCGTTCTTATTTTTGTCTAT--GTGTATTTTTATATGTCTATTTATATGTTTATATTTACC--TATGCTTTGAAATCTGCGTGCTTGTGTTTATTTGCAGTATTACACATTTAAACAAATGCATTTA---------ATGCATCTATTTGAATGTGATGCATCGCATACATGTGTGAACATTAATGTTTT ..:...:.x..---.:...x.x.:..x.x::....x......x.x.x.xx..:x...x...:.x...--:.:...........:.:.........:.......x..::--...::...x.x..:.x::----.:.:.....x.::.x.x...:.:.....x.:.x..x:..x..---------..x:..x.....:x..:.:x.------:...:..x.:.:x.:...x..:.x.. 11M3D53M2D39M2D18M4I42M9D21M6I26M 139/210 66.2% 220/94230402 0.0% 26/210 12.4% -40330753 -53899649 +3072 chr4 + 190214555 8790991 8790990 8791060 70 ACACACACATACACACACAGGTACACATGCACACACAGCACACAGGTGCACACACATACACACACAGAGG chr4 - 94230402 33416718 33416717 33416787 60813616 60813615 60813685 70 ACACACACATACACACACAAGGACACACTGAGACACAGAAGACCTGACTACACCCCTACACAGAATGAGG ...................:.x.....:xx.x......x.x..xx.xx:....x.x......x.xx.... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% -24625727 -69604675 +3811 chr4 + 190214555 8792588 8792587 8792733 146 GGACACACACACAGGGAGACGCACACACACGTTCACACACACAGAGGGAGGCGCGCACACACATGGAAACCCACACACACATGCACACACACACAGAGACGCACACACGTGCACACACACACAGAGGGAGATGCACACACACACAC chr4 - 94230402 89016080 89016079 89016222 5214181 5214180 5214323 143 GGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAA--ATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTG-TGCCCATATCCACAC ...::::......xxx:x.:.............::.:......x.x.x.:--::...:....:.:..x::x::::..x...:x::.:.......:..x:..::.x..:.x......x::...x.xx.xx.-...x..:.:x..... 50M2D78M1D15M 87/143 60.8% 143/94230402 0.0% 3/143 2.1% -80223492 -14006910 +9236 chr4 + 190214555 8867710 8867709 8868342 633 TCTGCG---CCCGCAGAAAGGGCACGGAGGCGGC--GGCCGGGAAGGC-GGCCAGCGGGTAGGCGAGGGCC----------CCGGAGAAGCCGAGCAGCGGTGGGGGCGGCGCGGGCGCGGCGGGC-GCCAGCGGGAAGGGCAGGGTGGCCGGGGGCCCAGCGGCGGCTGCGGCCGGGGGGCTTTCGTGGTAGAGCACCGGCACGCGGACCAGGCGCTGCGCTCCCGGCGGGGACAGGCTGGCCGCCTCCAGC-------------TCGGCTGCCAG---CTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAGATCTTAACCTGCGTCTCGGTGAGCTGCAGGGAGGCGGCCAGGCCGGCGCGCTCG-GCGCTGCTCAGGTAGCGCTTCAGGTCGAAGGTGGATTCCAGCTGGAAGACCTGGCTGCGGGAGAAGACTGTGCGCGT---------------------------------------CTTCTTCTT--------TCGGCCGCCGCCCACGCCAACGCCGCCG-------CGTGTCTCCC---------------------------------CAGCCGCCGCAGGGACCTCGGCCAGCTCCGA---CGCCTCCTCCGTGCCG---GCCGCCGGGCCACGCGCCGCCAGCTCCGCTGCCTCCCGCTGCACCGCTCCCGGCCCGGGGCCTCGCGGCCAGGCGCCCTCCGCACGGCCCATCTCCTCGCCCGTCTCCGGTGAGTCCCGGTCGC chr4 - 94230402 6788318 6788317 6789043 87441360 87441359 87442085 726 TCTGCGAGCCCAGCACGAAGGGCGAGAGGACGGCTGGGCTGGGCAGGAAGGGCAGCTGGGCGGCGCACACCAACCCCCCGGCCGGGTGACCCGCGTAGCTGCCGGGCCCGTGCATGGACAGCGGGTTGCCCATGGG----------CGGCGAGTGGCTGAGCGG--GCTGAGGccg---------cccggcagcgcccctccgc------ccagcgccccgcccgccccgccgcccgccccgccgccgccGGTGGGCGCGCTGGTGTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGAGCGCCAGGTTGAGGCGCTCGCACACCGA-CAGGTACCGCGTGGACTTGAACTTGTTCTCCAGCGCCACCAGCTGCTCGTAGGTGAAAGCTGTCCGCGCCCGCCGGGGTTTGCCCGACTTGGAGTCCGAGCCCGTGCGCTTCCTCTTGGGCTTGGCCTGCTGCTGCCCTCCGCCGGGCTGCTGGggcggcggcggctgctggggcggcggcggcgggggcggcggAGGGCCGACGGCCGCCTCGGGAGCCTCGGAGTGCTGCGGGCCCGCCTCGGCCTCGCCGGGAGCCGCCGAGC----CGCTGCCGGTGCTGCCG-CTGCTGCTGCTCTCCTCGCTGCACAGCTCCTCGTCGTCCTGCAGCTCGCTGTCGGGGCTGCGGCTCGGCCGGCTGCTGT-AGTCCAGGTCGC ......---..x...x:......:x.::.:....--...:...x...x-..x....x..xx....x:x:..----------....:x:.x...x.:...x.:x...x.x.:..:x.x:.:.....:-...x::...----------:...x:.x...:x.....--....x.....---------.x:..:..x..x..xx.:.------.x:....:x...:.x.xx..xx.x.x.x.:x......x..:.:-------------.....xx..:.---....:x..........x.........................x.................x:xx..x...:xx......::.:x.......-:.:.:.x-......x...x.x::x.:...xx..xx:......xxx.xx.x...x::.::..x...::....x....:---------------------------------------....:....--------:.x..:..:....x.xx.x:x..:..:.-------x.:.x..x.:---------------------------------.:......x.:..::......xxx...x..:---......xx..x:....---.......:..----...:...:.:x.:..:.-..x.:.....x.:x...x.x..x.:.xx.....:x.:.xx..:x.::x.xxx...xx.xx.xx....x...x..x.x..-.....x...... 6M3I25M2I12M1I22M10I45M1I9M10D18M2D10M9D19M6D43M13I11M3I91M1I7M1D69M39I9M8I28M7I10M33I31M3I16M3I10M4D17M1D79M1D12M 401/599 66.9% 726/94230402 0.0% 161/599 26.9% 2079392 NA +7512 chr4 + 190214555 8867804 8867803 8868133 330 CGCGGGCGCGGCGGGC------GCCAGCGGGAAGGGCAGGGTGGCCGGGGGCCCAG----------CGGCGGCTGCGGCCGGGGGGCTTTCGTGGTAGAGCACCGGCACGCGGA--CCAGGCGCTGCGCTCCCGGCGGGGACAGG---CTGGCCGCC------------TCCAGCTCGGCTGCCAGCTGCCGCTTCCACTTGTTGCGGCGGTTCTGGAACCAGATCTTAACCTGCGTCTCGGTGAGCTGCAGGGAGGCGGCCAGGCCGGCGCGCTCGGCGCTGCTCAGGTAGCGCTTCAGGTCGAAGGTGGATTCCAGCTGGAAGACCTGGCTGCGGGAGAAGACTGTGCGCGTCTTCTTCTT chr4 - 94230402 12453517 12453516 12453855 81776548 81776547 81776886 339 CACAGGGGCCACGGGCAGCCCCGCTCGCTGGAAGGG-------GCTGGAGGCTCCGTACAGGGATGCGCCGGCCACTGCTGGGCCGCC------------CAACGGGAAGGAGATGCCGAATGCAGCA-----GGCGGGAGCATGGGCTTGGCTGCCATCTTCAGCTTCTCCAGCTCGGCCTCCTGCAGCCGCTTGGCCTTGGCGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGCTGGAGAACTCGGCACGCTCAGCGATGGACAGGTACTGCTTCTGGCGGAATTTCCTCTCCAGGGCCAGCAGCTGGGCCGTGGTGAAGGGCGTCCGGGGCTTCCTGTT .:.:..x..x:.....------..:x..x.......-------..:..:...:.x.----------..x....::.x..:...xx..:------------..x...x.x.x:..--..::::..x..:-----......::..x.---:....:...------------...........:x..x..x.......xxx....x:........................x.................x:xx..x...x:..xx.:x:....:.....:...x..xx......x:.....x..:x...xx.xxx:.....xxxx.:x.x....x:xxx..x....:x:..x..x.x....:.x.. 16M6I14M7D13M10I22M12D14M2I12M5D12M3I9M12I194M 211/306 69.0% 339/94230402 0.0% 57/306 18.6% -3585713 -90644689 +3023 chr4 + 190214555 8877472 8877471 8877511 40 GAGGGAGAGAGGGAAGGGAAGGGGAAGTGTGCAGGAGGGA chr4 - 94230402 87619580 87619579 87619619 6610784 6610783 6610823 40 GAAGGAGGGGGAGAAGGGAAGGGGGAGAGTGCAGGAGGGA ..:....:.:.:............:..x............ 40M 34/40 85.0% 40/94230402 0.0% 0/40 0.0% -78742108 -15488294 +4567 chr4 + 190214555 8918949 8918948 8919266 318 TTCCTTTCTCATTCTTCTTTTTCTTTCTTTCTCTTTC--TTTCTTTCTTGCTTGCTTGCTTGCTTT--CTTTCTTCTTTCTTTCCCTCCCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTT-------TCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTCTCT---CTCTT-------------TCATTCT-TTCTTTCTCTCTCT-TTCTTTCGAGATGGAGTCTTGCT chr4 - 94230402 69435799 69435798 69436141 24794262 24794261 24794604 343 TCCCATTTACATTCATCCCTTTTTTTTTTTTTTTTTAAACTTCTTCCCCACTAA---GCATGTTTTACCCTTCCACAGTCTTAGTATATCTAGCCTCCCTTCTGTACCCATATTAGTTTTTGCTTCTTCCCACTTAATAATGTTGGCCTGCCTACCCTTCAAGCTCCTCTTATTCTTTCTTGTTTCTTTTTAACCCTAATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGG-GTCTTACT .:..x..:x.....x..::...:...:...:.:...x--:.....:.:::..x:---..x..:...--.:...:x.xx....xx:x.x:..xx.:...:.:..x.x:.:x.x..xx:...:x:.::...::x...-------.:xx:..x:..x:.:.::xxx:.:..:.:x.........x..::..:..xx::..xx:.x.:.xx.x:....:.:.x:.x::x.:..:.xx::x...:.:.x.x...:..:..x.x:....:.:x.......:.....---.....-------------...:...-..:.....:....:-:.......x:....-.....:.. 37M2I15M3D9M2I67M7I138M3I5M13I7M1I14M1I14M1D8M 188/314 59.9% 343/94230402 0.0% 33/314 10.5% -60516850 -33713552 +3699 chr4 + 190214555 8918966 8918965 8919118 153 TTTTTCTTTCTT--TCTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTTCTTTCTTCT---TTCTTTCCCTCCCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTT chr4 - 94230402 9693685 9693684 9693835 84536568 84536567 84536718 151 TTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTA-------TCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ....x.:.....--......:..::.xx..::x::..:..:-------.......::.---.x...:xx..x.:xx::..x..x.x.xx..::...:....::.:.::....:..::.:x...:..x.:...x..x...:.........:.:.::... 12M2I27M7D10M3I97M 92/146 63.0% 151/94230402 0.0% 12/146 8.2% -774719 -93455683 +3034 chr4 + 190214555 8919002 8919001 8919152 151 TTGCTTGCTTTCTTTCTTCTTTCTTTCCCTCCCTCCCTTCCTTCCTTTCTCTTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCT-TTCTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTTTC chr4 - 94230402 60352828 60352827 60352979 33877424 33877423 33877575 152 TTCCTTTCTGGATTTTTTCCATTTCTCCCTCCTGCCTTTGCACTGTTTGTCTTCTTCCTTGGTATTTTTGTTATTTATGTTGTTATCAATATTTCCTAATTCATTTTCTTCTGTTAGTTTCAATTGTTATTCCTTTTTTTTTTTTTTACTTC ..x...x..xxx...:...:x.:.:.......:x..:..x.x::x...x....::.:..:xx.x...:.x.:x..:x.x:.x.:x.:xx.x:...:.xx..:x...:.....-..xx...:xx..x..x:.:....:...:..:...x:... 112M1I39M 89/151 58.9% 152/94230402 0.0% 1/151 0.7% -51433826 -42796576 +3602 chr4 + 190214555 8919126 8919125 8919237 112 CTTCCTTCTTTCTTTCTTC---------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.....:...x.x....---------.::..:::....:..:...:.:...:x.::..:x.x..:.x..::xx:.:.----:.:.x........:............x.x::.::........ 19M9I51M4I42M 74/112 66.1% 125/94230402 0.0% 13/112 11.6% -34162774 -60067628 +3028 chr4 + 190214555 8919153 8919152 8919237 85 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTCTCTCTCTCTTTCATTCTTTCTTTCT chr4 - 94230402 41570552 41570551 41570636 52659767 52659766 52659851 85 TTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCT ...:x..:x..x.:::.:.x:..:...:...............xx..:x:x.xx::.x....::.:..:.xx............. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -32651399 -61579003 +3111 chr4 + 190214555 8934561 8934560 8934623 63 CTCCATCTCAGAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATGAAAGAAAAGCAGGCTATGTG chr4 - 94230402 49250037 49250036 49250099 44980304 44980303 44980366 63 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATG ..:....::.xx.........:..........:..:x....x:.:.:...:.x....:.x:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -40315476 -53914926 +3203 chr4 + 190214555 8937549 8937548 8937597 49 TGCAAAAAAAAAAAAAAAAAAGAGAGAGAGACAGAAAAAAACATATTTG chr4 - 94230402 87676343 87676342 87676391 6554012 6554011 6554060 49 TACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTG .:.x...............:...........x...:..x....x..:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -78738794 -15491608 +7162 chr4 + 190214555 8945013 8945012 8945685 673 CTGCCCTGCTAGTACAAGAAGCAAATAAGCTGACTCTTGGGCGAAACCTGAACATAAAGGCCTCCCGTGCTGTGGTGGCTTTAATGAATACTAAAGGACATCATTGGCTAACGAATGCCAGACTCACTAAGTACCAGACTTGGCTCTGTGAAAATTCCCGTATAACCATTGAAGTTTGTAACAGCCTACACCC-----CTCTACCTTGTGTCCCGTATCAGAGAGCCCTGTTGAGCCTTATTGTGTAGAAGTGTTGGACTCAGTTGACTCTAGCAGACCTGACCTCCGGGACCAGGCTTGGGCATCAGTAGAG-------TGGGAACTATACGTGGACGGGAGCAGCTTCTTCAACCTCCAAGGAGAGAGAGGTGCAGGGTATGCAGTGATAACCCTGGGCACTGTTGTTGAAGCCAGATCGTTGCCCCAGGCCACTTCAGCCCAGAAAGCTGAACTCATTGCTTTCATTCTGGCCTTAGAGCTCAGTGAGGGTGAGACTGTCAACATTTACACTGATTCTCGGTATGTCTTTTCAACCCTTCAAGTGCATGGAGCGTGATAGAAAGAAAAGCGCCTATTGAACTCTGGGGGAAAAGACAGAAAATATCCACAAGAAATCTTGCAATGATTAGAAGCAGTATGGAAACCCCACAAGGTGGCAGTTAGGCATTGCAAGGGACACCA chr4 - 94230402 58495750 58495749 58496414 35733989 35733988 35734653 665 CTGTGCTGTTAATATAAGAGGCAAGAAAACTGACCTTGGGACTGAACATTACTGTTAGCGTACCACATGCGGTTGCAGCGGTGCTGGAGCAGAAAGGACACTATTGGTTATTCCTAAGCAGGATGGCGCAATACGAAGCAGTACTGCTTGAACAAGAGGATACAGCAAGGGAAGCGTCCAGTGCCCCAAATCCAGAATCATTATCTT------TACATGAAAGAGAACTG----GCACGATTGTTTACAAACTATCCAACAGGTGTACTCCACCTATCTgaacctgaagg-------ttactccttaacagaatcccagctgggagctgtttactgatggatgcagctctgctg---tgaaaggagaacagaaggctgggtacaccactgtcagtctacaagaggaaacagaggcaaaactgctagcagtgaacacatctgctcagaaagcttaattaattgctttaactcgagccctggaactatcagaaggaaagtgggctcaggtctatactgactcaaaatatgcttttggaataatacaagctcatggtgcaatctagaaagaaagatgactgttatcttcccaaggaaaTCCTATAAATTATAGTACAGAGATTATGAAATTACTTCAAGCAGTTAATAAACCTAAAGAAATAGCAGTGATACACTGCAAAGCCCATCA ...:x...:..:..:....:....:x..:.....::.x..:.x:...x.x.x::.x.:x.:x:.x.:...x..x.::..xx.:x..:.xxxx........::.....:..x:xxxx:x...:x.x:.xx.:...x.::.xxx:..x:x....x.xxxxx:..:.:.x.xx....:x.x:.:::x..:.x.:..-----.x:..:...------:::..x.:....xx...----..x:x.....x..x..::xx.xx.x:x:..xx....:.x.x:x.:x:....xx:..-------..:xx.x.:.::...:-------.....:..:.x:::x..:..:x......::x:::---.xx.......:x::::x..x.....::.x::x:.x.x:..:x:x:xx.xx::x..:..x.:.::.:.:x.xxx.:x...x..x..:.........x..:.x........x.:..x:...:.:..:..xxxx..:..x:..xxx.::x.x:.:..:.....:..xx::....::...xx..:xx.x....:x.....x..:xxx..........:::.x..:..:xx:..:x::.....xxx:.x...x...xxxxx...:..:x..x...x.:.xx.......xx:x.....:x.x:.::.:.....x.x:..:.....:.xx..:.. 193M5I9M6D17M4D56M7D16M7I34M3D328M 353/653 54.1% 665/94230402 0.0% 32/653 4.9% -49550737 -44679665 +3087 chr4 + 190214555 8954385 8954384 8954435 51 AAAACAAAGTCAAACGAACAAACAAAACCAAAAAACAAACAAACAAAAAAA chr4 - 94230402 25718780 25718779 25718830 68511573 68511572 68511623 51 AAAACAAAACCAAACAAACAAACAAAACCAGAATACCACCACACACAGAAA ........::.....:..............:..x..x.x..x...x.:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -16764395 -77466007 +3725 chr4 + 190214555 9018486 9018485 9018559 74 CTGCAGCCTTGACCTTCTGGGCTCAGGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x........:...:...x.:.x.xx:x........::::.........:...:..x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -9178640 -85051762 +3434 chr4 + 190214555 9040580 9040579 9040652 73 GTATACATATATACGTATATATGTATATACATATATATGT--------ATATACATACACACACACAGATATACATATATA chr4 - 94230402 8395790 8395789 8395870 85834533 85834532 85834613 81 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.::..:.:.:.:..x.:......x.......:....:--------...:...:.............:.:.x..:x... 40M8I33M 54/73 74.0% 81/94230402 0.0% 8/73 11.0% 644790 NA +3119 chr4 + 190214555 9040602 9040601 9040662 61 GTATATACATATATATGTATATACATACACACACACAGATATACATATATACATATATATA chr4 - 94230402 79214675 79214674 79214735 15015668 15015667 15015728 61 GTTTATAGGTTTCTATGCATATGCATACACACCCACACATATACATACATGCTTAAATTTA ..x....x:.x.x....:....:.........x....x.........:..:.x..x..x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -70174073 -24056329 +3634 chr4 + 190214555 9040830 9040829 9040957 128 GTATATATACATATATATACATATATACATATATACGTGCATATATACATATATACGTGCATATATACATATATACGTGCATATATACATATATACATATATACATATATACGTGTATATATACATAT chr4 - 94230402 73121101 73121100 73121224 21109179 21109178 21109302 124 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATA----GGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT ..:.::..:.....x:.....:.......:.x.x:.:..x:..:....:....----x.:.:.::x::....:.:x..:......x.:.:::x:...x.x.:...:..:..::x.:.x..x.x.x... 53M4D71M 76/124 61.3% 124/94230402 0.0% 4/124 3.2% -64080271 -30150131 +3002 chr4 + 190214555 9040907 9040906 9040968 62 TGCATATATACATATATACATATATACATATATACGTGTATATATACATATATACATATATA chr4 - 94230402 32959562 32959561 32959623 61270780 61270779 61270841 62 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATA ....xx.:.::.:x.......:x:.::x.:.:......::................x..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -23918655 -70311747 +3028 chr4 + 190214555 9040990 9040989 9041055 66 GTGTATATATACATATATACATATATACGTGTATATATACATATATACGTATACATATATACGTGT chr4 - 94230402 32959569 32959568 32959634 61270769 61270768 61270834 66 GTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .....:x.......:x:.::x.:.:......::...............:x...:..x:..:xx... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -23918579 -70311823 +3877 chr4 + 190214555 9041201 9041200 9041341 141 TGTATACATATATATACACATATATATACATATATACGTATATGTATACATATATATACACATATATACATATATACGTATATGTATACATATATATACACATATATATACATATATATGT-TTTTTTTTTCTTTTTGAGAT chr4 - 94230402 73121092 73121091 73121233 21109170 21109169 21109311 142 TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGAT ....xx.x::.:.::.::.....x:.....:......::.x.x.:..:x:..:...:::.:.x:..:..:x:....:..:x:.::...:.x...:::x....x.x.:.:....:....x.:-xx...::..x.....x.... 121M1I20M 84/141 59.6% 142/94230402 0.0% 1/141 0.7% -64079891 -30150511 +3034 chr4 + 190214555 9056865 9056864 9056915 51 CTCAAAAAAAAAACAAAAAAACAAAAAACACACACACACACACACACAAAC chr4 - 94230402 31707640 31707639 31707690 62522713 62522712 62522763 51 CTTAAAAAATAAACAAAACAACAAAAAAAAAAAACCAACACATACACAAAC ..:......x........x.........x.x.x..xx.....:........ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -22650775 -71579627 +3070 chr4 + 190214555 9056869 9056868 9056914 46 AAAAAAAAACAAAAAAACAAAAAACACACACACACACACACACAAA chr4 - 94230402 52796033 52796032 52796078 41434325 41434324 41434370 46 AAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAA ...x..x..........x.:.:..x.......:............. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -43739164 -50491238 +3242 chr4 + 190214555 9140461 9140460 9140538 78 TATATATGTATGTGTATATATACACATATATACATGTATGTGTATATATACACATATATACATGTATGTGTATATATG chr4 - 94230402 48167038 48167037 48167114 46063289 46063288 46063365 77 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG-GTAAATGTG .:.....:.xxx::.....:..:.:.x.:.......x.::...::x:........:..:.........-...x..:.. 68M1D9M 54/77 70.1% 77/94230402 0.0% 1/77 1.3% -39026577 -55203825 +3041 chr4 + 190214555 9140533 9140532 9140603 71 TATATGTATACATATGCACATATATATACATGTACATGTGTATGTGTGTGTATATATATATATGTGTATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::..:..:.....:....:.:.x...:.::..:x.x......::.....x.::..:.:x..:...:.:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -62489602 -31740800 +3265 chr4 + 190214555 9193645 9193644 9193765 121 CAAAAAAAA----AAAAAAAAGGAAGAAAGAAAAGAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 25255596 25255595 25255720 68974683 68974682 68974807 125 CAAAAGAAGCTGCAAAAATTAGAACAGATGGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGTAGA .....:..:----.....xx..:.x::.x.::....x.::.....x.::.:.x.x.::..:.xx...x::.:.....x.x:...:...:....:...:.::..xx...::.x.....::.:x.:. 9M4I112M 73/121 60.3% 125/94230402 0.0% 4/121 3.3% -16061951 -78168451 +3557 chr4 + 190214555 9193649 9193648 9193776 128 AAAAAAAAAAAAAGGAAGAAAGAAAAGAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 56332131 56332130 56332256 37898147 37898146 37898272 126 AAAATAAAATAAAAAGAGACAGTGACAAGAAAGCATCAAAGAAATAACAGTCCCTACAAGAACAGAATCAAAATAGGAGATAAATGAAAGATAGAAACAAAGAA--AAAGAAAAGCAGACAGAAGTAA ....x....x...:::...x..x:.x:......x.xx.....x.x..x::xxxxx.x...:.x....xx...:x.:..:.x...x......x.....x......--.......::x...x....:x.. 104M2D22M 84/126 66.7% 126/94230402 0.0% 2/126 1.6% -47138482 -47091920 +4330 chr4 + 190214555 9193653 9193652 9193778 126 AAAAAAAAAGGAAGAAAGAAAAGAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAG-GGGAGAGAAAGACTGTGAAAAAGTA--AAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.....................-::..:........x.x:.:....x.--....xxx:.::x.....xx....x.:.....x..:::...:..:::..:.x.xx:::..:..:..:..x.... 25M1D25M2D73M 84/123 68.3% 123/94230402 0.0% 3/123 2.4% -21339511 -72890891 +3189 chr4 + 190214555 9193718 9193717 9193821 104 AAAGAAA--GAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGCATTAAAG chr4 - 94230402 65901806 65901805 65901911 28328492 28328491 28328597 106 AAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAG ......:--:...x.::x...:....x..:x:.:x.:::..x.x...:......:...xx..::x:..:.....:.:x....x:..x.....xx...:...x.... 7M2I97M 67/104 64.4% 106/94230402 0.0% 2/104 1.9% -56708088 -37522314 +3113 chr4 + 190214555 9197480 9197479 9197515 36 CCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAA chr4 - 94230402 87676345 87676344 87676380 6554023 6554022 6554058 36 CCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .................:.:................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -78478865 -15751537 +3124 chr4 + 190214555 9197482 9197481 9197533 52 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGTGAAAGAAAA chr4 - 94230402 22228922 22228921 22228973 72001430 72001429 72001481 52 AGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAA .:..::.:...................:.:.:...x..:....::...::.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -13031440 -81198962 +3055 chr4 + 190214555 9416954 9416953 9416998 45 TTCCATGTGCCATACTTTCTTCAGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50865330 50865329 50865374 43365029 43365028 43365073 45 TCCCATGTGCTATATTTTAGTCAGTTGCTTTTTTTTTTTTTTTTT .:........:...:...xx......x:................. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -41448376 -52782026 +8081 chr4 + 190214555 9478952 9478951 9479624 673 CTGCCCTGCTAGTACAAGAAGCAAATAAGCTGACTCTTGGGCAGAACCTGAACATAAAGGCCTCCCATGCTGTGGTGACTTTAATGAATGCTAAAGGACATCACTGGCTAATGAATGCCAGACTCACCAAGTACCAAAGTTGGCTCTGTGAAAATCCCCATATAACCATTGAAGTTTGTAACAGCCTACACCCCGCCACCTTGCTCCCGCTATCAGAGAGCCCTGTCGAGCCTGATTGTGTAGAAGTGTTGGACTCAATTGACTCTAGCAGACCTGACCTCCGGGACCAGGCTTGGGCATCAGTAGA-------CTGGGAACTATACGTGGATGGGAGCAGCTT--CTTCAATCCCTAAGGAGAGAGAGGTGCAGGGTATGCAGTGATAACCCTGGACACTGTTGTTGAAGCCAGATCGTTGCCCCAGGCCACTTCAACCCAGAAAGCTGAACTCATTGCTTTCATTCGGGCCTTAGAACTCAGTGAGGGTGAGACTGTCAACATTTACACTGATTCTCGGTATGTCTTTTCAACCTTTCAAGTGCATGGAGCATGATAGAAAGAAAAGGGCCTATTGAACTCTGGGGGAAAAGACAGAAAATGTCAACAAGAAATCTTGCAATGATTAGAAGCAGTATGGAAACCCCACAAGGTGGCAGTTACGCATTGCAGAGGACACCA chr4 - 94230402 58495750 58495749 58496414 35733989 35733988 35734653 665 CTGTGCTGTTAATATAAGAGGCAAGAAAACTGACCTTGGGACTGAACATTACTGTTAGCGTACCACATGCGGTTGCAGCGGTGCTGGAGCAGAAAGGACACTATTGGTTATTCCTAAGCAGGATGGCGCAATACGAAGCAGTACTGCTTGAACAAGAGGATACAGCAAGGGAAGCGTCCAGTGCCCCAAATCCAGAATCATTATCTTTAC-ATGAAAGAGAACTG----GCACGATTGTTTACAAACTATCCAACAGGTGTACTCCACCTATCTgaacctgaagg-------ttactccttaacagaatcccagctgggagctgtttactgatggatgcagctctgctgtga-----aaggagaacagaaggctgggtacaccactgtcagtctacaagaggaaacagaggcaaaactgctagcagtgaacacatctgctcagaaagcttaattaattgctttaactcgagccctggaactatcagaaggaaagtgggctcaggtctatactgactcaaaatatgcttttggaataatacaagctcatggtgcaatctagaaagaaagatgactgttatcttcccaaggaaaTCCTATAAATTATAGTACAGAGATTATGAAATTACTTCAAGCAGTTAATAAACCTAAAGAAATAGCAGTGATACACTGCAAAGCCCATCA ...:x...:..:..:....:....:x..:.....::.x..:.x....x.x.x::.x.:x.:x:.x.....x..x.:::.xx.:x..:.xxxx........::.:...:..x.xxxx:x...:x.x:.xx.:...x..:xxxx:..x:x....x.xxxxx...:.:.x.xx....:x.x:.:::x..:.x.:..x.xxx.x..:::::::.-..x.:....xx...----..x:......x..x..::xx.xx.x:x::.xx....:.x.x:x.:x:....xx:..-------..:xx.x.:.::...-------......:..:.x:::x.....:x......:--..x::.-----.......:x::::x..x.....::.x::x:.x.x:..:x.x:xx.xx::x..:..x.:.::.:.:x.xxx.:x...x..x:.:.........x..:.x........x.:...:...:.:.....xxxx..:..x:..xxx.::x.x:.:..:.....:..xx::....::...xx..:xx.x....:x.....x...xxx..........::x.x..:..:xx:..:x::.....xxx:.x...x.:.x:xxx...:..:x..x...x.:.xx.......xx:x.....:x.x:.::.:.....x.::..:....:..xx..:.. 210M1D14M4D56M7D15M7I30M2I6M5D325M 360/656 54.9% 665/94230402 0.0% 26/656 4.0% -49016798 -45213604 +3127 chr4 + 190214555 9517663 9517662 9517711 49 AAAACAAAGTCAAACGAACAAACAAACAAAAAACAAACCAAAAAAAAAA chr4 - 94230402 38540321 38540320 38540369 55690034 55690033 55690082 49 AAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAA ........::x....:.....:...........x...:...::..:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -29022658 -65207744 +3568 chr4 + 190214555 9541521 9541520 9541578 58 AAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGTCAGAACAAGAGGAGGAGGGAAGAGA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ....:x.:.....:.....:...........:::::..:.....::..........:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 1830172 NA +3147 chr4 + 190214555 9549205 9549204 9549271 67 AAAAACAAGAAACAAACAAACAAAAAAAAACTCAAAAAAGCAGCCCTGACCTAAATATTCACAAGGG chr4 - 94230402 21208659 21208658 21208719 73021684 73021683 73021744 61 AAAAACAAAAAACAAACAAACAAAAAAAAACCCACAGAAGAAAAAC------AATTATTAACCAGGG ........:......................:..x.:...x.:xx.------..x....x..x.... 46M6D15M 50/61 82.0% 61/94230402 0.0% 6/61 9.8% -11659454 -82570948 +3341 chr4 + 190214555 9550001 9550000 9550074 74 CTGTAGCCTTGACTTTCTGGGCTCAGGTGATCCTCCCACCTCAGCCTCCTGGGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::....:x:.x:.......:...:...x.:.x.xx:x........:::::........:...:..x...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -8647125 -85583277 +3112 chr4 + 190214555 9554473 9554472 9554516 44 TTCATTGTGTTTTCTTTCTTTTTCTTTTCTTTTTTTTTTTTTTT chr4 - 94230402 21406220 21406219 21406263 72824140 72824139 72824183 44 TTCACTGTATTTTCTTGCTTTTCTTTTTCTTTTTTTCTTCTTTT ....:...:.......x.....::............:..:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -11851747 -82378655 +3201 chr4 + 190214555 9559536 9559535 9559585 50 TTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGGCAGGATC chr4 - 94230402 71609805 71609804 71609854 22620549 22620548 22620598 50 TTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTTAGACAATATC ............x:..................x..::..x..:..:x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -62050269 -32180133 +3525 chr4 + 190214555 9560275 9560274 9560446 172 ATTCTGTAACAAGGCCCACACATAAGGGTTTTCTTTTTCTTTTGAGACAGTCTTG------------CTTTATTGCC-------------CAGGCT-AGAGTACA-------GTGGCATAATCGTGACTCACTGCAACCTCCGCCTCCTGGGTTCAAACAATGCTTGTGCCTCAGCCACCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197002 18197001 18197199 76033204 76033203 76033401 198 ATTCCCTAACAAGACCTAACTATCAGA-CCCGCTGTCTCTCCTCAGACAGCCTTGTGACCCCAAGCTCTCTGCAGTCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....:x.......:..:.xx:..x..:-:::x..x.:...::.x......:....------------..:.::x.:.-------------......-..:.:...-------x......x..xx.------..:..:..:xx:x..:..........:::x.x.x::x.x.......x::...........:......x...... 27M1D27M12I10M13I6M1I8M7I13M6D74M 112/165 67.9% 198/94230402 0.0% 40/165 24.2% -8636727 -85593675 +3019 chr4 + 190214555 9564353 9564352 9564446 94 CTTATACATACATACCTACATACATGCACACACACACACACACACACACACACACACACACATACACATACATACATACCCAGGCTCTACCTCT chr4 - 94230402 33416681 33416680 33416774 60813629 60813628 60813722 94 CTTTTAGATGAATTCTTGCATGTTTACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACAGAAGACCTGACTACACCCCT ...x..x..:x..x.:.:...::x.:.:..:x.x..x.........:.........x:x...:..xx.x...:.x.x:x..x.:..x:...:.. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% -23852328 -70378074 +3027 chr4 + 190214555 9564354 9564353 9564400 47 TTATACATACATACCTACATACATGCACACACACACACACACACACA chr4 - 94230402 8395816 8395815 8395862 85834541 85834540 85834587 47 TTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:..::..:.......xx..:................x..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 1168538 NA +3238 chr4 + 190214555 9573451 9573450 9573505 55 TTGCAGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735347 92735346 92735400 1495003 1495002 1495056 54 TTGCA-TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG .....-.:.x.....:...:..:.:...............:.x.........:.. 5M1D49M 45/54 83.3% 54/94230402 0.0% 1/54 1.9% -83161896 -11068506 +3107 chr4 + 190214555 9573461 9573460 9573511 51 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGAGACGG chr4 - 94230402 70265141 70265140 70265191 23965212 23965211 23965262 51 TAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG ..x......x...........:..x.:............::.:...x..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -60691680 -33538722 +3410 chr4 + 190214555 9579437 9579436 9579521 85 GATAGCTTTGCTGGGTATAGTATTTTTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTTGTAGTATACATCTCCTTTTC chr4 - 94230402 41570535 41570534 41570619 52659784 52659783 52659868 85 GGCAGTTCTGACATATATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTC .::..:.:..x::x:...xx.....x.x.:::..:.x:..........:...:...:.....:...:.xx::x............ 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% -31991098 -62239304 +3012 chr4 + 190214555 9623195 9623194 9623243 49 TTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACA chr4 - 94230402 54082756 54082755 54082804 40147599 40147598 40147647 49 TTTACAAAAAAAAAAAAAAGACCAAGAACAAACAACAACAAAACAAACA ...................:.xx..:..x...x..x..x.......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -44459561 -49770841 +3062 chr4 + 190214555 9623199 9623198 9623256 58 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAACCCCATCAACAA chr4 - 94230402 31821401 31821400 31821458 62408945 62408944 62409002 58 CACAGAAAAGAAAAATAAAAAAAAGGAGAAAACACAAAACAAAGAACCACAGCAAAAA ..x.:....:.....x........::.:....x.x........x....x..x...x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -22198202 -72032200 +3049 chr4 + 190214555 9633781 9633780 9633833 53 CAATAACTCTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 92014966 92014965 92015018 2215385 2215384 2215437 53 CAATAGCTTTGGTTGTTTCTTCCTTCCCCCCTCACTTTTTTTTTTCTTTTGAG .....:..:..x..x......:...:.:::..:x:..........:....... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -82381185 -11849217 +3246 chr4 + 190214555 9676805 9676804 9676876 72 TGTATATGT----ATATATGTATATAGACACACATATATACATGTACATGTATATATGTATATGTATATATGTATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGAC--------ATACATGGACATGTGCTCATACACATGTACACATGTATG .......:.----................--------.......x......::x:..::.:.....:.:....... 9M4I16M8D39M 53/64 82.8% 68/94230402 0.0% 12/64 18.8% -38490233 -55740169 +3044 chr4 + 190214555 9686097 9686096 9686182 86 TTGTGCTACGGGACTCCAATTCCTGCCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAGGGGAGGGCAGGGGTGATAC chr4 - 94230402 6438478 6438477 6438563 87791840 87791839 87791925 86 TTGTGACCTAGGGCCTCATCTCTTGGTGGTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATGACAC .....x:x::..:.::..x:..:..x:xx.xxx.....:.....::...............::.::.:..::.:::.:.:...:.. 86M 52/86 60.5% 86/94230402 0.0% 0/86 0.0% 3247619 NA +3177 chr4 + 190214555 9700633 9700632 9700698 66 CCTGTCTCAAAAAGGCAAAAAAAAAAAAACAACAAAAAAAAACAAAAAAAAAAACAGGAAGTCTTT chr4 - 94230402 11261207 11261206 11261272 82969131 82969130 82969196 66 CCTAGCACAAAAGGGGGAAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAGGCTTCT ...:x.x.....:..x:.......::.....:x...x.........x...x.....::.:.::.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -1560574 -92669828 +3130 chr4 + 190214555 9727216 9727215 9727282 67 CTGCAACCTCTGCCTCCTAGATTCAAGTGATTCACCTGCCTCAGCCTCCCGAGTAACTGGGATTATA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:..:.:........x.....xx.x........::.:....:....:.:..:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -8469910 -85760492 +3368 chr4 + 190214555 9734286 9734285 9734408 123 TCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATTATTAAACATATTTACTAATTAAATGGTTTTGGAGTACACTCTTTAAAAAAAAAC chr4 - 94230402 1465842 1465841 1465960 92764443 92764442 92764561 119 TTTGTTTTCAACACAAACATAAGAAACAAGAAAAAAAGAAAACCAACCAAAAAAAAGAAGATGAACATTGCAACCAATACTTTTGGATTGGGTGAATGTGGAGT----TTCTTACACAAAAAC .:...:.:x..x.x...x.x..:...x..:.......:....xx..xx........:..:.x:.x....::x.xxx...:..x:x:...:::..:x.x......----.::...x.x...... 104M4D15M 77/119 64.7% 119/94230402 0.0% 4/119 3.4% 8268444 NA +3073 chr4 + 190214555 9738345 9738344 9738414 70 CATATATATATATATATATATATATATATATATATATATATATATGTATATATATTTTTTTTTTTTTGAG chr4 - 94230402 35241744 35241743 35241813 58988590 58988589 58988659 70 CATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTTGAG ....xx....x..::x...xx.x.:..:.x......:..:.:.:.:.........xx...:......... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -25503399 -68727003 +3989 chr4 + 190214555 9740215 9740214 9740355 141 CCCTTCCTCCCTCCTTCCCTCCC-----TCCCTCCCTCTCTCTTTTCTTCCTTCCTTCCTTCT--------TCTCCTTCTGCTTTCTTTCTTTCTCTCTCTCTGTCTCTCTCTTTCTTTCTTTTTCTCTTTCTCTCTCTTTCTTTCCCTCCCTC chr4 - 94230402 77817347 77817346 77817500 16412903 16412902 16413056 154 CCCTTCCTTTCTTCTCCTCCCTCCAAAGTCTCTCCTTCTATTAGTCCTCCTTGCTCTCCTCCTCCAGAACTTCTCCTCATGCTTGCTTTCTTTCTCGCTTTCCAAATTGCTACATTCATCACTGTCGGCTTCTCCTTCTTTTATAAACTCCTTC ........::..:..:.:.:.:.-----..:....:...x.:xx.:..:.:.x.::....:..--------......:x.....x...........x..:..::xx.:x..x:x.::x..x:.x..xx:.....::.....:x.xxx....:.. 23M5I35M8I83M 90/141 63.8% 154/94230402 0.0% 13/141 9.2% -68077132 -26153270 +3387 chr4 + 190214555 9740282 9740281 9740404 123 GCTTTCTTTCTTTCTCTCTC-----TCTGTCTCTCTCTTTCTTTCTTTTTCTCTTTCTCTCTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTTTCT chr4 - 94230402 43081899 43081898 43082024 51148379 51148378 51148504 126 GCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCT--CACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...::...:...:x.x::..-----x.....:...::....:..:.........--.x.:...:x.x..:.x:.:.xx::..xxx:::..x::...:..:.......:....x.xx..:::....... 20M5I29M2D72M 76/121 62.8% 126/94230402 0.0% 7/121 5.8% -33341617 -60888785 +3475 chr4 + 190214555 9740300 9740299 9740374 75 TCTCTGTCTC-------TCTCTTTCTTTCTTTTTCTCTTTCTCTCTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCT chr4 - 94230402 17388715 17388714 17388796 76841607 76841606 76841688 82 TCTCTGTCTCCGCAAAATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTCTCT ..........-------..:.....xx...:.:............:::..:.......:.:.x:..:....x:x:x:..... 10M7I65M 55/75 73.3% 82/94230402 0.0% 7/75 9.3% -7648415 -86581987 +3059 chr4 + 190214555 9740309 9740308 9740408 100 CTCTCTTTCTTTCTTTTTCTCTTTCTCTCTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..::..:..:.::..:.:........x.::..:x.x:::.x:.:.xx::..xxx:::..x.:..::......:........x.xx..::........ 100M 59/100 59.0% 100/94230402 0.0% 0/100 0.0% -33341616 -60888786 +3181 chr4 + 190214555 9740313 9740312 9740412 100 CTTTCTTTCTTTTTCTCTTTCTCTCTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..::..:.....::...:.:.....:x.::...x.x:::.x:.:.xx::..xxx::...x::...:..:............x.xx:.::........ 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% -33341612 -60888790 +3252 chr4 + 190214555 9749452 9749451 9749518 67 CTCTCTCTCTCTCTCTCCATATATATATATATATATATATATATATATATATATATATATTCACAAT chr4 - 94230402 87673943 87673942 87674009 6556394 6556393 6556460 67 CTTTACTCCCCTCCCTCCAGATTGTTACCTATGTGTGTATATATATATTCATACATATATTCACAAT ..:.x:::.:...:.....x..xxx..:x...:.:.:...........x:...:............. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -77924491 -16305911 +3221 chr4 + 190214555 9749458 9749457 9749500 43 CTCTCTCTCTCCATATATATATATATATATATATATATATATA chr4 - 94230402 67224365 67224364 67224407 27005996 27005995 27006038 43 CTCTCTCTCTCCAAATACATATAGATATATAAATATATATATA .............x...:.....x.......x........... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -57474907 -36755495 +3082 chr4 + 190214555 9768975 9768974 9769023 49 CTCCGGAAAAAAAAAAAAAAAAAAAAACAACAACCAAAAACACACCCCC chr4 - 94230402 59925635 59925634 59925683 34304720 34304719 34304768 49 CTTGGGAAAAAAAAGAAAAAAAAAAAACAACCACCACCAAAAAACCCCC ..:x..........:................x....xx..x.x...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -50156660 -44073742 +7121 chr4 + 190214555 9782090 9782089 9782445 356 CTGGCGCAGGGGAACGCCGTGGGGGG------CTCGGCGGGGGCACCGCCACTGGGGCCCTCACAGGTGGTCACCGCCTGCCTGCTGACCCTACTCATCATCTGGACCCTGCTGGGCAACGTGCTGGTGTGCGCAGC------CATCGTGCGGAGCCGCCACCTGCGCGCCAACATGACCAACGTCTTCATCGTGTCTCTGGCCGTGTCAGACCTTTTCGTGGCGCTGCTGGTCATGCCCTGGAAGGCAGTCGCCGA---GGTGGCCGGTTACTGGCCCTTTGGA---GCGTTCTGCGACGTCTGGGTGGCCTTCGACATCATGTGCTCCACTGCCTCCATCCTGAACCTGTGCGTCATCAGCGTGGACCGCTA chr4 - 94230402 1922838 1922837 1923189 92307214 92307213 92307565 352 CCAACGCGACGGACTGCGGCGAGGAGATCCTGCTCTATGGGGACACCGAGA-------------AGATCGTCATCGGAGCGGTGCTCTCCATCATCATCCTCATGACCATCGCAGGCAACGGTCTGGTCATCATCTCTGTCTGCATCGTCAAGAAGCTCCGGCAGC---------CGTCCAACTACCTGGTGGTGTCCCTCGCTGCCGCTGACCTTTCAGTGGCCTTCGCTGTCATGCCCTTCGTGACCATCACGGACCTGGTGGGGGGAGAGTGGCTCTTTGGGAAGGTGTTTTGCAATGTGTTCATTGCCATGGATGTCATGTGCTGCACCGCCTCCATCATGACACTGTGCATCATCAGCGTGGACAGGTA .:::...::x...x:..x.:.:..:.------...x::....:.....xx.-------------..:.x....:..xxxxxx....xx..x.xx.....x..xx....x.xx::.......xx.....xxx.::xx.------......xx:..:x.x..:x.x..---------:.x.....xx.:.x:.x.....:..x..:.:xx.x.......:x.....x:.xx:x..........xx:x.:.x:..:.x..---.....xx..xx.x....:......:---.:...:...:.:..x.xx:.x...x.x..::.........x...:.........x...xx......:..............x.x.. 26M6I19M13D73M6I23M9D82M3I25M3I86M 216/334 64.7% 352/94230402 0.0% 40/334 12.0% 7859252 NA +67850 chr4 + 190214555 9782108 9782107 9783470 1363 GTGGGGGGCTCGGCGGGGGCACCGCCACTGGGGCCCTCACAGGTGGTCACCGCCTGCCTGCTGACCCTACTCATCATCTGGACCCTGCTGGGCAACGTGCTGGTGTGCGCAGCCATCGTGCGGAGCCGCCACCTGCGCGCCAACATGACCAACGTCTTCATCGTGTCTCTGGCCGTGTCAGACCTTTTCGTGGCGCTGCTGGTCATGCCCTGGAAGGCAGTCGCCGAGGTGGCCGGTTACTGGCCCTTTGGAGCGTTCTGCGACGTCTGGGTGGCCTTCGACATCATGTGCTCCACTGCCTCCATCCTGAACCTGTGCGTCATCAGCGTGGACCGCTACTGGGCCATCTCCAGGCCCTTCCGCTACAAGCGCAAGATGACTCAGCGCATGGCCTTGGTCATGGTCGGCCTGGCATGGACCTTGTCCATCCTCATCTCCTTCATTCCGGTCCAGCTCAACTGGCACAGGGACCAGGCGGC--------------CTCTTGGGG---------------------CGGGCTGG---------------------ACCT-GCCAAACAACCTGGCCA-------------ACTG--------GACGCCCTGGGAGGAGGACTTTTGGGAGCCCGACGTGAATG------------CAGAGAACTGTGACTCCAGCCTGAATCGAACCTACGCCATCTCTTCCTCGCTCATCAGCTTCTACATCCCCGTTGCCATCATGATCGTGACCTACACGCGCATCTACCGCATCGCCCAGGTGCAGATCCGCAGGATTTCCTCCCTGGAGAGGGCCGCAGAGCACGCGCAGAGCTGCCGGAGCA---GCGCAGCCTGCGCGCCCGACACCAGCCTGCGCGCTTCCATCAAGAAGGAGACCAAGGTTCTCAAGACCCTGTCGGTGATCATGGGGGTCTTCGTGTGTTGCTGGCTGCCCTTCTTCATCCTTAACTGCATGGTCCCTTTCTGCAGTGGACACCCCGAAGGCCCTCCGGCCGGCTTCCCCTGCGTCAGTGAGACCACCTTCGACGTCTTCGTCTGGTTCGGCTGGGCTAACTCCTCACTCAACCCCGTCATCTATGCCTTCAACGCCGACTTTCAGAAGGTGTTTGCCCAGCTGCTGGGGTGCAGCCACTTCTGCTCCCGCACGCCGGTGGAGACGGTGAACATCAGCAATGAGCTCATCTCCTACAACCAAGACATCGTCTTCCACAAGGAAATCGCAGCTGCCTACATCCACATGATGCCCAACGCCGTTACCCCCGGCAACCGGGAGGTGGACAACGACGAGGAGGAGGGTCCTTTCGATCGCATGTTCCAGATCTATCAGACGTCCCCAGATGGTGACCCTGTTGCTGAGTCTGTCTGGGAGCTGGACTGCGAGGGGGAGATTTCTTTAGACAAAATAACACCTTTCACCCCGAATGGATTCCATTAAACTGCAT chr4 - 94230402 12776670 12776669 12778089 81452314 81452313 81453733 1420 gcgagggggcaggcgggagccccc------ggggcTGCGCAGGTGGCGGCGGGCAGTCTGCTCGCCCTGCTCATCCTCTGGACGCTCTTTGGGAACGTGCTGGTGTGCGCGGCCATCGTCCGCTACCGGCACCTGCGAAGCAAGGTCACCAACATCTTCATCGTGTCGCTGGCCGTCTCGGACCTGCTGGTGGCTGTGCTGGTCATGCCCTGGAAGGCGGTGGCTGAGGTGGCCGGGTACTGGCCCTTCGGGGCTTTCTGCAACGTCTGGGTGGCCTTCGATATCATGTGCTCCACGGCCTCCATCCTTAACCTGTGTGTGATTAGCGTGGACAGGTACTGGGCTATTTCCAGCCCTTTCCGCTACGAGAGGAAGATGACCCAGCGGCTGGCCCTAGTGATGATCGGAGTGGCCTGGGCACTGTCTGTGCTCATCTCCTTCATCCCAGTCCAGCTCAACTGGCACAGAGGTGGGGATGCTGCCACTGCTGCTGCTGCTGGGGACATTGAGGATGGGTTCGGTACTGGCTGGGAGGCAGCGGGTGCTTTCACCACCTGGGCAGAGGACATGAGCACCACATGGGTGGCACTGGCAGCAATGACGCCCTCTGAAG-GCACCTCTGGCAG--CAACAACACTGTCCCTGGGCCATCGGAGAGCTGCGACTCCAGCCTCAACAGGACTTATGCTATTTCCTCCTCCCTGATCAGTTTTTACATCCCAGTGGCTATCATGATTGTCACCTACACGCGGATCTACCGCATTGCCCAGGTTCAGATCCGTCGCATCTCCTCGCTGGAGCGGGCGGCCGAGCATGCGCAGAGCTGCCGCAGCAACCACGTTGACTGCCACCATCACACCAGCCTCAAGTCCTCCATCAGGAAAGAAACCAAAGTGCTGAAGACTCTCTCAATCATCATGGGTGTCTTTGTCTGCTGCTGGCTGCCCTTCTTCATTCTGAACTGCATGGTGCCCTTCTGCGAGAGCCCACCCAGCGACCCCCGGGCTGGGCTCCCCTGCGTCAGTGAGACCACCTTCAACATCTTCGTCTGGTTTGGATGGGCCAACTCCTCCCTCAACCCCATCATCTATGCCTTCAATGCTGACTTTAGGAAGGTCTTCTCCAACCTCCTGGGATGTGGCCAGTTTTGCTCGAGCACTCCAGTGGAGACCGTTAATATAAGCAATGAGCTCATCTCGTACAACCAGGATACCCTTTTCCATAAGGAGATAGTGACTGCTTATGTGAACATGATCCCAAATGTGGTT---------GACTGTGAGGAGAACC---------GGGAGGACCCTTTTGATAGGATGTCCCAGATC---------TCCCCCGACCCCGAGGTTGCCACCGACTCTGTCTGTGAGCTGGACTGCGAGGGGGAGATCTCACTAGGCAAAATCACACCTTTCACTCCAAATGGTTTACATTAAACTCCAT .:.:....x:x......:..x..x------...x.:x.:.......:x:.x.x.x.:.....x:....:......x.......x..x:.x..x.................:........x..xx:...x........x:x...x:.x......:.............x........x..:.....x:.x.....xx......................:..x..:...........x...........:..:..x......:...................:..............x...........x........:..x..:.........x.x........:..:.....x..:.........:..x.x........:.....xx.....:.:..x...:....xx....x...:.x:....::.x..............:..:....................:.::x:..xx..--------------..x:.....---------------------.x......---------------------....-.x..:.x:..x..:x..-------------....--------........xx..:.-.x..:.:...x..--.:..:xx.x..------------.:....:...:...........x..:x.:..:..:..:..:..:.....x..x.....:..:........x..x..:........:..x...........x...........:........x........:x.x..:.....x......x....x..x.....:..............x....---:..:x.x....xxx.x:x..........xx:xx.:.......:...:..:.....:..x..x.....:..x..::.x........x.....:..x..:....................:..x...........x..:......::x:.x.xx...::x.:...:.x...:..x:..........................:..:.............:..x.....:........x.........:................:..:......x:......x..:x..x.x..x.....:..::....x..:.....xx....x..:........x..x..:..x.................x........:..:.:.x.:.....:.....:..x.:::....:..::.xx.......x..x..:.:x...---------:..:.x....x.:..x---------:.....::.....:...x.x....:.......---------.....x..:xx:..xx:..:::.:..x........x.......................:..x:...:......x...........:..:.....x..x.........x... 24M6D449M14I9M21I8M21I4M1I17M13I4M8I14M1D13M2D11M12I183M3I431M9D16M9D32M9D112M 1034/1327 77.9% 1420/94230402 0.0% 129/1327 9.7% -2994562 -91235840 +6942 chr4 + 190214555 9782113 9782112 9782445 333 GGGCTCGGCGGGGGCACCGCCACTGGGGCCCTCACAGGTGGTCACCGCCTGCCTGCTGACCCTACTCATCATCTGGACCCTGCTGGGCAACGTGCTGGTGTGCGCAGC------CATCGTGCGGAGCCGCCACCTGCGCGCCAACATGACCAACGTCTTCATCGTGTCTCTGGCCGTGTCAGACCTTTTCGTGGCGCTGCTGGTCATGCCCTGGAAGGCAGTCGCCGA---GGTGGCCGGTTACTGGCCCTTTGGA---GCGTTCTGCGACGTCTGGGTGGCCTTCGACATCATGTGCTCCACTGCCTCCATCCTGAACCTGTGCGTCATCAGCGTGGACCGCTA chr4 - 94230402 1903513 1903512 1903826 92326577 92326576 92326890 314 GGGTTCACCGAGAAGATCGTCATCGGAGC-------GGTGCTCTCCATC---------------ATCATCCTCATGACCATCGCAGGCAACGGTCTGGTCATCATCTCTGTCTGCATCGTCAAGAAGCTCCGGCAGC-------CAT--CCAACTACCTGGTGGTGTCCCTCGCTGCCGCTGACCTTTCAGTGGCCTTCGCTGTCATGCCCTTTGTGACCATCACGGACCTGGTGGGGGGAGAGTGGCTCTTTGGGAAGGTGTTTTGCAATGTGTTCATTGCCATGGATGTCATGTGCTGCACCGCCTCCATCATGACACTGTGCATCATCAGCGTGGACAGGTA ...:..:x..:.::x.:..:..::..:..-------....x..x..::.---------------x.....x..xx....x.xx::.......xx.....xxx.::xx.------......xx:..:x.x..:x.x..-------...--.....xx.:.x:.x.....:..x..:.:xx.x.......:x.....x:.xx:x..........xx:x.:.x:..:.x..---.....xx..xx.x....:......:---.:...:...:.:..x.xx:.x...x.x..::.........x...:.........x...xx......:..............x.x.. 29M7D13M15D44M6I23M7D3M2D79M3I25M3I86M 201/302 66.6% 314/94230402 0.0% 43/302 14.2% 7878600 NA +7243 chr4 + 190214555 9826462 9826461 9826610 149 CTTTGTTCCTTTTGGAAAATGCCTGGCTGATTTCTGCATAGGTTCTGTTTTTGGTCTCAGGCAGCACAAAATACAGGTAGATAGCACCTGTGATACAAATTGTAGCAAAGACTAGGAAACAGTAGGTGTCCAGACTTTTCTGTGGAAAG chr4 - 94230402 12815906 12815905 12816054 81414349 81414348 81414497 149 CTTTATTTCTTTTGGCAAATGCATGGCTGATCTCGCTCAATGTCTTGTTCTTTGTTTCAGGCAGGACAAAAAACAGGTAGGTTGCTCCTGCAAAGCAGATGGCAGCAAACACGAGGAAGCAGTAGTTTTGCAAACCACTCTGTGAACAG ....:..:.......x......x........:..xx:xx.x..::....:..x..:........x......x........:.x..x....::.x:..:..x.:......x..x.....:......x.x.x..:..:x:......:.x.. 149M 109/149 73.2% 149/94230402 0.0% 0/149 0.0% -2989444 -91240958 +8413 chr4 + 190214555 9834878 9834877 9835011 134 TACCTGAATGAATGGGAAGAGGAGCCCAACAGCAAAGTTGGAGAGCCAGTTGACGGTGCCTGCAATGATGAAGGCAGCCGGCCGCTGAGATTGCTGGAAGAACTCACCAGTCAAGATGAACGGGATGCCACCTG chr4 - 94230402 12829187 12829186 12829320 81401083 81401082 81401216 134 TACCTGAATGAAAGGAAAGAGCAGTCCGACTGCAAAGTTGGAGAGCCAGTTGACTGTCCCAGCTACCATGAATGCGGCCGGCCTCTGAGACTGCTGGAAAAACTCTCCTGTGAGGACAAATGGGATCCCACCTG ............x..:.....x..:..:..x.......................x..x..x..x.:x.....x..:.......x......:........:.....x..x..x.:..::..:.....x....... 134M 109/134 81.3% 134/94230402 0.0% 0/134 0.0% -2994309 -91236093 +3007 chr4 + 190214555 9836092 9836091 9836173 82 AAAAAAAAAAAAAAAAAAAAGATAAAAGAATGATACAACAGACTTTGGGAACTCGGGGGAAAGGGTGGGAGGGGGGTGAGTT chr4 - 94230402 75127003 75127002 75127084 19103319 19103318 19103400 82 AAAAAAAAAAAAAGAAAAAATAATGGAAAGCAAGACAATTTATCTCAGCAACACTGGAGAAAAGGTGGTAAGATGGTTAATT .............:......x.xx::.:.:::.x....:xx.::.::.x...x.x..:....:.....x.:.:x...x.:.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -65290911 -28939491 +3390 chr4 + 190214555 9841357 9841356 9841461 105 TCTCTCTCTTCCTTCTTCTCTCCCTTTCTTTCCTTTCTTCTTTGTTCTAG-TTTCCCAGGTTGGCTCTTTCCCTGTGCATTGTCCTCCATTTCTCTTATCCTTATT chr4 - 94230402 22728497 22728496 22728602 71501801 71501800 71501906 106 TCTCTTTCTCCCTTCTTCCCTCCCTTTTCTTCCTGTTTTTCCTGTTctttctttcttcctttttctcctttctccctctttgctttcccttcatcctctctctgct .....:...:........:........::.....x.:..:::......xx-....::xxx..xx...:..:.::x:x.x...:::...x..:x..:.x..::.::. 50M1I55M 66/105 62.9% 106/94230402 0.0% 1/105 1.0% -12887140 -81343262 +3005 chr4 + 190214555 9888262 9888261 9888321 60 TATATATATACATATATATATATATATGTATATATATGAATGTTTCCTCATATACATTTT chr4 - 94230402 28944776 28944775 28944835 65285568 65285567 65285627 60 TATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGACATATT ....x.:.:...x.........x............:.:...:x...xx...xx....x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -19056514 -75173888 +3378 chr4 + 190214555 9908871 9908870 9908954 84 TTTCATCAAGGAGGTCTGCTTCCATTTTTGTTTGTCCTTCCTTCTTTCTGTGTCAGGATGGTGGAGGTGATG--GCTGGAGCCTCA chr4 - 94230402 27063522 27063521 27063600 67166803 67166802 67166881 79 TTTCATTTAAGGACTGCGCTTCTTTTCTTGCTCCTCCCTCCTCCTTTCTGTGTTAGGAT-------GTGATGAAACTGGAGCCTTA ......:x.:.::x.x:.....:x..:...:.:x...:....:..........:.....-------......--:.........:. 59M7D6M2I12M 58/77 75.3% 79/94230402 0.0% 9/77 11.7% -17154651 -77075751 +3395 chr4 + 190214555 9913291 9913290 9913351 61 TTTCCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982294 18982293 18982354 75248049 75248048 75248109 61 ttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..::..x.x.x.:.x.x.x.x..................x.................::.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -9069003 -85161399 +3697 chr4 + 190214555 9913291 9913290 9913353 63 TTTCCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982292 18982291 18982354 75248049 75248048 75248111 63 ttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...:..x.x.x.:.x.x.x.x.x....................................::.. 63M 51/63 81.0% 63/94230402 0.0% 0/63 0.0% -9069001 -85161401 +3102 chr4 + 190214555 9913312 9913311 9913347 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -71715752 -22514650 +3316 chr4 + 190214555 9913314 9913313 9913349 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -71715750 -22514652 +3102 chr4 + 190214555 9913316 9913315 9913351 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -71715748 -22514654 +3353 chr4 + 190214555 9913316 9913315 9913355 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -9068999 -85161403 +9442 chr4 + 190214555 9920352 9920351 9920579 228 ATGCAAGGATGCCCACCGGGCCCCAGGAC--TCACTGCATTGAGGCCACAGAGCTGGTAGCAGGCCATGGTGACAATCACGGTGACCACCTGCCAGCGGACGTAGGGAGCTCTCAGCAGCTCCAGCACGGACACCAGGCGGATGCTCCTCTGCACGCGGCTCTCAGCCAGGACCTCCTCTACCTCTTGGGAAACGTCTGCTTTACCCAAGAACGTTTGGAAGGCTGCAAA chr4 - 94230402 12860763 12860762 12860992 81369411 81369410 81369640 230 ATGCAATAAGATGCAATGGTCTGAAGGACACTTACTGCATTTAGCCCACAAAGCTGGTAGCATCCCATAGTAACAACCACAGTGATGACTTGCCATCGTACAGCACAGGTTCTAAGGAGCTGAAGGACTGACACTAATTTGGTGTTTCTTTGGACTCGACTCTCTGCCAGAACTTCTTCTACCTCTTGAGACACGTCGTCTTTCCCAAGGAAGGTCTGAAATGCTACAGA ......x:.x::x..x:..x.:xx.....--.:........x..x.....:...........xx....:..:....:...:....:x..:.....x..x..:xx:x::.:...x..x....xx..x..x.....:.:x:x.:..:.:..:..x..x..:.....x.....:..:..:...........:..x.....xx....x..x.:...x..:..:..x...:..:. 29M2I199M 158/228 69.3% 230/94230402 0.0% 2/228 0.9% -2940411 -91289991 +7958 chr4 + 190214555 9980584 9980583 9980751 168 ACACTCACCTTTCCCAGCAGCTCGGGCAGGCCCAGAAGCTGCCCAGTGAACACGCCAATGCAGATAAAGATGGCAGTCACCTGCCCCAGAGAGCCACGGATCTCCTTGGGTGAGATCTCACTAAGGTACATGGGGAGCACACTGAGGGCGACGCCTGTAGAGAGAAAG chr4 - 94230402 12879711 12879710 12879878 81350525 81350524 81350692 168 ATACTTACTGTCCCAAATATCTCTGGCAGCCCCAAGACTTGCCCCATGAAAACACCAACACAGATGAAAATTGCTGTAACCTGACCCAGTGAACCACGGATTTCCTTAGGAGATATTTCACTCAAATACATGGGAAGGGCACTCAAGGAAATGCCTACAAAGGAAGAG .:...:..:x.:..x.::.x...x.....x....::.x:.....x:....x..:....::.....:..:..x..x..x.....x.....x..:........:.....:..x..x..:.....x.::........:..x:....x.:..x:.:....::.:..::.:.. 168M 117/168 69.6% 168/94230402 0.0% 0/168 0.0% -2899127 -91331275 +4288 chr4 + 190214555 9984465 9984464 9984582 118 TTCAGCCTTATTATAGCCTTTTGAAGTAGGTA-TTATTACCA---CCATTTTACAAATGGGAAAACCAAGGCTCAGAGCCATTAAGTAACTTGCAGCAGAACTGAGATCCAAACTCAGGGAT chr4 - 94230402 10729161 10729160 10729282 83501121 83501120 83501242 122 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCCAGGTAT ..:.....:.:x...x..:.x...:.......-...:..:..---..........::.........::....x..x.xxx:........:....xxx:::x...:.xx.x:..::....x.. 32M1I9M3I77M 82/118 69.5% 122/94230402 0.0% 4/118 3.4% -744696 -93485706 +3889 chr4 + 190214555 9995760 9995759 9995834 75 GCAGGTAGAAACTATCATCCCTATTTTACAGATAAGAAAATTGAGGCTCAAATAAATTAAATGATTTGGCCAAGG chr4 - 94230402 10729186 10729185 10729260 83501143 83501142 83501217 75 GTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG .:.....:xx.......x.:.:.........:.::.....:......x..x.:.::....:.:.....x...::. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -733426 -93496976 +8013 chr4 + 190214555 9996775 9996774 9996954 180 ACTGACCTCCCAAGAACCTTTCCAATCATCTTCACAATTAACGTCCCCACAAGTCCACCGATGGCGAATATGGACACAGTCACAGACCAGAGCAAAGTCAGAGTGTCTGGGTCTATTGGACGTCCATGCCTTCTTTCCCATGACTCATTGTAAAAGGCCTTGATGTACTGAAAATAAACA chr4 - 94230402 12887532 12887531 12887711 81342692 81342691 81342871 180 ACTTACCGTCCAAAGAACTTCACAATCGGGGTAACAATAATAGCACCCACAAGGCCACCGATGGCAAAAATGGAAACAGTTACAGACCAGAGGAGAGTCAAGGTGCTTTCATCCACTGAGAAGCCGTATCTTCGTTCCCAAGTTTCATTGTAGAACTTCTTGATATACTGAAAGAAAATA ...x...x:....::.x...:x.....:xxx.x.....x.xx.:x........x...........:..x.....x.....:...........x.:.....::...::.xx:..:.:..::x:x..:.::....x......x.x:........:..xx:......:........:x...:. 180M 126/180 70.0% 180/94230402 0.0% 0/180 0.0% -2890757 -91339645 +3488 chr4 + 190214555 10021926 10021925 10021996 71 GCACCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTATAGGCGTGTGCCACCACG chr4 - 94230402 18197138 18197137 18197206 76033197 76033196 76033265 69 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..x:...........::x...x.xx.x........::................:.--....::....:::. 55M2D14M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% -8175212 -86055190 +3022 chr4 + 190214555 10052295 10052294 10052334 40 ATAAAAACAAAACAAAAAACAAAATAAAACAAAAAAACAA chr4 - 94230402 21291810 21291809 21291849 72938554 72938553 72938593 40 ATGCAAAAAAAACAAAAAACAAAACAAAACAAAAAAACAA ..:x...x................:............... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -11239515 -82990887 +4150 chr4 + 190214555 10057448 10057447 10057564 117 AAGCAGGTATTGTCTTATTTAACCCTCACAATAACTCAACGAGGAAGAT--TCCATGATGGCTCCACGTTCCAAATGAGGAAACTGAGGCACAGAGAGGTTAAGCGACTGGCCTGGAGT chr4 - 94230402 10729148 10729147 10729261 83501142 83501141 83501255 114 AAACAGGAATTG----ATTTAGCC-TCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ..:....x....----.....:..-........x.:.x::....x..:.--.:xx.:x::......:x..x..::..:.:.............x.x........::.:.x...::.... 12M4D8M1D24M2I68M 80/112 71.4% 114/94230402 0.0% 7/112 6.2% -671700 -93558702 +3108 chr4 + 190214555 10062557 10062556 10062628 72 CTGCAACCTCTGCCTCCCAGGTTCAAACGATTCTCCTGCCTCAGCATTCTAAGTAGCTGGGACTACGGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::.......::.x...x.xx.x......x..::..........:.....:x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -8134569 -86095833 +13679 chr4 + 190214555 10074697 10074696 10075514 818 CCGTCAACGCACTAGTTTGTAAACACTG-ACAGGCAACAGTTAAGATACATTAAAAAAAAAGGAAAGATACCCACAATTCCATTCTTAAAATCAAGCACAAAATCTGACAATGAAACATATCCAGGGGTT-----GTGTGT-CCCCATCTG---ATCTGGAGGTGGCGCTCTGAAGGCAGCCACAAGGTGTGAGTCACACAC-TAGGGAGACAGACATCTGTTCAACACAGAATTCCGGCTTTGCTGAACTGCAA-TGCATATTCC--CTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACA-TGAGCCCCCCGGCTCATTCAC-CTGTACAACCTC------CCCTGACAGATAGTGAGAGCCGCGGCGGGGCCAGGGGCTCT---GTGTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGA---------ACGTGTACAGACACCCTGCAGAGACGAGGGTCATGACTGGGCCCTCCTGCCTCTTGTGGTGGGGTGG-GGGCATGGGGGCGCGTCACAGAAAT----AGAGAAATGACATGTTCCGCTGCAGTTAAACTCTAGTCCCTGATTCGGTCCATCCAGAGGCGGGGGTGGGGCTCCTCA---GTAGGTGATTGTCCACTCCTTGACAGAGGCATCATGGGAGGTCGTGACCAGCGTGTGCTCGTCCAGCCAGGCCAGGCTGCTGACATGGTGCAGCCGGTGTGCATCTGGGAAGAAAGGGTGCAATTTAACGAAAA chr4 - 94230402 12947292 12947291 12948056 81282347 81282346 81283111 765 CTGCCACAACAATTATTCGTAAACATTATACCCACAACAGT--AAGTACATCAAAAC-------------CCCACACTTCCGTCCT-AAAATAAATCAAAAAGCTTTGACATGAAATACATAAAAAGTTTATTATGTATGTACCCCATTTTGTTATCTGGAGG-AAAAATCTGA-GGCAACAGTTTGGTGCAGTACAGAGAAGCAAAGCAATATACAGTAGCTGCACACAGCTTGATTGGTTT-CAGGATCACAACTAAATATTCTTACTATGACCGTTAGTACAGAAATGTTCTGTAATTAGAAAAAATGAGAAGTATTACTC--TCATGCTGTACAGTCTCATGTTTCTTGGTTAGAAAAGAACAA--GTGATTGAGTTTGAATCTTTCACGCCAACTTGCTAGGCTGTTGCCTCTGGAATGTTCAGCA----CAAAG----------------------GTTAAGCTCCAGACATAATTTAAGTGCT---------TTTCATGTGCAAACTGTTACTGGCTAAAGCTTTCAAAGTACATTTAATTACAGATATGAACACCCTGTAAAGATATGAG---------------------------GATATGATAGCAGACCCAGAGGC-CAATACAGATTCTTTAAGAGAAATACTATGTTCAGCTGCAGT--AGTTCTAGTCCCTGATTAGGTCCTTCCAAA----GAAACTGCACATTTCAATTGTAGGAAATAGACCATTCTTTGACAGAAGCATCATGGGATGTTGTTACCAGAGTATGTTCATCCAACCATGCCAAGCAGCTTACATGATGTAGTCTGTGAGCATCTGTAAGGCA---GTGCAAAATATCAGAAA .:.:..xx:..x.x:..:.......:.:-..xx:.......--.::.....:....x-------------......x....:.:..-.....x..x..x...:::.x:xx......:.:..xx.::.x..-----..:...-......:.x---.........-::x:x.....-....:.x::xx....:::xx..x.x.x-:.::.x:.:.x...x:x.:.xx......xx.xx:x.x...-.x.:.:::...-.:x......:--..x.xx:.::..................:.:x:..:..x.-....xxx:x:x:...--...:-.......::...------.::x.x:...x.:x:.x.:--.:.::x.:.::x.::x..:.---.:xx:...xxx.....::...............:x...----...:.----------------------....x......x....x:....:.....---------......................x............:.:x.---------..:x:..:::........:.:...::x.:.---------------------------.:.:x.:.:.-:.:.x::.:...-.:x:.....xx:----........:x:......x........--.::..............x.....x....:.----.::::x.x:.x::...---.....x:..x.x...:..:........:...........x..:..x.....x..:..:..:....:...x....:..x...x.....:..:..:.x...x.......x:.:.x.---......xx..x.::... 28M1I12M2D14M13D16M1D43M5I6M1I9M3I9M1D10M1D27M1I40M1D11M1I10M2I40M1I15M2D4M1I12M6I19M2D20M3I38M4D5M22D28M9D40M9I30M27D10M1I12M1D12M4I26M2D30M4D16M3I114M3D17M 487/723 67.4% 765/94230402 0.0% 137/723 18.9% -2872595 -91357807 +10288 chr4 + 190214555 10077302 10077301 10077460 159 ACCTTGGATCTTGACTCTGGTTTCCGGGTCACTCAGGGTCCAAACATACACCATCATGTCCATGCCACCGGAGGCAAAGTGTTCATTGTCTGGGGACCAGGCCAGGCAGACGATTTTTGCATGGTGTCCATAAAAAACATTGTTCTCCTAGTTGCAGGT chr4 - 94230402 12948351 12948350 12948509 81281894 81281893 81282052 159 ACCTGGTATCTTGATTCTGGTCTCAGGATCACTTACAGTCCAAACATATACCATCATATCCATGCCTCCAGAAGCAAAGTGTTCATTGTCTGGTGACCAGGCAATACAAACAACTTTTGCATGATGTCCATAAAAAACATTATGTTCCTGTTTTAAAGT ....x.x.......:......:..x..:.....:.x:...........:........:........x..:..:....................x........x.x:..:..:.:.........:.................:.x:....:x..xx.:.. 159M 129/159 81.1% 159/94230402 0.0% 0/159 0.0% -2871049 -91359353 +5053 chr4 + 190214555 10081352 10081351 10081466 115 CCTACCTGTCCAATGCACACGACCACGGCGTATCCCCCGGGGCCGACGGCTACGCACTTTGGCTGAACGTCCAGTTTCACAACTCCTTGTCCGCTGTTAGAGAGAAAGGAAGCAC chr4 - 94230402 12951202 12951201 12951313 81279090 81279089 81279201 112 CTTACTTGTCCAATGCATAAAACTACAGTATAGCCACCAGGACCCACAGCTAAACATTTTGGTTGAACATCCATTTTCACAGCATCCTGGCCAC---TAGAGGAAAGCGTGGTAC .:...:...........:.x:..:..:.::..x..x..:..:..x..:....x:..:.....:.....:....x.......:.x:.:..x..:.---.....::..:x.x:.:.. 94M3D18M 78/112 69.6% 112/94230402 0.0% 3/112 2.7% -2869850 -91360552 +9743 chr4 + 190214555 10083017 10083016 10083197 181 CTCACCTGTAGTCCCGCAGCATGAGGCTGGTGTACCGCACGGTGTCGTCCATGCTGCAGCTGATGAGCTGCCCCGACTCATCCACGGTCATCCTGGACACCTGGTTCGTGTGGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCCCAGTAATGT--AGGGTGGGGTTAAGGAA chr4 - 94230402 12951980 12951979 12952162 81278241 81278240 81278423 183 CTAACCTGTAGTCCCTCTTGCTAAGGTTGGTATAGCGCACAGTGTCATCCATACTGCAGGTGACAAGCTGATCCATTTCATCCACTGCCATTCTAGAAACCTGGTTTGTATGGCCTTTCCCAGAAAAGCCGTCGTTCTCTCCAGTGTCAGAATCCCAATAATGTACACAGCAGAATTAAGGAA ..x............x.xxxx.:...:....:..x.....:.....:.....:......x...::.....x:..:x:........x.:...:..:..x........:..:.............x:...xx.........:..x..x..x........:......--.x:.::.::........ 164M2I17M 138/181 76.2% 183/94230402 0.0% 2/181 1.1% -2868963 -91361439 +7795 chr4 + 190214555 10084423 10084422 10084546 124 CTCTTTGAGTCAAAGGATATTAATGTGTCCGTCGTGGCTCCCAGAGTAAATGTAGGACTTGCCGCCGTTTTTATGCACCGTCAGACACTGGATCGATTTACTGTGACCCTGTGAAGGAGACACA chr4 - 94230402 12953302 12953301 12953425 81276978 81276977 81277101 124 CTTTATCACTGAAAGGATATTAATATGACCATCGTTACTGCCAGAATAAATATAGGACTTTCCACCATTTTTATGCACTGTGAGACACTGAATTGATTTACTATGACCCTGTGAATAGGACACA ..:.x.x.x.x.............:..x..:....x:..x.....:.....:........x..:..:...........:..x........:..:........:............x::...... 124M 100/124 80.6% 124/94230402 0.0% 0/124 0.0% -2868879 -91361523 +13237 chr4 + 190214555 10087702 10087701 10087956 255 CTTACCTTGATGACGTGCAGGGGCTTGCTGGGGTTGTTTCTGTCCAGATAGTTGATGTACCCGGACAGGGAGACACTGAGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGCTGCTGGTCCAGAACCGTGGAGCCCATGGGAAATGTGCTGACCACGGAGTTCACGCTGACGTCCCAAATCTTGGAAGTTTTGTCCCCAGAAGCAGAAAGCAAATGGGTGCTGTCGGGACTCCAACTAATCTATTCAGAAAAAAGC chr4 - 94230402 12954188 12954187 12954442 81275961 81275960 81276215 255 CTTACCTTTATGACACGTAAAGGTTTATCTGGATTGTTTTTGTCCAAATAATTAATATAGCCAGAAAGAGAAAGAGACAGTAAATGGTCTTTCTGCCACAAGCAACCCAGCTGCTGATCCAACACATTTGATCCCATGTTGAAAGTACTGACAACAGAATTAGCACCAACATCCCAAATTTTAGCAGTTTTATCTCCAGAAGCAGAAAGCAACTGGCTGCTATCAGGGCTCCAACTAATCTGTAAAAACAAATGC ........x.....::.:.::..:..:::x..:......:......:...:..:..:..x..:..x..:..:.x.xxx..:.::.....:........:.:...:...........:....:x..xx.x..x......xx:..x..:.....x..:..:..x:.:.::..:........:..:.x......:..:.................x...x....:..:..:.............:.xx.:.x...x.. 255M 185/255 72.5% 255/94230402 0.0% 0/255 0.0% -2866486 -91363916 +6484 chr4 + 190214555 10088658 10088657 10088760 103 TCTTACCTGGCCGTCAGCACTGGCTGTGGCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTTGACAAAGCGGCTGTGGTCCTGCAGGAAA-ACAATTACC chr4 - 94230402 12955347 12955346 12955450 81274953 81274952 81275056 104 TTTTACCTGGCCATCTGCACTAGCTGTTGCAAACCTGTTCCCATCAGGAGAAAATCTCACACAGTTCACAAACCGTGTATGGTCCTGTAGAAAAGACAACCATC .:..........:..x.....:.....x.....:.................:....x.........x.....x..xx.:........:..:...-....::.:. 94M1I9M 85/103 82.5% 104/94230402 0.0% 1/103 1.0% -2866689 -91363713 +11947 chr4 + 190214555 10097705 10097704 10097897 193 ACTTACGCCAATTGTGAACTTGAACTTGAATGGGGGTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTATGGCCGGCTCTGCTTGATGTCCACGCTGTTGATGACTTTGTTGTGTCCTGTAATCTCGCCCACAGAAGAGCCACTATCCCAGAGGAAGACTGCTCCAAACCTTGAC chr4 - 94230402 12957250 12957249 12957442 81272961 81272960 81273153 193 ACTCACACTTAGTGTAAACTTGAACTTGAATGGAGGTCCCTCAAAGAAAGCAGCACAGTTGTCATCACTGCCAGTTGCTAGACGATAAGGTCTTGTTTGTTTTATGTCCACGCTGTTGATCACTTTGTTGTGCCCAGTGATTTCACCAACAGAAGAACCACTATCCCACAGGAATACTGCTCCAAATCTAGAC ...:..:.:x.x...:.................:..............x..x..:.....:.....:..x..x..x..:..x..:..x..:.xxx.:..:..x.................x...........:..x..:..:..:..x........:...........x.....x...........:..x... 193M 155/193 80.3% 193/94230402 0.0% 0/193 0.0% -2859545 -91370857 +11635 chr4 + 190214555 10098977 10098976 10099142 166 AGAGGAGTGACTCACTTCTCCCTTCCTTCCCCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTTGATCTTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTGCTCCTTCTGCGTGGTATCCCAGATCCTCAGCTTCCCAGACACATCTG chr4 - 94230402 12958668 12958667 12958833 81271570 81271569 81271735 166 AGAAGAATTACTTACTTTTCCCTTCCTTCTCCAACCACAGCAATTCTTTTGCTGTCTTCAGTCCAGGCAAGGTCCTTGATTTTTCCTGCAAACGGCTGATACTCATACTTCAGAAGGTGTTCCTTCTGTGTAGTATCCCAGATTCTCAGCTTTCCAGAGACATCTG ...:..:.x...:....:...........:..:.....:..:..:..:..:..............:....x...:.....:..:..x..:..x.....:.............:x.....:........:..:...........:........:.....x....... 166M 137/166 82.5% 166/94230402 0.0% 0/166 0.0% -2859691 -91370711 +6653 chr4 + 190214555 10103887 10103886 10103988 102 ATACAGTACCTCCGGAGGCAATGTAGAATCCGCTGGGCGCATACTTGGCCACCACCACCTGATGGGCGTGCTCTGTGTAGATGTCAGCAAGGGCTGGGTTCT chr4 - 94230402 12962110 12962109 12962211 81268192 81268191 81268293 102 ATACTTTACCTCCAGACGCTATGTAGAATCCACTGGGAGCATACTTGGCAACTACAACCTGATGGGCATGCTCAGTATAGATGTCAGCAATTGCAGGATTCT ....xx.......:..x..x...........:.....x...........x..:..x...........:.....x..:.............xx..x..:.... 102M 85/102 83.3% 102/94230402 0.0% 0/102 0.0% -2858223 -91372179 +8983 chr4 + 190214555 10115990 10115989 10116243 254 GGGCGTGGCGCCCTCACC----------CTCCCCG--------GGCCAATGGGCAG--GAGGTGAGAAGTGGAGAGGAAGGCGAATTATCCCATCCCAAGGTGGCTCCGGAGCAGAACCGCGCCCGGGGTAG-------GGGGTAC-TCACGTCGATGTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATTGTTGCCCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTGCGGGAGGCTGGCGAACACCTTCTCTGCGGAGA chr4 - 94230402 12965838 12965837 12966111 81264292 81264291 81264565 274 GAGCGCTGCGCCGTGACCTCCAGAGCGGCTCCCCGCCGTGAGGGGAACACGGGGAGACGAGGGAAGAGGGGGGGGGGAAGGAGGGGCGTAACTTCGCGAGGGGGTACGCAAAGAGA--------CAAAATAAATACATCGGGATACATTACATCGATGTTTCGGATGACGACACATTTCCCATTGGTATAGAGAAAATTGTTGCCTTTAGGATCACCTCCAATGATTTTGGACACGCCTCGTTCAACCTGCGGGAGGCTGGCGAACACTTTTTCTATGGGGa .:...:x.....x.x...----------.......--------..xxx.:...x..--....x:...:.x..:.:......x.::x::.xx.x..x.:...x..:x.xx:.:x...--------.::::..:-------...:...-.:..:........:.xx.x..:...:..:..:........:..x..............:.....:..:..x..:.....:.....x.....:.x:..x.......................:..:...::..:.. 18M10I7M8I13M2I58M8D8M7I7M1I135M 177/246 72.0% 274/94230402 0.0% 36/246 14.6% -2849848 -91380554 +3159 chr4 + 190214555 10379410 10379409 10379460 51 TATATGTGTGTATATATATGTGTGTGTATGTGTATGTGTGTGTATGTGTAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x..x........:.:.............x:x..........:.:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -37710087 -56520315 +3135 chr4 + 190214555 10379413 10379412 10379495 83 ATGTGTGTATATATA----TGTGTGTGTATGTGTATGTGTGTGTATGTG--TATGTGTGTGTATATATGTGTATATATGTATATATGTA chr4 - 94230402 39267120 39267119 39267208 54963195 54963194 54963283 89 ATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA ....:....x.x.x.----.x:..:.:x......:.:..x.:.:.:...--.:..............x....::..x.....:x..:.. 15M4I30M2I38M 60/83 72.3% 89/94230402 0.0% 6/83 7.2% -28887707 -65342695 +4095 chr4 + 190214555 10379716 10379715 10379852 137 GTACACATACATACAC-ATACGTACACATATACACACATACATACATATACACACATATACACACATACACACATATACATATATACACACATACATACACATATACATACACATACACATACACACATATACACACA chr4 - 94230402 73121076 73121075 73121213 21109190 21109189 21109327 138 GTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ......x:...x.x..-:..xx:x.:::.::.::..:..x......:...:.....x.x:..::x:....:..:....x:..:.::x::.:..:::x::.......x....:.x:...x.x........:..:.x:.. 16M1I121M 83/137 60.6% 138/94230402 0.0% 1/137 0.7% -62741360 -31489042 +3890 chr4 + 190214555 10379749 10379748 10379862 114 CACATACATACATATACACACATATACACACATACACACATATACATATATACACACATACATACACATATACATACACATACACATACACACATATACACACACACATGCACA chr4 - 94230402 73121100 73121099 73121213 21109190 21109189 21109303 114 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:::.:...:.....x..:...:...:.....x.x:..::x:......::..:.x::.:..:x::.:..:.:x:....:...x.:.::.x....x.x.......:::..:x:.. 114M 68/114 59.6% 114/94230402 0.0% 0/114 0.0% -62741351 -31489051 +3860 chr4 + 190214555 10379770 10379769 10379887 118 ATATACACACATACACACATATACATATATACACACATACATACACATATACATACACATACACATACACACATATACACACACACATGCACACACATACACATACACACACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:.:.......x::..:::.:...:.::.x::.:..:...:.::..x..:.......:..x.::.:::::..x.:..x::.:....::.:x.::.:.:.x...:x:.....x.:... 118M 67/118 56.8% 118/94230402 0.0% 0/118 0.0% -78636312 -15594090 +3954 chr4 + 190214555 10379778 10379777 10379887 110 ACATACACACATATACATATATACACACA--TACATACACATATACATACACATACACATACACACATATACACACACACATGCACACACATACACATACACACACATACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC .::.:.......x.:...::.:......:--.:.::.....:..:..x.::.......:..x.::::.:.:..x....x:::........:x.::.:.:.x..::x::.... 29M2I81M 68/110 61.8% 112/94230402 0.0% 2/110 1.8% -78636304 -15594098 +3439 chr4 + 190214555 10379800 10379799 10379867 68 ACACACATACATACACATATACATACACATACACATACACACATATACACACACACATGCACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:...x..:......x..:..:.......::..::..:...x.:...:..x:..:..:....:.x... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 2783387 NA +3664 chr4 + 190214555 10379865 10379864 10379977 113 CATACACATACACACACATACACACATACACACACACATATATACACATATATGCACATATATACACACATATACACATATATACACATACACACACACATATATACACACAT chr4 - 94230402 73121106 73121105 73121216 21109187 21109186 21109297 111 CATGCATATTCATACACATATACACAG--AAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ...:..:..x..:.......:.....x--.x:..::x:..:....::...x:.:...:x:....::::x:..:.:.:.x...::.x..:.x.x........:....x:..x.. 27M2D84M 70/111 63.1% 111/94230402 0.0% 2/111 1.8% -62741241 -31489161 +3513 chr4 + 190214555 10379866 10379865 10379952 87 ATACACATACACACACATACACACATACACACACACATATATACACATATATGCACATATATACACACATATACACATATATACACA chr4 - 94230402 27943537 27943536 27943623 66286780 66286779 66286866 87 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACA ...x:.......xx:::......:::...x:::::..x....:.....:....::.x:.....:x..x..:.x......:..x.... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% -17563671 -76666731 +3875 chr4 + 190214555 10379876 10379875 10379967 92 ACACACATACACACATACACACACACATATATACACATATATGCACATATATACACACATATACACATATATACACATACACACACACATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .:.x:.......xx:.::.....::..:.x:.:::..x..........:...:::.x......:x..x..:.x........:x.....:.:. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% -17563661 -76666741 +3157 chr4 + 190214555 10379899 10379898 10379982 84 CACATATATACACATATATGCACATATATACACACATATACACATATATACACATACACACACACATATATACACACATACACA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::.:.:..::::.::..:x....:...x:...:..:..::.x..:..xx.:.:...........:.:.x.....x..:x.:. 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 1984112 NA +3505 chr4 + 190214555 10379958 10379957 10380037 80 ACACACATATATACACACATACACACATGTACACATATATATACGTATATAATATATATACACATATACACATATATACA chr4 - 94230402 61485373 61485372 61485452 32744951 32744950 32745030 80 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACA .:.:.....:..........:.....x...::::..:...:..:x.....xx.:..x..::.:.x...x.:.x:.:.... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -51105415 -43124987 +3138 chr4 + 190214555 10380009 10380008 10380068 60 ATATATATACACATATACACATATATACACATACACATATATACACATATACACATATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x.....x.........:..:::x..:.x::....x......::.:.:...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -7140744 -87089658 +3322 chr4 + 190214555 10380023 10380022 10380118 96 ATACACATATATACACATACACATATATACACATATACACATATACACACACATACACACATATACACACACATATACACATATATACACACATGT chr4 - 94230402 27943543 27943542 27943628 66286775 66286774 66286860 86 ATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCA----------AATGTCCACATACATTCACACGTGT ......xx:.:.......:....x:.:.:..x....:.....:..::::.x....:.:x..----------x..:.x......:..x.....:... 61M10D25M 60/86 69.8% 86/94230402 0.0% 10/86 11.6% -17563520 -76666882 +3653 chr4 + 190214555 10380038 10380037 10380143 106 CATACACATATATACACATATACACATATACACACACATACACACATATACACACACATATACACATATATACACACATGTACACACATGGGTACATACATATACA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACAC--AGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:..:..x:..............--.x.x:..::x:....:..:....x::....:x:..:.::.:x:....:.:.x:...:.x..::.:x...:....:..:. 25M2D79M 66/104 63.5% 104/94230402 0.0% 2/104 1.9% -62741068 -31489334 +4203 chr4 + 190214555 10380046 10380045 10380201 156 TATATACACATATACACATATACACACACATACACACATATACACACACATATACACATATATACACACATGTACACACATGGGTACATACATATACATATACATATATATGTATATACATATATACATATACACATACACATATATACGTGTACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAG----------------AAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:..:..x..:.x.x..-.:..xx.x.:::.:..::.....x..:.............x----------------.x:....:........:....x:..:..:x:.......:x:........x.:.:::x....x.x...:.:..:::.:x:.. 17M1D41M16D81M 91/139 65.5% 139/94230402 0.0% 17/139 12.2% -62741029 -31489373 +3529 chr4 + 190214555 10380052 10380051 10380176 125 CACATATACACATATACACACACATACACACATATACACACACATATACACATATATACACACATGTACACACATGGGTACATACATATA----CATATACATATATATGTATATACATATATACATAT chr4 - 94230402 73121100 73121099 73121224 21109179 21109178 21109303 125 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACAC----GAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .:::.::.::.....x..:.......:.....x.x:..::x::.:....::...x:.....----.x::.:.::..:.......:.x...----..:.x.x.:.:.:.......x:..x..x.x.x... 61M4D25M4I35M 77/121 63.6% 125/94230402 0.0% 8/121 6.6% -62741048 -31489354 +3361 chr4 + 190214555 10380076 10380075 10380189 114 TACACACATATACACACACATATACACATATATACACACATGTACACACATGGGTACATACATATACATATACATATATATGTATATACATATATACATATACACATACACATA chr4 - 94230402 4417346 4417345 4417454 89812949 89812948 89813057 109 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-----CACAAACACTAACATATA ..x...:.............:.:.x:x.:...::..::x:x..x::......x:.xx.x:...x..x.......:....x.:.x....:::-----..:.x....xx...:... 91M5D18M 71/109 65.1% 109/94230402 0.0% 5/109 4.6% 5962730 NA +3303 chr4 + 190214555 10380093 10380092 10380193 101 ACATATACACATATATACACACATGTACACACATGGGTACATACATATACATATACATATATATGTATATACATATATACATATA---CACATACACATATATA chr4 - 94230402 4417349 4417348 4417452 89812951 89812950 89813054 104 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATA .......:...:.:.:.....x:x::.:..:......x::x.:..:..::..xx.x::..x..x:....:......x..:x....---....x....xx.:... 85M3I16M 66/101 65.3% 104/94230402 0.0% 3/101 3.0% 5962744 NA +3407 chr4 + 190214555 10380129 10380128 10380237 109 GTACATACATATACATATACATATATATGTA--TATACATATATACATATACACATACACATATATACGTGTACACACATACATGTATACATACAAGTGTATATATACACA chr4 - 94230402 73121103 73121102 73121213 21109190 21109189 21109300 111 GTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:...:.....x....:.......:.::x.--:..:x:..:....:....x::.:..:x:.....::.x.....:.:.x.:.:.:x:...x.x.x::::..:....x:.. 31M2I78M 67/109 61.5% 111/94230402 0.0% 2/109 1.8% -62740974 -31489428 +3232 chr4 + 190214555 10380132 10380131 10380215 84 CATACATATACATATACATATATATGTATATACATATATACATATACACATACACATATATACGTGTACACACATACATGTATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:::.:..::.:.:....x.:......x.......:..:::x....:xx.:...:.:.:..::::...x...:.x...x... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 1984345 NA +3946 chr4 + 190214555 10380190 10380189 10380318 129 TATACGTGTACACACATACATGTATACATACAAGTGTATATATACACATACATGTATATATATGCATGTGTGTGTATATGTATGTGTATGTATATATATACACACACACACACATATATATATATATTT chr4 - 94230402 73121102 73121101 73121218 21109185 21109184 21109301 117 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACAC------------GAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTT .:.:.:..:.:.:x......::......:.x...::.:x:..:.:..:..:.x...:.:------------.x........:x..::..:..x...:::x....x.x........:....x::.x.... 59M12D58M 76/117 65.0% 117/94230402 0.0% 12/117 10.3% -62740912 -31489490 +3364 chr4 + 190214555 10380222 10380221 10380316 95 AGTGTATATATACACATACATGTATATATATGCATGTGTGTGTATATGTATGTGTATGTATATATATACACACACACACA---------------CATATATATATATAT chr4 - 94230402 68558023 68558022 68558122 25672281 25672280 25672380 100 AATGCATATGCACACAGGCATG----------CATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATAT .:..:....::.....x:....----------...:..:..........:::.:.xx...x..x..:..x....:.....---------------........:...... 22M10D48M15I15M 65/85 76.5% 100/94230402 0.0% 25/85 29.4% -58177801 -36052601 +3416 chr4 + 190214555 10380238 10380237 10380315 78 TACATGTATATATATGCATGTGTGTGTATATGTATGTGTATGTATATATATACACACACACACACATATATATATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::....:.::...x:.....:.x.::.........:x..::.xx...:.:.............x.:.:.x..:x... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 1984445 NA +3094 chr4 + 190214555 10392756 10392755 10392832 77 CAGGAATTTATCAGTTTCCTCCATATTTTGATTTCTTTTTTTTTTTTCTTTTTCTGTTTTTTTTTTTTTTTTGAGAC chr4 - 94230402 86613235 86613234 86613311 7617092 7617091 7617168 77 CATGACCTGAACAGTTACTTGCATTTATTGTCTTCTTTTTTTTTTTTTTTTGTCCATTTTTATAATTATGTTGAGGC ..x..x:.x.x.....x.:.x...x.x...x:...............:...x..::.....x.xx..x.x.....:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -76220479 -18009923 +3044 chr4 + 190214555 10392762 10392761 10392825 64 TTTATCAGTTTCCTCCATATTTTGATTTCTTTTTTTTTTTTCTTTTTCTGTTTTTTTTTTTTTT chr4 - 94230402 33215673 33215672 33215736 61014667 61014666 61014730 64 TTCATCAGTTGCTTTTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCT ..:.......x.:.::x.x..:...xx:......::.............x.::.:......::. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -22822911 -71407491 +3037 chr4 + 190214555 10400131 10400130 10400175 45 TTTTGTTGTTGTTTTTTGTTTTTTTTTTGTTTTTTTTGTTTTTCT chr4 - 94230402 60157775 60157774 60157819 34072584 34072583 34072628 45 TTTTGTTGCTGCTTTTTGTTTATTTTTTGTTTCTTGTTTTTCTCT ........:..:.........x..........:..x.x...:... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -49757644 -44472758 +3112 chr4 + 190214555 10472890 10472889 10472998 109 AGACAATTCAGTTTCTCTCTTTTTTCTTTGTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTT------TTTTTTTTTTTGGACAGAGTCTTTGCTCTGT chr4 - 94230402 15963341 15963340 15963453 78266950 78266949 78267062 113 AGTTAACTTAGTTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGA--TTTATCTCTGT ..x:..:.:....x:.:.:x.x:..x.:..x.:..xx.x......:.......:.....:::::...xx..:......------...x....:..:.:.x..--:..xx...... 78M6I18M2D11M 71/107 66.4% 113/94230402 0.0% 8/107 7.5% -5490451 -88739951 +6378 chr4 + 190214555 10490473 10490472 10490676 204 AGGCAAGAGGTGTCTGGTG-AGAGGGAGTGGCTGAGTGAGGTGACACTGTTTCCTGTGGACCCCAGTTTTATCTTTCCCATCAATTAGTATAATGGGAAAATTCTTGTAGTGTTCGATGATGTCTTCTACTGAATCAAACTTCTG-----AAACACAGAAAAGAAAGTTAATGACT------TTTA------AAATATCTTTTGTGTCTGT-AGGTTAAAGTA chr4 - 94230402 13023599 13023598 13023818 81206585 81206584 81206804 220 AGGTAGGATACATCTTGTGCAGCCTTAATGGATGTGTAAGGTAGCACTGTACTCTCTGGATTCCTGTTTTATCCTTTCCATCGATGAGTGTGATGGGAACATATTTGTAGAAGTCAATTATATCTTTCACAGAATTAAATTTCTGGGGGAAAAATTAAAAAATGAAATCAGTGGTTGAAAAATTTAAGTGATAAATATATT---TGTCTATAAAATCAAAGTA ...:.:..x:::...x...-..xxxx.:...x..x..:....::......x::..x....::..x........:..:.....:..x...:.:.......x..x:......x:x..:..x..:....::..x....:...:.....-----...xx:.:....x:..:.:.:..::.------....------......x..---.....:.-.::.:...... 19M1I125M5I26M6I4M6I9M3D7M1I11M 141/201 70.1% 220/94230402 0.0% 22/201 10.9% -2533126 -91697276 +3454 chr4 + 190214555 10507955 10507954 10508038 84 TTACCTTGTTCTCCTTCATGAATGCCTCTTCCACTGCCTGGCGGCTGTATTCTCCAATGTACCATTCATTGTGCTGGACATCCT chr4 - 94230402 13032126 13032125 13032209 81198194 81198193 81198277 84 TCACAGTGTTCTCCTCCAACAGCGCTGCCTCTGCTTCATGGCGATCACATTCTCCAATGTACCATTCATATTTGTGCAAGTCCT .:..xx.........:..xx.::..:x.:..::..x.x.....:::::.....................xx.xx..x.x:.... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -2524171 -91706231 +3120 chr4 + 190214555 10522554 10522553 10522621 68 ACAAGAGTGAAACTCTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAATAAAAATGATGACTCTTT chr4 - 94230402 56866772 56866771 56866839 37363564 37363563 37363631 68 ACTGAAATGACATCTGTTCAAAAAAAAAAAAAAAAAAGACTTAAAGAAAAGAGAAAGGATAGTTTTTT ..x::.:...x.:::x:......................xxx........x.:...x...:::.:... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -46344218 -47886184 +3024 chr4 + 190214555 10522559 10522558 10522611 53 AGTGAAACTCTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAATAAAAATG chr4 - 94230402 4077721 4077720 4077773 90152630 90152629 90152682 53 AGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATG .......:.:::..x..............x.:.....:.::...:x..:.... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 6444838 NA +3309 chr4 + 190214555 10524009 10524008 10524122 114 TCTCAAAGAAAAAGAAAGAAAGAAAGGAAGAAAGGAAGGAAGGAAGAAAAAACAAAAG--------AAAGAAAGAAAGAAAAGAGAAGAGGAGGAGGAGGAGGAG----GAGGAGGAGGAGGATGA chr4 - 94230402 30533160 30533159 30533284 63697119 63697118 63697243 125 TCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGA-ATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA ...:...x......:..........:..:.::..::.:::.xx:x......::...:.--------.....xx....x.:....-.x.....::.::..::::.:----.:::.....::.:..:. 58M8I18M1D20M4I17M 73/113 64.6% 125/94230402 0.0% 13/113 11.5% -20009151 -74221251 +3037 chr4 + 190214555 10537581 10537580 10537668 88 CTTCATCCCTCCCTCCCTGTCTTTCTCCCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988809 18988808 18988896 75241507 75241506 75241594 88 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ......:x::..:.x:x.x.:x:.:..:..xx::..x.:.:..........:....:.......x...x.xx...:.x:..:..x... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% -8451228 -85779174 +3212 chr4 + 190214555 10537595 10537594 10537672 78 CCCTGTCTTTCTCCCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988819 18988818 18988896 75241507 75241506 75241584 78 CCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..:.:.x...:x.::.:...xx::..x...:..........:..:.........x...x.xx...:.x:..:..x... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -8451224 -85779178 +4178 chr4 + 190214555 10537672 10537671 10537822 151 TTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCC-TTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCT-------TTCTTTCTCTCTCTCTTCCTTCCTTCCTTCCTTCTCTTGTTTGTTCTTTCTTTTCTTTTCTTCTTCTT chr4 - 94230402 9693679 9693678 9693835 84536568 84536567 84536724 157 TTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCT--CTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ...xx..:..x.:.:...xx.::......:..-x...:....x.:.x.......--...xxx.x....xx:.x:.xx.:..x..-------.....:.....:..:.:....::...:.:x....::x.x......x...:...::..::...:::... 32M1I21M2D28M7I68M 98/149 65.8% 157/94230402 0.0% 10/149 6.7% 843993 NA +3179 chr4 + 190214555 10537723 10537722 10537832 110 CTTTCTTTCTTTCTTCCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTCCTTCCTTCCTTCTCTTG-TTTGTTCTTTCTTTTCTTTTCTTCTTCTTTTCCTGTGCT chr4 - 94230402 78374924 78374923 78375025 15855378 15855377 15855479 102 CCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGA---------TCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACT .:..:..:x..::.....x..:.....:.::..::.:...........xxx---------..:...:....-:....:.xxx::......x..:x.....:.::..x.:.. 51M9D11M1I39M 67/101 66.3% 102/94230402 0.0% 10/101 9.9% -67837201 -26393201 +3037 chr4 + 190214555 10542644 10542643 10542709 66 GTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACAATTCAATTT chr4 - 94230402 57691393 57691392 57691458 36538945 36538944 36539010 66 GTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTT ..:x...::.::...:x.......:..:x.........::..x....:x...x..:.x..:..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -47148749 -47081653 +3070 chr4 + 190214555 10542657 10542656 10542702 46 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACAAT chr4 - 94230402 26165535 26165534 26165580 68064823 68064822 68064868 46 TGTTCGTGTGTGTTTGTGTGTATCTGTATATACATAAATATACAAT ...x:........x.......:.x........:...x......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -15622878 -78607524 +3237 chr4 + 190214555 10542661 10542660 10542712 52 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACAA-TTCAATTTCCT chr4 - 94230402 89821282 89821281 89821334 4409069 4409068 4409121 53 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTT .........x.x.........:.............:....:-:.....:..:. 41M1I11M 44/52 84.6% 53/94230402 0.0% 1/52 1.9% -79278621 -14951781 +3140 chr4 + 190214555 10542669 10542668 10542709 41 TGTGTGTGTGTGTGTATATATATATATATACAATTCAATTT chr4 - 94230402 19559296 19559295 19559336 74671067 74671066 74671107 41 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTT ................................::.x.x... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -9016627 -85213775 +3140 chr4 + 190214555 10551485 10551484 10551580 96 CTCGAAACTCCTGGGCTCAAGTGATCCACTGGCCTCAGCCTCCAAAAGTGCTGGGGTTACAGGCATGAGCCACCACCCCCTCCTGTAATACCCTTT chr4 - 94230402 18197132 18197131 18197217 76033186 76033185 76033271 86 CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG--------TGTATCATCCTTT .:.:..:..:.....:.......x.:...x..x........::x..:xx.....:::....--.:..x:....::--------....x:.:..... 61M2D12M8D13M 60/86 69.8% 86/94230402 0.0% 10/86 11.6% -7645647 -86584755 +3149 chr4 + 190214555 10571251 10571250 10571341 91 AATTAAAATGCAGTTTTTCTTGCCAGGAAAGTATGCCACTTGGAAAAGTATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTT chr4 - 94230402 32236532 32236531 32236608 61993795 61993794 61993871 77 AACCAAAATGTAATTGCTTTAAAGGGGAAAATGC--------------TTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTCTTTCT ..::......:.:..x:.:.x:xx:.....:.::--------------.x...................:...:.::........:...:. 34M14D43M 55/77 71.4% 77/94230402 0.0% 14/77 18.2% -21665281 -72565121 +3305 chr4 + 190214555 10571251 10571250 10571345 95 AATTAAAATGCAGTTTTTCTTGCCAGGAAAGTATGCCACTTGGAAAAGTATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801488 67801487 67801571 26428832 26428831 26428915 84 AATGAGTATCAAGCTTCTCTT--CAGGA--GTATTTTATTTG-------CTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT ...x.:x..xx..:..:....--.....--....x::.:...-------x.x..x.x...............:..x................... 21M2D5M2D12M7D46M 67/84 79.8% 84/94230402 0.0% 11/84 13.1% -57230237 -37000165 +3062 chr4 + 190214555 10571267 10571266 10571353 87 TTCTTGCCAGGAAAGTATGCCACTTGGAAAAGTATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 44858285 44858284 44858364 49372039 49372038 49372118 80 TCCCTGCCTCAAAA--ATGTCACTT-----ATTGGGTTTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTTGA .:.:....xx:...--...:.....-----.x.:xx....x..x............:..:.x.x..x......x...x......... 14M2D9M5D57M 61/80 76.2% 80/94230402 0.0% 7/80 8.8% -34287018 -59943384 +3265 chr4 + 190214555 10571292 10571291 10571344 53 GGAAAAGTATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTT chr4 - 94230402 32236556 32236555 32236608 61993795 61993794 61993847 53 GGGAAAATGCTTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTCTTTCT ..:...:.::.....x............:.....::x.:........:...:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -21665264 -72565138 +3072 chr4 + 190214555 10571299 10571298 10571351 53 TATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 3484464 3484463 3484516 90745887 90745886 90745939 53 TGTTCTGTACTTTAGTTGTTGCTGTTGTTTGTCTTTTTTTTTTTTTTCTTTCT .:..:.x.::.x.x.............:..x.:..............:...:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 7086835 NA +3104 chr4 + 190214555 10571300 10571299 10571344 45 ATTTTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTTTT chr4 - 94230402 89666551 89666550 89666595 4563808 4563807 4563852 45 ATTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTGTT .......x.................xx.x.............x.. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -79095251 -15135151 +3049 chr4 + 190214555 10571303 10571302 10571342 40 TTTTGTTGTTGTTGTTGCTGTTGCTTTTTTTTTTTTTTTT chr4 - 94230402 67801532 67801531 67801571 26428832 26428831 26428871 40 TTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT ..............:.....x.x:................ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -57230229 -37000173 +3004 chr4 + 190214555 10583261 10583260 10583295 35 ATTTCTTTCTCTCTCTCTCTTTTTTTTTCTTTTTT chr4 - 94230402 18929911 18929910 18929945 75300458 75300457 75300492 35 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ......:.....................:...... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -8346650 -85883752 +3041 chr4 + 190214555 10595078 10595077 10595129 52 TCTCAAAAAAAACCAAACCAAACCAAACCAAACCAAAACAAAAACCCAGAAA chr4 - 94230402 2717928 2717927 2717978 91512425 91512424 91512475 51 TTTCAAAAAAAAC-ATACCAAACCAAACCAACCAAACAAAAAAACCCAAAAA .:...........-.x...............x.x..x.x.........:... 13M1D38M 44/51 86.3% 51/94230402 0.0% 1/51 2.0% 7877150 NA +3025 chr4 + 190214555 10691994 10691993 10692065 72 CTTTTCAACTTTCT---------CATTCTCTCTCCCTGCCTCTCTCTTTTTAAATGTTTTTTTTTTCTTTTCTTTTCTAGA chr4 - 94230402 63336297 63336296 63336377 30894026 30894025 30894106 81 CTTTTCCACCTTCTAAGTTATCGCCTTCCCTCTGCCTGTCACAGACTTTTTCAACTTTTTTTTTCTTTTTTTTTTCTTAGA ......x..:....---------.x...:....x....:.x.xxx......x..:x........:.:....:...::.... 14M9I58M 54/72 75.0% 81/94230402 0.0% 9/72 12.5% -52644303 -41586099 +3416 chr4 + 190214555 10699180 10699179 10699283 104 CTCTCTCTCTCTGTCTCTTAAACACACACATACACACCACATATGTGTGTGTATACACACACATACACACCACGTATGTGTGTATACACACACACACACCACAT chr4 - 94230402 88147162 88147161 88147264 6083139 6083138 6083241 103 CCTTTTTTTTTTTTTTTTTACATGTAAGAATATATAT-ATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTACAT .::.:.:.:.:.x.:.:...x.:::.x:x...:.:.:-.:......x.......:.:......:........::...:x.x:x.x:..:.:.:xx....:.... 37M1D66M 64/103 62.1% 103/94230402 0.0% 1/103 1.0% -77447982 -16782420 +3653 chr4 + 190214555 10752966 10752965 10753039 74 CTGCAACCTCCACCTCCCGGGTTCAAGCAATTCACCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:.........::x.....xx.x........::::.........:......x.x.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -7444160 -86786242 +3644 chr4 + 190214555 10766639 10766638 10766739 101 CCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTGAGATGGAGGCTTGCTCTGTCAC chr4 - 94230402 22629302 22629301 22629399 71601004 71601003 71601101 98 CCTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTA--TTCTTTGCTTCCTTCCTCTCTTCCTGAAGTACAGA-TTGTTTTGTCAC .....::............:x.x...x.x.::x....:..:.x...x...x--......x...:::.::...:...:...::.:x..:-...:.:...... 51M2D35M1D12M 68/98 69.4% 98/94230402 0.0% 3/98 3.1% -11862663 -82367739 +3417 chr4 + 190214555 10771784 10771783 10771840 57 AAACTTTGTCTTCAGAAAAAAAAAAAAAAGAAACCAAACCAAACCAAAACAAAAATA chr4 - 94230402 35903573 35903572 35903629 58326774 58326773 58326830 57 AGAGTTTGTCCTCAGAAGAAAAAAAAAAAGAAAACAAACCAAAACAACCTAACAACA .:.x......:......:...............x.........x...xx:..x..:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -25131789 -69098613 +3155 chr4 + 190214555 10774752 10774751 10774798 47 TACAGATGGAGGAACTGAGGTACAGAGAGGTTAAGTAACTCGCCCAG chr4 - 94230402 10729212 10729211 10729258 83501145 83501144 83501191 47 TACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .....:...:::........:...x.x...........:.:...... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 45540 NA +3871 chr4 + 190214555 10787288 10787287 10787454 167 TGCTTTCTTTCTGTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTC-CTTCTTTCTTTTTCTTTTTTCTCTCTTT-----TTCTTTCTTTCTTTTTCTTTTTTCTTT chr4 - 94230402 45185580 45185579 45185743 49044660 49044659 49044823 164 TGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTT-----------TCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT .....x:.x::::.....::....:..xx...:xx...-----------...x:...x..........::..:--...:.:x.:..::..........xx:.....::.:.:..-...xx.x...:.:x:.x:..x...:.:.-----::.:.xx.:....x.......:..... 38M11D24M2I39M1I28M5I27M 102/156 65.4% 164/94230402 0.0% 19/156 12.2% -34398292 -59832110 +3773 chr4 + 190214555 10787295 10787294 10787431 137 TTTCTGTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCT chr4 - 94230402 45185616 45185615 45185751 49044652 49044651 49044787 136 TTTCTGCTT-CATTCTTTCTTTTCTTTCATT-TTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ......:..-.x................x..-....x:::..::.........xx:....-:......:x...xx.x::.:..x:.x:..x.:.:.::xx:.x::...xx.:....x.......:...:.xx.:..:. 9M1D21M1D28M1I77M 89/135 65.9% 136/94230402 0.0% 3/135 2.2% -34398321 -59832081 +3137 chr4 + 190214555 10787305 10787304 10787385 81 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 8141240 8141239 8141320 86089083 86089082 86089163 81 CCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .:...:x:....x..x...:........x:.:x:..:::..x.....:...:...:..:.:.x.x:.:....::.::.:.. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 2646065 NA +3195 chr4 + 190214555 10787321 10787320 10787390 70 TCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT ...:.:....x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -34810392 -59420010 +4222 chr4 + 190214555 10787350 10787349 10787513 164 TTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCT-----TTCTTTTTCTCTCTTTTTTCTTTCTTT chr4 - 94230402 45185583 45185582 45185743 49044660 49044659 49044820 161 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTT-----TCTTTCATTTTTCACCTTTCTTCTTTCTTTA----ACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x..x..:x:....::....:..-x...:xx...::.x....x.......:..-----.:....x......x.::..:..........x----x..:..::....:..x.x.xx.x:....:x..::..x.......-----::.:.xx.....:x..:..:.:..... 24M1I29M5D31M4D44M5I27M 105/155 67.7% 161/94230402 0.0% 15/155 9.7% -34398233 -59832169 +3999 chr4 + 190214555 10787352 10787351 10787532 181 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTC---------TTTCCTTCTTTCTTTTTCTTTTTTCTC-------TCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTT--CTCTTTCTCTCTTTTTTCC chr4 - 94230402 82033072 82033071 82033270 12197133 12197132 12197331 199 CTTAATTTTTAACTATCTTCCTTTGTTTATGCTTCTCCTCGTACCACCACAGTTTCACTTGATCCTATTTTTTGTATCTCAGAACCTTATCCTTCATTCCTTGTTCTTCTTTTATCTTTTGTTTATGCTCCTCCTTTCCCTTTCTTGTTTTGCCTGTTCCATTATCTGAAATTTCTTTAGATCTATTTCGATTCTTTCC ...xx...:.xx..x....:....x...x.x::.:..:..x.x.---------..:x...xx.:..x...:..x.x....-------.x.::...x...:..x..:.......x......x:::..x...:.:.....:x...:.:x..:.x:..x..:.x:.x.:.xxxx.......--x...x.:..xx..:..... 44M9I27M7I91M2I19M 117/181 64.6% 199/94230402 0.0% 18/181 9.9% -71245720 -22984682 +4265 chr4 + 190214555 10787387 10787386 10787518 132 TCTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTTC-----TCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTCTTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTT chr4 - 94230402 17604543 17604542 17604679 76625724 76625723 76625860 137 TCTTCCTTCTGTGCATCTTTATTCTTATTTTTTCCACAGTCCTTCTGTATTTGTTTTCCACTCTGTTCTCTCTGTTCCACTTCTATCCTATTTGTTTTTTGTTTTGTTTTGTTTTCACTTCGCAGCTTCTTTCCCTT .....:....x.x.x.....x..:..x.......-----..::.:.x.x...x...:::x:...x..:...:.x.:...:.:::x.:..x.:.......:x..:.x.:..x..:..x...:x:xx:.......:... 34M5I98M 86/132 65.2% 137/94230402 0.0% 5/132 3.8% -6817156 -87413246 +3761 chr4 + 190214555 10787390 10787389 10787528 139 TCTTTCTTTCCTTCTTTCTTTTTCTTTT--TTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCATTCTC--TTTCTTTCTGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTTCTCTCTTTT chr4 - 94230402 63216368 63216367 63216510 31013893 31013892 31014035 143 TCTTTCTCACTTGCCTTATTTTTCCTTCAGTCCTCTTCATTTTTTGCTTTGTTTTTGTATGATTTCTTTAACTTCCTCAGTTCCAACAAATCTTTCCTTTTGTCTACTCAATTATTTTTTCTATCTTTCTTTTTCTTCTTCCt .......:x.:.x.:..x......:..:--.:....::x...:..x....x.....x.x.xx.:.:...xx.x.:...--..:.xx:xx:.:....:..:.x...x:.:xx:.x........x.......:.....:::.::. 28M2I48M2I63M 89/139 64.0% 143/94230402 0.0% 4/139 2.9% -52428978 -41801424 +3285 chr4 + 190214555 10787407 10787406 10787487 81 CTTTTTCTTTTTTCTCTCTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTCCCA----TTCTCTTTCTTTCTGTTTTTCTTTCTT chr4 - 94230402 18967333 18967332 18967417 75262986 75262985 75263070 85 CTGTTTTTTTTTTCTCTCTTTTTTTTTTCCCCTCCTTGTCTTATAGTCTTCACAGTTCTGCTCTTACTTTCTATTTTCACTACTT ..x...:................:...::::..::..x.:..x.xx.:...x..----.x.....x......:....:x:.x... 54M4I27M 58/81 71.6% 85/94230402 0.0% 4/81 4.9% -8179926 -86050476 +3292 chr4 + 190214555 10787474 10787473 10787539 66 TGTTTTTCTTTCTTTCTTTTTCTCTCTTTTTTCTTTCTTTCTCTTTCTCTCTTTTTTCCTTTCCTT chr4 - 94230402 70081427 70081426 70081492 24148911 24148910 24148976 66 TGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTT ...:...:...:......::x...x.x:xx.xx...:.......:.....:......::....... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -59293953 -34936449 +3139 chr4 + 190214555 10800737 10800736 10800776 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -8181578 -86048824 +3102 chr4 + 190214555 10800739 10800738 10800774 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -70828325 -23402077 +3253 chr4 + 190214555 10800739 10800738 10800777 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..................x.................::. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -8181576 -86048826 +3316 chr4 + 190214555 10800741 10800740 10800776 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -70828323 -23402079 +3484 chr4 + 190214555 10800741 10800740 10800780 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................:x.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -8181574 -86048828 +3002 chr4 + 190214555 10800743 10800742 10800777 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -70828321 -23402081 +3128 chr4 + 190214555 10800743 10800742 10800782 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x..................x::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -8181572 -86048830 +3138 chr4 + 190214555 10835087 10835086 10835150 64 CATCAGCGTGCACACACACACGCGCGCACACACACACACACACACACACACACACACACAATGC chr4 - 94230402 84262009 84262008 84262072 9968331 9968330 9968394 64 CATGTGTGTGCAAACACAAAGGTGTGCACATGCATACACACACACTCACAGGCATGCACAGGGC ...xx.:.....x.....x.x.:.:.....::..:..........x....x:..::....:x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -73426922 -20803480 +3255 chr4 + 190214555 10838352 10838351 10838414 63 CAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGA-----AAGAAGGTAAAAGTAAAAAAAA chr4 - 94230402 20475870 20475869 20475937 73754466 73754465 73754533 68 CAAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAA ....................:...:...x...:x..:....-----.:...x:......x..x.x... 41M5I22M 51/63 81.0% 68/94230402 0.0% 5/63 7.9% -9637518 -84592884 +3051 chr4 + 190214555 10838355 10838354 10838418 64 AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAGGTAAAAGTAAAAAAAAAAAA chr4 - 94230402 69746849 69746848 69746912 24483491 24483490 24483554 64 AAAGAAAGGAAGAAATTAACTATAAATAGCAAGTAAGAAGGAAGGTAACAGTAAAAATAAAAAA ...:...::..:...xx..xx.x.:.x..x...x.....:........x........x...... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -58908494 -35321908 +3385 chr4 + 190214555 10844191 10844190 10844230 40 AAAAACAAAACAAAACAAAAAACAAACAAACAAAAAACCC chr4 - 94230402 17429026 17429025 17429065 76801338 76801337 76801377 40 AAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAACCC ..:..x.................................. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -6584835 -87645567 +3043 chr4 + 190214555 10844202 10844201 10844257 56 AAAACAAAAAACAAACAAACAAAAAACCCAAAAAAAAAACCCAAAAAACAAAAACA chr4 - 94230402 64669893 64669892 64669948 29560455 29560454 29560510 56 AAAACATAAAACAAAAGAACCATACACCTTAAATAAAAAAACAAAAAACAAAAACA ......x........x:...x.x.x...:x...x.....xx............... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -53825691 -40404711 +3150 chr4 + 190214555 10845851 10845850 10845965 115 CCTTCCAAAACATGTGTGTATATATATATGTGTGTGTGTATACATACACACACACATATATATACACACACATATATACACACACACATATATATACACACACACATATATATAC chr4 - 94230402 17520714 17520713 17520812 76709591 76709590 76709689 99 CCTTCCAGAATATGTTCTTAAA-------------ATGCATTCAGTCA---ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......:..:....x:x..x.-------------:..:..x..xx..---...x.......x.....x.:.:.:.....::::x.:::x.:....x.....::........... 22M13D13M3D64M 69/99 69.7% 99/94230402 0.0% 16/99 16.2% -6674863 -87555539 +3348 chr4 + 190214555 10845862 10845861 10845931 70 ATGTGTGTATATATATATGTGTGTGTGTATACATACACACACACATATATATACACACACATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .....::.......x....x:xx...x....:.:.:.:...:...x.:.x.:.x..........x..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -13290331 -80940071 +3669 chr4 + 190214555 10845863 10845862 10845934 72 TGTGTGTATATATATATGTGTGTGTGTATACATACACACACACATATATATACACACACATATATACACACA chr4 - 94230402 4481681 4481680 4481752 89748651 89748650 89748722 72 TATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .:.....x.x:.....x........:.:.:..:.x...:......x:.:....x.xx........::..... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 6364182 NA +3244 chr4 + 190214555 10845867 10845866 10845937 71 TGTATATATATATGTGTGTGTGTATACATACACACACACATATATATACACACACATATATACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:x.:.:.x..:...x..:..:.:..:..::::.:::.....:.xx.........::.:.......... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -4118947 -90111455 +3563 chr4 + 190214555 10845890 10845889 10845957 68 ATACATACACACACACATATATATACACACACATATATACACACACACATATATATACACACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....x.::..:...x..:...........:...:......x...:.:.:x..:::..:...:.x... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 3249477 NA +3149 chr4 + 190214555 10845905 10845904 10845973 69 CATATATATACACACACATATATACACACACACATATATATACACACACACATATATATACACACACTT chr4 - 94230402 66904846 66904845 66904914 27325489 27325488 27325557 69 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTT .......:...::.....:.:................x..x::x..x::::...:.xx:.:..:..:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -56058941 -38171461 +3242 chr4 + 190214555 10845905 10845904 10845969 65 CATATATATACACACACATATATACACACACACATATATATACACACACACATATATATACACAC chr4 - 94230402 7596412 7596411 7596476 86633927 86633926 86633991 65 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ....:.x..:..:...x..:....:......:...:....:.x...:.:..x..:::.::...:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 3249493 NA +4517 chr4 + 190214555 10874596 10874595 10874828 233 TTGCTTTCCCTGCTGCATGAGTGCTATTCAAAGACTTTTTGTTTTACCTCATCCTC-TTGTTTTATG--------------------ATGAATTTGTGC---GTGA-AAAGACTCATTAAGAACATCATTATTCTACATTTATCAGTAATGAACTGTCTGTGGCACCTATTAGCAGCAAAATGGTCTAAGTCCCGTTTTGTATCTGTCTACATTCTTCTTCATTATTTTCTGCTCCACTCTCATCCATTTAAAATGGA chr4 - 94230402 78657091 78657090 78657343 15573060 15573059 15573312 253 TCACTTCTCATTATTCATAAATAATATTAAGAGACTTATCTTTCAACTTTCTGCTCCTTTTTTTATTCATCATATTTTACAAGCCACACACATTTACACTATGTGATAAAGACTTCT--AAAAC-TCATTATTCTACGTTTATCTGTACTGAACTGTCTTTCCACTCTTTTAGATTTCATATGTTCTAAACCTTCCTTTGTGTC--GCTGCATTTGTTCTCATTATTTACTGTCTTTTTACTACCCACTCAAGTTGAA .::...::.x.xx.x...:.:.:x....x.:......x.:x..:x..:.:x.x...-..x......x--------------------.::x....:::.---....-.......:x.--.:...-............:......x...x..........x.xxxx:..x....xxx:x.x...x.....::.::x:.....:..--x..:....:x.::.........x...::::x:.x::.:...:.:..:x..:. 56M1I10M20I12M3I4M1I10M2D5M1D79M2D52M 148/228 64.9% 253/94230402 0.0% 30/228 13.2% -67782495 -26447907 +6071 chr4 + 190214555 10874619 10874618 10874820 202 CTATTCAAAGACTTTTTGTTTTACCTCATCCTCTTGTTTTATGATGAAT------TTGTGCGTGAAAAGACTCATTAAGAACATCATTATTCTACATTTATCAGTAATGAACTGTCTGTGGCACCTATTAG-CAGCAAAATGGTCTAAGTCCCGTTTTGTATCTGTCTACATTCTTCTTCATTATTTTCTGCTCCACTCTCATCCATTT chr4 - 94230402 51102810 51102809 51103000 43127403 43127402 43127593 191 CTTTTCAATGA-TTTTTGTTCTCCCT---------ATTTTATAATACATGCACAGTTGTTT-TATAAAAACTCATCAAAGTCACCACTGTTCTACATTTATCTGCATTGAACTGTCTCTGTCATTTATTAGTCTTTTAAATGTTCT---TTATATTT----TCTAGTTACATTCTCCTTCATTATTTACTGTTCCTCTATCATCTCTTT ..x.....x..-........:.x...---------:......:..:x..------....x:-.:x...:......:..::x..:..:.:.............x.:.x..........x..x..::......-.xx:x.....x...---.:x::...----...:x:........:...........x...:...x..x.....:x... 11M1D14M9D14M6I6M1D69M1I14M3D8M4D48M 138/184 75.0% 191/94230402 0.0% 25/184 13.6% -40228191 -54002211 +3059 chr4 + 190214555 10888386 10888385 10888447 62 TTTCAAATTTATTTCCTTTATTTATTTTAGCTCTCTCTTCCTTTGCTTTCTTTTTTTTTTCT chr4 - 94230402 14200786 14200785 14200847 80029556 80029555 80029617 62 TTTCTAATTGATTTCTTCTTTTTGTTTTAGCTCCTTCTTCCTTCTCCCTTTGTTCTGTGTCT ....x....x.....:.:.x...:.........::........:x.::.:.x..:.x.x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -3312400 -90918002 +3048 chr4 + 190214555 10890834 10890833 10891037 204 ATGGAGAAAAGAAAAGATGTTATAGAACAAGGGGCTCCTGAGAACAAGTGCAGAACAG---AGACAGGCATCATTGGCTTGGTCAGCACTCAATCACTTACTAGTATACATTCTTTCATTAATAC---TAAAATGTTT---------CAAATTTATAGAGT-----GGTTTTGTTTTTGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTG chr4 - 94230402 70302497 70302496 70302707 23927696 23927695 23927906 211 ATGGAGAAAAGTAGGGAT--TATTAAAGAAGAGAATT------ACATAGGTAAAACTGCCTGGATGGGACT--TTGGGCTTTTCATCCCCCAATT--TTACTTTTATCC-TCCTTTAAGGAATACAGCTGACATTTATTTTTATAATCAAGTTTAATGAAGCTGTGGGTGGTACTTTTTTTTTGTTTGTTTGTTATTGTTATTGTTGTTAGTTTCTATTTTCTG ...........x.::...--...x:..x...:.:x.:------...x:x.:.:...x.---:..::..xx.--....x:.xx...x.x.:....:--.....xx...x.-.:....x.xx.....---.:.x..x.x.---------...:....xx..:x-----...xx.::....x......:.x......:.....:.....x..x....:.x....:.. 18M2D17M6D15M3I10M2D22M2D12M1D15M3I10M9I14M5I58M 132/191 69.1% 211/94230402 0.0% 33/191 17.3% -59411663 -34818739 +3145 chr4 + 190214555 10890979 10890978 10891033 55 TGGTTTTGTTTTTGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTT chr4 - 94230402 88288836 88288835 88288890 5941513 5941512 5941567 55 TGGGCATGTTTTTTTTTTTTTTTTTTGTTGCTGTTGTTGTATTCTGTGTTGTTTT ...x:x.......x....x.:.........:.........x..:...x..x.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -77397857 -16832545 +3174 chr4 + 190214555 10890987 10890986 10891036 50 TTTTTGTTTTGTCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTT chr4 - 94230402 3484460 3484459 3484509 90745894 90745893 90745943 50 TTTCTGTTCTGTACTTTAGTTGTTGCTGTTGTTTGTCTTTTTTTTTTTTT ...:....:...x:...x.......:........x.:x............ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 7406527 NA +3154 chr4 + 190214555 10890998 10890997 10891036 39 TCTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTT chr4 - 94230402 66916767 66916766 66916805 27313598 27313597 27313636 39 TTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTT .:......................:........x..... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -56025769 -38204633 +3616 chr4 + 190214555 10891092 10891091 10891165 74 CTGCAACCTCTGGCTCCCAGGTTCAAACAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:...:.::.......:::x...x.xx.x........::.:.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -7306034 -86924368 +3082 chr4 + 190214555 10916261 10916260 10916340 80 TGTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTT chr4 - 94230402 87215244 87215243 87215323 7015080 7015079 7015159 80 TGTCTTTCTGATCAGTTCCTTTCTTTTTTTCCTTTTTGTATTTTTATCTTGCCTGTCTTTCTGAGTTCATGTCTTTTTCT .........xx..xx...:........:..:::....x.x..:..x....x:..x.::..:.xxx...x.x.......:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -76298983 -17931419 +4078 chr4 + 190214555 10930786 10930785 10930910 125 TAGTAAGCATTACATATATATATATATACACACACACACATATATATATACATATATATGTGTATATATGTATATGTAATGCTTACTATATGAACATATGTATACATATATACATATATGTGTAT chr4 - 94230402 21704664 21704663 21704788 72525615 72525614 72525739 125 TAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT ...x..:.x...:......:..:.:.:............:.:....x.xxxxx...x.....x..:xx..xxxx::x:.x:...xx..:.....:...x:x...:......::....:.:..x.. 125M 81/125 64.8% 125/94230402 0.0% 0/125 0.0% -10773878 -83456524 +4078 chr4 + 190214555 10930786 10930785 10930910 125 TAGTAAGCATTACATATATATATATATACACACACACACATATATATATACATATATATGTGTATATATGTATATGTAATGCTTACTATATGAACATATGTATACATATATACATATATGTGTAT chr4 - 94230402 21701091 21701090 21701215 72529188 72529187 72529312 125 TAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT ...x..:.x...:......:..:.:.:............:.:....x.xxxxx...x.....x..:xx..xxxx::x:.x:...xx..:.....:...x:x...:......::....:.:..x.. 125M 81/125 64.8% 125/94230402 0.0% 0/125 0.0% -10770305 -83460097 +3130 chr4 + 190214555 10930795 10930794 10930876 82 TTACATATATATATATATACACACACACACATATATATATACATATATATGTGTATATATGTATATGTAATGCTTACTATAT chr4 - 94230402 71630134 71630133 71630215 22600188 22600187 22600269 82 TTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAAT ....:.::..::.....:.......x.:.:.:....x.x.::..::..:...x.::..:..x......:xxx...x..:x.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -60699339 -33531063 +3719 chr4 + 190214555 10930915 10930914 10931022 108 GTATACATAGATATGTGTATGTATGTATACATAGATATGTGTATGTATGTATACATATATGTGTATATATGTATACATATATATGTGTATGTATGTATACATATATGT chr4 - 94230402 73121101 73121100 73121208 21109195 21109194 21109302 108 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTAT ..:.:...:x....x::..:::..:..:...x.:::...x...::..:.....x:..:.:.x......:..x:........x..::.:x:::.x:x.:...:..:.:. 108M 65/108 60.2% 108/94230402 0.0% 0/108 0.0% -62190186 -32040216 +3176 chr4 + 190214555 10931047 10931046 10931127 81 ATGTATGTA----------TACATATATATGTGTGTGTATGTATATATGTGTGTATATATGTATATATGTATGTGTATATATGTATATATA chr4 - 94230402 39267120 39267119 39267210 54963193 54963192 54963283 91 ATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA .........----------.x.:....x........:.:x.:::.::..xx...:.:.:........x..:..::.x.:....x.....:. 9M10I72M 57/81 70.4% 91/94230402 0.0% 10/81 12.3% -28336073 -65894329 +4196 chr4 + 190214555 10931095 10931094 10931242 148 ATGTATATATGTATGTGTATATATGTATATATATGTATACACACATCCCCACACTCATACACACACACATATATATAATACATACATATAACAATCTCACAGTAATGATCTGAAAAATGAGATGCTGTAAGTGCTTATAAAATTGCAT chr4 - 94230402 8395788 8395787 8395922 85834481 85834480 85834615 135 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTA------TGCCTACATTAATACACACACACACACACA-GACACAAATGAATAAAAAACCCAAACT-ACATTCTGGCAAATAAG-----GTAGGTATTAATAAAGCTGTAT ....:.:.....:..::..x.:......x..:..:.:..------.x..:...:.x.............:.:.:.-:.:...x.::x....x..x.:..x.x.-.::x....:x....:..-----...:..::.x.....::..:.. 39M6D30M1D27M1D17M5D22M 93/135 68.9% 135/94230402 0.0% 13/135 9.6% 2535307 NA +4268 chr4 + 190214555 10953166 10953165 10953375 210 CTTTCTTTCTTTCTTTCTTTTCTTTC---TTTCTTTCTTTCCTTCCT---TCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTT---CTTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT----TCTTTCTT--TCTTTCACTTTCTTTCCTTTCTTTTTTCT chr4 - 94230402 92912836 92912835 92913049 1317354 1317353 1317567 214 CTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTT-----------TCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCT ..:..:..xx:...:::...:.x...---.xx..x:.:......:..---...xxx:.x.:....x...x:x:...:......:...:....xx..:x:....x::::..x...---..x.......-----------........:..::.:.....:..:.xx.::.x.::.x..x.:..----.......:--..:..x:...x:x.x...:...x:.:... 26M3I18M3I64M3I10M11D44M4I8M2I29M 129/199 64.8% 214/94230402 0.0% 26/199 13.1% -81959670 -12270732 +4153 chr4 + 190214555 10953173 10953172 10953374 202 TCTTTCTTTCTTTTCT---TTCTTTCTTTCTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTTCTTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTT---TCTT------TCTTTCTTTCTTTC-----------TTTCTTTCTTTCTTTCACTTTCTTTCCTTTCTTTTTTC chr4 - 94230402 28459063 28459062 28459277 65771126 65771125 65771340 215 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTC---------TCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTT-ACCCTGTTCCTCTGCCTTTTTC ..x..:...:...x..---..:x..x..x.....:x.x..:.:.x.:.:::::.::.:...:.:..xx.x..:x.::.:x..:.xx......:.....::xx..:..x.x......---------.......:x...:....:....:.---....------.x......x..xx.-----------.....x.....x...-..::.x..:.::.x.:...... 16M3I97M9D24M3I4M6I14M11I15M1D22M 128/192 66.7% 215/94230402 0.0% 33/192 17.2% -17505890 -76724512 +3166 chr4 + 190214555 10953189 10953188 10953253 65 TTCTTTCTTTCTTTCCTTCCTTCCTTCCTACCTCCCTCTTTCTTTCTTTCTTCCTTCCTTCCTTT chr4 - 94230402 2453081 2453080 2453145 91777258 91777257 91777322 65 TTTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTTT ..:.:.x...:......::.:..............::...x....:..::..x:.x::..x:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 8500108 NA +3019 chr4 + 190214555 10953224 10953223 10953298 75 CTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTTCTTTTTCTTTTCCTTTCTTTCTCTC chr4 - 94230402 15446135 15446134 15446209 78784194 78784193 78784268 75 CCTTTTGCCTCTTCTTCCCTCCAGTATTGCCTTTTTTCTTTCGTTTTGTTTTTTCTCTTTGCCTTGCTTTCCCTC .::...x::....::.:...:.xx.x:.x:....:...:...x..::x..:...:.....x....x.....:... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -4492911 -89737491 +3773 chr4 + 190214555 10953231 10953230 10953373 143 TTTCTTTCTTCCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTTCTTTTTCTTTTCCTTTCTTTC----TCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTTTCTTTCCTTTCTTTTTT chr4 - 94230402 28459066 28459065 28459211 65771192 65771191 65771337 146 TTTTTTTTTTACTGACTTTATT-ATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCT ...:...:..x..xx...:x..-x..x...:..x:x:.....x...x....:.:....:..:::----...x...::x::.:xx.::.......:.::xx.:...x.x::.....:.....:x...x....:......:xx.:..:. 22M1D41M4I79M 89/142 62.7% 146/94230402 0.0% 5/142 3.5% -17505835 -76724567 +3494 chr4 + 190214555 10953253 10953252 10953340 88 TCTTTCTTCCTTCCTTCCTTTCTTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 35294594 35294593 35294681 58935722 58935721 58935809 88 TCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC .....:.:....x.x.:x......:...:...x.......x:.:..:...:.:::.x..:..:...xx.:x..x.:..::.:..x... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -24341341 -69889061 +3491 chr4 + 190214555 10953269 10953268 10953387 119 CCTTTCTTTTTCTTTTCCTTTCTTTC-TCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTTTCTTTCCTTTCTTT----TTTCTTTCCCTTGCAGA chr4 - 94230402 23468156 23468155 23468279 70762124 70762123 70762247 124 CCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCTGACAGA .....:.....:.........::...-x.x:xx.x..x:.....xx...x..:..::.:.x.....xxxx.:::.x.:x..........::..x::..::...----....:.:....x:.... 26M1I76M4I17M 78/119 65.5% 124/94230402 0.0% 5/119 4.2% -12514887 -81715515 +3069 chr4 + 190214555 10953275 10953274 10953349 75 TTTTTCTTTTCCTTTCTTTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151551 56151550 56151625 38078778 38078777 38078852 75 TTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT .....:......x..:.:...x.xx:xx..:..:.x:x..::..:.::.:............::.:......x.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -45198276 -49032126 +4131 chr4 + 190214555 10963974 10963973 10964119 146 ATTTGAACACAGGTGCATGCACACACACAGGTACACACTCACATATGCATACACACGTGAACACAGGTGCATGCACACACATGCACACATGTGCACACACTTGTACACACATGAACACAGGTGCACACACAGGCACACACATGCAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCAC----------------------ACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCAC------ACACGGATGCGTGCCCATGGGCACACCTGCAC ..x..x.....xx...............:xx.:.:...----------------------.....x.::x.....:....:.:x.::::......x.......::...------....:.:...:::.x..x.x:.....x..... 38M22D48M6D32M 84/118 71.2% 118/94230402 0.0% 28/118 23.7% -78052108 -16178294 +4490 chr4 + 190214555 10989491 10989490 10989561 71 TTCTCTCCCTCTCTCTCTCTTTCTCTGTGTGTGTGTATGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAA chr4 - 94230402 18982288 18982287 18982352 75248051 75248050 75248115 65 ttttttttctctctctctctctctctctGTGTGTGT------GTGTGTGTGAGAGAGAGAGAGAGAGAGGA ..:.:.::............:.....x.........------........................:..:. 36M6D29M 57/65 87.7% 65/94230402 0.0% 6/65 9.2% -7992797 -86237605 +4788 chr4 + 190214555 10989491 10989490 10989566 76 TTCTCTCCCTCTCTCTCTCTTTCTCTGTGTGTGTGTATGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAATATGT chr4 - 94230402 18982290 18982289 18982361 75248042 75248041 75248113 72 ttttttctctctctctctctctctctGTGTGTGTGT----GTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ..:.:..:............:...............----.......x.x...............:...:..x.:. 36M4D36M 62/72 86.1% 72/94230402 0.0% 4/72 5.6% -7992799 -86237603 +3216 chr4 + 190214555 10989513 10989512 10989574 62 CTCTGTGTGTGTGTATGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAATATGTATATGAAG chr4 - 94230402 81022616 81022615 81022673 13207730 13207729 13207787 58 CTCCAAGTGTGTGCATGTGTGCATGTGTTAGAGAGAGGGAGAGAAG----ATGTCTACAAAG ...::x.......:.......::.....x........:.......:----....x..::... 46M4D12M 46/58 79.3% 58/94230402 0.0% 4/58 6.9% -70033103 -24197299 +3054 chr4 + 190214555 10989524 10989523 10989559 36 TGTATGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ...:......:......................:.. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% -70639540 -23590862 +3083 chr4 + 190214555 11030923 11030922 11031008 86 AAAATGTGGTGTGTGTGTGTATA---TATATATATATATATATGTGTGTGTGTGTGTGTATATTATATATATATGTGTGTGTATATATA chr4 - 94230402 25938441 25938440 25938529 68291874 68291873 68291962 89 AGAGTATGATATACCCACATATAAATTATATATAGACATGTAACTGAGTTTGTATTCATGTATTATATATAGGTGTGTGTGTGTGTCTA .:.:.:..:.:.::x::::....---........x.:..:..xx..x..x...:.x::.:...........x:.........:.:.x.. 23M3I63M 57/86 66.3% 89/94230402 0.0% 3/86 3.5% -14907518 -79322884 +3163 chr4 + 190214555 11030941 11030940 11031009 69 GTATATATATATATATATATATGTGTGTGTGTGTGTGTATATTATATATATATGTGTGTGTATATATAT chr4 - 94230402 6900827 6900826 6900895 87329508 87329507 87329576 69 GTGTTCAGACTTAAATTTATATGTGTGTGTATGTATGTACACTGCTAGTATACGTGTATATATATACAT ..:.x:.x.:x..x..x.............:...:....:.:.::xx:....:....:.:......:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 4130114 NA +3439 chr4 + 190214555 11053444 11053443 11053517 74 CTACAACCTCGGCCTCCTGGGCTCAAGGGATCTTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:..:x::x..:.....:.....x.x.::x:xx.x........::...........:......x.x.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -7143682 -87086720 +4206 chr4 + 190214555 11068066 11068065 11068288 223 AAATATAGATATTTTAAAGA-CTGATGAAAGAAGAGAAGGAAAGAAAAAGGAAGGGAAAGAAGGAAGGAAGGAAGGAAGGAAAG-------AAAGAAAGAAAGAAAGA-----------AAGAAAGAAAGAAAGA------AAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAA----------GGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAACTAGTTCCTT chr4 - 94230402 79684085 79684084 79684342 14546061 14546060 14546318 258 AAATTTGAAAGCTTTACAGAGCCCaagaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCTATACATAAAGAAAATATAATTACTCCAACCACAGAAATACTGATTTTTATTGGTAGAAAACATAGCAGGGCTTTTTGAGAGAACACCACTGAATGAAAGCAAGAGAAGCAAAAACCAGATGAAAGGAAAAAAAGAAGAGACAGATGAAAGAAAAGATGAGAGCTGGGCAAGAAAACAGGAGGGTCATTTCCTT ....x.::.x::....x...-.:x.x.......:.:..::...:.....::..:::...:...xx.x:x.x:...:..:x.x.:-------..xx.x.....x.xx..-----------.::...x.x..x.:.:------:...:.:x.xx.xx:........x....:.:.x.----------.:........:..::.:.......x........::.x:...:xx::.x......:x.:..:::::.x...... 20M1I63M7I17M11I16M6I34M10I73M 139/223 62.3% 258/94230402 0.0% 35/223 15.7% -68616019 -25614383 +3202 chr4 + 190214555 11068095 11068094 11068203 109 GAAGAGAAGGAAAGA---AAAAGGAAGGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAA chr4 - 94230402 32638690 32638689 32638801 61591602 61591601 61591713 112 GAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAATATaa .....x:....:..x---..::......:..:...:x..:.:::xx..x:::x...xx:.x..:....:.x...x:.:..xxxx.:.....:.:..............:x.. 15M3I94M 69/109 63.3% 112/94230402 0.0% 3/109 2.8% -21570595 -72659807 +3202 chr4 + 190214555 11068095 11068094 11068203 109 GAAGAGAAGGAAAGA---AAAAGGAAGGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAA chr4 - 94230402 32636727 32636726 32636838 61593565 61593564 61593676 112 GAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAATATaa .....x:....:..x---..::......:..:...:x..:.:::xx..x:::x...xx:.x..:....:.x...x:.:..xxxx.:.....:.:..............:x.. 15M3I94M 69/109 63.3% 112/94230402 0.0% 3/109 2.8% -21568632 -72661770 +3918 chr4 + 190214555 11068103 11068102 11068321 219 GGAAAGAAAAAGGAAGGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAA------GGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAACTAGTTCCTTAAGAAAGTAGTGAATTGAATAAAGGCAGTTGTA chr4 - 94230402 60249506 60249505 60249727 33980676 33980675 33980897 222 GGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAACTTGTCAGAGACCAGCAAAAGGCA-AGAAGTGGCAGAAAGCGGGAATGGAAAATATGAATTGGAAGTAGGGGC--AATGGAGTCAAGAAATGGGTAGGGTCAGGTGTA ...x..:...:...:.....:x.x:....:......x......x....xx..:..x....x:...::.x.xxx.x.:...x:...x:.xx.:.:...xx:..:x:::..:.x..:..------:..:.xx.:x:....:..-.::.:x.:x.....:x.::.:x:....:x.x...xx::..x...xxx.--..x::...x:x...x..::..::.x...x.... 117M6I18M1D48M2D33M 127/216 58.8% 222/94230402 0.0% 9/216 4.2% -49181403 -45048999 +3026 chr4 + 190214555 11068134 11068133 11068242 109 AGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGA chr4 - 94230402 73209987 73209986 73210095 21020308 21020307 21020416 109 AGGAAGCAAGAAAAGAAAGAAACGATGCCGTAAGTATGAAAAAGATCCATGGGAGAGACAAAACAAGAAGAGGAAACGAGGAGGAAGCTAAAAGAAGAAAAAGACAGGA ......x...:...........x:.x.xx:x..:x.x::...::.xxx.x.::...:.x....x.x...::::.:.x::.:......xx...::......:.x.x.:.. 109M 66/109 60.6% 109/94230402 0.0% 0/109 0.0% -62141853 -32088549 +3794 chr4 + 190214555 11068146 11068145 11068283 138 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAA--GAAAGAAGAAAGAAAGAAAGAAAACTAGT chr4 - 94230402 44053989 44053988 44054126 50176277 50176276 50176414 138 AAGAATGGAGGA--GAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGT .....x.:.:..--........::...:.::x......:x::.:.:.x:::xx.x:...........:.::x..::.x:.:x.x:..::......::..x..x.x....--.::x.:.x....:.......:.:.x:... 12M2D95M2I29M 84/136 61.8% 138/94230402 0.0% 4/136 2.9% -32985843 -61244559 +3129 chr4 + 190214555 11068167 11068166 11068224 58 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA .:..:x.:.:.......:...:..........:x:..:x....:...:...:.:.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 3356818 NA +3386 chr4 + 190214555 11068181 11068180 11068252 72 AAAGAAAGAAAGAAAAAATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....:....:.x...:..x::.::x:.....::..:.........x.::.x..::....... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -13998804 -80231598 +3272 chr4 + 190214555 11068184 11068183 11068280 97 GAAAGAAAGAAAA-AATGAAAGAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGA-AAGAAAACT chr4 - 94230402 67445497 67445496 67445595 26784808 26784807 26784906 99 GAAAAAGAGAACATAAAGAAAGAAAGAGAGGAAAGGAGGATAATACAGCTCAGTAGGAGAAATAAAAAAAAATGGAGAAACATTAAGCAGAATAAAACT ....:.:....x.-..x..........:.....:.:....x..x.x..xxx:::..:.....x...:.....x::....:x.xx..:x.-..x...... 13M1I75M1I9M 68/97 70.1% 99/94230402 0.0% 2/97 2.1% -56377313 -37853089 +3309 chr4 + 190214555 11068230 11068229 11068303 74 GAAAGACAGAAGAAAGAAAGAAAAAGAAAGAAGAAAGAAAGAAAGAAAACTAGTTCCTTAAGAAAGTAGTGAAT chr4 - 94230402 42895011 42895010 42895078 51335325 51335324 51335392 68 GAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTG------TGAGAAACCAGGAAAT ......x::.....:....:.........:..x.....:....x..:....:------.:.....x:..x:... 52M6D16M 52/68 76.5% 68/94230402 0.0% 6/68 8.8% -31826781 -62403621 +3033 chr4 + 190214555 11135338 11135337 11135417 80 TGTGTGTGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATGTGTATATATACATATATA chr4 - 94230402 81401294 81401293 81401373 12829030 12829029 12829109 80 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .:.x.x.....x.....x.:x:x:......:..:x.x:..:.....x......:.:....x:...x:....:x..:..:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -70265956 -23964446 +3176 chr4 + 190214555 11135344 11135343 11135399 56 TGTGTGTGTGTATGTGTGTATATATATGTGTATATATGTATGTGTGTATATATATG chr4 - 94230402 70982629 70982628 70982682 23247721 23247720 23247774 54 TGTGTGTGTGTATGTGTG--TACATATGTTCATAAATGTGTGTGCATACACACATG ..................--..:......x:...x....:....::..:.:.:... 18M2D36M 44/54 81.5% 54/94230402 0.0% 2/54 3.7% -59847285 -34383117 +3040 chr4 + 190214555 11135391 11135390 11135437 47 ATATATATGTGTATATATACATATATATATATTTTTAGTTAAATGTA chr4 - 94230402 52579774 52579773 52579820 41650583 41650582 41650629 47 ATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTA ...::.:.....:.:....:............x....:.x....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -41444383 -52786019 +3416 chr4 + 190214555 11140599 11140598 11140664 66 TCTTCTTCTCTTCTT--CTTCTTCTTCTCCTTCTTCTTCTTCTTTTCTTCTTCTTCTCTTCTTCTTCT chr4 - 94230402 27426816 27426815 27426883 66803520 66803519 66803587 68 TCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ..:.x......:...--..x..x.::......:.............:..:.::......x...:x... 15M2I51M 51/66 77.3% 68/94230402 0.0% 2/66 3.0% -16286217 -77944185 +11553 chr4 + 190214555 11155350 11155349 11156021 672 TCCAGAGAAAAAATAATTTCCATT------TAAAAGGTG---TTTTGACATTGATTAGTTGAGACTAAAGTCCCACATAACTCAACTGCTTGAAAATGAA--------GTCATAGCTAATGACTCTTCCTGGCTTCAGCCAAAGAAACATTG----AGCAGCGTCTAAAGAAACATCTGTCTTTTCATATGTATGAACAG---------------------------------------TTTTTGTTGTAAATCCTATAGGATTCTTGATATTCATTATGAAAGAAAATCCGTATGATCATTTTAAAGACCATCTGCTCAGGGTTTAGGATCATCACCTGGCTGGGCTTCCTGAAGCACTGTGTCCAAAAGGAACTAACAAACATGCTGTAAAAATTCATGCAACTTTGTTTTTTTCTTCAGCACCCCGCCTCCCCGATTAACAATGTAGATGCTTTTCTTTTCCCTTGATTGAAGAGTGATTCAGGAAG-AGCTGAAGTTTTTCTACTCCATTTGGGTGATTTTCCTCTCTTTGAAGTAACGCTACCTTAGAGCTAGAAACAATTTTTAGAGATCTAAAGCTGTGGCTATCAACAGTGGGAAATTTATTTT-TATCA--ACTCTTTTT-------TCTTCCCATTTGATATATGACTGGGCTCTTAAAAGTATCAGTTGAATC--AGCTGAATACCATGCAAAGGAATATGTGTGGAGTCATCAGCACCTTGTGATTAATACAA chr4 - 94230402 13173331 13173330 13174004 81056399 81056398 81057072 674 TCCAGATAGGGAAAAAGTTCAATTGAAGCTTAAAAGATAGCTTTGTAACACCGTCT-GTGGAGCAGGAAG----ATGTCCCTCAACT---TAGAAATAAAACCTTCCAGACATAGTTAA---------CTGGTTTCAT----AGAAGTATTGCCGAAGAAGCTACTGAAGAAGTACATTTATTTTTATATGTATGAGtagaatcacaaaattgtttgggttgaaagggacctAAGTGTTGCTTTATTATGAATCCTGGAGGATTCTTGAGATTCATTAGAAATGGGAATCTGCA-GATCTTTTTATCGGCCATCTGTTCCGGTTTTGGGGTTGTCACCTTGTTGGTTTGTGAGGAATACTGTGTTGAGTAGGAAATTATAAATACAATATTAAAATTTGTAGAA-TGTGTTTTTGT--------------------GATTAATAATGCAGATGAGTTTCTTTCCTCATT-TTAAAATCTGTTTCAGGAAACAATTGAAGTCTTTC-ATTCTATTTTGAAGATGTTTGTTTCTTTGAAGAAGGAGTAGTC---------------TTTCTGCAGATCT-AAGCTCTTGTTGACACCACTGATTAATTTACTCCAGATCAGGACCCATTTTCTTACACCCTCTTCACTTGATTTATTATTTCTCTTTTCAGA----------AATCTAACATGAACACCTCACAAAACACTATTTACAGAACTGTCAGCTTTTTGTGATTTAGACAA ......x.:::..x..x...x...------......:.:---..x.:...::.x:.-..x...xxx:...----.::.xx.......---.::....:..--------.x.....:...---------....:....x----....::....----..x...xx..:.....::.:x.x.x....:..........::..---------------------------------------x:...:..:.:......:x...........x........x:..x.::....:.:.-....x.....xx.:.......:..x..x...:..:.::......x.:...x:.x:xx.:.::.......:x.:x.....x.x.:...:.::x.:.x......::.:x..-.x.......x.--------------------......:....:.....xx.......:.:.x.x-..:..:xx..x........:-.::......:....-.:..:....x.:x...x..:x.:.........x.:x:x..x::---------------...:.:x......-.....x.x.:.:x..x..x..:xx......:.::-x....--..:.x....-------:..:::..:.....x...x.:.xxx..:..x.:.----------....--.xx....:...x::....:x.x...x.:::..::::.....x::........x.x.... 24M6I9M3I14M1D13M4D13M3D10M8I11M9D10M4D10M4I44M39I55M1D109M1D11M20D33M1D20M1I14M1D43M15D13M1D34M1I5M2I9M7I34M10D4M2I59M 410/601 68.2% 674/94230402 0.0% 144/601 24.0% -2017981 -92212421 +3737 chr4 + 190214555 11191743 11191742 11191870 128 GTCTTTCTTTCTTTCTTTTCTTCCTTTCCTTCCCTTTATCTTTCTTTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTT chr4 - 94230402 40218679 40218678 40218810 54011593 54011592 54011724 132 GTTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:....:..:x.::...x.:..::..::..x:.x:xxx..:...:xxx....xx:xx....x::...::..x:.x.x....----.x.:..:..........x............:...:.:. 90M4I38M 81/128 63.3% 132/94230402 0.0% 4/128 3.1% -29026936 -65203466 +3787 chr4 + 190214555 11191787 11191786 11191982 196 TTTTTCTTTCTT-TCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTTTCTTTTCTTTCCACAGAGTCTCACTCTTTTTGCCCAGGCAGGATTG chr4 - 94230402 79478396 79478395 79478587 14751816 14751815 14752007 192 TTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTT-TGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTTTATATTGC-----CAGAGGTTTTCTTACTTTCTCCAGAAATGCTTG ...::....:..-...::...x....:x:....x....::x...::.:......:.x-.::..:.....::.:..::.:.x.x...-.x.:..:::x::.:..:x:..:.:..:.:.x..x:..:xx...x..:...::x..xxx...:....x.x..x:-----.....x:.:x..:x:...x:....:x.x.x... 12M1I44M1I28M1D73M5D33M 113/190 59.5% 192/94230402 0.0% 8/190 4.2% -68286609 -25943793 +3026 chr4 + 190214555 11191793 11191792 11191923 131 TTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTC chr4 - 94230402 33162245 33162244 33162375 61068028 61068027 61068158 131 TTTTTTGCTCCTTTAAGATTTTTCTTTCCCACCTGCTTACTTTCCTTCTTTTTTTATCATTCATTTTTTACCTGTGATTTTTATTCACCCTGTTTCTGATTTCACTTTGTGCCTCTTCCTATGGCTTTTTC ...:..x..:::..x:xx.:........::x.:.x...x.....:.........:x.:x..:x...x..x.:.x:xx.:...x..::::::x..::.xx....x..:.x.x::....:..x.xx:::.... 131M 75/131 57.3% 131/94230402 0.0% 0/131 0.0% -21970452 -72259950 +3359 chr4 + 190214555 11191808 11191807 11191920 113 GTTTCTTTCTTTCTTTCTTT-----------CTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCT--TTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCT chr4 - 94230402 43081899 43081898 43082024 51148379 51148378 51148504 126 GCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:.:...:...x.x...:-----------.:.:....:::.:........:..x::..::..x.:::x:..:xx....xx::....--........:...........x.xx:.::.....:.. 20M11I57M2I36M 73/113 64.6% 126/94230402 0.0% 13/113 11.5% -31890091 -62340311 +3312 chr4 + 190214555 11191823 11191822 11191904 82 TCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCT chr4 - 94230402 53118144 53118143 53118225 41112178 41112177 41112259 82 TTTATCCTCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT .:.x..:.:....x..:::.x.x.::..........:.:.x.xx..:..:.x........x...x..x.......::.::.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -41926321 -52304081 +3394 chr4 + 190214555 11191866 11191865 11191940 75 TCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTCTTTCTT chr4 - 94230402 53118151 53118150 53118225 41112178 41112177 41112252 75 TCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT ..:..:x....:...x.::..........x...x.xx..:..:.x....x..:x...x..x......:.....:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -41926285 -52304117 +3019 chr4 + 190214555 11192914 11192913 11192969 56 AAAGAAGGAAGGAAGGAAGGAAGGGGAAATGGGAGGGGAGGAGAGGGGAATGAAAG chr4 - 94230402 65813802 65813801 65813857 28416546 28416545 28416601 56 AAAGGCGGTTGGGGGGGGGGAGGGGGAGATGAGAAGAGAGGATGGGGGGATGAAAG ....:x..xx..::..::...:.....:...:..:.:.....x:....:....... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% -54620888 -39609514 +10451 chr4 + 190214555 11197485 11197484 11197900 416 CCCGTAAAAATTCTGCATTAAACTGGGCATATTAGTAATGTT-TCTGTTGATCATTTGTTTAAAAATTTCAAAGAGAA----ACTTTTTTGTTTAAATAATCCATGAATTAGCAGGAAAGAAAAGAACATGGATTTTTAAAATTAA---ATCTGTCAAGAAAATGTATAGATGCTCATGTTATGGATTAATACCTCTGGTATGCTAATTGTCTTATTCTCTTGTGGTCCCCAAGAACATGGAGATTATTGTATCTAATACAGAAGCATGTGTGATTATCTGCAAAGTGTTCCCAGGTGCCCAGTAAGGTCGGTTAATAAC-GCATGGTGTGAACGGAGCACAGCGGTGAGAAATGGTGTGTGTCTGTC-TTCCAGGTTAACTAGGCTGCAAGGAATCATTC------------TCCAAGACAGGCTCTGTTTTGCTTT chr4 - 94230402 13180669 13180668 13181095 81049308 81049307 81049734 427 CCAATAAAAATTTCTCTATTCCTTGGGAGTTTTAGAAGTTCTGCCTGTTTGTCATTTTT------ATTTTAAGTAAACCAGCAGATCTTTGATTAAATAAGCAATGATTTAAGGCAAGCAGAAAGAATAAGACTGTTTAAAAATAATAAATCAACCAAAAACATGCAGACAAGTT----TTATGAATTCATATTTGTGATATATTAATTGATGTACTCTCTCATGGATTTCAAGAACATGCAGATTATTCTATCTGAAATGAAAGCATGTGTCATTATCT-CAAAGAATTCCCAGAAGCTCAGTAAGGGTGCTTAATGACAGCATAGTGTGAATGTGAAGCAGCTGTGAATAGGTATTTAATACTATCACTCTAGGCTGACAGTGTGACAAGAATTAGCTAGATCTGAATATGTCCAAAACATTTTCTGTTTATTTTT ..x:........::x.xx.xxx:....x:.x....x.:.x:.-:.....x:......x.------....:..:x.:.x----.xx.:....x........x.x....x...:x:x:.:x::......:.x.:x.x.......x...---...x::...:..x...:.x.x.x.:.----.....:...x...::.x..:...::......x:x..:.....::...x:::..........x........x.....:.x.:::..........x.......-.....x:.......:x..:........x:.x.....:..-....:.......:.x::x:....x....:x.:xx:.x.:xxx..:..-:..:...:.:..x:x.:x:....:.x.x::.x------------.....:...xx:.......xx:... 42M1I16M6D13M4I64M3I26M4D101M1D39M1I47M1I32M12I25M 268/405 66.2% 427/94230402 0.0% 33/405 8.1% -1983184 -92247218 +3017 chr4 + 190214555 11215512 11215511 11215545 34 AAACAACAACAATAGCAAAAAAAAAAAAAAAAAA chr4 - 94230402 51831518 51831517 51831551 42398852 42398851 42398885 34 AAACAACAACAACAGCAAAAAAAAAAAAAAAAAA ............:..................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -40616006 -53614396 +3063 chr4 + 190214555 11255098 11255097 11255164 67 GCTGTATAACCTTGGGCAAGTTACTTAACTCCACTATGCCTTAGTTTCCTCTTCTGTAAAATGGTAT chr4 - 94230402 42976382 42976381 42976448 51253955 51253954 51254021 67 GTTGGGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGAT .:..x:.:.:.:..x.:....:....x..::.x:x.x.....x.......:.....x.......x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -31721284 -62509118 +3641 chr4 + 190214555 11260687 11260686 11260769 83 CTGCAGCCTCTGCCTCCCGGGTTCAAGTGATTCTCATGCCTCAACCTCCTGAGTAACTGGGATTATACATGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:.....:xx:x..:.:...........x...x..x.x....:...::::....:....:.:..:..:....--....::.. 73M2D8M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -6936439 -87293963 +3109 chr4 + 190214555 11262845 11262844 11262905 61 GAAAGAAAGGGAGAAAAAGAAGGAAGAGGGAAAGGGAGAAGAAAGAAAAAAACAGTTTATA chr4 - 94230402 19799669 19799668 19799729 74430674 74430673 74430734 61 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGACATTATA .....:..::....x.::.....::.....:...::.:.:....:......:x.xx..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -8536824 -85693578 +7534 chr4 + 190214555 11275630 11275629 11275949 320 TTTTACCAAAGTCATTATCTCTTTAATTTGCTCCCTGGGATGCTTGCTCACAAATAAGTAGCACCCGCAAGTGGGATGGAGCCTGCTTTCATCTGCTTTCTATTTTAAAATGTATTTTTTTCTTCTTGAGGATGATAGTTATATTGACAAATCT-TCCATATGGGAT-AAAGTGTGTGCATCAGATTCATCAAGGATTCCATTAAAGCTCTGCCAGTGAGGTCAGT--TACCCAGCAAAGCATGATAATGGATTTGGTTTCAATAGACCAAGTATTCAAATTCAGGTGAAAGCTGGCAGACAGGCAATTAATATTTTACACAGA chr4 - 94230402 13195418 13195417 13195711 81034692 81034691 81034985 294 TTTTCCTGAAGTCATTATTTCTTTAATTTCATTCTTGAGATTTTTTT---CAGGGAAGTA-TATCTAAATTTGTAATGTTGCATGCAGTATTCTGTTTGCT--------------------------GAAGGCAATCATTCTCGTGATAAATTTGTATGTGTGGGATGAAAATATGCACATCAGCTTCATCAAGTATTCCATTAAAATTGGGCCACAGAGCTCAGAGATGCACAGCAAGGTGCAGTGGTGAATTTATGTTGAATTGCACAAATATTTGGGTTTAGATGCATGTTGGCAAGCAATCAATTAATTTTATAAACTGA ....x.::..........:..........xx.:.:..:...x:..x:---..::x.....-:.:.::x.xx..x:...xx..x...xx.xx....:..x..--------------------------..:.:::..x:..x.xx...:....:.-.x::.:......-...:.:..::......x.........x...........::.xx....xx...x....x--.:.x......:.:::::.::..:....:xx..x...x.xx...:....::::..:..:..x.x.:.....::..:x........x..x..x..x.. 47M3D10M1D40M26D27M1I12M1I58M2I96M 191/290 65.9% 294/94230402 0.0% 34/290 11.7% -1919788 -92310614 +4335 chr4 + 190214555 11287949 11287948 11288057 109 AACAAGGATCT-TTCATTTTCATAGCAATTCTATGAAGTAGGTACAATTATTATAACCTCCATTTGACAGGTGAAAAAGCTGAGGCACAGAGA-GTTAAGTCACTTGTTCA chr4 - 94230402 10729149 10729148 10729257 83501146 83501145 83501254 109 AACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ....:.:..:x-..:.x::...:.::.x::..:...:.......--....:...x.x........x.......::...:..........x.x.-.......x.:...::.. 11M1I32M2D47M1I17M 78/107 72.9% 109/94230402 0.0% 4/107 3.7% 558800 NA +3011 chr4 + 190214555 11292975 11292974 11293018 44 GGTTTTTTTGTTTTGTTTTTTTTTTTTTTGTAATTTTTGTATTT chr4 - 94230402 85583189 85583188 85583232 8647171 8647170 8647214 44 GATTTTTCTGTTTCTTTTCTTTTTTTTTTTTAATCTTTGTATTT .:.....:.....:x...:..........x....:......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -74290214 -19940188 +3740 chr4 + 190214555 11295039 11295038 11295105 67 CTATAACCTCTGCCTTTTAGGTTCAAGTGATTCTCATGCCTCAGCCTCTCAAGTAGTTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ...:.:..:xx:x...:.:..........x...x..x.x........:........:...:...... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -6902087 -87328315 +4081 chr4 + 190214555 11296366 11296365 11296521 156 TTCCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCTTCCTTCCTTTTCCTTCCTTCCTTCTTTTCTTCCTTCCTTCCTTCTTTCCTTTCTTCCTCCCTCCTTTCCTTT-----TTCTTTTTCTTTCTT chr4 - 94230402 32363144 32363143 32363301 61867102 61867101 61867259 158 TTCTCATTCCTTCATATCTTT---TCCTGCTGCCCTTTTGTCTCAGTGTCTCTGGGCCTTCCTGCCCAGACCTCCCATCTTCTTCCTGCCTTCTTATCTTCCTTCCACTTCTGATTTCTTCTCGCCTAGCTCTCTACTTTTAGACATGCTTTTCCTTTTCT ...:.x...:.....x.....---..:.x..x:.:..:.x...:xx.x.:...xxx.:.:.:.x.::xxx...:..x.:.:......x.......x..........x::::.xx..:...:::x...xx...::.x.:...-----.x.....:....::. 21M3D117M5I15M 97/153 63.4% 158/94230402 0.0% 8/153 5.2% -21066778 -73163624 +3716 chr4 + 190214555 11296484 11296483 11296571 88 TTTCTTCCTCCCTCCTTTCCTTTTTCTTTTTCTTTCTTTCTTTCTTCCTTTTTCTCGCTCTCCTTCTCTCTTTCTTTCTTTCCTTCTT chr4 - 94230402 45185594 45185593 45185681 49044722 49044721 49044809 88 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCT ....:::..:...xx.:..xx......x:...x..........::.:::x...:..:.::.:.....:.....xx:....:....::. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -33889110 -60341292 +8260 chr4 + 190214555 11338070 11338069 11338196 127 TGCTCAGCTCAACTCTCTAATTACTGTCATGCTGATGGAGGTTAAATATTTATGAAGAATGCGCTTTTTATCACCCAATCTAATTTTTAAACTCAGATTTTCTGATCTCATTGAGATGTTAATAACC chr4 - 94230402 13216712 13216711 13216838 81013565 81013564 81013691 127 TACTGAGCTCCACACTATAATTACTGTCATGCTGAAGAAGGTTAAATATTTATGAAGAATGTGCTTTTTATCATTCAGTCTAATTTTTAAACCTGAATTCTGTAATTGCATTGAAATGCCAATAATC .:..x.....x..x..x..................x.:.......................:...........::..:..............::::...:.x.:..:x......:...::.....:. 127M 103/127 81.1% 127/94230402 0.0% 0/127 0.0% -1878642 -92351760 +3064 chr4 + 190214555 11343136 11343135 11343194 59 CCATTTGTTTCTCTAATAGTCCTGTGACACCAATATTTAATTTTCTCACTGAGGATATT chr4 - 94230402 27776630 27776629 27776688 66453715 66453714 66453773 59 CCATCTGTTGCTGCAAGAGTCCTGTGACTCCAGTGTTTAATTTTTCCTCTTGAGCTATT ....:....x..x:..x...........x...:.:.........::.x..x::.x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -16433494 -77796908 +3406 chr4 + 190214555 11345987 11345986 11346083 97 GCATGTGTATACATATATACATATGTGTACACCTATATATACATATGTATAC----ATGTGTGTATACATATATGTATATACATGCAGATATACATGTACA chr4 - 94230402 73121109 73121108 73121209 21109194 21109193 21109294 101 GCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ....:.x:.....:.......:.x:x.:.::xx..:...:::...x...:..----..:....x:........x:..:::x..::x...:.:.......:. 52M4I45M 63/97 64.9% 101/94230402 0.0% 4/97 4.1% -61775122 -32455280 +3534 chr4 + 190214555 11354933 11354932 11355032 100 TTCAAATAAATCAAAAGAGGTACCCATATAGGAGTGGCATTTTTTGTGTGTGGTTTTTTTTTGTTGTTTTTTTTGTTTTGTTTTTTTGTTTTTTTTTTTG chr4 - 94230402 75733699 75733698 75733788 18496615 18496614 18496704 90 TCCAAGGAGGTCAGAAAAAGTTCCTTTCCAGCAGTA-------TGGTGGTGGGTTTTTTTTTGTTGTTGTT---GTTTGGTTTTTTTGGTTTTTTTTTTG .:...:x.::...:..:.:..x..:x.x:..x...:-------.x...xxx.................x..---....x.........x........... 36M7D28M3D26M 68/90 75.6% 90/94230402 0.0% 10/90 11.1% -64378766 -29851636 +3413 chr4 + 190214555 11354945 11354944 11355017 73 AAAAGAGGTACCCATATAGGAGTGGCATTTTTTGTGTGTGGTTTTTTTTTGTTGTTTTTTTTGTTTTGTTTTT chr4 - 94230402 38372627 38372626 38372699 55857704 55857703 55857776 73 AAAGGAGGCAGAGCTAATAGGGTAGGGCTGGTTGTGTGTGGGTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTT ...:....:.xxxx..xx:.:..:.x::.xx..........x.....x........x................ 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% -27017682 -67212720 +3448 chr4 + 190214555 11361152 11361151 11361258 107 GCCTAATGATGAGGAAGAAGATGGAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAAACAGTGCCAGAAAACAAATT-----GACATTAGATAATCTG chr4 - 94230402 20777430 20777429 20777525 73452878 73452877 73452973 96 GCCAAATCTTGAAGAA--------AGCAAAACAAATCAATCAATCAAACAAACAACAACAACAAAAACAGA--------AGAAAGCAGATTACATGACCATTAGTTAATTTG ...x...xx...:...--------.:x........x...x...x....................x..x.:.--------.....:..:...-----:x......x....:.. 16M8D47M8D12M5I16M 73/91 80.2% 96/94230402 0.0% 21/91 23.1% -9416278 -84814124 +3492 chr4 + 190214555 11361169 11361168 11361236 68 AAGATGGAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAAC--AAAAAAACAGTGCCAGAAAA chr4 - 94230402 18021875 18021874 18021944 76208459 76208458 76208528 70 AAGTGGGAATGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAA ...xx....x::.x..:..x..:x........................--..........x.xx...... 48M2I20M 55/68 80.9% 70/94230402 0.0% 2/68 2.9% -6660706 -87569696 +3035 chr4 + 190214555 11361170 11361169 11361219 50 AGATGGAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAA chr4 - 94230402 68691686 68691685 68691735 25538668 25538667 25538717 50 AGCTGGAGAAAATAGACAAAAGCAAACAAACAAACAACAACAACAAAAAA ..x....:....xx:.x.x..:........................x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -57330516 -36899886 +3015 chr4 + 190214555 11361172 11361171 11361225 54 ATGGAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAAACA chr4 - 94230402 21619668 21619667 21619721 72610682 72610681 72610735 54 ACAGAAGAATTTAAAACAAACAAACAAACAAAAACCAACAACAAAAAACAGGCA .::...:..xx:....................x.x.........x...x.::.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -10258496 -83971906 +3101 chr4 + 190214555 11361175 11361174 11361235 61 GAAAAAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAAACAGTGCCAGAAA chr4 - 94230402 20093816 20093815 20093876 74136527 74136526 74136587 61 GAAAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAACCCCCGCTAACAA .....x..xx...........x..x.x........:............x.xx:..:.:x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -8732641 -85497761 +3023 chr4 + 190214555 11361179 11361178 11361226 48 AAAACAAAACAAACAAACAAACAAACAACAACAACAACAAAAAAACAG chr4 - 94230402 36775550 36775549 36775597 57454806 57454805 57454853 48 AAAACAAAACAAACAAACAAAAACACCCAACCAACAACAACAAAACAG .....................x.x..xxx.x.........x....... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -25414371 -68816031 +3246 chr4 + 190214555 11361185 11361184 11361227 43 AAACAAACAAACAAACAAACAACAACAACAACAAAAAAACAGT chr4 - 94230402 89474250 89474249 89474292 4756111 4756110 4756153 43 AGAGAAAACAACAAACAAACAACAACAACAACAAAAAAACAGT .:.x...xx.................................. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -78113065 -16117337 +58287 chr4 + 190214555 11398575 11398574 11400057 1483 AATCTTACAATCCAAGTAAAAATAAATCTGATGATCACAATGAGACATTAAAAATTAAAAAGAGCAATGCAGAAAGGAGAGGGGAGAGAGAGGATTGTAATAGCCATGAAAAACATGTTTTTTTAAGTAACAAAAGAATTTAGATTTTGCAATGATTGCAACA--CAGACAGCTATTTTGAGTTGGGGGCAAGTTAATTA------TATTCAAAAAAACATAGCGTCTCCAGAAAAAATCTTTTTTTTTTTTTCAGTGAAATAGTTTAGTTCCTTCATATAGAGACATATTACACAATGTTAACAACCATGAAAAACAATACAAAATGCCCTCCA-TTTAACAAGTAGAAAAATATAACTAGTATATATGGCAATTGTGAATCTAATACTGTACAGAAGTACTTTATGGATTTT-ACAAATAAATTATACCTTAAATGCTTTTTTAAAATTCTTTTTCCCCTCAGATGTACACCAGAACTTACAGTAGGAAAGTTTCTGAGCTTAGCTTATTGCAAATCAGTGCCAGTCAAATGTTCTGCCAACAAGCTCGAAGAACTTCTTATTTGGCTCATGAAAATATTCGTGCAGTTTATTGAGTAGTTTGGGATCGACTTGGGGGTGCGCCCGGCCTTTGGACTCATGTAAGCAGCGGTCCCGGCCGCTGTCCCGCAGGCAGTAAAAGCCCTTGGTTTTGTTAAAGTAGAAGTTCGAAGCATTGATCTGCGGCGACAGCTTTAGGAACCTCTCGACCTTTTGGATCTCAGGGAAGGGGTCCCTGATGAGGCGGTCGCCGTCCACAATGTGGATGTGGCGCAGCGGGAAAAAGCGCAGCCAGTTCTGCATGTGCACGTGGTAGAGGCTGCGGTTGAGGGCCTTGTAGTCCACATTGAGCCTGCCATCGCGCACCAGGAACTCCTCGATGGACGGGTAGGGCTTGTGCTTCTGCATGTGGTTGTAGAACACTTGGGTGTAGTCAGATAGCACGCGCTCCGACGGGTCTCGCAGGATGAGCAGCAGCCGGATGGACGGGTTCATGCTGTAGACTCGCTCAGGCACTTTGGGCGACGTGAAATACGCGGGGGTCTTCTCCACTGTGAGCTGGTGTGGCCAGGAGAAGGGCATCTGGCTGAGGTACCAGCCCAAGCCGTGGCTGTAATGCTCCTCCCAGTCGAAGAAGTGGACCTCGTTCTCCGCGGCCGCCACGTCGGGGTGCAGGCTGAGCATCTCCAGCAGTGCGCGCGTGCCGCCCTTGCGCACGCCGATGATGATGGTCTGCGGCAACTGCTGGGCAGAGCCGTTTGGGGCCACGCCATCGCGGACGTCATCCTGGAGGGTCCCCGCTTTCCGCAGAAGCTCCTGCTGGCCTAGCT---------------------------CGGCGGGGCGGGAAGGCACTAGCTGGGGCTGGGCCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATGCTGGA----CACCACGGTGGCTTCACTGGGCCGCGCGCCGCTGGGTCATGAAGTG chr4 - 94230402 13231673 13231672 13233163 80997240 80997239 80998730 1491 AATTTCATAAACCAGGATAGAACAATTTTCA-AATTACAAGAATATTTTCAGA--TAAAAAGAAATTATTAGACCACAATTTAGAGCAATAGAAGTGGAAATGTAAAGTTTAGCATATCCATT--AGCAACTAGAGAAT--AAAGTTCAGAAAGATTGAAGTATTCAAATAATTCTGAAGGGTTTTGTTGAAATGAATTTCTTATTTATTAAAAAGACAACACATTCTCAAGAGAGCATCTTCTG--------CAGTGAAATAATTTACTTTCTTCATATAGACACATCATACACAATGTTAACAACCATGAAAAACAATACAAAATGCTTTCAAATTTAACAAGTAGAAAAATATAACTAGTATATATGGCAATTGTGAATCTAATACTGTACAGAAGTAATT-ATGAATTTTTACAAATAAATTATAGCTTAAATGCCCTTTTTAAAGTTTCT--------AAATTTACACCAGAACATAGGTTCTCACATTTACCA---CTAACTTGCCACAGATGAGTGCCAGTCAAATGTTCTTCCAACAAGCTCAAAAAATTTCTTGTTGGGCTCATAGAAATACTCATGCAGTTTCTCAAGTAACCGAGTATCTACTTGTGGGTGAGCTCGTCCTTTTGACTCGTGTAAACAGCGCTCCCTCCCACTGTCCCTTAGGCAGTAGAAGCCTTTAGTTTTATTGAAATAAAAGTTTGAAGCATTTATCTGTGGTGATAATTTCAAAAATCTCTCTACCTTCTCTATTTCTGGAAAGGGATCTTTGATTAGTTTATCCCCATCTACAATGTGGATATGATCAAGGGGAAAATACTTCAACCAGTTCTGCATGTGAATGTAGTATAAGCTTCTGTTTATTGCCTTGTAGTCCACATTGAGTTCACCATCTTTAATCAGGAACTGTTCAATGGAGGGATACGGCTTGTGCTTTTGCATGTGGTTATAGAACACTTGGGTGTAATCTGACAGTACTCTCTCACTTGGGTCTCTTAAAATAAGGAGTAATCTCATAGATTGGTTCATGTTATAAACTCTTTCAGGCACTTCAGGTGATGTGAAATATGCTGGAGTTTTTTCCACTGTGATCTGATGGGGATAAGAGAATGGCATTTGATTAATATACCATTGCAATCCATTTCTATAATGATCTTCCCAGTCAAAGAAGTGGACTTCACTTTCTGCTGCTGCAATATCAGGATGAAGACTCAGCATCTCCAACAAAGCTCTTGTTCCACCTTTCCTCACTCCAATAATGATAGTCTGTGGCAGCTGCCGGCATGATCCATTAGAATGAATGTTTTCCTTGAAGTCATTTTTCTGAG---ATGTTTTCTTTAAAAGCTCTCTCTGAGCAGACTGAGCAGAAGTCTCAGCCTTTGAATTTATAGCCGGTCTAGAAGGCACTATCTGAGGTTGAACAATGAGCAGCACAGCTCCCAGCAGAAAAGCTGCCATGACAGAACTTCTTTAGTCTGGTTTCACTCAAGCA---GGTAATGGGGCATGGAGTG ...:.:.:..x...:.xx.:..:..x.:.x.-:..:....x:.x.:x..x.:.--........:xxxxx:...xx:x.:xxx:...x:.x..:.x..x..xx.:x.x.xxx.:...:.::x..--..:...x.:.....--.:.x..::x..x.....x.::.--..:.:.::.x.xxx.:...xx.xxx..:.x....x------....x....:.xx.:.xxx....x...:.:x.....:.x--------..........:....x..:...........x....xx.......................................::..x.-.................................................................x..-...:.....-..............x.........::....x...x.:.:.--------.:..x...........x..x:x.xxx.x.x..x.::---:..:...::::..:..x...................x...........:..:..:.....:..x.......::.....:..:........x.::....:::x:.x...x.....x.....x..:..x.....x.....:.....:.....x....xx..:.......x:........:.....:..:.....:..:..:..:.....:........x.....:..:..:.::..:.::..:.....x.....:.xx..:..x..:.....:..::....x..x:x:..x..:..:...........:..::xx..x..:...x.x:x..:...............x.:..:...x.:...x.x...x.xx....................::::.....x:xx.:........x:..:.....x..:..x...........:...........:.................:..x..:..:..x.x...xxx:.......x:.::..:..x..:.::.xx..:..:x........:.:..:....x:..........::..:..:........:..x..:..:..:..........x...:..x..x:.:.....x.....:..::.:.x:.....x:x...x..:.xx..:.....x..:........:...........:..::.:..:..x..:..x.::..:..:..x..:..x..........:..:x..x.x:..x..:..:..x.x...x..:..:.....:.....:....:....:..xxx..x..:..x.::xxx.:.::x..x:x..x.....::.xxx.:.---x:.:....:x:.:......::x...:x.x::..---------------------------::..x..x.x:..........x...:..:..::.x.:x........x..x.....x..x.:x..x......x::..----.x::.xxx...:......x::x.:---.x::x....x....:.... 31M1D21M2D68M2D14M2D22M2I35M6I39M8D82M1I68M1D9M1I40M8D36M3D833M3D33M27I76M4I24M3D19M 1026/1450 70.8% 1491/94230402 0.0% 74/1450 5.1% -1833098 -92397304 +3013 chr4 + 190214555 11454895 11454894 11454978 84 AAGAAAGAGAAGGAGGAGGAGGAGGAGAAGGAGAAAGAAGGAGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 88922047 88922046 88922130 5308273 5308272 5308356 84 AACAAAGAGAAGTGGAAGGAGGGTGGAAAGAAGCGAGCCTGGATGGGCAGAGAGGCAGAAAAGGAAAAAGCACAGAAAGAAAAA ..x.........x:.:......:x.::...:..x:..xxx.::x:.:x:....:.x....:.:...:...x.x.::.....:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -77467152 -16763250 +3041 chr4 + 190214555 11454903 11454902 11454975 73 GAAGGAGGAGGAGGAGGAGAAGGAGAAAGAAGGAGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 44400495 44400494 44400567 49829836 49829835 49829908 73 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGA ..:.....:..:..::........:.:.::.::.:.....:..:.x..:x..:..x...xx:x....:.x.:. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% -32945592 -61284810 +3884 chr4 + 190214555 11467092 11467091 11467216 125 TATACATATATATATACACACATATACACACACATATATTTACACATATATGTGTATATATATGTATACACATATATATGCATATATACACACATATATACACATATATACACATATATACATAT chr4 - 94230402 73121102 73121101 73121224 21109179 21109178 21109301 123 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATAT--AAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .:.:...::....x:.:.............x.x::..:xx....:.::...:x...:.::x:.:...:::x:..:....--.x...::.x....x.x.:......:....x:..x..x.x.x... 79M2D44M 78/123 63.4% 123/94230402 0.0% 2/123 1.6% -61654010 -32576392 +3019 chr4 + 190214555 11467096 11467095 11467166 71 CATATATATATACACACATATACACACACATATATTTACACATATATGTGTATATATATGTATACACATAT chr4 - 94230402 7055388 7055387 7055458 87174945 87174944 87175015 71 CATGTATTTCCACGCACGCACACACACACATTAAGTTACACGTATTTTTTCATACATGTGGACTCACACAT ...:...x.x:..:...::.:..........xx.x......:...x.x.x:...:..:..x.:x....:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 4411708 NA +4282 chr4 + 190214555 11467114 11467113 11467253 140 TATACACACACATATATTTACACATATATGTGTATATATATGTATACACATATATAT----GCATATATACACACATATATACACATATATACACATATATACATATATATACACACACA----CACACATATATATATATATATCCT chr4 - 94230402 73121075 73121074 73121221 21109182 21109181 21109328 147 TGTACACCCACAGAAACTGTAATCT-CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCT .:.....x....x.x.:.xxx.:x.-::....:..::....x:...........:.:----....:x:....:..:....x::...::x:..:.::.:x:........x....:.x....----.......:....x::.x..x.... 25M1D31M4I59M4I24M 93/139 66.9% 147/94230402 0.0% 9/139 6.5% -61653961 -32576441 +3422 chr4 + 190214555 11467160 11467159 11467249 90 CACATATATATGCATATATACACACATATATACACATATATACACATATATACATATATATACACACACACACACATATATATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCC------TACATTAATACACACACACACACACAGACACAAATGAATA ..::.:.:....::.::...x...::...x....:..:...:.x------.....xx...:...............x.:.:.x..:x... 44M6D40M 59/84 70.2% 84/94230402 0.0% 6/84 7.1% 3071373 NA +3161 chr4 + 190214555 11467162 11467161 11467229 68 CATATATATGCATATATACACACATATATACACATATATACACATATATACATATATATACACACACA chr4 - 94230402 7596412 7596411 7596479 86633924 86633923 86633991 68 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ....:.x.......:.x.:::.:...:.:..:...:......x.:......x..:::.::...:.x.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 3870750 NA +3033 chr4 + 190214555 11467172 11467171 11467234 63 CATATATACACACATATATACACATATATACACATATATACATATATATACACACACACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ....:.x.::..:.:.x..::.:...:.:..:...:......x.:......x:..:...:... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 3870760 NA +3073 chr4 + 190214555 11467181 11467180 11467243 63 ACACATATATACACATATATACACATATATACATATATATACACACACACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x.........:..:::x..::x.::.:.x.....::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -6053568 -88176834 +3047 chr4 + 190214555 11468487 11468486 11468574 88 TATATATATGTATATATATATATACGTATATATATATATATATATATATACGTATATATATATGTATATATATATATATACGTATATA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ......:x::.xx...:...x...:..::..:x......x..x:...........xx.x.x.xx.x.::.:..::.x....:...... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -1334299 -92896103 +3103 chr4 + 190214555 11468523 11468522 11468618 96 TATATATATATATACGTATATATATATGTATATATATATATATACGTATATATATATATATGTATATATGTATATATATCTTTATATAGAGAGAGG chr4 - 94230402 71926809 71926808 71926904 22303499 22303498 22303594 96 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATATTCCTTATGGTAGGAAAAGG .........x.:.:....:...:.x....x.:......x...x.:xx..:....x.::..::..xx.x.:x.x....x:...xxx:...::.:... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% -60458286 -33772116 +3296 chr4 + 190214555 11468525 11468524 11468596 72 TATATATATATACGTATATATATATGTATATATATATATATACGTATATATATATATATGTATATATGTATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x.....x.::..:..:........:...:::.:....xx.....x.:x.......:.:.x.:.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -41012711 -53217691 +3302 chr4 + 190214555 11469850 11469849 11469906 57 TCTCTTTCTGTGTGCGTGTATATGTATGTATATGTATATGTATATGTATATGTATAT chr4 - 94230402 66471234 66471233 66471290 27759113 27759112 27759169 57 TCTCTTACTGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT ......x...............::.:::....:::......:.x....x..::.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -55001384 -39229018 +3006 chr4 + 190214555 11486267 11486266 11486320 54 TGTCATTTTCAGTTGAAAAAAAGTCTTACCAGTTATAAATAATAATAATCTATT chr4 - 94230402 68191882 68191881 68191935 26038468 26038467 26038521 54 TATCATTTTCAGGAGAAAAAAAGCCACAACAGTTACAACTGAAAACAATCTATT .:..........xx.........:.x:.x......:..x.:.x..:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -56705615 -37524787 +3296 chr4 + 190214555 11531644 11531643 11531701 58 TGACAAAGCAAGACTCCATCTCAAAAAACAAAACAAAACAAAAAACAACAAAAAAAAC chr4 - 94230402 31015330 31015329 31015385 63215018 63215017 63215073 56 TGATAAATCCAAAT--CATCCTAAAAAACAAAACAAAACAAACAACAACAAAAACAAC ...:...x.x.:.:--....::....................x...........x... 14M2D42M 47/56 83.9% 56/94230402 0.0% 2/56 3.6% -19483686 -74746716 +3317 chr4 + 190214555 11532479 11532478 11532555 77 TGCTGGTTTTATATATATATATATATTTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTTGTTT chr4 - 94230402 72617487 72617486 72617563 21612840 21612839 21612916 77 TACAAGTTGCATATGTATATATTTATGAAATGCTTGTGTTTGTTGTTGTTGTTTGTTTGTTTGTTTCAGTTCTTTTT .:.x:...x:....:.......x...xxx:.xx....xx.......................xx..:x...:.x... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% -61085008 -33145394 +3094 chr4 + 190214555 11532504 11532503 11532560 57 TTTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTTGA chr4 - 94230402 33381020 33381019 33381072 60849331 60849330 60849383 53 TTTTGTTGTTGCTGCTATTGTTGTTTTTTGTTGG----GTTTGGTTTTTTTTTCTGA ...........:..:.:........x......x.----....x.....x....:... 34M4D19M 45/53 84.9% 53/94230402 0.0% 4/53 7.5% -21848516 -72381886 +3229 chr4 + 190214555 11532507 11532506 11532558 52 TGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTT----TGTTTTTT chr4 - 94230402 2688648 2688647 2688703 91541700 91541699 91541755 56 TACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTTAAATGTTTTTT .::..x.x.........................x.x........----........ 44M4I8M 46/52 88.5% 56/94230402 0.0% 4/52 7.7% 8843859 NA +3900 chr4 + 190214555 11540635 11540634 11540708 74 TCAGGAGTGTCCAATTTTTTGGCTTCCCTAGGCCACACTGGAAGAAGAAGAATTATCTTGGGCCACACATAAGA chr4 - 94230402 9885856 9885855 9885929 84344474 84344473 84344547 74 TCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ......x.:.....::..:..x.......::......x..::x...x.:......:..x....::..:x..... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 1654779 NA +3017 chr4 + 190214555 11552467 11552466 11552528 62 CTCTGTCTCTCCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAATTAATTAATTAG chr4 - 94230402 56471728 56471727 56471789 37758614 37758613 37758675 62 CTCTGTTTGTTCAAACACAAACAAAATAAAAAACCAACAAAAAGAAATAAATAATTAAATAG ......:.x.:....x.x...x....x.....:xx..x.........x..x.......x... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -44919261 -49311141 +3277 chr4 + 190214555 11565786 11565785 11565884 99 TATATATAGTATATATAC-TATATATATACTATATATATACTATATATATACTATATATATATACTATATATATATACTATATACATATATATATATATA chr4 - 94230402 3024333 3024332 3024432 91205971 91205970 91206070 100 TACCCATAATAGATTTACGTAGAGATATATGCTATATATACTATATATATAGTTTATATTTTTTATCATCAAATCTATTACATATCTATGTATACGTATA ..:x:...:..x..x...-..x.x.....:xx...................x.x.....x.x.xx.xxx:.x..x..:..:...:x...:....::.... 18M1I81M 69/99 69.7% 100/94230402 0.0% 1/99 1.0% 8541453 NA +4024 chr4 + 190214555 11599721 11599720 11599860 140 TAACAGATATATGAAATATATATGTATATATATGTAAACATACATACTACACCATATGTCTGTGTATGTGTGTGTATATATATATACATATATATA--------------------------------TACACACGTATATA--TATATGTATATATATATATATACACACACA chr4 - 94230402 40224617 40224616 40224790 54005613 54005612 54005786 174 TAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACA ..:..x..:...:..::xx...:x....:........x:x.x::.:.x...xx.:.x:.:.x...:...........:........x...:....:--------------------------------.......:..x:..--..x....xxx.:.x.....:.x:....... 96M32I14M2I30M 97/140 69.3% 174/94230402 0.0% 34/140 24.3% -28624896 -65605506 +3319 chr4 + 190214555 11599789 11599788 11599867 79 TGTGTGTATATATATATACATATATATATACACACGTATATATATATGTATATATATATATATACACACACACACACAC chr4 - 94230402 8395789 8395788 8395859 85834544 85834543 85834614 71 TGTGTGTATGTGTGCATAAACATGTATTTACA--------TATGTATGCCTACATTAATACACACACACACACACAGAC .........:.:.::...x.:..:...x....--------...:....:x..:..xx...:.:.............x.. 32M8D39M 54/71 76.1% 71/94230402 0.0% 8/71 11.3% 3204000 NA +3074 chr4 + 190214555 11599795 11599794 11599860 66 TATATATATATACATATATATATACACACGTATATATATATGTATATATATATATATACACACACA chr4 - 94230402 7596414 7596413 7596479 86633924 86633923 86633989 66 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:.x..::.....x..:............:..:....:.x::.....:x..:::.::...:.x.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 4003381 NA +3183 chr4 + 190214555 11620125 11620124 11620195 71 CTGGGCTGCATGTGACCCATGGACTGTGGGTTGGACACGCTTGATCTAGACTGTCTACCTTAGAGATCCTA chr4 - 94230402 14521754 14521753 14521824 79708579 79708578 79708649 71 CTGGGTTGCACACAGCACATGGGCTGTGGATTGGACATCCCTGACCTAGCTTGTGTCACTTGGGTGTGCTA .....:....:::::.x.....:......:.......:x.:...:....x:...x.xx...:.:x:.x... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -2901629 -91328773 +3431 chr4 + 190214555 11622973 11622972 11623039 67 CTGCAACCTCCACCTCCTGGGTTCAAGAGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTATA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx.x..:...........x.x...x..x.x........::.:.........:.:..:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -6574153 -87656249 +3383 chr4 + 190214555 11644439 11644438 11644531 93 TTCTTTCTCTCTTTCTTTATCTTCCCCTTTCCCTCTTTTTTGTTCTTTCTTTGGAATCCACCTCCATTTCAGAGCACCAAATGCCTTTAAAAA chr4 - 94230402 28307740 28307739 28307829 65922574 65922573 65922663 90 TTCCTCTTTTTTTCCTCTTTCCATTCCTTTTCCTTTTTTTTGTCCTTTCTATAGAATTCTCAACTTTTTTAGAACATTCAA---CATTAAGAA ...:.::.:.:..:..:.x..:x::.....:...:........:......x.:....:.x.xx.:x...:...:..::x..---.x....:.. 81M3D9M 60/90 66.7% 90/94230402 0.0% 3/90 3.3% -16663301 -77567101 +3064 chr4 + 190214555 11702820 11702819 11702897 78 CTTTTTACCACATTCTTTCAATTGTGATTTTTTTATCCATATATATGTGCGTGTGTGTGCATATATATATATATATGC chr4 - 94230402 19559256 19559255 19559326 74671077 74671076 74671147 71 CCTTCTTCTGCATTTTT--AATT-----TTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATAC .:..:.x.::....:..--....-----.......x.:..x.x.x.x..:.........::...............:. 17M2D4M5D50M 55/71 77.5% 71/94230402 0.0% 7/71 9.9% -7856436 -86373966 +3376 chr4 + 190214555 11717478 11717477 11717551 74 TGTGTGTATATATATATATACATATACATATATATATGTATATGTATATATATATATACATATACATATATATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .....::...:x.:.........::...x......xx..:...:.:.:...:...x:...:.:.-....:.... 64M1D9M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% -25645562 -68584840 +3032 chr4 + 190214555 11717497 11717496 11717550 54 ACATATACATATATATATGTATATGTATATATATATATACATATACATATATAT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ....x.:..:.xx......::.:..:..x......:.....:.:.......... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -44933333 -49297069 +3068 chr4 + 190214555 11739788 11739787 11739831 44 TTTTTGTTTGTTTGTTTTTGTTTTGTTTTTATTTTGTTTTGTTT chr4 - 94230402 31219555 31219554 31219598 63010805 63010804 63010848 44 TTTTTGTTTGTTTGTTTTTGTTTGGGTTTTATTCCATTTTTTTT .......................x.x.......:::....x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -19479767 -74750635 +3142 chr4 + 190214555 11763565 11763564 11763622 58 CTTCCATTTCCTCCCCTTCCCTCTCCTCCCCTCCCTTTCCCTTCCATTCTTTCTTTAT chr4 - 94230402 45597726 45597725 45597781 48632622 48632621 48632677 56 CTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTC--TGCTTTCTGTAT ......:.....:..x........::....:.x:......:...--.x......x... 44M2D12M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% -33834161 -60396241 +3022 chr4 + 190214555 11799173 11799172 11799232 60 AAACTTAAAGTATAATAATAATAAAAAAATAAAATAAAAATTAAAAAAAAAAAGAAAAAT chr4 - 94230402 60583486 60583485 60583545 33646858 33646857 33646917 60 AAATATGAAAAACAGCAATACTAAAACAATCAAATACAAATAAAAAAAAAAAGAAAAAAT ...:x.:..:x.:.::....x.....x...x.....x....x..........::...... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -48784313 -45446089 +3000 chr4 + 190214555 11804048 11804047 11804108 61 GTCTATGTATATTCTCTCTATATGTATATATATATATATATATATATATATATATATATAT chr4 - 94230402 13065312 13065311 13065372 81165031 81165030 81165091 61 GTACGTATATACTCTCTCTTTATATACATATAAATTAGAATACATATATATTTGTATATAT ..x::.:....:.......x...:..:.....x..xx:x...:........x.:....... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -1261264 -92969138 +3061 chr4 + 190214555 11804051 11804050 11804110 60 TATGTATATTCTCTCTATATGTATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 13065313 13065312 13065372 81165031 81165030 81165090 60 TACGTATATACTCTCTCTTTATATACATATAAATTAGAATACATATATATTTGTATATAT ..:......x......x.x.:....:.....x..xx:x...:........x.:....... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -1261262 -92969140 +7932 chr4 + 190214555 11831839 11831838 11832293 455 AATTATATCAGAAAGGAACTTCGCACGTTTTCAAATAGCCTATTTTTAGGGAGCATGAATAATTACACCAGATGGCTGTTTAAAATCTGTTGGCATTGTTTCTACTGTACATTCATTGTTTAGAAATCCATTTTGTTAGA-TTTCAAGGAGAAGTACAAAGTTGCAATAGTCATCATAT-----TTAGCATTT-ATTTCTTTTGTAAATCTTTGTAAAAATTTCCACTGAGAGAAGGTTAACAGATATGCGGATATAGAGATTTTTAATAAATTATGATGGCAATGAAGCCAGAAAGCTGCCTCCATAAGAATACAGTATTTAATTTCCAGTG----GTTGCTAGGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCTCCACACTTGCATACACACACACACACCT--TTCTATGGTTGCCTTTATTTAACTTGTTATGATTTTTAAAGATTACTC chr4 - 94230402 13373301 13373300 13373716 80856687 80856686 80857102 416 AACTATATAGGGAAATACGATGCCACATTCACATGCAAACTATTTTTAGAGAACATGAATAATTACACCAGATGGTTGTTT-AATTCTCTTGGCATTATCTCTACTGTACATTTATGGCTTAAAGTAATATTTCCTTACACTTTTCAATATCTGTGGAAGGTCATGGTAAGTCCCATTTCTTTATTTGCATCTGATGCCTTTTATAGACATATTTCAATGCTACACCTGTCAGAGGGCT-ACAGAGATGCTGATCTGCAGACTTCTTAGTAGCTA-GTCAGCTCTTAGAACCAAAGTCTG--TTCATAAGAAAGCATTACATCTTTGACAGTATATTGTTGTTAGTGTTTTAT-----------------------------------------------ATACAAAGGAGCACTACTCATTCTATGATTGCCTCCATTTAATCTTCTGAGATTTACTAAAATTACCC ..:.....x:.:..:x.xxx.xx...:..:x..x::.:x..........:..:......................:.....-..x...x........:.:.............:..x.:...:.:xxx:....:x...x.-...:x.:x.xxx..:x..:..:::::..:x:x:...x.-----..x....:.-..x:.....:..:.:x.x.x.x..x::.x.xx...xx...:..:.-.....x....x...x.:x...:..:.x.xx.::..-.x::..xx.x.::x.x:..:x...--.:........x:..x..:x.xx..xx....:----....:...x.x...:.-----------------------------------------------.....x.x:x:...xx..--.......:......::......::.x:.:x.....x:x..:.....:. 81M1D58M1I38M5I9M1I45M1D35M1D24M2D31M4I16M47D18M2I48M 262/403 65.0% 416/94230402 0.0% 65/403 16.1% -1541462 -92688940 +3218 chr4 + 190214555 11832995 11832994 11833065 71 CTTGTGATAGATGATATTAGAGAGAGGACAGAATAATAAGATTAAAGAGCAAAGGAGAATAAAATCACACA chr4 - 94230402 50306435 50306434 50306504 43923899 43923898 43923968 70 CTTGTGAGAAAAGG-AGAAGAAAGAAGAAAGAATAATAATGATAAAGAACAAAGAAGAAAAAAACCCCACA .......x.:.x.:-.xx...:...:..x..........x:x......:.....:....x....:.x.... 14M1D56M 53/70 75.7% 70/94230402 0.0% 1/70 1.4% -38473440 -55756962 +3220 chr4 + 190214555 11866742 11866741 11866812 71 GCTCTTCTTTGTTTGTTTGTTTGTTTTTTTTTTGGTTGTTGTTTTTGTTTTTCCCTCAAGTGCATCCTAGA chr4 - 94230402 45158873 45158872 45158943 49071460 49071459 49071530 71 GCTTTTTTTTGTTTGTTTGTTTGTTTTGGCTAGGATTGGCCTCTTTGTTTTTCTCTAGACTATTTTCTAAA ...:..:....................xx:.xx.:...x:x.:..........:..x:.x.::x.:...:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -33292131 -60938271 +3686 chr4 + 190214555 11880595 11880594 11880675 81 AGAAACTATATATACATATATATGCACATATGTGTGTATATATGTATGTATA---TAAAAACATATGCATGAATATGTGTACAT chr4 - 94230402 61485370 61485369 61485453 32744950 32744949 32745033 84 AGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACAT ....xx..:...:.:.:.:.:.......:x.........:.......x....---.:x.:.::...:x..::...x........ 52M3I29M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% -49604775 -44625627 +3101 chr4 + 190214555 11891992 11891991 11892041 50 TATATATATATATATATATATATATATATACACACACACACAGTTATCAT chr4 - 94230402 10572843 10572842 10572892 83657511 83657510 83657560 50 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACATCAT ..x.........x.x.x............:........x....x:..... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 1319149 NA +3414 chr4 + 190214555 11925101 11925100 11925162 62 AAAAAAAAAAAAAAAAAAAAAACCCCAAGTTAAATGTCAACATGTCTAAGAAAGCTGTTTCT chr4 - 94230402 51035559 51035558 51035620 43194783 43194782 43194844 62 AAAAAAAAAGAAAAAAAAACCACCTCAAATGAAGTTTCAGCATGTCTAGCAAAAATTTTTCT .........:.........xx...:...:.x..:.x...:........:x...:x.x..... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -39110458 -55119944 +3298 chr4 + 190214555 11971991 11971990 11972102 112 GTCACCAGGCTGGAGTGCAGT-----GGCACG-ATCT---TGGC-TCAT----TGCAACCTCTGCCTCCAGGGTTCAAGCGATTCTCCTGCCTTAGCATCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197075 18197074 18197199 76033204 76033203 76033328 125 GTCACCATGCTGG-GAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .......x.....-.x....x-----.....:-....---....-....----.:..:..:xx:x..:.x.........:.x...x.xx.x..:...x.::.:.........:......x...... 13M1D7M5I6M1I4M3I4M1I4M4I73M 85/111 76.6% 125/94230402 0.0% 15/111 13.5% -6225084 -88005318 +3184 chr4 + 190214555 12013357 12013356 12013424 68 CATATATAAGCATATATATGTGTGTGTATATACATACACACACACACACACACACACACACATATATA chr4 - 94230402 8395803 8395802 8395870 85834533 85834532 85834600 68 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....x.:.x.:..x..:..:...:..:x..:.:xx.:.................x.....x..:x... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 3617554 NA +3038 chr4 + 190214555 12013358 12013357 12013417 60 ATATATAAGCATATATATGTGTGTGTATATACATACACACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.xx..:.:.::.:::....:.:....:.:.xx........::............. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -2951467 -91278935 +3251 chr4 + 190214555 12013358 12013357 12013415 58 ATATATAAGCATATATATGTGTGTGTATATACATACACACACACACACACACACACAC chr4 - 94230402 14964827 14964826 14964884 79265519 79265518 79265576 58 ATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.x.:x.::.::.:.:....:..........xx........::............. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -2951469 -91278933 +3182 chr4 + 190214555 12013359 12013358 12013434 76 TATATAAGCATATATATGTGTGTGTATATACATACACACACACACACACACACACACACATATATATATATATATA chr4 - 94230402 8395795 8395794 8395870 85834533 85834532 85834608 76 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:x.....x.:....:.x.::....::..:.x:...:xx.:...............:.x.:.:.x..:x... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 3617564 NA +3020 chr4 + 190214555 12013369 12013368 12013422 54 TATATATGTGTGTGTATATACATACACACACACACACACACACACACACATATA chr4 - 94230402 8395817 8395816 8395870 85834533 85834532 85834586 54 TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:......:..:x..:..xx...................x.....x.::x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 3617552 NA +3018 chr4 + 190214555 12013371 12013370 12013442 72 TATATGTGTGTGTATATACATACACACACACACACACACACACACACATATATATATATATATATATATATA chr4 - 94230402 12321707 12321706 12321778 81908625 81908624 81908696 72 TATTTGCGTATTTATGTACATACAAACACACACCCTCCCATATTATAATGTATGCATACATATATGCATCTA ...x..:..:.x...:........x........x.x.x..:.:xxxx..:...::...:......::..x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -308336 -93922066 +3276 chr4 + 190214555 12013377 12013376 12013448 72 TGTGTGTATATACATACACACACACACACACACACACACACATATATATATATATATATATATATATATGCA chr4 - 94230402 66904840 66904839 66904911 27325492 27325491 27325563 72 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ...x.x:.....::...::.........:...........:..x..x:.x:.x:.:....:.xx:...:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -54891463 -39338939 +3011 chr4 + 190214555 12013379 12013378 12013440 62 TGTGTATATACATACACACACACACACACACACACACACATATATATATATATATATATATA chr4 - 94230402 66904840 66904839 66904901 27325502 27325501 27325563 62 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA ...x.x:...:..::..::.........:..............x..x:.x:.x:.:....:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -54891461 -39338941 +3014 chr4 + 190214555 12013387 12013386 12013439 53 TACATACACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..:x.x..x...........x.........:x....::...:..::....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -75359354 -18871048 +3131 chr4 + 190214555 12013395 12013394 12013441 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -75359352 -18871050 +3923 chr4 + 190214555 12043747 12043746 12043820 74 CTGCAGCCTAGACTTCCTGGGATCAAGTGATCTGCCTGCCTCAGTCTCTTGAGTAGCTGGAACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:.:.x:.:.....x.......x.:::.xx.x.....:..:.::..............:.x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -6153379 -88077023 +3844 chr4 + 190214555 12065428 12065427 12065569 142 CCTTTAAAAGTATACATAGACTATGCATATATA----AATATACACC------TGTGTATATTTATACATGCACACTTGTGTATTTTTATATGTATATGTACAT----ACACACACACACACACACACACACATATATGTATATACTTAAAATACA chr4 - 94230402 8395737 8395736 8395886 85834517 85834516 85834666 150 CCTTTAGAATT-CAAGTGGAATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACA----TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA-AAAAACCCAAACTACA ......:..x.-:.x:.:..x.x..:.:...:.----..x..x.x..------.....:...x.:.:...:x...----.......x:........::x.....----.................x.....x..:x..:-.x.x..::...x.... 11M1D21M4I10M6I22M4D25M4I31M1D16M 101/136 74.3% 150/94230402 0.0% 20/136 14.7% 3669691 NA +3226 chr4 + 190214555 12065499 12065498 12065559 61 TATTTTTATATGTATATGTACATACACACACACACACACACACACACATATATGTATATAC chr4 - 94230402 66904840 66904839 66904900 27325503 27325502 27325563 61 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATAC .:....:....:.:..:.....:.....:...........:.:x:.x:.x:.x..:..... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -54839341 -39391061 +10507 chr4 + 190214555 12070414 12070413 12070746 333 TGGTCAATACCAATTAAAAATAAACACTCCACACAACTTAATCTCTTTTTCAATGGGTCA----GGCATTCATTTCACTGAGTTGTTAGTACCAGCAATTCAATTAAAGGAAGAAAAAGAAAGAACTATGCATTGCAATAAACTTTAGTATTTGAAATAGCTTAATAAAATGAACATAATCTCAAAAGTG----------TTTTTCTCCTTCAATGTGCAAGTTTTAATTACTCCATTTTGTATTAA-AAAACTTGTT-AAAAATGTCTAATTGCCACTTCCAACTGAATGACGTTCTATGATTGCTGGGTCTTGCCTGTCTGTAA-AGCACTTTAGGCTTGTATTTATA chr4 - 94230402 13414728 13414727 13415062 80815341 80815340 80815675 335 TGATTGCTATCACTTAAAA--------TATACATAACTCCTCTTATATCCCTACGGATCATTTAGATATTCAAATTATCAAGCTTTTAGTGCCAGAAATTCAATTAAAGGAGTAAAAT-------CTCTATGTTGTCATAAACTTTAGTATTTGAAATAGCTTAAGAAAATGAACTGCAACTCAGAAGtttttgctttccttttttttttttttttttcctcttttAATTATTTCATTCTGTCCTAACAGAACTTGTTAAAAAATGTCTAATTGATATTTACAACAGAGTAAGGTATCAGGACTTCTGGGCATTCTCTGCCTTTGATAACACATTCAGCTTGGTTTTATA ..:.::x..:..x......--------.x:...:....:xx::.x.x.::.x.:..:...----.::.....xx.:.:::..:.x.....:....x...............:x....x-------..x.:::...:x............................x.........xxx.x....:....x----------.....:.::..:xx.x.x.xxx.........:.:....:...x:...-.:........-...............x:.:..x....x..:.:.x..x::.x..:.x.....:x..x:...:..x.:.-.:...x..x:.....xx...... 19M8D33M4I54M7D65M10I47M1I10M1I67M1I23M 225/318 70.8% 335/94230402 0.0% 32/318 10.1% -1344314 -92886088 +3269 chr4 + 190214555 12079919 12079918 12079999 81 AATGCTTTAAATAAATATATATATATACACACACACACACACATGCACACACACACACACATATATACACATATATATTTC chr4 - 94230402 17520735 17520734 17520815 76709588 76709587 76709668 81 AATGCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCCC .....x..x.:.x..:.x.......x.....x.:.....:.....::x.::.x:::.:.x.:.:..:..:.......:::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -5440816 -88789586 +3176 chr4 + 190214555 12079942 12079941 12080016 75 TATACACACACACACACACATGCACACACACACACACATATATACACATATATATTTCGAGATAGAGTTTTGCTC chr4 - 94230402 87372741 87372740 87372812 6857591 6857590 6857662 72 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAG---GAATTATGCCC ...x:x..x...........x:........:x:.:..:...:...::......x.:.:...---..:..x...:. 61M3D11M 52/72 72.2% 72/94230402 0.0% 3/72 4.2% -75292799 -18937603 +12540 chr4 + 190214555 12098189 12098188 12098782 594 TTAAATACACCATTTCTTTGCAATAATTTCAACCGAGTTAAAGAACATCTAAACCGTATGTAACCTTTTATCATTTTTATGCTTATGACTGTGTGCTAATG-GAAAATGTAAATTTCCTGGCAATTTACAGCAGATTTTACATTAGTGGCACTGTTCTCATAGTCCTGTTATCTCAGTTTGTC-TTAAACAT-TTATTACTAATTTGACACCAGTGATATTCTAATTAAAGTTCTTTCTCTAACATGAAATAGAGTATTATATAAAGCAGAAAGAATGTTTTCATTCCATTTAGATTGCCAGATATTTCATGGGTGGTTTACAATAAATGTTGGAAGCAATTTTGTTTATTTGTTTAGGAAATCATCATTTCCATCATTCTTACTCCATATTACAACCCTGTATTTCCTTAGCTAATTTTCGTGTTTCATTAGAAGCTCTTTCATGCAAAGAGTTTTCGTTTAGGCACAATTGTTAATTAAAGTGAGTATTGAAATTGCTT-----AATTGCCTGAAAAAAGATGTTATATTTTTCCAAGCATGACCTA--------TGCTATTGGCAGAAAGATTATTAAAACTTT-CATATTTAAGGAAAAAAAAGCAG chr4 - 94230402 13417187 13417186 13417763 80812640 80812639 80813216 577 TTGAGCACACCATTCACATG--ACAGCCTGGAAAGAGCTTAGGCATATACAAAGCCTTTATATCCCTTTATCATTTTTGTGCCTCAGACTTTGTGCTAATGTAAAAATGTAAA-TCCGTAGCAATTAACAGATGTTTTTACATTA---GCAGAGCTCCCAAGCTTCTGCAATCTGCATTTGTCTTTAAACATGTTATTAGAAATTTGACACCAGTGATGTTCTAATTAAAGTCCATTTCCTAGCATGAAGT--ACTTCTATATACAGCACAGCAGA----TTTATTCTATCGAGACTGCCTCCAATTTCAT-GCTTGCTTACAGAAAGCGTTACAAATACTGTTATT--TTTGTTGAAAGGATCATCGCTGACATGGTGCTTAGGCTGCATTTCAGC------------TTGTTGATTGTTGATTTTTCTTAAGATCTGGTAATTCTCAGTGGACCTCATTTAGAAACTAGTGCTAACT-------GTGTCCAGATTTGTTTCTGAGTTTGCTTGAGAAGTTATGTTCAGATCCACCAGGCAGACACCAAAACCAACTGCTGGTGCTGCAAAGATCATTTGTCCTTCATAAAATGAAAAAAAAGAAAGCAG ..:.::........:x:x..--.:.:::.x:.xx...:.x.:.x.:..x:...x.x.x.:..x..:............:...:.xx....x..........-:..........-.:.x.:......x....xx.x..........---...xx.:..:..x:x.:...:x....xx:......-........-......xx.................:.............:.x..::...:......:.--.x.x:......x....x.:x::.----..:....:..:x...:....xxxx.......-.x.x.:.....:x..::...:x..::.x.x..:..--......x.::::......::.xx...x:.x....xx.:::...x..:.------------.x.:.:...x.:.xx...:x...::.x..xx.xxx.x:x.:x:.x::..:.....:x..x.x..:...:.-------..:.:x.:...xx..-----:x....:...:..:xx.....xx:x.::x...:...x:xx.:.--------....:x..x::x......:...x:xx...:-:.x.x.x..::....:....... 20M2D79M1I11M1D31M3D35M1I8M1I58M2D23M4D31M1D35M2D48M12D70M7D15M5I43M8I30M1I23M 368/560 65.7% 577/94230402 0.0% 51/560 9.1% -1318998 -92911404 +3485 chr4 + 190214555 12108329 12108328 12108449 121 TATCATATGTTATATC-ATATACATGAT--ATATATCATGTGTATCATGTTATATCATATATATGATATATATCATGTGTATCATATGTTATATCATATATATGATATATATCATGTGTATCAT chr4 - 94230402 48211458 48211457 48211579 46018824 46018823 46018945 122 TAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACC--ATATACGATCTATGAATCAT ..x.x.x.:.:.....-...:.:.:..:--......:x.:....:::.:.xx....x.x.....:x.....::...:.x........:.:.:.x......:x--.....::x:x.:..x..... 16M1I11M2I72M2D20M 80/119 67.2% 122/94230402 0.0% 5/119 4.2% -36103129 -58127273 +3607 chr4 + 190214555 12108405 12108404 12108525 121 TATCATATGTTATATC-ATATATATGAT--ATATATCATGTGTATCATGTTATATCATATATATGATATATATCATGTGTATCATATGTTATATCATATATATGATATATATCATGTGTATCAT chr4 - 94230402 48211458 48211457 48211579 46018824 46018823 46018945 122 TAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACC--ATATACGATCTATGAATCAT ..x.x.x.:.:.....-...:...:..:--......:x.:....:::.:.xx....x.x.....:x.....::...:.x........:.:.:.x......:x--.....::x:x.:..x..... 16M1I11M2I72M2D20M 81/119 68.1% 122/94230402 0.0% 5/119 4.2% -36103053 -58127349 +3587 chr4 + 190214555 12108481 12108480 12108610 130 TATCATATGTTATATC-ATATATATGAT--ATATATCATGTGTATCATGTTATATCATATATATGATATATATCATGTGTATCATGT---------TATATCATATATATGATATATATCATGTGTATCATATGTTATATCA chr4 - 94230402 48211458 48211457 48211598 46018805 46018804 46018945 141 TAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCAT-TGGATGATATGCAGTATCA ..x.x.x.:.:.....-...:...:..:--......:x.:....:::.:.xx....x.x.....:x.....::...:.x......:.---------....:......::xxx...:x.....-..x..x.....:x:..... 16M1I11M2I57M9I26M1D19M 90/129 69.8% 141/94230402 0.0% 13/129 10.1% -36102977 -58127425 +3629 chr4 + 190214555 12108525 12108524 12108667 143 TGTTATATC-ATATATATGAT--ATATATCATGTGTATCATGTTATATCATATATATGATATATATCATGTGTATCATATGT-------TATATCATATATATCATGTGTATCAT---ATGTTATATCATATATATGATATATATCATGTGTATCA chr4 - 94230402 48211465 48211464 48211620 46018783 46018782 46018938 156 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA .:.:.....-...:...:..:--......:x.:....:::.:.xx....x.x.....:x.....::...:.x........:.-------....:......::x:x.:..x.....---...x...::x:...xx.x...xx.:..x.x:...x.:. 9M1I11M2I59M7I26M3I38M 96/143 67.1% 156/94230402 0.0% 13/143 9.1% -36102940 -58127462 +3659 chr4 + 190214555 12108548 12108547 12108725 178 TATCATGTGTATCATGTTATATCATATATATGATATATATCATGTGTATCATATGTTATATCATATATATCATGTGTATCATATGTTATATCAT-----ATATATGATATAT--ATCATGTGTATCATATATCGTATATATGATATATATCATGTGTATCATATCATATCATATATATCATATAT chr4 - 94230402 48211465 48211464 48211642 46018761 46018760 46018938 178 TATCATATCTATA----CATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCAT-TGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAA--AAATCACTGATTTTCTATAT ......:.x...x----:...:x.:xx....:x.x...:.xx...:...:..x.x......xx.....::...:.x........:.:.:.x...-----.....:...x...--.....-..x..x....::x....xx.x...xx.:..x.x:...x.:.x.--.x....:xx..x.:x..... 13M4D77M5I13M2I5M1D43M2D20M 116/171 67.8% 178/94230402 0.0% 14/171 8.2% -36102917 -58127485 +3822 chr4 + 190214555 12108663 12108662 12108811 149 TATCATATATCGTATATATGAT--ATATATCATGTGTATCATATCATATCATATATATCATATATATCATGTGTATCATATATCA---TATATATGATATATATCATGTGTATCAT---ATATTATATCATATATATGATATATATCATGTGTATCA chr4 - 94230402 48211465 48211464 48211620 46018783 46018782 46018938 156 TATCATATCT-ATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ........x.-:..:...:..:--......:x.:....:::...xx....x.x.....xx.....::...:.x............---:.....:x.....::x:x.:..x.....---..:x...::x:...xx.x...xx.:..x.x:...x.:. 10M1D11M2I61M3I28M3I38M 100/148 67.6% 156/94230402 0.0% 9/148 6.1% -36102802 -58127600 +4195 chr4 + 190214555 12108898 12108897 12109049 152 TATCATGTATAT-CTTATATCATATATATCATATATAGCATATGATATATCATATATCATATATAGCATGTATATCATATATTATATCATATATCATATATAGCATATATAGCAT---ATGATATATCATATATATAATATACAGCATATATCATA chr4 - 94230402 48211465 48211464 48211620 46018783 46018782 46018938 156 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ......:.x...-.x..::x.xx......:x...:..x::...:x...x.:x.....xx.....:x...:.x..........:.:.x......:......::::x...:x.x...---.......::x:...xx.x:..xx...xx.x..:..x.. 12M1I102M3I38M 100/152 65.8% 156/94230402 0.0% 4/152 2.6% -36102567 -58127835 +3529 chr4 + 190214555 12108969 12108968 12109085 117 TATCATATATTATATCATATATCATATATAGCATATATAGCATATGATATATCATATATATAATATACAGCATATATCATATATTATATCATATATAGCATATATCATATATATCAT chr4 - 94230402 48211465 48211464 48211579 46018824 46018823 46018938 115 TATCATAT-CTATA-CATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCAT ........-:....-....::x.xx.....x:x...:..x::...:x...x.:x.......x....:.x::..x..........:.:.x......:x::...::x:x...:x..... 8M1D5M1D102M 77/115 67.0% 115/94230402 0.0% 2/115 1.7% -36102496 -58127906 +3807 chr4 + 190214555 12109543 12109542 12109679 137 TATCATATATA-GCATATGAT--ATATATTATATATCATATCACTTATATCATATATCTATATAACATATATATCATATATATCATGTCATATATCATATATCATATGTCATATATGATATATTATATGATATATATCAT chr4 - 94230402 48211465 48211464 48211596 46018807 46018806 46018938 132 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATAT--------TATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ........x..-:....:..:--.......x...:.xx.:.xxx....x.:x.....x.--------.....::.....x......:.xx:.:.x......:.....::x..x.....xx:...:x.......::.x:.. 11M1I9M2I36M8D73M 90/129 69.8% 132/94230402 0.0% 11/129 8.5% -36101922 -58128480 +3767 chr4 + 190214555 12122067 12122066 12122131 65 ACATAAACACACATATACACACACATGCACACACATGTGTATGTGTATATATGTATATACATATA chr4 - 94230402 49987085 49987084 49987149 44243254 44243253 44243318 65 ACACTAAATCATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatata ...:x..xx..:.........x...::........:....:.....:.:.x...:....:..... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -37865018 -56365384 +3223 chr4 + 190214555 12122072 12122071 12122122 51 AACACACATATACACACACATGCACACACATGTGTATGTGTATATATGTAT chr4 - 94230402 61485372 61485371 61485422 32744981 32744980 32745031 51 AATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT ..:.:.....:.:..............x::.........:.:...x.:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -49363300 -44867102 +3243 chr4 + 190214555 12149441 12149440 12149560 120 TAAAAATT-TAAAATACATCTATTTCACCACTTATTGACACGTAATTTTATATATATATATATA--------------TATATATATATATATATATATATATATGCATACATGCAACTAAATTAACATTGATGT chr4 - 94230402 28944698 28944697 28944832 65285571 65285570 65285705 135 TAAGAATTATAAAATATGTATATTATTCCAATGGTTGGAAAACTAGTTTCAAGATGAGTAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGACAT ...:....-.......::.x....x:x...x.x:...:x.x::x.x...xx.x..:x:..x.x.--------------....x.:.:.:.x.........x.....:...:...:..x...x.:........::. 8M1I55M14I57M 81/120 67.5% 135/94230402 0.0% 15/120 12.5% -16795257 -77435145 +3101 chr4 + 190214555 12152688 12152687 12152788 101 TGATTTTATGTATCTGGATCTTCTCTTTTTTTTTTTTTTTTTTTTTTGTCTGTTTAAAGGTTTGT-CAATTTTGTGTTACTTTCCAAAAAAACAGATTTTTG chr4 - 94230402 14228682 14228681 14228780 80001623 80001622 80001721 99 TGTTTTTTTCTATCTAAATTTTTTCTTTTCTTTTTTTTTCCCTCTCTGCCTTTTTAGAACTGTCTACAGTTTTA---AATTTTCCAAGTGCCTAAAATTTTG ..x....x.x.....::..:..:......:.........:::.:.:..:..x....:.:x.x.x.-..:....:---x.:.......:x:xx:.:.x..... 65M1I8M3D25M 66/98 67.3% 99/94230402 0.0% 4/98 4.1% -2075994 -92154408 +3120 chr4 + 190214555 12153092 12153091 12153174 83 AAATTCTCTCATATCCAAAATTCTCTTGTTATCAGTTTCTAGTTTTATTCTATTGTGGTCAGAGGAGATGGCTGATATTATTT chr4 - 94230402 75690802 75690801 75690884 18539519 18539518 18539601 83 AAATTCATTCATTTCCTCAGTTTTTATACTATGCATTTTTAATTATATTTTGTTGTATGCAGAAGTCATGGCAGATATTCTTT ......x:....x...xx.:..:.:x.::...xx:...:..:..x....:.:....:xx....:.xx.....x......x... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% -63537710 -30692692 +18157 chr4 + 190214555 12163708 12163707 12164227 520 ATGAAAATTACTTCTTTGAGTGGCTTTCTGCAAAGATCTTGGCCTGTCTGAATAATTACTGTTGAAATTAATGTCATCCTGCTAACCCCTAAAAGCACCTGACATTCTATCTTTGTGACTAATTATTTTACAGAAGGTGCTTTAATTGCAGGATGTAGGAGGTACTTTCTATAAATGCTTAACATTACAAGGGGACATGATCTGCAATTTTCAGATCATTAAACTTGCTACCAGGAATAAACATGCTTTGGGGACCAATGACGTTTGTCAAAAGAAGCTCATGTGTTCTGTGGAGGGCAGGAGGCCAGGCCCAGGAAAAGCAGCCTGATCATTGTCCTA---TGCTGAGTGCTTTTAATTATTTATTAGAAGGAAGATATGGGCAATGCAGGCCTTCTCCAGAGACATG--------------GCTATTCAAAGAAAAGGATATA-TAAAATCACTGAGTGAACTGAAATCGATGTCTAAAATAAATTCCCCAGGACAATTGCA--GGTATTTTGCAACTACCACAAAATAAAAGCTGAG chr4 - 94230402 13425015 13425014 13425535 80804868 80804867 80805388 521 ATTGAAATTATGTCTTCGAGCAGCTTTCTGATTAGATCCCCAGTTTGCTCAACAATTATTGCTGAAAT-GATGTGATCTAAGTAACTCTTTTTCCTGTCTGACATTATTTCCCTGTAACTAATTATCTTACAGACTCTGCTTTAATTGCAGGGTGTAGGAGGTACTTTCTATGGCTGCTAAGTATTAGAAGGGGACATGCTCTG-------CAGATCATTAAACGTGCTTCCAGGGATAAGCACACTTCTGAGACCAATGACATTTGTCAAAATTAGTCAGTGTGTT-TGTTGAGAGCAAGAGGCCAGTTCCAGGAGATGTCTCCTAATAATTG--CTAGCTTGGTGAGTGCTGTTAATTATTTAACAT------GATATGGAGGACATAGGCCTTCTCAAGAGAAATGCTTTCCTTGCTTCTTTTGTTTACA-AACAGGATGCATTAAAAACCCTTAGTG-ATTTAAATTTGTTTTTTAAACAAATCCAGACTGACAATTTTCTTGGTAGCCTGCAAACACTGCTAAAGAGGAGACAAG ..x:......:x....:...::........xxx.....::x:x:.xx..x..:.....:..:......-:....x...:x:x....:.:.xxxxx:::........x.x..::...:.........:.......xxx...............:...................::x....x.::....x...........x....-------.............x....x.....:....:..::...:x.:..........:..........xx..::x:......-...x...:...:........x:......:.x.:xx...:..x....--...---..x........x...........x:.x------.......:x:.:::..........x.....x...--------------x:.:..:.x.-..x.....::.-.....x.x..x....-.:.x....:x:.x.:.x...:....:.xxxxx.......x:x--....x::.....x:..::.x...x.::..x::.. 68M1D135M7D76M1D46M2D3M3I27M6D34M14I10M1D11M1I15M1D42M2I34M 361/501 72.1% 521/94230402 0.0% 39/501 7.8% -1261307 -92969095 +3414 chr4 + 190214555 12170280 12170279 12170369 90 CTGTAGTATATGATATAACATA-------CCTGTAATATAACGTAATACAAATTATATATATATATATACATACATATATACACACACACACACACA chr4 - 94230402 44197647 44197646 44197743 50032660 50032659 50032756 97 CTCCAATATATTATATAGTATATATAGTGCTTGGGATATAGTATAGTATTTATACTACAGATATGTACACATACTAACATACAGACACACGCACACA ..x:.:.....x.....::...-------.:..x:.....:::..:..:xx..xx..:.x....:..:......xx.:.....x......:...... 22M7I68M 63/90 70.0% 97/94230402 0.0% 7/90 7.8% -32027367 -62203035 +3320 chr4 + 190214555 12170326 12170325 12170376 51 TATATATATATATATACATACATATATACACACACACACACACACACACAA chr4 - 94230402 8395813 8395812 8395863 85834540 85834539 85834590 51 TATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA ...x..:....:...:.x.....xx...................x...... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 3774513 NA +3386 chr4 + 190214555 12181928 12181927 12181978 51 CTGTAAAAAAAAAAAAATATATATATATATATATATATATATATATACACA chr4 - 94230402 71167186 71167185 71167236 23063167 23063166 23063217 51 CTGTAAAAAAAAAAAAATACACACACACACATATATATATATATAATTACA ...................:.:.:.:.:.:...............xx:... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -58985258 -35245144 +3336 chr4 + 190214555 12181933 12181932 12182007 75 AAAAAAAAAAAATATATATATATATATATATATATATATATACACACACACACATTTATATA-TATGTGCATATAT chr4 - 94230402 64433202 64433201 64433277 29797126 29797125 29797201 76 AAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAAT .....:x......x.x.x.:.:.:.........x..:.:........:..:..:.x.:...:-:.......x.x.. 62M1I13M 55/75 73.3% 76/94230402 0.0% 1/75 1.3% -52251269 -41979133 +3880 chr4 + 190214555 12181962 12181961 12182096 135 ATATATATATATACACACACACACATTTATATATATGTGCATATATATATATATATATATATATCCTATTTGTTCTGTTTCCTTGCAGAACCCTAATATAATTCATTAATTAATTTGT---TCTCTTTTACCTGTACA chr4 - 94230402 17520749 17520748 17520884 76709519 76709518 76709654 136 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCCCA-CTGGTCTATTCCATCAGACAACAGTAGTTTTATTT-TTAATTACTCTGTTAATTGCCTTCATTTGTATA .:.x.......x.....x.:......x:..:.:x...:x::....x.:.:..::.........:..:.-:..x...:..:.x.::x.x...xx..:.x.x...:-.......x.:...---.:x.:..:.::....:. 68M1D35M1D13M3I17M 88/133 66.2% 136/94230402 0.0% 5/133 3.8% -5338787 -88891615 +3872 chr4 + 190214555 12183641 12183640 12183750 110 AAAGAAACAAAAAGAAAGAAAAGAAAGGAAAAGAAAAGAAAGAAAAAGGAAAGA--------AAGGAAGGAAAAGAAAGAAAAAGAAAAGAAAGAAGGA-----GGAAAGAAGGGAAGGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...x.::.............::...:.::..:.xx:x.......x....:--------..:..xx....x::.....x:..:...:.....:::.-----......:..:.:.:x.... 54M8I37M5I19M 76/110 69.1% 123/94230402 0.0% 13/110 11.8% -18349523 -75880879 +3345 chr4 + 190214555 12183646 12183645 12183770 125 AACAAAAAGAAAGAAAAGAAAGGAAAAGAAAAGAAAGAAAAAGGAAAGAAAGGA-AGGAAAAGAAAGAAAAAGAAAAGAAAGAAGGAGGAAA---GAAGGGAAGGAAAGAAGGGAA--GGAAG--GAAGGAAG chr4 - 94230402 53683455 53683454 53683587 40546816 40546815 40546948 133 AACAAAAAGAAAAACAAGAACTGGAGGGAATCAAAATCCAAAGGAAGGAGAAAACAGAAAGAGAAATCAATAAGAAGCAAGGAAGCAAGAGATTGGAAGGGTAACACTGGAGATAATTGGAAGTTGAAGCAAG ............:.x.....xx.:.::...xx:...xxx.......:..:.::.-..:..:.....xx..x.::..:x..:....x.:..:.---......x.:x.xx.:..:x..--.....--....x... 54M1I37M3I21M2I5M2I8M 86/125 68.8% 133/94230402 0.0% 8/125 6.4% -41499809 -52730593 +3017 chr4 + 190214555 12217359 12217358 12217429 71 ACATGTACACACACACACACACACACACACACACACACACACACACACACACACAGAATGAGAGAGAGAGA chr4 - 94230402 53842132 53842131 53842202 40388201 40388200 40388271 71 ACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACAAAACTAAAGAGAGAAA ...xx......:x:::.::....:.::..:...:::.x.:.x.....:.......:..:x.:.......:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -41624773 -52605629 +3014 chr4 + 190214555 12230804 12230803 12230857 54 CTCTGTTTCATCCTAAAATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 57961831 57961830 57961884 36268519 36268518 36268572 54 CTCCTCTTCATCTTGAAATATTTTGCTTTTTTTTTTTTTTTTTTTCTCATTTCT ...:x:......:.:....:x...x:...................:.:x...:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -45731027 -48499375 +3240 chr4 + 190214555 12235037 12235036 12235138 102 CTTTCAGGTATTACATTTAAGTTTTTAATCCATTTTGATTTGATTTTTATATATGGTGAGATATAAGGGTCTAGTTTTCTTTTTTTGCATATGGATATCAAG chr4 - 94230402 54122631 54122630 54122731 40107672 40107671 40107772 101 CTTTCTAGTTCTGC-TTTGTGTTTTTTCTCCTCTGTGATCTGGTTGCTGTATATGGAGGAATATGAAGACTTAGTTATTTTACTCTGCCTTTAAATATTGGG .....x:..x:.:.-...:x......xx...x:.x....:..:..x:.:.......x.::....:.:.:::.....x.:..x:.:...x.x.::....:::. 14M1D87M 64/101 63.4% 101/94230402 0.0% 1/101 1.0% -41887594 -52342808 +3091 chr4 + 190214555 12237440 12237439 12237496 57 TATATACCTCCCAACTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAC chr4 - 94230402 51342054 51342053 51342108 42888295 42888294 42888349 55 TATGTACTTT--AAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ...:...:.:--..x.....x.........................xx..x..x... 10M2D45M 46/55 83.6% 55/94230402 0.0% 2/55 3.6% -39104614 -55125788 +3823 chr4 + 190214555 12237982 12237981 12238091 110 TGTCTCCACAAATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATATATATACACACACAGAGACACACA chr4 - 94230402 35554933 35554932 35555041 58675362 58675361 58675470 109 TGTCTTTACAATTTTAAGTATAGGC-TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA .....::....x.x..x:....x::-..x......x..x.........::::.:..x..:.........::...:.x.:..:.:..x.x..x..x::x..:.x...x... 25M1D84M 73/109 67.0% 109/94230402 0.0% 1/109 0.9% -23316951 -70913451 +3118 chr4 + 190214555 12237992 12237991 12238048 57 AATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 19704273 19704272 19704329 74526074 74526073 74526130 57 AATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...x..x...:.......::.......x.....:...x::.........:.:.:x.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -7466281 -86764121 +3164 chr4 + 190214555 12237994 12237993 12238067 74 TATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATA chr4 - 94230402 19704277 19704276 19704350 74526053 74526052 74526126 74 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ..x...:.......::.......x.....:...x::...........:.:x..x.xx:.:.x.x.x...x..:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -7466283 -86764119 +4145 chr4 + 190214555 12237995 12237994 12238097 103 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATATATATACACACACAGAGACACACATACACA chr4 - 94230402 73121107 73121106 73121209 21109194 21109193 21109296 103 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..::....x:...:.:.....:.::x:x.::..x..:::.::..:..x:..:.::x:.....:.:.:..:.....x....:.x...............::.:. 103M 65/103 63.1% 103/94230402 0.0% 0/103 0.0% -60883112 -33347290 +3030 chr4 + 190214555 12237998 12237997 12238048 51 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x.:......:.::.......:....x.x................ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -35851499 -58378903 +3203 chr4 + 190214555 12237999 12237998 12238047 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x..................:.x:....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 7831576 NA +3094 chr4 + 190214555 12238000 12237999 12238081 82 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATAT---------------------ATATATATAAATATATATATATACACACACA chr4 - 94230402 48089497 48089496 48089599 46140804 46140803 46140906 103 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATA .:..x:.x.:......:.:........:....x.x......:.........---------------------..x...xxx....:..x.:x..:......:. 51M21I31M 61/82 74.4% 103/94230402 0.0% 21/82 25.6% -35851497 -58378905 +3092 chr4 + 190214555 12238003 12238002 12238051 49 ATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx.:.:x....................x:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 7831580 NA +3004 chr4 + 190214555 12238006 12238005 12238066 61 TATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:.:..:x....::..x....x.....::...:.......:.......:.x...x..x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -20721562 -73508840 +3022 chr4 + 190214555 12238010 12238009 12238093 84 TATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATATATATACACACACAGAGACACACATA chr4 - 94230402 35554958 35554957 35555041 58675362 58675361 58675445 84 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x......x..x.........::::.:..x:.:.........::...:...x..:.:..x.x.:x..x::xx.:.:...x.:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -23316948 -70913454 +3005 chr4 + 190214555 12238017 12238016 12238057 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -77583264 -16647138 +3036 chr4 + 190214555 12238020 12238019 12238059 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -77583262 -16647140 +3054 chr4 + 190214555 12238022 12238021 12238067 46 TGTGTGTGTGTGTGTGTGTATATATATATATATATATAAATATATA chr4 - 94230402 40286119 40286118 40286164 53944239 53944238 53944284 46 TGTGTGTGTGTGTGTGTGCATATAAATTTAGAAACATAAGTATATA ..................:.....x..x..x.x.:....:...... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -28048097 -66182305 +3196 chr4 + 190214555 12238044 12238043 12238095 52 TATATATATATATATAAATATATATATATACACACACAGAGACACA-CATACA chr4 - 94230402 10572843 10572842 10572895 83657508 83657507 83657560 53 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACATCATACA ..x.........x.x..............:..........x.x...-...... 46M1I6M 46/52 88.5% 53/94230402 0.0% 1/52 1.9% 1665201 NA +3334 chr4 + 190214555 12244790 12244789 12244886 97 ATAGCGCGAGACTCTGTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTACAGAGGGCAAAACTGACAGAAGGAAGACCAGTTAAAACATTACT chr4 - 94230402 24662100 24662099 24662196 69568207 69568206 69568303 97 ATAATGCAGTATTTTCTATGGAGACCAGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACT ...::..::x.:.:.x.x..:.:.xx.:xx......................:x..x.:.x....xx......:.::....x.:xx.::.x..x... 97M 63/97 64.9% 97/94230402 0.0% 0/97 0.0% -12417310 -81813092 +3265 chr4 + 190214555 12250780 12250779 12250845 66 ACACACACACACACACACACACACAAACAGAGAGAGAGAGAAGAAAAGAAAAGAAAAGAAAGGAGA chr4 - 94230402 85245753 85245752 85245818 8984585 8984584 8984650 66 ACACAAAACCACACACACGCACACACACAGAGAATAATAAAATAAATGAAAACAAATGGCAGGAGA .....x.xx.........:......x.......:x:.x.:..x...x.....x...x.:x...... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -72994973 -21235429 +3032 chr4 + 190214555 12254072 12254071 12254128 57 ACTACCTGTGCCTCAAAAGACAGATGAAAGGAAAAAAAAATGATGCTTAGATCTAGT chr4 - 94230402 54783834 54783833 54783890 39446513 39446512 39446569 57 ATTACTTGTGTCTCCAAAGACAAATAAAAGAAAAATAAACTAGCGCTTAGAAACAGT .:...:....:...x.......:..:....:....x...x.:::.......xx:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -42529762 -51700640 +7677 chr4 + 190214555 12305381 12305380 12305706 326 GACCTATATTTGAATCTTTTAAAGTACAACCACAAATAGGATATCATTTGTCTTTCTTAAAATCCTCCTGGGGACAGAAAACACACACACACACCACACACACACACACACACACGCATATACACACACTTCACTTGTCAATACTGTTTACTATTTGGTGGAATAAATGTAAAGTTGATGTTTACCCCAGCAGTTGCTGATGGCTTTTCATGGACAATGACATGTCCTTGGACTCTCTGACGTTTCATTTTGTGCTGCTGGGGCTGCCAGCTCTTTT-CTGTAACTGCCTGTCAAAATAACAAAATCTTGCCTACTTATTTAGAACA chr4 - 94230402 13451438 13451437 13451712 80778691 80778690 80778965 275 GACCTGCATTTGAACTTCT-----------CAGAAACAG--CAGCATTTGTCTTCCTCTAAAACCTCTCAGAGATGAAACACA--------------------------------------AGAAACATTTCACTTGTCAAGACTGTTTACTACCTGTTGAAGTAAATGTAAATTTGATGTTTCTCTAAGAAGGAGCTGATGGCTTTACTCTG-TGCTAACGTATCCGTAGATGTCTTGGCATTTGATTTTGCTATTTTGATACTAGAAGCAATTTTCCTATGATTTAGTGTCAAAGCTATAAGGTCATCTTGACCTGTTTAGAACA .....::.......::.:.-----------..x...:..--:.x..........:..:x...x....:::.:..:::..x...--------------------------------------.x.x...:............x...........::..x..:.:..........x.........x:.:x..x..xx............x.x:x.-::x.:..:.:...x.:..:x:::..:.:...x......:xx.x:..:x:..:xx...xx....-..:.:.:.xxx.......::x.:..::..x.x::x..:.:......... 19M11D9M2D42M38D92M1D63M1I49M 184/274 67.2% 275/94230402 0.0% 53/274 19.3% -1146057 -93084345 +3286 chr4 + 190214555 12319479 12319478 12319554 76 TATCTTCATGTGGCAAAAAAAAAAAAAAAGAAAAGAAAAGCACCTAGCTATTTCT-----CTGGCTTCTTATAAGTGCACA chr4 - 94230402 88872862 88872861 88872942 5357461 5357460 5357541 81 TGTTTTCTCTTGGGAAAAAAAAAAAAAAAGAAAGTAAAAACACCTTGCTAATTTCCCTTACTGGGTTTTGATTATTACACA .:.:...x:x...x...................:x....:.....x....x..::-----....x..:.x..x.x.:.... 55M5I21M 57/76 75.0% 81/94230402 0.0% 5/76 6.6% -76553383 -17677019 +9533 chr4 + 190214555 12323160 12323159 12323505 346 TCATTTTTATTTGCTGATATTCAGTGCTTTTCATCATCAAACTATACCTGCTCCTAATACAGGCCCCCAACCATTCAGCCATTGAGAAGGTAGTGATTTTCACCGG---TGTGATTTCCTCCCAATGACATTTCTTTCAAATAAGAAAATCTGTGTGAAGTGGCTTTGTGACTATGAGTAAA-TTGTTTGAAGTTTAAAATGTCAAATATTGGCAATAACCATGTTAATTTTGTAAGTTTGGAAAGTAAAGCAAAATAAATGTTGACTTTTCATT--TCCCAGGGAGGA--------CCTAATACTATTCTAGTAATCCCCAATCCTCTGGCTACCCTTTCTTAAATTATACCTATGCCA chr4 - 94230402 13455130 13455129 13455476 80774927 80774926 80775273 347 TCACTTCTACT-GATGACAGGCAGTGTTACCCATGTCAAAACTTGTTCTACTTCGAAATTCAGCTCCC-----TTTTGTTATTG-GATAGTGGTAATTTTTACTAAGCTTGTCTCTTTCTCATGGTGACATTTTGTTTAAATAAGAAAATCTGTGTAAAGTGGCTTTGTGCCTATGGGTGAATTTATTTGAAGTGTAAAATGTCAA--ACTGGCAACAGTAA---TAATCCTGTAAATTAGGTATGTCAAATAATGTACATGTAGACATTTGATTCATCTAAGAGTGGAAGGATTTCTCTAACTCTATTTTGAGAAACCTGAGTCAT-GAGCTCCCATTTCTTAATTGGTACTTTTGACA ...:..:..:.-.x...:.xx.....:.x::...xx:x.....xxx:..:..:.x..xx:x:..:...-----..:x.::....-..x:..:..:.....:..:::---...xx:..:...x:::........:x..:..................:.............x.....:..:..-..:........x...........--.:......:.::x.---....::.....:..x..x.x..x..::..x:..x....x...x...x...--..:x..:.x...--------:....:x.....:.::x..x..:x.:..x.-x:...x..x........x.x:...:.x..x.. 11M1D56M5D11M1D21M3I73M1I23M2D14M3D50M2I12M8I30M1D32M 230/333 69.1% 347/94230402 0.0% 27/333 8.1% -1131970 -93098432 +26726 chr4 + 190214555 12328092 12328091 12328759 668 CCAATTAGAATTCCTCAGCCTACATTGCGCAG-GTTA----CCGTACTGAGCATCATATTGTTTGTGGAGAAATCTCTCACCTTTATGATCTCCTTCATTTCTGCCTAATCGTCTAAGACAAGAATAGCACGCTGTGCCT-AAGGGGGAAATTTTCCATTACTACTGGAAAGATAAATGGTAGGAAGCAAAATGAACCAGGCTCATTACAACCTT-------------------ACCAAAAAAAAAAGCAAATTGGTCTCCAAAAATGATAGAATAGGGCTGACATTTTTAACACTTTTTCTTTGAATTGTGGCATTTTATATCAAG-GTTTTCATAATGTACAATATAAACACTTACAGACATTTGGAATAATGCATGATGCTTAATATGTTTT----------CCCTGGAATTGTACCACCCTTCAGAAAATGTCAACTATTTTTTTAACCGATGCTGACAAAACGTGAACAGAAAGATTATATTTAAGGAAGTATAATGATCATTTAGTTTGCAGTAGCTGTGTTTTTAATCGGTATAATAATGGCTGTAATGTCACTTGATAAGCTGTGAAAATGCCCCAATTTCTAAGAATGGTTAAAGGCAGACAGCTCATTTGATGCTTTAAATATCTGATGAGCCAGTAGATGACAGAACTGAAGGGAAGATTGATTTTTCAGAACCAAATACAGTCTACAATAAT chr4 - 94230402 13458038 13458037 13458710 80771693 80771692 80772365 673 CCACTCAGAATTTGTCAG---ATATTCCTCAGTGTTAAATGCTATAAAGTACATCACATTGTTTGCGAAAAAA-ATCTCACCTTTATGATCCTTTTCATTTCTGCCTAATTGTCTAAGATAAGAATAGCTTGCTGTGCCTTGAGGGGGAAATTTTCCATTACTGCTGAAAAGATAAATGGTAGAAAGCAAAATGAACCTGGCTCATTACAACCTTCTGaaaaaaaaaaaaaaaaaagaaaaaaaaaGGCAAATTGGTCTTCAGAAATGATATAATAGAGCTGACACTTTTAATAGTCTAGAGTTCAAATGTGGCATTTCATATAAAGTTTTTTCATAAAGTATAATACAAACAATTACAGATGCTGGCAGTAATGAATGGTACTTAGTTTCTTTTACTAGCTTTACTCTGAAAGT---------TGCAGGGGGAGGAAAATGCTTTT---ACTGATACCTACTTAA-ATGAG-AGAAAGGTTACTTTTAAAGAAACATAACATTCATTTCAGT----GTGTTTCTAGTCTTAATCTCTATAATAAATGTACTAATGTCTTTTGATCTACTGTGAAAGTGCACAAATTGCTTAG-------AAAGCCAGACAGCTCATTTGATGCTTTAAATATCTGGCGAGCT-TTGAAGGACAAGGCTGAA-AAACAACTGATTTCTCAGTAAAAAACATGATTCATAATAAT ...x.:......:x....---.:...x.x...-....----.::..xx.x:.....:........:.:.:...-x................:::................:........:.........x:.........-:.....................:...:...............:..............x................-------------------.xx.........:............:..:........x.....:.......:......:.x.:.xxxx..x..x..........:....x...-x.........x...:....:.....x.......:::.x.x.:.....x...:.:....:.x.x....----------.:...:..x.---------.x...::::x.xx..x.::....---..:...:.:x..xx..-:...:-......:...:x.....:...::....::x......x:x.----..:x:.x.:x.:......xx........xx.:xx.......x:.....xx:........:...x.x....x..x..-------....x...............................::....:-x.::.x....:::.....-::.x:.:......:....x.xx...:.:::.::.:...... 18M3D11M1I4M4I32M1D66M1I74M19I93M1I67M10I10M9D23M3D16M1D5M1D40M4D76M7D43M1D18M1D41M 486/637 76.3% 673/94230402 0.0% 67/637 10.5% -1129946 -93100456 +3399 chr4 + 190214555 12347016 12347015 12347083 68 ATGTACCCTAAAACTTAAAGTATAATTAAAAAAAAAAAAACCCTAAAAAAAAAAAAAAAAAAAAGAAC chr4 - 94230402 49177699 49177698 49177766 45052637 45052636 45052704 68 ATATATTCTGAAACTGCTCATATGATTAAAAAAAAAAAACATCTGGGAAAAAAGAAAGAAAAAAAAAC ..:..::..:.....xxxx:...:...............xx:..:::......:...:......:... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -36830683 -57399719 +3023 chr4 + 190214555 12353028 12353027 12353094 67 CCAGCCTAGGTAACAAGAGCAAAATCCCAACTCAAAAAAAAAAACAAAAACAAAAAACA-AAAACAAA chr4 - 94230402 41576908 41576907 41576969 52653434 52653433 52653495 62 CCTGCTTAGG------GCACAAAGTACCAAATTAAAAAAAAAAACAACAACAAAAAGCAGAAAACAAA ..x..:....------.x:....:.x....x.:..............x........:..-........ 10M6D43M1I8M 51/61 83.6% 62/94230402 0.0% 7/61 11.5% -29223880 -65006522 +3178 chr4 + 190214555 12416410 12416409 12416475 66 AAAAAGAAAAGAAGGAAGAAAGAAAAAAAAAGGAAAGGATGATGAGAACCATTTATAGAAAGCAGG chr4 - 94230402 42895012 42895011 42895074 51335329 51335328 51335391 63 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGT---GAGAAACCAGG ...:..:..........:...:..:......x:..::..x:........::.---x.....x.... 52M3D11M 48/63 76.2% 63/94230402 0.0% 3/63 4.8% -30478602 -63751800 +23281 chr4 + 190214555 12416821 12416820 12417400 580 TACAGTTATACAAATACTTTAGTA-----AATGTCTTTCGGG--ATCATGTAATTCCTTTAGGGAATATGTGAGGAAACCCCCTG---TCTACTTGATTTACAAAATGCAGATGGTTAGTAATTCTTGAATTGTT-ATTGATGCCTCCTAACATCTTTCTCAGCACCCTTAAAGAGAGTGATATAATTCTTCAAGACATAATATTACACTTAGGAATTGCTCTAAAAGATCATTAATCTTTTGTGCATGACTCTAAGCACTCAGCTAGTGTTAAATAAACCATGACAAGAAATGAAATTCAAAATACTC----TGATTTCTGCAAAATGCTCTCCATTTGCCAATTATGTCCTACCATATTTCATTTTATCAGTTATTCATTATTCTTGGCTAAAAACACAGTTATGACAAATAGTGTATCTCAGAGGAAGTTTCATGATTTTCCAAAAAAATATGATCAATATGTTTCAGCCAAGCCATTGCTTATATTTTTCACTTGGTGAAAGTAATATTGTGAAT---------GATGATGATGGTGATTTTATTTGTAGCTGTTGATAAATTTGGCTTTTAGGAATATAAATAT-------AACTAAAAGGAATAT chr4 - 94230402 13473256 13473255 13473839 80756564 80756563 80757147 584 TACATTTACTGACACACTTTAGTACAGTAAATGCCTTTTGGGCTGTCTCATAACATTTCAAAATAGTTTTCAAGGGAAACCCTTACCCTCTTCTTGATTTATGCAATACAGATGGTTGGTAAAACTTGAATTTTTTATTGATGCATAGTAATATCTTTCTCAGCACCCTTAAAGAAAGTGACATAATTCTTTAAGACATAATATTACACTTAGGAATTGCTCTAGAGGATCATCAATCTTTTGTGAAATTCTTCCAACACTCTGCTAGTGTTAAATAAACCATGACTAGAAATGAAATTCAAAATAGTTTGAGTGATTTCTGCAAAACGTTCTCCATTTGCCAATTATGTAACACTATATTTCATCTTATCAGTTATTAATTATTCTTTGCTAAAAATACAGCAATGGCA---------------AGGGATTTTTGTGAGTTCTGGAAGAATTACAGATGACACACTTCATGAAAACCA-----GATACCATT---TTATTAAAAATGACAAAGTTAATGAACCAAGGGATTATGATGCTGTATTTGTTTATCAGTGTTGCTTTCTTGG----TTAAAAAAAAAAACATTCAATCCCACTGAGAAGAATGT ....x...:xx.x.:.........-----....:....:...--:..x::...:x::.:x.::x.:.x.x::...:..x...:.:---...x.........::x...:.........:....xx........x..-........x.xx...:.......................:.....:.........:................................:.:......:...........x.xxx..::x.:.....x.......................x...................x.:----..............:.:....................xx:..:.........:............x.........x........:....:x...:..---------------...:.x...::...x..::x:..:..x..:::x::.:.:::....xxx..:...-----x...::x..---..:x.:...:.:.:.xx..x...---------...x......x..xx...:...:.x:x.....x.xxx..x.----...::..x.x...:..-------x...:.:.:....:. 24M5I13M2I41M3I47M1I173M4I97M15D54M5D9M3D23M9I41M4D16M7I15M 417/553 75.4% 584/94230402 0.0% 58/553 10.5% -1056435 -93173967 +3242 chr4 + 190214555 12420877 12420876 12420957 81 CAAACCTGCCTCCCATTCTATTCCTAAATAAGATAGCTACAGAGAGAGAGAGAGAGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 66871427 66871426 66871507 27358896 27358895 27358976 81 CAAACCAGTGTGCAATTGTATTCCCAAATTAGAGAGAGACAGAAGGAGGGTGAGAGAAGGATGCATGGACTGACAGAAAAA ......x.:x.x.x...x......:....x...x..xx.....::...:.x..........x.x.x...xx..x:...::. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% -54450550 -39779852 +3095 chr4 + 190214555 12429529 12429528 12429571 43 TTTGCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAT chr4 - 94230402 82617156 82617155 82617198 11613205 11613204 11613247 43 TTTGCTGACTTTCTCTCTCTCTTTTTTTTTTTTTTTTTAACAT .......::...:.:.:.:.:...................... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -70187627 -24042775 +3120 chr4 + 190214555 12429942 12429941 12430006 65 TCTGACTCCCTCTTTTGTCTTTCTTTCTCTCTCTGCTTCTCTCTTTCTCTCTCTCTCTCTCTTTG chr4 - 94230402 35176005 35176004 35176069 59054334 59054333 59054398 65 TTTGTCTGTTTGTTTTTCCCTTCATTCTCTATCTGCTTTTCTCCTTTCCTTTCTCTATTTCTCTG .:..x..x::.x....x:.:...x......x.......:....:..::..:.....x.:...:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -22746063 -71484339 +3402 chr4 + 190214555 12429946 12429945 12430057 112 ACTCCCTCTTTTGTCTTTCTTT------CTCTCTCTGCTTCTCTCTTTCTCTCTCTCTCTCTCTTTGACTC--------CCTGTCTTTCTGTCTCTTTCTCTCTCTC--TCTGCTTCTTTCTCTCTCT chr4 - 94230402 43081897 43081896 43082024 51148379 51148378 51148506 128 ACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x.:.:...::x..x.x...:------..x..:..x...:..::...:.:......x.:...:x..x::.--------:...xx:......:..............--....:xx...::...:... 22M6I43M8I28M2I19M 77/112 68.8% 128/94230402 0.0% 16/112 14.3% -30651951 -63578451 +4228 chr4 + 190214555 12430008 12430007 12430133 126 CTCCCTGTCTTTCTGTCTC-------TTTCTCTCTCTCTCTGCTTCTTTCTCTCTCTCTCTCTTTCTCTCTTTGACTCCGTCATTCTGTCTCTTTCTCTCTCTCTTTCTCTCTTTGACTCCCTGTCTTTCTGT chr4 - 94230402 43081900 43081899 43082026 51148377 51148376 51148503 127 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTC----TCTCTCTGTAGCTTCT--TCTTTCTGT ......x:...:x..::..-------.x..:...::.:..:x:..:........x.:...:x.x.::.x:..:..:..:.xxx......:............----.......x.::..:.:--......... 19M7I76M4D16M2D9M 84/120 70.0% 127/94230402 0.0% 13/120 10.8% -30651892 -63578510 +3000 chr4 + 190214555 12485046 12485045 12485082 37 TGTATGTTTTTTTTGTTTGTTTGTTTTTTTGTTTTTC chr4 - 94230402 66372541 66372540 66372577 27857826 27857825 27857862 37 TGTATGTTTTTTTTCTTTGTTTGTTTGTTTGTTTTTC ..............x...........x.......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -53887495 -40342907 +3404 chr4 + 190214555 12505403 12505402 12505479 77 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTGCTGCCTTAGCCTCCCAAGTAGCTGGAATTACAGGTGCCCAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.::..........x...xxxx.x..:.....::.............:....x....x.x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -5691723 -88538679 +3034 chr4 + 190214555 12553952 12553951 12554028 77 AGTCTTTCCTGTTCAGACTTTTTAAGTCCTTTGGCTCAATGCCTCCTTTTACTGCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 2110781 2110780 2110857 92119546 92119545 92119622 77 AATTTTCCCTCCCTGGCCCGTCCATGGCTTTCTCCTCAATGCCTTTCTTTATTTCTTTTTTTTTTTTTTTTCACTTT .:.:..:...x::::.x.:x.::.x.x.:..:xx..........:::....:.x.................:x:... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 10443171 NA +3448 chr4 + 190214555 12554087 12554086 12554160 74 CTGTAACCTGCGCCTCCCGGGTTCAAGTGATTCTCCTGTGTCAGCCTCCCGAGTAGCTGGGACTCCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::.:..::x:x..:.:...........x...x.xx.xx.......::.:.........:...x..x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -5643039 -88587363 +27573 chr4 + 190214555 12578856 12578855 12579597 742 CTGACAAGAGACAGGCAAAAATAAATCTTTTTTTATCATAGTTACTGTAATAATACATTTTCTGAAAACTATTTT---TTAACCCAAGAACCACCGAAAAATGATAATCATTGAGCCCTTCTTACACAT-----TTGAAGAAGCTCATATATCATAA-GTCTAACGTTTGGTCTTTTCTTCCA-TTGTCTTCCTTGGGAAAAAGAGAA----AGTTGAATGAATCTGAGCAGTTGCTTACAATTGTGCTACTTCAAATTGCCAAATCTTAGTCTTTGACATTTTATCATTGTCATGCATTGGAGAAAAATGCTCCTTAATAGGGTAGTATTTAAAATAAGAAGCCACGACCTTGTCATTATTATTAGTACAATGGAACCAGGCACGCTAGAATCAGCCATCCAAGCTATGGAGGGGCTGGAAGTTAATTACATTACCTTAGACAATAAGTTGGTCTTCGTGGTTCCAGTTATCTCTGCACACAGTTGGCTCAATTTTTTGTTGTTGTGTAATGTCCCATTAATCACAGTTACATTTGTTCCCTGCCGTGTGATTCATCATCCTTTCCCCCTGAAACGACTTCCATTCTCCAGGACTCAAGATAAACCACTAATTTAAAGTGGCAGTGACCAACCTTGGCTATCACAATGGCATAGTTTGAC--TGAGGAGAGTCAATGGCAGCGCACACAGACTCCAGGCATTTCAGTCAATTCAAATTATCCCTTGTGATTGGGTTCAGGCACGGGGATAGAGATCA chr4 - 94230402 13509883 13509882 13510622 80719781 80719780 80720520 740 CTAATAAG-GATAAAGAATAAAAAAGCACTTTTAATCACACCTTCTATAACAAAACTCTTTTTGGAAACTGCTTTGACTTCATACAGTGAC-----AAAAATTATAATCGATGGGTAAGTCTTGAATTTAAATATTCAGAAACCCCATAAATCATGGTGTACCATGTTTAAGCCTTTCTTCCAATTGTCTTCTC------ACAGAGAATGTTAGTTCAATGAGTCACAACAGTATATTGTAATTGTACTATTACAAATTGCCATATCTTCATCTTTGACATTCTATCAGTCCTCTGCAATGGGTAAAAATGAAGCTTAATAGCCCAGTATTTAAACTAGGGATCCACAACCTTGTCATTATTTTGGGTACAATAGTA--AGCCTCACTGGAACCAGCCAACCAAACCATGGGGAATCTTGGAGTTAATTACATCACCTTAGACAATAATTTGCTCTTTGTAGTGGTAGCTATCTCTTTCCACAGTTGGTTCTCTTTTTTGTTGAGTTGTGATGTCCCATTAATCACAGTTACATTTGCTCTGTGTCATGTTATTCATCATCCTTTATCCCTGCAGCTGTTTCCATCCTTTTGGACTC-AGATAAACTGCTAATTTAAGCTGGTGATGTCCAACCTTGAATATCACAATGGC-TTGTACCACAATGCTGAAGGTCAGTTACTGCATTCACACAGTCCAAGATTTTTAGTCACTAC-AATTACTCCACAT-CTCCTGCTCATTTGCTTGGATAGAGATCA ..:.:...-..:.::x..x..x...x.x:....x....:.x:.x..:...:..x..x:...:..:.....::...---..x.:x..:x:..-----......x......:x..:.:xxx....:x.:x.-----..x.::..x.:....x.....::-..x:x.:....::x.:.........-........::------.x......----....x.....:..xx.:....xxx..::......:...:.x..........x.....x:...........:.....x.x::x....x...:x.......xxx........xx:..........x..:.:.x....:..............x.x:.......:.x.--..x.x.:..:...:......x....:.:....:.::x..x.:............:..............x...x....:..:..xx:..:.......x:x.........:..xx..........xxx...:...........................:..:x..:.:...x..............x:.....x.:.x::......:..::x......-........::.........:x...:::..x.........:x............-.x..x:x..--..xx..::....:.x:.x..::x....x.x....:.xx...:.....x.x.-.....::..x::.-x.:xx.:...xx::.xx............ 8M1D66M3I13M5D33M5I23M1I25M1I10M6D8M4I165M2D218M1D53M1D9M2I51M1D13M1D29M 522/724 72.1% 740/94230402 0.0% 34/724 4.7% -931027 -93299375 +3118 chr4 + 190214555 12604549 12604548 12604595 47 ATTCATTGCTGTTATTGTCTTTATTATTATTGTTTTTTTTTTTTTTT chr4 - 94230402 51218556 51218555 51218602 43011801 43011800 43011847 47 ATTCTTTGCTGTTATTGTTTAGATTTTCATTGTCTTTTTTTTTTTTT ....x.............:.xx...x.:.....:............. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -38614007 -55616395 +3115 chr4 + 190214555 12609902 12609901 12609959 58 TTATTTATCTGCATGTTTATAAGCTCTGGCATAAAAAAAAAAGGAAAAAAGGAAAGGA chr4 - 94230402 75131803 75131802 75131860 19098543 19098542 19098600 58 TCATTTTTTTCATTGTTTATAAGCCCTGAAAGGAAAAAAAAAAGAAAAAAAGAAAAGA .:....x.:.xxx...........:...:x.x:.........:.......:....:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -62521901 -31708501 +3478 chr4 + 190214555 12610241 12610240 12610323 83 AAGACCTCCCTAATAAAATCCAGGTGATTTATAGCATGTACACAGAGGAAACAAATTTGGGGTAAAAATTGACAGTTATGCAA chr4 - 94230402 13524435 13524434 13524517 80705886 80705885 80705968 83 AGAATTTTTCTAATAAAACACAGATGATTTATAATATGTCCACATGGGAGACATATTTGGCATATAAAGCAGTTGCAGTGCAA .::.::.::.........:x...:.........::....x....x:...:...x......x:..x...x::::x.:x:..... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -914194 -93316208 +3343 chr4 + 190214555 12614223 12614222 12614321 99 TCTCTCTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTC----------CTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTC chr4 - 94230402 52305234 52305233 52305342 41925061 41925060 41925169 109 TTTCTCTCTTGCTCTCATGCTTTCCCTCCGCCTTACTCTGTTATTCCTTCACTTTCACGTGATGTACCTGATTGTCTCCCTGTGTTTTTTTTTGTTTTTTTTTTCCTCC .:........x..:..x.x......:..:x:...x..:.x..x...:...x.....----------.::xx..x.:..::.x.x...:...:.x...:.:...:...:. 56M10I43M 67/99 67.7% 109/94230402 0.0% 10/99 10.1% -39691011 -54539391 +3208 chr4 + 190214555 12614225 12614224 12614318 94 TCTCTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCC chr4 - 94230402 35294590 35294589 35294683 58935720 58935719 58935813 94 TTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC .::......:.::...x.x..x:.....::.:::..x....:.:x..:..:.......::x:...:::.:xx.:x..x.:.::.....x..... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% -22680365 -71550037 +3102 chr4 + 190214555 12614232 12614231 12614321 90 TTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTC chr4 - 94230402 8439372 8439371 8439461 85790942 85790941 85791031 90 TTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTTC ....xxx.....::..x.x..::x....::....x:.:::...::::..:.:......:...:..:......:xx.:.xx::...:.... 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 4174860 NA +3663 chr4 + 190214555 12614248 12614247 12614403 156 TTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTCTCTTCTTTCTTTCTTTTTCTTTCTCTTTCTCTTTCCCTTCCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCT chr4 - 94230402 91731746 91731745 91731898 2498505 2498504 2498657 153 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCC---CATTGTTCCCTTCTCCATCTCTT ..::.:x.........x:..:x:.:..:....:.::.:......::....xxxxx......:.x:..::...:....x...:xx.x...x..x..::.:x...:::x:x...x..x:.x.:x::x..::.---.x..x..:......::x.:..:. 130M3D23M 89/153 58.2% 153/94230402 0.0% 3/153 2.0% -79117498 -15112904 +3258 chr4 + 190214555 12614321 12614320 12614434 114 CCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT----TTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCCT chr4 - 94230402 23468156 23468155 23468273 70762130 70762129 70762247 118 CCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ......:....:.....:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x.....----.::..x.:x......x:.:....x:..:...::x..x:..:..::... 66M4I48M 71/114 62.3% 118/94230402 0.0% 4/114 3.5% -10853835 -83376567 +3172 chr4 + 190214555 12614323 12614322 12614433 111 TTTTCTTTTCTTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCCTTCCTTCCTTTCCTTTCTTTCC chr4 - 94230402 81583171 81583170 81583286 12647117 12647116 12647232 116 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTTTCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTTCC ..:......:....:..:.::..-----:..x.:::x..:.::.x..:..x:.....:::..xx......:..x.:xx.:..:...::::::..::....x.x...x..x.:.... 23M5I88M 67/111 60.4% 116/94230402 0.0% 5/111 4.5% -68968848 -25261554 +3003 chr4 + 190214555 12614324 12614323 12614404 81 TTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTT chr4 - 94230402 15963355 15963354 15963435 78266968 78266967 78267048 81 TTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ...:.x.x...x...xx::..xx.x......:.......:.....:::::...xx..:...:...:xx.....x...:... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -3349031 -90881371 +3636 chr4 + 190214555 12648763 12648762 12648853 91 TGTGTATATATAATATACATATATGTGTGTATATAATATATACATATGTGTGCATACATAATATATATATGTGTGTATATACACATACACA chr4 - 94230402 91530243 91530242 91530333 2700070 2700069 2700160 91 TGTGTATATATGATGTTCATACACATGTGCATATCATGTATGTGCATGAAAACATATCTCACATTTAAATATGCACACGTGCACATGTATA ...........:..:.x....:.::....:....x..:...::::...x:x:....:x.x.:..x..x..:..:::.::.:.....::.:. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% -78881480 -15348922 +3124 chr4 + 190214555 12648768 12648767 12648847 80 ATATATAATATACATATATGTGTGTATATAATATATACATATGTGTGCATACATAATATATATATGTGTGTATATACACA chr4 - 94230402 26024784 26024783 26024863 68205540 68205539 68205619 80 ATATATTGAAAAGAAAAATGTCTTAAGATTATCTATACACATGTATGCTCTCCCATTATATATATGTGTGTATATATGCA ......x:x.x.x.x.x....x.xx.x..x..x......:....:...x:x.x:.x....................::.. 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% -13376016 -80854386 +3158 chr4 + 190214555 12648791 12648790 12648866 76 GTATATAATATATACATATGTGTGCATACATAATATATATATGTGTGTATATACACATACACACATATGTGCCCAT chr4 - 94230402 10913766 10913765 10913841 83316562 83316561 83316637 76 GTAGACGATACACATATCTGTCCAGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCAT ...x.::...:.:.:..x...x::x..x.x.x..:...:.......::...x...:.........:..::x.:... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 1735025 NA +4894 chr4 + 190214555 12652819 12652818 12652983 165 TGGTGTCTTGCAAAAGATTTTGATATGCACAGAGGTTTCACCAAAGAATGTGAAGC-AAATCCACCTAGAGAACTCAGAGCTTGCCCTGAGGCCTTAAAAGAACTTTCTTCTCTTTTCAATACTCCTGGCTTTCCCTGCAACCA----------CTGTCAGAATTTTGAAAAGCCA chr4 - 94230402 13538431 13538430 13538595 80691808 80691807 80691972 165 TGGTGTCTTTCGGA-GATTTTAGTATGCACTGAGCTTTAGAGGATAAATATGAAGCCAAATCCAACCTCAGTGCTTTGGGTTTGCCCTGAGGCCTAGAAAGAACTTTGTTCTTTATGTA----------CTCTGCCTACACTCAGAGATAGATGCCTATAGAATATTGAGAAGCTA .........x.::.-......::.......x...x...x:xx:.x:...:......-.......x.:xx..x:..:x.:.:..............x:..........x....:.x.x:.----------..:.x...:..x:..----------.:xx:.....x....:....:. 14M1D41M1I62M10D15M10I22M 110/154 71.4% 165/94230402 0.0% 22/154 14.3% -885612 -93344790 +3187 chr4 + 190214555 12660468 12660467 12660534 67 AAGGAGAGAAAGAGAGGGATAAAGAAAAATAGAAAAAAAGGAAGAAAGAAAAGAGAAAGGAAGGGAA chr4 - 94230402 48273073 48273072 48273139 45957264 45957263 45957330 67 AAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA ..........x..::...:.........::..x:.x.:..x.::..:..::.::....:...:::.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -35612605 -58617797 +3038 chr4 + 190214555 12663932 12663931 12663983 52 TCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGT chr4 - 94230402 72884654 72884653 72884705 21345698 21345697 21345749 52 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGAAT ....x..::....:...............:.........:.x.x.xx...:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -60220722 -34009680 +3923 chr4 + 190214555 12665990 12665989 12666170 181 TATTATATATAATATATTTTATATATAAAATATATTATATATAAAATATTTTATATAATATATATTAAATATAATATATATAATATATAAAATATATATATTATATATAATATAATATATAAAATATATATAT-----TATATATAATATATTATATAAAATATAAAT-ATATAATATATTATATAA chr4 - 94230402 67910059 67910058 67910227 26320176 26320175 26320344 169 TATTACATATACAATACTAAAAATATAC----TATTAGATACATAATAA----------ATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTT----TATTAATGACACACTACATTACAGAA .....:.....xx...:.xx.x.....x----.....x...:.x....x----------.......:x.....:............:..:x.....:..:.x.x...x.x.xx.::xx..x......xx.:..-----..:......x.x.x...x.----...x...-.:.:.x..:....:.x.. 28M4D17M10D74M5I19M4D7M1I18M 117/163 71.8% 169/94230402 0.0% 24/163 14.7% -55244069 -38986333 +3793 chr4 + 190214555 12666022 12666021 12666200 179 TATTATATATAAAATATTTTATATAATATA-TATTAAATA--TAATATATATAATATATAAAATATATATATTATATATAATATAATATATAAAATATATATATTATATATAATATATTATATAAAATATAAATATATAATATATTATATAAAATATATATATTATATATAATATATTATAT chr4 - 94230402 67910059 67910058 67910220 26320183 26320182 26320344 162 TATTACATATACAATACTAAA---AATATACTATTAGATACATAATAAATATATTGTATATAGTAT--------------ATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGA-ATA-CATATAAGA-AAATATTTTATTAATGACACACTACAT .....:.....x....:.xx.---......-.....:...--.....x.....x.:....x.:...--------------.........:..:x.....:..:.x.x...x.x.xx.x:xx..x......x..:..x.:.-...-:......:.-.x....x....xx..:.:.:.:..:.. 21M3D6M1I9M2I24M14D60M1D3M1D9M1D27M 117/159 73.6% 162/94230402 0.0% 23/159 14.5% -55244037 -38986365 +3755 chr4 + 190214555 12666025 12666024 12666262 238 TATATATAAAATATTTTATATAATATATATTAAATATAATATATATAATATATAAAATATATATATTATA-TATAATATAATATATAAAATATATATATTATATATAATATATTATATAAAATATAAATATATAATATATTATATAAAATATATATATTATATATAATATATTATATAAAATATATATAATATATAATATATTATATAAAATATATATATTATATATAATATATTATAT chr4 - 94230402 20596435 20596434 20596623 73633780 73633779 73633968 189 TAGAGAAAAAATATTTC-TAAGTCAAATGTTAATTACCATGTATATCATA------------ACATTATAACGTGaaataatatttaa-----------------taatttgtattataaaaCAGA-----------TACTTTATAGAACATATATAAT-------ATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGT--TGTCTTATAT ..x.x.x.........:-..x:x:.x..:....x..:x..:.....x...------------.:......-::.:.x.......x...-----------------....x.:.xx.......:.x.-----------..:.x....:..:.......x.-------.......:.....x..:..x..:x.......x:..:x..x.....xx.xx.....xx..:.--.:.x...... 17M1D32M12D8M1I17M17D21M11D22M7D61M2D10M 136/188 72.3% 189/94230402 0.0% 51/188 27.1% -7930410 -86299992 +3684 chr4 + 190214555 12666209 12666208 12666365 157 TATAATATATAATATATTATATAAAATATATATATTATATATAATATATTATATAAAATATATATATTATATAAAATATATAATATATAATATATATATTTTATATATAATGTAATATATATTATATATAAAATATTTTATATATATTATATATTAT chr4 - 94230402 67910059 67910058 67910199 26320204 26320203 26320344 141 TATTACATATACAATACTA---AAAATATAC-TATTAGATACA----------TAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATA-AATTTAAGCTG-ATTAAATATCAACATTTGAATACATATAAGAAAATAT ...x.:.....xx...:..---........:-.....x...:.----------...x.x......xx......:x...........:..:......:..x.x.x...-...x...xx.:-....x....x..xxx..xx...:....x.x.x.x... 19M3D9M1D11M10D54M1D11M1D37M 105/141 74.5% 141/94230402 0.0% 16/141 11.3% -55243850 -38986552 +3470 chr4 + 190214555 12666441 12666440 12666539 99 ATGTATTATATATATTTTATATTATATATTATATATTATATATTTTATATAATATGTAT-----TATACATTATATATTATATATT-----TTATATAATATGTATTAT chr4 - 94230402 48211488 48211487 48211596 46018807 46018806 46018915 109 ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ..:....x...:..:.x........x.x.............:::x...x..x:..:...-----:...:.::.....:x..x...x-----..:x..:.....:.x... 59M5I22M5I18M 71/99 71.7% 109/94230402 0.0% 10/99 10.1% -35545047 -58685355 +4317 chr4 + 190214555 12666499 12666498 12666671 173 TTATACATTATATATTATATATTTTATA------TAATATGTATTATATATTTTATATATATATATTATATATTTTATATATATATTATATATTTTATATAATATATATTATATATTTTATATATTTTATATATTATATATTTTATATATTTTATATATTATATATATTTTATATATTT chr4 - 94230402 20596456 20596455 20596627 73633776 73633775 73633947 172 TCAAATGTTAATTACCATGTATATCATAACATTATAACGTGaaata-atatttaata-atttgtattataaa----aCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGT-TGTCTTATATCTCT .:.x.::...xx..::..:...x.:...------...::..x.x..-......x...-..x.:.......x.----.:.x...:x.....x.x:x...............:....x.x.:..x..x.......xx:..:.x....x.x:...x....x.x..:.-.:.:......x.:. 28M6I12M1D10M1D14M4D88M1D14M 117/166 70.5% 172/94230402 0.0% 13/166 7.8% -7929957 -86300445 +3654 chr4 + 190214555 12666596 12666595 12666820 225 ATATATTATATATTTT-ATATATTTTATATATTATATATTTTATATATTTTATATATTAT--ATATATTTTATATATTTTATATTATATATTATATATTTTATATTATA--TATTATATAT-----TATATATTTTATATTATATATT-----TTATATAATATGTA-TATTACATATTATATATTTTATATAATATGTATATTACATATTATACATTTTATATAATATGTATATTACATA chr4 - 94230402 48211429 48211428 48211654 46018749 46018748 46018974 226 ATTTACTATTCATTTTGATAGGTTTGGACTAACCTTTATCATATCTAT---ACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTA--------ACATAAAATGTCT-TAAAAAATCACTGATTTTCT---ATATTCCTACTACATA ..x..:...x:.....-...x:...x:xx..x:x.x...:x...x...---.:...:x.:--.......:...:..:.x........x.x.........x...:::...--...:......-----:.....::x....:x..x...x-----..:x..:.....:.-...:.x:x....--------.:....x....x.-.x.x.x..:.:xx.....x.---....x:x..:...... 16M1I31M3D9M2I47M2I10M5I22M5I14M1I12M8D13M1D20M3D16M 147/210 70.0% 226/94230402 0.0% 31/210 14.8% -35544833 -58685569 +3426 chr4 + 190214555 12666905 12666904 12667059 155 TAATATATATTTTATATAATATATATTTTATATAATATATATTTTATATATAATATATATTTTATATAATATATATTATATA----TAATATATATTTTATAT-----AATATATATATTT-----TATATAAT-ATATATGTTATATATAATATA-TATATTATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACAGAACA ..x..:....x:x...:x.x.x....x:...xx:...:...x.xx......x:......x.x..........:..x......----.:.x...x....x.xx.-----.....xx.:....-----:......x-.x....x....xx..:.:.:.-..:....:.x..:. 82M4I17M5I13M5I8M1I21M1I14M 109/155 70.3% 171/94230402 0.0% 16/155 10.3% -55243154 -38987248 +3542 chr4 + 190214555 12666935 12666934 12667095 161 TATAATATATATTTTATATATAATATATATTT---TATATAATA--TATATTATATATAATATATATTTTATATAATATATATATTTTATATAATATATATGTTATATATAATATATATATTATATAATATAT------ATATTTTATATATTACATA-TATTTTATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAA-ATTTAAGCTG-ATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACAGAACA ...x.:.....:xx..:xx.x......:xx..---..:......--......:......:.......xx...:..:......:..x.x.x....-..x..x.:.:-..xx.....xx.:...xx.xx.:....------.........xx..x...:.-..:x...:.x..:. 32M3I9M2I48M1D10M1D27M6I19M1I14M 113/159 71.1% 171/94230402 0.0% 14/159 8.8% -55243124 -38987278 +3622 chr4 + 190214555 12666969 12666968 12667114 146 TATAATATATATTATATATAATATATATTTT-----ATATAATATATATATTTTATATAATATATATGTTATATATAATATATATATTATATAATATATATATT--TTATATATTACATATATTTTATATAATATATATTAT-ATATATTTTAT chr4 - 94230402 67910059 67910058 67910204 26320199 26320198 26320344 146 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAA-ATTTAAGCTGATTAAATATCA---ACATTT----GAATACATATAAGAAAATATTTTAT ...x.:.....:x...:xx..x.....:.x.-----.:......x.......x......:.......:x...:..xx.....:..:.x.x....-..x..x::.--...x....:.---.:....----x....:....x.x-.x......... 31M5I58M1D9M2I10M3D6M4D13M1I11M 103/138 74.6% 146/94230402 0.0% 16/138 11.6% -55243090 -38987312 +3463 chr4 + 190214555 12667028 12667027 12667118 91 TATGTTATATATAATAT---ATATATTATATAATATATATATTTTATATATTACATATATTTTATATAATATATATTATATATATTTTATATAA chr4 - 94230402 67910059 67910058 67910152 26320251 26320250 26320344 94 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAA ...xx:.....:....:---.x....xx...x.x...:...x.xx.......::.....x.x..........:..x......:..x.x.x.... 17M3I74M 67/91 73.6% 94/94230402 0.0% 3/91 3.3% -55243031 -38987371 +3718 chr4 + 190214555 12714032 12714031 12714232 201 TTTACATAATATATATGATATTATATATA---TTATATAATATATATGATATATA------------TATTATATAATATATATGATAT-----ATATATTATATAATATATATGATATATATATTATATAATATATATGATATATAATAAATATATTCATATTATATATAATATAATAAATATATATCA-----TATATATTTATAGAAATTATATATTATATTA chr4 - 94230402 67909987 67909986 67910206 26320197 26320196 26320416 220 TTTACATTTTAGGAATAAAATCACACTTAATTTTTCATACTAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGAT---TAAATATCAACATTTGAATACATATAAGA---AAATATTTTATTA .......xx..x:x..:.x..:.:.:x..---..x:...x..x.x.x...x.:..------------:.:.x...x.:.....::...:-----.....:...xx:...:...xx.x......xx......:.......:....:..:..x...:..x::x:x..x..x...xx.:..---..x......-----.:x...:x....::.---.x.....x..... 29M3I23M12I22M5I84M3D9M5I15M3D13M 132/195 67.7% 220/94230402 0.0% 31/195 15.9% -55195955 -39034447 +19027 chr4 + 190214555 12745885 12745884 12746613 729 TGTGAAATACGGTATATTTTCCAAAGTCAAGTGCTTACGGTTCTCTATTGCCTTAAGAAGCAGGAGGCCGGCAAGGAAGGGGCCTTGGGGGACGCAGGGAGGGGAGATCTATGACACATTGT---TCTGAGAAGGTGGAAGAAGGATGACGGAGGTGTGTGGTCCTGCAAAGTATAGGCC--AGGCGATGCCTCCCTCCCCCAGAAACTCATTTATCACCTTGATGGTTTCAGCTCATTTACAGCCAAGTTATTGTCACCCTTAAAATAATGTGGCTTGACAGGGAAAAAATGAAATCCTTGTGAAAAGTTACATAGTCATCACACTCTGGAGTCAAAATATAGACTGCAGTATCCAAACACCGGG----------------GCCTGGGTACGGCGGGGGTGGTATTTCCTCTCTCCTGCAGGCTTTGGTTTTAGAACAGGACATTAACATTTATGTCATGTTAACGTGCACCTAGGCATGGCGTGTGGCCTCCTGCCATGGACACAGAGAAACACATGCCCCAGCACTGCCTCAGCACGACCGCCAAGACT---------TTCAGTATAAATG-GAGACGCGTGTTTCCTTGCCCAGAGAGTTAATAGCGGGCGACGACATAAATGTTTGGTCATCCCCCAGTGCACAGACTCCATTTCACATGTCAGGGAAGTACTAAATCTTGCCCCGCTACAAGCAGCAACTGATTTTTG-ACATCAGAACCAATTAAGCCAAAGCCTTCTCAGCTTGGAACCCCCA chr4 - 94230402 13561802 13561801 13562494 80667909 80667908 80668601 693 TGCAACATGCACTGTATTTTCAAAAGTCAAGTGCTTGGGTCTCTTCGCTGCCATGTGCATTAGAA------CAAGTA------------------------------TTTGTAATGTGTTGTAAAGCTAACAAGCTTGGTTAAG-----CAGAGGTGTGTGGTCTTTCAAAGTGTATTCCCAGGGTATAACCTCCCTCCTCAAGAAACTCATTTATCACTGTGATGGTTTCACCTCATTTGAAGCCAAGTTATTGTCACCCTTAAAATAATGTACCTTGACAGG--AAAAATGAAATTCATTTGAAAAGTT--ATAGTCATCACGCTCTGGAGTCAAAATATAGACTATCATGTCAAAACATTAAGCAGATGAAAACTTTTTCTATGTATATGTTGTAGGTGGTATTT--GTACCACAGCTTATTTTTTTTTTTTAACTGGATGTAAGTATTTG-GTCGTGTGCATATGGAATAATACACGGCCTGTGGTTGGCTGTCTTTG-CAGGGAGGTGTACATGCTTCATAGCAGCCCTGGTATGGCAGCCAAGGCTTTTAAAACGTTCAGCCAGAATGAGAAACGC----------GCACATGTATTTAATAGGCAGTAACTGTTTAAATGATTGGTCACCCCCCAGTGCAC-GGCTATATTTCAGGTGTTGTGAGTGTGCTAAATCTTCCCCTGTCCTCTTTTGCAACTGATGTTTGCACTCCGGAGTCTCTT-----AAATCTTTCT---CTTTGACCCTCCA ..::.x..:.:x.:.......x..............:x.x:...::::....x.:x.x.x:..:.------....x.------------------------------.:.:.:.::::....---x..:.x...x.x.:xx...-----.:.............:.x......:..xx..--:..::xx:.........:.x.................:x...........x.......:x...............................:x.........--...........:.x.x.........--...........:......................::x:.:..x.....::::.----------------x:x..x:..:.x:.x:..........--x:x.:x.x..xx::...xx....xx...x...::.x.::....:-...:...xx.::..x.x:x.x:..:...x.....::xx...:.x.x.-..x:...:x::......::..xx:.x...:::.:.:.:.x......:..---------.....:xx:....-..:....----------..x..x:x.x.......xx:.::..x::x......x.......:............-.:..x:......x:...::x.::x..:.........x...:.::x:xxx:x.........x....-..x:.:..::.xx..-----...x.:....---...x..x..:... 65M6D6M30D15M3I19M5D31M2I102M2D25M2D53M16I26M2D44M1D47M1D49M9I13M1I7M10D56M1D65M1I15M5D10M3D13M 459/661 69.4% 693/94230402 0.0% 100/661 15.1% -815917 -93414485 +3256 chr4 + 190214555 12757484 12757483 12757586 103 TGTGTGTGTGTGTGTGTGTGTATTTATTTATATAAGCATCTATATAACCCTGTGGGTATACATATATGCACACACACATACACAGATATATATACACATATAA chr4 - 94230402 8395789 8395788 8395875 85834528 85834527 85834614 87 TGTGTGTATGTGTGCATAAACATGTATTTACATA----------------TGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA .......:......::.:x::..x......:...----------------...:x.:x.....xx..:..........:.......:.:.x..:x.:.x.x.. 34M16D53M 62/87 71.3% 87/94230402 0.0% 16/87 18.4% 4361695 NA +3194 chr4 + 190214555 12768163 12768162 12768215 53 GGAAGGAAAGGACGGAGGGAGGAAGAAAGAGAAGAAGGAAGGGAAAGAGGGAG chr4 - 94230402 9237707 9237706 9237759 84992644 84992643 84992696 53 GGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAG ..:..::..:.:.:.x...........:..:..:......:::...:...... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 3530456 NA +3569 chr4 + 190214555 12768906 12768905 12769006 101 TTTCTCTGTTTCACTAACAGCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCTTCTCTTCCTTCC chr4 - 94230402 61964748 61964747 61964833 32265570 32265569 32265655 86 TTTCTCTGTTTCAA-ATCAGCTGCTGACCTGT--------------TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCC .............x-.x.....x..xx...x.--------------.:....x:.x.::..:::::...:::..................:.......... 14M1D17M14D55M 65/86 75.6% 86/94230402 0.0% 15/86 17.4% -49195842 -45034560 +21105 chr4 + 190214555 12770481 12770480 12770802 322 TTGGGGGAGAGCACATTCAGAACC-AGAGTGCAGCTGCAAGGCTGT--TTCCCTTGACTTGTGTGGCACAGAGCTGAGAGAGTGTAAAGGACGGGAAGTGATGTGGAACCGGAATTCAGAATGATCCAGGTCCCACTGCAGTAAAAGTCTGCCTGAGAAGCAGCTGAGTACATAAAAGCTCATAAAGAAAACCAAAACAATGATATTCCCCATTGTGACTGTTTAGTCTTTCTGTAGAGACTCATGGGGTCCTGGCTATTATCTATTTTTAATATCACTTGACCTGAAAATTTATGCTACCATCTGGTAGAAGAGGAATATTTTT chr4 - 94230402 13566814 13566813 13567137 80663266 80663265 80663589 324 TCGGTGGAGAGCACATTAGGAGCTGATGGCGCAGCTGTGTGGATATATTTCCCTTGACTTGTGTGGCATGGGGCTTAGAAAGTATAAAGGGTAGGAAGTGAGGTGGAACTGGAATTCAGAATGATCAGGGTCTCTCTGCACTGAGAGCACAGTGAAGAAACAGCTGAGTACATAAAACCTCATAAAGAAAACCAAAACAATGATATTCCCTATTGTGACTGTTTAGTCTTTCTGTAGAGACTCATGAGGTCTGGGCTATTATCTATTTTTAATATCACTTGACCTGAAAATTTATGCTACCATCTGG-AGAATGTGAAGATTTCT .:..x............x:..:.:-.x:.:.......::x..x.:.--....................::.:...x...:...:......:::........x.......:................x:....:.x.....x.:.:..:x::x:x:....:.................x................................:...................................:....:x......................................................-....x:x...x....:. 24M1I21M2I259M1D17M 270/321 84.1% 324/94230402 0.0% 4/321 1.2% -796333 -93434069 +3005 chr4 + 190214555 12771129 12771128 12771192 64 CCAGCTACTTTTTCTTTTTTTCTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGTATTTTTA chr4 - 94230402 27426832 27426831 27426895 66803508 66803507 66803571 64 CCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCTGCAATATTTTTA ..x:....:::.:......:.::.......:........:.:.x:...x.:.x:x:........ 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -14655703 -79574699 +3433 chr4 + 190214555 12771407 12771406 12771478 72 CTGCAACCTCTGCCTCCTGCGTTCAAGCGATTCTTGTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...x.......:.x...x::x.x........::::................x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -5425719 -88804683 +3023 chr4 + 190214555 12783520 12783519 12783589 70 TTCTGGTCCCACCTCTTTCCCAAACGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTTAG chr4 - 94230402 31939931 31939930 31940000 62290403 62290402 62290472 70 TTCCTGTGCCCTCCCATTTCCTGATGTGGTTTTTTTTGTTGTTTTTTTTTTGTTTGTTTTTTAGAATTAG ...:x..x..x:.:.x..:..x:.:..xx........x..x..........x...x......x..x.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -19156411 -75073991 +3062 chr4 + 190214555 12788080 12788079 12788165 86 TATCTAAAGG---TCATTTTTAGCTTTTCAGTTGTTTAGTCCTACAGAAACTGAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAA chr4 - 94230402 9779979 9779978 9780067 84450336 84450335 84450424 89 TATCTCAAGAAACTGGTTCTCAGCTTTTTGTTAAATTATTATTTTGGATTCAGAAAAGAAAGAAAAAAAAATAAGAGAGAGAGAGAAAA .....x...:---.x:..:.:.......::x.x:x...x.x:.x::..xx.x.....:...:.........x..:...:...:...... 10M3I76M 59/86 68.6% 89/94230402 0.0% 3/86 3.5% 3008101 NA +20047 chr4 + 190214555 12797688 12797687 12798190 503 CTGGCTCCTCACAGAGATGC-CATTGTTCCTCTCTGAGACGGTGTCCCTCCCTCTCACACCCTGACCACGGCTTCCCCAAGCAGAGTGTTTATGTGTTGAGTGCAACACTCCGTGGACTTCAGGGTCTAATGGGGTGTGAGAGGGGGCCTGGGGTTTTTCATCTTGTTTTCAGCTGTACAAACACCCCACACTTTCCCCTTCCACTCAGCGTTTAAGCTCAGGCCTGTTAAGATACCAG--AGCTGCAAGGTGTTGGCAGGGACTCCACAAGTCGAAAGAGAGAGACCCAGTGCCTTCTACCCTAACACCAAAGACATGGACAGTGTTTATTTTCTCAGCCTTCACCTAAGCTCTCAGGTAAACATTTCACTGTTTGATATTTTGGAACTTCTCTACAGCTTCGTTAAAAAGGAGGAAGATGGGCACTATTGTTGTCCAAAGCAAGTGGAACCTGCTTCTCCAAAATGCAA----TGAGAG-------------CAAATGAATTAAGAGAT---TTTCTCTCCCAT chr4 - 94230402 13570259 13570258 13570774 80659629 80659628 80660144 516 CTCACTCCTTACATAGATGTTCATTGTTCTGACTCCAGGCTTTGTTCCCTGCTTTCACACATTGAGAAAGTTTTCCACAAACTGAGTGTTTATGTGTTGAGTGCAGTACTCCATGGACTTTAGGGTCTAATGGAGTGTGAGAGGGGGCCTGCGGTTTTTCATCTTGTTTTCAGCTGTACAAACATCATGTACTTTTCCCTTCCTTTTAGAGGCCAGTCTGCGGCCTACTAAAACACAAGCACGCAGGAACGCTGTGGCTGAGACTTTACAAGTCAAACTGGGAGGACCTGATGCCATTCACCTTAACACCAAACATATTGACAGTGTTTATTTTCTCTGCCCCAGCCTCAGCTCTCAAATAAACATCTCAGTGGCTGAT-TTTCAGTGCTCCTCTGAAG-------AAAAGCCTAAAAGAGTATCTATCTCATTGTCAATAACAAGTATAACCTGCT--CTCAGAATAAAAGTGCTGGGAGGAAGAGACGTGTATAAACAAAGGAAAAGATGAATTTCTCTCTTAT ..x:.....:...x.....:-........:xx:::x..:.xx...:..::x..:......x:...xx.x.x:....x...:.x......................::.....:.......:............:.................x................................:.x:::.....:.......x:.:..x.x::.:x..xx.....::...:.:..x..--x..x.x..x.:xx....x.:....::.......:..xx:.:::....:::....x.::...:..........x.:..x..................x...::x:...x........::.......:...x..x:....-...::.x:..:....:x..-------....:xxx::....xx:x.xx.x.::.....x.x.:.....:x........--::..:...:x..----..:...-------------:...::..xx..:....---........::.. 20M1I218M2I138M1D19M7D51M2D12M4I6M13I17M3I12M 354/493 71.8% 516/94230402 0.0% 33/493 6.7% -772571 -93457831 +3252 chr4 + 190214555 12809197 12809196 12809293 97 AAAGAAGGAAGGAAAGAA-AGAAAG-----AAAGAAAGAAAGAAAGAAA-----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGTTTTTTTTTTTTTCTTGTAAGTTTG chr4 - 94230402 64862388 64862387 64862495 29367908 29367907 29368015 108 AGAAAAGATAGGAGAGAACAGAAAGCTTAAATATAATGAAGGATGTTAACTTTTGGAACAGAAAGAAGAGGAAAGAAGGAAAATATTTTTTTTTTTCTTGGAGGCTTG .:.:...:x....:....-......-----.x.x..x...:..x:xx..-----.:..x.:.:.:.::.:.......:....:.x...............x.:.:... 18M1I6M5I19M5I54M 70/97 72.2% 108/94230402 0.0% 11/97 11.3% -52053191 -42177211 +3641 chr4 + 190214555 12834689 12834688 12834771 83 CTGTAACCTCCACTTCCCAGGTTCAAGCGGTTCTCATGACTCAGCCACCCAAGTAGCTGGGATTACAGGCATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..::.:..:xx.x:.:.::........:.x...x..x.:.......x::...........:.:....--.:........::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% -5362437 -88867965 +34097 chr4 + 190214555 12836289 12836288 12837040 752 ATTAATCCTACAGATTGTTCCTGTTGGCAGATAAAT-ATTAGGTGTTAGTTATCAAACATCACATCACCTAGACAGCCCTGGCCTTAGAAATGTTGGCATCTGCTCGTTTCACTGTATGATGGAAAAAAAGAATAAATAAATCATAAATGATTAATTTAGACTTCCCTCCACGTCTCCCGTTAACAGCTCAAAGCCCC-CACCACACAGCAGGCTTAGTGATGAACTGGTGTGGTAGAACCTTCAAGACGGCAGCTAACCCTTCTCCAAGTACAACCAGCTGTGAAAACAAATTTAACTCCACCAACACTGCAAAGGAGCAAAGCTTTTTCATAGGTTAGAGATATAATGTTCACCTCATTCAGAGGGATCCAAACCAAATACCAATGACTTCTGGGGGTA--AGGCTATTAAGCATAATAGATAGATTATCTACTAGTTTACTAAATGTGAAGGAAGAAACATTTGTCATAGTTTTGCTAGAAAATGAGACTTTATCAAAGGGAGAGAGGGTGAAAGGTTACCAGTTCTATTGGTGCGATTATTATCTTTACATAGCTG----------GAGTGGCAAAAGAAATGATCCCAAACAGAGTAAAACAAAACAGACCGCACCGAAGCACTTCAAGATGAGCCCCAAGAAGCCATCATACCAGACCCATTGGCTTCATCTTAATTTATCATCTTGGCCCTTGTTGACAAGAGTTTGATTGGGTTAT----CCATCTATTTAAGCTGCAGCAAGTTTTATCACAGCAAACCAC chr4 - 94230402 13580278 13580277 13581024 80649379 80649378 80650125 747 ATTTATACTACAAATTGC------------ATAAATTATGCTTTGCTAGATATCAAACATCATGTCACACAGACAGCCCTTAGCTGAGGAAAACTGGCATCCGCTTGTCCAATTCCACAAGTAAGAGAAAGTATAAATAAAGCATAAATGATTAATTTAACTTTCCCTCCCTGCCTCCCGTTAACAGCTCAAGGACCCACAGCACACTGTGCTCCT-GTGATGTACCAGTGCGGTAGAGCCTTCAAGACTGTGGCTAACCCCTTTCCAAGTACAAACACCTGTAAAAACAAAATTAGGCCTGCCAATATGTCTAAGAAGAAATGCTTTCCAGTAGGTTATAGATATAATATTCACCCCATTCAGGGGAATCCAAACAAAACACAAATGTCTTATTGGGGCAAGAGGATATTAAGAATAATAGACAGATTATATGATAGTTTATTGAAGGCAAAGGAAGAGACATTAGTCATAGTTTTGTTATAAAATGAGACTTAATCAAAGAG-GAAAGGGTTAGAGGTCATGTGTTCTATTTGTGCTATTATTATTTTTAAATCATTGAGACTTCCATGAGTGGCAAAAGAAATGATCCTGAACAGTGCAAAACAAGCCAGACCTCACTGGAGCACTTCAAGATGAGCCAAGAGAATCCACTGCACGAGCCCTGCTGGCTATATGCTAATCTCTTTTTATG--CCTTTTTAACAAGAG-GTGGTTGGGATCTGGGATCACCTATGT------CAGAGAAGTTTGTCTCAACAAATCAC ...x..x.....:....:------------......-..xxxx..:...x............::....x:..........x:x..x..:..x::.......:...:..::x.:.x:.::.xx:.:.:....x.........x.................:x:........x:.:..................:.x...-..x.....x.::xx.:.-......x..::...:......:..........x.::........:.:...........x..x....:........x...:x:.::....:.:xx.x...:..x..x.....::x:.......x.........:......:.......:..:........x...:..x....x...x.x....:.--...x.......x........:.......x.:x.......:.:..x.::........:.....x............:..x............x.......:.-..:.....x.:....:.:xx........x....x........:....x..x::..----------.....................::.....x.:.......:x......x...:.:..................xx:....x...::::..x..x..:::.....x:..x:....:.x.:x.:x..--....x..:.......-x..:.....x.x.----:..:....x.------...x:.:x...:..x..:....:... 18M12D6M1I161M1I17M1D184M2I101M1D55M10I123M2D15M1D13M4I10M6D26M 552/729 75.7% 747/94230402 0.0% 41/729 5.6% -743989 -93486413 +8937 chr4 + 190214555 12845914 12845913 12846095 182 TTTGGAGACAATCCACGTATCTGAGCACACATGTCCGGGCACTGCTGGGATGAGATCAAATGTTTCCTGTCAGAGCTGGGTCTCAACAGCCCTTGGAGGGCTCTCAGTGACCCCTAGAGCCGGTGTGAAAGTGGACCAGCAGCCAGATGGCTTCACGTTTCCACATTCCTTCAGCTTGTTTT chr4 - 94230402 13583805 13583804 13583986 80646417 80646416 80646598 182 TTTGAAGATGTAACACACCTCAGAGTGCATTTGTCTCTATACTGTGGGGACTAGATAAAGTGCTTCCTGTCAGAGTCCAGTATCAATAGCACTCTGAGGGGTCTCAGTGACCCTTATAGCCTGTGTTCAAGTGGACAAGCAGCCAGATGGTCACACCTTTCTACATTCTTTCACTTTGTTTT ....:...::xxx...::x..x...::..:x....:xx::....:x....:x....x..:..:............::x:..x....:...x..:x.....x............:..x....x....xx........x.............::x...x....:......:....x:....... 182M 132/182 72.5% 182/94230402 0.0% 0/182 0.0% -737891 -93492511 +3142 chr4 + 190214555 12857499 12857498 12857589 91 TTATATACATAAATATGTATATGCATATATGTGTGTGTGGATACACACACACACACACATAAGAATATTATTCAGCCTTGAAAAAGAAGGC chr4 - 94230402 4453214 4453213 4453304 89777099 89777098 89777189 91 TTATATGCTTACATGCATATTTTTGTAGGGATATATGTGCATGCACTCACACACACACAGAGGAACGTTCTCAAATTAAGAGGAAGAAGAC ......:.x..x..:::...x.x::..x:x:.:.:....x..:...x............x.:...::..x.:x.:::xx..::......:. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 8404285 NA +3173 chr4 + 190214555 12867499 12867498 12867562 64 ATACATATATATACACGTATACATACATACATATATACACGTATACACACATACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x....:x.....:.:.:.::.:x..:.x:.....x......:........:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -4653250 -89577152 +3119 chr4 + 190214555 12867523 12867522 12867586 64 ACATACATATATACACGTATACACACATACATATATACACGTATACACCCATACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.:.....x....:x.......:.:.::.:x..:.x:.....x..x...:........:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -4653226 -89577176 +3119 chr4 + 190214555 12867547 12867546 12867610 64 ACATACATATATACACGTATACACCCATACATATATACACGTATACACACATACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.:.....x....:x......x:.:.::.:x..:.x:.....x......:........:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -4653202 -89577200 +3039 chr4 + 190214555 12867575 12867574 12867657 83 ACATATATACACGTATACACACATACATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::.:.:..:::..::.:.x....::..x..:.:.:....:.x.....xx...:.:.:....::.:...x...:.x..:x... 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% 4471787 NA +3295 chr4 + 190214555 12867597 12867596 12867660 64 ATACATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x..::.x.:.:........:.:x..:.x:.....x.:....:........... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -4653152 -89577250 +3383 chr4 + 190214555 12867600 12867599 12867683 84 CATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.::.:..:.:....x.:.::...x..:.:.:....:.x.....xx...:.:.:....::.:...x...:.x..:x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 4471813 NA +3437 chr4 + 190214555 12867623 12867622 12867686 64 ACATATATATACACGTATACATACATACATATATATACACGTATACATACATACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x..::.x.:.:........:.:x..:.x:.....x.:....:........... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -4653126 -89577276 +3290 chr4 + 190214555 12867728 12867727 12867775 48 TATATATATATATACACACACATATATAT-ATACTTTTTTTTTTTTTGA chr4 - 94230402 8681937 8681936 8681985 85548418 85548417 85548466 49 TATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA .........:...:..........:....-.:x................ 29M1I19M 43/48 89.6% 49/94230402 0.0% 1/48 2.1% 4185791 NA +3182 chr4 + 190214555 12873235 12873234 12873297 63 GTGTGTGTGTGTGTGTGTATATATACACACACACACACATATATGTGTATATATATATATACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....:..........::.:.:.....:::...:.x..xx..x::...:...::.....:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -34221929 -60008473 +3065 chr4 + 190214555 12873274 12873273 12873324 51 TATATGTGTATATATATATATACATATATGTGTGTGTATATATATATGACA chr4 - 94230402 66471244 66471243 66471294 27759109 27759108 27759159 51 TGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATATGGTA .:.::.......:..::.......:........x....x...:.....::. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -53597970 -40632432 +3372 chr4 + 190214555 12880104 12880103 12880228 125 ATCTATGATATATAAATAGATATTG-AGATACAGATAGATAT------GGAGATATAGATATTTATATATAAATATCTACATACAGGTATACACGTATACACACACACACACACACACACACACACACATAA chr4 - 94230402 8395736 8395735 8395867 85834536 85834535 85834667 132 ACCTTTAGAATTCAAGTGGAATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .:..x.::x..x:..:.:..xx...-.x.......x::.x..------..xx..:.:x:...x.:.::.....:..x..:x....x:.:..::.x..:.:xx.:.................x.....x..:. 25M1I16M6I84M 81/125 64.8% 132/94230402 0.0% 7/125 5.6% 4484368 NA +3247 chr4 + 190214555 12889580 12889579 12889631 52 AAGCTGCACACATGTATACACACACGTGTATACACACACGTGTATACACACA chr4 - 94230402 28470360 28470359 28470411 65759992 65759991 65760043 52 AAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACA ...:x.:...:...........x..:.....:.......:.::....x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -15580780 -78649622 +33504 chr4 + 190214555 12897874 12897873 12898551 678 ATATTTAAAATGCAACTGGACATTAAAGCCATTACAGAAGCTTTCCAAA-TGGGCAAATATTTGCCTCAATTATTCTATTTACAATTCCAAAAATATTTCTTCTGTTGAA-GTCTGTGTACAAGAAGTGGCTCCAAAACCATTTTTAAGGGAGTTTTGACATCAATGAAACGTTATGCTGGCAGGGAGAGTGAAGTGCTTGATTAATAAAGAGTCTCAGTGTTTTCAAACACATATTCCAAGCAGCCTCATTTGAAGAAAACCACAAACGGAGAATGCTTTGCTGCTCACAGTCACAAGGGGGTTGTGTATTTCATTCCCGCTTACACAGTCCGCTTACTTTGGAGCTTGGGTAGGAAAGAAACATGGCCAGCCAGCAGAAATAAGGCTACATTCAGTGACCCTACCCTTC-CACCCATTGGCCTGATGGGAGAACTTTTTTACCCCT-TAATGCTACTGTTTTCTTAGTTTTTAACCTTTTAATACTTAATAATTCTCTAAAAGACCATCCTGAGAGGAAAG----------AAGGGGACACCTTACGACTTCATTGTGTTAGCAATTGAGGATTCTGAGATTCCTAATTTCAGAATTTCCAGTCAGTGGTGTTGGCATGTCATACAGAAACGTAATTGAGCATGTTCATGTTAATTACTTTGAAGTGCTTTCCTCTT--TTCCAGTGCTTTA chr4 - 94230402 13598372 13598371 13599041 80631362 80631361 80632031 670 ATGTCAGAACTGTAACCTATGATTGAAGATCTTACAGCAGCTTCTCAAACTGGGCAAATATTTGCCTCGATTATTGTATTTACAATTCCAAAAATATTTCTTCTGTTGAAAGTCTGTGTACAAGACACTACTCCAAA-CCATTTTTAAGGGAGTTCTGACATAAATGAAACTTTATGCTGGCATGGCAAGTGAAGTACTTGATTAATAAAGAGTTTCACTGTTTTCAAACACATATTCCATGCAGGCTCATTTGAAGAAAACCACAAGTGGAGAATGCTTTACTGCTTCCAGTCACAAGGGGGTTGTGTATTTCAATCCTGCTTACACAGTTAGCTTACTTTGGAGCTCTGGTAGGAAAGAAACATG----ACCAGGAGAAATAATGCTACATTCAGTGACCCTGCCTTTAGAATCAATTGGCCTGATGGGAGAACTTTTTTCTCTCTCTGCTGCTACTGTTTTCTTATTTTTTAACCTTTTAATACGTAATATTTCT-TGAAACACCATCTTTAGAGGTATGTCTTCTGTCCAAAG----ACTTTACAATTTGATTGATATAG----------TCTTCAGACAGCATAGATGGGAAGCTTTAGTT--TTACATTGACAGCTGACATAGAAA-GTAGTATA-CTTGTTCATAGTCCTTCCTTAGAAATGTTTTGGTCTGCATTCTAATTTTTTA ..:.:x:..x..:...:x:xx...:...x:x......x.....::....-..................:......x..................................-..............x::x:.......-.................:......x........x...........x..x:........:.................:...x.....................x....x.....................::............:.....:x..........................x...:...........:x...............:x.................----:....x........x..................:..:..x-x.:.x.........................x:.:..-.:x................x..................x.....x....-.:...x......:.x.....x.x.----------..:.----..:....:.:..x....xxx...----------.::.x...:xx.xx.xx.x:...x:.::...:--.x:::...:..xx.x.:.:.....-...:.xx.-.x.......:x.xx..x...x...:..:...xx...x--...:.:.x:.... 49M1I60M1I26M1D229M4D40M1I36M1I49M1D24M10I4M4D23M10D32M2D24M1D8M1D37M2I13M 530/654 81.0% 670/94230402 0.0% 40/654 6.1% -700498 -93529904 +3119 chr4 + 190214555 12899606 12899605 12899687 82 TCCATGGATACCAAGGAACGACTATGTGTGTGTGTATGTGTG------------TGTGTGTGTGTATATATGTGTGTATGTGCGTGTGTGTATA chr4 - 94230402 39267117 39267116 39267210 54963193 54963192 54963286 94 TCCATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ......x..::x...:..x:.:.x:..:.:x:...:...:..------------................x.....:..x..::..x:.:..:. 42M12I40M 57/82 69.5% 94/94230402 0.0% 12/82 14.6% -26367511 -67862891 +3038 chr4 + 190214555 12899685 12899684 12899732 48 ATAGGTATATATATGTGTATATGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 4406423 4406422 4406470 89823933 89823932 89823980 48 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATAT ...x.........xx.:..x:...................x:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 8493262 NA +11701 chr4 + 190214555 12925914 12925913 12926385 472 GGCCCCCTGGATACAGAATGTCCACTGTGAGCTAACCAGGAGAAAGAAATCTGGCTTTACAGTGCATGTAATCTGGAGAGCAAGGAAAGAAACATTTAAGCTGTTATTCAAACAAGTTTCATTCCAATTACTACTTTCCTCTCTGTCAGAATCAATTATTCTCAATGTTGACATGGCCATTGCTTGTGGAGGTGATTGGAAGATCTGCTTCCATATTTTTCTCCTGGTGTTTTCTCTTTTCTTCAGCTGTTTTTGGTTGTGGGTTGCTCTATAGCGTTGTTGTTGATTTTCCCACTGGAGCCAGCACCACAGTGTTGTTTTTACATGGCCATAAAATAAAATGAATGTACACAGGAAAAGGAGCTTTGCTCCAAGTCAAGTACAGGACAGCTTAGCTTAACATGC--------------ACTCA-----ATTTCACAAGCAGAGACCTGTTTGAGGGACCTGTTTACTCTCATTGCTTACAGACACAGTGA chr4 - 94230402 13610509 13610508 13610920 80619483 80619482 80619894 412 GGCATGCTGGATACAGAAACGACTCTGTGAAACACCCAAGGCAAAGAAATCCTGCTTTATAGCGCATATAATCGGAAAAGTAAGGAAAGAAA-ATTTTAACTGTTATTTAAACAAGTCTCATTCCAATTACTACTTTCCTCTCTGTCAGGGCCAATTATTCTCACTTTAGACATGACTAGCATTTCTAGAG-------------------------------CCttttttttttttttttttt-------------------------------------------tttttACAATGTATAGAGTGCCGCGCAGTCACTTTGAAATGAGTGAAAAATAAATTAAA-GTACACAGGAAAAGGAGACTTACTAAACTTGAAG---ATATCCTCTTATTTTGTCATACCAAGGCACATTAAAACACAGAAGGACTTTACAAGCAGTAAAGTGTTTTGGACATGCATTTATTTTTACCCCTTAAAGTAATAGTGA ...x:x............xxxx.x......:x:.x...:.:x.........:x......:..:....:.....x.:.:..:...........-....x.:........:........:...............................:::............x.x.x......:.:.x:::..x.:...-------------------------------...xx.x....:.:....:..-------------------------------------------....:x..x..x.xxx..::..:.:xx..:::...x.x...:x::x........x.:..-.................x:..:..xx.xx.x...---.x:x.xx....x:..:x...:.--------------..x..-----.:..:........x:.xx.....x:.:x.:x::....:.:.:.::x....x..xx.:..... 92M1D98M31D21M43D59M1D34M3D22M14I5M5I62M 277/393 70.5% 412/94230402 0.0% 98/393 24.9% -684595 -93545807 +3038 chr4 + 190214555 12930847 12930846 12930923 77 TGTACATATATATTTTTCCATTTATTTATTTTTGCTAAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 33215660 33215659 33215736 61014667 61014666 61014743 77 TGAACATGTGTTCTTCATCAGTTGCTTTTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCT ..x....:.:.x:..:x:..x..::..x.....x..:..xx::....::.....:.....:...::.:......::. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% -20284813 -73945589 +3058 chr4 + 190214555 12930857 12930856 12930932 76 TATTTTTCCATTTATTTATTTTTGCTAAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67040332 67040331 67040407 27189996 27189995 27190071 76 TATTTCTGTATTTCCATATTTTTGATGTATTTTCCATTTTTTTCTGTTTTTTTTTTTCTGTATTTTCCATATTTTT .....:.x:....x:x........x.:x..x.:::x.......:.x...........:.x.x....::x.x..... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -54109475 -40120927 +3088 chr4 + 190214555 12930869 12930868 12930922 54 TATTTATTTTTGCTAAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 48703063 48703062 48703116 45527287 45527286 45527340 54 TGTTTATTATCACTGAATGCCTTTTTTCTATTTTTTTTGTTTTTCCTCTTTCTT .:......x.::..:....:.......:.x........x.....::.:...:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -35772194 -58458208 +3146 chr4 + 190214555 12930874 12930873 12930933 60 ATTTTTGCTAAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 35007531 35007530 35007590 59222813 59222812 59222872 60 ATATTTGCTTGATATCTTTTTTTTTTCTTCTTCTTTTTTTTCCCTCCATTTCCTCCTTTG ..x......x:..:............:..:..:........:::.::x...::.::.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -22076657 -72153745 +3244 chr4 + 190214555 12930882 12930881 12930942 61 TAAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-TTTTTTTTTTTGAGGTAGAAT chr4 - 94230402 53202567 53202566 53202628 41027775 41027774 41027836 62 TGAATGTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTTGTGAAGTGAAAT .:.........:.::.....:.::............::.:-..:......x...:..::... 40M1I21M 46/61 75.4% 62/94230402 0.0% 1/61 1.6% -40271685 -53958717 +11936 chr4 + 190214555 12933756 12933755 12934243 488 ACAATTGGATGTGAAGTCTATTTTTGC----CAATGAAGCAATGAGGCAAAGTTCACAGCTGAGGA-CAGCCACACTTTGCCAACAGTTAGCTTAAACAAGGAGAACTTT---GACACTTGTGGTAAGGGGGAAACCTTTTCATGAATTGCTGCTTTATTGAAACCTTGCCTAGCAGATGCAGTTTAAGT--GGAAAGGGAATTTCTGCTGCAGTTTATAGGACTGTGGGGGTCAGAGGCCAACCAGGGC-CTTCTGAAAATGGACTGGAAGAGCTTGCCTCTTCTAAGACAGCCCCCATATTTTCA---CTTATGACAAATATTTGGAAATTAAATAATTATCTTAAGGAAG-GCATGATGCCTTTTAC---AGCCTGAAATCCTGAGGGTTGCCATGGCTGTGAACTTCAGAGTTTCCACAGCATTTCTAAATATTTGCAGAGAACCATTTCCTGTTTCAAGAATGACAAAAGTCTAACTTGAAGAGTGAACATTTTAGTGCTG chr4 - 94230402 13613604 13613603 13614101 80616302 80616301 80616799 498 ACAACCGGGTACAATTTAGATTTATGCAGAACACTGAAGAAAAGAAGAAATATTTGCAACTGAAACTCAAAAACATTTTACCAAGAGTTTACTTAAACAATATGAAATTTACTGACACTT-TAACAAGGAC-AAGCATTTCTCTGAATTATAGCTTTATTCAAACACTATGCAACAGACACAGTTGAAAGCGGGTAGGGAAATTTCTGTTAGTTCTTATAGGCCTATCAAGGTCAAAAGTCAATTAGAGCACTTCTTCTAATTGAAGAGATGAAATTATTTCCTTGCTGCCTTCCACAGTGTGTCCTGCTTTTACAACAAATATTTATAAATTAAATCTTTCTGTTAGGAAAATACATGATTCATTCTACCCTAGGCAGACATCACTGTAGTTG---TAAATGTGAAAAACATAGTTTCTA--GCATTGGTAAATATTTGCACAGAACCATTTCCTGTTCCATGACT-ACAAAAGTCTAGTTTTGTTAAAGACCCATTTAGTGTTG ....::..:.:::.xx.xx....x...----..x.....x..x..:.x..x:..::..:....::x-..:xx...:...:....x....x:.........x:x...x...---.......-.:::....:x-..:.x...::x......::x........x....x:.::x:.:....::.....x..:x--..x.:..:........:.:xxx:.......x..:.x::.....:.:.:...::..:..-.....xxx...x..xx:..x..:x..:::..:.:xxx.x.xx..x.x:.:.x.:.x---:...::..........:x.........xx..x.x...:.:..:-:......x.x..:...---..x.x..x...x:x:x:....---.::x......xxx..x......:.--.....xx............x................:..x..x.-...........::..x:xx.:x..x.xx.......:.. 27M4I35M1I43M3I7M1D10M1D58M2I58M1I56M3I43M1I16M3I21M3D24M2D44M1D38M 319/480 66.5% 498/94230402 0.0% 26/480 5.4% -679848 -93550554 +27189 chr4 + 190214555 12949163 12949162 12949880 718 ATAAAGATTAGCCTTTTTCATCAATT------TAAAAATCATGAGAAAATAAAATTTTTAATTCAATAGG-GTCTCTAAAGATCTATTTCT-TAAAACTAAATATAACCTGC---TTTTAAAAGGGAAC----ACAAAGATGTGAAACAAGAAAATGAATTAAAAT-------TCCTTAACATTTAAACTTTCCTAAGTGAAAA---------CTTTTCACAGGCCTGATAGTGAGGGATGAGCTGGAACTCTG-TGGTGGGAACAGTGCTGGGGGTTTATCTACAACGACGATGGTTAAAATCCGGGACCTTCTTGACCTGTTCAGTGGTGGGTTTACATTGAAACTGTTATAAATTATTACAGAGGTGAAGCCAAGCCAAACAGTCCAACATAAATATATCTGCAGACATACTGGCTACTATATATTCTAAACACTGTCGGTAAATGAATAAACAGAGCTTTCTAAATCATTTAAGAAAATATATTTATTCATAAAATCAATAATTTTCAGTTTTCAGTTTGAGCCTCCTAAAAAATGAGAGACCTATTATAACTAATTTTTTGGAATCCGTAAA---TATCATGGATTCCCAAGCTG-CTCCCTTCCTGCGATAATGGCC-AGAACCTCACACTTCTCTAAGTGATGTGTGAATGTTTTT--CAGTTTGGACACTTGACTAATCTCTACCTGTTGAAATTG---TTCCACTGCATTACACAAGTTAAATATTTGAGCTCCACAATTTCAACAGACTG chr4 - 94230402 13618058 13618057 13618777 80611626 80611625 80612345 720 ATGAACAGTAGCTTTCTCTTTTGAGTGAGACGTGAAATCAATGAAATGGCAGAAATTTTGTACTAATAAGTGTCAATGAAGAGTTACTGTTATAAAACAAAACaaaaaatatatattttaaattatCACCAGTACTAGAATATCAAACAC-------AGTTAAAATACAGCCTTTATTGCTCTTTAAATTTGCCTAAATAAAAAAACAAATTCCATCCCAAAG-----ATATTCAAGGATTAACTAGAACTTTCCTGCAAGAAATAGTTTTGTGGGTTTATCTGAAATTATGATGGTTAAAATGCAGGACCTTTATGACCTGCTCAATGGCAGGTTTACATTGAAACTGTTATAAATTATTACAGAGGTGAAGCCAATCTAAACAGTCCAACATAAATATATCTGCAGACATACTGGCTACTACATATTCTAAACACTGTCTGTATATGAATAAACAGAGCTTTCTAAATCATTTAAGAAAATGTATTTATTCATAAAATCAATAATATTTATTTTTGTGTTTGA------CAAAAA-----AGGCCTATTATATCTAACTTATTGGAGCCTGAAAACTTTTTTATGAATTCTTATGTGGTTTTCCTACATCTGATAATGGTTGAGAATTTTA-----TTTTGAAT--TATGTGAATGTTTCTAATAGTTTTTGTATTTGACTAATCCTTACCTGTTTAAATTGTTATTTTATTAAATTTCACAAGTTAAATATTTGAA----------TCAACATACTG ..:..x.x....:..:.::x.::.x.------.:...x:x....:.x:::.:..x....:xx::....:.-...xx.:....x:..:.x:.-......x...:.x..xx.::---.......xx:xx..----..x.::..:.x.....x-------.:.......-------.:x..:x:x......:..x.....:.:....---------.x.::..x..-----...x.x.:....x.:..:.....:.x-..xx:.:..:...x:..x..........:x..:x.:............x.:.......:x.......:...:...::.............................................x.:...........................................:.................x...x.....................................:.......................x..:.x....xx......------:.....-----..:.........x....:..x.....::.:.x...---.x.:...:....::.x.:x.-:.:...x.x.x:........::-....::.:.-----:.:.:.:.--.:...........:.--:.....xx::.:..........::........x......---..::.:.:x...x..................:----------......x.... 26M6I38M1I20M1I20M3I14M4I17M7D9M7I31M9I10M5D26M1I270M6D6M5D35M3I20M1I22M1I9M5D8M2D15M2I39M3I32M10D11M 518/678 76.4% 720/94230402 0.0% 82/678 12.1% -668895 -93561507 +5945 chr4 + 190214555 12971912 12971911 12972155 244 TTCTAAGGTTTCACCACTGAACTTAATTTGCCTCTGAGATTTGAATTATTTTTTTCTTCTTTTCTTTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTAATATGAGTGCACCACTTACTCTTTGGGGAAAAAGGAACAGTTTCTAAATTATTGGGTACTGAGGGACTACCAAAACCAGGAAATTCATGTTTTATGAGTTTTCCC-CAAATCAAAGCAACAGGGTTATGGTCAACATCATCCTTT chr4 - 94230402 13631889 13631888 13632088 80598315 80598314 80598514 200 TTATAAGGTTTTACAGCTCAGCTTACTATGCTCATGAGGGTTAGAACATGGTTTTAT-------------------------------------------ACAAGGGAGAACTAGCTAAGGTTTGGGGAAA--GCAACATTTTCCATATTATTGGGAACAGTGGGACTAGCAAAATCAGGAAATTCATGTTTTACAAGTTTAAATGAAAATCAAAGTTACATAGTCATACTAAACATCACTCTCT ..x........:..x:..x.:....x.x...::x....:x..::.x:..xx....x.-------------------------------------------.:.x.:.x.x..:.x:..xxx..........--.x....x....:.x.........x..x.x.......x.....:..................::.....xxx:-x.........:x...x:..:..:x.x.......::..:. 57M43D31M2D72M1I39M 141/199 70.9% 200/94230402 0.0% 46/199 23.1% -659977 -93570425 +17393 chr4 + 190214555 12979377 12979376 12979869 493 AAGATTTAGGCTTTA---TCCTTTGTTTGT-GTTCTCCACTTGTGATTTGTATTAAATTCACT-TTGGGACA-----CATACCACAAGGTACAAGAGGGCTTTTTGATTGAAAAGTGAAAGGAGCCTATTAGAAATGTGAAATCATAATTTCTGGAGGTTTGGGGA-------TTTAAAAAAATGTGGACAGCTGCTGGCTAAAGAACTGAGAAACGTTTAAGTCAGAAAAATATTCTAGGCAACGGAGCCAGAGAACCTAAATC--AGTGGCAAATACTGCTAAGCCATCATTACATACTAAATAGTTATTAGTCATCTCTTCGTTTTAAACAGAAAGCTTAAGGGTCTGAAGTCCAAAGCTTAGACTCCATTCTTTCTAACAAATCA-AAAATCCCATCCCTTCCAATAACAGAAATCTGCCAAGAGAACATTAAAGGTCACGCTAAACCCACAAATGCAAAGCAATGCAGATTTCAAAGACCTCGAGTGGA---AAAATACAATTAAAAGTCA chr4 - 94230402 13633646 13633645 13634155 80596248 80596247 80596757 510 AAGATTAAAGTTTTAATTTGTTCTGCCTGTCTTTCTCTAGCTAT--TTTACATAAAGTTTTCTATTATGACATACCACATGCTAGAGGGCACAAGAGACCGTTTTGATTGTGCAGTTAAAGGAACCTATTAGAAATATGAAATCATTATTTCTGGACGATTTGGGACTTTTTTTTTTTTTTCCTGCGGACAGCTGCTGGCTATAGAACTGAGGCAAATTTAATTCAGGAAAATATCCTAAGAAATGGAGCCAGAAAGGCTAAATCAGAGTGGTAAATATTGCTAAGCCATCATTACTCGCTAAATAGCTATTAGTCATCTCTATTTTTT-TACTACATGCTTAAAGTTCTAAGAGCTATTGCTTGTGATACATTCTT--AAACAAAACAGAAAAATCTATCCTCTAAAACTGTACAAGTCTGCCAAGGTAGCCTTGAGGGTCTAGTTTAAATCCCTGAAGTAAAGAATTCCACATTTCAAGGA-TTTAAGTGGAAATAAAATAAAATCCAGACTCA ......x.:.:....---.x:.:..::...-x.....:.x:.:.--...::..x..:..:x..-..:x....-----...:.:.x.:..:.......:x.x.........x:x...x......:............:.........x.........x.x..x....-------...xxxxxxx..:................x.........:x.x:.....x....:.......:...:.x..:.........:.:x.......--.....:.....:.................x::........:..............x:x....-x..x:x.x......:.x...:.::x.:.xx....:x:x.x.......--x......x..-....x:.:....::.xx..:x::.x..:.........:x.:.x..:.:....xx.:.x..x:.x.x:.x.:....x.x.x..x.......:..-:.::......---......x...:x.:.x... 15M3I12M1I13M2D17M1I8M5I89M7I92M2I62M1D47M2D10M1I93M1D10M3I19M 353/487 72.5% 510/94230402 0.0% 29/487 6.0% -654269 -93576133 +3053 chr4 + 190214555 12980512 12980511 12980586 75 ATAGGTAAATACATGTGTGTATATATATATATATATATATATATATATACACACACACACACATATATATAGATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:x..:x...x.::...:.x..:....:...::x..:..xx...:.:.............x.:.:.x..::... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 4584716 NA +3073 chr4 + 190214555 12988204 12988203 12988259 56 ATAGGAGTGGAAAAAAAAGTAGACTTCTTATAAAATTAAGCATCTGAAATTTGGAG chr4 - 94230402 51530455 51530454 51530510 42699893 42699892 42699948 56 ATACGGGTTGAAAAGAAAGAAGAATTCTTACTGTATTGAGCATTTGAAATTTAGAG ...x.:..x.....:....x...x......:x:x...:.....:........:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -38542251 -55688151 +3047 chr4 + 190214555 12991954 12991953 12991990 37 ACAAAAAACAAAAAAAAAGAGAGAGAGAGAGATACCA chr4 - 94230402 76845957 76845956 76845993 17384410 17384409 17384446 37 ACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCA ........x.......................x.... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% -63854003 -30376399 +3069 chr4 + 190214555 13000564 13000563 13000606 43 CTCCATCTCAAAAACAAAACAAAACAAACAAACAAACAAAAAA chr4 - 94230402 81661600 81661599 81661642 12568761 12568760 12568803 43 CTTTATCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAAA ..::...::x....x............................ 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -68661036 -25569366 +3324 chr4 + 190214555 13000565 13000564 13000610 46 TCCATCTCAAAAACAAAACAAAACAAACAAACAAACAAAAAACCCC chr4 - 94230402 13130823 13130822 13130867 81099536 81099535 81099580 45 TTCATC-CAAAAACAAAACAAAACAGAAAAACAAACAAAAAACCCC .:....-..................:.x.................. 6M1D39M 42/45 93.3% 45/94230402 0.0% 1/45 2.2% -130258 -94100144 +3181 chr4 + 190214555 13000570 13000569 13000608 39 CTCAAAAACAAAACAAAACAAACAAACAAACAAAAAACC chr4 - 94230402 49148766 49148765 49148804 45081599 45081598 45081637 39 CTCCAAAATAAAACAAAACAAACAAACAAACAAAAAGCC ...x....:...........................:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -36148196 -58082206 +3026 chr4 + 190214555 13000573 13000572 13000606 34 AAAAACAAAACAAAACAAACAAACAAACAAAAAA chr4 - 94230402 38540320 38540319 38540353 55690050 55690049 55690083 34 AAAAACAAAACAAAACAAACAAGCAAACAAAAAA ......................:........... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -25539747 -68690655 +41226 chr4 + 190214555 13007655 13007654 13008508 854 GGCAATTCCTTTTAAGTTAACTGTGAATTTCATTTTAAATCCCTTCATCCCCAGGCTTAATATTATTACAAATAAAACATGT----------TTTAACCCATGTTCCTATA-AAATATTTTTT-----AGTAACACATATATGGATTTGTCTCAGAGGAATTCTAATAAACATATTGAAATCTACGTCAAATCTTGGTTTGATGTCTGATA----------------ACTGTGAATGCAAGGAAAACCTATCTCAAAGTTTCCCTTTAGAAATCAACCTCAAATAACCACTCAGTGTTCAAAGTCAATTCCTATTAATGCTTGTACATATGGTATTAATTCCACATTAATTCTGTCAAAAGTGATATCATAGTTAGAAGTTCCAAATGATGACATCACTAAAACAACTT-GCTTTTCATGAGTGTGGGACCAGTCAGTGCCAAAATCCAATTCAATCTATTCAT-CTGTCTATTCTGACAAGTTCAGTTTAATTAGTTCATGGCCTCATAACGAACAAGAGACTGGTTTTCTGTCCAATTTCCAGAGCCATTTCTATTCTCTTCAACTTAAGTGCCAAATGCTTACGCTGCTTTGCCCAATTTATACCTTTGCCTATAATTACTGGTCCCCAAGGTGTGATTGTCCTTTTTCATAAGAGTTTGTGCAGCTGCCAACATGAAGTTGTAAATAAATTGTAATACCGTTGCTATGAGGTGTAAAAATCCCACAGCTCATATCCAGAGCCTTGTATAATAAACTCAAGTAAACATTCCATTTCCTGCAAGTGATTGTGGTCTGTGACTAGATTTAGAAAA--CAGGGCAGTAAGTCATC-----TTTCTTTAATGAGTCGTTGAAAACAAAGTCGTATCC-CATGAAACCAAAACCTGTC chr4 - 94230402 13643208 13643207 13644077 80586326 80586325 80587195 870 GACAATTTATTTTAAGTTTAC----AATTGC--CTTAAAATTCTTCCCTTACGCCATTGATTTTGTCACCATTAAAA-ATGTAGCACTGAAGGTTAATTGCTTTTCTTATGCAAACAGCTTTTGAAATAGAGGCAGAAATGTAAAG----CTTAAATGCTTTCTTATAAAAGTGTTGAAATGTATTTTAAAT------TTGCCTTCTGATACCACATTAATGTAAGCACTATGAAAGAAAAAAAAA--------AGGCTGTTACTTTGGAAACCGACAGAGACTTATCACTGGGTGTTCAA-TTCAATACCTATTAATGCTTATACATATGGTATTAATTCTGCATTAATTCTGTCAAAAGTGATATCATACTCTGAAAGTCCAAATTATGACATCACTAAAACAACTTTGTTCTTCATAGGTTTGGAGCATGACTGTGCCAGAATTGACTAGAATTTATTCATGCAGCCGATTCTGACAAGTTAGGTTTAATTAGTTCATGCCCTCATAATGAACAAGAGGCTGTGTTTTTGAAGATTTGCCAGAATAGTTTCTATTTTCTTCAACTTCAGTGCCAAATGCGTGCACTTCTTTATACTATTTATACCTTTGCCTATAATTACTGTTCCCTAAGGTGTGATTGTCCTATTTCATAAGAGTTTGTGCAGCTGCCAACATGAAGATGTAAATAAATTGTAATACCGTTGCTATGAGGTGTAAAAATCCCACAGCTCATATCCAGACCCTTGTATAATAAACTCAAGTAAACATTCCATTTCCTGTAAGCGATTGTGGTTTGTGACTAGATTTAAAAAAAGCAGTGCAGTAAGTCATCACTTTTTTTTTTAATGATTTGCTGAAAACAAAGCCACGTAAGCATGAAACAAAAAACTACC .:.....:x.........x..----....x.--:.....x::....x:::x.:xxx..:..x..:.:..x.x.....-....----------x....::xx.x...:...:-...:.x:....-----..x::..x.x..:.::.x----..:.:.x.xx....x.....x:.:.......x..:x.:....------...x:x.......----------------...:....x.x..::....--------.::x.x.:x....:....:.:..xxx:.x.x.:....x:........-x.....x.............:..................::............................x.:x...:x.......x.....................-.:.:.....::..x...::.xx.x.x......:...:x.x.xx...:.......-.x.:.x.............x:................x........:.........:...xx...:..xxx.x..x.....::x:........:..........x............x.:.:..x....::x.x..........................x....:................x..................................x............................................................x......................................:...:.........:..............:....--...x.............-----...:........x.:.:...........:.:::.xx-........x....x..::. 21M4D6M2D44M1D4M10I19M1I11M5I18M4D42M6D13M16I19M8D47M1D107M1I54M1I351M2I17M5I36M1I19M 662/828 80.0% 870/94230402 0.0% 68/828 8.2% -635553 -93594849 +3232 chr4 + 190214555 13016447 13016446 13016520 74 GAGATTCCATTAGGAATCCAAAATATCCCAATAAAGAAAATTCCAGTACCAGATGGCTTCACTGAAAAATTCTA chr4 - 94230402 65492459 65492458 65492532 28737871 28737870 28737944 74 GATATTTCATTAGCATCCCAGAGTATGCAAAAAGAAGGAAATCCAGTCCCAGAGTGCTTCACAGAAAAGCTTTA ..x...:......x.x:...:.:...x.x..x.:.:::..x......x.....xx.......x.....::.:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -52476012 -41754390 +47076 chr4 + 190214555 13040346 13040345 13041605 1260 TCTCCAGTACTATTATTTGACCAT---TTTTCTATTTAGAACTCATTCAAGCTTATATGGCATATTACATTTAATTAATTGAGTGTTTATGCATTAAGGAGTTATTTGCTTGTGACTATAGTGAAATTTCCAGGATTTACGACAGGAACGTTTCAGAACAGCGACATGTGTTTCCCTCCGATTTGTATAGCTTCATTCATTATAATTTTTCCTGATGTTTTGCCTACCATATTATTAACTTCCCCAAAGCAATGAAATACCAGCTTGTCTTCTCACGGCAGAGAAATGAGAGGAATAATTATGAATGTGGAAATCCCAGTGAAAACATGCTTCTATTGAAAGAGGCTAGTAGTCCAAGAAGGAGCTCCCCTAGATTTATGGAGACCACTAAAAGAAAAAAAACACACACACACAAGAAAACAGATGCATTTTTTTCATCC-AGTATGCTGGATGTCCCATATGCAGGGGAAA------GAGATTATATATAAATATATTATATATGTATATGTATATGCATATATGCGTGTGTGTATGTGTCATGCTGGGAAAGAATTTATATTTTACTACAAGTTATAAAGTCTAAATAAATCATCAAGGTTACAAGTGTGTGCCACGCATAAATATTTAATCACTGCAAAGTGTTCTTTTCAAAATGTAAGGGTTTGTAAGCACAGTGTTTGATTTGTAACTGACTCCAGGGGCAATGTT--------------GAGATGTGTTCCTCACAACTCTTGGCTACTTAAGATCTTACAATCATGAGGAGGAGGAGAGTGTT--------------AGGCAGATTTCAAT--GCCTGTCAATGAAAAGACA-TAGAATAGTCTGGGAAATCAATTCCAGTCAGGGCTGTAGATCAGCAGTTATTTTACAAAGAGCGAGGGCTGACAGGACCACCACAGTCATTCGTGTTTATTGTTCAAACAGGTG--TTTGGGGGCCATCC--AGGCTCAATGCAGATCATGTGAAGAAACCAGCAAGGGGCAAGTTTAGGGAGAAAGGAAGAGGACAGTAAGGGGCCAGGCAGCAGGAGAGG----------------GCAGGGTGTAAGGACAG--------------GCTTGGAGGCAGCCTTCCCCCAGTTTGAGATGGTGTTTGTCTTATGACATCCTGCAGCCTCCATTGTTATTTCTCACAACATCACGACTGGTGTAGGCACTCTGTCCATCAGGGTGGCCTCTTCTCACAGGAAAAAAAGAAGCCCTTGATTTACATTCTGCCTTTAGAAATGTTCCCTGCCTTTCTGCTTCATGTTG----------CCATGTTTTCCTTGCCTACCCTGATGTT chr4 - 94230402 13658304 13658303 13659563 80570840 80570839 80572099 1260 TCTTGAATGCCATTATTTGAATCTGTCCTTTCTGTGTCACACTAGTTTGAGCATATATAGTATATTACCTTTAATTAATTGAGTGTTTATGTGTTAAAAAGTTATTCACTTGTGCACAGAGTGAT-TTGCCGGGATTTATGATGGGAACGTTTTATAACAGCAGCATGTGTTTCCCTACAATTTGTATAGGTTCATTCATTATAATTTTTCCTGATGTTTTGCCTACCATATTATTAACTTCCCCAAAGCAATGAAATAGCAGCTTGTCTTCTCACAGCAGAGAAACGAGAGGAATAATTATGAATGTGGAAATCCCAGTGAAAACATGCTTCTATTGAAAGGGCCTAGTGGTCCAAATAGAAGCT-TGCTGGATTTATGAAGTCTAT--------AAAAAAAGCAAACATACAGAAAAACAGATGCTTTTTTTTCTTCCAAAAATCTTGGAAGTCCTACACTTAGGAAAAAATGGGGGAGGGTGGAGAGGGAGAGAATGT---------------TACATTTATGC--------------CGCTATTAACAAAAATTTATACTTTACTATAGGTTATGGAGTCCGAATAAATCATCAAGGTTTCAAGCCCTTGCCATACATAACTATTTAATCATTTGGAAGTGTTC-TTTCAAAATGTAAGAGTTTGTGAGCACAGTGTTTGATTTGTTGCC-CCTTCAGTAGCAAAATCACCTTTGCTTCAAAGGGATA-GCTCTTTAGGACTCCTTGC-ATGTAAGAATTTAAAATAATGGGAAAATGAATAGCATTCACCGACGGTGGTAGGGGAAATTTTTTCCAGCCTGTCAGTGAGAAGGTAGGAGGAAAGCCTGTGAAATCAATTCCAGAAAGTGTTGTGGATCACTGGTTATTTTACAAAGATCCAAAGCTGACAGGACCACCACAGTCATTTGTGTTTATTGTTAAAGAGGGTGCCTTTTTGGATCATCCCTAG---CAAAACCAACCTTGTTTAAGAAACAAAAAGGG--------AGGGGGAGAGGGAGA----AAGAGGGAGCTGGGAGGCAGTGTAAGCAATGAGCCCGCTCCAGCCCTGCTCCAGGAGAGCCTTCCCCACCGCTGCCTGGCCCCAGCCCTCTCTTAG--------GCACTTTGTATTATTACAT-GTGCACTCTTCATTGTTATTTCTCACAACAATCCGATCTGCTTCTGCACTCTGT-CGTCCGGGTGGCCACT-----CATAAAAAA--------CGTGATTTACATTCTTGTTTC----ACTCTCGCCACCTTTTCGCTTCCTGTTGCTTCTGCACTCCACACTTTGCTTGCCTTTTCTGTTCTT ...:x.:.:.:.........x:x.---:.....:.x.x:x...x:..::...x.....:.:.......x......................::....::.......::......xx:.x.....x-..x..:.......:..::.........:.x......::.............x.:..........x....................................................................x................:.........:.......................................................:.x.....:......:x..:....-:x..:........:..x.:.:--------......x:..x...:...::...........x........x...-.:x..x:....x....:.:.:x:...::...------...:x.:x.x.x::.x.x.x.:.---------------.:...x.....--------------.::xx.x::x..:........:.......:.:.....::....::.................x....:x:x.....::.....x..........:.xx:........-..............:......:...................x:.:-x..:...x:....x:.:--------------.:...:-.:..:.:.x:....:.x..-.:x.....x:...x...x...:.:.::x.:.x..::..--------------:..x.:....:xx:--........:...:...::.-x..:.x..:...x..............xx..x.:...:.....x::...............x.x.::........................:............x..:x:....--...xx..::.....--..---...x:.x:.:.x...xx.::..x..:x.....--------....:..:...:...----.:x.:..:..::..x:....x:x.:.----------------..xxx.:x:x....x..--------------..:...xxx.....:..:.::..--------.xxx.....x....x....-x....x:..:....................x:x...::x.:x.xx.........-.:..x........x..-----..x:.....--------.x.............xx:..:----.:x:..x.::.....::.....x.....----------...:::...x.......x::...x.x.. 24M3I98M1D240M1D21M8D44M1I31M6I23M15D11M14D107M1D45M1D17M14I6M1D19M1D38M14I14M2I19M1I114M2I14M2I2M3D32M8D15M4D26M16I17M14I23M8D19M1D54M1D16M5D9M8D21M4D28M10I28M 888/1175 75.6% 1260/94230402 0.0% 170/1175 14.5% -617958 -93612444 +25008 chr4 + 190214555 13055590 13055589 13056219 630 AATAAAAAATGAAATAATTGAGATGCCAACAAAAATCTTTTACAAATTCTCCCTTTGCAAAGGCAATTCCACTTGTACTTTGATCTTTGACCTGGACCCATACAATTAATTCCACATCATATTTCTGCATATTGCTCTCCAAGGAGAATCAAGTTTACACTTCCC-CCCAATCCAAACCATAACAGTACTTAATTAGGTGACAATTTATGTAGTACTTAGCATGAACTTTTGGCACTTGCTGGAGAAGGCTGTACAAGTGTACACGTGTTATCACCTGACTACATCAAGAAACGGGGCCTGGGCATTGGCGAGGTTTCTTGGGCTTTACAAGGTATCAAATGACTTTTATAACCCTGTAGTACCTGGCTTTCTAGTAGG-CAGGACTGTCTCTAGTGTGTATTAATATACTAAATATTATGCCCACATGCACTTAAAACACTGATTTTTGAGCACTCCAAAACAACAAGGAGCCTAGAAAATCAGAGAAACAGATGTTGGATGAAT-----AGTAGGCCTTCTCAGAGTCCATCATTTAAC------TTAAGGGAAATG-------GCACAACAGCGGAAGGGAATCATTCAAACCCACTCAGTGAAAAATAAACAGAGTGTTCCCCAATGGCAGACATGGTCTGTGGTG chr4 - 94230402 13668326 13668325 13668934 80561469 80561468 80562077 609 AGCAGAAAAGGATTTAATTAGGG---AAGCAAAGATTCCCTTCTAGTTCCTCCTTC-CAA---CAAATACGTTCAGACTTTGATCTTTGACCTTTATTCGTAAAATTAATTCTACATCATATTTCTGCATATAGCTCTCTAAGGAGAATCAAGTTTACACTTCCCTCCCAATCCAAACCATAACAGCATTTAATTAGGTGATAATTTATGTAGTACTTAGCATGAACTTTTGACACTTGCTGAAGTAGGCAATGTGAGTGTACATATGTTATCACCTGACTACATCAAGCAACAGAACCTACACACTGGTCAGGTATCTTGGGCTTTTTAAGGCATCAAGTAACATTTATAACCCTGTTGTACCTACATTTCTAATAGGTTATTCCTGTCTCCAGTGTACATTACTA----------TATGTCTGTGTGTTCTTAAAGCACTGA-TTGTAAGGACTTCAAAACAATG--------AGCAAATAACCAAAACAGATGTTAAGAGAACTTGCAACAAGATTGTATGAAACTTTGTCACTCAACTCAGATTTAAGGAAAGTGCTCTGCTGACCAACATT---------TCATTTTTGCCCACCCAAT-----ATGatcacagaatcacagaatcacaga-atggcctgtgttg .::.:....x..xx.....::.:---x.:....:..::::.x.x.:...::....:-...---...x.x.::.::x.................xx.::.:..x.........:...................x......:.........................-....................:.:............:..............................:.........:..x....x:.:::........::.......................x...:.::...:x:..:...:x....x...........x:....:.....:.:..x.............x......:xx......:....-:.xxx.......:.....::....x..----------....:.::::..:x......:......-..x.:..x...:........::--------..x....x.xx:...........:::x...:-----.xx..:::x.x.x.:.x.:::...:.:...------......:..:..-------.xx.....x:---------.....:xx:.....:..:.-----..:.x..x..x:.:x.xx...x:....-....:.....x.. 23M3D30M1D3M3D102M1I213M1I27M10D27M1D22M8D31M5I30M6I12M7I10M9D19M5D27M1D13M 444/589 75.4% 609/94230402 0.0% 61/589 10.4% -612736 -93617666 +3035 chr4 + 190214555 13062481 13062480 13062554 74 ACATACTTGTATATATATACACACGTATATATATATACTTGTAGATATATACACGTATATATATATACGTGTGT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x...x..:..::..........::.x.....:...:..x.:x..::..::::x.::..:.:x...:...... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -58567651 -35662751 +16413 chr4 + 190214555 13077492 13077491 13077816 325 GTCATCTCACATGACATTTTTATCGCCTGCTTAACATTTCAAATGAAACATTTTATTGCATTTGATG----TTAAACACTTAACGTGTACTCTTCATGCTCACAATTCCCAACGTGTTCTGACTATATTAAGCAAATATTGAAGAAACATTTCG-------GCTGTTTTTT--ATATTTAAGTATTTAATCTGTAATAAACCTATAGCATGTTAAAAATACACTTCATGTA--CAGT-----ATGTGTTAAGTGTTAAGAATATATTTTTGAACTGCCCTCTTTGAGCCTGTCAAACTTTCCATTACAACCCCTAATTTAAGAGGTTTTTTACCCAACCATAAAA chr4 - 94230402 13673136 13673135 13673479 80556924 80556923 80557267 344 GTAATTCTCCATGACATTTTCATCACCTGCTTAACATTTCAAATGAAACGTTTTATTGCATTTGATGTTGTTTAAACACTTACCATGTACTCTTCAGTCCCACAGTTTTCAATGTATTCTGGCtatattaaataaatattttaaaaaCAGTTGGAATATGTGCTGCTTTTTCCATTTTTAAGTGTTTAATATGTAACAAACATGCAGTATGTCGGAAATATACTTTATATATTCAGTCATTCATGCATTAAGTATTAGGAATGTATTTTTGCATTACGATAGTCAAGTTTGTCACATTTTCCATTACAA-ACTTAATTTCAGAGATTCATAACTTCTCCATAAAA ..x..:::x...........:...:........................:.................----...........x.:...........xx.:....:..::...:..:.....:.........::.......xx.:.....x..x.-------....:.....--..x.......:......x.....:....x.::..:....:::.....:....:..:..--....-----...::......:...:....:........x.:.:.xx.xx.::..::.....x.:............-x.:......x....:..:x.x..::xx........ 67M4I83M7I10M2I58M2I4M5I67M1D35M 254/324 78.4% 344/94230402 0.0% 21/324 6.5% -595644 -93634758 +19943 chr4 + 190214555 13089068 13089067 13089593 526 ATTTTGGTTTGGATTTTGTGAATTT-ACCTGCCATTG----CTTCAGTACTGTAC-AATAAAATAATTAGAAATAGGGGGCTTCC-ACATGAAGTTCTTAAGGAT----TCTGGGTCTTCAGAGTTATGAAAAATGTCTTTTGGATCATAATCTAGACAATCTTTTCTGATTATTTATCTAAAACTAAAAGCAGGAAATGATTCATTTGATTTCTGCCAATCCTGGAGTGTTGCCACTTTCGGCTCAGGAAGAGCTGGCTTCCCTTGGCAGTCCTCACTTGTAGGATGATGAATGAAGTTCTATGTTTGGTGCTAGCTAAAATTTTATAGGGTCTAAAAAAGCAATTTATACATGCTTCAGGAGGTGGCTATATTTTTTTCTTTTTTAGATAGCT------------------CTTAGTCACAGTAGGGCACTCAACATACATATATCACATTGAGAGG----TCATTATACAGGAAG----------CTTGAAACTTTGCTCTGTGTGTTGATAAACATGTTCTTGGCTTCTACAAGCCTGATGTGTGCTCAGAATT---CGGCACATAGG chr4 - 94230402 13679677 13679676 13680226 80550177 80550176 80550726 550 ATTTTAAATTGGATTTTGATAGTTTGATCTGACTATATGCTCCTCAGGGCCTTGCCAGTCAAGTAATTAACAGGAAAACATTCCCCATTTAAAGTCTTTGTAGCTGTAGTCTTATTCCTT---GCTATGAAAAATTACATTTGGATCAGAATCTAGACAATCTTTTTTGATTATTTATCTAAAACTAAAAGCAGGAAATGATTCATTTGATTTCTGCCAATACTGGAGTGTTGCCACTTTTAGCTCAGGAAGAGTAGGCTTCCTTTGGCAGCCTTTGCTTGTGTGATGATGAATGAAGTTCTATGTTTAGTGCTAGCTAAAATTTTATGGAGTCTAAAAAAGAAATCTAAACATGTTATAGGGAGTGGACAAG--------TTTTTTAGATAACTATACCATAAGTTTTCATGCTGTGTCACAGCAATACCTTCAATATATACATA-------GAGGAGGGATTCTTTCCAAAAAAAGATCTTAAATACTTGAAAATGCACTACTTGTCATAATAAGCA----CATAATTCCCCCAAAGTGAGTGTGCACTCACAGTTACACTGCATATAGG .....::x..........xx.:...-.:...x.xx.:----.:....x:.:x.:.-.:.x..:......:x.:x.:::x::.:..-.:x.:....::..:x:.x.----...x:x..:.:---.:..........xx.x.........x.................:......................................................x..................::............:x.......:.......:.:.::.....:x........................:...................:.:...........x...:..x.....:.x:...::....x:.x:--------...........:..------------------..xx.......:.:x:.x:....:...:.:...-------...::.----..x..x:.x.::...----------.......x.x::..x:x...xx.:....:..----.x.:::.:.:x...:x:x::....::....x.:..---.x...:..... 25M1I11M4I14M1I29M1I19M4I11M3D250M8D14M18I33M7D6M4I15M10I31M4D35M3I11M 376/504 74.6% 550/94230402 0.0% 68/504 13.5% -590609 -93639793 +3254 chr4 + 190214555 13097769 13097768 13097850 82 CTGCAGCCTTGACCTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGAGATATAAGTGTCTACCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.....:x:.x..:.....:.....::x.:.x.xx:x........::............:x..:.x...-----...... 71M5D6M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% -5099357 -89131045 +3429 chr4 + 190214555 13114276 13114275 13114323 48 TGTGTGTGTGTATATATGCATATACATATATATGTATGTATATACACA chr4 - 94230402 66471242 66471241 66471289 27759114 27759113 27759161 48 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATA ......:.......:...........:....:...x....x.....:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -53356966 -40873436 +14339 chr4 + 190214555 13120293 13120292 13120580 288 TCTTCTTCCAAAAATACTACTTAATTCAATGTACCTATTCTCCAGGTTCTCAAACATGGGGACTTCTTGTAACTTCGCAAAGAGAAGGCAGTTGTTTGCCTGGTCCAAGGTGTACACTGACTCTTTCATGCAAATACATCTTTCTACCCCTGTGGCCAAGTACCTTGCTGTTATTGCCACATGTTTATTCAAGTGGTGAGGAAATATTAAATATCACACATTCTCAGCAGAGACTGGACAGTAATTATCAACAGATGGC-AGCAGTAGGGGACTGAGAGAGCAAAAGAG chr4 - 94230402 13690721 13690720 13691005 80539398 80539397 80539682 285 TTTTTTCCCAGAGACACTGTGCAACTCACTGAGTGTATTTTCCAAGT---CAAGAACTCAGATTTATTTTAATCACAAATTGAAAATGATGTTGTTTTCAAAAACCAAGGTGTGCACTGATTCTTTCATGCTAG-ATGCCTTTCTACTCCTGTGGTCAAGTACCTTGCAGTTATTATCGCTTATTTGTTCAAGTGGTGAGGAAATATTAAATATCACAAGTTCTCAGCAGAGACTGGACAATAATTATCAACAGATGGCTGGCAGGAGGGTATTgagagagagagagag .:..:.:...:.:.:...::x:..:...x..x::x....:....:..---...:x.:xx:..:..x..x...::x.:x.xx..:..x.xx.......x.xx::x.........:......:..........x.:-.:::........:.......:............x......::.:.x.:...:...............................x:....................:..................-:....x....x.:........x:.:.... 47M3D84M1D124M1I29M 214/284 75.4% 285/94230402 0.0% 5/284 1.8% -570428 -93659974 +9108 chr4 + 190214555 13125052 13125051 13125666 615 AATCACCCATTTTACACCAGCAAATAAACACTCAAATGA-----CATGTTTTTCTACT--AAAAACTCATGG-GTCTTAAATTTCTTTTTAATCACAGGCTTTAGTATTATTACACGTGTTCCATTAACAGGC-ATATCCAATGAATTCCCTTTCATAAACACTAGTAAGTTCAGTGCAAACCAGCCAGGTGATTAATTTATAATTCTTGACACATT----AGGGAGGTGGGCTGGAGGTAAGAAACAGCAAGTAAGTCCTAGGATGGACTGCTTTTCACGCCAACACCACGGACACACACGGAGAAAGGCACACGCAAACACCTGAGCACATGGACACACACACATAAACACACCACCCATGAACACCCACTGTGCTGACTTGGCATTGGATCCAAATTTGACAAA-CCAATGCCTGAAGGCACATAGCCGAGCCTAAACTGTTGCAGGTTCCTTTTCCCATAAAAATAATAATAACGAATGAAAATATTTGGAACATGGCCAGAGCCTAATGCAACACAATTTCTAAATTCAGTATCCTCCTTCCCCCACACACATACTCCCCATTTGCGCCACCACCTCCTTCTTGCCTTTCTATGCAGGC----TGCTTATCCTACCTCGAATAAAAAG chr4 - 94230402 13693467 13693466 13694027 80536376 80536375 80536936 561 AATCAGTACTTTCACCCTAGCTGATC--TAATAAAATGAGTTTTCATATTTTCATTTTTAAAAAATTCATTCCATTTTAAAACGTTCTTTAATCACTTAGCGTGATATTTTTACACGTGTTTCAATAAAAAGTTCTATCTAATGAATTCCCTTCTCAAAACACTAGTAAGTTTGGAAGTTGAAGGTCATATGGTTAAATAA-AAGGCTTGTTGCACTGACCAGGGAG------CAAATGTGAGCAGTAGCAGATAAA----------AGCTGC-----------ACATTCTGGAC---------------CTTATGTAAGCACCC-------TGCACACATACACGCACACTCAC-ACCCTCAAACA---------------TGGATTTGGACTAGAACTGGACAAAATCCCTGCCTGAGGCAAACCAGCCAGTCCTGGAAGGCTG----TTCCCTTTCACATAAAAATAGTAATAATGAATAAAAATATTTGGAAGGCCTCCAATGCCTCATACAGCATAATTTCTGTTTCTCTTCCCCATGTGTACCCACAGGCTAGCTCCCACTTCTATGGTCCTTGTTCTCCCTGGTTTCTCACCAAGGTAATATATTTGCACCACCGTGAATGAAAAG .....x:xx...:..x.:...x:..x--:.x.x......-----...:....:x.x:.--.....:....xx-:.:.....x:x:.:.........xx:x:x.::....x...........:..x...x.:.:-x....:.............::xx...............::.x:xxx:xx:.:..x:..:....x.x.-..xx....x::..:.----......------:::.x..:..x.::....::...:----------::....-----------...::x:....---------------.x:.:.:..:....:-------..x.....:....::.x..x...-....x::....---------------...xx.....::x:..:.x......-:.xx.......:.xx.xx:....::x...::.xx.:..----....:....x..........:......:....:.............x::xx...:x....x..:..:..:.......:xx.::xx.x:..x:x.x:x......x:.xx:.....xx..:xxxxxx..x:x.:..:.:..x:..:::.:xx...:----.::..::x.:...x:....:..... 26M2D11M5I14M2I12M1I60M1I67M1D15M4I6M6D24M10D6M11D11M15D15M7D23M1D11M15D25M1I38M4D154M4I25M 346/543 63.7% 561/94230402 0.0% 90/543 16.6% -568415 -93661987 +3051 chr4 + 190214555 13142253 13142252 13142301 49 GGGAGGGAGGGAGAGAGGGAGAGAGGGAG-------GGGAGAAGGGAGGGAGGAGA chr4 - 94230402 17078265 17078264 17078320 77152083 77152082 77152138 56 GGGGGGGAGGGGGAGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAGA ...:.......:.....:.......:...-------.....:..:.....x:.... 29M7I20M 41/49 83.7% 56/94230402 0.0% 7/49 14.3% -3936012 -90294390 +36356 chr4 + 190214555 13142789 13142788 13143993 1205 TGTTTGAAAAGAAAGAGCTCTTTGTCACCAGGGTTGCACCATGGACGTAATCTCATTTTCAGCTAATCAATTCATATACAGTAAAAAGCCTAATGTGATTCCTCATTAGCCAAGGGCTATAAAGAAGCTGGTTCCGAG-----------GC-TGCAT-TAAATCCCAAAATGGCTGGCACCTTCCGCTCAGCGATTATCAAATTGGCTGGCATTAATCATTTTTAATGGCCAATCTGTGTTGTTTTTTTTTTATTTTAAAAAGAAAAAAAAAAAAAGGTGGGCATGTGGGGGAGGAAAGAGAGCCTCATCTGATTACTGGTGTAAAAGAAAACAAGCAGGTTTAGTA-AAATCTCATTTAAAAAAAAAAGTGAGAGTTAAGAGAAAGGCAAAAATTTTAAAAAGCCTGAATCACTTTTGTCAGGTATTTAGCTGTGACCAGCAAAACAGACCATCAAGAGGG-GGCCTTTCAGCAGAGGTCTGCAGTTGGGGGACCATCAATGGCCCCTTTATTTGTGAAAGATGGATTATTTTAAATAAATTACAGAGCACTTTCGCTGAATAAACAGCGCCTCGGTGGCTGTGGGGCGCTGCACACGCTTAATTGCACCACAGAAAATCCTAAATGACTCTTGAGCTGGGGGCTGGCCTTTGATTTCGCTGATAGGACCTGAGTCTTCAGGC-CGGCCTGGACAGTTTCTGGCTGAAAGGCAATGC-ATGGAGAGGAAAACAGCGAGCTTAATCGGGAATATATACTTTCAATATTTCGGAAAACCGCAGTGATGGAGGATTCCCAAAACTG--CACAAGGCTGCCTCAGAAGTGAGCCATCTGCGTGTCATTTTTATTTGCGTTTGATATGTTAAATGCCCTCAATGTTTATGGCGTGGAGGCCCACTCAAACACTGCAA--------AGATTCCTCAGCCAAAGCAAGAGGATATTCCTTCCCCTCCCTTCCCTGCACACTCATTTCTCCCAATACACACACACGTGCACATCTCCCCCCCCTAGAAATCCTCTCACTGTCCTTTTTCTGGACATAAAGTCTACCATGAGAATTGCACCTAAATCGAGATTTTTAGATGCCTTTTTAAAAGTTACAGCACAATCTGACCTTGTTTTAGAAACACGTTAAAGTGATTTATTAT--GTGCTGACCAGGAGTGACTACAGGCGGGAGTCAAGC--TAAGGCTGGAAGCAGGAAAGGGCATTTGAAACCTTCCCGA chr4 - 94230402 13695841 13695840 13696879 80533524 80533523 80534562 1039 TGTTGGAAAAGAAAAGATCTTTTGTCACTGGCGTTTGACCTT-----TAATCTAATTTTCATTGCAT------GTATACAGTAACAGGTCTAACATAATT-------AGCAAAGTGTCATAAAGACACAATGCCCGAGCAGTTTGAAACGCGTGCATGCACATGCAGAGCTGGCAGTCACAATCCGTT-----ATTATCACAGTGAATAGCATTAATCATTTTTAATGGTCAGACTGT------------------TAAAAAGAA-------------------------------------GTTCTAACTGATTACTGGTGTAAAAGAAAATAAACTTCATGCATACAAATCTTATTTCTAAAAAA--------------------------------------CTGAATCACTTTTGTCAGGTATTTAACTTAAACCAGCAAAACAGACCATCAAGAAGGCAGCATTTAAATGGATGCCTGCAGC-GATGGCCAGTCAATGGCCTCTTTATTTGTTAAAGATGGATTATTTTAAATAAATTACAGAGCACTTTCACTGAATAAACAGAGTCTCAGTGGCTGTGGCATGCTATACATGCTTAATTGAGCCACAG-AAATCCTAAATGACTACTGAGCTGTGTAATCGCCTTTGATTTTGCTGATAGGACCTGATTCTTTAGGCAAAAACCAAGCCATTGAGGGCTGAAAAGCAACCCTACCTTGAGGAAAATAGAAAGTTTAATCTGGAATATATACTTATAATATTTCGG-AAACCACAGGGATGGAGTGTTCCAATAACTGAACACAAGGCAGCTTCAGAAGTGAACGATCTGCGTGTCATTTTTATTTGAGCTTGATATGTTAAATGTCCCAAATGTTTATGTTGTATAAGCCCACTTAAACATTGCAAAGTGCAACAGATTCATTGGCAAAATAAAAAGTATAG--CTTTCTCAATCTTGCTTGC-------TGTCTTTCTGCATTGATACA---GCACAT--------------AATGCGCACAC-----------------------------------ATGTACCCA----GGGGTTTT-------CTT-----AAGTAATGGTGTAATTCGACCGCTTTTGGGGAACCTGTTAATGTGATTTATTTTGAGTGTTACCTATGGAT-ACTATAGGCTGAAGTAAAACATTAGGTCAGAAAATGGGAAAAGATATTTTAACCCTTTCTGA ....x.........::::::........::.x...xx...x.-----......x.......x:xx..------:..........x.:.:....::.:...-------...x...x.::.......x:.x:xx:.....-----------..-.....-:.x..x.x:.:x....x.x...xx....:.-----.......x.x..:x.:....................:..:x....------------------.........-------------------------------------.::::.x.......................:..:.xxxx.xx:..-......:....xx......--------------------------------------.........................:..xx:.......................:..-:..x...x.:::..x.:......:-.:x..x.x:.........:..........x......................................:............x.:...:..........x::...::...:.........x:......-...............x:.......x.x:x.x...........:...............x....:....-x::x.::::.x:..xxx........:....:x.-.:xxx........:..x:..:......x.............x:..........-.....:...x.......x:....x.x.....--........x..:..........:.x......................x.:...............:..:x..........x:..:x.:.......:.....:.....--------......x.::..x...xx..:..x...x--...:.:.xx:...x.:...-------.x...::.x::.:xx.:...---......--------------...x.x.x...-----------------------------------x..:...:.----.:.:....-------...-----....x.::.:::...::....x:x...x:.:...x:.....x..........x.--...:.:x.:.x.::.-....:....x.:...x..:.--..:.x.x.:..:::.....:.::....x..x....:.:.. 42M5D20M6D27M7D31M11I2M1I5M1I30M5D45M18D9M37D45M1I19M38D57M1I24M1D127M1D68M1I33M1I53M1D31M2I107M8I28M2D19M7D20M3D6M14D11M35D9M4D8M7D3M5D54M2I15M1D20M2I40M 765/1008 75.9% 1039/94230402 0.0% 228/1008 22.6% -553052 -93677350 +3041 chr4 + 190214555 13147747 13147746 13147800 54 ACACACATATATACATATATACACACATATATTTATATATTTGTATACATGTAT chr4 - 94230402 71630132 71630131 71630185 22600218 22600217 22600271 54 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGT ..x:..:.::..:......:.......x....x:....x.......:.....:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -58482385 -35748017 +3510 chr4 + 190214555 13156870 13156869 13156988 119 ATATACATATACATATATGTACATATACATATACATATATACATATACATATATACATATACGTATGTGTGCATATACATATATACATATACGTATATGTGCATATACATATACATATA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGC--AGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..:.:..:.:.:x.::...:...:.:..:.x.:.::.:.:....::.x..::.....::..x:.:.......--.x...:x.:::..:.:...x..::....x:..:x::.:..x.::. 72M2D45M 68/117 58.1% 117/94230402 0.0% 2/117 1.7% -75859212 -18371190 +3348 chr4 + 190214555 13156873 13156872 13156949 77 TACATATACATATATGTACATATACATATACATATATACATATACATATATACATATACGTATGTGTGCATATACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT .....:x.:...x::......:..::........:::.....:xx.....x..x....:..:...x.::...xx... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -39324363 -54906039 +3487 chr4 + 190214555 13156925 13156924 13157026 102 CATATACGTATGTGTGCATATACATATATACATATACGTATATGTGCAT--ATACATATACATATATACATATATAGTAGTCATTGCTAAACAATGTAAACAAC chr4 - 94230402 8395787 8395786 8395885 85834518 85834517 85834616 99 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA-----ATGAATAAAAAACCCAAACTAC ...:.::.............x....:...x:.:...:....::x.:...--.....:.:...:.:.:...x.:.:.:-----..x:x....x..:x:....x.. 49M2I26M5D22M 67/97 69.1% 99/94230402 0.0% 7/97 7.2% 4761138 NA +5190 chr4 + 190214555 13161238 13161237 13161511 274 CATGTGTTTAAA-AGAAACATGATATCATTGGCTAGCTGAGACAAGACCCAACCGGGAAACAGGCTCCAGTATTAAAATTCTAGCACATACAGCTTTTGGAAAATAA-AAAATAGACACAGTGGGA---------------TAGAAAGACTCTATCTCAATGGATAAGGCTGGGAGAGAAATGATCT-----ATTGAGCCACAGCCGAGAAGGCAGCTGGAATAGAGGAGATCAAAACGGAAACAGTCACCAGAAA------------AAAGGGTTATTGGCCACCAAAGAGAGATGACTCTAAAGAG chr4 - 94230402 13698678 13698677 13698956 80531447 80531446 80531725 279 CATGTGTGTAAGGAGAAATATGATATAATTGGTTAACTGAGACTTACCTAAATCAGGAAACAGGCTCGAACATTAAAATTCTA--AGGTGTAGTTAATAGAAAAGACTGAATTGGACACAGGGGAAACAGCTATATGGGTGCGGAAGTATGCTAACTC-----------CAGGAAAATAAATGCTGTAGCTGATTGGACTGCTACAGAAAAAGCAGCTGACACTG-------------TGAAACAATCATAAGGAACTTACAGCCCCTCAGGGACTGGTGACAATCACA---AAATGATTCTGCAGAG .......x...:-.....:.......x.....:..:.......xx:x.:x..:.:............x.::............--.x:.::..:.xx.:.....x.x-:..x.:.......x..:.---------------::...:x.:x...x...-----------.x..:.:.x.....x.x.-----....::.::.x:.x..:..:.......:x.:x.-------------x......:...:x..:..------------x.:..::.:x..:.x.:..x.---.:....:...:x.... 12M1I70M2D22M1I18M15I17M11D18M5I33M13D18M12I21M3D16M 168/245 68.6% 279/94230402 0.0% 63/245 25.7% -537440 -93692962 +8858 chr4 + 190214555 13163001 13163000 13163215 215 AAGCTACAGGTAGGATCCTATTTCAACCATCCGTCATGCAAATAAGCCAATGCTGGCCACAGATCACGAACTGCTCACCAGTCGTTTCCTTAATGACTTGCTAAATTTCCTCCACATCT-TTCCAGAAAGTCACTCTCTGGAAGGCCCTGTGGCTCC--------AACCCCAGCCCACACTGATAGCACCAGGATTCCTGATCCAAAGCCAAATCCCAGTTCTC chr4 - 94230402 13700503 13700502 13700722 80529681 80529680 80529900 220 AGACTGCAGGTAGCATCCTGTTTCAACCTTCAGCAATGCAAATAAGCCAATGTTGGCAGTATATCATGAACTGCTCACCAGTCATTTCCTTAATGACTTGCTAATTTTCCTCCCCATATCCTCCACA---TGACATGCTGGAACTTCACATGCCAGCGCAACGGAGACTGCAGCCCGTGTCGATGGCCCTAGGATT-CTGATTTCATGCCAGCTCTGGTTTCTC .::..:.......x.....:........x..x.:x.................:....x::.x....:................:....................x........x...x.-:....x.---.x..x:x......xx:.x::..x.xx.--------:..:x......:::::...:..x.:......-.....::x.x....:x..:x:x..... 119M1I7M3D27M8I31M1D27M 156/211 73.9% 220/94230402 0.0% 13/211 6.2% -537502 -93692900 +15066 chr4 + 190214555 13174496 13174495 13175048 553 TTCTGCATTTTATTTCAGGATTCACTGTCATAACCATTCATTTCCCCCCACCAGCTAAGTTGCTGAAAAAGAAAACTGTGTTTCCAGGC----CAGTCCAGTCCTACAATTTAAAAGCTGGCAGGACCCGTCTTCCTTTTCCCCCCTGGGAGGATTAATTTGCTTCTTTTTTATTCTCAAAGTTTTATGATTCCAAATAAAGGATATAATGGTGCCATTGAGAGTTGGGAAAATGTGGAAGATAAATAGTCTATGTGGGAACTGCTTAAAATGAGAATTGAAGTT-TGGAGAAGGAGGTGGGAGAAGTGGAGACATTTTTTATCATGTGAGCTTGGCCTACTCATGATAAAGGAAATTTCCTCCTTCTAATGAGTCTTGCCTTTAAAGACTGAAGTGAGGGCGAATGGCTCCATTTGTGTCATAAATGTAAAGAAGCTGAAATCGT-ACTCCCAAGAATGCAATATGTTTAATTTTGAAGTTGGGGAAGCAGCCATTAAAATGTACGTTATTTCTGGGACCTACAACACGGAGTCTGGGC-TTTTAATCTTGAATTCATT chr4 - 94230402 13706009 13706008 13706537 80523866 80523865 80524394 529 TTTGGCATTTAATTCCAAGATCCTTCAGAACAGAAACTCATTTCCCT-----ATTTAAATCATGGAAAGAGAGAGGAAAATGTTTAAGCTTTGCAAAGCAATGCCACAATTCAAAATCAGGCAGTGCTAGTCTCCCTGTTTCCCAA-GGGAGGATTAATTTGCTTCATTTC-ATTCTTTGCTTTTTATTATTTCAATTGGAGGATATAAAAATGCTATTGAAAGTTT--------TGAAGGATAAACTCTATATGCGGTAACTGCTTAAAATAAGAATAAAATTTATGGA--------------AAGCATAGACATTTTT-ATCACATTTATGTGACCTATTAATGATAAAAGAAATTTCCTTCATCTAACGAGCTCTATCTTTATAAA-TGTAACAAGAGAGGATATTTTAATTCTTACCATAAATCTAATAAAGTTAAAATCTTAACTCCAAGGCACTTAACATGCTTGATTCTGTATTTAAAGGTAATGTTGCTAACCTTTACAATGTTTTTATTACCTACAACATGGAGATAAGATATTTCAATATTCATTTTATT ..:x......x...:..:...:.x:::xx.:.:xx.:.........:-----.x:...:.:::x....:...:.:xx:x:.x.::.:..----..:xx..:.x.:......:....x.x.....x:.:x....:...x..:...xx-...................x...:-.....:x:xx......x...:...x.::.........x::...:.....:....x--------..:.:......:xx.x....:..x.............:.....x:..x..-....--------------...::x..........-....::.xx::x..:....:.x........:..........:.x.....:...:::.::.....x.:.-..x.:::..:.x.:..:x:.:x...:x.::.......x...x:...:.:.....x.-.....x.:.x.:x:..:...:..:...:..x.x..:::.:x:xx.::::...xx.x...:x.:...:.:xx..........:....x:x:.::-...:...x..x.x..:... 47M5D37M4I53M1D24M1D55M8D50M1I4M14D16M1D68M1D56M1I93M1I19M 345/522 66.1% 529/94230402 0.0% 38/522 7.3% -531513 -93698889 +3377 chr4 + 190214555 13183968 13183967 13184072 105 TCTGTAATCACATGAGCAAATTCTTTCTAATAAATTTCTTTATATGTATACACACACACATACACATGCACACACACACACACACACACACACACACACACACAC chr4 - 94230402 8395757 8395756 8395861 85834542 85834541 85834646 105 TTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC .:....xx:...x:..x......:::xx:x:.x:.x.x.x.:.:..:...x...:::.:x....:...:.::.x:...:xx.:.................x.... 105M 65/105 61.9% 105/94230402 0.0% 0/105 0.0% 4788211 NA +22880 chr4 + 190214555 13205846 13205845 13206593 748 TAACTGAATAATTCATGTTTGCACCCAAAGCAATTAAATGGCCAAGTCCCACAGACATCCATCTATGCCTTAGACATGGGAATTTATATTAAATTTTTAGTA----TGCTTAGGATACATAATTCTAAAACTAAATAAGATTGAGCCAATGATGAAA---AGCATACCATTTTTTA---AAAGTCAAGTTTTGAATGTTTTTCTTAACAGAGCATTAGTGTGCCT--CTCTTATACATG---GCACTTAAACCATCTGCTCTATTTTTTCTTAAAGACATAACGAAAAG-AAGTCCAATCGTAATTGGCAGTAAGAAAAATTGCATTCCTCCTGCCCTTTGCTCAGGCATACAGCCATCGAAGTGTTATGCCATAAAATTTAATTTTTGAGTTTTGAATGATTTACAGTGGAACAGAACTTATAAATCAGAACAGTAACCATTACTATGAATAGAGATGTATGTTTTTCT-AAATGTCTAAATGAAATACTTTGAAACACACTAAAAGACCGGCACAGTTCCCCAAA-GGCTGCCATAATTGAAGTTAATCATGCTTATTTGGACAGAAGGACCCTTACTGACACCTACGCACCTCCCCCTTCTTAAAATGAAGTGATCAAATCGTCATCATCTTTTCTTATG-----AAAGTAGTTAATCATGGCAATATAT----------CAAACT--CTTGCAGCTCAGGTTCTAGCCTTGTCTGCTAAGTTTGCAAATCTTTTCTAATATCTTTGAATGTGTC-----TTTAATCAGATGCAATTCTTAAAAT chr4 - 94230402 13707448 13707447 13708197 80522206 80522205 80522955 750 TAAATAAATGATACATTTAACCATCCACAGCAATTAAAGTGC-ATGGCTTGAAACCAAAATTTTCTGGTTTAGATGCaaatatttgtat--aatttaaaaaaaaaataCTTAGGAGTTAAAGTTTTA----TAAACAACTTGAAAAAAATGATCAAAGCAAGTGTTTTATTTTTAATTTAAAGTCCA------------------AATAAAGAATAAGTATACTTTACCTTTCTCTATAAGCGTATCGCAGCCATCTGTTAAA---------AAAAAAAAAAAGAAAAGTAAGTTCAATAGTAATTGGCAGTA-TAAGAATCACATTCCTTCTGCCCTTTGCTCAGGCACGATGCCACATAAGTTTGATGCCATAAAATTTAATTTTTTCATTTTGAATGATTTACAGTGGAGCAGAACTTATAAATCAGAACAGTAACAGGGGTTATGAATAGGGATGTATGTTTTTCCAAAATGTCTAAATGAAATATTTTGAAACATGGTAAAAGAACTGCACAGTTCTCCACCTGGCAGCCATAATTGAAGTTAATAACACTTGTTTAGACATAAGGAAACTCTTTGACACCTAGACCATT---TTTTTTTTAAATAAAATGATCAAACAATCATCATCTAGTCTTAAGAAATCAAAGCAGTTAGGTCTGGCAGTATGTTATTTGAAGGCAGTCTTGCTTTCAGCTATGTTTCCAACTGTGCCTAATAATTTTGAAAATACGTACCCATTTCTTAGCACAATCCCCTATTTTAATAATATACAATATTGTAAAT ...x.:...:..x...x.xxx..:...x..........xx..-.x.x.:::x.:x..xxxx.:.x..x:.....::::::x....:...--.....xx.:x.----.:.......xx:.x.:..:..----....:..xx.x:.:xx......x...---..::.x::......x.---......x.------------------..:.:..x..x...:.:.:.--.::..x.x:..:---.:.::xx.:.......:.xx.---------...:.x.x..x......-....:....x.............-x..:...::.......:..................::xx....:xx....x.x.....................xx:.....................:..........................x:xx::.........:..............:-..................:.........::x.......x.x.........:...xx-...x..................x.::...:...:....x.....xx..:x:.........x:.xx:.---::..:..x....:..:........:x:.........xx.....x.-----....:.....:x:x.....:...:.----------..:x..--...x.....xx.x...:.:.:x..:..:x...x....x....x:x.x.:x..x....x.x.::xx:.-----......x.x..:....x:.xx.... 42M1D46M2D11M4I21M4D26M3I16M3I8M18D20M2I12M3I21M9D17M1I23M1D156M1I56M1I67M3D45M5I25M10I6M2I67M5I25M 512/710 72.1% 750/94230402 0.0% 78/710 11.0% -501602 -93728800 +13675 chr4 + 190214555 13209421 13209420 13210046 626 AGGGAGGCACCAGAGAGCTTCAAGGGCCAGAGGACCA-GATATAAATCCCATCCAGACTTCCTTTCCTAAACCCAGGAAATACCAGTCAATTTATATCTCATCATCTTAACCCTGCAGGTCTGGTTAATGGTTTGACCCATGTATTCTTTCCTTTTCCAAAATCTTGTCCCATTCCCTCTTAACTTGATTTACTCTACTTACTCCAGCTGCTGACTTTGGCAGGTTCT--CCAGCTCTCAACCGACCACTGCATGCAGGCATCATCCTGAATGCCTTCCACTGC--AGCAATGGTGCAATTGCTCTCAC---TACAAGCTCAAGAAAGTG--CCCACTCTCATAACTTGAGCTGGAAAAACACCTTCCCCCAGCCCCACCCCTTTTCACTTTCAA--CACCCAGGCACA-----------CTTTGGGGCGCAGCATGAAAGGCCAGGCTAAAAGGGACTTGTATTTTTACACCATATTTGAGTTAGCTGTTTTATCTGGACGT-GAACCTGAGCAGGGAAAGGAGGGGGGCAGAGAGGGGCTTTATGAACTCAAAACCAAAATAGACCATTTAAGCAGGACTTGAGTGAAGTCACCGAATGTGCTGTGGAAAATACTTTCAAGGCATTTTATAAATTTTGCACCCAAAAA chr4 - 94230402 13709520 13709519 13710114 80520289 80520288 80520883 595 AAGTAGGCACTCAGTAACACGAAAAGCCAGGGGATGATGATGTCA--TCCTTAAGGGCCTGCCCTTATAAACCCAGGAAATACCAATCAATTTATATCTCATCATCTTAACCCTGTACTTCTAGGTAATGGTTTTAACC-CATATTCCCTCCTTTTTCAAAATGTTGTCCTGTT-CCTCTTAACTTGATTTACTCTACTTATTTCAGCTGCTGACTTTGGCACTTTATTCCCAGCTCT-AACCAACCACAGTTTGAAGACATATCCCTGAGC-TGTTCCAGTGTGGAGTGGTGGGGAACTCATTCACATCTGCTCCAGCTCAGGTTGATAGCCCTACCCTTGTGAACCGGGTTAGGAA---------------------CATTTAACAGTCTCAGATCCCACAGGCACAGGTGCCCACACCTGCTAAGCCCAAAGCAGAAAACAAGGCTTAAGCATTATTGGTACTTTATTCAGTATTTGGCTTAGCTGTTTTATGTGGAAGCAAAACCTGTCAAAGGGAA------------AAACAGATTTTGCAACCTCACAAGCCAAACTGTTCACTGGCACGTGGC-TGAAGGAAGCCCTGCATTTTGTT-----------TCCCAAGGCTTTATACA----TTGCGCCCAAAAA .:.x......:x::x.:.x:x..::.....:...:x.-...:.x.--:..x.xx:.:.:.x.::.:x..................:.............................:.xx...:.x.........x.x..-::.....::.......:......x......::..-..........................:.:..................xx..x.--........-....:.....x.:x..x..:...xx:.....::-:x.....x..:--..:::...x.x.x.:::..x..:---:x.x......:.xx::.:--..:..:..::.:.x::.:.:.:.:..---------------------.x:..xx..x.:...:--.x.x........-----------..x:x::..x..:x::::..::.x.....x..:x:xxx...xxx:....:x.x:......:x.............x....x.:-:......xxx.:..:..------------.:.x:.::...:::.x....x..x.x...:x.x:..:.x:x:.:x.:.-...:x....:.x:xx.x.x..:.-----------.::......x..x..:.----....:........ 37M1I7M2D92M1D34M1D53M2I8M1D33M1D11M2I23M3I18M2I26M21D16M2I12M11I83M1I17M12D48M1D23M11D17M4D13M 383/571 67.1% 595/94230402 0.0% 79/571 13.8% -500099 -93730303 +25542 chr4 + 190214555 13218610 13218609 13219328 719 TTGTTTGAATACTATATTTGAATTAGAG-AGAAAGAATAAATGTAGC-------AAATGTTGAATTGGCTCGATTTTCTTTGGTTGTCTTTGTCTGCTGTGAGGGATGGAGAAAAGAAGGCGCATAAAACACAGGACAGATAAGAGACCTCTGATATCTCTGGGGAAGCCTGCGCTTATTTTCAAAGATTCTGTTGGGATTCAG--ACATGTGTAGGCCAGCCCAGTCTGAAACTCATGTTTCATGGAGTTGATTCCTTATGAACCATAAAA--GTTTTCACTTGTCCCCAGTGTTATTTGTAGAAATATGTATCAGAGAGATTAGAAAATGATTATATATTCT---TTTTACAAATGACCCCAATAAGCAGTCTGTTCTATTTCTCCATTAGGGCAGCGTATTGGGTTATGTTTCAAGTTCCTGCCAGTTGGGACTGCCTTCATGCAAAACTTTGCACAACTTTAGCTTTCAGCTGAAACACAGAAGGATCCATGTTGGTTCAGGAATCTGACTTAAACTTTTTATAAATTCAGTGTATTGAGTTCAGTTTGTCATATTTATTTATGAACCATTTTCTGACACCTTGTT--ACAATTAATCTACACCCCTAATTACAACTTGAATCCTGAGAG-AGAAGTCTAAACCATTTGGCCTGAGATGCCTGTGGCATACTCTGCTCTTTAATAAAGAAGCTCCATTTCTCAAGGCTCAGAGATGCCAAATTCCAAAACAAA chr4 - 94230402 13712202 13712201 13712921 80517482 80517481 80518201 720 TTACTTAATCAAAATATTTAAAATGTAGTAGTAGGAATAAACAGAACCAAACTGAAATGTTATGGTCTCTAAATTTTCTGTAGCTTTCTTTGTCTCTTATTTGAAA--AAAAAAAAAAAATGACTGTGGTACAATGCAGATGACAAAAACATGATGTCACTGGGGGAACATATGCTTATTTTTACAGATTCTGCTGGGAGTCCTCTGTATATGTAGAACTGCTCAAACTGAAACTCGAGTTTTGTCCAGTCGATTTCTTGTGAACCATAAAACAGATTTCGCTTGTCTCTGGTGTTATTTGTAGAAATACGTATCAGTGAGATCAGAAAGCTATTATACATTCTCTTTTTTAAACATG-TCCCAATAAGCAGTCTGTTATATTTCT--GGTAGTGCAGCATATTAAGTTACCTTTTAAGTTCCTGCCAGTTGGGAGCTCCTTCATTCAAAGGAGAACCCCGGTTTAGCTTCAGGCTAGAACTTAGCAATAATCATGTTGTTTTAAGGATCTAATTTAGACTTTCTGTAAATTCAAAGTGTTGAGTTAACCATGCTCTGTTTATTTGTAGAATATTTTCTGACACCTTGTTACACAATTAATCTACAACCTCACTTATAACCCCGGTCCTAAGAATAGAGGCCTGACGTACACAGCCCTTGTCACCTGTAACATAATGTATTCTTTCA---------CTCTTGTCCCA---CTTGTAGATACAAGTTTCCTGGACAAA ..::..:.x:.xx......:..x.:x..-..x.:.......::x.:.-------.......:x:x.xx..x:.......x.:.:.x.........x:.:.xx.::.--:.:....:..:::.xx.:x:::...:x:.....:.x.:.xx:x....:..x......:.:.x.::.........:.x........:.....x..xx--::..:.....:x.x..:..:x.........:x....::.xx...:....:...:............--.x....:......:.::..................:.......x.....:.....::x......:.....---.....x.x...-:..................x.......--:x...x.....:....::....:x...:...................x:x.......x....:xxxx:.x.x:x........:x:...::...x:..x.:x.x:.......x..:.:.:....:.:...:.....:.:........:x..:.......x.x:x..::x.:.......:.::.x:..................--..............x..::.x...:...::x::....:...:-...:.:..:.xx:.:x::...:xx.x::.....::....x.x.::.....x.---------::.x.x..:..---..::x....:.x.:x....x::..... 28M1I18M7I52M2D96M2I66M2I70M3I11M1D27M2D202M2I42M1I52M9D11M3D27M 486/702 69.2% 720/94230402 0.0% 35/702 5.0% -493592 -93736810 +3081 chr4 + 190214555 13227317 13227316 13227395 79 TTATGATCGTCTAAGTTAATTACATATATATATATATATATATATACACACACACACACACACATATATATATATATAT chr4 - 94230402 85546003 85546002 85546078 8684325 8684324 8684400 76 TTATGAGTTACTCATTTTGTCACA---GTAGCTATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ......x:xx..x.x..x:.:...---:..xx...x..................x.:.........x.xx.....:... 24M3D52M 57/76 75.0% 76/94230402 0.0% 3/76 3.9% -72318686 -21911716 +3288 chr4 + 190214555 13227327 13227326 13227417 91 CTAAGTTAATTACATATATATATATATATATATATACACACACACACACACACATATATATATATATATATATATATATATATCTCCTATT chr4 - 94230402 21129769 21129768 21129858 73100545 73100544 73100634 90 CTAGCTCAAATATCTGTAGTTATA-ATGTATTTATACACACACACACAGGTGCGCATGTACATAGATACAACTAGATACGTAACTCATATT ...:x.:..x..:x.:..xx....-..:...x................x:::.::..:..:...x...:.xx..x...::..x...x.... 24M1D66M 62/90 68.9% 90/94230402 0.0% 1/90 1.1% -7902442 -86327960 +3014 chr4 + 190214555 13227333 13227332 13227390 58 TAATTACATATATATATATATATATATATACACACACACACACACACATATATATATA chr4 - 94230402 8395813 8395812 8395870 85834533 85834532 85834590 58 TATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x........:...::x..:..xx...:...............x...:.x..:x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 4831520 NA +3178 chr4 + 190214555 13227341 13227340 13227447 107 TATATATATATATATATATATACACACACACACACACACATATATATATATATATATATATATATATATCTCCTATTGGTTC-----AGTCCTGTTAGAGAACCCTGATGAA chr4 - 94230402 12321707 12321706 12321818 81908585 81908584 81908696 112 TATTTGCGTATTTATGTACATACAAACACACACCCTCCCATATTATAATGTATGCATACATATATGCATCTAAAATTAGTGCTCAAAGATCAAATTACAGCACACTGAAAAA ...x.:::...x...:..:.....x........x.x.x.....xxxx..:...::...:......::....xxx...:..x.-----::..xx:...x..x..x....x:.. 82M5I25M 71/107 66.4% 112/94230402 0.0% 5/107 4.7% 905634 NA +3167 chr4 + 190214555 13227350 13227349 13227422 73 ATATATATATATACACACACACACACACACATATATAT------ATATATATATATATATATATATCTCCTATTGGTTC chr4 - 94230402 66904847 66904846 66904925 27325478 27325477 27325556 79 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTC ......:..::..........:.........:....x.------.x:.:....:.xx:...:::..:....x.::.:.. 38M6I35M 52/73 71.2% 79/94230402 0.0% 6/73 8.2% -53677497 -40552905 +3207 chr4 + 190214555 13232798 13232797 13232878 81 GCCTGGGTG-------GCAGAGTGAG-----------ACAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGGTAGGGAGGGAGGGAAGAAAGAAAGAAAAA chr4 - 94230402 17708387 17708386 17708485 76521918 76521917 76522016 99 GCCTAGGTGTGGATAAGCAGAGAGAGTGATAAGCAGAACAAAGGCAGGAAGAGAGAGACCAAGAACAAGTAAGGTAAGAAGGGGAGAAAGAAAGGACAA ....:....-------......x...-----------......:x..::.........xx:...:x...xx...x.:.:....:..........:.x.. 9M7I10M11I62M 62/81 76.5% 99/94230402 0.0% 18/81 22.2% -4475589 -89754813 +3264 chr4 + 190214555 13232803 13232802 13232879 77 GGTGGCAGAGTGAGACAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGGTAGGGAGGGAGGGAAGAAAGAAAGAAAAAG chr4 - 94230402 47816942 47816941 47817017 46413386 46413385 46413461 76 GGGGGCAGCATGGGACAGAGAAGGA-AAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAAAG ..x.....x:..:....:....:..-.:..:.x.:x:.:.:...x:..:...:...:...::.:.::...:...... 25M1D51M 51/76 67.1% 76/94230402 0.0% 1/76 1.3% -34584139 -59646263 +3049 chr4 + 190214555 13232923 13232922 13232993 71 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAG chr4 - 94230402 36858307 36858306 36858377 57372026 57372025 57372096 71 GAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -23625384 -70605018 +12035 chr4 + 190214555 13241350 13241349 13241675 326 CATGGATAATCACTTAAAACTAATTCCTCAATTGTGTCAGAGAGATAGCCCCCAAACATCTGGTTCAGATAATCCTCCCCTCACCCCAGCCTGAAACGTTCCACCGAATGTTGCAAAGAAAAAAATACAACCTGTGCATCATTGCAACTGGTTGGTGACCCAACTCTGCAGGCTGACACCTGGGAACAAATCCACACCGGGAAGGAAGATCTGATTTCAGTGTGTTCATTTC-CATGATTCAGGAATAAACTCTTCTCTCACCTCCAATATCCCCATAACCTTGAGAGAAGAATGTCACCCTGAAAACAGA--CATAAACCTTAAGGGA chr4 - 94230402 13721166 13721165 13721454 80508949 80508948 80509237 289 CATGGATAATCACTTATGACTAATTGCACACTTGTGTCAGGGAGATGGCTTTTCA-CATCTGGTTCAGATAATCCTGCAGTC--------CTGAAATGTTCCACCAAATGTTGCAAA----AAAATACAACCTGTGCAGTATAACAGCTGGTGGATGACCTGAGCCTGCAGACTGACACCTAATAACACATTTGCACCCTGCAAGAAGATCTTATTACACCATGGTCATTTTACATGGTGAAGGATTA----------TCATCTTCA-----------------GGATGAGAATTCCACCTTTAAAGCAGAGCTATAAAGGTTCAAGGA ................x:.......x.x..x.........:.....:..::::x.-....................x.xx..--------......:........:...........----.................x:..x:..:.....x.:.....::.x:......:.........::x....x..:::....xx.x.:........x...x..x::..x......:-....:.xx....x..----------...:..:..-----------------:..x:.....x:....:.x...:....--:.....xx..x.:... 55M1D26M8D27M4D111M1I15M10D9M17D27M2I16M 220/286 76.9% 289/94230402 0.0% 43/286 15.0% -479816 -93750586 +19552 chr4 + 190214555 13243428 13243427 13243947 520 CCTTAACTTTGGGGTTCTCT--------GGATGAAGATGCTGAAGGCATATTTGTAGTACATGGCAAAAAATTTTCCTATATTCTCCCATTAAGAGCATCAGTAAATTAGATTAGTGGTTTTGACATTTTTCTGCCTGCTTGTTGACCTAATCCTCTAAATAGAGCCTCTATATTCCTTTCT-CATGGCCCATCTCAGTGTTTATAAGGTGGTAGAAGTTGTGGGACTTACCTGTCGCTGGGCCAAGGTCA--GAAAGAGCAAAGCACAGCTTTATTAGACCTTGGAAAAGTTCCCAATAGGAGGCTCCTTCTCACATACATAGGTTGTAACTGGTAAAATATCCTG------TAGCAGCTTCTAACTCCACTGAAAAGGCAGACCACGGCCAGTAACCCTCACCTAATATATCAATGTAAATCTTATTTCTATCACCTTTTATTCCTTACTCCTTTCTGTGCCCAAGCTGTATGAG--GTCACTAGGAAATTGTTTGAGTTTCCTTCCCCCAGGATGGAGGAACTCACTTCACATTGC chr4 - 94230402 13725270 13725269 13725773 80504630 80504629 80505133 504 CCTTCAATTCTGGGTACTCTTGGTTGGTAGATTGGGTTGCTGGGGGAATATTTGCAGAGGAAGACAGAATTTTTTCCTATATGTTCCTGTTGAGACCTTCAATAAATTAAATCAGTGGTTTTGAAGTTTTTCTGCCTACTTGCTACCATAAGTCTCTAAATAGAGCCTCTATAGTTTTTTCTATATAACCCATCTTAGTGTTTATAAGGTGGTAGGAGTTGTGGAACTTACCTGCAGGCTTGCCAAGGTCAGTGTATGAGCATAGCTCTGCTTTATTAGACTTTGGATACATTCCCATTTGGAGGTTCATTTTCAAATGTATAAATCTCAGTTGGTAAAATACCATGACCTTCTAGCAACTTCTAA-------GCAAAA--AGTCTATG----------CTCACCTCATACATCAGCATAAATCTAAATCATATCACCTTTTATTCCCC-CTCCTT------CCACAGCTGGTCCAGCACTCAGTGGGAAACTG-CTGAGTTTCACATCTC------GGGGGAA--CACTTCGCTTTGC ....x.x..:x....x....--------:...x::.x.....::..x.......:..x:x.x.:..:..xx...........x:...::..:...x.x...:.......:..:...........x:...........:....:.:x.x...x:....................x.::.....-:..::.......:...................:........:.........:x.x:xx..........--.x.x.....x...x.x............:.....x.x:......x.x.....:..x..:...x..::...::.:x:.::..........:.x..------.....:.......-------.x...:--..x.:.:.----------.......x...:....:::.......x.x.:x................::-......------..xx.....xx:x..--x...x.:.....:..-:........x:x:.:.------..:....--......:.x.... 20M8I154M1I68M2I94M6I13M7D6M2D8M10D50M1D6M6D15M2I15M1D16M6D7M2D13M 367/485 75.7% 504/94230402 0.0% 54/485 11.1% -481842 -93748560 +3007 chr4 + 190214555 13247565 13247564 13247666 102 TCCCCTTTCCTCTCCTCTACTCCCCTTTTTCTGCTGACACTTCTCATCCTTTTTCCTTTCTTTCTTTTTCTTTCTTTCTTCTTTTCCTTCTTCTCCTCCTCC chr4 - 94230402 18988798 18988797 18988899 75241504 75241503 75241605 102 TCACTTGACCACTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACC ..x.:.xx..x..:.x:.:::..::x.x..:....xx.x..xx..x.x:.....:.......:............x...x:xx.....x:...::x..:x.. 102M 64/102 62.7% 102/94230402 0.0% 0/102 0.0% -5741233 -88489169 +3480 chr4 + 190214555 13247589 13247588 13247798 210 CTTTTTCTGCTGACACTTCTCATCCTTTTTCCTTTCTTTCT--------TTTTCTTTCTTTCTTCTTTTCCTTCTTCTCCTCCTCCTGTTTCTTCTTTTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTTTTCTTCTTCTTCTTTTTCTTCTTTCTTCTTCTTCTCCCTCTTCTCCATCTTCTTTC-TCCTTCTACTTCTCATTCTTCTTCTTCTTCTC chr4 - 94230402 34857648 34857647 34857853 59372550 59372549 59372755 206 CTTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTT--------TATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCC-----CCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCTCCC .......:x..x.:xxxx:.:.:.....x.:x......:..--------...:....--------.x..x...x::..::.x:.x..:...:::.....x:.x....:......::.-----.:..x:::::..:x..x..x..x..x..:..:...:.x:.x:..x:.x:.:..x:.x..:..:.-....x:......:.x.:x:x:.x...::..:. 41M8I8M8D52M5D64M1I32M 118/197 59.9% 206/94230402 0.0% 22/197 11.2% -21610059 -72620343 +3323 chr4 + 190214555 13247806 13247805 13247912 107 TCCTCCCTCTCCTCCTCCTTCTTCTCCCTCTCCTCCTC--------CTC-CTCCTTCTTCTTCTTCTTCCTCCCTCTCTCCCCCTCTCTCTCCCCATCCTCCTCTTTGAAGACTCC chr4 - 94230402 92175643 92175642 92175758 2054645 2054644 2054760 116 TCGTCCCAGCACTGCCCTTTTTGTTCCCTGCCTTGCCCAGCGCAGCCTCGCTCCCTTTATGTCCTGATCCTCCCTCTCCCAGCTTCGTTCTCCTCATCCTCCTCTTTCAAGGCCTC ..x....xx:x..x.:.:..:.x:.....x:.:.x.:.--------...-....:.:.x:x..:.xx...........:.xx.:..x:.....:.............x...:.::. 38M8I3M1I66M 72/107 67.3% 116/94230402 0.0% 9/107 8.4% -78927837 -15302565 +8690 chr4 + 190214555 13250445 13250444 13250651 207 TAACTTAGATTCCTCAAGTGAGTAATTGCTGGATGCACCAGCTGACAGATGGGAAATCCTTGCACAGAGCTATGACAAGGGGAAGTCTGTGG----------------------------------GGAAAGGTGCTGTTATTTAG----CTAGCCCACCCCTGCTGAGTGAGTCCAAAGTTTCCCTTGGATTCATTCCCACCTGAACTTCCACCCTC--------ATGAGCTAAAAAGGCCTTTTACATGCA chr4 - 94230402 13728055 13728054 13728307 80502096 80502095 80502348 253 TAATTTACACTCCAGCCCTAAGTGATTACTGGATCAGCCAGCTGACATATGGGAAATATTTGCACAGAGCTGTGACACAGGGAAGTTTGTGGTTaaaaagaaaaagagagagagagagagaagaaaaaaaagGTGCTGTTAGTATGGAGACTGTGCCACTCCAGCTGAGTGAAGCCAAAGTTTCACTTGGAAGATTTCCCACCAGAACTTCCATCCTCTCAATGGTGTTAGCGAGAAAAGTCTTTTGCATTCA ...:...x.:...xxxxx.:...:...:......xx:..........x.........x:............:.....x:.......:.....----------------------------------::.............x.xx.----..:xx....:..x.........:x..........x......xxxx........x.........:....--------:.x...x.:...:.:.....:...x.. 92M34I20M4I68M8I27M 159/207 76.8% 253/94230402 0.0% 46/207 22.2% -477610 -93752792 +5745 chr4 + 190214555 13256709 13256708 13256918 210 CAAAAGG-----TCACTG-TGGCTTGGTGTAAGTTTATTTAATAAATATTTTTCTTGTTTGGAGGTTTTAATTTTAAGTATGTGGTCTACTCTTTTTGTATGATTATTTGCTCAAAAAAATTTTTAGTCAGCAACACACCTCATAAAAATTTA--ATATGTTTCAGAG------CTCTTTTTACTGTTTAAAAAAGCACAAATC-AGGCATTCTTGCATTTTGAA chr4 - 94230402 13733098 13733097 13733316 80497087 80497086 80497305 219 CAAAAGGGTGACTCACTGCTTGCATGTTG--AGTTTATTTAAGAAATGCTTGTCTTACTTGCAGGGTTACATTTTAAGTAGGTGGTCTCCCCTTTTTGAATGAATATTTGCTT---CCTTTTCTCAGGCAGCTACAGAGCTTATAAAATGTTAGGGTTTGTTTCCAAGTGTTGCCATTCCGCGCTGTTT-AAATAGCACAGTTCTAGAAACCAACACATTTTGAA .......-----......-.x..x..x..--...........x....::..x....::...x...x..xx..........x.......x.:.......x....x........:---xxxx..:.:..x....x...x.x..:......xx...--:.x......x:..------.x:.::x::......-...x......:x..-..:x.::xx::......... 7M5I6M1I10M2D82M3D37M2I13M6I15M1D14M1I20M 150/204 73.5% 219/94230402 0.0% 21/204 10.3% -476389 -93754013 +3028 chr4 + 190214555 13271265 13271264 13271364 100 TATGATACTTGTGGCTTTGGGTTTTTTTTTTATTTTGTTTTTTGTTTTTATTTTGTTTTTGTTTTGCTTAGGATTCCTTTAGCTATTCAGGCTCTTTGGT chr4 - 94230402 68915630 68915629 68915724 25314679 25314678 25314773 95 TATGTTGTTGGTTGGGCTGGGTTTTTTGTTT-----GTTTGTTGTTTGTTTTTTATATTTGTTTTAATTACTGTTAATTGAGGTATTTGAGTACTTTTGT ....x.::.x..x.xx:..........x...-----....x......x.x....:.x........:x...xx:..xx..x..x....:::.:x....x.. 31M5D64M 66/95 69.5% 95/94230402 0.0% 5/95 5.3% -55644365 -38586037 +12923 chr4 + 190214555 13295082 13295081 13295392 311 ACAGAGTTCACCCTGTTAAAAATCATTAATCATCTTGAGGTCA-CCAGGCCTGAACACATTTCCTTCTCAAAGGCTGTCCTGTGGGCGATCTGTCTCCTAACAGGTTTTGTAATGCTGAGTTGTAAAGTGTTCCTGATGAATTATTGTTGGCGCTCAGTCCAAAGGCTTGAAGTCTCAAGTCCATGAAAAGAAAAAGCAGACCCTCTCTCCTGCGCCTG--TTGTCCATGGGGCCAGCACAGGGCTTGCATTG--TGCATGA-GGGTGGATGGCCTGGAGGCCCCTCATCCCTGCAGCCCAGACTCCTGGAGGGGCC chr4 - 94230402 13745760 13745759 13746076 80484327 80484326 80484643 317 ACAGAGCTCAATGTGTTAAAAACCATTAATCATGTTGAGGTCAACCAGTGCTTTACATATTTCCTCCCCGAACTCTGTCTTGCGGGTGATCTGTGTCCTAACAGGTTTTGTATTGCTGAGTTGTAAAGCAGTCCTGATGAATTGTTTTTGGCACTCAGTCTAAAGCTTTGAAAGCCTGAGTCCTTGAAAATAAAAAGCAGAGCCTTCCTTTAACATTAGTCTTGGACACCACACTGGAACACAGTCTGCATTGTATGCATAACAGGAGAACAGCCTATGGCCTGCACATATTTTTGGCTGTGACATTGTGAGGAGTC ......:...x:x.........:..........x.........-....xx..xx...:.......:.:.:..xx.....:..:...:.......x.................x...............::x............:..x.....:.......:....x:.....:x.:::.....x......x..........x...::..::x:.:::x.--...xx..:x:x:.::.x...x:.::.......--.....:.-:..x.:.::....:x:.x.:x.x...x::.x::..:xx...x::xx....:.:. 43M1I175M2I32M2I7M1I54M 220/311 70.7% 317/94230402 0.0% 6/311 1.9% -450678 -93779724 +3231 chr4 + 190214555 13307091 13307090 13307195 105 AAGAAAGAACGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAAAATCAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 55334401 55334400 55334505 38895898 38895897 38896002 105 AAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAG ...:.:x...x.:.::.:..::..:.:.x.:x.x:x...............:x.x......:..:...:...x::::x..x.::....::.::::x..x:x.... 105M 62/105 59.0% 105/94230402 0.0% 0/105 0.0% -42027310 -52203092 +4151 chr4 + 190214555 13307120 13307119 13307234 115 AGGAAGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAAAATCAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGA chr4 - 94230402 30533168 30533167 30533284 63697119 63697118 63697235 117 AAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA .::.......:...:..:..:....:.......xx.x:.:....x...::::x...--.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.::::...:. 56M2I59M 74/115 64.3% 117/94230402 0.0% 2/115 1.7% -17226048 -77004354 +3136 chr4 + 190214555 13321134 13321133 13321182 49 TATGTGTGTGTGTATATACATATATATATATGTGTGTGTATATATATAT chr4 - 94230402 66471242 66471241 66471290 27759113 27759112 27759161 49 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT .:....:....:..:..:......:.:........x....x...:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -53150108 -41080294 +3079 chr4 + 190214555 13321146 13321145 13321206 61 TATATACATATATATATATGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704277 19704276 19704337 74526066 74526065 74526126 61 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x...........::...:.:.x...:...:.x:..:............x:.x.xx.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -6383131 -87847271 +3076 chr4 + 190214555 13321155 13321154 13321240 86 ATATATATATGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGATAGATAGATAGATAGATAGATAG chr4 - 94230402 81401293 81401292 81401378 12829025 12829024 12829110 86 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAG ....x.x.:...x.....x..x.x......:::.:x.x..:::...:x.............:..:xx:.x..:...:x.:.:.x.. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% -68080138 -26150264 +15132 chr4 + 190214555 13367913 13367912 13368684 772 ACAACGATACAGTAATAAAAATACAATATCAAATATTACTTTGTGAGTTACAAACTACAATATAAACAATTTAGGCCCTTTTTTAAAAAATGAAAAAATATTTCTATTACAGGCTTATTTCAAGCATT---TTCAGTTAGAAACAGCTTTATATACTTTTACTCACG-----ATAGCGAAAGAATGTCTTCATAAGTATCTGTAGGTAAAATATATTACT-TGCTTAATGTTT----GCA-------CTCTGAAGTATACTTTGACACATACAAGTTCCGAT-------------------AAGAGAATGAAATTGCTGTGGCAAAA--TCCTGGCTGATGATCAAGA--CTTGGAGAGTTTTCATATTAAGTTAAAAAAATTTACATCAATGAAAAAAGAAGCAAGGACATACAAAGAAACAA-CATCATTCTTTTGC---AATGAAGCAGTCTAATTCCAGGGAATG-GGTTTTCCATTTTGAATTCAAAGTGTGTGGTCCCAAAGTTGAATTCTT------TCAAATCCAAGGAG-------CTGCCTGCCACTGT--GAGGCAATAGCAATGATGAAGCAAGTTGGGAGTAAAGTGTTAACTGAACTACAGAGATGGTCACTGATAAAACAAGTTCCTAGAAGTCCTCGGGCCCAC-CCAGAGGTGAAGGGCAGCCAGAACTATCAACACAAA--AGAAAAATGCGCTCACTGAACTGCACACATAGAGCTTCTAGGAGGGTTAACAGTCCTTGACATAGGTTCCTGGTTGTAGTTTACAATATCTGCCTTCACCACCCTCTGTCATAAAAG--AAAACAGAGTTATTATCAGGAT chr4 - 94230402 13774425 13774424 13775207 80455196 80455195 80455978 783 ATACTGATGTGGGAATAAAAA--ATACACAAAACATTAGCTTTT---TTCAGAGCATCCATGAAGACAACTTGAGAC-----TTCAGAAGAGTAATTACTTTTATATTACAGCTTTATTTCAAGCACTGATTCTTCCTGGATACAA-TTTATACATTTTGCACTATGTATATACATTTATGGAATACTTTTCAAGTTATCCCTAAGTAAAATATATTAGTCTTCTCAAAGTATCCCAGCAATAGCTTCCCCAAATTACACTTTGCTGAATGCTACTTTAGATCACAGGAGAAAAAAAAAAAAAGGAAAAAGAAATGCTTTGGCAAAACTTCC------ATAATCACACTTCTTCATTCATTTTCATTCCAG--------------TATCAGT-----------CAAATAGATAGGAGAAAACAAACACAGTTCTACTGCTTTACTGAAACA---TAATTTAAAAGAATGTAGATTTTTATTTT---TTCAAAGTGTGTGGTCTTAACATTTCATTTTCAGCCAGTCAAAAAAAAAAAAAAAAAAACTGCCTGCTGCTTCTCAATGTAA----AATGGTGCAACACGTTTTTG--AGACTTGTAATTGCATTGTAGCGATGGTGACTGTTAAAA---GCTCCTGGCAATCCCAGAGCCTGTGTCAAAGTAGGAGGACAGCCAAAAGTATCAAAACAGAGAAGAATAATACAGTCATTGAACTGCACACATTGAGCTTCTAGGAGGATTAACGCTTCTCGTCACAGGCTCCTGACTGTAGTTGACAATATCTGCTTTCACCACCCTCTGTCATAAAAGAAAAAACACAGCAATAATCAGAAT .:.x:...:::.x........--xx.:.:x...:....x:..x.---..xx:.:.xx.x..:x.:....:..::.x.-----..x.:..:x.x..xx.:x...x........x:............:.---.::xx:.:..x...:-......:.:...xxx::.:.-----.:.x:x.x:....:::..:xx.:x....:x..:.............x.-.x..:..x..x.----...-------.:.::..x..:......x::x..:.x.x..:x...-------------------...::..x::..x....x........--...------..:....x:x--...x:xxx:.......x::.:--------------:....:.-----------...:x.x...x:.::......-..:x:....x:...---.x....:..---.....:x.::.....-:.x...::.....---................::..x:..xx...:.:------.....xxx..::.:-------........::..x:--:.x.:..----....:..x.:..x...xxx:--.:.x.xx...:..x.:.::..x......x....x.....---.:....:.x.:...:x.:...:::-:..:..xx.:...:......:..x......x...:.--....x...:.:x...:..............x..............:.....:x.:..:.x..:...:.....::.......x...........:.......................--......x..:x..x.....:.. 21M2D21M3D30M5D46M3I15M1D20M5I48M1I12M4I3M7I35M19I26M2I3M6D10M2I21M14D7M11D21M1I14M3I9M3D15M1I13M3D32M6I14M7I14M2I7M4D20M2D39M3D24M1I36M2I117M2I22M 491/715 68.7% 783/94230402 0.0% 125/715 17.5% -406512 -93823890 +8332 chr4 + 190214555 13369851 13369850 13370106 256 AATAATTTATCACTTAATACCTGCACTACTGTACTGAACAGATTCTACTCTGA------GTAGAGGTGGTATGTTGATTTTCTTCTTCCGGGTACTTCACTATTTCTGCCCTGACAATACGCTG-TCAATTCCATA-CAACATA-------------AATGAGACAAAGAAAAAAGAATTAAAAAAAAAAAGACAAAATGGAAAGTATGTTCAATGACTGAATATAGAAGGAAACACCAAAGTAGAAAAATAAAATTAACATATAAATGTAAACATG chr4 - 94230402 13776088 13776087 13776353 80454050 80454049 80454315 266 AAGAACTTCTACATCAATACCTGAACTACTGCATTGAGCAGACTTTGCTCTGGCAGCTGGAAGTGTTGTGATGTTGGTTATCTTCTTCAGGGTAGTTCACTATTTCTGCCCTGACAACATGCTGTTCAATCATGTATCAACATAATGGGCAGAGATGaaggagaagaatgaaaaagaa-aaggaaagagaagaaaaAATGGAAAGATTGATCAGTAGTTGAA-----AAGGAAGAATGAATG-----ACATAAAATGACAGCGCAGAAGCTAACATG ..x..:..x.xxx.:........x.......:.:...:....:.:.:.....:------.x..x.x..xx......:..x........x.....x......................:.:....-.....:x::..-.......-------------..x....x:..x:........-x.::...:.:....x...........xx..x...:.:::....-----......:x.:x..x.-----.x.......x.xx::::.:.x.:x...... 53M6I65M1I11M1I7M13I21M1D43M5D15M5D30M 180/245 73.5% 266/94230402 0.0% 32/245 13.1% -406237 -93824165 +3284 chr4 + 190214555 13373933 13373932 13373999 67 GTGTATATATATGTATGTATGTATGTATGTGTGTGTGTGTATATATGTGTGTGTGTATATATATATA chr4 - 94230402 39267142 39267141 39267208 54963195 54963194 54963261 67 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA ..:..x..:.:......x::.:.:..:xx................x.....::.x.:...:x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -25893209 -68337193 +9738 chr4 + 190214555 13376497 13376496 13376715 219 TTGTAAGAAATTCATTAATTTTTTAAATATAA-----AGTTCAAGGTAATCACCTGTGACTGTTCTATTTCTGCTTTGTTTAATTTGATCCCAAGGATTTCAGCAGCAACTTTCTGAAAGCACAGGAAGACCTACATAACAAAAA---TGGGTTTAAATGATTTAAAAGAGGCATGCTTAAGTTATCTTCAAATAAACAGAATTTTCTTAAAAATGATAAACAGCAA chr4 - 94230402 13784376 13784375 13784601 80445802 80445801 80446027 226 TTGCTAAATACTAAATAAAATTTTAAGCAAAACACGTATTTGTGGAAAATTACCTGTGATTGTTCCATTTCTGCTTTGTTTAATTTGATGCCAAGGATTTCAGCAGCAATTCTCTGAAAACACAGGAAGACCTATGGAAAAAAAAAATTGTATTTAAATGATTAAAAACAGACATCCTACAGGTTCTTTCAAATATATCAAACCATTCTTGAACTG-TAAACAACAA ...:x.:.x.:.x.x...xx......::.x..-----.x..xx:.:x...:........:.....:.......................x...................:.:.......:..............::x..x.....---..x:...........x....x..:...x..xx..x.x::........x.:x:..::x.::.x:..x..-......:... 32M5I108M3I68M1D10M 164/218 75.2% 226/94230402 0.0% 9/218 4.1% -407879 -93822523 +32349 chr4 + 190214555 13381468 13381467 13382698 1231 ACAGTATTCATTATT-TTACTTACAGAGTCTCCTGTCTTGGCTGAGACAAAGTGGCTACTAAAACCATTTTCCTGGCAAAACCGTAAGTGTTTTTCAGGTTTTATTGTTCGCATATGCTCCAAATCAACTAGAAAGGTGTTAAAGAAAGAAAATAATTCAATATTAGAGTCTATCAAAACGTTTTTAACATGTTTAAATTTGACTTGCTTTCCAATATTATATTCCAGCTTCGACATCAGCTGTGCAACCTTGGACAATTTATTAAACCTCTTTATGACTCAGTTTCCACATCTATAAACTGGGAATAATAAATATACCTATTTTGTAGAGAGTTATTTGATAATTAATCTATGTATAATGCACAAAGACCAGCACA------GAAGTGCT--------------AAAAAAAAAATGTGCGCTATCATTATTATTATCATCTGTATAAGTTCAGGCACACTGATGATGCTCAACAAAGATCTACTTAATATAGTACATTTAAAC------------------ATGGTGATTAATTGAAGGCAAGTTGTACTTACCCAAGCATATTTGGC---------TTGAAAGAGTTT---AATTACTTTAATAATTAGCTCTGTAATCTCTATAAGCTTGAATGTTAGCACAAATACATAACTTTCTGCTTAAGAGATCAATATTACATTGTGTGTTTACATTAATTTATAGCCATACTTTAATTTCACAAAGACATAGTTCAGTTGTTTTCCATCTAGAGTAT-------CCATTTTGAG---AGTAAGGGGC---AAGGATGTATTTCCTTAAATAGTTGTAGGTGCTTTAAAGCAAGGCACAGTACTCATATCCAATACTGGTTTTATCCAGCACAGTGTA-TTTTTCCAAATGTGATCCTT----------------TATTTAACAGTTTCTCTTTTTACAACACTACAGACCCTATAAGGGTGTTGATTCAATGCCGTCAAATTATAAGGCAAATATATTCA-CAGGATTTAAGGACAACTAGGCTCTTTGAGTCAATATAGGAAAAAAAAAACTTAAACTGATTTCCTGAGGAAGGGACCCAAATGACTTGTAAAAACTTGTAAATTTGCAAATCTAGTAAGCCTACATAATAGTGCCAATTGATTATCAACT--AAAAAATGCACTCATACTACATAAAAGACTTTA-TTTAAAATTATATTGAAAGTCTTTAGTTTGTAGGCTCAAGGGTTCTCTCTCTAGGAGATTTTTTTTAATCTAATGGGGTATTCCTGAGCCCCATTTATATTGCTTACCTTGGAAAATATGGAATTTTT chr4 - 94230402 13787180 13787179 13788391 80442012 80442011 80443223 1212 ACAGAGTTTATTTTTCTTACTTACAGAATCTCCTGTCTTGGCTGACACAAAATGGCTACTGAAATTGTTTTCCTGACAAAATCGCTGATGCTTGTCAACTTTCACTGTGCGCATATGCTCCAAGTCAACTAGAAACAAGTGAAAAAAAAGAGATTACT--ACAACAGAG-----------GCTTTTCATGTAGTTA-------TCTGTCTTAGAAAACT--------------------------CATTCATTGGAAATACATCAGATGTCAT-----CTTATTCTTTGCAG---------AGGTATGCTAATGCCGGTTTCTTTTTATAATCATATGTCAAAAATAAAGAAATCACAATGAACACTGCACAGTAAAACATAAGAAATTCTTATCTGATCTAAAGAAAAAAAAATTACGGACTCACACAAGCA-----ATTGGTAACAATTT--TCCCACTAACTACATGCAAAAAAAA---AAAGAATGTAAGACAATTAAATTGTTTTGTCTTTACAAGTATGATGTATAATGATAGTACAGCGTAAACTACAGACACAGAGTTCACAAAGTCCATTTGAAATAAGTTGTAAATAACTTTATTGCAGAGCACAGTAG--------AGCAAAAACTTCACTATAATAAAAAAATGAACTGAATAAAA----------ACATTG-ATGGTTA-GTTATTTTATATGAAGTCTTCAATTCCACG--------TTCCAGCACATTTTCATTTTTAGCATTTTATAACCACTGGAAGCAAAGTAAAGCTTTCAAATGGTATTTTATGTTAAAAAGCACTCGTTGCCT-ACAACACAACATGGAGCTCAGGTCTTGCACAGGTTTTATTGTGCACATTCCAGCTTTTCCAAATCTGATCCTAAGGTAACTGGAAACTATACTGAAAACTTTCTCTTTTTATTGCATTACAGTTCCTATAAGGGTGTTGACTCTCTGCCGTCAAATTATAAGGCAAATATATTCAGAAGGATTTAAGGACAACCAGGCTCTTTGAGTCAATACAGGAAAAAAAAA-CTTAAACTGATTTCCTGAGGAAGGGACCCAACTGACTTGTAAAAACTTGTAAATTTGCAAATCTAGTAAGCCTGCATAATAGTGTCATTTGATTATCAGCTGAAAAAAATGCTCTCATACTACATAAAAGGCTTTATTTTAAAATGATATTGGAGGTCTTTAATTTGTAGGCTCTGGAGAT-TTTCTCTTGGAGA---TTTTTAGTCTAACAAGGGATTCCTACACCCCATTTATACTGCTTACTTTGGTTAATGTGGAGTTTTT ....x:..:...x..-...........:.................x.....:........:...:::........:.....:..:x::..:..x...:x...:.:...x..............:...........x:x..x...:...::.:..x.:.--.:.x:....-----------.:....x.::.:x...-------::..::..xx..x.:.--------------------------..x:.x.x.:x...x:..:.:.:x..x.-----..:.x.:.:::..x---------:..x..:x...xxx::x:.x:...x..x.:xxx...x.x.x..x...xxx.xx:.:....x...xx.xx...:.x.------...:.x..--------------.........x.::.x:..xx..:x.x:.-----..:x...xx.:..:--x.x....:.:x.:::x...x...:.---.xxx...:..:x...x.....:------------------...:..xx....x:x..xxx..:xxx.x:...xx.x:..x.x..x:.---------......x.:x..---...x......x.:xxx...x.x...:--------...xx:..:x.:.x:.:..xx.x.x..:xxx...xx...:.----------......-:..x...-:...x......xxx.xx...:....:...:--------x.:...:xxx...:...:.xx..:..-------...:.xx:..---.....:.xx:---..x.:.:.x..x:x.....x..:xx.x.x...:.-.x.:..x::..::.x:....x:..:x::..x........:xx.....x.x:.-:..........x.......x----------------..:.x..x.x............:x:..:.....x:................:..xx..............................-x................:..................:............-...............................x.........................................:..........:..x..........:..--.........x.................:.....-........x......:.:.......:...........x:.:.x.-.:.....x.....---......:.....:::..x......:x:...........:.......:....xx...:....:..... 15M1I142M2D9M11D16M7D16M26D28M5D14M9D76M6I8M14I28M5D14M2D25M3D22M18I47M9I12M3I26M8D41M10D6M1D7M1D30M8D26M7I10M3I10M3I34M1D52M1I20M16I86M1I49M1D101M2I33M1I44M1D13M3D67M 808/1127 71.7% 1212/94230402 0.0% 189/1127 16.8% -405712 -93824690 +8302 chr4 + 190214555 13383002 13383001 13383244 243 TTTGTTTTGCTTTGTTTTGTTTTTTTTGCTCTTCTGGC-CAGAGTGCTATTCCTTAAACATCACTATCTCCTTATTTACAAGAACAGGCAAGGAAT-GTCCAGATACCACAGGCATCAATTTGTGGAAGACTAAAATACTAAGCTATTAGCACTGACATTTATATATCCAATTTATCATAATATTGGAGCTAACTTTTCTAATTCAACAAG----AGTAAGAACAAATCTTGTCACGAGGAAAAATCCC chr4 - 94230402 13788357 13788356 13788602 80441801 80441800 80442046 246 TTTATACTGCTTACTTTGGTTAATGTGGAGTTTTTGCCACATATTACTGTTCCTCGCACATCAGTAAGGCCTTGTTTATAAGAACAGGCCTAAAATCATCCAGTTACCACAGGCATTAATTTGTGAAGGACTAAAATACTAAGCTATTAACACTAACGTTTGTA-GTACAGTACTTCATCATATTAAATGTAGAATATACAGTTTTACAAAAAATAGGAAGAACAAACAT--TTATTAAGATAAATCCC ...:.x:.....xx...x...xx.x.x.xx:..:..x.-..x.x.:..:.....::x......x..xxx....:....:..........xx::...-:.....x............:........:.:.....................:....:..:...:..-:.x..:.x:x....x.....::.xx..:xx.x.x:.:..:x....:----..x.........:x.--.:.:x.:..x....... 38M1I57M1I67M1D46M4I15M2D17M 170/240 70.8% 246/94230402 0.0% 9/240 3.8% -405355 -93825047 +3103 chr4 + 190214555 13393845 13393844 13393915 71 TCACAGGCTACAAAAAAAAAAAAAAAAAAACAGTACATGCACTTCTTTAAAAGAAGTAAAACAATACTTCA chr4 - 94230402 67551092 67551091 67551162 26679241 26679240 26679311 71 TCATGACTTACAAAAAAAAAAAAAAAAAACCCATACATGCATTTAATCAAGAGTAAAACAGCAGAAATTCA ...:::x:.....................x.x:........:..xx.:..:..x.:x.x.:..:x.x.... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -54157247 -40073155 +7457 chr4 + 190214555 13395319 13395318 13395500 182 TACACAGTTATTTAAAAAGAACTTGCAGCTGTACATACAAGTTGTGAAACTTTATGTGAAATTACATAAAGTTTAAA-AATGATC---CATGATTAGCCCA----AACATAACAAGCAAAATTCCCTTAATAATTTATTAAATTTGATTCACATGTGGTTAAAATTATATATACACTTTGACTTCTAAAA chr4 - 94230402 13793613 13793612 13793788 80436615 80436614 80436790 176 TACAAATCTTTCTGCAAAGTATTTGCAGCTGTTCACACAAG------------GTATACAATTACATAATGTTTAAATAATGAGCTATCACGATTAGCCCACACAGACATGACAAGTAAAATGCT-TTAATAATTTATTAA-TTTGATTTACATGTGCTTAAAATTATGTACATATTTTCCCTTCTGAAA ....x.x:.x.:.:x....x.:..........x..:.....------------:.:.:x..........x.......-.....x.---..:..........----:....:.....:.....x.:-...............-.......:.......x..........:..:.:.:...xx.....:... 41M12D24M1I7M3I13M4I20M1D15M1D48M 136/168 81.0% 176/94230402 0.0% 22/168 13.1% -398294 -93832108 +22985 chr4 + 190214555 13396161 13396160 13396629 469 TCTAACTTAAAAGAAGTAAAAGCAAAATATAAATATAGCACTT-GTACAGATTT-CACAGTAATTTTT--AGGTTATCAGGGAAACATCTTGAGTGTTGATCTGGTTATACTCAATTCAAACAAACGACTTGTCACATTAACTACCTCCAGGAAGTTACTCCAAACACAAAATAAACTGTTTATGCCCCTACTCAGATAGATAACATGACAGATTGTTATTAGTTGAAGACAGATGAAATACATTAATTTGATTGTGAGCATGTGTTTAATTTTACCCTGCCATGTACACTCT-CTAATGCTGTCTTTCTATGATGACATAGT---AAAT--CATGCCATATTAGAAGAATTGCTAATGCAAGAAAATAAAAAATTAGCAGAACTTGATTTTGACTCTGTAGATTCTTAAACCAACCTTCTTATAAATATAACTGCCTGGAAAATCCACGTGTTCCACAAA-CAGATGAAGAAAAAAGTT chr4 - 94230402 13794772 13794771 13795238 80435165 80435164 80435631 467 TCTGATTTAAG-GAAGCTCAAGGAAAATATAAATATAGTTCCAAGTACAGATTTTCTCAGTAATTTTTTTAGGTTATCAAGAAAACATCTAGAGTGTTGATCTGGTTATGCTCATGTCAGACAAACTACATGTCACATTAACTACCTCCAGGAAGTTATTCCAAACACAAAATAAACTGTTTATGCCCCTTCTCAGATAGATAGCATGACAGATTGTTATTAGTTGAAGACAGATGAAATACATTAATTTGATTGCAAGCATGTGTTTACTTTCTCACTGTCATGTACACTCTGCTGCTGATGCTTCCCTATGAGGATGTAGTAACAAATCACATGTTATATTAGAAGACTTGCTAAGGGAGAATAATAATAGTT----GGTGCTGCACTTTAATACTTAAAACACTATACTTAACAT--TTCCAGTTCTAAC-----AGGAAATCGACG-GTTCCAGAAAGCAGAAAAAAAAAAAAGCT ...:.:....:-....:xx...x...............:x.:x-..........-.x...........--.........:.:........x..................:....xx...:......x..x............................:...............................x............:...................................................::............x...:x.x...:............-..:x..x..::.::......x..::....---....--....::...........x.......x.x.::.x.....x.:x.----:.x:..xx.:...:.:x..xx.:.:x..xx.x::...x.--..x:.:x.x....-----:.:.....x...-......x...-....x:..:.......:. 11M1D31M1I10M1I13M2I223M1I29M3I4M2I43M4D39M2D13M5D12M1D10M1I18M 371/456 81.4% 467/94230402 0.0% 24/456 5.3% -398611 -93831791 +3941 chr4 + 190214555 13403971 13403970 13404033 63 ATATTAAACTGTAATGTAACAAACTCTCAGAAGATGGTGCTAGTTCAATATGACAATAAGCCA chr4 - 94230402 13798614 13798613 13798676 80431727 80431726 80431789 63 ACATGAAGTTGTAATGTAGCAAACATTCAGAAGATGGTGCTAGTCCAATATATCTGCAAGCCA .:..x..::.........:.....x:..................:......:x.x::...... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% -394643 -93835759 +3300 chr4 + 190214555 13412622 13412621 13412715 94 AAAGTGAAGAATAATAATACAGGAAT------------------------CAGCACAGACTTTATACAAAGGCACAACAAGAAAACAAAAAGAATAAGAAAAAAACTAAAGACAAAGA chr4 - 94230402 10129446 10129445 10129563 84100840 84100839 84100957 118 AAAGTGAAGAAGGATAGTAAATGCACAAATGTTTTTAAGAGAGACGTAGACAGCATAGACTGTAAACAGAGGCATTGTAAAAAAAACAAGTAAACAAAAAAACAAATAAAGCCAAAGA ...........x:...:..x.x.x.:------------------------.....:.....x..x...:.....:x::..:....xx..:x:..:..:....x..x.....x...... 26M24I68M 68/94 72.3% 118/94230402 0.0% 24/94 25.5% 3283176 NA +3671 chr4 + 190214555 13433086 13433085 13433152 67 ACCCATAGGCTC-AAAGTAAAGGTATGGAGAAAGATCTATCATGCAAATGAAAGAAAAAAAAAAAAGA chr4 - 94230402 65751351 65751350 65751418 28478985 28478984 28479052 68 ACCCATAAGCACTGAAGTAAAGATGAGTAAAAAAATGTTTCATGCAAATGACAAAAAAAAAAAAAAGA .......:..x.-:........:.:x.x.:...:..x.x............x.:.............. 12M1I55M 54/67 80.6% 68/94230402 0.0% 1/67 1.5% -52318265 -41912137 +51359 chr4 + 190214555 13441433 13441432 13442443 1011 ACAGCAATTAATCTCTACCAT-----TCCTTAAATGATAAT----GACAATATATTTTCAAAGTAGCCACTGGTGACAATTCTGTAAATCAATGTGCTACAGTGATACCTAAATAAAAGCTTATTTCACTATAATGATGCTTCCAGGCTTCCCTCAAGTCAGGTGGTTACTTGCAGTTAATGATCTGTGACATACCACACAAGTAATCCTAAAAAGACTTATTATCCATTGCATGTGCAACAATATTTGCTTTATGGATGGCTAAATGAATGAAGACATTCAATGTAACTGTAAAAGTAAAATCAAAAGAAAACTTACAAGTAACATGTTTTCTTTAAGTAAAAGGGCTGTGACCATTTTCCATTAATACTTAACCTTTAGCTGGAGCAGTGCAACCAC--ATAACACCCAAATCCATAAAGCCCAAGAGCTGTTCTGGGTTAATGCTAATTAACTGCCCCCAATCAAAAGAGCAGTAACTTTCCAAAAAT---GTGAGCTCATCGTCCTCTATTGTTGACATCA------------GTCACATCACGAACTCAA----TGAACAGTAAAAAAGATAAATATGCTTTATACATAACTTGAGAGCACGTTT------------------------------------------------------------TAAAATCAAATTTATAAT--------------ACATATACCACACAAACT-------------CACCAAAAAAGAAC--TATGTTATACATAAAACAGGGTAATCTCAAATAGT-CA--ATCCTACATGGCTGCAAGACTTTGTAGGCATT--CACGTTCACCATTTACAATTTTATTTCATTTAGTAGACTCAGCTTTTGTCCACCATATGTCCACTGTGGATTAACTATTCCCTCAGGTACAATTAAGGACTTTCCATTTGTTGTAAGAAGAGCTAAGTATGAAGGACACAGCCAGAAATAACATTTGTACCTCAACCAAAAACAGAAGCACATTCAAACTCAAATGATGGTTTATGCAGCATCTTTTTTTTTTATTACACACGTGTCTGCATAGCAAAATAAACTTGAGATAAAAATTCATGGCAATAGCACAAGAGCTTTCACCATTCAGATTAGATATCA chr4 - 94230402 13809549 13809548 13810665 80419738 80419737 80420854 1117 ACATTGGTTATCCTCTATCATCAACTTCCTTTAATAATAATATATGAGAATATATTTCCACAGTAGCTAATGGAGACATTCCTACAAATCAATGTGCTGCAGTGATACAGAAATAAAAGCTCATTTCACTGTAATGATGCTTCCAGACTTCCCTTAAGTCAGGTGGTTACTTGCAGTTAATGATCTGTGACATACCACACAAGTAGTCCTAAAAAGACTTATTATCCACTGCATGTGCAACAATATTTGCTTTATGGATGGCTAAATGAATGAAGACATTCAATGTAACTGTAAAAGTAAAATCAAAAGAAAACTTACAAGTAACATGTTTTCTTTGAGTAAAAGAGCTGTGAACATTTTCCATTAATACTTAACCTTTTGCTGGAGCAGTGCAACCACATATAATGCTGGAATCCATAAAGCCCAAGAGCTGCTCAGGGTTAACACTGATTAACTGCCCCCAATCAGA--AGTTATAACTTTTAAAAATTTCAGAGAGCTT----CACTCCGTAAGTGAAATCAAATTGCACTTATATCATGTGGCAAAGGCAGAGATGGAACACTTGCAAAGA-AAAGAAATTCTGT-CCTGGCTTAAAAGCAGgtttgttgggtttttttttttttcatggtgatttttttgtttgtttgtttgtttTTCAATCCAGTAAAA-CAGATATTGAATTGTTGTTCAAAACCATGTATTTTATGCTGATTTCCATTTCCATAACAATAGAAAAGGATAGCAAATTA-ACTTAAAATAAGCTATAATCCAACAGCACAATATCTCCCATGACTCTCAGACTGTGCAGACATTCACACATTTTCTGTTTATAATTTT-TTTCATTTACTAGACTCAGC-TTTGTCCACCATATGTCCACTGTAGATTAACTATTCCCTTAGGTACAATTAAGGGCTTTCCATTTGTTGTAAGAAGACCTAAGTATGAAGGACGCAGCCAGAAAAAACATTTCTACCTAAACCAAAAACAGAAGCACATTCAGCCTGGACT-ATGGTTTATGCAGCATC----TTTTTTATTAGATGTGTGTCTACATCACTAAATAAACTACAGAC-AAGATTCATGGAAACAGCAAGAGATCTCTCAGCATTTCATTTGTGTATTA ...x:::...x:.....:...-----.....x...:.....----..x.........:..x......:.x...x....x.:..::.............:.........xx...........:........:...............:.......:..................................................:......................:...........................................................................................................:........:.......x.........................x...................--....::.:x:......................:..x.......::..:..................:.--..:x:.......:x....x.---.x.....:----:x...::.x:x...x....------------:...::.x:.:..xx..:----x.....x.x:x.....-...x.x::.:.:.-.x.::...:.:....x....------------------------------------------------------------.....-..:..x.xx...--------------.::...x::.::.x:.:.-------------..x:.:.....:.:--:.x:...-..x.....:.:.x..xxx..x..:..:-..--...::x....:..x:x.....x..:..:....--...:..:x.::....:......-.........x..........-.......................:...............:..............:......................x...............:..........x.......x.....x.......................:x..x:.x.-.................----..........x.:::......:...x:.x.........xx...:-..:........x..:....x:...x..:...x....:x:x..:x:...:. 21M5I15M4I354M2I68M2D20M3I8M4D19M12I18M4I16M1D13M1D20M60I5M1D12M14I18M13I14M2I7M1D27M1I2M2I32M2I22M1D20M1D151M1D17M4D44M1D50M 819/993 82.5% 1117/94230402 0.0% 142/993 14.3% -368116 -93862286 +22507 chr4 + 190214555 13449498 13449497 13449987 490 AACACAACTTATAGGGTACATTAAAACGTAACCTTTAAACTTTCCAATGTAAAA---CATCACTTCCTGGGCAGAGATAGTACTCCAAGAACTATCAATCACTGTTAAGAAGAATATACACTCAACATTCTTAATTAGTGTTGATGCACTCTTCTCTATGCCCTCATCTGTCATGAAGATTGTTTAAAAATCTGAGTTATTAGTCTTTATTTGCAAAAGGATCTGGTTAACATCTTTAAGAGTAGAAATCATTCATCCATCCACTCTGTACTGGAGCATGATAATTCCCACCCCCAATACAAGTTACCGATAACCACCACCCCTCCACTAACTAAGAAGCTATAAATCAGGAAGAGGGCAGCTTCTATGTAACCCCTGTTAA-TTCTGTTTATAATCTATCCAACTGAGAATGTTAGCTAGTCAGGAGAGAAACTAGCTGATGGATCAGATAGTATAAAGG------CATAACGGATTA---AAGATAGAAAATAACAAAATG chr4 - 94230402 13812928 13812927 13813416 80416987 80416986 80417475 489 AATGCAAGTTAAAGGGTACACTAAAACATAACCTTTAAACTTCACGATGTAACAGCATATCACTTCCTGTTCAGAGATATCAC--CAAGATCAATTAATCATGGCTAAGACGAACAAACGGTCAACATTCTTAATTAGCGCTGATGCATTCCCCTCTGTGCCCTCATCTGTCATGAAGACTGTTTAAAAATCTGTGTTATTAGTCTTTATTGAGGAGTGGATCTGGTTAATATCTCTAGGGATAGAAATCATTCATCCATCCACTATACACTGGTACCTGATAATTCCTAGCCCCCACATAAGCTCCAGATAACCTAAG-------ACCATCTAGGTAACTATAAATCAAAGTGAGTGTAGCTCCCATGCAACCTGGGTTAATTTTTGTTTACAATATATCC-ACTGAAAACGTTGGTAGGACACTTGAGGAGTCTGCTTATAGAT----TAGTGCAAAGGAAAATATATAAAGTAGTAGTCAAGGCAGACAGAAAAGAAATG ..::...x...x........:......:..............:x.:......x.---:...........xx........x:..--.....x.x..:.....:x.:.....x...:.x..:x.................:.:.......:..::....:.....................:..............x................x:x:.:x............:....:..:.::.......................x.::.....x:.x..........:.x....x.:.:...:.x.x.......xxx:-------..:.x...:.x.:..........:::x...x.:....:.:...:....:xx.....-..:......:...x.....-.....:..:...:.:x:.x..xxx...:.:::x...x..:...----....::.....------:....x.x.x..---...::...x.:x..x:..... 54M3I26M2D234M7D56M1I19M1D43M4D11M6I12M3I21M 363/476 76.3% 489/94230402 0.0% 27/476 5.7% -363430 -93866972 +4180 chr4 + 190214555 13471577 13471576 13471686 110 CTCCAGCCCCAAACTCCTGGACTCACGTGATCCTCCCATATCAGTCTCTCAAGTAGCCGGGACTACAGGTGCCTGCCACCATGACCTATCATCTATTTTTGACAATTCAT chr4 - 94230402 18197126 18197125 18197230 76033173 76033172 76033277 105 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG---TATCATCCTTTCATGACATTACAT ..x......x..:..:....::...x...x.:.x.xx:xx....:..:.........:..:......x....--:....::..---.......:x..:x.....x.x... 72M2D9M3D24M 76/105 72.4% 105/94230402 0.0% 5/105 4.8% -4725549 -89504853 +8369 chr4 + 190214555 13474295 13474294 13474419 125 AATAATCAGAATTCATATCATACCTGTGCTCCATAGATATATTTATCCAACATTTTGCCTCCTATTGTCTGCCCTCCTATATCCCAAATTTGAAGGGTAACATTCAAGTTTCCTAGAATATAAAA chr4 - 94230402 13825742 13825741 13825866 80404537 80404536 80404661 125 AATTATCACAATCAATACCATACCTGAGCTCCATAAATATATTTATCCAGCATCTTGCCTCCTATCGTTTGTCCCCCTACATCCCACACTTGAAGAGTAACATTCAAATTTCCTGAAAAAGAAAA ...x....x...:x...:........x........:.............:...:...........:..:..:..:....:......x.:......:...........:......::..x.x.... 125M 103/125 82.4% 125/94230402 0.0% 0/125 0.0% -351447 -93878955 +39568 chr4 + 190214555 13476743 13476742 13479532 2790 AAATCAAGAA-----TATATCTAATACAAAT---TTCTAACCAATAAAG--AACAT-TAAGGAAATTGTCAGAAATCTAATCCCA-AACA-CAAAATGCTGCAAAATTCCTGTTCCTCTGTAAGAAATGACATGTAACTAGGAGAAAAAATAAAATAAATGAGGTGACAAAACACAGGTA-----AGTTGCTTTTGGTATGAATTAAAGCCACCAAGAGGGTTCAACAGTGACCTTGTAAAAGTACACTTGGTGCCTTGGTTAACCTTACTTAAAGTGCTGCATAGTCAAGATGGAACTAAAAACACAAGTCTGCCCACTTCTTGTACTAAAGACTTAGAAA-TCTTTTTCACAGTAGAACGCTGTTTACTGGACTGTACCCACAAGCTTCCTGAAAGTATTTTGACTAAGGCTCTTAAGAAGCTCTATCAGCAGAATCTCTGACTAACAGATACACTATTTTAAGCAGTAAAATCTGCACAGTGGTTGCATCCAGACTATACAGCATACCGGATCATGAAATATACTAAAATGGATGAGTATTTGCAAA----GTAATGATCTTGAAA--ACTTGCATGAAGAGAATGTAAATAGATGGACAGGAGG------TTTACACCCCTAAC--------AATCTAACTGGTCAGAGGACTTACCAGACTAGTAACAAATA---------TTAG-ATTCACCGACTATGCTATAA-ATTCAATAAAGCTACCTGTAATGTTTTATTCAGCT--AATGATACATTAATCATCCTACATG-------------------------TGACACTTATAATGAATGTACATTAA-----AGTATATAAAGGAT----AAT---------TATAAACCT---------TGTAAT--TTATTCACCTCATTTCTTAATATACCTATTAATTATATAAAAACA------AAATACATTAAAATATT------------------------------------TTTTCTTATTGAAATTTCTACCATAAGTTTGAGTCTGTTAAGTAGCATAAAACCAACTGCCTTAAAAAAAAAATAGAAGTTTTTTTCTGGAACTTTGCCATCAAAATAAAAACTTAATTAGGAAAATTAAAATATACATT--------------------CATTAGTAT--ACATGCCCTAATGTCATTTTTTAACCTAATTACTAAGTC----------TAAAATATTATACTATAAATCTCGATTTCAAGAATATCAAATATTTTTTACAAAGTAATCAAAATTTTTAAATTGGTA----------GTGCTGGGCCACAGGTCAGAAATCATCATATCACCTGTA-----------------------TAAAATGTCTGAAAACCAGTCTTTGTTTTTAATATTTGAGTAGGTACTTGTTTA--------TTTAAGCTTTTCAACTAAAAAATGAGAAATAATAAAGTAATGAGACAAGAAGTTGGTGGCTTTTCAAATTAAGCATCAAAACAAAATAGCTAATAATGAAATGCCA--CATTTG-----AGATTCTCTGTGT---ACAACTGGCATCTGTGAAAAAAACTCCTGCAAAA-ATAAGCTTCCAGCATCTGTATTATGTGATCTGTGTATGTATTCAGCTAGTGACTGCTGTTAAGTATTCTGAATGCAGCATAGATTATCCGTAAGAGTGAGAATAATAAAATTAAAATGACATTTTCAGTTTTGGATACAATAAAAGAAAATACAAATGAAACAAAGTACGCATATGTTTCTCCTTAAACCTCTTGCTGAACAATAACCCAGTAATGGAAAAATTGGAATTCTTTTTTTTCTCATGGGATATCTCCTAATCTATTTTTCACTGGTAGCCAAATACAAACTATCACAAAATATAGCAGAGTATATTACTAAGGAGATAAGAAGAATACCTCCATTACCAAGAGTTTTCATTACCTACTCTAAAACTTTCATGGGGAGTTGTCTGATAGATGGGGTGTCTGAGAGGTTAACATATTTCAATAATAATTGGAATGTATTAAACCCCTTCCCACTGTATCACTCA-CATTTCAGTACATGAATCTGACATTACACTTGCAACCATTTTCTCCAAATGTGCTTCCTCACAGAGGAGAGAGATGGATGGTTTATAAAGTCAATCAAGATAAACTGCTTTTAATAAAATACTTTAAACAT--ATAATTTAACCATTGAAATTGAAAGGACAGCATT--TTAAAGCCCCAATTGTTCAGAAACTAACTTAAAACATAAACCACTCTTTCTTTGTTATTATTTCCCCGTATTTCCCACAAAATGTGCTGCAACTGGCATCTAAATAGTTTCTTTGC-ATGGTGAAGTGAAACATCTTGAATGCTCAAACTGTATTTTTATGAGTGCCTAGGGACCCTAAATTTTAGTGGTCTATTAAATGCCAGCAATTTCATGCTGCCTTGCATAAAACAGCATTCACATATTAGAGCACAGAAGTTCCATAGCTACATTATACTTCTGTTCCAACTTTAAACAAAAAACTAAAACAGAGGCAAATCAAAATAATATTTTAAAAAATAATCCTTCCCAATCTTTTCACATTTTGTTAATACA---ATATCTGTTGACAAATGTACAGCACTTAATTTTTTAAAAGCTTTTCACAATTTTATAAGCAACCATTGTTTATCCTC----------AAAAAATGTATAGTAGCCAAAAACAGGGAAGGAGT-------------GGGAGAGTATA---TAAACTTTTTCTTATA-----CCCATGGACAATATGCTTTCAT---GATAGATTGTGATGAAAGTTAACATCCCTAAGATAAATTTACTGTTTATATACATCTTCATGTAGAAGCAGC---CCCAAAATTTTACACATTTCTTTCTTATGCCACTTATTGTTAAGATTTTTTTAT-----AATCTTCTACGTTAAGACTTTTTAGTCTCTTACCTGGCAATGTTATCCTTCTCAAAAAGAAATCCAGTCCTATAGTTTGTTTGTACTGTTTCCCAAAAGTTTCTTGAGCAAAACACGTAGTTAAGGAGGTCTAAAA chr4 - 94230402 13828087 13828086 13830820 80399583 80399582 80402316 2734 AAAACAAGAAGAACGTATGTATAAAGTAAGTCAGTTCTTAGAAACAAAGTTAACATACAATAAAAGTAACTGAAG---AATCCCAGAACAGTAAAGTGCT--AGCACTTCT-TTAGTCTGTAGAAAAAG-CATGCAACTA----CAAAACTAAAATAGCTAAGGCAGCACAGTGCAGGTATTCCAGGCCATTTCTGGTATGAACTGAAGCCACTGGACTGATTGAACACTGACCCCACAGAGGTACACTTGGTGCACTGGTTAACCTTACTTAAAGTGCTGCACAGTCAGGATGGAACTAAAAACACGAGCCTGCCCACTTCTTGCACTGAAGACTTAAAAAATCCTTTTCACAGAAGAATCTTGTTTACTGGACTGCACCCACAGCCTTCCTAAAAGGTATTTGACTGTGGCACTTCAGAATTTCTATCAGCAGAACCCCTGACTAACATATAAGCTATTT-AAGCAGTAAAACCTACACTGTGGCTGAATCCAGACTATACAAAGTACTGCATCACAAAATACACTGAAATTTATTTGCATTTGAAAAAAATGCAAAAAATTTCAAACAAACTGCATGAATT---TTTCAGCAGATGAATAATAGAAGACATTGTTCACAATTAATCAAAGTTTAATTAAAGTCATCAGTGAAATAAACGGCAAATAAATAAATAGTCAAGAGATTAGTATTTGC--ATCAAGCCATATTGTTTTAGCAAGTAAAATATTCTCCTTTTTTTAACTTTAAGATTGCATTAGT--TCCTAAAAGAAATGGTGAAAAATAGACTTCTTATTAAAAATAATAATACCAATACTTTAATAAAGAAGTTAAAATGGATTTTGAATACACCGTGATATAAACTTCTGTGAAATTGTAGTAATTGGTAATTTCAACTTCTGAAACGTTGCTTAAAGG-AGAAAAGCACATTTCAAATGCTGTAAAATAGTCAACTGCCAGCTCTCCTACAGAGAAATCACGGCTCATTTTCCTACTGATATACACATTATAATTCT-----TGTGTAGCAGTATGAATTAATGCTTCATGTAAACAGAACGG----------------CTCTGC-----AAACCCAGAACTAATCAAGAAATCAGAAAGATCCATTTACCTAAGTAATGCTTTCCACACTGGTATTTAGAAGTTTTACTCTCCTCTCTCACTCTCCCCACCAGCTCACCTTACCTATAAAACAT------ACAGATTTACATCTCC------CTAAATACATGTATCGGCATGAGCATAAACTGAAAGACGACATAATGAAAAAATGCCTTTTCCCAAATATGAATACATTCCACCTCTGTTAGTATTTTGTTAACAATAAACAAGTAAAATAGATGCAAA---GACTTTGCTGTTGTTTT-------GGTGCTATTTTAATCTACTTTCTGATTTTATTAAAAAATAAACTAGAAGTAAAATACGAATGGGTCAATG-GATGATAATTTTCTACGTTTTCTACTTAAAAAGAGCATTTAG------AATCCCAGTCATGTGCTAATAGCTCCTGCATGCTTAACAACTGG--------AAAAAAAACCCTGCAAAATACAAGTTCTCAGCACGCAAACAGCATGATTTGTGGACATATTCCACTTTCAAGTATCGCTATAAGCAGCAAAAACACCAAAGCAAATCAGTGATCGTAAGAATATC----TGAGAAGGTCATTCT--GTTTC----ACTTTAGAAAAATATATAAACATAACCAAG-------ATTATTGGCAATGTAATTTTTAAGAAACTA-AGTTCAG--------------GAATCCCGTATTTTCTTAC-------------AACTTTAAGTTACAGTTA---AAATATTAACTATCT------------GAGTTGGTTTCTC-----------------CCTCCACTTCTCAAGGCAAAAAACAC-------AGAACTTGCATCA--------------------------------------------------------AATTTATCAAA-----TCTCACTACAACTTCCATCATTTAA-----------------------------CATTTTTTCTAACTTTGATTTCTGA-------------------------------AAACAGAAGAAATTGCTTTTAATGAAAAACTTTGAGGCTTGGAAACTGAGCGACCACAAGTCAATGAAAAGACTTATTTGAAACCCCAATTGTTCAGAAACAAGCTTCTAGCAGCAACTATTCTTTCTGA---ATTATTTCTTTGCATTTTCCACGCTGCGTGCTGCAATTGGCATCTAAATAGTTTCTTTGCCGTCGTGAACTGAAACATCTTGAATGCTCAAACTGTATTTTTATGAGTGCTGAGGGACCCTAAATTTTAGTGGTCTATTAAATGCCAGCAATTTCATGCTGCCTTGCATAAAACAGCATTCACGTATTAGAGCACCGCGATTCCATAGCTGCATTATGCTTC----------TCACACACACAACCCAAATA-----CGCTGTGTATTTCATTTGAGAAAATAAAACT----ATTTCTTTCA--------GAACACAGATACTTTTCCCAACGAGTATAC-------------TTAAAG---TTCCATTGTTTTATGCTTAA-----GAGTATGCTCTAGTAGAGATAAAAAAAAAAACATGAATACAGACAGCATAGTACTTCTCCTACTTGCAGGCAGTGTTTAACTTAAAATCTTACAGATATGTTGCAAATACATAACTCTTTGTCACCTGGCAAGAATATGTTTGGAGAAAATTTACTTAGTAACCtttttttattattattattttacaataaaaaGCAGTGTACTGAGCTTATTTAGCATACATTACTTCAAAGACTGTTTCTGCAGGTTTTACTGTGTCCCAATCTTTCAGTGATGGAGTCCTCATTCTCTTACCTGGCAGTATGATCCTTTTCAAGTAGAAATCCAGTCCTATGGTTTGTTTGTATTGTTTTCCAAATGTTTCTTGGGCAAAACGCATGGCTAAGGATGTCTAAAA ...x......-----...:.x...x::..:.---....x.xx..:....--.....-:..x:...x.:x.x...:---.......-....-:...:....--.:x.:.:..-..xx......::...x.-....:.....----x....x.......:x.:...:::..x.:::......-----:.::::..:.........:.:.......::::xx.:..x....x.....::::.:.:.............x:..........................:.....:.................:..:..............:...:........:...-..:.........x....:x:..............:.......:x......:....xxx.......:x...x...x....x:.............:.:..........x...x:......-...........:..:...x....:..x..............:x:...:.x....::.....:...:....xx..xx.:.....x...----.:..x:.x:..x...--.x:........xx---.x.x.::.....:.:.:x..:------.x.x...xx:...:--------...:x..x.x:....x.:.x.x.x.:.xxx.xx..:.....---------....-...::.--.::.x..:...x-:..:x.xx...:x.xx.:.xx.x:...x..:.:..--..x:x.:.....:.--.....x.x.-------------------------.:.x.x.x.....:xxx:...x....-----.:xx..x..x....----...---------.......:.---------....:.--..:x.x.::...x:.::.:.x.::::xx....xx:-.x....:..------....:.xx.......x.------------------------------------.....:..:...x..x:x:.::....x.:.-----...xx..:..:..:..x:x.xx:x:.x.:x...x.:..::.----------------..:...-----...:xx.:.x:....:.:....x:x:...x..x....--------------------..:.:....--.x.x.:::..x.x..x.:.:.:.x:..xx::..:.:x..----------.....:..------.:.:..:.xx..:..x------::.....:x.x.xx.::x:.:.x..x..x:.xx..:x:.::.----------:...:xxx:.x..::.xx...xx...:x:.:.x.:xx..-----------------------......:xx..x...---.x.....:.x..:x.x.-------...:..xx....--------.:.:.x:..x.:..xx..x...:x....:...x.x.xx....:.x...x:-.x..:.:::...::.x:..xxx:.::x...x.:.::.x:..:------...x...--...x..-----..x.:..x::..:---........--------.......x:.........-.:...:.::.....:x::x.:x:::....:....x.::.....x:..xx::.x.:::.:..x:x::xx::..x:..x..x..xxx...x..:.xx..:......x:----.x.:..x.x....:.--....:----..xx..:..:..x...:...::x...x...-------..xx..xx.xx.:x.x:.:..:xx:...x.-.:::...--------------....:.:x.x......:.:-------------.x..x.xxx.:..x.x..---.....:x.......x------------....xx:..x..x-----------------......:.x.:x.::.:xxxx.x:..-------.:.....x...x:--------------------------------------------------------...x...:...-----..:....::.x.x::..-.....x.-----------------------------......:..:..x.x..x..:..x.-------------------------------..x..::.x...:..........:...x.....:.:xx.--:x..:.x.:.x.:::x..x.x..x.:.x..xx..--..:..:..................x.:...xx.:..xx...:.:.......xx---........:::.:....:....:xx::.........:.......................-:.x.....x........................................:x.......................................................................:...........x.x::..........:......:....----------.:.x...x.x...:x...:.-----x:x.xx:x..xx:....x.:.......xx..----.x.::.....--------x..:...---.:x.:.x:::..:.:.:...-------------.....:---..:..:x:......:xx:..-----.xx...x...----------......x:x.xx:.::x:.x.:....x:x..x.x.-------------..x..x..x..---....x.:..x.xx...-----.xx..:x.:..:x:x:.x...:---.xx...x.:..x.x::..xx..:x.x.:..:x.xxxx...x:.:..xx...xxx.:.x..xxx.:......:---.:x.:xx.x..xx:...x:x..x...xx:xx...xx..x.xx..:....x:.:.-----......::.xxxxx:..x.::.:.x..............:.:.x......:....:x................:...........:.....:.....x........:.......:.:.:.:......x........ 10M5I16M3I15M2I5M1I18M3D7M1I4M1I9M2D9M1D17M1D10M4D36M5I157M1I119M1D87M4I15M2I13M3D21M6I14M8I41M9I4M1I6M2D12M1I35M2I14M2D9M25I26M5I14M4I3M9I9M9I6M2I35M1D9M6I17M36I30M5D41M16D6M5D37M20I9M2I39M10I8M6D16M6D42M10I39M23I15M3D17M7D12M8I50M1D42M6D7M2I6M5I13M3I8M8D18M1I106M4D15M2D5M4D30M7D30M1D7M14D19M13D18M3D15M12D13M17D26M7D13M56D11M5D17M1I7M29D25M31D39M2I34M2I53M3D60M1I161M10D20M5D31M4D10M8D7M3I20M13D6M3D20M5D10M10I35M13I11M3I16M5I22M3I72M3I54M5I136M 1648/2451 67.2% 2734/94230402 0.0% 622/2451 25.4% -351344 -93879058 +5318 chr4 + 190214555 13483961 13483960 13484163 203 GGGCCTAGAAGCCCGAGGGCTCGGGGTAACGAGGCGACGCCGGGCGGCGGGGAGGAGGCCGGGGACCGCCGGGGTTCCTGCAGGCCTG------------GGACGGCGGGCCTGCTCGAGG----------ACTGACCTTCCCGGAGGCGCCGTCCCCCAGCACGACGATTTTCAGTTGCCGGTCCTGGCTCTCCTCC---TCAGAGTCCGACATGGT-GTCCCGGGAA chr4 - 94230402 13837422 13837421 13837641 80392762 80392761 80392981 220 GAGCCGAGGGTACCGAAACCTCCCGG-AGCGTTTCGCCACCGAGCG-CGGAGCGGACTCGGAGGTGCTCCCGGAGAGCGGCGGGCCCGAGCAGGGGGCGAGGAAGGCGGA-------GAGGGAGACGCGGCACTGACCTTCCCTGCGGTGCCGTCCCCCAGCACCACGAGCTTGAGCTGGCGGTCCGGGCTCTCCTCCTCTTCCGAGTCAGACATGCTCGCCGCGGGGA .:...x..::xx....::x...xx..-.:..xxx..x.:...:...-...:.x...xx.x.:..xx.x..x..:xxx.x..:....:.------------...x.....:-------....----------............x.x..:...............x....x:..x..:..x......x...........---..x.....x......x.-.:.x....:. 26M1D19M1D41M12I10M7D4M10I67M3I17M1I10M 141/194 72.7% 220/94230402 0.0% 35/194 18.0% -353461 -93876941 +3364 chr4 + 190214555 13504320 13504319 13504377 58 CTCTTAAAAAAAAAAAATAAAAAAAGGAAACACACACACACACACACACACACACACA chr4 - 94230402 31590334 31590333 31590391 62640012 62640011 62640069 58 CTCTTTGAAAACAAAACTGAAAAAAGACAGCACGTGCACGCACACACACACACACGTA .....x:....x....x.:.......:x.:...:::...:...............::. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -18086014 -76144388 +3058 chr4 + 190214555 13511835 13511834 13511882 48 TTTTTTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGAGAGAGTCT chr4 - 94230402 53820127 53820126 53820174 40410229 40410228 40410276 48 TTTAATTTTTTTTATTTTTCTTGAGAGAGAGGGAGAGAGAGCGGGACT ...xx........x.....:...........:.........x.:.x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -40308292 -53922110 +3056 chr4 + 190214555 13511836 13511835 13511886 51 TTTTTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGAGAGAGTCTCGCT chr4 - 94230402 67837428 67837427 67837478 26392925 26392924 26392975 51 TTTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGACGGAATATTTTCCT ...................xx................x:..:x:.:.:x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -54325592 -39904810 +45824 chr4 + 190214555 13516207 13516206 13517473 1267 AGAATTGTAAGAGAAACATTTTGTGAACTGTG--ATATAAAGGTGATGGAAAATGCAGGCCTGTTAG--------TGACATAACACATCCATTCTTGAATCCTGCAAAGGATATTATGTGAGCAAATGCACATAGTGAAACCTAAAAAGGTTCCAGTTTTTAAATGCTGAATGCTAGAGAGCTCTGCTTTTACCTGCTGTGATTTAAAAGGCTAGAGGCCTCATTTTAAGCCACTAAAATTCAAAGTGACAGAAACCTACAAATTTTTATTGCTGTGCATTTAATAAAATTTACATTTACAAGCTGTCAGTTTGAAATGTTGA--------ATAACTGGTACTTTTGCATTCAGAAGAGCAGATTTGGTTGTGTAGGGGGTTCATTACTACCTACTTAC-ACGTTCCTTAAATACTCAG--AATAATCCTTCAATCTATGA--------CTTTTGATATCTC--TTAATTCAACACTGCACAAAA--------------ACACCATTGAGTTTGCAGTAAGATCAACAAAAGGAATTTATTGTGCTCCTATAA--AGCAAGACATAATTAAGAGC-CCCTTTCTGCTTGTTGTA-GTGCTAATACGAGAACATTAGAACCAAGGTACAGTCTATTGCTAGGTGTCTGCAGCAGCTGCCT-GGTTTTTTGGTAATTTACTTACTCAATTATGTCGACTCTCTTAAATCCACAACACTGGTGGGTGGTAAGGTAGAGGGATAATAAAAAAACATAGAGTAGGAAACCCCTTTAATGCATGTTTTATGTGCATCTTGGGTAACATTTTTTTTGTTTGTTTGCTTTTGAGAACAAGAATTAAAGATTGTAACTTTAGGAAACTCTCAGCACAGGAATAAACCTGCATGGGTTTTAGACAACTTTAAAAATTATGAGATGTCTAATAATCCTATGATTATGTGGTCTGTTCTGAAA-AAGAATATTAAACTAAATGTTTGACTCAGTATTACAAAAACAGATTATCTAATGGCTTCCAAGGGGGAAATATGAGAAGGACCATTCATAAAGTTCCTTAATAGTAATAAATTATACACACTTCCTTATTTTCCATGTAAATGCAAAGACAAGGAGAAACTCTGACG-------GGATGTGTTCTCACAG---CTTTATAAGAACCACCTTTAATAAAATGTCTTCGAACTCCT-----------GTCAATTTTAATCCAATATTCCTTTCAAATGAGCATCAGAAAA----AAATGCTCACTACACTTATGAATATCTAATTTTTTCTTAATA--TTCAAAGAAA-------GTTTGAATGCCAAACTCAAAGTTTTAATTTTTAGAATGCATTTGTTT chr4 - 94230402 13848417 13848416 13849738 80380665 80380664 80381986 1322 AGAACGAAGAGAAGAAAGCTTTATACAATATACAATGTAAACATAACAAAAGGCACGAGCCTGTCAGCCTATCATTGACATGAGACATGCATACCTGGATTCTGACAACGATATTTTGTGAGCAAATGCA-ATAATGAAGCTTTTAAAAGCATGCATTTGCGGATGGTGACTGGTGTAGGGCTGTGTTCATACAAGCTGTGATTTAAAAGGCTGGAGGCCTCAACGTGAGCCACTAAAATTCAAAATGACAGAAACTTAGAAAAAGTTATTGCTCTGCATTTAATAAAATTTACATTTACAAGCTGTCATTTTGAAATACTGAATAACCCCATAACTCCGAGTTTGGAATGCTGAGCACCAGTTCAGATTGTGCCTGAGGTACATTGCTTCCTATTTACAATGTTTCTCAGATGCTCAGAAAATAATCTTTCAGTCCAGGAGATGTCGTTTTTTTATATCTCTGTTAATTTAGATTTGTGTCATACCCGCCCCCACCCCCCACCCCCAAATTAAC--TAACTTTGCATGAAGAAATATGTCCTGTCATTAAAAATAAAAAGGCACAATTAAAAGCTCCCTTTCTTCATGTTTAATGTGCTAATATGAGAACATTAAGGCCAATGTACCATCTACTGCTTGGT---TGCTGCAGCTGTCTGGGGCTTTTATTAATTTACAGACTCAATCATGTAGA--CTCTTAAATCCAGAACATTGGTGGGTGGTAAGGTAGATGGCTAATGAAGAAACATAGGGTAGGAAACTCCTTTAATGCCTGTTTTATATGTATCTTGGGTACCATTT---------------TTAGGAGAACAAGGATCAAAGATCGTAACTTTAAGAAACTCTCAAGACGAAAATAAATGTACAC-GGTTTTAGGCACCCCTAAAAATTATGAGATGGCTAATATCCCCATGATTCTGTGGTCTGCTCTAAAACAAAAATATTAAGCCAAATGTTTGGCTCTGTACAATAAAAACAGATTATCTAATAGTTTCC-AGTGGGAAATATGAGAAAGACCATTCATAAAGCCTCCTAATAGTTATGAATTATAAGGACTTCCTCGTTTTCAGTATAAACTGAGACCCTGATAGAAACTGTTAGATATTTATGCATATGCCCTCAAAGGGACTGCACACGGACATTTTTAATTAACATTATTTGCAACACCTTCCTCAAGTTGTTCATTATTAATTTGACATG-TTTTGAAGTTCGTACCAGAAAATTTTCATCACTTACTCTAATTACACCATTCTTATGTGACTTTAATACTTTCAAAAGGATACAGTGATTTGCAATTTACACTTA----TTTAACTTTAAAAAAAACTTTGTTT ....:x:x:...::..x::...:.:x.x.:.:--..:....x:.:.:::..::::.::......:..--------......:.x....x...x.:..:..:...xx..x......x..............-...:....:.:.xx...:.:x:xx:...x:::...x...x..x.:x..:...x..:.:x...xx..................:.........x:x.:.................:..........:..x...xxx........x..................................x........::...--------......xxx.x...x.x..x.x..:x.x...x.:x.:.....:xx.:...x....:..x....:....-.:...:..:.:..:.....--.......:....:..:.x..--------:....x.......--......:.:xx:..:::x.x.--------------x....x:::.:..x:.--...xx.::xxx:...:...x.:.:x..::x:..x..--.:x...:..:......:...-........x.x....xx.-.........:..........:::....x....x:....:....x...---...x.......:..-..x:....:x........xx.......:....x..--............x....:...................x..x....:..:........:.........:..........x........:..:..........x.....---------------..xx.........:..:......:.........:..........:x..:::......:x.:..:-........:..x.::................x......x:..:......x.........:...:...-..:........:.:.........:...x...:x.:..................:.:....-..x..............:..............:::.:.......x..:.......x:x.......::.....x:.:....:xx.:.xx.x::x.......x.x.x:-------.x..:..::....x..---..x:.:.x.:..xx::..x.x...x..xx:..xx...x...-----------x...x.x.....:::.:..x-:...x..:.xx.:.:.......----x.x::..:...x:.x...::xxxx...x..x.xx::......--......:::.-------:....x.xx::.x...:.----.....:...x.:..x:xx....... 32M2I33M8I55M1D192M8I68M1I19M2I20M8I13M2I21M14I16M2D36M2I20M1I18M1I47M3D14M1I35M2D107M15D64M1D67M1I60M1D106M7I16M3I41M11I20M1D22M4I42M2I10M7I18M4D25M 901/1237 72.8% 1322/94230402 0.0% 115/1237 9.3% -332210 -93898192 +10515 chr4 + 190214555 13529256 13529255 13529469 214 GGGCGCGGCTCGGGGGTGGAAGCCCTGGGCGACAGCACAGCTTCGCTGCGGCGGGGAAGGAGGACCGTCGGGCCCAGAGTTCCCGCCGCCACATATGGTCTGTGGATTTAGGTGTCAAAAACCGGAGAATTAGAAATGGTAATTTTCCGTCATTATGGCTGAAATGCGATCTGTCACAACAACTGGAACATGTCTCCGCGCTAGCGAAAATAAT chr4 - 94230402 13853179 13853178 13853389 80377014 80377013 80377224 211 GGGCTGGGGCCGGGGGGGGGCATCCCAGGTGCCGG-GCATCCCCG--GCGGAGAGGGGCGAACGCCGTCGGGGCCGGCGGCCGCAGAGACACATATGGTGCGTGGATTTAGGTGTCAAAAGTCGGAGAATTAGAAATGGTAATTGTCCGTCATTATGGGTGAAACGCGATCTATCACAACAACTGGAACATGTCTGTAAAGGGGCAAAAATAAT ....xx..x:......x..:x::..::..:.x.:.-:..x.::..--....x.:..::x..:x:........x..:.x.x:.x.:xx.x..........x:...................::......................x.............x.....:.......:......................x::x:xx:..:........ 35M1D9M2D167M 158/211 74.9% 211/94230402 0.0% 3/211 1.4% -323923 -93906479 +9816 chr4 + 190214555 13529429 13529428 13529623 195 TCACAACAACTGGAACATGTCTCCGCGCTAGCGAAAATAATGTTCGTG-ATTAGGAATCATTACGCACGTCAAGCCGAGTCCATTAAGTTGTAGGGAGAAATTAGCCTTGACGGGCAGAATCAAACTACAAATACACAGG---------------------CCTCGCCTTCA----GGAGGCCAAGCGGCGGCAC-TCGGGAGGAGGCAGCCGGAGTCGGTG chr4 - 94230402 13853956 13853955 13854177 80376226 80376225 80376447 222 TCACAACAACTGGAACATGTCTGGGCGCTAGCAAAAATAATTTTTATGCATTAGCGATCATTATGGATGTCAAGCCGCGTCCATTAAGTCGTATGAAGAAATTACCCTTGACGTGCGAAATCAAACTACAAATACACACGGAGGGCACGGAGGGACCCTCCCCGCTCCTTCACAGCGGCGATCGAGGGACGGGGCGGGGGGGGGGGGGAGCCGGAGCCGCTG ......................xx........:........x..::..-.....x:.......:.x.:.........x...........:...x.:........x........x..::....................x.---------------------..x.x......----..x.::.:..x.:...x:.-xx...:..:..x........:..x.. 48M1I91M21I11M4I19M1I26M 158/195 81.0% 222/94230402 0.0% 27/195 13.8% -324527 -93905875 +3212 chr4 + 190214555 13532993 13532992 13533053 61 CTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTATGGGCACAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.........x.x...x.xx.x........:..:.........:....::x.::... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -4664146 -89566256 +3047 chr4 + 190214555 13538353 13538352 13538461 109 CTGTCTCTCTCTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCTCTTTCTCTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTC---CTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGT------TTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .....:...---......:....:.....:..x::..::x.x.:::x:..:xx....xxx:....x.------......:...:...:.....x.xx..::....:... 9M3D55M6D36M 67/100 67.0% 100/94230402 0.0% 9/100 9.0% -29543572 -64686830 +8682 chr4 + 190214555 13542135 13542134 13542453 319 CGCACCAGCACCTTTACGGCCACCTTCTTGGCGGCGGGCGCCGAGGCCAGCAGGTCGGCTGCCATCTGCCGGCGCTTTGTCTTGTAGCGACGGTTCTGGAACCAGATTTTCACCTGCGTCTCGGTGAGCTTCAGCGACGCGGCCAGGTCTGCGCGCTCGGGCCCGGACAGGTAGCGCTGGTGGTTAAAGCGGCGCTCCAGCTCGAAGACCTGCGCGTGGGAGAAAGCGGCCCGCGAGCGCT---TCTTGCGTGGCTTGGGCGCCGCCGGCTCCTCCTCCTCCTCCGCGACGCCTGCCGGCCCGCTGCCGCCCCCGCCGCCGG chr4 - 94230402 6788514 6788513 6788815 87441588 87441587 87441889 302 cgccccgccgcccgccccgccgcc-----gccGGTGGGCGC----GCTGGT--GTCGGCGCCCGGGTTCTGCTTCTTCCACTTGGTGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGAGCGCCAGGTTGAGGCGCTCGCACACCGACAGGTACCGCGTGGACTTGAACTTGTTCTCCAGCGCCACCAGCTGCTCGTAGGTGAAAGCTGTCCGCGCCCGCCGGGGTTTGCCCGACTTGGAGTCCG--AGCCCGTGCGCTTCCTCTTGGGC-----TTGGCCTGCTGCTGCCCT--CCGCCGG ...x..:x.:..:x:x.x...:..-----.x...:......----..::.:--......xx..:xx.x.:.x:x...:xx....xx...:.................:....................x:.x.....x:xx.......:x:x.......x:.x.x........x...xx.x:x..:..x:x.:x.......x.x.xx.x....x...:..x......x.:.....xx...:---x:....x:.:.....:xx...--:..:.x.x.x.:.....:xx.:.-----::....:.....:....:--....... 24M5D12M4D6M2D188M3I21M2D23M5D18M2D7M 204/299 68.2% 302/94230402 0.0% 23/299 7.7% 6753621 NA +6942 chr4 + 190214555 13542136 13542135 13542392 257 GCACCAGCACCTTTACGGCCACCTTCTTGGCGGCGGGCGCCGAGGCCAGCAGG-------------TCGGCTGCCATCT------------------------GCCGGCGCTTTGTCTTGTAGCGACGGTTCTGGAACCAGATTTTCACCTGCGTCTCGGTGAGCTTCAGCGACGCGGCCAGGTCTGCGCGCTCGGGCCCGGACAGGTAGCGCTGGTGGTTAAAGCGGCGCTCCAGCTCGAAGACCTGCGCGTGGGAGAAAGCGGCCCGCGAGCGCTTCTTGCGTGGCTTGGGC chr4 - 94230402 12453575 12453574 12453865 81776538 81776537 81776828 291 GCGCCGGCCACTGCTGGGCCGCCCAACGGGAAGGAGATGCCGAATGCAGCAGGCGGGAGCATGGGCTTGGCTGCCATCTTCAGCTTCTCCAGCTCGGCCTCCTGCAGCCGCTTGGCCTTGGCGCGGCGGTTCTGGAACCAGATCTTCACCTGCGTCTCGGTGAGGCTGAGCGAGCTGGAGAACTCGGCACGCTCAGCGATGGACAGGTACTGCTTCTGGCGGAATTTCCTCTCCAGGGCCAGCAGCTGGGCCGTGGTGAAGGGCGTCCG---GGGCTTCCTGTTGGTCTTGTGC ..:..:..xx..x:xx....:..:xx:x..x:.x:.::.....:xx.......-------------.:...........------------------------..x.x.....x.:....xx...:.................:....................x:.x.....xx:..xx.:x..x..:.....:.xxx:.........x:...xx...:x:..x:xx.x......xx.x.:x.x...x..xxx..x...:.xx.:...---.x.....:..:xx.x....x.. 53M13I13M24I166M3D22M 171/254 67.3% 291/94230402 0.0% 40/254 15.7% 1088561 NA +3720 chr4 + 190214555 13560842 13560841 13560964 123 AGTCTTCCTCTGTCACCAGGCTGGAGTGCAG--------------------TGGCATGATCTTGGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAATAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197064 18197063 18197199 76033204 76033203 76033339 136 AGCTCTCTGCAGTCACCATGCTGG-GAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:::..:x.x.......x.....-.x....--------------------......x..x..------..:..:..:xx:x..:.::........::x...x.xx.x........::...:.......:......x...... 24M1D6M20I12M6D74M 84/116 72.4% 136/94230402 0.0% 27/116 23.3% -4636222 -89594180 +37569 chr4 + 190214555 13568716 13568715 13570106 1391 AATAAAATTCTTACCACTCAAATTTT-GGTAAACATTTTATAATTTATATATAAAA-TCTCAGTAAGAAACCATGTAAAAT----GACAGAAATATCCACCTTACATTAAGAGTCAAAATAAA------------AAAAAAAACCCATACACACTG-------------------AATGTAAA---------------------------TTTTAATTATAAAACAAGAATATGAACAAAACATTTTAAAATAATCTCA-ATTATTTGGCAACTCATCACATCATTGCAAGAGACAAATTTGATCGTAAGAAG---TTTAATCTTATGAAAAACTGAAGTTGGACAGTTTGCTCATATGAGAGTTAAAACATGTTTAAAAAAACACTTGGCAATAAAGCCAGTTTCTATACTGAAATAACTGTGTATAAAA--CAACATAAAATCCTGAAACTGGATAGACAGGAGGGACCTAAT------CTTGAATGCATTTCTCTTCACTGAAAAAGACAA-TATGGAAAGA----GTATTGGTAGAAGCTTCAGAACAGCACAGAAGAGGAATGAACACAGAGAAGAGGAATGAAGAGGGATTTCTGCTGCAGGTGACTGAC-GCAACTTTACCTGAACCAGAACCTGTTTTGTGTCAACGTGGCTGGTAGTAAAGTCACAGATG-CAAGTATAATCTAAAAA----------CAAGTTACATTCTTAAAAAACAGAGCCACAACTGTGAACAGAAAAGCAATGAAGAACC---TTTCTTTAGCTAAACTACTTTACTTGGATACATGCGAG-------TTTCTGCCA---GATCATA-TTAAGATAGTTACAGAGCAGGCAGAGTCCTAA------AAAATTTTCTACTAATGACTGCATAGCATTTAAAACCCTTTTTATTTAAAAAAAAAATAAAGTAAAATAAACAGATATATAGTAAAGTTCACAGATAAGTTTTCTCTGTAAAATAAATAAAGTGTTC---ATTGATTAGCATCATACATAGAGTAAAATACAACCTATTTTTACATGTTTATATACTATACACAGATTACCAGTAGG-CAGCCTGGCGTCTGATGGGCTGGAGGGGTTTGCATTCATGATGTGTCACATTGGGAAATCCCAATTT------TGAATGTTAAAATATACAACTACTTTGTTTTGAGTTCAGATACAAAGTAAACTTATTGTCCTTTATCTGAAATAAATGTACATAATATCTTCTATGAACAATAGTTTATAAAGCTGTTTAAAACATAACAAGAAAAAGCTTGCACCTAGGGACTTA------------CAGCACATGCATATCTTTTTCCTGGTTAAAGAGAAGCCTATGGCCACCAAGGCATGTCTCTTTCCTCTCCACCGTGTTCCTCCATAAGCCTAGGGCAGCAG-TGGTCAGGATTATCGCTTCGCTTTTTTCACAGGGGCTTCCTCCACCCTTTGCTGGCCTCTTGTTCGGGCCCCAGGAGGGCTGACTTCTCTCTTGCGCTTGATAGA chr4 - 94230402 13871484 13871483 13872903 80357500 80357499 80358919 1420 AATAAAAT-ATGGCAACTCAGATTTTTGGCAAACattttataatttttatataaaaGTTTCAGTAAGAAACCAAACAGAATATCTGATGGAAACATCTGCCTTACAACAAGTTCAAAAACAAACAAAAAACAAACAAAGAAAACCAAACCATCCCACAAAAGAGAGGGGGGAAAAAATAAAAAAGGAGAATTCCAACCCCCCAGAACCCTTTGTAATTATAAACCA-GAATATGAACAGAACACTT-AAAATAATCTCAGATTGTTTGGCAACTCATCACATCATTACAAGAGACACATTTGATCATAAGAAAAGTTGGAACTTTATATACAACTTCACTTGAACA-TTTGCTCTTACCAGAGTTAATATACATTAAAAAAAGATTCTGGCAATAATACCAGGTTC-ATTTTTTAATACCTGCGTATAAAATGTAACATAAAATGCTGAAGCTCTATAGTTAAGAGAAG--TGATGTTTCATTTCAATGGGTCCCTCTTTGTTGAAAAAGACAACTACTGAAAGAACGGGTGTTT-----AGTTGCAAAATA------AAGTTGCTCCATTTCAGAATAG-------------------------AGTTGGCTGGCTGCAAATAAACCTCATCTAACATTGTTTATTTCTCCA---GGTTGGTAGTAAGACCACAAAAGAAAAACAGAATCTATTAAGCTCAGACTTTAAATTTCATACTT---------TGTCTCAAGTGTGAAGAGAA--------AGGAGCCCAGTTGCTTTCACTATGCTAACCTACTGCAATGCATGCGAAAAAAAATGTTTTATCAACTGAGTGTATTTTAGAGAACTTCAGATTTTAGACAGCTCTGGGGGAGTGAAGTTTCCTATCGACGTCTGCATAGAATGtaaaa---tatataattaaaaaaaGCCTACAG-------------TATATACTAAAGTTTACAGACCAATGCTTTCCATATAATAAATAAGATGTCCGTTGTTGATTAGATTCATACACAGAGTAAAATACAACCTATTTTTACAAGTTTA-----TGTACAAAGTGTATTAGTAGGCCAG--GGGTGTCTCAGGAGTTGGAAGCATCTGCAT---TAGCATGTCACATTGGGTATCCCCAACTTTCCAAGTCAGTGATAAAATATATAACTGCTTTGTTTTTCATTCAGATACAAAGTAAACTTATTTTTCCT--TCTGAAATAAATGTACATAATATTCTGTATAAACAATAGTTTATAAAGCTGTTTAAAATGTAACTTAAAAGTAC-TGCATCGATTAACTTAGAGCTCTGAAAGAAGCACGTGCAAATCCCTTTGCT--TTAAAAAAAA---------TAGAAGCACAGATATTTTTTTCCTCCTTTTGACTCCTCCACAAAC----AGTACCAGCTGGTAGAGATTATCGCTTTGCTTTCTTCACTGGTGTCTCTTCTGTTTTTTGCTGGCCTTTTCTCCGTACTGCTGTTGGGCTGCCTTCTCTTTTACGCTTCGTAGA ........-x.x:.x.....:.....-..:................x.........-.:..............x::.:...----..::....:...::.......x:...xx:x....:...------------...:......x.xx..:x.::-------------------...:x...---------------------------..x..........x..-...........:....:..-............-...:......................:.........x........:......:---.xx..::....:x.x....xx.x...:...-.......x..:x........x.:.::..x......:xx::.........x:....x...-..x:.xx....x...:........--:..........x.....:..xx....x:.:...:::--.:..------:..x....x:.::.....:::............-..:x......----..:..x-----..:.x..:..:.------...xx.xx:x.x:x....:x..-------------------------..x..:...:.-....x.xx....x.x.:.:x.::xx..x.x.x..x.---..:.........:::....:.x.-x..::.x......xx..----------:..:..x...x...---------x.:.x...x......x....--------.:..:..---..x....x:...x:...x::....xx:..:.......:-------x..:.::..---..x::..-..x...x.::.x....x:xx:x.x..::..::------:..:...:...:::.:.x........x..x.....---.x.x..x.........:xx..x..-------------......x.......:.....:x.:.x:.:..::..x.........::...:.---:........xx.......:..........................x.....-----.:....x..xx..::......-...--x..:....x.x.:.:....:.x:.:.....---.::::............x.x:.....:..------.x.:..x.........:....:.........xx:.......................x.:.:.--.......................::.x...:...........................::....xx:...:x:.-....:.x.xx:.....------------x.....:....x...::...x..--.....:.:..---------:.xx.:x:..x:.x.:...:::....x::xx::.......:..:.----:.:.x...-....x::...........:.....:.....x..x.::..:..:::::...........:..x.:..x:.:x.x.xx......x.......:..:.....x:.... 8M1D17M1I29M1I24M4I38M12I21M19I8M27I16M1D19M1D12M1I53M3I30M1D59M1D24M2I36M2D4M6I33M1I10M4I6M5D12M6D22M25D11M1I36M3D23M1I17M10I14M9D20M8D7M3I38M7I9M3I7M1I32M6I35M3D24M13D52M3I51M5D21M1I3M2D30M3D29M6I63M2D74M1D16M12I23M2D10M9D45M4D8M1I105M 939/1284 73.1% 1420/94230402 0.0% 243/1284 18.9% -302768 -93927634 +20642 chr4 + 190214555 13576834 13576833 13577648 815 TTACCTCTGAGCCTCTGATCTGGTGGTGGATCTTGTGGTGGCTCCTGAAGGCTCGTCCTCTTCCTCTTCTTCCTCTTCCTCATCAGACTCCTGCTCTTTCTTGTCCTCCACTGGATCAGAAACTGATTTCTGGCGTTTTCTTTCTGGCTCTGAGGATTCTGTTCAAATAGAAGGGTAACACCTGGATTTTACAATTCCCAAAGATACTTCCAAGAGAGAGAGTCATGGAGTTTAGAACTTAGGATATT------AGGGACTTGGAGGCAGAGAAATGGTTTTCCACTTCCTTTTTGTTTC-AGCACTTGCAATTCACAACTGTTTAACTTAATCTCA--AACACATTTTGGATAGTTTACATATGCAGTTCACAGCCAGCGTTCATAAAAAATTGACATGTACTCAGAAAAGCATCTGGGATGTACCATTTCTGACACGGGATTAGACCTATTTCACACATATTTATATAATATTAATATTAGCTGTACCCATTGGATTTTTCCTCATTCAAAGAAAAACTCTTTAAAAAGGTGGTTTTG-----------AAACAATAAGACTTATTAAG--------AATTTGCTAGAAACA-----------------TACCAGCATCATCTGATACAGTGAGAGAACGTTTGGGTTTTCTTCCTCTCCGACGCACACTTGTTACTATTTTTTCTTCACCATCATCCTAGAAGCAATAAAATTAAAGTCAAAAGGGTGGTCAGCTGAGCATTTAAGTTGATTTCTAAACA-ACATATCTTGATAAG----------AAATTTAACACTTACATTGCTTATACTTCTTTCTTGTAGGTTAGCTGTTTCT---TTATTGGATTCATCTTTA---AGAAAAGGGAAA chr4 - 94230402 13875747 13875746 13876582 80353821 80353820 80354656 836 TTACCTTTGAGCCTCTAGTCTTGTGGCTGGTCTAGCTGTGG---------ActcatcctcttcctcatggtcttcttcctcaccttcctcctgctctcttatctcctcttcAGAA---GATGTTAATTTCCGACGTTTTCTTTCTGGCTCCAGCATTTCTGTCCATGTAAAATTTTA-CACATGTGCTATA-ATTTTCCAAAAGCCCTCCAAAAGGATATGGACACTTAGTTTAGAA---AAGGTATTCTATTCACAAATCCCATTTTAAGCAAGTAATTTTCCATTTCCTTTATGCTTCCAATGTTTTTAATTCGCACTTGTTTGACTTAATCTTGTTAACACATTTGCAACAGTTTACTTATGCAGCTCATAGCCAGAATTCATAGAAAATTCATGAGGCTTTATGGAAGCATCTGGGATGTAGCAATTTTGACATGAGATTACAGCAATTT-ACACATATTTACATAATATTTACACTAGCTGTAACTCAATGATTTTTCCTCAAGAAAGGAGAAA--TTGAATAAAGCTTATCTTATTGCTATCAGTACACAGAAAGGCACAGTAATATCTTTTCATTCTGTTCGGAATAGCACAGTTTCTTCTTTTTACCAGTTTCCTCTGCCTGAACCAGAGAACGCCTGGGTTTTCTTCCCCTTTTACGCACAGTCATCTCTGCTTTCCCAGCTTCTTCTTCCT-GAAGAAATGAAATGGAAGCAAGCAAGACAA------GACAGTTTTAATAGA-----AGACAGACATTTTTCATTACGTACTGCATGTAGACTTACAAATTAAATTGCCCGCACT---------TACATTTGCTGTTTCTTTCTTATTAGATATGTCTGTACCTAGAAAAGAAAAA ......:.........::...x....:x.:...x.:x....---------:...:...........x.xx..:.........:.xxx..........:.:x.x.....:x.x.:.---..x::.:.....:.:.................:::x:x......:..x:..:..xxx..-...x..x::.x..-.x..:.....:::x..:.x..::..x.x:.x..:xx.........---.:.:....------.x::.:::x:xxx:.::x..:.::.......:.......x..:...-.::::..x:.....:..x:.....:.........::--.........xx:.:.......x.......:...:......x:......:......x.::x.xx:.:.x::................x..x..:.....:.:.....x.x.x....-...........:........x.:.:........x.:xxxx............xxx..:..:...--:.xx.x....x.x:.:..:-----------.x...:x...:.x:.x...x--------.x.:..:.x.:..:.-----------------......:x..x....x:xx.::x........::.............:..::x.......x.::.:x..::...::.xx.x:.x..x....-....x...:....x:...:x.:x.:.::::------..xx:...x.:.x..-----.:...-....x.:.::x..x.----------.:.:...xx.x...x.....::::...---------..x:..x.........---.....:...x::...x..---.......::... 41M9D65M3D59M1D13M1D45M3D8M6I46M1I36M2I115M1D64M2D19M11I20M8I15M17I90M1D30M6D15M5D5M1I15M10I27M9D16M3I18M3I12M 526/774 68.0% 836/94230402 0.0% 103/774 13.3% -298913 -93931489 +3935 chr4 + 190214555 13581014 13581013 13581234 221 ACTTACAGTGACAATGCCAGTATCTGTTTTGGAGTCGTCTTCTAAAAAAAAAAA-ATTCACTTAGAAAATCGGTTCGAAAATTTCTTGTGTGTGAACTGAAAACACACCAAGTACCT--ACTCATTTTTAAC------GTTGT-----TTCTACAGGGTATTTGCGAGGTCTTCCTCTTTTCCTTTTAATAATTATTGGCTGATCTTCCTAAGGGGGAAATAAAAAACAACAACA chr4 - 94230402 13880489 13880488 13880706 80349697 80349696 80349914 218 ACTTACATTGCCAGTGCTCATATCAGCTTTTGACTCCCCACCTGAGGGAAGAAATATGAATTCAGAA------CTTGAATGTTGCT-ATTTTTACTCTTTCTCCACAC-AAGTATTTTGAATTACTTACCACCACCAGGCTGTACAGCTTCAACAGGATGTTTACGAGGCCTTCCTCTTTTCCGTTTTATTATCACAGGTTGATTATCCT---------ATAAAAAGTAAAAGTA .......x..x..:...:x:....x.:...x..x..x:.x:..:.:::..:...-..xx.:.:....------:.:...x:..x..-:.x.x.:xx..xxxxx.....-.....::.--.x.:.:..x:x..------.:...-----...x.....:.:...:.....:.............x...x..x..:.:x..:....:x....---------.......::..x.::. 54M1I12M6D13M1D21M1D8M2I13M6I5M5I62M9D16M 137/204 67.2% 218/94230402 0.0% 31/204 15.2% -299475 -93930927 +3326 chr4 + 190214555 13584340 13584339 13584385 46 AGTGCTCTGTGTGTGTGTGTGTGTGAGAGAGAGAGACAGAGTGTGT chr4 - 94230402 81629057 81629056 81629102 12601301 12601300 12601346 46 AGCACTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGT ..::..:..........:..................x....x.:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -68044717 -26185685 +7935 chr4 + 190214555 13592316 13592315 13592478 163 TTCATTTAAAATAATAGCGTCAAATGAAAAGTTAGATCCTATCCCCTCCAACAGCAATGGTCTGTTTATATGCTTTGGAAACATGAAGTACAAA--------GTCTACTGTTTCTACTCAACAATGACAGAACACACATTTTTCTTTTAAACAACTTCCTTTTACGTAAGT chr4 - 94230402 13886777 13886776 13886943 80343460 80343459 80343626 167 TTCAATTTTTAAAGCAGCATCAAATGAAGAGCTAGATCCTACCCACTCAAACAGCAATGATTTGTTTACATTCCAAAGAATCTTGCACTACTAAACTACTGTGTCTGCTGTTCATATTC----ATGACAGGACATACATTTGTCTTTTAAACAACTTCCTTTTACGTACGT ....x..xxx.x.::...:.........:..:.........:..x...x..........:.:......:..x.:xx:...x.x..x.x...x..--------....:.....:x..:..----.......:...:......x..........................x.. 94M8I17M4D48M 125/159 78.6% 167/94230402 0.0% 12/159 7.5% -294461 -93935941 +115856 chr4 + 190214555 13599597 13599596 13605106 5510 CATGCTTCTCTTCTTTTTCCGCACAAACAGCACTTGGATGGCCTTGCCCTGC-AGAGGGCTTGTGGACTGATGGCCCGTTGTGCCCCTCCTCGGTGCTCACTGCCAACACGGGACCCGGTTCTTTGCCTCCCCTGACTGGCCCAGGACACCGACAGTTATTCTCAGCAATTAGGCTGGGCATGGGGACCTTGTGCTTGCTCACTTCTGTGGCTGACAGGTCACCGTTCCCTTCTGGGTTGTCTGCAGTCAGCTGATTCTCTTCATGTCTGTCAATGCTGGCGGAAATTGGCATACATTCTGCTG-TGCTGGTGGAGATGATGGCAGCATCGCTCAAGTCTTCTACTCTTGTGATGGTGAGCCGATCTTCATCCTGGAGGACAGCACCAATCATGACTGCTTCACACCCTTCAGAGGTGCTTGTGGAAATCATGGCGGTGTCACCCATCTCTTCCGCTGGTGTGACTGAGGGGTCGCCTTCCTCTTGAGGGACAGCACTGGACACTGGGCCCTCACAGTCTTCCACCGAGCTCGTAGAGATGATGCCACTCCCGTCTTTTTCTTCCATGACTGTGCCAGCTCGCTCATTTTCACTTTCAACAACTACACCGGAAACAGAAGCCTCACATTCTTCTGCTATGCTAGTGGAAATGAGAGCACATTCATCCTTCTCCTCCTTGCTGGTTGAGGCAAGAGGACTTTCAGCTTCTG------GGGGCGCACTGGGCATAGGCCCCTCAAAGTCGGCGGTGCTTATCAAGAC---TGGACCTGTAGCCCTTTCTTCCACTGCTGCAGCAACCGGCTGAAGACT---TTCAGCACACTTGATGGTTGTTGCACTGGAGATAGGCAATTCGAATTCTTCCCCTATGCTTGTGGAAATCATGGCACACTCATCTTTCTCTTCACTTCTGCTGGCAGTGAGTTGGCTGTCATC---TCCTGAGACTGCACTGGGCATGGGGGCCTC---------AAATTCTTCTGTGGTTACTCTGGTACCTTCCATATTTTCTTCAGTTCTCAGAGCATCTGAGAGACCTCCTTCCACATCTGTAATTGCGCTTACCTGAGGGGTGTAATCATTTGTGGTACTGGTGGAAATAATCAAAACTTTGCCTTGATTTTTACCCCCTGCTAAGC-----------------TATTCTGGTTGGTAATATCACCACTGGCTGTAGTTGCCATGAGACCATCACACTCTTCATTTTCTACAGAGGTGATGATGTCCTCATCTTCTTTTTCACTTGG-TGATGTGTGA---GCAACTTCACATTCTGGGACTTCACCAGATACAAGAACATCGTAACTACCCCCGACCAGGCCAGTGGAAATAGTGGTATCTTCAACTTTTTCGAGCTGACTGTCACTTTGATCAGATGCAGCACTAGTCATAGGACCCTCACAACCTCCTGGAACTGGTGTCACTTCATCCTTTCCTGAGACTGCACTGGTCACACTGCTTTCTACAATCCCTTTTGCACTGGAGCAGATATCTGTGTCT---TTACTTCCTTTCTCTGTGCCACTCATGCTGTCAACATTATTTTCATTTGCATTCATGATGGCAGCTCCAGCCTCAGCTTCCACATGCTCTACCACAGTAC---CAATCTGACTGTCCCCTTCT---GCACTTTCACAAATCAAGACCCCTTCACTTTCTTCTCCTAACCCTGTACAAGTTGAAGCATGCCCAATTTC---ATTTCCTCTTCCAGTACTAGTCACAACATCCTCCCCTTCCTCGTCTTCCTCTTTTGCGCCTGTGCTAGTCACAATGCCTTCATCATCACAAGGACCAGCAGCAACTAATGGTACATTAGTGCCTTCTTTGGCCACTGTGCTGTCCATTGCACTCTCTCCATTTTCTTCCGATTCAGAACTTATAGCAAAGCCTTCGCTGCTATCTTCTGAACCTGTGCAACTTGCTGGCCCCTCTCCATCTTCT------GTTATCCCCGTGCTGGTGACTGCACTCTCACCTTCTGTACCATCATTCACAGAACCATCTCCTTCTTGGCTGGCACTTGTTCCTGGTGGTGCATCATTATCT---CCCAGGACAACACCTGCACCTGTAACCATGCGTTCCTCCCGGGGCCCTGCTCCAGTTACTGAGCAGATCACAAAGTTATCACTTCTGCCTTCTGCTCCTGTACATGTCACAGTGCCCTCTGTTTCTTTTTTGGGACCCATTCTCATCATATTTCCCTGGGAGCCATCCACCTCTTCACTGCTTATAGATCCTGCTCTTATCTCTGTTCCAGCACTTGTAACTGCTCCATCACTTTCAACTTCACTAATAAAAGTAATAGTTCCTTCAACTATTTCTGAGTCTCTACTTAAAGAACCATCACATTTTTCTTCAGAGCCTGCACTGGTTACAGCATCATCCTTTTCCTCTGTCACAACGCTATTTACATTGGCTTCGATTTTAACTGCATGCACAGCCAGTAGGTCTGCTGCTCTGTCCTCAGATTCAGCCACAGCACACTCCCCACTTTCCCCTTCCTTAGTGCTTGTGAGGAAGGTTTCACTTTCAGCAAATCCCTCTGTGACAACAGCCCCACCTTCTTCAGCTGCAGCAAAAACAGTGCATTCACTGGCTTCTGCACCAACATGAAGAGGATT---------ATTTCTGGAATGTGTTCCTATTATGAGGCCTTCATCTGCCTCAATGCTGGTGCAAGGCAAAGCCACCTCACTTTGTCTTGTTTCTGAAGAAGTGGTTGTGGCAGGCCCAGCCTTCACTGGACTTAAGGTGACATCTTTGTCCTTCCCTTCAGTACTAGTGGCAACAGAAGT---------CTTTTCTGCTCT---CCTAGGCCCAGTTGCCACATCCTCAGTTTGTCCGTTCCTTTGGTGTAAAACAGA--GGGTGCAGAGCCACTTCCAGCACTGGTGTCTACCTCACTGTTTTCATTCCTTCTTTCAACATCAATTGATATGTCTTTTACTTTACCTGG----GCTTCTTTTATGCTTAAGTTTGACAGTTTCAGCATATTTTTCTGTATTCAGGCCTACA-----------------ACATGATCAACAGCA---ATGCCATCCTTCTTGCCATTCTCTACTGTTGCTTTAATTGTCTGCTTTAAATTGGGCTCTGCATTTAAGT-CATTTTCTTTCTTGGCCATGTCCACTAAGCCACCTTCTTTGGTAATATTCTCATTTTCCACAATCACGCCCGTT----AACTTACTTCCAAGAGGCATGATTACCTTTCCTTGTTTACCATCCAATAAAGTAGCCTGGTGAGCTTCTGGAATGTGTCTTTTGCTAGTGATGCTTGCTTTTGCTGGTGTATCTACTGTGAAACCTTCACCACCTTCTTTGCTGTCACTTGTCTTAAGGACTTCTGATTCCC-----TAACAGTCAGACT------------------TTGGTTAGGGAGAGCAGAGTGATCCGCAGGGGAGGTGCTGGCTGTGCTACCTTCCAAAACAGTTCTTTTGTCAAACAGAGGAATTACATCTGGATCATACGATTC--CCTCAGAGGCACAACAGTCACTGAACTTAAGGATGGTG---------AGGAGTCTAAATTTGTGGAATGTTCAAGAGTGGCATCTCCTT------------------GAGCAACATGTTCTTCAGCAG------CTGTGTTTTTCAAATTCTTCTGTACCCTATCATTTTCTGA---------------TGGGGCACTCAGTAACATTCTATGAACAGTTTCAGAATCTATATTCACTTCAGTAGTTCCTCTATGAATGGGTTCTTTCTCCCCAGGGTTCATTTTGGACACAGCACTTTGTATATGCATTTTCTTGGTCAAGGTGCTTCTATGATCGGCATGCTTTTCAGAATTACTATTAACTCCTGTTCCACGGCCTGGCTTATAAGCTGGAGCTGTTGCTTTTGAATCTGCTGTGCAAGTTCTCAATTCATCCTTTTGAACAGTGGCAGAAGTTTTTTGTTTCA---TATTTTCAGAGTCAATGTCTTGCTGAGAATTATTATTGCGGTTGTCTTGGGTTTTAGATACTTCAAACACATTTTCAACACCTGGCTCAGAATCAATTTCCATTGGCTCTTGTTCAGGGATCAATGTCATATCACCACTCTTT---TTTGGTCTCTGAAGGGAGGAACCGCTGGGAG-----TGCTCAAAGTGTTTGCTGCTAATTTTTCTTCTCCTTTGGCCATTTCTTG---TGACAAGCTTCCTCTCCGATTTTCGCA---CAACCTTCTACTTAATTTCTTTTCCATGAGTGAACTATTACCTCTGGCCTTTTCATGACTACTGTCAACTTCTTTACCATCCTTGTCATCTGATTTATT---TTCGTCCTTCTTTTTTATGTCTTTACTACTATGCTTTAAGCTTCTGCTTTTGTGGCCATCT---GACAACTTTCTCTCAAGCCTGGTGGAAGTGGAGTCTTTATCACTCTTATATTTCTCCTTTGCTAAT---------------GGTAACTTGGCTCTATGACTAGAATCCTTCTGTGTACTATGTGCTGAAGAAGAAGCAGTCTCTAATACAGGTTCAACACCAGTTTCTTCAAAAGGTTTGTCTTCAACTTTAGACTTACGCTGTTTTTCTGAGTCATTTTCTTCTGTGTTCTTCTCCTTGTCTGGTTTTGGAGTGGTTGCCTGTTTTGTGGCACCTTCTTGTAATTCTGTTTCTACAACTTTTACCTGTTTGCCTTGAGTTTTTGATTTAGACTTCAACACAAGTTTCTCTTCTAACAAGCTCTTTGTTCGTCGTTTCTCCTTGTGAACAACCTCTTCTGGTTTCAAATTACTATCCATGTTAGTGGAGTCCATATCACACTTATCTTCCGAATAACTTTCACTTCTTCTCTGTAATGTGATACCATGTTGCTT---GGAACCCAGAGAATCTTTCTGAATTTTAGAATCACTT---GACCTTCTTGATTTGTGCTCTGCCTTAGTTTTTTCAGCTGACAAGCGTCTCTCTTTTTTGTTGTTTTCTTTACGAACATTCTCATCTGTTTTTATAATATATTCAGAAACTGGCTTTCCATCTTTGCCTAATACTGATAATTTCCTTTCATTCCTATGTTTACTTTTTCGTTCGGTTTTATCATCTGAAGAAAGCTTTGTTTGTTGACTTTGCTTTTGAATATTTTCCTCTACTTTTAAACCTTTCTCAGAAGAGTGAAGCTCAGTCTCATCACCTGTTTTATGCATACAATCACCTTTATATTTATGTTTCACAGACAATTTGTCTTCCGATGGAGTTTTCTCTCTTTCAGGCTTCTCCTTGGAGGATTTCACCTCTTTCTTAAGTAGGCTTTTCAAATGTGGTGTTTCAGAATC---ATCTTTCTTTAGATGCTTTTCGTTTTTAAGTGTGCTTTTCTGTTTCTGGGGCTCTTCGGTGCAAATTTCTGAGCGTTCTACTTGCCTTTTTACATCTCTTGTGTCAGTCTCTTCCTGTACCCCCTCCATGATAACAGGGGTAGATGTCCGTCTTTTATGTTCTCTTTCTAATTTGGATTCATTTTTGTTTTCGTCAACTACATGCAAAGACTCTGAAAGTCTCCGGGCAGGTTTACTTGGTTCACTTTTTGCATGAACATGCTTCAGCTCCTTTGAAGAAGAAATTTTTTCCTTTTCACAATGCTGAAAGAAAACAAAGGTTAAA chr4 - 94230402 13892778 13892777 13898253 80332150 80332149 80337625 5476 CACTTTTGTCTTTTACTTCTGAACTCTCAGCATCAAGTTGACTTTCTTCTATGACAGTAAATGTGAAGAGA----CTATCACATTCTTCCATTGTGCTCAGAGCGATCACCGCTCCTTCTTCTTTATTTCCTATGCTTGAAGCTGCATCATGATCTTCACTGTTGGTGGCAACCCTCAGCACAGGACCTCCACATTCTCCCACAAATATCACAGAACCTTTGCCTCTTGCATCTGTATTGAAAGCAGCTAGTCCAAACTGCTCATCTACAGTAGCAGTGGTCTCTACAATCTTACATTCCTCTGATGCATTTGGAGA----GATATCCTCT------TCATCTCCCTCTGCTACAAGGAGCTGATCTTCAGTTTGTGGTGCTGCGCTGATCAGGACTATTTCACATTCTTCTGCCATACTTGTGGTGATCACAGCAGCTTCATATCTCCCTTCTGTTTCTGAAGCAGTGAGTTTATTTTCATCTTGTGCAGCTACACTAGACATAGGAGCTTCAAAACATTCTGCTGTACTTGTAGAGATCATTACTGTTTCATTTTTAGACTGTGTTTCTGAGATATCTTGAACTGTCTC---CTCTGTGACCTCACCTGACATCAGGATTACTTGTTCTTCCACAACACTTGTGGAAATCATAGCACACTCATCTTTTTCTTCTTTACTGCTAGCAGCTGAGTGACTTTCATCTCCTCCTGCACTGGATGCACTGGGCATGGGAATGTCATATATTTCTGTACCTATAGAGACCTCTGTACTTTCATTTCTTTCTTTTGTTTTCACAGAGGGGAGCTGACCACTGTATTCAATA------------GTGGCACTAGACATAGGAGCCTCAAATTCTTCTACAATACTAGTGGAAATCATGGTGCATTCATCTTTGTCCTGTTTACTGCTAAAAGCAAGCACACACTCTTTAAATTCTGTAGCTGTGCTGGACATAGGCACCTCTGTGCCTTCAACATCGACTGAGATCA---TAGAGCTTTCCCCACTTTCATTTGCTCTTGCAACGGTAAGTGGACCTTCCTCAGCATCTATAGCTGAATGTAAGGGAGCATCACTTCCTTCCACTGTACTGGTAGAGATGATATCACCTTTA-----ATTTTTTCCTCTCTGTCAGCAGGAATAAAAGAATTCTCATCTCCCTTTGGAATGGCACTACT------------TATAGAGCCATCAAGTTCTCCGCTGCC---ACAGGTCATGGCATTCTCGTGCTCTTCAGCACCAGGCTGACCTCTATCTTGCAGAGTCATAG----------CACTAGTCATGGGGCCTTCACAGTCCTCAGCATCTAAG------GAAATCAAGGTACCTTCATGTTTTTCTA------------------TGCATGCAGC------CACAGCATCCTCATCATC-------------AGCACTT-----------------GCACTGGTTACACTGCTTTCAACTATCCCTTTAGCACTTTTGCAG---TTTGTGCCACAATTAGTTTCTTTCTCTGCATCTGTCATGCTGTCAACAGTAAGCTTATTTATCTTTGTGCCTGCCAGTCCTGACTCAGCTTCCATTTGTTCAGCAACTATGCAGATAATGGAACTTTCACCTTCTTCTGCACCTATACAGATTAGTGTGTTTTCACCTTCTGTTCCT------GTACAAGTAGAAGTATGTTCCATTTCTTCATTTCCTCTTCCAGTACTGGTCACAATGCCCTCACCTTCTTCATCCTCTTCTTTGGAGCCTGTACTAGTCACAAAACCTTCATCATCACAGGGACCAATGCTGACTATAGTGATACTAGCTTCCTCCTTTGTCCCTGTGCTGTCCATTGCACTTTC---ACATTTTTCAGTATCTAAACAAACTGCAAAACCTTCATTGCTGTCTTCTAGTCCCGTACAGACAACTGAAATTTCAGCATCATCTTCTGGAGTTATGCCTGTGCTGGTCACTGTACTTTCACCATTTATAGTATC-CTCACA--------------TTTGTCACCAGTAGTTCCAGTTGTGGTATTGTTATTGGTGACCACTGCAATACATGCCCCACTTACAGAACCTTCTCCATGGGCATCCGTACCAGTTACTGAACACATAATGAAGTTAGGACCTCTTTCTTCTGCACCTGTGCAAGTCACAGTACTTTCGTGTTCTTTTACTTGGCCAGCTCTCAT---ATTGCCCCTAAATTCACGTGAACTGTCACCACTTGTTGATCCTTCACCTGATTCCGTACCTGCACTAGTTACAGCACCATCACTCTCCACTTCACCTAAGCAGGACACAGAACTTTCTAATTTGCCTGCACCTCCACACGTCAAGGTCTTTCGCTTCTCTTCAGAGCCCGCACTAGTTACAGCATCATCTTTTTCTTCTGCTCCAGCACTATTCACACTATCTTCATTTTCTACTCCACTTTCATTGACTGAATCCTTACCACTTTCTTCTGCATCAATCATGGCGTAGTCATCATTTTCTTCTTCTTTTGTACTTGTTAGAAAGCTCTCACTTTCTGCTAATCCTTCAGTGACAACACTGCCACCACCTTCTTCTGCTGCTGTAACTGTACACTCACCAATATCTGTTCCTGTAATGAAACTACTCCCCTCACCGCTTTTTACCCATATGCCTGTTGTGAAACCTTCATCGGCTTCTATGCTTGTGCAGATTAATGCCATCTCACTTT---CTTCTTCTGAGCAAGTGGTTGTAGCATCACTTTTCTTTTCAGAATGTGATG---CACCTTCAACTCTTTCTTCTGTACTAGAGGCCATTACAGTGCTCTCAATCTTTTCTGTGCTAGTCCCTATCACAGTGGCTGAAAC---AGTTTGTACACTGCT-----GTACAACAAACTAAGTTTA---CTGCTTCCTGCACTGGTACCTACAGCACTGCTTTCATTTTTATCTTCTACGCTACTATTCCCTTCTTGCCCAGTAGCTGGAACAGAGTCTTT-------------GACTGCTTCCTCAGGCTCTCTTTTAGAC--GCTAACACAGAGGAAGATTGTATCACATTATAAGTATCACATGTCTCATTCTGTTTCACATTATCCATCATTGTGCTTCTTTCTCCCTTTGTGGAGAAATCTGTATTCAAGCACTCTTTCTTTTTCAGTTTTTTTAGTT------CTTTTGTTGGTA-CATCTTCACAGTCTTCAGTCACACAAGTCTTCAAGCTTTCTTCTTTTATTTTCAACT-CACTTCTTGGAGTGCTTTCTAATTTTGATGCTTTGTCATTATCTTGAATAGGTGAGCCAGCTGCACAGTTTTCCATTGCTTGCTCATCAGGATGGGGTGCCTCATTATCTCTTTCTATATTGCTTGTCTTAGTG--TTGTCATCACCACCTTTCACAATAGAACTCAACACTACACTATCTTCTTGTTTCATGTATACAACCTG------------------TGTTGCACCATTCTTCGAAGCTGCCTCATCTTCAAACAAGGAAGTCCCATCTGAATTATGGCATTCTTCTTTAGATGTACTAGACATACT--ACCCAAAGAATGTGTAAAATCAGAGATATCCATATCCATGGACTTTGGATCAGCAGCATCTTCTCTGAGAGAATTAACTGCTAAAGGAACATTATCTGCATTAGAATTTATCACAGTTTTAAAATTCTTTGGTTTTCTGCTGTCTTCTGAAGTTCGATCCTTACTGGGGGCATTCAGTAAGATTCTATGACTTTTTCCAGATACAACACCCATTTTATAAGCTCCTTCTTTATGGAGTCCTTGATCCACTGATGTTTGTTTGGATAAAGTATCTAAGGCACCAACTTGCTTATTAGGGGT---------ATCTTCTTGTTTATTAG---TTTTATCAACTGCAGCCAGAAACTTTGATTCAGAAGCT------------TCAAGATCTGCCAAGCTGTGTTTTAACTCTTTACTT------ACAGAAGAGATTTTTTCTTTTGCTGTGTATTTGGCATCTGTGGCTTGGACTGAATTCAGAATGCTTTTTCCTCCCACTATAGATTCTTCTTGTACTTTTGTTTCATCTA------AATCAAGTTCCATCATCTCTCCCTCATGACCAGAACACATATCATCACTATTCGTATTTGACTTTTGAGGGA--------CTGGAAGAGAGCTGCTTACAGTTACACCAACTGATTGCTTTTCCTCTCCAAGCAAATTGTGGTTTGATATACTGCCTTTTCTGTTTTCACAGGATACCTTTTTACTTTGTTTTTTGTCCACTGTCACTGTGATGCCCATTACTTTTTCATGTCCACCGTCCATTTCTTTCATATCTTTATCCTCTACTTTGGTACATTCTTCCTTTTTCTTTATTTCCTTGTTGCTGTGCTTTATGCTTCTGCTTTTGTGACCTTCAACAGAGAACTTTCTTTCTAGCTTGGAGTTACTTACATCTTTGTCACCTCTGCATTTCTCTTTTACTGATCCTCTTTCTCCGGAGTGCAACTTAACTCTGTGACTGGAATCTTTTTGTGATCCCTGAGTTGACTGCATTCCACTTTCAAGCTCAAAATCAGCACCACTCTCCTCAGACATTTTATCTTCATTTTTGGAATTGTGTTGTTTATCTGAATCATTCTCTTCCATGTTCTTATCTTTGTCCAGTTTCTGACTAGTATCTTGTTTTGCTAAATTTTCCTGTAATTCTGTTTCAGATGATTTCAATTGTTTACTATGACTCTTTGACTTAGACTTCAATAAAATTTTGTCCTCTGCAAGGCTCTTAGATCTTCGTCTGTCTTTAGGAACACCATCTTCTTGTTTCAAGTTACAGTCAGAGTTAGTTGATTTTATTTCATGTTTTTCTTCTGAGTAACTTTCACTTCTTTTGTGCGATACAGAAGAAAGTGGCTTTGAGGCACTTGTAGAATCCTTCTGTGGCCTAGAATCACTCAGAGACCTTTTGGACTTGTATTCTGCTCTTGATTTTTCTGTTGAGAGGTGTCTGTCTTTT---TTATTTTCCTTACGAAGTAACTCTTCAGCTTTTAAAGTGGAATCAGAAATACCTTTTCCATCTTTTCCAGTTACTGATATTTTCCGTTCACTTCGGTGTTTACTTTTTCTTTCAGATTTGTCATCTGAAGAAATCTTCATTTGTTGATTATGTTTCTGAGCACCATCCTCTCCTTTCAAACTTTTCTCAGAAGAATGGAGTTCAACATCTTCAACTGATTTATGAATACCATCTCCTTTACATTTGTGCTTTAAAGAAAGTTTATCTTCTAATGCTGTTACTTCCTTTTCATTTTTATCTCTGTGAGACTTGGCTTCTTTTCTGGCAGCATTTCTCATATGTTGAATTTCTGCATCACTATCTTTTTTGGGATGTTTTTCATTTTTAAATACGTTTTTCTGCTTCTGTAGTTCATCAGTATTGGCTTCTGCTCTTTCCAGTTGTCTTTTTGGGTCCTTTGTTTCAGTGTCCTGTTGGGTTCCTTCAGTATGAAGAGAGGTGGACGTTTTTCTTTTATGCTCTTTTTCCACTTTAGAATCAGTTTTGTTTTCCTCAGCTGAATATACTGATTCTGAAAGTCTTCTAGGTGGTTTAGAGGTTTCAGTTTTGCCATGGTTATGCTTTAATTCTTTTGAAGAA---------TTTTTTTCACAAGTCTGCAAAA----GAAAGTTAAA ..:x:..x....:.x:...:.x..xxx.....::x:.x..:.:..x::..::-.x..x:xx....:.xx..----.::.::::::.:...x:x.......xx..x.x...x.xx..:xx......:::...:x..x:..:xx.x.x.:xx:..:xx.:.:.x.::.::::x.xx..x:...::..:x.:::::::.:x.:...xxx.:.x:.x..xxxx.::..x:.:x.x....x:...xxx....::..::x.xx..x:....x.x::x:.:::x...:xxxx.:x:x.x.......:x...-...xxx......----.::.x.x..x------..x...x.:::..:x.:::x....:........x::..x:.x:.x..:.::....x....::......::....x.xx:.:.......x:....::..:.:x...:x:x..:....:.:.xx..x::.x.x.:.x.::::...x.....x.x::.x:....:....:x..:x.:...x.::x...::.:.x:..:........x..xx.xx.::.:.:...xxx:.x::.xx...x.x:.x..:.xx.xx.:..---:..x:::..:x....x..x.:x::::::x.x::......::.x.::..x........x.x......:.....:..:..:..:..:...x.x.x:..x:::x........x..:..x------x..::...........:..xx:x...x.xx:xx.x..:.:...x:....---..x..:.x:.x::.......::::.x:::...x::xx:.....xx...---....::.------------..x.....:..x.....x:x:..:........:x.x..:..x.............::..:........x..:.xx:.x.....::x..::..:xx:.xx..x.:---.:...x::...::....:...:..x:....---------..xx..xx...x.:.:.---.:.x:.:....x:.:....x.:x.:...::x.:.:x:x::x:.....:.:..x:.....:..::..x::x..xxx...x:x:::xx:.x.::::x........:..:..:..xxx.x....:-----......x..:.::xx.x...-----------------:..:::xx..x.x...:x...:...------------:..::::......x::...:.::.x:.---.x....x...:::.:...:.x:....:xx...:x..-...:x.x.:x---...:xx...:.x----------...:..x:.:::.:x.x..::.:::x:.xx.:x.:.:.------.....x:x....:.....xx......x.------------------::x.......------..:..x.:.....:x.:.-------------:x.....-----------------........:...........x..x........x.....xxx....---.:....:.x---...x..:.........:::.xx..............x..xx:.:....::x..::..x:x..x:x...x.x...........:x..:..x:.x..x:.:.---:...xx:...x..x......---....:.x:...:..:.:x::x::.....:....x:....------........x....:...::.x.....---..................:.......:::....x.....:..:..:..:.....x.x......:..........x:..............:......:::x::....xx.xx.:.:...:x:.:..:..x.:.x...................:..---.:x..:...x.xx..x:...xx.:x.....:.....::....:......::x..:..:..:x:x:...:xx::..xx....x...------.....x..:........x....:...:.....x.:.:..x:...-:.....--------------..x.:::x..x.x.....x.x..xx.:..::....:x---x...xx:...:..x...x..xx.x..x:x:.x...::.x:...xx:.:.:x...........:..x..x.::......xx..:...x:.......x.....:..x........:.::..xxx.......x:xx.:..x::......---...x...:x::.x:..:x::xx::x....::...:.x......x.x.:.:x:..:..x..x.....x..x..x..x........:..x.......:x.x:x.:.xx.:..xx.:...x.x.x.x:...x::...:..x::xx:.:x:x.:x.::..:...........:.....:..............:.....:....::x..:.:.....:...:.:x....:x...:x...x..:x:x..x:x.x.:::..:x:xx.x..x..:..x.xx...::..::..::.x..x:..:....::....:..x..:.....x..:...x.:........x..x.....:..x.........x:x.....x:....xx....x..x:x...x..:..:....::::x....:x..x::.xx:.:.xx.:.---------::..:.x:xx::.:.x...:..:...::........x..:..x.....x.....::x:..x....:........---:.x:......:x..........:...xxx.:xx:...:x.x.:.:x.:.x.---..:...::x.::.::....x.......x...x.:x:x...---------........:x..---..:x:x.x....x..::x.x.---.......x.::.x..-----...x....:.--::..x:.---.::.....x........::....xx.....:.......::.x::...x..:::.x.xxx:x:x....x:x.xx..x....----.xx.....-------------...x.:...xx..x::.:.::.x..xx.--..:x...-----------------....x..x.::.x..---:.x:...:..x:..xx....x..:.:::...:x:.xx..x:::x....:x:xx.::x....:...:...:-.x:.......:.::.::x.x.:x::.------.:..:x......-:..::...:xx..:x..:....:.xx..:----.:...x....:xxx.xx:x::.:.-.x:...:.x.xx.:.:x..:...xxx.xx..:.x..x.x:x...x....:x..xxx:::x:x.::xx.:..x.:x.....x.:x:...x:xxxx.::xx.:...::.:..::..:xx.:.::.........:x.--..x.x..:x..-----.x...:.x::...------------------...x..x:x.x:x:..:xx..------------------x.:..::.:.:::.:.:..:.x.::::x.:x.......::.:.:.:x......:..:..:xx....--.:.:...x.:..x.x.xx:...--..::..:..xx...---------..:x:..:.x..:::....x.x.xx.xx..::......:..:------------------:..x.....xx...x..x:..------:::::x....x........:x..x::..::::.:......---------------x......:.......x.........x:xx..:....xx.x.:.::..:..:.xx..:....::x.x.xx.:..:...xx...x.x.:xx.:xx......:.x..:.::.x:x::.:xx.:..x...:x.x::...---------...xx.x..:..x.:..---.x:...:....x.x.::xx.x:x::..::.:.x.....------------.:x::......::x..x:xx.:.:..:..x.:x:..------:::.x...::......x...::---.:.x..::.x:..x:..x....xxxx.....xxx.x...xx..x:..:xx::.x.....x....xx::..x...x:xx..:..:------......x......::x....:x:...x.:x:x:.xxx.......:....x..:---....:::.:...:..:--------....:..-----....:.x...xx:xx.x:..:...x:.:...::..::::x..xx.:x..---...:.x:..x...:.:.x:.....:..---:.x.:..:.....x:...:..x....:x:x::xxx.:x.:..:x.x:.:........x.:..:...x.:......xx:...:..:..x...:x...:x.---...x.....:..:.....x..:..::.:..:.......x...............:..x..x---..x........:..x...:...x.xx.x.x:x:.....:....:::.::.......:...:..:..---------------x.:.....::....:.....:.....:..:....xx.:x..x.:...xx:x:xxx..x.:..x.::x..::x...:.....x.:..:...:.x:x...:......x:...:..x..::.:.....x.....:.....:.....::.......x..:.....::....:x..x.:..xx.:.......:x:x.::...:..............x:xx:x...:.x:.....:.:x...x.:.....:...........:.x..x...x..:...:xx.:......x.x..x....:.x..:..:x.....x.x......x.......:....x:..x:x......x..x.::..x...:::..x.....:..:...............:.x..::..::::x.xx.x..x....---..x..:::x......:.....x:x::........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52M1I18M4D229M1I12M4D10M6D254M3D116M6I49M3I48M3I7M12D104M3I30M9I17M3D122M5D20M17I25M12D27M3D36M1I10M3I12M10D38M6D28M18D10M6D18M13D7M17D45M3D9M3I100M3I20M3I39M6D26M3I156M3D85M6I44M1D6M14D37M3I146M3D426M9I74M3D51M3D40M9I12M3I21M3D15M5D10M2I7M3D80M4I8M13D28M2D7M17I15M3I70M1I26M6D12M1D29M4I24M1D134M2D11M5I13M18I21M18D66M2I22M2D14M9I42M18I21M6I40M15I135M9D17M3D38M12D36M6D22M3I84M6D53M3I16M8D7M5I49M3I27M3I99M3I61M3I66M15I413M3I37M3I57M3D356M3I280M9D22M4D10M 3247/5236 62.0% 5476/94230402 0.0% 514/5236 9.8% -293181 -93937221 +7615 chr4 + 190214555 13599976 13599975 13600644 669 AGCACCAATCATGACTGCTTCACACCCTTCAGAGGTGCTTGTGGAAATCATGGCGGTGTCACCCATCTCTTCCGCTGGTGTGACTGAGGGGTCGCCTTCCTCTTGAGGGACAGCACTGGACACTGGGCCCTCACAGTCTTCCACCGAGCTCGTAGAGATGATGCCACTCCCGTCTTTTTCTTCCATGACTGTGCCAGCTCGCTCATTTTCACTTTCAACAACTACACCGGAAACAGAAGCCTCACATTCTTCTGCTATGCTAGTGGAAATGAGAGCACATTCATCCTTCTCCTCCTTGCTGGTTGAGGCAAGAGGACTTTCAGCTTCTGGGGGCGCACTGGGCATAGGCCCCTCAAAGTCGGCGGTGCTTAT-CAAGACT----GGACCTGTAGCCC-----TTTCTTCCACTGCTGCAGCAACCGGCTGAA-GACTTTCAGCACACTTGATGGTTGTTGCACTGGAGATAGGCAATTCGAATTCTTCCCCTATGCTTGTGGAAATCATGGCACACTCATCTTTCTCTTCACTTCTGCTGGCAGTGAGTTGGCTGTCATCTCCTGAGACTGCACTGGGCATGGGGGCCTCAAATTCTTCT---------GTGGTTACTCTGGTAC---CTTCCATATTTTCTTCAGTTCTCAGAGCATCTGAGAGACCTCCTTCCACATCTGTAATTGCGCT chr4 - 94230402 13893046 13893045 13893708 80336695 80336694 80337357 663 AGCAGTGGTCTCTACAATCTTACATTCCTCTGATGCATTTGGAGAGAT------------ATCCTCTTCATCTCCCTCTGCTACAAGGAGCTGATCTTCAGTTTGTGGTGCTGCGCTGATCAGGACTATTTCACATTCTTCTGCCATACTTGTGGTGATCACAGCAGCTTCATATCTCCCTTCTGTTTCTGAAGCAGTGAGTTTATTTTCATCTTGTGCAGCTACACTAGACATAGGAGCTTCAAAACATTCTGCTGTACTTGTAGAGATCATTACTGTTTCATTTTTAGACTGTGTTTC---TGAGATATCTTGAACTGTCTCCTCTGTGACCTCACCTGACAT--------CAGGATTACTTGTTCTTCCACAACACTTGTGGAAATCATAGCACACTCATCTTTTTCTTCTTTACTGCTAGCAGCTGAGTGACTTTCATCTCCTCCTGCACTGGATGCACTGGGCATGGGAATGTCATATATTTC---TGTACCTATAGAGACCTCTGTACTTTCATTTCTTTCTTTTGTTTTCACAGAGGGGAGCTGACCACTGTATTCAATAGTGGCACTAGACATAGGAGCCTCAAATTCTTCTACAATACTAGTGGAAATCATGGTGCATTCATCTTTGTCCTGTTTACTGCTAAAAGCA---AGCACACACTCTTTAAATTCTGTAGCTGTGCT ....x:::..x:x..x:::.:...::.:..x..x.:::...x:..:..------------.:..x::..x..:x.:xx..:x..x::.:.x.x::....xx:...x..x:.x..:...:x..xx:xxx::.....x.....::..:x:..:..:.x...x.::x..x:::.:.x.:.::....::.xx...x:x...:xx.:.:.......::..xx:..:......::..x.:..:...:...x.x:x.......:.:..x..:..:..x.xx:.xxx.....::..xxx..x:x.x::---....::.xxxx..x:.x:xx.:....x.:x.x...:x.:...--------..:::.::x:x..x...x:-...x...----.:.x:::....x.-----.:.:..:.x::x:.:.x..x.x.:.....:-........x.x.x:::x:::x.x.x........:x..:..x.xx..:x..x:...---.:.:.:.:.:..:.:.x:x.:..x:....:.:.:....:xx..:.xx::.x:.x...:..:.:::::.x.:.x:x:::x.....:.:...:..:...............---------....xx.::x....:.---.x..:x.:.::.x..:.x.x..x.:....---::x.x..x::...:x.xx......::..:... 48M12D240M3D42M8D19M1I7M4I13M5I30M1I55M3D109M9I16M3I29M3D32M 352/640 55.0% 663/94230402 0.0% 52/640 8.1% -293070 -93937332 +13335 chr4 + 190214555 13600217 13600216 13602166 1950 TCACATTCTTCTGCTATGCTAGTGGAAATGAGAGCACATTCATCCTTCTCCTCCTTGCTGGTTGAGGCAAGAGGACTTTCAGCTTCTGGGGGCGCACTGGGCATAGGCCCCTCAAAG---TCGGCGGTGCTTATCAAGACTGGACCTGTAGCCCTTTCTTCCACTGCTGCAGCAACCGGCTGAAGACTTTCAGCACACTTGATGGTTGTTGCACTGGAGATAGGCAATTCGAATTCTTCCCCTATGCTTGTGGAAATCATGGCACACTCATCTTTCTCTTCACTTCTGCTGGCAGTGAGTTGGCTGTCATCTCCTGA------GACTGCACTGGGCATGGGGGCCTCAAATTCTTCTGTGGTTA-------CTCTGGTACCTTCCATATTTTCTTCAGTTCTCAGAGCATCTGAGAGACCTCCTTCCACA-TCTGTAATTGCGCTTACCTGAGGGGTGTAA---TCATTTGTGGTACTGGTGGAAATAATCAAAACTTTGCCTTGATTTTTACCCC-----CTGCTAA------------GCTATTCTGGTTGGTAATATCACCACTGGCTGTAGTTGCCATGAGACCATCACACTCTTCATTTTCTACAGAGGTGAT---GATGTCCTCATCTTCTTTTTCACTTGGTGATGTGTGAGCAACTTCACATTCTGGGACTTCACCAGA---TACAAGAACATCGTAACTACCCCCGACCAGGCCAGTGGAAATAGTGGTATCTTCAACTTTTT------------------------------------------------------------------------------------------------------------------CGAGCTGACTGTCACTTTGATCAGATGCAGCACTAGTCATAGGACCCTCACAACCTCC---------TGGAACTGGTGTCACTTCATCCTTTCCTGAGACTGCACTGGTCACACTGCTTTCTACAATCCCTTTTGCACTGGAGCAGATATCTGTGTCTTTACTTCCTTTCTCTGTGCCACTCATGC------TGTCAACATTATTTTCATT---TGCAT---TCATGATGGCAGCTCCAGCCTCA---------GCTTCCACATGCTCTACCACAGTACCAATCTGACTGTCCCCTTCTGCACTTTCACAAATCAAGACCCCTTCACTTTCTTCTCCTAACCCTGTACAAGTTGAAGCATGCCCAATTTCATTTCCTCTTCCAGTACTAGTCACAACATCCTCCCCTTCCTCGTCTTCCTCTTTTGCGCCTGTGCTAGTCACAATGCCTTCATCATCACAAGGACCAGCAGCAACTAATGGTACATTAGTGCCTTCTTTGGCCACTGTGCTGTCCATTGCACTCTCTCCATTTTCTTCCGATTCAGAACTTATAGCAAAGCCTTCGCTGCTATCTTCTGAACCTGTGC-AACT-------TGCTGGCCCCTCTCCATCTTCTGTTATCCCCGTGCTGGTGACTGCACTCTCACCTTCTGTACCATC------ATTCACAGAACCATC------TCCTTCTTGGCTGGCACTTGTTCCTGGTGGTGCATCATTATCTCCCAGGACAACACCTGCACCTGTAACCATGCGTTCCTC-----CCGGGGCCCTGCTCCAGTTACTGAGCAGATCACAAAGT--TATCACTTCTGCCTTCTGCTCCTGTACATGTCACAGTGCCCTCTGTTTCTTTTTTGGGACCCATTCTCAT---------CATATTTCCCTGGGAGCCATCCACCTCTTCACTGCTTATAGATCCTGCTCTTATCTCTGTTCCAGCACTTGTAACTGCTCCATCACTT--TCAACTTCACTAATAAAAGTAATAGTTCCTTCAACTATTTCTGA---GTCTCTACTTAAAGAACCATCACATTTTTCTTCAGAGCCTGCACTGGTTACAGCATCATCCTTTTCCTCTGTCACAACGCTATTTACATTGGCTTCGATTTTAACTGCA--TGCACA-GCCAGTAGGTCTGCTGCTCTGTCCTCAGATTC------AGCCACAGCACACTCCCCACTTTCCCCTTCCTTAGTGCTTGTGAGGAAGGTTTCACTTTCAGCAAATCCCTCTGTGACAACAGCCCCACCTTCTTCAGCTGCAGCAAAAACAGTGCATTCACTGGCTTCT chr4 - 94230402 13893164 13893163 13895158 80335245 80335244 80337239 1995 TCACATTCTTCTGCCATACTTGTGGTGATCACAGCAGCTTCATATCTCCCTTCTGTTTCTGAAGCAGTGAGTTTATTTTCATCTTGTGCAGCTACACTAGACATAGGAGCTTCAAAACATTCTGCTGTACTTGTAGAGATCATTACTGTTTCATTTTTAGACTGTGTTTCTGAGAT---------ATCTTGAACTGTCTCCTCTGTGACCTCACCTGACATCAGGATTACTTGTTCTTCCACAACACTTGTGGAAATCATAGCACACTCATCTTTTTCTTCTTTACTGCTAGCAGCTGAGTGACTTTCATCTCCTCCTGCACTGGATGCACTGGGCATGGGAATGTCATATATTTCTGTACCTATAGAGACCTCT-GTACTTTCATTTCTTTCTTTTGTTTTCACAGA----GGGGAGCTGACCACTGTATTCAATAGTGGCACTAGACATAGGAGCCTCAAATTCTTCTACAATACTAGTGGAAATCATGG------TGCATTCATCTTTGTCCTGTTTACTGCTAAAAGCAAGCACACACTCTTTAAATT-----------CTGTAGCTGTGCTGGACATAGGCACCTCTGTGCCTTCAACATCGACTGAGATCATAGAGCTTTCCCCACTTTCATTTGCTCTTGCAACGGTAAGTGGACCTTC---CTCAGCATCTATAGCTGAATGTAAGGGAGCATC---ACTTCCTTCCACTGTACTGGTAGAGATGATATCACCTTTAATTTTTTCCTCTCTGTCAGCAGGAATAAAAGAATTCTCATCTCCCTTTGGAATGGCACTACTTATAGAGCCATCAAGTTCTCCGCTGCCACAGGTCATGGCATTCTCGTGCTCTTCAGCACCAGGCTGACCTCTATCTTGCAGAGTCATAGCACTAGTCATGGGGCCTTCACAGTCCTCAGCATCTAAGGAAATCAAGGTACCTTCATGTTTTTCTATGCATGCA---GCCACAGCATCCTCATCATCAGCACTTGCACTGG------TTACACTGCTTTCA---ACTATCCCTTTAGCACTTTTGCAGTTTGTGCCACAATTAGTTTCTTTCTCTGCATCTGTCATGCTGTCAACAGTAAGCTTATTTATCTTTGTGCCTGCCAGTCCTGACTCAGCTTCCATTTG---------TTCAGCAACTATGCAGATAATGGAACTTTCACCTTCTTCTGC---ACCTATACAGATTAGTGTGT------TTTCACCTTCTGTTCCTGTACAAGTAGAAGTATGTTCCATTTCTTCAT-TTCCTCTT-----CCAGTACTGGTCACAATGCCCTCA---------------------------------------CCTTCTTCATCC---------------------------TCTTCTTTGGAGCCTGTACTAGTCACAAAACCTTC---ATCATCACAGGGACCAATGCTGACTATAGTGATACTAGCT--------TCCTCCTTTGTCCCTGTGCTGTCCATTGCACTTTCACATTTTTCAGTATCTAAACAAACTGCAAAACCTTCATTGCTGTCTTCTAGTCCCGTACAGACAACTGAAATTTCAGCATCATCTTCTGGAGTTATGCCTGTGCTGGTCACTGTACTTTCACCATTTATAGTATCCTCACATTTGTCACC-AGTAGTTCCAGTTGTGGTATTGTTATTGGTGACCACTGCAATACATGCCCCACTTACAGAACCTTCTCCATGGGCATCCGTACCAGTTACTGAACACATAAT------GAAGTTAG-GACCTCTTT-----------CTTCTGCACCTGTGCAAGTCACAGTACTTTCG--TGTTCTTTTACTTGGCCAGCTC------------TCATATTGCCCCTAAATTCACGTGAACTGTCACCACTTGTTGATCCTTCAC---CTGATTCCGTACCTGCACTAGTTACAGCACCATCACTCTCCACTTCACCTAAGCAGGACACAGAACTTTCTAATTTGCCTGCACCTCCACACGTCA--AGGTCTTTCGCT-TCTCTTCAGAGCCCGCACTAGTTACAGCA---TCATCTTTTTCTTCTGCTCCAGCACTATTCACACTATCTTCATTTTCTACTCCACTTTCATTGACTGAATCCTTACCACTTTCTTCTGCATCAATCATGGCGTAGTCATCATTTTCT ..............:..:..x....x:..x.x....xx.....x::..:.:..:x.x::x.xx.x:.::..xxx.:.....x...x..x:.x::....:.:......xx.:.....:---..x..x..:...:.x:...:::xxx....xx.x:...:xxx.xx..:.x.x.x:.:---------.::..x.:.xxx..:xx:x..x:::x...:x..x..x:.x.x.x.xx:.......x.x.::..............:..............:.....x:.x.....:....:x::x..:..x.........xx------.:x...............:::x...x..x:......:x:..-------....-....:...xx.x:......:x...:...x..x----.:.:::.:xx.:x.:::.-..x:..:.x..:..x:x.xx...:.:x.x.---..x.:.::::....:........x..x:------...x..x..:...::..:-----.......------------:..x..:x::..-----------.xx.:.....:x.x.x...::.xx.x..xxxx:.....x:x..x..x...:.x..---.x.x...:..::...x...x.x....xx:xx..:x.x.x.x....---:..x.x:x..x:.x.x..---..x::..:....---...x..::.x..::x:.::..:..:..::.:x:.:...:..:.....------------------------------------------------------------------------------------------------------------------.::......:x::.::...xxx..x:::............:..:..:.....::.::.---------x.:..::::x..xx......x:...:..:x.xx....---.:....x:::::..xx..x:xx.x:.........------.xx.xx..::..:.---x..x..:..x.:x....:x...------..:..xx....x....x..---.....---.....x..x..:.xx:.:x..:.---------.:x:.::.xx.::..:x.x...:x:.x..:..---------...x...x:.x::..:..x.x.:xx.:.....:.......x.---x...:....::..::x.::.------.....::.:..x....x....x...x:x.::..x:...x:...:..:.-........-----..x..:..:...........:...---------------------------------------.......::x..---------------------------.:.....:x..x:.x.x...x:.x:....:.....---:::...x:xx.:...x:...-:...-------.:..:..:--------..:..:x..:....:......x:x.:......:....x..:.x:.x:...------.x:::..:....x..------x:.....x.x.:x.:..xx::xx...:x:x.x..x...:....:.::.:::x.::....::.:x..x..::.:.x...x:.-----:x.x:x..:::.x::x..:..:-..:..x..xx:xx..--...:::.x:..x:xx.::..x.x:......:.x..x.xx.xxxxx:....::x.x..x.:..:.x.:x:.---------....x.------.:..::.x-x.......:-----------x.:....x.:.:.x:xx..:x...:....x::--..:..:x.:....--:..:..:------------.x...x.x..:::..x.x:x:x...---...x.:....:xx..x..x....---:.xx...x.x:........:.........:....x:.:...x..x:xx.x.x..x:xx:...xx:x:...x.x...:x.....--.x....-.:..--......x::...-.x..:.....x:.------..::......---..x:.x:....::..x.:::..::..xx.x.x:xx:x:....:....x:.xxxx.::..xx....x:x.x..::...x::...xx.....x...xx.::.:.:.x...:::x:.... 117M3I56M9D132M6I41M7I4M1D32M4D18M1I30M3I28M6D18M5I7M12I12M11D55M3I45M3D18M3I12M3D47M114I58M9I37M3D34M6D14M3D22M6I19M3I5M3I23M9I32M9D42M3D20M6D48M1D8M5D24M39D12M27D35M3D20M1I4M7I8M8D50M6I15M6I81M5I22M1D15M2I70M9I6M6D8M1D9M11D32M2D13M2I7M12D25M3I23M3D83M2I6M1I4M2D12M1D13M6I10M3D117M 1055/1758 60.0% 1995/94230402 0.0% 429/1758 24.4% -292947 -93937455 +8746 chr4 + 190214555 13608510 13608509 13608729 220 TGACCAGATAAAATATGTACCTTGAATCTTTTTTTCTCTTTTTGCTTAAGGCTACTTTTTTTTCTAAAACTTTCCGTTCTTTAAGGACTTCTTTAATTCTG------GCGGCTTTAGGTTCCAAACTCTTTGTTGATGATTCTTCTAAGTCCACACTACTCCTGCCTAGAA---AAGAAGCAATCAATAAAACGTATTTCAGAAAAGTTTTACAAACAATGTAATATTA chr4 - 94230402 13900198 13900197 13900423 80329980 80329979 80330205 226 TGACTAAATACA-CAAATACCTTGAATCTCTTTTCCTTTTTCTGCTCAAGGCTACTTTTTTTTCTAAGAATTTCTGTTCTTTAAGCACATCCTTAATGCTGGTACCAGTAGCTTTTGACTCAAGACTTCTTGCTGATGGTTCTTCCAAATTCAAGCCACTTTTTCCTGAAACATAATACACAAATAGTGAAA--TAATTCACTATGTCTTTATAGCTAAAGCAGTAATA ....:.:...x.-:.x:............:....:..:...:....:....................:.x....:..........x..x..:.....x...------.::.....x.::..x.:...::...:.....:......:..:.:..x:.:...::.x...::..---..x.x:...x:.:.:...--..x....xx.x:x:....:.:x:..x.:.:..x.. 12M1D88M6I64M3I18M2D35M 155/217 71.4% 226/94230402 0.0% 12/217 5.5% -291688 -93938714 +8094 chr4 + 190214555 13609240 13609239 13609420 181 AGAAAATAATGAAATATATGAGATAGTTTAAAATATTAAAAGTTGACATCTATACCTTGACCCTTGGTTTTTGAAGACTTTGTCTTTTCTGC---TTTCTGTTTTCGTTTTTCTTCAAGTTTTTCTCTATTGATTTGCCTTCTTAAAAGCCTCTCTTCTTTTTCTTTGGCCTAAAACCACAAAA chr4 - 94230402 13901175 13901174 13901354 80329049 80329048 80329228 180 aaaaaaaaaagaaaagaaaagaaaagGTTAAAATATTCACACCT----TTAGCATTTTGACTTCCACTTTTCAGAGACTTTGTTTTTTCTGCAGTTTTCTGTTTACGTTTCTCTTCAAGTCTCTCTCTATTCATTCGTCTTCTTAGGAGTCTCTCTTCTTTTTCTTTGGCCTGGAGGTACACAA .:....x..x....x:x.x:::.x..x..........x.x.x:.----.:x::.::.....:::::x....:::.........:........---.........x.....:.........:.:........x...:.:.......::..:......................::.:x:...x.. 44M4D44M3I89M 129/177 72.9% 180/94230402 0.0% 7/177 4.0% -291935 -93938467 +9473 chr4 + 190214555 13610910 13610909 13611116 207 AATAACAGAACAAACTGGACTTACAATGGACTGTCGTCGTTGTTCTACAGTAAGCTCATCATCAGAATCACTATAGTATTTTGAGTAAAGATATGGTTTGTGGACATACGCATGCCGTACACTTTTTGTTTTTCCTTCACTAGAATCACTAGTTTGAGTTTTTGTTTTATTCTGTTTGTTCTTCTCTTCATCTGTAAGAAAGTTAAT chr4 - 94230402 13902560 13902559 13902760 80327643 80327642 80327843 201 AGTAACAGAAC---TCAAACTTACAATGGACTGACGACGTTGCTCTACAGTTCGTTCATCATCAGAATCACTGAAGTATTTGGAGTACAAAAAAGGCTTACGAACATAAGCATGACGAACCGGCTTGGCTCTCCCATCACTCAGTTCATTAGTATGAGGCTTTGTCTTATTTTTGTTTTTTTCCTCTTCATCTG---AAAAGTTAGT .:.........---::::...............x..x.....:........xx.:.................:x.......x.....x.:.x.x..:..::.:.....x.....x..x..xxx:..x.:.:.:..x.....x::x...:....x....x:.....:.....:.xx..x..:.:...........---:.......:. 11M3D180M3D10M 150/201 74.6% 201/94230402 0.0% 6/201 3.0% -291650 -93938752 +25797 chr4 + 190214555 13613490 13613489 13614826 1337 ATTATTATGTAAAATGCTTTACCATCTGACGTAATCTCTCCTTCTTCCATGCTATCAGACGTTACAACTTCCTCCTCAGTATCTTCTTCAAAAGATGAAAGGTCACTGGTATGAACAGAGCTAACTGTGATGTCTGTAAGTCCATCCACATCAGAATCTATCAAAGAGAAATCTT--CAAGCGGAAAATAAAACACAGAAAAAAAAATCATCTTAT-TATAAGAA------CATACTCAGAGCTCAATTACTAAATTACACTTAAAATTTTCTGCTTTAAATACGTGTCAAACTATCAA--ACAAGGCAGAGTGGTTTCCAGAAAATACAAAGGCAAAGTAGACTTCTGTAAAAATAACT-AAACTATTAATTTATAATGTATGATATAATAATAAAATGAATTTTAAGTAACTGAAGTATTTACTACCTAA--TAAAAATTAGGATATCCAACTATGAACTAAGTTGCTTAAAATAATGTATGTGAATAAATTATAAGACAAATTATAAATTAATAACTTCTGTTAATTTACTCTGTGAACAGATATATGAGTACACAAAAATACAAATATTTATTGCTTTTTTTCTTAAGCAAAGGGGATATAAGTTTCCAAAAGTATT---AAATAAACTTATTAAAATATGAAGGCAAATTTGATACTTCCCTGATCCCAAAACACTCTGTTCTTTAAACTTTGTAGATGTTTGCAAGTTTTTATATACCTTCTTTTGTCCCTTCAACAGTTTTAGCTTTATTACTGTTCTTTTCTGAAGGAAGTTTTAAACTCTCTACTTCTTTTTCCTTTGCTTGTTTTTCATCTTTAACTTTCTGTGTATCTTCACTCTTTTTTGAGTGATCAAATTTCTTTTCAGTCTTTTCCTTCTTTTCTTTCTTTCTTTCTCCTTTCTCATTGCTGTCTGGCTTCTTTTCACCTTTGTCTGTTGATTTATTTTTTTGCTCACTGCTTTCCTGTTGAACATCCTTATTT--------------AGCAGAATTAAATTATTATGCTCTTTTGTGTAATTTTTAATTTCTTCGACTGGACAGGGGAGGTCGCTGAACTCTTCAGACTTTGGGGCTGTTTCCAGTCCTTCACCTCCAGAGTCAGCTGTAGATTTTTCTTTATCAGCCATGTCCTCTGAAGTTCTTTCTTTGTCAGTACTAGTATCAGTGGTTGGCTGAGATGGAAGTTTTTTTGACGCTCTCTCACTGGTCTTGGCATTTGATGTTTCTGTTGAAGCCCTAGCAGCACTGGCTTCTTGGTTAAGAGAAGTTATGGTTTCCAATATCGACATGGCATCATTGGCTACATTAGCACTGGGCCCAGGAGTAGGAACACCTTAAAGAAAAACAGA chr4 - 94230402 13903962 13903961 13905137 80325266 80325265 80326441 1176 ATTAACAATTTAATTGGTTTACCATCTGATGTGATCTCCCCCTCTTCAGTACTGTCAGAAATCACAGGTTCTTCTTCACTTTCCTCTTCAAAGGAAGAAAGGTCACTAGTATGGACAGAGCTGACAGTGATGTCACTGAGTACGTCCGTATCTGAATCTAGTGATGTATGCTCTTGCCAAGGAGAAAAAGAGAGAAGTTGTAATACAGCACATTGTATTTGAGAAACTTTTCTTACAAAAAAAAAAGTTATTTTA--ACACTGAAAA---------------------CAAAGTCTTAAGAATAAGAAATAGC---------AAAAGGAAAAAAAAAAAAAGATTTC------AACACCTTAAACTGCTGAGTGGGAAC-TCTGAGATCTTGTTGGAATAA----CAGATGACCAGAGAGGCACACACCTGAATCAAAGATCTACATGTCCTGAT--------------------TCATGTACCTCAGCGAA--AGGAGATGAGCTGTGAGCTAAG-------------------TGTGGCTAG-TGTGTGAGAACT---------------------------------AGCAGAAAAGATAC--GCTCCCACAAACATTTTTAATTCAGCTCCTGAATACAC---------TTTAACACATCCATATTTTAAGAA----------------------AGAGTGTTGCCCATATC---ATACCTTCTTTAGTACTTTCAGATACTTTATGTTTATTGCTATTTTTTTCTGGAACTAACTGT---TTCACTGGTTCTGACTCTTTCACTTGTTTCTCTTCTTTTGACTTAGTAGTATCATCACttttctt---------------cttatcaagtttttctttcttttcttttctcctatcacctt------------ctggtttcttttcacatttatctattaatttactcttctgatcctcactatcctgttgtatttctttacttGTATCTTTAATTGTAACAGA--TGAACTACTGGTATCCTTTGCTGAATTTTTTATTTCTTCACTTTGGCAAGGAAGCTCATTTGAATCTTCACACTTCACAAACATTTCAGCTCCTTCTCCAGAAAGATCAGAAATTGCTTTCTCTTTATCTGGCAAGTCTTCCATGTTTCTCTCT------GTGCTACCATCAACACTCTGCTGAGATAACAGTCTTTTTGCAGCTTTGTCACTGTTCTTGGAACTTGAATTATCTGTTGAAGCCCTGGCAGCACTTGCTTCTTGGTTCAGAGAAGTTATTGTTTCCAAAATGGACATTGCATCACTAGCTACATTACCACTAGGAGCTGTAGTAGATACACCTTGAACAGGAAGAAA ....x:.xx.x..x..x............:..:.....:..:.....x:.:..:.....x:.:...:x...:..:...x.x..:........:..x...........:.....:........:..x........xx.:...x.:...::...x.......x::.x.x:x:x....--....x:.....x:.:.x.x:xx:x..x.x.x..:x..:.-.x.:....------.x...xx.:.:xxx.:...:.xx.--.....x....---------------------....x.x.:..--.:...:x.x..:---------....x:x...::x...:x...:...------..:.x..-.....::.:.x.x:x..:-.x...x..xx.:x.::...:.----:.::.:..:::..x:x:xxx:....:.--:...:..:x:x..:...x:x.--------------------.x.....:x.x.:::..--.x:...::.::.:.:.::...x-------------------....:x:..-.:.:....x..x---------------------------------....:.:::....:--.:.:...x..::...---..x.x.:..:x.x..x.:.:---------...:.:..x...x.:x.::x.:..----------------------...xxx....xx:.x.:---...........x..x.:....:xx::....xx......:..:..:.......:.:xx.::.x.---:..x..:x....xx:..:..::.......:..x.....x:x:..xxxx.....x.....:..:..---------------...x...:x:.....:...........::.:..x..x....------------....:..........x...:...:..:.....:.:..:..x..x:::..x........x.:x..:...:..--------------.:....--.:..:..:.:xxx..:....:xx.......x........:x:.x.:..:..:..x..::.x:.x......x....::x::x::....x:x......x..xxx.:::....xx:.x.x...:........x.x..x...:..::x:x....:...------..:...x:....:::x.:x........::x...:......xx...:.x......x......x.:....xx.x..............:........x...........x...........x........x..x.....x......:.:.........x....:..xx.x.x.....:x.......:..x.::..x.:. 175M2I39M1I8M6I24M2D10M21D11M2I12M9D25M6D7M1I18M1D21M4D27M2I21M20D17M2D22M19D9M1D12M33D14M2D15M3I20M9D24M22D17M3D63M3D65M15D41M12D71M14I6M2D154M6D197M 761/1145 66.5% 1176/94230402 0.0% 223/1145 19.5% -290472 -93939930 +12765 chr4 + 190214555 13615299 13615298 13615510 212 AAAAGCAAAGCACCTTGTGTAATAAGGGAAGTGTCTGGTTTCTCATCATCGGGAGCTGTGTTGCCACTTCCTTCCTCTTTGTGATTTAGCGTGGCCAAAAACTCATGCACAGCTTTCTCTACCTGAGGTCTGAATGTGTGGTTGATCTTTGGGTCCACAACCTGAGAAATAATTCGGTCAATACCAGACTCCAACATTCCTGATCTGAAACA chr4 - 94230402 13906240 13906239 13906451 80323952 80323951 80324163 212 AGAGGTAGAATACCTTGCACTGCAACAGATGCATCCATTTTCTCCTCACTAGGAGCTGTACTGGGGCCTGCCTCTTCTTTGTGATTCAGTGTTGCTAAAAATTCATGGACAGCTTTTTCCACCTGAGGTCTGAATGTGTGGTTGATCTTTGGATCCACAACCTGAGAAATAATTCTGTCAATTCCAGATTCCAGCATTCCAGACCTGGAACA .:.:.:.:.::......:::x::..x:..x.::..::x......x...:::........::..xx:.:.x.:..:...........:..:..x..:.....:.....x........:..:................................:......................x......x.....:....:......x..:...:.... 212M 163/212 76.9% 212/94230402 0.0% 0/212 0.0% -290941 -93939461 +10018 chr4 + 190214555 13619937 13619936 13620087 151 ACTTACTTGAGGACTTGTTGTCTAATGTTGTTTCTTAGCTGGTTCTTATTGAGATGCGGACTCCATGTGTGAGTTGCCAAGTGATTTGCAACAAAGTTGTCAACACGCTGTCTCAGATTCTGATACGCAGGCTAGAGAGAAAAAAACGAAG chr4 - 94230402 13907620 13907619 13907768 80322635 80322634 80322783 149 ACTTACTTGAGAACCTGCTGCCTAATGTTATTTCTCAGCTGGTTCTTGTTGAGATGAGGGCTCCAGGTATGAGTGGCCAAATGGTTGCAAACAAAGTTATCAACACGCTGTCTCAAATTCTGATAGGCAGGCT--GAGGAAAAAAACAAAG ...........:..:..:..:........:.....:...........:........x..:.....x..:.....x.....:..:..xxx.........:................:.........x.......--:::.........:... 133M2D16M 125/149 83.9% 149/94230402 0.0% 2/149 1.3% -287683 -93942719 +14010 chr4 + 190214555 13627315 13627314 13627757 443 GCAGACCCCCAAACCCGGCGCGCTCCT-----AACCTTGGTGTCCACGTCGGCCAGGCAGTCTCTGCGGAACTGGTCGAAGAGCCCCTGGCTCTTGAGGTGGTTCACGATCATGGCCACGAGCTGCGGGTCCCCGGCGCCCGCACCCGCGCCGCCCGCCCCGCCCGCGCCGGGGCCAGCCCCGGGGCCCGGCGGCGGCGGCGGTGGCTGCGGCTGCGGCTGCGGCGGGGGAGGCGGCGGCGCCGGAGGAGGCGGCTGCGGCTGTGGGTTGGTGGCCATG----------------GTGGCCTGTGCCGGGGAGGGCAAGGGCCCTGACCGGCGGACGATCCTGGGAGGCGGCGGCTGCACTGGTCCCGCCGCCTGAGGGAAGCCAACGGGATGTTGTTACGGAACCAGCGGATCCAGAGCAACCCCGGAAGTGAAAGGGAACTGGGGGAAAGGAGGAAAAGACG chr4 - 94230402 13908078 13908077 13908464 80321939 80321938 80322325 387 GCAGCCCCCGGGCACCGCCGCCCGCCCTCCCGCACCTTGGTGTCCACGTCGGCCAGGCAGTCGCGGCGGAACTGGTCGAAGAGCCCCTGGCTCTTGAGGTGACTGACGATCATGGAGACCAGCTCCGGCTcc------------gccgcgccgctc------cccgcgccg------gccccggcccccggcagcggcggctgttgctgcg---ggggtggcggcgggggcggcggcggc---------gggggctgcggcTGAGGGTTGCTGGCCATGGGGACGGCGGGACGGCGCGGCCTGCGAGGAGCGAGGCAGCCGGCTCTCCCGGCCG--GGCCCCGGGACGGGG--------CTGGTTCC---------------CGAGCGG----------CGGCCGCGGCGGCT-----GTGACCCCGGAAGCGAAAGGGAAC-GGAGGGAGGAAGCGAGAGGCG ....x....x::xx...x...x.x..:-----x.............................x.x....................................::.x..........xx..x....x...x...------------x.........:.------.........------.......xx......:........x..x......---.x..:x..........x.........---------..x...........x......x........----------------.:......:.xx.:.x::....:xx.x.::xx.....x.--.::..:....x.x..--------.....:..---------------.x.:...----------...xxx.:....x.-----.::..........:..........-..:..:.:.:..x:.:..:.. 27M5I100M12D12M6D9M6D34M3D26M9D30M16I39M2D15M8D8M15D7M10D14M5D24M1D21M 290/366 79.2% 387/94230402 0.0% 98/366 26.8% -280763 -93949639 +4552 chr4 + 190214555 13627382 13627381 13627689 308 TGGTCGAAGAGCCCCTGGCTCTTGAGGTGGTTCACGATCATGGCCACGAGCTGCGGGTCCCCGGCGCCCGCACCCGCGCCGCCCGCCCCGCCCG--CGCCG-GGGCCAGCCCCGGGGCCCGGCGGCGGCGGCGGTGGCTGCGGCTGCGGCTGCGGCGGGGGAGGCGGCGGCGCCGGAGGAGGCGGCTGCGGCTGTGGGTTGGTGGCCATGGTGGCCTGTGCCGGGGAG----GGCAAGGGCCCTGACCGGCGGACGATCCTGGGAGGCGGCGGCTGCACTGGTCCCGCCGCCTGAGGGAAGCCAACGGGATGTTG chr4 - 94230402 83230066 83230065 83230333 11000070 11000069 11000337 268 TGGTCGGAGATGACCCGTCTTCTGCACTGATTCCCCCTTTCGCTACCGAAC--CGAACCCTCGGA--TCGCAGCTTCACCCTCCGCCCGGACTGAGCGCCGCGGGCCACCCCGGGCGCGGGGAGACGGGAG-GGAGGCTGCGGCTGCGGCTGCTGCGGTGGG---------GCCGGGAGAGGGAGCTG----------------------------TGAGCCGCGGAACCGCCGCACGGCACCGCACCGGCGGGCA-----GAGCAGCGCCGGCTTCGCTTTTCCCTGCGCTGGAGCGCGGTTTGCAGGGCGATG ......:...xxx..:.x..::..x:x..:...x.xx.:x:.x:xx...:.--..:::..:...x--:....x.:x.:..x:......x.x.:.--.....-......x...x..x..xx..x.:...x:.-..x..................x....x..:---------.....::....x:....----------------------------..x....x...:----x...x..xx..xx........:.:-----.:.x:...x.....x.:..xx....xx...:x...x.x:.::x:.:..::.x.. 51M2D12M2D27M2I5M1I29M1D30M9D17M28D12M4I24M5D54M 172/261 65.9% 268/94230402 0.0% 54/261 20.7% -69602684 -24627718 +3231 chr4 + 190214555 13705264 13705263 13705322 59 CATATATACATACACACACACATATGTGTTTGTGTGTATGTTTGTGTA-AAATAAACATA chr4 - 94230402 49987094 49987093 49987153 44243250 44243249 44243309 60 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatatatata ..........:.x.........:.:::..x.......:...:......-.x...x.:... 48M1I11M 47/59 79.7% 60/94230402 0.0% 1/59 1.7% -36281830 -57948572 +3271 chr4 + 190214555 13719930 13719929 13720002 73 CTGCAACCTCCACCTCTTAGGCTCAAGTGATCCTTCCACCTCAGCCTTCCAGGTAGCTGAGACTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..::.:..:.......x.:.x:xx:x.........:..:.......::......x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -4477196 -89753206 +3023 chr4 + 190214555 13735063 13735062 13735126 64 GAGAGAAAGACACACATACACACACACACACACACACACAGAGAGAAAGAGAGAGAGGGAGAGA chr4 - 94230402 67652074 67652073 67652137 26578266 26578265 26578329 64 GAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ...:...xxx.....:....x...:...:..xx.x.x.x.:.:...:..........:....:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -53917011 -40313391 +3084 chr4 + 190214555 13782536 13782535 13782583 48 GCAGACTTGTTTCTAAGGTTGTTTTTTGTTTTGTTTTGTTTTGTTTTT chr4 - 94230402 66149561 66149560 66149608 28080795 28080794 28080842 48 GTGGGTTTATTTCTAAGGTTGTTATTTGTTTTGCTTTTTTTTTTTTTT .::.::..:..............x.........:...x....x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -52367025 -41863377 +3082 chr4 + 190214555 13786477 13786476 13786544 68 CCTTCCCTCCCTCCTTGTTTCCCTCCCTTTTTTCCTTCTTCATTTTTTTTCCTTTTTGTTAAGGAAGA chr4 - 94230402 82674374 82674373 82674441 11555962 11555961 11556029 68 CCTTCTCCTTCCCCACCCTTTCTTCCCTTTTTTTCGCCTTCGATTTTTCCCCCTTTTTTTAAAAAAAA .....:.:::.:..x:x:..:.:..........:.x:....:x.....::..:....x....::..:. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% -68887897 -25342505 +3281 chr4 + 190214555 13797855 13797854 13797908 54 ATGGAGGGAGGGATTGAGAGAGAGAGAGTGAAACAGAGAGAAGAGAGAGAAGAG chr4 - 94230402 17080184 17080183 17080237 77150166 77150165 77150219 54 ATGGGGGGAGGGGGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAG ....:.......:xx..............x.xx...:...:......:.x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -3282329 -90948073 +3024 chr4 + 190214555 13798093 13798092 13798156 64 GAGGAGGAGGAAGAGAAGGAGGGGGAGAGAGGTAGAAGAAGAAAAGAGGAGAAAGGAAGGAGGG chr4 - 94230402 82145328 82145327 82145385 12085018 12085017 12085075 58 GAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAG------AAGGAAGTGGGG .......:..:......:.....:........x..x::..x..x..------.......x:... 46M6D12M 46/58 79.3% 58/94230402 0.0% 6/58 10.3% -68347235 -25883167 +4067 chr4 + 190214555 13813051 13813050 13813152 102 TATATA-TAATTATATGTA-TAATATTATATATTATATAATATATAATATTATATATAATATATAACATATATATAACTATATATAG--TTATTATATATAATATA chr4 - 94230402 51771623 51771622 51771728 42458675 42458674 42458780 106 TATATAGTAATTATATATGGTATTCTTATATATAATATAGTATTTAGTATTATGTAGTATATTTGATATAATTGTAATTATATATAGAATGCTTGTATATAGTGCA ......-.........:.:-..x.x........x.....:...x..:......:..xx....x.:.:...xx.:...:.........--.xx..:......:.::. 6M1I12M1I67M2I17M 78/102 76.5% 106/94230402 0.0% 4/102 3.9% -37958572 -56271830 +9447 chr4 + 190214555 13827601 13827600 13827824 224 AAACCAAGGAGACACAATATTTTATGCCCTGATTATCTCTCTTCATCAACTTGCCCTTTGTTACCATGGGGAAACTAGAGGCAATAATTAAAGAATTAAACCTCCTTTATTCACTTATGCAGTGCACACTATCACATGCCATTTGATGTTTATTTTCCCGATGAAGGGAGTTTAACTTATTTATTTTTCTTCTCTTGGGGCCTAGTTGTCTGACCCACGGAAGC chr4 - 94230402 13965133 13965132 13965345 80265058 80265057 80265270 213 AATTCAAGAGGGCACAGTATTTTAGAACCTGATTATCTCTCCT----AACTTGCTCTTTATCTCAGTGGGTAGAATAGAGGTAATAATTAGAGAATTAAGCTTTGCTCACTCACTCATGAAGTGCACAAATTCACTTGCTGTTTCATATTTATTTTCCAGCTGGA-GGAGTTTAATTTATTTTGCTTTCTGCT----GTGCCCA--CACCTGACCAACCAAAGC ..x:....::.:....:.......x:x..............:.----.......:....:.:x.x:....x.:.x......:........:........:.:.:x:.:.:.....:...x........xxx....x...::...x..:..........x.x..:.-.........:......xx:.....x..----.x...:.--:::......x..x:.... 43M4D118M1D27M4D7M2D18M 159/213 74.6% 213/94230402 0.0% 11/213 5.2% -137532 -94092870 +3460 chr4 + 190214555 13844082 13844081 13844188 107 CCTTCCTTCCTTCCTTCCTTGC------TTCCTTCCTTCCTTCCCTTTCTCCCTCCCTTCCTCCATTCCCATCTCTCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTTCTTCCT chr4 - 94230402 93244863 93244862 93244975 985428 985427 985540 113 CTCTCTTTTCTTCATTACCTGGGTTGTGTTTTTCCCGTTCTTCCCTTTGTCTCTTCCTTCCCCCATCCCCTGCTCTCCAGCCTTTCCCTTATCTGTTGTTCCACTTCCTCCCT .::..:..:....x..x.:..x------..::.:..x.:.........x..:..:......:....:...xx.....:xx.:::::....x:..x::x::.:x...:..:... 22M6I85M 67/107 62.6% 113/94230402 0.0% 6/107 5.6% -79400781 -14829621 +50039 chr4 + 190214555 13850913 13850912 13852412 1500 AGACAAATACCCTATTTATCCCTCTTGACTTCATTACAAAAGATCTGCAAAGCTCACACAAAAAAAATCAACCTGCAAATCATGTTATGGTTAATAAAGCAGTAAATTAAGCCTTCCTGGCTCTACCTGCAGTATCCTGAAGGTAGTCACAGTGCCCTTTC--TGTTTCATTTTAGGGCCCAGTACAAAAGGTTTTCACCTTAGCATAATTAACTTTTTATCATTAAGATTCTGAAAAATTGAATTGTGTTGGACACAGGTCACCGTAATGAGAATTTAATGGCGACGTATTACAATGCTAGCTAAGCTTTGAGTGCGTGCTAAAGGCATCACATTGCTACTGACCTATGCAAATTTCCATCTCGGTGGCCCTTAGTTTTCCCCACTGTGGCTTCCAGCCCCCTCCTCACTTTCTCCTCATCTCCTTAAACAATGATTCCCTCATTTTCATATTAATTGCATCACTTAACTGAGATAATGCTCCCTCTGAAATGAGCAAAGGGATGAATCACTGAAACAG-GCCATTATTCTTTTTGCTTAACCAATTTCACAGGCCCCGCACAAAGCACTGCCTTCATTTGGCTTCCTATAATTGCTTATCATTAGGCCCAGCCGCCCCACGAAGTACCTTTTAATTTATTTAAGTCTCATCTCTGATGGATGGAAAATGAGTCACTTGCATATCTGAGAAGCCCAGGCTGTTCTGTGACCAGGCAAGGCGGTGGTGGAATACCCAGGAGAACT-------------------ATGATGGCAGAATATCAA----GGAGAAGCCA----CACCGGTGGGTGGC-TTCACCTGTTCCCCTTTCCCATGGAGATTCCACTGCCATCAGGTGGTCCAGGGGCAT--CCAGCAGCAGCTGCATCAGCTCCCCAAGGCTGAGAGGA-----------------GAGAGGGCTTAATTCAGGGGATGACGGCAG---------CTTGGTGCCCATAGCG----------GGGTGTGCAAGGCTACCCCAGGTGTCC--TCATCACCAGGGGCCACAGCATCCTACCTG---TGGACAGGTGACTGGGGCAGGTGG-GAGAGTGTACCTTGGCCTTGGCTTAATATTCTGGGTGCATCAGCATGATGAGATGGCTAAAGGAACCTTGTAGAAGATTGTTATTCATTCTTTCTGTGTCTCTCTGTCCTTTAGGGGGCATATGATGGTGAATGAGAGGGAGAGAAGGAAAGGACATTTTTCAAGGGAAATTATGTTGTTATCAGCCACAGCCACACTCAGAAAGGCATTGAGAGAGAATGGCTCCCTTGCCATGAAAAGGAAATATTCCTATGAGCCTGTCAGGACATCTGGGCTGAAGCCTTCCCTGGAGGTTTCCTCTGAGCACACCATGTGCTTTTGTTCCTGCGGATGAAAGGGTCTGTCAGGGAGCTAGCTCTCCATGGCCTTGTGATCTGTCCCATCATAATATTGT--TTCCTGGATATCGCTGCTGTGACTCACGCAGCCTCTCTGTTTGGTGGCTGCCTCAATA-----------TCACCCATCCCTCTCACCCACCTTTGTGTTCAGCCCTCCCCA chr4 - 94230402 13972283 13972282 13973785 80256618 80256617 80258120 1503 AGACAAAGGCT-TATTTATTGCCACTGACTACATTA---AAAATCTGCAGTGCACACA-----GAAGCCAAACTTCAGATCTTGTCATGCTTAATAAAATATTGAATTAAGCAGAAGTGAAACTACCTGCCATATCTAAAAGATAGTCTCAATGCCCTTTCAATGCTTTATTTTAAGACCAAGTACAAAAGGTTTTCACCTTACTGTAATTAACTTTTTATCATTAAGATTCAGAAAAATTGAATTGTGTTGGACACAGGTCATCATAATGAGAATTTAATGGATCTGTATTACTATGCAAGTTAAGCTTTGAATATGTGCTAAATGCATTACATTACCATTGACCTATGCAAATTTCCATCTCTGTGACTCTTTTTCTTCACCGCTGCCGCATTAAGACCCCCTCTC----TCTCCTCATCTCCTTAAACAATGATTTCCTCATTTTCATATTAATTGCATCAGTTAACTGAGATAATGCTCCCACTGAAATGAGCAATAGGATGAATCAATGAAATGGTGCAGTTATTCTTTTTGCTTAACCAATTTCACAGGACCTTCACAAAGAACTGCCTTAATTTGACTTTATATAATTGCTTATCATTAGGCACAGCAGCCCCATGAAGTACCTTT--ATTTATTTAAGTCTCATCTCTGATTGATGGAAAATTAGTCACTTGCATATCTGAGGAACACAGATTGTTCTGCTACCAGGCAACTTCGTTGTAGAATACCCTAGAGAACTTCAAAACAAGCAGCCGCTAATGCATGCTGCATATAAAATACAGGGAAACAAAGTGCAACAGCTAATGACATCCAGGAGTTCC---------TGTAGA----ACAACCGTGATGTCACCAAATTGCTTTACCTGCTCTTCCTAAATTTCCTACATGAAGGGAAAAAGAAAGACAGATGTTCTTTCGAGAGAGGTTATCTATCTGGCTGAAGGCAGAGATAGACCCTGCGTGGCTTTAACGCTGACAATGTGAGCACTGAAGGTTATAGCATTCCTCCTTTCAACATTAA----CAAAGCATCCTACACGGTTTGGA------ATTTGGTCAGAAAGCTTTAATCCACTTCTCATTT---TTAATATTCTTAAAGTAT-------------TTATTCAGGACAGCTCAAAGGAAA----TGTTCACACT-----------TCTCTCCTTTGTAAGGAA---AAGGGTGTGTGTGGGGGGGGAATTAAAA------TTTCTAAGGCAAATTATGCTGTTATCATCAACTGACATACTCAGAAGGG-ATCTAGAAAGGATGCCACCTCCAGCATAAAAAGAGCCATAGCACATTATCCTATCATGGGATTTGAGTTGAAGGATTGCCTCCAGGTCTGCTTGCAGCACACTGTGTATTTTTGTCCCTACGGATGAGACTACCTGTCACCAAGCTAGATATCAGTAGTCATTAAATCCATATAGTCATAATATTGTTCTTTCCAGACATCAATACTGTGATTCAT---TTTCCTCCATATATTAGCTTCCTCTCTAACTCCATACACACACCCGCCGCTCCCACAGACCTCAG---CCAACCTTCCCCA .......x:.:-.......:x.:x:.....x.....---..:.......:x..x....-----:..::...x..x..:...x...:...x........::.x.:........xxxxx..:xx........x:....:x:...:.....x..:.........--..:..:......:.:..x......................x::..........................x..............................:.:.................xxx:.......x....x..:..........:.::........x....:.....:.:.:.......................x...:.:...xx.:...x..:...:x..x.:x..x....::...----..........................:.........................x....................x.............x:..........x.....::.-..x:..............................x..:x.......x........x.....:...:x.....................x....x......:...........--........................x..........x...................:.:.x...::.......:x.........xx:x..x..:........x:.......-------------------...xxx..x.x....x..----:.:...:.x.----..x.:.:x::..:.-.:..xxx.....---------..x...----..x:..:.x.x..x::.x.:xx..x.--..x..xx:xx..:x..:xx..x.x::.:.xx:.:.:..-----------------.....:.x...x:.xxxx..x...x.....---------..xx...x.:x..:..----------.:.:::xx....:..:xx..xx:x...--...x..::.:----..x..........x:.---....------.:.x..x...:x:.-xxx.:.x:..:.:xxx:..---..........x::x.:..-------------.x::.x.:.:x.x..::x..:.:.----.:....:x..-----------...x......:x::..x.---:.x....x:..x.:...:.::.xx:...------...::....x........:........x.x..x.x..:........:..-..:x...:..:...x.x..::::x...:.....::xxxxxx.x:..x.x...:...x.:x..:..:.:.....xx..x...xx....:.x..:xx.......::...::......:...:.......:.xx::......xx:......x.x..x:.:.:.x.xx:...::.x:x:............--..:.::..:...:x.:......:...:---x:::...::.x.:x.:...x....xx..-----------x.....::.x...:...xx....:x.---:..:..:...... 11M1D24M3D19M5D98M2I245M4D108M1I112M2D110M19I18M4I10M4I14M1I12M9D6M4D26M2I38M17I30M9I16M10I27M2I10M4D16M3I4M6D14M1I19M3D18M13D24M4D10M11D18M3D28M6D49M1D187M2I27M3D28M11I26M3D13M 1028/1415 72.7% 1503/94230402 0.0% 173/1415 12.2% -121370 -94109032 +10944 chr4 + 190214555 13860562 13860561 13860846 285 AGATGCTTATTTTATTTCTAAGTGATTGAAATCAAACGCATTGGAATGAAACTTTTTTCCCTATTAACCTTTAGCAGCATTTATAATGACCATGTTAAATCAAGCCTCATTACAATGCCATGGGGCCTGACTGAAATACTGCAGGTATGATGCTGAGTAATTTCATAAATTATTAAGTGGTAATTGAAAGTAATATGGCAGAATACATTT---TACTCCTGAGGGGGATAATACAGAAGACTTTGGAAGGAAATAAAGTTGGTTAAAATATAGCATATAGGAAAGAGT chr4 - 94230402 13974964 13974963 13975235 80255168 80255167 80255439 272 AGCTGCTTGTTTTAGTCCAAAATGGCTAAAATTAA-TACATCTGCAGGAA--TCTTTCCCCTACAAACCCTCAACAGCAGCAATAACGAGTGTGTTAAATCAGACTTCATTGCAATGTAATGAAGCCTGACTGACATATTGCAGGTATGATACTAAGTAATTTCATAAATTATTAAGCTGTAATTGAAAGTAATAGTGCACATTACTTTTCGACACGCTT-----------TAAAAAAGACCTTGGCTTGAAAATAAG--GACTGTAGAATGGCTGATTGGAAATAAT ..x.....:.....x.:.x..:..::.:....:..-::...:x.x.x...--.:...:.....:x....:.:.:.....x:x....:..x::..........::.:.....:.....:x...::..........x...:............:..:......................:x................xx...x.x...x...---:..x.:.-----------..x.:.....:....xxx....xx...--.::.:x.:x..:..xx..x.....x.:. 35M1D14M2D158M3I7M11D27M2D28M 197/269 73.2% 272/94230402 0.0% 19/269 7.1% -114402 -94116000 +15586 chr4 + 190214555 13876183 13876182 13876509 327 TTGTAAGAACATACTTAAAAATACACTGTGTAGCTAGTTAGTAACCTCTATCTATAAATCCCCTCAATGAAATTCCAGGGCATTAATCGGCCATAAAGCTCCACAG-AGAGGCATTTTCCTTAGCTAAAGTCAGCATTTTCTAACTTCCTGTAAATATTCTCTCACATGAAGCG-GTTAATAGGTTTCCTCATGCAGAACATTCTTGGTCACCAATGGAAAAGTTCTCTAAAAGATGGATTGCTTTCCTGTGGCCTCAGGACAAATGCTGATCAGAATCCTTATGCTGCCTGACACCCCCAGTTAATATCAGAACTTGAAGCACTGGTT chr4 - 94230402 13983617 13983616 13983945 80246458 80246457 80246786 329 TTGTAAACATGTTTTTAAAATACTTTTAAATAGTTATTTTGCAACTCTTATCTATAAATCCCTTCAATGAAATATCAGAGAGTTATTCAACTGTGAAACTACGTCGCAGGGTCATTTTCCTTACCCTGGGTCAGCATTTTCTGACTTTCTGTAAACACTCTCTCACATGATGCTTGTTAATAGGCTTCCTCATGCAGAAAATTCTTGGCAGTCACTGGAAAAGTTCTCCAAAAGACTGATTACTTTCCCTTTGCCTGAGGCCAGCTGCTGATCATGGCCCTTACGTAGCATGACAAACACAATTAATATCAGAACATGCAACCAGGGTT ......:x.::.x:......xxx:x:.:x:...:..x..x.:...:::..............:..........x:...:.x:...x..::.::.:..:..x.::x.-..:.x...........x.:x::.............:....:.......:.:............x..x-.........:..............x........:x::..x.............:......:x....:......:x.x....x...x..:x.........x:::.....:.:x..x.....xx.x..:.............x..x.:.xxx.... 106M1I67M1I154M 239/327 73.1% 329/94230402 0.0% 2/327 0.6% -107434 -94122968 +3139 chr4 + 190214555 13892623 13892622 13892662 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -5089692 -89140710 +3102 chr4 + 190214555 13892625 13892624 13892660 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -67736439 -26493963 +3353 chr4 + 190214555 13892625 13892624 13892664 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -5089690 -89140712 +3316 chr4 + 190214555 13892627 13892626 13892662 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -67736437 -26493965 +3567 chr4 + 190214555 13892627 13892626 13892666 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -5089688 -89140714 +3102 chr4 + 190214555 13892629 13892628 13892664 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -67736435 -26493967 +3413 chr4 + 190214555 13892629 13892628 13892670 42 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ................x...................::..:. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -5089686 -89140716 +3854 chr4 + 190214555 13951174 13951173 13951256 83 TAGAGATATTTATTGAT-TGACTTGACTCTGTATGTGTGTGTGTGTGTATACATATACATATATGTGTGTATACATATACATAT chr4 - 94230402 70982598 70982597 70982681 23247722 23247721 23247805 84 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..x.x.........x..-.:....xx:..:x.:.........:.....:.......::x:...x:.....:.:....:...:.. 17M1I66M 61/83 73.5% 84/94230402 0.0% 1/83 1.2% -57031424 -37198978 +3058 chr4 + 190214555 13951200 13951199 13951285 86 TCTGTATGTGTGTGTGTGTGTATACATATACATATATGTGTGTATACATATACATATATGTATGCATACATACATACATATACATG chr4 - 94230402 17853461 17853460 17853546 76376857 76376856 76376942 86 TCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG ...x...x...x.:.:..:::...::......:.x:.:xx.x.:..:::......:...x.x......::..x.x.x:...:.... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -3902261 -90328141 +3058 chr4 + 190214555 13951216 13951215 13951305 90 TGTGTATACATATACATATATGTGTGTATACATATACATATATGTATGCATACATACATACATATACATGTGTGTATACATATATGTATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTAC--------ATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .....:..::.:.:....x.::...:.x...--------..........x.....xx.....:.:...:::::::.x...:.x...x... 31M8D51M 56/82 68.3% 82/94230402 0.0% 8/82 9.8% 5555427 NA +3116 chr4 + 190214555 13951342 13951341 13951429 88 CATATAAACACATACACATAAACATATATACATATATGTGTGTATATATGCATATATGCATACACATATACACATATACATATGTACA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATA----CACACACACACACACAGACACAAATGAATA ...:.:x::.::.:::.........:...x:.:......:..:x..:..xx...----..:.....:.:.....x.:...x...x.:. 54M4D30M 56/84 66.7% 84/94230402 0.0% 4/84 4.8% 5555555 NA +4414 chr4 + 190214555 13951383 13951382 13951519 137 GTATATATGCATATATGCATACACATATACACATATACATATGTACATGTGTATATATACACATGTACACACACACATATATACATATATTCACATATATACATATAGACACACACATATATTCA-----CATATATTCTCA chr4 - 94230402 73121101 73121100 73121240 21109163 21109162 21109302 140 GTGTGCATGCATAT--TCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCA ..:.::........--x................x.x:...:x......::.....x:.....:x...:.::::x::.:.....x...::::....x.x.:...:..:x.:.x:..x..x.x:.:.-----..x...:x.... 14M2D109M5I12M 89/135 65.9% 140/94230402 0.0% 7/135 5.2% -59169718 -35060684 +3458 chr4 + 190214555 13951401 13951400 13951487 87 ATACACATATACACATATACATATGTACATGTGTATATATACACATGTACACACACACATATATACATATATTCACATATATACATA chr4 - 94230402 27943537 27943536 27943623 66286780 66286779 66286866 87 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACA ...x:....:..xx:.:....:...:...x....::.x...::..::.::.::::.x.......x..x..:.:......:..x..:. 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% -13992136 -80238266 +3115 chr4 + 190214555 13994708 13994707 13994773 66 CCCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGCGATTACAGGCGCCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .::.::..........x...x..x.x........::.:........x:.:....--..:x...... 54M2D10M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% -4202431 -90027971 +3067 chr4 + 190214555 14000034 14000033 14000104 71 AGGGCATGTTACTTAAACTCTCTGTTTCCAAGGTCCTCATTTATAAAATGGGAATAATA--ATCACACTACTT chr4 - 94230402 15751732 15751731 15751804 78478599 78478598 78478671 73 AGGATCTGTGCCTTAATTCCTCTGTTCCTGAGTTCTCCATCTGTAAAATGGAAATAGTAATATTGCTCTACTT ...::x...xx.....x::.......:.::..x..::...:.:........:....:..--..::.x...... 59M2I12M 50/71 70.4% 73/94230402 0.0% 2/71 2.8% -1751698 -92478704 +3615 chr4 + 190214555 14017512 14017511 14017597 86 ATGTTAGCCAAACATAAATATGTA-----GGTTGCTTGC-------TAGGAAAAAAAAGTTATTTGAGGGTTTTCTGTCATTTTATGTTATTCTTTCA chr4 - 94230402 28387483 28387482 28387580 65842823 65842822 65842920 98 ATGCTACTAAAACAAAAGTATATAACTCTGGTGGCTTTTCTTTTTTTAGAAAAAAAAAGATGTTTTATGATTTTCTGACATTTTGTGTGATTCTTTCA ...:..x:x.....x..:...:..-----...x....x:-------...:.........x.:...x.x.:.......x......:...x......... 24M5I10M7I52M 67/86 77.9% 98/94230402 0.0% 12/86 14.0% -14369971 -79860431 +22485 chr4 + 190214555 14066767 14066766 14067682 916 AAATGTTCTCTTCTCTATTGCCTTTGA---CATTTGTTGCCATCAGATACCACCTTTCTTATGTGCATAAACTGCTTATTTGAT-TTGACCTGGTTCTGAATGTAAGAAATTGATTCAGAAGGGCCTCTGTCTTTAGAAATAGTATTGCATGAAAGCATTATGCTAACATATGTTGAAATTTAAAACTGCAAATGCAGGGGGAGAAAATGATCTTGTAGCTACTTCTCTCATTTA-GAGAC-ACAAGACATGAGGCTTTATTCTAATAAAATGTAGTGTGTTTGCAGCTGGGGCTGGGGCAAAGTCAAGATACATTAGGAGAAATTGACATTAAAAGTGCAATATAACAGATGGATGAAAAAATGAATTTTTATCAAGATGATCCATTAGCGTTCTGCAGCCAGGCAGAGGAGAACAATGACCTGGAACAAATTAAGAAGAATGATGCTTGACTTGTGTTTGCTTGTTCTAAAGGGTGACCCATATTCATAATCTTGAATTAGAAATGCATTTGCTT--CTGGTTGATTAGATACATTTTTCAACTATTTTTTGTCTTGTTCCCCCCCCCTTGGGTTTGGGGAGCTGGGTGATGGAGGTGGTCTGGTGCAAAGGATTAGGTTCATCAAAT-TAGATTAAATGAAAAGAGAGAAAACAAGCCCAGTAGAGTGGAACCCTGACTAAATGGTGGAG----TTCTTTGCAAAGAAGGAGAATTAATCTCCAAATTGAGGGGAACTGAACAGCTCAATCATCAACTATTAACCTCAAATAACCTTAGGTGACTCTGGC-ATCAATATGTAAAAGCAAGTCTACTACAGACCGTGATTTTAACTTC-----AAATTCTCTATATTTGATAACTGTCAGACT--TCCTGTCTACTCTTTAATCAGTCTCTGGAATTAGAA----------AGTACTTACTTTT--TAATGAAAAGA chr4 - 94230402 14070355 14070354 14071230 80159173 80159172 80160048 876 AAATATTCCCTAC-CAACTGCCTTTTTTTTCATCTTTCACTATAGAAGCTCTCTGTTAATGCCAATATAAACAGCTTAGATGAGAGGGACCCACTGCAGTGTCTAGAAAACTGACTCTGAGAGAAGTGTGCACTTGAAAATTGTCATGAATGAATTTATTACCCTACCATATGCTAAAACTTAAAACTGCCAGTGCTGCAAAGAAAACTG--TCTGCAGCTTCCACTTGCATTTATGAGACCAAAAGAGATAAAATTTTATTCTAATAAAGTGTGGTGCATTTGCAGCTGGGAGTGAGGTAGAATCAAGATACATCAAGTAAAAAAGACATTACAAGTACAATAGAACAGATGGATGCAAATGCGAATTTTTATCGTGATGATCCATTAGTATTTTGAAGCCAGGCAGAGAAAAACAGTGACCTGGAACAAATCAAGAAGAATGATGCTTGACTTACATTTCCTTGTGC-AAAGTGTGACCCACATTCATAGTTTTTAATTAGAAGTATAATTCCTTTATGGGATGATGAG-------------CTAATTTCTGTCCATTT---------TTG-----------------GACAGAAATTTTC-----------ATTAAGTACCTAGGATATATTACAAATGAATGGGGGGGAAAT-GGACCAGTTG---------TTGGTTCAGTTACAGAAAAGCTTCCCTATGAAGTAGAGGAATAGATCAGTACATTGCTGAGTGCTGACCAGTTGCATAAGTCACCAGCAACTTCATCCAACCTTGAGTAAATCCTGCTATCAATATTTAAAA-TAAGTCTAGAGCTAGCCtt--tttttatttttaaaaaaatCCTC--AACTAGCCATCTAGAAGGCTGATTTTGTC----CCATAAATAACCTCTGGAATGAAAAACACATGCACAGCACTTTCTTCTGCTAGTGGAAAGA ....:...:..x.-.x.:.......xx---...:.x.::.:..x::.xx:.x.:x..xx.::xx::......x.....xx...x-xx....::x.x.x.x:.x..::...:...:..x..::.:xx.x..:x:..::....x..xx..x.....xx:....:x...x......:.:...:..........x.:...x.x:::::...x..--::..:....x.:x..:x......-.....-.x....x..:.:::..............:...:...::............:x..:..:.:.:...........:.:.x:...xx.......x....:.....x............x...x::...........:x.............::..:..x............:.:....:...............:.....................:::...x.....x.-....x........:.......:.:..x........:.::.x..x...--:x..x....x..-------------...x...:....:xx..---------...-----------------..::..::.xx..-----------....:..x.x.x::..-..xxx:.......x:.:.:.:...:-:.x.....x.---------:..::.x.:.x:::..:----...::.:::...x..::....x:...xx:.x....xx.:.x:....x...:.xx..x.x:x..:.x:...:...xx:......::..:.x..:x..-........x.....-:.......xx:.x::..x.--....x.:..:-----....:...--x.:.x.x:.x..:xx..:..--.::....----.:x...x:.::.........x.:..----------..:....x...:.--..:..:..... 13M1D13M3I54M1I125M2D23M1I5M1I227M1D47M2I12M13D17M9D3M17D13M11D16M1I25M1D10M9D17M4I96M1I14M1D19M2D10M5I8M2D20M2I7M4D25M10I13M2I11M 577/843 68.4% 876/94230402 0.0% 106/843 12.6% -3588 -94226814 +3098 chr4 + 190214555 14111934 14111933 14111999 66 AGAATATCTGCAGGAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAGAAGAAGAAGCCAGACCAGGAA chr4 - 94230402 31821393 31821392 31821458 62408945 62408944 62409010 66 AGAATACTCACAGAAAAGAAAAATAAAAAAAAGGAGAAAACACAAAACAAAGAACCACAGCAAAAA ......::::...:...:.....x.........:....:.x.x.:..x..::.:...x.x..::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -17709459 -76520943 +3030 chr4 + 190214555 14115764 14115763 14115816 53 GATGGATTCAGTGACTTCACCAAAGTCACCCAGCTGGCCAGTGGCAGAGCTGG chr4 - 94230402 14332083 14332082 14332135 79898268 79898267 79898320 53 GAAAGATGAAGCAATTTCTCCAAAGTTAGCCAGCAGGTCAGTGGCAGAGCTGG ..x:...xx..::.:...x.......:.x.....x..:............... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -216319 -94014083 +18315 chr4 + 190214555 14152361 14152360 14152730 370 CCAACTAATTCCAATAATGATCCTTTACAAGCC----TCTGCTTGCTACAGAGTGTTAACTGTTTAGTAGCAGTTGTTTTTAAACAGCCCATAACATTGCCATTACATGAATTATACATGGCTTATAAAATGATTATTTATTCAGTGGAAAATTAAATTCGTCAGTGTTTTCCAAATCTGAGCTAGGACATTCATCAGAAAAACTGTTAAATTTTTAATCAACTGTACTATGGTTGATGTAGCTATCAGCCTAAATTGCTCTTTCTCTGTCATTCCCCTTGTTGCAGAATATAGTGTAGAATTACCAGCTCTACAATGCTAATTGATTTTTTTCTT----GCAAAGATTTAAGACACAGCAGCATCCCATCTAACACT chr4 - 94230402 14113993 14113992 14114363 80116040 80116039 80116410 371 CCAGCTGATACTAACAGTATTC---TGCAAGTCCTGTTCCACTGGGCAT---GTGTTAACTGTTTAGCTGCAGTCATATTTCACCAGACTGTCAAGTTAACATTACATGAATTATACACGGTTTATAAAATGATTATTTAATCAGTGGAAAATTAAGTTCATAGATGTTTTCCAAATCTGAACTAGGACATTCATCAGTAGAACTGCTAAATTTTTAATCAACTCTGCTGTGCTTGATGTAGCTATCATTCTAAATTGCCCTCTCTCTGCTGGTCCTCTTGTTGTAAAATATATCTTAGAGTTATCCATTCT-CATTTCTAATTGATTTTTTTTTTCTCAGCTCAGATTTAATGCAGGATGGCACATCACCCAGTATT ...:..:..x.:..:.:.:x..---.:....:.----..::..x.x:.:---...............:x.....::.x...x.x...x.::.x.x:..:x..................:..:..................x...............:...:.x::................:................x.:.....:.................x.:..:..x...............x:.........:..:......:::x...:.......:.:......x:x....:...:.x::...-..x.x...............:..----..xx........x:..x::::...:x:..:.:.::.:. 22M3D8M4I12M3D260M1D23M4I38M 277/363 76.3% 371/94230402 0.0% 15/363 4.1% 38368 NA +3019 chr4 + 190214555 14166208 14166207 14166262 55 TTTTTTTCTTTTTTTTTCCTTTTCTTTTTCCTTTCTTTTCTCTTTCTTTTTTTTT chr4 - 94230402 88692414 88692413 88692468 5537935 5537934 5537989 55 TTTTTTGATTTTTTTTTTCTGTTCTTTTTTCTTTCCCTTCTCTCACTCTCCTCCT ......xx.........:..x........:.....::......:x..:.::.::. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -74526206 -19704196 +3227 chr4 + 190214555 14188450 14188449 14188514 65 CTTTTCTTCTTTCCTTTTTGAGGTTTTTGGTTTTCTTTTCTTTTCTTTTTTTTTTTTTTGGTTTG chr4 - 94230402 78373637 78373636 78373701 15856702 15856701 15856766 65 CTTTTCTTCTTTCCCTCCAGTGCTGTCTCGTTTTTCTTTCTTTTCTTTTTCTTTATCATGTCTTG ..............:.::x.x.x.x.:.x.....::..............:...x.:x..x:... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -64185187 -30045215 +3648 chr4 + 190214555 14195224 14195223 14195356 133 ACTATGACAGTGACATTATCAAAAATAAAATAAATAATTCTTGCTGGTACATTTCATGATAACTTTTTGACTGGGTCTTTGAAAATGACCAGAGTTTTATCTAGGCAAAAACAAAAAACAAACAAACAAAAAA chr4 - 94230402 56887417 56887416 56887534 37342869 37342868 37342986 118 ACTTTAACAGTAACATTATTAAGCATACA---------------CGGTATTATTTAAGACCACTTTCTAGAAGAACTTCAGGGAATGTTAGTGGCTTTGTAGAGACAAAAGAAAAAAACAAACAAACAAAAAA ...x.:.....:.......:..:x...x.---------------:....:xx..:.x..:x.....:.::xx.::::.:x.::....x:x:x:.:...:.xx..:.....:x..................... 29M15D89M 77/118 65.3% 118/94230402 0.0% 15/118 12.7% -42692193 -51538209 +3009 chr4 + 190214555 14195331 14195330 14195371 41 AAAACAAAAAACAAACAAACAAAAAACAAAAAAAGAGACAT chr4 - 94230402 9270837 9270836 9270877 84959526 84959525 84959566 41 AAAACAAAAAACAAACAAACAAAAAACAGGCTAAGAGATAT ............................::xx......:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 4924494 NA +3026 chr4 + 190214555 14204687 14204686 14204792 106 GCATATCTCCCATGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570536 41570535 41570641 52659762 52659761 52659867 106 GCAGTTCTGACATATATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ...xx...xx...:.x...:x..:x..x.:::.:.x:..:...:...............xx..:x:x.xx:::x...:::....:.xxx............xx... 106M 66/106 62.3% 106/94230402 0.0% 0/106 0.0% -27365849 -66864553 +3319 chr4 + 190214555 14204697 14204696 14204803 107 CATGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTTCT chr4 - 94230402 49363790 49363789 49363897 44866506 44866505 44866613 108 CATTTCATTTCTTCTTTCTTCCCCCTCCTTTGTCATTTTTTCTGTATTATTCTATTTCTTTCCTAGTTATTTGCTGTCCCTGTTTTTCTTTGTCCTGTATGTCTTTCT ...x..x..::.........:.::::::.:.x..x..:.....x.x..x:.:.x........:.xx..x:..x..x..::.x...:.:.:.-.:..x.x.x....... 91M1I16M 69/107 64.5% 108/94230402 0.0% 1/107 0.9% -35159093 -59071309 +3245 chr4 + 190214555 14217067 14217066 14217135 69 TTATTCTCCACACTTTATAACTGTGGGAATCAATACTCAGAGAATTCAGATGATTTGTTCATGGTCATA chr4 - 94230402 15193220 15193219 15193288 79037115 79037114 79037183 69 TTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATA .....:......:......x:..x:.....::.x.......x..x.x.:..:.:..x:::.x....... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -976153 -93254249 +8907 chr4 + 190214555 14251897 14251896 14252287 391 ATGATATTAATTAACAG-TAGTTACAAATTCAGGTCATAGACAACAAGGTGGGAACAATT--------------TTTTGTCAGCT--AAAGCAAAAGCATCTTGAACACTAGCA-TAGGCTTCTATGCATGGGTGATAGAATGGAAACTAATGATTACCTACTGCATAGTTCATTTACCCAAAAACCTCCAGGCAGTCATTTGGATCAAGTATATAGAAAAGGTAAAGCCAGGCCTCGAATCTGA--------------TGGCAATAATTATTCATGA-TGCAGAAGGAAAGGGTAATTTTTGAAGTATATTTGATCTGTGCTGGACAATGAGGGGAAATGTAACAAATTCAAATGCA----------TTCAGAATCCAAGGAAAATCTTTACCCAAAAGGAGAAAACCAGATTCTCTCCTTTAACCAGCTTAA chr4 - 94230402 14148549 14148548 14148970 80081433 80081432 80081854 422 ATGATATTGACAAATGGCTAGATAAAGATTAAGTTGATAGGTTCCAAAGTGAAAAAAACTATAACGAACAAAAACTTTGTCAGCTGTAAGGGTAAAGTACTTTGGAGACTTGCAATGCACTCATATGCATGAACAATAAAATGTTTCTTGATGATAGTCTGCCTCACAGTTCATTTGCCTGAAAATCTCTTGGCAGCCATCTGGATCAGGTTTAAATAAAATGTAATACTAAGCCCCTAATCTGACAGTGATAAGCTGGTGACAATGATTATTCATGAGTTTACAAGGAGAGTAGACCTTGAGAGGCAGATGTGA---GTGCTTT-CTTTCAGGCCCAATTTCAGTGCTTTGAATGTATTGGAACCACTTCAGAACATAAGGTTTGT-TTTATTTAAAGGAAAAAAATA-------CTTCTTTAATTAGTTTGA ........:.:x..::.-...x..x.:...x..x.x....::xx...:...::..x..:.--------------:..........--..:.xx....:.::...:.x...x...-.:x:..:x........::::...:....xxxx:.:.....x::..:.:x..:.........:..::....:...:x.....:...:.......:..x..x.x....x....x:.:.:...:.x.......--------------..:....:...........-.x:.x.....:..x:x.x:..xx..:.:.x..x...---.....xx-.xx.x...xxx...x.x.xx:x..::....:.----------.......:x:....xxx:.-....:::...:.:.:....:x-------..:......::..:..:. 17M1I42M14I11M2I27M1I130M14I19M1I36M3D7M1D32M10I19M1D21M7D18M 253/379 66.8% 422/94230402 0.0% 55/379 14.5% 103348 NA +42430 chr4 + 190214555 14267592 14267591 14268190 599 AGAGCATCACAATGGCAGTCCACAAATGA---TCCCTCTCCTTTGAGAGAGACTAACTGTAGGGGAAAAGATAATTACTTAGTTCCTTTATCTCCAAATTATTTGTAATAAAATCTGAAATCACACCACAAGGTCTTTCATGAGGATGTCATAAATTAAGATGCATTGGCGTATCTGGTGCATCTGTTCCATTCTCTGGCCCTTTGTCTTCTGCAAAGAGCACACCAACCTCAATACCCAGCAGACAGCATTTACGCAAATGATGTCATGGTCTGTAGCATTAATATTCAGTGATTGTCTGTCATAGACACCTTACTGTACATCTGTTATGCAAATGTATGTTAATTCCGACTCCCTGACAGCTGCCTAGCTTCCCTCCCTAAAATGATCTTTTCCATTTTGAAGTTTGCAATCTGTTCCCCAAAATGTTAATCCAACAATTAGCTGAAATTGCTAAACAGAAATTGTACATGTTTGATCTAAAATAGAAGGTAGCATTTTAAAATAGATGGTGAACCTTCTTCCCACATCATTTATTTTATATGTGCTTAAACACAATGTAAACACCGATCTCCACACAGCTTGGCTTGGGATATGTGGCA chr4 - 94230402 14164982 14164981 14165581 80064822 80064821 80065421 600 AAATCATCACAATGGTTGTC-ACAAGTAAGCTTCCCTTTCCTTTGAAAGA-ACTGAGTGTAGTGGAAAAGATAATTACTTAGTTCCTTTATCTCCAAATTATTTGTAATAAAACCTGAAATCGCACCACAAGGTCTTTCATGAGGATGTCATAAATTAAGATGCATCGATGTATTTGGTGCATCTGTTCAGCTCTGCACTCCTTTGTCTTCTGCAAATAGCGCAGCAGCTTCAATACCCAGCAGACAGCATTTACGCAAATGATGTCGTGGTCTGTATCATTAATATTCAGCGATTGTCTGTCATAGACACCTTACTGTACATCTGTTATGCAAATTTATGTTAATTTTTGCTCACTGACAGCTGCCTTGGTTCCCTCCCTAAAATGATCTTTTCCATTTTGAAGTTTGCAATCTGTTCCCAAAAATGTTAATCTAACAATTAACTGAAATTGCTAAACAGAAATTTTACGTGTTATGTCCAAAATAGAAACCAGTGTTTTTAAATAGATGGTGAATCTTCTCTTCACATCATTTGTTTTATATGTGATTCAGAGAAGGGTAAACATTGATCTTTGCACAGCCTGTGTTGGGATAAGTGACA .:.x...........:x...-....:.:.---.....:........:...-...:.x.....x..................................................:........:...........................................:.::....:..............x::...x::x:.................x...:..x..:.:.....................................:.........x.............:............................................x..........::x:...x.............x.x..................................................x............:........:......................x...:....xx:..:.........:x:..::....x..............:.....:::..........:...........x..x.:x:x.:x.......::.....:::......:..xx........x...:.. 20M1D8M3I18M1D551M 518/597 86.8% 600/94230402 0.0% 5/597 0.8% 102610 NA +3254 chr4 + 190214555 14300321 14300320 14300392 72 TCTCTCCTTGTCTTTTTTTGTTCCTTCCTTCATTTCTTCTCTCACTTTTCTTATTCTTTCTTT----TTTTTCCCT chr4 - 94230402 579248 579247 579323 93651080 93651079 93651155 76 TCTCCCCTCCTCATTTCTCATTCCTGCCTTCATGCCTTTTCCCACCCTTCTTCCTCCTGCTCTGAGCTTTTCCCCT ....:...:x..x...:.::.....x.......x:...:..:...::.....x:..:.x..:.----....:.... 63M4I9M 52/72 72.2% 76/94230402 0.0% 4/72 5.6% 13721073 NA +3100 chr4 + 190214555 14309529 14309528 14309587 59 AACATGGCTTTAGAAACAAACTGCCTGAGAACTGCCACTTAGTATCTTTGTGAGCTCAG chr4 - 94230402 27207646 27207645 27207704 67022699 67022698 67022757 59 AACATAACTTCAAAAGCAAACTCCCTGTGAACTGCCACTGGGTTTCTGCAGTAGCTCAG .....::...:.:..:......x....x...........x:..x...x::xx....... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -12898117 -81332285 +3815 chr4 + 190214555 14318269 14318268 14318405 137 GAATTCTTCCACCT------GCTGGCCCTTGGAGAACTAGATTGCCTCCTTTTAAAAATCCTCAACAGTTGTTCAAAGATCTGGCAAATTCATTATCACCTCTAATAGCTTCTAATTAAACTGTTATAGTAAAGCTGTAGGAT chr4 - 94230402 14184891 14184890 14185012 80045391 80045390 80045512 122 GAACTCTTCTCTCTAGTGTTGATGGCGCATGGAGGGCT-----------TTTTTAAAGCGCTC--------TTCAAA--TTTGTTGAATGAATTATCACCTCTAATAGCTGATAATTAAACTACTTCAGCAAAGCTGTGAAAT ...:.....:x:..------.x....x.x.....::..-----------....x...::x...--------......--.:..x::...xx...................xx..........::.x:..:........:::.. 14M6I18M11D14M8D6M2D64M 87/116 75.0% 122/94230402 0.0% 27/116 23.3% 133378 NA +3174 chr4 + 190214555 14337716 14337715 14337755 40 TGTGTATGTGTGTGTGCGAGAAAGAGAGAGAAAGAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....:..........:....:.........:....:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -4644599 -89585803 +10002 chr4 + 190214555 14340408 14340407 14340784 377 TTCCTCCTGCCTGTGCACATAACCACTACTTAATTTAGAGTGATTCAAAAGGCAGGGGAGACGAAAATGCAGAGTTCATGCTGTTAGAAGTGATCACTCTG-CTTGGAGACATATGTAGCCACAGAAGGCTGAACAGATCAGAGTAGCTTAAAG-CACTGAGAGATAAAAGGACCAGCATTGCTGATCGGGACCCCAGAGACCAGAGACG-GGCCTGATGCATATATACAGCCCTGGCAGCCTTCATAGCTGCTGCCTTTGCTTTTCTTGCCTGCTTTTTTTTTGTTGTTTTTATTTTAATTTTCTTAGTAAAACTCTGATGAATTCAGGGTAAGAGAAGGAAATGGGAGCTGTGCAGATGTGTTAATTCAAACCTTACA chr4 - 94230402 14196183 14196182 14196536 80033867 80033866 80034220 354 TTTTTCTTTTTTTTTCATGCAGCCACTGTTTAATTTACAGTAAGTCGGGAGGCAGGAGGGGTGGTAAAGTTAAGCTCATGCTGTTGAGAACAATTATCCTGGCCCACAGACATATGTAGCCCCAGAAGGTTGAACAGACCACCATAGCTTAAAGGCACTAAGA--TAAAAGGGCACG---TGCTGCGTGGGCCCAGTGGGAGCAAGGCCACAGCCTG-----CAAACAGAACCCACTCTGCTTTCAT-----------TTGATTTG--TGCCT---CTTTTCTTTTTTTTCTAATTTTGATTTATTTAATAAGACCCCGGTGCATTCATACGAAAGAAAGAGAATGGTAGCTGGGACAATGTGACAATATCAATCTAATA ..::..:.x::.x.x..:::.:.....::........x...:.x..:::.......:.:.::.:x..x.:x:..:..........:::.:::..:.::...-.:::x..............x.......:........:..xx:..........-....:...--.......:.xx.---.....xx:...x..xxx.:..x..::.x.:-:.....-----:.x.:.x.:...xxx.x..:.....-----------...x...x--.....---:....:..x..x..:.x.....:....x:...:...:..:.:.:..x.....x:xx..:::...::.....x.....x.xx:.....x:...x:x..:..x.:. 101M1I52M1I8M2D12M3D30M1I6M5D25M11D8M2D5M3D104M 234/351 66.7% 354/94230402 0.0% 29/351 8.3% 144225 NA +4139 chr4 + 190214555 14341980 14341979 14342088 109 CTAACCACCCTAAGACGTA----AGTAGAGTTATCCTCATTTTACAGATGAGGAAACTGAGGTG-CAGGGAGACTAAGTCAC-TATCCAAGGTCATACAACTAGTAAGTGATAAA chr4 - 94230402 80987834 80987833 80987947 13242456 13242455 13242569 114 CTAACCCCCCTGCGAGGTAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACA-GGTGAGTCAGTGGCAGA ......x....:x..x...----.....x:x.....::............:...........::-:..:...:...x..x..-.::.........:.-:::x...x....::.:. 19M4I41M1I17M1I14M1D17M 80/108 74.1% 114/94230402 0.0% 7/108 6.5% -66645854 -27584548 +3965 chr4 + 190214555 14349043 14349042 14349139 97 TAGCATTCCCATTTGACAGGTGATGAAGCTGAGACATAAGAGAAGTTATATTATTTGTTCAAGGTTACA---TAATTAAAAGCAAAGCTATAAAGAAGCC chr4 - 94230402 80987862 80987861 80987961 13242442 13242441 13242541 100 TAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAGGTGAGTCAGTGGCAGAGCTGGGAACAGACC ...:..:..:....x....:..:x...:.....:...x.....:.:..::.x.:...::......:...---x.:.:.:x:...:....:x:..x.::.. 69M3I28M 65/97 67.0% 100/94230402 0.0% 3/97 3.1% -66638819 -27591583 +3004 chr4 + 190214555 14362748 14362747 14362797 50 GACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCT chr4 - 94230402 60463243 60463242 60463292 33767111 33767110 33767160 50 GAGTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGTCT ..x...x...:..xx..........x.............:..x..:.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -46100495 -48129907 +3020 chr4 + 190214555 14379990 14379989 14380062 73 TCCTCTATGCAAGGAAATAAGACCTCTAACTCATTTTACATAGGTCGCTGAACAGCCAGCAGACAGTAATGAC chr4 - 94230402 25406775 25406774 25406847 68823556 68823555 68823628 73 TCTACTAAGAACTGGACCAAGAATATCAGCTAATTTTATATAGGTCACTGAACAACAGACAGATGGTAATGAC ..:x...x.x.xx.:.x:....x:x::.:..x......:.......:.......:.x::....::........ 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% -11026785 -83203617 +3109 chr4 + 190214555 14389367 14389366 14389431 65 ACCGCTGAATTCTGCAAAT--------GAATCAAGGCTAATATATACATATATGTGTGTGTGTGTGTATATAT chr4 - 94230402 26564499 26564498 26564571 67665832 67665831 67665904 73 ACCATTGTACTCTGGGAGTAGTTTTTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ...::..x.:....x:.:.--------...x.x.:.:....x....:....:...........:......... 19M8I46M 50/65 76.9% 73/94230402 0.0% 8/65 12.3% -12175132 -82055270 +3103 chr4 + 190214555 14389374 14389373 14389444 71 AATTCTGCAAATGAATCAAGGCTAATATATACATATATGTGTGTGTGTGTGTATATATATATATGTATATA chr4 - 94230402 51180433 51180432 51180503 43049900 43049899 43049970 71 AACTCTGTATTTCACTCAAGGCCGGTTTAAATATAGATGTGTGTTTATGTACACACATATATTTGAATATA ..:....:.xx.x.x.......:::.x..x.:...x........x.:...::.:.:......x..x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -36791059 -57439343 +3135 chr4 + 190214555 14389406 14389405 14389486 81 ATATATGTGTGTGTGTGTGTATATATATATATGTATATATACATGCGTGTGTATATATATATGTATATATATGTGTGTGTA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x.......::..x:x:......::x....:.:.:....x:.:.x:.....x:...::. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -67011887 -27218515 +3107 chr4 + 190214555 14389457 14389456 14389502 46 TATATATATATGTATATATATGTGTGTGTATATATATGTGTGTGTG chr4 - 94230402 19704281 19704280 19704326 74526077 74526076 74526122 46 TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..:.......:........x.....:...x:..:.:.......... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -5314824 -88915578 +3022 chr4 + 190214555 14389504 14389503 14389569 66 AGATATATATATACATATATATACATATATACACATATATATACATATATATACACATATATATAC chr4 - 94230402 19637120 19637119 19637185 74593218 74593217 74593283 66 AGATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATAC ....:x...x..:......x..xx.........:..x...x..:::..:.x..::.....::.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -5247616 -88982786 +3550 chr4 + 190214555 14389509 14389508 14389602 94 TATATATACATATATATACATATATACACATA--------TATATACATATATATACACATATATA------TACATATATATATATGTATATATACACATATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..:.....x:.....:.........x.--------..:....:....x:.....:x:....------........x...:::x:.:.x.x.....:..:.... 32M8I26M6I36M 68/94 72.3% 108/94230402 0.0% 14/94 14.9% -58731593 -35498809 +3295 chr4 + 190214555 14389535 14389534 14389609 75 CACATATATATACATATATATACACATATATATACATATATATATATGTATATATACACATATATATATATGTAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x..::.::.:::.....:.....:.x..........x.x.:....:..:.:.x::...:.:x....:...:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -57240596 -36989806 +3031 chr4 + 190214555 14389634 14389633 14389725 92 ATATACACATATATATACGTATATATATACATATATATATACACATATATACGTATATATATACATATATATATACACATATATATATACAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.........:..::.:.:.:.x:x.:...:::..:x:x:.x.::..:.:...xx.x:...x..x............x...x..:.. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 9972291 NA +3033 chr4 + 190214555 14389646 14389645 14389737 92 ATATACGTATATATATACATATATATATACACATATATACGTATATATATACATATATATATACACATATATATATACATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x::.......:...:.:.:.:.x:x.....:::.:.x:x:.x.::....:...xx.x:..:x..x.....:......x...x..... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 9972303 NA +3028 chr4 + 190214555 14389654 14389653 14389739 86 ATATATATACATATATATATACACATATATACGTATATATATACATATATATATACACATATATATATACATATATATATATATAT chr4 - 94230402 4417349 4417348 4417434 89812969 89812968 89813054 86 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .:.........:.:.:.:.:.x:x.:...::.:.:x:x:.x.:..:..:...xx.x:...x..x.......:....x...x..... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 9972305 NA +3142 chr4 + 190214555 14389663 14389662 14389753 91 CATATATATATACACATATATACGTATATATATACATATATATATACACATATATATATACATATATATATATATATATTTGAGTTTCAGT chr4 - 94230402 71630131 71630130 71630221 22600182 22600181 22600272 91 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGT ..:x..::.::.::......:..::.:.x..........x.x.:..::...:.:.x.::.::.:x....:.:.:.x.x::...:....x.. 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% -57240468 -36989934 +3032 chr4 + 190214555 14409651 14409650 14409697 47 AAAAAACCAAAAACCAAAAAACAAAACAACAACAAAAAAACTTAAAA chr4 - 94230402 63770298 63770297 63770344 30460059 30460058 30460105 47 AAAAAAACAAAAAACAAAACACAAAACAACAACAAACAGACTCGAGA ......x......x.....x................x.:...::.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -49360647 -44869755 +4740 chr4 + 190214555 14438137 14438136 14438456 320 AAGAAGTTGTTTAATAGATGATGTCAGTTGAGCTTTTTGTCC-ATTTTCATGGACTAGGCAGCATCAGAAATACATTAAACTGCAGCATAATCAATGCCCAGGGATTTATTTATTTATTGCCCATTTTATA-----TGGAGGGAAGTGCGAAAGTACAGA---GAAAGACGAGATACCCTCGTCAGAATTAGAAATACGGCAACCCATCTCAAATAAAGCTATCACT------TTGGCTTCAGGGAAAGGCATTATTACTTAGCTGTGAGGGTTGATCTCAGTGGAGGTAAAATAGATTTTAAATTGACAAATGGTATCTCCCAGAAAAAACATA chr4 - 94230402 14232054 14232053 14232370 79998033 79998032 79998349 317 AAGTACCTGTTTTATTGAGAATATCACTTT-GCTTTTTGTCTGATTTTCAT-----------CATGTGCCATATGT---ACAGCAGT-TGATCAAAGCT--GTGAATGCATTATCTCTTGCCTCGCTTATCATTTCTGAGAAAAGATGAGAAGGAGGAGAAGGGAGGGACAGAAGATGATGATCAGAAATAGAAAAGTTTCAAAGTAGATCAAATAAGGCTGTCCGTAATTGTTCTCTTTTAATGAAAGGCATCATTAATCAGCTGTAATAGTGGCTAAGAGTGTTGGTGAAACAGCACATAAGCTGGAAAAAGCAGTCTCCAAGAATAAATGTA ...x.x:.....x..x..x:..:...x..x-..........:-........-----------...xx.xx...::.---..x....:-.:.....x..:--.x..x.xxx....:.x.....:xx:....x-----..:::::.::..x...:.x:x...---..::...:::.x.:xx.x:......x......x::xx...xx:.xx........:...:..xx.------.:xx:..:.:x.........:....x.:......:.x:..x.x.xxx....xx...:...:..xx:x...::..:x...x.xx:.....x....x...::.. 30M1D11M1I8M11D14M3D8M1D11M2D30M5I24M3I64M6I102M 192/302 63.6% 317/94230402 0.0% 33/302 10.9% 206083 NA +3120 chr4 + 190214555 14543381 14543380 14543439 59 GAAACAAGAGAAGACACAAACAAATGGAAAAACATTCCATCC--TTATGAATAGGAAAAAT chr4 - 94230402 13713212 13713211 13713272 80517131 80517130 80517191 61 GAAACAAGAGAAGAAACAAACAAATGAAAATCCATTCCATTCATTCATAAACATAATAGAT ..............x...........:...xx........:.--.:..:..:.x:.x.:.. 42M2I17M 47/59 79.7% 61/94230402 0.0% 2/59 3.4% 830169 NA +3048 chr4 + 190214555 14545822 14545821 14545870 49 AATAATAAAATATTATCTTTACAAACACAAACACACACACACACACAAA chr4 - 94230402 86322562 86322561 86322610 7907793 7907792 7907841 49 AATAATCAAAGATAATCTTCATTTTCACAAACACACACACACACACAAA ......x...x..x.....:.:xxx........................ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -71776740 -22453662 +3073 chr4 + 190214555 14549069 14549068 14549188 120 ATTCTGCACATGTACC-----CCAGAACTTAAAGTAAAAGAAAAAAAAAACCCACAACCCCCACCAAAAAAAAAAAGAAAAGCTCATCATCACTG-----GTCATTAGAGAAATGCAAAGCAA----AACCGCA chr4 - 94230402 78959734 78959733 78959864 15270539 15270538 15270669 131 ATTTTATAAATATAACACTTTCCATATCTGGAAGGAAAGGAAAAAAAAAACCC---ACCATCACCAACAAAATAAAAACACATGCATTCTCACTGCATTTGGCTTCAAAGTAGTAAAAAGGAATATGAACCGTA ...:.::.x..:..x.-----...x.x..x:...x...:..............---...x:......x....x...:.x.x::x...:x......-----.x.x.:.:..x.:.:x....x..----.....:. 16M5I32M3D39M5I23M4I7M 83/117 70.9% 131/94230402 0.0% 17/117 14.5% -64410665 -29819737 +5146 chr4 + 190214555 14552033 14552032 14552362 330 GTCTCAACTCCAGTGAAATGCTACCATTTCAATCTCATCTGCGAGAG--AGGCAAATGGAGGGAGGACAATGACTTTGGAGAAAGCTGAGAGCACCCCA------GCTGTCAAAGCGTGTGTGGGAGGCAGTGGATGGTTTGGGTGTCATCACATTAGCAATCTCTTGAATGAAGGGAAAAATGAAAAGGAAGTCTGGCTGCTTTGCGCCTTGAAAAGGAGCGGCAGTTGAAAGCA-----TTAAAATTAGATGCCATTTTGCTGAAGATCATGATTATTTAAAATGTCAG----------TTGTTTTCCCTAAAACTATCATTTATGATGGAACACAGTGAAGGATATCAAC chr4 - 94230402 14277364 14277363 14277707 79952696 79952695 79953039 344 GTATAAACTACGACAAAATGTCATCATTCAAATA-CAGCAGTAAAAAGAAACCAAATCCAAACACGA-GCTGACTACAGAGTATGTGGAAAACACCCCCCACTTTATCAGCAAATAGTG---GAAAAGTAGTAGATAATTCA--TGTCATAGCATACATAGTCTCTAGAGTCATACATTATTCATGGAAAAAGTC-ATCTACTTTGTGTCTTTAAA-GAAGACACATTAAAAAGTACAATGTTAAAAATAGATGGCATTTTATTGAAGATCATAATTATTTTAAAAGTTAGCAACAGGGCTTTTTAGTTCCTAAAATGACCTTTCAAGATGAAATGAAGAAAAGAAAAGCTAC ..x.x....x.::::.....::.:....:x...x-..x.x.::.:.:--.:x.....xx.::x.x..-:x.....x::...x.x.:x..:.:......x------::::x....xx...---.::.:.:...:...::..::--......x:...xx::.:.....x..:.x.x:x:xx.xx::x::.::.....-:x..:.....:.:...x...-.:..xx:..x.x:....:.-----......x......x......::..........:.......x...x..:..----------..x.xx.:.......:x.:.x..:.x....:..::x..x:...:.x.x.x.. 34M1D12M2I18M1D31M6I14M3D20M2D51M1D20M1D19M5I50M10I52M 199/321 62.0% 344/94230402 0.0% 32/321 10.0% 274669 NA +12718 chr4 + 190214555 14559648 14559647 14560082 435 TATTGCAGTAGAAAAATAATACTTTATCCTCATTTTTCTAGAGTGTCAAAAATGATAAATTTGAATATTTGTGGTAAACACTCAGC--GAAAATGTCAGAAACATTACTTCCTCAAGCCAGCATCTCATTGTCAGCTTTTTGTAATCAGTTTAACTTTTATTGAGGAAAAGGAACAATCACAAATCAGCCTTTTTGTGTCC-TTTGAATTCTTATGGCTGCAAATGAGGCTTCCAGCTGCGTCAATTTCATTTTGCAAAGGCACCATGTTGAATCATTAATTACCTAAGAAGGTACTGGATCCTTATCTCCTTCTGGTAACAAAATTTTTTATATATTATATGTATATACACAAATCAGATTGGAACCTGGAGCTATAAAGTCATCTTTTCTTA---AAATGCCATCTGCCAGATTTCACTTCAGAACATG-AGAAATCTTT chr4 - 94230402 14279459 14279458 14279873 79950530 79950529 79950944 415 TGTTACAGCAACAGGGTAATATTTTAACCTCTGTTTTCAAAA------AACACATCAGATTTTATAATTCATAGGAAACAATCTGCATGAAGAAG-AATAAACATGGCTTTAATGTAACAATATTGCATTGTTAGCTCCTGGTAATAGGTTTAATTTTAACTCAGGAAT-GCCACACAAACAAATCAAGCTTTTTGTGTCCCTTTGCATTCTTATGGCTACAAATGAGACTTCCAACAGCTTAAATTCCAGTGTATGGTGGCTGCCCATTGAATCATTAATTACCTAAGTAGGTAGCACAGTCTAGCTCCCTTCTGGTAGAAAAA------------------AAAATACATAAATCAGATTGAAACCCTACGCTGT-GGTTTGTATCTTTTTAAAGAAATCCCATCTGTTAGTTTCCACTCCAGAACGTTCAGAAATGCTT .:..:...:.:x.:::.....:....x....xx.....x.:.------..x.::x:.:....x.xx...::.:.x.....x..x..--...:.x.-x.x......x:...:xx::x:x..::..:x......:....::.x.....x:......:...x.:.x.....x-.xx...xxx........:x............-....x............:........:......:.x..x.x....:..x.x.::::x...xx.x::.....................x.....x::x.x:..x::::..........:x....------------------x.x.....:...........:....:x:x...:.-::x.::.x.:..:...---....x.......::..x..:....:......:.x-......x:.. 42M6D38M2I7M1D73M1D31M1I123M18D34M1D16M3I34M1I10M 282/408 69.1% 415/94230402 0.0% 34/408 8.3% 280189 NA +3077 chr4 + 190214555 14560836 14560835 14560910 75 TTTGAAATAAAAGAGAGGAAGAAAGAAAGGAAAGAAGGGAGGGGGGCAAAGAGAAAAGAAGGGAGGGAGGGAAGA chr4 - 94230402 69673911 69673910 69673985 24556418 24556417 24556492 75 TTTAAGATGTAATAGTGGAAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGAAAA ...:.:..:x..x..x....:...:..x.....x:.::xx:..::x:...:.:....:...:.......:...:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% -55113075 -39117327 +38531 chr4 + 190214555 14574400 14574399 14574936 537 CAGATAAAAAAAGTTTGTTA------CTCTGAGAATAAACTCAAGTGCATTAAGTTTATAGGCACAAGCAGGAGAATAAATCAATTTAACTCTATATCCCATCATTCTTTACAGGTTTGTAACAAGATGTACTTTGTTAGATTTTAATCTGTCTACATTTGAGACAGCAAAGCTCTCCACAATCATCTTTTAATGGCATTGCAATTTATAGACAGTAACTAATTTCAAACTTCATAGCACTTGGCTTTTATGATTATTTCAAATCATTTAAATGCAAATGAATTTCCAGAGCGAGAAAACATCAAATGCCCTTGAGTGGCACCATGTAATAGAACCATGCACGGAAGCCACTGTAGGAATCTGAAGCAGTTGGATAGGGTTGGGTGGTAAGACTGTATAAAAGTGTTTGCCTAAATCCAATTTACATTTCATTCCACATTATATTCTATTTACCCATTTTGTCATTTTAATACGACTTATTTACTTAATCCTCCTCTGAAATCCTATCCATTCTCCATTGCAAACGTAATATTTGAGTTAGGA chr4 - 94230402 14282822 14282821 14283364 79947039 79947038 79947581 543 CAGGCAAATGAAATTTTTTTTTTCCTCTTTCAGGAGAAACCCAACTATGTAAAGTTTATAGGCACTAGTAGGAGAATAAATCAATTTAAGTCCATGTCACACCATTCTTTACAGTTTTGTAACAAGGTGTACTTTGTTAGATTTTAATCTGCATACATTTGAGACAGCAAAGCTCTTCAAAATCATCTTTTAATGGCATCGCAATTTATAGACAGTAACTAATTTCAAACTTCATAGCACTTGGCTTTTATGATTATTTCAAATCATTTAAATGCAAATGAATTTCCAGAGAGAGAAAACATCAAATGCCCTTGAGTGGCAACATGTAATAGAACTGCGAGCAGAAATCACAGTAGGAATTTGAAGCAGTCTGATAGGGTTTGACAGGAGGTCTGTATAAAAGTGTTTGCCTAAATCCAATTTACATTTCATTTCACATTATATTCTATTTACCCATTTTGTCATTTTAATATGACTTATTTACTTAATCCTACTCTGAAATCCAATCTACTATCAAGAGCAAATGTGGAATTCTGGTCAGGA ...::...x:..:...x..x------..:.x..:.x....:...x.:::.x..............x..:....................x..:..:..x..:............x...........:........................:x.......................:..x...................:...........................................................................................x.............................x.............:::.x:.:...::...x........:.........:x.........x.:::.x.:.x.........................................:......................................:...................x...........x...:.:.x..x.xx.....:..::x...:x:..:.... 20M6I517M 467/537 87.0% 543/94230402 0.0% 6/537 1.1% 291578 NA +3018 chr4 + 190214555 14589817 14589816 14589871 55 TTTTTTGTATTTTTTTTTTTTTTTTTTTTTAGTAGAGACAGGGTTTCACCGTGTT chr4 - 94230402 35978801 35978800 35978855 58251548 58251547 58251602 55 TCTATTGTACTTTTTTTTTTTTTTTTTTTCAGTTAAAAGAGGTTTCTACTCTGTT .:.x.....:...................:...x:.:.x...x..::..:x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -21388984 -72841418 +7669 chr4 + 190214555 14595712 14595711 14595931 220 CACTTCTCTGAGGGAGACAATGAAAAAGTAT-----TTTAGCAAATGAAAGGTTCCATTTCTGAAAT-AATTAGCACTTCTCAATGTCAAGTTTGCTCATCTTATGAACAGTTCTATTATTAACATACAGAAAGCTAATATGAAAAGCA--CATTCTTATGTTAATTATCTAATTAACTAATCCAGGCACAATTAAGCCACTAAATTCACACAGTATTAATTTTTCTT chr4 - 94230402 14298424 14298423 14298648 79931755 79931754 79931979 225 CATTACTCTAAAACAAACATTGAGAAAGCACAGCACTGTAGCAATTAAAGGTCCAAATTTGCAAAATTAATTAGTGTTTCCCACAGCATAGC--ACTTTACTTATGAACAGCTCTATTGTAAATGTACGATGCTCTAATATGAAAAGAGAGCATTCTTATGTTAATTATCTAATTAACTAATCTGGGCACAATT-AGCAGCTGAAACAGCACAGCATCACGCTCTCTT ..:.x....:.::x.:...x...:....:.:-----.x......x.:..:.x::xx....x::....-......:::...:..xx.:xx..:--:..:xx...........:......:.x..::...::x:xx.............x:--................................::.........-...x:..:..x:x:.....:..:.xx:.:.... 31M5I31M1I24M2D55M2I43M1D33M 152/217 70.0% 225/94230402 0.0% 11/217 5.1% 297288 NA +3061 chr4 + 190214555 14614576 14614575 14614625 50 AGACTCCATCTCAAAAAACAAACAAACAAACAAACAAAAAAAAAAAACAG chr4 - 94230402 38453246 38453245 38453295 55777108 55777107 55777157 50 AAGCCTTATCTTAAAAAACAAACAAACAAAACAACAATAACAAAAAACAG .::.:::....:..................xx.....x..x......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -23838670 -70391732 +3006 chr4 + 190214555 14614585 14614584 14614634 50 CTCAAAAAACAAACAAACAAACAAACAAAAAAAAAAAACAGAGTTGTTTC chr4 - 94230402 81661607 81661606 81661656 12568747 12568746 12568796 50 CTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTTC ..:......x..xx...............x............:x:x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -67047022 -27183380 +3218 chr4 + 190214555 14616836 14616835 14616935 100 AGAATATCAGGATCTGATAAAAAAAAGAAAAGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGAGGA chr4 - 94230402 12301166 12301165 12301265 81929138 81929137 81929237 100 AGAGTAATATGAGCAAATAGCTAAAAGAGAAACAAGTAAAGATGAGGAAAGGAGAGAGGAGATAGGATCTGGCATGGAGAGGACAAAAAAGGGATGATGA ...:..x:.x..x.x:...:xx......:..:x...x....:x:.........:..:::..:x.:.:xxx..x.x...:....x.::.....:.x..x.. 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 2315670 NA +3403 chr4 + 190214555 14617626 14617625 14617778 153 AATGTTGGAAAAGTTTAAAGGCAA----AAAATATATTATATATACACATACATATGTACATACATACATACATACATACATATGGTGAGGGAAGAAATACATTAATACTTTCCAGATCAAAAGGCATATTATTGGTTTAATATTTAAAATTACATC chr4 - 94230402 13735217 13735216 13735371 80495032 80495031 80495186 155 AATATAGGAATAGCAAAGAAGTAAGTATAAAACATGTTTTATACTTATATACCTTAGGGTATACACACACACATACATATGTAAAGGGGGAGAGCTGAAATATCTACATATTCCAGTAACAAAAATTGATCACT--CTTTATATTCAAATTGACACC ...:.x....x..:xx.:.:.:..----....:..:..x....:x:.:....x.xx.x::.....:...:.........::..x:.x.:.:..:xx:.x.:..:x.:.:x......xxxx...:::xx..:.:.--:..x.....:...x.x...:. 24M4I106M2D21M 92/151 60.9% 155/94230402 0.0% 6/151 4.0% 882409 NA +3203 chr4 + 190214555 14624994 14624993 14625083 90 TGGCGCCATGTCGGGTCACTGCAAGCTCCGCCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGATGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ....::.....:------..:..:x.:xx:x..:.::........:xx...x.xx.x........:..:.........:......x:... 12M6D72M 58/84 69.0% 84/94230402 0.0% 6/84 7.1% -3572120 -90658282 +3731 chr4 + 190214555 14637862 14637861 14637988 127 ATTTAACTATATATAGTAGATTTAACTATATATATAGTAGATTTAACTATA-------TATATATACATATATATATATATATATATATATATATATACATATATATATATATATATTTTTTTTTTTTTTGAGA chr4 - 94230402 8681861 8681860 8681988 85548415 85548414 85548542 128 ATTTACCTGTACAAAATAGCTTT-----TTGAAACAAGAAGTTTTACAACAACTAAAATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGA .....x..:..:.x.:...x...-----.xx.x.:.:x.::...x..x.:.-------.:x....x...:.x.:-.....x..........:...::...:.:...:.....xx.x.............x:... 23M5D23M7I16M1D59M 86/121 71.1% 128/94230402 0.0% 13/121 10.7% 5956001 NA +3056 chr4 + 190214555 14637920 14637919 14637988 69 ACATATATATATATATATATATATATATATATACATATATATATATATATATTTTTTTTTTTTTTGAGA chr4 - 94230402 71856851 71856850 71856919 22373484 22373483 22373552 69 ACCTATAATGACATGTATACATTTGCATGTTTATATATGTATGAAAATACATTTTTCTTTTTTTTGTGA ..x....xxx.:..:....:..x.::..:.x..:....:...:x.x...:......:.........x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -57218931 -37011471 +3345 chr4 + 190214555 14637932 14637931 14637984 53 ATATATATATATATATATATACATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681982 85548421 85548420 85548473 53 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTT .....x..........:...:..:.:.:...:.....xx.:............ 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 5956002 NA +4298 chr4 + 190214555 14639506 14639505 14639705 200 TTCTCTCTCTCTCTTTTTTCTCTTCTCTTCTCTTCTCCTCTCTTCTCCTCTCCTCTCCTCCCCTCCCCTCCTTTCCCTTTCCCTTTCCCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTT--------TCTTTCTCTTTCCCTTCCT----------TCCTTCTTTCC----TTCCTCTTTTCTTTTCAGACAGAGTCT chr4 - 94230402 28459067 28459066 28459288 65771115 65771114 65771336 222 TTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTCAGCCATAATTT ..:.:.:.:x..xx:...x:.x..x::....x.x.....:x...x.:......::......:xx.x:..x:....x..:.xx:.:.:.:.:::...xx:...:x.x.:..:..::...::x....:.:...:.::..xx....--------.:.:.:x..xx....x...----------..:..x...x.----.......x:::.......x..x.:.:. 143M8I19M10I11M4I27M 122/200 61.0% 222/94230402 0.0% 22/200 11.0% -13819561 -80410841 +3531 chr4 + 190214555 14639554 14639553 14639749 196 TCTCCTCTCCTCCCCTCCCCTCCTTTCCCTTTCCCTTTCCCTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCTTTCCTTCCTCTTTTCTTTTCAGACAGAGTCTCACTCTGTCACCAGGCTAAGGGAGGCTT-----CTCTTTTCAGGGATAC chr4 - 94230402 79478396 79478395 79478584 14751819 14751818 14752007 189 TTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTT---CTTCTGCCTTTATGTT-TTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTTTATATTGCCA--------GAGGTTTTCTTACTTTCTCCAGAAATGC .:...::.::.:x:.....:.xx...:x..:.:x....:.x...::.:......::xx:.:......:.---:....x:....x.x..-..x:....x:x..::.:.x.:..:....::.x:.x.:..xx:..x.:.:...x.x:...x:::.x:.x.:.::...--------....:..-----..:.:.:...::..:. 69M3D16M1D76M8D7M5I16M 108/184 58.7% 189/94230402 0.0% 17/184 9.2% -64838842 -29391560 +3078 chr4 + 190214555 14641733 14641732 14641775 43 TCTCTCTCTATATATATATATATATATATATGTGTGTGTGTGT chr4 - 94230402 33929365 33929364 33929407 60300996 60300995 60301038 43 TCTCCTTCTATATATATATATATATGTATTTGTGTGTTCGTGT ....::...................:...x.......x:.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -19287632 -74942770 +3261 chr4 + 190214555 14641737 14641736 14641788 52 TCTCTATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704275 19704274 19704326 74526077 74526076 74526128 52 TCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...xx...:.......::.......x.....:...x::.............. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -5062538 -89167864 +3489 chr4 + 190214555 14641739 14641738 14641796 58 TCTATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATT chr4 - 94230402 19704275 19704274 19704332 74526071 74526070 74526128 58 TCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTT ....x...:.......::.......x.....:...x::..............x:.x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% -5062536 -89167866 +3008 chr4 + 190214555 14641742 14641741 14641793 52 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704325 74526078 74526077 74526129 52 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ..x..x...:.......::...:.:.x.....:...x::............. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -5062532 -89167870 +3236 chr4 + 190214555 14641743 14641742 14641800 58 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATAG chr4 - 94230402 19704277 19704276 19704334 74526069 74526068 74526126 58 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGG ..x...:.......::.....:.x.....:...x::..............x..:x.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -5062534 -89167868 +3291 chr4 + 190214555 14641745 14641744 14641848 104 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATAGA----CATAGTCT-ACATATATGTATACATACATACATATATACATGTGTGTA chr4 - 94230402 48089497 48089496 48089605 46140798 46140797 46140906 109 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTA .:..x:.x.:......:.:........:....x.x........:.:.:.....:.x.----x.....x.-....x...xxxx.:.:.:x.:x..::.:....:.x.... 57M4I8M1I39M 71/104 68.3% 109/94230402 0.0% 5/104 4.8% -33447752 -60782650 +3308 chr4 + 190214555 14648356 14648355 14648428 73 AAAACTCTGTCTCATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAGAAGACTGTGGCA chr4 - 94230402 71314656 71314655 71314728 22915675 22915674 22915747 73 AAGTCTTCTTCTCTTAAAAAGACAAAGCTATTAATACAGAAATAAGTAGATAAATAAATAAAAGACAGTGACA ..:x..::x....x....x.:.:...xxx..x....x.x......:..:...........:.....x...:.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -56666300 -37564102 +3108 chr4 + 190214555 14649171 14649170 14649210 40 TGTGTGTGTGTGTGTATGAGACAGAGAGAGAGACAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...............:.....x...........x..:... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -4333144 -89897258 +8533 chr4 + 190214555 14669484 14669483 14669673 190 CAGATGTGTCCTCCCTAGGGAAGCTGCAGACAAACTTGATTAGCTCCCTCTTAATTGTCTATGAAATGCAAATGTGTCCCACTCACACGCCAGTGACATCCTTTGTCTGCTTCTGTGCAAGGGCCGATAATGCCAATTAAATGCCAAGGCTCACTTAACAGGTGTGCTGATTGCCACTGTGGGATGATTT chr4 - 94230402 14321428 14321427 14321617 79908786 79908785 79908975 190 CAGATGTGCCCTTGCTTGCCAGACTTCAGACAAACGCAATCAAATCTATTTTAATCATCTATGAAATGCAAATGTGTTCCACTTGCGCACCCGCAAGATCCATTGTCTTCCTCACTGAAGCATACGATAATGCCAATTAAACATTGTTGCTAACTTAATAGGTGTTCTGATTGCCTATGGGAAATCATCT ........:...:x..x.xx.::..x.........x::..:.:x..:x.:.....::....................:.....::.:.:..x.::.x....x......x.:..xx..x.:x:xx.................:::::xx...x......:......x.........xx..x.::..x..:. 190M 133/190 70.0% 190/94230402 0.0% 0/190 0.0% 348056 NA +7650 chr4 + 190214555 14671232 14671231 14671615 384 GATGACAGGCCCTGCTGCTCTCAGACAGAGCTGCAGAGAAGCCTGCCCATAGACAATTTTCATTTCAAAGCTCAAACATGAAAAGCACTCCCTTGCTGGGTAAATGAACCC---ACTGTTTTCTTGCTAAATCAAGCTCTGTTGAAGGGAAGCTGGAGAATGAAATTGGCAAAAGAATTGAGGAGATGGGAAGTGGAAAATAAAACTTTGATCGTTTCTTTTTTTTTTCTTTTTCATTTTCTCAGCTAAGCTTAACTTGACTGAATAAATAAACTGTGTTTTCCTAAAATGCATTGAGAAAGGCGACTATCAGAAAGGGCTTATTCAAAGATGAGGTCTGATGT-TGGTGGCCCTTGATCTAAC-CTAAGTGGCTAATTAAAGCGCTTA chr4 - 94230402 14322153 14322152 14322506 79907897 79907896 79908250 354 GATGACAAGCAA-GCAGTTATCTGATAGAGC---AGATATTTGTTCCAAAAGACGATTTTCATTTCAAAGACAAAACATGAAAAGAGCTTACTTGTGGGGAAACCAAATACTGTATTCTGCTCTTGATAAATCAAGCCTTAGAGAAATAAAGCCAAAGAG----------AGCAGCATTCTG----------------AAAAGAACTTCTGTAG---CTCTTTTCATGCTTTTTCAGCTACTCTGCT-GGCTTAGCTCTGCCAACTAATAATCTCATGTTTTCCTAAGATGTGTTGAGAAAGA-GTTTATTTGCAAATAATTATTTAGTGATAAGGATGCATGTCTGTTTGCTTTTAAACAGACTCTACAAAGCTAATTAGAGGGCTTA .......:..xx-..x.:.x..x..:.....---...x.xx:x.x..x.x....:...............x:x............x:..:x....:x...x..x::..:x.---.:.x.x:.....x..........::.:xx...:x:....:::...:----------.:x..x...xx.----------------..x.:.....:x:.x.---..:....:x.x........x:.x...x...-:.....:..:x:.::.x...xx.xx:::...........:...::.........:-.x:...:x.x..:x:x.....:.:x...:...x:xx....-..x.x..::..:.x.x:..-...x:x:........:..x..... 12M1D18M3D77M3I46M10D12M16D16M3D30M1D55M1D40M1I19M1I24M 231/349 66.2% 354/94230402 0.0% 40/349 11.5% 349079 NA +3066 chr4 + 190214555 14684236 14684235 14684306 71 TAGTAGA--TTTTCTATTTATTTATTTTATTTATTTATTTTTTTTTTAATTTTTTTTTTTTTATTATACTTTA chr4 - 94230402 19936088 19936087 19936160 74294243 74294242 74294315 73 TAGTAGAAATCTTCTATTTTCTTATTCTGATTATTTATTTTTCCCATTATTTTTCTCTCATTGTTAAATATTA .......--.:........x:.....:.:x............:::x.x......:.:.:x..:...x.:x... 7M2I64M 52/71 73.2% 73/94230402 0.0% 2/71 2.8% -5251852 -88978550 +3176 chr4 + 190214555 14687832 14687831 14687897 66 AATGAATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398808 33398807 33398873 60831530 60831529 60831595 66 AATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ....x..x..x.x:.:.:::.:.:.:....:.:.......x.x.............x.....x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -18710976 -75519426 +3167 chr4 + 190214555 14687842 14687841 14687918 77 TATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAGAGAGATTATA chr4 - 94230402 33398822 33398821 33398898 60831505 60831504 60831581 77 TGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaactgttgaatcata .:.:::.:.:.:....:.:.......:.:.............x.....x...x.x:x.x:.:...x.xx::..:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -18710980 -75519422 +3989 chr4 + 190214555 14696782 14696781 14696855 74 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCTGGCCTCAGCCTCCCAGGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::..........x...x.x..x........::..:........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% -3500344 -90730058 +3100 chr4 + 190214555 14715819 14715818 14715860 42 GGGGAAGCAAAAAAACAAAACAAAAAAAAACAAACAAAAAAA chr4 - 94230402 4159748 4159747 4159789 90070614 90070613 90070655 42 GGAAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAAA ..::..:.......x...........x............... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 10556071 NA +3319 chr4 + 190214555 14715824 14715823 14715900 77 AGCAAAAAAACAAAACAAAAAAAAACAAACAAAAAAAAAACCAGAAACGTGTGGGTTTGTTTTGTTTTCTAAGAAGA chr4 - 94230402 275072 275071 275148 93955255 93955254 93955331 77 AGCAAGGGAAAGAAACAAACAAAACCAAGCAAAAAAGGGGCGGAAAAAGTGTTGTTTTTTTTTTTTTTTAAAGGAAA .....:::..x:.......x....x...:.......::::.x::...x....x.x...x....x....:x...:.:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 14440752 NA +3020 chr4 + 190214555 14717683 14717682 14717730 48 TTTTTGGTATTTTGTTTCGTTTTGTTTTGTTTTTTGAGACAGAGTCTT chr4 - 94230402 39249779 39249778 39249826 54980577 54980576 54980624 48 TTTTTGTTATTTTTTTTTCATTTGTTCTGTATTTTGAGACAGAGTTTT ......x......x...:xx......:...x..............:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -24532096 -69698306 +3036 chr4 + 190214555 14731561 14731560 14731633 73 TCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAGAGAGAGGGAGAATAATACTGGTTTTGACATT chr4 - 94230402 48787418 48787417 48787490 45442913 45442912 45442985 73 TCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAAGAAAGAACTCACTGAAGAAAACTACTGCCTCTGCCATT .....:.x:x.................x..x....:.....:xxx:xx.:....x.x.....x:.:..x.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -34055857 -60174545 +3132 chr4 + 190214555 14740953 14740952 14741023 71 GTAAGATGCTGTCTCAAAAAAAAAAAAAAAGAAAAAAAGAAAATCATTCATTTTTCCCTTAGTGTCCTGTC chr4 - 94230402 91143428 91143427 91143498 3086905 3086904 3086975 71 GCATGAGGTTTTAACAATAAAAAAAAGAAAGGAAAAAAGAACATTATTTTTTTTTACTTCAGTGCTCAGCC .:.x..x.:.x.xx...x........:....:.........x..:...:x.....x.:.:....::.x.:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -76402475 -17827927 +3767 chr4 + 190214555 14778343 14778342 14778436 94 AATCACCCTTTGAAGAAAGTA-TTATTAACCCCCCTTTTTTACAGATGAGGAAACTGGAGATTGAGAGGGGTTACATAATTTGCTCCAAGTTATA chr4 - 94230402 80987836 80987835 80987930 13242473 13242472 13242567 95 AACCCCCCTGCGAGGTAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACA ..:.x....x:..:.x.:...-x..x..::x:....x...........:........::.xx.x....:..:...:.:.:....:.x.:..:.:. 21M1I73M 64/94 68.1% 95/94230402 0.0% 1/94 1.1% -66209493 -28020909 +3434 chr4 + 190214555 14836978 14836977 14837146 169 TAATGTATATATAATATATTATATATAGTATATATTATACATATAATGTATATATTATATATAATGTATATATAATATATTATATATA-ATGT-ATATATATTATATATAATGTATATAT-AATAT---ATTATATATAATGTATATATATTATATATAATGTATATATATTATA chr4 - 94230402 67910059 67910058 67910224 26320179 26320178 26320344 166 TATTACATATACAATACTAAAAATATA----CTATTAGATACATAATAAATATATTGTATATA--GTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGAT-TAAATATCAACATTTGAATACATATAA-GAAAATATTTTATTAATGACACAC-TACATTACA ..x.::.....:....:xxx.x.....----x.....x.:.:.....:x.......:......--.............:.x:......-....-.x...x...xx.xx.:..-..x....-..:..---.x..:......-.x.x....x....xx..:.:::.:-..:....:. 27M4D32M2D23M1I4M1I18M1D7M1I5M3I11M1D24M1D9M 118/160 73.8% 166/94230402 0.0% 15/160 9.4% -53073081 -41157321 +3167 chr4 + 190214555 14858441 14858440 14858502 62 AAATATATTTATATAAACAACTTTATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964823 14964822 14964884 79265519 79265518 79265580 62 AAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......:...:::.:x:..xx:x.:...:........xx........::............. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -106382 -94124020 +3287 chr4 + 190214555 14858444 14858443 14858518 75 TATATTTATATAAACAACTTTATATATATATACACACACACACACACACACACACACACACACACACAACTACAT chr4 - 94230402 8395795 8395794 8395869 85834534 85834533 85834608 75 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ...:.x.::.......xx.x.x..:....:..::.x:...:xx.:.................x......x.:x.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 6462649 NA +3108 chr4 + 190214555 14858447 14858446 14858499 53 ATTTATATAAACAACTTTATATATATATACACACACACACACACACACACACA chr4 - 94230402 21704657 21704656 21704709 72525694 72525693 72525746 53 ATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ....xxx..:.x...:..........:...................::::.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -6846210 -87384192 +3108 chr4 + 190214555 14858447 14858446 14858499 53 ATTTATATAAACAACTTTATATATATATACACACACACACACACACACACACA chr4 - 94230402 21701084 21701083 21701136 72529267 72529266 72529319 53 ATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ....xxx..:.x...:..........:...................::::.:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -6842637 -87387765 +3123 chr4 + 190214555 14909533 14909532 14909600 68 CATGCTTTGAGTATATATACACACAAACACATAC----------ATACCTATATTTATACACACACACACACACACAC chr4 - 94230402 8395782 8395781 8395859 85834544 85834543 85834621 78 CAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGAC ..x..:x..x..:...:.:::..:.....::..:----------..:....:...x...................x.. 34M10I34M 51/68 75.0% 78/94230402 0.0% 10/68 14.7% 6513751 NA +3622 chr4 + 190214555 14914751 14914750 14914845 95 TATAGCATATATAGTA-TATATACATGCTAT---ATATATAGCATATATAGTATATATAATATATAGCATATATATTATATATATGCTATATATACCTA chr4 - 94230402 67910059 67910058 67910157 26320246 26320245 26320344 99 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTA ...x:......:.:..-..x.x.:..:....---...:...::.x.....x.:......:......xx....:..x......:...:x.x...x.::.. 16M1I14M3I65M 69/95 72.6% 99/94230402 0.0% 4/95 4.2% -52995308 -41235094 +3372 chr4 + 190214555 14914806 14914805 14914893 88 ATATATA-GCATATATATTATATATATGCTATATATACCTATATATGATATATAAGCTGTATATATAGATATTATATATATGCTGTGTA chr4 - 94230402 1076897 1076896 1076984 93153419 93153418 93153506 88 ATATGTATGAATACAT-TTGTATATATACTGTGTTAGCATGTATACTCTGTATACCCTGTGTATATAGTTTATACATATATGCTGTGTA ....:..-.x...:..-..:.......:..:.:.xx:.x.:....:xx.:....xx....:.......x.xx..:.............. 7M1I8M1D72M 64/87 73.6% 88/94230402 0.0% 2/87 2.3% 13837909 NA +3872 chr4 + 190214555 14932091 14932090 14932198 108 AATATATATTTT--------ATATATAT-AATATATATATTATATATATATATACACACACACACACATACATACACATACCATTCCTATGACAAAAAGAGTCATTATAGGTAATAA chr4 - 94230402 21908430 21908429 21908545 72321858 72321857 72321973 116 AATCTACATTTTTTTCTGAAATATATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACAGCACTATTCTTAC-TAAAGTTTCATTATTTATAACAA ...x..:.....--------........-..x..:..x..:.x........:..:.............:....xx...:.x..:.x:.x.x..-x....xx.......xx:...:.. 12M8I8M1I64M1D23M 81/107 75.7% 116/94230402 0.0% 10/107 9.3% -6976339 -87254063 +3385 chr4 + 190214555 14948788 14948787 14948894 107 ATTCTTCAAA----TCTTTCTTTACTTCCTCCCTTCTTTCCCTCCCTCCCCCCTCCCTTCTCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT chr4 - 94230402 43081912 43081911 43082026 51148377 51148376 51148491 115 ATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGT ..x.......----.x.::..::x:.....:::..:.:..:.x......x:x:...x..::xx:...----:...x.:...:...............x.xx..:::...:..... 10M4I53M4I44M 71/107 66.4% 115/94230402 0.0% 8/107 7.5% -28133124 -66097278 +3150 chr4 + 190214555 14960231 14960230 14960307 77 TATATATATACGTATATATACATATACGTATATATATACACATATATACATATAAATACATATATATAAATTTATAT chr4 - 94230402 88029583 88029582 88029658 6200745 6200744 6200820 76 TATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATA-GCATTAAAAAATTCACAT .....x...::..:x.x.....:.x..:..:...x............:..:.x.....-::..xx.x.....:.:.. 58M1D18M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% -73069352 -21161050 +3171 chr4 + 190214555 14977695 14977694 14977760 66 CCATATATATATATACACATATATATACCATATATATACATATATATACACACATATATATATACA chr4 - 94230402 6951621 6951620 6951686 87278717 87278716 87278782 66 CTACACATTTATAGTCAGCTATTTCTATCATATATATATACACATATACACACGTATGTATCTGCA .:.:.:..x....xx..xx...x.x..:..........:.:.:..........:...:...x.:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 8026074 NA +23514 chr4 + 190214555 15007295 15007294 15007725 431 TTTTCCCTAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCAGTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGAATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATTTACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTAATACACTCTTACCCTTACAGGTAAGAATGGTATGTAAATGACCT---------------TATCTCTAATGTTAATCTTTCAAAATAGGGAGTTGGGTGGTGGTGGTAGTGGT-ATGCTAAAATTAACATT--TTTTGAAATAAAGTTTTAATTTTTAAGCATGTAATTTAATTAACA chr4 - 94230402 14408885 14408884 14409322 79821081 79821080 79821518 438 TTCTTTTTAGCCTCTTCTGAAGCAGTCACCCTGGAGCAA---TCAGAGTAGTGGCTGGAGCACAGGAAATATATCCTGGGGAGGAATGCATGGCAGAGACCATCGTAGAACTGGAAACATGGGAATTCCAGGAACTATGAACCAGATCTCTCCTTTGAAGAAACCCTTTTCTGGTAATGTCATAGCTCCACCTAAATTTACTCGCTCCACTCCATCACTGACTCCAAAATCATGGATTGAAGATAATGTTTTCCGAACTGACAACAACAGTAATACTCTCCTTCCCTTGCAGGTAAGGATGGTATGTAACTGGTGTATTCATAGTCCCGTGTAGCTTTTGTCTGCATTCACTAAAGTA--GAGTTCAGCAGTGGTAACTGTCCTGATACTCGGTTTGAAATTTGTGTTTATGTATAGTTTTTACTCTTAAATA------TCAACTAACA ..:.:::..............:.....x...........---......:.........:....x....:...:..........x...............:...........:..............:..............:.....x.....x...........x....................x.....x..............x.......................x.................x...x....x........:........x...:.x.....:........:...........x..::x.---------------..x..:.x:.x.xx..::x::...:..--.....x:.::.....:::x..xx.-..:..x::x..:.x...--.x..x.x:..x......x.:.:....::.------.:..:..... 39M3D274M15I27M2D24M1I17M2I29M6D10M 342/420 81.4% 438/94230402 0.0% 29/420 6.9% 598410 NA +4184 chr4 + 190214555 15010496 15010495 15010600 105 TAGTTTGTTGTGTGTTTCCATCTTTCCATAAAAGGTTGAAGTATTTGAAGTTGAGCCTCTTAAAAATACAGCAGCAGCTACAAAATGAAATTGATATCTTAAAAT chr4 - 94230402 14411417 14411416 14411514 79818889 79818888 79818986 98 TAATTTGTACTGTGCTTGTCTCCTTCCATAAAAGGCTGAGGTATTTAGATTGAGGATTCTTAAAGATACAGTAGCCGTTTCTGAA-------GACATTCTAAAAT ..:.....xx....:..x:x..:............:...:......::.x.x::.x:.......:......:...x.:.x.x:..-------..:..::...... 85M7D13M 70/98 71.4% 98/94230402 0.0% 7/98 7.1% 599079 NA +3515 chr4 + 190214555 15011176 15011175 15011257 82 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCCAGTAGCTGTGATTACATGCATGCACCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:..:..:xx:x..:.:.........:.x...x..x.x........::.x........x:.:....--.:........::. 67M2D13M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% -3185950 -91044452 +8890 chr4 + 190214555 15017135 15017134 15017299 165 CTTTTTGAAAAAACTGCATAGATTATAATGTCTTTTT-----TCCTCTTCTCTTCCAGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTCTTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTAGGTGACTTTTTAAAAAAA chr4 - 94230402 14419872 14419871 14420041 79810362 79810361 79810531 170 CTGTTAAAAAAAAGTATAGAAATTGTATTCCAATACTAAGGATTTTGTTCTCTTTTAGGATCGAAATAGAATGTATGACAGTCTGAATATGCACTCTTTGGAAAACTCCCTTATTGACATTATGAGAGCAGAGCATGATCCACTTAAAGGTATGTTATTATGCTAAATAA ..x..x:......x.::.x.:...:..x.x:xx.x:.-----.::.x.......::.........:................:......................:........:..:.......................x.....:....x..x.:.x.x:x...x.. 37M5I128M 129/165 78.2% 170/94230402 0.0% 5/165 3.0% 597263 NA +3253 chr4 + 190214555 15018906 15018905 15018974 69 AATGGAAGCATTATAAGGCTAAGGGGAATTTTATATATATATATATATATATATATATATATATACACA chr4 - 94230402 15394942 15394941 15395010 78835393 78835392 78835461 69 AATGCTAGCATTAACAGACTTCCGGGAATTAAATATATATTTCTGTATCTATTTATATATATACACACA ....xx.......xx..:..xxx.......xx........x.x.:...x...x..........:..... 69M 53/69 76.8% 69/94230402 0.0% 0/69 0.0% -376036 -93854366 +9807 chr4 + 190214555 15032883 15032882 15033245 363 AAAAATAAATAAGCTTTATTCTATTGGCATTGCTCCCAAATCACATTGTAT-TCTTATGATCTAGGAACTAAGGTTAA-----CTTTTTGTTTTGCTTTCAACTT---CCAAAGATAATTTTAGTTAATATACTTTTAGTTGAACATAAGCTTTTTAGTTC--TTAAGAAATATACTGTGCTCAATA-ATTTTCTCTTTATGCTGCCTTTGTTGTTGTTTTTTGTTTTTTTGTTTT-----TGCTTTTCA-----------AATAACTCCATAATC-------TTCAAACTCACCTTTCCTGTCTTTTTAAAGGTCGATTGAGCTATCCACATCCAGGAACTGACAATCTGTTGATGTTAAATGGTAAGTTTTATAAAAACATTTTAT----GTTTCCAGTT chr4 - 94230402 14428244 14428243 14428630 79801773 79801772 79802159 387 AAACAAAAAGTGGCTTTATCCTATTGGAGCTGATCCCAAAGCACACTGCAGATCTTATGACCAGAGAATTAAGGTTAAGAAGTCTGTTCTTGTCAGCTTTAACTTGGGTCAAGGGTATTGTTGGTTAATGTGCTTGGAGTTAAATATTAGCTCTTTATTTCCCTTAGGCAA---ACTGGA---AATAGAGTTTATATTTAAATT--CTAAGAAGCAATATTTCATTTCTTTGTTGTATTATTATTTTCTAGCATAATAACTAATACCTCTGCATTTGCTTTGTTTTATTCTTTCCTTTTTCCTTTCTTCTAAGGTCGCTTGAGTTATCCACATCCAGGGACTGACAATCTTCTGATGTTAAATGGTAAGTGCTA-------ATCTTATAACAGTTTCTAATT ...x.x...xx:.......:.......x::..x.......x....:..:.x-........:.x::...:.........-----..x..:x.x.::x:..:.....---:...:.:..x.x..:......:.:...xx....:..:..x....:....x...--...:.x..---....x:---....-.x...x.x....x::.--..xx.xx.:x:.x...::...:......x.-----.::...::.-----------....x...:::.x.:-------..:.xx..:x.....:::x.:.:..:x.......x.....:..............:...........x:..................x:..-------..:....----.....:.:.. 51M1I26M5I22M3I53M2I8M3D6M3D4M1I16M2D30M5I9M11I15M7I91M7D7M4I10M 250/348 71.8% 387/94230402 0.0% 54/348 15.5% 604639 NA +11063 chr4 + 190214555 15040374 15040373 15040573 200 CCCACATAGCTTTTCGTATCAGAAATATTTGTATATGTGGGCTTA------TTTTTAGTTCTGACATTTTACAATTTGTGCTTTGTTTACATGCAGCAAGGAGTTATGGGCGAAGACGAGGTAATTCATTTCTGTTTGCTATGGTATAATTGTTTCTAATGGGGT--TTACTGATCAATGTTGTAATTAATTACTCTAGATTTTTCAT chr4 - 94230402 14434467 14434466 14434666 79795737 79795736 79795936 200 CCCACATAGCTTTTTGTATGATAAATATTTTAATATGTGGGCATAACAGAGTTGTT-----TGACATTTGACAATTTGTCCTTTGTTTACATGCAGCAAGGAGTTATGGGCGAAGACGAGGTAACTCACTTCTGTTTGTTACAGTACAGTTAATTCTGACGGAGCTGTTACTGATCC---TTGCGATTAATTAATCCAGATGTGTTAT ..............:....x.x........xx..........x..------..x..-----........x.........x............................................:...:.........:..::...:.:..:x....:.:..:.:--.........x---...::........x..:....x.x.:.. 45M6I5M5D104M2I10M3D28M 162/192 84.4% 200/94230402 0.0% 16/192 8.3% 605907 NA +13195 chr4 + 190214555 15052392 15052391 15052586 195 TTGTATTTGTTCTTTATTCTAGGTCGTTCTTCCCTCTTTCCAATAGATGATGGCTTGCTTGATGATGGTCACAGTGATCAAGTTGGAGTTTTAAATTCACCCACCTGTTATTCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATATTGATGAAGGT chr4 - 94230402 14438096 14438095 14438290 79792113 79792112 79792307 195 ttttattttttttctttttaaGGCCGTTCTTCCCTCTTCCCAATAGATGATGGTTTGTTGGACGATGGTCATAACGATCAAGTTGGAGTCTTAAATTCACCTACCTGCTATTCTGGTCATCAGAATGGGGAACGAATTGAGCGTTTTTCTCGGAAGGTGTTTGTTGGAGGTCTTCCACCAGATATTGATGAAGGT ..x.....x..:.:.x..:x...:..............:..............:...:.x..:........:.::..............:...........:.....:.....x.x...:..:.....:..:.....x..:..:..:.....:..:..x........x........x.................. 195M 161/195 82.6% 195/94230402 0.0% 0/195 0.0% 614296 NA +9207 chr4 + 190214555 15054098 15054097 15054227 130 TTCTAATGTGTATTATTGTA-CTTTCTTAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAAGCAAGTCCTATTTTCCACCAAAAGGTAAGGATTG chr4 - 94230402 14439656 14439655 14439786 79790617 79790616 79790747 131 TTTTAATTTCAACTGTTACATCTGTTTTCAGATGAAATTACTGCTAGCTTCAGACGATTTGGGCCTTTGGTAGTAGATTGGCCTCACAAAGCAGAAAGCAAGTCCTATTTTCCACCAAAAGGTAAGAGTTG ..:....x.xx.:.:..::.-..x.:..x.........x...............x...............................:.......................................::... 20M1I110M 114/130 87.7% 131/94230402 0.0% 1/130 0.8% 614442 NA +12600 chr4 + 190214555 15058412 15058411 15058673 262 TTATTCCAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATTGATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTAAGTAAATACCACATGAACTTCAGGCTACAAATGCAAATTTTTCAAAAATTGTTTTGAAATGATTGTTAATTAATAAAAGAACAATTAAACTACCATGTTGAGT-TTTAGTTTTTGAAACATCCAGATAATTT chr4 - 94230402 14446596 14446595 14446857 79783546 79783545 79783807 262 TCACTCTAGGTTATGCATTCCTCCTATTCCAAGAAGAGAGTTCTGTCCAGGCACTGATTGATGCCTGTATTGAAGAAGATGGAAAGCTCTATCTATGTGTTTCCAGTCCTACTATCAAGGACAAGCCAGTAAGTAAACAGTAGATGGCCTGGAGGCTATAGCTGCCATCTGTCTAAAGCTGCGTTTGAAATGA-TGATGATGAAAATAATCAACAGCAAACTACCATTGGCAGCACTCAACATCTGGAACAGTCAGATGACTT .:.:..:...:........:..:..x..:...........:..x..:........x........:....................:........:........:..:.................:............:.x:.x...:x..xx......:.:x...x.x:.x.::...:x.xxx..........-..x.:..x..x.x..xx.xx.x:..........xxxx..:-:.:.::x.:..:....x:.....:.:.. 193M1D40M1I28M 194/261 74.3% 262/94230402 0.0% 2/261 0.8% 611816 NA +10004 chr4 + 190214555 15059169 15059168 15059332 164 ATGTAATTTTCTTC-------ATAGGTTCAAATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAATTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGGTAAGTAGAA-----TGTTAACAATTTTGTTTAAAA chr4 - 94230402 14446992 14446991 14447167 79783236 79783235 79783411 176 ATGTCATTTTCTTCCCATTTAATAGGTTCAGATCCGTCCCTGGAATCTAAGTGACAGTGACTTTGTGATGGATGGTTCCCAGCCGCTTGATCCTCGAAAAACGATTTTTGTTGGAGGAGTCCCTAGACCGTTAAGAGCTGGTGAGTATAAATTATTATAAATTACTCTCTTTAAAA ....x.........-------.........:..x.....:......:.......:.....:.....:...........:.....x:.x.....:........:..............x..:.....:..:.....:......:....x..-----.:.x..:x.:.:.x....... 14M7I129M5I21M 136/164 82.9% 176/94230402 0.0% 12/164 7.3% 612177 NA +15794 chr4 + 190214555 15062047 15062046 15062272 226 ACATTTGATGTAAACTTCTTTTCCTTTTCAA---GTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGAGTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAATCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTAAGTTGCATA chr4 - 94230402 14449124 14449123 14449352 79781051 79781050 79781279 229 ACAGTTCAAGTGAACATTGTTTTGTTTCCTAATAGTGGAATTGGCAATGATCATGGACCGTCTGTATGGTGGAGTTTGTTACGCAGGAATTGATACTGACCCTGAGCTGAAATACCCAAAAGGTGCTGGACGCGTTGCTTTTTCCAATCAGCAGAGTTACATTGCTGCCATCAGTGCTCGGTTTGTTCAACTTCAGCATGGCGATATAGATAAACGAGTAAGTTACACA ...x..x.x..:...x.:x...:x...:.x.---......:.x..x..............x....................:..............x..:........:....................:..x........:..............:..:...........:.................:...........:.....x........x.......:..:. 31M3I195M 195/226 86.3% 229/94230402 0.0% 3/226 1.3% 612923 NA +277285 chr4 + 190214555 15066151 15066150 15070209 4059 AGGTGGAGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCTCCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGCTGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGGAACTAAGAATAGCAAACTGGCCTCTGTTTAACAAGGAAAGAAAGGGTGCATGTGGCTTACTGTGTCTGAAGATACTGACATGCAGAAGAAATAAGTGCATTCTTCTGCTTTTCACCCCAGCTATCAATACATGCATCTTTATCAGCAGCCAAAACACTACAAGCCTCTTGTTTTTCACCAAAACCCTACATCTCAGGCTTACTAATTTTTGTGATATTTTCATGTTCAAATAAAATGTTTTTTTGTATTTTCTCCAAGTTATTTTTATATGTAAAGTTAAAATTAGATATGAGAATGTTTT-GCGTAGGGGCAACACAGTCTGCTGCTATAT--AGTGGGGGAAGCGTGCACTTATTTCTAAACATGGGTTTTTAACTTCAAGATCTGCCCCAGTAATTTACCAAAGGTAGCAAAATAATAGTGAAGATGGAATATGTCTGCTACAAAT-GCTTATTTTTATTGTTG---CTATTTTCAGTGTATACATAAACTAAAAATTAGGGTTGATTTTTTTGCTCTCCATTTTGACTTGCAAGAAATAATACCTCAAGATAATCTGATTTATTAGCTATTTTTAAACATTTTTAATCACAAGCTGTATTAGCTTTGCTGCTATATAGGTGTTATGTGTAAATGCCACCTATTAATACGGGACTGAAAACGTTAGAGACACACTGCATTGCAGATAAAATGCAGGCAGCACAATATGGCCTAAACTGCCATAGTTTTAGAATGTGAAAAAAATGCATGTTTACTTACCTGTATACACCATATGCATGCACTAGAATTATTAACTAAC--GAGGTGAGGTATTGCAAATGTTCAAAAAAG-CTCTCTTGAATCTAGGTAGCATGAACAAATT-ATAAAATTTGTTTAAAAAAGCAAACTTGCATGCATTATTGTGACTTCAAGTTTAAAAAATCGTCTTACATGTGTACAATATGCAAATTAGTTTTAGATTAGAGAGTGCAGCCATTTTGTGATCTGGTCAGTAGTGGAATTCGATTTTATGCAGACTGGATGTAATATTTGTAATCCCTGTGCAATTTTGTGACGTGCGGTTCTAATTCATGTGCAGTGATATAGTATAGATAAAAGAATGAGTAAAAGAAAATACAAGAATTCTAAAGAAAGTTGGTTTTAGCCCCTTTGATAGTCCATGGTTAAGACATCCTTTATAAACCAAAGATGGCCAGCACACTGCTAACCAGTCACCAAATGTAAGACCCATAAGAAACCCATATTTAAAAATCTGAATTTTTTAGAAGAATGC--AAAACTTTAG---TAAACCCTAAGTAAAGTCAAAATGGAGAAGGGGAAATATACAGATGGCTAGTTGCATAA--AATTAAATTTTACCTTTATAAGACAATGGTGAAATCTGGCTTGAA--CTTGCTTATGTGTTTAACCTATAAATATTGGGGTCTTCTGTCTAAACTGGGGTCACTGTTGCATGGAACATTGTT-CTTAATAGTTGAGAATTGCTTTTTTGAAAATTTTCATGAAGGAATTTTGGTAATGACTTTGCTTGCAGGTTTTTTGGGGTGTTTTGAGAAAGTGGCAT--GGAAACATGCAGTAGTTAATGAGTTTCTCTTGGTACTGAACACTATTAGAATATCATTAGTGATATTT---TTTCTCTTTAGAGCATTTTTAATGCAACTAGCCCCTATATTTTAATGTAAGA--GTTACTCTGCAATCTAAGCAAAGCACCCAACAATGGTAAATGTTTTTTAAAAATGCAGAACTAAGATTTTTGACTCTAAAGAGAGAAAATTACAAGGGTGTTGCCTTATAGCAAACCCTTGGGACAATCCTTCATGTGAGCAAAGTGTTGATCTTAATATTGGTTGTCTGTGGTGTGCTTTTTTGTACTGTAAAAATATGTGGTTCATGTCTAACTCTGCTGTTTTATTGTGGTTGTGGTTCAAGTTTTTAATGTTTAAAGTTGATGCTGTTTTCAGAAGAGCTTTTTACTAATTTATTTGTCAGTGTTCCCTATTTGTTACTTAACCATGATCCTCCAGATTTTTTGGAGTATTCTTTTCTAACCTTAACCCTGCCAAACCTTGATCCATTTTGACATTTGTTATGCACTATTTTTATATCTCTGTGAGAGATTTTTCCAACAGTCAGCTATTTTATGGCACACTTTTTTTGACTGATGACATCTCCTTTGCTATACCTCAATTTTTGGAATTTAGAGAAGAAATCAGTAGTTTTGCAATGTTAATTATTTAGATAT---TTAATTTCGCAGATTTTT--AAACTTTATTTTCATAATTTCTGCTTAATGTTTAAAATTGAAGAGCCTTTTCATGTATTAAATAATGAACACAAATTATATAA----------TTAAAATAATTGGAGATGTTGAAAATCATTTTCCCTTCTTAAACAGAAATAAATATTTGGAATGAAGGGGAATGTACTAGAACACCCTTT-TTGCCACGGGTAAAAATAACAGAAATGTATGGTTTGTTTTAC-CTTCATTTCTGTACAAGTAAAGCTTATTAGTCTAATGTTTTGTTCCTTTCCCACCTCACCCCTACCTCTTTTGTTTTGTTTTGTTTTTGCCCTTTATGTACTACATTCTTATTTTCTAACTTTTAAACACTGTATTGGAG------------GTTTTTTTTTAATTTACAGATCATATTTATTTTACTATTTTTGTAGAAAATTATTAATT---TTGATTGTATTTTTGTATTTTAAAAGCTTCTTCACTTGTGTTCCCTAAATATTCATATTGCTGCCCAAAAGTATGACTGTGGAGGAAAAAAAAA----TACTTTAAAAATCCACACTTTTTGTTAAGAAGGAAACATTTAGCATTTATATATTTGTGTATGGAAAACACTTGATATTTTATCCCTGTTGCATCTGGCTGCACAGAGCCTCTCCTCAAAGATGCTACAAAACTTGAATATAACACATTTTGGAAGGCTGACTAACCTCGATTCTGTGTTGTGATGTGCAATACTGTTTCTAATGTTTGTATAAAAAAA-AACAGTGTAAACCTTTTTAATGCAAATTTATTTTTTTCATTGCATATTTTGCAGATTTTATCCACAGTGTCATTTTTTACTGTCAGAAAAGATACCCCTTTTGTCATTGCAACTATTTTTTAAATCCAGAAATCTTTGTACTGATGTAAATGATTGTAGTTATTTTGGATAGTGTTTTGCTAACAAAAGGAGAGACTTTTTTCATGCATATTTCTATTTTGTTTTTTTGGGTTTTATTTTATTTTAATAGTAGTAAAATACTTGGAATAATTTTTCATATTCTTGTCATTAATATTATTTTGTATTTTTATGTGGAAATATATAATTTTATGACACTAATTGCTAAAGTTTATTTTATGTTGAATTATTTTTGGAGCTGAAATCTTTGTAATATTAAAGCAACTAGTTTCTAATTCCCAGTTTCTGTATAGAATCGCACAAGTGGTTTATGGAGTGTTTGGATTGTAATTATAAATGGTTCTTTGATATGCAAATTAATATTTTCAGTTGATTTTATTTTATATTCCTAATGGGGTGTTAAAGCCGTTTTTTATTTTTTTCTAAATAAAAAGAGAACCCATGCTTTTATGGACACTAGGTAAACACCTTCAGCTTA--AATTTTTCGTTAAATATTTTAGTTTATTTTATTGTTATCTTCCAGGTGTCTAAATCTCCAGTCTGTCTGTTGTACTGGTAATTTAACTCTGTAATGGAATAGTTTGCTGCCAACTATTTATATTAAGTAATTTTTAAATATTTGTAATATTGTTGACTGACTAATAAACTATTAAGTTATTGGCATAGTTGT---GGAATCTTAT-TCTTCGGTTCAAATCAAGTAAAATATTCAAAAACACCAGTA chr4 - 94230402 14453243 14453242 14457270 79773133 79773132 79777160 4028 AGGTGGAGGTAAAGCCATATGTGTTGGATGACCAGATGTGTGACGAATGCCAGGGCGCACGATGTGGTGGAAAGTTTGCTCCTTTCTTCTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCCCGTGCAGGACGTGAATTCCATAAGCCATTGGTAAAGGAGGGGGCTGACCGCCCACGTCAGATCCACTTCCGCTGGAATTAAACATGGTGAACCAGCATCTAC---ATAAGGAAAGAA-GGGTGCATGTGGCTTACTGTGTTTGAAGATACTGACATGCAGAAGAAATAAGTGCATTCTTCTGCTTTTCACCCCAGCTATCAATACATGCATCTTTATCAGCAGCCAAAACACTACAAGCCTCTTGTTTTTCACCAAAACCCTACATCTCAGGCTTACTAATTTTTGTGATATTTTCATGTTAAAATAAAATGTTTTTTTGTATTTTCTCCAAGTTATTTTTATATGTAAAGTTAAAACTAGATATGAGAATGTTTTTGCGTAGGGGCA-CACAGTCTGCTGCTATATTTAGTGGGTGAAGCGTGCACTTATTTCTAAACATGGGTTTTTAACTTCAAGATCTGCCCCAGTAATTTACCAAAGGTAGCAAAATA---GTGAAGATGGAATATGTCTGCTACAAAAAGCTTATTTTTATTGTTGTTGCTATTTTCAGTGTATACATAAACTAAAAATTAGGGTTGATTTTTT-GCTCTCCATTTTGACTTGCAAGAAATAATACCTCAAGATAATCTGATTTATTAGCTATTTTTAAACATTTTTAATCACAAGCTGTATTAGCTTTGCTGCTATATAGGTGTTATGTGTAA-TGCCACCTATTAATACGGGATTGAAA-CGTTTAAGACACACTGCATTACAGATTAAATGCAGGCAGCACAATATGGCTTAAACTGCCATAGTTTTAGAATGTGAAAAAATTGCATGTTTACTTACCTGTATAAACCATATGCATGCACTAGAACTATTAATTAACAAGAGGTGAGTTATTGCAGATGTTCAAAAAAGGCTCTCTTGAAACTAGGTAGCATGAGCAAATTTACAAAATTTGTTACAAAAAACAAACTTGCATGCATTATTGTGACTGAAG---TAAAAAGATGTCCTACATGTGTACAATATGCAAATTAGTTTTAGACTAGA-AGTGCAGCCATTTTGTGACCTGGTCAGTAGTGGAATTCAATTTTATGCAGACTGGATGTAATATT-GTAATCCCTGTGCAATTTTGTGACGTGTGCTTCTAATTAATGTGGCGTGTCGTAGCGTAGATTCGAGTTTGAGTACGAAG-----CTAGCATTT---AACGAGTTCTTTTCAACCCCCTTGATCGTTCATGGTTGAGATTTCCTCTACAAACCAAAGATGGCCAGCACACTGCTAACCAGTCACCAAATGTGGAACCCACGGCAAATACGTACAAAAATGACT-----------AAGAATGCCTGATGCTTTAGAAATCAAATCTAAGTAAAGTCAAAATGGAGAAGGTGTAATATACAGACGGCTAGTTGCAGAACGAACTAAATTCTACCTTTA--AGACAACAGTGAAATTTGGCTTAAAATCTCGCTTACATGTTTGACCTGTGTGCGTTGTGGTCTTCTGTC-AAACTGGGGTCACTGTTGCATGAGAAGTAGCTGCTTGACAGTCAAGGACAGTGCTTTC----ACTTTAATGAAGGAGTTCTAGTGATGACATTGCTTGCAGATGTC-------------GAAAAACGCCGTTAGGACAGAGGCAATATTTAA----------------CTGAGCACCAAGAGAAAACCGT-AGTGGCGTTTGCGTCTATCTC-AGAGCATCCA-AATGCAACTAGCCCCGCCTTGTTAATGGGACACAGCTATTCTGCAGTCTGAGCGA-GCACTCAG---TGGCAAATGTC-----AAAGTGCAGAACTAAGAGCCT-GATGCTA--GAGTTGAAATTACGAGGGCGTTGCTCT-TCGCAGTCCCTCGGGACAATCCTTCACGTAAGCAAAGTGTTGATCTTC-TCTTGGTTGTCTATGGTGTGCTTTTTTGTACTGTACAACC-TGTGGTTCATGTCTAACTCTGCTGTTTTATTGTGGTTGTGGTTCAAGTTTTTAATGTTTAAAGTTGATGCTGTTTTAAGAAGAGCTTTTTACTAATTTATTTGTCGATGTTCCCTATTTGTTACCTAACCATAATCCTCCAGATTTTTTGGAGTATTCTTTTCTAACCTTAACCCTGCCAAACCTTGATCCATTTTGACATTTGTTATGCACTATTTTTATATCTCTGTGAGAGATTTTTCCAACAGTCAGCTATTTTAAGGCACACTTTTTTTGACTGATGACATCTCCTTTGCTATACCTCAATTTTTGGAATTTAGAAAAGAAATCGGTAGTTTTGCAATGTTAATTATTTAGATATAATTTAATTCCGCAGATTTTTTTAAACTTTATTTTCATATTTTCTGCTTAACGTTGAAAATTGAAGAGCCTTTAAATATATTAAATAACGAACACTAATACGAAAAGGGGAAAAATTGGAAGTAATTGGAGATGTTGAAAAGGGCTTTCCCTGTTTGAATGGCACGCCGTGAGTAGGTCGCAGGGGG-CAAACGGGGATGCCCTTTCTTGGCATGGGTAAAAGTAACTGCAATGCCTGATTTCCCTGTCACTTCATTTCTGGAGCAGTTCTGCTGACGGTTATCGTGC------CCTGCACCACCTC-Ctttttgttgttttcttttgttttcttttt-ttttttatcgactgagttcttgttttctacctgttgaacactgtatttgagttgttttgttttgttttttttt--tttACAGATCATATTTATTTTGCTATTTTTGTAGAAGATTGCGAGTTAGTTTGATTGTATTTTTGTATTTTTGAAGCTTCTTCACTTTCGTTCCCCAGATGTGCACATTGCTGCCCATGAGTATGACTGTGGAGGAAAAAAAAAAAACTACTTTAAAAATCCACACTTTTTGTTAAGAAGGAAACATTTAGCATTTATATATTTGTGTATGGAAGACACTTGATATTTTATCCCTGTTGCATCTGGCTGCACAAAGCCTCTCCTCAAAGATGCTACAAAACTTGAATATAACACATTTTGGAAGGCTGACTAACCTCGATTCTGTGTTGTGATGTGCAATACTGTTTCTAATGTTTGTATAAAAAAATAACAGTGTAAACCTTTTTAATGCAAATTTATTTTTTTCATTGCATATTTTGCAGATTTTATCCACAGTGTCATTTTTTACTGTCAGAAAAGATACCCCTTTTGTCATTGCAACTATTTTTTAAATCCAGAAATCTTTGTACTGATGTAAATGATTGTAGTTATTTTGGATAGTGTTTTGCTAACAAAAGGAGAGACTTTTTTCATGCATATTTCTATTTTGTTTTTTTGGTTTTTATTTTATTTTAATAGTAGTAAAATACTTGGAATAATTTTTCATATTCTTGTCATTAATATTATTTTGTATTTTTATGTGGAAATATATAATTTTATGACGCTAATTGCTAAAGTTTATTTTATGTTGAATTATTTTTGGAGCTGAAATCTTTGTAATATTAAAGCAACTAGTTTCTAATTCCGAGTTTCTGTATAGAATCGCACAAGTGGTTTATGGAGTGTTTGGATTGTAATTATAAATGGTTCTTTGATATGCAAATTAATATTTTCCGTTGATTTTATTTTGTATTCCTAATGGGGTGTTAAAGCAGTTTTTTATTTTTTTCTAAATAAAAAGAGAACCCATGCTTTTATGGACACTAGGTAATCGCCTTCAGCTTAAGAACTTTCGGTTCGATATTATAGTTTGTTTTACTGTTATCTTCCAGGTGTCTAAATCTCCAGTCTGTCTGTTGTACTGGTAATTTAACTCTGTAATGGAATAGTTTGCTGCCAACtatttatattaagtaatttttaaatatttgtaatattGTTGACTGACTAATAAACTATTAAGTTATTGGCACATTTCTTTCGTAATTTTGTGTCTT--GTGCAACTCTTTAACATCACTCAAATGGACCAGCA .......................:.:.................:.................x...........:........:..:..:...........................................................:.....x........:.......................:..x.....:.............................:...:x..:.::...::..x...::---.:..........-......................:................................................................................................................................................................x.......................................................:..................-...........-..................--......x.............................................................................---...........................x-.................---.............................................-.......................................................................................................................-....................:.....-....x:..............:.....x.......................:...............................x......................x....................:......:....--........x.......:.............-..........x.............:......-.:..........xx.....:.........................xx.:---......:x:...:................................:....-..................:...................:..........................-...........................:.x........x.....xx...x::...::.....xx:..xx......x:.::-----.x..x...:---.:x:....xx...:.:....:.....x..:.......:...:x....:..:...........................................:::.....:::x...:x.:..:xx...x:x..-----------........--:.x:......---.x..x:.........................x.x..........:...........x..--..:......:........--......::.......:......:..--..:.....::.....:....:.:x:::...x...........-......................::.x:.x.:.-...:.:...::..:.:x.:x:...:----.:...x........:..:.:..:.....x..........:.x.:-------------::...::.x.:.--...x.x.x...:..x....----------------....:...:.xx....x.:.:.-....:::...---.:.x...:-.......::x-...............xx:x.x......x:.x.--.:..:......:...:...:.-....:..:---...:......:-----...:.............x::.-..:x...--...xx:.......:....:.....::.-.x...:x....:..............:..:.................x-.x..........:......................x..x:-............................................................................x............................::.................:.......:..............................................................................................................................x............................................................:........:..............................---......:...........--................x...........:...x.................xx..:..........:......x...xxx.x..----------.x:..:...................xx::.......x:..:..::.x.xxxx:.:xx.:.:x:.x.....:-::x..x:.:.::......-...x..:........:....x.x....:x..:...x::.xx.-...........x.xx...xxx...x.:x:x.x.x:..:------...x:x.......-.:::.xx:.x....x.........x.....-:::.....xx...:x:.....:.......x..x..:...........x...------------..........--.....................:..............:...::x.:..---.....................x:..............x:......:.:..:.x..:...........x:.........................----..................................................................:......................................:.................................................................................................................-......................................................................................................................................................................................................................................x.......................................................................................................:..................................................................................x.......................................................................................x..............:.......................x.........................................................x.:...........--..:...:x...x:.....x......:.....:.........................................................................................................................................................:.x..x.---.x...:..:.-....--..x...x..xxxx.x.x:.:.....x:x.....:. 251M3D12M1D258M1I11M1D18M2I84M3D28M1I17M3I45M1D119M1D26M1D138M2I30M1I31M1I49M3D50M1D65M1D80M5D9M3D126M11D8M2I10M3I59M2I18M2D25M2I42M1D32M1I25M4D44M13D12M2I19M16D22M1D10M3I8M1D10M1D32M2I21M1D8M3D11M5D21M1D7M2D27M1D48M1D40M1D360M3I18M2I83M10I71M1D18M1I42M1I38M6D13M1D30M1D51M12I10M2D47M3I94M4I219M1I616M2I192M3I10M1I4M2D35M 3558/3957 89.9% 4028/94230402 0.0% 173/3957 4.4% 612908 NA +3180 chr4 + 190214555 15081737 15081736 15081798 62 TGCCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGT chr4 - 94230402 76182409 76182408 76182470 18047933 18047932 18047994 62 TGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGT ...:......x.:x.:..:xx........x............:...x.:..xx...:..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -61100672 -33129730 +3649 chr4 + 190214555 15115658 15115657 15115756 99 TCAACTCTCATTTCTT--TCCTTCCTTCCTTCCTTCTCCTCCTCCTCCCTTTCTTTCTTTCTCTTTTCTTTCCCTCCCTCCTTCCTTCCTTCTTTCCTCCC chr4 - 94230402 79653014 79653013 79653114 14577289 14577288 14577389 101 TCATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTTTATCTCACATCCC ...x...x.x.....:--:.....::....x...x...:.:.xx:....:x.:.:...:.::..:..:.x......:.x:.......::x...:x.x.... 16M2I83M 66/99 66.7% 101/94230402 0.0% 2/99 2.0% -64537356 -29693046 +3111 chr4 + 190214555 15126655 15126654 15126713 59 CAGAGAGACTCCACCTCAAAAAAAAAAAAAAAGAAAGAGAGAGAGAGAGAGAAAAAGAA chr4 - 94230402 56794878 56794877 56794936 37435467 37435466 37435525 59 CACAAAAGTTTCACATTAAAAAAAAAAAAAAAGAGAGAGTGAGAGAAAGTGAACACAAA ..x.:.:::.:...x.:.................:....x......:..x...x.x:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -41668223 -52562179 +3167 chr4 + 190214555 15126665 15126664 15126741 77 CCACCTCAAAAAAAAAAAAAAAGAAAGAGAGAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAGAAAAAAGAAAGGAAA chr4 - 94230402 25066980 25066979 25067056 69163347 69163346 69163423 77 CTGCCAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .::..xx.:.x.:.x.:..:..:x..x......x.:...x::..::.:..:..........:.:.x......:.... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -9940315 -84290087 +3044 chr4 + 190214555 15133075 15133074 15133194 120 ATGATGAAGGAAACATCACCGTTTAGTACAATACTTCCTATTATCATTTTCTTTTTTTCTCTTTTCTTTTTTTTTCTTTCTTTTTTTTTTTTTTTCTTTTTGAGACAGGG-----TCTCACTCTG chr4 - 94230402 70081403 70081402 70081516 24148887 24148886 24149000 114 ATGATGGAGGATA--------TTTAA---AATACTTGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTG ......:....x.--------....:---.......x::x..x.:x.......::x:..x.x:xx:xx.........:...:.:...........:.::..:.:.:.:..-----.x.:...... 13M8D5M3D81M5I10M 75/109 68.8% 114/94230402 0.0% 16/109 14.7% -54948328 -39282074 +3139 chr4 + 190214555 15137577 15137576 15137616 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -3844738 -90385664 +3102 chr4 + 190214555 15137579 15137578 15137614 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -66491485 -27738917 +3353 chr4 + 190214555 15137579 15137578 15137618 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -3844736 -90385666 +3316 chr4 + 190214555 15137581 15137580 15137616 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -66491483 -27738919 +3567 chr4 + 190214555 15137581 15137580 15137620 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -3844734 -90385668 +3102 chr4 + 190214555 15137583 15137582 15137618 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -66491481 -27738921 +3353 chr4 + 190214555 15137583 15137582 15137622 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -3844732 -90385670 +3139 chr4 + 190214555 15137585 15137584 15137624 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -3844730 -90385672 +5395 chr4 + 190214555 15144247 15144246 15144486 240 TTTCTTTTAAACCATTGTTATATGA-CGGTAGAAGTGTTCCTCACTTCGAGATGCTTAGTGATGACTAGTTTTATTTTTATACCCACCATTTCCTCTTGAAGAAATTAAACAAATAAACAGATGCCACCCTCTCTCCCTCTTCTCTTTTTTGGCTTAGGTCCTCCGACAA-TGCAGTGCTTTCTGCACCATCTGCTGGCTCTGCAAAGGTAATTAACAAAGGCACACTATTCCCAGATGAGG chr4 - 94230402 14469870 14469869 14470082 79760321 79760320 79760533 213 TTTATCTTAAAACATT----TATAATCTGTTGGGGAGACGTCCATATCTAAATGTCCAATT-TGGTTTGTTTGTTTTTTAAATCTGTCGTTCTGTTGCCAAGAAATTAAACAAA----CAGATGCCACTCT----------------TTTTG----AGGGGCTCCATTAAATACAATGTCTTACGCACCATCTGCTGGATCTGCAGCAGCAATTAACAGACACGCGCTATTCCCCGGGCAGG ...x.:.....x....----...:.-.x..x.::.x.x:x::..:x..x.:...:::.:.x-..::.x....xx......x.:.:::.:..::x.:x:x...............----..........:..----------------.....----...xx....:x:..-.:..:..::..x:..............x......:x:.:........:.x:.:.:........x.:xx... 16M4D5M1I35M1D52M4D13M16D5M4D14M1I71M 144/211 68.2% 213/94230402 0.0% 31/211 14.7% 674377 NA +15874 chr4 + 190214555 15147767 15147766 15148649 883 TTATCTTTTATTTTTCCAAGTTTTGGATCCCTTCCCTTCTTCCATCTGGCACAAAAGCACTTGGAGGCCAGTATCTGG----ACCTGGCCTTCAAAAGCCAGTGAGTGTCAACAGGAGAACGGATTCCAGACGCACGGGACAATGG-CCTTTTCAAGGCACAGAA-TGCTGCTCAGTATTGTACGGTTT-GCATGTGATGCAGCTTCTTGAATGCACACAAACACTCCCATTTTCACCAGCTCCATGATGGTGACTTATTTACTGCTGAAGATCCCAGGGCCGATTCAAACTGCAAACATCTATCCCCACCCCAAAAGGGAAGAAAAAAAA--AAAAACCTG----------------------ACAACAACAAAAAGCCACAT--------ATGAAAAAGGAAAAGCCAACCAGTGTGCGACTGTGGGACTGGAACTCT-----GAAGTGGGCACCAGGTGCATTAATTACACTTGATTGCGTGTTGGTTTATGACTGCAGTCACTTGTGTGCTATGTTCTTGCCCCGCAGCATCTGTG-CCGAAGGATGTCCTTGATATTTCACTAAGCAAGATGAATATTGGCCAGATGGTGACTTCACAAGGACATAATTCACATAGCATTTTCCTGCCCCGACACAGATTTCTGTGAAGGAATCTTGAATGCCACGCTGAACAAAACAGAACAAGAA-AACTCAATGCCCCGAGAAGGCTCAGTCGTCGTAAGTTGAAGATTAATGGTCTCCACAGTGATGCCGACAGCAGCCCAAATGGCAGCCGGATCCCAGGCTCATGCTGCAGATCTTGCCAACCCATCTCTCTGTCGCTTGCAGAGTGAGCTGACATCATCTGAGGCATCTCCAATTCACTTGAGGGGGGAAGGGCACTCCCTGGGCCCCAAAAACACACACCACAGGAAACTGGGTCA chr4 - 94230402 14472553 14472552 14473366 79757037 79757036 79757850 814 TCACTTTTTATTTTTAC----CTCGTATCTTTTCACTTTTTCCAGTTGATTCTAAAGCTCTTGGAGCCTACTAGCAAGGATTACATGA---TACAAAACAAACCTTTGCCAGTGGTAGAACCAGATCAGCAGAAACAAGACAATAGTCCTTTTCATGCCACAAAAATGCAACTAAGCAGCATATAGTTTCATGTGTGCTTCCACTTTTT----------------TCCCCTCCTCATTAA----ATTATGAAATACTATTTACT---------------------------CGCAAACATTATAGTTCACTTTTTAAGGGAATTAATATGATTAAAGGCTTGTTTGGATGTGATGATTGAAGTTCCAACTATTAAAATGCACATCGGTGTGCAGGGAAAATAAAAAGGCA--------------------CGGAAATTCTTTTCAAACCCAAGCACCAGGTGCATTAATTACATTTCATTGCATGTTGGTTTATTACTGCGGTCACTTGTGCCTTATGATCTG---CATTAACACCTGCGTTCTATGGATAT-CTTGGTATTTCACTAAACAAGATGAATATTGGCCAGATGGTGACTCCAGTAGGAAGCATTTCACATAG-ATTTCCCTGCTCTG-CACAGTTGCCTGTAAAGGAATCCTGAATGTCACACTAAACCAAACCAAACAAAAACCGCACAACGC---------------------TAAATTTGAGATTAACTGCCTTCACAGTAAATTTG-CAAAGGATCAGAGGACAGTGGGATCCAGGCCCTGTGACATAGACCTTGCTAATAAATCTC----CTGCGTGTAGTGCAA--CGCCATCATTTGA---ACAAACATTTCCCTCCGTGGGG---TGACCCTGCCTTGTACAGCAATACA-ATTCTGCAGAAAAGTGGGTCA .:.::..........x.----:.:.x...::...x...:.....x:..::x.x.....x.......x.:.x..x.x:.----..x..:---.xx...:.x.::xxx..:..:::.x.....x::x..x:x.x:x..::......:.-........x.x....:..-...x:..x..:.x::..::....-:::....x.x.x:...:..----------------....x.::...::.:----..x...:x:xx:........---------------------------:........:xxxx::...:::xx.......xx..x.x:.--...::.:..----------------------x....x.:x....xx.....--------.x.:....x:.....x..--------------------.x.:..:...-----:.xx:::.....................:..x.....:...........x.....:..........:x:....x...x---.xx:.:..:...:.-:.x.x....:.-....:...........:............................:..xx....x::.x.........-....:.....:.:.-.....x.x:....:........:......:...:..:...x....x:.....:..-x:.x...:..---------------------...:..x:.......:x.:..:......:.xx::.-..:x:.x:..:.x.:...:x......x:.x.:::..x:::...:.....:..:xx.....----::..x..:..x.::.--:.x......:...---.:xxx..x...x..:x:x....---x.:.x..x...x.xx.xxx..x...-.:x.::...:...x....... 17M4D57M4I6M3D55M1I18M1I23M1I19M16D15M4D20M27D40M2I9M22I20M8I18M20D10M5I78M3D14M1I11M1D68M1D14M1D55M1I10M21D35M1D60M4D15M2D13M3D22M3D25M1D21M 519/768 67.6% 814/94230402 0.0% 161/768 21.0% 675214 NA +3159 chr4 + 190214555 15162563 15162562 15162622 60 GACAGAAAGAGAGAAAGAAGGAAAAGATGACAGAAGGAAGGAGAAGGAAGGAAGGAAGGA chr4 - 94230402 47169717 47169716 47169776 47060627 47060626 47060686 60 GACAGCAGCTGAAAAATGAGGAAAAGAGGAGAGGAGGAGGGAGAGGGAAGAAGGAAGGGA .....x.:xx..:...x:.........x..x..:....:.....:.....:.:.:.:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -32007154 -62223248 +3559 chr4 + 190214555 15162636 15162635 15162747 112 AGGGAAGGAAAGGAAAAGAAAGGAAAGGAAAGGGAGAAAGAAAGAAGAAAGAAAGGAAAGAAGGAAAGAAAGAGAGAGAAAGAA---AGAAAGAGAGAAGAAAGAGAAAGAAAGA chr4 - 94230402 7589952 7589951 7590066 86640337 86640336 86640451 115 AGAAGGGGCCAGGAAAAAGCAGGAAGGGATTAGTTGAAAGGAAGAACAAAGGAAGGGGCAGAGATATGGAGGAGAGGGAGATAATTCGGCTGGTGAGAAGGAAGGAAAATGAAGA ..::::..xx.......::x.....:...xx:.xx.....:.....x....:....::x::..:x.x.:.:.....:..:.x..---:.xx:.x......:...::...x:.... 84M3I28M 71/112 63.4% 115/94230402 0.0% 3/112 2.7% 7572684 NA +3219 chr4 + 190214555 15167561 15167560 15167630 70 ATATATATTATTTTATATATATACATATATATATATAT--ATATATATATATATAAATATATATATATATGC chr4 - 94230402 52487151 52487150 52487222 41743181 41743180 41743252 72 ATTTGTATCATTTTTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGC ..x.:...:.....x..x..::...........x...:--..:...:.:.........xx.x...:..:... 38M2I32M 53/70 75.7% 72/94230402 0.0% 2/70 2.9% -37319590 -56910812 +3672 chr4 + 190214555 15205187 15205186 15205247 61 CTCCTGAGTTCAAGCGATTCTCTTGTCTCAGCCTCCTAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...:.......:.x...x.xx.x........:::..........:......x...... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -2991952 -91238450 +3041 chr4 + 190214555 15258318 15258317 15258385 68 CAAGAACCCTATGAAATAGGTACTACAATTATTTCCATTTTATGGATGGAAAAGCTGAGGCATGGAAA chr4 - 94230402 59430553 59430552 59430620 34799783 34799782 34799850 68 CAAGTGCTTTAAGGAAATACTACTATCATTATCTTCATTTTGCAGCTGGAAAAGCAGAAGCATGAAAA ....x:.::..x.:..xx:x.....:x.....:.:......:::.x.........x..:.....:... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -44172235 -50058167 +3144 chr4 + 190214555 15259447 15259446 15259517 71 GTGAACTATTGCCTATT----TTTAGGTATTTGGGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTT chr4 - 94230402 75498504 75498503 75498578 18731825 18731824 18731899 75 GTGATCCCTTATATATTCCCCTTCAGACATCAGAATTTTTTTGTGTGTTATTTTGTTATTGCTTGTTTGTTTTTT ....x.:x..::x....----..:..::..:x.::.........x....xx......x...:............. 17M4I54M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% -60239057 -33991345 +3121 chr4 + 190214555 15259475 15259474 15259519 45 GGGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTTGA chr4 - 94230402 14312788 14312787 14312832 79917571 79917570 79917615 45 GGGTTTTTCTGTGTGTGTGTGTGTTGTTGTTTGTTTGTTTTTTAA ........:...x...x...x....x.................:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 946687 NA +3296 chr4 + 190214555 15291970 15291969 15292066 97 GAAAGAAAAAGAAGAAAAAAAAAGAAGCGAGGGAGGGAGGGAGGAGGCAAGGGGAGGGGAGGGGAGGGAGGGAGGGAAGAAAGGGAAG--GAAGAAGAG chr4 - 94230402 76099074 76099073 76099170 18131233 18131232 18131329 97 GATAGAGAAAGAGAAGAGGTGAGG--GCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAG ..x...:.....::.:.::x:.:.--..x:.........x..:..:.x......::.xxx.:.....x...:..:......x.::..:--..:x..... 24M2D62M2I9M 64/95 67.4% 97/94230402 0.0% 4/95 4.2% -60807104 -33423298 +3093 chr4 + 190214555 15321869 15321868 15321941 73 TGTCCCCCTTTTGCAGATGAGGAAACCGGGGCACAGTGATATTAAATAACTTGCCCAAGGTCACACAACTAGT chr4 - 94230402 73089453 73089452 73089524 21140879 21140878 21140950 72 TGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAACAC-TCAGAAGCCACCCAGCAAGT ......:x.....:....x......x:.:..........x:.x.......x:-:.x:.:.:...x..:.x... 52M1D20M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% -57767584 -36462818 +10053 chr4 + 190214555 15339832 15339831 15340736 905 CACTCCTACTTGTTCTTAACTAGTGTATATATTAAGCTCTTTGAAATGTGAGTATTATGGGAAGGATCGCAGTTGCTTTAAATTATAGAAGTTGGCAAGTCCCTGGGAGAAGGAGTGGGAGGTTGTTTAAACTGAGAAAGACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAACGCATTCTCATGCTCAGACGAGCACTTTATTTTTCATCAAGTTATTTTTTGCATTGTTTTGGAGTAGCTTCGAATAATAAACACATATTT-CTGCTTTAAATTTTTAATAGTTAACTACATTCATGGGACAACCAAAGCAAGAAAGCCTCATGTTTTGGGGGAAAGTTTGATATCAGC------AATGTCCAGACAAGGTAAGCTACCATTTTCACTGCAGTTTTTCTCTTTTTCCCTCCTATTCGGCCTTCA--TCAAAATATTTCCTGGGAGAACTTAAGAAAGCTCCTTGTAAAGAAATGGGGGAACTTGTAAAAATATGTCAACAAATGATAAATCAGAGGTTAGAAAACCTCCGCAGGAGAGCGTTCTCCTACTTTCTATTCTGCTTGATTCATGAACCTCTGTAAATATCTTTCACTATATAAAAAATCCCATTTG-----------------TTTCAGAAAATGTAAG-CGGAGTCTTCAAAATC-----TCCAATCTGATG--AACTTAGCATTTGTCAGTGT--------------------GGTGACAGGCTAACTTA------TTCCCAAGGTCAGCTTATCTATGTTTTCTTATCCCCTTATATGCAACTCAACTTCCGGAGCTGTGATTCTTCTATTAACTTGGAAATGTTTCCCAAGGAAGATTTTAATATCTTTCCAAAAATCCTCCT-AAGTGCAGTTACTATGGCTTCTTATTAACTTGTTTTGCAGAATATATTTTTAAAAGTTAAATAAATCATTTGTCTTT chr4 - 94230402 14493960 14493959 14494803 79735600 79735599 79736443 844 CACTCTTGCTTGTTGCT--CCGCAGTATACATTGAGCTCCCTCCAGCAGGAGTTTTATAGCGAGCAG-ACAGTTGCTTTAAATTAGAAAAGTTGGCAAGTGTCCGAGGAAAGGAGTGGGAGCTTATTT-AGCTGAGACAGGCAGTTCCAAAGCTCAATACAAGAGCAT------CAAGCTTCAAATAAGTTTTCGTG-------AAGTACATTATCTGTCATCGAGGCG---TTCAGATTGGCTTTAACGGATTTGGAAATACCAACAATTACCTGTTGGCTTCAATTT----------ACAGCTCCTACGGCACGACCCGAA-AGAAGGGTGTTGCTTTTCCTGGAAAACATTGGTGTCATCTACTCGAATGT-----AAAGGTAAGTTGCAA---------CAG-------ATTCTGCTTTCCTATTCTGACTTCCTTTCAAAGAA--------GGGAATGTAA-------CTTTCAGAAGAAATGCAGGTTTTTGCTGGGATAC-----------ACGATTCC---ATTAAAAATCCATTGCAGTA----GTCCTCCTGT--------------------TAAATTTCTTTATGTATCCTGTAAGAAAGAAAGACTCTGACATGTATGCACATAACCCTCCTGTCAGAAATTACAAGACAGATTTTTAAAAATCAGGGACACAATTTTCTGGTAAAAAATTCCTTGTAAATGTCTACCTTTCACAAAGCTTAGGGTGATATAACTGCTTAAGATCTTTTGCAATAT----TTATTTCTATTTAACTTTAATCTTACATTCCA-TCAACT--CGAAATAGAGAT-----TATAGGCTT-----TTTCCCTCGTGAATGGTTCCAGCATCATTCCAAGTATTCACTTGAACCTTTGTTGCTATGGTTTCATAGAAATTTGTTTTGCAAAAAAAATCTGTAAATACCAAATAAATCATTTTGCTTT .....:.:......x:.--.::xx.....:...:.....::.xx.:::x....x....:.x:..x.x-:................x.:............x:.:.:.::............x..:...-.:......x..:.....x....:..:x:.....x.....------...........::x:..:..:..-------:..:..x....:.x.....:..x::---..::x....x:..x:.xx:::..x...xx.:x....xx..::.-:..x:..x.....----------..x:.x:::.:..x..:...x:.:-.::.::.:x.:::x...:xx..:...xx...:.:...x.------.....-----x........:.:.x.---------...-------x..:.x.::........x.x....x--.....:x.--------.:...:x...-------.:..xx:........x:..xx:...:x:::...:-----------.::.x..x---:...:...x..x::....x.----..:.....::--------------------.:..::...x..x:....:.x:.xx.x.x...:.x..:x.:x..-----------------.x.......x.::...-.:..x.:..x......-----:x....:.xx..--..xxx.x:x:....x.:...--------------------.....:.x:x:x:....------..:x...x:.----....:.x.:...xx:.x.xx:....:..x.x.-......--..:.::x.x...-----...x::...-----.x.::.:.:x.:.x.:..::.::...x......:x..:.x.:.-..x:x:x...:......:...x..xx..:..........:..x.x..:.x....x:::.............xx.... 17M2D48M1D60M1D39M6D23M7D25M3D43M1I13M10D24M1D39M6I5M5D15M9D3M7D25M2I8M8D10M7D34M11D8M3D20M4D10M20D44M17I16M1I16M5I12M2I20M20I17M6I10M4D32M1D6M2D12M5D9M5D43M1I77M 508/783 64.9% 844/94230402 0.0% 183/783 23.4% 845872 NA +5107 chr4 + 190214555 15350162 15350161 15350361 200 GGAGGGAGCGAAGGAGGGAGGCAGGAAGGAAGGAAGGGAAGAAGGAAGGAAGGGAGGGAAGGAAGGAGGAAAGAAGGGAGGGAGGGAGGGAAGGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGGAAGAAGGAAGGAAAGGAGGGAAGGGAGGGAAGGAAGGAGGAAAGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAA chr4 - 94230402 57300994 57300993 57301185 36929218 36929217 36929409 192 GGAGGCGGGGGAAAGGTGGGACAAGTGGGAATGTAGGGAAAAAGGAAGAAATGTTTGGAATTTACGAGAAAA--------CGTGGGAACGTAGGAGAAAAGGTAGGGAAAATGTAAGAATGTAGGGGATAATGTGGGAAAAGGTGGGAAAGCAGGGGAAATGGTGGAAAAAAATTGGGAATGTTGGGGAAAAGGGTGGAA .....x:.x.:.:::.x.:.:..:.x:....x.x......:.......:..x.xxx....xxx.x...:...--------x.x....:x.x......:.:..x:..:::..x.x.:...x.x....:.x..x.x:.....:.:x..:.::.x:..::::.x..x.....:...xx:..:.x.xx...::::....x.... 72M8D120M 117/192 60.9% 192/94230402 0.0% 8/192 4.2% -41950832 -52279570 +3135 chr4 + 190214555 15350230 15350229 15350291 62 GAAAGAAGGGAGGGAGGGAGGGAAGGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGGAAGA chr4 - 94230402 51453165 51453164 51453226 42777177 42777176 42777238 62 GAGAGGAGGGAGGAAGGGAGGGGAGGAGAGAAAATGATGGAAAACATGGAGAGTAGGTAAGA ..:..:.......:........:........:::x.:x:.:...x.x...::.x...x.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -36102935 -58127467 +4207 chr4 + 190214555 15350241 15350240 15350389 149 GGGAGGGAGGGAA---GGAGAGAGG---GAGGGAGGAAAGAA---GGAAGGAAGGGAAGAAGGAAGGAAAGGAGGGAAGGGAGGGAAGGAAGGAGGAAAGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAAAAAGAA-------TTCTGAATTTTTCTTCA chr4 - 94230402 1312662 1312661 1312826 92917577 92917576 92917741 165 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGACGTGTCTTTCAGGATTAGTCCTCA ..x..........---...x....:---..x....:..x...---:.x....:.:.....x.xxx:..:.:.....:....:...:......x::..:::...:.:x:..::.:....x..x.xx..x.x:..:..:.::.-------...x.:...xx..:... 13M3I9M3I14M3I96M7I17M 100/149 67.1% 165/94230402 0.0% 16/149 10.7% 14037579 NA +4931 chr4 + 190214555 15353269 15353268 15353399 131 TGGCCTTCAAGTTCATTCCAGGACAAGTTTTAGATTCTTTAAGATCACG-TTGGGTAAGACCATAACAGAGACTGTTTAGTTTGGACAGACAAATTGCCAACATACCCATAAAAGGGAGGATTGGCTGAGCA chr4 - 94230402 14500302 14500301 14500433 79729970 79729969 79730101 132 TGACCTCTGTGATTATTCTGGAACAAGGTCTGGATTCCTTGTGATTAAGACTAGATGATCCCATTGCAGAAACAGTTTTGCTCACATGGAAGAATTGCCAAGATACCCTTAAAAGGCAGGATCTGCCTAGCA ..:...:::x.x.:....::.:.....x.:.:.....:..:x...:.x.-:.:.:.:.xx....x:....:..x....x.:.::x.::..x:.........x......x.......x.....:x..:x.... 49M1I82M 87/131 66.4% 132/94230402 0.0% 1/131 0.8% 852967 NA +3947 chr4 + 190214555 15432471 15432470 15432555 85 CTGCAACTTCCACCTCCAGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGAATTACAGGTGCACGCCACCATGCA chr4 - 94230402 18197126 18197125 18197208 76033195 76033194 76033277 83 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTGTA ..:..:.::xx.x..:.x...........x...x.xx.x........:..:...........:....x.....--....::..:. 73M2D10M 62/83 74.7% 83/94230402 0.0% 2/83 2.4% -2764655 -91465747 +16835 chr4 + 190214555 15435716 15435715 15435990 275 TCTGTGTGTTTCTCTTCCAGAGCCAAAGATGTTTGTCTTGCTCTATGTTACAAGTTTTGCCATTTGTGCCAGTGGACAACCCCGGGGTAATCAGTTGAAAGGAGAGAACTACTCCCCCAGGTATATCTGCAGCATTCCTGGCTTGCCTGGACCTCCAGGGCCCCCTGGAGCAAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGGAAGAGATGGTAGAGACGGCAGGAAAGGAGAGAAAGGTGAAAAGGGAACTGCAGGTAATGAAT chr4 - 94230402 14539735 14539734 14540009 79690394 79690393 79690668 275 TCCATGTGCACTTTTTCCAGATTCAACGATGTTTGTGTTGCTGTACATTACAAGTTTTGCCATCTACACCAGTGAACAACCTCTTCAAAACCAGTTCAAAGGAGAGAACTACCACACCAGATACATCTGCAGTATCCCTGGGTTGCCAGGTCCCGTGGGCCCCCCTGGAGCTAACGGAGCCCCAGGGCCACATGGACGCATTGGTCTTCCAGGAAGAGATGGTAGAGATGGCAGGAAAGGAGAAAAAGGTGAAAAGGGGAGCGCAGGTATTGAAT ..::....:x::.:.......x:...x.........x.....x..::................:.:::......:......:.xxx:x..:.....x...............:x.x....:..:........:..:.....x.....x..x..:x::..x...........x..:..xx....x.....x.....x.....:..:.......................:..............:..............:.x:.......x..... 275M 218/275 79.3% 275/94230402 0.0% 0/275 0.0% 895981 NA +3393 chr4 + 190214555 15435852 15435851 15435928 77 CCTGGCTTGCCTGGACCTCCAGGGCCCCCTGGAGCAAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGG chr4 - 94230402 80192442 80192441 80192518 14037885 14037884 14037961 77 CCTGGCTTCCCTGGACCTCCAGGTCTTCCTGGAATAGATGGCACTCCTGGACGAGATGGACTGCCAGGTCTGCCTGG ........x..............x.::......::.:....:x.:.....:.xxx....x.xxx:x..:..x..x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -64756590 -29473812 +41204 chr4 + 190214555 15442133 15442132 15443093 961 GGAACTATTAATCAAACTATATACTCTTTCTGAAGGTTTGAGAGGTAAGACTGGACCGCTAGGTCTTGCCGGTGAGAAAGGGGACCAAGGAGAGACTGGGAAGAAAGGACCCATAGGACCAGAGGGAGAGAAAGGAGAAGTAGGTCCAATTGGTCCTCCTGGACCAAAGGGAGACAGAGGAGAACAAGGGGACCCGGGGCTGCCTGGAGTTTGCAGATGTGGAAGCATCGTGCTCAAATCCGCCTTTTCTGTTGGCATCACAACCAGCTACCCAGAAGAAAGACTACCTATTATATTTAACAAGGTCCTCTTCAACGAGGGAGAGCACTACAACCCTGCCACAGGGAAGTTCATCTGTGCTTTCCCAGGGATCTATTACTTTTCTTATGATATCACATTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCATGATGTGGCTTCGGGGTCCACAGTCATCTATCTGCAGCCAGAAGATGAAGTCTGGCTGGAGATTTTCTTCACAGACCAGAATGGCCTCTTCTCAGACCCAGGTTGGGCAGACAGCTTATTCTCCGGGTTTCTCTTATACGTTGACACAGATTACCTAGATTCCATATCAGAAGATGATGAATTGTGATCAGGACCA----AGATCCCTGTGGTA---------AACAC---------TCTGATTGAATCTGGGGTTCCAGAAGGTGGAACAAGCA-------GGAAT----------------GGGATCCAAA---GAGACTCCCACTCAGATTCTAAAGCATTTAAAGACAATTCTAGCAGAATTTATCA--AAACAAGATGAAACACAGAAAAGTTGAAACCACAACAAAATGAATTCTATTAAAGAATAGCCCCAGATATAAATTCTCTTGAAAGCAATGTTCATA--AATATTTAAGCAAATTAAAGACAATGT-TAACAAATTTTCTATTAAATGCCCTGAGTGATAAA chr4 - 94230402 14540673 14540672 14541657 79688746 79688745 79689730 985 GAAACTACTAACTAACTTAAA--ATGTTTTTGAAGGTTTAAGAGGAAAAACTGGGCCATTAGGACCAACCGGAGAGAAAGGAGACCAAGGTCAGTCTGGGAAAAAAGGACCAGGAGGACTGATTGGTGCCAAGGGTGAAGTAGGTCCAGCTGGACCACCTGGACCTAAGGGAGATAAAGGAGACCGAGGAGAGCCAGGTGCACCAGGGGTCTGTAAGTGTGGGAAGATAGTGCTGAAATCTGCCTTTTCTGTTGGCATCACCACCAGCTACCCTGAGGAAAGACTACCAATTGTATTCAATAAAGTCCTCTTCAATGAGGGTGAACATTACAACCCTTCCACAGGGAAGTTTATTTGTGCCATCCCAGGGATTTATTATTTTTCTTATGACATCACCTTGGCAAATAAGCACCTTGCGATTGGGCTGGTTCACAATGGGAAGTACCGCATAAAGACATTTGATGCAAACACAGGAAACCACGACGTAGCTTCTGGGTCCACTGTGATCTACCTTCAGCCAGAAGATGAAGTATGGCTTGAGATCTTCTACACTGACCAAAATGGTCTCTTTTCAGACCCAACATGGGCAGACAGCTTGTTTTCTGGATTTCTCTTATACGTTGATACAGATTACCTTGATGCTTTATCGGACGAAGATGAGCTCTGAAGCAGATAATGTCAGATCACAGCCAAACGACAATCCAGCACATGACTTTATCTGGCCGTGTGTGGGA---CACAAAGTGGAAAATGAATAACCTGGGAATTTATTTTTGCTTTGACAGGAACCAAATCTGAG-------TTCAGAT--GAAGATTTCTAGAATCAA----AGCTGGATTCTTTACCAAACAACAGGGATATCAAAA-----GGAACTATAACTAACAAAAGACT------GCATCGCTCCAGGACAGACTCCTCATGGAAGTTATGTTTACGATATTATTTAAACAAATTTAAGATACTGTACATTGGattttatataaaatatattaaGTTACAAA .:.....:...::..x:..x.--x.x...:.........:.....x..:.....:..::....x.:x:....x........:........xx..x.......:........x:x.....:::xx..x.xx..:..x............::...x..x........x........:.:......x.:...:..x..:..xx::..x..:..:..:.::.....:.:x..x.....x.....:....................x...........x..:...........x...:....:..:..:...........:.....x..:..:.........x.............:..:.....:x..........:.....:...........:.....x.....x........:..x..:..:..:.....x.........x.:.....x........x..:..:..x..............:..:..:.....x........x..x.....:..x.................x.....x.....:....x...x.....:.....:.....:.........:xx..............:..:..:..:.................:...........x...x.:x....:..x..x.....::.x...xxx:..:x.----.....x.x.:x:x.---------.:...---------....:::.x:.x....:---..x..:......x.x.x.-------.....----------------:...x.....---...-------:......--x..:::x.:..:.:x...----...x.:...:x.:.--......x.x.:.xxx..:..-----.:...:.:...x..xx:..xx..------.x..x..:....:xxx:.x.:...x..:...:x.....:.::--.x.......:......x....:.x...-:.x:::.....x...x....::x:.:...x.:... 21M2D653M4I14M9I5M9I17M3D18M7I5M16I10M3I3M7D7M2D18M4D14M2I20M5D23M6D42M2I27M1I35M 702/932 75.3% 985/94230402 0.0% 82/932 8.8% 901460 NA +3238 chr4 + 190214555 15450505 15450504 15450594 90 CCTCTCTTAAAAAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA chr4 - 94230402 9412113 9412112 9412202 84818201 84818200 84818290 90 CCTTTTTAAAGGAGCTGGAAAAAAAAAAAAAACCCACAAGGAAGAGGGAACAGAATAGAAGAGGAAGGACAAAAGGAGAGTAAGCACGAA ...:.:.x..::.:xx::............x.......x:x.::.::...x....x....:..:..:..x..:.::...:x.::x.x... 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 6038392 NA +3396 chr4 + 190214555 15450512 15450511 15450583 72 TAAAAAAAAAAAAAAAAAAAAAACACCCACACACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 21846957 21846956 21847028 72383375 72383374 72383446 72 taaaaGCACAAAAAAAAAAAAAAACCCACCACAGAGAAAGGAGAGGAAAGGGATGAAAGGGAAAAAGAGAGA .....:x.x..............xx..xx....x.....:..:.:....:.:.x::..::.....::.:... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -6396445 -87833957 +3466 chr4 + 190214555 15491480 15491479 15491558 79 CTGCAACCTCCACCTCCTGGGCTCATGTGATTCACTTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGTGCTCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx.x..:.....:...x...x.....xx.x........::::....:....:.:....x...--...... 71M2D6M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% -2705646 -91524756 +3285 chr4 + 190214555 15500066 15500065 15500143 78 AAACCTAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTTTTTAA chr4 - 94230402 50558493 50558492 50558570 43671833 43671832 43671910 78 AAACTTTGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAA ....:.x.x..x:x.xx...::.....x..........::...:....:..:....x.:.x.x.x.x..x........ 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -35058427 -59171975 +3329 chr4 + 190214555 15500080 15500079 15500150 71 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTTTTTAAATATGGA chr4 - 94230402 57691406 57691405 57691476 36538927 36538926 36538997 71 TGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAA ..:x.......:..:x.........:::.x....:x...x.....x.xx..x..:.......x......:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -42191326 -52039076 +3140 chr4 + 190214555 15500088 15500087 15500158 71 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATTTTTTAAATATGGAAAACCAAA chr4 - 94230402 89821282 89821281 89821352 4409051 4409050 4409121 71 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGACAACAAAA .........x.x.......................:..:.xx:x::xx:.:....:x.x.:..x...x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -74321194 -19909208 +5865 chr4 + 190214555 15502416 15502415 15502520 105 TTTTGTTTTTTAGGCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGAGGGAGAAATTGCAAGCAGCGAGGGTG chr4 - 94230402 14554446 14554445 14554550 79675853 79675852 79675957 105 TTTTCTCTTTCAGGCTTGCCCCCTGTGCCTTCTACATCAAGAATGGGATTTTCAGAACTTTCCGTCAGGGAGCGTATGAGAGAGAAACTGAAAGCAGCCAGGGTG ....x.:...:......:..:..x:.x.....x..x..x....::..x...x.....:.....:.x....::..:.....:......:..x.......x...... 105M 80/105 76.2% 105/94230402 0.0% 0/105 0.0% 947970 NA +5291 chr4 + 190214555 15511255 15511254 15511427 173 TGGCTTCCCTTCTGCAGAAGAGGCCTATAACTTCTTTACTTTCAACTTTGATCCCGAACCAGAAGGATCAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG---GAAATGGTAT chr4 - 94230402 14557639 14557638 14557805 79672598 79672597 79672764 167 TGATTATCCTTCTGCTGAAGAAGCGTATAACTTCTTTACCTTAAATTTTGATCCTGAACCAGAGAGTATAAAGG------CTGGAGCACGGAAAAG-GAGTGAATTAA--ATGAAGAAGAGGCAGAAGAATACGTAGAAACCCATGAGGAAGAACAAGAGGAGGATGAAACGGTGT ..::.x:........x.....:..x..............:..x..:........:........::.xx:.:...------.x::....x.:x.x..-.x.x...:...--.x..:..:....x..::...x.x.x....x.x.x..x:x...:.x:..:::..---....:...:. 74M6D16M1D11M2D53M3I10M 114/164 69.5% 167/94230402 0.0% 12/164 7.3% 953616 NA +7081 chr4 + 190214555 15516613 15516612 15516760 148 CTTCATCTACAGGAAAGAAGATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAAGGCCGCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGAGCTTGAAACACTGTATAAAAAGGTAG chr4 - 94230402 14560983 14560982 14561130 79669273 79669272 79669420 148 CTTCATTTGTAGGGGAAAGAGTGGTTTGGTGATGATGGCAGAATCTTAGCATTGCCTAATCCAATTAAACAGTCTTCTACTAGGCCTCCAGTATTCTCATTGGAAGAAGGCATTGCACCAGAACTTGAAACAATCTATAGAAAGGTAG ......:.::...::.:.:::........x.....:.....:...:....x:....x..:..x..:..:.x:.:.:..x.x.....x......:.xx..:x...:x.::.....:x:x....:.........x.x....:........ 148M 104/148 70.3% 148/94230402 0.0% 0/148 0.0% 955630 NA +3191 chr4 + 190214555 15517023 15517022 15517094 72 CTGCAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTTTTGAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:...x.:xx:x..:.:.......x.:xx...x.xx.x..........::.........:......x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -2680103 -91550299 +10080 chr4 + 190214555 15527468 15527467 15527665 198 AGTCAGCATGTGATCAGATCTGGAGACCCTCCTGGAAATTTCCAACTGGACATTGATATTTCAGGGTTAATCTTCACTCATCATCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTACCTTGCAAGACACCAGAGAAACAAGGCGAAATTTCTTACTGATAAGGTACATGTG chr4 - 94230402 14561256 14561255 14561453 79668950 79668949 79669147 198 AATCAGTATCTCATTGGACCTGGAGATTTTCAGGGGCCGTTTCAACTGGATATTGATATTTCTGGACTAATATTCACACATCATCCCTGTTTTAGCCGTGAACATGTGTTAGCAGCTAAACTGGCTCAGTTATATGATCAGTATTTAGCCAGAAAACAGAAGAATCTTACTGAACTTCTCACAGACAAGGTATTTTTg .:....:..x.x..::..:.......:::..xx..:xxx..:........:...........x..::....x.....x....................x..:.....x..:.....:..:.....:...........:.....::.x..x...x.x....::..:xxx:.x:..:....:..x..:......:x.x.. 198M 145/198 73.2% 198/94230402 0.0% 0/198 0.0% 966212 NA +10678 chr4 + 190214555 15532720 15532719 15533342 623 AAAAATATTGGTAATCTAGTGAATATTGAAAATCTCCAAGG----------------CATGCAATA--ACAATACTTCATCTCCTCAGTGTGGAACTTGTGATTTGTGTTAACACAGGAAGACTTTACATGTATTTGTTGCTAACTAGGACAGCAGCATACTTTGCTGTGT----TTATAATAAT--TTAGTCCATGAGAACTGCCTTTGTTTTCTTACCT-----TCAAAGG---TGACT-----ATTTGTTGAAGGATGCATAGTTTTAATACAAATTTT-------TTAAG---------------------TACTTAAAGTCAGATCTGCCTAAAGAGAACAAAATCAAG---TAAATCTCTCA-AGACAGGTTGAC---ATCCTATTGTCTTTACATTCACATTTGTATTTAGTTTTCTGTAC----TTGTTTCAAAATACGGTAGCTATCAA----ATTGAATATACAATCACTGTAGCATT----ATTAATTTCTTTTGC-------------------AAACACACCTGACTTTTTAATATATACTCATGTGTTATTATATCTTGCAGACAAACAAGAAAATTCCGTGATGCTGAACAAGAAAAAGATAGAACATTGCTTAAGACTATCATAAAAGTTTGGAAAGAGATGAAATCCCTTCGAGAGTTCCAGAGATTTACAAATACTCCCTTGAAACTTGTTTTGAGAAAGTAGGCTTT chr4 - 94230402 14565954 14565953 14566630 79663773 79663772 79664449 677 AAGAGCCCTGTTAATTTTGTTTGTGTAAAGAATCTTTTAGGTCTACTTAGATTACTTCATACATTACCACATTACTTCATCTTT----------ACGAGTGCTTTTTAGTGGAACTAGAAG------CATGT---------TAAGTATAA----AACATATTTTGTAATGTATGATTCTAATAAGCATTACTTCATAGCAGCAGCATTAGTTTCCTGGGCTGTTGTTTACAGGCATTGACTTTAAAATGTTTTTAATGATGTACAGCTGTAATAAGCATTTCAGAAGACTTAAGAAGTCTCCAGAGAATGAACTGTAATTGAAGTCAGAT-TGTCCAAAGTTCATGAGACGAGAGCCTAGAGTACTGATAGTGAGGAAAACCAAATCCTGTCATCTTCAAGTTCA--------TCTGGTTTTTTATGCGCCTTGGATTTAAACCACTGCAGCCATCAATCACACTGAAAAGCACATCAAT-TGGCTTTTGGTATCTAAGCTTTTTGCTGTATTGTTCCACTGAGTTATACAACTCTGATTTTGTA---------CGTATGTTTATATAT-TTCTAGGCAAACCAGAAGACTTCGTGATGCTGAACAAGAAAAAGATAGGATGTTGCTTAAAAGTATTATAAAAGTTTGGAAACAAATGAAGTCCCTCCGTGAATTTCAGAAGTTCACTAACACGCCCATGAAGCTTTATTTGAGGAAGTATGTTTT ..:.::x:..x....:.x..xx:.:.x:.:.....::x...----------------...:..x..--...x..........::----------..xx...x...x.:x.::x..x:....------.....---------...x..x:.----.:....:....:x:...----..x......x--...x.:...::x.:.x..x..x....:..x:x..-----.:.x...---.....-----..x.x..x..x....:.:..:.x.....x:x....:-------.....---------------------..x..:.........-..:.:....xxx.::.:.:x.::---..:.x:x..x.-..xx...xx:..---.....:.::....:.x:....--------.:.:.....:.:.:.----.x.x..:...x:..x.:...:.....----.:....x.xxxx....x.-.:..x..----..:x.xx::......-------------------.x...xx:....:...x..---------.:.:....xx.....-..x:..:.....x....:.:.:..........................:.::........:.x...:...............x.:.....:.....:..x..:..:....::..:..x..:..x...x....:...xx......:.....x.:... 41M16I9M2I16M10D27M6D5M9D9M4D17M4I10M2I34M5I7M3I5M5I36M7I5M21I15M1D23M3I11M1I12M3I21M8D15M4I26M4I18M1D7M4I15M19I19M9D15M1D156M 402/574 70.0% 677/94230402 0.0% 152/574 26.5% 966766 NA +10465 chr4 + 190214555 15536907 15536906 15537082 176 AATTATTTTAAAGGGAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAAATAAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGCACAGAAGATGGAAGAATACAGAACGTCGTTACAACAGTGGAAGGCCTGGAGGAAAGTGCAAGTGTGT chr4 - 94230402 14567001 14567000 14567176 79663227 79663226 79663402 176 AATTGTTTTGAAGGGAAGAAGTTGATCAGAGATCAGATGAGAAAGCATATGAAGCAGAAATTCAGGCTGAGATAAATGAATTACAAGAAGAATACATGGAAGAATATGAAAAGAAAATGGAGGAGTATAAAACTGAGCTACAAGAGTGGAAATCCTGGAAGAAGGCACAGGTTTGT ....:....:.......:...:...:....:.x.......::......................:.....:....:....:.::x......::...:...:..:..:.x.x....:.....:..:..:.:...xxx.:.....x.......:x......:...:.::..:..x... 176M 134/176 76.1% 176/94230402 0.0% 0/176 0.0% 969906 NA +10180 chr4 + 190214555 15540830 15540829 15541016 187 TTTGCAGAGCGGAGGTCTCGAGAAGGGAGGATGTAAAGAAGCGCTCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCCGGAGAGTTTAACACTTCAGGT chr4 - 94230402 14568643 14568642 14568829 79661574 79661573 79661760 187 TTTACAGGGCAGAGGTTTTACGACGAGAAGACGTAAACAAACGCTCTGCATTTATAAAAGTCTTTTTCAACTCCAAAGAAGTATCAAGGACTGTTACTCGACCACTAAGTTCAGATTTCAGAGTTCACTTTGGACAGATTTTCAATTTACAAATTTTCAACTGGCCAGAGAGTTTGAAGCTACAGGT ...:...:..:.....:.::x..x.:..:..:.....x..:.....x.::.x:x.......x:.x......xx...:..:..:..x.....x..:.x...:......:.xx....:...x.............:..............:.....xx..........:........:.x:..x..... 187M 141/187 75.4% 187/94230402 0.0% 0/187 0.0% 972187 NA +9477 chr4 + 190214555 15550817 15550816 15551021 205 TTTTCAGGTCTATGAAACTGTCGGACAC-AGTAGTCCCACCTTGCTAGCAGAAGTGTTTCTGCCTATTCCTGAGACTACTGTTGTCACTGGAAGGGCTCCTACTGAAGAAGTGGAGTTTAGCAGTAATCAGCATGTGACACTGGACCACGAGGGAGTTGGAAGTGGTATGGAAAGCTAATATCTTCAATGGTTCACTGTTTCATTG chr4 - 94230402 14569665 14569664 14569867 79660536 79660535 79660738 203 TTTCTAGATCTATGAAACAA-CGGGCATGAGCAGTACCACCTTGCTGGCTGAAGTTTTCATACCTGTTCCTGAGACGACAGTTCTGACAGGCAGCGCTCCCATGGAGGAGATAGAGTTCAGCAGCAATCAGCGTGTGATGCTGGACCATGAAGGAGTTGGGAGTGGTAGGGAATGTC--CCTCTTCCTCAATTCAGTACTTCAGTG ...::..:..........x:-...:..:-..:...x..........:..x.....x..:x.:...:..........x..x...x.x..x..x..x.....:.:x..:..::.:.....:.....:.......:.....::........:..:........:.......x....x.::--:x.....xx:::....x.::....x.. 20M1D7M1I148M2D27M 149/202 73.8% 203/94230402 0.0% 4/202 2.0% 981152 NA +8557 chr4 + 190214555 15553147 15553146 15553310 164 TGTTTCCCC-----AGGAGTGCCCTTCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACCTTTAATTCCTCCATTGTCACAGCAGAACATCGGATTTCGGAGGTAAT chr4 - 94230402 14570884 14570883 14571052 79659351 79659350 79659519 169 TATTTTCCCTTGATAGATGTATCCTTTTCATTTGAAGCTGATGGTAGCAATCAAATGACTTTAATGACTTCTGGGAAGGTATCTAATAGTGTTTCTTGGGCAGTTGGAGAGAAAGGAATCCCCCTGGTTCCTCCAGTATCTCAGCAAAACACAGGAATTCCAAGGTAAT .:...:...-----..:x..::....:.................:..:..:..:x.....:.:.....:..x.....:..:...x.......xx.x.....x:.......:..x..:..x..::.::........x.:..x.....:....:x...x...x:....... 9M5I155M 123/164 75.0% 169/94230402 0.0% 5/164 3.0% 982263 NA +8833 chr4 + 190214555 15555066 15555065 15555219 154 TTTCAGTGCTTTGAAGAAAGCAGATGCCATCTCATCTATTGGCACATCAGGACTGACAGACATGAAAAAATTGGCCAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATGACCCCAACAATGCCCCTTTGATGCAGCTTATCTCGGTATGTAGC chr4 - 94230402 14573529 14573528 14573682 79656721 79656720 79656874 154 TTTTAGTGCTTTAAAAAATATCGATGCTATTGCATCCATTGGCACATCAGGCTTAACTGACATGAAGAAACTGGCTAAGTGGGCAGCAGAAACTAGACTTGATCCGAATGACCCAAACAATGCAGCTCTGATGCAGATGATTATGGTAAGTGGC ...:........:..:..x::x.....:..:x....:..............x:.:..x........:...:....:..............:x.:.::..:..:..:........x........xx..:........x.x..:x:....x..:.. 154M 117/154 76.0% 154/94230402 0.0% 0/154 0.0% 981537 NA +11884 chr4 + 190214555 15557286 15557285 15557510 225 ATTTTCCGTTTTTTATAGGTTGCTACCAGTGGTGAATCCTATGTCCCTGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTTGTTTCAGATCAAGAATTAAATAGATCCAAACGATTTAGGCTTCTTCATCTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAAATTATGGAAAAGGTATTCCAGGTA chr4 - 94230402 14574440 14574439 14574664 79655739 79655738 79655963 225 ACCTTCTGTCTGATTTAGGTTGCCAGTAGTGGAGAGGCACATGTTCCTGACTTCTTCAGACTGGAACAGTTGCAGCAAGAGTTTAATTTTGTTTCTGATGAAGAATTTAATAGATCAAAGAGATTCCGACTCCTGCAGCTCAGGAATGAGGAGGTGGCAGAGTTCCGAAACTATAAGCAAGTCCCTTTGCATGAACGAGAAATCAGTGAGAAACTTTTCCAGGTA .::...:..:.xx.x........:.x:.....x..:x.x:....:.....:.....:........:...:....:..:........:........x...x.......x........x..:x....:x.:..:..x..x..:..:.::x.:......x....:........:...........:..xx.x:....x........:.xx..:..:x.x......... 225M 168/225 74.7% 225/94230402 0.0% 0/225 0.0% 982846 NA +5095 chr4 + 190214555 15560519 15560518 15560655 137 TTCTTTCCC-----CAGGTTAGAGAATCAGTGATAAATCGTTTCTTAATTGCAAAACAATATTTTCTTCTTGCTGATATGATAGTAGAAGAAGAAGTTCCCAATATCAGGTAAAAATAATCAAAGCCATTATTATCAATTCT chr4 - 94230402 14578822 14578821 14578956 79651447 79651446 79651581 135 TTCTTTCCCACTCATAGGTTCGAGAATCAGTAATTAACCGTTTCCTAATAGCAAAGCACCATTTCCTTCTCTCTGACCTGGTCAATGAAGAGGAGATTCCAACTCTGGGGTAAA-------GGAGCTGCCTTCATTGATTCT .........-----:.....x..........:..x..:......:....x.....:..x:....:.....:x....:x..:.x:xx.....:..::....x.x.x.x:......-------::...::::x.:..::..... 9M5I100M7D21M 92/130 70.8% 135/94230402 0.0% 12/130 9.2% 981697 NA +3879 chr4 + 190214555 15561527 15561526 15561639 113 TTTTCATATTGTTTTTTT--------TTTCTTTTCCTTCCTTTTTTTCTGCTTTACTTTCTGCATTAAGTTCTGAAGGCTCAGGGTATGTTCTTTCTTCTTTTAATTTCAGTTCCTTCTTG chr4 - 94230402 14579828 14579827 14579946 79650457 79650456 79650575 119 TCTGCATTTTATTTCTTTCCTATTTGTTTTTTTTTCCCCCTTTGGTTCTGCTTTGCCTTGGGTTATAAGTTCTGAGGGTCCAGGGTATGTTGTGGCATATTC--ATTCTGTTTCCTTTGTG .:.x...x..:...:...--------...:....:.::.....xx.........:.:..xx.:xx..........:..::...........x.xx.x.x..:--...:::x......:x.. 18M8I76M2D17M 78/111 70.3% 119/94230402 0.0% 10/111 9.0% 981699 NA +10458 chr4 + 190214555 15563337 15563336 15563524 188 CTGTTCTGTAATCATTAGCATTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAGTGAGGT chr4 - 94230402 14580315 14580314 14580502 79649901 79649900 79650088 188 CTGTTTTATGATTGTTAGCATTTTGGGACTCGGCCTCTTTAAACTGGCAGAGCCAAAACGGCCGTTAAAGCCAAGAAGAAAGGAAAGGAAGAAGGTCACAGCACAGAGTTTATCAGATGGAGACATCAAGCTGTTAGTGAACATCATTAGAGCTTATGACATTCCAGTAAGAAAACCAGTCACAAGGT .....:.:.:..::.............x..x:....:..:..:........:.x...:..:..::.:x:......:.....:.:xx..........x.....x..:.:::.:..x...........x......:.:........::.xx.......:...........:..:..:..:.:x:::.... 188M 138/188 73.4% 188/94230402 0.0% 0/188 0.0% 983022 NA +8042 chr4 + 190214555 15567659 15567658 15567805 147 TTTGCTCTTGATTTTAAGGTTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAAGAACTAGAACTTCCATTTAGGT------------AAGCATATTTTCCTCTT chr4 - 94230402 14583408 14583407 14583566 79646837 79646836 79646995 159 TTGGATCCCTGTTTACAGGTTTTAGTCCGTCCATTTGTAGAAGTTTCTTTTCAGCGAACAGTCTGTCGAACAACAACAGCAGAAGGTCCAAACCCCAACTGGAATGAGGAACTTGAGTTTCCATTTAGGTACACCAAAATGAAATCAGATTTTCTTCCT ..x.x..::x:...xx..........x.....x...........:........:........:..:.:x..:..x..:..x.....x........:.:.........:.....x..::............------------..x..x......:..:. 130M12I17M 116/147 78.9% 159/94230402 0.0% 12/147 8.2% 984251 NA +7452 chr4 + 190214555 15569285 15569284 15569415 131 TCTTGCAGGGCTCCTAATGGAGATTATAGCACAGCCAGTCTGCAGTCAGTGAAAGATGTTGTGTTCATTAACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGTAAGTTCTCAGTTTTAAGAAAGACA chr4 - 94230402 14583646 14583645 14583772 79646631 79646630 79646757 127 TTTTTCAGAGCTCCTAATGGTGACTACAGCACCCATAGTTTGCAGTCAGTGAAGGATGAAGTGTTCATTAATGTTTTTGATGAAGTACTTCATGATGTTACAGAGGTGAGTTCATAATT----GAAGGACA .:..x...:...........x..:..:.....xxx:...:.............:....xx...........::................x........:x:......:.....x:.:..----...:.... 119M4D8M 102/127 80.3% 127/94230402 0.0% 4/127 3.1% 985639 NA +7581 chr4 + 190214555 15570395 15570394 15570505 111 TAGGATGACCGTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCATTTAGCACAATATATTTCCAAGCAAGGGTAAGTATC chr4 - 94230402 14584949 14584948 14585059 79645344 79645343 79645454 111 TAGGATGATCGTGACAGAGGAAGTGGTATCCACACTCGTATCGAGCGGCGCTGGCTGGGATGTGTTAAGATTCCCTTTACTACAATATATTTTCAGGCTAGGGTAAGTGTC ........:.....x...........x.....:........:...x.:.:...............x..:..x..x....x:...........:..:..x.........:.. 111M 93/111 83.8% 111/94230402 0.0% 0/111 0.0% 985446 NA +3396 chr4 + 190214555 15572187 15572186 15572277 91 TCAATTAAACCTCACAACACAATTGG------------CATTGTCATCCTCATTTTATAAATGGAGAAACAGAAGCCTAGAGAGGTTAAGTAACTTGCTCAAA chr4 - 94230402 10729157 10729156 10729259 83501144 83501143 83501246 103 TTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGA .::...x.:........:..xx:..x------------:.:.:...x.::.......:.::...::....x..:..x:.x.x...........:....:..:. 26M12I65M 62/91 68.1% 103/94230402 0.0% 12/91 13.2% 4843030 NA +10280 chr4 + 190214555 15574148 15574147 15574333 186 AGATTGATGGAACATTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTTAAGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGGTAACTA chr4 - 94230402 14586803 14586802 14586988 79643415 79643414 79643600 186 AGATTGATGGTACATTCAAGGTGAATATTCCTCCGGTACTCCTTGGCTACAGCAAAGAGAAGAACCTGGGCATTGAGAGAGGGTATGATTCTGTGCGAAACCTGAGTGAGGGCTCCTATATAACACTGTTCATTACCATTGAACCACAGCTCATTCCTGGAGAGTCGGTCAGGGAGAAGGTAACTA ..........x.....:..::.::.......:..:..x..:..x........:..:...x::..:x..:x:x.....x.:..x.x.........x....:.:.:.....:........:..x..x..x..:...........:..x.....x:.............x:.:x.:..:.......... 186M 140/186 75.3% 186/94230402 0.0% 0/186 0.0% 987345 NA +3251 chr4 + 190214555 15578789 15578788 15578901 113 TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTAATAGAGACAGGGTCCCATTATGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAGGTGATCCTCTTGTCTCAGCCTCTC chr4 - 94230402 18668476 18668475 18668584 75561819 75561818 75561927 109 TTTGTTTGTTTGTTTGTTTTCTTTCTTTTTTTTAACAGAGAAAATGTTACATGGTTTTACTTTAAGAAGTGTCAGAAT----AATTAAAGTGAATTTATTGTTGTAAACTCTC ...................x:..x:..x.......:.....x.:x..:x...x:.x..:.::x::xx:..x...:.x.----.::.x.:....x::.x....:x:.:x..... 78M4D31M 70/109 64.2% 109/94230402 0.0% 4/109 3.7% -3089687 -91140715 +13016 chr4 + 190214555 15579946 15579945 15580181 236 CATGAAGTCT--TTCTTTTTGAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTGCCTTAAAGTTTCCAAATCGTCAGTGCCTTACAACAGTAATTGATATAAGCGGAAAAACTGTTTTTATCACACGTTATCTCAAACCTTTAAACCCTCCTCAGGAGCTCCTTAATGTCTACCCCAATAATCTACAGGCAACTGCAGTAAGTATTT chr4 - 94230402 14588523 14588522 14588760 79641643 79641642 79641880 238 CATGAATTCTACTGTCTTTTGAAGTTTGATACCCAAGAAGATGAGAAATTGCTTCAAGCAGCAGAAAAATATGAAGCTGAATGTACGTCGAAGTTTCCAAGCCGTCAGTGCCTAACAACGGTAATTGACCTCAGTGGAAAAACAGTTTTTATTACCAGATACATCAAACCCCTCAATCCGCCCCAGGAGCTCCTCGATGCCCTCCCAAACAGCTCTCAGACAACAGCAGTAAGTGTTT ......x...--.x::.............xx.:..:..............:.........:.x..:..:.x.x...........:.x.::..........::...........x.....:........:x.x..:........x........:..xx.x..:x.......::.x..:..x..:...........::...:.:x...x..:.::::x...:....x.........:... 10M2I226M 181/236 76.7% 238/94230402 0.0% 2/236 0.8% 991423 NA +3604 chr4 + 190214555 15580621 15580620 15580701 81 GAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGTCTAAAGGTACCAGGGATGACAGTTTCCAT--ATGTTGGAAAA chr4 - 94230402 29914140 29914139 29914221 64316182 64316181 64316263 82 GAGCAAAATCTTGTTTAAAAAAAAAAAAAAGTAAAAAAATCTCAGAGATACCAAGAATG-TATTTTTCATAGATGCTGGAAGA ......:.:::...:.x.............:x.......x:::.:..:.....:.:...-:.x...:...--...:.....:. 59M1D10M2I11M 59/80 73.8% 82/94230402 0.0% 3/80 3.8% -14333519 -79896883 +6745 chr4 + 190214555 15586122 15586121 15586255 134 AAATTATTTTTGTAAAGCTCATTTTGATTATACAGGAACTGGTGGCTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCACATCTGATGTAAGTAGT chr4 - 94230402 14589201 14589200 14589333 79641070 79641069 79641202 133 AAACTGTTGTTTTTTGTTTTGTTTTGTTTTT-CAGGAATTGGTGGCTCGATATGTTGCTTTGATTCCATTCTTGCCAGATAGTGTGTCATTTGCTGGAATTTGTGACCTGTGGTGTACATCAGATGTAAGTAAT ...:.:..x..x.xx:x:.::.....x..x.-......:................xx.:........x........x..:.x...x.......x...x..:........x...x.:.....x..........:. 31M1D102M 103/133 77.4% 133/94230402 0.0% 1/133 0.8% 996921 NA +9217 chr4 + 190214555 15587796 15587795 15587938 143 TTTTTTTTTCTTTTTGTCAGCAATTTCTTGATCTCCTGGCAGGGGATGAAGAAGAACATGCAGTACTATTGTGTAATTACTTTCTGTCTCTGGGTAAGAAGGCCTGGCTGTTGATGGGCAATGCTATTCCTGAGGTAAGACCA chr4 - 94230402 14590651 14590650 14590793 79639610 79639609 79639752 143 TTTTTTTTCCCCTCTATTAGCAATTTCTTGATCTTCTGGCGGGGGATGAGGAAGAACATGCCGTGCTCCTGTGTAATTATTTTCTTGGTATGGGGAAGAAAGCCTGGCTAATCATTGGAAATGCTATTCCTGAGGTAAGAGCA ........:.::.:.:.:................:.....:........:...........x..:..x:..........:.....xxx.x....x.....:........:x.x..x..x.....................x.. 143M 117/143 81.8% 143/94230402 0.0% 0/143 0.0% 997145 NA +7285 chr4 + 190214555 15589534 15589533 15589705 172 TCTTCTTTC-AGGGTCCAACTGCCTATGTGCTAACTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATGGACAATTTGATACATTCTGTCCCTTGAAAAATGTGGGCTGTTTAATAGGTCCTGACAATGTAAGT-ATTAACATTTCTTCTTAAAT chr4 - 94230402 14591669 14591668 14591842 79638561 79638560 79638734 174 TTTCCTTTCTAGGGACAAACTGCGTATGTGTTAACTTTGGAGCAAAGTCAGTATGTGATTTGGAATCCCAGCACTGGCTGCTTTTACAGGCAGTACGATACTTTCTGCCCCTTGCAAAGCGTGTACTGTCTGATCAGCTGCGATAACGTAAGTGAACTCCGTGTCTTCTCACAT .:.:.....-....x.x......x......:......x.......:...:x...x.:..x.........x...x...x:::.....::.:..:.x:.....x.....:......x...::...x:....:.:..x:.::x:..:..:......-.x:xx.:.x......:.x.. 9M1I143M1I20M 122/172 70.9% 174/94230402 0.0% 2/172 1.2% 997865 NA +8632 chr4 + 190214555 15596063 15596062 15596210 148 AATGTAGTCTTGTCTTTCT-TAGATTTGGTTTAATATTCAACGATATGAATCTCCACTAAGGATAAATTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTTCTTTTCAAGAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGGTA chr4 - 94230402 14592836 14592835 14592984 79637419 79637418 79637567 149 AAAGCAAACTTGCTTTCTTCTAGATTTGGTTTAATATCCAACAGTGGGACTCTCCAGTAAGGATAAGTTTTGATATCAGCAAACCAAAACTTTGGAAGCCTTTCTTTTCAAGAAGCTTACCATACCCTGGGCTCTGCAGTGTTCAGGTA ..x.:.:x....::..::.-.................:....::.:x..x......x.........:.......:...x..::..x..:..x.....::.................:.x.....:.....x..:.x............. 19M1I129M 117/148 79.1% 149/94230402 0.0% 1/148 0.7% 1003227 NA +12623 chr4 + 190214555 15599504 15599503 15599709 206 AATGGAATTTATGTTTTGTGAACAGGATTGAAAAAATACTAAAAGAAAAAATCATGGACTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTTAGAAAAAAGTCAAGGAGAAGATGTAGAAGATGACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGGTA chr4 - 94230402 14594125 14594124 14594329 79636074 79636073 79636278 205 AATAATAACTGTATTTTATTA-TAGGATTGAAAAAATACTGAAGGAGAAAATTATGGAATGGAGACCAAGGCATTTAACTCGCTGGAACAGATACTGTACCTCTACCCTACGTAACTTCTTGCCTCTGCTGGAACAAAACCAAGGCAAAGATGTAGAAGATGACCATCAGGCAGAGCTGCAAAAGCAGCTGGGAGATTACAGGGTA ...::x.x:.:.:....:.x.-:.................:..:..:.....:.....x.....:...x.x...:.:.....x.....:..:..:...........:..:...x..............:.:...x...::.....x:...................:x::.....:....x...:...........:......... 21M1D184M 163/205 79.5% 205/94230402 0.0% 1/205 0.5% 1005379 NA +11367 chr4 + 190214555 15601223 15601222 15601426 204 TTTTTTCCCTTCAGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAATGTTGAATTTGCTTTAGCTGTATACATACACCCATACCCCAAAAATGTTTTGTCTGTTTGGATCTATGTTGCCTCTCTTATACGCAACAGGTAAT chr4 - 94230402 14595001 14595000 14595204 79635199 79635198 79635402 204 TCTCTTTCTTCCAGGTGTCTGGATTTCCTATTCATATGCCATTTTCTGAAGTCAGACCTTTAGTAGAAGCTGTACACAGCACTGGAGTTCATACCATTGATGTTTCCAATGTTGAATTTGCCCTAGCTGTGTACGTTCATCCTTATCCCCAAAATGTTCTCTCCACATGGATTTACGTTGCTTCACTTGTACGGAATCGGTAGT .:.:..:.:.:...x.x............x....:.....x.x.........x.::......:.x..x.....::.:..:........x....x:.........:.:..............::.......:...:.x..:..x..:...x........:.x..:::x.....:..:.....:..x...:....x..:x....:. 204M 154/204 75.5% 204/94230402 0.0% 0/204 0.0% 1006222 NA +3912 chr4 + 190214555 15602645 15602644 15602718 74 CTGCAGCCTCAACCTCCTAGGCTCAAGCAATCCTCACACCTCAGTCTCTCAAGTAGCTGGGACTACAGGTACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..x..:..:..:.....::x.:.x..x:x.....:..:............:......x..:... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -2594481 -91635921 +17428 chr4 + 190214555 15605336 15605335 15605832 497 AAAAGATCTGCAAAGCTTGGTACAGTGTTAATGTGTAAAGAG-----AACCAATCACCTCCATGGACTTTAAAACTCAAAATTATCTATGAAATACTTTAAATGACATGGCATTACCAACATTCTTTAAAGCATTTCAT-TTAAAAGAAAAATGTAAGACTGTTCTCACCCTTTTGAAA------------AGACCTAATCCCTTTCTAAACCAAAAGTATAATTTGCAAGA--GAAACAACATT--ACAATTCACTGGTAAATTAAGATTTCTGAAGTTGTAAGAAATG--GGGCCAA---AACAAGTCACGCTCAAAAAGGGATGGTTAACACAAGAAATGTGCTATGAGTAAAGTGCATGAAAGAAAGCCTGCTCAGCTAAATGAAGTAGAC--AAAGATCAGAAGTCAAGGGTCATTCGCCAGAGCGGCAGCAGGCTCGAAAACCACACTGCAAATTCTGGCATCCACTGGCGGTATCAGCATGAGGACCTGTATGAAAACAGAA-AAATGTGAAAGGAGGAA chr4 - 94230402 14597578 14597577 14598064 79632339 79632338 79632825 487 AAATTAGCCGCAGAGCTTTATATTGTACTGATGGATTAAAAATAAGAAACCATTCACTT-------------AACACAAAATAATCCAT---------TAAAGTATATTTAAGTGCCAAA---CTTGGAAGAAAGTGGCATTAAAAAAAAAATCTGCATGTTTTCCCATCTTCCCCAAATAAAGTAAAGGAAAACCCAACACCCTTC-AAACCAGATG---AGATCGTGAGATTGTTACAACACTGTACAGTACACT-------TAAGATT-CTGAAGTTATGGGCAGGGTCAGGCTAGTATAACAGATCTCACTCCAA---GGATTGTTAACACAAGATGCAAACTGTAAGTAAAGTGCATGAAAGGAAGCCTGCTCAGCTAAATGAAGTAGACTGAAAGATCAGAAGTCAGCGGTCATTCGCCAGAGCGGCAGCAGGCCCGAAAACCACACTGCAAATTCTGGCATCCACTGGCGGTTTCAGCATGAGGACCTGCACAAAAACAGAACAAATGTGAAAAGAAGAA ...xx.x.:...:.....x:..:x..::.:...x:.x..:.:-----.....x....:.-------------...x......x...:..---------....xx.:..xxx.x.:....x---...x:...x.xx.x::-......:......x.:x:xx.x...:..:.:.:::x...------------.:...:..:x..:...-......:.x.---.:x.:.::...--.xx......:.--...:.x....-------.......-........:.::.x.:x.--:...:.:---....::..x.:...x..---....x............x:::x:..:.:.................:...........................--...............:x..........................:......................................x................:.::.........-..........:..:... 42M5I12M13D17M9D22M3D16M1I39M12I16M1D10M3D11M2I11M2I10M7D7M1D18M2I7M3I17M3D73M2I112M1I17M 353/457 77.2% 487/94230402 0.0% 70/457 15.3% 1007758 NA +13399 chr4 + 190214555 15612254 15612253 15612418 165 AAAAGGCATTACCGTTAATGTTGTCACAGTAGTAAAAGTATTCATCATTCAGAGAAGGACATGCTGAAACCAAATCCTGCAGGCCTGCACCAGTTATAGTAAGACAACCAGAGAGATTAAGGTGCTCCAAATAAGGCAGCCCTCCTCCCAGAGTCAAAACCCTGT chr4 - 94230402 14603519 14603518 14603683 79626720 79626719 79626884 165 AAAAGACATTACCGTTAATGTTGTCACAGTAGTAAAAGTGTTCATCATTTAGAGAAGGGCATGCAGAAACTAAATCCTGCAGGCCTGCACCAGTTACAGTGAGACAACCCGAGAGATTGAGGTGCTCCAAGTGTGGCAGTCCTCCTCCCAAAGTCAAAGCCCTGT .....:.................................:.........:........:.....x.....:.........................:...:........x........:...........:.:x.....:..........:.......:...... 165M 149/165 90.3% 165/94230402 0.0% 0/165 0.0% 1008735 NA +3145 chr4 + 190214555 15621904 15621903 15621986 83 CTGCAACCTCTACCTCCAGGGCTCAAGTCATCCTCCCACCTCAGCTTCCTGAGTAGCTGGAACTACAGGTGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx.x..:.x...:......xx.:.x.xx:x......:.::::................x.....--....::.. 73M2D8M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% -2575222 -91655180 +36336 chr4 + 190214555 15625248 15625247 15626014 767 TCACCTGAGACCATGGTCTGTGATCTGATAACATCCAGATAAACTGAGAAACAGAAGTACACGTCCAGTCTCTTGATCAGATTTTTCACTCCCAAAGTAAATTAAGTCTTTTCCCCTAGGCAATCTAGTCCTTGCTGCTTTTCTACACATTGCAGAAGATTCTGGGAGTGATGACATAGTTCTTAAAGCTGTTCCTGTACAACAAAATGAGTGACCACAATACGCAAAGGCTGGAGAAGCACAATGCTGCTGCCAACAGACACTAGTCCTTAGTCCAACAATGTCCTTACTAAAACAACCAGAGGTGGAACAACTAAAGTTGGATGCTGTTTCCATTACACAAAGACTTTCAACATTTCTATGTCTCCATTCCACAGTATCTTCAATATCAGCCAAATCTTCAGCATCTAACATCCACACATAAGGAGAAGTGAAATTCTCAGAAGAAACAGGCTTAGTCCAGGGGTGTTCATTATCTATTTCTTCTCCAATGCCCTTGTTAGTTAAATCGTGCAAACAGGCATACTGCTTGGTGGACTGCATGGTAATGTCTTTATTTTTCCACGCAGTTGAAGTAATTTTGCTTGTAGATGTTTTCAAAAAGCCACTT---TGATGAGATGTCAGAATTCCAAGAGCTCTGGAAATCTTCTCTAGGGCCACATCTGTGATTTTCTCACAACCAGACAGATCAAGATGCCGAAGACTCTGGCAGCAACCAAGCCAAGACCAACTATAATTAAAAGACAAGACTATTAATGAATATTGTT chr4 - 94230402 14605760 14605759 14606516 79623887 79623886 79624643 757 TCACCTGAGAGCACGATCTGTGATCTGGTAACACCCAGACAGACTGAGAAACTGAAGAACTCGTGCAGTCTCTTCATCTGGTTTGTCACTGCCAGAGTATGCCAAGTCTTTTTCCTCTGACTGTTTAGTCCTTGTTGGTTTTTTGCACAGTGCAGAGGACTCTGGAAGTGCTCGAATAGTTCTTAGTGCTGTTCCAGCACAGCAAAATGAGTGACCGCAGTAAATGAAGTCAGTAGAAGCACAGTGCTGCTGCCACC---CTCTAGTCCTTAAACCATAAATGTCTCTATT---GCAGCAAGATGCAGAACAATTAATGTTGGACGCTGGCTCCACCAGACAAAATCCTTCAACATTTCTGTGTCTCCACTCTGCAGCATCTTCAATATCAGCTAAATCATCTGCGTTCAGCATCCACACATAGGCAGAACTGAAGTTTTCAGAGCTGTCGGGTTTAGTCCAATGATGCTTACTGTCTGTTCCCTCAATGAGGTTTTCATTGTTGATTTCATGCGAACAA------TTCTTGGTGGACTGCAGAGTAATCTCTCTGTTTTTCCACGAAGTCTTAGCATTCCTGTTTCTGCAGCCTTTCAGAATACCTCTGTTATGGTGAGTTGATATGATACCCAAAGCTCTGGAAAACCTCTCTATGGCCACATCGGTGATTTTTTCACATCCAGACAGGTCAAAGTGGCGAAGGTTTTGACAACAACCAACTGAAGACCAACTGAAATAAGATGAAGAG-CCATCACTCGGTTTTGTT ..........x..:.:...........:.....:.....:.:..........x....x..x...x.........x...x.:...x.....x...:....x:::.........:..::x.:.x:.:.........:..x....:.:....x......:..:.....:....x.x:x..........:x........x.:...:..............:..:..x:::...x.x.x.........:...........x.---.x..........:x...xx......::..:.---:..:.x...x.::......:...x......:....x:....::.x.....:x.:............:........:..::...:...............:.....x..x..:.::.:............:.x....x....:..:.....:xx:x.:..:........:x.:..:.:.:.:...:..:.:..xx::.x.:::.::..:x.x.xx..:...:....:------.x..............x:.....x...:.:..........x...:xx..:.x.::..:..x.:x.xx:.....:..x:..x..x---..:....x..x:.x:..x..x.:...........x.:......x.........x........:.....x........:....::..x.....::.:..:..:.......x:x..........:x...x.:.x..x:..-.:..:.x.x::.x..... 257M3D31M3D226M6D84M3I138M1D18M 553/754 73.3% 757/94230402 0.0% 16/754 2.1% 1019488 NA +7332 chr4 + 190214555 15626861 15626860 15626976 116 AAAATAACTAACCTGTCAAATGCAGAATCTGAAATGTCAGTCTGGGTAAGATCCAGATGCTCCAGGTTAGGACAAAGCTCTAAAATCTGCCTAACCTAAAAGGCAAGAAATTGTCA chr4 - 94230402 14608080 14608079 14608195 79622208 79622207 79622323 116 AAATTAACTAACCTTTCAAATGCTGAGTCTGAAATATCAGTTTGAGTGAGATCCAAATATTCCAAGTTGGGGCAAAGCTCCAAAATCTGTCTAACCTGAAAAAGGAAGAATAATCA ...x..........x........x..:........:.....:..:..:.......:..::....:...:..:........:........:.......:...::x:.::...x:... 116M 91/116 78.4% 116/94230402 0.0% 0/116 0.0% 1018781 NA +10704 chr4 + 190214555 15627866 15627865 15628051 186 AGTGTTAATTTAAA----CATACCATTTTGCTGGAAACTGCAGAGCTGTATGCTAATACTAAGGTTTTTACAGAAGTACCAACATATGGTAGAACGTTATGAATTAAGCCATGGAGTAAACGTTTTTCCATTTGTGCAATGCTGATAGCAATTGATTCCTCCGCAGACTCTTCTGTAAAATGAATTCAAA chr4 - 94230402 14608339 14608338 14608528 79621875 79621874 79622064 190 AGTGCTCACTTCAAATTACATACCATTTTGCTAGACGCTGCAGAGCTGTAGGCCAGTACTAATGTCTTCACTGAGGAGCCTACATGTGGGAGAACATTATGAATTAAGCCATGAAGTAAACGTTTCTCCATCTGTGCTATATTAATGGCAAGTGAATCTTCTGCTGCTTCTTCTGCAAAATAAAACCAAA ....:.x.:..x..----..............:..x:.............x..:.:......x..:..:..x..:.x:..x....:...x.....:.................:...........:.....:.....x..::.:..:....x...x..:..:..x.x:.......:.....:..x:.... 14M4I172M 146/186 78.5% 190/94230402 0.0% 4/186 2.2% 1019527 NA +10806 chr4 + 190214555 15630661 15630660 15630835 175 CTTACCAGATTCATCAATGTCAGCATCTTCATCCCACTCATGAAAAGCACGACTTTCATCTTTCCTATTTTTCACCCATTCATCATCAGGTTCAGTATCAAGTTCAGTTGCGGGACCACTATACCAGTCACCTACTCAATGAATAAACAAGTAAAAGGTTCAAAATAATATCAGA chr4 - 94230402 14609364 14609363 14609536 79620867 79620866 79621039 173 CCTACCAGACTCATCTATGTCGGCATCTTCATCCCACTCCTGGAAAGCACGACTTTCATCTTTCCTATTCTTTACCCATTCCTCATCAGGTTCAGTCTCAAGATCTGCTGCAGGACCGCTATACCAATCACCTGCTCACCCATTTA--AAGAAAAAAGATGAAAACAAACTTAGA .:.......:.....x.....:.................x..:..........................:..:........x..............x.....x..x.:...:.....:........:......:....x:x.x.x.--...x....:.x.x....:..xx.:... 146M2D27M 143/173 82.7% 173/94230402 0.0% 2/173 1.2% 1021297 NA +12405 chr4 + 190214555 15636485 15636484 15636689 205 TTTACCTACCTCTGGCCCAATGAACAGGGTAAAGATGTTTCCAAAGCGATCCCGTTTTTGTCAGCTGAGACCATTTCATGCTTACTTGACTGCATCGACATAACTCTTGAGGATTAAGATAGCTGAAAATTGACAGCATTACCTCAGGAGGAAGATGGGTTATACCTGTGGAGTGTTCTGACACTTCTGCTTCTGAAATAAAAAA chr4 - 94230402 14611457 14611456 14611661 79618742 79618741 79618946 205 TTAACTCACCTCTGGCCCAGCGAACAGGATAAAGATGTTTCCAAAGAGATCCAGTTTTAGCCAGCTGTGACCATTCAGTGCTTACTTGGCTACACTGACATAATTCCTGGGGGTTAAGATAACTGAAAATGGTCACCATCACTTCAGGAGGAAGATTAGTAATATTTGTTGTGTGCCCGGTTACTTCAGCTTCTGAAACACAGAA ..x..::............::.......:.................x.....x.....x.:......x.......:x:..........:..:..::.......:..:..:..:........:........x.x..x...:..:.............x:..x...::...x.x...::.x.x:.....x..........:.x.:.. 205M 161/205 78.5% 205/94230402 0.0% 0/205 0.0% 1025028 NA +13592 chr4 + 190214555 15638469 15638468 15638714 246 TACAACTAATAAATTGTTCTTTATATATATGAAT--CTCACCTTTATCTGACTTTTCATCCACGGAATATTTAAAAAACTTCTGTCGCTCTTCAGCATGATTCCATAGGCTAAGACCTCTAAGGAGTTCTGCAGTATCCTTCTGAGAGCAGTGTTGTGCAATCACTTTCTTTTTAATATCCTTAAGCTCTTCATAGGTAAAATATTCCATTAACATGGGCTGAAAAACCTAAATTAAACAAAATATTC chr4 - 94230402 14614659 14614658 14614903 79615500 79615499 79615744 245 TGCATTTGGAAAACTGTTTTCACTTTAATTAAATGCCTCACCTTGATCTGTCTTCTCGTCCACAGAATACTTAAAGACCTTCTGAAGCTCTTCAGCTTGATTCCACTTACTAAGACCTCT---GAATTCTGCAGCTTCCTTCTGTGAGCAGTGTTGTGCAATTACTTTCTTCTTAATATCTTTCAGTTCTTCGTAAGTAAAGTATTCCATCAACATTGGCTGAAAAACCTGAGGCAAAAAAAACAGTC .:..x:.::x...:....:.:xx.x..xx.:...--........x.....x...:..:.....:.....:.....:.x......xx..........x........:xx:...........---..:........:x........x.................:........:........:..x..:.....:..:.....:........:.....x.............:.:x:...x....:.x.. 34M2I84M3D125M 192/243 79.0% 245/94230402 0.0% 5/243 2.1% 1023810 NA +8729 chr4 + 190214555 15640771 15640770 15640913 143 AGAAAAATTATGCTTACCTCCTCTTCCTCTTTCATGTGAGGAAGAAAATCTCTTGTAAAAGCCTCCAATCTCTCTTTCAGTTGTTTTGCATAATTTAACTGTTCATATTCATTCTGGAAACCAAAAAAAAAATACATTTTTAT chr4 - 94230402 14616233 14616232 14616373 79614030 79614029 79614170 141 AGGAAAACTA--CCTACCTCCTCTTCCTCCTTCATATGAGGAAGGAAATCCCTCGTAAAGGCTTCCAATCTCTCCTTCAGTTGTTTCGCATAGTTTAGCTGTTCATATTCATTCTGTAAAGAATACAAAGATTTAACTACTAT ..:....:..--.:...............:.....:........:.....:..:.....:..:...........:...........:.....:....:..................x...xx.x.x...:.x.xx.:.x:... 10M2D131M 115/141 81.6% 141/94230402 0.0% 2/141 1.4% 1024538 NA +15809 chr4 + 190214555 15644487 15644486 15644742 256 ACTTACCTTAACATTCTTCAGTCCCTTTTCAAAGAGGCTAAGCATCTCGGAGAGTTTATTGTCAGAATGTACATTATAAATGGTCTGGCTGCGTTGTTGAAGCAAACCAATAATGTATTCATTTTCAATCTGCTCATGCATTTTGAACTCCTTGAAAGTAGCATACAAAGACTGCAGAAGAGCACGGAAATCGTTGTTGTTGGAAAAATTGGTTTTAGAAAGCT-GAATA----AAAATTTAAAAAGAAAAGTGTAATAAA chr4 - 94230402 14618011 14618010 14618271 79612132 79612131 79612392 261 ATTTACCTTTACGTTCTTCAGCCCTTTCTCAAAAAGGCTGAGCATCTCGGAGAGTTTGTTGTCCGAGTGCACATTGTACACCGTCCGGCTACGCTGCTGAAGTAAACCAATGATGCACTCATTTTCAATCTGCTCGTGCATTTTAAATTCCTTGAACGTGGCATACAGAGATTGCAGAAGAGCCCGAAAGTCATTGTTGTTGGAGAAGTTGGTCTTGGACAGCTAGAATAAAGGAAAGCCCACAAAAAAAAAGTCAGTGAA .:.......x..:........:..:..:.....:.....:.................:.....x..:..:.....:..x.:x...:....:..:..:.....:........:...:.:.................:........:..:........x..:.......:...:...........x..:..:..:...........:..:.....:..:..x....-.....----...::::.x...:....:xx:.:.:.. 224M1I5M4I27M 204/256 79.7% 261/94230402 0.0% 5/256 2.0% 1026476 NA +3045 chr4 + 190214555 15647261 15647260 15647298 38 AAAATAAAAATAAACAACAACAACAAAAAACAATATAA chr4 - 94230402 16124193 16124192 16124230 78106173 78106172 78106210 38 AAAATAAAAACAAACAACAACAACAAAAAACAGTAAAA ..........:.....................:..x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -476932 -93753470 +8793 chr4 + 190214555 15654976 15654975 15655459 484 CCCGCCCCGAGA----GCACGTCCGAGGCGGCGGCCAGGCCGGCTCTGCGAAGGCCTCGCAGCGGGCGGGCAGGCTGCGGGAGCGGGCGGCGCTGACAGCTGCGCAG---GCGGCTACTCGCGCGGCGACGGCACGGGGCTGCGGGCGCGGCGCAGGCCAGGCCGCCCCAAGAACCCAGCCCGCTCCCCATCGCCGCCCGCACCGCCCACAGCGGG--------AGGCT--CAGCGCTCC--------------GTTACCTTGTCGCAGTAGAGCCCCACCAGCTGCTTCATCCGCCAGTGTGGGGCGGTGAAGACGTCCACTTCTTCAGGAAAGGGCGCCATCGCCACTGCCTCAGCCTCCGCCTCAGCAGCCGCGGCCGCCGCCTCTCCATAGACACCCTCGCCGCG---GGGCAGAGGCGGCGCGCCCCCTTGCGCATGCGCCCGCCCCGTCGGCGCGCGCGCCCGGTCGGCTTGGCCGGCGGGGACGCGGGGGCG--CGCAGGCCGCCGCCATGCG chr4 - 94230402 14631942 14631941 14632416 79597987 79597986 79598461 475 CCCACCCCGCGACCGGGCCCCTCCAAGCCGCAGGGCA---CGGCCC----GAAGCACGGCAGGAGGTGAGC--GCTGCGGGGCCGCGGGGCGCTGAGGAGGGGGCAGCCCGCGGCCTCTCCCCC---------------TCACAGGCGCAGC-CGCGCCGG--CGCGCTGACAGCT--GCGCACTCACTAAATCTGCCCTCGCCCCTCAGAGGGAGCGGGCTAAAGGCCGCCACCGCTCCCCACCCGCCCGCTCTCTACCTTGTCGCAGTAAAGCCCCACAAGCTGCTTCATCCGCCAGGGCGGAGCCGAGAAGACGTCCACCTCCTCAGGGAAGGGAGCCATGTTCTCCCCATAGAGCCCAGGCGCTGGCGGCGCTAACGGCGGCGCT-----AACATCCGCCCCGCGCATGCGCGGAGG----GCGCCCCGCCGGGCCTG---ACGCCACGTGACCGCGGCCGCCCCGCCAGCT---CCGGCGCGG-TTCGGGTGCGGTTGCTGGCGGCTGCGCTGTG ...:.....x..----..x.x...:..x..xx..x..---....:.----:.:..x:x....x:..:.:..--........:x..x.x........x::xx.x....---.....:x...x.x.---------------:::.:.....:..-.:x...:.--...x.::.x.:.:--..x.:...x.:.xxx.:....x.:..x.:..x..x.:.--------....:--..x......--------------x:...............:........x..................x.:..:..x.x............:..:.....:.....x.....xx:.x.:x.x.x::x.:.x.x.x.x.xx.x...x:x..x..x.x..-----:...:..x.x.....---.x..:....----.......x::.x..x..---x....x...x:x....xx.....x.:.:...---......x..-:x....x...--:..x...x..:..xx..:. 12M4I21M3D6M4D21M2D34M3I14M15D13M1D8M2D13M2D38M8I5M2I9M14I135M5D15M3I9M4D17M3D31M3D9M1D10M2I19M 305/439 69.5% 475/94230402 0.0% 81/439 18.5% 1023034 NA +7521 chr4 + 190214555 15707484 15707483 15707653 170 TTTGATGTTTTGTTTGTCTTTCC---TTAGTCCCTGTTCTGGGAAAATAGCCACCTCCTTGTTAACAGCTTTGCAGACAACACCCGTCGTTTTATGCCCCTGAGCGATGTTCTGTATGGCAGGGTTGCAGATTTCTTGAGCTGGTGTCGACAGAAAAATGACTCTGGTAAGAC chr4 - 94230402 14641267 14641266 14641439 79588964 79588963 79589136 173 TTCTGTATTTTGTTTTCCTTTTTAATTTAGTCTCTCTTCTGGGAAAATAATCAGCTGCTAGTCAACAGCTTTTCTAGCAGAGCTCGTCGCTACATGGCTCTTGGTGATACTCTGTTTGGCTTCTTTGGAGATTTTCTAAACTGGTGTGGGCAGGAAAATAGCACTGGTAAGAC ..:x:.:........x:....::---......:..x.............::..x..x..x..:.........x.x::..:x:.:.....:.x:...x.:..x:.:...::.....x....xxxx...x......::.:.:.......x.:...:.....::.x.......... 23M3I147M 120/170 70.6% 173/94230402 0.0% 3/170 1.8% 1066217 NA +4319 chr4 + 190214555 15711764 15711763 15711885 122 GATAATCTTTGGAATAAAATGTGTTTGTCTACTTACCCCTTAGGACTCGATTACCAATCCTGCCCTACATCAGAAGACTGTGAAAATAATCCTGTGGATTCCTTTTGGAAAAGGGCATCCAT chr4 - 94230402 14641824 14641823 14641943 79588460 79588459 79588579 120 GATCATCTCTTTAACAGTACGTATC-ACATGCTT-CCCAACAGGACTGGACTATGAATCCTGCCCTACTGCAGCAGAATGTGAAAACAATGCAGTGGATGCTTTCTGGAGGATGGCTTCAAT ...x....:.xx..:.:x.:..:.:-::x.:...-...xx:......x..:..:x.............xx...x...x........:...x.x......x.:..:....::.x...x..x.. 25M1D8M1D87M 84/120 70.0% 120/94230402 0.0% 2/120 1.7% 1069940 NA +4800 chr4 + 190214555 15715262 15715261 15715368 107 AAAATACTTGGTTCT-TCTCGTAGTATTCCAAGGATAGTTCTGGGGTGATCCACGTCATGCTGAATGGTTCAGAGCCAACAGGAGCCTATCCCATCAAAGGGTAAGAA chr4 - 94230402 14642492 14642491 14642599 79587804 79587803 79587911 108 AAAATGTTCTGCTATGTATTGCAGTATGCACAACACAGTTCTGGGGTGATACACGTCTTGTTGAATGGTTCTGCAGAAGGAGGAGCATATCCAGTCAAAGGGTAAGAA .....::.:x.:.x.-.x.:.:.....x.xx.:x.:..............x......x..:..........x.x:xx.:x......x.....x:.............. 15M1I92M 79/107 73.8% 108/94230402 0.0% 1/107 0.9% 1072770 NA +6895 chr4 + 190214555 15715691 15715690 15715808 118 AAGAAATGTTTCTCA-----GTTTTTTTGCAGATTATGAAATTCCAAACCTCCAGAAGGAAAAAATTACACGAATCGAGATCTGGGTTATGCATGAAATTGGGGGACCCAATGTGTAAGTTAT chr4 - 94230402 14643985 14643984 14644107 79586296 79586295 79586418 123 AAAAAATGTTTCTCAAATCAGTTTTTTTGCAGATTATGAAATACCTCATCTCCAGAGAGACAAGATCTCACAAATAGACATCTGGGTTGTGGATGATATTGAAGGACCAAATATGTAAGTTGT ..:............-----......................x..xx.:.......::..x..:..:x...:...x..x.........:..x....x....::.....x...:........:. 15M5I103M 96/118 81.4% 123/94230402 0.0% 5/118 4.2% 1071706 NA +3327 chr4 + 190214555 15718228 15718227 15718296 69 AAAATAATGGCAGAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATACACACACACACAGAGAC chr4 - 94230402 25393240 25393239 25393308 68837095 68837094 68837163 69 AAATTAAGTTCTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x...xxx.x..x..:x:......::.....:...:...:.:.....:.............:x.x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -9675012 -84555390 +3048 chr4 + 190214555 15720825 15720824 15720863 39 CCTCAAAAACAAACAAACAAACAACAACAACAAAAAGCT chr4 - 94230402 20088787 20088786 20088825 74141578 74141577 74141616 39 CTCCAAAAACAAACAAACAAACAAGAACAATAAAAAGCT .::.....................x.....:........ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -4367962 -89862440 +3075 chr4 + 190214555 15720828 15720827 15720860 33 CAAAAACAAACAAACAAACAACAACAACAAAAA chr4 - 94230402 35083944 35083943 35083976 59146427 59146426 59146459 33 CAAAAACAAACAAACAAACAACAACAACAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -19363116 -74867286 +3091 chr4 + 190214555 15720828 15720827 15720864 37 CAAAAACAAACAAACAAACAACAACAACAAAAAGCTC chr4 - 94230402 68691702 68691701 68691738 25538665 25538664 25538701 37 CAAAAGCAAACAAACAAACAACAACAACAAAAAACCC .....:...........................:.:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -52970874 -41259528 +3635 chr4 + 190214555 15728521 15728520 15728600 80 TGGCATATTGT-----AACCTCAACCTCCTGGGTTCAAGTGATCCTCCTGCCTCATCCTTTCAAGTGGCTGAGACTACAGGAGCA chr4 - 94230402 18197114 18197113 18197198 76033205 76033204 76033289 85 TGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ......xx...-----.:..:x..x..:.............x.:.x.xx.x....x..........:....::......x.x... 11M5I69M 61/80 76.2% 85/94230402 0.0% 5/80 6.2% -2468593 -91761809 +3346 chr4 + 190214555 15750239 15750238 15750317 79 AGTCTCAAACTCCTGACCTCAGGTGATTCACCAGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTG chr4 - 94230402 18197130 18197129 18197206 76033197 76033196 76033273 77 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:x..:..:...:x:...:...x.....x:.x........:....:xx.....:.:....--x...x:........ 63M2D14M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% -2446891 -91783511 +3178 chr4 + 190214555 15762170 15762169 15762452 283 CGGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGAA--AGAACTTAATTCAAAAC-----------------CATGCATACATATGTGTGTGTA---TGTA-------------------TGTATACAACTTTCTTTTATACACACACACCCATATATACATATATGTATACACACACACATAAGTAGAAAGGTAAGTAAAAACATAATTTTCTCTAGGTAGTATGATTATGGGTGTTTTTCATAAGCTTATTTGTAATTGTTTATATTTTATTACATTTAAAGTTCATTTCATTTA--AAAATATTTA chr4 - 94230402 49039890 49039889 49040193 45190210 45190209 45190513 304 CAGAGTGAAA-------TCTAAGGACAAATAACCAAATAAATCCGGAATAGAATCAGTACATTACTCAAAATTAAACCAGTAACAGAGACATCTACATTTATCTGTTTGTACCTTGTAGCTCATTCTCTGAATTTTCTCTATAAAACATTATTTTTTCAGCAGTTACTGATATATACATATATCTATGCACACACATTCAAATCATAGGGTATAT-AATGCATCTGTTCTTCTACACAGGGTAATCA-AAATTCTTTTCAAAA---TATGTG-------TTATATCCTAATA---TGAGTATCCATCTCAATTGTTAAATTATTCA .:......:.-------..x..::.x...x..xx...x...xxx::.......--..x..x.x.:......:-----------------...x:.:.:x...x...x....---....-------------------.x....x...x..x....x.xx:..xx:..:x..............x...:........:x:..:.x:x.:....x:.-..x:...xxx..::....x::..x:.:..:.-:::.x:......x..---...x..-------......::..x..---.x.:x:.:...:...x..:--...x....:. 10M7D36M2I17M17I22M3I4M19I78M1D31M1D15M3D6M7D13M3D19M2I10M 175/261 67.0% 304/94230402 0.0% 65/261 24.9% -33277720 -60952682 +3546 chr4 + 190214555 15762183 15762182 15762274 92 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGAAAGAACTTAATTCAAAACCATGCATACATATGTGTGTGTATGTATGTATACAA chr4 - 94230402 86407063 86407062 86407140 7823263 7823262 7823340 78 CACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTT--------------CACAAATATATGTGTATATATATGTATGTAA ..::.....:x..............:..x...:...xxx....x...--------------..:.x....:.....:...:.......::.. 47M14D31M 60/78 76.9% 78/94230402 0.0% 14/78 17.9% -70644880 -23585522 +6323 chr4 + 190214555 15816442 15816441 15816651 210 AATAATTATGCTCCAAAAATATTTT----TAAAATCAAATAATTTATGTTTTATTTTCTGTGTTTTATCTCAGACATGTAGACTGCCAAAGTGTATGGGATGCTTTCAAGGGTGCATTTATTTCAAAACATCCTTGCAACATTACTGAAGAAGACTATCAGCCACTAATGAAGTTGGGAACTCAGACCGTACCTTGCAACAAGGTAATTGGGGG chr4 - 94230402 14677702 14677701 14677903 79552500 79552499 79552701 202 aataattat----taaagatatttaataataaatataaattaatGATGATTCAATCTGTCTG--------CAGAGATAAGGATTGCCTTAAAATATGGGAATCGTTAAAAGCTGCATTCGTTCACAAGAATCCCTGTAATGCTACAACAGAAGATTATCGGCCTTTAATGGAGTTGACAAGTCATCCAGTACCCTGCAACAAGGTAACAGCGGG .........----:...:......x----....xx:....x.x.x...x..:.x.:.x.x..--------....x..:x:..:....xx.:x:.......xx.x..x..:.x......::..:xx..:x....:..:..:::...x:x......:....:...x:.....:.....:x..x...xx.x.....:.............:x.x... 9M4D12M4I33M8D144M 137/198 69.2% 202/94230402 0.0% 16/198 8.1% 1138740 NA +3645 chr4 + 190214555 15824860 15824859 15825002 143 ATTGTATTTATTCTTCCTTAGATTCTTCTTTGGAGCAGAATAAAAGATCTGGCCCATCAGTTCACACAGGTCCAGCGGGACATGTTCACCCTGGAGGACACGCTGCTAGGCTACCTTGCTGATGACCTCACATGGTGTGGTGA chr4 - 94230402 14678437 14678436 14678577 79551826 79551825 79551966 141 ATTGTACCT--TATTTCACAGTCACTGTTTTGGAGCAGGACGTATGACCTCGTTCATCTTTATTCAAAATGCAATCATCATTTCCTTACCTTGGAGGACACGTTCCTGGGTTATATGCTTGATGGGCTTTCATGGTGTGGAGA ......::.--.x..:.x:..x:x..x:..........:.::x.x..:..x.::....xx.x:x..x.:xx.x.x.:xx.:x.x:.:...:...........:.x..:..:..:x.xx:.....:x..:x..........x.. 9M2D132M 87/141 61.7% 141/94230402 0.0% 2/141 1.4% 1146423 NA +4366 chr4 + 190214555 15838076 15838075 15838171 96 CATTTTTTTTTTTAAGTTTGCAGAAGCTGCCTGTGATGTGGTCCATGTGATGCTCAATGGATC--CCGCAGTAAAATCTTTGACAA-AAACAGGTACAC chr4 - 94230402 14680501 14680500 14680599 79549804 79549803 79549902 99 CATTTGTTTTGGTCAGTTTGCAGAAGCAGCATGCGGTGTGGTTCATGTGATGCTCAATGGGTCAATAGAAGCGGGAGCTTTCAGAACGAGCAGGTATAC .....x....xx.x.............x..x..:.:......:.................:..--:x.x..::::.x....x.x..-:.:......:.. 63M2I21M1I12M 73/96 76.0% 99/94230402 0.0% 3/96 3.1% 1157575 NA +3017 chr4 + 190214555 15862761 15862760 15862826 66 TTGGCTGTAAGCTTTTTTGTGCTTCACTTTTCTCATCTGTAAAATGGGAATTACAGCAGTAACTTC chr4 - 94230402 7135890 7135889 7135955 87094448 87094447 87094513 66 TTGGCTTCTAACCTTCCTGTGCTTTAATTTCCTCAACTGTAAAACAGAAAGGACAGCACAGACCTC ......x:x.:.:..::.......:.x...:....x........::.:..xx......xx:..:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 8726871 NA +4673 chr4 + 190214555 15864979 15864978 15865051 73 ATTCAAATCCTTAAAGTATTAATTATAGTCAAGGACATATCCTACAACAAATTGGTCTGGAATTTCACATCCA chr4 - 94230402 90185583 90185582 90185655 4044748 4044747 4044820 73 ATTCAAATCTCTGAAGTATTCATTGTAATCGAGGGCGTATCCAACAACAAATTTGTCTGGCACTTCAAATCCA .........::.:.......x...:..:..:...:.:.....x..........x......x.:....x..... 73M 59/73 80.8% 73/94230402 0.0% 0/73 0.0% -74320604 -19909798 +4101 chr4 + 190214555 15865092 15865091 15865178 87 ATCTGGCAATGTTGATCATCTTTGGATTATACTGCTTGGTCAAGGAAGGCCAGGTTTGCATTGTTTTGTCAGGGTAAATTGTATCTT chr4 - 94230402 90188816 90188815 90188902 4041501 4041500 4041587 87 ACCTGGCCACTTTCACCATCTTTGGATTGTACTGCTTAAGTAGAGACAGCAACGTTTTCATTGTTTTCCCAGTATCAATTATATCCT .:.....x.:x..x.:............:........::x:.::..x:..x.x....x.........x:...x:.x....:....:. 87M 62/87 71.3% 87/94230402 0.0% 0/87 0.0% -74323724 -19906678 +4060 chr4 + 190214555 15875424 15875423 15875493 70 CTCCTGGGTCCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGAGACTACAGGTGTGCACCACTATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:......:....:.x...x..x.x........::..........::......--:..........:.. 54M2D14M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% -2321715 -91908687 +3102 chr4 + 190214555 15885062 15885061 15885097 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -65744002 -28486400 +3270 chr4 + 190214555 15885062 15885061 15885101 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................:x.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -3097253 -91133149 +3216 chr4 + 190214555 15885064 15885063 15885098 35 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:........................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -65744000 -28486402 +3342 chr4 + 190214555 15885064 15885063 15885103 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...................................x::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -3097251 -91133151 +3128 chr4 + 190214555 15885066 15885065 15885105 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x................x..::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -3097249 -91133153 +3076 chr4 + 190214555 15892284 15892283 15892345 62 GGTCTAGAAAAGTTAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACAC chr4 - 94230402 70707573 70707572 70707634 23522769 23522768 23522830 62 GGGTTGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ..x:.::.:..:x:.:.....x.::....x:x.................:........::.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -54815289 -39415113 +3257 chr4 + 190214555 15892288 15892287 15892346 59 TAGAAAAGTTA-AAAAAAAAAAAAAATATATATATATATATATATATACACACACACACA chr4 - 94230402 60979341 60979340 60979400 33251003 33251002 33251062 60 TAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ..:....:.x.-.....x...x....xx.x........:.:................... 11M1I48M 49/59 83.1% 60/94230402 0.0% 1/59 1.7% -45087053 -49143349 +3020 chr4 + 190214555 15892289 15892288 15892343 55 AGAAAAGTTAAAAAAAAAAAAAAATATATATATATATATATATATACACACACAC chr4 - 94230402 70707580 70707579 70707634 23522769 23522768 23522823 55 AGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ......xxx.....x.::....::x.................:.:......::.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -54815291 -39415111 +3111 chr4 + 190214555 15892292 15892291 15892359 68 AAAGTTAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACATATATATACATAT chr4 - 94230402 64433195 64433194 64433262 29797141 29797140 29797208 68 AACGTAGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTAT ..x..x:.....:x.....xx.x.x.:.:.:.........x......:......::...::..::... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -48540903 -45689499 +3055 chr4 + 190214555 15892322 15892321 15892384 63 ATATATATATATACACACACACACATATATATACATATATATACACACATATATATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x.....x.:.......:..:.:x..::x.:..:.x...:..::......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -1628427 -92601975 +3486 chr4 + 190214555 15892343 15892342 15892415 73 CACATATATATACATATATATACACACATATATATATATATATATATGTGTGTATATATATATGAATATCTGT chr4 - 94230402 71630131 71630130 71630203 22600200 22600199 22600272 73 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGT ...x..::.::.:::.....:.......x.....:....x.x.:....::...:.x.::..:.......x... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -55737788 -38492614 +3986 chr4 + 190214555 15900504 15900503 15900630 127 GATTCAATAACATACTAAAT-CTTAGTTTGCCTGGTTGCTGGTTGCTTCCTTCTTTTTTCTCTTTTTCTCTTTCTTTTTCTTTTTTTTTTTTTTTTTTTAGACAGGATTTTCTTCTGTGGCCCAGGCT chr4 - 94230402 50770914 50770913 50771039 43459364 43459363 43459489 126 GATTCCATAAGTTTCCAAATTCTTATGTTACTTATTAACTGGTGATTCACTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT--ACCATATTTCCTTTATTTGTCCAGATT .....x....xx.x.:....-....xx..:.:.:x.x:.....x::.:x..x...:.:.....:.:....xx...x...:.x...x.............--..x:x....:...:xx.x.:....::. 20M1I78M2D27M 85/125 68.0% 126/94230402 0.0% 3/125 2.4% -34870410 -59359992 +3703 chr4 + 190214555 15923347 15923346 15923427 81 TGTGTGTGTGTGTGTGTGTGTATATATATTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTAGAGACATGGTTT chr4 - 94230402 15882773 15882772 15882846 78347557 78347556 78347630 74 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTT-------CATGGTTT ..x..............:.:.....:..x..xxx...x..x...x:..........xx........-------........ 66M7D8M 60/74 81.1% 74/94230402 0.0% 7/74 9.5% 40574 NA +3088 chr4 + 190214555 15923351 15923350 15923406 56 TGTGTGTGTGTGTGTGTATATATATTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT chr4 - 94230402 15882773 15882772 15882828 78347575 78347574 78347630 56 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTT ..x......................x.x:..xxx...x..x...x:.......... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 40578 NA +3098 chr4 + 190214555 15932668 15932667 15932732 65 ACTCCGTCTCAAAAAAAAAAGAGGAAAAGAAAAAGAAAAAAGGTAAAAAAAGAAAGTCAATGTAA chr4 - 94230402 92973718 92973717 92973782 1256621 1256620 1256685 65 ACTCTATATAAGAAAAAAGGGAGGAAAAAAAAAAGTATAAAGGTGGAAAACTAAGATGAATTTAA ....::.x.x.:......::........:......x.x......::....xx..::.x...x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -77041050 -17189352 +3656 chr4 + 190214555 15964560 15964559 15964626 67 CTGTAGCCTCCAACTCCTGGGCTCAATTACTTCTCCTGCCTCAGCCTCTCAAGTAACTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..::....:xx.:..:.....:....x.:....x.xx.x........:.......:....:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -2232566 -91997836 +19828 chr4 + 190214555 15979284 15979283 15980604 1321 CATACAGAGAGAAGTGAAGGCATCA----GCAGCATGCAGAAAATTC-AGTGCTGATC--TATAGGAGATGAGACGGTTTATCATAGGGCGGGCATGCACTTCCAGACTTTGCTTTACCTTGTCATAACAGGATTGTGAATACCATATACATGATCTTTATGATAACCATTATTACCATTTTCCATACTGTAACAGAAATAAATACACCAA--AAACACCATGTTATCTCTAAGATGAAGTATTTACATCATGGATTACAAAGACAATGTAATGGTCATGAAAAGTATGTAACAATTTGTTAAATCTAAAAAAAAGACAAATG----------AGTAATTGACATTTTGCTCCTTTTAAACTTCAAAGACCAAAGGACTACTTTATAGATTAATAAACTTAACAT---ATAAAATTTCATTAATTCATCAAGTATTTCTTGAGCACCCTCTATGTGCCAACCCTCTTTTTAAGACCATTGCAATTTATTTTTGCCTGTACAGA-TCTGCTGTTTCTACATAATTTTAAGATGTTAATAACTTAATTTTTAAAGTCCATTACATAATAATATCAACCTCCCCCATCCCATCTAGGAATATAGTTTTTTTA--------------AAAAGGCTTACTTTTTCATGGGTATAGTTTCAACACTATAAAATACAAAAAAGGGAGATAAAATTAATTTTTTTAATTATTATGAAAGCTCAGCAACTACATCCCCCAAATATTTACTCTAACACGGATACTGACAGTGCAAACTCAGGAAAGACCCATGTTGAAAGATAAGTGAAGTGAAA-------AACAAGGCATACACATTCACCAGACA-----CAGAATGAGGGGCAGACTA---CAGAGCCAAAATGGAAA------------GTGTAAAAACAGTTATCATAAAGTGAAATGCCAGGTCCCCGAGAGAGAGGAACTGCAAACAAGAAATAAAAAGGCTGGTTAGGGA-AGCTGAGAGGATTAAGCAAGAGGAAAAAAGTAGTTAAAACAAGTATAGAAAAATCAGTACCAAGAAAAAAAAATTCACCTGAACAGAAGTGACCCAAC---------------------------TACTACTAAAAAA----------AAAAAAAAAAAGA---------AATCAACTTTAACCTCATCAGAACT-----CATCTTTAGC---------------------------------------AACTCTTTGAAG-------------------------------------------------ACAGCAC----------------CACCT--------------AGAAAA-----TGACCCCCACGT----------CTGTGGAAGCCCACATACTTACTCATCGTACACGTCCTCCGAATCCATTCGACGATAGTACTTAGCCAGTTTTACCGCAAAAATTAGAGCCGGAAGTAAAAATACAGTAGCTTTTCCTATGCCAAAC-----------------CAAAACAAATTCTAGGAAAAAAAAATCAGAAGAATTAAATGTTTGAAGATAAGAAATGGGAAAAACAGTTGTTTGGGG chr4 - 94230402 14728804 14728803 14730241 79500162 79500161 79501599 1438 CATAAATAGAGAACTAAGTGATTCACTTGAAAACATGCAGAAAATTGGAGAGGTGATTAATACAGTAGATTAGGCAAGGACACATGGAG---ACATGCAGTTTCAGACTTGG-TTTACCTTGTAATAACAGGATTGTGTATACCATATAAATGCTCTTTATGATAACCATTATTACCATTTTCCATACTGTAATA-AAATAAATACACCAAGAAAAAAACATGTTAACTATAAGATGCACCACGTATAGTATGGCTTCCAA-GACATGTAAATGG--ATGA------TGGTATTATTTGC------------AAAGGTAAACTGTTTCTGTACAATAAAAGATATCTT-TTCTTTTGTAACATTCAGGAGTGAGGGAATAACT---------ATAATCTTAATATTCTCCAAAA----ATTGATTATTAAGATATTTCCATAG--------ACTTGGATACTCTAATGTAAAGTCAGGTGAAA----------------CAGAGTATGTTACATCTG------TTGAAG----TAACAAGTTAA-----------------ATGAAAAATCTAAGCCCTCCCACCT-------GAATAAAGTAATTTTACCAAATACCAACAAAAATGTCTTACTTTTCCAAGGGTATAGTTTCGACACTAAAAAACACAAAAAAGGAGTAGTTAACTGGACAACAAAATAAGTAAGTAATTTTAGCTG-TACCTGCCC---GTTTCTGCTCTACT--GACTTCTGAATGTGAAA-------------------TGAAAAATGAGCAGTGTGAAACTGGAGGAATGCAGTGCACAGGCTAACTGAACAACAAGCAAAACAAAGAGCAGAAAAGAAAAGAGTAAAAATGAAACTGATCGGAAAATATGTAAGAACAGTTATCATAAAGTAAAATGCCAAGTCCCTGAGACAGAGGAACTGCAAGTGAAAAA-GGAAAGACTAGTTAGGAATAACTAAGGCAGT-------AAGGAAGTAAATAGTTAATTCAAG------------ATTACAAAGGAAGCGTAATTCACCTTAAAAG--GTAACTTAGCGAAACTAATCATCTCTACCCTAGCAGATATTTATATAAAAGGCTGCACATAAAGCTATGAAGACTCATTCTGAAGTAAGTTTCTCATAGTCAGAACTGGCACTATCTACAGAGTCATGACAAGCTGAGTTCATCAAAGCCTGCCTGCATGAAGCACTTTGCAGGGACCAACCCAAACCTATGCTATTTCACAAGCACATGCAGTTCTATCTGACAGCACGGATTAAGGATTATAGCACCTTCATGTGAAACACCAGAAAACATATTTAAGCCCATGTGCCATTTAGCTTGCTTAGAAGCATATACTTACTCATCATACACATCCTCTGTATCCATTCTACGATAGTATTTGGAGAGTTTCACAGCAAAAATTATGGCAGGAATTAAAAATATTGAGGAGCCTCCCAAACCAAACCAGAAGGTATTCTGAAACAAAACAAAATCCAAGATAAAAAGATCACAGAGAATGGTTACTCAGAGA----ACATGGGAGAAATTATTGCCATGGG ....x.x......x.:.:x.xx...----:x.:.............x-..x.x....:--..:..x....x..:.::xxxxx...:.:.---:......x..:.......x.-..........x..............x..........x...x.......................................:.-...............--...x.x.......x..x.......x.x:.:x..:.x:....x..x...-....xxxx.....--....------..xx.:x.....:------------....::...:x----------.:...xx..:..:..-:..:...xx...x.:x.:..x::.:...x..x:.---------....x.....:..---x:....----...:...xx.x.::......:xx..--------.:x..xxx..:..xx.x.x...x.x:x..x..----------------....-.x..:.::x...:------..x...----...:..x....-----------------..:.x..xx::..x.:.:....:.:-------.....x...xx.....--------------...x.x.........:..x............:......x....:..........::x.xxx..:.::x:xx:xx...x.x..x.x..x:.:...x:-...x.x...---:.x.:.:.....x:--.:x.x....xx...x..-------------------.....:..:..:::x......-------..::x:.:::...x::.x..:::...-----..:..::.:.:.....xx.---x....:x......:..x------------:.....:.................:........:.....:....x.............:::.:...-::....:..:......:.-.:..:..:x::.-------:.....:x..:.......xx....------------.x...x...:..:x:x.........x..x..--..:..::.:.---------------------------..:.xx..x....----------...:xx.x:....---------..x:..x...xx.x.x:........-----:....x:..x---------------------------------------.:.x.....x..-------------------------------------------------.......----------------.....--------------......-----.x.xx....:..----------:..:xx.::xx..:.............:.....:.....:.x........x.........:..:.xx.....:..x..........x:..x....x........:x.x:.xx::...:.x:......-----------------.........x..:.:..x.....:....x.:::.x.::x.::.:::...----.x......:...:x:...::xx... 25M4I18M1I10M2I29M3D20M1D82M1D15M2I48M1D13M2D4M6D13M12D11M10I15M1D34M9D13M3I6M4D25M8D32M16D4M1I13M6D6M4D11M17D25M7D16M14I96M1D9M3D14M2D17M19D21M7I26M5I19M3I17M12I66M1D18M1I12M7D24M12D31M2D10M27I13M10I13M9I25M5I10M39I12M49I7M16I5M14I6M5I12M10I127M17I49M4D25M 829/1172 70.7% 1438/94230402 0.0% 415/1172 35.4% 1250480 NA +3684 chr4 + 190214555 15995362 15995361 15995435 74 GGAGGAAAAGAAGAAGAAAAAGAAGAAAAAGGAGGAGGAGGAGGAGAAG----AAGAGGAGGAGGAAGAGGAAGAAGA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ..:.:....:.....:....:...:..........:..:..:..:.::.----......x.:.::.::x......::. 49M4I25M 53/74 71.6% 78/94230402 0.0% 4/74 5.4% -24477180 -69753222 +6504 chr4 + 190214555 15998381 15998380 15998498 118 ATACCTGTAAACTTGTTCAAAAGTGAGCTTCATTTTTGATTTATTAAATAGCTTCCCAGAGAGATAGTATTCCCAGTCTTCATTTAGTAAGTAGGGTGTATCCAAAACCTAGAACACA chr4 - 94230402 14739938 14739937 14740055 79490348 79490347 79490465 118 ATACCTGTATACTTTTTCAAAAGTCAAGTTAATATTTGGATTTTTAAAAAGAATGCCAGAAAGATAGTTTTTCCAATGCTGATTTAGTAAGTAGGGAGTATCCAAAACCTAGGAGACA .........x....x.........x.:x..x..x....:x..x.....x..xx.x.....:.......x..:...:.x:.x...............x...............:.x... 118M 94/118 79.7% 118/94230402 0.0% 0/118 0.0% 1258443 NA +6858 chr4 + 190214555 16000454 16000453 16000630 177 TCTGTTCAAGTCCTTTCATAATGGGTAGAAAATCATATTTACCCGGAATAATTCCTTGCTCGTGTAAGGTTCACAGATCAGTTTTTCCACATTTGCACCAAAGACAAAGGTAAGAACCACAATGATCATCAATATCCAGCAAAAGAGGAAACTTAATCCAACTCCACTGGAAAAAAA chr4 - 94230402 14740435 14740434 14740609 79489794 79489793 79489968 175 TCTATTCA--TTGTTCAATAATCTGAATATGAGTAACTTCACCTTGAATAAAGTTTTATCTTCAAAGGGCTCACAAACCAGTTTTTCTATATTTCCACCTGTGACAAATGTAAGCACCACTACAATCATCAGCACCCAGGAGAAAAGAAAACTGAATCCAACGCCACTGAAAAAGAA ...:....--.:x..:x.....xx.x.x.x:.x:.xx..:...:x......xx::..::::x::x.:..:.....:.:.........:.:....x....x:x......x.....x.....x.::.......::.:....x.:..:..:.....x........x......:....:.. 8M2D167M 119/175 68.0% 175/94230402 0.0% 2/175 1.1% 1260019 NA +3245 chr4 + 190214555 16004862 16004861 16004933 72 TCTCTCTCTCCCTCTCTCTCTCTCTCCCTCCCCCTCTCTCTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTC chr4 - 94230402 23891375 23891374 23891446 70338957 70338956 70339028 72 TCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTC ..x.....:..x:.:.x.:x:.:.:...x.....:....:.....::..x..:...:...::..:.::.:.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -7886513 -86343889 +3030 chr4 + 190214555 16004951 16004950 16004986 36 TTCTCGCTCTCTCTTTTTTTTTTTTTTTTTTGACAG chr4 - 94230402 50117657 50117656 50117692 44112711 44112710 44112746 36 TTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAG .....x..........................:... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -34112706 -60117696 +3044 chr4 + 190214555 16006316 16006315 16006349 34 TTGTTGTTGTTGTTGTTTGTTTGTTTTTAATGTT chr4 - 94230402 72014477 72014476 72014510 22215893 22215892 22215926 34 TTGTTGTTGTTGTTGTTTGTTTGTTTTTAATGCT ................................:. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -56008161 -38222241 +3185 chr4 + 190214555 16022116 16022115 16022194 79 AGGGAAGA------AGGGAAGGAGGGAAAGAAAGAAAGGGAGGGAGGGAGGGAGGAAGGAAAGAAAGAAGGAATGGAGAAGCCAC chr4 - 94230402 35636882 35636881 35636966 58593437 58593436 58593521 85 AGGGAAGATCTTAAAGGGAATGGGGGAAAAAAAAAAAGGGAGATGAGGGGAATGGGATGAGAAAGTGTGGGAAAAGAAAAGTTAC ........------......x.:......:...:........:x::..:.::x..:.x..:.:.:x.x:....x:..:...::.. 8M6I71M 54/79 68.4% 85/94230402 0.0% 6/79 7.6% -19614766 -74615636 +4439 chr4 + 190214555 16024288 16024287 16024370 83 TACTCACTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTGGGCCAATATATATTTGATTTGCTGAAAAAAGAA chr4 - 94230402 14750351 14750350 14750433 79479970 79479969 79480052 83 TACTTACTATTTAGGTCAGAGAGTGCTTTATCCTTGGTTGTGTTGTACTGGCTCACCAAGTAGTCAATTTGCTGGAAAAAAAA ....:...:..:..:..x.x..::..:..:........x............x:..x:.x:..x.::........:.....:.. 83M 61/83 73.5% 83/94230402 0.0% 0/83 0.0% 1273937 NA +3027 chr4 + 190214555 16025683 16025682 16025732 50 GTGTGAACATATGCATGTGTGTGAACACACACACACGCACACACACACAC chr4 - 94230402 14964835 14964834 14964884 79265519 79265518 79265568 50 GTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x...::..:....:.:.:x.xx........:.............. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 1060848 NA +11580 chr4 + 190214555 16033283 16033282 16033540 258 GTTGTCCAATATTGTACTTGCCTTATTATTATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCACCACATTTGTTACAGCAACGACACATACAAAAGAAATACCCCACCAGAGGCATCAGAATAATAAACAGCAGCCCCAGGACACAGCATAGAATAATCCCTGCTTCATAGTAGACAATCTGCAATTCAAACAAAA------GAAACAGCACATAT chr4 - 94230402 14758353 14758352 14758614 79471789 79471788 79472050 262 GTTGTTC--TATTACACTTGCCTTATTATTAAAGAAGCAACAAAAAGAAATGTTGCAAAACAGCTCCTCTGACAGTCAGCATTTTTCTTCTGTCTTTGATGCATTTCCCCACCACAGTTGTCACAGCAACGACACATACAGAAGCAAAGTCCCACAAGAGGCAGTAACAAAATAAATAGCAATCCCAAGGCTGCGGAGACTATAAAACCGATCTCATAGTAGATGGCCTGCAATTCAGACAAAAATAGTGGTAATAGCAGGTAT .....:.--....::................x.x..::x..x..x..::.x:.......:..x:.....x.:x..xxxx......:........x:..:........:........x....:..................:...x..x::.....x.......x:.:x.x......:....::....:.:.xxx.x.x.xx....xx..x:::..........::::..........:......------.x..:....x:... 7M2D235M6I14M 187/256 73.0% 262/94230402 0.0% 8/256 3.1% 1274930 NA +3439 chr4 + 190214555 16051316 16051315 16051397 82 GCCCTGCTATTTAATGGCTGTGTGGCCTTGGGCAGGTGGCTTAGCCACTCTGTGCCTTCGTTTCCTCTTCTATAAATGTTAT chr4 - 94230402 60684674 60684673 60684755 33545648 33545647 33545729 82 GCCCCACTGCAGACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAAGGTTGT ....::..::xx.x.xx.....::.:..x:....:...::x.x:..x.........::.:.......:...:....x...:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -44633358 -49597044 +3363 chr4 + 190214555 16052552 16052551 16052629 78 CTGCAGCCTTAACCTCCCTGGGCTCAGGTGATCCTCCCACCTCAGTCTCCTGAGTAGCTGGGACTACAGGTGCACAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTC-TGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.....:x..x..:.-....:...:...x.:.x.xx:x.....:..::::.........:......x......x.. 17M1D60M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% -2144574 -92085828 +3068 chr4 + 190214555 16112589 16112588 16112649 61 GAAAATGGGGAAGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAG chr4 - 94230402 92619642 92619641 92619702 1610701 1610700 1610761 61 GGGAATAGGGACGGGATGGGGACGGAGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGAG .::...:....x.:::x::...x...:....x.:::.......x..::............. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -76507053 -17723349 +3261 chr4 + 190214555 16112653 16112652 16112707 55 AGGGTGGAGGGGAGGGTGGAGGAGAGGGGAGGAGGGAGGGGAGGAGGGAGGGGAG chr4 - 94230402 92619648 92619647 92619702 1610701 1610700 1610755 55 AGGGACGGGATGGGGACGGAGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGAG ....xx.:.:x.:..::.....::.x.:.........x................. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -76506995 -17723407 +3800 chr4 + 190214555 16113389 16113388 16113467 79 CTGCAGCCTCAAGCCCTTGGGCTCAAGTGGTCTTCCCTCCTCAGCCTCTCAAGTAACTGGGACTACAGGAATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCAC ..:.....:x....:::....:.......x.::x.xxxx........:.......:....:......x.--........ 69M2D8M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% -2083737 -92146665 +3022 chr4 + 190214555 16131752 16131751 16131829 78 GAAATTTAAAACTGCAAGAAAGGGCAACAATCTTAAGAGCACATTTTTTTTTTTTCTTTTTCTTTTTTTTGTGACAGA chr4 - 94230402 23571781 23571780 23571858 70658545 70658544 70658622 78 GAAATTTAAAACTGGAAGAATTTGCAGGAATTTATATAGAGCATTTTTTGATTTTTTTCTCATTTTCTACATGATTGA ..............x.....xxx...:x...:.xx.x..x:........xx....:..:.:x....:.x::...:x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -7440029 -86790373 +7336 chr4 + 190214555 16161225 16161224 16161422 198 TTATTATACAGTGGGAAATTCACTCTACCAAATA--CAATAGTAAATATTAAAATAAATTCAGTGAC-------------CTTTTTAAA-AAAGATTACAAAACTGAATTTATTGAGATTCACACAAGATGCACTTATAAAATTAGTACTGAATGCCATT--AAAACAGAAGAAATGAACATAATCCCGAACTCCCAACAGCATCTGCAAAGGAAT chr4 - 94230402 14811316 14811315 14811526 79418877 79418876 79419087 211 TCACTGTACAGTAAG-----TCCTCTGCAAATTGACCAACTATGAATACTAACAAAGAAACGCTGACACTGTACTTCTCCTTTTTTAAACAAATATTACAAAATTGGATTTATTGAGTTTCACACAAGATGCACTTATAAAATTGATACAGAATGTCATTCAACAGAAAAAAAAATGAAAGCAATTCCAAGCTTCCTTTAGCAACTGCTAAGTAAT .:.:.:......::.-----:x....:.x..x.:--...:x:.:....:...x.x.:.xx.:x....-------------:........-...x.........:..:..........x..........................::...x.....:....--.x.:x.:..:.......x::...:..:.:..:..xx:....x....x...x... 15M5D14M2I31M13I9M1I70M2I54M 143/193 74.1% 211/94230402 0.0% 23/193 11.9% 1349909 NA +25580 chr4 + 190214555 16162645 16162644 16163687 1043 TTTTCCCAGTAATGCATAGCCTTCATTA-ATTATTTTTTTAATAAATAAACTAG---TTTAGCATTTTTTTTTAACCCTACAAAATGCTACTATTCATCATGTCTT--ATTTAA-GGTAGCCTTTTATTCTGATTAATTAAGATACATCTTTAAGGGTTATTCTGGTGGTAAGAACATTTATCTTGACTTA-TGTTTAATTTTTTTAATGCTTTGGCAGATGAAGTAAC------GTTTGAAAACTGTTTG--------TGAAAATAGTATGAGACTGGAAAGATTACGTCGTGGTAAAAGTTTCACAGTTTTCCAGGTATTTCCTTATACTGAAGAGGCCTTGAGGCAAATTCA-ACATTCTGGAAGCCCAGACTGACAAAGCAAAACAGATTTTGATGTTGCCTTTGT-------TGGGTCCTGGA--AATGATGCTGCTGCTTGGCCAGGCAGGAGGAAGTTTTATAATCCATCAAGCTTCCCAGACAGTCAAGGCCGGAGGTCGCTCCTGTCCTGTGGTCTGACCCTCAGCCAGGCCATATTACTGGAAGAAAGATACTAAGATTTGCTTGCCAATAATAATTTAAGTTTTTAAATAAATATTTAAGTGCCATGTTTAGCATCTATTTGTCCTGGCAACACAGCACTTGTTGCCCCAGGACCCAGCTTCTTCAGCGCAT------GAAGCCACAGATTCAGTCAATTCGGTTTCCACAAATTGTGAACCTGTCTATCTCTAACAAATCTTTCTTTGAGGATCTGTGTTTTAATTCAGAATTGTCCTGCGTTATGTCCTTCTCGTCACCATCTGGAGTTGTCAAAAACTGATCAGAATTGCTTGTCACAAGTAATGGTATGATATTTTCCTTTTGATGAATAGGTTGTTTGGTGATGGAGGCAGACAGGTTTTCTTCTGTGGAAAGGCCTGTGATAAAATAGATCCATT--AAATTAGAGAAAGACTTTTCTCCAATTATTAATAAATACAAACTTACCAAT-----------ACAGTGGTGCTGAAAAAAGTGCCCATTATCCATGCTTTCCGATAAAGCAAATGATAACCAAATAGCATGTTGTATAAG chr4 - 94230402 14812587 14812586 14813617 79416786 79416785 79417816 1031 TTTGCCCAGTTAAGCAGGACCTTCATTGTATTTTGTATTTGAGATCTTTCCTGGGTGTTTGGCATTT----------AGATAAAAT---AGTATGCAGTACATCTTTCATTTAACAGCAAATTTTCATCCTGATTAGTTCAGACACACCTTCAAAAGATTTTCTGTTGATAAGAATAACTATCCTGTCTTAATGTTTTATGTGCC-AATGCT--GAACGTTGAAATAAGCACAAGTTTTGAACTCTCTTTGCAGGTGTTTAATAAAACAAGAAAACTGGAAAGGCAAGCTTCCTGTCATGCTGTCATACACTTCCAGGAGTATCTTTACACTGGAAGAACCTTCACAAAAAGTAGTATGTTCTGGAAGCATGGTTTCATAATGCACAACAG-----GATAATGCTTTTTTCCCAGTCTATTTTCCAGACAAGTGATACTGCAGCTCTGCCAC-CAGGCTAGAGACTCATGATCCACCACATTTTCCA-AGAGGCAAGT---------------------TAACCTGACC-TGACCCAAGCCAGGATACCTGTAGAAAGAAATTAATATTT-TTTGCCattaataatttaagtttttaaataaatatttatGTGCCTTTTTGGGCAACTGTCCATTCTGGTAGCAT----CTTCTGTCCCAACAGCTCAGTATCCTCAGCACATTGATTAAAAAAAAAAAACTTAGTCAATTCTGTTTCCACAAATAGTAAACCTGTCTATCTCCAGCAAGTCTTTCTTCGAAGACCTGTGTTTTAATTCTGAACTGTCTTGGCTTATATCTTTTTCTTCTCCATCAGGAGTTGTCAGGAATTGATCAGAATTGCTTGTTACAAGTAAAGACGGCGGACTGTCTTTCTGATGCACAGGCTGATTGGTAACTGATGTAGATCCATTTTCATCTGTGGAAAACCCTGTTGGAAGAGAAGACAATTGCAAAGATAATCACGAATTTAGCACAGATAT--ACTGATGCATCTTTAACACTGAGGTTCATCCAAAGCTGTCCTGAAAAAAGTGCAATCTATCAAAG----------AAGCAGATG-TGATAGAAAAATGTTTTGTGGAAG ...x......x.x...x::........:-...x.x.x...:.x.xx.xxx..:.---...:......----------xx.:.....---.x...x..x:.::....--......-:.:.:x:...:..:.......:..x...:...:...:..::.x.x.....x..:......:.x:....:..x....-.....x..x.x::-......--.:xx.x....:...x------x......xx..x....--------.:.x..x.xx.x:.:.........::x.xx.:x:x..x.x:x.x...:.xx:.......x:.x..:...:....:.::::....x.x:x...x.x:-.::..........x::.x:.x.:..x...x.....-----...:x...:...x.-------.:xx.:.::..--.:....:....x...:x....x-....xx::..x:.:..:.....:..x::..:...-.x..x....x---------------------.:::......-.x.x...:....x:x...:x.x.......x.:...x....-:......x..............................x.....x.x..x:...x..:.:::.:....:.:..:----...x.xx...x.x::.:...:x..:.....:...------:..:xx.x.:.:.:.........x............x..:..............:.:...:........:..:..:..............x...:....:..xx....:..:..:..x..x.....x..........::..:.................:........x.:::xx:x.:.x..:..:.....x.:...:..x.....:.:x..x.:...:xx:.....x..........:x.....x:x..:.x.::x.x...--...xxx:.xx.x..x...xx:x..:x...--.:x:..:..xx:...x..x.-----------.x..:x..x.............xxx:....x.x.----------.....:...-.:.:x:..x.:::.x....:x... 28M1I25M3I10M10D9M3D17M2I6M1I76M1I13M1D6M2D15M6I16M8I96M1I35M5D14M7I11M2I22M1D34M1D10M21D10M1D40M1D74M4D34M6I263M2I29M2D20M11I34M10D9M1D24M 671/980 68.5% 1031/94230402 0.0% 114/980 11.6% 1350058 NA +9330 chr4 + 190214555 16166580 16166579 16166806 227 GATTTAACTCTTTGAAAATGATC------CAGGGAAGTGAAGAAAGGGAC---CAAACCTACCTTGAGAGGGTTTACATTTGTTCTGTGATTTACTGGACGGCTTGCCTGGAGTGCAGGTTGCGGGAGGATTCGACAGCTTCTCTTCCATTTTGGCTTCCTTCACATACTGGCACGATTTCCCCAACAGCACGATGCTATTAAGTACTTTCAGGGATATCAACCTAAAAACAGAAA chr4 - 94230402 14815846 14815845 14816078 79414325 79414324 79414557 233 GATTTAA---TTTGAAAATATTTTCATTACAGCTGAAAACAGAACGAGACATTCAAGCTTACCATGGGTAGATTTAAACATGCTTTGTGGTTTGCCAGCTGGCTTCCCTGCAGAGGCACTCGGGACAGGATTGAATAATTTCTCCTCCATTTTTGCTTCCTTTACATACTGACACGATTTCCCCAGCAATACAATACTGTTAAGGACTTTTAGGGATATTAACCTGGATAAATAAA .......---.........:x.:------...xx:.:x:x....x.:...---...:.:....x..:.x:.:....x.:x..:.:....:...:.::.x:.....x....x..x.xx:x.:.x.:x......x:.:.::.....:........x........:........:.............:..::..:..:..:.....x.....:........:.....::.x.x.x... 7M3D13M6I21M3I183M 160/224 71.4% 233/94230402 0.0% 12/224 5.4% 1350734 NA +3118 chr4 + 190214555 16166933 16166932 16167012 80 TCTTGAGTTTTCTGAGGCCTCCTTGTCACAAAGAAAAACTTCGGAATTCCTTAGTTCTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15658542 15658541 15658618 78571785 78571784 78571861 77 TCTTCAGAAATCTGA---TTTCTTTTTATAAATCAAAATTTCAGAATCCCCCACATCCTTTTCTTTTTTCTTTTTTTTTT ....x..xxx.....---:.:...x.:.:...xx....:...:....:..::.xx..::...:......:.......... 15M3D62M 55/77 71.4% 77/94230402 0.0% 3/77 3.9% 508391 NA +6194 chr4 + 190214555 16170648 16170647 16170774 127 CTTACCCAAAATAGAAGAGTATGACACAGGCATAAGACAGGATTCCTTGCACTTTAATTGAGCTTGTTACAACTCTGATGAGCTAGCC--AGAAACAAACCAAAACAACAAAAACACACA----------AACAGAACA chr4 - 94230402 14818891 14818890 14819029 79411374 79411373 79411512 139 CTTACCCACAGTAGAAGAGCACAACACAGACATAGGCTAAGACTCCTTGTACTTTTATTGAGCTTGTTACGACTCTCATGAGCTGTTTGAAGGATAAAAGTTAAACAGTTATAACACACAGCATGCAATTAACAGAACA ........x.:........:.::......:....:.x:.:..:......:.....x..............:.....x.......:x::--..:.xx...x:x.....::x.x........----------......... 88M2I30M10I9M 98/127 77.2% 139/94230402 0.0% 12/127 9.4% 1351757 NA +5895 chr4 + 190214555 16174178 16174177 16174295 118 AAAAACATTAAAAAGTATGCA-CTTACTAAAACAGCTAGTGGGAGAGGAATAAAGCCCATCCTCCGTGCTACAGAGTCACTGTAATCAGTGTATGCCTGAACAGAGAAAGAAGCAAAAG chr4 - 94230402 14820601 14820600 14820719 79409684 79409683 79409802 119 AAAACCAACAGGAAAGGTACAACTTACTAAAACAGCCAGTGGAAGAGGAATAAAACCCATCCTTCTGGAAACTGAGTCACTATAATCTGTATAAGCCTAGAAAAAGAAAAAAAAAAGAG ....x..x:.::..:x:.:..-..............:.....:...........:........:.xx.xx..x........:.....x..:..x....::.x.:.....:..:x..:.. 21M1I97M 88/118 74.6% 119/94230402 0.0% 1/118 0.8% 1353577 NA +6071 chr4 + 190214555 16174664 16174663 16174744 81 GCTCACATTTTTCTGTCGGCTGCTAACAAGGTCAAAAGCAAGACTGGCTCTATATTCACTGTAGACCTAAAAACAAACAAG chr4 - 94230402 14821739 14821738 14821819 79408584 79408583 79408664 81 GCTTACATTTTTCTGTCGACTGCTAACAAGGTCAAATGCAAGACTGGCTCTGTACTCACTGTAGACCTGGAAAAAATCCAG ...:..............:.................x..............:..:.............::...x..x.x.. 81M 71/81 87.7% 81/94230402 0.0% 0/81 0.0% 1352925 NA +10405 chr4 + 190214555 16176059 16176058 16176249 191 TTTAAAAATTAAGCAACAG--AAGTAAACTTTAAACATTGAAGTGCATATC------AAAATACATACATCTGCAGTAATGTCATTGAATTTAGTAATAAAGGCATGTTTTACAATATCCACGGCAATTTCTGATGCAATTACCATACAGACATCTGGAAACAACACCCAGAGATGATCTGTAAATAGAAAAAAGAAAA chr4 - 94230402 14823247 14823246 14823443 79406960 79406959 79407156 197 TTTTAATATAAAAAAATAGCAAAGTAAACTT--AACATAGCATTAAATATTCCAAATAGAATACCTACATCTGCTGTGATGTCATTGAATTTTGTAATAAAGGCATGTTTCACAATATCCACCGCAATTTCTGAAGCAACCACCATGCAAACATCTGGGAATAACACCCAAAGATGATCTGAAGATTGGGAAGAAATAA ...x..x..x..:x..:..--..........--.....x.x.x.:x....:------.:.....x.........x..:..............x.................:...........x...........x....::.....:..:........:..:........:..........x.:..x.::..:.:.x.. 19M2I10M2D18M6I142M 154/189 81.5% 197/94230402 0.0% 10/189 5.3% 1352812 NA +6341 chr4 + 190214555 16179573 16179572 16179673 101 TTACCTGGATTCCAAGAAAACTGTTCCATGTTTCTTAGACACACTATCAGTAAAAGCACATAATTTGTGAATCGTTCCTTAATATCT------AAAAGAAAAAAAAT chr4 - 94230402 14823933 14823932 14824039 79406364 79406363 79406470 107 TTACCTGGATTCCATGAGAACTGTTCCATATTTCTTAGACATACAATTAGTAGCAACACATAATTGGTGAACCTCTCTTTTATATCTAGTTAAAAAAAAAAAAAAAT ..............x..:...........:...........:..x..:....:x.:.........x.....:.x:..:..x......------....:......... 87M6I14M 85/101 84.2% 107/94230402 0.0% 6/101 5.9% 1355640 NA +3005 chr4 + 190214555 16179793 16179792 16179834 42 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATA chr4 - 94230402 48089505 48089504 48089546 46140857 46140856 46140898 42 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATA .:......:.:........:....x.x............... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -31909712 -62320690 +13998 chr4 + 190214555 16186528 16186527 16186947 420 TACATACCGCTATTTGACATTTGAAAGAGATTGTTCTTTTCAAACTTCTTGAAAACACTTCCTTTAATTTCAACAAACTGAAATAGT---AAACAGAAATACCATCTTTATGATTATAACAGTTTAAAAACTGGACTTGCTACTTATAAAACTTCCGGGAGAACAACATATAGAACAAAGAATTTTATCCCACCCAGAGTATTGCAGCTGAAATGCCT--GTATAACTTCAAAAATGTAAGATAAATCTCATACTTACATTATTAGACATCATGATAGTAAGCAAAGACTTGTTGTGTGAGTTAAAAGCTACATTGAGAGTTGTTGCTTGAACCATTATAAGAATTGCATGCAAAACT----AATAGAAGGTCAAGGAAAAAACTTA------AATTTGCTTTCATATTATTACTGATAATACTATAAAATTTTG chr4 - 94230402 14825211 14825210 14825614 79404789 79404788 79405192 404 TACATACCACTATTTGACATTTGAAAAAGATTGTTCTTCTCAAACTTCTTGAAAACACTTCCTTTTATTTCAACGAACTGCAATTTTTAAAAGCAGTTATTTAGTTTTTAT--TTATGAT-------AAACTGG----------TGTAAGCAAATCAGACAATCA--ATATAAAATAGACAATATGGT-ACACTAGAATGAAGGTTGCTGAAAAGATTTAGGATAGCTACACAA-------CAAAACTATATACTTACATTATTGGACATCATGATGGTAAGCAGTGATTTATTGTGAGAGTTGAAGGCCACGTTAAGGGTTGTTGCTTGAACCATTATAAGAATAGCATGCAGGACTGCAGATAACAGGGTTAAGGAAGCAGATTGGGAAATAATTTTTCTGCACAACAGCACTG--AACAGTATCAAAATTTG ........:.................:...........:..........................x........:.....x...xx.---..:...xx..x:x:.:.....--....:.:-------.......----------.:...:xxxx:.:.:x:.x..--.....:..:.:.x...x.x:.-x...:x::.xx.xx.:x.......x.x:.--.x...:..x..x..-------xx...::x:..............:...........:.......:x..:..:.....x.....:..:..:..:..:..:..........................x.......::...----.xx.x.:...:......:x.:x..:------.....x::.x..:.x:.x:....--..:.x...x...x.... 87M3I21M2D7M7D7M10D21M2D21M1D29M2I14M7D117M4I25M6I23M2D17M 289/389 74.3% 404/94230402 0.0% 46/389 11.8% 1361317 NA +11215 chr4 + 190214555 16188212 16188211 16188368 157 AAGGATACAGACATAGAGAACAGCCATGAAAAAGTGAGGAATCACCCCAATGTGGGCTCTTTTTCTTTCTTTAGGCTCTGTTGCTGTCCAATAGAGAGCATCTAATATGTCTTGTCCAAAAGATGAAAACAGACGATCAGCTACCTAAAAAAAAAAA chr4 - 94230402 14826371 14826370 14826527 79403876 79403875 79404032 157 AAGGATACAGACATACAGCACTGCCATGAAGAAGTGAGGAATCACACCTATATGGGCTCTTTTTCTTTCCTTAGGTTCTGTAGCAGTCCAATAAAGAGCATCCAAAATATCTTGTCCAAATGAAGAAAACAAACGATCAGCCACCTAAACAAAAAGA ...............x..x..x........:..............x..x..:.................:.....:.....x..x........:........:..x..:...........x..x.......:.........:.......x.....:. 157M 136/157 86.6% 157/94230402 0.0% 0/157 0.0% 1361841 NA +13142 chr4 + 190214555 16191356 16191355 16191537 182 CTTACCTCCAGCATGTTGTAGATGATGTAGAGCTTGATGACGGACTGCCCCCTTATCAGGTGGTACATCATGGAGTAGTCAACATAGTGCATCATAAAATAGCAGATTACCAAAATGACACCCTTCAAAATGTCACACACCTGGGCAGGCTGAAGCAAACGTCTGTCCCTGAAACATACAAG chr4 - 94230402 14830293 14830292 14830474 79399929 79399928 79400110 182 CTTACCTCAAGCATGTTATAGATGATGTAGAGTTTTATGACAGACTGCCCCCTTATAAGGTGATACATCATAGAGTAGTCAACATAGTGCATCATGAAGTAGCAGATGACCAATATCACTCCTTTGAGAATGTCACACACCTGAGCAGGCTGCAGCAAACGTCTATCGCTGAAATACAAAGG ........x........:..............:..x.....:..............x.....:........:.......................:..:........x.....x..x..x..:..x.:...............:........x...........:..x......:.:.x.:. 182M 157/182 86.3% 182/94230402 0.0% 0/182 0.0% 1361063 NA +11509 chr4 + 190214555 16196604 16196603 16196802 199 TAATGAATGTCAATTTGGCCAAGAGTATAGAAGGAAAAA-----TCAGGGTTTACTCACCACA-AGGAGTCCCTGTGCCACCACATTCCATTCTATAAAGGAAGTGAAAGTGCTCCTCCCTTCGGTCTGATTTACGAGAGAGAAAGAAAGAGAGAAGATTGTAATGTTGCTACGCTACTTAGAGCTCCATGGTGAGGAAACGGGA chr4 - 94230402 14838092 14838091 14838290 79392113 79392112 79392311 199 TAATG--TGTGAATTTGGCCGACAGCACAGAAGGAAAAAGAAAATCAGGACTTACTCACCAAGGAGGAATCCCTGTGACACCACATTCCATCCTATAAAGGAAGTGAAAGTGCTCTTCCCTTCGGTCTGATTTACAAGAAAGAAAGAA--AGAGAAGGTTGTAATGTTGCTACACTATGCACTGTT--ATGGAAAGGACAAAGGA .....--...x.........:.x..:.:...........-----.....::..........x:-....:........x.............:.......................:...................:...:........--.......:...............:...:x:.xx.:.--....x:....x.x:... 5M2D32M5I19M1I84M2D36M2D17M 165/193 85.5% 199/94230402 0.0% 12/193 6.2% 1358512 NA +10393 chr4 + 190214555 16202455 16202454 16202641 187 AACTTACCTTAAGCCATAGCAAGGCAAAGTGAGGAGCCTGAATAGTGCCAGGAAAACTCTTAAAGGAAGCAGGGTGAACACATACAAAAACGCATCCAGGCACAGAAAGATTCCAAAAACCATCAGCTGAATTTTAACAAGGAGAGAAGAAAAAAAAAAAGTATTTTAAAAATACTTGTAGATGAAA chr4 - 94230402 14842071 14842070 14842251 79388152 79388151 79388332 181 AACTTACCGTAATCCATAGCAAGGCAAAGTGATGAACCGGAACATTGCCAGAAAAACTCTCAAAGGAAGCAGGGTGAATATATACAGAAAAGCATCCAGGCACAAAAAGATTCCAAAAAACATCAACTAAATTATAAAAA------CAAAACAAATGTTAGTAGTTTATACATAGTTACAAAAAAAA ........x...x...................x..:..x...:.x......:........:.................:.:.....:...x.............:..............x.....:..:....x...x..------x.:..x...x:xx....x....x.x...x..::.:.x:... 140M6D41M 146/181 80.7% 181/94230402 0.0% 6/181 3.3% 1360384 NA +10012 chr4 + 190214555 16213757 16213756 16213925 169 AAAAATAGT--ACCTTTTCCAATTCTCTTGGTATTCGCAAACAAGTGTATACTCTTTCTCTTCTTTCTGTATACTTGGCCTCATTATGTTCAAGGAAGTACCCTCTTGTTAGTTCAGCACTGAGGAACCTCAACAATGAAAGCTCTACAGAAAAGAAAAT-----GACAGAAAACA chr4 - 94230402 14844818 14844817 14844993 79385410 79385409 79385585 176 AAAAGTACTTCACCTTTTCCAGTTCTTTTGGTATCCGCATGCATGTGTATACTCTCTCTCTCCGCTCTGTGTACTTTGCTTCATTGTGCTCAAGGAAGTAACCTCTTGTTAGCTCAGCACTGATGAATCTCAGCAATGAAAGATCTACATTCAGGGACATACACAAGCAGAAAACA ....:..x.--..........:....:.......:....x:..x...........:.....:.x:.....:.....x..:.....:..:...........x...........:..........x...:....:.........x......xxx.:.:.x..-----::......... 9M2I149M5I11M 138/169 81.7% 176/94230402 0.0% 7/169 4.1% 1368939 NA +8976 chr4 + 190214555 16226067 16226066 16226444 378 CCCGCCCGAGGAACTGTCAACGGCCGCGGAGCCTCGGCAGCCTCGGCGGCTCCGCGCGCCCACAGCCTGGGGAGC-----CCCGGGAGGCAACGGCAGCCGCGCGGCTCGGGGGCCGGGGTTCCAAGGCGC-CCCCGCCGCCCTCGGTCCCCAGTCCG----CCCCTCGGAGCCCGCCACGGCCTAGCGCCGCCCGCCTCACCTGTGCGGCCCCGGCGCCTCTCCCGCCGCCGGTCGCTCTCGTAGAAGCCCAGCGTCTCTGTGAGCTGAGGCGCCGGCGGGGGCCCCTGTCCGCC-----GCTGCCGC--CCGGCTGCTC-----------------CGCCTCGCCGCGGCCGTCCCGCTGCGGGCCGTCCACGCCGCCACCGCCG---------CCTTCT---------CCCGGAGCGGCCGCGTCGC chr4 - 94230402 14849780 14849779 14850182 79380221 79380220 79380623 403 CTCGCCCAAGTTCCT--CGGCCGCTGCCACAACCCGTCAGCCCAGGCCGCTCCGC----TCACAGCCCGCCGCTCGCTCGCTCCGCAGGCA-------CGGCCCGGCCTGGCACCCG---CTCCGGAGCGCGCCCCGCAGGGGTCGGGCCC-AGCCCGGGGACCTCTC--CGCCCGCCCCG--------CCGCGCTCCTCACCCGAGAGGCCCCGCTTCTTCTTCCTGCCCCGGTCGCTCTCGTAGAACCCCAGCGTCTCCGTTCGCTGGTGCGGCGACGGCTGCCCCGGGCCGGCGGGAGGCGGCCGCAGCTCGCTGCTCCCCCACAGAGTTTTCGGCTCCCCACGGCAGCCGTCCTGCTGCAGCTGCTCCGGGCTgccgccgccgccgcgccgcccttccccgccgctgcccggcgcggcggcgTCGC .:.....:..xxx..--.::.x..:..x:x:x.:..x.....:x...x.......----:.......:.xx.xx.-----.:.x.x.....-------.x..x....::..x:x...---:...:::....-......x.xxx....x...-..:...----..:...--x.......x..--------....x.x.......:.x.x.......x:x.:...:..xx.x..................x...........:..xx....:x...x..:...xx.....x.x...x.-----..x.....--.:x.......-----------------.x..:.:.x..:.......:.....:.x:xx...:x..:...:......---------.....:---------.....x.....x....... 15M2D38M4D16M5I11M7D19M3D11M1I19M1D6M4I6M2D11M8D107M5I8M2I10M17I49M9I6M9I19M 256/351 72.9% 403/94230402 0.0% 79/351 22.5% 1376287 NA +3283 chr4 + 190214555 16228661 16228660 16228743 83 CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAGAAGAGGAAGCAGCCGTGCCAAAAAAAAA chr4 - 94230402 24662128 24662127 24662210 69568193 69568192 69568275 83 CCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAA ....................:.xx:..:x:.::....:.:.x.:.:..:.::x.:.:......::.:.:.x..x:x..::... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -8433467 -85796935 +3201 chr4 + 190214555 16246671 16246670 16246749 79 TTCAGAGACCATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTGGTTTTTTTGAGATGGAGTCTCGCTCTGTCACC chr4 - 94230402 71837895 71837894 71837971 22392432 22392431 22392508 77 TCCAGA-ACCAATTTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTTAAATAGAAGCCAG-TCTGTGACC .:....-....x..x....x.x....x...x...........x...x........x.:..:..:x.:x.-.....x... 6M1D62M1D9M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% -55591224 -38639178 +3169 chr4 + 190214555 16262085 16262084 16262198 114 CAGATGACATATATATATGTGTATATATATATATGTGTGTGTTTGTATATATATATGTGTGTGTATATATATATGTATATATATATACACACACACACACAATACTCTTCATTG chr4 - 94230402 51537730 51537729 51537840 42692563 42692562 42692673 111 CAAATAACATAATTAAACATATAGATGTATGTATTTCTGTGTCCGTTTATATATATTTCAGTATAAATTTATTTCTGTAGATGGGTATAT---CAAGTACTGTACACATCACTG ..:..:.....xx..x.::.:..x..:...:...x.x.....::..x.........x.xx..:..x..x...x.x.:..x..:x:..:.:---..x::..x:...x.x...:.. 90M3D21M 72/111 64.9% 111/94230402 0.0% 3/111 2.7% -35275645 -58954757 +3160 chr4 + 190214555 16262115 16262114 16262183 69 ATATGTGTGTGTTTGTATATATATATGTGTGTGTATATATATATGTATATATATATACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ..:.....:...x..:...x.:..:.:.x.:::...:...::x.::..xx...:.:............. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 7866327 NA +3655 chr4 + 190214555 16262117 16262116 16262185 69 ATGTGTGTGTTTGTATATATATATGTGTGTGTATATATATATGTATATATATATACACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ........:.x...::...x.:....:.x.::....:...::x..:..xx...:............... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 7866329 NA +13071 chr4 + 190214555 16271351 16271350 16271624 274 TGATCATAAGCAAAGTCAAACCTAATATTAGTTTGGATTTATATTACTGTTAATATTATTTACTCTCTGAAAACAGACTGCCCCCAATTAACATTGTGAATTGTCTGCCCTGTAATGACCAGATATTCCATTCTATTACATTATTGAAATCATTTGCATGGTAATTATGGTTTAGCTCTATCGGTAATTGGAATTGTTTGCCTTCTGGTAATGTTGTAC-AATGGTGGCTCATTAATCACATAGAAAACCTTGCCACGTGGCAGAATTAAGGAAG chr4 - 94230402 14870027 14870026 14870296 79360107 79360106 79360376 270 TGGTTATTAACTGGATAAAACCTGGTATTAGATTGGCTTTGTTTAATTTCTAACGTTATTTACTCTGCGATAACTGACTAACCTCAGTTAACATTGTGATTTGTTTGCCCTGTAATGACCAGATATTCCATT-----ACATTATGTAAATTATTTGCATAGTGATTGTGATTTAATGTTATTGGTAATTAGAATTATTTGCCTGCTGGTAATGCTGTATAAATGATCTGTCATTAATCATGGAGCACGCCTTACCAAGAGCTCTAATGAGAAAAG ..:.:..x.:.x:::.x......::......x....x...:.x.x.:.x:...::...........x:..x...x....:x..:..:............x....:...........................-----.......xx....:........:..:...:..:....::x:...:.......:.....:.......x.........:....:-....:.xxx..........::x..x.x:....:...x.x.x:xx...x.:::... 132M5D82M1I55M 200/269 74.3% 270/94230402 0.0% 6/269 2.2% 1401324 NA +20012 chr4 + 190214555 16315670 16315669 16316163 494 ATAGGTGGCGTGAAATTTCAGATTTTATGCAAGTTCACGGCTAGAACCAATGCACAATTACTGCTAAGAGTTTGATTTTGTCACTGTGAAAGCCCCGCGGATTAGGCCTTTCAGAAGAAAGGGAAAAGCCGCTTCTGAATTTTTAGCCTCTGTTGGGTACTTCACCATAGAACAGTGCTCATACTGCCAGTGCATTTACAATGTAAATGTTTTCTTTCCAAGGTCAAGGTTTTAGAGCCCAAGGCCACTATTGAGACCGCAGGGGCAGAGCCATAACAATTCTGCTGGCATCCTAAAAATAAAAAGCTTTATTTTCAAATTG-ATGATGTGGTTTAAAAGACAGAGTCTCAATAATTTACTTTT--CTGCCACTTGCATCCTTTTTCTGTTGATTGGGCCTGGGAGAAAGAGGTTGGCTTCATATCGAGGGAGTGCCAATTTCTGAGACTTGCGTAAGACTAACCCTCTTGGATTCTGGTA-CTAATGTCCCAATCTT chr4 - 94230402 14879273 14879272 14879744 79350659 79350658 79351130 472 ATTGGCAGTGTGAAAGCTGCGAATT-ACACAGGTTCACTGCTAGAAGTAAGTCACAATTAGTACCAAG----TGCTTTTACCACTA-AAAAACCCCACGGATTAGGCCTTTCAGAATAAAG--AAAACCTGCTTCTGAACTTTTTGCCGCAGTTGGATACTCGCTCGCAGAATAGTCCGCATACTGCCAGTACATTTACAATGTAAACGCTTTCTTTTCAAGGTCATGGTTTTAAAGCACTACACTGCTATTGAAACTGCAGGGGCAGAGCCTGAACAATTCTACCGGTTTTCTAAAAATAAGGAGCTTTATAGCTAAACTGCAGGATGTATTTTAAAAGAAAGAGTCTCAACATTTTTCTTTTTACTGCTACTTGTATCCCATCTCTACCAATTTTTACT---------------GCTTTACA-CAAAGGCACATCTATTGCAAAGCACGGCATGAAATCAACACTCTTGCATTCTGGCAGCTCA--GCCCAATCTT ..x..::.:......x:.xx..x..-.::..:......x.......x:..xx........x.:.:...----..x....::....:-:...:....:...................x....--....x.:.........:....x...x.x.....:....:xx:.::....:...x.x............:...............:.:.......:........x.......:...x.x.x:.::.......:..:..............xx.........:.:..:x.:..........::........xx::...:..-.x.....:x.........x..........:.x...x.....--....:.....:....:x.:...::::...xxxx..---------------....:.:.-.:.:..x::::.x...x.x:..xx:x..:.:.:.::...x......x.......:.-..x.--x......... 25M1D42M4D14M1D34M2D199M1I41M2I35M15D8M1D56M1I4M2D10M 349/468 74.6% 472/94230402 0.0% 30/468 6.4% 1436397 NA +3014 chr4 + 190214555 16337782 16337781 16337845 64 CATGTATATATATGTATATATATACACATATATATACATATATATACATGTATATACACACACA chr4 - 94230402 8395787 8395786 8395850 85834553 85834552 85834616 64 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACA .....:.:...:...::...x.:.:::..x..:...::...::x.....xx...:......... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 7941995 NA +18460 chr4 + 190214555 16351634 16351633 16352142 509 TTTCATACATATTCTGCAGATAATCTTTTGACTCTTCCTTTTTGTCTCCTTTTAACGT------CCGCAAATCCTTTGACTAGGGCTATGTCCCGAGTGCTATAGCCACTCTTATTTCCTGTGGTCTTTTCAAATCCATTCTTTTTAGCTCCCTCTGTTTGGTTGAA-----------GGATTAGAGCTTCTTAGCCTTGAAGCCAATTTTGGAATGCAGATTGAGGGTCAATGGTGAAGAAACCGTTTCCTCCTTCCATTCTT-GTCTTGAAGTATCCTTTTTGACTTACATGTCTAGAAACCAACAAAAGCCCTCTATTATTATGGTAGTTGGAAAATGGCCCAGTTCCAGCCCAATCCTT-------TGCAGCGAAGAGGTCCTTCCCCCCATTCTTGCCTTCTGCTTTAGCATTCATTATTGTGATGCCTTGTTTACTTACATTTCTATCTGGTGATAATAGGCTTTTCAGCCTTTGGGCTTCAAGGTCCCTGGCTGCAGAAGGAAGGCCAAGAAAAAG-AGAGAAAATAT chr4 - 94230402 14886484 14886483 14887004 79343399 79343398 79343919 521 TTTGAAATATACCCCTGGTATAATTTTTGGATTATTCCTTTTTATCACATCTTAACTTTGAATACCAAAAATCTTTCTCCTGTGGATAAG----GGTAGTTACTGCCAACCTAATTTCAAATGGCCTTTAAAAATCCAATCTTTTTAGCTCTTTAGGTTTGATTGTGCATGGCCTGTGGGATTATAGCTTCTTAGTTTTAATGTCTATTTTTGAATGCTGGTTTGGGGTCAGCGGTTAGAAA-----CTCTCCATATCATTTTTAGTGCTGAAATATCCTTTT-GATTTACATGTCTG--AAGCGACAAAACCTCT-TATTGTTATCATTTTTGAAAAATTGCCAAGATACAGCCAAATCTTTCACTGCTTGCTGCACAGAGCTGGTTCTTGCC-TTCCTGTCATGTACTGTAGAATTCATTATTGTAATGCCTTGTTTACTTACATTTCTTTCTGGTGATAATAGGCTTTTCAGCCTTCAGCATTCAAGGCCTTTGTCCGCAGAGGAAAAGAAAAGAAAAATCAGGCAAAACAT ...x.x.:...::.:xx:x.....:...x..:.x.........:..x.x.:.....x.------..:x.....:..:xx..:x..x..x.----.:xx.:..:x....x:..x.....xx:...:....xx.......x............::.xx.....:...x:-----------......x..........::..:.x.:.x.....x......x.:..x:......::...x.::..-----:..::.x.x:....:..-..x:....:.........-..:..........:--..x.:......x.:..-....:....x:.xx...:.....x...x..x.x.....x....:..-------...x..:x....x.xx...::x..-...:..:.x.x.:..x...x............:.......................x...........................::.xx.......:.::..x.:.....:.:..:.xx........x-..:x....:.. 58M6I26M4D73M11I64M5D17M1I18M1D14M2D16M1D46M7I24M1D128M1I11M 362/495 73.1% 521/94230402 0.0% 40/495 8.1% 1465150 NA +3154 chr4 + 190214555 16361156 16361155 16361257 102 ATCACACTGATAGGGCTTCTTGCCCGAGTGAAGCCTTGAGTGCTCGTTAAGGTGATGCTCGTGTTTAAACGCTTTCTTACAAATCTGACACTGATGTGGTCT chr4 - 94230402 38381863 38381862 38381964 55848439 55848438 55848540 102 ATCACACTGAAACGGCTTCTCTCCGGTGTGGGTTCTCATGTGCTCATCGAGGCCTCGTTTTTGACTGAAAGCCTTGTTACACTCAGAACATTGGTATGGCTT ..........x.x.......:x..x.x...::x:..::x......:.::...:xx:.:.:x..x:.:..x..:..x.....xx:xx:...:..:.:...::. 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% -22020707 -72209695 +3144 chr4 + 190214555 16397147 16397146 16397219 73 TAATATTATATGGACATTGTTGTGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATAT chr4 - 94230402 19559272 19559271 19559343 74671060 74671059 74671131 72 TAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATAT ....x..x.x.:.x:...x..x.x.:...........:................:.xx..-..x.x.:..... 60M1D12M 55/72 76.4% 72/94230402 0.0% 1/72 1.4% -3162125 -91068277 +3307 chr4 + 190214555 16397175 16397174 16397249 75 TGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATAAAAAATATGTATGAA chr4 - 94230402 37363040 37363039 37363114 56867289 56867288 56867363 75 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAA .....:::..:x.:......:..::.:.x......xx:.:.....:.:...:...x:.:.x.x.........:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -20965865 -73264537 +13440 chr4 + 190214555 16398980 16398979 16399393 414 CTTGTTCAAAGTCTATGGTTTATTTTTCATAATACTAATTGACAGGGTAAGCTATTTTATTTTTCCTATATCTATGTAATTAATATGTCCACTTTAGAAATCAATTATCCTTGATAATTACCATTGGTGCTATGG-CTATAAACTGAATGCCAGTCTTGCTAACAAACT-----GAATAAGACATAATTTCTTGTTGTTCAAAGAGATGATAAACTCTAATCAGCAGCAAATTCAATCAAAACTTACTGACATCAATTGAAATCACATTAGACTTTGTAAAAAATAGGATAATTATGCTCGTCTTGTAAGTTGCAGGTATTGTAACAACTCTAAAATGTGGGCCTGTTTGAATAAATG-CTTATGTTTGCTGGCTCTACGCAAGCAG-----ATGCAGAAATGTATAATCTGCATAAATAAATCAG chr4 - 94230402 14890812 14890811 14891219 79339184 79339183 79339591 408 CTTCTTCGTAGTCTCATATTTGTTTGTTTTAAAACAGAATAATAG------TCATTGCATTTC-CTTACATCTATGTAATTAATATATCCTCATTAGAAATCAATTAGCTCTGATTATTCCCATTGGTGCCATAGTTTGTACACTGAATGCCAATCAGTGTAATAAAATCGGTGTAATAAAATATAATTTCTTGTTGTTCAAAGTAATGATCAA--CTAATCAGCAGTAAATTTAATCAGAACATATAAACATCAATCATAG--ATATTAGTGCTTGTAAAACATA--ATAACCAGCTACATCTGACAAGCTACGGGTATTGAAACAATTGTAGACTATGCGAACACTTAAGCAGATGATTTACACATAC-----ATATGCAAGCAGTTTAAACTTAAGAATGTAAAACTTTCATGAGTAAAGTAG ...x...:x.....xxx:...:...x.:x...x..x:.x.:.:..------::...x:....:-.:..:.................:...x.x..............x.::....x...x..........:..:.-:.:..x...........:..xxxx...:...x.-----x.....:.:.....................x:.....x..--...........:.....:.....:...x..:x:........::x.:--.:.....xx:........x...--....::.xx:x.:...x::...:.:.:.......x.....:.x..:.x.:..x.xx:::..:.::.:...-:...:::x.:.-----x..:........-----.:x:.::......x..::.x...:.:....x:.. 45M6D12M1D71M1I33M5I40M2D46M2D22M2D70M1I11M5D12M5I34M 280/396 70.7% 408/94230402 0.0% 30/396 7.6% 1508168 NA +3276 chr4 + 190214555 16408889 16408888 16408927 39 AATTTATTATATATATATATGTGTGTGTGAGTGTATATA chr4 - 94230402 27034819 27034818 27034857 67195546 67195545 67195584 39 AATTTATTATATATATATGTGTGTGTGTGTGTGTATATA ..................:..........x......... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% -10625930 -83604472 +3007 chr4 + 190214555 16441864 16441863 16441925 62 ATATATATATATACACATATATGTGTGTATATATGTATACATACATATACTTATATACATAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ...:.x..::.....x..:...:.::::.:::.........x...........:::..::.. 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% 8845451 NA +3321 chr4 + 190214555 16441925 16441924 16441969 45 CATATATGTACATATATACACACACACGTGTGTGTGTGTGTGTGT chr4 - 94230402 49987094 49987093 49987138 44243265 44243264 44243309 45 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGT .......::...x.:.:........................x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -33545169 -60685233 +6391 chr4 + 190214555 16449493 16449492 16450347 855 AATGGGGTTTCTGCAAAGGAAGCCTCTTTGAACCTTTTGGGCTGCTGAATCGTGTCAGCCTGGAGACA-AGAAGTTTGTTATGCTCATTGTGTCA-GCTGCAGACATAATTCATGAAACCATCCCAGACACAGGATGTCACCAAGTGATGCTTCAATTTTACAGTCTCCCAGAGCTCCTGT----------TGGCAAACAGTGTTGGATGAAAGCTGGGAGGTTTTCAAAGGCCAT-GGGCCTTCTTTTCCTGCC----------CCTTGGTTCCCCTTTACTTTGCCTCCTCCATCTTTGCCTTTCTGTATGGGTCATG-CTGTGTGCCCCTAAGATTTTT--------AAAGCCAATTAGCAGGTTAGAGACTGTCGAGGCATATTGACCTGTGAGATCACAGTATTTACTGTCACCGTAATTTCTCATAATATTGAAGCTTATACTGGCCCTCTCCATGGCTTTGTTCAAAGCCTGGTGGGGAGAAGGCTGTTTAGATACT------------GTAATCAGAATTCTTG----AGCTGAACCGTTTTTTAATTACAGCTTTGATAG-GGAGCTGTGCAGTTTGGGAAAGGAGTC------CAGCTGGGAGTTAGCATCTCTTTGATCACAAGGCTGAACGATTCACTTTGATCACGGAGACAACAGTTCATAAAAGAGCCTGGTCTCT---------TTCTGAAATTTGCAGGTAAACAGAGGGATCACTTGAA-TGATCCCTCTGTGGAATGAGCAATTCAGATCCAAGACAATGGTCTTCTTTGAACTGGATTTAGAGGCCTATTGATTAGCATAGCAAAGGGGATTG-----------------ATGGGTGAAAAAA---------------GGTGGCTTTAGTCCCTAGACAGGTGCATCAAGAGGTCACTGGCTAGGTACTCTGTGGTTGGGCTCCCAGGTTTG chr4 - 94230402 14898556 14898555 14899442 79330961 79330960 79331847 887 AATAGGATTTCTACAAATTGAGGTTCTTGAAATTCCTTAGGCTGAGGAATTATGTCAGCCCCGAAAAGCATGGGTTCATTATTCACATCGTGTTACACTGCTGACATAATTCCTTAA-CAGAGTGGGACATGAGGTGTCCCAGTTTGATTCTTCAACTT-GCAGTC----AGTGCTTTTGGCTTCTCTAAATAGTAAACAGTTTTGTGTGCGAGCTC--CTGTTTTAAAAATCCTTTGAGCAGTGTATCTATATAAAAAAGAAAATCTGGGTTAGCTGTGG----GCTACCAGCA-ATTTATCAAGCAGTATTAGTTATGTCTGTGGG------ATATTTTTCATTATCTGAGGATTATTAG-----TAGAGACACTATATACATAGTGAT--------------TATTCCTCG--ACTAATAATTGAGATAATATCGATTTGAAGCCCAGTTTCATTAACACCTTAGCACAGAGACTATGATCGTGAAGGGTATTTTTTTTTTCCCCTCCAATTTGTAATCAAAAGTTATTTAATAGTAAAATCAGTCTTCACTTGTAACAGAGGTTGTGGACTTCTGGAGTTGGCAGAGCCAGCTGCTGGGCTGCTGGGAGCCAGACTCTTTTTGATCTTCGTATTGAATGGTTTCCTTTGATCACCTTGACAATAGATCATAAAAGAACAGAGCTTTTACCCATATCTCCCTAAATTTGCAGGTAAATAATGAGATGGTCTGAACTGAGGC-----TGGAGTGTAAGATTTTTAAC--AAACAATTCTCCCCTTTGATGTAGACTTAGCAA------AATTAGCATATAAATGAGCAATGCTGCTACATAAGGACATGTGGCTGAAGAAAAGGGATAATTGGACTGAGGGGGTTAGTTTCTAAAT-----------GAGGTCATTTGCTAAATGACCAGCAGTTAGACT-ACAGGTGTG ...:..:.....:....xx:..x:....x:..::::..:.....xx....::........:x..:.x:-.x::...::....x.x...:....:.-:....x..........x.x..-.x:xx:x:....:::.:....x.x:xx....x......:..-:.....----..x...::..x----------.:.:.......x...x:..x:....x--xx.....x...:x..x.-.:..xx.x.x.::x.::x----------:..x....xx.:x.x:----..:x..xx..-x...::.xxx.x....x:..:...-.....x.------.x......--------:.:.x:x.....-----.......xx.xx.x:....x...:--------------....:x::.--..::xx.x..xxx.......:..xx:xx.xx.::.::::x.:x.::x...x.:x..:..x..:xx:xx.x.....x.:...xxx.x:.------------.......:..x.:x.x----..:x:..:.:x.:..:.x..::.:.xxx.:.x.-...x:.x..x....x.x::.:xx..::------.x........::..xx...:.......x:x:x::....:.:..:x..........xxx.....:..x..........:.xx:.::.:.---------.:.:x...............:.:x.:...x:::....-...xx.-----....:..x:x:...:xx.x.--.:.....xx..::......xx.:..:....x::------:.........xx..x.:.x.x..-----------------:...x....:...---------------.:x..xx.....::...:.:-----------.......:.x....::.:x:.x.::...:.:..-x.....x.. 68M1I26M1I21M1D41M1D6M4D11M10I26M2D17M1I18M10I16M4D10M1D24M1I7M6D8M8I12M5D24M14D9M2D88M12I16M4I33M1I27M6I88M9I37M1I6M5D20M2D33M6D23M17I13M15I20M11D33M1D9M 487/790 61.6% 887/94230402 0.0% 162/790 20.5% 1550937 NA +3129 chr4 + 190214555 16451394 16451393 16451448 55 CTGCTATGTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCAGTTGC chr4 - 94230402 5847641 5847640 5847695 88382708 88382707 88382762 55 CTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..x.....::.............:.::.........x.xx....:....xx.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 10603753 NA +6895 chr4 + 190214555 16477178 16477177 16477471 294 AAACAATGTTCTTAAAAGCTTTTTTAGTCCTT----------CAGTCCCCCAG-AGATCATTCAAGGAGAATATAATTTTATGTGATGAAATGAGAACTGGAGGAGAATATAAT---AAGTGTTAAGTGATTGAATCAAATTGAGTGTTTGCT-AAATGTTTCCTAAATGGGTTGACAAAAAAAAAGGCCATGAG----ATTCCATGTAGCCCTTCAGGACTG-GTGGTCTTGACTAGGTCAGATGTCTGAGAAGTTGTGGGGACCACATTTTTTTATTCAAGCAGTGC--TAAAGAAATAATATCTCTTAGAAGA chr4 - 94230402 14906061 14906060 14906370 79324033 79324032 79324342 310 AAACACAGTTCTTAAAAGCTTTTCCAGTACTCAGACCCTCCCCAACCCCCCAGGAGATCGCTGAGGGAGGATGAAACTTTATGTGATGAAATGAGAATTGCAGTCAAATGTGATTAGGAGTGTTAAATGCCTGTTTCATATCAAGCACTTGCCAAAATGTCTCCT-AATGCACCTACAAAGGAGA----CACTAGCCTTATACATTATAGCTGTTCAATACAGAATTGTACATACTATTTCAGATGAATTCAGAGTTGTTGAGA-CAGAACTATTAATTAAACTAGGGCAACACACAACTTGAAGCTCTCAGGAGA .....xx................::...x..:----------..::.......-.....::.x.:....:..:x..:....................:..x..xx:...:.:..---:........:..x:..xx...x..::..:::....:-......:....-....x:::x.....::.:.----..:x..----..x.xx.:....:x....:x..x.-:.x..x:xx....xx.......xx.xx::......x.:..-..x.x:.x..x...x..x:..x..--:.x.x..x.x:x.x....:..:... 32M10I11M1I60M3I36M1I11M1D19M4D6M4I24M1I40M1D24M2I25M 197/288 68.4% 310/94230402 0.0% 28/288 9.7% 1571117 NA +90648 chr4 + 190214555 16501546 16501545 16503849 2304 TCATTAACACAGTTTATTATTGGCACACTTATCAGTAAAGCATACATAAAATACAGCTGTTTTTTA--ACACACGGAGCCACTGTGCCTTTACATGTGTGGAGGAACATATTAATATGCAAATGGAAAAA--TTAATT-CTCTTATAAAGTTTCACATAAATACACTGGAGTTGCCCAAAAACGAAAAGTCCCCATAAAA------------GAACCAGGT--GAGAGCTTTACAAAA-TATCATACAAGAAATATACTATAAAAAGAAAGGATG-----GTCAACTCAGGTACAATTAGAAAACACACAAAGGTTC-AGGTTTATTAAACTGCCCACAAAACCAATGGATTACATGGCTTGAAAATATTTGGATCAACAGCAACTTTACAAATGCATAAATTCTTAAGGGTCCAATTGTCTTTCTTTACTTAAAAATCTGCCCTGGTGTCTTTGATGAAAAAAATGACATTTCTTGTTTCAGCACTTGGGCTAAATTGAGTCGACTCAAGACAAGA--ACCAATTGACATCAGCTCAACCATAAATTACCTTGCTGGGCCCTCTTAGCTGTTGCCCAATGAAAGAAAACATAAAGAAAAAAAAAATAAGGTACATTTAAATTACTTTCC----AAAGCTGATTTTTTTGTCTTTTCTTTTTTTACTGAAACAAGAAACTCTCAGATGCAAGTCAAAAAGCAGAAAATATTTTACAATATTAAAAAGTCATCTGTAGTTAGGTTCGGCATATTAATGAGATCCTGAGCACTGAGCATTTATGGACAATATGGCCTTCGTTTGATGCATAAAAAGGAAA----TTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAAAAAAAGAAAGAAGAAAGAAAATCAGATCATTGTGGTTTAGAAATAGATATT---TGCATGGAAAAGTTTTTATCTCTTCTGTTTCCTCTCCTGTAAGTAAAGATTTGCAATTGTAAT-GATCACCCACGGGCCTAT-TGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGGTGGGGGGTTTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGAAGTCCTCCTCGTCGTCCATGCCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTCGTCCCCAAACTCACCTCCCATCAGAGTTGGCTCTCCTACCACCATCACATCCTGTGAACAGCAGCTGACATT-ATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTG-TACT-GTACAACGGGGTCAA----GTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGAAATAAACATCGCCTCCTGAT---GTGTAACAACC---ACGCGAGTTTATGTCCTTAGTGCGCAGCCTGACACTGGAGAACGAGCAATGCTAGCAATCTGCAGAAATAAAAA--------AATGTATTTTTCAAAATTAAAAAAATCCATGCTTTCAACTTGCCGACATTGGGGACTTTTGAGAGGGCTGTGGAACCTTCTGCTGGGTGCTTCTCAATACCTCCAAAAATCTGCCACTTTTATTTAGGGCCTGTGAGTGGCTT----TGGAAACTAGCAGTGACCGGAGACACACGTAAGGTGCAATTCTGCAATATTCACAC-----AACTCATTCCAAA----CGGTATTTTCTCT--------GTCCCAGGGATGATATAC---ATTTTAATTGAAGACAGAATCTCTCTTTTCTCTACTCAGCCAGGCCCTTTTATGCAGCCAATATCCTTGACATTCTGCTACTTAATTATGGTAATTAATTTAGGTAAAGTTTTCGATAAAAACAATGTTCACACTGATTTGACAATTTGCATAGCTAATTAAGTCATTAGCAAAAACCTGCTGATTGCCAACAAGCCTTGAATTTACCATCTGTTATTTCATGGTGCCTGTCACCTATCACCACACAGGCAACCCTGCCACCCATCTGGGCAGTAAAGAGAACCGGTCTGTCCAGCTGGTGCCATAAAGGGAAGATGAAGAACGCTAATTATAATTACATTGATGAAGCTGGTAGTCATCAGAGATGGAAGCGTGCAAG-----AAGAATCCATCTAATCACTCTTTTAAGTACAAATTGTCCTTCCATGCAAATAAGTAAGCCACCTACTGTAGCTGGGAGCAT chr4 - 94230402 14911103 14911102 14913347 79317056 79317055 79319300 2245 TTGTTAACACAGTTTATT---GGCACACTTATTGGCAAAGCATACATAAAATACGGTTGTATTATATAACACACTGACTCACTGTGTCTTTACATGATGAGCTGAACATATTAATATGTAAATGAAAAAAAATTAGTTTCTTTTATAAAGTTTCACATAAATACACTGGAAT---CcaaaaaaagcaaatcaaaacaaaacaaaacaaaacaaaaAAAGGTTTGAGGGCTTTACAAAAATATTATACAAGAAATATACTATGAAAAGAAATAACAACAAAGCCAACTCAGATACAATAATAAAA-ACACAAAAGTTTTAGATTTATTAAGCTGCCCACAAAGTTAATGGATTACATGGCTTTAAAATATCTGGATCAACAGCAATTTTACAAA-GCATAAACTCTCATAGGACTGGGTGTCTTTTTCCACATAAAAATAT-TTCTCATGTCTTTGATGAAAAAAA-GACATTTCTTGTTTCAGTGTTT---------TCAGT-GAGTGATGGAAAGAGTATCTACTGGCATCAGCTACATGTGAATTAAAAATGCTGGATCCTTTAAACGATTAACCAATGAAAGGAAAGTCAAAGAAAGAACAAA--AGTTAC-TTTAAATTACTTTTCCTTAAAAGCTGTTTTTTTTGATTTTTTTTTTT---CTGAAACAAGAAATT-TCAGGTGCAAGTTGAAAAGCAGAAAATATATTACAATTGTAAAAAGTTTTACATAGTTACGTT---------AATGAGATCCTGAGCACTGATGATTTG-GTAAAATATGGCCATTGTTTGATGAGGAAAAAAACAACCCCTCCAATA-GAACGCATGGTCAGAAATTTGCCATGAGACGCTGCTTAATTTTCCATTATTTTAATTGAGGTCAGTGCCAGTATC-ACGTTGTATGTGAAAGCTTCCAGGAAACGTACATGGAAGCTCATACAAGATTTTTCTCT-AATTAAAAAAGAA------------AAAATCAGATAGATTTAGTTTAGAAATAGATACTGTATCCATTGAAAGGTTTCTTTAAATT--GTTTC---------GAAGGATGCTTTGAAACAGTAATTAATAACCCCCTGACACACACGGCAGTGGGCACTGCTGCTGAATAACCTATTGGGAAGCTTGTGGTGTGGGGTTTTCAGATTTAGTCTCCTGGTTAGCAGGAGGTTTGCTGTTCCACGGGCTGTTATTTCCCAGTGCAGGTGAATTGTTGAAATCTTCTTCATCATCCATGCCGTTTGCTGCATCATACTGTGTATTCTCTAATCTAGTGATAAGCCTTTCGTCTTCGTCTCCAAATTCGCCTCCCATCAGAGTTGGTTCTCCTACCACCATCACATCCTGTGAACAGCACCCAATATTTGTTATATGGAAACCTTGAGAGAGAAAAAATCAACTTAAAAAAGTTATG-------TTAGAGAATTTGCATCTCTTAATTTTGTGATATTTGAACAACAGAGTTAAAAGTGCCTGCACAGTAGGAGCCAGGAGACAGGCTTGC----------------ACTTTGTTTCTAGTTTGGGTGCAATACCATTAACACGA---CATGTCTCTAG-------CCACATGCTCGTGGCTCTGCATCTCAGG--AGCCCCAGAACAGAAAAGCAGGTAGACTGAATTTTTTGTTAGGAAAACAAGC-AGGCTATGAAACTGCC----TTAAAGTCCTGCTTGAGGAATTTGG---------------GCTT-----TATCC-----AGTCTTCCTTTCCT-------------GAGCCGTTTCATATGGAAA------GGCACCAGGG-TGCTTCTCAGTTGCAGCTCTGTGCTACGCGTATTTTAGAACTAGTTTTAAAGAAACCACATTTCTTATCCTTAGACTTTTCAAATGTGGAGCACGGCACTCTAAT-AAAGATGGTAACTCTCTTATCCTTAGCCAGCCAAGCCCTTTTACGCATCCAATATACTTGACATTCTGCTACTTAATTATGGTAATTAATTTAGGTAAAGTTTTCGATAAAAACAATGTTCACACTGATTTGACAATTTGCATAGCTAATTAAGTCATTAGCAAAAACCTGCTGATTGCCAACAAGCCCTGAATTTACCATCTGTTATTTCATGGTGCCTGTCACCTAACTCCATGTAGGCAACCCTGCCGCCAATCTGTGCAGT-AAGAGGACCAATCTGTCCAGCTGGTACCGTACAAGGAAGATGAAGAGGGCTAATTATAATTACACTGATGAAGCTAGTAGTCATCAAAAACTGAAGCATGCAAGAAAGAAAGGATTCATCTAATCACTGCTTTAGGTACAAATTGTCCTTCCATGAAAACAAGTAAACCGCCTACTGTACTCCAGCGCAT .::...............---...........::.:..................:.:...x..x..--......x..x:.......:.........xxx:.xx...............:.....:.....--...:..-..:............................:.---.......x::x..:..xxx.:....------------:..xx....--...:...........-...:..................:........x:.::-----.:........:......x.x....-.......:...:-..:........:...........:::.................x.......:..............:........-.......:...:.x:..x.:::x.......:.::..x.......x.-::..x:..................-.................:::..---------.x...-..x.x.x.:x....--.:.x.:..:........xx.:xxx..x.x.xxx......::...:.x.:.x:..:x..........:...xx:.......:..x...--..x...-.............:.----.......x........x:....:.....---.............:.-....:.......::...............x.......xx........:x.x::......x...---------....................xx....:-.x.x.........x.:........x:x.....::x..----.:...:.-:...:.:.x..:.:..x:x.....x:...:..xx:xx.:.....:x.:.........:x::..............-:::..::x......:..:....:....x.xx..........:.:xx:::..xx.:....-.....:....:..------------..........x:x.x.:...............:.---.x...x....:....:.x.xxx..--.....---------:.:x:.x.x....x..:x.....-:..x....x.x.:.x:.:-:.:......::x...x...:..x:.x.:...........:..x....x.........x.....:.....:..:x.:..:........:.................:..:.....:..:..............:..:..:..:..:...........x..:........:..:..:..:..............x...........:.....:.....:..:.................:................................x.::.:...-:...:.x..........:......:..:x...:.......x.::x:..-------.::.:....:.:x:x.xxx:.xx:.:...-..:.-.x.....:.:..:..----.:..xx.::x::..:...::..x:..x::...x----------------..x.:.::..:x.x.---...:..:.x.x---..:...---:.....::...-------..xx.::..x.x.:x:xx...x:x.x:.--.x.:x.....xx:....--------.x..x......::xx.xx....x..x.-.x...x.x..x:....----..:::.x.:.x:xx....:x.x...---------------....-----..:.:-----.:...x..x:.::.-------------...:x.:..----......------.xx...:.:.-::.x:x.x..x....::....::x..:x.::.:-----....x:..::...----.x::....::.x.--------x.::..::x:..:x::..---.:.:....-:....::.x.x.......x..::..x:......:.........:...x.......x....................................................................................................................................:.......................................x.x...:::.............:..x.....x.....-.....:...::..............:..:..x.:............:x................:..........:..........:.:.:x.....:......-----...:..:............x:....:....................x...:......:..:.........x::x:.x.... 18M3D45M2I62M2I6M1I33M3D25M12I9M2I15M1I36M5I24M1D12M1I75M1D46M1D24M1D22M9D5M1D14M2I87M2D6M1D15M4I28M3D15M1D63M9D27M1D37M4I7M1D75M1D59M1D13M12D34M3I24M2D5M9D23M1I18M1I279M1I48M7D29M1I4M1I15M4I33M16D15M3I11M3I6M3D11M7D28M2D17M8I27M1D16M4D25M15D4M5D5M5D14M13D9M4I6M6D10M1D33M5I13M4I13M8I18M3I8M1D265M1D104M5I81M 1655/2154 76.8% 2245/94230402 0.0% 241/2154 11.2% 1590443 NA +19853 chr4 + 190214555 16505716 16505715 16506108 393 GAGGTCCATATGCCCTCAGCTCCCCACAAGGCCAACTTCTGCTCCTTG--CTGGAAGCCCGGAGGTGCCACCAGCTCTCACCCATTTCACATCTTCTCACTAATCCCCCGTGCAAAGACCACCAACCTCTGAGGAGGACTGGAAGTGACTCCTTTCAGGGCCCCTCAATGCTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTGAGGCTGCAGTTCGGGATCGCTCCTAGCCCCTGCTCATGGAGTGAGAAGCAGAATCCAAGGATTAAACCCTAGCCCTCGCCAGACACACACATCGCTGCCGCAGCAGC-TACACAGACCACAGCTGTGGTCATAGTGGCACATGCCTTTGGACCAGA chr4 - 94230402 14915023 14915022 14915390 79315013 79315012 79315380 368 GAAGCGCACATGCTGGTTCCTCCCCGGAGAG---GATTCTGCTCCTCAGACTGAAAAGCTGAAGACCCCACCGAGTGTACCCCATTGAACCTCCACTCACTAATTCCC-GTGCAATGACCACCAACCTCTGAGGAGGACTGGAAGTGACTCCTTTTAGAGCCCCTCAATGCTTCTCCTTAAATTGGCCAGTGGGGGTCACTGCTGTTGAATGACACAAGGCTCCATCCCTCCCAGGGTTGAGGCTGCAGCTCTGGAGTGCTCCTAGCTCCTGCTCATGGAGTGAGAAGCAGAATCCAAGAATTAAACCCTAG-------------------TCTCTTGCACGGCAGCATACACTG-CTATGGCC-TAGTTATGGTAGCACATA---TTTGACTAGA ..:.:x..:....:xx:xx......:x.::.---:x..........::--...:..:x.:.:..::x.....::x.x.xx......xx..x..:x.........:...-......x.......................................:..:...............................x:.........................:.x.............................:..x...x:.........:...............................:............-------------------..x..xx.:.:.....-.....x.-.:.::..:-.:..:..:..:......:---..x...:... 31M3D14M2I58M1D203M19D16M1I7M1D8M1D18M3D10M 297/365 81.4% 368/94230402 0.0% 31/365 8.5% 1590693 NA +15077 chr4 + 190214555 16508495 16508494 16508712 218 ACAGTTAGGATTTCGGGCCTAAGAGGAAAGCGAGACTTACAGGTACCTGACTGGACAGACTCAGGTTTGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGCAATATGGAAAAGGGAAGAGGGA chr4 - 94230402 14922284 14922283 14922498 79307905 79307904 79308119 215 ACTGTAAGTGATTCAGGCCTAAAAGGAAAGTGAGACTTACAGGTACCTGACTTGATAGACTCAGGTTTGCAGCAGCTGACTTTTTCTTGCTGTTGGTACTATTTGCGTTGTTCCCAGCACTGCTGTTCGAAGTGCTGCTGGTAGAGTTTTTCCTTTTCCTCCGTTTGGTTGTCGGTTGTCTTGTGGGTTCTGCTGCAATA---GAAGGGTAAGAAGGA ..x..x..x:x...:.......:.......:.....................x..:.................x.:x.x...:.........:::..:..:.....:...........:........x..............:..:...........:..............:.....:.....................---:..:..x....:... 200M3D15M 183/215 85.1% 215/94230402 0.0% 3/215 1.4% 1586211 NA +10995 chr4 + 190214555 16511978 16511977 16512113 136 TACCTGGCGGAGCCACCATCCTCTGCCACTTCTGAAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACTGCAAGAA chr4 - 94230402 14923577 14923576 14923712 79306691 79306690 79306826 136 TACCTGGTGGGGCCACCATTCTCTGCCATTTTTGAAACAAGCAAGTCTTCAAGCAGTCTCGAGGACTTAGATTGTAAGTTTTGTGTCTTGACATCAGTTCCTGCATTGGCTCCAGTATTACACACAACTGGAAGAA .......:..:........:........:..:...........:.......:.........:.....x..:...........:.....:.........................:...............x..... 136M 122/136 89.7% 136/94230402 0.0% 0/136 0.0% 1588401 NA +3509 chr4 + 190214555 16519728 16519727 16519783 56 AGCCTCTCTGAATCTCAGTTTCCTCATCTAGAAAATGGGGATAATACTACTTATCT chr4 - 94230402 66214158 66214157 66214213 28016190 28016189 28016245 56 AGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCT ..........x...x.::....::.....:x........:......:.:....:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -49694430 -44535972 +3209 chr4 + 190214555 16521986 16521985 16522072 87 CTTAATAAGGGGGTGACCTTGGGCAAGTGACTTAATCTCTTGGTGTTTCAGTCTCCCCATCGGCAAGATTGGTATA--ACAATAGTAAC chr4 - 94230402 11947207 11947206 11947295 82283108 82283107 82283196 89 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATACAATGCTAAC ..:.x...xx.x........:..:x...x.........x::x....::....:.......xx:::.:..x:x....--.....:x.... 76M2I11M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% 4574779 NA +5873 chr4 + 190214555 16525333 16525332 16525506 174 TACCAGGCAACAGCTCTCCAGCTCTGCTCTGACGC--AAAGGAAAGGAAAGATTTCTCAATAATGCAGCACTCAGCTGCTCAATTGCTCCCCAGC------------CATTCCATCACTGTGCGCTTGTATCTGCAGCCCTCTCCCCTCCCAGGGATAGAAGGGAGTTTGGTGAAAAGTAAGATTCAT chr4 - 94230402 14931560 14931559 14931743 79298660 79298659 79298843 184 TGCCAGTCTAGGACTCTCCAGTTTCTCACTAACACCCAGAGGTAGCGAATGATTTCTCAATAATGCAGTGTTCAGCTGCTCAATTGCTCCCAAGCTACATAGCTCATCATGTTTTTACACTGCTCTT-TATCTGCAGCCATTTCAATTCCCAGCAACAGCGAGAA---CAGAAAGAAGCAGCATTCAT .:....x.x.x::........:.::x.x..:..:.--.:...x.:x...x..................:::....................x...------------...x::x.:..xx...x...-...........x.:..xx:......x:.:..x::.:.---::.x:.:...:.:x...... 35M2I58M12I20M1D37M3D20M 120/170 70.6% 184/94230402 0.0% 18/170 10.6% 1593773 NA +33512 chr4 + 190214555 16531295 16531294 16532604 1310 TCCCAGTTCCTCTGGTACTTCCCTGTCACCCTTGCTCCCAGCAGTATCTTTCAGAAACAG-----GAAACAACAATTTCTCATTCTACCATCTCTCTTCACAATCATGTGTGAAGGTGAAGAATGACATTTCCTTCCTCTTAATTCCTCCAAAAGGCAAACAACATATTATTCAGGAGTTCTGCATCAAATCCCAACACCTGATACGCCTGATAGGCAAACCATTCACTTTCTCTATTTGTGCAGCCATAGGACCTTATCACTATTGCTGTTCTTCCTTTTGATGATGAAACACATCCTCTATCACTCTTCACCTGTGTCCCTGGCAACTCCCTCAGGTTCACATGGCTTCTCAAACCTTAATTGTCTTGTTCAAGTTCTTGTGGGTCCAAAATAAATCATGGATTTA---GAGAAATTATCACTGTGTCATTCATGCTTGAGTGCTGGCATGGCTAAATAGATAGATAGACACCTTCAAACCAGGGATATGGTTTAGGAAAACCTTACAGTTAGAATAAATTTTGTCTAGGAATGTTCTGTCCAAAAGCACCCAAAGTAATATATTTTTTCCAGACATTG------------TGTAAGGAAATATGCCCACCCA-----TAGTTTT-----TCCATGGATGC-------TTTGCAGTTCA------AACAGATGGAGGAAGGTAGCAGAGGACCTGAGATGAGGGAACACAGTTT-CATTTAAGGATAAAAC-----------CCTCTAAT----AAAAGGCTTTTTCTGAGGTTTCA------TTCTAG----CTTAGCATGATCA--------TTTTGTGTACTAAAAATAAACAGAGA---TTATGCATAGCTAGGATTTGGGCCGGGGGAGGGAAT--CAGCCTCTCTCTTCACCCTTCTCTTTCCACTTACTCCCTTTGAGTTTTTTTCTTTTAATTTTAGGTATGCCAAAAAAGTAAGGTTTTCAGGAGTGTAA-CAATTATGGATTTTAGGCACCAC-AATGTTTTCTTCGGGTCCACACAAACACACACACATATACCCTTCCATATTTCCTTACCATGGCTAAAGCACAAATGCAGTATTTTTCACAGAACTGATGCTATTTTTAGACTGAATTGTAGGAAGTCTGCAGCATTAATAAATAGACAAGAAGCACAGAGCCATTGCGCATGGTGATATGCCAATGCAAAAGCTAGCTTGGCCTTTAACCAATGAACTGTGGTTAGATGTTGCAACAACAAAAGTAAAAGCACCGCTTACAAAGGAATGATTAATAAGCTGACAAACTT-CAGGCATTTATTTCCTATTCTTTCGTGCCAGCTATATTAACACTAGCATATTTTCAACTTTATTAGTAAAGTCTTAGAGTCTGGTACTCTTAGGTGTG chr4 - 94230402 14933759 14933758 14935077 79295326 79295325 79296644 1319 TCTGAATTCCT-TAATAACCCACCATCACAGTCAGCCCAAACAGTATCTTTAGGAAACAGCATAGGAAAAGTCTATTTCCCCATTTGCCATCTCCCATCACTATCATGTGTGATGCTGTTGCATGACATTTCCTTCCTCTCTATTTCTCTAAA-GGCAAACAA-GCCGTATTCAGCAGTTCTGAGTCAAATCCTAACACCTGATATTTCTGATATGCAAACTGTTAGCTTTTTCTATTTGTGCAACAATGAGACCTTATCAGTTTTGCTGCTTTTCATTTTGACTATGAGACGCATCCACTATCACTCGTCACCTATGTCCCCGGCAGCTCCCTTAGGTTCAGATGGAAACCGGTACGCTGTTTGTCTTGTTCACACTGCCGCTGATCCAAAGCAAATCACAGCGTTATAAGAAAGATCAAGAGCAGGGGGACCGCATTTGAATGCTGGCAGTTTTTAGCAGGCAGCTATAT----------------TACAACTTGGAAA-----TAAGTTCAGAGATGTTTTTGCGGTGAAATGCTCTGC----AGACGGCAAATGC------TGCCTTCGAGATACTGACAGCAGAACAATAGGAGAGGTTACGCCTGGCCAAAACGCAGTCCTGAAAACGCAGGGGTGCAGCTGAAGTTTTAGTTCAGCACGTAATGTTTTGAGGACGCT-TCAAAACGTGTCACACATGAGGACACCCTTTGTAGTACAAAACAAAACATCGCTACGTGCCTTTCGTTTCGCAAATTCGCTTTCTTACATTGCACATTACTTTCAGGTTTCCTCGTATGAGAAATCGGCTTTCCTTCGTACAATAGATACACAACCACATTCACACATACT-----------------GAGGCAATACCACCAATATGATTCATCCTTC-----CGACTAACGCGTACGTAGCAACTCTAATCTTATTTACAACCTTGCAAAAATGAAGCTTTTTCCAGAGTATAAGCAGCGA--GCTCTTCTGTGTCATGAATCCGTTCCCCG--TCCACATAAA-------------ATCCT--CTTGTTTCTATTCTGCAGCTCAAGCACAAATGCAGTGTTTTTCACATTACCAGTTCTATTTTTAGCCTGAATTGTAGGAAGTCTGCAGCATTAATAAATGGAAGAGAGGTACAGAACTGCACCGCATGGTAATGTGCCAGTGCCAAAGCTAGCTTGGCCATTAGCCAATGAACTGTGGTTAGATGTTAGAGCAACGAAAGTAAAAACACCACTTATAATGGAATGATTAATAAGCTGACAAACTTCCACGTATTTGTTTCATACTTTCTGATGCCAACCTTATTAATACTAACATAGTTTCTATTTTATTAGCAGTATCTCTCAGCCTGAAACATACATATGTG ..:x.:.....-.::..x::.x.::....xx.::x:..x.:..........x:.......-----....x:x.x.....:.xx.:.:.......:.x....x...........x.x..xx.x..................:x...:...:...-.........-::xx.......x.......x:........:...........:x:......x......::..x:....:............:.x..::..........x.x......:.:...x......:x....:..:.....x.........x......:......:....:......:.......x....xxx.:x:x..x:.:x............x::.x::.:x.:......::......::.xx...---..:.:..:.xx.x::x.xx:x:.::::....:........xxx:.x.::..::..x..x.:----------------..::::..:.:..-----..x:x.:...:xx:x.....:xxx.:....:....:----.::.:x.x..x.:------.x::...x...:.:..------------.:x:..:::x..:...::x...-----:...::.-----:x..x..:...-------x..x:......------..::xx.x.....x.x.-x..:.:x::x.x.x.::x.:.:....xx...-:.x.xx.::.:.....-----------...:.x:.----x...xx.x:.....x.x:..x..------..::..----.:.x.:....xx.--------.::.x:....x.x.:...x...:xx.---.:.::....x:-----------------....x...--..x.xx:x:xx....:.....-----.x...x..x.x:x:xx..:xx:.:.xx.:.x....xx:::x.xx......x.x.:xx.....x:....:...-..::x.--.x.:..xx.:::..:-...x:x...::..--......:...-------------.:...--.x.:....:x.x.::::...x...............:.........xx..:::.x..........x.................................:..x:...:.:.....:.:::xx........:..:.....:...x...............x...:.......................:x.:....:.........:....:....:..x..........................-..x.:....:....x..:.:.:.x:.....:.:x......:....:....x....x.:........:.:x:...:xx..:...:x..x:x:.x:.... 11M1D48M5I88M1D9M1D244M3I61M16D13M5D36M4D13M6D16M12I22M5I7M5I11M7I11M6I17M1D31M1I16M11I8M4I23M6I6M4I13M8I26M3I11M17D8M2I21M5D72M1I6M2D15M1I13M2D10M13D5M2D245M1I98M 839/1234 68.0% 1319/94230402 0.0% 161/1234 13.0% 1597536 NA +12484 chr4 + 190214555 16533691 16533690 16534002 312 TGAACAAATGGTTGCTTATGTAAAAGACCT-GCCCTCCAGTAAAATTCCATTTTGGGGTTGCATAAAAACAACAATTCCTGGAAAGGTGAAATTTTTAATTAAATGTATTCAAAGGGAATACAGATTAATGCCTCTAAGCAAGAGAGTATTTAATGCTTCCAGGC-CAGTTCATGCCTACCGAAGTAAAA----ATCTTCAT-----GCCAGTGAGGCTTTTAAGTATTGATATTTCCTGCATTAATAATACTCT--AAACCACATTCATAATAATATAATTAGCAATACAATTCATACCATACAGCATGTGAGGACTCTGCATT chr4 - 94230402 14935447 14935446 14935765 79294638 79294637 79294956 319 TGGACAGATGGATGTTTATATAAAAGACCTTGTGCCTCAATAAAATTCCATCTCAGGGTTATATAAACGCAGCAATTACCGGAAAATTGAACTTTTTAATTAAACATATTCAAAGAAAGTAGGGATTAATGACTTTAAAGTAGAGAGCATTTAATGCTTACATTCATAGATCAT--CCACTATAGCGAAGCTGTATTATCACAATCAGCCACTGATGCTTTTAAGTATTGATA--CCGTGTGTTAATGATGCTTTAAAAACTGTCTTCGTAAGAATATAATTAGTAACACAACTAGCA-TATACTACACCTAAAG-CTCTGCATT ..:...:....x..:....:..........-.:x.::..:...........:.::.....::.....x:..:.....x.:.....:x....x............::.........::.:..x:........x..:...:xx......:...........x..xx.-:..x....--.:..::x..::..:----..:x...:-----....x...x.................--:.x..::.....:..:..:.--....:::x...:...x...........:..:....:.x::.-:....x:..:x.:.:.-......... 30M1I134M1I8M2D14M4I8M5I26M2D20M2I41M1D16M1D9M 227/306 74.2% 319/94230402 0.0% 19/306 6.2% 1598244 NA +10545 chr4 + 190214555 16545598 16545597 16545877 280 TATTCACCAGCAAAG-TATTTTTGATACCCTCATGGGGACAATGATTTGCCAAAAATTCATGCAACTTTTTTTATATTAATGCAGGAAAACTTGAAGATTATTAAGTCCATGCTTCTGACAGCCCCTGCAGTTACAAATAAAATAGCTAATGAGAAGAAAAACTGCCCCTACCGGCTTATTCCCAAAGCCCCAGCCATCTTTACGCAAGAATGCTGTGACAAATGGTACTTTTCACATTTCTA-ACATGCCCCTTCTCCGATTATAGATGTAGATGGATAAC chr4 - 94230402 14945369 14945368 14945645 79284758 79284757 79285034 277 TGTTCATCGCCAAAGGCATTTTCTTCACAACTATGACTTCTAAGATATTCTATAGATTCAAGAAGCTTATTT---ATTAACACGCAGATTGCCGAGTGTTATTAAATGCATGCTTCTGACAGCCCCTGCAGATATGAATAAAGTAGCTAATGAGAAGAAAAATTGCCCATATTGCCGTATTCCCAAAGCACAAATCATCCTTAAGCTAGATTGTGATGACAAATGGTG-TTTTCACCTTTGTATACAT-CACCTTCCACGATTACATATACTGATGAATAGC .:....:.:x.....-:.....:xx:..xx::...:xxx.x.x...x.x.:.x.:.....x.x.:...x...---.....::.:x::.xxx::..:x:.......:.x.......................x..::......:...................:.....x..::.x.x............x.x.::....:...x..x...x..:x:...........:-.......x...x..-....-.x.....:x......:.x..::x....:...:. 15M1I56M3D153M1D14M1I4M1D33M 197/275 71.6% 277/94230402 0.0% 7/275 2.5% 1600229 NA +3311 chr4 + 190214555 16547886 16547885 16547984 99 TTCTTTATTTTTAAATAA-------ATTTAAAAATTTACAAACAT----TCATTTGGAACTCTCCTGGTTCTTTTTTTTTGTTTGTTTTTTGTTTTTTTTTCCAGACAGA chr4 - 94230402 37883926 37883925 37884033 56346370 56346369 56346477 108 TTTCTTACTGATAAATAATAATTTCATATCAAAAT--ACAGACATAGAATTGACTGAAAATCTTCAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTCCCAACAGA ..::...:.xx.......-------..x.x.....--...:....----.::x:..:..x...:.x....:.......x.xx.....x.......x.......x:..... 18M7I10M2D8M4I61M 73/97 75.3% 108/94230402 0.0% 13/97 13.4% -21336040 -72894362 +3370 chr4 + 190214555 16547927 16547926 16547979 53 TTTGGAACTCTCCTGGTTCTTTTTTTTTGTTTGTTTTTTGTTTTTTTTTCCAG chr4 - 94230402 89306820 89306819 89306872 4923531 4923530 4923583 53 TTTGTGGCTCTCCTGGTTCTTTTTGTTTGTTTGACTTTTGTTTGTTTTTTTGG ....x::.................x........x:........x.....:::. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -72758893 -21471509 +3369 chr4 + 190214555 16553465 16553464 16553524 60 AAATAGGATATTTTTATTGTCTCCATTTTACAGGTGAGAAAACTGAGGCATGGAGAGGTT chr4 - 94230402 10729184 10729183 10729243 83501160 83501159 83501219 60 AGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTT .::....xx...x:...::x................:.............::x.x..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 5824281 NA +3508 chr4 + 190214555 16570743 16570742 16570970 228 TTGGTTAGAGTATTCCAGGCAGTGGGATGATGATGATGACGATGATAATCATAAAATAGCAAA--TATT--TATTGTATGCTTACTATGTGCCAGCTTTATCGTGAACACTTTTCTGGTACTATTTTATTTAATGCTCTCAATTACTCATTGAGATAAGAGGCTATTATTATCCCTGTTTTATTGGTGAGGAAATTGAGGCACAGAAATGGTAGGCAACTGCCCAAGGCTCT chr4 - 94230402 10729053 10729052 10729263 83501140 83501139 83501350 211 TTGGTTTCAGTACTCT------TTAAATAACAACAATCATTATAAGTAAAATAAAGAAGCAAGACTACTAATATTATGTACTCACTCTGAA-------GATCCTGAATA-------AACAGGAATTGATTTAGC-CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ......xx....:..:------.x::..:.::.::..x.:x..:.xx.xx.....:x.....:--..:.--....:.:.:..:...x..x:-------x...x....:.-------:::.xx.x..x.....::-...x....xx.:.xx....:..:.x:::..:...:.x.:.::.....:x....:.:...:.........x.x.x.x..:.:..:.xx..x..:x... 16M6D41M2I4M2I20M7D11M7D18M1D97M 129/207 62.3% 211/94230402 0.0% 25/207 12.1% 5841690 NA +3393 chr4 + 190214555 16581894 16581893 16581991 98 AGAAAAAAAAAAGAAAGACGAAGGAAAGAAGAAAGAAAGAAAGAAAGGAAGGGAGGGAGGGAAATAAAAGAAAGAAGGAAGGAAGGAAGGGAAGGAAG chr4 - 94230402 44147019 44147018 44147116 50083287 50083286 50083384 98 AGAAATAAAGAAAAAAGACAATGGAAAATGAAGAGCCATGGGGGAAGGGCTGGGGGGAAGGGAATCTAATAAAGAAGAAAATAGCAACAAGGAGGAGG .....x...:..:......:.x.....:x::.:..xx.x:::.:....:xx..:....:..:...xx..x.......:..:x.:x:.x::.:....:. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% -27565125 -66665277 +3071 chr4 + 190214555 16581929 16581928 16582008 80 AAAGAAAGAAAGGAAGGGAGGGAGGGAAATAAAAGAAAGAAGGAAGGAAGGAAGGGAAGGAAGGGAAGGAAGGGAAGGAA chr4 - 94230402 7739259 7739258 7739338 86491065 86491064 86491144 80 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAA .:..::.:...x::....:...:..:...x..........:::..x.x....:.....xxxx.::..::..:::..::.. 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% 8842670 NA +3142 chr4 + 190214555 16581941 16581940 16582002 62 GAAGGGAGGGAGGGAAATAAAAGAAAGAAGGAAGGA-AGGAAGGGAAGGAAGGGAAGGAAGGG chr4 - 94230402 69066685 69066684 69066747 25163656 25163655 25163718 63 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGG .::.:......:...:.x..............x...-:.....::....:..x.::..x:... 36M1I26M 46/62 74.2% 63/94230402 0.0% 1/62 1.6% -52484744 -41745658 +3274 chr4 + 190214555 16581945 16581944 16582009 65 GGAGGGAGGGAAATAAAAGAAAGAAGGAAGGAAGGAAGGGAAGGAAGGGAAGGAAGGGAAGGAAG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ..:.:.......:x.:.::......:......x...x......:..:..:..x::...x:..::. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -52484740 -41745662 +7677 chr4 + 190214555 16585917 16585916 16586021 105 CTTACCCTGAGGTAGTTGAGGGTGAAGTTTGTTAGCCCCATCCTGGTGATGTTTTTGGACAGCTGATCCAGGACCTGAGGATCTTGTGCCTAAATGGAAAAAAAA chr4 - 94230402 14957791 14957790 14957895 79272508 79272507 79272612 105 CTTACCCTGAGGTAGTTGAGGGTGAAGTTTGTCAGACCCATTCGAGTGATGTTTTTGGACAGCTGCTCCAGCACCTGAGGGTCTTGTGCCTAAACAACAGAGAGA ................................:..x.....:.x:....................x.....x........:.............:::x.:.:.:. 105M 90/105 85.7% 105/94230402 0.0% 0/105 0.0% 1628126 NA +3221 chr4 + 190214555 16586470 16586469 16586529 60 TTGCCACTGTCTTGAAATACACACACACACACACACACACACACACACACACACACAAAA chr4 - 94230402 56248423 56248422 56248482 37981921 37981920 37981980 60 TTGTCACTGTTTGAAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAA ...:......:.x:..::.x.x...x...............:.....x...xxx...... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -39661953 -54568449 +12214 chr4 + 190214555 16588473 16588472 16588838 366 CAAAATAATAAAATATAAAAAATAGTCTCACAATGTACCAATCTTGGAAACAAAAAGGGGAGA--AAAGGGCCTGTGGATTAAAACCGTTGAGAACAAAACTCAATATTTAGAGTTAATTACCTAAAGCGTGACAACTACTGGAATTCTTTCACAGAGAGAGGACTGGGTTTTTCCCCTTGAGTGAAATGAAGGAGGAAAAAAAAGAAAAGAAAGCAAAACAGAAATTAAATTACTTACATGCATGGCTAGGATGCTTCTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTGGAA chr4 - 94230402 14959279 14959278 14959606 79270797 79270796 79271124 328 CAAAATGAAAATACAGCAACAGTGGCA--ACAATAAAGCACT----GAGATAGGAAGGAGCAATGAAGGAACTTGTAAATGGATGTAGTTGCAGGCAAAAGAAAATATTTATAGTTAATTGCCTTGGGTGTGAAATTTGCTGGAGTTCTTC-------ATAAACCTAATCTCATCTCTTTGCATTAGGTCAAGTGAAATAAGGA---------------------------TTACTTACATGCATGGCTAGAATGCTGCGTGGGACTAATTCTCTGTATTGTCTAATAGTAAAGTGCCATGTTTTTATTCTCATAAGATCATCAAAAGTAAACTCCAAGATAAGACGTCCTTCTGTGCATACCTAGAA ......:.x..x.:.xx..x.:.:.:x--.....:x.x..x.----..:.:.::....:.x:.--..:.::.:...::..x:.x::x....x:::.....xxx........x........:...x::.:....x.x:.:.....:.....:-------.x.::x..::x:.:x..:.:...x:.x.::.x...x:::.x..::.---------------------------....................:.....x.x:........:....x............:.................x........:...........:..:...........x..x.xx........:.......:... 27M2D13M4D17M2I86M7D46M27D137M 231/326 70.9% 328/94230402 0.0% 42/326 12.9% 1629194 NA +31860 chr4 + 190214555 16591680 16591679 16592239 560 GATTTGTTTTACATGCAACAGCCAGCAAATGGAATGGAGGCAAATAAGAAAAAATATATATGTATTTCCTATTCAGAAATGGTAAAAAAACAGGCATAGCCTATAAAAGGGAATTAACATCTTCTCTCTTCAGAAAAATTCTGTGCATTCCTCTTAATCAATACAATTAATGTAGCTTTTATCTGAAGTCGGCCTTTTTTTT----------------TTTTAAAGCTGCCTTTCACTTGGAATCCAAAA--TCAAAAGGGTCCCCAATTAAGAAAACATTTTCTGTTGTGCTGAATTCATGTTACCGTACTGTGAGCTCTGACATTTTGTTTCTGTGGTAACCAAAATCAGCTGATTAGTTGGCATGGCAACAGAAAAGATGTAATCCCAGCAGACACACTCTAATCAATGCCCCCAGTACAGATGGTCTCCGGAGGATCAACAAGAAAGAGGCTGGCAGGCATTCAGCCGATCACGTGCTAGCTTGAGACTAGGCCAGGAACAAGAAAACTAAAAAAGAACATTTCTCAAACTAACCAGTAGCTTTTTAACCCTTTTCTTTCTTTGGCTAATTGTA chr4 - 94230402 14961200 14961199 14961759 79268644 79268643 79269203 560 GACTTGTTTTATGCACTAGCATTAACAAATT---------CTAATAGAAAAACTGAAACGCATACCTCATATC--ACAGTGGTAAAAATTTATACAT--CTTATAAA--GGAATTTAATTTCCTTATGTGGAGCAGAATTTTACACACTGCTTTTAATCAATAAAATCGGTGCAGTTCTTATTTTAAATGGGCCttttttttcttttcttttttttttttttAATGCTACCTTTTACATAGAGTCCAAAAAATCAAAAGGGTCTCCAATTAAGAAAACATTTTCTGTTGTGCTGAATTCATGTTACCGTACTGTGAGCTCTGACATTTTGTTTCTGTGGTAACCAAAATCAGCTGATTAGTTGGCATGGCAACAGAAAAGATGTAATCCCAGCAGACACACTCTAATCAATGCCCCCAGCACAGATGGTCTCCGGAGGATCAACAAGAAAGAGGCTGGCAGGCATTCAGCATATCACGTGGTTGCTCTAGACTAGGCCAGG---AAAAAAACTAAAAAAGAACGTTTCTCAAACTAACCAATAGCTTTTTAACCCCTTCGCTGCACTTATTAATTGCA ..:........::::.x.xx:::.:.....x---------.x....::....xxx.x.::::..::..x...:--:x.:.........xx:.x:...--.:......--......x.xx.::::.x.x.xx..x.:....:.:::..:.x..:..........x...:::..:..:.:....:.x..:.x............----------------......x...:.....:..x.:..:.......--...........:...........................................................................................................................................................:..................................................xx........x.x...:x.............---..:................:................:..............:..:x:.x.x:.x::......:. 31M9D33M2D22M2D8M2D93M16I32M2I249M3D74M 446/542 82.3% 560/94230402 0.0% 36/542 6.6% 1630480 NA +3116 chr4 + 190214555 16592448 16592447 16592547 100 CATATGCATTATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACAAACACACACATGATCTGATCATTGA chr4 - 94230402 7596399 7596398 7596498 86633905 86633904 86634004 100 CATCTTCATCTTCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCTGGA ...x.x...:x.x......x..::...:.x..:......:.:.:::..:....:.x.:.:.:..x:..:...:..x:.x..:x.x.x:...xx..x.x.. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 8996049 NA +3068 chr4 + 190214555 16592449 16592448 16592523 75 ATATGCATTATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACAA chr4 - 94230402 84339170 84339169 84339244 9891159 9891158 9891233 75 ATTTGAATTATTGATAGAAATGATCATGGATATACATATATAGGTATATAGATATATAAACACACACTGATGCAA ..x..x.....xx...x.x..:xx:..:x.....:.......x:......x.......x........xx.::... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -67746721 -26483681 +3049 chr4 + 190214555 16592457 16592456 16592518 62 TATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACA chr4 - 94230402 37363042 37363041 37363103 56867300 56867299 56867361 62 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .:.......x.:......:..::.:.x......xx:.:.....:.:...::.:x........ 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -20770585 -73459817 +3215 chr4 + 190214555 16592457 16592456 16592522 66 TATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACA chr4 - 94230402 8395795 8395794 8395860 85834543 85834542 85834608 66 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ...:::.:....x.:..:...x..:....:...::x..:..xx...:.:.............x... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 8196662 NA +3518 chr4 + 190214555 16592457 16592456 16592535 79 TATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACAAACACACACATGA chr4 - 94230402 8395789 8395788 8395867 85834536 85834535 85834614 79 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .:.:::..::.:.::...x.:..:...x..:....:...::x..:..xx.:...............x.x.....x.... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 8196668 NA +3629 chr4 + 190214555 16592457 16592456 16592528 72 TATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACAAACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.::..:::.::...x.:..:...x..:....:...::x..:..xx...................:..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 8196666 NA +3359 chr4 + 190214555 16592458 16592457 16592532 75 ATACATACATATATATATATATATATATATATATATATATATATATATACACACACACACACACAAACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:::.::..:.:.::...x.:..:...x..:....:...::x..:..xx.:.............x...x..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 8196670 NA +3095 chr4 + 190214555 16592471 16592470 16592521 51 TATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -71554709 -22675693 +15033 chr4 + 190214555 16595688 16595687 16595894 207 GAGCCTGTCCTGT-ACCTTGGTAAACATGGGCTTCCCGTGCTGGGTGACCATGGTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTTTCGAGTGTTTGAGAATGTAATACAGGTCGGTCACCCCTCCTTCAAACACAGTGCTAAAGTAACGGGGGATGAGGGTCCTGCCGATAGCTGGGAGAGAAACACAGAG chr4 - 94230402 14964164 14964163 14964371 79266032 79266031 79266239 208 GAGTCTTCCCTGTTACCTTGGTAAACATGGGTTTTCCATGCTGAGTGACCATGGTGCATTGATCACAGTCCACTGTGATGGATGAGTTGTGGTATGACTCTTTTGAGTGCTTGAGAATGTAATACAGGTCTGTTACACCTCCTTCAAAGACAGTGCTAAAATAACGAGGAATGAGGGTCCTTCCAATTGCTGTGAGGAAAATACAAAG ...:..x:.....-.................:..:..:.....:...........:..:..:..:........:.............................:.....:....................x..:..x...........x...........:.....:..:...........x..:..x....x...::...:...:.. 13M1I194M 178/207 86.0% 208/94230402 0.0% 1/207 0.5% 1631524 NA +14049 chr4 + 190214555 16617052 16617051 16617465 414 AGAGGGAACATTTTAACAGCATGGGTTTATGGCAACCGTAAAGAAGGAAGTTGGAAAGGCAAAGCCG-GACGTGATCCCCAGTTTTATAACAAACTCCTGTCAAAACATAACAAACCCCAGCCAGACATGAGCTGCAG-TGACAGAATGCAAGACCATAAAGATGATGGAGATCAGATGGGACAGGCACTTTATAGAAACAAACACCTTCCTTGCAAACAGATAGGGCGAGTGGAATACTGAAAACCCTCCCCGGGAAAAAAAAAATGGTAGGAAGAAATAAGAACAAAAACATAAAATTCAAATGACAGCCCAGCCCAAG---GAGATAAACTCGAGGCAGACAATCCAATTTTACTAAATCAAGTCGACATCT-CCTCCTGACCTTAATTGACC-------ACAGTAAGCTGGATCCTGAACAAA chr4 - 94230402 14972592 14972591 14973010 79257393 79257392 79257811 419 AGAAAGACCATTTCAGTTAACTTTGTTCA--ACAACTGCAATGAAGAAAGTTTTAAGGGCAGAGCAAAGAGGTTATTCACAGCTGTATGACAAACCACTGTCAAAATATAACAAACCACAACCAAACTCAAGCAGAAAATGACAAAATGTAAGACCGTAAAAATGATGGAAATTGTGCAGGACAGGCATTTTAGATGAACAAATGCAATCTGTACCAGCATAAAGGACCAGCACAACACAGAAAATGATACCCAGG------AAAGTCGTCTGAAGAAGTAAAGGCAAAAACATAAAATTCAAATGACAGGACACCAAAAGGAAGAGACAAAAAGCAGGCAAAACATCCAGTTGTATTAAATCAAGCACACTTCTGACCCCTGACTTCACATGACCTACTAGAATACTAAACATGGCATTAAACAAA ...::..x.....:.::x:xx.xx...:.--:....:.:..x....:.....xx..:....:...x:-..x..x..:.x...:.x...:......:x.........:..........x..:...:..x::...x.x.:-.....:....:......:....:........:..::x:::.........:....x.x:......::.xx..:x.:.x.:..x.x...:.x..::x..:..x.....:xx.x...:..------...:.x..xx......:...:::.........................xx..x.xx...---....:...xxxx.....:.xx.....:..x..:.........:xx..x...-x.:......:.:.xx.....-------.:.x...:.xx.::x:.:...... 29M2D36M1I70M1I117M6D59M3I51M1I20M7I24M 281/406 69.2% 419/94230402 0.0% 21/406 5.2% 1644460 NA +7615 chr4 + 190214555 16619547 16619546 16619945 399 CATTATAGTGGAGACTTTGCATGATGAATTTGTTGAAGATGAGGGATTTGCAGCAATCCAA--GGAGGTA--------ATTCCCAGAGCCACCAGGCCATCGTAAGCATG---GCCTTGATAACCAGGGTGATCATTCGTGCAATTTCAGGCTGTGGATTTATGAACAATATCTCACCAGTGGATAATATCGGTTGTCAAGTGT----ATGTTTTATTACCCCTAGAACTCCCTTTTGTCTTTGCAAGTTGCTAGTGGATATCTCTGTTTTTTTTTTTTTTTCTCCTGGCTTCACAGAAATTTGGAAGGGGTTTATTTTATTTTTCTTCTTTTACCAGAGAAGTTAAT----ATTAATAGTAAGGAAAATTAAAAAGAATAAAATAAAGATAGCAGATAAAA-CATTATGAATA------ACCATTT chr4 - 94230402 14974389 14974388 14974785 79255618 79255617 79256014 397 CAGCATGGTGGGGAGAGTGTCTGGACAACTGGTGGGAGGTGAGGGGTT-ACAGGGATATGATAAAAGATACACGAGGCATTCTCGAAACCCTGAAACTGCACTGATCACATGTGGATTGATAGCCAGCATGATTTTTCTGGTAATTTTATGCTGCAGACGTATGAACAATATCTCACCAGTGGATAATATCAGTTGTCGGTTATATACATGTTTTATAACAACCAGAACACTCTT---TCTCAAAGAGCCGTCGGTGGTTAGCTTTGATTTCCTTTTTTTCT-----------GCAGCAA---------AGCTTGCTTTCCCACTC-TCTTTTACTTTA-AAGCTAATGGAAGCTAACTGCAGAGAAAGTAAAAAGGTAT----TCAACATGTTAGACACAATCATTAGGAAAATATTCTACCATTT ..x:..:....:..xxx..:x..:xx..:.x..x.:..:......:..-:...x:..x::.--::..:..--------....:.::.:..x:x.::.:::xx.:.x..::---.xx......:....x:....:x...xx.:.....:.x....::..:x...............................:......::x.:.----.........x..xx.:.....x.:...---...:x:x:..::.:::....x..x..:..x...::.......:.-----------:...x..---------:.:..::...x::x:..-........:xx.-...:....----::...:x.:.::....:.x....:.x..----.x..x..:x:...:.x..-.....x...x.------....... 48M1D12M2I7M8I32M3I91M4I27M3D44M11D7M9D17M1D12M1D8M4I28M4D18M1I11M6I7M 245/369 66.4% 397/94230402 0.0% 58/369 15.7% 1645158 NA +25930 chr4 + 190214555 16652776 16652775 16653165 390 CAGTTGATTATATTCAGTCATTCACGCAGCTCCCCCGAGGACAGGATTTTTATTTTTAGAGAAGCCTCCATTTGCTGACTGTCGTGAAGGGAACACTCAGGAGGAGCTATTAGCAGTCACTTGTTTCAGTAAACACTGAATATAACATATGCCTCTCAAGTAATGTGTATCCAAACATACAATTTACAAATAATTAACATCATGTTAATTAGTCACATTAATTTATGCCACTTTGTGGAATTATTTCCTCAGAGTGTTTAGGAACGCTGCCAGGAGCTTGAGCCAAACAGTGTGAAAATGTGCTTGAAGTTAACTGTTGTGAGTGGCTGTGAAACACAGCTTG---AGCAAGTTGTTGCAGGGGCCCTGCAGCTGATAGA--GCCACCGGGTCTT chr4 - 94230402 14994442 14994441 14994831 79235572 79235571 79235961 390 CATTTCATTGTGTGCTATAGTTCGTGTG--TTCCCTCAGGACACCATTTTTATTTTTAGAGAAGCCTCTATTTGCTGACTGTTGTGAAAGGAACACTCAGGAGATGCGATTAGCAGTCACTTGTTTCAGTAAACATTGAATGTAACATATGCCTCTCAAGTAATGTGTATCCAAACATACAATTTACAAATAATTAACATCATGTTAATTAGTCACATTAATTTATGCCACTTTGTGGAATTATTTCCTCAGAGTCTTTAGGAATGCTGCCAGCAGTTTGAGCCAAAGAGTGTGAAAATTTGCTTGAAG-TAACTGTTGTGACTGGCTGTGACACACAGCTTGAACAGCAAGCAATG--AGGGGCCAAACAACTGACTGAAGATCACCCAGCCTT ..x..x...:.:.x.x:.x:...::.::--.:...:x......xx.......................:.............:.....:..............:x..x...........................:.....:.................................................................................................................x........:........x..:..........x...........x.........-............x.........x..........---......:x:.x--.......xx:..:....:x..--::....x:.:... 28M2D279M1D33M3I11M2D21M2I13M 336/385 87.3% 390/94230402 0.0% 10/385 2.6% 1658334 NA +9840 chr4 + 190214555 16659204 16659203 16659465 262 TGGAAAAGGCCTGAGATGTACTTGGCAGCTTGATCTTTCTGTATTTGGTTTGCAAAGGCTCATTTTCCAGACATGTGTTTTTGCTTAGAAACACACAGAGGTGGATAAATCCCTGGGTCGGCATCCCC--GGAGCCGCTC-CATTAACTTTCTTGGCATGGCCTCACCACTGAAGTCAACATGACTTAAGAGTTTATATAACATTTTATTAGGCTTTAATTCCATACTTTTCCTGAAGTTCAGTGTTCATGCGTTGGGTAGAAAA chr4 - 94230402 15000920 15000919 15001183 79229220 79229219 79229483 264 TGACAAGGGTTTAAAGGAAACTCGGTTGTATTAGCCTTCTTGTCCTGCTTTG-AAAGCCTTCCTCCTTAGACATATGTTTTTGCTTAGAACAAACAAGAGGTGAATAAATCAGCTGATCAGCATTCCCCTAGTGCTGCTTGTATTAACTTCCTTGGCATGAATTCACCACTTAAGTCAATATTACTTAAGAGTTTCTTTAACAGTTTATTCACCTTTAATTCTATGCTGTTCCTGAATCTAAACTTCCACCTACTGAACAGAAAA ..:x..:..::.:.::x:x...:..:x.:x.x.x.:....xxx::..x....-....x..:x:.::::......:...............xx.xxx.......:.......xx:x.:..:....:...--:.x..:...:-:........:.........:x:........x.......:..x............x.x.....x......x:x.........:..:..x........x:.x.::x.:..:x:::..:::...... 52M1D75M2I10M1I124M 178/261 68.2% 264/94230402 0.0% 4/261 1.5% 1658284 NA +6249 chr4 + 190214555 16672499 16672498 16672682 184 GCCCTTACTTTCTTGTGTTCTAGTTTCTTTTTTAAACTATACTACTGGGAAAGACTACAAGACTTTCTTGCTCCTTATTAAAAACAGAAAATCTGTTTAGGCAGCAGCTACAGCACAAA---------GGCAGATAGATATATTATGGGCAAAAAAGAGCCAAACTACAGGCAG-GCCAACATCAATGGAAACA chr4 - 94230402 15006637 15006636 15006823 79223580 79223579 79223766 187 GCCCTTGTTTGCCTCATTTCTTGTTTCTCTCTTAAACTGCACCACTGGGATGAGCCACAAGACTTCCCTTCCCCTTATTAAAAAAGCAAAAACTGCTTATGCAGCAACTGCAGCAGGGCTCTGTTGTTAGCAGATAGTAAGGATGTATGGAGAAGAG-------CTACAAACGGTATCCACATCAGTGCAGACA ......::..x.:.xxx....x......:.:.......::..:.......x:::.:.........:.:.x.:............x:x....x...:...x......:..:.....x::x---------:........xx.x:x.:.:x.x.:..:..-------.....::.:.-::.x......:..x.:... 119M9I29M7D10M1I19M 122/177 68.9% 187/94230402 0.0% 17/177 9.6% 1665862 NA +3415 chr4 + 190214555 16672882 16672881 16672995 114 TTCCTTTTTTTTCCTTCCCCCTCTC---CTTATCTTTTTTCTCTTCCTTCTCGCTTCTCTCCCTC--CTTCTCTCTTTTTCCTTTCTCCCTCCCTCCATCCTTTCCTTCTTTCCCTTCC chr4 - 94230402 81583171 81583170 81583286 12647117 12647116 12647232 116 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTT---TCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTTCC ...::.......::..:......x.---...:..:.x...---.:..x.:.:xx..:.....:.:--:....::.:x..xx:....:.:..:..:..x:....x.x...x..x...... 25M3I12M3D22M2I52M 75/111 67.6% 116/94230402 0.0% 8/111 7.2% -64910289 -29320113 +3123 chr4 + 190214555 16672913 16672912 16672965 53 TTTTTTCTCTTCCTTCTCGCTTCTCTCCCTCCTTCTCTCTTTTTCCTTTCTCC chr4 - 94230402 91625188 91625187 91625240 2605163 2605162 2605215 53 TTTTTCTTTTTTTTTCCCTCCCCCCTCTCTCCATCTCACTTTTTCCTTTCTCC .....::.:..::...:.x.::.:...:....x....x............... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -74952275 -19278127 +3295 chr4 + 190214555 16675418 16675417 16675508 91 ACTTCAATTGATTCATTGAGGGTCATCTCTATGCCAGCCACTTTTATTTAAAAAAAGAAAGAAAGAAACAGAAAGAATACACAGCCCCTGC chr4 - 94230402 30090755 30090754 30090843 64139560 64139559 64139648 89 ACCTGAACTGAAAAATTAAGAATAACTTTAATGT--GACACTTTCATTAAAAAAAAGAAAGAAAAAAAAAAGGAAAATACATAGAAGCTGC ..:.x..:...xxx...:..::.x.::.:x...:--.x......:...x...............:...x.:::.:......:..xxx.... 34M2D55M 61/89 68.5% 89/94230402 0.0% 2/89 2.2% -13415337 -80815065 +3270 chr4 + 190214555 16679282 16679281 16679375 94 AGTGAGAGAAGAAAGGAGGAGGAGAGGGAGGAAGGAA----GGAAGGAAGGCAGGAAGGCAGGAAGGAAGGGAGGAAATCTTTTCTGAGTTGACAGTA chr4 - 94230402 25605783 25605782 25605880 68624523 68624522 68624620 98 AATGGTAAATAAACAGAAGTGAAAATGAAGGTAGGAAAATGGAAATGAAGGTAGGAAAATGGAAATGAAGGTAGGAAAACTTGTCTGTATTTACATTA .:..:x.:.x:..x:..:.x.:.:.x.:...x.....----.:..x.....:.....::::.:..x.....x......x...x....x:..x...x.. 37M4I57M 63/94 67.0% 98/94230402 0.0% 4/94 4.3% -8926501 -85303901 +3196 chr4 + 190214555 16685357 16685356 16685405 49 TTTTACATCTCTCAAGTTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT chr4 - 94230402 65759174 65759173 65759222 28471181 28471180 28471229 49 TTTAACATTTCCAGGTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT ...x....:..:x::xx................................ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -49073817 -45156585 +3039 chr4 + 190214555 16685373 16685372 16685413 41 TTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTGTTTTGTT chr4 - 94230402 23073762 23073761 23073802 71156601 71156600 71156641 41 TTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTTT ......:.............x........x........x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -6388389 -87842013 +7116 chr4 + 190214555 16692415 16692414 16692776 362 TCTAAAATCTGCCAGCAGCAGCAAAAGGGTTACTTCCAACTTCACCTTGGAAAGTAGCGATGTACAGGTACT---GGTGCCCTGAACATGTAATATTTATATCAGTCATACAAGTTTAATTTT-TTTCTTTTCTGTGGAAAGAAAAAA---------TACTTTTTTTTTCCTCTTCTTTTTTGGTAAAGCTCTGCACTGCAGGGGGAAGAAATAAAAAGAACCTCTTCAAGTTTGGAATTTTCCACTCCCCACACCCCCTCAAGCTGGTCAGAGGAGCATAGCAGGAGAGACAGAGCCAGGAAGAAAAATGCAGATATGATGATTTGTCTTGGTGAGTCTCAGAAACCATTCGCAGTCCATGAGGCTGAGTTGAC chr4 - 94230402 15013080 15013079 15013423 79216980 79216979 79217323 344 TCCAAAATC--ATGGTATCTATAAAAGGGTTAATTCAAAAACACCCTCAGAAACCAGAGAACTCCAGGTACTCTTGATACCCTGAGCATGTAATATTTATAACAGTCATACAACTTTAATTTTACTTCTTTGCCTTAGAAAAAAAAAAAAAAAAGAGTGCAATTTTTCT-----------------AAGCACAGCACTGCA--GAACAGAAATGAAGCG---CTCGTT-AGTTTGGAATTTTCCATTCCT--TTTTGCTTCTGCCTGAAAGGCAGAGGACTGTGGGGGTTTCATAGC--GGAAAGAATTTAGGCTTGTCTCCCTTTGACTT-GCAAATTTCAGAAACAGTGCACTATCCATCTAGCTG-GTTGGC ..:......--x::.:.x.x::..........x...x..xx:xx...::....x:..x..xx.x........---.:.:......:...............x...........x.........-:......x.:x.:....:......---------.:.xx.....:.-----------------....x.x........--.::x......:..:x.---...x.:-................:...:--:x::x.:..x:x...:xx:.x:...x.:x.::..:.xxx..x...--....::..xx.:x:xx.:.xx:xx....x...-.::.:.:........x:.x.:.x:.....xx:....-....:. 9M2D61M3I48M1I24M9I12M17D15M2D16M3D6M1D21M2D45M2D32M1D36M1D6M 225/331 68.0% 344/94230402 0.0% 44/331 13.3% 1679335 NA +17643 chr4 + 190214555 16707457 16707456 16708042 586 ATCATCACTAGTTAAGAC---AATTGGTTGGGACTGTTATTGTCAATAGCAAA-CTAAAATCATTTC--ACGTGATAATTTCGAGGGTTAATTGTTGCAGTTTATTCAATGCAATCTTCTCTACCGGCTTCATTTTTATTTGCCAGTACACCAATATACCATGATTAGCATAAATTAAACTAAGTCAATTCTGTGGGTTACTAAATTATTTTACACCTGTC--TTTTTTTTTTTCTTTTCCTCCCCAAACATTTAAAGGTTAGAGATGGGTGAATGGTTTGATGGCAAATTCCAACATCCAGCTGCTCAGCCTCAGCTCAAAAAAGAAATGCTTAAAATCTGGGTGATTGAT---------TTTCAGAAATCTT--GGGTAGAAAAATACATCG--TGAAAAAATGTCATCACGAAAGA--TGTTGTATCATTATACACTGACCTTTTACAGAGGCCCATGCGACTCACAGCTGGGAAGCAAGGAGCTCTACATGCAAACTTAGATAATACAGAATG----GGAAAGACTTGCGTGTGTGCCTCAAATGAGC--CATTTCCCGTGTTCAAACTGACACACAGTGACCTTGGATGGCTCC-GGTAACATTTGTTCTT chr4 - 94230402 15019769 15019768 15020364 79210039 79210038 79210634 596 ATTATTGACAGCTAACATTCGAATTTGCTGGACTGGTTCTTTTCAATGGCAAAGCTGAACTCACTTCCAGAGTGATAATTTCTAGGGTTAATTGTCATAGCTTCCGCCACGCAATCTTCTCCACCAGCTTTATTTT-ATCTGCCAGAGCACCAATATGCCACGATTAGCATAAATTAAACTAAATAAATTCGGCGGGTTACTATATTATTTTATGCTAATCCATTTATTTATTTATTTT------CAAACATTTCAAGGTTAGGGATGGGTGAGCAGAGTGACGGCAATTCCTACCGGCAGCCTGCTCACGTTCAGCTT-----GGGAGGGCTTCAAAACTTGGTGACTTTTTCTTTTCTCTTTCAGGAGTGTTTAGAGAGGAAAAAAACTCCAGTTTGAAAACTGTCATCAGGCATGAACGGCTCTATCATTACACGCTGACCTTTCACAG----CCGT---ACCCACGGCACAGTACTGCACAACTCAATA-GCAAACAGCAAGAGAGCAAGATGCACCAAGCAAATCTGCCTGCGTGACTCAGATGAGAGGCATTCGTGGTGTTAAAAATGATACAAGACCACCTCTTGCTGCTCCAGGTGATGTTTTTTCCT ..:..::x:..:...x.:---....x.:...:x:x...x..x.....:.....-..:..x...:...--:x...........x............:::..:..x:x.x.:...........:...:....:.....-..:......x:.........:...:.....................:.x.....x.:.........x.........::.:x:..--...x...x...x....------.........x........:.........:::.xx...:.....x.:.:.x.:x.x:x.......xx:......:-----:.:.:x....x...x..x.....:.xx.---------......:.:.x..--.:.x:......x..x:.:--.x:....x........x.x.x..--x.:.x........:..:.........:....----..:.---..:...:..xx:.x.x::x:x.:...x.:.-......xxx:.x.:x:..::...----:::x.:.::...x..:...x....:.....x--....:x:x.....x...x...:...x:::x....:xx::x.....-...:.::...x...:. 18M3I32M1I13M2I67M1D84M2I16M6D74M5D28M9I13M2I18M2I23M2I31M4D4M3D30M1D23M4I31M2I45M1I16M 399/566 70.5% 596/94230402 0.0% 50/566 8.8% 1687688 NA +3102 chr4 + 190214555 16725267 16725266 16725334 68 CACACGCACATATATACATCTGGAGAGAGAGAAAGACAGAGAGAGAGAGAG--ATTGAATATGCCAATAG chr4 - 94230402 67652084 67652083 67652152 26578251 26578250 26578319 69 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGAT-TGCCAAGAG ......:...x.:......x:x:.:.:.:.:.....x..............--...::..-......x.. 51M2I7M1D9M 52/67 77.6% 69/94230402 0.0% 3/67 4.5% -50926817 -43303585 +27864 chr4 + 190214555 16729487 16729486 16729995 509 AGAGCAGGAGAGGGAGGAGGGGAATTAACAAATCTTTGAAAAA-----TAAAGCTGCATAATCTGCTATATTTCAGGCCGCTTTTATCCTCCAAATCCCCCATCTTTGTTTAAGCTACAAACAGACTCTATAAAAATCAGCTCACTGGCCTCTTCC--TATTATACACCTCCCTGCACAAATCAAATGAAGCTTTGGCTGAAAAGCTGATAAAGAAAAAATACACCGACACATGAGCAAGCTGATGTATTTTAAAAGTGGTTATCATTTCTGATCCTTTCCTTTCTCTCCAGGGAATAGATCGTCTTTCTAAGGAGCACACAAAACTCTGGCACTGAGCACACTTCACCCCTTGCATTTGTTTTGATTAGGGGTTTTCTAAAATAACGACCGCATGAAGTGTTCCATCATTAGCATTGATTTTTAACACCTTGGG--TATGAGTCGTTGTCGTGTAACTGTTTAATATTAGGGCATAACCAAGACCCCCTC---CTATTATTTGC--TCTCACCATACAGTTT chr4 - 94230402 15026088 15026087 15026600 79203803 79203802 79204315 513 AGACCGTGGGGGTGGGGGGGGGAATTTACAAATCTTTGAAAAAAAACCCAAAGCTGCATAATCTGCTGTATTTCAGTTGGTCTTTATCCGCAAAATCCCAGATCTTTGTTTAAGCTACAAACGGACT--ATAAAAATCAGCTCGCTGGCCTCTCTCCTTATTATCCACATCCCTGCACAAATCAAATGAAGCTTTTGCTGTAAAGCTGATAAA----AAACACGGCG-CACATGAGCAAGCTGATGTATTTAAAAAGTGGTTATCGTTTCTAATCCTTTCCTCTCTCTCCAGGGAATA--TCATCTTTCCAAGGAACACACAAAACTCCACCACTGAGCACACATCAGCACTTACACTTGTTTTGATTAGGGATTTTCTAAAATAACAATGAC-CGAAGCACTCCAGCGTTATCATTGATTTTTAGCACCTGGGGACCCGGTGTGACAGTCGTGCAATTGTTTAAAATCAGTGAGTAGCCCAGACCGGTTCTGACAAATATTTGCAATCCCATAATCTATTTT ...x.:x.:.:.x.:..:........x................-----:..................:........x:x.::.......x.x.......xx.....................:....--..............:.........::.--......x...x..........................x....x............----...:..:x..-.......................x.............:.....:..........:...............--..:......:.....:............::x............x...x.x...:..:...............:..............:.:x:.-:....:::....x.:...x............:.....x...--:xx.x..x::x......:..:.......x..:..x.x:..:..x.....xx:..---.x.x.......--..:..:x..x:.x... 43M5I79M2D27M2I55M4D10M1D70M2D93M1D41M2I54M3I11M2I16M 411/499 82.4% 513/94230402 0.0% 24/499 4.8% 1703399 NA +4860 chr4 + 190214555 16738496 16738495 16738688 193 AGACTAAAAGCTACCGCTTAGCCTTTACAACTTTTGAAAGTTAACCCTTTGGTACATAAAATTAATTTTTACTTTGCTATACAAAATCCAGATTTATGTATGTCAAATGTGAAGAGACACTTTTGCTTTCACATTTTCTATGAAGACTCTTAAGGCTACCAGAGGCATCCACAG----AGGGAAGTGAAAATCTGGT chr4 - 94230402 15029920 15029919 15030116 79200287 79200286 79200483 197 AGATTAGAAGTAACTTGCAAGGTTTTATTACCTTTGATTTTTAGCTCTGCGCTACGTAAAATTAATTTGTATTTTGCTGTAGAAAACACAGGATTAATGAGGCCAAAGTGGAAGAGAGACTTTTGGCTGTGCAAGTTCCACCAATTCTTCTCAGAACTCAAGCAACACTTTCAGCAAAAGAGAAATAACAGCTTTGT ...:..:...:x..:xx:x..x:....:x..:.....xxx...:.:..x:.x...:............x..:......:..x....:x...:x...xxx.x.:....xxx.......x.......x:.x::..xx...:.:x..xx..::.x..:x:x.x..x::..:::x...----..:...:.:.x.:::.x.. 174M4I19M 118/193 61.1% 197/94230402 0.0% 4/193 2.1% 1708576 NA +3001 chr4 + 190214555 16739591 16739590 16739643 53 TATATATATATATATATATGTATATATACATGTGTGTGTATATATGTATATAT chr4 - 94230402 65232559 65232558 65232611 28997792 28997791 28997844 53 TATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTAT ..........:...:....xx.:xx........:........x.x....:... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -48492968 -45737434 +3076 chr4 + 190214555 16739621 16739620 16739667 47 TGTGTGTGTATATATGTATATATACATATGTGTGTATATATGTATAT chr4 - 94230402 66471244 66471243 66471290 27759113 27759112 27759159 47 TGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT ....:.......:...:.....:..........x.:..x..::.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -49731623 -44498779 +3168 chr4 + 190214555 16742032 16742031 16742097 66 TCTTTTTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTTCTTTTCTTTTT---TTTTTTTTTTTTTGAGAG chr4 - 94230402 88442035 88442034 88442103 5788300 5788299 5788368 69 TCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTTTGAAGG .......x......x...........x::.....:x:.........:.---.x.x:...x......::. 48M3I18M 51/66 77.3% 69/94230402 0.0% 3/66 4.5% -71700003 -22530399 +7812 chr4 + 190214555 16747146 16747145 16747999 854 GTGGACCATTTTCTTAAATAAGGCATGGCGCTGGTCTGACATTAGTTTAACAAGGTAATTATCAAGTGAAAAATAGCTGCTGCACTGCTGTGAACCTGAATAATAACTCTCATAATTACTGATTTTG-GGCCCATC----TTTTAAAAAAATAATAGAGCTCCAAGTACTAAAGCATTTTATAAGAAATACATTCCAGTACAGTGTCTAGAAGTGTGGAGAACTATTAAGGATATAATTAGCGGTTTATT--TACATAATCAGTGAAACACCGTTTATC----ATTTCTTTTATGGTCCTATTGAAGGAAAGC-AAATAAGTATGAGAATT----AAGTTATTTTATGCAGGCAAATTTGAAAAAGAGAATTATTATTAATTGTTTTAAAGCTTGAAAGTTGGACTTTCTAAATGCCTCAAGTGAACACTGAATAAGTATAGTTGAGTTTACCAGATGCTAGTACTTCTCATATATGACATGACAAACATTTCCAGAGGAAATTTTACACGGACAAATACATCTCTCAGCTAGCT------AACTTTAATCTTTTTTTCAAAG-CTTGAATTAATTCTGAAAACACAGACACAAA------TAATTATCCTTTACCTGAGAACCATCTCAGGTGGTTGATTTTTATCTGGAATATCGGAATATGAGAGTAACATGGAGACACCATGTGTGTCTATGAGGAAATACCCT-CCCAAGCATTACTGACTGGGACAAGCTCATAATTAGATTTTGAAAGAACTCTTGTTTTTTCATTGTTTTCAGTGTAACAACCTCATCCTGACATAGCAAATGATGCATTTTTCAAAGTAAA----AAAAGAC---AAACAATCAAACTGCAAATAAGATTATTCAAAGGCAGGAATAAGTCA chr4 - 94230402 15033279 15033278 15034058 79196345 79196344 79197124 780 GCAGATTATTTCTCTTAAAAAGATACAGAGCTGGCTGGACACCAGTTTAACAAGGTAATTATCAAATGAAAGAGAACCACTGTACTGCTGTGAACCTGCACAAAGACTCCTATAATTACTGATATTGTGGCCTATCTTTGTTTTAAAAGAACCACACATTTCAATAT---------TTTTGGATAAGGTATGTTCCGCAGTGATGCCCGAAATAGTAGA-------------------------TTTACTCATATGTGATCAATCAAATACTATCTCTCCTAGACTGCTTTCTGAAT--------AGGAAGGCTATATACGTGTGACATTTCACCAAGTC-TGCTGTACAGGTAACACTGGAA--------CATTAACAATTATGTTA-----TGAAAA--GAA--------------CAAGTTAACGCTTCATGAATA------AGTTTCATAAGCGGTGAGGCTCTGAATACACAGCATAGTG---CTGTTTAAAGATCATTCT-------------TATTCCTCAAATGGCTGTAGACAATGGCAACCCCATGTACACGGTCTTGAGAAGATTACATGAACGCCGGTAGAAATGACAGTAAGCATTTTCTATCTCTGAGAAATCTCA-----TCTTTCCCCCTTTGTATCAGCGCTGCACAGG-------TTGAGGCA-CAGGAGTATAAATCAAAAGCAGTTTTGCCCAGGCACTGTTGTCTTGAA-ATTTTTATAATTAG---TTTACTGGGATGTTATTTTCTCATTGCTTCATTTATAACTAAACTGACTTGAAGTATCACACAGCGCATTTCAAAAAGTATACAGTAAAATACTGATAAAAATCAGGATGTAACTATGATTGTATAAGGAAAAAAGAAAGACA .::..::....:::.x..x...::.::.x.....::x....::......................:.....:.x.:.::...:...............x.:..x:....::............x...-....:...----........:..:x.:.x.x:..x.x:.---------....:x.x:.::..::....:xx::::..:.:::..xx..:..-------------------------....:.--..::.:....:.x...:..::.:.x..----.:.x....:xx::.--------.....:..-.x...x..:...x.x..----....:-.x:.:.:....:..xx:..:..--------:....x:....:.x...-----.....:--.:.--------------.....x...:..xx..:.:..------.....xx:.:::.x.::x:..::xx...:.:::...::::---x.x.::.:..:xx...:.-------------:..::....:x.:...------..:xx:..:.::x.x.x..x:.-.....:xx:...x::x:...:.x.::.x...------...x:..::.:..:..xx..:xx......-----.:xx.::::x.:..x.x:.x..xx::.:::.-------.x...:..-..x.x..:.xx..x.::.:xx::::.-....:...:.::..x..x.:.-.xx:.:........---..x.xx.::x.x..:....:......:..:xxx.:....x.xx:::x.:...x:..x..x.::::......:xx......x.----....x..---x..x.....::x..:..x..x....:.x:..:.:x.::.:x...x.. 127M1I8M4I27M9D43M25D6M2I27M4I14M8D8M1I17M4I5M1D22M8D17M5D6M2D3M14D21M6D40M3D18M13D16M6I22M1I31M6I29M5D31M7D8M1D26M1I21M1D14M3D82M4I7M3I47M 452/743 60.8% 780/94230402 0.0% 148/743 19.9% 1713867 NA +15737 chr4 + 190214555 16757100 16757099 16757522 423 ACAGCATGCCTGGACCTCGAACGGGTTAAGGTACCAGCGCCTGAGCTCAG-AGCGCTGCATAAACAGTGCACGTCAGGCGTTCTAAGCAAGCTTCATCTTCCTTGTCTCT-CAGTCTTGGGCTGTCAATCAGCTGTCACCAGCCCACACATCAGCAGCGTGTGCACATCACCGGGCTGTCAGCAAGGCAGCTGATGAGACTCGGCTCAAGACCGTCAATCATCTTTGTTTCTCTTCTCCACTCGGGAAATATTTTGGCTCGGAGAAACAAAGAGGCCTGGGCAACAATGGCTGGTAGTCAGGCATTTACTCCTGTTCATGGAGATAAGATCTTAAACAGGCGATGATCGTGATTCACTCCCAAATGATGCTGGGGTGGGATGGACAGAGGGAAGAGCCAGAATCTGTTGTATTAGGACATATTTT chr4 - 94230402 15043458 15043457 15043851 79186552 79186551 79186945 394 ACAGTGTCACTCTGCTGTGAAAGAGTTAACTTCCTAGCTCCTATTCTCTGCAGTGCTGCATCAACACTGCACATTATTCTTACTGAGCATGCTTCATCTTTTCTGTCTCCACAGTCTTGGGCTGTCAATCAGCTGTCAGTCCCGACCACATCAGCACAGTGCGCA--TCACCAGGCTGTCAGCACAGCAGCTGATGAGACTCTGCTAAGAGCTGTCAATCAAACTTGTTTCTCTTATCTGTTCTGGAAATATTTTGTCTCTAAGAAACAAAGA-ACCTGGGCAACAATGGATCAGAGTCTAGTATTTACTCTGGTACAGGGATAGGAGGCTCTTAACGGGAAACGAATATGTTTTATCCACAACC----------------------AGGAAA-----AAAATCTGCTACATTAGG-CATAtttt ....::.xx..xx:.:x:...x.:.....xx.x.:...x...:xx...x.-..:.......x....x.....:.:.xx.x.x..:....x..........:::......:-...........................x:xx.xxx..........xx...:...--.....:...........x:................x...x.:::.:........xx:...........x..:::..x............x...x:...........-:...............x.x:x....x:.:........:x..x..x...x.x:..::::.x...:..x:.:..x::..x..:.::.x...x:----------------------...:..-----.:......:.::......-........ 50M1I59M1I54M2D106M1D91M22D6M5D18M1D8M 287/392 73.2% 394/94230402 0.0% 33/392 8.4% 1713642 NA +23216 chr4 + 190214555 16758343 16758342 16758797 455 CCCTCATCATTTCAGTGTTTGTGACAGTGGGGATGTTTTTC-CTCTGATGGATTCTTTCCTAGGTGCAACACTGATTTCTGAAAACACATCTCTCTCTGATCTAACTGGACATTAATTGCTTTTGTGCTGATGCATCTATGCCTCCTGGTCTGATAGCACAACTAGCAAATCTGATCTCTGACAAGTTGGCTGAACCTAATCAGGACAGATCAGCTGTTACCCAAGGTGCCACACGCTGTAATTTGAGGATCTTTACAGAGTTATCACTCGC-CTGAAAGACAAGGAACTATAATTCTGTCAACACTAATCCCAAACTGTATGTTCAAAGCAACTGTGGCCTCCCCACACCCCAAAAAAAGATAGCACTTGTCAAATAAATACCTGAGATAATTGATAAGAGGGGATTAGAAGGATGTGGCTGATACAGTGACAGTAGGAATTATTATTTTTAAGAA chr4 - 94230402 15046786 15046785 15047213 79183190 79183189 79183617 428 CCATCATCA----AGCATTTGCGACAACTGGGATATTTTACTCTTTGACAAATTCTTTCATAAGT--AGCACTGTTTTCCAGTAACAGAACTCCCTCAGATCTAACTGGACATTAATTGCTTTTTTGCTGATGTATCTGTGCCTTCTGGACTGATAACACAACTAGCAAATCTGATATCTGACAAGTCGACTCAACCTAATCAGGACAGATCAGCTGTTACCAACGTTGCTATAGGCTGTAATTTGAGGACCTTTACAGACTTATCACTTGCTCTGAAAGGCAAGAAACTGTAATTCTGTCAGCAGTAACCCCAGAACGTGCATTCAGATAGGCTGTTATTTTTTC-----------------TACAGTTGTCACATAAATACCTGAGATAATTGATAA-AAGGAATTAGAAGTATGTGAGTGATACACTGACAATCGG-----TGACTCTCAAGAA ..x......----..::....:....::x.....:....x.-..:...:::........x..:..--.:.....x....:::x....x.x...:...x..........................x........:....:.....:....x......:...................x..........:.:..x.............................x.x.x...:.:.x...............:.........x........:..-.......:....:....:...........:..x...:....:.x:..:::....:.xx::....x:::.:::.-----------------x:..x......x........................-.:..:........x.....:x.......x.....:.x..-----.x.:.:.:..... 9M4D28M1I23M2D205M1I73M17D36M1D39M5D13M 342/426 80.3% 428/94230402 0.0% 31/426 7.3% 1711557 NA +11691 chr4 + 190214555 16759137 16759136 16759472 336 AAAAATAAACTTCTTTCTTACTGTATCGCTTTGGTCCATCTTCCAAACAAAATGAAAGGGTTAATGTGGCGTCATCTTCAAAAAATTCAGTGGCAAAGGCGTCCCACCAGAGGTTGTCACTATCCTGCAAAGAGACAGATCATTTATTTAACAAG-GGAAAGTGGGAAATA---------TCTCAAAGAGGAAGAGAAAAGGGAAGAGAAAGAAAAACTCAGCTGCTCCTTGCTCATTACTTCGCGTATGTGTGTAGGTGTTCTAGGAAAGGGTAGGTGGGCGGTCACTCTTCAAATTAATTGCCTCAAATAGGAACCAAATTCCAATTCAATAAGTGAGCTCAAA chr4 - 94230402 15048032 15048031 15048348 79182055 79182054 79182371 317 AACAAAAAATGTATCTCTTACTGTATCGCTTTGGTCCATCTTCCAAACAAAAGGAAAGGGTTAAGGTTGCATCATCTTCAAAAAATTCAGTTGCAAAGGCATCCCACCAGAGGTTGTCACTGTCCTAGGAAGTAACAGATCATTCACTTAACAGGAGGCAAAATGAAAATATTTTCATCTTTTTAAAGCAGAAATTCCAAAGGATCACA---CACAGTTTGCATGTCTCCCCCTAATT--------TGGGGGTTTAGATG-TCTATGA---GGTA--------------TTTCAAACTAATTTTCTTAGATAAGGTTCGAGTGTCAATTTAAGGAAAGAGCTGAAA ..x..x...:x.x.:.....................................x...........x..x..:....................x........:....................:....:x:...x:..........:.:......:.-..x..:xx.:.....---------.:.:....x:...:xxxx..:...xx.x.---x.x.::.::xx..:::.::x..x...--------.:x.x..x...:..-....x..---....--------------:......:.....x:..:.:...:.:x:.:.:.x:.....:..x:.:x.....x... 155M1I15M9I29M3D26M8D14M1D7M3D4M14D57M 227/307 73.9% 317/94230402 0.0% 39/307 12.7% 1711105 NA +3096 chr4 + 190214555 16766374 16766373 16766474 101 ATATACACATATATATGTGTGCATTTATATATATACACATATATGTCTATATATAAATGTATGTATGTGTGTGTATATATATACACACACATATATGTGTG chr4 - 94230402 89016082 89016081 89016180 5214223 5214222 5214321 99 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTA--GATGTGTGTGCAGACACTTGCGCACACACGGATGCGTG ..:.:....:..x.:::..::..:x:.::.x.:::....:.:...:xx..::...x.:...--x.........:.x.:.:x.:.:......::x...:... 61M2D38M 60/99 60.6% 99/94230402 0.0% 2/99 2.0% -72249708 -21980694 +3225 chr4 + 190214555 16766462 16766461 16766541 80 ACATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTTTGAGACAGAATCTCGCTCT chr4 - 94230402 83610364 83610363 83610443 10619960 10619959 10620039 80 ATATGCATGTATGTGTGTGTGTGTGTGCGCGCAAAAGTAAATGTACACTGTCCTTTTCTAAAGAAATAGGATCTCTCTCT .:..::....:................:.:.::x:x..:x:....:.:xx.::....:.xxx..:.:..:.....x.... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% -66843902 -27386500 +3040 chr4 + 190214555 16766469 16766468 16766522 54 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTT chr4 - 94230402 38500857 38500856 38500910 55729493 55729492 55729546 54 TGTGTGTGCCTGCATGTGCGTGTTTAATTGTGTGTATCTATCTTTTTTTTTTTT ........:x..::....:....x.:xx.......:.x...x............ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -21734388 -72496014 +3154 chr4 + 190214555 16766471 16766470 16766523 53 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTTT chr4 - 94230402 38500857 38500856 38500909 55729494 55729493 55729546 53 TGTGTGTGCCTGCATGTGCGTGTTTAATTGTGTGTATCTATCTTTTTTTTTTT ........:x..::....:....x.:xx.........x...:........... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -21734386 -72496016 +3038 chr4 + 190214555 16766479 16766478 16766532 54 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTTTTTTTTTTTGAGACAGAA chr4 - 94230402 27034826 27034825 27034879 67195524 67195523 67195577 54 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCTACAAAA .:.:.:.:.:......................::...:....::.xxx...:.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -10268347 -83962055 +11803 chr4 + 190214555 16767974 16767973 16768263 290 ACCCTATCCCTCTTCACCAAAAACAGGATCCCGGTGCCAGGGCTGCCCCTCGGCATCTTTAACTTAAGCACTGACAGGTTACGTGGGATTTTTGCCAGAGTAATTATTTTTCAATTCAACAATAATGAGAAATTACCATGGCAACCACTTGTCATGTGGTACACATACACCCCC-----TCCAAAGAATGAACCATACTT----------------AAAGCATCTATTCCTTGAAAATGTGTTTTTTTTTTATTAAAATAAACTTA---AACAGGTCAAAGTGGAGAGCATT-CTGAAGGGGTCTGAAAGATGGG chr4 - 94230402 15049694 15049693 15049999 79180404 79180403 79180709 306 ACCCTCTTTTTCTTG--CAAAAAGGGGATGGTGAAGGCAAGGCTGCCCCCAGGCATCTTTAACTTATGCTCTGACAGGTTACGGGGGATTTT-GCCAGAGTAATTATTTTTCTATTCAACAATAATGAGAAATTACCATGGCAACCTCCTTTCACGTAGTGCACTCACACGCTCAAACATTGAAATAATGGCCTAAACATAACaaaaaaaaaaaaaaaaaaattaatgcttttaaaata------ttttgtattaaaataaaCTTAAGGAATGGGGCAAAGGAGAGAAAAGGACAGAGGCAGCCTGAGAGTTGGG .....x.:::....x--......x:....xx:.:x.x..:.........:x...............x..x.............x........-...................x.................................x.:.x...:..:..:...x:....x.:.-----.:x...x....:x.:.x..x.----------------...:x..:x..x.:..x.....:------....x................---..::..x.....x:....:x.xx-.x..:.x:.:....:..x.... 15M2D75M1D81M5I21M16I23M6D21M3I23M1I22M 218/281 77.6% 306/94230402 0.0% 34/281 12.1% 1718280 NA +3289 chr4 + 190214555 16791587 16791586 16791669 83 ACAAATAGAAGCAGCTGCTTTTGATTTACAAACACTGTAATCTTCCCCAGGCTTTAGATATTTTTTTTGACAACATCCAGATC chr4 - 94230402 15066819 15066818 15066900 79163503 79163502 79163584 82 ATAAACAGGAACGGCTGGTGTTGATTTATAAACACCAGAGTTGTCTTGAGAGTTTAGATA-TTATTTTGCCAACATTTAAGCC .:...:..:.:.:....x.x........:......::x.:.:x..::x..:x........-..x.....x......::.:::. 60M1D22M 56/82 68.3% 82/94230402 0.0% 1/82 1.2% 1724768 NA +22997 chr4 + 190214555 16809564 16809563 16810078 515 TTTCTGTCCCTTATA--GGATTTACGAAGATTCTTTGAGCAAAGGACTTTAATCAATGTCAGTGCTTCTAGGCATACAGTGACTACAAGTTTTGTACCTAAACCATGTTGGTTCCCTTCCTTTGGGAAAATGATCTTAAACTTCTGCTGGCCTGTACAAAACAAAACAAAACAAACAAACAAAAAAAAAACGGAACTACATGGGACTCGCTGATAAACTGGTATTGATTTTCACAGATCATCCTTGTCAAAAGGATTTATTGATGTGTCAATGCATGTTGTCGAGTGGATCATAGCAGGATGGCTTTGAAGGATTTATAAGAAATCTACAGGCTTTAATACACTCGGCGGTAAATAACTAACAAGTACTGCACATATTGATTCTTTTCATGTGGTCAATGCAATCTTTAGCCCACTAATTGTCAGTATTGACAAACAGTTCATGATCTAAATGAGCAGCTGGACATCCGTTCTGAGTGGAATGCTTCCAAATGGCATTTTCCTTGCTGTTCTCAGCC chr4 - 94230402 15074928 15074927 15075388 79155015 79155014 79155475 461 TTTATGTCCTTTGTATGGGATTTATAAA-ATTCCTTCAGTGAGCAGCATTAATCAAGGTCACTGTT--------------GGGTACAAGATCTGTCCCTACACCTTGTCAGTTACACAGCTTTGGGAAAAGATCTTTAAACCTTTG--------TAGAAAA--------------------------------GACTACATGGAAATAGCTGATAAACTGGTATCGATTTTCACATATCGCCCTTGTCAAAAGGATTTATTGATGTGTCAATGCATGTTGTGGCAAGGATCATAGCAGGATAGCTTTAAAGGATTTATGGTGAATCCATAGGCTTTAATACACTCTGTGGTAAATAACTAACAAGCACCGTGTGTATCGATTCTTGTCATGTGGTCAATGGAATCTTTAGCCCACTAATTGTT-GTATTGACAAACAGTTAATGATCTAAATGAGCTGCGGGACATCATTCCTAACCAGCAGTGCTCCAAGCATGCTTTTCTTTACCATTTCCTGCC ...x.....:..:..--.......::..-....:..x..::.:x::.x........x....x..:.--------------.:x......x.:...x....x...x...::...x.x:xx...........x:x::......:.:..--------..x....--------------------------------:.........:.x.x................:..........x...::........................................x.x:x...............:.....:..........::x:....:.:................x.:.................:..:.::::...:.......x..............x.....................:-................x...............x..x.......xx.:..:.x::.x.xxx:.....:::xxx.....:..:.::..::.x... 15M2I11M1D37M14D66M8D7M32D230M1D93M 360/459 78.4% 461/94230402 0.0% 58/459 12.6% 1734636 NA +3798 chr4 + 190214555 16812231 16812230 16812313 83 TACCACTGTCTCCAATGTCCAATTATCACCAGCCATTTGGGTGAGTGACAAGATATCAAGGGGAAATTCTTTCTAGATTACTT chr4 - 94230402 15079311 15079310 15079393 79151010 79151009 79151092 83 TGCAAGTGCCTCCTGTGTCCAATTATCACTACCCATTTCGGTAAGCGACAAGCTATCAGGACAAATCTGTCTTCCGACTGCTT .:.x.x..:....x:..............:.x......x...:..:......x.....:.:x:..x:.x.:.::x..:.:... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 1732920 NA +3019 chr4 + 190214555 16819455 16819454 16819505 51 CTCAGGAAAAAAAAAAAAAAAAAAAAGAAATTTCTGCACAGAAAATATTCC chr4 - 94230402 63265288 63265287 63265338 30965065 30965064 30965115 51 CTGAGGGAAAAAAAAAAAAAAAAAAAGAAGTGTTTGCGTGGAAGAATTTCC ..x...:......................:.x.:...:::...:.xx.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -46445833 -47784569 +8157 chr4 + 190214555 16823773 16823772 16823995 223 CCTGATGTTTGTTTCTTC--TTCCAGCCAAGATGAAGAGAAAACTGAATT-GTGCTTCTAGTGTACAATCTTACCTAATTATGCCAGCTGATCACTTAAAAGTAATGTTTGCACACAGAC-------CGGGAAGATGCTTACAAGAACCAGCTGGTTGATAAAGGCTATAAGTGAGGATTTGATTCGTTTTCAAAGAAGTGTTAACTATTTACATCTATTTATAAACACCACA chr4 - 94230402 15082384 15082383 15082614 79147789 79147788 79148019 231 CCTGATGACTGCTTCCTCCCTTCCCACCAGGATAAAGAGGAAACTCACTTTGTGCTTCGAAAACACAGTTTTGCTTAATTATGCTGCCTGATCACTTCAAAGCACTGTTTGCACACAAACATTGTTGCAGCTAACTGCTT--AAGAAGGAGCCAGCTGATAAGGGCTATGCAGGTGGGTTTGCCTCCCTTTCAGTACAGAAGGAGGTATTCACATCTGTTCTGAGACACAGCA .......x:..:...:..--....x:...:...:.....:.....x.x..-.......x.:x::...:.:..:.:.........::x..........x....:.x............:..-------.:.xx.:x.....--.....xx...::.:......:......:x:x.x..:....x:..x:.....:x:x..x:xx.:x....:......:..:xx.:....x:.. 18M2I30M1I69M7I13M2D91M 155/221 70.1% 231/94230402 0.0% 12/221 5.4% 1741389 NA +13710 chr4 + 190214555 16846758 16846757 16847018 261 TCCTTTGTATTAAGATGCCAAAGCCAAATCACATGGACAATGCAAA--AGAGCAGGCAAAGAGTGCTTTGTCACAAAAA--TATATAATTTATTTCAACAATTTCTGTGGATTTTTGATATCAAAGTCTCTTTAT--GACACTGACAGTCATCAAGCGGATGTTTGTCAAAGTACATTTCCCAGATGTCTAAATAAAACAGTTTTGCCTTGATGAGTTTTATACTGAGAGCTGGAGA-AGACTCCA--------CTCTATTTTAATTTCTCTCCTT chr4 - 94230402 15095037 15095036 15095312 79135091 79135090 79135366 276 TCTTTTCTATTAAGATACTAAAAACATATCAACCAGACAATAGAAATCACAGCTAGGAAACATTCTTCTGTCATAAAAAAATATATGATTTATTCTGACAGTTTCAGAGGATCTTTGATATCAAAGTCTCCTTATAAGACACTGACAGTCATCAAGTGGATGTTTGTCAAAGTACATTTTCCAGATGTCTAAATAAAACTGGTTTACTTTGATGAGTTTTATACTGATAGCTGAAGGTAGAATGCAGGCATTGCTTCTATTTGCAGCTCTTTACTT ..:...x.........:.:...:x..x....xx::......:x...--.x...x:.x...x.x.x:.:.....:.....--.....:.......:::...:....x.x....:.................:....--...................:......................:...................x.x...:.:...................x.....:..:-...x.x..--------:.......xx.x:...:.x... 46M2I31M2I54M2I100M1I8M8I22M 211/261 80.8% 276/94230402 0.0% 15/261 5.7% 1751721 NA +14005 chr4 + 190214555 16858467 16858466 16858830 364 TTCAGGTGAAAAGAAGACTTTTCCCCCACAACAAACTTTTCTTAAACGCTGCTTGGGAAGGGTGTTTGCTAAGTCCATTTTCTGATCAGATAACAGTTTGACACTAA-------TTCTTCTATTTTCAGCTGGCACCAGACCCGGTCCTCGACTTTATCACCCATCGGTTATCTGTGTCGCCTG-AAGGAACTCCGGGTAAGGTACAGGAAAAAGGTGGGGGTATTGTTGGAGCTTCCTGCTGGCCAGTACACTGGCCTATTG---------------------------TTGGATTTATTTTT---------TTAAACTATCACATCACAATTATTTCGGCAACATCCTTTTTCCATCCTGGACCTGATACAATATTTATTGAACTATACAAACTGCGTCAATACAC chr4 - 94230402 15096774 15096773 15097166 79133237 79133236 79133629 393 TTCAAGTCACAAAGAAGTCTTTTATCCAGAAGAG------CTGTAAAGCTGCATGGAAAGGGTGTTGCTTAGATCCATTTT-TAATCAGATATAAATTTAACAACAACAAAAAATTACTCCATTTTCATTTGGCACAGGACTCGGCCCACAGCATTATCA-------GCTATCTGTGTCGCCTGGAAGGAACTCCGGGTAAGTCACAGGAAAAAGGTGGGAGCATTGTCGTTGTTTCCTGATGGCCAGAACACTGCAGTATTGTTCTGCTGTGCTTTCTTTCCTTCTTTTTTGAAATTATTTTTAAGAAGGGGTTATCGCATCATGTCGTAATTATTTCTGCAACATCCTCTTTCCATACGGGAGTGGATGTACTATTTACTG-ACTGTGAAAACTGCATCAACACAC ....:..x.x..::.::::...:x:...x..x.:------..xx..x.....x...:.........xx:..::........-.:........xx.:...:...x:..-------..x:..:.......x:......x:...:...:..x.::.x......-------.:...............-.................x:................:.:.....:.xx.:......x.......x......xxx.....---------------------------...:.x........---------...xxx:....::..::.........x..........:.......x.x...x:x...::.x......:..-...:.:x.......:....:.... 34M6D41M1D25M7I46M7D17M1I78M27I14M9I70M1D24M 264/349 75.6% 393/94230402 0.0% 59/349 16.9% 1761693 NA +3052 chr4 + 190214555 16889058 16889057 16889102 45 AAATGTCTCTCTCTCTCTCTCTCTCACACACATAAACACACACAC chr4 - 94230402 51342064 51342063 51342108 42888295 42888294 42888339 45 AAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ....x...x.......................:..x..x..x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -34453006 -59777396 +3096 chr4 + 190214555 16897880 16897879 16897973 94 ATTTGTAAAAAAGAAAATATATATATATATATATATATATATATATATATATATATATACACATATGTATATATATATATATATATATATATAT chr4 - 94230402 71926792 71926791 71926885 22303518 22303517 22303611 94 ATTTTATAAATAGCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATAT ....xxx...x..x..x.........x.:.:::..:...:.x..:.x.:......x...x.:xx.......x.::..:...xx.x..x.x.... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% -55028912 -39201490 +3212 chr4 + 190214555 16897893 16897892 16898012 120 AAAATATATATATATATATATATA--TATATATATA---TATATATATATACACATATGTATATATATATATATATATATATATATACACATATGTATATATATATATAGCCAGATGCAAACAAT chr4 - 94230402 35554919 35554918 35555043 58675360 58675359 58675484 125 AAAGTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAGT ...:...:.x.x.x.:.x.x..:.--.x..x:....---..x......x.:x:::.:...::.:....:x:.:.........::.....x.x....:..x.x..x:.x:x:..:..:......:. 24M2I10M3I86M 77/120 64.2% 125/94230402 0.0% 5/120 4.2% -18657026 -75573376 +16831 chr4 + 190214555 16898348 16898347 16898750 403 ACTTACCTCTGTGCGAGACTGCAGTCTCTTGTTCATCTCATAGATTCGGTACTCTGGCTGTACCATGTATGGTGTATGCCTCCTATAAAATGGGCCGAAAGGAGAAGAATAGAAGGGGTCATGTGGTGTGCTGGACATCTTGCCTGCTTTTCGAAAATCAAGCTAAACAGAGTATCAGTAACGTCCATGCAGAGCACATGGGCT--GTGTTCTTCCCAGTACAAAGTAGACGCACGCACACACGCTCACACACACACAGAGGCAGGCAGGCAGGCAGGCTGAACACGCTGGCTGGGAACTGCTGTCGGAGCCCTCTATAGCAGGAGAGGAGAGGGAGAGGAGAGGAGGGAGGGAAAGAGGGAGGGAGGGAGGGAGCACGGGAGAGGAGGGAGAGGGAGAGAGCAG chr4 - 94230402 15128095 15128094 15128464 79101939 79101938 79102308 370 ACTCACCTCGCTCCGCGCCTGCAGCCGCTTGTTCATTTCGTAGATTCGGTACTCCGGCTGCACCATGTACGGCGTGTGCCTCCTGTAGAACGGGCCAAAAGGAGAAGAATAGAAAGGGTCATGTGGTGCGCTGGACATCTTGCCTGCTCGCGGAGGTTCAAGCGACACAGAGTACCGCCAACCTCCATGCAGAGCACATGGGCTGCGCGCTCTCCGCGGCACAAAGTAGCGGCAGGCGCACACGCACACAT----------GCGGGCGGGGA--------------GCTGCCGGGGAGCTGCCTGC-GAGCCCT------CAgcgcgggcggcggcggggggggcgcggggcgcgccggggcgggcggcagtgggcgcgg----ggagcgggggGCCGCGGGCAG ...:.....xx.x..x.x......:.x.........:..:..............:.....:........:..:..:........:..:..:.....:.................:.............:...................:x:x..::x......x.x........:.:x:...x.....................--.:.:...:.x.:.:.........xx...x..:.......x....:----------..:...:..x.--------------....x.x....:....:xx.-.......------...x:x:..x.:x..x.:..:.:.x:x..:.x.x:xx:...x...x..x..x.:..:...----....x.:.:..xx.x.:.... 204M2I45M10D11M14D20M1D7M6D60M4D21M 278/368 75.5% 370/94230402 0.0% 37/368 10.1% 1770253 NA +3189 chr4 + 190214555 16898737 16898736 16898834 98 GAGGGAGAGAGCAGGAGCTCCAGAGAGGGAGGGAGGTTGGTATGGAGGAAGGGAGGGAAGAAGGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGGGAG chr4 - 94230402 5084196 5084195 5084287 89146116 89146115 89146207 92 GGGGGAGAAATGAGAAGT------GAGGGGGGAATACTGAAACAGAGGAAGCCATGGGAGAGGGCAGAAAGGAAGGGAGGGAATTGACAGTCAGGGAG .:......:.xx..:..:------.....:..:.x::..:x.::.......xx.x..:...:..x..::...:.........:xx.:x..xx...... 18M6D74M 61/92 66.3% 92/94230402 0.0% 6/92 6.5% 11814541 NA +3112 chr4 + 190214555 16898807 16898806 16898889 83 GGGAGGGAGGGAGGAGGGAGGGAGGGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 93491109 93491108 93491191 739212 739211 739294 83 GGCACAGAGGGAGGGGGCAGGGAGGGAAGCAGATGGAGAGAGAGCTGCCGAGGTACAGTGTGAGAGAGGCAGCAGGAGGGGAA ..x.x:........:..x.........:.x:..x:.........xx:xx...:x.x..x.x.......:x..x::...:.::. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% -76592302 -17638100 +3339 chr4 + 190214555 16905955 16905954 16906000 46 TGTCCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGGTGGG chr4 - 94230402 72884657 72884656 72884702 21345701 21345700 21345746 46 TGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGG .....:.:...:..............:.........:..:x..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -55978702 -38251700 +3512 chr4 + 190214555 16926795 16926794 16926905 111 TTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCCCTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCCCT chr4 - 94230402 33962958 33962957 33963068 60267335 60267334 60267445 111 TTTCTCTATTTTTTTTTTCCTTTTCCTAATTCTTTAAGGTCTTTTTTCCCCCTTTTTTCACATCTTGTACTCAGATTCCCAAGTTACTTCCCTCCCCTTCTCTTTCTCCCT .....:.x...:...:.::..:.:::.xx......xxxx::..:....:::....:..:x:x....x:x...xxx:....xxx:.x.:........::.....:....... 111M 68/111 61.3% 111/94230402 0.0% 0/111 0.0% -17036163 -77194239 +3198 chr4 + 190214555 16926871 16926870 16926937 67 TCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCCCTCCCTCCCTTCCTCCTTTCCTTCCTTCCTTCCT chr4 - 94230402 51457788 51457787 51457854 42772549 42772548 42772615 67 TCTCTTTCTGTATCCATCCATCTCTTTCTCCCCCTACCACACTCCATCTCTTCCTTTCTTTTTCCCT ..:..:...x:x...x...x.....:....:....x..x.x..:.x..::......:...::.:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -34530917 -59699485 +3606 chr4 + 190214555 16936848 16936847 16936930 83 CTGCAACCTCTGCCTCCCGGGTTCAAGGGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGTGTAACACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:.........x.x...x..x.x........::...........:.:....--:...:.x...::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -1260278 -92970124 +20815 chr4 + 190214555 16952512 16952511 16954376 1865 ACTTAAATCATGCTTGTCACTGCATGCATCTCCCTCAAACGATACAATAAAAGGGCAGGGCATTCACCGCTGATTCCCAGGAACAGAAACCACTAACAAATGTATCTCGTTAGTCTGCTGTCAG-GAGCAAGATTTTTATCAGGAATGTTATATTTCTGAAGACACCAGAATAATTTCCTCCTAATAAATTTCCATCTTATTCAGAAAAGCTGAGATTCTGCCAGGAGCTCAGAGCCTCCTGGGGGTAGGGCTCCGGCAGCT-TTGTACTGCCGGATTAGATGTGTGTGCACGTCTGCGAAAGGCTGGGATGAACCCAGCACACGAAAACACATTGGGGCATTTAAAGCAAGAGCACAGTGGCACTCGTAGCCTGGGTATAGGTTCCAAGTACCCTTTTAAAA-GGACCTAAAATATGATTTAATGGACTTGCTTCCCCTCCCAGTAGAGGAGGAAGTGGGTTTGCCTGCCTATTCATTCTT------GCAAAGAGGAAA-------GTAAATATATTCCTATATTCATTTTAGACTTGATTCATGGAAGTTTGAAACACTGTTAATGCTGCATGGTTTGTATTTTTGGTTTTGTTATCTCCAGTTTGAGGTTTTCTTATACATGCTCCATTTGCACGAGCACTCATTCCAAATATGTCAAGAAAACACACCCAAGAAGAGAATTTCTGAAGGCCCTAATGGATTAATTCCTGCAAAGGATATAAGATACA--TTTAACTGTTTAAACATGGATGGCATTTTTAAAAACCAG------------------ATAAGAAAAAACTCAGTCTTTCTCTTCTTT---CCTTTGCTTACAGCTTCTCCTCAATTCTTTAATAAACAGAA---GAAGAGTCT----TGGGATCCTTTTCCTCCTTTTATTGAGTAATGTTCTACTTTTTACTGATCC-CAAACTATATTTAAACTCCAAATTCTTTTCTCCTCC-CCCAAGAGATTACCAAGCATGCTATTCCAAACAATAGCTAATGAAATGAAGAGGAATA---GCATGGCTTAAAAAAAAAAAAAAAAAAAAAAGAAATGTCATTCTAGCCTGCAAACTAATTTCATTTGTGATTTA-----GCCTGGCACCTTTCCCCCTAGAACTTCCCTGGGGAAAGGATGAATGGCCATCTCAACATTGCATAAAAATTAGTA--TCAGGCTACAAATTATTGGACCTTATTAGAGATTTCTTT--TAAGTAAATTAAGGTT--ATAGATCACAATCTTCCAAGAGGCTTGAATGTTT-------------------------------------------TGAATTCTCCAAACTCAGAGAA-------------TATTTAAAATTTCCTG----AAATCTA----ATAGTAAATATAATTAGAAGACAGGACCTGGTTGTTACAAACCCAGCTCCTTTTTTGTGGCACTCACATTAAAAAAAAAATAA--AAATGAGA-TGATGGATCTTATAAT-----TAAAAGATATTTGGCAAA-----------TAAAATTGATCACATGGTTAGCAAATCGTACATT-AGGAGTGT---ACCACCAATTCTCTAATCTGTCA--GATCACCAGGAAATTTAAAAGATGCTATTGCTTGTGTGCATGTGTGTACACATACTCACATTTGTGTGTGTGTATACTTGGATTTGTGTTTGTGCCTGTGTATTTCAAGCCACACAAGGGCTGTTCATATTTCCTCCACCCAGACACATCTATGTTTATGTTCTATGTCTTTGTTTCTTCAGTCATCAGTTTTAAGCTAAATTTTATTGCGTTTTCTGCATCTTTCAAGTAGCAAGCTGATATTAAACTCCAATGTTCAC-ATAATATTGAGGAAATCTACACATTA----CTGCCAAGCACAGTGACTACACATTTCACATTTCATGTTAAT-----TTTACAAA---AATGTTAGCCA----TGTCTAGGTGGAAATGCTATTCTTT-CAGGGGAAGTGCCTACCTTACAGATAGGTTCCCATACATTC chr4 - 94230402 15142821 15142820 15144645 79085758 79085757 79087582 1825 ACATAGATCATGTCTGTCTCGGAACGTAAATACAC--AGCAGTGCAACAGAAGAATTAAA-ATTAACAGATGAGTCCAAGGAACAAAAAGAGCTAACAAACGTGTCTTGTTAGACTGCTGTCAGAGAACAAGATTTTTATCAGAAATGCTGTTTTTCAGAGGACACCAGGATAATTTTCTCCTAATAAATTTCCATCTGATTGAGGGCGGCCAGCATTCTGCCAGTCAGGGGGACTCTCCCAGGGGCACAGCTTGCACAGCTCTCCTACCACTGGATTAGATGTATGCACACGTTT-TAAAATGCAGT----------GCCTATAAAAGTGCAGTTGGTTATTTTAA--AAACACACGGCAGCGTTAGAAGTTT---------------GCCCCATTTTAAAACAGACCCAATACTTCATTTATTGCAGTCTTTTCCCCT--GAATTCAGG-GGAAATGAGTGTGCATAATTCCACATTCCCTGGAAGGCAAGGGGGGAACGTTGGTCTAAATA-GTTCGTGGTGTTGTTTTCTAATT--TCCACAAA---TCAAAACA---------------------TATTTTT--TTCTACTGCCT-CACCTATAATTTTTCACAAATGTGTGTCCTTTGC---------CTTTAAAAATATTTAGAGGAAAAA-----AGGAACTGTGTGTCATAGGGTATTAGCTGATTAGTTCATTCAAACAGTGCTAATTATAGGTTTAATTGCTTAAATGTGAAAGTCATTTATTTAAATTAGCTGCATCAAACATACAGTATACTCAAAAACTGAAACATTTTGGTACTGGGAACCAGGGTTA---------------TTTTCTGTAAACAGAACATGCAAAATATAAGATGAGA--------------------AACAATGTGCCTCTATGTACTGATCAGCAAACT-CATTTAAACCCCAAACTCCCTCCTCCCCTGCCTCTGGGGTCGGAGAACAGCCTCATTTGAACAATGACTAATGGAATGCACTGAAATGTGCGCAGGGTT----------------GAAAGGAGAAATACTATTCAAGCCAACAAACTCATTTCATTTGTGATTTAGAGGGGCACTGCACCTTTCCCCT--GAACTCCTCCTGAGAAGGAATGAATGGGCATCTCAAGGTTATGTAAAAGCTAGCACTTCAGG-TGAAAAGTATGTTATTTTTTAAAATAGTAAATGAAGAAATAAATAAAGGTTTGTTATGCCTTAAAATTCTACAGGGAAAAGATGTTTCCCTGCAACAACAACAACAAAAAAAAAGTAGTTAAAGCTATAATGACTGTAGCAACGATAGAAAAGATTATGATTGTGTATTAAAAAATATTTGTATTAAATACACAGCATGATAACTCTGATCAGAATGTAAGAGATGG---------GCTCAGCTTTTT-------------AATCTGAAAAAAAACCAACCAAACAAAACCCACAGACCCAAGAATCCCACTGAAAAACATAAGAAAAAGAAGAGAATTTTAAAGAAGATGAAACATTTGGCAATTAACATACTGAGGAACGCGTGGCTGCCAATCCCTCCATCTTCCCGTGTTGACAAAGGAA-----------------------TGCATATATACATAGAGATATACATTTAT-----TTTAAGAAAGAATTTTTCTGAGGAACAAAGAGATTCAG-------AAGAGC----CAGATTC------CCCAGATATATCAGTTTTCATGTTCTGCATCTCTGTTCCGTCAGTAATCAAGTTGTATCAGAATGTTATTGCATTTT-------TCTAAAGCTTCAAGTTGATATTAAGCTTCAGTATTCTCAACAACATTATGGAAGTACACACGGCAGCAGCAGCAAAGGCTGCTGGATGCAGAAAGCTTCTCTTAATTTAATAAGGGTTTTTAAACCGAACGCTATGCACCATTGACTACGCAGGAAAGCTATTTTTTGCTGCAAAAGTTCCCAGCTCATGAATA--TCCTTGTACGCTC ..x..:......::....x.x.x.:.:.xx.x.x:--.:.::.:...:.:...:::x:::-...x..x.x...x...x.......:...xx:........:..:...:.....x..........-..:...............:....:.:.x....x..:........:.......:....................x...x..::x:..:::x..........xx:xxx:..x:....::....:.x:...:xx:.....-.:x...::.:...........:..::.....:.-::...x..x.x----------..x:.::...:::..x.x..x:....x..--..:x:...:.::..::.x.x..::.---------------.:x..x........-:....:..x.:x.x.....x..x.x.:x:.......--x.:.xx...-....:..:..x...x.:x:.x:x.....::------....:.:..:..-------x......-:...x.:xxx.::....xx.x..--.:..:::.---.::.....---------------------.......--..:.::.::..-..x:.xx.:x.....x:.x.::..:x:.x.....---------.x..xx......x.x:..:...x.-----.:...xx.x:.x..xx.:..:x:..::x.....:...x.x....x::.::x.:x..:.--.....:..:.....::..:.x.x.....x.xx...::..------------------...xxx.......x.:x.x..:.xx.x:.x---x.:xx.x...---------------.:..:x:.........---.x.:.:.x.----..:..--------------------.::.....x.:x..x.x........x-......-:........:.....:..::.:....:.:-..:xx.:.:.::xx:.:..xx..xx.:::......::......:....x.xx.:...:---...x..:.----------------:...::......:::....x....x:......x.................-----..x:x............:--.....:.:.:x.:...:.:........x........x:..:::.....::...:.--.....-.:x...x...xxx.::..x.x.:.x.x.xxx.x--x..:.....x......--x..x::.x:..xx...:.x::..xxx::......-------------------------------------------...x.x:xx...xxx:...:..-------------....x....x.x::..----....x:.----..::...x.x.:..:....x::.:..xx...---------:.:.....::..-------------.xx:.:........x:..--...::.:.-:x.::..:.:x.x...-----.:...:.:..xx.:x...-----------....:xx...x.x.::x..:....x.x::.:.:.-....::.:---:.::.....:.:::x....x:.x--.x.x..x.:.:..-----------------------.....:.:.::.:.x.x.:x:......:.-----.x..x:xxx.:....x.x.xx.x:x.x:x.x:x....:-------...:..----..x...:------......:.:...x:.x..:.......:::...:....:.x.....x....:x..xx.x.x:...x.......:....-------.:.x...:xx....:.........:..:..:.:...x.-.:..:...:x....:.x:....:x:.----.x..x...xx::x..:x.:..x.xxx.x:x.:.:.xx.....-----...x:...---..:.:..xx..----..x...x.::.:..x......:...-.x.x::....x..:.x..:.:::...--.:.:::...::.. 35M2D23M1D63M1I137M1I33M1D11M10D29M2D25M15D14M1I36M2D9M1D30M6I12M7I7M1D23M2D8M3D8M21D7M2D11M1D34M9D24M5D58M2I39M18I30M3I10M15D16M3I9M4I5M20D26M1I6M1D29M1I58M3I8M16D50M5I18M2D55M2I5M1D33M2I16M2I34M43I22M13I16M4I7M4I31M9D12M13D18M2I8M1I16M5I18M11I34M1I8M3I23M2I13M23D29M5D38M7D6M4D7M6D77M7D38M1I26M4I42M5I8M3I11M4I25M1I26M2D13M 1064/1656 64.3% 1825/94230402 0.0% 378/1656 22.8% 1809691 NA +7751 chr4 + 190214555 16953462 16953461 16954376 915 AACAATAGCTAATGAAATGAAGAGGAATA---GCATGGCTTAAAAAAAAAAAAAAAAAAAAAAGAAATGTCATTCTAGCCTGCAAACTAATTTCATTTGTGATTTA-----GCCTGGCACCTTTCCCCCTAGAACTTCCCTGGGGAAAGGATGAATGGCCATCTCAACATTGCATAAAAATTAGTA--TCAGGCTACAAAT-TATTGGACCTTATTAGAGATTTCTTTTAAGTAAATTAAGGTT--ATAGATCACAATCTTCCAAGAGGCTTGAATGTTT----------------------------------------TGAATTCTCCAAACTCAGAGAA-------------TATTTAAAATTTCCTG----AAATCTA----ATAGTAAATATAATTAGAAGACAGGACCTGGTTGTTACAAACCCAGCTCCTTTTTTGTGGCACTCACATTAAAAAAAAAATA---AAAATGAGATGATGGATCTTATAAT-----TAAAAGATATTTGGCAAA-----------TAAAATTGATCACATGGTTAGCAAATCGTACATT-AGGAGTGT---ACCACCAATTCTCTAATCTGTCA--GATCACCAGGAAATTTAAAAGATGCTATTGCTTGTGTGCATGTGTGTACACATACTCACATTTGTGTGTGTGTATACTTGGATTTGTGTTTGTGCCTGTGTATTTCAAGCCACACAAGGGCTGTTCATATTTCCTCCACCCAGACACATCTATGTTTATGTTCTATGTCTTTGTTTCTTCAGTCATCAGTTTTAAGCTAAATTTTATTGCGTTTTCTGCATCTTTCAAGTAGCAAGCTGATATTAAACTCCAATGTTCAC-ATAATATTGAGGAAATCTACACATTA----CTGCCAAGCACAGTGACTACACATTTCACATTTCATGTTAAT-----TTTACAAA---AATGTTAGCCA----TGTCTAGGTGGAAATGCTATTCTTT-CAGGGGAAGTGCCTACCTTACAGATAGGTTCCCATACATTC chr4 - 94230402 15147954 15147953 15148891 79081512 79081511 79082449 938 AACAATGACTAATGGAATGCACTGAAATGTGCGCAGGGTCGAAAGGAAAAA----------------TACTATTCAAGCCAACAAACTCATTTCATTTGTGATTTAGAGGGGCACTGCACCTTTCCCCT--GAACTCCTCCTGAGAAGGAATGAATGGGCATCTCAAGGTTATGTAAAAGCTAGCACTTCAGGTGAAAAGTATGTTAGTTTTTAAAATAGTAAATGAAGAAATAAATAAAGGTTTGTTATGCCTTAAAATTCTACAGGGAAAAGATGTTTCCCTGCAACAACAACAACAAAAAAAAGTAGTCAGCTATAATGACTGTAGCAACGATAGAAAAGATTATGATTGTGTATTAAAAAATATTTGTATTAAATACACAGCATGATAACTCTGATCAGAATGTAAGAGATGG---------GCTCAGCTTTTT-------------AATCTGAAAAAAAACCAGCCAAACAAAACCCACAGACCCAAGAATCCCACTGAAAAACATAAGAAAAAGAAGAGAATTTTAAAGAAGATGAAACATTTGGCAATTAACATACTGAGGAACGCGTGGCTGCCAATCCCTCCATCTTCCCGTGTTGACAAAGGAA-----------------------TGCATATATACATAGAGATATACATT------------TATTTTAAGAAAGATTTTTTCTGAGGAACAAAGAGATTCAGAAGAGC----CAGATTC------CCCAGATATATCAGTTTTCATGTTCTGCATCTCTGTTCCGTCAGTAATCAAGTTGTATCAGAATGTTATTGCATTTT-------TCTAAAGCTTCAAGTTGATATTAAGCTTCAGTATTCTCAACAACATTATGGAAGTACACACGGCAGCAGCAGCAAAGGCTGCTGGATGCAGAAAGCTTCTCTTAATTTAATAAGGGTTTTTAAACCGAACGCTATGCACCATTGACTACGCAGGAAAGCTATTTTTTGCTGCAAAAGTTCCCAGCTCATGAATA--TCCTTGTACGCTC ......::......:....x.xx.:...:---...x..::x...::.....----------------.:::....x....x:......x.................-----..x:x............:--.....:.:.:x.:...:.:........x........x:..:::.....::...:.--.....:x.x..:.-.:..:.x::...xx.x..xxxx:xxxx..:.....x......--x..x::.x:..xx...:.x::..xxx::......----------------------------------------...x.x:xx...xxx:...:..-------------....x....x.x::..----....x:.----..::...x.x.:..:....x::.:..xx...---------:.:.....::..-------------.xx:.:........x:.---...xx:.:x:x.::..:.:x.x...-----.:...:.:..xx.:x...-----------....:xx...x.x.::x..:....x.x::.:.:.-....::.:---:.::.....:.:::x....x:.x--.x.x..x.:.:..-----------------------.....:.:.::.:.x.x.:x:.....------------..:..x:.xxx:x:...x.x.:x:x.x.:xxx:..x:x..x...:..----..x...:------......:.:...x:.x..:.......:::...:....:.x.....x....:x..xx.x.x:...x.......:....-------.:.x...:xx....:.........:..:..:.:...x.-.:..:...:x....:.x:....:x:.----.x..x...xx::x..:x.:..x.xxx.x:x.:.:.xx.....-----...x:...---..:.:..xx..----..x...x.::.:..x......:...-.x.x::....x..:.x..:.:::...--.:.:::...::.. 29M3I19M16D39M5I18M2D55M2I13M1I42M2I34M40I22M13I16M4I7M4I31M9D12M13D17M3I25M5I18M11I34M1I8M3I23M2I13M23D26M12D47M4D7M6D77M7D38M1I26M4I42M5I8M3I11M4I25M1I26M2D13M 515/821 62.7% 938/94230402 0.0% 211/821 25.7% 1805508 NA +3292 chr4 + 190214555 16957310 16957309 16957407 98 ATAAAAAT--CTGGAAAGATATATATAT--ATATATATATATATATATACACACACACACACACACACACACACACATATATGTATATATATTATATATATA chr4 - 94230402 4481662 4481661 4481763 89748640 89748639 89748741 102 ATAAAAATGACAGGGACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTA ........--.x..:.xx:...:.:.x.--.....x:.:.:.:...:.:....x...:.....:x....:..x.xx.:....:.:..:.:.....x..x:.. 8M2I18M2I72M 67/98 68.4% 102/94230402 0.0% 4/98 4.1% 12475648 NA +3255 chr4 + 190214555 16957319 16957318 16957387 69 TGGAAAGATATATATATATATATATATATATATATACACACACACACACACACACACACACACATATAT chr4 - 94230402 8395801 8395800 8395869 85834534 85834533 85834602 69 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ..x.x.:.:..:...x..:....:...::x..:..xx.:.................x.....x..:x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 8561518 NA +3209 chr4 + 190214555 16957322 16957321 16957386 65 AAAGATATATATATATATATATATATATATATACACACACACACACACACACACACACACATATA chr4 - 94230402 8395806 8395805 8395870 85834533 85834532 85834597 65 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x..:...x..:....:...::x..:..xx.:.................x.....x.::x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 8561516 NA +3060 chr4 + 190214555 16957326 16957325 16957385 60 ATATATATATATATATATATATATATATACAC--ACACACACACACACACACACACACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...x.:..:...x..:....:...::x....:--.:.................x.....x.. 32M2I28M 47/60 78.3% 62/94230402 0.0% 2/60 3.3% 8561522 NA +3041 chr4 + 190214555 16957327 16957326 16957384 58 TATATATATATATATATATATATATATACACACACACACACACACACACACACACATA chr4 - 94230402 8395813 8395812 8395870 85834533 85834532 85834590 58 TATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x..:....:...::x..:..xx...................x.....x.::x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 8561514 NA +3052 chr4 + 190214555 16957334 16957333 16957406 73 ATATATATATATATATATATACACACACACACACACACACACACACACATATATGTATATATATTATATATAT chr4 - 94230402 4481692 4481691 4481764 89748639 89748638 89748711 73 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTAT .....x:.:.:.:...:.::...x...:.....:x....:..x.xx...........:.:..xx.x..x:... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 12475642 NA +3167 chr4 + 190214555 16982389 16982388 16982500 112 TGTTTGCATACATGCATACACATATATCTCTCAATGGTCTCTCTCTCTTTCTCTCTCTACTCTCTCTCTCTCTCCTAGTGTGCATGAGAGAGACT------CTTCTTTTTGGCCTTAA chr4 - 94230402 21634130 21634129 21634247 72596156 72596155 72596273 118 TGTATTTATTCCTATTTACTTATATATATCTTTATGTTCTCTCTCTCTCTTTTTTTTTTTTGTATATCTTTTTTATAGCCCTCTTGAGAGATGCTATTTCCATTTTCTTTGGCTTGAA ...x.x:..x.x.::x...x:......x...:x...x...........:.:.:.:.:.x:.x.x.x...:.:.:x...:x:x.x.......x:..------x..:.:......:.x.. 95M6I17M 72/112 64.3% 118/94230402 0.0% 6/112 5.4% -4651741 -89578661 +3576 chr4 + 190214555 16985979 16985978 16986100 122 CATATATACACATATGTATACATATATACATACATATATCTATATACACATATATAGATATATATGTATACATATATACATACATACAGATATATATACACACATATATACACACATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCA--TGAGTACATACGTATAGGTACACGAGTATATGTGAGTAC----------ATATAAATACGCCCACAGAGACACACATGTATA .:.:.::.::.....x:.....:.......:.x.x::.--.:x:....:.::.....:..:.::x.....::.:x:...----------.....x....:.x..:.x.x........:.... 38M2D39M10D33M 73/110 66.4% 110/94230402 0.0% 12/110 10.9% -56135121 -38095281 +3272 chr4 + 190214555 16986052 16986051 16986168 117 ATATACATACATACAGATATATATACACACATATATACACACATATATATGTGTGTGCGTGTATATATATATATATACACTCACAGTCATCCTTTGG-TATTCATGGGGGACTGGTTC chr4 - 94230402 7596413 7596412 7596508 86633895 86633894 86633990 96 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACG----------------------CACGCACGCTCATTCTTTGTCTTTTCCTGGAGTGCTAGCTC ...:.x..:......:..:...........::..:..:...x.:.....:x.::.----------------------...x...:x....:.....x-.x...x...:.x:..:.:.. 55M22D20M1I20M 68/95 71.6% 96/94230402 0.0% 23/95 24.2% 9389639 NA +3132 chr4 + 190214555 17006868 17006867 17006933 66 AGCAAAGAAATGTGTGTGTGTGTGT-------------ATATGTGTGTGTGTGTGTGTGTATATATATATATATATACA chr4 - 94230402 89821243 89821242 89821321 4409082 4409081 4409160 79 AGCAGAAAATTCTCTGTTTGTTTCTTCTGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ....:.:..x.x.x...x...x.x.-------------..:.......x.x.......................:.... 25M13I41M 54/66 81.8% 79/94230402 0.0% 13/66 19.7% -72814375 -21416027 +3156 chr4 + 190214555 17006897 17006896 17006941 45 GTGTGTGTGTGTGTGTGTATATATATATATATATACATTAAGAAT chr4 - 94230402 9151856 9151855 9151900 85078503 85078502 85078547 45 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAGGAGT ................:......x....x.:....:....:..:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 7855041 NA +3235 chr4 + 190214555 17006906 17006905 17006980 75 TGTGTGTGTATATATATATATATATACATTAAGAATATTGGCAGGATCTAGCACAATTAAAAATGCACACTCCCT chr4 - 94230402 92830167 92830166 92830241 1400162 1400161 1400236 75 TGTGTGTGTGTGTATATATATATATATGCTTGGTATGTTTTCATGAGAGAGCACAGTGAAATATGCTCTTTTCCT .........:.:..............:::.x:.x..:..xx..x..xxx......:.x...x....x.x:.:... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -75823261 -18407141 +3677 chr4 + 190214555 17008472 17008471 17008544 73 CTGCAACCTCTGCCTCCCGGATTCAAGTAATTCTCCTGTCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.:..:.......:x...x.xx.x........:..:.........:......x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% -1188654 -93041748 +3220 chr4 + 190214555 17009701 17009700 17009754 54 GAGAAGCCACCATCACTCATTTTGTTGTTGTTGTTGTTTGTTT----TGTTTTGTTTT chr4 - 94230402 2688635 2688634 2688692 91541711 91541710 91541768 58 GAGAAGCCCAGACTACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTT ........xxx.::...x.........................----.x......... 43M4I11M 47/54 87.0% 58/94230402 0.0% 4/54 7.4% 14321066 NA +11926 chr4 + 190214555 17012425 17012424 17012894 470 AAGAAGGGACCAAAAAGAATGTTTTAGATGAAATCAGATGTGACCCCT--GAAATCAAGAGCATTTGCAGAGCATGGTTTTAATTATGGG------------GGCTCAGTCAGCTTCCCAGTACCTGCCCTT--GGCTGCAGCTTGGTGCACCTCTAAAAATCTGCATGGCCTGCCAGTCTGCCAGCAGGAAGGGTTTATGGCCTCTCACTCCATTAAAAAATAAATAAATAAATCAGAAGCCCCTGAGGCAGTCACGTGTTTAGAAGCAATGAAATTGCAACCTGTTTACCTCCTCTTAGACATTTAAATTCCCAGCCAAGGTACACCCTTATAAGCTACCATTAAACGTTATTGTGAAGGAATTAGAATTTTTTGGCTCTGATGCAGTCTGACTTGCAGCATATGGCCCATCACCGAAACCCAGAGGCTCATCCTGTGTTTTTCAAGATCTCATAAAATTGTCCAGTTCTAATGGAAGGAAAGA chr4 - 94230402 15170366 15170365 15170818 79059585 79059584 79060037 453 AAAGAGGAGACAACGGGAAAGTCTAAGATGAAATCAGAGGTGATCTTTTTGAAATGGGGAACATTTCCA-----TGGTTTTAATTAGAAGCCTAGGAACCAGAGTTAAGCAAGCTTGAAGATCCCTGCACTTTCAGCTG-AGCCTGGTGAAACTTTCAAAA--------GTCTGCCTGCTTTACAGCACATAGGTTTTATAGCCTCTCACTCCATTAAAAAA--AATGAATAAATTAGAAGCCTC-AAGGCAGCCACATATTTAGAAGCAATGAAAATCCAACCTGTCTACCTCA---AAAGCATTTAAA-----GGCAAATGTA------TTTGAGCAGAAATGAAAGCACAGCA-GAATGAATTTAAACACCGTTACTTTGCTCTAATCTATGTTGCTCCTCATGGCACAAGTCTGAAGACTGAGAGTTCACTCCTTGTTTCTTAATATTTAACAAAA-TGACAAATTCCAGTGTAAAAAAAAA ..::...::x...x::...x..:.x.............x....:.::.--.....x::..:.....x..-----............x::.------------:.:.x..:x.....xxx::.x.....x...--:....-...:.....x.x..:.x....--------.:.....x.::.xx.....x:x...x.....:.....................--...:.......:.......:.-:......:...:.:................x.x........:......x---x.::........-----:..x..x...------.x.:...x:xx..x...xxx:.x::-...x.....x:..:x::x.x:..:..x.x:.:...:xx....xx.x:.....x..xxx.:...:x.:::::.:...::.:x.....:.:..x..:.x.:....-..x.x.:...:.:..x..::...:. 48M2I19M5D16M12I30M2I5M1D21M8D53M2D21M1D49M3D12M5D10M6D25M1D103M1D25M 300/437 68.6% 453/94230402 0.0% 49/437 11.2% 1842059 NA +14044 chr4 + 190214555 17020427 17020426 17020828 402 ACATGAAAGAAAATCCTCTCTCTCTTTTGGAAAAATAAAACCTCACATGTGAGAAATTTTCAGTAATATAATTTGCATTTGAAGAAAATGTCAGAATTATTTAACACAAGATGGGAAGCAAAAGTGAAAATGTAAATGATTGGGGT-GTCTTTACAAAAGGGAGATAGTGTCACTTAGTA-CAGACACATTTCTCTCTGCAAGGGTTTCAAATGATAATGTTCTCCTTGAAACATGTTAAAAGTCTGAGTCGCAAATTTCAAATTGTCACTGCATGATGAGCTCTAGCATTA-AAGAGAAGGAAAGATCTGCTTGTTTTTCATGCATGCTACATTAAAACTCCTGAAAATTCCCATTTGAGTTGTTGATTTTACTTCAGTTTTCCAAAAACTGGAGACCCTGCCT chr4 - 94230402 15172822 15172821 15173210 79057193 79057192 79057581 389 ATATAGAAGAAAGCCAGCAAAGTCTTT---AAAGAGAATACCTAA--TTTAGGTGACTTTCA-----AAAAATTGCATTTGAAAAAAGTGTCACTGTTATTTAGCTTAAGATGGGAAGCTGAA-CAGAAATTTAAATGACAGGGGTCTTTTTTACAAAA---AGATAGTGCCATTTTTTAGCAGAGACATTTCTCTTCACAGGTTTTTCAAATTATA-TGTTCTT-GTGAAGGATGTTAAATGTCTGGGTTGTAAATTTCAAATTGTCACTGCATGATGAACTCCAAGATGAGGAAGGAAGGAAAGAATTACTTGTTTTTAATTTAGGCTGAACATAAGCTATTGAAAATTCATATTTCATTTGTGGATTTTGCTCTACATTCACAGGAGTTAGAAGTGCTACTT .:..::......::.xx.xxxx.....---...:.x..x....x.--.x.::.x:.:.....-----.x..x...........:...:.....xx:.......:.x:............x:..-:::....x.......:x.....-x.:.........---........:..:..xx..-....x..........:::..:.xx........x...-......:-x....:x........x.....:..:.:...........................:...:.:x..x.-:.::..........x:.:.........x..x:.x...:x.:xx..:..x:.........x:....x.x....x......:..::.xx..:x..::.::.:..:::x..:.:. 27M3D15M2D15M5D56M1D22M1I12M3D18M1I36M1D7M1D66M1I112M 279/386 72.3% 389/94230402 0.0% 19/386 4.9% 1847605 NA +3251 chr4 + 190214555 17022565 17022564 17022633 69 TCCCGGGTTCAAGCGATTCTCCTCCCTCAGCCTCCCCGGTAGCTGGAACTACAAGTGCGCAGCACTATG chr4 - 94230402 18197140 18197139 18197206 76033197 76033196 76033263 67 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC--CACTGTG .:.:.........:.x...x.xxxx........::.x:...............x....:.--....:.. 60M2D7M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% -1174575 -93055827 +3139 chr4 + 190214555 17035154 17035153 17035193 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -1947161 -92283241 +3102 chr4 + 190214555 17035156 17035155 17035191 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -64593908 -29636494 +3382 chr4 + 190214555 17035156 17035155 17035198 43 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGT chr4 - 94230402 18982315 18982314 18982357 75248046 75248045 75248088 43 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT ..................x.................::..::. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -1947159 -92283243 +3316 chr4 + 190214555 17035158 17035157 17035193 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -64593906 -29636496 +3567 chr4 + 190214555 17035158 17035157 17035197 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -1947157 -92283245 +3239 chr4 + 190214555 17035160 17035159 17035200 41 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGTGG chr4 - 94230402 18982315 18982314 18982355 75248048 75248047 75248088 41 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ................x...................::x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -1947155 -92283247 +3179 chr4 + 190214555 17035160 17035159 17035198 39 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGT chr4 - 94230402 81629064 81629063 81629102 12601301 12601300 12601339 39 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGT ..........:.....x...................x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -64593904 -29636498 +3125 chr4 + 190214555 17035162 17035161 17035203 42 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGTGGGGA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..............x.x...................x::... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -1947153 -92283249 +5172 chr4 + 190214555 17046130 17046129 17046238 109 TTCCAACATAAAACCTCAAATGAATGTTTCTTGCAACCACTTTGCTTTCTCATTGAGGCTGTTCAAATGTCAGTGGTTTTAGCACTGAGCTTAACCTTTACGCATTTTC chr4 - 94230402 15180695 15180694 15180803 79049600 79049599 79049708 109 TTCCAGTACAATAACCCTAGTTAATATCTGATGCTTTCACTTTCCCTTTACATCTCTGTTGTACAAATGTCATTGATTTTAGCACTGAGCTTAACCTTTACACGTTTTC .....::.:..x.x.:.x.:.x...:.:.xx...xx:......x.:..:x...:xxx.:...x.........x..:.........................:.:..... 109M 79/109 72.5% 109/94230402 0.0% 0/109 0.0% 1865435 NA +11121 chr4 + 190214555 17059011 17059010 17059427 417 AAGCTATAAAACATTGTTCTGCTGATGCAGTAATTGCCTGACATGGCTACCTGGTTCGAACTCATGCTTAGTATGCAA--ATCT-----------GCTCCA-AGAATGCATTTGACAA------TCACTTTTCTGTCCA-----CAGAAACTGCCCCTTGACAG---AAAATATATTCCAAAAACAACTTTCAATTTTTTGCCTTTAAAACGAAAGCTTGCAAGTCCAGTGGTAGCTGAGAGCAACAACATATGCTTATAATTAGGATTACCATCAGGGAATTCAACCTTACTGAGGGAAGGGGAAGAGGTCCGCCAAGGGGGAGCAC-AAAAGCTCTCCAAAAAATAGCA---GATGAAACAGCCCAGTCGGTTTGGCTATTCCTGGGTAATGGGAGAAACTTGATTGTGAAAAACAGTGCTGGTTTTA-CTCCAGATTCTAAAGAAAT chr4 - 94230402 15184824 15184823 15185266 79045137 79045136 79045579 443 AAGCTCAAAAATATGTTTCTGCCATGATATTAGTTGTTTAATGTGGTTACTTGTCTCAAACCAAT-TTTAGTGTACAATTATCTTTAGCCATGGCATTCCAGAGACTGTTCTTTACTGCAAATTTTACTTTCCTTTTAATTATTCATGAGCTATGCCCTGATGATGTGAAATATATTCCAAAACCTACATT---TTTTTT---TCTAATACCAAGGACTGGAAGTAAATTGGTAGCCCTCAGTAACGACATATGTTTATAATTATGATTACCATCAGGGAATTCAACCTTACAGAAGGATAGAAAAGAGGCCCAAGCAGGGAAACCTCAAAAAGTGCATGGAAAAAAAGAAAGGGAGGAGAAAGCTGAAATGGGAAAACCACTCTTGGATAATGGAAAAGACTCAGTTGTAAAAATAAGCACTGGTTTCAGCTGGGGCTGCTAGAGAAAT .....xx....:..xx......::xx::.x..:...::.:.::...:...:..x:..:...:x..-:.....:.:...--....-----------::....-...x..:x:..x..x:------.:.....:..x.:x.-----..x:.:..::x..:...:::---:...............x.x..x..---......---.:...x..x..:.x:..x....xx.x.......:xxx..:...:.......:.........x...........................x..:...x:.::......:..:xxx....::.x.x.-.....:x.x:x:.....x..x.---..x..:.x...:x.:x:..xxx::.:.:..:...:......:.:.:...:::....:....xx..::.......:.-..xx:.x.x...:...... 65M1D12M2I4M11I6M1I16M6I15M5I20M3I24M3D6M3D125M1I22M3I76M1I19M 278/410 67.8% 443/94230402 0.0% 40/410 9.8% 1874187 NA +3022 chr4 + 190214555 17063311 17063310 17063358 48 TCAGAGGAAAGTAAGTCATTATCAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 11408532 11408531 11408579 82821824 82821823 82821871 48 TCTGAGGAAATTAAGCCATAGTCAAAAAAAAAAAAAAAAAGCCAAAAA ..x.......x....:...x:...................:xx..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 5654779 NA +3446 chr4 + 190214555 17089367 17089366 17089506 140 TAAAAAAAAAAAAAAAAAAGAATCAGAAGAAAGAAAAGAAAAAAAAAGAAACTTAGAGCGATG---------TCTCTTTATTCAGAAATCTTAA--TAAAAATTTTAAAAGCCTATAAAATATACATATAATCTGTTCCATCTAAAGTTAA chr4 - 94230402 65617536 65617535 65617676 28612727 28612726 28612867 141 TGGAAAAAAAAAAAAGAAAGAAACAAAATAGTTAAAGAAAAAGAGCAGAAACTTAAAGATACATGCTTTCACTGTCattatatatatatcttaaattaaaaa----aaaa------aaaaaaaagatatattCTCTCTCATTCAGATCCAA .::............:......x..:..x.:xx...::....:.:x.........:..xx.::---------.x..x....x:.x.x.......--......----....------....x.x.x.....x...x.::...::.:.x::.. 63M9I22M2I6M4D4M6D35M 92/130 70.8% 141/94230402 0.0% 21/130 16.2% -48528169 -45702233 +3173 chr4 + 190214555 17102339 17102338 17102416 78 CTGCCTGAACCTGCACAGAATGCTGCTTTGCCTGTTTTTGTTGTGGTTTGTTGTTTTGTTTTGTTTTCTTACATTTTC chr4 - 94230402 55819415 55819414 55819488 38410915 38410914 38410988 74 CTGACTGGCCCTG----ATGTGGTGATGTGCTTTTTTTGGTGGTGGTTTTTTGTTTTGTTTTGTTTTTTCTCAGTTTC ...x...:x....----:x:..x..x.x...:.x....x..x.......x.................:.:x..x.... 13M4D61M 56/74 75.7% 74/94230402 0.0% 4/74 5.4% -38717076 -55513326 +3595 chr4 + 190214555 17105328 17105327 17105410 83 CTGCAACCTTTGCCTCCTGAGTTCAGGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:...:.....:.::x...x.xx.x........::..................x....--:....::.. 72M2D9M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -1091798 -93138604 +3139 chr4 + 190214555 17111894 17111893 17111933 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -1870421 -92359981 +3102 chr4 + 190214555 17111896 17111895 17111931 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -64517168 -29713234 +3413 chr4 + 190214555 17111896 17111895 17111937 42 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..................x.................::..:. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -1870419 -92359983 +3316 chr4 + 190214555 17111898 17111897 17111933 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -64517166 -29713236 +3467 chr4 + 190214555 17111898 17111897 17111936 39 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ....................................::. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% -1870417 -92359985 +3102 chr4 + 190214555 17111900 17111899 17111935 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -64517164 -29713238 +3475 chr4 + 190214555 17111900 17111899 17111939 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................:... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -1870415 -92359987 +3086 chr4 + 190214555 17123441 17123440 17123530 90 AGTACATATATATATAATGCATATA-TATACACAT-TATATATACATATACACATATATGTATATACGTATACATACATATACATGTATATA chr4 - 94230402 17520720 17520719 17520811 76709592 76709591 76709683 92 AGAATATGTTCTTAAAATGCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ..x.:..:.x:x..x.......x:.-.xx...x..-....x.:...x.........:....:x..:.x.:..:.x...:..:...:...... 25M1I9M1I56M 64/90 71.1% 92/94230402 0.0% 2/90 2.2% -397279 -93833123 +32508 chr4 + 190214555 17167788 17167787 17169176 1389 AAACCCCAAGTCACATGATTTTGTATTTAGAATATTAATTTTCCCTAGGTCATGCAGAAACAGCGATACTTTCCTTAATGAAATGCTCTTGTACTAGTTTCTATTTGTATGCAAAACACATCATT-GGTTTAACATATTGAGACAATCTCCCCTACCCATGCACACCCATATCTGCCTAGCCGAAGAAGGGGAA-AGGCTTCTGATTTATTACACATAAACAAAATGAATAAGATAACATTTTATTAGTTAGAAACCATTATAAAAACAGCAATAAAATGGGGCAGTACAAGTGGAAGACGCCCTTATCAATAAATCCTCAGAAGTTTAGGACCCTGGTGCATGTTGTAATAATAAAAAAGATAATTAAAAGGATCGAATTGCACAGCTGTATCATTTTATCAAGAAGCAGCCCTCTAACAATAGAAAACATCAG---GGCAGTAACAGTTGGTGAGTCTCTAACCTTTTT----AAAAAGGAAAGGTATTTGAGATTCAAGTTGTTTTAGCTATTGTGAGAAGAATCCATGTTTACGTTGTGTCGCATTGAAACATGCAAATCCAGGCAAGAAA--------TGGCTTTCCTTTAAAATCAGTATCTTTATGAGTCTTG---------TTTCTTGTGCTGAGCAGTAACTGGCTTTATTAAATTAGCCATATCCATCCTATCAATTAT----------AGCTGATATT--ATAACTAACAACTGTAGGTGA-----------GAAAGACAGT------------------------TTCCTTACTTTTTGTCTAAGAAAGTCTTGGGTTTTCTTCCCTTGACTGAGAATCTTCATTTTGTCTTAGAAAATCCTTATGACACATTGCAAATACTTTTTATACAAAGACATCACAAGGAAACACAGAAACCTCAGAGCTTTTTCATTTCCCAG----------AGAGCTGTAGTCAGTTTTTAGAAAGTAAATTGTGTCCTCTACCCTCCCCTCAACTCCCTCCAGGTCAATGTTTCCCCTCCCCCATCCTGGTCAGTTTAATAT-GAGTCACTGCCTGGGCTTTGTTGTATGGAATAAA---ATAACATATTCTCCTGGGAGTCAGTTCATGCAAAACACT-CCCTGCT--GAGAGTGGAAATTTACCCATAAGACATTCTTCCAGCAGCAAGCCCCTGGAGGAAACCTGACCAGAATGTTTAAAGACTTGAGGAGCTCGG---TCTCCTTAACTCCCTCAAAATTTCTCAGAGAAAAAAAAAAACACACACACACACATATTTAAGGTTTATAACACCTG---GTGACAAAAGACACAGTGAGATATGATGTTATTTAGAAAGAAAA-CTGAAAATG-------AGTAGATTATTTCCAATATTTCGTCTGCCACTCTGTCTTCTACCACGATTTCTATTC---TTTCTATTCTCCCTTCCCATTTTGGTTTATGGTCACTCTGCAGTCGTTCCATTGATCAATGCATGAACTCT chr4 - 94230402 15207001 15207000 15208373 79022030 79022029 79023402 1373 AAGTCCCATGTTACTTTATTTT--ATTTAGGGTATTAATTTTACTTGGGTCACAGGCAAATAGCTACACTTTCATTAATGAAATGCTCTTAAGCTAATTTCCATTTGTATGCAAGCAACATCATCAGGTTTAGTACATGCACACAGTCGTACATACTTAT----ACTGATATCTGCATGA--GAAGAAAGCGAACAGGCTGTTGATTTATTACACACAAATTGAATGAATAAGATAACATTTTATTAGCAAGATACCATTATAAAAATGACTATAAATGGATACAATACAAGTGGTATATGGCCTTATCGGTAAATCTACTGTATGTTAGGA-CCTGGTACATGTTGTAAT----AAAAAGATAATTAAAAGTATTGAATCACAGAACCATACCACC--------AAATAGCCCAGTAACAACAAGCTCCATTAGTGAGGCTGT--------GTGTGCTGCCAGCCTGGCTCAGAAAAAATGAAAAG-----AGAAGTCAAGT--TTTTAGGAAACGTAAAAAA-------GCCTACAGT------CCTAGCAGGGAGGGAATAAAGAGAGGGAGTATTTTTCTGACTTTCCCTAAAAG--AGACTCAAAAAATGACTTGACACGGGGCTTTCTTGT-TTGAG-------GGGCTTTATC---TCAGAC-------CCCCAACGAGTGTGTTTCTGGTAAGGTGATATTCACTCTTTAACTGCTGTAAGTAATCTAGCACACTGCAAAGCAGTGCACACATTTCAGAGGCttctttctttctttctttctttctttctttctttctttctttctttctttcttt-----ctttctttctttctctctctctctctctctctctttctctctttctctctttc--------------------------tctc---tctctttttttttctAGTTTTATGACTAGCGCTGT--CTGGCTCTGGAAATACACACTGACTTCTCGTCCCTCCCCC---TCCCCCTTGGGTCAGCTGCTTCTCTCCCTCCCTCTGGTCAGTTTAAGATGGAGATGCTGCCTAAGCGCCGCTGTACAGAATAAGCACACAACATTTTCTCCTGGGAGTTGGTTCATGCAAAACACTGCCCCGCTGAGAGAGTGGAAATTTACCCATAAGACATTCTTCCAGCAGCAAGACTCCAGAGGAAACCTGATCAGAATTTTTAAAGACATGC----CTTGACTTTCTCTCTAATTCCTTCGAAGTTTCATGGGG---AAAAAGAATACAAAC---CAAATGTTTAAGGTTTGTTATGCCTGCGCTTTACCAGAAACAGACTGAGATATAGTCTAATTCAGGGATAAAAGCTGAGAAGAAGACGGCAGTGGATTATTTTCAATAGATTTTCTGCTACTATGTCTTCT---ATGATTTCTTTTTGTGTTTCTTTCCTCCTTCTGACTTTCAGTTTATAGT--CTCTGCAGCACTTCAGCTGATCAATACATCAGCTCT ..::....x..:..x.x.....--......::..........x.:.:.....::x:x...:...x.:......x................:x:...:....:............:xx.......:-......::.:..xx.x...:..x:x.x...::..----..:x........x.::--......:.x...-.....x:..............:...:x:.........................:x...x.............:::.x.....xx.:x:..:.........x.x.:.x.......::......:x.x.x.xx......-......:...........----.................x..:....::..x.:.::..:..::--------..::.....xx......:.::xxx...:..---...x..--------...x.::x.:.:...xx:.----.....x....:.-----:::.x......--......xx.x:..:.:..:-------.::...:x.------.x.x.x.:x:x.x:...xx..:x.:.:.:--------..:......:.x...:--..xx..xxx.x:x.x....---------........-:....-------x........:---.:..x.-------:..:.x.:.x.:.----------..x.......--x.xx:....x:.....:..:.-----------.x..::....------------------------..:...x....:.x...xxxxxxx.:.:xxx:......:.:..xx:.-----::...x..:.x...:xxxxxx..::.x.xx.x.x..x:xxx.x::.:.:x.x.--------------------------:...---x..:...:x...:.:..----------..x.....--:::.:.:.x::..x::.x.:..xx.:...xx........:---::...::::.....::xx:.:.:.....:.x::.............x..-...x::......::..x::.:....::......:---.:.....x.............::................-...:...--..........................................x.:.::............:......x.........x..x----..:.:---....::...:...:..:..:....x::.:.---.....:..:...x..---..x..:..........:.x.::....---x.x..x.:.:...x.x........::.x.x...:..::.x....-....:..x:-------...:........:.....xx.:x.....:...x........---.:.......x..:---.....x.:....:.::xxx...::......:..--........:xx...x::........:...x.:.... 22M2D101M1I34M4D16M2D12M1I137M1D18M4D42M8D30M3I6M8D19M4I12M5D11M2D19M7D9M6D29M8I16M2D19M9I8M1D5M7D10M3D6M7D13M10I10M2I21M11I10M24I47M5D53M26D4M3D17M10I8M2D40M3D49M1I34M3I39M1I7M2I81M4D5M3I30M3D15M3D26M3I44M1I9M7I41M3D13M3I33M2D36M 891/1266 70.4% 1373/94230402 0.0% 230/1266 18.2% 1960787 NA +20845 chr4 + 190214555 17172925 17172924 17173224 300 TCTTTTAACAGTTTGTACATTTTCATTCCTTGGTAAGATATGA-----------------------TATAAATAAGACCATTATTCAGAATGAGAATTTTCTCTACTAACATCATCACCATTTGCAGCATAGAAGACTAAATAAATATCTCCCATGAGTGACTAAATGCAAAATAAAAAGTAACCACTCAACTTTAATAGTTTAAAAAATGTTATTAAACATAATGGCTCCTTGACATTTAAGTAGCACTGTGTTTTAGGTGATCTTCATTTTTGAAGAACTACTTTATTTTCATCTTAAATATTGATGGCAAATCAAGTTCT chr4 - 94230402 15214735 15214734 15215056 79015347 79015346 79015668 322 TCCCTTAACAGTTTGTGAATTTTCATTCCTCTCTAAGATATGAATATATTATACTAAAAGATATTATATAAATGAGACCATTATTCAAAATGAGAACCTTCTCCACTAACAGCATCACTATTTGCAGAGTATGAGACAAAATAAATGTCTCCCATGAGTGACTAAATGCAAAATAAAAAGTAACCACTCAACTTTAATAGTTT-AAAAATGCTATTAAACATAATGGCTCCTCAACATTCAAGCAGCACTATGTTTTAAGTGATCTTCATTTTCAAAGAACTATTTTATTTACATTTAAAATATTGATGGTGCATAAAGTTCT ..::............:x............:xx..........-----------------------.......:.............:........::.....:.......x......:........x:..x:....x........:........................................................-.......:....................::.....:...:......:.......:..............::........:.......x...:.x............::x..x....... 43M23I137M1D119M 262/299 87.6% 322/94230402 0.0% 24/299 8.0% 1958190 NA +3367 chr4 + 190214555 17182214 17182213 17182261 48 TTTTTTTTTGTTGTTGTTGTTGTTTTGTTTTTTTTTTTTGGTTTTTTT chr4 - 94230402 44858315 44858314 44858362 49372041 49372040 49372088 48 TTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTT ................:..:....x....x......x..x........ 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -27676101 -66554301 +7776 chr4 + 190214555 17204709 17204708 17205392 684 CCAAGAAAATACCTAGCAATCTTTCAGCTACAGTAACAGTAATCCCAAA-CCCACTACAGCATCTAATTGAAATATTGATTCTTCAGTTAGATCTCTAACTTAAAATTCCAGAG--------CAGAGAGCTCCCCACCACATACACCCCTTCACAGAATCACCGCACAG-AGCACATAGTGTTTCCTTCACATTAAGCTTCCCCAGGCTTT-----CATTTCAATTAGTCATAAAAAAAA--ATCA--AGAAGTAAAGTATTGTCGGAAAGATTCCAGTCAGTATTTTATTGCCTGAAACAGTTCTCAAGATTAACCATTTCATAGCAGAACGGGAGTTCTGCAAAAAGAGCAATGCCTTT--------------GTTTA----CAGGTAGGACACTAAGGATAAAG------TAAACAAAGTCTACTTTCCTGTCAGTGACTTATCCA-ACA-----------TGTTTGCATTACACAATCTC-------------------------ATCTG---TGACATTAAAATTTAA--------------ACAAGCACTCAATTTGTGCCAAGAAATTACCAC--AAATCCAGCTTTTGCTATCCTTGTATTTTCATTTAGATTCTAAGAGCAACAAAACCCCTTGATGTTATTATCTCCTATGAATACTAATTATCTCACTACAACTGTGTGTCTGCTAATCTTCCAGAAATAATGTGAGAATTACTGGGATGCGATAGGAGCAGAATGGAATTAGAAACCTATTTTGTGAA---TTTGTCAAAACTA chr4 - 94230402 15222613 15222612 15223344 79007059 79007058 79007790 732 CCAAGGAAA------GTAATCTCCTGGCTATGCTAACAGTCATCCAAAAACCTACCATATAATCTAATTGAAGTATCGATTCTCAACCTAGAGCTTCTATTTAACATTCTGGAGAGAAAGAAAAGAGGG------AGAAAAAAAA----TTTACAG-------GCACAGCAACACA-AGTGTTC------CACAAAGCTTCCTTTAGCTTCTGTTGCTTTACATTCAGTTATCATAAAGATTATCACTGTAAATAATTTCTTTTCTGCAAAACAACAAT-ATCCTTCCCCCCTCTGAAATGCATCCT--------CCTTTTTATTTCCAGCTGCAAATTCTTAAACAGAGAAGATACATTTTCCTTAATAATAAAGTCTAACTGCAAGGAGGAAGAGAAGAATGAAAACTGCTCCAACTCAGCATCACCTCCCGATACTTATGTGTCTAGACAGCTGGTAGAACTTTTGGTATGACAGAATCTTTCTCAGCTTTTTTTTTTTTTTTTCAATTTGGTTTGGTTTTTTAATTTAAGAGGAGAATAAAATAGAAGCATGCAGTTTGCATTTGAAAAATTCCATCAGAAACCTACTT----TATC-------TTTCGTTCAGATTGCAAGATCAACAAATTCCCTTGATA--ATTCTTTTCTATGAATATTAATTAAGTTACAACTACAGTGTGTTTACTAATCTATTATAAATAATGCAAGAATTATGGGGACAAAATATTAGTGGCACGG-ATTAGAGA-ATGTTTTTTGAACGTTTCACCAAAAATA .....:...------.:.....::::....::x.......x....x...-..:..:.:.xx...........:...:......:x.x:....x..::x.:....x....::...--------x....:.------.xx.x.x.x.----..:....-------......-.:....-......:------..:x........::x:....:-----.x..x..x.:...:..x.x...:.--....--:x..:...xx.x..x..x.x..:.:xx..:.-.x:x..::x::x:......::xx..::--------..x...:..xx.x::x:.x:.:....xx..x.::::x:..:.x...--------------..:..----..:.x....x:xx...:..:..:------:x...xx..:x.xx::...:.x:.x.x.:x.:..:.-...-----------.x..x.:..x...x.....:-------------------------..:..---..::x..xx.......--------------.x.....:x..:....::::x::...x.x...:--:..x..x:...----....-------....:..:.....x:....x.......x:........:--...x.:.:.........:......xx.:..x..x..x......:.:.......x::.x........::.......:x....::x:...xx..::.x.:..-......:.-x.:....x....---..:::.....x.. 9M6D34M1I64M8I7M6D10M4D7M7D6M1I6M1D7M6D21M5I24M2I4M2I31M1D27M8D46M14I5M4I23M6I36M1I3M11I20M25I5M3I16M14I33M2I11M4D4M7D38M2D100M1D8M1D12M3I13M 417/630 66.2% 732/94230402 0.0% 156/630 24.8% 1982096 NA +7966 chr4 + 190214555 17204709 17204708 17205392 684 CCAAGAAAATACCTAGCAATCTTTCAGCTACAGTAACAGTAATCCCAAA-CCCACTACAGCATCTAATTGAAATATTGATTCTTCAGTTAGATCTCTAACTTAAAATTCCAGAG--------CAGAGAGCTCCCCACCACATACACCCCTTCACAGAATCACCGCACAG-AGCACATAGTGTTTCCTTCACATTAAGCTTCCCCAGGCTTT-----CATTTCAATTAGTCATAAAAAAAA--ATCA--AGAAGTAAAGTATTGTCGGAAAGATTCCAGTCAGTATTTTATTGCCTGAAACAGTTCTCAAGATTAACCATTTCATAGCAGAACGGGAGTTCTGCAAAAAGAGCA-ATGCCTTT--------------GTTTA----CAGGTAGGACACTAAGGATAAAG------TAAACAAAGTCTACTTTCCTGTCAGTGACTTATCCA-ACA-----------TGTTTGCATTACACAATCTC-------------------------ATCTG---TGACATTAAAATTTAA--------------ACAAGCACTCAATTTGTGCCAAGAAATTACCAC--AAATCCAGCTTTTGCTATCCTTGTATTTTCATTTAGATTCTAAGAGCAACAAAACCCCTTGATGTTATTATCTCCTATGAATACTAATTATCTCACTACAACTGTGTGTCTGCTAATCTTCCAGAAATAATGTGAGAATTACTGGGATGCGATAGGAGCAGAATGGAATTAGAAACCTATTTTGTGAA---TTTGTCAAAACTA chr4 - 94230402 15230892 15230891 15231623 78998780 78998779 78999511 732 CCAAGGAAA------GTAATCTCCTGGCTATGCTAACAGTCATCCAAAAACCTACCATATAATCTAATTGAAGTATCGATTCTCAAGCTAGGGCTTCTATTTAACATTCTGGAGAGAAAGAAAAGAGGG------AGAAAAAAAA----TTTACAG-------GCACAGCAACACA-AGTGTTC------CACAAAGCTTCCTTTAGCTTCTGTTGCTTTACATTCAGTTATCATAAAGATTATCACTGTAAATAATTTCTTTTCTGCAAAACAACAAT-ATCCTTCCCCCCTCTGAAATGCATCCT--------CCTTTTTATTTCCAGCTGCAAATTCT-TAAACAGAGAACATACATTTTCCTTAATAATAAAGTCTAACTGCAAGGAGGAAGAGAAGAATGAAAACTGCTCCAACTCAGCATCACCTCCCGATACTTATGTGTCTAGACAGCTGGTAGAACTTTTGGTATGACAGAATCTTTCTCAGCTTTTTTTTTTTTTTTTCAATTTGGTTTGGTTTTTTAATTTAAGAGGAGAATAAAATAGAAGCATGCAGTTTGCATTTGAAAAATTCCATCAGAAACCTACTT----TATC-------TTTCGTTCAGATTGCAAGATCAACAAATTCCCTTGATA--ATTCTTTTCTATGAATATTAATTAAGTTACAACTACAGTGTGTTTACTAATCTATTATAAATAATGCAAGAATTATGGGGACAAAATATTAGTGGCATGG-ATTAGAGA-ATGTTTTTTGAACGTTTCACCAAAAATA .....:...------.:.....::::....::x.......x....x...-..:..:.:.xx...........:...:......:x..:...:x..::x.:....x....::...--------x....:.------.xx.x.x.x.----..:....-------......-.:....-......:------..:x........::x:....:-----.x..x..x.:...:..x.x...:.--....--:x..:...xx.x..x..x.x..:.:xx..:.-.x:x..::x::x:......::xx..::--------..x...:..xx.x::x:.x:.:....-:...x....x.-..:.x...--------------..:..----..:.x....x:xx...:..:..:------:x...xx..:x.xx::...:.x:.x.x.:x.:..:.-...-----------.x..x.:..x...x.....:-------------------------..:..---..::x..xx.......--------------.x.....:x..:....::::x::...x.x...:--:..x..x:...----....-------....:..:.....x:....x.......x:........:--...x.:.:.........:......xx.:..x..x..x......:.:.......x::.x........::.......:x....::x:...xx..::.x....-......:.-x.:....x....---..:::.....x.. 9M6D34M1I64M8I7M6D10M4D7M7D6M1I6M1D7M6D21M5I24M2I4M2I31M1D27M8D26M1D11M1I8M14I5M4I23M6I36M1I3M11I20M25I5M3I16M14I33M2I11M4D4M7D38M2D100M1D8M1D12M3I13M 423/629 67.2% 732/94230402 0.0% 158/629 25.1% 1973817 NA +9480 chr4 + 190214555 17246619 17246618 17246838 220 GAGTTTGTTCAGATTTTCTCACATTTTCTTTGCCTAAAGAAACATTTGGTTATCAAAATATGTACTTCATATTAGCTCAGGAAACCAAAAAG-------------GGGGGAAAAAGACCTTCATTCTGTTGCTGCAATAAAGGTTTCCTTCTCTAGCAATAATCAACG----ATAATTAAAATCGTTCAGACTGCTGAACTAATTTTCAGACTGGAGGTTTCTTCCTGTAGCAACAC chr4 - 94230402 15242295 15242294 15242529 78987874 78987873 78988108 235 GAACTTACTCAGATTAACTTTCCAATTATTTACAGAGAACACCATGAGGCTATCAAAACAC--ACTGTGCTGTAGCCCAGAAAAACAGGCAGTGTGGTGGGGGGGGGTGGAAGGGAATCAGCATTCTGGTGCGGTAATAAAGGTTCCTTTCTCCAATGATAATCAACTCTGCATAATTAAAATAGCTCAGACTGCTGAACTAATTTTCAGACTGGAGGTTTCTTCCTGTAACAACAc ..::..::.......xx..:x.xxx..x...:.xx.:.:x.x...xx..:........:.:--...x:::xx....:...:...x..::x..-------------..x....::::.:.xx.......x...x.:..........:.:.....:.:::.........x----...........x.:............................................:...... 61M2D29M13I63M4I65M 161/218 73.9% 235/94230402 0.0% 19/218 8.7% 2004324 NA +17970 chr4 + 190214555 17246619 17246618 17247025 407 GAGTTTGTTCAGATTTTCTCACATTTTCTTTGCCTAAAGAAACATTTGGTTATCAAAATATGTACTTCATATTAGCTCAGGAAACCAAAAAG-------------GGGGGAAAAAGACCTTCATTCTGTTGCTGCAATAAAGGTTTCCTTCTCTAGCAATAATCAACG----ATAATTAAAATCGTTCAGACTGCTGAACTAATTTTCAGACTGGAGGTTTCTTCCTGTAGCAACACTTACAAGCAAAGTTTCTACTGTGAATGAATTTAATCAT-AGTCTAATTACAATTTTAATGAATATCCCTGGCCCTGCATGTAAACTTGCACTCAAAGGCTTTGCTATCTGTTAGGGTATTTTAAGGTCTTTTCATTTTTAATATAAAGGAATGTGTTGGCAAAATGACAGTGTAGAAAAGAAATCTTC chr4 - 94230402 15244316 15244315 15244732 78985671 78985670 78986087 417 GAACTTACTCAGATTAACTTCCCAATTATTTACAGAGAACATCATGAGGCTATCAAAACAC--ACTGTGCTGTAGCCCAGAAAAACAGGCAGTGTGGTGGGGGGGGGTGGAAGGGAATCAGCATTCTGGTGCGGTAATAAAGGTTCCTTTCTCCAATGATAATCAACTCTGCATAATTAAAATAGCTCAGACTGCTGAACTAATTTTCAGACTGGAGGTTTCTTCCTGTAGCAACACTTACA--CAAAGTTTCTACTGCGGCTGAATTTAATCGTGAGTCTAATTACAATTTTAATGAATATCTTCAGCGCTGCATGTAAACTTGCACTTCACAGTCTTGCTATC----AGAGCAGTTTAGAAGCTTTCTGCATTTAATACAAAGTATTGTTCTGAGAGAGGCTCAGGGTAAAACAGTACTTTTC ..::..::.......xx..:x.xxx..x...:.xx.:.:x.x...xx..:........:.:--...x:::xx....:...:...x..::x..-------------..x....::::.:.xx.......x...x.:..........:.:.....:.:::.........x----...........x.:........................................................--..............:.:x...........:.-...........................::::..x...................:x.x:.::........----..:.:.x....:::x....::::x.......:....x.x...x:..:x.:.:xxx...x...:..x..x.x.:... 61M2D29M13I63M4I70M2D31M1I69M4D76M 298/399 74.7% 417/94230402 0.0% 26/399 6.5% 2002303 NA +3080 chr4 + 190214555 17250174 17250173 17250221 48 ATGTAGAAACCTAGATGGGATATATATATACACACACACACACACACA chr4 - 94230402 21908454 21908453 21908501 72321902 72321901 72321949 48 ATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACA ..:.x:...:x.....x:.........:..:................. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -4658280 -89572122 +3162 chr4 + 190214555 17287353 17287352 17287425 73 CCTGTCTCCTTGCCAGTAGACTTGCAAT--AAACCTTTCTTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAACCTG chr4 - 94230402 80286810 80286809 80286882 13943521 13943520 13943593 73 CCTGTCTACTTGGTCATGTACTTTCAATCTAAACTGCTCTTTATGAAAAGAAAAAAAG--AAAAAAAAAAACCTG .......x....x:x:.:x....x....--....:x:....xx......:.......:--............... 28M2I28M2D15M 56/71 78.9% 73/94230402 0.0% 4/71 5.6% -62999457 -31230945 +3082 chr4 + 190214555 17287379 17287378 17287433 55 ATAAACCTTTCTTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGTCCTTTG chr4 - 94230402 32077883 32077882 32077937 62152466 62152465 62152520 55 ATATACTTTTTTTGCACAGGGAAAAAAAAAAAAAAAAAAAGGACCTAATTCTCTG ...x..:...:....xx.:::...................::....::.:..:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -14790504 -79439898 +8995 chr4 + 190214555 17288236 17288235 17288483 248 CATTAAGGGAAACAAGCTAGAAATTTTTCATGCTTTCCTACATTCTGTTGAGCTTGCAGTCTTGCTGGAAGGAGGAAGCCAAT-CTCAGGTGCTGAACAACAAATTGCTTATTGGAACAGCTGCTGCTTTTGGCTGAGTAGGCAGGACACTCAAGGGTGGCATTTTCTTGCCATGATGCTGCAGCCAGTTAAAAATTAGTGTTAGGGACAGAAAATAAGAAGCAAAAGGGAAATCATCAGATGATTTGA chr4 - 94230402 15265977 15265976 15266210 78964193 78964192 78964426 234 CATTAGGGAGAAAGAGTTATGAAACTT-CATGCTTTTGTACATTTTGTTGAGTTTGCAATCCTGGTTAAAGGAGAGAGCAAATTCTCAGGTGCTAAACATCAGATTGCTCATTGGAACAGCTGCTGCACTGAGCTGAGTAAGCAGGACATGCAAGGAGGGACTTTTGCTA------------GGCTAGTTTTTGACCAGCTTTAGTGCTAACACTTACAAATTAAAAAGAAA--TATCTTATGATTAGA .....:..::..x:..:..x:..x:..-........:x......:.......:.....:..:..x.x:......::...x...-..........:....x..:......:.................x:.x:........:........:x.....:x..xx....x:.:------------:..:....xxx:.::..:x....x.x:.:x.xx..x:..x:....:.:..--:...xx......x.. 27M1D55M1I86M12D50M2D15M 166/233 71.2% 234/94230402 0.0% 16/233 6.9% 2022259 NA +16293 chr4 + 190214555 17289924 17289923 17290321 398 TGTCTCCTTTGCACTTTTGCTCAACTTTAGCATAAATTTATCAAAGAAGGTAGCAAATTGCAAGTTGATCAGTTTCCCCA-----CTTTAACACGACAGGTCATAATGGCTTTGTTCCTTGGCCATACAGGCCACGGAGCTGTTTTTACATATTAATGTGACAGGACATGGAGAATCATTAATAACTATAACAAGATAAAGGGAATTAGTTAAAACTTAATTAAAACCACATGGATAACAAGTAGAACACTGTAC--GTTTAGTATCTTGAAATCTTTGTTCCTGGTTTGACCAAACAAAAAGATG-----------CTTTGTGGAAAGCACAAGGTCCCCAATTAAT-------------CCCTGGTCTAAAATAATCAGATCTAAATCAGAATCAAGAGGAAATGAAATTGGTGATTCTGATACATG chr4 - 94230402 15269975 15269974 15270394 78960009 78960008 78960428 420 TGGCCCTTTAGCACTTTTCTTCACCTTTAACATAAATT-ATCAAAGAAGGTAACAAAATACAAGTTGATCAGTCTCTCTAGTTTAATTTAACAAGGCAGGTCATAAAGGCTTTGTTCCTTGACCAGCCATGCCAAAGTGCCGCTTTCACATATTAATGTGACATGACTTGTACAGCCA-TAATTACTTTGACAAGATAAAGGGAATTAGTTAAAACTTAATTAAAACCACATGCCTTACAACTGTGGCACTGTACATATTTAGTAACTTTACTTCTTTATTCCCGGTTTATCAAAAGGGGAAGGGGTCCACGTGAATCTTCCTGG-TATTACAAGTGCATCAATTAAGAAAGAAAATTAAACACTGATCATAAATAACCAGATAAGAAACAAAACTGAAAGAAGACAAG------TACTCCGATTCATG ..x.:.:..x........x:...x.....:........-.............:....x.:.............:..:.:.-----x.......x.:..........x..............:...xx..x....x:.x..:.:...:................x...x..x.x.::..-....x...x.:...........................................xx.x....x.:x::........--:.......x...x.xx.....:....:.....:x.x...x:::...:x.-----------...:x...-x.x:.....xx.x:.......x-------------.x...:..xx......:.....xx:..x..:..:::.:..:.:.::.:------x.:..:...x.... 38M1D41M5I93M1D76M2I49M11I8M1D22M13I48M6D14M 295/389 75.8% 420/94230402 0.0% 40/389 10.3% 2019949 NA +4257 chr4 + 190214555 17311721 17311720 17311827 107 CTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATACACACACACACACACATACACATATATAGATGTATATATGTATATATACTATAT chr4 - 94230402 88147163 88147162 88147264 6083139 6083138 6083240 102 CTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-----CATATATAGGGAGAAGCATATATCAACACTACAT ..:.:.:.:.:.:.:.x..:..:..x:x..............:.x.:.:...:.:.............-----.........:x:x.x::..:...xx.:....:.. 68M5D34M 71/102 69.6% 102/94230402 0.0% 5/102 4.9% -70835442 -23394960 +3222 chr4 + 190214555 17311736 17311735 17311803 68 TATATATATATATATATATATATATATATATATATATACACACACACACACACATACACATATATAGA chr4 - 94230402 8395805 8395804 8395872 85834531 85834530 85834598 68 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA ..x.:..:...x..:....:...::x..:..xx...:...............x.:...x..:x...:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 8915931 NA +3398 chr4 + 190214555 17311737 17311736 17311798 62 ATATATATATATATATATATATATATATATATATATACACACACACACACACATACACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...x.:..:...x..:....:...::x..:..xx...................x.....x.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 8915933 NA +3230 chr4 + 190214555 17311742 17311741 17311824 83 TATATATATATATATATATATATATATATATACACACACACACACACATACACATATATAGATGTATATATGTATATATACTA chr4 - 94230402 48167038 48167037 48167117 46063286 46063285 46063365 80 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG---GTAAATGTGCCA .:.......xxx:......:......x.:.....::x...::::.x.........:..:.x......:---...x..:.:.:. 68M3D12M 56/80 70.0% 80/94230402 0.0% 3/80 3.8% -30855296 -63375106 +3043 chr4 + 190214555 17311757 17311756 17311823 67 ATATATATATATATATACACACACACACACACATACACATATATAGATGTATATATGTATATATACT chr4 - 94230402 66904847 66904846 66904913 27325490 27325489 27325556 67 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATT ......:..::..:.:.....:.............:x:.x:.x:..:......:.xx:...:::.:. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -49593090 -44637312 +3091 chr4 + 190214555 17312351 17312350 17312406 56 TCCAATTCTGTTGATGTCCTGGTTTTTTTGGTGTTGTTTGTTTGTCTGTTTGTTTT chr4 - 94230402 33770291 33770290 33770346 60460057 60460056 60460112 56 TTCACTTCTATTCACAGTCAGGTTGTTTTGTTGTTGTTTGTTTATTTGTTTGTTTT .:..x....:..x.::x:.x....x.....x............:.:.......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -16457940 -77772462 +26703 chr4 + 190214555 17317542 17317541 17318173 632 GAATAAAATATGTTCAAAAGCAATTAATAAGCAATTTTTATCTAGGAAGTGGGTGATTTT-TGCACAAGGGGGAGAGAAATGCTCCAGGCTTTGCCTCATCTCCTAGAAGCATCCCATATTCTTAGATGTGACGTTGCCTTGGTAACCACAACTTGGTGACCTCGTTATTTCAACCTAATCCTGCTTTGAAATTATAGTTGCTCCACCCTTTTGCCTGGCCAGCCTGATAACATAATCATTGTAAATGAGGATGAGAAAAAAACAGCAGGATATAGTCCCTCCGGTGACACAAGACCAGTCTCACCTTATCATGGAAATAGACGAACAATTAAACGGCATGAATCTAAAACCCTAAAAGTGGATTTTCTTATTTTTATATGGCTTCTTATGCTTATTTTC--AAAACCTACTGGT------------GGATTCAATGTAGCAGGGTATCTTGATATTACTATATGAAAATGGAAAATTCCTATT----------------TCTGTTAAAAAAAAAGAGATAAACTGT--CAAAGGTGAAGTT---CTTAATTATGCATGTGTTTTGCCCAACAGCTGAATAGAAACC--------------AGAATCAGAAAATAATTT-TTTAACAAGTAGACTGGCAGTATCCAGGTTT--GTTTGTCCAGCTTAACTTCCTCTGGCTAAAGC chr4 - 94230402 15293061 15293060 15293703 78936700 78936699 78937342 643 GAAAAAAAAATATTTAAAAGCAATTAAGCAG----TTTTACAGAAATAGTCTGGGATTTTGTGCA-AAGGGAGAGAGA----CTCCAGGCTT-GCCTCATCTCCTAGAAGCATCCCATATTCTTAGATGTGACGTTGCCATGACAACCACAACTTGGTGACCTCGTTATTTCAACCTAATCCTGCTTTGAAATTATAGTTGCTCCACCCTTTTGCCTGGCTAGCCTGATAACATAATCATTGTAAATGAGGATG-GAAAAACACAGCAGGATACCATTCCCCCAGTGACATGGGACTAGTCTCACCTTATCAGGGAAATAGACCAACAATTAAACTGCACAAATCTAAAAGACCGAAAGTAGATTTTTTT---------TTGTTTGTTATTCTGTTTTGCAGAAAATCCAATAGCTTGTCAGTGCAGGGATTCAGTCTGGAAGGGGGGCTT----TTG------------GGGAAATTCCTTTTAATTTAATTTAATGTCTTTATCAGGAAA------TTAAACGGTAATAAGGGGGTAGTTCTCCTTAATTATGTATTTGTTTTGACTAACAGCTAACGAAAGATTTAGGATGTACACAAAGAGTCAGGACAGAACTTGTTTAGCAAATCAGATAGGGGGGTTAGGGTTTAGGCTCGCCTTGCTTTATTTAAACTGGTTAAAGC ...x....x..:..:............xx..----.....:xx.::x...xx.x......-....-.....:......----..........-..............................................x..::............................................................................:.................................-......x...........:x:.:..:..:......:::...:...............x..........x...........x...::.........xx.::.....:......:..---------.x.:..x....x..xx...x.--....:.:.x.:.:------------.......:.x.:.x....x:x...----..:------------..:........x..----------------.:.:.:.::...------x.....x..--:..:..x.x....---..........:..x.......x.:.......:.xx.:.:.::--------------...:....:.x.x..:..-....:...:.x::x.:.x:.x:.:x:.....--.:.:.:.:x....x.:..xxx....:...... 31M4D25M1I4M1D12M4D10M1D161M1D115M9D21M2I13M12I24M4D3M12D14M16I12M6D9M2I13M3I42M14I18M1I31M2I32M 474/590 80.3% 643/94230402 0.0% 95/590 16.1% 2024481 NA +11241 chr4 + 190214555 17317778 17317777 17318173 396 CATTGTAAATGAGGATGAGAAAAAAACAGCAGGATATAGTCCCTCCGGTGACACAAGACCAGTCTCACCTTATCATGGAAATAGACGAACAATTAAACGGCATGAATCTAAAACCCTAAAAGTGGATTTTCTTATTTTTATATGGCTTCTTATGCTTATTTTC--AAAACCTACTGGT------------GGATTCAATGTAGCAGGGTATCTTGATATTACTATATGAAAATGGAAAATTCCTATT----------------TCTGTTAAAAAAAAAGAGATAAACTGT--CAAAGGTGAAGTT---CTTAATTATGCATGTGTTTTGCCCAACAGCTGAATAGAAACC--------------AGAATCAGAAAATAATTT-TTTAACAAGTAGACTGGCAGTATCCAGGTTT--GTTTGTCCAGCTTAACTTCCTCTGGCTAAAGC chr4 - 94230402 15296035 15296034 15296451 78933952 78933951 78934368 417 CATTGTAAATGAGGATG-GAAAAACACAGCAGGATACCATTCCCCCAGTGACATGGGACTAGTCTCACCTTATCAGGGAAATAGACCAACAATTAAACTGCACAAATCTAAAAGACCGAAAGTAGATTTTTTTTTT--------GTTTGTTATTCTGTTTTGCAGAAAATCCAATAGCTTGTCAGTGCAGGGATTCAGTCTGGAAGGGGGGCTT----TTG------------GGGAAATTCCTTTTAATTTAATTTAATGTCTTTATCAGGAAA------TTAAACGGTAATAAGGGGGTAGTTCTCCTTAATTATGTATTTGTTTTGACTAACAGCTAACGAAAGATTTAGGATGTACACAAAGAGTCAGGACAGAACTTGTTTAGCAAATCAGATAGGGGGGTTAGGGTTTAGGCTCGCCTTGCTTTATTTAAACTGGTTAAAGC .................-......x...........:x:.:..:..:......:::...:...............x..........x...........x...::.........xx.::.....:......:..x..--------.:..x....x..xx...x.--....:.:.x.:.:------------.......:.x.:.x....x:x...----..:------------..:........x..----------------.:.:.:.::...------x.....x..--:..:..x.x....---..........:..x.......x.:.......:.xx.:.:.::--------------...:....:.x.x..:..-....:...:.x::x.:.x:.x:.:x:.....--.:.:.:.:x....x.:..xxx....:...... 17M1D118M8D19M2I13M12I24M4D3M12D14M16I12M6D9M2I13M3I42M14I18M1I31M2I32M 269/365 73.7% 417/94230402 0.0% 83/365 22.7% 2021743 NA +3162 chr4 + 190214555 17357869 17357868 17357914 46 TTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTTGCTCTGTTGC chr4 - 94230402 5847650 5847649 5847695 88382708 88382707 88382753 46 TTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..............:.::...........xx.........:x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 11510219 NA +3100 chr4 + 190214555 17358518 17358517 17358566 49 TGGTTGTTTTTGGTTTTTTGAGGATTTTTTTTTTTTTGGAGGCGGGGGG chr4 - 94230402 37468551 37468550 37468599 56761804 56761803 56761852 49 TGTTTTTTTTTTGTTTTTTGTGGGTTTTTTTTTTTTGGGGGGGGGGGGG ..x..x.....x........x..:............x..:..x...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -20110033 -74120369 +8779 chr4 + 190214555 17373156 17373155 17373560 405 TTAACTTACCACACCACTTTTGCCTCCCTCTCTCTGTCTCTCTCTCTCCCT---CTCACACACACACACATAGACACACACACAGAGAGAG-----------------------------------------AGCAAAGTAATACTCTCCTGTCAAGCTAAAATCATCTTATTTTGATATATCAACACATATCACATAATTCGTATCTTTAATCAATACATCTAATTTGGATAATGCACATGGGGTGATTGGGTGTCTATCTGCTAATAACAGGGTCTGAATGCTAATGGCTGAGAAAAGCTAAATGCCC---AAGAATAGACATGGATTAACTATGAGC-ATTTGCCTCTTGGCTTTCCTAGCACTGTTTGATTTCCCCTTCATTTAACCTTGACATTTATAAACCTAATCAAAAGGTTTAAT----AAATAGGAACCCAACTTAAAC--ACAAAGCA chr4 - 94230402 15316384 15316383 15316834 78913569 78913568 78914019 451 TTAACTT--CTCACCTTTCCTTCCACACACACTTCACTTCTTTCTCCCCCCGTACTCACAAATACATGTAAATACACCCACATATACAAAACCAGCACTTAAGAATACAGTCTATAAATTTAAAAATATGTAAGTACGGAAGTACAATCTTATGAACATGAAGCCACTGTGGTTTAAAGTCTGCGCATTCAACACATAATTTGTAACTTTAATCAACACATCTCATTTTGCTAATGCACAC----TGACTGGATGCCTGAGTGCTAATGAGCGTCCCTGAATGCTAATGGCTCTGCGAGGCCGGATGGCCTCTGAGCATC-ACAGGGATTATCTACAACTGATTTGCATCTCAGA-TTCCCAGCACCATTCAGCTTCACCTCTCTTTGACCTTGACATTTTATAACCAGGGAGAACAGTTGGATTATGAAAGAAAAGACAAAACTAAACTAAAAAAGCA .......--.x....x:.::.x..x.x.x.x..:::::...:....:...:---......x.:...:::.x.x....x....:.x.x.:.:-----------------------------------------..:.x:.x.:...xx..:.:.x..xx.:..::..::x.:x...:.x:.x.xx:..:x:.x.........:...x..........:......x....x.x.........:----...:...:..:..:xx.......:.xx.xx:................xx.x:.:..:::...x..---:..x..x-...x......x...::.x:-......x...::.x-....:.....::..::::...x...::x...:............xxx....x::xx:..x:...x:..----...x.::.:x.x..x:.....--.x...... 7M2D42M3I37M41I109M4D65M3I7M1D19M1I14M1D68M4I21M2I8M 260/397 65.5% 451/94230402 0.0% 62/397 15.6% 2056772 NA +3645 chr4 + 190214555 17392743 17392742 17392868 126 AAGAAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAAGGAAGGAAGGAAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACAC-----CGGAAAGGAGAGGAATAAAG ..:x..:..:...::...:.....::.:.:.......xx.x:.:....x..:::xxx...--.....xx....x.:.::..x:.:....:.....:.:..x.:-----x:.:.....:.....x:... 60M2I41M5D20M 78/121 64.5% 123/94230402 0.0% 7/121 5.8% -13140421 -81089981 +3674 chr4 + 190214555 17392749 17392748 17392883 135 GAAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAAGGAAGGAAGGAAAGGAAGGAAGGAAAGGGAACAGAAG chr4 - 94230402 91538039 91538038 91538170 2692233 2692232 2692364 132 GAGAGCAAGAAGGAAACGATG--GAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAG---AGGAAGGAGGCACAGAGCACTGCAG ..:..x..........x:.x.--:.........x.......:...x:x.--.x...x.::...x.x.........x:::..xx:.xx::..::x...x..x.:......---........:.x.x..:.x..x.x.. 21M2D26M2I58M3D25M 89/130 68.5% 132/94230402 0.0% 7/130 5.4% -74145290 -20085112 +3291 chr4 + 190214555 17392760 17392759 17392884 125 GGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGAAGGAAGGAAGGAAAGGAAGGAAGGAAAGGGAACAGAAGG chr4 - 94230402 91538038 91538037 91538162 2692241 2692240 2692365 125 GGAGAGCAAGAAGGAAACGATGG--AGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGGCACAGAG ...:..x.....:::..x..x:.--.........x.......:...x:x.--.x...x.::...x.x.........x:::..xx.xxx..:...x..xx..x...:.:.::.:....:::..x.::. 23M2D25M2I75M 79/123 64.2% 125/94230402 0.0% 4/123 3.3% -74145278 -20085124 +3406 chr4 + 190214555 17392881 17392880 17392939 59 AAGGAAGGAGAGGGTGGAAGGAGAGGGTGGAAGGAAAAAAGAAAGAGAAAGAAAAAAAC chr4 - 94230402 77186079 77186078 77186137 17044266 17044265 17044324 59 AAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAAC ...:...:x.:...x..::..:.....x.....:.:........:.....x.x...... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -59793198 -34437204 +3150 chr4 + 190214555 17393327 17393326 17393371 45 TTTACCTCAAAAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAA chr4 - 94230402 71718663 71718662 71718707 22511696 22511695 22511740 45 TTTATTTTAGGAAAAAAAAAAGGGGGGGGGGGGGGGGGAGAGAAA ....::.:.::.....................:....:..:.:.. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% -54325336 -39905066 +3265 chr4 + 190214555 17393334 17393333 17393379 46 CAAAAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGG chr4 - 94230402 7660435 7660434 7660476 86569927 86569926 86569968 42 CAAAAAAAAAAAAAGGGGGGGGGGGGGGGGA----GAAGGGGGAGG .........................:.....----.......:... 31M4D11M 40/42 95.2% 42/94230402 0.0% 4/42 9.5% 9732899 NA +3119 chr4 + 190214555 17393335 17393334 17393373 39 AAAAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAAGG chr4 - 94230402 7660438 7660437 7660476 86569927 86569926 86569965 39 AAAAAAAAAAAGGGGGGGGGGGGGGGGAGAAGGGGGAGG ...........::...........:..:.......:... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 9732897 NA +3234 chr4 + 190214555 17393335 17393334 17393369 35 AAAAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGG chr4 - 94230402 58845120 58845119 58845154 35385249 35385248 35385283 35 AAAAAAAAAAAAAGGGGGGGGGGGAGGGGAGGGGG ..............................:.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -41451785 -52778617 +3117 chr4 + 190214555 17393337 17393336 17393392 56 AAAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGGGAACTAATATAAA chr4 - 94230402 59863354 59863353 59863407 34366996 34366995 34367049 54 AAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAA--GAACAAAAATGAA ..:................:..:....:....:.:.:.:..--....x..x..:.. 41M2D13M 43/54 79.6% 54/94230402 0.0% 2/54 3.7% -42470017 -51760385 +3132 chr4 + 190214555 17393338 17393337 17393396 59 AAAAAAAAAAGGGGGGGGGGGAGGGGAAGGGGAAGGGGAAGGGAACTAATATAAAGCTT chr4 - 94230402 28395864 28395863 28395922 65834481 65834480 65834539 59 AAAAAAAGAAGGGGGGGGGGGAGGGGGGGGGAACAAACAAAAAAACAACCATGAGGCTT .......:..................::...:.x:::x..:::...x.x:..:.:.... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -11002526 -83227876 +8042 chr4 + 190214555 17396903 17396902 17397416 514 CTCCAATAAATCCATCTTCTCAGGGCAA--TAACTCCCCAGTATGATGCATTCATCAATCAAAGC-GTCTATCGTGGGTTCACGCCACAGACCTGTCTACACCACAGAGGTGGCATTACAGACTTGGGCTCCCATCTTGCTTTAGCCCAGGTGCTTACTGGGACCTGATATTGTCTGTGATTTCTCACAAGCCT--GAGACATGGAAAACTGACAC----AATACAGTATCGTAAAAATGAATCTTT--GTCACCTGATCATTTTCATGTTAACAACTGGAAACAAGACTG-----GGGCTCTTTTTAAACATGAGATTTAATAGGGGATGGGAGACTGAAGACGGGGTGAGCTTTTCTATGAGGCATGGTGGTAATAAATGTCACCAAGTGGGAAATATTCTAGCCCTATTTCTAGGAACCAGAGGCAGCAGCTCAGGGCAGAAAAATGACAATAATTATATTACTCAGAAGCCGACAGCATGTATAAATCTGATGTATTAAGCC-CTGCTTGTGGATTTGCTTTCCAAA chr4 - 94230402 15322031 15322030 15322522 78907881 78907880 78908372 492 CTCCAATAAGT---GATTTTCAGGACAGATTGACCATGCAGCACCTTGCCTTCATGAATTGAAGCCATCTATCACACAGTCCCTCTGCAG--CTTTCTGGAAAGCTGAGGT---ATTGCATCTTTTGTCTTCCTGTTTATTTAAGTCTA--TTATTCTGTGGATCTGAACTCCACACTGATCTCCCAGTTTCCTATGTGATACAGAGG---GACACTTCAGCTACAGTATCGTCAAA-TGATTTTTTTTGTCACATGGTA----TTGTACCAAAGTCTC-AGGCAGGAATGTGTGAGGGCTCTTTA-AAATGCAAGATTCACCAAGGGG---------GAAAAAGAGGCTAATTGTGCAA--AGGCA-------AAAAACCGTCACGTGGCCAAACACATCCTCTCATTATTTCCAGAAGCTAAAGA-AGTGGTTGGAGGCAGAAAACTGACAATAATTATATTGCCTGGAAACTGACAGCACACGTAAATCTAGTGTGTTAAGCCTTTATTCATTGATTTACTTTCCAAA .........:.---xx..:.....:..:--.:..:x:x...:.:xx...x.....x...::....-:......:::x:x..x.x.::...--..x...:x.xx:.x.....---...:..xx:..x.x..:..xx:..::..x..:.:.--.xx..x:xx...:....xx.:xx.xx....:..:..xxxx...--.x..:.::..::---.....----:x...........x...-...x.:...--.....x..:.x----.::.:::..x:x..x-.::..:..x..-----.........x-...::::.....:.x:.:...:---------...:.x.:..:x.::.x.x.x.--.....-------..x..x:.....xx:.:x::.x.:..:..xx.x:......:..:.:.:.:..:-..::.:.x::.........x................:.:::...:.:.......::::.......::...:.......-:.::.::.x.....:......... 11M3D14M2I35M1I24M2D19M3D35M2D43M2I12M3D5M4I17M1D9M2I11M4D15M1D11M5I10M1D22M9D22M2D5M7D53M1D78M1I24M 306/475 64.4% 492/94230402 0.0% 56/475 11.8% 2074872 NA +3199 chr4 + 190214555 17476455 17476454 17476504 50 AGAAAGAAGGAAGGAAGGAAAGAAAGAAAAGAAGGAAGGAGAAGAGAAAA chr4 - 94230402 82423486 82423485 82423535 11806868 11806867 11806917 50 AGAAATAAAGAAGGAGGGAAAAAAAAAAAAGAAGGAATGACAAAAGATAA .....x..:......:.....:...:...........x..x..:...x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -64947031 -29283371 +6688 chr4 + 190214555 17487133 17487132 17487239 107 AAAAATATGCTGGGGTGAGTTCCGTCCTTCCTTCTGTGGTTACCACCTGGATTAGGCTTCCTGAGCTCGGTCGGTTTTTCCCTGTGATCCAGTCATGGAAAGTTCTG chr4 - 94230402 15341244 15341243 15341350 78889053 78889052 78889159 107 AAAGATGTGCAGGAACTAGTTCAGTCTTCCCTCCTGCAGTTATCACCTGGATTAGACTCCCTGAGTTTGGTCGATTCTTTCCTGTTATCCAGTCATAAAAGGTTCTG ...:..:...x..:::x.....x...:.:...:...::....:............:..:......:.:.....:..:..:.....x..........::..:...... 107M 82/107 76.6% 107/94230402 0.0% 0/107 0.0% 2145889 NA +3409 chr4 + 190214555 17508594 17508593 17508677 84 AAAGAGGTTTTTTCAGTAATCTGGAGAATTATTTAAGTATA-----AAAAAAAAAAAAAACAAA-GCTTACCATAAACTATAAAATACAA chr4 - 94230402 54338727 54338726 54338816 39891587 39891586 39891676 90 AAAGAGTTTTCTTCAGCTATCTGAAGAATTGATTAAACAAAACCAGAAAAAAAAAAAAAACAGATTCACACAGCAAACAAAAAGATGCAA ......x...:.....:x.....:......:x....::.x.-----................:.-x.x:..x::....x.x..:..:... 41M5I18M1I25M 63/84 75.0% 90/94230402 0.0% 6/84 7.1% -36830133 -57400269 +3432 chr4 + 190214555 17533924 17533923 17533986 63 AAATGAGACCCCCTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAA-AGAAGAGAAAAGG chr4 - 94230402 37322376 37322375 37322439 56907964 56907963 56908027 64 AAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGG ...x:.:.x...:.x:......:................:...:....:.-:..:...:..... 50M1I13M 49/63 77.8% 64/94230402 0.0% 1/63 1.6% -19788452 -74441950 +3156 chr4 + 190214555 17537181 17537180 17537225 45 AGTGAGACTCTATCAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 - 94230402 87676333 87676332 87676377 6554026 6554025 6554070 45 AGTGTATTCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ....x:x::...:................:............... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -70139152 -24091250 +3176 chr4 + 190214555 17546698 17546697 17546761 64 CTCCCGGGTTCAAGAGATTCCCATGCCTCAGCCTCCCCAGCAGCTGGGATTACAGGCTCGCTAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.:.........x.x...x..x.x........::.x..:......:.:....x.:x.:.:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -650441 -93579961 +3042 chr4 + 190214555 17551396 17551395 17551459 64 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAAAGAAAGAAAAGAAAAGAAAACAA chr4 - 94230402 2012068 2012067 2012131 92218272 92218271 92218335 64 TTCTTCTCAAAACCAATGAAAATTAAAATAAAAAGTGAAAAAAAAAAAAAAGAAAATGAATCAA .:.x........xx..x:....xx....x......x..:...:...:.........x:..x... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 15539328 NA +3259 chr4 + 190214555 17551399 17551398 17551457 59 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAAAGAAAGAAAAGAAAAGAAAAC chr4 - 94230402 88558241 88558240 88558299 5672104 5672103 5672162 59 ATCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAAC ..........:.x.................:.:x:.:::.:::.:x.......x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -71006842 -23223560 +3243 chr4 + 190214555 17553126 17553125 17553184 59 AAAAATAAAAAATAAAAGAAAAAAGAAAAGAAAAAAAAAACAAAAAAAACTAAATGTAC chr4 - 94230402 71125487 71125486 71125545 23104858 23104857 23104916 59 AGAAATAAAAAATAAAAAAAGAGAGAGAGGAAAAAAAGAACAAGCCTAGCTGTATGTGC .:...............:..:.:...:.:........:.....:xxx.:..:x....:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -53572361 -40658041 +3295 chr4 + 190214555 17553957 17553956 17554022 66 AACCTCCTGTGAATCTACATATACATACATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735341 92735340 92735400 1495003 1495002 1495062 60 AACCTCTTGCATATCTATATGTATGTACACATATATATAT------TTTTTCTATTTTTTTTTCTG ......:..::x.....:..:..::....:..........------.....:.x.........:.. 40M6D20M 48/60 80.0% 60/94230402 0.0% 6/60 10.0% -75181384 -19049018 +4004 chr4 + 190214555 17569482 17569481 17569615 134 AAGGCAGGAGAACCACTTGAACCCAGGAGGTGAAGTTTGCAGTG-----AGCCGAG--ATCGCACCACTGCACT-CCAGCCTGGGTGACAGAGTGAGACTCCACCACACACACACACACACACACAAAAAAAAAAAAAAAGA chr4 - 94230402 76394317 76394316 76394441 17835962 17835961 17836086 125 AAGAAAAGAGAATCAT---------GGAGTGGGAGCTGGCAGTGGCATTAGCGGAGCCATTGAGCTTTTGCCCTTCCAGCCTGGGAGACA--------CTCACCAGCTTACACACACACACACACAAAAAAAAAAAAAAAAA ...:x.:.....:..:---------....xx.:..:.x......-----...x...--..:.x:.:x:...x..-..........x....--------...xx.x:.x:...............................:. 16M9D19M5I7M2I16M1I15M8D44M 91/117 77.8% 125/94230402 0.0% 25/117 21.4% -58824835 -35405567 +3137 chr4 + 190214555 17569573 17569572 17569647 75 TCCACCACACACACACACACACACACAAAAAAAAAAAAAAAGAAGG---AGAGATATAAATA---TGAA--CACATATTAAAG chr4 - 94230402 67973310 67973309 67973392 26257011 26257010 26257093 83 TCAAATACACAAATACACACACACACAAAAAAAAAAAAAAGACAGGACAAGAGCCACAAAAACACTGAAGGCAGATAGTAAAG ..x.x:.....x.:..........................::x...---....x:.:...x.---....--..x...x..... 46M3I13M3I4M2I12M 61/75 81.3% 83/94230402 0.0% 8/75 10.7% -50403737 -43826665 +3082 chr4 + 190214555 17569574 17569573 17569614 41 CCACCACACACACACACACACACACAAAAAAAAAAAAAAAG chr4 - 94230402 76394402 76394401 76394442 17835961 17835960 17836001 41 CCAGCTTACACACACACACACACAAAAAAAAAAAAAAAAAG ...x.x:.................x................ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -58824828 -35405574 +3183 chr4 + 190214555 17569577 17569576 17569632 56 CCACACACACACACACACACACAAAAAAAAAAAAAAAGAAGGAGAGATATAAATAT chr4 - 94230402 67652083 67652082 67652138 26578265 26578264 26578320 56 CCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAAT ......::...x...:...:..x............:...::......x.x.:.x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -50082506 -44147896 +3062 chr4 + 190214555 17573694 17573693 17573766 73 AAATTTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGATTATTATTATTTTTT chr4 - 94230402 57691395 57691394 57691467 36538936 36538935 36539008 73 AAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTT ..:.x:...::..:x.......:..:x.........::..x....:x...x.....xx.x...xx:....... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -40117701 -54112701 +3369 chr4 + 190214555 17573697 17573696 17573782 86 TTTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGATTATTATTATTTTTTGAGACAGGGTCTCATT chr4 - 94230402 19559278 19559277 19559363 74671040 74671039 74671125 86 TTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtggtgggttcacact ...x..xx.:.x.x.x.x...............:..............:.xx.:...x..:.xxx..:...x.:::..x..x..:. 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% -1985581 -92244821 +3446 chr4 + 190214555 17573715 17573714 17573768 54 TGTGTGTGTGTGTGTGTATATATATATATATATATGATTATTATTATTTTTTGA chr4 - 94230402 40224679 40224678 40224732 54005671 54005670 54005724 54 TGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGA .............:..........x...:....:..x.:.x...x....x.... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% -22650964 -71579438 +7999 chr4 + 190214555 17582246 17582245 17582414 169 TGAAAGAAATAAAGTGGTTGATTTGGTGTATCTGTGGGACAGGACTTCCCCAGCGTGGTGCTAGTTGGCCTCGGCAAAAAGGCAGCTGGAATCGACGAACAGGAAAACTGGCATGAAGGCAAAGAAAACATCAGAGCTGCTGTTGCAGGTTATTTCACTTTTTAAGTTT chr4 - 94230402 15352171 15352170 15352332 78878071 78878070 78878232 162 TGAGGAAAGTGAACCCATTTGTGTGTTGGCTTTGTG---CAGGACTTTCCAAGCGTGGTTGTAGTTGGCTTGGGTAAGAAGAATGCTGGAGTCAACGACCAAGAAAACTGGAATGAAGGCAAAGAAAATATCCGTGCAGCTGTTGCAGGTTA----ACCTTTTAAATTT ...:::..:.:..x:x:..x:.x..x..xx.:....---........:..x........xx........:.x..:..:...:xx......:..:....x..:.........x................:...x.x..x..............----..:......:... 36M3D113M4D13M 124/162 76.5% 162/94230402 0.0% 7/162 4.3% 2230075 NA +7999 chr4 + 190214555 17582246 17582245 17582414 169 TGAAAGAAATAAAGTGGTTGATTTGGTGTATCTGTGGGACAGGACTTCCCCAGCGTGGTGCTAGTTGGCCTCGGCAAAAAGGCAGCTGGAATCGACGAACAGGAAAACTGGCATGAAGGCAAAGAAAACATCAGAGCTGCTGTTGCAGGTTATTTCACTTTTTAAGTTT chr4 - 94230402 15343706 15343705 15343867 78886536 78886535 78886697 162 TGAGGAAAGTGAACCCATTTGTGTGTTGGCTTTGTG---CAGGACTTTCCAAGCGTGGTTGTAGTTGGCTTGGGTAAGAAGAATGCTGGAGTCAACGACCAAGAAAACTGGAATGAAGGCAAAGAAAATATCCGTGCAGCTGTTGCAGGTTA----ACCTTTTAAATTT ...:::..:.:..x:x:..x:.x..x..xx.:....---........:..x........xx........:.x..:..:...:xx......:..:....x..:.........x................:...x.x..x..............----..:......:... 36M3D113M4D13M 124/162 76.5% 162/94230402 0.0% 7/162 4.3% 2238540 NA +9261 chr4 + 190214555 17583454 17583453 17583666 213 CAGTTTTCTGATTCCT--CTGTCTTTTCAAGCGGGGTGCAGGCAGATTCAAGACCTGGAGCTCTCGTCTGTGGAGGTGGATCCCTGTGGAGACGCTCAGGCTGCTGCGGAGGGAGCGGTGCTTGGTCTCTATGAATACGATGACCTAAAGCAAAAAAAGAAGATGGCTGTGTCGGCAAAGCTCTATGGAAGGTGATGGAAGCAAATTAGGAGGAG chr4 - 94230402 15352977 15352976 15353186 78877217 78877216 78877426 210 CAGCCTACTCATTCTGTACTGTATTTTTCAGTTGGCTGTAGACAGATCCAAGACCTGGAAATCCCCTGTGTTGAAGTGGACCCCTGTGGAGACGCTCAAGCAGCAGCAGAAGGTGCTGTCCTTGGACTGCATGAATACAATGAGCTGAAGCAAAAAAAGAAACCTGTAGTTACTCCTCAGCTTCATGGAAGGTGATG---ACAAA--AGGAGAAG ...::.x..x....:x--....x....:x..:x..x..:..:.....:...........:x..:.x.x...x..:.....:.................:..x..x..:..:..x..x..x.....x..x:........:....x..:..............:x:x.:x..xx.xx.xx....::.............---:....--.....:.. 16M2I179M3D5M2D8M 155/208 74.5% 210/94230402 0.0% 7/208 3.4% 2230477 NA +9361 chr4 + 190214555 17583470 17583469 17583666 197 CTGTCTTTTCAAGCGGGGTGCAGGCAGATTCAAGACCTGGAGCTCTCGTCTGTGGAGGTGGATCCCTGTGGAGACGCTCAGGCTGCTGCGGAGGGAGCGGTGCTTGGTCTCTATGAATACGATGACCTAAAGCAAAAAAAGAAGATGGCTGTGTCGGCAAAGCTCTATGGAAGGTGATGGAAGCAAATTAGGAGGAG chr4 - 94230402 15344529 15344528 15344720 78885683 78885682 78885874 192 CTGTATTTTTCAGTTGGCTGTAGACAGATCCAAGACCTGGAAATCCCCTGTGTTGAAGTGGACCCCTGTGGAGACGCTCAAGCAGCAGCAGAAGGTGCTGTCCTTGGACTGCATGAATACAATGAGCTGAAGCAAAAAAAGAAACCTGTAGTTACTCCTCAGCTTCATGGAAGGTGATG---GCAAA--AGGAGAAG ....x....:x..:x..x..:..:.....:...........:x..:.x.x...x..:.....:.................:..x..x..:..:..x..x..x.....x..x:........:....x..:..............:x:x.:x..xx.xx.xx....::.............---.....--.....:.. 179M3D5M2D8M 146/192 76.0% 192/94230402 0.0% 5/192 2.6% 2238941 NA +8775 chr4 + 190214555 17588817 17588816 17588993 177 AGACCCAAGTCTTGGATTGAGGAACAGGCAATGGGATCATTCCTCAGTGTGGCCAAAGGATCTGACGAGCCCCCAGTCTTCTTGGAAATTCACTACAAAGGCAGCCCCAATGCAAACGAACCACCCCTGGTGTTTGTTGGGAAAGGAATTACCTTTGACAGGTATTTTTTATGGTGT chr4 - 94230402 15355331 15355330 15355507 78874896 78874895 78875072 177 AGACCAGAGTCTTGGATAGCAGCACAGCAGATGGGAGCATTCCTGAGTGTAGCCAAGGGTTCGGCTGAACCTCCTATCTTTCTGGAGATCCACTATTTAGGAGGTGCTAATGCAAACGACTCTCCCTTGGTATTTGTAGGAAAAGGAGTTACGTTTGACAGGTATGTATGGTGATAT .....x:..........x.x:.x....xx:......x.......x.....:.....:..x..x.x:..:..:..x:....::....:..:.....:xx...x:.:x.:...........x:.x...:....:.....x..:......:....x............x.x.x:..:.:. 177M 129/177 72.9% 177/94230402 0.0% 0/177 0.0% 2233486 NA +8775 chr4 + 190214555 17588817 17588816 17588993 177 AGACCCAAGTCTTGGATTGAGGAACAGGCAATGGGATCATTCCTCAGTGTGGCCAAAGGATCTGACGAGCCCCCAGTCTTCTTGGAAATTCACTACAAAGGCAGCCCCAATGCAAACGAACCACCCCTGGTGTTTGTTGGGAAAGGAATTACCTTTGACAGGTATTTTTTATGGTGT chr4 - 94230402 15346893 15346892 15347069 78883334 78883333 78883510 177 AGACCAGAGTCTTGGATAGCAGCACAGCAGATGGGAGCATTCCTGAGTGTAGCCAAGGGTTCGGCTGAACCTCCTATCTTTCTGGAGATCCACTATTTAGGAGGTGCTAATGCAAACGACTCTCCCTTGGTATTTGTAGGAAAAGGAGTTACGTTTGACAGGTATGTATGGTGATAT .....x:..........x.x:.x....xx:......x.......x.....:.....:..x..x.x:..:..:..x:....::....:..:.....:xx...x:.:x.:...........x:.x...:....:.....x..:......:....x............x.x.x:..:.:. 177M 129/177 72.9% 177/94230402 0.0% 0/177 0.0% 2241924 NA +6221 chr4 + 190214555 17597044 17597043 17597145 102 AGGTCTGGCCCCTCTTTGTGAAAATATGCCCAGCGGCAAGGCCAACAAGCCGGGGGATGTTGTTAGAGCCAAAAACGGGAAGACCATCCAGGTTTGTAAATG chr4 - 94230402 15357883 15357882 15357984 78872419 78872418 78872520 102 AGGTTTGGCACCCCTCTGTGAAAACATGCCCAGTGGTAAGGCAAACAAGCCTGGGGATGTAGTTACAGCCAAGAATGGAAAAACAATACAGGTATGCCTATG ....:....x..:..:........:........:..:.....x........x........x....x......:..:..:..:..x..x.....x..:xx... 102M 81/102 79.4% 102/94230402 0.0% 0/102 0.0% 2239161 NA +6221 chr4 + 190214555 17597044 17597043 17597145 102 AGGTCTGGCCCCTCTTTGTGAAAATATGCCCAGCGGCAAGGCCAACAAGCCGGGGGATGTTGTTAGAGCCAAAAACGGGAAGACCATCCAGGTTTGTAAATG chr4 - 94230402 15349444 15349443 15349545 78880858 78880857 78880959 102 AGGTTTGGCACCCCTCTGTGAAAACATGCCCAGTGGTAAGGCAAACAAGCCTGGGGATGTAGTTACAGCCAAGAATGGAAAAACAATACAGGTATGCCTATG ....:....x..:..:........:........:..:.....x........x........x....x......:..:..:..:..x..x.....x..:xx... 102M 81/102 79.4% 102/94230402 0.0% 0/102 0.0% 2247600 NA +6637 chr4 + 190214555 17598419 17598418 17598594 176 TTGCGCTGTCACCCTTTCTGTTTTTGA----CCCTCTGCAGGTTGATAACACTGATGCTGAGGGGAGGCTCATACTGGCTGATGCGCTCTGTTACGCACACACGTTTAACCCGAAGGTCATCCTCAATGCCGCCACCTTAACAGGTCAGACCGCGCACTTGCCTTGATTTTGTTTGAAGG chr4 - 94230402 15358383 15358382 15358560 78871843 78871842 78872020 178 TTCCGCAGTTAATCTCTTT-TTATTGATTTTCCACCTGAAGGTTGATAACACAGATGCAGAAGGAAGGCTGCTATTAGCTGATGCTCTCTGTTATGCCCACAATTTTAACACAAGGGCTATTGTGAATGCTGCAACGTTAACAGGTAAG-CAGTCTCCTTTCCCTGCTTCATTTTGGAAG ..x...x..:.x:..:.:.-..x....----..x:...x.............x.....x..:..:.....xx..:.:........x........:..x....xx......x.:.:..::..:x.x.....:..x..x.........x..-.x.:x:x...x..:..x..:xx....:.:. 19M1D7M4I118M1D30M 125/174 71.8% 178/94230402 0.0% 6/174 3.4% 2240036 NA +6747 chr4 + 190214555 17598419 17598418 17598594 176 TTGCGCTGTCA--CCCTTTCTGTT--TTTGACCCTCTGCAGGTTGATAACACTGATGCTGAGGGGAGGCTCATACTGGCTGATGCGCTCTGTTACGCACACACGTTTAACCCGAAGGTCATCCTCAATGCCGCCACCTTAACAGGTCAGACCGCGCACTTGCCTTGATTTTGTTTGAAGG chr4 - 94230402 15349946 15349945 15350124 78880279 78880278 78880457 179 TTCCGCAGTTAATCTCTTTTTATTGATTTTTCCACCTGAAGGTTGATAACACAGATGCAGAAGGAAGGCTGCTATTAGCTGATGCTCTCTGTTATGCCCACAATTTTAACGCAAGGGCTATTGTGAATGCTGCAACGTTAACAGGTAAG-CAGTCTCCTTTCCCTGCTTCATTTTGGAAG ..x...x..:.--.:....:.:..--...xx..x:...x.............x.....x..:..:.....xx..:.:........x........:..x....xx......x.:.:..::..:x.x.....:..x..x.........x..-.x.:x:x...x..:..x..:xx....:.:. 11M2I11M2I123M1D30M 126/175 72.0% 179/94230402 0.0% 5/175 2.9% 2248473 NA +5621 chr4 + 190214555 17604580 17604579 17604698 119 TCTTACAGGTGCCATGGATGTAGCTTTGGGATCAGGTGCCACTGGGGTCTTTACCAATTCATCCTGGCTCTGGAACAAACTCTTCGAGGTAGG--AATAATATTTGTATATCTAAATTGTA chr4 - 94230402 15363388 15363387 15363505 78866898 78866897 78867015 118 TCTTGTAGGTGCCATGGATGTTGCATTGGGGTCTGCTGCAACTGGGGTGTTCACAAATTCATCTTGGCTTTGGAATCACCTTTATGAGGTAGGCCATCAACATTAATAT---CAAATGGTA ....::...............x..x.....:..x.x...x........x..:..x........:.....:.....:x.x..:.x:........--.x:..:...x:...---:....x... 93M2I14M3D9M 90/116 77.6% 118/94230402 0.0% 5/116 4.3% 2241192 NA +5621 chr4 + 190214555 17604580 17604579 17604698 119 TCTTACAGGTGCCATGGATGTAGCTTTGGGATCAGGTGCCACTGGGGTCTTTACCAATTCATCCTGGCTCTGGAACAAACTCTTCGAGGTAGG--AATAATATTTGTATATCTAAATTGTA chr4 - 94230402 15360227 15360226 15360344 78870059 78870058 78870176 118 TCTTGTAGGTGCCATGGATGTTGCATTGGGGTCTGCTGCAACTGGGGTGTTCACAAATTCATCTTGGCTTTGGAATCACCTTTATGAGGTAGGCCATCAACATTAATAT---CAAATGGTA ....::...............x..x.....:..x.x...x........x..:..x........:.....:.....:x.x..:.x:........--.x:..:...x:...---:....x... 93M2I14M3D9M 90/116 77.6% 118/94230402 0.0% 5/116 4.3% 2244353 NA +6937 chr4 + 190214555 17606816 17606815 17606938 123 ACCTGTTCTCT---AGGCCAGCATTGAAACAGGGGACCGTGTCTGGAGGATGCCTCTCTTCGAACATTATACAAGACAGGTTGTAGATTGCCAGCTTGCTGATGTTAACAACATTGGAAAATACAG chr4 - 94230402 15364183 15364182 15364308 78866095 78866094 78866220 126 ACCTTTTCTTTTTCAGGCCAGCATCGTGACAGGGGACCGGGTATGGAGAATGCCTCTTTTTGAACATTACACAAAACAAGTAACAGATTGCCCTCTCGCAGACCTGAGTAACATTGGGAAGTACAG ....x....:.---..........:.x:...........x..x.....:........:..:........:....:...:..x::........xx..:..x..:x.x.::........:..:..... 11M3I112M 96/123 78.0% 126/94230402 0.0% 3/123 2.4% 2242633 NA +7028 chr4 + 190214555 17606821 17606820 17606938 118 TTCTCTAGGCCAGCATTGAAACAGGGGACCGTGTCTGGAGGATGCCTCTCTTCGAACATTATACAAGACAGGTTGTAGATTGCCAGCTTGCTGATGTTAACAACATTGGAAAATACAG chr4 - 94230402 15361031 15361030 15361148 78869255 78869254 78869372 118 TTTTTTAGGCCAGCATCGTGACAGGGGACCGGGTATGGAGAATGCCTCTTTTTGAACATTACACAAAACAAGTAACAGATTGCCCTCTCGCAGACCTGAGTAACATTGGGAAGTACAG ..:.:...........:.x:...........x..x.....:........:..:........:....:...:..x::........xx..:..x..:x.x.::........:..:..... 118M 91/118 77.1% 118/94230402 0.0% 0/118 0.0% 2245790 NA +10647 chr4 + 190214555 17607383 17607382 17607665 283 TTTGTCTTTCTCTT-----CAGATCTGCAGGAGCATGTACAGCTGCAGCATTCCTGAAAGAATTCGTAACTCATCCTAAGTGGGCACATTTAGACATAGCAGGCGTGATGACCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACTGGGAGGCCCACAAGGACTCTCATTGAGTTCTTACTTCGTTTCAGTCAAGAC------------------AATGCTTAGTTCAGATACTCAAAAATGTCTTCACTCTGTCTTAAATTGGACAGTTGAACTTAAAAGGTTTTTGAATAAATGGATG chr4 - 94230402 15364393 15364392 15364696 78865707 78865706 78866010 304 TTCGTCTTTCTCCTTCCTGCAGAGCTGGAGGAGCGTGCACAGCTGCTGCGTTCCTGAAGGAGTTTGTGACAGCCCCTCACTGGGCTCACCTGGACATTGCTGGTGTGATGGCCAACAAGGATGAGGTGCCATACCTGCGGAAGGGCATGGCCGGGCGCCCCACCAGGACACTGGTGGAGTTTGCGGCTCGGTTAAGCCAAGACAGTCAAAGTCCCAAATAAAATGCTTAA-ACGTATATTCTAAAAT-CATCCGCTGTGCCTTAAGGAAAAAAAATGCAGTCTGAAAAGTTATGGATAAATGAGTG ..:.........:.-----....x...x......:..:........x..:........:..:..:..:..xxx:...x.x.....x..::.:.....x..x..:......:.......:.....:..x..x..:..:.....:......:.:...x.x.....x.....x..x:.x.....:x::x:...x..x..:......------------------........:-x.:x...:..x.....-:x.:.:..x..:.....:xx::.x.:x..x.x.:x:..::x..x..:.......::.. 14M5I184M18I9M1D16M1D58M 198/281 70.5% 304/94230402 0.0% 25/281 8.9% 2242990 NA +10940 chr4 + 190214555 17607383 17607382 17607665 283 TTTGTCTTTCTCTT-----CAGATCTGCAGGAGCATGTACAGCTGCAGCATTCCTGAAAGAATTCGTAACTCATCCTAAGTGGGCACATTTAGACATAGCAGGCGTGATGACCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACTGGGAGGCCCACAAGGACTCTCATTGAGTTCTTACTTCGTTTCAGTCAAGAC------------------AATGCTTAGTTCAGATACTCAAAAATGTCTTCACTCTGTCTTAAATTGGACAGTTGAACTTAAAAGGTTTTTGAATAAATGGATG chr4 - 94230402 15361233 15361232 15361536 78868867 78868866 78869170 304 TTTGTCTTTCTCCTTCCTGCAGAGCTGGAGGAGCGTGCACAGCTGCTGCGTTCCTGAAGGAGTTTGTGACGGCCCCTCACTGGGCTCACCTGGACATTGCTGGCGTGATGGCCAACAAGGATGAGGTGCCATACCTGCGGAAGGGCATGGCCGGGCGTCCCACCAGGACACTGGTGGAGTTTGCGGCTCGGTTAAGCCAAGACAGTCAAAGTCCCAAATAAAATGCTTAA-ACGTATATTCTAAAAT-CATCCGCTGTGCCTTAAGGAAAAAAAATGCACTCTGAAAAGGTATGGATAAATGAGTG ............:.-----....x...x......:..:........x..:........:..:..:..:..xxx:...x.x.....x..::.:.....x..x.........:.......:.....:..x..x..:..:.....:......:.:...x.x.....x.....x..x:.x.....:x::x:...x..x..:......------------------........:-x.:x...:..x.....-:x.:.:..x..:.....:xx::.x.:x..x...:x:..::xx.x..:.......::.. 14M5I184M18I9M1D16M1D58M 200/281 71.2% 304/94230402 0.0% 25/281 8.9% 2246150 NA +3727 chr4 + 190214555 17610411 17610410 17610484 74 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAGGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::........:.x...x..x.x........::..:......:.:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -586715 -93643687 +3072 chr4 + 190214555 17617979 17617978 17618027 49 AAGGCCTGTGTATCTTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTT chr4 - 94230402 48657034 48657033 48657082 45573321 45573320 45573369 49 AAGGCCTCTGTACCTTTGTATTTGCTTTTTTTTTTTTTTTTTTTCTTCT .......x....:....x.x...x.....:....:.........:..:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -31039055 -63191347 +4286 chr4 + 190214555 17619896 17619895 17619979 84 CACAGGCTTGCTTTGCATCTCTGGTGAGTCAGGACTATGTCAATGGCACCG-ATCAGGA-AGAAATTCGAACCGGTAAGCATTCCC chr4 - 94230402 15365552 15365551 15365637 78864766 78864765 78864851 86 CGCAGGCCTGCTTCGCCTCGCTGGTCAGCCAGGACTACGTGAACGGCACCGAACCAGGAGGGAGATCCGCACCGGTGAGCGCTGCC .:.....:.....:..x..x.....x..:........:..x..:.......-.:.....-:..:..:..x......:...::.x.. 51M1I7M1I26M 65/84 77.4% 86/94230402 0.0% 2/84 2.4% 2254344 NA +8873 chr4 + 190214555 17621585 17621584 17621718 134 AGGTGTTGATCAGTGTATCCAGAAGTTTCTGGATATTGCAAGACAGACAGAATGTTTTTTCTTACAAAAAAGATTGCAGTTATCTGTCCAGAAACCAGAGCAAGTTATCAAAGAGGTATG--AACTCAGTTTTCTC chr4 - 94230402 15365961 15365960 15366096 78864307 78864306 78864442 136 AGGTGTCGATCAGTGCATCCAGAAATTCCTGGATGTTGCCAGGCAAACAGAATGCTTTTTTCTACAAAAAAGACTGCAGCTGTCGGTCCAGAAACCAGAACAAGTAATTAAAGAGGTATGCTAAATTGGTTTACCC ......:........:........:..:......:....x..:..:........:.....::...........:.....:.:..x..............:.....x..:...........--..x.::....x.:. 120M2I14M 111/134 82.8% 136/94230402 0.0% 2/134 1.5% 2255624 NA +11627 chr4 + 190214555 17623590 17623589 17623798 209 TTCATCTGCAGGATGTGTCAGAACTAAGGAATGAATTACAGCGGAAAGATGCACTAGTCCAGAAGCACTTGACAAAGCTGAGGCATTGGCAGCAGGTGCTGGAGGACATCAACGTGCAGCACAAAAAGCCCGCCGACATCCCTCAGGGCTCCTTGGCCTACCTGGAGCAGGCATCTGCCAACATCCCTGCACCTCTGAAGCCAACGTGA chr4 - 94230402 15366645 15366644 15366853 78863550 78863549 78863758 209 TTCACCCTCAGGATGTTTCAGAGTTAAGAAATGAATTGCAAAGAAAAGAAGCATTAATTCAGAAGCATTTGAGTAAACTGCGACACTGGCAACAAGTCCTGGAAGATATCAGTGTACAACACAAAAAACCTGCAGAAATGCCCCAAGGTCCATTAGCGTACCTGGAACAGGCATCTGCTAATATTCCTGCTCCAATGAAGCAATCATGA ....:.:x........x.....::....:........:..:x.:.....x...:..:.:........:....xx..:...x.:..:.....:..:..x.....:..:....::..:..:........:..:..x..x..x..:..:..::.x..:..x........:...........:..:..:.....x..xx......x.x.:... 209M 156/209 74.6% 209/94230402 0.0% 0/209 0.0% 2256945 NA +3130 chr4 + 190214555 17628287 17628286 17628340 54 TGTGTATGTGTATATGCGTATATATGTGTATGTATGTGTGTATATATATATGTG chr4 - 94230402 70982629 70982628 70982682 23247721 23247720 23247774 54 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG .....:.......:..:...:......x:..:x........::...:.:.::.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -53354342 -40876060 +4206 chr4 + 190214555 17632483 17632482 17632644 162 AAAATAAATG-TTTTTCAAGTATCCTCTGTGATGTATCCCAAAGGTTAGCTTAGAAAGAAAAGTACTTGGTGAACCATTCCTGGTGCGGAGAGCCCTGTTTCTGCTGGACTTCTTTGGCTTGGGCCGTTTCACCATCTGGGGTCC--TAAAAGCAAAAAAAGGTT chr4 - 94230402 15368156 15368155 15368316 78862087 78862086 78862247 161 AAAACAAACAACTTTTCTGGTA-AATCTGAGGAGTATGTAAATTATTGCTTTAAAATGAAAAGTATTTAGTAAACCATTCTTGATGCTCAGGGTCTTGTAT---TTGGTCATCTTTGGTTTGTGGTGGTTCACTGCCATGTGTCCTGTGCAAACAAATAAACATT ....:...::-:.....x:...-xx....x.:x....x:x..xx:..:x:...:..x........:..:..:........:..:...xx..:.:.:...x.---:...x.x.......:...x.x:.x.....:::.xx.x....--.:x..:....x...x:.. 10M1I11M1D78M3D41M2I18M 105/158 66.5% 161/94230402 0.0% 7/158 4.4% 2264327 NA +7938 chr4 + 190214555 17633687 17633686 17633894 208 ACCTTGTGGCAGTTTTTGCATCTGTAGACTGGTTGGGTTTGTAGGTCCGGCC-----ACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGTTATTGGAGGGGCATTAATCCTGGAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACGCTGACCACGCGGCTGGGCACGTCCTCCACCTTCTTTTTCTGTTT chr4 - 94230402 15368793 15368792 15369003 78861400 78861399 78861610 211 ACCTTATGGCAGTGCTGCTGTCTGAGGTCTG--TGCTGTTGGAGAACCCACCCTGAGGCATCCAGGACTCTGGTCTAAGCTTGTTGATTTTGTTATTTGAGGAGCACTTCTTTTTGATCTCAAGTCACCACTCAAAAAGCTCTTTGCGTAGGAGGCTAAATTTGGTACACTGACAACACGACTGGGCACCTCAACTGGTCTCTTCTGCTGCTT .....:.......x:.xx::....x:.x...--..xxx...x..:x..x:..-----:..x.::..:..:x....:.....x.x....x.x......x....:...:.xx.::.x..x....::..:.......:....:.......:........x.::..:..:..:.....x..:..:........x..xx.::x::....:.x...:.. 31M2D19M5I156M 141/206 68.4% 211/94230402 0.0% 7/206 3.4% 2264894 NA +8060 chr4 + 190214555 17633687 17633686 17633894 208 ACCTTGTGGCAGTTTTTGCATCTGTAGACTGGTTGGGTTTGTAGGTCCGGCC-----ACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGTTATTGGAGGGGCATTAATCCTGGAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACGCTGACCACGCGGCTGGGCACGTCCTCCACCTTCTTTTTCTGTTT chr4 - 94230402 15374826 15374825 15375036 78855367 78855366 78855577 211 ACCTTATGGCAGTGCTGCTGTCTGAGGTCTG--TGCTGTTGGAGAACCCACCCTGAGGCATCCAGGACTCTGGTCTAAGCTTGTTGATTTTGTTATTTGAGGAGCACTTCTTTTTGATCTCAAGTCACCACTCAAAAAGCTCTTTGCATAGGAGGCTAAATTTGGTACACTGACAACACGACTGGGCACCTCAACTGGTCTCTTCTGCTGCTT .....:.......x:.xx::....x:.x...--..xxx...x..:x..x:..-----:..x.::..:..:x....:.....x.x....x.x......x....:...:.xx.::.x..x....::..:.......:....:................x.::..:..:..:.....x..:..:........x..xx.::x::....:.x...:.. 31M2D19M5I156M 142/206 68.9% 211/94230402 0.0% 7/206 3.4% 2258861 NA +3421 chr4 + 190214555 17638128 17638127 17638257 130 TGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTATTTTTTTTGTT---TTGTTTTGTTTTGTTTTGAGACAGAG----TTTCTCTCTCTGTAGCCCAGGCTGGAGTGCAGGGGTGCAATCAC chr4 - 94230402 64473710 64473709 64473846 29756557 29756556 29756693 137 TGGCTGTTTTTTTCTTTTTTTTTTTTTAGTTTTTGAAAGAATGTGGCTATTATTACAGTTCTCTTTTTTTTTTCTTTTTTCAATCTGAGGCTATTTGCCTTTTTAAAATGCAGCCCTGAGTAAAGGCATACAGTTAC ..x:..:......:.............xx.....xx:...xx.x.x.....x..x:x...---..x....x..:.x....x.:x.x...----...x:..:.:.:x.::x...x.:x....:x...x:.:..:.:.. 60M3I26M4I44M 86/130 66.2% 137/94230402 0.0% 7/130 5.4% -46835582 -47394820 +5803 chr4 + 190214555 17693281 17693280 17693417 137 TTGCATTTGGTCAGGGCTCACCTCAAGCAGAGAATTCTGAAGCTTCACATTGAGGGCTGCTTTCTCTTCTTCCAGCTGCTTTATCTCCTTTTCTGATTTCTTCCTCACTTCCTCCAACTGTGCTTCTACTTCCTAAA chr4 - 94230402 15392533 15392532 15392669 78837734 78837733 78837870 137 TTACATTTAGGACTAGCTTACCTCAAGTGAAGAGTTTTGAAGTTTCCCAGTTAGGGCTTCTTTTTCTTTCTCTAGTTGCTTTATTTCACACTCAGATTTTCTTTTGAATTCATCTAGCTGCATCTGGAGTTCCTAAA ..:.....:.xxxx:...:........:::...:..:.....:...x..x.x......x....:....::..:..:........:..x:x:..x.....::.::.x.x...x..:.:...::::.xx.x........ 137M 92/137 67.2% 137/94230402 0.0% 0/137 0.0% 2300748 NA +3470 chr4 + 190214555 17708665 17708664 17708728 64 ATATATATATATATATATATATATATATATATATATATATATATAGTGTCTGTGTGTGTGTGTG chr4 - 94230402 60813616 60813615 60813679 33416724 33416723 33416787 64 ATACGTGCAGACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGTATCCATG ...::.::.x.:..:.:....:.x............:.....x:.............:.x::.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -43104951 -51125451 +5780 chr4 + 190214555 17708884 17708883 17709152 269 TGCTTTACCTGAATCCTCTCCTTCAGCTTCTGGGCGTACTTCTTCAGGTCACTTATCTTGCGGCCTCTGTGCTCCAGGTCTCCTTCCAGCTTCCGGACCTGAGCCTGCAGGGCTGACTCCTGGACCTGGAAGTTCTTGCGGAGGTCCGACTCCTTCTCCTG--CCACTGC----CACAGGGCCTGGCTCACCGACTGCTGCATGGCCTGCCGGATGGCCTCGTTTTCCCTCTCGTAGGTGGCCTGCAGCTCCTCGGCCTTGCGGGCGTAGTCCTT chr4 - 94230402 15412789 15412788 15413045 78817358 78817357 78817614 257 TACCTTACCTGTATTCTTTCTTTCAGCTTCTGGGAATGTTTCTTCTTCTCATTTATCTTCTGGCTTTTCTCCTCTAGGTCTGCCTCCAGTTTCTTTACCTG------------------CTGCATCCAAAAACCTTTCTCAACCTCTGAGCAATTCCTTTGCTCCATTTCTCTTTGCTGATGATGATTCTTTGTTTCTGTCATGGATTGCTGTGTAGACTCTCTTCCTCTCTCACAAGAGGCTCGCAGTTGATTTGTTTTCTGAGTATACTCTTT .:.:.......x..:..:..:.............x:.::......xxx...:.......x:...:.:.x.x...:......x.:.....:...:xx.....------------------...x.:.:::..::::..x:x:.xx..:..x:xx...:::..--...:.x.----::.x.:xxx..::..x::.x:.x:xx.....x:...:.x:.:.x...x:..:.:.....::.:.x...::....:.xx.:x.::..x:.:.::..x..:.. 101M18D42M2I7M4I101M 150/251 59.8% 257/94230402 0.0% 24/251 9.6% 2296095 NA +12407 chr4 + 190214555 17708884 17708883 17709663 780 TGCTTTACCTGAATCCTCTCCTTCAGCTTCTGGGCGTACTTCTTCAGGTCACTTATCTTGCGGCCTCTGTGCTCCAGGTCTCCTTCCAGCTTCCGGACCTGAGCCTGCAGGGCTGACTCCTGGACCTGGAAGTTCTTGCGGAGGTCCGACTCCTTCTCCTG--CCACTGC----CACAGGGCCTGGCTCACCGACTGCTGCATGGCCTGCCGGATGGCCTCGTTTTCCCTCTCGTAGGTGGCCTGCAGCTCCTCGGCCTTGCGGGCGTAGTCCTTGCTCAGCTGCTGGTTCTCCACTCGCAGCCGCTGCACCTC---TAGCAGGACCTCCTGCATCTCCGGGCC-----------CTGGCCTGGCTCCGACTTGGTTTCAGGGCTCTCCTGGGGCAGCCGGCCCTGCGGGGTAGCCTCGTGG-CTCGTC----AGGTGCTGGAGCCTCCTCTCGTAGTCAGCCTTGAGCTCCAGCATTTCCCTGGAGAGCGTGAGGACTCGCTCGGCGT--GCTCTGCCTCCACCCTCAGCTCTCTCTCCTTCGTCTCCAGCCTGCACGAGGCCGACTCAGCCAGCGCCTCCTCCGTCAGCCTCTTTTGCAGCTCCAGGGCGCTCTCCAGGGCCTGGATGCGCTGT---AGAAGGGCTTCCTCCTCTGCGCAGCCCTGTTCCTGCAGGAGCCTGGCCTTGGTCTCTGCCACCGCATTCTGGAGCTCCTCCTGGTGCGCTTCCCGCAGCGCCTCCATGCTGGCCTCAGCCTCATCCTGGCGGGTGTTCAGGGCATAAATCACCTGC-----AGGAAAATCAACAGA chr4 - 94230402 15397064 15397063 15397845 78832558 78832557 78833339 782 TACCTTACCTGTATTCTTTCTTTCAGCTTCTGGGAATGTTTCTTCTTCTCATTTATCTTCTGGCTTTTCTCCTCTAGGTCTGCCTCCAGTTTCTTTACCTG------------------CTGCATCCAAAAACCTTTCTCAACCTCTGAGCAATTCCTTTGCTCCATTTCTCTTTGCTGATGATGATTCTTTGTTTCTGTCATGGATTGCTGTGTAGACTCTCTTCCTCTCTCACAAGAGGCTCGCAGTTGATTTGTTTTCTGAGTATACTCTTTAATTGCTCCTTGGTTCTCACTCCTCAGGTTTTCCATTTCATTTACTAGAA---CTTGTCCTTCCATGCTGATTTTTTCAGCTAAAATATCTTCATCTAAATTTT----CTCTCCTAGATAGTTTGCATTCATTTAGTAGTCCATTGGTCTCCTCATTTAAATGAGGAAGTTTGTTTTCAAAATCTGCATTGGTATCTACCGTGTCTTTGGAAAGGGCCA--------TCTGCGTCAGTTTTACTTTTGCTCTTGGTTCCCTCTCTTCCACCTGCTTCTTGCACTGTGTTAACTCTGCCAAGGCTTCTTCCTTTACTCTCCTGTGTTGTTCTACTGCAGTTTCAAGGGCTTGAATATGTTTTCTCAGCAATTGTTCTTCTTCAACTTTGCTTTTGTACTGGACAATTGTTTCCTTCATCTCAGCAAGAATGTGCTGAACTTCTTCCTCATGAGCTTCTCTCAGAGCCTGTATACTATCTTCATGTTCATCATTCTTAGTGTTCAGGGCATATATCACCTATACATGAAGAAAAGCAATAGA .:.:.......x..:..:..:.............x:.::......xxx...:.......x:...:.:.x.x...:......x.:.....:...:xx.....------------------...x.:.:::..::::..x:x:.xx..:..x:xx...:::..--...:.x.----::.x.:xxx..::..x::.x:.x:xx.....x:...:.x:.:.x...x:..:.:.....::.:.x...::....:.xx.:x.::..x:.:.::..x..:..:x.::x::x:........xx::.x...x:x:.x..::..---..x:..:.---.:..:x::...:x..:-----------..::xx.:x..:.:x..x::...:----.......:.:xx:x::.xx:::::xx:....:.:xx...-...x..----.::..xx.:..::.x:.:..:x.:..x..x...:xx..:.x.:.x..::....:..x.:x.--------..x....--.:.:.:.:.:::.:..::.:..:.....:.:.::..x.xx.:.....x:x.:::....x....:x..:..:...x.:.x:...:.x..:x.:..:.xx..:x.:..x.....:..:..::.:.x.---..x.:xxx...:..:..x:.x:x..::.xx.x...x.x:.x:x.xx....x:....x..x.xx:::.x...:.x:..:....x:..x.....:.x...x....x:..:..:x.:...xx:.....x.xx:x:..............x.......::-----.:.....x...:... 101M18D42M2I7M4I140M3I8M3D16M11I24M4D39M1I6M4I61M8D7M2I125M3I156M5I15M 430/747 57.6% 782/94230402 0.0% 68/747 9.1% 2311820 NA +3197 chr4 + 190214555 17720861 17720860 17720934 74 GGTGACAGAGAAAGACTTCATCTAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAGAAAAGAAAAAGAAATTA chr4 - 94230402 64682907 64682906 64682980 29547423 29547422 29547496 74 GGTATCAAATATGCATTTCTCTTAAAAATGGTAAAGGAAACAGAAAAAAAAATGAAGAAAAGAGGAAGAAATCA ...:x..:.x.x:x.:...x::......x::x...::...x.....:.....x..........::.......:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -46962046 -47268356 +3035 chr4 + 190214555 17748473 17748472 17748543 71 GACTTTGTCCCTTACTTTAATCCTCTTGTGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAATGTCT chr4 - 94230402 75580347 75580346 75580417 18649986 18649985 18650056 71 GAATTTTTTCCTGGCTCAACAACTCTTGGGTGATTTTTTTTTTGTTTTTTTGTTTTTTTTGTTATATGTCT ..x...x.:...x:..:x.xxx......x..:...........x.......x........:xxxx...... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -57831874 -36398528 +3009 chr4 + 190214555 17760467 17760466 17760523 57 CTCAAAAAAAAAAAAACAAAAACAAACAAACAAACAAAAAACAAAAAACCCTGAAAT chr4 - 94230402 4299057 4299056 4299113 89931290 89931289 89931346 57 CTCAAAAACACAGGAATACAACAAAACAAACAAACAAACAAAAAAAAACCCCACAAT ........x.x.::..:.x..xx...............x..x.........::x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 13461410 NA +3031 chr4 + 190214555 17760469 17760468 17760509 41 CAAAAAAAAAAAAACAAAAACAAACAAACAAACAAAAAACA chr4 - 94230402 40371511 40371510 40371548 53858855 53858854 53858892 38 CAAAAAAAAAAAAACAA---CAAACAAACAAACAAAAAACA .................---..................... 17M3D21M 38/38 100.0% 38/94230402 0.0% 3/38 7.9% -22611042 -71619360 +3017 chr4 + 190214555 17760474 17760473 17760507 34 AAAAAAAAACAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 84107499 84107498 84107532 10122871 10122870 10122904 34 AAGAAAAAACAAAAACAAACAAACAAACAAAAAA ..:............................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -66347025 -27883377 +3136 chr4 + 190214555 17760474 17760473 17760532 59 AAAAAAAAACAAAAACAAACAAACAAACAAAAAACAAAAAACCCTGAAATTCTACAGAA chr4 - 94230402 15215973 15215972 15216031 79014372 79014371 79014430 59 AAAAACAAAACAAAACAAGCAAACAAAAAAAAACCCAAAAACCCAGAGAATGTCCAGAA .....x...xx.......:........x.....x.x........x..:.x.x.x..... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 2544501 NA +5600 chr4 + 190214555 17781070 17781069 17781299 230 CCCGGGCCTCCCGGGAGGCGCATCCGCACTGACTCCCGGCTCGGGCGCCCCGGGCGTGCAGCTCGCTGGCCCGCTGCGCCCCACCTTACCTTGGTGAGCTGGGCGATCTTCTTGCACATTTTCACGTGCATCTGGGGATCACAGTCCATTCTCCAGCCGG--CGCCACCGTCGGCTTTGGAGCCCTGGCAAGTGCCGGGCGGGTTAATTTTGCTGTTGAGAGCAGAAGCCAT chr4 - 94230402 15428270 15428269 15428480 78801923 78801922 78802133 211 CCCTGCCCTCCCGTA----------GCCTCGGCTGCCGGCT---GAGCCCCGAGCGCGGGGCAGCCTCACCTCCCGGGAAGCGACTTACCTTGGTGAGCTGGGCGATCTTCTTGCACATCTGCATGTGAATTT-----CCTTATTGTATCCTTCTGCCGAACTGCCGCGAGGGGCTTTAGATCCATTGCAAGTCCCGGACTGCCGGTTCTTGTTTATGC---CGGAGGCCAT ...x.x.......x:----------..x::.:..x......---.x......:...:.x:..xxx..x:..:x.:.x.xxx.:x...................................:.x..:...x..:.-----:.x:.x.x:..:..:.x....:--:...:.x:xx......:..x..x.x......x....:.x.x:x:x.:...:.xx..x---.:..:..... 15M10D16M3D89M5D22M2I57M3D10M 141/209 67.5% 211/94230402 0.0% 23/209 11.0% 2352800 NA +3016 chr4 + 190214555 17786312 17786311 17786362 51 GATCCTGTCTCTAAAAATAAAAACAAACAAACAAACAAACAAAAAACCCAC chr4 - 94230402 87739073 87739072 87739123 6491280 6491279 6491330 51 GATCCATTTTTTTTAATTAAAAACAAACAAACAAACAAAATAAAAACCCAC .....xx.:.:.xx..x......................xx.......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -69952761 -24277641 +3041 chr4 + 190214555 17808599 17808598 17808645 47 TAAAACAAAACAAAACAAAAAAAAAAACTAACCGAAATATAGTTAGG chr4 - 94230402 48802758 48802757 48802804 45427599 45427598 45427645 47 TAAAACAAAACAAAACAAACAAAAAAACCAACAGAAAGCTAACTGGG ...................x........:...x....xx..::.:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -30994159 -63236243 +5728 chr4 + 190214555 17811074 17811073 17811209 136 AGCCATGGGAGCGGAAAGGAGGCTGCTGTCGATTAAGGAGGCCTTTCGGCTGGCGCAGCAGCCGCACCAGAACCAGGCGAAGCTGGTGGTGGCGCTGAGCCGCACCTACCGCACGGTAAGCGCTCCCGGCCCCGGC chr4 - 94230402 15438420 15438419 15438555 78791848 78791847 78791983 136 AGCCATGTGTCCGGCGAAGAAACCGTTGCAGATCCAAGAGGCCTTCCAGCTGGCTCAGAAGTCTCACCAGAACCGCGCGAAGCTCGCTGTGGCTTTGAAGAGCACCTACAGCCAGGTAGCGGCCCGCGGGGCAGGC .......x.xx...x:.:..::.:.:..:x...:x.:........:.:......x...x..:.x..........:x........x.:x.....x:...:xx........x..xx....:xx..:.x...xx.x... 136M 94/136 69.1% 136/94230402 0.0% 0/136 0.0% 2372654 NA +9611 chr4 + 190214555 17812202 17812201 17812428 227 GGTTTCTTTTGTCTTTCAGATGGATGATAAGACAGTTTTTCATGAGGAGTTCATTCATTACCTTAAATATGTTATGGTGGTCTATAAACGTGAACCAGCTGTGGAGAGGGTAATAGAATTTGCAGCAAAGTTTGTTACCTCATTTCACCAATCAGATATGGAAGATG---ATGAGGAAGAGGAAGATGGTGGC---CTTTTAAATTATTTGTTTACTTTTCTCTTAAAGGTAC chr4 - 94230402 15438648 15438647 15438880 78791523 78791522 78791755 233 GGTTTGGTGCTTCTTTCAGTTAAAAGACAAGGAAGACTTCCATGAGAAGTTCGTTCATTTCCTGAAGTATGTTATGATCATCTACAAGCGGGAGCCAGCCGTGGAGCAGCTGGTCGATTTTGTGGCTAAATTTGTGACTTCGTTTTATCAGACAGAAAAAGAGGATGGTAGTGAGGAAGGGGAGGAAGACAACTTGCTTCTGAATTACGTGTTTAACTTTCTGCTTGAGGTAC .....xx.x:x........x.::.x..:...:x..x:..:......:.....:......x...x..:.........:.x:....:..:..x..:.....:......x:.x.::.x..x....::..x..:.....x..:..:...:.:..:x....x.x:..:....---:........:...:..x.::::.---...:.:.....:x......x:.....x:.x:...... 167M3I23M3I37M 159/227 70.0% 233/94230402 0.0% 6/227 2.6% 2373554 NA +14785 chr4 + 190214555 17812915 17812914 17813241 327 AGTCTCATGAAGCAAACAGCAATGCAGTGAGATTTAGAGTGTGCCTGCTCATAAACAAGCTTTTGGGAAGTATGCCAGAAAATGCTCAGATTGATGATGATGTGTTTGATAAAATTAATAAAGCCATGCTTATTAGATTGAAAGATAAGATTCCAAATGTGAGAATACAGGCAGTTCTGGCGCTTTCACGACTTCAGGATCCCAAGGATGATGAATGCCCAGTGGTTAATGGTGTGT-GTAGTTTCCTAAATCTTTTTTC-----AGATTTGTTGATTTTGTTAAATTCTCAGTATTTGAAATTTTTTATTATG--GTCTATACATTTGAAGAGT chr4 - 94230402 15440011 15440010 15440338 78790065 78790064 78790392 328 AGTCTCACGATGCAAACAGCCATGCGGTTAGGTTTCGAACATGCCAGCTTGTTAATAAGATTTTGGGGAACATGCCAGAGAATGCTCAGATTGATGATGAATTATTTGATAAAATTAATGAAGCTATGCTGATTAGACTTAAAGATAAGTTTTCAAATGTGAGAATTCAAGCTGTTTTGGCCCTGTCAAGGCTTCAAGATCCTAAGGATGAAAACTGTCCTGTTGTTAACAGTAAGTAGTACTTATTT---TCTTTTGTTTAAAAAGGTTCGTTGACTTACGTTAGTTTGC----TTTGAAACGTTTTCTTTTGAAGTGTTTTCTTTTGAAATGT .......:..x.........x....:..x..:...x..:::....x...::.x..:...x.......:.::........:....................xx.:...............:....:.....x......:.x.........x..:.............x..:..x...:....x..x...x.:.....:.....:........x:.x..:..x..x.....::..:x..-...x..x::.---......x.:-----..:..:.....:..xxx.x.:..:x.----.......:x....x..x..--..x.x.x.x......:x.. 237M1I10M3D9M5I26M4D19M2I19M 244/320 76.2% 328/94230402 0.0% 15/320 4.7% 2372904 NA +10464 chr4 + 190214555 17814837 17814836 17815003 167 ATTGCTTTATTTTTAGCATATGCTACTTTGATTGAAAATGATTCAAATCCAGAAGTTAGACGGGCAGTGTTATCATGTATTGCACCATCAGCAAAGACTTTGCCAAAAATTGTAGGGCGCACCAAGGATGTGAAAGAGGCTGTCAGAAAGCTGGCTTATCAGGTAAA chr4 - 94230402 15441768 15441767 15441934 78788469 78788468 78788635 167 ACTATTTTACTTTCAGTTTACAATACACTGCTTGAAAATGATTCAAATTCAGAAGTGAGGCGTGCTGTGCTGTCATGTATTGCTCCATCAGCAAGGACTTTGCCAAAAATTGTAGGCCGTACGATGGATGTAAAGGAAGCTGTCAGGAAGCTAGCATATGAGGTAAA .:.::....:...:..:x..::x...x:..x.................:.......x..:..x..x...:.:...........x..........:.....................x..:..x.x......:..:..:........:.....:..x...x....... 167M 134/167 80.2% 167/94230402 0.0% 0/167 0.0% 2373069 NA +6640 chr4 + 190214555 17815263 17815262 17815364 102 TTATTTTTAAGGTTTTAGCTGAAAAGGTTCATATGAGAGCTATGTCCATTGCTCAGAGAGTAATGCTCCTTCAACAAGGTCTTAATGACAGATCAGGTAAGA chr4 - 94230402 15442614 15442613 15442715 78787688 78787687 78787789 102 TTTTTCTTAAGGTTTTGGCAGAAAAAGTTCACATGAGAGCTCTGTCAATAGCACAGAGAGTAAAACTGCTGCAACAAGGACTTAATGACAGATCTGGTAAGA ..x..:..........:..x.....:.....:.........x....x..x..x..........x:..x..x........x..............x....... 102M 86/102 84.3% 102/94230402 0.0% 0/102 0.0% 2372649 NA +9286 chr4 + 190214555 17817241 17817240 17817456 216 TGTTTCAA---ATGACTCAATAGATGCTGTGAAACAAGCTATGCAGAAGCATCTTCTTCAAGGCTGGTTACGGTTCTCTGAAGGAAATATCTTAGAGTTGCTCCATCGGTTGGATGTAGAAAATTCTTCTGAAGTGGCAGTCTCTGTTCTCAATGCCTTGTTTTCAATAACTCCTCTCAGTGAACTGGTGGGACTCTGTAAAAACAATGATGGCAGGTA chr4 - 94230402 15445539 15445538 15445757 78784646 78784645 78784864 219 TGTTTAAATTCATGTATTATTAGATGCTGTTAGGGAAGTCATGAAGAAGAAATTGCTTCAAGCCTGGTTACAATTTACTGAAGGGGATATTTTAGAACTGCTTCATCGACTGGATGTAGAAAACTGCCCAGAAGTGGCCGTCCCAGTACTCAATGCTGTGTTTTCATTGTCTCCACTTAATGACTGTGTTCAGAACTGCAAATACCTTGACAACAGGTA .....x..---...xx.:.x..........x.::x...::...x.....x.x:.x.......x........::..:x.......::....:.....::....:.....::.............:.x::.x........x...:.x..x........:x........x.:x....x..:.:...x:xx..xx::xx...:...x..xx...:::...... 8M3I208M 153/216 70.8% 219/94230402 0.0% 3/216 1.4% 2371702 NA +8374 chr4 + 190214555 17817936 17817935 17818101 166 AAGGAAATTGATTCCAGTGGAAACATTAACTCCTGAAATTGCTTTGTATTGGTGTGCCCTTTGTGAATATTTGAAATCAAAAGGAGATGAAGGTGAAGAATTTTTAGAGCAGATTTTGCCAGAGCCTGTAGTATATGCAGACTATTTATTGAGGTAAATTTTTTTT chr4 - 94230402 15447469 15447468 15447634 78782769 78782768 78782934 166 AAGAAAACTGATTCCGTTGGAAAACTTAACAGCTGAGAATGTGTTACACTGGAGATGTCTTTGTGAACATCTAAAGTCAAAAGGTGAAGAAGGTGAAGATTTGCTAGAACAGATGTTGCCAGAACCAGCCATATATGCAGATTATTTATTAAGGTACACTGCATTT ...:...:.......:x......xx.....xx....:.x..:x..::.:...x.xxx:.........:..:.:..:........x..x...........x..x:....:.....x........:..x.:x:..........:........:.....x.:.x:x... 166M 123/166 74.1% 166/94230402 0.0% 0/166 0.0% 2370467 NA +8459 chr4 + 190214555 17822968 17822967 17823126 159 TTCTGCTTGT-TTTAGTTACATCCAGAGCATTCCAGTTGTTAATGAAGAACACAGAGGTGATTTTTCCTATATTGGAAATTTGATGACAAAAGAATTCATAGGTCAACAATTGATTCTAATTATTAAGTCTTTGGATACCAGTGAAGAAGGAGGAAGGTA chr4 - 94230402 15449053 15449052 15449212 78781191 78781190 78781350 160 TTCTATTTGGATTCAGTTACATACAAAGCATGCCAGTTCTGGGAGAAGAACAAAGAGAAGACTTTGCTTGTTTTGAAAACCTGATGACAAAAGAATTTATAGGCCAGCAACTGATTCTTATTATAGACTGCATGGACACCACTGAAGAGGGAGGAAGGTA ....::...x-..:........x..:.....x......x.x::x........x....:x..:...x.:.:.x...:...::................:.....:..:...:.......x.....x:.x.x:x....:....x......:........... 10M1I149M 122/159 76.7% 160/94230402 0.0% 1/159 0.6% 2373915 NA +4330 chr4 + 190214555 17824964 17824963 17825061 98 ACAGGTTACAGAAATTATCTCAGAGATTCGGGCGCCCATTGTTACTGTTGGTGTTAATAACGATCCAGCTGATGTAAGAAAGAAAGAACTCAAGGTAA chr4 - 94230402 15451364 15451363 15451461 78778942 78778941 78779039 98 ATAGATTGCAGAAATTGTCTCAGAGGTTCGTGAGCCAATTGTTTCTGTTGACCAGCCTGTTGATGCTGCTGAAATAAGAAAGCAACAGATTAAGGTAA .:..:..:........:........:....x.x...x......x......::xxxxx.:x:...x.x.....x:........x..x.:x.:....... 98M 70/98 71.4% 98/94230402 0.0% 0/98 0.0% 2373600 NA +9579 chr4 + 190214555 17825378 17825377 17825563 186 TTAGATGGCTGAAATAAAAGTTAAGCTTATCGAAGCCAAAGAAGCTTTGGAAAATTGCATTACCTTACAGGATTTTAATCGGGCATCAGAATTAAAAGAAGAAATAAAAGCATTAGAAGATGCCAGAATAAACCTTTTGAAAGAGACAGAGCAACTTGAAATTAAAGAAGTCCACATAGAGAAGGT chr4 - 94230402 15451624 15451623 15451809 78778594 78778593 78778779 186 TCAGTTGGCTGAAATAAAAGTGAAACTTTTTGAAGCAAAAGCAGCTTTGGAAGAGTGCGTTACTCTGCAGGATTTTAACAAAGCATCAGTATTAAAAGAGCAAATAACTGAGTTGGAACACACAAAAACCAATCTGATAAAAGAAGCAGAGCAGTGTGAAATTAATGAAATGCGTGTGGAGAAGGT .:..x................x..:...x.:.....x....x..........:.x...:....::.:...........:x::.......x.........:x......xx.x:..:...x.::.x.:..:x..:..xx.:.....::.......::x.........x...:.x.:::.:........ 186M 137/186 73.7% 186/94230402 0.0% 0/186 0.0% 2373754 NA +4981 chr4 + 190214555 17828276 17828275 17828394 119 AGAATGATGCTGAAACATTGCAGAAATGTCTTATTTTATGCTATGAACTGTTGAAGCAGATGTCCATTTCAACAGGCTTAAGTGCAACCATGAATGGAATCATCGAATCTTTGGTATGT chr4 - 94230402 15452144 15452143 15452262 78778141 78778140 78778259 119 AGAACGATCCTGAAACACTGTTGAAGTGTCTGTTGATGTGTCACGAGCTTCTCAAGATGATGGCCCTTTCTAAAGGAATTGATCCAACCATTAATGAAATAATAGAATCTCTGGTATGT ....:...x........:..:x...:.....xx.xx.:..::.:..:..x:.x...xx....x..x....x.x...xx.x::.x.......x....:...x..x......:........ 119M 84/119 70.6% 119/94230402 0.0% 0/119 0.0% 2376132 NA +6769 chr4 + 190214555 17830987 17830986 17831131 145 TTCATTTTAGATTCTTCCTGGAATAATAAGTATTCATCCTGTTGTAAGAAACCTGGCTGTTTTATGCTTGGGATGCTGTGGACTACAGAATCAGGATTTTGCAAGGAAACACTTCGTATTACTATTGCAGGTAGGATTTATCTTG chr4 - 94230402 15453826 15453825 15453970 78776433 78776432 78776577 145 TTTTTTCCAGATACTTCCTGGTGTAACCAATGTCCATCCAGCTGTGAGAAACATGGCGGTTCTGTGCTTGGGTTGCTGTGCCCTTCAGAGCAAAGAATTTGCTCGACAACATCTTGCATTGCTGTTGCAGGTACAATTTCTATTG ..:x..::....x........x:...:x.:.:.:.....x.:...:......x....x...:.:........x.......xx..x....::x.:..x.....xx.:x....::.:.:...:..:.........x:....x.x... 145M 103/145 71.0% 145/94230402 0.0% 0/145 0.0% 2377161 NA +10116 chr4 + 190214555 17834293 17834292 17834538 246 ATTTAGGTTTTGCAAATTGATGATGTCACAATAAAAATAAGTGCTTTAAAGGCAATCTTTGACCAACTGATGACGTTCGGGATTGAACCATTTAAAACTAAAAAAATCAAAACACTTCATTGTGAAG--GTACA----GAAATAAACAGTGATGATGAGCAAGA------ATCAAAAGAAGTTGAAGAGACTGCTACAGCTAAGAATGTTCTGAAACTCCTTTCTGATTTCTTAGATAGTGAGGTAAGAAATAATCCA chr4 - 94230402 15454740 15454739 15454997 78775406 78775405 78775663 258 ACTTAGGTTTTGCAAATAGATAATCTAAAGGTAAAGCTCAGTGCTTTAAAGGCAATCTTTGATCAGTTGATGCTCTTTGGGATTGAGCCATTCAAAGCTAGAAGGGACAGTGAGCCTCAAAGTGAGGAAGTACATGTTGGAACTGAAAGTTGTGAGGAAGAAGGTGAAACAACAGAGAAGAAAGAAGAGAGTGCTACAATTCACAGCTTCCTGCAGCTTCTTTATGGTTTCTTAGACAGTGAGGTAAGAAATATTACA .:...............x...:..x.x.x::....:x.x.......................:..::.....x:x..:........:.....:...:...:..:::x..:x:x:.:...xx....:.--.....----.:..:x:.x...x:...x..:x...:------.x..:.::.::xx.......x.......::.x.x.::x.:...x.:..:....x..:.........:................x.x.. 127M2I5M4I26M6I88M 175/246 71.1% 258/94230402 0.0% 12/246 4.9% 2379553 NA +11170 chr4 + 190214555 17837155 17837154 17837353 199 TTAGGTATCTGAACTTAGGACTGGAGCTGCAGAAGGACTAGCCAAGCTGATGTTCTCTGGGCTTTTGGTCAGCAGCAGGATTCTTTCTCGTCTTATTTTGTTATGGTACAATCCTGTGACTGAAGAGGATGTTCAACTTCGACATTGCCTAGGCGTGTTCTTCCCCGTGTTTGCTTATGCAAGCAGGTATTGAGTCATA chr4 - 94230402 15455301 15455300 15455499 78774904 78774903 78775102 199 TCAGTTTTCAGAACTCAGAACGGAAGCTGCAGAAGGCATAGCCAAACTGATGTTTTCTGGGAGGCTGATAAGTGCCAAACTTCTTTCACGTCTCGTTTTGTTGTGGTATAATCCTGTGACTGAAGAGGACACTCAACTTAGGCATTGTCTGGGAGTTTTCTTCCCTTTATATGCTTATGCAAATAGGTATGGCTTCata .:..x.x..x.....:..:..x.:............xx.......:........:......xxx:..:.x..::x..::x.......x.....::.......:.....:....................:::.......x.:.....:..:..x..x........:x.:.x...........::......x.xx..... 199M 152/199 76.4% 199/94230402 0.0% 0/199 0.0% 2381854 NA +10408 chr4 + 190214555 17837622 17837621 17837803 182 AATAGGACTAATCAGGAATGCTTTGAAGAAGCTTTTCTTCCAACCCTGCAAACACTGGCCAATGCCCCTGCATCTTCTCCTTTAGCTGAAATTGATATCACAAATGTTGCTGAGTTACTTGTAGATTTGACAAGACCAAGTGGATTAAATCCTCAGGCCAAGACTTCCCAAGATTATCAGGT chr4 - 94230402 15456619 15456618 15456800 78773603 78773602 78773784 182 AACAGATCGAACCAGGAGTGCTTTGAGGAAGCTTATCTTCCAACTCTGCGAACGCTCTTAAATGCTCCTGCAACTTCACCTTTGGCTGAAATAGATATCAGTAATGTTTCTGAGCTGTTGGTGGATCTGACCAGACCGAGTGGACTGAGACCTCAGGCTAAAAAGTCTCAGGAGTATCAGGT ..:..:x.x..:.....:........:.......x.........:....:...:..xx:x.....:......x....x.....:........x.......xx......x.....:.::.x..:...:....x.....:......:.:.:x........:..:.xx..:..:..x........ 182M 140/182 76.9% 182/94230402 0.0% 0/182 0.0% 2381003 NA +8605 chr4 + 190214555 17839599 17839598 17839840 242 TATTTGTTAGATGTGTAAGACTATATAATAATCATAATCATCTTCAATTTACAGAGAATTTTC----------------TCTTAATTTTTT-------AGGCCTTAACAGTACATGACAATTTGGCTATGAAAATTTGCAATGAGATCTTAACAAGTCCGTGCTCGCCAGAAATTCGAGTCTATACAAAAGCCTTGAGTTCTTTAGAACTCAGTAGCCATCTTGCAAAAGATCTTCTGGTTCTATTGAATGAGATTCTGGAGGTA chr4 - 94230402 15457085 15457084 15457344 78773059 78773058 78773318 260 TAATTATTAGCTGTCTAAAT---TAGAATGATC-TAGTTGTTGT-AATTTGTAAATAATTTTCAGTGAAATTCCGTGCATCTGATTTCTTTCTCTCACAGGACTTAACAGTGCATGATAATTTGGCATTGAAGATTTGCAATGAGATCTTGATGGACCCAACTGCGCCCGATGTTCGTATTTATGCGAGAGCTTTAAGTTTGTTGGAGATCAGTAGTTCTTCCACAGAGAATCTTCTGCTTCTGCTTGATGAGATTTTAGAGGTA ..x..:....x...x...:x---..x...:...-..:.::.:x.-.....::.:.x.......----------------...x.x..:...-------...x.........:.....:........xx....:.................:.:::::..:xx:x....x..x:....x:.:...:.:.:...:..:....:x..:..:x.......::x.::::..:.::........x....::.x:........:.:...... 20M3D10M1D10M1D18M16I12M7I167M 167/237 70.5% 260/94230402 0.0% 28/237 11.8% 2382514 NA +4027 chr4 + 190214555 17843297 17843296 17843395 99 TTTAGTGATCATGAAGTTCCAGAACCAGAATCAGAAATGAAGATGAGACTACCAAGACGAGCCAAAACCGCAGCACTAGAAAAAAGTAAACTTAACCTT chr4 - 94230402 15460979 15460978 15461077 78769326 78769325 78769424 99 TTCAGCGATGATGAAATGCCAGAATCAGTCCCAGTGCCAAGTTCGAGGCCTTCAAGGCGAGCAAAAACTGCAGCACTTGAAAAAACAAGAATGAATCTT ..:..:...x.....:.x......:...xx:...x:x::.:xx:...:.:x:....:.....x.....:........x.......xx.:.x.x..:... 99M 67/99 67.7% 99/94230402 0.0% 0/99 0.0% 2382318 NA +22112 chr4 + 190214555 17845264 17845263 17845921 658 TGAAGGAGATTTACTTCTAAGAGATACCTTTGCCTTTTCTTTCACCAATTTGCTTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTATAAATCACAAT-GTGTTATATATTAAAACTTTGTGCACAGAAATAAAACTAGGGA-CAATTACGTATTTAAACTTAGGG--CATAAAAAATTCACATAATACCACTAAAAGAGAAACATCAAAATCCG---------TTTAC----AAAATTCCACAATGATCTGATGTAAAA---CATGTAAAAAAAACATATAAAGAATA-TA-ATCAAAATGATTAATGCTAATGATTTAATATAAAGACAAATCACAGGACTAGAAATACTTCAAGATCAAT-TGATAAATGCTTATTGTTCAGAAGGAA-----------TACTGACATACAAAATAAAGATAGTGCAAGAAGAACTGCAATCTATTT---CTCTTCGCTTTTGAGATTTTGGTTATGAACTGTACAGCTCGTTAGAGATGCTGTTGTCAAATTCAGATTCCATTCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACATTCAGTTTCTCATCAGTTTTCACTTGTAGCATGCTGGAAGAAAAAGTGTAAGG chr4 - 94230402 15466634 15466633 15467287 78763116 78763115 78763769 654 TGAAGGAGATCTC--------GGATAC-TTTACCTTCTCGTT-ACAGCTTTGCTTCGAGGTAGTCAGTCTCCACCTGGTACACATTTGTT----GGAATTGTTATTACCATAAATCGTTACA-TGGTGACTT---ATGCCACAATTACGTCATATATTAAC-TTCCGTGCACGAAAATAAAATTGGGAAGCAATAA-----TTAAACTTAGAGAACATAGAAAAATCACA--ATACTATTGAAGGGGAA-CATCTGATTCTGATATAAATTTGTACTGCAAGAATTCCATGAGAGTGAGATGTGAAATTTCATATTGAAAAAA-----AAATAATAGTACATCAAAATGAATAATGCTAATAGT--AATATAAAGCCAAATCACA----CAAGATCATTTCATGATCAATGTAATAAATGCTTATTATTCAGCAGAAAAAAAAAATCAAGAACAATGTACAAAATAA---TAGTGCAAGAACAGCTGCAATCTATTTGTTCTCCTCAGTTTTGAGATTTTGGTTAAAAACTTTACAGCTGGCAAGAGATGCTGTTGAAAAACTCAGATTCCACTCAGTGGGCTGATTAAGGCACATCTTTATGGACTTCAAATGTTCATTTTCTGTGTTCACATCTATTGAATTCTGCGGCTCAGAGACTTTCACTTGTAGCGTGCTGTGAGAAAAGAAGTGGGG ..........:.x--------:.....-...:....:..x..-..x:x................::..x........x.x:...x:..:.----..xxxx.....:.:..:.....x.....-.:x.::...---.x::......-::..:.........x-:.::......::........:.:..:.-....x.-----..........:.--....:....x.....--....:.:.:..:.:...-....x:.x..:.---------.x...----.:.......::.x::.xx.....:...---...:.x:......-----...x....-..-..........x..........::.--.........x.........----:.::.x:.:....x.......-.:.............:.....x..:..-----------x.x::.::..........---...........x.:.............---...:..:x.................x:....x.......x.:x.............xx...:..........:...:....x:................x....:x:.....x.x:x.:..x....:...x....x:x::x....x.:xx....xx:::.............:.....x:......::x..::.. 13M8D6M1D14M1D47M4D28M1D9M3D10M1I15M1D27M1I6M5D12M2I15M2D17M1D12M9I5M4I27M3I13M5D8M1I2M1I24M2D19M4D21M1I27M11I18M3D27M3I195M 471/617 76.3% 654/94230402 0.0% 78/617 12.6% 2378630 NA +161298 chr4 + 190214555 17873339 17873338 17878265 4927 CTCAAGGCACCTACAATGAAACTTTAAAATTAAGTAGAGAA---GAACTTACCTA---GGGATTTGGAAAAATAGTTTGCCATTTGTCCACTGTTGCAAGACTGTCGTTTATGTCTTTTTGTTGACATTT----CTGTGATCTTCCATGGTGGTCTTTTTCTTTTGTTCAAATTGCTAAGAACTTCAAAACTATCAG---GATTCTTGTCAAAGTTAACACATTTGCTTAATTTACTATTGCCAAGATGGTCAGCAAATTCATCAGCT------GAAGGATTATTTGTGTTAGCATTTTCTATTTCTTTAGATTGCTTTTTAAAAGAATTTTGCCTAGCAGAATGAGATCTTAAAGTAAAGCGCTTTGATTCTTCCATATGAGTCTGATGAGTATTTCCACTGTCAGTAGATTCAGGAGAGTAAATGATTGTATTTAGCTTAAAAGTATTTCTGTGTTCAAGACAGTTGAGCTTCCTCAAAAATATTCTACAGTCTTTTAAGGTTTTTGACCTCCAACTATTAGGACATACATTTTCTAGTCTTGGTCCCTTTTGAAAGTCTTTTTGGCTGCAATTTGTTCCATTCTCTTTTGCTTCTGACTTAAATTTATTCTCAAAACTAGCATGTATTTTGAAGTCAGGCATTACTACCCTCTGCTG--CAAGT-CACCCCTGA------TCTCAGGTGGCAAAACAC------------------------------ACTGATTATCTACTATGCTTTTTCCTTGGAGT---GGGATGTCAGCATTTGTTTCTCCCTCAGTCTTATTTAAAAATTGGTTCTGGCAGAAAAATCTTAAGTTTCTCCTTTTAGAGTTCCAGTCAACTGTTCCATGGTTGTGCAGCTTTCCCTCTCTTT---TCCACCTTTCATGATGCAACCTCTTAAACTCAGTCCTTTTTAATCTAGCTATTGCTAAATTACTTTTCACATTTAAGAGTGGAGAGTTAGCCACTTTATGCAGTATATGCAATTTCTCTGCTGATTTTGAAGGAGAAGAGAGTGCAAATTTTTTAAAGTGCTTTCTGAAGGGGCTGGCATTAAAGTCAGAATATTTGGTCCCTAATTTGATTCCCCTGGTATTTATTACTTCCAAAGGGTTTCGGGCATTTGCTTTTCTAACTAGTGAAAGAGACTGTGTTTCTGTTGTTTGCATAAACCAAGTACAGAGTTCATTCAAATCATACTTTTTCTGAAAAAGCATTTTTACAGGTGAAACTTCAAGTTCTAAAAGACAAGTTTCCAAAGGGCTTGCTACTT---TGAAATGATCATTTTCAATGTGTTCTCTTTTTTTATGAATACAATTTTCAGCTTCATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTAATTCCTCTAATAAGGAATCATTTGAAGCAGAAGTAGCCCACCACCTGAGCAAAGGGTTTGATGAAATTATAGGATCCAAGGATACTTCAGAAATAGGTACTAATTTATTATCTTCCAAACACTTTTTTGCATTCCGCGAAAGTCTGTTTCTTGGGGTATCTTTGTAAGCTATTTTCATCTTTGAGTGCCTATGTTTTTCCTTCTGACTTTTATTTTTCTGCAAATGCAGTTTATATGATTTATGGAGCAGAGCGTTTCTATAAATAAGTGAGCTAGAAGATGCTAATGAATGTAAGAAATGCAGAGATGGTTTTCTATCCCTAATAGAATGTCTCAAAGG------------------TACAGTAGCAATCATACGTTTTGATCCATTTTT----AAATATATCAGCTTCAGTGTGCCTTATTTTATCCATTTGAGTGCACTGTTGGTCATACTTTTCTTCAGGCAGATTTTTTCCTGACGTATTATCCTGTTCTAAAGGAGGCAAGCAGCTGCTAATACTTACTTCTCTTTCCTGAGGTGAAGTTCTATTAATAGTCACAGATATGCCAGAGATTTTCACTTTTGCCGGTCTACCAGGCTTCCTACTTATTGCCAAAGGCTTCTGATTTGGTCGAATAATGTTCTTGGAAGGCTGAGGTATCACAGATTTGTTCTTGATGGGTCTCACATATTCAAAGCCAGACCCCAAGATCTCACTTTCAGTAGTCAAGCTTGCTACAGCACTTATTCTTTCACCCAAGTCAATTTTGTCTTCACTAATATTTCTGGGACTATTATATTCAGTTGGAAAATCACCAGCATTATTGTTTAAAGACATAAGGTTGCTTATGTTTACCCTTCCTTCAGAAACATGCCTTTTAGTTCTTCTTGACCTTCCGTAAATAACAGTTACTGTAATACTCTTTTTATAAATACCTTCTTTTACTTCTGATATGAGACATTCTGGGCTTTTCCTTCCAGCACTAAAGGGCTCATTCTGGCAAACAGTGATGTTTGTTTGATCAATTTTAGGCTTTGGTGGTCTTCCAATTGGTCGCTTAATCTGTTTCACAACTTGGGGACCTATTTTTTTTGGTCTACCTGGTTTTCTTTTAAAAGATGGATCAGTAGCACTGCTTGAATTGTCCTTAGGTTCTTCTTGTGGCTTATCACTATTTATATCACCTATAAACATTGTAGAGGATCCTGCAGTTTCTTTTGCATGACTGAATTTGTTTAGTTCTCTTTGAAAAGTATCAGTATCATAATGACTGGAGTGATAATTTTCAGAGTTCGCATTTGAGATATCCTCATTTGTTTCTGTTTTTTCTTCAGTTACGTGATGGGTTGTAGGTTTTTCAGAAGGGAGAACAACATTTGAAT---------GGGAAGTGCCAACTGAAGTTAAAGTATATTTGACCCCTTCACTACTTTTAACCTCAGATAAAAACATGAGTTTGATAGGACTAGAATAGTTGGAAACAGATGAACTTTCAGTACCTTCATATTTTGCTGGTACATTTTCAACACTGGAAATCAAGCGACCCATATCTAAAATAGATGACTTTTTCAGATTTTCA--AGTCTTTTG--TTATTCAAATCCACTG-----TAGGCATGCAGTGACTATTGATAATATTGCCGGATGCTACCACAGATTTTGAT--------AAGCTCTGTTCTTTGCATGTCATTCTATTTAGAGTAAGAGTCATATTTCTGTCAGCATGTTGGTC---------TTTACCATCAATTTCTATCAATTTCTTGGATGCTTTATATCCTTCTGATAATGGCTGATTATTCCAGGATTTTTTGGCTATACTTATTGTATCTTCCAAACGCTTCACAACCACTTGTAAATTAGAATTCATTGCAATTTTGTTTAGGTCTATATTGTGTGAGCTTTCAATGTGAATATTTTTCACTGGAT-CGTTTTTTGTTGTGGATTCGGATACTTTTTTGGCTTTAGGGGATTTTTTAAAAACATAATTATTTGTTACATATACAGAATACCACCCTGGAGGCACAATATTTCGTTTAGTTCTGCTCAAAAGTCCAGAAACATCATTTCTCAAAAGAGTTTGAGTATTACCTAACTTTGGATTTTTCCTATCATTTTGCAAAAATT---GTTTTCCATCTGCAGATTTCTCCTG--TGGCTTTCTTATGCTCATTTTCTCAGGGGAAGTTGTTTTAAAGCTTTCTGAAAATTCATTAAAAGACAAGTTAGTTTCTGAACTATGAAGAGGTAGTTGCAGTGACTGTAATGCATAATTTGGTGAAAATGATGTTTCAGCATG---ATTTTTACCTTGAAGTCTTTTAGAATTTTGTAAAGA-AGGCCCTTGGTCATGATAGAATTCT--CCTTTGTCTGATGAAGATATCTCATT---GTTTTGTGTCAATTTCCTTGAACTTTTTTCGG---TGTATTTTTTTCTTGTAAAATTTTCATCAAGACTAGCAAGTTCTCTTTTTATCTGTAAAGACTGCCTTCTAAACATGGGTGAATCAGAGGAGTTGCGCATTGCAAATAAAGTTTCTTGACGCTTTCGAAATCTTGTCTGAATAATTTTATTTTCTACCTTTTTATCATGTTGACTCAATAATTCCATAAAACTATAATCACTGGCTTTTGCATTATGCAAGAGAGATGTTATGAAATCTCCCAATTTTAAATCATTATATGTATTATAATCACTGCTAGATAATTTTACAAGGCT---TGTCATATCCGTGGTTTCTATTGATTTTAGTTTTTCATTAATGCGATCCATTAAATCTTGAAAAATTACAGCAGTTTCACCTTTTTCATGATTTGTAG------TAGAATTATTGCTGTCAT---TTGAGAGTAAAGAATAAGAGTTACTGGATTTT---TTAGTTTT-----AAGTATTTTATCTTGATGATCACTCTTATTGCTGCTGATTTCTGCTGGTGTGAGAGATGGAGGCTGGTTAATGTTTGCTTCAAGTTTGTTATTTTCTAAGGCTGAAATCTCTGAGATGACGTCTTTCAATTTTTCAAATCCTTCAGTTTCTATAGGTGATAATGGTGGGGGTGAGGGACTTCGAGATCTACAGGCATCTTTAAGAGTGACTGAAAGATCACATACTTCCTTTGACAAAAGAGGACTACGAAAGGCTGATTTTGTAGAGTGAATG------TTTGGTAACAGTCCAGAACAGCACCTGTGAGAATTATAACTGTCTGCAATTCCTCTATTCACTACTGGCTTAACGTGTTCAACAGTTACAGTTTGGCAAGATAAACAATGTAAATCTTTAATACAGACTGGCAGAGGTTCTAAACCAGGGCTTTGTTTTTCGTTTTGTAAACAACCTCTTTCTGCCAGCCTATATTC---ACAACTACAGAACAGACCACATAAATCATCTTCGATTAAGGGCTTTTGAGATTCTGAAGACACAACACATGATGTATTACAACAGCAAAGAGAAGCAGCATTCTGCTCTTGGACTAGAAATTTCAACATAGCCAAAACTTGTTGCTGGTGATGTATGCACAAAGATTCCAAAACTTTGTTTAATGCTGATTTTCTTTTTTCCATTTTAGTAGCTTCCTCTGATTTTGCATCAACAG------TTGAACTAAAAATAAAAA-----TCAAACAAAAAATGAATTGCAGCAAAAATACCACTATAA chr4 - 94230402 15480044 15480043 15485004 78745399 78745398 78750359 4961 CTCTAATTATTTAAGATTGCAATTTAAGGCGAGGGGGGGAACAGGAACTTACCTACTTGGCACTTTGGGTAATAAGCTGCCATTTGTCCACTATTGTATGATTGTCTCTTATGCCTTTTTCTT-ACATTTGTATCAGTGGTCTCCCATTGTGGACTTTTTCTTTTGTTTATTCTGATAAGAACTTCAGAACTACCAGCAGGATTATCATCATGGCTTACACCACTACTTAATTCTCTGCTGTGAAACTGGTCATCCAGTCTTTCAGTCACTTTAGAAGAATTAGATCCTTTAGGTGTTTCCATTTCATTCTCTTGTTTCTTTAATGCGTTTTGCTTAGTAGAATGGGACCTCAAAAGAGGATGTCTTTTTTCTTCCAAATAGGCCTGATGG---CTTTTACTTGCAACAGCTTCAGGAGAATAAATGACATTATTTAACTTAAACGAATTGTGCTGCTCAACATGGCTGAGTTTTCTCAGAAATATTCTACAATCTTTAAAGGTTTTGGCTTTCCATGTATTTGGAAACAGTTTATCTTGGCTTTGTCCTTTTCTAACATTCTGTTGGCAACAAATTGTTCCATTTGTCTCTGTGTGTGACTTAAGTATATTTGCTAAACTGGGATGTGGGTTAAAGTCAGAAGATCCCATCATCTGTTGAACAAATGCATCTCTGGCTTCATTCTCAGTTGGCAAGAGGCTACTCTGAGATTCTACCAAAGTTTGAGTGGGCTGGATTTCTACTGTATTTTTTTCCTGGAGCACAGGCATTCCATCACTGCTTTCCCCACTTGCACTTTTAAACAACTGGCTTTGGCAAAAAAACTGTAAATTTTTCTTTTTCGATTTCCAGCCTCCAGGAGCCTGGCTATACAGCTTTTTTTTTGTTTGTCCCCACCTATCATTCTGTAACTTTTTAAATTCATTTCTTTTTAATCTGGCTAATGTGAAATTACTTTTCATGCTTAAGACTGGAGACCTCACCATATTGTGTAATATTTGCAATTTCCCTGCTGGTTTTGAAGGAGAGGATAGTGCAAACTTCTTAAAGTGCTTTCTGAAAAGGCAAGTACTAAGATCAGATTGCTTATTTTCCATCTTTATCTCCCTAGTACTAACTACTTCTAAAGGATTGCGAGCATTTGCCTTTCTCACTAGTGAGAGAGACTGCGTTTCCGTAGTTTGCATAAACCAGGTGCAGAGCTCATTCATGTTACACTTTTTCTGAAAAAGCATTTTTATAGGTGATGTTTCAATTTCTACAAGGCAGGAGTCTAAAGGGTTTGACATTTCACTGTTACAGTCTTGTTCAGTGGGATCCCTGTTTTCACATACACATTTATCAAACTCATTTCCCCCCACTCGCAACCAGGTATTAGTTATCTGTTCAAATCTATTATTTAATTCTTCCATCAAAGTGTCATTTGAAGCGGAAGTAGCCCACCACCTGAGAGAAGGCTTTGATGAAAAAATGGGATCCGATGATACATCATTAATGGGCCCAAAATCACCGTCCTCAAGATTCATTTTTGAATTTCCTGAATTTCTCATTTCTGAGGTATCTGTGGATGTTATGCTCTGATTTGATTGCCTACGTTTTTCCTTTTGATCTTTAGCTTTTCTCAAATGGAGTTTGTAAGATTTATGCAGCAAGGCACTTCTACAAGTAAATGCACTAGAGGATGCTAATGAATGTAAGAAATGCAGTGAGGGCTTTCTGTCTCTAACAGAGTGTCTCAATGGAATCTCACGTTTTCTTGACACCGTTGTAGTAACACTGTTTGATCCATCTTCTCTAGAATCTTTCTGC----ACACTCTTTACTTGACTCATATTATTGCACAGCTGATTGTTTCTCTCCTGTGATATGTTTTTTTCTAACAAGTTCTGCTGTTGTAAAGGAGGCAAACAGTTGCTAATGCTCACTTTTCTTTCCTGAGGTGAAACTCTATTAACAGTCACAGATATGCCAGAAATTTTTACTTTTGCTGGCCGACCAGGCTTTCGAATGGTAGTTAATGGTTTCTTAACTGGCCGTATAATATTGCTGCAAGGATGCGGTGATGCTAGGTTGCTCTTGATGGGTCTAACGTAGTCATAACCAG------AGACCTCATTTTCAGTAGAAGAATTCTGTAAGGCTTTCACTATTTCAGTCAAAGCATTTTCAGTTTCTGCGGTACGCCTCGCTTTGCTGTGGTCATTGGCAAAACTGAAGTCAACCTGTTCTCTGGGCAGAGTGGTGATTACACTTAGATTACCTTCAGAAACATGTCTTTTAGTTCTTCTTGACCTTCCGAAAACAACTGTCACAGTAATATTTTTGTTGCTGTTAACTTCTTCCATTACTGATGCATCGGATTTGGTACTTTTA---CCATCACTGTTGAGTTCAGCTCTACATTCTCTCCTTTCAGTTACATCTACTTTTGGTTTTGGAGGCCGCCCAATAGGTCTCTTAACCTGCTTAACAACTTGAGGACCTATTTTCTTTGGTCTACCAGGCTTTCTTTTTAAAACAGAGTCACCACTATTGCTTGGTTTCTCCACAACTTCGTTTTGT---TTTGAATCATTTAAGTTAGTTTGACCAACTGCACAGGAGCTTGTAATTGCTTCTGCACAAACACAGC--TTGATTCCTCCTTG----GCACTGTTTTCAAAATCACTGA------------CACAGATTGCATGAGACAGATTCTCTGTGGTCTGTTTGTCTAACACAGT---------GCTTGT--GTACCCCTGAAAGGAACA-AATATCTGTACTTCCTTTAGAAGATGTAGTTGCAGATGTCAAAGTATATTTGATACCTTCACTGCTATTAACCTCTGAGACAAACATAAGCTTAACAGGACTTGAGTAGCTTAAGGAAGATGGTAATTCCCTAGCGTCAGAAGTTGCATGCAAGGCCTCATTGCTGGATGTAGATAAATCAATGCTCAGA------GACTTCAAAAGGCTGTCATTAATTTCTTGATCTATAAACATTTCTTGCTTGCTTGTCACACACACAGTTTCGTTTTTATTGCTGTTTG-----ACAAATGTGAATGTGGAAGGAAGCTTTGTCCTGTGCATCCCGTTTCACCCACACTGAAAGGGAAGTCTCTTCTGGCAAGTGGGTTCATAACCTGTTCATAAGCATTATCTTTTACTTTTTGGCTTATTTTGTAACTATTTAACCATGA------ATTGCTAGCCTTTTTAGCTAAGTTAATTGTATCTTCTAACCGCTCTACAACAACTTGTAGATTTGTGTCTCTCACAATTTTGCTTATATTTATGTCACAGCATCTTTCAGCATGGACATCTTCATCTATTTGCATTTTTTCCAAACATTCCACAGACTTCTTT-GCATCAGATGATTTTCTGAATACAATATTGTTTGTTACATACACAGAGTACCATCCAGGAGGCACAATGTTGCGTTTAGTTCTGCCTGGGGTTCTGTTACTTTCCCCATGCAGAGGAATCTGATCAGTCTCT---TTTAGA-------------GTTGCAAAATCTTGAGTTTT-----TGCAGATTTAGTCTGGTTGGCTGCAAAAGCACTGTCTTCTGAAAGAA-----------------CTAGAAAGTCA---------GAGCTGGTTTGAAAATTAGGAAGAGGTAGTTTGAAAGACTCTGTTTGGTGTACTGGAAAACATACTTGTTTGGTATGGCAATTCATACAAGGATTACTTTCAAGACATTGCAAAGCTTTATCTTCTATCACAGTTAATCTGTGCCTTTTGTT---TGGGTATATCTTATCAAAACTCTTTGCAGATTTCTTAGCATTCCTCTCAGAAATTGACTTTTTTCTTACAAAAGTTTCATCAAGGCTTGCAAGCTGTCTCTTGATTTGCAAAGACTGTCGTCGAATATATGGTGAATCGGGAGAGTTATACATTGCAAATAAAGTTTCCTGACGCTTTCGAAATCTTGTTTGGATTATTTTATTTTCCATTTGCTTATCATGTTGGCGAAGTAATTCCATAAAACTATAATCGCTTGCCTTAGCATTATGCAAAAGGGAGGTTATAAAGTCTCCTAATTTTACATCGTTTTCTGGTGCCCTGTCACTGCTAGAAAATTTTACAAGATTTGCTGCTATATCTGTAGTGTCTATTGATTTTAACTTTTCATTAATACGGTCCATTAAATCTTGGAAAAT---GGCATGTTCACCTTTCTCAGCCTTCTCAGAACTTATATAATTGTTGTCTTCATCTGTTGATTGCAATGTTCCAG-----CTGAATATTCAGTCACTTTTCCTCCACAAGTTTTGTTTCCATATTCAAATTCCCCATTGCTTCCTTCAGCTGGCAAGAGGTATGGAGGCTGGTTGACAGATATTTCAGGCTTGTTATTGTCTAAAATTGGAAAATCCATAATTGATCCTTCCACTGTCTCAAATTCTTTATCCTGCACAGGTGACAGTGGTGGCGGTGATGGGCTGCGAGATCTATTTGAATTTTTAATGCTGTTTAAAAGATCACAGTCCGTAATTGA------AGATGTACATGCTACTGCTTTCATAGAATGCTTGGTAGAATTTTGCAATTGTTCAGCACAATACTTATGAGAACTACA------------TGTTTTGTTCACCATGGTCTTAATACATCCAATCGCTACAGCTTGGCATGACAAAGAATGGAAATCTTTAATACAAATAGGCAGAGGTGGTAAATAAGTGTTTGGTATTTGATTTTGTAAACAGCACCTTTTTGTTATCATATGTCCTTTGCAATTGCAAAATGAAACATGAACATCTTCTTCAGTAAGGAAACTGGGAGTTTCAGAGTGGACTGAATGTGTTTGTTTGCAACTGCAAACTATAGGAACGTTTTCATCTTGCATTAAAAATTTTAACATAGCCAAAGTCTGTTGCCAGTGATATGAACAAAAAGACTCCAAAACTTTGTTTAATGCTGATTTTCCTTTTTCCAAACTAGTAGTTTCCTCTGAATTTGCATCAGCTGTTGAGCTTGAACTGAAAATGAAAACAAATCAAAACAAAACATAAATTACAGTAAAA----CACCATAA 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41M3I11M3I65M1D6M4I63M3I68M6I117M3D266M2I5M1I9M6I18M30I32M3I124M3I399M3I448M18I33M4I12M4D292M6D266M3D186M3D67M2D14M4D22M12D49M9D6M2D18M1D11M9I170M6D18M2I9M2I16M5I36M5D12M8I65M9I54M6D131M1I31M1D132M3D6M13D12M3I5M5D15M2I30M17D11M9D77M3I36M1I25M2I8M3D15M3I32M3I295M3I66M3D29M6I18M3I18M5D9M3I8M5I234M6D34M6I38M12D147M3I236M6I18M5I27M4D8M 3243/4779 67.9% 4961/94230402 0.0% 330/4779 6.9% 2393295 NA +270573 chr4 + 190214555 17880571 17880570 17886167 5597 AGTAAATCAAACAAGTCAGTGTAGTCAG-------------------TTTTTTTCTTTTCTTTTCTTTTTTTCTTTTACTGAATGAGTAAATCAATCACACACCAACAGTGTTGTAAATTTAAGTGCAAAAGCATTGAAGTGCTTTACTACAAATTACAACCTAGAAACACGTTAACTGAACAATTAAAATTCATACAATCAGATTTAGATATATAACAACACAAAGTAGGAACAGAATTACAGTACATTTACAACACAAGACAGATACATG-AATTCATTAGAAAATATTGTAATAAATAATTCATGAATTATAGTGCAATTGATTTATGCATAAATATAACTAATTGCCTAACAATCAGTTTATATTAACAAAA-TCTGTCAAAA-TCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGCAATTAAAAAACAAATACAAGTATTTGTACTGTAAACAACTAAAAAAATCAGTCTCACTAAAGTTAGTATACAATTTAATATAAAATTGTCATTAGCTACCAGAAATGGTTTAAACAACTTTACTGAGCAGTAGTTTTCTAAAAACAGAGGCACTGTTTTCTCTTTTCCTTCTTTTTTTTTTTAATATAAAATACTTGAGGAACATTCAAATAAGTAGAAAGCACATAAGGGTTGCTTTCACCTTCATT---AAGTCTGCTGAAACGGGATTTTTCAGAAAATTGTCAATTAATAAATAGTAACTGGTAACTAAATTCATAAAGTACTTTGAAA-GTTTAACATAAAGGTCATCTTAATAGAATCACTGGGG----AGAAGGGGAAT--------TTCCCTGCCTTTCCTAGTTTGTATAATCAAATGTTAACTCAATAAT-AGAAATG-----TTTTGTTTCTTTTAAAAGTTATGGGTTGATTATTACCTATAAACTATCAAAAAATATTTTAATTTACTATTTCTGACCAAAAATAAATAATACAAGTACTAAAATGCTGCAAATTAACTATAATATTACCTATAAAACTACTGATTACTGTGAAGTCAATAGCAAAATGATCCCTGATTT-ATGAATCCTGTAAAGTTTTTGGTCAGGTCATCTTTTAAATGATACAAAA-GTGTTCTGTAAGTTTCCCTTTACTATAAACTTCTCAATCAATTTATTAATGTAAATATAGTGTGAGGAATAAAAAAGCTCAATACAATATAAATATTATGTAATGCATTCAAAGCCCCCAAAGTTTTCCAAGTAAAATTCTGTATAAAGAGGTCAATAAAATTGTTTTGAAATATGTACTTTACCTTTAACTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGT--TCTGGCCCTCACAAAATATGGCTTAATTCTTTAAAAA-GAAAGATGACCCTGACATCTGCTGTTCTGTAATCT----ATTATGTATATTTT--CTTGGGGTGAAAAAAAAAAAAAAGAGGATTCATACCCTAGTGTGCAGGTAA-CATTAATAGCTGAAGAGGGTTAAGTATAGATCTCAGAGACCAAATAACTGCT----TGGTTGTGTAGTTTCTC----ACTCTT------CAGTTTCTTTAAACATGTAAGC--AGTTTTAA------------------------------------------------------------AATTTAATAGC---------TGAAAATC----TCTTTAGTAT----TACACGTATATA-------------------TGATTATTAA---ATACACACAAACAC--AAGTGTAAAAACACAAGCATTTGACAAG----GTGCACTTATTTTTTAAATTCAGCTAAAAGT-------ATTCCTTTTGGACTTAGGAAAACTGGCT---TAGAAAAATGATCAGAACCTGAATTTTAACAGAGAAAGGGGGCACTCAGAGA--ATTTTGAATACATAAAGCAAATCCCTATTCTTTATATGAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATA---AATCCAACAAGGATACTTTGACCCATATTTTAAAACTGCTAGGTAAAAATGACCAGTCTCTCTTATGAGTCTAGTAAAAGTTA--------AAATGCACTGCCCAGCTTCTAACTACCCAATTAGTAGAGAGTTTACATTACTGAAAGTTCAAAACAGCTTCAGTGTTAAATATTTGTAAATCTATTCAAGACCCTGAACAAACTGCAAATTTGGTTATTAGCAAAATGATAATGTATCGCCCACCAAAATGAAATCTGCAATTCATTTTGATAAACTGAAAATGTTTTGAAATGTCACAGCAGCAAATATATTAAAGTTACACTGAGGTTTTTCAATAGTAGGAGTGTGTCACAATCCTTAAA---ATTTAAAGTAGTCATAACATCAACTAACCAGCACATTTAAACCAAA-------------ATTATCATTCTCAAGCTTTTTCTGTGCACATTATAAACATGCTCTAAGTTGCATTCCAACTTTCTTTTCTAACCTTACACATTAGCTTATTTTTCAAATGAAAAACAAAACTAAATTATTTTAATAATTAAATTTAAATTATTTTTTGTTCTTA-GTACTCCATCTTATT--ATATTAAAGGGTTCTATAGCTGCTGGGGTTAACTATGTGTCAGTTTTTTTAAAGTATATACCTTATAAACCCCAACTTCTTGCTAAATCAACTA-----------TTAAATGATAAATATTAAATTTCATT-------ATACATATCCTT------TAAGGTTTTCTTTTCTATTCCTGGTGGATG---------CACTTGAGTGCATTTTGTATTTCATAGAATGCACTGTCGTGTACTAATACTGTATATATTAATTTTTCTTAGTATGGAGATAGCTATTTAAA------CTTTGATTGGTT--GCTTGACATACATACAA-------CAAGTGTT-----AAGTCTGTTGTATAGAATGTTTATAAACTATGAATATCATATTTCCATTATAAGATGGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAA----TGTTTCACTTGACAATTACTCGTTTTCCCACAACG-CTTTATGCTATTGACTACTAAAGAAAACCTGAATCTTTTTCACCTATTTATACAAGGATTA-----AATACAAACTATCAGAATTAAGTAAGCAACTATATAATTCTGTCCACAGTGAAAACCCTGAATAAAACTTTTTTTCAAAAGGCATGTAAGTGGTTTTTGAACTGTAAAATTTCATGTCTCCTGTCAGAGTGAGCATTTGTAATTCCCAC-----GTGTGTATATAGACACACAAATACACACCTGTGCACATACACACACACGCAAACACACACACACACACACACTCACAAACATTTTCCTAACAAGTAATCTACACAGGCTTGCTGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATCGTAGTTTCTTCTTCGGAGGAGTCTTCAGTGTTCCAGATCTTTCTTTTACCTTGTATTCTAAAGTGCTGTGAGGTACCCCATAAATTCCTTGTGCTTTGGAAACACTCATTTTTCCGCTCATTACCATTGCAATAGCTTCTTCCATTATTTCATGATCATATTGCCGATAGCGGCCACGTTTTTTCCTGGGCTGCTTACTGTCTTTTCGATCTAATCCATCTTCAGTATTTTCAGAGGTTCCATCAACTGTTCCATTTTTAGAATTAAGACACAAAGGAGAGAGGTCCCCATGTAGAAAGTAAGAGTCAACACTTGAGTGAGTTACAGGCCCAGAACATTCTATTTTGTTCTGTTTAGGGAGTATATTTTTCAGTTTTTGGAGAGCTGATCCTTCTAGGACTGAAGAGGTTTTGGAAACTTGATACATAACATCCAACAGACCAGAACCATCAGGTTGTGATTTTGAGACAGAACTTACTCGTAGCTGAGGAATTTTTAACTGTACAGTAGGATTTGAAGTTTCATATTGGAGGCTTTCATTTTTTTCTTTAAACTGAGTGACCATTTTCTGTAGAGTTAGCTGATGGAGGTAAGTGGAAGCTGTTGGGAATTTTATTTCTGAGGTTTCAAGTAGATTGAGTTTACTTTTTTCTGTGCGCTCTGCTTGAGCTCTTGCCCACAAGGCTACTTTTTGCAGCACTGCACAAGTTTCTTTACTGTCCTTATATGAATAACTATCATGGAAATCTCGAGTTTTGTTTTTAAAAGATGCAGGCTTCCCTGCTGGTAAGGCTTCTAAGTGAAGAAGTAAAGTTTTTTGAGGTATGCCATAAAGTATGCCTGCTTTATTTATGTCCAGTGCTCCAGACTGAATGTCTTTCAAAGCTTTTGAGAGCAAACCATCTGCAAACTCAGCACTTCTTTCCACATAGTCCTCTCTGTTTCTGTGTAGTCTCCTGGATGGATGGAATGAAACGATGGTAAACTGATGCATGAGAGACTCTCACACAGCTATGGAAGGGGAGGGTCCACTCCTTTATTATACTCCTTGCTTAGGTAACATCACTGCTTATGACACTTTTAAGTCTGTGAGATGTAGTAGTT-ACTCCTTATCAAAGC-AAACGCTACAGTCCTGGTAGGACAATG---TGACAATGATACGGTGGCCTCAACGGGCAGACCTTCCAAGAACATAAAATCCTAACTCAGTATTTGTAAAAATATTCTCATGATGTTGC--TATTCCTCTGAT-AGATGCTTGCAGAGCAACAC--TTATAAATT---TTATTTATACAATTAGAGCTCCATTATAAAAAGTACCCAAATCCTAAAGGAGTTTTTGTTAGTACAAACGTGACGTTACCGCTAAACAAGTAATAAAAGAGTCAACCCCTTTAAAGGAAATTTGTAGCAGCAGGAATATTTCCAAACACAAACATCCCATATTTCCACAAGACTAATTTTTCTCTAGACAAGAGCTTAAAACTTGA-------AACAAGTAGATGTTATATTTGAATAATTTAA-----TTTTAGATATTATAAATGTCACTATTT----CAAATTA-----TCATTGTAATTTTCAAAGTTTCTCA-------------AACAGAAAGC-TTACTATACCTTACGACTCAAATACTACTA---CAGCCGTAGTTGAAACAAATTACAATCTACCTCTAAGATTTAAATGTGACAAAAAAGCTTCCTATGCAGTTAGTTAATGGGAAGATGCAAAAAAGTTGTAAAAAAAAATCCAAAAATCCAACAGAACA--GCATTTCACTACTAATTATTTATTTAATGATTAATGACACTTTTCAAAACATGAGAGGACTTTTTGTGGTGATTACTAGATATATTTAAGTAGTTTGCCACCACATCTAA-----AGTGCAATAA-AAAAATCTAAACACTATAA------------------ACTAGCATTA----------ATTAGTAAGT-------ACAGTGCTTTTGGAATTTGTTCA--TTGTTTTAAAAAATTAATAAAT-TACATATTTCCCTT--------------AAAATTGCG---TCCTGAGT------------ATTTAATTTA-ATATTCTCTTACTCGTCCTGCTTCTTAGTTTGTATT----CTATAAGTTGGTAGTTCA-TTTTAGTAACATGAACTAAAGTTTGGTGATTGTTCTGATAACTTTTCTTTAACAGAAAGAATAAAAAAGAAAGAGAAAGGACAAATGAAAGGTATG--------AGAGAGAGACACTTATGAGTGACAAAAA---TTCTGGAGGAAAACTATATAC-----------GTCAATACTACTCAGAATAGTAT---TAAGAGTTCT--CTGCAGAGATAATTTTATATTAATATTAAATTATATT------------------------TCCTAGATATTGCTTACCCAGCCACTGAATTTTCAGAA---GAAGGATCACATATGGATGACTCTTCAGATTTTATGCTGGTTTTCTTTGTAGAGAGATCTAACACTCCATCCCCTATAA chr4 - 94230402 15488521 15488520 15494304 78736099 78736098 78741882 5784 AGTAAGTCAAATGAGTCAGCGTA--CAGGtttttcatttctttttcttttttttctttttttcttttttttttttttACTGAATGAGCAAATCAATCACACATCA---GTGTTGTAAATTTATGTGCAAAAGCATTGAAGTGCTTTACTACAAATTACAACGTAGAAACACGTTAACTAAACAATTAAA-TTCATACAATTAGATTTAGGAATATAACAACACAAAGAAGAAACAGAATTACAGTACATTTACAACACAAGACAAATACATGGAATTCATTAGAAAATATTGTAATAAATAATTCATGAATTATAGTGCAATTGATTTATGCATAAATATAACTAATTGCCTAAAAATCAGTT---GTTAACAAAAATCTGTCAAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACAATGGAAATACTGCAATTAAAAAACAAATACAAGTATTTGTACTGTAAACAACTAAAAAA-TCAGTCTCACTAAAGTTAATATACAATTTAATATAAAATTGTCATTAGCTACCAGAAATGGTTTAAACAGCTTTACTGAGCAGTAGTT--CTAAAAACAGAGGCACTGTTTT---------------------TTAATATAAAATACTTGAGAAACATTCAAATAAGTAGAAAGCACGTAGGGCTTGCTTTCGCCTTCATTTAAAATTCTGCTGAAACACGGATTTTCAGAAG-TTGTCAATTACTAAGTAGTGACTGATAACAGAATTTATAAAACAGTTCAAAGTGTGTAATTTAAGTGACAT-TTAGTGGGGTCAAAGGGGTTGGGGAAGGAGAATCTACACATTTCCCTGCCTTTCCTTAGTTGTGTAATCAAAGGTTAGCCTAATAATTAGAAACAAATAATTCTGTTCCTTTAAACACTTACAGGTTGAGTATCATCTATAAACTATCAAAAAATATTTTAATATACTATTTCTGACCAAAAAATAA--ATACAAGTACTAAAATGTTGAAAATTAATTATAATATTACATACAAAACTACTGAGTACTGTTAAGTCAATAGTAAAATGATCCCTGATTTTATGAATCCTGTTATATTTTTGGTCAGGTCATCTTCTAAACGATATAAAAAGAGTACTGTAAGTTGCC-TTCAATATAAACTTCGGACTCAAATTTATAATGTT------GTCTGAGGAGTAGAAAACATCAGTACGGTACAAATGTTAGGCAATGTATCGAAA--CCCCAAAGTTATGCAAGTAAAAC---------AGAA--------------CTTGAACGTTTAACGTTTTTTTCAACTTCACTTTCCAGTGGGG----------ATGCATTAA-CAATTTAATTCTTCTGGCCCTCACAAAATATGGCTTAATTCTTTTAAAATGAAAGATGACCCTGACACCTGCTGTTTTTTGACCTTGTTATCAGGTACAGTTCTGCTT----------------AAAAAAGGATTCATTTTGAAATATGCAAGTAAACCTTAACCACTGAAGA---TTCAGTATAGATCTGAGAGACCAAAAAAGTGATACACTGTTTGTGCAGTTTCACTTAAATTCTTACAGATTACTCTATTTTAAAGTGTAAGCTTATTTTTCAGTAAGGTTAATAAATATGGACTAGATTTTGCCACTAATATTGCAAGTATGCTCTCCAGTGACTTTAATGGCAAATTCATTTAAAAATCAAGCTACCTGATGTAGCCCATACGTATCTAATGTCCCCTTTCTTTTTTTTAATAATTAACCTATGCATATGAAAATTTAAGTGCGAAAGAAAAAAC---TGACAATATATGTACGCGTGTGCCCCAGATGTA--TAAAAGTTGGAGAAAGTCTTTTTCTATCCC---AAATTGGATGCATACAGACATAATTA-------CATTTTAA--GAGGAAAAGGGCATTTATGTTCTGTATTGAATACATGAAG----TCTCTGCTCTTCATACGCAGACACACACTTTGTGATAGT---CCATGAAAAAATTAAGCTTGATATAAAGTCCAGTGTGAATACTTTGAAATCCATTTAAAAACTGTAATATGAAAGTAATTGGTCTCCCTTAT-AGTCTATTAAAAGTTACGTATTTAAAGTGAACTGCCTAACTTCTAACTACCAAATTTATAAAGAATTTATATTATTGAAAGTTTAAAACAGCTTCACTGTTTAATATTTGTATTTCTAT-CAAGACCCTGAAC----TGCAAATTTGGTTATTAGCAAAATGATAATGTA-----------------ACTTGGTATTCATTTTGATAAACTGAAAATGTTTTGAAATGTCACAGCAGCAAATACATTACAGTTACAGTGAGGTTTTTCA---GTAGGAGTGTGACACAATCCTTAAATAAATTTTAAGTAGTCATAACATCAACTAACCAGCACGTTTAAACAAAACAAACCAAAACAAAAAACCATTCTCAAGCTCATTCTGTGCACATTATGAACATGCTCTAAGTTGCATTTCAACTCTCTTGA--AACCTTATACGTCACCTTATTTTTCAAATTAAAAAGGAAA-------ATTATGATAAGGA---TTAAATTATGTTATGCTCTTAAGTATTCCATCTTATTTCATATTTAATAGTTCTATAACTACAGTAATT-------TCTCGGGTTTCATAA-GTGTACACTTTGTAAACACCAATTTCTTTCTAAACCACCAACAAAATTTTCTTAAAATGATAAAAAATGCAGTTTATGCCTGCTAACACACATTTTTAGTAATGAAATATCTCCTTCTTACTTGTATTGGATATTTAAGTAACGATTAACTTTTCTTTTTCTTTCACAGAATGTACTATATCCTACTAATACTTCACAAATTCACTT--CCTGGTAAGGAGCTAGCTTTTTAAAAAAATCCCTTGATTTGTATAATCTGAGTTACTTACAATTTATTGCAAGTATTCTGTGAAGTTTGT--------AAGTTTGCTAACCATAGATTGTGTATTTCTGTAATAAGATGGTCCG-TTGAATGGGTAGAGTGATTCTTCATCAATTAAAAATTATGCTTCACATGACAAATACTCGTTCTCCCAAAACATCTTTATGCTATTGACTACTAAATAAAACCTGAATCTTTT-CACCTATTTATACGAGGATTATATTAAATACACACTATCAGAATTAAGTGAGGAACTCTATAATTCTGTCCACAGTGAAAACCCTGAATAAAACTATTTTTCAAAAGGCATGTATGTGGTTTTTGAACTGTATCATTTCACGTCTCCTGTCAGAGTGAACATATGTATTTCTCACACTGTGTGTGTATacagacataca------------------tacacacacacacacacacacacacacacacaca-----AAACAATTTGCTAACAATTATTCTACACAGGCTTGCTACTAGTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTAAATAAGCCAGTGTCTGGTAAACGGAGTTTCTTCTTCGGCGGAGTCTTCAGTGTTCCAGATCTTTCTTTTACTTTATATTCTAAAGTGCTGTGAGGTACCCCATAAATTCCTTGTGCTTTGGAAACACTCATTTTCCCACTCATTACCATTGCAATTGCTTCTTCCATTATTTCATGATCATATTGCCGATAGCGGCCACGTTTTTTTCTTGGCTGCTTATTATCTTTACGATCCAAACTATCTTCTGTATTTTCTGAGGTTCCATCTACCGTCCCATTCTTAGCATTAAGACACAAAGGAGAGAGGTCCCCATGCAGAAAGTAGGAATCAACACTTGAGTGAGTTACAGGTCCAGAACATTCAATTTTGTTCTGTTTAGGGAGTATATTTTTCAATTTTTGAAGAGCTGATCCTTCTAAGACTGAGGAGGTTTTAGAAACGTGGTACATAACATCCAGAAGACCAGCAGTATCAGACTGTGGTTTGGACACAGAACTTATTCTTAGCTGAGGAATTTTTAATTGTACAGTAGGATTCGTAGTTTCATACTGGAGATTTTCACTTTTTTCTTTAAATTGTGTGACCATTCTCTGCAGAGTTAATTGGTGGAGGTAACTGGAAGCTGTTGGGAATTTTAATTCTGAGGTTTCAAGTAGACTGAGTTTACTTTTTTCTGTGCGCTCTGCTTGAGCTCTTGCCCACAAGGCTACTTTTTGTAGGACTGCACAAGTTTCTTTACTGTCTTTAAATGAATAACTATCATTGAAATCTCGAGTTTTGTTTTTAAAAGGTGCAGGCTTTCCTGCTGGTAAGGCTTCTAAGTGGAGAAGTAAAGTTTTTTGAGGTATGCCATAAAGTATGCCTGCTTTATTTATGTCCAGTGCTCCAGACTGAATGTCTTTCAAAGCTTTTGAGAGCAAACCATCTGCAAACTCAGCACTTCTTTCCACATAGTCCTCTCTGTGTCTGTGTAGTCTCCTGGATGGATGGAATGAAACGATGGTAAACTGATGTATGAGAGACTCTCACACAGCTATGGAAGGGAAGGGTCCACTCCTTTATTATACTCCTTGCTTCGGTAACATCACTGCTTCTGATACTTTTAAGCCTTTGAGATGTGGTAGTTAAATGATTATCCTAGCAAAATGTTACAGTTCTGGTAGGACAGTGCATCGAAAATCATACCGTGGCTTCTAC-AGCAGCCCTTCCAAGAACTTTATATCCTATCTCAGTATTTG--GTAATATTCTCATGTGCTTGCTATATTCCCTTGTTCACATGCTTGCAGAGCAACACTGttataattttaattatatataCAATTAACGTTCCATT-----AAATACCCAAATCCTGAAGGAGTTTTTGTTAGTAGAAACGTGACGTTACCGCTAAACAAGTAATAAAAGAGTCAACCCCCTCATAGAAAATTTGCAGCAATAAGTACATAACTACACACAAACATCCCAGACTTTCACAA-ACTAGGCTTTCTACAACCATAAGGTAAAG---TGACATAGTTAACAATCAAGT-CCATTTTGGCAAAATGAAACACAGTTTTAAAAACTTCTA--GCCACTACTTACAGCTAATTACAAAGTCATATCAATTTTTAAAACTTCTTCGTATCAACAAATTAATAAAATGCATTTTTACACCATCCAA--CAAGTACTGCTATTGTATTCCTATTTGTAATAAGTTAC------TTTGTAAGACGTACAGGTGACAAAAAGGGTCCTGCTATGGCTAGTGGATGGGAGGATGCCAAAA--TTATAA----------CAAAATCCAACAAAACAATGCATTTCTCTA-----------------GATCTGTGGTAGCTTGCAGCA---GAGGCAACATTTT-TCTTGCTGGATAAAGAAATTTAACTA-TTTGCCACCACACACCATAGCCAGAACCATGATGTAAGTATAAGTATGATGATTAAGAGCTCTCTCTCTCACGCGCATTCTCTTGCTCATATTAAGGAGTATTATAAATAATAGTCATTTAACTTGTTCATGTTAGTTGAAGAATATTTTAGATCTAAATATTAACTTTTTTTTTTGGTGTCAAAAACTGCAGTTTCCTAAGTGAACTCTGAAAGAATAAATTTGCATTCTCTTCTACT-GTCCTACTACTTTCATTGTGTCTACATAATCAATTTTCAGTTCATTTTTAGTAACATGAACTAAAGTTTGGTGATTGTTCTGATAACTTTTCTTTA--------AACAGAAAA-AAATAAAAAGGACAAATGAAACATATGATATATACATAGACACACACTTATGAGTGACACAAATTCTTCTGAAAGCAAAATATAAACCACGCGTGTGTGTCAGTATATACTAATATGTTATGAACAAAAAACCTGACTTCAGAGA---------AGTAAGAGAAAACTCGATTTTCTTTTACATAAGCCGAAGAGAGTCCTAAAAGCTGCTTACCCAGACACCGAGTTTTCAGAACACAAGGGATCGTATTT---TGGCTCTTCCAACCTTGCGC---TTTTCTTTGTAGAGAGATCTAGCACTCCATCCCCTGCAA .....:.....::......:...--...-------------------............:..:.:.......:..............:..............:..---..............x......................................x................:..........-..........:........:x................x..:.................................:.......-.................................................................................x........---:.........-..........-......................................x..........................................................-..................:..................................................:..................--......................---------------------...................:........................:..:..x........:........---..x...........:x.:x.........:-..........x...:....:....:....x:....:.....::.x..::..:-..x...:x...:x.x...-...:.:.::...xx....----:.....:....--------...............x:x....:........x....:.::......-.....::-----..:....:....x..x.x...::......x...:.:...........................x...................xx..--.................:..x.......:...........x..:...........x......x..........:.................-...........x.x:...................:....:....:....-.x..x.........x..-..:.x..........xx.x....x..xx......x------..x......:..:....xx...:...::..:....:...x.:....:..:x...--..........x.x.........:---------...:--------------:.....xxx.xx..x..x::..:.....::.......x.....----------..::.:...-:...x:..x.--................................x....-.................:........:.x.:.:..----..:.x...:.x..:--...----------------....:.........x::xx.:.:....:....-.x....:x:.......---..x...........x..........x..x..x.----..x.....:......x.----.:....------:.x.:.x...x..x:.......--.x....x.------------------------------------------------------------.x......:..---------.:......----.x::.::.:.----:.:......x..-------------------.:..x.....---..:..:.::..x.:--.....::...:x.x..:.---......x----..:.:.x.:.x::::.:..x:.--.......-------.x..:....xx.:::x---...:...x.---..x.:.x..:..:.-------x.......--...:..::.....:.:.x:xx--:.x..........:...----..:..::....:...:.x..:..:.::....:.:.:.x.---...:x.x.:xxx:.x:..:x...---.:....:::x.:.........xx:x:....x.......:x.x:.:...:.:.:::.....:.....-......x.........--------..:..x......:.:............x....x:..:...:....:....:........:............x....x..........xx.....-.............----.................................-----------------.::..xx.................................................:....x.......x............---...........x.............---....x.............................:.......x...-------------.xx.:............:x...............:....................:.....:....xx--.......:..:.:.x..............x.....x:...-------...x.:....xx.---.........x..x..:.....-...:...........--.....x..x:........:..:.x.x::..-------.x..:.x...:x...-..:..:..:..:.....x....:.....x.....:..x.x.-----------.x..........x.x.:x.x..:..x-------.:...:..::..------x..:xx.:..:..::..:.:x.:x.....:---------.:x..:.x.x:x:...x.x.....:......:...:.xx:x..........x:.:.x...x.:..--.:.:...x....x.....x......------.:......x..x--:::...xx...x.....-------.....:..-----....:...--------.x....::x...:..::..xx::......::.x..........:.:-:.......x.:..:..:.::....:....x....----..:.....x......x........:.....x...:-......................x................-.............:.......-----......x................:..x....x.....................................x..................x.................xx......:.................:...x....x...:...-----.........:.....:...------------------...........:..x...................-----.....x...x.......x..x................:..:x...................................x....x..............x..x..............x................................:..:...........................................................:..:.................x..................................................:..x.........:.:.....x.....:..x.:......x........x...........x..:..:.....:....x..............................:........:..:.......................:...........x...............................:......:................:......:........:.....x..:.............:x.......x.x:.....::....:...x..x..........:..x..................:..............:.x.........:.....::.....:.............:..x.........:....:.......::..:.........x.....................x...................:..........................................................:..x.......................:...x...............x..........................:.........:.......................:...........................................................................................................................................x................................................:..............................:...............................x................x...:.........:..x........:......-.x.xx.....xx...-...:.:......:...........:..---:..x...x....x.....:..x..-:....x............x.x.x......x...........--:x............xxx....--......::..x.-.x..................--......x..---....x..........:x.:......-----..:............:..................x............................................:.:.x..:.......:....::.:.x.:..xx.:.x..............x.:..:.....-....:x:.....x:.:x..x:..x.x..:---...-------.....x:.::.-::..x..x.x.x...xx..-----.....:.x.:.x:x.--.:.....:..----.x.....-----....xx:......:...::....:x-------------..:.:..x..-..x:..:...x.x.:.--...:....:...---:.x:.x..x...x..:..:....------::.x.....:x..x.x..........:.x.:.:xx.:::.:....x:......:.....x....--..:...----------x...........:....--.......x...-----------------...:x:..::.x:..x..:x.---...:x:..x....-.xx..x.x:x..:.x.x......x..-............:x:x.-----..x:.x..:.-:x..:.x...::.:x..:.------------------..xx.....x----------....:x:...-------.:.:.:x.:x.xx..:.......--..:x..x..:..xx.xx..:..-..x.....xx.:..--------------....:...:---....:...------------.x.x.....:-..x:...::....-.....:..x...xxx....:.:----:x..x.:..xx:......-...................................................--------..:.:....-...x.:...............x:....--------.x...x.x................x...---.....:.:.x...x....x..-----------....:..:xxx::.:x..:x...---:..:.:x:..--..x......---------.x...x.xx...:.xx...------------------------.....:.x::...........x...:..:.........---:.:.....::..x.---..:......x:.::..::..---.....................:.............::.. 23M2D3M19I58M3D81M1D82M1I90M3D10M1I10M1I97M1D88M2D22M21D68M3I29M1D52M1I18M1D18M4I11M8I46M1I7M5I87M2D91M1I49M1I17M1D35M6D54M2D23M9D4M14D43M10D9M1D10M2I37M1I35M4I14M2I3M16D32M1I16M3D33M4I17M4I6M6I22M2I8M60I11M9I8M4I10M4I12M19I10M3I14M2I18M3D7M4I22M2D7M7I16M3D9M3I14M7D8M2D21M2I17M4D39M3D23M3I66M1D16M8I95M1D13M4D33M17D82M3D25M3I46M13I68M2D40M7D13M3D21M1I15M2I30M7D15M1D41M11I26M7I12M6I30M9I65M2D25M6I12M2I17M7I8M5I8M8D46M1D34M4I35M1I39M1D21M5I149M5I19M18D34M5D1203M1I15M1I27M3I24M1D41M2D21M2I12M1I20M2I9M3I25M5D140M1D29M3D3M7I11M1D19M5I15M2D10M4I7M5I25M13I10M1I16M2D12M3I23M6D64M2D6M10D17M2I11M17D21M3D13M1D26M1D17M5I10M1I19M18I10M10I10M7I23M2I22M1I14M14I9M3I8M12I10M1I13M1D22M4I18M1I51M8D9M1D27M8I28M3I21M11I23M3I10M2I9M9D19M24I38M3I14M3D20M3D39M 4426/5311 83.3% 5784/94230402 0.0% 759/5311 14.3% 2392050 NA +9920 chr4 + 190214555 17908999 17908998 17909219 221 AAAATAAATTTCCCTATGAATATAAAAAGTTATAAATATACATTTAACGATATAAAACATCAAATTATATATTAAATGCACACAAAAAAT-CTTACCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGTGAGGTCTAAGGGGCCTTCCTGCTCTTCCTGAAGGGAGTTTTCTGCTTGATTCATTTGGATACTTTTACATACTATACTTGGTCCAATTG chr4 - 94230402 15549523 15549522 15549734 78680669 78680668 78680880 212 AAAAAACTTTTTATTTTTGAAGTAGAAAGATATAATAA-------GGTGGTAAATAACATGAAAATACCGATAAA---CAAATAAGAGATATTTACCTTGCTGAGTATTCTGTTCTTGAGTTCGATTCACAGTGAGGTCTAGAGGGCTATCCTGCTCTTCCTGAAGGGAGTTTTAAGGTTGGTTCATTTGGATACTTTTACATATCAGACTCGGTTCAAATG ....x.xx...:x:.x.x:.x:..:....x.....xx.-------:::.:..x.x.....x...x..:xx..x..---..x.:..:.:..-:.................:........x:.....................::....:x.........................xx.x...:......................::.x...:...:...x.. 38M7D30M3D12M1I131M 162/211 76.8% 212/94230402 0.0% 11/211 5.2% 2359476 NA +21726 chr4 + 190214555 17908999 17908998 17909394 396 AAAATAAATTTCCCTATGAATATAAAAAGTTATAAATATACATTTAACGATATAAAACATCAAATTATATATTAAATGCACACAAAAAAT-CTTACCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGTGAGGTCTAAGGGGCCTTCCTGCTCTTCCTGAAGGGAGTTTTCTGCTTGATTCATTTGGATACTTTTACATACTATACTTGGTCCAATTGA---ACCATTTCTATTCTCTTGAGTTTTACCACTTTTTGAAATGTACTCAATCGCAAATTGACGTATCATCTTTTTCATTAATTCCTGAGCAACTAGGGGAATGTTAGGATCACAGTTCTGAGGAAGATCTAGGGAAGAAATAAATA-------TAATAATCATTTTAAAAAGAGAAAGGCAAAT chr4 - 94230402 15505197 15505196 15505593 78724810 78724809 78725206 397 AAAAAACTTTTTATTTTTGAAGTAGAAAGATATAATAA-------GGTGGTAAATAACATGAAAATACCGATAAA---CAAATAAGAGATATTTACCTTGCTGAGTATTCTGTTCTTGAGTTCGATTCACAGTGAGGTCTAGAGGGCTATCCTGCTCTTCCTGAAGGGAGTTTTCCGTTTGGTTCATTTGGATACTTTTACATATCAGACTCGGTTCAAATGATGAACCATTTCTGTTCTCTTGAATTTTGCTACTTTTTGAAATGTACTCAATTGCAAACTGGCGGATCATTTTTTTCATTAATTCCTGAGCAACTAGGGGAATGTTAGGATCACAGTTCTGAGGAAGATCTAGGAGAGAAAAGAACAACAACACAAGCAATAGATGTATTAAGAAAAATGCAAAT ....x.xx...:x:.x.x:.x:..:....x.....xx.-------:::.:..x.x.....x...x..:xx..x..---..x.:..:.:..-:.................:........x:.....................::....:x..........................:.:...:......................::.x...:...:...x...---.........:.........:....:.:.....................:.....:..:..x.....:...............................................................::.....x:..:.-------x.::...x:x.x..xx....:...x...... 38M7D30M3D12M1I132M3I143M7I31M 313/386 81.1% 397/94230402 0.0% 21/386 5.4% 2403802 NA +3145 chr4 + 190214555 17939823 17939822 17939900 78 GGAGAGGGGATGAAATCTGGAAA-------AAAATAAACCTGGGGAAAAGGAATAGGTACATGTACACACACACACACATATATG chr4 - 94230402 31590311 31590310 31590395 62640008 62640007 62640092 85 GGAAATAAAAAGAAACTTGAAAGCTCTTTGAAAACAAAACTGAAAAAAGACAGCACGTGCACGCACACACACACACACGTATATG ...:.x:::.x....::..:..:-------....:...x...:::...::x.::.x..:..:.:..............:...... 23M7I55M 53/78 67.9% 85/94230402 0.0% 7/78 9.0% -13650488 -80579914 +3025 chr4 + 190214555 17940117 17940116 17940200 84 TATATATATATGTATATGTGTATATATATGTATATATGTATATATATGTATACATGTATATATATATATATACACACACACACA chr4 - 94230402 35554958 35554957 35555041 58675362 58675361 58675445 84 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x......x..x:.:.....::.:.....x:.:...:.....::..::.x.x....:..x.x..x:.x:.x..x.:...x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -17614841 -76615561 +3946 chr4 + 190214555 17940132 17940131 17940214 83 ATGTGTATATATATGTATATATGTATATATATGTATACATGTATATATATATATATACACACACACACATATACAGGTAGATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......:...:.:..:...x.::.:...x..::...::...:x..:..xx...:.:.............x.:...::.::... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 9544344 NA +3166 chr4 + 190214555 17940135 17940134 17940206 72 TGTATATATATGTATATATGTATATATATGTATACATGTATATATATATATATACACACACACACATATACA chr4 - 94230402 54293155 54293154 54293226 39937177 39937176 39937248 72 TGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATA ..:.:..x...............:.:....xxx::.....x.xxx:..:.:.:x...::...........:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -36353020 -57877382 +12704 chr4 + 190214555 17961764 17961763 17962049 286 ATATAAAG-AAAAATTAAGAATAAAGAAACAATAAAGAGTGAAGTAGAGAGACTGACATATAAAAAACTTTTGTGTAAAAAAATTCCAAC----ATTTTACATCTCTATTG----CAAATT-----TTAAATGACAAAGCATACCAATATTACCTTTCTTTCGAAAGAGTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTTGGTGTTGACTGTGAAGAATCAAGAGATGGTATACAATCCT-AAAAGTATAAGAAAA chr4 - 94230402 15554037 15554036 15554335 78676068 78676067 78676366 299 ATATAAAGTAAAGACTGGGGAAAAATAAACAACAAAGAG--AAACAGTGCTCAGTACATTAATAAAAGTACTTTAGAATAAAAGTCAAACGTAAATTATTCAATTCTTCTAGATTCAAGTTATCTCTTAATAGAAAAGACATGCTTTCATTACCTTTCTTTCGAAAGAGTGCATTTAGATAGTTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGAAAGTTCCTCTGTAGGTGTTGACTGTGAAGAACCAATAACTGACGCACGATCCTGGAAGGCATATGAAAA ........-...:.:.::.:.x...x......:......--..::..x.xxxxxx....xx.x....x.x:.x.:x..x....x..x...----...x.x..x:...x:.:----...:..-----....xx..x..::...:.:xx:..............................:..:..................................................x..:........x..................:...x.:x..::::..:.....-:..:.:...x..... 8M1I30M2D49M4I17M4I6M5I159M1I15M 219/284 77.1% 299/94230402 0.0% 17/284 6.0% 2407727 NA +12803 chr4 + 190214555 17961764 17961763 17962114 351 ATATAAAGAAAA-ATTAAGAATAAAGAAACAATAAAGAGTGAAGTAGAGAGACTGACATATAAAAAACTTTTGTGTAAAAAAATTCCAAC-------ATTTTACATCTCTAT-TGCAAATT-----TTAAATGACAAAGCATACCAATATTACCTTTCTTTCGAAAGAGTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTTGGTGTTGACTGTGAAGAATCAAGAGATGGTATACAATCCT-AAAAGTATAAGAAAACAACAA---CATACAGAA--TTATTTTTTAAT--TCAAACATGGAATTCCATTA---------AAAATGACAAAAAATTAA chr4 - 94230402 15510505 15510504 15510884 78719519 78719518 78719898 380 ATATAAAGGAAAGACTGGGGAAAAATAAACAACAAAGAG--AAACAGTGCTCAGTACATTAATAAAAGTACTTTAGAATAAAAGTCAAACGTAAATTATTCAATTTTTCTAGATTCAAGTTATCTCTTAATAGAAAAGACATGCTTTCATTACCTTTCTTTCGAAAGAGTGCATTTAGATAGTTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGAAAGTTCCTCTGTAGGTGTTGACTGTGAAGAACCAATAACTGACGCACGATCCTGGAAGGCATATGAAAATTATCAAGTCTTTCAGAAGTTGGTCTACTGATAGTACAACATGTAATTAAGTTACTGAGCTATAAAATAACAAACCACTAA ........:...-.:.::.:.x...x......:......--..::..x.xxxxxx....xx.x....x.x:.x.:x..x....x..x...-------...:x.:x.:....x-.x...:..-----....xx..x..::...:.:xx:..............................:..:..................................................x..:........x..................:...x.:x..::::..:.....-:..:.:...x.....:x.:x.---.x.x.....--.x:.:.x:.:..--.xx......x....xx:...---------.....:.....xx.:... 12M1I26M2D49M7I15M1I8M5I159M1I21M3I9M2I12M2I20M9I18M 262/349 75.1% 380/94230402 0.0% 33/349 9.5% 2451259 NA +8101 chr4 + 190214555 17962964 17962963 17963106 143 ACTTACACTGACTGCTTCTCTCTGTAGGTTACAAAATGAACATTTTTCATCCATAGACCAGTCAGTCAGCTCTTCTGGTTCACAGTCTTTAAAAGAGGGAAAAAATTCA------TTAAATATACTAACTTTATTAAAACAAATAAAAT chr4 - 94230402 15554553 15554552 15554701 78675702 78675701 78675850 149 ACTTACACTGACTGTTTCTTTGTGTAAATTACAAAAGGAACATTTCTCATCCATAGACCAGTCAGTTAGCTCTTCTGGCTCACAGTCTTAAAAGAAGGAAAAAAAGCTAGATGTTTTAAACATGTAAACATGGATTCAGAGAACAAAAT ..............:....:.x....::........x........:....................:...........:..........x...::...:......x::.------.....:..::x...x.x:x.xx.:x:..:..... 109M6I34M 113/143 79.0% 149/94230402 0.0% 6/143 4.2% 2408411 NA +8101 chr4 + 190214555 17962964 17962963 17963106 143 ACTTACACTGACTGCTTCTCTCTGTAGGTTACAAAATGAACATTTTTCATCCATAGACCAGTCAGTCAGCTCTTCTGGTTCACAGTCTTTAAAAGAGGGAAAAAATTCA------TTAAATATACTAACTTTATTAAAACAAATAAAAT chr4 - 94230402 15511019 15511018 15511167 78719236 78719235 78719384 149 ACTTACACTGACTGTTTCTTTGTGTAAATTACAAAAGGAACATTTCTCATCCATAGACCAGTCAGTTAGCTCTTCTGGCTCACAGTCTTAAAAGAAGGAAAAAAAGCTAGATGTTTTAAACATGTAAACATGGATTCAGAGAACAAAAT ..............:....:.x....::........x........:....................:...........:..........x...::...:......x::.------.....:..::x...x.x:x.xx.:x:..:..... 109M6I34M 113/143 79.0% 149/94230402 0.0% 6/143 4.2% 2451945 NA +7760 chr4 + 190214555 17972647 17972646 17973037 391 AAAAATATGGTATGTAATAAAAATATCTGGATTACTTTATTAATTTTAAAATATTTTCTAATTAAATTGGATCATAAATTCATGTTTAATATAAAGTTAGTATAGAACAACAATTTTTCATTTGTTAAATAGGATGGGAAATGACAACTTTTAAATAAAATTTTAAA--AATTACCTTCAAATAAACTGAGGTCTCTTCGTAGCCGTGGTCCATAAAGCCCTTCTAAAATACTCTCAAAACCTGT------GTTTTTAGA-----GAGAGAAAAGTATATT-------------AACTACTAGAAAAGTTACATTTTACAATTTAAAGTCATAAACTCTGTATCAATCAGCAAATTA----ATTTAACATACCATAAATATTT---TTCCTCTAGCTGCATTAAACTGAAGTAGGCAATATACA chr4 - 94230402 15562690 15562689 15563078 78667325 78667324 78667713 389 AAAAATACATTA-GAAAGAAAAATAACTGGAGT--TTTCCTGCtttt----ttttttttaattaaaaaaagaattaaataCATATTTGAGAGTACTTCTAGCTAAAAGAAAAACTT--------------------GCAAATACAGATCATTGAACTAAAAGTTGGGTTATTTACCTTCAAATAAACTGAGGTCTCTTCGTAGCCTTGGTCCATAAAGCCCTTCTAAAATACTTTCAAAACCTGGAAACAAACATTTAGAACAGTGAATCAAAGGTTTATTTTAAAAGGAAAGCAAATTTGAGAAAACTAGCATTAAATATTCTCAAATCCTGAGAGCAATTTCAA-----AAATTGTTACATTTATCAT---ATAAATATTCCTGCTGCTATAGGACCATTCAACAGAATTAGAAGATAAACA .......::x..-.x..x.......x.....x.--...x:.:x....----.x....:........xx:::xxx.....x...:...:.x.xx.xx.:x:xx..:..x..x..:..--------------------.x....:xx:.::x..:..:x...xx..:::--.x..................................x...........................:..........x------::x......-----..:xx...:..x....-------------..x.x:x......x.x:....xx.:.x.:.x..:..x.:.:xx.x:.x....-----.....:----.....x...---.........:---:.x..x...xxx....x...x...x...:x:...x... 12M1D20M2D12M4D65M20D31M2I76M6I9M5I16M13I52M5D6M4I9M3D10M3I38M 252/356 70.8% 389/94230402 0.0% 68/356 19.1% 2409957 NA +7274 chr4 + 190214555 17972647 17972646 17973037 391 AAAAATATGGTATGTAATAAAAATATCTGGA-TTACTTTATTAATTTTAAAATATTTTCTAATTAAATTGGATCATAAATTCATGTTTAATATAAAGTTAGTATAGAACAACAATTTTTCATTTGTTAAATAGGATGGGAAATGACAACTTTTAAATAAAATTTTAAA--AATTACCTTCAAATAAACTGAGGTCTCTTCGTAGCCGTGGTCCATAAAGCCCTTCTAAAATACTCTCAAAACCTGT------GTTTTTAGA-----GAGAGAAAAGTATATT-------------AACTACTAGAAAAGTTACATTTTACAATTTAAAGTCATAAACTCTGTATCAATCAGCAAATTA----ATTTAACATACCATAAATATTT---TTCCTCTAGCTGCATTAAACTGAAGTAGGCAATATACA chr4 - 94230402 15518823 15518822 15519213 78711190 78711189 78711580 391 AAAAATACATTA-GAAAGAAAAATAACTGGAGTTTTCCTGCtttttttaaaaaaa-----aattaaaaaaagaattaaatacatattttaGAGTACTTCTAGCTAAAAGAAAAACTT--------------------GCAAATACAGATCATTGAACTAAAAGTTGGGTCATTTACCTTCAAATAAACTGAGGTCTCTTCGTAGCCTTGGTCCATAAAGCCCTTCTAAAATACTTTCAAAACCTGGAAACAAACATTTAGAACAGTGAATCAAAGGTTTATTTTAAGAGGAAAGCAAATTTGAGAAAACTAGCATTAAATATTCTCAAATCCTGAGAGCAATTTCAA-----AAATTGTTACATTTATCAT---ATAAATATTCCTGCTGCTATAGGACCATTCAACAGAATTAGAAGATAAACA .......::x..-.x..x.......x.....-..x:::.::.xx........x.x-----.......xx:::xxx.....x...:...x.x.xx.xx.:x:xx..:..x..x..:..--------------------.x....:xx:.::x..:..:x...xx..:::--.x..................................x...........................:..........x------::x......-----..:xx...:..x....-------------..x.x:x......x.x:....xx.:.x.:.x..:..x.:.:xx.x:.x....-----.....:----.....x...---.........:---:.x..x...xxx....x...x...x...:x:...x... 12M1D18M1I23M5D57M20D31M2I76M6I9M5I16M13I52M5D6M4I9M3D10M3I38M 250/357 70.0% 391/94230402 0.0% 68/357 19.0% 2453824 NA +3159 chr4 + 190214555 17998965 17998964 17999016 52 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATATA chr4 - 94230402 70707582 70707581 70707633 23522770 23522769 23522821 52 AAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ....x.:.....x.::....::x.......................:.::.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -52708617 -41521785 +3191 chr4 + 190214555 17998965 17998964 17999014 50 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATA chr4 - 94230402 70707584 70707583 70707633 23522770 23522769 23522819 50 AACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..x.:.....x.::....::..................:.......::.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -52708619 -41521783 +3225 chr4 + 190214555 17998966 17998965 17999045 80 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACATATATATATATATATATATAGTATAG-TAAATACAT chr4 - 94230402 86485727 86485726 86485806 7744597 7744596 7744676 80 AAAAGAAGAAATAAGAAAAAATAC-TATTTTTATATACATACACACACCTATTTACCTACTCATAGTATAGATACACACAT ....:..:...x..:........:-...x.x......:.:.....:.:x...x..:x..:x:.........-..x.:.... 24M1D46M1I9M 59/79 74.7% 80/94230402 0.0% 2/79 2.5% -68486761 -25743641 +3088 chr4 + 190214555 18010389 18010388 18010426 38 TGTGTGTGTCTGTGTGTGTGTGTGTATATATATATGTA chr4 - 94230402 89821282 89821281 89821319 4409084 4409083 4409121 38 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTA ...........x.........:.:.............. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -71810893 -22419509 +3034 chr4 + 190214555 18010403 18010402 18010468 66 TGTGTGTGTGTATATATATATGTATGTATGTATATATGTATGTATGTGTGTATATATATATATTTG chr4 - 94230402 81401300 81401299 81401365 12829038 12829037 12829103 66 TGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATG .....x.....x..x.x....:..::..x.x:..:.....x..:..........x..:.x:..x.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -63390897 -30839505 +3374 chr4 + 190214555 18032964 18032963 18033010 47 CCCCACCCCCCAAAACAAACAAACAAACAAACAAACAAACAGAAAAA chr4 - 94230402 69241320 69241319 69241366 24989037 24989036 24989083 47 CCCCACCCCCCAAAAAAAACAAACAAACAAATAAATAAAAGAAAAGA ...............x...............:...:...x::...:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -51208356 -43022046 +3116 chr4 + 190214555 18071489 18071488 18071527 39 GAAAAACAAAACAAAACAAAAAAACCCGCATTGATGTGC chr4 - 94230402 69988160 69988159 69988198 24242205 24242204 24242243 39 GAAAAACAAAACAAAACAAAAAAACCCAACTTGATGTGC ...........................:xx......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -51916671 -42313731 +10728 chr4 + 190214555 18099898 18099897 18100104 207 AGAACTCAAATCTAACCCAAGCTCAAAGTTGTTAAATACTTTTAATTTTCATCTGTGTTTTGTG---TTGGAAAATAATTTTAATATTAAAG-GACAGCTGTAGACTGCTAATGACTTGAATACAGTTTGACTGTTTT-CATAAAGT-GCTCTGTGGGATGTCAGAATATTT--AATTCAGGATGTTAAAAACAT-CCCAAAAT-GTCACAATAATT chr4 - 94230402 15600119 15600118 15600334 78630069 78630068 78630284 216 AGAAGTGAAAACTGACAAAAGATGTAAGTTACTAAATACTTTCAATTTT-ACCTACATTTTTTTAATGTAAAAAATAGTTTTGATATTAAAATGACAACTGTAGACTCCTGTTGACTTGAATACAGTTTGACTGTTTTCCATGAAGTGGCTCTGTGGGATGTCAGAATATTTTAAATTCAGGATGTTAAAAACATCCCCAACATGGTCACAATAATT ....x.x...x..:..xx...x.xx.....::..........:......-.:..:::....x.x---x.::......:....:........:-....:.........x..:x..........................-...:....-........................--.....................-.....x..-............ 49M1D14M3I25M1I45M1I8M1I24M2I21M1I8M1I12M 176/206 85.4% 216/94230402 0.0% 11/206 5.3% 2499779 NA +3066 chr4 + 190214555 18109574 18109573 18109657 84 TAACCCTGCAAAGTTTATATTATCACTAAC--CCCTGTTTTGTAGATAAGAAAACTGAGGCTCAGAGAGGTACAGAAATTTGCCCA chr4 - 94230402 10729174 10729173 10729257 83501146 83501145 83501229 84 TACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ..x.....::.:..xx:..--..:....x.--.:.::....::..:.::............x..x.x....xx..x.......... 19M2D9M2I54M 59/82 72.0% 84/94230402 0.0% 4/82 4.9% 7380400 NA +3268 chr4 + 190214555 18111102 18111101 18111160 59 CTTCATTTTACAGGGGAGGAAACTGAGATAATAGAGGGTTAAGTAACTTGTCTAGAGTC chr4 - 94230402 10729204 10729203 10729262 83501141 83501140 83501199 59 CTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:...........x.:.:........::.xxx:x:..........:...:.:...... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 7381898 NA +5202 chr4 + 190214555 18111897 18111896 18112042 146 AGAAAGAAAATCAAAGCCGACAAGCACTGTGCTCATTAGGCAGACGTTCAGTTTTATCCAGTCATGAAGATATTAAGAAAAGATATTTATAGCTGACCTTTCAAGATTAATAATTTCAGTGAAAGAGAAACTGTGGTATTCAACAC chr4 - 94230402 15600915 15600914 15601054 78629349 78629348 78629488 140 AGAAAGAAAGTCTGGACAGACAAAGATTATACTCATTAT-----TACACAGCTCTTTTCAGTCACAAAGGCATTA-GAAAAGGTATTTATAGCTGACCTTTGAAGATTTATAATTCCTTTTGCTGGAGAAGTATAGAGTTTTACAC .........:..x:::.x.....:x.:.:.:.......x-----:::x...:.:.x.:......::...::....-......:..................x......x......:.xx.x:xx.:::..x.:.:.x:..:x.... 39M5D31M1D70M 96/140 68.6% 140/94230402 0.0% 6/140 4.3% 2510982 NA +3335 chr4 + 190214555 18145369 18145368 18145483 115 TCTTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTCTTCCTTCCTCCCTCCCTCCCTTTCTTCCACAAA chr4 - 94230402 61964780 61964779 61964885 32265518 32265517 32265623 106 TCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTC--TCCTTCC------CCGGGCTCCCCCCCTCACACTCCT-CACAAA ...:.x:.x:....:.....:...:...::.:...:.::..:..:.........x::x:x.x.x.x...--.......------..xxx.....:.....x.x:..:.-...... 69M2D7M6D24M1D6M 73/106 68.9% 106/94230402 0.0% 9/106 8.5% -43819411 -50410991 +3305 chr4 + 190214555 18145383 18145382 18145455 73 TTTCTTTCCTTCCTTCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTCTTCCT chr4 - 94230402 22629305 22629304 22629377 71601026 71601025 71601098 73 TTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT ........:..:...:.x.x...x.x:::x:::..:..:x...x..:x...:..x.................. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -4483922 -89746480 +9872 chr4 + 190214555 18172698 18172697 18173013 316 ACATTTGTATTAGAGATGC----TGTGGATAATATTATGTCAAAAAGTGCAGGATTCTAAATTGCTGAAACTCATCAGTTCACAGAAAACCGACATGCACTGCCATATTCCAGATGCTTGATTGTGGTTCTTTAATATAACGAGTTGCCAGTTCCTCTCTCTAGAGAACGATTGACAGATTGTAATGCAATCTGTTGATGTTCTTTGATGGTGATTCTCAG----------TCATTGCCACCACTACTAAGGAGCTTGGGAGTCTGACCACGGA-GCTTTGCTCTGGAAACTGTGTGTCAGTGTTGGGTGTTGCGGCAATTCCAATTGATA chr4 - 94230402 15644808 15644807 15645128 78585275 78585274 78585595 321 ACATGCTTATTACAGAGACCTCTTGTTGGCAAGttaatttttaaaaaatcattattataaattGTTTCAACCGGTCAGATCACATAAAATCTACTTGTACTGTAATATTCCAGATGCTTGATTACTGTTCTT-AGTGTAGCAAGTTGCCAATTTCTCCCTCCTGAGAATGTGTGACAGATTGTATTACAATCTGTTGATGCTCT-------TGATT-TCAGCTGAAGTACATCATCATCACTCATGCTAAAAAGCTGGGATGTAT-ACTATAAATGTATAATTTTGTGAAATGTATGATCATATTTTGTGTTTCAGCAATTTCAAACGGTA ....x:x.....x...x:.----...x.::..xx.x..x.:x....:xx..xx...x.......:.xx...:x:....x.....x....:.x..x..:....:x...................::x......-.:.:..:.:........:..:...:...:x.....:.xx............x.:.............:...-------.....-....----------....:::...:xx.:....::....x..:x..x.-..:.:::.-.:x.x::.:..x:..x...:..x:x:.:..xx.....x.:......:...x:.:.. 19M4I109M1D71M7D5M1D4M10I34M1D8M1I56M 213/306 69.6% 321/94230402 0.0% 25/306 8.2% 2527890 NA +9964 chr4 + 190214555 18172717 18172716 18173013 297 TGTGGATAATATTATGTCAAAAAGTGCAGGATTCTAAATTGCTGAAACTCATCAGTTCACAGAAAACCGACATGCACTGCCATATTCCAGATGCTTGATTGTGGTTCTTTAATATAACGAGTTGCCAGTTCCTCTCTCTAGAGAACGATTGACAGATTGTAATGCAATCTGTTGATGTTCTTTGATGGTGATTCTCAG----------TCATTGCCACCACTACTAAGGAGCTTGGGAGTCTGACCACGGA-GCTTTGCTCTGGAAACTGTGTGTCAGTGTTGGGTGTTGCGGCAATTCCAATTGATA chr4 - 94230402 15648577 15648576 15648874 78581529 78581528 78581826 298 TGTTGGCAAGttaatttttaaaaaatcattattataaattGTTTCAACCGGTCAGATCACATAAAATCTACTTGTACTGTAATATTCCAGATGCTTGATTACTGTTCTT-AGTGTAGCAAGTTGCCAATTTCTCCCTCCTGAGAATGTGTGACAGATTGTATTACAATCTGTTGATGCTCT-------TGATT-TCAGCTGAAGTACATCATCGTCACTCATGCTAAAAAGCTGGGATGTAT-ACTATAAATGTATAATTTTGTGAAATGTATGATCATATTTTGTGTTTCAGCAATTTCAAATGGTA ...x.::..xx.x..x.:x....:xx..xx...x.......:.xx...:x:....x.....x....:.x..x..:....:x...................::x......-.:.:..:.:........:..:...:...:x.....:.xx............x.:.............:...-------.....-....----------....:.:...:xx.:....::....x..:x..x.-..:.:::.-.:x.x::.:..x:..x...:..x:x:.:..xx.....x.:......:...x..:.. 109M1D71M7D5M1D4M10I34M1D8M1I56M 202/287 70.4% 298/94230402 0.0% 21/287 7.3% 2524140 NA +5118 chr4 + 190214555 18202608 18202607 18202703 96 TGTACGTTCTTGTTTTTCCTAGTAGCAGATGGTGCTGAAAGAAGATCATCTCTGTGGGGCCATTACAGGATAATGCACAGAAATAAATAAGCACAA chr4 - 94230402 15650821 15650820 15650911 78579492 78579491 78579582 91 TGTAGGTACTAACTTTTTCTGGTAGCAGATGGTGCTGGAAGAAGGTCATTTCAAAGGGGTCATTACAGGATAATGTGGAG-----AACAAACACAA ....x..x..x::....:..:................:......:....:..x:x....:...............::x..-----..:..:..... 80M5D11M 72/91 79.1% 91/94230402 0.0% 5/91 5.5% 2551787 NA +10652 chr4 + 190214555 18203421 18203420 18203699 279 CTTGTATAAATTTTATTTCTTATT-ATCCTA-GCCTCAGCAGTATTTGAGGAATATTGTTCCCTTGGCCTAATGCAATTTTTTCCACATGATGTATTCTTGGTCTGTCCCTTATCTCCCCTTCACTTGCTGACACCAGTGTTTAGTCCATTTGGAACTAAAATGCATTGAAAGCAGATACATACTATTTTAACA-----------TTTTGCCTGATTCTTTAACGTAGC-TGTGTTCATTAGCAACAAATTCTGTCTAGCAAGTTGGTTAAATGGCCTTCATCCCTTTTAAGA chr4 - 94230402 15652403 15652402 15652691 78577712 78577711 78578000 289 CTTGTTTAAATTATATTTCCTCTTTACACTGTGGCTCAGCAGTATCTGGAGACTATTGTTCCCTAGGC-TAATGCAATCTTT-CCACACGAAAAGCTCTTGATCTGTTCCTTATCTACACTCCAGTTGCTGGCACCAGTGTTTCATCCATTTGGTGCTAAAATGCACAGAAAGCAAATACATATCATTTCAGCGTTGAGGTATACTTCTTCTAGAATCTTTAGCTCAGCTTATTTTCATTAACCA-AGATTCT-TCTTGTCAGCAATATAGATGCCCTATTGTCCTTCAAAAA .....x......x......:.x..-.:x..:-.x...........:..::..x...........x...-.........:...-.....:..x:x::.....:.....:........x.x..:..x......:...........x:.........x:..........:x.......:.......::....:.:.:-----------..:.x.:x..x......:.x:...-.:.x.......:.x.-.:.....-...x.:x..:x:xx..:...x...x:xx:....:x..:. 24M1I6M1I36M1D13M1D111M11I24M1I15M1D7M1D39M 205/275 74.5% 289/94230402 0.0% 18/275 6.5% 2551018 NA +6086 chr4 + 190214555 18247782 18247781 18247965 184 CATTTGCAGTAGTCCGCCTGGAATTTAAAATTTTATGGCTTATTCCATCAGTCCATGTGATATTACCCTATCTGAATTTAGCTAACTGAGCTAATGTATAATTAGCATTTCTCTCCACTCATCCCTTTGCT-CCCTAATGAGTTGGGAATTATGTTTTCACAGTGTGTACT-GGGAAGGCAGACAT chr4 - 94230402 15658321 15658320 15658506 78571897 78571896 78572082 186 CATGTTTACTAGTTCCTCCATCATTTAATACACTTCAATTTATTTCATCAGTTCTTACGATGTAGTCCCATATGAATTAGTTTAACTGAGCTAATGTATAATTACTGTTTCTCTTCATCCTTATGTTTGCTACTTTAACCAGCTGGGAATTCTGCTTGTATTTTATGTTCCAGAGAAATCAGAGAT ...x.x:.x....:.x:.::xx......x.:x:.x::::.....:.......:.x.::...:.x::..:..x......x:x:......................x::.......:..::.x.x:x......-.::...:x..:........x..:..x:.:xx.:...x.:-.:...:x....x.. 131M1I39M1I14M 120/184 65.2% 186/94230402 0.0% 2/184 1.1% 2589461 NA +3037 chr4 + 190214555 18289700 18289699 18289759 60 AATGAGACTCTGTGTCAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAT chr4 - 94230402 71886267 71886266 71886326 22344077 22344076 22344136 60 AAGGAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAAT ..x...x:...:.....:.........:..:..........:x..:.x:.:.xx:..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -53596567 -40633835 +3093 chr4 + 190214555 18290883 18290882 18290935 53 AAAAAAAAAAAAAAAAAGAGAAAAGAAAACGATGATGAAAGTTATCATTATTA chr4 - 94230402 80007183 80007182 80007235 14223168 14223167 14223220 53 AGAAAAAAAAAAAAAAAGAGAAAAGAAAGAATTAATTAAAGTCAGTATTCTTA .:..........................:x:x.:..x.....:.x:...x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -61716300 -32514102 +3360 chr4 + 190214555 18368831 18368830 18368929 99 TCCTACATGTATATACACACACACACACACACACATATATA----CACACACACACACACACACACACACACACACATAAAAAATTGAGGAGGAGGGCATCCT chr4 - 94230402 66904845 66904844 66904947 27325456 27325455 27325558 103 TCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAAGAGAACATTCT ..x..:.....::..........:..............x..----..x::::.:...xx..:..:..:x:x.x.x..xxxxx..x....:.:...::...:.. 41M4I58M 66/99 66.7% 103/94230402 0.0% 4/99 4.0% -48536014 -45694388 +3259 chr4 + 190214555 18368834 18368833 18368910 77 TACATGTATATACACACACACACACACACACATATATACACACACACACACACACACACACACACACACATAAAAAA chr4 - 94230402 8395795 8395794 8395871 85834532 85834531 85834608 77 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ..::...::...x...:::.:x:...:.:::..::x....:xx.:.................x.....x..:..x.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 9973039 NA +3054 chr4 + 190214555 18368835 18368834 18368898 64 ACATGTATATACACACACACACACACACACATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964821 14964820 14964884 79265519 79265518 79265582 64 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x:...:.x::.:::::.....::::.::........xx........::............. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 3404014 NA +3016 chr4 + 190214555 18369299 18369298 18369364 66 GTATATACACATATATGTATATACGTATATGTGTGTATATGTATATATGTGTGTATATATGTGCAT chr4 - 94230402 51294126 51294125 51294191 42936212 42936211 42936277 66 GTATTTCAGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCAT ....x.xx:.....::....x.::..::.:::x..:........:..x..:........::..... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -32924827 -61305575 +3064 chr4 + 190214555 18369321 18369320 18369399 79 ACGTATATGTGTGTATATGTATATATGTGTGTATATATGTGCATATATATGTATATGTGTATATATGTATATATGTGTA chr4 - 94230402 81094686 81094685 81094764 13135639 13135638 13135717 79 ATGCACATGCGTGTAGATGTATATATATACTAGTAGATGAACCTATATAGGTATACGTGCTTAGGTCTATTTTCATGTA .:.:.:...:.....x..........:.::xx:..x...x:.x......x.....:...:x..x:.x...x.x::.... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -62725365 -31505037 +3097 chr4 + 190214555 18369523 18369522 18369607 85 ATGTGTATATATGTGCATATATATGTGTATATATGTATATATGTATATATGTGTATACACATATGTACACTTATATGTATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACA--TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......:...:........x.:.--.....x..::...:....:x..:..xx:..:.....:.:::....xx.:.::x..:x... 23M2D60M 56/83 67.5% 83/94230402 0.0% 2/83 2.4% 9973735 NA +3390 chr4 + 190214555 18369610 18369609 18369749 140 TGTATTTATACACGTATATATAC-GTATATACGTGTATATATATGTGTATATGTATACATATATACACGTATATACGTATATATCTATATATACGTATATATGTATACGTATATATACACGTATATATGTATATATCTATA chr4 - 94230402 73121069 73121068 73121209 21109194 21109193 21109334 141 TGAAACTGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..x.x:.:.....x:.:.x.x..-...xx:x.....::..::..:.x:...:::...:.:.:.x.x:.:.:x:...:..::...xx:..:.::x......:..x:...:....x....:.x:.:.x.x::.:.:..x.... 23M1I117M 81/140 57.9% 141/94230402 0.0% 1/140 0.7% -54751459 -39478943 +3690 chr4 + 190214555 18369780 18369779 18369856 77 TGTATATATGTGTGCGTATATATGTATATACGTATATATACACATATGCGTATATATACACATATATACACACATAT chr4 - 94230402 8395789 8395788 8395865 85834538 85834537 85834614 77 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.:.........:..x.:......x...:...:...:.x:.:..xx:..:.:.:.....:.:.:.x.....x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 9973991 NA +4406 chr4 + 190214555 18369828 18369827 18369937 110 CGTATATATACACATATATACACACATATATACACATATACGTGTATATATGTGTATACATGTGTATATACACACACATATATATACACACACAGATATGTACATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:.::..:..:..x:.......:...:.:.x.x::..:x..::...::.:.:x:....:.x......:::x::.......x....:.x......x.:::....:.... 110M 70/110 63.6% 110/94230402 0.0% 0/110 0.0% -54751272 -39479130 +3333 chr4 + 190214555 18369864 18369863 18369944 81 TATACGTGT----ATATATGTGTATACATGTGTATATACACACACATATATATACACACACAGATATGTACATA-TATATATGTAT chr4 - 94230402 4481679 4481678 4481764 89748639 89748638 89748724 86 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTAT .:..:....----.....x....:.::.....:.:.x...:......x:.:....x.xx...x.........:.-...x..x.... 9M4I61M1I11M 61/81 75.3% 86/94230402 0.0% 5/81 6.2% 13888185 NA +3001 chr4 + 190214555 18369873 18369872 18369933 61 ATATATGTGTATACATGTGTATATACACACACATATATATACACACACAGATATGTACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ...:.x:..:.....x:.............:...:....:.x...:.:.xx..:.:..::. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 10773460 NA +3440 chr4 + 190214555 18369877 18369876 18369952 76 ATGTGTATACATGTGTATATACACACACATATATATACACACA--CAGATATGTACATATATATATGTATACACACAC chr4 - 94230402 89016082 89016081 89016159 5214244 5214243 5214321 78 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACAC .....:.:....x..:..::........:.x.::::.......--..:..:::....::..x..:...:.:..x.... 43M2I33M 53/76 69.7% 78/94230402 0.0% 2/76 2.6% -70646205 -23584197 +3136 chr4 + 190214555 18370970 18370969 18371018 49 AAAAAACCTAACAACAACAACAACAACAAAAAAAAGCCACAGACCTGAC chr4 - 94230402 25468925 25468924 25468973 68761430 68761429 68761478 49 AAAAAATATATTAACAACAACAACAACAAAAAAACCCCACACACCTAAC ......:x..x:......................xx.....x....:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -7097955 -87132447 +9888 chr4 + 190214555 18388097 18388096 18388366 270 TCTCATTTTCTTTTCCTTTGTTTCC-----AAGCTAAGACAAAAATCTTGGCTATGGGAAGTATTTATTGGGTGCCATTTAGACAAATATAAGAAT----------------GTGATTGAATACTCTCCATGACTGTCG----GTTGAAACTAAACACGGAGTTGCCATGGATACTGGTTGCTTGGCCTCTGCTCCAACACATTAGAGCCTTTTTAGTTCAACAATGTGCAAACCACAGATGTTGCCATGCATTGTATTCATAATCAGCTTGGATCTCTTAGCAGAAGAATATCT chr4 - 94230402 15688807 15688806 15689095 78541308 78541307 78541596 289 TTTCATTTTGCTATGTTTTTTTTCCTCCTAAAACTAAGACAAAAAGTCAGA--AGTAGAAATATTTAT---GAGTCATTTAGAAATATAGAAGAATTCAGCTCAAATGAGTTGTGATTGAATTGTCTTCACAATTGTTGTAGCAGAGAAACTTAATATAGAGTTGCCATGGAGACTGATTCTTTGGCCATTGGTCTAATACATTAAAGCCTTTT-AGTTCAGCAATGTGCTATTTGCAGATGATGCTGTGCATGATATTAACAACTGGTTTGCTTCCATTAAGAGGAAAATATCT .:.......x:.x.x:...x.....-----..:............x::x.:--.xx:...:.......---.x.:........x.x...x......----------------..........xx...:..::.:...:.----:xx......x..:.::.............x....:..x:......x:..x..:..:......:........-......:........x.x:::......x...::.....x:....x.:..:::.:...xx..:x...:x..:.:....... 25M5I21M2D15M3D25M16I27M4I71M1D80M 193/264 73.1% 289/94230402 0.0% 31/264 11.7% 2699290 NA +3395 chr4 + 190214555 18395313 18395312 18395449 137 ATAATAATAACTCTCCTTTATTTAATATTTACTAAATGCCAGGTACTGTGCAGAGTTCTCACAATAACCCTATGAATTCAGTATTATTATCTCCATTTTACAGATGGAGAAACTGAGGCTCAGAGAGGTGAAGTAAC chr4 - 94230402 73089377 73089376 73089502 21140901 21140900 21141026 126 ATAATAATGA--------TACTTGACATTTAT---ACAGAAGTTTCCATTTAAGTTTCTCAGACTGCCTTCAAAAAATGGGCATTAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAAC ........:.--------..:..:.:.....:---.::xx..x.x.::.x:.::x......x.x.:x.:::.x:..x.x:.:....x.:..:.::....::....x::....x......x...x.....:..:.... 10M8D14M3D102M 80/126 63.5% 126/94230402 0.0% 11/126 8.7% -54694064 -39536338 +4469 chr4 + 190214555 18395370 18395369 18395453 84 CTCACAATAACCCTATGAATTCAGTA----TTATTATCTCCATTTTACAGATGGAGAAACTGAGGCTCAGAGAGGTGAAGTAACTTAC chr4 - 94230402 10729167 10729166 10729254 83501149 83501148 83501236 88 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGC .........x....:...:x.x:...----:...:.x.............:...::..........x..x.x....x......:..:. 26M4I58M 66/84 78.6% 88/94230402 0.0% 4/84 4.8% 7666203 NA +3221 chr4 + 190214555 18395381 18395380 18395453 73 CCTATGAATTCAGTATTATTATCTCCATTTTACAGATGGAGAAACTGAGGCTCAGAGAGGTGAAGTAACTTAC chr4 - 94230402 41855051 41855050 41855123 52375280 52375279 52375352 73 CTTTTGTAATCAGCATTGTTATCCCCATTTTACAGGCAGAGAAGGGGACACTCAAAGGGAGGAAGGGGCTGAC .:.x..x.x....:...:.....:...........:::.....:xx..x:....:..:.:x....x::..x.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -23459670 -70770732 +11158 chr4 + 190214555 18398554 18398553 18398978 425 TATATGGTTAATGAAAAGTCAGACAGCAGATGACATTTACCCTGCTAAATGTTGATGATTAAGAAGGAAAAGGTTATATCCTGCTTTTTTTTTTTTTTTTTTTCCACTT--CTGGAGCTTCTGCACAAGGGGGTCAACTGGAATGTCTGCATAAAAGGAATTGCCTGTTTGCGAACAACCGCAGACCAACTCCAGTATTGTTACAATTGCTGTTGATGATGGTAATTACTTTG---TGTCC-----------CCCCCTGGGGATTCAGC----------CTCCCAGTCCCC---GATAGCCAGCTCCCTCCTGGACACATGCCAGCAGCCCGTAATTAAAGTGTTTTCTGAAGGGAGCATCTCTGTGTACTACCCATTGTGAATGATGTCCTTGGAGTCTGGCTGTAGTAAT---TGAAAAGAAATGAGACCTTTCCAGTTTGTCCCTCTTTCTGCA chr4 - 94230402 15693444 15693443 15693881 78536522 78536521 78536959 438 TATATGGTTAATGAGA-GTCATCAAACATACAATGTTTGCCCTGCTAAGCATTGTTTGTAAGGAAAGAAAGG--------TTGCTAAATATTCGCATGTGCTCTAACCTAGCTGAA---TGAATACACAGAGGTCAAGCCTGCTGCCTTAACAAAAGAACACATCT-CTTGTGAAGAGCAA-AGACCAGCTCTAGTATTGTTGTATTTCCTCCAGATAATAGTAATTACTTTGCTTTGTCCGCTTTGCATTGCTTTTTCTGAATTTAACTAGATCAAAGCCTTCAGCCCATAATGATAGCCAGCCTTCCTTTGGATCTCTGCCAGCAGCCTATAATTAAAGTGTTTTCTTGAGAGAGGACCACTG-----TACCTTTTGTGCATTATGTCCTTGGAACTTGACTGTAGTAACTGGTGGAAAAAAAAAAGAAATCTCCAATTTGTACCCATTTCTGTA ..............:.-....xxx.:..x.::.::...:.........:::...x.x:.x.:...:....:.--------:....xxx.x..:x:x.x.x:.::x..:.--...:.---.xx::...x:.:......x:xx:x..:..xx.:.....:.xx:::..-:...:...x.:.x:-......:...:.........::.x..x..x:x...:..:............---.....-----------.::::.xx.:...:.:.----------.:::...:..x:---..........:::.:::....:x:x...........::.................x:..:...x.:.x...-----....:x.....x..x...........:::..:.........:---..:...:...x:...xx.:....:.....x..:x......:. 16M1D55M8D29M2I5M3D47M1D14M1D51M3I5M11I17M10I12M3I71M5D42M3I42M 274/406 67.5% 438/94230402 0.0% 51/406 12.6% 2705110 NA +8597 chr4 + 190214555 18402953 18402952 18403485 533 TTCAAATTGAAG----AAATTTCTTTAAGGTGAATCTTTAATTTTAAGTGGGGCTAACACTTCAAGTGAAATTAAACATTAGTAGATAATGATTTTGATCT-GTTTCCAAGAAAAAATAATTTATAGCAACAGATTTGTTATGGTACTAATTAGTTATTGCACCAGTAATTGCAATATTTAGAAAGATGAGAAAAAAATACCAAATAG-TAGTACAAGTAGTGCAGAGAACAAGAGAGAGGAGTAGATAGGAGAGAGGAAGAAGTATGGAGAGAAAAACGAAAGAGAGAGAGAGAGAGAGAAAGAGAGAATATTTGAAAAGGAGTTGTCAGCCTCTTCTGCCTTGACTCCACCCTTGCTAAAACTGTGTAATTTCCAAGGGGTGAGAAGCTACTTT--TCAGTTTTAAGCTAATGCTTTCCCAGAAAATGTTTTCTTTGCTCCCTAAATTATTGATTGGGCTATTAAGGGTCTAAAATGAAACTTTAACTCATTGTTTTAATCTTCCCAGAG--TGACCTCCTAGAACATACTGACTGAGTTG chr4 - 94230402 15697240 15697239 15697676 78532727 78532726 78533163 437 TTGGAATTGAAGTTTGCAATTTCTTTAATAGCAGCATTTAAATGAAAGTAG---------TACAGGAATGAGAGAACCTTTGCAAAATGTAATTTTGATCCAGTTTCAAGGAAAACATCTTGCTTTGCTGCAGATATGTTTTAGTACTAATTGATTATTGCTTTAGCAGAAAAGCTATTTAGAATTGTTC---CAAGATACAAAATGGATGCTACA------GCACAAAATGGCATTGAGCTATA-------------------------------------------------------------------------------CTGT--GTTTTCTCTTCGTTTATT------TTGCTGAAATTA-GACATGGCCAGAAGGAGTGATACAGCTTCAGTGAATCTTATGCTAATGCTTTCCCAGAAAGTGTTTTCTTTTCTCCCTAAATTATTGATTGAGCTATTAGAGATCTGAAATAAAACTTTAATTAGTTGTTAGAGGCTTCACAAAGTATGACCTGCTGGAACGTATGAATGAAGTTG ..x:........----x...........x:xx.::x.....x.xx....:.---------.x..:.x:x:.xx:...x..x.:.:.xx:.:.........:-.....x.:.....x..xx.x:x.x..x:.....x....x.:.........::.......x::..:.:xx:x:x.........xx:.xx---x..:....x....:.-.:x....------...x.:..:::x.xx...xx:..-------------------------------------------------------------------------------:...--.::.::...x.x..x.:.------.....:...:.:-.xx..xx...:::..x.x..x:.x:...:--.x.:.:...x...................:..........x...................:.......::.:...:....:.........:.x:.....xx.:x....x..:..--......x..:....:..:x:.:x:..... 12M4I35M9D41M1I88M3D15M1I7M6D23M79D4M2D18M6D12M1D29M2I114M2I29M 290/427 67.9% 437/94230402 0.0% 116/427 27.2% 2705713 NA +3069 chr4 + 190214555 18411985 18411984 18412064 80 CTCCTCTCATCTCTTCTTTCTTCCTTTCCTTTCCTTTCTTTGCTTGTCTTTCTTTATCTTTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 28727283 28727282 28727362 65503041 65503040 65503120 80 CTCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCTTCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTCC ....:..:::.:......x.:.::..:..x.x.:.x.::..x.::xx:::x...............:....:.:..:.:. 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% -10315298 -83915104 +3310 chr4 + 190214555 18412011 18412010 18412085 75 TCCTTTCCTTTCTTTGCTTGTCTTTCTTTATCTTTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCCTCCTTCCT chr4 - 94230402 53118151 53118150 53118225 41112178 41112177 41112252 75 TCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT ......x:.:...x..:.:x.............x.xx..:..:.x....x...x..:x..x...:.::.:..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -34706140 -59524262 +3380 chr4 + 190214555 18412051 18412050 18412134 84 TCTTTCTTTCTTTC---TTCCTTCCTTCCCTCCTTCCTTCCTTCTTTCCTTCCTCCCTCCCTCTCTCTTTCTTTCTTTTCTTCTCTC chr4 - 94230402 61964746 61964745 61964832 32265571 32265570 32265657 87 TTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTC .:.....:.x....---.:xx:.x..xx...x:...::.x:.x:........:............:::.:..:..........::.. 14M3I70M 58/84 69.0% 87/94230402 0.0% 3/84 3.6% -43552695 -50677707 +3359 chr4 + 190214555 18412150 18412149 18412221 72 TCTTTTTCTTCTCTTTCTTTCTATG----CTTTCTTGCTTGCTTTCTTCTTTCTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT .:.....:..::.x..:.:...:..----:.::.....x.x.....::....:..........::.:......x.. 25M4I47M 52/72 72.2% 76/94230402 0.0% 4/72 5.6% -37739400 -56491002 +3425 chr4 + 190214555 18412226 18412225 18412321 96 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTT--------CCTTCCTTCCTTCCTTCCTTCCTTC--CTTTCTTTTCTCTCTCTCTCTT chr4 - 94230402 91731746 91731745 91731851 2498552 2498551 2498657 106 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCT ..::.:x.........x::..x.....:...::........:..:....--------:.....x.:::....:....x::..--.x..:x..x...:.:x....:. 49M8I25M2I22M 66/96 68.8% 106/94230402 0.0% 10/96 10.4% -73319520 -20910882 +3041 chr4 + 190214555 18412236 18412235 18412318 83 CTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTTCTCTCTCTCT chr4 - 94230402 12140665 12140664 12140747 82089656 82089655 82089738 83 CTTCATTTCCTCTTTCTGTTCATTTTTCCTTTCCACTCTCCTTTTGTACCACCTGCCTTCTGTCCTATCCTTACTATTTCTCT ...:x....:.::..::x...x.::......:.:x.::.....::x.x.:x...x.....:x....x..:..x..x.:..... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 6271571 NA +3116 chr4 + 190214555 18437123 18437122 18437283 161 TTTTTCTTTATAATATTATATTCC------TTATATATTGTAAGGAATATA-ATACATGATTATATTCCTTGTATTATGTGTGTGTATATATATATAATTTGTTTTTCCTTGAATTTATACACACACACACACACACATATACACAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398734 33398733 33398873 60831530 60831529 60831669 140 TTTTTTTTTTAAACATTCTAAGCTCATAGTTCAGATCTTATGAGAAATATACACACATGCGCACAGACC-----------------ATATAAATGTA-----------TTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:...xx..:...x..xx.:------.:.x..x..:.:..:......-.:.....xx:.:.xx..-----------------.....x..:..-----------:..::.xx.:.:.::::::::.:.....:.....................x.....x... 24M6I21M1I17M17D11M11D60M 91/133 68.4% 140/94230402 0.0% 35/133 26.3% -14961611 -79268791 +3422 chr4 + 190214555 18437148 18437147 18437310 163 TATATATTGTAAGGAATATAATACATGATTATATTCCT---------TGTATTATGTGTGTGTATATATATATAATTTGTTTTTCCTTGAATTTATACACACACACACACACACATATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 89611908 89611907 89612064 4618339 4618338 4618495 157 tatatatataATAGAATACGAAGCATAGATAAATCCTTATCTATCTCCGTATTATTAGTACA-----ACATATAATATAT---------AATATATCTATAC-TATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAG .......xxx.x:.....::.x:...::x..x..:.:.---------:.......xx..:::-----.:.......x.:.---------...x...x:.:..-:.:.:.x.x.:....:..:..:x..............::.......x.::.x:x:...:...:.:.x.. 38M9I15M5D13M9D13M1D69M 97/148 65.5% 157/94230402 0.0% 24/148 16.2% -71174760 -23055642 +3120 chr4 + 190214555 18437236 18437235 18437289 54 CACACACACACACACACATATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:.....:xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -49214848 -45015554 +3061 chr4 + 190214555 18437242 18437241 18437295 54 CACACACACACATATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x.:.....:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -49214842 -45015560 +3539 chr4 + 190214555 18437363 18437362 18437445 83 CTGCAACTTTGAACTCCTGGGCTCAAGGGATCCTCCTGCCTCAGCCCCTCAAGTAGCTGGGACTATAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:.::x:.:..:.....:.....x.x.:.x.xx.x.......::............:....:.--.:..::....::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 240237 NA +3010 chr4 + 190214555 18440242 18440241 18440319 78 AAATTCAAACAAATATATATATATCTGTATATATATACATATATATACATATATATATATATAAAAGCAATGTAATTT chr4 - 94230402 43936355 43936354 43936432 50293971 50293970 50294048 78 AAATTTAAAAATATCTATAAATACCTATATTTATATAGATTTATATGCCTATAAATACCTAAAATACCTATAGAAATT .....:...x.x..x....x...:..:...x......x..x.....:.x....x...:x..x..x.x.x..:x..x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% -25496113 -68734289 +17652 chr4 + 190214555 18441280 18441279 18441775 496 TTGATATGCAAATTCCTAATTTACTTAAAGCACACTGTCGTGCATTATAATAAAGCCTAATACATGCTTCTATGTAATTATGCGTAATAACCAGTGATCAG----------------AGGGAGGAGGGAAGGCGAGAAGGGAATTGTGTTTCCAGCTGGCCCTCTACACCTGCAAATAACAGACAACTCCTTTCAGTGTAGAGGAAACAAGATAATGACAGTATGATATTAAATACAAACATTAATTCTTGGGAACAAAACATAAAGAAGAGGTCTTTCAATTAAGATGTGTGATAGTGAGCAACTTAAATTACATTCCACATCATCTTAAGGAGAAATAAGACCAAGCAGAATGAAAACCTTAATTTGCTATTTACTGCTATACTCTGATGATATGAATCTTATTATT--TATTTAAAGAAATATTTGTCTGGACCACTTAAAC-----CCTGTGGTAGGATCCACTTTTCATACTCA-TTTGGTTTGGTTTAAGAACTAAATTGCAATAACATGGTCT chr4 - 94230402 15710488 15710487 15710984 78519419 78519418 78519915 497 TTCAGATGTAAATTCCTAACTG--TTAAAACATGCTGTCATGCAATATAACAACATTTAATGCATGCAACCATGTAATTATGCATAATAACTAGTGATCATTGTGTATGCTGATAACAAGGATAAGGGGAGGCTG--------TGGTGTGTTCAGCTGGTCCTCTGCACCTGCAGAAAGCAGAGAACTCTTCCCACTGTGGAGGAAACAAGATAATGACAGTATGATATTAAATGCAAACGTTAATTCTTTGGAGTAGAATACAAGGAAGTAGTCTATCAATTAAGATGCATTAATGTGAAC-TCTGAAATTATGTTGCCTGTCATCTTAAAGAAAATAAAGGACTAGTGGAATGAAATTCTTAATTCATTGTTTACCACAAAGCTGT-------TAAATC-TATTATTTCTACTTTGGAGAAGATTTATATTGG-CGTTTAAGTTTCTACCTGTGATAAA---CTATGTACACATTAACTTCTACTTGGGTTCTGAAGTAAATAATGAAATCATCATCT ..x.x...:..........:.x--.....:..::.....:....x.....:..x:::....:.....xx.:............:.......:........x----------------.:...x:....:....x:--------.x....x.:.......:.....:........:.x.:....x.....:.::..x...:..................................:.....:.........x...::.:..:.:..:....x:....x............::.x.xx....:.-x..x......::..x.x::.........:..:..xx...:x.x..::........x:.......:::.:.....::.x.x:..x.-------.:....-.......--..:..x::::..x....:.x.x.:-.::....::-----......:..::---.xx.x.x..:.:.x.-..:x::....x..xx...x.....x:::.x.x...x:... 22M2D77M16I18M8D159M1D85M7D6M1D7M2I24M1D9M5I11M3D15M1I40M 342/473 72.3% 497/94230402 0.0% 47/473 9.9% 2730792 NA +3428 chr4 + 190214555 18469594 18469593 18469694 101 AGTGAGCCAAGATCGTGCCA----TTGCACTCCAACCTCCATCACAAAAAACAAACAAACAAACAAACAAAAAACAAAAAAAAAAACCTCATATGAAAAACATTT chr4 - 94230402 69241291 69241290 69241388 24989015 24989014 24989112 98 AGTAATCAAGAATCATGATAAGAATTGCCCCCCACCCCCCA-------AAAAAAACAAACAAACAAATAAATAAAAGAAAAGAAAACCTAAATTCACAAGCATCT ...:.x.x.::...:..x:.----....x.:...x..:...-------...x...............:...x..x.:....:.......x.xx.x.x..:...:. 20M4I17M7D57M 69/94 73.4% 98/94230402 0.0% 11/94 11.7% -50771697 -43458705 +3472 chr4 + 190214555 18469612 18469611 18469688 77 CATTGCACTCCAACCTCCAT-CACAAAAAACAAACAAACAAACAAACAAAAAACAAAAAAAAAAACCTCATATGAAAA chr4 - 94230402 71528688 71528687 71528765 22701638 22701637 22701715 78 CACTGCCCTCCCCCTTTCTTACCTAAAAAACAAACAAACAAACAAAAAAAAAACCACAACAGAAATCCATTGTGAAAA ..:...x....xx.:.:.x.-.x:......................x.......x.x..x.:...:.:xx.:...... 20M1I57M 58/77 75.3% 78/94230402 0.0% 1/77 1.3% -53059076 -41171326 +3334 chr4 + 190214555 18469625 18469624 18469710 86 CCTCCATCACAAAAAACAAACAAACAAACAAACAAAAA-------------ACAAAAAAAAAAACCTCATATGAAAAACATTTTTACTGAAAATGTTTT chr4 - 94230402 64558410 64558409 64558508 29671895 29671894 29671993 99 CCTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAATAAATATCTCTCTGTGAAAGCTTTTTCACCCTAAACTTTTT .....x:.x.......................x.....-------------.:.....x...x.:...x:xxx:...:.x....:..:xx...:x.... 38M13I48M 64/86 74.4% 99/94230402 0.0% 13/86 15.1% -46088785 -48141617 +3479 chr4 + 190214555 18473543 18473542 18473612 70 CTCCCAGCCTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAACTGGAATTACAGGTGCAGGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:.::.x:.......x...x..x.x........::......:......:....x.....--....::.. 60M2D8M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 276404 NA +3165 chr4 + 190214555 18502019 18502018 18502107 89 GTAGCTATTATATCATTAATTTGACAGATGAGAAAACTGAGGCTTAGAGAAGTTAAGTAATTTACTAACAGCC-----ATAGAGTCAGGAAATG chr4 - 94230402 10729190 10729189 10729283 83501120 83501119 83501213 94 GTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCCAGGTATG ...::..:...xxxx.:x....x....:..:............x:.x.x.:............:.:x.x..:.-----.:...:..x:.:x... 73M5I16M 61/89 68.5% 94/94230402 0.0% 5/89 5.6% 7772829 NA +4447 chr4 + 190214555 18534782 18534781 18534870 89 TCTCTCTATATATATATATATATATATATATGTTGCTCTCTCTCTCTCTCTCTCTATATATATATATATGTATATCTGTATCTATATAT chr4 - 94230402 33033678 33033677 33033766 61196637 61196636 61196725 89 TCTATCTATATCTATGTCTATATAAATATCTATCTCTCTCTCTCTCTCTCtatatatatatctgtatttatatatatagacatagatat ...x.......x...:.x......x....x.:.:x................x.x.......x.:...x.:.....x.:x.:x..x.... 89M 68/89 76.4% 89/94230402 0.0% 0/89 0.0% -14498896 -79731506 +3591 chr4 + 190214555 18596256 18596255 18596334 79 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACATATATATATACACACACATATATATATAGACAA chr4 - 94230402 8395789 8395788 8395867 85834536 85834535 85834614 79 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .......:......::.:x:::.....x..:....:...::x.....xx...:.:.........:.:.x.:.:.:.::. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 10200467 NA +3036 chr4 + 190214555 18596260 18596259 18596299 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -71225022 -23005380 +3036 chr4 + 190214555 18596262 18596261 18596301 40 TGTGTGTGTGTGTGTGTGTATATATATATATATATATACA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......:...............:.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -71225020 -23005382 +3100 chr4 + 190214555 18596268 18596267 18596319 52 TGTGTGTGTGTGTATATATATATATATATATACATATATATATACACACACA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .......:......x.:.x.....:.:.:..x.....:...::.......:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -30818484 -63411918 +3077 chr4 + 190214555 18611636 18611635 18611700 65 GGGAGGGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAGGGGGGAG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ...::.::.......::....:...:.x....x...x......:.::.:.::x..::.x....:. 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% -50455049 -43775353 +3150 chr4 + 190214555 18611999 18611998 18612106 108 GAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAGGTGAAAGGGAGGGAGGA chr4 - 94230402 30232146 30232145 30232242 63998161 63998160 63998257 97 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAA-----------AGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAA .....x..:.x.:..xx::.:..x.::....x.:.:..x....-----------.....xx........:.:x..x.........:...x:xx:.:...:.:...::. 43M11D54M 64/97 66.0% 97/94230402 0.0% 11/97 11.3% -11620147 -82610255 +3077 chr4 + 190214555 18612096 18612095 18612160 65 GGGAGGGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAGGGGGGAG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ...::.::.......::....:...:.x....x...x......:.::.:.::x..::.x....:. 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% -50454589 -43775813 +3150 chr4 + 190214555 18612237 18612236 18612344 108 GAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAGAAAGGGAGGAAGGAAGGAAGGAAGGTGAAAGGGAGGGAGGA chr4 - 94230402 30232146 30232145 30232242 63998161 63998160 63998257 97 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAA-----------AGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAA .....x..:.x.:..xx::.:..x.::....x.:.:..x....-----------.....xx........:.:x..x.........:...x:xx:.:...:.:...::. 43M11D54M 64/97 66.0% 97/94230402 0.0% 11/97 11.3% -11619909 -82610493 +3077 chr4 + 190214555 18612334 18612333 18612398 65 GGGAGGGAGGAAGGAAGGAAAGGAAGGCAGGAAGGAAGGGAAGGAGGGAGGAAGGAAGGGGGGAG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ...::.::.......::....:...:.x....x...x......:.::.:.::x..::.x....:. 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% -50454351 -43776051 +3204 chr4 + 190214555 18612437 18612436 18612531 95 GAAGGAAGGAAGGG-----AGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAGGAAAGAAGGAAGGAAGGG chr4 - 94230402 30232146 30232145 30232243 63998160 63998159 63998257 98 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGA--AAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAG .....x..:.x.:.-----....x::....:x.:.:.:x...--......xx........:.::..x:...:....:...x:x:....:.:......::. 14M5I23M2D56M 63/93 67.7% 98/94230402 0.0% 7/93 7.5% -11619709 -82610693 +3826 chr4 + 190214555 18612446 18612445 18612585 140 AAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGG----AAGGAAGGAAAGAAGG-------------AAGGAAGGGAGGGAGGGAGG--AAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGA chr4 - 94230402 44053977 44053976 44054135 50176268 50176267 50176426 159 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAA ......x:x:x....:.x.....:.::..:..:......::x.::..::::......x:..----:.:...:........:-------------..:...x:..::..:x:.x.--..:.x...x...x:.......:....:::.x..x:..:x..:. 61M4I16M13I20M2I43M 89/140 63.6% 159/94230402 0.0% 19/140 13.6% -25441531 -68788871 +4903 chr4 + 190214555 18612479 18612478 18612740 262 GAAGGAAGGAGAAAGGCAGGG-AGGGAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAG---GGAGGAAGGAGGGGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAGGGGGGAGGAAGGAAGGAAGGAGAAAGGCAGGGAGGGAGGAAGGAAAGGAGGAAGGAGAAAGGCAGAGA--GGGAGGAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAGGAAGGAAGAAAGGGAGGGAGGGAGGGAGGAA chr4 - 94230402 57300994 57300993 57301255 36929148 36929147 36929409 262 GGAGGCGGGGGAAAGGTGGGACAAGTGGGAATGTAGGGAAAAAGGAAGAAATGTTTGGAATTTACGAGAAAACGTGGGAACGTAGGAGAAAAGGTAGGGAAAATGTAAGAATGTAGGGG---ATAATGTGGGAAAAGGTGGGAAAGCAGGGGAAATGGTGGAAAAAAATTGGGAATGTTGG--GGAAAAGGGTGGAAAATGTGAGAATGAAGAGAAAAACGTGGAAAAAGTTGGGATTCTAGGGGAAATGGAGGGA-AAAGGTAGAAA .:...x:..:......::..:-.:.x:....x.x...:..:.......:..x.xxx...:---:x::...::x.x...:.x.x....:::....x.....::.x.x...:.x.x:..:.---:x..x.x...:::...x:....:.x...:....x.xx..:.:::.:xx:....x.xx..--...:..:..::..:.--.x...:.x.:.::....:.x.x:::::.:.xx....xxxx:.::....x.......-::...x..:.. 21M1I38M3I56M3D59M2D15M2I56M1D11M 152/256 59.4% 262/94230402 0.0% 12/256 4.7% -38688515 -55541887 +3763 chr4 + 190214555 18612638 18612637 18612703 66 GGGAGGAAGGAAAGGAGGAAGGAGAAAGGCAGAGAGGGAGGAAGGAAGGAAAGAAGGAAGGGAGGG chr4 - 94230402 93521794 93521793 93521858 708545 708544 708609 65 GAGAGGATGGAAAGGCAGATGGGGAAAGGCAGATGGGGA-GAGGGGAGGAGGGAAGGCAGGGAGGG .:.....x.......x:..x..:..........x:....-..:..:....::.....x........ 39M1D26M 52/65 80.0% 65/94230402 0.0% 1/65 1.5% -74909156 -19321246 +3206 chr4 + 190214555 18615711 18615710 18615780 70 TATCTATA-TATACATAGATATGTACA----CAGAGGGAGAGAAAGGAAGGGAGGGATGGAGAGAGAGAGAGAAA chr4 - 94230402 89611987 89611986 89612061 4618342 4618341 4618416 75 TATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAA ........-....:.x......:.:..----.....:......:......:...:x.x..x:x:...:...:... 8M1I18M4I44M 54/70 77.1% 75/94230402 0.0% 5/70 7.1% -70996276 -23234126 +3119 chr4 + 190214555 18617028 18617027 18617077 50 ACAAAACTCTGTTTCAAAAAAAAAAAAACAAAACAAAACAAACAAACAAA chr4 - 94230402 1220209 1220208 1220258 93010145 93010144 93010194 50 ACAAATCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGA .....x...x:xxx............................x.....:. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 17396819 NA +19748 chr4 + 190214555 18659692 18659691 18660043 352 TTACATTCTCTTGAAGTTCATGATTAC--CCTGCTGTTTAAAAAACATTTTTAATATAGGAGACCATTAATTACTAGGATTCTGATTATAACTGCCTAGTCTCGGAATTGATGAACAAAGCCATTTTAGAAAGCAATCAATTTGAAATCTAATTTGTTGGCGAAATGAACCATATAAACAAAATGCCACTCGCAGTTTGTCTAAAATGAGATGTGCTTAACGAGCCCATCGTCTTCTGTGATCCTCATCACTATGGGTCTCAGCTACCTCAAATGTCATCAGTCAGATCCAGCCCACAGAAAGCTGGAACAGAACACTGCACTATGAGCAGACTAAAATGGGAAACAGATGGCT chr4 - 94230402 15768294 15768293 15768647 78461756 78461755 78462109 354 TTAACTTCCCTTAAACTTCAATACTACTGCCAAGCATTTTAAGAACATTGTTGATTCAGAGGCTTATTAATTACTAGTATAGTCTTTGTAATTGCCTAGTCTAGAAATTGATGAACAAAGTCATTTCAGAAAGCAATCAATTTGAAATCTAATTTGTTGGCGAAATGAACCATATAAACAAAATGCCACTTGCAGTTTGACTGAAATGAGATGTGCTTAACGAGCCTATCATCATCTGTGATATTCATCTTAATGGGTCACAGTTACATAAAATGTTATAAATCTGAACCAGTGCACATAAAGCAGAAATATAATATAGTATTCTGAAAAGAATAAAACATTAAACAGATGGTT ...xx...:...:..x....xx.:...--..x:x::...x..:......x..:..x:..::.x::............x..xx.xx..:...:..........x.:...............:.....:...............................................................:........x..:.......................:...:..x........x:.....x:x.......x...:...x.x......:..x.:..x..x....:x....x.....x.:..:.x..:.:x.:.:.x...:x...x.....::xx..........:. 27M2I325M 276/352 78.4% 354/94230402 0.0% 2/352 0.6% 2891398 NA +3004 chr4 + 190214555 18663813 18663812 18663878 66 ACTGTCTCAAAAAGAAATGAAAAAAAAAAAAAAAAAAAAAAAACAAAGAAGAAGAAGGAGAAAAAC chr4 - 94230402 77135764 77135763 77135829 17094574 17094573 17094639 66 ACTTACTTGGGAGGAGGAAAAAAAAAAACCAACACAAAAAACACACAGAAGAAAAAGAAGAAAAAC ...xx..::::.:..::x:.........xx..x.x......x...x.......:...:........ 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -58471951 -35758451 +3032 chr4 + 190214555 18663827 18663826 18663880 54 AAATGAAAAAAAAAAAAAAAAAAAAAAAACAAAGAAGAAGAAGGAGAAAAACCT chr4 - 94230402 47342992 47342991 47343045 46887358 46887357 46887411 54 AGATGAATAAGAAAAAGAGAAAAAGAAAACAAAACAATAAAAGGAGAAGAAACT .:.....x..:.....:.:.....:........:x.:x.:........:..x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -28679165 -65551237 +3070 chr4 + 190214555 18665908 18665907 18665966 59 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAGTGTAATGCCTACTCAGATTTCTTTTCA chr4 - 94230402 85416503 85416502 85416554 8813849 8813848 8813900 52 AAAAAAAAAAAAAAGAGAGAGAGAGAGAAAAATG-------TTCCAAGGCTTTTTTTCA ............................:..:..-------.x.:x..::..:...... 34M7D18M 44/52 84.6% 52/94230402 0.0% 7/52 13.5% -66750595 -27479807 +3512 chr4 + 190214555 18704601 18704600 18704753 153 TTTCCTCTCTCTT----CCTCCCTCCCTTCCTCCCTCCCTCCTTCCCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTC-TTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 92912892 92912891 92913049 1317354 1317353 1317511 158 TTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCT ....:..:.x...----:...:..:..:...::...xx...x..:..x...:::x..:.xx::x..........:.:.:.-....:.....::...xx::..x:.:.x..x.:..xxxx.......::x.:::.xx...x:x.x.:.:::.x..:... 13M4I63M1I77M 91/153 59.5% 158/94230402 0.0% 5/153 3.3% -74208291 -20022111 +3406 chr4 + 190214555 18704613 18704612 18704762 150 TCCTCCCTCCCTTCCTCCCTCCCTCCT----TCCCTCTTTCTTTTCTTTTCTTTTCTTTTC-------TTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTTTCTTTC chr4 - 94230402 62059643 62059642 62059808 32170595 32170594 32170760 166 TCTTCCATCTCATCCTCATCTTCTCTTAAAGTCTGTCATTGGTTGCTCCTGTCTTCTCTTCATTTGGTTTTTTTGTTTGTTTTTTTTAACCTCTTCTGTTTTCTATCAGAACTTCTGGTGCTCTTCCTTTCTTCCTTTATGCATTATCTTTAGATTATTTTGTTTC ..:...x..:.x.....x::::...:.----..:x..x..xx..x..::.x.:....:...-------...:..x...x...:....xx::....:.x......x..----:....xx:x:....:.......:....x.x:x..-.....xxx.:x....x.... 27M4I30M7I39M4I34M1I20M 100/150 66.7% 166/94230402 0.0% 16/150 10.7% -43355030 -50875372 +4044 chr4 + 190214555 18704642 18704641 18704821 180 CCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTT--------TTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTT------------------CTTTCTCTTTC-------------------------TTGCTTTCTTGCTTTT------CTTCTTTTTCTTTCTTTTTTCAATGATGTCTCACTCT chr4 - 94230402 88451619 88451618 88451855 5778548 5778547 5778784 237 CCTTTTTCCTTTCCCTTGTTTTTTTGATATTCATTAGCTTTTCTGTAATAGGTGTGCTTACTTCTCTCTCATTTCTGTCTTTCTCCATCCCTTCTCTTCTATTCTTATTTATTTATTTTTCCTTCAACCAGCATATGACCACCATTCTTTTTCCACATTTCATCTCTTCTCATAAATATTTCTTTCATCCTTTTTCATCCtttttttttttttttttttttttttttttcttACTCT ...:....:....::..x....:..xx:x...x.:xx::.....x.--------.x...x...:...:.:x.....x.......::x.::...:::....x.::..x...x...x...:.::..------------------.x....:....-------------------------..x.....x.x.....------:..:.....:...:......:xx.xx.x...:..... 46M8I70M18I11M25I16M6I37M 123/180 68.3% 237/94230402 0.0% 57/180 31.7% -69746977 -24483425 +3249 chr4 + 190214555 18704646 18704645 18704734 89 TTTCTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570553 41570552 41570641 52659762 52659761 52659850 89 TTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ...x...x:.x.:...:.x:...:...:..............xx:..x.x:xx..:x...:::....:.xxx............xx... 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% -22865907 -71364495 +3293 chr4 + 190214555 18704650 18704649 18704755 106 TTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 73388657 73388656 73388760 20841643 20841642 20841746 104 TTTTATTTCATCTGCATTG--TTCTTCATTTTTTCTTTTTACCTCGAGTCTTTTTTTAGTTACCTTATATCTTTGTTTTTGTTTTCTGATCCTTTTTCCTTTCCTT ....x...:x.:.x.x..x--......x..:.........x::..xxx......:..xx..x.:..x.x.....x...:.x.:..::xx..:..:..:.....:.. 19M2D85M 70/104 67.3% 104/94230402 0.0% 2/104 1.9% -54684007 -39546395 +3264 chr4 + 190214555 18704658 18704657 18704733 76 TCTTTTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT .:....:.....:x.:....:.x.xx.xx..:.:..x:x......:.::.:............::.:......x.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -37446892 -56783510 +3031 chr4 + 190214555 18704662 18704661 18704737 76 TTCTTTTCTTTCTTCTTTCTTTCTTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ..:....:....:x:.....:.x.xx:xx..:.:..x.x..::..:.::.:............::.:......x.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -37446888 -56783514 +3015 chr4 + 190214555 18704685 18704684 18704759 75 TTTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT chr4 - 94230402 22515278 22515277 22515352 71715051 71715050 71715125 75 TTCTTTTTTCTTTTGTTGCTTTTGTTTGTTTTAAACTTTCCTTCTCTCTCTCTTCCTGCCTAACTTTGCTATTCT ..:..:........x..x::...x...x...:xxx.....:....:...:....:..x:..xx....x:.x.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -3810593 -90419809 +3086 chr4 + 190214555 18711897 18711896 18711972 76 TTTTCCTTTTTTCTCTTCCTTCCTTTTTCCCATCCTCTCTTGATTTCTCTCTCCCTCCTTCTCTTCCCTCTCTTTC chr4 - 94230402 179500 179499 179569 94050834 94050833 94050903 70 TTTTCTTCTTCTCTCTAACCT------TTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTC .....:.:..:.....xx.:.------.:x.....x..:..x:.:.:.::............:........:::.. 21M6D49M 50/70 71.4% 70/94230402 0.0% 6/70 8.6% 18532397 NA +3122 chr4 + 190214555 18732102 18732101 18732184 83 ATTTATGTGTATATATATAGATATGCACATACATGTGTATGTATATATAGATATATGCATACATACATATGTGTATATGCGTA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x.:...:.:.:.::...:.:...:.:x.....:......:x..:..x:...:.::..:...:...:.x::::.x...x:.. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% 10336314 NA +3901 chr4 + 190214555 18741344 18741343 18741406 63 ATATACACATACATATATATACATACACTATATATACATACGCACACACAGACACACACACAC chr4 - 94230402 67999885 67999884 67999947 26230456 26230455 26230518 63 ACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGACTTGCAC .:.:......:.........x...:...........:...:.......x.:...x..x::... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% -49258541 -44971861 +3123 chr4 + 190214555 18742420 18742419 18742491 72 CTGGTTTTATAACAGACAAAGAGGAGGACACACAAGAGAGAAAACCAGGTAAAGACAGAAGCAGATACTGGA chr4 - 94230402 86819759 86819758 86819830 7410573 7410572 7410644 72 CTGTTTTGGAAACAGACAAAAAGAGGGACACACTAAAGAGAAAACTGAGATAGGGTAAAGAGCTATACTGGA ...x...x:x..........:..::........x.:.........:::.xx.:.::.:.::xxx........ 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -68077339 -26153063 +3256 chr4 + 190214555 18769878 18769877 18769943 66 AGACAAACAGAACCAATATGAAATATATATGAAATACATATGTTTGTGTGTGTGTGTATATATATA chr4 - 94230402 53931676 53931675 53931741 40298662 40298661 40298727 66 AAACACACACACACAAAATAAAATAAATCTCAAATACATATGTGTGTGCGTGTATATATATGAATA .:...x...x.xx...x..:.....x..x.x............x....:....:.:.....:x... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% -35161798 -59068604 +3182 chr4 + 190214555 18769922 18769921 18769973 52 TGTGTGTGTGTGTATATATATATGTATATAATTCATATATATGTATAAAATG chr4 - 94230402 63396167 63396166 63396215 30834188 30834187 30834236 49 TGTGTGTGTGTGTGTATATATATATATATAATACATAT---TGTATACCATG .............:.........:........x.....---......xx... 38M3D11M 44/49 89.8% 49/94230402 0.0% 3/49 6.1% -44626245 -49604157 +3652 chr4 + 190214555 18837128 18837127 18837239 112 TTTTCTTCTTCTTCTTCCTCTTCTT---CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTT chr4 - 94230402 84765849 84765848 84765963 9464440 9464439 9464554 115 TTTTCTTCTTTTGCATCCTCTTGTTTAGTTTCGTCTTTGCCTTTGGCTCCTTTCTTCCCTTTTGTTGCTGCCTTTTTGTCTTCCTTTTTATCGTTTGCTGCCTTTTCTTTCTGTT ..........:.x.x.......x..---:...x....:x:...:xx..:...::.:::...:.x:.x..x.:.:..:x.......:..:x..x.::x..x.:.:.....::.x.. 25M3I87M 72/112 64.3% 115/94230402 0.0% 3/112 2.7% -65928721 -28301681 +7652 chr4 + 190214555 18846026 18846025 18846630 605 GCATAATATCAAGTCATCAATCACCAACC-ATAGAGTTAACCTCCTGA-----------GAAAAAAAAAAAAACTTTATCATTTGCCAATTGGAAAGAATACAATTGACTTGAACCAGCTGGCTTTGGCCTCTCTGAAAGGCTGTGACCCATTTAATCAGTTTGGAATGCATCCC-TAA-CTTTGAAGGTAGATCAGGAAGGATGGCAAGC-----------ATGAACTAAGTCAACTA-GGCCCACAATCTCC-CATTTAAAGTATTTGATGTAAGAGACACAATGATTAAAAAAGTAAAAGCTATGTGACTGGGGTCAAGGGTAAGAGTAGGAAGATGGGTTATTCTTTCTGATTTCAAAAACTGACAAACAGTGTTTAGTTTGGAAAGACCTGAAAACCCTCACATAACTCAGCCTGTGCTCCATTTCAT-CAGAAGTGTAGGGAAATAATGAAGTCTGC-AGTTCCTGCTTTCTGTCTGTCATCTAAGCCATTCCAGGGATAATAATCCTGGGTAGTGTCTTTCAGCTGGAGCCATTTCCCTGGAGAGATG----GAGTTATTGCAAGCTTATATGCTTTCTCTTACCTGGTTTTGATTTTCCCTCTTCCTAATGCAATTTCACTGATCTCTTG chr4 - 94230402 15816199 15816198 15816781 78413622 78413621 78414204 583 GTATACTACCAGGTCATTAATCATTAGTAGAAAGAGTAAAGGTCCCAATTTAGTGCCCTGGGGAGACATCTCCATTAATCGCTTGCCAATTCGAGGGGACACAATTGACTTTAACCTGCTGGATACGGTGCATAGGAAAAGCTCTGACCCATTTAATCAGCCTGGAATGTGTTCCATAACCTTTCAAGTTGGATCAT--CGAATGTCAAGTTCTGTCGAAGGCTTTACTTAGTCAACCATGACTGGTAACCTCCTTATCT------TTTCATGTCAGAGGTACAATAGTT---------------------------------------TTATCAACATGTGTGGCTATTTATTTTTTTTAAAGCTGAAAAACTGTGTTCTGTCCAAATGGTTTTGAAAGATTTACTGTAATGGCACTGGTAACATATTTTATGCACAAGCTTAATGAAAAAGTGAAATTTCTAAGTGCTCTTTTTTTCTCTGTACTTTTATCTGCACTATGAATAGTAAGCATATTTAGTCTGCTTCAATAGTAA--ATTTCTTCAGAGACTTGATAAAAATTAATAGAAGACCCTCCAGTTTCTGATACATAGTGGGTGCTTTCCTTTCCTCT------ATTTAGCACATCTTTTG .:...x..:..:.....:.....::.::x-.x.....x..xx...::.-----------.:::.:.x.xxxxxx..x...::.........x..::.:.:...........x....x.....x.x:..:x:x.xx....:...x................::.......::.:..-...-....x...x.:.....x--x.:...x....:-----------x.xx...x.......:.-.:.:x::..:....-:..:.------...x....x....::.....::..---------------------------------------x..xx..x...x..x::.x...x.xx...:x...:....x....x.....:x..::::.x:.x::.....:x::.xx::...:xxx:.:x..:x:x:....:..-..x...:x..:x....x.:....:.:.x:-...x.::x:...:.x.....xx.:.x.x.:::x.:.x.:...:...x.x.:xx....x.x:....::x.x.:--.....::::....xx..----:.:...x.:x...x::x.x::x.....xx...x.:..xxxx::.....:.::::..------....x:.xx....:... 29M1I18M11I116M1I3M1I17M2D12M11I17M1I14M1I5M6D24M39D104M1I29M1I72M2D17M4I56M6D17M 338/550 61.5% 583/94230402 0.0% 88/550 16.0% 3029827 NA +3011 chr4 + 190214555 18854649 18854648 18854724 76 AAAAAACAAAACAAAACAAAACAAAAAAACCAAAAAACTCTTTCATGTCCACTTCACAAAAGAAAACAGCATTGTG chr4 - 94230402 11124086 11124085 11124161 83106242 83106241 83106317 76 AAAAAACAAAACAAAACAAAGAAAGCACACTGAACAGCTCCTCCAGGTCTGTAAGAAAGAAGAGCACAGTGCCGTG ....................:x..:x.x..::..x.:...:.:..x...:::xxx.x.:....:x....::::... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 7730563 NA +22396 chr4 + 190214555 18857155 18857154 18857743 589 GAGAGAGGGTACTTTGCT----CATCATTTTCAGATTCCCAGTGAATGCTTACATTGCCTAGTA-TACCAGTTTTGAAGTGTGATCTTTAAAAAAATACTCAT----------------TTTCTGCATAGTGTTAAGAATGCATTTCTCTGTGCCTGGAGTCATGAACCTGACACAGTTAACGCAGTGAAATCTACCATACATTTAATCAGAGGTACTTAATTTGATTTTCTAAAATTAAGCAGAGAATCAGTTTGCCATTAGGTCTGAGAATTACTGCATTTCTGAAGTTACTCCGCATACCCC--AAAAGGGCTTTATTGGATATGAATAATAACAACCTACAAATATGTTGATGATAATGAGCAT-CTAAATGTTCTGCAAAGAAAAAAAGACAAAGAAAATCCCTGACAAGCATGAATGTTGACGCATGATGGCAAGAATTTTTAAAATTTATGAATATTACAACATGAA-------------------------------AAAATAATTATGAATAATAAAAATCTGTTACAATAATTAGCTGTAATGAATGCTCATGGTGAGTTAAATGAACTGGAACAATTTAAGGCAATAGCACATAATTTGCATTTTGTGTTATGTCAGATCATTTTATCATTAG chr4 - 94230402 15817293 15817292 15817901 78412502 78412501 78413110 609 GAGAAGGAATTCTTTACTTTTTCAACCCTTTCATTTTACAAATTCATCTTTAAAATGCCTGATAATATCATTGAATGAGAATAATATTGAAAGTAATGATGATAACAACACCGAAATAATTTCTGTCTAGATATAGG--------------TGCCT----TCAAGTGTCTGACAAAGTCATCACAA-GGAATAAACTATACATTTTATTAGAGACATTTAATTTCATTTGCTAAG-TTAGGATCAGCATCAGTCTGTCATTAGGTCTAAAAG--GATGCATTTAAGAAATAGTATTGCATTTCCTTTAAAAGATTTTTACTAGATTTGAATAATAATAGCCTACAGACATATTAATGATAATGAGTATGCAAAATGTTCTATATAAAAGAAGA-------------TCTGACAGGCATGAATGGTGACAGATGATGACCAGAATTTTCAAAATTTATGATCATTACAATGTGAATTTTCAAAATTTATGATCATTACAATGTGAAAAAGTAATTATGAATAATAAAAATCTGTTACAATAATTAGCTGTAATGAATGCTCATAGCAAGGTAAATGAACTGGAACAATTTAAAGCAATAACATACAATTTGCATTTTATAATATGTCAGAACATTTTATCATTAG ....::.::.x....:..----..x.x:.....xx..x.x.:.xx..x:...x.x.....::..-..:..x.xxxx:..x:.:..x..x...:x...:x.x..----------------......:x...xxx..:.--------------.....----...x.x::......x...:.x.:..:-.:...xx..:........x..:....::.:.......x....x....:-...:.xxx..x......:..:..........:.:.:--:x.......xx...:.x::x::....x:..:--.....:x:....:.:...x..........:.:......:.:..:..:...........:..-.x.........::.x.:..:..:.-------------:......:.........x....:x......:.x........:...........x:.......::....-------------------------------...:.....................................................:.::..x......................:......:..:.:............:.:x.........x.............. 18M4I42M1I38M16I18M14D5M4D26M1D48M1D36M2D31M2I61M1I24M13D68M31I139M 419/554 75.6% 609/94230402 0.0% 90/554 16.2% 3039862 NA +11953 chr4 + 190214555 18860439 18860438 18860804 366 ATTTGTTGTTTTTACATTAATTGTGTGT-GTTTGTCATTTCTGGGTCAAAGTAAATTTTTCTCTAAACCAAATACTTTCATGTAAGACAAGGGCAGTTGGACATCAAAATATGTATTCCCCCAGGAACTTCTATCAAACTATTTCTTTTGATAACATTCTGCCTGACATGTTCAGTGCACCCATTACATCAAAGC------TGATTCTGTCTTAAAAAAAAAAAAAAAAGAAAAAGCTCTTTAATTTTGTTTTTCTTAGAAAATGCATGTTTCAGTTTTCTCTCCATGTATATCTTTAAAACCGTTGATGTACTTTCAAAAGAGGATTTTCAATAACCTTGAGTAGAGATGTAGAATGCACACTTCTTATTTT chr4 - 94230402 15820715 15820714 15821058 78409345 78409344 78409688 344 ATTTTTTTTTTCCCTGTTAACTCTGAACAGTTTGTTTTTTCTGGGTCAAA-TGAATTTCTACATAGACCAAGTACTTTCATGTATGACAAGGACAGTAGGACATCAAAACATATATACCCCAGGGAATGTCT-TTAAACTTCTCCTTTTGATAATACTCTTCCTGACATGTTCAATGCATCTTTCACATCAAAGCtttattttattttatttttttaaaGAAACAG-------------CTTAAGTCTGTTTTTCTTAGAGAAAGCATG--GAGGTTGTTTAAATAAGAAT-------AAATGAATTATATACTTTCAGAACTGGAATTGCAATGTGCTTGAGCAAAGAC-----ATCTGCTATTTTTATTTT ....x..x...::x::....:.x..x::-......:x.............-.:.....:.x:x..:.....:............x.......:....x...........:..:...x....x:....:x...-.:.....x:.:..........:.:...x.............:....:.:x.:..........------.x...:.:.:..xxx...:...x.:-------------:....x.:.............:..x.....--xx:...x.:.xxx:.x.x..-------...:x:x.x..:........:..xx...x..x....:xx......:.:...:-----..x::.xx..:....... 28M1I21M1D81M1D62M6I25M13D30M2D20M7D52M5D18M 245/337 72.7% 344/94230402 0.0% 36/337 10.7% 3039724 NA +10842 chr4 + 190214555 18880880 18880879 18881206 327 TCTCAGAGCCAATTTTCAAAAAATTTTACTTTGAAATTTTTATTTGATCAGCAGCCTCAAGATCTGAAGGGGATTACATTTTTCCCCCTTTCTTGTTTCTCAAACTAGCATAAATAATCCTCTTTGTGATAATACCCTGTGTCCCAGAGCACTTGTTTATCATAAGAGGACTCTTGTTTCCA-TGGACTAATGAACTCAGAAGCTTGGCTGACTTTCTGATGCAAATGTCAGACAGGAACCATGTCTTTGC-TTTTCCAGCCAAATTGCTTCGGTTTTACA---------ACACGATGCTTGATTTATAGG----AGTTTTTGAAATATTGAAATTGCCCCC chr4 - 94230402 15824924 15824923 15825253 78405150 78405149 78405479 330 TCTGAGAGCCAAATTTTTA----TTGTACTTGGAAATTTTTATTTGATCAACAGCCTTGAGATTTGAAG---ATTA--TCCACCTCCCTTCCTTGTTTCGAGACCCAGCATAAATAATCCATTTAGCGATAATGCTTCACCTCCCAGTATGTTTGTTTATCATTAATGTTTTCCAGCTTTCAGTGGGCTAGCGCACTCTGATTCCTGGCTGGATTTATGATGTAAATGTCAGACAGGAACTCTGCCCCTCTGTTTTCAAGACAAA--GCTT-ATTTTTACATTGAATCTGACATAATTTATGGAATCTGGGAAAAAATATTGAAAATATTAGAATTGTATCC ...x........x...:x.----..x.....x..................:......::....:.....---....--.::x:.:.....:........xx:.x.:..............x:..x.:......:.:::::x......x::::...........x.:x.xx:..:x.:..:..-...:...::.x....x..xx.:......:x...x.....:.................:x..:.::.x:-.....x..x....--....-:x.......---------...::..x:x..:xx.x.:..----.:.x..x:.......::.....:x:.. 19M4D46M3D4M2D104M1I68M1I13M2D4M1D9M9I21M4I27M 226/315 71.7% 330/94230402 0.0% 27/315 8.6% 3055956 NA +5332 chr4 + 190214555 18891662 18891661 18891858 197 ATATATACATATAGAATAATAAAGTTTCTTATAATAAATTATATGCTTGAAACTTTGAAATAAAGATGAATGAATCCAGTACCAGACTTTTTAATATATTCTTAGTTGAGAAAGAAGTGAATTTTCCTCGCTGCATCAATTTGTCACTTTTGTTGACAGGGTAGGTACAGTAAATTTCCATCCAGAGAGAATCAGTC chr4 - 94230402 15829250 15829249 15829430 78400973 78400972 78401153 181 ACATTCACATATACAAAAATAA------TTACAATCA-TTAAAT---TGAAATGCTAAAATAAAGATGGGTGACTAATTAGCTGGCCTCTCCAATATATTATTTGTTGGAAAGTCA------TTCTCAGGCTGCAGTAATTTGTCACTTGTGTTGACAGATGGAGTGCAACAAATTCTGATCTAGAATGAAACACTC .:..x:.......x..x.....------...:...x.-...x..---.....:x:.:...........::...x.xxxxx:.::.x..:.::........x..x....::..:xx.------..::.xx......x:............x.........:xx::..:..::.....::x...:...:x...x..x.. 22M6D9M1D6M3D69M6D75M 124/181 68.5% 181/94230402 0.0% 16/181 8.8% 3062412 NA +3169 chr4 + 190214555 18949269 18949268 18949349 81 CAATAAGAAATATACCATAGAGACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652060 67652059 67652137 26578266 26578265 26578343 78 CACCAAGAAA---AGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..x:......---.x..x..:..xx:x.....::...x...:...:..xx.x.x.:.:.:...................:. 10M3D68M 56/78 71.8% 78/94230402 0.0% 3/78 3.8% -48702791 -45527611 +3212 chr4 + 190214555 18949300 18949299 18949353 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -48702784 -45527618 +3295 chr4 + 190214555 18949302 18949301 18949355 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -48702782 -45527620 +3070 chr4 + 190214555 18949304 18949303 18949357 54 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -48702780 -45527622 +16912 chr4 + 190214555 18975773 18975772 18976353 581 CTGACTTTAAAATATTC------AAACTACTAATGTAATATGTAGCACCTGCAAA-TACTGTAAACTATTAGCAGGA-TGGTAATGAAAATTGACTGCAAATGTAATGACAACAGGTGAAATTATTCATAGCCTGCTCATGGAGCAAACCTAAGAAATAAACTCAATGGGCATAAATGGAATAAGTTCATGACAAATAGGAAAGTATCCCAAACTGCTAAAGTAATAAAAGCAAATATAATAAATCTTTCCTACAAATATAATAAGGTCCCTAACTGTAAATGTAATAAAACCTATCAACAGCTGCAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTCGAACATATTATATAGCTTTACAAAGAATTATACCCCCTGCTG-GTACAGCCTCAACAATGTCATGCTTTGTCTTTTTCCAGTGAGTCCAAATCTAGCACACTGCATGTTGCCCTGTGTATATTAAGTATGACAGAGTGTTACTATAACCAGGTTTGAACTGAAAATGAAATGCTCAATCCAGATGTGCTCTTTGGCCATTCTGCAAGCAGA-GCCAAAGGCTGCGGATCTCCCACCAGGGGCTGAAATGCTGCCAGGAAAGCTAAGCATGGGAGG chr4 - 94230402 15851974 15851973 15852793 78377610 78377609 78378429 820 CTGACTTCAAACTATGTCTTTAAAAACCAC-AACGTAATATCTAGCACCTGCAAAATATTGTGAAGTATTAGGAACAGTTGTAATGAAAACTGGCTGCAAGCGTCATAACAACAGGTGACATTATTCATAACCTACAGTTGTAACAAGGTTATGATGTAAACTTGGTGATCATAGATGAAATAAGCCAGGTACAAATGTGAAAATATCCTGAATTTTAGAAATAATACAACCAAATATAATAAATCTTGCCTGCAAATGTAATAAGGCTTTTAAGTG-AAATGTAATAAAATCTATCAACAGCTGCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTATATAGCTTTACTATGAATTATACCTCCTGCTGTTTATGGACTCTACAATGTCATGCTTTGTCTTCCTCCAGAAAATCAAGTACTATGAGACTAAGTGTTTTCCAATTTATATCAAATCTGACAGTGTGCTAATACAAAAATGTTGAGGGTGAAAATGAAATTTTGAATCCAGATGTGTTCCCTCGTCATCCCGCTAGCAAAGGGGAAAGGATGTGG-TCTACCACATGTGGCTCAAACACTTCC---TCAGCTAGACAAGGTAGG .......:...x...x:------....:..-..:.......x.............-..:...:..x......x.:x.-.x..........:..:......::..x..:...........x..........:...:.xxx..x.:...:x:..x..x:......:::..:x....:...:......::x:xx......:x....:.....::..:.x:x:..:.....x..x.................x...:.....:........::::...x..-.............:...............:.-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX.................x.x..........:.......-x..::.x...x....................::.....x:.:..x.:xx...xx.x...:x:....x:..x:.x.....:..:.x......x...:..x..:..xx.x...x:::x............x:.x............:..::.x.:...:.:..x....:.-.xx.....x..:..-...x....xx.x....x...::..x..---xx.....::..x..x... 17M6I7M1D24M1I21M1I199M1D31M235I49M1I168M1I14M1D27M3D18M 421/564 74.6% 820/94230402 0.0% 251/575 43.7% 3123799 NA +4551 chr4 + 190214555 18988088 18988087 18988189 102 TTTAGCCTCCCTATAACACTATGACATAGGTA-CTAATAGTGTCTCCATTTTAAAGATGAGGAAACTGAGGCACAGAGAAATAAAGTAACTTGTCAAAGATCT chr4 - 94230402 10729161 10729160 10729263 83501140 83501139 83501242 103 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT .........x.x...x.x..:...x:......-:..x..x::x..........x..:..:.:.............x.x.::.x......:...:.x.:::... 32M1I70M 74/102 72.5% 103/94230402 0.0% 1/102 1.0% 8258927 NA +3136 chr4 + 190214555 18988113 18988112 18988176 64 ATAGGTACTAATAGTGTCTCCATTTTAAAGATGAGGAAACTGAGGCACAGAGAAATAAAGTAAC chr4 - 94230402 73089442 73089441 73089502 21140901 21140900 21140961 61 ATGGGCATTAAT---GTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAAC ..:..:.:....---...:.::....:x....x......x..........x..::....:.... 12M3D49M 47/61 77.0% 61/94230402 0.0% 3/61 4.9% -54101329 -40129073 +10036 chr4 + 190214555 19010779 19010778 19011118 340 TTTTAAGGAGTGACAGCTTGAGATATAGCACATGTGCTTGGAGA---GATTTCCAGGGA----------CAGCAGACTGCATTATTGGCCTTACTGTTTCACAATGCCAAGGCATTATAGGGACATGACTGTTAACAACAGAGTGTGCCATTGTTTTGCTGGTATTTTTTTCTCAAGCCTTTCTGAGTGACAGTCCCTGGGGAGAGTGAATTATCACCCTTAACTTGTAACTTAACTGCTCCTGTTGTCATTCTGCATAATTGCTGTCACCCAGGTAAAACTAAGTTGTTTTTCTCCCTGGTAAATTCTCCCACACTCAGCGTGGAGCCCTTCAGGCAAGGCAGGCAGTAGGG chr4 - 94230402 15868680 15868679 15868998 78361405 78361404 78361723 319 TTCCAATGAATGACAACCTAAGAAGAAGCA-----ATCTGAAGAACAGACACCCAGGAAGTAAAAGAGTATGCGGTTTGTATGATAGACTTCTCTATCTCA----------GCATTATAGAGACGTTACTGCTAA-AATGAAGTCTGCCATTGTTTT--------------CTCATGGCTGAGTGAGTGGCAGACCCTGGGGAGGACGTAGGAGAGTTCTCATCTTGTAACTT---TTCTCCTTTTGTTATTCTGCATAATTGCTGTCACCCAGGTAAAGCTGGCTTGTTTCT-GCCATGGCAAATTCTCTCCCACACAACCCTTTGACCTTCAGGCAGCAAGAGCAGCAGGG ..::..x..:.....:.:.:...x:x....-----:::..:...---..:x:.....:.----------xx..:.x:..:..x..x.:.:.:x..:.:...----------.........:...:.x....:...-..:::...x............--------------....x.x..xxx......:...x..........:::.x.xx.xx:::..:.x..........---.x.....x....:..............................:..::x......:.-x..x...:........:.x...x..:.x:xxx.x..........:x:x::....:.... 30M5D9M3I12M10I32M10D24M1D21M14D62M3D57M1D59M 218/306 71.2% 319/94230402 0.0% 47/306 15.4% 3142099 NA +6989 chr4 + 190214555 19013432 19013431 19013826 395 AGAGTTGCAAATTCCAGCTACATTATTTGAAGGGT-------------TAAAGTCATTGTGAAGAGACTCAGAACAATACACCCCAGTGATCAGTTGGTGGTGAC-ACTGCCACTTTCTCATGGTCTGGACC-GTAGGCACCAGGGT-CAGACATTTTGCA------ATTGCCTTGACGG-TTGCAGGGAGGAGTTA-TGATATTTAACCTAGGACACCAGCCAACAATTATTTATCTGTCAAAACTTTTCAAATATAATTCAGTGTTACTGGGTCCTGCTGAGCCTGAGACTGCCAACCTGTCTGAGTTCCATAAGAAAGATCTTCAGATAATTTCTGTAAAGGCAGACAAGGGCAGCCCCATCACCAAAACTCAGAGGTAAGAAGGGAATA---AAGACAATTTTTAACCACTCTTCTCT chr4 - 94230402 15871441 15871440 15871854 78358549 78358548 78358962 414 AGCATTTAAAGTCCTGGGTATGTCCTTTGAAGGCTGAGTTATTGCAAATGATGTCATTGTGGAAAAG---GGGGCAATTAACTTGGATGATCAGTGGGTAGTGACTATTGCCATTGCTGTATAGTTTGGATTTACAAGCAGCAAGGTTCAAACACTTCACACCCTTCATTGCAGAAATGAACTGTGTAGAGGACTCAGTGGTCTAAAACCCAGTACA--AGCCTACATTTTTCTATCTGTCAAAAGATTTCAGAAGTAATTCATTGTTACAGCTCCCTG--GAGTGAGAGTCTGCTTGTCCATCTGATTTTCCTGACTGAGTGCTTTAAACATTCTCTG-AGGAAAAAACTGTTGTAGTCTTGTTTCCAAAGCATAATAGTGAAGAGGGGAAGTGTGAAACCATTTGGAGTACTTCTTCCCT ..x:..xx..:.:.::.x..::.:x........x.-------------.:.x.........:.:.::---:.::....xx..::x::........x...:.....-.:.....:.x::x:..:..:....::-::.:...x..:...-..:...:..::..------.....xxx:.:.:-:..::x:.....x.:.-..:.x.xx....:..x...--....x...x..x.:............xx.....:.x:.......x......x.xx:....--...:xx...x....:x::.::.....x..:.x.:.xx:..xx...:.:.:.x.:....-.::::x.:..x:xx.:..:.:::.:x.....:.x:.:x:..:.::....:.x:---:.:..x....xx.::xx:.....:.. 35M13I19M3D35M1I26M1I14M1I13M6I13M1I16M1I19M2D60M2D58M1D53M3I26M 238/387 61.5% 414/94230402 0.0% 35/387 9.0% 3141991 NA +3024 chr4 + 190214555 19028502 19028501 19028548 47 TAAAATAAAGCCAAAATTTAAAAAACAAAAAACAAACAAAAAAAAAC chr4 - 94230402 6167110 6167109 6167156 88063247 88063246 88063293 47 TAAAACAACCCTAAAAATTAAAAAACAAAAAACAAAAACAAAAAAAC .....:..xx.:....x...................x.x........ 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 12861392 NA +7203 chr4 + 190214555 19073376 19073375 19073597 222 TGCTTGGTCAACAGGAACTGTTTGCTGCCTTTGGATTTTTCA--------GGTCCCCAAATATGTCTAAGGTAAAAGTTGGCACTGAATTCTAAGCTAGATTTGCCACTT--------------GAGATCCTGGGTGAGATGAAATAATCTGCTAAGATAATAATACTCTCATAATCTCCACTT-ATTAAACTGTCAAGTGTGGCAACAGTCTTTGTTAGCATTTGCTCTTTTTACTTCTTTTCT chr4 - 94230402 15899882 15899881 15900115 78330288 78330287 78330521 234 TGGTAGGTCAACAGGA--------CTGCATTGGCTTGTTTCACGTGTCAGGGTCCC---ATTAACGTAATGTAATAGTTGGCACAGATTTCTGAGCAAGTTTTGTCTATGAAGTAAGAATGAGAGAGAATCTGAGTGGAATATAATACTCTGCTAAAACAATAATACCCTCATAATCTGACCTTCATTAACTTGTCAGGCCTTGTGACAGTCTTTAATAACATTCATTCTTTTTATGTTTTATCT ..x.x...........--------....x..x.xx.x.....--------......---..xx::x...x....x.........x..x....:...x..x....:.xx.x--------------....x:...:...::..:x....x........:.:........:..........xxx...-.....x:.....:.:x.x.::.........:x..:....:::........:x.:..x... 16M8D18M8I6M3D51M14I60M1I60M 156/211 73.9% 234/94230402 0.0% 34/211 16.1% 3173494 NA +7737 chr4 + 190214555 19074498 19074497 19074855 358 CATATTTGGTTCTCTAAGCCTAATTCCTAATAGGCATGGCTAAATCCCACTGAGGATT----TCTGTTC---CTAATAATGCATTAAGCATCTCAGTTGGAAGGTCCCATAAAGCATTTCC--CCCTGCTTTTTTCTCTATCACACTGTGGCGAAAAAGGATTAAA-------------------AAAACACTGCACAGGTGCAACTTGCAGCTGTTGAGGGTAAACTCTGTTCTAGTATATTAATTTATATCCCACCAGGGGAATTGAAGAATAGTTTAGTTCCCATAAAAAGAAAAAAAAAATTGTCTTCATCAAAGAAGAAAGAAATTTCCCATCCAGATTACAAAATTATTCCTGGTCAAAGGGGCCTTTATAAATGCAATT chr4 - 94230402 15901038 15901037 15901407 78328996 78328995 78329365 370 CATTTTTATTCCTTTAACTTTATTCGTTCAGAGGTGTAGTTTCGTTCCTCAAAAAATAAATATCTTTTCAAACCAGTATTACATTATTT-TCTTATTCATTAGGTGTCACTAACCACTTTCTGCCCGTTTGTTTTCCCCAAAACATAGCAATGAAGAAATAATATACAATTCTTAATGATTTTCTGAAATATGGCACAGGTGCAAGCTGCAGCTGTTACGGGTAAACTACATTTTGCTAAACTAATTCAAATCCCACTGGGAAAATAGAAGAATCACTGCATTCCCATAAAAAGAAAAA------TGTTTTCATAGTAGGATACAGAAGTTT-TCATGTACACTCTA--------CCTAGTCAAAAAGTCTTTCGTAAAGAAAATT ...x...:x.:..:...x::..x.:x:.x.x...::.:.:.xx:.:..x.x:.::..x----...x...---.:.:..x.:.....xx:-...:.x.::xx....x:..:x..x..:..:.--...xx:.x.....:.:.xx...:x.::::...:..:x.x..x.-------------------:...:.:x............x:..........:x.........x::..:.:x..x.:.....:.x.......::..::...x.......x::.xx:..................------...:.....x:x..:.x.x....:...-:...x:.x.:.x:.--------...:......::.x.:..::....x:x.... 58M4I7M3I17M1D31M2I43M19I114M6D27M1D14M8D31M 220/342 64.3% 370/94230402 0.0% 44/342 12.9% 3173460 NA +3268 chr4 + 190214555 19075394 19075393 19075447 54 GGAAAGGGAAGGGGAAGGAACGGAAAGAAGGAAGGAAAGGAGGGAGGAGGGAAA chr4 - 94230402 247897 247896 247950 93982453 93982452 93982506 54 GAAAAGGGAAGGAGAAGTTAAGGGAAGAGGAAAAAAAAGGGGGGGGGGGGGAAA .:..........:....xx.x..:....:.:..::.....:...:..:...... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 18827497 NA +3381 chr4 + 190214555 19076241 19076240 19076300 60 AAAATAGAAACAAACAACAACAACAACAAAACAACAACAAAAAAT---------GCTTTCTAGAAAAAG chr4 - 94230402 87321926 87321925 87321994 6908409 6908408 6908477 69 AAAACAAAAACGAACAACAACAACAAAAAAGTAACAGCAAAAAATTGTTAAAAAGCTCTTTAGCAAAGG ....:.:....:..............x...::....:........---------...:.:...x...:. 45M9I15M 49/60 81.7% 69/94230402 0.0% 9/60 15.0% -68245685 -25984717 +3160 chr4 + 190214555 19077831 19077830 19077919 89 CTGATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATTATACT chr4 - 94230402 79867733 79867732 79867821 14362582 14362581 14362670 89 CTGATGCAGTTTTTTATTTCATTTTTTTTGTTTTTGTTGATGTTGTTGTTGCTTTTTGCATTTTTAAGCTCCTTTTTTTTCATCATCCT .....x::x......x...:x........x.....x..xx.x..x..xx.x:.....x:x.....x.x:.::........:..:..x.. 89M 61/89 68.5% 89/94230402 0.0% 0/89 0.0% -60789902 -33440500 +3196 chr4 + 190214555 19077834 19077833 19077909 76 ATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTT chr4 - 94230402 51995573 51995572 51995648 42234755 42234754 42234830 76 ATCTACTTTCCCTGTTTCTTATTAATCTTGCTTCACTTTTTTTTTATTTTTCTTTTTTCTTTAATTACTTTGCTTT ..:.:....:::.x...:..x..xx.:..x:..:x::..............:......:...x...x:...x:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -32917739 -61312663 +3234 chr4 + 190214555 19077835 19077834 19077898 64 TTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTAT chr4 - 94230402 64338720 64338719 64338783 29891620 29891619 29891683 64 TTTGCTTTTCTTTTTTTTTTTACTTTTTCCTTTAAATCTTTTGCATTCTTTTATCCCTCTTTAT .........:...........x:.....::...xxx.:....x:...:....x.:::.:..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -45260885 -48969517 +3092 chr4 + 190214555 19077844 19077843 19077913 70 TTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTAT chr4 - 94230402 88370212 88370211 88370281 5860122 5860121 5860191 70 TCTTTTTTTTTTCCTTTTTTTTGTGTGTGTGTGTGATTTCTCTATCTTTTTTTATACATTTTCTTTTAAT .:..........::........x.x.x.x.x.x.x....:.:.x.:.........x:x....:....x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -69292368 -24938034 +3655 chr4 + 190214555 19077846 19077845 19077920 75 TTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATTATACTC chr4 - 94230402 81777689 81777688 81777763 12452640 12452639 12452714 75 TTGTTTTTTTTTTTTTACATTAAACTCACTCTTATTCCTCCCCTTTTTTCTACTTTTTTTTTTTTCATTGTACTC ..x.............x:x..xxx..:x:.:.....::.::::......:..:............:...:..... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -62699843 -31530559 +3016 chr4 + 190214555 19077854 19077853 19077919 66 TTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATTATACT chr4 - 94230402 21614949 21614948 21615014 72615389 72615388 72615454 66 TTTCTTATTTCTCTTTGCTTTGTTTGTTTGTTTTTTTTTAATTAGTTTTCCATATTCTGTTATACT ...:..x...:.:...x:...x...:...x.........xx...x....::x.x..:.:....... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -2537095 -91693307 +3244 chr4 + 190214555 19086042 19086041 19086107 66 ATACCACACACACACACACACACACACACACACACACACACATACATTATTTAT---TTCAGGATTTTG chr4 - 94230402 44197698 44197697 44197766 50032637 50032636 50032705 69 ATACTACAGATATGTACACATACTAACATACAGACACACGCACACATTATTTATATGTTAGGAATTTTG ....:...x.:.:::.....:..xx...:...x......:..:...........---..x:.:...... 54M3I12M 50/66 75.8% 69/94230402 0.0% 3/66 4.5% -25111656 -69118746 +3061 chr4 + 190214555 19095791 19095790 19095856 66 CAGAGAGAGAGAAAGAAAGAAAACAAAGGAAGAGAAAGAAGAAAGGAAGGGAGGGAAGGAGGGAGG chr4 - 94230402 69066684 69066683 69066749 25163654 25163653 25163719 66 CGGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG .:.:.....:...:..:......x....:.:..x::.x::...:::.......x.::..x...:.. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% -49970893 -44259509 +3587 chr4 + 190214555 19119080 19119079 19119185 106 ATATATATGTGTATATATGTATATGTGTGTATATATATATGTGTACATGTATATATACACACACACACACACCCTATTAGTTCTGCTGTCTAGAGAACCCTGACTA chr4 - 94230402 8395788 8395787 8395884 85834519 85834518 85834615 97 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA---------ATGAATAAAAAACCCAAACTA ..:.:.:.:...:.::..:x.:....:.x..:....:....:x.....xx...:.:.............x..x.x.---------x..xx..:.:.....x:.... 76M9D21M 67/97 69.1% 97/94230402 0.0% 9/97 9.3% 10723292 NA +3776 chr4 + 190214555 19119796 19119795 19119893 98 TGTGTGTATGTGTATATACACATGAATAGACGGATACACACATGCATATGCGTGTGTATATATATATATACACACACACACACATACAGATAGATAGA chr4 - 94230402 8395789 8395788 8395872 85834531 85834530 85834614 84 TGTGTGTATGTGTGCATAAACATGTATT--------------TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA .............::...x.....x..x--------------.:......::..:x..:..xx...:.:.............x.:...:..::...:. 28M14D56M 63/84 75.0% 84/94230402 0.0% 14/84 16.7% 10724007 NA +18105 chr4 + 190214555 19119896 19119895 19120320 425 CTGGCTCTGATTAATATAAAGGTAAAATTGA----GAAAAAACAAGGTAAGATCTTAAAAAGCCCAAGTGTTCTAACTTCTAATTTATATGATGC---TCTCTTCAGTTGTCATTCTTGCACCCTATGTTGACCTGTCAGTGTCACACAGTCATTAAAGTGCAGC-AGTGTTGGTGTAAATTTATAATTGGCGTAATCCTTATTGCTGACATGTCAATATTTAACTTGCATTAACCTTTCCTTCGAGGCTGACAAATTGTGCATCTGTGGCTTGTTCAGTCTAATTTTTCATGTCATTGCCTTGCAAAGCATACAGATTTATAATGTCACCATGTGATGGATGCAGGTCCCTCCTTT-----GCCTTGGAGAAGGGTTTCATCCCACTTAGATTATGCA----TTGGTTTATTTATTTATTTCCAGTTCCACTTACCACCTA chr4 - 94230402 15910630 15910629 15911049 78319354 78319353 78319773 420 CTGACTCCAAGAGATTTGTATGTAGAACTGAACTGGTGTAGCTGAGATCAGAGCTTG----TTCCAAATATCTTGAAT---AATTCCTACAAGGCAAATGCCTTCAGCTGTCAATCT-----ACCAGGCTGACCTGTCAGTGTCACATAATAATTAAACAGCAGCTGGCATTAGTGCAAATTTATAATTGCTATAATCCTTATTGCTGACATGTCAATATTTAACTTGCATTAACCTTTCCTTTGAGGCTTACAAATAGTGCATCTCTGGCTTGTTCAGTCTAATTTTTCATGTCATTTCCTTGCAAGGTACAAAGATTTATAATGTCATCATGTGATTGATACAGACCACTCCTTTTCTTAGCCTTGTAAGATGCACTAACTC----TAGAATA-GCAGTGGTTGGTTTATTTATTTATT-----TTCTACCTGCAAACTA ...:...::.xx:..x.:x.x...:..:...----.x:x.:x::..:.x...x...:----x:....:.:.::.:.x.---....:x..::.x..---.x:......:.....x...-----x.:.x.:..................:.:.x......xx.....-:.::..:...:.............x::..................................................:......x......x........x...............................x........:.:.:.x...............:........x...:...::.x.......-----......x.::.x.xx:.x.::.----....x..-...----..................-----...:..:.:.x.x... 31M4I22M4D17M3D14M3I19M5D43M1I191M5I22M4D7M1D3M4I18M5D16M 315/403 78.2% 420/94230402 0.0% 39/403 9.7% 3209266 NA +3731 chr4 + 190214555 19124721 19124720 19124923 203 GAAAGAGAAAAAGAAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGA-----GAGAAAGAAAATAAAGGAAAGAA-----AGAAAGAAAAAGAAAGAAAGAGAAAGTGGGAGAGAGGAAAGTGGGAAAAAAAGAAGG chr4 - 94230402 60249500 60249499 60249712 33980691 33980690 33980903 213 GAATGGGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAACTTGTCAGAGACCAGCAAAAGGCAAGAAGTGGCAGAAAGCGGGAATGGAAAATATGAATTGGAAGTAGGGGCAATGGAGTCAAGAAATGG ...x.:.:.x.:....:::::::...:x.x.....:......x......x:...xx.....x:...x:..:::.x.xxx:x..:..x:...x:.xx......xxx:..:x:......x.:.:.-----x...:.xx.:xx.....x.....-----......x:::.:x:::...x.x:..x...:..x::..:x.:...::xx..:.:.x.. 123M5I23M5I57M 117/203 57.6% 213/94230402 0.0% 10/203 4.9% -41124779 -53105623 +4619 chr4 + 190214555 19124731 19124730 19124893 163 AAGAAAAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAAAGAGAGAAAGAAAATAAAGGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAAGT chr4 - 94230402 44053977 44053976 44054138 50176265 50176264 50176426 162 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGA-TAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAAT ...::.x.x.x:.::..x::..:..:...:..:......::x...:..:x::...:.x::.xxxx...........::.:.x.....x::.x.x......x........x.:x.x:....x::::::.-x....:.......:.:.:x.:x..:.x.....:. 128M1D34M 98/162 60.5% 162/94230402 0.0% 1/162 0.6% -24929246 -69301156 +3727 chr4 + 190214555 19124762 19124761 19124943 182 AGGAAGGAAGGAAGGAAGGAAGGAAGGAA-----GGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAAAAGAAAGAAA---AGAGAGAAAGAAAATAAAGG-AAAGAAAGAAAGAAAAAGAAAGAAAGAGAAAGTGGGAGAGAGGAAAGTGGGAAAAAAAGAAGGAAGGAAGGCAGGA--AGGAAAG chr4 - 94230402 33149002 33149001 33149194 61081209 61081208 61081401 193 AGAAGTGAGGGCTAGAAGGGAGGAAGGAACTGCTGGAAATGAAAAATAAATTAGTGCAGAATAGAGCAGGTGATGGGAAAGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAACAGAAATAAGATTAGGCAAAGGAAATCTGAGGGGAGAAGAAGGCATAAAAAGAGAATTAGAAAAG ..:.:x..:..xx:.....:.........-----....:x:.:...x...xx.:x.x.:..x...:x:::x..x::.....x.:---..xxx::...:.....:...-....x.:x..::........x::..:x:.:.x.:..x:.::.:..xx..:.:::.:.......x.x:..::x..:.--..:.... 29M5I50M3I20M1I76M2I7M 110/182 60.4% 193/94230402 0.0% 11/182 6.0% -14024240 -80206162 +3855 chr4 + 190214555 19124773 19124772 19124958 186 AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAAGAGAAAGAAAGAA----------AAGAAAGAAAAGAGAGAAA---GAAAATAAAGGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAAGTGGGAGAGAGGAAAGTGGGAAAAAAAGAAGGAAGGAAGGCAGGAAGGAAAGCCGGCCAAGGAAAAA chr4 - 94230402 44053977 44053976 44054157 50176246 50176245 50176426 181 AAGGGATATGTGAAGAATGGAGG--AGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAAC-----------AATGCAAAAGTGGGCGGATAAA-----GGAAGAAAGGAGAGCAGTGAGACAGAAAATCCATCTTGCCAGAAACAAA ....:.x:x:x....:.x...:.--.............:..:.x.:::...x:::..:----------..........::...x...---...x.:....:.x........x-----------..x.x:........x.::x::.-----....:...:..::.x..x:..:...:..:xxx.x.:x....:::.x... 23M2D33M10I19M3I22M11D22M5D49M 111/168 66.1% 181/94230402 0.0% 31/168 18.5% -24929204 -69301198 +3300 chr4 + 190214555 19124841 19124840 19124928 88 AGAGAGAAAGAAAATAAAGGAAAGAAAGAAAGAAAAAGAAAGAAAGAGAAAGTGGGAGAGAGGAAAGTGGGAAAAAAAGAAGGAAGGA chr4 - 94230402 7739259 7739258 7739339 86491064 86491063 86491144 81 AGAGGGAAAAACAG-------AGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAA ....:....:.x.:-------.:.:::.:::......:.............:..x::...:....xx.x.:.......:..::..::. 14M7D67M 55/81 67.9% 81/94230402 0.0% 7/81 8.6% 11385582 NA +3057 chr4 + 190214555 19143021 19143020 19143082 62 CATATATATATATATATATATATATACACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395809 8395808 8395870 85834533 85834532 85834594 62 CATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:...x..:....:...::x..:.:xx.:.................x.....x.::x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 10747212 NA +3333 chr4 + 190214555 19143021 19143020 19143080 60 CATATATATATATATATATATATATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395803 8395802 8395862 85834541 85834540 85834600 60 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....x.:..:...x..:....:...:.x:...:xx.:.................x..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 10747218 NA +3074 chr4 + 190214555 19143022 19143021 19143076 55 ATATATATATATATATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x..:....:...::x....:xx.:.................x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 10747214 NA +3020 chr4 + 190214555 19143024 19143023 19143081 58 ATATATATATATATATATATATACACACACACACACACACACACACACACACACACAT chr4 - 94230402 8395808 8395807 8395865 85834538 85834537 85834595 58 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:..:...x..:....:...::x:...:xx.:.................x.....x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 10747216 NA +3090 chr4 + 190214555 19143303 19143302 19143368 66 TATATACACACATATATATGTGTGTGTGT----GTATTATATATATATGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 25938467 25938466 25938536 68291867 68291866 68291936 70 TATATATAGACATGTAACTGAGTTTGTATTCATGTATTATATATAGGTGTGTGTGTGTGTCTAAGTAGAT ......:.x....:..xx..x..x...:.----............x:.............x.:x...x.. 29M4I37M 52/66 78.8% 70/94230402 0.0% 4/66 6.1% -6795164 -87435238 +3607 chr4 + 190214555 19143313 19143312 19143398 86 CATATATATGTGTGTGTGTGTATTATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982596 70982595 70982681 23247722 23247721 23247807 86 CATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .........:.x.:.x::....x:x.x.x.x:x...........:........:....:.x:...x..:.:.:.::...:.:.:.. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% -51839283 -42391119 +3010 chr4 + 190214555 19143316 19143315 19143364 49 ATATATGTGTGTGTGTGTATTATATATATATGTGTGTGTGTGTGTGTGT chr4 - 94230402 42192943 42192942 42192991 52037412 52037411 52037460 49 ACATATCTGTCCATATGTATTACATATATGTGTGTGTGTGTGTATACGT .:....x...x::.:.......:......:.............:.::.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -23049627 -71180775 +3043 chr4 + 190214555 19143321 19143320 19143365 45 TGTGTGTGTGTGTATTATATATATATGTGTGTGTGTGTGTGTGTA chr4 - 94230402 46964825 46964824 46964869 47265534 47265533 47265578 45 TGTGTGTGTGTGTAGGACATATATATATATATATATGTGTGTGTA ..............xx.:........:.:.:.:.:.......... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -27821504 -66408898 +3124 chr4 + 190214555 19143329 19143328 19143390 62 TGTGTATTATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACC-TATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ......::-....:..:x....x.....::...:.......:.......:.x......x:.. 8M1D53M 47/61 77.0% 61/94230402 0.0% 1/61 1.6% -13816239 -80414163 +3135 chr4 + 190214555 19143333 19143332 19143367 35 TATTATATATATATGTGTGTGTGTGTGTGTGTATA chr4 - 94230402 27034823 27034822 27034857 67195546 67195545 67195580 35 TATTATATATATATGTGTGTGTGTGTGTGTATATA ..............................:.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -7891490 -86338912 +3185 chr4 + 190214555 19147686 19147685 19147754 69 CATGCATGCATATATATACACCCGCACATACATCTCTATATGTGTCTGTGTGTATGAATATATATGTGT chr4 - 94230402 71630137 71630136 71630205 22600198 22600197 22600266 69 CGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .:............:.:....xx::.:.:.:..:.:.:....::.x...x..:...x:x....:..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% -52482451 -41747951 +7371 chr4 + 190214555 19185445 19185444 19185656 212 TGGAACAACAGTCAAGTAT--CCTCAATGCGTGGCCACTGGGTTTACTTTCTATTGCTTTTATGGGTTTACATATAAT-----TCTTTTGCTAACTACAGGATAT-TTTCTTTAATCTATTTGATTAAGCAAGCCAGGAATTAGAACGAAAGATAATGTTTTCTAAATTCCTTTCTGATGAATAATAAATGTCACTAAGGAATTAGATAGTAGGAGGTAG chr4 - 94230402 15933275 15933274 15933479 78296924 78296923 78297128 205 TGGCAGAACAGTTCACCTTTGCCCCACTGGGTGGCCCCTATGCTATGCTTTTATATCTTTTATGTCTTCAAACATCCTCTACATCTTTT------------ATGTCTTTCTTTAATTTATATAATTACCCAAACCAGGAGTTGGAA---AAGATAATATTTTTTAACTTCTTTTCTGATGAATAATGGATGTCATGTAGGAATTAGAAAGTAGGATGTAG ...x.x......:x.x:x.--..:..x..x......x..:x.:.xxx:..:...xx........xx..:.x.:..xx.-----......------------..:.-..........:...x.:....xx...:......:..:...---........:....:...x...:...............::......:xx..........x.......x.... 19M2I57M5I6M12D4M1I40M3D71M 149/197 75.6% 205/94230402 0.0% 23/197 11.7% 3252170 NA +12144 chr4 + 190214555 19185445 19185444 19185788 344 TGGAACAACAGTCAAGTAT--CCTCAATGCGTGGCCACTGGGTTTACTTTCTATTGCTTTTATGGGTTTACATATAATTCTTTTGCTAACTACAGGATATTTTCTTTAATCTATTTGATTAAGCAAGCCAGGAATTAGAACGAAAGATAATGTTTTCTAAATTCCTTTCTGATGAATAATAAATGTCACTAAGGAATTAGATAGTAGGAGGTAGTTGCCTGGGCCATCTGCTGCATATGGGAACAG-AGAAAGATATTAAACTTTAAATTAGGTATTGCTTCACAGAACCTAGAAGATGAAAGGAAATACACACTAA--ACTGGAAGATAATCATCAATTCTTATCAGT chr4 - 94230402 15933614 15933613 15933948 78296455 78296454 78296789 335 TGGCAGAACAGTTCACCTTTGCCCCACTGGGTGGCCCCTATGCTATGCTTTTATATCTTTTATGTCTTCAAAGAAAATG---TTGCTTAAGGCA--ACATTTTCTTTAATTTATATAATTACCCAAACCAGGAGTTGGAA---AAGATAATATTTTTTAACTTCTTTTCTGATGAATAATGGATGTCATGTAGGAATTAGAAAGTAGGATGTAGTCATGTAG--CATCTGCTGCATGTAGGAACAGAAGAAAGATGTTAGACTTGAAATTGGGGTTTGATTCATATTAACTCAAAGCTGAAAGTAAAC-CACACTGGTCACTTGGAAATACCAGTC---TCTTAACAGT ...x.x......:x.x:x.--..:..x..x......x..:x.:.xxx:..:...xx........xx..:.x.x.x...x---.....x.xx:..--.:............:...x.:....xx...:......:..:...---........:....:...x...:...............::......:xx..........x.......x.....:::x.:.--............:.:.......-........:...:....x.....:..xx...x....:.xx.x..x:...x......x...:-......::--...x.:.:...x:x:..---.....x.... 19M2I58M3D12M2D44M3D79M2D22M1I61M1D8M2I17M3D10M 245/330 74.2% 335/94230402 0.0% 19/330 5.8% 3251831 NA +3570 chr4 + 190214555 19186399 19186398 19186477 79 TTGGACAAGTTACTTAATTTCCTCAAATCTCAATTTATTCTTCTTTAAAATGGATAAATATTCTTACTTTCACCAAGTA chr4 - 94230402 33706957 33706956 33707035 60523368 60523367 60523446 79 TTGGACAAGTCACTTAGTTTCCTGGTATCTTCATTTGTTCTCCAGTAAAATTAAGAGTCATACTTACTTACTTCATGTA ..........:.....:......x:x....:x....:....:.xx......x:.x.:x:..x.......x.x:..x... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -14520558 -79709844 +3461 chr4 + 190214555 19226255 19226254 19226403 149 ATATATAATGTATATAATATATTAT-----ATATAATGTATATAATATATTATATATAATGTATATAATATATTATATATA-ACGTATATTATAT--------ATTATATAT-AATGTAT-ATTATATATAAAATATTATATTTATATATAATATA-TACATTATA chr4 - 94230402 67910065 67910064 67910224 26320179 26320178 26320338 160 ATATACAATACTAAAAATATACTATTAGATACATAATA-----AATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATAT-TTTATTAATGACACACTACATTACA .....:...::xx.x......:...-----.:.....:-----........:......:.:..........:.x:......-.:..:x:x..x..--------....x....-..::.x.-.x..:......:.x.x...-.....xx..:.:.:.-.......:. 25M5I8M5D38M1I13M8I9M1I7M1I19M1D15M1I9M 107/143 74.8% 160/94230402 0.0% 23/143 16.1% -48683810 -45546592 +3860 chr4 + 190214555 19226460 19226459 19226586 127 CACATTATATATAATGTATAATG-----TATACATTATATATTATATATAATGTATATTGTATAC-ATTACATATATGTAATATATATAATATATATTATATATAATATATATTACATATATGTAATATATAT chr4 - 94230402 67910022 67910021 67910154 26320249 26320248 26320381 133 CATACTAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAAT ..:.:..x.x.x:..x.:.....-----.::x..:.x...xx:.....:...::xx.xx:.....-....x...:..:xx.x......x:......x............:..x..:...:....:.x...x.. 23M5I37M1I67M 87/127 68.5% 133/94230402 0.0% 6/127 4.7% -48683562 -45546840 +3588 chr4 + 190214555 19226483 19226482 19226589 107 TATACATTATATATTATATATAATGTATATTGTATACATTACATATATGTAATATATATAATATATATT---ATATATAATATATATTACATATATGTAATATATATAAT chr4 - 94230402 62168896 62168895 62169004 32061399 32061398 32061507 109 TATACACTGTATATTATGTATAACATACACTGAGTATAACATATATATGTATAATATGCACTGTTTATTTAAAAAAATGATACATGAAACAAGATTGTAAT-TAAATAAT ......:.:........:.....::..:.:..x:..:.x:.:.........xx....::.x.:.x....---.x.x..:...:..:xx...x:xx......-..x..... 69M3I29M1D8M 74/106 69.8% 109/94230402 0.0% 4/106 3.8% -42942413 -51287989 +3973 chr4 + 190214555 19226564 19226563 19226704 141 TATTACATATATGTAATATATATAATATATTATATATATTATATATATTATATATATATTATATATTATATATATATTATATATATTATATATATATTATATATATTATATATTACATATATAT-ATAATTTATATATATAT chr4 - 94230402 67910059 67910058 67910189 26320214 26320213 26320344 131 TATTACATATAC--AATACTAAAAATATACTAT------TAGATACATAATAAATATATTGTATATAGTATATATA--ATATGTAGTATATACATGTGAGATAAATT-TAAGCTGATTAAATATCAACATTTGAATACATAT ...........:--....:xx.x......:...------..x...:..x...x.......:.....x:........--....:..x......:..:.x.x...x...-..x::.:xx..x....-.xx....:x...:.... 12M2D19M6D37M2D29M1D16M1I17M 98/130 75.4% 131/94230402 0.0% 12/130 9.2% -48683495 -45546907 +18636 chr4 + 190214555 19227791 19227790 19228264 474 AGGCAATTTTATTGAAATGAACATAAAAGCAGCATCAAAACAACGTG----GTTGCCATATAACTACCAACCAGTTTGAAGCCAGCTTAACTCTTTTTGTTAGGAATATGAATAATGTACA-AAGAATTCCGCAAAAGAAAAATGAAAAAAAAAGTACCTCGAGGGTAGAAAACTGATGCTAATCATAGCATTGTTTTTTCATGAAAATAAGGCATGCTTTGAAGTATTTTTGCTACTTCCCTTCTATTCCCTTGGTTAAATGTTGTTTTCATAATGTTTACACAGTTAACCTCGGTACTTTTAGTACTTATCTAGTCTTGATGCTTTCTCAAAAGCCCTCTCCTT-------ATTTGATTCATGAACTTCGGCTTTCTTAAATTGATTTATATTTCTGTCAAAAATGATTTCATAGTTTAATGCACTGTCCAAAATCCATTTCTTATGGCATGCCTATTGCTTTAGAAAAGTTCATTTTATGTGC chr4 - 94230402 15963078 15963077 15963536 78266867 78266866 78267325 459 AGACCACTTTAATGAAA-GAATGCAAA-GCAGAAGCAAAGCAGCTCTTTCTGTTGCTACCCTACTACCAATCGTAATGGAGCCAACATGGCTTTTTATGCTAAGAATATGAATAATGTACACAAGAATTTT------------------AAAAAATACCTTTAGGCTAGAAAACTGAGACTAATCATGGTATTGTTTTT-CATGAAAATAAGACTTCCTTTGAAGTATTTATGCTACTTCCTTACTATTCCCTTGGCCATATTTTGTTTTCATAATGTTTATTCAGTTAACTTAGTTGTTTTT-GTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGATT--TATCTCTGTCAAAAACTGCTTCATAGTGCAAGGCATCGGACATAA---ATCCCTTATGGTATGTCTTTTGCTGCAGAGAAATATGCTTCACATGC ..:.x.:....x.....-...:::...-....x.x....:..:.x:x----.....:.:x:x........:.:xxx..:.....:.x.::..:...x..:..:..................-.......::------------------.....:.....:x...x...........x:........:.:.........-............:.x.x.............x..........:.x............::.x..x..................:x........:.x.x.::....-..........:.....:..:.......xxxxx.:....::.:-------....xx..:x.x..::.:x.:.......:::.....--...:...........:x::........x:..x...::.xx..x..---..::.......:...:..x.....x:...:..:.x:::..:.::... 17M1D9M1D19M4I70M1I9M18D50M1D103M1D42M7I36M2D45M3D47M 333/447 74.5% 459/94230402 0.0% 39/447 8.7% 3264713 NA +3320 chr4 + 190214555 19230685 19230684 19230736 52 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACACACACATATATTTT chr4 - 94230402 25393262 25393261 25393313 68837090 68837089 68837141 52 TGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCT ....::.....:...:...:.x........:..........:..:.::..:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -6162577 -88067825 +3428 chr4 + 190214555 19230685 19230684 19230738 54 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACACACACACATATATTTTCT chr4 - 94230402 25393260 25393259 25393313 68837090 68837089 68837143 54 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCT ......::.....:...:...:.x.....:.............::.:.:x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -6162575 -88067827 +3062 chr4 + 190214555 19233287 19233286 19233369 83 AAAAAAATAAAATGAAGGGAACAAAAGAAAGAAAAATAAAGAAAGAAAGAAGGAAAGGAAGGAAGAAAGAAAGAAAAAGAAAA chr4 - 94230402 32638714 32638713 32638796 61591607 61591606 61591689 83 AAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAA ..::...x:...::......x..:x:..x.:.xx:.:..:....:.x...x..:..xxxx.......:.:......:.:.... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -13405427 -80824975 +3062 chr4 + 190214555 19233287 19233286 19233369 83 AAAAAAATAAAATGAAGGGAACAAAAGAAAGAAAAATAAAGAAAGAAAGAAGGAAAGGAAGGAAGAAAGAAAGAAAAAGAAAA chr4 - 94230402 32636751 32636750 32636833 61593570 61593569 61593652 83 AAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAA ..::...x:...::......x..:x:..x.:.xx:.:..:....:.x...x..:..xxxx.......:.:......:.:.... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -13403464 -80826938 +3163 chr4 + 190214555 19233318 19233317 19233429 112 AAAAATAAAGAAAGAAAGAAGGAAAGGAAGGAAGAAAGAAAGAAAAAGAAA------AAGAAAAAGA--AAGAGGGAAGAAGGAAGGAAGGAAGCAAGGA---AGGAAGGGAGGGAGGAAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.x....:.........:::.:..:..::.:.:.xx:x.......x..------....x.....--:.:.x:......x..:.:..::...x:.::.---x....:....:.:::x.... 51M6I10M2I31M3I20M 74/112 66.1% 123/94230402 0.0% 11/112 9.8% -11299846 -82930556 +3097 chr4 + 190214555 19233321 19233320 19233379 59 AATAAAGAAAGAAAGAAGGAAAGGAAGGAAGAAAGAAAGAAAAAGAAAAAGAAAAAGAA chr4 - 94230402 19799664 19799663 19799722 74430681 74430680 74430739 59 AATTGGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA ...x:::..:....::..:x.:......::..::.:.........:....:......:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% -566343 -93664059 +3245 chr4 + 190214555 19233330 19233329 19233401 72 AGAAAGAAGGAA-AGGAAGGAAGAAAGAAAGAAAAAGAAAAAGAAAAAGAAAGAGGGAAGAAGGAAGGAAGGA chr4 - 94230402 56098454 56098453 56098526 38131877 38131876 38131949 73 AAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGA .:.x........-..::..xx.:....x.:...:..:......:.....x.......::...::...xx.:.. 12M1I60M 52/72 72.2% 73/94230402 0.0% 1/72 1.4% -36865124 -57365278 +3097 chr4 + 190214555 19264651 19264650 19264736 86 TTCCTTTTTTTCT-TTTCTTTTCTTTCTTTCCTTTCCTTTCTTTTTCCTTCCTTCTTTCTTCCTTCTTTCTTTTTTCTTCCTTCCTT chr4 - 94230402 24861593 24861592 24861679 69368724 69368723 69368810 87 TTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTT ..:....x.::..-.x..x..........:...::x.:x.::.:::....:.:...:.:...::.:......:x...x...xx.:.. 13M1I73M 56/86 65.1% 87/94230402 0.0% 1/86 1.2% -5596942 -88633460 +3134 chr4 + 190214555 19297442 19297441 19297492 51 TCTTCCGTTTTCAGGAAAAAAAAAAAAAAAAAAAAAAAAAGACAGTCCTAA chr4 - 94230402 56661897 56661896 56661947 37568456 37568455 37568506 51 TCTTTTTTTTTTAGGACAAATAAAAAAAAAAAAAAAAGAGGTCAGTTCTAA ....::x....:....x...x................:.:.x....:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -37364455 -56865947 +7354 chr4 + 190214555 19300228 19300227 19300473 246 TAACATAAAGTATATAATATCTTTTCAAAATAAGGAAGAGAGATATTGTTACTGAGAATAAACAGTAAAGAAAGGAGAATCGGTAACTGAAAATTTAAACTTTTAAGGATGAAGAGGGTGAGCCATCTGGATTTAATCAGCATAAATCTATAGCTTGCATTAGCTCCACAATTAAGACACTCATAAAAATCCACTGTGTGAGTAAGAGCTTTCCTGAATCATAATTTAACCATGATACTCTATCAA chr4 - 94230402 15985557 15985556 15985784 78244619 78244618 78244846 228 TAAAGCAAAACATGGAATATTCTTTTGAAAGAAGAAATGATTAAACCA--ACTTGGTTTAAA-----AAAAAAAGAGTGCCACTAGCTGACAATTTAAA--------GATCAAGAGACTAAGACATCTGGTTTCAATCTCTGCATATCCATCACCTGCATTCGCTACACAATTAAGAGCCTCATAAAGATGTACTGTGTG---AAGAGCTTTTCAGTTTCATAATTCAGAAATAATACCTCATAAA ...x::...::..:x.....::...::...x...:..x::xx.x.:::--...x:.xx....-----..:...:...x::.:x..:....x........--------...x.....:x.:..x.......x..:....xx:::.x...:..x:.:......x...x...........xx........:..x:........---.........:.x.xx........:.:xx..:....:::..x.. 48M2D12M5D32M8D93M3D43M 156/228 68.4% 228/94230402 0.0% 18/228 7.9% 3314671 NA +3565 chr4 + 190214555 19302862 19302861 19302928 67 ACACACATACATTATGTATATACACACACATATGTATATAAACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTT-TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x...::..-..::.:.:.....:::..........x.xx........::............. 13M1D53M 51/66 77.3% 66/94230402 0.0% 1/66 1.5% 4338043 NA +3078 chr4 + 190214555 19302874 19302873 19302932 59 TATGTATATACACACACATATGTATATAAACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:::::::....::.....:..x.:...xx........::............. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 4338048 NA +3142 chr4 + 190214555 19302874 19302873 19302954 81 TATGTATATACACACACATATGTATATAAACACACACACACACACACACACACACACACACACACATATATATATATCTCA chr4 - 94230402 8395799 8395798 8395879 85834524 85834523 85834604 81 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA .:..:...x...:::.:x..::...:..x:.x:...:xx.:.................x.....x..:x...x.x.x.:.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 10907075 NA +3302 chr4 + 190214555 19302874 19302873 19302988 115 TATGTATATACACACACATATGTATATAAACACACACACACACACACACACACACACACACACACATATATATATATCTCACTGAATATACCCTGGAGTATCAGATTGAAGTTGA chr4 - 94230402 8395797 8395796 8395911 85834492 85834491 85834606 115 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTATTAA .:...::...x...:::..x.::....:x.::.x:...:xx.:.................x.....x..:x...x.xxx.x.x:.x..:.::....x:x..x..:.x.:x:..:. 115M 70/115 60.9% 115/94230402 0.0% 0/115 0.0% 10907077 NA +3095 chr4 + 190214555 19302875 19302874 19302927 53 ATGTATATACACACACATATGTATATAAACACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ......x....:.:::..::x..:..x..:.................x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 10907065 NA +3040 chr4 + 190214555 19302881 19302880 19302950 70 ATACACACACATATGTATATAAACACACACACACACACACACACACACACACACACACATATATATATAT chr4 - 94230402 89016082 89016081 89016151 5214252 5214251 5214321 70 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGT ..:::.......x..:..::.x......::x::.:........::..x.::..:....:..x..:.:.:. 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% -69713201 -24517201 +12558 chr4 + 190214555 19309446 19309445 19309763 318 AACCACTTAGAGCTTT-CTGGGTAGAGT--AACTGTTACCACTTGAGGGCATCCTGTCATTATGTTCTGTAATAGTCCTGAACTTCTAAATTCACCTCAAAACCATGGCTCTCTGACAGAAGAGACTAAGAAAAAGAGAGAAAAAGATCTTTGCCGGAAATGCTGAGGCAGCAATGAAAATGATAATTTACCATGCTAAATTGGTGTTTCCTGGAGTACTAGGTCAGTGAAGACTGTATTTCAGGAAATGCTAAGTCAACAGAAGAGGATAAGTGACACAGATAGAAGTTGATGGAATCTTCCTGGCAGGGACCAAAATAG chr4 - 94230402 15989806 15989805 15990104 78240299 78240298 78240597 299 AACCACTTAAATTTTTACTGGGTGGAGTTTATATTTTGCCACTTGAGGGCATCCTGTCATTATGTTCTGTAATAGAGCAACATGTCTACATTC-CATAAAAATAATGGACTTCTGCTGAAAGAGT--------------------GGTATTTGCCCAAAGTGCTGATGAAGCAATGGAAGTCATAATTTACCATACAAAACAGGCATTTCCAAGAGCA-TAGGTCAAAAAGGATTGAATTTCAGGAAATGCTAAGTCAACAGAGAACGAAAAGTATCACAGATGCAAGAAGATGGACCTTGCTTTGCAGATGCCAGCACAG .........:.x:...-......:....--.xx.x..:.....................................xx.x:x.:x....x....-.x.x....:x....x::....x:::.....x--------------------.:.x......x:..:......x.x.......:..:.x............:.x...:x..::.....x:...:.-.......:x:.:..:..x..........................::.x..x....:x.......:x...xx......x::.x.:.x....:x:...:x.:.. 16M1I11M2I63M1D31M20D73M1D102M 221/296 74.7% 299/94230402 0.0% 25/296 8.4% 3319640 NA +3111 chr4 + 190214555 19320020 19320019 19320060 41 TTTTTTGTTTGTTTTTTGTTTTGTTTTTGTTGGGGGGGTGG chr4 - 94230402 94106364 94106363 94106404 123999 123998 124039 41 TTTTTTGTTTGCTGTTTGTTTGGTTTTTTTTGGGGGGGTGG ...........:.x.......x......x............ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -74786344 -19444058 +3043 chr4 + 190214555 19333249 19333248 19333291 43 TCTCAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437735 69437734 69437777 24792626 24792625 24792668 43 TTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT .:.x.........x........:x................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -50104486 -44125916 +3549 chr4 + 190214555 19373051 19373050 19373153 103 CAATTCTCCTAATAAACTCCCCTTCTCCCATATGTG------------------TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959508 32959507 32959628 61270775 61270774 61270895 121 CATTTCTCCAAATATACTGCTGTTCTCTCATTCCTGCTGAATGCACCATTTTGCTGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ..x......x....x...x.:x.....:...x:x..------------------..::xx.....::x.:.:::..x....x.....::...:.......:.......:.x......x:.. 36M18I67M 72/103 69.9% 121/94230402 0.0% 18/103 17.5% -13586457 -80643945 +3036 chr4 + 190214555 19373107 19373106 19373146 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -70448175 -23782227 +6734 chr4 + 190214555 19400313 19400312 19400566 254 GAACTATAAAACGTAAATTAGTTTAATCAGTACACTCAATGGACTAATTAGTTATAGATACTTTCAGGACATTTAAAACTAAAAATACTACAACTAAAAAAGTGAATATACTATAAATTATATTCGAGGACTGTTATTAAAGGAAATAAAAGCTCTTTAAAATAAACAGACTCTTTGGCAGTTGAAACACATGGGTTTCATCTTAAATTACTATTTGGTTTAACCGAATTAATTTTTCCAAGTAAAATAATGAC chr4 - 94230402 16013141 16013140 16013364 78217039 78217038 78217262 224 GACCTATGTAATATAAATAAATTTAATCAATAATCTCAGATGACTAATTAGTTGAAGATAACT--AGGATATTT----CTAGAACCA-TACAATTAAGAT-GTGAATTTTCTACAGAA-ATACCCCATGATTGTTATCAAAGGAAATATAAGCCACTTTAAATAAATAAAGTTTCTGGCAGTT-CTATACATGAA---CATCT----ATAATATATGAT-------------GTTTTCCTGGTAAAATAATAAC ..x....:x..::.....x.:........:..xx....:xx............:x.....x:.--....:....----...:..x:.-.....:...:.x-......x.x...:.:.x-...::.x.x..:......:..........x....:x:..x.......:.:.x.:.:........-xx.:.....::---.....----x..x...x..:.-------------x......x:..........:.. 63M2D9M4D9M1D12M1D17M1D64M1D11M3D5M4D12M13D22M 166/224 74.1% 224/94230402 0.0% 30/224 13.4% 3387172 NA +3198 chr4 + 190214555 19410922 19410921 19410976 55 GTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAGAGAGAGAGACA chr4 - 94230402 33398821 33398820 33398875 60831528 60831527 60831582 55 GTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATA .....:........:.:::::.:....x.x.............x.....x...:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -13987899 -80242503 +3171 chr4 + 190214555 19411544 19411543 19411633 90 ACAAAAGTTTTTCTTT-----TATTATTTTGTGGGGTTTTTTTTTTTTTGCTTTGTATATTTAAATACTTTTCTATTGTTTAGGTTACTCTAACA chr4 - 94230402 61035871 61035870 61035965 33194438 33194437 33194532 95 ACAAAAATTTAATTTTGTTGGTACTATTTTGTTGGCCTTTTAATTTTTTGTTCTGTATAATTAAATGACTTTTGCTTCTATGGATTTCACTAGTA ......:...xx:...-----..:........x..x:....xx.......:.:......x......:x:...:xx..x.x.:.:..x.x...::. 16M5I74M 63/90 70.0% 95/94230402 0.0% 5/90 5.6% -41624327 -52606075 +10010 chr4 + 190214555 19412346 19412345 19412596 251 TGATCACCAAATTCACAATCCCATAGGGATAATATTTATTATCATAAAATGTACTATAGCATTTGAAATCTGAGGTTAAACATTTTACTGCAAGGTTTATGAGGAGACTGTGAATCTCAAGCGAATTCATTGCATGAGAAAAGTGAATTTATTATCAAGGGCATGAAAAGAATCAGTCTTCTGAATGCTTAA------TACATTCTGT---TAAA------ACATGTTATTCCAAAATCCACAATGCAAGATGTGTCTAACCTCTA chr4 - 94230402 16015805 16015804 16016060 78214343 78214342 78214598 256 TGATCACCATATTCACAGTCCCTTTGGGACAACATTTATTATTACAAAAAGTATCACAGCATTTGAAATCAGAAG-TAAAAAATTTATTACAGGGTTTATGAGGAGAATATGAATCTCTCGTGAATACAGTACATT-GAAAAGTGAATTTATTATAAACTTTAT--AAAGAAGTACTCTTCTGAATACTGAAAACTGTTATGTCTTGTAAGTAAACTTTTCACAAGAAATTCCCAAATCTGGAGATCAAGGTG------ACCTCTA .........x.......:....x.x....:..:.........:.:....x...::.:.............x..:.-....x.x....:.:..:..............x.:........xx.:....x..x.:...x-..................x..xxx:..--......x:.x..........:..x..------..::.::...---....------...x.xx.....x.....::x.:xx....:..------....... 75M1D60M1D27M2D26M6I10M3I4M6I32M6D7M 188/241 78.0% 256/94230402 0.0% 25/241 10.4% 3396541 NA +3231 chr4 + 190214555 19422789 19422788 19422936 148 ATAATGGAAAAAATGGATTATAAAGTATATGTGTGCAGAGAGAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAGGGA chr4 - 94230402 61334666 61334665 61334801 32895602 32895601 32895737 136 ATGTTAGCACAAATGTATAAGGAAATATGTG------------AACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ..:x.:.x.x.....x..x.x:..:...:..------------..xx......:....:x..:...x.:x:..:....:x::::...x.xx::x.::.xx.:x.:....x.x......x.:x.....::..x..:.......::.:.. 31M12D105M 83/136 61.0% 136/94230402 0.0% 12/136 8.8% -41911877 -52318525 +3057 chr4 + 190214555 19422850 19422849 19422911 62 AGGAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAGAGAGAGAAAGGAA chr4 - 94230402 42895016 42895015 42895077 51335326 51335325 51335387 62 AGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAA .....:..........:.......:..x.....:...:x:....xx:x....:.xx.:.:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -23472166 -70758236 +3160 chr4 + 190214555 19422919 19422918 19422977 59 AAAGAAAGAAAGGAGGGAGGGGGAGGGAGGAAAGAAGGAAAAAAGGAAAGAAGTAAGAA chr4 - 94230402 77186078 77186077 77186136 17044267 17044266 17044325 59 AAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA .........x:..:...:.....::..:..:......:...:..::.:.:.x::..:.. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% -57763159 -36467243 +3017 chr4 + 190214555 19457079 19457078 19457130 52 TCCGTCTGGAAAAAAAAAAAAAAAAAAAAAAGCTTTCATTCAGCTCTGACAT chr4 - 94230402 39597606 39597605 39597657 54632746 54632745 54632797 52 TCTGCCAAGTCAAGGAAAAAAAAAAAAAGGAGTTTTCATTCAGCTCTGTCAT ..:.:.x:.xx..::.............::..:...............x... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -20140527 -74089875 +3488 chr4 + 190214555 19463770 19463769 19463847 78 AATAATAAATATA-TATATATCACATAT--AAATACATATATATGTATATATACATTTATATGTACATGTATATGTGTGTG chr4 - 94230402 37291740 37291739 37291820 56938583 56938582 56938663 81 AATAATGAATACAGTATCTGTTATATATTTGAATACATATAAAAGCATATATTCATTTATATTTTAATATATCTATGTGTG ......:....:.-...x.:.:.:....--:..........x.x.:......x.........x.xx..:...x.:...... 13M1I14M2I51M 61/78 78.2% 81/94230402 0.0% 3/78 3.8% -17827970 -76402432 +3662 chr4 + 190214555 19467613 19467612 19467770 158 AATTAAACATTTCAAATTTACAGAGTACACACACACATAAATTATGTATTCACATGC-----CCCATGCATCA---CAAATATTTGTGTGTGTGTGTGTATATATATATATATATATTTAATATGCATATATAGTTGTATGTGTATTTATATTACACACAAAAATA chr4 - 94230402 40224601 40224600 40224758 54005645 54005644 54005802 158 AATTAAACACA-CAAACT-----AGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATT--CATTACACACATAAGTA .........:x-....:.-----..:...:::.:.x.xxx.x..:x...x..:...:-----::::....x..---..:..x.:.............:.:........x...:....x.:x.xx::...xx.x....xx.x..:...--:..........x..:.. 11M1D6M5D34M5I11M3I71M2D17M 103/150 68.7% 158/94230402 0.0% 16/150 10.7% -20756988 -73473414 +3673 chr4 + 190214555 19467687 19467686 19467757 71 TTTGTGTGTGTGTGTGTATATATATATATATATATTTAATATGCATATATAGTTGTATGTGTATTTATATT chr4 - 94230402 19559294 19559293 19559363 74671040 74671039 74671109 70 TTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtg-gtgggttcacact ................................:.x:....x.x::.....xx....:-...x:..:.:.:. 57M1D13M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% -91607 -94138795 +3146 chr4 + 190214555 19467689 19467688 19467726 38 TGTGTGTGTGTGTGTATATATATATATATATATTTAAT chr4 - 94230402 52579775 52579774 52579812 41650591 41650590 41650628 38 TACGTGTGTGTGTGTATATATATATATATATGTTTAAT .::............................:...... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -33112086 -61118316 +3260 chr4 + 190214555 19481004 19481003 19481070 67 CTACCTTCCTTCCTTCCTTCCTTCTCTTTCCCTTCCTCCCTTTCTTCTTTCCTTTATGCCTGTCATA chr4 - 94230402 68014329 68014328 68014395 26216008 26216007 26216074 67 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATTATA ..:.....:::...:..:x......:......:...:.x.......:..:::.:.x.xx..:.:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -48533325 -45697077 +3404 chr4 + 190214555 19519776 19519775 19519910 135 TATACATATATGTATATACATACATACATACATACATACATACACACGTACATACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACAC-----ACGTACATACATACACAC chr4 - 94230402 89016083 89016082 89016222 5214181 5214180 5214320 140 TGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC .:.:..:.:..x.::..:..:...:..:.x::::..:...:.::..x:.:......:::.x.:..:::.:..x....x:.::..:....:x:.:.:.:.x:.::x:.::..x.:...-----x:..:.x:.:..x..... 117M5I18M 74/135 54.8% 140/94230402 0.0% 5/135 3.7% -69496307 -24734095 +3372 chr4 + 190214555 19519791 19519790 19519908 118 ATACATACATACATACATACATACATACACACGTACATACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..::::...:.:x.:...:..:...:..::x:.::..:...:.::..x:.:......:::.x.:..:::.:..x..::x::::..:....:x:.:.:.:.x..:.x:..:..x.:... 118M 63/118 53.4% 118/94230402 0.0% 0/118 0.0% -69496291 -24734111 +3177 chr4 + 190214555 19519793 19519792 19519860 68 ACATACATACATACATACATACATACACACGTACATACATACACACGTACATACATACACACGTACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:.:.x..:......x.::..:.........:.::..:.:.x...::...x...::..:....:x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 11923380 NA +3236 chr4 + 190214555 19519811 19519810 19519936 126 ATACATACACACGTACATACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACAC--------ATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..::::.....:x.:...:..:........x::::..:....--------.::..x:.:......:::.x.:..:::.:..x..::x::::..:....:x:.:.:.:.x..:.x:..:..x.:... 42M8D76M 67/118 56.8% 118/94230402 0.0% 8/118 6.8% -69496271 -24734131 +3295 chr4 + 190214555 19519836 19519835 19519904 69 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 11923424 NA +3137 chr4 + 190214555 19519847 19519846 19519964 118 ATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:::...::.:x.:..::.::...:..:.x::.:.::...:.::..x:.:......:::.x.:..:::.:..x..::x::::..:....:x:.:.:.:.x..:.x:..:..x.:... 118M 61/118 51.7% 118/94230402 0.0% 0/118 0.0% -69496235 -24734167 +3295 chr4 + 190214555 19519864 19519863 19519932 69 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 11923452 NA +3137 chr4 + 190214555 19519875 19519874 19519992 118 ATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:::...::.:x.:..::.::...:..:.x::.:.::...:.::..x:.:......:::.x.:..:::.:..x..::x::::..:....:x:.:.:.:.x..:.x:..:..x.:... 118M 61/118 51.7% 118/94230402 0.0% 0/118 0.0% -69496207 -24734195 +3295 chr4 + 190214555 19519892 19519891 19519960 69 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 11923480 NA +3137 chr4 + 190214555 19519903 19519902 19520020 118 ATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:::...::.:x.:..::.::...:..:.x::.:.::...:.::..x:.:......:::.x.:..:::.:..x..::x::::..:....:x:.:.:.:.x..:.x:..:..x.:... 118M 61/118 51.7% 118/94230402 0.0% 0/118 0.0% -69496179 -24734223 +3295 chr4 + 190214555 19519920 19519919 19519988 69 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 11923508 NA +3295 chr4 + 190214555 19519948 19519947 19520016 69 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 11923536 NA +3204 chr4 + 190214555 19519976 19519975 19520043 68 CACGTACATACATACACACGTACATACACACGTACATACATACACACGTACATACACACGTACATACA chr4 - 94230402 7596412 7596411 7596479 86633924 86633923 86633991 68 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:::.x..:......x.:...:.........:.::..:.:.x...::...x...:....:..::x.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 11923564 NA +3051 chr4 + 190214555 19520004 19520003 19520072 69 CACGTACATACATACACACGTACATACACACGTACATACACACGTACATACACACGTACATACACACGT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:::.x..:......x.:...:.........:.::..:...x::.:....x:...:..::..:.x.:. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 11923592 NA +3405 chr4 + 190214555 19520011 19520010 19520127 117 ATACATACACACGTACATACACACGTACATACACACGTACATACACACGTACATACACACGTACATACATACGTATACACGTACATACACACG--TACATACATACGTATACACGTACA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCAT--ACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..::::.....:x.:...:.....::..:.x::.:.::...:.::..x:.:...--.......x..:::.::.:.x....x.:.::.......--.:.:.:.x:.:.x::....x.:.. 54M2D37M2I24M 69/115 60.0% 117/94230402 0.0% 4/115 3.5% -69496071 -24734331 +3347 chr4 + 190214555 19520029 19520028 19520139 111 ACACACGTACATACACACGTACATACACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016088 89016087 89016198 5214205 5214204 5214315 111 ACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .....:x.:...:.....::..:.x::.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 50M2D48M2I11M 67/109 61.5% 111/94230402 0.0% 4/109 3.7% -69496059 -24734343 +3326 chr4 + 190214555 19520029 19520028 19520096 68 ACACACGTACATACACACGTACATACACACGTACATACACACGTACATACATACGTATACACGTACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:...x:.:......x.:...:.........:.::..:...x::.:....x....:.::....:x... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 11923616 NA +3204 chr4 + 190214555 19520041 19520040 19520108 68 ACACACGTACATACACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:...x:.:......x.:...:.........:.::..:.:.x::...:..x...::..:....:x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 11923628 NA +3296 chr4 + 190214555 19520059 19520058 19520171 113 GTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016086 89016085 89016198 5214205 5214204 5214317 113 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:.:x::.:.:..:...:....x.:.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 52M2D48M2I11M 67/111 60.4% 113/94230402 0.0% 4/111 3.6% -69496027 -24734375 +3296 chr4 + 190214555 19520091 19520090 19520203 113 GTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016086 89016085 89016198 5214205 5214204 5214317 113 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:.:x::.:.:..:...:....x.:.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 52M2D48M2I11M 67/111 60.4% 113/94230402 0.0% 4/111 3.6% -69495995 -24734407 +3296 chr4 + 190214555 19520155 19520154 19520267 113 GTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016086 89016085 89016198 5214205 5214204 5214317 113 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:.:x::.:.:..:...:....x.:.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 52M2D48M2I11M 67/111 60.4% 113/94230402 0.0% 4/111 3.6% -69495931 -24734471 +3296 chr4 + 190214555 19520187 19520186 19520299 113 GTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016086 89016085 89016198 5214205 5214204 5214317 113 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:.:x::.:.:..:...:....x.:.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 52M2D48M2I11M 67/111 60.4% 113/94230402 0.0% 4/111 3.6% -69495899 -24734503 +3296 chr4 + 190214555 19520219 19520218 19520331 113 GTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACATACACACGTACATACATACGTATACACGTACAT--ACACACGTACA chr4 - 94230402 89016086 89016085 89016198 5214205 5214204 5214317 113 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:.:x::.:.:..:...:....x.:.:.::...:.::..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..:.::.:x...--:.....x.:.. 52M2D48M2I11M 67/111 60.4% 113/94230402 0.0% 4/111 3.6% -69495867 -24734535 +3296 chr4 + 190214555 19520315 19520314 19520422 108 GTACATACACACGTACATACATACGTATACACGTACATATACACGTACATACATACGTATACACGTACATATACACGTACATACATACGTATATACGTACATATACAC chr4 - 94230402 89016086 89016085 89016191 5214212 5214211 5214317 106 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCAC .:...:.:x::.:.:..:...:....x.:.:.::...:..:..x:.:.....--.....x.:::..::::.x....x.:.::...:...x..::::.:x...:x:... 52M2D54M 62/106 58.5% 106/94230402 0.0% 2/106 1.9% -69495771 -24734631 +3409 chr4 + 190214555 19520347 19520346 19520454 108 GTACATATACACGTACATACATACGTATACACGTACATATACACGTACATACATACGTATATACGTACATATACACGTACATATATACGTATATACGTACATATACAC chr4 - 94230402 89016086 89016085 89016191 5214212 5214211 5214317 106 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATAC--ACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCAC .:...:..x::.:.:..:...:....x.:.:.::...:..:..x:.:.....--.....x..::..::::.x....x.:.::.:.:...x..::::.:x...:x:... 52M2D54M 63/106 59.4% 106/94230402 0.0% 2/106 1.9% -69495739 -24734663 +3167 chr4 + 190214555 19553085 19553084 19553174 90 GTTAATAATTTGTGGCTTCTGTCTTTTTATTGTTGTTTGTATTTTCATTAACCCGGCTTTCGGTTTGTTTGTTTGTTTTTTTCATTTTTC chr4 - 94230402 69016148 69016147 69016237 25214166 25214165 25214255 90 GCTGATGTCTTACAGCTTTTTTCATGTTTTTGTTGTTGTTGTGTTTTTTGTGCAAGTTTTTGGTTTGTTTGATTATTTTTTTTACTCATC .:.:..:x:..:::....:.x..x.x..x........xx.:.x..:x..:xx.x:.:...:..........x..:.......:.:.:x.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -49463063 -44767339 +3150 chr4 + 190214555 19553142 19553141 19553232 91 TTTCGGTTTGTTTGTTTGTTTTTTTCATTTTTCTCTATTATTTTCCTGTTTTTAATTTCATTGATTTCTGCTCTAATTTTTATTATTTTTA chr4 - 94230402 21570923 21570922 21571012 72659391 72659390 72659480 90 TTTCAGATTTTTTGTTTGTTTCTTTCACTCTTCTCTATTGCTTCCCTTACTGCACCTTCCCTG-CTCCTTCTCCACTACTGAGAATGTTTA ....:.x..x...........:.....:.:.........::..:...xx:.x:.x:...x:..-:.:..x...:.x.x:.x.xx..x.... 63M1D27M 61/90 67.8% 90/94230402 0.0% 1/90 1.1% -2017781 -92212621 +3189 chr4 + 190214555 19554331 19554330 19554389 59 GTTTACTAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681925 8681924 8681983 85548420 85548419 85548478 59 GTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..:.:x..x.x..........:...::.:.:.:...:.....x:.:............. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 10872406 NA +3246 chr4 + 190214555 19554337 19554336 19554387 51 TAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681933 8681932 8681983 85548420 85548419 85548470 51 TAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .............:...::.:.:.:...:.....xx.:............. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 10872404 NA +3449 chr4 + 190214555 19554338 19554337 19554404 67 AAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 4865451 4865450 4865517 89364886 89364885 89364952 67 AAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTC ..:..x.x..............x.:x.x...x.x.x.:.........x..x....x........... 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% 14688887 NA +3128 chr4 + 190214555 19554344 19554343 19554412 69 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT-TTTTTTTTTTTTTTCCTCTGTTG chr4 - 94230402 56681943 56681942 56682012 37548391 37548390 37548460 70 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTGGTCTGCTG ......x:.:....x:.:...:....:..xx.......x...x...-....x.........xx....:.. 46M1I23M 53/69 76.8% 70/94230402 0.0% 1/69 1.4% -37127599 -57102803 +3026 chr4 + 190214555 19555400 19555399 19555459 60 AAATTTACTGTACTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT chr4 - 94230402 2972461 2972460 2972520 91257883 91257882 91257942 60 AAATCTACTCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTTTATCTGCTTT ....:....x.x:.............:...:.....:x:...::.x:....x.:.x.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 16582939 NA +3149 chr4 + 190214555 19564853 19564852 19564943 91 TGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACAAACGAAC chr4 - 94230402 36858292 36858291 36858382 57372021 57372020 57372111 91 TGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGC ...:.:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::......x..:.x.:. 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% -17293439 -76936963 +12180 chr4 + 190214555 19666880 19666879 19667188 309 GCATATACTC---CACAACTCACATTTTTACTTCAAACAGATTTATTAACAAAATTTGAAGGGCTTAATAATTTTCAAAG-AAAAATATTGCCTCTGGGAGTCAAGGGCCTTTTGAGTTGTGAGCCAAACCTGTCTTC--------TGTGTTCCAGATACC----TCTCAA--CTTTCTGGTGGGAGTT--TTGCAACATGCCTTTTTTATTAAGGATAAGAATTATTGGATCAAATGTGGACGTAAACCCAAAT---AAAAAAAATAA---TTAACAATACGAACTTGAAAAACATTTATTTTATTTCTCAAGTACCATTTGTTCTTTATTTGA chr4 - 94230402 16080409 16080408 16080735 78149668 78149667 78149994 327 GCAGACACTCTTACTTAAGGCACATTTTTTTTTAGTTCAGATTTATTAACAAATTTTGAACAACTTAATCATGTTCAAAATAGAAATATTGCCTCTGGGAGTCAAATGCTTTCTG--TTCTGAGCCAAATCTGACTTTGATATGTGTGTGTTCCAGATACCATAGTCTCATTTCTTTCTGGTGGAAATTCTTTGCAACATGCCGTTTTTATTAAGGGTAGGAGTCACTGGATGAAATTTTAATGTAAATTCTCATCCGAAACAAAATAAAATTTAAGAATGCatatttaaaaa------gtttttttttaaaaaaaacatttatttttaCTTTGA ...x.:....---.x:..xx.........x:..x:xx................x......x::......x..x......:-.:......................:x..:..:..--..x.........:...x...:--------...............----.....x--...........:.:..--............x............:..:..:.:.:.....x....x.x:.:.....::.xx..---...x.......---....x...:.:x.:..:....------:....x...:xx..:x.x.....:..:..xx..... 10M3I67M1I34M2D21M8I15M4I6M2I16M2I64M3I11M3I21M6D36M 236/301 78.4% 327/94230402 0.0% 34/301 11.3% 3586471 NA +21473 chr4 + 190214555 19684016 19684015 19684516 501 AATGCATTTTTTATGAGAAAGTCAAACTGGCCTTGTCTCACAGGCAAACACTCC-----TCACAGAAC----AGATGAGC-CTTTTTTGTTAAATTACAGAAACAGTGAAAGATTTATGATT---CTGCTAGACAAAATCCTTTT-GTTTTAAATAGTTGCCACTTTTCCATGAAGAAATCAGACACCTTGTTGGTGTTTTCTTATAGTAAACATAAGGTCACTGAAAGGAAACAGGCTAGATGAAAGATCACCACGGTATTAAATTACTTCCATCTGCAAACACTGTAAATCCCGTCGACATAAAAAGAGAAGTTATGGTTATAGCTCTGAAGTGTCATGTTTTTGGACTTGAAAAAAGTCCTTCTGCTGAGGACTTTATTCTATTGCCAAGAGTAAGAAACATGAAGTCGTGACGCAGTAACTGGACCATGTCAAAAGCATTCTACAGTAGA--------CATCGCGTTTACTCTCTTTTTCTCAGCCCCTTTTCGGTCGGTTCACTTCTAACATTATCTA chr4 - 94230402 16088925 16088924 16089433 78140970 78140969 78141478 509 AATGCATCCTTTGCAGTGAAGCCAAACTGGCTCTGTATCCTACAAAAGCACTCCCACTATCCCAGTGCTTAAAGAAGAATACTCATTTGTT------------CTGGGGAAGAATTATTATTATCCTGTTGGATAAAATCTTTTTTGTTTTAAGTAGTTCTGATTTTTTCCATGAGATATCCAACACCTTGTTGGTGTTTTCCTATAGTAAACATGGGGTCACTGAAAGGAAACAGGATAGTTGGAAGATCACCATGGTATTAAATCACTTCCATCTGCGAATACTATAAATCGCAAAGGCATAAAAAGAGAAGTTATGATAAGAACTCTGAAGGGTCATGTGTCTGGACATT-AAAATGTTCTTCTCCTAAGGACTTTATTCTACTGCCAAAATTAAGAAAGATGAAGTCATGACTCAGGAGCTGGACACTGTCAAAGGCGTTTAGCTCTAGAAATGTATTCATCCTGTTGAATTTTATCTTC-CATTCTCTATACGAAGGATGATCTTGGAATATTGTCTA .......::...::::x:...:.........::...x..x:.x:x..:......-----..x...x:.----...x..::-..:x......------------.x.x.:....x....x...---...:.:..:......:....-.......:.....x:x.:....:.xxx:...x...x:...................:............::....................x...x..:..........:..........:............:..:...:......x.:xx.:...................:.x.x.:........x.......x.:.....x.x-....x..:.....x..:..............:......:.x.......x........:....x...x.:......xx.......:..:..:x:.xx....--------....x:...x.x.:.:x.:...-..x:.:..x.x..:xx.:.xxx...xx..:...:.... 54M5I9M4I8M1I10M12D19M3I20M1I207M1D100M8I22M1D38M 369/487 75.8% 509/94230402 0.0% 36/487 7.4% 3595091 NA +5449 chr4 + 190214555 19686267 19686266 19686645 379 TATTTGTTTTAACCTGTATGTCCTCATATTTGTCTGAGAGGAAGAAGAGCAAATAA-TACTTATAAATTCAC---AAGGACGACTGGATCTTCACCTCCTGAAAACACAGGGCAAAGGTGGAAGCTCTGTCTGGCTGTCGTCGACATAGCCTGACGATATTATGGAGAGGCTGTCAGGTAGAAAACA---------CCAGTGCAAACCACATCATGACTGTCAAGAA-TCTGGCTCCATGTTTAAGAAATCCAGAAAGTTGCCTGGGAAAGAGTAATACCAGAAGCTTCCTTGGATTATTTATTTGATAAGATCTCTTCTCAGTGCTTCTGAAGAGAAAGAGAGAGACAAAAGATGGTATTGACAAAAAGTT--CTAGCTGTTTCAAAGGAAATC chr4 - 94230402 16090357 16090356 16090732 78139671 78139670 78140046 376 TGTTTGTTTATACATGTGGCTCTTTATAGCTGCTACTCAAAAAGTGCTGCATACAAATATTCAGGATTTCTCTAGCAGAAGGAACACAAATGCACACATTGAAGATAATGACTATAGGTGAAAGTTCCATTTGGCAGTTGTCCACACAGCCTGAAGATATTAACAAGGGGACCTCAGAGAAAGGTCAGATTTCTCTTCATCACTACCCAAAGCATTGTTACAGAGAAGTCTGGCTCTAGGTTCAAAAATTAC------TTTCCAGCTAAAAAG-AACTCCAGGAGTTTTCTTTGATTCTGCCTTGGAT-GGATCTGTAGT-AGCCCTCCCAAGGAGATGATGAAAGACAG----------TGATGAAGAGGTACATAAATATTTTAAAGAAAATC .:.......xx..x...:xx..:.:...x:..::xxxx.::...x:xx...x.:..-..:.:.x:.x...x.---x..:.x..x::x.xx.x...x:x:....:.:.xx.:x:.x.....:...:..::.:....x..:...x...:.......x.......xx:..:..x:x....:x.:.::x..---------:..x::.x.x...x.x...x::.::x:....-........:.x...:..:..x.x.------..x..x.xx...:..-..:x....:..:..:...x....x.x:x..x...-:.....x.xx.-..:x..:.::.:....x::x..:.....:----------...::..:..x.--x..:x.:...:....:..... 56M1I15M3I112M9I31M1I24M6D15M1D34M1D11M1D29M10D12M2I21M 221/360 61.4% 376/94230402 0.0% 35/360 9.7% 3595910 NA +3520 chr4 + 190214555 19689167 19689166 19689282 116 TTCTTTCCTTCTTTCTTT------CTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--TTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:.......x.x...:------..x...:..:..:.:::...:.....:..x::..::x.x.:::x:..:xx....xxx:....--..........:.........x.xx..::....:... 18M6I62M2I36M 76/116 65.5% 124/94230402 0.0% 8/116 6.9% -23392734 -70837668 +3395 chr4 + 190214555 19689171 19689170 19689290 120 TTCCTTCTTTCTTTCTTT------CCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCT--CTCTGTAGCTTCTTCTTTCT .:.....:...x.x...:------.:x..::..:..:.:::...:.....:..x::..::x.x.:::x:..:xx....xxx:....x.:...............--....x.xx..::........ 18M6I80M2D20M 76/118 64.4% 124/94230402 0.0% 8/118 6.8% -23392730 -70837672 +3334 chr4 + 190214555 19689211 19689210 19689328 118 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTCTCTCTTTCCCTCCCTTCCTCCCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:..:.:::...:.......:x.:...:x.x..:.x:..:xx:...xxx:....x.....:...:.........:.x:xx.:::.:..::.. 18M6I100M 72/118 61.0% 124/94230402 0.0% 6/118 5.1% -23392690 -70837712 +11903 chr4 + 190214555 19694024 19694023 19694778 755 TCTGCTTTGCAAGAGAAGGCAGGGACATAGAGCAGAAAGGGGAAGAAAGTAAGAAAGTGAAAGCCAAGACAGGC----------CTCCTTTATGAATCGTGT-CCAGGAGTCTT-TTGTCCAGCAG----TGTTAGAGTCTTGTGGAATGAGTGCAGGGCTTTTATTTCTCCTTTATAACTTCAACAGGAAGTTACTAC-AACACATGACACTTTCTGCCA---AAACAGCTGAC---TTTGGGGATGTTCATGAAAACGATTGAAA-TGGATGCCTTCTCCCTGAGCTACCAGGGAGCTGTACCTAATATCTTTAAGGGCAGCTTGGCCTTCTTCCAGCAGAGATACTATCTGATTTACTGCAGTGCCTACTGTGATGCCTGCACAGC-CCAACTTCCCACCTGACCAGTGGGAAACAGCTGCAGG-----AACATACCCTCCCCCTCCCCTTCGCCTCACTCCAGCAGGAAGGAGGAGGCCAGCTCAACATCTGTCTTTCTTATCTGTTTCTGATGTGCACAAAATTTCACATTTTCGGGTTGTCGTTTGTCAAAGAAGCTTTCAGGCATGTAAGTCGTCCCTCCTCTACTTCTTGTTTAGATC----------TTTCTGCAACTCATTTGGGATCCTCAAAAAATAAAAATAATCCCTCCTTCACAGAGCTCAACTAGGGGATGTTAATGCAGAGACGT-ATTTTATGTATC-----AGTTTCTCTTAATAGATTTCC-ACTGTTTTCATTATAAAAATAAAGTCCTAAGGAATAGGAAAGATGAAACATGTGACTATG chr4 - 94230402 16096822 16096821 16097547 78132856 78132855 78133581 726 TCTGCTTTGT----GGATATGGGGGCACAGAG--GACATGGAAGGA---TATGAAAATGGAAG--AGAACAGGGATGCAAGATGCTTGCTCATGAATTGCTTACCAGAAAACTTGTCTTTCAGTAGCCACTATGAGAACCTTCTAGAA-----ACACACCTTTGATTTTTCTTTTATACCATGAATAATGACATGCTGCCAGCATATATTTTTCTCTACCAGATAAATATTTTGCCTTTTTGTGGAT-----------TGACCGAAACTGAAAATCATCTCCCTCAATGACTAGGGGGCTGTTCTCTACATTTTCAGAGCATATTTGGACTTCTTCT-GTAAAGATGTTATCTGATTTATGGCAGTACCTTCTGTGATGCCTGCTAGGCACTGACTTTTCACCTGACCA-TTGGAAACAGCTGCAGACGAGTAACAAA-----------ACTGGCACTTAATTCCAGC---GAGTGGGAGGTCAATGCAACATCTG----TCTTGTCTTCTGCTTATTTGCAC--GACTGCACTTTTTTCCTCTTTTGCTGGTTAAAGATTCTCTCAAGCATTTCAGTAATGCTTGCCTCACTGCATGTTTTGTTAGGTTTTAAGGTTTCTGCAACTCTTTTAAGACT------------------TCTTTTATTTTAAG---CAAAGTGGGTAAAGTGAATGCAGACTTTTCAGCTTATGTATCTAAAGAGTTT------ATATATCTCCTAGAGTTTGGATTATGATAATAAAATCTGTTGGAAGTAGGTTTATGAAATGTACGTGTATG .........:----.:.x:::...:..:....--..x.x..:.:..---..x....:..:...--.::.....x----------..:x:.:......:.:x.-....:.:x...-.:x.:...:..----.:.x...::...x.:...-----:..x:x....x....:..:......x.x.x..:.:x:.xx.:..:.-.:..:..:x:x:.:...:...---...:.x:.x:.---....x....-----------:..::....-..:.x::.x.......x.::x..:....:.....x.::x.:..:..:.::.xxx::....x.......:-.:.:....::...........:x.....:...x.............xx:..-.::....::..........-.x..............:-----....x.-----------x.:xx.:.:.x.:......---:..x:.....:..::x.........----....:...x:.x..x..x.....--:.:.x...x....:xxx:.x.:.:.x..:.....xx..:...:....x.x...x:.x.:.x.:::...x.x.....x.x.x----------............x...::..::------------------..::.:x..:xx..---:x..x.:..x:.x..x........xx:x.-.x:.........-----.....------...x..:...-.xx....xx.....:.x......:..:xxx....xx:.:xxx......::.::.xx.... 10M4D18M2D12M3D14M2D9M10I18M1I11M1I11M4I18M5D46M1I21M3I11M3I9M11D9M1I69M1D51M1I19M1D17M5I6M11D19M3D25M4D23M2D81M10I22M18D14M3D29M1I12M5I5M6D10M1I60M 454/679 66.9% 726/94230402 0.0% 123/679 18.1% 3597202 NA +3095 chr4 + 190214555 19717449 19717448 19717574 126 ATATGTATACACATATATATGTGTGTATATATATACACACATATGTGTGTGTGTGTGTGTATATAT--ATATATACACATTCAGT------------TGCAGCA-TCAGTTCACTTTTAAAAGAAGAAATGTTTTTCTCTA chr4 - 94230402 40224636 40224635 40224776 54005627 54005626 54005767 141 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGTTGTCTA ...:x......:..:..xx.x.x...::.xxx:x...x.:x.x.............:.........--...:...::::....:.------------.x.x...-...x.x...x:x...:x:.xx.......x..x.... 66M2I17M12I7M1I36M 86/126 68.3% 141/94230402 0.0% 15/126 11.9% -20507187 -73723215 +3080 chr4 + 190214555 19717453 19717452 19717521 69 GTATACACATATATATGTGTGTATATATATACACACATATGTGTGTGTGTGTGTGTATATATATATATA chr4 - 94230402 4406403 4406402 4406471 89823932 89823931 89824000 69 GTAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...x.x:......xx.xx.x:..::......:.xx:...x................:...x:....... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 15311050 NA +3094 chr4 + 190214555 19717462 19717461 19717523 62 TATATATGTGTGTATATATATACACACATATGTGTGTGTGTGTGTGTATATATATATATACA chr4 - 94230402 37363042 37363041 37363103 56867300 56867299 56867361 62 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .:..:..::x........:..:....x....:.xx....:.:.......:...x:.:.:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -17645580 -76584822 +3574 chr4 + 190214555 19737411 19737410 19737561 151 AGTCAAAATAAATTCACTTGTGTTAACAGCAATACAAAACAAA-AACCCAAAAAACAGAGCCAGAGAAGGCCATGAAGGATTATCATGCATGAATGCCTAGTAACAAAAACAATCACAAAAGACTACAAAAACCACAACCTTGCACAAAGGC chr4 - 94230402 36775532 36775531 36775668 57454735 57454734 57454871 137 AGTCAAAACAA------------TGACAGCAAAACAAAACAAACAAACAAAAACACCCAACCA-ACAACAACAAAACAGACAACTATTGATGAGTTCCTATTAAAAAAAACAACCTTACACAATTACAAAATTCAC--CCCTGTATGGAAGC ........:..------------.:.......x..........-..x.x....x..xx.:...-.x..x:x..x:.x:..:x.::..xx....:.x....x...x........:.x:.x.x:.:.......x:...--..:..:.:::.:.. 11M12D20M1I19M1D72M2D14M 94/136 69.1% 137/94230402 0.0% 16/136 11.8% -17038121 -77192281 +4280 chr4 + 190214555 19740222 19740221 19740393 172 AAAAGCAAAGCT-----TTTTTTGCATTTACTTTGGACCAGTCAAAATTACAAGACCCTTTTAATATATTAACTCACTTAATCCTAGCAACAACCCTATGGAGGAGGTACTAAC-AGTATCTCCATTTTACAGGTAAGGAGACTGAGGCACAGAGAGTATAAATAATTTTCCAAAAAT chr4 - 94230402 10729101 10729100 10729261 83501142 83501141 83501302 161 AGAAGCAAGACTACTAATATTATGTACTCACTCTG----------------AAGATCCTGAATAAACAGGAATTGATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT .:......::..-----.x..x..:.:.:...:..----------------....:...xxxx.x.:.xx..:.x.:...:-...x:...:.x....:..::.x.....x.x..-.x:.x...............::.:.:...........x.x..xx...:......x..x.:.:. 12M5I18M16D30M1D32M1I63M 107/155 69.0% 161/94230402 0.0% 23/155 14.8% 9011121 NA +27109 chr4 + 190214555 19748908 19748907 19749656 749 TACATCACTCAGGTTTGTATGGAAACCCAAAGTACAGTTTGCAAATATGATGGTATTCATCTTCCTGAAATTGGCACAAATTACAAATGTTTGTTTGAGAAGTTAATAATTTCACATATGCTTTTGACAGTGACATATCAGCAAACAATTTTTATAGAGCATTGCACATACTTCTAACACACCACAGCTGAGGTCTGATTCAAGCTAAAACCCCAAGTGACTATAAACCAAACAATTATTTTTTTTAGCCCTAATGTGTTTGCTTCCTAATGACCCACAGCCTTAAACTCACACTGAGCGGGACAGCATAAACTTTCTTTTTTTATGCTCCAGGCCCCAACAGGGCAAGGCACATTCTGGAAGACTACTTGTGGGTGACCAAAGTGCACTTTAAAACATCAGCAGCCTTTGATCAGGGCAGCTTGCTTACTTTTAATTGTTTCCAGAGTGCTTGTTTGGAAATTTGTTAGATTACACATCACATGCAATGGGAATTGATG-GCTGAATTCCCTGCCTTAATCCTTGGCTCAGAAAGGAGTTATGCTTACTTCAGTTACACTTAGGAGACTGAGCTTTTGACCCAG--CAACATAAAGGTGATTTCAGTT----GCTGTCTCTTTTCACCCATACCCAAAATAACAAGAAATGAACTG----AGAGATCATTTAGGA--AAGTGTGAGGTAATTGGTTGCTGGCTATTTTTTTTTTCTGGCTGCACTAACTTTAATCAAAGATTCTTTTTTTTACTTCTTCAT chr4 - 94230402 16107362 16107361 16108098 78122305 78122304 78123041 737 TACATCAGTT---TTTTCATAGTAATCTGGAATATATTTTTTGAATGTTGCAGTATTTTTCCTTCT----TTGGTAACAATTTCATGTGTTTGTTTTGGAAGTTAATAGTGTAACATATGCTTCTGTCAGTGATATATCAACAAACTGTATTTATATTGTATTGTATGTTCTTGTAGCCCACCACAGCTGAGGTCTGATTGAGACTATAGCCTCAAGTGACTATAAACCAAACAATTATTTTTTAAA---CTAATGTGTATGCCTCCTAATGATTCACAACATTAAACTCTCACTTGGCAGGACAGCAAAACCTCTTTTCTT---TGCTCTAGGCATAAAAATCCTGCAAAACATTTTTTTTTAATGGTCGTGGGTGACCAAAATGCAATTTAAAACTTTAGTGGTATTTGCTCAGGGTTGCTTGCTTACTTGTAATTGTTTCCAGAATGTTTGTTTGGAAATTTGTTAGATTATGTATCACACGCAAT--AATTCAATATGCCAAATGGACTGCTGTAATACTTGGCACTGCAATTGGTTATGCCTATTTCAGCACCACTTAAAATAGTGAGTTCTGTATGTAAACAAGAATAAAGGTGATTTCAGTGTATAGTTGTTTTTTTTTTTCCCTGTATGCAATAACGTTAAATGAGTTGCATCAAGAGTTATTTCTGACTATATGTTTTGCAATATATTA-TAGTCACTTTTTCCTTTTGATAGCA--AAAGTAAACCA-------ttttttctttttctttat .......x.:---...x:..:.x..:.:::.:..:.x...x::...:.x:::.....:x..:.:..----....:.xx....x..x:.........x:..........:.x.x..........:..x......:......:.....x:.x......xx.:....:.::.x...x..:.x.....................x.::...x.:..:...............................xx.---.........x...:.........::....:.x........x....x:..:........x..x..:.:..:..---.....:....x:x..x.xxx::x::x.....:.xxxxx.x.:x.:.............:....x........x.:..::.:x....x......:x............x..............:..:.......................:::......:.....--:.x.::..:-..::...xxx....:x....x......x.x.x..xx:.......:..:.....:xx......::.x.x....:.:.xx.:x:.:--x.:x.................x----.:...:.:....:x:..x.::x::x......:xx......::..----.::::.:....xx..--.x:...xxx.:...xx:..:-.:.::.:.....::..:..::x...--..xx.x..:..-------......:.x:.....:.. 10M3D53M4D177M3D72M3D164M2D9M1I84M2I22M4I44M4I15M2I20M1D25M2D11M7D18M 513/724 70.9% 737/94230402 0.0% 38/724 5.2% 3641546 NA +3116 chr4 + 190214555 19751968 19751967 19752026 59 CTCCTGGATTTAAGTGATTCTCCTACCTCAGCCTCTCAAGTAGCTTGAATTACAGGCAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:....:..:.....x...x.xx:x........:..........x...:....x.::. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 1554829 NA +3189 chr4 + 190214555 19772392 19772391 19772451 60 TCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAACTCCAGTAATATA chr4 - 94230402 28297985 28297984 28298044 65932359 65932358 65932418 60 TCATGAAAAAAAACAAAAAAAAAAAGCAAGGAGATAACAGAAAAAAATTACAGAAATATA ...x:........x............x..:..:.x.:x.:..:....:.x...x...... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -8525593 -85704809 +3004 chr4 + 190214555 19774213 19774212 19774282 70 AAGGGGTAAAGGAAGGAAGGAAAAAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAACAGGGAAAAAA chr4 - 94230402 30232171 30232170 30232240 63998163 63998162 63998232 70 AAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAA ..:....:..:..x....:.:..xx.:.:....:.:x..x.........:...x:x:..x...:..::.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -10457958 -83772444 +3632 chr4 + 190214555 19798563 19798562 19798632 70 CTCCTTGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGCCATGTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..x..........x...x.xx.x.........:...........:.:....--.:..::....::.. 54M2D14M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 1601424 NA +7633 chr4 + 190214555 19810645 19810644 19810957 313 AGTAACCATTATTTCCAGACTTCTTAAAATATGCAATAGTATTCAAGGAAAATACAGATCATAAGCAGCCTAAACAC--------TGAATGACTTATTTGGGTGGCAGGAGAAGCATCCCCAGAGAAAAC-CGTTATTAATAATTGTAATTAATTTTGGTGTGGCAATATCCACAAAGATATGCAACACTGAGCTAAGTAATTTCTTTCCAGATAATTCTTTCTGACAAATAATTCATTTGGTTTTCTAAGATATGTTAATGAGTTAAATAAAGTGCCCTAGATAGATTTCTCAACTGGTATAGAAAATTAAAAATGGCTGC chr4 - 94230402 16130834 16130833 16131123 78099280 78099279 78099569 290 AGTTACTGTTATTAGCAAGGATCTTAATATATGGAATAATATTTT-GAACACTGTTAATCATTTACAAAATAAACACAGTCTAGTTGATATAATTCTCTAGTTGGTAT---AAGTCTCCCAAGAGAAAAAACATTATTAAT----GTAATTAATTT-GGAGAGGTGATAC------AGATATGCAACAGTGAATTCATTAATTTCTGTTGAAATAATTATTT---ACAAATA-TTTATCTGGTTTTCCAAGACATGCTAATGAGTTGAAAAAAATGTT-----TACATTGTATGATTGGC--------TGAAAAATGGCTAC ...x..::.....xx..::xx......x.....x....:....:x-.:.x.x.::x:.....xx:..:xx.......--------...xxx.x..x.:.:.x...:.x---...:x....x........x-.:........----...........-..x.x..::...:------............x...::.x.x........x.:x.:......x...---.......-..:..:........:....:...:.........:..x...:..::-----..x...x:x::.:...:--------.x..........:. 45M1D31M8I23M3D19M1I10M4D11M1D13M6D46M3D7M1D45M5D17M8D14M 204/281 72.6% 290/94230402 0.0% 41/281 14.6% 3679811 NA +3106 chr4 + 190214555 19821506 19821505 19821603 98 GTATAATTTAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAAAAAAAAACTATATGGTAGTAGAAAAGAATGGGATAAGTCTAACTTTTGTATTCTCTGT chr4 - 94230402 45031395 45031394 45031492 49198911 49198910 49199008 98 GTTTTGTTTAAAAAAAAAAGAACAGAAAAGTAAAAATGAAAACAATGCTCTGTGCTAGAATCAGGTGACTGATTTGATTCCAGTTTTGTTTTACTTGT ..x.x:................x.......x.....x.....x..x:..x.:..x...x.xx.::x:.:x.:x.x::.::x.x......x..x::... 98M 64/98 65.3% 98/94230402 0.0% 0/98 0.0% -25209889 -69020513 +3092 chr4 + 190214555 19821515 19821514 19821569 55 AAAAAAAAAAGAAAAGAAAAGAAAAAAAGAAAAAAAAACTATATGGTAGTAGAAA chr4 - 94230402 41345714 41345713 41345765 52884638 52884637 52884689 52 AAACTATAAAGAAAGGAAAAAAGAAAAAGAAAAAAAAACTAT---GAAGTAGAAA ...xx.x.......:.....:.:...................---.x........ 42M3D10M 45/52 86.5% 52/94230402 0.0% 3/52 5.8% -21524199 -72706203 +6905 chr4 + 190214555 19847132 19847131 19847402 271 TTATTTCTTTAAAATACATTTTATCTACAATACATACATGTTTAT-TACCCCCTGGGAACTTTTATTAGGCTTTAGAAGATGTGCAAAACATATTTAGGAATAAATGGACCAGAAATATTAAACCATTAAAGAATTCACCTAAATTACATAATTATACAGCAACAATATAATCTAAATTTAGTATATGTCA---AAAAATTTAAGTAGTTTATACGAAATTATGAACAAAAGTGTTACAGTTCTACCAG----TCTGTGAAATTGAATGATGCAAAATA chr4 - 94230402 16143724 16143723 16143993 78086410 78086409 78086679 270 TTAGTTCTTTCAAGAACATCC-ATTTTCAATGTGTTTCTGTTTTTACATTCACTAGGGACCTGTGTGAGGATCTGGAGTACATATATGAAACATTCAAGACCAAATGGACCAGAAAGATTACAACACTAAGGAGGACACCTAAATTAAACATTTATTCAGCAATGATGTAATC------TAGTACATGCCAAACAAACACACAAAAAATTGATTTTAAA--ATGGAAAAGATGACAACCAGTCTCACAGACTTTCTTTGAAAATGAAGGATGTTAAACA ...x......x..:x....::-..:.x....:::.x:x.....x.-:.::.x..:..:..:.x.:.x...x.:.:..:x.::.::.x:.x.:...:.:..x:..............x....x.x..:...:..:xx...........x.:.x....x......::..:.....------.....:...:..---...x.:x:..:x.:..x..x:x...--...:.x..:.xx::x..x:x...xx...----...x.....x....x....:x...:. 21M1D23M1I127M6D12M3I25M2D28M4I26M 173/262 66.0% 270/94230402 0.0% 17/262 6.5% 3703408 NA +6389 chr4 + 190214555 19870660 19870659 19870932 273 TCTGTTTCATTCAAATATATGGCTGTAAATCAGGCATCAAGTGGAATGCGTGAAATCTTGGTGTGTA-GAAGCACTTTTGCATAACCAAAAATTGAGATCAATGAAGCTAATCTGAAATCCCATTGACAAATCTGTTGTGCATTTAATAACTTTTTTCACCTAGAGAAGCAAAAATAAATCATA-GGATTTATTATATGCTACAGA--ATGATACACATC---TAAGTGTTGAATAAAACCTCCAGAGAGCCATCAGTTTATTTAAAGAGAACTTGGAAA chr4 - 94230402 16148400 16148399 16148675 78081728 78081727 78082003 276 TTTATATCATCCAACAGCCTGACCCTGAAACATGTGTCATTGGATTTATATCAGATCTTAACATGTAAGACGTTTCACTGCATAATCAGAAATTGAGACCTGTAAAACTAACGTTAAACACCATTGACAGATCTGTTGTCCATTCCGT--TCACTCTCACCTCATGAAGCTAAATACAATCACACATATTTAAGAGATCTTGTAAAAGATGATAAACACCACATAAGTGTTAAA-AAGCCCACTGGGGAACCATCAATTTG-AAGAAGGGAACTTAAGAA .:.:.x....:...xx::x..:.:x.:..x..x.::...xxx.:xx.:::.x.:.....::::....-..x.:x::x:.......:..:.........:.x:.:..:....:x.x...:x.........:.........x....:x:.--::x:.:......x:x.....x...xxx.....:.-:x.....xx.x..x:.::.:.--......x...:.---........:..-..:x..x.::.:..:......:...:-xx:...:......:::.. 67M1I80M2D34M1I21M2I12M3I11M1D26M1D18M 171/269 63.6% 276/94230402 0.0% 11/269 4.1% 3722260 NA +22604 chr4 + 190214555 19941125 19941124 19941907 783 ATCATTTAAAATGTATTTTTAAATCACCTCTCC-----------------ACTACCATTTATAACGGATACATTTTTAA-CTCTGATAATTAATCAACTCTGACACATTTCCTTCCTTTTTGCCTTTTTCTCCTCTGAAATCCTTCTTTTATAAGGAGCCATTTTTAATTTCCCATAGGCAGAAAACCAGCCAACATATTCAGGTCCCA--------AAGTTTCATCTAT-GATGAAGCTTTGGAAGTTTATGAATTAAGAAAGTTGAAAAGCAATCTTCACTGTAGATAGTATCTTGACATACATGTGTCATGATCAGAGTGACACTTCCCTTAGGAATAGAACCTCACTGGTCATGACT---------ATCTAAGGAAGGCATTGCTTGAAAA--TTATGTACCTCAAGTTCATGGCCATATCACATTTCCCCACGTCTTCAAGCACCAGTCCATCAGATAATTTCTCTTACAGAGATTCCAGTACTGTAATTTGCCTCTGC---TTTAATCAACAGTGAGATAATATAGAAGCCGCATTAAATGATTCAGAATCATTTCATCTGCAGGAAACCCATTAGTCTAACCATATTTTCCCATACTTCTCAGCACCATGTCCTGTCATCTGGAAATAATAGATACCATAAAAGCAAATTCTAAAAGCTTAAAAAA-----ATGCTAGGGCAGAGCACATGGTGTTTATTTGGAGGTTGATATTACCACAAATTAATCAAAATGGGGAATTTTTTCCAGTATATTTGAATTCGATTTCCGTATGAAATAATGCTAAAATG----TTACACTTAAACATGATATATTTACATATTTA chr4 - 94230402 16175785 16175784 16176594 78053809 78053808 78054618 810 attattttaaagatatttttatttttttCTTTCTGTTAGATCTGCAACAGACTGCCATTAGTG-TGGGTACATTTTTAAGATCTAGTAATTAACAAGTGCCAGTATGT---ATTTTCTTTCATCCTTCTGACATCTGAAAA-------TTAATAACAGCCAGTTTTAATTTTCTATGTGAAGAAAACCAAACTTCTTCCACAGGTATTATGATTGTGAGCTTTAATCTATTGAAGAACATCTGAGCTCTTTTAAATGACGAAAGCTGAACA-CCACATTTAGTCTAGATAGAATCTT--CACACTTGTGTTGTGATAATGGTAATATATCCAGTGGGAATATAAATTCTCTGCCCATGACTTTGTCACAGATATAAAGA-----TCTCTTGGAGAAGGCATATGCATCAGGCATAAGAATATAAGACATTTCTCCACCTCTGCAGGAATCAGTTCATCAGATAATCTAT-TTAAGGAAATTCCAGCACTGTAATTTGCCTTTTTGCTTTTAAGCAACCAAGTGATAATGCAGAAGCCATGTTCTATGATTTAGAATGATTTAGTTTGCAGGAAGCCCATTAATTTAACTGTATTTTCCCATATATTTCAGCACTGTGTCCTGTCATCTGGAAATAATAGAAGCCATAGCAGTAAACTATGAAAGCTAAGAAAAAAAACATGCAAGTACAGTTCACATGGCATTTACTGGTATGCTAATGTTAGCCCAGCCTAACCAAAATTAGGG---TTTCTCGGTAAACCTGGATTAGCTTTCTAGCGAAAGGGATACTGAAGTGGCAATCAAAAACAAATGTGTAGTAGTTCTATATTTA ..:....x...x:........xx.:x::::.:.-----------------...:.....x:.:-:..:...........-x...::.......:x.::x.::::.::.---x..:::...:::.:..:.xx.x.......x-------...xx.:x.....x.........:.:..:x.x.........:x.xx.x.x:x.....x::.--------.:x...x......-..x...xx.:..::xx:..x.:...x.x.....:....x.-.x.:x..:.x.x.......x.....--..:..x.....::....x.x:..:.:.:x...xx.:......x..x:..x...x:.......---------..x...:..-----.:x....:.:.--x:..:.:.x...:.:x:.x.:x:...xx.......:....x...x..:.x.:....:...........:.x.-...x:..:.......:..............:.x:---.....x....x:x.x......::.......:::..xx......:.....x....x:.:........:.......:.:....::............:x.:.......::.........................x:.....:x..:...:.x.:......x.:....-----....x..x:...xx.......::....:.x.x.x.:.:..:...x.x..:x:...:......x:..:---...::.:...x.::..:...x.x....::xxx:..:x:..:..:..:..----.:.x.xx:...::..xx:..x..x:....... 33M17I13M1D15M1I28M3D30M7D61M8I13M1I40M1D25M2D62M9I9M5D11M2I72M1D34M3I166M5I67M3D49M4I32M 517/760 68.0% 810/94230402 0.0% 73/760 9.6% 3765340 NA +3131 chr4 + 190214555 19965156 19965155 19965203 48 TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATGTATGTATGTATA chr4 - 94230402 27486725 27486724 27486772 66743631 66743630 66743678 48 TGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATA ..................:x..x...x.....x......x...x.... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -7521569 -86708833 +3081 chr4 + 190214555 20020666 20020665 20020723 58 TATCTCAAAACACACACACAGACACACACAGACACACACACACACACACACATCCCTT chr4 - 94230402 87372741 87372740 87372798 6857605 6857604 6857662 58 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ...:..x.......................xx:.:..::.:::..::.:.:..::... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -67352075 -26878327 +3106 chr4 + 190214555 20024766 20024765 20024824 59 TATGGGTGATTGGGTCTTTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTGTTTTGG chr4 - 94230402 23981548 23981547 23981606 70248797 70248796 70248855 59 TATGGGGAGTTGGGGTTCATTTTTTGTTTGTTTGTTTTGGATTCTTTTTTTTTTTTTGG ......x::.....x:.:x..........x.........xx..x....x...x...... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -3956782 -90273620 +5963 chr4 + 190214555 20037668 20037667 20037925 258 AAAAATTAATAACCAGTGAATGATTTCACCTCTTTTTTATTTTTATTTTTAAAAAGC--ATTCCCACTTAAAAAATGGGATGAGGTGGGATTCCCTCATTCTTAAAAATGTTTCCAAAGCTATTAAAAAACTTGCATTTACAAAATAATTGATAAAAATATTCCTCT-TATTACCCA------AGGGAGACAGGGACGACAGAT----AAGACATAGTATA----TGATATTAGTCTGACTTGGCTTCTATCTCTCCAGCTTCATCAGAGGCTGG chr4 - 94230402 84764214 84764213 84764466 9465937 9465936 9466189 253 AAAATTTAAAAAC-----AATGATTTTTTTTTTGTTTTGTTTTGTTTGTTAGGGATTTAATTCCCAAGTAAC--------CGAGATGAAGATGTTCCATAATTAAA-----TTC--ATGCTA--AAAAAACCTGCATTTATAAAATAGTTGATAAAAATATTCCTCTCTGTTAACAATACAGCATGGAGGTACGGATACCAAATGATGGAGATATAGGGCAGGGTTAACATTACTCGGACTTGGCTTCCTTATCATCAGATGCTTCAGCAGCTGG ....x....x...-----........:x::.:.x....:....xx..x...:::.x:--.......xx...x--------:...:..:::x.x:::...xx.....-----...--.x....--.......:........:......:...................-.:...x.x.------.x....::.x...::x..:..----:...:....x::.----.:.:....x..x...........:x.x..x:...x.x.x....x:..... 13M5D39M2I13M8D26M5D3M2D6M2D43M1I9M6I21M4I13M4I50M 170/236 72.0% 253/94230402 0.0% 39/236 16.5% -64726546 -29503856 +3194 chr4 + 190214555 20038284 20038283 20038373 90 TGTGTGTATATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATATATATGTGTGTATA chr4 - 94230402 39267121 39267120 39267210 54963193 54963192 54963282 90 TGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ...:....x.x.x.x.xx.x::....x..:.......:x.:.::::.:xx.:.......:......x.....:..x.:....x:.:..:. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% -19228837 -75001565 +3135 chr4 + 190214555 20038292 20038291 20038359 68 TATATATATGTGTATATATATATGTGTATATGTGTGTATATATATGTGTGTATATATATGTGTGTATA chr4 - 94230402 39267143 39267142 39267210 54963193 54963192 54963260 68 TATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ....x..:.......:x::::.:...xx.:.......:......x.....:..x.:....x:.:..:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -19228851 -75001551 +3378 chr4 + 190214555 20053671 20053670 20053742 72 CTGCAACCTCCACGTTCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGCAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.xx...:...........x...x.xx.x........::::........x..:....x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 1856545 NA +3063 chr4 + 190214555 20062662 20062661 20062731 70 GTGGAAAACAGACCTTTGCAAGTGTTTATTTTATTTATTATTATTATTATTATTATTATTATTATTATTA chr4 - 94230402 13552252 13552251 13552321 80678082 80678081 80678151 70 GTAAAAAGGATCCCTTTGCCAGCTTTTACTTTATAGATCCATATTCAAATTATTGTTATTATTATTATTA ..::...:x.xx.......x..:x....:.....xx..:xx....xxx......:............... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 6510410 NA +3235 chr4 + 190214555 20085153 20085152 20085213 61 TATATATAAATATATATTTATATATATATTTTTATATATATAAATATATATTTATATATAT chr4 - 94230402 73418585 73418584 73418645 20811758 20811757 20811818 61 TACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGT ..:.....x.........x:.:.........:.:.:.....x....x.x.....xx...:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -53333432 -40896970 +3160 chr4 + 190214555 20091619 20091618 20091672 54 AAGGGGAGAAAAGAAAGAAGGAAGGAAGGGAGGAAGGAAGGGAGGGAGGAAGGG chr4 - 94230402 69066695 69066694 69066746 25163657 25163656 25163708 52 AAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAA--AAGGGAGCGGGGGTGGG ....:.................x...x....:...--.......x.:..:x... 35M2D17M 44/52 84.6% 52/94230402 0.0% 2/52 3.8% -48975076 -45255326 +10630 chr4 + 190214555 20091730 20091729 20092189 460 AGAAAGAATCCTGTTTTCACAAACTCAGTTTGAAGAAGATAAACTTATAACTCTAAA-TTTGCAAGTATCTTCAACGTGCCTGGTGTCTTACATAGAAGGAAAC--AAAGCTCAAGATGTTACATTGGTAATAATAAGTTAACTAAGCAAGCATGTTGAATTATTAAATTTGGAGAATACATTGTGCTTATTATGTTACTTACCCTTGCAGTGAACTAGAAAATGAATGTGGTCATTCCAGACTGGTTAAATT-GGAAATATATTTTATACAGATGTGTGTAATGTAGTTTCCTGGCAGAGGAATAATGCACACAACTTATATTTATAAGTATACAAATCTGGTTTTATATTACAATGCAGTTCTGTAAAATCAGATT------TCCCCCTCTGCACTTTGGTTTTCACTTTCAGGATATACTTACC-TCCTTT---TATCATTTAAAGTATCTTTATTAAAACACTATTTTTT chr4 - 94230402 16218829 16218828 16219258 78011145 78011144 78011574 430 AGAAAAAGTCATGTT--AAGAAACT----------AAGAAAAATATAATATTCTGAAGCTTCTAAATGTCTTTA---TTCCAGATAATATACTTAATAACAATTGGAAGGCTGAGGAAAT-GTATCTACAGTAGTTAGTTAA--AAATATAACTGCTGAATTATTACATTTGGAGAAT-------TCTGATTCCATTACTTATC-----AGCAAGCTAGAAAATCAGTGTGGTCATTCTAGACTGGTTAAACTGGGAAATGTATTTTATACAGATGTGTCTAATATAGTTTTCTG---AAAGAATTAGGCAAAAATCTT-----------TATAAACACATGGTTCAAGATTAGGGTACCACTTTTAAATCTGTGCTTTTTCTGTTTCTTTCTGCCTTTTGTTTTTCATTTTTGGGTTATACTCATCATCCTTTATATATCATTTTAAAAGGTTTTATTTAAACATTTCCTTTT .....:.:..x....--x.x.....----------....x...:x..xx.:...:..-:..x:..:.:....:.---.x..x.:.:x:x...x..:x.:x..x:--..:...x.:..x:.-::..:x::.:..:.x......--..::.x:xx..:..........x...........-------x..x...x::.......:.-----..::.:.........x.:...........:............:.-......:..................x....:......:...---:.:....x.x...x.x.x...-----------....x.x.:x.....:x.x....x::.:.x::.:.xx..xx.xx.x..------.::.::.....x:....x......:...::..x......:.:.-......---........x..:x:x:......x.....:.x::.... 15M2D8M10D22M1I16M3D27M2I14M1D21M2D34M7D19M5D44M1I41M3D21M11D48M6I43M1I6M3I37M 292/416 70.2% 430/94230402 0.0% 58/416 13.9% 3872901 NA +3173 chr4 + 190214555 20093408 20093407 20093479 72 CTGCAAGCTCCACCCCCTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAAACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:x.:xx.x.::.........x.:xx...x.xx.x........::..........:.......x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 1896282 NA +3098 chr4 + 190214555 20112614 20112613 20112712 99 CTGTTTCAAAAACAACAACAACAACAACAAAAGAAAACAAAACAAAACAAAAACAGTGGCTCACACCTCTAATCCAAGTCCTTTGGGAGGCCAAGGTGG chr4 - 94230402 50999481 50999480 50999573 43230830 43230829 43230922 93 CTGCTTAAAAAACAACAACAGCAATAAAACAACTAAACCAAACAAAAAAAAATCATT--TTCAC----CAAATAAAAAATCTATGGAATGCAAAAGCAG ...:..x.............:...:..x.x..xx....x........x....x..x.--:....----.x...xx..:x:..x...:.x..x..:.::. 57M2D5M4D31M 67/93 72.0% 93/94230402 0.0% 6/93 6.5% -30886867 -63343535 +3148 chr4 + 190214555 20134244 20134243 20134325 82 AGGCAGAGCTGGAGGGGAGAAGG-------AAAAGG-----------GAGAGAAATAAAAAGAGAGGAGGAAGAAGAAGAAAGAAAGGAGAAGAAGAAGA chr4 - 94230402 60919584 60919583 60919683 33310720 33310719 33310819 100 AGATGGAAGTAGAAGGAAGAAGGCCAGGTTAAAAAACAAATTTTACTGAAGGAAAGAAAAAGATGGTAGGAGGAAGTAGAAAGAAAGGAGAATTAGAAAA ..:::..:x.:..:..:......-------....::-----------..::....x.......x:.x....:....x...............xx....:. 23M7I6M11I53M 61/82 74.4% 100/94230402 0.0% 18/82 22.0% -40785340 -53445062 +3849 chr4 + 190214555 20134303 20134302 20134483 181 AGAAAGAAAGGAGAAGAAGAAGAAA----------GAAGAAGAAG--GAGAAGAAGGA--GGAAGAAGAAGGAGGAGGCGGAGAGGAAGAAGAAGGAGAAGGAGGAGGAGAAGAAG---------AAGGAGAAGAAGGAGGAAGAAGAAGGAGGAGGAAAGGAAGAAGAAGGAGAAGGAGGAGGAGAG-----GAAGAAGAAGAAGGAG chr4 - 94230402 83391958 83391957 83392166 10838237 10838236 10838445 209 AGGGAGCAGAGTGAAGAGGAAGAGGTCTGCTTAGTGAAAAAGAAACCGAGGTGAAAGAATGAATTAAGCAGAAAAAGGCAAAGGGGAAGCTGACAGTGAAGTGGGACAGGTGGCAGCTTCAGACAAAGAAGAAAGGAGAGGAGAAAACAGGAGGAGGAAAGCTGCTTGATGCAGAGTGATGATAAAAGCTCCAGAAGCAAAAGCAGCAG ..::..x.::.x.....:.....::----------...:.....:--...:x...:..--.:.xx...x..:.::....::..:.....xx..x:.x....x:...x::.x:.x..---------...:....::::.....::..:x.............xx:xxx..x.x...:x..x..x:.:..-----....x.:...x..x.. 25M10I10M2I11M2I56M9I63M5I16M 117/181 64.6% 209/94230402 0.0% 28/181 15.5% -63257655 -30972747 +3029 chr4 + 190214555 20134469 20134468 20134563 95 AAGAAGAAGAAGGAGGAGGAGAAGATGAAGGAGAAGGAGGAGAAGAAGAAGGAAGAAGAAGGAGAAGAAGAAGAAAGAGGAGGAGGAGGAGGAGA chr4 - 94230402 92025137 92025136 92025231 2205172 2205171 2205266 95 AACAAAAATATGTTAGAGGAGAAGAACAAGCAGAAGGAGATAAGGTAATAGGAGCATGAAAATAAATACTCAGGAGGAGGAAGAAGGTGAGGAGA ..x..:..x.x.xx:..........xx...x........:x:.:.x.:x....:x.x...::x:..x.xxx..:.:.....:..:.:x....... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% -71890668 -22339734 +7855 chr4 + 190214555 20174115 20174114 20174567 453 GCACTG-GAAAAGAGTAATCCTATGGTGCTGTCAGTTTTAATCCCCTGTGGGTCATGACATCAAGAGTGCTGTAAACCATACATGCAAGTCA-ATGTCTGTAGTTTGGATTATGTGGTAGCAGACAAACAATACATAACAAGGATGAACAACACAGAACCATATGGGTGTCTCCTTACAAAACATATGTTATATGTCCATGAGCACTAAAGCAATT-CCAAGGCATTGTAAACTTGATAT------TTTTGAAATGTCCTAGAGCAAGTGCTTTTGGGTTTGAACAAT-TACTGATAATTTGTTATATAAAATGTGTTTGTTTAAAAATATATTAAAGAGCATATGGTGGCAATGAACATA----------------------AAGTAATGGTTTC-----AGTTATA---TGAGTTTTTTTCATATAATCTTAGGG-ATTAGAAATGGACTACTTTCAGAATTTACAATAGC----------CAATTTGGTATAAGAAAATAA chr4 - 94230402 16239304 16239303 16239774 77990629 77990628 77991099 471 GCGCTGTGACAGGTGTAGGGCTTCAATGTTGTCAGTTATAATCCTTTATATGTCACACCTTCAATCATATACTGAGCCATGCATTTTAAACAGAAGTCTGT--TTTCTAGTCTGTGGCAACAGAGTGCCAGGACATA-----------CACTGTACAACCATATGGGTGTCTCTTTGCAGGACATATGTTGTACATCCTTAGGCACTAAAGCAATTAACAAGCAACTGTAAAGTAAATGTGATCTCCTCTGAAAAGCTCCAGAGCA---GCTTTCAGTTTTTAAAATTATATTGCTAATTTATGCCATAAAGAG-----ATTCAGA---ATGTCAGAGA-CAGGTAG----AATGATCATAAATAAAAGCAACATTAAGAGGTAAATACTGGTTTCTTTTTAGTAACAACTCCAGTATTTTGCATGT--TTTTAGAGCATTATGAATCTAAAGATGTTAAAA--TACAATAACATCCAGAGGGTAATTCAGTATAAGAATATGA ..:...-..x.:.x...:xx..x:::..:........x......::.:.:x....::x.x....xx:.::xx.:.:....:...x:x.:x..-.x......--...xx.x.x.....:.:....xx:x..:x.....-----------..x:::.x.................:..:..::.........:..::...x.::..............-x....xx.:......x.x:..:.------:.:.....x.::.:......---.....::.x...x..x.x.-..:..x......:.xx:.....:x.-----:..:.:.---..:.:.:...-..x:.:.----.....x....----------------------..:..x.......-----...x.:.---:x...x....x...:.--.:....:.-....x:...xx.xx:x.x.:.:..--.......:.----------:....::.........x..:. 6M1I85M1I8M2D34M11D68M1I23M6I20M3D19M1I25M5D7M3D10M1D7M4D10M22I13M5I7M3I16M2D8M1I24M2D9M10I21M 289/420 68.8% 471/94230402 0.0% 84/420 20.0% 3934811 NA +3086 chr4 + 190214555 20177896 20177895 20177946 51 TTAATCATATATATATGTGTGTGTGTGTATATATATATACATTTTTTTTTT chr4 - 94230402 27034821 27034820 27034871 67195532 67195531 67195582 51 TTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTT ..x..:......................:.:......:x:x.:....::.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -6856925 -87373477 +3090 chr4 + 190214555 20177903 20177902 20177947 45 TATATATATGTGTGTGTGTGTATATATATATACATTTTTTTTTTT chr4 - 94230402 27034826 27034825 27034870 67195533 67195532 67195577 45 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCT .........:...........:.:.:.......x...:....::. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -6856923 -87373479 +3285 chr4 + 190214555 20183484 20183483 20183562 79 CATGGTATGTATATACATATGTACATAAATATATATATATAAAATATATATATATACACACACATGCACATACACACAC chr4 - 94230402 67999869 67999868 67999947 26230456 26230455 26230534 79 CATGCTCTGTATGTGGACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGACTTGCAC ....x.x.....:.:x.:.:::....:x........x:..:x.x............::......x:x...x..x::... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -47816385 -46414017 +11713 chr4 + 190214555 20253779 20253778 20254001 223 CCCCCAGTGCCGGCGAGGAAGGAGG----CGGCGGGGAAAGATGCGCGGCGTTGG-------CTGGCAGATGCTGTCCCTGTCGCTGGGGTTAGTGCTGGCGATCCTGAACAAGGTGGCACCGCAGGCGTGCCCGGCGCAGTGCTCTTGCTCGGGCAGCACAGTGGACTGTCACGGGCTGGCGCTGCGCAGCGTGCCCAGGAATATCCCCCGCAACACCGAGAGACTGTGAGTA chr4 - 94230402 16255777 16255776 16256008 77974395 77974394 77974626 232 ctccccgggcc--cgaggccggcgggccccggccgggcgcagcgggcggcgATGATGTGCGCCTGGGGGAGGCTCCCCCTGGCCCTGGGGCTGCTGCTGGTGCTGGCGGGCGAGGCGGCGCCGCAGCCGTGCCCGGCGCAGTGCTCCTGCTCAGGAAGCACGGTGGACTGTCACGGGCTGGCGCTGCGCGGCGTCCCGAGGAACATCCCCCGCAACACCGAGCGGCTGTAAGTA .:...x.x...--.....xx..x..----....x...x:x:::.x......x..:-------....x:..x...x:.....x.x......:.:x......:.x.xx:.::.:...:...:......x...................:.....:..x.....:...........................:....x..x.....:..................x.:....:.... 11M2D12M4I26M7I172M 173/221 78.3% 232/94230402 0.0% 13/221 5.9% 3998002 NA +5855 chr4 + 190214555 20256662 20256661 20256768 107 TTTCTCTTAGGGATTTAAATGGAAATAACATCACAAGAATTACGAAGACAGATTTTGCTGGTCTTAGACATCTAAGAGTTCTGTAAGTGCATCCTCTGTATTTTTAA chr4 - 94230402 16257487 16257486 16257593 77972810 77972809 77972916 107 TTCTCCTCAGGGACCTTAATGGAAATAACATCACCAGAATCACCAAGACCGACTTTGCTGGTCTAAGGCACCTTCGAGTTCTGTAAGTTCTCTCTTTCTATTGCTGA ..:::..:.....::.x.................x.....:..x.....x..:...........x..:..:..xx.............x.x::..:.x....x:.:. 107M 81/107 75.7% 107/94230402 0.0% 0/107 0.0% 3999175 NA +8026 chr4 + 190214555 20257855 20257854 20257973 119 TTTTGCATTTCAGTCAGCTTATGGAGAATAAGATTAGCACCATTGAAAGAGGAGCATTCCAGGATCTTAAAGAACTAGAGAGACTGTAAGTATTTTCAATTCCAAAGTTATGACAACAT chr4 - 94230402 16258675 16258674 16258793 77971610 77971609 77971728 119 TTCTCCGTTTCAGTCAGCTCATGGAGAACAAGATTAGCACTATTGAGAGAGGAGCATTCCAGGATTTAAAAGAACTGGAGAGGCTGTAAGTATTCCTAATCCTAAATGTATAAGAAAAT ..:.x.:............:........:...........:.....:..................:.x........:.....:...........:::...:.:...xx...:.x..x.. 119M 98/119 82.4% 119/94230402 0.0% 0/119 0.0% 3999180 NA +15713 chr4 + 190214555 20259735 20259734 20260125 391 ATTTTCTATTCTACTAAGACTAAGTCAGATGTTTCAGAGTGGGAGGAGGATTTGTAATTCTGAATGAAAACTAATATATATGCAGGACTTCTTTAAATCACCCCAGCTGTTGGCCAAGAGCAAATATTTCATATTTGTGAGGAAAAGCTGAGAAAATTCCTTTTGTTTACAACTGCCAAATCCATCTGATGGAAGCACATTGTTATCTGACAGCCAATTCATTTCCTT-GGACTCTGGAATTCAAAACCATTTCTTAGGAACATTGTGGATACACTTTTCAAATATTTATTTTTTAAAAATACATTAAATGGCAA--------------GGCAGGTTTGCTAAG----GAATGCATT----CAAGTTATTGTGAAACAAACTATTTTAAATTTTGTTCATTGTATTGATTTAAA chr4 - 94230402 16260739 16260738 16261128 77969275 77969274 77969664 390 ATTTTTAAATTTGCTGAAATTCAGTCAG----TGTGAGGTGTGTGGGTGACTTGTAATT-TGAATAAA----------TACGCAGGATGTCTTTAAACTGCCGCAGCTGTTGGTTAAGAGCAAATATTTCATATTTGTGAGGAAAAGCTGAGAAATTTCTTCTTGTTTACAACTGCCAAGCCCATCTGACGAAGGGCCATTGTTATCTGACAGCCAATTCATCTCCTTGGGATTCTGAAATTCAGGACTTTTTCTCAGGGAACTTGTGGGTAC----TTCAAGTGTTTTCTTTT-----ATGCAATAAATAGCAAGTGCTTTAAACTGTGGGTTGTTTTTTAAGATGTAAATGCAGTGTGCCAAGCTACTGCAAAATAATATCTAATGTAGTTCCTTCAATGTGGTAATGGAAA .....:x.x.:.:..:.:.:.x......----.x::::...x.x..:x..:........-.....:..----------..:......:x........:::..x..........::........................................x...:.:.................::........:.:.:.xx.........................:.....-...:....:......::..:x.....:...:.xx......:...----.....:.:...x:....-----..:..x.....:....--------------..xxx....x:....----:......x.----....:..:..::...:..xx.x.xx.:x.x..:x....x...:x.:..xx... 28M4D27M1D8M10D150M1I44M4D17M5D16M14I15M4I9M4I53M 281/367 76.6% 390/94230402 0.0% 47/367 12.8% 3998996 NA +15323 chr4 + 190214555 20262348 20262347 20263163 816 ATGAGTTCAAGTAGAGAATATGTTGTGGAACAGGTCTGAAAGAAAGCATCATTTATCCTGTGTTCATCAAGGATCTGGATATATTCTCTGTTTATCAAGGATTAGTCTCTTCTGACTAATCCGACA-AGTTTATAGGCAACACATAACACATACCTTTTCTTAACAGAATGA----------CAGTCTAACGGTGCTAATCTTCTTGGAAAAGAATTCAAGCCCATCTCAAAAGAATTGTTTTCTGGTATCTTT--------------------CCACACAAGTT-----------------------TAAAATCATGGCAGTCATTTTCTT--GGAAAGTCTCTTTAAAGGACACATCAAACTCTAACAGAGGCTGAGTATGCACATAGC-------ATAAAATATAAGTGTTCCAAAAGA--TATAATAGCCA--TTATATGCCAATGATGT--TCACCTATTCGTAAGCAATGT--GGTCAATTTTAAATTAGGTTTACTGACGCTGGTCATAGAAAGCTTT---AATCCCTGTGCGCTGT---TACAAGTTTAGCAGAACATTGAATCCATCTGAGAG-AATTTCTCATGCAACAGTTTTTATGGGCCTTGAAGTTTAATGGTGGTGAGAAGGCCCGTTTGCTCTTTGTCGACCATTTTATAAATTCTGAAGCAGTGAGGGTGTTTATTTTTCCCACATCTGTTTTGGG-TCCTCTTTTGTGACAGTGTTTGCTGGATGCCGTGTCCTTTATACCTCCCCTGAAATGAGTAGTTTAGTTTGCACTGTTACAATGTATTTGTGGAAGCAGCCAGTGTCAAA---TATTTTACA----TTTAATTCCCTCTCTCATTTCTTTTGGATACCTTTCTGCTTGAATTGTGTCTTCTAGACTGA chr4 - 94230402 16266628 16266627 16267467 77962936 77962935 77963775 840 ATGAGTTCAGGTAGGGAATACGTTTTTGAGCAGCCCTGAAGGGGGTGAACAGTTATTCCTTGTTAATCACGGATGTGAAAA-ATCCT--------------------TCCCTTGGCTAATCCTACATGGTTTAAGGGCAATGCAGAGTGCATTCCTCATCTTAGAACAGGGAGGAGATCACGAAGCCTG-CGGTGCTAATCACTTACCAAAAGAATGTGAGACCATCTTACAGGAATTGTACTGGGGCATCTGTATTTATAGTTAAAAAAAATACTACAGTAATTATCCTGTATTAGCATACTTTTGTTGAAATAGCTTCAGATATCTTCTCTAGGAAAGTTTCT------GGTAAATCAGAAATAGACAAAGTCTGTCTTTGAAGATGATTATTTAAAAAGAGAAGCAGTGTTGTAATAGCACTATAAAAATCAGATTATATGGCTACGCTTTGATTGCAGAATAATACAAAATATTTGATAAAACT---GTTAAGTCTG--AGCGATGTTCTT------CTTTTGAAATCCTTGTAAACTTTCtttattatttt--taatatattttaCTCATTTGAATGTAGTTTCTCATGGGATTCCTTTTGTAGGTCTAGAAGTCAAATTGCAGTGAGAAGTCCTGTTTGCTCTTTGCAGACCTTTTTACAAATTCCAGGGCAGGAAGGCTGTTTATTTTTCCCACATCTGTTTTGTGCTCATCCTTTGTGACACTGTTTGCTGGATGCTCT-TCTTTCTTGCTTCTACTGAAATGGG-----TAATTTGCACAGTTGCAAAATGTT----GAAAC---------CAAATCTTATTCTACAGAACTGTATTTTCATCATT--TTTCTTTCAAATAGTTTTTTGCATTCAGAATACATTTTAAATTGA .........:....:.....:...x.x..:...x:.....:.:::xx.x..x....:.:x....x....x....x..:.x.-..:..--------------------..:::..:.......x...-:.....x:.....::..x.:::...x...:x.....:x.x.:x..----------x..:..:-...........x::.xxx........x::..x......:.x.:.......x:.xx..:....x.--------------------.:...xx.:..-----------------------.:....x::xx...x:..:....:--.......:...------.::.x....:.xx:x:...:..x...xx.x..x.x..:::-------.x.:.:x.xx......x:..x..x--.....x.::..--.......x.x.:.x.x.--.::.xx.x.x:..x:x...:.--.:.x..x:.---:...:..:.:--::..x..x..x.------....---.....:...:x:..x.---..:x.x...--:.:x.:...xx.::...:...:x.-.:.........x:.:xx:....:.:..:..x.....:x...x.::........x..:............:x....x.....:......::::....x:...x..........................x.-..x..:.........x..............:x.-..:..:x.:.:..:x........:.-----..:.......x...:...x:.:..----...:.---------....---....:....----.x..x..:.x..x:.--.......:::...x:...:...x.xx.xx:.::x..:..:.:... 81M1D5M20D19M1I45M10I7M1D64M20I11M23I24M2I11M6D40M7I24M2I11M2I17M2I21M2I9M3D10M2D12M6D4M3I16M3I9M2D24M1I130M1I33M1D25M5D24M4D5M9D4M3I9M4I15M2D45M 515/754 68.3% 840/94230402 0.0% 148/754 19.6% 3995720 NA +7478 chr4 + 190214555 20268775 20268774 20268914 140 ATGTAACATAAGCTTTGTTTTTGTTTTCTCAAAAGGCGTTTAAACAGAAATCACCTTCAGCTGTTTCCTGAGTTGCTGTTTCTTGGGACTGCGAAGCTATACAGGCTGTAAGTAGACACAA-ATAGTTATTGTTGCTTTGG chr4 - 94230402 16274422 16274421 16274560 77955843 77955842 77955981 139 ATTTAACACAACCTTTTCTTTT--TCTTTCAAAAGGCGCCTAAACAGAAATAACCTCCAGTTGCTTTCTGAACTGCTCTTTCTGGGGACGCCGAAGTTATACAGGCTGTAAGTAGGCACAATCCAGTAACTGTTATTCTAG ..x.....:..x....x:....--.:.:..........::...........x....:...:..:..:....::....x.....x.....xx.....:..................:.....-x:...x.:....::.:.:. 22M2D97M1I19M 108/138 78.3% 139/94230402 0.0% 3/138 2.2% 3994353 NA +34017 chr4 + 190214555 20271744 20271743 20272327 584 TTGATTTTTCGCATTGTTTGCTTAGATTAAAGCTAGTTGGATATACTGGACATTG--TGTT----GCTTTTCTTTGAGCTT-TGGAATAAATAATCGCCCTTTGACTAGTGGTTGAAAATAAGATGCCAGGGGAAGAAGCACACATGCTTTTCATGGACTCTAAATGCAATATAAAAGAAAAGGAGGGTATACTGTATATGAATTATGATTCGACACACTTGGTTGCTGCTAGCGGCCAAATATGCTTTTCCTTTGCTGTCTGCTCCAATTTCTCTTTGGACGGGTTGAGAGAGCACTACATGTTCAGGTCAAGATGTTTGCTCAGAAATAGTAGTACAGTTGCAGCTGTGTTTGTTGGAGTAGGAGACTAGTTTAAATAGCATTACCATTTATCCAGTCCATTAACAGAACTCTGTAAAATAATACCAACTCTGCATAAACTACAGGACAGTGTAATAAAATTACAAGCACTTGTTGACAGATGGAAAGTGCAAGTCCAGGGAAACTAAAATAAGGGACGATAGGTTGGAGGTTAAAAAAAAAAAAAATAAGCCAGCATGAAGTTTTCTTAACTTATAGACTCTATCTTC chr4 - 94230402 16276543 16276542 16277097 77953306 77953305 77953860 555 TTTATTTTTGGCATT-----------TAGCAGCTAATCAAACATTGTGTGCACTGCATGTTTTCAGCATACTATCGAGCTTCTGTGAATAATAATTACCATTTGACCCTTGGCTGTAAATGAGATGCCAGGTGAAGAAGCACATATGCTTGTTGTGTAGCCTAAATGCAATATAAAAGAAA--GAGGGTACACTGTATATGAATTATGATTAGACACAGTTGGTTGCCGCCAGCGGCCGGCTATGCTTTCCCTTTGCTGTCTGCTCCAATTTCTCTTTGGACGGGTTGAGAGAGCACTGCATGTTCAGGTCAAGATGTTTGCCTAGAAATAGTAGTACAGTTGCAGCTGTGTTTGCTGGAGCAAGAGACTAGTTTAAATAGCATTACCATTTATCCAGTCCATTAACAGAACTCTGTAAAATAATACCAACTCTGCATAAACTACAGGACAGTGTAATAAAATTACAAGCACTTGTTGACAGATGGGAAGTGTAAGTAAAGGAAA-------------GCGATAGGTTGAGAGTTTAAAAGAGA----------CAGTGCATTATTTCCCATGTCTGGAGACTCTATTTTC ..x......x.....-----------.x:x.....:.:::.:..xx..x:..:..--....----..x.x::x.:......-..x:.xx......::..x......:xx...:..x....:..........x...........:......x.::..x.x:.....................--.......:....................x......x........:..:.......::x........:................................................:.......................::...............................:.....:.:..........................................................................................................................:.....:....xx...:..-------------:..........:::...x....:.:.----------...::::xx:...:.:xx:::.:x.........:... 15M11D29M2I4M4I16M1I99M2D322M13D26M10D37M 462/548 84.3% 555/94230402 0.0% 43/548 7.8% 3995201 NA +14699 chr4 + 190214555 20273784 20273783 20274043 260 GAGGAGCCCATGTACAAATTTCTCTTGAATTAATTTCTGCCAGCTCTGATTAAAGTGTGGACTACTAGAGATGTCAGGTGCCATCGTTTCCTGCTTCATTTTACTCTTGGCCTGTTTGGCCCCTGCCACAATAAATCCGACTGTGATTGTGCAGGAATTGCAGGTTACAGTTGCTACGGTTACTGTTGTTCAGCCAGACCGACATCATTACTCATCTAGCGCGCTGCCATGATAGCTACCGCTGATTTCTGTTGCTGAGA chr4 - 94230402 16278090 16278089 16278337 77952066 77952065 77952313 248 GGGGGGCCCTCGCAAAAATTCCTCCTGAATTAATTTCTGCCAGCTATGATTAAAGTGCGTGGTACTAGATGTGTCAGACACCATAGTCTC-TGCTTCATTTTACTCTTGGCCTCTCTGGCCCCTGCCACAATAAATCCCACAATGGCTGGGCAGGAATTGCAGGTTACAGTTGCCAGGGTTACCGTTGTCCAGCCGGGCTGCCATCATCACTCATCC-GCCCGCTGCC----------CCGCGTGCTCCTGTCGCGGGGA .:..:....x:.:.x.....:...:....................x...........:.x:x.......x:......:::....x..:..-......................x.:......................x..x:..::..x........................:.x......:.....:.....:.:.:.x......:.......:-..x.......----------....xx::.:....:..x.:.. 90M1D126M1D10M10D22M 201/248 81.0% 248/94230402 0.0% 12/248 4.8% 3995694 NA +62463 chr4 + 190214555 20276302 20276301 20277530 1229 TTACCTATAACTG------AGTTGATTATAATCACTGAATTTTTTCTGGAGGGTTAACCTTAAAATATTTTATAAATTTTGATATAAGAAACCTTT-GGATGGAAGTTTTAAAAGAAACTAAATCTTAGAGAAGGAAGCAGTGAAGAGTAAAAAGACCAGTCCTTGACAACACCTATGGCCTAGGGTACAGCATAGAGGTGTGAAATGTTATT----AAGAGAACATCTGTGTCTCTTGAAACATCCCCCAAATGAAAGTTTATAGCAAAGTATGGCAACTTGATTTAAGTGTTAAAAACAAAACAAACAAACAAACAAAAACTTAAAAGAGAAATAAGTAAATCTGG---AAACAGAATTGGAAAAAATAG---CTTTGCCCCATCATGATAGGTTTCTTCTGCTAGTGAAAGATTAAAGCTCGAAGTATGTGAATAGCTGAGAACAGCACAGAGAAAGGTTGATTGCTTCCCCTCCGACAGTTCCAATTGATTGAAAAAAGCCTAATTTAAAGTTCTGTTTGTTCTATGTCTTAAACCATCAGAATTCTCTTTTGGGACCTGAGGAATGCTCTGGAGGAAAAAGAATCCAAGGATAAAAAGTCATTGCAAGCCAACAATTGTTCCTAATCCTCACAAAATGCTGGAGAAATTAAATTTATTCTTTATTGCTCAAAGTGTTACCTAGGTCACTGGGCGATGGGAAAATTGGACTGGAAGTCGAGTAGGCGCAAGCTTTGTTTTGTGTCTAGATGCTTAACCTTAGACACGACAAGGCATCTTAGAGTGTTGTGGGAACTTGGTTCAGAGCATTAACACCAAGACTTTTATTACCCCGGATTTATAATAGGCTGTGCTGTCAGGAGATGAAAATGTTGTGTTTACATTTCAGTGTTAAATGATCATTTAATTAACACCTAAGG----------GGAAAAAAAACTTGTGAAATTCTTAGCAGCTTTTATTGTTGGTTTCCTGGGAGGTTTTAATATCCAAGTTTCATTGAGAATTTTTTTGTAAGTAAAGACACAAAAGACA-TTATAAACTT-TTTAAGGAAGACAAACAGTTTAACC----TTGACCCTTTA-AAAAAATATTAATTTAAA------TTAAATT--TTAAATCTGGTGT---TCTTCTCATAAGTTTCT------AGACTAATATATTAAAATACATTTTGA-------TTGGACACTACTTTTGTGTAAACAGTATATAAATATGATTGAATTTACATTATACATTTTCTAGGGTAAAACATTTGAAATTACTG chr4 - 94230402 16281073 16281072 16282337 77948066 77948065 77949330 1265 TCACCTGTAACCGTATTATAGTCAGGGTTAGTCTCTGAGATTTTCCTGGAGGGTTAACCTTGACAGGTTTGGTGAATTGTGATATAGGAAACCTTTTAGGCAGGAGTTAAGTAGGAAACTGAGTATCAGTGACGGAAGTAATGAAAAGTAAAAAGGCATGTCAGGGGAAATGCCGTTATTATGTGGTGCAGAAACGTGGTGTGAAATGTTATATATAAAGAGGACATCTGTAAGTCTC--AACTTGCACAGAGTGGACATTTA-AGTGAGCTGTGTCATCTTGATTaaa-----aaaaaaaaaaaaagaaagaaaagaaaaaa--GATGGAGAAAGAAATAAATCAGGCCAAGGGAAAATGTGAAAGTATAGAGACTTGTCCCTATGACGGCAAGGTTCTTCGGCGAGTGGAAGATTAAAGCCTGAAGTAACTGAATAGCAGAGAAAAGTCCAAAGAAAGGTTGATTGCTTCCCCCCCAACAGTTCCAATTGATTGAAAAAAGCCTAATTTAAAGTTCTGTTTGTTCTGTGTCTAAAACCATCAGAATTTTCTTTTAGAACTGGTGGAATGCTCTGGAAGAGAAAGAATCCAAGGATAAAAAGTCATTGCAGGCCAACAATTGTTCCTAATCCTCACAAAATGCTGGAGAAATTAAATTTATTCTTTATTGCTCAAAGTGTTACCTAGGTCACTGGGCGATGGGAAAATTGAACTGGAAGTCGAGTAGGCACAATCTTTGTTTTGTGTCTAGATGCTTAACCTTAGACATGACAAGGCATTTTAGTGTGTTGTGGGAACTTGGTTCAGAGTATTAACACCAGGACGTTTATTACCCTGGATTTATAATAGGCTGGGCTGTCAGTAGATGAAAATGTTGTGTTTACATTTCAGTGTTAAATGATCATTTAATTAACACCTAAGGaaaaaaaaaaaaaaaaaaaaCTTGTGAAATTCTTAGTGGCTTTTATTGTTGGTTTCCTTGGAGGTTTTAATATCCAAGCTACGGTGCAGTTGCTTCTATAAGTAAAGGCAGAAAAGACGTTTATGAATGTAGTCAAGAAGGACAGACAGTTTAACCCCTGTTGACCCTTCATCCTGAATGTTGATTTATATAGCGTTTAAATGCATTGAATTTGTTTTAAAGCTTCTCTAAAGTTACTCACTTAGGAAAAAAATGTTTGAATGCTTTTAAAGCATTTCCTGAATTGTACATGCTTATAAAGAGCATAGA---------GAATTCATGTGTTTCAGT---CAAAAAAAAATACTTAAAATTCTTG .:....:....:.------...:::xxx..:..x....:x....:................:.x.x:...x:.:....x.......:.........-:.:::.:....xx:x.:......:.:.x.:..x..x.....:.:....:.........:.xx...xxx.:x..::..xx.:x:x.:x...:...x.xx.x...............x----.....:........:xx...:--...x.x.x.x:.:..:.x:....-..::.:x.:..x..x.......x..-----.....x....x..:x..:x...x.....x--:.x:......x..:......x..---.::x.:...xx....:x....---...xx...:..x.:.::.:.x......x..x....:...........::......xx........x.....x..:x..:.....................:..:.................................................:.....x..............:......:.:..:x.x.............:..:.............................:...................................................................................................:..................:...x..................................:..........:....x........................:..........:...x..........:.................x........x...........................................................----------::........................::....................x...................:.x.:x..x::x.x:..:.:.........:..x.......:-....:..:x.-x.:...:.:....:...........----.........:.-xxx:...:..:.....x.------......x--..:...:..x.x.---x......xx.....x..------:..xx..x..:..x:...:.x...x:.-------:..:.:xx...x.x:x.:....x..:...x.---------.....:.::.xx.x..x.---:.:::x....:.:..:.....x:.. 13M6I77M1I116M4I21M2D23M1D25M5D29M2D23M3I21M3I548M10I109M1I10M1I25M4I11M1I18M6I7M2I13M3I17M6I27M7I31M9D18M3D25M 965/1207 80.0% 1265/94230402 0.0% 80/1207 6.6% 3995229 NA +3276 chr4 + 190214555 20280334 20280333 20280399 66 AAAAAAAAAAAAAAAAAAGAACAACAACAAAAAAAAACC-----AAAAAGCTTTCACTAGTTACATTCCTA chr4 - 94230402 75231114 75231113 75231184 18999219 18999218 18999289 71 AGAGAAAAAAAAAAAAAAGAACAACAACAACAAAAAACCCTAAAAAAAAGCAGGCATGGAGAAGATTCCTA .:.:..........................x........-----.......xxx..:x::xx.x....... 39M5I27M 53/66 80.3% 71/94230402 0.0% 5/66 7.6% -54950780 -39279622 +3651 chr4 + 190214555 20291430 20291429 20291516 87 CTGCTCCTAAGAAACCTCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735329 92735328 92735403 1495000 1494999 1495074 75 CCACTCCAAAGTAACCTCTTGCATATCTATATGTATGTACACATATATATAT------------TTTTTCTATTTTTTTTTCTGTTT .::....x...x......x.::....x.....:...:..:.:..........------------.....:.x.........:.x... 52M12D23M 59/75 78.7% 75/94230402 0.0% 12/75 16.0% -72443899 -21786503 +3008 chr4 + 190214555 20291450 20291449 20291503 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 11609520 NA +3222 chr4 + 190214555 20291452 20291451 20291505 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 11609522 NA +3014 chr4 + 190214555 20291454 20291453 20291512 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -22466401 -71764001 +3388 chr4 + 190214555 20291456 20291455 20291509 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 11609526 NA +3282 chr4 + 190214555 20291463 20291462 20291518 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -72443885 -21786517 +3068 chr4 + 190214555 20291465 20291464 20291520 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -72443883 -21786519 +3126 chr4 + 190214555 20291465 20291464 20291524 60 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 4200274 4200273 4200333 90030070 90030069 90030129 60 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGTTA ..x............:.:.:..............::...:xxx.......x...:xx... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 16091191 NA +3037 chr4 + 190214555 20291467 20291466 20291539 73 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGCAATGCTATGTG chr4 - 94230402 92735348 92735347 92735420 1494983 1494982 1495055 73 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTG .::....x.....:...:..:.:....x.x.x......:.x.........:.x...:x.x.x.x:x.:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -72443881 -21786521 +12007 chr4 + 190214555 20296299 20296298 20296635 337 TAAAGCAATGATCTG----AACTAGA-----AAAAAAAGTTTTAAAAATGTAAT-TTTTCAGTTACACAAAAGTTACCATGGCATTACCTTTCCTTT--TGTGTCTGTTGGTGA-TTTAATTTAGTAGTTTTAGAAAATGTGTCTATTGCTGTATTTAAAAATTCTAATTACAGCAATTGGTAAAGAAGTTTCCAAGTACAAGGGG-TATTTGTAGAGAACCTGTA-GGACTGACAAGTGATTGACAG-GTAAACAACCCCACTGTGGCCTTATATTCCATTCTGTGATGTTGGACTATAG------ATACTACATAAGCCTCAGGAAGTAACCACCTTCCAATTTTTATTAAATGCTT chr4 - 94230402 16292783 16292782 16293119 77937284 77937283 77937620 337 TAAAGTAAGTATCTGTTTTAAGTAAATGACCAAAAGAGATTTCACA--TGTAACATTTCCATCTGCACAAAGGTAACCATGACATTACTTTTTGTTTCTTGTGTATGTTAGTGGCTTTAATTTAGTA-----------TG-GTCTATGATTGTGTT-AAAAATTTTAATTACTGAGGTTTGTGAAACTACTCCCAAGTACAAGGGGGTATTTGTAGAAAAC-TGTACAGATTGACAAGTGATTGACAGAGTAAACAGTCCCACTGTGTTCTGATAT------CTGCAGCATTGCACCACAGCATGGGATACCACATAAGCCTCAGGAAGTAGTTGCAATCCTATTTTTATTAAACTCTT .....:..xx.....----..x..:.-----....:.::...:.x.--.....:-...:..x:.:......:..x......:......:...:x...--.....x....:...:-............-----------..-......x::...:..-.......:.......x.x::..x..:..:xx::.:..............-..........:...-....-:..:.................-.......::.........x:..x....------...:::::...x..:.:..------....:...................::::.xx...x............:x... 15M4I7M5I15M2D6M1I42M2I15M1I12M11D2M1D15M1D49M1I14M1D4M1I21M1I27M6D19M6I52M 248/315 78.7% 337/94230402 0.0% 44/315 14.0% 4003516 NA +3106 chr4 + 190214555 20307096 20307095 20307148 53 ATTTCTTTCCCTCCCTCCCTCCCTTCCCTTCCCTCCCTTCCTCCCTCCCTCCC chr4 - 94230402 83554930 83554929 83554982 10675421 10675420 10675473 53 ATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC .......::..:....x......::.:.:.:.:.:....:...:..:.:.... 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% -63247834 -30982568 +3117 chr4 + 190214555 20307807 20307806 20307875 69 TCTCACAGGCAGTAACTTGCCCAAGCTCACATGGATAGTGTGAGGCAGAACTGGGATTTGAGACCCACT chr4 - 94230402 1150759 1150758 1150827 93079576 93079575 93079644 69 TCTGGCATGATGTAACTTGCTCAAAATCACATCGGCAGCCTGAGGCAGAGCCAAGTTTTGAAACTCTCT ...x:..x.xx.........:...:x......x.::..:x.........:.:::.x.....:..:.x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 19157048 NA +29930 chr4 + 190214555 20317956 20317955 20318447 492 TTTTCCAAA-ATGCTGATATGTTTTAATTTAATGATGTGCTATTTGGGG--TCCATTT-------TTTGTACATTCATCATGATTCTAAAACTGAG--TTTGGATGAAAAGCATGTAGTGCTTGCCTTGTTCTTACATCAGAAGAATTTTTTCTTTTGTCCATTTTATGCTTGTTTCCAAAGGCTTAAAATGAAAGCTTTGTTTCTGCAATAATGGCTTAGTGTAGGCTTACATTGTTGATCCCCTCAGTAGATGCAATGTAATCCACTTTGGTAATGTGAATTTTTAAACAATCATCGGCCTCTGCCATTAACCCTTCTCTGCTAATGATAATACTCTACAAAAACTACAAAGAAGCTCGGGCCT--AGCTTAACATTAGACTTGGAGCGCACTTAGCTGAATTTGCATTTCTTATTTTAGCAGCAGTGAATTGCTGAGCATATGTTGAACTTCATCAATACCA-----AAAGTAGAATAGGTGATTGTGAAACTAATGTTCAAGTGCAA chr4 - 94230402 16312620 16312619 16313130 77917273 77917272 77917783 511 TTCTCCAAGTATGCTGTCTTCTCAGGAGTTCATGATGAGCTTTTTGGGGAGGCTATTTGTACATTTTCATGTGTTCTGTATGGCGCTGAAAATGAGAGTCTGTATGAAAAGCATGTAGTGTTTGCCTTGTTCTTACATCAGAAGAATTTTTTCTTTTGTCCATTTTATGCTTGTTTCCAAAGGCTTAAAATGCAAGCTTTGTTTCTGCAATAATGGCTTAGTGTAGGCTTACATTGTTGATCCCCTCAGTAGATGCAATGTAATCCACTTTAGTTATGTGAATTTTTAAACAATCATCAGCCTTTGCTATTAACCCTTCTATACTAATGGTAATACCCTAGAAGAACTACAAAGGAATTTGGTGCTCAAGCTTAACATAAGACTTGAAGGACACTTAGCAGCATTTGCATTCCTTAGTTCAGCCACAGTGAATTGCAGAACTGATGTTGAACTTGATTGGTACTGTATTCAATATAAAATAGCTGATTGTGAAGTTGATGCTGAAATCCAA ..:.....:-......x:x.x.:xx:.x..x......x...x.......--x.:....-------..::.:::...xx:...::x..:...x....--.:..x.................:.......................................................................x..............................................................................:..x.......................:....:...:............x.:......:......:...x..:..........:.::.:..xx..--..........x.......:..x:........x.x.........:....x..:...x:...........x..:.xx...........x..:::...::-----..x:..:.....x..........::.:...:.x..:.x... 9M1I39M2I7M7I31M2I268M2I97M5I41M 410/492 83.3% 511/94230402 0.0% 19/492 3.9% 4005336 NA +3226 chr4 + 190214555 20345488 20345487 20345538 51 TTTCTTTTTTTTTT-----CCTTTTTTCTTTTTCTTTTTCTTTTTTCCTTTTTTCT chr4 - 94230402 33215681 33215680 33215736 61014667 61014666 61014722 56 TTGCTTTTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCT ..x..........:-----.......:................::..:.....:.. 14M5I37M 44/51 86.3% 56/94230402 0.0% 5/51 9.8% -12870193 -81360209 +24773 chr4 + 190214555 20354270 20354269 20356919 2650 TGCTCTCTATTGTTGTCTTTCTCTTTAGAAGGTAATTTGTGGTCAGTGGAGCCCAGCAGGGAAGCTCCTTCTCCTCCAGATGGCAGTGACATTTGAGAAAACCTTGGAGGATTAAAGACACTCTAGTGAGCACTCACTGCAAAGTCCTGACACAATTTGACAGTCCTAATCTGGGTCCTCAACTGATTGGATGACCAAGGGCACAAAATTCTCA----TCCAACTGTGCAATCACCAGGCACATTGTTAAGGGCAC---TAAAAA----------------------TGT-TCCAAAGTTTTGGTGACTGTTTTAA-------ACAAAAATATATAAACCTTTTCTTC--ATGGCATGTTTTTGGAAAAGGTCTTGGAGGTACCTTGCATGGCTTTTAAAAACTGACTATATTTTTGCATGAATGAGCACAGCATGCTATAAATGTCTTTACTCTTTATTAAGTAGGGTTTGCAAACAATCTAAATGGTTAAATGGTAGAGGAAACTATAGAAATTGATCTCAGTGAGCAAAGCCTACCAAATCTAATTATATATTGTCACCATCTGCTGCAATATGATAACAGAATTA---------ATACAAT-TACTTTGAGAATTTTGAAGAAAAAACTTTTGAAAAAAATGGACACGTGTGGCAAGTCTGCGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA---------GCAAGGGCAAGAAAAAAATGCCATCTTAGCTGTTCTTTCTTTTTCTGTTTCTTTTTTACCTTTCCTCATTTTTAAGTTATTGCTTAAAATGATTTGA-AATATGTTTTCCTAATTTTCGTGTTGATTAAAGTTATCAAGTTTTGG-TAAGGTGATTTTATGGGTT--TGGAATTTTAATTATATCCACTGCAGCTTCTAAAATCACCATGGCAACAGGTGTGTAATTA-TCAACATTGCACATAGCTTCAATGTGTAATGCATTTCTTCTGGCTGAATGAATATTAAATCATAC---------TGCTTAACACCTCCTCTACTAGTAAACAGATAAGGCTTTGGCCATGGCTTGCAAATTGATCTTGCT--TCTGTAGATTTCTATTACTGCAGAGCCATTGAATGGGGTAATTTGTGCCTTTGAGG--GTTTTCTGACTTTGCTAGAGCATGACAGAAAGTCCAGTTTTATTTCATGTAATGAGAAAAAA-AACATGTTTAA---TTATTACTCACATTTCCATTAGTAGAATTCTTTCCAAGAGAATATTCTCCTTATTGTTTTCCATTTCAAGGTGTGTATTCAGGACAGATGAGATTTTTTTAAAAAAGACATTTTCTTAAGGAAAGCTTACATTTTAAATGCTACTTTTCCTAGCAAATGCAGGTGGTCATTGTATGAAGCACATATGAAATGAAAC-CTTTGATTTAATACCAAACTATAGCCTACTGTCAACTCTAAGAAAACTGTATGATCCATAATTTTAAGTAAACCAAAACTTTA-------------CTTTGTTTCT-AATATTCCAGGTGGTCTTTTCAGACTGATATCTATGTAGAAGTACGCAAGAAAGTGACGTGATTATCTGATTATCAGATTATGTTTATAT---GTCTCTGATTGTTATCAAGCTCAAAATTTTCCTTAAATAGCTATGGAAAG---AGATAGCAGTTTACTACTACTACTATTATTATTAGGTCATCTAATGTAATTCAATTTATAAATCTGATGCATACATTTGACTGATAGGATACAGACTTTTAAGGACCTAGCATTATAAAAAATATAATTTAAATA-CATAGATCAAATAG-----AGCCATATATAA--TATTGTTAAATAGGGAACAAGATAAATGATTATGAAGATGTATAGATCTTTTAATCATTCAGTG----TTTGTTTTTAGTGGACATTTTATTTTGGGATGCCATTCAGTAACTTGAAGTTATTAAATGAAGCATAATCAATATTAGAACAAAAGCCAGCATAAGAAGATTTATTTAAATTTGATGTATTTAGAATTTGGA-----GTCTGGTCACTAGAATTTTGAGGCTAGGTGATTCTATGAAAGGCTGTATGTAACCACCTTCTACTCTATTCCTTCCTCTCCACCCAGGTCAAATATCCCAGAATATGGTATTATTTAAGTATCATCAACTTTTAATTTTAGTGTGTTTCCATTTTCAAACTAAGAC----AGGTGCAAAGTTGAGGT----------TACCAGCGGTACAA--------------GATCAGATCACCTAGTTAGATATT-GATGCATAGTAAAAT-------------GTAGCCTAACA-----------CACTC-TATTCATAATGTGGATTGACAACTA-AGAAAAAAGT-------------GAATGC--TTTATTCACACAAATAGGTTAATATTCCTGAAATAGTGTCCAATGCATTTAAAGCCATTTAAAAGAACATAGAGAATACAT-TATTTTTCTT--------------AGCTTATTTCTCCAGTATTTCT--CCCTGTATTACTCTAGCTCATATTTAGACTTTTTGTTAATCTTAGAAAAAGGATAAACACACACAGTGTATTTCTGCAGACTCCCCTTTAATGGATCTCTGCCAGTGTTAGCCATTGTTTCAGTTGCCTGTGGCTGCTCAACTGTGCAAGGTTGCCTGGAAACGCTCCTTCTTCAGTGCAAAGCTCTCCGGCCACTTTCC-ATACCTCCCAGCCC----------AGGGCTTAAAGATTCAG----GGACTCCAGCCACTGGTGTTTCTTTTTGAAATCTCCTTAG---TAAACTAATGATCTTGTAAATGTAG chr4 - 94230402 16328773 16328772 16331266 77899137 77899136 77901630 2494 TGCTTTCAATTGTT-TTTTTCACCTTACAAATAATTTCGTGGTCAGTGGGACCCAGCAAGGAGCCTCCTTTTGCTCCAGATGGTTGTGACATTTGAGTAAACCTTGGAGGATTAAAGGCACTCTAGTGAGTACTCACTGTAAACTCCTGACGCAACATGACAGTTCTAATCTGGGTTCTGGGCTGATTAAATGGCTATAAGCTCAAAGAACCAAAAATTCCAACTGGGC-ATAAACATTTACATTGATAAAAATACACTTAAAAAAAAAAAAAAAACCCAAAGACATTGTATCCTAACTTTAGTCAAAAGATTCAATATACTTATAAACATATGTAAGTTAAGTTTTCAAATGTGGTGATTTACCAATTTGCTGTACAGTAACTTCAC----TTTCTGTAAAGCTTTTCTGCGTGTGACTGAATGAGCACAGCGTGATGCAAATGTCTTTTCTTTATATTAAAGATGGTTTGCAAACAATCTAAATGGTTAAATGATGGTAGAAAATATAGAAATTGATCCAAATGAG---AGTCT--TAAACCTAATTATGCATCATCACCATCTGCTGTAATAAGGTAATAGAAATATGTGGAAAGATACATTCTACCTTT---GTTCAGAATAGGA-------GAAAAAAA---------ATGGCTATTTTCCATTTGT---------TATGCAAGA---------------------------------AGAATTCATTTACTTAATGGCCAACTGATAATA-------AATTGTTTTTTATTGTTCCATG----------------TGATTCTAAAGATTTT----------ATTTGATAATATATTATTTTGAT-------TTGATTAAAACCAGAAAATACAGGTTAACATTATTCTTTTTCCTCGTGAAATTTAAGAAGTAT--AATGAACTTTCTGAAAATTGTGTGGCAATAG--TTGTAGTTATTCACTGTTACGC---GTTTTAAAG-GTAATTTATTTGTTTTGCCTGAATGAGTGCTAAATTGTACCAGGAGAGGTGCTGAGA------------AGTACAAGAGTAATGCTTCAGCCACAGCTTGCAATTTGATCTCGCTTATCTATACGTTATTTTTTTTGTGTGACAACTGA-----GTAATTTGTTTCTTTGTTGTTTTTTTTTAAGTCTATCAGAGCATGACAGTCAGTCCAGTACTTTTCTTTCAAAGGAGAACCAGTGATATTTTTAGAGTTTGTACCTTTCCCAACCCTT-------TTCTTCCCA----GATATTTTA--------TCTCCCTTTTAACATGT---------ACTGCAGAAATTTGCCCATGAAATAAATATGCTTG---------------------GTAATTTATTCTAAAAAATGTA-------ATTTTATTGATGTTTCAGAAAGTTAACTACAGTGCTTAAAGACAAATTCAAAACTAACAGTAGCACCTAA------TGTAT--TGCAAAGTTTT-AGTAGTACAAATTTTTGGTGGTATGTGATCTTGTGTTTCTGAAAAATTCAAGAAATCCTTCTGGGTT-ATGTCTGGGCATTTGCTGACAAGAAAGCCA--------------------------TTTACATAGAGCCTCTGA--------GAGTTCAAAA--------------------AAAGTATAGTTAGAAGATT----------------TCACTAAATAACTTAATCTAAATTATTT-------------------CTTCCC-------ATACTGATTTTT------TTTTTCTTATAAAGATTTCAGTTAAAACATCACGGTTTGTTTAGTTTAAAGGCTTATGCAAGTTGTTCTTTAATATTA---AAGGTAGAAAACTGTGGGATTTCATA-----TCAAATTGTCCCATGCAACTTTAATTATAATGCATTGATTAAAAAAAAATGC--TTTATGAACTGCA--TAATTAA---AAGCATACTGTAAGAAAGAAAAGAAA--AACAAAACAAAA---ACTTTAGTTCACTATATTGTTGATTCTTATACCTGTCTTGTAACTCGCGGTCTAAAACCA---------CTGAGTAGCTGTCTGGCACC----CAAGTTGCATCTCTTCCAAACCACC---ACCAATTCACTCAGA---------TGTTTGGCCTGGATTTCTTTTAAATTTTGCCGAA--TCCTCTGTAAGCATGAGATGATAATGTGAAAAGTCCAAGTCTGACTTACCTAGCAAGGATCTAAATTACAGTTTTAAGGAACTAAGCAGCTAGTTGGTTGTGAGATTAACTGGAAGTTTCACTAAACCTTGTTATCCTCACAGGTCAGGGCTGCACTTAGATTCCAGATGTACTTGAAATATTGCAGTACAAAGTTTTGTATTTTAAGTGATGCTTTTTGTTTTTAATTCTTGCCCTATATT-CTGCAAGAGT------TGAAGTTAAAACAATTTGAAAAATCATTCAGCCTGCCCATGTCTCTGTTCACCCCTATATTGAGGTTTGTTTTTCTTTTATTTCTGATCCTAT-TTAATGTAGCCTGTATTTA----------TAATCACTGATGGTGGGAATACA-----ATGGTGTTGCTGCAAGCTTCCCTTTAATGGCTCCATGCCAAAGGTAGCCATTGTTCCCATTGCTTGAGGGTGTTCAACTGTGCAAGGTTGCTTGGAAA--CCCCTTACTGAGTG--AAACCTTCCAGTCACTCTCCTCTACCTCCCAAGTCATAGCATTTGAGTGCTTAGGAATTCAGAGGAGGATCACAGTCAGTGTGGTTGCTGTTTGTGACCTTTTTGATGCTAAACCAATGACCTCTTAAACGCAG ....:..x......-.:....x.:...x..:xx.x..:...........::.......:...:x......:.x..........:x............x...................:............:........:...x.......:...:x.......:...........:..x::......::...:.:.x::..x....:xx.:x.----........x..-..x.x..xx:......x...::::..---......----------------------...-...x..x...x.x::.xx.x..:..-------.:...x....:...:::xxx.:...--...xx:..x...xxx..xxx.::x.:x..xx..:.::.----:..:.:x...x:xx:.x.::x.x..xx..............:..x.::..........x..:.x......:x.x.............................:.:.x:....x..............:x.:....---..:..--:...:........::..::.............:....x.:...:....x..---------.....x.-...:..x---:..:x...x.::.-------........---------:....x.x.:.x.:.x...---------.:..::...---------------------------------....---------x:..x...x.:xx:.x...:-------.::....:...x..x...::.x----------------.x...:.x...x.x..----------......-.....:..x.::.:..-------.........:::.xx..:.x:x..-...x:.x...:.x.xxx:.--..:.....x.:xx:...--.x..x.x:....:...x:xx::......:..--x....:...-...x::..:.:.---.:..:..x.-.....x:....x..:..x........:.::.....::...---------....x.:x------------....x.x:::...x....::....::........x.......:...--...:..x:..x:.x..x:..::x::.x.:...-----.........x:.....xx.--x....:.:.x.:.:::............xx........x:.x..::x.xx..x.....xx.:-:.:..x....:---..:.xx..:x.x:xx..x..-------.....:...----:.....:.x--------.:...x...:..x:...---------..x.xx..:....x:::.x:...x.x..x.x...:---------------------.:x.:..x.:...:x.....:.-------...x...x:.xxx:x:.x:..:.x..x:-.xx..x..x..x..x..x::.x.:.:x..x..x:xx:....------.....--.x..x.:....-....:xx....x:...:-------------:.x.......-..x.x.:..:.x::..:..:::.::.-..:...:x.:.xxx.:xx:........:x.--------------------------....:..---.:......--------:..:......--------------------....---..x...x..x..----------------.:.:..::.x.::....x...x.:.x..-------------------:..xx.-------....x..:....------:.xx:x.......:.x.x:.:..x...:.-..::.x.::xx...-----..x.x...::..--.:..x..x....xx:---...:..:.x:.:.:..:::x.x:...-----.:x...::.:.x:..----...:x..x..:..x.:xxx...xxxx:::....--..:.xx....xx.--.x.....---.......x.xx.x:xx....x.:..:--.:..x..x..:.---.:..x.:..::x.:....xxx:...:xx.-----....x..x...x.x:x.:.:.::.:.---------x...:x:.....x..xx...----:xx::.x:..::.....xxx.....---::...x.xx.:....---------.:...::x:xxx..:xx:...x......:x:.x:--...x:.x.x.:xx.:...:----.x...x.....:x.:..----------..x..:x.:.x:..--------------..x.x:.x..x......:.x.:.x-...xx.:x.x..:x.-------------x..x...x...-----------....:-x....xx:....:xx.x:.xx.:.:-..x.x.....-------------x:....--...:..:x:.xxxx.x.x::x.....-...x..x...------..x.x.....:.x....:...:.x...xx..xx.:.x:-.:.:.:.x..--------------:.:..:...:..:xx.......--:...:.-...x.x....:::......----------.....x:x..x::x..:x.x...-----.xx..:..x.....::..:...........x..:x.....:x.x...........:.x:....:..x..x..:..................:......--.:....x:.x....--..:.::...:.:....:...-x.........:x:.----------..x.....:::......----...::x...:..x..xx...x..x....x:.:..::..::---.....:.....:..:x....:.:.. 14M1D199M4I11M1D26M3I6M22I3M1I25M7I25M2I38M4D136M3D5M2D51M9I7M1I7M3D13M7D8M9D19M9D9M33D4M9I20M7D22M16D16M10D6M1I16M7D24M1I19M2I17M2D31M2D9M1I12M3D9M1D40M9I8M12D46M2I32M5D19M2I62M1I11M3I20M7D9M4D9M8D17M9D35M21D22M7D28M1I41M6D5M2D11M1D17M13I10M1I26M1D30M26D7M3I8M8D10M20D4M3I12M16D28M19D6M7D12M6D29M1I14M5I12M2I15M3D26M5D15M4I33M2D13M2D7M3D26M2D12M3D29M5I26M9D20M4D25M3D15M9D34M2D19M4I17M10I14M14I24M1I15M13I11M11I5M1I25M1I10M13I6M2I26M1D10M6D38M1I10M14I22M2I6M1D19M10D23M5D98M2D14M2D20M1I14M10I17M4I40M3I25M 1502/2271 66.1% 2494/94230402 0.0% 602/2271 26.5% 4025497 NA +3174 chr4 + 190214555 20354882 20354881 20354925 44 TCTGCGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982311 18982310 18982354 75248049 75248048 75248092 44 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x:.................x.x...............::.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 1372571 NA +3354 chr4 + 190214555 20354882 20354881 20354927 46 TCTGCGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982309 18982308 18982354 75248049 75248048 75248094 46 tctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x:x..................x.................::.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 1372573 NA +3102 chr4 + 190214555 20354888 20354887 20354923 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -61274176 -32956226 +3316 chr4 + 190214555 20354890 20354889 20354925 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -61274174 -32956228 +3567 chr4 + 190214555 20354890 20354889 20354929 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 1372575 NA +3102 chr4 + 190214555 20354892 20354891 20354927 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -61274172 -32956230 +3353 chr4 + 190214555 20354892 20354891 20354931 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 1372577 NA +3139 chr4 + 190214555 20354894 20354893 20354933 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 1372579 NA +7020 chr4 + 190214555 20390422 20390421 20391468 1047 ATAATACAGAGATAACATTAGGATGCAAGCTGTATAGGCTTTGATATTTTCTGACAGAGGGGTTCTGGGGCATGGAGTGAGTTCCTAAAACCAC-TAGTAGTTTGAGTTGAAACGTCATTTGAAAAAGACATCACAAAGTTCCTATGGCACTGTCGG----CCTGCTGCATTGA--AGAATGACTAGTTTCCTTTTTTGTT--GT-ATTCTTCATTTAGAAGTAGTGCTG--CTTTAA-------TTGGCATTTTAGGATTAAAAT-TTATTAAA-----AGGAGTATGATTAAA----TGTAAAAGAAAATATCAACACATTATTT---------------------TTCAAAGTCATTATTTTCAACATTTTAGAAAAA---------------------------------------------------------GATCTT-----------------ATTTTTTTTTTTT--------------AAAAAAAAATATATATATACTAAGACAATTAGA--------CTTCCCCAAATACCATAAAACAGACCTTTGGTTTTTTACTTC---ATTGTAAATTACTGAAATTCATTACTTAATTGTATG-CTATGAAATTCTTTGAAAGTTCATGATTACTTTCAAGTTAA-ATTTCAAGTTC--------ATTGG---AAAAAATACACAAAGTATCTGAATGCATAATCTTACATAATTTTTTCCAGAATTTTAATTTTACGGTGCCCATAAATAA---------------------TCCACTTAAAGATG--GAAAACA-------TACTGTGCTTCAGGGAAG-----TATGCATACAAGTTGCTTTTAT------------CATAAATATCT-----------ATTTGACTCTAAAGGCCAAAGAGCCTTTTTGTAAAAACGGTTAGAATTGTCGGGGTAAATCCTTTTACCTATGTAAA-------TTACAGAAC--------------------------------------------------------------TTGTTGCAGAATAATGTATATGTTTCTCCAGGCTTCTCTGGTGGGTGATAACCTGATAGTTTTTAAAAGTGCATCAGCCACAATGCACATAACCCATCTCAAAAGCATCTTGATATTCCTGATGCATGAAATAACTGTTTTGAATGACTGGCAAAGTGTATGAGATGGAGATACAACAGTCAGGGAAATACACACGAACAGAAACCACCAAGAGGACTGCCAGCAATTTCATTGCACCAAGTGTTTATTCAACTGTGGAAAGATCATATTTGGCATAGAAAGTACATTCTTT chr4 - 94230402 16351244 16351243 16352534 77877869 77877868 77879159 1291 ATCACACAGTGAGAGTATTAGGATGCATGCCACGAATTCTTTGATAACTGCTGGCACACGGCTTCAGCACATTAATTTGAGTCCCTGAAACCACCTGGTAGGTTGAGTTGAAAAACCTTTTGAAAAATACATCAAAAAGTTGCTATGGCACTGCAGAGGATACTTATGCATAGAATAAAAGAACTAGTGTAGTGTTTTGCTCAGTAATTCTTCACCCACAAACATTTCTGAATTCTAAAAGTATTTTGACACTTCTCTGTTAAAGCATTATTTAGTGCTTTGCATTTTGGTCTAACTCTCTTAAAGCAAAATCACTTAGTATAATTTCTTTCCTTTTTCTTCTGCTTCTTCAAAAATATCATGTGAAAAGTTTTGGATAAACTCTCTGGTTCCAGTCCTGGAAGGCAGCGTGGCTGAAAGGCAGCGCGGGTGCTTCTGAATCTTTTACAGTCTTTAACAGAATTCTGATTATTTTATAGGGAAAAGGAAAAAACAAGTAAATATATAA-AAGCCAGAGAGAGAGGAGTGGTTTTACTAATTCCATATGGTAAAGC----------TATCTCAAGACTGAAAGGGATGGAATTACATGGCAATCTTGTGTGACCACGCATTTCT------GTCATTGACTGCCAGTAAACTGGTAGTGTAAGTCCAGTTTGAGACTGGCACAAGGAAGACCTATGGGATTTGGATGTAGCAAATCCAGTAGCTCAGATCAGA---TTACTTGCACTGAAATCACATAAAAGGACCTCAGTTATTTCTGTGCTTCACTGATAGCTGCAGAAAACGTAGATATTACTGAGTTTTACATGAGTTTTATGTCTGTACAAATTGCTTTTCTTTCCTTCTACTCTGGCAATGTTTTTGGACATTACATTTGACTCAAAG---------------TTGAAAATAT-----AAATTGAAGAAATAAAATCTCTCTCCTATGTTGAAATTTCTTTACAGACCTAAGTAGCATGATAATCAGGTAACTTGAAACTATCTGATAACAAATGCAGATATTTTCTATATTATTATAAAATCATGTCTGTAT---TACAAGCTGTCATTTATGTCAATATTTCAGTCCTTTCTTAAAGTAAATGAG-TACAATGTA-GTGACTCATCCAAGAGCCATCACAATGCTCTTGATGCATGAAATGACTTGTGCGAATAATAGGAGCACTGTGTGATATGGACGTGGAGCAGACAAGAAAATAGAGAAGAGCTGAGACCACCAAGTGAAATCCCACTTGCCTCATTGCTCCAAAAATTAATAAACATGAGAGGTGATAAATTTTGGCATAATGCTTACATTTTTT ..x.:....x..x.::...........x..::::x.xx........x:.x...:..x.x..x...x.x:xxx.::xx.....:...:.......-.:....x...........x::.x.........x......x......x...........:x.:----x..xx.....x..--.:..x:......x.xx.x.....:.--..-........:::.x..::.x.x...--:.:...-------...:..:..:xxx:.....::-.....x.:-----x.x.x.x..:.:x..----:x....:x.....xx.xxx::..x....---------------------......:x:..:..x.xx..x:....:..x...---------------------------------------------------------:.....-----------------...:.xx..x...--------------.....x..:..x.......x-...x..:xx...--------x..::x.x...x.....x:::.:.x.----------..::..---.:..x..:xx.:x...x.x...x:.xxxx....:..-.:.:.x.x....------..:xx...:.:.:xx:..::.::-.x.x:....:.--------.:...---..::..x..x:.x:.x..:..:...:.xx.xx.:xx:..::.:xxx:....---...x..x:..x.x:x:..:.x.x..---------------------.:....x.x..x..--......:-------.....x.:..:.x:x:..-----.:.x::.....:........x.------------::xx...:.:.-----------.........x..:---------------...x...x.:-----:.....xx.:::....x:..:.:x.......x:.-------.......x.--------------------------------------------------------------..:..::.:...x....x.:.:.---.x..:...x::x.xxxx.x::...x:::::.xx...:.x.....:x..x..-:......:.-:.:..:....:x.:.:x....x::..::..:.............:...xx.x:....:.:x..x:x.x...:...x.....x:.:x.:...x..:.:.....x.x.x..:.x..:.........x.:.x.x...x:x:::.......x....:x:..x..xx.xx..x.:::x...x.xx.........:x:xx......:... 94M1I62M4I13M2I25M2I2M1I24M2I6M7I21M1I8M5I15M4I28M21I33M57I6M17I13M14I20M1D12M8I26M10D6M3I36M1I12M6D23M1I11M8I5M3I51M3D25M21I14M2I7M7I18M5I22M12I11M11I13M15D10M5D34M7I9M62I23M3D51M1D9M1D204M 638/1002 63.7% 1291/94230402 0.0% 334/1002 33.3% 4039178 NA +14171 chr4 + 190214555 20394568 20394567 20394927 360 CAGGACCTCATGGAGCGAGAGATCCAAACCTTTCTGAAGTACTTTACCTTCTACCTTTTTCATGCTACTCAGGATTGAATCAATTGGAAGCCAA-CAAAGCCATTCTGTGTTACTGTGCCTCCTGACTGTCAGCACGCTGCACTGTGCATTTAGATAATTCTGCCAGAAGGCATTTTTATAAAAACAGCTTTCAAAATCTATTCTTGAAAAGACATTTGTATACTCATTATGCCATTCTATCATTTATCCATAGGGAGTTCTGTAAATAAAACACTGAGGTCTAATACTATAGTAGCTGATGGCAGTAATCT----TGAACAGAGTAATTTCTTTTTCTTTATTTATCTCGATAGTGCACAGCTG chr4 - 94230402 16354973 16354972 16355318 77875085 77875084 77875430 346 CAGAGCTTCATAAAAAGGTAAAGCTTAAATTTTCT--------TTCCTCTCTCTCTTTTTAATGCTCTTTGGGACTGCATCCATTAGGAGCCAAACAAAGCACATCTGTGTTGTTGTCCCTACTGACTGTCAGAAT-----ACAGTACATTCAAATATTGCAGCCAGAAGGCGCTTT-ACAAAAACAGCTTTCAAGATGTGCTCTTGAAATG-CATTTGTGTACTCATTATGCAGTGCTATCTTTTGTCAGTGGGGAGTTCTGTAAATAAAGCACCAAGGTCTAATATTGCAGTAGCTGATAGCAGTAAAATAAACGGGAAAGAATAA-CACTTTTTTTTAATACTTCC---TAGTTTACAACTG ...::.:....::.:x.:x.:.x.:x..x:.....--------..x.::...x:......x.....x:.::...:..x...x...:.:......-......xxx........::...x...x...........x.:-----..x..:....:.:...x.x.x..........::...-.:...............:..x.::........x.-.......:............x:.x.....x...:..x:.:..................:...::..........:.::..........:.......xx.----x.:.x...:...-:x......:..x..x:x..:---....x:...:... 35M8D51M1I41M5D36M1D34M1D99M4I12M1D20M3D13M 254/341 74.5% 346/94230402 0.0% 24/341 7.0% 4039595 NA +26786 chr4 + 190214555 20403348 20403347 20403814 467 CAGCAGTTTTCACTGGAGACAGTGTTACAAGAGGCCATTGAATTTCACTTTTTTGAACCTCCGTTGCTGGGGCATTGGTTGCTGGATTGTTATTCTGTTAGCATGATGAACTAATTGACCTAGCAGGGCTCCCTGTAGAATAACAGCTTCTGCTTAGTTCATCAGGAGTACAATTTGTTGTTTCATTTCCTCTTCTAGTCCCATTGGGGAAATTGAATTGAGAAAAGACTACCTACTGGGAGCGTTCAGTGCTCATGACTGAATAAGTAACTTTATTTATGTATTTATGTATTTATTTATTTGGTACTGTCTTAATTAGCAAAGAAGGAATGACTCTATTAGGCAAGAGTCGACTGTGTTTTTGATACAAATGAATAAGCTCCGTTAGCAAAACATTTGATTCACAGAGACTTGTCATAG-TCAGGGCCCCTTGCAGGTGCAGATCTTACATAAAATTTTAATTTGCT chr4 - 94230402 16356329 16356328 16356792 77873611 77873610 77874074 464 CAATAATATCTACTGGAGGCTGTCTTACAACTGGGCATTGAACTTCCCTTTTTCAAACTTTTGTTGGTGGGACACTGGTTTCTGGATTGCTATTCTGTTAGCATGATGAACTAATTGACCTAGCAGGACTCCCTGTGGAATTGCAGCTTCTGCTTAGATCATCAAGAGTACAATTTGTTGTTTCATTTCCTCTTCGAGTCCCATCAGGGAAATTGAATTGTGAAAAGACTACCTACTGGGAGCATTCAGTCCTCATGACTGAATAAGTAACTTTAT---TATTATTAT-TATTGTTTTTTTTGGTACTGTCTTAATTAACAACAAAAAAGAGACTTTGTTATGAGGGAGTCTGCTGTGATTCTGATACAGATGACTAACCACGGTTACAGAGGCACTTGATCCACACGGCCTCCTGGAGGCTGGGGGCCCCATGCAGGTGCAAAGTTAACACAAAGCTTCAACAAGCT ..::.:.x.::.......:.x..x......xx..x.......:...x......::...:.::....x....:..:.....x........:.....................................:........:....x:..............x......:..............................x........::..............x......................:......x.........................---.:.xx....-....xx...x...................:...x:..::.:x....:.:...x.x::.....x:.....x..:.......:....x...x.x.x....xx:.::..:.....:....x:.x..:x.x:x:.-.x:.......x..........:.x:.x...:...::..:..:xx... 276M3D9M1D131M1I47M 369/463 79.7% 464/94230402 0.0% 5/463 1.1% 4047019 NA +3191 chr4 + 190214555 20417418 20417417 20417523 106 ATATATATATGTGTGTGTGTATATATATATATATATATATACGTATATATATGTGTGTGTACATATACGTATATATACATATACATATATAGATATGTGTGTGTGT chr4 - 94230402 81401293 81401292 81401394 12829009 12829008 12829110 102 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGG----GTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAGTGCCTTTTTGT ....x.x.:...x.....x..x.x.......:...x:x----...:..:..x........::...x.:..x:....:x..:....x.x.x:..x:..:x.x.x... 38M4D64M 69/102 67.6% 102/94230402 0.0% 4/102 3.9% -60983875 -33246527 +3353 chr4 + 190214555 20417597 20417596 20417677 81 CTGTAGCCTCTGCCTCCTAAGTTCAAGCTATTCCCCTGCTTCAGCCTCCCGAGTAGCTGGGACTATAGGCGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..::....:xx:x..:..::.......:xx...x.xx.x:.......::.:.........:....:.x.:.......:::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 2220471 NA +3109 chr4 + 190214555 20419667 20419666 20419737 71 CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCAAAAATAAATACAGTGACTGTTAT chr4 - 94230402 48089504 48089503 48089574 46140829 46140828 46140899 71 CTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTAT ....:.:.::::........:....x.x........:.:.:.:..:..x...xx....xx..:..xx.... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -27669837 -66560565 +3130 chr4 + 190214555 20427658 20427657 20427844 187 TGAATTTGCA----------TTCTTTTTTTTTTTTTTTTTGAAACCTTTCTAACAATGGCTGATAATCACTACTGTCAATAGTCTTCTAAAAACTTCCCAGTAATGATTAGATACTATGAATAGATTATTGCTTTTTCTCTTCAGGT-CTTTTTCCCCCAACTACATATAGAATGTTA---TTGAAATTCATGTGTCTTAA chr4 - 94230402 3742436 3742435 3742608 90487795 90487794 90487967 173 TGAATTTTCAAAAGAGCAAGTTCTTTTTTTTTTTTTTTTT-AAACGTTTCTAAGAATGGTTTTTAAACAATAATATAAACAAT--------------------ATGACTATA------GAACAG-TTGTCTTTATTTTTTTCCTGGCACTGTTTATACTCCTTGCGTATATGATGTGATGTTTGAATCTCCCCTGTCTTGA .......x..----------....................-....x.......x.....:.xx...x..x..x.:.x..:.:.--------------------....:..x.------...:..-..:.:x:.x...:.:.:.x..:-..x...x:x.:xx:.:.:....x:....x.---.....x:..x:x......:. 10M10I20M1D42M20D9M6D6M1D22M1I30M3I20M 114/159 71.7% 173/94230402 0.0% 42/159 26.4% 16685222 NA +12719 chr4 + 190214555 20428601 20428600 20428991 391 CATTTCTAGGCCTTTGAGTGCCCCTAAGTGGCCATAATAGAAAATACAGTAT------TTTACAACTCTTGGATGATCTCTCCTTCCATCTAACAGCTAGACT--TTCCACTGGGTTCCTGGCCTGACTTCTGTAGTATTCTGCATCGTTTTTT----------CCATTAAACAAGGGCTTCCAGGACTATAATTTGACTCTGCTA-ATGGAAGGGCATTTGTACAGTATTAATTTTAAATGGGAAATTGCTGACACGTTAAAGTGGCA-TCTGTCCTGCTCCCCACTTG-AACTCCGCTTTAGCCCTGGTCACTGCAGTTGTCAGTATCAATTGGGGATTAGGAGGGCCTGTGGCCTG-AGAGCTGCTGGCCAGCAAATGA-CATCACTTTTC-CTCCATACTCACAGAGCTTT chr4 - 94230402 16385048 16385047 16385455 77844948 77844947 77845355 408 CATTTCTAGGACACTGAGTGCCCCTAGGTGGTCACAACTAGAAGTACAGCATAAACCATTTTCCCCTCTT------CATCTCATTCCTGCTGATGGATGGATGAACTTTGCTGGGCATCGGGCAAAGCTCTTGGGATCTGTGGCA-CATTTTTGGGAAGCATGGCTATTGAGCAAGTGCTTCTCTTGCTTTGAGAAGTCTCTGCTTTACAGAAGAGCATTTGTGTGGTATTAATTTTAATCTGGAAATTGCTGACATACTGAAGTGGCAGTCTATCATTACTCCCACTTATGGTTCCAATTTAGCCCTTGTCATTGCAGTTGTCAGTATCAATTGGGGATTAGACTGGGTTATGGCATGCAGAGCGGATGGTCAGTGAATAAGCACCACTTTTCATTCCATTTTAACACAGTCTT ..........x.x:............:....:..:..:x::..:.....:..------...x.xx.....------:x....x....xx..:.::.x.:..:x--:.:::.....:x:.x...xx::..::..x::.x.x:x...-.:.....x----------.:...:.:....x.....:xxx:..x.:.xxx.x.......x-.::....:........:::.............x:x..............:::.:........-...:..x.xx::.......:-:::...:x.........x....:.............................:xx..x:.:....x..-.....x.x...:...::...:.-..:........-:.....x:.x...x..::.. 52M6I12M6D27M2I40M1D8M10I42M1I62M1I20M1I68M1I22M1I11M1I20M 270/384 70.3% 408/94230402 0.0% 31/384 8.1% 4043553 NA +42014 chr4 + 190214555 20431251 20431250 20432643 1393 AAAGTTGACTTTACATGTCAAGAACATAGACTTTTTTGGAAGG--GGATGGAGTAGGAAGGCAAGGTAGA---CTAGGAAAATTAGATGCTAGGAGGTAACAGTGTGCCTCTATATTTAAAGTAAATATTTGTGTTTTATTTTTATTTTTATTTTTATTTTTTTTAAAGACAGAGCAGCTATCCCCAGAGCAGCCTGCCTGGCAAAAGCAGGAATGGAAGGGCTGAACGCATCTTTTATGGAAGTCAGATAAATTTCATGCTCTTTAACATCGACTCTGACTGCAGGCCTTTCGCTGCAGTCTGGCTCCTTCCCCAGTGGGAACAAAAAAGGAAAAGTGATTAAAGTTCCCTCAGTAATAGACAGCAGGAGGCAGTGGTCTTGGCATCTTCTACAGAGACAGA----GAGAGAGTGCTTTAACAAGACTTGCGAGAGTTCTTTGAAGAAAAGAAGTTAAGACTGGAAGGGCTGGTCGAGGTCCGCTGTAACATTTGTTCATTTCCTCTACTTCATATAGCTTATTTGACTTCTTGGAATAGCGTCACCCTCTTCGTTAAAATGTCCCTGAT-AAAAGGAGGAAAGTGAAGTTG-AGCTCCTGGCCGGGGCCAGGGTTCAGCATGTTCTACTGTGAGTAGGAGTGTTTGGAACTTGATTATTGTAAGACATTCCAACTGATACAAATGATAACTAAATCTCTCTCTCTCTCTTTCTCTTTCTCTGTGTGTGTTTGTGTGTGTGTGTGTAAATCTCTCACTCTCTGTGTGTGTGTGTGCTTGTGTGTGTGAGAGAGAGAGAGACAGACAGACACACAAAATGTGAATGAATGAAGGAAGGAAGGAAGGAAGGAATACAGGA--GAGAAATTTTTCTGTATGTTAGGTGGCTGCGATTTTGGCTGGCCAAAACTGCCTTTTGCCTTCGGTGAACTGGCTAGAGCTGCTCACTACAACCCCTCC----CCATCCCCTAGGACAAAACCACTGGACCTTTCTCTCTTTTTGTCTCTCTCTTTAAAAAGACAGAAAGGAAAATAAGGTTTGCAATCAGTATTCAGACATTCTTATGACTAATAGGATTAGGGGCGTTACGAAGGGATTTGAACAAGATAATTAGTTTACTGCTTAGTCCACAGTGAAGCAAGAAAAATACTTCTGAGAAAAGGCAGACAAAATAGGTCAGAAAATGTGTGGGAAATGAGGTAAGACCTCTCAACAAGGACCACGATCAACTGGAATATTATGAAAGGACTCCTGAGCCTTCATTCATAGCTGCAGACTGTCTGCCTTTTTTTTTTTTTTTTTAATACTTGGCCACCAGAGGTGTGAAGCAAAGTGACTTACTTAATTTTAGAGTTAATAGGTGTTGTTCCTGGACCCTGAGTATCCTGTTCCAAGTGCATAAATGC chr4 - 94230402 16386118 16386117 16387305 77843098 77843097 77844285 1188 AAAGTTAAATTTCTTTCCCAAGACCACAAGTGTTCTTTGTAGGTTGAAACAACTATGTTTACAGTTTAAAAAGCAAGGGAAA--AGGCGCTCCTAGGCAGCAGCATCCATCCACGCTAAAAGCAAATATTTGT---------------------------TTTTGGAGAAGAGAATGGCTGTCCCCGGAGCAGCCAGCTTAGCAAAAGCAGGAATGGAAGGGCAGAACTCATCTTTTATGGAAGTCAGATAAATTTCATGCTCTTTAACATCGACTGTGACTGCAGGCTTTTCACTGAAGCCTGGCTCCTTCCCCAGTGTGAACAAAATAGGAAAAGTGATTAAAGTTCACTCAGTCCTGGACAGCAGGAGGCAACCGCTCTGGTGTCTTCAGCTGAGGCAGAGGGTGAGAGGGCTCTTTAATAAGACTTGTGAGGCTTCTTTGATGAAAAGAAA-TAAGACTCATAGGGCCTATAGATGTCTATGCTAACATACGTTCATTTCCTGTACTTCATATGGTTTCTTTGACACATTGTAATATTGTCATCCCCTTCATTAAAATGTTCATTATGAAAGGGAAGAGAGAGAAAATGTAACTGTTAACTGGAGTCAAGGGTCAGCAAGTTCTGCTGTGAGCA-AAGGGCTCAGAGCTTCCT-------------------TGAATAAAATAGTGAC--------------------------------------------------------------------------------------------TTTGGGGCAGATAG-GGCAGACA-------------------AGTGGGAGATGGAAG-----------TGCAGAACTTAAAAACTGTCCCATTTACT-----GTTTTGTCTTTTGAAGGACAGGA--GTCCTGAGTCAAGTCTGAAGAGGCTGAAGTGGCTA---GCAGATCCTCCTGGATCATGCCTTTTGGCTTTTTCCCTCTGTCTCTGTTTCTTTTTATTTTTCCCTCT---------------TTTCTAAGTTGTGCAATCAGTATTCACACATTCTTATAACTAAAGGGATTAGAGGCGTTGCGAAGGGATTTGAACAAGATAATTAGTTTACTGCTTAGCCCACAATGTAACAGGCAAAACCCCTCTGAGAAAAGGCAGACAAAATGGGTCAGAAAATGTGTGGGAAATGAGGTAAGGCCTCTCAAACAGGGCCTCAGTCAGTTGGATTATTATGAAAGGCTCCTGGAGCATTCATTCA--------------CTGCTGTGCTGTTGACTTCTTTAGCA--TGGCCACCAGAGGTGTTGAGGAAAGAGACTTAGCT-------GAGCAATTGGATG-TGTGTCTGGGCAGTAAGAACTCTGTTGTGACTACTGAAATGC ......:.x...x:x.x:.....x..:.:::x..:..x.x...--.:.xx:.x..x.xxx:..:xx..:.---.x...:...--..::...xxx...:.:...::.x.x..:.:::.x....:..........---------------------------....x:.::.x...:::...:.....:........x..:.:......................x....x...............................................x...........:....:...x..:..................x........x....................x......xx.:..............::x.:::...::.....x:.x...:....----.....:.:x......:........:...:x........x........:-.......x:x.....:x:.x..x...:::xx......x:...........x..........:.:..x......x:x...x....x:....:..:....:.........:.x.x..-...:...:..:..x...:x..-.:..x:.::.:..:.:..:..x......x.....:.......:.-:..x.:.::..:...xx.-------------------...xxx....::.:..--------------------------------------------------------------------------------------------.x..:.:x...x..-.:......-------------------.:..:::..x.....-----------.:...:.--x.:...:.x.:.::.x.::.-----.:.x:.x:...x.xx..x..::.--.:.:.xx.:.xxxxx....xx....::..:x...x---:..:x:.....----:...x..:.xx.:.xxxx:.x..xx::..:.x.:.......:.:.:..:..:.---------------xxxx....x.x...............x..........:.....x:.......:......:......................................:.....:..x.:..:.x....:x.:......................:..............................:........xx...:..x.::...::....x............x::.:x....x........--------------....:x.x:.x..xx:..:....::.--................x:..x....x......x:.-------...:x.x.:.:..-...x:....:.xx.:..x.::.....x::.x.:.xx...... 43M2I25M3I9M2D49M27D243M4I48M1D115M1I21M1I44M1D18M19D16M92D14M1D8M19D15M11D7M2I20M5D23M2D35M3D11M4I53M15D238M14D26M2D35M7D13M1D42M 856/1171 73.1% 1188/94230402 0.0% 239/1171 20.4% 4045133 NA +30053 chr4 + 190214555 20439893 20439892 20440684 792 AAAAAGACATCATAGAGTTAAGACCTATTGAC---------TTAAAAGCACACAGAAAGCAGATCACTTGCCATTTTTAATTATATAAAGTTTTCCATCTATTAGGTTTATTTTGCCAAAGCCTTCTAATGAAATAGTTACA-----CCATTTAATTTAAATTTCAGTGGGGTTGCCAGAAGTGCAATTAATTGTTAAAAGTTCCAACTATGAAATTTTGCTTTGGAAAGCAGTCTGCCGTATCTTTATATACCATTAAATTTGATCATATGCTTGTCATTCTGGCAGAACATCTTGATATACTTGAAGAAACATAGTTAGGGGAAATAAA---AAAAAAATTGTTGGTACTACACTGTAGGGTTTCCAAATACAAATGTTAGCATGATTGGGTTATACCAATTCATCATTACGTTGCATTTCCCTGGAGTTGAAACTACATCTGGGCTTGGCAGGGATGCATTATCACCAGTCAGAGTGGGGACCATGTGTCAGTCTCTCAAAGAAGATATATGGTCTTGTGTACCATTAGGATTGGATATGCTTATGTTGCAGACTTTAAATCAACTTCTGAATCCTTT-CTACAGATGTTGACTGCTGCAGGTCTGTAAATAGC-ACAGTATATTCTGAACTTCAGCTGATATATACGGCCCTAAAAAAAAAGCAACACTGAGATACACGGCAATAGAAAACAACGCAATG-AATAAAAATGGGACAGCTCCAAATTTGCTGAAATAATCTC----ATCTGTTTAATGACATTGTTTAAACAAAATTACCTCTGAATT-TGAAGTTGCCATTTTCTCAGATCAG chr4 - 94230402 16392003 16392002 16392789 77837614 77837613 77838400 787 AAAAATGCATTTTAGG----AGGCCTTTTGACAGATGTGATTTAAAAGCTTAAAGAAGGCAATGCACCTGTCACTTTTAATTGCAGAAAGCTTTCAATCTATTAACTTTATTTTGCCAGAGGCTTCTAATGAAAAAGTTCCAGTATCTAATTTAATTTAATTTTCTTTGGGTTTGCCAGAAGAGCAATTAATTTTTAAAACTTCCAGCTATTAAGTTGTTCTTCAGTAAGATGTCTTTCTG--CCTTAGATACCATTAAGTTTAATCATACACTTGTCATATCTTCAGAATATCTTGATATCTTTGAAGAAATGT------GGCAGATACAGGTAGACATATTGTCTGTAGTACTAAGTAAGGTTTGCAAATACAAATTGTAGCACGATTGGGTTATTCCTATCCATCATTAGACTGCATCTCTCTGGAGCTGTAAGTACATCTGTGCCTGGCAGGCTTGTGTTATCACCAGTGCATATGGGGACCATGTGTCAGTCTTCCAACAGAGATATATAGCCTTGCGTAGAAGCAGGATTGGATATGCTTATATTTCAGCTTCTAAATCAATTTCTGGGACCTTTGCTACAGATGTTGGAAGCTTCGGGTCTGTAAAACGCTATACTGTAATATGAACTGCAACAGAAGAATA-------AGCATAAGAGCAAATATG---CATATGGCAGTAGGTAGCA----AATGCAGTAGGGCCAGTGTAGAAACAAATC--CTTACACCTTCTCATCTATCTGTGTAA--ATATCATTTAAATTCAATCACCTCAAAGTTCTGAGCTGGCCCGCTTCTCAGACGAG .....x:...:x...:----..:...x.....---------........x:.x....:...:xx...:..:..:........::.x....:....x........:x............:..x............x....x..-----:x...........x....xx....x..........x..........x......x.....:....x..:..x.x...::.x...xx....x:.xx--.:...x..........:...:......::........x::xx.....:..........x:.........::.------..x.:...x.---.:.x.x.....:x...x...xxx...:.....x...........xx.....:...........x..x..:........x::.....:..:......:..x..x........x..:.......xx..::...........xx:x:....................::...x::........:.:....:...xx.x:..................:..x...x:.:........:.....::x.....-............:xx...x.:..........xx..-.:.x.:..x.x......x..:.x..x:x...-------.:x.x..:.....xxx..---:.:.:....:...:x.:..----....-.:..:::x::.x::..xxx.....:--..x.x.:xx....----......x...--.:..::......:xx...:.....x:.:..-...:x.x...xx:........:x.. 16M4D12M9I101M5I94M2D72M6D10M3I247M1I35M1I31M7D18M3D19M4D4M1I25M2D13M4I10M2D30M1I25M 565/762 74.1% 787/94230402 0.0% 55/762 7.2% 4047890 NA +17003 chr4 + 190214555 20454480 20454479 20454901 422 ATTTCTTTGCTTTTCTAAAGTTAAAATCTGGCAAATACTCATTTATCATTA---CTCAGTAGTTTCCAAAGTACTCCATGGAAGTACAGATTTATGATATTTCTCAGTCAGACTCTAAGAGAGGTTAAACCATGAAGGAAAATAAAATTACCAGTAATTAAATTTACAGGCAGGTTTGCCATCTAAAGCAAATTTATTGCTTCACAGTGAA-ACATAG-TTTAGACACTTTCACATAAAGTGAATCCATTTTTAC-----ATGATATAGGTATTATACATTGCTGTTTCAATTTATATAATTAAAATTATATCATTGCACTCTAAGGTTAATGGGATACTCAACTGGAAACCATACGTCGTGGGCAATAAAATAGCAGCATTGCAGTATTGGCT-CTTTTGTTAAAAGCTGATGCAATATTTCAACACCATTA chr4 - 94230402 16399698 16399697 16400122 77830281 77830280 77830705 425 ATATTTCTGCCTTTTCG--TTTAAAAATCAGGACACA-TCATTCATTCCTAGCACTCAGTATTTTACAAAGTAGGGAATGGCAGTATAGATTTATGATATGCCT-GGTCAGACACTGAGGGAGGTTAAACCATAGAGGAAAATAAAATTACAAGTAATTAAATTTACAAGCAGGTTTGCCATCTTCAGAAGATTTATTGTTTTAGAACAAACACATGGTTTTAGCCACACAAGAAAACAGTGA---TATCTTAACAGTGTATGATATAGATATTATGTGTGG-TGTTTCaatttatataattaaaaatttaGCACTCCTTTTAAGGCTGAATGGAATATTCAACTGGGAGCCATATATGGTGAGTAATAAAATAGCTGCAATGCAGTACTCCCTGCATTTTTTAAGAGCTGAAGCACTCTATCAGGCTCATTA ..x.:.:...:...:::--x......x:::.x.x.:.-.....:..:x:..---.......x...x.......xxxx....x....:.............x:..-:.......x..:..:.............::................x................:...............xx..x.:........:..:.x.:::..-....:.-.....x...x:xx:x.x.x.....---:..:..x..-----.........:......:::.x.-.......................x.x..x..:.x.x:.:x.:.x.x.....:...:........:.:.....::.x...:.:...........x...x.......:.xx..-.x...x....:......x...x.x.x...:xx:..... 17M2D18M1D13M3I50M1D106M1I6M1I24M3D9M5I22M1D111M1I38M 312/414 75.4% 425/94230402 0.0% 19/414 4.6% 4054782 NA +3201 chr4 + 190214555 20463443 20463442 20463520 78 ACTGTGATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGCGTATATCCATATATGTGT chr4 - 94230402 4406397 4406396 4406474 89823929 89823928 89824006 78 ATTGAGGTAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGT .:..x.:..x.x::.....xx.xx:x...::........xx....x:.:..........:..:...........:x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 16057046 NA +3109 chr4 + 190214555 20463450 20463449 20463537 88 TATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGCGTATATCCATATATGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ..::.::..::.....:.:.:.:.x.....:....x.x.:....::.....x:.:..:.xx....:.....x.x:x..x:.x.x.... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% -51166685 -43063717 +3000 chr4 + 190214555 20463451 20463450 20463506 56 ATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGCGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...:.......::.......x.:.:...:.x:..:..........:.x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 759177 NA +3097 chr4 + 190214555 20463515 20463514 20463573 59 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTATATCTCACATCTCTCCAACT chr4 - 94230402 89821281 89821280 89821339 4409064 4409063 4409122 59 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCT ..........x.x.........:.:.:.:.:........:.x.::xx......::.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -69357766 -24872636 +6185 chr4 + 190214555 20467732 20467731 20467838 107 TTTGTTGTTGTTGTTTTTAGTGATCTCAGTGAAAACCAAATTCAGGCAATCCCAAGGAAAGCTTTCCGTGGGGCAGTTGACATAAAAAATTTGTAAGTATCTATTTT chr4 - 94230402 16405506 16405505 16405612 77824791 77824790 77824897 107 TTTAATCTTCTTTTTCATAGTGATCTTAGTGAAAATCAGATTCAAGCCATACCCAGGAAGGCATTTCGTGGAGCAGTAGACATAAAAAATCTGTAAGTATTTTCTTT ...:x.x..x..x..:x.........:........:..:.....:..x..x..x.....:..x..:.....:.....x............:.........:.x:... 107M 84/107 78.5% 107/94230402 0.0% 0/107 0.0% 4062226 NA +3058 chr4 + 190214555 20472192 20472191 20472270 79 AAAAATTGCTTTAGAAATGTGTGTGTGTGTGTATATATATATAGATCTATATATCTATATATAGATCTATATATAGATA chr4 - 94230402 47095148 47095147 47095226 47135177 47135176 47135255 79 AAAAGTTCTTTTAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ....:..x:.....:.:....:...........:.:.:...:.x:.x:...x.::x..x:..:x:.x.::.....x.:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -26622956 -67607446 +29427 chr4 + 190214555 20478430 20478429 20478909 480 AAAGTTTCCAGCAGCATCTCAACTTCTGCTCCTGTAAGGAAAGTAGTTGGCCTTCCATTCCTTGTAGGACAAGGTTTGCTTGAGTGCTTTCTGGCATGCTGGAGG-TTCCCCTTTGTGTATTGTGTGCATGATTTAGAAGAAGCTGTGTCAGCATTGATTTATACATTGACAGCTAAGGATAATAAGATATGGGCAAACATACAGCTCACCCTTTTACAGATTAACCTGGAGACTGCATTAGGCAAATTTGATAGCATTAAAAGATTTTGCCGATTTGTCTGGAAACAATTTCTCTTTTGTAGTGTGTCAGGGGTAACACTTCATGCCATTGTACTAATTTAAATGGCTTTGATAAATTGTTCAAGAGGTTAGAGAATAGTAGTGTAGATATATATATAGCACTTTAAAATAAAAAAGGCTATTAACTTAATTGTTAAATGAATTTAATCTGTAAAAATCAAAAGTGCTCAAGAATGTAAG chr4 - 94230402 16414805 16414804 16415277 77815126 77815125 77815598 473 AAAGTTTTCGGGTGCACCACAGCTGCTGCTAGTGGAAGAAA-----TCTGCCTTTCAGTTTGTGTAGGACAAGATTTGCTCAAGTGCTTTCTCTACTGTTAAAAGATTTTCTTTTGTGTATAATGTAGATGATTTAGAAGAAGCTGTGTCAGCACTGATTTATACATTGACAGCTAAGGATAATAAGATATGGGCAAACATACAGCTCACCCTTTTACAGATTAACCTGCAGACTGCATTAGGCAAATTCAATGGCATTAAAAGATTTTTCCAATTTGTCTGGAAACAATTTCTCTTTTGTATTGTGTCAAGGGTAGCATTTCATGACATTGTACTAATTTAAATAGCTGTGATAAATTGTTGAAGAGGTTAGAGAATTGTACTTTGTATATAT-TTTACCTCTATAAAAT-AAAAAGTCTATTAACTTAATCGTTAAATGAAATTAATTAGT-AAAATGAAAAGAGCCTCAGTAAGTAGG .......:.:.xx...:.x..:..x.....xx..x...:..-----.:x.....:..x.::x...........:......::..........xxxx..:.::.:.-..::.:.........x:...:x..........................:..........................................................................x...................::..:...............x..:.............................x.......:.....:..:......x..................:...x............x...............x...x.x.:x......-.x..x.x..x......-......x.............:..........x.....:x..-.....x.....x..::x..x.x...:. 41M5D59M1I288M1D16M1D41M1D27M 398/472 84.3% 473/94230402 0.0% 9/472 1.9% 4063625 NA +38800 chr4 + 190214555 20480244 20480243 20480911 668 CCTAAAAGTAGTC--TTGCTCTCTCATGCCAAGGATAGTGAAATTAACATGCAGCTGGGCTTCTCTGATAAATGGATTCTGTTAGGTCACTGAGGGGGTGCATGTGACATTAAGTGATTTACAGTCCTTTACCTTAATGAAATTGTTTCAGCAAGATGACGCTGAAAGCTCTTAATGGATAGCTTTTCTTGATCTAATGAAATTGCATTCCTATGGCATTTAATATAAGGTGCAGTTATTATTTACTGGAGCTTTCCAAGGGCTGCTA-TTTGCACAGACAGTTCAGAAC--AAAAAGATTTCAGTGGCGGCATAGAGGCGAGAATGGCTTATGACATTCGTAAGCAGATGAGTGTGTTTGTGAGGGCACTTCAGTGAGTGTGTCCAGGGTATCATAGACCCTTCAGGAAACTT-CTCATCACCTACCCCAGCTACTGTCCATCCCTTCTACATATATTCTTCTAATCTTTTTAACAGGCAACTGGATTACAACCAGATCAGCTGTATTGAAGATGGGGCATTCAGGGCTCTCCGGGACCTGGAAGTGCTGTAAGTACTGCTATTTCTCTTGCTCTTTTAACGGGGGCTTTGTGTCTGGACAGGACTAATGTGGAAGCTTATCTGCTAGCTTAAAACCTTGTTGTCAAAATAGTCT-CTCAAGAGATACCTTAAA chr4 - 94230402 16416236 16416235 16416898 77813505 77813504 77814167 663 CCTAAAAGTGGTCCCTTGCTTGCTGCTGCCAGGGCGCAGGGAATTAACATGCAGCTGGGCTGCTCTGATAAATGGATTCTGTTAGGTCACCGAGGGGATGCGTGTGACATTAAGTGATTTACCGTCCTTTACCTTAATGAAATTGTTTCAGCAAGATGACGCTGAGAGCTTTTAATGGATAGCTTTTCTTGATGTAATGAAATTGCATTCCTTTGGCATTTAATATAAGGTGCAGTTATTATTTACTGGAGCTCTCCTGGAGCTGCTGTTTTGCGCAGACAGTTCAGAACAGAAAGAGATTTCTGTGGCAGCATCCAGGCCGGCATGGTGTGTGACAGTCCTAAGCACACGAGGATGTTTGTGAGAGTGTTTCGGTTAGCGTGGCCATG------CACACCCAT-AGGAGGCTTGCTCCACACGCACT---GCCAGCGCTCAGCTCCTTCACAAATACCATCCTAATCTGTTTAACAGGCAACTGGATTACAACCAGATCAGCTGTATTGAAGATGGGGCATTTAGGGCTCTGCGCGACCTGGAAGTGCTGTAAGTACTGCT-TCTATCTCTGACTTTTAGCAAGAGCTCGGTATCTGGGGAGTACTAATGTAAAAGCTTATCTGTGAGCTGCAAGTC-TGGTGTCAGAATTGTCTGGTGAAAAGATGTCTTAAA .........:...--.....:x..xx.....:..xxx:x.:....................x............................:......:...:....................x..........................................:....:......................x..................x........................................:...x:.:......:-.....:...............--...:.......x.....:....xx....x:.x....:x.:.....x..x......x.:...x:..........:.:::...:..x..:...x...x.------:.x....x.-....::...-...xx...x:..:---..:.x:.::..x.:.:.::...x...::x.:.......x.....................................................:........x..x..........................-.:.x...:xxx......:.::.:...:x..:.....:x..x........::...........:x....xx..::.-..x.....:...x....-x.x..:....::...... 13M2I253M1I21M2I97M6D9M1D9M1I13M3D131M1D75M1D17M1I18M 542/656 82.6% 663/94230402 0.0% 19/656 2.9% 4064008 NA +15228 chr4 + 190214555 20486182 20486181 20486721 540 TTCTTTTTAATTCTACAGCACTCTCAACAATAACAACATTACTAGACTTTCTGTGGCAAGTTTCAACCATATGCCTAAACTTAGGACTTTGTAAGTAGTCACAATATATGTAAA---------AGTCATATTAATCAATTA--------AAGC----TTCCCCT------------------------TAAATA-----GCATGTTCAGTAAGCAAAGG----------ACAGGACCACTG--GTTTACAAG-----------------------GTAGACAAG----------GAAAACCCAA---------CTTTGG---AAAAGAC--------------------------------------------------TAGATATGAT----------------------ATTTGTGGGAATGAGCTATT--ATTCTAGAAA---------------CTGGAAAGAT----------------TTCTTTTAACTGATA----TGCATTATGGAA-ACTTTGGAGTT-----AAAA--AAAAACAACATTTACTTTGAGCTATTGTGGAGGTCACATTTCATTAAG--AAATGGAAGACTCCTTGATTGGCTGTCAGAAATGATAAATGGGAAATCTTTATGATTTTATTACTGTACTGCAAGCAGACCTAATAAAGCTAAACTGGTTCTTCAACATTCCTTATAACGTGAAATTATAGCATCACCCTCTAGTACTTCTATAATTAAGATTGTGTCAGCATTTATA chr4 - 94230402 16419448 16419447 16420208 77810195 77810194 77810955 761 TTCTTCTTGACTTCACAGCACTCTCAACAACAATAACATTACTCGACTGTCCGTCGCAAGTTTCAATCATATGCCCAAACTCAGAACTTTGTAAGTACTCCCA-----TGGAAACTGGCTACCATTGTTATGAACCCAGTATGTTCAGTAAACCATTTTTCCCTCTACCAAGTTCTGCCAGTGGTCTGTAAGTACTTATACATGTATAGAAGGTAAAAGCTCTGTCAAAACAATAATATTGAGGTTTGTAAGTGTGAAGTGTGTGTTTGTGTGTGGCAGATAATTCTGAAAGGTGAAACCCCAAAGCTAATTCCTGTGGCTCAGAAGATAGAGAAGCAGTTGCATTGTTTTCCTTCTGTTTCTTCAGAGTATAAGGTGATGGAAATGTTTTCATGGCCTTTTTCTAACTGGATGTTTCGTAGTGCTCTGTTTGATCACAGAAAAGCTTCATGTTGCTACAGAAAAGATGGAGACAGAAGGGATCCTCTTTTATATGTTACAGCTGCATAGAGAAAGAAATTGATGTTTTTTGAAAGTCAAAAATTTGTTTTACTTTGAGCTATTGAATGGGTCACATTTCATTTAGTAACATGGAAGAATCTTTGATTGGCTGTCAGACGTGATAAATGGTAAATCTTTATGCTTTTATTACTGTACTGCTAGCAGACCTAATTAAACTAAACTGGCTTTCCAACATTCTTTGTAACATAAAATTATAGCATCATCCAGTAGTGCTATTATAATTAAAGTTCTGTCAGCATTTACA .....:..:.:.::................:..:.........x....x..:..x...........:........:.....:..:............x..x..-----..x...---------.x.xx...x..:.x.x..--------..:.----..:....------------------------...:..-----:.....x:..x.:.:...:.----------...:x.x:.:..--....::...-----------------------.:...:..x----------....x.....---------..x...---.:....:--------------------------------------------------.:..x...x.----------------------..x.x.x.x.:..xx..:..--..:x:.....---------------.x.:......----------------:.......xx..x..----.....x:x.:..-.xx...:x...-----...:--.....:xxxx.................x:x:..............x..--.x........x..:................x:..........x...........x.................x............x..:.........:.:.:........:..:....:.:..............:..xx....:..x:.........::..x............:. 103M5D6M9I18M8I4M4I7M24I6M5I20M10I12M2I9M23I9M10I10M9I6M3I7M50I10M22I20M2I10M15I10M16I15M4I12M1I11M5I4M2I48M2I178M 420/535 78.5% 761/94230402 0.0% 231/535 43.2% 4066734 NA +35927 chr4 + 190214555 20486182 20486181 20488989 2808 TTCTTTTTAATTCTACAGCACTCTCAACAATAACAACATTACTAGACTTTCTGTGGCAAGTTTCAACCATATGCCTAAACTTAGGACTTTGTAAGTAGTCACAATATATGTAAA---------AGTCATATTAATCAATTA--------AAGC----TTCCCCT------------------------TAAATA-----GCATGTTCAGTAAGCAAAGG----------ACAGGACCACTG--GTTTACAAG-----------------------GTAGACAAG----------GAAAACCCAA---------CTTTGG---AAAAGAC--------------------------------------------------TAGATATGATATTTGTGG-----------------------GAATGAGCTATT--ATTCTAGAAA---------------CTGGAAAGAT----------------TTCTTTTAACTGATA----TGCATTATGGAA-ACTTTGGAGTT-----AAAA--AAAAACAACATTTACTTTGAGCTATTGTGGAGGTCACATTTCATTAAG--AAATGGAAGACTCCTTGATTGGCTGTCAGAAATGATAAATGGGAAATCTTTATGATTTTATTACTGTACTGCAAGCAGACCTAATAAAGCTAAACTGGTTCTTCAACATTCCTTATAACGTGAAATTATAGCATCACCCTCTAGTACTTCTATAATTAAGATTGTGTCAGCATTTATATTTAAAAATATCTTTCTGGGTTACAGATGGACATTAAGAT----ATTTTTGGTCTAATAAAGTATTGACTACAGCTGTTTCTTTTCTCTTGAAGAAAAAGTAATCCTTAAAGCCCAGAGTAGCCTTTAAAATCTTTAAAGCCCAGGGTGGA--------CTTTAAGTTATAGAATATCAGAGGTAAATCTCATTTGAACTGAATTTCAGAATCACCTTGACCTAAAAAAATATATTACATATAACGTGTAGGACATGATTGGAAGCAAAACCAAA--GCATCAAACT----TCTTGAAA------AAAAAGTGTTTTTAAGTTGGGTAAATATATTTTGATTAGATTTTCAAAATACTCCTCATTTTCTGATAGCTTGTAACTGGAAAATATTAATTTTATTTTCTTAATAAAAATTTTGAATTACCATCTTTTTAATGAACTAGGTAATACCAATTTTAATGTCATTTTTTTCTTACTGAAATCCAACTCTGTACATAATAACACATCATTATAATTTCCTTGGAATATTATTTAGCAAAATAAAGGAATTCTACAAGTATACAGACATAGCTAAATTTTGCATTCTTGGGGCTATCAGAATAAGACTAATCTGACAGAATTAACAGCCTAGTTCACTC------------------AAAACTATAATTTCCCAGTAACTTCAGGTATTTTTTTTAAAAAGAAATTGATTCAAGCTTTCAATCTTTGCAAAAACAAAGCCAATGAAATTGTA----AAAACATTCATCTGAATTTTTGACAGTGTCCCTTATT-----TTCTTGTAGAAATTCGTGAGTTTGTCTTACTAATCAGGTTTTTC-CATTTTTACATTCTTTTCTC-------------------------ATTTCAAGTTCCTAATTGGAATTT----TTATAATGTGCTTGGTTTAGACGGAAATATTT--AGAGTACAAG----GATATGGAATGTGCCTCTGTGGCTTCCAAAGGCCAGAACTTCAACTTCCAAGCAAACCGAGCAAGAGGTCACCCATCTTTCCCAAAATGTAGCTTTTTGTTCTGTGGTACGCCTTCTAG---TTGTGAAGCAAAA--CATTGTGTTCCTTATCTATAAGCTCAAGGAGAATGCAAAGCAGCCATTTTACTTGAAATTCCTTTGCTTTGGTTGGGTCATTATTCTATAGTATCATTGCTACTTAAAAATTCCATTTTTATAGCCTAATTATCTTTCTGGACTGAGTT-CCATGTTTTAATA--TCCATTACTGTTATTGGGTTAGAATTGAACACATCAGCTTAAAAGGACTAAAATGGTATTACTGTGTCATAGATGGTTCTGGGAATGGTGCTTTGATTTATAGCTTTGGATGTCCTTTTCTTTAGTTTGAGA------------------AAACATAAAAGCCAGTTTGAAGTCATTTACCTAATTTAGTGGATACATTTGTCTGATATTTTATTAATGGAGAAGTGCTATTTGCCACTTGGAAGCAATCCATGATCTTGTG-TGGATCCTGCCAACATAGA-GCGACTCACTTAATTCCTTCACTCCCAGACATTT---GTGCCTTTTAATTTCAGTCCCTGCTCTTTGAGGCTAGGTCTCCAGGAGCCAAAGG-AGCTAA-TCCCTTTTCTGTGATTAAACAACAAAAGAAGGAAATGAGAATAAGGGTGTGAAA-AAAGTGTTTTATATTGAATTATTATTCTGTCTTGTTCAGCAAAAAATGCAAGTGTCCTGCTGCAAAGGTTTTATAAGCGGTTTCTATAGAGACTCATAATGGCAGGAATTATTGATATTTCAAACTGGGAGCCACAACTTTTACTAACTTGCCCCTCGCCCAGTCTCCCCATTCTCCCACCCCACCCCCATTGGCTCTCAGGATGTTGGAACTGTGGAGCAAT---------TTGCATTGGACTTATTTTTTTCTCTTTCCTCTTTTAAATGAACGTAAGTG-AAATATGTTCGTTTAAAACATAATTTTATGGACATATTCAAGCTTCTATAAATTGCTCAGTTCAGACTAAATGAA------GAGAGACTTGATTCTGTGATTGTACATCAGTTTAATTTTTAGGAAAAATAA----TTATATTGGAATCTGCTTAGCTTTATCTAC-----------TTCTATGTTAAGAAATACAGGTATATATTAATGAAAT-----------------------------AACGACTTTCTGTTTTCTTGCTTTACACTTCTTT---------------TTTTCTCATTTAGTCGACTGCATTCAAACAACCTGTATTGTGACTGCCACCTGGCCTGGCTCTCCGACTGGCTTCGCCAAAGGCCTCGGGTTGGTCTGTACACTCAGTGTATGGGCCCCTCCCACCTGAGAGGCCATAATGTAGCCGAGGTTCAAAAACGAGAATTTGTCTGCAGTGGTAAGGG chr4 - 94230402 16422825 16422824 16425650 77804753 77804752 77807578 2826 TTCTTCTTGACTTCACAGCACTCTCAACAACAATAACATTACTCGACTGTCCGTCGCAAGTTTCAATCATATGCCCAAACTCAGAACTTTGTAAGTACTCCCA-----TGGAAACTGGCTACCATTGTTATGAACCCAGTATGTTCAGTAAACCATTTTTCCCTCTACCAAGTTCTGCCACTGGTCTGTAAGTACTTATACATGTATAGAAGGTAAAAGCTGTGTCAAAACAATAATATTGAGGTTTGTAAGTGTGAAGTGTGTGTTTGTGTGTGGCAGATAATTCTGAAACGTGAAACCCCAAAGCTAATTCCTGTGGCTCAGAAGATAGAGAAGCAGTTGCATTGTTTTCATTCTGTTTCTTCAGAGTATAGGGTGATGGAAATGTTTTTCATGGCCTTTTTCTAACTGGATGTTTCGTAGTGCTCTGTTTGATCACAGAAAAGCTTCATGTTGCTACAGAAAAGATGGAGACAGAAGGGATCCTCTTTTATATGTTACAGCTGCATAGAGAAAGAAATTGATGTTTTTTGAAAGTCAAAAATTTGTTTTACTTTGAGCTATTGAATGGGTCACATTTCATTTAGTAACATGGAAGAATCTTTGATTGGCTGTCAGATGTGATAAATGGTAAATCTTTATGCTTTTATTACTGTACTGCTAGCAGACCTAATTAAACTAAACTGGCTTTCCAACATTCTTTGTAACATAAAATTATAGCATCATCCAGTAGTGCTATTATAATTAAAGTTGTGTCAGCATTT---------------------------------ACAATAAGGTCCCCATTTTTAG-------------------AGGTTATGTCTTTC---------ACAGAAGAACACTTGA----------AGCTTCTAAAA----CAAAACACAGTGAAAAGAGTGTGTGTGCAAGAGATACAATTTGGGG--------TTATTTGTTCTG---TTTATATTCAGCT--------AATAATAAAT---GTACATTGTGT---------TAAGCAACAAAGCTAAACTCTATCAAAGTTTAGTCCTGAGACACTTTCAAACAGGCTTTCCAGTGAAGTGGAAATAAAGTCAGTGG----------------------------GGCTAGTCACTTGAG---------TTAACATTTGTAA--------CTGAAATAACATCATTCAGATGAG-----------------TAGTTCTGTTGATTTC-------------------------ATAACAGA--ATTATAACTACTCTTGCAT--------GAACAATACAAGAGCTCTTGAATTGT---------GCTGAGCATTGGCTTTTGGTGGCC-TCAG--TTATATTTTGAGAATAGAATT-TCATTCCATTTCATTCTCTTGTGTCTGGGACCTGAAAACATTAATGTCC--------------ATCTGTGCCA------------------CTTTCAAACTTTG-------AAATCCAGT----TTGTATTCTGAAGCACAGATT----------ACAGTGAATCAAATTAACAAATTTTGTTTAAACT--TAAATTTCTTTTG-----TAGGTATTTCACTTTTTTAAAATTTATTTTCTAAACAAAAGAAAGCAGGCACACAGAATCCTAGATTATAGCTGTAACATCCCATAAGAATATGCTT-GTATAACCGTATAAATTTCAGGAGCATTAGTTCTGATTTGCAATGGTCTTCT-TGCCTACAGCTGGCCACAGGTTGTACT--------GAATGAGTATGCTGT----------------ATTGTGAACTGTGTTTGCAAAGCACTCACACAAGAATCAGTACAGGAAAATGCATTGCCTTTAATTTCTAATCATTTATGAAAAAAAAAAAGCAACCA-ATGAATTAAAGT-------ATTTTGTTGGTCTGTCACACAAT----TCA-TGTTGCTTTAG-----TCTTTTCATGGATTAGTTAGACTTCTTGTTTAAATTGTGGTTTTCTTGTACTTCCTTTCCAGTTATTTAGTAAGC----AGCACATGAACTAAAAAGCACCAAATTGACATTATTCTGTTACGGATAGATCTGAG--TAGGGATTTG---TATAACTGTTGATGTACTTTTCTGTAGTTTGAGAAAAATGCAAGAGCCAGGGAAAAGTAAGAGCCAGAGAAAAGTAATTAACCTAATTTAGTGAAGACATTTGTGTGATATTTTATCAATGGCAAAGCGCTTATTGCCACTTGGCAAGGAACAACGGTCTTGCATTGGACCCTGCCATCCAGGAGGCAGCTTTCTTAATTTCATAGCTTGC-----TTTAGCATAGCTTTTAATTTCAGACATTG--CTTAGCCTTTATGCACCAAGGAGCCAAAAACAGCTAAGTCCCCTTTCTGTGATTAAACAA-AAAGAAAGGAAGTCGGGAAAGGGATGTGAAAGAAGGTGTTTTATATTGAGTTATTACTCTGTCTTGTTTAGCAGAAAATGAATATGACCTGTTAGACAGATTTTGCAGGCTGTTTCTATAGAGACTAATAATGGTGAGACTTACAGATGTATCTAATTGGAAACCAAATGTTTTATTCACTCTTCCTTT---------------------------------TTGA----CAGCATGTTATCACTGTAGGACGCTACAGTTCTATATCACTTGAGACATTTTTGTCTAGTCACCATTT-------------GTGCAGATCTG---GACTAAAG---ACCTCCCTGGCAGCTTTTAAGCTCCTGTGTATTTACTTCTTTGATTTAGTTTAATTTCTTAAGAAGCCTTCATCTATTTTTGTAA-------TGATCTAGACCACAAATAAAAGGTCATTTTGCTGCTTATATAGTTTTGTTTATAAGCATTTAAATCCCAGACTTTCAGCAAAAGATCTTTATTAATAAACTGGTTTGCTGCTGGAGGCGGGAAGAGGAGGGACAGGTTACTGTTCTGTTTGTTCTCCCCAATTTAAACCTGGGTGTCTATCTTCTCATGCAGTCGCCTGCACTCCAACAACCTCTACTGTGACTGCCACCTGGCCTGGCTGTCGGACTGGCTGCGGCAGCGGCCACGTGTAGGCCTCTACACTCAGTGCATGGGCCCAGCACACCTGCGGGGCCATAACGTGGCTGAGGTCCAGAAGCGGGAGTTCGTCTGCAGTGGTAAGGG .....:..:.:.::................:..:.........x....x..:..x...........:........:.....:..:............x..x..-----..x...---------.x.xx...x..:.x.x..--------..:.----..:....------------------------...:..-----:.....x:..x.:.:...:.----------...:x.x:.:..--....::...-----------------------.:...:..x----------....x.....---------..x...---.:....:--------------------------------------------------.:..x...x.x..::...-----------------------x.:..xx..:..--..:x:.....---------------.x.:......----------------:.......xx..x..----.....x:x.:..-.xx...:x...-----...:--.....:xxxx.................x:x:..............x..--.x........x..:................x:..........x...........x.................x............x..:.........:.:.:........:..:....:.:..............:..xx....:..x:.........::..............---------------------------------...x....:.----......:.-------------------x:.:.:.x.....:---------.x.:.:x..:x...:.----------...:.:.....----:...:.x...x.x::.--------x.x:...xx...x...x.x:.:--------.:.....xx...---..:.x.x...x..--------..x....x..---:..:.x:....---------.x:.x.:....:.:...--x:......x.----..:...:.------x...x:x.:...:x...x::..::.x...xxx.x.x.:.----------------------------:...x..x...x..:---------..x.:x..:x...--------:....x..x....x..:x:....:-----------------..:.x:::..xx....-------------------------......x.--.......:.x.::.x.x..--------.x.x....x.:..::...xx..x.:.---------...:.::x...xx..:.x.x...:-....--.x.x.:.xxxxx:.:......-x..x:.:.x....:..------------------.....xx....x...--------------..:.x.x::.------------------.......x.....-------...x...:.----.....----:..:..:xx..:----------......xx:.xx...-----x.:....xx...:.--.:.:...x.:..:-----:....x....-.x......x.x.:.x..:..-------------------------.x.:.x..x.:x..::..x..:x.----.x.x...:.....-..x..:x..x.x.x....--:...:.:x..----...x..x....xx.:...-..x..x.x:xx.....x.:x..xx...--------:.x:...:.x.xx..----------------.x...::x:.x.xx..x::x:.:..x.x:x.x..---:x..:x..x....--.....:x..:xx.x....xxx::.:.x.:.:..x:x......:...-x.x.x..:..:.-------x...x.....x:::.:.:x.x..----...-..:.:...x.:-----:x....:..:.x:..:...xx:....x.x:.:.:..-:x:.x..:.x:..--...x..x.x......x:..x..x----.:.....x.:..x.....x..:...x..::....:.x...:.::...:.x....:.--.:.x.x....---....:..x.x.....x.......x..........------------------...x:...:......xxx:....x...x.............:.x........x...........:.....x:...:...xx...........x.:x:.x.x.:.:.....::-....:.......x.xx:..-..::..:x.......:.x.x:..:x.-----...---:.:x.............x.x:..--...x.xxx:..x.:x:.x..........::-......-....:.................-...::......:.x:.:.x.:..:.......-..:..............:......:...........:....:......x.x:..x....:.:x.x..:....::.:..x...............x.......:::..x...:x...:.x..x..:...:.:...x.xx.....:.x...:x:..:.:---------------------------------...:----...x.....:xx.....:.::.:x.---------.xx..:.x..xx:......x...xx.:x.:x...-------------...-.:..x..---.x:....:---.x:.::x...xx::x..:.....:..:.:x...xx::xx..:::x:..:x.x..------:...::.:.xxx...:.xx.....x-------.:..:.xx.xx.x......----.:..x...xx:::.::x...:...:.:..:-----------.:.:.x::.xxx.:xx.x..:.x.x.......:..x.-----------------------------:..::x..x.....:.x..xx..:x.x.:xx...---------------.:.......x:.....x.....:..x........x..:.......................x..x........x..x..:x....x..x..x..:..x...........:........xx.x......x.:........:..:..:.....:..:..:..:..:..:................. 103M5D6M9I18M8I4M4I7M24I6M5I20M10I12M2I9M23I9M10I10M9I6M3I7M50I18M23I12M2I10M15I10M16I15M4I12M1I11M5I4M2I48M2I175M33D10M4I8M19D14M9D16M10D11M4D16M8I22M8D12M3D13M8D10M3D11M9D17M2I10M4I8M6I39M28D15M9D13M8D24M17D16M25D8M2D19M8D26M9D24M1D4M2D21M1D16M18I15M14D10M18D13M7D9M4D5M4I12M10D15M5I14M2D13M5D10M1I20M25I24M4I13M1D18M2I10M4I18M1D27M8D15M16D34M3I13M2I46M1D12M7D23M4D3M1D11M5D36M1I13M2I23M4D56M2D10M3D34M18I112M1I19M1I26M5D3M3I23M2D30M1I6M1I22M1D31M1I157M33D4M4D25M9I34M13D3M1I7M3D8M3D54M6I25M7D19M4I30M11I37M29I34M15I184M 1673/2403 69.6% 2826/94230402 0.0% 828/2403 34.5% 4063357 NA +6815 chr4 + 190214555 20490617 20490616 20490828 212 GTTATATTTTAGACCCTTGTTTGTGTTTTTTCACATG---TTTTATAACCTAAGAAAAATTTTTGTATAATATCATGGAATGTTCTCAATATGTCTGATTGCTTTTTTAAAAAATTAAATAATGAAATGACTAACAGTTCGTTACTAACCACTTTTTTCTCTCTT--CACTTTTTCC----TTTCTGTTTTCTAGATGAGGAAGAAGGCAAGTTCACATTT chr4 - 94230402 16425953 16425952 16426167 77804236 77804235 77804450 215 GTTATGTTTCTGTTTCTTTTCTGTTTCAGTTTAAATAGTATTTTCAAATTCCAAATAAACTTTTGAATGATAT--TGCTATGCTTT-AATGCATCAGGTTGCTTTCT---GATATGAAATGATGAAATGGCTAACAGTTCATTACTAATCACATTCTGTCTGTTTGATATTTTTTCCTATATTCTTGTCTCCAAGATGAGGAAGAAGGCAAGTTTATCTTT .....:...:x.x::...x.:...x.:xx..:.x..:---....xx..:::x.:.x...:.....x..:....--..xx...:.:.-...:::..x.:.......:.---:.x..x....:........:..........:.......:...x..:.x:::x:..--:.:.......----..::...:.:.x.....................:.:x... 37M3I33M2D11M1D20M3D55M2I10M4I40M 145/206 70.4% 215/94230402 0.0% 15/206 7.3% 4064664 NA +11396 chr4 + 190214555 20491749 20491748 20491936 188 TTTCTTTTTTAGGTCACCAGTCATTTATGGCTCCTTCTTGTAGTGTTTTGCACTGCCCTGCCGCCTGTACCTGTAGCAACAATATCGTAGACTGTCGTGGGAAAGGTCTCACTGAGATCCCCACAAATCTTCCAGAGACCATCACAGAAATGTATGTGCCTGAAATTCTTTCTTATCTCCCCACCTTC chr4 - 94230402 16427840 16427839 16428020 77802383 77802382 77802563 181 TTCCTTTTGCAGGTCACCAATCATTTATGGCTCCATCCTGCAGTGTCTTGCATTGTCCTGCTGCATGCACCTGTAGTAACAACATTGTGGACTGTCGTGGGAAAGGCCTTACTGAAATTCCAACAAATCTTCCAGAAACCATTACTGAAATGTATGT-------AATCTTACTTTTTTTCATTCTTTC ..:.....x:.........:..............x..:..:.....:.....:..:.....:..x..:........:.....:..:..:.................:..:.....:..:..x..............:.....:..x...........-------.x....x...x.:.:.x:x.:... 157M7D24M 147/181 81.2% 181/94230402 0.0% 7/181 3.9% 4063909 NA +8829 chr4 + 190214555 20503936 20503935 20504477 542 GGCTAATATTCATTAAGCTGCTGAAGATATTTATTAAATTTGCAAAGTTCTGGAAACTGCAATTATAAAA--CAAATAATGCTGTAGGCTAAAATATGTTGGATCATTTTATGTAGAAATATATGAA---------AGATTTTAAT-GACATGATTTACTGCTAAAGTTGGAAGTAGCATT-----------------CCAAAAATA----------------------------GAAAGTACTTACTTTACAATTATATGTAATAGGC--AAGAT-------AATCCTTAACATCAAAGAAAAGGAATATTGTCTTCCTCCTTTT-----------------------------------CAAATGATG-----------------------GGCCAATCTTACCTATGAGGAGA-ATGTGTTGGCTAC--AGTGGACAACTTAAGATTCAGAAGCTAGTCATTCTGCCTCCCCTTCCCTTACCCCATTAAGACTATGCTCTATTCTGTGGCAGCTGCTTTTGCCATTTACGTTAAAAGCAGATGGAGAAAACGCGAAGAAG---TGTCAGTTTTATTGCCATGTATAATCAGCATCTGGGCTGTATGTTACAGACACAATCAATCCAAAG---ACATATTTTACTGGGTATTATAAAAACTTTTTGTGTTTCT chr4 - 94230402 16437028 16437027 16437657 77792746 77792745 77793375 630 GGCAAATATTTAAGAAAATGTCAACGAGATTTATTAA-TTTGCAGAATT--AGAGACTGAAATTCTGAAATGCAAGTCATATAGTCATTCCAAATACATC------TTTTGTTTTGCTAGATATGGATGATATCACAGATTTCAACAGAATTCTTTTGCTGCTATAGTTAGAAGAGGCATTTACTGGATATAAGCACTCCGAAGGTGTGATTGTTGAGAAAAGGGGGGGGGGGGGGAAGGTACTT------------TGTCTAATAGTCTCAAGATTCTTATAGATTCTTATGGAAAAGGGAGACCAATACT-TCTTCCTTATTTGAAAAACAaaacaagcaaacaaacaaaaaacaaaaacaaacaaCAACTACAAAAAACATCCCAAATCTGGCAGATGTTAAATATGGTGAGAGATGTGCTGGATGTTTACTGCAGCTCTTCAGATTCAGAAGCTA----CACTGAATCCCAT----------CACTGAAATT---TTCTGTTTTCTGACAGCTGTTTTTGCCATTTACTTTAAAAGCAGATGGGGAAAATGCAAAGAAGAGCTGTCAATTTTATTACCATGTATAATCAGCATCTGTGCGATACAT--CAGAC----TCATTGCACAGTTTACACTTCCTTCTCTGTAGTAAAAATTGTTTTGGAGTTTCT ...x......:.xx..:x..:::.x..x.........-......:.:..--:..:....x....x.:...--...:.x..::x..x:x::x.....::.:------....:.x.x.xx.x.....:.---------......:..:-..xx.xx...:......x....:....x:.....-----------------..:..::.:----------------------------...:......------------.:.x......x.--.....-------:..:....xx:xx..:.:.:.xx....:.-.......:x...x-----------------------------------....::.::-----------------------...x:..x...xx....:x....-.....:...x.::--.x..x.xxx...x..............----:x...xx....x.----------..:.:.:.:.---:...:..:.x..:......:.............x..............:.....:..:......---.....:.......:....................x..x:..::.--.....----...x.x..x..---...:x.::.x..xx...x..x...xxx....x.x...... 37M1D11M2D19M2I28M6D21M9I10M1I34M17I9M28I10M12D12M2I5M7I29M1D13M35I9M23I23M1I13M2I27M4D13M10D10M3D64M3I44M2D5M4D11M3I40M 359/497 72.2% 630/94230402 0.0% 178/497 35.8% 4066908 NA +9237 chr4 + 190214555 20505993 20505992 20506593 601 AACTGTCTTC-------ATCTTCTCATATACTGAGCATGTAACTAAAATTTCCTTCTACATTTGAAAGAGTAGTAAC--AGCCATTGCTTTGGTTTCATGTGTGTGTATATGTAAACACACAAACACATA-------CAGTGATAA-----------AATGTTATGCA-ATCATTTA-CATAAGTTATGTGGAGAAAAA---------GGTGTTGGCTCCTTTTACATGGAAAAGTCTTTCT-----TGTAGTATGTGA----TTTACAGTACTTTCTTCCCCTAATCACTTTCTAAATCTATTTTTACTTTGAAACTCAAGATATTGAATTTTCTCCGAAGGACTGACATTTGAAAATCTCTTAATTATGGTGGATTTTATCCATGGCATGCAAATATATCTTAGCGATTATACTATCTAT-TTTTGGAATCCCAGAATGTTTTTAATTAGGTTCTT-TATGGAACAATGGATTCAAATTTGCACTCTATAAAATTCAGCAGCTTCTATGCTATTAAAGCACAGATTACAGGACAGCAATGCTAGAAAATGTAAATTTTATTTGCCCTTTCTTTTTACCTCAACC------TGAAAACTTTAT-----------TATTTCACTTCTTTATTTTTTA---TAATCTGATTT-----AAATATGTTTTCCTCTTTT chr4 - 94230402 16438691 16438690 16439347 77791056 77791055 77791712 657 AACTGTCTTCCTCCATTATCTTATCTTAT--TTAATACACTGCTAAAATTGACCATGGCCTTTGAAAAAGAAACCACCAAGGTACTGTTTATGATACACAGATGATCATTTATAAAAAAAAAGAAAAAGAATGACTTCAGGAATGACTTTGAAAGGAGATATTATGCACAAAATTTAATACAATTTCCATGGAAAAATACTGATATTAGGTTTTTGTTCTTCTCTAAT--AATCGTACTTCTGACCATGTCATTTGTGAGCACTTAATAGCTGATTTTTTCAGTGATAACT----ACATCCCATTCTATTCCAGAATT-AAATTTTCTTATTTAATATGAGGAATTAA-----AGAGAGTTTTTAATTACTATGAGTTTTATCAGTACAATGCAAATCTCCTTTAGATATTACTTTATCTGTGCTTTGTGACCCTAGAATATAGCTAATTAGATTTTCCTCTGGAATGGTGGATGCAAATTTGCACTCTGTGAAATTCAGCTGATTCTACAAAGATAAAG--CAGATTAGAGGATAACAAAGCTTGAAAATGTGAATTTGATTTA--CTTTCTTTACAGACAAAGCAGGGTATAAAAGATTCTTCTGTATTTAGATAATCCTATTTTTTCTTTCTTATACTAATCTCATTTTCTAAAAATGTGATGTCTTTTATT ..........-------.....x..x...--.x.::.:::x:........xx.:x:x:.x.......:..x.::x..--..x:.:..:..xx.x.x..::x:..xx:..x.:....x.x.x.:.x.x.x.-------...x:..:.-----------:..:.......-.xx.....-:.:..x..x::....:...x.---------...x..x.:..:.:.:xx..--..xx..x:....-----...x:.x.....----..x.:..:xxx..:..:.xx.:..x...----.x...:xx..:..:.::::..:.-..:x.x.:xx....xx.x:..:.:.:.:.-----::.:.x:.:.......:x:..::.......x:.:xx........x.x::....xx....:x:.....:.-:....x:.:..:.....:.xx:.......:..:.:-.x.....:::.....x..............:.:.........x.x.....::xx:x.....--.......x....:.:...x...x........:.....x....:--........x:.xx:x..x.------.:...:x..:x.-----------..x.:.xx..:...x...:...---......x....-----....:..x.x..:.:.x.. 10M7I12M2D46M2I51M7I9M11I11M1I8M1I21M9I20M2D12M5I12M4I28M4D23M1D29M5D69M1I35M1I61M2D43M2D19M6I12M11I22M3I11M5I19M 382/583 65.5% 657/94230402 0.0% 92/583 15.8% 4067302 NA +3150 chr4 + 190214555 20506070 20506069 20506124 55 GCTTTGGTTTCATGTGTGTGTATATGTAAACACACAAACACATACAGTGATAAAA chr4 - 94230402 10898945 10898944 10898999 83331404 83331403 83331458 55 GCTTCTATTTTATGTGTGTATATATATATACACATATACACACATAATGATTAAA ....:x:...:........:.....:..x.....:.x.....:.:.:....x... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 9607125 NA +10215 chr4 + 190214555 20510489 20510488 20511145 657 TTGCAGACGTTTGGAACAGAACACAATCAAAGTCATCCCTCCTGGAGCTTTCTCACCATATAAAAAGCTTAGACGAATGTGAGTGAACAATATTCTACA------------------------ATATATGTAAT-----TTTA-------------AAAATTATAGAGGTCATGAGACCATGCAAAGAAACT----TAAG--TATGAGTATATAAGT--GTTTGACAGCTTAAATATTAAGTGATGTGACTGTCTGATTACTAGCTCTGTAATAATATTTTAATCTTAATATCTAAA-------CTATGTAATTTTTAAAGGTCTGTAAT---TTAGCATATTGATT-------CATACAAATGTGAATGT----------TTATGGTCAATAT-------ATTTTGC---ATATGAACATATGTTCAGGTGTTCTATTGTCAAAAATAAGACATAGCATCTTATATGGGAAAGTAGA-----CAATGGTTATTTTAAAAAGTAT------GATTTCTTTTT-----TAAATTTCTGATCCTTCAGATGTTCAATGTTGCACGTTTTGGACA-TGTCTTG-ATAAGTA-----------------CAAAACCAACATTTAA--AAGCCATACATAGCTTTTTCCGCAGTAAATCTCACTGACATTTGATTGAATGTAACCTAACCCTATTTCTAATCTTAGTGACCTGAGCAATAATCAGATCTCTGAACTTGCACCAGATGCTTTCCAAGGACTACGCTCTCTGAATTCACTGTAAGTAT chr4 - 94230402 16448423 16448422 16449172 77781231 77781230 77781980 750 ttGCAGACGGTTAGAACAAAATTCAATCAAAGTCATACCTCCTGGAGCTTTCTCACCCTATATAAAGCTTCGAAGAATGTAAGTACCCAATATTTTAGATTTAAATtacatatatacacatgtatatatgcaatatatatttgtgtgtgtatatatataaatatGGAAGT-----AAAAATACAGAGGAACTACCATCAGCATGTGAGCATATGAAGAAGTTTGACTGCTGGAAGATTAACAGATATGGTAGTCTGGTTACAAAGACCA-GATAATCTCTTTATCAGACTAGTAATAATTGTTTCTACCAAGTTTTAAAATTACTGAAATACGTTATTACAGTGAATGTAAGAAAAAAAACATGGGAATATGCCACTCTCATTTCGG--AATATCCTTGAGGTTCTGTCTGATCTGGCTACAGGACCATATATAATTCTGTACAAAA-GGTACTTATTGTATTA---GGAAAAGTAAGTCTATTAGTCTTCATTTTTTAAACCATTTGAAAGATCTATTTTTAACCATTAATTT----TGTTTCAGTGGTTTTATTTTCAAATTCTTTGGCAGTGTCTCACACAAGTATTTTAATTTCTCTCATTCCACCCCTAATTCTAATTATTTCAGTCTTTGCTTTTTCAAAAATAG-----------CTTGGATTAACTGTA--TGAACTTTCATTT--ATTTCAGTGACCTGAGCAATAACCAGATCTCTGAAGCAGCTCCAGATGCTTTCCAGGGCTTACGTTCTCTCAATTCACTGTAGGTAT .........x..:.....:..:x.............x....................x....x.......x..x......:...:xx.......:..x.------------------------.......:...-----...:-------------.x..x...:..:..-----:.xx..:..:..:....----.x..--.:....:....:.:x--.......x...x:..x.....xx...:..::x.....:....x.:xx.::-:.....x.:..x...xx.x..x:x.x.-------...:xx.:....x...xxx...x...---...x:.:.x...x.-------x.x.x.x...x....:.----------..x:..--.....-------:..:..:---..x..:x:.:.x.x:..x:.:.xx.x:...xx....-::x..x..x::.x...---..:......::-----:.:.xx.:.....xx...x:..------...:.x.....-----.x.....----.x:.....xx...:x..x..xx.xx.:..x.:..-.....::-.:.....-----------------.x.xx..x.xx.:...--.xx:..xx.x.x........x:x.:..:-----------x..x....:.x....--:x...::.xx..:--..:.:.................:............x:x..x..............:..x:....:.....x...........:.... 99M24I11M5I4M13I14M5D17M4I4M2I15M2I50M1D27M7I26M3I14M7I17M10I6M2D5M7I7M3I36M1D16M3D11M5I22M6I11M5I7M4D34M1I7M1I7M17I16M2I28M11D15M2D13M2D87M 439/626 70.1% 750/94230402 0.0% 155/626 24.8% 4062066 NA +10744 chr4 + 190214555 20510489 20510488 20511145 657 TTGCAGACGTTTGGAACAGAACACAATCAAAGTCATCCCTCCTGGAGCTTTCTCACCATATAAAAAGCTTAGACGAATGTGAGTGAACAATATTCTACA------------------------ATATATGTAAT-----TTTA-------------AAAATTATAGAGGTCATGAGACCATGCAAAGAAACT----TAAG--TATGAGTATATAAGT--GTTTGACAGCTTAAATATTAAGTGATGTGACTGTCTGATTACTAGCTCTGTAATAATATTTTAATCTTAATATCTAAA-------CTATGTAATTTTTAAAGGTCTGTAAT---TTAGCATATTGATTCATACAAATGTGAATGTTTATGGTCAATATATTTTGCATATGAACATATGTTCAGGTGTTCTAT------TGTCAAAAATAAGACATAGCATCTTATAT--------------------GGGAAAGTAGA-----CAATGGTTATTTTAAAAAGTAT------GATTTCTTTTTTA-AATTTCTGATCCTTCAGATGTTCAATGTTGCACGTTTTGGACA-TGTCTTG-ATAAGTA-----------------CAAAACCAACATTTAA--AAGCCATACATAGCTTTTTCCGCAGTAAATCTCACTGACATTTGATTGAATGTAACCTAACCCTATTTCTAATCTTAGTGACCTGAGCAATAATCAGATCTCTGAACTTGCACCAGATGCTTTCCAAGGACTACGCTCTCTGAATTCACTGTAAGTAT chr4 - 94230402 16442688 16442687 16443435 77786968 77786967 77787715 748 TTGCAGACGGTTAGAACAAAATTCAATCAAAGTCATACCTCCTGGAGCTTTCTCACCCTATAAAAAGCTTCGAAGAATGTAAGTACCCAATATTTTAGATTTAAATtacatatatacacatgtatatatgcaatatatatttgtgtgtgtatatatataaatatGGAAGT-----AAAAATACAGAGGAACTACCATCAGCATGTGAGCATATGAAGAAGTTTGACTGCTGGAAGATTAACAGATATGGTAGTCTGGTTACAAAGACCA-GATAATCTCTTTATCAGACTAGTAATAATTGTTTCTACCAAGTTTTAAAATTACTGAAATACGTTATTACAGTGA---ATGTAA--GAAAAAAACCATGGG-AATATGCCACTCATTTGGGAATATCCTTGAG-GTTCTGTCTGATCTGGCTACAGGACCATATATAATTCTGTACAAAAGGTACTTATTGTATTAGGAAAAGTAAGTCTATTAGTCTTCATTTTTTAAACCATTTGAAAGATCTATTTTTAACCATTCATTTTGTTTCAGTGGTTTTATTTTCAAATTCTTTGGCAGTGTCTCACACAAGTATTTTAATTTCTCTCATTCCACCCCTAATTCTAATTATTTCAGTCTTTGCTTTTTCAAAAATAG-----------CTTGGATTAACTGTA--TGAACTTTCATTT--ATTTCAGTGACCTGAGCAATAACCAGATCTCTGAAGCAGCTCCAGATGCTTTCCAGGGCTTACGTTCTCTCAATTCACTGTAGGTAT .........x..:.....:..:x.............x....................x............x..x......:...:xx.......:..x.------------------------.......:...-----...:-------------.x..x...:..:..-----:.xx..:..:..:....----.x..--.:....:....:.:x--.......x...x:..x.....xx...:..::x.....:....x.:xx.::-:.....x.:..x...xx.x..x:x.x.-------...:xx.:....x...xxx...x...---...x:.:.x...---..::..--.x:..x:x::....x-.....:::x:x...x..::x....x:.:::.-.....:.------..x.x.x.:x.xx.:...xx..::.:..:--------------------..:......::-----:.:.xx.:.....xx...x:..------...:.x.....x.-x...:x.xx.x:.....xx...:x..x..xx.xx.:..x.:..-.....::-.:.....-----------------.x.xx..x.xx.:...--.xx:..xx.x.x........x:x.:..:-----------x..x....:.x....--:x...::.xx..:--..:.:.................:............x:x..x..............:..x:....:.....x...........:.... 99M24I11M5I4M13I14M5D17M4I4M2I15M2I50M1D27M7I26M3I12M3D6M2D15M1D31M1D7M6I29M20I11M5I22M6I13M1I43M1I7M1I7M17I16M2I28M11D15M2D13M2D87M 435/629 69.2% 748/94230402 0.0% 147/629 23.4% 4067801 NA +3452 chr4 + 190214555 20518164 20518163 20518231 68 TATACATATATTTATATATATACATATACATACATATACATATATTTATATATATATACATATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:..:....xx::......:..:...x........:x....:.::.:...:.:..:....:..:.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -27648874 -66581528 +3492 chr4 + 190214555 20518205 20518204 20518272 68 ATATTTATATAT-ATATACATATATATGTGTGTGTGTATATATATATATATATTTTTTTTTTTTTTTGA chr4 - 94230402 8681917 8681916 8681985 85548418 85548417 85548486 69 ATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA ....::..:.x.-.....x........:...:..:::.:.:...:.....xx.:............... 12M1I56M 52/68 76.5% 69/94230402 0.0% 1/68 1.5% 11836288 NA +3015 chr4 + 190214555 20518550 20518549 20518607 58 CCTATATGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735346 92735345 92735403 1495000 1494999 1495057 58 CTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .:.::..:.x.....:...:..:.:..........x.x..:.x.........:.x... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -72216796 -22013606 +3175 chr4 + 190214555 20518552 20518551 20518604 53 TATATGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681931 8681930 8681983 85548420 85548419 85548472 53 TATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ....x:.........:...::.:.:.:...:.....x:.:............. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 11836621 NA +3627 chr4 + 190214555 20518556 20518555 20518611 56 TGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x.....:...:..:.:...............:.x.........:.x... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% -72216792 -22013610 +3144 chr4 + 190214555 20518557 20518556 20518622 66 GTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865453 4865452 4865518 89364885 89364884 89364950 66 GTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ...x.x..............x.:x.x...x.xxx.:.........x..x....x..........:. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 15653104 NA +3162 chr4 + 190214555 20518558 20518557 20518609 52 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x.....:...:..:.:..........x....:.x.........:.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -72216794 -22013608 +3167 chr4 + 190214555 20518558 20518557 20518623 66 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681944 56681943 56682009 37548394 37548393 37548459 66 TATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTGGTCTG .....x:.:....x:.:...:....:..x:.......x...x...x....x.........xx.:.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -36163386 -58067016 +3282 chr4 + 190214555 20518558 20518557 20518613 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -72216790 -22013612 +3017 chr4 + 190214555 20518559 20518558 20518618 60 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.x.xx:.........x..x....x..........:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 15653100 NA +3152 chr4 + 190214555 20518559 20518558 20518619 61 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681943 56681942 56682003 37548400 37548399 37548460 61 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ......x:.:....x:.:...:....:..xx.......x...x...x....x......... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -36163384 -58067018 +3068 chr4 + 190214555 20518560 20518559 20518615 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -72216788 -22013614 +3163 chr4 + 190214555 20518560 20518559 20518623 64 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 4200274 4200273 4200337 90030066 90030065 90030129 64 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGTTATCTG ..x............:.:.:..............::...:xxx.......x...:xx..x.:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 16318286 NA +3231 chr4 + 190214555 20518561 20518560 20518620 60 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.x.x.:.........x..x....x..........:. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 15653102 NA +3061 chr4 + 190214555 20518565 20518564 20518630 66 ATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 45067213 45067212 45067278 49163125 49163124 49163190 66 ATTTATTTGGATATATACGTGTGTTTGTTGGTTTGTTCTTTTTTTTTTTTTTTCTTTCTGGAGGGA ..x...x.:x.......::.:.:...x..xx...x..:...............:...:x:..x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -24548648 -69681754 +5983 chr4 + 190214555 20519379 20519378 20519463 85 CAGTGTCCTCTATGGAAATAAAATCACAGAACTCCCCAAAAGTTTATTTGAAGGACTGTTTTCCTTACAGCTCCTGTAAGTATTT chr4 - 94230402 16449683 16449682 16449767 77780636 77780635 77780720 85 CAGTGTCCTCTATGGCAATAAAATTACAGAACTTCCAAAAGGCCTATTTGAAGGACTGTTTTCTCTGCAATTGCTGTGAGTATTT ...............x........:........:..x...:.::...................::.:..::.x....:....... 85M 71/85 83.5% 85/94230402 0.0% 0/85 0.0% 4069696 NA +5983 chr4 + 190214555 20519379 20519378 20519463 85 CAGTGTCCTCTATGGAAATAAAATCACAGAACTCCCCAAAAGTTTATTTGAAGGACTGTTTTCCTTACAGCTCCTGTAAGTATTT chr4 - 94230402 16443946 16443945 16444030 77786373 77786372 77786457 85 CAGTGTCCTCTATGGCAATAAAATTACAGAACTTCCAAAAGGCCTATTTGAAGGACTGTTTTCTCTGCAATTGCTGTGAGTATTT ...............x........:........:..x...:.::...................::.:..::.x....:....... 85M 71/85 83.5% 85/94230402 0.0% 0/85 0.0% 4075433 NA +11484 chr4 + 190214555 20522089 20522088 20522369 281 TTCTCTCCTTATATAATAACACGCTTCAGACCATCACCAAAGGGACCTTTTCACCTCTTCGGGCCATTCAAACTATGTATGTATA-AGTGATTTG-GATCACAGTTG--ATGACATTGTTTCC--------ACTCTGAATGTAAGA----GTTGAGTCCATTGC-AACTCATCTATAAAACTGTCCTGTATGTGTTTCCAAAGGCATTAGGCCCAGCACCCCTTTATTTGTGACTGCCATCTCAAGTGGCCAGTGGATTATCTCCATACCAACCCTATTGAGACCAGTGGTGCCTGTT chr4 - 94230402 16451651 16451650 16451948 77778455 77778454 77778752 298 TCCTATCTTTATATGACAACAAGCTTCAGACCATTGCAAAAGGCACCTTTTCACCTCTACGTGCAATTCAGACCTTGTACGTATGCATTTATTTATGGTCATCTTTGGTATGACTTTTTATTCTACAGTGCACTAAAAATATCAGAAACTGCTGAGACTAAAGAGAAATAATGTGTGAAATTATCTTTTTTTCTCCATGAAAGGCATTTGGCTCAGAACCCATTTATCTGTGACTGCCATCTGAAGTGGCTGGCGGATTATCTTCATACAAACCCCATTGAGACCAGTGGTGCCCGCT .:..x..:......:.:....x............::.x.....x..............x..x..x.....:..:x....:....:-.x.x....:-.:...:xx...--.....x..x.x.:.--------...xx:...:.x...----.:....x.:.xx.x-..x.x..x.:.:...:.:..:.x.x.x:x::x:x.........x...:...x....x.....:..............x.......::.:.........:.....x.....:..................:.:. 85M1I9M1I11M2I14M8I15M4I14M1I133M 209/281 74.4% 298/94230402 0.0% 17/281 6.0% 4070438 NA +44367 chr4 + 190214555 20523664 20523663 20526005 2342 TATATTTCTTGACTGGGTTTCCTTAAAA--AGCACAAAATCTTGCAGGTGA-----------GTTAATAAGATGCTACAC-------TTTAATTCTACAACTATTT--AATCAAACAGATTATTGAATGCCAACAAGATAAACTGCCTTCGGGTAGATGCTTTTCAGGATCTCCACAACTTGAACCTTCTCTCCCTATATGACAACAAGCTTCAGACCATCGCCAAGGGGACCTTTTCACCTCTTCGGGCCATTCAAACTATGTATGTATA-AGTGATTTG-GATCACTTTTG--ATGACATTGTTTCCT--------CTCTGAATGTAAGA----GCTGAGTCCATTGC-AAGTCATCTATAAAACTGTTCTGTATGTGTTTCCAAAGGCATTTGGCCCAGAACCCCTTTATTTGTGACTGCCATCTCAAGTGGCTAGCGGATTATCTCCATACCAACCCGATTGAGACCAGTGGTGCCCGTTGCACCAGCCCCCGCCGCCTGGCAAACAAAAGAATTGGACAGATCAAAAGCAAGAAATTCCGTTGTTCAGGTAATTTC-----TTCACGTGTTATTTCCCCTGTGAC--CAACAACAATGGTTACATGAGACCTAACAAAAGCAGCTGGCCTTCGGCTG-ATTAGTGAACACTGTAGAATCATATTTCTTTTTCTTCTGCCCATGAA-TAATAAAA--TAAAGAGGACTGTAGACCCAATTCAAATAATACTTCTATATGTAACATTT-----TAACACCATATACAGCAGAAGAAATAGGCAATTGACCAAGTTAAAAAGATGCCTAGATACTTCATAGTACCTTTCCAAAATTCAAACTTAACCAGAGCCTTATAGCTAACTCAGAATACCTTTAAAGTATGTTAAGTCTCATGTTTGTTGAATTGACCAGCCTCAAGTAATTAACTGTGTTTTCATTTCTTCAGAAAGTGAATTGAGACTTGGTTACATGATTTGTTTGGGCTCAGAAGTACAGGGGCGCCAGGAGGGACTCCAGATCCCTTGCTTCTTACTCTGAATGCACTTTCTCAGTTTGCATTCTCTTATTTTGCATACAACCGTGAGGATGCGTTTTTTCCAAAAGCTATTTTTAAAAATATTGTGGGAATATTGCATTTATTTGTAAAAAGCTAAATATG--AATGCATTGTATTGATATTAAATGAAAGGCTGCCATC--ATTCAAATTTACTGTTTGCTTTGATCTAATATT-TTCCTTTTTTATGATAGAATATTTTATGTCTT----TTTGGTACTATGCTACCTAACTATTCCAGGCGTATTTCACATTCGGCAGTTAATTTCATACTAAAAAGCTAATATAAGAACCAAGCTGGTTATTGTCCATAATTATAGATGCATTTACTACTCACTGTACATTATTGTACTTCAGTCACAGCTGTGAATATACA-TTTTTCACTTAATTGCAGTAACTTTAGTCCATTCTTAATCTAATATAACTCATATCTCTGCTTGCTGACATTCAGGTGCATCTTCTATTTTTTGTCTCTTTT-----TTTATTTAGCTAAAGAACAGTATTTCATTCCAGGTAGGTTTTGCTCGGTAGTAG----GACTAACTACAGACACCCTTTCCTCACCTTATAAAA----------TATAGCTTCTA--AAACTGATATGCATGCTTCTGAAAGTACAGTGGATACTCTATAGATAG--ATTGACTTATGCATATATCACTTGTAG--CTGTTTCCTGAAATCCTGACCTTTGCATGCAGCTTCTGATGTTAAACATATATTATTAAACTCCACCTTTTCTTCTCTTTCTTTTACTTTGGCGCATTATCT---AAAATTTCTCACAGTAGCTAAAATGTT---------TGAAGCTATGGCTTTCTACTTAAATCATTTTCTCTCCTTACATTGTA---TATCTGATCTTCCAAC-CTGTTTTTAAAATATAGCTAATTGAGCTGGTTTTAAAGACA-GAGATCTTTCTGATGTCAAAGAGCTAGTTCTACATGAAATCAGTTACACACAGAATTTCATTTTCAATCATGAAAATTACTTTTTTATAGATTCTTATATTTAAAAACTGTACTTATTGCTTTACTTT--TGCTT--CACTGTTTATAGAAAAACAGCAACTCCCTGCTGAATTATATGCAGTTGTTTCTTATTTGTTTATGACTTTACATTCTTCTATATCCAGAATTACAATATAACTCCATAAAAAAGAATATTTATGTGTGATGTGAAAGCATCAGAAGTTCATGGGCACAAAATGCCTTGAATAATTTAGGCAGATGGATAAAATGT---TTCTAAG---------AAAAGTAAT---CGCAATGTTTTACCACTTCAAT-----CGTAACACTATCAAGACTGA-----TGATTCTAGAACTAGCTCTTTAAAATACGTTTCTTTACTTATTTTTCCTTGCCTGCCAATTGTGTAAAATG chr4 - 94230402 16451468 16451467 16453529 77776874 77776873 77778935 2062 TACATTGCTTGTTGTGATTT---TAAAATTAGTACAAATTTTTACATGTGAAAAATATCAAAGTTGCAGTGACACTGAACCAACTCTTTTGATTTTATGATTATCTTCCATTAAACAGATTATTAAATGCCAACAAGATCAATTGCCTGCGTGTTGATGCTTTTCAAGATCTGCACAACTTGAATCTCCTATCTTTATATGACAACAAGCTTCAGACCATTGCAAAAGGCACCTTTTCACCTCTACGTGCAATTCAGACCTTGTACGTATGCATTTATTTATGGTCATCTTTGGTATGACTTTTTATTCTACAGTGCACTAAAAATATCAGAAACTGCTGAGACTAAAGAGAAATAATGTGTGAAATTATCTTTTTTTCTCCATGAAAGGCATTTGGCTCAGAACCCATTTATCTGTGACTGCCATCTGAAGTGGCTGGCGGATTATCTTCATACAAACCCCATTGAGACCAGTGGTGCCCGCTGCACCAGCCCCCGCCGTCTGGCAAACAAAAGGATCGGCCAGATCAAAAGCAAGAAATTCCGCTGCTCAGGTAATTTTCTTAGTTCAGCTGCTGTTTTTCTTTTATTGGCAAAAACAGTGGTTTTAGAAGTTCTAATGAAAGCAGCTGGCTCTCTACAGAATTATTAAATGTTGCAGAATC-----TCTTTTAGTTCTTCAGTTGAAGTCATGGAAGTCATAGACGATTGGAACATTACTACAGTTAACACGCTTG---GCACTCTTTCTGAGTAGCATTAAATCTAACAAAAGAAAT--GCAATATAT-------------------AATACTTCAGAAT--------GAAATGC---------------------------------------TGAAGT-------------TATTTGCTGCAAGTATCA--CTGACATAAATCATTTTGT------------AGAA----------------TTTCCACGA--------GGCTCTGGAGTACATGAA----------------AGATC-------------------------------------------------------------------------------------------TAAAAATTTCT--------------------------AGCTAAATATGGAAATACGATGTATTCCTTTTATACAGGGAGCTTACCTCAGACTGAAATTTACTGTTTTCTTTT-TCTAATCTTATTCCATTTCCTACTTACATTTCTCTAAATCCTTAACTTTTGTCATATGGTATCCAGCTGTTCCAGGTGCATTTCACATTCTACAATTTA-TTCAGTCTCAAGTGCAAATACCGGATGAGAACTGTTTGTTATCCAT-GTTTCAGATACATTTATGACTATTCACACTTTGTTGTTTATCACCTCTTGTTGTGAATACACATTTTTTCACTTAGT-----TAACTTTTGTCCATACTTATTCTAATAAAACTCAT-TCTTTGCTTGCTGACATTCAGGTGCATCTTCTATTTTTTTTTTTTTTTTTCTCTTTATTTAGCTAAAGAGCAGTATTTCATTCCAGGTAGGTTTGGCTCTGCAGTAAGATTGACTAACTGCAGATACTCTCCCCTTTTTCCCCAAAAAGCAGTTTGTTATAGCTTTTAGGAAATTG--ATGCATGTCTATTAACA-AGAGTGAATAC-CTATAGCTAGACATAGTTTTCTTTGTAGATTACTAGTAGTTCTGTTTTCTGGA--TAAGAGCTTAGCATGCAGCTCC---------ATTTATGTT---------------------TTTGTCTTACAAATTTGCACACAACCTACCAAAATTTGT-----TCACTTAAATTTTGTAGAAGGCTGTACCTGCTAGTTGATATTTCAATTGATGCCTTTATTTGCCATCTACCTTGCCTTTTCTGCTACTACTGTTTTTAAAATGTAGCT-CCTGAGCTGCTTTTAAACACAGGAAAACCTACTTCTGTCAAAGAGCTAGTACAACTTAAA-----------ACAGACTTTA-----CAA--ATGAATGTT-----------------------------------TTCTTGCCTTGCTTTCATACTTTACACTGTCT--------TCAGCTACTGCTTGCT----------CACTCTCCTCATGTTTG--------------------------CCAAATCACAGTGGAA-TGCTTGGAAAAGAAAGCTGATAT-TCAT-TAAAGGCATTCTGTGGTCACATGCATACAGTGAATCAGA-AATGCATTCCCTTAAAGAAAATATGACTTTTGAGTTGGGTTGAAAGAGTAATTTACACACTGCTTT-CAGCTACAATGAGTCTATGATATTTTCAGGAAAGAGTCACTTATGTTGGCCCTAGCTCTTTGAAATATGTTTCTTTATTTATTTTACCTTGCTTGTCAGGTGTGTGCACTG ..:...x....x:xx.:...---.....--..:.....x.:..:..x....-----------...:xx:x..::..:x..-------...:...:..::.:...:.--x..:............:..............x..:.....x..x..x...........:.....x...........:..:..x..::.........................:..x..:..x..............x..x..x.....:..:x....:....:-.x.x....:-.:...::....--.....x..x.x.:..--------..xx:...:.x...----......x.:.xx.x-..:.x..x.:.:...:.:.::.x.x.x:x::x:x.............:........x.....:..............x........:...........:.....x.....x....................:.................:..............:..:..x.......................:..:...........:-----....xx..:.:...::.:.x.:x:--...x....:.....x:.x:..x:....::............::..x:.x.-....x.:..:::..:......-----......xx....x.xxx....-.x..::..--:.x...x..:..x.:xx::.x.x..:x...:..x::.:---.:.x:x...-----..:..::.x..x:.:..:.......--.....xx.:-------------------:........x.:.--------:....x.---------------------------------------.:....-------------.:....:..x.xxx.:..--..x.x:...x.x.:.x...------------....----------------x..x..:..--------.....x.:......x.::----------------.....-------------------------------------------------------------------------------------------.......x.:x--------------------------...........--...:.:x......xx.x...x.::::::...xx.x..--.:.x.............x....x-......x..-....x...::xxxx..x.x.x:.:..x:..:.----...x..xx....x..:.:.:..:.......:.:...........x:..:..x.-....xx..x..:x..x....:x:..xxx:.:...x..:..:.....-:..x:....:......:x...xx::::..x..:....x:x...x::x:x.:........:...-...........:.-----.......x......x....x.......x.......-...:...................................x.:.:....-----................:........................x....x.:....:----........:....:..:..::...:x::::x:....----------........:..--...:..--.......::.x.x..x:-.x....:....-......x...--..x.x:..x.x::..x..:...x....--......:...:.--:xx..x...x..........:.---------.:x...:..---------------------.:.x....x:.xx..x..:..:x.:..---.......x.-----.x:..x....x..---------..x.x..::x:x..xx..:..x...::x.x:..:.x:..:.xx.x..---.::..xx...x.:.x:-.............:.....-x:.......x.......x...-..:.x.:.x..xx...............x.x..x.:..-----------.....x...x-----...--.....x:..-----------------------------------..x....:..:....--.:...--......:.--------x....x...x.:....----------..x.:x::..x.:....--------------------------.x:...:...:.:x..-.x.x.::.......x::.x..:.-.x..-.:..:....:xx:x.x...::x...:.x.:..xx.:::.-...x:.xx.xxx.::.x.....:.---..:.:..---------..:......---.:..x..:...-.x:..x....-----::.:.:.:.x...:..xx..-----.x..x:.:.xx..........:.....:.........:.......x......:..:..:x.....:x.x.. 20M3D5M2I21M11I18M7I19M2I163M1I9M1I11M2I15M8I14M4I14M1I210M5I24M2I50M1I21M5D21M1I8M2I38M3D9M5I25M2D9M19D13M8D7M39D6M13D18M2D19M12D4M16D9M8D18M16D5M91D11M26D11M2I37M2I23M1D9M1I32M4I53M1D46M1D63M1I13M5D35M1D48M5I54M4I36M10I11M2I6M2D17M1D11M1D10M2I27M2I12M2D22M9D9M21D27M3I9M5D13M9I47M3I16M1I19M1D21M1I38M11D10M5D3M2D9M35D15M2I5M2I8M8D16M10D17M26D16M1D23M1D4M1D39M1D24M3I7M9I9M3I11M1D10M5I20M5I71M 1397/1926 72.5% 2062/94230402 0.0% 552/1926 28.7% 4072196 NA +54798 chr4 + 190214555 20527768 20527767 20529256 1489 GAGCTTAGTTTTATAAATATGTATATTAATCTTAATTGGGATTACTCT----TTCTTTCCTTCTTGGTGATCTTTACTTTTGCAGGAATTCACCATTTTGGCTGTAAGTAAA----AGTGTCTGATCTGAAACATAATACCCTCCCTTTTCAATCCTGATGTACCTTCTTCTAGTCTTGGTCTTTGGCACCTTTTTTTCAAGAAGAAACCACAGATCTTTTGAGCTTCTCT--GTTGTCCTTGTAGCTCACCTTCAACTTCTTCCTGGATGTTGT-TCCCGAAAGCTGTT------GTTTCCATTCTGCAGTTCTGAGGAATGGTGGAGGCACCTTTTCCATATAGCCCCTTCTTT-------------------------GTGTTTCCAGGAA-------ATCATCGGTAGTAATACTCTTACTGTGGTCATAAACATTCTGCGGGAAGAATGC-ATGTCATGTAAACA-GTATTACGTTTCCAGAACGTCTGTAGCTTTTCTCCTCCTTCCCTCCATTTTCCTCTTGGTCTTACCTTTGGCCTAGTGGTTGGTGTAGTGATAATGTAGCGAGATTTTCTGTTGTGCTTGATCTAACCATGTGGTTGCGAGGTATGAGTAAAACATGGTTCCGTCAAGCACCATGGAACGTCACGCAGCTTTCTACAGCATGACAAGCTGCTGAGGCTTAAATCAGGATTTTCCTGTCTCTTTCTACAAAATCAAAATGAAAAAAGAGGGCTTT---TTAGGCATCTCCGAGATTATGTGAGAGGGAGAGAATAGTAAAAAGTCCATAGAAAATTTAAAAGCCTGAGTATATCTATTTGCCTTGAAAGCCCTAATTTACAATGAGATATAGGATCATGTTTAT-TACTGGATATATTTTCAATTCTTGACTCCGAGAAAAAAAATAAACTTTTTAATAATTAATATCCATTGTGTGACTAGCTGTGAAGTAGGCTAGAATGACTCAGAATTGGATCAGCAGAAAGTACAGCTGTGAAAAGCTCAACTTTATTAATGTTTTCCTGTCATGTGAATCTGGTCACTCTTTTTTCCAGAAAATTCCAAGCCTTTCTTTTAACCTTTCTCCTGACATCC-----------------------ATTGACCA-AAATACCCCAAGTTGTCTCCCTGCTACATAATCTATAGTTATCTTACTTTTTTCTTCCTACAAACTAATAAATTTTCTAACCTTTAGACTCAGTATCTTTTTTTTGGTTTGAATTCTCAATAGGTACAGAAGATTATCGATCAAAATTAAGTGGAGACTGCTTTGCGGATCTGGCTTGCCCTGAAAAGTGTCGCTGTGAAGGAACCACAGTAGATTGCTCTAATCAAAAGCTCAACAAAATCCCGGAGCACATTCCCCAGTACACTGCAGAGTTGTAAGTTCATCCCCCAACAAAATTCTGGTTGGGATGGAGGGA----ATGAAAGCATTAA----AGCATAAGAATGTTTGTCTT-------------GCCATTTTTATTATTAATAATTGCATTAATTTTAATTAATATGCATTACAT-TGGCATAACTCTATTTTGTACAAGAATATAT chr4 - 94230402 16455058 16455057 16456593 77773810 77773809 77775345 1536 GAACTTAGTTC---------ATGTTTTTGTCTTAATTGGGATTACTCTGTCTTTCTTTCCTTCTTGGCTATCTTTACTTTTGCAGGAGTTCACCATTTTGGCTGTAAGTAAAGTTCAGTGTCTGAGCTAAATCACAATGTACCTCC----CAGCCCTGATGCACCTTCTACTAGTCACAGTCTTTT-CACCTTTGTC-CGAGAAGAACCCACAGGTCCTTTCAGCTTCTCTTTGTTTTCTTTGTCACCTACCCTCAGTTTCTTACTGGATGTTTTCTCCTGATA--TGTTTAGGACGTTTTCTTTGACTGACTCTGGGAAATGGTGGAGGAAACTTT-CAATGTGGTTCTTTATTTTTTTTCCTTTtgtgtgtgtgtgtgtgtgtgtgtgtgAATTATTTAATCTGTGACAGTAATACTGTTACTGTGGCACTGGACATTCAGTAAAAAGAATGCCATGTCATGTAAGCAAGTATTAATCTTCAAATGTTTCTATAACTTATACCTGC--TCCTTCCTCTTTTCCCTCACTGTTACCCTTGGCCTAATGGATGCAGTTTTGATAATGTAGCGAGATTTTCTGTTGTGCTTGATCTAACCATGTGGTTGTGAGGTATGAGTAAAACATGGTTCTGTCAAGCACCATGGAACGTCACGCAGCTTTCTACAGCATGGCATGCTGCTGAGGCTTAAGTCAGGATCACACATTTTCTT-----AAAATTAAAGCT-GAAGATAGGGCTTTCAATCTTACGTGTTCAAGATAATGTGCAGGGTTGGGACTGCAAAAAA------AAAAAATCACAGAGGTTAATGAAGTCC-----TGTTAACAATACAAATTTGTAGCGCGAGAAAGAGAAATGGTGGCATTCAGGATCTATTT---ATTCTTGCTGCAGAGAAATAAAATAAATTCTATAAGAATCAGTGGCATTTGTGTGATTAGCTATAAACAATGCTAGATTGGCTGACAACACAATCAGCAGAAAGTACAGCTGTGAAAAGCTCAA----GTTAATGTTATCCCGTTATGTGAAGTTGGTCAGTTTCTTTTTCCAGCATATCTAAGCCCTTATATTTAACCCTCTCTTGAAGCCCCTGTGTCTGTTCAGTATCACGAAATTTATCATACATTTCCCAAGTTGCCCACCTGTTACCTGCATTGCAGATATCTT--TTCAACCTTCTCACAAGA-AACAAATCTTATACTTTATTGACTCAGTATCTGTATTTTGACTTGACTCTTCCACAGGCACTGAAGATTACAGATCCAAATTAAGTGGTGACTGCTTTGCAGATTTGGCTTGCCCTGAGAAATGTCGCTGTGAAGGGACCACAGTGGACTGCTCCAATCAGAAACTCAACAAAATTCCTGATCACATCCCACAGTACACAGCAGAGTTGTAAGTTGAACCTACAAAGCATTATTTGCT--GATGGAAAAACTACCTAAAATTATCAAATACAAAACCACAGCTTCTGTTTTTTGAATAACAGAAattatatatattatatataattatatatattattatt-atatatattatatattatata----tattatatatatatatatat ..:.......:---------:.:.x..x:...................----...............:x..................:........................----.........x..:..x..:...::x.::..----..::.......:.......x......x::......x-.......x.:-.:.......x......:..:...x.........--...x..:....x:.::...:...::.....x.........x.-...:..x.--....------....:.x..xxx::::....:.:...........x.x....-.x..:.:.::.:..x...-------------------------....x.x::x...-------...xx:.::.........x.........:xx.::......x.::::........-...........:..-......xx:...x.:x::x...:..:...x.x:.:x.--...:...x:...:.:..::x.x.....:........:...x..xx..xx.................................................:.......................:........................................:..x...............:.......:x:x.xx.:....-----.....:...::x-:..:.x........---.:xx:.:.x.:.:....x.....x::..xx.:..x.:xx.....------.:.....:xx.:..x:.:.xx.x:..:-----:x..:.x.::x.x.....::.::.x..x.x..::xx...x.x::-.x.x....x.....---.......x:x.x......x........:.:.x...x...:.:.:x.xx........:.....:.:..xx.x......x..:..x.x..:xx:................................----:........x...:..:.......x:......x.:.:....:.x::x.xx..:.....:..x.x..x.x.::....:...x::..-----------------------...x.:..-.x..x:.........:.:x....:...x.:xx:.::..x......--..:xx:....::....:x-..:....:..x..x::.x.x............x.x.....::....x.::..x.:...:..x........:x....x...........x...........:...:.............:..:..............:........:..:.....:.....:..:...........:..x..x.....:..x........x...............x.x..:x...x:x.x.x:.x.:.--......:::.----x.:...x:..:..----.:x.:x.x.::x.:...:..-------------:::..x.x......xx......::..xx...x.x...-....::....:..-.x::...----....x.:..:.x:x...... 11M9D28M4I60M4I30M4D36M1D10M1D33M2I42M1I8M2D4M6I41M1D18M25I13M7I54M1I14M1I37M2D203M5D12M1D14M3I44M6D27M5D44M1I14M3D124M4D85M23I8M1I45M2D18M1D238M2D10M4I13M4I20M13I37M1D13M1I7M4D20M 1061/1435 73.9% 1536/94230402 0.0% 155/1435 10.8% 4072710 NA +12401 chr4 + 190214555 20531974 20531973 20532556 583 TTTTCTTCAGGCGTCTCAATAATAATGAATTTACCGTGTTGGAAGCCACAGGAATCTTTAAGAAACTTCCTCAATTACGTAAAATGTAAGTCACTTGTTAGCTATTTTTTTTATTTC--TGTAGCATT-TTTTGGGTGTTCATTTCAGTTAAGTTTCTTAGAAAATTAGAAAATACTAAAAATCCTGGGAAATTTCCCTATGATGATGACCTGTAACATGAATTTAGGGTAATCTCTGCAAGGGA---------------CTTTTCTGTGTG-TTCAGCAGTGTCAATCACA---TTTTCTGTAGCAGAGCCTAAGCATCTTACTT---TAACTCAGACAGCTGGTCTGTTATGTGGCCACAGCAGGAATCCAGCAATCTAAGCACATT--AAAATGGGTTCAGTAATGTTTTGTAACTTCCTTTACTATT--CCCCAAACCATGCTGTTATTTTTTTT--------TTCATGTCAACTATTGGACTTTTTTGCTTCATTAAACTTTCATTAGAAGATAG-----TCAAAATT-AATGATTGGTAAA-------------CTGGCTTGATAGCTCATCTGTGTTACTACATGTCCACAACTCATATTTTAAAATAAGTTCATAAGCTCAGCAGTTTCAG chr4 - 94230402 16461721 16461720 16462331 77768072 77768071 77768682 611 TTTCTTGTAGGCGACTCAATAACAATGAATTTTCAGTCCTGGAAGCTACTGGGATCTTTAAGAAGCTTCCTCAACTGCGAAAAATGTAAGTACCACTTCAATGATCTTGTCTATTTCGATATCGCATTAGTATTAGTGCTGTCTTTCTTCA----CCTTTGATAGTTAAAGTCTATTAAAGTTTC-AATATATTT-----TAATGAAGAAATCAAGAATGGGTTTATATCAGTCATTGAGGTAGATCAAAGCTAGCCGTCCATCTCTTTGGGACTAAGCAAT-CCAGTAACAGCTTCTCCTGGTGCACAGCTCCAGCAGCTCTGCTGCGTGGTCCTGCCAGCTGGTCTGTTACGCAGCCACAGCAGGGAACTTG-AGCATAAGC-CATTCAAAAGTGGTTCCAGTAACCTTTTGTAACTTCCTGTACTACTACTCCCTAACCAGGCAGTTTTGCCTCTTTCAGCACATTCAAGACATGCCTTTGA-TTCTGTGCTTCATTAAACTATCATTAGATGAGGGAAATATCAAAATTAAATGACTGAGAAAAAAAAAGAGAGAGAAGGTTTGATAGTCCATT--------------TTCACAGCTGACATTCTAAGAGTTGTTTGTAATCTTACCAATTGTAG ...::.x:.....x........:.........x.x..x:.......:..x..:...........:.........:.:..x...........xx.x:x.:.::x..:..x.:......--.:.x.....-x.x.x:...:.xx:..:xx.:.----:...x..x.:...:.:xx..:....:x.:.-::x.x....-----.:....x..xx.xx.:x...::....x:x:.:..x:..x::x:..---------------.x.:...x..x.-:.x....:.-:..:.x...---.:.:...xx...x...::x....x..:xx:.---.::::.x.x..............:.::...........:.x.:x.-.::x.....-....--...:...x.:......:x..............x.....:.--:...x.....x..x...x.x::.:..--------....x.x..xx:x..x..-..:.x..............x........x..x:.-----........-.....:..:x...-------------xx..:.......::...:--------------.:....:..x.:...:...:.xxx...::...x..:.x..:..x:.. 117M2I9M1I22M4D30M1D9M5D45M15I12M1I9M1D9M3I31M3I45M1D9M1D4M2I40M2I26M8I18M1D34M5I8M1I13M13I18M14D47M 380/555 68.5% 611/94230402 0.0% 84/555 15.1% 4070253 NA +9584 chr4 + 190214555 20533569 20533568 20533723 155 TAGAAACTTTAGCAACAATAAGATCACAGATATTGAGGAGGGAGCATTTGAAGGAGCATCTGGTGTAAATGAAATACTTCTTACGAGTAATCGTTTGGAAAATGTGCAGCATAAGATGTTCAAGGGATTGGAAAGCCTCAAAACTTTGTAAGTAT chr4 - 94230402 16464804 16464803 16464958 77765445 77765444 77765599 155 TAGAAACCTGAGCAATAACAAGATTACAGATATTGAAGAAGGTGCATTTGATGGAGCCTCTGGTGTCAATGAACTATTGCTCACTAGCAATCGTTTGGAAACTGTTAGAGACAAAATGTTCAAAGGACTGGAAAGTCTTAAAACACTGTAAGTAT .......:.x.....:..:.....:...........:..:..x........x.....x........x......x..:.x..:..x..:.............x...xx::x.:..:........:...:.......:..:.....x:......... 155M 124/155 80.0% 155/94230402 0.0% 0/155 0.0% 4068765 NA +8684 chr4 + 190214555 20539428 20539427 20539590 163 TTTTTCCCCTCAGGATGTTGAGAAGCAATCGAATAACCTGTGTGGGGAATGACAGTTTCATAGGACTCAGTTCTGTGCGTTTGCTTTCTTTGTATGATAATCAAATTACTACAGTTGCACCAGGGGCATTTGATACTCTCCATTCTTTATCTACTCTGTAAGT chr4 - 94230402 16466797 16466796 16466959 77763444 77763443 77763606 163 TTTATTTCCTCAGGATGCTGAGGAGTAACCGTGTGAGCTGTGTGGGGAACGACAGTTTCACAGGCCTGAGCTCTGTCCGTCTGCTCTCACTATATGACAACCAGATCACCACCGTGGCACCCGGCTCCTTCGATACCCTGCATTCACTCTCTACATTGTGAGT ...x.::..........:....:..:..:..x:.:.x............:..........:...x..x..:.....x...:....:..x:.:.....:..:..:..:..:..x..x.....x..xx.x..:.....:..x.....x:.x.....x:...:... 163M 121/163 74.2% 163/94230402 0.0% 0/163 0.0% 4072631 NA +41615 chr4 + 190214555 20540672 20540671 20542650 1979 AGGGGAATAAAGATAGAGAAAAAAGTTCATAGCTCAAGTCAGTGAAGAAATAATTTGAGAGAAGCATCCATCCATCAGGAAAGTACTTAATCCTC-TTTTTGCATAAAATGTGACATTTTACATCGAGTGGCTAATTTGCACATATTAAAGATGGCATGTTTATAAATAATGAGATTGTCAATAGGTTTATGCTGAAGTGGTGAGATGCCAGAAGTATTGAAATTTGTAGAAGTAAATTCATTTTTATAACTGGCATTTAATCAACTCAGCTGTCAGTTTAGATGGGAAACCTATTCTCTAGAGCAAATAAGAGATGGAAATCTTGAGATGACAAATTAATGAATTAGCTGTTGTCAGGTTAAACTCAATAATATAAGGTAATCAGCCTTCATCTTTATATTAAATTACTGCATTATCAGT---GCGAAGTTTGACAGCAAGTCAGATTTCTGACAAGTTTAAATTATTTCTAAATGAAATATCTATCAGGATCCACTGTATAAACCCCAAATTCTACCTT---ACCTTATTTTTTGCATGAAATCATGTGAAGAATTACCTTATGTAAAAGTGTTGTTACTGCTTAAGTTCCAAGCATAAATATTTTATCAAAAAAAAAATGCATCTCATATACTGCATGTGATTCTGAGTAAGAATGGGGACAGGGAATGCAAAGAAGAAGGAATCATTCCAGCGGAAATAGCGTGGAGAAGGGTAGCTGGGGTTTAGAGAAGGAAGAAGATGAAACCCCAGGCTAAACTGTGCATCGTTTGCCTGTGGCTCTTAGAAACCTCTTGGCCAATCCTTTTAACTGTAACTGCTACCTGGCTTGGTTGGGAGAGTGGCTGAGAAAGAAGAGAATTGTCACGGGAAATCCTAGATGTCAAAAACCATACTTCCTGAAAGAAATACCCATCCAGGATGTGGCCATTCAGGACTTCACTTGTGATGACGGTAAGAAA---TACTTATCAACTCTTTGATTGTCAGGCATTCACATGCCTGTTCTGATGCAGCTTTGCACAAATCTACAGCATAG-----TTCAGCTCAGCAAATAATGATCGTGTATCTTTTGCTTTGTCGTTTGGGTTTTGTTTTAGTGCCAGGACACTTACTTTCTTAG-------ACTTGCCTTCCACATTTGAGTCTACTTGATGTGCATTTCTGAATGTTTTAGATTTTCTAGTTTCCAACTTGTGGTTGGTCTTACTTATATAGCTTCATTTTAACTTTTCTTT----ATTACCCTAGGCATGTTTTTTAGTACCTACCATTTTCAAAGGAGAAAA------------GAAATTAACTTACAGAAGTTTTAGTAAATCTGACAAAAATACTAGTTGTCACTTTTTAATGCTCTTTCTATATCAT-CACATTT----GATTCTCAT--ATAGCCCTATCAGGTACATAGAACAAGTTCTATTATTATTGCCAATGAACAGAGAGCTAATTTGAGCTTTATAAATGAGGAACCTAAACTTTTAAGTTAATATATTCCCTTATGTCTCTTCATATCTGTTTCCGTGCCGTTTCTCTGTAATTCACTTTGCATTTACATATTG--TAATTAAA----AATATAATTTGTACAAATAACTATTTTCCATTGTATTGGTAATTGTAATTACAGTTTACAAATTGCAAGCCATTTTCCAGAATTCTTCCCTAGGCAGTCTG--AAAACA-----GTGCTATATAGA-----ACTTACGGTATCAATT---------AGTAAAT-ACTGAATGTCCCGCAAATAA----ATGATTATGTAGCTTAAGACTCTTGTGTTTGTTAAGTTAATTTAAAGGCATAAAATCCCTTCTAGCACCTTCAA---------GACCACAAATCTTGGTTTTCCTGTATTTCCTCTGCGATTTAGGAAATGATGACAATAGTTGCTCCCCACTTTCTCGCTGTCCTACTGAATGTACTTGCTTGGATACAGTCGTCCGATGTAGCAACAAGGGTTTGAAGGTCTTGCCGAAAGGTATTCCAAGAGATGTCACAGAGTTGTAAGTAGAGCTTGTCTTTCTTTT chr4 - 94230402 16466995 16466994 16468771 77761632 77761631 77763408 1777 AGGGAAGAGAAATTTGGGTAAGAAGTT------GCCAGTCAGTT------TAATGTGGGAAG------CATCATTCAGGAACTTACTTAAACCCCATTTTTACATAAAAAGTGACACTTTGCACTGAGTGACTAATTTGTGCATATTAAGGGTGGCATGTTTGTAAATAATGGAATTGTCGGTATGTTTTTGCTGAAGGTAAGAGATGCGA-AAGTACTAAGACTTCTAGAAGTAATTCCATTTTTATAACTGGCATGTAATCAACTTAGCTGTCACTTTAGATAGGGAACTTATTCTCTGGAGCAAATAAAAGATGGAAATCTTGAGATGACAAATTAATGGAATAGCTGTTGTCAGGTTAAAGCTAATAATGTAAAGTAATCAGCCTTCATCTTTATATGAAATTATTGTATAATCAGTACAGTGTGGCTTGACAACTAGTTAAGTCTTTGACAGTTTTAAATTATTTCTAAACGAG--CTCTATTAGGATTCACTATGTAGAGCCTAAATTACAGCTTTTAACTATGGTTTGTACATACTGGTGTTTGAAGAACTG---TATTTAA-------------GCTTAGGTTT-----------------TTGAAAATAGAATAC---------------------------TTAGAATGAGAAAAAGTTCTGTCACGA-------------------------------------------------------------GAGGTGAA-----------------------CTTTCATGTGGTTCTCAGAAACCTCTTGGCCAATCCTTTCAACTGCAACTGCCATCTTGCATGGCTTGGAGATTGGCTAAGGAAGAAACGCATTGTGACGGGAAACCCTCGCTGTCAGAAACCTTATTTCCTCAAAGAGATTCCTATCCAGGATGTGGCAATTCAGGATTTTACATGTGATGATGGTAAGAAAGTTTATATTTTAACCTTTACAACTTCA-GCTTTCGTATGAGTAGTTTCAT---GATTTCCATGAGAC-ACAACGTAACGTTCTTTAACTTGAGAAATA--------GTATTCTTTAAATCATTTCATGAGTTTCCTACT----------CATTTACTTTATCAGTTTAAAAACTTTTCACCCACTTTTTGA--TAATTAGCAAGCAT-----ATGGCTATAGTATATGTACTTTCAAAACTTT------TTTCGCTTATGT-TCTGTAATGCAATTATAATTTAGAGATAACACAAAGTAAATTGATTAAATGCTGTAG--TTCAAATGAGAATACTTTTGAATGTTGATGCTCACATCAAGCACTCCT------TCAGACTGCTTGATCAGTTATCATGATGTTTTGCTCAGTTTGTGACTTCCACAATTTCAGAATTCCCCTCAACATCTCTCTCACATGCAC--------TTCCAT--GTATTG--AATTATTAGTTAGTTAGTTT--------TCAA-----AACTGTAACTCTTCTTTAAAGGGACTCCATT-----TATTTTAAATTATTTGC------TTATTTTGAAAATCA----GCATACATATATTGCTTTATTATACTTCAATTTAAGTTGCATTA------TTTCTTTAATGTTTTGGTTTTTTT----------------TCCCAAACAAT-----AGCATTTTTATCTA-GTAATCTAGTAAAACAGCATTGTACTAAATAAAGTGTTACTTGAAATATAAATTCTTGGAACAATGAAATGACAGTATTTTCCATTCATAGCGATATCATTATGCAG-----AAATCTCATTTTTACTTATGGGAATTACACGTAGGACATTGTAGCTA--ATCCTCAAATTTTATTTGCATAGCAATCTTAGCAT--CTGTATGTTTTTAATGA-CCAGGAAATGATGACAATAGCTGCTCTCCGCTGTCCCGCTGTCCTGCAGAATGTACTTGTCTAGACACAGTTGTTCGCTGCAGCAACAAAGGCCTAAAAGCTTTGCCTAAAGGCATCCCAAAAGATGTAACTGAACTGTAAGTGGCGCACATTTTTCCCTT ....:.:x:..:x.x.:.x..:.....------x.x.......x------....x..:..::------....xx.......xx.......x..:.-.....:.......x......:...:..::.....:........::........:.:..........:.........::......::..x....x........xx:x.......x.-.....:.:.:.:..x.........x.:..................x.........:........x.......:..:...:........:..........:..............................:.x...................x::......:...:.......................x......:..:..x......---.:.x:.:......:.x...:.::.:.:.....:x.................:..:--x.....:.....:....:.:..:.x..:.....x:.x...---..:x.:x...x.:...:xx:x::.x.......:.:---...x...-------------.....:...:-----------------.::....x.:...:.---------------------------.x......:.:.x.:.xxx..:x.x..-------------------------------------------------------------:..:....-----------------------:..x.x.....:...:.......................:.....:......:.:..x..x...:.x.....x.....:..:.....:x.x.....x........:...x.x.....:.....x..:.....x.....:..x..:..............x........:..:..x........:.........---..:x.x.:...::..xx.x:x...-..x...::...xx.:x.:.x..---.x...x..::.:x.-...:.:..:-----..:.:..:::x.....--------....::...:xx.::.:x:x..:....:x.x:.----------..:.......x.:..-------....x:.x:....x...x::--..x..::::x....-----.xx.:.x...xx.x.x..x....x..x:.x.------.:.::.....:.-x..x:.x.x:..:.x.xx...----..x..x.x.:.:.x:..xx...:xxx..::x:--......x.....x.------------..x::.x..x.xx..x.x.::.------..x...x:xxxx.::....:...:xx.x.xx.....xx.:.:.:x.x.-....x..----:....:.x.--.:.x.:..x...x:.:..:--------...:..--x.....--...x.x:..xx..:..:...--------.x..-----...:xx....:..xxx.x..x:x.:...x..-----.x..:xx.x:.:...x.------..x:.:..x..x...----....x:.:......--.x....x.----...x...x...:.:x.------x..:.::.x...x.....xx..x.----------------.:x...:.x..-----..x...:..x:...-.:.:...:--......-----..:...x...:.-----....:x::...x....---------.xx....-..x.x..x.:..::xx...:----..x......:..-----:.x...::.x...::.x.xxx:.x...x.x.:.x:.x..:x:xx...--.:.:....---------.xx:.xx......:.:x.--......x.::.:x::..-::..................:.....:..:..x..:.........:.x...........::.:..:.....:..:..x..:........:..::.:..:.::.....x.....:..:....:......x..x..::.......:.x..x::.:....::.. 27M6D11M6D12M6D27M1I115M1D209M3I55M2D40M3I35M3D7M13D10M17D15M27D27M61D8M23D193M3I24M1D22M3D14M1D9M5I16M8D33M10D15M7I20M2D14M5D31M6D12M1D21M4I32M2D14M12I22M6D48M1I7M4I9M2I19M8D6M2D6M2D20M8D4M5D31M5D17M6D15M4D14M2I8M4I16M6D24M16D11M5D14M1D8M2I6M5I12M5I16M9I7M1I20M4I12M5D47M2D8M9I18M2D17M1D161M 1193/1691 70.5% 1777/94230402 0.0% 374/1691 22.1% 4073677 NA +6737 chr4 + 190214555 20546001 20546000 20546147 147 AAGAAGATAATATTG-------TTCCATTGTT----TTTAGGTATCTGGATGGAAACCAATTTACACTGGTTCCCAAGGAACTCTCCAACTACAAACATTTAACACTTATGTGAGTAACATATTGCACTTTTCTTTGACTTACTCTATTTCCAGAAAA chr4 - 94230402 16469744 16469743 16469892 77760511 77760510 77760659 149 AAAAAAATAATAATGCTATGTATTTTATTTTTCTATTTTAGATATTTGGATGGAAACCAGTTTACTCTTGTTCCTAAAGAGCTCTCCAACTACAAACATTTAACACTTATGTAAGTA---------GCTTTAAAACAACTTGCTCTACTCACATGAAA ..:..:......x..-------..::...x..----.....:...:.............:.....x..x.....:..:..:...............................:....---------:....xxxx::....:.....:.:x..x:... 15M7I10M4I81M9D32M 110/138 79.7% 149/94230402 0.0% 20/138 14.5% 4076257 NA +7492 chr4 + 190214555 20548474 20548473 20548583 110 TTTTTCTCTTTTAGAGACTTAAGTAACAACAGAATAAGCACGCTTTCTAATCAGAGCTTCAGCAACATGACCCAGCTCCTCACCTTGTGAGTGTGAAAGTGTGGTACTGA chr4 - 94230402 16472744 16472743 16472853 77757550 77757549 77757659 110 TTTATTTTTTATAGAGATTTAAGTAACAACAGAATCAGCACTCTTTCTAATCAGAGCTTCAGCAACATGACTCAGCTGCTCACCTTGTAAGTTTAAACATGTAACATTGA ...x.:.:..x......:.................x.....x.............................:.....x..........:...x.:..x:...:::.:... 110M 92/110 83.6% 110/94230402 0.0% 0/110 0.0% 4075730 NA +7163 chr4 + 190214555 20548485 20548484 20548583 99 TAGAGACTTAAGTAACAACAGAATAAGCACGCTTTCTAATCAGAGCTTCAGCAACATGACCCAGCTCCTCACCTTGTGAGTGTGAAAGTGTGGTACTGA chr4 - 94230402 16473491 16473490 16473589 77756814 77756813 77756912 99 TAGAGATTTAAGTAACAACAGAATCAGCACTCTTTCTAATCAGAGCTTCAGCAACATGACTCAGCTGCTCACCTTGTAAGTTTAAACATGTAACATTGA ......:.................x.....x.............................:.....x..........:...x.:..x:...:::.:... 99M 85/99 85.9% 99/94230402 0.0% 0/99 0.0% 4074994 NA +6468 chr4 + 190214555 20549041 20549040 20549136 96 ATATGTATGCTTTCAGAATTCTTAGTTACAACCGTCTGAGATGTATTCCTCCTCGCACCTTTGATGGATTAAAGTCTCTTCGATTACTGTAAGCAT chr4 - 94230402 16473771 16473770 16473866 77756537 77756536 77756632 96 ATGTGTATGTTTTCAGAATTCTTAGTTACAACCGCCTGAGGTGTATCCCTGCACGGACTTTTGATGGGTTGAAATCACTTAGGTTGCTGTAAGTAT ..:......:........................:.....:.....:...x.x..x..:........:..:..:..x...x.:..:.......:.. 96M 79/96 82.3% 96/94230402 0.0% 0/96 0.0% 4075270 NA +6468 chr4 + 190214555 20549041 20549040 20549136 96 ATATGTATGCTTTCAGAATTCTTAGTTACAACCGTCTGAGATGTATTCCTCCTCGCACCTTTGATGGATTAAAGTCTCTTCGATTACTGTAAGCAT chr4 - 94230402 16473035 16473034 16473130 77757273 77757272 77757368 96 ATGTGTATGTTTTCAGAATTCTTAGTTACAACCGCCTGAGGTGTATCCCTGCACGGACTTTTGATGGGTTGAAATCACTTAGGTTGCTGTAAGTAT ..:......:........................:.....:.....:...x.x..x..:........:..:..:..x...x.:..:.......:.. 96M 79/96 82.3% 96/94230402 0.0% 0/96 0.0% 4076006 NA +6344 chr4 + 190214555 20550729 20550728 20550927 199 ATTTAAAATGCTTATTATAAACTAAAGTCTCGGAATTTCTCTGGAGTCTATGAGTTCAGAAATATAGGAAGTTTAATTTTTCTTTTTCTTTCTTTTAGTTCTCTACATGGAAATGACATTTCTGTTGTGCCTGAAGGTGCTTTCAATGATCTTTCTGCATTATCACATCTGTGAGTACCTAGTTTATGAATATAGGTTT chr4 - 94230402 16475090 16475089 16475278 77755125 77755124 77755313 189 ATTTAAACTGTTTACAAAAGTTGAAATTTTTAAAATGAATCTGCAGAGT-----TTTATCCATATA-----TCTTATGTTATTTATCTTCTTTCTAAGGTCTTTACATGGCAACGATATTTCTGTGGTTCCTGAAGGAGCCTTTAATGATCTTTCAGCGTTATCACACCTGTGAGTATTCAGATGATAATCATGTCTTT .......x..:...:x.x.:x:x...x.:.:::...xxx....x..xx.-----..:.xxx.....-----.:.x..x..x:..x.::.:.:.:.x..x...:.......x..:..:........x..x........x..:..:...........x..:........:.........:::..x.x..:.x:..:xx... 49M5D12M5D128M 129/189 68.3% 189/94230402 0.0% 10/189 5.3% 4075639 NA +6466 chr4 + 190214555 20550729 20550728 20550927 199 ATTTAAAATGCTTATTATAAACTAAAGTCTCGGAATTTCTCTGGAGTCTATGAGTTCAGAAATATAGGAAGTTTAATTTTTCTTTTTCTTTCTTTTAGTTCTCTACATGGAAATGACATTTCTGTTGTGCCTGAAGGTGCTTTCAATGATCTTTCTGCATTATCACATCTGTGAGTACCTAGTTTATGAATATAGGTTT chr4 - 94230402 16476513 16476512 16476701 77753702 77753701 77753890 189 ATTTAAACTGTTTACAAAAGTTGAAATTTTTAAAATGAATCTGCAGAGT-----TTTATCCATATA-----TCTTATGTTATTTATCTTCTTTCTAAGGTCTTTACATGGCAATGATATTTCTGTGGTTCCTGAAGGAGCCTTTAATGATCTTTCAGCGTTATCACACCTGTGAGTATTCAGATGATAATCATGTCTTT .......x..:...:x.x.:x:x...x.:.:::...xxx....x..xx.-----..:.xxx.....-----.:.x..x..x:..x.::.:.:.:.x..x...:.......x.....:........x..x........x..:..:...........x..:........:.........:::..x.x..:.x:..:xx... 49M5D12M5D128M 130/189 68.8% 189/94230402 0.0% 10/189 5.3% 4074216 NA +13161 chr4 + 190214555 20553796 20553795 20553998 203 TTTTTCCAGAGCAATTGGAGCCAACCCTCTTTACTGTGATTGTAACATGCAGTGGTTATCCGACTGGGTGAAGTCGGAATATAAGGAGCCTGGAATTGCTCGTTGTGCTGGTCCTGGAGAAATGGCAGATAAACTTTTACTCACAACTCCCTCCAAAAAATTTACCTGTCAAGGTATGGTTTTTAA-----TCATTTGTATTTCTTTT chr4 - 94230402 16479614 16479613 16479821 77750582 77750581 77750789 208 TTTTCACAGGGCTATTGGAGCAAATCCTCTTTATTGTGATTGTAACATGCAATGGCTGTCTGACTGGGTAAAATCAGAATACAAAGAACCTGGTATTGCACGATGTGCTGGCCCTGGAGAAATGGCAGATAAACTTCTACTTACAACTCCATCTAAAAAATTTACTTGCCAAGGTACTGTTATTTATGTGTTTTTTTGTTTTTTTTTT ....:x...:..x........x..:........:.................:...:.:..:........:..:..:.....:..:..:.....x.....x..x........:........................:....:........x..:...........:..:.......:x...x..x.-----.:x.....x...:.... 186M5I17M 168/203 82.8% 208/94230402 0.0% 5/203 2.5% 4074182 NA +4779 chr4 + 190214555 20554245 20554244 20554475 231 CATAGCCTCTAACAAGTCAAATGTTTTGCTTTTGCCCTGTCTGAACAT--GTGCCCTGCTCCTAGGGCTGCCAGGGCCCTGTGGCTTCCTCATACCAGGTAAGG--------------AGAAACAGGCCCTCCCCAGTGTTCAGCCCAAACCTTCTGACTCGCCTTATGTGC------TGCAGCCTTCCTGTGTTGATGTTCTTGTTTCTTGCTTGTTTGTATCCCTTTCTTTTCCCTTTGTTTGATGTATTT chr4 - 94230402 16481861 16481860 16482087 77748316 77748315 77748542 227 CACGGCCTCTAACAGAT------TCTCACTCTTTTACTCTTTTACCATTCATGCCCTGCTTCTAGAGATTCCAGGGCCTTGTGGTTTTCTGATACCAGGTAAGGTTGCAAGTAATACCTGGAATGGGTGATACGT----TTAAGAACGGACCTTCTGACCTTCCTTTTGTGTACCTCAAACAGACTTCT----------TTCCTACAACATGCATGCTTA---CTGTTTGTTTTCCCT---TTTGATGAATTT ..::..........::.------.:.::..:..x:x..x.:.x.x...--:.........:....:.x.x........:.....:..:..x.............--------------x.:..::..:xx.x.x:----..x..xx.::..........::x....x....:------x:...x....:----------...:.::xx.x...x..:..:---.:x...x........---.......x.... 17M6D25M2I54M14I17M4D33M6I11M10D21M3D15M3D12M 144/205 70.2% 227/94230402 0.0% 48/205 23.4% 4072384 NA +10342 chr4 + 190214555 20567241 20567240 20567391 151 TATTTTTGAAT----------TAATTTTCAGGTCCTGTGGATGTCAATATTCTAGCTAAGTGTAACCCCTGCCTATCAAATCCGTGTAAAAATGATGGCACATGTAATAGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGTTTCAAGGTAAG chr4 - 94230402 16484897 16484896 16485057 77745346 77745345 77745506 161 TGTTTCTGAATATCCTATTTGTATTTTTAAGGGCCCGTGGATGTCAATATTCTTGCTAAGTGTAACCCCTGCTTATCAAATCCATGTAAAAATGATGGAACCTGCAATAATGATCCAGTTGACTTCTATAGATGTACTTGCCCATATGGTTTCAAGTTAAG .:...:.....----------..x....x...x..:.................x..................:..........:..............x..x..:....:...............:..:x....:..:..:...............x.... 11M10I140M 131/151 86.8% 161/94230402 0.0% 10/151 6.6% 4082344 NA +34567 chr4 + 190214555 20567241 20567240 20569021 1781 TATTTTTGAAT----------TAATTTTCAGGTCCTGTGGATGTCAATATTCTAGCTAAGTGTAACCCCTGCCTATCAAATCCGTGTAAAAATGATGGCACATGTAATAGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGTTTCAAGGTAAGTAAAAGCACTTTAAGAGTCACAGTTTG-AGAGCAT-AACTTTTC--------------TTGGTGTGCCTTTATTATTCTACTGTGCTTTCTGTATGTGCCAAGAACTACTTCACTCGACTATACTTGCCCCTTCTTCTCCAGGGGCAGGACTGTGATGTCCCAATTCATGCCTGCATCAGTAACCCATGTAAACATGGAGGAACTTGCCACTTAAAGGAAGGAGAAGAAGATGGATTCTGGTAGGTCATTAGTCTATGACCATCTGTGTCTGAAGTATTGGAGCAAAGATAACTAAGCCAACATACATTTTCCTTTTCAAATCAAAGGACAGTATTTTTCAAAGAATTTGAGAGAAATGGCAATATGTATTGGTCCCTCTCGTAGATA-TTGCAATATAAAAAATAAATGGAGACACTACAGCA-TTCTCAG-------------CACAGGATGCTACAAAACCAAAACTAAT-TTACAAACATACACATGTGCACATTATGGTTAATCAGGTCAGATTAGGGCAAGACAAAGTATTAATATTGGCTCCATTATACTAATTAATAGCCAACTAGTCCCCTACTGCTAG----TCATATATTCATCTGTTGTTTTGCTTATTGCTTTAACAGACAGTGTGTAA-TGACAAGATATAGGTCCCACTGAAACAGAAAATTAACGATTTATTTCCAAGACACAATGTAAGTAGACAGACTTGCTGTGAACGATTTTAATCTGGAGTTATTTAATCATATGGTACAATTACTTCAGATGTACTTCATGAATTATGAACTGGAGCTCTTTA------TTAAATGACACTAATAATGTCACATAAGAATGCTAATATACTACTAAAACTTGTTAGAATTTCACTTTTTAGAAGAAATAGACTTCACTG--CTGCATTCTATTATGAAGTTCTCTCT--TATTCATCTAGACTTTACTCAAAAATTATTCGATACATACTCAAGATAGTTTTATGCCAGAGGAAGGATTGTATTTAAGACAAAGAGAACA----TTCACATTTTGT------AATTGCAAGGAAGACAAAATTTTGTTTTCGGATT-------------TTTTTTTTCAAAACATCAAGGACATT---------ATAAGTATGTTAGT---AGATATTGCAATTTTAAAGAT--CAGAACCAGTTCCTCTTCATTTATGAGCAAAGAAGCCTG----------------AATTATTTTATTAGAGCACA-----ACTCAAGATTAAGAT------------------ATCTAGG----GCTGTGGAATAAAACTGCTTGTGTTTTA----GACCTGCAAATACAG-----------TGGGTTT------------GTTGACTTTTAAGACCATGGAA------------------------CCATTTGCCTTCTT-----------GCAACCGGCATAAA------TTTTATTTT----------------------------TTGAAGGGTTTC-TGCTTT-----GGTG----GATATTAC--------CTTAAATTGATGTTTACAACATGTCAGTTAAAAGCATTTTAAAAAATCAATTTCTGGTAGTTAAAAGCTCTATGG-------TTGATGAGTGTAATT----------ATGCTTTTTTCAA-----------TATTTAG-----------ACCACATGACTT---TAAAATGC--AACAAAAAGATGTTTTTTGCCT--TTTCTCCTCTGGCATT-CAGGTGTATTTGTGCTGATGGATTTGAAGGAGAAAATTGTGAAGTCAACGTTGATGATTGTGAAGATAATGACTGTGAAAATAATTCTACATGTGTCGATGGCATTAATAACTACACATGCCTTTGCCCACCTGAGTATACAGGTACAAATAATAGGAAA chr4 - 94230402 16487142 16487141 16489083 77741320 77741319 77743261 1942 TGTTTCTGAATATCCTATTTGTATTTTTAAGGGCCCGTGGATGTCAATATTCTTGCTAAGTGTAACCCCTGCTTATCAAATCCATGTAAAAATGATGGAACCTGCAATAATGATCCAGTTGACTTCTATAGATGTACTTGCCCATATGGTTTCAAGGTAGGTACTGGATGAAAAGGAAGAAAAATTAGTAAAGTATTAGCTTCTCCCTTTTAACAAGAATTTGTTTTAATTGACTCCTTTCCATTACTGTCTGTAT----------TTTCTTC-TTAAATAATGCCTGTTCCCTGC---ATAGGGTCAAGACTGTGATATTCCCATTCATGCCTGCATTAGTAACCCTTGCAACCATGGTGGAACTTGTCATTTGAAAGAAGGAGAAAAAGATGGTTTCTGGTATGTTGTTATTTT-----------TAACTCTAATAACAGAATGAAAA---------------ACTGTTGACTTTTATATTTA-----TACTGGTTCTTAA-----------------------TCTTTGGGTTCTCTTTGTTGATAATTGCACCACAAAAGCAGGTTTTCAGTGCTTCTGAAGTTTTCAGACATGTCACTGTCCATGGAAAGCTTCTAAAGCC---CCAATGTTGAGAACAACAATAAATG---GTTGTGATTAGTACAGGCTTTTCAGGTCAAGACAACATA---ATATTGACTCCATTATGCTAATTAATAGCTGGCTCGGTCCCTGCTGAAAAAATCTCACA-ATTCATCTGTTGTCGTGTGTATTACTATAACAGACAGCATGTAAATGATAAAATTTAAATCCCAGTGAAAGAGAAAATTAATGATTCATTTGAAACTCACTATGCCAGCAGATAAACATGCTGTGAGCATTTTTAATCTTGAGTTATTTAATCACACAGTACAATTACTCCAGATGTACTTCATGAATTATGAAATAAAGTTCTTTAGCATTCTTCTGTGAAATTATTA--GTCATTTAA------TAATCTACACGTCGAGCTTGTTAGAAATGACACTTCAAAAAGAAACAA--TTCATTATCCTGCAATTCATTAAGACATTATTTTTATTTTTAATCCATGTTCTGCCCAAAGATTA-------AATACTT--------------------------TTCTATTTAAAATTAAGTATATAGATCTTAATATTATGTTTCCAGAATTTAAAGT--GACATAGTCCTGTCTCAGTATTCAACCTTTTCCACTTATTTGTTTAAACACTACATACTTTGAAAATCAAATCAATCTTTTAATCATAGTTACAGTAATTATGTATGCTGCAAATTATATGCATGGTCATATTTGAG---AGATATTTACTACCTTTTTTGATGTATTTATTTTGTATAAACATATGTAAAAGCAAAATAAAAATCACCCCTTTGAAAAGTTTACGTAGGCTTTGTTTTCAGATATAAATACGTGTATTGTATATGGAACTTTAAACACAGATGTATAATGATGCCTTTAACTAAACGATAGTTGAGTAGTAGTACCACAAAATAATCTCTGATTCCACAGTTTTTTCCATTTGCTTGTTTTTATGAACAAGACAAACAACAAAAAAAGCAGGATTATTTTCCTTAAGAAATACAATCTCATGTAATAATAGAAAGGTAGCATGCATTTCAGAAGTGACCAGTTATTTCAGAAACTCCTTAAACTAAAAGGCACAA------ATTTAGAAGCCTTTTTG----TCTGTAACTTAAAGTGATAAAATATTTGGGGAATATTTAGTGCATGTATTTTATATCATCCATATTCTCTTCAAGGTAGTGATTATAATTAGCGTCCCTATTAATTACAGAACTTCTCTGACCTCCCCAGCTAAAATAT-TTGTGTGCTTGGTTTTATTTTTGGTTTTACAGGTGCACTTGTGCAGATGGATTTGAAGGAGAAAATTGTGAAATAAATGTTGATGACTGTGAAGACAATGACTGTGAAAATAACTCTACTTGTGTGGATGGAATTAATAATTATACTTGCCTTTGTCCACCTGAATATACAGGTAGGAGTATAAGAGAA .:...:.....----------..x....x...x..:.................x..................:..........:..............x..x..:....:...............:..:x....:..:..:..................:...xx:.xxxxxx.:..:xx.x.:..x.-.:..:..-.:...:..--------------..x..x.xxx..x.:.x:.:.x.xx.:..x.......----------:.x....-:.x:.:x..:.:..::..:.x:---x:....x..:.........:.:..x..............:........x..:..x.....x........:..:..:..:.........:.......x........x..::...x.:.-----------.:x..xx.:..x::..:::..:.---------------..xx..xx.....xx.x.:.-----:.x.:x..:.:..-----------------------.x.x.x...:.:::.:..x....-.....x:.:....:xx::x.xxx::::..x.x.x.-..:....-------------..::.:.x...x.x...x.x---.:...-..:x:....xxx.:.x:..---:..:..:...:.xx:.x.xxx.:...x........x:..---......:.........:............:::..x.x:....:...xx.:----...:.-.............:x..:x....:..x..........::.....-...:..:..x..::.....x.....x..........:....:....xx..xx...x...:x..:...:.:..x........:.:x.........x..............:.::...........:........................x.::..:......------..xx:...x.:..x..--....:x...------....x...xxx.x:.:..........x.xxxx:..:x.:......:.:--....:.:--.....x.::....x..x:..x.:.:.--.x..x...:.x::.:.:.:....:....-------x.....:--------------------------..x.......:.:x...x:x.:.----..x.:...x...------....xx...x--....x.:.::...:.:x.x...-------------..x...x.:x.....::.x:x..x..---------..x.:.x.x...:.---..x..:x.:....x.:x.x::--..:.x:xx:.x.x.xx....x.x....---...x:::.:----------------.x.......:.xx:.:..:.-----.xx...:..x..:..------------------.:x....----.:.x.x::...x..x.:.x...:..x..----..x..x:...:....-----------..xx...------------.....x.xx..:x....:::..------------------------........:.x:..-----------:...x.::..x...------xx.......----------------------------.x...:...xx.-...x..-----:...----.x....x.--------......:.:.x:xx:....------.x...:....x....x:----..x:.xx..x:x...x.x..:x.x.x...-------..::..x:....x..----------..::.:.:.....-----------..x....-----------.::...x:....---.:.xx.x.--.:.x....x..-..x.x...:.--...:x::.:...:x..-......:.:......x...........................:.x..:........:........:.................:.....x.....x.....x........:..:..x........:........:..........x:.:..xx..::.. 11M10I167M1I7M1I8M14I37M10D7M1D22M3D117M11D23M15D20M5D13M23D23M1I35M1I7M13I20M3D5M1I19M3D39M3D50M4I5M1D44M1I162M6I16M2D9M6D48M2D7M2I26M2I28M7D7M26D23M4I12M6I10M2D22M13I26M9I14M3I21M2I27M3D9M16I20M5I15M18I7M4I28M4I15M11I7M12I22M24I14M11I14M6I9M28I12M1I6M5I4M4I8M8I19M6D17M4D29M7I15M10I13M11I7M11I12M3I8M2I11M1D10M2I16M1I160M 1161/1644 70.6% 1942/94230402 0.0% 435/1644 26.5% 4080099 NA +12985 chr4 + 190214555 20573036 20573035 20573331 296 GATGGCATTTACCTTTTGCCTCATTTTCTCCATGTTTGTGCGTGTGGCCCGGCTGTAGGTAAGAAATCCAAGCCTTGCTTCAGCTT-GCTCGCCCACCCCTGCTTCTCTGTTGTGAACGCTGCGCATTGGCTTCCTGTGCTCTGCTGTTGTATTGCAATGTAAAAAGTCTTTTGTCTCTTCTGTCTTTGTCGCTGCCAGCTGCTAATCTGAATGAGGTGGAAAAAGGTTAGTTGCCTTTTAAGTCTATTATGATTTTCATTTTAGTCTCCCTCTTTCTTGTAAAGTTACATAGATTT chr4 - 94230402 16492845 16492844 16493107 77737296 77737295 77737558 263 GGTGGCATGTACTTCTTATCT-----------TTTCTGTTTGTTTTGCTCTGCTGTAGGTGAGA---CTGAAGCTTGCTTCATTTTTGCT-----ATATCAACATCTCTGCTGCTATAGCTGTGCATTAGCTTAATGTGCTATGCTGTTGTATTACAATGTAAAAAGTCTCTTGTCTCTTCTGTCTTTGTCACTGCAAGCTGCTAATCTGAATGAAGTGGAAAAAGGTCAGTTGTCTTTTAAGCCTATTTTCACTTTC--------------CTTTCCT-TAAAGGTGCATGGATTT .:......x...:.:..::..-----------.x.:...x:..x.x..:.x.........:...---.::.:x.........x:..-...-----.:x:.x:.x......:..:x.xx....:.....:....xx......x............:...............:....................:....x..................:............:.....:........:.....x.x.:....--------------.....:.-.....x.:...:..... 21M11D32M3D19M1I3M5D163M14D7M1D17M 210/262 80.2% 263/94230402 0.0% 35/262 13.4% 4080191 NA +7738 chr4 + 190214555 20589609 20589608 20589748 140 TTTTCTATGAGCTAACACTGTTTGCCCTGTTGCAGGTGAGTTGTGTGAGGAGAAGCTGGACTTCTGTGCCCAGGACCTGAACCCCTGCCAGCACGATTCAAAGTGCATCCTAACTCCAAAGGGATTCAAGTAAGTCAAAA chr4 - 94230402 16501723 16501722 16501862 77728541 77728540 77728680 140 TTTTCACTGAGTTGAGAACATGTATTACTTTTCAGGTGAGCTCTGTGAGGAGAAACTAGATTTCTGTGCTCAAAACCTGAACCCTTGCCAGCACGACTCAAAGTGTATCTTGACTCCCAAAGGTTACAAGTAAGTTTAAA .....xx....:.:.x.x::.x.:::x:x..x........:.x...........:..:..:........:..::..........:...........:........:...:.:.....x..:..x.x.........:x... 140M 105/140 75.0% 140/94230402 0.0% 0/140 0.0% 4087886 NA +3496 chr4 + 190214555 20593975 20593974 20594028 54 TATATACACATGTACATACATATACACACACATACATATGTATGTGTGTATATA chr4 - 94230402 38535896 38535895 38535949 55694454 55694453 55694507 54 TATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ..........:......:x:x.......:...:....:.......:..:...:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -17941921 -76288481 +3383 chr4 + 190214555 20594124 20594123 20594227 104 TGCATATATATACATATATACACACATACATATGTATGTGTGTATATATGTAT--GTACATGTGTGTATATACATATGTATGTATGTGTGTATATATGTATATGTA chr4 - 94230402 73121108 73121107 73121213 21109190 21109189 21109295 106 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .......x:.....:.........x.x:...:x...::.::.....x:.::.:--...:.....x...:...:.x..::::x:.::x:x::.:.:.......x.:. 53M2I51M 65/104 62.5% 106/94230402 0.0% 2/104 1.9% -52526984 -41703418 +3050 chr4 + 190214555 20594160 20594159 20594230 71 TGTGTGTATATATGTATGTACATGTGTGTATATACATATGTATGTATGTGTGTATATATGTATATGTATGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::...:..::..:..:::...::x:.:..:...:x.x......:......x.::..:..x......:... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -51035975 -43194427 +3271 chr4 + 190214555 20594164 20594163 20594259 96 TGTATATATGTATGTACATGTGTGTA---TAT----ACATATGTATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATA chr4 - 94230402 51294098 51294097 51294200 42936203 42936202 42936305 103 TGCAAGCATGAATTTAAAAGTGTTTAGAGTATTTCAGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATA ..:.x::...x..x..x.x....x..---...----:......::.:.x......:.:.:x..:...........x:.:...........::.:x:.x.x... 26M3I3M4I67M 67/96 69.8% 103/94230402 0.0% 7/96 7.3% -30699934 -63530468 +3192 chr4 + 190214555 20594201 20594200 20594267 67 ATGTATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATA chr4 - 94230402 8395788 8395787 8395854 85834549 85834548 85834615 67 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACA ....:...:...:.::..:x.:......x.....:.....::x:.:..xx...:...:....:..:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 12198413 NA +3053 chr4 + 190214555 20594205 20594204 20594272 68 ATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTAT chr4 - 94230402 54293160 54293159 54293227 39937176 39937175 39937243 68 ATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATAT ..x.:.............:......xxx:.:....x.xxx:..:...:x:..:.....:.....:... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -33698955 -60531447 +3074 chr4 + 190214555 20594205 20594204 20594275 71 ATGTGTGTATATATGTATATGTATGTACATGTGTATATACATATACATATACATACACGCATATGTATGTG chr4 - 94230402 89016082 89016081 89016152 5214251 5214250 5214321 71 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTG .....:::.:..x..:..::::.:::..:.x..:::.:...:..:..x..:........:.x....:.... 71M 45/71 63.4% 71/94230402 0.0% 0/71 0.0% -68421877 -25808525 +3118 chr4 + 190214555 20594237 20594236 20594303 67 GTATATACATATACATATACATACACGCATATGTATGTGTGTATGTATATGTGTGTATATATATATA chr4 - 94230402 51294134 51294133 51294200 42936203 42936202 42936269 67 GCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATA .:....:.:...x::.:.:..:..x:............:x..........:::..:..x:.x.x... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -30699897 -63530505 +17466 chr4 + 190214555 20595666 20595665 20596697 1032 GTTTGAAACCATTACCTGCTTGTTCCAACAGATGTGACTGCACACCAGGGTACGTAGGTGAACACTGCGACATCGATTTTGACGACTGCCAAGACAACAAGTGTAAAAACGGAGCCCACTGCACAGATGCAGTGAACGGCTATACGTGCATATGCCCCGAAGGTTACAGGTAA-----------AAGCAGAA-----ATGAATAAGACCTAGT-------------GTTCAATAAGACCTAGCAC-----------AACAGGGTGACTATAGTCAG---TAATAGTGTAATCGTACATTTTAAA--------ATAACTAA----------AAGAGTATAACTGGATTGTTTGTAACACAAGGATAAATACTTGAGGGGATGGATACCCCATTTAACATGATGT------GATTATTATGCATTACATGCCTGTATCAAAATACCTCATTTACCCCATAAATATATACACTTACTAGGTACCCACAAAAATTAAAATAAAAAAATTTTAAGACAAA--------AAACGTAGAACTTACAGAA-GCAAAGAGTAGAATGAGGGTTACCAA-----AGAGG-----AGGACAGAG--GGATGGTGTTTGGGGAGATGTTGGTCAAAGGGT--ACAAAATGTCATTTAGACAGGATGAGTAAGTTTGGAATATC-------TGTTGTACAGCACAG------TGATGATT--TTGTTTAATAGTTAAGAATACTTGAAAACTGGAAAAAC-----------AAGGAAGTGCACATATATAAT--------------------------ATACAGTTATGTTATACAGCTCTCAATTCAGATTGGCAATTAAGTAAAATCGTATTA-------ACTAATTTTTTTTTCTCCTTATTCTTCAGTGGCTTGTTCTGTGAGTTTTCTCCACCCATGGTCCTCCCTCGTACCAGCCCCTGTGATAATTTTGATTGTCAGAATGGAGCTCAGTGTATCGTCAGAATAAATGAGCCAATATGTCAGTGTTTGCCTGGCTATCAGGGAGAAAAGTGTGAAAAATTGGTTAGTGTGAATTTTATAAACAAAGAGTCTTATCTTCAGATTCCTTCAGCCAAGGTTCGGCCTCAGACGAACATAACACTTCAGGTAAGAGATCTCTCTCTATGGAGAGATGATCGGATCTTAAAA chr4 - 94230402 16503677 16503676 16504764 77725639 77725638 77726726 1088 GTGTGTTATCCTTGCTTTTCTATTTCA-CAGGTGTGATTGCACACCTGGATATGTAGGTGAACACTGCGATATTGACTTCGATGACTGCCAGGACAATAAATGTAAAAACGGAGCACAGTGTACGGATGCAGTTAACGGGTATACTTGTATTTGCCCAGAGGGATACAGGTGAGGAAGATTTGAAAACAGTACaagcatgtttaaggccaggttggatggggcactgggcaatctgctatagtacttgatcttggagaagggaaggctctagggagacctaactgtggccttctggtacttgaagggagcatataaacaagatggggatcaactgtttacatgggttgatagtga---gaggacaa------gggggaatggtt-------ttaaattgagataagggagattattat-------------------------ctccctccctccctaa-tatat-tagatattagg-------------------aggaagttttttactcaaatgttggtgacacattgga---acaggctgcccagag-aggttgtggatgtcccatctctggaggcattcaaggcaaggttggatgtggctctgggcagt-ctggtctagtggttggcaaccctgcacatagccaggg-ggttgaaactagatgatcattgtggtccttttcaacccaggccattctatgattgattctatgATTGTAGgatctactgg----ctggcaaccctgcctgtggtaggggggttggaattttatgatccttgaggtccgttctaacccaagccattctgtggttctgtgTATGTCTTTCTTGTG---------TCAGTCACATTGTTTTTTGTAAATACTGATTTTTCTATTT-----GTATTTAGTGGCTTGTTTTGTGAGTTTTCGCCACCAATGGTTTTACCTCGCACCAGCCCTTGTGATAATTATGAATGCCAAAATGGAGCCCAGTGTATTGTAAAGGAGAGTGAACCAATCTGCCAGTGTTTATCAGGCTACCAGGGTGAGAAATGTGAAAAGCTGATCAGTATAAACTTTGTCAACAAAGAATCCTATCTACAAATCCCTTCAGCTAAGATACACTCCCAAACCAATATCACTCTTCAGGTAAGA---TTGCTTGTATGGA-AGAT--TCTGATCTGGAAA ..x..xx.:.x..:.:.x::.:..:..-...:.....:........x..:..:.................:..:..:..:..:........:.....:..:..............x..x..:..:........x.....x.....x..:..x.....x..:..x.......:.-----------..:...x.-----...xx....:..x:..-------------.xx....xx.x:x...:..-----------:.x:..:x.:..x...xx..---...:x...xxx.:x.:xxx:..:..--------....x:..----------..xx..x..xx...:...x.x..:.---:....:..------.:...:....x.-------....xx...x:.------.........-------------------------...x:.:x.:..x...-.....-:.xx..:....-------------------.::..:x....x.xx....--------.x..:.x.:.---....:x-..xx....-..:x..x..:.xx..x.-----:....-----.:.:..::.--.....xx.:.:x...x::.-:.....x.:x...--:...xx:xx..:x...x....:-.:x.:.:x:.:..xx...-------.x:.x.x..:.x...------:x......--..x.x.:..x..x:::xx....x.----....x..xx.-----------::..::x..x.xx.x...:..--------------------------..x.x..x:.x:.:.::.xx...:xx..xx.---------.x...x.x..:..x..x-------...:......:.x.:.-----x.x..:...........:...........x.....x.....::.x.....:........:..........x...x..:..:........:........:..x.:::x:.:...:.....x..:........::.x.....:.....x..:..:........::..:.:...:.:..:...:.x........:..:.....x..:..:........:...:.x.:x:.:..:..x..:..x..x............---:.x::.x......-....--..x.....x:... 27M1D145M11I8M5I16M13I19M11I20M3I25M8I8M10I25M3D8M6D12M7D12M6I9M25D16M1D5M1D11M19D19M8I10M3D6M1I8M1D17M5I5M5I9M2I19M1D13M2I22M1D18M7I15M6I8M2I24M4D10M11I21M26I31M9D17M7I16M5D255M3D13M1D4M2D13M 650/939 69.2% 1088/94230402 0.0% 242/939 25.8% 4091989 NA +9111 chr4 + 190214555 20598203 20598202 20598401 199 TTCTGATCAAATACGTTTGGTTGCGTACACATCCTAGTAATGCCAGGGTTACTTTCTACTAGATTGCCACAGATGAAGACAGCGGAATCCTCCTGTATAAGGGTGACAAAGACCATATCGCGGTAGAACTCTATCGGGGGCGTGTTCGTGCCAGCTATGACACCGGCTCTCATCCAGCTTCTGCCATTTACAGGTGAAG chr4 - 94230402 16505007 16505006 16505194 77725209 77725208 77725396 188 TTTTGATTAAATATTTTTAATT-------CTTTCTAATTGTTTC----TTTCTTTTAATTAGATTGCCACAGACGAAGACAGTGGGATCCTGCTCTACAAAGGCGATAAGGATCATATAGCAGTAGAGCTGTACCGTGGTAGAGTGAGGGTCAGTTATGACACAGGATCTTATCCAGCCTCTGCTATTTACAGGTGAAG ..:....:.....:x...::..-------.x.:...:.x:.x:.----..x....:x.:..............:........:..:.....x..x..:..:..:..:..:..:.....x..:.....:..x..:..x..xx.x..xx.x.:...:........x..x...:.......:.....:.............. 22M7D15M4D151M 141/188 75.0% 188/94230402 0.0% 11/188 5.9% 4093196 NA +11390 chr4 + 190214555 20609994 20609993 20610172 179 ATTTTTTTTTCCGTTGTAGTGTGGAGACAATCAATGATGGAAACTTCCACATTGTGGAACTACTTGCCTTGGATCAGAGTCTCTCTTTGTCCGTGGATGGTGGGAACCCCAAAATCATCACTAACTTGTCAAAGCAGTCCACTCTGAATTTTGACTCTCCACTCTATGTAGGAGGTAAG chr4 - 94230402 16510900 16510899 16511078 77719325 77719324 77719503 179 ATTAATGTTTATTTTGCAGTGTGGAAACTATTAATGATGGCAATTTCCACATTGTGGAGCTGCTTGCCATGGATCAGATTCTGTCTTTGTCTATTGATGGAGGAAGCCCCAAGATAATTACCAATTTGTCCAAGCAGTCCACTTTGAATTTTGATTCTCCACTGTATGTCGGAGGTAAG ...xx.x...x:x...:........:..x..:........x..:..............:..:......x.........x...x........::.x.....x..:.:......:..x..:..:..:.....x............:..........:........x.....x......... 179M 146/179 81.6% 179/94230402 0.0% 0/179 0.0% 4099094 NA +3118 chr4 + 190214555 20612292 20612291 20612350 59 ACATTCCCCCGCCCCCCGCCAAAAAAAAAAAAGAGGAAAAAAAGTTTTAAATTTCAAAA chr4 - 94230402 22571653 22571652 22571711 71658692 71658691 71658750 59 ATATTCCCCCCCCCCCCCCCAAAAAAAAGAAAAAAAAAAAAAGATAGTTACTTTTGAAA .:........x......x..........:...:.::......::.xx.x.x...::... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -1959361 -92271041 +17947 chr4 + 190214555 20616902 20616901 20617211 310 CTCCCCAGGCATGCCAGGGAAGAGTAACGTGGCATCTCTGCGCCAGGCCCCTGGGCAGAACGGAACCAGCTTCCACGGCTGCATCCGGAACCTTTACATCAACAGTGAGCTGCAGGACTTCCAGAAGGTGCCGATGCAAACAGGCATTTTGCCTGGCTGTGAGCCATGCCACAAGAAGGTGTGTGCCCATGGCACATGCCAGCCCAGCAGCCAGGCAGGCTTCACCTGCGAGTGCCAGGAAGGATGGATGGGGCCCCTCTGTGACCAACGGACCAATGACCCTTGCCTTGGAAATAAGTAAGTTCCTGCT chr4 - 94230402 16514257 16514256 16514566 77715837 77715836 77716146 310 CTTCCTAGGCATGCCTGTGAAAAATAACATTGCAGCTCTACGTCAGTCTCCAGGACAGAATGGCACAAGCTTCCATGGCTGCATCCGTAATCTGTATATCAACAGCGAACTCCAGGACTTCAGAAATGTGCCACTGCAAGTGGGAATTCTGCCAGGTTGCGAGCCTTGTCACAAGAAAGTTTGTGTGCATGGAACATGCCATGCTACCAGCCAGTCAAGCTTTACCTGTGAGTGTGAAGGAGGATGGACTGGACCCCTCTGTGATCAACAAACTAATGACCCGTGTCTCGGAAATAAGTATGTCCTTCCT ..:..:.........x.x...:.:....:.x...x....:..:...x.:..x..:.....:..x..x........:...........x..:..x..:........:..:..x.........x::..x.....:x.....:::..x...:....x..:..:.....x..:........:..x....:x.....x........xx.:.x.......x..:....:.....:.....:x.:.:........:x..:...........:....::..:........x..:..:...........x..:.:.x.. 310M 237/310 76.5% 310/94230402 0.0% 0/310 0.0% 4102645 NA +113944 chr4 + 190214555 20617415 20617414 20620650 3236 CTCCTGTGTTCCTCCTCCCTGTAGATGCGTACATGGCACCTGCTTGCCCATCAATGCGTTCTCCTACAGCTGTAAGTGCTTGGAGGGCCATGGAGGTGTCCTCTGTGATGAAGAGGAGGATCTGTTTAACCCATGCCAGGCGATCAAGTGCAAGCATGGGAAGTGCAGGCTTTCAGGTCTGGGGCAGCCCTACTGTGAATGCAGCAGTGGATACACGGGGGACAGCTGTGATCGAGGTAAG---CCAGCCCCACTGGGCACCTCATTCTCTTGGCAAAGCAAGAGGGGTCCCATGTCTTTGAAAAGAGAGGGAGAAAAAGTGAAAAAAAAAAAAAAAACAGGAGCAACAGAGACAGAGAGAGGGGAGTGACAGGAGAGAATACTAGGTCTTCTCACTACTTGCAGTTGCTGCTATTGATTTATTTTCA-----AGTATTTTGAAGGCACCAGCTGTGAAATGACCTTAAACCTCCACCGCAAGATTGTATACAGCCTTCAGATGCTTCT-CACAAGTTGATTTGTTGTAAAAGAAATGCTCCTTTTT----ACCTGATGGAGAAGCACATTT-------ACTTTACTCCTGTCTTACCTTTACCGGCTGTTCTCATCCGTATATATTATTAATTCATCTTCTGGCACAGAGAAGATGGTCCTCTTAATTCTGCTC-TAGTTTTAGTACAAAAT-GACCTTTGGCCTT--AGAATCGACTGATTTATCACAGCAAATCATGTGGGTGAGAGGAACGGAAACAGGCTGACTTCTTAGTTCACCTTCCTCCTTCTCCTTTGTCTGCGTGATCAGAG------------CTCGCCTGGCCT----CCAGCTGGCACGGATTTTGTTTTGTGTGTCCAAGGGACGAGACAAGAGGAACGTGCCCATGGAAGCTTTTAGCAGATGTCTCTTTTTTGAACTACATACTTCATACTGGGGTAATTTATGAAGTTAATGGAATGTTACTTGTATTAAGTAACAGATTGGATAATATTAAACTCCAGGTCTAATAAATAAAATGGCATACTCTCTGAAACTGCTCCCTGTGGTAAACAAAACCAGCTGTTAGTAGTGTAAAAACAGAAGATGTGTACTTTTTTTCCTTTTTTGCAATGAAAGAAAATATTTAGGAATCCAATTTTCTTGTCACTGCAATAGCATTGTATTTATACTCTACATA---ATAGCATTCACTTTGCTGAAAATA---------GAGACTAAAAAGAAGTATTTTTCAAAGAATAGGAGGCCGTGCCACCAGCTAATAATATGT---------AAAGCAAGTTAC------------AAAGGGGAAGCAAAG--GCTTCTGAATTAAGTTGTGGATTCACAGTCACTCTGCATGACTTACA----------GTGACTGTT-CTTAAAATGCTTGTGCTTTTTGTTCTTTTCTAGAAATCTCTTGTCGAGGGGAAAGGATAAGAGATTATTACCAAAAGCAGCAGGGCTATGCTGCTTGCCAAACAACCAAGAAGGTGTCCCGATTAGAGTGCAGAGGTGGGTGTGCAGGAGGGCAGTGCTGTGGACCGCTGAGGAGCAAGCGGCGGAAATACTCTTTCGAATGCACTGACGGCTCCTCCTTTGTGGACGAGGTTGAGAAAGTGGTGAAGTGCGGCTGTACGAGGTGTGTGTCCTAAACACACTCCCGGCAGCTCTGTCTTTGGAAAAGGTTGTATACTTCTTGACCGTGTGGGACTAATGAATGCTTCATAGTGGAAATATTTGAAATATATTGTAAAATACAGAACAGACTTATTTTTATTATGAGAATAAAGACTTTTTTTCTGCATTTGGAAAAAAAAAAAAAGAAATGCTTGAACTAAAGCTTCCCCTATGCTGGAGAAG-TATGAAG--AAAGATATACCTGGAGACATTAGAACAGCGATGGGAACC-------ATTGCAACTCGGGTCCATCTTTGTAACATGCTGAAGACAAGCAGAAGC---ACATGCACGAGGGACAGAGGAGCTACTGTGCACTGCTGTGAAATTGCCCAGAGCATAAAACCTGTGTACCCTCCTTCACATCAACCAAGTTCACT--------AGGACATACCAAGCACATGCGTGTGAATGAGGATGCAAGGCAAGAGAATGGAACTCCAGAATTCACAGATAGAACAAATGGATGAGAAATATTTCATGC----AAAATATAAAGTGTCCTGAGGATCTG-GGTTCCATTTA--CGAGAGGAAATGAAAG-TGCTAAAATAAATTTT---------ATCTTC------------CTTTTAAATGTCAGCATGTCAGCAGAAGCAGCACACAAAAG-----TCTTTACCATTTTCCAGTATTAATTTTTTTGTAATATAAATGATAAAGGAGATGATAAAGAACCAATAGATTATTGATAAATAAATTAGTAATAATATGATTTTTTGTTTCTATGAGTTCT--AAACAGCCCTATACAGTATTCAGTTTCCATGAGAAATATTTATTGTATCAAAGTACATTGTACTTAA-CATTTTAGGCCAT-CCTTTTACTGTTCCTTGATGCTTTAATATATATTAATTTATAATTATCCTGATATTTTTGTACATTTTTC----------AAACTTAAAAATCAGGATTTTTTTTTTTTTTTTTTTGGCAATAGTACTAACATAGGGTTTTATCTTGGGATACATATGTATTGGTCTG----------------------TTTGTTGACCTTGACATCTGATCAC-TGATGTCAATG------------------ACCTACTGGCCTC-------------ATTCAGGACACCTGCAGAGAGTATGCAAAGTCCGAGAGAGGAAAACAGAAATCTGTATGTGAGATGGTCATTGTACAGAAAGAAGTGGCCCCTCTGCAACATGTCCTCACAG-AAACGAAATGGTGTGTAGCAATCAACACTAGAAAGTAGACCTTTTGCAAATTAATATGTCCTTGACCTTTTTTGCCCTTTTGTGGGGGTGAGGTGGGGATAAAAAGACTGTCATATCAAGAACTGTGACTTTTCTTTCCCTCAAACAATAAAACTCCTTTATTATCTTAATGCT-CCCATGTTAACATGTTTGCTGCTAAATTACAATGTAGAATTGATAATGGTTTATAGTGAACTGTGCTCTTCCCTCATTAAAATCCCAGGGTGCCCTGTAAAGATGCAGATGTTTCTTCCTGAAA----ACTTCTTTTTTTACAAAGAAAA-TTAGATGTACATGTATAATTCAGTGTGCTTTGTCTTTCTCCAGATTAATATCGGTTACACTGCTGATGTTTGTAAATTAAACAGATATTTACTTCATTAACAGC--TTGGTGGTGTTCTT------AG---AAATTGCACAATAGGCCACTCCTTAAGAATTTTTTAATCAAAA-------TGATACAGAAAGAATAAGGAAGAAAA chr4 - 94230402 16518713 16518712 16521986 77708417 77708416 77711690 3274 CTCTTGGGCTTGTTTCCCCTGTAGATGTGTGCATGGTACCTGCTTGCCGATCAATGCATTTTCATACAGTTGTAAATGCCTGCAGGGACATGGGGGAGTCCTCTGTGATGAAGAGGAAATGCTGTTTAACCCCTGCCAATCCATCAGGTGTAAACATGGCAAATGCAGGCTTTCAGGACTTGGGAAACCATATTGCGAATGCAGCAGCGGATACACGGGGGACAGCTGTGATAAAGGTAAAAAATAAAAATCAAAAATCATGTTATTGTTTTGGTCTTGGAAAAGAGGTT---TGTTTT--------------------------------ATTAAAGCATGAACAGCCAA----------------CGACATTACCAACTTTTTTTTCTCCACAACACACACATTTGTTGCTTTC--TTTTTTTTGACCATCAGAATTT-----ATCTCAG-TGAGAGAAGAA-TCAAACTTTTCCCATGACTTTATTTACA--TTTTGGATATTTTTTCACCAAATGTTTTGCTGTGAAAACTTTTTTTCTTTTTTTTGCTTTTATTCAAAAACACATTTTTACTATATTTAACTACTACCTT----TTACCTGCTGTATCTTTCTGTATTTATTGTTTCTCTGCCTTCTGCAACTGAGAAGCCAAATCCAATGATTCTGCTCCTAGTTTTATCACAAACTCTACTTTTGACCTCTCAGCTTCAACTGATTTATCACAGCGAATTATGCAGGTGAGATGGATGAAAACAGGATGACTTTTTCCCCTACCTT------TTTCCTTTGTCT-----ATCAAAGTTTTCCCTCTCCCTCTCTTTCCCTTACCCCAGATGGCATTTATTTTGTATTGTACGT-----AAATGTGAATAGAAGAATATGGTTGTAGAA-CTTTTAACAGATGTCTGATTTTT----TGCTGGTTTTATACCTCAGTAATTTATGAAGTTAGTGGAATGTAACTTGTATTAAATAACGGATTGAATAATATTAAACTCCAGGTCTAATAAATTAAATTGCATGCTCTCTGAAACATTCTCCTATGATAAACAGAACCAGCTGCTAGCAATGTAAGAACAGAAGATGTGTA-----------TTTTTATAAAAAAGGAAAAGATTTAAGCTTCCAATTTTCTTGTCATTGTAATAGCTTTGTATTTATGGTTTACATATACATAATATAAACTTTACTGAACATAAGAGGTGTAGGAAATAAAACTCAGCATTAATCAAATTATGTTTGATAGAACAACTAGTTTCCATTATGTGCCTGAGCAAAAGTAAAATGCTGTTTTCAACTGCAATTAGAAATAGAGCATCTTCTTCAGCAA--TGT-------CAAACATTCTT--TGACCTGTATCTCAGATGTGTATCTCTTATTTTAAATG-------TTTTTTTTTTTCCACAGAAATCTCTTGTCGAGGGGAACGAATCCGAGATTACTACCAAAAGCAGCAAGGGTATGCTGCGTGCCAGACGACCAAGAAGGTATCGAGACTAGAATGTAAAGGAGGATGTTCAACCGGGCAGTGCTGTGGACCACTAAGGAGCAAGAGACGGAAATACTCTTTTGAATGCACTGATGGGTCGTCATTTGTGGACGAGATTGAAAAAGTGGTGAAGTGTGGCTGTACAAATTGTCCCTCCTAA--GTGTTCCTGTCACACTTGTCTTTTGAAAATGTTGTATACTTATTGACCGTGTCGGACTAATTAATGCTTCATAGTGGAAATATTTGAAATATATTGTAAAATACAGAACAGACTTATTTTTATTATGAGAATAAAGAC--TTTTTCTTCATTTG----AAAAAAGATTCAAGTGCTTGAACTGAGACTTCTCATAATCAAGAGGAGCTTTGAAGAAAAAAAAAGACCTGGTAACATTGCAACAGTGATGGGAAACTTAACTACTTTTAACACGGATTCTTCTTTATAACATGCTGAAGATACACTGACACTATACATACTCGACTTTCAACTTAACAGCT---CAGAGATGAAATGTTGATCAGAACATGTGTCTTGTTTTTTCATTTTCGTATCAGTATATTTTATTGTCTTAACAGACCATACCAATCACTTACCTATGGATGAGGATGCA--------------------------TACAGAGATAATTATTGTATGAAGTACATTTTATCTTTCAGAATTATTAAGCATCTTGAGAAGATGAGGTCCCATTTAGTGGATGGGAAATGGGAGATATGAGAATATACTATAATCCTGAAATCTCCTGATGATGTACACTTTT--ATGTCAGCATGTTAACAAAAGAAGCATACAAAAAGTGTTTATCTGCCCTTTTCCAGTATTAA-TTTTTTGTAATATAAATG-TTTGGGGGATGATGAA-----AATAGATTATTGATGGATAAATTAGTAATAATATGGATTTCTGTTTCTATGAGTTCTAAAAACAACTCTATACAGTATTCGGTTTCATTGAGAAATATTTATTGTATCGAAGTACATTGTACTTAACCCTCCTAGGTCATCCCTTTTACTGTTTTTCAATGCtttaatatatattaatttatatttGTCCCAGTATTTTTGTATTTTTTTTTTAAAGAAAAAGACTTAAAAATCAGGATTTTTT--------------GCAATAGAACTAACGTAGCATGTCGTCTTGGGGTAAATGTTT-TTGGTCTGTTCCTCCCCATCCCTTTCTCCTTTTCTTTTCCTTAGAATCTGACCACTTGGTGTCGCTGAATCTGAAAGTGATGACAATCTGCAGTTTTCACGTACAGCAGATATTCAGGACACCTTCCAGGAACCTATACTGCGTGACAGAAAATGTC------TTTTACACTAGGTGGCAATTGTAGAGAAATTAATTTTCCCTATAT-ACA-GTACTTACAGAAAATGAGATGGCATGTAGAAAATGGCATTAGAAGGTAGATC-TTTATAAATTAATATTCCCATGGAGCCCTTTACCTTTTTTTTATAAAGAAAAAAAGAAAAAAAGGCTGTGCTATCAAGAACTGTGACTTT------CCCCAAATAATAAAGCTACTTTACTGCCCTAATGTTCCCCACGTTAACATG-TTGCTGCTAAATTATAATGTAGAATTGGTAATCATTAATAGTGGGTTGTGTTCTTCTTTCAGTAAAA-CCCAGGGTACCCTGTAAAAATGCAGATGTTTTTCaattttattttattattttttttacaaaaaaaaGTTAGGTGTACATGTGTAATGCAGTGTGCTTTGTC-TTATTTGGACTGATATCAGTAATGCTACTGATGTTTGTAAATTAAACAGATATTTACTTCACTAACTGCTTTTATTTGTATTCTTCTGAAAAGTTCAAATTGTCTAACA-GCCTTTAATTAAACACTTGTAGTTGCAAACAGTATTTGGTATAAAGAAAAAAAAAAAGAGAA ...:..x.:.:x.:::...........:..:.....:...........x........:..:..x.....:.....:...:..x....x.....:..x....................::xx...........x.....:x.x....:...:..:.....x..:..............x..x...x.:..x..:..:...........:........................x:......:---:x.:xx:..xx::x..:x.:...x.:....:xxx.x..:..:...:---...:..--------------------------------.xx...:..x..:..:.x:.----------------:....xx.xx:.x.x:.xxx...:.x..x:..x::..x...:....x.:--...x....x.-----..x....-----::x:...-..x..:.x..x-.:....:.::x..:::.xx..:.x....--:..::...::..:.-...x.:x..x....:...:...:xxx.x:.:......----x::.x..xx.:..:.......-------.:..x...x..::...----.....x.....x:::x..:....x....:..xx.::::......xx..x......x:::x:.:xx.:.........-........x:.....x.-x..:....:...:--..xx..:................:...:...::.......x.:.:.:.......x......:..xx:::.....------.:..........-----....:..------------...x.:.xx...----....x.....:xx.......x....::..-----::.:.x..xx...:...::..x:::.:...-......:.........xx.....----.:.xx::..:....:xx:................:........x...........:....:.....:............................x....x....:...........xx:::...:..:......:.........:...:.:.....:...............-----------.....::..x:..:.....x.....:.xx................:..:......x..........:x.:......---...::..xx.....:.....x...---------.::.x.....xxx..:...xx.....xx..:xxx.::x.x:.x..:..:.xx:.x.....---------....:..:x.:.------------x..xx:...::.:..--x.....xx.x:..--...-------..:x..:...x--....:.::.----------..:x..x..-:..x.....-------.....x..:..::x:......................x.:..xx.......:..............:..x........x.....:..:...........:..xx..:....:..:.:...x..:...x..:xx.................:..:.........x.:..............:...........:..x..x..x............:....:..............:........:.:x...x:x......--::::...:.x..xx::.......x.....x...........x..........x........x............................................................................--.......x......----......:.xxx..:..........:.::....:.x..xx.x:...:..-.x.....--...:.x.x......x:.....:x.....:........x.-------x..x:...x...:.:.x.....:..............:.x:.x..x:.---....:.x...xxxx..:xxx.:.x:..---..xx.x..x:.x:...x:....:...:x:x.:...x.x::.x::...::....::xx.x..:.:.--------..:x........x...x.:.x.:..:...........--------------------------:.....x.x..:x.x..x....::x.:....:..x:----:..x...x...::..:....:.xx..-...:.......--x..x:.......::..-.::x.:....x.:.x.---------....:.------------.....--............:.:..:...x....:......:-----.x.:.:..x..............-..................-.xx:..:......:..-----..............::...................:x...:................--.....:.:.............:.....xx....................:.................-.x.::....:...-............::.::.........................x..:...:::..........:x.....:----------.:.....................--------------.......x......:...x:.x.::.......:..x..:.x.-........----------------------...x..xx....::x......:...-..:....:x..------------------.:..:.x.x::..-------------.............x.x::..::x.::.xx.:x:..x...::.x:x.------:.x..:::x..:...:x......x.....xx.:.xx:....x.::-...-..x..:....-...:..:....::.....x..x:::..:.....:.....:.-...::..........x:..x..:xx:::...:..:....x.x:x::x..::x:::..x......:....xx...................------..:....:......:..x.....:.::.:.....:.-....:.........-..............:............:....x:..x......:::....:.....::...x.....-........:.........:............:.:xx.xxx.----.:.x:............:....-....:.........:....x..............-..x.:::..:.:.....:..x.::..:..................................:....x..--..:x.x..:.....------..---......:x:..:.-...x:.xx....:x.:..x.x:x.xx...-------..:..:.:.:.:..x..::....:.. 241M3I46M3D6M32D20M16D49M2D10M5I7M5D7M1D11M1D28M2D14M1I37M4I21M7I16M4D76M1I17M1I13M2I74M6D12M5D7M12I12M4I29M5D30M1D23M4D173M11D76M3I24M9I60M9I12M12I15M2I13M2D3M7D11M2D9M10I9M1I9M7D259M2D138M2D14M4D48M1I7M2I39M7I48M3I27M3D65M8I37M26D36M4I26M1I11M2I16M1I16M9I6M12I5M2D34M5I23M1D18M1D16M5D57M2I67M1I13M1I70M10I23M14D42M1D8M22I25M1I11M18I13M13I46M6D45M1D3M1D10M1I41M1D90M6D36M1I14M1D67M1D41M4I22M1I34M1D69M2I14M6I2M3I13M1D29M7I26M 2269/3040 74.6% 3274/94230402 0.0% 430/3040 14.1% 4098702 NA +3232 chr4 + 190214555 20629513 20629512 20629572 60 TTCTCCTTTTTTTTTTTTTCCTTATTCTTAGGTTGTTTCCCACTTTTTTTTTTTTTTTTT chr4 - 94230402 90430984 90430983 90431043 3799360 3799359 3799419 60 TTATTATTTTTCTCTTTTTCCCCTCTGTGAGGTTGCGTCCCACTTGTTTTTTTTTTTTTT ..x.:x.....:.:.......::x:.x.x......:x........x.............. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -69801471 -24428931 +11736 chr4 + 190214555 20666998 20666997 20667243 246 GGAAAAAAGGCTCAGAATTATCCTGGCTGAATTTGGCATTTGCTACAGTCTTTGATCTCGGATGCAGTAACGTGTCAGCCAGACCAAAGTCATTTTATATAGAGGTCTGCATAAGCGAAGTGGAGGGACTTCATGGTTAATTGATTAAAATGGTCCAAAGAAGGTGTGAGATCAAAGGGCTGCTCACTGGTTTTATGTTTCCCTGGGGTCCCGCAGG-CCAAGTGGGTGACACAAA-TGACCTTGGGC chr4 - 94230402 16530622 16530621 16530866 77699537 77699536 77699781 245 GAAAAAAATCCACATAATTATCCTGGCTGGATGTGAAGTTTCCTTCAATCTTTGATCTATAATGTAGTAACATGTCAGCTAGACCAAAGTAGTTTTATGTGCAGG---AAATAAGACAAGCTGAGTAGCTTCATGGTTAATTGATTAAAAGGTTCTAAAGAAGGTGCAAGATCAAAGAGCAACTTAATGGTTTTATGTTACTCTAGAGAACTGTTGGTCCACTTGTCTGACAAAGACTGACCTTGGGC .:......xx.x..x..............:..x..:x:...x..x..:..........xx:...:......:.......:..........x:......:.:x...---:x.....xx...:x...x::......................x.x..:..........::.........:..x:..:.x............x.:..:.:.xx.:.:x..-...xx..xx.....x.:.-........... 105M3D109M1I18M1I11M 185/243 76.1% 245/94230402 0.0% 5/243 2.1% 4136376 NA +4055 chr4 + 190214555 20695517 20695516 20695595 79 CTGCAACCTCCACCTCCTGAGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTACGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCAC ..:..:..:xx.x..:...:.........x...x..x.x........::...........:.:....x..--....... 70M2D7M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 2498391 NA +3776 chr4 + 190214555 20707784 20707783 20707873 90 TTTTCATTTTTTATTTTAGTTTGGTGAACAGTCACGAGTGCCTTCTGCATTTGCAGCTATTTACTCTAAAGGAGGTATTCCTTGCAGGTA chr4 - 94230402 16545372 16545371 16545461 77684942 77684941 77685031 90 TTTTCTTGTGTCCTTGCAGTTTGCTGCTCCTTCTAGAACACCTTCTGCGTTTGCTGCTACATATGCTAAAGGTGGCATTCCATGCAGGTA .....x.x.x.:x..x:......x..xx.xx..xx..:::........:.....x....:x..:x.......x..:.....x........ 90M 64/90 71.1% 90/94230402 0.0% 0/90 0.0% 4162412 NA +3907 chr4 + 190214555 20707784 20707783 20707873 90 TTTTCATTTTTTATTTTAGTTTGGTGAACAGTCACGAGTGCCTTCTGCATTTGCAGCTATTTACTCTAAAGGAGGTATTCCTTGCAGGTA chr4 - 94230402 16546265 16546264 16546354 77684049 77684048 77684138 90 TTTTCTTGTGTCCTTGCAGTTTGCTGCTCCTTCTAGAACACCTTCTGCATTTGCTGCTACGTATGCTAAAGGTGGCATTCCATGCAGGTA .....x.x.x.:x..x:......x..xx.xx..xx..:::..............x....:x..:x.......x..:.....x........ 90M 65/90 72.2% 90/94230402 0.0% 0/90 0.0% 4161519 NA +6343 chr4 + 190214555 20709665 20709664 20709815 151 CTAACTTTTATATTTT----AGATTGGTACATGGTTCAGTAAAACACAGATTACAGTGGGAATGTCCTCCTGAAAGTCTTTCATTTGATCCACTTCTTATTACTTTAGCTGAGGTAAATATGCCATCTCTTGAATATTTATCAGAAAATAAACAT chr4 - 94230402 16547293 16547292 16547433 77682970 77682969 77683110 141 CCAACTTTAATTCTTTGTATAGGTTAATGCATGGATCAGTAAAGCACAGACTGCACTGGGAGTGCCCTCTTGAAACAGTTCCTTTTGATCCTCTTCTTGTTACTCTAGCAGAGGTAAATGT----CTTCTTG----------GGAAGATAAGCAT .:......x..x:...----..:..::.:.....x........:......:.:..x.....:..:....:.....xxx..:.x........x......:.....:....x.........:.----::.....----------:...:....:... 16M4I101M4D7M10D13M 106/137 77.4% 141/94230402 0.0% 18/137 13.1% 4162372 NA +11830 chr4 + 190214555 20712785 20712784 20713544 760 CAGGGTCTGAGAGAGACTAAGCATCCATACACTTTTGTGTCAAAGGAGGGTTTTAGAGAATTACTTTTGGTCAAAGGTGCTCCTGAAAAAGCTATTCCTTTGCTACCTAGACTGATTCCTGTGCTAAAGGCAGCTCTGGTATG------------------------------------TCATTTATTTCAT-------------------------TGTACTTTATATTTG-------AAAACATGATAGAA---------------AAGAAAGCTGTAATATATTTAGAATATTGTATGCCTTTTTCCCTCCATATTATATGCAAAGTAGTCCTTTAT--CTGTGATTCTGACACATTTACA-----------GAATTAGGCAACTGTTACTCAGGG-------------------------------CCA-----GATAACTACATACTTGAAGA-----CATCTTTAGAGGATGTACTA-AAGGTAAAAAGGG-ACATTTTAAGTA------ATTAGAGGAAGT---------------AATGAACCT----------------CAAATCAG------CCTTTCTGTATGCTACATATATTTTAGT----TAATGCTTCAGTCAGATGGAAAA----TTTGTTTTTTGC-TTCTAGATGTCCTGTGTTGAAGGTTATTTTTAAAATTCTAGGTTTTGTTGACTATCTTCTGATTGTAGATGTTTAATCTT--ATCCTTTTCTCTACTTGCTTGCCCTTTTTTCTAACCTATCTTTTCTTTCCTTTTCTCCTCTCTTCCCTGATGTCCATACATCCCCCAACTAACCAACCTTACAGGTCCATTCGGATGATGAAGTGTTTGAAAGAGGATTGAATGCTCTAGTTCAGCTAAGTGTCGTTGTTGGTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCGTAAG chr4 - 94230402 16554035 16554034 16554933 77675470 77675469 77676368 899 CAGGGTCTGAGAGAGACAAAGCATCCCTATACGTTTGTTTCAAAGGAGGGTTTTAAGGAATTACTTCTGGTTGAAGGTGCTACTGAAAAAGCCATTCCCCTGTTGCCTCGTCTAGTTCCTGTGTTAAAGACTGCATTGGTATGTGTTACTCTTCTTGCAGAGATTTTCACaaatattttttatttatttttttaGAACTAGAAGAATTATTCTTGTCTGTTCTTCTTGTCTGAGATGACAAAGCACCATAGAAGTAGGTAAGAGTGTGAAGGTTGCTGGCAGGTGACAAAGTTGTAGTTGGCAGGGCTAAATTCAT----TGAGCCAGAAAGCCATTGGTTCCTGTGTTTCTCCAACAAATATAATTATTGTTATGAATTACTTAAGAATTACTCTGAGTTCATTATGTTTTCAACTAAAATGTTGGTTCCCAATTTTGATGTATCCACATTTTAAAAAAGTTCTTCCTAATAAGCTGTGCAGCACTGTACATAGGATACATTTCAAAAGTGAAATATTAGATGTAGTTTCCCTTGCTTGCCGAATGTATTTATTTGCATATCAAGTATAAATTAGCAGTGTCCtttttttatttt--atttaatttaGTGCAGTAATTTCACTGACAAATTGTGGAGGCTTTTGTTTTCTACTTTCTGGTTTTCCAGTAGTTTTAGTTA--ATTAAAAGTACAGTAATAA--AAATACAGTCATAAAATAGAGATTGCATTTTTGAAGAGTTTGTGCACTTGTCTGAATATTAGTCTGACAGGACTTCTTTTCCTTC--------------------------------------------CCTTAAAGGCCCATTCAGATGATGAAGTATTTGAAAGGGGATTAGACGCTTTAGTTCAACTGAGTGCTGTTGTTGGCCCATCTCTTAACGACCATCTTAAGCATCTGCTCACAAATGTAAG .................x........x..:..x.....x................::.........:....::........x..........:.....::..:.:...x.x..::........:.....:.x..x:.......------------------------------------.:........:x.-------------------------...x...:x.:.:..-------...:..:x......---------------...:xx....xx.x:.:x:x.::x.:.x..xx..xxxx:.xxx.:...----.:x..x.::x..:.x..x:.--.....x....xxx...xx..:.-----------......xx:..xx:......x.:.-------------------------------...-----...:xx.x..:.:..x..:.-----.x..:.x.x.:.x...:.x:-.xx...x.x...:-......:..:x:------......x.x...---------------....x.::.----------------:....:..------.....:.x...x:.--..x..x......----....x::x.x.x..:..x.x::.----........:.:.-....:.x.x...x..:x.xxx:....--x......x.x:..xxx.x:--:.x..:xx..xx.xx:....x:..xx..:..--.xxxx...x.x:.....::..xx:x..xx...:..xx:x...:.:..:.:.:--------------------------------------------.....x...:......:...........:........:.....::.:...:.......:..:....::........:..x.....x...........x...........:....::..... 143M36I13M25I15M7I14M15I48M4D20M2I22M11I24M31I3M5I20M5I20M1I13M1I12M6I12M15I9M16I8M6I14M2D12M4I23M4I12M1I26M2D19M2D31M2I52M44D121M 487/706 69.0% 899/94230402 0.0% 247/706 35.0% 4158750 NA +8608 chr4 + 190214555 20713424 20713423 20713544 121 CCTTACAGGTCCATTCGGATGATGAAGTGTTTGAAAGAGGATTGAATGCTCTAGTTCAGCTAAGTGTCGTTGTTGGTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCGTAAG chr4 - 94230402 16557148 16557147 16557268 77673135 77673134 77673255 121 CCTTAAAGGCCCATTCAGATGATGAAGTATTTGAAAGGGGATTAGACGCTTTAGTTCAACTGAGTGCTGTTGTTGGCCCATCTCTTAACGACCATCTTAAGCATCTGCTCACAAATGTAAG .....x...:......:...........:........:.....::.:...:.......:..:....::........:..x.....x...........x...........:....::..... 121M 101/121 83.5% 121/94230402 0.0% 0/121 0.0% 4156276 NA +6139 chr4 + 190214555 20724786 20724785 20724897 112 CCCCCTAATCTTACTTT---AAAAGCTTTCCAAGAGATTAATGGACAAGAAATTCAAAGAGCCAATCACCAGCGCATTACAAAAGCTAGAGCAACATGGTGGAAGTGTAAGTAGA chr4 - 94230402 16555823 16555822 16555937 77674466 77674465 77674580 115 CCTCTTTATTTTACTTTTCCAATAGCTTTCAAGGAGATTGATGGACAAGAAATTTAGAGAAAAAATCACTGTTGCTTTACAAAAGTTGGAGCAATATGGTGGAAAGGTGAGTTGA ..:.:.x..:.......---..x.......x.:......:..............:.:...:xx......::x:..x.........:.:......:.........:x..:...x.. 17M3I95M 87/112 77.7% 115/94230402 0.0% 3/112 2.7% 4168963 NA +3193 chr4 + 190214555 20727192 20727191 20727353 162 TTAGATACTTTCTAGGCAT-------ATTCCTGCAAATATAATACCTATTAGGGGAACTCTGCATGATACTAATGATGCTCAATTTTTTTCTGTTGACAGGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCA chr4 - 94230402 16563754 16563753 16563912 77666491 77666490 77666649 159 TTATATAGTTTATAGACATGATGTGAATGCTCTCAAATGTAGTGCTAGTGCGCCTTACTTTGT------TTAAATATATTCTATTTTTGTCATCAGGCAACAGTGACT----ATCATCAAATCAAAAATTCCAACCTATTGTTCTGTATTCCCCTGAGCAAAAAATCCA ...x...x...x...:...-------..x.::x.....:..:.:.:x:.xx.xxxx...:..:------:...xx..::..x......x..xx:x.:..:x:.x.x..----...........x...........x..:..:..::...x.:x:...:x..:::.x... 19M7I37M6D39M4D57M 97/152 63.8% 159/94230402 0.0% 17/152 11.2% 4163438 NA +3193 chr4 + 190214555 20727192 20727191 20727353 162 TTAGATACTTTCTAGGCAT-------ATTCCTGCAAATATAATACCTATTAGGGGAACTCTGCATGATACTAATGATGCTCAATTTTTTTCTGTTGACAGGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCA chr4 - 94230402 16560924 16560923 16561082 77669321 77669320 77669479 159 TTATATAGTTTATAGACATGATGTGAATGCTCTCAAATGTAGTGCTAGTGCGCCTTACTTTGT------TTAAATATATTCTATTTTTGTCATCAGGCAACAGTGACT----ATCATCAAATCAAAAATTCCAACCTATTGTTCTGTATTCCCCTGAGCAAAAAATCCA ...x...x...x...:...-------..x.::x.....:..:.:.:x:.xx.xxxx...:..:------:...xx..::..x......x..xx:x.:..:x:.x.x..----...........x...........x..:..:..::...x.:x:...:x..:::.x... 19M7I37M6D39M4D57M 97/152 63.8% 159/94230402 0.0% 17/152 11.2% 4166268 NA +14250 chr4 + 190214555 20728619 20728618 20730147 1529 ATTTTATTTTGCTT---TTATTTTTTCTTTTTGAAATACAAAATGTGCACATTGAGTTTACACAAACACGTGATGGCAAATTTCAG-TGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGCAGCTTTCAACAT-----------CCTATCTCTACACCAGAATAGATACCTGATTTATTGTTGC------AAAGACAGTTGCAAATTTCCTCCT---TCTGTAGCCTCTTGGTCTTTGTGATATTTCTACAAAACAGGGACGATGT-GTGTGGCTT--------TAGTAATGTGGCAACTTTACAGTTTTGGCTAAGAT-----GA---------TTAAAAATAATCTGAATTATGATGAGCTAAATCATACTGTAATCTGGATTAGTTGTTGAGCACTTATTTTCTACTAAATCTTGGTAGTAGTTGT-----CAATGTAATGGAACCACTGGTGCTTTCAAAGTGAATTTTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTG--GGGTAGTCAAGGTTTCTTTCTTTGTCCCTGAATGGCTTGTAATATAAAT---AAACATGCTGTAAGGAAGTCAGGGGAAAGAGGACAGAT-TTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACTATATACTGGAGGATAGATATCCTGACCCTTTGCAT-------------ATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAATGATTGATACTAATGATTGATACAATAGAAAACAG------------CCTGTAAGAAAGATTGAAC------AAATCCAAAATTATTA-TATAGGCCTTGGCT----------------------------------GTAACATATT------------ATGGAAAATTAAATGCTTATTAA---AATAAGT---TTTATTAGGCATATGCTGATATCTGATAATAAAC-TAATTTTTAAATGTTTAATAATTTTTAAATGTTTAAAAATGCCAGATAAAACTAATTTCTAACA-----------------------GAAGGTG-------GGAAGGCCATAGAAACTGGAA----------------------CTATGTGTTT--TTTTAATTGTTGTAATCTTGTTTCCTTAAAGTATATAAATGGAATTTAAATGGAATTACAGCATTCAAACATGAAAATTAATTTAATTTCTGGAAATTAAATGCAGATGTCACTATAT----TAGAAAAC---------------CATTCAAAATCCTAGGACTGAATACA-TACAAATGAGTAGCAAAA--AACACTGATATTTTAAAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAAC--CAATAAAACTATATGCCAGATTCTATTACTTTTGAATATTCACAGAGTATGAAATGAGTTAGACCATCCCCTGAA--------CTCAGTGGCATTATGAAAAGGATGCAAATTTATAACT--GAAAGCTCAAATCTTTTGGGGATTGCTTTA----TATTAAAACAAAGCTTGTTTGCATAAT--ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTA----AAAGTGGTAGCTCCAACTTTAAGG----GTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGATCTATTTGACAAGTTAAATCACATTTTCAAAGAGCTGCATGGAGCGCATTATGTTTTCATCCTGTAAGGGAGAAACACA chr4 - 94230402 16564747 16564746 16566370 77664033 77664032 77665656 1624 ATTTTTCTTTGTTTACTTTATTTCTTATTTTTTTT-TACAAAATTTGCACACTTAGTTTACACAAACACTCTACAGCAAATTTCAGGTGTACATGTATTGTACTACTCTTA--TTCTACACTGGTGATAGCAGAGCAGCCTTCAACATGCCTCTAACATTCCATCTCTACACCAGAATAGATACCTGATTTTTTTTTTTTTGCAGAAGAATGTTTACAACATTCTTTCTACATCATTAATCCCAT----TTCATGTT--TTCTGCAGCAATGTCACGATGAAGTTTGGCCTATCTCTGATAGCATTTCACCTATTGGAAAGTATTGGCATAAATCTCTGGACAATGTATCTTAAAAATTACATGTATTGGAAGGGGCATTAGTATATTTTAG---------------GTACATACATTTTTATCTAGGTTTTGATAATTAAGGTTTCTCCAATCATAATGAAGAAATGATCCTAAAAAAATTAATGC---------------------ACTTATCACATATAGATAATATTGTATAGTTGAAGCTTCATTTTTT-TTCCTGAAT--CTTAAGATACATACTACAAAAATGCTG--------------------ACACAGATGTTAGCTTGT----CTAGTAG------TCATTAGTAGGTGTTACTGCCTAGTG----------ATCTTCATTCTGTGCACTGAAGAGGAATGAAAATTTTAAAGTAACTTCTTTTTTTTTTA---CTTTATTAAAGGCAAC---AAGACACATACTCACGGGAACAGTGGTAGGAACCAGTTAAGTTTCCTTCATTAAAAAAAAATTCAAATTCAGAAGATTCATAATTTTCAGCAAAGAACTTTGTTTACATGTCCAAGAAGAATTAGAAGTACAGCATGTAGAACATGTTGACATTTTTGTCATGATAAATTAAATGCAGATTTACTAGATAAACATATTTGATAGCAGCTTACCAGTATTTGTTAGGGAACAGAACTACTGAAACAATCGTAATTTAAATGTGTTT------GTTGTTTAACACTTCTTCCTCTCAAGTTACCTATTTTACTAGGTCTGGGAGGTGTTTCTGAAGAGGACCAAAGCAAGTCAAATGTGAAAGGCAATTGCTGCAAGCTATGCATTGGACATCAGTGATAGCACT----TTAACTCAAAGTAT-TAATTAAAAAT--ATGAGGACTACACCGTACAAACATGAAAA---------------GAAAATACATGGTAATGCCTCTGTATAAATTAGAAGCTGAGCCTTAATAAGTACGCTCAAACACCCAGAGCTGAATCCAGTACAAATGTGTAGCAAAACTAAGACTATTTTATT----TCCTTGTGAGATTAAA---TCTATTTTATCTAGGGTTTGGAATGATAATAAAA-TGCATGTCAGGTTCTGTT----TTGAG--------GGGTTTGAAATAAAACACTGACTTCTCAGAATGATCTTGCTAAGTAGCCACTGCTGAAGTACTAAAATGTATAATTTTGAAAGAT------TTAGGGAGAAAACTTTAATAACAAAAAAAAAAGACTTCTTTGCATATTGCATTTCTCAGTATAAAGCTGAGTAATTTAT-TTATGGTAGAGTGGGAAATCCATCTTTTAGATTATGTTGCAGAATTGCTTATATTTGTCCATTAG-TTGTTGACCTAATGCCTTCATTAAATCACATTTTCAAAGAGCTGCATGGAACGCATTATATTCTCATCCTGTGAAAAACAAACACA .....x:....:..---......:..x.....xxx-........x......:.x...............x:x.::...........-........................--....................:.....:........-----------:.:.............................x..x..x:------..::.::x..:...xx...:.:..---..xx..::.:.x.----..::..x.--....:..:x.xx.xx......x-..x....:.--------...:.x.x::x.x.:.xx.x...x.....xx.:..-----..---------........x.:x..x...:x:.x.:..xxx.x:...:.x..:---------------.x:..:x:.....:xx...::.:...:..:.x:xx..-----....xxx.xx...xx.x..:.x..xxx...:.x...x:---------------------::..:.:x:xx:....:.:.:--.x:....::.:.:...x..:...-.:.......--...:x:...:.x.:---...x......--------------------:x......-..:..:.x.----..:x...------.::...x..:.::.....::x..x..----------...:.x.::..x....:-------------.x:.:.xx..::.x.:.:x....x...x.---...:x.:..xxx.x..---.x..:xx.....x.:.:xx:xx::::...:..x...------------.x.xx..:...:...x..x------.:..:..x....x.:.-:.x..:x...x.:.----------------------------------:x.....:..------------...:x...........xx...x.---:....::---...:x...xx::x.:.:::...:..x..:x:...-x..:.x:.:..xxxx.x:......xx.x:.....------.:::xx...x...xx..:..xx..-----------------------.:.....-------:..:.:...x..x..x.x:..----------------------.....::..x--:x.:.:.x:.x.:.x.----..xx..:.......-...x.::..x.--.xx:.:.:....x.:.x............---------------....x..x...xx:...:.x..:...----.....:x:---------------.::.....xx..:..::......x..-........x.........--..x...:x.x.x..----..x:..xx.x:.x...---..x..xx.x:.xx..x.xx....:--:.......-.::...:...:....:..----....:--------.:..x......:.:x:.xxxxx.:.:.x...--------..x...:..xx:xxxx:...x.:xx....x.....:.--.....x.------..xx..:..xx:.....----:.xx....x..::...x........x.--..x::.....:.x........:...:...-:..----.:.....x.:x....x....x..:----..x.:.....x.:.:.:.......::..:.-..xxx..:...x.xxx:xx:..............................:........:..:.........:.:::.x....... 14M3I18M1D50M1I24M2D35M11I40M6I24M3I13M4D8M2D22M1I9M8I35M5I2M9I42M15D37M5I38M21D21M2I23M1D9M2D14M3I10M20D8M1I9M4D7M6D26M10D17M13I29M3D16M3D36M12I19M6I16M1I14M34I10M12I23M3I7M3I34M1I34M6D24M23I7M7I21M22I10M2I16M4D14M1D11M2D29M15D26M4I8M15I26M1I18M2I14M4D16M3D24M2I8M1D18M4D5M8D31M8I37M2I7M6D17M4I27M2I29M1D3M4I24M4I30M1D86M 925/1379 67.1% 1624/94230402 0.0% 395/1379 28.6% 4163872 NA +10799 chr4 + 190214555 20728621 20728620 20728826 206 TTTATTTTGCTT-TTATTTTTTCTTTTTGAAATACAAAATGTGCACATTGAGTTTACACAAACACGTGATGGCAAATTTCAG-TGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGCAGCTTTCAACAT-----------CCTATCTCTACACCAGAATAGATACCTGATTTATTGTTGC-----AAAGACAGTTGCAAATTTCCTCCT chr4 - 94230402 16561938 16561937 16562155 77668248 77668247 77668465 218 TTTACTTTATTTCTTATATTTTTTTTTT----TACAAAATTTGCACACTTAGTTTACACAAACACTCTACAGCAAATTTCAGGTGTACATGTATTGTACTACTCTTA--TTCTACACTGGTGATAGCAGAGCAGCCTTCAACATGCCTCTAACATTCCATCTCTACACCAGAATAGATACCTGATTTTTTTTTTTTGCAGAAGAATGTTTACAACATTCTTTCT ....:...::..-....x....:.....----........x......:.x...............x:x.::...........-........................--....................:.....:........-----------:.:.............................x..x..x:-----..::.::x..:...xx...:.:.. 12M1I15M4D50M1I24M2D35M11I40M5I24M 169/200 84.5% 218/94230402 0.0% 24/200 12.0% 4166683 NA +9601 chr4 + 190214555 20731964 20731963 20732818 855 TATGATAGCTG-----AATTGATAGTTATTACACTTTCATTACT-------TACTTTTTGGCAGCTTTCAATGAACTCATCTATGGTAACAACCCCATCTTTATTTTTGTCCATTTTCTGTTCAGGAAGAAAACAAAAAT-TGTATTTAGACTTATCCCTTAATACCCTCACACCTGGACCAAATGAGCTGAAGCTGATAAAAAGAAAACCTAGCTGCTTATTTATTTCACGTGGAGGAACTGTTTCAGAGCAGGAACCAGCAGTTTTTTAGAGATAAAAATGATAGGGCCAAATGCTTCTGGCTTTTCCCTTTTCAATATAATGTGGTGAAGATGTAGAGTCACTCTGTCCTAGGTAAAATCCCACCTTCTAGATGTGACAGAGCTTGCGCAATTTGCTGAAACTTTCAGAGCTTGCTTTTTGTCTCATCTGTAAAATGAGATTAATGAGGATTTATAGGAT-----TCTTG---TAAAAACTGAATGAAAACAAAACT-------TGTGAAACATGAGAACTGTTTAGTGTTGTATCTTGGATTTAGTGAATGTTCAATAAATGCAGTTATCAGCATTGTAAATTCAAAACCAAAGCTATTAAATTAATAGGATGCTAAATACTGTTTTGTTTCAGTAAAAATTATTTTCCTTTGCTCTCTTTTGAATCATCGTGGTGCATGGCAAACATCAGGAAATTTTCTCCTAACTTCATGCCCTCTTGACTTCTGTTTTAATT--CCTACCTGAAAAAATGTTTCAACGTGTTGTCTGGGAGCATCTTCTTTGAGGACAGGATATGTACATTTACCCATCATATCGTATATTGCTTTCATTATATCAAGCATTTCCTGAA---AAATAAAAGGCACTCACGTGAGGCTGCA chr4 - 94230402 16575806 16575805 16576449 77653954 77653953 77654597 644 TATGATAGCAGTAGCCAGCTGATACGGATTCAACACTTATTACTGGGTACTTACCTTCTGGCAGCTCTCAATGAATTCATCTATGGTAACTACTCCATCTTTGTTTTTGTCCATTTTCTGTTCAGAAAGAA--CAAAGATGTACGATTACACTC-------------------CCAAGATCTACT-------------TAAAAAGTCATTTTTAATATTAATTTCACTGACATG-----------TTGGCCTAGGGAACAAC----------------------TAGGCCAAAATGCT-----------------------------GTAATGATGTAGGAC------GTACTA----------CACT---------------AGCTTGAAGAGCTTGTTGAAA-------AG-------------------GTGAGATGTGGTGAGTG--GATCTGTGAGACAAGTGCCTTGGGATGAACCATGGAGAATAACAAAATTGACAGGCTATGCAACATTGAAAATCTttc-tattctat-tacaatctact--acattctat-----------tctacattcta----tacaatctattctattAAATCAATAAA----TGAAAATCTTTCTACATCTGCAAACA----------------------GAGTAGTCGT--------------------------------------------TTTGGTTCCCTATGTTACCTGACCCACCTGGAAAAATGTTTCCACATGTTGTCTAGGTGTGTCCTCCTTGAGAACAGGATAAGTGCATTTCCCCATCATATCATATATTGCTTTCATGATATCAAGCATTTCCTGAAGGGAAAAAAAATACATGCAATTCAGAGTGCA .........x.-----.::.....xxx...xx..x:.:......-------...:..:........:........:..............x..:........:......................:.....--....:..-.:::x...x...:-------------------..x:..:.x.x.-------------.......xx.x::.x:x.::.x....xx:.x..:..-----------.::.xx:...:.x..:.----------------------....x.x.......-----------------------------..:.x.......:::------..x...----------...:---------------......x:x.::...:.....-------..-------------------..:.:...x.:.x.:..--...:.:.::..:-----:....---.:..xxx..:.x:.x.......:.-------.:..x.....x::..x.x...x-.:..x...-.xx:..:..x.--.::...x..-----------..x:....x..----:.x..:.x.xx.........:....::----.:..x.::x..:.::x..x.:...x.----------------------..:.x:....--------------------------------------------.:.x.x:::..:.x...x:.--..:.....:...........x..:........:..x.::..:..:.....:........x..:.....x...........:..............x...................---...x....x:..:x..xx.x..:x.... 11M5I28M7I80M2D7M1I13M19D12M13D36M11D17M22D14M29D15M6D6M10D4M15D21M7D2M19D17M2D12M5I5M3I24M7I22M1D8M1D11M2D9M11D11M4D27M4D26M22D10M44D20M2I115M3I28M 439/611 71.8% 644/94230402 0.0% 277/611 45.3% 4156158 NA +9761 chr4 + 190214555 20731964 20731963 20732818 855 TATGATAGCTG-----AATTGATAGTTATTACACTTTCAT-------TACTTACTTTTTGGCAGCTTTCAATGAACTCATCTATGGTAACAACCCCATCTTTATTTTTGTCCATTTTCTGTTCAGGAAGAAAACAAAAATTGTATTTAGACTTATCCCTTAATACCCTCACACCTGGACCAAATGAGCTGAAGCTGATAAAAAGAAAACCTAGCTGCTTATTTATTTCACGTGGAGGAACTGTTTCAGAGCAGGAACCAGCAGTTTTTTAGAGATAAAAATGATAGGGCCAAATGCTTCTGGCTTTTCCCTTTTCAATATAATGTGGTGAAGATGTAGAGTCACTCTGTCCTAGGTAAAATCCCACCTTCTAGATGTGACAGAGCTTGCGCAATTTGCTGAAACTTTCAGAGCTTGCTTTTTGTCTCATCTGTAAAATGAGATTAATGAGGATTTATAGGATTCTTGTAAAAACTGAATGAAAACAAAACTTGTGAAACATGAGAACTGTTTAGTGTTGTATCTTGGATTTAGTGAATGTTCAATAAATGCAGTTATCAGCAT-TGTAAATTCAAAACCAAAGCTATTAAATTAATAGGATGCTAAATACTGTTTTGT-TTCAGTAAAAATTATTTTCCTTTGCTCTCTTTTGAATCATCGTGGTGCATGGCAAACATCAGGAAATTTTCTCCTAACTTCATGC--------CCTCTTGACTTC-TGTTTTAATT--CCTACCTGAAAAAATGTTTCAACGTGTTGTCTGGGAGCATCTTCTTTGAGGACAGGATATGTACATTTACCCATCATATCGTATATTGCTTTCATTATATCAAGCATTTCCTGAA---AAATAAAAGGCACTCACGTGAGGCTGCA chr4 - 94230402 16572133 16572132 16572781 77657622 77657621 77658270 649 TATGATAGCAGTAGCCAGCTGATACGGATTCAACACTTATCACTGGGTACTTACCTTCTGGCAGCTCTCAATGAATTCATCTATGGTAACTACTCCATCTTTGTTTTTGTCCATTTTCTGTTCAGAAAGAA--CAAAGAT---------------------GTACGATTACACTC---CCAAG--------AGCTACTTAAAAAGTCATTT---TTAATATTAATTTCACTGACACG-------TTGGCCTAGGGAACAAC----------------------TAGGCCAAAATGCT-----------------------------GTAATGATGTAGGAC------GTACTA----------CACT---------------AGCTTGAAGAGCTTGTTGAAA-------AG-------------------GTGAGATGTGGTGAGTGG---------------------------------------ATCTGTGAGACAAG-----TGCCTTGGGATGAACCATGGA------GAAT--------AACAAAATTGACAGGATATGCAACATTGAAAATCTttctattctatta-caatctactacattctattctacattctatacaatctatt------------ctattAAATC---------TATTGCAACAAT--GAAAATCTTTCTACATCTGCAAACAGAGTAGTTGTTTTGGTTCCCTATGTTACCTGACCCACCTGGAAAAATGTTTCCACATGTTGTCTAGGTGTGTCCTCCTTGAGAACAGGATAAGTGCATTTCCCCATCATATCATATATTGCTTTCATGATATCAAGCATTTCCTGAAGGGAAAAAAAATACATGCAATTCAGAGTGCA .........x.-----.::.....xxx...xx..x:.:..-------.......:..:........:........:..............x..:........:......................:.....--....:..---------------------:...xx.:....::---....:--------....:x.x....::xx.::.---.xxx....x.......xx:x.x.-------.::.xx:...:.x..:.----------------------....x.x.......-----------------------------..:.x.......:::------..x...----------...:---------------......x:x.::...:.....-------..-------------------..:.:...x.:.x.:..:---------------------------------------.::.....:...x.-----..::.x.x.x..x.:.x....------....--------..::x.:..:x...x..-..:..xx.::...x:xxxx.....xx....-:.:xx.:...x..x..:..:.::-...x:..x..x:....------------..x..:....---------:..x....xx..--.:....:..:::x:.x..x..x:.--------:x.:...::.:.-.:.x...x:.--..:.....:...........x..:........:..x.::..:..:.....:........x..:.....x...........:..............x...................---...x....x:..:x..xx.x..:x.... 11M5I24M7I84M2D7M21D14M3D5M8D20M3D23M7D17M22D14M29D15M6D6M10D4M15D21M7D2M19D18M39D14M5D21M6D4M8D17M1I30M1D23M1I16M12D10M9D12M2D24M8I12M1I10M2I115M3I28M 445/621 71.7% 649/94230402 0.0% 262/621 42.2% 4159831 NA +7961 chr4 + 190214555 20734622 20734621 20734744 123 CCTTACCTCTTTAGTGATGTAGCCATCTTTATTTATGTCATACAGATTAAATGCCCAATTGAGTTTTTCTTGTACTGTCCCCCGGAGCAAAATGGAAAGACCTTTGATGAAATCCTGAAAAGA chr4 - 94230402 16577097 16577096 16577219 77653184 77653183 77653306 123 CCTTACCTCTTTAGTTATGTATCCGTCCTTATTTATATCATACAAATTAAAAGCCCAGTTCAGTTTCTCCTGCACTGTCCCTCGGAGTAAAATTGAGAGACCCATAACAAAATCCTAAATGGA ...............x.....x..:..:........:.......:......x.....:..x.....:..:..:........:.....:.....x..:.....:x.:.::.......:..x:.. 123M 99/123 80.5% 123/94230402 0.0% 0/123 0.0% 4157525 NA +3045 chr4 + 190214555 20735495 20735494 20735547 53 TAACTTGATTAAATTCATTTAGTGTTTTTTTTTTTGTTTTTTTTTTTTTTTTT chr4 - 94230402 88043779 88043778 88043831 6186572 6186571 6186624 53 TGGCCTGATTAAATTAATTTGACTTCTTTTGTTTTGTTTTTATTTTTCTTTTT .::.:..........x....:::x.:....x..........x.....:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -67308284 -26922118 +3027 chr4 + 190214555 20735502 20735501 20735547 46 ATTAAATTCATTTAGTGTTTTTTTTTTTGTTTTTTTTTTTTTTTTT chr4 - 94230402 78870619 78870618 78870664 15359739 15359738 15359784 46 ACTAGATACATTCAGTGTTTTTTTTTTTGTTGTTTGTTTGTTTTTT .:..:..x....:..................x...x...x...... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -58135117 -36095285 +3012 chr4 + 190214555 20748873 20748872 20748931 59 TGTGTGTGTATGTGTGTGTGTGTATATATATATATATATATATATGAAATACATATATA chr4 - 94230402 26165535 26165534 26165593 68064810 68064809 68064868 59 TGTTCGTGTGTGTTTGTGTGTATCTGTATATACATAAATATACAATAAGGACACATATA ...x:....:...x.......:.x.:......:...x.....:.xx..:x...:..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -5416662 -88813740 +6308 chr4 + 190214555 20749657 20749656 20749785 129 CTTACCTCGAAACTCACAGCTCCATTGTGGTCTGTATCAAATGCATTGAACAGAAAATGTGCATATGTTGTAGAGTCTGAAATGGTAAAAAGGGA----GTATCATTAAGTCAGTGTTTCCATATCCTACATA chr4 - 94230402 16583230 16583229 16583356 77647047 77647046 77647173 127 CTCACCTCAAAACTTACAGATCCATTGTGATCAGTGTCAAATGCATTAAACAGAAAATGTGCATAAGTTGTGGAATCTGAAATTTAAAACAGTAAAAATGTGTCAT------AGTAAGCCCATCTTCTTCATA ..:.....:.....:....x.........:..x..:...........:.................x.....:..:........xxx...x..x:.----..:....------...:xx:....x.:..x.... 95M4I7M6D21M 98/123 79.7% 127/94230402 0.0% 10/123 8.1% 4166427 NA +7536 chr4 + 190214555 20758813 20758812 20758916 104 GTACTTACCTCCCTGTGGAAAGAACTGCGAGTAAATCTCTTTGAAGGTTTCTTCATTAACAACACCACTGGGGCATTCCTAGGGAAAGTGGCAGAGAAGCAATA chr4 - 94230402 16587721 16587720 16587820 77642583 77642582 77642682 100 GTACTCACCTCCCTGTGGAAAGAACTGAGAGTAAATCTCTTTGAAGGTCTCTTCATTGACAACACCACTGGGACATTCCTGGAAAAAGT----TAGAGGCAATA .....:.....................x....................:........:..............:.......:.::.....----x...:...... 89M4D11M 90/100 90.0% 100/94230402 0.0% 4/100 4.0% 4171092 NA +3467 chr4 + 190214555 20803665 20803664 20803775 111 GAGAAAGAAAGAGAGAAAGAGAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGACGGA chr4 - 94230402 76099074 76099073 76099183 18131220 18131219 18131329 110 GATAGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAG-GAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAGTACCAAACACAGA ..x.:.........::.:.x.....xx:.:...:...x:.:::...:..:.:...xxx...-....x......::.:...x...::..x..:x:.::.x.xx..:x..:.. 61M1D49M 69/110 62.7% 110/94230402 0.0% 1/110 0.9% -55295409 -38934993 +3093 chr4 + 190214555 20803678 20803677 20803765 88 AGAAAGAGAGGGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAG chr4 - 94230402 27835411 27835410 27835498 66394905 66394904 66394992 88 AGCAAAAGATTGAGAGAAAATGAGGAAGGGAGAAAAACTGAGATAGGAGGATGAAGGAAGGTAGAAATTGAAAGAGACTAAATGAAAG ..x..:...xx......:.:x...:...:....:.:.xx....x..:::..x.........x..:..xx:.:::..:xx.:.x.:... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% -7031733 -87198669 +9029 chr4 + 190214555 20848496 20848495 20848715 220 ACATAAAATAAAAAAAAATAAAGCAATGAATGCAGACTTTGGAGCCTA-GCAATTTATTGTGAAGTGCCACTTGTATTAGACATGCTGCAGAGATGCTGGCTCCAAAGATTAATGATGGCAGTAATCATGATTCCAATTTATAGCAAATGCAATGAAAGGCAGCCAGACCCCAAACAGAGAAACCCTACGGGGATGGCATTGGAATAATAACATAGCAGCA chr4 - 94230402 16605994 16605993 16606214 77624189 77624188 77624409 221 ACAAAAGAAAAAGAAAGACCACATGTTGAGTGCATGCTTGATAGTCTGTGCAATTTATTGTGAAGTACCTCTTGTACTAGGCCTGCCACAGAGCTATTGGTTTGAAAGGTTAATGACTGCTGCAATCACAATTTCAATTTACAAGAAATGGGATGACAGGAAACCAAATACAAAATGGAGAGGTCCCACTGTGATGGCAGCTGAGCAACAATTCATCAACA ...x..:.x...:...:.:x.x:::x...:....x:...x:x..:..:-.................:..x......:...:.x...::.....x.::...:.:x....:.......:x..x.:.....::...:.......:.:x.....x:....x...x.:...:.:x.x...::....:::..:..x.x.......x:x..::..:..:x:.x..:.. 48M1I172M 148/220 67.3% 221/94230402 0.0% 1/220 0.5% 4242502 NA +9428 chr4 + 190214555 20850514 20850513 20850690 177 GAAGGTAAAGTCAAAAAGAAAGTTCTTACATTCTTAAATCCTCTGTAAAGGATCTGAAGCTCTTTCTTGGTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCTCCAGTTCATCTTCCACGCTGTCTGTGGAGGAAAACAAGAAAGAG chr4 - 94230402 16609342 16609341 16609515 77620888 77620887 77621061 174 GATGGTAAATTAAAAACTGAAGTACTTACATTCTTGAAACCTCTATATAAGATCTGAAGTTCCTTCTTTGTGAATTTACTCTGTGCTTCCAGCAGTTCAAGAGCTTCAGGTCTATGCCGTACTGTGGCCATTTCCATTTCATCTTCTACAGTATCTGC---AAAATGCAAGAGACAG ..x......x.x....xx:....x...........:..x.....:..x.:.........:..:.....x..:.....:.....x........x..:.....:........:.x.....xx..x........:....x.........:..:x.:....:---::..x:.....:.x.. 158M3D16M 135/174 77.6% 174/94230402 0.0% 3/174 1.7% 4241172 NA +3436 chr4 + 190214555 20860228 20860227 20860289 62 CTCCCAGGTTAAAGCGATTCTCCTGGCTCAGCCTTCCAAGTAGCTGGAATTACAGGAACGCC chr4 - 94230402 18197139 18197138 18197200 76033203 76033202 76033264 62 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.::....x...:.x...x.xx...........:.............:....x.x:.:.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 2663089 NA +3068 chr4 + 190214555 20863888 20863887 20863996 109 ACTAATATTTATAGCATTTGTTTTGTGTA-AGCTCTCTCTTTCATGAGTGTATATGTA-TATATATACACACACACATACATATACATATATACATATGTATAACTAGATA chr4 - 94230402 21129735 21129734 21129845 73100558 73100557 73100668 111 ACAAAAATCTAAATCCTTTTTTATTTGCACATCCCTAGCTCAAATATCTGTAGTTATAATGTATTTATACACACACACACAGGTGCGCATGTACATAGATACAACTAGATA ..x..x..:..x.x.x...x..x.x..:.-.x.:..xx..:xx..:xx....xx.:..-.:...x..:.........:...x:.:.::..:......x:..:......... 29M1I28M1I52M 73/109 67.0% 111/94230402 0.0% 2/109 1.8% -265847 -93964555 +3113 chr4 + 190214555 20863976 20863975 20864037 62 ATACATATGTATAACTAGATATACGTACATGTAAATGTGTGTATGTATACATACATATGTAT chr4 - 94230402 17520749 17520748 17520810 76709593 76709592 76709654 62 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .:.x....:..x.xx:.....:..:.......:....:x.....:x.:....:.....:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 3343227 NA +3427 chr4 + 190214555 20864188 20864187 20864252 65 GTACATATGTATGTACACACATGCATGTATATATGCATATATATGTACACATATGTATGTATATA chr4 - 94230402 2899029 2899028 2899093 91331310 91331309 91331374 65 gtatgCATGTATATATTCAAATGCATGATTTTGTGTATATGTATGTAATCATATATATGTATATA ...:::......:..:x..x.......xx.x.:..:....:......xx.....:.......... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 17965159 NA +3142 chr4 + 190214555 20864221 20864220 20864297 77 TGCATATATATGTACACATATGTATGTATATATGCACACATATGTATGTACACATATGTATGCATATATGTACACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT .:...:x....:x:.::.:...........:..:.:......:xx..:..x..x...:.:..::.x...:..xx... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -31617015 -62613387 +3007 chr4 + 190214555 20864225 20864224 20864290 66 TATATATGTACACATATGTATGTATATATGCACACATATGTATGTACACATATGTATGCATATATG chr4 - 94230402 48167040 48167039 48167105 46063298 46063297 46063363 66 TATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .......xxx..:........:..x.:..:..::x.:....::x:.:...:.....::...:.... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -27302815 -66927587 +3356 chr4 + 190214555 20864225 20864224 20864297 73 TATATATGTACACATATGTATGTATATATGCACACATATGTATGTACACATATGTATGCATATATGTACACAT chr4 - 94230402 4481681 4481680 4481753 89748650 89748649 89748722 73 TATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...:.:.x.x..:...x..:...:...:......x.:..::.::.x......:x:xx:............... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 16382544 NA +3282 chr4 + 190214555 20864240 20864239 20864316 77 ATGTATGTATATATGCACACATATGTATGTACACATATGTATGCATATATGTACACATATGTATGCATATATACATA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTT--ACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....:.....:.:....:.x.:......x.--............x..:..xx.:...:.:::.::..:.:.x...:. 30M2D45M 53/75 70.7% 75/94230402 0.0% 2/75 2.7% 12468452 NA +3615 chr4 + 190214555 20876644 20876643 20876730 87 CTGCAACCTCCACCTCCTGGAGTGGAGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGACGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGG------GTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:..:..:xx.x..:....------.........x...x.xx.x.........:...........:......x::.::....:::. 20M6D61M 59/81 72.8% 81/94230402 0.0% 6/81 7.4% 2679518 NA +11610 chr4 + 190214555 20882540 20882539 20882780 241 TGCATGCAGGCCTAAAGAAACGAAACAAGAGTTTCGGAGGAAAAAAAAAAACAAAAAAACAAACTTGCTTTGAATAGCAGGAGACGACGTTTTGGCAGCTGAGCAGGGCAAGAGCTTCATGAGCCGCTCTTTAATGCTGCGCTTGGTGCTGTTCTGAGCGTACAGGAAACCTAGAAGATACAGGATCAGTTCTGTTAATGCTGTCTGCAGAGAGAAAAG-----GGACGTGCTGCAGGGTTTATCA chr4 - 94230402 16615858 16615857 16616089 77614314 77614313 77614545 232 TGCATGCAAACCTAAAAAAAAAAAAAACAAAATC--------AAAATCAAATGAAAAATAAAACTTGCTTTGAGTAACAGGAGATGTCGTTTTGGCAGCCGAGCAGGGCAAGAGCTTCATAAGTCGCTCTTTAATACTGCGTTTGGCACTGTTCTGAGCGTAGAGGAAACCTAAAAAATATATTATCAGGATTGTTAACATAGGTTT----GAGAACAATTTCTGTACATGCTGCA--GTTTATCA ........::......:...x:...x.x:.:x.:--------....xx...::.....xx.............:..:.......:.x............:....................:..:...........:.....:....::..............x..........:..:...:.xx.....xx:......:::x.x:.x----.....x.:-----.x..:.......--........ 34M8D165M4D8M5I12M2D8M 179/227 78.9% 232/94230402 0.0% 19/227 8.4% 4266682 NA +3084 chr4 + 190214555 20904310 20904309 20904355 46 TATATATGTATGTGTGTGTGTGTATATATATATATATATACAGATA chr4 - 94230402 19559286 19559285 19559331 74671072 74671071 74671117 46 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA ...x.x.x.x.............:...................x.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 1345024 NA +3170 chr4 + 190214555 20906004 20906003 20906100 97 ATTTCCCCTTCTTCTTCTTTCCTTTC------CCCTTCCCCTTCCCCTTCTCTTCCTCCCTCCCTCCCTCCCTTCCCTCCTTTCTTCCTTTCTTTTCTTTCTC chr4 - 94230402 17018314 17018313 17018412 77211991 77211990 77212089 99 ATTGCTTTTTGTCTTTCATTCTCATCAGTAAACTCTTC----TCCCATTCTATTCCTCTCTCTCTCCCCTCTCTCCATTTTCTTTCCCTTTCCTATTTGTCTC ...x.:::..x.::...x...::x..------.:....----....x....x......:...:.....::.::...x.::.:.:.:......:.x.:.x.... 26M6I6M4D61M 63/93 67.7% 99/94230402 0.0% 10/93 10.8% 3887690 NA +17048 chr4 + 190214555 20983785 20983784 20984314 530 AACAGCACAGACTG-GAGCGACCACTTTACCTTCCGAAAAATCAATCAGTCCCAGCAAATGAAGAAGCTTCAGAGATGCACATATAATCACAACAATACCCACTGTTTGCAGTCCTTCGGACTCCCACTCCAGAGTCAACATCCTCTGAGCTGGCAGAGCATCCCAGCCTCCAGACCCCTTTG-GAGTGGAGGGAGTTAATTACAGAATCGTAGCAACGTCAGGCTTGGAACAAAGACTTGCAAGGGGAAAAAGTGA-GCAGCTCCTGGCAGATGCACCCTGCAAAGCCGGCGGCCCCCCGGGGTGAGGACAGACCTG--GGCTAAAGTCCAGCTTCTCATGCT------GATCCTGG-------------------CATTTGGCTGGCGGGGCTTCCCCCCTGCTACCACAGCGCACGGACCTCTCCACTCTATGCTGCAGCCAGCGGGCGAGTACTTCGACTTCAGAGCTGCGAGGGAAACGTCTGTCGGAGAACTGGAGACTTTGCAGTGTCCGTGGCGAGAAGGGACACTCCTAGGAAACTTGCCCGGGAGAACAC chr4 - 94230402 16659319 16659318 16659844 77570559 77570558 77571084 526 AACAGCACAAACTGCGAGTGACCACTTTACCTTCAGAAAAATCAATCAGTCCCAGCAAATGAAGCAGCTTCAGAGATGCAAATATAATCACAACAATACCCACTGTTTGCAGTCCCTCCGACTCCCACTCTAGAGTCAACATTCTTCCAACAGGCAAATCATTCCAGTTGTCACACCAGCTTGCGATCAGAGGGA---AACAAGAGGATTTTACCAATAGTTTGCTTTGAAGAAAG--TTGCAGCAGTGCCAAGCGACGTTGCGCTGGGCTGTGGCAGCTCAC--------CAGCCACCCTAGCTGA-GATGGAATTATCAGCTAAAGCCCCACATCTCTTGTTTCTTTAAGTACTGGATTTCATCAGAGGTGAGTCAATTTGAGAGGCTGAGGTGGACCACTA--ACCCCCGGGCATGG-------CATGGTATCCAGCAAGCAGC---------CTT--ACTTCAGAGCTGCTGGAGGAACATCTGTGCCAGAAGTGCAGACTTTGCTGTGCCGGTGCCAAGAAGAAACGTTCCCTGAGAACTTGCACGAGGGAGCAC .........:....-...:...............x.............................x...............x..................................:..x...........:...........:..::x.:.x....:.x...:....::x:..x...xx:...-..x::......---..:x.x..:..:x..x...::x:xx....x...x....--.....:x:.x:xx...:..-.:x..x.:x...x.xx...x.:::.--------.:...x...x:.x...-..::..x:.:--:.......:..x:.x....x..:.------::.x....-------------------x.....:xx...x.:.x.xxx..x..:--...x.x.x...:..-------..:xx...x.x...:x....---------...--.............x:.:.:...:.....xxx....x..x.........x...:.x...x.:.....::..::...:x.::.......x..:.:..:... 14M1I168M1I11M3D38M2D19M1I25M8D16M1D10M2I24M6I8M19I27M2D14M7D20M9D3M2D99M 363/496 73.2% 526/94230402 0.0% 64/496 12.9% 4324466 NA +3135 chr4 + 190214555 21052999 21052998 21053062 64 AAAGATATGTATACACACACACACACATACACACACACACATATATATATATATAAATAAAAAT chr4 - 94230402 71167176 71167175 71167239 23063164 23063163 23063227 64 AAAGTCATGGCTGTAAAAAAAAAAAAATACACACACACACATATATATATATATAATTACAAGT ....x:...xx.::.x.x.x.x.x.x..............................x..x..:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -50114177 -44116225 +3406 chr4 + 190214555 21086942 21086941 21086989 48 TCTCCCTCCCTCCCTTCCTTTTCCTTCCTCTCTCTCTCTCTTTCTTTC chr4 - 94230402 17056203 17056202 17056250 77174153 77174152 77174200 48 TCTCCTTCCCTCTCTTCCTTTCCCTTCCTCCCTTTCTCTACGTCTTTC .....:......:........:........:..:.....x:x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 4030739 NA +3588 chr4 + 190214555 21087252 21087251 21087330 79 CTGCAACCTCCACCTCTTCAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGCCATGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..::.x:.........x...x.xx.x........::..................--.:..::.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 2890126 NA +3908 chr4 + 190214555 21135169 21135168 21135238 70 TTATAAAGTATATCATTGCTGCTCTCTGCTGGTCAAAAGCATTATTCTCTTCAATTAAGATGAGCAGAGG chr4 - 94230402 16721567 16721566 16721636 77508767 77508766 77508836 70 TTATAAAGTATATATTTGCTGCTCTCTGCTGGTCACAGAGATTATTCCTTTATTTTAAAACTTGCAGAGG .............xx....................x.::x.......::..xxx....:.:xx....... 70M 55/70 78.6% 70/94230402 0.0% 0/70 0.0% 4413602 NA +3908 chr4 + 190214555 21135169 21135168 21135238 70 TTATAAAGTATATCATTGCTGCTCTCTGCTGGTCAAAAGCATTATTCTCTTCAATTAAGATGAGCAGAGG chr4 - 94230402 16720139 16720138 16720208 77510195 77510194 77510264 70 TTATAAAGTATATATTTGCTGCTCTCTGCTGGTCACAGAGATTATTCCTTTATTTTAAAACTTGCAGAGG .............xx....................x.::x.......::..xxx....:.:xx....... 70M 55/70 78.6% 70/94230402 0.0% 0/70 0.0% 4415030 NA +3107 chr4 + 190214555 21153332 21153331 21153537 206 ACAAAAATTGTATTTTCAGTGTTATTTTAATTTGCATTTCTATTATGAATGACATTGAGCACTTTTTCTATGTGGTTAAAGGGCATTAGTATTTCTTTGTTAATTCTCTCTCTGTCCCTCTCTCTCTCTC------------------------------TCTCTTTATATATATAC-ATATATATGTGTATATTTATATATATATGTGTGTGTGTATATATATATATATATATATA chr4 - 94230402 27587979 27587978 27588192 66642211 66642210 66642424 214 ACAGAAATGATGTTTGCAGACTTCTTACAAATTACCTTTTCCTTAC-----------ACCACTTCTTTTATGAATTTACAAGAC----TGACCTCTGCATTA--------TATGTTCCTATCTCTACTTCAGTAAATGCAGCTGTAATTACTTAAATTGATGGCTTCATGCACTAACTGTATGTATGTGCATATTCATATATATACATTGGTGTATGAATATTAGTATATACGTATA ...:....x:.:...x...xx..x..x:..x..:.x...::x...:-----------.x.....:..:....x:x...x.:.:.----xx.::...x::...--------.x...:...x.....x::..------------------------------.xx...:..::.:xx..-:...:......:.....:.........::.xx....:.:x....xx:......::.... 46M11D27M4D14M8D20M30I17M1I59M 120/183 65.6% 214/94230402 0.0% 54/183 29.5% -6434647 -87795755 +3092 chr4 + 190214555 21153469 21153468 21153524 56 ATATATATACATATATATGTGTATATTTATATATATATGTGTGTGTGTATATATAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...........:..:.......:.:...:.x::.........:.:.:x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 1449195 NA +3223 chr4 + 190214555 21153475 21153474 21153575 101 ATACATATATATGTGTATATTT------------ATATATATATGTGTGTGTGTATATATATATATATATATATATATATGCTTTACTTGCTTTTCTATGAATTGTTGGTTCT chr4 - 94230402 40224636 40224635 40224736 54005667 54005666 54005767 101 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTG------------TTCAATATAATTTGTTGATTCT ....x....:..:....xx...------------.:.x..x.x...........:...:........x...:....:.:------------..:xx...:.x......:.... 22M12I45M12D22M 68/89 76.4% 101/94230402 0.0% 24/89 27.0% -19071161 -75159241 +3383 chr4 + 190214555 21157606 21157605 21157696 91 TGAGATTGGAAAATATTTTAAATAAAAAATAAAAACACATGATATCAAAATAGCAGGATTCTACTAATGCAATATGTACACAGAAATTGAA chr4 - 94230402 20791295 20791294 20791382 73439021 73439020 73439108 88 TGAGGTTAGAAT---CTTTACAGAAAATCTAAAAATACATAACATTAGAGTAAAAGTATTCCACCTAAGCAGTGTGTGAATAGAAATGGAA ....:..:...x---:....x.x....xx......:....:.:..:.:.:..:x..x....:..:x.x...:.:...:x.:......x... 12M3D76M 61/88 69.3% 88/94230402 0.0% 3/88 3.4% 366311 NA +3388 chr4 + 190214555 21165435 21165434 21165543 109 ATGTTTGAAAGCATCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATTATACTAAAAATTAG--GTATTCAAAT----------GAAAATTATTTAATTCATACCTCACACCATGTACAAA chr4 - 94230402 35419723 35419722 35419841 58810562 58810561 58810680 119 ATGTTGGCAAGCATCAGAAAAGAAAAAAGAAACAGGAAAAAAAAAACTTTTTGAAAAATGTGCTGTATGTGAATATAAATTGAAGAAAACTTTTCAAT--GTTCCTAAAAACATATAAAAA .....x.x........:....:......:...x.::.....:....:.x.x:x......xx.--....x::...----------.....:.x..:...--:.x...x.x.x...:..x... 62M2I10M10I14M2D21M 78/107 72.9% 119/94230402 0.0% 14/107 13.1% -14254288 -79976114 +3057 chr4 + 190214555 21180611 21180610 21180693 83 GAAACTACTGTTGGCAAGTTGCAATGGCTTCTTTCCTCTAATGTTTATATGTGTGTGTGTGTGTGTATTTGTGTGTATATATA chr4 - 94230402 26940285 26940284 26940362 67290041 67290040 67290118 78 GGAATTATCCTGGGAAAGTGGTAAA-----TCTCTCTCTAATGTTTTTTTGTGTGTGTGTGTTTGTGTTTGTTTGGATGTTTA .:..:..::x.x..x....x.:..x-----::.::...........x.x.............x...:.....x..x..:.x.. 25M5D53M 56/78 71.8% 78/94230402 0.0% 5/78 6.4% -5759674 -88470728 +3078 chr4 + 190214555 21185347 21185346 21185458 112 TTTTCTTCTTTATCTTCCTCTTCCTCCTTTTCTGCTCATTCTCCTCCTCCTACTCCCTCTTCCTCTTCTTCCTCTCTGTCCTCTTCCTCTTCTTTTTCTTCCTCCTCCCTTT chr4 - 94230402 84765849 84765848 84765960 9464443 9464442 9464554 112 TTTTCTTCTTTTGCATCCTCTTGTTTAGTTTCGTCTTTGCCTTTGGCTCCTTTCTTCCCTTTTGTTGCTGCCTTTTTGTCTTCCTTTTTATCGTTTGCTGCCTTTTCTTTCT ...........xx.x.......x:.:xx....xx..:xx:..::xx.....x::::.:...::x:.x..x...:.:....:..:.::.:x..x...x..x...::..::.:. 112M 66/112 58.9% 112/94230402 0.0% 0/112 0.0% -63580502 -30649900 +3338 chr4 + 190214555 21185414 21185413 21185548 135 CTTCCTCTCTGTCCTCTTCCTCTT--------CTTTTTCTTCCTCCTCCCTTTTCTTCTTCTTCTTCCTCCTCCTCCCCCTCCTCTTCTCCTTTTTCTCTTTTTCCTTCTCCTTCTTCTAATCTCCTATTTTCCTTCTCTGCT chr4 - 94230402 2458513 2458512 2458655 91771748 91771747 91771890 143 CCTCTACTCATTTTTCTTACTCTTAAAATGTATTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGCTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTTTCCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACT .:..:x...xx.::....x.....--------:...::...::.:.:..:x.x.:.........xx.:.:......x::..::x...x....:x.::x:.:......:.x::.x..:x:.:x..x..x.:.:.:x.::..:.. 24M8I111M 79/135 58.5% 143/94230402 0.0% 8/135 5.9% 18726901 NA +3117 chr4 + 190214555 21185421 21185420 21185530 110 TCTGTCCTCTTCCTCTTCTTTTTCTTCCTCCTCCCTTTTCTTCTTCTTCTTCCTCCTCCTCCCCCTCCTCTTCTCCTTTTTCTCTTTTTCCTTCTCCTTCTTCTAATCTC chr4 - 94230402 42336608 42336607 42336717 51893686 51893685 51893795 110 TCTTCACTCTTTCTCTGTTTTTTTCTGATAGAGCACTTGATTTCAGTTCTTCCTGCTGTGACGCTTCATCCTCTGCTCTTGCTTTTTTTCCTACTTTTTCTTCTGCTCCC ...x:x.....:....x:.....::.xx.xxxx.x:..xx..::xx........x..x:xx.x.:..x..:...x..:..x..:........x..::.......:x..:. 110M 69/110 62.7% 110/94230402 0.0% 0/110 0.0% -21151187 -73079215 +8197 chr4 + 190214555 21190738 21190737 21191153 416 AAAGAAACTCTAATGGCCAGTAGCCATAAA---ATCTATTTACATATTCTTCCACCTC-TCAAGTCTCATGCAAATTAATG-TGTAATTACATTTAGATGGCGCAGCTGCTCTGACACTCTGCTCCCAGCTTTTATTTCTGAGTTTCAAAGGTTTCATAAGGAAACCTTGAAAGAAAAAAGTAAATATTTTGAAAAGGAGTTACAAT------TTGTCAGCAGTAATCCTTCCCTGGATAGGCAAAGAAAGGCAAATCTTGGTAGATGAGAGAATTGTGGCTTTTGAAAATAATAGCATTACACTGAAATTTAATCTGCTAGCGTTATTTTTTCCAAGCAAACCCTCTTTGCATTCA-------ATTTGTCATTTATTACAGTAAGAAGCAACAGGGTCCAAAAGAGAATTGTTTGCAGTAAGCACAGAGATAT chr4 - 94230402 16731627 16731626 16732032 77498371 77498370 77498776 406 AGATAAACTC-AATGGCTTTTAGCAAGGAAGACACTCATTTACATTCTTTTCCACCCAGTCTAATCCCAGGCAAATTAAAAATGTAATTATAT-----------GGCTGTTTTTTTCTACTAAATTCAGCTTT---------GTTTGAAGTGCTTAATATAAGATCTGTGAATGAAAAAA-TAAATATTCAGAAAAAAAAAAAGAATCGGCTTTTGTCACCAGAAATCCTTCCCAAAACAGAAAAAAAAAGTAAGATATTGGCATAAAAGTGAATCATGGCTTATGAATATAACAAAA-TATACAGTTGTTCAGTCTTCAAAGATTG-----CCAGTGTAAATCATCCCTGCATGCATTTCTTTCTTTGTCATTTAGCATACACAGATGTAAAACTCCTTAACAGGGAATAATATACAACAAGCAGAAAGTTAT .:.x......-......:xx....x.x:..---.:::........x:.:.......:x-..x.:..:..x.........x:-........:..-----------:....:.:.xx:x:x..:xx::.......---------....x..:x.:..x...x:::.x.:x....x.......-........:x.....::.:xx.x...------......x...x..........x::.:..:x...:....xx.:..x....:.x.x:..x....::......x....x....:.:x.-..:..x.xx:..:.:...x.x.:x:..:-----:.x:x.:...:.x..::.....x..-------x...........x:.:.xxx...x.:..x.xxx:::..x..:....x:.x.:..::.....x.:..x... 10M1D19M3I25M1I22M1I11M11D29M9D38M1D26M6I85M1D28M5D25M7I70M 255/388 65.7% 406/94230402 0.0% 46/388 11.9% 4459111 NA +3516 chr4 + 190214555 21200281 21200280 21200405 125 GATGTGTGTGTGTGTGTGTGTATATATATACATACATATATGTGTGTATATATA----------TATACATACATATATGTGTGTATATATATATACATACATATATGTGTGTATATATATATATACATACATAT chr4 - 94230402 40224673 40224672 40224793 54005610 54005609 54005730 121 GATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT---TCAATATAATTTGTTGATTCTGCATTCAT-----------TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGT ...x.x.............:.:........x........:...---.xx.....----------.x.:...x...-----------..:.:.:...x:..xx..x....xxx.:.x.....:.x....:....:. 43M3D8M10I11M11D49M 83/111 74.8% 121/94230402 0.0% 24/111 21.6% -19024392 -75206010 +3283 chr4 + 190214555 21200283 21200282 21200335 53 TGTGTGTGTGTGTGTGTGTATATATATACATACATATATGTGTGTATATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:....:.x....x..:.:....::..:.:.:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -49782346 -44448056 +3149 chr4 + 190214555 21200303 21200302 21200434 132 TATATATACATACATATATGTGTGTATA-----TATATATACATACATATATGTGTGTATATATATATACATACATATATGTGTGTATATATATATATACATACATATATGT-------------GTGTATATATATACATTACATACAT chr4 - 94230402 40224604 40224603 40224753 54005650 54005649 54005799 150 TAAACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACAT ..x.:.:...x..xx::.::...:..x.-----..:x........::..xx.x.x...::.xxx:x.:.x..x:x.:.:.......:...:........x........:...-------------x..xx.x.::..x.......:.... 28M5I79M13I25M 86/132 65.2% 150/94230402 0.0% 18/132 13.6% -19024301 -75206101 +3472 chr4 + 190214555 21200947 21200946 21201036 90 GTCCCTACTTTGCAAAAGAAGAAACTGAGTCAAAGAGTACTTAAGTGACTTGTCCAAGGTCACCCAGTGAATAAGAGGTTGAGATTCAAT chr4 - 94230402 29766004 29766003 29766093 64464310 64464309 64464399 90 GTCTCTGTTTTGCAGAAGGAGGAACTGAGGCAGAGAACATTTAACTTGTTTCTGCAAGATGACAGAATAAATCAATGATAAAAATTGAAT ...:..::......:...:..:.......x..:...::.:....x.x::..x.x....:.x..xx.:.:...x.:x.:.x:.:...x... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% -8565057 -85665345 +3484 chr4 + 190214555 21213377 21213376 21213459 83 CTGCAACCTCTGCCTGCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGACGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx:x..x.::........::x...x.xx.x.........:...........:.:...--...::......::.. 66M2D15M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 3016251 NA +3396 chr4 + 190214555 21226302 21226301 21226389 88 AGAGAAGAGAGGAAAGAAAGGGAAGGGAAGGAAGGGAAGGAAGAGAAGGAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATAA chr4 - 94230402 84397277 84397276 84397364 9833039 9833038 9833126 88 AGGAAACAAATTAGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGAATATGGTaaaaaaaaaaaaaaaaaa ..::..x.:.xx.:.......x.x........::.:.x::.:..:.....::.....:......x:x:.x..::..::..::...x.. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% -63170975 -31059427 +4743 chr4 + 190214555 21233854 21233853 21234065 212 AGTCAATATGACTTTG-AGATATCCATAACTAATATA---TATCACATATAACTAATATATATTATATATTATGTAATTATATTATATAAATATTACATATAACATATATAACATATATTATATAACATATA--TAACATATAACATGTATAATATATAACATATATAACATATATTATATATAACATATATAACATATATAACACATAACATATATA chr4 - 94230402 30253287 30253286 30253484 63976919 63976918 63977116 198 AGTCTAGATGACTTTACAGAAGTGCatta-taatataatgtctaaaatatatataatttaaaataaatatcaaataatt----tatGTTAGT-----------CATATAAAAC-TGTAGTATATAGTCTATAGTTAAAATTTA-CATGTATATTGTA--AAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTA ....x.x........:-...x:.x...x.-.......---.x.x.x.....xx....x..x.x..x....:.x:.....----...:.x.:.-----------......x...-.:..x......::x....--...x..x..-........x.:..--.x....:..::..........x...x....:.xx.:..::..::..:..x......:.. 16M1I12M1D7M3I39M4D9M11D10M1D18M2I9M1D13M2D59M 143/192 74.5% 198/94230402 0.0% 26/192 13.5% -9019433 -85210969 +3637 chr4 + 190214555 21233879 21233878 21234007 129 TAACTAATATATATCACATATAACTAATATATATTATATATTATGTAAT----TATATTATATAA---ATATTACATATAACATATATAACATATATTATATAACATATATAACATATAACATGTATAATATATAA chr4 - 94230402 20596464 20596463 20596597 73633806 73633805 73633939 134 TAATTACCATGTATATCATAACATTATAACGTG--aaataatatttaataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAA ...:..x:..:...xx....xx.:..xx.::.:--.x...x...x....----.:.......x..---...:.x:...x...........:.......:.....:..:..x.xxx....xx.x...:...x..x.. 33M2D14M4I12M3I68M 90/127 70.9% 134/94230402 0.0% 9/127 7.1% 637415 NA +3432 chr4 + 190214555 21234001 21234000 21234088 88 TATATAACATATATAAC-ATATATTATATATAACATATATAACATATATAACACATAACATATATAACATAACATAACATATAACGTAT chr4 - 94230402 48856165 48856164 48856253 45374150 45374149 45374238 89 TATACACTACATAAACCTATATGTTATATAGAATATACATAACATATGCAACACATAACAGCTGTATAATATCAGATCCTAGAAAGAAT ....:.x:.:...x.x.-....:.......x..:...:.........::...........xx.:..xx...x..x.x.x..x..x.x.. 17M1I71M 64/88 72.7% 89/94230402 0.0% 1/88 1.1% -27622164 -66608238 +3412 chr4 + 190214555 21234065 21234064 21234147 83 AACATAACATAACATATAACGTATATTATATATAACATATATAACGTATATTATATATAACATATATAACGTATATTATATAT chr4 - 94230402 62168884 62168883 62168963 32061440 32061439 32061519 80 AACATGAACTAATATACACTGTATATTATGTATAACATACACTGAGTATAACATATAT---ATGTATAATATGCACTGTTTAT .....:.xx...:...:.x:.........:.........:.:x:x.....x:......---..:.....::.::.:.:.x... 58M3D22M 57/80 71.2% 80/94230402 0.0% 3/80 3.8% -40934819 -53295583 +3984 chr4 + 190214555 21234188 21234187 21234307 120 TATTATATATAACATA----TATAACGT---ATATTATATA-TAACATATATAACATATATATAACATATATTATATATAACATATATAACATATATTATATATAACATATATTATATATAACATATA chr4 - 94230402 20596468 20596467 20596589 73633814 73633813 73633935 122 TACCATGTATATCATAACATTATAACGTGaaataatatttaataatttgtat------tataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACA ..::..:....x....----........---...x...x..-...:x.:...------....x....x...:.x....x...........:.......:....xx.::..x..xx.......x:..:. 16M4I8M3I10M1I10M6D70M 88/114 77.2% 122/94230402 0.0% 14/114 12.3% 637720 NA +3064 chr4 + 190214555 21234386 21234385 21234468 83 ATAACATATATAATATATTATATAACATATACTATATATATTACATATAACGTATATAATATATATTACATATAACGTATATA chr4 - 94230402 67910060 67910059 67910142 26320261 26320260 26320343 83 ATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACA ..x.......:....:xxx.x...xxx...xxx...:...x..x.....x:.......:.......x.:..:..:::....:. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% -46675674 -47554728 +3579 chr4 + 190214555 21247870 21247869 21248001 132 ACACACACACACACCACAGGTAGATATATATATATATATACACACACACACATATATATATACACACATATATATATACACACACATATATATATACACACACATATATATATACACACACACACACACACA chr4 - 94230402 73121078 73121077 73121203 21109200 21109199 21109325 126 ACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACA------TATAAATACGCCCACAGAGACACACA ....x....x.x..:::.:x:xx:.:.::..::....x:.:.....:.:...:.x.x::..:x::.....::....x::....:x:.....:.:x::...------....x....:.x....x.x....... 100M6D26M 77/126 61.1% 126/94230402 0.0% 6/126 4.8% -51873208 -42357194 +3249 chr4 + 190214555 21247923 21247922 21247995 73 ATATATATACACACATATATATATACACACACATATATATATACACACACATATATATATACACACACACACA chr4 - 94230402 7596413 7596412 7596479 86633924 86633923 86633990 67 ATACAGATGCATACAAATGTATATACACACGCATGTAT------ACAAACATATACTTACGCACGCACGCTCA ...:.x..:..:...x..:...........:...:...------...x.......:x..::...:...:.x.. 38M6D29M 51/67 76.1% 67/94230402 0.0% 6/67 9.0% 13651510 NA +3085 chr4 + 190214555 21247927 21247926 21248001 75 ATATACACACATATATATATACACACACATATATATATACACACACATATATATATACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.::::.::.:.::...x...:::.:x..:....:..::.x:....xx...:.:.............x..... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 12852139 NA +3098 chr4 + 190214555 21247937 21247936 21248003 67 ATATATATATACACACACATATATATATACACACACATATATATATACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::...x...:::..x..:....::.::.x:.:..xx...:...............x..... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 12852141 NA +3229 chr4 + 190214555 21247938 21247937 21248004 67 TATATATATACACACACATATATATATACACACACATATATATATACACACACACACACACACACAC chr4 - 94230402 8395795 8395794 8395861 85834542 85834541 85834608 67 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ...:.:.::.:.x...::...x..:...:::.::.x..:..xx...................x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 12852143 NA +3464 chr4 + 190214555 21247941 21247940 21248006 66 ATATATACACACACATATATATATACACACACATATATATATACACACACACACACACACACACCC chr4 - 94230402 7596413 7596412 7596478 86633925 86633924 86633990 66 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTC ...:.x.::..:...x..:...........:...:....:.x...:.:..x:..:...:...:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 13651528 NA +3118 chr4 + 190214555 21247952 21247951 21247993 42 CACATATATATATACACACACATATATATATACACACACACA chr4 - 94230402 45271687 45271686 45271728 48958675 48958674 48958716 42 CATATCTATATATACACACATATATATGTATACAAACACACA ..:..x..............:......:......x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -24023735 -70206667 +3118 chr4 + 190214555 21247954 21247953 21247995 42 CATATATATATACACACACATATATATATACACACACACACA chr4 - 94230402 45271687 45271686 45271728 48958675 48958674 48958716 42 CATATCTATATATACACACATATATATGTATACAAACACACA .....x......:..............:..:...x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -24023733 -70206669 +3592 chr4 + 190214555 21275852 21275851 21275940 89 CAAGGGTGTCCAATCTTTTGGCTTCCCTGGACCACAATGGAAAAAGAAGAATTGTCTTGGGCCAGACATAAAA----TACACTAACAGTAATG chr4 - 94230402 9885857 9885856 9885949 84344454 84344453 84344546 93 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg ..:.:x.:.....:...:..x........::........::x:..x.:.....::..x....::x.:x...:.----.:.x..:.x....... 73M4I16M 61/89 68.5% 93/94230402 0.0% 4/89 4.5% 11389995 NA +3549 chr4 + 190214555 21290973 21290972 21291054 82 ATTTTATA---GAAGAAGTAGAGGCTCAGAAAAGTTAAATAATTTGCCTGAGATCACACAGCTTGTTAG-AGCAGGGATTGTAGTC chr4 - 94230402 15193231 15193230 15193316 79037087 79037086 79037172 86 ATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTTATAGTC ........---.:..:.:.x..::......x..:.x......:..x...:..:...:.........:..-.::.:::x..:..... 8M3I58M1I16M 60/82 73.2% 86/94230402 0.0% 4/82 4.9% 6097742 NA +3118 chr4 + 190214555 21291843 21291842 21291939 97 GACTCCGCCTCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 - 94230402 62511295 62511294 62511389 31719014 31719013 31719108 95 GACTCTTCTCTAAAAGATAAAGAAAAAA--AAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAA .....:x.:::....:.x...:......--...:....x...::.x.:x.:xx.:x:...:.x::.:..:...:x....:......x....:.:x.. 28M2D67M 61/95 64.2% 95/94230402 0.0% 2/95 2.1% -41219452 -53010950 +3069 chr4 + 190214555 21291846 21291845 21291922 77 TCCGCCTCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 78376846 78376845 78376922 15853481 15853480 15853557 77 TCCTCTTCAAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAGTCAGGAATAAAGAAA ...x.:...............x..xx.x.....:x..:...x..x:.x.:...:x.:x:...xx..:..x....... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -57085000 -37145402 +3078 chr4 + 190214555 21291851 21291850 21291945 95 CTCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAG chr4 - 94230402 36858283 36858282 36858377 57372026 57372025 57372120 95 CTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..x.x..x.x:.:...x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::...:...... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -15566432 -78663970 +3050 chr4 + 190214555 21291858 21291857 21291940 83 AAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .:...x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::......... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -15566436 -78663966 +3229 chr4 + 190214555 21291861 21291860 21291954 94 AAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAAAAAAAGAAAAAAGTC chr4 - 94230402 36858285 36858284 36858379 57372024 57372023 57372118 95 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCC ..x..x.x:.....x.:xx..x.....x...::...:.........:.x..x.:x-....::....:..:::x.:.:.x..:...::......:. 55M1I39M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% -15566424 -78663978 +3009 chr4 + 190214555 21298498 21298497 21298554 57 TCTTATGTTGAATTTCCTCCTTTCTCCAATCACCAGCCCTTCTCTGCCCCATCTATT chr4 - 94230402 9767374 9767373 9767430 84462973 84462972 84463029 57 TTTAATGACCAATTTGGTCCTCCCTCCACTCTCCAACCCCTTTCTGCCCCATCTATT .:.x...x:x.....xx....::.....x..x...:...:.:............... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 11531124 NA +14812 chr4 + 190214555 21303782 21303781 21304023 242 AAGTCACTAAAAA-GCACTCCCTTACCTTCTAAACCTGCTTCAATCAGCCCAAACTGTTCCAATAATTTAACAAAAAGCACAATGACGATCAGAACTGCTATCATTTCAAGCCCTTCCAAGTTCATGGTCAGCTAGGTCATGGTCCGACCACAGCCACTGAG--AAGTGCTCCTCTGCCTGGCTTTCTTTGTAAAGCCATTAAACTACATTAAGAAGGCTACTGCTGGAGAAAGGGGAGGAGGAG chr4 - 94230402 16775994 16775993 16776223 77454180 77454179 77454409 230 AAGCCACCAAAAAAGCACTCCCTTACCTTCTAAACCTGCTTCAATCAGCCCAAACTGTTCCAACACTTTCACAAAAAGCACAATCACGATCAAAACTGCTATCATTTCAAGCCCTTCCAAGTTCATGGTGAGTTAGGTCATGGTCTGAGCACAGCCACTGAGGAAAGTGCTCTCCCGCCCGGCTTTCCAGGCGAAGCCATCGCTCTAC---------------GCGGGGGTAGGGGGGAGCGGGG ...:...:.....-.................................................:.x...x..............x.......:....................................x..:............:..x.............--........::.:...:.......:xx.::.......::xx....---------------..x..:.x.:....::.x..:. 13M1I148M2I44M15D22M 195/227 85.9% 230/94230402 0.0% 18/227 7.9% 4527788 NA +3028 chr4 + 190214555 21304005 21304004 21304070 66 GGAGAAAGGGGAGGAGGAGAGCGTATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACA chr4 - 94230402 81290077 81290076 81290142 12940261 12940260 12940326 66 GAGGAAGAAGAAAGAAGAAAACGTATAGCAGAAAGAGAACGGGAGAGAGAGAAGTTGAGAGAGGTA .::...:::.:.:..:..:.:.....::x...:.....:x.:..........::xx.......::. 66M 43/66 65.2% 66/94230402 0.0% 0/66 0.0% -59986072 -34244330 +3978 chr4 + 190214555 21305290 21305289 21305414 125 GACTGCTGGGATCTCTT-ACTAGCTGTGTGACCTTAGGTAAGTTACTTAACATCTCAGTGTCTTAATGTCCTCATCTATGAAGAGAGGCATAATAGCACCTAGCTCATCACTCTGTTGAGGGAATT chr4 - 94230402 11947192 11947191 11947307 82283096 82283095 82283211 116 GACTTCTGAATTGTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG----ATTATAATACAATGCTAACC------TTGAAGGAACT ....x...::x.x..:.-....:................x...:......:x.x:.x.....::.:.x...:...x......:x.----..x...::..xxx...x.:.------....:....:. 17M1I67M4D20M6D11M 83/115 72.2% 116/94230402 0.0% 11/115 9.6% 9358098 NA +3505 chr4 + 190214555 21321885 21321884 21322006 122 GAAGGAGGGAGGAAGGGACAGAGGGAAGGAAGGAAGGAAAAAGGTGGGAAGGAGGGAGGGAGGGAGAGAGAAAAGGA---GGGAAAGAGAAATGGTGGAAGGGAAGGAAGAGAAGGAAAAAAGGA chr4 - 94230402 40465775 40465774 40465899 53764504 53764503 53764628 125 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGA .:..:.....x..x::..xx...::....x..::.:.x..::..x::x::.x:x...........:....:......---......:..x..x.x.x...:xx..:xx.:.:x.:x.x....:.. 77M3I45M 76/122 62.3% 125/94230402 0.0% 3/122 2.5% -19143890 -75086512 +3348 chr4 + 190214555 21322098 21322097 21322195 98 AAAAGAGGAAGGGAAGGAAGAAAGGAAGAAGGAAGGAAGGAGGGAGGGAGGGACAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATGA chr4 - 94230402 60249477 60249476 60249573 33980830 33980829 33980926 97 AAAAAATGAGGTGAAGTGAACCTGAATGGGGATAGGAAAGGGAG-GGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGA ....:.x..:.x....x:.:xxx.:.x.::.:x.....:.:.:.-....:.x.......:......x......x:...xx.....x:...x:...x.. 44M1D53M 65/97 67.0% 97/94230402 0.0% 1/97 1.0% -38927379 -55303023 +3100 chr4 + 190214555 21322101 21322100 21322182 82 AGAGGAAGGGAAGGAAGAAAGGAAGAAGGAAGGAAGGAGGGAGGGAGGGACAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 36691892 36691891 36691973 57538430 57538429 57538511 82 AGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA ..::.:.....:....x.........:::..x:.x:.::...:.......xx....:.:::..:.x.:x..:xx..:.::.. 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% -15369791 -78860611 +3781 chr4 + 190214555 21370786 21370785 21370873 88 AGGTCATGGATTGAAATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395783 8395782 8395862 85834541 85834540 85834620 80 AGGCCATG--------TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:....--------.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x..... 8M8D72M 60/80 75.0% 80/94230402 0.0% 8/80 10.0% 12975003 NA +3050 chr4 + 190214555 21370796 21370795 21370860 65 TTGAAATATATATATATATATATATATATATATATATATATATATATATATATATACACACACAC chr4 - 94230402 84339172 84339171 84339236 9891167 9891166 9891231 65 TTGAATTATTGATAGAAATGATCATGGATATACATATATAGGTATATAGATATATAAACACACAC .....x...xx...x.x..:xx:..:x.....:.......x:......x.......x........ 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -62968376 -31262026 +3130 chr4 + 190214555 21370799 21370798 21370882 84 AAATATATATATATA---------TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACAC chr4 - 94230402 14964792 14964791 14964884 79265519 79265518 79265611 93 AAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.::..x......---------.:x.:.:.x....:.x.:::.:.::.:.::.:...:..:.:...xx........::............. 15M9I69M 56/84 66.7% 93/94230402 0.0% 9/84 10.7% 6406007 NA +3808 chr4 + 190214555 21370801 21370800 21370875 75 ATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 12975013 NA +3068 chr4 + 190214555 21370802 21370801 21370872 71 TATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 6405988 NA +3397 chr4 + 190214555 21370802 21370801 21370869 68 TATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 12975007 NA +3588 chr4 + 190214555 21370802 21370801 21370871 70 TATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 12975009 NA +3199 chr4 + 190214555 21370804 21370803 21370874 71 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 6405990 NA +3741 chr4 + 190214555 21370805 21370804 21370883 79 ATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:.:xx.:.................x.....x.:. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 12975017 NA +3188 chr4 + 190214555 21370806 21370805 21370876 71 TATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 6405992 NA +3872 chr4 + 190214555 21370807 21370806 21370885 79 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACGTG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..:.:.:...:.:.::...x.:..:...x..:....:...::x....:xx.:.................x.....x:.. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 12975019 NA +3319 chr4 + 190214555 21370808 21370807 21370878 71 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx........::............. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 6405994 NA +3619 chr4 + 190214555 21370809 21370808 21370887 79 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACGTGTG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..:.:.:...:.:.::...x.:..:...x..:....:...::x:...:xx.:.................x....:x:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 12975021 NA +3197 chr4 + 190214555 21370810 21370809 21370880 71 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:....:...xx........::............. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 6405996 NA +3095 chr4 + 190214555 21370816 21370815 21370866 51 TATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -66776364 -27454038 +3067 chr4 + 190214555 21370820 21370819 21370887 68 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACGTGTG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xxx:......:......x.:.....::x...::::.x..:.....:::.....:..:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -26796218 -67434184 +3446 chr4 + 190214555 21370852 21370851 21370904 53 CACACACACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 49987094 49987093 49987146 44243257 44243256 44243309 53 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatat ..:.:.:.....x..............::::..........x.....:.:... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -28616242 -65614160 +3639 chr4 + 190214555 21370854 21370853 21370904 51 CACACACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 49987094 49987093 49987144 44243259 44243258 44243309 51 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatat ..:.:.:.....x..............::............x.....:... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% -28616240 -65614162 +3832 chr4 + 190214555 21370856 21370855 21370904 49 CACACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 49987094 49987093 49987142 44243261 44243260 44243309 49 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtat ..:.:.:.....x............................x....... 49M 44/49 89.8% 49/94230402 0.0% 0/49 0.0% -28616238 -65614164 +3266 chr4 + 190214555 21370858 21370857 21370904 47 CACACACACACACACACACACACACGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 49987094 49987093 49987140 44243263 44243262 44243309 47 CATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGt ..:.:.:.....x............::..............x...:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -28616236 -65614166 +11499 chr4 + 190214555 21377009 21377008 21377393 385 TTTTTTTTCCTTTTTTCTTTATTTTCAGTAAGGAATTAAA----TTAGAAAAATCATTTGCATTTTTACATTTGTCTTCTCTGAATATGCAGGGCTGGTTGAATTCTGTCTGACACCTTCACAGAACTCGCTTAAGTAAGCTTTCCATTACTAAATAAATTGCATCCATTCTAATTAAAGATATGTAGAGCATA--CTACTCGGACAGGAGAAGCAAAGTGC-TATGAAGAGCTAGAGCTTCCATGGTAACCCTGCTAGGGATAATATAATTGATTCAAATGGTCTCTCCTGCCACATACTGATTCCATGCCAACAAGCCTTGAAAACTGTCCATCATTTCACAGAGCTAGTTATAGACCAAGTCCAGCTAAGACAAATAAATGGTGATAGA chr4 - 94230402 16792531 16792530 16792915 77437488 77437487 77437872 385 ttttttttgtttgtttgtttgtttgtttttttgCCTTGAAGACCTTGACAGAGGTACCTGCATTCTCCTATTATATTTTAGGGAATATACACAGCTACCTAAATCATGTCTGACAGCTTCAGTTAACATGGGCAGGTAGATTTTACACTATGAAATACACTTCATCCATAACAATTAAAG---TGTACTGCATAAGTTATGTGACCAAGAGAGACAAAAGGAGTATAAAGAGTTAAAGCTTCCATGGTAACCTGGGCAGTGAGGATGCAATTGGCTTGCGCGGTCCCTGCTGTCATGTCTTGATTCCATGCCAACAAATCATG--AACTGTCCATCATTTCACACATCTATTTTTAGAGCATCCTTAGCTGCTACCAATAAA--ATGATAAA ........x:..x...x...:...x:xx.xxx.xx..:..----..::x.:.:x:.::......:.:x:...xxx:..:xxx......:..x:...:x:.:...:x.........x.....xxx...x:.xx:.:...:::...x..:..:x.....x.:.x.......xx:........---....xx.....--:..:x:.:x..:....::....:x.x-...:.....:..:................:x.x:..x..x:..::.....::.::x::....:..x...:..::.x:.................::.x..--...................x.x...x..x....x..xx:::....:xx..x......--:.....:. 40M4I136M3D11M2I26M1I100M2D57M2D8M 251/378 66.4% 385/94230402 0.0% 14/378 3.7% 4584478 NA +15682 chr4 + 190214555 21392698 21392697 21393187 490 TAGACTAACAAACTCAAAACAAAGGCTGACAAAGA-GAGTCATCTGAAATTCTCATTATTAACTTACAACATTTGCATAAATTTGAACAGAGATGGATGGCTTTAAATGACGGTCACTAATTAAGAGACCGAAACAAACAAAAGACTAACAAAACATTATGTACAAAGACAAGCACATTAGCATATTCTATCTCATATCTCCCTTAAAATGACATGAAGACAAATATTCCTGATTACACCTGAAGCAATAATGTAACTAAGGCAATAAATCACTTGAAGAAACCTAAGGGGGC------TTCTTTTTAAACACATTGATTTGGGTATTAGGACTGTCACTGAAATATA----AACATAAAATGGAATCAAATTTGTTGTGATGATGTA-TCACTGAAACGTTTGCCT---------------------CTTTCCTGGAAAAATTTAATCAGTAGGTGGACATGTGACTATAACCCAGATGTAT-TTGTTTAAAAAGACTGCCAGATTATTAGAAAACTCTCTTT chr4 - 94230402 16796010 16796009 16796525 77433878 77433877 77434393 516 TAGAAAAATATTTTCTTGATAAAAATGGATAAACATGACCCAGTTGATGCTATCGTTAATAATTAGGAATATTTGCATAAATGTGAGCAAAGATGGATGACTTTAAACAACGGTCACTAATTAAGAGACTGAAAGAAACAAAGGACTAATAACATCTTATAAACCAAGATAGGCATATTAGTATACCGTATCTCATATCACTGCGGTAATGTCAGAAAGACAAATAGTGCTGATTACACCCAAAGCAATGCTATAACTAATGCCATCAGTCACAGCAAGGGACTTTTGCTTGCTGTTCATTTCTTATATAAGCTCTGTTTTTTAAATTAGGTCTGTTACTGAAATATATGTGTGTATGAAAATGAATAAAATCTGTTGTAATAATATGCTAACTGAAGGATCTCCATGCAAGTGAATTATTAGTCGTCACTTCCTAAAACTAGCTAATCATTATGCAGACTTCAGTCT--------GAGGCATATTGTTAGAAGAGAATAGCAGATCGTTAGAATAGTCTGTTT ....xx..:.xx:..xx:.:...:::x..:...x.-..x:..x:...x::.x..:...x...:.x:x..:............x...:..:.........:.......::....................:....x.......:......:..x.:x....:x..x....:.:...:.....:...::x...........x.:x:x:x....x..x:..........x.x...........::.......:x.:.......x..x..x.:....xxx...::..:.xx.xxx..------..::..x..x.x:.x:..x...xx:x......x....:...........----x::..:...xx....x....:......:..:..:.:-.x......:x:.:.x.x.---------------------x:.....::..xx.x:......x..x.::...x.xx.x..--------..x.:..-.....x:..:...x.:x.....::......x.x...x... 35M1I257M6I49M4I36M1I18M21I40M8D7M1I40M 333/482 69.1% 516/94230402 0.0% 42/482 8.7% 4596688 NA +11337 chr4 + 190214555 21416398 21416397 21416655 258 CTCCTTCTGCAGGCCTGCTGCCTGTGATTGATAGCTATTAAATTAGGTTTTACCTCCCCAGATTGGTCCAGATTAAATACACTTATAGCACAGCAAGCCACTGAG-AACAAAGGAACAAGTGGCAATTACTTTGTCTATTTTGGTCTTCTTCATAGTTAACCATCATTTAAGCATTCAAAGGAAAATGG----------------TTGGAAGACAGGAACGAAAGGAAAATGAATGAAATGAGAAT---TAAACACATTTCATTGTAAGTTCCTCAAA chr4 - 94230402 16801079 16801078 16801354 77429049 77429048 77429324 276 CCTTTCTTGGAGGCTTCCTACCTCTGATTGATAGCTATTAAATTAGGTTTTACTCCCTTGGTTCTGTCCAGATTAAATACATTTATAGCACAGCGTGACACAATGCGACAAAGGAAAAAGTGTCAATTACTTTCTCTATTTTTGTCTCCTTCACAGTTAACCATCATTTAAACACTGAAAAGAGGGTAAACAGACCTGTGTAAATTTGGAAGAAAAAAAAAAAAAGCAAACAAA--GAATAGGATTGGGCAAACAAACTTGCAAACAAATTTCTTAGA .:::.::..x....:.x..:...x.............................::..:::.x.:x................:............:x.x...x:x.-:.........x.....x..........x........x....:.....:.................:..:.x...:..:::.::----------------........x.::..x:...:.x...::..--:...::..x.---:.....x.:..xxxx::..:..:..:.:. 105M1I83M16I29M2D10M3I29M 189/256 73.8% 276/94230402 0.0% 22/256 8.6% 4615319 NA +3237 chr4 + 190214555 21422276 21422275 21422347 72 CTGCAACCTCCGCCTCCTGGGTTCAAGCCATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...........:xx...x.xx.x...:....::::...........:....x.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 3225150 NA +15134 chr4 + 190214555 21440325 21440324 21440706 382 ACAGAAGTACAGATCAATACTCCTAATGCAGAAACCATTTCAGGAAGTATCAAAAGCTATCAATTGTCATCTAATTGGAAGATTGTTTTTCTAAGTGAACAGCTATAAAATTCTGACTGTTCAAATCACTGTAATCATTTTATTTGCCCTATTCTCTAGAGGAACCTTAAACAAACCCTGCAGTGATTGCTTTGTTATTTCAAATCAGCCTAGTAATTTTCCAGTGTATTAAAAGACATTCAGTGTTGACACTGCTAGGAAAAAAATTGGGCGTCCGCCGGATGGAACTGTTCAT---TTTCAGTCAACATAATTACTCTGTATTAACACATCTGCTATTTAAAC-ATATCACACTTTTTTGCTA----ATAATTAACTTGATGGGATCA chr4 - 94230402 16803480 16803479 16803862 77426541 77426540 77426923 383 ACAGATACATGAATCAATAC-ACTAATGCTGAAACAATTTCA--AAGTATCAAAAGCTGCTAATTAATAGTTAAATATGAGCTTATTTTTCATGTGAAACCACTGCACTGTATTCATTGTTGAAATAATGGTAATCATTTTCTTTGTGACATTCTCTTGAGGAACTTTAAACAAAGCCTTCAGTAATTGCTTAGTTATTTCAGACTTGCCTAGTAATTTTCCACTGTATTAAAAGGCATTTATTTCTGAGGGTGATGGAAAAAATCAT----GTCTGCTGGATGGAGCTTTTACTTTATTTCAGTCAACATAATTACCTTTTATTAACACACCTGGTATCTGAACAATAGCCTATTTTTTATTTATTTGACAAATACCTCCATAGGTTCA .....x::.:::........-x.......x.....x......--..............:::....:x:.x:...x.:x:..x..:......xx:xx:...x:..::.xx:.x:.x.:....x....x.:x...........x....:xx:.......x.......:.........x...x....:.......x.........:.::x................x...........:....:.x.x:...x:x..x.:.:.....xxx.----...:..:.......:..x..xx.---...................::.x..........:...x...:.:...-...x.x:.:.....xx:..----.:..x..x..:x..:..x... 20M1D21M2D224M4D23M3I47M1I19M4I21M 274/375 73.1% 383/94230402 0.0% 15/375 4.0% 4636845 NA +4208 chr4 + 190214555 21491450 21491449 21491520 71 CTGCAGCCTTGGTCTTCTGGGTTCAAGTGATCCTTCTGCCTCAGCCTCTCAAGTAGCTGGAACTACAAGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.....:x::x................x.:.x:xx.x........:...................x... 71M 56/71 78.9% 71/94230402 0.0% 0/71 0.0% 3294324 NA +3249 chr4 + 190214555 21504443 21504442 21504534 92 GGGCAATAGAATGAC---TCCAACTCAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGCAAGCAAGCAA chr4 - 94230402 5304396 5304395 5304490 88925913 88925912 88926007 95 GAGTAATGGAACAACACCTCCCACACTGGGAAAAAAAAAAAAAAAATGCAAGAAAGGCAGAAAGTATGAAAAACAATCAAATAGCAGCCAAGCAA .:.:...:...::..---...x..x.x:::.........:...:..x.x.......:x......x.x.:..::x.:xx.:.x....:x....... 15M3I77M 62/92 67.4% 95/94230402 0.0% 3/92 3.3% 16200047 NA +3127 chr4 + 190214555 21504447 21504446 21504520 74 AATAGAATGACTCCAACTCAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGA chr4 - 94230402 44177677 44177676 44177750 50052653 50052652 50052726 74 AATGGAATATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGATGA ...:....:x:.......:.............:.:.:..:::.x:...:x:x:.:..:.:.::...:.x..x.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -22673230 -71557172 +3242 chr4 + 190214555 21511996 21511995 21512078 83 GAAGGAAGTAAGGAGTAGGGAAAGAGGGAGGAAGAGAAGGAAGGAGGGAAGGAAAAAGAATGAAGGAAGGAAGGAAGGAAAGA chr4 - 94230402 36691893 36691892 36691973 57538430 57538429 57538510 81 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAA--AAAGTAACAAATCAGAAGAGA .:....:.x.:...:..::.:.....::.:x..x..:............:x...:.....--..:.x.:x..:xx..:.:... 60M2D21M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% -15179897 -79050505 +3272 chr4 + 190214555 21519318 21519317 21519394 77 ACAGAAATAATAGGAGAGAGAGAGATACACACACACACACACACACACACACACACGTATATGTATGTGTATATATA chr4 - 94230402 87372717 87372716 87372792 6857611 6857610 6857686 76 ACAGACTAGATAAGAGAAAAAAAT-TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA .....xxx:...:....:.:.:.x-..:x:x..x...........x.........:x....:......:::...... 24M1D52M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% -65853399 -28377003 +3027 chr4 + 190214555 21519322 21519321 21519391 70 AAATAATAGGAGAGAGAGAGATACACACACACACACACACACACACACACACGTATATGTATGTGTATAT chr4 - 94230402 87372724 87372723 87372793 6857610 6857609 6857679 70 AGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT .:....x..:.:.:.:xx.xx.x..x...........x.........:x:.::::......:..:..... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -65853402 -28377000 +3070 chr4 + 190214555 21519336 21519335 21519425 90 AGAGAGATACACACACACACACACACACACACACACACGTATATGTATGTGTATATATACATATGTGTGTATATGTATGTGTATATATAC chr4 - 94230402 4417347 4417346 4417436 89812967 89812966 89813056 90 AGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC ...x.x...:.............x:x...:..:..::x.x:.x..:.::.....xx.x:...x.:x:.:..:.::...x.:.x.....:. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 17101989 NA +3014 chr4 + 190214555 21519411 21519410 21519492 82 TATGTGTATATATACACATATGTGTGTATATGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATG chr4 - 94230402 17853465 17853464 17853546 76376857 76376856 76376938 82 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG ...x...x.....:.........:.::.:.x...xx.x.:...:..:.:....:.x.x..::.....:x.x.x::.:::... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 3665946 NA +3032 chr4 + 190214555 21519501 21519500 21519582 82 TGTATGTGTATATACACATATGTGTGTATGTGTATGTGTATATACACATATGTGTGTATGTGTATATATACACATATGTGTG chr4 - 94230402 17853465 17853464 17853546 76376857 76376856 76376938 82 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG .:.x...x.....:.........:.::.::x...xx.x.:...:..:.:....:.x.x..::...:..x.x.x:....::.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 3666036 NA +3151 chr4 + 190214555 21519509 21519508 21519699 191 TATATACACATATGTGTGTATGTGTATGTGTA-----TATACACATATGTGTGTATGTGTATATATACACATATGTGTGTGTATGTATGTGTATATATACACATATGTGTGTGTATGTATGTGTATATACACAAATGTGTGTGTATGTATGTGTATATATACACGT------GTGTGTATGTATGTGTATATACACACGTGT chr4 - 94230402 40224604 40224603 40224793 54005610 54005609 54005799 190 TAAACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA---------ATATAATTTGTTGATTCTGCATTCAT---TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGT ..x.:.....x.:xx.:::....:..x:xx..-----......:..:.:xx.x.x....:.xxx:x...x..x.x.......:...:.:..........x.:.:..:.....x:.---------.....xx:x:x..xx.x..:..x:..---..:.:.:.:.x..------:...xxx...x.:.:.:.x.......:... 32M5I78M9D26M3D13M6I30M 113/179 63.1% 190/94230402 0.0% 23/179 12.8% -18705095 -75525307 +3577 chr4 + 190214555 21519755 21519754 21519826 72 GTATGTATGTGTGTATACACACGTGTGTGTATGTGTGTGTATACACGTGTGTGTATGTGTGTGTATACACAC chr4 - 94230402 39267142 39267141 39267213 54963190 54963189 54963261 72 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAAAC ....:x..........:x:.:.::...xx.:............:.x.....::.x...:..x:......x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -17747387 -76483015 +3216 chr4 + 190214555 21519811 21519810 21519868 58 GTGTGTGTATACACACGTGTGTGTATGTGTGTGTATATATTTATATATTTATTTATAT chr4 - 94230402 57691393 57691392 57691450 36538953 36538952 36539010 58 GTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATAT ..:x...:.....::.x..........:x.....:.:..:x.x....:.......... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -36171582 -58058820 +3039 chr4 + 190214555 21519813 21519812 21519859 47 GTGTGTATACACACGTGTGTGTATGTGTGTGTATATATTTATATATT chr4 - 94230402 48089502 48089501 48089548 46140855 46140854 46140901 47 GTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATT ..x......:.................x.x..:.:.:.x........ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -26569689 -67660713 +3236 chr4 + 190214555 21519819 21519818 21519920 102 ATACACACGTGTGTGTATGTGTGTGTATATATTTATATATTTATTTATATATATAAATTATATATAATTTAATTATATATTAATTTTATATGTAT--AGTTAAG chr4 - 94230402 52573784 52573783 52573887 41656516 41656515 41656619 104 ATACATATATATACGTGTGTGAGTATTCTCATTGATTTATGTGGTTACATATATAAAATATTCATACTTTAATAGAAAATAAAACCGGTCTGTATTGAGTTAAG .....:.::.:.::..:....x..:.x:x:...x..x...x.:x...:.........x...x:...x......x:x.x..x..x::x:.x.....--....... 95M2I7M 68/102 66.7% 104/94230402 0.0% 2/102 2.0% -31053965 -63176437 +3910 chr4 + 190214555 21528663 21528662 21528795 133 TCTCATAAAAAACAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAG chr4 - 94230402 30533157 30533156 30533286 63697117 63697116 63697246 130 TCTTCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG ...:x.x...x.x....:..........::.:.::...:.:.:.xx:x....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....---..:.....x.... 117M3D13M 82/130 63.1% 130/94230402 0.0% 3/130 2.3% -9004494 -85225908 +3302 chr4 + 190214555 21528667 21528666 21528752 86 ATAAAAAACAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858291 36858290 36858376 57372027 57372026 57372112 86 ATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..:.:.....:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% -15329624 -78900778 +3083 chr4 + 190214555 21528669 21528668 21528768 100 AAAAAACAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858277 36858276 36858376 57372027 57372026 57372126 100 AAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ...x.x.x..x..x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% -15329608 -78900794 +3213 chr4 + 190214555 21528673 21528672 21528764 92 AACAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858285 36858284 36858376 57372027 57372026 57372118 92 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% -15329612 -78900790 +3057 chr4 + 190214555 21528678 21528677 21528760 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -15329616 -78900786 +3057 chr4 + 190214555 21528690 21528689 21528772 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -15329604 -78900798 +3057 chr4 + 190214555 21528694 21528693 21528776 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -15329600 -78900802 +3006 chr4 + 190214555 21528714 21528713 21528794 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGAAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x...:.x..:::...... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -15329580 -78900822 +3137 chr4 + 190214555 21528722 21528721 21528802 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGAAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::.....:..x...:.x..:::...... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -15329572 -78900830 +3146 chr4 + 190214555 21528730 21528729 21528810 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.::::.....:..x...:.x..:::...:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -15329564 -78900838 +3013 chr4 + 190214555 21528738 21528737 21528818 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.::::.....:..x...:.x:.:::...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -15329556 -78900846 +3876 chr4 + 190214555 21531270 21531269 21531486 217 GTGCCTTCCTTCCTTTCCTTCTTTCTCTCTCTCTCTTTTCTTCCTTCCTTCCTTCCTCCCTC----CCTCCCTTCCCCTCCCCCTCCCTCCCTCCCTCC---------------CTCCCTTCCTTCCTTCCTTTTTCTTTCTTTCTTGACAGTCTCTCTCT-GTTGCCCAGGCTGGAGTGCAGTGGCACAGTCACAGCTCACTGCAACCTCCACC---TCCTGGGTTTAAACAATTCTCC chr4 - 94230402 61964777 61964776 61965011 32265392 32265391 32265626 235 GTTTCTCTATTATTTTCCTTCTTCC---CTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCCAGAAGGCCAGGCAGTGGGGGAGCGCTGCA--CACAGCTGGTCCCCAGCTCCCCCGAGCCCTGGCCATCAAAGCTTCTCC ..x:..::x..x:..........:.---...:....::...:.::..:..:......:..x.----.x.x.x...:...:....xxx.....:.....x---------------....::...x.x..:...x:x..:::.:..x.:x.xx::.x.:...:-.xx.x......x.x:.x.x..:.x::..--.......x:::x.x.x....x..---:.....x:x.x..x:x...... 25M3D34M4I33M15I47M1I28M2D23M3I22M 134/212 63.2% 235/94230402 0.0% 28/212 13.2% -40433507 -53796895 +3039 chr4 + 190214555 21538007 21538006 21538065 59 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGGGAAATTTGGAGATGGAGAT chr4 - 94230402 6438506 6438505 6438558 87791845 87791844 87791897 53 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAG------GGAGATGGAGAT ....:.....:.....::............::..:x.:.:.------............ 41M6D12M 43/53 81.1% 53/94230402 0.0% 6/53 11.3% 15099501 NA +3099 chr4 + 190214555 21541178 21541177 21541253 76 AACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGAAAAAATT---ACAGAGATCC--TAAGACATCTCTCATCCACT chr4 - 94230402 94076895 94076894 94076975 153428 153427 153508 81 AACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAAGCCAGGCAAACATTTGATAAGGTATTTCTTCTCCCCT .....x..x.........:..................:..xx..x:---:..:.x..::--....::..:...:x...x.. 46M3I10M2I20M 57/76 75.0% 81/94230402 0.0% 5/76 6.6% -72535717 -21694685 +3248 chr4 + 190214555 21541180 21541179 21541222 43 CAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGAAAAAAT chr4 - 94230402 87676346 87676345 87676388 6554015 6554014 6554057 43 CAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAAT ................:.................xx..x.... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -66135166 -28095236 +3305 chr4 + 190214555 21541182 21541181 21541227 46 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGAAAAAATTACAG chr4 - 94230402 76845959 76845958 76846004 17384399 17384398 17384444 46 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAATGTCAG ................................:x..x....xx... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% -55304777 -38925625 +3095 chr4 + 190214555 21541183 21541182 21541218 36 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGAAA chr4 - 94230402 25247412 25247411 25247447 68982956 68982955 68982991 36 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAA ...........................:....:... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -3706229 -90524173 +3215 chr4 + 190214555 21541187 21541186 21541230 44 AAAAAAAAAAAGAGAGAGAGAGAGAGATGAAAAAATTACAGAGA chr4 - 94230402 31212053 31212052 31212096 63018307 63018306 63018350 44 AAAAAAAAAAAGAGAGAGAGAGAGAAATGAAAAAAGTTGAGGGA .........................:.........x.xx..:.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -9670866 -84559536 +3083 chr4 + 190214555 21544250 21544249 21544319 70 TCTCTCTCTCTCTCTCTCTCTCACACACACACACAAACACATACATA--------AAAAATTTAAGACATTGTATTAA chr4 - 94230402 51342067 51342066 51342143 42888260 42888259 42888336 77 TCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC-CATATCCTATTTCAAAATCTGTAATATGGAATTAA .....x.........................xx.....x..:-....--------x.....:.:x:.:..x.x..... 42M1D4M8I23M 56/69 81.2% 77/94230402 0.0% 9/69 13.0% -29797817 -64432585 +3097 chr4 + 190214555 21552008 21552007 21552076 69 AAGATTGAAAAAACAAGGGAGAGCTTTTTTTAAAAAAAAAAAAAACAAAAAACAACAACAAAAAAAAAC chr4 - 94230402 47491670 47491669 47491738 46738665 46738664 46738733 69 AAAGCTCGACAAACAAAAGGCTGTTGCTATTAAAAAAAAAAAAAGCAACAAACAACTATATAAAAAAAC ..:::.x:.x......::.:xx.:.x:.x...............:...x.......x.:.x........ 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -25939662 -68290740 +3098 chr4 + 190214555 21552028 21552027 21552079 52 GAGCTTTTTTTAAAAAAAAAAAAAACAAAAAACAACAACAAAAAAAAACCTT chr4 - 94230402 16619850 16619849 16619901 77610502 77610501 77610553 52 GAGCTCAAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCT .....:xxx.x.......x..........x..................x.:. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 4932178 NA +3629 chr4 + 190214555 21575490 21575489 21575575 86 CCTTCTCCTTATCTTTTCCTTCCCCTCCCCTTCTTCCTCTTTTCTCTTCCTCCTCTTCCTT--TTCTTTCTTTAGCTAACTTCTTAGT chr4 - 94230402 20485614 20485613 20485701 73744702 73744701 73744789 88 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTTAAT .:.x..::::.:.::.x..::x...:....:.:....:..........:.:...:.:....--..:..:........x.:x::...:. 61M2I25M 57/86 66.3% 88/94230402 0.0% 2/86 2.3% 1089876 NA +6197 chr4 + 190214555 21580899 21580898 21581207 309 TTGTAAGGATATGTCAGCCTATTCAGAGAACAAATGACCCAAGTCAATGAGTGTGCTGAG-AGCTTATCCAGGAGAGCTGACACTCAACTTAAGCTAAACTTATAAA------CTGTAGTGCATGTTCAATTTA--TTTTATCTTCTGCATTTCACTCTGTCACTCCACTTGATGACATTAAGTATAGCCTTGCAAAGGAAATAGTATCTATTTCTGAAAGGTTTAGGTGAAACATCATTATATTTCCATTTCTGAAAGGTTTAGGTGAAACATCATTATATTTCCAAACAAAATGAAAACAAGCACCTTGGTAGAGG chr4 - 94230402 16848368 16848367 16848654 77381749 77381748 77382035 287 TTTTAAGAAAGTGCCAGTCATCTTAGAGAA----TGACTCAATCCACTGAACAAGGTTATTAGTTTAACAGCTAAAGCTGACATTTT-CTCAAGTTGAATTTATATAGTATGTCTACAATACATTTTCAATTTACTTTTTATCTAATGCATTACACTCTGTCACTGTACTTGCAGACATATAATATAAACCTATGGAGTGAATCAAGTCT------------TATAAGTA---------TATTTTTCCAAGCC--AAGAATTTAGGTGGAA---AATGAAGCCTTCAAATAAAGTGGAAACATTTATTTTTGCAGAAG ..x....:.x:..:...:.xx:.:......----....:...x:..x...:::x.x.x.x-..:...x.x:xx.:........:.:x-..:...:.:..:.....x.------..::.:.:...x.........--........xx......x............x:.....xx.....xx.:....:x.:.::::..x:...x:x:...------------.x..:..:---------...x......xx:.--..:::........:..---x..x.x:::.:....:...:..:.....xx:.::..x.:...:. 30M4D26M1I26M1D19M6I21M2I74M12D8M9D14M2D16M3D44M 185/278 66.5% 287/94230402 0.0% 40/278 14.4% 4732531 NA +3179 chr4 + 190214555 21589173 21589172 21589296 124 TATATATATATATATATATATATATATATGTGTACATATATAAGTACACATGTATCTATACAGATACATATATACATATATGTATCTATACAGATACATATATGTATAGATACATATATATGTG chr4 - 94230402 12802786 12802785 12802903 81427500 81427499 81427617 118 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA-----ATTCTTTTATGGATGGAT-TTTATGGATGTG ......:x:..xx...:...x....:.:::..x.:....x......:.:.:....:x.x.x..x.x:::.:..:..x...::...x..-----..x.x.x....x..:...-:x...:x..... 88M5D18M1D12M 77/118 65.3% 118/94230402 0.0% 6/118 5.1% 8786387 NA +3109 chr4 + 190214555 21589304 21589303 21589377 74 ACATATATACATGTACATATACACGTGTATATATATACATGTGTATGTATATATGTACATATATATATACATGT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x..::.:....:.:...:....:::x.....:...:x.x......:..:.:.x.:...:.:x....:::... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -50040828 -44189574 +3020 chr4 + 190214555 21593088 21593087 21593170 83 TCTGCAATTTAAATAATGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTAACAGAGTGAAAAAAAAAA chr4 - 94230402 32272566 32272565 32272641 61957762 61957761 61957837 76 TCTGCATCTGCAACAACGCTT-------TATTTTTGTGTGTGTGTGTGTCTGTGGAAGCCTCATAATAGAAAGAGAAAAAAAA ......x:.xx..:..:.:x.-------.:...x...............x....x:x.::..x...:...:x..:........ 21M7D55M 55/76 72.4% 76/94230402 0.0% 7/76 9.2% -10679478 -83550924 +3020 chr4 + 190214555 21611613 21611612 21611672 60 CTCTTCACCTGGTTTAAGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTT chr4 - 94230402 66440483 66440482 66440542 27789861 27789860 27789920 60 CTCTTTTACTATACTAAAGTCTTTTTGTTTGATTGATTATTTGTTGTTGTTGTTGCTTTT .....:xx..:xx:...:..:..........x...x..:......x.....x...:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -44828870 -49401532 +3022 chr4 + 190214555 21629811 21629810 21629863 53 TTGATGTCAGAAAACCATATTTCCTTTTCTTTTTCTTTCTTTTTTTTTTTTTT chr4 - 94230402 54687369 54687368 54687421 39542982 39542981 39543034 53 TTGATTTCAAAAGAGCATAGTTCCTTTTTTTTTTTTTTTTTCTCTCCTTTCTT .....x...:..:.x....x........:.....:...:..:.:.::...:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -33057558 -61172844 +3328 chr4 + 190214555 21690091 21690090 21690158 68 TATATATGTATATATATACATATATTATATATATATTTTATATTATATATATATATATACACACACAC chr4 - 94230402 9061430 9061429 9061497 85168906 85168905 85168973 68 TGTGCATGTTTATATATTACCATATACTGTATATATTTTATACGGTATGTATATTTATATATACACAC .:.::....x.......xxx:....xx.:.............:x:...:.....x....:.:...... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 12628661 NA +3007 chr4 + 190214555 21694904 21694903 21694988 85 CACGATTGACCAAAAAAAAAAAAAAAATAAAAATAAATAAATAAATAAAGGGCTTTTTGGTAAAAAGAAAAAAAATCACCCAAGA chr4 - 94230402 58810614 58810613 58810698 35419705 35419704 35419789 85 CAGAATTAACAGAAAATATAAAGAACAAAAGACTGAGTTGATGATGATCTGGATATGTAGCAAAAAAAAAAAAAATCACCCAAGA ..x:...:..x:....x.x...:..x.x..:.x.:.:.x:..:.xx.xxx..x.x.x.:.:.....:.................. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% -37115710 -57114692 +3471 chr4 + 190214555 21714488 21714487 21714558 71 GAGATAGAGACAGGAGAGAAGGAAGAAAGAGGAAAGGAGAAGAGGAAGAAAGAGAGGGAGGAAGGGGGGGA chr4 - 94230402 47169709 47169708 47169776 47060627 47060626 47060694 68 GAGCTGGTGACAGCAGCT---GAAAAATGAGGAAAAGAGGAGAGGAGGAGGGAGAGGGAAGAAGGAAGGGA ...x.:.x.....x..xx---...:..x.......:...:......:..::........:.....::.... 18M3D50M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% -25455221 -68775181 +3145 chr4 + 190214555 21719971 21719970 21720112 142 AAAAAAAAAGAAGAAGAGGAAGAAGAAAAGAAAAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAAAAGAAGAAGAAGAAAAAAAAAACAGGGCTACTGCCAGT-TATTTAATACCTTTTCTATA chr4 - 94230402 67128401 67128400 67128543 27101860 27101859 27102002 143 AAAAACAAACAACAGCAGCAAACCAAAATGAAAAGCAAGAAGAAAAATAATTATTAAAAAGAAGGGGAGTGGGAGGAGGTAGGGAAGTAGAGAAAGTAGGAGCAACTAATATTAATGACAATCTATATAATCACTGTTTCCTA .....x...x..x.:x..x..:xx:...x.....:x........:..x:.xx.xx.:..:..:::....x:....:..:x::::...x...::...x.::.:x..x:.:x::..x..x..:.-...x....xx..x..::x.. 122M1I20M 84/142 59.2% 143/94230402 0.0% 1/142 0.7% -45408430 -48821972 +3183 chr4 + 190214555 21719988 21719987 21720068 81 GGAAGAAGAAAAGAAAAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAAAAGAAGAAGAAGAA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGG---AGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ..:::..:..........:.:...:..:....---...:.::..:.::..:..xxx.::..:x........x.:.::.... 32M3D46M 52/78 66.7% 78/94230402 0.0% 3/78 3.8% -18752554 -75477848 +3020 chr4 + 190214555 21756551 21756550 21756589 39 TCAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAATATC chr4 - 94230402 2114466 2114465 2114504 92115899 92115898 92115937 39 TCAAGAGAGAAAAAAAAAAGAGAGAGAGAGAGAAACACC ....:.:.:..........................:.:. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 19642085 NA +3300 chr4 + 190214555 21757091 21757090 21757283 193 GTCTCAAAA--------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----------------AGAAAGA----------AAGAAAGAAAG------AAAGAAGGAAGGAAGGAAGGAAGGAAGGAA-------GGAAGGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 56098307 56098306 56098548 38131855 38131854 38132096 242 GTCTCAAAATTCATTGCAGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA .........--------.:...x.::x..x....x..x:....:.:.x.:.::x..x....:.-----------------...:..:----------..::.......------.:..xx..:.::...xx:.:.::.xx..:.-------:.......-...:..xx.:....x.:...::...:....:..:.:x:.:..:::.:...:..:xx..:....xxx.....:...xx..x.. 9M8I46M17I7M10I11M6I30M7I8M1I82M 124/193 64.2% 242/94230402 0.0% 49/193 25.4% -34341216 -59889186 +3093 chr4 + 190214555 21757126 21757125 21757208 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x..xx.::::.::.:.:....x:.:::x...:.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -15101168 -79129234 +3868 chr4 + 190214555 21757172 21757171 21757313 142 AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAG----------------------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAAAAGAGAAAAGAA chr4 - 94230402 21758891 21758890 21759061 72471342 72471341 72471512 171 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ..:.:..xx..:....:...:..x....:....:..----------------------...x..:x.x.:...x.x:x..x..x.:.....-------......:..............:::.:...:.x...x:.:..:xxx...::...:xxx:x..:...:....x.. 36M22I33M7I73M 95/142 66.9% 171/94230402 0.0% 29/142 20.4% -1719 -94228683 +4075 chr4 + 190214555 21757176 21757175 21757322 147 AAGGAAGGAAGGAAGGAAGGAAG-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAAGAAAAGAAAAGA-AAAGAAAAGAAAAGAAAAGAAAAGA-------GAAAAGAAAAGAAAAGAGAAAAGAAAGAAAGAAA chr4 - 94230402 44053977 44053976 44054136 50176267 50176266 50176426 160 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ....:.x:x:x....:.x...:.-........::...:.::x......:x::.:.:.x::.----:.............:.x....:x:..x.-......x.....::.x..x:x..:.-------..x..:::......:....:x..x:...x..... 23M1I37M4I28M1I25M7I34M 98/147 66.7% 160/94230402 0.0% 13/147 8.8% -22296801 -71933601 +3181 chr4 + 190214555 21757192 21757191 21757281 90 AAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 31350830 31350829 31350918 62879485 62879484 62879573 89 AGGGAATGAAAGGA-TAACTAAAATACGGAAGAAAATACAACAGGAAGAATTGAAGAGGTGGAAGGAAAAGCAAGGAAAGGAAAATAAAA .:....x.....:.-x..xx...:x.x.:......:x.x:.x..:.....xx:....::x.:..:......x..:....:.....x.... 14M1D75M 61/89 68.5% 89/94230402 0.0% 1/89 1.1% -9593638 -84636764 +3275 chr4 + 190214555 21757195 21757194 21757295 101 GAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ...:..:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x......x.x.:::..x..x.:.....:.x.:...:.:...::... 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% -39577506 -54652896 +3138 chr4 + 190214555 21757206 21757205 21757286 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGA-AAAGAAAAGAAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx...:.:.:.:::.:..-.::..x............ 63M1I18M 56/81 69.1% 82/94230402 0.0% 1/81 1.2% -15101088 -79129314 +3170 chr4 + 190214555 21757210 21757209 21757292 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x.:x.:xx:..::..:...:.:::x.::..x.........:... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -15101084 -79129318 +3128 chr4 + 190214555 21757234 21757233 21757313 80 AGAAAGAA-AGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAAAAGAGAAAAGAA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA .......x-..:..:.........::........x::.x..:x.:..:.:..x.x...x:.:.x:..x...x.:....... 8M1I72M 56/80 70.0% 81/94230402 0.0% 1/80 1.2% -48496588 -45733814 +3138 chr4 + 190214555 21757244 21757243 21757346 103 AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAAAAGAGAAAAGAAAGAAAGAAACTATCATAAAATCATTCAGGATAC chr4 - 94230402 10985342 10985341 10985444 83244959 83244958 83245061 103 AATGAAATGGGGTATAGAAAACACGACAGGAGACAGAGAAAATGAAAAAAAAATAGGAAAAAAAAAAGGGAGGGAGGGTTCCCCATAAAATCAAGCAGCATAC ..x....x.:::x:x.:.:..x.x:.x..:.:.x.:.::...x..:....:..x..:...:.:.....::..::..::x::x:..........xx...x.... 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 10771902 NA +3996 chr4 + 190214555 21761177 21761176 21761265 89 CTATAGCCTCAAACTCCTGAGTTCAAGTGATCCACCTGCCACAGCTTCTCAAGTAGCTGGTACTACAAG---AC--CTATCTATAACCTTTTCA chr4 - 94230402 18197126 18197125 18197219 76033184 76033183 76033277 94 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCCTTTCA ...:....:x..:..:...:.........x.:...xx.x.x....:.:............x......x.---..--..:.x...x.:.:..... 69M3I2M2I18M 68/89 76.4% 94/94230402 0.0% 5/89 5.6% 3564051 NA +3206 chr4 + 190214555 21778179 21778178 21778271 93 TGTGTTTGTATGTTTTATTTTTATTTGTTTCTTTTTCCTTTTTTCCTTTTTTTTTTTCTTTTTTTTTTTTTTTTGAGACAGGGTTTCACTCTT chr4 - 94230402 70187577 70187576 70187656 24042747 24042746 24042826 80 TATGTTTGTATGATTT----CTGTTTGTCTCTTTTTCCTTGTTTTCTACCTTTTTTCTTTTACTACTTTTACTC---------TTTCACTCCT .:..........x...----:.:.....:...........x...:..x::......::...x:.x:....x:.:---------........:. 16M4D54M9D10M 60/80 75.0% 80/94230402 0.0% 13/80 16.2% -48409398 -45821004 +3134 chr4 + 190214555 21778193 21778192 21778261 69 TTATTTTTATTTGTTTCTTTTTCCTTTTTTCCTTTTTTTTTTTCTTTTTTTTTTTTTTTTGAGACAGGG chr4 - 94230402 89437694 89437693 89437762 4792641 4792640 4792709 69 TTACATTTATTTATTACCTTTCTCTTCTGTGTTGTTTTTTGTTGTTGTTTTTTTTTTTTCCCAACAGGG ...:x.......:..x.:...::...:.x.x:.x......x..x..x............:xx:...... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -67659501 -26570901 +3410 chr4 + 190214555 21798496 21798495 21798560 65 GAAAGCAAGACCCTGGGAAAAAAAAAAAAAAAAAAAAGGAAAGAGAGAGAGAGAAAGAGAGAAAG chr4 - 94230402 37322375 37322374 37322439 56907964 56907963 56908028 65 GAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGG .....x..::....x.xx.....:.............:..:.......:::x.:.:...::..:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -15523879 -78706523 +8441 chr4 + 190214555 21815755 21815754 21816003 249 AATGAGAAACTGAGTTCACAAAGTCTTTTATTCAGATCTCTCCAAGCCAGCATATTATCTTCTCCCCATTAAAGAGCTTTAGGCCATCTGTCCCATCTAGACTACCAGCTGGTATGAT-CTCCAGAAATAT-TCCTCAACTGTAGGA-ACTAATTGGGTTTTTCCATATGT-ATAAATTGTAGATTAACTGTATTTACCAATAAAAAAAGTTCAATTTCATCTTTGTGGCAGGTGACCTGATCTTAATAATGA chr4 - 94230402 16951363 16951362 16951607 77278796 77278795 77279040 245 AATGGGAAATAAAAATCACATGTTCATATATTCAGCTCTCTTTGCGCCAACACATTATCTTTATCCCATTAAAGAGCCTTATGCCATCTGTACCATCTGTGATACCAGCTGGTACATTGGTCCAAAAATATCTCTTCAATTATGGTATACTGATTAG--TTTCCAGTATATAATCAATTGCAGCTTAACTGAATT-----ATAAAAATAAATCCGTATTTTTTTCATAAC-TCTGATTTGATTCTGGTAATGA ....:....:x:.:x.....x:x..x.x.......x.....:::x....:..:........:x:.............:...x.........x......:x:x............::x.-x....:......-..:....:.:.:.x.-...:...:.--...:.x:...:.-..x.....:..x.......x...-----.......x.:x..x:.x.:x.:..::.::.-xx...::....::.::...... 118M1I12M1I15M1I9M2D12M1I23M5D30M1D22M 172/241 71.4% 245/94230402 0.0% 12/241 5.0% 4864392 NA +6255 chr4 + 190214555 21815770 21815769 21816003 234 TCACAAAGTCTTTTATTCAGATCTCTCCAAGCCAGCATATTATCTTCTCCCCATTAAAGAGCTTTAGGCCATCTGTCCCATCTAGACTACCAGCTGGTA---TGATCTCCAGAAATAT-TCCTCAACTGTAGGA-ACTAATTGGGTTTTTCCATATGT-ATAAATTGTAGATTAACTGTATTTACCAATAAAAAAAGTTCAATTTCATCTTTGTGGCAGGTGACCTGATCTTAATAATGA chr4 - 94230402 16953264 16953263 16953491 77276912 77276911 77277139 228 TTACAAAGCCCNNNNNNNNNNTCTCTTTGCGCCA-CACATTATCTTTATCCCATTAAAGAGCCTTATCCCACCTGTACCATCTGTGATACCAGCTGGTACATTGGTCCCC---AATATCTCTTCAATTATGGTATACTGATTAG--TTTCCAGTATATAATCAATTGCAGCTTAACTGAATT-----ATAAAAATAAATCCGTATTTTTTTCATAAC-TCTGATTTGATTCTGGTAATGA .:......:.:XXXXXXXXXX.....:::x....-..:........:x:.............:...xx...:....x......:x:x............---..:..:..---.....-..:....:.:.:.x.-...:...:.--...:.x:...:.-..x.....:..x.......x...-----.......x.:x..x:.x.:x.:..::.::.-xx...::....::.::...... 34M1D64M3I8M3D5M1I15M1I9M2D12M1I23M5D30M1D22M 154/212 72.6% 228/94230402 0.0% 18/222 8.1% 4862506 NA +7133 chr4 + 190214555 21819901 21819900 21820128 228 GAACTAAGATTTAATCTTAAATATTC--ATTAAATTTAGTGGCTTAAAATACTGGAGCAATGCCCAGATGGAAAGTGGCAAGATATTTAA--TTTGATATAGCTATCTAAATGTCCTCTGAGTACTTTTTAAAAAGCATTTTCATTAAAAATAATGAATTGTTTCACTCTATTAG--TTTGGGTTAGAAAGT--------TAAAAAAATAAAATAAGGCAGATACACTAAGAAAATATCAAA chr4 - 94230402 16958007 16958006 16958238 77272165 77272164 77272396 232 GAACTACCATTTAATCTGGAACACTCTCAATATATTTAGCCACTTAAATTGCTGGAATAATGCCCAGATGGAAAGTGGCGAGATATTTAAAGATTGATTCCATTCTCTAAGTATGCAATGAATAT------AAAAGTCCTTCCATTTAATCTAATACACTTTTTCAGCTTATTAGTTTTTGATTTATAGAATGCTTTAAATAAAAAAGCAGTCGTGGGCAGACAC----AAAAGAAATCAAA ......xx.........x:..:.:..--.x..x......:x:......x.:.....::.....................:..........--x.....x:x::.x.....:.:.x.xx...:..:------.....:x:..:....x..xx....:x.:.x.....x::......--....:x...x.:.:.--------.......::.:xxxx:......:..----.:..:.x...... 26M2I62M2I33M6D44M2I15M8I25M4D13M 157/218 72.0% 232/94230402 0.0% 24/218 11.0% 4861894 NA +3560 chr4 + 190214555 21820267 21820266 21820351 85 TTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATACATATATACACATACACACACACACA chr4 - 94230402 14964800 14964799 14964883 79265520 79265519 79265603 84 TTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ....:..x:x....-....x.:.:.x....:.x.:::.:.::.:.::.:...:........xx:.:......:............ 14M1D70M 58/84 69.0% 84/94230402 0.0% 1/84 1.2% 6855467 NA +3936 chr4 + 190214555 21820280 21820279 21820367 88 TGTGTGTATATATATATATATATATATATATATATATATATATATACATATATACACATACACACACACACATACAGGCATGAAGTAC chr4 - 94230402 8395789 8395788 8395876 85834527 85834526 85834614 88 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAAC .........:.:.::...x.:..:...x..:....:...::x..:.:xx...:.....:.........x...:.x.x.x..:..:x.. 88M 61/88 69.3% 88/94230402 0.0% 0/88 0.0% 13424491 NA +3970 chr4 + 190214555 21820282 21820281 21820355 74 TGTGTATATATATATATATATATATATATATATATATATATATACATATATACACATACACACACACACATACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....:...:.:.::...x.:..:...x..:....:...::x.....xx.......:...........x.:... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 13424493 NA +3677 chr4 + 190214555 21820287 21820286 21820373 87 ATATATATATATATATATATATATATATATATATATATACATATATACACATACACACACACACATACAGGCATGAAGTACTATAAA chr4 - 94230402 8395788 8395787 8395874 85834529 85834528 85834615 87 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ..:.:.:...:.:.::...x.:..:...x..:....:..:::x..:.:xx...............:....:..::..xx.x..x... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 13424499 NA +3119 chr4 + 190214555 21876477 21876476 21876531 55 ATGAGGAAATACATTAATTAGAAAGACAGGAGGAAGGAAAAGACTCCCTTTCTCC chr4 - 94230402 55151133 55151132 55151187 39079216 39079215 39079270 55 ATAAGGAAATACAGTAACCAGAAAGACATCTGGAAAGAAAAGGTGCCCTCTTTCC ..:..........x...::.........xxx....:......::x....:.:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -33274656 -60955746 +3882 chr4 + 190214555 21893137 21893136 21893253 117 TATTAAACCAGGCACCCAGAAGCAAAAATTGTGTGTGTGTGTCTGTGTGTGTATGTGTGTAAAACTCACAAATAAATTATAAGGGCAGAACGCCTTCCTAGTAATATCCAAAGCCTG chr4 - 94230402 26165506 26165505 26165602 68064801 68064800 68064897 97 TGTCAGACTAAGCTGCCAAAGACAAAAATTGTTCGTGTGTGTTTGTGTGTATCTGTATATA-----CATAAATATACAATAAGGACA---------------CATATACAAAACCTG .:.:.:..:.:..xx...:.::..........x:........:.......:.x...:.:..-----..:.....x.:x......:..---------------x....x....:.... 61M5D21M15D15M 72/97 74.2% 97/94230402 0.0% 20/97 20.6% -4272369 -89958033 +3116 chr4 + 190214555 21911494 21911493 21911546 53 TGAGAGGCGCTTGACTTTTTTTTTTTTTTTTTTTTTTTTTGGCACTTGACTTT chr4 - 94230402 60066850 60066849 60066902 34163501 34163500 34163553 53 TGAGAATGCTCTGGTTTTTTTTGGTTTTTTTTTTTTTTTTGGCATTTGACTTT .....:xxx::..::.......xx....................:........ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -38155356 -56075046 +8213 chr4 + 190214555 21948546 21948545 21948888 343 CGCTCGCAAGCTTATTGCATCCTACCGCCTGTAGAGCTGGCCTCCTCCAGCTGAGCCGAAATGCTTTCCACCCTCCTCACATTCATGTCTAGGGACGCAGGGTG--CAGAAGCGAGACTCGAGAGT---------CCACCG-GCCAGGGGCGTCTGTCC---ACGGGTCTGCACGGGAGCGCACCGCCGCTCGGCCCGGGGGCG--TCCGTGGCGCTGGGAGCGAGA----GCTTCGGCGGCGGCTGCG--------GGCA-----GGGCGCGCGGAGCGGGCTGCAGGTGCGGGCGGAGGCCGGCG---------------GGGGGCGCCGGGGGCGCTGCGCGGCCCTTGGCGGCGGGGGCGCGCGG---GGTGGC------------GGGGGAGGCCGAGGCGC chr4 - 94230402 17010423 17010422 17010817 77219586 77219585 77219980 395 CGCCCCCACGTCGCTCCCGTCCTACCGCCTGTAGAGCTGGCCTCCTCCAGCTGTGCCGAGATGCTCTCCACCTTCCTCACATTCATGCTGGGAGGCGGGAggcgcccggagccgcggcgggggagcgcggcagcaccgccgcgccggggccgcggagccggaacggggccgctgctgagcgga--gcggtgcgggccgggcgcggcgcggtggagc--ggagcggggcCCCGCCTCGGCGGCAGCGGCACCTCCCCCGACAcccgcggcggcgcggggcgggccACAG----GGCTCGGGGCCGCCGCTTCAGCTTATGCCCCGTCAGGCCGGGCTCCCTGCCCACCCCGT----GCGGGGTTGCGGGGTGAGGTGGCCCCGTGCCCCGAGGAGGAAGCCGAGGAGC ...:.x..x.::xx.:x.:..................................x.....:.....:......:..............::x:.:.:..x::..:.--.:..:x..x.:.xx.:...:---------..:...-...:...x..:xx:x..---.....x.:..xxxx.....x.--..x.:x...x.....x...--x.x....x..--......:.:----..:........:..x..:--------.:..-----..xx......:......::...----..x:x.:.....x..---------------x.xx:x......xx.x....x.:x...x.----......x:...x..---......------------..:...:.......x.. 104M2I20M9I6M1I17M3I21M2D19M2I10M2D9M4I18M8I4M5I22M4D15M15I29M4D14M3I6M12I17M 240/331 72.5% 395/94230402 0.0% 76/331 23.0% 4938123 NA +3071 chr4 + 190214555 22062565 22062564 22062682 118 GGGGATGAATTATTAAGCAAATACCAACTATAATTAACC--TTGACCTGATGCAAATATATACGTGTGTG-----------------TGTGTGTATATATATATATATATATATATATATGTTTGTAAATGTATTTG chr4 - 94230402 66471155 66471154 66471291 27759112 27759111 27759248 137 GGACATAAACCAATGCAGAAACACCAAGTGAAAGTAAAGGGTAAAGGTAATGCCAATGGATATGCGCTTGCTTGTCTCCTCTCTTACTGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATATG ..:x..:..::.x.:x:x...:.....x.:x..x...xx--.x:.xx.:....x...:x...:.:.:x..-----------------......::.:....:..::.....:.:....:...........::..x.. 39M2I29M17I50M 77/118 65.3% 137/94230402 0.0% 19/118 16.1% -44408590 -49821812 +9285 chr4 + 190214555 22088256 22088255 22088465 210 TTTTTTTCTTCATAAAGCTTACTTTTCACATGACCCAGTTCCAGAGAGCTTCGAAATTTATGGTTCAATTTAATTTTATTTAACTATGGTCATTAAAAAGACCACAAATTTGCCATTAATCACTGATTATATTCAATCAGCATTCAAGGTGACTTATGTTTTCTCACTACTTGCTACATTACAATTTGCCAAACAGGTTTCCTGGCACGA chr4 - 94230402 17037261 17037260 17037469 77192934 77192933 77193142 209 TTATTTTACCAATAATGACTACTTTT-ACATGTTCTGATCCTGTAAAGCCTCTAAATTTATGATTCAATTTGACTTTATTTGGCTTCTGTTCTTAAAAGGATCATAAATTTGCCATTAATCTTTGATTGTGTTCCATCTGCTCTCAAGGTGACTTCTATTGCTTCAGTACTTTCTACAGAACTACAAGCCAAACAGTCATTCTGCCATGA ..x....x::x....x.x:.......-.....x:.:::.:.::x.:...:..x.........:........:.:.......::..x:x..:x......:..:..:................x:.....:.:...x...x..x:............x.:..x::...x.....x.....xx..x.:xx.........x:x.:...x..:.. 26M1D183M 149/209 71.3% 209/94230402 0.0% 1/209 0.5% 5050995 NA +9285 chr4 + 190214555 22088256 22088255 22088465 210 TTTTTTTCTTCATAAAGCTTACTTTTCACATGACCCAGTTCCAGAGAGCTTCGAAATTTATGGTTCAATTTAATTTTATTTAACTATGGTCATTAAAAAGACCACAAATTTGCCATTAATCACTGATTATATTCAATCAGCATTCAAGGTGACTTATGTTTTCTCACTACTTGCTACATTACAATTTGCCAAACAGGTTTCCTGGCACGA chr4 - 94230402 17034171 17034170 17034379 77196024 77196023 77196232 209 TTATTTTACCAATAATGACTACTTTT-ACATGTTCTGATCCTGTAAAGCCTCTAAATTTATGATTCAATTTGACTTTATTTGGCTTCTGTTCTTAAAAGGATCATAAATTTGCCATTAATCTTTGATTGTGTTCCATCTGCTCTCAAGGTGACTTCTATTGCTTCAGTACTTTCTACAGAACTACAAGCCAAACAGTCATTCTGCCATGA ..x....x::x....x.x:.......-.....x:.:::.:.::x.:...:..x.........:........:.:.......::..x:x..:x......:..:..:................x:.....:.:...x...x..x:............x.:..x::...x.....x.....xx..x.:xx.........x:x.:...x..:.. 26M1D183M 149/209 71.3% 209/94230402 0.0% 1/209 0.5% 5054085 NA +3042 chr4 + 190214555 22166258 22166257 22166300 43 CTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 9524472 9524471 9524514 84705889 84705888 84705931 43 CTGTTTTTTTTTTTTTTTTTCCATTTTTTATTCTTAAGACAGA ....................::x......x..:..:....... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 12641786 NA +3240 chr4 + 190214555 22174690 22174689 22174738 49 AAAAAAAAAAAAAAAAAGAGAGAGACAGTGATTTCATATATCTTGAAAA chr4 - 94230402 16320617 16320616 16320665 77909738 77909737 77909786 49 AAAAAAAAAAAAAGAGAGAGAGAGACAATAATGCTATATTTTTTGAAAA .............:.:...........:.:..x::....x.:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 5854073 NA +3374 chr4 + 190214555 22219717 22219716 22219867 151 CTTATCTCCGT----CCAGCTCTTCCACCATCCTTGAGACTGCAAGCAATTCTCTGAAACCGTCTGTGCCTCAGTTTTCTCATCTGTAAAATGGTGATGATAATTATTGTTTTCTCATAGAATTGTTGTGACTATTAAATGAATTAATGTATATA chr4 - 94230402 59225252 59225251 59225382 35005021 35005020 35005151 131 CTTACCTCAGTTTTCCCCTCTTTCTCAGTGTCCCTGGGAAGGACAGCA-------------TTCTGTCCTTCTGATTTCTCATTTGTAAAATGGAGATGATAACTGCTCATCTCTCA-----------GGGCCATTATGAAGATTAATGTGTTTA ....:...x..----..xx..:.::..x::...:..:..xx.xx....-------------x.....x.:..x.x........:..........x........:.::.xx.:.....-----------x.:.:....x:x::........:.x.. 11M4I33M13D56M11D27M 88/127 69.3% 131/94230402 0.0% 28/127 22.0% -37005535 -57224867 +3876 chr4 + 190214555 22244448 22244447 22244521 74 ACTAGCTGTGTGACCTTAGGTAAGTTATTTAAATTACATGTGTCTAAATTTCTGTATTCATGAAATGGGGATAA chr4 - 94230402 11947210 11947209 11947283 82283120 82283119 82283193 74 ACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAA ....:................x...:.:....x:.:.x......:x.:....:x:..x:........:xx.... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 10297238 NA +3024 chr4 + 190214555 22272358 22272357 22272395 38 TCAAGAAAGGACAAAACAAACAAACAAACAAAAAAAAC chr4 - 94230402 81661608 81661607 81661645 12568758 12568757 12568795 38 TTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAAC .:..:...::............................ 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -59389250 -34841152 +83873 chr4 + 190214555 22387554 22387553 22389199 1646 GATAAAAATAAGTAAAATCCAAAACTTCAAAGTTTATTCCAAATTCTT-------TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGC---TCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAG--GAAGCCCAGCAATGTTACACAGTAGTTTCGTGTTTCCATAATCCAGTCCTAACATTGCCAGTGCTATCGGTACCGAGCAAGGGTCCCTCCTGCCCATTGCTTTTAATTGGTCCATTCTGAATGGCCAAGTTGAGGCCATAAGATTTTTGCTGATTTTCAAGTTCAACCACAGCTGGCTTCCTTAACGCATCTTTTTTACTAGTGGTTGAAACTGGCTTTTCAAAATTTCTGCTACTTTTGGGAAGTGTGCTACAAGCATCGCTGCTGTCTTGCTGGGGTGGGTTGTACTGTCTCTCTCTGTAGGCTAAATAAGCTCTTCGGCTCCTCGAGTGTCCTTCGTTATTGCCCAGCCGGCTTTTAGGTAAGCCGTTCTGCACGCTTCCTTCCACGCTCGTTGGGACATCGTAGGCATATTCTCTCAGGACTGTGAGTCGGCTTGCCCGGTGTCCTTTACTTCTGTTTTTATGGTGGCGGCTTGAGTGCACATTTGTTCGAAACTGAACTTCTAAAGGCGCCACGTGCATTTTAATATCATTGTCCATTGAATGTTCTGTCAGACTATTATCAAGCTGAGGGGTGGAGTTCAAAGGTAAAGAATTGGCATGGCACTGAGCTGCAGCCGCCTGCAAGTTTGTTAATTTGCAGCCCTGGGAGGAATTTTTGAAGCTTGAAGCACTTTTGTTTGTGCATGAAGACTCCGCACTGCTATTGGGGCATTTGGGTGCCTCTCCATTCGTCCCATTAGAGTTGGGGGGCTGGACGTTGACTTGCACTGAATACGAGCTCCGTCCTGGGCAGCAAGTCATGATCCACGCAAGTCTAACATCCTCCCTATTAACACAATGGTGGACCACGAAGAACGCACTGAAGCTTAAACTTGTGGCTCCAAAAACGAAGCTAAAAACCAAGTCCAAAGGGTAATACAAAGAAACAGCCAAAGCCCCAAACATCCACAGTGCAACATATAAGAGCAAAGTAAGGCTGGCCCCCAAGAGCTGAGAATGAAAAGTGTGCTCATTTTCCAAGGCTGATGTAGAAATCAGAGACAAAGACATTGAATCCTGATGATTTATTTCGCCATTTTCATTGGCTGCCAATCTCTGTTGCTCCTCCGTGGGCTCCTTAAGCTCATATTTGCGCTCAGGGTGTCTTTTCAACTGAATAAATATGCTCAGAAAGTACATGCAGTTTACAAAAGTGATGAAGCTGGCTGGCCCATAGAAGGCTCCCAAGGAGGGTTCCCATGCCATCCAGCAACTGGAAAAGAAAATGGTAAACCAGATCGATGCT-------ACATGTTTCAACAAATTATCTACG------------AAA--------TTGCAATCACCTGTAATGCCTAGAAAATACTTAAAAGA--GAAACAACTGGGTCAAGTACACAGAGAA---------------------------------TATAAAATACTCACTAGGGTGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTGCTGCAGTTATGCCGCAAACAATGATGGGGATACCACCACCAATCAGGTAAAATCTAGAAGGAGGAATCA chr4 - 94230402 17110683 17110682 17112390 77118013 77118012 77119720 1708 GATAATAATGCATACAATCTTTTGCTTGGCAGATTATCTCTGTTCCATCCCTGCATAAAGTACCTACAAT--TTGTAAACAGTCTTTAGAAGCATTTAATAGCTTTAAGGAATGTGTA-ATCACAGTTCATATGGATTTGTCCCACACTGAAG----ATAATGCTACACAGTAGTCTCATGTTTCCATAACCCAGTTCTAATATTACCAGTACTGTCTGCAGTGAGCAAGGGTCCATCCTGTCCACTGCTTTTAAGTGGTCCATTCTGAATGGCTAAATTTAGGCCATAAGATTTTTGCTGGTTTTCAAGTTCAACCACTATCGGTTTCCTCAGTATCTCTTTTTTGTTGTTGGCAGCTATTGCTTTTTCAGTATTTCTGCTGCTTTTTGGAAGCGTGCTGCAAGCATCGCTGCTATCTTGTTGGGACTGGTTATACTGACGTTCCCGGTACGCCAAATAGGCTCTCCGGCTCCTTGAATGTCCTTCACTGTTGCTTGGTCGGCTTTTAGGTACACCATTTTGCACACTTCCTTCAACGCTCGTAGGAACATCGTATGCATATTCCCTCAGTACTGCGAGCCTGCTAGCACGGTGCCCCTTGCTTCTGTTCTTGTGATGCCGACTTGGGTGCCCATTTGTCCGAAACTGTACCTCTAATGGAGCTACGTGCATTTTGATATCGTTATCCACCGAATGTTCAGTGAGACTGTTATCAAGCTGAGGCCCTGTGTTTAATGGTAGGGAAGTGGAGTGGCACTGAGCTGCCGCAGCTTGTAAATTAGTTAGTTTACAACCTTGAGAAGAATTTTTTAGGCTTGCTGCACTTTTATTTGTGCACGAAGATTCTGCACTACTGTTGGTGCACTTGGGGGTCTCTCCGTTGGTTCCACTGGAACTGGAGGGCTGAACGTTCACTTGCACAGAATACGTACTCCTTCCGGGGCAGCAAGTTGTTATCCACGCATGCCTGACATCTTCCCTGTTAACACAGTGGTGTACCATAAGAAAGGCACTGAGGCTTAAACATGTTGCCCCAAAAAAACAGCTAAAAATCAGGTCCATAGGATAATACAGGGAAACGGACAGAGCTCCAAAAATCCACAGAGCAATGTACAAAAGCAAAGTAAGGCTCACTCCCATAAGCTGTGCTTGAAAGCTGTGCTCGTTCTCTAATGCAGATGTGGACACTAATGACACTGACAAGGAATCTTGGTGAGTCAGTTCCCCATGTTCATTGGTAGCCAGACGCTGCTGTTCCTCAGCTGGTTCCTTAAGCTCATATTTACGTTCAGGGTGCCGTTTTAGTTGTATGAATATGCTGAGAAAATACATGCAGTTTATGAAAATTATAAAGCTAGCTGGTCCATAAAATGCTCCTAAGCTAGGTTCCCAAGCCATCCAGCAACTGGAAAAACAAACACACAAACAAA--AAAGTTAAGACAAACACGTTTTCATAAGTAACTTACACTTCACTGGTTCAAAATAGTACTTTGAAATGACCCTGGCTGCATTACATTTTCTGGAACGATCAGAATCACAGGG---AGTATACAGAAAAGCAAGACTGAAACCTTATGACAGAACTCTCAGTTATACGGTACTTACTAAGGTGCATTAGGTCTGCTGCCATAATTGCGGATGTTTGCTGCTGCTGTTATTCCACAAACTATGACAGGGATTCCTCCACCAATAAGGTAGAACCTAAAAAGTAAAACTA .....x...:x:..x....:xxx:...x:x..x....::.x:x.:.x.-------.x:.:.x....:::.--:..........:....:.x..---.x.......:..........x:-.........:.....:....x.x..xx:--....----::....:...........:..:...........:.....:....:...:.....:..:..x.:.x:............x.....:...:.........x..................:..:..x....................:.................x:::..:.....:.::::x........::.:x...:x.xx.:..x:......:x.........:.....x.....:.....:..............:.....:....::x....:.....x.x:..:.x...x..:.....:.....:........:..:........::.:....:::.:.............x:..:..:.....:........x........x..:........x........:.....x....:...:.x...x..x.....:..:..:........:..:..:..x..:....:....x.......:........x..:.....x..x..:...........:.....:..:....::........x..x.....:..............xx:x.x...:..x....::...x...x:..............x..x..:..:..:..x....:...:..:..:..:..:........x.:.....xx........:........:.....:..:.....:..:....x...:.....x.:......:..x..:...:.:..::...:......:.....x........x.......x:....x...x...........::.x.........x.:..:.....:.....:........:.....x....::.::..x.......:........x...x..:.......x:x.........:..:.....x...:.......::.....:.x..:...:.....x........x....::..:..:..............x:.:....x:.....x.xx.....:x.......:..:..:..x..x.....:..x.::.:x....xx....xx.....:..:...x.:.x...x....x........:x....:x.x...:..:.....x.:x..:.................:..:........:.x...:.::..x..:........x.....:.............::...:.x..:.....:.....:.....:..x.....:...xx:........x....................:x...::xxx..x..:.--:.x.:.-------...:....:x.:..:.x.::...:------------...--------...x...x...:xx:x...x.x:x.xx.x..x:..x..--::..:x..x...---....:.....:..---------------------------------....x::....:....:.....:..x..:.x:.....:.....x:x:.....:........x.....x..:.....x....::.....x..x........x.....:..:...:..:.x::..::. 48M7I15M2D21M3I22M1D28M2I4M4D1274M2D6M7I24M12I3M8I38M2I12M3D13M33I126M 1238/1634 75.8% 1708/94230402 0.0% 86/1634 5.3% 5276871 NA +10868 chr4 + 190214555 22392543 22392542 22392719 177 ACCTGAGCATTGGTCTTGGTGGAGGTGGTGGTTCATCAGGATCCTGGCATCTTTTAGCTTTTTTAGTGACTTGTTTGTAGATATTTCGAGCTGTCACTCCTACCCATAGTACTGTGGCAAGGGTGGAATAGTGAAGAATTATCCCAACCTACAAGGAAGATCAAAGAATAAATAAAA chr4 - 94230402 17115264 17115263 17115429 77114974 77114973 77115139 166 ACCTCAGCATTGGTCTGGGTGGAGGTGGTGGCTCATCAGTATCTTGACATCTTTTTGCTTTTTTGGTTACTTGCTTGTAAATGTTACGAGATGTCACTCCCAGCCACAGTACTGTTGCAAGAGTGGAATAATGGAGAATTATCCCAACC-----------TTAAAAAATAAAAACAA ....x...........x..............:.......x...:..:........x........:..x.....:.....:..:..x....x.........:.x...:........x.....:........:..:...............-----------.:...:......x.x.. 149M11D17M 141/166 84.9% 166/94230402 0.0% 11/166 6.6% 5277279 NA +9537 chr4 + 190214555 22401425 22401424 22401576 152 ACTTACTGCTTGGCAGATGCTGGCATTCCTAGTCTGGGTTATTCCTCCCACAAAGACCACACAGGTTAGGAAAATATGAAAGCACAAGTTCACAAGCATGTGCCAGCTCTTGAGGCTGATTCTAATCAAACTGTTTAAAAAAGAGAGAAAAT chr4 - 94230402 17116354 17116353 17116505 77113898 77113897 77114049 152 ACTTACTGCTTGGCAAATGCTGGCATTCCTGGTCTGAGTTACGCCTCCAATGAACATCACACACGTCAGGAAAATGTGAAAACTCAGGTTAACCAGCATATGCCAGCTTTTCACGCTGATCCTGATCACACTGGTAAAAAAAAAAAAAAAAT ...............:..............:.....:....:x.....x.::..x.:......x..:........:.....:.x..:...x..x.....:........:..x.x......:..:....x....x.x......:.:.:..... 152M 122/152 80.3% 152/94230402 0.0% 0/152 0.0% 5285071 NA +7384 chr4 + 190214555 22402668 22402667 22402811 144 TTCTTACCTGTGATGGTATATGTAACTGACAATGACGGCTAAGAGACATAAGAGGAGAATGATAGCGGTAGTATAAACCACAGGATGCAGGAGGCTGGCCGCCTGGGTGTATAGTTCAGATCCCGTCAAATCCTGAGGGCAAAA chr4 - 94230402 17117029 17117028 17117172 77113231 77113230 77113374 144 TTCATACCTGTGATGGTATATGTAGCTGACTATGATCATCAAGAGGCACATTAGCAAAACCATGGCAGTGGCATAAATTACTGGATGCAAAAGATCAGCTGGCTGTGTATATAATTCAGCTTCTGTCAAGTCCTGACAACAAAA ...x....................:.....x....:x:::.....:..:.xx..x.:..:x..:..:..:.:.....::..x.......::..::::..:.x...x..:....:.....x.:.:.....:......x::..... 144M 103/144 71.5% 144/94230402 0.0% 0/144 0.0% 5285639 NA +27060 chr4 + 190214555 22413156 22413155 22413830 675 ATGCATAAAGTTAACAACTGCCATACCATTAAAACTGCATAGTTACTAAGGGAGTAGCACTGAATCGTAGTGATATTTTCATCTGAATAGAGTATATGGCACCCATCTGACTTCCAGCCTCCTTGTCCGTTCAGCAAATCGAAATCCCACCGGGCTGCAACAGCATCTGCTCCATGTGCAATTCGACGCAGTGTCACATTAACAGGGATGTGGTGGGTATCTACATTCACACCATCTGGAGAAAATGGGAAATAAAAATATTTCTGAAACAAACTTCATAACCAATTATAAATGTCAACTTCTACAGTAATGGGTACTCTGCAAGATCTTTC-TTCACTAGTGACTCATTAA---AACGAGAAAACACTAAAATAAGCATTTTTAGGAACAGTCAACTACAAGGCCTTATTGTCCACTGACTACAGGATAACATATGCCACATACAAACCTATTTTGGTGAGAATCACAGGGGTAACCACAGTACGTCGTTTTCCATCATCAGCCAAATTTGTTGAATTTCCAGTGGCTGGAAAAAGCTTTCCATTGCGGAATGCAATGAGTTGAAGCTTGTAAAGAGAGTCATCAGTTGGTCTGAGTTCTCTTTTTTGCTTTGGTGAGAAAAGGGAAGGAGGAAGCTGAATAGAAGCCTCCACAATAGTATTCTGAAAAAATATATAT chr4 - 94230402 17120542 17120541 17121157 77109246 77109245 77109861 616 ATATGTAATGTTAAG---TATCATACCATTAAAACTGCATAGTTGCTGAGGGAGTAGCACTGAATGGTAGTAATGTTTTCATCAGACAGAAGAATGCGACAGCCATCAGACTTCCATCCCCCTTGTCCATTCAGTAGATCAAAGTCCCACTGAGCTGCAACAGCATCTGCTCCATGTGCAATGCGTCTCAGTGTCACATTTATAGGAACATGGTGACTGGCTGGGTTCAAACCATCT------ATTAGAAAATAAATGCAGTTGC-ACATAAATTTCCCAGC---------AGGTCAAATGCTAAAAAAA------------AAAATCTCTCATTTTTTAGATATGCACAAACTTGATGCAAATAAGTCAACAGAAGTGTCTCAAAGATCA------TAAAAA-------TGTC-------------ATAATA------AAAAACAAACCTATCTTGGTAAGAATGACTGGTGTCACAACTGTACGACGTTTCCCATCATCAGCAAGGTTTGTTGAATTTCCTGTTGCTGGAAAAAGCTTTCCATTGCGAAATGCAATAAGCTGAAGCTTGTAGACAGACTCATCTGCTGGTCTGATTTCTCTTTTTTGCTTTTGGGTGAAAAGGGAAGCTGGCAACTGGATAGAAGCCTCAATGATTGTATTCTAGAAATAAACAGAT ..:::...x.....x---.::.......................:..:.................x.....:..:........x..xx::..x..::.:..x.....x........x..:........:.....:.:...:..:......:.:.............................x..x.x............x.:...:.::.....:x.:x..:x:....x.......------.x.:.:.......x::.x..x:-.x.:...:...x:.:.---------.x.....x.x...x.:x..------------..:....:..-..:x:...xx.:x..:x..---:.:.x:..x.x:::..x.x...::.:.:x.:..x..------..x..:-------....-------------....:.------.x.x..........:.....:.....x..x..x..x..x..x.....x.....:...........x.::..............x..x.......................:........:..:...........:.x...x.....x.:........x................x.x.x...........xx..x.:...:...........x.::..x.......::...x.x.:.x.. 15M3D219M6D22M1D16M9D19M12D10M1I19M3I36M6D6M7D4M13D6M6D240M 467/612 76.3% 616/94230402 0.0% 67/612 10.9% 5292614 NA +13181 chr4 + 190214555 22420884 22420883 22421161 278 ACCTTTAGTGCCAGACTCGAAAATGTATTTGAAACATTGCACTTAAAGCTCAGCTGCTTATCCAGGTTTCCCTCTGGATCCCGCCTCCCATAATCCGAAAGTCCTGTACGATCAGAGGCTGCCACTTTCTGGAACACGGTACAGGTCATCCCCGTGAAGCCAGTAGACTTGATGACATAAGCTTCCAGAGCAATATTGGGTGAATACTTGAAAAGT--CAATCA------AACAGGAGTTATGAACGATTTATAGCACAAAGGAAAAGCACTTTCAAAGACTTTTC chr4 - 94230402 17122169 17122168 17122454 77107949 77107948 77108234 286 ACCTTTAAAGCCAAGCTTGACAGTGTATTTGAAACATTGCACTTAAAGCTTAGTTGCTTATCTAGATTTCCATCTGGATCTCTTCTCCCGTAATCACTGAGTCCTGTACGGTCTGATGTAGCCACTTTCTGAAATACGGTGCACGTCATGCCAGTGAACCCAGCAGCCTTTATTACATAAGCCTCAAGAGCAATATTTGGAGAATACTGCAACAACAACAATAAAAACTTAACAATAAAAATGTATGCATTACAGGAAAACAACAAATCATCTTTAAGAGATTCTC .......:x....::..:..x.:...........................:..:........:..:.....x........:.x:.....:.....xxx:...........:..x..x.:x...........:..:.....:..x.....x..x.....x....:..x...x..x........:..x...........x..x.......xx..x.::--....x.------....:x.:xx...x.:.xx...:..x.x..x::x...x..::..:..:::x..:.. 216M2I6M6I56M 207/278 74.5% 286/94230402 0.0% 8/278 2.9% 5298715 NA +11612 chr4 + 190214555 22424169 22424168 22424361 193 TCTATGATAATGTTACACTTACTGTTGAATAAACGTGAGCTCCACCGGCTAGCCGGTAGGTAGCAATGCGCTGAAGACACTGCACAATCCTACTGCAGGCTTTAGCTTCCCTCTGCGCCAGCCACAGGACACGTTCATCAGCCAACATGATGTTACTTGCAATGTCAACCATCACGTCACCTAGCTAGCAGGG chr4 - 94230402 17122612 17122611 17122803 77107600 77107599 77107791 192 TCTATACCAAT-CTATACTTACAGTAGAATAAACCTGAGCTCCATTTGCAAGCCGATACATAGCAATTTTTTGTAGACACTGTACAATTCTAGTGCAAGCCTTGGATTCCCTTTGTGCCATCCACAGAACACGTTCATCAGCCAACATAATGTTACTTGCTATGTCCACCATCACATCACCAAGCTAACAAGG .....:x:...-:..:......x..x........x.........::x..x.....:..x:.......x:x:..x........:.....:...x....:..:..:.x......:..:....x......:....................:...........x.....x........:.....x.....:..:.. 11M1D181M 154/192 80.2% 192/94230402 0.0% 1/192 0.5% 5301557 NA +10303 chr4 + 190214555 22435308 22435307 22435492 185 TACCTCTTTTGATTTTTCCTCCTTGGTAAATCTTCCAAATTTTTCAATCATTTCTGCCACAAATATAACATCCATTTTGTCAGAAAAGTTGGCTGCTTCCACAGTGTAAGCCAGTAACTGTCGAGCTGTTGCCACGGCATTGGTAAGATTGAGGGGCATCTACATTTCAAAG--GCAAAAATGATCA chr4 - 94230402 17125364 17125363 17125541 77104862 77104861 77105039 178 TACCTCTTTATATTTTTCT------GCAAATCTTCCAAATTTCTCTATCATTTCAGCCACAAAAATAACATCCATCTTATCAGAAAAATTTGCTGCTTCAACAGTGTAAGCCAAGAGCTGTCTTGCTGTTGCCAATGCATTAGTGAGGTTGAGCGGCATCTACA---CAAAGAAGAAACAATGTTCA .........xx.......:------.:...............:..x........x........x...........:..:........:..x........x.............:x.:.....xx..........xx.....:..:..:.....x..........---.....--.x..x....x... 19M6D139M3D5M2I13M 149/176 84.7% 178/94230402 0.0% 11/176 6.2% 5309944 NA +14306 chr4 + 190214555 22436434 22436433 22436720 287 AGTTACCTGATTAAACATATAAAGAACTCTAGTGACATCATTTGCATACTGACAGCGAGAATAATCATCATCTGCCCAAAAGCCACCTCTATCACATCTGCGCCAAGCTTTTCTCTCATCCTGTGGGTTTCCGGGATATATCCCACTGCCATGGGTGTTCCGCGTACACTGCAGATATGCAGTAATGCCTGCCAATGTTCTGGGCCATCTAGAGA--TGAAGACAAAATAGTACAAGAAAATCTAAATGACACGGGTACATCAAGAATAACAACAGCAGAGAAAAAAAT chr4 - 94230402 17128425 17128424 17128692 77101711 77101710 77101978 268 AATTACCTGATTGAACATGTAGAGAACTCGGGTCACATCGTTTGCATATTGGCACCTAGAATAGTCCTCTTCTGCCCAGTATCCTCCCCTGTCACATCTGCGCCAAGCTCTTCTCTCATCTTGTGAGTTGCCAGGATATATCCCACTGCCAGCAGAGTAACGTGTACACAGCAGGTACGCTGTGATGCCTGCCAATGTTCTAGGCCACCTGGGGAGTCAAAAGCaaaaaaaaaaaaaaaa---------------------taagaaaaaaaaaaagagagaaagaaaT .:..........:.....:..:.......x:..x.....:........:..:..x.x......:..x..x........:x.x..x..:..:..................:..........:....:...x..:..................xx:.x..xx..:......x....:..:..x..:.................:.....:..:.:..--::..::.....x.:x.x..:...---------------------:.....x..x..x.:x.......:.... 215M2I23M21D28M 208/266 78.2% 268/94230402 0.0% 23/266 8.6% 5308009 NA +11948 chr4 + 190214555 22438247 22438246 22438452 206 AACACTGACCTGAAGTCACCTTTGTTGTTTACCACCCTCTCTGGAGGACAGTACTGTGCAGAACTCTCTAATACCACAATATCCACAGTCCTCGTATTATTCCCACGTTTGGTCTGGACATGACAGCCCCAATTTCCAGTAGATCCAGCCTGAATATTAGAAATGGTTAGGGCACTGCATAAAGAAAGATTTTAAAAAGAGAGAAA chr4 - 94230402 17135836 17135835 17136035 77094368 77094367 77094567 200 AAAACCAACCTGAAATCTCCCTTATTGTTCACAACTCTCTCTGGAGGGCAGTATTGTGCAGAACTTTCCAATACCACAATGTCTACTGTCCTCGTATTATTTCCACGTCTGGTTTGTACATGGCAGCCCCAGTTTCCTGTGGAGCCAGCCTGAATGTTTGAGATTGTCAGTGCACTG------GGAAGATAGAATAAACAAACAAA ..x..::.......:..x..:..:.....:..x..:...........:.....:...........:..:...........:..:..x..............:......:....:..x.....:........:.....x..:..x...........:..x..:..x..:..x......------.:.....xxx.x...x.:.x... 177M6D23M 160/200 80.0% 200/94230402 0.0% 6/200 3.0% 5302411 NA +17291 chr4 + 190214555 22442640 22442639 22443042 403 AAAAGTTTACCTTGCAATCAAGGAGCAGTTGTGAATCATGTTCTTTTCAACAAAAATACCTTGCGATTCATCGGTTTCAACTATTCTCCCATCCTGATACCACAACACTTGCATGTCCTGATCAATATATGAAGCCATGCACTGGAAAGGAAGGCTGTCTCCTTCAAACACAACTTGGCGATGAGATGGAGTCATGTAGAAAGACGGCAATTCAAGCGGAGGGTCTAGAGACAATCAAACAAAGATTCAGTAAACAAATATAATTTCCAAACACCATAATTAAAAGTTACAGAAATTCTAGGTAA--AATAATAAAAACAGAACAACAAATATTCCTCAATAATCAGCATGCTACTGCTAGTATCAACCAGGCTGCTACTGAGTTTAGTG-ATAACAGATTAAAAC chr4 - 94230402 17136896 17136895 17137263 77093140 77093139 77093507 368 AGACATTTACCTTGCAATCAGGGAGCAGTTATGAATCATATTTTTTTCAACAAAAATACCCTGGGACTCATCTGTTTCCACAATTTTTCCATCTTGATACCACAAGACTTGCATGTCTTGATCAATATATGAAGCCATACATTGAAAGGGTAGACTGTCTCCTTCAAAAACAACCTGGCGGTGAGATGGAGTCATATAGAAAGACGGTAATTCAAGAGGAGGTTCT---------------AAAATTCAAGAAATAAA--------------AACACAATTAATAGCCAGAAATATGCCATATAAGTATTTTTCAGAAAAGGAAAAAGA-------TTAATCAACTGCGTACTACTGATATAATCACATAGTAAGCTG--GTGTTTGATGCATCAGAAATTCAAAC .:.x:...............:.........:........:..:.................:..x..:.....x.....x..x...:.:.....:...........x...........:....................:..:..:..:..x..:..............x.....:.....:..............:...........:........x.....x...---------------..:.....:x...:...--------------.x..:......x..::.x.:.x..x.:.x:...--.x.xx.x.:..x..:.x..x:.-------.:...x.x.x..:.:......x..xx....xx:..xxx...:--.x....::..-..x.x.:...x.... 226M15D17M14D33M2I22M7D42M2D10M1I15M 285/365 78.1% 368/94230402 0.0% 41/365 11.2% 5305744 NA +9714 chr4 + 190214555 22444968 22444967 22445146 179 CTTACCGCATGTCAACAGCTCCTGCTTCACGCCTGTGACTGGTTGGGCCTGCAGTGACTTAGGATAAACACACCTGGTATCCCGTACCGTGATGTTCTTCTCCTTTACCCAGCGATGCATCCACAGTATGTTACAGTCACACAAAAGATACTCAGTCTGGAATTCCCTGTAACATGCAA chr4 - 94230402 17137621 17137620 17137799 77092604 77092603 77092782 179 CTTACCACAGGTTAGAAGCTCTTGCTTAACACCAGTCACTGTCTGTGACTGAAGTGACTTGGGATAGGCACACTTAGTCTCACGTACAGTTATATTTCTTTCTTTTAGCCATTGATGCATCCAGAGTATGTTACAATCACAAAGTAGATAATCAGTCTGAAATTCTCTGCAACACAAAA ......:..x..:.:x.....:.....x..:..x..x....x:..x.x...x........:.....::.....:.:..x..x.....x..x..:..::.:..:....x...x:..........x...........:.....x.:x.....x........:.....:...:....::x.. 179M 135/179 75.4% 179/94230402 0.0% 0/179 0.0% 5307347 NA +3297 chr4 + 190214555 22450354 22450353 22450413 60 CTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTACA chr4 - 94230402 18197139 18197138 18197198 76033205 76033204 76033264 60 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.::..........x...x..x.x........::x:.........:.:....x..:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 4253215 NA +4855 chr4 + 190214555 22454852 22454851 22454957 106 AAAGATATACTTACAGCCGAACCAGATTGGTGAGTCCTCGAAATATGTCTGCATTCAGACATCCTATTCGATTGTTTGTCAGATCCCT---AAGGAGAAGGGTGGAAAA chr4 - 94230402 17140476 17140475 17140584 77089819 77089818 77089927 109 AAAATTATACTTACAGTCTAATAAGATTTACAAGCCCTTTAAATACGTCTGCATTCAGGCAGCCTATTCTGTTATTAGTTAAGTCTCTACAAATAAGAAAAATGTAAAA ...:x...........:.x..:x.....x:::..:...:x.....:............:..x.......x:..:..x..:.::..:..---..x:....:::..x.... 88M3I18M 76/106 71.7% 109/94230402 0.0% 3/106 2.8% 5314376 NA +5382 chr4 + 190214555 22461704 22461703 22461821 118 TCAAACTCGTAAGCAAGCAATTCAAACACTTACAATCTTTTTAGAGATGACAGTCCCCAGAAGGCACCTGGATCTATACTACTAATAAGATTGTTTCGGAGGTCCCTGTTAAAAATAA chr4 - 94230402 17141834 17141833 17141948 77088455 77088454 77088569 115 TTAAATTGATGAGCTAGATAT---AGTACTTACAGTCTTTTCAGAGATGAAAGCCCCAGAAAAGCTCCTGGATCTATAGTACTTATAAGGTTGTTCTTAAGGTCCCTGCAGAGAAAAA .:...:.x:.:...x..xx..---.::.......:......:........x..:...x::..:..x............x....x.....:.....::x:.........:x:.:..x.. 21M3D94M 84/115 73.0% 115/94230402 0.0% 3/115 2.6% 5319870 NA +8380 chr4 + 190214555 22477653 22477652 22477899 247 CTGTCATTTCCTCAGTCATAAAAGCTTTAGTACGAGAAATGATAGATTTTATTGAGGAAAGTAAAAAGGAAGACATTTCATCACACTTAAAACGTTATAACTGTAACCTT--AAAAATACAGTTTACAACCTCAAGTTAATGTATTCAGTCTACACATTATTTGATGTGTTTAAGGATTTTGTGCAAGAAAACAGAATCAGTATGAATAAATCTACTC--TGCAGACAGCTTTTACACTCAATTTTGAAAT chr4 - 94230402 17160352 17160351 17160596 77069807 77069806 77070051 245 CTGTTAGTTGCTCAACCATAAAGG-TTTAGTACAATAAATGATAGATTTTACAACACTCCATATAACCTAAGACATTTCATCATACTTAA--TGCTGTAAGTGTAATCTTTAAAAAATGCAGTTTAAAACTTGCTATTAATATACTTAGTCTATACATTATTAGAAGTGTTTAGGGACGTGGCATAACATGACAAAA-CACCATAAAGCACTCACTTCAAAGTAGACA--TTTTATATTCACTTTTACAAT ....:.x..x....::......:.-........:.x...............:x:x:xxxx:..x..xxx..............:......--:.:.:...x.....:...--......:.......x...:.xxx:.....:..:.:......:........x..x.......:...:x.x.:::..x.x:...:..-..x:..:..xx.x..xx:..--x.:.....--.....:.:...x....:x... 24M1D65M2D18M2I85M1D20M2I8M2D21M 173/241 71.8% 245/94230402 0.0% 10/241 4.1% 5317301 NA +3606 chr4 + 190214555 22513587 22513586 22513669 83 CTGCAATCTCCACCTCTCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGAATGACAGGCATACGCCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..::.:xx.x..:::...........x...x.xx.x.........:.............:x...--.:.:.:.....::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 4316461 NA +11829 chr4 + 190214555 22515521 22515520 22516133 613 TACTCACAGGGTGACCGTGCGGTTGGGCAGAGTATCTGGGGGCAGGACCTGCGCGAGTTCCAGGCTGCTGCACACCACCTTGCCCTC------GGCGGCGCCCGCCGCCCTGCCAGCCCCTCGGGGCCGCCCATCGTGCTTGCAGCCGGCGGGCAGCGCCGCGGCGCCGCCGC----CGCCGC------------CGCCTCCCAGCAGCGC---GAGCAGCGCTAACAGCGA--GAGCGGCAGCAACAGCG-GCGGCTGCGCGCGGCCCCGCCGGCGTCCGGG---TGGCTCCATGCTGCGGGCCGGGGCCTGCGGGGCGAGCGGCG--------GCGCACTGGCCTAGCGGGCCGCCCCGGAGCCCGGGCGGGCAGGAGCGCGGCGCGGGCCCAGCGGCGACCGGAGCCTTATGGCGGCCGGAGGACGGGCCTTCCCCGGCGCGGACATGCTCCTTTGTCCGCTGCGGCTGCGCTGGGCCTCTAG--GGAGCCGGGGGTCACGGCCGCATGGGTCCCAGCGCCGCTCTACCGCCCGGCGCGAGCACCGCCTCCTCCTCCTCCTCTGCCGCCGCCGCCGCCGCCACTGCCTCCTCCCCTGGCCAGGACCCGCG-CGCGGCGGCTCCTCCCCGCCCGCCGCCGGCGGCCGCCCCCG chr4 - 94230402 17176169 17176168 17176777 77053626 77053625 77054234 609 TACTCACAGCGTAACCGTCCGGTTGGGCAGTGCCTCGGGAGGCAGGACGTGAGCGAGCTCCAGGTTGCTGCACACCACCTTCACCTCCAGCGGGCCGCCAGCTGCCGCTTTGCCGGAGCTTTTGGGGCGCCCGTCGTACTTACAGCCCGGGGGCAGCGCGGTGCCGCCGCCCCTCAGCGCCGCCAGGAGAAGAAGCGCGGCCAGGAGGCGCGCAGGGCGGCGGGCACGGGGACGAAGCGGGCGGCACGGAGCGCGGCGGAGCGGGGGCAGCATGGCGCTCGGGGCCCGGCCCCGCTCCTCCTGGAGGTGCCGGATGGGAGAGGAACGAGGAGGGAGCGC---GGCGGAGCGGGCCCTCACTTAGCTccgcgggggcggcgccaggcgcggccgcAGCT----CCGCCGCCATGTGGT-GCCGGGGGGTGG--------CGGGCCGGAGCTGCCA------CCGCCGCACCCGCCCTCGTCTTTGTGTCGGGGCCGGGAGGGCCCCTCGCAGCGGCAGCAGCGCCGC-CTTCCG-CCGGTGTGAGAACC-CCACGGCTTgcgcgcccgccg--ggccccggccTCACTGC-----------GCAAGCGCCGCCGCCGTGGCGG-TCCTCACCG-----CGCCTGCG--CGTCCCTG .........x..:.....x...........x.:x..x..:........x..x.....:......:................xx....------.x..x.:x.:.....::....:.xx.:.:x...x.....:....:...:.....x.x.........x.:.x.......x.----......------------...xx..x:.x:....---.:..:...xxx..:.x..--:.....xx.xx..:.x.-.....x.x...x..x.xxxx:....::....---:...:..::x.:x.xx.xx..x...x.xx...x...x::..--------....---...xx........x:.x.xx...:.x.xx...xx..x..xx.......x.x....x----...xx...x.:...:-.....:..::..--------...xx....xx...:x------....:..:x.:..x..x.x.:.:xx.--..:......:.xxx.xx:....xx..:xx.........-..x...-....:.:...x...-..x.xx.:.x.x.x:.:....--.x.x...x.x:......-----------..x..x:..xx..-..:.....-.....x...-----....x...--..:...:. 87M6I80M4I6M12I16M3I18M2I17M1I31M3I41M8I4M3D56M4D15M1D12M8D16M6D26M2I38M1D6M1D14M1D21M2D17M11D13M1I8M1D9M5D8M2D8M 395/567 69.7% 609/94230402 0.0% 88/567 15.5% 5339352 NA +3799 chr4 + 190214555 22515995 22515994 22516075 81 CCCAGCGCCGCTCTACCGCCCGGCGCGAGCACCGCCTCCTCCTCCTCC---TCTGCCGCCGCCGCCGCCGCCACTGCCTCCTCC chr4 - 94230402 31573125 31573124 31573207 62657196 62657195 62657278 83 CCCAGAGCCACTGT-CTTACCAGAGCCAGCACCGCCGCCTCCTCCTCCAAACATGCCACCGCCGCCTGCGCCGCTGCCTCCACC .....x...:..x.-.:xx..:.x..x.........x...........---:x....:........xx....:........x.. 14M1D33M3I33M 63/80 78.8% 83/94230402 0.0% 4/80 5.0% -9057130 -85173272 +3394 chr4 + 190214555 22549646 22549645 22549724 79 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGACTCTCGAGTAGCTGGGTTTACAGGCATGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:...........:.x...x.xx.x.....x..:..:.........:x:....--.:..:..... 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 4352520 NA +3472 chr4 + 190214555 22572133 22572132 22572200 68 TATACATATGTATGTGTGTATATATGTATATATGTGTATATATTTACATGTGTGTATATACACATGTA chr4 - 94230402 68323952 68323951 68324019 25906384 25906383 25906451 68 TATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTA ...::...x.:......x........x...x.x....::.::.........:..:.x.:.x.:..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -45751819 -48478583 +3175 chr4 + 190214555 22624497 22624496 22624600 104 ATATATATGTGTGTGTGTATATATATATGTGTATATATATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAAAACATTTTCTTTATCTTA chr4 - 94230402 81401293 81401292 81401396 12829007 12829006 12829110 104 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAGTGCCTTTTTGTTA ....x.x.....x.....x..x.x....:.::...x:x:.x::...:x..........:..x..:.x:....:x..:..:.x.x.:::x.x.x:....x.x... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% -58776796 -35453606 +3107 chr4 + 190214555 22624522 22624521 22624578 57 TATGTGTATATATATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959624 61270779 61270778 61270835 57 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATAT .:...::x....:..xx....x.....::...:.......:.......:.x...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -10335046 -83895356 +3008 chr4 + 190214555 22624530 22624529 22624571 42 TATATATTTGTGTGTGTGTGTGTGTGTATATATATATATATA chr4 - 94230402 19559286 19559285 19559327 74671076 74671075 74671117 42 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ...x.x...x...............:..............:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 3065244 NA +3060 chr4 + 190214555 22624531 22624530 22624582 52 ATATATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATAT---ATATAA chr4 - 94230402 40224670 40224669 40224724 54005679 54005678 54005733 55 ACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAA .:.x....x.............:..........x...:....:.:.---...... 46M3I6M 44/52 84.6% 55/94230402 0.0% 3/52 5.8% -17600139 -76630263 +3085 chr4 + 190214555 22624533 22624532 22624584 52 ATATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAAAA chr4 - 94230402 43600823 43600822 43600874 50629529 50629528 50629580 52 ATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATATTAAA ..:.......:.x.:::..........:....x......x:.......x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -20976290 -73254112 +3017 chr4 + 190214555 22624534 22624533 22624575 42 TATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 19559286 19559285 19559327 74671076 74671075 74671117 42 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA .....x.x.x.............:................:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 3065248 NA +3034 chr4 + 190214555 22624536 22624535 22624578 43 TTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 9151851 9151850 9151893 85078510 85078509 85078552 43 TTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ...xx.......................x....x.:....... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 13472685 NA +13976 chr4 + 190214555 22644765 22644764 22645260 496 GTAGAAGGATAGCGATTATAG----AACCTTTCTCAATTTTGCCAGTCAGACACCTTGAAGAAATCAATTAGTAGGCAAATTATTAACTAATTGAGCATTTAGAGTGTTCTTACTTTTGAAAAATCAATTAGGCCTTTGCCCTTAGTTTTGAAGCATTATTTCATTATTAATTGTTTTAAACAGCGGTTCATCTGCAGTGGATCCAGATCAGCTGACAGTTGTTTTTTGTTTATATTCTGTTCTTAATTGATTAATACAATGAGCTGAAAACCTTTAACATCATTGATCATGTCATGGAATGCTGAGTAATTGGCTGGCAAATGT-GATTTTTAAAAATTAATGATTCAATGGTTCAAAGG--AATTCAGTAGCAGATTGCAGTCAGCAAAAAAAGAGGATTT--------TCGGTATTTCTTCAACATGT-ATGATCTGAATGAT-----AGTTCCACCTCATTCTTGGAGCCAATATTTTTTTTATCTTCATTAGTGATAATTTCTTGTACTATA chr4 - 94230402 17198352 17198351 17198838 77031565 77031564 77032051 487 GTAGGGAGCTTGTAATTATAGTTCACACCTTTCT----TTTGCCAGTTAAATGATTCAAA--AATCAATTATAAAACAAATTATTAATTAAGTGAGCTATAAACATCTTTACTCTTTT---ATATCACTTAGGCTTCTTTCTTCCATGTTCAACCAATTATTCATTA---ATTATTTTAAACATCGCTTCATCAGTAATGAACTGAGAGCAGCTGACAGTTGTGTTTTG---------TGTTTATATTTGATCAATACAAGCAACTGAAAACTTTCAG-ATCATTGATCATGTCAGGTACTGCTGAGTAATTGGCTAGTAAAGCTGGATATTTGGAAACTGATGACTTAGTGGTTCAAGGGTCAATCCAGCAAACCACTGAAGTTAGCTAAAC---AGGATTTTATTTTTCTCTTCTTTTTTTCAGTGGGTGGTCTTCTGAATGATCCATGAGCTCATCTGTAGTCTT---TCTAGTGTTTTTCC--TCTTTGTTAGTAACACATTGTTGCTTCATA ....:::.x.x.::.......----x........----.........:.:.::x:.::..--.........xx.::...........:...x.....xx.x.:x:.x..:x:x.....---.x....x......:.:.x:.:.:x:.x..x..x..x.xx.......---...:.........x..x......x.:.:..:.::x...x..............x.....---------....:x..x.....:.......xx.:........:..:.:-................x.x.x................:.:...xx.-...x...::...:.:....:.:.:........:..--...:...:.:xxx.:..x...:...x...x---.......--------..xx:x...:....:::x..-:.xx..........-----..:..xx.:x:.x....---x.:.:.:.....::--....::.....:.:.xx..x...:x::... 21M4I9M4D22M2D56M3D46M3D59M9D40M1D46M1I35M2I30M3D7M8I20M1I14M5I17M3D14M2D30M 332/466 71.2% 487/94230402 0.0% 51/466 10.9% 5446413 NA +3245 chr4 + 190214555 22669233 22669232 22669284 52 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAATT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x.....:...:..:.:...............:.x.........:.:x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -70066119 -24164283 +3738 chr4 + 190214555 22675062 22675061 22675311 250 CCTCCCTCCCTCCCTCCCTCCCCTCCCCCCTTCCTCCCTCCCTTCCTC--CCTCCCCTCC----------------------TTCCTTCCTTCCCTCCTTCC----------CTCCTTCCTCCCTCTCTTTCTCTTTCTCTCT---CTCCTTCCTTCTCTT-------TTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTCTT chr4 - 94230402 14967246 14967245 14967542 79262861 79262860 79263157 297 CTTTTCTGCACTCCGCCTTGTCCGACTCCATCCCTCCTCCCTTTGCTCAGCATTCTATCCAGCCAGGGACAAGGCAAGAGCATCTCTTCGTGCCCTCCATGCAGCTAAGCAGCTCCCCATTCACTGTCCATGTTTTTCTCACTGACTTCTAACCCTCCCATAATCAGCTTCCCTCTTTCCCTTTCACCTTCCAGTTAATGCTTCTCTCCACTCTCACTCTTCAGTGCCATCAGATTTCTTTCCTGGTTTAGTCCCTCTCTTTTTTTGCCTTCTTTTCCCTCTTTCCTCTATTCTTCT .:.::..x.x::..x..:.x:..xx.:..x.:.....::..:..x...--.x.:.:x...----------------------.::....x.x......x.x.----------....::x:..x..x..:x.x.:......x..---:..:xx..:..:.x.-------...::......:..:..x......xx:.xx:x:..:::.:.x:...:x.....:xx.x.:x..xxx........:.xx...x-.::..:.....:...--...::....::......:.::x....::. 48M2I10M22I20M10I31M3I15M7I82M1I15M2I29M 154/250 61.6% 297/94230402 0.0% 47/250 18.8% 7707816 NA +4524 chr4 + 190214555 22675130 22675129 22675352 223 CCCTCCTTCCCTCCTTCCTCCCTCTCTTTCTCTTTCTCTCTCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCT--TTCTTTCT-----------TTCTT-----------TCTTTC----------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTC--CTTCCTTCCTTCCTTCCTTCCTTTCCTTCCCTTT chr4 - 94230402 85832816 85832815 85833071 8397332 8397331 8397587 256 CTCTTTTACCCTTCTACTCCCCTTTTTCCTGGCTTCTTTCTGCCCCACATCTTTTGTGCTTTATTTTTTCCTCT---TGCTCTTGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCTCTCACTTCCTTCTGGCTCTATCTAAAAGATGTGCTTCTCCTGAGTAGGAGTATTTCTGCAAATTAGTTTCCTGCTGTTCATTTTTCTTTTGTCTTCTTTCCCTTACGCTTGCTGTGTTGCTGCTTTTCTCTTATTCTCGTT .:..::.x....:..x.::....:.:.:::xx:....:...x:..:x.x.::.:.x.x....x...:.::....---.x..::.x...:x...x.:...::::x..:.x..:.........x:...:....--:...x...-----------....:-----------.x....----------....:.x..x.::x.:.......:x.::..........x--...x..x:x..x..x.:..:..:.:x...:.x.. 74M3D54M2I8M11I5M11I6M10I39M2I34M 141/220 64.1% 256/94230402 0.0% 39/220 17.7% -63157686 -31072716 +4129 chr4 + 190214555 22675134 22675133 22675276 143 CCTTCCCTCCTTCCTCCCTCTCTTTCTCTTTCT---CTCTCTCCTTCCTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTT-----TCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTC---TCTCTCTGTAGCTTCTTCTTTCT ...:...xx.x:x......::...:x.x:...x---:x..x...:.....:..:...:...-----......x..:...x.x..:.x...:xx....xxx:....x..............---...:...x.xx:.::........ 33M3I25M5D54M3D23M 94/135 69.6% 138/94230402 0.0% 11/135 8.1% -20406753 -73823649 +3095 chr4 + 190214555 22675178 22675177 22675261 84 CTTCTCTTTTCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTT chr4 - 94230402 18988809 18988808 18988892 75241511 75241510 75241594 84 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT ....x:.x.:.:..x.x.:.:x..:..::.xx.:..x.:............:....:.......x...x.xx:.::.x....:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 3686369 NA +3687 chr4 + 190214555 22675187 22675186 22675346 160 TCTTTCTTTCTCTCTCTCCTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTC-TCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTT chr4 - 94230402 45185590 45185589 45185749 49044654 49044653 49044813 160 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC---CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTT ..x..:.::....::..xx.::.xx:.....x:...x..........:::..:x...:..-:..:.:..........xx:....:.---......:x...--.x:....:x..x::.x.......xx::x..:::xx..::.:x...:..:..:::.xx:... 60M1I25M3D11M2I61M 96/157 61.1% 160/94230402 0.0% 6/157 3.8% -22510403 -71719999 +3095 chr4 + 190214555 22675222 22675221 22675293 72 CTTTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 90844561 90844560 90844632 3385771 3385770 3385842 72 CTCTCTTGCTTTCAGTTTCTTTCTCAGTGTTTTCTTTTCTTCCCTCTTTCTGTTTTGTCCACTCTATCTCCT ..:....x.....xx..........xx.x........::...::.......x.:..x:::x..:.x.:..:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -68169339 -26061063 +3921 chr4 + 190214555 22675245 22675244 22675436 192 TCTCTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCCTTCCTTCCTTCC---TTCCTTCCTTCC--TTTCCTTCCCTTTCT--------CTCTCTCTTTCTTTCTTTTTTTCACCAAACCTTACTTTTTTCCCCTAATCCTTCCTTCCCT-------CCCTGCTTCCCTTATTCAGTG chr4 - 94230402 91731746 91731745 91731941 2498462 2498461 2498657 196 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCA----------------TCTCTTAATACATCCATCCCCGCACCCGCCTCACCCCCCTCACTCACTG .:....x.........x::..x.....:...:::...:......::....xxxxx.:....:.x:..::...:....x::..x---..:x..x..:..--.:....x.x...x..--------.x...:.:x.:x...::..:.:..----------------..:.:....x.x...x....:-------..:::.::....:.:...x.. 83M3I12M2I15M8I24M16D21M7I21M 115/176 65.3% 196/94230402 0.0% 36/176 20.5% -69056501 -25173901 +3062 chr4 + 190214555 22693016 22693015 22693075 60 ATGGCTTTCCCTGCAGGATTTGGATGGGCGGCAGCCACTGCAGCTTATCAAGTAGAAGGT chr4 - 94230402 17214736 17214735 17214795 77015608 77015607 77015667 60 ATTGCTTTTCCAGCTGGATTTGCTTGGGGTGCAGCTACAGCAGCATATCAAATTAAAGGT ..x.....:..x..x.......xx....xx.....:..x.....x......:.x:..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 5478280 NA +3281 chr4 + 190214555 22726394 22726393 22726445 52 TTGTTTTTTTTTTTTTTTGGTTTTTTTTTGAAAGGGAAAAAAATTTTTTTAA chr4 - 94230402 62522631 62522630 62522682 31707721 31707720 31707772 52 TTGTTTTTTTTTTTTTTTGGTTGTTTTTTGAGAAAAAAAAAGTTTTCTATGA ......................x........:.:::.....:x...:.x.:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -39796237 -54434165 +35946 chr4 + 190214555 22735894 22735893 22736411 518 TATGTTCTTTTGGTGACAAATATTTACATTCCACATATGCCTCTTGATGTCAAGAGTGTAACTGTTTCATTTTCTTCTTTTTCTCAGGAGGCTGGGATGCAGATGGAAAAGGCCCTTGTGTCTGGGACACATTTACTCATCAGGGAGGAGAGAGAGTTTTCAAGAACCAGACTGGCGATGTAGCTTGTGGCAGCTACACTCTGTGGGAGGAAGATTTGAAATGTATCAAACAGCTTGGATTGACTCATTACCGCTTCTCTCTTTCCTGGTCACGTCTGTTACCTGATGGGACGACAGGTTTCATCAACCAGAAAGGCAAGTGTTTCTTAAAAATAGAAGGTTGCAGCTTTAATTCAAGGTTATTGCTGCAGTCTGGCATAATTAATCCAGTATGCTATTCTGCAATGTAGCTTTCAAATTGCAAGTTTTT--AGAGTGATTATGGGATAAATTTTTTGAAATGGGTTTGCATTAGTTTTCACAGTAATATTTTGGTTTTCTTTGACTGTTGAGATCTTTT chr4 - 94230402 17218967 17218966 17219481 77010922 77010921 77011436 515 TGTGCCTACTTTGTGATAAATATTTACATTCAACATATGCTTTTTGATGTCAAAAGTGTAACAACCAAGTTTTGTT-TTTCAAGCAGAAGGCTGGAATACAGATGGAAGTGGCCTTAATGTCTGGGACATATTCACCCATCAGGGAGGAGATCGAGTTTTCAAGAACCAGACTGGTGATGTAGCTTGTGGCAGCTACACTCTGTGGGAGGAAGATTTGAAATGTATCAAACAGCTTGGATTGACTCATTATCGCTTTTCTCTTTCCTGGTCACGTCTGTTACCTGATGGGACGACAGGTTTCATCAACCAGAAAGGCAATTGTTTCTTAAAAATAGAAGGTTGCAGCTTTAATTCAAGGTTATTGCTGCAGTCTGGCATAATTAATCCAGTATGCTATTCTGCAGTGTAGCTTTGAAATTGCAACTTTTTTCAGAGTAATTATGGGATGGTTTTTT----ATAGGTTTGCAACAACTTCCTAATTAATATTCTAGATCCCTTTGGATAGCACAATCTTTT .:..:::x:..x....:..............x........:.:..........:........x:::xx:....x..-...:xxx...:.......:..:.........:x....:.x:...........:...:..:..............xx......................:..........................................................................:.....:..............................................................x....................................................................................:.........x.........x.....--.....:..........::x.....----..:........x:.::..:.xx.x.......:.:.x.::.....:x.:x::x:....... 76M1D353M2I24M4D60M 443/513 86.4% 515/94230402 0.0% 7/513 1.4% 5516927 NA +10810 chr4 + 190214555 22740191 22740190 22740511 321 TTGGCCCTAGCTTTGGTAAAACCA--TGGCTGATTAATATTACAGACTTTGCTTTGAACAAGAGGGCACTGGAGGTGCATCCAGGAGGTGGAATTTCAATAAGCAGTTGTTCATT---CTTGTGCAGTGATCTGTTGAAGCAATTGGAATGGTTTTAACTTGGAAAGGCCATCTCTTTTTTCCCATTTAAATATTTTCTCAAAAAGCATGCGAAGAATTAGAAAATCCCTGTCACTGTTCTTCCCAAGGAACGACCTTTT------TGTGTTTGACTATCCATTTCAAAGCTTGATTATAGGACATTTGGAAACTTGTAAA---ATTCTGTGTCC chr4 - 94230402 17220890 17220889 17221217 77009186 77009185 77009513 328 TTCGCTTGATCTGTAGTATAAGCAGTTGCCTGATTAATATTATGAACTTTACATTTAGCGAAAGGGCACTGGAGAAACTCCAAGTAGGCTAGCTTTCATTAGGCAGGAGTTCACTTCTCTTGTGCAGTGATCTGTTGAAGCAATTGTAGCTGCCT-AGCATGGAAAGGCCATCATCTT----CTATATAAACATTTTTATAAAGAGCATGTGAAGAATTAGAAAGCTTAGAGCAATGTCCTTTCAAATAAA--ATCGTTCACACCAAGAGATTCTCTACCAATTTCACACCTAAAACAGAGGACATTTGAAAACCTTTACAACCATTCTGTTTCC ..x..::x.x..x.:...x..x..--..x.............:::.....:.x..x.:.:.:............:x:.x:.x..x...:x::x.....x..:....xx.....:.---............................x.::x.::.-.:.x.............x::..----.:..x....:.....:x:...:......:.............::::xx:x..x...:...:.x..x:..--.:.x..:------x.x.x..xx...:.x......x.x..x:.x:.x..........:....:.x..x.---.......x... 24M2I89M3I37M1D22M4D69M2D7M6I55M3I11M 223/314 71.0% 328/94230402 0.0% 21/314 6.7% 5519301 NA +3312 chr4 + 190214555 22741592 22741591 22741669 78 TGACAGAGCGAGATTCTGTCAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAAGAAACCGATGGTGTGAATGGTGTGAA chr4 - 94230402 64448670 64448669 64448744 29781659 29781658 29781733 75 TGGCAGGGAGAATATCTG--AGAGAAAAAAAAAAAAGAAAAAAGCAATAAAAGAGAGCGATGGTGAG-ATTATGTGAA ..:...:.x..:xx....--.:.:............:.:.....x..x......:.x........x.-..x:...... 18M2D47M1D10M 58/75 77.3% 75/94230402 0.0% 3/75 4.0% -41707078 -52523324 +46985 chr4 + 190214555 22747280 22747279 22749163 1884 TTCTTTT---TCCTCCTAGGAATTGATTATTACAACAAGATCATCGATGATTTGTTAAAAAATGGGGTTACTCCCATTGTGACCCTCTACCACTTTGATTTGCCTCAGACTTT-AGAAGACCAAGGAGGTTGGTTGTCAGAGGCAATCATTGAATCCTTTGACAAAT-ATGCTCAGTTTTGCTTCAGTACCTTTGGGGATCGTGTCAAGCAGTGGATCACCATAAATGAAGCTAATGTTCTTTCTGTGATGTCATATGACTT------AGGTATGTTTCCTCCGGGTATCCCTCACTTTGGGACTGGAGGTTATCAGGCAGCTCATAATTTGATTAAGGCTCATGCCAGATCCTGGCACAGCTATGATTCCTTATTTCGAAAAAAGCAGAAAGGTATGG---TGTCTCTATCACTTTTTGCGGTCTGG--TTGGAACCAGCAGATC--CCAACTCAGTGTCTGACCAGGAAGCTGCTAAAAGAGCCATCACTTTCCATCTGGATTTATTTGCTAAACCCATATTCATCGATGGTGATTATCCTGAAGTTGTCAAGTCTCAGATTGCCTCCATGAGTCAAAAGCAAGGCTATCCATCATCGAGGCTTCCAGAATTCACTGAAGAAGAGAAGAAAATGATCAAAGGCACTGCTGATTTTTTTGCTGTGCAATATTATACAACTCGCTTAATCAAGTACCAGGAGAACA-AGAAAGGAGAACTAGGTATTCTCCAGGATGCG---GAAATTGAATTTTTTCCAGATCCATCTTGG------AAAAATGTGGAT---TGGATCTACGTGGTACCATGGGGAGTATGTAAACTACTGAAATATATTAAGGTAAATGCATGATTT----TTTGTGTGTCCATGTACACCCAATTATGTGAAGGTGGGCAAGACAGGCATATGTATATATATATATATATATATGGACCTGAAAAAAGAATTACTTTAGGTAATAGCATATACATTTGCTGGCCTGGGAAGAGCAGATTAGGATTTGAGTTGATGAGGGGTAACTAGCCGGTAAAGGCTTCAAAAGCAGTGGTCAAAGTCTAGGATTTGTTGTTAAAGTTAGTTGTG-----GCTATAGAAGTAATTTGGACATATTTTTCAATCTGGTGTCACAACTATGATTATA----AAAGACATTTTAAGGATTGAGATA----------GTTGGATCCTTTTTTTGAGTCTCAGCTATAGTGGATGACATCCAGTTAGCTAAAATTAAAATTTCAATTACAG-------GTTTTC-------AGAACCCCTCCTATGGGGGATGTAGAATGTAGCTACTGGCAGGACTGAGGGGTTAAGGAGCAGTGACAATCAACAGATGCTGATGGAAGAAAGATATTTCTGTCTTCTCATTATAATAAGAGTCATTTGACTGTCTTCATGGACATTTGCACAGTTTTGCGTTTCCATTGTTAGTTATAAAAGGTCAGTGCATGGAAAATTAAGTTAATAGGGTCAGTGCAATTTGATGAAAACTAGTTTTGGGGTTGTAGCTTACAGAAGATAGAGGGTAATGTACCTGATTTTATGAGCTTTCTTTTTTTAAAACATCTGTTTGGAATAAAACTTCTGTTCTTTTTTTTTAGGATACATATAATAACCCTGTAATTTACATCACTGAGAATGGGTTTCCCCAGAGTGACCCAGCGCCTCTTGATGACACTCAACGCTGGGAGTATTTCAGACAAACATTTCAGGAACTGTTCAAAGGTACCATTTGAAATGATGAAAGATCAATTGTGCAAACTTAATATAATTTTCCCATTTGCTTATTTGCATTCAGCAAAGACCAATAATTTTTGAAAGCTGAAATCCATGTAAATCAATGCAAAGCCATATAATTAGGAGAGGGGGAAAAAGTATTTAGGAAAGAGGAAGTGGAGGA-TTTTGGCCTAGCTACAACCTCCTGAAAT chr4 - 94230402 17224033 17224032 17225803 77004600 77004599 77006370 1771 TTCTTTTCAATATTTTCAGGAGTCAATTATTACAGCAAAATAATGAGTAACCTGGCAAGTGACA-------TCCTGTT----CACAGTATTTCTTTGACTTACTCCAGTTTTTTAGAAGATGAAGGTGGTTGGAGATCTAAAAAGATCATTGAGACCTTTGATAATTTATGCAAAATATTGCTGCAAAGCATTTGAAGACTGAGTAAAGCTGTGGATCATTATTAATGAGCCTTATGTTGTTGCTA------CACATGGTTGTGGAAAAGGTATAGCCCCTGC---TACAACAGAATCTTGTACCAGAACTTACAAGGCAGTTCATAATTTGATAAAAGCTCATGCTAAAGCCTGGCACAGTTACGATAAGATAATTAGAGAAAACAA------TGTGGACCTGTGCCTATAACTCT----GAACTGAGCTTGG---CAGCATTTCTACAAATTCCGTAGCAAACCACGAGGCAACGGAAGGGAACCTGTCCTTTACCTTAAAAAGCTTTGTCAGAACAGTATTTATTTATGGTGAATATCAAGCCATTGTGAAGTC--------CTGCTACACGTTTAGTTCAGGGTTACTGATCATAAAGACTTCTAGAATGTAGTAAAGAGTTAAAAATGATGACCTTGCATACTGCTGACTTCTTTGCGCTGAATTGTT-------TCACTTAAG-----ATCAAGAAAACACAGACAAGAGG-CTA---ATTGTCTGAGTGGCATATGAGGCTAAGCAAACAATGGATCCCTCTTGGTCTGTTGCAATTGGGAGTCTATGGCTTGCTGAAGTACCATGGGGTTTATACTGACTTCTGTATTATATCAAAGTA------TGACATAAGGCTCACAGGACCATTTAACCACTACTA-------GCTGGCCAGTAAGG---------------------------GGATCTGAGAA------TCCTATGAATAATA--CTGGTGATTTGTTTTCTTTTGAGGAGCCCATCTGGAT------------GGCATAA-GACATTGTATAGGATATAAATAAACAAGTCAC--CTTGGGATTCTTAATTTAA--TGCTTGCGTGCCAGCTACAAAAAG----TAGAAGCCTTATT-------GTTTCCCTACTGCCTTTATACTTGATAGCTATTTTACAGTTTGAAAAGAAATACCAGTGTTTTATCATCTTTT-------CAGCTCCA---------------------AAAATTATCTTTTTCATGCCAGCAGTAAGGCATTCTTGGCATGGATCTACTCCT---GGCAATGGGACTTCTGGTGACTGCCAGTACCAAGGGGTTAAGGAGCAGTCACAATAAGCAGATGCTAATGCAGGAAAGATATTTTAGACTTCTCATTAAAATAAG--TCATTTCACTGTCTTCATGGATATTTGCACAGTTTTGCTTTTCCATTGTTAGTCATAAAAGGTCAGCTCATGGAAAATTAAGTTAATAGGGTCAGTGCAATTTGATGAAAACTAGTTTTAG--TTTTAGCTTAGAAAAGATAGAGGGTAATGCATCTGATTTTATGGGCTTTCTT--------ACATCTGTTCTGAATAAAACTTCTGCTCTCTTGTTCTAGGATATATATAATAACCCTCTAATTTACATCACTGAGAATGGGTTTTCCCAAAGTGACCCTGCTCTACTTGATGACAGCCAACGATGGGAGTATTTCAAGCTGAATTTACAGGAAATTTTATAAGGTACCATTTGAGATGCTGAAAGATCAATTGTTCTAACTTTATATAATTTTCCTTTGTGCTTATTTGCATTCAGCAATGACCAGTGATTCTTG-AAGCTAAAACTAATGTAAATCAGAGTAAAGCGATGCCATTAGAAAA-----AAAAAATGTTTACCAGAAAGAAAAGCCAGTAGTTTTAATCTTGTTTCCCCATCTTGGGAT .......---.x:.:::....:.::.........:...:..x..x::.:.::..x:..:x:.::-------...::..----.x.xx..::x......:..:.::...x:...-......:x....x......xx:..x:.::x:........:x.......:..x.-....xx.:.x.....x..:x:.x....::..::.x..x....x........::..x.....:x..x.....x..x..:------..:...::.x------......:x::...x.---..:xx.xx.x.:.x.x..::..:x...:x......:............x..:........:.:.x..........:..:...xxxx..x..x..:....xx.------.:...---...x:....x...:.----.:x...:--....---.....xx..--.x..:..x..:x.x:....x..:..x:.x:..:.::x.x.xx.:..:xx::.::.xxxx....::.:.x.x:....:..:x.......x....xx.xx:....x.....--------.:x.:.::x..:x.:xx..:..:..::x.....x:..:....:.....x:.x.:....:xx:..:.x:....:.xx:x::........:..:.....xx..x.x.:..-------..:.....x-----.:..:..:....-...x.:...:-...---...x..:::.xx..:---..:::.:.::xxx:xx::.....x......------:x..x..x.::.---...x.:xx:.x:...........xx...::x:...x...x.x.....:..:...------...:x.----:.::::x.x....x..xx.x.x.:..-------.:x...x..xx...---------------------------...:....:..------.x..x.:::.....--x.:xxx.....:.xx.:.xx..:....xx..:x....------------..x:...-x.xx:x...x...x.x:...x:x.xx:....x--::.:.....:x.x:..x..--.:x...:.-----....:.:..:x----.:..x::x..x..-------..x..x.x...::xx.....----.x..x:......x:.x....:.x:----------...xx...x.:....-------.....x:.---------------------.......xxx...:x..xx...-------.:x...-------:..x.:x.....---..x:...x::xx.x.:.:x....x...x..::.................x.....x.:........:...x.:...........:x.x..........x......--......x..............:................x..............:............:x...................................................:.--..x.......x.:................:.:...........:........--------.........:x..............:...:..x..:.......:.............x..........................:....:........x..x.:x..........x:.....x.............::.x:.xx..x......x.x..xx..............:...x...............x.x.....x............:x.x....................x.....:.:...:...-.....:...::x..........:x.:.....x..::x.....:.:.-----.....:.:....xx.:.:..:..:xxx..x.-....:::..x.:.x.xx.x..:..::.. 7M3I54M7D7M4D31M1I53M1I78M6D10M6I15M3D102M6D5M3I15M4D7M2I4M3D9M2I109M8D108M7D9M5D12M1I10M1D3M3D15M3I30M6I12M3I54M6D6M4I26M7D14M27D11M6D14M2D37M12D7M1D32M2D19M2D8M5I11M4D13M7D20M4I24M10I15M7D8M21D22M7I6M7I12M3D105M2D121M2D52M8D255M1D46M5D31M1I28M 1193/1702 70.1% 1771/94230402 0.0% 251/1702 14.7% 5523247 NA +3775 chr4 + 190214555 22774988 22774987 22775049 62 AAATGGCAATTTCTTTTACTGAGATTCTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTT chr4 - 94230402 17488376 17488375 17488437 76741966 76741965 76742027 62 AAGCAGCAGTTCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT ..:::...:..::x...::.x:.x..:................:.................. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 5286612 NA +3046 chr4 + 190214555 22777453 22777452 22777517 65 ATCTCAAAATAATAATAATAATAATAATAATAATAATAATAACAATAATAATAAAAGATGTAGTA chr4 - 94230402 24074972 24074971 24075036 70155367 70155366 70155431 65 ATCCCAGAAAAGAAATAATAGTATCAATTATAATATCAGTAATAATGAAAATAACAGCTGCAGTA ...:..:..x.:x.......:..x:...x......x:.:...:...:.x.....x..x..:.... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -1297519 -92932883 +3130 chr4 + 190214555 22785551 22785550 22785592 42 ATTTAAAGCATTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTT chr4 - 94230402 51296807 51296806 51296848 42933555 42933554 42933596 42 ACTTACAGAAGTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTT .:...x..x.x............................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -28511256 -65719146 +3252 chr4 + 190214555 22801588 22801587 22801693 106 CTGCCTCCAACCTTTCCC---TCCTTGCTCCCTTCTTCCCTCCCTTCCTTCCTTCCTTTCTTTCCTTTCTTTTCCTTTCCCTTCCCTTCCCTTCCCTTCTCCTCCCTTC chr4 - 94230402 86872053 86872052 86872159 7358244 7358243 7358350 107 CTAATTCTAATCCTTCCTAGGTCCT--CTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCCCCATCTCAGCCATGGTCTCCTTTTC ..:x:..:..:.:....:---....--....x..:...:...:....::.....x..:...:..xxx..::...::..::..:...x..:.xx..x.xx..::.::... 18M3I4M2D82M 67/104 64.4% 107/94230402 0.0% 5/104 4.8% -64070465 -30159937 +3333 chr4 + 190214555 22801605 22801604 22801672 68 CTCCTTGCTCCCTTCTTCCCTCCCTTCCTTCCTTCCTTTCTTTCCTTTCTTTTCCTTTCCCTTCCCTT chr4 - 94230402 9693767 9693766 9693834 84536569 84536568 84536636 68 CTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..:...x...:.:::......:::...:.:x......x.:...x:.x.:....:.........:..:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 13107838 NA +3101 chr4 + 190214555 22806416 22806415 22806472 57 CCCTCTTTGCTCCTTCCCTTTCTTCCTTCCTCTCTCCCTCCCTCCCTGCTTTCTTTC chr4 - 94230402 93339678 93339677 93339734 890669 890668 890725 57 CTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTC .:......x....x...x:..........:x.:.......:::.:....:::..:.. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -70533262 -23697140 +3012 chr4 + 190214555 22815325 22815324 22815396 72 TTTGAGATAAATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 35241739 35241738 35241810 58988593 58988592 58988664 72 TTTGTCATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTT ....xx...:x....x..::x...xx.x.:..:.x......:..:.:.:...........xx...:...... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -12426414 -81803988 +3636 chr4 + 190214555 22815327 22815326 22815400 74 TGAGATAAATATATATATAT-ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681909 8681908 8681983 85548420 85548419 85548494 75 TAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .:.:..::....x:..:.x.-.....x..........:...::.:.:.:...:.....x:.:............. 20M1I54M 55/74 74.3% 75/94230402 0.0% 1/74 1.4% 14133418 NA +3008 chr4 + 190214555 22815341 22815340 22815394 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 14133411 NA +3222 chr4 + 190214555 22815343 22815342 22815396 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 14133413 NA +3014 chr4 + 190214555 22815345 22815344 22815403 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -19942510 -74287892 +3305 chr4 + 190214555 22815345 22815344 22815398 54 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 14133415 NA +3068 chr4 + 190214555 22815348 22815347 22815403 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -69920000 -24310402 +3282 chr4 + 190214555 22815350 22815349 22815405 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -69919998 -24310404 +3496 chr4 + 190214555 22815352 22815351 22815407 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -69919996 -24310406 +3282 chr4 + 190214555 22815354 22815353 22815409 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -69919994 -24310408 +3068 chr4 + 190214555 22815356 22815355 22815411 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -69919992 -24310410 +3121 chr4 + 190214555 22815356 22815355 22815409 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 18615082 NA +3479 chr4 + 190214555 22815456 22815455 22815545 90 TGGCATGATGTCGGCTCACTGCAACCTCTGCCTCCCAGGTAAAAGTGATTCTCCTGCTTCAGCCTCTCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......x....:------..:..:..:xx:x..:.::...xx.....x...x.xx.x:.......:............:......x.... 12M6D72M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 4618342 NA +28237 chr4 + 190214555 22820619 22820618 22821476 858 TATTTCATTCCTTTCCTATCCAGCCTGTCTTTTTCATTTTTACCATGTATCTTATTTACAATTTA-TGTGCCCTTTTGTATTATCTTGCA--AGACAACTGAGTTTTCCTTTTAATTAGGATG-TTGCTTCGAATATTACTTATCCTACAGGGCATATTTACAAGTTTTACAACAATACAAATGAGCACTGTATTTTTGTTACCAAAACCAAAAAAATTAGTATTCA-CACTGTAAATAAGACGATCTGTCATGTTTGGTCTACCAGGTGAAATAAAGATTCTAGCTGCTGGCGCCCAAGCTTACTTACAGTGCTGTGGCCTTCTGCAGTTCTTTGCTGGATTTTAAAGCCCAGCTCTTTATCCTAGAGATGGATCATACAAAGGGTGCTTCCCTAATTGGTCATGTAAATTAGTATTGCCACAAGGTTAAGATGAAGGAAAAAAAAATAACTCACCATCTAAAAACCTAACAG-CCCTGCAGTATTTCAATTAATGTTATTTTTAATTACTTACATTAGCATTTGAGAACAAGACTGATTGGCTTTTGCCTGTTAAGGAAACAGAATGAAAATTCTTTAAATA--GAAAAACAAGTTGTTAATTATACTTAAAAATCCACAGATACTGTACTTAGATGTCTTGAAGGTCATCTGAGACTTGTAAAGCACATGTTTTATGTCTGTTTTATCTAAGGAGAAACCTAGGTATCACAATGATGAATTGGATCTATTTGTATTTCC----TTCTCTGTTATTTTCCTCCTTTCTTTTTTAGAAGAGTATGAACACATGTTATTTACATTCTATGAATCACTTTTAA---GAAATTTTTTTGACAG-GTTTTATTTTAGGGCAAGTCATTTCTGAATTT chr4 - 94230402 17255184 17255183 17255970 76974433 76974432 76975219 787 TATTTTTATCTGTTCCTCT---GGTTGTCTTGTCCAGGTTTA-----TAACATATTGTCAGTTTACTTTTCTCTCCTGTGTT---TTGCATGAGACAGTTATACTCTCCT---AATTAGGACAACTGGGCAGAATATCATCTATCCTA-------TATTTGCATGTTTTACAACAGTTCAAATGGGCAACGCATTTTTCTTGC---------AGAAATTAATATTCTTCATTGTAAACAATATAATCCATCATATTTGGTGTACATGGTGAACTGAATATCCTGATAGTTAGCATGAAAGCTTACTGA-AGTACAGTGACCATCTGCATCTCTCTGTTGGGCTTTAAAGGCCAGTTCTCCCTTCTAAAGATTTATAATACAAAGGGCAATTCACTAATTAGTACTGTAAATTAGTGTTGCCACGAGGTTAA---------AAAAAAAA-------------AAAAAACTAACAGTCCCTGCAGTATTTCAATTAATGTTATTTTTAATTGCTTGTATTAGCATTTGAGAACAAGATTGATTAGCTTTTGACTGTCAAAGAAACAGAACTTGAAGCTCTTAAATACTGAAATGGAAGTTGTTAATTATATTTAAAAATCCATAGATATTGTACATGGAAGTCTGGAAGGTCATCTGAGTATTAAAGAGAGTATGTTTCATTTCTGTTCTGTTTAAATAAAAATTTTA-------AATGTTTGCATAGAGCCACATGTATTTCTCGTGCTCTCTACTAAT--------------------------TGATCACACA-AATTAACATCTCCAAAATCACTTTAAAAACAAAACAGCTTTAACAGTGCATCTGTTTATAGAAAGTAATTTTAGAAGTT .....:xx..:x.....x.---.x:......x.:..xx....-----..x.x....xx..:....-.x.x.:..::...:..---.....--.....::.:x::.:....---........::-:..xx:x......:.::.......-------.....:..x...........:.x......:...x:.:......x..:.---------.:......:.....x-..:......:..x.::...::....:......x...xx......x.:..x..:..:::x.:.:..::xx.........x.-...:.x...:..x......x:...:..:...::.......x....:...::x.:...:....xx..x..........::x...x......:..xx...........:.......:.......---------........-------------.....x.......-..................................:...::....................:.....:.......x....:..:.........:xx:..x:::.......--....x:x...............:...........:.....:.....x.:..x....x..............xx..:x.:..x::......:..x......:.:.:...:x.:...::.x:-------....x.x:xx.:..x.:.:x........:----:.....::..x.--------------------------...x....::-x...x....:::xx:.........x..---:...:xx:...:....-.:x.:xx....x:.x....x....:x...x.. 19M3D20M5D18M1I16M3D5M2I18M3D10M1I24M7D48M9D15M1I80M1D122M9D8M13D13M1I109M2I120M7D29M4I12M26D10M1D27M3I16M1I32M 571/771 74.1% 787/94230402 0.0% 103/771 13.4% 5565435 NA +27754 chr4 + 190214555 22829694 22829693 22830494 801 TGCACAAATTAAAATAACAGGGCTAAGGGGGAAAATATCTCTATAAAAGGCTTTATGACTCCAGTGGATAATAATATCCTTGTCACATTAGGATCTGGGGACCTAGAGATATAAGAAGGTCTTTTTCATTGTTATTGTTGTTTTCACAGCATATGAGCCTTCTTTTCTCCACTTCAGCCTGTGGAATAAATTTATTCTTGGCTGCTTATTTTATGAATTTGGATGCTATGTCAAAGCATTGTATTGTTTCTTATCAAGAAAGTA--GAAAATAAGGTCTGCATCATTGTCATTTATTGGCAC-CTGATA------AGATTGATATCATCTAAAAGCTCCATTTTGGCTAAATGTATCAAATGTGTAAGTTCCCTGTAATTTGTGTGGGATTTTGTAGGCACAA-----GTTAATATAGCTGTTTTGATATAGCATGTACAAAGTATTTAAATACATATCTCAGTTTAGAATAGATTCATTAGAAAGGGCAGAATAGGGAAAAAAAGCTGTCAGCACAACTGATGTTCATTTTCTAGGGTGACAGAATTCAGAAGTCCCAAGGACTGTAGCAGTTGGATAGCTAATGCTGCATATCGCAGCCCTATCCACAAAGCAGGCCCTACTCATTCATTGGATGGCAGCTGCAAGTTTAAGACTTAGGCTACATTTTCCTAATTCCATGAAAAAG-GCAACATGAGCAATGGGCTGTCATGTATTTGAAAATTATGCCATGTAAGTAAATAAAGACATAGTTCATAATTCCACGAAAGGTTGATGGCAACATTTATTCCAGAATTAGGCAATAATGAAACAGA chr4 - 94230402 17259509 17259508 17260271 76970132 76970131 76970894 763 TGCACAAATTAAAAGGGAATAGCCACAGGAAAAGATATCTCTACAGAAGACTTTATGTCAAGAATGCATAATAATAGCCTTGT------------TTGGCAATCAAAAATACACTA--GTCTTTTAC--------------------------TGAG---TCTTTAGTGAACTTCAGCATTAGTAGTGAATTCTGGTTTGGATACTAATTTGATGCATTAGAAAACTATACCATAGC-CCACTTTGTT-CTTGTCATGAAAATATGGAGAGTAAGGTCTACAT-ATTG--ATTCTATGGCAAGCTGACATCCAACAAATTTATGCTATTTGAAAACCCTATTCTTGCTAAATGCATTGCATATGTAAGTTCAGTGTAAATTACTTGGAACTTTGCTGCTCCAAATAATGTTAATATCTCTGTTTTGATATGACATG--AAATTTATTTAATCTGCTACCTCATTTTGAAATATATTCATTA-AAAGTCTTGAATAGAGGAAGAA-TCTGTCAGTACAAATGGTGTTCATTTTC-AGTGTGACAGTATTCTCAAGTTCCAAGGAATAGAACAGTTGAATAGATAATGTCACATATCATAGTTTTATTCAGGTGGTGTGATCTCCTCATTGATTGGACAGCAGTTGGAAATTTAAAGCTTTTGCTACATTTCACTAATACCATGACAATGAGGAACATGAGCAATGGCCTGTCAAATGTCTGAAAATTGTGCCATGCAAGTAAATAAAGACACAGCTTACAATTCTCTGCAAGGCTGAGGATAACATTTGTTCTGGAATTAAGCAATATTGAAACAGA ..............x::x.x:..:.x:..::..:.........:.:...:.......x.xxx.:..x.........x......------------.x..x.x::.:.:...:.xx.--.......x.--------------------------....---.....xx.xx........x.xx.x.:.:....:xxx:....x.:..x....x...x...x.:.x:....::..x...-::::x.....-...:...x....:..--..:.:........:...-....--...:xx.....x-....:.------.:...x..:::..:.:...:.:.:...:.x........:..::x..:.........xx.....x..::x...:.:....:x.x:x...-----........xx............::....--x..xx.......x:xxx..:....x...::....x........-....xx:x......:.:..:..-x.......:....x..:...........-..x.......x....xx....:.......x.:x.:......:....x.....:::......::..:::...:..x:x:.::x.x:..x......x......::....:..x..:.....::...xx.........:x.....x......x..x.-.x..............x......x:.:.:........:.......:...............:..:.:.:.....:x:.x....:...x.::.......:...::......:......x......... 83M12D21M2D9M26D4M3D77M1D10M1D15M2I17M1D4M2D12M1I6M6I88M5I28M2D43M1D22M1D28M1D154M1I127M 544/748 72.7% 763/94230402 0.0% 68/748 9.1% 5570185 NA +8404 chr4 + 190214555 22840282 22840281 22840853 572 ACAAAAACAAATAACAAGCTATTT--------TGGCTTTGTGAAGCAACTCACTTTTATTGATGAGCTTTAAAAATCCCAGCTGCCATTCTTATTCTC-TGGCATATT-TACCTATTGTACAGTTACTTTTATCCAAATGTATTAGGA-----TTTTGAAAAAAAATTAAACTGTAAACCAAAAACCTTTCTATTATTATCAGCTAAAATCAAGGTCCCATATTTTATTGACTGTCAACTATCTAATGTGCTTTATCTCTAGTCTCAGCTGGGCCCT-----CCCTGACCTGAGCTGTTCCAGGAGAAATGGGCAACTCTGAACGCTGGTGAAAATTGGAACATCAATGTGTCCTCGAAGCAAATCTGTGAAGTGTCCTGGGAGAACTGCAAA--ATTGAGAATCCTTTCCGTGAGGTATCCTGAAATCCTTTATTTGGCCATTAAACTGTTCATAAAACTT-----ATTTCAAGTGGCGACAGAAAATCATTGAGA--AAGATTCCTTCTGTCCAGCAATGACAAAGAAAACATCCCTGCATATTGGTTGTCCCGGTCATGGTTGTT-CTGAGCCCTGGGTGAATGCCAAATGACTGGCCA chr4 - 94230402 17262485 17262484 17263059 76967344 76967343 76967918 575 ACAGAAAAACAAAATAAGCAATTTGAGTCAATTAGGTATGTGCTACAAGTCATTCCGCTGCATG--TTTTACAAGT-------GAAATTTTCACTCTCCTGACACAGTGTATATATTCTGCTAAGACTGTT---CAAATGGGTTATGGCTTCCTTTT--------CTGAATCTGTAAAATAGGCATCCCTCTATCCCTGGCAGCAGCAAATGAGGCCCAGTATTTCTGCTGCTGTTTGCCACTCTACGTGATCTATCCTTCATGCAAGCAGGGCACTGGTGATGCTGA--GGAGTAGCTCCACAAGAAAAACAAGACTCCTAACCTCAGCAAAACCATTCAGCTGTGTGTGCCTTGGAGTCACAGCTGTGAAACACATCAGGAGAGCAGCAAAGCATTTCAGTTCCT--CTATGGGATATCAAGGGATCCTTTATCTTGCTAC--AACCATTCATAGGCCCCTATCACTTTTAGATGATGGCAGAAAATCATTGGCTCTAAAGTCTCTACTGTCCAGCAGTGACAAAGAAAACGTCGTTGCGTATCAATTGTCTT-GTGGCAATTGTCACTGAGCACTGACAGCATGCAAAGTGCACTGCCA ...:...x.x.x..:....x....--------.:.x.x....xx:...x...:.::xx.xx...--:....x..:.-------.xx...:.:.:....-..:..:.x.-..:x....x.:.x:xx...x..---......x:...x.:-----....--------x.x..x.......x:.::x.:.::.....:x:.:x....x:x..x::...:..x:.....:xx:x:....:x:.:.:::x.:...x.:....::.x:.x:x...x....x..-----:x....--x...:x.:....x:.....x:x:x:....:x...x:::.::...x:xxxx.xx.xx:....:.:.x..:x..x.x.......::::x:::.....:.x.....--...xx::x....--.::..:.:....xx.::.........:.x..:.:--...::......::x.::-----x...:.::..::.:.............:xx--..::.::..x..........:.............:..x:...:...:::.....::-..x::::....:-......x...:xx.x....x..:..xx:x.... 24M8I32M2D10M7D15M1I9M1I22M3D14M5I4M8D112M5I6M2D103M2I12M2D34M2D17M5I30M2I56M1D12M1I33M 334/545 61.3% 575/94230402 0.0% 57/545 10.5% 5577797 NA +9633 chr4 + 190214555 22841988 22841987 22842309 322 TTGATT--AAAACTTGACATGAGCAAAGTTTT----TATTTTATACAGGATGAAATATATGCAAAGGACCATGGCTTTGTCACGATCATAGTTTATATTCTTGAAGTTTGGATCTAATTTTTGATTTAGGCACTTTGCTCTC--AATGAAATATTATGTATTATAATGTAGTAG--TTAATAAGATCTGATACAGTGACTTTAAATTGAATTTCA---TTAAAAAATAAGAGCAT-AAAATGTCTTCTTAATAGTCTTAATTAGGGAAAATGGAAAACCATAGTATTTCTATATTAATGCACTAACTAAGATAATTGGGATAATATAAAATATATA chr4 - 94230402 17263269 17263268 17263593 76966810 76966809 76967134 325 TTGATTTAAAAACTTCACACAAGGAAAGTTTTGCACTGTTTAAAATGAGATTGAAAA---GTGAAAG-CAGTGGATTTTTTTTTATC------TGTATTATCAAAGTATAGGGTTGGTTTT-GATTCAGTCTTTTTTTTTTTCTGATGAAACGTTTCATGTTGTAATGTAATAGAATTAATAAGATCTGATACACTGACTTTTAATGAAATTTCATTTTTCAAAAATAGGCACATAAAAATGTCTCCATAATAAACTTAATTAGAGAAAATAGAAAATTGTATTATTTCATCATTAATACAAAGAGATGGATAATTAGGAGGGTGAGATATGCATA ......--.......x...::..x........----.:...x.x.:::...x:..x.---.::..:.-.x:...x...x.:x:x...------.:....x.::....x.:.:x:.::....-....:..x.x:...x:.:.:--:......::..x::.:..:.......:...--..................x.......x...x:.......---..x.......:.x:...-.........:.x.....:x.........:......:.....:::..x......xx:......:..xx:.xxx:.......:...x::.:x:.x..::... 6M2I24M4I21M3D7M1D19M6D28M1D20M2I30M2I39M3I17M1I100M 220/311 70.7% 325/94230402 0.0% 25/311 8.0% 5578719 NA +4174 chr4 + 190214555 22846752 22846751 22846902 151 TATATTAGAGTCTGCCACTTTAAAAATAACCCTTGCAGATTCAAGTTGACGTCT--TTCCACTAGATGGTTTGATATGACTGTGGCTTTCATCTTTGTATAATAGAGTATTATCTGGTTACAACACATAATTCAATTAACATTATCCTTTAAA chr4 - 94230402 22534827 22534826 22534979 71695424 71695423 71695576 153 TGCATTACAGTCTGGTGCTTAGAAAATAAACATCTCGGCTTTGCCTCAGTGTTTATCTCCAATAAATACCTCAGCTTTGCCTCAACAATTATCTCTTCACAGCAGACCATTATCCAGCAGCAACATATAATTCCATTAACATTACCGTTTAAA .::....x......x::...x:.......x.x.:x.:.x..::xx.::::..:.--:....x..:..:x:.::::x.x:.:x:::.xx.:....:.x:.:.::...x:......::.:x:.....:.......x..........:.x...... 54M2I97M 90/151 59.6% 153/94230402 0.0% 2/151 1.3% 311925 NA +4174 chr4 + 190214555 22846752 22846751 22846902 151 TATATTAGAGTCTGCCACTTTAAAAATAACCCTTGCAGATTCAAGTTGACGTCT--TTCCACTAGATGGTTTGATATGACTGTGGCTTTCATCTTTGTATAATAGAGTATTATCTGGTTACAACACATAATTCAATTAACATTATCCTTTAAA chr4 - 94230402 22530569 22530568 22530721 71699682 71699681 71699834 153 TGCATTACAGTCTGGTGCTTAGAAAATAAACATCTCGGCTTTGCCTCAGTGTTTATCTCCAATAAATACCTCAGCTTTGCCTCAACAATTATCTCTTCACAGCAGACCATTATCCAGCAGCAACATATAATTCCATTAACATTACCGTTTAAA .::....x......x::...x:.......x.x.:x.:.x..::xx.::::..:.--:....x..:..:x:.::::x.x:.:x:::.xx.:....:.x:.:.::...x:......::.:x:.....:.......x..........:.x...... 54M2I97M 90/151 59.6% 153/94230402 0.0% 2/151 1.3% 316183 NA +15366 chr4 + 190214555 22846860 22846859 22847414 555 TATCTGGTTACAACACATAATTCAATTAACATTATCCTTTAAATTTCTCCATCCTTTGTTGAAATGCTTAAATTTATTCCTCTTTTATCCTCGCCTCTCCTTTTTCAATCTTGGAGACTACTGTCATTAATCTATATCTTTTGAGGTTATCATTTCACTTTA--GCTAGGAAGCATTTCATTCTTATCAGCATCCACAGTGCATCATCTGGGCTGTTCTTCTGTATATTGTGTATTGCCATCAATATTCCATCCTTATATATTTTTAATCTCCGCCAAGAATGTTGTATCATCTTCATTTCTGGTCAGATAAAATAAATGTTTCA-TTGGATATGTAAATGATCCTGTGAGCTAGATGAATTTAGGAG-GTTTTGCTTTCAGTGTTGAAATAAGATCTT--------------------TATCCTTAAATCAGACAGTATGGAAACAAATGAAATGTTACATGCTGACATATTT------TTAAATGCTATTTTTTTTTAACCTCCCCATGAAAAAAATGACATCTGCAAGTTAGGATTTGCTTTGGAAAATGAAGTCTTTTCATTTATTTACAAAAAAAAAAGG chr4 - 94230402 17265718 17265717 17266258 76964145 76964144 76964685 541 TATCTGGCTACAATACATAATTCAATTAGTATTATCCCTTAAATGCCTG-----TCTGCTGAGTTATCCAAACTCATTCTCTGTTTACTCCTGTGGTACCCTCTATAGATGCATTTCCTATTGCCATCCATCTCTATCTTTTTA---TGTCATTTTACTTCTCTGCTAGAACCCATATAATTCTTATCAGCACCCATAGTACATCATC----CAATCCTCTTTTATATTGTATGGTGCTATCAGTATTCCATTCTTATATATTTTTAATCTCAGACAAGAATATTGTATCATCTTTACTT-TGCTCTGATAAAAGAAATGTAATATTTTTGTATGGAAACTATTCTGTAATCCACATAAATATACAAGAGATTTGTTTTCTGTATTGAAAAGACGTCTTTTTTTTTTTTTTTTTTACCGTATCTTTAGATCAGA--------AAAGGCATTACATTTT------TAACATATTTTTCTCCTTAAAGGATGAATTTAGTG------CTCATGAAAGCTGCCACATTGACA-----------GCTCTGAGAAAAGAAGCCTATTTAATTGGCTGTGGAAAAGATAAG .......:.....:..............::.......:......x:..x-----.:..:...:x.::::...:.:....:::x....::.::.:xx:x..:.:.x:.:x:x::xxxx...:..:...:x....x........x.---.:......:....:x--.....:.xx...x.x.............:...:...:.......----.x:.:..::.x........:.:x...:....:........:...................x.x.......:............:.:..-..x..x.......x......xx:.-..xx:....x...:x..:....:.x.:.x..:...x..x:..-.x....:....x..:......x:.x:....--------------------....:...:......--------...x:x..x.x..x..------.:........------.....x.x.:xx...xx.x------.:.......:xx::x....:x:..-----------...:..::...x....:..x..:.x..:x:.::::....:.x.:. 49M5D90M3D15M2I44M4D88M1D24M1I42M1I30M20I15M8D16M6D10M6I19M6D24M11D45M 357/511 69.9% 541/94230402 0.0% 74/511 14.5% 5581142 NA +22770 chr4 + 190214555 22849756 22849755 22850208 453 AGCAGGGAATACAGGGCAAGCCAGCTCTTGTTTTTAAATGTTATGCCCAGAAGAGATCTTTGAAATTTTATAAACAGATGGATTCTTTTTGCTTGATTCGCTAATGTTTTACAATTAACTAATTAACAGGTTTATTGCCAAAATTAGCAATAAAAAGTGTTCAGGAGCTTCGACCAAAGCAGTCTTTTGCAATTACATAGTTACCAAAACAATCTGCATGATAGTTTGAGGCTAAACGTTGCTCAAATCAGAATTTCACCTGCTGTTTTCAAATAAAAGTTGACAAATACAAAAATGAACCCTGTAGATTTTCAGACTCCTTTCATATACACAAGCCTCTGCCTTAATTAATAATAATTACAGGTAACACAAACTATAGTTGGAAGGCTTAAATGTACCCAGATTGCTTTCAAGTGTGCAAAACTGCTTAGCAAACACAGTTCTGAAGGACTA chr4 - 94230402 17266690 17266689 17267128 76963275 76963274 76963713 439 AATAGGTGATATTGTGTGTACCA-CTGTGGTTCGTAAATGTTATGCCCAGAAGAAATCTT----ATTTTATAAACAGATGGATCCTTTTTACTTGATTCAGTAATGCTTTACAATTAACTAATTAACAGGTTTATTGCCAAAATTAGCAATAAAACGTGTTCAGGAGTTTTGACCAAAGCAGT-TTTGGCAATTACATAGATA-CAAAACAATCTGCATGATAGTTTGAGGCGAAATGTTCCTCAGATCAGAATTTAACCTGCTGTTATCAAATAAAAGTTGACAAATAGGAAACCAAAGCCTGCAGATTTCCTTAACAATTTCAAATTTGAGTACCTCAGTCTTAATTAGTATTAATTACAGGTAATGC-AACAACGGTGGGAAGAGCTGATTATGC------TTTTTCTAGACAAACAAACCAGTTTAATATTCTTCACTTTGATGGACTA .::...x:...:x.x.::x:...-..x.x...:x....................:.....----...................:......:........:x.....:................................................x...........:..:............-...x............x..-............................x...:...x....:..........x..........x.....................x:...x::..x....:......:.xx.x:xx.....x..x::x:x:....x.:........:..x.............::.-...x.::..x.....:x:.:.x.:.:.------.x:..::.::::x:....x.x.:...::.xx.x:x::.:...x...... 23M1D36M4D119M1D19M1D166M1D27M6D49M 344/439 78.4% 439/94230402 0.0% 14/439 3.2% 5583066 NA +41571 chr4 + 190214555 22859828 22859827 22860858 1031 CAGAACTTGGTGAGCCAGTGCTTCTGAAATACAACTTATCCCATTTTCTACTTGCTAACAAGGCCAGCGATCCATGAAGTTGATTCTTTTTTGGGTTTTGGTGCCGGAGCATTTAAATGAATGGTTTGAGAGTAAAGTCTATTACTGTATGCAGCATAGCCAGCAATTGTTTAAATTCAGAATAAAGTATGGATAGAGTTACATTTTCCGTTTTCAAGGTGCCTACCTAGTACTGTGATTGGCAACTCAACACTGCTTTCCTGTTCCCTATTACAAGGTGTAGCCAGAAACACAAATCTTTAAGGGACTC-TGCCGCTTACCATCTGCTTGATACTCAGGGTCTCCAAATGGCCCCAAAAGGTGGTGGCTGTTT-GCAGCACTCGGACTTTTGAATTATATTAAGTACCAATCTGAATTTTCTATTTGGCTGACCTCTAAAGAATGACAGAGGAGACCAATGCAGACATCAAGTGTTCAGCAAAGCAACCTTTCGGGACAATAGTTGCTCCCGTCCCGGATGCCAGTGTGACCAATTCAGCAATTCTGTCTTTCCCAGGGATAAAATGAATATTGTGTCAGTGAAGCTAGAATCATAGAGTGATGATCTGAGAATCAGTGAGAAGAAAGACACTGACCTTGGAGAGGTTTAAGAATGCCTTACAAATAGCTATCCAGAACATAATTAAAGGCATTTTAACATCATAAGCCTTGAAGAATGCAAACCATCACTACTGCACACTG-GGGAGTAAAAGATACTGCTTTTATAGCTGCAGAGCTTATGGTCAGAAGTGATATGAAATATTAGAAATGTGACAGTTTTATAATAATTTTATTCTTGCTCATTGTGATAATTTTCATTTGCAGCTTTTTACCTTTGAATATCTTGAATTGCATTAAGCCTTTCTCACTCCATCTTTGTCCTGTAACATTAGGG----GCCGTGGTTTTAATCTAAGGA-ATTACAGTAAATGCTACAGGC--ACAAGGAAACAGATAATGGTGTTTATGATGCTCTTGTTATTTGAAGAATTAAAAG chr4 - 94230402 17269091 17269090 17270088 76960315 76960314 76961312 998 CAGAGCTAGTGGA--CAGTGCT-ATAATATACAATTTATCCTATTTGATACTTGTTAACAAGGGCAGTGATCCATGAAGAAGATTCTTCTTTGAATTTTTGTGTCTGAG--TTAAAATTAATAGTTTGGGAGTGGAGTCTATTACTGTGTGCTATATAGCTAGCAATCGTTTAAATTCAACACAAATTACACATGGACTGGG-------GATCTCAAGGTGCCTAGTTATAGTTATGATTGGCAACCAATCATTTATTTCTCATTTTC-ATTACAATATGTCATCAGAAACATAAGTTTGTAAGATGCTCCTTCTGTTTACCATATGTTTGATATTCATGAAC-CCAAGTGCAGCAAAAATAAAAGAGTAGCTTAGCAATATTACTATCTTTTTCAAATATGAAGTACATACGTTAGTTCTCTACCCATCTGACTTTTAAGGATTAATAGAAGAGA--AAT--AGACATCAA-CAAGCAGCATTTGAACCTTTGGGGACA---GTTGATGTAATCCT--ATGCCAGTGTAGCCTCCACAGCAGTATAGTGATTCCCAAGAATAATAGAGATATTATGTCAGTGAAACAGAAATCATAGAATGATGATCTGAGGATCAGCAAGAAGTAAGGTTTTGACCTTGAAGAGATTTAAGAATGCCTTCTGAACAGCTATCTGGGACATAATTAAAGGCATTTTAACATGATAAACCCTGAAGAACGCAAACCATCATCTGTGCACATTGAAGAAGTAAAAGATACTGCTTTTATAGCTGTAGAGCTTATGGTCAGAAGTGATATGAAATATTGGAAATGTGACAGTTTTATAATAATTTTA----TACTCATTGTAATAATTTTAATTTGCAGTTTTTTGCCAGTGAATCTCTGGACTGGCATTAAATATTTCTCAATCCAAC-TTGCCCTGTAATATTAGAGTGTCTCTGTGGTCCTTTTTTTCGCATAACTCTGTAGAAGTTGCAAGCAAACAGGCATTCAGATATTG--------------CCTGTTATTTAAGCTAACAAAAG ....:..x.xx..--.......-x.:.x......:......:....xx......:........x...:...........xx.......:....::....x...:.x...--..x....x...:.....:....::.............:...x::.....:......:...........:x.:...x..::x..:..x.x:x-------.x.:............x:..xx::.:...........:x.x..:.xx....:::..::.-.......x:...x::........:..:.:.x....:x:...-.x.:.:.......x..:......:...x.:x.-....:..xxx.x....x:x::x:.:x.:..-...::.:.xxx.::...xxxxx....x......xx.:x.x.:..:....::::x.....:.:...:..x.:.:...:....--...--.........-::xx.....xxxx.......x......---....x.x:x:...:--..........::..xx:x.....:.x:x..xx......:.:....x.x::.....:..........:.x::.........:............:.....::.....x...::x:........:....:..............x::..:.......::.:........................x....:..:.......:...........::xx......:..-:.:..........................:................................:............................----.:........:........x........:.....:..xx.....x...x..x.x.......::x.......x....x.-...:.......:.....:.----x.:.....::.xx.:.xx.x.-.x:x.x...:.x.:.:..:..--...:.x.xx......x..--------------.:........:.:xx.x:..... 13M2D7M1D86M2D91M7D59M1D41M1I32M1D30M1I81M2D3M2D9M1D27M3D14M2D224M1I91M4D78M1D19M4I21M1I21M2I18M14D23M 734/988 74.3% 998/94230402 0.0% 53/988 5.4% 5590737 NA +4996 chr4 + 190214555 22879089 22879088 22879327 239 ATTTTGGAAGTGCTACAAAAGACAATGATATTGTT--CTTGGTTT-AATAGGTGATCTGCCCCATGAAATAAAGCTGCAGGGCCACGTTTGTCTTGGTTAATAATGTCAGCGGAATGAGG-ATGTTTAGCTGTAATAACAGTAATAACTGTGTCAATGTAACTGCTGGGGCAGAATTTCCATCTGCAGCCTCATAATATATGACCTTTGTTATGCCTCTATCTGT------TGATTTTTTCAAGGCAAA chr4 - 94230402 17274332 17274331 17274568 76955835 76955834 76956071 237 ATTCTTGGAATGTGGTACAAGGCTGAGATACTGCTAACTTGATTTTAATAAATGCTCAGTTCTGCTCTATGAACCTTCTGGGCAACATTTGTTATGCTTAATAATGTCAA-GGAACAAGGTAATTTTAGCTGTAGTAACCATAATAA---TGTCTATGTTCCTTCAAGAATAGTCTTTTGACTTGAGGCT--------TGCAGTCCTCCTGCTGTCTATATCTGTCTGATCTGAACCTTTTGAGGCAAA ...:.x.:.:..:x::.x...:.x:x....:..:.--....:...-....::..x..x.::.:::xxx..:..x..x.x....x..:.....:x..x............:-....::...-.xx..........:....x:......---....x....xx..x.x:.:::..xx...:x.::..x:..:--------.:::::.:.:x.xx..:..x.......------...x::...::....... 35M2I8M1I64M1D9M1I26M3D40M8D27M6I18M 147/227 64.8% 237/94230402 0.0% 22/227 9.7% 5604757 NA +18450 chr4 + 190214555 22882967 22882966 22883462 496 CAACAATTAGTCAAATTAGCACCTCTATTGATTCTTGGAAGAATTT----CCTCCCATTTAACCTACTCAGAT--CAATTAGCTTGGCATCTGCCTCCAACTTCATATATCAATATAACTGTTTTCTCCCCAG-CTAACTGCTACTTAGGAGACAAT-GGAGAGGTGGACCATTTTACAGGACAATAACATGGTTCCTGGAGAAATAACTCGGGAGACTGAAGAAATCAGATTTATTTCCAAAGAAAATGGTACATCCCTCCCATGGTGCTTAATACACCAGTGGTTAAACAATTAAGTTTATTTTTGGGTACAAAGTTAATTACTTTGAAAAGGCAGTGATGCTGCCATTGACAAATACTACCCTTAAAACCCTCAGAAATAACAAGGCAGTCACCCAGAACAGCTAAAATGGCAACATTTGACATTTGGTATTGCAGGAATTACGGTCTTCCTGCAAAGTTACCTGATCTTTCTCATCTTAATTG-AACCTTATCAGGGCAGG chr4 - 94230402 17276730 17276729 17277207 76953196 76953195 76953673 478 CAGTGGTTAGCTGAAGTAGTACCTTTATTGATTCTTCAAACTATTTAATTCTTTCTTTCTAGCTTACTCAGATATCTATTTAGTTGGCATCTGTCTT-AACTTCATATATCATTGTAACTGTTTTCTTCCCAGACTGACTGCTACTTAAGGGATAATAGGAGGGATGCTCTGTTTTACTAGACAATAATATGGTTCCTGCTTGAATCAATTACAAGGCTGAAGGGAACCTGATTATTGCCAGAGAAAATGGGGCATCCCTCCTATTGAGCTTAATATACTAGAAGTGAACCAATAAAGTTGATTTTTGGATACAAAGTTAATTACATTGAAAAATCAGCTGTAATCCAGCTGATGAATGCTGCTTTT-AAACACCCAGAAGTA------TACTCATTTAGACC-----------TATTATTTCCTAT------TTGTAGGAATTAGGGTCT--CTATAAAGTTAGCTGATCGATTTCATTTTAATTGTTCCCTTATTATGGAAAG ..::::....:::..x...:....:...........x:..xx....----.:.:.:x.:..:.:.........--.x...x:x..........:..:-..............x.:............:.....-..:...........:.:..:...-....:.:..xx.::......x:........:..........xxx:...x.x.::x:..:......::.x.xx:x.....x...:.........x:.........:..x.x........:..:..x:..x..x....x.....x........:...............x.......:x...:x:.:x.x.x::...::...:..:.::..-....x.:.....:..------:.x...:::...x.-----------:.x:....xx:..------...:........x.....--..::.......x......xx.:....:.......-xx......:.x..x.:. 46M4I23M2I22M1D35M1I23M1I209M1D15M6D14M11D13M6D18M2D34M1I17M 344/469 73.3% 478/94230402 0.0% 36/469 7.7% 5606237 NA +3111 chr4 + 190214555 22898021 22898020 22898065 45 TCTTTTTTGTTGTTGTTTGTTTATTTTATTTTATTTTTTTGAGAT chr4 - 94230402 15718733 15718732 15718777 78511626 78511625 78511670 45 TTTTTTTTGTTGTTGTTTGTTTGTTTTAATTTATTCACCTGAGAT .:....................:.....x......:x::...... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 7179288 NA +22429 chr4 + 190214555 22904539 22904538 22905004 466 TCCTTATTTTATATCCCTTACTTGACTTTTTTTCATCTACACTATTGCTTTATCAAACTCTCTTTATTTTTATTATAATTCT-AGAATAATTAGAAATAGTAGTAATTAAATT-TCTGAAATCTGCCTGTGTAAAGTCAAGTAAGAGCATTTCAATTCTATCAGTGTGGGTGTTAATTATTTTAGGCAAGCTGTCATTTAGGCTTTCTAAAGTGGGTTTTGTTCTTGCAGTCAAGAACATTGCTTAGTGCAGAATTAATTAATCATTATAAATATAAAACGTGCAGTATCAGCTCCTATGTTCAGAAAGGTTTCAAGAGGCAAGGTTGAAAGAGTCAACAGGCTGCTAAAGGGAATCTTATCATACGCCCTCACCCTCAATCTGATAAAAGGACAATTAAACTATGTACTCCATCTTTTCGTAGGCCCTTACTTCAAGTATTGGTTCAAA-----AATTGGAAGCGAATACTT chr4 - 94230402 17278891 17278890 17279346 76951057 76951056 76951512 456 TCCGCATTATATTTCTGTAACATATTTTATATGAGTTTTCAATCCTGCTACATCAAATGCT-----TCTTTAATGCAATTCTTCTGCTAGTCGGAAATATTAGTAATTAAATTCTCTGAAATACGCTAGTGTAAAGCAGAGGGAGAACATCCCAATTCTATCAGCACTGGTGTTAATTATTTTAGGCAAGCTGTCATTTATGTTTTCTAAAGTGGATTTTGTTCTTGCAGTCAAGAACATTGCTTAGTGCAGAATTAATTAATCATTATAAATATAAAACCTGCAGTATCAGCTTCTGCGTTCAGTAAGGTTTCAAGAGGCAAGGTTGAAGGAGTCAATAGGCTGCTGTGGGGAATCGTGGTTT-----------CTTCATCTGATACAAGGACAATTAAATAATACACTTAATCTTTACA-GGGCTATGTATTTAAGTATGATTGCaaaataataataataaaagaatattt ...x:...x...x..:x.x..x.:x:..x.x.xx:.:.x..x.x:....x:......:x..-----.:....x.::......-xx:x..:.::......x.............-........x:..:x........:x:..x:...:...::............:::x................................x.:............:................................................................x.............:..::......x........................:.......:........:x:.......x.:x:x.-----------..:x........x.............:x..::...:x......x.:-:...:x.xxx..:......x:x.x....-----...x:x..:x.....:.. 61M5D16M1I30M1I250M11D46M1D28M5I18M 350/449 78.0% 456/94230402 0.0% 24/449 5.3% 5625648 NA +7286 chr4 + 190214555 22907312 22907311 22907480 169 GAAAAGTGTGATACCATCTGTGCCATACAGAGCA---TGAACTATGCAAGCACCCACCATTTTTTAGTTTATTTAAAAATATATCATTTTAAGATTAGCAGCACTATAGTTATGTATCTAATTAGATTTTATTTGATTTGGCATCCAATTTTTAAAAACCTATCTTTTAAAA chr4 - 94230402 17280187 17280186 17280354 76950049 76950048 76950216 168 GAAAGGTATGG----GTCTGTGCAATACATAGTAGTATTAATTATGTAAGCTTCCTCAGTTTTATAGTTTATTGTAAAAGATACCATTTTATGATTTGTATCACTACAATTATGTTTCTAATGGGATTTTAATTGATTTTGAATCCAATTAAAAAAAATCCCTATTTTTAAA ....:..:..:----:.......x.....x..:.---.x..:....:....x:..x.x:....x.........xx....x...:.......x....x.:.x.....:.:......x......x:.......x.......x.x........xxx.....:.:x.x....x... 11M4D19M3I135M 125/165 75.8% 168/94230402 0.0% 7/165 4.2% 5627125 NA +4596 chr4 + 190214555 22921833 22921832 22922221 389 GGTAGCTTAAGCATTTAGACACCTGATGGCAATCTTTCATTAAATTTGGTGTAGTAGCA----------GCCTCTCTGGCAGGTAGGAGAG---------------AACACAATTTGTTTTTCTTCAGCAATCTTCAT-------------------------------------ACCAAATATCTGAAAATGTTTCCCAGTGACAGACAGAACTGAGAGCTTAATGTCTTTCTAGATGAGCGTGGTGGCTTTCATCGGGGGAAAATGCTGTGGGTAGA---TGAGCTCAATGAAAAGCAAAGAAAAGAGGAAGGAAAATGAAGTTTATGCATGGTCCAGATACATTTAGGGACTCAGGCAGACTGCT-TAGAGAGAGA------GCAGGATGTGATGCTAATGGGCAGGAAACGAGTTCAGTGAGATTTATGTTGTGTTAAA--ATGCAGTATCATCTGGTG chr4 - 94230402 17282822 17282821 17283258 76947145 76947144 76947581 437 GGCAAGTGAGACATTTAGACACCTGATGGCAATCTTTCATTAAATTTGATTTCATTAAATATGATTTGTGCTTCTTT---CTGTAGGAGAATGACTTAAGCATAATAATACAATTTAGTTTTGTATAGTGTTTTTTGTTTTTGTTTTTCAAaaaaaacaaaaaacaaaaaacaaaaCGAAACCCTAGAAATTGTCTTAGGATGAGAAGCAGAATGGACAGATAATCCTTCTTGGAAGTGGATGAAACAG----TACCAAGAGAGGCAGC-ATAGGAAAAGATTGAGTTGAGTTAGAGGTGAAAAATGCAGGAATTTTAAAGA----------------AGAGGCACTTAAGCATTTTTGCAGCCAGTTATAATGAGACAAATCTGGAAGAAAGTGGCAATAGGAGGGAGGAAA--AGGTGAATGAGGTTTATGTTGTGTTAAATGATGCAACATAACCTAATG ..:.:x.x.::.....................................:.x.x:.x:x.----------..:...:.---xx........:---------------..:.......:x....x.x:..::x.:..::.-------------------------------------..x...:x::x....x...:.:xx::...x.::.....:x..x..x.x.x:x.::..xx.::..:::.x::::.----:.:.::.:..::xx..-:.:..x.:.---....:.x.:.x.:.:.::..:..x:x.....xxxx..x..----------------...x:..:...:.x.:.:xx....x.x.:.-..:x....x.------.x..:.x...:::x..:x:..x......--..x.x.:....:................--.....::..x.:..::.. 59M10I8M3D11M15I32M37I74M4D16M1D9M3I40M16D30M1I10M6I28M2D28M2I18M 229/363 63.1% 437/94230402 0.0% 100/363 27.5% 5639011 NA +4509 chr4 + 190214555 22929637 22929636 22929732 96 CTCTCAGCAACTCTATGATGTAAGTA-CTATTATTATCCCCGTATGACAGATGAGGAAACTGAGGCACAGAGAGGTTAAGAAATTTGCTAAAAATCT chr4 - 94230402 10729167 10729166 10729263 83501140 83501139 83501236 97 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ...x..::.x.:..:...x...:...-:..:...:.x.:..:.x.x....:..:.:.............x.x........x.......:x.:.:... 26M1I70M 70/96 72.9% 97/94230402 0.0% 1/96 1.0% 12200470 NA +3079 chr4 + 190214555 22937328 22937327 22937377 50 CCTTTATTTTTCTTTCTTTCCTCTTTTTTTTTTTTTTTTTTGAGGAAAGG chr4 - 94230402 77850753 77850752 77850802 16379601 16379600 16379650 50 CCCTTATTTCTCCTTCTTTCCTATTTTGTTTTTCATTTTTTGGGGACAAG ..:......:..:.........x....x.....:x.......:...x.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -54913425 -39316977 +3111 chr4 + 190214555 22938957 22938956 22939017 61 TTTTCTTTTTCCTCCTCCTCCCTTTTCTCCTCCTCTTCTTCCTCCTTTTTCTCACCTGGTC chr4 - 94230402 53066147 53066146 53066207 41164196 41164195 41164256 61 TTTTCTTCTTCCCCCACTACCCTTCCCTCCTCCCCTTCACCCTTCCTCTCTTCACAAAGTC .......:....:..x.:x.....::.......:....x:...:.:.:.::....xx:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -30127190 -64103212 +3134 chr4 + 190214555 22956448 22956447 22956498 51 AAAGACCATTATGAGCTTTCTGGTGGAAAAAAAAAAAAAAAGAAAAGAAAA chr4 - 94230402 21223491 21223490 21223541 73006862 73006861 73006912 51 AAAGACCATTATATGTTCTTTTAAGGAAAAAAAAAAAAAACGAAAAAAAAA ............:x.:.:.:.x:x................x.....:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 1732957 NA +3134 chr4 + 190214555 22956448 22956447 22956498 51 AAAGACCATTATGAGCTTTCTGGTGGAAAAAAAAAAAAAAAGAAAAGAAAA chr4 - 94230402 21219517 21219516 21219567 73010836 73010835 73010886 51 AAAGACCATTATATGTTCTTTTAAGGAAAAAAAAAAAAAACGAAAAAAAAA ............:x.:.:.:.x:x................x.....:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 1736931 NA +8164 chr4 + 190214555 22959338 22959337 22959700 363 TTTTCTAATCTTTTTTATTGGAGGTGGTGGTGTCGTTG-AAAGAACTGTGGA-GTCAATAAACAAAGTTAACTAAGTGCAC----------AACTTTTACTTTCCCAGCT------CTGTGTGGGAGCCTGGAGGCAGTGTGTTTCTGAGATATGGCCTCCCCATAGGTTATGCCCAGGGATTTCCATTATCTTTAAGCAGCACACACTCC-AGAGCATCTTACTAATGATATTTAATTACATTGAAATTAATGATGTTTTTCACCGA-TCCTGGGCTGATTTTACAGCTTGGAGATAAGCTGGGGTGATTTTGGCTTCTCTGTCTCTCCATCTCAGCAGTCAAGTGCCCCC-TTTTATCTTTGCTGACTCTGCTTTTTTCCAG chr4 - 94230402 17288795 17288794 17289153 76941250 76941249 76941608 359 TCTTTTTCTTGTTTATACTGATTATGATAGTAAAGCTGCAAATAATTATGAAAGTCAGTGACCAAAGTTAGCAAAGTAGTCCTTAGAATGAAAACTTGATTTTATTAGCTTAAGAGCAGTGTGGGA--TTTGAGCCA------CGCTGAGATAACATCACACGGTAGGTCGCGCCTAAGGGCTGGCATTATCTCTCAGGAACACACACTCCTGGGGTGATTTATTAATTATGTTTAATTGCATGAAAATTAATGATCTTTTTCAGTGACTACTGGACT-ACTCTACAGCT---------GC-------ACTTTAGCTTATGTTTCTTGGTATTTGAGCAGTTAAATGCTTTCACTTTATCTTCATTGACTCTCTATTCTCCTAG .:..:.xx.:x...x..:..:xx:..:.:..:xx.:..-...x..:.:..:.-....:.:.x........:.x....:xx.----------..x:..x.:...x::....------.x........--:.x...x..------:x........xx::.x.x.x:.....:::...:.:..::.xx........:.x..x.:..........-:.:.::x:...:....x..:.......:...x:...........x.......x:..-.x....:..-.:.:.......---------..-------.:...:....x.x.x...:xx:..:.x......:..:...:::.-:........:::.......x:x..:.:.:.. 38M1I13M1I28M10I19M6I10M2D9M6D68M1I56M1I9M1D11M9D2M7D44M1I31M 229/338 67.8% 359/94230402 0.0% 46/338 13.6% 5670543 NA +26897 chr4 + 190214555 22969386 22969385 22969982 597 TATAAAAATTATATCAAAATGTAAAAGCTGAGGAATTAATCACATTCCTTAGAAGTTATTCTTCTACGTGACTCACTCAGTGGGTACGTGATGGAAGGAAC-TTTTATGGTGGGGGAATTCCTATCAGTCACAGCTTTTATAACTGCCTATTGATGATATACACTGCTCCATAATGGCAGTGCTAAAACTGGCTTTTACTTCCTTAAACCATCATTGTATTGAACCATGTAACCAGAAAATCACAATGTGGTGATCTCTCTCTACACTAATCCTCCCCTGAGCGCTTAATGACTTGTCTGTTCATCCTGGAGATAATAAACCTAAC-ATTGAAGCAATAGCTGTCTTGGTGACTTTGCATAAATCATTATTTGTAAAAGTGAAGGAAAACCTATAGATAGGAGCCAAAGACTGGGATTGCTCAACTTTCAGGAATTAGCTCTGATAATTGCTGTGGCTGCATTAGGAATGCACTGAACAAATACATGCA-AACCAAAAAGTAAATATTATTTCTCAAAATGATCAATATAATAACTTCCAAGACAGGAAGGGCAATTATGAAATATCTTAGCAAGATTTGTCT-----AAGCAAAATAACATTAT chr4 - 94230402 17293261 17293260 17293842 76936561 76936560 76937142 582 TATGAAAGTTAAATC------CAGAAGCT--------------ATTCCTCACAAATCGTTTTCATGTATTAGTGACCCCATTGCTACCTGATAGAAGGACCACTTCATGGAGAAACAGCTCTTCTTGGTGACAGTATTTATAGCTGCCAATCTATGACATATGGTATTCTATAATGACAGTGCTGAAATTGGCTTTTACTTCCTTAAACCGTCATTGTATTGAACCATGTAACCAGAAAATCACAATGTAGTGATCTTTCTGTATGCTAATCCATCTATGAGAGCTTAATGACTTGTCTGTTCATGTTGGAGATAATAAACCTCACAATGGAAGGAATAGCTGTCTCAGTGACTTTGCATAAATCATTATTTGTAAAAGTGAAGGAAAACCTATACACAGAAGCGAAGCAATAAGATTGCTCACCTTTTTGATATTAACTCTGATAATTGGCTTTAAAGCATCTGTAATGTAGGGAATAAATAGATACAGAACAAAAAAATAAATATTATCCCAAGGTGTAATCAATAAGAT---CTCCTACATAGTCAGTAAAATCATTGAATATCTCAGAATGATTGACCTTTCCAAAGCAAAGCCATGCTAT ...:...:...x...------:.:.....--------------......:.x..:.::..:.:x.:::.x.x.x..:.x:.x.x...x....:......x.-:..:....x.:::x.::..:.x.::..x....:x......:.....x..:x....:...::x.::..:......:.......:...:.....................:......................................:.......:...x..::.......x:.:x....x......................x:................x..-..x....x...........::...............................................x.:..:...x..:x.x.::.........x....:x.:x....:............x:x.x:xx....:x.x....:.xx...:.....x..:..-...x.....:..........::.xx::x:.:.......x:..---:...x.x.:..xx..x:x...:..x:.......:..x.x....x::..-----.......::x.:::... 15M6D8M14D58M1I224M1I162M1I42M3D48M5I17M 431/574 75.1% 582/94230402 0.0% 31/574 5.4% 5676125 NA +16101 chr4 + 190214555 23001344 23001343 23001919 576 ATTTAGAAAACCTGA-CTGTAGTCAACTCTTTTCTCAGAGTTTTGATTGTTAAATTCA-TTTCTGTTGTCAGAAAAAGAGAGAGCGAGCGAGAGAAAGAATAGCTACATGTGATTATCTG--AAGCTGAAAGCCAAGCACAAGTTAGATAGCAGCCATGAACGCAATGCCCAGTTTTGAAGAGGAGCTTAAAACATAAG-TCAGTGTCTGGACACATTTGTTAAATTATCCTCAGCATTTCCATGTAGATCCTATTATTTCTACAAATTCCTTCATAATATTGCACTTTTTGTCATGATGAACACAACCTCTCTTATCTCAGAAGTGGGGTTTTCCAGCTGTTGGACTGAGGAAGCTCTATTCTTATGAGTTTCATATGGAAGCAG-CGATAAGAAAGACAACACTGTGGTATTTTAA--CTAGCTGCTCTGATGAAAAGCTTCCATTGTCAGGTGGTGTAACACCAATTGTTAATTTTAATCAAAGGGAATCTAATAGCTTAATGAAATCATTGACAT------------TAGATGTTCCTGGCCCTCCAGCAAATTGCTGACCATATTATGGAAG--TTTATTTTTCACATATTAA chr4 - 94230402 17299283 17299282 17299857 76930546 76930545 76931120 575 ACTCAGGAAACTTCAGCTCGAAGCAATTATTTTT--GGTGTTTTGATCACTGAATTTAATTTTTTTTTTCCTAAT----------------GATAAAGAATATCCACATATGACTATTCAGAAATCTGAAAGA-AACCATAAGTTA--CAGGAAGTCTGAATTAGGTCCACGTTTTCCAAGATGAGCTTAAAACATAAGATTAATGATTGTACAAACTTGTTAAATTGTCCTTTGCATTTCTTTATGGATCCCATTATTCCTTGAAAAAATTTAAGGACATTTTAGTTTTTGTCGGAACTAACGCAACCTCTCTTATCTATGAGGCTGTGGTTCCCAGCTGTTGGATAGAGGACATGCTTTTCTTATTACTCTCATCTGGTACTAAATGATAAGAGGGACAACAACACTCCATTTTAAAACTAGCTATTGCAATGAAAATCTCCTATTGTTACACGGGGCAATGTTAGTGGTTAATATTAATCTTTATGAATCTAATAACCTAATGAAATCATTTGCATCATGGCTTATTCCATATACTGTTG--CTTGCATTACGTTGCCAGTAATGTGAAGAAAGGACTTATTTTTCACAATTTAA .:.:..:....:.x.-..xx.:x...:.x....:--:.x........:::.:....:.-...:.x..x..xx..x----------------..x........x.:....:...:...:::--..x.......x-..x..:......--:..x.:x:x....:xx::.x.x.:x...:x....x................-.:.:..x:..x...x.:..........:....:x.......:x.:.:.....:......:..xx...xxx:..x.x:.:...x:.x........:x:.:x...:...............xx..:.:x.x.x..:............:x.....x::x..x.......x.x.:....x...x.x:.:-:.......::.......x:::xx:.......--......::.x::.......x..:.:.....:.x::..x.:..::::.:.x......x......xxx:x..........:.:.............x:...------------:.x..::.x:..--.:.x..x:.x:....::::x..:.x.x.:...--:............xx.... 15M1I18M2D22M1I16M16D29M2I11M1D12M2D51M1I186M1I31M2I99M12I12M2D32M2I19M 376/553 68.0% 575/94230402 0.0% 45/553 8.1% 5702061 NA +69425 chr4 + 190214555 23013249 23013248 23016138 2890 TGCTGTATGTCTGTTGATGTTGATAGATAATTTGCAAATTGTGTTGTCAACACAACATTTAATCTGCTCTGAGCAGCTCATAAACAACAGTTTGATTAATTCTTTCAGTCCATGTCTTCTGGACAAGATTTACAGGGCTCTGCTTATTTGGATGAAAAATAGAGAAAGACAAGCTGTCAGTAGAAGGGGAGGGGAAAATGGGAAGATTTCCTTTTCTCTTTTTTTGGTTGAAGTTTAGAAGTGTTTTGAAATCATGATTCTTTAAATGTTTGGTTTTTGAAAG----GAAGGATTTCAAAGTGAAACT-------CAGCAATTGGCATGAGACAAGACTCAGTG---TCAAGGTGGCAAAAGTTAGGACAGACAGAGGCAGATTG------GCTGTGGATTATTGTAGGGAGGGAAGAGTAAGTCAAGCCTAAGGCAGGAGATGACTTTCTGAAT-----TACCCAATTAATTC-CAGAAACCTGTTGGATGATTATAACTCAGAGAGCTTGCCATCCATGCTCTGTATGGAATACTAAAGTATTGT--GATGAATAG-----AATTTTGTTCAACAAGCACATTTTGGAAAAAATAGAATTAAAAAGAGGCTATCAATCAGTGACA-TGAATATAGAGGTAAATGTTGTATTATTAGTAGTACTGAACAGTAATGAGAGACA------GAGAGAAAGAGACTGAGTCCGTTGTCTTTTTCTTGTATTATTACGTGCCAGTTTTGTTCCTAAGGCCCCAAATCTGTTT---AGTTGAGTGGTTTCTATTAATTTTGGCTTTGAAATAACTTTCCATTGAAGCATGGCTTTTAATCAGCACCTCTCTACCTGTGTTGATTTATCCTAGCCAAGATAAGTGAATAGAGTTCTAAATCGCTGTTTATG-AATACCGTTGTATCACTTTGAAACATGAGGATCATCCAGGAGCTTAGGTGCAAAAACCTGGAAATGAATGTCAATTGGAATAAGGT------CCTTTCATAGCAATTATGACACAAGATGTACAGACAGTCTATGGCTGATAGGGAAAAAAGATCCAAGAAAATAGCTATATAATAATTTCAGGACTATGAGAAATGTAAATAA---CCCAACACCACAATTCCTCCTTGTAT-TTGTCCCCTTTTAT--GTCTGTCTCCTCTCAAAGGGATAAATATGATTTTTATAAGCTGTATTTTGGAATGCACACATTTGCAGTGATCATGCCAAGTGT----------TTCTTTTGTTGTTCACATCTGCATCTTTCGA--------------TATGATGAAGAGTCAACAAGAAAGTAGATTTGGTTTTGTTCCTTTGACAAATAAAGTTCACTTTGGGACACCATTGGAGAC----AAGGGAGAGAAAACAACATTGCATCCATACCAGAAAAACCAAAGCTGAATTTTCTATTAGTGGCGGTTATAAGTTGTAACTTATATGTGATGGTCTTTGGAAATATTAACCCAGATTCAGAAATGAGTAATTATATTGACCTTGACATCTGTCCTCATTACCTTGTTCCCAGCTCACACAATTAGTTTAGCTGAGAATGTCATCAAAACCCTGCGTTTTAGATCTATTTCTAGCAAGAAACTCCTTCAAATCATTGCCCCATGAAAATTACAATATTAAGGACACAAAGGTATACGTGTATCTAATTGCAGTAATTGTGATGAGAAAGAATTCACATAAATCTCCTTTAGGGGCTTCATTCTGTTTGATGGACTTCATGTACTCTCTTAAAACTGAAATGATTTCAAAGCATTGTTCCACAAAAGATTATCAGCAATTATTGTA--TGTGAAAAGAGAAAGGGCAAGAGAGAACACTTTGA--GAGGTTCACATTGTGAAATAAACTTCAGGCTTTTAACTTGA-GGATGGCAGAGGCTGACTAAAC--CCTTGTAATTCTGGAACTCCCTGTTTACTGTGCTCACTCCCACTCCCACCCCTCAGACCACAATTTGTTGGGAGCATTGTTGTTGTACAAGCAATATGCTGACAG--AGTTTAAATGTTAACACTACCCTCCTGAAAAATGAGCGAACCACGTACTCATACAAAGAAGAAAATACCTAGTAATTTTCAATCTCCTAAAAATAGTAATAATAGTCTATTGGGTTTATTTCATGATTATAAAAGCCTAATAATCTATGATAGCTGAAAGCAAGCGTGATTTATTAGGGT-CTCTCACAGACAGAAGATAAACCCATAATGTGCAGGGAAACATTTTTTTAAAGGATTGTGCTAAAAAGAAAATAGACAACAGCTTGCTTACTCTGTAGCTCCAGAAAGTGATGATTTGAGGCTCCGAAATATCAGAGTTGATGAATGGGAGAAGCAAAATTATAACTGTTGTTCCATGGTGAGATAAACTTTCACCTCCGTGAAGAAAATATAGATTACTGAAACGGATTGCAAGCAATCAGCACTGTAGATTCTTCTTCCCTAACTGAGCAATGTTTGAATTTGCGCCTTTCAGACAAATGCATTAATAACATTTAGCCACTAGGTATTTGTGGAAGAAATTGGAAATTGTTTTTAATTTGTTGGTTTGGTGAAGCGATAATATATTGAGCCATAAGGGAGGGGGTTAAAAAAAAAAAAACTACTGGTATTTGATTTCTATTTGCATATGTAAATATATTAATGCAAACAAAGCCATGT-TGTTCCTATA--------AACTCTCTCACACAAAGAAAAGGGTTAATAG-----ACAGGCAGATTTTTTTTAAAAAAATGCATGACCATGTTGTGAAATAT-------GAATTTAACACATAACTCATTGGAAGTTCCAATGAGTTATGGGCCTCATTTACTGCATATTACAGACATTTTTTTCATACTCCTTTTCAGCAAGGCATATGGTTTAAATTAGTTTCATCTTGGATT-TTCTAGGGTCTTTTGTAGACTATTTC--CTGCAACAAACTGTA------ATACT-----CTTGCTCTTTTAATTCTATAG--TAAGAT chr4 - 94230402 17300856 17300855 17303616 76926787 76926786 76929547 2761 TGCTATACTTCTGTTGATGTTGATAGATAATTTGTAAATTGCGTTGTCAACACAACAGTTAATCTGCTCCAGACAGCTCATAAACAGTTCCATGATTAATTCTTCCAGTCTGTGTCTTCTGGACAGGATTTACAGCGTTCTACTTGTTTGGATGAAAAATAGAGAGAGACAAGCTGTCACCACTGAGAAA------------AAGAGTATTTTTTTCCTTTGCTTTGT---AGCTTAAGAGTCATTTTA--TCATGACT----------TTACTGTATGAAAATGGCAGAAGATTTAAATTTGTGACTGATGATGCAGAAGCTG--------TAAAACTTGATGGACTCAAG------AGTGTTCATAC---------CATATTACCACAAGCTACACAT-ATTTTAGGCTGGGAACATCCAGTT---CACAATGCAATAGC--AATTTAGAAGTGTTAGTCCATGATCAATGCATAGGATGATGTTAGCCAATGACATTTGAAAGAGCTGTTTATTTATAGCCTCGGCTGAATATTGCAACACAGCTGGAGGAAAAATGAGTAATTT-------CAAAGACAATTCAGGAGATATGTTGTGGGTGAGGGGCTG------GGGGACACTGAATTTA----------CTGTGTCCAGA----TACTGAATAGCATTAAAACAAAAAATCTGAAGGAGTAAGGCTTGCTTTGCTGACCTTGTCTTTGGTTATCATAT----------------------TAAATTTAACTTACAGCTCGGAGGATCGTGTTA-CTTTGGCACTGGAATA-TTTTTCATTTATATGTACCTTTGAATCAGCACACTACTAC---TGTTCATTCAGTTCAGCCAAGACA--TAAGCATAATTCTGGATCACTTTTGACATAAGGTACTTATATCACCCCCAAGCACAATTACCAACCGATAACTAGAGTTTGAAAATTAGAAACTCAATGCCA-CTAAAGTAAAATTCAATTCCTATCAGAATGATTGTGATAAAACATATACAAGCAGTTTGTGGCTGATATGGGAA---GATTAAAGCAAATAGCTATCTATTAATTTCAGGAGTATCAGAAATGTAAATAAGAACCTTCCACACCAGTTCCTTTTTGAATGCTAGCTGATTTCAGCAATCCAGCTCTCTT-----GGATGAAATACATTTTTGAAATCTGCATTTCCAAGTTTGCATATCTACAGCTTTACCGCCAATTTTATTCTACTTTTTCCTTTCTCTTTATTTTCTCCACTTTCTAAACCTTCTGGAAAATTaaaaaaaaaaaaaaaaaaaaaaaaaaa---------GTACTTT----AAAAAAATTTTATTATGGTACATGTATGGATGTTCGTAATGTAAAGTAAGAAAGTCTGCCCCTAAGAAAGGATAGCAGTAG--------------ACTGGTGCTTGTA---TATAGTCTGCATACAACA-CCCAGGGTAATGCTAATCTAAATATAGAAA---GTAATTACACTGACCTTGATACCTCTCATAATTATCTTGCTTATAGTGCAAAT-----GTTTTGCTGAAGATGTCATCAAACCCATA-GTTTTAGATCTATTTCCACTAAGAAACTCCCTCTAATCATTGCTCTACAAATATTGTGGTTTAAACGATACCAAAGAATCAGTGTATTTAATAGCCATAATTGTTCCAAGAGAGAATTAAGATGAACCTCCCTCACAGACTTAATTCCA----ATGGCTTTCATGTACT-TCTTGCAGTGTCAAAGCATTTAAAACACTGTTTTATAGAAGATTATC--------TTGTACCTGGGGAAAAAGAAAGAACA-GAAAGAACAATTTTATGGAGTTAAAAAACCTGAAGTGCACTTCATTCTTTCACAGAAACAGATGTCAGAAATTGACAAAACGCCCTAATATTTTC------------------------------------------------CAACTTGTAAGAAACATTTCTGATATACAAGGTACATACCAACAGCAAGGCTAAACAC-AACACTAGCC-CCTGAGAAACAAGGGGCTCATTCATCCACACAAAGAGAATAATACACAGTGATTTTCAATCTTCTGAGAACAGCAGTG---GACTATTGGGCTTATTCCATGATTATAAAAGCCTCATAATCTATGACTGCTGCAAGCAGAAATGATTTATTGGAGTACTCTCATATATATGAGATAAACCTATAACTTGCTGGCAGCTATTTTTTTAAAGGAGAGTATTAAAGGAAAGGCG---AGCAGCTTGCTTACTTTGTAGCCTCAGAAAGCAATGATTTGCATCTCCAAAATATCAGTTCTGATGAATGGTTGTAGTGAAATTATAACTGCTGTTATACAAAGAGATAAACTTTCACCTCCATGAGGAAAATATAGATTACAAAAACTGATTGTAAACAATCGATGCTTTATATTCCTTTTTCCTAACTGAGCAATTTTTGAATTTATGCCAGTCCAACAAAAGCATTAATAATGCTTAGCCAGTAGGTATTTGTGAAAGAAATTGGAAATTGTTTTTAATTTGTTAGTCTGGTGAGGTGATAACATGCTGATTCAAGAAGGAGG-------------AAGAATTGATATTACGTGTTTGCTATTTGCATACATAAATATAGAAACACACATATAAGTGTATGTCCTCCTACACATATACTCACTCTTCTGCACAAAAGAAGATAAGTATAGTGAATACAGG------------AAGGAAAATCATAATCAGTTTCTGAAAGATAAGAAAGGAAAGTAACTCA-AAAGCAGAGGAGTCTCCAATGAGTTATGAAACTTATTTCCTACATATCACAGACATTTTCAACAT--TCCTTTTATATGTGTTATATAGTTTAAATTAGTCTTATTTTATCTTCTTATTGAGTCTTCT-TCTGTTATCTCATCTGTAAAAGACAGTGCAAAGCATACTGCCTATTTGCTCTATATAATCTATGGGATAAGAT ....:..:x.........................:......:...............x...........::::.............::xx:x............:.....::.............:.........x.:...:...:...................:.............x:.xx::.::.------------....x.x::....::....x:..x..---..:...::...xx...x.--......:.----------..:x.x.x.....:----::.:.....x..xx..x:...-------...x.::..--------:..:...:::..---.....------.:x...x:x..---------..x...:------...:::x..-...x....xx.....x.x:x...:---.x:..x...:x..x--.x...xx:.:.-----.x.x::..:...x.-:..:.xxx....:.x::..x.:.x:.x.:......xx::..::..:x:..xx::x.....:.:x.::.:x.:--..x...x.:-----.....-------...:x...x..::.:.:.x..:xx:.x::x:..:....:------:.x....-.....x..----------:...:.:xxx.----.......:..:.x.:.:.x.x.------..::..:x:..:..x:x.::.:..x.:..x....xx:....:.::.----------------------:....:.:x:.---..:.x:.x..x.:x.:...-:......x:..:....-:...:....x.x:::.:x....x.........x::x....---....x...:.x:::........:.--.:.::.x.:....::...:..x..x.::-..x::xx..:......:::x..:..::.xx.:..x..::x.:..x::..x::....::x.:..x.x....:..-:.::.:...::.------...x...x.:::...:...:.x..x..:....::....:.:.........x..:..---...:x...x..........x..x...........x...x..............---..:xx...xx..:.....::...x..-:.:x.:xx...:.x--:..::x...:::.-----....:..xxxx......:x..x...:....:x:.:.x::..:..:.:...:xx.xx:.....x.x.----------...:...x.:x..xx:x...x..::..:::.--------------..x:.x:..:.:xx..x..:...:x.:.---------..x.:..----...x...x..:.:.x...x...:xxx....x::----..x.x.:..x..:x..xx:...x:.:.x:xx..:.x.:.x:x..--------------.x...:.x..:..---.:..:::.::..:::.::-:.:xx..x...::...:.:.:..x:.....---.......:.:.........:.:..x..x.x....:....:.:x:..:x..x.:-----....x.....::...........x..x.:-................:.x:..........:..x.........:.:.::..x...::::.x.x..x..:..x..:.x..xx......:....x..x:.......xx::...:......x.x..:..:....:.:.x:.:...x....::----....x:..........-....:x.::xxx..x.xx..:...:..:....::.:.:.........--------.....--..x.:...:......::..-..:......x...x.--...x.xx.x.x:x....:.:x......xx....:.xxxx:.-:....x....:::....x....--...x:..x..::------------------------------------------------...:....x:.:.:....x:..x.:......xx.:..:.::....--..x:....:::-.......x..-.....:...::..x.:x:..:x:.::..:.......::.x.....x:...:...........:..:.:..:..:.:.:---.x........:.....:.................x...........:x....x.....::x:.........:.:..-......:.x.:.x:.........:....:x...x..x.:x:..............xx..::....:::..::::---.:.............:......::.......::........x:x....:.........xx:..........xx.x..::............:....x:.:::x...................:...:...............x:....x.....:..:.....::::..x..x....:.:..:..............x.........::...xx..x:.....x..........:::.......x............:.............................:..:......:.:.....:..::...x:..x:.:.....-------------..:..:.:x.:x..:x..x..x...........::........xx..::..x.:.x.:x::.:.-.x:.....:.--------x.....::::......::..::x:xxx....-----.....------------..::...xx...:.:..xx..x.....x..-------...xx....x..-..xx..xx...:x:..............::x..:....x..:.....:...........:xx...--.......xx:::x.x:....:............:.:..:..:xx..-..x.x.:.....:.-.xx::...:..--...:..x.:..x..:------.....-----:.......x.xx.x.....:.--...... 190M12D26M3D18M2D8M10D14M4I21M7I9M8D12M3I5M6D11M9D7M6I9M1D24M3D14M2D11M5I14M1I72M2I9M5I5M7D39M6D7M1I8M10D11M4D22M6I46M22D11M3I19M1D16M1D40M3D24M2D28M1I73M1D12M6I56M3D53M3I26M1I14M2I13M5D66M10I31M14I28M9D7M4D33M4I44M14D13M3D18M1D30M3D53M5D29M1D149M4D16M1D47M8D5M2I19M1D15M2I41M1I22M2I12M48D45M2I11M1D10M1D78M3D76M1I74M3D326M13D64M1I10M8I31M5I5M12D30M7I12M1D65M2D46M1I14M1D11M2I15M6I5M5I21M2I6M 1795/2630 68.3% 2761/94230402 0.0% 391/2630 14.9% 5712393 NA +9960 chr4 + 190214555 23028193 23028192 23028463 271 GTGAAAACAATACACAGAAGCTATGTAATTTTTCTATAGCAGTATTTTCAGTTGTACTTTAAATTAAGTATTTCAA----ATAAGGATTTAATTTAGGTTTAATGAGGGAGTTATTATATGTTAATTAAATATAAACTGATTATTATGAATATCTATTGGGGCATAACAACCTTTTTTATTAAGATGAATATCTCTTAAACAGTTGAAGCTTAGTAAATATGTTACAAATAATTAGCTTTAAACTAACATTCAATAGAAAGAATACATTTAAATG chr4 - 94230402 17306353 17306352 17306605 76923798 76923797 76924050 253 GTGAAAATAA---ACAAAAGTAAT------CTTCCAAAGAGAGATTTCTAGTTACACTTTAAATGAAATGCTCCCCCCTTAAAAGGATTTAAATCTGATTTAATGAGAAATTTATTGTATGTTAATTAAATACAAACTGATTACTATGAATATTTATTGAAGTGTAACAATAATTTGCATGAAGATAGATG----TTGAACAACTGAATTTCAGTAAATATGTTCCTAATAATTAT-------TTAACATTCACT--AAATTGTGCAACTAAATG .......:..---...:...:x..------:...:.x..x::x....::....::.........x..:.::.:.xx----.x..........x.:x.:.........::.x.....:...............:..........:.........:.....::.::......:xx...x:..x.....::..:----..:....::....x:.:............x.x........x-------:.........x.--...xx:.:..x:...... 10M3D11M6D46M4I111M4D41M7D12M2D18M 185/249 74.3% 253/94230402 0.0% 26/249 10.4% 5721840 NA +3203 chr4 + 190214555 23028244 23028243 23028329 86 TTGTACTTT-AAATTA---AGTATTTCAAATAAGGATTTAATTTAGGTTTAATGAGGGAGTTATTATATGTTAATTAAATATAAACTGAT chr4 - 94230402 83300081 83300080 83300170 10930233 10930232 10930322 90 TTATACTTTTAAATTATAAAGTGTGTCAAATGAGGATTTAATTTATAGTTAACAAGACAACGTTTGTAAATTAATTATTCATCATCTGAT ..:......-......---...:.x......:.............x:x....::..:x.::xx..:..x:.......xx:..x.x..... 9M1I6M3I71M 63/86 73.3% 90/94230402 0.0% 4/86 4.7% -60271837 -33958565 +8037 chr4 + 190214555 23030186 23030185 23030586 401 AACAATACATTATTATTTTGATGGGAGCTG----------GTTATATTAGTCTTA--ATATTAAAACTT----------AATCTTTATGCATGTCTTGAAAGGAGAAATAAAGATGATAATTATTGAATCTGTACATCGACTGTCTCAGAGGGGTT---TAATTACTTTCCATTCCATGAATACCAAAAGGAAAAACTTATAAAAAAAGTAGGCTATGTATTTTGAAGGAGGCTTAAATGTAGCAATTCTTCTACTCTATTTTTATA---TCATATTTCTTTCTAAGATATACTGATAGAATCTTTCAAAATTTAGCTCCTGTAGAAACAGAAGTTTTAATTGTTTGATTCAGCATTTTAGATA--------GTAAGATTTTCACTTAATTTTGCCCCTGATAATGATTTGCTAAAC-----CTGGTTCTTTAAAAAGACAG chr4 - 94230402 17311851 17311850 17312251 76918152 76918151 76918552 401 AAGAATTTGCTACTACCGTGGTGAAAGATGTCTCTCTACTGTTATCTCAGCTTTATGATATCATGCTTTGTGAGGGTTGAGACTTTGTGCATATATTAAAAG---AAACAAAGACAATAATTATTGAATCGGCACATCAAGAGCA--AGAGTGGTTCTTTAATCACTCTCTATTCCATGAATACTGAGTAGAATA--CTACAGTAAAA----------------------------AAAGTAGCGCTCATAATACTCTACTTTTATGGGGTCATATTTCTGTCTAAGATATATTAGTAGATTGTGCCAAGATTTAGGTTGTGCAGCTGCAGGAACTTGAAAAGTTGCCTCTAGTGTATCAGATACAAAACACGCAA------CATTAAATTTTGTGAACTATAGCAGTTAGCTAAGTGCATGATGTCTCTTTAAGAAAAGAG ..x...x:::..:..::x..:..::..x..----------.....x.:..::...--....:.x:x:..----------.:x....:.....:.x..:....---...:.....::..............x.:.....:.xx.:x--....x....---....:...:..:.............::.:x:...x.--:..:.:x....----------------------------..x.....:x.:x.xx.......:......:---..........x...........:.::....x.x.x:...:......x.:x..:..xx:...:.::..x..xx...xxx.::..::.x.:.....--------.:..------..:.x.......:xxx:x...::::..x.....::-----x..x:.......:..:.x.. 30M10I15M2I12M10I23M3D40M2D9M3I36M2D11M28D31M3I94M8I4M6D35M5I20M 246/360 68.3% 401/94230402 0.0% 82/360 22.8% 5718335 NA +3973 chr4 + 190214555 23050797 23050796 23050875 79 CTGCAACCTCCGTCTTGTGGGTTCAAGCGATTCTCCTGGCTCAGCCTTCCGAGTAGCTGGGACTACAGGCGTGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x...x..........:.x...x.xx...........:.:.........:......--....::.... 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 4853671 NA +16429 chr4 + 190214555 23052653 23052652 23053549 897 TTGGTGTGTTATGCTTGGCGAATGATATATTCTTTCCATCTTATCGTCTTCATACTTTGAAAACATTTCCAAGAAATA-CTTTTCTAGGTACCATGTGAAACTGACACATGACATAAGCATTATCAAATTTATTTGCCTTATTGCAAAGCGATTCTGTGTCACCACAGTGTAAGCCTTTCAGCAACTAGTGAAGTATCAAAGCTTTTACCATTAAGTGGTTAGTTTACTAACCATTAGATTTTACCATTAGGTGGCTACTTTATATGGAGTTATATAAAAATTTGTCAAATATTCCCT----GCTATTAATGAAATCTTAATGACAGAGCTCATACTTTGACATAATTTTTGGCAATGAAAAGTAAT--------TGCAGGTTGTTTG-GATAGATACTAATTGAGGTACTACTT--TTTTCTCTATGATTTAAGTATAATGTTTACAGTTTTTATGTGGTTCACTTATATATATTTGTCTACTAACATGCAGTGGG------CTTTGCAAACTTAAATTCATTTCAATTGAACCATGCTAAAAATATTTCTGAGGTTG-TATACTAACCCTCTGAAAGGATCAGGTGAGAATTTGAGGGGAG---------TAGAGAATTCATCTTGGTATATAGAATAGGTTGTGGGCAGTTGTATGATAACTTCTG-----CTAATAATATTGAGAATTGAACATCTAAATATTTA-----TAATCAGTACTAATA---------TGATGTTCAGACTTGCCTAGAGTATATTACTTAAGAGTTAGCAAGCAGGGTCCCTTATTTTCCAG-CACCTCAAGTTAGTCCATTATGGACAGGCTTTGGCATGTTACTGACTGTTTTTATTACATTTATCAGAACACTCATATCTATTAAGTGTAAAAAGCAAAGGTTAAATAACATTAAGATTATGACACAAATC----AACAAAAGAAATTT chr4 - 94230402 17318888 17318887 17319784 76910619 76910618 76911515 897 TTCATGTGTTCTACTTGATGAATG-TGT-TTTTCTCTATGTTATTATCTTTTTGTACTAAGAACATTTTCAGTAAAAATCTTGTTTGGGAACCACATGAAACTGACACAAAGCATATGCATCCCCAGATTTATTTGTCTTTTTGCAGAGTGTGTTTCTATTACCACA-TATAC-CCTTTTAAAAGCTGCTGAAGTATAAAAGCTTTTACCATTTGGTGAGTAGCT-------------ATTTTAC-ATTA-----CTACTTTAT--GGAGCCGCATCGTAATCTGTCAAGCACCCCTTTATAATTATTAGTGAATCCTAAATGACAGAGTTCATTCCTTGACACCTTGTATGACAGTGAAAAATAAGATTTTTCATGTAAATTGCTTGCAATATAGACTAATTGGCATACTAATTGACTTTTACTATAATTTAAGTTTATTGTTTATTGCTTTTAGATTGTTAGCTGACATTCATTTTTCTACTAGAACACAGTAGATATTGTTTTCGTAAAGACAAATGTGCTTTAATTGCACTGTAACAGTGAGATGTGTGGGTTTTCTGTTTGAATAACCTGTGTACCTCAGGTGTTTGTTTTTGGGTTGGTTTTTTTTCAGGGACTTTATCTC------CAGTAAAGTTCAAATTCAATTTTACCCTGGTTTGTGAGCAACAGAGTATGTTG-GCATTATATATGTAAAGAAATAAGGATAAAGCAGACCTCATACATTCTGCTTGAAGTCCAAGCTAACCT--GGTCTAACATTCAAGTACTAGGAA-------CCTTTACCATCCAATTATTTTAGGTCAATCAGCTGTA---------TGGT---TTATTGG-TCTTCAGATAATCCTTAACAGGCTATTTAAATCCGTTAAATCCACAAGT--AAGTTTAAGTAATATTAAGAACTTGTCATAGGCCCAGAAACAGAAAAAACTT ..x:......x.:....::.....-.:.-..:.:..:..x....::....:x.::x:.:.:.......:..:x...x.-...x.:.:..x....::.............x::....x....:x:..:.........:...x.....:..:.xx.:.x.:.:......-.:..x-.....:.:x.:..:x........x...............x:...:x...:.-------------.......-....-----.........--....::::..x:x...:......::.::..:.----::.....:....x:..x..........:....x.:......:xx.x.x..:..:......:...x--------..:.::...:...-:...x.x........:x:.....x..--:...:x....:........x..x......:x.:.....x:.x...x:..x.:..x:....x.......:x.::....:.:------:..:.:...xx:....x:::..:.....x..::.:x:.:x:.x..x.x..:.x..x-.:.x:x..:xx:...x:x:xx.......xxx:...xx...xx.---------:..:..x..:....:------:..x.x..x.::x:xx..:..x..:xx.:::..x..-----.x:.xx..:...-.x...:x.:..x....x.xx..-----x..x...xx..x...---------...x..:..::..x:...--:..x..x:.:.:...x::...x..-------..:...::x....:-:.::.:.:..:.:..x::.:.:---------...:---...:..:-.x..:xx..x.:x:...x...:x:.:.:.x...::....:.x:.x..:x--...x....:...:.......x:x..x..:.:::.----....:..:...:.. 24M1D3M1D49M1I88M1D5M1D51M13D7M1D4M5D9M2D32M4I65M8I13M1I26M2I80M6I56M1I43M9I15M6D36M5I12M1D22M5I15M9I18M2D24M7D14M1I22M9D4M3D7M1D49M2D34M4I14M 548/841 65.2% 897/94230402 0.0% 112/841 13.3% 5733765 NA +3396 chr4 + 190214555 23056337 23056336 23056436 100 TGGCATGATTTTGGCTCACCGCAACCTCTACCTCCCGGGTTCAAGCAATTCTCCTCCCTCAGCCTTCCAAGTAGCTGGGATTACAGCATCCACCACCACG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA-CGTGCACCACTGTG ......x..x..------.::..:..:xx.x..:.:.........::x...x.xxxx.........:...........:.:....-.:.x......:::. 12M6D67M1D14M 66/93 71.0% 93/94230402 0.0% 7/93 7.5% 4859223 NA +3527 chr4 + 190214555 23060548 23060547 23060653 106 TTTATACATATACACACACACACACACACACACACACA--------CACACACATACACACATATGTATCTATACACATATGTATATATATGTATCTATATGTATATACATATA chr4 - 94230402 4417344 4417343 4417454 89812949 89812948 89813059 111 TTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG---CCACAAACACTAACATATA ....x.......:.............x:x...:..:..--------::....::..:xx.x::..x..xx...........x...x......---.:.:.x::.:xx....... 38M8I46M3D19M 73/103 70.9% 111/94230402 0.0% 11/103 10.7% 18643204 NA +3034 chr4 + 190214555 23060552 23060551 23060696 145 TACATATACACACACACACACACACACACACACACACACACATACACACATATGTATCTATACACATATGTATATATATGTATCTATATG---TATATACATATATGTATATATATAATTCCTACATATTTATATATATAAAACAAGA chr4 - 94230402 4417346 4417345 4417493 89812910 89812909 89813057 148 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACAACACACAGAA ..x.:...:.:.............x:x...:..:..::x:x:.x::.....:.:.xxxx::.:x:.x..:..:.:....x..........---:.x.:..xx.:..:..x.:xx.xx.x.x..x...:::.:.:..:.xx.x...::. 90M3I55M 84/145 57.9% 148/94230402 0.0% 3/145 2.1% 18643206 NA +13134 chr4 + 190214555 23076957 23076956 23077393 437 TAGAACTTCTTCTAAAGTCTTCTGATAGATGTTGACGGATCCTATGCCATCAGCAGGTCAGTGTAATCCATTGTACC--AGAGTAGATGGATAGATG-ATGGGCTCTTCCTAGATAAAACTGTGGAAAGCAGAGAGGATTTACCCTGTAAAACTGCTGCATTTTGCTTGCTGCTACAAAAGTCTCTCTAGCTCTCCCTCTCTAAAATGTTTTCAGGTACTTAAGTTTATAATGCAGAAAGTGCTACCACCACTAAGGGTCTCTGTAGTTCGTCATAATTGTGGTTCTTAAATCAGTTTTTAAAGTTCTTTTTATTCAAAATAGAATATAGCATCTCCTCCCACCTGAAGGGCACAATTAAATAT--------------------------------------------------------CTCCTTTTTGGT------CTTGGAAGAAATTCAAGCAA-------GCATCATTTGGCAACATGCCTTAGGTCATTATAAACTTTACTAC chr4 - 94230402 17331611 17331610 17332112 76898291 76898290 76898792 502 TAGGCCTTCTTCAGAAAGATATGGGAAGATGTTGATGTATCTCATAAAGCTGACAGGTCATCGCTACCCATTGTCTCGCAGAATAGATTAATAGATTCATTGGTTCTTACTAGACAAAAATGTTCACAGCAGATAGAATTTATCCTGAAAAGTTGCTGCATTCTGCTTGCTGGTACAAAATGCTCTTCAGCTTTCCATCTTTCAATTGTTGGCAGGTACTCAAATAAGAAACACAGAGAACCAGTTTACAGTTATGGGTCTCTGTCCTCACTCATAATTATAGTTCTTAGATAGATTTTTAAAA-GCATTTTGTCCAGAATAGAACATTACATAGACCCC------AGGGGCACAATTAATCATTCTCCAGATATGTCAATGGTGTGATACAAGAGTTGGTAAATTTAATGCTTTTTTTACTTTTTTCTGGTGCGTTGCATGGAAATAAAAAAAAAAAAAAAAGGGAATTATTTGGCAATACAACTCAGATCATTACAAAATATTCTAC ...:x.......x:..:xx.x:x.:x.........:.x...::..:xx:::::.......x:.:x.:.......x:.--...:.....x:......x-..x..:....x.....:....x...xx.x......x..:.....:....x...::.........:.........x.......xx....::....:...x...:.x..x....xx........:..:.xx:x..::....:.::xxxx::..x::..x..........xx.:xx........:.:.......:..x::........:-x.x....:.:..:.......:..x:...xxx.:..------.:............x:..--------------------------------------------------------..::...:....------.x.....:x..xxx..:x..-------.x..:.........:.::x..:..:......:...x.x.x.... 77M2I18M1I206M1D35M6D18M56I12M6I20M7I44M 297/430 69.1% 502/94230402 0.0% 79/430 18.4% 5745346 NA +13408 chr4 + 190214555 23076957 23076956 23077393 437 TAGAACTTCTTCTAAAGTCTTCTGATAGATGTTGACGGATCCTATGCCATCAGCAGGTCAGTGTAATCCATTGTACC--AGAGTAGATGGATAGATG-ATGGGCTCTTCCTAGATAAAACTGTGGAAAGCAGAGAGGATTTACCCTGTAAAACTGCTGCATTTTGCTTGCTGCTACAAAAGTCTCTCTAGCTCTCCCTCTCTAAAATGTTTTCAGGTACTTAAGTTTATAATGCAGAAAGTGCTACCACCACTAAGGGTCTCTGTAGTTCGTCATAATTGTGGTTCTTAAATCAGTTTTTAAAGTTCTTTTTATTCAAAATAGAATATAGCATCTCCTCCCACCTGAAGGGCACAATTAAATAT-----------------------------------------------CTCCTTTTTGGTCTT---------------------------GGAAGAAATTCAAGCAAGCATCATTTGGCAACATGCCTTAGGTCATTATAAACTTTACTAC chr4 - 94230402 17329080 17329079 17329586 76900817 76900816 76901323 507 TAGGCCTTCTTCAGAAAGATATGGGAAGATGTTGATGTATCTCATAAAGCTGACAGGTCATCGCTACCCATTGTCTCGCAGAATAGATTAATAGATTCATTGGTTCTTACTAGACAAAAATGTTCACAGCAGATAGAATTTATCCTGAAAAGTTGCTGCATTCTGCTTGCTGGTACAAAATGCTCTTCAGCTTTCCATCTTTCAATTGTTGGCAGGTACTCAAATAAGAAACACAGAGAGCCAGTTTACAGTTATGGGTCTCTGTCCTCACTCATAATTATAGTTCTTAGATAGATTTTTAAAA-GCATTTTGTCCAGAATAGAACATTACATAGACCCC------AGGGGCACAATTAATCATTCTCCAGATATGTCAATGGTGTGATACAAGAGTTGGTAAATTTAATGCTTTTTTTTACTTTTTTCTGGTGCGTTGCATGTaaaaaaaaaaaaaaaaaaaaaaaaaGGAATTATTTGGCAATACACCTCAGATCATTACAAAATATTCTAC ...:x.......x:..:xx.x:x.:x.........:.x...::..:xx:::::.......x:.:x.:.......x:.--...:.....x:......x-..x..:....x.....:....x...xx.x......x..:.....:....x...::.........:.........x.......xx....::....:...x...:.x..x....xx........:..:.xx:x..::....:..:xxxx::..x::..x..........xx.:xx........:.:.......:..x::........:-x.x....:.:..:.......:..x:...xxx.:..------.:............x:..-----------------------------------------------..::.....:x.:..---------------------------::..:...xxx..:x.:.x..:.........:.::...:..:......:...x.x.x.... 77M2I18M1I206M1D35M6D18M47I15M27I61M 296/430 68.8% 507/94230402 0.0% 84/430 19.5% 5747877 NA +3675 chr4 + 190214555 23088029 23088028 23088101 73 TGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:..:..:xx:x..:...........::x...x.xx.x........:.::.........:......x...... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 4890902 NA +7250 chr4 + 190214555 23131164 23131163 23131325 162 TTTTTATTCTTGTCTCGAAATTTATTTTTGTTAGTTTTGCAATATTGTAGCTTATCCAATTTACGTCTGCCCTTCAAAGGCTTATATTCTTATTTTTTCTC-------------TGTAGTCTCTAATTTGATCTGGGACTAATGTCAAATCTTTTTTCTACAGCTCTGGTACATA chr4 - 94230402 17354865 17354864 17355034 76875369 76875368 76875538 170 TTTTTGTTCTTGACTTGGAATACCTCTT-----GTCTTATAGGATTTGAGCTTATCCAATTTATACCTGCTCTTCAAGGATTTCTATTTCTTTTATTTCCTGACACAGATTTGATGTTATCTCTAATTTGATCTTGGACTGATGTCAGATCTTTTCTCAACAGCTGTAGAACATA .....:......x..:.:...x:x.:..-----..:..::.:x...xx...............:::....:......:.::..x....::.x..x....::-------------...x:...............x.....:......:.......:..x......x.:.x..... 28M5D68M13I61M 118/157 75.2% 170/94230402 0.0% 18/157 11.5% 5776299 NA +3239 chr4 + 190214555 23133475 23133474 23133557 83 CTGCAACCTTCGCCTCCTGGGTTTGAGTGATTCTCATGCCACAGCCTCTGGAGTAGCTGGAACTATAGGCACCTACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.......::....x...x..x.x.x......:.x:..............:.x.::.--.....:::. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 4936349 NA +6793 chr4 + 190214555 23136569 23136568 23136998 430 ACTGTAGCAGGCAAAATATT----------GAAGGAATAGAAGTGTCATAAGCCACAAGATTGGCCAAAAATATATATTAGCATGTCCTGACAATCATTG--TTTAAAAAGTAAA----AGTCAAAAACTAGTTTCTAGTGTTCT---AGCAAAAGCAGAAATGCTTTAA---GCAAATAATTTCAAGTTATTTCCAGTCCAATGTTGCACATTGACTTTATGTGCACAGAATGTAGACATCATTTTGACATGTTGCTGATGGAAGAGATGCAAAGAAATAAAAATGAGCAGAAAAGAGGTATT--------TCAAAGGAGGCATATATATATATATATATAATTTTTTTAAGAGAAATTCATATGTTAGAGGTTGTTTTCAGTAGTTTCCAAGTTTTTTAAAGGATC-CTTCTTGAGGAGACTTTATATAAAACTCTCCATCAATGCACAGTCCTTTCAG chr4 - 94230402 17358227 17358226 17358662 76871741 76871740 76872176 436 ACTGCAGCAGATGAGAAAGCAGTGGAGAAAGAGGAAATGGAAATGCTGCAGTACA-AAGCATGGTTAATAATATTTATTAATGCATGCAGAGAACtattaaattaaaaaaattaatGGAGGTCAAAAGCCAGCTTCTAATTCTCTTCAGGCAAAAGAAAGAATTTATTAAAAAGCAGA------AAAGGTATCCACAGAGAAACTTTCCCCATTTGCTTTATGTGCATGAAATATAGACATCATCTTGACATTCAACTGATGAAAGAGAAG-AAAGTAAAATTAATGCTCAGGCAGTTAACGTTAGCCTCACTGGGAGGGGGGACATGGA-----------------ACCCAGCACGCTCTGTTTGACACAGGCTGTTCTGGAGATCTGTTAAAGTTTGCAAAGTGCCATTTCCTAAGGAATCTTTTTGCAGAACCAGCTTTCATCACACAGTATCTTCAG ....:.....:::.:.x.x:----------..:.:...:...:..::::.:xx..-...xx...::..x.....x.....:::::.x.x..x..::...:--..x.....:.x..----:.......:.:..:.....:.x:...---:.......x.::...x:x....---...:.------x...x...::x...xxx..:x..x.x....x:...........:::...:..........:.......x:x:......:......x.-....x..x.xx....xx...:x.:xx::::..--------.x::...:..x.:..:x.-----------------x::x..x:x:x.:::.x..x:.x...:....:.x::x.x:.x::..:x...x:....x::.-:...:.:....:x....x.::.:...:xx.:x...x::......x::..... 20M10I25M1D44M2I13M4I26M3I22M3I5M6D87M1D32M8I18M17D61M1I52M 249/405 61.5% 436/94230402 0.0% 56/405 13.8% 5778342 NA +3194 chr4 + 190214555 23157578 23157577 23157651 74 GGCATGTTTTACACACACACACACACACACACACACACACACACACACACACACGTATATGTATGCACATATGA chr4 - 94230402 38535879 38535878 38535952 55694451 55694450 55694524 74 GGCAATTTTCTCAACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGA ....xx...:x..xxx.:.:.:......::...::x:x.:.....:.......:..:..........:.:.x.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -15378301 -78852101 +46421 chr4 + 190214555 23161807 23161806 23162635 829 GAGTGGGTCAGATCAACTAATGTCTTT-----GCTCCCTTGGGAAGCTTGGGGTTACCCCTAGGTAGTCAGATAGAGTAGTAGGTTGGCCATTT-AATCTCCCCCCATTCTCCATTTCACTTCCTTTCTTGTGAACACAAAAGAACTTTAAGTGATCTGTTCGCGGCATTGAAATGCCAACCTTAGTTGGTACTTTGAAAACTCAAAGCCTTTTACAAGATGAATAGCAAACTGTGGATGACAGCTCCTGTGGAGGCATTATTGAATTGCAGCCCTGATGGCTGCATTACTTTGGATTTAGATAAAAGACTCCATACAAGACAAATGGTAGGAGGACATCAAACAAGACTGTGTCCATACAGTGACAGAAGCAATCCAATTGAAGAAGCTGTTGATTTCCCCAAGGCTACATACTATTTCTTCCTGAGTAATTTATATTAAGAAACTAAAGATTGTATATTCATCTATTCATCTTCTATTTATACTTTTCTCTAAAAATACAAATGTCCAGTTGTCAAATCAAAGTCCTACTTCTCTGCTCTTGCCTGGAAAAGAAATATCGATACAGGAACATGTTAATTATTTTGTAT-TGTGTTTTATTTAACCACAATAGCAGTGTGTGTAAAGGTTATAGACTGAGAGTTACAATCTATAATGATCAGATAAAAAGATTAGTCAGCAAATCGATAGTTCCCTGTACCAACAGGAAGCTTGGTATATTCAAGGCAACAATGAGTACAAAGGGTACAGATAAACATCAGGCACCTTTATTTAGATGAAAACTAATTCTAGAGAACTTCCACCACTTCATTAATTATGTACCAACCTTCAGGAG chr4 - 94230402 17365064 17365063 17365867 76864536 76864535 76865339 804 GAGTGGGGCTGATCATCTAATTACCTTCTGACACTTCCATGGTCTCTTT----TTGCACCCAGGTA-----------CAATAAGTAGGGCATTTCAATATCAGTTCATCCTCAATTTAG--GCCTGTTTTGAAAATACAAAAGAACCTTAAGTGATCTGTCCACAGCATTGAAATACCAACCTTAGTGGGTACTTTGAAAACTCAAAGGCTTT-ACAAGATGAATAGCAAACTGTGGATGACAGCTCCCGTGGAGCCATTATTGAATTGCAGCAGTGATGACTGCATTGCTTCGGATTTAGATAAAAGACTCCATACAAGACAAATGGTAGGAGGACATCAAACAAGACTGTGTCCATGCAGTGACAGAAGCAATCCAATTGAAGAAGCTGTTGATTTCCCTAAGGCAACTTACTATTTCTTCTTGAGTAATTTATATTAAGGAACTAAAGATTGTA--------TATTCATCTTCTATTTACACTTTTCTCTAAAAATACTGCT-TCTAGTTGTCAAATAAGAGATTTACT--TACAGTGTTTACTGGAAAGGAAATAGCAGGATTGGAACTTGTT-ATATTTTTGCATCTGTGTTTTGTTTAGCCTCAGTATCACTATGTCTAAAAGTTATAGACTGAGAGTAACAATCAATACTGATCACATAAAAAGATTAGTCAGCAAATCAATTACATAC-ATGGTAACAGGAAGCACCGTGCACTCAAGACAAGAATGAATACAAAGGGTACAGATAAACATC-GTCACCTTTATTTAGATGAAAGCTGATTCTAGAGCACTTCCACTATCTTTTTAATAATGCACGAACCTTTTGGAG .......x.x.....x.....xx.:..-----:..:..x...xxxx:..----..:.x..:.....-----------:.:..:..x..x.....-...x..xx::...:...x....x:--x...x.:...x:..:..........:.............:.:.:..........:...........x....................x....-..................................:......x.................xx.....:.......:...:.................................................................:..........................................:.....x..x............:..................:..............--------.................:..................x:x.-..:...........x.:..x::....--.x::x.x..xx.......:......x.::x.:x.....x....-..xx.....:..-........:....:..x..:..x..x.:...x....:................x......x...x......x.......................:..x::x:x.-:.:x:..........x:x..::.:.....:...x.....:.......................-.x...................:..:.........x........:.::.:x.....x...:..x......:x.... 27M5I17M4D13M11D17M1I24M2D92M1D243M8D40M1D26M2D43M1D12M1I105M1D63M1D75M 665/797 83.4% 804/94230402 0.0% 39/797 4.9% 5796743 NA +4480 chr4 + 190214555 23164186 23164185 23164373 188 TCTTCCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTT-CTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCT--TCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTT chr4 - 94230402 59424944 59424943 59425124 34805279 34805278 34805459 181 TTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCC---------TCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTA-TCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTCATT .:.....:.x.:.......:..x..:.:.....:....xx:x....xx.:.::.:x.x:...-.....---------......x.:.:x...:.x.x::....:....x.x...:x-..x...x.x..::x:..:.:x.x..::...:.:.......--......:::x..::.xx..:.:..:...:x.. 62M1I5M9D39M1D40M2I32M 114/178 64.0% 181/94230402 0.0% 13/178 7.3% -36260758 -57969644 +3024 chr4 + 190214555 23164205 23164204 23164277 73 TTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCTTTCTTTCCTTTCTTCCTTCCT chr4 - 94230402 7499882 7499881 7499954 86730449 86730448 86730521 73 TTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTCGTCTT .....x....:.:......x:..:::::.....:x...x..:.:xx...x.:.:....::......:.x..:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 15664323 NA +4414 chr4 + 190214555 23164210 23164209 23164373 164 TCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTT----CTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTT----TCTTCCTTCC---TTCTTTCCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTT--TCTTTCCTTTCTTCCTTCCTTCTTTCTT chr4 - 94230402 59424944 59424943 59425120 34805283 34805282 34805459 177 TTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTT .:..:..:.x.:.......:..x..:.:.....:....----....xx.:.::.:x.x:...x:.:.:.....:x.:..x...:.----.:...:..:.---:.:.x..x...x.x..::x...:.:x.x...:..::.:.....:.--.......::x..:..xx..:.::.:... 38M4I43M4I10M3I45M2I28M 105/164 64.0% 177/94230402 0.0% 13/164 7.9% -36260734 -57969668 +3155 chr4 + 190214555 23164249 23164248 23164321 73 TTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCTT chr4 - 94230402 7499882 7499881 7499954 86730449 86730448 86730521 73 TTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTCGTCTT .....x....:.:......x:..:::::.....:x...x..:.:xx...x...:....::..:...:.x.... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 15664367 NA +3308 chr4 + 190214555 23164313 23164312 23164384 72 TTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCCTTCCTTCTTTCTTTCCTTTCTTCT chr4 - 94230402 7499882 7499881 7499953 86730450 86730449 86730521 72 TTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTCGTCT .....x....:.:......x:..:::::.....:x...x..:.:xx...x...:....:...:.....x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 15664431 NA +32979 chr4 + 190214555 23169692 23169691 23170862 1171 CACTGTCTTCCGACAGCAATTTCAGGCTCCTGCTGCCTGCCCCGTGACCATCTCTCGTTAAACCTCTGTGAGTAGCCCTGCTGCAACCATGAATGATACT-CTGAGGGCTTCACACAGGCTGGGTTTATTGAGCTGCATTATAGGAGACTATATCTCAGATGGCCCCAGTGCAGCCAAAACAATCTGTCACTTTTAATTCTTCCTGTCACCTCATTAAGTATATGGCAACATTGAC-------------------------AATAAAACACATTTTCAAACA--------AACAACACACGCACCACCCCAATTGCAACATTTCCTCCTCTTATATTCAGATGTTGTTATAAATATCCAGTCATTGAAAGATTCATTGAACAAACATATGTGCCAGGGTACTGTATATAACTGACAGAGGCACAGAATAGTCTCCATGGACACATAAAGCAATTAAAAATAACTGTGCTTCCAAGCGGGCTACTGTAATAC-AAAGGTCATGCCCATAAATATGAACAGGGTGGCAGTAATGTCTCTATCCAAATATACCCCCAAACACATAACTACAACAGTTCAGAACTCAAAGGTTAATGTAAAAAAAAGAAATCCCTGAAATTATTCCATATTCATCTTATGCCTTTTACTTCTTGTGGTCTTTTCATCAAAG---GTTAATA---TATGTGAATACAGTGGGAAAATAGTATCAAGGCCAAATGTGTGTCATCAGGAACTATTTTACTCAGTGAAAAATATTTACCCT---TGTACATACGATAAAATGAAGGAGCTGTAGTACATTTTTTGTGAAAGAAAAAAAATGTCTATTGCTTCCTCCCCCTTTCTTTACTAGGTTGCTTGTTTTTACATTAACTGCACTGAAGTTTGAATTTTACTCAAAGCTCTAGAGAGACTGTTCTGAGAGCCGGGATAGTTTTTGCAGTAACACACTGAG--TGTGATAATAAGGTTTATGCATGGTTGTAAAGAATGTGCTGACAGATGGAAAAGAAGCCA-CCTCAGTCTGCACAGTATTCATTTTTATATATATTCAAA------------AAATTCATACAACACCTGACACTCATTCAAACAGCAGTTCTTCCTCCTGCTGTCTCCTGGAAACAGAAATATTTTAGAGTATATAGAAAAAAATCCAACCCCCAGTGGACTGATTCACTAAAATTTCAAGTTCTGCGCACATCAGAGTAACACAGGCTCCT chr4 - 94230402 17369905 17369904 17371074 76859329 76859328 76860498 1170 CGCTGCCACTTGAAAGCTGTTCCTGCTCCATGCTGCCCACCCACCACCAGCTCCTCTTCAGACCTCCACGAGTACCCTTGCTGCTGCAATGAATCACATTGCAGAGGGCTTTCCACCAGCACAGTTTATTGAGCTTTATTATAGGAAAATATATCTCAGATGGCCCAGCTGCAGCCAAAACAATCTGTCATTTTTAATTCTTCCTGTCACCTCATTAGGAGTACAGCTAGAGTGACNGTNaanaaaaaaaaaaaaaaaaaaaaaaaaaaaGAGCTATGAACAACAAAACCAACAGCAACAGCAAAACCCAAAAT---ACATTTCCTCAGCTCCTGATCAGATTTTAACATAAACACCAA--CACCAAAAGATTCATTGACCAAACATATGTGACTCGGTGTCGTATACAACAAAGTGACATGTAGAATGGTCTCAGTAGGCATATAAAGCAATTAAAAATAACTGTGCTTCAAAGCATTGTATTATAACATAAAAGGTCATCCCTATAAACATGGAAAGGATGACTGTGTTTTTTCCA-ACAAATG-GCAAACAAATGCTCAACTAGA--GGTTCTATTCTCACAAGGGATTCTTCAA-----AAATCTCTGAAAATAAGACATATCC------TGTATCATTCTCCTTCAGACTGTGTC--TGAAGTCAGTTAATATTTTAAATGGATGTAATCGG-AAATAATGTCAAGCCTAACGACGTGTTAGAAAACAATACTGTACTAAATACAAAATATTTACCCTGTGCATCCATACGACAGAGAAGGAAACCCCTGGGTAATCATCTGTGA---AAATGAAATGTCTATTTTTAACTCCTAA----------AGCTTGCTTGTTTTCACATTAA-TGCATCAAAG-TTGTATTCCAATGGAAGCTGCAGAGTA--CATTTTGAGGACTCTGATAATTTTTGCAGTAGCACTCTGAGTTTGTGATAATAATATTTATGCACAGATGTAAAGAATGTGCTGACAGATTAAAAAGGAGTTAGACAGTGTTTGCACAGTGTTCATTTTTATTTAAGAGAAAAAAAAAAAAAAAGAAAGGAATACTACACCTGGCTATTGAACAAACAGC-----------------TTTTTCAGAAGTGAAGATAGTTCACTGTGTATCGCAACTCCCTAAACTCCC--TGGACTAATTCAA-AAAAATTCAATTTATAGGCAAATCAGAGTATCACAAGCTTTT .:...:.x:::..x...x:..:.x.x::.x.......::...xx::x.x::::...x.:.:.....:::.....x..:......x:.x......x.:.:.-.x........:x...x:..xx:............x:.........:.x.................x:x.....................:..........................:.x:..::..x.x.x....-------------------------..x....x.x.x:.x::....--------....:..xxx...xx....x..x.---..........xx..:x.:x......x..:x:.....:.:.x.--..:::.............x............x.xx...:::.....:...x:.xx..x::::.....:.....x:.:.:..:............................x....:xxx..:.:...:.:-.........x..:.....:...:.x...:..:.x..:x.x.:..:.-x.....:-:.xxx....::.x:.....x.--:....x:xx....x.:.xx.x.x.xx..-----.....:......x..xxx.....:.------..:x.:x.x..:...xx.:::x.x..--::...---.......---..x:..:..::.:.x..-.....:.:.....x.:..xx::....:.xx.::x.x..:.x....x.:.:x..............---::.x.......:.:.:x:::::.x.:x.:.xxx..:x.:.....---...x:...........x:.xx....:xx----------..x...........:.......-....:::...-...x...::.x.x:.....x:....x:--::..:....::.:xx....:...........:...x.....--...........x:........::.x......................x:.....:..::.-x.xxx..:........:...........x..x:xxx...------------...xxx....x.......:.xx.::xx........-----------------.:.::::...::::.:...x..:.xx..:...x.x..xxxx::x...:...--......:.....x-....x.....x..x.:x...x.........x....:...::. 100M1I135M25I21M8I24M3D42M2D130M1I46M1D7M1D21M2D28M5D25M6D26M2D5M3I7M3I17M1D65M3I44M3D28M10D22M1D10M1D27M2D41M2I60M1I39M12I35M17D51M2D13M1D42M 769/1111 69.2% 1170/94230402 0.0% 119/1111 10.7% 5799787 NA +3229 chr4 + 190214555 23182518 23182517 23182592 75 TTTATAAGATACATTTTTGCATTATTCCTGATATTTAGTTAGTATGAATAAAATTGGTATAAACATTTGTGTACA chr4 - 94230402 31711171 31711170 31711245 62519158 62519157 62519232 75 TTCAGGAAAAGCTTTTTGTTATTATTCCAGATATTTAGTTATTTTGAACAGTTGTGGTATAGACAATTGTGGACA ..:.x:.:.x:.x....xx:........x............x.x....:.:xxx.......:...x.....x... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% -8528653 -85701749 +3012 chr4 + 190214555 23184121 23184120 23184162 42 TTTTTTTTTTCTTTTTTTTGAGAGGGAGTCTCGCTCTTTTGC chr4 - 94230402 5847654 5847653 5847695 88382708 88382707 88382749 42 TTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ............::...........xx....:....:..... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 17336467 NA +27732 chr4 + 190214555 23209224 23209223 23209751 528 TTCCCTCAGAGGTCTGAAA-TGACTTCCTTACATTTGATAATGGA-----GTT--AGAAGTTATTTTGTGTCCTTAGAATCTCAGGTAATACCATTAATGCTGCATAAAACATCACAAAATACCAGGATATCAAACCAAGTAGCAATTACCAAAAACATTTTTCTGATACCTCCCCAGATTTTCCTTTAGGGAGTGCTAACTCAGTAAGTGTTCACTATGCATAAACAAAGCACAGGCTATAACTCTGCAAAGAACTTACGGTCTTTTCTAAAGTGTTTTCCCTTGTTTGATAAAATAGTCTTTGGGGGAAACTCTAATGGACAAAAGCTAGAGATCCAAAGAAAGGAAACCTGATCCATTTGAAAGTGAATAGGGGACTGCAGAGAG-AAGTAAAAAAATATGCTGCTGCTCACTCAGAAAGTGCTGACTTCCTCTAGTAGGCCATCTTATAGGTCCACCTTATACCACATAATAGTGTAATTAAAAAGCGCTGATGTTGGGTACCAGGAAGAATCTGCCCTCTTCAACCCTTGTT chr4 - 94230402 17373960 17373959 17374490 76855913 76855912 76856443 531 TTTCTGTAGGGATTTGAAAATCATTCCCTCACAATTTATTAGGGACCACAGTTTAAAACATTTTTCTGTACCCAAAGAATCTCAGGTGATGCCATTAAAACAGTGTAAAATACCACAAAATACCAGGAGATCAAACCAAGTAGCAATTATCTAAAGTGTTTTTCTGGTATCTACCCAGATTTGCCTTTTGGGAGTGCTAACTTAGTAAATAATCACTATACGTAAACAAAGCATTGGCTATAACTCTCAAAAGATCTGAAAATCTTCT-TCAAGTGTTTTGCTTTGTTTGACAAAATACTCTTT-GGGGATGTACTAATGGAC-AAAGCTAAAGATCCAAAGAAAGGGAACCTGATCCATTTGAAAGAGAATAGAAGGCTGAAGGAAGCAAATGTAAAAATATGCTGGTACTCACTCAAAAAGTGCTGACTTCCTCCTGTAGGTCATCTCACCGGCCCACCTTTTACCACA-AAGAGCATAATTAAAAAGTGCTGATGTTCTCTGTTGGCAAGG--CTTCTCTTTTCAACTCTTGTT ..:.:x:..:.:.:.....-.x.:.:...:...x..x..x.x...-----...--.:.x:..x..:...::..xx............:..:.......x:.x.::.....:.:...............x....................:.x...:::........:..:..x.........x.....x.............:.....:.:x.......:.:...........:x............xx.....x..x.x::....:.-.x.........x.:........:......x.....-.....x::x.........-.......:...............:...................x......::.:...x..::..-..:.:x............x.:........:.................:x.....:.....:.:x..:.......x.......-..x..::...........:.........xxx.::::.x...:--..x.:..:......:...... 19M1I25M5I3M2I213M1D35M1D18M1D64M1I82M1D42M2D21M 413/522 79.1% 531/94230402 0.0% 15/522 2.9% 5835264 NA +4700 chr4 + 190214555 23222570 23222569 23222738 169 TCCTATAAAGGTCGTATATAGATACACACACACATATACATATATATTATATACATATGTAT-TATAAATACAAACCAGGTAGATAGATAGATAGCAGGGGCAAAGCCAGTAAATATATGGAATGGCATATATATGATGTGTGTGTGTATGTGTGTGTGTGTATATATAT chr4 - 94230402 9334467 9334466 9334599 84895804 84895803 84895936 133 TCCtatata-----tatatatatatatatatacacacttatatataatgtatatgtatgtatatatatataCACAC--------------------------------ACTAAATATATGCTATACTCTATATAGGAACTGTGTGTGTGTGTGTGTGTATGCCTGTATAT .......x.-----......x...:.:.:.:...:.:x:.......x.:....::.......-....x.....x..--------------------------------.x..........xx..:x:x......x..xx.........:.........:..:x.:..... 9M5D48M1I13M32D62M 101/132 76.5% 133/94230402 0.0% 38/132 28.8% 13888103 NA +11335 chr4 + 190214555 23224019 23224018 23224226 208 AAAATGTGTCCTGGATGAAATGAAAATGCATTGTTTTACATAAGATATGGCAATTTTG-AAAAATACATTGATTTAATGTACTTAGGCCAGTGAAAAATCTGTTGGTTTAAGCTAACTGCCGTTAGTTTCAATTAAAATGTATCGATTTGGGTAAATGTTGGTTAGAATAAATGTTGCTTGACTGTGGAAACAGACCATTTGCTTAAGC chr4 - 94230402 17377735 17377734 17377940 76852463 76852462 76852668 206 AAAATGAATTCAGCTAAGAATAAAAAAATACC-TCTTATACAATATATAGCAATTTTTTAGCAATGTATTGATTTAATGTACTTAGTTCAGTGAAAAAACTGTTAGTTTAAGCTATCTGCCATTAGTTTCAATTAAAATATATTGATCTGAGTAAATGTTGGTTAGATTAAGTGTTGCCTGACTGTGAAA--AAAATATTTGCTTAAGC ......x:.:.x.xxx::...:....x::.::-.:...:.:..x....:........x-.:x...::...................x:..........x.....:..........x.....:.................:...:...:..:................x...:......:........:..--.:.x:............ 32M1D25M1I131M2D17M 163/205 79.5% 206/94230402 0.0% 4/205 2.0% 5846284 NA +3383 chr4 + 190214555 23232504 23232503 23232672 169 AGGAATTTTCTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTTCTTTTCCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTGTCTGTCTAGCTGTCTGTCAATCTGTCTATCTAGCTGTCTGTCTACCTATCTATCTTTTTTTATACTT chr4 - 94230402 45185571 45185570 45185735 49044668 49044667 49044832 165 AGGGATTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTC--TCAGTTTTCTGCTTCATT--CTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTT ...:....x:x:.:x..x..:x.:..::..:..:..xx.:--.:xx......x:...x..--..............x....::x:.......::.::..:x::::x..:xx:.x..xx.:.:.x:x...xx...x:.....x....x.:.:.:x.xx.:.:....x... 40M2D18M2D107M 98/165 59.4% 165/94230402 0.0% 4/165 2.4% -21953067 -72277335 +3397 chr4 + 190214555 23232509 23232508 23232580 72 TTTTCTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTTCTTT--TCCTTTCTTTTCTTTCT chr4 - 94230402 22629304 22629303 22629377 71601026 71601025 71601099 74 TTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .................:x.x...x.x...x..:......x..:x:..x......--.:.:...:.:....:.. 55M2I17M 55/72 76.4% 74/94230402 0.0% 2/72 2.8% 603205 NA +3006 chr4 + 190214555 23232520 23232519 23232575 56 TTCTTTTCTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTTCTTTTCCTTTCTTTTC chr4 - 94230402 15070429 15070428 15070484 79159919 79159918 79159974 56 TTCTGCCTCTTCTTTTTCCTTTTTCATTCCTTTTCTTTTTTTGGTCCCCTCTTTTC ....x::::..::....:.......x..:...........:.xx...::....... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 8162091 NA +3059 chr4 + 190214555 23232533 23232532 23232601 69 TTTTTCTTTTTCTTTTCTTTTCTTTTTCTTTTCCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTT chr4 - 94230402 9693769 9693768 9693835 84536568 84536567 84536634 67 TCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTC--CCTTTCCCTT .:..:..:.::....:.:...:..:...x:.....x.:...x:.x.:..........--:.....:... 57M2D10M 48/67 71.6% 67/94230402 0.0% 2/67 3.0% 13538764 NA +3114 chr4 + 190214555 23232548 23232547 23232608 61 TCTTTTCTTTTTCTTTTCCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTGTCT chr4 - 94230402 35007545 35007544 35007605 59222798 59222797 59222858 61 TCTTTTTTTTTTCTTCTTCTTTTTTTTCCCTCCATTTCCTCCTTTGCTTAGTTTACTGTTT ......:........:.:....:.....::..:x....:.:....x:..xx:..x....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -11774997 -82455405 +3007 chr4 + 190214555 23232628 23232627 23232683 56 TGTCTATCTAGCTGTCTGTCTACCTATCTATCTTTTTTTATACTTAATCTCATGCT chr4 - 94230402 65104418 65104417 65104473 29125930 29125929 29125985 56 TGACTTCCTGGCAGTCTGTCCACCAATCCATCTCTCCTGAGACTTAATTTCATGCT ..x..x:..:..x.......:...x...:....:.::.x.x.......:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -41871790 -52358612 +11224 chr4 + 190214555 23235803 23235802 23236292 490 GAAATCGAGGTCCTCT-CATTTGGAGTCCCTCCAGTTCAGGCAATTCCTGAAGCCCTTTGTCACAGGAATGATTTTCTTCATTGCTCCAGGAGGCAAGCTTCTGAATAAGTGCTTCCCAGAGGGAGGAGGAAGTTATTTGGAAGAGGCTGGACTCTGTTAGATAAGTGAAAACTTCTTATAAATACCTGACTT----------------GGAAGTGAGAGAGGAAGGTTTTCAAATCAAAGTG-CTAAATTAAGAAGCTTAAT---TTTGGCACTTCAGCTGACTGAGTTGTTGATGGGAG-------GGTTTATGCTAACAATTCCCCTGCATCCACAGGGGATCAGGAGCAGAAGCTGATAAGATAGCTTCAGGGGAACGAAAGGACGGTCTTACTCCAGTAGCTCTGTCTTCAGAAAGCATGAGA----GGAGT---GCTGAGTCTGGGTCTGTTTCCGTCCCATGCTGGCACA-----CAGATAGCTACAGCGTACTGACT-TCCTTTCCACTGCACTCTCCTTGGA chr4 - 94230402 17380961 17380960 17381482 76848921 76848920 76849442 522 GAAAGCAAGATTTCCTTCATTTGCACATATTCTAGTTTTATCT-TTCCTAATTTTTCTAGTTCCAGGAAAGTTTTTCTAAA--GATGAAGAGAAGCAGAATATGGGCAAACATTCATGAGAAAGGAGAAAAACTATTTACAGAGAAGCTGAGCTCAGTCAAAGAAGTGACTACT-CTAATAAATGTCTGACTTTTCCCCCCTACTTTCTGGA---GAGAGATTCAGGGTTAAGAAATAAAATGACTAAATTAAGCAGCTTAATAATTTCTGCATTTAAGCTGACTTGGTGGCTTGTGGGAGTACTTAAGGTTTATGCTAGAAATTCCCTTGCATCCC--AGGGATCAGAAGAGGAAGCTGATAAGATAACACGAGGCACGGGAACAGTAAGTCTCACTCCACTGGCTCTGCCTTCAGAGAACATTAGCAGCTGGAATGAGGATGAGTCTAGCTTTGTTTCAAAAGCATAAAAGAAGAAAAGTCAGATAGCTACAGAGTACTCCCTATAGTTACTGCTACATGCTCCTCTGA ....x.:..:.:::..-......x.xx:x:..:....:x:x.x-.....:.xx::::.x..:x......x.x......xx.--.x.xx..::::xx..xx.x..:::..::::.:x:x...::.::..::..x.xx..xx::...:....::...x..:.:.x......xx...-..x......::.......----------------...---......xxx...x..xx:..x:...:..-..........x........---..:x...:..x........x:..x.:.x:......-------...........:x.......:.......x--:........:..x:...............:.x:x...x:x:x...x:.xx:....:......x.:......:.......:.:...x..x----...:.---.x.......:.x.:......x:xxx...:xx:.x.x.-----.............x.....xx..-.xx..x.::..:..:x.....:x.. 16M1I26M1D37M2D91M1D18M16I3M3D28M1I19M3I35M7I29M2D89M4I5M3I37M5I23M1I25M 321/481 66.7% 522/94230402 0.0% 50/481 10.4% 5854842 NA +3121 chr4 + 190214555 23249904 23249903 23249983 80 CTATATCAGCATCTTTCTCAAAGCCTCTGGTTTGTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 53202537 53202536 53202616 41027787 41027786 41027866 80 CCATATCAATCTCTTCCTCGCGTTCCTAGGTGAATGTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTT .:......::x....:...:x:x:.::x...xx:.x:....:.::.....:.::............::.:x..:...... 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% -29952633 -64277769 +3291 chr4 + 190214555 23249906 23249905 23250018 113 ATATCAGCATCTTTCTCAAAGCCTCTGGTTTGTCC---CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGTCTTGCTCTGTCGCCAGGC chr4 - 94230402 92468467 92468466 92468582 1761821 1761820 1761936 116 ACACCGGCGTCCTCATCGTCTACCGTGGTTATTTCGGGCTTTTTTGGCCTTTTTCTTCTTTCTTTTTTTTTTTTTCCTGGGTGATGCTTTGAGTCCAGCCTGCTCCATCTCCAGGC .:.:.:..:..:.:x..:xxxx.:x.....xx.:.---.......xx::.....:..:...:.............::.xxx.xx.x:......x.x:x.:.....::..x...... 35M3I78M 72/113 63.7% 116/94230402 0.0% 3/113 2.7% -69218561 -25011841 +3103 chr4 + 190214555 23252271 23252270 23252329 59 CTTAAA---AAAAAAACAACAAAAAACAAAAACAAAACAAACAACAACAACAAAACAGTAAA chr4 - 94230402 70210870 70210869 70210931 24019472 24019471 24019533 62 CTTAAAGCTAAAATAATAATAATAAGCAAATAGAAAACAAACAACAACAACAACAAAGAAAA ......---....x..:..:..x..:....x.x....................x.x..x... 6M3I53M 49/59 83.1% 62/94230402 0.0% 3/59 5.1% -46958599 -47271803 +3120 chr4 + 190214555 23255531 23255530 23255634 104 ATATATATATATGTTTTATATACACACATGTATATATTAACTGTGTTATACACATATACAAATATGTATA--------TATAAACTATGTTTTATACATATATACACACAAA chr4 - 94230402 56330052 56330051 56330163 37900240 37900239 37900351 112 ATATATACATACATATTATATACACACATATGTAGTATAGATTTGTTATGCGCTTATATGAAAGCCCCTGATGATTGCTATGAACACTGAAAGACACACACACACACGCAAA .......:...::.x..............:.:..xxx..:x.x......:.:.x....::..x::x:x.:--------...:...xx..xxxx.:...:.:.:....:.... 70M8I34M 68/104 65.4% 112/94230402 0.0% 8/104 7.7% -33074521 -61155881 +16042 chr4 + 190214555 23264951 23264950 23265393 443 CTCAATTTGCAAAAGTTCAGATGCTTATTAAAACTAGCTCCAAACTCTG---AAGCCTTGCGAGTTTT-CTTGTCACTGCTTATATTTCAGTTTT-GAAAAATAACTGCAGGATGACTTAATTAATTGTTCCTTCTTTCCGTTTTCTGTCTAAAGTAGACGAATACCTATGCATCCGACAAATCAATGAGCTGTGGAACTTCCTACAGATAGATTAGTACATCTGTAGTTTAAAGACAGTTTGCATGAGAAGGGAA--------------------------------------------AAATATATTCCCATGAGGAATGTTT-AAGGGATCAATTCATAAGCAAAGAAAA-CATGCTATTCTCAGCAAGGAAACAATACATTTTGTATCTGTTGCTATGATTAATTACATACTACAGCTTGGAGAATGTTTTTAAAGGGCCGCAGTCAATCTTTTAAGACCCACAAGTTGACCTGCATTAAAAGCTGAAGA chr4 - 94230402 17385342 17385341 17385818 76844585 76844584 76845061 477 CTCAGTCTATGAAATTTAGGG-----ATTTGATCTGATTCAAACCTTTACATAAACCTTTTGAGACTTACCCATCACTGCTTACATTGCTGTTTTTGAAAAATAAGCTCAAGGCTATTTAATTAATTGTTCATTGTTTTAATCTCCAAACCCAGGTAGATTAATACCTATGCTGCCCACAGATCAATGATTTCTGGAGTCTCCTACAGAT----TAGCGCATCTGCAGTTAAAAGGCACTTTGCCTTagaaggaaagaaagaaagaatgaatgaatgaatgaacgaaagaaggaaagaaCAAACATATTCCCAGGAGGAACATTTTCAGGGATCAATTCACAAGCAAAGAAAAACATGCTATTCTCAGCAACGAAACAATGTACTTTATGTCTGCCACAGTGATTAATAACATGCTATAGCT---AGAGCATATTTAAAGGGCTCCA-TCAA--TTTTAGG--CCAAAAGCTGACCCACTTTAAATCCTTAAAA ....:.:.:::...x..x:.:-----...x:.x..:::..x..x..:.:---..:....x:...x:..-.:::..........:...x.x.....-.........x:x..:.::x.:..............x..x...:x:.:.:.x:x.:x.:.....:x...........xx..x...:........x:.x....:::..........----...::......:....x....:..x.....x.x......:..--------------------------------------------...:.........x......::...-x.............:............-.................x........::.:...:.:....:::.x:........x....:...:....---...:::.x..........:x..-....--.....:.--...x...:.....::.x.....xx..x..:. 21M5D23M3I16M1I26M1I114M4D42M44I25M1I27M1I68M3D22M1D4M2D7M2D31M 318/426 74.6% 477/94230402 0.0% 68/426 16.0% 5879609 NA +34813 chr4 + 190214555 23268349 23268348 23269465 1117 TTTACCAAATGTAATGGGCTGATTCTATCACCATATTTTAGAACATAAAATGTGTATTTGACTAACAGATATTTTACCTTAAATTGCTTTTCTTAGTGTATTACAAACC---TGTTTTCTGACACTGGTTATTACTTATTTCTACAGCCTTTATTAGAGGAGCAGTTAAAGAGTAACTTCCACTCTTAAAAAGGTTGATTTGTTTTGCTCCAGGAAGGAGTCTGGTGTGAAATGTTGAGACAAGCCTTACTTAAAGGGCAGTTGCCAGGTGACAGTAGAAATCATTCATCTCCTTCGTAT-----CCT--ACCTTACCTTTTCTTTCCCCATCTTTCTAACAGTGAAAGTAA-TTGGTTACAA-AGTCAGTATCCTTGCTTGCCTATTTGCAATGCTCTTTATTTTATCATTATTTTTTAATCCCCTCATTTCAAGAGATA----------------------GCCAATCATAGATGCAACCATGCACATCTATAAAAGAGAGAATGAAACAGGGACACTACATAATGGTTTTAATCATTGTAGTTAGCGTATTTTCCTCTTGTGCATTAGAAAGTTAGGCTAAGTTATTTAATTGTTTGCTGATTGTTAAGACATTTACCTTGTAAGGGCATTCATTATCTATTCAGAGAAA-------TTCTTCAGCTTACAAATGAAGAGACTTTCATTCTGGGTGCTTTTATATATTTAAAAATATTTTAGCTATTGAGGTTTCCTGTACTTAATCCAGTCTTTTACTTTCTTTCATGGAAA-------AAAAAGGGCAGGTCTAAATGCAAATTAACATTACTGTTTAAATATCACAGACCATTTTCTCTGAGCCCAGTTACAATAACTAGTAATTATAAAAATTGCTTGCCTTCGGCTTCCGGCTAAGCCAGTGCTAAACTTGTCCTTTTATTAGATCTGTCAGACTGAGTTAATTATCTTTATGATAATAGATGTGCCTTACCTCCAACAAAACAAATACACTTATAATTAGCTTTTTAGTTAGAAGTTTAATTTATTTATAAAGACTGTTTGTTTTCCTT-TTTGCCTGTTTTAAAAACCAGAGCATGGGGAGGGAGGATTTCTAGTTTATCAGGTTACCAGCCTGCTTACTAGTTTATAAAGACAGAGAGGAAAAACGACTCATTAT chr4 - 94230402 17387326 17387325 17388420 76841983 76841982 76843077 1095 TTAGCAAAATACACTGAGTTAGCCATATCTACATGTGGTACATAATGAAATTCAAACTTGAATGGCAAGTACTTTGC-----ATGCCTTTTTGTAGCATATAACCAATGATGTATTTTCTCAT-CTGGTTATTACTTATTTCTAAAACCTTCATTACACAAGAAGTTAAAAAATAACTTTCTCCTTTTAAAATGTTGATTTGTTTTTCTT--GCAGAGAATGTGCTGCAAAATGTTGAGGTAAGCATTAGTTAAAGGGCTACTACACCACGCCAGCAGGAGCAATTTACTTCTTATGCATATATTCCTGAACATTA---TTTTGTTCCCTTTCTTTTTGTGAATGGGAGCCACTTCCTTAGAGCAGACGAGGGCCTTCCTCCCCCCGCTCCAGCCCT-----------------TTCTTCACCTGCTCAACAGCAGGGACATGTTGAGGGCATGGGCAGCGGAGGCACACACAG-TCCTTCCGTGCATTAATAGATACAGTTGCACCAAATAAATGCAGTCTACAGACATTTCAAGCTGAAAACTCAAC--ATTCTC----TGTGTGTTAAAA--CTGCATTAAGCTGTTTAATTGTTTTGTGATTACCAGAGCACTTACCTTGTGAGGATATTAATTAACCAGGCATAAAGAGACCAAGTTTTTCCGT----AAGGAGAGAGACtgtttttgtttttgtttttgtttttgt-----ttttTAAGTTATTCCAGTTCCTTTTACTCATTCCAGCTAAATAGATCTTGCCTTGGAAAGAGAAAAAAAAAAAAAGGGTCTAAATGCAAATTAACATTACTGTTTAAATATCACAGACCATTTTCTCTGAGCCCAGTTACAATAACTAGTAATTATAAAAATTGCTTGCCTTGGGCTTCTGGCTAAGCCAATGCTAAACTTGTCCTTTTATTAGATCTGTCAGACTGAGTTAATTATCTTTATGATAATAGATGTGCCTTACCTCAAACAAAACAAATACCCTTATAATTAGCTTTTTAGTTAGAATTTTAATTTATTTATAAAGACTGTTTGTTTTGTTTCTTTTTCTGCTTTA-----CAGAGAA------------GTTTGGTTTTTAACAGGTTACTAGTCAGCTTTGTCATTTTTAA--------GAGAAAATAGACTCTCTAT ..x:.x....::.x..:.:.::::x....xx...:.xx..x.xx..:....x::x.:....x.::..::..:...:.-----..xx.....:x...::...x..x..:x---.:......x.:-....................x.:....:....x.x:..x.......:.:......:.x.::..x....x.............x..:--.x.::..:.x..x..::..........::....x...x.........x::.:.xxx::.x...:..:.::x...:.::..:.x:.:..-----...--..x...---...:x.....:x.....:.:xx.:..::..:x.-..xx...x.:-..x.::x:x....x..:x..:xx:.x..::x..-----------------..:..x.:.:x....x:xxx..:..:.----------------------.x..xx..:..-.x.xx..:....:xxx..x.x.x::xx.x.:x...:.::x:..x.x:.:.:xx:...:..x.xxx:x.x.:.:.--...:..----....::...:..--:.:x::....:.:...........xx.....:::.:::..:.........:...::...x....x.:.xx..x.:.:.-------..:...x.:----..:x::.......x.:x..x.xxx..:....:.x.x.x.-----.x...x..:....xx:...:.:.x....:.x.....::xxx..xx.::.x:.x......-------.....:::x:................................................................................................x......:..........:..........................................................................x..............x.........................x..............................x:..-...x:...:....-----.....x.------------:...xxxx....x........:..:.x....xx.x:...x...--------::.....xx.....x:... 77M5D27M3I11M1D86M2D88M5I3M2I6M3D33M1I10M1I33M17D27M22I11M1D74M2D6M4D12M2D78M7I9M4D39M5D59M7I275M1I13M5D7M12D43M8D19M 746/1046 71.3% 1095/94230402 0.0% 120/1046 11.5% 5881023 NA +3511 chr4 + 190214555 23278608 23278607 23278690 83 ATACATATATGTATACATATATACACATACATATATATCTG------TGTATATATATATACATATATACATATGTGTATATACATATG chr4 - 94230402 64944124 64944123 64944212 29286191 29286190 29286279 89 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG .:.:.x...:.....x...x.....x...::..........------.....x.x.x...x::.....:.x.x..:..:...::..... 41M6I42M 61/83 73.5% 89/94230402 0.0% 6/83 7.2% -41665516 -52564886 +3498 chr4 + 190214555 23278635 23278634 23278702 68 TACATATATATCTGTGTATATATATATACATATATACATATGTGTATATACATATGTATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .::......xx.::.:...:......x.....:..:x.:.....:x:.....:.....:....:.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -24888403 -69341999 +21786 chr4 + 190214555 23311689 23311688 23312276 588 TAGTGATATCCTTGTACTTTTCTAAAT--------AAAACTTACAGTAAAAGTGAAATTATGAAA-------ATACCTGGTTACTTGATGTATCAAAACATTTTTTCTTACAGTTTACATATAGCATAGTATTTTGTCTTATGTTCATTTTCATGCAAATTATCCTAATTG---ATATTTGAATTTCACTGTGATCAGTTTGTCACAGAGTCCAGCCAAACCACAGTATCCCACATGCTATGCCACCCACTGTCTCTAACCATTTTATCCTGTCAGAGGCAGATCAAGCAGCC-CTGAGTGTAATCATATCAAAATCGATTTTCATGGCTGAGAGAAAAATAATGGAAATTTCTCTAATGTAGTAAATGTATGTGTTCCTTTTGGTTAACCAAAATAGACTATATATCAGACCTGTCAAAATTAAGTTTTCTTGATTCAGTGCTCTTCCATCGACTTGTATACAAATTACAAAGGCATACTGTGGAGCA-CTATGATGCAATCTTCATGCTTCTCTGGACTGCTCC--TGTGTCTCCCTCACATGAATAATACCACCAAGTTACAAAGCTACAAGCCAATTTACAGTGTGAATCCCCAAGCAACCTTCTC chr4 - 94230402 17398641 17398640 17399223 76831180 76831179 76831762 583 TGGTGATCTCTTTCTAGTCCTACAAATGTCAGTACAGTAAATACAGTGAACAGGAGATGATGAAAGCTCAGAATCTTTTGCAATCTTCAATATCAAAACATTGT--------AATCAC-----------CATTTTTCCTAAGGCTCACTTCTTTGCTCAATACATTAAGGGTGTGTGCTTTAATCTTAGCACTTTTGGTTTGTGACAGAGTTCAGC-AAACCACAGTATCCTCAATTCAACACCACCCACCATTTCTATCCATTTTGTACTGTCAGAAGCACATCAAGAAGCCTCTGAGTGTAATCACATCAAAATTGATTTTCATGGCTGAGAGAAAAATAATGGAAATTTCTCTAATGTAGAAAATGTATGTGTTCCTTTTGGTTAACCAAAATAGTCTATATATCAGGACTGTCAAAATTAAGTGTTCTTGATTCAGTGCTCTTCCCCAGACTTGTATACAAATTACAAGATCTCACTACAGAACGTCTTTAACATAATTTTC-TGTTC-----GACTGTCTCAATGTGGTTCCAAAAAATGAACAGT-CTACAGAAGTGATAGACTACAGATCATTCCCCAGAACAGATCCACAAGTGAATTACTC .:.....x..:..x..x.::.x:....--------.:x.xx......:..x:x..:..x......-------..x::.x.:x.::.xxx:............x.--------:x.:..-----------:.....x:..x.x.:...:..::x...xx.x..:x:...xx.---:.::..x...:.:.x:::xx.::......x.......:....-..............:xx..x.x.::........::.:....x.......:.x........:...x......x....-.............:........:..............................................x..................................x...........:x...............x.....................x:x....................::x.x:...:::..:.:-..x.:.:::...:...-..:.:-----.....:::.--....x:...xxx.x.....:.:.-.:..x:.:x.:xx.::.....:::..x.::x...x::::....x....::.x:.x... 27M8I30M7I32M8D6M11D42M3I42M1D76M1I195M1I16M1D5M5D9M2I23M1D58M 409/561 72.9% 583/94230402 0.0% 49/561 8.7% 5913048 NA +3042 chr4 + 190214555 23320196 23320195 23320263 68 CTCCAGCCTGACTGCCTCTCAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAACTAAATTTCACTCAT chr4 - 94230402 31896460 31896459 31896526 62333877 62333876 62333943 67 CCCCAGCCCTCCC-CCCCCCAAAAAAAAGAAAAAAGAAACTCAAAAAAAGAAACTGAAGTCTGTTTAT .:......:xx.:-..:.:.........:......:...xx........:.....:..x.::::.:.. 13M1D54M 48/67 71.6% 67/94230402 0.0% 1/67 1.5% -8576264 -85654138 +3123 chr4 + 190214555 23320211 23320210 23320262 52 CTCTCAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAACTAAATTTCACTCA chr4 - 94230402 22746112 22746111 22746162 71484241 71484240 71484291 51 CTCTCAAAAAAAAAAAAAAAAAG-AACAACAAAAACAACCAGACTTCATTTA ......................:-.....x.....x...:.:.:....:.:. 23M1D28M 43/51 84.3% 51/94230402 0.0% 1/51 2.0% 574099 NA +9780 chr4 + 190214555 23322331 23322330 23322593 263 TTTTATTACAACAGACA--TTATTGTGATAACTTTTCCTACTTTATCGTTGCAATTTATTGAAGCAGTTAATTTCTCAAAAAGTAAGAACATTTTTTCTCATTAGAAATTCCTTCATGGCCTCTTTAATACATGTTCCTGGCTATTTGG------------------------AAGAACTGCTGATAAGTGATTT--TGACTTGTATCCTCAATAATGTGAGGTGTTTAAGGGAAACTTGGCAAACCACTTAGGGTCTGAAGCCATTTCTTAAAACCAGCCCCAACTGATT chr4 - 94230402 17406659 17406658 17406927 76823476 76823475 76823744 269 TCTAATTACAACAGACAAATTATTG-GATAACTTCTTCTGCTTTATCTTTGCAATTCACTGGAGCAGTTAATTTCTCCAAAAGCAGGCACTTCCTTTCTCATTAGAAATTCCTTTTTGGCCTTTTTAATTCAAGTTCATTATTATTAAACACACACTTTCACACGTACCCCCCAAATTTTGCTGATAAGGCATTCTATAACTGGTACCTAAGATAAAATGAGATGTTTAACAGAAAGTTT---------------------ACCACTTCTTGGAAGCAGTCTTAGCTGATT .:.x.............--......-........:.:..:.......x........:.:..:...............x.....:.:.x..x.::....................:x......:......x..x....x.x::....x::------------------------..:xx:..........xx...:--.:...x...:.:xx:....x:....:.......x:....x..x---------------------:...:.....::..x...:.::.:...... 17M2I6M1D123M24I22M2I43M21D30M 183/241 75.9% 269/94230402 0.0% 50/241 20.7% 5915672 NA +14781 chr4 + 190214555 23328661 23328660 23329158 498 AATTTTCAATTCTTTATTTTGCATGATTTTTCCCAAAGACTCCTGTGTTGCACTGTTGCACGAAGT------TATTATCACCAAAGCCAGGGCCCCATGTCTTACTAGCAGAACTGTATGATTCTTGACTCCATAATACTTGGAAGATGCATGCTTCACTGAAGTACCATTGATTTTCAACTAGAAGTGAAATGCTTTTATTTAATGCTTTCTTAAGAGAATTACCACGAAAGTTGAAGAGGGTTTGGCTTTAGAGAAATCCATT-------------------ATTGGGATTTATATATTGAAATTTAAATATAGGGGTCCCTTACATCTGCTCAATCAAAATGTTGTTCTAAAGCTATTTGTCTTTTCTATGAAATGGAAAG---CCTGTTTTGTCCTAGACTTCTAAATCCCTTGTTTTGCTCAAACAAGTCTTAGTATTTGCTCTCAG-GGAGTACTACCTCTTTGTTCAGCATAATGGGTG-----TAGCCTCAAATTTCACATCTCTGTACTGCTTTTTTTTTTTT chr4 - 94230402 17407640 17407639 17408143 76822260 76822259 76822763 504 AATTTTAAAGCTGTTAATT---GTAATTTTTTTCTAACATTTCTGC------------TACTAAATCAGCAGTATTACTTAGGAAGTCCTGGCTTCTTGGCTTAGCTGCAGAACTGCATGCCTCTCAGTTGCATAATATTTTGGAAATGTATGCTTCATTGAAGCATCATTGATTTTCAACTAAAGTGAAAATGCCCTCATTTAATGCTTTCTTAAGAGAATTACAAAGGAGGCTGGAGAGGGTTTG------GACAAAGTCATTATTAATTGTACATCACAAAATTGGGATTTATGTAT-----TTTTAATGCAGAAGTTCTTTACAGTTCCTAAATCAAAACACTGTTCTGAAATTA--TGTCTAATTTTATAAATGGAAAGATTCTATTTTTATTCAAGACTTTTAAATTCCTTTGCTTTCTTCAACAAACCCCTGTACTTGCTGTGAGAGGATTGCTGATTGCTTTGTCAGCAAGACCAATGATATTCAATCTTTGATTTCTGATTCATTTGCTTCTTCCTTCCCTTT ......x..x::x...x..---:.:......::.x..x.:.:...:------------:..x..:.------.....::xxx:...:.xx...::.x..x....x:x.........:...x:...::::.x.......:..x.:.:...:........:.....:.:................:.:xx:......::.:..........................x.x.:.:.:..:..........------..x...x:....-------------------............:...-----...x...::..::..:.:.....x:.x..x........:::......:..::..--.....xx.:.xxx..........---.:xx....:.:.x......:.....:....xx:..x..:x.....::.::x...:.....x.x..-...x.:..:x:.x:..xx......x:.:x::..-----:.::..:x:.....xx..::x.x.:..x...::..:::... 19M3D24M12D8M6I175M6D12M19I16M5D54M2D23M3I65M1I33M5I41M 323/470 68.7% 504/94230402 0.0% 62/470 13.2% 5921021 NA +3059 chr4 + 190214555 23341147 23341146 23341198 52 AAAAAAAAAAACCAAACAAACAAACAAAAAAAACAAATACCCTAACTATAAA chr4 - 94230402 81661612 81661611 81661663 12568740 12568739 12568791 52 AAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTTCCCAAAAA .......x...x.......................:.x:..:.xx.:.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -58320465 -35909937 +3117 chr4 + 190214555 23395625 23395624 23395659 35 TTTTCTAGGTTTTTTTGTTGTTGTTTTTTGTTTTT chr4 - 94230402 77238573 77238572 77238607 16991796 16991795 16991830 35 TTTTTTAGGTTTTTTTGTTGTTGTTTTTTGTTTTT ....:.............................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -53842948 -40387454 +3980 chr4 + 190214555 23395725 23395724 23395798 74 CTGCAACCTAGGACTCCCTGGTTCAAGTGATTCACCTGCCTCAGCCTCCCAAGTAGCTGGTAGTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:.:::..:.:x..........x.....xx.x........::...........x.x....x.:.... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 5198599 NA +3083 chr4 + 190214555 23398273 23398272 23398344 72 GCCACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCACTCTTTCTCTG chr4 - 94230402 17388726 17388725 17388797 76841606 76841605 76841677 72 GCAAAATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTCTCTG ..x.x...:..:..xx...........:......::::.:.:..::.:::.x...::....:x:x....... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 6009547 NA +3203 chr4 + 190214555 23420912 23420911 23420959 48 AATGCATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704279 19704278 19704326 74526077 74526076 74526124 48 AATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...:........::.....:.x.....:...x::.............. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 3716633 NA +3264 chr4 + 190214555 23425493 23425492 23425608 116 CTTTTTTGTTCTCTTTTTTCCTTTTCTTCTCTTCTTCTCTTCTTCTCTTTTTTTTCCTTTTCTTTTTTTTCCCCTTTTTTCTTTTTGAGGAATTTTCTTTCAATCTGAGGAAAGGT chr4 - 94230402 56151542 56151541 56151648 38078755 38078754 38078861 107 CTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCC--TTTTTCTTACTCACGAGCATACT-------TGAGGAAAGGT ...x.xx...:.:........x...::...x.xx:xx.:::...x:x..:...::......::...:......--........x:.x.x..::x.x..-------........... 73M2D23M7D11M 73/107 68.2% 107/94230402 0.0% 9/107 8.4% -32726049 -61504353 +3128 chr4 + 190214555 23439660 23439659 23439731 72 CTGCAACCTCCACTTCTGGGGTTCAGGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAAGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x:.::x.......:.::x...x.xx.x........::.............:....x.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 5242534 NA +3000 chr4 + 190214555 23445713 23445712 23445761 49 AAAATGGCTGCTATATAGCTGTATCTCCCTCTTTTTTTTTTTTTTTTAA chr4 - 94230402 28058656 28058655 28058704 66171699 66171698 66171747 49 AAAATTACTGCCTTATAGATTTCTCTCTCTTTTTTTTTTTTTTTTTTAA .....x:....:x.....x.x.x....:..:.................. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -4612943 -89617459 +8355 chr4 + 190214555 23456934 23456933 23457125 192 CAACCAGTGCCAACCATAAACCCCAGTTACAAAATTATATGATCTGCAAATCTCCCTAAACTCCTTTGGCTCCTAGTCCTAGAACAATACTGTGCTGTATGTAGTATTAATTGTTTCTGATGACAGGGATAATTTTAGAGAGCGCTTGGCTGGCTTCTCTGGTCTCCTTATTTGCACTTCTTTGTGACAAGT chr4 - 94230402 17432488 17432487 17432674 76797729 76797728 76797915 187 CAGTCAGTGCCAGTCATCAGCTCCAGCAACAAAACTACAGGACGTGCAAATCTTCCACAACTCCTCTGAGTTCTATTCATAGAAATATACTATGATCTACG-----CTTAGTGGTGCTGGTGCCAGTGATAATTTTAGAGGGAACTTGGCAGGTTTCCTCTGTCTCCTTTTTTGCACTATTTTGATACAGGT ..::........::...x.:.:....:x......:..:.x..:x.........:..xx.......:..:x.:...x..x.....xx.....:..x.x..:.-----:.x.x..x.x...:..x...x.............:.x:......x..:...:::x........x........x:....xx...:.. 101M5D86M 135/187 72.2% 187/94230402 0.0% 5/187 2.7% 6024446 NA +20762 chr4 + 190214555 23477210 23477209 23478033 824 TCCTCTTGTTGTCTTGGGTGGCCTTTTGC---ATAATGGTAAGCAATGTATCACTT---ATACACTCGAAACAGAAGTATATA-----------------------CTTTTTTAATATGCAAGTCTAATGGTTCCATTTGACGGAAGAAATCCCAGTGATCTATCTTGTCTCTCAAATTGATCCAACATATTGTGGCGTTCAG-GCCGAGTTACTTCCTGCT-AATAATTTCT-TAACAGAAAATGGAAAGACAATAGCATTAGTAAATCAAACC-AAATGTGTGATTAAATG-CTGCTTGAATATCAGGCATTTGTTTCAGTTCCACCAG-CCTGACTCCATTGCA----GCCCAGGCAGAGAAGGTCGTGTCATTTGCATGATACAGCAAGGTGCATTCTGCAAATCACCTTAAATTATCAACCGCTATGAGCAAACTGGTTGCTGGTATGTAACATTCATACATCAAAGGCAAACCTCCAGTGAGAATACACCTTGATTTCTCATTTAAGAGAGTACACTCCTTGTTGCCTTAGCAATACTTGCCTTTTCCC-AAATCCAATCACACTAG------TTTCAGGTTTTTCTAGATTTAGCCAT---------CCTGGCAAACTGGCAGCAAACTCATACTTAAAAACGTTTACATTTT-CTGTATCCATCTCAACACTAGAGACACTTTATATTGCCCATTTCCACAGAATTCTTGGCTTTAAAGCTGAGATTGTAA--ACATTCTAAACTACAGCTTTAAATCACATGAGATCTA---AGTTTTCTTTTGGTCTGTATTTCTGATCTCAGTTTGAACAATTGTTCTACCTTCTTTCAGTGTGCAGTTTTGATGACT--TGGGTCAGGGATGCATCTGAATTGCA chr4 - 94230402 17435098 17435097 17435966 76794437 76794436 76795305 869 TCCCCTTGTCCTCTTAATGGACTTTTTTTTTTACATGGGAAAGTAATATACCACTTTAGACATATTTGATAGGGCAGGACATGGGTTTGTTTGAGAGGAGAAGAGGATATTTTAATATGCAAGTCTAATGGTGTATTGGGTTTATAAGAATCAGGATGATCTATAATGTATCCTAAATTGAGACTACATATCATGGTATTCAGAAACATGTTGTGTCTTGTTAAATTTTTTCTGTAATACAGAAGAAGAACACAATAGCTTCAGTAAATCAAACTAAAATGAATGATTAAGTACCTGATTTAATACTGTGTATTAATTTCGGTTCAGATGGTCCTTGCTTTGTTGTATAATACAATTGCACACAAGACTACACCATTTGCATGCTATAGCAAGGTGCATTATAAAAATAATCTTAAATTACTAAGAACTGAAAGGGAA-TGATTGTTAGCATACAGTGCCCACATGTCAAAGACAAGCCTTTAGTGAGGGGACTCCTTGA-ATCTTATTTAAGAGCGTGTA--CATTGTTGCCTTAGCAATTCCTCCTTTTTCCTAAAATCCAATCACAGTAGCATCCCTTCAAGGTTTCTAGAGGCTTAGCCATTACTGCTCCTCCTGTAAACTGTCAGTAACCTCTTACTTAGCAAGTTTTAAGTTTTCCTGCATCTATCTCAAAACTACAGATGTACTGTATCACATCCTTCCGAAGAATTC--------AGAGCTAAAAGGGGAATTTCTTTCTAAATTACTGCTGTAAAGCACTGTAGATCTATCTGACTCTCTGTGGGGCCATGCT----GTCTTCATTTAAGTGATTATTCCACC-TCTCCAAGCTTGTAA-CTTGGTGGCTAGTTGCTCCTTGTTCCATCTGAAATCCA ...:.....:x....::xx.:.:....x:---.:.xx..x...:...:..:.....---.:.:.:.:..x.x:.x..x.:..:-----------------------x.x.......................x:xx.xx.x:x:x.::....xx::........xx...x..::.......xx.x......::...::.....-:x.:x...::x..:..:.-...xx.....-...:.x.:..x:::..x........x.:............:-.....x:.......:.:-...x..x....:::x.:...x:....:....x:x::.-...x:..:::...:.----:.xxxx...x.x...:::::::..........x..:.............x.:x....x.:.........::..xx:..:x:..x:..-..:...:.:.:..::.:::::..:.::......:...:...::......::x..x......-x...:.........x..::.--.x................x.:.x.:......:-.............x...------..:x......:.xx..::........---------:.:x.:......x...:..x...x......:x..xx....x:....-...:...:.......x....x...:::x:.:...::.x:x:....:x.......--------.:....:.:.xx.x..--x.x.......:...x...x....x...xxx.......---:::.:...x.x..x.::.::.----:...:x:...:.:::...:...:...-...::x..:x..:.:-:...:..:..--.x.x..xxx.x.x........x.x.. 29M3I24M3I24M23I97M1I18M1I10M1I41M1I17M1I37M1I15M4I87M1D61M1D20M2D32M1I17M6I26M9I46M1I54M8D16M2I37M3I21M4D26M1D15M1D10M2I26M 540/806 67.0% 869/94230402 0.0% 81/806 10.0% 6042112 NA +9852 chr4 + 190214555 23495573 23495572 23495847 275 AGAAAGCAAGTCAGGTGGTCTTTAAACAACACTCCCCTGAGACAATCAAGGTGGAAATAAACAAATCTCAAAAGTTTAGCGAGTAGATGTTTATCTTGCTAGATAGTTTTCTGT----AGCTACTTTTTAAAGCTAGCTAATGTTTAATTTGAGTAACCTTGTGGAAAGACCTGTTTAAATGGCACTATCAAACAATAGCAGCAAGAGGAGAGATAAGAAGAAA-GTAAAAAAGGATTATTAA--AGAAATGCTGGGGGTGAAATTTATCTCTTCAAACAAA chr4 - 94230402 17442563 17442562 17442841 76787562 76787561 76787840 279 AGGAAATGGGTCACAAAGTCCTCAAATAACATTGTCTTAAAACAATGAAAATGGAAAAGAAGAAATTTGAGACAACCAAAGTCTGGAAGCTTATCTTGATAGATATACTACTGTTACTAGCTACATATTAA-GCCAGCTAATGTTTAATTTCACTAACCTTGAGTAAAGGCCCGTGAAAGAGGTACAATCAGACAATAGACGCAAAAGAAGAGATAAGGAAAAACGTAAAAA--GATTATCAAGGAGGAGGGCTAGTAGGGGATTTTGTCTGCTAAAAAAAA ..:..::::....x:x:...:.:...:....:.x:.:.:.:.....x..::......x:..x....:.x.:.x:x::.:x.xx.:..x.:........x......xx:.x....----......x.x....-..:................x.x........x.x....:..:..xx..:x..:..x....:.......xx....:..:.........:.:...-.......--......:..--..:.:x...:.x:.x.:.x...:...x:.x...x... 114M4I13M1D92M1I7M2D9M2I37M 191/272 70.2% 279/94230402 0.0% 10/272 3.7% 6053010 NA +11492 chr4 + 190214555 23502507 23502506 23502815 309 TTTATGCCCCAAGGTGTAAGGGTACCAAATAAAGCAGTTTTCCAGATCTTATCAGTAGACCCAAAAGTAGAAATTAACTAGTAGTAAAAATCACTTATATTAAACCCCTTT--CATTTGCATATATTTGCATATGAATACC----TAATTGTTTTGAAGTAACAA----GAGAACAATGGAGGAAAAAAAGGGGGCTTGAGGCTGCAACAGACACCTGGGAGACTGTATTTTAAAAGTCTATATTTTTACATATTTGATTTTATTTCTTAAATAAAGAGAAAGGTACTGAGTCATGCA--CACAAAGT--ACTACCAAAAGAA chr4 - 94230402 17446033 17446032 17446338 76784065 76784064 76784370 306 TTTATGGCCCAGG----AAAAATACATTGTTAAGCAATTTTGTTGTTTCTACCAGCAGACCTTGAAGTGGAAATTAACGAGTGGTGGTATTCTCTCACACCCAATCCCCTGTACATTTGCATTCATTTGCATATGAATGCCCAGCTAATTGTTTTGAAGTAACAATTAAGAGAACAATAGAGGAAAGAAAAGGGACTCCAGGCAGCAACTGACACCTGGGAGTCTGTATTAAGAAAAGC-----TTTTACATATTTGA--------ATTAAAAATAGACAATGGAACAGAAACAGGCAGGCATAAAATTCATTACAGAGAGAA ......x....:.----..:::...xxx:.x.....:....x:x.x.::..:...:.....:x:....:.........x...:..::x.x..x..:.:.::x..:...:.x--.........x:..............:..----....................----.........:.......:...:...:..:x....x.....x............x.......xx:...:x.-----..............--------x.....x.x...x..x..x..x..:x..x...--..:...:.--.:...x:.:.... 13M4D94M2I28M4I20M4I70M5D14M8D32M2I8M2I13M 221/292 75.7% 306/94230402 0.0% 31/292 10.6% 6056474 NA +11546 chr4 + 190214555 23522183 23522182 23522420 238 ACTTTTTTGATTTTCCTATTCTTTTCAGGTAGTTCTCATAC--TAAACAGAATCTTATAGATGTAAAAATGAAGACCTCTGTAACAAATGATTT---TTTTTCTATTAAGTTTTCTGAAGGCTAGACAATCAACATCTACAAATCACACTGATGTGTCGTAGTATTAAATGAATTGTATTATATTAGAACATTAGTGAATACTGAA--AAATTTGTTCAATACTCTTGATATAAAATTTACCTCT chr4 - 94230402 17447933 17447932 17448176 76782227 76782226 76782470 244 ACTTTTCCTGTTTTTCTATTCTTTTCATGTACTTCTAATACATTAAATAGAATGTTATGGATTGAAAAATAAAAGTCTCTGTTATGGATGAATTATTTTTTTCCATCAAGTTGTCTGAAGGTTAGACAGTCAACACCTACAAATTACGCAGATGTGTCATATTCCTAAATGAATTGTATTATGCTGGCACACCTATGAATTCTAAAACAGATCTG-TCACAAATCTCAGTATAAAATGCACCCCT ......::x:....:............x...x....x....--....:.....x....:...xx......:..:::......x.:::....x..---......:..:.....x........:......:......:........:..:.x........:..x.x:.................::.:.x...::x:.....x..:..--.:..:..-...xx.x...:::........x:...:.. 41M2I51M3I109M2I7M1D29M 181/237 76.4% 244/94230402 0.0% 8/237 3.4% 6074250 NA +12136 chr4 + 190214555 23538847 23538846 23539258 412 CAGAGGTTATTCCACAGCATTTAGAGAAGAAGCAAAATAGTACATGGTT------CTGAATGCATTCTAAAAATGTTTGATTGGAGCACCTGTTAATTCTTTG-TCTTTAATTTTGCATATAGATACCATGTTTGGTGCCAAAGCAACTCAAAGTTTTATTTT----TGTGTTA----GGGAATCAATATTAGTGACTGAATGGGACAAGTTCATCTATCTATGCAATATTAAAATGTGACTGATGTGGTAAAACTACATCTAGTTGGCAGG-AACAGAGATATTTGATAGCAGAATAACTGGGATATTGCCAAATAATTTTTTTCCCTCCTCTCCCTCAGTGACATCTGGATCAGAACCAACGTAAGAACTATCACAT-TTCTGGAATGTTCTGAGGTCT-CCTTTCTGAGAGTTGCTGCTACTCTCTT chr4 - 94230402 17450163 17450162 17450586 76779817 76779816 76780240 424 CAGAGGTCACTTCGTAGCACGGAGAGGACAAACATAATGAAGTGTGGTCAAATCGTAGAACCCACCCTGAAGGGCTTCGATTAGGGCACCTGCTAATTCCTTAATCTTTAATTGTGCATGTGTAAGGTGTTTTCTCTGCCAAGACAATTCAAAGTTGCATTTTCTTCTGTGTGAATGTGTGAATCGATATTAGTGATTGAATAAGACAAGCTCATCTGTTCACTCTGTCTTGAAACATGACTTATGTGGTGAGACTACATCTAGTGGGAAGGCAACTGAAAT-TCTTATAGCCAAATGAGTGAGAGCTTGCCAAACAGGTTTT----CTGATCTGTAACAAAAGCATCTGGACAAGTGTTAGTGCTAAAATTGTCATTTAGTTTGGGAT-CAAAGAGGTCTGCATTTACCATAGCTTCTGCTGTTTTGTT .......:.:.:.::....:xx....:.x..:..x...::x:::....:------:x...:x..::..:..::xx..:....:.:.......:......:..:-.........x.....:.:x.x:x::.x..:xx......::...:........x:.....----.....x.----.x.....:..........:.....::......:......:.::.:x.x:.x..:...::.....x.......:.:............x..x...-...x..:..-.:.x.....x:...:.x..:..xx........:.:x....----..xx...x:xx..:x::........:x..x:::.::.:x.:..:.:...:x.-x.:...:..-:xxx.......-.x...x:x.x..:.x.....::.:.x.. 49M6I48M1I59M4I7M4I94M1I9M1D40M4D52M1I9M1D11M1I28M 272/406 67.0% 424/94230402 0.0% 24/406 5.9% 6088684 NA +3646 chr4 + 190214555 23539772 23539771 23539872 101 TGGCATGATGTTGGCTTGTTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCTGAGATTACAGATGTGCGCAACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ......x.....------:.:..:..:xx.x..:.::........:.x...x..x.x........::.:........::.:...--.:....:.x..::.. 12M6D66M2D15M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 5342658 NA +3030 chr4 + 190214555 23542758 23542757 23542807 50 CTTCTTTAC---TAAAAATACAAAAAACAAACAAACAAACAAAAAAAAGAAAA chr4 - 94230402 81661597 81661596 81661649 12568754 12568753 12568806 53 CTTCTTTATCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAA ........:---......x.x.x.........................x.:.. 9M3I41M 44/50 88.0% 53/94230402 0.0% 3/50 6.0% -58118839 -36111563 +3007 chr4 + 190214555 23542760 23542759 23542828 69 TCTTTACTAAAAATACAAAAAACAAACAAACAAACAAAAAAAAGAAAACAAAAATTAGCCTGGAGTGGT chr4 - 94230402 48673472 48673471 48673540 45556863 45556862 45556931 69 TCTCTACCAGCAAAAAAAAAACCAAACAAACGAACAAAAAAAAACACATCAGCAGTAGTCTTGTGTGAT ...:...:.:x..x.x.....x.........:...........:x.x.:x.:x.x...:..x.x...:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -25130712 -69099690 +31963 chr4 + 190214555 23560729 23560728 23561287 559 AACACAAAACAAAATGGGAAACCATGATTTATCTTCTATTTGATAAAAA-CATCTGCAGAATAAAATGAGCCTCTTGTTGCCGGAATTGTCATCAATGATGACTTTGACAAAATGAGCAATACATAATTTGCTAGCTCCCTTGTGAAGCTGAAACAGATTGTCAAATAAAACACTGGAGGAGATGCATATGGGCTGAGTAGACTGGCTTTGAATAGGAACATGCGCAGGTGGAGGCTTAGTAGTGGCTGTAAGAAGGAGGACAGCCCTAATTTGGAGGGTCATTTGCATTTGAAAATGCTCCTTACTAAATTGTGA-GTATTCCCTACAGGAAAAGAGAATGCATTCTGCCAAAACTGCAGCTATTTTTGTTTCTTGGTAACTTGAATAAACCAGAAAACCCAAGGCAAAGTGGAGG--GGGTTGCACTCAAACCAACCATTTTTTAATGGTGGGCTTATAGAATACAAATCAGTAATATATGAAAAGGACACTTATGAAAATCAA---------------TTGCTTTATGGTTAAAAATGG-ATTTTTCATCAACACGAAGCATGGAAAGTGTACTAA chr4 - 94230402 17466333 17466332 17466911 76763492 76763491 76764070 579 aagaaagaaaAAGATTGAAAACCATGATTTATCTTCTATTTGAAAAAAAACATCTGCAGAACAAAATGAGCCTCTTGATGCCGGAATTGTCATCAATGATGACTTTGACAAAATGAGCAATACATAATTTGCTAGCTCCCTTGCGAAGCTGAAACAGATTGTCGAATAAAATACTGGAGGAGATGCATATGGGGTGAGTAGACCAGCTTTGAATATGAACACATGCAGGTGGTCGTTTAGTAGTGGTTCTAAGAGGCAGGACATCCCTAATTTGGAGGGTCATTTGCATTTGGAAATGCTCACTGCTAAATAGTAATGTATTCCCTATAGTAAAGCAGGACTGATACTGCCAAAACTATAGCTATTTCTGTTCCAGGGTAAGTTGAACAAACCAGACAGCCCAAGGCAAAGTAGAGAGTGGTTTACACTCCAACAAACCTGCCATTAGTAGTGGGTTTGCAGAATACAGATTAGCAAGATTTCAGAAAATGCTCTCTAAAAAACAGAAAAACAGAACTTCTTCACTCTCTGGTAAAAAATGATGTATTTCTTGCAAGGCAGGCATAGCATCTGTATTGA ..x.x.:..x..:..x.:.........................x.....-...........:...............x.................................................................:...................:.......:.....................x.........::..........x.....:::........xx.:..........:.x.....:.x......x............................:........x:.:......x..:.-..........:..x...:x..:.:xx..x...........::........:....:.xx.....x.....:........x.:.............:...:--..x..:.....x...x....xx::x...:.:.....:..::........:..:..:..x..x.x.:..::xxx::.x.:....x..:---------------.::..:.x....x.......:-:.x....x.xx.x:xx.:....:.x.xx....:.:. 49M1I266M1I100M2I87M15I21M1I36M 450/559 80.5% 579/94230402 0.0% 20/559 3.6% 6094396 NA +17301 chr4 + 190214555 23577446 23577445 23578379 934 ACGAAGTGAAACCTGGTGCTTCCTGACAATAAATGTTTAATCCTCTTTCCTTGGAGATTTCAGGAAACTCCAGTAATTGAGGAAACAAGAATATGTAACCCTGGAGTACAACTTTTTATGAACACTGTGTAGTTCATGACACACAAGGGATCTTTTAAAAGCAG-ACGTTGGTGTTCAGTAAGTTTACC-CATTGACAAATGATTGTTTTACTGTATACAATACTCCCTACAAAACTTTTACTACTAT-TACACAAAAGAGTAATAAAAT----GAGAAACACCTTTTCCCCTCTATTTATACATCTCGCTCATCTCTGTAACTAAGTTTAATGTTTACCGGAGAGAGGGAAAAATATAATTCCTAGGGAACCCTGTG----------CTGTGCTAATGAAATGAGCAATAGGGCACCCTAAGGAGTA------------------GTGATTGGCCTCCCACGAAATGATCTAAACGTTGTCTTTGCAGCACCACACCCAACACACCCCGTATTCTGCCAGTCCA-CAGTTAGAGAGCCAGGGACAATGACCCTTCCA------------AAAAATGTTTT-----ATCTAAGCTTAATAAC----------------------AAAATC--------TCTCCATAAAGATAAACAAAT--------ATTTCCCAATTAATTAT-----TGACA---------TTTTCTGTACCA------TCCTATTGGGAAAATGTTCAATATGAATGCAGAAATTTACAAGCACCCCTTCTATCCCCTTTCCATCCCTACACTGTGTG------CCTAAAGAGAAATGGT-----------------------------------CCTGGGGATGATATTATGTGGAAATCACAATGCACCCCATTGATTACTCTCTCTAAGGAAGAGAGATGTGACACATTTTACAGAATCAGCCCAAAAGACAGAAAATCCAAAGCACTCATTATAT-ATTTTCGTCTGACGCAGCACATTAAAATTTGAAGAAAGAAAACCATCTTATCATAAAGTCAGCAAAAAAATAAAACAAAACGAAGCTCCTAT-TTATCTGCACAC chr4 - 94230402 17468095 17468094 17469147 76761256 76761255 76762308 1053 ACAAAGTACAGTGTAGTGTGTCTTGACACTGAGTGTTTAATAACCCATCCTTAGAGAC----AGTAACTACAGTAATTGAAGAAGGAAGAATATCTGACTCTTGAGTACGAGTTTTTATGAACACTATATAGTTCATGGCACACTAGGGATCTTTTAAATGCAGAACATTGGTGTACAGTAAGTTTACCTCTTTGACAAATGATTATTTTACCACATAC----TCAGTTAGGAAACTTTTACTACTGCAGATGAACAAAGACAATAAAGCCACAGAGAATTCTCATTTCTCTTT--TTCATGCTTCCC-CTTGTCT-TGGATCTATTCTCCATGTTGTCTTTCAAGTGGAAAAAAAAAG----CTCAGGACTAGTGTGAGTTAGTCCACCTTGCCAAGAACAGGATCATCAGGTTTTCTTCGGTATTACAATTAAATCTTTGCTTTATGAACACCTGCCTCTCTATTGACCTGCACGCTGAATTGGAAGCA-TGCACT--------------TTTTAACAGTAAATTAACTGAAGAGTTAACTAACACGACCCTACAACTCCTGCCTATGAGAAAGGTTTTAGCTCATCGAAGCCAAGTAACTGTTAAACCATTTATTGCTGTAAAGATCCATGCATGCCTCTGTAAAGCTAGGTAAATGCTAGAAGAATGCCCAAATCTTTACCTCGGTGAAAAACAGAAACCTGAATACATCAAAGAGGTCATATGCAGAAAGGGaaaaaaaaaaaaaaaaaaaaaaaaaaGAGGATCATCAGTACTACTT-AAGCTTTGCACAGTATAGTCTCTTTTAAAGCCAAATGATTCACAAGGCTATACATACACAACTAAAAAAAGTTCTCTGAAGAATATCTCATATGGAAGTCATAGTACACTCCATTAATTACCTTCTCTGAGGGAAAGAAGGGTGAAATCTGCTATAGAATCAGATCACAAGACAGAAAGTCCCAGGCATCCATTATGTAATTTACTCCTGACATAGCACATTAAAATCTGAGAAAGGAAGACCATTTTACTGTTAGGTCAGC---AAAATGCCACAGAACTAAAACCTGATGCTGCCTGCATAC ..:....:x.::x.:...:x..:.....x.:.:........xx:.:x.....:....:----:.x....x..........:...:x........x.:..:..x......:.x..............:.:.........:.....x..............x....-..:.......x.............-.x.............:......:::....----::xx:..x:..............::-x.::x.x..::::......::----.....x:x:.x....:.:.:--..:..:.x..:.-..::...-..x.x...xx:.:x.....xx.:xxx:..x..:.....x.x:----..x:...x:xx....----------.:x...:..x:.x.x..x..x:...x:x:.:.x:.x.x..------------------:...x::x.:x..:x:xx.x...:..:x...:..xx..x.x....-::...:--------------..:.:x....xx.-:.::.::....::.:xx.xx.:......x.x.------------.:...x.....-----...x....:x.:....----------------------..:...--------:...::.....x..:::....--------.x.x.....x.xx...:-----...x.---------:.xxx.::.:..------..x...xx:....:x.xxx..x.x:..x:x.:...xxx.x...x:xx:.x..x:.x.:x:..-x.x.::.:...x..:.:------::.....xx.....:.-----------------------------------:...::..xx..x.:..:.....:...:.:.:...:.....:.....::.....:...:.:...::x....x.:x.x:..:........x:..x..........:...x.:...::......:.-....x.x:.....::.............:...::..:...:.....:...:::.x.:......---.....:xx...:...x..:x:.:x..-:.::.....:.. 58M4D102M1I24M1I29M4D25M1I21M4I20M2D12M1D7M1D42M4D15M10I40M18I45M1D6M14D13M1I32M12I11M5I16M22I6M8I21M8I17M5I5M9I12M6I62M1D17M6I16M35I124M1I63M3D26M1I12M 593/899 66.0% 1053/94230402 0.0% 189/899 21.0% 6109351 NA +3946 chr4 + 190214555 23582033 23582032 23582164 132 CCATGGCACCATTCATCAAGGGATCTCAGAGAACTTTACCTGAGTTAATTAATACTGGCAACGCCTCTGTGAACTAGATAAGTGTTATTATTCCCATTTTACAGATGAGGAGACTGA-GTAATGGAGAAATTA chr4 - 94230402 80987786 80987785 80987909 13242494 13242493 13242617 124 CTATAGCGCCTTTAATTTGAAGATCTGAAAGTGCTTGTAAAGAATGAACTAA---------CCCCCCTGCGAGGTAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTA .:..:..:..x..x..:x:::.....x.:..x:...xxxxx..:.x..:...---------.x..:...:..:x...:.....:x..x...:..:............:...:.....-.:.x.:....:::.. 52M9D56M1I15M 82/123 66.7% 124/94230402 0.0% 10/123 8.1% -57405753 -36824649 +3002 chr4 + 190214555 23585413 23585412 23585460 48 TGTGTTTTTTTGTTGTTGTTGTTGTTGTTGCTGCTTTGGTTTTGTGTT chr4 - 94230402 59743379 59743378 59743426 34486977 34486976 34487024 48 TGTGGTTTTTTTTTTTTGCTGTTGTTGTTGCTGCTGTTGCTTTGTTTT ....x......x..x...:................x.x.:.....x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -36157966 -58072436 +3372 chr4 + 190214555 23602541 23602540 23602647 107 AGAAGAAAGGAAAGGAA-AGGAAGAAGGAAGAAGGAAGGAGAAAGAGAGAGGGAAGGAAGGAAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAAAG chr4 - 94230402 55334390 55334389 55334495 38895908 38895907 38896013 106 AGAAGATGGATAAGGAGTAACCAGAAG--AGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGG ......x:.:x.....:-.:xx.....--..:...:..:..x..x.x.x.:............:.x.x....:.:..:..::..:x::..x.x..::....::.:.:. 17M1I9M2D79M 69/105 65.7% 106/94230402 0.0% 3/105 2.9% -31731849 -62498553 +3067 chr4 + 190214555 23602584 23602583 23602637 54 GAGAGAGGGAAGGAAGGAAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAGAAAG chr4 - 94230402 69066686 69066685 69066736 25163667 25163666 25163717 51 GGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACG---GGAAGAAAAGGGAG .:............::...............x:..x.---.....:....::.. 37M3D14M 42/51 82.4% 51/94230402 0.0% 3/51 5.9% -45464102 -48766300 +3540 chr4 + 190214555 23638501 23638500 23638643 143 ATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACCATATATATACCACATATATATACATCATATAAATATATAAATATAAATATATATACATCATATAAA chr4 - 94230402 8395796 8395795 8395930 85834473 85834472 85834607 135 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACAT-----TCTGGCAAATAAG---GTAGGTATTAATAAAGCTGTATCACAGAAA ..:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.::x.:.xx.x.:x:.x..:....-----.x::x..x....:---:..::...x....x.xx.::....:.x... 92M5D13M3D30M 86/135 63.7% 135/94230402 0.0% 8/135 5.9% 15242705 NA +3719 chr4 + 190214555 23638502 23638501 23638571 70 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x..... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 15242709 NA +3324 chr4 + 190214555 23638526 23638525 23638682 157 TATATATATATATATATATATATACACACACACACACACACACACACACACCATATATAT-----ACCACATATATA---TACATCATATAAA----TATATAAATATAAATATATATACATCATATAAATATGTGTGTATATATGTACCACAATATCTTTATCCACTC chr4 - 94230402 88147180 88147179 88147343 6083060 6083059 6083223 164 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTACATCAGAAAGAATACCAAGTGAACTTTAACACATACACA--AGAACAATTTCTGTTCTCATA---ACCACAGCACATTCATACAATC ..:..:..x:x.............:::x:::::.::.:.....................x-----.x..:....xx.---.......x.x.:.----:.x:.:..:x.x..:.:...:...--.x.xx...x.x...x:x:...---......::.:x..:..x..x.. 60M5I12M3I13M4I24M2D21M3D22M 101/152 66.4% 164/94230402 0.0% 17/152 11.2% -64508654 -29721748 +3103 chr4 + 190214555 23652968 23652967 23653019 52 AGTCAGGTTTGTTATATATATATGTGTGTATATATATGTATATATATGTGTA chr4 - 94230402 85036766 85036765 85036817 9193586 9193585 9193637 52 AATCAGGTTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTA .:........:.xx:....:.:...............:......x:.x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -61383798 -32846604 +3022 chr4 + 190214555 23659312 23659311 23659353 42 CAATTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 24368498 24368497 24368539 69861864 69861863 69861905 42 CAGTTCCCTTTCTTTCCTTTTTTTTTTTTTCTCCTTTTGAGA ..:..:.:.......:..............:.::........ 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -709186 -93521216 +12139 chr4 + 190214555 23685647 23685646 23685901 255 CTCCTCCCACTCAGACCATGAAGTCCTTTCAGATTTCAGCAGCATTACTCATCTTGATTATGCCACCAGTCTCTTTGATGGGAGGCTCACCTGCTTCCTTTAAGAATAAGGATGCGATTTAAGGTTTAACTTCCAACATTTAAGGCACTTAAGGTGCCAGGTCCAATTTATTTACAGCTTCTGATCGATGAGTACTTTCTGTATGGAGCATGCACTTCGGGCCAGGATTACTTCCCTCCAGTTCCCTCACACATC chr4 - 94230402 17482258 17482257 17482508 76747895 76747894 76748145 251 CTCCTTACACTCAGATTCTGCACTCTGTTCAAGATTCAGCAGTGTTACTCATTTTGATTATGTCACCCATTTGTTCAGTAAGTCATTTACCACCTTCCTTTAAGAATCAGGACACCATTTCAGGTTTAACTTCCAACATTTAAGGCACTTAAGGTGCCAGGTCCAATTTACTTACAGCTACTGATTGATGTCTACTTTCTCCCTTGA-CTTGAA--TCAGCTTTGGATTGCTCCTCGTCTATTCCTACA-ACATC .....:x........::x..x.x..:x....::x........::........:.........:....x:.:.x..:::.::.xx::.:...xx..............x....::.x....x.................................................:........x.....:....xx........x:x.x..-.x..x.--..:.x::x.....:..:.:.x:.x:....:x..-..... 207M1D6M2D33M1D5M 189/251 75.3% 251/94230402 0.0% 4/251 1.6% 6203389 NA +3149 chr4 + 190214555 23709185 23709184 23709259 75 CTATATGGAGCATTATTGTATTGTAAAGGGTTCCTTTAATTCCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTC chr4 - 94230402 20989792 20989791 20989866 73240537 73240536 73240611 75 CCATACGTTGAATTATTTTCTTGTATAGCCTACATGAAATTGCTACCTCTCTCTCTCTCTTTTCTTTTTTTCTCC .:...:.xx.x......x.x.....x..xx.x.x.xx....x..x:............:....:.......:.:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 2719393 NA +3186 chr4 + 190214555 23709222 23709221 23709258 37 AATTCCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 18929910 18929909 18929946 75300457 75300456 75300493 37 AATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT ....:..:............................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 4779312 NA +3164 chr4 + 190214555 23709227 23709226 23709279 53 CTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTCTTTGTTTTGTTTTTGAAACA chr4 - 94230402 56917972 56917971 56918024 37312379 37312378 37312431 53 CTTTTTTTTCTTCTCTTTCTCCTTATTTTTTCATTTGTTTTGGTTTTGAAACA ....:.:.:::.......:.::..x......:x.........x.......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -33208745 -61021657 +3008 chr4 + 190214555 23709228 23709227 23709271 44 TTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTCTTTGTTTTGTTT chr4 - 94230402 18929914 18929913 18929957 75300446 75300445 75300489 44 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTT .:.............:...............:..x..::::... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 4779314 NA +11968 chr4 + 190214555 23734102 23734101 23734717 616 CATGTGGAAAAGAGAGGAAGATAGCCATAACTTCATGCCAGTAAAATATAATGACTAAACAATTTCAAGAAAATCACAAGAACCCAGGCAGCCAGG-----------CCTTT----CAGTTTTAAATGACTATGAACTCATTTAAGCATTTGTTCACAGAGGGCCA-AAAGTCTATGATGGATCATGCAAGTCAGAGCTAAGTAATGGTTCACCATGGTCTGGTTAATAGTTAGACAAGCTGTTCACGTTTGA---TTAGGGTTTTCTTTTCCATTGCTATAATTGTATGATAATTAACTCAACAGACTTACATCTCATTTGGGG---------GAAATATGTACATTTTGAAGTTTCAGGATTAACAGACTCCACATGTCAAGAAAAAGTCTGAAATCACACTGTAGTTC--TCCCACACAGCCATAAA-GATCGGACCACAAGGTGTGTGTCTTGTGAGTTTCTGTCTCTAAAGAAGCTGGTGAGTTTCCTTAGCTCCGACTTCTTTCAAAGGCTCTATGCACAAAAGTGCTCTATCCAGACATCTGTTGATAGATTAGAATTGCCAAGTGGCAAAGAGAATGAACATCGAATG-------ACTCTGGAGCTCGACTTAAGATGGA-GCACATGAGGCTTTCCTAAAAGAAAA chr4 - 94230402 17499334 17499333 17499933 76730470 76730469 76731069 600 CAGGGAGAGGGAGGAGGGAGTTAGC-ATAACTTCATACCAGTTAAAAATAAC----------------------CGCAGAGACTAAGACTGCTTGGTTGAGTGATGCCATTTACCACAGCTTTAAATTACTGTGGAATTGTTTAAGCATTAGTTATCTGACTGCCATGAATCCCATGATGGATCTCTTAAGTCAGAGTTAAGTAATGGTTTACCGTAGCTTGGTTAATGGTTATACAAACTGTTCATGTTTGATTGTTGTGTTTTTTTTTTCCATTGCTGTAATTGTATAATAATTAAGTCCTCTAATTC---TCTTTTTTAAAATTAGTTTTTAAAATCTACATATTTTGCAATTTTAGGATTAGCAATATTTTTTTTTCTGGGAAAAAC----AGTTATATTACAGAGCATTCCACCACGTCAATCAATTAGTGGTTTCTGCAGGGTTTATATTCTCAATTTTTCAATCCAGAATAATGGGC-----------ACTTAAACT--TTCCACTAGTAGAAAGTACAACAGAAC---AGAGAGACAGCACTTGATTGATTGGAATTGCCAAGCAGC------AATGAACATTTAATGCAATATAGCAGTGAATGCTAACTTAAAAGAGAGGAACATAA---CTCCTTGAAAGAAAA ..x.x:..:::::....:..x....-..........:.....x...x....:----------------------.:..:::..:x..:.x..:x..-----------.x...----...:.......x...:..:.x.::..........x...xx.x..xx....-:..x:.:..........x:x:.........:............:...:.:.::........:....x....:.......:......---..:x.x....:............:.........:........x..xx.x:.:.:---...:x...::::---------:....x.::.:......x.:...:.......:..:xx.::x:x.x..x:.:....::----.:.:.:.:.::..xx.--...xx...:x.x..x..-x.x:..x::x::x:.x..x.:.x..x.x.:...:.xxx..:.:.:x.::x..:-----------:..:x:...--..:..xx:.:xxx.x.:....x..x:.---.xxx.....x.xx.....x....:...........::..------.........:x....-------:.xx..:.xx:::......:.x:..-.x....:.---:.:.:.:........ 25M1D26M22D22M11I5M4I50M1I86M3I54M3D12M9I57M4D16M2I17M1I53M11D9M2D27M3D39M6D15M7I25M1I8M3D15M 372/561 66.3% 600/94230402 0.0% 94/561 16.8% 6234768 NA +3022 chr4 + 190214555 23748207 23748206 23748249 43 TATATATATACACACACACACACACACACTCGTAGATAATGTA chr4 - 94230402 21704674 21704673 21704716 72525687 72525686 72525729 43 TATATATATGTACACACACACACACACACGTGTATAAAATGTA .........::..................x:...x.x...... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 2043533 NA +3022 chr4 + 190214555 23748207 23748206 23748249 43 TATATATATACACACACACACACACACACTCGTAGATAATGTA chr4 - 94230402 21701101 21701100 21701143 72529260 72529259 72529302 43 TATATATATGTACACACACACACACACACGTGTATAAAATGTA .........::..................x:...x.x...... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 2047106 NA +4232 chr4 + 190214555 23758319 23758318 23758497 179 AGAATAGATCATGAAACAACAACAATAAAAGTATCTTCCACAGGCAAGAAAAACCTGCTCT--TGATAGTCTGCTGAATAGTGACTGAGATGACTGGCAGTAAAATAGGAGACTTTTCAAGTGGATGAAAGTTAAATTCAATAGGTAGGAAATATAATTT-------GAAAAAGGAGCTTCTATTCAT chr4 - 94230402 17502709 17502708 17502892 76727511 76727510 76727694 184 AGGCTAGGACACAATGCAAAAATGA-AAAAGAGCATTCAGCA--TAGAGAAATTCTGTTGTGTTGGTTGGCTGCTGAATAGCTGCTTCAGAGATTGACAGAGCAAGATGGGGCTTTTAAATGGGACAAAGACTTAATTCAATAGAGAAGGAATATAATACAAAAAAAAAAAAAGGAG-TTCTATTCAT ..:x...:x..::.x:...x..::.-.....x::x...x:..--:.:::...x:...:.x.--..:.x.x...........:x:..xx::x..:..:...x:x..x.x.:.:.....x..xx...::..:::.x..........:x.:.:........x:-------:.........-.......... 25M1D16M2D17M2I97M7I10M1D10M 114/175 65.1% 184/94230402 0.0% 13/175 7.4% 6255610 NA +4294 chr4 + 190214555 23758319 23758318 23758497 179 AGAATAGATCATGAAACAACAACAATAAAAGTATCTTCCACAGGCAAGAAAAACCTGCTCT--TGATAGTCTGCTGAATAGTGACTGAGATGACTGGCAGTAAAATAGGAGACTTTTCAAGTGGATGAAAGTTAAATTCAATAGGTAGGAAATATAATTT---------GAAAAAGGAGCTTCTATTCAT chr4 - 94230402 17506137 17506136 17506322 76724081 76724080 76724266 186 AGGCTAGGACACAATGCAAAAATGA-AAAAGAGCATTCAGCA--TAGAGAAATTCTGTTGTGTTGGTTGGCTGCTGAATAGCTGCTTCAGAGATTGACAGAACAAGATGGGGCTTTTAAATGGGACAAAGACTTAATTCAATAGAGAAGGAATATAATACAAAAAAAAAAAAAAAGGAG-TTCTATTCAT ..:x...:x..::.x:...x..::.-.....x::x...x:..--:.:::...x:...:.x.--..:.x.x...........:x:..xx::x..:..:...x.x..x.x.:.:.....x..xx...::..:::.x..........:x.:.:........x:---------:.........-.......... 25M1D16M2D17M2I97M9I10M1D10M 115/175 65.7% 186/94230402 0.0% 15/175 8.6% 6252182 NA +3564 chr4 + 190214555 23772525 23772524 23772591 67 ATTACTATTATCTCCATTTTACAGATGAAGAAACTGAGGCTTAGAGGAGTTACA-AATTTGCCCAAAG chr4 - 94230402 10729193 10729192 10729260 83501143 83501142 83501210 68 ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG ........:.x.............:..:::..........x:.x.x::....x:-..........:.. 54M1I13M 52/67 77.6% 68/94230402 0.0% 1/67 1.5% 13043332 NA +14678 chr4 + 190214555 23772861 23772860 23773151 291 GGAACAAACTTGCTCAAGCTG-TGTTTACTGGGGAACTTGCTGTAACTGCT-TAGAACTCAATTGCATTCTGACACTCTATTCATCTTCCAGCTTATTTCCCATCACTGACCCTGATCTTATTAGAAAAACCTTGGAGAATATCAGTAATGGCA-----CCTTTTTATTTTTTGACAAGTTACTCCAGAATGTATTTAATATCTTAAAATTGTCATTGATTGAAACTAGTAATTTTAAATGAGCAGTTTCAAACTAATATTTCTCTTTTTTTTTTCCTTAATATTTTTTTCTCCCTAG chr4 - 94230402 17510104 17510103 17510393 76720010 76720009 76720299 290 GAGACAAAGTTTCATGAGTTTCTGTTTTTCTGGTAACTTAAGATAACTCTTCTGGAACTCAATTTAATTTTGACATCCTATTCATCTTCCTGCTTATTTCCCATCACTGACCCCGATCTTATTAAAAAAACTCTG-AGAATGTCAGCAACTGCAGTGTTTCTTTTTTATTTTTGACAAGTTACTCCAGAATGTGTCTAATGCTTTAAAATTGTCATTGATTGAAAACAGCAATTCTAAATGAGCGATTGAAAACTAATTTCCCTCTATTTTTT-------ATTTCTGTTTCTCCCCAG .::.....x..x.x::..:.x-.....x::x..x.....:xx:.....x:.-.:..........xx...:.....::.............x......................:..........:......::..-.....:....:..:x...-----:......xx.........................:.:....:::......................x:..:....:.........::..xx........x.::....x......-------..x.:.x........:.. 21M1I29M1I83M1D18M5I114M7D18M 224/283 79.2% 290/94230402 0.0% 15/283 5.3% 6262757 NA +29209 chr4 + 190214555 23782508 23782507 23783313 806 CATAAACCAAATTCTAGCCAGATTCTCCCGGAATAAAATACTACAGTTCATCCATTAAGCTAAATCTCCTTTCAACAATTCCCTTCTTACCTGGCCCATGAAATGAATAATGAAGAGATTATTTTCTGGGCAAATTGGTAGAAAAATCCTGATGCAGACAGTTCCCCT-TCTGATTGCA-CCTGACTTCCATTCATTGACTATCACATCAAGTAGTGGTTCTGGGAATTCAAAGGAGAGCTCAGCAAAAGAAGAAGAAAAAAAAGCCCACAAAGTTTTTCAAGGTACCTACTGCA--GTTATCAGTTCATAGATCTAAATGTTCGCACTGTATGCTTGATTTGCACATTCCAAACCAATTTGGTAATTTTTTTCATTTTTATCTACACGCATGAAGTGATTTGGAATACTGAAACAATTTAGAATCATATTTCGTTTGCAACAGTTCAATTAACTTAAGTGCTGGAACATGCTCTCCAACTGGTAACTAGTTTAATTGGTTACTATTACAAGAAATAAATTCTATA------------GTCCTGGGGCCTCCCAGTGTCCTTTCTAGACAGGGCCCGGCCATGCAGAGGTATGTGGGAGTGGGAAGGTGAGGAGTGTAGCAAAATTT---------------------CTTACTTAAAAAAGAAAA-----ATC-----CAAGAACCCATTCTCTTAATAACTAGGTATGAGTTTCCATTTTCTGCTGTGATTTTATGACCTCCAGTTCCCTTGGATCAACTTTACAACCACTCAATAAGCAAGAGAAGGGTGTGGATCAAGGGTCGAAGACTTTTAAAGCTATTGCATAAATGCACTTAAGCATGAGCCAAA chr4 - 94230402 17517212 17517211 17518005 76712398 76712397 76713191 794 CACAAATTGAACTCAAACCAAGGTCCTTAAGAATAAAGCACGGTGTTTTATACATTAAGTCATTCCTCCTTTC-------------TTACTTGGCCCGTGAAATGAATCAGGGAAAGATTATTTTCTGGGTAAATTGGTAGTAAAACCCTGATGCAGACAGTTCCACAATTTGATTGCAGCCTGACTTCCACTTATTGAATATCACATCAAGCAGTGGTTCAAGGGTTTCATATGACAGCCTT------------------AAAATCCACAAAGTTTTTAAAGGTACTTACTACATTGTGATCAGGTCACAGATCTAAATGTCAGTATTGTATGCCCGATTTGCACATTTCAAAACGATTTAGTAATTTTTTCA--TTTTATCTGCATGCATGAAGTGATTTGGAATACAGAAACAATTTGGAATCATATTTAGTTTGTAACAGTTCAATTAACTTAAGTGCTGAAACATGCTTCTTTCTTGGTAACTAGTTTAATTGGTTACTATTGCAAGAACACAGTTCAAAAGAATGCCTGAAGGGCCAGGGGCAAACTAAAGCCCACCCCAAAGAATCCATGCTCCTGCATAGGCATGT----GTGAAAACAAGAAGAG-GCAGCAACCTTTGCATCACGATATGGTGTATGACTGCCTTTGGAAGAAGGACACGTATCCTGAACGAGAAACAGACTGCACAACAAC-------GGCTTTTCTTTGGCTAGTG--------TAACCTCCAGTTCCCTTTGACTAATTTTATTACTGCTCAAGAAGCA--GGAATGGTAGAGCACAAGGTTAGAAAA-TCTTAATGGTGCTTTATACATTTA---AAGCTTGATCTGAA ..:...:::..:..x.:...::x..:::x:.......::..x:::x..:..x.......::.xx:........-------------....:......:..........x.x.:.:...............:..........x....:..................x.x-.:........-...........:.:.....x............:........x:..:x....x.x..x...::x------------------...::.............x.......:....:..--..x.....x...:............:x.:.:.......::............:....x.:....:..........:x--........:..:.....................x..........:...........x.....:.........................:........::::xx:...........................:......xxx.:...x.x.------------.x..x.....xxx.:.:x.:..x::.:.:.x.:xx.x:.x:.x....x...:....----...::..x:x..:...-.:.....xx...---------------------..xx...x::..::.::.-----...-----.:....x.x:x::x.x:..:...-------.:x...:.x..xx..:x..--------.:...............x..::..:....:x..::.....x.....--:...x...:x:.xx.....x.x...:.-.:....x.x.::.x:...x..x:.---....x...x.::.. 73M13D82M1I10M1I63M18D34M2I77M2D150M12I56M4D16M1D12M21I18M5I3M5I23M7D19M8D46M2D27M1D24M3D14M 555/747 74.3% 794/94230402 0.0% 106/747 14.2% 6265296 NA +6721 chr4 + 190214555 23788661 23788660 23789278 618 CATCACATGCCGTGTGACCAGTTTACTAACTTACCCTTCTCTAGGAAGCAGAGTAATTAATCATCATTCTGTGATAGTGTATA-CACATTCCTGCCAACAAATAGGGAAGTGCTTACAGAGGGCAATACTTCTAAGCACTATGAAACATTAGTCATACATCTGATTAAAGGGTATAGTGATC-AAGCCGAAAACCTAGTAGATGGTTAAACTAAGAACAAGCACGTCCTAATTTTCTTTTAAGAATTAAGTCAG------------------TCTTTCAAGCGCACTGTGAAGCTATGAGAGGAATAAGCAGGGGACCTGCTTGGAAATGAAGTGAGAAAGCAATGATGATACGAATGAAGACAGGACTTGATTTTCAGCAACACCAACGTCCATCAAAGGAAAGTACCTGTGAATTTCCTTAAATGACTT-GCTGGAGGGCATTTTGTGGTAACTATAATACTATAGCCACTTTTT---TTCATCAATTAGTATTGTTAAAGAGAAGCTTGACTATAGAGTTCCTAACA------GCAGCAAAAAATAAATTCCCTCCAATTAAGTAGTCTAATAAGCTATTTA-GGATTTTACCACTTA--ACATTCTTTCCTTCCCATTTAATTTTGGCTTTCACTTGGATGTCATCT chr4 - 94230402 17526566 17526565 17527192 76703211 76703210 76703837 627 CGTAACATGCTGTGTGACCAGTTTACAAAACCAGGCTCCTTCAGAAGGGCGAGTAATTAATCATTATTCAGCAGTAGCACTCAGCACTCTACTTCTTGCTGGCAGGAGTGTA-TTACTGAGGGC---ATGCCTAGCTGCTACAATACATTATTCATGCAACAG----AAAACTACAGTTGTCTGTGGCATTGCTACAATAAATGGTTAAAAGAAAACAAAAAACAGTCT-GTTAGTTTTCAAGCATGGGCCCGGTTTTGGGTATGTGTGTTTTTTTTTTAATTTACTGCCAACACATTGCATGAATAAGCATAGGCCTGAGTTACAAACGCTGTGGGAAAGAATTAGTGTAAGGCACCAAT------CTGCGTTTTTCATAATGCCAAAGTCAATAATCCGAGGACAGCGAAGGATCT-CTCGAATGCCTTCCCTTGAAGGTATAGCGCAGTAACTTTATGGCCGTAATAATTTTATTACTTTATCAAGCACTAATTTAATAGAGAA--TGAAATGCACATTGTCAAAAATAAAGTGTAGCAA-----ATATTTTATTTGATTAAG-AGTCCTAACAGTAATTTGCGTATTGTGCTCGTTAGGACATGGATTTCTTCGTGCTTACTTTAGGCTTTCATTTACACCACATCT .:.x......:...............x..x::.xx..:..::..:.:.xx..............:....x.:::...:::x:.-...x:.x..x.:x:.x:::...::x..:-....x......---.:x:...:x::...::.x......x....:..x.x.----..::x..:...x:..-:x.x.:xx:x:x:.:..:.........xx..:.xx..:x..:x:..-:..xx:...:...x..x::x:.:.------------------.:...:x.::x:....:x..xx:..x:x.x.........x:..x.:x:x..:x...:.xx...:.....x.x.::..xx.x.x.:x..x------..xx:....:x::..::....x...x..x.xxx..::::.x.x:x.:..:.-..::....x...-x..x..:..:..xx:.::......x..xx:.::..::x.:...x.---..:.....x:.x..x.x.x.x......--.x:.x.::.x.x.x:.x..x.------.:.....-----.x...::x.:::......-....:x.xx..:x....:-.x...x.:.:xx...--....xxx..:....x:::...x...x........:..:x.:xx..... 83M1I28M1D11M3D36M4D15M1I46M1D24M18I89M6D51M1D12M1I45M3I27M2D21M6I7M5D18M1D18M1I15M2I48M 353/594 59.4% 627/94230402 0.0% 57/594 9.6% 6262095 NA +15345 chr4 + 190214555 23790149 23790148 23790578 430 CATTTTGAGTGGAAGGGAGGAAGCATAACGTGAAGGTTATGTCTTACCATCCTTCCCCTACAAGAAAATCTTATTTTCCCTCTCACAGAAAATCTGTATTTCTTTTCCCCAACATGCTAACAGAGA--CCGGTGAACAGAAA---TAGGCTGCTTTGTGTCCATCAATAGAATCTATATACTATCTTTTCCCCCAGGGATTAATTCAGCTTTTGATTAAATCTTTCTGAGATTTAAATCATGATGTTACAAACCTCCAAGGAACTCCTCTATGAGTTGTGACCTTCTTTATTACTCTCTGCCGTTTGATAAAGTACA-AAGATTGATTTATAATGGATTGTAGTGTGTT--TGAAAACGGAGTAGCAACGAAAATTGCAAAATATAAGATTAATATAAATATTGCAAATGGAA--TGTTTTAGTTAAAATATTCTATAAC chr4 - 94230402 17528365 17528364 17528780 76701623 76701622 76702038 416 CAGTTTGAG-GAGAGCAAAGCGACAGGAAGTGCAGAGGATGTATCCACTTCCTCTTGCT----GAGGATTTCATTTTC--TTTGCTGAGAAGCCTGCTTTCCTTTGTCCCACTGTACGAACAAATATACCAGTTCCCAGAGAAGACAGGCTGCCCTGTGTCTATCAATAGAATCTATATAGAATCTTTTCCCTTAGGGATTAATTCAACTTTTGATTCAATCTTCCTGAGCTTTAAATTATGATGTTACAAACCTCCAAGGAACTACTGTACTATTTGTGACCTTCTTTATTACTTTCTGCTGTTTGATAAAGTAGAGAAAATTGATTTATAG-----TTTAGTTTGCTTGTGAATGTGGAATATGAATGGTGACAGC--------AGATTTATGAAAAAG----AGAGGGAAGTTGTATTGGTTAAAGTTTAATATAAC ..x......-.::..x:.:.x::..x:.x...x..:xx....x.:xx.x....:::x..----..::..:.:......--.:.xx::::..::...:x..:....x:....x::.:.x....:.x.--..:..xxx....:.---:.......::......:..................xx..........::.............:.........x......:.....x.......:..........................x..x..:x.x....................:.....:.............x.-..:...........:-----.x....x..:.--....x::...:..xx..:.:x:.:x..--------.....x..:x...x:----.:.x....--...x..:......:.x.xx...... 9M1D49M4D15M2D46M2I14M3I172M1I15M5D11M2I27M8D15M4D8M2I25M 300/406 73.9% 416/94230402 0.0% 34/406 8.4% 6261784 NA +185436 chr4 + 190214555 23791974 23791973 23795969 3996 GAGAAACATGCCAGGAGTTTGGTTACGATAAATAAGAAAAGCAGAAGTAGATTTGAAACATTCGTTTCCCTTTATTAGCTCAGTGAGGCTGATGTGTACTGCACATTTAAAAAAAA-----------TCACAGGAATTTTCATACAATGAATAAAACCACAACAATACATGTAGAATTGGCAGGTGGAAAAAAGGCCCGGCAAGGGCTCAACTAATCGCTCACTTTCCCTCTTCAGCATAGTTCAACCAACAGTATTACACTTTCACCTAC-----AAATCTTAAAGTAGCTCCATCAAATCAGCAGTTCACATTATTGAAAATGTCTGTCACATAGGTACAAATTTAGAATCATCACATTATAGTACATGGCTATTCTAGGTCATCTATAGATCAGGTCTTAGACTACAGTGATTGAAGTTCTCATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTAAAGGCATGAAAAGG---------------------TTTCCTTTTATCAACTGACCCAAACATCATACCCCAATAGTGCAAAGTTCCCTCTC--TGCTGCTTTGAATGTTGACAGCCCAACTGTTGTTCTCGGAGTCGTTTAGCAAAAA------------------------------ATTGATTTTGTTGCACT---------GGAAGAATTATTCTGCTACATCTCTTTTAAAAAAGAAAAAAATCCACATTACTAAAGCACCAGTTCGGTTACCAAAATTGTAGATGTGGTACTTACCACGGCATGAAGGCAATGGCCCACGGTCT---TCTAAAAATCCTACAGATCTATGCTGAAATTTGCCTCCAGTGATGATGGGGTGCACGTGTTCATTTGAAATATTCTCTCCCAAAAAAATAAAAATAAAAATGAGAGGAGCACAGCTTACATTTTGATGGGCTAC---CCACAGTGTCTGCAGAAGATACAAA--------------------AGCTC--CACTAA-TTCTAGATGCAATTTG-AAGTCCATTGAGGAAAACTATCTTCATGGTAACAATATTTGTCAGGCTGGGGGTAGGGGGGATAAATTAATCCTCAATATGATATCTGTAGTGCTGTCT-TTTGATAAGTAAG-----------------------------AAAAGAAACCAAGT-------ATTCCACTCATGTCAACAATCCAGGGCAAAAAGGAGAATGTATTTAAAATTGGTTCACAAAAATTTAAAGGCAAAATAGAGAACACATGTGGTCCTTGAACACATAATAGGATTTACTAAATCTCGATTTCTTAAAAATAATTTATTGCTCTTAATAGTCTTTTTATTATTATTCTACAACAGAAGATACTCAAAATTCAGAAAGAAAGACTGTAAAC-TTTAGTTTGGCGTTCACAC--AGTTAAAATACCTGCA--TTTAACCTACAG---AACAACAAGAATTAGGCGGATTAAAGATGTGTTACTGTTGTAACGCAGAACCTGTGAACAAGTTCTTTCATTT---------------CATAGTATTTTTATTGCTTTCTATCTACTTAGAAATAAGAAGCCAAAAAATCAAGCAAGCATCCGACAGGACAAACAGTGGATTCACTCAGAACACAATATGCTGGTGAT-AAATGAATGCAGCTATCAAAATTAGCTGCATTGGCCTGGGGGTGAAATCCATCTTACAAGATCGTGTTGGGCGAGAGAAAGGAAAAGAACAATTGAGTAG-TAGGTGTATCATGTCTTCCAGAAAAGTCATGTCAGCCAAACAGTAATCGAAT-CTCAATTTAGAAACTTGAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATGAAATCCTGATGATCAAAATGGAGGT-------------------------------------TTTTCTGAAGTTTTTATTAAATTTAGCAGAAGCAATGTCATCAAGAACAACACCATGGTCACGTCAGAGGCCATGCTAGTGCA-AGTAGAAA-------------------------CACTGCTTCTGCAAAAGCTGAATTTCCCAAATGAAGCACTTACACTCCAACCTGACAATTGTCATGCATCCTAGGTAGAAAATTTCCACTGGC--TTTATTATTTTCATCATCTCATAATTTATAATAAATAGGCTATCTGCAACTGATAAATATGTCTCTTTAGTAAACAAAGGAATGAAATATCAGTATTTATACAGGATGCATAACTGTAAAAAATACAGATAAATACCATCGTCATACTCTGCCAAGGGAAAGAAATACTGGCTTCAAAGATAGTCTTCAGACACACATTAATTATTGTAAAAATCATACTATAATTATTACCTCAGCAT-TTTGTATCAAATTAAAATCACAAAAATTAAAACAAAACAGCATTTTAAAAAGATTTTTGACTTCTAGTTTCAAAACTACTGTTGATAGAGAAAATAAAAACATTTCTTAATGGTTACCCA-TTGAGAGACTTTACATAAAATCATGATATCTTCTAGAAAAATTTTAGATGAGAAAATTTCATTCCCCTAACAAATCCAGTGTATAAAACTTCAAAGAAAAA-CAAGCGACAAG-AAAATGTGGAAAAATATCGCAGAAGTGGTTAATACCTTTAGGGGACTAGGATATTTCTTGACAAGATGCTTAGATTGAAGCTCACC---TAAGGGATGGATGTGCGGAAAGCATCATTTTGCTCTTG-------------TTGCAC-TCAACAGACACACACACTGTCTTTTTGTTTTTACAATCAAATATATATAAGCAGTAAGTTCAGC-TTCTAAATATGTTAGTGTACAATAATTGTTTCACCTC--ATAATTACATTTGAATATTCTTGATTAAGAAAAATTTAGCAG-TTTTGAAAAGAAGGCTGCATTTACAGTGCATAGCTGTAACAAAAAAGAACATTGTTGTATAGTATATACATAAAATAAAAATACTCCATTTAACATCTGTAAATACTTAACTACATCAGAGAATGTAGCAATTACACTATCTGAACACAT-CTCAGAGAGTTCTACCCAACTCTCATTAGTAATGTAACCCGGTGTCCGCTCCTCAGAAAGAACCGCTGAACAAGCTGCACGCTTGACCATTGACAAGGCTTTTGAAA-TTTGCAGTGGAAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGAAACTTCAAAATGTTA-GGAAACTTTAGCATTCTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAAAAAAAAAGAGAGAGAGAGAGAGA----GAGAGAGAGACAGGATATTAGTTCTATGGAACCTGTGGTTTCTTCAGGATTGTCATATAATCATTACGTTATGAGAGAAAGCTTGCTTCAAGTTGATTCTGCACTTTCTTAAAAAAACAGAGTACAAAGGCTGATGCCCAGACATCAGCGGCTGTCATTTTAGGGTGGTTTGTGGTTGGTTGGTTGGTTGGTTGGTTGTTAGTTTTCTTTCCTTTTTAATTTATATATATATATATATATATATATATATATATATATATTTCCTTTTGAATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAAAAGCAAAGCTGACACCCATGAATAAACATGTGCTTACTGGATA-TCATTCTGTCTCTTGCCTCTTC-AGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCTTGTTGTATTGTTGTTGTTTTGTTTTGTTTTTGTACAGAGAGTGTAAAGTAGGAGAAATTCCTAAGTATGACTTGCAATAGTCT-TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTTTCAGTAAACTATCAAAATCCAGAGAGTCATACTTGCTCTTGGTGGAAGCAGGGTCAAAGTCATCTGAGTTTGAATCTGA-----AAAAAAACACAAG-CCAGTTTAGATACACACTTTGCTGATG chr4 - 94230402 17530930 17530929 17534854 76695549 76695548 76699473 3925 GAGAAATCTGTCAC--------TTTTGATAAAAAAGAGAAACAGAAGTGGATTTGAAACATTCGTTTCCCTTTATTTGCTCAGTGAGGCTGATGTGTACTGCACATTTAAAAAAAAAAAAGAAAAAATAACAGGAATTTTCATACAATGAATTAAACCACAAAAGTACATGTAGAATTGGCAGGTGGAAAACAG-CCCAGTGTGGGCTTAACTAATAGCTCGCTTTCCCTGTCCAGCATAGTCCAACCAATAGCTTTACATGTTCACCTACTGTACAAATTTTACTGTAGCTCCATCAGGTCAGTGGTTCACACGATTGAAAATGTCTGTCACATAGGTACAAATTTAGAATCATCACATTATATTACATGGCTATTCTAGGTCATTTATAGATCAGATCTTATACTACAGTGATTGGAGTTCTCATTACAGCCATCAA-AAAGGACACATAATCATTACCTACTGTAAGCTCATATCTAAAGGGATAAGAAGGTATGTATTTTGTTAGTGGGGTTTTTTTTTTTTCAGCTGACCCAAGAATTACACCCCAGAGGCACAAACTTTCTTCTCAGTGCTGCTCTTGGTGATGGCAGCCCAACTG--ATTTTCAGAGCAGTTCAGTATGGATATTTTTTCCACAATTTTAGGCTCCCTCTGTTTGGATTTGGATCATTTTACCTTACGTAGGAATTACTTCGTTATAGCTCCT----------GAAAAGACCATAGTTTCTAAGTAGCAATTCCGTTACCTGTATTGCAGATGTGGTACTTACCACAGCACGAAAGCAACAG--TACAATCTTCATCTCAAAGACATACAGAGCTATGCTGCAATTTGCTGCCAGCGACAATGTGGCACATGTGTTAATTTGAAATGTTCTTG---GGAGGGGAAAAAAAAAAAAAAGGAAAAACGGAGTTCATA-TTTGATGGGTTATCTACTACAGTGTCTACAAAGGATACAAATAGCTTTATTCAGCAGTCCTAGCTCTACACTAATTTCTATATGTGATCTGTAAATCCACAGAGGAAAGCCATCTTCAAGATAAGAATGCTTGCCAGGCCAGTGAAA-----AAAAAATGGACC-----TATGACTTTT-------TGCCTGCTTGGCAAAAAAATAACCAATTCCCCTCCCCCCCCCCCCCCCAAAAAAAATAAAATCCACACCAATTTATTCATGTCAGCAATATAGGGCAAAA--GAGAATGTATTTAAAATGTAATCACATAAATTTAAAGGCAAAATAGGTAATGCATCTGGTCCTTGAACACATAATATAATCTACTAAATATTGATTTCTTAAAAATAATTTATTGCTTTTAATATTTTTCTT----------TACAACAGAAGATACTCAAAATCCAGAAAGGAAAACTGTAAACTTTTAGTTTGGCATTCACACAAAGTTAAAATACCTGCATTTTTAACCTACAGAGCAACAACGAGAATTATGCAGATTAAAGA-ATGTTACAGTTGTAACACAGAACCTTTGAAAAAGttcttttcttttttttttcctttttcttttttatttttATTGCTATCTATCTACTGAGAAATAAGAAGCCAAAAAATCAAGCAAGCATCCAACA-GACAGACAGTGGAATCTCTCAGAACACAATATGCTGGTGATAAAATGAATGCAGCCATCAAAATCAACTGCACTGGCAT-GGGGTGGAATCAGTTTTCTAAGA-----TTGGGAGTGGGAAAGGA-------GATTAAATAGTTAGGTGTGCCATACCTTTAAGAGGAGTCATGAATGCCAAACAGTAATAGAATACCAAATCTATACATTCACAAGCAAATTCCAAACTTTGCTGACT--CAGTCTAGAGACTCCAAGATCAGATGAAATTCTGATGCTCAGAATAGTAGTAGCTCACTGTTGTGTTTTTGTTCTTTTTCCTTTTCACTTTCCTGAAGTTTCTATTTAATTTAGCAGAAGCAATGTCATCAGCAACAATGTCATGGGCACATCTGAGGCCATGCTAGTGCATAGTAAAAAAAGAAAAAAAAAAACTAACAAAAACCACTGCTTCTGCAAAAGCTGAATTT-TCAGACGAAGCACTT--ACTCCAAACTGACAATCATCATGCATCCTAGGTATAAAATTTCCACTGGCCTTTTCTTATTTTAGTCATCTCATAATTTATAATAAATAGGATAATCATAACTGATAAATATGTCTCTTTAGTAAACAAAGGAATGAAGGATCAGTATTTATACAGGATGCATAACTGTAAAAAATATAGATAAATACCATCATTAAACTCTGCCAATGAAAAG-ATTACTGGCTTCGAGAACAGTGTTTAGACACA---GAATTACTGTAAAAATCATACTGTACTGAGTACCTCAGTGTATTTTTATCAAATTAAAATCACAAAAATTAAAACAAAATAGCATTTTAAAAAGATTCCTGATCTCTAGTTCCAAAACTACCGTTGATACATAAAATAAAAACATTTCTTAATGATTACCCATTTGAGAGACTTTACATAAAATTATGGTATCTCCTAGAAAAA-TTTAGATGAGAAAATTTCATTCCCCTAACAAATTCAGTGTATAAAACTGCAAAAAAAAACCAAGCAATGAGAAAAACGTGGAAAAATACTGCAGAAGTGGTTAACACCTTTTGGG--CTAGGATCATCGTTGACAAAATTCTTACAT--AAGCTCACCAAGGAAGGGATGAATGTGTGTAAAGCGT--TTTTGCAGTCAGACACACGCACACTCGCACGTCCTCACCCACACGCTTTTCTCTTTTTTTTTTACAATCAAATATATATAAGCA-TAAGTTCAGCTTTCTACATAGGTTAGTGTACAATAATTGTTTCACCTCATATAATTACATTTGAGTATTCTTGATTAAGAAAAATTCAGCAGTTTTTGAAAAGAAGGCTGCATTTACAGTGCATAGCTGTAACAAAAAAGAACATTGTCATACAGTATGTACAT-AAATAAAAATACTCCATTTAACGTCTGTAAATACTCAACTACTTTAGAGAACGTAGCAAATAAACTATCTGCGCTCGCACCCAGATAGTTATATCCAACTCTCATTAATAATGTAACACCACGTCCGCTCATTAGAATAAATCGCTGAACAAGCTGCACATTTGACCATTAACACGGCTTTGAAAACTTTGCTGTGGAAGATCAACGTTGTAGACATTTACATGGGTGTCAGAATTAAA---AGAC----GAAACTTCAAAATGTTAGGGAAGCTTTAGCCTTT------------CATTTTCTC---------TTCTGCAAGGaaagaaaaaaagaagacaaaaaaaaaaaaaaaaaaGATCTTAAAACTAAAACA-CATTGCAGGCGTGTGGGACCTGCGGTTTCTTCTGGATTGTCATTTTATCACTGTGTTGTGAGAAGAAGCTTCAT---------------------TTAAAAAAA---AATGCAGTGTCTGATTCCCAGACATCAGCAGCCG--------------------------TAGTTCGCAAATTTGTTCTTTTCTCGCTTTGCTTTTGTTTTCGT---------------------TGTGTTAAAATGCACT--------------ATGTACACATTTTGAAGTTCTACGTTGTAAGTGTATCTCTGTGGAACTGCTGCCATGACGTGTGGTTTGCCCT---------CGGTCGCGAG-------------------------------------------AGGAC------------------------------------------CGCGGGCTGCCCCGCCACCGGTCACCCGCGAAAGCAAAGCTGACACCCATGGACACGCGTGTGCTTGCTGGAAAGCCATTCTGCCTCCTCCCTCCTCGAGCAGCTGTGTTCATGTAAACCA-------------------------------------------------TGGTTTTGAACAGAGAGTGTAAAGTAGGAGAAATTCCTAAGTATGACTTCTAATTGTCCATTATTGAAGGACGTGATGT-CCGTGAGGTATTCGCCATCCCTCCGTTTTCCTCGGGTGTGATACATGTTACCTGCGCAGGCTCCGCTGTGCCTCTTTAAGTAAACTATCAAAATCCATGGAGTCATACTTGCTTTTAGTGGAAGCAGGATCAAAATCATCTGAGTTTGAATCTGAAACCCAAAGAGATGCAAGTTCAGTTAACAGGTACAAGGCGCTGGTG ......:x..:..x--------..x:......x....:..:.......:...........................x.......................................-----------.x.......................x.........x.:..........................x..-...:.::x.....:.......x....:........x.:.........:.......:..:x.....:x.........-----....:...xx............::....::.......:x.................................................x.....................:..........:.....x.............:.....................-..........................x.......:.........x..:.:....---------------------...::....x...:.........:x..:.:......:x:.::....x..:.:....--.......:.x::..x..:...........--:..:..:...:x...:..:.x::.------------------------------x...:x....xxx..:.---------.x.:......:.::.:..:.x...:.----------:....:x...:.x.x::x...:.x..:...x......x:x....:..................:...:...:....::.--:..::...---...x...:x.x......x........x.......:x....:..::...x..::..:.....x.........:....:x---::.::::x.....x.....x::..::.:.:x..:.:.:.-.........:..:---.:.........:..:.:........--------------------.....--......-.....x...::..:..-..:....:x.......:.:.......x.:...x...::...:.....::.x.:x.-----:.x....x:.:.-----.....:x.:.-------..:..-:...::..:x..:-----------------------------....:...:x..:.-------.x.::.:........:....x:.........--.................xx:x.....x...................:x..::...x....................x:..:........x.:.........................:......x.:..:..----------......................:.......:..:.........-...........:.......--................--............---......:.......x..:.........-:......x........:........x....x.........:x...---------------:x.xx.............x..........x..................................:...-....:........x..x........................-.............:........:.:.....:....x.-......:....x:.:..x:....-----.....x.x.:.......-------:...:.:...-.......::...::...:x...::.......xxx.............x....-.:x...:..x.x.:.::x.x:..x.:......:x..:....x.--..x..:..:.......x:x...........:......x...:...:.x:..-------------------------------------...:.........:....x........................:x.....:::.....x...:..x.................-....:...-------------------------.........................-:..:.:.........--.......x........::................x...............--...x.......x:..........................x..x::::.......................................:x.....................................:..............:.:.x..........x.:....-.x..........:.::.:...x..:.......---x.....:...............:..x.x.x........::.-...x.................................:.................::...::.......:.........:.......x.x......................:.......-.....................:...:.....:.........-.................................:..............x....:.....-.....:.::..-....:...........::..............:......x...--.......xx.:x.......:..x....x..--.........---x........:.....:.x.....:.--......xx.::-------------.:....-..xx..xx.....:.x:.x:::....x..........................-..........-.....x...x...........................--..............:.....................:.....-.......................................................::..:.....:.....-......................:............:......x.:......:.......x..x........x:.x.::-.:....x....x..:.............:.........x.x::........x.:....x:..:.................::.........:...x......x:...-.....x.............:..x.:....................:.....:---::..----.................-....:.......x..:------------:..::....---------...:::::x:....:.....::..:.x....:.:.:.:.:.:.:...----:.:.xx:.:...-x..xx:..x:x.:...:.....:.........x..........x.x....:.::...:.....::......xx.---------------------.........---.:.:..:x.x.....x.............:..:.--------------------------.:...x.:x::..x...x..xx:.:x....x.....xxx..::.---------------------.:.:.xx.x..::.:.--------------..:::x................x...x....:..:...:::...............xxx:x:...........---------:....:x.x.-------------------------------------------..x..------------------------------------------...:x:..x.x:.:...xx:.x.x..x.x:.....................:.:.x:.:.......:.....x.-:.......:...:.x....:..-.......................-------------------------------------------------..x.....x........................................x:...x...:-...xx........:.x...-..:....................:..:x.....:.x.:x.:x................:...:.x...x..:.....x...................x:..............:..:...........:.....:....................-----...:.:.::....-:.....x.x.x::...xxx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chr4 + 190214555 23795003 23795002 23795082 80 CAGTATCCTCTCCCACCCAGATTCCATGGCA----AAAGGAAAAAGAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGACA chr4 - 94230402 27602690 27602689 27602773 66627630 66627629 66627713 84 CAGTGATTTCCTCCAAGCATTTCCTATAGAACTAGGAAGCAAAAAGAGGAAAACAAGAGGGAGAGAAAGAAATACAGAGAGACA ....:x::..::...xx..xx.:.:..:.x.----:...x.......::....x.....:......:...:.x.x......... 31M4I49M 56/80 70.0% 84/94230402 0.0% 4/80 5.0% -3807687 -90422715 +18166 chr4 + 190214555 23799705 23799704 23800193 489 AGAGAGGAAGCATCCTTCTTAGAAATATTTCAAGGAGGCTCCAGTTCAATTTGGAAA----TACCATCCAATCCTCCCTCTCTACCAGTGATGAATCGTGATCTAAAGG---CCCCTCTAGGTAGCTTATTTTAAACTCTAGATGTTTTGAGAGACTAGAAACACCCTGGCCTTCATCACTGAAGAAAATAAGTCAAATCAACTCAAGACTTCAATC---------CGTCTTGACTGTTTTTATCAGCCAACATTTGAACAAATGACTTGCCACATTCTATATTTTCATCCCTAGCCTGCTATCTCTCTAACAGTCAGCTGCCTCTCCACTGCTTCCTACTATCTATTTAGCTTGTGGAGTGAATTATAGCATATTCCCTGTGAACAATGCACATCACCTGTATCAATTACTCTAGGAAGACATCCCTTCGTTGGACAGAAGAAAAAAAATCCCTGTATTTGTATTTGTTTCCTTCTTTTTACCAACCCAGAGAAAGTGCATATA chr4 - 94230402 17536418 17536417 17536892 76693511 76693510 76693985 475 AAAGTGAAAATACTCTGCTCAGAGATACTCTGGGAA---TCCCACTCACTCTGGCAAGATGTGTCAGGAAATACTCCC--------AGTGATGAATAATGTTCCAAGAGGGTTCCCTTTAGACAACTTATTTTAAACCCTAGATTTTTTGAGATAC--AGAAGACCTTGACTTCCACTACCAAAGA---TAAGTCAAATCAAGTCAAGACTTCAATCTGTTTATACCGTTTATACTGTTTTTATCAGCCTACATTTCAACAAATGCCTTGCTACCTTTTATATATTCAACATTA-CCTTATATCTCTCCAGCAGTCAATTGCCTTTTCTTAGCTTTATATTATCTGTATAGCCACTGAAGTGAATTATAGCATATTCATTGTGAACAATGTGTATCGTCTTTATCATTAATTCTGAAAATACACCAATTGGTT------AATAAAAA-------TATATTTGTATTCACTTTCTGCATTGTACAAAGCCAAGGGCAGTGGATACA .:..x.:..::.::..x..:...:...:.::::.:.---...x::...x.:...x..----.::..xxx...x.....--------..........x:..x..:..::.---:....:...::.:............:......x........x..--::..x...:..:.:.:..::..::....---.............x..............---------...:.xx................x......x........x.....:..x..:.....x....x.x:..-...xx........:.:......::.....:.:.x:x....:x..:.....:.x....:xx..:...................x:...........:::...::..x.....x.x.:...:::..x...:.xx..x...------..x.....-------.:..........:::..:..x.x..x...x..x...::.:x....x...:. 36M3D18M4I17M8D23M3I44M2D28M3D28M9I68M1D138M6D8M7D51M 336/459 73.2% 475/94230402 0.0% 46/459 10.0% 6263287 NA +41064 chr4 + 190214555 23801701 23801700 23802373 673 CCTCATTCCACGTACAATAAAATCCATACCTAGGTCTGCATAGTTAGACTTGAAAAATTGCTTGCGTCCACAAAAGTACAGCTCAAAGTCAGTTTCGTTTGACCTGCGCAAAGTGTATCCATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATAGCTGTCTCTGCAACGGACAAAGAAAAGTTCAAAGCTGGTTAAGAAGTATTAGTATATGGGACTGTAACCCTTTCT-----------ACTTTGTGAGACTTCTCCAGTGCCAACGTCTGAGCCACTGAATCCATTTATCAGTGTGATTGTCCTGTCAAGCAGCTAAATACTTATTTCTGGGACAGGAAATCTCAACTAGAAAGATTAATAAACAGGGATGAAAGAAAATAAATAAGGTTCTGAACTCAACATGTCATCTGTCAAAGCACTTACATTGGCAACTCCCATCCCAGTAATCTTATGGCCATAATTTTTTACATACGTCAGCTTCTAAACAAGAAATAATCTTGAAGATTCTCACCCATCATCCCGCAGATTTACTGTGCACTCCTCAATTTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTGATTTTACCGACATAAATCACACGGCGCTCTTCCTATGGGGGGAAGGAAGGAGAGAGTTCT chr4 - 94230402 17538005 17538004 17538688 76691715 76691714 76692398 684 CTTTAATTCACAGAGAGCAGAATACCTACCTAGGTCTGCATAGTTAGACTTGCAAAACTGCTTGCGTCCACAAAAGTACAGCTCAAAGTCAGGCTCGTTTGACCTGCGTAAAGTGTATCCATTCTCAAGAGCAGCAAAGGCATCACAAGTATAGCGGTAGGTGATGAAACCATAGCTGTCTCTGTAATTAAAAAAGACAGTCGTGAAAAAAGCTAAAAAGAGTTAACACACATTTGTGTAACCCCTTCCTGAAAGCAAGAACTTGCAGGAGATCCAGCAGTGGAAATGCCACAAGTACAGCATCCATTTATCAGCATGATTGTCCTGTCATGCAGTTAAATACTTACTTCTGGGACAGGAAATCTCAACTATCAAGATTAATAAATAAGGATGAAAGAAAATAAATACGATTTTGAACTCAGCATGTCATCTCTAACAGTACTTACACTGGTAACTCCCATACCAGTAATCTTACTGCCATGATTTCTTACATATGGCAGCTCCCAAAAAAGAGGTAATTTCCTAAGTTCTTACCCATCATCCCGCAAATTTACTGTGCACTCCTCGATTTCACCAAAAACTTCAAACCGGTCCCTCAGATCTTTTCGGGTTGTGTCAGGTCTGATTTTACCCACGTAAATCACACGACGCTCTTCCTGTTAAGAAAGAGCAGGACAAGTTTTT .:.:.x.:...:x.x.::.:...x.x..........................x....:..................................x:..............:..............:..............:........:.....:........:.....................:..:x:.x.....x.:x:x::..:xx:.:...:...x:...::.:.::xxxx........:...:-----------....xxx.:::x.:.xx.....xx..:.:.xx.:x:..x.x.............::..............x....:..........:........................xx............:.:...................x.:..:........:..........x.x.x..:.......:...:.........x............:x.....:....:.......:.x.....:.:...x....::....:.:xx.::....:...............:..................:....................x...........x...x.:..x.......................x..:...........:..........:.x::.::.::.x....x.::x..:. 249M11I424M 537/673 79.8% 684/94230402 0.0% 11/673 1.6% 6263696 NA +4300 chr4 + 190214555 23805799 23805798 23805912 114 GTGAGAGAAAGAAATTGAGACATTGCAAAGAAATTGCTCAACTACCATTATGGGAATAAACACAGCCTATGTATTCAAGGAAATTTGAAGTTAAAGCGAAAATCGACCATATGT chr4 - 94230402 17541433 17541432 17541546 76688857 76688856 76688970 114 GTAATAAAACAAAACTGAACAACTAAAAAACGCCTGTTAAACTACCATTAAGGGAATAAGTTAAACTTGCAAAATTAAGGAAATTCAAATTTAAAGCTGAAATGCACCATATGT ..:.x.:..x:...:...:xx.:.:x...:x:x:..:.x...........x........::xx.:.:.:::x.x.:.........::..x.......x:....xx......... 114M 75/114 65.8% 114/94230402 0.0% 0/114 0.0% 6264366 NA +3389 chr4 + 190214555 23807710 23807709 23807770 61 TTTCCTTGTGTTGTGTTTTTTTCTTTTGTGTGTGTGTGTGTG-----------------------TGTATGTGTGTGTGTGTGA chr4 - 94230402 38302500 38302499 38302583 55927820 55927819 55927903 84 TCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTGAGATTTTTTTGTGGTTTtttttttgtgtgtgtgtgtgtttga .:.::..x.x............:...................-----------------------...:...........x... 42M23I19M 53/61 86.9% 84/94230402 0.0% 23/61 37.7% -14494790 -79735612 +3162 chr4 + 190214555 23807720 23807719 23807807 88 TTGTGTTTTTTTCTTTTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGAATAACATGAAATCTATCCTCTCAACATTTTAAAGTGT chr4 - 94230402 12419686 12419685 12419767 81810636 81810635 81810717 82 TTGTGACTTTTTCTTTTTTGTGCATGTATATGTGCATGTGTGTGT------ATAATGTGATACACAGTGCCAGATTGTTTCAAAATGT .....x:..........x....::...:.:....:..........------....::...x.:x:.x:x:.xx.x::...:...:... 45M6D37M 57/82 69.5% 82/94230402 0.0% 6/82 7.3% 11388034 NA +100863 chr4 + 190214555 23812694 23812693 23815473 2780 CAGAAAAAGAAGAAACCCTACTTTAAAATAAAAGTGAGCTCCAGGCCACTTACAATTGCCTTCTGCCTCTGCCTCTCCCTTTGCTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATATTCTTCCCTCTTCAGCCTCTCGTGCTGATATTCCTCGTAGCTGTCATACCTGGGAAACATAACTTTATCACTAAGTCAACCACCTCAATTTTCATGAGCAAAATGAATAATAATATGGGGAGGGGTATAGGGTTTTGGAGAACATCTTGTCATCTCAAGGAGGGGAT--AAAGGGAGCTAAAGGAAAATGACATGCCTCATTACCTGGGCCGACGGCTGTAGGGCGATCTTGAACGTGATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTGCGCCAGAGGAGAAAAGCAAAAAGGGCATTTGCAACTGCCACTTAACCCAAGTTTATCGGCACTGTGGAGCATCCTCTGGGACACTGTATTACAGAGACTGGCTTTTTCTTCCCAGCTACTAGGGAGATTTCCCAGTGACAGTTTGTGATCATCTAGTCAACTTAGAGGGCTGGGAGTGATGTGCTCTCTCTC----AGCGTCTCTTATTGATGTTAACACTGAGCACCAGGTCTGGTACACTGTCAGCTTTATCTTGCATGGATCTCCACTATCCTGGCACAGGGCAGCTCTCCAGGTAATGGAAAAAGTTGGATGAGCAAGTTTCTTAACAAATTGCTCT--CTCTGATAGGACTGGCTCAAGGCACTGTGCTCAGAGGTGACAGATTTAAGAGAACATGGAGAGAGATGTGAGTGTAACAATGTTCTCGTTAGTTCCAGCAGTGCCAGAATTGCAGTGGTCAGGGGCCA---GAATGGCTGCA---GATTTCAAATTTTTATTTGTATTTTATTTTATT---------------TTTTACTTCTTAGGAACACCTTTTGTGTTAT--------------TAGGGTTTTGCCAAGGTTTACCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTGGAATATGGTGATCGGGAACACGACCTGTGTCGAGAAAAGGACCTTGAACGAGAGCGCATCCTTTGGGGTCTTTGAGAAAATAAGGATTTGGGTGGTGACACAGAATCTCTACATGGAGAGTTAAAAGAAGAACAAGAAGGAGACACATTGAACAATGAATAGGATTGCGTGCCATCCCAAGGGTAGCTCAGTTTATCACTTTCATCTTCGCTGTCATCAAACAGGCCATCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTTTGGAGAATTGTTCATTACTGAAATCACTGTCCCTCAGTTCACCGGTCTTGTCTGCTTCGTCGTCAAAAACAGCTTGACTGGGATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTGAATCTGTGGAAGAACAAATCTGCCCCTGCCAATCAGAGGAGACATCTTTATTTTCTAGTTGTCTAGAGTCTTGGAGCTCCTGTGATATATTAATGAGTATTTCTGTTTTGGAATTAATTGACTGGCAATAGTCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCTAAGGCAAAAATTAAAAAAAAAAAAAAAAAGAGAGAGAAAGAAAAGAGACAGAGATAATGTT-----------CTTAAATGCGAAG--ACACATGTTTCTAATTTTTCCAAGATTTCAGACAAGGGTTCAAACTGAGTGAAGAAGAAGGAAACTAATTTCATGACAAGGCCTGAAAAACTGACTCATCCCCTAAGCCTCTGTCACCAAGAAAAGATGGATCTACAGTGCTGAGCAGGAGGCTGTGATCTTTTGTATTTCAAACACCAATGCTAACAAATCCTGCTTCCCAGAAAACATGAATGCATCACCCCTGGCCTGCACGGAACTAGGCATTATTACCAAAGCTTGCATTTTCAAGGGGATTGTATGGGCTGCTTTATGGAAAAT--TAACAAAGTGAGACTGAGGAATCACGGAATAGCCTTGGTAGCATTTGTCTGCAAAGAACATTGCAGAG-----GATGCAAGCAGCTCAGGGGTCTTTGTCCAATCAAGAGAATCTACCCTTGGAGCCAAGGAATTAAGCAACTTAGAAGAAAAAAAAAAAAAAAAGATGGGATGACAGGAAATATGGGGCAATGGTGAGAGTGACATAAGCAACTTCAAAGTAAGTTCAGTGAAATACGACAGCCGAATGCAGGGACCTAGAGCAACTCTACAACTTAACGGCAGTGATTCTTTGTCGCCACAGTTCATTAACCTAGTAAACCATGGCTAATGTAGGTATAATACATTCTTGTAAGCATAACTAATACATTCTGTCTAAAATATGGTTCTGCAACAGAAACCTAAGTGAACAGTAACACTAAATATCACAGTGCCAGCCGACCATTTTATATAGAGCACAACATAAGGGAGGGTTATGAGACTGAGGGAT-----TGAAACT chr4 - 94230402 17548086 17548085 17550696 76679707 76679706 76682317 2611 CAAAAGAAAAAGAAACC-TATTTCAAAATGAAAGTTATCTTCACAGTGCTTACAATTGCTTTCTGCCTCTGTCTCTCCCTTTGTTTGGCCCTTTCAGATTCCCGTTTTTCATACTCTTTGCGGTATTCTTCCCTCTTCAGCCTTTCATGCTGATATTCCTCATAGCTGTCATATCTAGGAAACATAACTTAGTCATTAAATCAAGCACCTGCATTTGTTAATGTAAATTTAGTAATAC----------------AGTTTCTGGAATGCTTTATTATCTCTCGAGAACCAGCTGAAAAGCAAACTAAATGCACACAAAATGC---ACTACCTGGGTCTGCGACTGTACGGTGATCTGGATCGCGATCTTGCACGTGAGGGAGAACTTCGGTGTGCTCGGTGTCTACAGTGGCTGGACTCATAACAGTGACAAGATCTGT---AGGAAGGAAAAAAAAAAAAAAAATTCACCTCTGTCATTCACTTTGAATCTATTGACACCAT----TTTCTCCTGAGCTACC-TCTTACCTGACCTTACAATTTCTTCTAAGCTACCAGTGAAATTTTCCAGTGACAGTTTGCGATCTCCTAGTCAACTAAG-GGGCCTCAAGTGATTTTGCCCCCCTCCTATAATGTTTCTTATTGAGGCTAACAGAGAGCAGAGAGTCAG--CCACTGTCAACTTCATCTGATAGGGACTGCAGCTAGATTGGCACCGGGCAGCT-TGAAGATAATGGGAAAGGTTAGTTGTGTATATCTCT---CCAATTGCTCTGCCTCTGACCTGACTAGCTCCACTCAGAAAGTGTAAACTTGGCAAATTTAAAGGATAATGGCAACGAGTGTTTCTGCAGCAATGC---CGTAACCTTCAGAGCT-----AATCA----GATCAGGGGCAATAAGAACAGTTGCACTGGAC--CAAGTTATTTTTTAAAATTTATTTCCTTCTAATCACTCTATGTTTTTACTGTTT-------TCCTTCATATTACCAACAATGCTGATGTATGAAATTGCTGCACTGTACCTTGAAGAGGATCTACTACAGGGTGACCTTGATCTCGATCGGGAATATGGAGAACGGGAACAAGACCTGCGTTGAGGAAAGGACCTTGATCTAGAGCGTGTCCTTTGGGATCTTTGAGAAAATAAGGATTTGGGTGGAGATACTGAATCTCTGCATGGAGAGTTAAAAGAAGAGCAAGAAGGCGATACGTCAAATAATGAATAGGCTTGTGTCCCATCCCAAGGGTAGCATAGTTTATCACTTTCATCTTCACTGTCATCAAAGAGACCATCCATTGCTAGTCCTGAATTTATAAACATAGGTAGTTTGGAAAATTGTTCATTACTGTAATCACTGTCCCTTAGTTCACCGGTCTTATCTGCTTCTTCATCAAAAACAGCTTGGCTGGGGTGACCAAAATGCTTATTCAGTTCAGCCCGAATTTCCTGGTCTTGGAGCTGTTTTCTGTTATTACCTTGGGATCCCTGCTTACTTGTCTGTAAAGTCTCTTTCTTGAAATACTGGTCTTGTTCTAGAGAAGAACAAATCTGACACTGCCACCCAGGTGAAGAATCCTTAAATTCTAGTTGTCTGGAGTCCTGAAGTTCCTGGGATATTTTAATGTGGATTTCCGACTTTGAATTCACAGATTGACAATAGTCATGGTCACCAAACAGCCGCAAACTGGGCCGTTTTGTCTTTCTCTCCTCATGTCCACTGGACAGTGCTGTAGTCTTGCTAAGCTGTGCATACAGCTCAGTCTGTTCTGGACCCTTCTTGACAGGGTTGTTTCCTTGAGAACCGGAAGACTCACTATAACGGGGCTTTTTTGAAGGTGGTG---CAACAGTCTTGCATGATGACTTCGGCTTAGGTGAAGTCCTGAAAGGATTATCTTGGTTGGCTTTATGAGGAGGGGTCGTAGGTGGAGTTAGGCCT--------------------------GAAGGGGGAGAAAAAGGAGGAACAGA-ATATTTTTAAGCAGACAGACTTTAGTGGAAAGACACACATGCTTC---------------------------TTTAAAATAGATAAAAAAGCAAG--ACTCATTCTACATCAATTT-----AATTTAATTCA-----------------ACTGGGAATAAGAGTATTTA-------GGGTTTGAGACACTAAAGTTCTGG-----TGACAACAATAGCAAC------------------AGTACTAATGCACTGCCATTAATCTTCA---------ACATCATTTCTGCCCCTCCCCTTCTTTC----ATGATACCCGCCTCTCTGTAGATTCTGATAGAAAAG------------ATCAAGAGATAAAAATCAAAAGACTTTTCTGATAAGA--ATCAAAAAGATTTTGATACAA--AAATGAAAAGT-------------AAAGGACTGGCACT----GTCAGACATCTAAGGAAATTAGCAGACAAAAACCTGAATAAAA-GGAAGTCCAAGAAAAAT------------------AAATGAGCACTACCAAAGCAACTCGTGCAGTACACAAAACTTGAATGTAAGGAAGTACAGCAACTCTACAACTTGACTGCAATGACTCTTTGTCTCCACAGTTCATTAACTTAGTAAACCATTCCTAATGTACGTATAATACATTCTTGTAAGCATAACTAATACATTTTGCCTGAAATGTAGTTCTGCAACTGAAACCAAAGTGAACAATGAGGCTAG----TACAATTGTAATGAACCACTGCACCTAGAACCACATATTAGTCAACGTCATGAAA-TAAGGAGTAGATATGAAACT ..:..:..:........-..:..:.....:.....x.x..:..x:x::...........:...........:...........:........:.....:..:..:..:.........:....:....................:..:..............:...........:..:.............x:...:...:....x.....xx....x:xx:x.:...x.x.:.....x----------------:.x..:....:x:.x.:x.xx:x....:..:.xx:.x.--....x:.:.....x.x.x.::.x....---.:........:.x:..:.....x..:.....x..x..:.....::..::::........:.......:.:x........::.......x........::.:.::..:......:---..::::.....:x.....:::x...::.xx...:..:.:.x::::.:.:...:.:...::.----:x..::...:.x:..:-.x....xx::x..x:.xx.......:x......:..x..:....:..............:....x:..........x..-....:xx:......x.xx:.:.:...----.::..:.........x.:.....xx.....xx::...x.--x........:...:....x::.x...::x.x:...xx:......x........-.xx..:......:...:...:.x..x.:.x:.:...---.x.........--......:xx....:....x.xx..xx:x.:x:.:.xx..:..:......::..xx....x:.x:::...xxx..:.:.....:---...x.x:.:...x:x.-----...::----.:........x.---...::.:....---..:--...:..x..x...:x.x.......:x..---------------.......x:..-------:.:..::.:...:--------------..x.:xx....::x:x.x....................:.xx..x...........:..:.x.........x..x........x......:..:...:............x.x......::.........:...........................x..:..x........:....................:........x..:..:.::..:..........x...:..x................x:....................:...........x..:........x...................................:...............x.............:..............:........x..:..............:.....:.....:..:.....:.....:..:..:..:..........................xx.::.:.xxx.:..xx.......:....:..x:.........:..xx.x.::........x:x...:x:..............x.x......x:...:x..::x...:...xx............:.....:..:..:.....x.....x......x.x.....:.x:..x.....x.:x..:..:............................:.........:..x.....:..:.....:.......::.xx..x:...x:.x......:..:..........:...:.x:..:..:..x..:......:::.:...:..x.....x.x...:...........:..x.x......:.....x.......---.x...........x..x......:....x..x....:...:.....:..........................:..x..:...............--------------------------:...:.:......:.::..::.....-...x.x..-----------...x.:..x:...--.......:...---------------------------..:...x.:::.:..:...x.:.--...x...::.::x...xx:-----..x:.:.:...-----------------..:::...x.::x.x..:..-------.:.:xx...:.xx.:.xx..:..x-----x:...x....:x:...------------------.::.:x......:::..x:.:::..x..---------:...:...x.::xxx..:x.x..:.:xx----..x:..:xx..:x..:.:.:..xxx.--..:x....------------....x.::...:xxx.x:x.:x.:..x....xx....--..::x.:..-----...:...--.:x.x.:::..-------------.:..:.::x:.x..----.:..::x.x:....x..x....x...x.....xxx:..x..:.-..:.xxx..:....x..------------------.x..:....x:x:.....:..x.:xx.:::x.:..:.x.x::.....:.:...xx..x................:..x...:...:........x...............:...........xx........x...................................:..:..:....:.:..........x......x.........:.:.x:...:----:...:.xx:.::x:....:.x:.:x....:.xxx.:..x..xx.:x..:....:.-.:...::.-----....... 17M1D220M16D38M2I27M3D114M3D61M4D16M1D79M1D26M4I39M2D53M1D36M3D11M2I83M3D16M5D5M4D12M3I11M3I3M2D28M15I11M7D13M14I841M3D95M26D26M1D8M11I13M2I11M27D23M2D19M5D11M17D20M7D24M5D16M18D28M9D28M4D26M2I8M12D37M2D9M5I7M2D11M13D14M4D43M1D17M18D219M4D55M1D8M5I7M 1856/2543 73.0% 2611/94230402 0.0% 305/2543 12.0% 6264608 NA +48167 chr4 + 190214555 23818023 23818022 23818810 788 TAAGAGGGAGGTCAG--TGCTCAATCCCTTGATGCCACTACCTTTGCTCATCTTCCCACTAATCTCTG-GACTCTCGATTTCATGCCACAAGCCCAAATCAACAGTGCTAATGCCTCCCATAACCTCTGGATTATTTCCTGCGTGTTGATTTTCTGGGGAATGTGTACATTTTGGTGTTGACAGTACAAGGTATATTCCATGCTCTCTCTTGAACTTAGCAGGTTTTGACAGATTTATGTGAGGACAGATGGCCATTACAGGCTGAAGGCTGACAAGAGGCAGTTCCGAGCATTGTTAACACACTTGCACAAACTCTCAGCAGTGCAGCTCGGTGCAGAATGTAATTCAGACTATAGCTTTTTTATTGCCGCCTATTTTCTTTTGTCAAAAGAGCCTGCTGTGCAGAGCAACAAATGGCTGCTATTACCCAGAATGTAATGGGTGTCAGACAAATCACATAACACAAACAATCAAGAGTATGTAGGTCATATTTCAACAGAGCACAACCTTAGCAATATTTATGATTACTGCATTGAAATGTGCTCCATAATAAACAAGCACCTCTACATCACTCACACTTACGCACTTCTGCACAGCAAATCTGGGAGAAGTGGTACATACTCTACAGTCA-TCTTTTTAAACAGCCCTTTT--ATTTAAAAAAAAAAGGCAAAGACAAGTTTTGTTTTGTTTTTCATTAT-CGCTATGAAACGATTTTCTTGGAGGAGTTTTCTTTTGGGTTTGTTTGTTTAATTGAATGACTCTGATAAATGGTGAGTC---------CCTGGCTCTGTTT chr4 - 94230402 17552376 17552375 17553149 76677254 76677253 76678027 774 TGAGAAAATGGTAAGGCTGCACACTTGCTCGTTGGTGTCACTTCTGCTCATCGTTACACTAATCACCGCTAAGCTTCACTTCAGGCCATGATCCTAAATCAA--GTGTTACAGTATTCTATAACCTTTGCATTATTTCATACGCACCCATTTCTCTGCAAAAGTGTACATTTTAGCGTTGACAGTACAAGGTATATTCTGTGCTCTCT--TGAACTTAGCAGGTTTTGACAGATTTATGGAAGGACAGATGGCCATTACAGGCTGAAGGCTGACAAGAGGCAGTTCAGAGCATTGTTAACACACTTGCACAAACTCTCAGCAGTGCAGCACTGTGCAGAATGTAATTCAGACTATAGCTTTTTTATTGCTGCCTATTTTCTTTTGTCAAAAGAGCCTGCTGTGCACAGCAACAAATGGCTGCCATTACCCAGAATGTAATGGGTGTCAGACAAATCACGTAACACAAACAATCAAGAGTATGTAGGTCATATTTCAACAGAGCACAACCTTAGCAATATTTATGATTACTGCATTGAAATGTGCTCTATAATAAACAAGTACCTCTACATCAGTCACACTTATGTACTTCTGCACAGCAAATCTGTTAGAAGTGGTACATACTCTACAATCACCCCCCTTAAACAGTCCTTTTTCTTTTTAAAGTAAAAGGCAAGTAT-------------TTTTTCATGACATGCCATAAAACCATTTTCTTTGTAGGGACT-------------TTTGTTTAATTGAATGGCTTCAGTAAATGGTACGTTTGCACTTTGCCTTGCTCTGTCT .:...:::x...x..--...x..x.:x..:.x..x::::..:.:........x.:x........x.:.-x.xx..:x.:....x....::.x..:.......--...:..xx.:x.:.:.......:..x........x.:..::::x....:::x.x:..x...........:.:......................::........--.............................x:.............................................x..........................................x.x.....................................:...................................x................:...................................:.......................................................................................:............:............x.........:.:....................xx.....................:...-:.:::........:......--x...x...:x.........:x.:-------------........x.:-:..:..:....x........x.x:.:.x:.-------------................:..::::........:x..:---------...x.......:. 15M2I51M1I33M2D104M2D422M1I20M2I23M13D11M1I30M13D36M9I13M 645/758 85.1% 774/94230402 0.0% 46/758 6.1% 6265647 NA +26261 chr4 + 190214555 23824275 23824274 23825051 777 CTTACCTGCAGTTCCAGAGAGTTCCACACTTAAGGTGCGTTCAATAGTCTTGTTCTCAAATGGGGAACCCTTGGGGTCACTGGAAGATATGGCACATTTATAAAAACAAACTGAAATGGAGTTGCTGTAGCC-AAATGTATTAGAACCCCCTTCCCTTTCAGAAAATGGTTACATTTCTTAATACTTACTTTGGTGACTCTGGGGTCAGAGGAAGAGATAAAGTTGTTGGTTTGGCTAAAGAAAAAAAAAAGAAACTAATTATGTAATATT-----------------------GAGTGTCTTTTAGATTTCTTTTCTC--------TCCACAACAGTCAAGTTGGAAAAACAACCAGAAAACTCAAAGACTA------------------AACTAAGGAA--TTCTCTGAATATTGAATCAAAGTCAGACAAAAGTCCATTATGCTAAAACAA--ATTCCAAACAGCGTTTGCATCAGTAAACTACCATTCGAAAACACATATGAAAATAGAATTTTTCCAAAAATGAACCCTCCCTGTTACAGAT-----ACAAAATTTGCATCAT--ACCATCAGAGAGAAATAATGTTTTCTAT----TTTAATTTGGAATACAGTACACGGTTTGTTTAGACAAGAAAACAGCAGAGCAACTATAAGGCGACAGAACATTATGAATATTCAGTTGATTTTACTCCTAAAACGTATAATTTTATATCTAGCCCTGATAATA-GTTATTTCTATGAGGCCAAAGCTCATGCAGTAACTATTCCACTCACTGAAAATTAATTGAGAGATGATGGCAAATTGTGGGCATTGATCCAGATGGTTTAGAAGGGG chr4 - 94230402 17557478 17557477 17558304 76672099 76672098 76672925 827 CTCACCTGCAGTTCCAGAGAGTTCCACACTTAAGGTTTGTTCAATAGTCTTGTTCTCAAATGGGGAACCCTTGGGATCACTGGAAGACAGGGCACATTTATAAAAACAAGCTGAAATGGAGTTGCTGTAGCCAAAATGTATTAGATCCCCCTCCCTTTT--ATAAATGTTTGCACTTTTTACTACTTACTTTGGAGACTCAGGTGTCAATGGAAGTGATAAACTTGTTGGTTTGGCTAAAG--GGAAAAAAGAAAACAATTATGGAATATTTAAGCACTCCATAACATATACCAAAAAGTCATCT---TTTATTTTGGCGATGGAAATCCCTATTAGTC-AGTTAGGGCTGGGTTCTGATTGTTCAGAAGCCATTTCTGTATACTTTGGATAAATAAGGAGACTCATCCTGATTCCTTAGCACTGGCACAAAAAGGGCATCTAAATTTCAACAATGATTTACAACAATTACTGTACCTCTGAAATGCAGCAC-ACAGCCCAAATGCCA--AGAACCTTTCAGAAGAAGAGTAGTACGTGTTAAAAATCAATGAAGAAATCTACAGGATACACCATGA-----AAATGTTATTTTCTCCTAGATTTAATTTAGAATACACTCTACATTTTATTTGGAAACAAGGGCAGCAGAATAACTACAAACTAACAGAACGTTATGAATATTCAGTTAATTTTACTTCTACAGTATACAATTTTATATGTAGCACTGAGAATAGGTTGTTTTTATGAGGCCAGAGTCCAACTTGCTATAGTCCAAATTTCTGCAAATTATCCTGCAAACTATGACAAGCCATGGATTCAGTCACAGATGGTTAAAAATGGG ..:.................................x:.....................................:...........:.x...................:......................-............x......:..:...--:x.....x..:..:..:...x............x.....x..x....:x.....x......x..................--::..........x:.......x......-----------------------:.:x...x.:.---...x....xx.--------...x:.x:....-....:.::xx:x:x:.x..xx::...:.::.:.------------------..x......:--.:x..:x:..x::xx.x..xx.x..x.x...:.x.xx:..x::.xx.....--...:xx....::xx:..:.:.xx.:..x.:.x::x.-.x.:.x..x...xx.--....::....x:..:.x..::xx.x.x.....x.:..-----.x:....:.:..xx..--.....x.-----....:x.:......x:----........:.......x.x:..:x...:...:..x.x:.:::.......::.....:..:x::.......:................:........:...x.:::..:..........x....x....x....-...:...:..........:..::..xx:x.:x.:x:.:.x.x.:x...x......x::x:x.:.:x...:...::::...::x:x.x:x.........x.:..x... 132M1I26M2D80M2D28M23I11M3D11M8I12M1D33M18I10M2I51M2I36M1D15M2D37M5I16M2I7M5D16M4I133M1I107M 545/761 71.6% 827/94230402 0.0% 82/761 10.8% 6266797 NA +3295 chr4 + 190214555 23827813 23827812 23827890 78 GGAGAAGGGGAAGAAGGAGTGGAAGAGGAAGAAGAAGAGGAAGGGGAGAAAGCAGGAGGTGAAGGAGGAGAAGGAGAA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ..:...::::.....::.:x....:.::...:..::.:..::....:.:.xx:.:........::..:x.:.:..... 78M 48/78 61.5% 78/94230402 0.0% 0/78 0.0% -16644729 -77585673 +75049 chr4 + 190214555 23827963 23827962 23829664 1702 GCTGCATAAACACTATTTACTACTTCTTAAGGTGTATATAACAAATCACTGGTGCCTCATTTTTTCCATTACTGGAAGGGAAAAAATAAAAGCTCTATAATGAATTGGTTAGCCCAGCTTGTTCATAACCTCAATTATCTC--AGC-------TATTCTGAGATTCATATAAACATCA----------TGTGATGTTGCAATTCCTCACCACCTGGCTAACATTTCAGGAGTCTTTTGGTGCTTGTGAATT--------AGACTGCCTATCAGCTGAATAGAAT-----------ATGTTTAACCTGTGTCCAAGGAAAGGTTTCTTCCCCCGCTCTGTAATAAG----TGCTGAATTCTCTTTCCACAGAGTGACGCTGATGGGACGGAAGCAAGAAGTTGGTGTGTTCTCAGACTTTGCATGTGCTTTCTTTGCTTCCAGTGCCCTCACCAACAGCTCGTTTTGG--TCCCCAGCCTACCTTGTAAGTGTTGTGACTGCGACTGTGTGTGGGACTTCTTTTTGGAGGTGCATTTGTCTCTGCTGCTGTTTCTGTTCTCTGTGGGTTTGGTGTGAGGAGGGTCATCGTTTGTGGTCAGATATTTGAGAAGCTCCGAGCAGGGACGTCTTTGTGGCTTTTGCTGTTGACAAATACTCTTCGCTTTATTGCTCCATGAATTCTCAGTCTTAAAAACAAGGCAT---------------------------AAAGAAAGCTAAAATTAGTGAACTGAACCTTATCAGAATGGATATAGGTTTTCTGGAGAGATGGGATTTTTCAATGAAGTGTTCAGTCTAAGTGTACTAGATCTATGAGCTGTGAATAACTGTTTGCAGAACAAGGAAAGAAAATTACATTTAAAATTCCTAAATGACATTTATGCAGCTTTTTATTTTATTTCTCCTACATTTCAATGTTCCTACTCAGCAACATGTAACTAACAAGACCCTACAGCGCCTTTATTGTGAATAAAAAAAATCGGCTGGCTTAAACCTTAATTTGCCACTGATTGCTGACGCCCAGTACTCACAACTCTCTTAAGTACCCCTTAATGCTCCGTTTTCACTCACAGTGAATAGCAAGACAAACATTGTTTAATACAGCCCACTAGCTGAATTATGGCATTGCCAGCATTCCATCCAATTAATGGCAGAGATAGATGTTTTGTGGTGATTCCAAAAGCAATCTTTCTCAGGTTAGACAGCTAGCAAAACAGCAATTCTGCATCTTAAAGCCACTCATAGATAATACCAGCTTATCAGCAAATTTTACCGTGGCCCACAATGCTGCAGGTAACAATAAAGTGGGCAAGAACTAACAGACAGTGGCACTTCCATTCCAAAC---ACCCAAAGACGATGCGTAAATGAACTCTGCCTAGTTTAAAGTAGCTCAAGCGCTGTTTACGGAATCCCATTCATAATCTATTTCATCATTATGAGGCAGCTTCGGGGTCCCAGCTGAATTAATACC-----TACAAACTTA---TTTGTTTTACTGCTTCAAGCCAAAATCCTTTGGTACA----------------TCCCCCCTGTATTAAAAAATTTACATTTGTACCTTAACAATTGCAGGGTTTGTTCTGATCCTGTGATTGTGATTTGCATGGTTCTGGGTACTGAGACCACTGCATTCATTATAACTTAGCTGAGTGTTGGCTGGTGCCAGTAAGAGCTTCTTAAGCTAGAAACATTATCAGGGAAAG---------GGAAAAGCAAGTAAAGTTATGCATCTTTTAAGCATTGGAATAAGTTATTGAAATTTT chr4 - 94230402 17561272 17561271 17563019 76667384 76667383 76669131 1748 GCAGCGAGAGCGCTATTTATTGTCTCTTAAGGACGATGTGGCAGGTTAACAATGCCTTCGGTTTTACACTG------GCAAAAAGAAAGAAGCTCACTAATGAACCAGCCTGCCCAGCTTGTTTAGGGGTATAATGATTTCTTAGTGGTACAGTACACTGTGA-----ATAAATATCTCCAACTCGCTTGATATATTGACATGT---AGCGTTTGTTAAACTTTTT-----TTTTTTTTTCCCTGAGGATCCTTTTCTGAGACTGGGGGCAACAGGGACAGGATTAAAACTTCAGAAGTTTAACCT-------AGCTAA---TTCTAACTTCATTGTAGAAGAAAGAGACGCTGGGTTTAC------AATAATAATCC--AAGGAACAAAAG--AGGTATGAGGGTATTCACAAGCATTGTAT---CTCACCTTCCCTCCAA------AACCAACAGGATGTTCTGTGCTCCCACACCTACCTTGCAGGTGATTTGTCTGAGACTGCAGATGGGGCTTCCTTTTGGAGGTGCATTTCTCTTTGCTGCTGTTCCTGTTCTCTGCTGGTTTGGTCTGAGGAGGGTCATCGTTCGTAGTCAGATATTTGAGAAGTTCAGAGCAGGGACGTCTTTGTGGCTTTTGTTGTTGACAAATGCTCTTCGCTTTATTGCTCCACGAATTCTCAGTCTTTAAAACAGGGCATTaaaaaaaaagaaaaaaaagaaaggaaaaaaaaaGCTAAAATTAGTGAACTGAACCTTATCAGAATGGATATAGGTTTTCTAAAGAGATGAGA-TTTTCAATGAAGTGTTCAGTCTAAGTGTACTAGATCTATGAGCTGTGAATAATTGTTTGCAGAACAAGAAAAGAAAATTACA-TTGAAATTCCTAAATGACATTTATGCAGCTTTTTATTTCATTTCTCCAACATTTCAATGTTCCTACTCAGCAACATGTAACTAACAAGACCCTACAGCGCCTTTACTGTGAAC-AAAAAAATAAGCTGGTTTAAACCTTAATTTGCTGCTGATTGCTTGAGCCCAGTATTCACAACTCTCTTAAGTACCCCTAAATGCTCCGTTTTCAGTTACAGTGAATGGCAAGACAAACATTGTTTAATACTGCCTGCTAACAGAATTATGTCAGAGACGCCACTCTTTCCAATTAATGGCTGATATACATCTTTTGCCAAGAATCC-AGTGCAATTTTTCTTAGCCCAGACAGCTGGTAAAATGGCAGTCTTGCATCCTGAAGTCACTCATAAACAACACCAGCCCATCAGCAAATTTTATCGC-ACCCCTACTACTCTGTGTATCAATAAAGTAGGCAAGAG-TAACAGACGGTGGGACTACAG--CTGAACTCTGCCAAGAGAAAAAGCAAAAATGAAATATTCAGAGCATAAAGGAGCTCAGGTGAT-TTTCTGGAACCCAGTCTATAATCTGTTCACGTATTTTGAGGCAGTTGCTGGATAGTAGGCAGATTAATACCACACATATAGATCTACTGCTTACTTGATTGCTGAAAGCATAAAAGCCATGTTACATTTTTTCGTTCTTTTTTTCTCCCCTTATTACAAAGATTAAGTTTGTACCTTAACAACCACAGGGCTTGTTCTGATCCTGTGATTTGTGTTCGCATGGTTTTGTGTGCTGAGACCACTGCATTCATTGTAATTTAGCTGAGTGTTGGCTGGAGCCAGCAAGAGCTTCTTGAGCTGCAAACA-CATAGGGAAAAGGAGGTGGAAGGAAAAG--AGTAAAGTTATGCATC-TTTATGGATTAAAATTACTTGTCTACATATT ..x..:x:.:.:.......:.:::........xxx..:.::..::.:.x:::.....:xxx....x..:.:------.x:....:.x.:......xx.......:::.::x............:.x::x:x:...x..:..--..:-------..:x...x..-----.....:...x----------..xx..:...xx..x:---.x.:::..x:x...x...:-----.:....xx.x.:..x.:..:--------......xxx::x.xxx.:.:..:..-----------.x.........-------..xx..---....xx.::.::.x.:x..x..:----:....::..:x.------x.x.:.:.:x.--.x..:..::...--..:x:.x:.x..:...x..::.x...:..---..:x.:..x.:....:------x........xx:...:..x--....xx:.........:.:...x.x..x...x.....::x:....:....:................x...:..........:..........:x........x.................:..:.................:..x..........................:...........:....................:..............x......:.....---------------------------...:..................................................::.......:..-....................................................:...............:.............-..:...................................:........x.........................................................:......:-........x:.....:................::.........x:x........:.......................x...............x.:.........:.......................x...::...:.x........x..xx.x.:x..:..:x.............x..x...x..x.....:x:x..x...-.:x.....:.....:..x::........:.:....::...:.::......:.:...:........:.:..:......::..............:..:-:...x:.x.:..x::x...x.........:.......:-........:....x...x.x:--.::...---:..x.:...x:.x..:x.......x.x.x.xx..:x.....x......:.:.x.-...x:....:..x:.::.......:..:xxx:...x........:.x.x..:.xx:..x:::.........-----..:.:.::..---:..::..x.:....xx....xx...xx.:x..x....----------------.:.:...:x.....x...:x...x:...............:::.....:...................xxx:..:........:..x..:....................:...:...................x.....:...........:....:x.....-:..x:..:....---------.......--................-....x.x...::...x.x..:.:x.x..x.. 71M6D64M2I3M7I10M5D10M10I16M3D19M5D20M8I25M11I11M7D6M3D23M4I12M6D11M2D12M2D29M3D16M6D19M2I233M27I66M1D82M1D113M1D206M1D97M1D38M1D21M2D6M3I54M1D71M5I10M3I37M16I164M1D12M9I7M2D16M1D31M 1268/1641 77.3% 1748/94230402 0.0% 168/1641 10.2% 6266691 NA +24087 chr4 + 190214555 23831450 23831449 23831776 327 TCATTCTAAATGAAAAAATCCAAACCTTATTGTGACTACATCATACCCATGCAGCGGGTAGCCAGAGGCAACTCCAATTCCTGCTAAACAGTAGGAAGGGTTCTTACTAGAGACGGCTCTTCTGCCTCCTGGGGTGGAGGGGTGCCGTCAGGCATGGAGGAAGGACTAGCCTCATTGTCAGTGGTCACGTCTCCATCTGTCAGCGCATCAAATGAGGGCAATCCGTCTTCATCCACAGGGAGACTGTCTAGTGTCTCTGTGAGGACTGCTAGCAAGTTTGCCTCATTCTCTTCATCTATCTTCTGCAGAAAGAGAAAAAAACAGAAG chr4 - 94230402 17563771 17563770 17564096 76666307 76666306 76666632 326 TCAGTCTAAGTGAAAAG-TCCAGACCTTACTGTGACTACATCATACCCATGCAGTGGGTAGCCAGAGGCACATCCAATTCCTGTTAAACAGTAGGAAGGGTTCTTACTAGAGACGGCTCTTCTGCCTCCTGGGGCGGAGGGGTGCCATCGGGCATCGGGGAAGGGCTGGCGTCATGTTCATTGGTCACATCTCCATCTGTCAGTGCATCAAATGAAGGCAATCCATCCTCATCCACAGGGATGCTGTCCAGTGTCTCAGTGAGAACTGCTAGCAAGTTTGCCTCATTCTCTTCATCTATTTTCTGTGTGCGGAGACCAAAAAAAGAG ...x.....:......:-....:......:........................:...............xx...........:..................................................:...........:..:.....x.:......:..:..x....xx...x.......:..............:...........:........:..:.............x:.....:........x.....:...................................:.....::x:x:....xx....x.::.. 17M1D309M 284/326 87.1% 326/94230402 0.0% 1/326 0.3% 6267679 NA +9710 chr4 + 190214555 23833393 23833392 23833733 341 TGACCTGCTTCCAAAATCTTCTTTTGAAAGT-TCTGTATGCTATGACATTAACAATATGGGCTAAATTATCCCACACAGATTTTATTATAAAATGCACCTAG-CTGCTGACATCTAATGAAGCTAGCAGTACCCA------CACTTCCTTTCTCTCT--AGCACTGAACTCCAGTTAATTGACCTGACAAAATTACAAGAATCACAGAATAAGATAGCTAATCAGAAAATCAAATTGTATTACTAGAGAAATTAGGCAGGCCTTTATCACGTATACATTCTATTTTCACATAAAAATTGTTTTCCTTAATTCCTGATCACCCTCCATCCAGCAGTAAAACTAAGGACTTCT chr4 - 94230402 17564280 17564279 17564610 76665793 76665792 76666123 331 TGCTCTGCTTT---ACTTTTCCTCTGCAACTCTCTCAATGC---AGCATTAACACCA----ACAGATAGTCAGGCAGGGATTGCATTACAGGATGTGCCGAGGCTGCTGGCACCTAACGATGGTGTCAG--CCCAGGCTGTCTCTTTCTTTCTCTTTTGAACATTGAACAACAGTTAATTGACCTGACAAAATTACAAGAATCACAGAGTAAGACAGCTAATCAGAAGGCCAAAATGAATTAACAGAGAAATCTGGCAAACCTTGTTCATGTACGTAGCCCA-----AGACAACATCTCTCTTCCTCACT--CTGGAAACGCTTGCTCCAAAAACAAGG-GAAAAACTTCT ..x:......:---.x.:...:.:..x..x.-...xx....---::........x:.----x:.:..x:..xx:..x:....x:....:.::...::..x..-......:..:....:..x.x.:x...--....------.x...:........:.--.:..:.....xx.....................................:.....:............:::....x..x....x:........:x....::....xx...:...:::.x:.:.-----.x.:..x.x:.x.:.....:.x.--...:xx..x..:xx....:x.::..::-x..::...... 11M3D17M1I9M3D13M4D41M1I26M2D4M6I16M2I123M5D23M2D27M1D11M 227/321 70.7% 331/94230402 0.0% 30/321 9.3% 6269113 NA +24023 chr4 + 190214555 23835703 23835702 23836303 601 TGTTTCAAATTGTCTGTGTTTTCTTTAATCATAGAAAACTGGGAAGAAAACTTGCTATTTGCTGAT---------------------------GACACTT---TGTGTTTATAT----------AATGTTGAGTGGATATTGCCCCTCACTGTGGCAATTTCAATTAGTTTAGCATGAGTTTCAACAATCAAACACCCCGGAGAAGGCAATGGATGTGACAAAGAGGACTCTGTTAAACAATTAATGTCACTTCCCATTATTGCTTTGGTCCCAATTTACAGAGCAAATAAATCAAAGTCACCGCAGATGAAGCACACTGGCCTACTCACACATGTCTGTTCACAGGTGACAGGGTA-TAGAAACACATTAGTCACTGCACTGACATTGCAAGATAACCTTTCAAAGACTCGGCTCTGATACTGCTTTCTAATTGTTTGAAAATACTATTTTACAAAAAATATATGTCTTAGCTCCATCCGAGTTGGGGAAAAAAGAAAAGAAAATGCAGAGTAGGGAGGAAGAAAGAGCAGGTCACCAATTAGACAGTGATCTACAGCTGCACAAACT-----------------AAGCTCAGCCTTGGAGCTGGCAGCAGAGGCGGAAGGAAAGGTAGAAAACAGGCCAA---CGGGCATTTCCACAGTT chr4 - 94230402 17566117 17566116 17566761 76663642 76663641 76664286 645 TATTTCTAACTGGGAATGCCTTCTTCAATAATAGCATGCCAG-AAGAAACCCTGATATTTGCTGTTAGCTGCTCAGCTCTCATGCTTTAAACCGACATTCAAGTGCACTGACATTCAAGAACAGAAAGTTGAGTGGACACTGGTCCTCATCACAGCAATTTCAATTAGTTTTGTACAAGTTTCAACATTCAAACACCCCAGAGAAAGCAAAGGATGTGACAAAGAGGACTCTGTTAAACAATTAATGTCAGTTTCCATTATTGCTTCAGTCCCAATTTACAGAGCAAATAAATCAAAGTCACCACAGATGAAGCACACTAGCTGGCTAACACATGTCTATTCACAAATGACATGGCAGCAGGAACACATTAGTCAGGAAAATGACATTGCAAGATAACCTTTTAAAGGTTTAACTATGCTATTGC-TCCTAATTGTCCTAAATTACTGTTTATAAAGAAATACATTTATTAGGTACAGCAGAAACGGGGCA-----GAAGGGAGATGCAGAGCGGGGTGG----TCGGGTACCTCACCGTCTGAGTAATAATC-ACTGAAGCAGCAACTTTCTGCTCTGCTCTCACAGCCTGAGTCTTGGTGTTGACAGCACTGG-----GGAGAAGCAACACCGTGGCCAAATGCAGGATATTTCACAGTT .:....x..:..xxx:..::.....:...x....x.x:.::.-......x.:..x.........x.---------------------------....:.:---..:::.x.:..----------..x..........:.:..x:.....:::::.................x.:.::..........x...........:.....:....x.......................................x..:............::...................................:...............:..:x:..x..........:......::.....x..:.-:..:.............xx:x.x.....................:....::.:::..x..x..:...-.:........::x...x....:...xxx..:.....:..x.x....x.x..x.x..:x:....x.-----:..:.:.:........::...x..----xx.:.:.xx.....:x:.::::.:.:...-..x.xx...xx....-----------------.:x..x..:.....x.:..:.....xx..-----...:.:.:.:x.xxxx......---.:..xxx..:....... 42M1D23M27I7M3I11M10I233M1I67M1D65M5D24M4D29M1D15M17I29M5D22M3I17M 437/584 74.8% 645/94230402 0.0% 78/584 13.4% 6269586 NA +29361 chr4 + 190214555 23850979 23850978 23851681 703 AAAGTAGCTCACTGAATATTC---TAGAAAAAATGTCATGTGTTTCATTGCTTCTAATGAGTTGCTGCAGTTCAGAAGTTTC-ATTACATTCTGACAATTAAGTTGCTAATAAAGTGAGGAACCACTAATGGACTTATCCATCTCACAAACTCAAGATCCAGCTAGCAACCTAGAACACAATTT-CATCACTGGAACAAAAATAATTCTCATTTTGCAATACACATAGTGATTCGATTTAATCTAGGTAAACTGCAGATTGCTCCTGCACTTGACATGATGTTCTGACTG---GGAACATACACACACACATGCTCACACACATACAATATTAGTAACAATATGTTGTGCTGATGCAGACTGTATTATCAGAACCAATGATAAGATGATAAGATATTGTTATGCTGGGA-CAATGCAATGGCTATGGACCCAATATCAAAAATTTATGGTAATTGAAACCACAGAATCTTAGGAAATGCAGTCGATTTCATAGAGTATCAAAGGGTCACTCTATTCAATTTATATTTGAGGCTGAGCACAATATTGAAAAAACACGTGAAAGCAAATGATGTTATCAGTTGTCCAGGATTCAACAACTGACTTACTATCTAAGGTAATTTACTGATTACCAAATATGTGCATAACCTGTGTTGAGTCTTGTGCTTGGCACAC----------CAGTTCTTGCAAAAAACTTAACACTGTGAACGCATTACTA chr4 - 94230402 17570181 17570180 17570865 76659538 76659537 76660222 685 AAAAGAGCCTACTAAATATTCCTCTAGCACAAA-GTCACTTGTTTTATTGCTTCTAACGAGTTGTTGCAGTTCAGATGTTTCCATTACAGCCTGGCAATTAAGCTTCTAATAAACTGAAGAGCTACTAATTGACTTATTCATCTCCCAAACTGAGGATCCAGCTAGCAACCTGTAACACATTTTACATCTTCTGACCAAAATTCATTCACATTTTGCAAGCCAT-------TTCAATTTCATTTGTGTAAACTCCATCTT--TCCTTTCTGTGATAGTAATCTTTGATTGTGGGGAAAAGACAAA-ACAAAAATTCATCCG---------------AGAGTAAGCTTTCGTGCTGCAGA-TGTGTTAGCGGGACT--------GATGATAAGATATTGCTGTGCTCGAATCAGTGCGCCGGTGGTGGACCCAATATCAAAAATTTATGGTAATTGAAACCACAGAATCTTTGGAAATGCAGTCAATTTGACTCAGTATCAAAAGGTCACTCTATTCAATTTATGCTTGATGCTGAGCACAATATTGAGAAAACACCTGAAAGCAAATGATCTTATCAGCAGTTTGGGCCTCAGC-ATTTACTGACTACATAGGCTAATTTGCTGATTACTAAATAAATGCATTACCTACATTCTGTACTG-GTTTAGCTCACAGAGGGGCTTCTTCCCTTGCGCAGAACTTGGCTCTGTGAAAGCACTTCCA ...:x...::...:.......---...x.x...-....:x.....:...........:......:...........x.....-......x:...:........:.x........x...:..:.:......x.......:......x......x.:.................:x......x...-....x::x..x.....x.x....x..........xx..:-------...:....x..:.:x.......x..xx..--....x:x:x...:.xx.xx:.:...:..---....x.x...x.-...x.x::...:x.:---------------.x.:..x.:.x.xx..x......-...:...x.:.:..:--------...............:.:....x.:.-..:...:x:..:x:..............................................x............:....x.:xx.........:....................::....x.................:.......x..............x.......:x..:::..x:...:.-.:.x...x....:x..:.x......:........:.....x:.....x....:::..xx..x:..-.:..:..x...----------.xx::.....:x.:.....::.x.......x...:.x.:. 21M3I9M1D48M1I101M1I39M7D29M2D28M3I12M1D15M15D23M1D15M8D26M1I184M1D65M1D11M10I40M 513/666 77.0% 685/94230402 0.0% 56/666 8.4% 6280798 NA +39240 chr4 + 190214555 23866231 23866230 23866927 697 GCTCGCCTTTCTTTACCTAAAAAAAATAAATAAAGCCCTAGAAACATTTCTTTCTTCTCATAGACATTAATAATGATAGCTTGAACTGTAAAGATTTGGTTTTACTGAAGGTAATGGAGTAATGTTTATTTCCATTAGACTAGGCCTATAAAATCCTCTTTTTATAACCATGAGCCTCCAATTTCAAAACAGCAAAGCTTGACATTTTGGTCTCTGACAGGCAACACTTAATATTGGGATGTTTTAAAAATCTATATGAAAAAAGCTCTTAACACAAGATAGGCCGAACATTTTCCCCGCAAATGGTTTGTTTTAGCTATCTCTCTTCCTCCCTGATGGACCAGGAAAATCAGACAGCTTATTGGCTTAGTTTGTTAGGCCAGGTTAAAGGGATGCAATGCCGAAAGACTCTTACAGGAGCTTACCCTTGAGCTAAAAATAGCAGGCACTAGAGAATTATCTTAAATACGACCAAACTTGTTCGGTACTGTGAATGCAGATAACTGTAATACGTTTCCATTTTGGGTCATTTCAGAGCTTTTTTTTTTAGCTTGGCTTGCTGTAGCTGACTATTTAATTCATTTCTGATTCTATTTGTCACATTTGCTCTCAGAGATACCGCCCG-GGGGTGCTTGACTCAAGAATCCTTCTTATTTTGCTGCGCTGCTTTTGTTAAAACCTAATGAGCCATTGAACT chr4 - 94230402 17574766 17574765 17575443 76654960 76654959 76655637 678 GTTCGCCCTTCTGTCCCCAGGAAAAACGAA-----------ATCCATTCCTTCTCTCTCAGACACATCAATA-CAGCAGCCCAGGCTGCGAGGGTTTGCCTTCACCATTGGCAGTGCAGTGATGTTTATTTCCATTAGGCTGGGTCTATAAAACCCTCCTTTTATTTCTGCGCTTCCACAATTTCAAAACAGCAA-GCCTGACATTCTGCTCTCTTACAAGCCACGCTGAATACTGGGATGCTTGAAAAATCTATACAAAGAAAGCTCTTAAGACAAGAGAGGCTGAGCGTTCTTGCCACAAATGGCTTGTTTGAGCTATCTCTCTTCCTC----ATGTTCGGCGGAAATCAGACAGCTTATTGGCTTAGCTTGTTAGGCCAGGTTAAAGGGATGCGATGCTGAAAGGCTCTTACAGAAGCTTACCCTTGGACTAAAAATAGCAGGCACTAGAGAATTATCTTAAATACTACCAAACTTGTTCTGCGCTGTGAATGCAGATAACTGTAATATGTTTCCATTTTTGGTAGTTTTACAGC---TTTTTAAAGTTATGCTTGCTTTAGCTGACTATTTAATTAGTTTCTGATTCTATTTGCCACTTTTTCTCTCAGAGATATAGCCCGAGGGGTACTTTGCCTATGAATCCTTTGTATTTAGCAGTGTTGCTATTGTTAACATCTAATAAGCTGTTGGATT .:.....:....x.x..:.::.....::..-----------.xx....:...:::.....x.x....:....-::::...:::::...::.:.:....x:..:..::xx..:.:..x...:.................:..:..:........:....:......xx.:::.xx:.:x.................-..:.......:..x.....x...:..x..:..x....:.......:..x...........::..:...........x......x....:..:.:..:.:x..:.......:......x.................----...xx.x:x.:........................:.........................:....:.....:.........:............::.....................................x.............x.::........................:...........x...x:...:.x...---.....xx..:.xx.......x.................x:................:...x...x............:x.....-.....:...x:.::.x........:x.....x..x.:.:....x.......x.:.....:...::...:.:. 30M11D31M1D122M1D135M4D203M3D84M1I72M 539/677 79.6% 678/94230402 0.0% 21/677 3.1% 6291465 NA +16738 chr4 + 190214555 23870978 23870977 23871384 407 GGGAGGTCACACAGTCCTATTGGAGGGTATCATCCCTTAT----GCTGAATCACAGAAGAAACACATTTGCCATTGAAAGACAAATTA-AACAGGGCATGGCTTGCACTATGTGGGTCCCCAGACTTAGTTATCTGCCAAGACCAGGCAACATTTTGTA-----ACCTCCAAATGTATCGAAACACAG--AACATTTGTTGGCTCTTTGTGAACAGAATGTCTTTGTCAAAATTTTCAGTTTGAACAAATGTTGCAAAGTGGTCCAGACTAG-----ATTTGTCCCAGGAGAAACTGACACAAAGTCCTTCAGGACAGGGGCAGCCACCTCAGCTACATTGCTGGGATTGCC-GGTGATAGGATTAAAGGAGCTAGACAGTGGCATTGTGACCTAATGT-AACTCTCAAATCTGTTGCACGCAGAG chr4 - 94230402 17578411 17578410 17578832 76651571 76651570 76651992 422 GGAAGGGCACTGAGTACTACTGTAGGATCTTTTTTTTTTTTTTTGCTGACTCAGTGAAGA--CACATTTGTCATTCAAAGCCAAATTAGAAAAGGGCACGGATCATGCTACACAGATGCTCAGTCTCAGTTATCAGGCAGGTACAGGCAGCTTCCAACACATCTACCTCCAAGTGCAACTAAAAAAAGGCAATCTCTTTTGG-TGGATGTGGACAGAATGTCTTTGTCAAAATTT-CAGTTTGAGCAAATACTGCAAAGCGGTTTAGCACGGGGAGGATTTGTTCCTGCAGAAATTGACACAAATTCCTTTAGGACAGGGGCAGCCACCCCAACTGCACAGCTCGGATTGCCAGGAGATAGAATTAGGGAAACTGGAAGATAACACTGTGGCCTAATGTAAACTCTTAAATCTGCTGTAAACAGAG ..:...x...xx...x...:..x...:.x.:x.:::..x.----.....x...xx.....--........:....x....x.......-..x......:..x.::::...::::.:.x.:...x..:.......x.x..:.xx......:.x.::x::.-----........:..:.x.x...x.x..--..:x.:.x....-.xxx....:.......................-........:.....::.......:...::..xx::.-----......:..x.x.....:.........x.....:..................:..:..:..:x...x........-..x.....:....::.:.:..:..x::.::..:....:........-......:.......:..:.x:..... 40M4I16M2D26M1I70M5I24M2I12M1D32M1D36M5I75M1I46M1I26M 299/403 74.2% 422/94230402 0.0% 23/403 5.7% 6292567 NA +120087 chr4 + 190214555 23873666 23873665 23877165 3500 TTTCATTATTTCCTAATGCTCTAGTAATACATTAAGAGTTAACTGGGGTGAAAAGGCAACAAGAAAGCTTGCCAGAGTATAGTTAGAGAATTTCATGACAATTAGCACTGATTTGCACTACAAGAATAGAAAGAAAAAAAAAGAAGTTTTAAAGGGGAAAAAAAGCTACTCACACATACACAACCCAAAAAGAGCCTCCAAGTACTAGCTGAAAATGATACCGTTAGATGACAGCAGAAACACACCAGATTAGCCAATTAGCATTCACCCGAGAAAAGCTAGTGCTTTG-------------------GAGGGAGGGGAGAAA-AGGAACCCATCAACAGTAATATCAACTTTACA-----ATAGCCTT---GACTGGTTATCTACCCAAAGGAAATGCTACCTCCTCACTTTTCTGTGAACCTCTCAACAATTCTGGGGGAAAAAATGTTAGTTCAACATTATCGCAAGCCAGAATATGACTCTATTTATGTGACAGGTTGACAACATACAATTTCATGCTTGTTGAACTGATCGGTGTTACATATTCACTGTGAATATTATGAAGCTTCACCATTATAAATATGAAACAGTATACACTTATTCAAAGTAACTCCAGAAGTGGCAATTTATAGCTTGGTTGTTTGTGTTCTGATGAAGTCCAAATGCCACCTTAAGAAGCTGCAGCTCGCAGAAACAGATGTGCAGTGTGACTGCGACCAAAATGGATTGACGATGACCTATGTGAAAGCAGGCTATTACATTTTGGTCTGCATGGCAGCTGACACTGGTTTGTATTTAGATATGTGACTCTTGGGAACACTGTGT----------CCTTAAAGCTCTGTTTAAACATGGGCCAAGACATTTGTCTATTGGACTAATTATTTTACCACCCTTCTATGGCAAAGATCACT-TTTTTCCCCCTAAAAAAAAAAAAAGGATATGAGAGAGTGTATATGCACATACACAGGCACACACTCTCACTACGCTTTGTAAAATTACAGCAAGGACTTTAAACCTTGGTCATGTCAGGTGAATGTTGGCAAGATTTCCAGAATGTCTGCATAGCAGGATTGTAC-------------CACTTTCTTGATCAGGTGCCTGAGAACAGGAC---AAGACCACAAACCATCAAATCATAAGCTGTCACAGCAACTGCTTTTG----GTCAAGTTTTTTCCTCC------TCTTCCCTACCTCCTCCCTTTCTTTCTCTTAGCAAGCTTCAACCAATTTACAAGTGTTCGCTTCCACAAGGACAAA-------TTTGGAAGAGTGAAGAACAACACAATTTATCCAAATGTGGGATGAAATGAAGGAACCAG--GCACCTTGCTAAAGCTAGATATCAAAAATTTGCATAAGTAGTTTTGCAACCACAGAGGTGCTATTTGGAACAAAATAAATTGCTTGTATTGTATGCAAGGGTACAAACCTTGACCAACTTTGCGGTGTCTTCCCTGCT----------TGTACATTTCTTAAGCA---CATCCAGATAT------------------TCCTACT---------AAGAAGTTCAAGTTAGTATCCCTCAATAGGGAGACCTAAAAAGATAATTGTTTGTGGACTTAGAAGTCCTCAACATCTTTATTTGAGAATTAAGAAACATCAGTCCAAAATATTTGAAATATAGAATTAGTTCTCCAGGATGTTCTTGTAATTCTTTTGTTTCTTTTTTGTTTATTTGCTTAATATTAGGTCATATCCCTAGCTCTTTTTTTGAGATCCAGCACAGAAGTCAGTGACTGGAATCCTGGCTCTCTTCTGAAACATTTGAATTACAGTGTTTTGGAATTTCCTATTCTAACAAAGTTTGTTATCC-AAACCTGTATC-----TCTTTCTACTTTTCCTGTTGGGCTAAAGTGAAGGTGTTGTCGGTCTGTCTAGTAAATCCAACCTACGAGATAACATAATCACATACATTCATTTCTCAGGGACCTTGGCGGCTCTTATCTCCTTGCTTTTATGATCTCTTATGAACAGCCCGGAATAGCAATTTGCAGC-CTGTTTGTAAAGCCATCTTAGTCTGAACCCAGCCTTCTTCTCTTTTATCACCCAGCGATATTCTT--CAGCTAAATCCCATTCGCCACAGCAAAATTT-GCTCTGAGATCCATTTTAGAATAATATAAGTATT------CTCTGTGTGTATGGAACATATCAAACACGTAATGGAGGGTAATTATCATTTCAATGAACTATTTATT--AATAGAAG-----ATGTTTTGTGTGCTTTGC-------TTAGATTTATTGCTATGCTGCCCACTGTACATTGTAGCTTGAAGCTATTTAGTTCACGTTCATCAGCCTCTCAGGCAAGCAGCTCTGCTGTTCACACAGTTTTGGTTTTTCTATGTGCTTTTTTCAACTTTATTTTACCATTATATCACCTAGAACATTAAACACAATGCTCAAGTTCCACGTGTTAAATCACAATTGCTTTCTACTAAA-GTTCCAAGCTACCCATTTTTATTAACAGTTACTTTATTAAATCCTTAATAACACAGATAGCATAGTTAGTTAATTTGTGTGTTGAGCCATGGATGTTAATTTGTAAACATAATAACATACTGCAATCATTTGCATAATAGCATTTTAATCTTTTTAGTAAAAGCTGTAATTCCCTACAAAGTACACTGCAGTAGAAACTAAGTGACTATTGGTAATAATACAAAAGGCCTTAAAATTCTGATCCTATTATAGTGCTGGAGCATACCCAAACTGCTTCCATAATCTCTGAAATGTTACTGTTCTCTGATTTAGGTGTCTGTGTCAAGAATAAAAATGAAGTATAACTGGTAGCAGTAGACTATTTCCTAAATGTAATTTAGTATTCACTAAGCACCAGCATTTTGCAAATAGCTCTGAGGCTTTCCTTCAAAGTTCAGAGCTCCAGCTATGCATATTGTGTGAGGAGGACCCTGGAACTCACTCTCA-ACT---CTGTGCTGAAGAGAGGGCTCTGATAAATCATGCTGATTTGGCGCAGGGAAGGGCATCGGCCACCAGGGATTTGACTACTGAGTCTCCTTCCTCCTCTCTGCCCTACCAGCCTGATTGCTCCTCCTTGAACTGACGGTTTCTGAGCAGAAGTTCAGAAAAGAATGAAAAAGTGCAGTGAAGCTTTAAAAAAGCTAGTTTAAAAAAACTCAATGGGGGCTCACTCCCTCTACAGCCCATTAACACCCATTGTAAGACTGCTCCCCACCCTAACCCCCAAAAAAAGAAAAGGAGAAAGAAAAAAAAAAGTAGTTGTTT--AAGTCAGGCCAAGTCATTTTATGCAAGATCTGGTAATTCATTAATCCATCTGGCTGCAAACCTTGAATGAATAACTTGCAGTAGTAATGGAGATGGGCAGGTCTACAAAATATTAGTGTTTAGAATCTGAAACTGTGCAAATCACTCCATCATTTTGGAAAAGAAAAGGCACAAAAGTATCTTCTA------TCATCACTTTGGGACAAATGGCTT--AATGGATAAGAAGTCATTTAGCTTCAAACAACTCTGCCATTGCCAAGAATAAGAGTGT--GTATTTCATTGTGGATCTCTCTCCCCTTTTCCCTGCTCTCATTCTAGCTAC chr4 - 94230402 17583916 17583915 17587232 76643171 76643170 76646487 3317 TTTGATCATTCTGTAATGGCATGGGCTTGAGTTAAT-GCTAAGTGGGATGGGGCAGCAGGAGAAGAGCATGCCAGGGTTAAGATGGAGTGTTTAGTAGCAATTAGCAATGATGCACAGTACAAAAATAGCAACaataaaaaa-------taaaaataaaaaGAGGTTAC--------------------------------------ACTAGAAATAAAACCATTAAGGGAAAT---AAATTTAACAGTTTGGCCAATTAACATTTCTTTAAGAAAGGCAAACTTTCTGTTGCTGTTGTGAAGCAAATGGGGAAGGAGAAAAACAGGAAGGCTCCATCGAAAATATTTACTTCACACCAGCAAAGCCTCAGCGAGCGCTTTTCCAACAAAAGGCAGAGCCACCATCCCACTTTTTGGTGACCCCCTCTGCAGTTCTGGGGAGAAAATATTTAGTTGAACATTATCGTAAGCCAGAATATGGCTCTATTTATGTGACAAGCTGACAACATACAATTTCATGCTTGTTGAACTGATCTGTGTTATATATTCACTGCGAATATTATGAAGCCTCACCATTATAAATATGAAACTGTATACACTTATTCAAAATAACTCCTGCAGTAGCAATTTATAGCTTGGTTGTTCGCGTGCATATGAAGTCCAAATGCTACCTTAAAAAGCTGCATCTCACTAAAACAGATGTGGAGTGTGACTGTGACCAAAGTGGATTTAAGATGACCTCTGTGAAAGGAGGCTATTACATTTTTGTCTGCATGGCAGCTGACACCAGTTTGTATTTAGATATGTAGCCAGTGGGAACACAGTGTAACACAGTGTCCTTAAGGGCTCGTTTTAACATGGGCCAAGACATTCGTCTAATGACCTAATTAGCTTACTACTGTTCTGCTG-----AGCGCTATGCCTCCCTCTGCAAAAAGGA--------------------------------CAGGTACTCA----------GCTGAGTGCAGACACGGCA-GCATCTGAAGCCTCGGCTGCTGCAGGTGAATTCCTGGCAGAGCAGTGAAATATCTCCTTAATGGGACTGTGGAGAAGATCAGTTGCATTTTCCTGATCACACGCCTGGGGAATGGTCTTGGTGGCCTCATAC-ATCAAACAATAAGCTCTCAAAGCAATTGTTTTTTTGTTGTTGTTGTTGTTCATTTGGGAGTTCTTTCCTGCCT-------------------GAAGGTTCCAACCAATGTGTGAG-GTTC--TTGCACAAAAATAGAGGCAAGTTTTGACAGTCTG----------CAGTTTGTCCAATCAGGAAAAAAAAAGAAAGGAAGAGCAGCAC---------ACTCAATATAGGACATTTGCATAATTTTTTTTCCAATTACGTAGCAGCTGGATTGAGTGAAATAAACTCCATTTACTG-----------------CTTGAGCA-TTTTAAAATGTCAGCACAGCCAGCCACAGACTGTAGTTTACATACACCTTCCACACAGACGTAATGCCATTGGACTGGGCTCCTATTTAGTATGGGCAGAAATCTGAGTCAG--------GCCAGAGGCATTTGCAAAGGTAACG------------------------------CATTCAAATGCTATGAAACCTGACACTGCTCTGTTAGGAATATAAAA---------------ATTCTTGC---TCTTTTGCCCAGCCTCTG------------ATATT---------------TTCTTCCCCTG------------GAATTGAGGGTCT----TCCTCCTACTCTCAAGAGCTGTTTTCATGATACACTCTTACCTTTTATTGTTCTTACAAAGTTTCCTATCCCGAATCTGCATCATCAGCCTTATGATGTTTATTTTTGTTTTAAACCTACAATGTTGTCTGTTTCCCTATTAAACCTATCCT--GTAACCACATACT---GTACATTCATTTCTCTGGGACCTCGGTAGCTCTTATCTGTTTGCTTTTATGATCTCTTATGAAGTGCTAGGAATAGCAATTTGCAGTGCTGTTTGTAAAGTCATCTCAGTCTGAACTC---CTTCCCCTTTTTTGTCATACAGCGATACTCTCAGCGGTGAAATCCCATTTGCCTTAGAAGAATTTCATTACAGGATGCACTTTGGAGGGACACAAGTTCTGAAGTATCCTGTATGTGCTTATCATGTAAAACATTTAATATGCATTAATCAGCACTGCAAAAAACGACTTACTGGAGCAGCAGCCTACACGTTG-GTATGTCCTGCGGTACCTTCTGACTCACTGATG-GCTGCCCGCTCCATGTTACTGCCCAGAGCTATTTAGTGTCTTTTCTCTGAGGCCATAGACATGCTGCTATGCTGTTCGCACAACCTCAGTTCTTTTAAGCACTTTGATAAGCTTTATTCTGCCATTATACCATCTATGCCATTAAACACAATGTTTAAGTTCTA--TGTTAAATCACAATCAGTTCCTATTAACTGTTCCAAGCTCCTCATTTTTATCAACAGTTACTTTATTAAATCCTTAATAATATAGATGGAATAGTTAGTTAATTTGTGTGTTGAGCCATGGATGTTAATTTGTAAACATAATAACATACTGCAATCATTTGCATAATAGCATTTTAATCTTTTTAGTAAAAGCTGTAATTCCCTACAAAGTACGCTGCAGAAGAAACTAAGTGACTATTGGTAATAATAAAAAAGGCCTTAAAATTCTGATCCTATTATAGTGTTGGAACATACCCAAACTGCTACCATAATCTCTGAAATGTTACTGTTCTCTGATTTAGGTGTCTGTGTCAAGAATAAAAATGAAGTATAACTGGTAGCAGTAGACTATTTCCTAAATGTAATTTAGTATTCACTAAGCACCAGCACTTTGCAAATAGCTCTGAGGCTTTCCTTCAAAGTTCAGAGCTCTAGTTATGCATATTGTGTGAGGTACACCGCGCAGCTCACCTCCAGACTTTGTTGTGCTGAATAGATGGCTATGATAAATCATGCTGATTTG--GCATTGAAGGGCATCAGCCATCAAGGGTTTGACTACTATGTCTTTTTGTCCC---CTGA-----------GATTGTATCTCCTTGAACTGCCTGCCCTGGGCTACTAGTTCTGGAGAAAATTAAAAAGTGGAAAAAATGCTAGGAGAGGCCAGTACAGAAAA--TCTATACAGGCTCAGTTCTCTGGAAACCCATTAACACCAGTCACAAGACTG---------------------------------GCAAAGAAAACATTGGTCGTTGTTTAAAAGTCAGGCCAAGTCATTTTACGCAAGATCTGGTAATTCATTAATCAATCTGGCTGCAAACCTTGAATGAATAACCTGAAATAGTAAAAGAGACTGGCAGCATCACAGAGTGTAAG-----AGACTCT---ACAGCGCGAACCGTGCAATTATCCTGGTGACGTTTAGG------GCTCCCCTCTACAATCCTCATCCTCCTGATGCAAACTCTTCCAAGTAGATAAGAAATCAGTAATCCCTATG-AATTTTCCTGCTGCTGGGACTAAGAGAGTAGGCACTTCATCGTGAATC----------TTTCTCTGCTCATATTCTCACTGC ...x..:...::x.....x:x.:.xxx.:x:....x-.:...x....:..:::x:...:x.::.:...x......:..xx..x.:...x:...x:.::.........x....x::..x.....:.....x..x..x......-------....::x:....:.:.:...--------------------------------------:..::....:.x...:...::x..x.x---...:x:.x...x..:........:....:x::::.....:..x.::x:.:..-------------------.:..:...:..:...-.....xx.x:..x.::x.....:x....:...-----.x.....:---..x:.x..x..:.x.x.....x.:x..:...x:.:.......:x....x..:...x:..:........::....xxx......x..........:.............:................:.:...................................x......:..........:..............:.....................x.................:.......x.x...:.....................:.:..x.xx...............:.......:........x...:.x:...........x..........:.......:......x.x........x........x...............x....................::..................::.:xx.........x....----------......:.x:::....x..................:.....x..:x.......x:....:..:x....::x.-----.x.:..-.x::....:..:x.....::.--------------------------------....:..x..----------...xx..:x.:x:..:...-.x.::.x..:...:..::::xx.........x::x.xx...x:xx:::...:...x.x..:::...:...:x-------------..:....:......x::.....:.:.xx..x.---:x.:..x..x..-......:x.......x...x.....:..:....x----..::xxx..x...x.::------....:...:...-------------------.x.:.:.:........x.:::..-....--..x.....::.:.:.-------....:x..xx..----------..:...:.....x::x.::.x:...x...:.:.xx..--....---------:..x:....x::.x..........x.xx....x...::..:x..xx...:xx.x..:::.......:.x.x.x..:..-----------------.....x..-:...:x::....xx.x.x..:----------....xx..x.x..x:.x---..:x....::.------------------.....:.---------x....:.:::...:..--------:x:..:.:x.::.:x....:...:x------------------------------:...::.:x::..x.....x.x.xx.::xxx.:..x.:......:..---------------:......:---.......:::xx::.:..------------.....---------------:....::::..------------...x.x..x.x..----....xx:x....:xx..:x::...xx..x.:.xxx.:..:xxx...x:.:....x.........x:.....-:..:...:...-----:...x:x.:x...x:.x...xx:....x:x.x::.......x..:.x:...x....:.:.x...--.x:.:x.....x.---:..............x.......:..::..........x:.......................xx..:x.................:-............:.....:.........:.---....::..:....:...:x........:...:--.:.:x..........:...x:..x.:.....-::.x:::...x..:...:..:x:.:.:....x:.------::....:...::xx.x...:.x.....:x....:x:x:x....:.x..:.x...x:...x.:...:.--.::..x..-----.:...x-..:..:::...-------.:x..:.:.:..x.:-.......:..x:.::..::x..::::...........x:x:x...x::::xx:.x:..:..x..x...x........:....:::.::...:..:..x.::....xx.x.:.......:.:........:..:...x:x..............:.:......:.--..............::x..:...:...x-..........x.:.........:............................:.:....:.x...........................................................................................................................:......x............................x.................................:....:...............x...........................................................................................................................:..........................................:..:..................x:x...x:.x.:.....:::..-...---:.........x...x....x....................--...xx..........:....:..:..:..........:x....::..x::..---...x-----------.....:x:............x.x.::::x.:x:.xx.....x.:.:.:...x........x.:x:..xx:.x::.:.:..:...x:.:....--..x..:x:......x.:.:::x:x.:............x:.:::.......---------------------------------.x..::....x.xx:..x.......--.....................:........................x............................:..x.:......x:....:x.....xx::...:.:.:.x..-----...x...---..x.:..:..:.::x.x..:..::...x:.x.xxx...------:x.x:.:....------.....x:::..:x:....:xx:.:--.:.:........:...x.x.x.:::.x:-..:.:.x.:::...:::..x......x..--.:.:.....:...:...----------....:......x:.....x:..:. 36M1D105M7D20M38D27M3D52M19I15M1I32M5I8M3I455M10I72M5D6M1I21M32D10M10D19M1D72M13I32M3I12M1D34M4I17M6I12M19D23M1D4M2D15M7I12M10D37M2I4M9D78M17D8M1D21M10I17M3I11M18I7M9I16M8D25M30D47M15D8M3D18M12D5M15D11M12D13M4D71M1I11M5I64M2D13M3D87M1I30M3D32M2I31M1I34M6I67M2I8M5I6M1D11M7I15M1D164M2D28M1I486M1I3M3I40M2D52M3D4M11D92M2D51M33D25M2I116M5D7M3D38M6D11M6I24M2I28M1D29M2I17M10D24M 2331/3156 73.9% 3317/94230402 0.0% 505/3156 16.0% 6289750 NA +17339 chr4 + 190214555 23884746 23884745 23885062 317 CCTTACCTCAAATATGTTTGAAGGCTCATTGTTGTACTGATTGGATATTATTTCTGATTGGTCACTGCACCACTTGAGTCCACCCAGAAAGCTGTCTGTATCCAAGTCGTTCACATCTAGTTCAGAAAGATCAAGTTCAGGAAGATCTGGGCAAAGAGGCTGGTCTTCACCAACCAGAGCAGCACACTGCAGGAGGCAGAAAAAAAAAATTTAAAAAAGCTTCCATTAACCA-CAGGAATTTATTAAACTGCAATAGCATGTGATAGGAATTAAGCCTAGTTAATTCAACTACA--------CTACCAAAGCTAGTTTCTGGCACT chr4 - 94230402 17591609 17591608 17591923 76638480 76638479 76638794 315 CCTTACCTCAAAGATGTTGGCAGGCTCATTGCTGTACTGGCTGGAGATGACCTCAGACTGGTCGCTGTACCACTTGAGCCCCCCCAGGAAGCTGTCTGCATCCAGGTCGTTCACGTCTAGTTCGGAGAGGTCAAGTTCTGGGAGGTCTGGGCAGAGAGGCTGGTCTTCACCAACCAGAGCAGCACACTGCAGGAAACAG-------CAATGTAGAAACAGTTTCATTAATTGCCAAGAATCTATT-AACTTTAATATCATGTGATAAGAATTAAGCCTCG---ATTAAGCTATAGCACAGGGTCACTAGAATTGTTTTCTGAAATT ............x.....x.x..........:.......::....x..x.::..x..:.....:...:..........:..x.....:..........:.....:.........:........:..:..:........x..:..:........:........................................::...-------x...x..:...x:x..:......:::-..:....:....-....x:....x.........:...........x.---...x.:...:.--------::..:.:.::.:x......:x.:. 199M7D26M1I12M1D34M3D11M8I24M 246/306 80.4% 315/94230402 0.0% 20/306 6.5% 6293137 NA +127961 chr4 + 190214555 23887232 23887231 23892250 5019 ATGTTATGGTTGAGA-AAAGTGCATGTGTTCTTGCCAATGTTGACATGCTAATAAAATCTGTGCTTCTGAATGTGGCATTATCCTGCTAATCTAAAACACATTAGTGGTAGCAAGTGTTCCTGTTATTAATTTATATTTGGCCTTTGGACAATGCCAGACTTAACAGTCCAAGCCCTGTAACTGTCCTCATCTGACATGCTGATATTTACTGTTTCCCTATACCTCTGTAACAGGTGTGCTT-TATTGCAATTACACAGACACATTCTACTGCCTC--TTTGCAACTATGACAGCTATTTCACAACTGTAGCCTCAATTTTATAATAAGATTTAAGAGGATAAAGCAGTCACTAAACACAAAAGGCTAATTATTGTATGTTATTTCACCCCAACAGACTTTT----CTCTTAGTTAAGGAGCAGACAATAAATTAGCTTAACTGCACTGATGATAATGAATCATTATAATTAAGTATAATTCTCCATTAACCTTTTGGAGGTTTTT------GTGCCATTGATGGTAAATTTTAAAGAGAGAGAGAGAAG------------------------------AAGGAGTGGACTTG-GCCACATTAATTATATTAATGAAAAAAGAAACTGGGTTC---TTAAAAAAATTAGTTAAGACAGGGGAAAGGGGGTGGAGAGAGGGGCAGTAAAGAATGACAGTCTTAGTGGGGTGTATGTCATGTGAATTGTCTCTATCAATCTTAGTAACCTTACTGTATATCACCTTCATTAAACTGTGAAACACGGGGCACTCCAAGTAGCTATAGTGATATAGGCCTATATTAACCAATGTACTACCCTGTCATTATGTGCAAAAGGGCATAATACGTTTTAGGATGACAGCAAACATTAATGATTCAAAAAATGAAAACTGCCAACGCTACCTGCTGCTCGTAATATTTTATACAGGCGGAGGTGATTCCCAGAGCCGCTGCCATGTAGGCAAAGCTTCTAGCAGCTAGCTGCCTATAGTGCAACAGAGAAGTGACTGGCCAATCTCAGCCGACTGGCGAC--TCTATCCATGGCTGGACAAGTA--GCCAAGACC------------------------------TTTCCTCCTTAAGAAAAAAATTTAAAGGCCACTATTCTAAATG----CTTCTGATGTTTATTTGAAAATGACTGCAGGAATTCCAATGATTAAAATAAATCTTCCTTATTTCCATATGATCTAGTTCCTCAATCAACTCCTAACAGCATCAGGAATAATACATGATGGAAAAATGAAACTACAGCAGCTGAGACCCACAGTGCCAGCCAGACAACCACCCACAGGACACTCCGGCTACTCAAAGGCAATTAGGACTTTGAAG------------CCACTTATAACCCTGACTCATAATGGCTACAGGGCATATGAATTATCCATATCTATTCCGCCTTACCAAGAAATCAGAACAAGATAA---CAATTACAATCCACAAATACGATCTACCAAGGCAAGGGAGGGCAAATGGAGCCAACATTTGCAAACCCAGCAAAGAG--TTAAGAATCC-CGGGCATGCCTCGCTAGATAGGAAAAATGCATTCACAGACGGCCTTGGCCAAATTATTTTCACTTTAGATGTGTATCGCTGCACCACATGGACATCTTATTTAATCAAATCA-CGTGTGG-GCTTGATCCTCCCCCTTACCCTACGTGCCCCCAGCTACCCAGAGGAAACACTCGCAGTCTTTTGCCAGATTCATTGTTAGCAGCTG---GGATCCTCCATGCAATTC---AATTCGAGTCCATCTCACCAGAGTCCACAGAAAGTTTTGCTTGTTTCCCAAGTTGCCCAAACTTTCCTTCCGAGAGCATTCCATTGTGCTGAATGCAAACACGCCGAGGTCCTCCGTCCCCCCACTAGACTCCAGAGATTACGAGGAAACTGCTTGC--------------GTTATTTTCCCCCCTGTATGAATTGTAGCCAGCAGAGACTGTGGAATTGATGTATTGCTGTCTATTTTTACACTAGCAGCG-----------------AGCAGCTCCACACACAGTCCTGCATAAACTCTATTCTCTCTCAGCTTCAGGCAGCTCTCCGTGGTACAGGAAGATTTAACCATTGGCTTCCCTGCCACCGACGCGAACGGAAAACCTTGCACTGCCAGGCGTTTCTTTTTATTCGCTGGCCAAATCTTTCA--ACCACGTATAGGAGTTTTAAAGGAAGCAGCATCGTTGTTTTGTGTTCTGTGGGAAAAGCAATCTAAAATAGCCCAGCAGGAT---------TATTTAGGATTTTGTAAGTTCTCTGTCTGATGAACAGAGAGAGAGGGGGGAAAAATC--CGGACTAGAGTCAAA----------------------ACGGACTATATTTGAAC----ACATCCATTTTAATATTTTTATCTTC-------------------------------GTCTTATTATAAATAGAAATGGCATTTTTCCAACCAGGCCACTAAACACCACTGGAAAGACTTCAGCTTCTGATTCATATCAATATCTTAGAGCATAAATATTGCATATGA-GTAGAAACAGTGCCAAAGTCACATGGAAAGAGTTTCTAACTGCAACAGATACTGATGACAGCAGCTAAGCTTTGATTTGCTCAAGCCATCTCAGAGCCACCTTAAAATAGCAAACTTATTGGAGTTAAGATAAGATTGAGATTCTTCTAAAAGCTCCTGCCTGGACTACTTTCCTGGCTCCTCTCTTTGCCCAAGCCCATCCCCCCTTACAGGAATAATAGCATCTGAGGGAAGCGTCAGTTGTGGCTGCAGCGCCGAGCCCTGCCCCAGCTCACCTCGATGTCACTCCATACAGACTCAGAGTCCTGGTTGCACATGTCCCACGCCATCCAGCTCCTGAATGACGCCAGTCAAGCTTTTTCAACTCCAATCCACAGT--GACACAGAGCACACACTCATGCAGGCAACCAGCCCCTTACTGAGAGTGAACTGAAGGCACCTGTCTTACTACAGTCCCCAGTCACATGACAAAGCTATTAAAAAGTAGGCTGGGCTGTCACTCACCCAGCCTCCCTTCCCCTGTGCAGCTTGCTGCTCTAACTCGTGACGTCACTCAAAGGCAGCCCTCTGCTTCAGTGAAGTAACGCTTTAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAGAAAGAAAGGAAACACTTAGACTTTTGGAGGCTTCA--AGCATCATGCTGTGATTAAAGCCAGCTTTGAATGCCACAGACTCTAAACGGAGCCCTG---GCCATATAATAACCAAAATCCCCTGCAA----------------------TCTTTTTTTAATTTATTTTCCTTCC--------AAAACAAGCAAGTGGCAAAGCTCCCTGTTTCA--------------------TGACAGAGTAACTATATTCTTAGCTAAAACGTGTATTCCCTAAGAACTCTTTAATTCTA--------------AGATCTCCAAGTGGACTCAAGCTCAGTTTGGGACTAAAGCAAGAGC-------------TTA-TCACATGATGCATTTTTAT------GAGACATTTTCTCATTGAGGGAGTGTTTGAAAGCGCAAACGGGGCTTTTTTTTTTTTTTTTTTTTTTTTTGCTTGTTTAATCAACAAAATAGCCTGTATGTGTTAAGGT------------ATAAACAAACTCCTCCACCCAGAATTCGGCTGCCCCCATGGCAGTAGGGAATACCAGCTCCCGAAGAGTTGCTGCAGTTTTCT---TTGCTCCATATAAGGAG-----------AACAAGCCACAAAACCCCATCCTTTCAGCTTCCTTCTAATTATTTCCATTTCTCTCATAGGCTCCCAGAAAACAAGTGTTAGTAAATACAGTCGCTGCTGCTCTGCTCAGATCAGCTTTGATTCCCGGCTCCTATTTTTCATACATGTAGCGTTTCCTCCCTAACTGCCTTAG-GGTGCCTTTTTGAATAAACATTGAATTCCAACCCTAGTGCCCTGGGTTGTGTAGTTTGCGTTTTGAAATCAAGAATGTCTGTGAACTGAGGGAAAA-------ATACCAACACACTATTAGCAGAAATATTCAATTCCTGAGCTTTACTTTCTATTATTTTTCAGCTTGTACCTTGAGACAATGAGGGCTAATGCAGGTAGGTGCAACTGTTTTATGATGACACTACATATTGAATACATAACAAACTCAAGGTACTGGACACAGTGGAAAAACACTTCCTGTAACATGACAG-----------------TGGTCTGACTTAACC------CTTCCAAGTTCCCAGGAGATGTACACGTGTATGTATCTGTGTGAATAAACATGTTTTCATAAAATGTTAAACCCAATATACTTTTAGAATCAGCTCAATTCTTTTACTTGATAATAATTTACCTGAAAACAATCCCCCAGTTACCTAAATATAATTTGTAAAGCATTATTCTACTGAGGTTAATTTACACTGTTCTTCATTGTCCATCTCCTTAAACAGAAAAACATGGTTATTTGC---CCTAACACATATTTTAAATATTAAATT-GCTCAAATATTAAAG-------------------TGAAAGAAAGAACAAAAGAAACAAAATACCAGCAGACTGCT-------GCTTCTTTCAGACCATACATATTATAAGAGATTTGTGTGCTGTGAGAGCTGCAACAAGTTGCTAGTAAATTCCCAAATAATGTAAGGAAGTTGACAGTTTATCATTACTGGGCATAAAAAGGTGGCCAAGAGCTTTGACATTT----TAAGTTTGCTGAATACAGTTCACCAGCACATTTTC-CCTTTTATAAACAGCAGAAA----ATTACTGTAGTTTTAATTTTCTAATGAAAG-AACAGGAAAAT-----ACAACCTCGGGAATGCTTTTATACAAGC-----AATTAGTGGCATTACTCTGCACTCCCCACAAAGAAACACTAATTTTCTTCCCAATTATATTCTGATTTAATG-TAAAACTTCAGTAAATTATTAAAATTCAGGACAAAGGTCATTGGCTCTGCCCTC--AAGGATCAACTGTGAAATAATATTGGTCACCTGGC-----CAAGAAGAGTCAATGTTTATTAATTATTATCATGTGATTCTT--CCATTGTGATATT---CACTGATACCT--TTAT--TTGTGTTTATCCAATGCTAGATATTCATCATATTTTT-----------------AAAACCTATTCACATCTTTTAGAGATGT-TCTTTACATTAGAACAGGCT-CGTTATAATTTTTGATATTCTAACCTGCCCAGATTGTATTGTTAGGGTTTTCTTATTTTTTGCCATCTAATTCTACTTCTAAAAAATCAAATCAGCACATGCACTGA chr4 - 94230402 17598128 17598127 17603089 76627314 76627313 76632275 4962 ATGCAATTGCTGAAATGAAGTATATATGCTCTTGCCAATGTTGACATGATAATAAAATCAATGTTTCTGAATATGACATTATGTTTCTAATCTGAGACACATTAGC---AGCAAGTGTTCCTGTTATTAATTTATATTTGGCCTTTGGATGATGCCAGATTTAACGCTCCAAGTCCTGAAACTGTCCTTATCTGACATGCTGATATTTACTGTTTGC-TATACATCTGTAACAGGTGCACCTGCATCGCCACAACACA-ACCTACTGTATTCCCACCGTTACTGGATACCATGGTTATTCCGTAACCACAGCCTTAATTTCAGAGTAACACTTAGGAGGATAAAGCAGTCACTAAACACAAAAGGCTAATTACTGTGCGTTATTTCACTCCAACCGACTTTTTTCCCTCTTAGTTCAGACGCAAACAATAAATTAGCTTAACTGCAATGATGATAATGAATCATTATAATTAAGTATAATTCTCCATTAACCTTTTGGACATTTTTTTTTTAATGCCTTTGAAGGTaaataaaaaaagaagaaagaaaaagaaaaaaaaaaaagaaaaaaaaagaaaaaaaaaGACTGGACTTGTGCCATATTCATTATATTAATGAAAAAATAATTCCGTTTTATTTTTAACAAGTTTTTCGA---AGAGCCGAGGGGGTGAACC------CAGCAAAGGAAGACAGAGTTGCTACAATGAGTGTCATGTGGGCTCTCTCTATCAATCCTTGCAACCTTACTGTACATCACCTTCATTAAACTGTGGAACACTGGGGACGCCGATCAGCTACGGCGATGCAGGCCTTTATTAAGCAGTGCGCCGTCCTGTCATTATGGGAGTGAGAATCTAATACATTTTAAGTTGACAGCAAACATTAATGATTCAAAAAATGAAAGCAGCCTCCGGTACCTGCCGCCTGCAATCTGTGAGACCGGTAAAGGTGATCCCCAGAGCCA--GCACAGCAGGCAGCACTGCT--CCACT-GCTCCAGGAAGTGCCGTGCAGGAGCACGTTGCTAAAATC------CTACCAACAGTTAACCCAGCACTGCACAATTAATATTAAGATCAAATCtttttttttttttaattcttttttttttCCCCCTCCACACTATGA---AGAAGTCATTGACATAAATTATCCATTCTGTTACTAGCTTG-AAATTACTGCAGGAACTCTAGTGATTAAAATAAATCTTCAATATTTCCATATAAGCCGGTTCCTCAATCAGCTCCTCGCAGCATTAGGAATAATACATGATGGAAAAACGAAGCTCCGGCAGCTGAGACCCACGCTACAAGCCAGACAACAACCCACAGGATACTCCAGCTACTCAGAAACAATTAGGACTCTGGAGCCAGAAAGTCATCCACTTACAGCCCTGACTCATAATAGCTACAGGACATATGAATTATCCATATCTATTCCACTTCACCAAGAAATCAAAACAAGATAAGAGCAATTACAATATGCAAACAGAA---ATCAGTGGATACAATGGCAA--GCTGCAAATATTTA-AAACACGACAAAAAGACTTAAGGACCCGCCTGCACGCTCTGCCAGATAGGAAAAACA----CACAGGAGAACGCTGTCA---CATTTTTACTTCAGATGGGTAT--CTGCCTGGCATGGACATCTTATTTAA--AAGGCACCGCATGGAACCTGTTTCTCTC--------------TCCCCTGTTGCCCAGGGGGAGCATTACCAGCATT------GATACACTCGCAGCGGCAGGTCGGCTCCTCCG-GCAGCTCTGGGTTTTGCCTTCCTCTCGACGGGGTCCACACAAAGTTTGCCTCGCTTCCCAAGTTGCCCAAACT----TCCAGGTAAGGCTCCATTCTGCCCAACGCAACCGTGCAGAAATCCTCACACCTCACTTCATCCTCCAGAGATTACCAGGGAGCTGCTTGCTTTTTGCTTTTTTTTTTTTTTTTCCCCCTGTATGAATTGTAGCCAGCAGAAGCTGTGGGTTTGATGTATTGCCGTCTATTTTTACACAagcagcagcggcggcagcggcagcagcagcagTTCACACAGTCCTGCATAAACTCTATTCTCACGGTTCCTCCTGTTG-TCTCTGCTGTACAGTGGGATTTAACCATTTGCTCGACTG---CTTGTGCGGACTGAGAGCCCTGCCCTACAGGGCACAGCT--------ACAGGGTGATTATTCCAGCACCACG---AGAAGC----AGGAAAACAGCTACTTCCAGAAATCCCCTTT---AAAAGC-ATCTAAAGCAAAACACCGGGGTGTTCGTTCCCGTGTGGGGGTTTG--AATCCTGCAGCTGATAAACA-------AGGAGGAAACCTTCAACAGAGCAGAGTGAAACAAGCAAGGAAAATAGGAAGCCACTGGTTA-ATTTTAACTACTACATCttttcctttttttttttcttttctttctttttGTGGAAAAAAAGAAACGTTAATCTCATTCTAAATAAACATGGCATTTTTCCAACCAGGCCACCGAATGCCACTGGAAAGACTTCAGACACTGATTCATATCAATATCTTAGAGCATAAATATTGCATATGACGGGGAAAGCGAGCCAGAGGCACATGAAAATAGTTTCCAACTGCAGGAGATACTGATGACAGGAGCTAAGCTTTGATTTGCTCAAGGCATCGCAGAGTAACCTTAAAATAGCAAACTTAGTGGAGTTCAGATAAGATCCAGACTTGTTT---------------------------------------------------------------------------------------GCAAAGTGCGCCCGCAGCCCCTCTCCCGCGCCCCGCTCACCTCGATGTCACTCCATA------CAGAGTCCTGGTTGCACATGTCCCACGCCATCCAGCTCCCGAACCGCAGCGGTGCCGCTCGCGAGGCG-CAATCCAGAGCCGGGCAGGGAGCACACACGCATGCA-GCAACGAGACCCTTTCTGAGAGTGAACTGAAGGCACCTGTCTTACTACTGGTCCCCGTCACATGACAAAGCTATTAAAAAGTAGGCTGGGCTGTCACTCATCCAGCCT------TCTTGTGC----CGCCGCTCCAGC-CGTGACGTCGCTCAGAGGCAGACCCAGGCTG-AGCGAAGTAAATCTTTTTAAA---------------------------------------AGCCACTCAGACCTTT-GAGTCTCCAGCAGCACCACGCTGTGATTAAAATCACATTGCCACGCCACACCCCCGAGATCGGGCACTGCCTGCCACGGAACAGCTCCCGACCCTCACAGCCTGGCTTTTCTCAATGCTTtttctttcttttttctttctttcttCCCCCCCCCAAAAACAAACAACAGACAGAG----CTGTGTTAACGCTAAAGAAGCAGCGAGGTGACAGAG----------CCGGGCTGCAGCACGTGTGCTCGGAGCAGCCTCCAGCCTCGCGCGGCCGCAGCACAGCTCAGCAGGGAGAGGCCACCCCGGAGTTCGGCCAAAGTTACAACGCGCTCTGACATTTTATTCACTTGGGGATTTTACACCTCACAAAGTTAATTTCTCATTG-----GTAACTGCAAGCAGAGTCGG------------------------TTTTGCC------ACCAACGA----------ACGTGTTGGGGGGGGGGGGGGGGAATAAATGAA----------TAAAATTCGACT--TCCCAGGAATGGAGGAAGTATC--CATCAAAGCCATTCCTGCAGTCATCTCACCTGTGACAGCGAGGGAGCCTGACCCCACACCCAGCTACATGAGGCATTCCTCT--GCTGCTCTTTAGTCGGCTCAGTG--TCTCAGTGG-----AGGAACCCAGTGCTCCTGCATGCAACTGCC-CCATCCTGCCCAGGACTGCATGGGTTCCTGCCTGC--ATTTCCCTACAAGCA-------CTCTACTGTGGCCTGAGCCAAGCCTTTTCTCAT-TGCAAGGAG------------------GGGAAGAGAAG----------GAAAAAAAAAAAATCTCTTGTC-ACGTGAAAACCCTGACATGCAGGCACGCCGTTAACAGCAG-----AGGTTCTGGGTTTAAGCC-------CTTCGCAGCTCACCCGCTGTGACAACAGAGGCTGCTGC----AGGTGCAACTGGTTTATGGTGGCACTAC-CGCTGAACACATAACAAAGCCAAGGTACCAAACGTAACTGCAAAATGTTTCCCACAACAGGAAAAAAAAGCACACGAAGGCCTTGTCTGACTGGCCCCACCTGCCTCCGTGCTTTCTGAAG------------TTGTATTTTTTTTAATTAGC-TGGGTTCA-AAAGTCTTGCA-CAAATGTAAGTGCTGGATC---------------CGTCATGCGGGGCTACCAGTCAA---------AGTCACCAAACTATAATT----------------------GATCATCCGCCTTGTCATGAAATATTCATTTT--------------CATTGTTATTTGCAAACTTGA---GCATTCTAAAGGCTAAATGAATTCAATTATTATAGCAGGCTATGGTGATTTTGCTGAGAGAAAAAATAAATAAGA------AGCAGCACAGCTCTTGAAATAGCCTTTTTC---CCGCAGATATTAAAA-----------ACTTCAGAAATTGTTGTAAGTCTCAGATATATTCTTGGCTTATTTGTGTTCCCTTGTAATTCATTATTGCCAGTTCTGATAAAACG--CACGGTTTTCCCTGCTTGTGCTTAAGTTGCAAATCACATCACACTGTCATATTTTCACCGAGCGCAGATGACAAAAATGGCATTGTTTTTACTTTACTTAATTAAAAAAAGCCACAGCAAAATACCGAACGACAACAGAAAGCCTTTCCTACGAGTGATTAAATTAACGGTATTGCTTTGCTCTCGCGACGAAAAAAC-CTAATTTCCTTCCCAATTATATGCTGATTTAATGATAAAACTGCAGAAAATTATTAAGATCTGGGGCAAAGGTGAGTACCTCTACCCTCTGAACAGCCAGCTGTGAAATAACG-CGGGCACCTGCCTGCCTCAAGTGCACTCAGTTCTTATTAATTATTATCTGTGGATCCATGGTCGGTGGAATATTCTCCTCCAATACCTACTTATAATTGTGTTCATTGACTGTGCCGAATCCATCATCTTCTTTTCCTTTTTTTTTCTTGAAGTTTCATTCACACCTTTTATAGAAATGTATTTACACCGGAACATTTTATATTGCTGTTTTGGATATTTTGACCTGCTCATGTTG-------------TTTCTATTTTCTACATTTCCACTTCACTGCTTTCCCTTCAAATTAGCAAGTTAACTGA ...:x..x.:...:.-:....::..:..:...................x..........x:..:........:..:......x:.x.......:.:.........:---........................................::........:.....:x......:....x.........:..........................x.-.....x.............::.:.-:..:..x.:x.....-..x:.:.x..:.x..x.--..xx:::x..:x.::.:....:.::...:::.....:.....:.x.:...x.:...:.....................................:...::..........:.....x.......----.........x..:x...:......................x....................................................x:.....------:....x....x.......xxx...:::...:...:..:------------------------------..:..x........-....:...x..................x..x::x.x..:---..x..x..:..xx.::.---..:.xx:........:.xx------...:....:.x.....xx..:x.:x::..x:.........:::.x............:.x.:............:....................:.....x...x..x..:.x:.....::.:...::......x......x..:..::.:::............x.x:x:..:::x......:.....:.x.................................:.x...xx..x.......:..::.:...x.x.x.x..x..:::.......:.........:--..xxx.:.....:x:..x..--.x:..-...x.xx:x.....x:::x..:..::xx.x..:..xx..------..:x.:..--.:x.:...xx:...x....x..--:::....:.------------------------------.....:...:x.x.xx.x:.---.:.:.:..:.:x:x.....x----x.....x.::.x::...-....x..........:..:.:..................xx...........:.x.::............:.....x:......:.......................:...:..x.:...............:x.:.x...........x..........:.....:........:.::...........:..:..------------.......:.:..............:........:.........................:.:.:............:..........---..........x::....:.x:.---.:..:x.x.x:x:.x.....--.xx..x..:....:-....x.::....:..--.....:.:..-.xx...:..:::..:............::----.....:x.:x.x:x.:..---:.....:....:.....x....--....x:x:..................--..:x..-..::...-:.:..x.:...:.--------------:....x.:.:.....:..:.:..:.xx...:x..------...x..:.xx:...:..x.---..x......:-...::..---:x..:.xx.:.x....:x.:.:.......x.......xx..:.:...................----.:.x.:x.:x::......x...:x..:....x.::..x..::.....xxx..:.x.x::.xx.............x...:.:........--------------x..x....:...........................::......:x............:..............x......:-----------------......xx:x............................x.xxxx.:..xx.:x.-....:.:x......x::............x...:xx...---.:x::...:..x..:.:..:...x..:.x:...::xx..--------:.x..x::.x.x..:..--......---..:..:----.:.:..:....xx.x.:xxxxx:.x::..x.---......-.......::.:xx..x.:..:.---------::.x.:..:x....--.:.:..x::x.....:....-------...:..:..xxx..--.:..x:.....x...----------------------..x.::..-....x...----.....:x..::xx.x.....x....:-------------------------------:...:...x......:.x........................::..::..................x:x..........................................-.x:....xx.x....:..x......:...x......:.......:x...............x.......................x....x.....:x....................x.......x.........:x...:.:x.:.---------------------------------------------------------------------------------------.:x.:x..:.x.:.....x..xxx...xxx...x.......................------.......................................:...:x:.:x.:..xxx...:x:xx::.x-.......x..:--.:..x:..........x......-.....x..x.....x.................................x.x:...x............................................:.......------:.:.....----:..:....:.:.-.........:....:......x..:xx...x-..:.......xx....xx...---------------------------------------.:x....:....:...-...x..:..--....:..:............::..xx..xxx.:......xx.:.x.:.:x.:..x...---....::x..:.:.:xxx:x...:::..:----------------------.....:...xx.:.x.:..:.....--------.......:...xx.:..:..----....x.:.--------------------........----------.:x:...:x.:.::..:.x.:.x:..x.x:..::.::::::--------------..x..xx..:.x:..xx.x.x.:.:.xx.xx.:.:....:x.x.:.-------------...-....x..:x.xx...x:.:------:..x:.x..........-----..:x:..x....:x.:x...------------------------......:------.:....:.----------.:.....::..x------------.....::..----------:.:......:..--:....x.:xx.x...:.:..:.--.x:.x:.:xx:..x.......:x...---:..:xx..xxx.:....-----------.x.x...:...x:.xx.xx....:.--...x.::.:..:.::x:..x:.x--.....xx..-----..:..x.x....:.xx.:x..:..:::..:-.::::....:...:x.x..x.x.:....:.x..x.--x...:.x....x.:.-------...:x:x::x....x..-x:x.......:xx..-x:..xx..:------------------...xx.x.x..----------....xx..:..x:...x.x:x.-:x.x.....-------..:.x::...:.::...:...x.:-----.:x.:...:.:..x.x::-------:..:x.....:::x.x:..x.....::::....:x...----...........x......:..:......-:::....:..........x:........:::..::.::x.x....:::....:::....x..x.:-----------------.x........x:x..------.:...:x.:.::.x.:..------------x.....:.x.x.x...x.:.-..xx....-...:.x..:x.-.x...:..xx.x:x.:...---------------.x.x..:xx::x:....x.xx..---------...:...x..x.......----------------------.x.x..:::.x:...:x.xx.x.:.:...:.:--------------...x.........---.:.:.---::...:....x::.....x-::....x.....x..-------------------...:.....:..:...x:.:.------.x.....x.x:x..-------..:.:....---..::.x......x..-----------:..x::::.::..:x::....:x.x::..x....::::x.x..x.:x.xxxx:.x::.:..:..:...:.::.x:x.:.x..:::.--..x.:x:..:xx:::..----.x.:x....x:.x:...x:x...::x..:......-..xxx:::.:.:::..:...----...::.x.x::....x..xx:...x:....-x....x.....-----..:..xx.:.:..xx....:x...:..:-----.....::..:...:..:...x...x.x..:..:....-.......:..............x...........-.......x...x..........:..:::..:.......x.x.:x....:.....--..x:::..:...........::-:..x......x.-----....x:x.x...:.x:...............xxxx...:.x.--:.:x..x:.....---.x.::......--....--.......:..:x.x..:xxx:x..:......x..:..-----------------..:x:::.......:......x...x:.-.x......:::.....xx:.-::..::x:....x......:.:......:..x:...-------------..::......:.:.xx.::x.:.::...x..xxxxxx......:....x:.xx..... 15M1I90M3D108M1D24M1I15M1D17M2I124M4I100M6I38M30I14M1I39M3I17M3D19M6D287M2D20M2D5M1D39M6D8M2I22M2I9M30I20M3D20M4I17M1D197M12I87M3I22M3D20M2D14M1D15M2I10M1I29M4D18M3D22M2D26M2D6M1I7M1I13M14D34M6D19M3I10M1D7M3I63M4D90M14I81M17I54M1D39M3D39M8D17M2I6M3D6M4D31M3D6M1D22M9I14M2D20M7D14M2I15M22I8M1D8M4I26M31I111M1I148M87D57M6D68M1D11M2I23M1D108M6D8M4D12M1D31M1D21M39D16M1D9M2I58M3I28M22I25M8I20M4D8M20I8M10D41M14I46M13I3M1I19M6I17M5D20M24D7M6D8M10D12M12I9M10D12M2D22M2D26M3I17M11I25M2D23M2D9M5D30M1D35M2D15M7D17M1I15M1D9M18D11M10D22M1D9M7I24M5D18M7D38M4D28M1D65M17I15M6I18M12D20M1D8M1D11M1D19M15D23M9D18M22D32M14D13M3I5M3D19M1I15M19I21M6D14M7I9M3D15M11D86M2D17M4I35M1I20M4I30M1I11M5I28M5I37M1D34M1I54M2I22M1D12M5I42M2I13M3I11M2I4M2I37M17I28M1I20M1I36M13D58M 3226/4514 71.5% 4962/94230402 0.0% 953/4514 21.1% 6289104 NA +85607 chr4 + 190214555 23887232 23887231 23889289 2058 ATGTTATGGTTGAGA-AAAGTGCATGTGTTCTTGCCAATGTTGACATGCTAATAAAATCTGTGCTTCTGAATGTGGCATTATCCTGCTAATCTAAAACACATTAGTGGTAGCAAGTGTTCCTGTTATTAATTTATATTTGGCCTTTGGACAATGCCAGACTTAACAGTCCAAGCCCTGTAACTGTCCTCATCTGACATGCTGATATTTACTGTTTCCCTATACCTCTGTAACAGGTGTGCTT-TATTGCAATTACACAGACACATTCTACTGCCTC--TTTGCAACTATGACAGCTATTTCACAACTGTAGCCTCAATTTTATAATAAGATTTAAGAGGATAAAGCAGTCACTAAACACAAAAGGCTAATTATTGTATGTTATTTCACCCCAACAGACTTTT----CTCTTAGTTAAGGAGCAGACAATAAATTAGCTTAACTGCACTGATGATAATGAATCATTATAATTAAGTATAATTCTCCATTAACCTTTTGGAGGTTTTT----GTGCCATTGATGGTAAATTTTAAAGAGAGAGAGAGAAG----------------------------AAGGAGTGGACTTG-GCCACATTAATTATATTAATGAAAAAAGAAACTGGGTTC---TTAAAAAAATTAGTTAAGACAGGGGAAAGGGGGTGGAGAGAGGGGCAGTAAAGAATGACAGTCTTAGTGGGGTGTATGTCATGTGAATTGTCTCTATCAATCTTAGTAACCTTACTGTATATCACCTTCATTAAACTGTGAAACACGGGGCACTCCAAGTAGCTATAGTGATATAGGCCTATATTAACCAATGTACTACCCTGTCATTATGTGCAAAAGGGCATAATACGTTTTAGGATGACAGCAAACATTAATGATTCAAAAAATGAAAACTGCCAACGCTACCTGCTGCTCGTAATATTTTATACAGGCGGAGGTGATTCCCAGAGCCGCTGCCATGTAGGCAAAGCTTCTAGCAGCTAGCTGCCTATAGTGCAACAGAGAAGTGACTGGCCAATCTCAGCCGACTGGCGAC--TCTATCCATGGCTGGACAAGTA--GCCAAGACC-----------------------------TTTCCTCCTTAAGAAAAAAATTTAAAGGCCACTATTCTAAATG----CTTCTGATGTTTATTTGAAAATGACTGCAGGAATTCCAATGATTAAAATAAATCTTCCTTATTTCCATATGATCTAGTTCCTCAATCAACTCCTAACAGCATCAGGAATAATACATGATGGAAAAATGAAACTACAGCAGCTGAGACCCACAGTGCCAGCCAGACAACCACCCACAGGACACTCCGGCTACTCAAAGGCAATTAGGACTTTGAAG------------CCACTTATAACCCTGACTCATAATGGCTACAGGGCATATGAATTATCCATATCTATTCCGCCTTACCAAGAAATCAGAACAAGATAA---CAATTACAATCCACAAATACGATCTACCAAGGCAAGGGAGGGCAAATGGAGCCAACATTTGCAAACCCAGCAAAGAG--TTAAGAATCC-CGGGCATGCCTCGCTAGATAGGAAAAATGCATTCACAGACGGCCTTGGCCAAATTATTTTCACTTTAGATGTGTATCGCTGCACCACATGGACATCTTATTTAATCAAATCA-CGTGTGG-GCTTGATCCTCCCCCTTACCCTACGTGCCCCCAGCTACCCAGAGGAAACACTCGCAGTCTTTTGCCAGATTCATTGTTAGCAGCTG---GGATCCTCCATGCAATTC---AATTCGAGTCCATCTCACCAGAGTCCACAGAAAGTTTTGCTTGTTTCCCAAGTTGCCCAAACTTTCCTTCCGAGAGCATTCCATTGTGCTGAATGCAAACACGCCGAGGTCCTCCGTCCCCCCACTAGACTCCAGAGATTACGAGGAAACTGCTTGC-------------GTTATTTTCCCCCCTGTATGAATTGTAGCCAGCAGAGACTGTGGAATTGATGTATTGCTGTCTATTTTTACACTAGCAGCG-----------------AGCAGCTCCACACACAGTCCTGCATAAACTCTATTCTCTCTCAGCTTCAGGCAGCTCTCCGTGGTACAGGAAGATTTAACCATTGGCTTCCCTGCCACCGACGCGAACGGAAAACCTTGCACTGCCAGGC chr4 - 94230402 17594692 17594691 17596811 76633592 76633591 76635711 2120 ATGCAATTGCTGAAATGAAGTATATATGCTCTTGCCAATGTTGACATGATAATAAAATCAATGTTTCTGAATATGACATTATGTTTCTAATCTGAGACACATTAGC---AGCAAGTGTTCCTGTTATTAATTTATATTTGGCCTTTGGATGATGCCAGATTTAACGCTCCAAGTCCTGAAACTGTCCTTATCTGACATGCTGATATTTACTGTTTGC-TATACATCTGTAACAGGTGCACCTGCATCGCCACAACACA-ACCTACTGTATTCCCACCGTTACTGGATACCATGGTTATTCCGTAACCACAGCCTTAATTTCAGAGTAACACTTAGGAGGATAAAGCAGTCACTAAACACAAAAGGCTAATTACTGTGCGTTATTTCACTCCAACCGACTTTTTTCCCTCTTAGTTCAGATGCAAACAATAAATTAGCTTAACTGCAATGATGATAATGAATCATTATAATTAAGTATAATTCTCCATTAACCTTTTGGACATTTTTTTAAATGCCTTTGAAGGTaaataaaaaaagaagaaagaaaaagaaaaaaaaaaagaaaaaaaaagaaaaaaaaGACTGGACTTGTGCCATATTCATTATATTAATGAAAAAATAATTCCGTTTTATTTTTAACAAGTTTTTCGA---AGAGCCGAGGGGGTGAACC------CAGCAAAGGAAGACAGAGTTGCTACAATGAGTGTCATGTGGGCTCTCTCTATCAATCCTTGCAACCTTACTGTACATCACCTTCATTAAACTGTGGAACACTGGGGACGCCGATCAGCTACGGCGATGCAGGCCTTTATTAAGCAGTGCGCCGTCCTGTCATTATGGGAGTGAGAATCTAATACATTTTAAGTTGACAGCAAACATTAATGATTCAAAAAATGAAAGCAGCCTCCGGTACCTGCCGCCTGCAATCTGTGAGACCGGTAAAGGTGATCCCCAGAGCCA--GCACAGCAGGCAGCACTGCT--CCACT-GCTCCAGGAAGTGCCGTGCAGGAGCACGTTGCTAAAATC------CTACCAACAGTTAACCCAGCACTGCACAATTAATATTAAGATCAAATCTTTTTTTTTTTTAATTCTTTTTTTTTTCCCCCTCCACACTATGA---AGAAGTCATTGACATAAATTATCCATTCTGTTACTAGCTTG-AAATTACTGCAGGAACTCTAGTGATTAAAATAAATCTTCAATATTTCCATATAAGCCGGTTCCTCAATCAGCTCCTCGCAGCATTAGGAATAATACATGATGGAAAAACGAAGCTCCGGCAGCTGAGACCCACGCTACAAGCCAGACAACAACCCACAGGATACTCCAGCTACTCAGAAACAATTAGGACTCTGGAGCCAGAAAGTCATCCACTTACAGCCCTGACTCATAATAGCTACAGGACATATGAATTATCCATATCTATTCCACTTCACCAAGAAATCAAAACAAGATAAGAGCAATTACAATATGCAAACAGAA---ATCAGTGGATACAATGGCAA--GCTGCAAATATTTA-AAACACGACAAAAAGACTTAAGGACCCGCCTGCACGCTCTGCCAGATAGGAAAAACA----CACAGGAGAATGCTGTCA---CATTTTTACTTCAGATGGGTAT--CTGCCTGGCATGGACATCTTATTTAA--AAGGCACCGCATGGAACCTGTTTCTCTC--------------TCCCCTGTTGCCCAGGGGGAGCATTACCAGCACT------GATCCACTCGCAGCGGCAGGTCGGCTCCTCCG-GCAGCTCTGGGTTTTGCCTTCCTCTCGACGGGGTCCACACAAAGTTTGCCTCGCTTCCCAAGTTGCCCAAACT----TCCAGGTAAGGCTCCATTCTGCCCAATGCAACCGTGCAGAAATCCTCACACCTCACTTCATCCTCCAGAGATTACCAGGGAGCTGCTTGCTTTTTGCTTTTTTTTTTTTTTTTCCCCTGTATGAATTGTAGCCAGCAGAAGCTGTGGGTTTGATGTATTGCCGTCTATTTTTACACAagcagcagcggcggcagcggcagcagcagcagTTCACACAGTCCTGCATAAACTCTATTCTCACGGTTCCTCCTGTTG-TCTCTGCTGTACAGTGGGATTTAACCATTTGCTCGACTG---CTTGTGCGGACTGAGCGCCCTGCCCTACAGGGC ...:x..x.:...:.-:....::..:..:...................x..........x:..:........:..:......x:.x.......:.:.........:---........................................::........:.....:x......:....x.........:..........................x.-.....x.............::.:.-:..:..x.:x.....-..x:.:.x..:.x..x.--..xx:::x..:x.::.:....:.::...:::.....:.....:.x.:...x.:...:.....................................:...::..........:.....x.......----.........x..:x...:......................x....................................................x:.....----:....x....x.......xxx...:::...:...:..:----------------------------..:..x........-....:...x..................x..x::x.x..:---..x..x..:..xx.::.---..:.xx:........:.xx------...:....:.x.....xx..:x.:x::..x:.........:::.x............:.x.:............:....................:.....x...x..x..:.x:.....::.:...::......x......x..:..::.:::............x.x:x:..:::x......:.....:.x.................................:.x...xx..x.......:..::.:...x.x.x.x..x..:::.......:.........:--..xxx.:.....:x:..x..--.x:..-...x.xx:x.....x:::x..:..::xx.x..:..xx..------..:x.:..--.:x.:...xx:...x....x..--:::....:.-----------------------------.....:...:x.x.xx.x:.---.:.:.:..:.:x:x.....x----x.....x.::.x::...-....x..........:..:.:..................xx...........:.x.::............:.....x:......:.......................:...:..x.:...............:x.:.x...........x..........:.....:........:.::...........:..:..------------.......:.:..............:........:.........................:.:.:............:..........---..........x::....:.x:.---.:..:x.x.x:x:.x.....--.xx..x..:....:-....x.::....:..--.....:.:..-.xx...:..:::..:............::----.....:x.:x:x:x.:..---:.....:....:.....x....--....x:x:..................--..:x..-..::...-:.:..x.:...:.--------------:....x.:.:.....:..:.:..:.xx...:x:.------...:..:.xx:...:..x.---..x......:-...::..---:x..:.xx.:.x....:x.:.:.......x.......xx..:.:...................----.:.x.:x.:x::......x...:x.......x.::..x..::.....xxx..:.x.x::.xx.............x...:.:........-------------x..x....::..........................::......:x............:..............x......:-----------------......xx:x............................x.xxxx.:..xx.:x.-....:.:x......x::............x...:xx...---.:x::...:..x..:x:..:...x..:.x:... 15M1I90M3D108M1D24M1I15M1D17M2I124M4I100M4I38M28I14M1I39M3I17M3D19M6D287M2D20M2D5M1D39M6D8M2I22M2I9M29I20M3D20M4I17M1D197M12I87M3I22M3D20M2D14M1D15M2I10M1I29M4D18M3D22M2D26M2D6M1I7M1I13M14D34M6D19M3I10M1D7M3I63M4D90M13I81M17I54M1D39M3D33M 1505/1983 75.9% 2120/94230402 0.0% 212/1983 10.7% 6292540 NA +14047 chr4 + 190214555 23894368 23894367 23894763 396 AGAGACTGCA-TAGAACACAAA--AGTTGGTAGCA--GGATAGGATATAACAAAGACTTCTATTCTATAAATACTATAAAATTAAACCTCATTTTGCTTGAAAAAAATGCCACAGTGATGTCCATGTGAACAAAGAACCTTTGAGGAAATAACTAGAGGAAAATCAAG---ACAGCTTGAATGTCTCCTAGCATTTATTTTTATTTTTTTAATAAACAAGTTATGATAGACAACCTTAGCAAAAACATCTCTCATCTCCAG-TAAAACCTTCTGCAGACCG-GCTCTATGGAACTGAGTCAGCCTCTATTTTAATTTGGACCTCAAAATGTGCTTTTGGTGTTTTTCATATTAAAACAAAAAATAACATGAAAGTTAATCTGAGTTGCAGTCAATTGGACTAATCT chr4 - 94230402 17606489 17606488 17606864 76623539 76623538 76623914 376 AGTGACTGCAGTGGAGCACAAGCCAGTCTGCAGCACAGCACTGGAGAGAACA-------CTAACCTCTAAATACTCTGAAATCAAATCTTGTTTTAC---ACAAAACTGCTATGGTAAAGTCGATGTGAATGAAGCACCTTTGAGTGAAGGAACAGAGGGAAAGGCAGTGGACAGCTTTAGTGCCTCCTAGCAATT--------TTTTTTAATAAACTAGAGATGACAGACAGCCTTA-CCAACACATCTCTCATCTTCAAATAAGACTTTCTTCAGACAGAGCTCAGTGGAACTGAGTCAGCCTTTTTTCT----TGGGCCTA-------GCTTGTGGCATTTTTCATATTAAAACAAAGCATAATGTGGAAATAATTCTGAACTGTAGTCATCTGATCGGATTT ..x.......-.:..:.....:--...:x.:....--.x.:x...x.x....-------...x:..x........x.:....:...:..::....:.---.x....x...:.::..:.x...x.......::...x.........x:..x:.x:.....:...xxx..---.......x.:..:.........x..--------.............x..xx....:.....:.....-.x..x.............:..:-...:..:....x.....x.-....x:.................:.x..:.----...:...x-------....x...::...................:x....::..:..:.x.x.....::..:.....x:..:x.x:..:. 10M1I11M2I11M2I15M7D38M3D68M3I25M8D34M1D22M1I19M1I30M4D8M7D75M 278/366 76.0% 376/94230402 0.0% 40/366 10.9% 6287879 NA +3494 chr4 + 190214555 23895947 23895946 23896046 100 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACACACATATTTATATTTAATATTATCATTAAAATCAGTTGTAAAATATATTT chr4 - 94230402 32959568 32959567 32959664 61270739 61270738 61270835 97 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGTTATCGCC-TTAAGCTC--TTGCAACCCACATTT .....::x.:.:::..x....x.....::...:.......:.....:...x.:.....:..:x..:x...:::.-....:x..--...:..xx:.:.... 74M1D8M2D15M 66/97 68.0% 97/94230402 0.0% 3/97 3.1% -9063621 -85166781 +27366 chr4 + 190214555 23902702 23902701 23903180 479 TTTCCTTCCTAGAGACTAGAAGCATTTTTCAGAGGGTAATATTCACTTTAATTAC-AAAATGCACCCGCCTCTCTCTTCCAAGGGAGAAAAGCCTGTTGTTGCATTTATAATGTAGCTTTAGTTTTTGATGCCAAAAACGATTCAGTAAACACAGTTATGTTATGATATACTATTTCTTATTCAGTACTCA---------AATTAATCTCAAGGCAGTGCTGGCATTAATTCAATTTGACGCCTGTACTTAGGATTTCACATAGGTGCCTTCATCCAGTTCTTCTTTGCAACTAATAAAATCTTAATTCATGGTAATATATTTATTTCTAGTTCAGTTCATGTTAAGGAGTGCAGTACTTTACAGAAAACTAATTAATATCAATCATATATTATAACAC------TTTTAATGGTTCATAGGAAAATCCT-ACACTGGGGGAAAGATTAGATGAACCAAGGGGTCTTAGCCCATCCTATTTACTCTATTTTTAGGA chr4 - 94230402 17611271 17611270 17611766 76618637 76618636 76619132 496 TTTTCTTCCGGAAGAGTACTGGCACTTTTCAGAGGGCAACATCCACTTTAATTACTAAAGTGAACCCACCTTCTTCTTCCAAAGAAGAAAAGTCTGTTGTTGCATATATAATGTGGTTTTAGTATTTAATGCCAGAAATGAATCAGTAAACATAGCTACATTATGGTATACTATTTCTTATTCTGTACCCATAGTAACCAAATTAATCTCAAGGCACTGCTGGCATTAATTCAATCTGAAACTCATACTTTGGATTTCACATAGGTGCCTTCATCGTATTCTTCTTCTCAACTAATAAAATGTTAATATATGGCAATATATTTATTTCTGGTTCAGTTCAAGTTGAAGAGTGCAGTACTTTGCAGAAGCCTAATTAATATCAATCATATATTACAACACTGAGTGTTTTACTATATAAAAAAATAATGCTAATGCATGGGGATGAAATAGATGACCCAAGAACTCCTGCCTAGCTGTAACTTCTCTGTTTCTAGGA ...:.....x::...x..xx:...:...........:..:..:............-...:..x....:...:::........:.:.......:............x........:.:......x...:......:...:..x..........:..:..::.....:.................x....:..---------................x..................:...x:.:::.....x........................xx:........:x.............x.....x:....:...............:..........x...:.:..............:.....:x........................:.....------.....x.:xx.x.x.::.x...x..-.::.xx.....x::.x.......x.....::x..:.:x.:x:::x..x:.x....:...:..... 55M1I135M9I199M6I25M1I65M 382/479 79.7% 496/94230402 0.0% 17/479 3.5% 6291431 NA +33892 chr4 + 190214555 23904035 23904034 23905213 1179 TCATTCATTTTACTGCAGTGCAAATACTGGTATCATGAGATGAGGGAACACTCACAACAAGGGCTTCGGCAGGCCACTTTTTAATTCACAAGGGCATGGTGACGTGGGAGGGCATCTCAGAGTCACTACTAAATGAACTCCACAATAGGGCACAAATCT-GAAACCCAATCTTAGCCAGATACGAACGTAAGAGCAAATATGTACAGTATCATGTGCTTTCCAGCAGCCCTGTGTCTCGAGGGAGCTCTCTGACATCAGCAATTGAGACAGGTGGTTCCCTTTCCAACCCGTG---GAAAATAAAACCCTAGTTCAGAGGCACTAAGTAAATATAGCAGTACTGTAATTTTTCCTTGGTGCACTCTCCCTGTGATTTCTGTCCTATGATGACACTTTATCCCGGGAACCCAT-TCAGGACATCCATCCATGCCCATAACTGACTGAACATTTGCAAACTGGTTAATATTGACATT----AAAGAGAGTGTAGAAGACTCTGTTTTATGGC-CCCAGTTGGTAGAGCTAGGGTTTTCCTCCTCTCATTTATTTGGAATACGTTGTCAAGTGGCTGCTCAAAAC-----TTTACTGGATT---ATTTCACCCTTT---------GTCCCCTGTTATTAATATAACCCAACAGAATGACAGACAAGAGTCAGACCATCTTAAAATCACATGCACAGAGCAGGTCAATACCAATCATATCCAGTTTGAGTCTGAGAGCTAAAATCAGCTGAGATGTACTAAGCCCTTTGTGGTC-ACAACTATTTGCTTTTGAATTTAAGAATT-----ACTCACAGAAGGGCACCCCATAACGTGTGTATAAAATTACTTAATTCAGCTTCTATTTCCCTTTCTGAACATAGATACTTTT----------------ACACTCTGACAGCCGCTGGCTCTTAAAGCATTCTCCTTTTTGTTGTATCTCCTTAGAAACACAAATCTTGTTCCCTGGCAGCGGTGGCGCTAAGTGCTGTACCACATGCCCAAACTAGTTCTCCCTCGCAGCTTTAATTCACAGTAAGTGGCATGAAAGGAGGTCAACCCTTCTCAAAAAACACTCGGAGTTCTTTTCGACTTCAGAATCTATTTTGGAAAGCCCCACTCCCTAGTATGTAAAGAGCAGCTTCCCATTTTGAAATTCTGGC--CATAACTATTGACAACTTTATGGAATGGTCCACAAAAGGGCAAACATAGGGATA chr4 - 94230402 17612889 17612888 17614031 76616372 76616371 76617514 1143 TCATTCATTTAACTATTACATAAATACGTCTATCATAAGATCACACGGCTTTCA-AGCCAGAGTT----CAAACACATGTTTAATGCATGAGAGTATGATGA------------------AGAAACTCCT----GAACTC-----------ACGGGTCTCGTAGCCCAATCTCAATCAGATACGGGC-TCGGTGTAAATATGTACAGTATCATGTGCTTCCCAACAGCACTGTGTCTCCAGGGAGCAGCCTGACATCAGCGAAGGAGACAGGTGGTTCCCTTTCCAACCGAGGAGGGGAAAAAAAAGAAGAGTTAAGA--CGCTGTGTAAATATAGCAATATT-----TTTTGCTTGATG---TTTTGCTATGATTTTCATCCCTTAATGAAACTTCAACGCATGAACAATTCTCATAACTTCTTTGC-TACAAATCAGTGAGTGGATGTCACTAAG-------ATATTTATATCCCTAAAGGTAGGGGTACGTTATACTGTTTGCCAGCGTTCATTCAAAAGTACTGAAGTTTTTCGACTTTCAGTTTGTTATTACAGAGTGCCAAGGAGC--CACAAAGCCCTAGTTTCCTTGCTTTAAATGTATCCCTTTCCTATAGCTGGTCACTGTTATTAATAAAGCCCACAAGAATGAAAAACAACAGTCA------------ATCACGTGTGCAGAGCAGGTCACTACTGATTTTAGCTAGCTTGACTTTGTAAACTCTGAGAGTGTGAGATACATTACACCCTCCACAACCCACTGCTGCTTCATTTCGAATTTCACATTGCTGGAATTCATATATATGC------TAACCTGTGTATAAAATAACCCACTTCAGCTTTT-CTTCCCTATCTGTACACACGTGTTTTGTTGTTTTTTTTTTTAAACACAGTGACAGCCACTGCCTCTTAAACCATTTTC--TTTTGTTGCATTTCCTTAGAAACACAAATCTTGTTCCTTGGCAGCAGTTGCTGTAAGTGCTGTACCACATGCCCAAACTAGTTCTCACTCACAGCTTTAATTCACAGTAAGTGGCACGAAAGGAGGTCAACACTTCTCAGAAACCACTTTCAGTTCTTTGCTGCTTCAGTATCTATTCTGTAAAGCCATCCTCCCTA----ACAGAAAGTTGTTTCTCATATTGCGTCCCTCGCTTTTTTATTACTGTCATCTTTATGGAACGG---ACTGGAGGATATACGACGGAATA ..........x...::x::::......xxx......:....x.x:x::.x:...-.:.x..:.:.----..::.xxx.x......x..::..:.:...:...------------------..xx...x..----......-----------..:::...-.x.:........:.::........::.-.x:.x.:........................:...:....x.........x.......xx:...........:.xx.........................x:x.---.:...x....xxxx....x...--.:..:x............:..:.-----....x....:..---.:.:x..:......:::...:x.:....x....:.x.x.:x....xxx.-...x:..x..:x.x.-.:.xx..x.x...x..:.::.:xx:..:-------.....x.:..:----..:.x::.x...x:xx.:x......xx::..-::..x.:::x..x:..:::.....:.xx..:...x..xx..:xx.:.x:x..:....x:..--.x....:.-----...x..x.x..---..x.xx......---------.x:.x............x.:....xx.......x.:....x.....------------.....:..::............x...::..:x..x.:..:....x.:..x:.:..xx:.xx:xx......::.:..x:....:::::::.-..x:..::..xx...:......x.x.x.x-----.:...:.x.x:x..------....x............x..::.x........:.-:......x....x...:.x:.::...x----------------....xx........:...x........x....:..--........:..:.........................:.......:..x..xx.................................x...:.........................:..............x.......:...x....:xx........x.x:......x.......:..x......x:x.......----::.:.:..:x.:...:...x...x:x::..x..--:x.x.:..:..x..x..........:..---..x::...::.x..:xx..:... 54M1D10M4D33M18D10M4D6M11D8M1I27M1D105M3I22M2D23M5D12M3D49M1I15M1D28M7D11M4I31M1I61M2D8M5I11M3I12M9I46M12D90M1I29M5I14M6D34M1D27M16I35M2D197M4D33M2I28M3D23M 776/1092 71.1% 1143/94230402 0.0% 138/1092 12.6% 6291146 NA +3024 chr4 + 190214555 23913225 23913224 23913292 68 TATATATATTATATATTTTATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398806 33398805 33398873 60831530 60831529 60831597 68 TAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..x..:....xx:x.x.x.:::.:.:.:....:.:.......:.x.............x.....x... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -9485581 -84744821 +8851 chr4 + 190214555 23917833 23917832 23918110 278 GGTAAGATA--TCCAAATGCAT-GAAAACAAGCAAATCAATATCGCCACTCTTTTTGTAACAATAAATTTTATCTATTAATTAATGTTGTGACTTAGAGCAAATGTGCATGGCAGGAAACAGAAGGCCCTGCTGATACCAATTTTACAG--AAGGATGTAGTAGGT----CCATTGAGATACATTGTGGATATCTATGCTATGGCTCCAGTGCCGGCATGAGCTGGATGGATT--TAGCTTATAAAACTCTGGCCTTTCACCTGTTCAAGGCTACAATTAGCCCCTCTG chr4 - 94230402 17616798 17616797 17617079 76613324 76613323 76613605 282 GGAAAAATAGTTGCAAATGCACAGAAGTCATGTAAATCAGAACTGCTGCTCTATTTT--ACAAGAAAATTTCTCCATTAATTAATTTCATGACTCAGAGCAAATGTGCATGGCTGGAAACAGGGGATCCTGCTGATACCAATCTCACAGCACAGGATACCTTCGTTTTTCTCTTTGAGATATATAGCAGATG--TACTCCCTGGCTCGAATCCAGGTGAGGACGGGGTGGTTTTCTGGC---TAAAGCACTGCCTTCTAATCTGCTGAAGTCTAAGAGCAACTTTTCTG ..x..:...--.x........:-...:x..x.:......:x.::..::....x...x--....x...x...x..:..........x.::.....:..................x........::.::...............:.:....--x.....::xx.x.x.----:.x........:..x.::...:--..:x.:x......x.:.x.x..::x.::.x..:...x..--.:..---....:.x...x.:.:.x.:...:.x...x...x:.x:.:.:::.... 9M2I11M1I34M2D90M2I15M4I22M2D39M2I4M3D47M 191/271 70.5% 282/94230402 0.0% 18/271 6.6% 6301035 NA +21968 chr4 + 190214555 23924003 23924002 23925562 1560 CAGGAGGCAGGGGCAATTCCATTTCCATGCTGGCTCAGCCCTGGCCTCTCCTGGGCACAGG-TAGAAATGATACCAGGCCATGCTGAATCACTTACAGTGGTACTGTGATGAAAATAACTAGTCACAGGAGATTGGCTTGGCC--ATCAAATTCATTGCATGTTGCTGAAAATCAACTAGGACTCCAAA-----TGGGCCAGTCTTCAACT-TCTTGGCA-----------------------ACCCTCTCTATGAAAACAAATGCTTTGC-CTTATCCTT---------CCTATGAGATT----CCTCACTCCCTTTTTTGGGGGGACTGTCAGCACTCCTTGAAGGAACGGAACAATTAGTGTTCACAGTAGATGTTCAAGTGTCTAGGCCAGGCGTGGTGCCTCGTGTCTGTAATCCTAGCACTTCGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAGGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTAAGCCGAGATCACACCACCGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCGAAAAAACTTTCATTCCATTTCTTTTCTTAGACAGGTGT------CCAGGCAGAAGGATCTCAGAGTTTACTTTCTGC---ATACACAAACCTCCAT---ACAGCACCATGC--------------CTAGACATGACCAACTTCCTCACA--GTTGCTTATTGAATTCCTCCCCTCACCTGCATCACCAAAGTGTGC-CAGGATGTGATTTCCTGGCATAGCTCACTGGTCCTGCACAGTTTTTATTT---------CTCTCCTGCTCTGTCCCCCTTCATACACCAAACAGGAGAAAGGTGGATTCCTACCCCCACTTTCCT------------TTCTTTTATAGAAGAGTGATGGATTCATGGTGCATAAGA---TCAGAATATGTCAGCTTCAAGCAAC------ACACATTATCTTTTGAAAAGTATGAACTACTGTAACAATTAAAGCGTTTAGGAGACAA----ACCTTCAAGTGTCCTCAGAAGAAACGTGTAAGCACAATTTTCTTCTAAAATGCAAACTTAGAGAACAAAATATGGGTCTGAAAGCATTTTGTTTTTAATTAACTTTTCTAAAAATCTTCTCAATTTGAGTGATCTTTTACTGACCCATTGTCGAC-TGGAGGAAACAATTACTTTGGTCATTGAA-AGAGTCATTTTTACCAATGAGCTGTCATTATCAATCAAT-----CTAGGGTTCCC-TGCTCTAAATACAAAAATGAATAGGTGAATAAATCTGTAAGT--GGATAAATTGTCTGCACACCAATCCCCGCAGGCCATGTGTTTATAAGTCAACAGCTTAAAATGAAAACATCTGATGAAGGTAATACACCTGTTAAAGGAGCATAAAATTCCAAACCCAATGGTAAAATATAAAGATTATAAAGCCTCTTAAAGGAGCCATCAAAGCAAACTATTAAATGAATACATCTGCTCTGTGCTAGACTCTAGTTTATAAGTGCCGCTCAAAATAAAAGAGATTGAGGACAAACATTTCATAAA chr4 - 94230402 17620856 17620855 17622307 76608096 76608095 76609547 1452 CAGGAAGCATGGACAATTCATTCTTAATGCTAGCTCAGTCCTGGCCTCTCCTGGGCACTGGCTGAAAATAATACTAAACCATGCTGAATCATTTACAGTAGCTTTATGGTGTGGATTATCATTCAGAGAGGACTGACCTGACCCCAACACACTCGTCTCATGCAGC---AACGCAGACTGGACTCCAACCAGGTTGGAACAAACACCACCCATGTTGGCATCAGCACAGAAATCATGTCAGAGACTCACACGTGGGATAAACTTGCTATAAATTTATCCTTGTATTAAACCTTCAGTAATTGCCATCTCCTTGCCTCTTCTGTCTGCATAGGCAGTGCTTT----AAAACCGCAAC-----TTACTCAGA-CATATGTGCAGTTTCCTATTTCGAGTA-GCTTCCCCGCTCTTAT----------TTTCAGAAGG--------------------------------------ATGCTGGCCATTATGAGAAAATGCTTTGTTAATTAATGTTTCCAA---CAGTTGCACA----GATCTCTAATGCCTTTGCTA--------------------------------------AAATATAGGT---------------------------------------------------------------------CCTTTATTCTGCTTCTTCCTACAGAGAGATTTTGGTCACAAGGCATGGGAAC-----AATTTACTTCCTCCTGGATACTCGAGGTGCTGTGCTACAGCACACTGCAAAAATGGGAGTTCTCAGTCATGAAGGACCTGGTCATATGGTTGCCCACTGAATTCCTTCTCTTTCCACCATCATAAAAGGGAGTGCAAGATGCTGTTGCCATTTATATTCCACTGAT--TACACAAGCTATTTTCATGGCAGAACTATGCTGCTGCATTCCTTCTCA-----CGAGCTGGACAAACTGAGCTTTTTTAGTGGAATCTGCTAAAATGGATGTAGGCTCTGATAG------GACAAATTCATCAGGTAGGGAGCTCTTACAAGGAGTCATTTTAAGGTAATCTTTGTACCCATCCT-TCTCAAATAGCATGAGCCCTCTGAACAATAAAGGAGTACAAAA-ACAATAGCGACTGCGAG----CACAAAAGCAATGTGTAAAAA-GCTGCTTTTGTTAAATGTTCGCTCAGAAAACCAACC-TCTGCCTGATTGTACATTG---------GATTTTTCTACACGCTTTCCCA-----------TCCTTACAGACACATTTTGAAAGTAAAGGAAACAAAGGTTTTAATGGTGGGCTATTTTCATTTTTACTAATGA----TTACCATCCATTTATATTTTCTAGAGAACTCATACACTAAATAAAAAGA-GAATGTAAGAATAAATCTCTAAAAAAGAATCAATTTGCTGCACATCAATCCCTGCAGGCCATGTGCTCGTAAGTCAACAGTTTAAAATGAAAACATCTGATCAAGGTAATACACCTGTTAAAGGAGCATAAAACTCCAAACCCAATGGTAAAATATAAAGATTATGAAACCTCTTAAAGGAGCCATCAAAGTAAACTATTAAATAGACACATCTGCTTCACACTAGAACACATTCCATCAGTGCCATTCACAATAAATGAGCATTAGGACAAACATTTCATAAA .....:...x..:......xx.:.:x.....:......:...................x..-.::....:....:.::.............:.......:.:x:.:..:..x::..x.::.x...x..::..:..:.:..:..--.x..x.:..:.:x....:x..---..xx..:x:x.........x-----...:x..:x.x:..x.:-.x......-----------------------..:.x.x.xxx.:.x.x.xx....x.:x-:........---------.:.xx.x:...----:...x:.x...:..:..xxx.x.:x.x...::..::----.::.x..x...-----x.::...x.-:.x....x..:x.x:...xx:.::.::-.x.x..:..:x::.:.----------:...:.:...--------------------------------------..x.....:.x:.x.:x:...:x.:x.x.:x.:...x:x.x.x..---:..:..x:..----.:.x:..:xx.:.::x....--------------------------------------.:::.x....---------------------------------------------------------------------.:..:....:::.....:::x:...x..:.x.------.x.....x::.:.:-----.:.......:..x.---....x.:.:x:x.::.---.......xx...--------------::..x.....xx:..:.xx...:.--.....::.:.........:.:..:x..xx.....:x....x.x.:-..:....:x:..x..xxx:...x::.....:.--.:....:x:.x.x..:---------..x.x.....x::.:..:::...-----.:.:.x...x...xxx:.x..::.xxx:xx.x.:.x..------------xx..:.x....------..:::......x:x.:.x::::---.:.x..x:x....x:..x.:.:..:------..x...:x.-.:.::..x..:....:.:x::xx......x..:.x..x:.::.-....----:x..x.:..----.x..:...x..:......:x.-:x.x:.:..x.x.....:xx:..:...:...x..x:-.xx.:....xx.:.:x...---------:.:.......x.x:::...:..-----------:::....x...x....x.x:.x-.::.........xx::...::.x:.x.:x-.xxx..........:.....----.:.::...x..:x..-----....:.xx.:.-.:.x.......x...:.-....:x:x..........x...:x--.:..x....xx.......:.......:............:.::...........:....................x...............................:...............................:..:......................:............::.:.........:::::.....x:x:.x.::..x......::...x......x...xx.x................... 61M1I81M2I21M3D20M5I17M1I8M23I28M1I9M9I11M4I36M4D11M5D9M1D27M1D16M10D10M38D45M3D10M4D20M38D10M69D32M6I14M5D14M3I16M3I12M14I24M2I45M1I32M2D16M9I23M5D38M12I11M6D22M3I25M6I9M1D43M1D4M4I9M4D21M1D36M1D19M9D22M11D22M1I29M1I20M4D15M5I11M1I17M1D24M2I258M 881/1333 66.1% 1452/94230402 0.0% 346/1333 26.0% 6303147 NA +17199 chr4 + 190214555 23930378 23930377 23931037 660 TGGGGAGTAACGCCTTCTGACCACTGACATTTAGGTACAACGCTGAAGGACTATTTCTCCAGCTAGCACTTCAACACGGTTCTCTAATATCTTAAAGATCAACCTTA--ACAACAACAATGATGACAAAGGTATGAATTTTATCAGT---------TACAAGGTATAAAAAAAGGTTTTGAAATATGAACAACCTTATCATTGATTTCTTTCTTTTTA----------------------GGCCAAAAGAGCATATAT--------------------------CATTCAAGCTATGGGGACAAA------AATAAATTGTTGCCAGAGGCTGTTCAAATGGAAACCAGTAGCACCCTTCAGGGTTCAATGTACTTTTTTGTTTCTTTTTTCCTACCCAGACTCTCAAAGGGACAAACACATGCAGGAAAGTGATCCTGGAAAGAAGGGGTTAATATAAGCTGCACAGTGCACTCAGTGATGCCTTAAATAATTGTCACATGTCCCCTATAATCTGTCCCATGCTGTCAGCACTGAGTTAGTCATAATAATATCAGATAAGAGCTGTTCAAAGTGACACACTAACCAACATGGGAGCCACATGACTTTCTGGCTTGGCTACTGCCCTTCAGCTGAACTTTGGCTTAGAACACAAGGCT---CCCAGAGGCAGCCTGGCACATGCCGCCGC-GTGGAGTGTCCGGTGGCATTTTCCGTTGCTAGGGCCTC chr4 - 94230402 17624045 17624044 17624708 76605695 76605694 76606358 664 TGGAAAGTATCGCCTTTGCGCCGCTGACATTTATGCAGAACAGTGAAGT-CTATTTTGCCAGCTATGACTTCAGTGCCACTCTCAATAACTTTAAAGATCAACCATATGAAAACAGAAATGCT--------TCTGAATTTTATTGGCACGTGTTGCCACGAGAAATACAAAATA--TCTGCAACAGTCACCAC-TGGTGCTTTATTTATTTTTTTAAAAAGGGGCAGAGAAAACCTAGCTGAAGAAAAAAGCAGTCATAGCCCATGAATCTGCTCTGAACCACACAGACAAGTTAAAAGAGCCAAGTGATTAAAAAATAGCC-CTATAGAAAGACAGAAAGCAAGACGAGCTCGGCCCTCAG----CAGTGC-----------------CTTCTGCCAGCACCCT-----GTACAAACTGGGCCAG----------CCGGGCCGAAGGGGTTAATGCCAGCCGCACATTATACCCAGCGATGCCTTAAATAATCATCACATGGCTCCTGTAATCTGTTCCATGCTGTCAGCACTGGGTTAGTCATAATAATATCAGATAAGAGCTGTTCAAAGTGACATACTAACCAACATGAGAGCCACATGACTTTCTGGCTACACCACTGCCCTTCACCTGAACTTTGGCTTAG-----ATAGCTTTACCTCGGGACAGCGTG-----TGCGGCTGCTGCGGGGTGCTGGGCCGAG------GCTGCTGGGGCCCC ...::....x......:xx:..:..........x.:.x...:x.....x-......:x.......xx......:::.x::....x.xx.::.............x..--.x....:x....x.--------.x..........::.:---------:..:..:x...x....x:--.:..x..:.xxx..x..-.x:.xx..x....x...:...xx.----------------------.:xx....:....xx:..--------------------------..xx....:..x::.::.x..------..x....x.::-.:.x..:xx.x:x:..x.x..:x.::xxx.:x..:....----..:..:-----------------:.:..:..x:x..:..-----.x......xx:xx...----------.:..:xx............::x...:.....x.::..:...:...............::.......x.:...:........:.................:..........................................:.............:.....................xx:.:...........x................-----.x:...---..:x.:.:....x..-----...x..:..-.:..:...::x..:x.x:------.:....:.....:. 49M1D57M2I14M8D16M9I18M2D17M1D24M22I18M26I21M6I11M1D39M4D6M17D16M5D16M10D211M5D6M3I15M5D9M1I18M6D14M 430/595 72.3% 664/94230402 0.0% 134/595 22.5% 6306333 NA +16709 chr4 + 190214555 23942293 23942292 23942945 653 AAAATGTCCCTCTGAGAAAGGAC---TTAGTATCAATATTTAGATTTTATATCTAAATGATTCCCAATATTCTTGTCAATTCTGCATGGT-CAGGTTAAACAGAACTAGTGGATTTGGCTGTCAATACTCTAAGAATTTTTGTCTGTTTTGCTCTTGTCTAACCTACCTAGACATACTACATTACTATCATCCCAAATAAGTATAGAGTTTAG-AACAAGTCCCGATC-TTTGAAACACCCACATTACTGTTATTTACTTAAAATTCACTTCCACACTTACTGAATCT--------------------GTACAGCTCTGTGTTCACCATATCCCATTAAGCACTCATACACTTAGTATTAGTAAATTGGTCCCTCTGGGAATCTAAACTTAGGCACACATAAACACTACATCTTGGAATTCATAATTCTTTCATAATCACCTCCCATTT----------------------------------GGCATCTGTGAACTCACAAAGGCAAATTTCCTCAGTAAAGATCTGTTCTGAG--TCCAATATTTACATAAACAATTTCTGTTTGGAGTGTAGGTTTCTTCATGCACCAATAAACTCTCCATCTATGTTGGTCTCTAAATTTCAT-------GTTACATAAATTTTAGCACTACAGAAATACTTCAAGCAATGTTCACCATTTTCTCAGCACAAAAAGTCATGTAGACACAGTCTAAGAA chr4 - 94230402 17632345 17632344 17633053 76597350 76597349 76598058 709 AAAATGTACCCCTGCAAAGGGAAAGATTAGCATTAATTGCCTGTTGTCAAATTCATCATTTTCCCCAATTTATTAGAAGTTTTGTGCATTGCAGCACCACCAGAATAAGTTTGCGAGTACTGCAATACACCAA-------TCTTTATTCTGCCTTTGGCAAATTAATGCAGATATTTTGCCTTATGATAATTCGTAATTAATAAGAGATTTAGGAAAAAGTCCCACTCATTTGGAACTCCAATGCTACTATTATTCATTTGAAATTCAACTCTAAGGTTGTTGTATTTTATTTTTTTTATAGAAAGATATGCAGCTCTCTCTTTACCACATCCCATTTATTGCAAGAATACTTAATATTAGTAAATTGGTCCCTTTGGGAATCTAAATGTAGGCACATAT-AATAATACACATTGAAAACCATAATTCTATCATAATCACTTCTCATTTGAGGCTGTTGGTTTTAGTTTTTTATGGGGGGGGGGGGGTGGGTTAATTCAAGAAGG-AGGTTTCCTCACTGAAGATTTACAGTAAGATTTGAGTATTTACATAAACAATTTATGTTTGGAGTGCAAGCTCATTCATGCACAAATAACCCTTTCACATATGAAATTCTTAAAAGTAAAGCCACACAGTTAAATAAACTCCTGTACTACAGCTTCACTTCAGGTAATCTGTACAATTTTCT--GCATAAAAGACCA-GCAGGT-CAGCCTGAAAA .......x..:...x:..:...x---....:..:...xx::x.x.x.:.x..::.xxxxx.....x.xx..x..:xx.:..:..::::x.-...xx:x.x.....:x...xx::xx.xx:xx......x.:..-------.x.:.:..:...::...x.x..::x.:x:...:..x:.:.x...:x..x..:.xx...x.:..x::::.....-..x.......:x..-....:...x..x.:::....:.....:.:..:.......x:..:.x:x..::..x..:.--------------------:.:.......x.x..:....:........x.x::.xx:x.:.....:...................:............:x........:..-..:.x....:x...:..x:.........x..........:..:.....----------------------------------..x:.xx..x..:...x:....-.::........x.:.....:.::xx.:..--.:x.:..................x...........:.:.:.:x.........x.....x.::.:..:x....xx:x...:x...x.xx.x-------....x.....:.::x.:.......xxx:......:.:...x.x:..x.......--...:....:::..-.:..::-...:..:.:.. 23M3I64M1I42M7D73M1I14M1I59M20I92M1D48M34I22M1D29M2I90M7I54M2D13M1D6M1D11M 427/640 66.7% 709/94230402 0.0% 82/640 12.8% 6309948 NA +16705 chr4 + 190214555 23942293 23942292 23942945 653 AAAATGTCCCTCTGAGAAAGGAC---TTAGTATCAATATTTAGATTTTATATCTAAATGATTCCCAATATTCTTGTCAATTCTGCATGGT-CAGGTTAAACAGAACTAGTGGATTTGGCTGTCAATACTCTAAGA-ATTTTTGTCTGTTTTGCTCTTGTCTAACCTACCTAGACATACTACATTACTATCATCCCAAATAAGTATAGAGTTTAG-AACAAGTCCCGATC-TTTGAAACACCCACATTACTGTTATTTACTTAAAATTCACTTCCACACTTACTGAATCT-----------------------GTACAGCTCTGTGTTCACCATATCCCATTAAGCACTCATACACTTAGTATTAGTAAATTGGTCCCTCTGGGAATCTAAACTTAGGCACACATAAACACTACATCTTGGAATTCATAATTCTTTCATAATCACCTCCCATTT-------------------------------GGCATCTGTGAACTCACAAAGGCAAATTTCCTCAGTAAAGATCTGTTCTGAG--TCCAATATTTACATAAACAATTTCTGTTTGGAGTGTAGGTTTCTTCATGCACCAATAAACTCTCCATCTATGTTGGTCTCTAAATTTCAT-------GTTACATAAATTTTAGCACTACAGAAATACTTCAAGCAATGTTCACCATTTTCTCAGCACAAAAAGTCATGTAGACACAGTCTAAGAA chr4 - 94230402 17630553 17630552 17631261 76599142 76599141 76599850 709 AAAATGTACCCCTGCAAAGGGAAAGATTAGCATTAATTGCCTGTTGTCAAATTCATCATTTTCCCCAATTTATTAGAAGTTTTGTGCATTGCAGCACCACCAGAATAAGT--------TTGCAAGTACTGCAATACACCAATCTTTATTCTGCCTTTGGCAAATTAATGCAGATATTTTGCCTTATGATAATTCGTAATTAATAAGAGATTTAGGAAAAAGTCCCACTCATTTGGAACTCCAATGCTACTATTATTCATTTGAAATTCAACTCTAAGGTTGTTGtattttatttttttttttataGAAAGATATGCAGCTCTCTCTTTACCACATCCCATTTATTGCAAGAATACTTAATATTAGTAAATTGGTCCCTTTGGGAATCTAAATGTAGGCACATAT-AATAATACACATTGAAAACCATAATTCTATCATAATCACTTCTCATTTGAGGCTGTTGGTTTTAGTTTTTTATGGGGGGGGGGTGGGTTAATTCAAGAAGG-AGGTTTCCTCACTGAAGATTTACAGTAAGATTTGAGTATTTACATAAACAATTTATGTTTGGAGTGCAAGCTCATTCATGCACAAATAACCCTTTCACATATGAAATTCTTAAAAGTAAAGCCACACAGTTAAATAAACTCCTGTACTACAGCTTCACTTCAGGTAATCTGTACAATTTTCT--GCATAAAAGACCA-GCAGGT-CAGCCTGAAAA .......x..:...x:..:...x---....:..:...xx::x.x.x.:.x..::.xxxxx.....x.xx..x..:xx.:..:..::::x.-...xx:x.x.....:x...--------:..:x.:....x:..x.-.::xx.x.:.:..:...::...x.x..::x.:x:...:..x:.:.x...:x..x..:.xx...x.:..x::::.....-..x.......:x..-....:...x..x.:::....:.....:.:..:.......x:..:.x:x..::..x..:.-----------------------:.:.......x.x..:....:........x.x::.xx:x.:.....:...................:............:x........:..-..:.x....:x...:..x:.........x..........:..:.....-------------------------------..x:.xx..x..:...x:....-.::........x.:.....:.::xx.:..--.:x.:..................x...........:.:.:.:x.........x.....x.::.:..:x....xx:x...:x...x.xx.x-------....x.....:.::x.:.......xxx:......:.:...x.x:..x.......--...:....:::..-.:..::-...:..:.:.. 23M3I64M1I19M8D17M1I78M1I14M1I59M23I92M1D48M31I22M1D29M2I90M7I54M2D13M1D6M1D11M 428/639 67.0% 709/94230402 0.0% 84/639 13.1% 6311740 NA +17389 chr4 + 190214555 23946187 23946186 23946689 503 CCCATTTTGTCTACCAACAGAAATTATAGACTTTTAAAAATAGATTTT-GCCAAACAACCATGTGGGCAAATGCTGACTTGCAGTCTGGGAGATATCTCTTCGTCAGGCCCAGCAAGATTAAAGCAGGTTCTATTTTCATAGAGAGAGAGCCTCAAATGAAAGCACAAGAAAGAAATTCAC-TTCTTGTCGACATCAAGCAGTGCCCCTCACTAGCCAAGGCTGGGCTGGATCTAACAATTGCCAAAGAGCCGTACGCAGATTCAGAGTGGCTTCCGCTTGAAGAATGGCCTCGCGCTGCTACAAATCCAGGACAAGAGGATTTCCCAGTGCCCAG--CTCAAAGGACAGAAAAA-TTCTTTCCTACTCTGGTGTGCCAGGAACTTAAACTTGACAGTAG-AATAATATTAGTAGGAAGAACAGCAAAGGTACAGTGCAACCCAGACATGCAAGAAAGAAAGGAGGACAGGAATAAATCCTGCTACCAAAGTGTAGCAGATTGTTTGTT chr4 - 94230402 17633704 17633703 17634210 76596193 76596192 76596699 507 CCCAGTTTGTCTAGTTGGGGAATTTATGGACTTTTAAAAATAGATTTTCGCCAAACAATTGTGTGGGCAACTGCTGACTTGCAGTCTGCGCGGTATCTTTCCGTCAGCCTCAGGAAGATTAAAGCAGGTTCTATTTTCATCATGAGGGAGCTAAGGATGTAGGCACAAAGGAGAAATTCACTTTTTTGTCCACATCAAGCTGAGCCTCTTGCCAGACGATGCAGCGTTCACTGCAACAATTGCCAACATAATGTGTTGCCTTCTATAGTCCCTTCAGGTTGAAGAATAGCCTTGTACTACTACACGTAGAGAGCAGGAGTGTTTCCCAGTCCCTGGGTCTCTAATGCTAGGACAATTTCTTTCCTAGATTTACATGCCAAAAAGAT-ATTTTGACAGAAATGATAACGCTGGTGTACAAAGGAGCAAAATCTCACCACACCGTACACGTG-AGGAAGGAAATAGAGATGAAAATAAAAATTTCTCTGAAAGATCACACGGTTATTTATT ....x........x:x:x:...x....:....................-.........:::.........x.................x.x.:.....:.:......x.:...x..........................x:x...:....:xx::...x.:......:::..........-..:.....x.........x.x...:..::.:..x.:.x..x.x.:.x:x.x:............x:x:x:..::xxxxx.::.x...xx....x.x.........:....:.::..:.....x:.xx..::..:...x:.........x..::.--...x..x.x:..:.x..-..........xx:.x:::.....::..xx.-.x:.......x.:-:....:::.:..:x:x.:.:x......:x:x..x::..x.x:.x..:..-.:...:....x:::..::::......xx:.x..x:x....xx:.xxx.:..:...:.. 48M1I132M1I154M2I17M1I30M1D13M1I49M1D58M 339/501 67.7% 507/94230402 0.0% 8/501 1.6% 6312483 NA +17697 chr4 + 190214555 23946187 23946186 23946689 503 CCCATTTTGTCTACCAACAGAAATTATAGACTTTTAAAAATAGATTTTGCCAAACAACCATGTGGGCAAATGCTGACTTGCAGTCTGGGAGATATCTCTTCGTCAGGCCCAGCAAGATTAAAGCAGGTTCTATTTTCATAGAGAGAGAGCCTCAAATGAAAGCACAAGAAAGAAATTCAC-TTCTTGTCGACATCAAGCAGTGCCCCTCACTAGCCAAGGCTGGGCTGGATCTAACAATTGCCAAAGAGCCGTACGCAGATTCAGAGTGGCTTCCGCTTGAAGAATGGCCTCGCGCTGCTACAAATCCAGGACAAGAGGATTTCCCAGTGCCCAG--CTCAAAGGACAGAAAAA-TTCTTTCCTACTCTGGTGTGCCAGGAACTTAAACTTGACAGTAG-AATAATATTAGTAGGAAGAACAGCAAAGGTACAGTGCAACCCAGACATGCAAGAAAGAAAGGAGGACAGGAATAAATCCTGCTACCAAAGTGTAGCAGATTGTTTGTT chr4 - 94230402 17636940 17636939 17637445 76592958 76592957 76593463 506 CCCAGTTTGTCTAGTTGGGGAATTTATGGACTTTTAAAAATAGATTTTGCCAAACAATTGTGTGGGCAACTGCTGACTTGCAGTCTGCGCGGTATCTTTCCGTCAGCCTCAGGAAGATTAAAGCAGGTTCTATTTTCATCATGAGGGAGCTAAGGATGTAGGCACAAAGGAGAAATTCACTTTTTTGTCCACATCAAGCTGAGCCTCTTGCCAGACGATGCAGCGTTCACTGCAACAATTGCCAACATAATGTGTTGCCTTCTATAGTCCCTTCAGGTTGAAGAATAGCCTTGTACTACTACACGTAGAGAGCAGGAGTGTTTCCCAGTCCCTGGGTCTCTAATGCTAGGACAATTTCTTTCCTAGATTTACATGCCAAAAAGAC-ATTTTGACAGAAATGATAACGCTGGTGTACAAAGGAGCAAAATCTCACCACACCGTACACGTG-AGGAAGGAAATAGAGATGAAAATAAAAATTTCTCTGAAAGATCACACGGTTATTTATT ....x........x:x:x:...x....:.............................:::.........x.................x.x.:.....:.:......x.:...x..........................x:x...:....:xx::...x.:......:::..........-..:.....x.........x.x...:..::.:..x.:.x..x.x.:.x:x.x:............x:x:x:..::xxxxx.::.x...xx....x.x.........:....:.::..:.....x:.xx..::..:...x:.........x..::.--...x..x.x:..:.x..-..........xx:.x:::.....::..xx:-.x:.......x.:-:....:::.:..:x:x.:.:x......:x:x..x::..x.x:.x..:..-.:...:....x:::..::::......xx:.x..x:x....xx:.xxx.:..:...:.. 180M1I154M2I17M1I30M1D13M1I49M1D58M 338/501 67.5% 506/94230402 0.0% 7/501 1.4% 6309247 NA +13500 chr4 + 190214555 23949301 23949300 23949751 451 AAACATAACGACACTTGCAACCATCGATTCTCTCTGTGCTGGGCTGTTCCATTATGGAAGTCCCACAGCACCAAGCACAGC---ACTAAATTAC----GTACAGGTAGCGGCTGGCTATAG---------CTGCCAGCCAGCTTTCAGCAACATCCCCCATATGGCTAGGAACACTTGTGCCAGTTAATTAGCACTGGCATTAATCGAGAGAAGGAACATTGACCAGGACATCGAGGTTATCCTTAGACTATTTAAA-TACGTCATGTGATCACTCGTTCCATCTGTTATCAACATACTTCA--CAGTTAATCCAGTAAATAAACTCCCAACCATTTTAAGCAAATGGATTCCATTTTGCCAGGCCTCTGT---AGACTTTGCAAATCTCAAGATGTCTTCTTCCTCTAGAACCTACATT---GTGAGGTGCCACAAGGTTCAATGACACAGCCTGATGTGAATTCAAGGACAAGA chr4 - 94230402 17638721 17638720 17639165 76591238 76591237 76591682 445 AAATACAGTGGCATTTGCAGC----AATTCTTCCT--------CCACCCCATTGGTAACGGCCCAGAGCACAACACTAAGCTGAACCCAAGTGCTGCAGTACAGGTAGAGCTTGCCTCCAGGCATGCCAGCAGTCAGCAGGCTCTCAGCAACACCCCACAGAAGGCTACAAACACTCGTGCCAGCTAATTAGCAATGGCATTAAACAAGAAAAGGGACACTGACTAGGACACTGGGGTTAACCTTAGCCTATGTGAGCTGTGCTATGTGATCTTTTATTCCATCTGTTATCAACATGCTTCAAGAGATTAATCCAATA---------CTCACCATTTTGAACGAGCAGATACCATTTTGTT---TCTCGGTATCATACTTCACAAGTCTCAAAAGTTC-----ACAGTATGACTGACAGCTGGAAGAGGTGCCACGAGGTTAAAGG--ACAACCTATCTATTTTTCAAGGGCAAGA ...:.:.::.:..:.....:.----:.....::..--------.::::.....:xx:.x.x....x.....x.x:.xx...---..:x..x.:.----..........x.x:..x..x:..---------.x.:....x:...:.........:...x..x.x.....x:......:.......:.........x.........x.:...:....:...:....:......::.:.....x......x....x.:.:-.::.::........x:.::...................:.....--x::........:..---------.:x........:.:.:.:::...x........::---:...x..---.x....::...:......:.xx..-----x.xx..x:..:x...x:---:x..........:.....x..x.--...:...:x:xxxxx.......:..... 21M4D10M8D38M3I10M4I23M9I127M1I44M2I14M9D34M3D7M3I24M5D17M3I23M2D28M 299/420 71.2% 445/94230402 0.0% 56/420 13.3% 6310580 NA +6944 chr4 + 190214555 23953111 23953110 23954427 1317 TAAATAAAACTAAGCATGACTAGAAGGAAACACCATATTCTAT---CATGAGCTTTT----TCCAAGCTGATCACAAGCTAAATGTGTTGGATATGTACTCA-TTAAATGTGTAAAAGAAATATAATAATACCCTTTC--AAAGACATGTTTGGTCAACTAAGATTTTTAGTCGGTGTAATTGCAATGTAGCTATCTAGCATTTCTGAATCACTCCTTACTCTTCCTCTTGAATAAATCTCTTAGTAGAAAGTATTACTCCGTACTATTCCTTTTGAATAAATGTCTAGTAGAAGGTATTACTATGTTACAGAAACAGAGAGAAAAACTTTATTATGGAACAATGTTGGATTGGATTGGTTTAACCA--TACAG------GATGCAGTCTGCAGGTATTTG-AGTCAGATATTTGAATGATCAGCTTTTTGTCTTTACTGTAATATTTGGAGTATGCATTAGAG-------ATTAGGAAATCCTTATAGAGTAATATCCCCAGGGAAGTAGCCAGGGTCTC---ATTGCGCTGAACATTCAAAACTCACTTAAATT-----AATCCTGCAAC-----AGTGCATTGCATGATCTGTTGATTCTTTTCAATTTTCAGAACCATGTCATTACTAATGCCCACTGACAGAATACTTGGGAACAAAAGAAATAGTAACCATTTTATAATCGATTCAAGTCGTCAAACAACTTCACCTTCCAAAGTTAGAAACTCCAAGAGATATGTGCCAAGAAGAAAATACAAGGCTACATTGTCACATGTGGAAAACAATAGTATTCCAGGCACCTCGTATGATAAAAATGCTTCAAGTTAGAACAGCACATACATTGTTATGAAGATTTTTCATAAGACCGTACTGTCTACTAGAAAATATTCAGTTAAATTTCTTTTA---------AAATAAGGCTTCTTCCCTCCACCTTATAACTTACTCACCTAACCCCTTATACTAAGTATTTTTTTTTTAACTCTGCATAGCAATTTCACAACTAAGAGTTTACATTGCTTGTGGACACTGGCTAGCTTTATCAACCAAGCT---GAAATTTACATTCTCACATTTTTAATAGTGTTTCTAGGATGAAAGAAAAAGTATGGGCGAATGAGATCTTCATAGCAAATTCACCAAACTAAATGTGG-TACAGAAAATAAGCATGCTAAGTTTTTCCACTCTAGCAGTTTAGTAATGCTAACTGTGTTGATACAGTTTTCATACATTGCACATTTACTAAGAAG-TTAATCCAAGGCATATGTT--AGTAACCAAATATATATTTATTTTAAGCAACGGTCATTTTAGAGGCTCTCTGGACAATTTTGT----------TATTTATAATTTAAATGCAATATATACTCTC chr4 - 94230402 17640631 17640630 17641758 76588645 76588644 76589772 1128 TGAATATAAGGAGGAGTGCCTGGAAGGCAGCGCTGTATTTTATACCTCTATGCTTTTGGTGCTTAATTGGGTCCTAAATTAAATATGCTGAATATATACTTAATTAAATGTGCTAAAGAAATATTCTAGGTGCATTTAGAAAAGATTTGTTTGGTCAACTAAGATGTTTTGCAACTGTAATTGCATTATTGTTAT-TGGCATTTCTAAATCACTCTCTGCATTTCCTTTAGAATAAATGTCTCGGTAG---------CTCA------------------------CCAGTATAATGTATTACCATGCTGCAAAACTGGAGGAACA-----CATTATATATTCATGTACACTTGGCTT----TAACCACTTACAGTATAACGATGAAGTAAGGATTATTATGCAGTAAGTTTGCTGAATCATCA-TTCTTTGAAACCATAAATACACTCAGCATATACCACAACGTCCACCCAATACGAAATTC------GGTAA-------ACAGAACTTGCTTATATTTTGAAATTGAA-TGGACAATTGAAACTGAATTAAGTAGTCAAAACCCAGCATTTCATAAACATACTCCATAAGCTGTGG-------------TACAGCACAGCAT-ATTTCTCTTGTA---GGACAGGGAA---GAGAGAAAAAGAGGTAGCATCACATGCATTACTGA-------CATCGAGATACT---CCTTC-----------------AGAAATAGGTTCTGAATAGG--------GTCTAAATAGCTAAAATTATAAAAAGATAG----------------------AAAATCCCTTTATATTATA-------------TTTTCTGAAGCATCATCA----ACACTGCTGCAGAGCAAGGGAAATC----TATATCCCTTTTATCAGCTTCTAAATGTGATGTATATTATCTATTTGACAATATCCTTTGTCAAACT-GTATCCAGGGCATTTGCTTTCTCA-----------AAAATTGCAACCAA-------------------------------------AACCAAACCCAAGGAACATAAAACATCACA-----------------------ACAGAAGTAGGATGG----------CCTTTAGGACAGA---------CTGTAGGTGGACAGAGAAAAAAAGAACGTTTAGTTTTTCCACTCTAGCAGTTTAGTAACG-TACGGGGATTTTCGCTGTTCCTGTGTACTGCACTTCTGTCAGTAGGCTTAGTCCCAGGCATACATTTGTGTAACACAGAACATATTTGCTTTTAGCATTAATAATTTTTTTAATTACCT------TTTTGTAACGGCGCCGTATTTGCAATTTGCACTTAGTACATCCTTCC .:....x..xx.:.x:..x..:.....x.:.:.::....:...---:x.:x......----:::..x:x.:..x:..::.....:..:..:....:....:.-.........:x..........xx..:xxx.x...x--.....:x..................x...x.:x:x..........x.:.x.:...-.:........:........::.:.x:.....:.x........x...::....---------...x------------------------.:....x..x.......:...:.:..:..x::...::.x.-----:.....:x.x:x....xx:x....x..----......--.....------....x...xx.x.xxxx.x..-...x..x.xx:.....x....-:.:....xxx::.:x:xx.:.:.::.x:...:.xx:.:x.-------.x..x.....:.------:....-------.x:...x.x..:x:x:.:.:---....x:-..:...x.::.....x.x....:.x-----..:..x...x:-----.::::.:.x...:.x....x.-------------.x...x..x:::.-...x..xx..:x---x.....::x.---.:..:x......::...:.x.xxx.x:..x.::..-------.:..:.:xx...---.....-----------------...:...x..x.::.:x..:--------.x...x..x.::.x.xx.:x....x:....----------------------....x:x...:.x:...x.-------------.x..x.....xx.:x...----..xx.:...:xx.x:.::::.x..:----..x..::......---------....:x.::x.x.x::x..:.::.x.:..:x.x..:xx::..x.:-x...x.x::.:....x:...:.x.-----------..xx.::....:..-------------------------------------......:.:---.:..:x..x.x:x.....-----------------------.x....:x..x....----------:...:.x::..:.---------..:x.x....-:.x......x...x.:.:.x...........................:.-..xxx.x:..xx::.x...::::.::.:.....x.:.:::.:x.:.-...:...x.......::..--x.....xx.:x.:......::...x....x:::.x.....xxx:::.x:..------......----------.....::.....:x.:x:.:..:..x..::. 43M3I11M4I41M1I35M2I55M1D52M9D4M24D40M5D27M4D6M2I5M6I21M1I21M1D40M7I12M6D5M7D20M3I6M1D25M5I11M5I21M13D13M1D12M3D10M3D35M7D12M3D5M17D20M8D30M22D19M13D18M4D25M4D13M9I45M1D24M11D14M37D9M3I18M23D15M10D13M9D10M1I49M1D46M1I19M2I51M6D6M10I31M 674/1063 63.4% 1128/94230402 0.0% 319/1063 30.0% 6312480 NA +5198 chr4 + 190214555 23954205 23954204 23954427 223 CAAACTAAATGTGG-TACAGAAAATAAGCATGCTAAGTTTTTCCACTCTAGCAGTTTAGTAATGCTAACTGTGTTGATACAGTTTTCATACATTGCACATTTACTAAGAAG-TTAATCCAAGGCATATGTT--AGTAACCAAATATATATTTATTTTAAGCAACGGTCATTTTAGAGGCTCTCTGGACAATTTTGT----------TATTTATAATTTAAATGCAATATATACTCTC chr4 - 94230402 17644011 17644010 17644240 76586163 76586162 76586392 230 CAGACTGTAGGTGGACAGAGAAAAAAAGAACGTTTAGTTTTTCCACTCTAGCAGTTTAGTAACG-TACGGGGATTTTCGCTGTTCCTGTGTACTGCACTTCTGTCAGTAGGCTTAGTCCCAGGCATACATTTGTGTAACACAGAACATATTTGCTTTTAGCATTAATAATTTTTTTAATTACCT------TTTTGTAACGGCGCCGTATTTGCAATTTGCACTTAGTACATCCTTCC ..:...:x.x....-:.x......x...x.:.:.x...........................:.-..xxx.x:..xx::.x...::::.::.:.....x.:.:::.:x.:.-...:...x.......::..--x.....xx.:x.:......::...x....x:::.x.....xxx:::.x:..------......----------.....::.....:x.:x:.:..:..x..::. 14M1I49M1D46M1I19M2I51M6D6M10I31M 141/216 65.3% 230/94230402 0.0% 21/216 9.7% 6310194 NA +4985 chr4 + 190214555 23967355 23967354 23967449 95 CTACTTATTGAATTTTTAATTTGCAGATTATCGACCAAATTGGCTGCAATGGCTCTGAGCAATGGGGCCCACATGTCAGCTGGGTAGGTAAAGCA chr4 - 94230402 17650289 17650288 17650383 76580020 76580019 76580114 95 CTACTTATTGAATTTTTAATTTGCAGATTATTGACTGTATGGACTGTAATGGCTTTGAACAACAGGGTGAGTATGTATGCCAGACATCTGAAGTA ...............................:...::x..x.:...:.......:...:...::...:xx::....xx..::.::.xx.:...:. 95M 69/95 72.6% 95/94230402 0.0% 0/95 0.0% 6317066 NA +5057 chr4 + 190214555 23967355 23967354 23967457 103 CTACTTATTGAATTTTTAATTTGCAGATTATCGACCAAATTGGCTGCAATGGCTCTGAGCAATGGGGCCCACATGTCAGCTGGGTAGGTAAAGCAGACGCATG chr4 - 94230402 17652404 17652403 17652506 76577897 76577896 76577999 103 CTACTTATTGAATTTTTAATTTGCAGATTATTGACTGTATGGACTGTAATGGCTTTGAACAACAGGGTGAGTATGTATGCCAGACATCTGAAGTAATTCCATG ...............................:...::x..x.:...:.......:...:...::...:xx::....xx..::.::.xx.:...:.:x:x.... 103M 73/103 70.9% 103/94230402 0.0% 0/103 0.0% 6314951 NA +12717 chr4 + 190214555 23973364 23973363 23973738 375 GATGGAAT-CTAAAGGAAATGCATCATAAAATTTATATTGG-GCAGTCTTATCAGCATTGGACATGCATAATCTTGCCTTGCAAAGTTTTTGCTATGAAATTG-----CACACAAATTTG-------TTTCTTAAAGAGAGAGAGAGAGGA-----------AACCCTCTATGTTTCTATGGTGTTTGATGTCTATTTATATGTTTCTTAAAGATAAAGCATTTATTCTATGCATGATTTGAATTTTATGCATCTCTTCTCTTTGCCTTAACGGAAGTGAATTCTTATTGCATAGCCAAATTTCACACTCAATTTATTCTGCAGAGTAACTC-----CCTCCCTCCAGATGGGACTATAAACCAGT-AGAATGGAGTTTTTTTTAAAGTGTTCCTAATTGAATATA chr4 - 94230402 17655904 17655903 17656274 76574129 76574128 76574499 371 GGTGGAATACTAAGAGAACTGCATCTGAAAATGTACATTCACGACGTCTTATCAGCGTCGGACATACATAATTTTGTCTTGCAAAGTTTTTGCTATGAAATTGGTTGTCACACAAATTCGCGTGCTTCTCCTT-------------GCGGATTTTTTTTTTCAACCCACTACATTACTCTATTATTTGATGTCCATTTTAATGTTCCTTAAAGATAAAGCAAACATTTTATAC-----TAAAATTTCACGCA-CCCTTTTCTTTGGTTGAACGGAACTCAATTCTCACTACACAGTAAAATTTCACATACATTTT---------AATAACTCAGTAAACTCCACCCAGATGAAAATATCCACCTGTAAGCATGAAACATTTTT-------GTCTTAATTGAATGTA .:......-....::...x......xx.....x..:...x:-.xx...........:.:......:......:...:..........................-----..........:.-------:.:...-------------.x...-----------.....x...::..x..x.:x.:.........:....xx.....:...............xx:...:...:.-----.x:.....:.:...-.:...:......x:.x.......x.x......:.:.:..:..:x..........:x..x...---------.:......-----x....x:.......::.x...xx...x..-..x...:.::x.....-------x..:.........:.. 8M1I32M1I61M5I12M7I6M13D5M11I71M5D14M1D62M9D8M5I29M1I16M7D16M 264/340 77.6% 371/94230402 0.0% 66/340 19.4% 6317460 NA +10226 chr4 + 190214555 23973364 23973363 23973676 313 GATGGAAT-CTAAAGGAAATGCATCATAAAATTTATATTGG-GCAGTCTTATCAGCATTGGACATGCATAATCTTGCCTTGCAAAGTTTTTGCTATGAAATTG-----CACACAAATTTG----------------------TTTCTTAAAGAGAGAGAGAGAGGAAACCCTCTATGTTTCTATGGTGTTTGATGTCTATTTATATGTTTCTTAAAGATAAAGCATTTATTCTATGCATGATTTGAATTTTATGCATCTCTTCTCTTTGCCTTAACGGAAGTGAATTCTT--ATTGCATAGCCAAATTTCACAC-------TCAATTTATTCTGCAGAGTAACTCCCTCCC chr4 - 94230402 17654003 17654002 17654328 76576075 76576074 76576400 326 GGTGGAATACTAAGAGAACTGCATCTGAAAATGTACATTCACGACGTCTTATCAGCGTCGGACATACATAATTTTGTCTTGCAAAGTTTTTGCTATGAAATTGGTTGTCACACAAATTCGCGTGCTTCTCCTTGCGTATTTTTTTTTT-----------------CAACCCACTACATTACTCTATTATTTGATGTCCATTTTAATGTTCCTTAAAGATAAAGCAAACATTTTATTACTAA---AAATTTCACGCACCCTTTTTCTTTGGTTGAACCGAACTTCGTTCCTCACTTACCCAGTAAAATTTCCCACTACATTTTTAATTACTTC-----AGTAACTTCCACCC .:......-....::...x......xx.....x..:...x:-.xx...........:.:......:......:...:..........................-----..........:.----------------------...:..-----------------x.....x...::..x..x.:x.:.........:....xx.....:...............xx:...:...xxx.:.---:.....:.:...:.::..:......x:.x...x...x.xx:...:.--x..:.x:..:x.......x...-------.:....xx...-----.......:..x... 8M1I32M1I61M5I12M22I6M17D76M3D46M2I22M7I11M5D14M 220/288 76.4% 326/94230402 0.0% 63/288 21.9% 6319361 NA +3131 chr4 + 190214555 23976944 23976943 23977004 61 AAGAAGAAGGAAGAAGAGGAAAAGGAAAAGGAAGAAGGAGGAGGAAGAGGGAGAGGAGAAG chr4 - 94230402 81167077 81167076 81167135 13063268 13063267 13063326 59 AAGAGGA--GAGGAACAGGAAAAGAAAAAAAAAAAAGAAAGAGGAACAGGGAGCAGAGCAG ....:..--..:...x........:....::..:...:.:......x......x:...x.. 7M2D52M 46/59 78.0% 59/94230402 0.0% 2/59 3.4% -57190133 -37040269 +21671 chr4 + 190214555 23978237 23978236 23979607 1371 TCCCTATTTTGTTTGA-GTTTACTGGCTGGAGACTATTTTAATTCGTTTTATAGCAGAACAGTTAGACTATGCTCCATTTATTATAAACATTTGGTTT--------GCATAGAAGATTTGTTATGTTTTATTAATCCATCACATAGTCTTTCTAAAAATGTGATGAACGAGGCAGCATAAAATGTCATTCTTTATACACTTTAGGTGGTTTGGCAATTAAGGCGTCGAGCCTCTGTGGCTCTTCTGAATC-----------AAAGGCTGTTTTCTGATATGGATCCATCTTGCCCACATCATCTATGGA---ATGACAAAACAGATGATATATCCAAGCATCTGACAGCACTATTTCTATCAGGTTAT--AACCCTATTTGATAAACTCAAA---TCAGCAGCAAA--ACTATACCA-------GATTAATGAAAACCTCTCCAAAAGTGCACCCTGCCACTTCATTTCTGGGGAATTACAGCTAAGATACATTCTAAAAACATTCACATCAAATGGGGCAGGCTTTTTAGAAGAATATTTTATTTAAAG----CGACTGGGGAGGGGGAGAGTGAAACACCTGCAGGACTGTGTGTTCATCACATCATGTCCAAGAAGCTGCAGCAGGAACAAAATAAAATGAAATGTGTTTTTTGCAGATGAACAAAAGCTTCTTCAATTATAAAAGAGTAAACTGATAATAGAATCACAGAGAC---AAAGAAGTAATCCAAA-CACATGGCTCACTGCTTACCATATATGCAA-CATAGAAACAAGTTGCACCCTATTGCATATAGAAAGAGACAGGGGAAGAAAGTAAAGAAGACAGAAAATAGAAGAAGGAAATATGAGCTGCACGTTTTACTACACTTAGCTCACATTGCATTCAAAGGATAA-------------------TTTCATGTATAAAAATCGTTTAACTCAATAATGTAGCAAAATTTCTGGCTTGTATGTAATTA-TTGAAGAACACTAGCACCATTTTTTTCT-------AAGAAGATAACACTGTCATATTCAGATCGGGACCTTTT-ACCATGCAATAAAAAACCATTAATAA-------AAATTTATTTTTAACATCAGCAAGCCCAAAATACTTTGAAATATCAATTTTAAGGGATACTTTCTCCTGTATCTTTTATTATAAATGTTATGCAGACAAAGGCAGTAACCAAAAATCAATTTTTAATATATTTCTTCCTACCACAGGGCATGAGCAACATTAATGGCTTCTGCATCTACATGGTTACAATTATTAGTTTTGCCTTTCTAACACAGTGCACATAAAGTCTGCTCGGCTTACAATTTGGGGGATGGAGGTTC-----TATTCTGAAGGTTTTTCTGGATGTAAGTTAATAAGCAACAATCCAAGATCCTGAGAGTCATGCCATTACTTGCTTCTCCTATCCAGCATCCTGATATTTACAC chr4 - 94230402 17659269 17659268 17660589 76569814 76569813 76571134 1321 TCATTATTCTGTTTGCCAGCTACTG-CTGCAG----CTTCAATTCATTTAGCAGTAGACTTTTTAGATTGCAGTCCatttattataaacattttttttttttttttGCATAGGA-AGTTACGATGCTTTATTAATCCATCA-ACAGACTCCCTAAAAATATGATCAATGACACCGTGTGGAACGTTACTCCTTGTACACTTTAGGAAGTTTGTCAATTAATGCTTCAAAACATTACAACTATGTTGAAGCTTTCAAAAAAAAAACCTTGTTAGAAAACACAGAACCATATCCCTGAAGAGTTCTGCTGATTCAGAACAAAACA--CTGTAAATCTTA-CACTTGACAACACTATCTTTATGAACTTATTCAAAAATGTATGATATTTGCAAAAGTTTAAAAGAAAAGTATTAGACCCAGCATTTGATTAATGAATCCCTGTCTAAAGCAACTCCATTAGGCTGCGGTTCCCCAGCGCTGCCTTTCAGACA-GCTCTCAAAACA-------CAGCCAGGAC-TGCTCCTTTCCCAAGCACCTTATTAAGAGAACACATCTGAAAAGAGA-----TGAGGC----TCAGTGTGGTGAGGCTCTCATCTGGGGT---AGAAGCAACGGAACGCACCACA-------------GTTCCTTG--GACAAGGAGAGGCC-CTTCAACAACACAAGTGTTAATGAGTAACG-----ACTGAGCCCCAACAGCAGCAGTGCACATCTCATCCCTCGCTG--TACC-CACTTGCAGGCACAGCTGTAAGCAACACCTCGGTACA-----------GCCGAGGGGGGATGCA------------------------------------CACACCGTGCTGCGTGGCACCCGCCTGACATGCAAAGGGCAACGCGTTCTCGAGGCCTTGCTTTCAT-----AGCACTGCTTACCACGGCGCTGCGCCAAATTTTTTGGCTGATATTTAAATAATTCATGAACGCTAAACTCGTCTTCTCCTCTTTAACAGAAGAATAAAAGCATCAGATTCAGAAGCTGACCTTTTTACTCTGCTATATAAACCCATTAAGAATACAGAGAAACATATCCCAAACAT----------AAAAAGCTTTGAAATATCAATTT-AAAGGCTACTTTCTGCTATATCCTTTATTGTAAATGTTACCAAGAAAAAGGCAGAAACCAAAAATCAATTTTTAATATATTCCTTCCTACCACAGGGCATCGGAAACATTAACGGTTTCTATATCTACATGGCTACTCCTGTAAGTTTTGCTCTTCTCACA--------------TTTGCC---TTTAAAACATGATTAATGCATGTTTGCACATACATTTAAAGTACTTCTGGATGTAAATTAATTAACAACGCAGCAC-ACACAAACAACTTTCCCATTGTTTGATTACCCAGCACAACATTCTGCTATTTACAC ..x:....:......x-:x:.....-...x..----:..:.....:...x::..:...x:xx.....:.:::x....................xx...--------......:.-.x..::x...:...............-.:..x..::........:....x..:..x:.x.::.::..:..:.:..:..:...........x:.....x.......x..x..:.:x.x:.::::..x.x:....x.-----------...xx:....xxxx:.:.::..x....x.:x.:x.x:xxx...::x..---.x:........--:x:..x...:x.-..::.....:......:.:...x.:x....--..xxx.:.x.....xx:x....---.:.:x..x...--.:..x...x-------..........xx...x..:...:xx:.x..x.xxx:..x.:x...:xx:.x::.:.xx:.x...:.-::...x......-------..:x::..:.-x...::..xxxx:.::.::.....x.:..----.:x...:::..:.:-----...::.----x...x::x...x.x::x...:x.x:x..---......x:.:.x.x.x..x.x.-------------...::...--..::.:x.:.:..:-......:x.:.x...x..x..:x::...::-----..x...x.---.x..x..:.:.x..x.-.x...xx...:...--....-:.:x....:-..:..xx::...:x:....:::x.:..-----------:.x.:..::.:.x.:.------------------------------------...:::x.:..:.::xxx:.:.:.x.x:...x......::..-------------------......-----.:x.::.:...x.x.::::x..::x....x...:.....x:...x...x..-..x.x....:...:xx:.:.:..:.:..-------.::.::....x.x::...x.......xxxx........-..:x...x...x...x.......x..-------...:x...:::x.....----------....x:.................-..:..x........x..:....:......:.........:xx...x........x..........................:..................x:.x........:..:....::..........:...xx:.:.x........::....x...--------------.:...:---:...x..:x..:xx:...x.x...:-----..:x:.x..:..x:............:.....x.:....:xxx..x-.:x.x:.x.:::x.x.....::...x..x:..x::x..:...:...x......... 16M1I8M1D6M4D62M8I8M1D26M1D108M11I48M3I11M2D12M1D30M2I22M3I11M2I9M7I66M1D12M7D10M1D29M4I14M5D6M4D28M3D22M13D8M2D14M1D30M5D8M3I16M1I14M2D4M1D9M1I27M11D16M36D42M19I6M5D51M1I28M7I38M1I26M7I17M10D23M1D161M14D6M3D25M5I46M1D56M 810/1235 65.6% 1321/94230402 0.0% 222/1235 18.0% 6318968 NA +4416 chr4 + 190214555 23984735 23984734 23984839 105 GGGATTTTTATCCCCATTTTACAGATGAGGGAACTGAAGTGCAGAGAGTAGGAATGATTTTCCTAAAGCCATACAGTAAGTTGGTAGCAGAACAAGAACCGAAAT chr4 - 94230402 60756174 60756173 60756274 33474129 33474128 33474229 101 GGAAATCTTATCTCCATTTTACAGA----AGAACTGAGGTACAGAGAAGCTAAATGACTTCCCTGAGGCCATACAGGATGTCTCAAGCAATGCAAAGAATGAAAT ..:.x.:.....:............----:.......:..:......:xxx:.....:..:...:.:.........x.x..:xxx....:x:...::.x:..... 25M4D76M 72/101 71.3% 101/94230402 0.0% 4/101 4.0% -36771439 -57458963 +3276 chr4 + 190214555 23990062 23990061 23990160 99 TATTAATTATATATTATATATAATATATATTACATATTAATTATGTATATATAATATACATTATATATTATTAATTATGTATATATAATCCATGGAATA chr4 - 94230402 62168896 62168895 62168986 32061417 32061416 32061507 91 TATACACTGTATATTATGTATAACATACACTGAGTATAACATATATATGTATAATATGCACTGTTTATT--------TAAAAAAATGATACATGAAACA ...xx.:.:........:.....:...:.:.:x:...x.xx...:...:........:..:.:.x....--------.:x.x.x..:..x....:..:. 69M8D22M 63/91 69.2% 91/94230402 0.0% 8/91 8.8% -38178834 -56051568 +9428 chr4 + 190214555 23990287 23990286 23990706 420 GCACAGAATAACAATATCAATAAT--AGTAAATTTTGTCATGCAAATATT-GTATACAGTATATTATGTGATACTTATGTATTAGTGCAGCAATTACACAGCACCACCTTATCACAGTAGAAGTGCACCCTAGATTGTAGTAAGCAGAACTAAGGCACATTAGGATAGATTGTGTTCTTACAGTAATTACTGGAATACTACATTATCCATAAGAAAATTGCCACATGCTTCCATGAAACATAAGGAACGACATCCGTCTCCCATTTTATCACCGTAAGAACTCTGCCAGCCACTCTGGAGACTGAGTTCCAGCTGAGAAGC---ATTCAACATTTCCTGATCCCTGGAGAACTGAGTTAGTGCACTCAGGTCTAGCTCATCACT------CAGGGGTGTATGCAGCCATCCT---GACGT--------GGGGTTTCTGGAAGC chr4 - 94230402 17667849 17667848 17668290 76562113 76562112 76562554 442 GCAAGTAATACTATTGTAAATACTGCAGCAAAGTATGTGATATAAATGCAAGCGTACCATAATATCCACAGTATACATGTGTTAATGCAACCATTAAACAGAATACTACTGCCACAATGTTAATACATTTCAGATTACTGTAAGCAGAAGTCATATACGTTAGGTTACATCACTTTCCTACAGTAATTATTAGAATACTACATTACCCATAAG-AAACTGTCATTCGTCATCAAGACATACAAGTAACCCCATTTATCTTTCATTTCAGAGCAGCACGAGCACAGATGCCCTCTCTGGAGCTGGAGCTCATGCTGAGGAGCAGTACTACACATTTCAGGAACGCTGAGGATTAAAGTTCCCGTGTTTTCGACTCCTTAACTACTCCATGACACTGATGTAGGATGCCATTCTAGAGACGTTTGCTACAGGAGCACCTGGAAAC ...x:x....x:.x.:.x....x.--..:...x.x...x..::....::x-.::...x:..xxx.x:::::..:x:....:...:....:.x....x....x.:xx:x:.::....:.:xx.:.:..::::.....::x..........x.x.x::..:.....x..x..:::x...:...........:.:.............:.......-...:..:..:x:.::x:..x..x.:.:...x...xx...:::...::.....:.xx:.x.:.x..:.x.x.x::x..x........x:x...:..xx......:...---.:.xx.......xx..x.x...::..x:x:....xx:.:::.:xx.x..xx:.x.::...------..xx.:....x.xx.....:..---.....--------..:.:x:......:. 24M2I24M1I162M1D107M3I60M6I22M3I5M8I15M 258/419 61.6% 442/94230402 0.0% 24/419 5.7% 6322438 NA +9552 chr4 + 190214555 23990287 23990286 23990638 352 GCACAGAATAACAATATCAATAAT--AGTAAATTTTGTCATGCAAATATT-GTATACAGTATATTATGTGATACTTATGTATTAGTGCAGCAATTACACAGCACCACCTTATCACAGTAGAAGTGCACCCTAGATTGTAGTAAGCAGAACTAAGGCACATTAGGATAGATTGTGTTCTTACAGTAATTACTGGAATACTACATTATCCATAAGAAAATTGCCACATGCTTCCATGAAACATAAGGAACGACATCCGTCTCCCATTTTATCACCGTAAGAACTCTGCCAGCCACTCTGGAGACTGAGTTCCAGCTGAGAAGC---ATTCAACATTTCCTGATCCCTGGAGAACTGAGTT chr4 - 94230402 17664791 17664790 17665147 76565256 76565255 76565612 357 GCAAGTAATACTATTGTAAATACTGCAGCAAAGTATGTGATATAAATGCAAGCGTACCATAATATCCACAGTATACATGTGTTAATGCAACCATTAAACAGAATACTACTGCCACAATGTTAATACATTTCAGATTACTGTAAGCAGAAGTCATATACGTTAGGTTACATCACTTTCCTACAGTAATTATTAGAATACTACATTACCCATAAG-AAACTGTCATTCGTCATCAAGACATACAAGTAACCCCATTTATCTTCCATTTCAGAGCAGCACGAGCACAGATGCCCTCTCTGGAGCTGGAGCTCATGCTGAGGAGCAGTACTACACATTTCAGGAACACTGAGGATTAAAGTT ...x:x....x:.x.:.x....x.--..:...x.x...x..::....::x-.::...x:..xxx.x:::::..:x:....:...:....:.x....x....x.:xx:x:.::....:.:xx.:.:..::::.....::x..........x.x.x::..:.....x..x..:::x...:...........:.:.............:.......-...:..:..:x:.::x:..x..x.:.:...x...xx...:::...:......:.xx:.x.:.x..:.x.x.x::x..x........x:x...:..xx......:...---.:.xx.......xx..x.x...::..x:x:.... 24M2I24M1I162M1D107M3I34M 219/351 62.4% 357/94230402 0.0% 7/351 2.0% 6325496 NA +89818 chr4 + 190214555 23997818 23997817 24001900 4083 TAGTTGGCAATAGAGATGGTTCAAGAAGAGTATTTTGAGTTAATATTGAACTTGCAAGTAAATACATAAA-GCTTCAGTGCCATAAAGCTAATTTAAAAG-GGACATTTCTCTTTATCGTTCCCTGGAGTATTACAGACTAGATCTATGATATTCTT-CGGCCATAATGTAGGATTCATTAAGGAACTGAAGCCATAATTGTCTACATCAGTACATATGAATCAACTGGATAAATCGTCCAAATGAATTGGCTAATACGACCTCAGTTCTTGTTATGAAGTTCTCCACATGACCCCTG--------GCAGGTGGACAGAAAACTGAGG-------ACTGAATTTTAACTGTAAGAATATC-----AGAGAAGGGAATTCAAAGGGAATTTGCAAAGCA------TGATAATTTGTATACACA--------TAAGACAATTTCTACCTCACAATTTTATCCCTTCAGAGTGGAAAATGATTAAATACATGAAATCACACACATATAAAATACACATATGTGTCTTTTTAAGATTTATGTAATAATTATGTATATTGCTTATT--GCAGTCAATATTACCTTTCTCTTTATATCAATAAGG------GAAAATTTAATTTCACTAGAAAAGTATGTATCATATAACGGCAAACCTACGGCAATTTTTTTTTTTAGCCATCATGTTT-CTACAATTTCTTGTCTGTACAATGTCAGGATAAAGTATCA-AAGAGAGAGTAAAGTAAGAG-------CTATGCAAAATGAT----ATCTTCTTAATT---AAGCAATGGTAGGTCA-CATGATAACAGGAAACCT--AGAATAACACAACCTTTACACT-----AAACTCAGC----------------ATCTAAT--TTACTGACAACAATTTTGGAAGAGTCAGAAAAGTTAGAGTACATGGGCCAGATATAGATATAATTTTGTCTCTTTAAAATTTCTGTGCATTATCATTCATAAAATATGTATGGCTTTATTGACTTCCTAGGGAGAACAAGAGGTTGCTTCCCTTCAGAATATAAAAAGCCAGGGAAAACTTGAAGAGTCAATAGCTCTCATACTAAATGCCATGGTAGCTTGGTG-------AGTGGCCTATATTTGAACGTTTTGATCTCCCTT------------AGTTGT-------TGTCAAGTTTGAG---GACTGTTTCAATGATTAAAA----------------TTCCAAATGGGATACTGTGACTAAAATCAGAAATGTAGACGCTTGATTTATTACGTGTCATGCACATTGAGAT----CAATCTTATGAATACATATTTATTTATTACAATAAAAAGAGGAATCTGTGATAACAAGGAACTCTGGAGATTCTTTTGCCTATGTTTCGTTTGG--------GCTGGTTACAGACAACAAAGAAAACAGCATATGTAGTACTCCTAGCAAGTGCATATCTACGAGAATACCAAGGGCCTCTTCCTGAGTGCCTTTATAAGCCACGGTATTCCCTACACTCTTCTGTGGAAGTTATCGCTGTATTAGATGTTGTTGAACATATTTGATATGAAAGCATTGTCTGTTTGCTACCAGTATCTAAGGAGTCTCTCCCCCAGAGTTGCCAGCAAGGTGCTGATTAATTAACTGAAGTAGTGAAGCTGAATCGTACAACAGCTGTTTAGAGAATTGTCATTAACTTGGTCTCCTTTCCTGTCTATTAGCTTTCTTGCAGTGAGCCCACTAAAATGCAAATCTTGGAAACTCAGCATTAGACTCTACCTTAACCTCTGTGCCCTGTTTGATGCCAAAAAGATGTGAATGGTCTGGGTTGATTTTTTGTTGTTGTTGTTGTTGTTTTAAGGGAAATAAGACGAAGAAACAAGAATGGAGAGAAGCGAAGCCAAAAGAAGTTGGAAAAGGGATTTTGGAAACTTCTTAGAAGTCACAG-TCTGCCTTGTCACTTGTCATTGGCAGGTAACGAGAGGACAGCCCTTTGGGCTGAATGTCAAAATGGGAATTGCAGATATCCTAAGCTTATTGAACGGTCGGCTATCTGACGATCTTTTCCTGGGACCTCCTTGCACGGGAAAGAAAAAGGCACTCTGTGATGGGGAGAGACGACAGAAAGGAGCAGCATGGAGAGGTAGAC-GCAGCCGCCCCTCTGGAATGAG----GACAGTTGGTGAAGGACTCCAACGTGTAGACCTCAGCTGCCCCAAGAACAAGGATGATTATTCAGAGGAGTGGAATCTATATTAAGTGGCAGATTGGAGGGAGGGTCGAGTTGATGAGACGC-----------AAGCACGTCATTAAAA-----TGCTCTCGGGTGAGGCACAGTG--------ACTCAGA--GCGAATAAAAATGATAGGTTTCAAATCTTTCCTTCCTTCTTTCCTACCTTCCTTACTTCCCTCCTTCCTTTATTCTTTTCATTTTCCTTTCTTTTTTCTTTCATATATATGTTTAAGTCTACCTGCAGATTTTGTGAATGACAACAATGTCTTCCACATTCAGGCCAACGAAATTACTTCATAACAGAGGCTGTCACCGTTTCATCCTAGGTATCACTTGATAACTCCACTAAGCTCTGCTTATTCCCTCTGACATGAATCTCAGAGACTTGGTACCAGAAAGCTCAGATGTTAACACCTTCTGTTGCTATAACAGTTACCCCTTGCAATTTCATTTGCCTCGGCACTCCTTCACACTGGTCTCACTTTATAAAACAGCTAAGGAATTTTCAACTCAGAAAAAAGTACAAATTAAACACGTGCTTAAATAGCACATAATGGGGTCATCAGGGCATATAATAAAAAAATCCAAATACATCTTAAAAATGCAGCAGGTGCTTTTTTTTAATGAAGCAGATAAATGCAGAAAAG-AATGCACTGATACAGACAGAGCATCTGCCTCATGATAAAATTAAGTCTTGTGACAGAAATAAATCACTGTGGGGGAGAATGTAACCCATTATCCAATAGGATTTTTTCTTTTTTTCTTACGTGACAGGACTTATTGGATTCCCTGACGCTAGGCAGCTAAGTGCATCCACGATTTGATGATAAATCAGAAAGACTGCAGGATTTGAAATTTAACAACTACTTATTTTTCTGTGATATAGAGATAAGGGGAAA---------ATTTCAGTGAGTAACTATTAAATTGGGAATCTCCTTTTCTTTTCTGATAATCTGATCCTCTGGTACTATGTCACATCATCACACAATGCCAACAACCAGCAGTGAGCAAAATAGATTTTGGACTAAGATGAATAAGGGAGCTACTTATCTTTC-CTTTTCTTTTCCAATATT--CAGTTTTATCTAAAGAGTACTATAGAAAGGTTACTTTTGACATAAAAATATACTGCTCTTATTACACTTTCCTTTTTATCCCCTTCAATACTTTAAAAAATGGCAATAAAGGCATGTTTTTCTTTTTAAAACATTTTCATGTTTGAACAATAGAAAAGGAAAATCCATATATCATGTTAAAAATACACAGGAACTAATAGAGCTCAAGATTACCTTACCATGTTTGATAAATGTGACTTGCAAAAACACACCTTCATGTTTTAATGATTTTCT-TTGTTATAA-TATGCTATTAATTGGTGGAAGTGGGGAGGAAATAATTCACATCTTCAAGATGCACCTTTATTTTTCCACGTTGAATCTGTGTAGCACCTTGAGTGCTTTGCTGACACTGGCACCTATCACAAGCTCTCCTACCGAACTATATAGATTGCCCTTGTAAGAAACAGAGAGAGCAAACTCAAATGATTTTTTTTTCTCCTGGTAATTTTTTTAAGTGA--------GAACGT--CTTCA-------AAAACCTGATCC---ATTGTGTAAAAA-------CAT------------------------------AGCAACAATTTAGCAACTGACATCCCA---GCAGAAATAGTGTATTTTTGTGCCAAGGTATATTTCAAAAGCCA----AACCAGAATCCCTTTTCTTGTAAACTAA-------------ATCAAGCTCACTATAAAGCT--------------------------CCTATCACTGATTTTT---------TTTTCCTACATCTTGTCTTGTGAAGGGGCGAAGGTGGGGTTGGAAAGAGAGGTATTAAACATTGATCACTGGTAATTACGGTAATCTCCTTCAGGAGCTTTAACTGCTACAAACTCATCCTGTCTTCAGAGAGAGCTAACTCCATGTGACAACACAAGGAAAGCTGTTAAAGAACTGTAAACTCCTGCAGCTGGGTACCAGCCTTTAATTAGACTGTGGCACCGAAACAGACGTTCTTCAAGTACCCAGAGAGATATAATG chr4 - 94230402 17671042 17671041 17674973 76555430 76555429 76559361 3932 TAGCTGACGACAGACAGAGTTCAAAACAAGTAGTTTGGGTTAATAGTGTACTTGCATGTAAATACATAAAAGCTTCAGCGCCGTAAAGCTAATTTAAAAAAGGACATTTCTCTTTATAGTTCCCATGAGTATAATAGA----AGCTATGATATTCTTTCTACCATAATGTAAGTTTCATTAAAGAGCTGGAGCTATAATTGTCTACATCAGTACATAGCGGCAGACTGGATAAATTGTCTACATAAATTGCTTAATACAACTTCATGCCCTGTTCCAGAGCACTGC---TAACTCCTACAGCTATAGCAGCCGGTCC---AGCTGAGGTTACGCCACC--ATTTGAAACCTGGTAATGCTTCCAAAGGAAAGAGAATGACCCCCAAACCCATAAAGCAACCCGGCGCTGAGCTGCACAAACAGCACTGCATTAAACA--TCAAACCTGCTCGCCTTATCCT---ACGGTGGACAC---------------AATTACGTGTCCATAA----------------TGCTGGAGATTTATGTGACAATTATGTATATGAAGTGATATGCAGGC--TATTATCATTCTTAATAAATCAATAAAGTCAACTGAAAAATTAA----ACTGAACATATATGGAACATTTGACAGCAGATATATTTCAGTCTCTTAAGC--GCTGTCATTTTCATTGCAATTTACTGCCTACCCTCCAAGAGGGTTAA--ATCAGAAAAGTGAATAAAGAAAGAGAAGAGGTCTCAGGAAAAGAACTACAGTGCACTGAATTGCAATTTAACAGTAAATCAGTGTGGCAGAAGGAAATTTTTGTCATAACAGGGCTGTAACATTTTTTAAAAGCCAGTTTTGTCTTGAACTTGAAGCTAATGTTCATTAATGGCAATTTTAGGACGACACTAAAATATAAAATATACTACAAATGTAGAGATGTAATTTCATTGGTTTAAGGTTTCTGTGCATTATTCCTCATAAAATATGAATGCCGCTATTGACTCGGTAGGTAGGATGCAGAGTGTCTTCTTTTTAAAGCCAGAGAGGAAAGAGGGAAATCTCTGAGACAACAGCCATTCTCCAGCACAACGTGCAGACTCAGCACTCCGCCGGCCGACTTTTTTTGTAAGTCTTGGCCACGTTTTTACTTTCTACAAGCTGTATTTGCATAACGGATTTAAGTTTGCCTCTTTTCATCCTGCAAAACGCACAGTACTTCACTTCAGAACGCATCACCTACCCCGTAATCACACAC--AAACGCACCA------ATGCGTGGTGCGTGCTTACATGCAGTACTTCTATAAACGCATACACAGGGATATCATCTGAAAGA---AACCATCCTAACGAGCATGTGAGGG------TTTGCAGTTGTTATCCCTGGCGCTCCACACCAGCCAGCAGTAACAAAGCAAGCAGCATATGCAGCACACC---------CATGTGTACGCACACATTAAACGCTTCTTTGCGAGCACCTGCGCGAGTC--TGTATTCCCTGCCCTCTTTTGTGGAAGTTATCGCCGTATTAGATGTTGTTGAACATATTTGATATGAAAGCATTGTCTGTTTGCTACCAGTATCTAACGAGTATCTCCCCCAGAGTTGCCAGCAAGGTGCTGATTAATTAACTGAAGTAGTGAAGCTGAATCGTACAACAGCTGTTAGGAGAATTGTCATTAACTTGGTCTCTTTCTCCATCTATTCACTCGCTTGCAGTGCTACCGCCAAACTGAGGATCTGGGAAAC-------------CTACCTGCACTTGTTTGCGCTCCATGCT--CAGAAAGGGGCAGCCGGCCACGGCCTGTTTT------------------------------TAAGAAGAGAAGGGAAGAGTAGAAAGGAGGGA---------------GAAAACG---TCAAGAAGCTTCCTGCAGGTCACGGCTCTGC--TGTCA-GTGTCAGGGGCAGCTGGCGGGCG------CCGCTCCGCAGCACGT--------------------GCCCAGGCT--------GGCGGGGGGGCTGA-GCCCGTGTCCTG------CCCTGCTCCGGGCAGCGGGACGCAGTCC-TGGTCTGTAG---------------GCAG--TGCTGGGGTCGGCAGCCACCCCCCCCTTGTGCTGCGTTGTGCCTCTTGGCACAGGGTGCCAACCTGCGGGCCTCGGCTGCCCCTGCAACAAAGATGATTATTCAGGAGAGCATAATCTGCATTAAGTGACAGGC--GGGGGAGTGCTGGTCCGAC---ACGCGTTAGCAGAGAAGTCACGCCAGTGGGGCTGTCTGCACACGGGGGAACTACTGAGGGTCCCCAGCGCAGACTGCCAAGAAAAAGG----------------------------------CATGCTGACTT-----------------------------TTTCTCTTTGTTTTGAT-----------------------------------------------------------------GAAATTAAAGCAAGACTAAGTTTGGC----TCTCAT-CGGGCGATGACCTGATCGCCCCAATAAGCTCTGCTTA-CCCCGCTGACGTGCCCTGCCATGACACG---CCAGGGATCGCA-ACGCCAACACCAGCTGCAGTGGTAACTGCTGCTCCATGCCGTTTAATTTAATGTCGTGCTCCTTCACGTGGGCCTGGCTTCACTG---TGTTTGGGAATTAT---------GGAAACTGGAAATTACACATGTGATTAAACACCATCTA--------ATCACTCCACGTACTAAATAAGCCAAAATGCATC-TGAAAATATATCAGGTGCAATTTTTGCGTGGAACAAATGAACGCGGGAATGTATTGCACTGATATAGATGGAGCATCTGCCTTGCGATAAAATTAAGTCTTGTGACAGAAATAAATCACTGTAGGGGAGAATGTAAACCATTATCCAATAGGATTTCCTCTTTTCTTCTTATGTGACAGGACTTATTGGATTCCCTGATGTTAGACAGCTAAGTGCATCCATGATATGATGATAAATCAGCAAGACTACATGATTTGAAATTTAACAGCTACTTATTTT--TGAGATGTTAAGATAAAGGAAAAAACACTTTGATTTCTGCAAGTAACTATTAAATTGGGAATCTC-----CTTTTCTGATAATCTGATACTCTGTTCCTGTGTCATATCATCAAACAATGCCAACAACCAGCAGTGGGTAAAATAGATTTTGGACTAAGATGAATAAGGGAACCACTTATCTTTCTTTTTTCTTTTCCAATATTCACAGTTTTATCTAAAGAATGCCGCATAAAGGTTACTGTTGACATAAAAATGTACTGTTCTTATTACATTTTCGTTTTTGCATGAATATATACTT----AAATGGAGGGAAAAAAATGTTTTTGTTGCT---TCCTTTCTACATTTGAATGA--------AAAAATCCATAAGCTACGTTAAAAATACAGAATAAATAATGGAACTTCAGCATG---TATAGAGCTTGATAAATGTGATTCAC-AAAACATACTTTCATGTTTTAATAGCTTTCCATTGTTAGAAGTATGCTATTAATTAGTGGAAAAATGG--------ATTCATCTATCCAGGATGTACCTGTATTTCT----------TGGGTTTAACCCTTTTTTCACTATCATGACTTTGG-----ATTACAGTCTC---------AGAACACAAGCAGGTACTGGAGGGAACGTGGAAGACAGGTAAGTAAGACTTCTG-------TGGGTACATTCTTAGGTGATACCACAGGAAAGTCACCTCAAATAAATAAAACAAGAATCACAATTATGTAAATAATGAGGTCATGATTAAAATAAAAGTGAAGAGATGAAGGCAAGCAACA--TCAGTGACAGCACTCCTAAGCGCAATGACAGTGCA--GCTGCACTTGGGGA-AATGCAGCAGCTACCTGAAGCTGATTAACTTAGCCAGTATGCGGATGTCTCACTTCGGGGCACGCTCACCTCGGAGCCATCACACCGTGACCGTCACCGGGTGGCCACTTGCTGAGTCCCACCGTGTAACCATCCTGCAGCCAGCACTGT----TGGCTCAAGCGGGACGGAGGGCAGAAGCCCCGAGTGCTGCTCACTTGTAATTAGGGTAATCCCCTTCACCAGCCTGAACTGCT-CTAGCTCTGTCTGTCTTCAGGCAGACCTAACTCCCCGCGACAGTGCCACAAAAGCTGTTAAAGAAATGTAAACCACTTCAGCTGGGTGTCAGCCTCTAATTAGCGTGTAGAGCACAGACACGAGCGCTTC----ACCCAGCAGAACAAAATG ...:..:.:.:...x.x:......:.x:....x....:.......x..x.......x.............-.......:...:................:-................x......xx......x.:...----.x.............-.x:..........:.x........:..:...:...:.......................xx:::x:...........:...:.x..:.....x:......:..:...xx:.:....x:::..:x..x.---.:..:...:--------....x:..x.x---.:......-------..:--....x..x:x.::x...:::-----..::...:....xxxxxxx:..:::::......------:.x.:.x:..:.:.x...--------.x.:...--.:xx....xx:x:::......:---.x:.....x.x---------------...:..::::x:....----------------.x:.x:..........:.:............x:xx.:x.--....x.--.....:.x....:xx..x........:.------.....x....----...::.x.x:....x.x...x.:..:...:.:x..:xx..:.:.:..xxx:--..::....x..:-:.:......x:..:..::x.xx::xx...:.x..--....-..:..x..:.....x.....-------..xx.x....x:.:----:.x:x..x....---.xx:..::...::...-::..::.:x......::.--:xx......x::.:x.x...:.-----...x:...:----------------.x.....--.:.:.:.:::.......:.:.x:::xxx....xx..:.:..:.:x:xxx.x:..x....:......::.:xx.....::..............:x:............x...x.x:........:xx....x..:.::x:::..xx....::..:.:.::xx:.:.:.xx..:.::..x.:xxx...x...:...:x.:x.x.x:x.::x.:..xx::..::.::-------:.:x.x..x.x....x.x..:...::.x.x:..------------..:...-------.:x.:::...:..---.x..x...:x..xx.xx...----------------...x:..:.x:x:..:xxxx.::x.....x.x.:--.:....x:x.------.:.:..x:...::::.x.x..----:.x.::...:..::....:x:.xxx..xx..x:x:.....---.x.::.xx....:..x.xx.xx..:------.....xxx....x:x::...--------:.::.::.xx:::.......x..:.........:..:..x..---------...:.x....x:x.:.::..:x..:....:x:...::...x::::..:.--x.........:.x.....:...............:..............................................................x....x.........................................................................x:........................:..::.::......x:..:x.........xxx..:.:...x..x::....x......-------------......xx..:.x.x...x..x:x..x.--..:....:x.:::x:..:.xx..::x:....------------------------------.....x..::.::x....:.:..:..:..x..---------------.....x.---.:x:...:....:.:x.:.....:.-.....--.....-x.....xx.....x.::..:.x.------..x:.xx..x.x.:..--------------------x..:.:...--------..:x..xx:x....-.x:.x.x.....------..:...x.x..:x..x:::.x...x..:-..:.xx.x..---------------....--..xx.:...x.:.-..x:..x....::..x:x..x.----.x.xx....::x...::x.....x..::.:....:........x:x.....:.............::...::x.....::........:...::--.:.....x.::.:x::..:---....-----------.:x....:..x.::::-----...x.x....x..:x:..x.x.--------:.x....--..x..x.....x.----------------------------------.x.x..x....-----------------------------.....:...x:...x..-----------------------------------------------------------------.......xxx..x:..x:..x:..x.----.:....-.x:.xx..x..:....x:.:...x.............-:...x.....:..xx::x.x:x...x:.---....::.x.x..-.:.::......xx...:x.:x:....x.:.:.:..x...x:...x....:x:x:x.::.........::x..:..x:...:.:x:---x.:.x:......x.---------::...x.:x......x...:...x.....:.x..:x..--------....xxx..::..x....x..::.x....:....-.:.....::.x.......xx.....xx:..:.:..:..:..:..:.:..x.-.x..........:...::............:::.....................................:.............x...................::......:......:..........................:.:...:................:...x..............x......:..x................:...........--..x...:.x:......:..:...---------.....x.::........................-----..................x.....x.x..:.....:.......x......................:.:................................:.:...........-:.................--................:.:.:::.x..........x.............:.....:..........:....x.....::x:xxx.xx......----......x::x...::x........x..x:.---x.x...::.::......::.--------:..........x:::.:............x.:x..x....:..:..:x..xx.:---..:x:x.:.............:.::.-......:..:.............:::....:-......x..-.............:......:x:x..--------.....:x.x.:..:....:....x.....:.----------.xx..x..:.x.:..xxx::..x.xx....x:...-----..:...:x...---------.xx.:.:.:::x.x:x:..x.:.:...:x:..:::..:::xx:x.x..:..:.x-------...xx.:x..:...:....--------...x..--.:...-------.....xx..x:.---...:......x.-------...------------------------------.......--.:..::..x.xxx...:.---...:x:.:....:.--x:..::.:x:..x.-.x.x..:x...:.----..x.x..x.xx...xx.:x...x:.x:.-------------:x..x......:x:::...:--------------------------..xx.::....x.:::---------::x....:..x.:x.:x:...----x...xx.:.:...::x.::::x...:.:x:::.::::..x.....x.......x.......:......xx...:.x.......-.x.:...xx:..........:x...x........x:.:....:::.x.x:...............x.......:x..x.........::......:.......xx...:.x:.xx.:...x:x.:x....----......x:::.:.x.... 70M1I29M1I37M4D15M1I128M3D9M8I11M3D8M7I3M2D20M5I33M6I18M8I7M2D22M3D11M15D16M16D39M2I6M2D28M6I10M4D51M2D12M1I34M2D4M1I20M7I14M4I12M3I16M1I18M2I22M5I9M16I7M2I225M7I33M12I6M7I13M3I20M16I34M2D10M6D21M4I40M3D25M6D20M8I42M9D49M2D259M13D28M2D31M30D32M15D7M3D25M1I5M2D5M1D23M6D16M20D9M8D14M1D12M6D28M1D10M15D4M2D13M1I22M4I94M2D19M3D4M11I16M5I22M8I7M2I13M34D11M29D17M65D26M4D6M1D37M1D28M3D12M1D85M3D14M9D38M8D34M1D51M1I227M2D23M9I33M5D115M1I18M2I93M4D30M3D20M8D54M3D26M1D31M1I9M1I26M8D31M10D35M5D11M9D54M7D19M8I6M2I5M7I12M3I12M7I3M30I7M2D18M3I14M2D14M1D13M4I28M13I20M26I16M9I21M4D83M1D130M4D18M 2513/3629 69.2% 3932/94230402 0.0% 757/3629 20.9% 6326776 NA +3082 chr4 + 190214555 24002064 24002063 24002122 59 AAATTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652079 67652078 67652137 26578266 26578265 26578324 59 AATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..x.:.....::...x...:...:..xx.x.x.x.:.:...................:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -43650015 -50580387 +3080 chr4 + 190214555 24002065 24002064 24002124 60 AATTCACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652079 67652078 67652137 26578266 26578265 26578324 59 AATTC-CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....-.....::...x...:...:..xx.x.x.:.:.:...................:. 5M1D54M 46/59 78.0% 59/94230402 0.0% 1/59 1.7% -43650014 -50580388 +3129 chr4 + 190214555 24002073 24002072 24002126 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -43650011 -50580391 +3340 chr4 + 190214555 24002075 24002074 24002133 59 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGAA chr4 - 94230402 67652084 67652083 67652142 26578261 26578260 26578319 59 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGA .....::...x...:...:..xx.:.:.:.:.:....................x..::. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -43650009 -50580393 +3006 chr4 + 190214555 24006011 24006010 24006068 58 GGGTTTTGTTTTTGGTTTTGTTTTTGTGTTGTTGTTGTTGGTTTTGTTTTGCTTTTTT chr4 - 94230402 67801512 67801511 67801569 26428834 26428833 26428891 58 GAGTATTTTATTTGCTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTT .:..x..x.x....x.x.......xx........:..:.......x....x:...... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -43795501 -50434901 +25658 chr4 + 190214555 24008618 24008617 24009557 940 CATAGAGTAAC-----TGCTATCTCTAACTGCATTCAAGTTTGGTTGCCCTTCAGAAGTACTGAAAATCTAACTCCTAATGGCTTTTGATATAAAAAAAAAAAACAGTCTTTGATTGACAGAATCTAATCACTAGAAGGGCAGCAAACAAAAGCTGGGAAAAGCACAGTTCCCTGTTAATTTTGTTTTTCCTTGCAACATCTATAGGCATCTGATCACACAGTTGTGCAATTATTTGCTAACTGAAGATGTTATTATTCTGTTACTGTCTTAGAAAAATAGTAACCTTTCTCAGCAAAGATAAAAATATGTGGGTTCTTTTCCCGCGGTTTATATATCTTAAATCTTAGGTCATTTTTACAGCAGCTCTCTCCTCAACTCTCCCACCATTTATCTTTCCATTCTCAGCAAGGGCTAGTTTACTTAATACAGGAAGACCTTCACATAACTTTCTGGCATTAATTATTATGGTGGCACA--AACTCCCGTGTGAAATATTTGCTGCAATGTGTCCCGCAGTCTATAAAAAAAAAAAAAAAAAAGAGAGAGAAGGCAAAACATTCCTGA--TGATTATTCATTATTTTATATCAAT-TTTAC--------ATAATTAATTGAGAATTTTATTATAAAGCACAGGGCCCCTTCTGTGCGATCTTACGTTAATAAGCTAATATAAAGATTTTGAAACTGC--GTCTGCAAGTAAAGGAGGCAAGA-----AAGAAAGATGGCCAAGTTTCTTCTGCAGGCTTCATTCTGAAAATAGGGTCTGATTTTATTCTTGTTAGAGGTGCCTTCTGATGATGGCATGAGGGTTATGAGGCA--ATGTGAGTGACATTAAAATAATATAGCCCTAAATGAAAACTAATAAGCAGCTCTAAAGAGTCAATCAGCCCATTAGGATGACAGGCAGTGA-GAAGCTGC--GCATTTCAGGGCTGACAATGTATTGCTAGTTTCTTT chr4 - 94230402 17676604 17676603 17677515 76552888 76552887 76553799 912 CATAAAGTAACCAGTATTTTATCACTGAGAGCATTCAAGTTTGGTTGCCCTTCAGAAATGAGGAAGATCAGGCTA-TAATAGCTTTATATCTGAAAA-------CAGACTTTGATTGACAGAATCTAATCATTTGAAGGGCAGCACACCCACATTAG-AAAAGCAGAATTCTCTGTTCAA---GTTCTGGCTTGCAACATCTATTAGCATCTTAACATTCGCTTGTACAAGTTTTTGCTAACTGAACATATTATTATTCTGTTACTGTGGTTGAAAAATAGTGACCTTTCTTTACAGTGATAAAAATATGTGGGTACTTTTCCTGTAGTTTATGTATCTTCTACCATAGGTCATTTTTAAAGAGTTTTCTTCCTCAG--GCCCCACCATTTATCTTTTCATTCTGAGAAAAAGCTAGTTTATTTAGCACAGTAAGACCTTCACATAATGTTCCTGTACCAATTATTACAGCGTCAGAGTAAGTCCCGTGCGAAAGGTTCCCAGTAATGTGTCTTGCG------AAGGAAAATAAACAAAGAAAAAAGGAAGACAAAGTACATATGACCTTCTTGCTGTCTCTCTTACACAAACATCTACAAGCAAAGAGAATGAATTCGAAGTTTGATCATAAAA---AGAG--------------TCTTACGCTGTTACCTCAACATTAACA---TAAAACTGCCAATCAAAAAAAAACAGAAGCAAAAACCGTAAGGAAG-----CACGCTTTTCAAAAAGG----ATTTGGGGCACAGGGCAGAGAGCACAAAATGCTATAAATGACTCTCATTGCTAA-ATGCATGCTATTAAAAAACATTTGACTGACACCAAGATAGCACATTTCTCCATAGAAA-TAACAAGTACCTCAGAACGGAGG-------TATTAGCAGGACAAACAACAACAAAGCTCCTTGTACTGTGGAACTCTCAGTGTATTATTTATTTACTT ....:......-----.x:....x..:.xx...........................:.:xx...:...x::..x-....:.....xx..x.:....-------...x.......................:.x...........x..xx.x::.:.-.......x.:...:.....x.x---...:.xx..............x:......x.x..:x.:x....:...x.x.............x..:..................xx.x..........:........:x:..:x.................x.......:.::......:......xx.:.x.............x..x:x:.:::......:--x:................:......x..x..::.........:...::....x...............:x...:x.:.::........::.:.x..x.--..x.......:....x:..:x.x.:........::..:------..::....x...x...:.:.:.::....:....::.:x:x...--.xx..::.xx:.x.:...:.:x..:-.:...--------.x...x....x::.:...x..:.....:---..:.--------------.......:.:x..xx::..:..x..x.---.:.......--:..x:x..:x..x:..:....:.-----...:...-----..x.:..:.:xx:x...----...:x.::x.:....:xx::xx:xxxxxx..:..x.::..x..::::x..x.::-...x:x.:...x.::x.--..x...x.....::..:...::.:.x::..xx..::...-...:...:.x...x:..x:.xx:-------:.....x.x....::..:::.-:.....x.--.:.:.x::.::..xx..:......::.x:...x:.. 11M5I59M1D21M7D53M1D22M3D194M2D98M2I38M6D43M2I25M1I5M8I28M3D4M14D27M3D9M2I23M5I7M5D17M4D54M1D17M2I39M1D23M7D21M1I8M2I36M 607/882 68.8% 912/94230402 0.0% 88/882 10.0% 6332014 NA +13975 chr4 + 190214555 24011737 24011736 24012050 314 TTTGTGGCAGCAGCTTCACATGAAATCTGTGGCAACCTATACCTTTTTTGAATAAGCATTGCCTCTTTAAGGACAATTAGGTATTTATTGGTACAATACATAATTTATTCTGGAGGTTACTGGTTTATGAAGG---TATGGGAAAACTGCCAACTTATCATATGAACAGCAGTTATGAGTAATAACAAGCGTTATAATTTACATTTAAATTCTGTTTTTACATTAATGAGGTACCTAAAATGCAACCCAGCAAAAGGCCTTTTGTGCACATAATCTCTTGCTACCTAAAATAGAAATCTGGTTTTATATTATAACTT chr4 - 94230402 17678262 17678261 17678573 76551830 76551829 76552141 312 TTTGTGGCTTATATTTCATGTGAAATATGCTGCAAACTGTACCTTTTA-GAACAATTATTGCCTTTTTAAGGACAATTATGTATT-AT--GTATGATGTATAATTTATTCCGGAGGTTACTGGTTTATAAAAGAGTTGTGGGCAAACTGCCAAGTTATCGTCTGAACTGTAGTTATGAGTAATAACAAGGGTTATAATTTACATTCGTACTCTGTTTTTAAGTTAATGAGCTGTTCTGTATGAAACCCAGCACTTCGCTTTTTGTTTCTATGTTGTCTTCTCTTCTAGCATACAACTA-GGTTTTATAATTTGCCTT ........xxxx::....::......x..:x....x..:........x-...:..x:.......:..............x.....-..--...::..::...........:.................:..:.---.:....x..........x.....:.x.....x.:...................x...............::x.:..........x:........x.::::x:x...x.........xxxx..:......x:x:..:x.x....x::x:...:x...x..x.x-.........x.x.:x... 48M1D36M1D2M2D43M3I162M1D18M 234/309 75.7% 312/94230402 0.0% 8/309 2.6% 6333475 NA +13468 chr4 + 190214555 24018229 24018228 24018720 492 CAATAAAGACTTGATATAGAACTATTCTCAGTTCTTCTTGCTTTTTCTCCCTGAACAGGTACAGTTTTCTTTTTTCTTTTTTA---------------ACAACAGTCAGTAAAAGTGTTTAAAATGTCACCAGTTACTTTTTCAA-ATTTCTATCCAGATAAGTCATATTTTGAAAATGACAACTAGTCTTTCTGCACATAGCCATTTTAGAAGTTTTACAGCTTATCCAATTTAATTCAGAGGGTAGATGGGTGAGGGTTTGGATGTGGGGTGAGGGTGATGAGGGGGGGCAAACCATGCCTCACCCTGCCCATAAATGCCAATCAACCTCAAGGCAGAGGCACAAGTCTCCATTTTTCAAATGTCAGTATGTCTTCTAATAAAAAAAATATATGGGGCCAAGCGACTATATAGTTCTCATTCCTCACGATCTCATTTTCAAATGTTCCTGATCTTTCATCTCTTGCTTATGTTTTCTGATGGAATGACAAAACCTCCAGCACATTC chr4 - 94230402 17682763 17682762 17683204 76547199 76547198 76547640 442 CGATAAAGACCTGAAACGCAACCATTTTCAGGTTTCCCT--------TCCCTGCCAAGGTACAGCTCCATACCCACGCCTCCACAGATGTGGAACAAAACAAGACTAAGCAAA-GTGTTTAAAATGTCATGGGTTACTTTTTCCATATTCCTACACAGATC-TTAACGCTTTGCAAGATGTAACCGGGCTCCTCGCTCACCCTGATTTATGAAAACTT----------CAATTTAA-------------------------------------------AAAGAGGGGAAGGAAATCATGCCTTACGCTGCCCTTAAATGTCAGTCAACCTTAAGACTAGGGAACAGGTCCCTACTTTTCAAATGTCAGTAAGACTTCTCATAAAAAAAACAT---GGGCAAGATGTCTGTATAGTTCACATGCTGTATGATCTCATTTTCAAATGTTTCTGATCTTTCTTTTCTTTCTCGGTTTGGCTGACAGAGTAAACCAATCCACAGCGCGCTC .:........:...x.::x...:...:....x.:.:.:.--------......xxx........:.::x.x:::x.x::.::.---------------....x.x.x..:...-...............:x:...........x.-...:...:x.....x-x.x.:::....x..:xx::...::.x..::::..x..:xx:x....xx...:x:..----------........-------------------------------------------:.x......::.x...:.......:..x......x......:..:.......:...:.x::..x...:...:.:.:................x.x.....x..........:..---....x.:::.x..:........x...x.:x:.:...................:..........x.:....x..::xx..xx....::..:.:.xxx..:.:x....:.::.. 39M8D36M15I15M1D31M1I15M1D56M10D8M43D114M3D112M 296/426 69.5% 442/94230402 0.0% 82/426 19.2% 6335466 NA +38552 chr4 + 190214555 24019648 24019647 24020654 1007 CAATTTAAACACTGCCTTTAAGTTAGCTTTAACACCTCAGAAAATGGGGCTATAAAAATAAGCAAAAGACCTGGGACTCAAATTGAACATAAAAGTTGTTGCAGATATTGTTTCTTGACAAACAGCCTCTCCAAACCACATAAATTGTCCAAAACCTCTTAAACCTTTGCTCTACATCACCCACATAGGACTGCAAAGGGAATACCACAAAAGAACTACAGGCTAATTGAAAAATCATTCACTTGAGATGCTGTAAGGATCATGCTCCATTTCTACAGACATATATAGAAACTGGAAACACGTGGAGTCCTTACTGACCTGAGCAACTGGCTAATCAGCACACTC-ATAGAGAAATTATCTCATTTTTCCTACCTTGCATGGCTGGATTCATATTTAATAATTCATGGGAGA-ATGAAAAATAAAATCTCTGCAGGGGAGATCAGGTATC-CAAACTCCATCCACTCCTTCATCTTGGCTTCTTCCCTTTCAAAGAGGAACTGCAATATTGACCGACAA-GCCAGTCT-ACCACCCAAAAGCTGATGTTTCTAAA-ACCTATTGTTCAAAGATCATTATCATGGTTTTCCATTAGCAGGACTAAGAAATCGCTTTCCTAAATAATCCTGTCAATGGCTTAAAAATATATTTATTTTTGG---------AAGAAAGGCTCAATACGGCACTGGCAAGGGGATTATATTGATCCTCATTTTGGAGG-ATTTTTCCCCTTGCTTTTTTTGAGGGACAATTAATATTGACTGTACCTATCATTAATTTTCCACAGTCAGCCAGGGCTTTTAGGTTTTATAAGTATAACATCAATACAGACTGTCTTAGAAACTCTTATTTATTCCATGTTTTTCTCCTGTATTCAATGTTCTCTATCCCCACAAGACAATGCTTCACAGGTTTA----AGCAATCTGCTACTAGAGAA-----TTCAATGCT-----TGCAAGGAGATGGGCTCCCCTTATCTTTCCAAAGAGATCGGGATGTGAGTAAAA--GGCAGTGATTTCACAGCTCC chr4 - 94230402 17683305 17683304 17684296 76546107 76546106 76547098 992 CATTTTAAACAATACCTTAAAGTTAGCTTTAACACCTCAGAAAACAATGCCATAAAAATAAACAAAAGACTGAGGACTAAAATTGAACATAAAAGTTGTTGCAGATATTGTTTCTTGACAAATAGCTTCTCCAAACATCATAAATTGTCCAAAACCTCTTAAACCTTTGCTCTACATCACCCACGCAGGACTGCAAAGGGAATACAGCCAAGGAACTGCAGGCTAATTGAAAAATCATTCACTTGAGATACAGTAAGTATTGCGCTCCAGTTCTGTGGAAGTATACAGAAACTTGACACAAGTGGCATCCTCCATGAACTAAGCAATTGACTAATCAGCAAACTCAAAAGGAAAATAATCTGGCTTTTCCTCCCCTGCTTTGCTGAATTTGCATTTAATAATCCATCTGAGATGCAAAAAAAAAAAAGTCTTCGAGATACATTGGGTGGCACAGATCCCTTCCCAGCCTCTA---GGACTGCTTCCTCTCAAAAAGAAAACTACAGCATTGACTGGTAACACTGGTTTGAGGACCCAGGAGCTGATATTTCTAAATCCCTATTATCCAAAGATTGTTATCACAGTTTTCCATTAGCAGAAATAAGTAAAAGCTTTGCTGTATAA--CTGACAA--------------AGTGATTTGGGGGGAAGGAAAAAAGAAGGCTCAACATTATACTGCAAGAGGTATCACATCGATCCCGATTTCTTATACATTTTTTGCCTT--TTTGCTTGA-GGCCATTTAGCATTGACTTTGCCTACTGTTAATTT--CACAGGCAGCAGGAGCTGCTGGGTTGTACAGGTACAGTACAAATGGAAACACCTGTAGAAGCCTTTGTTTATCTGACATTTTAATACTTCA---------CACTGCCTCAAAAATATCCCACTCCGTGGGCCTAGCATATCATTCTG-TATTAAAAAACCATTTCCAACGCTCATGATTCAAG------------CTTTGTCCTTCCACTGGGCACATGATGC-AGTAAAAAGGGCCATGATGTCACGATTCC ..x........x.:....x.........................:::x..:..........:........:x:.....x...........................................:...:.........xx..............................................::...................x:.x..:.....:...............................:.x.....x..:::......x....:::..x:....:.......x..x...x....x:....:xx...x..:.....:..:..........x....-.x..::....x....x::.......x..:...x.x....:...:::..........:...xx....-:::.....x....xx...x.::.:x.x..::...:x.-..:.::..x...xxx...::.---x.:..x.....::.:x...::::....:..::......:.::..-:.::..:.-.xx.....::.......:........-x......:.:.......::......::...............:.x....x..xx.....x..:x....--...x...--------------.x.x....xx..---------..::.........:.:x::....xx.::..x..:.:..:.....:x....:xx.x:-......:x....--...x:....-..x..x...::.......x.:....:::.......--.....x....x:.:...x:.:....x..:.:...:.::.:x...:x.:..xx::x.....:.::..:.....::x.::....xx.x..x:.---------.x..::.:.x.x..x.:xx::..:.:::..::..----.x..x....-..:..:.:..-----.:...:...-----.x....------------.:..:..:.....xx.:.xx.:x....:-.......--...x:....x....:::... 345M1I66M1I37M1I21M3D44M1I8M1I26M1I68M2D7M14D12M9I56M1I12M2D9M1D35M2D91M9D34M4I9M1D10M5I9M5I6M12D28M1D7M2I20M 705/960 73.4% 992/94230402 0.0% 79/960 8.2% 6336343 NA +23209 chr4 + 190214555 24024758 24024757 24025696 939 TATTAGTTCACACAACAGCACAATGCAAGGATGGGGAAGCATTGCCAAATAGCTGCTGTGCTCTGCAGTTGTGTAATATTTATCTAACAGCTAATATAATATCAAGTGACAGTTGAAACAGGCTACTTTCACCTAATCTGTGCATGCT------GTATGCAAAACAGCTCTGACCCTGGCTTGATTCCTTAAAGCATGTAGGATTTAATTATCTCCCACTGTTATAGAAGTAACGACATGTTACTTAGTGCTTTCAATACTGATAAATAAACTCCTTCTGACAAGTGAGCTAGAAACGCACCCTGTTACAAAGTTGCAATATAAAATGTT--GCTGTTTCTAAACTGGGAATTTCCTTTCCTAATGGTGAAAATGATCCCTAGTCCTTTAAAATGGATAGTTCTGTACTTTCTAAAATATGGTACACCTAGAGCAATGAGATATGCAG---------------TGTCTTTTCTTCAGGTGCTCATTGGGACGAATTAA------------------CAAA--AGGAGACTGGGAGCATGAGGAAAGAGAAATAGAG------AGATGCCTCTGTGTACTTTATTAACACAGAACTTCAAATAAACATTGGTGGGAGTCTCAATACACTTGAATACACACCATCATCTTTATTTCACAGCTAAGGCCCTGGATTTTGAGAGTACAGGAGAGATTTATCTTCAGAGATAAAATCTCCAGTTTCTCACAATTCACATTCATTTCTCCCATCTTTCTTGAAAGGGTACTCTCTCCTCCCTCCCCAAGAATCACAGATCTGTTCCCTCCTCCCAGCCCCACCCCCT-TTGACTCTCTCTTATTTAACTGACTTTGACATATCTCTAATACTTATTTAGAGCTGCCTGTCACCTCTGTCCACTGCCTCACCCCCTCACAGATGGGTATTTGCTGCTACACAATGTCACCAGGAAATAAGGTATGGATATTAAA--ACAAGTGGCACAGAAGACAGCA chr4 - 94230402 17686686 17686685 17687649 76542754 76542753 76543717 964 TAATAGGCTACA-AATAGCAAAATGCAAGGACAGAGAAACACTGCCAAATATTTGTTATGCCTAACATTTATGTA-CATTTATCTAATCTCAAATATAATACACGCTGACAGTATAAACAGGCCAGCTGAAGCTAATCTGTGCATGTTCCTAGTGTATGTAAA-TAGTCTTTTCCTCAGTTTGTTTCCTTAAAGTATGTAGCAAGCAATTATCTCTTACAGCTACAAAGGCAATGACATGTTACTTAGTACTTTTAATAATGATAAATTCAGTCCTGGTGACGAG---GCTGG-----TGTCAGGCTATCAGGCAGCAGGATAAGATTTTCTGATATACCCCAATAGCAATCTTTCGTTCTGCAAGCT--AACTCAATTTTAACCTTCCCAATTGCTCCATATTGGCCCCTCTTAAACACTGGGCTTCTACAGTCATGATTCATGAAACCACACGCTGAAGACTGT-TGTTCTTCAGGTACTAAATGAGATAAATTAATTCCACTAAATAGAGGACCAAATGAGGAAATCGGGACTA-GAGGAGAGGAAAAGAAAATGTATAAGGCACATCTCTGCATTTCATTAACATTCAACTTCAAAGAAACAGCTGCAAAACTGTTGATACAGTTGATTGCACATCATCATCTTCATATCATGGTTAGATCATTGTATTTTGGGACTACAAGAGAAATCTAACTGGAATGGGAGATTCTCCGATT------AAATGGCCTT--TTCCTTCCACCCTTCTT---CTGATCATTTTTCATGTTTTGATGAGAATAAAATGCCACCCGGCTTTTCCCGGGACAATTTTTTGTCTAATCTTTTCTGTTTAACTTAGGTTGACGTGCCTGTAATACCTATTTAAAACTGCCTCTC-TCTCCATCTAATGCCTCATCCTTTAACAGATGGGTGTTTTCTACTGCACATAGTTATAGGCAGAGCAGCTAAGGAAAATAAAGTGCAGATGGTACAGAATGAAGCA ..x...x::...-..:....x..........::.:...:..:.........x:..:.:...::x:..x..:....-:..........:xx.x.........:xx:x.......xx........:.x:.xx.x..............:.------.....:...-:..:::.xx..:::.:...x..........:......x.xx:.........::..x.:..:.:.:.:..:...............:....:....x........xx.x....xx....:..---...:.-----:::.xx.:..:x.:.:x...:x....:..x..--.x.:.x:.:x..:x.x:.x:..:.x...:xx.x.x.--..x.x.x:::..::.:.::x..x..xx:x:.x:..xx.::...x...:.:x.x:.x:...x..:x....xx:...x.:---------------...-.x..........:..x.x..:..::......------------------....--....:.::....x:.-.....:..::...x.:.:------..:::.x...x..:.:..:.......:xx.........x.....x:x.::::.x.x.::.....x....x.:....:.........:..x...::.:..::x.x:..x......:..x....:....:..:..x..xx.:x.:x.:.x.....::..------..x.x:.x..--..:..:...:.:.....---xx.:.xx.:.:..x.x::.:xx::.....x.x.x::.xx::xx..::....:.xx.x.:::::.-.:x.x...:.::.:.......x.xx.....:.::..x......:......:.:......x..-:...::..:.x.......:..::.x..........:...x..:..:....xx..:.:x:.x.:.xx..x..x...x.x....--:..::...:......x:x.... 12M1D62M1D72M6I9M1D121M3D5M5D32M2I36M2D78M15I3M1D31M18I4M2I15M1D18M6I157M6D10M2D17M3D64M1I62M1D82M2I22M 592/912 64.9% 964/94230402 0.0% 79/912 8.7% 6338072 NA +3602 chr4 + 190214555 24027959 24027958 24028055 97 CCTCACAGCTACGCTCTGAAATAGGTCATATTATTATCATCCCCATTTAATAGGTGAGGAGACTGAGGCTTGGAAAATTAAAGTAACTTAGTCAAAG chr4 - 94230402 10729166 10729165 10729260 83501143 83501142 83501237 95 CCTCACAATACCCCTGTGAGGTAGGTAAT--TACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG .......::xx.x..x...::.....x..--..:.....x.:......x.:.....:.:.:........x::x.x.:x.x......:..:x:..:.. 29M2D66M 65/95 68.4% 95/94230402 0.0% 2/95 2.1% 13298793 NA +15352 chr4 + 190214555 24040378 24040377 24040621 244 CAAAATAAGCAGATGTAATCAAATGCTAATTTAGCAATAAACAGAAAATTGACTTCAAAACATCTCTCTGTCACTCTAATTGATTAACAGTCACATGAAAATTGATAACATGATTTTCAGCAAGAGAGCGT----GTGGCACAAGCTCTTTGG--TTCTATTGGCTTCGGATATTGACTTCCTTCCAAATAAAGCTTTTTAAGAGTACATTAGTGAGTCCACTAATAAACTTAAAAAGCAGTCTAATTAC chr4 - 94230402 17693650 17693649 17693898 76536505 76536504 76536753 249 CAGAATAAACATCTGTGATCAAATACTAATTTAGCACCAA-CAGAAAATTGACTTCAAATCATCTCTTTGTCACTGTAATTGATTAAAAGTCAAATGAAAATTGATAACATGATTTTCTATGTGTGAACGCACACGTGGCACAAACTCTCGAGAGCTCTATTGGCTTCATATATCGACTTTTCTCCAAATACAGCTTTTTAAGAGTACATTAGTCAGTCCACTAATAAACCTAAAATGCAGACTAATTAC ..:.....:..xx...:.......:...........x:..-..................x.......:.......x...........x.....x........................x:::x.x..:..:----.........:....:x:.--:............:x....:.....:::........x......................x...............:.....x....x........ 40M1D90M4I18M2I95M 206/243 84.8% 249/94230402 0.0% 7/243 2.9% 6346728 NA +10719 chr4 + 190214555 24042065 24042064 24042627 563 TTTACCTC--CTTGTAAAGTTTATTATTAATCATTTCAAGTGCCATCTGGACAACTGATAAGTAAATGTCTTCAAAAATCTCTGAAAGAGATTTCTTAAAGTTCTACTGTCTACCAGCCCCGCTCAGCATTCCCATGCCTGATCTCCAAGGATGCCAATATGTATTCAGCTG-TTTTTTATTAAC----ACTGGTGGCTTCATAATA---TTAAAAAATGTATACACCAAGTCACCCCAATAGAAAACAGGCATGGATTGTGATGCAACACAAATTCCACTTCAAATA-----------------GTCATCCTC----TCTGCCTAAATG-----CCTTCTCTGTAGTCCAGAATGAGCATCTTTCTATA------------------------------GATGAAAGAAAGCAAGCAAGCTGAAGTCCAACACTCCAGTGAGCTTGAATCTCTTGAGGTCTCTATCAGTGGCTATTAAAATTTAAAGTGTACTGCATAATCCTTGAT-TCCTGAAAACACATGCTACTTATATTCCTTAAG---CCACTGACAGCTTAAGCTATTCTGTGTGGGAACACAGAGGGGAACAAAGGAGCCAATGCAATAGATACCGGACCAC---------ATAAATGTCAAC chr4 - 94230402 17699637 17699636 17700265 76530138 76530137 76530766 629 TTTACCTTGGCTCTTAACAATTATTATTCAGCATTTCAAGTGCCATCTGTGCTGCTGATAAGTAAATGCCTTCAAGTATATTGGAAACAGATTTTCTGAAGTTTTACCTTGTACCAGGCACAGTCAGCA-TCAGAAGCGTGTGCTCTATGGAAGCTGACATGTATTTAGCTGATTTTTTTTTCACAGGAATTGGTGCATTCAAAATAAATTTAAAATGTGTATAT-CTAAGTTG-CCAAACAGAAAACAGGCTCAGAGAATGAAGGAACAT-CACTGCATTCCCAATAGCACTTGCTCGTTATGGGTCAAATTCAAATTCAGCGTATATGGGTAATGTTCACTCACACCTGGAGTGAATTTAGTCTTATAATAGTTAAGTGCATCCTGAGAGAAAAACTTGTTAAATGAGAAAAAATATCCATAAGTTCACTGCCCAAATGCCTCAACAGCTCTTGACACATACATCAGCCACCACTAAAA-TTAAAATGTGAAATATAATGACTGATCTCCATGAGACGCGTGAGGCTGACTATTCTAAGGTTCTCACTGACAGTTTAAACTACTCGAAGTG-----ACACATGGGAACA---GATCCAGACTCACACATCTCTGCCCACTGTCTTAGTGTAAATGTCAGC .......:--..:x...x:x........x.x..................x:.x:..............:......:x..x.:x....x......::.:.....:...:x.x......x.x.:x......-..xx.x..x..xx...:.x...x..::.:.......:.....-......x..x..----.:.....xx....x....---......x:......:-.:....::-..x..:...........x::..xx:...x.x....:-x.:.x..:.:.x....-----------------....xx:..----..x..x..x...-----:x...x..xxx::.::..:...::x.xx.::....------------------------------.x.:..x..:.:x..::.xx.xx....:..x::.:.x.:..xx::x:x.x.......x::x.x:.....:x:.:.:.....-.....:...:xx::.....xx:....-...xx:.:..:.:..xx:..x.:xx.:..x.:.---:.........:....:...:..x:x...-----...x.x.......---..x...:xx:x.:.x..x:.x.x....---------:.........:. 8M2I119M1D42M1I12M4I18M3I15M1D8M1D36M1D16M17I9M4I12M5I35M30I81M1D26M1I33M3I28M5D13M3D27M9I12M 368/550 66.9% 629/94230402 0.0% 92/550 16.7% 6342428 NA +9548 chr4 + 190214555 24042065 24042064 24042343 279 TTTACCTC--CTTGTAAAGTTTATTATTAATCATTTCAAGTGCCATCTGGACAACTGATAAGTAAATGTCTTCAAAAATCTCTGAAAGAGATTTCTTAAAGTTCTACTGTCTACCAGCCCCGCTCAGCATTCCCATGCCTGATCTCCAAGGATGCCAATATGTATTCAGCTG-TTTTTTATTAAC----ACTGGTGGCTTCATAATA---TTAAAAAATGTATACACCAAGTCACCCCAATAGAAAACAGGCATGGATTGTGATGCAACACAAATTCCACTTCAAATAG chr4 - 94230402 17698576 17698575 17698860 76531543 76531542 76531827 285 TTTACCTTGGCTCTTAACAATTATTATTCAGCATTTCAAGTGCCATCTGTGCTGCTGATAAGTAAATGCCTTCAAGTATATTGGAAACAGATTTTCTGAAGTTTTACCTTGTACCAGGCACAGTCAGCA-TCAGAAGCGTGTGCTCTATGGAAGCTGACATGTATTTAGCTGATTTTTTTTTCACAGGAATTGGTGCATTCAAAATAAATTTAAAATGTGTATAT-CTAAGTTG-CCAAACAGAAAACAGGCTCATAGAATGAAGGAACAT-CACTGCATTCCCAATAG .......:--..:x...x:x........x.x..................x:.x:..............:......:x..x.:x....x......::.:.....:...:x.x......x.x.:x......-..xx.x..x..xx...:.x...x..::.:.......:.....-......x..x..----.:.....xx....x....---......x:......:-.:....::-..x..:...........x::x.xx:...x.x....:-x.:.x..:.:.x..... 8M2I119M1D42M1I12M4I18M3I15M1D8M1D36M1D17M 202/275 73.5% 285/94230402 0.0% 14/275 5.1% 6343489 NA +9077 chr4 + 190214555 24043985 24043984 24044290 306 TTCTGAGTATATCATCCATGTAGATCAATGTGGCCTGGAAATGCCATAAGTGTACGCTGGCTTTCACTTAACAAAGAGCGTCAAATTGGGTCACTACACTACCACTAATTGCATTCTAAGAGATGTCAACCGTAACGCCTAGGCTGAAGCTCCTTCAAG-AAGATGGCAGTTGAGTCTAAACAAGAACCCCTGCTGCCTTTACCAAAGGAACTGAGTCTGGCTTTTCCACAGCCTCCTTTTCAGCTTTCCTGAGCATTCACT------------TACATAAAAAGCAAATGAGACGCCACTTTGTCATCCTGGTCACAG chr4 - 94230402 17700977 17700976 17701289 76529114 76529113 76529426 313 TTCGGAGCCTCTTTTCTATGCAGGTCTGTTTGGCCTGGAAACAGCATACATATACACTGACTGGAGTTTAACAAAGAATGTTAATTTGGGTCAGTGAACTACCACTAATTGAATTCTAATAGATGTC-ACCATAACTCAAGTGCTCCAGCTCTATCAAGCAAAATGGCAGTAAGACCGAAGCCGGCACTTCTACTGC----ACTGGGGGAAATAAAGTCTGCCCTTCGACTGCATTGTTTCCTGCTTGTCC-AGTTTTAACTACTCTTTGGTCATAATAAAAAAGCAAATGAGAGACTGGCTTGACAGCTCCCTCAAAG ...x...:x.x.:x..:...:..:..x:.x...........::x....x:.:...:...:..xxx::..........::..:..x........x.:x..............x.......x.......-...:....x.xx:x...xx.....:x.....-..:........x::::.x..:.x:.x..::..:....----..::::....x.:.:x::x..::...x..x..x.:x...:.x....x:.:-..:x..x...------------..xxx...............x:.::x:...x..x.::xx...x.. 127M1D31M1I37M4D50M1D10M12I45M 200/300 66.7% 313/94230402 0.0% 19/300 6.3% 6343008 NA +3682 chr4 + 190214555 24050253 24050252 24050342 90 TGGCATGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......x..x..------..:..:..:xx:x..:.::..........x...x.xx.x........::.............:....x.:.. 12M6D72M 62/84 73.8% 84/94230402 0.0% 6/84 7.1% 5853139 NA +19512 chr4 + 190214555 24057713 24057712 24058600 888 AATCCCAGAATGCAAAGCAATATGAAATGG-ATTCACTTCTTTTGCAGTGAGATGAGCCTCTTTGGAAGCTCAATACAGGTAGCGAGCTGAGTAGGCCCAGTGTGGTGGTGGCGAGACACAGCACTCAGGGAATTGCTCCAGCAATTGGAAAA--CTGTTTTAATTAGTTTGGTTGGTTGGTGGTTCCCAAAGCAATGGGCTCTGAGCAGAAGGCAGGGGGAACGCATGTATGCATTTGAGCATGCTCATGCATGGGAGAGAGAGAGGGAAGCGAGTGATTGATTGGAGAGAAGGGAAGCAACCTGCTGGAAACAGCCCCTGGTGCTCTGAGCACAGGATTCATTTGAAACAGACAGCGAACTCTTGTACTTTTGGACCTTAAAAGCCAATAGCATCTTCACGTGGTACCCAGTGAGAAGCCCCGCCCCAGAGGGGTGGCCTGGGGGCCGGCCCATCGCTCCTGCTCTTCCTCAGCTGACTCTTGACTGCTTTATGAAGTCTAGGAAGGCA------------GGGGAGGTGAGTATCTCATGGTCCAAGGCTAATCACAATAAT------------------AAACCTCCAAGAACAAAATTGACTGAAAAGAATAAAATTTTTAA---AGTGAGACAGTTCTCTGTCATTTCTGTCTTGGATTATGTTGGGGAAGGTTGAACTCAATTTTATTGAGAAATCAATTGTAATTTGGCACTCTGCATGATCCCTGGCAGAGGACGCTGGTAACAGTCTCTCCTGAAATCTGCAAGCTAATTTACTTCTGCCGCCTACACACTCACAAAC--AAGCCCGAA-----------TTAGAGAC-CCTCTTCCCACCACATACCCAGGCAGCCATTGATTTGTGGCCC---CCTCCTCTTGTTTATGAGATAAA-CAGTAAATTTGAAAAGGGAAACAAAAGGGACAA chr4 - 94230402 17709403 17709402 17710196 76520207 76520206 76521000 794 AATTTAAGAAT-TAAAGCCACATTAGAAGGTATTGATTTTCATTACAGTAAGATGAGCCTCTTCGGGAGCTGGATGGAGGTAGTGAACTGAGCAGACACAGCATGATTCTGGCGAGGTGGAGCATTTGGGGAATTGCTCCCGCAATAGGAAAAATTTGTTTTAATTAG----GTTGGTTGGTGGTTCCCAAAGCAACATGCTGTGAG----------------------------------------------TGGGAAGGAGAAATGAG--------------------GATGGGA---------CCGCAAGCAGCTTGTTGTGTTCTCAGCCTCTGACTCA----GAGCA--CGGCTGGCTCTGCTGCTGGAGGAGCTT----------------------TGGCAC-----GAG-------------GAGGGGCGAGAAGGTGACCAGCAGATGTCCCTTCCCCTTACTGTCCTGA------ACTG-TGCATAAAAGC-AAGATGACATTTTATTCTCCTGGACAAGCGAAAA------GATTCGAGGAAGGAGATAATAACCAGCAATTAGGGCAGCAAAAATATCCAAGAACAAAACTGACCGAAAATAATAGAATTAAAAAGTGAGTTAGAGAGATTT-TGTCATT-CTGTCTTAGATTATGTTGAGGA-GGCTGAACTCAATTTTATTGAGAAATCAATTCTAATTTGGCACTCCGCTCGGTTTCTGGCAGAGGACACTGGTAACAGTCTCCATTGAAATCTGCCAGCTAATTTACTTCTGCTGACTTTACACTAACAAACAGAAGCAGGAAAAAGTCGTGTGGTAGAGATGACATTTCCCTCTAAATATCCCA-----CACCAATACGCCGCCCGAGCCCTCCCATGCTTGCCACAGAAACCCATCACCTTGCAAAAGGGGAAGGGAAGAACAA ...::x.....-:.....x.:..x.:.x..-...x.:..::x..:....:.............:..:....x:..:x......:..:.....:..:.x...::..:.xx.......:::x....:.::............x.....x......--:............----........................::x...x....----------------------------------------------.....::....:.x.::--------------------..x....---------.:.x..:....::x.x...:...x...x:xx..:...----:.:..--.:..x::....xx.:..xxx...x...----------------------...:..-----...-------------......:.:xxx..x.:..:..xx..xx.:.:.x.:...x..xxx....------....-.x:..:..:x.-.:..x.:..------------..:x.:.:..:x.------.:.:.:...xx::xx.:.....:------------------...:x.............:....:.....x....:....xxx..---...x...x..x.:.-.......-.......:..........:...-..:............................x.............:..x:.:.::............:..............:x:..........x.................:.x..x:.....x......--....xx...-----------x......:-x.x:.....x.:.x...:..x:-----..:::..x:.:x....---..::.:.x..:..::x.x.x...-.x:.x.x:...x...:..::.x:::.:.:.... 11M1D18M1I122M2I13M4D35M46D17M20D7M9D37M4D5M2D27M22D6M5D3M13D49M6D4M1D11M1D9M12I13M6D23M18I44M3I14M1D7M1D22M1D132M2I9M11I8M1I22M5D16M3I23M1I33M 536/740 72.4% 794/94230402 0.0% 202/740 27.3% 6348310 NA +3327 chr4 + 190214555 24066822 24066821 24066878 57 TTTGTTTTTGTTTTTTGTTTGTTTTGGGTTTTTTTTTTTTTTTTTTTTTTGCCTTTA chr4 - 94230402 37691314 37691313 37691370 56539033 56539032 56539089 57 TTTGTGGGTGTTTTTTTTTTGTTTTGGGGTGTTTTTTTTTTTTTTTTTGCGTTCTTA .....xxx........x...........x.x.................x:.:::... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -13624492 -80605910 +3103 chr4 + 190214555 24066833 24066832 24066895 63 TTTTTGTTTGTTTTGGGTTTTTTTTTTTTTTTTTTTTTTGCCTTTAGATATTGTGCCACTGAA chr4 - 94230402 89420946 89420945 89421008 4809395 4809394 4809457 63 TTTTTGTTTGTTTGGGGATTTTCTTTTTTTCTTTTTTTTTTCTCCACATTTATCATCATTAAA .............x...x....:.......:........x:..::.x..x.xx:::..:.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -65354113 -28876289 +30532 chr4 + 190214555 24066890 24066889 24067832 943 ACTGAAACCTAGTTTAAGACAAATGCCATTTTAATTTGCTTTAGGCGGTGAAGGCCAACACACATTTCAGTGGAGAAAGCTATGTGTTTTAATTGCCTTATGAAGACATAGCATATGCCCTGACACAGTTAAATGATTAACAGATTACTCCAAATGTCTTTGGCATAGAATATCTATACGTTCATTAGGCAGAACAATTTATCTTCTTGATAAAACTAAAATTACTTATACATCAGATTTACTTTCCATGATTAATAAATGATAAAAATCTAA-------ATCTGAAATG--TGTCTTCTTGGCCATTAATCTCACATTTATCAGCTTCTATAATACATATTATTAATATAAAAATTCAATTT--TCAAAGCATTTAAATT---TGCTAAGAGA-AACAGAACAC----AATGCAAACAAGCATCTCA--------------ATTAGTAGGAAATGCTATAGTC---ATTCTGAAATAGGTAATAGACA---GAGTTAGCTTTAAATATGCTTTATAA-AAACAGATAAAATCCATGGGATACACAGACATCAAAATGCCCCCA-AAGGGACGCCTC-TCTCAAATATACTTCCAGTAGGAAGCCATCAGCATTAATAGCAAGTTTGGTATCATTCCGCGTATGCTCAAAAGGACAACATGAAGATCTGGCTCAGAAACAGAGCACAGAACACGCAGATCTGGAATCACTAAAGGTCAAAATGCAAGCATCGCACGTGGCCAAGGAAGTGAGCTTCGGAGGCACAGGTTTAGCTAGAGGGAAAGCCTAGGGAATTAGATCCTTCTGTCAGCTTTTTTAAATGTTTAAGACCGTCTGTCCTCCAATTAAACTGATCAAGG-GGTCCAGGATGGTTTGTTAGCAACTCTGCTCTGGAGAACACTCATTAAAAGTCTCGAAGCTGATTACGGAGTTCCCATCTCGAGCACTTCACTTCTGCTGTCAGCTGCTGATTTCTCTGAATTCCA chr4 - 94230402 17712932 17712931 17713848 76516555 76516554 76517471 917 ACAGAAGCGTATTTTAAGACAAATGCTGTTCTAATTTGCTGTAGGCACTGAAGACCAACACACATTTCAGTAGAGGAAGTTATGTGTTTTAATTGGTTTATGAAGACAAAGCATATGCCATGACACAGTTAAATGATTAACAGATTCCTACGAATGCCTTTGGCATAGAATATCTATACATTCATTAGCTGGAACAATTCATCTTCTTGATAAAACTAAAATTAGTTATACAGCAGGTTTACTTTTTATGATTAATAAATGATAAAAATCTAAATTATCCATCTCAAATGACTGCTTTCTTAGCCATTAATCTCACATTTATCAGCTCCTATAACTCACAGTATTAGT-TGAAAAATCAATTTCCTCAAATATTTTTAATTCCGTATTAAGAAATAGCAAAATACGTGAAATGTG---AAGTATCTTATCCTTCACTACAGTATTTGCAGTGAATTCTA-AATCAAGATATAAAAAGAAACAATATACAACTGTGTCCCTATTATAAATGTCAAAAAAGAAAAAGGCAAAAGCAA----ATGCTCAGTAATAAACCAGCTCTAACAAAAGATGTATCAGCTCATTTGGATTTT--------------------------CCAGCTTCCTATAGTTCT---TTTGCCAAG-----------GAAAATCCAGCTC----ATTCTGCAGAAAAAAC-----------ATGGTAAAAGGTCAAAAGTACAGCACTGTCTGCATCCTGGGGAGCGGGTTGACACATCACAGGTTTAGCTAGAGGGAAAAGGTTGGGAA-TAGATCCTTCTGTCAGCTATTTAAAATGTTGAAGGCCTTCTGTCCTCCAATTAAAGTGATCAGGGAAGTCTACGAGAGCTAGCT--CCCCACGGCTGTGCATCACTCCCCTT-AAAGTCCAAGGGCTTAGTA-AGACATCTTACTTAAGTCATGTCATTTCTGTTGTCAAATGGTGATTACCTCTAATTCCA ..x...:.x..x..............::..:.........x.....:x.....:.................:...:...:...............x:...........x..........x..........................x..x.:....:......................:........x::........:........................x.......x...:........::..........................-------....x.....--..::.....:.........................:......:x..:.x.....:.-.:....x.......--.....xxx...x....---.::.....:.-.:..:..:..----....::---...:....:.--------------...x.:..x:...x...-.:..---..x:x:...x.:::....x...---.x..:xx:x...x.x...::xx.x..-...x..::....x.x.----..:.x...xx..x..xxx..:.:x.-..::..:.:x..-x....xx.:x.:..:--------------------------.x..:..xx...x:...:---.x...:x.:-----------...:...::....----.:xxx...x.:..x..-----------..x::x...........xxxx....::.:x:.::x..x:..:..:.:.:.xxx:x:x......................:xx.x.....-..................x...x.......x...:..x.................x......:..-:...:.x..x:.:.x.:.--.xx.x.x...x..x.xx..x.:.x..-......:x:::...x.x..-:..xx..::.::.x::x..:x...:.....:.....:x..x.....x.:::x....... 273M7I10M2I56M1D14M2I16M3I10M1I10M4I6M3D10M14I17M1D4M3I22M3I26M1I16M4D25M1I12M1I15M26D18M3D9M11D13M4D16M11D89M1D65M1I18M2D26M1D19M1D59M 650/874 74.4% 917/94230402 0.0% 112/874 12.8% 6353958 NA +3190 chr4 + 190214555 24076234 24076233 24076322 89 TAATCCCATTTTACAGATGAGAAAACCAAAGCTTGAAATAGATGAAGCAGCTTGCCCAAGGTCAGACATCTAATCTGTGGAGGAGTCAG chr4 - 94230402 80987865 80987864 80987952 13242451 13242450 13242538 88 TATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAGGT-GAGTCAGTGGCAGAGCTGG ..x:..:............:.:....::.:..x.x.:.x..::x.x.:::..............x.x:.-x.:..x....x:...:::. 69M1D19M 58/88 65.9% 88/94230402 0.0% 1/88 1.1% -56911631 -37318771 +30167 chr4 + 190214555 24090551 24090550 24091686 1136 CTGCTATAGACAAAATGGAAAATCAGAGTTTCAC------TTTATCCAACATCATCCCTAAGAAATGCTTCATACACAGAAGTGTTCTTTTTTCCATACGCC--------AGCAGCATTATTAAAAAAGAAACAGAAAAAAAGCTC--TGGCATCAGTCTTCAATATTGTTGTCTAATTAAATGGCAACGCAGTGGATGCGTAAAAATATGCATTAGAGGTGTGTAATGTGTAATGTGAAGAAGAGTAATCCAAGCCATTCAACAGGATTTAGGAAGGGATTTCAGCTGGCAGCTTACGAGACAGGAGCATATAATTTTGCTAATTTGAAATAGGTATTGTAACGTATAAACATTACTGCTTTGCACATTTTAATGAAAACTGCTTCTACACCAAAATGAATCCTTTAGCTTGAACTCTCTGCATACCACAGAGCTTCTACCTATTATGAGTTCAGCATAAATAAGGAAGGCACGCAAGCTGCATTAAAAGAATGGTCACCTCATTAAAAATAGGTTAAAACCAAGCCCCTATTCTAAGCTACCATAACACCATAAAGTAAGTCTGATGACAGGTGTTGTATTAAATTTTTATATCGCAATGAACTTATACTCACACAAACCAAATCTGCATGTTTCCCTTGATAT--------ACACCTGCAACTTGTTAATTCAAGAAACTTTATTAAGAAAGCATAAATTTAGCAACACCTATAGATTTGTAAAGCCCTATTAGCTTGCTTGACAATCTAGAGTAAATGTATTTGGGGTCTTACTTGCATGGTTTGCAAAGACGT--GGACACTACCCATGACTTTTTTCAAAAGGACGTGCTTGCAGATAGCACAGTTCCACAAATTGATGTACGCATATTACCTAGACTTGGAGCCAAAAGAGTTGAGAGAGATTTGGGTCCTGTGTGGAGCTGA---------------------GGACATCACTTACCTGCCAGCCTGCTTCTCGCTGAAGTACTTTTTTCCAGTCTTCTTCCAG------------CCTTGGGGAGGTCTCATCCATTGCTGATGCTGCTTGCACAAACTGGATTCGCCAGCGGCTGTTACTCTCTCTCCTTGCAAGCTTTTACCAAAGCAGCAGCCAGGGCAGTCCAGGGGCAGACTGTCATGGAGAAAATGCCATGCCAGAGGAT--GAGGGATCGGGCAGGAAGAA chr4 - 94230402 17722387 17722386 17723493 76506910 76506909 76508016 1107 CTGATAAAGACAAATC---AAATCAACACTTCATCTGAATTTTGTATAATGGCATCACCAAAATA----------ATAATAATAATCTTCTTTAAAAATCCCTCGTAAGAAGCAGCA------AGGGGGAAAAAAAGAAATAACTTGGTGACACATCTCTTGAATATTGTTGATTGACTAATTAA-AATGCAATAGA-GCAGAAAAAAGTGCACAGACGATGCTTAGGATATAATGTAAAGA---GCAATCACAACCACTCAGTGGGGCTTAGCAGG---TCTGAAATGGTATCT------------------AATTCTACAAACTCCAGAAAGGTACTGCATAATGTAAACATTATTGCTTTGCACACTTTAATGAAAACTGCCT---------------GCCTTCGGATTGAATTGCATGCATGTC--------------TATTGTGAGTCCAGTATAA-TAAAGAAAACAGGCATTGTGCATTTAAAGA--TGTTGCTTCTTTAGAAG-AGGCTAAAAAGAAACCCCTTGCTACAGTTACTATGACACAATTAAGTAA-CAGGATGACAGGTGTTGTATTGTATTTTT-TAATGGAATAAACTTGCATATATACACACAGCAGCCACGTATTTCCTTTGATATTACAGCATGCACCTGCAACTTGTTATTGCAAGGACCTTTTTCAAGCGAGTGTACATTTCGTAATGCCTGCAGATTTATAAAACTCTATTTGCTTCTCCTACAATTTGGAATAGATGGCTTTGGAATCCTACAACTACTCTTTCCAAGAAAATAAGAGCAC-AATGATCACTGGTCTCCCAGGAATATGCTCTCAGGCATCGCTGCGCTACAAAC--AAACACACGTTTCACCTACGCTTCG-GTTAAAAAAGTTGAGAGATTTTTAG----TGCTTAGATTTAATCCACTTGCAAGCATTCGTCTTTGTATCACTAACCTGCCAGCTAGCTTCCCGTCGCAGCCCTTTTATCCAGTTTTCTTCTAAGTCCTTATTCTCTCTGGTGGATGTTTCATCCATAGCTGATGTAGCTTGCACAAACTCGATTGGCCACTGGCTGTTACACTCTCT--TTGTAAGCCTTTACCAAGGCGGCAGCAAGTGCAGTTCGGAGACAGGCTGTCATGAAGGAAATGTCACAGCACAGGCTGGGAGGAGGGGGGCgaggggaa ...x..x.......x:---......:x::....:------...:.x:..::x....x.:..:.x.----------.:.:x.:.:x....:...xx.x.:x..--------.......------.::::....x.:.:...x.:..:--..:..:xxx....x..........x:.:.:...x.::-..:...:.:..-..:x.....x:....:x::x.:..:x..:x:.:......:....---.:....xx.:...:...:::..::....x.:.---.:.x.:x...:.x..------------------....:.:.x..:.:x.:.x.....:..:.xx:.:.........:...........:...............:.---------------x....::.x.....:.x:x.....::.--------------....:.....:...:....-...:...::..x...xxx......x.....--x..::.:..x...:..:-...:.....xx..:.....xx::xx..:...:..:....x..x......-:xx..................:x......-..x:.x...:.....::.:x:.:...x..x:x.x.::.:.:.....:.......--------:................x.x....:.x....x.:...x:..::..x....x.:..::...::......:....:.:.....x....x:::x.....:.:..:..:...xx.....::..:...xxx:.:xx...x...::.x:.--.::...-.x:x..x...xx.:..xx.:.:.::....:x...::.x.:.x.:x.:.....:--.x::..:.:.x.:.....x:...x.-.::....:..........xx...:.----..:x.:..x:.:.---------------------xx::......x..........:x.....:..::.x..:x.....x......:......:.:------------:..x.x...x..:........x.......:x.............x....x....x:.........x......--...:....:........:..:.....x..x.....:.:.:.:...:........:..:.....:..::x..x...x.--....::xx....::.::... 16M3D15M6I25M10D27M8I7M6D23M2I37M1D11M1D44M3D32M3D15M18D73M15D27M14D19M1D30M2D17M1D49M1D29M1D54M8I144M2I6M1D53M2D25M1D25M4D13M21I61M12I72M2D77M2I20M 716/1046 68.5% 1107/94230402 0.0% 151/1046 14.4% 6368164 NA +11662 chr4 + 190214555 24091391 24091390 24091686 296 ACGCATATTACCTAGACTTGGAGCCAAAAGAGTTGAGAGAGATTTGGGTCCTGTGTGGAGCTGAG---------------------GACATCACTTACCTGCCAGCCTGCTTCTCGCTGAAGTACTTTTTTCCAGTCTTCTTCCAG------------CCTTGGGGAGGTCTCATCCATTGCTGATGCTGCTTGCACAAACTGGATTCGCCAGCGGCTGTTACTCTCTCTCCTTGCAAGCTTTTACCAAAGCAGCAGCCAGGGCAGTCCAGGGGCAGACTGTCATGGAGAAAATGCCATGCCAGAGGAT--GAGGGATCGGGCAGGAAGAA chr4 - 94230402 17726814 17726813 17727137 76503266 76503265 76503589 324 ACACGTTTCACCTACGCTTCG-GTTAAAAAAGTTGAGAGATTTTTAG----TGCTTAGATTTAATCCACTTGCAAGCATTCGTCTTTGTATCACTAACCTGCCAGCTAGCTTCCCGTCGCAGCCCTTTTATCCAGTTTTCTTCTAAGTCCTTATTCTCTCTGGTGGATGTTTCATCCATAGCTGATGTAGCTTGCACAAACTCGATTGGCCACTGGCTGTTACACTCTCT--TTGTAAGCCTTTACCAAGGCGGCAGCAAGTGCAGTTCGGAGACAGGCTGTCATGAAGGAAATGTCACAGCACAGGCTGGGAGGAGGGGGGCgaggggaa ..:.:.x.:.....x:...x.-.::....:..........xx...:.----..:x.:..x:.:.x---------------------x::......x..........:x.....:..::.x..:x.....x......:......:.:------------:..x.x...x..:........x.......:x.............x....x....x:.........x......--...:....:........:..:.....x..x.....:.:.:.:...:........:..:.....:..::x..x...x.--....::xx....::.::... 21M1D25M4D14M21I60M12I72M2D77M2I20M 213/289 73.7% 324/94230402 0.0% 42/289 14.5% 6364577 NA +14345 chr4 + 190214555 24098479 24098478 24099023 545 AAAAGAACATAATAAACCAGGAAGGACTTTTTCTTAAC-CTACTCAAAATGAACAGAGATAGAAAGCAAAAGACCCAAATATTCAAAC----CAAGAAACAGAATCCATTTCAATACTTAAGTGTACTTATATCGCTTAAGTGAGAAATAACCTGGCTGTCACTACAAACATTATATTTTGTATGAATCTGAGCCA-TGTAGATGCCAATTAATTACTGCATGGCATTACTATGTCTTTCT-ATAACTGTGTAATAATACCAACTGACTGTGATCAGAAGGATTTAGTAGACATTTATTAATGGAAATCAGATGACTT----CATCCACAGTGTCTAAATTACTTTGACATGTTTGTGCCCGAAGCAAA-ATAATGTAATAAAAAACAACATATAGATGAGAACCTCAATTTTTCTGTACATATGAATCTGTCACTGATTTGCAAAGAATCAAATATAAGTCCAACCAGGTGAAGACATTCAATACATCATCCTTCCCAATTCAGTATAAAACTAATACTGGCCTTTCCAGTATGTTTATATCCTGTTCCTGACTTT chr4 - 94230402 17725545 17725544 17726078 76504325 76504324 76504858 534 AAATAAACAAAAAGAAGCAGCAGGAATTCTTTTCTGACTCTGCATATGGCAAAGACAGATGCAAACCAACATACCAGCATATTCTTACTGGGCCAGGAGCATAAT-----TCTAAATCTAAG---ACAGATACTGCACA-----GAAAGTGCTCGATGGTAATTGTAAATATTAGCAATGCTTCAAATCTAATCTGCTCTGGATTGCAATGAATTATTTCGTGACTTTCACTTGTCTTTTTCACAGCCATGAAACAGCACAAATTGTGTGTGAGCTGCAAGAATATGAAGACATTTATTGATGGAAATCAAACCACTTTTTTCACTCACAGTGTCT--------TTGATATGTTAGAGCCTGAAGCAAAGAAAACATAATAAAAA-CAATATATAGATGAGAACTTCAATTTTCCCCTACATATGAATCTGTCACTTATTTGCTAAGAATCATATCTAACTCCACAGAGTTAAAGAAGCTCCATATATCATTCTCCATAATGCAGTACTCAGCTCA-AATGTACCTTTCATGAAGTTCATACAACATACTTGATTTT ...x:....x..x:..x...x.:.:.:.:...::.:..-..:.x:.x::::..x.x....:x...x...x.x...x:x......xx..----.x..:.:..x...-----..x.x.::....---..xx...::..x:.-----....xx:.::.::x..x.:.::...:....xxxx.xx.x::.....:.x.::-.x.:...xx....x.....:.x.:..:.x..xx:x.......:.-.:.:.::..x..:.::..x..:..xx.....x.x.x.:..x.xx.x...........:..........:.:x....----..::..........--------....:.....x.x...:........-.x..::.........-...:..............:........:.:x...................x......x........x..x...x....xxx..x.:....x::..x...:.....:..:.x:...x.....:xx.:..x.-.x..xx.:..:..xx.x...:...:xx::.x.:...:... 38M1I49M4I13M5D12M3D14M5D52M1I44M1I76M4I14M8D25M1I15M1D130M1D40M 353/522 67.6% 534/94230402 0.0% 35/522 6.7% 6372934 NA +14437 chr4 + 190214555 24098479 24098478 24099023 545 AAAAGAACATAATAAACCAGGAAGGACTTTTTCTTAAC-CTACTCAAAATGAACAGAGATAGAAAGCAAAAGACCCAAATATTCAAAC----CAAGAAACAGAATCCATTTCAATACTTAAGTGTACTTATATCGCTTAAGTGAGAAATAACCTGGCTGTCACTACAAACATTATATTTTGTATGAATCTGAGCCA-TGTAGATGCCAATTAATTACTGCATGGCATTACTATGTCTTTCT-ATAACTGTGTAATAATACCAACTGACTGTGATCAGAAGGATTTAGTAGACATTTATTAATGGAAATCAGATGACTT-----CATCCACAGTGTCTAAATTACTTTGACATGTTTGTGCCCGAAGCAAA-ATAATGTAATAAAAAACAACATATAGATGAGAACCTCAATTTTTCTGTACATATGAATCTGTCACTGATTTGCAAAGAATCAAATATAAGTCCAACCAGGTGAAGACATTCAATACATCATCCTTCCCAATTCAGTATAAAACTAATACTGGCCTTTCCAGTATGTTTATATCCTGTTCCTGACTTT chr4 - 94230402 17729112 17729111 17729646 76500757 76500756 76501291 535 AAATAAACAAAAAGAAGCAGCAGGAATTCTTTTCTGACTCTGCATATGGCAAAGACAGATGCAAACCAACATACCAGCATATTCTTACTGGGCCAGGAGCATAAT-----TCTAAATCTAAG---ACAGATACTGCACA-----GAAAGTGCTCGATGGTAATTGTAAATATTAGCAATGCTTCAAATCTAATCTGCTCTGGATTGCAATGAATTATTTCGTGACTTTCACTTGTCTTTTTCACAGCCATGAAACAGCACAAATTGTGTGTGAGCTGCAAGAATATGAAGACATTTATTGATGGAAATCAAACCACTTTTTTTCACTCACAGTGTCT--------TTGATATGTTAGAGCCTGAAGCAAAGAAAACATAATAAAAA-CAATATATAGATGAGAACTTCAATTTTCCCCTACATATGAATCTGTCACTTATTTGCTAAGAATCATATCTAACTCCACAGAGTTAAAGAAGCTCCATATATCATTCTTCATAATGCAGTACTCAGCTCA-AATGTACCTTTCATGAAGTTCATACAACATACTTGATTTT ...x:....x..x:..x...x.:.:.:.:...::.:..-..:.x:.x::::..x.x....:x...x...x.x...x:x......xx..----.x..:.:..x...-----..x.x.::....---..xx...::..x:.-----....xx:.::.::x..x.:.::...:....xxxx.xx.x::.....:.x.::-.x.:...xx....x.....:.x.:..:.x..xx:x.......:.-.:.:.::..x..:.::..x..:..xx.....x.x.x.:..x.xx.x...........:..........:.:x....-----..::..........--------....:.....x.x...:........-.x..::.........-...:..............:........:.:x...................x......x........x..x...x....xxx..x.:....x::..x...:.....:....x:...x.....:xx.:..x.-.x..xx.:..:..xx.x...:...:xx::.x.:...:... 38M1I49M4I13M5D12M3D14M5D52M1I44M1I76M5I14M8D25M1I15M1D130M1D40M 354/522 67.8% 535/94230402 0.0% 36/522 6.9% 6369367 NA +14844 chr4 + 190214555 24100480 24100479 24100781 302 CCCAACACCTTCGACATACGTGGCTATTCCACTTAATAGTTCAGAAAAACAGCTGATGACAAGTGCATGACGC-CGCCTCTGGACGTTCAGATGACTGATTTTGTATAAATCAATATTGAGTGCCACAAAATGTCAGAAAATACCAAATGAGGAGAAAAGAATCAATAGATAACCTTGGAATTAAATGAGTGATGAATAATCTTTACCAACTAAAATAAATTAAACTATGAAAACC---AGGTTAAAGCAATATCAAGGGTCTGGCATAAAACCACAAAAAAATATATAATTTACAGGTAAGGCCG chr4 - 94230402 17732399 17732398 17732701 76497702 76497701 76498004 303 CTTAACAGACTGGATGTACACGGCTGTTAAATTTATTAGTTAAGAAAAACAGCAAATGACAAGTGAATAAAGCACTCCTTGGGACGTTTGGACTACGGATTTTGTATAAATCAATAGCAAGTGTTATAAAATGTCAGAAAATACCAAATGAGGAGAAAGGAATCAATAGGTACCTTCTGAATTAAATGAGTGATGAATATTCTTTACCAAGCAAAATAAATTAAAATAGAAAACCCCTTATGTTAAAGCAATACCCC-ACTCTTACTTGAAGCCCCAAAGGA--AGGTAATTCAGGGCTAAGGCTG .::....xx:.x..::...::....:..xx.:...x.....x...........x:..........x..:.x..-.x...:x.......::..:x..x...................x::....::.:...............................:..........:..x.:.:x.....................x..........x:.............x..x:...x..---.x............:.xx-:x...x:.x.:..:..x....::.--.x:.....:.x:.x......:. 73M1I162M3I18M1D24M2D22M 230/299 76.9% 303/94230402 0.0% 7/299 2.3% 6368081 NA +3069 chr4 + 190214555 24104879 24104878 24104956 78 CTGCAGTTCACCAGCTGTGTAACTTTGGGCAATTTACTTCCCTTCCCTGAGCCTCAATTTCATCATCTGGAAAATGGG chr4 - 94230402 42976369 42976368 42976446 51253957 51253956 51254034 78 CTGCGGTAGACCTGTTGGGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGG ....:..xx...x.:..x..:.:::..x.:..x.:.....x.:..::x::....:x:....x.:x............. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -18871490 -75358912 +49491 chr4 + 190214555 24114501 24114500 24115385 885 GAGTGGTGGCAGCTCCACACTCCAAACGAGGTTCCTTCCTGAGTCTGACAACTCAGGGACTCATTCTTTCATTCCCATTTGCCT-CAAATCACAGCCTCCCGGCATGCCTTCTGGACAACATTTACGCAGGGTTGAATATATGGCTCACATTAGAACAAACAGAACTTCCTAAATTGGGCAATTTGTGACTTTGCACCTCAAGTTTCACTCATCCCTGATTCAGAATGCACTAAAAGCACATTATTACTGTTTAGGATGCAAACTACTGCCCTGAAAAATATTGCTCTTTACCTGAGGTGAAACAAGTTATAAATTAATGGTTAGTGGAGGGTAAGGTGCGTGGGTAAATAGAAATTCCTTAGAATCTTGTGTAGGCCATTCTACTAACATGATGAGGCTACATTTGCTG--TGGATTAATTACC--TTTTCTTCTAACTTAATTTATTTCATACTTTAAGAAACCAAAATGTCCAGTAGCCACTATGCTTGCGACAAAGAAACACAATAAAAGCAATTTCTCCAGTA--------------CAAAAAAATAAAGCATTCCCGGTAATGCATTTTTGAATCCAGCATACCTTCCCCTAATGAGGTTTCAGCATGCTATAAATAACACTAATGAGACTTTGTCTTGCCCATGTAATATATTTCCTTGATATAGCCTTAGATTCTC-CGTGTTGCATGGAAAACTAACAGCCTCAGAAAGAAATGTCATCCAATAACACATTAAAACGAAAAGCACAATTAAATATAAATGAATTCAGTAATTTAATTGCACAATTGTCGCTTTAAAAAATTCAGAAGAAATGTAATGATGTCATTTTTTTAAATCGGTAAATAATAAAAGTGCTTGTGGGGATGGTACAATATTTAAATAAACATTTTTCTGGCAA chr4 - 94230402 17741427 17741426 17742321 76488082 76488081 76488976 895 GAACGATGGTGCCCTCACAC----AACGACTTTTCTGTCTGAGACTGACAATTCAGGGACTC-TCCTTTTGTTCTCATTTACTTGCAAACAATGTATGCCTTGTATGCCTACCACATAATATTTACGGAGGACTGGATATATAGCTCTCATTAGAGCAAATACTACTACTTAAATTGGGCTATTTGTGAGCCTGCACCTCAAGTTTCACTCATCCCTGGTCTGAAGTGCACTAAAAGCACATTATTACTGCTTAAGATGCAAACTACCATGCTGAAAAATACCACTTTTTAACTCCAGTGCAAGAAGTTAAAAATTAATGGTTAGTTGAAACTAAGGTG-ATCAGTAAACAGAAACTCCTCGTGACCATGTGCAGGTTATTCTCAATCTGTAATGAGGTTATACTTACCACTTAGATTAATTACTCGTTTTCTTCTATCTTAATTTATTTCACGCTTTAAGAAACCAACATGTCCACTAACCACTCTGTATGTGATAAAGAAACACAATAAAAGCAATTTCTCTCCTAACACCCCCACCCCCCCCAGAAAAAAACCATTCTCAGTAATGCATTTTTGAATCCAGCCTACCTTCTTCTAATGAGGTTTCAGCATGCCATAAATAACACTAATGAGACTTTGTCTTGCCCATGTAATACATTTCCTTAATATAGCTTTAGATTTTCTTATGTTGCATAGAAAACTAACAGTCGTGGAAAGAAATGTCCTCCGATAGCACATTAAAACCAAAA-TACAATTAAATATAAATGAATTCAGTAATTTAATTGCATTATAGTCATTTTTAAAAATTCAG-AGAAAAGTAATGGTGTCATTTTTTC-TATTGGTAAATAATAAAAGTGC-TGAGGGAATCAGATAATATTTAAATAAACATTATTGTGACAA ..::.:...::x.::.....----.....xx..:..x:.....x.......:..........-.:....::...:.....:.:.-....:x.::xx:x..:x.:......x.::x.:..:.......x...::..:......:....x.......:....:.xx...x.:..........x........x::..........................:.::::.:........................:...:............:::x..........:::..:....x..xx:...x..x......x...............x..::x.......-:.x:.....:.....:....::x:.:.x....:...::.....xxxxx::.:......:..:.:..:.::--.:..........:--..........x..............::..............x.......x..:.....x..:x..:..:...........................:xx..--------------.xx.:...x...x.....:.:......................x.......::....................:........................................:........:.......:.......:..-::........:............:.x::............x...:...:...........x....-:.....................................:x..x...::...x..........-.....x......:...........:-x..:..................-..x...:..x:x.:..................x..x..:... 20M4D38M1D21M1I254M1D70M2I13M2I101M14I142M1I65M1D62M1D25M1D22M1D42M 703/875 80.3% 895/94230402 0.0% 30/875 3.4% 6373074 NA +8416 chr4 + 190214555 24118822 24118821 24119100 279 AAATTAAGTGGAGGTCAACACAATGAAACATTTTCTAAGTCACTGCTGTTTATTAGGAAGTTCAGAATAATAGGCTCCAACCTGAAAAAAAAATGTCAATGCAATCTAAAAATAAC-AAAAGGTGCATAACAAATTTGTCCTCATTTTGTTCTTAATAGAAGGTGTTTCTAGTGCATCAGCCAGAATGACCTATCAAACGCATCACCTTGTACAGTCAATTTATTCCTTTATCAGGCAGTCATTGGAGAGGGATTTTGTTTTGCATTGCCTCAACATAAA chr4 - 94230402 17748636 17748635 17748904 76481499 76481498 76481767 269 AAATTAAATTGAAGTCATTCCAACATACTATTCTTTCAGTCCATTCTGTTTAGT--GACGTTAGAAATAAT-GGCTCCTACCTTAGAAAA---TGTCTACTTGGGGTAAAAATATCTGAGAGGAACATGAAATACTT--CTTTATCCTGCTCTTGCTAGA---TGTTTCTAGTGTAGCAGCAGCAGCGACCTACCAGGAGCAACACCTTCTACTGTCAAGGTATTTCTTTATCAGGTATTCACTTATGAAGGGTTTCACTGCATGCTGCCTTAATGCAAA .......:.x..:....x:x...::x.x:...:.:.x....xx.x.......x.--..x...x::......-......x....x.:....---....x.:x:::xx........x.-:.:...x:...:.x.x.:..--.:.:..::..:....:x....---...........:.x....x:x.::......:..::x...x......x...x.....xx....:..........:.x...:.x:x..:..:...:::.x:::::.....:..:::... 54M2D15M1D18M3D23M1I20M2D21M3D117M 181/268 67.5% 269/94230402 0.0% 12/268 4.5% 6370186 NA +4573 chr4 + 190214555 24121728 24121727 24121833 106 TTCATTATACTCCTGAGTTTAGGTTTGAAACATC-----ATATTTTCATTACAAATAAGCTTTGATGACACTGCCTATTGCAATGATTTCAACGCATGGTTAATTTTATCT chr4 - 94230402 17749142 17749141 17749252 76481151 76481150 76481261 111 TTCATCACATCCCTTAGTACAGCACTGAAATATCTTCTCATATTTTCATTACAAATAAGACTTGATTGCATTATCTATGGCACTGAACTTAACGTATTGACAACTGCATCT .....:.:.::...x...x:..xx:.....:...-----....................x:.....x:..:.::....x...x...x:.:....:..x.x:..:.x:.... 34M5I72M 76/106 71.7% 111/94230402 0.0% 5/106 4.7% 6372586 NA +3524 chr4 + 190214555 24122362 24122361 24122455 94 TATGCGTATGTGTGTGTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398781 33398780 33398873 60831530 60831529 60831622 93 TATACACACATGCGCACAGAC-CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:.::.::..:.:::.x:.-:..:.:x:...:.x.:x:x.....:.......:...:.:.......:.:.x.x.........x.....x... 21M1D72M 61/93 65.6% 93/94230402 0.0% 1/93 1.1% -9276419 -84953983 +3050 chr4 + 190214555 24122369 24122368 24122444 76 ATGTGTGTGTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAG chr4 - 94230402 39267148 39267147 39267221 54963182 54963181 54963255 74 ATGTGTGTATGGGCGCAC--GTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAAACTAAAAAAG ........:.:x...:.:--...xx...........:.:.:x........x.:...:x.....:.x.:x:.:.:.. 18M2D56M 52/74 70.3% 74/94230402 0.0% 2/74 2.7% -15144779 -79085623 +3390 chr4 + 190214555 24122395 24122394 24122481 87 GTGTGTGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAG---------AGAGAGAGAGAGAGAGATCTATATAAATTTTGCTTCA chr4 - 94230402 50558510 50558509 50558605 43671798 43671797 43671893 96 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAGATTTACAGAAAAATATAGAAGTTTTGCACCA ...::.....x.............:.:....:..:....x.:.....:.:---------.:x:...xxx.x...:.xx....x..:......x:.. 50M9I37M 62/87 71.3% 96/94230402 0.0% 9/87 10.3% -26436115 -67794287 +3854 chr4 + 190214555 24122396 24122395 24122473 78 TGTGTGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGATCTATATAAATT chr4 - 94230402 33398810 33398809 33398887 60831516 60831515 60831593 78 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaact ...:.x.:x:x.....:...::.:....:.:.......:.:.............x.....x...x..x...:x:..:. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% -9276414 -84953988 +3657 chr4 + 190214555 24122398 24122397 24122468 71 TGTGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGATCTATAT chr4 - 94230402 33398810 33398809 33398880 60831523 60831522 60831593 71 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat ...:.x.:x:x.....:.::.:.:....:.:.......:.x.............x.....x....x.:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -9276412 -84953990 +3380 chr4 + 190214555 24122400 24122399 24122469 70 TGTGTGTGTGTGTGTGCATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGATCTATATA chr4 - 94230402 33398810 33398809 33398879 60831524 60831523 60831593 70 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgta ...:.x.:x:x......:.:.:.:....:.:.......x.x.............x.....x.xx...:.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -9276410 -84953992 +6283 chr4 + 190214555 24124711 24124710 24124995 285 ACAATTTACTGCAAACTAAATTACTAATCAATATCTAGTAGTAGGCAGACTGTCCACTGTGGCTGTGAGA---GTCATATTCAATCTATGATGGGAGATGCTAGAAAAGGAGACTGCTCTGCTTAA-ATTTTATTCTTGTTTTGTATTCAGACATAAATAAGCTTGCTGATCATATCACTGTCTCAGATTTATGGAAAACACAAGAGAGCACAAGAATTTCAGAAAACCTCCCTGGATCTTGCAATTTCTCAGAGTAAATACTTCACACTCCCTCCTTGAATGTAAGAA chr4 - 94230402 17750911 17750910 17751162 76479241 76479240 76479492 252 ACATCTTACTGCCAAGTAAATCACTA-TCAATA-CTGACACTATGCCAGCCGTCCACTTTGATTGTAAAAAAGGCAAAGTTGGAAC----ACTGGACATCTGAAAGGAAAAGA-TGCACTGTTTTATGTTTTACTCCCGGTTCATATTCAGAAGTAAGTAAGCTTGCTGAGCATATCACC-----------------AAAAGAAAAGAACTGGGGAATTTATGAAAACCTTCTGACTTCCTGCAAT-------------TACTTTATGATCCTGCCCTGAAAGTAAAAA ...x:.......x..x.....:....-......-..:::.x..x..x::.:.......x..::...:.:.---.:x.x:..x:.x.----.:x...x..x:x.:.::.::...-...x...:..x.-:.....:..::.x..::........x:...:............x........:-----------------..x.x..:...:.xx::......xx........:.:x:xx..:......-------------.....:.::x...:x..:....x....:.. 26M1D6M1D36M3I13M4D23M1D12M1I53M17D49M13D30M 170/248 68.5% 252/94230402 0.0% 41/248 16.5% 6373800 NA +4097 chr4 + 190214555 24127029 24127028 24127190 162 CTTCCTTTCATACTGCAGGTGACCTCCCAAAGTCCTGGGTCACAGCTGACTAAATGAACTGGATAATTAAAAGAGGGGATGAGCCA--TGCCGT---GAGGTTTT-GTCTGCCTCATCAAGAACACCATGCCCTTTTTATCAACCTACTTGGTTTTTTGTTTTTATTT chr4 - 94230402 17757516 17757515 17757681 76472722 76472721 76472887 166 CTCCCTTGTATACCTGGTCTGGCCAGCTGGGTTCGTGGCTTGCAGCTGGCCAAATGATCTAGATAATTAAAGGAGAAAAAAAGCCCTTTGTTGTTCAGGGATTTCAGCCTGTATAATCAAGAACATTTTGTCC--TTGATCTATCTGTGCTCTTTTTTGGCTTTTTTT ..:....x:....:xx:xx..:..xx.::::x..x...x.::......:.:......x..:..........:...:::.x:....x--..::..---.:.:...:-.:...:x.x..........::x..:..--..x...x.:..::x:xx.......x:...x... 86M2I6M3I8M1I27M2D33M 103/160 64.4% 166/94230402 0.0% 8/160 5.0% 6369513 NA +59890 chr4 + 190214555 24132368 24132367 24134554 2187 TGTAAAGTTCATTTTGAAGGCTGCCTAGAGTCCCGGTGACTTTGCTGGGACAATGAATAGTG-TCTCCCTCTAAGTAGTTAAACAGTGCAGAACTCTCGAGTAATACAGCAGCTGCTAACAACACTGTCACCATCACATTGTTTAGTCAGCGATTGTACCTCAATGACTTTCTTCTCTTGATATGTGCTTAGGTTACCAAGAGAAATCTGAGAGCCCACTAATGCAAAATATATCTAATGCAAAATGTTTTTCCTCTACCCTCTGCTCTCCCAAAACTGACCTTTGCATTGGGGTCTTGAA-GATAAACCTTCCTGCGATTTAAAGATTGATTCAAAACCTG----------------GTGTAGGGGGTTTCCCAGGTATTCATGTATTAACATTTG-CTGCTCAG---ATTTTTTTTTTCA---GACAAACAACATCCTTTCAAAGGGTTCC-TCTGGCACCTTCTTCACTTGACCTACCCAATTTAGAACA---GTCCCTAGTG-----------CTGTCTTGGTGGTGGCATTGCTCTGTGATAGCTAATACACATGCATACATTACTGCTGACATTTAAAAACATTCCTAACAGTTTGTGTGGGTACATGGTAAACAGATGCTATGGGATTTTT-ACCCATTATCAGTCATCTCTGAAGACTGCAGTCAAGTGACAGGTT-TTTGAGACTTTTTGGTCTAAAAGCAAGAGATTTATTTTTAATAGAATATTGATATTATGGTACAAAATGGTATTTGGTGTTTATTTCTTTTCCCCTTCTAGCAAGGCAGTTCAGCTTGGTGGGTTTTGAGGCCCTAGCA-CCCTTTATTCTATCTGTTATTCTGGTGGTTTCCCCCCTGGGGGGTGGTGGTGGGGGGGAAGTTGCAGACTTTTATGAACTGTCTGATTAAAGTGCCTCCATCTGAATGCAGATTTAAAGTTCCAACACCTGAGAGCTCAAAACCAATGAATATTTATGCCAAAAACCAGCAGATGAATACACTCTAAATCTTCAAATGCAAGTCTAGTCATGGGTTTTATCTTATTTTAGGACTTACTTTTTATTAAAATGAACTCTTGCATATTTACACTACAGAAATAAACGTTATTTGCAAGCACAATACAGTAGAGTCCTTACAAATGCACTGCCTCTGGGAAAAGCAACTTGGCTCCTCAAGCAGATTTTGTTTCGTTATCACGTCTTCGTTGAAGAGAAGTTTCATTGCATATGATTGGCATAATTCGGGGCCCAGAAAATACAACCATTTGGGGAGATTATTCATT-TAGTGGCCAAGATAATTGTACGTCCCTCCCTAGATGGGGATTTTTGTTGATTTAACAATTTTCCTCCTTTCATTGGAAACTTCTTTCAGGACCGCTTTTCTA--------GAAGGTAGAGATTGGTATAGGCAAGCACAAGGGGACATTATTCAGCAACAGGTTTATTTGCCTTCTCTGTAGGGTGGCTTAACCCATTTTGGTTCTGTAGTTAATGTCCCAGTTAATATTTGCTAGGTGCTCCTTCTACTAGAATAAGGAGCAAACTTGAGGTTTACCCTTAAATCCTAAACTGTCCCTTCAGAATACAATCATAGCAAAAGAACACTGGCCCTCATAACAATTAGCTCTAAGAAGTGGTTGAGGTTACACAGTCAGGCC-----AAAGACAAGGGTAACCAGACCAGAGGCTC-CTAACCTAGCTCATT--CAACAACACAGGTGAAAGCAAATATTGTTACC-------GGCTAACATCA---CAATGAGCAAATGACTCCCAAACACA-TAAAAGGTGATTCTT---TCAAAGACAGAGAAAT---GTCCCATCTTAGACCATTCCTTCCGATA-----------CCTTTGCACCA-------TTTTGCTTTTCATTAAATTGCAATAAACCCCATATCAAAAGCCAAGTGGAGTTATCAGAATTAAGGGAAATACAA----ATTTTGATTGATCCCACTATGCATCTTGAGACTTCCCT---------GCCCTCACGTTACTGAGGACTTAGAATATGCAA----ATTTACCATCATGTTCCTAAACTTA-----TTCCTTCTTTTTCATAAA-GTAAGCTTAGAGATAAATGTTTACAAATCAACCCAGTCATCATTTCTTCATTTTAATGCTTAAACGCTTCATTTTGATTGCTGCCTTTTTGACATTTCACCAAGGAAATATGTTTGCGTGTTCGCAATGCCATTGAATCAGCAATTAGATCTCCATATTCCAGATGTCATGAGAGTTTTCAATGCATCTCCCAATAAA chr4 - 94230402 17759212 17759211 17761275 76469128 76469127 76471191 2064 TATGAATTGCAGCGTGAAAAGTGGCTTGTAGTACAATGACTTTGCCAGGACAACATACCCTGCTCCATATCTAAGCAGTTAAATAGCGCAGAATTGTCAAGTAATAGAGCAGCTGCTAACAATGCTGTCACACAAACACTGTTTAGTCAGCAACTGCACCTATATGACACCCTACACTTGATGAATGCTTAGGTTTCCAAATGAAATGTGATACCTTGCCAATGCAAAAGACAGCCTAAACCACAT----------CACCCCCCGCGCACATCCTGCTGACCTTAAATTCAGCACCTTTCACGATTAACCTTCTTGCAATTGAAAGATTTACCCTAATCCCACTTAGCCACTTTCAGAGCGTACAGGCTCTTTACGTTGGCACTGTCACTGCAGCTGACTGCACAATTTATTCTGGTTTTCATACGGCAAACAATATGGTTTGAAAAATACCCAGCTTGTATCCCCATCACTTGACCTCCCTAATTTAGAGCACAAGCCCCTAGTGTGGCAGCGACGCTGTCTTTGTTGAGCTGTTGCTCTGTGAGAGCTAATACA--TGCATACATTACTGCTGACATTTAAAAACATTCCTAACAGTTTGTGTGAGTACATGGTAAACAGATGCTATGGGATTTTTTCCCCATTATCAGTCATCTCTGAAGACTGCAGTAAAGTGACAGGTTGTTTGAGACTCTTCGGTCTAACAGTGAGAGATTTATTTTTAATAGAATATTGATATTATGGCACAAAATGCCATTTGGTGTTTACTTATTTTTTTTCTCCG--AGAGCTG--CAGTTTAGGGTTTTTTTAAGCTTTTGCAACCCTCTGTTATATCTACTACTCTATT--TTT-------------------TATGAAAAAAGTTAGAGACTTTTATGAACTCTCTGATTAAAGTACCTCCATCTGAATGCAGATTAAAAGTTCCAACACCTGAGAGCACTAAACCAATGAATATTTATATAGAAAAACAGCAGATGAATGCACTTTAAATCTTCAA-TGCAAGTCTAGTCATGGGGTTTATCTTATTTTAGGGCTTACTTTTTATTAAAATGAACTCTTGCATATTTACACTACAGAAATAAATGTTATTTGCAAGCACAATACAGTAAGGATCTTACAAATGGATGGCCGTGGTGAAAAGTAAATTTACTCCTCAAACAGA-TTTATTTCTTTATCAAGTCAT-ATTTAAGAGGGCTTGCACTTCGTGCTGCTTGCACAGCTTGGTG--CAGACA------------GGGG----CACGCACTGCAACTGCCCTGGT--TCCTATGTCCCTCC----------------------TGGACA-------------CCCCGAGAGGCTCCTGAGGCACAACACTGCTGCACGCCATGGGGGAAGTGATGGAATTCCTCTGACAAAAAGGATCGCTG--------------GGTCTGGCTGCTCAGATGGCTGGGCTGA---------GCTTTTTAGAGTATGTCACCAT---------ACAGGTG----GGCTGCTGAAATTATGAGTA------------------------------------------------CATGGC----------------------CAATTAGCTCCAGT--GTGGTGCAGG----ACGGCCAGGTCACCCAAAATCCCAGGCT--CCACACGGGCCGCACGCTGGCCACGGTCAGTGCCTGCAGCCCAAACCAACGCGGCCATCGCCCCCATCCCAAAGTCAGCACCAGCTGAATGGGTGTGCTGCTGCCAACAACAGTAAATGGCAACTCCTGCCTTGCACCCAGGATCACTGGGTCCTTCTGCGCGCCACTCCTGACAGTGGCAATGCCAACCCTTTGCACAAACCAAAGCTTTGCTCCTCCTTTGAC----------------TCAGAAG--AAAT---------AGATTTAAAGTAGTTGCAGCAGCACTGGGAATGAATTCCTGATGCAGCCCAAGTATTTCCTAGCCGGTACACCTTCGCTCTCCCCAGATCTCATGTTCTGTAAAAAGATTTGTTGCGCTGTCTCCAAAACTATGCTGTTCCATTTTGTTTTTAAATGTAACCTTAGAAATAACTGTTTACAAATCAGC----TCATTGTTTCTTTGTTTTGAAGCTTAAA-GCCTCACTTTGATTGCTGCCTTTTTGACATTTTGCATAGGAAATATGTTTGCATGTTCACAGTGCTATTGAAACAGCAATTAGATCACCATATTCCAGCTGTTACAAGGTTTTGTAATGCATTTTCCAATAAA .:.:..x.x..x:x....::x..x..x.x:x:x.::.........::......::x.:xx..-..:x:x......:.......:..:......:.x..:.......x...............::.......xxxx...:............:.:..:....xx.....x::..x.x......:x:..........x....:x.....x...x.x.:::.:.........x.:.x.:x.x:.x.x..----------:....:.:..x.x.x:xxx:........x:xx.::.x::...xx.-...x.......:...:...x.......x.::.x..x..::----------------.:...x:..x.:.::xx.x.:x:xx...xx:x:..x:..-....x..:---...:.xx......---.:.......:..xx...x...::xx:..-x..x.:.:.::.x...........x..:........:..---.:........-----------.......x..x.x.x::...........x..........--................................................:...............................-x...............................x............-.........:..:.......x..::...................................:........x:............:..x....:::::..::--.::..x.--...:..:.x.xx....x.:..::.x...-....:.:..x.....::..:...:x.--...-------------------.:x.::::.....:x...............x............:....................x.....................x.x..................::x:....x............:....:...........-..................x................:..................................................:........................::.x:..........x.:x...x:x.x......:..x..x:........:....-...:....x......x...x.-:..x.....::x..x..:.x.:.::x::.x...:.::.:..x.--....x.------------....----:.:x..:.-:.::x...xx.:.--.:x..:........----------------------.x:...-------------.x::.::.:x:..:.xx:.x..x:.x:.x..:--------.::..x..x...x.:xx.xxx.x::..x..:..:x.::.:--------------x:.:..x..x...x.xx..x...x:.:.---------.:.:.x...xxx.....x.x:.---------x:.....----xx..:..::...x.x...:.------------------------------------------------...:..----------------------..........:.:x--.....xx...----..:.:....:.-----...xx.x...x.--...x..x:.xx..x.-..::..xx.x...x.--.x:..:.x..:::x..x..::x:..:.::x..-------:.::.:..:..---x....:.::x::x:..x....xx...-....x..::.:..:.---.::x.xx...::xx.:---....:x::x::x:...:....xx.::.:-----------.........x.-------:......::..x..x:.:----------------...:...--..:.---------...x....:.x.:x.:..:----.:.xx..x...x::.x:x.....x.:::..xx..:...---------:..:..:.x:.x.:x..:x..:.x:x.x..:..----....:::::xx...::.:...x:..-----....x.:..x..:x....-....x......:....x.............:.----....::......::....:.x.......-..:...:.........................::.xx...............:.....:..:...:......x.............x...........x...:.::..:x...x:.......:.:........ 62M1I183M10D45M1I40M16I39M1I8M3I13M3I28M1I39M3I10M11I39M2D80M1I45M1I100M2D7M2D28M1I26M2D3M19D145M1D165M1D21M1D43M2D6M12D4M4D8M1I13M2D14M22D6M13D32M8I40M14D28M9D22M9D7M4D20M48D6M22D14M2D10M4D11M5I12M2D15M1I15M2I32M7I11M3I26M1I15M3I16M3I28M11I11M7I18M16D7M2D4M9D19M4I38M9I33M4I25M5I18M1I32M4D28M1D133M 1401/1946 72.0% 2064/94230402 0.0% 359/1946 18.4% 6373156 NA +13469 chr4 + 190214555 24149850 24149849 24150238 389 TTCATCTAAATCTAAATCTAATTTTTCATTGATTTACAGCAAACCTTACGGGAGA---------AGTTGAAATTCATTGATCTGGAATAGGATAAACAACTATCTTTCCA-AAACCCTTCAGGAAGGTGGAGTGCCCCCAATTTTTAGGACAAAAGAGTTTTTACAGATCATAGTAAATCAATAACTCGTAGACAGTATGACAGATACAGAATATCCTTACTTAAGAT-GAAAAACAAATTGTACATTGAGATCTTT-AATCAATAAAAAGCTAACAAATCAGTAGTGCAAACAAGGTGAGAGAATCTTATTTCATCCTCAGTCACGAACTGAAGAGACACACCGGGCAGTG----TTTTGTGGTTAAAAATTGCTCCTAGGCTGGTGTACTAGCGAACTATTGA chr4 - 94230402 17766751 17766750 17767149 76463254 76463253 76463652 399 TTTACCTGCGTCTAAATCCATTTCTTCAT-GATTTACAGAAAATCTGATAGTACATTAGCGTTCAGTTGTAATTCATTGACTCCTAGCAGAATGAATGAATATCTTTCAAGAAACCCCTTAGAAATGCTGATGACTACTGACTATTGGTACAAGCCAGTTTT-ACAGGTCATAGAAAATCAGTTACTCATAGAATGCGTGACAGACACAGAATATTCGTACTTTAAATGGAAAAAAAAATTGTGCATTATGATCCGTAAATCGATAAATATCCAACAAATCAGCAACACAAACGAGATGAGAGAACTTTATTTCTTCTTCAATCAGAGGT--AAGAAATATACCGGGCCAGGTAGTTTTAGCAGT--AAAACAGTTACCATGCTAATTTTCTACTCATCTAGTAA ..:.:..:x:........:.x..:.....-.........x...:..x.::.x.x.---------.....x..........:::xx.::..:..:..::.x........x.-......:.:..:..x.:x..xx:.:x.::.:.x..:.x....:xx......-....:......x......:.x....:....xx.::.......:.........:.x.....x.:..-......x.......:....:x....:x.-....:.....x.x.:..........:.:::.....:..:........::.......x..:...:...x::::--....:.:.:.......x:x.----...x.::..--....:x.:.x.:.x...::.x.x...x:x.x...x.:. 29M1D25M9I46M1I51M1D65M1I28M1I72M2D20M4I9M2D38M 269/383 70.2% 399/94230402 0.0% 22/383 5.7% 6383099 NA +9301 chr4 + 190214555 24156500 24156499 24156717 218 ATCAATCACTCGTGGAAAATGCTAGGTGTCCCATTATGGTATGATAAGTTCAGCTGCAGAGTATATGCATTTTTTTGCTCTCTGAATAAATGGCAGAAGTCAGTTCTCCATAAATTCAAAATGTATATGAGAACATGAAATCATATTTTAAGTGGATTTCACAATTGCTCCTCTTTATCATTCTAAATACCAAAGATTAAGCTTGCCTCTTGGCTGTT chr4 - 94230402 17770584 17770583 17770799 76459604 76459603 76459819 216 ATCCATCACTTCTGAAAACTGCCTAGCACATTATTAGAGCAGGAGAAGTTCAACTGCAGATCACATGCATTTTTTGGCTTT--GAACAAATGGCATGAGTCAATCCTCTATAAATTCAAAATGTGTATTAGAGCACAGACTCCTATTTTAAGTGGGTTTTGCACCTTGCCTCCTTTTTCCACACAATTGCTGGAGATTAGCCCTGCCACTTTGCTACT ...x......:x..:...x...:x:.:::x::....x:.:.x..x.......:.......x:.:...........x...:.--...:........x:.....:.:...:...............:...x...:..:::.x..x............:...::..x:.xx:.::....x..xx:x:..x.:.:::......:x.:....x...x...::. 81M2D135M 149/216 69.0% 216/94230402 0.0% 2/216 0.9% 6385916 NA +3057 chr4 + 190214555 24156722 24156721 24156765 44 TCTTTTCTCTCTCTCTTTTTTTTTTTTTTTTAACTTTTGTTTAA chr4 - 94230402 86355160 86355159 86355203 7875200 7875199 7875243 44 TCTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAAGTATTTTCTAA ....:...........:................x.x..x.:... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -62198438 -32031964 +21263 chr4 + 190214555 24163162 24163161 24163630 469 CAACAGCAATGCCATTTGTGTGTGTTTCCACTAAAT--TAT-GTGCCATACTAGATAAAAGATTTGTTGTGAAA-AACAGCCACTTCCAA------------AAGTAA--GAGAGTTTATCAATTCTAATCATTCTTATCCAAAATTAGTTGTCAAGTTTCAATGGCTGAAATGAATTTAACAACATAAATTTCGTACCACTGCTGAATGTCTAATGCAACCTCATAGAGCAGTCCTGAATACACAGCCCTGTCGGGGTTCACCAACTACTTTTAAAATATCAGCACTTTTGTGGTATAATAGAGCCTATTAACAACAGTTGGCTGACATTAGAGGTAGTCAAACTAAGCATCAATTTAAAAAAATATGCTGACCTTTCCGAAAATT----AAGAAGCAGTTGCCCCATACTCA-CCAAAGGGAAAT-----CGGAATAATTACTGTGGCATTATGAAACCCAGTTA-TTTGACTAATAG-CGATATTTTTTCACTGCC chr4 - 94230402 17772847 17772846 17773341 76457062 76457061 76457556 495 CAACATTAGATTTGTTTGAATGT-TTTTCATTAAATGCCATCGTGCCATACTAGATAAGAGATTCTATTTGAACTAGCAGCCACTTCCAATTTTTCCCCCCAAAATAAAAGAGGGTTTATCAATTCTAATCATTCTTATCCAGAATTAGTTGTCAAGTTTCAATAGCTGGCATGGATCTGACAACATAAATTCAGCACTAGTGTCAAATGACTAATACAACCTTGCAGAAGAGGCCTGAATGTATAGTCCTGCTGGGATTGACCAACTGCATTTAAAATATCAGCACTTTTATGTTATAATAGCTCCTATTAACAACAGTTGGCTGACATTAGATATATTCAGGCTAAGCATCAATT---AAAAAGTTGCTTATCTGTTTGAAAATCTGGAAAGTAGCTATGGGTTCTCACACAGTCAGAGAGTAATACAAATGAAATAATTGCTGTGGTGTCCTGGGACTGTATTACTTTGACTAATAGACACTGCTATTTTTCTGCC .....x:.:xx:::....x:...-...:..:.....--:..-................:.....:xx.x....x-.:.............------------..:...--...:............................:.....................:....:x...:..:.:............:x.:..:.x..:::....x.....:......:::...:x..x.......::.:..:....::...:..x.......:.x....................:..x........xx.............................x:..x...::.............---.....xx....x.:..x.::......:----...x...x:.x.x::.x:..x..-:..:..:.x...-----:.:.......:......::.:x..::..:xx:...-............-.:x.::.x...:x..... 23M1D12M2I3M1I32M1I15M12I6M2I247M3D27M4I23M1I12M5I35M1I12M1I18M 359/465 77.2% 495/94230402 0.0% 34/465 7.3% 6390315 NA +7452 chr4 + 190214555 24172630 24172629 24172842 213 AGTGAATGCCTGGGGTGTTT-TAGATGTAATTCCCTCCCTCCCTGGAAGGGCCTGG--------------------GTTTCGCCTTCACTGTCAGTCTCTTTTCTCTCAGGCAGACAGTTCATCC-GTTGAAATCAATAGGTAGGAAATCAATAAAATGCAAACACGGCACTTTACCCTTGCTGGTTTAGTCTCTCTCCCTTCAATCCTGAATACACCGCCGTGTTTCCTTTACA chr4 - 94230402 17777157 17777156 17777390 76453013 76453012 76453246 234 AGGAAAAACCCAGGGTGTTTGTTTATATAATTTTGCTCTTGTCATGCAGGGCCTGGCCTGCCTCTGTGATGCCCAAGTTCCTGTCTGCTTGTCAGTCTCGTTTCTGTTACGCAGACACTTCATCCCACTGGAATCAATAGGTAG-AAATCAATAAAATGCAAACGCTGCACTTTACTCTGCCTGCTTCAGACGATGCTCCTCCAGCCCTGGAAATGCCGCAGCTCTCCATTTACA ..x:..x:..::........-.xx..:.....::x::.:.x:.xx.x.........--------------------...:.xx::.xx:..........x.....x.:.x.......x.......-::..:.............-...................:.x.........:..xx...x..:..x.xx.x::...:..::....:.x.::....x.:x:.:.x...... 20M1I35M20I49M1I18M1D90M 150/212 70.8% 234/94230402 0.0% 23/212 10.8% 6395473 NA +10919 chr4 + 190214555 24174919 24174918 24175328 410 CCTCTTTATATATCCTGTGAAAATGCCCTAAGAATGCTGTTGCAAAGTGTTTATCTTC--------TCTGGTAATACTAAATACAAATGT---CTCCCAGGAATCTTGTTGCTCGGGGCC----TAGTGTATAACTTTCTAA-AAGTAACTACTGCCTCCACACAGTCCCCTACA-GAGGCCTCGCGATATATATCATTAGTTCATGAGCTTCATTGTTGGGTAAGAATGCCATTAGAAAACATATCATTTACCCAATAGACTAAAATGGACCCCAAGGAGCTATTCTAGTCTATCAGGTAATTATGGGGGAAACCTTGTATTATTTACTGGAGAAAATGGAATACCACCCTGGGAGGCATGATGGCCCATCCCTGTTATCAATGATAAAGAGATGATCCCATTTTGTGATAACAACCATTGAGCTT chr4 - 94230402 17778248 17778247 17778650 76451753 76451752 76452155 403 CCTCTTTAGACGTTCCTTGAAACTGCCAGGAGATTGGTGCTGCAAAGTATTTATTTTCCACTATGTTCTGAAAA----GGACATTAATGTTCTCTCCCTTGAATCCTGAAGCTCACGTCCGTCCTATTAAAAAACTTTATGAGAAGTAACTACTGTTTCCCTGCAGTCCCCCCCAAGAGCCTTCAGTATATATATTATTATTTCACAAGCTTCACTACCGAGTTGCATTGAAATTAGAAAATGCACCATTTACCCAACAGACTGGGTCAGATCCCAAGGATGTATTTTACTCTGTGAAGTAATTAGGAGAAGA-----------------GAGGCAAGTGCATTATTTCACCTAGA---ATGTTGGTCCACCCACAACAGCATTAACCAAAAGGTTAGTGCCCTCAGTGATAAAAGTTACTGAATTT ........x.::.:.:x.....x....xx:...x..x..:........:.....:...--------....:x..----::.:.:x.....---.....xx.....:..xx....:x.x..----..x.:x.x......x.:.-............::...x::........:x..-...x.:..:xx........:....x....::.......:.:::.:..x:x.x..xx.........:::.:...........:.....:::x::..:........xx....:..x...:.x.:.......x.:.:::.-----------------.::.x..:..x.x..::x.x.:x:..---...x...:...:..x::x:.x..x.:.:x..:..:.x.x:x.x:.:x.......x.:::.:...::.. 58M8I8M4D12M3I27M4I18M1I32M1I137M17D26M3D68M 256/386 66.3% 403/94230402 0.0% 41/386 10.6% 6396671 NA +39555 chr4 + 190214555 24192440 24192439 24193414 975 TGAACGGAAGACCCTGCCAACTGA-ACATTATTCCTTTTGGTTTTCTTTGGGCAAAGGATGGCTAAGCAA--AAAAGGAAAAGCAAGACAAAGAACAGTACTTTGTGAAATCTTCCCCAAAAGGACA--GCATTGTAAGT----------CTGCCGTGAATAAAGAGTGTAAATTATATTCAGCATGATATAAGTAATGACATATCAATTAACTGTGTCAACAAGGTCTAAAAATATGCAAATTACTGTACTTCAATTAGAAAAATCTACATCCTTAGAGAATATTGTAAATCAGGAAATTTGGGAGACATTAAGAGTAATCAGTGAGGGAAAGCATGTACTTTTTGCTGTATCCTATTTTTATACATACATAATGAAATAATTATAGCTACACTGTATTTATGCCTCTGCAAAAATATTAAAATCTTAAGATCTTTACAATGATAAGTTAAATCTGTATTATGTTTTCAGACAACATTAATTATAAGAAAAAGAAATCTATTATCATTCAATATAAGTAAGTTGAAACTAATTTGGACATGTAAATTAGAAATGCTGTTTTTTT-CAGCACCAGAACATTAGAAAAGAGAAAGCAAGAGGAGATATCTAGATCAATTACTGAGTCTATAAATGCAAATAGTTTAGCATA-TTTAAGTCG-TAATGCAAATTTAAGGATGTTTAGTAACTTTTCTCACAAATAT---CAAACTATTTGGTATTTTAATTTTTTGGATGCCTTCTGATTTTCTTTG---TTTAACATGCATTTATCTGCTTTTGATGGAGTTGCCTTTAC--CTGAG----CTGTCTTCTAGCTGCAACTCAACAACACATAGCAGGACGCAAGGCCGGGAATGTATAAGGTGAAGTCAGTTTTCAATGACTTGGATCTCTACCACAGTAACAT--GGAGTGGTACCTTTGCTTTGAAATTCAATTTGCATCAATTCTAGAGATGCCAGAAGAATGCAAGAAAAAGG--AACACATGACTCAAATCAACA chr4 - 94230402 17785374 17785373 17786325 76444078 76444077 76445029 952 TGAACAGGA-ACTATACCAATTACTACATCATCCATTTTTGCTTAGCCTTTATAAAGAAAGGGTGAGGAAGGAAAGGAAAAGATTAAACCAAACGCAAGAGTTTC--AAATTCTTTGCAAAGTGCCACTGCATCTCGAGTTAAGCCTGCTCTGCAGTGAATA-----TGTAAAATATATTCAGTGCCGTATAAGTAATGACATATCAATTAACTGTGTCA-CAAGGTCTAAAAATATGCAAATTACTGTACTTCAATTAGAAAAATCTACATCCTTGGAGAATATTGTAAATCAGGAAATTTGGGAGACATTAAGAGTAATCAGCGAAGGAAAGCATGCACTTTTCCCTGTATCCTATTTTTATACATACATAATGAAATAATTATAGCTACACTGTATTTATGCCTCTGCAAAAATATTAAAATCTTAAGATCTTTACAATGATAAATTTAATCCACATTACGTTTGCAGACAACATTAATTATATGAAAAAGAAATCTATTATCATTCAATATAACTAAGTTGAAACTAATTTGGACATGTAAATTAGACATACGACTTTTCCATAGTACCAGTATATT-------GGAAATCCAGGAGAGATATATAGATTAATTAAAGAGGTCGTAAATGTGGAAAATGCAAGTTAGTTTCAGTTGATTCTGTAA--CCAAAAATATATACTGA------TGAAAAATGTATACACACAATTTGAAA-----------AGGA--------GAAGCTCTTTATGTTTTAACA-GCA-------GCTCTCAAACGA-TTATTTTTTCTGCTAAGAATTCTGCATCACGCCCAAAACCTATCAGTA-----CAGGCTGTATACCTGCAAATGTGTATGGCAGTGTCAGATTTCAAAGACTAGGTCATTCACCACTGTAGCAGCAGTAGTGATATCTTTTGTTTGAAATTCAATTTGCATCTTTTTCAGAGATGCCATAAGAATGCATATAAGGAGCAGACATATGACTCAGATCTGCA .....:.:.-..:x.:....:.:x-....:..:.x....x.:..xx::.xx::....:.x..x.:..x..--...:.:...:::x.:..x..:x:..:x.x...x--....::.::x....:x.x..--....:x::...----------....x.......-----......x.........:::x:................................-.......................................................:...............................................:..:..........:......:x....................................................................................................:..x....:::....:....x..................x..............................x.................................x..:.x::....::-:..:.....x.:...-------:....x.x..::.......x.....:.....xx...x:::......:::.x.:.x:.:xx..-...x...:.-.xx..:..--::..::..:.x..x.:.------.x.x....:.---..x..x.....:x.-----------x...--------..xx:.....:---.......-...-------...:.::.xx..-..:::...x.--..:..----...:x.:x::x.::x...::.x..::.-----....x:.:.x:x.:.x:.....:..x..:::x.....x......x....x..x:x.::.....x...:..x--.x....:..:....xx....................xx..::..........x.........x:x..:::.--:...:........:...x:.. 9M1D14M1I45M2I33M2D20M2I11M10I12M5D53M1D344M1I15M7D62M1I9M1I8M2D17M6D10M3I14M11D4M8D11M3I7M1D3M7D12M1D10M2I5M4I27M5D71M2I71M2I21M 712/918 77.6% 952/94230402 0.0% 91/918 9.9% 6407066 NA +6617 chr4 + 190214555 24193252 24193251 24193414 163 CAGGACGCAAGGCCGGGAATGTATAAGGTGAAGTCAGTTTTCAATGACTTGGATCTCTACCACAGTAACAT--GGAGTGGTACCTTTGCTTTGAAATTCAATTTGCATCAATTCTAGAGATGCCAGAAGAATGCAAGAAAAAGG--AACACATGACTCAAATCAACA chr4 - 94230402 17788626 17788625 17788792 76441611 76441610 76441777 167 CAGGCTGTATACCTGCAAATGTGTATGGCAGTGTCAGATTTCAAAGACTAGGTCATTCACCACTGTAGCAGCAGTAGTGATATCTTTTGTTTGAAATTCAATTTGCATCTTTTTCAGAGATGCCATAAGAATGCATATAAGGAGCAGACATATGACTCAGATCTGCA ....x:.:.x:x.:.x:.....:..x..:::x.....x......x....x..x:x.::.....x...:..x--.x....:..:....xx....................xx..::..........x.........x:x..:::.--:...:........:...x:.. 71M2I71M2I21M 116/163 71.2% 167/94230402 0.0% 4/163 2.5% 6404626 NA +20486 chr4 + 190214555 24195527 24195526 24196581 1055 GAATTTGGGAAGGTAAATACTCGGACCAGATTTGCGTAATTAAATGAATTTCCAGAAAAATGAGAACATCAAACAGCAAGCAGGGTTTTAAATAGCGATTTTAAGACCATAAATTCAATACTTATTCCTTATGCAAACCATCATGATATTGTCAAGCTTT-TTTCTCTGTATTTTCAATTAATCCAT---ATTTCCCTCCT-------CATATTCTTCCATTTTTCCCATTCTTTTCATTTTT--------------ATGCCTCGCTATCCTTATTTTTGTGTTCTAGATACTCTAGGATTTATAGCAA-----AAGCACCAGG--TTCACATGTAGTTAAGG----------TTCTGCTAATGGATTAT-GCTAATAAAGAAATACACTCAAGCTTTAATCACCAAACT-GTAGCTTGT-------ACCTCAGAGCATCAA-GGGCCACAAGA-GAAGAAG-----------------------------TCC---CAATCAACAACTGATTTACAAGTTGGGAA-----GTCAGGAGGAAAGAGACCACACTAAATCTCTCTGCTTCATCCAAAAGAGGCCATGGGGTTTCTCTCTATTTCATCTCATCTGATTTCTCACTTTCAGTGCTCAGGAATAGAGAGAGGATTTACTTGCCATGAGTTGTGATTAACACAAGTTAGCTTTGTTGAATGCCACCACCCTCATCCTGACGGATGGTGTACTAGTGTAGGATGGATATCAGATTGGAATGTGGATAAATTCTAC---------------AATGCTAAC---TGAGTCATAAATCTGTGTAAAAA---------TAAAGGGAGA----GCTAGGGAGGAAAATCAGTCTTCCCCTT--ACCACTCCCAGAGAA---------------GGAGAGAAAAATGAAAACAGGAGAAA-----GAAATGCATGCTTTACACACAGCCCACCTTTTATTGGAGAGCCTTGCTCTGTATC---CAAAGGCTTGGCAATT-ATTTGGCTATTACTTATCTTTAAACATCAGCTAAAGAGATCTAGCATTTTGGAAAGGTAATTATACCGTAATGCAGATGGTAGTAATAACAATTACCCAAGATAAGCCCTTGCAATGATCTTTACAAAGCAAAGCAAAGCAAAAGTAGCACTGACTCATGACGGACCTCCAGTGGAGAAGGCTGCAATGCAGTA chr4 - 94230402 17787266 17787265 17788369 76442034 76442033 76443137 1104 GATTTTTAAAATGCATATA----GGCCAGTTTTACTTAAGCTAAGGAGATTTCTGATAAA------CAT------GCAAATAGGAATTTAAACAGCAATTTAAAAACCACGAATTCAATTCTCATTACTTATGCAAACTATCATGGTCTTGTCATGCTTTATTTCTCTGCCTTATCATTTTATCTATGGTATTTCCCCTCTGTCGCTGCGTTTTCTT---TTTTTCCTGTCATCTACATTTTCTGGATGTGTTCTTAATGTCCTCACCTCCATATTTTAACCTCTCAGGTAACACAGACTTTACTGCAGCAGGCAGGGAACAGGCATTCACATGTAACTGAAGACACTGTAATTCCTGGTTAAGAATTGCAGGGAACAGAGAACT----TCAAGAT---ACCATCAGACAAGTGGTTTATCATATGAACCTAGGGGCATTTATGGGCTACAAGAAGAAGCAGATAGGCAGACAGATAGATTTAAAATTGGATCTATACAATTTCAAACT--TTTAAAAGCTAGTAATTATTATTTTTAAGAAACAG------CTAAATTGC-------CACTTAAAACAG----TAAGACTCCTTT-TAGTTCAACCTGTGTGA---------------------------------GATTTATTTGCCAT-ATTTCTGTTTGCCATTA--TAGTTCAGGAAAACAGCAGAATATCCATCCTTCC------TGCACT---GTAGGACTGGTATCAGATAAGGATCAGAACAAATTCTAAGGAAAAAAAAAAACAAACCCTCACAAGTTAATCATAAATCTATGTAGAAAGAGGACAGGCAAGGGGAAAAAGTGCCAAGAAGAGAAAACCATAATCACTATCCACCATTCCTATGGAAAAATAATTTGGGGGGGGAGGGAGGGAGCAAAGCAGAATGAAACACAGAAGCGTAAGCTGTAAATACAGCACACATTTTATTGCCG-TCTATGTGCTGCTTCAGTCCAGGACTTTGCAATTTAGTTGCCTATTATTTGCCTTCACACATTAGCAAAAGAGATCTACCATTTTTGAAAGGTAATTATATTGTAATGCGGGTGGCAGTAA-AACAATTACACAAGATAAGCCCTTGCAATGATCTTTA-----CAAAGCAAACCAAAAGTAGTATTGAATCATAAAAGCCCCAACGTGGAGAAGGCTGCATTGCAGCA ..x...x::..x.:.x...----.:....x...:.x...x:x..x..:x..:.x..x...------...------....::...:x......:...:....x..:....::........x..:...x...........:......:.x......x.....-........:x..x...x..x...:..---.......::..-------.:.x.....---.......::.:x.:.x......:--------------...:.::xx:x...x......x::x.:::..:..x:x:..:x....:x...:-----.:.x.x....--..........::.:.:.----------.:...x.x.x.:...::-.xx..:.:....x.----.....x.---.:..:..:..x-..:.:..:.-------....x:.:....:x.-....:......-....x..-----------------------------..:---....:xxx....--....x...:.:.x..-----:.:xxx.:....x..------......:x.-------..:::....x..----.::.::.:..:.-..x....x.:::.x...---------------------------------......:.......-.x..x..x..:x..:x.--...:.:x.xx:..::x..xx.:x::......xx.------..:...---......:x.:........x:.:..xx.:.:........x---------------..:x..x..---.x.:..........:....:...---------:..:....:.----..:.:.:..::...x.x:.xx..x.:x.--....:...:.x:...---------------....:..:::.xx...:...:.x:..-----...::.:.x...x..x.:.....x...x........xx.-x.:x..:x...:x..---.x.:.:...x......-.x...x......:..::...:.x....:...x...........x......x..............::.......:.:...:.....-.........x...........................-----.........x.........:.:...x....:.x:.x..:xxx...............x.....:. 19M4D37M6D3M6D85M1I26M3I11M7I9M3D23M14I52M5I10M2I17M10I17M1I14M4D7M3D11M1I9M7I15M1I11M1I7M29I3M3I12M2D15M5I15M6D9M7D12M4D12M1D17M33D14M1D17M2D34M6D6M3D39M15I9M3I23M9I10M4I28M2I15M15I26M5I39M1D15M3I16M1I86M1D37M5D65M 683/957 71.4% 1104/94230402 0.0% 245/957 25.6% 6408261 NA +50555 chr4 + 190214555 24195527 24195526 24197425 1899 GAATTTGGGAAGGTAAATACTCGGACCAGATTTGCGTAA-TTAAATGAATTTCCAGAAAAATGAGAACATCAAACAGCAAGCAGGGTTTTAAATAGCGATTTTAAGACCATAAATTCAATACTTATTCCTTATGCAAACCATCATGATATTGTCAAGCTTT-TTTCTCTGTATTTTCAATTAATCCAT---ATTTCCCTCCTCATATT----CTTCCATTTTTCCCATTCTTTTCATTTTT--------------ATGCCTCGCTATCCTTATTTTTGTGTTCTAGATACTCTAGGATTTATAGCAA-----AAGCACCAGG--TTCACATGTAGTT-AAGGTTCTG------CTAATGGATTATGCTAATAAAGAAATACACTCAAGCTTTAATCACCAAACT-GTAGCTTGT-------ACCTCAGAGCATCAA-GGGCCACAAGA-GAAGAAG-----------------------------TCC---CAATCAACAACTGATTTACAAGTTGGGAA-----GTCAGGAGGAAAGAGACCACACTAAATCTCTCTGCTTCATCCAAAAGAGGCCATGGGGTTTCTCTCTATTTCATCTCATCTGATTTCTCACTTTCAGTGCTCAGGAATAGAGAGAGGATTTACTTGCCATGAGTTGTGATTAACACAAGTTAGCTTTGTTGAATGCCACCACCCTCATCCTGACGGATGGTGTACTAGTGTAGGATGGATATCAGATTGGAATGTGGATAAATTCTAC---------------AATGCTAAC---TGAGTCATAAATCTGTGTAAAAA---------TAAAGGGAGA----GCTAGGGAGGAAAATCAGTCTTCCCCTT--ACCACTCCCAGAGAA----------------GGAGAGAAAAATGAAAACAGGAGAA--------AGAAATGCATGCTTTACACACAGCCCACCTTTTATTGGAGAGCCTTGCTCTGTATC---CAAAGGCTTGGCAATT-ATTTGGCTATTACTTATCTTTAAACATCAGCTAAAGAGATCTAGCATTTTGGAAAGGTAATTATACCGTAATGCAGATGGTAGTAATAACAATTACCCAAGATAAGCCCTTGCAATGATCTTTACAAAGCAAAGCAAAGCAAAAGTAGCACTGACTCATGACGGACCTCCAGTGGAGAAGGCTGCAATGCAGTA-------------GCCAGGCTGTCCCTGGAACAGTGACAGGCAGGTGCTATCCCTCTCATCCTCAGAGACAAGGCCAGGTGGAGGTTAAGCATTTCCTAAGTTTAAATAATTCTTGATGTAGGCACAATTCCTGACAGTCTTCATTTGATGGGAATCCTAGTCCATCTCAAATGCTAAACAAAAA--------GGTTTCTTCCTTTGCCTTGTAAATACCAACTTTGGC-CTCTATTCCTATATCTGAAA-CTGCCTGCCCCTTGAATTTATTTCTGTGAGGAAGGATTTATCCTACAACATGATAGTTGTTGAAACAGGGGGATC-TAATTGCTTAGAAATCATTAATTGCTATAAATAGATGACTTCTGGGAGTCAATGAACTATAAGCAGAAGAGACAGTGTGTTTGAATGTCATGCTTGAGCACTGGATATTTTTATGACTTGTCAGTGGTTCCATAAAAAACTTACACGGTGAAAGGTGCCTAGTCAACCTGTACTGATGGAAATTGCCAGTTAGAAATAGATTGTTCTTGTTTTAAACCTTGACCACCCTTCTAACAAATCAGGATGTGCATTTATGATGCATTACTAAGGAAAGTTAGTATTAGCCACCCAAGAAGGGGGGATCAAGGAGGACAGTGAGGAACCACTATCTATCTGATCTTTGCTATTTTCCAGGGCATGAAATAACAACCTGCCATCTACCTTTTGCAGGTCATTTTTATCACATTGTGGGCCAAAATGAAATTTGACCTCCATTTTCCAGCTATGCCAGTGATGATAAATTTAATACACACAGAGCAAATGATTGGAAGGCCCACA----GAAAGTCAGATTAGAGTGGGATTATTCATTCCTGAATTTCCAC chr4 - 94230402 17789733 17789732 17791676 76438727 76438726 76440670 1944 GATTTTTAAAATGCATATA----GGCCAGTTTTACTTAAGCTAAAAAGATTTCTGATAAA-------CAT------GCAAATAGGAATTTAAACAGCAATTTAAAAACCACGAATTCAATTCTCATTACTTATGCAAACTATCATGGTCTTGTCATGCTTTATTTCTCTGCCTTATCATTTTATCTATGGTATTTCCCCTCTGTCACTGCGTTTTCTTTTTTTCCTGTCATCTACATTTTCTGGATGTGTTCTTAATGTCCTCACCTCCATATTTTAACCTCTCAGGTAACACAGACTTTACTGCAGCAGGCAGGGAACAGGCATTCACATGTAACTGAAGACACTGTAATTCCTGGTTCATAATTGCAGGGAACAGAGAACTTCAAGAT---ACCATCAGACAAGTGGTTTATCATATGAACCTAGGGGCATTTATGGGCTACAAGAAGAAGCAGATAGGCAGACAGATAGATTTAAAATTGGATCTATACAATTTCAAACT--TTTAAAAGCTAGTAATTATTATTTTTAAGAAACAG------CTAAATTGC-------CATTTAAAACAG----TAAGACTCCTTT-TAGTTCAACCTGTGTGA---------------------------------GATTTATTTGCCAT-ATTTCTGTTTGCCATTA--TAGTTCAGGAAAACAGCAGAATATCCATCCTTCC------TGCACT---GTAGGACTGGTATCAGATAAGGATCAGAACAAATTCTAAGGAAAAAAAAAACCAAACCCTCACAAGTTAATCATAAATCTATGTAGAAAGAGGACAGGCAAGGGGAAAAAGTGCCAAGAAGAGAAAACCATAATCACTATCCACCATTCCTATGGAAAAATAATGGGGGGGGGGGGGGGAGGAGGGAGCAAAGCAGAATGAAACACAGAAGCGTAAGCTGTAAATACAGCACACATTTTATTGCCG-TCTATGTGCTGCTTCAGTCCAGGACTTTGCAATTTAGTTGCCTATTATTTGCCTTCACACATTAGCAAAAGAGATCTACCATTTTTGAAAGGTAATTATATTGTAATGCGGGTGGCAGTAA-AACAATTACACAAGATAAGCCCTTGCAATGATCTTTACAAAGCAAACCAAA-----AGTAGTATTGAATCATAAAAGCCCCAACGTGGAGAAGGCTGCATTGCAGCACTATCGCTCTGCTACCAG--TTTCCCTGCAAAAGTGGCAGA---GCAATATTGCAAACAGTGT-AGAAAGCCGACACAGTGAAGGTTAAGCACTCCGTAAGTTTAAAGGATTCTTAATCCCAGACTAATCCTTTATCGTCTCTATTTGGTGTAGATTCCAAAATACTCCAAGTGCTAAAGAAACATTTGTTTGGGCTTTTTTCTC--CCATACAGAGTTTAACTTTTACACCCTACTGCTATCCGTAAGCTCTGTTGGTGCGCTGCCTTTTT--------GACAGGATTTTTCCTGCCTTGTGAAAGTTGTCAAGACATGGTGAACACAACTGCTGAGCAAACACTAATTACTATTAATAGATAGCTCTGGAGATTAAGCGAACTA-AAGCAAG-----TAGTTTGTTTGAGTGCCACATCGAGGCACTTGGTATTTTTATGACTTGTTAGTGATTCAGTGGAGATTTTGCACGGCAAAAGGTGGCTAGTCAACCCATGCTGATTGAGATTGCCAGTTTGAAATAGATTGTTCTTGTTTTAAACCTTGACCAGCCTTCCAGCAAATCAGGACACTCACTGGTGATACATTACAGATAGGAGCTAGCATGAGACATGCAGGAA---------AAAGAGGACACGAAGGAAATA----ATATCTGATCTTTGCTATTTTCCAGTGCATAAAGTAACAGCCTGTCATCTACCTTTTGCAGGTCATTTTTATCAAGTTGCAGGCCAAAATGAAATTTGACCTCCATTTTCCAGCTAGTCTGGAGATGATAAATTTAAAGTAGACGGTGTAAATGAATGGTATG-CAACAAGAGGAAAGTCAAATTGGTGCAGAATTATTTGTGGTCAAGTTTTTGC ..x...x::..x.:.x...----.:....x...:.x...-:....x::.....:::x...-------...------....::...:x......:...:....x..:....::........x..:...x...........:......:.x......x.....-........:x..x...x..x...:..---.......::..xx:.:.----:...:x.......::.:x.:.x......:--------------...:.::xx:x...x......x::x.:::..:..x:x:..:x....:x...:-----.:.x.x....--..........::.-...::x...------..::.xx..x..xx:.:x:..x.:.x.xx:.....x.---.:..:..:..x-..:.:..:.-------....x:.:....:x.-....:......-....x..-----------------------------..:---....:xxx....--....x...:.:.x..-----:.:xxx.:....x..------......:x.-------...::....x..----.::.::.:..:.-..x....x.:::.x...---------------------------------......:.......-.x..x..x..:x..:x.--...:.:x.xx:..::x..xx.:x::......xx.------..:...---......:x.:........x:.:..xx.:.:........x---------------..:x..x..---.x.:..........:....:...---------:..:....:.----..:.:.:..::...x.x:.xx..x.:x.--....:...:.x:...----------------..:.:..::.:x..:x.x..x....--------....::.:.x...x..x.:.....x...x........xx.-x.:x..:x...:x..---.x.:.:...x......-.x...x......:..::...:.x....:...x...........x......x..............::.......:.:...:.....-.........x....................................x....-----.....:.:...x....:.x:.x..:xxx...............x.....:.-------------:....--.x......x..x....:...:---.::x...:x.xxx..x:x.-...:.xxx.:.xx:...:..........:.:.x..........x:......:..x:x:.xx:...:.:.x.:x....::.....:..x::..:.:.:xx:.:::...:.......x...x.--------..:..:..:..:--..x.::.:.xx::......x:.-.:...:.x....x:x.:.:x-...::x.:x.x:..xx...x.--------.:x.......x....:.xx::...x......::.:...x..x..x.-:..:....x..x..x..:.....:....x.......::..::x.:..x.x.::......-.....::-----:...x.......:..:..::::x::.....x.:................:....:...x:.::.:.x:..:.....::.......x..........::.:.....x..:..........x.................................x.....:.:..........:::x..:.x:....:......x:.x:::..:...:..x..x..:x..:...---------..:.......xx:.....x:.----x........................x....:..:.....:....:.............................x:...::...................................xx.::.x..............x::.x..:.x.:......x...x.x.-.x...----........:...:.x.::.:......::.xx:::.:...:::. 19M4D16M1I20M7D3M6D85M1I26M3I17M4I29M14I52M5I10M2I13M1I9M6I37M3D11M1I9M7I15M1I11M1I7M29I3M3I12M2D15M5I15M6D9M7D12M4D12M1D17M33D14M1D17M2D34M6D6M3D39M15I9M3I23M9I10M4I28M2I15M16I25M8I40M1D15M3I16M1I86M1D51M5D51M13I5M2D21M3D19M1D121M8I12M2D22M1I20M1I21M8D46M1I59M1D7M5D223M9D21M4D163M1D5M4I43M 1253/1771 70.8% 1944/94230402 0.0% 301/1771 17.0% 6405794 NA +37969 chr4 + 190214555 24213476 24213475 24214367 892 CTTTAACTCTCACACCCCATTGTGTGTTAACACTTATGTAACTCCAGCCTACTTTGGAAGGACAACTCC-TGATGTATAGCTGTCCAGACAGAAACGCTATGACATTGCGGCCTTTTTCCTG-GAGCTGGAAGCTGGAAAAAAGTCCCTTCTTATCAAGCAACTTA-TAAA--ATTGATGCTACCTAGAAAAGAGTACATATGTGTGCATACACACGTACATGCATATGTCCAGGCATGTGTGTGTGCATGTGTTTGTGTGTGTGTGTGTAACACAGAAGGAGAGAGAAAAAGGAAAAGATTTCTCTGCCTCCAAATATTCTTAATTGATTATCTAACATGGGATGTTAGCTCAGGTAATTTAGGAAATTGAAATTATATGTTTGTACAGAGATAATCTATGCTTAAAAATATCTGG---TGTGGTAGGAGGAACACTGATGAACAGTTTAAAAACTTGCTTCATGCAGGCTTAATATGGGGCTAATTCAGAAATACAGAGTTGGAGAGTTATGAGACTCAACATAAAGCGAAGCAGTTCACTGAGCGCTGTAGCGATCAAGAAAACACACATAAAAATTCCGATCAGAATGGAATGTGAGGCAAAAGCACAATTTCCTCCCAATCTGGAATATCAGCAGGATTTGCGCTTGTTGTTTGTGGTTTTCTGGGGTGGATGGTACATTACAGTGGAGCATCAGCACTAATGCTACATGGCAGCTCCTCAGAATACCATCTGCTTCCCTGAGAACTGTTAATATAGTTGTAATTATCTACTTCTAAGCACTTTATTGGGAATATCATTTGCAAATTAATCAACTACAGACTGGTAAAACAAATGACATGCTTCCCTGGAAACAACAGCAGTATTGCACATTCTTTTCCTAAGGATTAAGGGAAG chr4 - 94230402 17804824 17804823 17805653 76424750 76424749 76425579 830 CTCCAACCTCCA-GCCCTGGTGTGTGTTATTGCTTACATAACTCCAGCCTGCTT--AAAGCACAGCCCAGCGATGGGGAGATGCACAGGCAGAGCTCCACTGACATTATGGCCTTTTTCTTGCTTGCTGGAAGCATAAAAAGGACTGCATGTTAGCAGACAGCACAATGAAGTATGGATGTTAACTAAACAAGCAGAGAATGGGgtgt--------------------------gtgtgtgtgtgtgtgtgtgtttgtgAGAAAGTGTGTGAAATGGAG---------------------CTGCTGTGCTTCAGAGCCTTCTCAACTTATTACCTCATACCGAATTTCTGTTTGAATAATTTAGTAAATTAAAAGT-----------------TCCTCCGTGCTCCAAAGGATCTTGGAACATGGTGGAGAAAACACTCACATACAGCCTAAAAACTCAGCTTTCGTAGGTTTAACAGTGAGAAGATACA-AAATCCAGGCATGGAGAGTTATGTGGCTGATCATAAAAAGGATCAGCTCACTGAGCACTGTAGCTATCTAGAAAACACACATAAAAATTCAGATAAGAACTGAATGTGAAGCAATAGCACAATTTACTTACAATCTGGAATATCAGCAGGATTTTAGTTTGTTGTTTGTGGGTTGCTGGGGTATATGGTACATTACAGTAGAGCATCAGCACTAATTCTACATGGCAGCTCCTCAGAATACCATCTGCTTCCCCGGTAACTGTTAATATAGTTGTAATTATCTACTTCTAAGCACTTTATTGGGAATATCATTTGCAAATTAATCAACTACAGACCGGTAAAACAAATGACATGCTTGTCTGAAAACAACAGCATTATTTCAAATTATTTTCCTAAGGGTT--GGGAAG ..::...:::..-:...::x.........x::....::............:...--:...x...:.:.x-:....x:x..x..:x...:....:x:x.xx.......::..........:..-xx.........xx:....:::::x.x.x...x..::..:.x:.-.:..--..x....:..x...:.x...x:x.x.xxx.x...:--------------------------.::..........::..........x.x:x......:.x.::..:---------------------:.x..x...:..x:.::x....:..:.x....:..x.:.:x.:..x.:x.:.::::........x.....:...x.-----------------.xx..::....:x...:x....x.---::....:.::::......x.::x....::........::x:.:x:.:...:....:.xx.:.xx:..x..-....x...:xx............x.:..x.x......:x.:.x...:.........:.......x...x.....................x...x....:x........:....x..........x..:x........................xx.:.............x..x.......:x...............:................x....................................:.:x..............................................................................:.....................x:...:...........x....x..x...x...........:..--...... 12M1D41M2D13M1I52M1I43M1I4M2I35M26D45M21D76M17D24M3I70M1D401M2D6M 624/822 75.9% 830/94230402 0.0% 78/822 9.5% 6408652 NA +38211 chr4 + 190214555 24213476 24213475 24214367 892 CTTTAACTCTCACACCCCATTGTGTGTTAACACTTATGTAACTCCAGCCTACTTTGGAAGGACAACTCC-TGATGTATAGCTGTCCAGACAGAAACGCTATGACATTGCGGCCTTTTTCCTG-GAGCTGGAAGCTGGAAAAAAGTCCCTTCTTATCAAGCAACTTA-TAAA--ATTGATGCTACCTAGAAAAGAGTACATATGTGTGCATACACACGTACATGCATATGTCCAGGCATG---TGTGTGTGCATGTGTTTGTGTGTGTGTGTGTAACACAGAAGGAGAGAGAAAAAGGAAAAGATTTCTCTGCCTCCAAATATTCTTAATTGATTATCTAACATGGGATGTTAGCTCAGGTAATTTAGGAAATTGAAATTATATGTTTGTACAGAGATAATCTATGCTTAAAAATATCTGG---TGTGGTAGGAGGAACACTGATGAACAGTTTAAAAACTTGCTTCATGCAGGCTTAATATGGGGCTAATTCAGAAATACAGAGTTGGAGAGTTATGAGACTCAACATAAAGCGAAGCAGTTCACTGAGCGCTGTAGCGATCAAGAAAACACACATAAAAATTCCGATCAGAATGGAATGTGAGGCAAAAGCACAATTTCCTCCCAATCTGGAATATCAGCAGGATTTGCGCTTGTTGTTTGTGGTTTTCTGGGGTGGATGGTACATTACAGTGGAGCATCAGCACTAATGCTACATGGCAGCTCCTCAGAATACCATCTGCTTCCCTGAGAACTGTTAATATAGTTGTAATTATCTACTTCTAAGCACTTTATTGGGAATATCATTTGCAAATTAATCAACTACAGACTGGTAAAACAAATGACATGCTTCCCTGGAAACAACAGCAGTATTGCACATTCTTTTCCTAAGGATTAAGGGAAG chr4 - 94230402 17801623 17801622 17802454 76427949 76427948 76428780 832 CTCCAACCTCCA-GCCCTGGTGTGTGTTATTGCTTACATAACTCCAGCCTGCTT--AAAGCACAGCCCAGCGATGGGGAGATGCACAGGCAGAGCTCCACTGACATTATGGCCTTTTTCTTGCTTGCTGGAAGCATAAAAAGGACTGCATGTTAGCAGACAGCACAATGAAGTATGGATGTTAACTAAACAAG-------------------------------------CAGGGAATGGGgtgtgtgtgtgtgtgtgtgtgtgtgtttgtg------AGAAAGTGTGTGAAATGGAG-----CTGCTGTGCTTCAGAGCCTTCTCAACTTATTACCTCATACGGAATTTCTGTTTGAATAATTTAGTAAATTAAAAGT-----------------TCCTCCGTGCTCCAAAGGATCTTGGAACATGGTGGAGAAAACACTCACATACAGCCTAAAAACTCAGCTTTCATAGGTTTAACAGTGAGAAGATACA-AAATCCAGGCATGGAGAGTTATGTGGCTGATCATAAAAAGGATCAGCTCACTGAGCACTGTAGCTATCTAGAAAACACACATAAAAATTCAGATAAGAACTGAATGTGAAGCAATAGCACAATTTACTTACAATCTGGAATATCAGCAGGATTTTAGTTTGTTGTTTGTGGGTTGCTGGGGTATATGGTACATTACAGTAGAGCATCAGCACTAATTCTACATGGCAGCTCCTCAGAATACCATCTGCTTCCCCGGTAACTGTTAATATAGTTGTAATTATCTACTTCTAAGCACTTTATTGGGAATATCATTTGCAAATTAATCAACTACAGACCGGTAAAACAAATGACATGCTTGTCTGAAAACAACAGCATTATTTCAAATTATTTTCCTAAGGGTT--GGGAAG ..::...:::..-:...::x.........x::....::............:...--:...x...:.:.x-:....x:x..x..:x...:....:x:x.xx.......::..........:..-xx.........xx:....:::::x.x.x...x..::..:.x:.-.:..--..x....:..x...:.x...-------------------------------------.x:..x...---........::.....x.........x....------....:.x.x.x....x:.::-----:.x..x...:..x:.::x....:..:.x....:..x.:.:..:..x.:x.:.::::........x.....:...x.-----------------.xx..::....:x...:x....x.---::....:.::::......x.::x....::........::x:.:x:::...:....:.xx.:.xx:..x..-....x...:xx............x.:..x.x......:x.:.x...:.........:.......x...x.....................x...x....:x........:....x..........x..:x........................xx.:.............x..x.......:x...............:................x....................................:.:x..............................................................................:.....................x:...:...........x....x..x...x...........:..--...... 12M1D41M2D13M1I52M1I43M1I4M2I20M37D9M3I30M6D20M5D76M17D24M3I70M1D401M2D6M 630/821 76.7% 832/94230402 0.0% 82/821 10.0% 6411853 NA +11618 chr4 + 190214555 24230032 24230031 24230261 230 CAGCTC-CTCATTCCACCCTGCTCCATTGTGGTTCTAACCCCGTTTTCAAATGAAGTGCAATTTACATCTCTTTAACTAGAC----TGGGGTTATTACCATTGCAATCCTATTGATTGCAGCGCTGCTCTTAGCAACTC-GCTCCAATTTGATCATCCTTAGTCATTCTTGCATAACTACATGTGTATAAACAAGCCCTGGTATTT-GGCTAGCACATGTTTTGGGATGAGAAGGAT chr4 - 94230402 17809167 17809166 17809400 76421003 76421002 76421236 234 CAGCTTACTCATTTC--CTTGCTCCACTGTGGTTCTAACCTT-CTTTGAGATTAAGAGCAATTTACATCTCTTTAACTAGACATATTGGTGTTATTACCATTGCAGTCCTATTGATTGCAATGCTGCACTTAGCATCGCTGTTCCAATTTTATCATCCTTAGTCATTCTTGCATGACTGTATATTTATGTACGAGTTCTATTATTTAAATTAGTATATATCATTAGAAAGGAAGCAT .....:-......:.--.:.......:.............::-:...x.:..x...x.........................----...x...............:..............::.....x.......x.x.-.:........x.......................:...::..:.x...:x..:..::..:x.....-:::...:.:..:.:x.x:..x::....x.. 6M1I8M2D25M1D39M4I53M1I66M1I30M 181/227 79.7% 234/94230402 0.0% 10/227 4.4% 6420865 NA +18525 chr4 + 190214555 24233851 24233850 24235784 1934 AACAGAATTTAAATGGTCCCAGCCTAAGAATTTATAAAAGACTAAGT---CCTGACCTG----TGACAGAGATGAGAACTTTATTGGGCACGTAATTCAGAAAGGCAGGAAA-AGCTGATACACAGAACACAATGAATGTCAGGTTCAGGATTTAAATCTCAGTCTGACAGGGTCGGGAAAACCAATACAATAACGCCAGGGAGGAGAGA---TGTGCTGTGCAAATCCAGTGCGGTTTAGAACTTTGACTGCATAATTAGCCCGTGTTGTAATTAAGAATCTAGAGGGCCTACTGAAATGAAAGCACAATGGGCAGATTTGGATTCTGCTG--------CATGGA----------ACCAGCATACTTAACACAGTAAGAGTTTTCC---------------------CTGATTTTAGCTGGACACT------TTGGTAACTGACAGCCAGCGAGGCTTATAAAGAT-CTTCACACTACCTGTTTATAACAG----ACGTGACTGACAGAAGG---------------GAAATATTTTAAAAGTCCTTAGAGGGTGGCTGCATCTTTGGGTTTTCTATTTAGCTTCAGGAAAAAATACTTTTTCCAGTTATAGTTTCAC--TATCTGATCACAGAAAACTGAGTTCATTACAGGCATGAGGTCAATG-CTGTGTTGATCTCTAAGCCAATGATACACTGGCATTACAGGCTTGTTTTATTTATAGAGAACCATGATATCAAATTAG-ATGGGAAGGAAGACAGGGAAGAATTTAGCTCCAATTAGAATAAGTGTCTCT-----------------GGAAGGCATCTACTACCA-GTTTTCTAAAAATATAAGACAATGTCATGGATTCTATCTTTGTCTTTTAAAAAATCAGAGGAGAAAAGTAAGACGCTTACACACTACTGTGGTTATGTGCTAATTCAAAGGATCCACC-------------TTTACATAGAAGTAAAGTAGCCTGGGAAAGTAATGTATCCTGTTCATTTCCACTGCTCTTTCACGTAATCCAATAAACAGACCCCAGTGATCACTGGCTCAGCTCGTCATACT------AATTGGGCAAAATGAAACA---AAGTAAGATATGCTTTTCTTTTCTGTTCTGTTCTTTCTTTTTAGGATAGTCCTCTA-TTACAAGTATTTGCAACATGAAAACAAAACATCACACTCTAGAGGAATAATGGAGACACGTTAG--CCTCTGCAAGAACTCCACACCACAAATTTTTGGCTCTTGGC--------ACTTCT-----GAAATACTCATTTTGGGAATATTGTTTAAGGCAAGGTAAGAGGACACCAGTAATCTTATTTTAGTAATGATGCATCAAGAAAAAACTCCACTGGC------CACTTAACAACCACCAAGGTACCTAGAATCTAAAGAAAAAATGTCAGAGAAGCATCCACTTACGGATTCAGAATCTTAAATCCTAGGGGGG---TGGTGACTTTAAGAAACTGACATTTATAAGAATCA--AGAAAGGAAGAC-CTCAGTAAAAAACGTGGTGAGCAGAAGCTCTTGGGCCCTTAATATAGTTTATCTTTCACATAAAGGTATCTTGAAAACCTTTACACAAGTCCTTTATGAGGGAA-TAATTTCTGAGCTGGGGCAGACATGGTCTTTCAAATCCATTCTCAGTTTAGAAAGCATTTGTAAGGAGGATTTTTCCCAGCCACCACATGAGAATTGTCTGATGCCCTTGGAAATCTCTGTAATTAACAATAAGCCTCTTTCACAATTGAAAGTGGACCCTCATACCCTAAAGTAGCACTG---ATGTTTCTATTTCTGACCTACACCTTGCATTTTATGCAATGTCTTTGTAAAAACCAAGGGCAAGAACAACCTGGAGAGAAATTTTCAAATTTTGGACCAGAGCCACCAAATCAATAATGGCAGAACAAAATGAATTATCAACCTCCACTGCTTCAATCACAGGGAAAGGCAAGGAGTTAGCCAAAA-GAGAAACTGCAGTCAATGTTAAGAAACAGAATGAATTGACTTTGAGGTAGGCTTATATCTAATTAAATGAGACTGGG chr4 - 94230402 17811462 17811461 17813324 76417079 76417078 76418941 1863 AATGGAATTTAAACTGATCAAACCTATATGCTCATAACAGACCAAATATTCCTGACACAGGAATGATAGAGGTTCAGCGTTCAATGATTCGGTAATTCAAAAAGACAGGAAAGAGCTAATCCACACAACCCTATGAATGTCATGACCAGGATTTACAACTCAGTCCGGCACACGACTAAATGACAATGCAATGGCAAAAGAAGCAATAGAACGCATTCCACACAAAACTAGTACTGGCCAGCAACTTACCTGGGTAATTCTCCTCTAT-GCTATTCATACTCTGAAAGGTTTATCAAAATATAAACATGGAATGTAGAG--GAAGTTCGCTAGTACACAACATAAAGAGGCTACGCAACTGCAGGCACAATTCAGGCCAAGCTATCCAGAGCATCTGTTCGCAGTGTCTTGATTTTAACAAGACATTCATGTCTACGTAATAGAAAATAAACTTAGTTATTAAAAATACATCTCATCA------TACAGCAGGTCAAAATGACTGATATATGACAAAACAGATTTGATGAACTGTGTTAGTAATCTTCACAAAGT--------------------TATTCAGCATTTATAATAA-------CTCCAAATCTATTTTCACACTACCTGATGGGGGGCAGCTCATACCATTATTAACAAAATACCAACAACTGATTCAGCCTCTAAGTCAATTCTAT-------TTACAG---TTCGTCATT---------CCATTATAACAAAGCAGCACTGGCAGAGACACA----AGACTTCATCTT--------ATAAATATCATTTTTAACATACAGGCATAGACAGGCAAATACAAACATGTTTTTGAATAAAGGAAGGTGATGTCAC---------------CTAGTAAGGAA--AGAACAGACACCTAAAATGG------AAAACTGCAATTTTACACTAACTCAAACTGTTCACCAAAGCACACACTGTAGAAATACAAGCAAGGCA--CTGAGGAAG--ATGGACTCTTCTCCACGCTACCACGTTCTCATGCAACCCAGTAAATGGTCCCCAGAAA---------------GCCATTCTCTGTGAAATCTGCAGATATCTAACACAGAAGTGAGAAACGAAGTATTTGGGTATACAGTTAAGTCACTG------GGTTTTCTAGCCACAACCTTTT--AACGTCTTACTAACACTGTACATATTAAAGTAGTAAAAAAGCCCAGTGGGGTCCAGTTCTATAACCTTGCACTAGTCAGTCATACTGCATGACGTCCAACAACTTCTCGAGAGGAAGACT---------AACACTCTATGAGTCAAA-------------------------TTAGCAAAGG--------AAATAGGCTCAACTTGCAGCTTGCAGTTAAAAAACAACTGGAAAGACAGTGGCTACAA---------CAGACAGGCAT------ACGGGTC-----TGTTAAGATTTGGTGAGGAATTTGGGTCTT-------CTTTTTTTTTTAAGAATAATTCATAAGCAAGATGCACTATCAAAA-------GAACAGaa-----------tttaaaatttagtattaaatatatataaCTAACTCCAACAC--TTGGACAACTCCTTCACCAGAGAAACAATTTGGGATTTACACAAGTGATGGTCTTGGCAACCC---CCCACAGAGGAGAGTAACGATA--GATACTCTTCACAGGCTACCAA--GAGATCAG---GACGTCCTTGGAAATCTCTCTAATTAACAATAAACCGTTTTTACAATTGAAAATGCACCCTCAAACCCCG--GTGACACTGTGGATACGTCAATTCCTCATCCACATGTTGCACCGTGTGCAATGTCTTTG--GAAATCAAGGGCAACAACAACCTGGAAAATATTTTTCAACATTTGGACTGTTGCCACCAAATCAATAATGGTGGGACAAAATGAATTACAAGATTCCACAGCTTCAATCACAG----AAGTAGAGAGTAAGCCAAAAGGAGAAACCACAGCTTACATTGAGAGACCTGCTGGACTGAACTGTATGTAGACTTGGATCCAATTAAATGAGACTTGG ..::.........:x.x:.x.:....x:x::.:....x....:..:.---......x::----...:....:.xx::xx..:.x..:x:xx........:....:.......-....:..x....x...x.x..........x.x:.........x.x.......:.:..x:xxxxx:..x:x....:....::.:xx..:::x:.x...---::.x.::::....x.:...:.x.x::..x.x:..:x...x:.....xx..:x.:.-.:x...x.x.x...::.:..::..:::....:x..:..:::x:x.:...x--.:.x.::...:--------...::.----------.x.x...x:.x:..:x...xxx:..:.x...---------------------:........:.x:....:.------.xx....:x..x.::x.:.xx:.:.xx....:..-.x..x..::.------..:.:...----.x:.......:.x.x.:---------------...x.:.x...:x.:..:.:.x.::..--------------------....:...x.:x:x..x..-------:....:x.x..x......--..:.....x:x:.:x.:..x.xx:.....:x::..x:.x::...::-...xx.::::.......:....xx..:-------......---.x:x.:...---------....x...x....x:..-.:x..x..::.x...----...x..:.x..:--------....:.:..x:.-----------------.:x.....xx...x.x..-.....:x..x..x:x...:::......:---------------..xx...::..--...:x...x.xx...:.:.x------.xx....:::..x.:::....:.....xx:.:....-------------.xx.x...x...:..:.:.--...:.:...--...x.::..x:..xx:x.:..::.x:.:...:.:..:...:....::.x......x:.---------------.:...x..------...:x.xx:.x..xx....---....:...x.:.xxx.x:..xxx.:.x.x...xxx..x:.x------:..::....-::....x:x...--...:.xxx.x:..x..xx:...:x:..:..x.:...x::..x.xx..x:.--..xx.x.x.x...::::...:.xxx.x.:x.:x:x.x..:.--------......-----.:..x...---------..:.:.x.x.:..x...:-------------------------....:..x.:--------:..x.::...x...x..------..x....x..x..x.x:.:x.xx:..x:x...x.:---------....x.:....------....:.:-----.x....:x::.:.x.:..---.x.x.x...-------..xx:x...x.......x.--x:x...x....:-.x.x:.x....-------..:.....-----------:....x..xxxx...:xxx:.:...x.:x..x..:x..x..--..:x....x.....:.:x..:...-:.....xx..x:.:x:xx..xx........xxx..:..---.:..xxxx:..:..:.x:x:..--..x:x.:..:x.x:..:....x--....x:x.---..:.:..............x.............:..x:...:..........:..x.......x....::--..::.....---..::x..x...:..x.:.:...:x.....::x.:.............--:...:.........x...........:.:x.x.......xx.......::xx...................::.:.............:x.:x:.....x.............----.:.:.::....x........-.......::...::x.::..:...:..xx:x..:.:...x:.xx.x....:...:x...:..............x.. 47M3I9M4I49M1I97M3I55M1D50M2D11M8I6M10I31M21I19M6I34M1I10M6D8M4I17M15I27M20D19M7D18M2I46M1I27M7D6M3D9M9D17M1I15M4D12M8D12M17I18M1I28M15D11M2D20M6D36M13I19M2D9M2D58M15D8M6I19M3I41M6D9M1I12M2D50M2I41M8I6M5I8M9D18M25D10M8D17M6I35M9D11M6D7M5D18M3I9M7D19M2I12M1I11M7D8M11D41M2D24M1I38M3D22M2D22M2D8M3D70M2D9M3I47M2D113M4D20M1I77M 1085/1710 63.5% 1863/94230402 0.0% 377/1710 22.0% 6422389 NA +8727 chr4 + 190214555 24236564 24236563 24237200 637 CTTCTAGTTACACCTGTACCC--------TGCACTAAAGAAAATTGCACTAAACTGTCATGTCAGACGGTCCTATCAAAGCAGCAGCA-----------------------TTTTTCTGC---TGTGCCCTGAGCCTTTCAAACACATACTCACATATCCTGCCCCATCTGCAAACACACAGTGTTCTTTAAATGTGTACAAATGACACCTAGTGTTTTTGAAACACTCTTAAATAAGCCCAGGATGACTCACCATTTTTCTGGTCTTGTA-----------------------------------CAGCTACTTATATGTTCGAAAATCCCCTTAAAAGTTACAAAAGTCTGTCTCAATACTTTCAATGCATTTAAATGGCTAAAAGGTTAGACATGAAGAAGCGGGACTGGAAGGCCAATAAGAAATTAACATGCGCACTGAAAACAGTCTTTGGCCCTTTTATAGAGCTACATTCACAAGAGTTGTGCATGTGCTTAGC--------AGGAAATTATAGATCTTATTATTGGGGAATTGGGTGGCAGGTGCCAAAAACATGTAAATTCACTCCATTTCCAATTCATGAAGCCTTTTGTAGCTTGGTACTATGGTTTTATTAGATTTGTACATTTAGCCCAGAA-CCTATTATTATAATAAAATACAAAATATAATTATTGTTTTCTTGCAGTGGGAATCTCAGAATTATCTA chr4 - 94230402 17814793 17814792 17815453 76414950 76414949 76415610 661 CTTGTGCTTACACTTGTATGGCTGCTGGGTACACTAGAGAAGATTACATTAAACTTTCATGGCTGATGCTTAGGTCAAAGAAACCGCAGAAAGCTACAACATAATCTACTGCTTTTCCATAAATGCACTGTGAGCCAGGCAATCAGACGTTAACGT------------TTACAAACACAGA-----CTCAAAATATATATACATAATAGGGAG-GCATTCAGAATACACTTGAGCAGCAACAGACAG--CGATCTTGATTTTAGCTTTGCATTATTGAGTCTTAATTTCCAAATATAATTTGCCATCCTTTACTTCCATTTTC-----TCCCTACAAAAAGGATAAA---CTGCTCAAATAATGTTGATAGCTTTAAAAATCAACAA--TCATACGCAAAACAGTA--CCTCGTAGACTAA--ATAAATGAAT-------CTGAAAACATCCTTTA-CTCTACTTTCCAGTTGCTTTCATTAAAGT-----ATACAGCTAGCTCTAACACAGGAAATTATAGACCTTCTC---TGAGAAATGTATGTCAGGTGCCAAAAGCATTTAAATTCTATCTTTTTCCAATTCATGAAGCTCATTGTAGCATTGTATTGTTGCATTATTAGATTTATGCATTTAGCAAGCAAGCATATTATAAGAGTG----GCTGTAAGTAATTACTCCTTTCTAACAGCAGGAACCAGAGTATTGTCCA ...x.:x......:....:xx--------.:.....:....:...:..:......x.....x.x..:.x.:xx:......x.:.x...-----------------------:.....:::---..::.:x......xxx...x..x.:::.x..:.------------:.:........x.-----..:x....:.:..:.x..:.:.xxx..-.:x..:::..:..x...:.::.:xxx...:xx.--:x.:.x.xx..:.:.::...:.-----------------------------------.xx:.....x:..x...-----....:x:....:xx.:...---...:::x....x.x.::..:xx......x:x.x.x..--.:.x..:::..:x..::--x..x.x..:.:..--.x....x..:-------.........x:....:-.:..x:.x.xx..:.:.x....:x.:...-----..:::x:....--------.............:...x.:---x.:...x..x:..x............:...x.......xx..:x.................::x.......x.x...:.:.x.:x...........:.:........xx:x..-.x......x.x.:.:----:.x:x.x:......:.x:.....x:...::....:.xx..x...:..:. 21M8I59M23I9M3I33M12D13M5D27M1D33M2D22M35I17M5D19M3D37M2D17M2D13M2D10M7D16M1D29M5D11M8I20M3D113M1I15M4D49M 378/583 64.8% 661/94230402 0.0% 132/583 22.6% 6421771 NA +3149 chr4 + 190214555 24238747 24238746 24238816 70 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCATGTACCCATATCCAC chr4 - 94230402 48414296 48414295 48414365 45816038 45816037 45816107 70 GTGCATGTGTGCTTTTGTGTTAATAATTGTATAGATGTATGTGTGGGTGTATGCATGTACACGTATTCAC ...::......:x.x.....xx:.:xx...:.:x:...:......x.....x........x.:...:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -24175549 -70054853 +12689 chr4 + 190214555 24240274 24240273 24240701 428 GGGTGTCAGGTGAGAGGAGGACTTGAATGC-----TTACTTCTCTTTTAATTATCTGATGCTCACACTACCCTC-CTTTGTTGCCTTCAGCCAGAGCTGATAAGAAAAGG-----CACCAATAAATATCTTGGCAG-----TCTGAAGGGAGA-----AGCCATGTTTCATGGGACTCCCTGCTTCTACAGCTGT-TGTTAAAATATTACTGCTAATTAGCTGG-CTAGTTATATATAAACCCTTACAAAGGAGTATTTTTACACAATCATAAAATAAATTAAACTACCAAAAATTCACGCTGTTAATTAAAATAACCCCTGTAGGAGGGGGAAAAATCGCTACAAGGCTGAGGTAAAC---AGGAGGCAATTTC-----------ACAAGCACAAACTGATTAATTTTATTTCCCA-TTACATGTATTTGCTAATATCATCAAAATTGGGATATAAAGCAATTTT chr4 - 94230402 17816497 17816496 17816953 76413450 76413449 76413906 457 GAACGTCAGGAGAGAAAA----CTGAGTACGTTTTTCATTTTTCTTTTAATTATTTGATCATCACTTATTCTTCACTCTGCTTTTACCAGCTAAAAGCAATAAGAAAATAAAACACGCCATCAACTATCCTGTTGGAAAGGTACAAAAAGAGAGCAAGAATTGTCTTTTATGCAGCACCTTGTTTTACTTGTTTTATTTTGAAATATTATTGCTGAGCACCTGGGCTGTTTCTAAATAAGCCTCTCTAAAAGAGTATTTTTACACAATCAAAAAATAAATTAAACTATCTAAAATTCATGCTGTTAATTAAAATAGCCCCTGTAGAA--AAGCAAATTAACTACAAAGCTGAAGTAAACATTATGGTGTTATTTCTTTTATTATTTAAGAGT---AGCTGATTAATTTGCTCTCCTATTTACATATATTTACTAGCATTATCAGAACCTGATAAAACCACAATTTT .:::......x....::.----:...:.:.-----.:.:..:............:....xx....x:xx:.:..-..:..:.x::x:....:.:.:x::.........x:-----.:...x:..x....:..x::.-----.x::..::....-----.::::.x...:...x::.x..:..:..:xx:x.:.x.-.x..:........:....:.x:.x....-..:x..x..x....:..::.x:...:...................x................:.x........:................:.........:.--::.x...x.x:......:.....:......---.x.:x.:x.....-----------.x:..:---.:...........xx.:...:.-......:.....:...::..:....:..::x.:xx.x.xx:....... 18M4D8M5I39M1I35M5I21M5I12M5I37M1I28M1I102M2D30M3I13M11I6M3D22M1I48M 291/419 69.5% 457/94230402 0.0% 47/419 11.2% 6423777 NA +12286 chr4 + 190214555 24254705 24254704 24255008 304 ATGCTTTTCAACATCAGCAAGCTGCATATTGTGATGAGAACATAAAGTTTCCAATTATTGAAATTCCATAGTGTATTTAATTATGCAAT--TATCTCATTGTATTAACAAGTGCTAGAGCACAGCAGCAATTGCTGAGATTTTTACAATTTGGAAGAGCAGAATTTATTCTTTCCCTCAGCTGATTACTTCTCATAAATCTGTCCATTTTTCAGGGATTATGGAAATGATCCTATTTTTGGAATGCTTCATTCAGAAATCCAAAGCAAGTCAGCACCCCCACTCTTGCCACTCCAATTTTTAAGTA chr4 - 94230402 17823421 17823420 17823714 76406689 76406688 76406982 294 ATGAGCTTGAACAACAGCAACGTGCATACTGTGACAAGGAAATAAAATTCCCTATTATGGAAATCCTACATTGTATTTAATTATGTAATTATATTTTATTGTATTAGTGAGTGGTTGGGCACAGTATCAACTGCTGGGATTTCTGCAAATTAGAAGCACAAAATTCATTCTTTATAACAGCTGATTACTTTTTATGATTCTATGGGAATTTCTGAG-CTATGGAAATGATTCTATTTTTGGCCTATTTCTCTTAGTAA--------AAGT---GATCCCCTCTCCTGACATCATAATCCACAAGCA ...xx:..x....x......xx......:.....::..:.x.....:..:..x.....x.....:.:.:.x..............:...--...:.:.........:::....x.x.:......:.x...:.....:.....:.:...x..:....x:..:....:.......x:xx.............:.:..:.x...:.xx:xx....x.:.-:............:..........xx.::...x:.:..x..--------....---x.:....x...:..x..::x:...::x:...:. 89M2I125M1D41M8D4M3D33M 211/292 72.3% 294/94230402 0.0% 14/292 4.8% 6431284 NA +23991 chr4 + 190214555 24260091 24260090 24260698 608 GTGATAGGCCAAATTATATTCATGTTTTTACATT----TTCTGATTTAATAGCACTTACTAAGTATAA---GCTTCTCTCAAAGGTAGCAAGGT-CATCATTTCATACTAAGCAAAGTAGGAATGCCGGAGGCAAGAATGTGCATGTCTGTCTACGTCTACAAGCACACCGATTTTGGACACACAACACAGTGATCACTGAAACCCTGTTCCC-----------CCATCCTCACTCTCACACCACCAACATATGACAGACATGCAAAGAAAGATGCCACATCAGCTGTTTATGGCATCTTGAGTCACAGACACTCCACTTGGGTCTCTAAACAGATTTCTTGTTTACTTGCACATTAATAAAACTCACACCTTCGCCAGTCAGAATTTTTTCCCCGAGCATCTGAACATCCAAAGAGATTTAGAAGCAATTAACATTCACGAGTAACAGAGCAATCAACATGGGAATCGCTAATGGGACTGGACAGGATCCAAGAGCTGATATGAGGATAATAGTGAGTCCCTGACATAA-GTTATGGTGTTAATTCTGGAGGGCAGAGTCGTGGTATGTTTTCAATAGCTTTG--TGGGGCTGCTGTCACAATCACATATGCCTCTCCTATACATGGTT chr4 - 94230402 17826523 17826522 17827134 76403269 76403268 76403880 612 GTGACAAGCGTTGCTATAACCATATTTCGACATCATCATTTTAATTAAATAGT-CCCACTAACTCTAAAAAGCATCT-TAAAAGGTAATAAGGGGCATCATTTAATGTCAAGCAGA-CAAGAATCCCAGTGGGACAGATATGGA-----GCCT---TTTCCAAGTGCACTGATTCAGGACAGGCACTCCCAGTATCATTTAAA---TGCTCACAGTCAACATGGCTTACCCCGCTATCTCATTACCAAAACGTGATAGACATGCAGAGAAAGACGTGAAATCAGCTGTTTAT---ATCTCATGTCGCAAGCACTTCACTCAAATCTCTGAACAGATTTATTATTTACTTGCCTGTTAATAAAACTAGCAGCTTTACCAGCCAGTACTTTTTCCCCAAGCTTCTGAAC-TCCGTTGAGATTTGGAGGCAATTAACATTCACCAGTAACAGAGCAATCAACATGAGGATATCTAATGGAACTGGACAGAATCCAAAAACAGGTATTAGGATAATAGTGAGTCACTGACATAAGGTTATGATGTTAATTTTGGAGGGGAGAGCAACAGTGAGTTTTCAATAGCAGCGTCTGTGATTGCTGTCACATTAACACAACATTATTTTCTATATGGCT ....:.:..xxx::....x:...:...:x....:----..:.:...x.....:-.::.....x.x...---..x...-.x.......::....x-........x..:::.....:.-:.:....x..:.x..x.x::..:..x.-----.:..---.:.x....::...:....:x.....x:..x:x.x:xx....:.x...---..:..x.-----------.:xx..:.:..x..x..::.....x.::...:.........:.......:.:x.x.............---....::x...:..::....:....::::.....:.........x..:.........x::...........x:..x...::....:...x.:.........:...x.......-...:xx.......:..:...............x.....................:.:..xx.......:.........:......:.:.x.:...x................x.........-......:........:.......x....:x:::..:x............xx:.--..x.::..........x.x...:.xxx:.x.::.x..:....:. 34M4I15M1D14M3I6M1D16M1I21M1D27M5D4M3D47M3D7M11I68M3D112M1D122M1I53M2I44M 435/590 73.7% 612/94230402 0.0% 40/590 6.8% 6433568 NA +3491 chr4 + 190214555 24263407 24263406 24263508 102 TGTAGTGGATTCAAGAAAAATGACATATGTATACACACATGTGGGTGTATACACACACACACACACACACACACACACAGAGTTGACCCTTTAACAGCACAG chr4 - 94230402 14964811 14964810 14964903 79265500 79265499 79265592 93 TGTTGTGGACACAAA------TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGAC---TGAATAGGACAG ...x.....:x...:------x.::.x..::.:::....:...x:......:...xx........::............xx......---.x..:..x.... 15M6D66M3D12M 67/93 72.0% 93/94230402 0.0% 9/93 9.7% 9298596 NA +3261 chr4 + 190214555 24263432 24263431 24263484 53 TATGTATACACACATGTGGGTGTATACACACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::..:.:.....:...:x..:......xx........::............. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 9298600 NA +3405 chr4 + 190214555 24265842 24265841 24265917 76 AAGAATAGAGAGAA---AGAGAGAGAAGGAAGAAAGGGAG-GGAGGGAGGAAAAGGGGAAAGGAGAGAGGAAAGGACTAA chr4 - 94230402 40465789 40465788 40465867 53764536 53764535 53764614 79 AAGAAT-GAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAA ......-....:..---.....::x....:::..x...x.-.........:....:...........:.....:::.x.. 6M1D7M3I23M1I39M 59/75 78.7% 79/94230402 0.0% 5/75 6.7% -16199947 -78030455 +12665 chr4 + 190214555 24267629 24267628 24268036 408 CATGGTTCACTGTCCATCAATGATTAGCATTTTATACTCATGACAATCAAACTCATACTTTACT-TTTAAAGTTTTAGA-----AGGAACACATATTAAAAACCAAAATGAAAACAGG-GCATCATAAGTTCAAGGAAGCCACAAAGTAGA---------------CCAAGAAGCATA--------ATTCTACT-ATGCACCATTTTATTAGCTAATCAACGTGTCATTTTTTTTTCCTATGGGCACCTACTTACTGTCTTGTAATTTCCATAAGGGCACCATCTGTATTTATAAAAGAATTATCTTTGTGGTGATCTAGCAATCTACAAACAACAGTGATATTTAACTTTTCTTAGGGGATCAACTGTAGAATTAAGTTAAAGGATT--TATAAGTCTCTTTGTCAGGATGAACCTTAAAAGGACTTATTCATACATCTC chr4 - 94230402 17837625 17837624 17838060 76392343 76392342 76392778 436 CATGATGAAGAGCTTATTGACAACAAGGATTTTCCACCCACAACAATGAAAC--ATAGATTACTGTTTAAAAATTAAGAGTTCAAAGGAATTGCTTAAGAAGCAAAAGCGGTAATAGAAGCATATCAAAGCTAAACAAGCAATAAATAAGATGGTATGAAAACTGTCAGAGCAACTTAGCATCCCCATTCTATTTGTGCTTCATTTTATTAGCTAATCAAAGTGTCATATTATTT--CTACTGGCATCTATTTACTGCCATGTAATTTTGATAAGGGCACCATCTGTATTTATAAAAGCATTATCTTAATAGCTGTCTAGCAATCTACAAACATAGGTGATATTTAACTTTTCTAAGGGGATCAATTTTA-CACCAGGCAAAAGGACTGATATAAGTCAATATGCTATGTTAACACACTGAGGGCCCTATTTGAATCTCCC ....:.xx.xx.:::..::.::.:x..x.....x:..:..::.....x....--...xx.....-......:x..x...-----.:.:.xx:::x.x.:..:.x...::.:x..:..:-....xx:..:x::..:x....x.:...xx...---------------.x:..x.:.x..--------......:.-:...x:...................x.......x..x...--...:x....:...:......:.x........:x............................x........x:.:.:x:..................xx:..................x..........:.x..-x.::.:.:x......:.--........xx.x..::.x.x.:.xx.x:x:.:..x.:....::x.:x..:. 52M2D10M1I14M5I34M1I32M15I12M8I8M1I40M2D133M1D17M2I51M 283/403 70.2% 436/94230402 0.0% 38/403 9.4% 6430004 NA +11457 chr4 + 190214555 24270935 24270934 24271165 231 GTGTCAAATACACAGTATAATCATTTT-GTATGATCATGGCTAATACGGTTCAATCTAAATTGCAGTCTCATATTTGACATA---ATTATACATAACCAAAAACTAATAAAAATCGCTGCCTTATATTTCAAATTGGTAATTATGGTAGTAAACATTAACAACATGTCAGATATAAGATGGTGATTTG--TTCTGAAATGTATTAGAAATCATTATACTGTATGATAATTTTAATTA chr4 - 94230402 17839107 17839106 17839341 76391062 76391061 76391296 235 GTGTCAAATATTC-TTAGAGTGATTTTAGTACAATCATTTCTAATACATTCCAGTGTTAATTGCTGTCTCCTATTTGACATAGTAATTATACATAACTGAGTAACTATAAAA-TTGCTGCCTTATACTGCAAATTAGTAATTATAGTAGTAAACATTAACAACATGCTATATAGAAAATAGTGATTTGTATACTGAAATGAATTAGAAATAATTGCAATGTGTGATAATTAAAATTA ..........:x.-x..x.:.x.....-...::.....xx.......:x.:..:.x.x......x.....x...........---............::.:x.x:x......-.:...........:.x......:........:.....................::.x...x..:..:........--.x........x.........x...::.x...:........xx..... 13M1D13M1I54M3I27M1D75M2I47M 184/229 80.3% 235/94230402 0.0% 8/229 3.5% 6431828 NA +22074 chr4 + 190214555 24272732 24272731 24273378 647 AATATTCAGGGGAACAGACCAGACTGCTAATTAAGGAACTGTCTGAAACCACCATGAACCACATTTCCACTGGTGCAATAAGCAAAGACTCTTCATTAAAATCACTGTCCTCTGTAAGGGAAAGCTGTTTCC-AGTGCAATAGATCTAATTCACAGGTGTGATCATGCAGACCCAGGTACAGTATTCATTATTAATT---TAAAAAGTATGC--CAAATCAATTAAAAACCATTTTAAAGGGAAGGAATAAAATTTAGTTCTACCTAACTGCAGCTCAGCTCTAATTTATCTTCCAGCCACTTTCAAGGGATTTTACTT-GGTTCTTAATCGAACATTCATTGGAAAGGGTAATTCTCATGAAATTACAATGGCATCTCTTGCATCGTTTAAAGCAAATGTTCCCATTCTTTGGAAATCGAGAGCAGCTTCTCCAATAAAGACTCCCTTCAAAGTGTAAAGTGGGAGAGCTT------GGGGAGCTGCTTGAGAAG-AATAAAACATTGCAT-TTCAGAAGCTGCTCAAATTTAAAACTCTGCCCGCATCACTATGACAAATTGTATTCCAAATATAGGTTATTCACAACATGTTTGTTATAAGGCGAGGCATATGAATTCCTGTCGTGTCTTTC-TTTACAAACATGTCAAGACTTGTGAAC chr4 - 94230402 17840192 17840191 17840839 76389564 76389563 76390211 648 AATATT-AGTATAACAG--TAGAGCTCTAATCAGAAAACAGTCCAGACATATTATCAGCAACAG----AGTAGTGAGAGGGG-ACAGCCCCTTTAT-GAAATTGTTTTCTTTGATAAAGGGA----GTTTCTTAGTGCTGTAAATCTAACTCACATGAATGATCATACAGCCAAAGGTACAACACTCATTATTAACTAACTAAAGAGTATGCACCAAATCAATTAAAAACAATCTTTAAAAGAAGGTACATAATTTAATTCTACCTACGTAGAGCTCTGCTCTAATTTATCTTCTGGCCACTTTCAAGGGATTTTACTTAGGTGTTTAATCTAACATCCATTGCAAAGGGTAATTCTCATGAAATTGCTATGGCATCTCCTGTATCACTTAATGCAAATGCTTCAGTGCCTTAGCAATGGAGAGGAGCTTTTTCAATAAAGACACACATCAAAGTGCAATAT-GAAGTGCTCTCTTTGTTCAAGTTGTTTTAAAAGCAGCAAAATGTTTCACAGTAACGAGACACTCAGACTC-TAACACCAGCTACATTTAGATGACAAATCGCATTCCAAACAGTGAATGTACATAGCATGTCCATGATGTGACAAGGGATATGGGCTACGGACATGTTTTGCATATAAAAGCACGCCCTGCCTCATGAAC ......-..x:x.....--:...x:x.....:.:::...x...:::.xx:.::..x.:.x...x----.x.:...x:.x::.-.x..x.:...:..-:....:::.x..:.:x:...:..:.----.....:-.....x:..:......:.....x.x:.......:...x.xx.......::.:..........:.---....:.......--................x..:..x..::.....x.:.x......:.........xx.:x.....x................::.......................-...x:......x.....:.....x......................:.x..........:..:...::....x.......:.:.x:.x.:..:.x...x.....x.....:.:..........x.x.x........:..x:.-.:..x...:------xxx:..:..:..x.:...-.::....::..x..:-x.x.x:..x::....:.:.:-x...x.::x.::...:xxx.........:.:........:.xx.:x.:.x..:.:.....:::.x..:x.:.:...x.....:::.x.x.x.:...:..x.-.x..x..:..:.:.xx.x..::..... 6M1D10M2D45M4D14M1D13M1D25M4D6M1I64M3I12M2I105M1I142M1D9M6I18M1I15M1I20M1D101M1I27M 446/632 70.6% 648/94230402 0.0% 31/632 4.9% 6432540 NA +37817 chr4 + 190214555 24275086 24275085 24276200 1115 AAGTACTGCTTCAATTTTGGAAAGAAATATTTTAGTTTCACATATGGCCAATATCAGCACCAACAAATCAATCATTTGAAATTATTATCAATCTTTTGTCTGTACAATCAAGTAAGTAGGAGCGTGCTATTTAAATACGTTTACTTACACACAGCACAACTCTACTGGCATCAGCATATTACAAAAACCAATTTTCTTACATCAACTTCCATCTACTTCTAATTCTGTAGCATAGCTCTGGGGAGTTGCTACAAGGTCTGTGTAAACTGAAAACCTAAATAACATTATGACGCCTATTACAGAACTAATTTATAATCTAATACCCCAGTTGAATTTAATATCCTATTTATTTATTCAAGCAAAATATCTGGAAAA-ATATGTCACATCATAATGTAGTTGTTATGAAAAT-GGAAAAATAAGGCAGAATTTTAGAGAAAGCACGA---TAATTGCTAGGGACAGGTATGAGCAAGAATTTCAGATCCCC-----TCACATGAGGAAGAGGCAGGAACCCTTTAATAAATAGGATTTTTGCTTTAGAATGCAATTATTGTCAAATTTAGTATTTTACATCAAATTTACAACTTTAAAATGTGATTCCTATTAATGTTATCTGCTCAGAGCTAGTGCAGCATAAAACT---------GTTGGCCAAGAGATGCCACCTCATCAACAGTCTTTAACAACTCCATTCCCATCCTGGATGGAAGAACTGAGCTTTATGGCAGCATTTATAAGCATGCACTGCCAATACAAATGCACAAGTGATATGCATATATATAATACACACAGGCTAATGGGAA-GAACTATAGAGCTGCTTCTGTGAATACGAAGTTT-CATACTGATTTCTGCACCTAAGATAAAAGGAGGGAAGC-------------------GAGAAAGAATTGAAGGAAATGAGGGAAGGAAAACATGACATTTGACATTGCAAAGCTACGGAAAGCATAAATATAAAAACACTACAAAGTGATCGTTACACCCTATAGC---------------------TGAACGCTTTTAGCCATCCAGGAAGCAGAGGGAGGACTTAATGAAAGTTTAGTGGGGCTCAACAGTACATTTACACTAGAGTTCCGAAGACTCAAAGAAAGGGCAGCAGCCA-CCTTCAATCACCTGAATCCCTCCAGTAAA chr4 - 94230402 17842364 17842363 17843478 76386925 76386924 76388039 1115 AAATATTGCTTTACTAGGGAAAAGACACGGCCATGT---ATGCATAGTCCATA----CGCCAACAAATCAGTAATTTGAAATCATTAACGATCTTTAGTTTGTACAACAGAGTAAGTAAAAACAT-TAATTTAAATA----TCTTTCCACACAGCAAAACTCTACTGACATCAGCATATTACCAAAACCAATTTTCTTACATCAGCTCACATCTTCCTCTAATTCTGTAGCATAGCCCTGGGGAGTTGCTACAAGGTCTGTGTAAACTGAAAATCTAAATAACATTATGACGCCTGTTACAGAACTAATTTATAATCTAATACCCTAGCTGAATTTAATATCCTACTTATTTATTCAAGCAAAATATCTGGAAAATATATGCCAAATCATAATGCAGTTGTTATGAAAATGGGAAAAATAAAGAGGAACTTTA-AGAACGCATAATAGTAATTGCTAGGGACAGGTACAAGCAAGAACT---GTTGCCTGTGCATCACATGAACAA-AAGCTTCAGTGCCTTAATAATTGGAATGCTTGTTTCATAATTCAATTATTGACAAATTCAGTATTTTACATCAGATCTGCAAACTGGAAATGCTCCTTCAATTAATGCTATTAGGTGCACACTACTGCAATATGTAACTTGTCAGGTATCTGACAAACAGTTACTTCCTCATCAATCACCTTTAATAACTTC-TGTTTTTCCTGGATTGAACTACTGAGCTTCATAGCACTATTTACAAACATGTGCTTTCAATATAAGTACA-----GTCATACAAGCATCTTA-ACTTTCAAACTAATGAAAATTGACTATG--------TCTGTGACTAGAGAATTTACCTCTTAATTTGCCCGCTCTAAGTCCTTCCATGTGAGCACACCTCTCATTGTTTTTTAAAACACAGTTTTATAAAA------------------ATGTTTAGGATCACA-----GCAGGAGACAAAAAC----AAACAGGCTAAAATGATTCACAAAACATTTTGCTATTGAAGTGTCACTGCTGGATAAGCCCTGTTAGTTAGCCTGGCAGCAAC---AGCATTTTATAAAAACTTTGCAGACCTGAACCGCATATTTATATGGCAGAGCTGAATGCCCAGAAAAAGGACAGCATCCATTTTTTAGCCAACTTAATACCCACCGTGGA ..:..:.....:.x.xxx.:.....x.::x::xx..---.:::..:.:.x...----.:...........:.x.........:....x.:......x..:.......:x:........::.:.:.-:x.........----.x:..x.........x..........:..............x.....................:..:x.....x.:...................:....................................:.....................:.............................:..:................:.............................-.....:..x.........:...............-..........:.x:...:....-....x...::.---...................::........:.---.x.x..:-----........:x..-.:..xxx.::x.:.......x.:.:..x:...:..:.x...x.........x......:..............:..:.:...x:.x:.....:xx:.:.x.......:...:x.x.xx:x:...x....::..:x....---------x:..:.x..x..x.:.:x.........:x::......:....:.-.x:::x........x...xx.........:..:...x:.....:..:....::..x:.....:..:.:..-----.x:..:..x::..x.x.-..x:x..::......::..-x:.....:--------.......x..x::.:...-.x.x:.:....x:x.:.::x.::.xxxxxx.x.x:...-------------------:.:.x.x.:..xx.x:...------------------.::...::x..::..-----:.:.:.::..x...:----.....xxx:...:....:xx:.x.x.x.x.x..---------------------.:.:.x..x....::.x..x..x....:x---..x.:..x..:...::..x.::.:x..x...x.:.:.....:.:x:x..xx.:...x:.:..:.:.....:.....x...-::..:.::..x..x...x..:x.x..::. 36M3D14M4D68M1D11M4D234M1I34M1I22M1D11M3I31M3D7M5I12M1D139M9I44M1D70M5D17M1D19M1I8M8D18M1I38M19I19M18D15M5D15M4D33M21I29M3D80M1I29M 761/1053 72.3% 1115/94230402 0.0% 124/1053 11.8% 6432722 NA +3051 chr4 + 190214555 24289212 24289211 24289266 55 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAGT chr4 - 94230402 76845945 76845944 76845999 17384404 17384403 17384458 55 TCCGTTTCTTCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAAT .....:..xxxx.x................:...............xx..x..:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -52556733 -41673669 +3115 chr4 + 190214555 24289225 24289224 24289271 47 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAGTTAGCT chr4 - 94230402 87676347 87676346 87676393 6554010 6554009 6554056 47 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTGTT ...............:.:................x..x..:.:x.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -63387122 -30843280 +3116 chr4 + 190214555 24289226 24289225 24289271 46 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAAAAGTTAGCT chr4 - 94230402 48383086 48383085 48383131 45847272 45847271 45847317 46 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGGCAACCAGCT ..............................x..:.::x.:::.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -24093860 -70136542 +3013 chr4 + 190214555 24295992 24295991 24296072 81 ATATGTGTATGTATGTGTGTATATATATGTATATGTGTGTATATATGTGTATGTGTGTATGTGTATATATGTGTATATGTA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.:...x.....x..x.x....:..:..:x.x...:..:.:x..:.........:x:.:.x:..:..x..:.::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -57105301 -37125101 +3040 chr4 + 190214555 24296047 24296046 24296113 67 TGTATGTGTATATATGTGTATATGTATATATGTACATATATACACACATACAT--------ATATATGTACATAT chr4 - 94230402 4481679 4481678 4481753 89748650 89748649 89748724 75 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .........x.x:..:.:x:.:...:...:..:...x.:.......:x:....--------...........:.. 53M8I14M 50/67 74.6% 75/94230402 0.0% 8/67 11.9% 19814368 NA +3050 chr4 + 190214555 24296088 24296087 24296150 63 ACACACATACATATATATGTACATATATACATATATACACATGTATATAGATACACACACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG .:...x..:....:.x.....:...:.:..::..:..:...x::.....xx...:...:.... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 16699675 NA +3370 chr4 + 190214555 24300283 24300282 24300361 79 TTTTTCCTCCTTTAAGCAATGGTATTTTTCTATACAATAGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 51354257 51354256 51354335 42876068 42876067 42876146 79 TTCTTCCCTCTCTCATCAGATTTTTTTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTT ..:....::..:.x.x..:xxx.x......x..x.x.:....x......x..x..x..x...:......:......... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -27053974 -67176428 +3219 chr4 + 190214555 24300320 24300319 24300381 62 TAGCATTTTTT-------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTAAGTTAAAAA chr4 - 94230402 83188923 83188922 83188991 11041412 11041411 11041480 69 TGACATTTCTTCAGCTGATTTGTTTTTGTCTTTTTGTGTTTTTTGTTTTTTTTTTGCTTAATTTAAAGA .::.....:..-------...x.....x.:.....x.x......x................x.....:. 11M7I51M 51/62 82.3% 69/94230402 0.0% 7/62 11.3% -58888603 -35341799 +33759 chr4 + 190214555 24303181 24303180 24303803 623 CAAGATAGGAGTTATTTTTGAGCAAAAGGGAGGGGCAGAAGACAGAGAAGAAGTTATTTACAGAAATTAGTTG---CAAAGTAAAAAAAATATGAGTCTAAATGGAGAGATTATCAACATAGA--AAGATGTGTTAGAGTCTAATAAGAA-GACACAACACACGCAGTACATCTGAATATAACCATTAGCAGCATGGGAGAGAAGCTGTTTACTGTATTAAAGCTACCTTTACTGG--------------CTGTATAAAAACAAAAAA--------------------GGATTGTATTGGGGCCATCACACTCCCATCTTTTCAATTACAGAAATAGAACAATCTCAGATTCCAAAGCTAACTACAAATCAAAATTGTGTTATGTTATCTACTGAGACACAAATGGAAAATAAATACTGTTAACTGTCACTTTCCATTAGGTAACAGAAATTCAATTACATTTCAAACAAGCCTCCATGTCAACAGAATAAATCTGTTTCATAAGTGAGCAGGTAACCATTTTTGATTCCAACTTTCCAAAGGGAAAAAATCAATTTTAATCACAATTCCTCAATTTTTTTCCATATGAATGTTTTGGAGTAGAGTACATCATCTGGTCTAATAAACAGTGTTGT-----ACAAAAGAAGAAGAAAAAAAAGCAAAAA chr4 - 94230402 17855142 17855141 17855780 76374623 76374622 76375261 639 CAGAAAAAAAGTTATTTT---------GAGGTGGGCA-ATGAAAGGGAGGCA-TTGCTCATACAAATTAGTTGGCACAGAGT-------------GTCTAAATGGAAGAATTATCAATCCAGATCATGATGTGTCAGCTTCTAACGAGAAAGGCAGGATGCAAAAATAACATCTCAGTGCAAGCATT--TAGC-CAGAATAGATGCTATTTACTTTACTAATGTTGCCTTTACTGGTGTaagaaaaaagacaaaataaaaacagaaaaaaaaaaagaaaaaaaaaaaGGGATTGTATTAGG-CCATCACGCTCCCATCTTTTCAATTACAGAGATAGAACAATCTCAGATTCCAAAGCTAACTACAAATCAAAATTGTGTTATGTTATCTACTGAGACACAAATGGAAAATAAATACTGTTAACTGTCACTTTCCATTAGGTAACAGAAATTCAATTACATTTCAAACAAGCCTCCATGTCAACAGAATAAATCTGTTTCATAAATGAGCAGGTAACCATTTTTGATTCTAACTTCCCAAAGGGAAAAAATCAATTTTAATCACAATTGTTC-ATTTTTCGCCATATGAATGTTTTGGAGCAAAGTACATCATCTGACCTAATAAATACCATTGTAGAGCACCGACAGTTAAGAAAAAGGGGCAGAGA ..::.x.::.........---------.:.:x.....-.x..x..:..:.x.-..::.:.:.x..........---..:...-------------...........:::........:x:...--.x.......:..xx.....::....-.:..x:.::..x:x.xx......x.:.::..x....--:...-::.:.x...x...:......x..:...x.:.:..........--------------.x:x.........:....--------------------..........:..-.......:......................:...........................................................................................................................................................................:........................:.....:................................x:..-......:x...................:.:.............::........:.x::....-----..x:.x::xx........:::...:.:. 18M9D10M1D14M1D20M3I6M13D28M2I25M1I36M2D4M1D42M14I18M20I13M1D270M1D62M5I28M 502/594 84.5% 639/94230402 0.0% 74/594 12.5% 6448039 NA +3159 chr4 + 190214555 24305100 24305099 24305200 101 ACTGTAAAACAGAATACATACATATATGTGTATGTATATATA----TATATATACATACACACATATATATGTGTGTGTGTGTGTATATTTATATACTCCCAAAG chr4 - 94230402 73121090 73121089 73121194 21109209 21109208 21109313 105 ACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAG .......xx:x.x:.:...:.....x::.::.::....:.:.----:..:x:.......::.:.x:..:.:.x..:.:....x...:..x..x....x....x.. 42M4I59M 64/101 63.4% 105/94230402 0.0% 4/101 4.0% -48815990 -45414412 +3504 chr4 + 190214555 24305128 24305127 24305193 66 TGTATGTATATATATATATATACATACACACATATATATGTGTGTGTGTGTGTATATTTATATACT chr4 - 94230402 61485361 61485360 61485425 32744978 32744977 32745042 65 TGCATCTACAGA-ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCT ..:..x..:.x.-.....:..............::.:.:x.......:...:.:.........x.. 12M1D53M 51/65 78.5% 65/94230402 0.0% 1/65 1.5% -37180233 -57050169 +4841 chr4 + 190214555 24328312 24328311 24328558 247 TAATTTGGGCTTTTGGAGAGCATGAAAATTCTGTCAGCATTATAATGTCTTCTACCACAGACCTTAATTTCTTCTGTCATGGACAATATGATTAGGTTCAGTCCCATTTGATTGTAGGGAATGTCAGTTCCCATTAACAAAAGAAAAGAGGCACTCAAAGAC--------ATGTTC-CACATTTTT------AACCCTTTAGGCA---GGGAGGATTTTTCCAGCTCAAACTGCTCCTAGGAAATATTTGAAGTATTTAATCACA chr4 - 94230402 17861950 17861949 17862210 76368193 76368192 76368453 261 TAATTTAGGGTGTTGAAAAACACGGAT-TTGTGTTGAGGCCAT---GTGCCATACAATATACCTTAATTTCTCCTGTCACAAAGAGTATCATTCACCTGAATTACAGCTGATGGCAGAATACGTCAGATCCCATTAACTAAAAAAAGAATTCACCAGTAGATTTTACATGATGCTCACATATTTCTGTAGGAGAGCTCTTCGCCACCTGGTCAGAATTTGTCAGCCCAAGGTGCTCATGCAAAAGTGTCTTAGTGACTGATCACA ......:..x.x...:.:.:..:.:.x-..x...:::x:::..---..x::x...x.:.x............:......:::.x.:...x...x:x:.x.:.:x..x:....x.:..::x.:.....x..........x...:...::.xx...:x:x...:--------...:..-..:....:.------:.x.::..x.x..---..xx:..x...x:....:...:x.....x.:x:...xxx.:xx...:x:.:...... 27M1D15M3D116M8I6M1I9M6I13M3I57M 152/243 62.6% 261/94230402 0.0% 22/243 9.1% 6466362 NA +3295 chr4 + 190214555 24339180 24339179 24339261 82 CAAGGTTCATCCATGTGTGTGTGT-------------GTGTGTGTGTATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964790 14964789 14964884 79265519 79265518 79265613 95 CAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:..x...::..:.:x:x....-------------:...x..:..:.::.:.::.:...:......:.xx........::............. 24M13I58M 57/82 69.5% 95/94230402 0.0% 13/82 15.9% 9374390 NA +4011 chr4 + 190214555 24339190 24339189 24339262 73 CCATGTGTGTGTGTGTGTGTG----TGTATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395786 8395785 8395862 85834541 85834540 85834617 77 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..........:......::.:----.....x..:....:...::x..:..xx.:.................x..... 21M4I52M 58/73 79.5% 77/94230402 0.0% 4/73 5.5% 15943404 NA +3127 chr4 + 190214555 24339192 24339191 24339232 41 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.......................:..:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -65482089 -28748313 +3777 chr4 + 190214555 24339193 24339192 24339277 85 TGTGTGTGTGTGTGTG----TGTGTATATATATATATATATATATATATACACACACACACACACACACACACACACATCAGAATTCCA chr4 - 94230402 8395791 8395790 8395879 85834524 85834523 85834612 89 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA .....:......::.:----...:.x..:....:...::x..:..xx...................x.....x.::x..x.:..x:... 16M4I69M 62/85 72.9% 89/94230402 0.0% 4/85 4.7% 15943402 NA +3183 chr4 + 190214555 24339195 24339194 24339246 52 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACACACA chr4 - 94230402 70982629 70982628 70982680 23247723 23247722 23247774 52 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...........:........:....:.x:...x..:.:.:.::.:....... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -46643434 -47586968 +3294 chr4 + 190214555 24339201 24339200 24339259 59 TGTGTGTGTGTGTATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...x..:....::.:.::.:...:......:.xx:.......::............. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 9374375 NA +17678 chr4 + 190214555 24340319 24340318 24341203 885 ACTGACAAAAAAGAACGCACAACTTTGCTACTTAAACGGCTTATTGAAAATTCTGACTGGCTATTTCTCTGTAAGATTTGCAGTGCCTTAGATTTTATACATCCTTTTTGTGGTTAAATTAGTAATAACAGCATTAAAATCTTAAGAACTGTATAGTACTCTATTTAATTATCTTCTCCCATAATTACACTGATTAAACACAGCATAAGAGACCATAAAGATAGATAAAACATTATGGCTACAAAACTTTTTTTTTAATGTCCATAAAATGACTATTAAGCCGTAGGTGACTAAATTAATATCACCCATACAATTTTATGGGGTTTCCGTCCAC----------ATCTAACAGTATCATTTGCCATGATGGCAGATTTTTTTTCATAGCTGTATTGAAACTGGAAACTAACACTTTTCAAAAAGATG---------GGAACGCAGTGGGCTGGCTTGGTCAACTTAGCC-------AAAAAGAAGACAGTTCTGTTTGAACCGTGCTCCAAGCTATGATCTGCTGTATACATTTAAAC-CCGCTGACCACCGAACTCCCTTTCTCATCCACCCGCCACTCCCACTGACAAGCCAATGGGGAACAGTGGTTTAGTAAATTATCCATTTCTTCATTTTCTTCTGAAAGTCATCTCCAGAGATTTTGGGTTATATTGATGGCACAGG---CAATCAAGGAAGCAGATTTTCATTTTCCATCATAGGAATGAGCTTCTGAAACACCCAAGAACTTTCATTCTGTGCAATCCGTGCTATTACAAAGATTAAAGAACATGACAAAAATCT-----CAAGAA--AATAT-AACTCTAAAAGCTAATCCTACGGGAAGGAAAAGAAAACTATTTGGAAGCTTTTCAAATATAAAGAATAGCTCCCCAGGATCATACTTTAGCAATTAAAAA chr4 - 94230402 17868605 17868604 17869443 76360960 76360959 76361798 839 ACTGACGAAAAGGCAC------CGTTTCCTTTTTAATGGTGTATCAAATATACTGCACCAACGTTTTGCTTTG-----TGTAGACACCATGATTTACTAGGTTGTTTC---AGTTACATTAATAGTGATAGTGTTAAAATCCTAAGAACTGAGTAGCATTATATTTAATTATC--CTTCTGTAATTACACTGATTAAATACAACATAAGAGACCATAAAGATAGATTAAACATTATGGCTAAAAAAC-TTTTCAAAAATGACCATAAAATGATTATTAAGCCTGAGGTGAGAAAATTAATATCACAAGCATGATTTTATAGGGCTCCCTTACACTGCTTCCCCTACTTACAGTTATCATCTGCAGTGGCAGCAGA-ATTTCCTCTCAGCAGTAATGAAAATGAGAACTAAC------TATAAAGACGCCGCTATTTGGAACGGA------------GGTCAGTTCAGCCCTCCACACCAAGGGAGAGCGTT-TGTGTGCTTGATGTTTCGGGCAAATGCCAATAAAACACATTAAAACACCCCTGAGCTCTGAGCCCACTGGCTCA---------CACT----------------TGGGTAATATTTGCTTCCCTCGTTTCCTTTTTCTTTATCTTCTTTTACAAATACTCTGCAGGACT------TCACAGCAATGAACCAAGAATCACACAATGTAACAG--TAGCATCTGTTTTCTGAGCAATGGTCTAACGAGAGATCCGAGGATTTTCATACTGGGTGACCAATAGCATTATGAAGATTAAAGAATCCGAAGGAAAATTCCAACCAAGAAGTAATATGAATGCAAAGAGCTAATACT------------GGAAATCTGCCAGG--TCTTCCCAAACAGAAAAGATTGGATTATAAGGTTATGGCTGAGCTAAGAAAAA ......:....:.x..------.x..x.:x:..x..:..:x...::..x..x...xx:x:x::...:x..x.:-----..:..xxx.:xx.....xx..x:.:x...:---:....x....:..:.:.:..::........:.........x:...:.:.x............--..:.::.................:...:.......................x..............x.....-....:xxx....x...........:.........xx......xx.............xx::.::.......:...:.:..x.x...----------.::..xx:x......:...x:..:::.....-x...::..x:...x...x.....x..::.......------:.x.....:.---------......x.------------.....::.:....-------xx..:.:...xx...-...x..xx:x:..:.:.::..x.xx::.x::x:x.:.....x....-..x....x.x.:..:.:.x..xx....---------....----------------....x..:.x.x.:..xx:xx:..x:.:x......:..:.....:.:x..:.xx...x...::x.------.:.:.x::...:xx..:.---..xx...x.x.:...--.xx...:.x::x..xx..x....:x..xx:..:.x.:..:..:.:......x...x.::.:.x:.:x:....::............:x:..x::...x:.-----......--.....-..:x.x..:.......x..------------:....x..:::x..--x...::....:.x...::..x.xx::x:.:.:.:..:x:.x...x.xx..... 16M6D51M5D30M3D62M2D72M1D86M10I31M1D35M6D10M9I8M12D13M7I15M1D46M1I27M9D4M16D65M6D18M3I15M2D100M5I6M2I5M1I19M12D14M2D53M 533/801 66.5% 839/94230402 0.0% 122/801 15.2% 6471714 NA +17076 chr4 + 190214555 24340319 24340318 24341122 804 ACTGACAAAAAAGAACGCACAACTTTGCTACTTAAACGGCTTATTGAAAATTCTGACTGGCTATTTCTCTGTAAGATTTGCAGTGCCTTAGATTTTATACATCCTTTTTGTGGTTAAATTAGTAATAACAGCATTAAAATCTTAAGAACTGTATAGTACTCTATTTAATTATCTTCTCCCATAATTACACTGATTAAACACAGCATAAGAGACCATAAAGATAGATAAAACATTATGGCTACAAAACTTTTTTTTTAATGTCCATAAAATGACTATTAAGCCGTAGGTGACTAAATTAATATCACCCATACAATTTTATGGGGTTTCCGTCCAC----------ATCTAACAGTATCATTTGCCATGATGGCAGATTTTTTTTCATAGCTGTATTGAAACTGGAAACTAACACTTTTCAAAAAGATG---------GGAACGCAGTGGGCTGGCTTGGTCAACTTAGCC-------AAAAAGAAGACAGTTCTGTTTGAACCGTGCTCCAAGCTATGATCTGCTGTATACATTTAAAC-CCGCTGACCACCGAACTCCCTTTCTCATCCACCCGCCACTCCCACTGACAAGCCAATGGGGAACAGTGGTTTAGTAAATTATCCATTTCTTCATTTTCTTCTGAAAGTCATCTCCAGAGATTTTGGGTTATATTGATGGCACAGG---CAATCAAGGAAGCAGATTTTCATTTTCCATCATAGGAATGAGCTTCTGAAACACCCAAGAACTTTCATTCTGTGCAATCCGTGCTATTACAAAGATTAAAGAACATGACAAAAATCT-----CAAGAA--AATAT-AACTCTAAAAGCTAATCCT chr4 - 94230402 17866072 17866071 17866843 76363560 76363559 76364331 772 ACTGACGAAAAGGCAC------CGTTTCCTTTTTAATGGTGTATCAAATATACTGCACCAACGTTTTGCTTTG-----TGTAGACACCATGATTTACTAGGTTGTTTC---AGTTACATTAATAGTGATAGTGTTAAAATCCTAAGAAGTGAGTAGCATTATATTTAATTATC--CTTCTGTAATTACACTGATTAAATACAACATAAGAGACCATAAAGATAGATTAAACATTATGGCTAAAAAAC-TTTTCAAAAATGACCATAAAATGATTATTAAGCCTGAGGTGAGAAAATTAATATCACAAGCATGATTTTATAGGGCTCCCTTACACTGCTTCCCCTACTTACAGTTATCATCTGCAGTGGCAGCAGA-ATTTCCTCTCAGCAGTAATGAAAATGAGAAGTAAC------TATAAAGACGCCGCTATTTGGAACGGA------------GGTCAGTTCAGCCCTCCACACCAAGGGAGAGCGTT-TGTGTGCTTGATGTTTCGGGCAAATGCCAATAAAACACATTAAAACACCCCTGAGCTCTGAGCCCACTGGCTCA---------CACT----------------TGGGTAATATTTGCTTCCCTCGTTTCCTTTTTCTTTATCTTCTTTTACAAATACTCTGCAGGACT------TCACAGCAATGAACCAAGAATCACACAATGTAACAG--TAGCATCTGTTTTCTGAGCAATGGTCTAACGAGAGATCCGAGGATTTTCATACTGGGTGACCAATAGCATTATGAAGATTAAAGAATCCGAAGGAAAATTCCAACCAAGAAGTAATATGAATGCAAAGAGCTAATACT ......:....:.x..------.x..x.:x:..x..:..:x...::..x..x...xx:x:x::...:x..x.:-----..:..xxx.:xx.....xx..x:.:x...:---:....x....:..:.:.:..::........:......x..x:...:.:.x............--..:.::.................:...:.......................x..............x.....-....:xxx....x...........:.........xx......xx.............xx::.::.......:...:.:..x.x...----------.::..xx:x......:...x:..:::.....-x...::..x:...x...x.....x..::..x....------:.x.....:.---------......x.------------.....::.:....-------xx..:.:...xx...-...x..xx:x:..:.:.::..x.xx::.x::x:x.:.....x....-..x....x.x.:..:.:.x..xx....---------....----------------....x..:.x.x.:..xx:xx:..x:.:x......:..:.....:.:x..:.xx...x...::x.------.:.:.x::...:xx..:.---..xx...x.x.:...--.xx...:.x::x..xx..x....:x..xx:..:.x.:..:..:.:......x...x.::.:.x:.:x:....::............:x:..x::...x:.-----......--.....-..:x.x..:.......x.. 16M6D51M5D30M3D62M2D72M1D86M10I31M1D35M6D10M9I8M12D13M7I15M1D46M1I27M9D4M16D65M6D18M3I15M2D100M5I6M2I5M1I19M 494/734 67.3% 772/94230402 0.0% 108/734 14.7% 6474247 NA +3327 chr4 + 190214555 24342348 24342347 24342416 69 ATTATTTTTGTCTCCAATT-ACAAATGAGAAAACTGAGGCTAATAGAGGTTAGGGAATTTGCCCAAGATC chr4 - 94230402 10729193 10729192 10729262 83501141 83501140 83501210 70 ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....:.x.::x.....x..-...::..:............xx...x......:.x..........:::.. 19M1I50M 52/69 75.4% 70/94230402 0.0% 1/69 1.4% 13613155 NA +3318 chr4 + 190214555 24354869 24354868 24354924 56 AGAGCAAGACTGTCAAAAAAAACAAAAACAAACAAACAAAAAACAGAAAAAAAACA chr4 - 94230402 84131220 84131219 84131275 10099128 10099127 10099183 56 AGAGGAAGACTGTTTTTATGATTAAAAACAAACAAACAAAAAACACAAAAAAAACA ....x........:xxx.x:.x:......................x.......... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% -59776351 -34454051 +25164 chr4 + 190214555 24363292 24363291 24364038 747 TCTAACACTC---------ATGTTGGCTCAATATAAACATTTGGTGCCAGCTTGAAGTAATTGTATCACTAATTACTATTGAATTATAGTGGAAATCATATAGAAGTACTTTTAACATTCAGACTAGGACAAGAATGAGTCCATGTGATTAATGTTATTAACGTAACATTCAGCTCGGTAATATACCATAATGATCCGGCTATTATATTAAAGTGTTACTAAATATTCACTTAGTGCCAAAAAACACAGTGGGTGTAAGGTTTCTTTGTCGGATTTGGAATTTAAACA-GCACTCTTTGTCACAGTTAA------GCTTGGTATAAAGCCCTAACAAACAAAATCTGCCTACTACAGGAATGTTTACAAAGGCACAGAAAATG----CCCACAGAAGGAATCAGTTTATCATAAACAATACAAATATTTACTTGATTATTTAATGGGTGCCCAGCATGTCTGTCCTTAATGTAGCATTAGTTGACATCAGGAACACACCATATGTGCAAATAATTAATTCAAATTATGCCTTTCTTCCACTGAGTTCTCTTATAAG-GAGCAGAATTAATGTCGAGGCATATTCAGGAGCAGGGAGT----------------TGTAGGCCCCTCTCCATGACTGCCTTTATGAGTACCTAGTTTTTAATACTTCATCCTCATTGTCATTCCGCTGCCAAGAGCTGATGGCATTTGAAATGCTCCTACCGTGTTCCTTATGTAATCAGTAGGATGACTAAC-ATAGCGATTAAAAACCTGACTAGGCTAAAGATT chr4 - 94230402 17872387 17872386 17873137 76357266 76357265 76358016 751 TCTAACGCTCTTTCCTGTAATAATCACTTCACATACACATTTTGAACCATGTTGAGATAAT-GTGTGTTTCATTACACGTAGATTATAATGGAACTTCAATAGAAGCATTTCT--------------GACACAAATGAATCCCCATGATTAATGCTAATCAAACACTGCATAGAAAAATAAGGCACCATGATGATTTTAGTACTATTCTAAAGCGCCGCCAAACAGACAATTGTTTTGAAAA--------TGGAGTGAGGCCTTGCAGTAGAATTTAGA-TTTAAGCACACACTTTTTAGAACACTTAACATATTGCACTGTATGAATCAC-AGTAAATAA-----GCCCA--ATGGGGATGTTTACTGAGGCACAAAGAACGAAGATCTGCAGCAGAAACTAGTTTATCATGAACGATACAAATATTTACTCTATTATTTAATGTGTGCCCAGCATGTCTATCCTTAATACAGCATTAGCTGACATCAGGCGTATGCCATATGCGCAAATAATTAATTCACATTATG-TTTTCTTCCAGTGTGTTGTCTCAGAAATGAGCTGAACTAATGTAAAGATA-ATTCAACGGCAAATACTGAGATGATGTTTCCCATGTAACAATCTAGCTGTGTCTGTCTTCACAAGTACATGGTTTTTAATACTTCACCCCCGCTGTCATTCCAGTGCCGAGGGCTGATGGGATATGAAATGCTCCTGCAGCGTTCCTCATGTAATCGCTGTGAGGAATAACAATGATTTCTAAAAACTTGACTTGGCTAAAGTTT ......:...---------..:x.x:..:x.:...x......x.x:...xx....::....-..:.xx:.x.....xxx.::......:.....x.:xx.......:.:..:.--------------....x:.....:...x::.........:..x.x.x::.x:::x:..xxx::...x::.....:.....::x:x..:...x:.....:.:::.:...:.xx..x..:x.x:x....--------x..x..:...::.:x:x..x.:....:..-.....:..-:....:...:xx...x....------..x:x....:..x.x.-.::...:..-----...:.--.::..:........x:.......:.:..:.----:.::...x..:..::..........:...:...............:x...........x...............:........::........:..........x::.::.......:................x......-:.........x..x...x...:.x..:-....x...:......x:..::.-.....:x:...::x.x.----------------....:xxx:..xx.::..x...:...:.::.....x.:...............:..:.::.........:x....:..:........x..x............:.x.:......:........:x.:x..x..x....-..:::xx:.......:.....x........x.. 10M9I42M1D51M14D115M8D29M1D8M1I20M6I16M1D9M5D5M2D30M4I141M1D27M1I22M1D17M16I138M1I33M 505/713 70.8% 751/94230402 0.0% 72/713 10.1% 6490905 NA +16051 chr4 + 190214555 24365294 24365293 24365665 372 TTACAGCTGACTCTAAAAAGTTAACATCCAAAATCACAAATTT-----------ATTCTCTGCCCGGTGACATTTTCTTCTTTTCTAATGAATTTGTATTTAAGAGGAAAATTCCAAAATTGAAACAATGGCAATGATTGAGTAATTCATTCCTCAGTGCTATATTAGCAATTAATTAAATCTACCCAGCAATATACAGAAACCAGTCATCTGCCCCTGTATTTATTTTATTTCACTTCATTTCCTGTATCTTGTATATTCCCCAAAGCAATTCTTTGCAGTAATTTTACCTTCCATGCACAAATCTAATAATCCTTC-TTGTTCTTAAGCATCACAGGTGCAGCTGTATTGTTATTAGATTATTAAATGTACATCAGATAAAT chr4 - 94230402 17876290 17876289 17876661 76353742 76353741 76354113 372 TCATAACTTATTATGGGAAATCAGCATTCACAAGCATAAATTTGTTTCTGTATAATTCACTGCCCAGTGACATTTGATTCCTTCCTAACGAATCTGTATTTAAGAGCAAAGTCATAAAATTGAAACAATGGGGATGACGGAGTAATTCATGACTTGGTGCTGTATTAGCAATTAA-TAAATCCACCCTGTAATACCCAGAAACCAGTTATCTGCCATT---TTTTATTTATTTCACTTCATTTTCTGTACCTCGCATATCCTCTGGGGCAAACACAT--AGTGCCTTTACCTTGC-TGCAGAAAACTAATAATTCCTCACTGTACTTCAGTGTTTCA-----AGCATCATCTTCACTGCATTATTAAATGTACGTAAAATAAAT .:.:.:..x.:.x.:::..:.:.:...:..x..x..:......-----------....x......:.........xx...:..:....:....:............x...:.:x:................x:....:x...........xx..::.....:.............-......:....x.:....:x...........:.......x:.---...xx.................:.....:..:.:....:.:.::::....x:x:x.--...:x:........x.-....x...x........:.:..-:...x...x..::.:x..-----...xx:..:x.:.:.:x..............:.x.:...... 43M11I121M1D42M3D56M2D16M1D22M1I18M5D42M 270/360 75.0% 372/94230402 0.0% 24/360 6.7% 6489004 NA +7643 chr4 + 190214555 24368587 24368586 24368931 345 GAACAAGGGCTTTTAAAATGGCAAT----ACATTATTCTATACATTTGTACCATATAATTTATACCACACAAAATATGAAAAAGACCTTTAAGTGGCCTGTTTCCAATGGGCTGTGCAATAAACTGATTAATATTTTAATTAATTTCTTAAGTGCTACACTAAAGGGAGGTAGTTGAAACCTAGCATGCATGAAAGACAGG-ACTTT--CCTCGGAACAAAAACGAAGAGACACATCCATCAGGAGACGCGGAAGAAACGGAGAGTGAACGGG--AGGGAGATGGCAATTTTCTTGTGGCCTG--TTAACTCAGTTTCTTTCAAACCATCTTATTCTCTCCTTTGA-AATGAGCAGA chr4 - 94230402 17878580 17878579 17878916 76351487 76351486 76351823 337 GGAGGAGAACTTCTAA--TGTCAGTGTAAATATGATTCTGTATATCTGTAGCATTGAATTTATAGCACACA---CGTGGAAAATCTTGTAAACTGTCCTTCTTTTGATAGACTGTGCAGTAAACTGTATAGTATTTTAATTAATTTCTTAATTACAAACCCAAAGTGTGGTAGTTGAAATCTCACATGCATGCACAGCAAATACTTTTGCTTTAGCCTAAATAACACAAGGCAGATGAAGGCAGAAATGCTCAAAATAAGCAGAAGCAGCTGGATAGATAGATACCGGCTCTC-----GCCTGCTTTCACTCACTTTC----------TATTTTTTCCTTCTCTGATAATTACCAGA .:.x:..::...:...--..x..:.----.:..x.....:..:..:....x...xx........x......---::..:....xx::x.x..x..x...x:..:::..:.:.......:.......xx..:....................x.:.x.xx.:....x.x...........:..x:........x.x::..::-.....--.:.::.xx:...x.xx.x:..:..x..xx.xxx:..:.:..xx..:.x.x.x...:xx.:.x..--..:x....:x.:::.:..-----.....--..x.....x....----------.x..x..::..:..:...-...x.x.... 16M2D7M4I42M3D127M1I5M2I64M2I18M5D5M2I13M10D18M1I10M 219/325 67.4% 337/94230402 0.0% 32/325 9.8% 6490007 NA +3160 chr4 + 190214555 24387717 24387716 24387801 85 AAGAGTGAGATTCCATCAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237676 9237675 9237760 84992643 84992642 84992727 85 AGGAACAAAAGCTCAGCTGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:..:::.:.x::..x.x:::::..x.x.:x.:......:..:x..x.:...:.....:....:....:..:...:....::... 85M 52/85 61.2% 85/94230402 0.0% 0/85 0.0% 15150041 NA +3339 chr4 + 190214555 24387730 24387729 24387921 192 CATCAAGAA--AGAAAGAAAGAGAGAGAGAG-AGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAA chr4 - 94230402 22272874 22272873 22273068 71957335 71957334 71957529 195 CATCAAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA .........--:.x...:...x.:..:.:..-.xx..xxxx:x....:.:.:..:.:::.::...:.......:xxx.:..x..:xx...:..xx:xx.:::xx...::..:x:.x::.xx:.:.:::..:.:.:..x...x:x......:....:.:.x.....::x..:.xxx:....:x....x.xx..... 9M2I20M1I163M 108/192 56.2% 195/94230402 0.0% 3/192 1.6% 2114856 NA +3648 chr4 + 190214555 24387734 24387733 24387844 111 AAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAGAGAAAGAGAGAAAGAGAG chr4 - 94230402 30533175 30533174 30533286 63697117 63697116 63697228 112 AAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..........::.:.:......:...xx.x..:.:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..-.xx.::..:.....:..x.:.. 89M1I22M 71/111 64.0% 112/94230402 0.0% 1/111 0.9% -6145441 -88084961 +3275 chr4 + 190214555 24387758 24387757 24387842 85 GAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ....:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x..::.:.....:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -12470535 -81759867 +3652 chr4 + 190214555 24387765 24387764 24387963 199 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-------AAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGA chr4 - 94230402 56098324 56098323 56098528 38131875 38131874 38132079 205 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAG-AGGGGGGAAAAAAGTCAAGAGA .....x.::x..x....x..x:....:.:.x.:.::x..x....:.::x:x.-------.x.x.:....:x:.:.x.:.x..:::...:..:xxxx....:xx:.::...:.xx.:.....xx:.:.xxx..:x.::.::..x.:....xx.:....x.:...::...:....:..:..x...-.:.:::....:..:xx...:.. 52M7I124M1D22M 112/198 56.6% 205/94230402 0.0% 8/198 4.0% -31710559 -62519843 +3191 chr4 + 190214555 24387788 24387787 24387883 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:....x:xx..x....xx..x:::.:.x.x......x..x..:..::..x.:::....... 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% -36946913 -57283489 +3459 chr4 + 190214555 24387796 24387795 24387887 92 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGA----GAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:..:x:.:....----..x...:xx..x::..:.x.x.:...:x..x.....:...x..:........ 40M4I52M 64/92 69.6% 96/94230402 0.0% 4/92 4.3% -36946905 -57283497 +3728 chr4 + 190214555 24387799 24387798 24387918 120 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGA----GAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAA-GGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAA-AAAAAGAGAAAACACCGGAAAG-GAGAGGAATAAAG .:.x.:....:..........::.:.:....:.:...----....:..x:.::.xxx:...x.....xx....-:......x...:..-...:.:.....:x.xx:.....-..:..:..x.... 37M4I32M1I14M1D22M1D13M 83/118 70.3% 123/94230402 0.0% 7/118 5.9% -6145365 -88085037 +3200 chr4 + 190214555 24387800 24387799 24387898 99 GAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAA chr4 - 94230402 61334701 61334700 61334799 32895604 32895603 32895702 99 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA ......:.....x......x.:x.....:.::x:::..:.x:xx..x....xx..x::..:.x.x.:..:.x..x..::...:.x..:........::. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% -36946901 -57283501 +3228 chr4 + 190214555 24387817 24387816 24387900 84 AAAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAG chr4 - 94230402 27835415 27835414 27835498 66394905 66394904 66394988 84 AAAGATTGAGAGAAAATGAGGAAGGGAGAAAAACTGAGATAGGAGGATGAAGGAAGGTAGAAATTGAAAGAGACTAAATGAAAG .....xx........:x...:...:....:.:.xx....x.::::..x:.......:x...:.xx......:.xx..:x:.... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -3447598 -90782804 +3811 chr4 + 190214555 24387823 24387822 24388030 208 AGAGAGAAAGAGAGAAAGAGAGAGAGAAAG----AGAGAAAGAGAGAAAGGAAGA-AAGAGAAAGAAAG---AAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAGGGAGA--AAGGGAGGGAGGGAGAGAGGGAGGGATGAAGGAAGGAAGGAAAG-------AAAGAAAGAAAGAAA chr4 - 94230402 72111981 72111980 72112205 22118198 22118197 22118422 225 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGTGAGTCCAGGAAGGGAATGGAAGTACTGCCAAACAAAGAGTGAGa .....::...:.....x:.:.:......:.----.:.x..x:.x.x.x:.x....-....::....:x.---...x...:.:x::....x:..:...:.:..:.xxx........::.....:x.xx...:.x:x:....::..x:xx.x.:::.:.--.x:.x..x:x....:...:x.x.:.x:x.:.:.:....x.:...-------...x.....:x..:. 30M4I21M1I13M3I85M2I44M7I15M 127/208 61.1% 225/94230402 0.0% 17/208 8.2% -47724158 -46506244 +3440 chr4 + 190214555 24387824 24387823 24388013 190 GAGAGAAAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGA-----AAGAAAGAAAGAAAGAAAGGGAGAGGGA------GAAAGGGAGGGAGGGAGAG---------AGGGAGGGATGAAGGAAGGAAGGAA chr4 - 94230402 4547804 4547803 4548013 89682390 89682389 89682599 210 GGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA .:...x.::.:x.xx...x.x...:..x......x...:x:..::...:x.:.:xxxx...:..........::..:::.xxx:..::x.....x...::...xx...:...x..:..-----..:.x...:.x...xx..x:..:xx:::------.....:.....x.::x:..---------.::...::.x:..:.x..x....:. 118M5I28M6I19M9I25M 113/190 59.5% 210/94230402 0.0% 20/190 10.5% 19840020 NA +3216 chr4 + 190214555 24387855 24387854 24387911 57 AGAAAGAGAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGA chr4 - 94230402 9237704 9237703 9237760 84992643 84992642 84992699 57 AGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x::..........x..x::...:.....:....:....:....:...:..::... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 15150151 NA +3027 chr4 + 190214555 24387862 24387861 24387915 54 GAGAAAGGAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAAGAAAGA chr4 - 94230402 27809323 27809322 27809376 66421027 66421026 66421080 54 GAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAA ........:::.:.x:....x...::......x......:..:....:....:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -3421461 -90808941 +3606 chr4 + 190214555 24387901 24387900 24388023 123 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAGGGAGAAAGGGAGGGAGGGAGAGAGGGAGGGATGAAGGAAGGAAGGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.::...:.:...xx.x:.:....x..:::xxx...:x.:..:xx....x:..:.:.x.::..:.:::..:..x:.x:xx:.:.....:..:..x.... 123M 72/123 58.5% 123/94230402 0.0% 0/123 0.0% -6145263 -88085139 +3008 chr4 + 190214555 24387904 24387903 24387965 62 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGA chr4 - 94230402 9237699 9237698 9237760 84992643 84992642 84992704 62 GATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x.x..x::..:......:x..x::..:::....:....:....:..:...:......... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 15150205 NA +43454 chr4 + 190214555 24391495 24391494 24393243 1749 TATATGTAGTGGATATGCTGATTTTAAAAAAGAAAGAAAGAACTACAATAATGGTGGTGTGGTCCCTTGAGAATACATTTGTTTCTGCAGTATAAAACAAAATTAAATTCTTCAATCTCAAAAACTATTAAAAGGTTGTATTTAAAATGCATGAAGCATTAAAAAGACATCAAAATTAAAATAATCTCATAAATCTCTTCATTTAAAAGACTTATTAGAATACAGATCGAGGCAGAAAACAGCTGCCCAGCCCTCCAGAGCAGTAAATTATAACTATTTTAAC-TTTTTTCATTTTCATCATTGAAAATTCTTTTCCAGAATAATTGTATTGCTGTAGCAAGACCAACTGTCCCACATATTTAACATGTGAGTAGTAAATTG-CTTTCAATGAACTCCGAAACAGATACGCTGTATATTCTTTTAAAGATCAGCCAACCACAGGGTTATGCCCTGACAAAGGATACAGAAGGTACAAGCAGAAATTAGTTTTTAATGTAAAATTGATCAAAATAATTAATTATTTCAATTCACTTTGCCAGAGCACCAGGGGAGCCTTAGGAGAAA--------CCTGATAGTTTTCCTATA-----GAAAACCTGATAGTAAGA-ATTTTATTGTCA-TTCGCTTTTTTCCTGGATCTGCCAGCTAAAACCCAATGAAAAAAATTATCATGGGAAGGACAGTTACAT----------------------GTGTCCAATTGCCGTC-------AGTC----ATTAAAACTTGAATGTCTTTTGTAAATGACTGACAAC----------------------------TAGGTGGAGGCTTTTTTTAAAAAAAAT----------------AAAGATTCTCACTTCATAGACCACCATGTGTCAGTCTTG------------------------ATTGTACTGGAGCATTCCTTGGAGTACAATTAAACTATCATGTTGATTGCACCTCAGTGCAGTAGAATCCTGAAAAGAGGAAAAGAAAAGCCAGATGGCTAACCATGATGCCTCATGCCTGTTGCCCCTCCTCATATTCTTGAAAAATATAC------TGTGAAATGAGCAGAGCTA---TTTTTTATAGAAAGCAGCCAGATATGCTTTGAAAGTCTCATCAGGCGATAAAAGGTATGTTCCCATAAAGCTGCCTCCCATTTTT----------------------------------ATCACCTTCCCT--------TCTGTA----GGCGCACTCTGACATCATTCCTCCTTAACAGAGATAAGATTAGTAAACAGTGGGCTTTATTAGGAGCTACTTAGAACATCATTAATCCAATTTAATTGATGGTGTAGTGGTACCAGATCTTTTTGTCCTTTCTCTTTCTGGAAGACAACATGGGTAGCAGAATCAGACTTCTTTCCAGAAACA-------------------------GCATCTATCTTTGGAATTCTGCACACTTTCCCGTTGCCTCAGCGC--GCACAGGCTGAGCAAAGCTCCTTATCTAAGACTCTGAAAAGGATAACAGGACTGCTCGAGTATAAAAACTGCAAGTATTTTATTTATCTCTCTTTCTTTCTGCTTAGATTACCATTATCTTTGGTCACTGAATTTTGTCTCTTAGGCTTCAAATGAAGAGCGAAGTCAACCAGATGGTACAGCTCTAAACCCCATGGATTACTGCTCCATCAGCACACACACACACACACACACACACACACACACACCCCTTTTTCTGGCCTTTCTTTGGCTTTACCTTACCTTAGGGTTAACTTGCTCATGAATGGTTTCTGATGATTCTACAAACTTCCTGGCAAAATATTTATGCTGAAGAACAATGCAGGTGCTACAAAGGCCTCAGTAACTACTACTTATGCTG--CAGCTGAAATGGGAGT---------CAAGCAAATGAGCTGTTGAAAACCAAG chr4 - 94230402 17881108 17881107 17882957 76347446 76347445 76349295 1850 TGTATATGCCAGATACGTTGAATTAAAAGAAAAAAAAAAAAA--GCTGTAATAATGGTGCAGTCTCCTGAGAATACATTTATTTCTGCAGTATAAAATAAAATTAAATTCCTCAATCTCAAAAACTATTAAAAGGTTGTATTTAAAATGCATGAAGCATTAAAAAGACATCAAAATTAAAATAATCTCATAAATCTCTTCATTTAAAAGACTTATTAGAATACAGATAGAGGCAGAAAACAGCTGCCCTGCAGACTAAAGCAGTAAATTATGACTATTTTAACTTTTTTTCATTTTCATCATTGAAATTTTCCTCACAGAATTATTGCAGCAATATAAAAAGACCAACTGCCCC-TATATTTAACACGTGAATAGTAAATTATTTTTCAGTGGACTTCACAACAGATAAGCTGTATATTCTTTCAAATGTCAGCAGACTATGGGATCGTTTCCAGACAAAGGAGGTGGGGAGTGTTTTCAGAAATCAGTATTGCATGCAAAACT-ACAGAATTAATCAGTAATTC--ATTCTCTTCAACACAACAGCAGTGGGACGCT-GCAGCAATTGTGGCTCCAAACGCCTCCCTCACACTCTTGGCTATCACAAAGTGAGGTATTTCAGTATTAGTGTGCT---------GACTTGC-----AAAGTGCTGGGCATGAAACAGCTCTAGGAAGTTCATTCATTTACGGATCCTAACATGGTCTTCAGTACCCAAATCTAGTCAAGATTTAGTCTACACTTAAAAGCAAAGAGCATTGCTCATATTGCTGACACTATAAGCACGTTACACAAAGATGCAAATGTAAAAGGAGGA-------AAAAAAAATCAGCCACGTAGGACAGGAAAATACATGCTTGTTTCATTACCAGTTGGTAATATTGGCCTTTTTTAAAATGACATAAGTAATTTTTTCAGACCATTTTTTCA---GCCACTCATCCCTCACCTCATCTGTGCTCCAGT--AGTGAGATCTTTC------------CATAGTCAGGCTGTTGAC-------ATCCAAGCAGATTACAGCAGGAAATGCT----AAAGATGCACAAAACTAGGGAAATGAACAACACCAAAGCTAGCAAGGGGAAGGGGAGGGGAA-------GAAGTTAAATCAAG-AAGATAAAGACTGCTCCCACGTAGCCATTTGCTGGTTTTGCTTCACTGCAAATTATATAATATGATATTATAAACCACTTTTCCTGACAGCAATGTGCATTACTGTGCACTTTAACTTCCTTCCTGCTTACAAGAGATAAGATTAGTAAAT-GTTTGCTTTATTAACAACAAGTTGAAATTCTATTAAACCAACTTAATTGATGGTACAGTTGCATGGACTCTGCTTCTTGTTTATATTTTCCAAACCTTGCACCTGCAACAAAAGTTGACTCCTTTCCAAAAAAGAAAAACCAAAACCAAAAAACAACACACATCCACTGTTCTAATTCCATATACTTTCTCCCAACATCGACACCTGTTTAAATTGCGCAAAGCTCCTTATCAAAAACTCCAACAAGGATAATGGAAGTGCTCAAGCATAAAAACCCCACTTATTTTATTCA----TCTTTGCCACTGTTAAGATTACCATTATGTTTGGTCACTGAACTTTGTCATATGGGTTTCAGATAAAGCAAGTAGTCAACCAGAAGACACTGCTCTAAACCCAATGGGTTAGTGGATCATCAATAAAAAAACAC------------------------------TTCTGTCCTTC------TTTCACTTTAGCCTTAGGTGAGCTTCCTCATGAGTGGCTCTGGATGATTCTGTAACATCCCCTGCAAAATGCTTATGC---AGAACATTGTGCGTTGTACAGCTGCTTCGGTAA--ACTGCTGATAATAGCAAGCTTAAATGTGAACTGCTAAGAACACACCAACTCTCTGCTGAAAACCCAG .:...:.:x::....:.:...x..x...:..:...:...:..--:.x:....::.....::...:.:.............:................:............:....................................................................................................................x....................x..xxx.:.:.............:...........-.......................x..:::.:x......x....:.x::x.:..:x...........:...-:..........:....:.........:-:.....:..:...:.:x........x..............:...x:.....x:..:.::..:.::.x:..x.........x:::.:::..::xxx.......:...x..xx...:....:.-.:x:..x....:.:.x...:--....x...::x..x.:..x...x..::.x:.-.x..x..--------..x:.::x:.::.::.:.-----.:xx.:.xx.x...:..:-....:.x.:.:.-.x:...---------..::...-----...::x.x:x.x.x:...:x:::x.:.....xx..x.:.:x.----------------------..::....x.x:x...-------....----x......x:x:.:x.:x..x:x:.x..x:......x:----------------------------..::x.....x-------.........----------------:..:..x.x::...xx.xx.::....xx..x:.:.x...------------------------...x.x:::..x....::..x:---:.x.:.x.x.:x...:x.::x:..::.::....--...:::...:.xx------------x.x..:...::x.:.:..-------x::..x..xx:..:.xx.xxxxx..::.----...:..::..------x.x.......:..:x:.:.---:.xx:x.x:.:...x:.xx:.:x.-------:....:xx....:.-:.x.x..:.xx..:.....::x...::::.x.::x....----------------------------------.:...:..:...--------.x..:.----x.:.....:.:..x..x.....x....xx..................:-..xx.........:x.:.x.x..::..:x::.....x....:............::...x.:.:x::x...x:..x.:x...x.x...::x:..xx:x:..:xx.:.:..:..x:x....:.......:...x:-------------------------:....:.::x..xx.....:::.:......:.x:x:.x..::.:.--.:x:.:::..x...............x..:....::.x........::.:.x.....:..:........:x..xx.........:.----.....x::x...:.x.............x.............:......x:x.:..:....:..:...x:x.x...........x.::..x...........x....:...x..xx:.....::.x.x.x....------------------------------.....x....:------:..:..:...x.:.x:...x.:...x.......:...:.::x.........::..xx.:..:x.......::......---......x..::x..xx....:xx..:..:....--...:..x..:x.:--x....x.....x..::---------..x:.x..:xxx...:........x.. 42M2D239M1I70M1D27M1I121M1D20M2D31M1D7M8I18M5I18M1I12M1I6M9D7M5D42M22I16M7I4M4I37M28I11M7D9M16I39M24I22M3D33M2D13M12D18M7D28M4D10M6I19M3I24M7D14M1D39M34I12M8I6M4I48M1D134M25I45M2I86M4D134M30D11M6D78M3D33M2D13M2I16M9I27M 1121/1639 68.4% 1850/94230402 0.0% 321/1639 19.6% 6510387 NA +25684 chr4 + 190214555 24405312 24405311 24407394 2083 TTTCCCCTCCCCCCAAAAAGTTTTTCCAACAAAAGTAATTGACAGTATCTGTTTAGTAACTT------GAGAGAGAGAAGAGCGAGA----GCTTTTATGCAAATTTGATTTCCCTATAATAATCTAGAGCTATTCTGCTAGAAGGAATTATCTCCGCAGGCTGGCAGCTGTGGTAGGCAGTGAATTAAAAATGGCTCTGTATATGGGAAAATCTGTTCTATAATCAGTGCTATTCTTGGAGAGGACATCAATCTAGCGCAGCTCCCATGGTGCTCCACGCCTGTGAATGACATACAAGCATGAGGTAGAAACTCCCATTACATCACGGCTGGGGATTCTGTCCTGCCTGAGA---------CATTGAACTGCTATCCCAAGGTGAGAATGGATCCAATGGTAGCCTCCAACCAGCCAGTATGGCCAATCCCCTTAAG-----TTAGGAAAGAACACATTAGAGGACAAAAAAAAATCTTCCAACAATGATTTATTCAACTCAACTCGAACTGCCCAGTCTTAGGGTTATTATAAGGCTTCTACATGTTTTCTTCACTCTCCCCTTTCTTTTTTCTTCCTTCTTCCATTTCTGTCTTCCTCCTTTCCTTTCTTCTTTCCCTCCTTCCTTCCCTCCTTCTTGCCTTCTTTTCTTCCTCCCCACTCTCACTTCTCTCTTTCCCTTCCTTCATTTCTTCGTTTTCCTCCCTGCTATTCTGATACAGAATCTAAGGTTCGATTCCTAAATCACAAGATGCCAGGCAAAGAAATGCTACACAAGGGCTCTTTGTCCATGGGAAAGGCACACGCTACAGAAAAGTATTTTAAGAAGCCAGCAATGACTGCAGTGCTGCACGTAAAATGTCATCATGTTCTTAATGAGGCAATTGCTTGGTCAGTAA---AAATACTCTCGCCCTGGGTGGTTAGTATGTTGAAGTTAACTTGGACACTGCATGTGGCAGCCACAGCCATCTTC---CCACAAGAAGTTAGGCTGCATGTAAATAAAGCCATCACCTAC----CCCCAAGTGAATCCTATCTCCTTCATTGGACATGGAATTTTCCTGGGAACCTGTGTCCCTGTGCTTCTGGCGAGGTGT----CTTCTTTCCTTAAGTCGAGTGCACCAT-TATTGTGTCTGTTTGGAGTACTGGATAT-CAAATTAAACTGTGTGAG--------TGTGTCTGCATATC------TCTGTCTGTGTAAAGGGATTTGGAATTATGCTGAT-------TTAAGTCACTCAGTGTCTTTTAA---AATAACTAAACGTCAATGC---------------------------TAGAAATGCCAAGAAATTGCACTTCGGAATTGGAACTAGTCATCTCTCCCTTTCAAACATTGTTAAGAAATGGCCTTTGTCCAACATGCCACGTCCTAGAGACCCACAGAGCTGAGCAT-----ACACATGCCCACAGTGGAAGGTCAAGGTCTCCAAA--------------ATGTTGAGTCTTCTACTGAGGTTAGAGCTAGCAGCTCCAGCAGTGTGGGCATATCTGCATGAAAAGGCAGAGAACAACCTAATGAGATTGACAAGCAGT-GAATCTGTTTGAGACCACATTGAGCCTGGCCATCCAGCACCAAGAT-GGCTTGAAATAGCTCTCAGAGAGGCCAGAAATGCTGTCTTTCAAACATGTTCCCTGGAGAAAGGGAATTGTTCCTGCTACCAGGGCCCCTCAG---GGATCAGTATCCTCTTGCTGCTCATTCTCAGGCAGGAACCTTTCTCTGTGCTCTTCTTGGGTTCTGTTCTTTTGAGCCTTTTCTTTTTCAGCTATGGTGGCCATAGATACATACCAGGCACCAC-------CAGACATGCATGTATTTCTTGAACCACCTCCACTCTCTCTGAAGCTCCG---------GAGGCCTCCAAAGTCTTCACGAAAGGCACAAAAGCTGCCTACATTATCACTTTGGTAGGAAAGCAAAACAGGGTGGCACTGCAGGGTTAATTTAAAAGACAGCTGCATCCATTTTGCTCATTACTCTTCATGTATAAACTGCAAATTGCATTTGAAAATATTTTCTTTAAAATAAAATTGTCATTTCTGAGCCTCCTGCAGGCACCCAGTGTCTGGGTAAAACAAGTAGCACTAACATGAAAC-GAGGGCGTCATCCCTGCCTCCTTTACAGAGGTAGCAGGCCA chr4 - 94230402 17887331 17887330 17889123 76341280 76341279 76343072 1793 TTCTCCCTACACACAAAAA---------AAAAAAGTAACTGACAGCGAATGTTTGGTAACTTTGACATGAAAAAAAGGGGAGAGATAAAATGCTTTTATGCAAATTTGATTTCCCTATAATAATCTAGAGCTATTCTGCTCGAAGGAATTATCTCTGCAGGCTGGCAGCTGCAGTAGGCAGTGAATTAAAAATGGCTCTGTACATGGGAAAATCTGTTCTATAATCAGTGCTATTCTTAGAGAGGACATCAATCTCAC-CAGCTCTCATGACGCTCTCTTCGTGCAAATGACATACCAGTATGATGTAGAAACTCCCATTACATCACTGACACTGATT---TCCTGAGTGCAAGGAACATACCATTAACATGC-------AGGGAAAACTGTGAGGAATG----------ACTGTTCACTTCTGCATATTCTCTCAAGAATCTATAGCAATGAATGACCTTCAGAAAAAAAGA------------AACAATTCATCCAACTGGACTC--ACTGCAAGGTTTTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTCCTTGTTGTTTT--TGCACAAT---AGGTTCCGTTCCCAGGTCACAAGACATCAAGAAAGGATGTCTAACATGATTCTTCTTTGAACATTAAAAAGGCACATACTACAGGAAAGTATTTTACGACGTAAGCAACCACTGCAGCTCTGCACATAAAATGTCACAGGACTTCTAATGGTGCAGCTGCGTAACAAAGAAAATAAACACTATTATAACGCATAGATTATACTGCGGACTTAACTTGTGTGTTTAACATAGGACTCGGTCTCATTGTCATACCGAAGCAAATTATGTTGTAAATAAAT------ATTACCTCCTGTACACAAAGTGACGTCTGACTC------------TGGTACTTCCTCAATAATCTTTGTCCTCATGCTTCACACGTACAGTAATCCTTCTTCTCCTATGCCACATGCACTGTAAACCGTCTCGGCTT-GAGTGATGGATTTGAAAATTAAACAACCTAGGGGGCTCACTGtttttaaaaatcattttatatatcattttaaaataaCTTTAGGTAAC-CTGACACGAATGCTAAGCCACTGA---TCTATTAATTCAAGATGTACTCTCCTATGCTACAGTTTGCCCTGAAAAGCTGACTTGTAGAAATGT--ACAAACTGCACTGAAAAAGCTAAA---------------TACAAAATAAATTGAAAAAATTGCCATGACCTCTC---CCATTCTTTGGAGTTCTTCAGATATGATTATCTTTGGCACTTGC-----ATGAGACATAACAGTTTCCAAAAAAAAAAAAAAAACATGTT---TTTTCTTTAAAAGATGAAATT----------TCACTGAAGAC---------TGAAATAGGATAGCACACCTTAACCAG-------AGCAGTAGGATTTGGTATTTCCCACA----------------AGCACTAAAACAGGCTTAAAA--------AAAAA----AAAAATCCCATC-------CCTACTCCCTAGC-----AGAGTTG-TCCTCTTAC-----ATCATCAGACTGTGTTTGCATCACTTCACTGCT-------------GAAC---------TGATGCCCTGGAGT--TATTCCATTG------CTTTCTTTCAGCAGT--TTATCATTATGACAGCCTGGGCTCTCTGCTGATACAGGCACACGTGT-----------CTCCACCACTGCCTCTCAGGTGCCAAGAAGAGTTGGGATTTCC----TGTTCTGCAGAGAT---AATGTTGAATGCATTA-AATTTCTCTGGGAACTCCAAGCCTGGTGACTCTATGGGGTTAATCTACAAGACAGCTGCATCCATTTTGCTCATTTCTCTCCGTGGATAAACTGCAAATTGCATTGGAAAATA------------------AGTTATTTCTAACCTTTCAGCTGGCAGCCAATATCTTGGTAAAAAAGGACGTAAT-TTATGACACTGATGATGT-----GTGGCTGCTTTCCAGAGACTGTAAACCA ..::....x.x.x......---------.x........:......::xx.....:.......------..:.:.:..::...x..x.----.................................................x..............:...............::.............................:...................................:................x:.-......:....::....:x:x.x..::..........x..:....x......................x.x::xx....---.....xx..x:.---------....:.xx...-------...x:.:.x..x:xxx....----------..::x:..x.x:x..xx..:.:..:...-----x...x..x...::xx:.xx..:.x....:.------------..::...:..:.....x:....--.....xx:..:..:.-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..:....:..:.:..:.--.:..x...---......x:....:.::........:::..:.x..:..x:.x:x...::.xxx:......xx...x::.........::......:...........x..x.:x.....:x.......:x......:..........:x:x::.::.....:x...::...x.:::x.:x..---...:...x.:::xx:.x:.:.x.x:..:xx:.:.x........x::::.xx.::.:.x.x:.:xxx:...:x..---..:x.:x..:...x.:..:.x:.....------..:....x.----.x.x......xx:..:x...------------...x.:..:.::::x..:..x.....:::......xx:..x:xx..----......::.:..x.:.:x:.....::.-x.::..x..x.:..-....:x.....x.-x.........x::x.::.--------...x.:.:x.x...------.x.:..xx.x....:x:.:..x:::.x.:-....:-------:....:....x.---...x....---..x.xx..xx.x:.x....---------------------------........:--.x...:......xx::..x:x:..---------------.x:x...:.xxx.x..:....x...x.x::.:xx.---...:x:::.:...x:.:x....xx...x:..-----:...x...-----:..::.x:.x.x:..:......--------------.....---.:....x:x:.:.x.::.::.----------x..x..x:.:.---------.....x:.x.x..x...x.:...:x..-------......-.:..:..x.xxxxx.....----------------.....:..:.:-.....:...--------.:.:.----.:....x.::..-------.x.::.....:.x-----:..:...-....x:...-----x:.x....---.x:.:x.:...x::.::.....-------------....---------..x.x::..x.:..--.:...:x...------:.:.:.......x:.--.x::...x:xx...xx.::...x.:x:-------...:..::.:...-----------.x..x.....x:....x.:.:x..:---------.:.:::...----.x...xxx.:..::---..x.:..xx.:.....-x.:..:xx.:....xx.x..:.xx....:.x..:::........:..x...........................x....:.:..x...................x.......------------------x..:......:.x.:.:.x..x....x...:.:...x.......x.:.xx.:.x.-x:....x..-..x.::..-----x..x..x....x.....::x.:.::... 19M9D34M6I19M4I167M1D79M3D12M9I11M7D20M10D28M5I30M12D22M2D15M175D17M2D8M3D171M3I74M3I27M6D9M4I20M12D46M4I27M1I14M1D13M1I18M8I14M6I29M1D5M7I12M3D8M3I19M27I9M2D24M15D35M3D31M5I8M5D22M14I5M3D21M10D11M9D27M7D6M1I19M16D11M1I9M8D5M4D12M7D13M5D7M1D9M5D8M3I22M13D4M9D14M2D10M6D15M2D27M7I13M11D25M9I9M4D14M3D16M1D113M18D55M1D9M1I8M5D28M 1125/1661 67.7% 1793/94230402 0.0% 554/1661 33.4% 6517981 NA +3207 chr4 + 190214555 24410271 24410270 24410368 98 AACAATAGAATATTATA-----TATACACATACACATATGTGTATGGATACACATACACGTATTTTCCTACATATACAAATATATATAACAAAT------GGAAAAATA chr4 - 94230402 48167018 48167017 48167126 46063277 46063276 46063385 109 AGCAAGATAGTATTGCACCTTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATGGTAAATGTGCCAGGAAAAATA .:...x.x.:....::.-----....:.:xxx..:......:...:..:.:....:x..:.:.x:..x....:..::.x.:..:...:::....------......... 17M5I72M6I9M 66/98 67.3% 109/94230402 0.0% 11/98 11.2% -23756747 -70473655 +7011 chr4 + 190214555 24420214 24420213 24420490 277 TAAACCCAAATTATTCTGGTTAATAGCCTGGTAAATCTCAGAACAGAAAGTGTGCACCGCTGCTAAGTATTCCATATTAAAAATAGTTTGTGATGGGATGTGC--TTTTTTTAATTTAAAGTTTAATGTACATTAACATTTTTAGATGAAAAACTGACAATCTGAGAACAGTTCTAAATTCTCCTTTGATTATTTTT----CCGGCGCGTTGAAGGCATGATATAGCTACATAAATAGG-CTAACAC--TCTGGTTCTTTGGAAGATTAGTGTCTGTCCGATCGTA chr4 - 94230402 17898222 17898221 17898494 76331909 76331908 76332181 273 TAAAATCAAATCTTTCTATTAAGCAACAT-----ACTTTTGAATAGGA--TCTGTACCA----TAATTACTCTTTATTTAAAA-AGGCTAAGATATAATACACAGCCCTTTTAATT-AAAGTTTAACGTACATTAACATTTGTAGATGAAAAACTGCCATTTTCAGAATGGTTTTAAATCCTATTTTGATTTTTTTTTTCCCCAAAGAACTGAAGCGATCACGTAACTGAATTAAGAGGACTAACAATGTCAGATTGTTTGGTAGCTAATTCTGTGTCCTACTGCA ....x:.....:x....:x.x.::.:.x.-----.::.:x...:..:.--.x..:...:----...x..:..:x....x....-..x:.:x...:x:..:::.--:::........-.........:..............x..............x..x.:.x....::...:.....:..x:.......x.....----..::x.x::.....xx..x.::..:..:x..x..x...-......x--..x.:..x.....x..x.x.x.x.x.....x.::.:. 29M5D14M2D9M4D20M1D19M2I11M1D80M4I38M1I7M2I37M 183/264 69.3% 273/94230402 0.0% 22/264 8.3% 6521992 NA +6519 chr4 + 190214555 24420214 24420213 24420490 277 TAAACCCAAATTATTCTGGTTAATAGCCTGGTAAATCTCAGAACAGAAAGTGTGCACCGCTGCTAAGTATTCCATATTAAAAATAGTTTGTGATGGGATGTGC--TTTTTTTAATTTAAAGTTTAATGTACATTAACATTTTTAGATGAAAAACTGACAATCTGAGAACAGTTCTAAATTCTCCTTTGATTATTTTT---CCGGCGCGTTGAAGGCATGATATAGCTACATAAATAGG-CTAACAC--TCTGGTTCTTTGGAAGATTAGTGTCTGTCCGATCGTA chr4 - 94230402 17892304 17892303 17892575 76337828 76337827 76338099 272 TAAAATCAAATCTTTCTATTGAACAACAT-----ACTTTTGAATACGA--TCTGTACCA----TAATTTCTCTTTATTTAAAA-AGGCTAAGATATAATACACAGCCCTTTTAATT-AAAGTTTAACGTACATTAACATTTGTAGATGAAAAACTGCCATTTTCAGAATGGTTTTAAATCCTATTTTGATTTTTTTTTCCCCAAAGAACTGAAGCGATCACGTAACTGAATTAAGAGGACTAACAATGTCAGATTGTTTGTTAGCTAATTCTGTGTCCTACTGCA ....x:.....:x....:x.x..:.:.x.-----.::.:x...:.x:.--.x..:...:----...x.x:..:x....x....-..x:.:x...:x:..:::.--:::........-.........:..............x..............x..x.:.x....::...:.....:..x:.......x.....---..::x.x::.....xx..x.::..:..:x..x..x...-......x--..x.:..x....xx..x.x.x.x.x.....x.::.:. 29M5D14M2D9M4D20M1D19M2I11M1D80M3I38M1I7M2I37M 181/264 68.6% 272/94230402 0.0% 21/264 8.0% 6527910 NA +41621 chr4 + 190214555 24424658 24424657 24426834 2177 TCCAGTATCCATCCCAGTTAGAATG---CCATAGTCCCAAGCGAGA---TGCACTATAAAAAGCATAATTTGAGCATCATCTCTCATCATTCAATATAGTTTTTCAACCCTTTCAAAATTACATTGAAAAATCTATATAATGTGTGCTTAGATTAATGAACTGTTTGAATCTGGATCAATAAGCACTCGAGGCTCTGTGCCGTTGACACCTGCTGGGAACATCTAGAAGAATGCTTCGTAGAGGGCAGAGCCAGTCGGCACTTTGAAACTACAGGGGTTCCACTTAATAAACAAGCAATCTAATATATGACCTCTGCAGATTAATTTTCTGAGAGCAAGCAAATAATCTGGATTCAAATTTTCCCTGATTATGCATATAATTACAGTATCACTTACCAATTAACACATTGATTTAAACCTTCTTGGGATTATGTATTTCAGAGTATAAA----------AGAGATCATCCAAACGCTCAATGCCTCTCCAGTTTGGCAAAGAATCACATGGAATGCAACTTCCCACCCATCTGATTTCTCTTATGGAAGAAAAAAATCTGTGATGGTAAC----AGATTACAGAGGATACCTTAAAATATCACG-GGCCATAATTATTGTCTCAATAACTGGACCACAAGGACACACATTATAACATAATAGC------CAAGTCTTGGGG--AAACTTTGTCATCTCCTGAAATATTTCTGTAGAATCATA--------TATTT-ATAAAACT--GCTTCTCTAGCTTGGATTATTA--------TTATTTTTTAATTTACTGC------AGCACCCAGGGTATAATTTATCCACCA----TTAGACAGTTACATAAATAGACAA--AGATATATGGTGGAGATTCTTCTCT---ACTTTAGACAAGTATAATAATTAATG-----TTA-GTCGTTTCTTATTCCTACATAAAATTTCCCATTAAAAATGTTAATATGCTCCTTCATAAGTCCAGATAGTGATGAAAACAGAAGATACAAGGAAAATAGCTACATAGCATGCATACA-----TATG----TAAAAGA-------------AGT--------------------TAAAAGTAATAAAT-----------------------------CAACATGGCC------------------AATATAAC--------GAAGCCTG------------CTGTCCAAC-------------------------------------------------------AGTAAAAG---------------------------------CTGTCAGAATGAGGTTTCATTATTAAGACCTTGATATCCAACCGTTGGGCTGAATAAAATCATTCATATCACTTCTGCACTTTC----AGGGAGAGAATTCACATCTAGGATCAAATTGTCATGGTGCCGAATTCCTGATTTTTTCCCCTTGTGTTACTTTCTGAATAATTATTT-GAATCTCCACAGGAAATGAAAGTTGACTAAAGCTAACAACGAAATAACAAGCTTTTACACACAAAGAAATTACTCTATGGTGTTTTATTTAACAATAAATATTTCAAAAAGGAATGCTTACACATTTGAAAAAATAAAGATCTGACTAATTCAAATTCCAGCCCTACTGTTTTCTCAGTAAGA----TAAGTAACACAAGCAATCATAAATATGGTTTAAAATTACAACGGGGAGGGAACACTTGCAATCAGTTAAGTTTAGACCTTGTCCTTATTTCTTCTTACAGAAGAAGGTAGAGAGGTAAAGCCCTCTAATATAATACTTCGTA-ATTCCAGAACATATACTATTGATATTGTGATTCTTTCTGAGACATAATAACTAATTATTCAGAAAGTGTCAGAAAATAA---ATCCAACTCCTCCTCTAACCTTAGTCCCTAATTTAAAGGGGAAGAAAAACAGGGCTTCTAAGGATGAAAAGTCCCAAGTGCCATTTAAAAATAAAAGGAACATTTCAAATAAACTTCAATCTCCTTGACAGCATACGAACAAAAACAGCAGC-GATATACCAGCTTCTTCCCAAAACA--------------AAACCCAGTGAAATTACTGAGAATT-TCAGCTACTGTAATCCAACTATGTGAAACTCTGGGGG----TGTCAGCAGCTACTCAATAAAAAGGAAAAGTGAAAATAGTACAAAAATGGTTCCTAATAGCAATAATGTATAGTTTTGT-GGTCATTACTGGTCAGATAATAACCGGCAGTGACCTTAAAACCATGCATTATGGCTTAAGTATGGGCTAGTGCTCATTGCAGATGTGTAGCTTAGAAATAAGCAATACAATCTTGCCATAAAAGCTCAAACTGTTCCAAGTCTGGCTTGCGTGCATGGATTTTTCCCTCTCTAGTGTTA-----TCACACCAGGAATCTTATAATGATCTGAAAAATATGTACCTTAGGGCAATAGTTCTATACTGAAA chr4 - 94230402 17899826 17899825 17902081 76328322 76328321 76330577 2256 TTTAGCACCCAACCCCATCTGAGTAGGTTCACAAACCCCAGCAAGAAGATGCGCCATAAAAA-TATAATTTGAGTATCATCTCTCATCATTCAATACAATTTTCCAGCTCTTTCAAAATTACATTGAAAAATCTATATAATGTGTGCTTAGATTAATGAACTGTTTGAATCTGGATCAATACGCACTCAAAGATTTGAACTGTTGACACCTGCTGGATACAGCTATAAGAATGCTTCATTCAGCTTATAGCCAATCAGTACTTTGTAACTACAGGGGTTCCACTTAATAAACAAGCAATCTAATATATGACCTCTGCAGATTAATTTCTCGAGAGCAAGTAAATAATCTGGATTCAAAATTTCCATGATTATACATATAATTACAGTATCACTTACCAATTAACGCATTGATTTAAACCTTCTTGGGATTATGTACTTAAGTGTAAAAATAGGTAATTCAAACATCAGTCAAATACTCAGCATCTCTTTAAGATGGCAAAA----TCGTGAGCCACAGAACACTATGCATCTCGTTTCTCTTGTGGAAGAAAAACAT-----ATTATAACATAGAGATTATGAGAGATGTATCATA--ATTATGTAGCTGTGGCTATTAT-GCAGTAGCTGGACCACACCGATAAACATCATGA---AATTGCTTTTCTTTAGTAGTGGGAGCAAAGCACTTCATATGCAGTACTTCATCTA-AGTGTCCCACTGCCCTTTACTCAATAAAACTGAGCCTTCATGGCTTTGTTTTTTGGTTTTGCTTTGTTTTTTAATCTCCCACACGCAAAACAACTCGGCCATAG-----CAACCAGGTGTTTAACAGATAGATAAGCAAACAGACAGATTTATGAT----ATTTTACTGTCACGCTTTAAACAAGGGCAGTAATTAATGCAGATTTATATTGTACAGTAGTTCTTGATAAAATTGCCTGTTATAAATGTTAATATAC-CTTTTATA-----CGACAGCACTGAAGTACATGGAGACAACGCAAATTGCAACACAACTCTCTTGCACACCTTATGAAGttaaaatacttatttttacttagtatttacttattttttttttgtaaaaataaaaaaCTCAaaggccaggctggatgtggctctgggcagcctggtctgatggttggcaaccctgcacatagcaggggattgaaacttgatcattgtggtccttttcaacccaggccactctatgattctatgaAAATATTAATTCCGGGCGGCAAATGAAACTGAGGAAGAGTATCCAAAAGGCTATGCTTGCAAGGTGTTTTTCCTGTCACATTTTGTTTTTAATATTAAGACCCTTTTATCC-ACTTTTCAACTGAAT---ATCTGTCATTTCATGCCTACGCCTTCGGGGGGGGGGGGAAATCACATCTGGAAGCAAATCATGATG--------TTCTTCCATTTTTCCCTTACCTCAGTTTTGTGAGTAATCCTTTCGCATTGCCACGGAAAATTAGAAT-------ATATAATAAAGCAGC--CAAATTCCAACACAT---GATATTGCTT----------------GCAGTAACACAGTAGAGCAGAGATGTGTA-ACTCCT---AGAATCAGAATCTGATTAAAGGAATTT------GTACTGTTTAAAGGGAAAGAAAGTTATCTAACTAGAAGAAATAAAAATTAGCTTTAAA---------------------------------------AAGCTTTATTTTCAT--------------------------GTAAAGCCTT------TCTCACTACGTACGTTTCATGAC---TACCACTGA------------CTGTCAAAAATAACATC-------------AATTTTAAAAGCTAAAGTATTCTGTCCCTTTCCTATCTTAAGAC---ATTTTAAAAGTG--------CAACACTTACA-------------TAAGATGCTATTTAAGG--CAAAGTATCCTATC----GTGCTTCAA-CTTTTTATCAGTGTACAAATAAATGGTGCAGTGGATATAAACGCTTTCTTCTAAAACATTTACATGTACATCAAAGCCA-TAAA---ACTGACCCTTGTCAATCACTGTAACTCAACTGTGAGAAA-TCTGGAGGGTGCTGTCAGCAGCTGTTTAATAGAATGGGGAAAAAAAAGCAAAAGGAAAA--ACTCTTAATAGCAATA--GTGCAGTTTCCTCAGGCATTCAGTACCAGATAAGACCCAGTAGTGACCTTAAAACTATATACTATAGCTTAAGTATGGTATTGTGTTCACAGTACTTCCACATCTAGGGCGTCAGTCATGCAACCTTAACACAAATGTTCAACCTGTTAGAAAGTTGGCTTGCGTGTATCT-TTTCTCCCAGTCCAAGATAAGCCCCTTGCAC----AGCTTTGTAATGACTGTAAAAATACATATATATTGTTAATAGCACCACACTGAAA .::..:.:...x...x:.:x..:.:---:..:.:x...x...:...---...:.:.......-:..........:.....................:.:....:..:.:........................................................................x......:.:.x.:..x:.:...............:x...x...x...........:.xx..xx:.x.....:..:.:......x.............................................................:::.........:..................x.....x.......:...............................:..............................:..x..x...x...----------.:.x....x:....::....::::....::.:xx.......:----x.:..::x::..:xx:x.:.:x.....x:........:...........x..-----..x:....----......:::::...::x.:.x.--..:.:.-:..::.:::....:.-x..:..:..........xx..:.x....:..:.---...x..------:x...xx....:--...x:x:x....x.x.x.x.x.x:x...:-..x:..x:.--------..:.:-........--..:.::x.:....x.x..x..:--------..:.........:.x.::.------.:..x.:x..x:...:-----.x....----..x:....x..x....::.:...:--....x....:.----...:.x..x.---:.....:.....x::.:.........-----...-:.:..x:xx..x.:..xx........x..::...x............:.-.:..:...-----x..:..::x....:xxx:x:..x....x.x....x..x...:.:.x:x.x.:..-----....----.....x.-------------...--------------------.....:...x...:-----------------------------..:.x...:.------------------x.:...:.--------...:.:..------------..x.:....-------------------------------------------------------..x..:..---------------------------------......x.x.xx.x...:.x..........:.xx.....-..:x..x::......---...xx....x...:x:..:.:.:...----:...:.:...x........:.:.x.....::.x...--------...:.xxx........:.xx:x:x::...x...:....:x...-.x..:x....:.:....x.:.:.-------.xx...:..x.x.::--...::.::x.....:---..x...:..:----------------:..:...xxxxx.x:.:x..::...:x..-..x::.---.:...x.::......:...xxx..x..------x........xxxx:.x....----..xx....xx:.:x..x:.x....xx.x......---------------------------------------.::.:..:.::.:..--------------------------........:.------.xx:...x....-:..:..x:..---...:.:...------------:.x.x.:.x....:.x.-------------.:.x.:.:..:x...---..:.x:::...:::...x.:.x..x.---.x......:.x.--------..:x:...x:.-------------:x.::...:......::--x....x.x.x.x..----:x:......-..::..:x...::...:..:...x:xx....:-......xxx....::.:.:......--------------...x...-.:..---.....xxx..-...:::.......::.....:..x....-.....:..----...........::.:....:..x..::..:x:...::.:x.x:....--::..:...........--..::.....:x.-:.x....xxxx::.......x.x..:.:..............:..::.:...:............xx.x...:...:x.:.xx.x:::.x..x:.:x:.x..:x..:...:...:x..:...x.:....x.....xx..:x:...........:..xx-...:....xx..:.:x:.x.-----.::...----.:::..:......::xx.......::..:x.xxx.x:.....:x.:.:....... 25M3I18M3I13M1D386M10I42M4D52M5D8M4I22M2D6M1I15M1D33M3D6M6I12M2I29M1D9M8I5M1I8M2I22M8I19M6I16M5D6M4I24M2I11M4D10M3I26M5I3M1I49M1D8M5D54M5I4M4I7M13I3M20I14M29I10M18I8M8I8M12I9M55I8M33I39M1D15M3D26M4I36M8D43M1I23M7D15M2D15M3D10M16D29M1D6M3D27M6D20M4I34M39D15M26D10M6D12M1I10M3D9M12D17M13D15M3I26M3D12M8D11M13D17M2D14M4D9M1D32M1I25M14I7M1D4M3D10M1I28M1D8M4I47M2D16M2D12M1I158M1D20M5I6M4D55M 1371/1951 70.3% 2256/94230402 0.0% 531/1951 27.2% 6524832 NA +41594 chr4 + 190214555 24424658 24424657 24426834 2177 TCCAGTATCCATCCCAGTTAGAATG---CCATAGTCCCAAGCGAGA---TGCACTATAAAAAGCATAATTTGAGCATCATCTCTCATCATTCAATATAGTTTTTCAACCCTTTCAAAATTACATTGAAAAATCTATATAATGTGTGCTTAGATTAATGAACTGTTTGAATCTGGATCAATAAGCACTCGAGGCTCTGTGCCGTTGACACCTGCTGGGAACATCTAGAAGAATGCTTCGTAGAGGGCAGAGCCAGTCGGCACTTTGAAACTACAGGGGTTCCACTTAATAAACAAGCAATCTAATATATGACCTCTGCAGATTAATTTTCTGAGAGCAAGCAAATAATCTGGATTCAAATTTTCCCTGATTATGCATATAATTACAGTATCACTTACCAATTAACACATTGATTTAAACCTTCTTGGGATTATGTATTTCAGAGTATAAA----------AGAGATCATCCAAACGCTCAATGCCTCTCCAGTTTGGCAAA-----GAATCACATGGAATGCAACTTCCCACCCATCTGATTTCTCTTATGGAAGAAAAAAAT-CTGTGATGGTAAC----AGATTACAGAGGATACCTTAAAATATCACG-GGCCATAATTATTGTCTCAATAACTGGACCACAAGGACACACATTATAACATAATAGC------CAAGTCTTGGGG--AAACTTTGTCATCTCCTGAAATATTTCTGTAGAATCATA--------TATTT-ATAAAACT--GCTTCTCTAGCTTGGATTATTA--------TTATTTTTTAATTTACTGC------AGCACCCAGGGTATAATTTATCCACCA----TTAGACAGTTACATAAATAGACAA--AGATATATGGTGGAGATTCTTCTCT---ACTTTAGACAAGTATAATAATTAATG-----TTA-GTCGTTTCTTATTCCTACATAAAATTTCCCATTAAAAATGTTAATATGCT---------------------------------------------------------------CCTTCATAAGTCCAGATAGTGA-----------------------------TGAAAACAGAAGATACAAG---------GAAAATAGCTACA-------------------TAGCATGCATACATATGTAAAAGAAGT-----------------------------------------------------TAAAAGTAATAAATCAACATGGCCAATATAAC-GAAGCCTGCTGTCCAACAG--------TAAAAG---------CTGTCAGAATGAGGTTTCATTATTAAGACCTTGATATCCAACCGTTGGGCTGAATAAAATCATTCATATCACTTCTGCACTTTC-------AGGGAGAGAATTCACATCTAGGATCAAATTGTCATGGTGCCGAATTCCTGATTTTTTCCCCTTGTGTTACTTTCTGAATAATTATTT-GAATCTCCACAGGAAATGAAAGTTGACTAAAGCTAACAACGAAATAACAAGCTTTTACACACAAAGAAATTACTCTATGGTGTTTTATTTAACAATAAATATTTCAAAAAGGAATGCTTACACATTTGAAAAAATAAAGATCTGACTAATTCAAATTCCAGCCCTACTGTTTTCTCAGTAAGA----TAAGTAACACAAGCAATCATAAATATGGTTTAAAATTACAACGGGGAGGGAACACTTGCAATCAGTTAAGTTTAGACCTTGTCCTTATTTCTTCTTACAGAAGAAGGTAGAGAGGTAAAGCCCTCTAATATAATACTTCGTA-ATTCCAGAACATATACTATTGATATTGTGATTCTTTCTGAGACATAATAACTAATTATTCAGAAAGTGTCAGAAAATAAATCCAACTCCTCCTCTAACCTTAGTCCCTAATTTAAAGGGGAAGAAAAACAGGGCTTCTAAGGATGAAAAGTC----CCAAGTGCCATTTAAAAATAAAAGGAACATTTCAAATAAACTTCAATCTCCTTGACAGCATACGAACAAAAACAGCAGC-GATATACCAGCTTCTTCCCAAAACA--------------AAACCCAGTGAAATTACTGAGAATT-TCAGCTACTGTAATCCAACTATGTGAAACTCTGGGGG----TGTCAGCAGCTACTCAATAAAAAGGAAAAGTGAAAATAGTACAA-AAATGGTTCCTAATAGCAATAATGTATAGTTTTGT-GGTCATTACTGGTCAGATAATAACCGGCAGTGACCTTAAAACCATGCATTATGGCTTAAGTATGGGCTAGTGCTCATTGCAGATGTGTAGCTTAGAAATAAGCAATACAATCTTGCCATAAAAGCTCAAACTGTTCCAAGTCTGGCTTGCGTGCATGGATTTTTCCCTCTCTAGTGTTA-----TCACACCAGGAATCTTATAATGATCTGAAAAATATGTACCTTAGGGCAATAGTTCTATACTGAAA chr4 - 94230402 17893906 17893905 17896175 76334228 76334227 76336497 2270 TTTAGCACCCAACCCCACCTGAGTAGGTTCACAAACCCCAGCGAGAAGATGCGCCATAAAAA-TATAATTTGAGTATCATCTCTCATCATTCAATACAATTTTCCAGCTCTTTCAAAATTACATTGAAAAATCTATATAATGTGTGCTTAGATTAATGAACTGTTTGAATCTGGATCAATACGCACTCAAAGATTTGAACTGTTGACACCTGCTGGATACAGCTATAAGAATGCTTCATTCAGCTTATAGCCAATCAGTACTTTGTAACTACAGGGGTTCCACTTAATAAACAAGCAATCTAATATATGACCTCTGCAGATTAATTTCTCGAGAGCAAGTAAATAATCTGGATTCAAAATTTCCATGATTATACATATAATTACAGTATCACTTACCAATTAACGCATTGATTTAAACCTTCTTGGGATTATGTACTTAAGTGTAAAAATAGGTAATTCAAACATCAGTCAAATACTCAGCATCTCTTTAAGATGGCAAAATCGTGAGCCACAGAACAT---------TATGCATCTCGTTTCTCTTGTGGAAGAAAAACATATTATGAT-ATAACATAGAGATTATGAGAGATGTATCATA--ATTATGTAGCTGTGGCTATTAT-GCAGTAGCTGGACCACACCGATAAACATCATGA---AATTGCTTTTCTTTAGTAGTGGGAGCAAAGCACTTCATATGCAGTACTTCATCTA-AGTGTCCCACTGCCCTTTACTCAATAAAACTGAGCCTTCATGGCTTTGTTTTTTGGTTTTGCTTTGTTTTTTAATCTCCCACACGCAAAACAACTCGGCCATAG-----CAACCAGGTGTTTAACAGATAGATAAGCAAACAGACAGATTTATGAT----ATTTTACTGTCACGCTTTAGACAAGGGTAGTAATTAATGCAGATTTATATTGTACAGTAGTTCTTGATAAAATTGCCTGTTATAAATGTTAATATACCTTTTATACAGCAGCACTGAAGTACATGGAGACAACGCAAATTGCAACACAACTCTCTTGCACACCTTATGAAGTTAAAATACTTATTTTTACTTAGTATTTACTTATTTTTTTGTAAAAATAAAAAACTCAaaggccaggctggatgtggctctgggcagcctggtgtgatggttggcaaccctgcacatagcaggggattgaaactcgatggtcattgtggtccttttcaacccaggccactctatgattctatgaAAATATTAATTCAGGGCGGCAACTGAAACTGAGGAAGAGTATCCAAAAGGCTATGCTTGCAAGGTGTTTTTCCTGTCACATTTTGTTTTTAATATTAAGACCCTTTTATCC-ACTTTTCAACTGAAT---ATCTGTCATTTCATGCCTACGCCTTCGGGGGGGGGGGGGGGAAATCACATCTGGAAGCAAATCATGATG--------TTCTTCCATTTTTCCCTTACCTCAGTTTTGTGAGTAATCCTTTCGCATTGCCACGGAAAATTAGAAT-------ATATAATAAAGCAGC--CAAATTCCAACACAT---GATATTGCTT----------------GCAGTAACACAGTAGAGCAGAGATGTGTA-ACTCCT---AGAATCAGAATCTGATTAAAGGAATTT------GTACTGTTTAAAGGGAAAGAAAGTTATCTAACTAGAAGAAATAAAAATTAGCTTTAAA---------------------------------------AAGCTTTATTTTCAT--------------------------GTAAAGCCTT------TCTCACTACGTACGTTTCATGAC---TACCACTGA------------CTGTCAAAAATAACATC-------------AATTTTAAAAGCTAAGTTAAA---TTATTCTGTCCTT--TTCCTATCTT-----------AAGACA----TTTTAAAAGTGCAACACTTACATAAGATGCTATTTAAGG--CAAAGTATCCTATC----GTGCTTCAAT-TTTTTATCAGTGTACAAATAAATGGTGCAGTGGATATAAACGCTTTCTTCTAAAACATTTACATGTACATCAAAGCCA-TAAA---ACTGACCCTTGTCAATCACTGTAACTCAACTGTGAGAAA-TCTGGAGGGTGCTGTCAGCAGCTGTTTAATAGAATGGGGAA--AAAAAAAGCAAAAGGAAAAACTCTTAATAGCAATA--GTGCAGTTTCCTCAGGCATTCAGTACCAGATAAGACCCAGTAGTGACCTTAAAACTATATACTATAGCTTAAGTATGGTATTGTGTTCACAGTACTTCCACATCTAGGGCGTCAGTCATGCAACCTTAACACAAACGTTCAACCTGTTAGAAAGTTGGCTTGCGTGTATCT-TTTCTCCCAGTCCAAGATAAGCCCCTTGCAC----AGCTTTGTAATGACTGTAAAAATACATATATATTGTTAATAGCACCACACTGAAA .::..:.:...x...x:::x..:.:---:..:.:x...x.......---...:.:.......-:..........:.....................:.:....:..:.:........................................................................x......:.:.x.:..x:.:...............:x...x...x...........:.xx..xx:.x.....:..:.:......x.............................................................:::.........:..................x.....x.......:...............................:..............................:..x..x...x...----------.:.x....x:....::....::::....::.:xx.......-----..::....x::x..---------:.:x.....x:........:...........x..-:.:....-:....----......:::::...::x.:.x.--..:.:.-:..::.:::....:.-x..:..:..........xx..:.x....:..:.---...x..------:x...xx....:--...x:x:x....x.x.x.x.x.x:x...:-..x:..x:.--------..:.:-........--..:.::x.:....x.x..x..:--------..:.........:.x.::.------.:..x.:x..x:...:-----.x....----..x:....x..x....::.:...:--....x....:.----...:.x..x.---:...........x:..:.........-----...-:.:..x:xx..x.:..xx........x..::...x............:.:---------------------------------------------------------------....xxx....:x.:...x.x.-----------------------------.:....:.:..:.:x...:---------.:.x:.:...x::-------------------.:...xx.x.:..:..:xx.::.:.x.-----------------------------------------------------.:...:..x...x...:x::...x.x.:x...-..:.xxx:x.:.....x..--------.:x...---------......x.x.xx.x...:.x..........:.xx.....-..:x..x::......---...xx....x...:x:..:.:.:...-------:...:.:...x........:.:.x.....::.x...--------...:.xxx........:.xx:x:x::...x...:....:x...-.x..:x....:.:....x.:.:.-------.xx...:..x.x.::--...::.::x.....:---..x...:..:----------------:..:...xxxxx.x:.:x..::...:x..-..x::.---.:...x.::......:...xxx..x..------x........xxxx:.x....----..xx....xx:.:x..x:.x....xx.x......---------------------------------------.::.:..:.::.:..--------------------------........:.------.xx:...x....-:..:..x:..---...:.:...------------:.x.x.:.x....:.x.-------------.:.x.:.:..:x...:.:x..---:.x:...:x....--.:....x:..-----------..:...----..:...:::..x..x:::----:x.::...:......::--x....x.x.x.x..----:x:.......-.::..:x...::...:..:...x:xx....:-......xxx....::.:.:......--------------...x...-.:..---.....xxx..-...:::.......::.....:..x....-.....:..----...........::.:....:..x..::..--:....x..:.x..-:..x:::..:...........--..::.....:x.-:.x....xxxx::.......x.x..:.:..............:..::.:...:............xx.x...:...:x.:.xx.x:::.x..x:.:x:.x..:x..:...:...:x..:...x.:....x.....xx..:x:...........:..xx-...:....xx..:.:x:.x.-----.::...----.:::..:......::xx.......::..:x.xxx.x:.....:x.:.:....... 25M3I18M3I13M1D386M10I41M5I14M9D34M1I7M1D5M4I22M2D6M1I15M1D33M3D6M6I12M2I29M1D9M8I5M1I8M2I22M8I19M6I16M5D6M4I24M2I11M4D10M3I26M5I3M1I50M63I22M29I19M9I13M19I27M53I32M1I19M8I6M9I39M1D15M3D26M7I36M8D43M1I23M7D15M2D15M3D10M16D29M1D6M3D27M6D20M4I34M39D15M26D10M6D12M1I10M3D9M12D17M13D21M3D13M2D10M11D6M4D18M4I17M2D14M4D10M1D31M1I25M14I7M1D4M3D10M1I28M1D8M4I29M2D13M1I21M2D12M1I158M1D20M5I6M4D55M 1373/1960 70.1% 2270/94230402 0.0% 527/1960 26.9% 6530752 NA +3087 chr4 + 190214555 24429741 24429740 24429798 58 TCCCAGGTTCAAGTGATTCACCTGCCTCAGCCTCCCAAGTAGCTGAGATCACAGGCAC chr4 - 94230402 18197140 18197139 18197197 76033206 76033205 76033263 58 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .:.::..........x.....xx.x........::..........::.::...x.::. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 6232601 NA +3569 chr4 + 190214555 24437606 24437605 24437695 90 GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTAGTTTTGGTTTTTTGGGGGTTTTTTTCTTTCTTTTTTTTTCTTTTCGAGATGGAG chr4 - 94230402 87469841 87469840 87469927 6760476 6760475 6760562 87 GCTGTTTTAACTGGTGATGTTTTTTTGCTTGCTTT---CTTCGTGTTTTGGGGGTTTTTTTGTTTGTTTTGTTTTGTTTTTGAGAGAGAG .:....x.x::..x..x....x..x.xx...:...---:..x..x................x...x....x....x....:....x:... 35M3D52M 65/87 74.7% 87/94230402 0.0% 3/87 3.4% -63032235 -31198167 +3258 chr4 + 190214555 24437616 24437615 24437676 61 TTGTTGTTG--TTGTTGTTGTTGTTTTAGTTTTGGTTTTTTGGGGGTTTTTTTCTTTCTTTTT chr4 - 94230402 52409355 52409354 52409417 41820986 41820985 41821048 63 TTTTTGTTGAATTTTTTTGGTTGCTTTTGTTTGGGTTTCTTGGGGGATTTTTTTTTTTTTTTT ..x......--..x..x.x....:...x....x.....:.......x......:...:..... 9M2I52M 50/61 82.0% 63/94230402 0.0% 2/61 3.3% -27971739 -66258663 +3143 chr4 + 190214555 24437616 24437615 24437678 63 TTGTTGTTGTTGTTGTTGTTGTTTTAGTTTTGGTTTTTTGGGGGTTTTTTTCTTTCTTTTTTT chr4 - 94230402 61538564 61538563 61538626 32691777 32691776 32691839 63 TTGTTTTGGTAGCTGTTGTTGTTTTGGTTTGGGTTTTTTGCTAGTGATTTTTTGTTGTTTTTT .....x.x..x.:............:....x.........xx:..xx....:.x.:x...... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -37100948 -57129454 +3142 chr4 + 190214555 24441706 24441705 24441800 95 AAGAGGAGGGAAGGAAGAAAGGAGGAAAGGAGGAGGGGAGGAAAAGGGTGGAAGAAAGGAAGGAG-AAAGAAGAGAAAGGAGGGGAGGAGAAGGGA chr4 - 94230402 36691892 36691891 36691973 57538430 57538429 57538511 82 AGGAGGAGGGAGGGAATAAAGGAAGA--------------GAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA .:.........:....x......:..--------------.....x::::.:..:.....:....-:.......:....x.:x::.xx.....:.. 26M14D25M1I30M 59/81 72.8% 82/94230402 0.0% 15/81 18.5% -12250186 -81980216 +30826 chr4 + 190214555 24464008 24464007 24464507 500 TTCAGAAAGGGTTATATATGCAAATAAATATACATTCTGG----TTGCAACATTAAATAATGAGGCAAACTACAGTTTATAAAATGCAGTTGTTCCATGCCACATTTCATTTTAGGAGAGGGAGGCCTACAGCCAACTGTGAACAATTACCAAATTGTCAGTGGAATTCAATAAATGTTGTTT--AAAAAAACTAATTATTTGTTACAATAACCAGCTACTACTGCCACTTTGTATTTGGAGGTTTGTAAACTACTTCCATTTGAAATGTAATTGATTCCATTTTTATCATTTGTTCAAGTTTATGTGGTTGTTCTCATCCTAAGAGATGATAACATCTATTTTCAGCAAATTATACATTATAATTCCTCATTCAAAAGCTGTAACAGAAAACAAAATGCTAATTTATGCTGTAAATGAAACTACAGAATCATAATCACTCATTGTTAACATTAGGGACTAAACTGCTACTGGAAATAATAAATTGGAGC-AGAATGTGTAGGGGTT chr4 - 94230402 17931077 17931076 17931575 76298828 76298827 76299326 499 TTCTGGAAGGTTCATACAGGCGAACA----TCCATGATGAAAGCTTGAAACAGAGACTAGAGAGGCAATCTGCAGTTTTAAAAGTGCAGATACTATGTGGAACGT---ATTTTGCAAGGGGAACGCTTA-AACCCTCTATAAACAATTACTAAATTGTCAATGGAATTCAATAAATGTTGTTTTAAAAAAAACTAATTATTTGTTACAATAGCCAGCTACTATTGCCATTTTGTATCTGAAGGTTTGTAAACTACTTCCATTCGAGAAGTAATTGATTCCATTTTTATCATTTGCTCAAGTTTATGTGGTTGTTCACATCCAAAGAGATGATAACATCTATTTGCAGCAAATTATACATTATAATTCCTCATTCAAAAGCTGTAATGGAAAACAAAATGCTAATTTATGCTGTAAACGGAAGTACAGAATCATAATCACTCATTGTTAACATTAGGAACTAAATTGCTCTTGCAAATAATAAAATGGGTTAAAAATGTGGAGGGCTT ...x.:....x.:...:.x..:..:.----.x...xx..:----...x....xx:.x..:x.......x..:......xx...:.....x.::.x::..xx..:.---.....:x:..:..:.x..:..-.:..xx..:.:.........:.........:......................--..........................:..........:.....:.......:..:......................:..:.x..........................:....................x.....x.....................x.........................................::.............................:.:..x..................................:......:....x:..x..........x...:x:-.:......x....x.. 26M4D10M4I61M3D21M1D53M2I305M1I16M 416/492 84.6% 499/94230402 0.0% 15/492 3.0% 6532931 NA +19784 chr4 + 190214555 24464646 24464645 24465796 1151 TTTTAGCTATTACCTGCAGCTCTCTA--TTTGAAATCTATA-GAAGACGTGCTCACAAAGCAATCAGACGTGCACACTACAGAGGGGA------------AGCAGATTAGAACTACACACCTGCTCTTCCACATTCCATTAAGTTTCCACATCTACATTTCCCTTTGCATCAACCATCTCCTCCCCTGCCCGCTTCCCTCCTCCCCTCCACCGCATGTTTCTCCTGTATGAAGACCCCAGCGTAACCTCTTCTGGTCAAGGTGAGCCTCCCCCAGTAGCAAGCTTCCCCTCTGCTTCAGCAACTACACCGAACAAATGCATAAATGCACATAAACCCAGTAACTTTTTTTAAAGATGGGGTCAGTAGCTACGATTACAGGCACACGCCATCACACCTGGTTATTTTTATTGTTCTTTAGAGATGGGGGTCTCCCTGTGTTGCTCAGGCTGGTCTTGAACGCCTGGACTCAAGGAATCCTCCTGCCGCAGCCTCCTGAGCAGTTGGGATTACAGGTGCGAAAAACCGTGCTCTGGCAAAATCAGTAAATTTCAATAAATATAGTCAACCCTTATTAACACACACAAAAAGGGTGGGGGTGGATCTGGTACCATATTCTAGACACTGCTTTGTTGAAATAACGATCTTCATGTGAAAATAATGTAATACCACCTAATGGCATTTTCTCCTTTCTTCTTTTTTTAAAACAT-AGAATCCGAAAGAAAGAAACATTTTAATATAATTATTATATCAAA----------AAGGTGAATT--TTTCAAAAGGACCAAAA---AGTCACACTGCCTTCTAGAGTAAATCACTTTTCTGCTGCCCTTTTAT--TTAATGCC-GTCTGCTGTACACATTTACCTCTTCGCTGGCAAAGTGTGATCATTGATTTCCTATGGTCTCTCTGGAAGGAAGTTCTGCTTCCTTGATGATGAATACAAGGGGTAGGTGACCCCATTCTCATTCCAATGCAAGCCTTGCACTTTTACATTTCCGCTAGGGCTACAGGAACGTGAAAGCAGTGAGAAACTCCTTGCCCTCTTCATAGAGACTGTCTTGCTGTAACTACTGACATTTAATGTTTTCCCTCCGCTTCCCACAACTGTATTTTGGAAGATCACAAAATAAGGGCTGAACCACTAAAAGGCATTAGTTCATGATGGACATAAATGT chr4 - 94230402 17932363 17932362 17933268 76297135 76297134 76298040 906 TTTTAGCAATT--TTACAGTCCTATAGGTTTCAAATGTACAAGAAGATTTGCTCACGCAGCAAACAGAC------ACATCAGAGGAAATAAAAAACCACCAGCACATTAGGACTGTGCACCTGCTCTTCCACATTTCATTAAGTCTCTACACCTAAACGTAC-------------------------GTCAGGTTCTCTCCTCT----------GTGCATCCGTTGCGCTGGTATCCCTCAGTGATACCTTCTGGTCATAGCGAGACAAACTGGATTGCAAGCATCCACACTGCCTCGGGAAAAACAC--ACTAAA---------------AAAGCCATTAACTTTTGGTAAG--TCAGGTCAG-----ACGATTATAA---------------------------------TCT----AAATGA-----------------------------TAAATGCC------------------------------------------AGATAATAGGTTCAAAAACATGTG---------------TATATTTT--TAAATA-AGCTGCCGTTTGTCAACA-----------------AGTCTCTCCCAGCTCATATTATACA---------GCTCAAATCCCAGC---------AAAACAGTTTG----------------------CTTGCCAGCTTTTCCTCAGATATTAGTATTAGGAA---------------ATACAATTATGTTATCAAACAAAAAAAGAAAAGAAAATTGCTTTTTAGGTGACCAAAAGAAAGTTCCACTGCTTCACGTAGTAAATCATTTTACTGTTGCCCTTTTATATTTAATACCCTTCCGCAGTACACATTTATCTCTACACTAGCAAAGTGTACTCATTGATTTCCTATGGTCTCTCTGGAAGAAGGTTCTGCTTCCCTGATGATGAGTACAAAGGGTGGATGACCCCGTTCTCATTCCAATGCAAACCCTGCACTTTTACATTTCTGCTTAGACCACATGAACATCTGACCAGCTCAGAACTCCCTGCCCTCCTCCTACAGAACACACTGCCAGAACCACTGACATTT-----------TCTCCCCCACGTAACTATTTTTCAGCATCCTGC---CTTACGAATAAAGCACTGAAATGCATTTGTTCATCACAGACATAACTGT .......x...--:.:...::..x..--...x....x..:.-.....:x.......:x.....x.....------..xx......::.------------....x.....:...:::..................:........:..:...:...x.:x.x.-------------------------.:.x.x...:......:----------:..:x..:x:..:::x::x.:...xxx..:.:x:..........x:.:...x.xxx.:x::.x......x...x.x....:..:.x..xx....--.x:...---------------...x...x........xx...:--.x:......-----.......:.:---------------------------------...----.:...:-----------------------------.:..:...------------------------------------------:...x.:....x.:....xx:...---------------..x....:--......-..:::x.x:..:.:....-----------------:..xxx..:x:xx:......x..x.---------.:.x....xx.:::---------....:.:.x.:----------------------.:.x:.xx.....::.x.:.:..-..x..:x.:..---------------...:......xx.......----------..:.x:....--...:x.::x........---...:x......:.:x::x.........:...x...:...........--.....:..-x..:..x...........:....x.:..:.........:x.............................:.:...........:.........:.....:....:.:.......:.................:..:................:...x:.:.:...x....:.xx:.x...:xx::......:.......:..x..x...x:::x:...::x...:..........-----------..:x.::.x.::....:.x...::.x.xx:::.---x.x.x.:x.:..x....:...x.....x......x.::.......x... 11M2D13M2I13M1I27M6D13M12I62M25D17M10D94M2D6M15D22M2D9M5D10M33D3M4D6M29D8M42D24M15D8M2D6M1D18M17D25M9D14M9D11M22D23M1I11M15D19M10I10M2I17M3I47M2I8M1I235M11D33M3D49M 622/872 71.3% 906/94230402 0.0% 313/872 35.9% 6532283 NA +3004 chr4 + 190214555 24466909 24466908 24467046 138 AAGGAAGGAAGGGAAGGAAGGGAGGGAGAGAAAGAAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAG chr4 - 94230402 89963537 89963536 89963674 4266729 4266728 4266866 138 AAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAAAAATCGAAGAGGAAAAG .....::...::.x.::.xxxx..x:x......x.:xx....:...:.x.:::..::xx......:x..:.:x::..:..x.:.x::x...:..x..xx.x.:......::.::...x...:.:xx::....::.:.. 138M 76/138 55.1% 138/94230402 0.0% 0/138 0.0% -65496628 -28733774 +3022 chr4 + 190214555 24466915 24466914 24466952 38 GGAAGGGAAGGAAGGGAGGGAGAGAAAGAAAAAGAAAA chr4 - 94230402 47096775 47096774 47096812 47133591 47133590 47133628 38 GGAAAGGAAGGAAGGGAGGGAGAGAGAAAAAAAGCAAA ....:....................:.:......x... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -22629860 -71600542 +3180 chr4 + 190214555 24466917 24466916 24467102 186 AAGGGAAGGAAGGGAGGGAGAGAAAGAAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGA---AAGG---GAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 22272878 22272877 22273069 71957334 71957333 71957525 192 AAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAAA ...::x...x.:...:.x:.::...::x.xx..xxxx.x:.:.......::::.::::...:.......:xxx...:x:..xx.:.:.:xx.xx..::xx....:..:x:.x::.xx....:::..:::.:..x...x.x......:....:.:.x.....---...:---.....:x...:x.xx...:.. 161M3I4M3I21M 104/186 55.9% 192/94230402 0.0% 6/186 3.2% 2194039 NA +3189 chr4 + 190214555 24466982 24466981 24467078 97 GAAAGGAGGGAGGGAGGAAGGAAGGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAG----AGAGAGAGAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAA chr4 - 94230402 53268254 53268253 53268354 40962049 40962048 40962149 101 GAAAGGAGGGAAAGGGGAAGGAGAGGCAGAAAGTAATGTGGACAGAAGGAGAAATGGCCCCAGAGACAGTCAATCGGAGGAATCCACAAAGAGACAAGAAA ...........::.:.......::..x......x..x:x:..x....:......x:.----.....x..xx..xx:..:::.xxx.x.....:.x..::.. 57M4I40M 65/97 67.0% 101/94230402 0.0% 4/97 4.1% -28801272 -65429130 +3338 chr4 + 190214555 24467010 24467009 24467107 98 GAAAGAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAGAGAGAAGGAGG chr4 - 94230402 61334701 61334700 61334798 32895605 32895604 32895702 98 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGG ......:.....x......x.:x.:...:..:x:::....x:xx..x....xx..x.::...x.x...:.:x..x..::.:.:.x..::....:.... 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% -36867691 -57362711 +3035 chr4 + 190214555 24467036 24467035 24467097 62 GAGAGAGAGAGAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAGAGAGAGAGAGA chr4 - 94230402 9237699 9237698 9237760 84992643 84992642 84992704 62 GATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x.x..x.:....:....:x..x::...:.....:....:.....:.:.:.:.:..:.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 15229337 NA +3068 chr4 + 190214555 24479167 24479166 24479266 100 AGAAGGAGAAGGAAGAAGAAGGAAGAAGGAAGAAGGGGAAGGGAAGGGAATGGAAGGGAAGGG---------------AAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA chr4 - 94230402 65171431 65171430 65171545 29058858 29058857 29058972 115 AGAAGGAGAGGGAGGGAGAAGGAAGAGGACAGAAGAGAAAAAAATAAAAGTAGACTGGAAAAGTCACTGCTGAATTCTGTGGGAAGAAGAAAAGAAGCAAGCCAAGTGAGAAGAA .........:...:.:..........:.:x.....:.:..:::.x:::.:.:..xx....::.---------------:x......:::.::::.:.x...xx...x..:::... 63M15I37M 62/100 62.0% 115/94230402 0.0% 15/100 15.0% -40692264 -53538138 +3306 chr4 + 190214555 24493206 24493205 24493296 91 CAACATGG-----TGAAACTCTGTCTCTACAGAAAAA--ATAAAAAATAAAAAATAATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 60979312 60979311 60979409 33250994 33250993 33251091 98 CAATATGGGGCATTAATATTCTTTTCTTGTAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ...:....-----.:.x.:...x.:::.::.:.....--.......xx..x...x.x.x........:...:.:.:.............x.x.x.x.. 8M5I24M2I59M 66/91 72.5% 98/94230402 0.0% 7/91 7.7% -36486106 -57744296 +3046 chr4 + 190214555 24493256 24493255 24493314 59 TATATATATATACACACACACACACACACACACACACACACACACACATACACACAAAA chr4 - 94230402 8395817 8395816 8395875 85834528 85834527 85834586 59 TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:....:...:.x:...:xx.:.................x.....x..:x.:.x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 16097439 NA +3903 chr4 + 190214555 24495527 24495526 24495633 107 CAGACAGAAAGAGAAAGAGAAAGAAAGAAGGAAAAAAGAAAGGG----GAAGAGAAGAAAAGAGAGAGAAGGGAGGGAGGGAAGGA---AAAAAGGAAAGAAAAAGGAAGAGAG chr4 - 94230402 86597945 86597944 86598058 7632345 7632344 7632458 114 CAGAAAAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATGAAAGGGATATAAAATGGCACAGGG ....x.:.:.:..:x..::....:x............::x..:.----x..x.:...:..x....x..x.....x.:.........---:...:...x.x....x..x.x..:. 44M4I38M3I25M 76/107 71.0% 114/94230402 0.0% 7/107 6.5% -62102418 -32127984 +3220 chr4 + 190214555 24495536 24495535 24495631 96 AGAGAAAGAGAAAGAAAGAAGGAAAAAAGAAA--GGGGAAGAGAAGAAAAGAGAGAGAAGGGAGGGAGGGAAGGAAAAAAGGAAAGAAAAAGGAAGAG chr4 - 94230402 67772342 67772341 67772438 26457965 26457964 26458061 97 AGAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAA-AGGAATTGAAGGAAAAAAGAATGGGAAACAGTAGAG ...:..:.:x:..x:..::......x:.....--...x.:.....x...:x..::..:.::-...:.xx............:.x:.:...x:.x.... 32M2I27M1D36M 64/95 67.4% 97/94230402 0.0% 3/95 3.2% -43276806 -50953596 +5516 chr4 + 190214555 24517229 24517228 24517960 732 AAGCATGCAAAAATTAGCTCAAGTAGCTGCAACCTTCTTCTATAAGTATCCTGGTAAATGCTTAGGAGTTTAAGTGTGTATTGTTTATGCTGCAAGAAGCATATGAGGTTGAAAGCATGGATGTGTTATGCCCAGAAACTGGAATCTTAATTCAATAGGGAA---AGAGTCTTCTTCAAGTAAAA--ATAACACAACTAAAAAATTACAAAGTCTTAATACGAACTGTTTAATTGTTATAACAAGATTTGAGAGGCAGGGGTAGGTAAGTAAGTCACCAACTGGCGATAAGTCACCAACTGTTAATATGTGTCTGCAAGTTTCTTGTTTTTCACAATCACTAGATTTACATACAATTATAGGTTATGGTTCTCCATGTACACATACAGTGAAAGACATTTTCCAAATACCTTTTGATGTAGAATGGAACCTGAGACAAAAAAATCACTTAAGAAATCAAATCTCATATAA-TGGAAATACTTTAACCA------CAGCATTCACACATTTGACTGTGGATTCCAAATGCTTATCTAAACAGAGGCAACGCAATTAAACTGCCTTCACTCAAAATGGTGTCAGAAGGCAACTACCCTATTTACTAGCCACTGATAAGTTATGACAACACTATTTCATAGCCTGTCACTATATTTCTTTTAACCCCCCAGCAGTAGGATTTAGGATTTCCTCAACACTAAGGGCTTATCTCAAATGCTTTAGTGCACGAACAGTAAAAAATCAGAG chr4 - 94230402 17957256 17957255 17957807 76272596 76272595 76273147 552 AAGCAAGCAGGAAGTAGGCCCACCAGCAGCA-----CTGCTCTGCAAAGCCTGCTAAGTGCTCGGTGCTGTAAGTGT----TGTTTGTGCTGCTGGAAGCA-ATGAGGCTGGGAACGTTAATGTGGTATGCTTACAAAATAAACACTGAAATCAAATGGAAAGCAAGAGCCTACTTGAGCTAAAAGAATAAGACCAGCCCAAAATAATATA----TGTTACGAGCCACAGAA----------AATATTTA-----------------------------------------TTATCAACAGT-AATTTGTGC----------------------------------------------TATGTTTTAGTTTTCTATACA-ACATA---------ACAACTGC---ATAGCTTTCAAAGCTGGAAAAAACTT-----AAAAGAATCACTCAG--AGCCAAGATGTATACAAATGGGAATTATTTTATCATCTGTCCAACATACATTCA--------------------GCGTTTTTGAGAAACTGCAA---AATTAAAC-ACCTCAAACCA--------TCAGAA-----CTAAGCTATT-----ACCACTG-----CTATAGGAATGTTATTTTACTGC-TGTTTCCATACTTAGTTTAATCCCTTGATAGTGGAAGTTGGCACCTCCTTGATGCCAAACGTTTATCTCAAATGCATCAGTG------------AAAATTAGAG .....x...::..x...x:.x.x:...x...-----..x..x.:x:x.x....x...:....::.x:x.x.......----.....:......x:......-......:..::.:.:.x:.....x.....::.x...x.::.xx..x..x....xx..:..---....:..x...x.:x.....--....x..x.x:xx.....x.:.x.----.:x.....:.:::xx..----------..x....:-----------------------------------------.:.:....x..-...x....:----------------------------------------------..x...x.:...:..:..::.-.....---------...x:.x.---...x....::.x.:x.:.x::...:.-----....:.......:.:--.::...:x:x:...:..-...:...xx...x.:..------..:...x..:x..--------------------..x.x.:.:.:x.:xx....---........-:...:x.x:..--------......-----...xx.....-----:......-----:...::x..:::.....:.:x..-...:x.:...:..xx.....:...:::::...:.:.x..:.x.::....::.::.:..:x.:.............x.:....------------.....:.... 31M5D41M4D20M1D60M3I20M2I24M4D17M10D8M41D11M1D9M46D21M1D5M9D8M3D26M5D15M2D17M1I17M6I13M20D20M3D8M1D11M8D6M5D10M5D7M5D23M1D82M12D10M 364/540 67.4% 552/94230402 0.0% 204/540 37.8% 6559973 NA +49676 chr4 + 190214555 24527445 24527444 24528066 622 AACAAAGATACCAAAGGGCTTTGG--CCAAAATTAGTATAAATAGACTTTATTGAAGTCAGTGCCTCTGTACTGAGACAGAAGATTGTGTCTACATAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGATAATCACATTTT-AGAAGCATTTTCAACCATTTCTAAAGAAATGCTTATAACATTGTTATATATAGAACTACTTTCAATAAACTGCAAAACATTGATCGACTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTTAATTTATGAAATCAGAATGGAATATTTACTGTAAAGAAAAATTAAAAAGCTTTCAAAT-AAAGGCCATTATCGAACCAACGTGAAGAGCACAACTCGAACTTTTGAGTTCATTCATCTTTTAAAGCTGTCCTCTCAATAACTTCAGTTCTAAGCACTGAATTCAGTACTGTGAATATTCCTTGGATTGAAGTTTGGCAATGATGCGGTCCAACTGTCTCTTTGCTTCACACTGTGGGAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAACCTGTTTAGAAGTGGGCAGAAAAATT chr4 - 94230402 17963679 17963678 17964297 76266106 76266105 76266724 619 AACTGAGATACTGACATACTGTGGGCACAAAATTAGTATAAATAGACTTTATTGAAGTCAGTACCTTTGTACTGAAGCTGAAGGTTGTGTCTACATAAGCACAAGTTGTAACATTTCACAACTTCTAAAAGGAATGTCAACAATTACAACGATCATGCATACCATGGTCGATAATCACATTTTTAGAAGCATTTTCAACCATTTCTAAAGAAATGCTTATAACATTGTTATATATAGAACTACTTTCAATAAACTGCAAAACATTGATCAGCTTTTCCAGTATGAGCTACAGTGTCAACACAAAAGGGAGGCATAAATGTTTAATTTATGAAATCAGAATGGAATATTTACTGTAAAGAAAAATTAAAAAGCTTTCAAATAAAAGGCCATTATTGAACCAAAGTGAAGAGCACAACTTGAAC-TTTGAATCCATTCATCTTTTAAAGCTGTCCTCTGAATAACTTCAGTTCAAAGCA-TAAATTCAGTACTGTGAGTATTCCTTGGACTGAAGTTTGGCAATGATGCGATCCAACTGTCTCTTTGCTTCACACTGTGGAAAATTGCTCATGTCATAATATTGAGGGGCAATTTTCACCAGCCTGTCAAAAAA-----GGAAAAATT ...x:......::.x:x:..x...--x...................................:...:........::.x....:...................................................................................................-.....................................................................................::.............................................................................................................-............:.......x...............:....-.....:.:.........................x..............x.....-.:...............:...........:....................:.............................:........................................:.....:x.:..:-----:........ 24M2I157M1I196M1I41M1D54M1D134M5D9M 579/615 94.1% 619/94230402 0.0% 11/615 1.8% 6563766 NA +14183 chr4 + 190214555 24529594 24529593 24529774 181 TACTTACCATTCTGGCTTGATATCTGTACATGTCCGGATGTAATTCTTTGTTGTTAGAACAAACTCATTATAAAGCACCCATTCAGGTTTGTGGTCAAGAACAGTAGAGGGATGCAACTGAACCACCTGGTTATCTTTCACAGTTAAGTAATGCCCTGTTCGTTCTAAATGTGCCACCTGA chr4 - 94230402 17965337 17965336 17965517 76264886 76264885 76265066 181 TGCTTACCATTCAGGTTTGATGTCTGTACATGTCCGGATGTAGTTCTTCGTTGTAAGGACAAACTCATTATAAAGCACCCATTCCGGTTTGTGATCAAGAACAGTGGAAGGATGCAACTGTACCACTTGGTTATCTTTTACTGTTAAGTAATGCCCTGTTCGTTCCAAGTGCGCCACCTAA .:..........x..:.....:....................:.....:.....x..:..........................x........:...........:..:...........x.....:...........:..x.......................:..:..:.......:. 181M 161/181 89.0% 181/94230402 0.0% 0/181 0.0% 6564257 NA +16789 chr4 + 190214555 24532858 24532857 24533188 331 ACATACCTGCATAAAATACCCAGTAACCAAAGCTTTTCTTATATTAATATAATAGTCCCTGCTTGTAAAGTCAGTACTTCGACGAGGCAAATTAAATCTGTCCATAATTCGAGATAGCTGCTGGCGTACATTGTCTGCGGACATCAGGGACCTGTAGTTAATGAAGTTGTCATAACACCACTGAACCGATTCATGATCTAAAAAGGTAGAAGGCGGGGAGAAAAGAAGGCACCATGAATCACCCACACAGGAATGTTCTCTAATTAAAA-AAATTGTTA------TAAAGAATAAGCTAAATAAACCAGAAAGGAGATTTACCCACAACATTTTCTTT chr4 - 94230402 17971820 17971819 17972133 76258270 76258269 76258583 314 ACATACCTGCATGAAATACCCAGTAACTAATGCCTTTCTTATATTGATGTAATAGTCTCGGCTGGTAAAATCTGTGCTTCTACGAGGCAAATTAAATCTATCCATGATTCGTGACAGCTGCTGGCGTACATTGTCTGCAGACATCAGGGACCTGTAGTTAATGAAGTTGTCATAGCACCACTGAACCGACTCATGATCTGCAATATTAAAA-------------------AACATGAATCA--AAAATAAGTATTTTATCCAATTAGAATAAAACACCAAGTAACTGACTGATCAGTCAGATGAACC---AAGAAAAGATATCCATAACTTTTTTTTT ............:..............:..x..:...........:..:........:.x...x.....:..x..:....x..................:.....:.....x..:.......................:...................................:..............:.........:x..x:x..:..-------------------.x.........--x.x.:.:.x..x..x..:.....:..-...x::::.------.:.xx:..x..::.:..:....---...:.:.xx..:...:...x....:... 211M19D11M2D26M1I9M6I22M3D28M 249/307 81.1% 314/94230402 0.0% 31/307 10.1% 6561038 NA +53137 chr4 + 190214555 24537043 24537042 24540446 3404 ACACTTACTTTGTTTAAAAGCATGGTAGACGTTCAGCAGTGTCAGATGATCTCCATCTATGTGGGCAAATCTCATCTTGGCCTCATCTGCGGCTTTCTTGGCCTCCGTGGGGCGAACAAAACACTGTGGGACTAAACAAGGTTGGTATGGGCCCAACACAAACGCCCATATCGATGAGTCACGCATTCACAGATAGAGGAACAAGGCCTAGCTAGGTCAGTTCACAGAGCATAGGGCAGGGCAGGATGGCCTCCAACTGCATCTTGGATTGTTTACTACCTTGATTTGGTACATCAACACCTAACCACATCTGTAAGACAAGAGGGTTTCAAAGCTACAGAGTACCTGATTATTTTAACTAGATCTAAAAGTAGGCATCAAAACAGCTATTCTGAAGGCCATCAG-----------GATACTAAAAAGCTCAACTTATTTAA----AAAAACCAGTGCTGATAGCTCTACCAATAACCAG------AATAACGGTGTCAATTGCCTTTTAGCTAACTGTAATTTTTCAAAAGGGCATCCACTAAATCTACTGAATGGCTGTGAAAGTTAG----GAAGCTATGCTTGCCCACTGCAGAGCTAACAACAA----CTTTGAAACCAGTCTACTGCCATGTTTCTATCAGAATTTTTTCCCTAATACTGTGG----CTATTACCAACTGGTGGGTATCACTATTAGCACCGGTGAGCAGAAGCATATGTAAACATAAAAATATCAAGAATTCTTGGGTTTGGATGATAGCAGTAGTGGTGGAAGGTTAAACCG-CCTTTGA-ATTAAGAAAATTCAAAAAGGCTGGGATAT-------TCAGCCTAGTGTTTCAGC---------------------------------ATTTTAACAAAAGGATTAGAAAAT------------------------AAAGTCCCAAATTTAAAAAAGAAAAAAAACAAACTTATTTG-----AATCAAAACCTCAATATAAAAGCAAAGTCCAATATTTCAAAAGTTGACAATTAGTCTGAAACAATCATAT-----------CAAGGGTCATCAAGATATGTAACTACAGTTATTTGTTTAGAGCCTCA------ATATTAATTCACATAAAACTTTAAATTGTTACAAAGCATGTACT------ACATT--TTTTGAAA-------TACAA----------CTTTCCTTAATTCAGTTTAGCAATTCCATAGTCATAAAAGCAGTATGAAAATAAAAATACTTAACAGCTTGGGACTTTT-TCAACACATTTTAAAAGCTCTTAAAACCTTGTCAATGAAAAAATTCATAAATTATCGGTTCGGATAGAAGATAATGGGAATAA-TCAACAACAAGATAAAATACAGTATCATATTACTCTTTCCCATACAGTTTCCCCTTTAAAAAGATGCCAAAATAGCCAAATAGTGACAACAAAACATGATCATAATAAATATTAAAACTCTTGCTTAATTTAATTGAAGCAAGGTAATTCATAAAAGCACACAAACT-------TCTCACAGCTGTGAATTTTAATGTGAACTAGCCACTAGAGTTAAGTGGGAATAAATAAGTAGTGCTCTCAAAGGCCTCTAGATTTGCACTGTT--AGTATCAGGACCTCAAAACTTCA----AAAACTATTTTAATGTCAAACAAAGCATTACAA-----GCTCAGCAAACTA----TTTTTTATTCCCTGACTTCTTACTTGCCTCTTATTTCAACACTTTTCCTATAAATGG--ACCATTTAAAAACAGTCCATTTAC------ATTGCTGCACATAAATGCTCATTCTCCTGACAAACTAAAGG--TTTTTATTTGTAATAAATA-AAAATA----------AGTTTTTTTTAATTA--CAAATAAAACTGAGATG--TAGT-----TGGAAGATTACAACTAC-ATCACAACAACAAACTTCTTAAAGAGCTAATATTCTAAA-------------------CTCAAACAACAGTAATCA--TGTAAGTATATCTGATAAGAGAACCTAGAGAAATAAAAACTAGGCAGATAGACAAGTAAGTACACAATCCATTAGTTCTTGCC--CCACACTTTCTCTAAAAACTAAAATCT----TGGGAGAAGTACAACTGGGAGAATCTATAAAACAACATATAAGAAAGGCAGACAACAACCTACCACCACCTCCGCAAATGAAGCTACAATTTAATTAAAGTGACTC---AATACTGCCCTGCCCATCTGCTCTGAGTCTGATCAGTCATAACTCTGCAAGAAAACATTTTAGCTACTTCTTAAATAAAAAATTCACACCATTAGAATATACCATACGTCTAAACTAAGCCATAATTTTACATTTAAA----TTTTTTTCAATTTATCC--TTTAATTCCA-------CAGAATATTTTGAAATATTTGCAGCATTAAGTTCAATAAACCACTCAGCAATAGGGAGTCAGTTCTCTCCCGTGCTAAAACTAGTAGCAGAGAATATTTTAATCGTC-----AGTAAGAACTTATTTTCTATTTT--------TAGCTGTAAGAATAGCT---ATTCATTTG-----------------------TTTCTTAACAATATTTCTTCTCCTTTAGGGAAAATCTAATTT-CCAAGTTACTATTCATTTGTGGATTACATTTTATTGTTACTAAAAACAGCATTATTTCCTTAGCTTAATGGTCCAATTTTACA---AAATTAGCGATTTTATATATTAGGTATGTTTCTTTTACCAAGTTTTTCTACCATTGTA---AAAGAATACCATT----ATCAGATTAGATTTTAAGCCTAAAATTATACATTACTATTTCTATTTACTTGATATGAAGTTTGAAATTCATGTTTGTTCGGGTGCCATTGGAG-----TACATATATAGAA---------AAGGCTCAACTTAATGTATAGCTTTCAGTTTGTCACAGGCACACTTAATAGAGCTAAGTACTAGAGCAAAGTTCT----TCCTGTACTTGCAGTAAAAAACAAAAAACAAA----AAAACCACAAAGATAGCAGTGATGGACCTTTAACCAAAGAATTCAGTTACAACTGTGCTCAAACTTA--CTGCAATTTTTATTAGCACTCAAGAGAGCCAATGCTTTACTTATCTTTTGTGCACAATGACTTACTTTACTTTTGTAAGCACTATGTCATTACG----AAGCTATTTACAAGGTATTTAGAAAACAAAATTAATTCCTTAAAACCATCTATAAAATCCACTATCATACTAAAAATTAAAAAACAAAAACAAAAGTGAAGTCCACCCAAACTTTGAAGAGCTGGGCTTTTTTTTGTTCCTTTCCCT-CTATTACCTGACAACATAGCAGTAATAGATAGGACCTCATTAGAACAGTTGTAGTCACAACTTGCAATAACCATTTTTGCGAGCTGTGGATCTAGAGGAAACTCTGCCATCATGGATCCCAATTCAGTCAGATCTCCATCATCATTTAAAGCAGCCAGGTAATTCAAAAGTTCCAGGGCTCTCATCAGAGTTTCAGGAGCTAGTGGTAA-----AAGACAATCTATTAGACACGGTGCCTTAAGCAAGCAAAAATGTGACAAAGTACAAACTATTATAAGCAATCTCATTTTTCATTTTGCAGTGGACCAAACTCAAACTCAAACTGTCATCCAATTCAATTATACAGATC chr4 - 94230402 17974436 17974435 17977859 76252544 76252543 76255967 3424 ACACTTACTTTGTTTGAAAGCATGGTAGACATTCAGCAACGTCAAATGATCTCCATCAATGTGGGCAAACCTCATCTTGGCTTCATCTGCTGCTTTCTTTGCTTCCGTGGGACGAACAAAACACTGTGGGACTAAACAAGGTTGGTATGGGCCCAACACAAACGCCCATATCGATGAGTCACGCATTCACAGATAGAGGAACAAGGCCTAGCTAGGTCAGTTCACAGAGCATAGGGCAGGGCAGGATGGCCTCCAACTGCATCTTGGACTGTTTACTACCTTGATTTGGTACATCAACACCTAACCACATCTGTAAGACAAGAGGGTTTCAAAGCTACAGAGTACCTGATTATTTTAA-TAGAATTATACGTAGGCATCAAAATCTCTACTCTGAAGGCCATCAGTGTTACCTATATATACTGGAATTCTCAATAGATCTTGGTTCAAGGCCCAGTGCTGATAGCTCTACCAGGAACTAGTGTCATAATAAAGG-----AATACTTGAAATGCAAGTTTGCTTTCTCAAA---GCCTCTATCCTCTGCAGTGGATAAGAGCAGAAGGTAGTTTTGTAACTATGCTGCACTAACACAGTCTAAACAAGAATTAGCTTTATTACAAGTCTGCTACTAGA-------CAGAACAT----ACCAGTACAGTCAAGTCATCTTCCCAAC---ATGGTATTGTTATCAGCACTGGTATACAAAAGCATATGTGA--ATGAAAATATCAAGACTAA--AAGTAGTGATGGTAGCGGTAGTGGTGGAAGGTTAAACCGTCCTTTGACACTACTTGAAATAAAAA---TTGTGATGTGATGATCTCTGCCCACTGTTATACTCCCCAAAGTCTGATTTGGTTTTACTCTGAGTTGAATTTAAAAAATGGGTTTTAACATCCCCTTTCCAAGTACAGACCACTGAAGATCACGAATTAAGATTGCTACAATAA------TATTTGTGGTCTGTCAACATTCTTACAGGTTAGC-AATTTCAATAC-----GAATTTGCAATACATTCAAAGTAGTTATAGATCTTACTTTACAGAGATAAACAGGA---GAAAAAAAAGCAGTTTAAAGGAAGCCATACTGAAGATGtaatttta---aaaactttaaattttaatgaaattaatGCTGAAGAAGCATTAATTTTGCAGCTAACACTACAAATCATCCATTTTTTCCCCAGGACTACATAGCCTGCTCATAATT-TAAATCCAATCT-----CATCTGTCCCCAACAGATGAGAGCCTTTGTGTGTTCATTTTGAAATCCCATAAAATCCCAAGAACCACTACATTTCAGAAGTATA---TTGGATTGA--ATACTGGATGTAATTTCAGAAAAATGCAAACCGCAGTAGTGAATCACATGGTAACAAA-----------TCAGAAAG--TCTAATGCAG-TAAATAA-AACTGAAATGCAGGTACAAAGTAAATACCCCGTATTTTATGTCCTCTATTTGAAA-----------GCAAAA--ATATAGACTATTTTAGTTTCAAACACACTAATAAAAGTAAAAATCAG-TAATAGAG-TGAGTTGGAATAATTCACTGTTTTGATTAGTAGC------ACTTGCTCTATGGAAAAGTTAGGTATGTGAAATCCCATGGCAAGAC-------------AACAGAACTCTACAGTAACTTCTAAATGAACTACAACTTTTTAATCTGCTGATTTATTCTGTA---CTATTCTCTGCACTTTTCTGGTATCTAATTTTCATTTTAGTCCAAGCTATTAATACTTGGATTCCTATCTACATCCAGCCAATCTTTGCATGTACTTAAGGCATTATTATGTATGCTATCTACCAGATACTGCATCACTGGTTTTTGGAAAACAGTCCACAAAAACTGGGCTGTTTAGTCTTTATGTAGAGTTTTAGTTACTATCTCGACAGTAACCGGCTTCAAGC-CGAATGTTAAAAAAAGCATAGAAAAACATTACCTTAAAACAAAATAATGGGTTGTAAAAA------AAAAAAATGTCAATAGAAAGAGGAGCAAGACAAAT---CAACTGACTACAACAACCAAAAATACTAGTCTTCTAGATTTTCCTTTAGGAGCTGTTTCTGGGGTGGGTAGGGAAGAGCTGGGGG----------------CAAGAGAAAGACAGGCACCAACCTACCACCACCTCCGCAATTAAGCCTACCGTTAATTTAAAAAAAATCCAAGATTCTGCCCTGCCCATCTGCTCTGAGTCTGAACAATCATAACTCTGCAA-CAAACATTTTAGCTTGCTTTT---TAAAAACTT----TCATATGAATATACTGTAAGACTTAACCAAAGCA-GATTTTAAACTCGGATTATTTTTTTTCTAATTGTCCAAGTTAAGCACATAACCAGCAGTATAACTGCAAAG------AGCCT---GTTAAATAACACACCC-----TAAAGACACA------------GCGATAATTATGAATACAGAACATCCTGACTTTCCTAAGAACAAAATCTTGCTGCTTGTCCTAGAGAGACCAACTCTAAAATGAAGTCAGATCTATGTAAACTGGGCAATGAGATGCAAGGCTTGCTTGACAACATTTTTCTCTC-------AAGATCTCTCTCGACAAGCAGCTAT--------------------------------GACAGGGCTATTCACTTTATGCAA-AGTACAGCTGTGCACACAAATTAACTATTAAAAATAT---ACACCCTCCCCCAAACTTGCTTTCTTTCCTTTAGAAGTAATGAATGCTCTTTAGCTTCCCAATAAAATTAATGACTAAAAAAAATCA-------TACCATGTACAAGCTTAGCAGTTCAGTA-TAATTTGTGCTCTAATTCTTTTGGAAATACTGGCATGTATCAAAGTGCAGAAGAATGCACAG--TAGAGAATAGATTTCACTGCCTTAGAAGCA--------------GAGCAGTTGAGCCGACATTTTTAGTCCTG-------ATTATGAAACTAAGAATAGATTTCCATCCCACTAGACTG--------AAATTTTCTACTGACTCAAACAAATGCATTTTAGCTAAAAGTTAGTCAGAAAGTTTGATCC-TATCTATGCACGTTGA----TTTCTTAACATTAATG----ATTATTTGCTGCAGGTCTAAAAGCA--AACCCATAATGGATTAAATTTCTGACAAAGCAGTTTTTATTAAAAATCA----CTTCAGATTGCTTATG------TTTTTGATGTGGAAAGCTCA-----------------GAACTTCCCCCAGAC--TGAAGATTT--GCACTTTGGTATCCCTTTCCTTAATATTACCTGACAACATGGCAGTAATAGATAGGACCTCGTTAGAGCAGTTGTAGTCACAACTTGCAATAACCATTTTAGCCAGTTGTGGGTCCAGTGGAAATTCAGCCATCATGGACCCCAACTCCGTCAAGTCTCCATCATCATTTAAAGCAGCCAGATAATTCAAGAGCTCTAAGGCTCTCATGAGAGTTTCAGGAGCTGAAAGAAATATTTAGGTAGTTATATTAATCAAAGTGCTATTAATAAGCAAGAACAAG--AATGTACAAATAACTGT-----TTTTCACTCTCCATTCAGCTGGCTTCCAAACACA-----AAATTGTTACCAAATCCAATTAGACACACC ...............:..............:.......::....:............x...........:...........:........x........x..:........:............................................................................................................................................................:.........................................................................................-....x:..x.x.............:xx...:...............-----------x.....::..xx.....:xx..:.x:----..::x.....................:x...:..------.....x..-----.x.:.:.xxx.xx:..x.x.:x...:.....---..x..:.::xxx.x:.x..:..::xx.:::...x...----.x.:.......xxx.:.x::...xx:x.....x..----....:xx..x.....:..:.:.x:-------.....:x.----x.:.:...x..x:----x.x..x.....---xx.....:::...:.....:...:x:..:..........:.--..:............x.xx--::..xxx....:....:......................-.......-.:..xxx:..x.x....---:..x...:.-------..x...:.x....x:.x:---------------------------------.x.....x...x..:..xx..x..------------------------..::..x.:....x.:.xx:xx.x..x..------......-----x:....x.::::x.:.x:xx...-..x.:.....:-----:.:..x:....xx:.:::..::.:.:...x-----------..::.:.x.x..:..---.x..xx.x..:x:...:xxx::....x:.------..:.x.x..:.---.............x.x.::..::xx:.:..------:....--.....x.:-------.....----------:.....::.:xx.x::x....xxx::....:.:-....xx..:.x.-----:.xxx:.x.::.....x.x:.::.:...-.xx::x......:...x.:.x.....:.:::xx..:x.xx.x...:xx:..x...x---.:....x..--...x...:x:...-.:x.x..x..x::...x::.....x::x..:..x:xx.xx..x.-----------.:.:....--x.:..x::..-:.....:-:..x:x..x:..x.xx..x.:......::xx:xx.:..::x.xx.:..x.....:-----------::....--.:.:.:...-------.:...x.xx:::x...xxx.:.:x:..::..-:.x.....-.:...x.......x.x.x.:x.x:xx.:.:x:..------.:....x..:.x--.:x:.:...xx:x::...:::..----..:..-------------....:.:.x:....:-----x..x.:::.....----.....x..::x....:..x..x:x.:---..xx.:..x:........:x:..xx.::--x:.....x.:xx..:x.:...x.:------...x..::x:.:.xx::x:..x...::xx.::x...x....--..x....x.:.:x..xx..-x.:...----------:......xxx..x:.--.x.xx.......:.x..--....-----..x.:::..x:.::...-...x.:...::..x.xx...x...x-.x...:..xx...-------------------..:...xx.x.:....x:--.....:x.------.x..:.:x::.x.x.....x.::.:.x..:..:..---...x.:.x....xx.x...xx.:.x..x.:.--.:.x.:....::.x.::.x:x:xx...----....x:::.x.x.:.....:.----------------:.x:......:...:..x......................x.:.:x....x:..x.x.....:x:.x..---:..x............................x..:..............-x.............xx:.:..---......x..----:...xx........::..x.x..x...:..:x..-:......x.:.:::.----........x.x..:...--x....x:x..-------...x...x:.xx...x------...x.---...x.....xx...:.-----..::..xx..------------..x.x..:..xx.::.x....:..::.:.::x..-----.::..:.x...::.x::.:.::.--------:.:..x...:.xx.:x.---..::..x.:-----------------------..x...:....:....:.::::.-------..:....xx:.:-x....:x:....--------------------------------:....x::....:x...x::x:..-:..x..::.x.:..---......:.x...xx.x....---::.:x:.:.:::x.x.xx.:...::.x..x..:x.---..x....:.:x..----x..xx.x..:.x..x.x.x......xx.xx..-------.x.:..x...xx.x.xx.x....:::x.-.x..x.x..:..x::.x.:x.....:-----x:...:...x:..---------..x..x..:--..:x.x....x.....x.x:x.:.x.:...--------------:..:.x.x....x:.xx.:.----.....-------.x..x:....x..:..:.:.----x.xx....x.::x.:--------::.::..:x..::.xxx.xx..:x.:..x:.xx...x...x...--.x.x..x...x..:x-:.:::.x.x:x.:::.----..x....x.x..x:..----..x.:..:..x:.xx.:.:x.....--.xx:...x.:.----..::.x:.x....:.:.x..xxx.xxx.....:.----...x.:.:::::...:------x:.x.x..::x:...::.x.-----------------...x.:.x....:..--......x:.--..x:...xx.:.:.......:.-x................:....................:.....:................................x..x..:.....:..:..x.....:..x...........:.....:..x....::..........................:........:..:..:.:.........x...............::x:.x..-----.:.xx:x.x.....:x..x:....:x.x.::......:..::x.--..x.......:x.:.:.-----x.:...:.:.:....:x..x.xxxx......x..-----...:...:.:.x...:......x...x.:. 358M1D46M11I26M4I34M6I8M5D31M3D37M4I35M4I24M7D8M4D13M4I11M3D41M2D19M2D39M1I7M1I17M3D9M7I18M33I24M24I29M6D6M5I23M1D11M5D30M11I15M3D29M6I11M3D30M6I5M2I8M7I5M10I33M1D12M5D28M1I56M3D9M2D13M1I44M11D8M2D10M1D7M1D55M11D6M2D9M7I31M1D8M1D34M6D12M2I23M4I5M13D15M5I13M4I26M3D28M2I24M6I41M2I19M1I6M10I15M2I17M2I4M5I17M1I25M1D13M19I18M2I8M6D35M3D31M2I27M4I21M16D69M3I50M1D21M3D9M4D34M1D15M4I17M2I10M7I16M6D5M3D16M5D10M12D34M5I23M8I17M3I9M23I23M7D12M1I12M32D24M1D14M3I20M3D35M3I13M4I32M7D28M1D26M5I13M9I9M2D30M14D20M4I5M7D20M4I15M8D44M2I15M1D16M4D16M4D25M2D11M4I34M4D16M6D20M17D15M2D9M2D22M1I209M5I44M2D17M5D34M5D30M 2088/3096 67.4% 3424/94230402 0.0% 636/3096 20.5% 6562607 NA +8603 chr4 + 190214555 24540836 24540835 24540971 136 ATACCTGGTGGATCCATAAAATCAAAATGTACCAAGTCATCAATACCAAGTTTCTTCAATTGTAACACAACTGATCCTAAATTAGAACGCAAAATCTCAGGATAGGTGTTATCCTA--GCAAAGAACAAAAACATTTA chr4 - 94230402 17978810 17978809 17978947 76251456 76251455 76251593 138 ATACCTGGAGGATCCATAAAATCAAAGTGCACCAAATCATCTATACCAAGCTTCTTGAGCTGCAACACTACAGATCCTAAGTTAGACCTCAAAATCTCAGGGTATGTGTTATCCTAAGGGAAGGAAAAAGAAAATTTA ........x.................:..:.....:.....x........:.....x.::..:.....x..x........:.....x.x............:..x...........--.x..:...x..:..x..... 116M2I20M 114/136 83.8% 138/94230402 0.0% 2/136 1.5% 6562026 NA +10921 chr4 + 190214555 24541870 24541869 24542049 180 TACCTGCATTTCTGTTTTATAAGCTTTCTCTGTGTAAAGTCTGAAGCATTTTCCAGGTCTGGTACGTCCAGCTCGACCAGCCCTTTGCTGAGCTGAAGCTTTACTAATAGCTGTCACCAAAAGGGACTCAACTCTGATTCGAGGATTGTAGACCTATTG-GAATTGAAATAACACAAGAGT chr4 - 94230402 17979069 17979068 17979249 76251154 76251153 76251334 181 TACCTGCATTTCAGTTTTGTAAGCCTTCTCTGTGTACAGCCTGAAGCACTTGCCTGGTCTAGTACGACCAGCACGGCCAGCTCGCTGCTGAGCAGAAGCTTTACTAATTGCAGTCACCAAGAGAGACTCCACTCTGATACGAGGATTATATACCTATTTCAAAGTGGAATAGGAGATGAAT ............x.....:.....:...........x..:........:..x..x.....:.....x.....x..:.....:.x:........x..............x..x........:..:.....x........x........:..x.......x-:..x..:....:x.x.x..:. 159M1I21M 147/180 81.7% 181/94230402 0.0% 1/180 0.6% 6562801 NA +7900 chr4 + 190214555 24542933 24542932 24543049 117 TATGTACCTTCTGTTTCGCAAATCCAGGATCAATCACAAACACCACACCATCTATTGTCAAAGACGTCTCTGCTATGTTAGTTGACACAACTACCTGTTAAGAAATAGAGTATATAA chr4 - 94230402 17980621 17980620 17980737 76249666 76249665 76249782 117 TATTTACCTTTTGTTTTGCAAAGCCAGGATCAATCACAAACACAACACCATCTATTGTTAATGACGTCTCAGCAATGTTAGTGGACACAACAACCTGTTGAAAAATAAAACAGCTAA ...x......:.....:.....x....................x..............:..x........x..x........x........x.......:.:.....:.::.xx... 117M 99/117 84.6% 117/94230402 0.0% 0/117 0.0% 6562312 NA +3060 chr4 + 190214555 24547872 24547871 24547960 89 TCTCTCTCTCTCTCTCTCTATGTATGTATGTGTATATATATATATATATATATATATATATATATATATATCTATATCTATATCTATAT chr4 - 94230402 15725426 15725425 15725514 78504889 78504888 78504977 89 TCTACCTACCTTTCTCTCCACATAATTCTGTGTACACATGTATATCTGCATATATGAAAGTATCACTGTATTTTTATATATGTATGCAT ...x:..x:..:......:.::..xx.x......:.:..:.....x.::......:x.x:...xxx.:...:.x...x...:.x.::.. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 8822446 NA +32834 chr4 + 190214555 24548851 24548850 24549541 691 TTACCTTTCTTCCAATTGCTCCATTCTGTTTTTTGGGAGGTGGAGGCTCAAAAATGCGTTGCTGCTGCTGAGGTGGAAGTGTAGAATACAATGGAATGATTTTAATGTCACCAACTTCAGGGCCCAAATCATCAACTTCACGCTTTATTCTCTTACAGGCTTCATCAATTTCCTACAAAATAAAA---GTGAGTCTAAAAAC-------GAATACTGAAACATTTT------AAAGTATTTATTATAATC---CTAGTTCTATGCAGTCTGTTTTATGTATGCCATCTTCTTTCACTTCATGGATACCCTGTTTTCAATTTAGTAACCAAAACTAA------------TTTAGCAAATTTC-AATGGGATTTCCAAAACAATCCAAGAAACTTTCATTTTT---GTATTCAAATGAATATATAACTGCCTTATTTGCATTCCACACCCCTTTTCTTAGAGTCAGATTTCCTAATTAATTCTCAACAAATTGTACTAAAATTGAAATTTCTCACTCAGGAATATTTAAATGCACTCACGACCTTTTCAATTTTCACAATCTAAAAGAAATTGATGTGCTAGACATTTTAAATAAGCCAATTAGGCTTTAATGTCACGTATCACTAATGCAATTATATGGAAGATTTGCTTCATTGTGCCTAATGAGAACAAACACCTTTACAGTATCAACACAGATATTTAAGAACTAGGCTAACCCAAATGTCTTA chr4 - 94230402 17985057 17985056 17985737 76244666 76244665 76245346 681 TTACCTTTCTTCCTATTGCTCCGTTTTGTTTTTTTGGTGGGGGAGGTTCAAAAATCCTCTGTTGTTGCTGAGGAGGAAGGGTAGAATACAATGGAATGATTTTGATGTCACCCACTTCAGGACCTAAGTCATCAATTTCACGTTTTATCCTCTTGCAGGCTTCATCAATCTCCTGCAAAACAAGAACAGTGGTTAAAAGAACTCCATAGGAAAGTTAATCCATTCTCTGTTAGAACAACTCATCACAATTGCACTAAGTCTATAC-------CTAGAAAAAAAAAATTACAATAACTTCAC------------------TTAATAA--AAAACAAAAAATCCTAGGTGCTTGCCAAATTTCCAGTTAAATTTTCATGAAGCTCTGAGATGCCTCAGCTTCTTCCATACTCTAATGAACA-------GCCTCATTTGCATGCAACATCTTTTTTCTTTTAGTCATGTTTCCTAATTAATTCTCTACAAATTGTACTAAAATTGAAATCTCTCACCCTGGAATATTAAACTGCACTCATGACCTTTTCAATTTTCACAATCTAAAAGAAATTGATGTGCAAGATATTTAAAATAAGCCAATTAAGCTTCAATGTCACGTATCACTAATGCAATTATATGGAAGATTTGCTTCATTGTACCTAACGAGAACAAACACCTTTACAGTATAAACACGGATGCT-----------CTGAACCAAACCTCTTA .............x........:..:........x..x..x.....:........x.x:..:..:........x.....x.......................:........x........:..:..:.......:......:.....:.....:..............:....:.....:..:.---...:x.xx..:...-------...x::.:.xx....:.------:..xx.:.:..:.:...:---...:x.....:.-------:.x:x:x.x:xx.x:.x.xx.x......:------------------...:...--.....x..------------:..:x........-.:.x::....:..x:.x:x..::...x:.:.:x::..:.---:..:..x......:.-------....:........x.x...:.::.......xx.....x:.................x.......................:......:.x........x..x........:........................................x...:....x..............:....:................................................:.....:.......................x.....:...::.-----------..:.x.....:x..... 185M3I14M7I17M6I18M3I12M7D29M18D7M2D8M12I13M1I39M3I15M7D272M11D17M 518/646 80.2% 681/94230402 0.0% 80/646 12.4% 6563794 NA +17061 chr4 + 190214555 24554663 24554662 24554960 298 GGTTGCTGCATATTAGAAACAGTATGTCAAAAGCTAAATAATGAAGAAAATTAAAACAATACCTCTTGACCAGTTAAGAAAAGAAGAAGATCTCCCTCTTCCTCTTCACACATATGAATCTGGATAACTGTTCGAATTGCTGCTTCAAGATAATCTCTCTCTGGTTCTGGAGTATAGAAGATCTCAACAGGATGTGTACGCCCAGGAATAGTTAGGAGAGGACAGTTATCAAAGTAAATCTGGAATTTTCCTGCATCTAGAGTAGCGCTCATAACTATAACCTGAAAGA--AAACAGTAA chr4 - 94230402 17994252 17994251 17994533 76235870 76235869 76236151 282 GGTTTCTGCATA----AAATAATGTGCAGAAA-----------AAGGAAA---AAAAAATACCTCCTGTCCAGTAAGAAAGAGTAGAAGATCTCCTTCTTCCTCTTCACACATGTGAATCTGGATCACTGTTCGAATGGCAGCCTCAAGGTAATCCCTTTCTGGTTCTGGAGTATAGAATATCTCCACAGGATGGGTGCGACCCGGAATAGTTAGTAGAGGGCAGTTATCAAAGTAGATCTGAAACTTGCCAGCATCTAAAGTAGCACTCATAACTATAACCTGTAGGATTAGACAACAA ....x.......----...:.:.:..:x:...-----------...:...---...x........:..x.....x.::..:..x...........:.................:...........x...........x..x..:.....:.....:..:....................x.....x........x..:..x..x...........x.....:..............:.....:..:..x..x.......:......:.................x.:..--.:...::.. 12M4D16M11D7M3D236M2I9M 235/280 83.9% 282/94230402 0.0% 20/280 7.1% 6560411 NA +17031 chr4 + 190214555 24554663 24554662 24554960 298 GGTTGCTGCATATTAGAAACAGTATGTCAAAAGCTAAATAATGAAGAAAATTAAAACAATACCTCTTGACCAGTTAAGAAAAGAAGAAGATCTCCCTCTTCCTCTTCACACATATGAATCTGGATAACTGTTCGAATTGCTGCTTCAAGATAATCTCTCTCTGGTTCTGGAGTATAGAAGATCTCAACAGGATGTGTACGCCCAGGAATAGTTAGGAGAGGACAGTTATCAAAGTAAATCTGGAATTTTCCTGCATCTAGAGTAGCGCTCATAACTATAACCTGAAAGA--AAACAGTAA chr4 - 94230402 17997602 17997601 17997883 76232520 76232519 76232801 282 GGTTTCTGCAT----GAAATAACGTGCAGAAA-----------AAGGAAA---AAAAAATACCTCCTGTCCAGTAAGAAAGAGTAGAAGATCTCCTTCTTCCTCTTCACACATGTGAATCTGGATCACTGTTCGAATGGCAGCCTCAAGGTAATCCCTTTCTGGTTCTGGAGTATAGAATATCTCCACAGGATGGGTGCGACCCGGAATAGTTAGAAGAGGGCAGTTATCAAAGTAGATCTGAAACTTGCCAGCATCTAAAGTAGCACTCATAACTATAACCTGTAGGATTAGACAACAA ....x......----....:.:::..:x:...-----------...:...---...x........:..x.....x.::..:..x...........:.................:...........x...........x..x..:.....:.....:..:....................x.....x........x..:..x..x...........:.....:..............:.....:..:..x..x.......:......:.................x.:..--.:...::.. 11M4D17M11D7M3D236M2I9M 234/280 83.6% 282/94230402 0.0% 20/280 7.1% 6557061 NA +13229 chr4 + 190214555 24556154 24556153 24556412 259 TGATTTCTTACAGTTGGTTATTGATCAGTATGTATTCCCCATTTTTATGCCCACATACACACAT-----ATATAGTTAAATGGAGAGAAGAAATTACT---------------TCACCTTTAAATCTGATCTCTGTCTTACAACTTCCTTCAGAACACCCATTAGAATATCTGTAGCCAGTGTCCTCTCATGAGCCTCATCAAGAATTATTACACCATAACGCTCCAGGAGGGGATCATTCATAGCTTCACGAAGTAACATCCCATCAGTCATATACCT chr4 - 94230402 17998165 17998164 17998442 76231961 76231960 76232238 278 TGATCTATGTCAGTTGATTATTTTTCTTTATA-ATTAGCTAGTGGTAAACACACAGACACTCTTCCTCAGCGTGACTAAATACAAAGGAGATGTTGCTAGGCTTCATGATTACTGACCTTCAGATCAGCTCTCTGTCTTACAACTTCTTTCAAAACTCCCATTAAAATATCCGTAGCCAGTGTTCTCTCATGGGCCTCATCAAGAATTATAACGCCATAGCGCTCCAGCAAAGGATCATTCATTGCTTCACGAAGTAACATACCATCAGTCATATACCT ....:.x.xx......:.....xx..xx...:-...xx.:.x.xx..x:.x....x....x.x.-----:::.:::.....:x.:..:...x:..:..---------------.x.....:.:...x.x..................:....:...x.......:......:...........:........:.................x..:.....:........x.::...........x.................x................. 32M1D31M5I29M15I166M 203/258 78.7% 278/94230402 0.0% 21/258 8.1% 6557989 NA +13257 chr4 + 190214555 24556154 24556153 24556416 263 TGATTTCTTACAGTTGGTTATTGATCAGTATGTATTCCCCATTTTTATGCCCACATACACACAT-----ATATAGTTAAATGGAGAGAAGAAATTACT---------------TCACCTTTAAATCTGATCTCTGTCTTACAACTTCCTTCAGAACACCCATTAGAATATCTGTAGCCAGTGTCCTCTCATGAGCCTCATCAAGAATTATTACACCATAACGCTCCAGGAGGGGATCATTCATAGCTTCACGAAGTAACATCCCATCAGTCATATACCTATAT chr4 - 94230402 17994821 17994820 17995102 76235301 76235300 76235582 282 TGATCTATGTCAGTTGATTATTTTTCTTTATA-ATTAGCTAGTGGTAAACACACAGACACTCTTCCTCAGCGTGACTAAATACAAAGGAGATGTTGCTAGGCTTCATGATTACTGACCTTCAGATCAGCTCTCTGTCTTACAACTTCTTTCAAAACTCCCATTAAAATATCCGTAGCCAGTGTTCTCTCATGGGCCTCATCAAGAATTATAACGCCATAGCGCTCCAGCAAAGGATCATTCATTGCTTCACGAAGTAACATACCATCAGTCATATACCTGAAT ....:.x.xx......:.....xx..xx...:-...xx.:.x.xx..x:.x....x....x.x.-----:::.:::.....:x.:..:...x:..:..---------------.x.....:.:...x.x..................:....:...x.......:......:...........:........:.................x..:.....:........x.::...........x.................x.................:x.. 32M1D31M5I29M15I170M 205/262 78.2% 282/94230402 0.0% 21/262 8.0% 6561333 NA +16334 chr4 + 190214555 24570647 24570646 24570858 212 TACTTACTTAAGAATGGTTTTTGCACTACTGCAGTCTTCAAATCGAATGGAGTAACCAACTTCCTGGCCCAACATCACATCCATCTCATCAGCAACTCTCTGAGCCACACTCATTGCAGCCACTCTCCTGGGTTGGGTACAGGCAACTCCTCTCTTGGGTCCTGGTAATGATCGCATGTACTCCACACACCACTGTGGAATCTATCAAATAA chr4 - 94230402 17999232 17999231 17999443 76230960 76230959 76231171 212 TACTTACTTGAGAATAGTTTTTGCACTACTGCAGTCTTCAAATCGAATGGAGTAACCAACCTCCTGGCCCAGCATTACATCCATCTCATCAGCAACCCTCTGCGCCACACTCATTGCAGCCACTCTCCTCGGCTGGGTACATGCTACTCCCCTCTTTGGTCCAGGCAATGAGCGCATGTAGTCAACACACCACTGAGGGATCTGTCAAGAAA .........:.....:............................................:..........:...:....................:.....x..........................x..:........x..x.....:.....x.....x..:.....x........x..x...........x..:....:....:x.. 212M 189/212 89.2% 212/94230402 0.0% 0/212 0.0% 6571415 NA +16334 chr4 + 190214555 24570647 24570646 24570858 212 TACTTACTTAAGAATGGTTTTTGCACTACTGCAGTCTTCAAATCGAATGGAGTAACCAACTTCCTGGCCCAACATCACATCCATCTCATCAGCAACTCTCTGAGCCACACTCATTGCAGCCACTCTCCTGGGTTGGGTACAGGCAACTCCTCTCTTGGGTCCTGGTAATGATCGCATGTACTCCACACACCACTGTGGAATCTATCAAATAA chr4 - 94230402 17995887 17995886 17996098 76234305 76234304 76234516 212 TACTTACTTGAGAATAGTTTTTGCACTACTGCAGTCTTCAAATCGAATGGAGTAACCAACCTCCTGGCCCAGCATTACATCCATCTCATCAGCAACCCTCTGCGCCACACTCATTGCAGCCACTCTCCTCGGCTGGGTACATGCTACTCCCCTCTTTGGTCCAGGCAATGAGCGCATGTAGTCAACACACCACTGAGGGATCTGTCAAGAAA .........:.....:............................................:..........:...:....................:.....x..........................x..:........x..x.....:.....x.....x..:.....x........x..x...........x..:....:....:x.. 212M 189/212 89.2% 212/94230402 0.0% 0/212 0.0% 6574760 NA +18989 chr4 + 190214555 24576059 24576058 24576723 665 AGGGGAGAGGTATTCTCTATAGGATTTCCACTCTGAAATTCAGAGTGCCAATTAAACAT----CAAATCAGCTAT--------TCTTCAAGATGTTCTATAGGACAGACAAGGGAAATGACCACCAGAAT------CAAATATGCAAC-------ATTTGGTAAAC---TTAAACATAAATGAAATATGTACCATGGTATACAATAACTCACCTGTGTTGTTTTACCAGACCCAGTCTCACCAACCAGTACAAAGGACTGATGTCTAACCAGAATATCTGTAAACCTATCCTTGTATTCCCAAACAGGGAGCTGAAGACGTTTCTTTAGAATATCATAGTATCGAGGAGTATGGGGTAAGTTGGTGAACGGATTAATGCACTGTGGAAGTGACGTGTGACCTGCATGTCCGGCATGCGTTGAATGAGCAGAATGTGTTGAATGCGTTGAATGTGCTGAGTGGGTTGAGTGAGCTGAATGGGAAGCTTTCAAAGGTGGTAATCCAGCACTGATAAGCATAGCATTTGTTGAAGCTCGCAACTCCTTCTCCTTTTCTTTCTCCCTCTCTCGCTCTCTATCTCCTCTATCACGTTCTCGGTCTCGATCTTTAGACCGATCTTCACGATCCCGGTCTCGATCTCGATCCTTCCTAAA--------------AACAAAAATTTAGA-ATTCAGAT-TCTGAATTTTATGCAGAA chr4 - 94230402 18003249 18003248 18003839 76226564 76226563 76227154 591 AGGTGAAAGAT-TTTTCTCAAGTACTTCTGC------ATTCATTAAGCAAATCAAACATTCATCAAGTAAGTTTTGCTAGTTATTTATGAGATGTTTTGCAT-------------AATGACTTTCAAGATACCAAGTAAAGATTCAACCCCCACTACTTAGCAACCATCTCAAACTTTAAGAACTCA---ACCATTGTGTA--AGAACTTACCTGTGTTGTTTTACCAGACCCAGTCTCTCCAACCAGCACAAATGACTGATGCCTAATCAAAATATCCGTGAATCTTTCTTTATATTCCCAGACAGGAAGCTGTAGTCGTTTCTTCAGTATGTCATAATAACGAGGCGTATGTGGTAGATTTGTGAAAGGGTTAATACTGTGTGGAA--------------TCAT----------------------------------------------TGCTGG---------------------------TTTCATAGGTGGTAACCCAGCAGCAATGAGCGTAGAGTTAGATGCAGCTCGCAACTCCTTTTCCTTCtccctttctctgtcacgatctctat---ctctgtcacgatccctgtcacgatcttt---ccggtcatcacggtccctgtctcggtcACGATCCTTCCTAAAATGAGTTAGGAAACAGCAAAAAATTAGACACTTGGATATTTAAATGTTATGAAGAA ...x..:..:.-..:...xx..x.:...::.------.....xx:x..x...:......----...:.x..:.x.--------.:.x::.......:.::.x-------------......:x:..::..------:...x..x....-------.:..:.:..x.---.:....x.x..x:.xx:.---.....x..:..--.x....:.............................x........:.....x........:....:..:......:..:..:..x..:..:........:.....:.....x..x........:..x..:.....:..x.....x.....x....::..x.....x..:.....:.xx.......--------------x...----------------------------------------------.....:---------------------------.....x.........:......x::..:...:...x:..x.x..x...............:.....:..::.:..:..x..x..x.......---....:.....x..:.x...x........---...:..x.....:....x......:..x..............--------------.:......x.....-.:.::...-.:.:...x.....x.... 11M1D19M6D22M4I12M8I19M13D15M6I12M7I11M3I18M3D11M2D185M14D4M46D6M27D92M3D28M3D42M14I14M1I8M1I18M 421/547 77.0% 591/94230402 0.0% 162/547 29.6% 6572810 NA +3299 chr4 + 190214555 24596067 24596066 24596130 64 CATAGCAAGAC-----CCAGTTTCTATCTGGAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAA chr4 - 94230402 89377139 89377138 89377207 4853196 4853195 4853264 69 CATAGGAGGACTCCATCCATTTTCTTTTTGGAAAAAAAGAAAAAAAGAAAAAAAAGTAACAACAACAAA .....x.:...-----...x.....x.:..........:...........:.....x..x:.x..x... 11M5I53M 52/64 81.2% 69/94230402 0.0% 5/64 7.8% -64781072 -29449330 +3227 chr4 + 190214555 24596081 24596080 24596136 56 GTTTCTATCTGGAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAAAAAAGA chr4 - 94230402 32752682 32752681 32752737 61477666 61477665 61477721 56 GTTTTTATATGGTACAAAACCAGCAAAGCAAGGAAAGAAAAAAAAAAAAAAAAAGA ....:...x...x.x....xx.:x....x...:........:.............. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -8156601 -86073801 +3082 chr4 + 190214555 24609830 24609829 24609887 58 TGCTTGTTTTTTGGAGTTTTTTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTGA chr4 - 94230402 60841728 60841727 60841785 33388618 33388617 33388675 58 TACGTATATTTTGTTGTTTTGCTTATTGTGTTTTGTTGTTGTTTGTTAATTTGTTTGA .:.x.:.x.....xx.....x:..:..x.........x.........x:......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -36231898 -57998504 +3058 chr4 + 190214555 24635264 24635263 24635329 66 AACAAAAAACAGAAAACAAAAAAACCTGAAACTTCCATACAGAAAAAAGAAAAAGCTCCCAAAAAA chr4 - 94230402 2725163 2725162 2725228 91505175 91505174 91505240 66 AACAAAAAAAAAAAAACAAAAAAACCCAAAACTCTAAAAAACAAAAGAAGATGAGATCCTGTAAAA .........x.:..............::.....::x.x.x.x....:.::.x:..x...::x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 21910101 NA +3654 chr4 + 190214555 24645801 24645800 24645905 105 TGACAAGGTG---ACTTCTTATTATCCCTATTCTACAGATGAGGGAATTGAGACTCAGAGAAATTAAGTAACTAGGTCAAGGTCCTCCAGCTGGTGGGTCATGGAGTT chr4 - 94230402 15193202 15193201 15193309 79037094 79037093 79037201 108 TGGAAAGGTGGAAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATT ..:x......---.x.:x.....x...x:...:..:.xx..::........:.......x....x..:.....xxx::......x.x.....x..x:.xx..::.:.. 10M3I95M 72/105 68.6% 108/94230402 0.0% 3/105 2.9% 9452599 NA +3182 chr4 + 190214555 24654021 24654020 24654071 51 TTTTCTTTCTGTTTGTTTGTTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 11653751 11653750 11653801 82576602 82576601 82576652 51 TTATCCCTCTGCTTGTTTGGGTTGCTTTTTTGTTGTTTTTTTTTTTTTTTT ..x..::....:.......xx....:.....x..x................ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 13000270 NA +3232 chr4 + 190214555 24654027 24654026 24654072 46 TTCTGTTTGTTTGTTTTGCCTTTTTTTTTT-----TTTTTTTTTTTTTTTT chr4 - 94230402 24514036 24514035 24514086 69716317 69716316 69716367 51 TTTTGTTTGTTTGTTTTGCTTTTTTTTTTTGAGGGTGTTTTTTTTTTTTTT ..:................:..........-----.x.............. 30M5I16M 43/46 93.5% 51/94230402 0.0% 5/46 10.9% 139991 NA +3071 chr4 + 190214555 24655289 24655288 24655338 50 AAAGTTGTTTTTTTTTGTTTGTTTGTTTTTTTTTTTGGTTGTTAAAAGAC chr4 - 94230402 29803684 29803683 29803733 64426670 64426669 64426719 50 AATATTGCATTTTTTTGTTTGTTTGTTTGTTTTTGTGGTCATTAAAACAC ..x:...:x...................x.....x....::......x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -5148395 -89082007 +3189 chr4 + 190214555 24656049 24656048 24656104 56 TCTCCAAAAAAAAAAAAAAAAAAAAAAAAGGAGGGGGGTGGATGAAAGAATAAAAA chr4 - 94230402 88558242 88558241 88558297 5672106 5672105 5672161 56 TCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAA ....x....:.x...................:x.....x..:x.x.....x.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -63902193 -30328209 +3178 chr4 + 190214555 24656054 24656053 24656123 70 AAAAAAAAAAAAAAAAAAAAAAAAGGAGGGGGGTGGATGAAAGAATAAAAAGG-----AAGACTGCAGATGGTTT chr4 - 94230402 40472548 40472547 40472622 53757781 53757780 53757855 75 AAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAATTT ......:.......::.................x..:x.:::..x.x..:...-----....:x.x...x::... 53M5I17M 52/70 74.3% 75/94230402 0.0% 5/70 7.1% -15816494 -78413908 +3463 chr4 + 190214555 24658597 24658596 24658778 182 TTTTCCTTTGCTGCATGTGCTGTGATATTTTTCTCTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTT chr4 - 94230402 94205215 94205214 94205384 25019 25018 25188 170 tttttctttgtctcat-----------tcttcttctAAATACTTCCCTAATTCTTTTTCTCTTTCTAATTCGTTTTACTTTTCTACATACTTTTCCAATTCTTTTTCCAATTCCTTTACTAATTCTATGTC-TTCTTTACTTAATAATTCTTTACCTATTTTTTTCCAATTCTAATTATTTT ....:.....::x...-----------.:..::...xxx.:::.....xx..............:.xx...x..:.x::.....x:x.x:..:.::xx......:.::xx...:..:x:.xx....x.x..-......x:..xx.xx...:..x.:.x:...:..:.xx.:..xx..x:... 16M11D104M1D50M 104/170 61.2% 170/94230402 0.0% 12/170 7.1% -69546618 -24683784 +4301 chr4 + 190214555 24658602 24658601 24658796 195 CTTTGCTGCATGTGCTGTGATATTTTTCTCTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTT---TTTTCTTTCTTT---------CTTTCTTTCCTTCT chr4 - 94230402 79478374 79478373 79478574 14751829 14751828 14752029 201 CTTTGGTGTTGCTATTGCAATGTTTCCCTTTTT-TGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACT-----TCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTTTATATTGCCAGAGGTTTTCTTACTTTCT .....x..:xxx.::..::..:...::..:...-..........xx.:..x:...:x:...::x...::.:......:.xx.:..:::.:.::....x:....x.x.:..x:....x:x..-----.:..:x:..:...:..::x..x...:xx...x......::x..---.:.:....x.x.---------:......x.:.... 33M1D87M5D43M3I12M9I14M 118/189 62.4% 201/94230402 0.0% 18/189 9.5% -54819772 -39410630 +3904 chr4 + 190214555 24658622 24658621 24658786 165 TATTTTTCTCTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCT--TTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTCTTTCTTTCTTTCT-----TTTTTCCTTCCTTCCTTCCTTTCTTTCTT-TCCTTTTTTCTTTCTTTCTTT chr4 - 94230402 45185578 45185577 45185751 49044652 49044651 49044825 174 TATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ...x:..x.:x:..xx.:.....:..:..xx.:::xx......--...x..........:::..:x...:.:x.:..::..........xx:....-:.......x:.:xx.x:....-----:..x..:...:xx..x:..:.xx.:....-.:.....:.....xx.::... 43M2I51M1I21M5I29M1I21M 106/165 64.2% 174/94230402 0.0% 9/165 5.5% -20526956 -73703446 +3257 chr4 + 190214555 24658626 24658625 24658710 85 TTTCTCTTTCTGTCTCCCTTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988814 18988813 18988896 75241507 75241506 75241589 83 TTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTT--TTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..x::.:..x...:.:x....:...xx.:..x.....--.........:....:.......x...x.xx...:.x:..:..x... 37M2D46M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 5669812 NA +3259 chr4 + 190214555 24658638 24658637 24658780 143 TCTCCCTTTTTCTTTTTCTCTTTTTCTTTCT-TTCTTTCTTTCTCTT-----TCTTTCTTTCTTTCTTTCTTTC------------------------------------------------TTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCT chr4 - 94230402 56151429 56151428 56151625 38078778 38078777 38078974 197 TCCCCTTTCTTCCCTTTCACAGCTCCTTACTCTTCTTTCTTACTCTTATTGTTCTATTACCCTTAATATCTCTCAAGAATAAAACACATACTTGCAGTAGTAGGTAGGTCATGCTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ..:..:..:...::....x.xx:.:...x..-.........x.....-----...x.:x::...xx.x...:..------------------------------------------------...:...:..:.x..:...:.x.xx.xx.::::..x.x...:....::::.............:........x.. 31M1I15M5I22M48I75M 98/143 68.5% 197/94230402 0.0% 54/143 37.8% -31492791 -62737611 +3374 chr4 + 190214555 24658644 24658643 24658714 71 TTTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988826 18988825 18988896 75241507 75241506 75241577 71 TTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ....x....:...xx.::.x...:..........:..:.........x...x.xx...:.x:..:..x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 5669818 NA +3510 chr4 + 190214555 24658645 24658644 24658789 145 TTTTCTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCT--------TTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 52381272 52381271 52381425 41848978 41848977 41849131 154 TTTTCTTCTTGTATTTTTCTTCCTATTCCTCGTTGGTTTT-TTTCATTCTACGTGGTGATTTCATTCTCAAACAGCTACTTTCTTCCCCTTTCTTCAGTTGCTTTGTTCTTTCCTGAGCTCATTATTTCTTTTTGCTTTTTAATCTTGGTTTCCT .......:..x.x........:..x.:::..x..xx:...-....x....x:x.--.xx....x....--------.x.......:.:.......:xx..x:...x.:...:.:.xxx::.x..x.......::x:....:xx....xx....:. 40M1D13M2I12M8I79M 96/144 66.7% 154/94230402 0.0% 11/144 7.6% -27722627 -66507775 +3254 chr4 + 190214555 24658649 24658648 24658726 78 CTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTT chr4 - 94230402 44322019 44322018 44322096 49908307 49908306 49908384 78 CCTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTT .:...:...:.xx.:.xx.:...x..:.x:...x..:x..:x.:....::......x...........:..:.:.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -19663370 -74567032 +3392 chr4 + 190214555 24658649 24658648 24658725 77 CTTTTTCTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTT chr4 - 94230402 8141239 8141238 8141315 86089088 86089087 86089164 77 CCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTT .::..:.x.:...x..x...:........x:..x...:::..x.....:...:...:..:.:.x.x:.:....:... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 16517410 NA +3011 chr4 + 190214555 24658658 24658657 24658746 89 TTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTC chr4 - 94230402 18988814 18988813 18988902 75241501 75241500 75241589 89 TTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC ..x.:.:..x.x.:..x........xx:::.x...:..........:....:.:.:.:.x.:.x.xx...:.x:..:..x.:.x..x.. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 5669844 NA +3252 chr4 + 190214555 24658672 24658671 24658828 157 TTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCCTTCC------------------TTCCTTCCTTT-----------------------------CTTTCTTTCCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTC------TCTCTCTCTTTATTTTTTTTCAG chr4 - 94230402 19053884 19053883 19054092 75176311 75176310 75176519 209 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTC-TTCTATTTGCCCTTCCTTCTTTGTTTTTCAGATGACATCCATCTTCATATCCTTTCAG ..:...:..:x.:.:.:x..xx......:x..:..:.:......xx...:.x:...:.:....:.....::..x.:------------------..x...x:.:.-----------------------------.x..x...:...x:...-....x.:.x:.:..........x...:..------:x..:x....:..x.::...... 76M18I11M29I17M1D29M6I23M 105/156 67.3% 209/94230402 0.0% 54/156 34.6% 5604788 NA +3076 chr4 + 190214555 24658673 24658672 24658754 82 TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCT----TTCTTTTTTCCTTCCTTCCTTC chr4 - 94230402 18988817 18988816 18988902 75241501 75241500 75241586 86 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC .:.:..x.x...:x:.:.:...xx:::.x...:..........:....:.......x...----...:.x......x:..x..x.. 60M4I22M 57/82 69.5% 86/94230402 0.0% 4/82 4.9% 5669856 NA +3708 chr4 + 190214555 24658712 24658711 24658824 113 TCTTTCTTTCTCTTTCT-TTCTTTCTTTTTTCCTTCCTTCCTTCCTTTCTTTCTTT-----CCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTC---TCTCTCTCTCTTTATTTTTTT chr4 - 94230402 45185590 45185589 45185711 49044692 49044691 49044813 122 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x..:.::.....:..-x...:xx....:.x....x...:...:........x..-----.....:..........xx:....:....::.:x:..x---::....x..x:..:.:...:. 17M1I38M5I37M3I21M 79/113 69.9% 122/94230402 0.0% 9/113 8.0% -20526878 -73703524 +4836 chr4 + 190214555 24659168 24659167 24659381 214 CTTGGTCCTTTCAGAGTCCCTTCTT-------TTGATGCAGGCAAGAAATCCTAATTTAGCATCACTTGTGATTATAATTAAGGTGCTGTTTACTCCCTCTTCCAGATCATTAATGAGGATGTTAAATGAGACC--------------AGAATGAAAC-------------CGTGTCCCCATGGCATTCCGCTAGACACCTTCCAACAACTTGACACTCTGCCATTTGCTGTTTCATTACCCTTTGTT chr4 - 94230402 51135112 51135111 51135352 43095051 43095050 43095291 241 CTTGGTCCCTTCCCACTGTTTTTATGTCATCACTGGTGTTTGCAACACCTCTTAATTTTGCATAATATGTGAATGCCATTAACTTGCTATTTACTCCCACTTTGAAATCATTGATGAGGATATTAAAAaacaacaacaacaacaacaaAAAAAAAAACCCTGGATCTAACACTTGTCCCTTTGGTGCTACTAGAAAGTTCTTCC-ACAACTTTATACTTTGGTATGTATC------TTATCCTTTGCT ........:...xx.x.x::..:x.-------:..:..:xx....x.xx..:......x....x.:x.....x.::x.....xx....:.........x...:x.:......:........:.....x:.x.x.--------------.:..x:....-------------.x......:x...:::.x.xxx.:.xx:.....-.......x.:...:..x:..x.:::------...:......:. 25M7I102M14I10M13I33M1D25M6D12M 140/207 67.6% 241/94230402 0.0% 41/207 19.8% -26475944 -67754458 +3290 chr4 + 190214555 24659210 24659209 24659297 88 TCCTAATTTAGCATCACTTGTGATTATAATTAAGGTGCTGTTTACTCCCTCTTCCAGATCATTAATGAGGATGTTAAATGAGACCAGA chr4 - 94230402 15978735 15978734 15978820 78251583 78251582 78251668 86 TCTCAATTCATTAGCATCTGCAAATTCTGTTAATGAGCTGTTTGCTTCCACCTCCAGATCACTAATGGAGA--TTAAATAAAGCTGGA ..::....:.x:.x..::..::.x.x:x:....x.x.......:..:..x.:.........:.....::..--......:.::.::.. 71M2D15M 57/86 66.3% 86/94230402 0.0% 2/86 2.3% 8680475 NA +4658 chr4 + 190214555 24659210 24659209 24659396 187 TCCTAATTTAGCATCACTTGTGATTATAATTAAGGTGCTGTTTACTCCCTCTTCCAGATCATTAATGAGGATGTTAAATGAGACCAGAATGAAACCGTGTCCCCATGGCATTCCGCTAGACACCTTCCAACAACTTGACACTCTGCCA------TTTGCTGTT--TCATTACCCTTTGTTT-----ACCTTGTGAGCTCA chr4 - 94230402 17209254 17209253 17209449 77020954 77020953 77021149 196 TCCTAGTTTAATAG-ATCTGCAGATTTCATTAATGTACCATTTACTCCCTCTTCTAGCTCATTATTGAAGCTATTAAATGAGATCAGAAGTAATACTAATCTGT---GTACTGCACTAAATGCCTCCCTTCAAAGTTATTGTTTATCATTACCCTTCATTGTTTGTCATCACCCTTCATTTCAGTCAACATGAGAGTTCA .....:....::.x-.::..:::x.x.x.....x..:.::..............:..x......x...:.x.:..........:.....xx..xx.xx:..:x:---.:.:.x.:...:.::...:..xx...xx.x.:xx.:.::..------..:::....--....:......::...-----.x.x..x...:... 14M1D89M3D41M6I9M2I16M5I14M 121/183 66.1% 196/94230402 0.0% 17/183 9.3% 7449956 NA +3426 chr4 + 190214555 24659238 24659237 24659297 60 ATTAAGGTGCTGTTTACTCCCTCTTCCAGATCATTAATGAGGATGTTAAATGAGACCAGA chr4 - 94230402 44891538 44891537 44891597 49338806 49338805 49338865 60 ATTAGGCTTCTGTTTGCTCCCACTTACAGATCATTAACGAGGATGTTGACTAAGTCAGGA ....:.x.x......:.....x...x...........:.........:.x.:..x.x:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -20232300 -73998102 +5343 chr4 + 190214555 24669020 24669019 24669307 288 TCCTGGGGTGGGAGCCGATTACACCACCGTGAGCAGCAGTGATA----GAAGCACAAGTCGGCACCGACTGTTAGGCTCATCTGCA-GAAATCCAGGCTCTCTGCATTCTGGAATAATTTGATCCACACCATCTGGCAGCTTGAAAGAAGAAGAAAAAGATGAAGAGGGA------GAAGAA-------ACAACAGCCATGTAGCATGAA-----TGTAATTCCTAATCTAAGTTATGCACTCCCATTTGCTTCATGTAATATGAGCCAAATTTAAACATGTCAACATCTCAACAATTGCTGATTTTTCAA chr4 - 94230402 18018819 18018818 18019118 76211285 76211284 76211584 300 TTCTGGGGTGTGA-TCAAACAGACCAGCACCACAGTCAGTGATAAAAGGAGGCAAAGTGCTGTGCAGACTGTTACATTCATCTGCTTAAAATTCTCATGGTCTGAGTGCTAGAATAATTTGCTCCACACCATCTGGCAGATATAAGAAAAATGAATATGTAGAGGAGGGAAGGTATGAGGAAGCTCTCTGCATTTTTTATAGAACGTAAAAATACTGGAGTTTGCAACTTAAGCCACACATCACTGTTCAAT--ATCTTAAATGCACAAGCTTTAAACA-------ATCTAAAAAA-TGCTGATTTTTAAA .:........x..-:.:.x:.x....x.::x.xx:x........----..:...x.:xx.x.::.x........x::........x-:....:.xx::xx....x:.x..:..........x.................x.xx..::..:.x...x.x.xx..:......------..:...-------:..x:xx::..:x.:.:.:..-----..x.:..:x:..::....::.::..::x.::..::x.--..x.x.x...x:.x.:x........-------....x..x..-...........x.. 13M1D30M4I38M1I83M6I6M7I21M5I37M2D25M7D10M1D14M 181/277 65.3% 300/94230402 0.0% 34/277 12.3% 6650201 NA +5722 chr4 + 190214555 24702664 24702663 24702792 129 AAACCAAATGTCAAAGATTGGAATAGTGACATTTACACTGTTTTAATTACCCAGCAAGATTGGTGTTTGTGGACTTGTTAAGTAGTTCCCAAACAAAGCAATGAAATTTAACGGTTTTGCTGTGCAACA chr4 - 94230402 18022626 18022625 18022751 76207652 76207651 76207777 126 AAACAAATCATTGGGGACTGGACAAATGATATTTACACTCTTTTAATTACCCACTGAGATTAGTGTTTGCGGTCTGTGTAAGTAGGTCAAAAACACAGCGATGGAAATTAA---TTGTGCTATGGAACA ....x..x::.::::..:....xx.:...:.........x.............x::.....:.......:..x..xxx.......x..xx.....x...:...:..x....---..x....:..x.... 111M3D15M 93/126 73.8% 126/94230402 0.0% 3/126 2.4% 6680038 NA +13411 chr4 + 190214555 24730012 24730011 24730329 318 AAGACAAAAGACTATTCCTGCCTTTTTCCGTTGGTTTTGGGTTTGGAGATGTTTGG-----------GTTTTGCACGGGGGAGAGTGATGATAAATGATCCTGAAGCCCGAGCTTTCTCTTTGCATGCAGCCTGGCCCTCAGGAGCATAAGCTAATGTTCCAGAGAGATGAAAAAGAGATAGAG-TTTGAGGGCGGCTGCCACCTGTCCCCGTGTAGTACGTGC--AATACAGGTGCCATTTATTTCACCTGTCACACGTACACAAATATG-TAAACCTCAGGAAAATCAGCTTTCCATCTTTCTCTGAGAAACTTGGTGTGAGCTTTGGAAA chr4 - 94230402 18033797 18033796 18034115 76196288 76196287 76196606 319 AAGGCAGAAGAAAACTCCCTCTATTCTTTATT-----CTGATATGGAAAAGTTCAGAGAGAGAGAGAGAGATACACAGGAGAGAGCTATGATAAATTATCTTTAAGTTTGCACTCTCACTCTGCATGCTGCATAGCCCTCAGGAGCATAAGTTAATGTTCCAGTAAGATGAAAAAGAGATAGAGTTTTGGGAGCTGGTGCCACCTAT---------ATACACACTGAATATCAATGTCATTTATTTCACCTGACATGCTTACACAAATATGTTAAACTTCAAGAAAATTAGCTTTTCATCTTACTCTAGAAAGTTGAATTTGAGCTTTGGAAA ...:..:....xx.:...:x.:x..:.:::..-----:x.:.x....:.x...::.-----------.xxx.:...:..:.....:x.........x...:.x...:::.x:..:..x..:.......x..x.:.................:...........x:...................-....:.:..x.x........:.---------:...:::.--....:x::..:...............x..::.x............-.....:...:......:......:......x....:::..::.x::.x............. 32M5D19M11I117M1I22M9D8M2I45M1I61M 226/304 74.3% 319/94230402 0.0% 29/304 9.5% 6696215 NA +13411 chr4 + 190214555 24730012 24730011 24730329 318 AAGACAAAAGACTATTCCTGCCTTTTTCCGTTGGTTTTGGGTTTGGAGATGTTTGG-----------GTTTTGCACGGGGGAGAGTGATGATAAATGATCCTGAAGCCCGAGCTTTCTCTTTGCATGCAGCCTGGCCCTCAGGAGCATAAGCTAATGTTCCAGAGAGATGAAAAAGAGATAGAG-TTTGAGGGCGGCTGCCACCTGTCCCCGTGTAGTACGTGC--AATACAGGTGCCATTTATTTCACCTGTCACACGTACACAAATATG-TAAACCTCAGGAAAATCAGCTTTCCATCTTTCTCTGAGAAACTTGGTGTGAGCTTTGGAAA chr4 - 94230402 18029931 18029930 18030249 76200154 76200153 76200472 319 AAGGCAGAAGAAAACTCCCTCTATTCTTTATT-----CTGATATGGAAAAGTTCAGAGAGAGAGAGAGAGATACACAGGAGAGAGCTATGATAAATTATCTTTAAGTTTGCACTCTCACTCTGCATGCTGCATAGCCCTCAGGAGCATAAGTTAATGTTCCAGTAAGATGAAAAAGAGATAGAGTTTTGGGAGCTGGTGCCACCTAT---------ATACACACTGAATATCAATGTCATTTATTTCACCTGACATGCTTACACAAATATGTTAAACTTCAAGAAAATTAGCTTTTCATCTTACTCTAGAAAGTTGAATTTGAGCTTTGGAAA ...:..:....xx.:...:x.:x..:.:::..-----:x.:.x....:.x...::.-----------.xxx.:...:..:.....:x.........x...:.x...:::.x:..:..x..:.......x..x.:.................:...........x:...................-....:.:..x.x........:.---------:...:::.--....:x::..:...............x..::.x............-.....:...:......:......:......x....:::..::.x::.x............. 32M5D19M11I117M1I22M9D8M2I45M1I61M 226/304 74.3% 319/94230402 0.0% 29/304 9.5% 6700081 NA +8011 chr4 + 190214555 24730479 24730478 24730667 189 GCTCTCAGAAGCAGGTGAGATGCAAGATAAAGCAATCGCTTTTCAACCACCTTTGACGTAAGTGCTGGAGATTTCTTCAATTAGCTTAATCCTTTCCTCCTG---------ACATACACTTTACAGGAAAGCAAATGCCATAATTATCCTCCCCCATCCTCTCTAATCCCTGTCTGTGTGGC-----ATGCCGACAGATGCTT chr4 - 94230402 18034677 18034676 18034876 76195527 76195526 76195726 200 GTTCTCAGAAGCAGGTGAGATGCAAGATTAAACAATCATTTCACAACCACCTTTCAAATACCTGCCAGAGATTTCTCCAATTAAGTTAATCCTCCTCTCTTTCCCTCTCACACAAACATTTTGTATGGAAGTAAATTCTGTAATTAGTCACCTAAATC--CTCTAATCCC-ACCTGTCTGGCTCTGAATCCTGGCAGCTGGTT .:..........................x..:.....::..:x...........x.x:..xx...::.........:......:x........:::...:.x---------...x...:...::.x.:...:....x.::......x:.x..:xx...--..........-::....x....-----..x.:.:...x..x.. 102M9I47M2D10M1D11M5I16M 140/186 75.3% 200/94230402 0.0% 17/186 9.1% 6695802 NA +16967 chr4 + 190214555 24747580 24747579 24748001 422 CTTTTTTAAATTTGTTTTTGTTTGTAGGTTTGTTTTTTGAGAAAGGCGA----TATCAGCCAGGATGG--GATTTTCCCCAAATAATTCTTTAGCAGAGTTTCA--GAATCTTTACTTTCCACCTTGACAGTCCCCAGAGACCAACTGAAAGGACCTCA--CTTAATGTCTCATCCAAAGGGTATT-TGCAGTACTGGCTTCATCATTCAAAGCAGGAAAGGCCTTTGTCATGGTCAAATGGCTTTAATGTGTTTTGAATGCTACATAAATTCAAACTTGATGGCTCATTTATTTGTTGGATTGAAGTTTTATACAA--TAAACTAAGCCTTGGTATTTACTAATAACTTGTGAACTGCCCTTTGTTTATTTAA---AACAGCCAGAAGGCAAAGAAGTTGACCGAGTCCCTCATGGCCAATATGATGTTCAGATCCT chr4 - 94230402 18041052 18041051 18041459 76188944 76188943 76189351 408 CTATTCTAATCttcttttttttttt--tttttttttttAAGCAGGGAAAGTATTACTACCGGAGACTGAAGATTTTCT--------GTTTTTAGTGAAATGCCATGGAGCCTTTACCTTCCACCTGGACAGCCACCA------AACTGAAAGGACCTTGGGTTTAATGTCTCATCTCAAGGATATTATAATGTGTTGGCCTCATTATTCACAGCAGAAAAGGCCTTTGTCATGGTCAGATGGCTTTAATGTGTTTCGTATGCTACATAAATTCAAACTTGATGGCTCATTTATTTGTTGGATTGCAGCGTTATTCAACCTAAATGAAGCCTTGGTATTTACTAATAATTTGGGCTCTGGCTCTTGTTTATTTAAGCGAGCAGC--------------GTCCACTGTCTCCTCTGTTGTCTGTATTAAGTTGGGACCCT ..x..:...x:..x.....x...x.--x...x......:..x.:..x:.----..::.x.x::..:x.--.......:--------x.:.....:::.:.x:..--..::......:........x.....:.x...------..............::--:.............:x....:....-.:xx..::....:....:.....x.....:....................:.................:.x..............................................x..:x....x...--....:x......................:...x.xx...x.::............---.:....--------------..:x..:.xx...::::.x.:.x:...x.x...x:..:... 25M2D22M4I15M2I8M8D18M2I31M6D16M2I25M1I130M2I55M3I6M14D41M 305/392 77.8% 408/94230402 0.0% 46/392 11.7% 6706528 NA +16772 chr4 + 190214555 24747580 24747579 24748001 422 CTTTTTTAAATTTGTTTTTGTTTGTAGGTTTGTTTTTTGAGAAAGGCGA----TATCAGCCAGGATGG--GATTTTCCCCAAATAATTCTTTAGCAGAGTTTCA--GAATCTTTACTTTCCACCTTGACAGTCCCCAGAGACCAACTGAAAGGACCTCA--CTTAATGTCTCATCCAAAGGGTATT-TGCAGTACTGGCTTCATCATTCAAAGCAGGAAAGGCCTTTGTCATGGTCAAATGGCTTTAATGTGTTTTGAATGCTACATAAATTCAAACTTGATGGCTCATTTATTTGTTGGATTGAAGTTTTATACAA--TAAACTAAGCCTTGGTATTTACTAATAACTTGTGAACTGCCCTTTGTTTATTTAA---AACAGCCAGAAGGCAAAGAAGTTGACCGAGTCCCTCATGGCCAATATGATGTTCAGATCCT chr4 - 94230402 18038092 18038091 18038494 76191909 76191908 76192311 403 CTATTCTAATCTTCTTTTTTTTTTT-------TTTTTTAAGCAGGGAAAGTATTACTACCGGAGACTGAAGATTTTCT--------GTTTTTAGTGAAATGCCATGGAGCCTTTACCTTCCACCTGGACAGCCACCA------AACTGAAAGGACCTTGGGTTTAATGTCTCATCTCAAGGATATTATAATGTGTTGGCCTCATTATTCACAGCAGAAAAGGCCTTTGTCATGGTCAGATGGCTTTAATGTGTTTCGTATGCTACATAAATTCAAACTTGATGGCTCATTTATTTGTTGGATTGCAGCGTTATTCAACCTAAATGAAGCCTTGGTATTTACTAATAATTTGGGCTCTGGCTCTTGTTTATTTAAGCGAGCAGC--------------GTCCACTGTCTCCTCTGTTGTCTGTATTAAGTTGGGACCCT ..x..:...x:..x.....x...x.-------......:..x.:..x:.----..::.x.x::..:x.--.......:--------x.:.....:::.:.x:..--..::......:........x.....:.x...------..............::--:.............:x....:....-.:xx..::....:....:.....x.....:....................:.................:.x..............................................x..:x....x...--....:x......................:...x.xx...x.::............---.:....--------------..:x..:.xx...::::.x.:.x:...x.x...x:..:... 25M7D17M4I15M2I8M8D18M2I31M6D16M2I25M1I130M2I55M3I6M14D41M 302/387 78.0% 403/94230402 0.0% 51/387 13.2% 6709488 NA +3680 chr4 + 190214555 24771043 24771042 24771183 141 ACCACTGACAAAAAAGTT-GATATTCTTCTAATAAAAA-CATCCAATTCAG----AGATAATGAAAACTAAAAAAAAACTGTATCTTCTCATAATCCTCAATTTTAATAAAATCTATGGGCTCTGGCAACAGGG-CTTACAAATGACA chr4 - 94230402 18043309 18043308 18043448 76186955 76186954 76187094 140 ACCCCTGTTAACAAAGTTTGGTAATCCTCTAATAAAAAACATCTAATCTGTCTCCGGCTTCTGCAAC--------ACACTTCATAACCTTATAATCCTCAGTTTTAATAACATCTGCAGGCTCTGAGAATAAAGCCCTGCTAGTGACA ...x...x:..x......-.:..x..:...........-....:...:::x----:.x.xx..x..x--------.x...x:..xx:..:..........:.........x....:::.......:x..:.::.-.:.:.x.:..... 18M1I19M1I12M4I12M8D59M1I13M 94/133 70.7% 140/94230402 0.0% 15/133 11.3% 6727734 NA +3200 chr4 + 190214555 24773415 24773414 24773495 81 ACATGTATACATGTACATACACATACATATATGTATACATGCATATAT--GTACATACACATACATATATGTATACATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...:..::...:....x....::..x..::...::....x..:..--:....:.....:...:.:.x::.:.x...x... 48M2I33M 54/81 66.7% 83/94230402 0.0% 2/81 2.5% 16377627 NA +3275 chr4 + 190214555 24773647 24773646 24773715 69 GTATGTATATATACATATATGTAAATTGTATTGCGTGTGTACATATATACACACACATAAACACACACA chr4 - 94230402 29311936 29311935 29312004 64918399 64918398 64918467 69 GCATGTATGTGTACATATATGCATAATGTATATAAAGTGTACACATACAAACACGTATGAACAAAGACA .:......:.:..........:.x.x.....xxx:x.......:...:.x....::..:....x.x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -4538289 -89692113 +3044 chr4 + 190214555 24776304 24776303 24776357 54 AAAAAAAAAAAAGAAAGAAAAAGAAAGAAAAAAGAAAGAAAACAAAAACATAAA chr4 - 94230402 65617539 65617538 65617592 28612811 28612810 28612864 54 AAAAAAAAAAAAGAAAGAAACAAAATAGTTAAAGAAAAAGAGCAGAAACTTAAA ....................x.:..x::xx.......:.:.:..:....x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -40841235 -53389167 +3212 chr4 + 190214555 24785486 24785485 24785573 88 GATTATTTCCAGTAGTGTTTAAAAAATATCCTTAGAATTTTCT---------TTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCCTTCCTTTTTTCTT chr4 - 94230402 88692377 88692376 88692473 5537930 5537929 5538026 97 GGTTATTTTAGAAAATGTTTCCATTTTATCACTAGAATTTTTTGATTTTTTTTTTCTGTTCTTTTTTCTTTCCCTTCTCTCACTCTCCTCCTCACCT .:......:x::x.:.....xx.xxx....x:.........:.---------.....x....:........:.:.......x.::....::.:x.:. 43M9I45M 61/88 69.3% 97/94230402 0.0% 9/88 10.2% -63906891 -30323511 +3257 chr4 + 190214555 24785521 24785520 24785590 70 AATTTTCTTTTCTTTTCTCTTT-----------------TCTTTTCTTTCTCTCTCCTTCCTTTTTTCTTTTCTTTTCTTTTCTTTT chr4 - 94230402 36600576 36600575 36600662 57629741 57629740 57629827 87 AATTTTCTGTTTATTTTCATTTACCAGCAGATAGCAAACTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTT ........x..:x...::x...-----------------..:...:..:.......:....:...:.::..:......x........ 22M17I48M 54/70 77.1% 87/94230402 0.0% 17/70 24.3% -11815055 -82415347 +3024 chr4 + 190214555 24785524 24785523 24785605 82 TTTCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCCTTCCTTTTTTCTTTTCTTTTCTTTTCTTTTATTTTCTCTTCTTTC chr4 - 94230402 28866463 28866462 28866544 65363859 65363858 65363940 82 TTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTC ..:..x.:x....:..x.:....::::xx:..::.:..x:x...::.......:..x:........x..x.:..::...... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% -4080939 -90149463 +3351 chr4 + 190214555 24796399 24796398 24796465 67 TTCTTTCCCCCTTTTCCTCCTCCTCCTCCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 40193311 40193310 40193377 54037026 54037025 54037092 67 TCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGA .::....:.:..:.x:..::.x......xx:....x.................:.....::.:x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -15396912 -78833490 +13005 chr4 + 190214555 24799687 24799686 24800160 474 GACGGCGCGCTCCACGCCGCCTGCCAGGTGCAGCCGTCGGCCACGCTGGACGCCGCGCAGCCCCGGGTGACCGGCGTCGTCCTCTTCCGGCAGCTTGCGCCCCGCGCCAAGCTCGACGCCTTCTTCGCCCTGGAGGGCTTCCCGACCGAGCCGAACAGCTCCAGCCGCGCCATCCACGTGCACCAGTTCGGGGACCTGAGCCAGGGCTGCGAGTCCACCGGGCCCCACTACAACCCGCTGGCCGTGCCGCACCCGCAGCACCCGGGCGACTTCGGCAACTTCGCGGTCCGCGACGGCAGCCTCTGGAGGTACCGCGCCGGCCTGGCCGCCTCGCTCGCGGGCCCGCACTCCATCGTGGGCCGGGCCGTGGTCGTCCACGCTGGCGAGGACGACCTGGGCCGCGGCGGCAACCAGGCCAGCGTGGAGAACGGGAACGCGGGCCGGCGGCTGGCCTGCTGCGTGGTGGGCGTGTGC chr4 - 94230402 18050300 18050299 18050773 76179630 76179629 76180103 474 GATGGGCTGACCTACGCCACCTGTGAAGTGAAGCCCAGCTCCAAAATAGATGCTGACAAGCCACAAGTGACTGGACAAGTCTTATTCAGACAGCATTACTCACAAGGAAAATTAGAAGCCATTTTTCACTTGGATGGGTTTCCTCTGGATAACAACCAGTCTGGCAGGGCCATACACATCCATGAGCTCGGAGATCTCAGCGACGGCTGCAACTCCGCGGGAGGACACTACAACCCCTTTGGAGTGAACCACCCCCGCCACCCAGGGGACTTCGGCAACTTTTCTCCTAAAGATGGCAAGATCAGAAAATACAAACCCAACCTCTTCGCCACAATGTTTGGTCCGTACTCCATCCTGGGCAGATCCGTTGTGATCCATGAGCAGGAAGATGACATGGGCAAGGGCAATAACAAGGCCAGTCTGGAAAATGGAAATGCTGGCAAACGTCTGGCGTGCTGCGTGATTGGGATCTGC ..:..xx:.x:.:.....:....:x.:...x....xxxxx...x:x.:..:..:.xxx....x.::.....:..xxxx...:.x...x.:....x.xxx:.x.:x.xx..::.x..x...x.:..:xx.:....x..x..:..xx:x..xxxx...x:x..::..x.x.....x...:.x..:x..:....:..:..x...x.x......:.x...:.x..:xxx...........x:.x.xx...xxx.....x.:x.....:..x..............:x.xx::x:x..:....:xx..x.:.::...x:xx..::...xx:....x.:x.xx:x..:...:........x.....x.:x....x..x:....:.xxx:x..:..:...x.....x:x...:::...x.......:x....:..:..:..:..x...x::..x.....x.........:.x..x:.x... 474M 291/474 61.4% 474/94230402 0.0% 0/474 0.0% 6749387 NA +8621 chr4 + 190214555 24799900 24799899 24800160 261 TCCACCGGGCCCCACTACAACCCGCTGGCCGTGCCGCACCCGCAGCACCCGGGCGACTTCGGCAACTTCGCGGTCCGCGACGGCAGCCTCTGGAGGTACCGCGCCGGCCTGGCCGCCTCGCTCGCGGGCCCGCACTCCATCGTGGGCCGGGCCGTGGTCGTCCACGCTGGCGAGGACGACCTGGGCCGCGGCGGCAACCAGGCCAGCGTGGAGAACGGGAACGCGGGCCGGCGGCTGGCCTGCTGCGTGGTGGGCGTGTGC chr4 - 94230402 18054068 18054067 18054328 76176075 76176074 76176335 261 TCCGCGGGAGGACACTACAACCCCTTTGGAGTGAACCACCCCCGCCACCCAGGGGACTTCGGCAACTTTTCTCCTAAAGATGGCAAGATCAGAAAATACAAACCCAACCTCTTCGCCACAATGTTTGGTCCGTACTCCATCCTGGGCAGATCCGTTGTGATCCATGAGCAGGAAGATGACATGGGCAAGGGCAATAACAAGGCCAGTCTGGAAAATGGAAATGCTGGCAAACGTCTGGCGTGCTGCGTGATTGGGATCTGC ...:.x..:xxx...........x:.x.xx...xxx.....x.:x.....:..x..............:x.xx::x:x..:....:xx..x.:.::...x:xx..::...xx:....x.:x.xx:x..:...:........x.....x.:x....x..x:....:.xxx:x..:..:...x.....x:x...:::...x.......:x....:..:..:..:..x...x::..x.....x.........:.x..x:.x... 261M 167/261 64.0% 261/94230402 0.0% 0/261 0.0% 6745832 NA +3022 chr4 + 190214555 24802207 24802206 24802264 58 AGAGCCAAAAAACCAAAACGAAACAAAACAAAAAACCCCAAAACAAAAAAGCAAAAAG chr4 - 94230402 39607340 39607339 39607397 54623006 54623005 54623063 58 AAAACCAACCAACCAAAGCAAAACAAAAAAAAAAGTTAAAAAAAAAAAAAGTAAAGAG .:.:....xx.......:.:........x.....:::xx....x.......:...:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -14805133 -79425269 +6758 chr4 + 190214555 24803456 24803455 24803830 375 CCGCTTGCCCGGTGGTGAGGGTGGAATATGAAGCAAACAATAAAGATAATTCATCATCTCTATCAGGAAAATTGCCACATG--TTTATTTCAGGTAACAAAAAAGAT--ATAGTTATGATATACAATGACCATAGAATCCAAT--------AAAGCAACTTCTGCAAATGAATAGAAGGTACTTTTTCTTT----AAATGAAACTACAAAATAGCAGCTGGTTTTAAAAACAAAGCCAATTGTTTTAGA--TTTAATAGGCTACCA--CTGGCCTCTGCTAAGATCCCCAAATATATTCCTGAGCTCACATAGATTCCAGAAAGTCAAACTTTTCAATATTATGCAAACTTTCCCTATGCATCCAAAAA-ATTCTCATTTAGTAAAGAGGTGATAT chr4 - 94230402 18051834 18051833 18052197 76178206 76178205 76178569 364 CCGTTCATCTGATACTGAGAGGAG-----GAAATAAGCAGGTAGAAGAAGCCA--------ATCAGGAAA-----TGTATGGTTTTATTCTAGATGACAAAATATATCAATAGAGTTGAACTATGTTGCGCAGTTAATCCAGGCAGCAACAAAAGAGAGGTTTGCAAATAAAT----TATACCGCGTCATTTAAGAAGTAAAACTACAAAACAGAGGCTGGT-----AAACAAAACCCTATCTTTTAGAAACGTAGCAGACTTTCAACTTCATCTCAGTTAAGATTTCAAAATACATTCCTGAGCTCATACGGATTAAAGAAATTCCG--CTGTCTTTATTATACAAA---TCACTGTACGCTTAAAAATAGTCTCGCTTAGAAAAGAGGCAACAT ...:.:::.:.:.:x....:.x:.-----...::..:..:xx.::.x..x:..--------.........-----:::...--......::..:.:......x.x..--....xxx...xx..::x..xx..xxx......:x--------....x:.xx.:.......:...----x:...:x:x..x..----..:.:...........:..x:......-----.......:..xxx.x.......--:x..::..:..x:..--:.x::...x.:......::.x.....:.............:.::....xx.....x..x:--:.x..xx......:....---..x..:.:.::::.....-.x....::....x.......::.:.. 24M5D24M8D9M5D6M2I24M2I34M8I22M4D14M4I27M5D22M2I15M2I60M2D18M3D18M1I26M 230/343 67.1% 364/94230402 0.0% 53/343 15.5% 6751622 NA +6880 chr4 + 190214555 24803456 24803455 24803830 375 CCGCTTGCCCGGTGGTGAGGGTGGAATATGAAGCAAACAATAAAGATAATTCATCATCTCTATCAGGAAAATTGCCACATG--TTTATTTCAGGTAACAAAAAAGAT--ATAGTTATGATATACAATGACCATAGAATCCAAT--------AAAGCAACTTCTGCAAATGAATAGAAGGTACTTTTTCTTT----AAATGAAACTACAAAATAGCAGCTGGTTTTAAAAACAAAGCCAATTGTTTTAGA--TTTAATAGGCTACCA--CTGGCCTCTGCTAAGATCCCCAAATATATTCCTGAGCTCACATAGATTCCAGAAAGTCAAACTTTTCAATATTATGCAAACTTTCCCTATGCATCCAAAAA-ATTCTCATTTAGTAAAGAGGTGATAT chr4 - 94230402 18055389 18055388 18055752 76174651 76174650 76175014 364 CCGTTCATCTGATACTGAGAGGAG-----GAAATAAGCAGGTAGAAGAAGCCA--------ATCAGGAAA-----TGTATGGTTTTATTCTAGATGACAAAATATATCAATAGAGTTGAACTATGTTGCGCAGTTAATCCAGGCAGCAACAAAAGAGAGGTTTGCAAATAAAT----TATACCGCGTCATTTAAGAAGTAAAACTACAAAACAGAGGCTGGT-----AAACAAAACCCTATCTTTTAGAAACGTAGCAGACTTTCAACTTCATCTCAGTTAAGATTTCAAAATACATTCCTGAGCTCATATGGATTAAAGAAATTCCG--CTGTCTTTATTATACAAA---TCACTGTACGCTTAAAAATAGTCTCGCTTAGAAAAGAGGCAACAT ...:.:::.:.:.:x....:.x:.-----...::..:..:xx.::.x..x:..--------.........-----:::...--......::..:.:......x.x..--....xxx...xx..::x..xx..xxx......:x--------....x:.xx.:.......:...----x:...:x:x..x..----..:.:...........:..x:......-----.......:..xxx.x.......--:x..::..:..x:..--:.x::...x.:......::.x.....:.............:..:....xx.....x..x:--:.x..xx......:....---..x..:.:.::::.....-.x....::....x.......::.:.. 24M5D24M8D9M5D6M2I24M2I34M8I22M4D14M4I27M5D22M2I15M2I60M2D18M3D18M1I26M 231/343 67.3% 364/94230402 0.0% 53/343 15.5% 6748067 NA +3132 chr4 + 190214555 24804486 24804485 24804532 47 CAAAAAAAAAAAAAAAAAAAAAAAGAAGTAGGGTACCAAGTCATCCA chr4 - 94230402 20475870 20475869 20475916 73754487 73754486 73754533 47 CAAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACA ....................:..:......:....xx...x...x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 4328616 NA +15555 chr4 + 190214555 24807993 24807992 24808851 859 ACCCCATCAGTTTCTAGCTCTTCCC------------ATAATTTTGATTGACAACATTAAATGCTAATACAAAAACATCTTATCTCTGATAAAACAAAAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCA--CTCTCTGGCAGAAAAGAGATGACACTGAGAAGCTTGAGGACCTACATTTAATAAATCAAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGT--------CATTGTG-------TCAGATCCCTCTCCCCTTCAGGT----TTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCC----------GGCTG-----------GCCTCGAAGGAGTCCAGG-TGAGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCTGGCGGGGCTGGCCCCGTCTCACTCCTCTGACCTTCTATGGGACTCTCTCTTCTGACCTCTTCCAGTTCTGCAGCTGCCTGTTCCTTTGTCAGTTTAATTATTTCCCTCCCAAGGCTGTTTA---CTTCTTCCTCAGAAGGTAACTGGGGTAATGAAGGATGAAAGAGCTTGCATTGGTTCCCGCGGCTCTGATTTGCTGGGGAGTTGACAGCGGGCCTCCCAGCATCCTCAGGCGCTGTCAACGCCTCAGCAGCGGCACAACTTTCATCTTCTTCTTGCTTCTGAGCCTCCCCTGAAAACAGAACGAGGACAACATTAAACCTC chr4 - 94230402 18060151 18060150 18060983 76169420 76169419 76170252 833 ACCCCATTAGCTTCAAGTTCTTCCCCTCAGACAACTTACATTTTTGGTATGCTGCAGTCAAAACTAACAGAATA---------CTGTTATCAGACCAATATTAACAGA----CTGATGTAAAAAATCAGCTCTTTGACAGAC--------TTGCACTGTTCATAATCACAGTAGCATACACACTTGCAAGAG---GATTACAGTGAGAAGCTTGAGGGCTTGGATTTCATACCTCAAGCCAAGTTGTTATCCT---AATATTCACAGTTTTCAGCAGCATCAG-ATGGTTTCTTGTTTTCAGATTCAG-GGAGCTCCTCGAGGCCGATATTTGTGTGTGCAGTTGTAGCACTGAGACCCCCATGCCTTTTGGTGTCCTCACTGGGCACCACATCCATGGTGCTGCCATTCTGAT---TCTCTCCTTCATGTGTAATTTCACAGT--------------CACTCTCTGAAGTTTCATCACTGCCTTTCAGGGCCTCAGTTTCGGCTGTCTGCTCATTTTCTGAGGCTGAGGGGTCTGTAGGGTCAGACGGGTCCGGGCTGGGCAATGCGAAGCCTCCCTCAGATGA----ACCATTCAGCTCTGCTCTAACCACAGTCTTCTGCTCTTCAGATGAATTTTCTGTTCTTTTCCCTTCCAGTTCTGCAACTGCCTGTT---TTGTCAGTTTAATTATTTGACTTCCAAGCTTGTTTATTTCTTCTTCCTCAGAATGTAACTTGGGTAATGAAGGATAAAAGTGTTTATTTTGGTTTCTGTTATTCAAGTTTCTT---------------------------TCCTCCGAAGCCATGGAATCATGTGCAACAGCAGTAGTTTCTTCACGTTCCCTCTTCTG---TTCTGCTGAAAG-AGAAACAGAACAGCAACATGCCTC .......:..:...x..:.......------------.:.x.....:.xx:.x:..x.x..x:....:.x..x.---------..x.x..x.:..x..x::.:.....----.x....:x:....:....:x.x..:::...--------.x.xx...x:.x.:x...........--.x.x..x...::.:---...x...x..............:.:.:x....x...xx....:.::x::..x:...x.---..............x..:...x.....-::.x.....:::..x....:..:.-..x::.:.xx...:xx.xx.:x..x.:.::.x:..x:::::..xx:x:.::x.:x.::.:...x.:::...x..x.:--------...x...-------..x...---....:......x..----......:..--------------.:.:.....:::.::.x.::.:.:...:.:.x.:xxx..:..:.....::x..:----------.....-----------.xx..::.x.:....:..-..:.xxx.:x.:...::...:::....:----:..xxx.:.xx...x:.:x::.x..x..:....x:....x:xx.:.:.:...x....xx:.:..............:.........---..................xx..:.....x:......---..............x......x..............:....x.:..::x......:.:.:x::..x::...x:.---------------------------.....x.:x..::.x:.xx.x.xx...:.:...xx.x....x..x:x...::x......---:..:x......:-....xx..:...:..x:.x:.... 25M12I37M9D25M4D30M8D26M2I14M3D58M3D27M1D24M1D77M8I7M7I6M3D14M4I9M14D54M10I5M11I18M1I28M4D86M3D36M3I74M27D59M3D12M1D24M 506/775 65.3% 833/94230402 0.0% 142/775 18.3% 6747842 NA +3583 chr4 + 190214555 24816166 24816165 24816246 81 CAGCCACAACCTCCTGGGTTCAAGGGATCCTTCCGCCTCAGCCTTCCGAGTATCTGGGACTACAGGCATGTGCCACCATGT chr4 - 94230402 18197129 18197128 18197207 76033196 76033195 76033274 79 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT .....xx..x..:...........x.x.:.x:xx.x.........:.:....x....:......--.:..::....::... 64M2D15M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% 6619037 NA +10667 chr4 + 190214555 24820921 24820920 24821193 273 TATTTCAATTGACTA----TTCTAATCAGAGAAGTTCAAGGAAAGGTAGATAATGCATTTCTACTTATTTACATGCAGGGATGACAT--AATACACTGCTGATATTAGCCAC-AAAAACGGATATTTTAAACAGAACATACTCCCAAATCCTACTGAAACATTGTAGCTCAGGCCTTCAGGCAGCAA---AAAGAAAAAAAGGAAATAATTGTTATTGCAT-AATAGCCATTTGAAGTTGCACCTAGACCAAACAAAACCATAGAAAATTCTCGGCATTTGTTC chr4 - 94230402 18073066 18073065 18073337 76157066 76157065 76157337 272 TAATTCACTTGACTAAACATCTTAATCTGACAGATAGAAAAATGTTTAGATAA--CATTTCCATTTATTTACATGCAGAGATAATATTTAATGTACTGCTAAAATAAGTTACTAAAAATATACATGTCAAGCAGAACCTACTCCCAAATCCCACTGAGACATTGTAGCTCAGGCCTTCAGGCAGCAAAAGAAAGGAAGGAAAGAAACAGTTGTTAATGTATAAATATCAAATTGATGTCTTACCTCCAC--AGATAAACAATGGA--------GCCATTTGTTC ..x....x.......----.::.....x..x.::.xx..::.x:xx.......--......:.:..............:...:.:..--...::......:.x..x..::..-.....::x.:..x.:..:......x.............:.....:.............................---....:..::..:....:.:......x..:..-....x.x.x....x..:x:....xx..--.:xx....x..:..--------.x......... 15M4I34M2D32M2I23M1I74M3I31M1I27M2D14M8D11M 200/261 76.6% 272/94230402 0.0% 23/261 8.8% 6747855 NA +10667 chr4 + 190214555 24820921 24820920 24821193 273 TATTTCAATTGACTA----TTCTAATCAGAGAAGTTCAAGGAAAGGTAGATAATGCATTTCTACTTATTTACATGCAGGGATGACAT--AATACACTGCTGATATTAGCCAC-AAAAACGGATATTTTAAACAGAACATACTCCCAAATCCTACTGAAACATTGTAGCTCAGGCCTTCAGGCAGCAA---AAAGAAAAAAAGGAAATAATTGTTATTGCAT-AATAGCCATTTGAAGTTGCACCTAGACCAAACAAAACCATAGAAAATTCTCGGCATTTGTTC chr4 - 94230402 18069919 18069918 18070190 76160213 76160212 76160484 272 TAATTCACTTGACTAAACATCTTAATCTGACAGATAGAAAAATGTTTAGATAA--CATTTCCATTTATTTACATGCAGAGATAATATTTAATGTACTGCTAAAATAAGTTACTAAAAATATACATGTCAAGCAGAACCTACTCCCAAATCCCACTGAGACATTGTAGCTCAGGCCTTCAGGCAGCAAAAGAAAGGAAGGAAAGAAACAGTTGTTAATGTATAAATATCAAATTGATGTCTTACCTCCAC--AGATAAACAATGGA--------GCCATTTGTTC ..x....x.......----.::.....x..x.::.xx..::.x:xx.......--......:.:..............:...:.:..--...::......:.x..x..::..-.....::x.:..x.:..:......x.............:.....:.............................---....:..::..:....:.:......x..:..-....x.x.x....x..:x:....xx..--.:xx....x..:..--------.x......... 15M4I34M2D32M2I23M1I74M3I31M1I27M2D14M8D11M 200/261 76.6% 272/94230402 0.0% 23/261 8.8% 6751002 NA +7345 chr4 + 190214555 24822454 24822453 24822590 137 GAAAAAAAAAAAAGGAAAATTGTTTTCATGAGGTTCTGTTTACCTGGAAGACTCCACAAACCAGAAACTTCCAGAGTTCTTAATTTTTTTTCCAGCTCAGCCACCCGATTCCCTAGGATTCT---GAAAAAAGGGGAGAA chr4 - 94230402 18074541 18074540 18074680 76155723 76155722 76155862 140 GAAAACTAAATAACACAAGTTGATCTCTTGAATTTTTACTGACCTGGAAGACTCCACAAGCCAGCAATTTCCAAGGTTCTTAATTTCTTTTCTAGTTCCGCCACTCGATTACCTAGAATTCTTTGGAAAAAAAAAGAAAA .....xx...x..x:x..:...x.:..x...:x..:.::.x..................:....x..:.....::...........:.....:..:..x.....:.....x.....:.....---.......:::..:.. 122M3I15M 105/137 76.6% 140/94230402 0.0% 3/137 2.2% 6747913 NA +7654 chr4 + 190214555 24822454 24822453 24822598 145 GAAAAAAAAAAAAGGAAAATTGTTTTCATGAGGTTCTGTTTACCTGGAAGACTCCACAAACCAGAAACTTCCAGAGTTCTTAATTTTTTTTCCAGCTCAGCCACCCGATTCCCTAGGATTC--TGAAAAAAGGGGAGAAAATGACAA chr4 - 94230402 18071391 18071390 18071537 76158866 76158865 76159012 147 GAAAACTAAATAACACAAGTTGATCTCTTGAATTTTTACTGACCTGGAAGACTCCACAAGCCAGCAATTTCCAAGGTTCTTAATTTCTTTTCTAGTTCCGCCACTCGATTACCTAGAATTCTTTGAAAAAAAAAAAGAAAACAAAAA .....xx...x..x:x..:...x.:..x...:x..:.::.x..................:....x..:.....::...........:.....:..:..x.....:.....x.....:....--........::::......::.x.. 121M2I24M 110/145 75.9% 147/94230402 0.0% 2/145 1.4% 6751063 NA +3084 chr4 + 190214555 24825376 24825375 24825436 61 TGTTAGCCTTATTTTGTAGGTGAGAAAACTGAGACTCAGAAAGGTCACTTAACTCACCCAG chr4 - 94230402 10729198 10729197 10729258 83501145 83501144 83501205 61 TATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .:.:...:::.....::.....:..........:.x..x.x....:.xx...:.::..... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 14096178 NA +10815 chr4 + 190214555 24831484 24831483 24831652 169 ACACAAGAGTTTGGCCACCTACTTGTTGGTTTGCCTCTGGTGCTGAATGACCATGTTTTTCTCGTGGATTGTTTCCAACAGGGCTGTTGCCAGAGATTTCAGGTCAGAAATGGACTGCGGAGTAGCTGGGAGGCTGCATCCATGATCCTCAGATAGCAGATCCTGAACT chr4 - 94230402 18081822 18081821 18081990 76148413 76148412 76148581 169 ACTTAAAAGTCATGCTACCTACTTGTTGGTTTGCCTTTGGTGTTGTATGACCATGTTTTTTTCATGGATTGTTTCCAACAATGCAGTGGCCAGTGATTTGAGATCTGAAATGGACTGTGGTGTGGCTGGTAGGCTACATCCATGATCCTCTGACAACAACTCTTGGACT ..x:..:...:xx..:....................:.....:..x..............:..:................:x..x..x.....x.....x..:..x...........:..x..:.....x.....:..............x..:.:..:x..:..:... 169M 137/169 81.1% 169/94230402 0.0% 0/169 0.0% 6749662 NA +7090 chr4 + 190214555 24834945 24834944 24835062 118 TACCTTGCTTTGCAGACAGGACTCCTGTCAGAGCACTGCTGCTGGATTTACCCTGGCCCTTCGAGTTTTTCCGTCTCTCCAGAGCATTCTAAAACAGGATTGGGAGAGAATAAAAACC chr4 - 94230402 18083661 18083660 18083768 76146635 76146634 76146742 108 TACCTTGTTTTGCAGACAGGACTCCAGTCAGAGCACTGCTACTGGATCTACTATGAGTCTTTGAATTTTTCCGTCTCTCCAAAGCATTCTAA----------GGAAACAACAAATACC .......:.................x..............:......:...:x..:x:...:..:................:..........----------...:.x..:...x... 92M10D16M 92/108 85.2% 108/94230402 0.0% 10/108 9.3% 6751284 NA +5519 chr4 + 190214555 24836433 24836432 24836541 109 TACCTTGTATTTGGCAATGTTTGATTTCAAGAGGTTGACCTCTTCATGGAGTTGCTTTAATCTCTCTTGAAGGTACCTGAAAAAGAATACATAAAACTAGGAGGTGTTT chr4 - 94230402 18085030 18085029 18085133 76145270 76145269 76145373 104 TACCTTATATTTAGTAATATTACACTTAAGAAGGTTCACTTCCTCTTGAATTTGCTTTAATCTCTCTTGGAGGTACCTGGAAAAAAAGAAAAAAA-----GAGATGTTT ......:.....:.:...:..xx.:..x.::.....x..:..:..x..:.x..................:.........:....:..x.x.x...-----...:..... 95M5D9M 81/104 77.9% 104/94230402 0.0% 5/104 4.8% 6751403 NA +10475 chr4 + 190214555 24837221 24837220 24837420 200 CACTTGCCTGTTCTCCATACACAGGGCGTCCACGTCAATGATGCGGTTCTCGTGCCCACTCAGGATATGGTTCAGCTCCTGGTTGAGCCTCTCCACTTTGTCCTGGTAGGAAGACCGTTCTTCTTTAACATCCTGAAGCTCGTCCACAGAAGCCTGCAGGTCGTGCTCCAGAGACTCAATCTAAAACCACAGGGAGAGCC chr4 - 94230402 18086581 18086580 18086779 76143624 76143623 76143822 199 CACTCACCTGTTCTCCATACAGAGAGCATCTATGTCAATGATACGGTTCTCATGTCCTCCTAAAACATGATTGAGCTCTTGGTTTAATCTATCAGACTTATCTTGATAAAAAGAGCGTTCTTCTTTAACATCCTGTAACTCGTCTAGTGCAGACTGAAGATCATGATTCAGAGCCTCAATCTGAAAAGA-AAGGAGAGTC ....::...............x..:..:..:.:.........:........:..:..x.::.::.:...:..x.....:.....x.::..x..x:x:..:..:..:..::....x....................x.:......:.xx.x..x...x..:..:..x.:.....x........:...xx.-.:......:. 189M1D10M 148/199 74.4% 199/94230402 0.0% 1/199 0.5% 6750640 NA +5944 chr4 + 190214555 24838154 24838153 24838275 122 ACCTGTTCCTTAGCTCGCTCTAGCTGCTGCACCAAGTCTTCACGCTCATGGGCTGCAAAGTGTCGCACGCCGATTGCTTCGTCTCCGAGCCTTTGTTTGGCAATCGTCATCCTCAAGAGCTG chr4 - 94230402 18088234 18088233 18088355 76142048 76142047 76142169 122 ACTTGTTCTCGAGCCTTCTCCAGTTGTTGAACAAGATCCTCACGTTCATGTGCTGCAAAGTGGCGAGCTCCAACTTCGTCATCTCCAAGTCTTTGCTTTGCTATTGTCATTCGAAGGAGCTG ..:.....::x...::x...:..:..:..x..x.::..:.....:.....x...........x..x:.x..:.:.x.x..:.....:..:.....:..x..x..:.....:.xx.:...... 122M 86/122 70.5% 122/94230402 0.0% 0/122 0.0% 6749920 NA +3203 chr4 + 190214555 24839039 24839038 24839092 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:.....:............... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -42813045 -51417357 +9266 chr4 + 190214555 24852481 24852480 24852779 299 GTACTTTTGTTCATAGCTTCAGCTGGGAGAGAGAGTGCACACATTTAGTTGGGAGTTTATGAGTTCATATTTTATAATTAACGTTGCCAACAGGGGAGTTTGATTAATACCAAGCAGTGGATTTTGAGCAATGTTCCATACAAATTGCCAAATTTAGCAATAAAATAAATTGGTTATGAGAACATAATTAGTAGGATGACTACTTAAAATTCAAAACCGAATGTGAATAATTCCAAATCATCTGAGCCACAAATCCATTATTTGTATATAAGGGCGAAAGTATAACATTTGGGTTTTAT chr4 - 94230402 18097213 18097212 18097470 76132933 76132932 76133190 258 GTACTTCTGCATAT-GCTCCAGCTGTGAATG---TTACACACATTTGGCT---------TGAGTTTAAATATTTCAATTAACAGAGACAACAGG--AGTTTGATTAATACCAAATGGCAGATTTTGAGCAATGTTCCACATAACTTGCTAAATTTAGCAATAAAATAAATTGGTTATG----------TAACAGGATGAGAGCTT--AGTACAAAGCTAAATATACAT-CTTTTTGATGACCTGCTCCA---------TATTTCTGTA----GGGAAAAATATGCCTTCCTGGTTTTAT ......:..:x:..-...:......x..:x.---x.:.........:.:.---------......:.x..x..x:.......:xx.x.......--.................:::.::...................:.:..x....:.............................----------..::.......xx:...--.:.x....:.::...:.:x..-x..::x:..x.:...xx...---------.....x.:..----..x:...:...:x.x.::x........ 14M1D16M3D16M9D35M2D82M10D17M2D21M1D20M9D10M4D27M 195/258 75.6% 258/94230402 0.0% 41/258 15.9% 6755268 NA +13455 chr4 + 190214555 24852481 24852480 24853252 772 GTACTTTTGTTCATAGCTTCAGCTGGGAGAGAGAGTGCACACATTTAGTTGGGAGTTTATGAGTTCATATTTTATAATTAACGTTGCCAACAGGGGAGTTTGATTAATACCAAGCAGTGGATTTTGAGCAATGTTCCATACAAATTGCCAAATTTAGCAATAAAATAAATTGGTTATGAGAACATAATTAGTAGGATGACTACTTAAAATTCAAAACCGAATGTGAATAATTCCAAATCATCTGAGCCACAAATCCATTATTTGTATATAAGGGCGAAAGTATAACATTTGGGTTTTATTTTGCCCTCA--------------ACCACAGTGTTATTCACCACTAAGTTGAACAT------------------------AATGAAACTTCCACAATGGGTTGTGGCAATA----------TTTTAGAGCCA--CTGAGAAACACACATATACATGCATGCACACACACAAAGGGAATG--TAAAAAGGTAAGATACGCTAAACT-GCGAATTTTCATTATAAATTT------------------AAAAATCTAT----AACAAACTTTTCAACAAATGCTGCATTACATTTTTCCGATGT---------------------GCAATATATAAACCTCGAACGC-----ACAATGTTGCAGCAGAGCTTCTTCCCTGTAAAT------ACTCACAGTACCTTGTTGTCGCCCTGGACTTCTCCAAGCCTTTGCTGAAGTTCTTTAATTTCTTCTCCCAGATGTTTATTTCGGTCCTGAGAATCTCTCAATAGTTGTGCAAGATTAGCCTAGAAATATCAACACATTATGAAATA-CAATCAGAA----------ATGGAG--------GAGTGGATGAATGCAGGGCTTCATTGGGCTT chr4 - 94230402 18093783 18093782 18094618 76135785 76135784 76136620 836 GTACTTCTGCATAT-GCTCCAGCTGTGAATG---TTACACACATTTGGCT---------TGAGTTTAAATATTTCAATTAACAGAGACAACAGG--AGTTTGATTAATACCAAATGGCAGATTTTGAGCAATGTTCCACATAACTTGCTAAATTTAGCAATAAAATAAATTGGTTATG----------TAACAGGATGAGAGCTTAGTA--CAAAGCTAAATATACATCTTTTTGA-TGACCTGCTCCA---------TATTTCTGTA----GGGAAAAATATGCCTTCCTGGTTTTATCATCTACTAATATCTTCCATTTTCACTGCAGTGAAAAATATCAC-ATGCTGAAAATGAAATGCTTATGCACGTAAGAGGAAATATCACTAATAAAATATATTTTAAAAGTAACCCTGAGATTATTAAAGCAAGGCTGGGTGCAATATTTATAATTAAGGACAAGTGAACAAAAGCAGTAAATCAAAATATCTAATGAGCTGCACTTACTGGTCTCCTATACAGGCTTCTTTTGTTTGACTATATTGAGCATTTATTGTAATCAAAATATTCCAGAAGTTCTGTAACCCATTGTTTTGATTTATTTCTTTGTTTTCCAAAGAAGCAA-ATGCAAAACTCCAGCCCTGTTTACA-TATTCCAGT----CCATTTACTGATAAATTAAATAAATTATGATACCTTATTGTCCCCTTGTACTTCCCCGAGTCTCTGTTGAAGCTCCCTAATCTCTTCTCCTAGATGTTTGTTTTGATCTTGAGCCTCACTCAGTAGTTGAGTAAGATTTGCCTAGAA-------------AAGAAGTATCAGTCAAAAGTTAGTGCCTATGGAGACAAGCGCAAGTGG-TGATTGCAAAGCAACACTAGGCTT ......:..:x:..-...:......x..:x.---x.:.........:.:.---------......:.x..x..x:.......:xx.x.......--.................:::.::...................:.:..x....:.............................----------..::.......xx:....:x.--....:.::...:.:x..xx..:::.-.x.:...xx...---------.....x.:..----..x:...:...:x.x.::x........:x.x:x..x.--------------..::.....xx.xx:.:...-.x.:....x..------------------------...:xx...xx:.x...:x:..x.::x.:..----------.x...:...x.--...:.x:xx.:.:x....xx.:x:x:..x:::x.....:.x.:.:--.x....x:.xx:..:x...:x...-:.x::.:.:.xx..:.:::..------------------:.:x..:...----.x....x.x...x.x..:.x...:.x:x....x..::...x.---------------------....-..::...x...x.:.x.-----...-.:..x...:----.:x:..x.:x:.....------.x.:.:::......:.....x..:..x.....:..:..:..:..:.....:..::....:........:........:...:.:..:....xx..x....:......x.:......x........-------------.x...:..-..:...:..----------......--------:.....-...x....::..xx..:.:..... 14M1D16M3D16M9D35M2D82M10D21M2D25M1D12M9D10M4D37M14I20M1D11M24I31M10I11M2I45M2I24M1I21M18I10M4I42M21I4M1D17M5I3M1D9M4D16M6I125M13D8M1I9M10I6M8I6M1D24M 489/710 68.9% 836/94230402 0.0% 188/710 26.5% 6758698 NA +3104 chr4 + 190214555 24853587 24853586 24853622 36 CAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAT chr4 - 94230402 87676346 87676345 87676381 6554022 6554021 6554057 36 CAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAT ................:.:................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -62822759 -31407643 +5553 chr4 + 190214555 24865273 24865272 24865460 188 CCATACCTTCAATATAGGAAAGTACTAGATTA-AGCAAGAATACATTTAAAAAATGTTTGATGAAACATCAGGGGTTCTTGAGAGGTGTGATTGACAGCAAATTTAATTGCAATTTCTACTCTGCTGCTTTGGTCTGATGGTGACTCCTGTGTTAACAGTAATAGAGTGAAACTTGCTTTGCTTAGCAA chr4 - 94230402 18104198 18104197 18104375 76126028 76126027 76126205 178 CCACACCTTCAAACAAAGAA--CACTGAGTTGTAGGACAGATGGA---AAAAAAAGTGTGATGAAACATTAAGCACACGTGATTGGTGTGACTGATAGCAAATTTAATTGCAGTTTCTCCCGCAGTGCCTTTATATGATTGCAGTGGCTGAAT------TAATACAGAAAAACCTGTTTTGCTTACCAA ...:........xxx.:...--:...:::..:-..x.x::..:x.---......x..x...........:.:.x::x.x...xx.......:...:................:.....x.:x::x...:..x:.x....x.::::xx...x:.------.....x..x:....:..:........x... 20M2D10M1I12M3D105M6D30M 122/177 68.9% 178/94230402 0.0% 12/177 6.8% 6761075 NA +3370 chr4 + 190214555 24866791 24866790 24866862 72 AAAAAAAAAAAAAAATATACACACACACACACCCACACACACACACACACACACGTGCATATATATTGATTG chr4 - 94230402 87372728 87372727 87372799 6857604 6857603 6857675 72 AAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTG ..:.:.......xx..x.x..x..........xx.........:x:.:..::.:..:.:........xx... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -62505937 -31724465 +5876 chr4 + 190214555 24873651 24873650 24873737 87 AAAAAATCTGAGATCAGAAATAAGTCTTACCTGTTTCCTTTTTTCAGGAGGAAGTGATGGATCTCCATCCTACAAAGAAACAAATGC chr4 - 94230402 18110152 18110151 18110238 76120165 76120164 76120251 87 AAATAATGTCAAATGAAAAATAAATCCTACCTGTTTCCTCTTTTCAGGGGGAAGGGATGGATCTCCATCCTACAAATAAACAGATAC ...x...x.x.:..x.:......:..:............:........:.....x.....................x.....:..:. 87M 73/87 83.9% 87/94230402 0.0% 0/87 0.0% 6763499 NA +3028 chr4 + 190214555 24874231 24874230 24874283 53 TCCTATTAGATTTGTTTTTTTTTTTTTTTGTTTTGTTTTTTTTTGTTTTTTTG chr4 - 94230402 35056080 35056079 35056132 59174271 59174270 59174323 53 TCCAGTGGGATTTGTTTGTTTGTTTCTTTGTTTTGTTTCATTTTTTTTTTCTG ...x:.x:.........x...x...:............:x....x.....:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -10181849 -84048553 +3073 chr4 + 190214555 24876278 24876277 24876353 76 TATACATACACACGTACACACACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGA chr4 - 94230402 8395799 8395798 8395874 85834529 85834528 85834604 76 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA .:.:....x...:...:x:...:.:::.::.x:...:xx.:.................x.....:.x::.x.:.:. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 16480479 NA +13664 chr4 + 190214555 24876530 24876529 24876713 184 ACTTACAATCAGCTCTCGGTACTTCTTCTTCAGTGACTGGTGGCGCTCCCGGAGCTGATTGGCCATGAGTTTGTACTGGTCCCTTTCCTGTTGACAGGTGTCCAGCTCCTTGGAGAGGATCAGCAGGGCTTCCTTCTTACTCTCCAGCTTCCTCTTACACACCAGGTACTGCAAAGCAAACAAA chr4 - 94230402 18110730 18110729 18110913 76119490 76119489 76119673 184 ACCTACAATAAGCTCCCGGTACTTCTTTTTCAGAGACTGGTGTCGTTCTCGTAACTGGTTGGCCATGAGCTTATACTGGTCTCTTTCCTGTTGACAAGTGTCCAGCTCTTTGGAGAGGATCAGCAATGCCTCCTTTTTACTTTCCAGCTTCCTCTTGCACACCAGGTACTGCAGAGGAGAAAAA ..:......x.....:...........:.....x........x..:..:..x.:...:...........:..:........:..............:...........:................:x..:.....:.....:..............:................:..x.:.x... 184M 158/184 85.9% 184/94230402 0.0% 0/184 0.0% 6765800 NA +23708 chr4 + 190214555 24877898 24877897 24878516 619 TCTAGTATTATTCACATATGTGAAATGTGGCACTAAATACCTTTGGAATTTGCCCTGTAAAAGACCAAAT-TCAGAGCATTCATGAAAACAATTTATAGTTTCATTATACACTCTGACATGAGTACTTTGTCATTATGGACGCTCACACAAAGCAGAGCGAGAATCAGCACTCCCATTCCACTGGAGTCAATGCTCTT-TTATGGACAAAAAGCATTACTCATATATAGTGCTTGCTAGGAACTGACTTTGTTAAGTTCAATTTCAAATAAATGAAAGGGAGAAAAAGAGAGTTTTGTGCA----TTTGCACAATTTTTTTTCCTAAAAAAAAAAAAAAAAAAAAAAGAAAGTAATTGCTTAGCTTCAAAAA---CAAAGGGGAA--AGAAAAGGCATTCTGAGACGGATTTGAGTTCTAAAAAAGGACACTTCCACCTTGGATGAATTTTATTCCTGGCAGTAATGAGGTTGGAATCCTGCCTTAAAATGTCCTGGATTTTGAGACGTTGACATCGTCTTCATGGAGGCAAA-ATGGTTCTGT-----TG-CCACAGTGATTTCT----CAAGAGTAAAATCCCCAATGAGTAAATATCAGAGGAGAGTGGCTCAGAAACCCAAACTGCAGTGTCCTCAG chr4 - 94230402 18111832 18111831 18112433 76117970 76117969 76118571 602 TCTGATGTTACTCACAT----GAGATGTGGCACTAAATACATTCTGACTGTGCTCTGCAAGAGACCAAATATCACAGCATTCATGAAAACAATTTATAGTTTCATTACGTACTCTGACAAGAATACTTTGTCATTATGGGCTCTTGCACAAAGCAA---GAGCATCAGCACTTCCACACTCTTCAAGTCAGCACCCTTCTTCGGGATAAAAATCATCACCCATATGCAGTACTTACTTGGAACTGACTTTGTTAACCTCAATTTCAAGGAAATAAGAGAGGGAAAG-GAGAGTTTAGTACAGCACTACAGACAACATTTTCC----------------------AAAATCGCTAAGTGCTTAGTTGCAAAAAAGTCGAAAGGGAATGAGAAAAGCAATTCCAGGAAGGATTTGAACTCTCAAAAAGGACACTTCTACCTTGGATTAATTTTATTTCTGGCACTACTGAAGTTGAAATCCTGCCAT-AAATTTTCTGGATTATGATGCCTTCGCATCAACTCTACAAAGGCAACTGTAACTCTGTACTTATGTCCTTACTGATACCTTACACAAATGTCAAGTCCCC--TGATAAAACAC----GGAAAG-GCATCAGAAG-CTAAACTTTAATATTGTCAG ...::.:...:......----..:................x..:x..x.x...:...:..:.........-...x................................:::.........x..:................:.x..::.........:---...x.........:...:x.:x:.x:.....:::.:...-..xx...:.....x...:..:.....::...:...:..x.................x:..........:x....:.:..:.:....:-........x..:..----.x::x....:x....::----------------------...:xx:x...x.......:.x......---.:..:.....--.......xx....:::..x........::...x..............:.........x.........:......x..x...:....:.........x.-....x.:.......x...x:.x..x:....:x..::.:::......x-:.:::.....-----..-..x:.x....x:..----...:x..x..:.....--...xx...:.:----...:..-.xx......:-.:.....x:.:.:.:x.... 17M4D49M1I85M3D39M1I87M1D14M4I17M22D28M3I10M2I98M1D47M1I10M5I2M1I14M4I16M2D11M4D6M1D10M1D20M 442/580 76.2% 602/94230402 0.0% 61/580 10.5% 6766066 NA +7952 chr4 + 190214555 24878269 24878268 24878516 248 GGGAA--AGAAAAGGCATTCTGAGACGGATTTGAGTTCTAAAAAAGGACACTTCCACCTTGGATGAATTTTATTCCTGGCAGTAATGAGGTTGGAATCCTGCCTTAAAATGTCCTGGATTTTGAGACGTTGACATCGTCTTCATGGAGGCAAA-ATGGTTCTGT-----TG-CCACAGTGATTTCT----CAAGAGTAAAATCCCCAATGAGTAAATATCAGAGGAGAGTGGCTCAGAAACCCAAACTGCAGTGTCCTCAG chr4 - 94230402 18113678 18113677 18113929 76116474 76116473 76116725 252 GGGAATGAGAAAAGCAATTCCAGGAAGGATTTGAACTCTCAAAAAGGACACTTCTACCTTGGATTAATTTTATTTCTGGCACTACTGAAGTTGAAATCCTGCCAT-AAATTTTCTGGATTATGATGCCTTCGCATCAACTCTACAAAGGCAACTGTAACTCTGTACTTATGTCCTTACTGATACCTTACACAAATGTCAAGTCCCC--TGATAAAACAC----GGAAAG-GCATCAGAAG-CTAAACTTTAATATTGTCAG .....--.......xx....:::..x........::...x..............:.........x.........:......x..x...:....:.........x.-....x.:.......x...x:.x..x:....:x..::.:::......x-:.:::.....-----..-..x:.x....x:..----...:x..x..:.....--...xx...:.:----...:..-.xx......:-.:.....x:.:.:.:x.... 5M2I98M1D47M1I10M5I2M1I14M4I16M2D11M4D6M1D10M1D20M 178/239 74.5% 252/94230402 0.0% 22/239 9.2% 6764591 NA +6771 chr4 + 190214555 24887124 24887123 24887392 269 GCTTTTATCTGCCCTAAAGCAAATCATAATTGCTACAACAAAGATCAAAAGATCATAATAATTAAATGGCTATCT--GACATACTACATTACTATTTGGGTGGCTTTATAGCCAGATAGCTGCTGCTGAGAGATGAAGGTAGCTGGGGTGTAGTGGGGGTGGGGT----GGGGGGCGGGGATGGGGTGCAGTCACTTCTTGCCAAAGACTC----CTGGTCCTTCGCGATTTTTACTAATGGGATCAGTCTAGCTCTCATTAGCCACCGCAAGGGCATG chr4 - 94230402 18115390 18115389 18115649 76114754 76114753 76115013 260 GCTGTTATCTGTAATAAAGCAAATTATAATTGCTACAA--------GGAAGATCATAATAATTAAAGGAATATATATGACATCCTACATTACTGCCTGAACTGCTTTACAGCCAGATAACTACTTTAGTGAAA----------TTGAGTAAAAAGAGACTGACATTACAGGAGAGTGGAGCTGCTCCAAGGTGACTCTGCATCAAACACTTACTATTTGTCCACTGCTATTTTTAGCAAT-AGATCCGGACAGATCTCATTAATGGCACCACAGACATG ...x.......:xx..........:.............--------::..................x.:x...x.--.....x..........:::..:::x......:.........:..:..x:x.x..:.----------.x.:..:x.:x.:.:x..:x:.----..:.:.:..:.x..xxx::x:..x...::x:::....x...:----:.x....x::..x.......x:...-:....x.xx:..x........::x:.xx..x:.:.... 38M8D29M2I56M10D22M4I42M4I25M1D38M 167/250 66.8% 260/94230402 0.0% 29/250 11.6% 6771734 NA +6285 chr4 + 190214555 24912665 24912664 24913127 463 CCTGGCGGGGTCGCGCGGGTGCGGCAGCCGCGGCCACTTGGAGTGCGCGCCCCCCTCTCGTCCCTCCCAGCTCGGCCT--------CTCTGGGGGCGCGGGCCCGGGGCTGGCGGCCGC----------TCGGCCCGGCCCATCCCGCCTGGCCGGCGCCGCGGCCTCACCTCGCTCACCAGCCCCTGCCAGTCGCTCTCAGTCCGGTCGCCGTTCATGGCCTCCTCCTCCATGCGCTGGCCGGCCTCCTGGACCCCCGCCGCCTCCTCCTCCTCGCGACGTCGCGTCGCCGCCGCCGCCCGGGCCCCGCGCGGCCCCGAGAGGGCCCGGCGCCT--CCGAGCCGCTGCGCCGCCGCCTCTCGCGGCCGCCAGCGCTGTTGACTCCACGTC----AGCCTCCGCCGGAGGGAAAGGGAGGAGGGGCGCGGCCGCCGGGGCCGCAGACACAGCCCGGGCCGCAGCCGAGCCCCGCCGGGCCCGCCCCG chr4 - 94230402 18121848 18121847 18122237 76108166 76108165 76108555 390 CCTGGCAG---CGCATGG---CGGCAGCGGCCCGCAGCTGGAGC----------------TCCCCCGCACCGCGGCCTGCCCCTCACCCGGCAGGGCCGGACCCCGGGCCAG--GCCGCGATGGGGAGGCAGGGCCGCCCCATGCCCTC---------CCGCCGCCTCACCTCGCTCACCAGCCCCTGCCAGTCGCTCTCGGTGCGGTGGGAGCTCATGGCT--------------CCGGCGGGCGTAc--ggcgccgagcggctccgcc---------cgccccggcgcggccTTCCGCCGAGCAGCCCGCGG---GGAGAGG---CGGGGCCTGGCCGGGCCGCGGAG-CGGAGCCT----GGGCCGC------------CTCCGCGCTCTGAAGGTGCCGTGCAAGGTCGGGCGTGGCAGGGCA-GGGCGCCGGGG--------GCAGCCTGGG-------CGCGCACAGCCAGACCCGCGCCG ......:.---...::..---.......x..xxx..x:.....:----------------....:.x..x.x......--------.:.x.x:..xx...:...x....::.--.....----------:x..x...x.....x..x:.---------....x.....................................:..x....x.xx.:.......:--------------.:...x...x.x.--.:.x..x:x..x....x..---------..:.x..x...x...x:.xx...:..xx.x.....---x......---...x....--...:.....x.x.-..xx....----x......------------....:..::----..x:x...:xx:...xx::.x.x..x:....:-..x........--------:.....:...-------..x..x.x...:.:.....x... 8M3D7M3D23M16D18M8I26M2D5M10I20M9D64M14D13M2D19M9D35M3D7M3D8M2I13M1D8M4D7M12D9M4I32M1D11M8D10M7D23M 268/366 73.2% 390/94230402 0.0% 121/366 33.1% 6790817 NA +16870 chr4 + 190214555 24947744 24947743 24948153 410 AAAAATTAAAAAGCCAGTAAATTACCTTCCAAG-ATTCAATCTGAGTTTAGAAAATTCATTACAATGAAAAAAGA----AGGAGGATTTTTTTTTTTATTGCAGATAGTTAGTGGCATTGATGGATTATGGCAGAGCCATCCGCAATATGGCCAAATAATTTCACTGGAGAGGATTTTATATAGCTACAGCTAAAATTCAATGAACTGATTCAGAAGACTCAGTATAAAATATAACAGTGACTTCGAGTGCCAAATCAATTTGGGGGCTTGAAGGGATAGGGAGAG----------CCTTCGTTCCCTCCCTGTTCATGGACGTTACTTTAACTGGAACTGTAAATTCACAGGCGTAGGAGTGGCAGGCAGTGGGCTACGGCAGGTGATTTAAGAAACCTATCCTGAAAAATCAGAAAGTGGTTG chr4 - 94230402 18131223 18131222 18131639 76098764 76098763 76099180 417 AAAAATTAAAAAACTAGTTAATTATACTCCTAGTGTTCAACAGTGGCTTTAGAAATTCACTGAAATGAATGGAGAGTAGAGGGAGATTTCTTT----ATTACTGGCAGTTAGTGGCATTGATGGATCACAGCATAGCCATTCTCAGTATGGCCAAATAATTTCACTGTATAGAATTTTATATAGCTACAGCTAAAATTCAATGAACTGATTCAGGAGGTTCAGTATAAACTATAACAATAAGTTAAGCCCTTAAATTGATTTGATATTTTAAAAGGATAGGGAGCAGCAAGATGCTCGCTCATGTCGTCTTCTTTCACAGATGTAACTTTAACTGGAACAGTAAACCCG-AGGCAGAATATTGGGGGATAAGGGTATGTAATGCGTGATTTA--AAACCTGTCCT-AGAAGTCAGTGAGGATTTG ............:.:...x.....:x:...x..-:.....:xxx:.:..x::.......:.:x......x::...----...::.....:...----...:.x.::....................:.::...x......:.x..:.....................x.x..:.........................................:..::..........x.......:.:.x..x::x:x::....::.....:x:x:..:..:..........x:----------.x:..:.x:.x..:::x....::..:..x..............x.....::.:-....:x.:x.x...x:.::.:x..xx.::::::x........--......:....-.:..:....x:..x:x... 33M1I41M4I14M4D189M10I53M1D42M2D11M1D19M 290/402 72.1% 417/94230402 0.0% 23/402 5.7% 6816521 NA +3017 chr4 + 190214555 24952610 24952609 24952648 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -44485129 -49745273 +3088 chr4 + 190214555 24975312 24975311 24975380 69 AGGGAGGCAAGACAAAAGGAGAAGGGGGAAGGAGAGGGAGGGGAGGGGAGGAGAAGGCAGAGAAGAGGA chr4 - 94230402 59863339 59863338 59863407 34366996 34366995 34367064 69 AGGTAATCAAGATTCAAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAA ...x.:x.....:xx...:.:..:::..::..:.....:........:.......:.x.x.:..:x.:. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% -34888027 -59342375 +3185 chr4 + 190214555 24985939 24985938 24986035 97 TCTCTAAGGACCCTTCCAGATTGATTTCTATATGATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGC chr4 - 94230402 13493040 13493039 13493127 80737276 80737275 80737363 88 TCCTCAAGCATACCTCTAAATAGATGTTTACTTGGTTTTGTCCTTTTTTTTTTTTTTTTTTTG---------CTTGTGGTTTCCTAGTTTGGACTAC ..:::...x.:x.:..:.:..x...x.:..:x..:....x.::....................---------..:.:x..:x..:..x:....x.:. 63M9D25M 60/88 68.2% 88/94230402 0.0% 9/88 10.2% 11492899 NA +3164 chr4 + 190214555 24985961 24985960 24986013 53 GATTTCTATATGATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTC chr4 - 94230402 2943223 2943222 2943275 91287128 91287127 91287180 53 GGTTTCTACGCAATTATCTTTTTTTTTTTTTTTTTTTCCTGAAATTGAGACTC .:......::::...x.....................::...:.:x...x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 22042738 NA +57523 chr4 + 190214555 25003157 25003156 25004295 1139 GGGGGGGAAGCATATTACATTTCTAGATGATAAGAGTAA-------ATGCTGTACTCTTTTCTCAGAAATTACAGGCTTTAAGATTTTTTTTTAAATGGTAGAATGGGCATGTCATGCAGTTAGCCAATAAATGCAATCCCTGATTAAAATGTGAGTTCTAAAAGTTTGAAAA----CATCTAACTATTTCAGTGCTTTTTAATTTCAGAGCTCTGAGCCTGGCTTTGATTTGTTTGTTGATTTTTCTTGGTCCTCTTTTGTGAGAGCTAATGCTACATTTCTCTTAGTTTCAC-CCACCACACCTTCACAAACTTAAGTCAACAATTATATGTTCAAAAATCTTTGTTTTCCCTTTGAAACTGGATGCAAAAAAGAAATCTCTCCTGTCGGTGGAGACAGCTGTGAATGAACGAGGCGCCTGCACGTAAATCTCCTTAAACTTTTTGAATAGCTGCTTCTCTTTATCCCACTGGTATATCTGAGAGAATGTATAGTCACTCCCCAGGGCCAGGTAGTGATTATCTTTAAAAGAAAAGGGCTGCAGGGTCATGGCCCCCCGGGATGGAAGAGCTTGGATCTCCACAAACTGCTTACTGTTCCACCTCATGACCCGGGAGTCCCCGATGAAGCGGGTAAGGGAAAGGTAGAGGGTATTTTGCATTCGGAAGCTCTTCACAGCCAGTACGTCCTCCATGTTGGGGATGTCACCATGGGGGACAAACTTCTTAGAGCTTTTATTCCACTGGAGGATGATGGGGACCTGGGAGCGGCTGGACAGGATGAGATGCGATTTTCCATCGATATCAACAAACTCCGCATCCGTGTCCCTGAACCACTCGTGCAGTGACTGGTAAGAATAGAATCCTTTGCTGTTCCATTTATAAACTGTGGACAGACCAGCCTTTGAGCTGTCTGCGATGACAAAGAACGTCTCGTCGTCGATCTGAAACAGCTCGATGTCATTGGGCTTGGAAATGCGAGAGACCTCTATGTCTTGGAATTTGACAAATTTGGTCCAACTCTCGTCGTATTTGTAAATGTGAGAGCCACCGAAGAGCTGGGCTACCACCACAAAGACCTGATCATCGATGAGAATGGCCTTACAGCCCACGATGGACTGACCTGTGCTCCAAAATAAAGGAGAGGACA chr4 - 94230402 18154076 18154075 18155191 76075212 76075211 76076327 1116 GGGTAGAATTCAGATCATTCTCTGAGACATCAAGATTAATCCTAATGCACTGCACTCTCCTCTGAATGGCTGCAGGTTGCAAAGTGTCTTTGAAAAAGATAAAACAGACATGTCATGCAGCAATCAAGTAAATGCACTCCCTGATTAATATGCAAGTTTTAAAAGTTCAGAAAATGTCATCATACTCCATAGGTGCACCCTGCTCTTGGAA-----AG---GTCTCTGTTTTGCTTGTATAT---------------------AAATGTCATTCTACAGG------AATTTCATTCCAGCAGCTTTTCATAAACTCAAGTCAATGATTACATGTTCAAATATTTGTGTGTTTCCTTTAAAACTAGAGGCAAAGAAAAAATCTCTTCGATCCGTTGACACAGCTGTGAAAGAACGTGGCGCTTGCACATAGATTTCTTTAAATAGCCTAAAGAGCTTTTTTTCACCATCCCACTGGTATATCTGGGAGAAGGTATAGTCACTTCCCAGGGCTAGGTAGTAATTATTCTTAAAGGAGAAAGGTTGCAGCGTCATGGCTCCTCGGGATGGAAGAGCCTGTATCTCCACAAACTGTTTGCTATTCCATTTCATAACTCTGGAGTCCCCAATGAATCTTGTGAGCGTTATGTACAGGTTGTTTTGCATCCTGAAACTCTTCACTGCCAGGACATCTTCCATGTTGGGGATTTCACCATGTGGGACAAACTTCTTTGAAGCTTTGTTCCACTGGAGTATAATGGGAACCTGCGAGCGACTAGAGAGGATCAAATGTGATTTCCCATCTATATCAAGAAACTCAGCATCGGTGTCCCTGAACCACTCGTGAAGGGACTGGTACGAGTAAAATCCTTTGTTATTCCACTTGTACACTGTTGACAAACCTGCTTTGGAGCTATCTGCTATGACAAAAAACATTTCACTGTCTATCTCAAAAAGCTCTATATCATTTGGCTTGGAAATGCGAGATACTTCAATATCCTGGAATTTGACAAACTTTGTCCAGCTCTCGTCATACTTGTAAATGTGTGAGCCGCCAAAGAGCTGTGCCACCACCACAAAGACTTGGTCACCAACAAGAATGGCTTTACATCCCACTATGGACTGACCTAATGACCAAAGAAAAGAAAAGCACA ...x:.:.xx..x..:.:x:.::x...::x:....x...-------:::...:.....::...x.:x:::.:....:.x:..::.x.:...xx...x.:..:..::.:............:x.x.x.:........x...........x...::....:........:::...----....xx...x:x.x:....x:::.:x.:.::..:-----..---.x..:..x....:....xx..---------------------.:.xx.x..x.....xx------.:.....:-...x..xx::....:.....:.......::....:.........x..:.x...x..:.....:.....:..x.....:..:........:.x:..x..x..x...........x.....x.....:.....:..:..:..:.....:xx::.:..x....x:..:..x::..................:.....x...........:........:.......:.....::.....:..:..:..:.....x........:..:..............:..x..............:..:..:.....::....:..:.x.........:.....x.xx..:..x.xx.x...x...x.:........:.x...:........x.....x..:..:..............x........x..............x..:x:...:...........x..:.....:.....x.....:..:..x.....x.:...:.....:.....x.......x......x.....x....................x..x........x..:..:.........:.:.....:..:..x.....x....:...x..:..x.....:.....x........:...:.:..:::...x....x...x.....x..:.....x.................x..:..x..:..:..............:..x.....:........:..:...........x.....:..:........x..:..............:..:...:.:.::........:.....x.....x............:xxxx.....:x....:.:..x... 39M7I127M4I34M5D2M3D21M21D17M6D8M1I856M 839/1104 76.0% 1116/94230402 0.0% 47/1104 4.3% 6849081 NA +13249 chr4 + 190214555 25012305 25012304 25012501 197 TCAACACATCTGATCAAAGCCACAACACACCTGTAATGTTGTCATAGCTCCGGAAATTCATTTCAATGTGGTCCCACTCCAGCACCATGCAGTTCTCCATGCTGGGCTGCGCGATGGCCACGTACACATCGTTCTTGGAGTTGAACGTATCCACTGAAACCGACTGGTAGGGTAAAGTCTGATGAACAACAAAATCT chr4 - 94230402 18157693 18157692 18157888 76072515 76072514 76072710 196 TCAACACTTAGAATCCCAGCATTAAT-TACCTGTGATATTGTCATAACTCCTGAAATTCATTTCTATATGATCCCACTCAAGCACCATACAGTTCTCCATGCTGGGCTGTGCAATGGCTACGAACACATCGTTTTTAGAGTTGAACGTATCCACTGACACTGACTGGTAGGGCAAAATCTGGTGAACAACAAAATCT .......x.xx:...xx...xx:..:-:......:..:........:....x............x..:..:........x........:....................:..:.....:...x..........:..:....................x..:...........:...:....:............... 26M1D170M 165/196 84.2% 196/94230402 0.0% 1/196 0.5% 6854612 NA +3394 chr4 + 190214555 25014840 25014839 25014879 40 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGAAAA chr4 - 94230402 87676347 87676346 87676386 6554017 6554016 6554056 40 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAA ...................................:.x.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% -62661507 -31568895 +16234 chr4 + 190214555 25017974 25017973 25018261 288 ATAGGCTCTGAATACCTGTAGTTGTGCATTCATAGTCAAAGCTGGTCACGTCATTTAGCTTCTTTTCCTGATACTCTGGTGGACCAATACACAGCACATCAGAAACGGTGGAATTTGTCATCTTCAACCACAGGTATAGCCACTTGGCTTTGCAGTCACATTCAAATTTATTACCCCTCAAATCTCTAAAAATCAAAATAAAACACAAACACATACAAAGAGAAATAGATGTGTCTGACATGTTTTGGTAGTAACACGAAACTCCAGAATTATTAACATCCTGATATA chr4 - 94230402 18161957 18161956 18162222 76068181 76068180 76068446 266 ATACATTCTGAATACCTGTAGTGGTGCATTCATAATCAAAACTTGTCACATCATTTAACTTCTTATCCTGATATTCTGCTGGACCAATACACAGGACATCAGAAACAGTGGAATTTGTCATCTTTAACCACAAAAACAACCACTTGGCTTTGCAGTCACACTCAAATTTATTTCCCCTTAAATCTCTAAAA---------------AAACACAC------AGAAATAAACATATTTGAAAAG-GTTGATAGCAATATGAATTTACAGAACTGTTAGCACTTTGACATA ...x::................x...........:.....:..x.....:.......:......x........:....x...............x...........:.................:.......::x.:.:.....................:...........x.....:............---------------.......:------.......:.::.:.:...x.x.-x...:...:..:.:...x:.x.....:.:...:..:::...:... 191M15D8M6D22M1D45M 220/266 82.7% 266/94230402 0.0% 22/266 8.3% 6856017 NA +8263 chr4 + 190214555 25019154 25019153 25019280 127 TTTCATTACTTACAGTTCAATCAGAGAGTCTAAATCACTGAAGACATCCCTTGGTAGTGCTTTTATGTGGTTATTGGCCAAAGAACTAGAACAAGAAAGTCACATTGCAATGTGATTATTATCTCAT chr4 - 94230402 18163191 18163190 18163316 76067087 76067086 76067212 126 TTTCATTACTTACAGTTCAATTAGAGAATCTAAATCACTGAAGACATCCCTTGGCAGAGTTTTCAGATGGTTATTGGCCAAAGAACTAGAA-AAGAAAATTAGAGCTTAATATCATTGTTACATCAT .....................:.....:..........................:..x.:...:.x:........................-......:.:.x.x:x:...:.x...:...:x.... 91M1D35M 106/126 84.1% 126/94230402 0.0% 1/126 0.8% 6855963 NA +6931 chr4 + 190214555 25024814 25024813 25024925 112 ACTTACAGGTGAGTCAGGTCACGGAGGCCACGAAAGGCATTTCTTGAAATGGTTTCTATTTTGTTCCCTTCAATGAACCTAAGAGGAAAAGTTGTATAATTAAAATGAATTT chr4 - 94230402 18163814 18163813 18163925 76066478 76066477 76066589 112 ACTTACAGGTGGGTCAGGTCTCGAAGGCCACGAAACGCATTTCTTGATATGGTTTCAATTTTGTTTCCTTCAATGAATCTAAGAAAAAAAAAAAAGTACTTTAGAAGACTTT ...........:........x..:...........x...........x........x........:...........:......::....:xx:x:..x..x.:.x..x... 112M 91/112 81.2% 112/94230402 0.0% 0/112 0.0% 6861000 NA +6212 chr4 + 190214555 25028499 25028498 25028612 114 ATACTCACAGCAGCTGCAGAGAAGGCAGATGGGAAAACATTCGGTCCTTGATTTCTGAAAACGTCCCATTTACCAGGCTCCTACGGGCAAAAGATGAACAAAAGTAGGCCTAGG chr4 - 94230402 18171058 18171057 18171168 76059235 76059234 76059345 111 ATACTTACAGCAGCTGCAGGGAAGGCAAGTGGGAGAACATCCTGTCCTTGACTTCGGAGAAGGTCCCGTTCACCAGGCTCCT---GGCGGAGGGAGAGAAAAGCCAGGGCTGAG .....:.............:.......::.....:.....:.x........:...x..:..x.....:..:...........---...::.:.:x..:x...:x:...x..::. 82M3D29M 85/111 76.6% 111/94230402 0.0% 3/111 2.7% 6857441 NA +3627 chr4 + 190214555 25041229 25041228 25041363 135 CTTTTAGCAGTAATTTTTCTCTTTTTCTCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTTTCTTCCTTCCTTTCCTTCTCTCTC---TTTCTTTCT chr4 - 94230402 34857716 34857715 34857850 59372553 59372552 59372687 135 CTTTTATTACTA---TTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCT ......x:.x..---...::.:....x.:x..::........::...:x.::..:.:x.:x..x..x..x.....:...::x..x..:x..x...::xx:x..:.........x.:x:.::.:...---..x...... 12M3D111M3I9M 84/132 63.6% 135/94230402 0.0% 6/132 4.5% -9816487 -84413915 +3059 chr4 + 190214555 25041234 25041233 25041325 92 AGCAGTAATTTTTCTCTTTTTCTCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCT chr4 - 94230402 16226706 16226705 16226797 78003606 78003605 78003697 92 AGGAGTAGTTCTCCTGTTTCATTCCTTCCCTGTTTTTTACTTGCAAACCTCATTTTTTTTTTTTTATTTTTCTTTTTAGCATTTTTGCTGCT ..x....:..:.:..x...:x:.......:.x:..::.x.:.x.xxx...:x:.:...:.....:x........::.xx.x.....x..x.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 8814528 NA +3730 chr4 + 190214555 25041242 25041241 25041396 155 TTTTTCTCTTTTT---------CTCCTTCCTTTCTTCCT-TCCTTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCTTTCTTTTTTTCTTCTTCCTTTCTTCCTTCCTTTCCTTCTCTCTCTTTCTT----TCTTGCTTTTTTTTTTTTGTTTTTTTTTTTGTTTTT chr4 - 94230402 34857650 34857649 34857818 59372585 59372584 59372753 169 TTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTT ....:.....x..---------..::x.:x.........-.:x..x:..:.:..:.x..x...x::.....x.:x::x...::::....x..x..::........::...:x..::.:::x.:x..x..----.:..x.:....x..x..:...x:...:xx....... 13M9I17M1I89M4I36M 98/155 63.2% 169/94230402 0.0% 14/155 9.0% -9816408 -84413994 +3566 chr4 + 190214555 25041255 25041254 25041377 123 CTCCTTCCTTTCTTCCTTCC---TTCCTTCCTTTCTCTTTCTTTTTCTTTTTTCTTCCT-----TTCTTTTTTTCTTCTTCCTTTCTTCCTTCCTTTCCTTCTCTCTCTTTCTTTCTTGCTTTTTTTTTTT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTG------TTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ....:.:.:...x.x....x---.x.:x...:.:..:..:......:..:.:..x:...-----...:x...:xx....xxx:....x------....:..........:...:.x.x....:..:...:. 20M3I36M5I24M6D37M 81/117 69.2% 125/94230402 0.0% 14/117 12.0% -18040645 -76189757 +17262 chr4 + 190214555 25088717 25088716 25089147 431 CTGCTTCGCTCCGCAGC-ATCCCCGCTCAGGAACCGCAGATGCGCC-CAAATGTTCCAAACCCG---CGCGGGG----CGGGGGCTCATTTGTATGCCGCACCCTGGATACAAGTGATAAGGCCCCAAACACTCCAAGGAGACCGCACAGATGAAACCCGGCGCTGCTCGCTCAGGAGGCGAGATATTTATAGAATCCAAATATCAGCATTTTCTCCCCATTTACACAAAGCAATTTCAGCCTTTTCA---GATGAGAAAAGAGCAGCCCCGGCCGTCATTCATTCGGGT-GCGGGAATCACAT-TTGGGACCAGGAAGCCCTGATTTTATAGGAAACCTCGAGGCAGGCTCGGATTAAAGATCAATGGCGACATAAAATGTGGGCTGTCATATTTTCGCTCTGAACATGTCCTGGTAATAAAAAATGTTGTTTTAGTAAATAAA chr4 - 94230402 18181297 18181296 18181731 76048672 76048671 76049106 435 CTGCTGCATTCAGTAGCTACTCCTGCTCAGGAAATGCACAACAGTCACAAATGCTGCACAGATTGGTTGCTGGGTAAACTGTGGCTCATTTGTATTCAGCACCCTGCGTAAAAGTGATAAGAAGCCAAATACTCCTAGGAAACAGCACAAATGAAATACAGCACG-------CAGGAGGCAAAGTATTTATAGAAACAAAATATCAGCATTTTCCACACATTTACACAAAGCAATTTCAGTCTTTTCATAGGAAAAAAAAAGAACATCTCTGGCACTCATTTATTCATTTCCCTGCAGTCATATATTTTGGCCAAAAAGCACTGACTACATAGAAAACCTTCAGGTCACAGCAAATTAAAGATCAATGACAACCCAAAATAGATGCTGTCATATTTTCACTCCTAACATGTCTTTGTAATGAGCA---TTGTTTCAGTAAGTAAA .....x.::..x.:...-.::..:.........x:...x.xxx.:.-......:.x..x.xx:x---:..x...----.x.x.............x.x........x:..x..........:xx.....:.....x....:..x.....:......:x.:..:.x-------........:.::...........x.x................:x.x......................:.......---..x:.:......:..x.:.:...xx.....:....:xx.-x.x.x.:...:..-..xx.:...::....x....:.x:....:......:x...:x:xxx.::..............:.:..x:.....:x:x..............:...:x........:.x.....:.:x.---......:.....:.... 17M1I28M1I17M3I7M4I87M7D76M3I39M1I13M1I120M3D17M 312/421 74.1% 435/94230402 0.0% 24/421 5.7% 6907420 NA +17262 chr4 + 190214555 25088717 25088716 25089147 431 CTGCTTCGCTCCGCAGC-ATCCCCGCTCAGGAACCGCAGATGCGCC-CAAATGTTCCAAACCCG---CGCGGGG----CGGGGGCTCATTTGTATGCCGCACCCTGGATACAAGTGATAAGGCCCCAAACACTCCAAGGAGACCGCACAGATGAAACCCGGCGCTGCTCGCTCAGGAGGCGAGATATTTATAGAATCCAAATATCAGCATTTTCTCCCCATTTACACAAAGCAATTTCAGCCTTTTCA---GATGAGAAAAGAGCAGCCCCGGCCGTCATTCATTCGGGT-GCGGGAATCACAT-TTGGGACCAGGAAGCCCTGATTTTATAGGAAACCTCGAGGCAGGCTCGGATTAAAGATCAATGGCGACATAAAATGTGGGCTGTCATATTTTCGCTCTGAACATGTCCTGGTAATAAAAAATGTTGTTTTAGTAAATAAA chr4 - 94230402 18178105 18178104 18178539 76051864 76051863 76052298 435 CTGCTGCATTCAGTAGCTACTCCTGCTCAGGAAATGCACAACAGTCACAAATGCTGCACAGATTGGTTGCTGGGTAAACTGTGGCTCATTTGTATTCAGCACCCTGCGTAAAAGTGATAAGAAGCCAAATACTCCTAGGAAACAGCACAAATGAAATACAGCACG-------CAGGAGGCAAAGTATTTATAGAAACAAAATATCAGCATTTTCCACACATTTACACAAAGCAATTTCAGTCTTTTCATAGGAAAAAAAAAGAACATCTCTGGCACTCATTTATTCATTTCCCTGCAGTCATATATTTTGGCCAAAAAGCACTGACTACATAGAAAACCTTCAGGTCACAGCAAATTAAAGATCAATGACAACCCAAAATAGATGCTGTCATATTTTCACTCCTAACATGTCTTTGTAATGAGCA---TTGTTTCAGTAAGTAAA .....x.::..x.:...-.::..:.........x:...x.xxx.:.-......:.x..x.xx:x---:..x...----.x.x.............x.x........x:..x..........:xx.....:.....x....:..x.....:......:x.:..:.x-------........:.::...........x.x................:x.x......................:.......---..x:.:......:..x.:.:...xx.....:....:xx.-x.x.x.:...:..-..xx.:...::....x....:.x:....:......:x...:x:xxx.::..............:.:..x:.....:x:x..............:...:x........:.x.....:.:x.---......:.....:.... 17M1I28M1I17M3I7M4I87M7D76M3I39M1I13M1I120M3D17M 312/421 74.1% 435/94230402 0.0% 24/421 5.7% 6910612 NA +3153 chr4 + 190214555 25096006 25096005 25096123 118 GCTAAAGGGCTCCTGCTCCATCTG--CATCATTTCCGAGGCTGTCATTCGG--------------CGTGACATGTGTGCGCCGGGCCTCTCGCCGCCATCTGGCAGCCTCTTGGAAATCACAGCTCCCCCTGCA chr4 - 94230402 32396580 32396579 32396703 61833700 61833699 61833823 124 GTTGGAGGCCTCTTTCTCAACCTGTGCATCAT----------GTCTTTCAGTTTTTGTAGAAGCACGGGATATATTTGAGGTTGGCTTCTCCCTGCCCTCTGCCAACCTCTCTGAGCTCACAGCTCCTTCTCCA .:.::...x...:.x...x.:...--......----------...x...:.--------------..x..:..:.x..x.x:x...:....x.:...x....x..:.....:x..:x..........::..x.. 24M2I6M10D9M14I69M 77/108 71.3% 124/94230402 0.0% 26/108 24.1% -7300574 -86929828 +3850 chr4 + 190214555 25099091 25099090 25099287 197 AGAAAGTGAGAGAAAGAGAGAAAGAAGAAAGAAGGAGAGAAA----AAAGAAAGAGAGAAAGAAAGAAGAGGAGAAAGA-----------AGGAAAAGGGAGAAAGAAAGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 56098338 56098337 56098548 38131855 38131854 38132065 211 AGACAGTGAGA-AGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA ...x.......-.::..x:..:.x..x....:..:x.x.x:.----.x.x.:....:x:.:.x::.x.:..:......:-----------:......:.xx.:....:xx:::xxxx...x::...:..x.:...:xx:.....x.:...::...:....:..:.:x:....:::.:...:..:xx..:....xxx.....:...xx..x.. 11M1D30M4I33M11I122M 117/196 59.7% 211/94230402 0.0% 16/196 8.2% -30999247 -63231155 +3030 chr4 + 190214555 25099105 25099104 25099158 54 AGAGAGAAAGAAGAAAGAAGGAGAGAAAAAAGAAAGAGAGAAAGAAAGAAGAGG chr4 - 94230402 299362 299361 299415 93930988 93930987 93931041 54 AGAAAAGAAGCAGCAGGAAGGAAAGAAAAAATAAAGGGAGAGAAAAAGCAGTGG ...:.::...x..x.:......:........x....:....:.:....x..x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 24799743 NA +4892 chr4 + 190214555 25099114 25099113 25099255 142 GAAGAAAGAAGGAGAGAAAAAAGAAAGAGAGAAAGAAA-GAAGAGGAG------AAAGAAGGAAAAGGGAGAAAGAAAGAAACGAAAAA-AGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAA chr4 - 94230402 44053988 44053987 44054137 50176266 50176265 50176415 150 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ......x.:......:.:.......:....x..::...-.::....x.------:.....:....:::..x...:.x::.x..:..:..-........x:.x:x.....x:::x::.x....:.......:.:::x..x....x...... 38M1I9M6I35M1I60M 97/142 68.3% 150/94230402 0.0% 8/142 5.6% -18954874 -75275528 +3363 chr4 + 190214555 25099118 25099117 25099280 163 AAAGAAGGAGAGAAAAAAGAAAGAGAGAAAGAAAGAAGAGGAGAAAGAAGGAAAAGGGAGA-----AAGAAAGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAA-AGAAAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAA--------GAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..:.:.x:x.x...:..x.:.:....:.:.:..::.:...:x:.:.:..x.:::...x:.:-----..........--------...::x..:..x...x.x...::.x........x:.x:x...::x:.:x:..x.:.::.::....:.:..x.:x..:.-...... 61M5I10M8D78M1I6M 93/155 60.0% 161/94230402 0.0% 14/155 9.0% -18954859 -75275543 +3773 chr4 + 190214555 25099149 25099148 25099299 151 AAAGAAGAGGAGAAAGAAGGAAAAGGGAGA---AAGAAAGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAA----GAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAA-GAAAAGAAAAGAAAAGAAAGAGAA chr4 - 94230402 18962240 18962239 18962398 75268005 75268004 75268163 159 AAAAAAGGGATGCGATATTGAGAAGGGATGTTGAAGAATTAAATGAATAACTAAAAAGAGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAA ...:...:.:x.x:.x.xx..:......x:---.....xx...:...x..xx...:.:..:.x...:x...x::.x.----.:..:....:xx::.:x...:......x:.:..:x....:...x..xx..x..-....:.....x....x.....x.. 30M3I44M4I53M1I24M 99/151 65.6% 159/94230402 0.0% 8/151 5.3% 6136909 NA +3095 chr4 + 190214555 25099159 25099158 25099225 67 AGAAAGAAGGAAAAGGGAGAAAGAAAGAAAC-------GAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAA chr4 - 94230402 65614384 65614383 65614457 28615946 28615945 28616019 74 AGCAAAAGGAAAAAGGGAGAGAGTAGAAAACACAGAATGACAAGTGAAGCAAAGGAGAAAAAGAAGAGAAAGAA ..x..:.:.:..........:..x.::....-------..x..:x...:x....:.::.......:........ 31M7I36M 50/67 74.6% 74/94230402 0.0% 7/67 10.4% -40515225 -53715177 +3155 chr4 + 190214555 25099168 25099167 25099253 86 GAAAAGGGAGAAAGAAAGAAACGAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAA chr4 - 94230402 78894959 78894958 78895044 15335359 15335358 15335444 86 GAAAAGGCATCAGTAATAAAACAAACAAACAAAAAAAGCACAGAAAGAGGAGGAGGAAGAAAAGAGAGTACGAAGTGAAAACAGAA .......x.xx.:x..x:....:..x...x...:....x.x::.....::..:.:...::.....:..x.x...:x::.:.x.... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% -53795791 -40434611 +4194 chr4 + 190214555 25099192 25099191 25099306 115 AAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA------GAGAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAGAAAGCAAAA chr4 - 94230402 30533164 30533163 30533284 63697119 63697118 63697239 121 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA ...x.:....:.............:::..:.......xx.x:.:....x..------:...x.....xx::..x....:.:x:.:.....:..:......x.xx:.....:::.:.x.x.. 51M6I64M 78/115 67.8% 121/94230402 0.0% 6/115 5.2% -5433972 -88796430 +3601 chr4 + 190214555 25099198 25099197 25099269 72 AAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....:.:.x..x.:...:x.::..x.::.::.:..:.:............x........... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 32213 NA +3333 chr4 + 190214555 25099207 25099206 25099306 100 AAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAA------AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAGAAA-GCAAAA chr4 - 94230402 44053989 44053988 44054095 50176308 50176307 50176414 107 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAA .....x:..::.........::...:.::x......:x.:.:.:.x:------:.::.......::.:.x:....x:..x:x......x.......:x..-...... 47M6I47M1I6M 67/100 67.0% 107/94230402 0.0% 7/100 7.0% -18954782 -75275620 +3106 chr4 + 190214555 25103762 25103761 25103814 53 CATTCTTCCTTGCTTTAAAAAAAAAAAAAAAAAAAAAAAAGCCTG--GACTGCAA chr4 - 94230402 86413717 86413716 86413771 7816632 7816631 7816686 55 CATAACTCCTTGCTTTAAGAAGAAGAAAAAAAAAAAAAAAGCCCACTGACTTCAA ...xx:............:..:..:..................::--....x... 45M2I8M 44/53 83.0% 55/94230402 0.0% 2/53 3.8% -61309955 -32920447 +3059 chr4 + 190214555 25111813 25111812 25111864 52 GAGACCATTGTTATTATCCCCATTTCACAGATGAGGAAACTGAGGTGTAGAG chr4 - 94230402 88912171 88912170 88912222 5318181 5318180 5318232 52 GAGACCTGTAGCATCATCCCCACCTTGCAGATGGGGAAACTGAGGTGTGAAG ......xx.:x:..:.......::.::......:..............::.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -63800358 -30430044 +14124 chr4 + 190214555 25121720 25121719 25122092 373 AATAATAAAAACCACAGCTGATTTTCT---GCATCAGGAATGAAATATTGTAACATATCTATCATTCACATGTGAGTTCATGTAATTTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACTGCAGATGAGAAAACATTTGCTACTCTCCCAGCTCTGGCCTTTCTTAAGCTAAATGATGATCACAACAATATAGATCACTTGTTCTATAAAACAATTTTGGCTTACATGTATAGCAAGCTGCACTGCCAGCATTTACATTTGCAACA--ACATTTCAATCCCTTTTTTGACTCTAGAG-----GTTGCAACTCTTCAGCTTTATTGGTTCAGCAATTTAGTCCCAAATTCTCATGAA chr4 - 94230402 18192265 18192264 18192619 76037784 76037783 76038138 355 AAAAGTGAAAACAGCAACTCCGTTTTTAAAGCATCACAAACAAAGAGCTATAGCCCATCTCTCACCCACATATGGATTCGTGTAATGATTCTTCAATTAGAATTATTATCTATACAGCAGCTGAAGACTGAGAACTGCTGATACACTGCAGATGAG--AACATTTGGTAGTCTCTGGGCTCCAGCCTTTCTTCAA--AAATGATGATCGC-ACAATATAGATCGCTCGCT------------------TTATATGTGTATTAAGCTGCAATGCCAGCATTTACATTTGCAACATTACAGTTT--TGCTTTCTTAGGCTCAAGAGAATTTGCTGCATCTGGTAGCTTTTATTTGCTTTGTATCTGAGGC---AATCGTTATGAA ..x.:.:.....x:..:..xxx...:.---......x:..::..:x::.:..:.x:....x...::.....:..::...:......xxx.x......................x............x.::..........................--........x..x....:x:....::.........x.:--...........:.-............:..:.:.------------------...:....:..x:........x.......................--...x..:--.x.:..:..x.:...x....-----.:....x..xx.x:x:......x.:.:x.:.x:.x..x.---...:x.:..... 27M3I126M2D37M2D13M1D19M18D45M2I7M2D20M5I39M3D12M 262/345 75.9% 355/94230402 0.0% 38/345 11.0% 6929455 NA +12773 chr4 + 190214555 25124028 25124027 25124242 215 TCACTCTCTTTACTTCGTTCTTTTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCATCTTCATTCCGATGGCTGATGCAGCATTGAGGTAAGCACAAGGGTAATTATTTGTATGTGACATAAAGCCTCTGAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGAAAGAAGAAAGATT chr4 - 94230402 18196493 18196492 18196706 76033697 76033696 76033910 214 TCACACTTTTTTCTTT-CCCTTTCCTAGAAGCCTTCAAACACTTGTCCAGTCTTTTTAGGAAGATGTCTACGTCTTGCTTTTTAATTCCGATGGCTGATGCAGCATTGAGGTAAGCACAGGGGTAGTCATTTGTATGCGACATAAAGCCTTTGAAAGTGTAGTTATTCACTGTTTGCACAGACCCACGGGGAACAACTCTGAAATAAACAGAATT ....x..:...x...:-::....:..x:xx.....:......:....x.....:....x...x.x...:..:..:...x.:..x...................................:.....:.:.........:............:.......:...::.:....x.......::......x.:..x.....:......x..:x.::... 16M1D198M 169/214 79.0% 214/94230402 0.0% 1/214 0.5% 6927535 NA +6006 chr4 + 190214555 25125683 25125682 25125801 119 AACATACTTACCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTCATAGCTGAAAAAGAAAAAAGT chr4 - 94230402 18198752 18198751 18198870 76031533 76031532 76031651 119 AGCATTCTCACCTCGCTCCTGAAACTTGTCTTGTAAAAAGCATAGATCCAAGCTGGGTCACAGCAGCATCATTATTTTCATCTAGATTCTTCAGTGACATGGCTGAAGTAACAAAAGGT .:...x..:....x.....x.....:.....x...........x..x........:..x.....xx::...:x:.x.........xx.:..x....x...:......:x.:x....:.. 119M 89/119 74.8% 119/94230402 0.0% 0/119 0.0% 6926931 NA +6518 chr4 + 190214555 25127258 25127257 25127371 114 AATTACCTAAAGATATGGGATTGTGAGGTGTATGCAACAGTCTTTCATTGTAGGCTTCTGACAACTTCTTTATTTGGTTGGACAAATATGAAAACATTTCCTGCAACAACAAAA chr4 - 94230402 18199524 18199523 18199637 76030766 76030765 76030879 114 AATTACCTAAGGATATGGGATTATGTGGTGTATCCAACAGTCTCTCATTGTGGATGTCTGCCAACTTCTTCAACTCACTTGAAAGATAGGAAAACATTTCCTGGGGGAAAAAAA ..........:...........:..x.......x.........:.......:.::x....x.........:.x:.x::.x..x.:...x..............x::x..x.... 114M 89/114 78.1% 114/94230402 0.0% 0/114 0.0% 6927734 NA +4153 chr4 + 190214555 25130856 25130855 25130946 91 GTTAAATCTATAACTGGCATTTATTATAAAATACTTCTGTAAAGAAAGAAATTTATAAGCAACCCAAGCAAATGTATATAGA-AAGATCTTA chr4 - 94230402 18201772 18201771 18201863 76028540 76028539 76028631 92 GTCAAATCTATAACCAACCCCTATTACAAAACATTTCTGTTATGTGGACAATTTATAAGCACCCTCAGCAATTATATACAAATAAGCTCTTA ..:...........:::.x::.....:....:.:......x.x.x:::x............x..:x.....x.:....:.:.-...x..... 82M1I9M 66/91 72.5% 92/94230402 0.0% 1/91 1.1% 6929084 NA +12642 chr4 + 190214555 25132215 25132214 25132612 398 AGATGAAATAACCTCTAAAAATATCATTGTGGTGAATAAGGGCATAGAATGAAAAAAATTCT--AAGTTTTCTTCTAACATTCCTTTTTTTAGTACACAATAACACCAATAATATAAAAAGGAGCTCTCAGTGATGGTATATAAATAGCTCTGGCTG-GAGCAAAATAGCTTTGCCTCAGCTTCTCCAGAGCTGAACCAATAAACTATCACAATTAAATTTTCACAGTTCAAAAGCAAGTCCATTTAAACAAAAGA-GGCCCTTATTTCTGCAACAAATCCAATAAAAAAACAATATTTATGCTACATATATGCAATTATGGTTTATGGAGGACATCCACATTTTTCAACAGAGAAACCTGCCTACTAAATGAAGTTGTTAAAAAAGCAAACTTTAACTTAC chr4 - 94230402 18205437 18205436 18205816 76024587 76024586 76024966 380 AGCTCAAGTAACCT---GAAATAACATTA--GTGAATAAGTATAAAAAGTGAAATAAATACTGGAAGTTTT-TTATAGCTGACTTTGTGTGAGTAGGTG-TAACTGAACCAATATAGAAAGGAGTACTCCGTGTCAACCTATAAATAGCTCCTGCTGAGAGCCTAATAGCTCTGCCTCTGCCTTCACAGAGCACAGGCAATAAACTATCATTATTACATTTTTACAATTCAGGAACAAACACATTTAAGCAAAAAAAGGTTTCTATTTCTGCAGCAAATCCAATAAAAGGAACATATTTATGC--CATATATAAGGCTAT-GTTTATAGAGTATACTCACACTTAAAATAAAACAGACC-----------TGAAATTG-TAAAAATGTAATGTTTTATTCAC ..x.x..:......---:.....x....:--.........x::.x.:.:.....x....x..--.......-..x..:.xxx.:..x.x.x....x:::-....xxx.x:......:.......:x...x...x::::x............:x....-....xx.......:......x..:.::x......xx.:x.............:x....x.....:...:....::.:...::x.......:.....:.-..::::..........:..............::.xx..........--.......:x:::...-......:...x.:.::....:..xxx.xx.:.x.:...-----------....:...-......x.:..xx...x.:.:.. 14M3D12M2D31M2I7M1D27M1D57M1I98M1I46M2D15M1D38M11D8M1D23M 271/376 72.1% 380/94230402 0.0% 26/376 6.9% 6926778 NA +16894 chr4 + 190214555 25144765 25144764 25145173 409 AAAGCTTACCTTTCTTTCTTTTAGTAGCTTCTTATAGCCATTTGATCCAAGTGACAATAAAGTAATAAGGACATCTAAAGAAGGTGAAGCTGAAGCTCTTCCTGAAATAAGAAGGATAAGTTACATTAAGACTGTGGTGGGGGGGTAGCTTTGGAAATTAAGATTTACTACAATAGC-CTATGTAC--AAATGGATTTTTGTTTGTT----AGCTACTTTTTCTGAA---AAGCAACTTAT---TTATTTACCTGGATACATCTTGCTGATTTCCTGAATGAATGAATCATTAAAGCCAGCAATTATAGCACCACCTACTGGAACCATAAAATTTTTGTCCAAGCTCTGAACAAAAGCATCTATTCTACCAACTCGAGCCCCCT-----GGAATCAATATGATATTACATATTAGTTGCTAGGAAAA chr4 - 94230402 18207140 18207139 18207565 76022838 76022837 76023263 426 AAAGCTTACCTTTCTTTCTTTCAGTAACTGTTTGTAGCCACTGGCACCTAGAGACAGAAGCGTAATGAGGACATCTAAAGAGGGAGATGCAGAAGCTCTTCCTGaaa-aagcaaagtaaaacaaaacaaaagaaaaatgaaaagattaagtttaaaaaaaaaaacaaaaacaaaaatgatatgaaagaaaaTTGATAATTGAGTTTTCTACAGTTACTTTGTATGGATGAAATCAATCCGTGAACTACTTACCTGGATACATTTTGCTGATCTCCTGAATGAAGGACTCACTGAAGCCAGCAATGATAGCACCACCTACTGGAACCATAAAATTTTTGTCCAAGCTCTGAACAAAAGCATCTATTCTGCCTACTCGAGCACCCTTTATCAAAAGGAATAAAAAAATCCACAGCACACATTAGGAAAA .....................:....:..x:..:......:.x.xx..x..x....:x.:x.....:..............:..x..x..x................-...x.:::...:x:.x.x:..:.xx:x::..::::.:.x:xx..x:...xx..:.x:x.xx....x.::-x....x.x--....x...xx...xx.x..----..:......x.x..:.---..x...::::.---:..:..............:........:...........x..x...:.:...........x..............................................................:..x........x....-----::..xx....x:.x.x.x..:.x:.xx:::........ 107M1D69M1I8M2I19M4I16M3I11M3I140M5I38M 302/408 74.0% 426/94230402 0.0% 19/408 4.7% 6937625 NA +3466 chr4 + 190214555 25149254 25149253 25149342 89 TGGAGTCTTGCTTTGTTGCCCAGGGAGGTCTCAAACTCCTGGCTTCAAGTGATCCACAAGCTTCAGCCTTCCAAAGTGCTGGAATTACA chr4 - 94230402 18197114 18197113 18197192 76033211 76033210 76033289 79 TGGCATCATGTTCTACAGCCCA----------AAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ...x:..x..:.:.::x.....----------..:..:....x........x.:....:.x:........:...:xx.......:.... 22M10D57M 58/79 73.4% 79/94230402 0.0% 10/79 12.7% 6952140 NA +9396 chr4 + 190214555 25151932 25151931 25152111 180 ACATACATATCATTTTAAACTC-----TCTTACCTGCTGAATGAGATGCATACACTTTGAAGACTGCACTCCATAAGCATTATTAACTATATGTGGAATGTCATAATTAGCACAAATCACAGCCAGTTCTTCTAATCTATAAACATAAATATTCAATAGAAAGACATACTCA-CACTGTGTTTTAT chr4 - 94230402 18209586 18209585 18209770 76020633 76020632 76020817 185 ACATATATAT-ATTTGAAATGCGTAGTTCCTACCTGCTGGATAAGATGCATACATTTTGAAGATTGAACTCCATATGCATTGTTGACAATATGGGGAATGTCATAATTAGCACAAATTATAGCCAATTCCTCCAGCCTATGAGCATAAAATTGTAATTTAGAGAAATACTAGTCACTGTAATCCAT .....:....-....x...:x.-----..:.........:..:...........:........:..x........x.....:..:..x.....x.......................:.:.....:...:..:.::....:.:......xx.x:...xx.:...x.....x:-......:x.::.. 10M1D11M5I145M1I13M 141/179 78.8% 185/94230402 0.0% 7/179 3.9% 6942346 NA +11210 chr4 + 190214555 25154987 25154986 25155193 207 AAATCATTTACCTATCAGGCACCCTTGGAGCAAAACAGGATGTAGTAGAATGAATACACAGAATGCAATCAGGCCCAAGTTCCTGGACTTTAGCCTCCACTGCTTTCAGGTCTGTACGCAGCTCGTCACCTTCCAAAACATTTTCTATCACCACAGGCTCAAAACCTAACCAAACCAACCAGAAAACAAAATGTTAGTGTGAACTAA chr4 - 94230402 18213211 18213210 18213410 76016993 76016992 76017192 200 AGACTACTTACCTATCAGGTACCCTTGGAGCAAAGCAAGATGTTGTAGAATGCACACAAAGAATATTTTCAGCACCAAGAGTCTTGATTTTAGCCTCCACTGCTTCAATATCTGTCCGTAGCTCATCACCTTCTAATACATTCTCTATCACCACAGGCTCAAAACCTAACCAG-------CAAAAACAAGATCCAAATGTACATCAA .:.::.:............:..............:..:.....x........x.:...x.....::xx....xx.....xx:..x..:.................:x.x:.....x..:.....:........:..x.....:.............................:-------x:.......:..x:x.:...:x.::.. 173M7D27M 156/200 78.0% 200/94230402 0.0% 7/200 3.5% 6941776 NA +13871 chr4 + 190214555 25156012 25156011 25156250 239 ACATTATGTA-----TGACACTTCTCTTACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAATATACTTTGCCTTTGGTCTTTTGTGTCGTAATGTTAAGAAACACAGAGTTAGACTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCTACAAAT-AAGAAGCAAAACAGAAATCTGTTATCCCGCTAAGCACCCAGCATCCT chr4 - 94230402 18214434 18214433 18214674 76015729 76015728 76015969 241 ACACCATGTAACCAGTCATCCCCCTATTACCTGCAGTTATCATCGATTTAAAGCAAGATTTCTGGTCTATACGTGGCCAAATAATGTACTTTGCCTTTGGTCTCTTGTGCCGCAATGTTAAAAAACACAGAGTTAGACTCATGCCAGTTGCCATAGGAACCACAAAGCAATTGGTCACTGTCCGGACACCTGCACGTGAAAAAGTAAGTCAGAAA----TTAACATGAAGAACACACAACATTTT ...::.....-----.x.:x.::..x...........x.....x...........:..:...........x........x.....:.................:.....:..:........:....................:.................:........:....::.....x:........:..x:.-..:...:..:x......----...x.x:.xx:.:...x..:...::. 10M5I182M1I17M4D26M 191/235 81.3% 241/94230402 0.0% 10/235 4.3% 6941578 NA +8852 chr4 + 190214555 25156850 25156849 25156998 149 ACATACCAGCCAGCTTTATAATGTCCAGGACCAAAGAATTGGTAATTTTGTTCAAAAGGCTAGAGCCTGCAGCTTTTGGTTGCACAGCAGAAATATCACCGGATCGTCCAATGCCATGAATGAACCTAAGCAAAAAATGGGCCAAAAAC chr4 - 94230402 18214703 18214702 18214849 76015554 76015553 76015700 147 ACCTACCAGCCTGCTTTATAATATCCAGAACGACTGAATTAGTAAGCTTGTTCAAAAGGCTAGACCCTGCAGCTTTAGGCTGGACTGCAGAAATATCTCCTGATCTTCCAATTCCATGGATCAACCTGAACAAAAAA--GGTTGAAAAC ..x........x..........:.....:..x.xx.....:....x:.................x...........x..:..x..x...........x..x....x......x.....:..x.....:.:.......--..:::..... 137M2D10M 121/147 82.3% 147/94230402 0.0% 2/147 1.4% 6942147 NA +10434 chr4 + 190214555 25158950 25158949 25159130 181 TACCTGTAATGACGACGAGCAACCAGTGCGGATGCCACTCTCCCTTCCCTTTCTCCCACACCACAATTGCCTAAGAAATTGTTGCTGTCCATGATTGCAAGTTCATGTAAAAAGAGTTCAAGTGTACTTTCATCCCAGCCATTCTCTGGACACTTGCCCTTAAAAAAAAAAAAAAACTTAT chr4 - 94230402 18216385 18216384 18216565 76013838 76013837 76014018 181 TACCTATAGTGCCTTCGGGCAACAAGTCCTGAAGCCACTCTGCCTTCCCTCTCTCCCACACCACAGTTGCCCAGAAAGTTATTGCTGTCCATTATGGCAAGTTCATGAAGGAAGAGTTCAATGGTGCTTTCATCCCATCCATCTTCAGGGCACTTTCCCTTAATAATAATAGAAAGATAAT .....:..:..x.xx..:.....x...x.x..x........x........:..............:.....:.::..:..:...........x..x...........x.::..........xx..:...........x....::..x..:.....x.......x..x..x.:...:x.x.. 181M 142/181 78.5% 181/94230402 0.0% 0/181 0.0% 6942565 NA +3232 chr4 + 190214555 25191290 25191289 25191330 41 AAAACAAACAAACAACAACAACAACAAAAATCCCAAAATTT chr4 - 94230402 49190520 49190519 49190560 45039843 45039842 45039883 41 AAAACAAACAAACAACAACAACAACAAAACTCTTGAAATTT .............................x..:::...... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -23999230 -70231172 +3112 chr4 + 190214555 25199042 25199041 25199118 77 CTGCAACCTTCGCCTCCCAGCTTCAAGCGATTCTCATGCCTCAGCCTCCCAGGTAGCTGGGATTTCAGGTGTGCAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.::.x......:.x...x..x.x........::..:........:.:.x..x...::.x.. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 7001916 NA +3157 chr4 + 190214555 25205053 25205052 25205132 80 TATATATATACATGTACACACACACACATATATACACACACACACACATACACACACACACACACACACACACATATATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:...:.:::::..x...:::.:x:.:....::.::.x:...:xx...................x.....x..:x... 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 16809262 NA +3219 chr4 + 190214555 25205053 25205052 25205130 78 TATATATATACATGTACACACACACACATATATACACACACACACACATACACACACACACACACACACACACATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:.:.:...:x...:::.:x:......:..::.x:...:xx.:.:...............x.....x.::x... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 16809260 NA +3338 chr4 + 190214555 25205054 25205053 25205134 81 ATATATATACATGTACACACACACACATATATACACACACACACACAT--ACACACACACACACACACACACACATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:..::...:..:.x...:::..x..:.:.:::.::.x:....--.:.................x.....x..:x... 48M2I33M 55/81 67.9% 83/94230402 0.0% 2/81 2.5% 16809266 NA +3261 chr4 + 190214555 25205056 25205055 25205115 60 ATATATACATGTACACACACACACATATATACACACACACACACATACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.x:::..:::.....::::..:....:...xx.........:............. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 10240231 NA +3056 chr4 + 190214555 25215892 25215891 25215935 44 TGGGTTTTTCTTTTTCTTTTTTTTTTTTTTTTGGAGATAGAGAG chr4 - 94230402 22616721 22616720 22616764 71613639 71613638 71613682 44 TGGGGTTTCCTTATTCTTTTTTTTTTTTTTTCAGGGATAGAAAG ....x...:...x..................::.:......:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 2599171 NA +3586 chr4 + 190214555 25216863 25216862 25216945 83 CTGCAACCTCCATCTTCCAGGTTCAAGTGATTCTCTCGCCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCACCCATCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x....::..........x...x.xx.x........::............::....--.::x..:...::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 7019737 NA +3499 chr4 + 190214555 25240799 25240798 25240892 94 CTGTCCCTC--------TTTCTTTCTGACTCCTTCTCTTTGTCACTTTCTCTTTGACTCTCTGTTTCTTCCTCTCTCTGTCTCCTTCTCTTTGTCTCTCTGT chr4 - 94230402 43081925 43081924 43082026 51148377 51148376 51148478 102 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGT .........--------...:.....xx.x..:..:x.x.x:..:..:xx:.:...x::..........:........x....:x.xx...:x...:..... 9M8I85M 66/94 70.2% 102/94230402 0.0% 8/94 8.5% -17841126 -76389276 +3157 chr4 + 190214555 25250528 25250527 25250583 56 TGCTTAATACCTGAGTGATTGCTTCTCTGTCTTTTGGCTAAGATCAAGTGTAGTAT chr4 - 94230402 56292864 56292863 56292919 37937484 37937483 37937539 56 tgcttaaTTATTATTCCATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAGTGT ........xx:.:xx:x..........xx:........................:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -31042336 -63188066 +3719 chr4 + 190214555 25251899 25251898 25251977 79 CTGCAACCTCCACCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGAATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx.x..:.::.:........x...x.xx.x.........:.:...........:....x...--...... 71M2D6M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 7054773 NA +9594 chr4 + 190214555 25252338 25252337 25252579 242 GAGATGAATGCATTCTTGGATGACCCAGAATTTGCCGATATTATGCTGAGAGCAGAGCAAGCAATAGAAGTTGGAATTTTTCCAGAAAGAATCTCTCAAGGTTCAAGTGGAAGTTACTTTGTGAAGGATCCTAAGAGGGTGAGAATTTCACAGACCTATTATATGTAATGGAAACTTTGGTAAATACTAATTT-AAATATGAAATCATTGTGAGTTTCTAAAGATATTTTCCTATTAAGTCTG chr4 - 94230402 18225697 18225696 18225923 76004480 76004479 76004706 227 GATATGAATACATTTTTAGATGATCCAGAATTTGCTGAAATTATTACGAGAGCAGAACAAGCTATAGAGTGTGGAGTTTTGCCGGAAAGAATCTCTCAAGGATCCAGTGGGAGTTACTTTGTGAAGGACTGTAAGGGGGTGAGCA------AAGTGTTTTGAATG---CGGAGTCTCTAACAATAGCTAGTTTAAAATGAGAAATTTCTATTTCTGTTTAAAA-------CCTTTTAAGTATG ..x......:....:..:.....:...........:..x.....xx:.........:.....x.....:xx....:....x..:.................x..x.....:.................::x....:.......x.------.:::x.x..:x...---:...:x..:.:::..xx:...:...-....:x.....:x:.:.xxx.x.:....:-------...x......x.. 145M6D14M3D25M1I29M7D13M 168/226 74.3% 227/94230402 0.0% 17/226 7.5% 7026641 NA +9472 chr4 + 190214555 25252338 25252337 25252579 242 GAGATGAATGCATTCTTGGATGACCCAGAATTTGCCGATATTATGCTGAGAGCAGAGCAAGCAATAGAAGTTGGAATTTTTCCAGAAAGAATCTCTCAAGGTTCAAGTGGAAGTTACTTTGTGAAGGATCCTAAGAGGGTGAGAATTTCACAGACCTATTATATGTAATGGAAACTTTGGTAAATACTAATTT-AAATATGAAATCATTGTGAGTTTCTAAAGATATTTTCCTATTAAGTCTG chr4 - 94230402 18223245 18223244 18223471 76006932 76006931 76007158 227 GATATGAATACATTTTTAGATGATCCAGAATTTGCTGAAATTATTACGAGAGCAGAACAAGCTATAGAGTGTGGAGTTTTGCCGGAAAGAATCTCTCAAGGATCCAGTGGGAGTTACTTTGTGAAGGACTGTAAGGGGGTGAGCA------AAGTGTTTCGAATG---CGGAGTCTCTAACAATAGCTAGTTTAAAATGAGAAATTTCTATTTCTGTTTAAAA-------CCTTTTAAGTATG ..x......:....:..:.....:...........:..x.....xx:.........:.....x.....:xx....:....x..:.................x..x.....:.................::x....:.......x.------.:::x.x.::x...---:...:x..:.:::..xx:...:...-....:x.....:x:.:.xxx.x.:....:-------...x......x.. 145M6D14M3D25M1I29M7D13M 167/226 73.9% 227/94230402 0.0% 17/226 7.5% 7029093 NA +3163 chr4 + 190214555 25253120 25253119 25253181 62 TAAACCTTCAAAAGTTGTTTAATGTCATTTCCAAAGTACTTGATTTTTTTTCAAAGGTATGT chr4 - 94230402 37368240 37368239 37368301 56862102 56862101 56862163 62 TAAATCTGCAAAAGTTGTTCAAGATTCTCATAAAAATACTTGATTTTTTTTCTGAGATTTGT ....:..x...........:..x:.:x.:x:x...:................x:..:.x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -12115120 -82115282 +13373 chr4 + 190214555 25255052 25255051 25255269 218 TTTTTTGCTCTAGAAAATTATTGGTGTGTTTAAACCCAAATCAGAAGAGCCTTATGGTCAACTCAATCCAAAATGGACCAAATATGTCCATAAGGTCTGCTGCCCTTGCTGCTTTGGCCGAGGCTGCCTGATTCCTAATCAGGGGTACCTTTCCGAAGCGGGTGCCTATCTTGTGGACAACAAGCTTCATCTGAGCATTGTACCTAAAACAAAGGTAA chr4 - 94230402 18230602 18230601 18230819 75999584 75999583 75999801 218 TTATTTATTCTAGAAAACTATTGGAGTGTTCAAACCAAAATCTGAAGAGCCTTATGGACATCTAAATCCCAAGTGGACCAAATATTTTCACAAAATATGTTGTCCTTGCTGCTTTGGCAGAGGCTGCCTTGTTCCAAATCAGGGCTATCTCTCTGAAGCTGGTGCCTATCTTGTAGATGACAAGCTGGGGCTAGGAGTTGTACCCAAAACTAAAGTAA ..x...::.........:......x.....:.....x.....x..............x..x..x.....x..:............x.:..:..::.x..:..:...............x..........x:....x........x..:..:..:.....x..............:..::.......xx:x..::.x:.......:.....x..:.... 218M 174/218 79.8% 218/94230402 0.0% 0/218 0.0% 7024450 NA +13626 chr4 + 190214555 25255052 25255051 25255269 218 TTTTTTGCTCTAGAAAATTATTGGTGTGTTTAAACCCAAATCAGAAGAGCCTTATGGTCAACTCAATCCAAAATGGACCAAATATGTCCATAAGGTCTGCTGCCCTTGCTGCTTTGGCCGAGGCTGCCTGATTCCTAATCAGGGGTACCTTTCCGAAGCGGGTGCCTATCTTGTGGACAACAAGCTTCATCTGAGCATTGTACCTAAAACAAAGGTAA chr4 - 94230402 18233993 18233992 18234210 75996193 75996192 75996410 218 TTATTTATTCTAGAAAACTATTGGAGTGTTCAAACCAAAATCTGAAGAGCCTTATGGACATCTAAATCCCAAATGGACCAAATATTTTCACAAAATATGTTGTCCTTGCTGCTTTGGCAGAGGCTGCCTTGTTCCAAATCAGGGCTATCTCTCTGAAGCTGGTGCCTATCTTGTAGATGACAAGCTGGGGCTAGGAGTTGTACCCAAAACTAAGGTAA ..x...::.........:......x.....:.....x.....x..............x..x..x.....x...............x.:..:..::.x..:..:...............x..........x:....x........x..:..:..:.....x..............:..::.......xx:x..::.x:.......:.....x....... 218M 176/218 80.7% 218/94230402 0.0% 0/218 0.0% 7021059 NA +9319 chr4 + 190214555 25256534 25256533 25256682 149 TGTTTCTAGGTGGTTTGGCTTGTCAGTGAGACATTTAACTATAATGCGATTGACCGTGCAAAATCAAGAGGCAAAAAGTATGCTTTAGAAAAAGTGCCAAAAGTGGGTAGAAAGTTTCATAGGATAGGACTCCCTCCTAAGGTAAGTTT chr4 - 94230402 18234751 18234750 18234899 75995504 75995503 75995652 149 TGCTTGAAGGTTGTGTGGCTTGTCAGCGAGACCTTTAATTACAGTGCAATAGATCGTGCGAAGTCAAGAGGAAAAAAATATGCTTTAGAGAAAGTGCCAAAAGTTGCTAAAAAATTTAATCGAATTGGACTACCTCCTAAGGTAAGATT ..:..xx....x..x...........:.....x.....:..:.:...:..x..:.....:..:........x.....:...........:..............x.x..:...:...x..x.:..x.....x..............x.. 149M 121/149 81.2% 149/94230402 0.0% 0/149 0.0% 7021783 NA +12074 chr4 + 190214555 25259022 25259021 25259194 173 TTCTTAAAATTATAGATTGGTTCCTTTCAGTTATTTGTTGAAGGTTACAAGGAGGCTGAATATTGGCTTAGGAAATTTGAAGCTGACCCTTTGCCTGAGAATATTAGAAAACAATTTCAGTCACAATTTGAAAGATTAGTTATTTTGGATTACATCATCAGAAATACAGGTAT chr4 - 94230402 18236197 18236196 18236369 75994034 75994033 75994206 173 TTCTTAATGTTTCAGGTTGGCTCCTTCCAGCTGTTTGTTGAAGGATATAAGGAAGCTGACTACTGGCTCAGGAAGTTTGAAACTGATCCTTTACCTGAGAACACAAGGAAAGAATTTCAGTCACAATTTGAAAGATTGGTTATCTTAGATTATGTCATCAGAAATACAGGTAT .......x:..x:..:....:.....:...:.:...........x..:.....:.....x..:.....:.....:......:....:.....:........:.:x..:...x.........................:.....:..:.....::................... 173M 144/173 83.2% 173/94230402 0.0% 0/173 0.0% 7022825 NA +3441 chr4 + 190214555 25260572 25260571 25260687 116 AAAAGGAAATTGACCATAAGGTAAGGAAATTTACAATTTTATATATATATATATATATATATATATATATACACACACACAC--------ACACACACACATACACACACACACGTGTATATAA chr4 - 94230402 8395749 8395748 8395871 85834532 85834531 85834654 123 AAGTGGAATTTGTACATACAG-AAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ..:x....x...xx....x:.-...:.....:x.x.xx::..:.:.:...:.:.::...x.:..:...x....:.:::.::.--------.:.........:.......x....:x:.:x.... 21M1D60M8I34M 75/115 65.2% 123/94230402 0.0% 9/115 7.8% 16864823 NA +3056 chr4 + 190214555 25260607 25260606 25260678 72 ATTTTATATATATATATATATATATATATATATATACACACACACACACACACACACATACACACACACACG chr4 - 94230402 48167034 48167033 48167105 46063298 46063297 46063369 72 ACCTTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .::..:.......xxx:......:......x.:.....::x...::::.x..:......::.....:::.:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -22906427 -71323975 +3101 chr4 + 190214555 25260607 25260606 25260668 62 ATTTTATATATATATATATATATATATATATATATACACACACACACACACACACACATACA chr4 - 94230402 10572837 10572836 10572895 83657508 83657507 83657566 59 ATTTCTTAAATATATATAGAGAAATATATATATATGCACACACAGACAGACAT---CATACA ....:x..x.........x.x.x............:........x...x...:---...... 53M3D6M 49/59 83.1% 59/94230402 0.0% 3/59 5.1% 14687770 NA +3122 chr4 + 190214555 25260611 25260610 25260672 62 TATATATATATATATATATATATATATATATACACACACACACACACACACACATACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.:..:...x..:....:...::x....:xx.:...............:.x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 16864810 NA +3161 chr4 + 190214555 25260611 25260610 25260687 77 TATATATATATATATATATATATATATATATACACACACACACACACACACACATACACACACACACGTGTATATAA chr4 - 94230402 8395799 8395798 8395875 85834528 85834527 85834604 77 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA .:.::...x.:..:...x..:....:...::x:...:xx.:.............:...x.....x.:.x:..x.x.. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 16864812 NA +3104 chr4 + 190214555 25260612 25260611 25260670 59 ATATATATATATATATATATATATATATATACACACACACACACACACACACATACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:.:xx.:.................x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 16864808 NA +3118 chr4 + 190214555 25260612 25260611 25260664 53 ATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x..:....:...::x..:..xx...................x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 16864802 NA +3255 chr4 + 190214555 25260632 25260631 25260691 60 ATATATATATACACACACACACACACACACACATACACACACACACGTGTATATAATTGT chr4 - 94230402 66904847 66904846 66904906 27325497 27325496 27325556 60 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCAT ......:..:::.........:.............:x:.x::x..x.......:...::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -41644215 -52586187 +7023 chr4 + 190214555 25263743 25263742 25263858 116 TCTATAGGAATCAAAATGGATTGATGATGAAGAATTCCTTATTAAAATAGCTGCAATTGATAATGGTCTAGCATTTCCTTTTAAACATCCTGATGAATGGAGAGCATGTGAGTATT chr4 - 94230402 18237597 18237596 18237712 75992691 75992690 75992806 116 TCCATAGGATATCCAATGGACTGTAACTGAAGAATCTACTATTAAAATTGCTGCAATTGACAATGGTTTAGCATTTCCCTTTAAGCATCCTGATGAGTGGAGGGCATGTATGTATT ..:......xx:xx......:..xx:x........::x:.........x...........:......:..........:.....:...........:.....:......:x..... 116M 92/116 79.3% 116/94230402 0.0% 0/116 0.0% 7026146 NA +10560 chr4 + 190214555 25268394 25268393 25269208 815 AAATAAACCATTTCCTACCACTGATTAGGAGAATGCTTTTTTC---TATTAGATCCATTTCACTGGGCTTGGCTTCCTCAAGCAAAAGTTCCCTTTTCTGAAGAAATAAGAAATTTGATTCTACCATATATTTCTGACATGAACTTTGTGCAAGATTTATGTGAAGATCTCTATGAACTTTTTAAGGTAAG-TTAATGCTTAGTTTGATT----ATTGCAGAAAATGAAATCTTA----AAATAGAAGAGACTGCTTAATAGAGCTGATTTGCAATTTTCTAT----TTCTTGTATTGCTGCTTGCCATAAAACCTGACAGGACAGAGAGGAATTAGCAGTTTTATTTACAGGAGCATAGATTCA--TAAAGCTATACTTACTGTGAGCATTCTTTGAAGTGAGACTACATTAAAACTTAATTTGCTGTTTTCTTCAAAAGT----TGAATTTTTACAAGAAGA--CTCTATAAATTATAATACATATTTGGTGACCTGC------TATGTTTTAGTTCTCTTAAAAAGCCTAAAT-TCATTGGCTGGAAAGT-----------CATGT--TAAATCCTTT-CTGGAACAAGTTCA---GGTCCAAATAAATAAG-TCTATTCGTGTCATTCTGGGAGTATACAAAAATACCTCAGGTAAAAATACTATTTTTGTTTTATTTTATCA-----ATTAGGAAAGCTTTTTAATGGCCTTATTTGCTGAGT-------------TGAAGAGTTCATCTGTTTTCAAATATTTATATCAAAGTCTTTATTTTGGGAATTGTTTTTTTCCTTTCTATAATAGACTGACAAAGGATTTGACAAAGCCACTTTTGAAAGTCAGATGTCTGTGATGAGGGGTCAGGTAAG chr4 - 94230402 18238061 18238060 18238871 75991532 75991531 75992342 811 AATTAAATTTTTGCCTGTTGTTAATC-TAAAAATGTTTTTTTCCTATGTTAGATCCCTTTCATTGGGCTTGGCTTTCTCAAGCACAAGTTCCCTTCTCTCAGGAGACCAGAGACTTGGTTCTTCCTCGCATCTCTGATATGAACTTTGTACAGGATCTTTGTGAAGATCTTCATGAACTGTTTAAGGTGAGAGGGATGCTTCTTTGAATTTGGCATTACTGATATACCTGTTTCATTACAAGTACAAGCTAGTTTTTGGTTTTGATTTTGTACCCTTTTCTACAAAATCATTATAT-----------ATACATAATTACAGGA---AGCTGTGTCA-CTGTTGTGACTA-AGAATAATCAGCTCATCTGAAAATCTAAATAC----------CTTTGTA-------TATAGTAAAGTTTCACATACTTGGTT------AAGTCTAGTTAATTTTTATAAAACAAATCTCTGTAA---ATGCTCCATTTAACATGGCCTCTGCAGTGTATGTACCCTTCCTACCAACGGGTCGAAGTGTTACTTATTGATACGTTCTGCTCTTACCATGTGATGAATCATTTATTTTGACATGTCTACTTACTGCAAACGATTTAGATTTCTTTGATTCATTCTGTGACGAATTGAAGCTTCCTAGGTTTATTATAATG---TTGATAGATATGACCATGCATATTATGAA-----CTTGATAAATATGCATACCAAATACACAGTTAATAACAAAGGGATCATTTCTTATAAAA---------------CTTTACTGTT----TTATGTTTTTTTTTTTAATGA-AGACTGATAAAGGATTTGACAAGGCTACCTTTGAAAACCAAATGTCTGTTATGAGGGGACAGGTAAG ..x....::x..x...:::::.:..:-x:.:....:.......---.:........x.....:............:........x..........:...x.:..:.:x...:.:...:....x..x:::..:.....:...........:..:...:.x...........::.......x........:..-xx:......xx..x:...----...:.x..x.xxxxx:.:.:.----..:..x...xx.x.x:..::.xxx.x.xx.x.:.xx.......:----.:x..:...-----------...x.xxx.x......---..xx.x:.:.-.x...x.:x:..-..:.xx..x:::...--.:..:x.x..xx...----------.....x.-------..:.x....::..x.:x.:..xxx..------....----.x........:..:.x:.--....:...---..:x.x...x.xxx:..:...x:------.....x::xx.:..x::..x::.:.x..:.-.:.:.x::..:x.x..-----------.....--.:....x...-:.xx:...x..::.---:x.x....::.x.x..-.:.x..:.xx........x..xx.xx::..:x.x...x:.x.x.xx...x.:---...x.xx..x.x.:..-----....x...-----:..:..::x:x.::x.:.::.:.-------------::...:.x....:.x..x.x...---------------.....:.x.x----..:.x.....::...:x..:.-.......:..............:..:..:.......::..:........x........x........ 26M1D16M3I145M1I18M4I21M4I44M4I9M11D16M3D10M1D12M1D15M2I15M10D7M7D26M6D4M4I18M2I8M3D23M6I30M1I16M11I5M2I10M1I14M3I16M1I52M3D16M5I8M5D23M13I23M15D10M4D21M1D67M 491/744 66.0% 811/94230402 0.0% 138/744 18.5% 7030333 NA +3098 chr4 + 190214555 25270312 25270311 25270373 62 CCCCTTTCCTCTTGTTTTTTTGGTTTTTTTTCTTTTTTTCTTTTCTTTTTTTGAGACAGACT chr4 - 94230402 53880935 53880934 53880996 40349407 40349406 40349468 62 CCATTTTCCTTTTGTTTTTTTGGGTTTTTTTTTTTTTTGCATTGCACTTTACAAACCAAACT ..x:......:............x.......:......x.x..x.x:...x::.:x..:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -28610623 -65619779 +15577 chr4 + 190214555 25276877 25276876 25277486 610 AGGTACTTATCTTCACAGTCTCTGTTGCTCATAAATGGATGAAATAAAA------ATTATAATGAATAAATGGTTTAAAAAATGTCAGTGA-AGTGAAGCTTTTTATCTTTTTAA----------ATTGGTA-----AAAATCTCTCTTCTTCCCAC------AGATCTTAAACCTTACTCAGGCATTGAGAGACGGGAAGAGTCCTTTCCAGCTAGTACAGATACCTTGTGTGATTGTGGAACGCAGTCAAGGTGGAAGTCAGGGTCGGATTGTCCACCTGAGCAATTCCTTTACCCAGACTGTCAATTGCAGGAAGCCATTTTTTTCCTCCTGGTAGT-----AAATGTCAGAGTAAGAGAAA------CAAACTGTTTAGAATTATCATGTTTTTAAAACATCATAGTAATATAAATCTGCTGT----TAGGAGCTCCAGTTGCTAAAACCTC--AATTTAAGTCTTTAAAAGGT------TGTATTTTGAATGTAACCAAAAGTTTACAGTTTTT-TGTCCAAATATTAAATTTCTATTTCAGGGAAGAAGTGCTATATCTCCTATATTGTATTTTTGTAGA--AAATT--TGTATTTTATGTTGTTGTTAGTTTAAAAGGTA-ATTTTACACATGCTGGAATGACTGTAATTACTCTAGAAT chr4 - 94230402 18241328 18241327 18241970 75988433 75988432 75989075 643 AGGTACTTCTACTTGCAGTTGATTTTTTTCTTAAATGAATTTTGTAGAAGGCTGCATTATCA--AGTAAATGG-------------AGTGATAGCTATATTTACAATCCTGTTAACCACAACTTAACTTGTATGCCCACAACTTACCTGCTTTCTACTCTTGTAGATACTAAACCTTACTCAGGCGTTAAAGGATGGAAAAAGCCCCATTCAGCTTGTTCAGATGCCACGTGTGATTGTGGAGCGAAGTAGCACTGGAAGTCAGGGCCGAATTGTTCATCTGAGTAATGCATTCACACAGACCTTTCATAGCAGGAAGCCTTTCTTTTCCTCCTGGTAGCAACAAAAATATGTGGGAGAGAGTAAGCTTCTCTAACTTCGGTAAGCTACTTCTGTGTAAAGGCTCTGCAATAATGTACTTCTGCTGTATACCAAGAGCTCCAACTGCCGTCACCTCAGAACTTAAATTCTAAAGACTTAAGAAATGTATTTTGAATGTAA-TAAAAGTTTACAATTTTTGTGTCAAAATCGTGAACTCATATGTCAGGGAATGAGAAGAACTTGTCC-ATACTGTATTTTTATAGGCTGAATTAATGTATTCTAAATAATACTCAAGGGAAGATGCACAGTTTGCATATGCTGAGA-------AACTACTTTTAAAT ........x.x:.::....:xx.x..x:..x......:..xxx:..:..------.....x.--.:.......-------------.....-..:x.x::..x:x...:.x....----------.:.x...-----.x..::.x:..x...:.:..------....x:................:..:.::..:..:..:..:..:x.:.....x..x.....:..x:.............:..x...x:x:x............:..:.....:..:.....:...x.x..:..x.....:x.:x..x..........x..:...............:-----....:.xx.:.x:....x..------.x....x:xxx:.::..::x:xx.x.x..::.x::::.:....:..xx........----:.:........::...::xx.....--..:....:.::.x..:.xx.------................-:...........:.....-....x....xx.:..:.:x...x........x:..x:xx.:x.x...-...:.........:...:--:....--......:..x:.x:.xx.:.:xxx..:.x.:.-.x...:..:......::.-------..:....:.x:... 49M6I7M2D9M13D5M1I23M10I7M5I20M6I177M5I20M6I56M4I25M2I20M6I16M1D18M1I47M1D18M2I5M2I32M1I18M7D14M 406/586 69.3% 643/94230402 0.0% 81/586 13.8% 7035549 NA +3949 chr4 + 190214555 25291416 25291415 25291554 139 TTAGGCGACAACTGGGAAGATTGTAACCCCATAGTACTCAACCAATGAGGAACTGGGGGAGGGA---------CTTGCGTGCTAGGAGATAAATTAC------CTGTTGTGACTGCCGTGGATGTGCCTGCTCACCAGACACCCAATCTTGCAA chr4 - 94230402 80808731 80808730 80808879 13421524 13421523 13421672 149 TTAGCTGAGCGTCAGGAAGATTGTGAACCTGAAGTACTCAGCCAATGAGGAACCAGGGGAGGAAGAGAAAAGCACTGGGTAATAGGGCATAAAAGATGCAACACTGTT-----TTCTGCATGTGCTCCTGCTTGCAGGACGCCCGCTACTGCAA ....x:..xx::::..........:.x..::x........:............::.......:.---------x:..x..:x....:x.....xx.:------.....-----.x.:.::x:..:x......::.x:...:...:x.x:..... 64M9I24M6I5M5D41M 90/134 67.2% 149/94230402 0.0% 20/134 14.9% -55517315 -38713087 +3056 chr4 + 190214555 25291943 25291942 25292019 77 CAAATGGATCAGATTTGGGAAAAAT---TGGTACAGTCATTTCGTTGTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTT chr4 - 94230402 19882669 19882668 19882747 74347656 74347655 74347734 79 CAAGTGG-TCGCATCTATTAAAGATAGCTGTTAAAATCAGTTTGGTTTTTTTTTTTGTTGTTTGTTTGTTTCCTTGTTTT ...:...-..:x..:.:xx...:..---..x..x.:...x..:.x.x......x.................x:....... 7M1D17M3I52M 58/76 76.3% 79/94230402 0.0% 4/76 5.3% 5409274 NA +3178 chr4 + 190214555 25291983 25291982 25292026 44 GTTGTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTGTTTTT chr4 - 94230402 71609801 71609800 71609844 22620559 22620558 22620602 44 GCTGTTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTT .:..............x:....................x::... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -46317818 -47912584 +3183 chr4 + 190214555 25291984 25291983 25292044 61 TTGTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTGAGGTAGAGT chr4 - 94230402 7612775 7612774 7612835 86617568 86617567 86617628 61 TTGTTTTCCTCTGTTTTTGGTTTATTTGGTTGTTTTTGTTTTTCTTTTTTCTAATTAAAAT .......::x:....x..x....:....x..............x......:x.:x..:.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 17679209 NA +3399 chr4 + 190214555 25295556 25295555 25295634 79 GTTCAAGCCTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTGCCGAATAGCTGGGATTACAGGCACGTGCCACCAGGT chr4 - 94230402 18197131 18197130 18197207 76033196 76033195 76033272 77 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT .::...:x..:...........:.x...x..x.x........x:.:.:.......:.:....--.::.::....::x.. 62M2D15M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 7098425 NA +3011 chr4 + 190214555 25308058 25308057 25308104 47 TCCCCTTAAAACAGAACAACAACAACAAAAAAAAAAACAGTTGTGAA chr4 - 94230402 75438848 75438847 75438894 18791509 18791508 18791555 47 TCTCTTTGATACAGAACAACAACAACAACAAAAGAAACAGTAGCAAA ..:.:..:.x..................x....:.......x.::.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -50130790 -44099612 +7290 chr4 + 190214555 25314034 25314033 25314167 134 TTCTGGAACTAGGACCCACTCTTCTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAACTCGGAGGTTTTATGCCTGTTCAGCCTGTAGAGATAGAAAAGACTGTAATTTTTTTCAGTGGGAAGATGAAAAGGTA chr4 - 94230402 18244455 18244454 18244588 75985815 75985814 75985948 134 TCCTGTCGTTAGGTCCTGCTCTCCTGTTCGTGAAGACCAGCCAAGGAAAAGACGAAGGGAGAAGATTCTATGCTTGTTCGGCTTGTAGGGACAGAAAGGATTGTAAATTCTTCCAGTGGGAGGATGAGAAGGTA .:...xx::....x..::....:.....:..:...::x.x......:.....x...:xxx.:..:..:.....:.....:..:.....:..:.....:..:.....x..:..:........:.....:...... 134M 98/134 73.1% 134/94230402 0.0% 0/134 0.0% 7069579 NA +3131 chr4 + 190214555 25318286 25318285 25318387 102 TATGCATAGTAAAATTTTAGTTTGGAGCTAAACCACTGTTCTTTTTTTTTTTTCACTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGCTACAGTTTCA chr4 - 94230402 45399560 45399559 45399643 48830760 48830759 48830843 84 TATGCACAGTATATTCTTAGCATAATGTGGA------------------TCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTATGCAAAAATTTCA ......:....x.x.:....:x.::x.:x:.------------------.:...x.........................::..:.x.:x..x.x.:..... 31M18D53M 61/84 72.6% 84/94230402 0.0% 18/84 21.4% -20081274 -74149128 +3109 chr4 + 190214555 25321208 25321207 25321269 62 GCCGCTCTTTCTTCCTTTCCTTTTCTTTCTTTCTCTTCTTTCCTTTCTTTTCTTTCTTTTTT chr4 - 94230402 53815603 53815602 53815664 40414739 40414738 40414800 62 GCAGATTTTTCTTCCTCTCCCCTCCTTTCTTTCCCCCCCCCCTTTTTTTTTCCTTTAATTTT ..x.x.:.........:...::.:.........:.::.:::.:...:.....:..:xx.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -28494395 -65736007 +3881 chr4 + 190214555 25322572 25322571 25322666 95 TGGCATCGTGATCTTGGCTCACCATAACCTTTGCCTCCCAGGTTCAAGAGATTCTCGTGTCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTTCT---------ACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .......:..x...---------.:.:..:xx:x..:.::........x.x...x.:x.x........::.............:....x...... 14M9D72M 64/86 74.4% 86/94230402 0.0% 9/86 10.5% 7125458 NA +3775 chr4 + 190214555 25324087 25324086 25324160 74 CTGCAATCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..::.:xx.x..:.::........:.x...x.xx.x........::...........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 7126961 NA +15394 chr4 + 190214555 25333145 25333144 25333996 852 TTAAAATATATTTCTTTGTG-TTTTATTTTGTCTTGA-AGGTACTTGAAGTTTATTGAGTTGCCCTTGACTCAGAGAAAGTTTTGTCAAACATGTCAGCAGTTGTTGTTACCAGATGACTGGGGGCAACATAGTGAGCATCAGGTTCTGGGTAATGTGTCCATTACCCAGTTAAGAAGGCCCAGTCAACTCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTGTTGGAACACCAAGGTATGTCATGTGA---TTTTTTAAAGAATTATCTTCTCACCACTATTGAAAC----TGTATGAAGATTTTATTAAGTAGTTACTTACTCTGTGCAAGGTATAGCATGAAGCTTTGA-GTATTTAAAATGTAAAGCACAGTCCCTCTCTTAAGGAGTTTGCAACCTGTATTCCATTTGAGAAAAATCTTCATAGATTTCTTTCTGATGCA----TGAGAGA---AGATTCTTTCTGATTTAACTGCTAAATTGTTTATAATTTTAGACCTCTCTGTTTCAGATAAGTTCTGCTCTTAAAAAATA-------TTTGCAAAATTGAAACCTTGATTATACCTGCCAAATTCTCTTCAG-TGTTTCA-TTGAAATATCATAAA-TACCAGAAGAACATTGATGGTTTTGTTGTTTGTTTGTTTATTGTCT-ATGACATTTGTAATATCTTATTACATTTGCTTTCACTAAT--TGCTTTAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCTAACATTAAAAGCCTTTTATTGGATATTGATTTTCGGTAGGTTT chr4 - 94230402 18246090 18246089 18246901 75983502 75983501 75984313 812 TTTAAAGAGACTTCTTCAAAATTGTCTTTTGTATTTATAGATACAAGAATTTTGTTCTGTTGCCTTTATCAAAGAGGAGGTTTTGTCAGGAATGCCAGCAATTGCTATTGCCAGATGAATGGGAAAAACACTTGAGTCATCAGTTCCTGTCTGATATCTCTACTGCCCAGTTAAGAAGTCCCAGTCAACTTCTGTATCCACTAGAAAATAAAAAAACAAATGCACAGTATTTATTTGCAGACAGAAGTTGCCAGTTTCTACTGGACCTTATCATTTCACTAGGATTCACACGAGTGCTATCTGTTGGAACACCTAGGTACGTAAAATAAGAGGTTCACTATGCTTTATTTGGTTGGCAGTATCAAGGCACCTAGTGGGAATGTGGTTTTAGCT--------------CACAAGACAGA-CAAGAAGCTGCACTGTAGTTAA------------ATTCCCTCTCAC----------CCACCTATCTGGTTTTTAAATGTCATGCTAAT--ACTTCTTACCAAAGTGACATTGAGTTACTTAGCTTCTGTTTGGGTT---------TTTTTTTCTGGT----GATCCTCTAATCTCTGCTGACTTATGGTCTTTTAAGGCCATCGTATTTTTCTAACTTTAAACATTGGCCA-AATTGCTCCATTTTCTTTATCTGTTTGGTTTTAGGTTTAGTAAAGTACCAGA-------------TATTCTTGTATTGCAAGATATTTTCTGAAGATGGTGGTTATATCTTA----AATTTCTTCATCTGATTATGCTTCAGGCTTCATGAGATGATCCAGTCAAAAGCATCACAGGAAGAAGACTTCAGGGTTAGAAGCCTTCTGCTAGATATTGACTTCAGGTAGGTTT ..x...x.x.:.....::x:-..x.x......x..x.-..:...xx...x...:..xx......:..:x.xx....:.:.........::x...:.....:...:.:..:........x....::x....:xxx::x......x.:...xx.:..:.x..:.:.:.............x...........:..x........:.....:..:..:........x......:.:.....x..:x.:..:..:.....::.:x.:...:.xx.:x:.x.x..x.......x.x....:..:.x............x.....:..x.x:.:.---x..:x:x.x.xx....:.xx.::x..x...::.::.----x..:x...x:.xx.x...:x.--------------::....::.x.-..x......x::x-...x....------------.x........x:----------.x....:.x.xx:x...:.:x:xx..x:.x..--.:.....x.::.x.::----....xx.---..x....x.:..:x..---------x..x...x.::.----..:.::::x:.:..x.x.:.x..x..x....xx..:::x-------...x.x..x..x....x...:::.-.x:...:xx...:....:.x-.....x:-..x.::.x.x:....-.......-------------.x..x....x.xx:x:xx....x...-.x..::x.x..x........----.x..x...:xx..:..--.....:...:.x......x.....x...::.x.......x:x..x:.::.x.::.:x:...:.......:.::.:........:..:x......... 20M1I16M1I291M3I36M4I21M14D11M1D13M1I8M12D12M10D32M2D16M4I7M3I16M9D12M4D39M7I24M1D20M1I7M1I15M1I7M13D26M1I20M4D16M2I97M 512/782 65.5% 812/94230402 0.0% 100/782 12.8% 7087055 NA +4448 chr4 + 190214555 25336840 25336839 25336936 97 CCTCACATTAGCCCTGTAAGATAGATG-CTATCATCATCCTCATTTTTCCAGATGAGAAAACTGAGGCATAAAGAGGTTAAATAGCTTGATCAAAATC chr4 - 94230402 10729166 10729165 10729262 83501141 83501140 83501237 97 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTT-ACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .......x..x......:..:...:.:-:..::....x.::......-x...:..:.............:.x.x.......:..::...x:..:.:.. 27M1I19M1D50M 71/96 74.0% 97/94230402 0.0% 2/96 2.1% 14607674 NA +3693 chr4 + 190214555 25343566 25343565 25343648 83 CCTATGTGGTAGA-AATTATTACTTTTACCATTTTACGGATGAAGAAACTGAGGCTCAGAAAGGTTAAGTAACTTACTAAGGAT chr4 - 94230402 10729178 10729177 10729261 83501142 83501141 83501225 84 CCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ...:..x.....:-.....:..::xx:x.........:.:..:::..........x..x.x...........:..:.:x..::. 13M1I70M 59/83 71.1% 84/94230402 0.0% 1/83 1.2% 14614388 NA +6142 chr4 + 190214555 25345537 25345536 25345628 92 TTATTTTACAGGTATTCACAGTTTTATATGGAAGATAGCTTTTGCCATTATAATATGTTTAACCATCATTTCTTTGATGGAAAGGTAAGAGC chr4 - 94230402 18247192 18247191 18247283 75983120 75983119 75983211 92 TTATTTTACAGGTATTCACAATTTTACACAGAGGATGAATTCTGCCACTACAACATGTTTAATCATTATTTTTTTGGTGGAGAGGTAAGGAC ....................:.....:.::..:...::x..:.....:..:..:........:...:....:....:....:.......::. 92M 73/92 79.3% 92/94230402 0.0% 0/92 0.0% 7098345 NA +5821 chr4 + 190214555 25351543 25351542 25351692 150 TTTTTCTTTAATTTACTATTATTTTTTCCTTTTTGTGATCCATTAGATGACAGTCACAAAGAACTACCCATTTTCTGGATTTTCCCCTATTTTTTTGAATCCCGAATTTGTCAGTTTTTTCCAAGCTTCCAGATGCTGGATTACCAGGTA chr4 - 94230402 18249284 18249283 18249425 75980978 75980977 75981119 142 TTTTTCTTTAATGTAC----ATCCAAGCCTTTTTAT----CACTAGGCAATAAGGACCGAGAGATGCCCACGTTCTGGGTATTTCCATACTTCTTTGAGTCCCGTATTCTTGAATTTTTCCCAAGCTTCAGTATGATGGATTATCAGGTA ............x...----..::xxx.......:.----..:...:::.:.:xx..x:...:x.:....:x......:.x..:..x..:..:.....:.....x...:x.x.:.....:.........x:x...x.......:...... 16M4D16M4D110M 102/142 71.8% 142/94230402 0.0% 8/142 5.6% 7102259 NA +7053 chr4 + 190214555 25361852 25361851 25361985 134 TTTCTAGGTAGATTATGATAATCATGCACTTTATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAAAATAATCCTTCCTACTGAAGAAGGGTACAGGTAAG chr4 - 94230402 18250573 18250572 18250706 75979697 75979696 75979830 134 TTCCCAGGTAGACTATGATAATCACGCACTATATAAACATGGTAAAACAGGTCGCAGACAGTCCCCTGTCCGTATCTTCACAAATCTGTCCCCAAGTGTGATTGTACTTCCTGCAGAGGAGGGCTATAGGTAAG ..:.:.......:...........:.....x........:..x..:........x.:......:..:..x.....:.....x..:x.x:.x..x.:::x:..x:.x......:.x..:..:..x..:....... 134M 99/134 73.9% 134/94230402 0.0% 0/134 0.0% 7111279 NA +6803 chr4 + 190214555 25377456 25377455 25377592 137 CCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACACAGCTGGCGAGGTGAGTGAGCC-------GGCGGG-AGCCCG-----CCTGTGCTGGGTC chr4 - 94230402 18254934 18254933 18255083 75975320 75975319 75975469 150 CCTTCCGGCAGGTCGGGGAGAAGCAGCTGCCGCAGGAGGTCGTCGTCATGGCGTGGTCCCCCAAGAGGGACCTCATCGCTCTGGCCAACAGGGCGGGAGAGGTGAGCGCGGCGCGGGAAGGCGGGCAGCCCGCCGCCCCTGCCCTGGGCC ........xx...x..:...........x.........:.::.:x..x...:x.....x......x....:.....:...:.........x:..x..x........:.x.x.-------......-......-----....:x.....:. 112M7I6M1I6M5I13M 109/137 79.6% 150/94230402 0.0% 13/137 9.5% 7122522 NA +8550 chr4 + 190214555 25380306 25380305 25380489 184 GATCTAGGTTTATTTTA-----TTTTTGGAAAT--GAATTTTTAATTTCCTGCCAT---TATATCTGCTTTGTCTTAGGTTTTACTTCATCGACTGGCAAGTTTTCATCGAGTTTGGAGTTTTCCACCAAATGAAAATACAGGAAAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACGTAATGATAA chr4 - 94230402 18256278 18256277 18256468 75973935 75973934 75974125 191 GATTTACAATGATTTTAATGGTTTTCTGTAAAACAGTGTTTGTATTTTTCCATCTTAAATGTGTCTGCTTTGT---AGGTTTTACTTCATCGGCTTGCAAACTTTCAACGAGTCTGGAGTTTGCCTCCAAATGAAAATACAGGAAAAGAAGTGACTGCTCTTGCTTGGAGGCCAGATGGCAAAAGTAATGCCAA ...:..x:x.x......-----...:..x...x--.x:...x..x...:.:::.x.---.:.:..........---................:..x....::.....x.....:........x..x....................:..:.....xxx...x..x.....:............x......x:.. 17M5I11M2I21M3I14M3D118M 143/181 79.0% 191/94230402 0.0% 13/181 7.2% 7124028 NA +9317 chr4 + 190214555 25383250 25383249 25383407 158 TCTTGTTTTAGTTTTGGCCTTTGCTCTTGCTGATACCAAGAAAATTGTTTTGTGTGATGTAGAAAAACCTGAGAGCTTACACTCTTTTTCTGTGGAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGGT-AATTAGAAAAAC chr4 - 94230402 18257041 18257040 18257199 75973204 75973203 75973362 159 TCTTTTTCTAGTTTTGGCTTTTGGCCTTACTGATACCAAGCGGATTATTCTGTGTGATGTAGAAAAACCTGAAAGCTTGCACTCCTTCTCTGTGAACTTATCTATTACTTATATGCATTGGATGGAAGTAACTGCAGAGAGCAGGTGGGTCTGAAAAAC ....x..:..........:....x:...:...........x::...:..:......................:.....:.....:..:......:.xx:x:.x:..x.:.:..................:..x.:...:.......-::.:x....... 146M1I12M 124/158 78.5% 159/94230402 0.0% 1/158 0.6% 7126209 NA +7153 chr4 + 190214555 25388488 25388487 25388816 329 TTTCCTTTTTAGTGTTCTCACATCATTTTATAATGCTGAGGATGAATCAAATCTTCTCTTACCTAAACTACCTACACTGCCAAAAAAGTATGTATC--ACTGGTTTCTTTG---------AAATTAATCTTGCAGATTTCTCTTTCTTCTGCTTTTAACACTGTGACAATTTTCTCATGCGTTTTAAAATA-------------TGTATTTTTACTAAG--AGTATTTTTTACCTTAATCTCTGTTTCCTTCTAGCTATAGCAACACCTCAAAAATATTTAGGTAAGATAC--------------GCCTTTTCTTGTTTTCAAG---TAAGATAATCTGCTATTATTTGGAAG----ACAGAATTGAAAGATGACC chr4 - 94230402 18258308 18258307 18258669 75971734 75971733 75972095 362 TTTCTTTTTCAGCATTCTCACTTCCTTTTACAATGCTGAGGATGAGGCAAATCTCGTTTTGCCTAAATTACCAGCACTACCAAAAAAGTAAGCATTGAACTAGAAAGCCTGGGAAGACCTAAGTTGCGCTTGTTGTTGTGTTGGTTATTTGTCTTCACTACTCTA----------CTGGTGTTTTGAATTAGATGCCTGCTTATTGTAATTCAACTTGGTTGTTGtttttttcttt----ttttttttttttCAGTTATAGTACCACTGCAAAAATTTTCAGGTAAGAAACTGACATCTTCGTTAGTTTTTTGGTTTTTTTAGGAGTTTGGGTATTTGGGTTTTTTTTAGGGGTTtcatagaatcatagaatggcc ....:....:..::.......x..x.....:..............:x.......:x.:..:......:....x:....:...........x.:..:--...:.xxxx::..---------..:..:xx....:x.x.x.x.:xx.:x.:..::..:.x:...x.:----------.xx.:.....:..x..-------------....x..:x...x:.--:x.:......x.:..----.:.x...::..::..:.....:.x...:x.......x..:........x..--------------.::....xx.x....:.:.---.x:.:..x.:x.x.x..x...:.::.----.:.....::x.::...:.. 96M2I13M9I45M10D16M13I15M2I15M4D51M14I19M3I26M4I19M 211/315 67.0% 362/94230402 0.0% 61/315 19.4% 7130180 NA +6416 chr4 + 190214555 25390115 25390114 25390245 131 TGTTGCATTGTTTTTAATTAGGCTTAATATTCTCGTCCTTGGAGGAAGCTCTGGATTTATTGAGCTTTATGCTTATGGAATGTTTAAAATTGCTCGAGTCACAGGGGTAAGATTTCTTTAACATTTTCTCT chr4 - 94230402 18260118 18260117 18260246 75970157 75970156 75970285 129 TGTTCTTCTGTTCTTA--CAGGCTTAATGCTCTTGTCCTTGGTGGCAGCTCAGGGTTTATTGAAATTTATGCTTATGGAATGTTCAAGATTGCTACAGTAACTGAGGTATGTTTGTTTCTGTATTTTTTTT ....x:x:....:...--:.........::...:........x..x.....x..:........:x...................:..:......xx...x..x.:....x.x..x:..:x::.....:.:. 16M2D113M 97/129 75.2% 129/94230402 0.0% 2/129 1.6% 7129997 NA +4997 chr4 + 190214555 25390908 25390907 25391038 131 CAGATTGCTGGTACTTGTCTTGCATTATGTTTATCAAGTGATTTGAAATCATTATCAGTGGTCACAGAAGT------CTCTACCAATGGTGCTTCAGAAGTTTCATACTTTCAGGTGAGTATTGGAACTTGATAACG chr4 - 94230402 18260606 18260605 18260742 75969661 75969660 75969797 137 CAGGTGGCAGGTTCTTGTCGTGGACTCTGTTTATCTAGTGATCTGAAATCACTATCGGTTATTACAGAAATACAAGATTCTCCTGACAGTGAAGCAGAGATAACTTATTTTCAGGCAAGTAAAGTAATTTTAAAATG ...:.x..x...x......x..x.:.x........x......:........:....:..x:.:......:.------:...x.::.::...xxx....::.xx.x..:.......::....xx.x..:..x.x..:. 71M6I60M 91/131 69.5% 137/94230402 0.0% 6/131 4.6% 7130302 NA +6170 chr4 + 190214555 25392317 25392316 25392539 223 TTTACTCTTTTGATT-TTACAGCTTGAAACTAATCTGTTGTACTCTTTCTTACCTGAAGTAACTCGGATGGCCAGAAAGTTTACTCATATTTCAGCTCTGTTACAGGTATTTATTTAGAGCTTGTTTTATGTGAATATT-----TATTATCGGCTTCTAAAGTTCTGT---AAATAAAAAGCTTC-------AAAATTTTGTTTTGTAAAGCTTTCTGAAGTAGAGGTA----TCTAGTCTGA chr4 - 94230402 18261239 18261238 18261468 75968935 75968934 75969164 230 TTAACTATTCTATTTGTTATAGCTGGACACCAGTCTATTATCAAGTTATTTACCTGAGGTAACTCGAATGGCCCGGAAGTTTACTCACATTTCAACTCTGTTACAGGTATGGTTTTG----TTGTGACATCTTAATATCTCAAGTCTTAGAGGCTTCAATATTCCTACACGAAGTAAAATTTTTCTAGTGGGAAACTTCTGTT------GGCTTT---AAGTAAATGTGGAGCTCTAGCTTGA ..x...x..:.:x..-...:....x..x..:.:...:..:.xxxx..x:........:........:......x.:...........:......:...............xxx...:----....xx:..x.x.....:-----.x...xx......x.x.x.:..::---..:.....xx:...-------...x..:....------:.....---.....:.x..:----.....::... 15M1I101M4D18M5I24M3I14M7I11M6D6M3D11M4I10M 155/210 73.8% 230/94230402 0.0% 33/210 15.7% 7131078 NA +6772 chr4 + 190214555 25393783 25393782 25394933 1151 AATTTTTCTTTTTTGCTAATAGTATATAAATTTGTCACTAACATGTATGTGTGAAGCATGGGAAGAAATACTAATGCAGATGGATTCTCGTCTCACCAAGTTTGTGCAGGTAAAGCAGCTGAAGTTTCCCATGGAGAGAG------TTAAAGAATGCATGATGTATGTCTTTACCTTGAGGTACATGAGAAAAATCAGTTTGATTCATAAAAGGC--TAAGATCATAATTTCT---TTCAAATG---GCTTC---------------GTCTGA--------------------------------CTTCAAACTGCTTCCTC-AGATTTGCCAAAAGGGCTCTTTTCCCATTGATACAACTTAAGTGGGGACAGGATTG---------TGAAGTGGAGCTGGTGGGGCTTTGGCAATAAGGGCAGGTGTTAGAACAGCTGATTGGCTATCTTCTAGTCACTGATGTTCAG------ATGATCACTTTATGGATTTGATGGAAGTCTAAGGCAAGGAAAGGGAGTCATGCTCCTATAATTTTGAATAAATATGCTTATAATTTAAGAAATACATATATCACAATTTTTTT------------------TTCACTTTTTTCCAGGAAAAGAACACAACCACATCAGTGCAAGATGAGTTCA-----TGCACTTGCTATTATGGGGGAAAGC-----AAGGTAATAAACTCAGATTA---------------------------GGTGCTCCTGTTTTTGCTTC----------------TTTTTTAACAGTAATTATT-----TATTTGAAAAGTAGTTT-ATAGTCATAGTATGTGATTTTTTT---AATTGATACATAATATTTTAATTGATACATAATGTGT-TACATACTTACGGGGTATATGTGATGTTACATGCGTAGAATTTTTTGTGGGG----------------CTATTTCTTTATTTTGTTTCTTGTTTGTGCTT-----CGAAATTTAAAAGTTGTAAGTGATGCATTCAGATTTCCAATAGAGAAGTGACTAAAAATACTTTGTTTTTCATTGTAGTGCTGAACTTCAGACTCTCTTGATGAATCAGTTAACAGTAAAGGTGCAGTTAATGTATCTATGTATTCAAATGGCTATGAACACATTCTTAATTTTTTTTT--------TCGAGTGGCA-TATAATATCCTGATTGTATGCTAAATATATTTTCCTTTTTTAATTAGGGCTTGAAAAAGCTTGGCCAGTCTATAGAGTCATCATACTCCAGTATACAAAAATTGGTCATAAGTCATTTACAGAGGTATG----AAGGTGACGTAGAATTTTTTGGT chr4 - 94230402 18261576 18261575 18262803 75967600 75967599 75968827 1228 AATTTTACTGTCTGTATTGCAGTATATAAAGTTGTCATTGACGTGCATGTGTGAAGCGTGGGAAGAAATATTGATGCAGATGGACTCACGGCTAACAAAATTTGTACAGGTATTGTAGTATTAACTGCTCTTCTGGAAAACTGTTTCTGTAGTAGGTCTGCTGTTCATCTTAACTACATAGTGTATTAT----CTTAATGCTGTTTATTTAAGGCCTCCAGATAACAGTCTCTAAGTCCAGAGGCAAGCTGCTGTGATGTTGCAGATATCTGAGTACAGTCAAGTGTGATTGCATTGTGATACTCCTTTATTTTGTTTATTCTAAGTTATTTAAAAATGATATTTTTCAGCCTGCACAGCT----ATGGAACAG--TTGCTTTCTGTTTAAGGTTGTGTTCTTTGTACTTCAGTCTTAA------------------TTCATAAATTGTCTACT-GTAAATGTTGAGCAGCAGCCCATCACCATTT-------------GCAGCCTGACTCAATGGA----------GCATATATATCAGATAATATATTTGCATATATTTTGTG---TGCATGGCTGGCAATTAATTTAATCAAGTAATTAATGTGTTTATTTTT------------AACATAGATTCTTGATTATGGAAACTGCTTAGAATTTTTACTGAGTATTACAGCTGAAAATAACTGAAAACACTGAACTTGAATCATTGAATTGAATTGAATTTCCAAAGATCAGTAGTCTGATTTCAGCATTCAAGAGTAAGGGTGGGTTTTATAATGCACTTTATTTGAGGTATCTGTGATGTTATTTGGTAGGC--TGAATGTAATCTCTTTACCAATCTATTTCAATCATTTTGGCTGACAGGAAAAGAATACAACCACTTCTGTTCAGGATGAGTT------TATGCAGCTGTTGTTATGGGGCAAAGCAAGGTAGTTACTGTTGTTTTATCTGAATATGCGTTTGTGTTTGATACTAAAATACAAAA--TGAAAG---CATATTTGGTTTTC---------------------TCTTCCCTGTCCCTTTTTAGTCTGGAACTGCAGGCATTGTTAATGAACCAACTGACAGTAAAGGTAT-GTTAATAT-------TATTTAACATCTTAGAACTATCTGTTTCAGTATCTTTTAATCACTGTTCATTAACATTAAGAGAACATTATTATATGTT-----TATATTTCTTTTTTAA-CAGGGTTTAAAAAAGCTCGGTCAGTCCATAGAGTCCTCCTATTCCAGTATACAAAAATTGGTTATAAGTCATTTGCAGAGGTAAGTCACAAGATGTCCAATAAATTTTAGGT ......x..x.:.xxx.x::..........x......:.:..:..:...........:............:.:...........:..x..x..x..x..:.....:......xx.:..:xxx.::.x.:.x.xx:..:.:------:.:x..x.x.:x..x...x::....x..:x::x:..::..x.x----x.:.:.x:x:..:..xx.....--:x....x.:.:.:...---.:..:.x.---...x.---------------:.....--------------------------------...:.xx:..:..x:..-.::..xx::....:x.x.x....:.x:::x::...:..----xx..:....--...---------.:.:..x.x.:.xx.x.x:...::.:xx...------------------:.x..x:::.:...x..-..x.x..x..xx...------..x.:..:..-------------.x..:..:.xx...x.:.----------..x:x....x:xxxx....x..x...x....x...:x.---.:...:xx.x:.....xx...------------------..:.:....------------....:.:x:x.x.x.x.:::::.xxx.:.:.-----.x:...x:x.....::.xx....::-----..:::.x.:....:::..:.---------------------------:..:x..:x:...:x..x.:----------------....x...::xxxx.....-----...:..x:.x..x:...-:...x.--x.x....:..:.:...---...:x..x:xx.x:.....:::...:.x:x..x.x:.-:.xx:....x:.xxxx:x...x.x.------.::.:..xxx..x..:.....----------------..:..x:.....:.x:x.x:x:.......:..-----::....x:....--..x...---:::...::.x....---------------------.x:.::x.x.::.x..x....x:x.....x...:.x:.x..:.....:..::.:...........::-......:.-------....:..xxxx:..x:.x:.:x.x:..x.x.x.:....--------.:x.x.::..-..x:.x.x.x.x...:....:.-----...x..:.........-:....:..:........:..:.....:........x..x..:....................:...........:........x.----...:..x.xx.x..x....x... 140M6I43M4D22M2I16M3I8M3I5M15I6M32I17M1I38M4D9M2D3M9I31M18D17M1D15M6I10M13D18M10D38M3D21M18I9M12D31M5I25M5I20M27I20M16I19M5I17M1I6M2D16M3I37M1I25M6D21M16I32M5I12M2D6M3D14M21D67M1D8M7D38M8I10M1I22M5D16M1D85M4I23M 651/1036 62.8% 1228/94230402 0.0% 307/1036 29.6% 7132207 NA +4949 chr4 + 190214555 25394307 25394306 25394379 73 CAGGAAAAGAACACAACCACATCAGTGCAAGATGAGTTCATGCACTTGCTATTATGGGGGAAAGCAAGGTAAT chr4 - 94230402 18262378 18262377 18262450 75967953 75967952 75968025 73 CAGGAAAAGAATACAACCACTTCTGTTCAGGATGAGTTTATGCAGCTGTTGTTATGGGGCAAAGCAAGGTAGT ...........:........x..x..x..:........:.....x:..:.:........x...........:. 73M 61/73 83.6% 73/94230402 0.0% 0/73 0.0% 7131929 NA +3744 chr4 + 190214555 25395525 25395524 25395607 83 CTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGCAAACCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.:.........:.x...x.xx.x........:............:.:....x.:..--......::. 72M2D9M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 7198399 NA +10306 chr4 + 190214555 25396644 25396643 25396907 264 TTTCTGCTCTGTTTGGATAGTGGCTCGGAGTCTTTATTATACCATTTGAGTGAATTGAAAGGAATGGCTTCATGGAAGCAAAAATATGAACCTCTTGGACTAGATGCTGCAGGAATCGAAGGT--AGTGATTTAATTTCTCAGTGAAATACATTAAACACAGTTTACTTATTTGACAAATGACGTTTATTTATTTTTTCCCTT-TAGAAGCTATAACTGCTGTGGGTTCTTTTATACTCAAGGCAAATGAACTTCTTCAGTAAGTAT chr4 - 94230402 18263176 18263175 18263435 75966968 75966967 75967227 260 TCTTTGCTTTACTTTCCTAGTGGCTCAGAAGCACTGTTATACTACTTGAGTGAGTTGAAAGGAATGGCTTTATGGAAACAAAAATACGAGTCTCTGGGATTGGATGCATCTGGAATTGAAGGTGCAGTAGTGT-GTGTCCTACTTAACCACATTTATCTCACTT------TTGCAAGCATAATATCTATGGCTTGCTCTCTTCACAGAGGCTACTACTGCCGTCGGTTCTTTCATCCTGAAAGCAAATGAGCTGCTTCAGTAAGTAT .:.:....:.::..xxx.........:..:x.x:.:......:.:........:................:......:........:..::....x...:.:.....xx.x.....:......--...::.x.-:.x..::.x.x..x:.....x.x.x..x..------..xx.x:x..:.::.:...xxx..x:.::.:.:-:...:....:x.....:..x........:..x..x..:........:..x............. 123M2I8M1D30M6D33M1I63M 183/257 71.2% 260/94230402 0.0% 10/257 3.9% 7133468 NA +5647 chr4 + 190214555 25402943 25402942 25403039 97 TTCTGATTTTTTGTTTTTATCTCTTTAGAGTTATAGATAGTAGTATGAAAAACTTCAAAGCATTTTTTCGGTGGCTTTATGTGGGTAAGTTAATTGA chr4 - 94230402 18263694 18263693 18263787 75966616 75966615 75966709 94 TTGTTATTGTTTGTTTCT---TCTGCAGAGTTATTGACAGTAGTATGAAAAACTTCAAAGCATTTTTTCGATGGCTGTATGTTGGTAAGCTTGATGA ..x.x...x.......:.---...x:........x..:................................:.....x.....x......:.x:x... 18M3D76M 79/94 84.0% 94/94230402 0.0% 3/94 3.2% 7139249 NA +4842 chr4 + 190214555 25405541 25405540 25405625 85 TTAAAGATAGTTTTTTAACTTTGTATTTCCAGCAATGTTGAGAATGACAGAAGACCATGTGCTTCCCGAGCTGAATAAGGTAGTA chr4 - 94230402 18264054 18264053 18264135 75966268 75966267 75966349 82 TTAAGAATATCTTTTT---TTTTTCTCCTCAGCCATGTTGAGGATGTCAGAAGATCATGTGCTTCCAGAGCTGAACAAGGTAGTA ....::...x:.....---...x.x.:::....x........:...x.......:...........x........:......... 16M3D66M 67/82 81.7% 82/94230402 0.0% 3/82 3.7% 7141487 NA +8684 chr4 + 190214555 25406783 25406782 25407256 474 AGCTTTCTTTTATCTTG----ATTTTTCTTTTTGTTCCTTTTGTTGAT---AGATGACTCAGAAAGATATCACATTTGTTGCTGAATTTCTTACTGAACATTTCAATGAGGTAAGAAGTTGATATTTCTGTAATGCAGTTTAAAAAAAAATTACAGTAAACCTGGATAATGACAAGACATAATTAAATTTAACCCAATTTAATTGAAGTCTATAGCAATTACTTTTTTAAAACTGTTGAACTAATTATGTTTATAAACATAGTCAATAAACCAGACTTTTGTTTGTGTGTCTTATAATCTATAAAAGAAAATAATAACTGCCACTCACAGCTCTCTTGAAAAGGAAGGTTTTGGGTTTAAATTTAAGATATTTTTCTTCGTGAGTTGACTTAAGAATTAAACTATGTTTATTTTTTTCCAGGCTCCAGACCTTTATAATCGAAAAGGAAAATACTTTAACGTTGAAAGAGTTGGTCAGGTA chr4 - 94230402 18265004 18265003 18265345 75965058 75965057 75965399 342 AACTCTGTTTCACCTTGCTCCATTTTTTTTCTTTTTTTTTTTGTTTATTTTAGATGACTCAGAAAGATATCACGTTTGTTGCTGATTTTCTTACTGAACACTTCAATGAGGTA---------------TGTAGTACTGGTTTGCTGAGTACAGCAGTAGTACTTGAT------------TACTTTATTTTTGCTGCTAGTAATTGAA-----TAGGAACAATTTTACG--------TAAAATAATTCCATC------------------ACC---------TTTTTGTACCTTAC-------------------------------------TTCTTGGTCA------CTTTGGGTTTAAATTTTAG----TTTTGTTTGCA-------------------------TTATTTTTTTTCAGGCGCCAGAACTTTACAATCGCAAAGGAAAATACTTCAATGTGGAGAGGGTTGGCCAGGTA .:..:.x...:.:....----......:..:..x..::.......x..---......................:...........x..............:............---------------....:.:.x.x..x:xx:.:x.:x:.....:xx..x...------------..x..x.x...x:.:xxxxx........-----...x..:x.:...x:x--------.:..x.....x::.:------------------...---------...x...::....:-------------------------------------:.....:xx.------:...............x..----....x..:.::-------------------------..........:.....x.....x.....:.....x..............:..:..x..:..:.....:...... 17M4I27M3I62M15D39M12D28M5D16M8D15M18D3M9D14M37D10M6D19M4D11M25D74M 254/335 75.8% 342/94230402 0.0% 146/335 43.6% 7141779 NA +8002 chr4 + 190214555 25409674 25409673 25409794 121 AAATTTCTAATTCTGTATTTCTAGTACTTGAAAGATGAAGATGATGATCTTGTGTCACCCCCTAACACAGAAGGAAACCAGTGGTATGACTTTCTTCAAAATAGCAGCCACCTTAAAGGTA chr4 - 94230402 18265928 18265927 18266045 75964358 75964357 75964475 118 AAATATCTGTTTCT---TTTCTAGTACTTGAAAGATGAAGATGAAGACCTTGTATCACCACCTAATACAGAAGGAAACCAGTGGTTTCACTTTCTTAAAAATAGTACTCATCTTAAAGGTA ....x...:x....---...........................x..:.....:.....x.....:...................x.x........x.......:.x:..:.......... 14M3D104M 103/118 87.3% 118/94230402 0.0% 3/118 2.5% 7143746 NA +13915 chr4 + 190214555 25413625 25413624 25414705 1081 CTGTTTTTGTTTGAAACCAGAAAGTCCTTTGCTGTTTCCTTATTATCCTCGAAAATCATTGCATTTTGTGAAAAGGCGGATGGAGAATATTATTGATCAGTGTTTGCAAAAGCCAGCAGTAAGTTTGAAAGAAATGCAT----GTCTTTGTGTAGGAGCAATAGT--GTCTACAGTATGTGGCTCACTTATGTAAA---TGA--TCTTAATTTTTAGAATGAACTATGAAAATGTTGATAGTCAACTGTTTTTGATTAACAAAAGTAACAATTTCATATGGTTCAACCTAA-TACTCCAACTTAAGTTTCTTACACACG-------------TGTGTGTGTGTGTGTGTGTGTATAAAGATTACTGAAGGTGTTGGCATCTTGAG---TATTTTATTTGTTCCCAGAAGAAATTCATTGTAAACAGTCTTAGTTACAGAGCTGATGTGTCTCTGCTTACTACTGAAGGATGTGAATGAATGG-TTGTTATGAGACCAGAGGGAGGTGGTCTTAAACCTGCCATGTGCTTAGCACCAAGGTCCTTTTCAGCTCAGA-ATTTTCTCTTTTTCCTTACTGTTACAATTGTCATTAACGTTTCTTATGTACAAGGTTTGGTGATGTAGGCGATTTTTTTACCACATTCGAACAGTGATGGTCAGTCACTTTCTGTAGAGTATCTGTGTGCATATTAACGCTCTAATTATATTTTAAAATCTTATTTTATATAGGATGTAATTGGAAAATCGATGAATCAAGCAATCTGTATTCCATTGTATAGAGATACCAGAAGGTAATTCTGTTTACCTATTGGATGGTGTAATTCCGCAGCCAATTT----AAATTT---------TTCT---CATTTCTTTTTCCCTTTTATTTTAGTGAGGATTCTACACGTAGATTGTTCAAATTTCCTTTTCTGTAAGTATA----TATTTCTTCCCTATCTTGAGTGAACAATACAATTTTGTTTTATCCATCAATAGTTAAAAAATATTATGACAATTTTTTTTCT-------------------TAGGTGGAATAATAAAACTTCAAATCTACATTATCTTCTTTTTACTATTCTAGAAGATTCACTTTATAAAATGTGCATCTTAAGGAGACATACTGATATTTCTCAGTAAG chr4 - 94230402 18266307 18266306 18267313 75963090 75963089 75964096 1007 CTTTATCTGTTTG----CAGAAAGTCCACTTTTGTTTCCCTACAATCCTGAGAAATCACTGCATTTTGTCAAAAGGCAAATGGAAGAGGTCATTGATCAGTGTTTACAAAAGCCAGCTGTAAGTTCAATTTATATAAATTATAACTTTCTTTTAGGGGTAACAGTCAATTTAAGATAGTAGTCATGCTTA-GCAAGGCCTGAAGTTTTAATTTTT---------------ACCTTTGAGAGCCTAC-----------AGCATAGGTGGCAA---CATGCATTCCAGCTTAACCACTAC----TGAGTGTCTTAAACTCAATAGAGGATTTTTTGT-TTTGTGT-TTTCTGTGCATTCTGTTTACCTTGTGCATTGA-----TGAGAGCTATTTTAATAAT------AAATAACTTGATATACAAATTACAGATTAGATAGCTGATTAGTTGAT------------AGTACATGAGTCTATATCTTCTGAAGAAATATGAAATAGGTG--CATTAAGTGACAGTGTTTGTATTAGGGATGATTATTTCAGTATAAATATTTGTGGACTTTTCTTTCAAATACACTTAGATTTTATTCTTTTTACGTA-----TTTACTGATTTAG----TTTTCTTA---------AGAAGGGATA----------TATCATGAATAACCTGCTTTTTCTTTACTCTTTTCATTATATTT---------------GTTAGGATGTGATTGGAAAGTCAGTGCATCAAGCATTCTGTGTGTCTCTCTACAAAACTTCTCAAAGGT-ATATTTTTAACAT-----------TACTTCTGAAGCTCAGTTGTACAAAGTTATAATAGTGTTCTGTACACTTGTTCTGTTTTTCCTTTTCAGTGAAGATTCCTCACCTCAATTATTTAAGCTACCATTTCTGTAAGTATGCTGTTATTTCTTT-----------------------TTGTATGTCATTTACCTGTTCTTAAAATACAATCTAACTTTTCATTTCCTGTTTCCTCACCTAATATTACAGGTGGAATGACAAAACATCCAACCTACATTATGTTCTTTTCACTATATTAGAAAGTTCTGTTTCTAAAATACACATTTTGAGGAGACATACAGATACTTCCAGGTAAG ..x.x.:......----..........x:.x:.......:..:x.....x::......:..........x.......::.....::.x:.:..............:...........x.......::.xxx.x..:x..----:::..:x.x....:.:..:...--:.:..x::..xxx.x.x::....-.:..:---...--.:.........---------------.x:x....x..:.x..-----------.:..x.:..::...---...:::x.:..:.:...-:...x.----.:...x.....x..x.:-------------...-.x.....-.x.x....:..xxx.x....:xx:x.::...:-----....---.......x.x:.------..:x..:.::x.:..x.x.x.x:x::...x.x.......xx..:xx.------------..x.::...:.xx..:x-..x.x.x..:.:xx..::x.....--.x.x..x:x:.x:...x:x..x:.xx:.x.x::x......:x:.:.-....x:xxx:...:...x.x:x....x..:xxx..x.:x:..:...:...-----...:x....x...----....:...---------.:x..x...:----------.x:::.::.xx.:...:x.x:x:x...x:x:.:.x.........---------------xx........:........:..::..x........x.....:.x:.x:.x..:.:.:x.x.:x:.....-..x:.x..x..x.-----------..x...:.x...:x.x..----...x..---------....---..:..x..:.x:::..::x...:.....:.....:x...x.x:...:..:..::.x..x.............:----........:-----------------------..x.:.x.:..::.:.x:.xx......x.:.x.x.:..xx..:x...:..-------------------:.........:.:.....x..x..:.........x.......:.....x:.....::...xx...x......:::...:..:...........x....:...:x:..... 13M4D122M4I22M2I23M1D5M3I3M2I11M15D16M11D14M3D17M1I6M4D17M13I3M1D7M1D32M5D4M3I12M6D47M12D17M1I24M2D46M1I50M5D13M4D8M9D10M10D44M15D69M1D13M11D18M4I6M9I4M3I73M4I9M23D50M19I110M 616/938 65.7% 1007/94230402 0.0% 212/938 22.6% 7147318 NA +8898 chr4 + 190214555 25416411 25416410 25416600 190 TATTTTAATTC---TAGCATCTACAGTTGTTTAGATGCACAGTTTTATGATGATGAAACTGTAACAGTAGTTCTTAAAGACACTGTAGGACGTGAAGGAAGAGATAGACTCTTGGTCCAGCTGCCTTTGTCTTTAGTATATAACAGTGAAGATTCTGCAGAATATCAGTTCACTGGGACTTATTCTACAAGGT chr4 - 94230402 18269472 18269471 18269661 75960742 75960741 75960931 190 TGTTTTATTTCCTATAGGTGCTACAGTTGTTTAGATGCACATTTTTATGATGATGAAACTGTAACTGTAGTTCTGAAGGAGAGTGTGGAACAAGAGGGGAAGGAGAGAATCTTGGCCCAGCTGCCTTTATCTTCAGTATACACAGATGAGGATC---AAGAAGTGGAGTTTATCTGGGATTCTACTAAAAGGT .:.....x...---...xxx.....................x.......................x........x..:..x.x...:.:..:x..:..:.::..x...x......:............:....:......:.xx::...:...:---x....xxxx....:.::x..:x..x.x...x..... 11M3I140M3D36M 142/187 75.9% 190/94230402 0.0% 6/187 3.2% 7146939 NA +8197 chr4 + 190214555 25417605 25417604 25418246 642 TCCCTCTTTAGGCTAGATGAACAGTGTAGTGCTATTCCCACCCGTACCATGCATTTTGAGAAGCACTGGAGATTACTGGAAAGTATGAAAGCACAGTATGTTGCTGGGAATGGTTTTCGAAAAGTGTCCTGTGTGGTAAGTGTTTAGAGATCGTTCAGCAACT------------------AAGAAA-----TTACAAGAAGTAACGTTGCTTCTTTGGAACCTTCATCAAATACATGATATATAAGGTCCTTTTGTGCAAATATT---TTTACTGTGATTTATAGCTTGTATTGA---TTATGATCATGTGGT--------GGCCTTAGCTATTTAGTT-CTTGTTCTGATAAAGCTTACTAAGTAGTTAATAATAATACTAGATTT------TAATCT-CACGAAATTGCCACTGTTGTTA----TGTGGAGATCTTTTTATACAAAATGAAGGCTGAATTTATTGATTTTGTTGTAAATTGATGGGAATATAACTTTCCTATAAAACCATTCTTTGATTCAGACTTCTGATTTCTAATTCTTTATATATGATAAGCCATTAATTTAAAAATGCTTTTATGGCCTTTTCTTTTTTAGTTAAGCTCAAATCTTCGTCATGTGAGAGTATTTGAAATGGACATAGATGATGAATGGGAGCTCGATGAGTCTTCAGATGAAGAGGAGGAGGC chr4 - 94230402 18270141 18270140 18270767 75959636 75959635 75960262 627 TCTTCTTGCAGGTTGGATGAGCAAAGGGATGAGATAGCAACACGTACTGTCTTCTTGGACAATCAGTGGAGAGTGCTGGAGAATATGAAAGCTCAGTATGTTGCTGTAAATGGTATTAGAAAAGTTTCCTGTGTGGTAAG----TACATATCTGTGAACAAGCCTGGGGGGAGGGCAGGGGAGGAAAATGTTCTATAGCTAGAGAGAATGATAGTCTGTAAACCTCATAAAGTTAAC-AGAAACAAAATTCTTGGTTATCATCATTTCATTTCTTGCAAATTAATTATTCTCTCAGAATCTATTATCAGTTTGTCAGAATACAGTCATACCTGTCTCATTACACAACCTGGAAAAATTTTAATAGCAATTAATAGATATACTTGCTTTACTTTACAGTCTGCAGAGCAATAAAACAGTTGCTAATTTCCTTGGTACCTTCATTTCGAAGATAAAGGCAGATTTCAGAGCTATTG------------GGCAATA---------CATAAA-------TTGGTATCTGTGTTCT--TTTTTAATTACTTATTAATCAAGACTTCTTAATGT-----------------------TTTCATAGCTAAGTTCAAATCTCCGTCATGTGAGAGTGTTTGAGATGGATGTAGAGGATGATGGAGAAGTTGAAGA------AGAGGAGGAGGAAGAGAC ..::::.x:...:.:.....:..:x.x::..xx..xx.x..x.....::.x:x:..x..x..x..x......x.:.....:.:.........x.............x:......x..x.......x..............----..x.x...xx.x.:...x:------------------.:....-----:..:.:xx..x:.x:x..x.xx.:..x..x.:....x..:.xx.:-.x.x.:..::.:...xxx.::x.x:...---...x:..::.x...xxxx..x.x.:::---:...x....xx.x..--------:.:.x..x..:.:.x:..-.x::x:...:x...::..xxxx..:.:......:xx.....x.x...------:.:...-..x::x.x.:xx..x....:..----:x.x.:x.:...:x.x.xx..:..:.....x..x..:.xx.x.x...------------..x....---------:.....-------..x.xx..x.xx....--...:.....x:....xx..x.x:.x::x.....x.-----------------------...:x...:....:........:..............:.....:.....::....x.....xx.:..:x.:..x..------...x..:.....:...:. 140M4D19M18I6M5I45M1D28M3I27M3I15M8I18M1I47M6I6M1I22M4I47M12D7M9D6M7D16M2D35M23D76M6D18M 372/578 64.4% 627/94230402 0.0% 113/578 19.6% 7147464 NA +3002 chr4 + 190214555 25436781 25436780 25436839 59 CCAAAAAAAAAAACAAATAAACCCATAAAACAAAACAAACAAACAAGCAAAAACCCAGT chr4 - 94230402 70538967 70538966 70539025 23691378 23691377 23691436 59 CCAGAAAAACAAACAAACGACCCCCCCCAAGAAAACAAAAAAACAAACAAAAAAACAGT ...:.....x.......::.x...x:xx..x........x......:......xx.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -45102186 -49128216 +3263 chr4 + 190214555 25437270 25437269 25437316 47 AGGACATGATTTCATTTTTTTTTTTTTTTTTTTTTTTTGAGAAGGAG chr4 - 94230402 67837409 67837408 67837455 26392948 26392947 26392994 47 AAAATGTGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG .::.::..........x.:.......................::... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -42400139 -51830263 +3199 chr4 + 190214555 25444795 25444794 25444851 57 GATTTTTTTTTTTTTTTTTAGTTTAAATTAAGATGCTTTTCTATCTTTCCCACCTAT chr4 - 94230402 34045833 34045832 34045889 60184514 60184513 60184570 57 GATTTTTTTTTTTTTTTCTAAACTAGCTTAACGTACCTTTTTGCCTTTCCCCCCTAT .................:..:x:..:x....x:.:.:...:.::.......x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -8601038 -85629364 +3945 chr4 + 190214555 25451840 25451839 25451953 114 AAAGAAAGAGAAAAAAGGAAGAGAAGAAAGAGAAAAAAAGAACAAAGGAAGGAAGAAAGAGAGAGAGAAAGAGAAAGAAGGGAATAAAGGAAGAAAGGAGGACAGAAGAAGAGA chr4 - 94230402 45355412 45355411 45355519 48874884 48874883 48874991 108 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGA------GAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGA .::........x.x..:x.xx......x.:......x....------........x..x...x.:.......x..:x.:.:..xx.......:.x.::::xx..x..:...... 41M6D67M 76/108 70.4% 108/94230402 0.0% 6/108 5.6% -19903572 -74326830 +3475 chr4 + 190214555 25451858 25451857 25451955 98 AAGAGAAGAAAGAGAAAAAAAGAACAAAGGAAGGAAGAAAGAGAGAGAGAAAGAG-AAAGAAGGGAATAAAGGAAGAAAGGAGGACAGAAGAAGAGAAA chr4 - 94230402 17708401 17708400 17708499 76521904 76521903 76522002 99 AAGCAGAGAGAGTGATAAGCAGAACAAAGGCAGGAAGAGAGAGACCAAGAACAAGTAAGGTAAGAAGGGGAGAAAGAAAGGACAACCCAGCATGGGAAA ...x::...:..x..x..:x..........x.......:.....xx:....x:..-..:.x.:.:.:x::..:.........x:..xx.:x.x.:.... 55M1I43M 66/98 67.3% 99/94230402 0.0% 1/98 1.0% 7743457 NA +3326 chr4 + 190214555 25452663 25452662 25452728 66 TATTACTATTCCCATTTAACAGATGAGGAAACTGAGGCATAAAGAGGTTAGGAGATGTCCTTAAAA chr4 - 94230402 83892767 83892766 83892832 10337571 10337570 10337636 66 TATTACTGCTTCTAGTTCATGCATGAATAAACTGAAGCATAATGAGGTTATGAAATGTACTTGAGA .......::.:.:.x..x.::x....:x.......:......x.......x..:....x...:.:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -58440104 -35790298 +3008 chr4 + 190214555 25457819 25457818 25457860 42 TTTTGTCTTTTTTTTTGTTGTTGTTTGTTTGTTTTTTGTATT chr4 - 94230402 14581394 14581393 14581435 79648968 79648967 79649009 42 TTCAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTT ..:x..:......x.........................x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 10876425 NA +3299 chr4 + 190214555 25467009 25467008 25467071 63 AGACCCTGTCTCAAAACAAACAAACAAACAACAACAACAAAAAAAAACACAAAGAAACCCAAG chr4 - 94230402 13051442 13051441 13051504 81178899 81178898 81178961 63 AAACTATATCCTTAAAAAAACAAACAAACAACAACAACAACAAAAAACAACGCAAAACCTGAG .:..:x.:..::x...x.......................x........xx:x:.....::.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 12415567 NA +3125 chr4 + 190214555 25467022 25467021 25467065 44 AAACAAACAAACAAACAACAACAACAAAAAAAAACACAAAGAAA chr4 - 94230402 72680394 72680393 72680437 21549966 21549965 21550009 44 AAAAAAACAAACAAACAACAACAACAAAAAACAATAACAAGAAA ...x...........................x..:.xx...... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -47213372 -47017030 +3122 chr4 + 190214555 25475220 25475219 25475293 74 TTGCACTCCAGCCTGGGCAACAAGAGCAAAACTGCATCTCAAAAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAA chr4 - 94230402 67219245 67219244 67219318 27011085 27011084 27011158 74 TTTCCTTTCAGGCTGTGCAAGTGAAACAACACAGAATATCATTAAAAGAGAAGAAAAAAAGAAAAAGAAGAAAA ..x.x:.:...x...x....xx::.:...x..x.x..x...xx....:.:......:........::....... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -41744025 -52486377 +3814 chr4 + 190214555 25478063 25478062 25478143 81 CAAGACACTGTCTCAAAAAA------AAAAAAAAGAATATATATTTACATTTGATTGTGTATGTGTATACACACACACACACACACA chr4 - 94230402 59708305 59708304 59708391 34522012 34522011 34522098 87 CAGGACTCTGTTTAAAAAAACAACATAAAACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ..:...x....:.x......------....x...:x.:..x...x.....:x:...x.x.:...:....:.....:........... 20M6I61M 62/81 76.5% 87/94230402 0.0% 6/81 7.4% -34230242 -60000160 +3313 chr4 + 190214555 25478092 25478091 25478199 108 AATATATATTTACATTTGATTGTGTATGTGTATACACACACACACACACACACACACACGCAAACAAATGGAAAAAC---ATTCCATGCTTATGGATAGG--AAGAATCAATA chr4 - 94230402 8395807 8395806 8395913 85834490 85834489 85834596 107 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA------CAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTATTAATA ..:..:.........x..xx..:x..::.xx...................x...------....::...::....x.---.:.x...x..x::::...:.--.:.x..:.... 54M6D17M3I20M2I11M 73/102 71.6% 107/94230402 0.0% 11/102 10.8% 17082285 NA +3066 chr4 + 190214555 25478094 25478093 25478178 85 TATATATTTACATTTGATTGTGTATGTGTATACACACACACACACACACACACACACGCAAACAAATGGAAAAACATTCCATGCT chr4 - 94230402 8395799 8395798 8395883 85834520 85834519 85834604 85 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACT .:.::..xx....x.:x..:::.....:.::x:...:xx.:................:x.x.......:.x...x.x:...x:.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 17082295 NA +4520 chr4 + 190214555 25494824 25494823 25494949 126 TCTGGAAAAAAAAGAAAGAAAGGAAAGAAAGGAAAGAAAGGAAGAAAGGAAGAAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAAG chr4 - 94230402 30533160 30533159 30533286 63697117 63697116 63697243 127 TCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x:..x......:.......:.....::...:......:xx.x:.::...x....:xxx..-.x.....xx....x.:.::..x:.:....:.....:.:..x.xx::.:.:..:.....x.... 63M1I63M 84/126 66.7% 127/94230402 0.0% 1/126 0.8% -5038336 -89192066 +3729 chr4 + 190214555 25494854 25494853 25494967 114 GGAAAGAAAGGAAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAA------GAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAAGGGGGAGGGAGGGAGGAAG chr4 - 94230402 91538038 91538037 91538155 2692248 2692247 2692365 118 GGAGAGCAAGAAGGAAACGATGGA--GAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGG ...:..x...:.:....x..x.:.--........x.......:...------.x...x.::...x.x.........x::::.xx..xx......x..xx..x..:.:::....:....:. 24M2D20M6I68M 78/112 69.6% 118/94230402 0.0% 8/112 7.1% -66043184 -28187218 +3171 chr4 + 190214555 25494891 25494890 25494974 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAGGAAGAAAGGGGGAGGGAGGGAGGAAGGAAGAGG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:...........x.:x::xx.....:....:.:..:x:..::x:..:..:...:.:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -11363403 -82866999 +3056 chr4 + 190214555 25494963 25494962 25495026 64 GGAAGGAAGAGGGAGAGAGAGAGAGAGAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGGAAGAAG chr4 - 94230402 17078265 17078264 17078328 77152075 77152074 77152138 64 GGGGGGGAGGGGGAGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAGATGCAAAAG ..::..:..:...................xx.xxx...:.:..::..:..x..:..x.x.:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 8416698 NA +3046 chr4 + 190214555 25496925 25496924 25496993 69 GCTATTTC--CTTTTCTGTCCCTCTCTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193302 40193301 40193372 54037031 54037030 54037101 71 GTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT .:.:....--.......x..:..x......x..::..xx:::.:x....:............:.....::. 8M2I61M 50/69 72.5% 71/94230402 0.0% 2/69 2.9% -14696377 -79534025 +3716 chr4 + 190214555 25502580 25502579 25502666 87 CTCACGATAAACCC-TGAA--AGGTAACCACTGTTATTTCCATTTTACAAATGAGGAAACTGAGGCTCAGAGAGGTTAAG-AAGGTGCCCA chr4 - 94230402 10729167 10729166 10729257 83501146 83501145 83501236 91 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA .....:...xx..:-...:--......::...:.:.x:...........::..:.:..........x..x.x........-..xx...... 14M1I4M2I59M1I10M 67/87 77.0% 91/94230402 0.0% 4/87 4.6% 14773413 NA +3372 chr4 + 190214555 25503419 25503418 25503501 83 CTGCAACCTCTGCCTCCTGAGTTAAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:...:...x...:.x...x.xx.x........::::...........:....x...--......::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 7306293 NA +3011 chr4 + 190214555 25512199 25512198 25512242 44 AAAAAAAAAAAAAAAAAAATTTAGGATTTTACTCTGTAGTCTTT chr4 - 94230402 73265125 73265124 73265168 20965235 20965234 20965278 44 AAAAAAAAAAAAAAAACAATTCAAAACTTTACTCTGTAAACTTT ................x....:.::.:...........:x.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -47752926 -46477476 +3600 chr4 + 190214555 25516949 25516948 25517068 120 GTTCTTGGCACCTTTGTTAAGCACTCATTTCTTTCTTTCTTTCTCTCTTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 83960499 83960498 83960611 10269792 10269791 10269904 113 GTTATTGACAACCTT------CATTTATT-CTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTT ...x...:..x.:..------..:.:...-..:....:.:xx:x.......:...x.::...x.x........xx.:...:x..::..:x....:.::.......x:.x...:.:.x... 15M6D8M1D90M 76/113 67.3% 113/94230402 0.0% 7/113 6.2% -58443550 -35786852 +4514 chr4 + 190214555 25516955 25516954 25517126 172 GGCACCTTTGTTAAGCACTCATTTCTTTCTTTCTTTCTCTC--TTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT------TTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTT chr4 - 94230402 45185572 45185571 45185751 49044652 49044651 49044831 180 GGGATTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x.::.x..:.x.x::.......::::::...:.xx....--...::.x:...x...............:x....::x:.......::..::..xx:.::.::......:x..------....:x..x::.x......:xx:.x::...xx.:....x:::..:.:.....xx.:.... 41M2I71M6I60M 105/172 61.0% 180/94230402 0.0% 8/172 4.7% -19668617 -74561785 +3301 chr4 + 190214555 25516976 25516975 25517088 113 TTTCTTTCTTTCTTTCTCTCTTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----------CTTTCTTTCTTTCTTTC--TTTCTTTCTTTCCTT chr4 - 94230402 64977376 64977375 64977500 29252903 29252902 29253027 125 TTTTTTTTTTTCTATCACTTTTTCTTTTTAACTGAGTTCTCTTCCTTTAGTATCTTTATGTCTGCCTTTCTTGATGCACTCAGAGCATATGCTTTCATTCTTTCCTGCAGCCACTTTCTTTTCCT ...:...:.....x..x..:.........xx:.xxx....:...:...xx.x.....x.x...x:.......xx.x:x:.:----------.....x.......:.x.--::x........:.:. 81M10I17M2I15M 78/113 69.0% 125/94230402 0.0% 12/113 10.6% -39460400 -54770002 +3146 chr4 + 190214555 25516995 25516994 25517069 75 CTTTCTTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 83048899 83048898 83048973 11181430 11181429 11181504 75 CTTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATC ....x............x................::.x.x..::::x::...x..:x.x:x..::...:..:x.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% -57531904 -36698498 +3165 chr4 + 190214555 25517000 25516999 25517113 114 TTTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCT-TTCTTTCCTTTCTT chr4 - 94230402 23468159 23468158 23468273 70762130 70762129 70762244 115 TTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ......:...:..:........:xx:x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx.:::.x.:x......x:.:....x...:...:.-..x......::.:. 100M1I14M 72/114 63.2% 115/94230402 0.0% 1/114 0.9% 2048841 NA +3418 chr4 + 190214555 25517001 25517000 25517131 131 TTTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTTTTTTG chr4 - 94230402 81461666 81461665 81461795 12768608 12768607 12768737 130 TTTTTAATTCTTCCTTTTCTTTTTTTCTCCTGACTTCTCACCATGTTTCCTTCATTAAATGTCATCCATTCCACTTCTTGCTGTGCCTTCCCTCC-CCCTTCTCTTCTTGCCCCCTTCTTGTCTAGTCTTG .....xx.....:..........:..:..:.xx:....:x.:x.x....:...x..xxx.x.:x:::x:.::x:.....x..x.x.:...::...-:.:....:.:...x.:::...:..x.:.xx.:... 95M1D35M 79/130 60.8% 130/94230402 0.0% 1/130 0.8% -55944665 -38285737 +3190 chr4 + 190214555 25517004 25517003 25517121 118 TTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT---TCTTTCCTTTCTTTC-CTTCTTTCTTTCCTTTCTTTCTTTTTT chr4 - 94230402 23468147 23468146 23468268 70762135 70762134 70762256 122 TTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCT ..:..xx.x:.....:....:.....:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x.....x---...:.x.:x......-.......x...:....:x..x...::. 76M3I15M1I27M 77/118 65.3% 122/94230402 0.0% 4/118 3.4% 2048857 NA +3215 chr4 + 190214555 25517031 25517030 25517129 99 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTTTTT chr4 - 94230402 45185583 45185582 45185681 49044722 49044721 49044820 99 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x..........:.....x..::.:x::.:.:.:........xx:.:..:::...:. 99M 60/99 60.6% 99/94230402 0.0% 0/99 0.0% -19668552 -74561850 +3131 chr4 + 190214555 25517064 25517063 25517131 68 TCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCCTTCTTTCTTTCCTTTCTTTCTTTTTTTTTTTTTTTG chr4 - 94230402 35465501 35465500 35465568 58764835 58764834 58764902 68 TTTTTTTTTCCCCCTTACATTCTTTTCTTTCATGCTTGTTTGCAGTTCTTTGATTTGTTTTTTTTTTG .:...:....:::...x.x...:........x.x...x:..x.xx......xx...x........... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -9948437 -84281965 +3224 chr4 + 190214555 25521812 25521811 25521930 119 CAACTAAAAAACAAAAACAATAACAAAACAAAACAAAACAAAAACTCTTTGGGATCATTAGATTCTATTTTAACCAATCAATTT--TAAATGTAAACTCTTTCTTTTTCTTTTTTTTTTTT chr4 - 94230402 40406615 40406614 40406735 53823668 53823667 53823788 121 CATCTTAAAAACAACAACAACAACAAAAAAAAACTTAAAGAGAATGCTATGGTCTAGGTAGATACTCTTTTCATCAACAGGCTTCCTGAAAAGCTACTCATGCTGTTTTTTCCCTGTTCTT ..x..x........x.....:.......x.....xx..x:.:..:x..x...xx.x:x.....x..x....x.:...:x:::..--.:..x:xxx....x.x..x...:..:::.x..:.. 84M2I35M 77/119 64.7% 121/94230402 0.0% 2/119 1.7% -14884803 -79345599 +3044 chr4 + 190214555 25527453 25527452 25527518 66 ATTAAAAAAACAAACAAACAAACAAACAAAACTCCTATAACCTGTAAGTCCCAAGATATTTTGACT chr4 - 94230402 88451173 88451172 88451235 5779168 5779167 5779230 63 ATTAAAAAAACAAACAAACAAACAAAAAAAACCACTACAA---GCAAATACTCAGTTCTCCTGCCT ..........................x.....:x...:..---.:..:.x.:x..x.x.::..x.. 40M3D23M 49/63 77.8% 63/94230402 0.0% 3/63 4.8% -62923720 -31306682 +3304 chr4 + 190214555 25531928 25531927 25532054 127 GAAGCAGCAGAAGAAGAAGAACA--GGAAGAAAGAAAATAAGAAGAAGAAAAGGAGGAAGAAGAAAAAGGAGAAGAAGAAGAAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAG chr4 - 94230402 84397250 84397249 84397377 9833026 9833025 9833153 128 GAAACATGAGCACAATAATGACACGTGAGGAAACAAATTAGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGA-ATATGGTaaaaaaaaaaaaaaaaaaagaaaGATGGGAG ...:..xx..x.x..x..x:...--x..:....x...x..:::.:.:.x.x:...:.:...::.x......:...:........:...:.-.x:x..x::.::.::.::.::.::....:::.x:.... 23M2I65M1D38M 76/126 60.3% 128/94230402 0.0% 3/126 2.4% -58865322 -35365080 +3075 chr4 + 190214555 25531935 25531934 25532018 84 CAGAAGAAGAAGAACAGGAAGAAAGAAAATAAGAAGAAGAAAAGGAGGAAGAAGAAAAAGGAGAAGAAGAAGAAGGAAGAAGAG chr4 - 94230402 56098437 56098436 56098520 38131883 38131882 38131966 84 CGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAG .:.....:xx:.:.:xx:..x.:.:::....:::..xx:.....x........:........:...x.::..::..:.:..:.. 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% -30566502 -63663900 +3930 chr4 + 190214555 25553392 25553391 25553554 163 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTC-------TTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTT chr4 - 94230402 52035621 52035620 52035791 42194612 42194611 42194782 171 TCGTTTTTTCCCTCATATTTTCTGCCTGTTGGTAGATTTCCTTTCTGTTTTTCAGTTATTTCTTTACATTTGTCTTTCCTTTTGTTTCTTCTGTTCTTCATTCATTTGGGATTTTTTCCTAGTTGATTTCTGTGAAGCTATTATTCTTGCTCCATTTTTTTGTATTCTTCT ..x..:....::..x.x:.....x:..x.:-------..:......x.:....-x..x.......x:x.:.x......:....x........x.::...x...x..:xxxx:.:....:.xx..xx.....x.xxxx..x.:x.....x..::x...:...x.x..::.:. 30M7I16M1I117M 105/163 64.4% 171/94230402 0.0% 8/163 4.9% -26482229 -67748173 +3043 chr4 + 190214555 25553421 25553420 25553503 83 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTT----CTTTCTTTCCTTCCTTCCTCTTTCTT chr4 - 94230402 15446136 15446135 15446222 78784181 78784180 78784267 87 CTTTTGCCTCTTCTTCCCTCCAGTATTGCCTTTTTTCTTTCGTTTTGTTTTTTCTCTTTGCCTTGCTTTCCCTCAATCCCTTTTGTT ....:x::::.....:.:.:.xx.x..x.:..:........x....x...:....:.----...x......:..xx...::...x.. 57M4I26M 57/83 68.7% 87/94230402 0.0% 4/83 4.8% 10107285 NA +3837 chr4 + 190214555 25553435 25553434 25553556 122 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCT------TTCTTT---CTTTCCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:..:...:x.:....x........::x.x..------..:...---....xx:x::...x:.:......x..x:x..::xxxx.x:....:..:......x........x.....:..... 41M6I6M3I75M 83/122 68.0% 131/94230402 0.0% 9/122 7.4% -14665245 -79565157 +3710 chr4 + 190214555 25553491 25553490 25553569 79 CTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTATAATTTCT chr4 - 94230402 18988809 18988808 18988885 75241518 75241517 75241594 77 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCT--ATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCT ....x.:x.:.:..x.x.:..x......:.xx.:..--x...:..........:............x.........:.. 36M2D41M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 6564682 NA +4030 chr4 + 190214555 25554005 25554004 25554112 108 CAGGCT---GGAACACAGTTGCACGATCTCGGCTCACTGCAACCTTGGTCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGTGCC chr4 - 94230402 18197091 18197090 18197200 76033203 76033202 76033312 110 CAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ......---..x.....x:...x:.::x..:xx.:-..:..:..:x::x..:.::........:.x...x..x.x........::.............:....x...::.. 6M3I26M1D75M 74/107 69.2% 110/94230402 0.0% 4/107 3.7% 7356914 NA +3179 chr4 + 190214555 25571006 25571005 25571081 76 CTAGCTGTGAGACTTTGGGCAAGTCACTTGACCTCTCTGGGCCTTTGTTTCCTCATCTGTAAAAGGGAATAATAAT chr4 - 94230402 11947211 11947210 11947284 82283119 82283118 82283192 74 CTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG--ATTATAAT ...:.....x...:..:..:x........:.:..x:...x.:.::x......:...x.:.:...x.--..x..... 66M2D8M 53/74 71.6% 74/94230402 0.0% 2/74 2.7% 13623795 NA +3705 chr4 + 190214555 25582842 25582841 25582921 80 TTGTGATTGTCACCATTTTATTAATAGGGTCATGGAGGCTCAGAGAGATGAAGTAACTTTCCTAAGGCCACACAGCTTGT chr4 - 94230402 15193217 15193216 15193296 79037107 79037106 79037186 80 TCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGT .::.x...x..xx........xxx.:.:.xx..x..::......x.:..:..:......:.......:..:......... 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 10389625 NA +3590 chr4 + 190214555 25585643 25585642 25585721 79 CTGCAACCTCTACCTCCAGAGTTCAAGTGATTCTTGTGCCTCAGCCTGCCAAGTAGCTGGAATTACAGGCGTGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.x.:.........x...x::x.x........x:.............:....--....::.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 7388517 NA +3078 chr4 + 190214555 25587835 25587834 25587893 59 ACAGACACACACACAGAGACACACACATAGGGACACACACACAGAGACACATACACAGA chr4 - 94230402 36123572 36123571 36123630 58106773 58106772 58106831 59 ACAAACACACACACAGAGACATGCATAGAACTCTACACACAGAGGAACAAATAGACAGA ...:.................::..:.x.:xxx:.......x..::...x...x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -10535737 -83694665 +3282 chr4 + 190214555 25599349 25599348 25599421 73 CTGCAGACTCAAACTCCTGGGCTCAAGCAGTCCTCCCACTTCAGACCCCCAAGTAGCTGAAACTACAAGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:...x.:x..:..:.....:.....::x.:.x.xx:x:....x.:::..........:.......x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 7402223 NA +3595 chr4 + 190214555 25604310 25604309 25604367 58 CTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAGGTAGCTGAGATTACAAGTG chr4 - 94230402 18197139 18197138 18197196 76033207 76033206 76033264 58 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.............x...x..x.x........::..:.......::.:....x... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 7407171 NA +3350 chr4 + 190214555 25610886 25610885 25610954 69 CTCCCAGGTTCAAACAATTCTCGTGCCTCAGCCTTTCAAGTAGCTGGGATTACAGGTGGTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT-GCACCACTGTG ..:.::.......:::x...x.:x.x.....................:.:....x..-.::....::.. 57M1D11M 50/68 73.5% 68/94230402 0.0% 1/68 1.5% 7413747 NA +3043 chr4 + 190214555 25612013 25612012 25612069 57 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAGAAAAAGAAAAAAAAA chr4 - 94230402 7711349 7711348 7711405 86518998 86518997 86519054 57 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ....:x.:.....:...............:..xx....x....:.::..:::..:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 17900664 NA +3006 chr4 + 190214555 25612014 25612013 25612074 61 AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAGAAAAAGAAAAAAAAAGAAGT chr4 - 94230402 51871015 51871014 51871075 42359328 42359327 42359388 61 AAAAAAGCTGAATGAAAAAAAGAAGAAAGAAAATAACAGAGAAGAGGGAAAAGAAGGTGGT ......:xx:..x:.......:...........x..x.:....:.:.:....:..:.x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -26259001 -67971401 +3479 chr4 + 190214555 25626815 25626814 25626898 84 CTGCAACCTCCGCCTCCCGGATTCAAGCGATTGTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTCCGCCACTGCAT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:..:..:xx:x..:.:..:......:.x..xx.xx.x........:............:.:....--...x.:......::. 67M2D15M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 7429689 NA +3137 chr4 + 190214555 25640550 25640549 25640595 46 AACACGTTTCAAATGGGTGTTTTTTTGTTAGTTTTTTATTTTTTTG chr4 - 94230402 17181104 17181103 17181149 77049254 77049253 77049299 46 AACATATTTCAAGTGTGTTTTTTTCTGTTATTTTTTTATTTTTTTG ....::......:..x..x.....:.....x............... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 8459446 NA +3231 chr4 + 190214555 25644898 25644897 25644980 83 TGAAACTCTGTCTCAAAAAAAACAAAAACAAAACCAAAACCAAACAAAACAAAAAACAAAACAAAACAAAATTCCAGAGGTTT chr4 - 94230402 10808036 10808035 10808118 83422285 83422284 83422367 83 TGAGGCTATGTTTGGAGAAATGCAAACACAAATGCAAATACAAGCAATAAAAAAAAAAAAACAGAATAATTTTCTGCAGATTT ...::..x...:.x:.:...x:....x.....xx....xx...:...x.x......x......:..:..xx...::x..:... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 14836862 NA +3666 chr4 + 190214555 25660621 25660620 25660693 73 CTGCAACCTCCACCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..:.::.:........x...x.xx.x........::.:...........:....x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 7463495 NA +6141 chr4 + 190214555 25664197 25664196 25664337 141 TGCAGAGAGAGACACCAAAGGGAAGATTCTCTGTTTCTTCCAAGGGATTGGGAGATTGATTTTACTTCTCGGATTTCTCTACTTTTTCGTGTGCTCCCTGGATATTCTTAGTAGCGCCTTCCAGCTGGTTGGAGGTAAGAA chr4 - 94230402 18334794 18334793 18334934 75895469 75895468 75895609 141 TGCAGAACTGGATAGAAAAGGAAAAATCATTCGTGTACTCTATGGGATTGGAAAGTTCATTATGTTGCTTGGATTACTCTACTTGTTCGTGTGTTCTCTGGATGTACTGAGCTCTGCTTTTCAACTAGTAGGAGGTATGAA ......:xx:..:.xx.....:..:..:x.::..x.x:..:.x........:.::..x...x.::.x..:.....x........x........:..:......:.x..x..:xx:..:..:..:..:..x.......x... 141M 97/141 68.8% 141/94230402 0.0% 0/141 0.0% 7329403 NA +7373 chr4 + 190214555 25666119 25666118 25666278 160 TTTTCCCAGGAAAAATGGCAGGACAGTTCTTCAGCAACAGCTCTATTATGTCCAACCCTTTGTTGGGGCTGGTGATCGGGGTGCTGGTGACCGTCTTGGTGCAGAGCTCCAGCACCTCAACGTCCATCGTTGTCAGCATGGTGTCCTCTTCATGTGAGTC chr4 - 94230402 18335757 18335756 18335916 75894487 75894486 75894646 160 TTTTGGTAGGTAAAGCAGCAGGGGACATTTTTAAAGATGATTCAGTGCTCTCTAATCCTGTTGCGGGGCTGGTGATAGGAGTTCTGGTGACTGTGATGGTCCAGAGCTCCAGCACTTCTTCATCCATCATCGTCAGCATGGTGTCCTCTACACGTAAGTC ....xx:...x...:::.....:x.xx.:..:.:x:.::::..x:.xx.x..:..:...x.xx:............x..:..x........:..xx....x..............:..xx.:......:.:..................x..:..:.... 160M 113/160 70.6% 160/94230402 0.0% 0/160 0.0% 7330362 NA +7295 chr4 + 190214555 25667865 25667864 25668005 141 TTTTCCATCCTCTAGTGCTCACTGTTCGGGCTGCCATCCCCATTATCATGGGGGCCAACATTGGAACGTCAATCACCAACACTATTGTTGCGCTCATGCAGGTGGGAGATCGGAGTGAGTTCAGAAGGTAAGAGGCTCAAA chr4 - 94230402 18336512 18336511 18336652 75893751 75893750 75893891 141 TTTTCTACTTTCTAGTGCTGACTGTACAATCAGCTATTCCTATCATTATGGGGGCAAACATTGGCACCTCAGTTACAAACACAATTGTGGCGCTCATGCAAGCCGGGGACAGGAATGAATTTAGAAGGTATTGTACTTAAA .....:.:::.........x.....x.::x.x..:..:..:..:..:........x........x..x...:.:..x.....x.....x...........:.:x..:..:x...:...:..:........xx:x:..:... 141M 103/141 73.0% 141/94230402 0.0% 0/141 0.0% 7331353 NA +7295 chr4 + 190214555 25667865 25667864 25668005 141 TTTTCCATCCTCTAGTGCTCACTGTTCGGGCTGCCATCCCCATTATCATGGGGGCCAACATTGGAACGTCAATCACCAACACTATTGTTGCGCTCATGCAGGTGGGAGATCGGAGTGAGTTCAGAAGGTAAGAGGCTCAAA chr4 - 94230402 18332525 18332524 18332665 75897738 75897737 75897878 141 TTTTCTACTTTCTAGTGCTGACTGTACAATCAGCTATTCCTATCATTATGGGGGCAAACATTGGCACCTCAGTTACAAACACAATTGTGGCGCTCATGCAAGCCGGGGACAGGAATGAATTTAGAAGGTATTGTACTTAAA .....:.:::.........x.....x.::x.x..:..:..:..:..:........x........x..x...:.:..x.....x.....x...........:.:x..:..:x...:...:..:........xx:x:..:... 141M 103/141 73.0% 141/94230402 0.0% 0/141 0.0% 7335340 NA +8835 chr4 + 190214555 25669639 25669638 25669856 218 TCCCATAGAGCTTTTGCAGGAGCCACTGTCCATGACTTCTTCAACTGGCTGTCCGTGTTGGTGCTCTTGCCCGTGGAGGTGGCCACCCATTACCTCGAGATCATAACCCAGCTTATAGTGGAGAGCTTCCACTTCAAGAATGGAGAAGATGCCCCAGATCTTCTGAAAGTCATCACTAAGCCCTTCACAAAGCTCATTGTCCAGGTAA----CTTAGCTCCT chr4 - 94230402 18338182 18338181 18338403 75892000 75891999 75892221 222 TCTTGTAGGGCCTTTGCTGGGGCAACAATCCATGATTTCTTTAACTGGCTTGCTGTGTTTGCATTGTTGCCCATTGAAGTCATTTCTGGCTATCTTTACCATCTCACCAATGTTATAGTTGAGTCCTTTCATCTTGAAAGTGGTGAAGATGCCCCTGAGCTACTAAAAGTCATCACAGACCCTTTTACAAAGCTCATCATCGAGGTAAGCTCTTTAGCTCTT ..:::...:..:.....x..:..x..x:.......:.....:........xx.:.....x.:::.x......:.x..:..x:::x.:x::..:..:x.xxx:x.x...x.xx.......x...xx...:..::.::.:.:...x...........x..x..x..:...........x:.x..:..:...........::..x......----:.......:. 208M4I10M 149/218 68.3% 222/94230402 0.0% 4/218 1.8% 7331457 NA +7954 chr4 + 190214555 25673069 25673068 25673274 206 TTCTTTGTGGTCTTTCAGGCCAGCATATCTTTGTGAATTTCCACCTCCCGGATCTTGCTGTGGGCACCATCTTGCTCATACTCTCCCTGCTGGTCCTCTGTGGTTGCCTGATCATGATTGTCAAGATCCTGGGCTCTGTGCTCAAGGGGCAGGTCGCCACTGTCATCAAGAAGACCATCAACACTGGTAGGTACACTGCCCTCACT chr4 - 94230402 18342441 18342440 18342645 75887758 75887757 75887962 205 TCCTTTTCTTTTTTCCAGGCCGGCATCTCTTTGCAGAAACAGACCTGCCTGATCTTGCCATCGGTCTCATACTTCTGGCTTTGTCCCTGCTTGTTCTTTGCTCCTGTTTGGTGATGATCGTTAAGCTGTTAAACTCTGTGCTTAAAGGACAAGTAGCAAGTGTTATCAAGAAGACAATCAACACTGGTAATTAC-CTGCTTCCCCT .:....x:xx.:..:......:....x......:::.xx:xx....x..x........::.x..:x:...x:.x..x::x:.x........x..:..:..:xx:..::..:.x.....:..:...x.x:.:::.........:..:..:..:..x..x.x...:...........x.............:x...-....:::.x.. 194M1D11M 137/205 66.8% 205/94230402 0.0% 1/205 0.5% 7330628 NA +13234 chr4 + 190214555 25674277 25674276 25674634 358 TCTTCCTTCTGTCTTCC-AGATTTCCCCTTTCCCTTTGCATGGTTGACTGGCTACCTGGCCATCCTCGTCGGGGCAGGCATGACCTTCATCGTACAGAGCAGCTCTGTGTTCACGTCGGCCTTGACCCCCCTGATTGGTGAGTTACACCCTGGCTTCTCCCTCTGGCCACCACTGCCATTTCCTGTCATCC-CATGGGGCTGATA-TGTTTG-TGTT-TTGTGTTTCCCCCAGGAATCGGCGTGATAACCATTGAGAGGGCTTATCCACTCACGCTGGGCTCCAACATCGGCACCACCACCACCGCCATCCTGGCCGCCTTAGCCAGCCCTGGCAATGCATTGAGGAGTTCACTCCAGGTCAG chr4 - 94230402 18343973 18343972 18344326 75886077 75886076 75886430 354 TCTTCCCCCTGTTTTTCTAGATTTCCCATTTCCTTTTACTTGGCTGGCTGGATACCTGGCTATGCTTGCAGGGGCTGGCATGACTTTCGTTGTTCAAAGTAGTTCTGTCTTCACGTCTGCTATTACACCTCTTGTTGGTAAGTTGT-CAGTGTGTTATTCCTC--------ATCCCCACTTTTTATCTTCTTCATCATTCTAAAACTGCTTAATGCTATTTCTTTTCTTCTAGGCATTGGTGTTATAAGCATTGAGCGTTCTTATCCCCTCACCCTAGGAGCTAACATTGGCACAACCACAACAGCTATACTTGCAGCTTTAGCAAGCCCAGGGAGTACATTAAAATATTCATTACAGGTCAG ......::....:..:.-.........x.....:...:.x...:..:....x........:..x..:.:x.....x........:...:.:..x..:..:..:.....x........x..:x.x..x..:..x:.....:....::-.xx..xx..x.:....--------.::x...:..::.:..x..:-...x:xx..:.x.-..:..:-..:.-..x:x....::.:...x..:..:..x....x.......x.xx.......x.....x..:..xx.:.....:.....x.....x..x..:..x..x..x..:.....x.....x..x.:.:....:.::x:....:.x........ 17M1I128M1D16M8D20M1I13M1I6M1I4M1I145M 248/349 71.1% 354/94230402 0.0% 14/349 4.0% 7330304 NA +13647 chr4 + 190214555 25676110 25676109 25676554 445 ACCTGTCCAACCTCTTGTGTTGCAGATCGCCCTGTGCCACTTTTTCTTCAACATCTCCGGCATCTTGCTGTGGTACCCGATCCCGTTCACTCGCCTGCCCATCCGCATGGCCAAGGGGCTGGGCAACATCTCTGCCAAGTATCGCTGGTTCGCCGTCTTCTACCTGATCATCTTCTTCTTCCTGATCCCGCTGACGGTGTTTGGCCTCTCGCTGGCCGGCTGGCGGGTGCTGGTTGGTGTCGGGGTTCCC--GTCGTCTTCATCATCATCCTGGT-ACTGTGCCTCCGACTCCTGCAGTCTCGCTGCCCACGCGTCCTGCCGAAGAAACTCCAGAACTGGAACTTCCTGCCGCTGTGGATGCGCTCGCTGAAGCCCTGGGATGCCGT-----CGTCTCCAAGTTCACCGGCTGCTTCCAGATGCGCTGCTGCTGCTGCTGCCGCGTGTGCTGC chr4 - 94230402 18345049 18345048 18345490 75884913 75884912 75885354 442 ACTTTTCAAATGTTTTTGCTTTTAGATTGCCTTGTGCCACTTTTTCTTCAATGTCTCTGGGATTATCCTGTTTTACCCGCTGCCTTTTACCCGGCTGCCAATCCGCATGAGCAAGAGCTTGGGAAACATAACAGCCAAGTACAGATGGTTTGCTATATTTTATCTTCTCATCTGCTTCTTTCTTTTGCCTTTGTTTGTATTTGGTCTGTCACTGGCGGGCTGGCCAGTTCTTTTGGGTGTTTGCCTTCCCCTGCTGGCTCTGT--TTATTGCGGTGATTGTAATTAATA-TTATGCAGACGAGGCGGCCACATTCACTGCCTGAGAAGCTTCAAAACTGGGACTTCCTACCCATCTGGATGCACTCCCTAGAGCCCTGGGACAATATGATTATGTCTTCA-----CTCGCCTTTTGTGGGAAGCATTGCTGCGGATTCTGCAA---GTGCTGC ..:.x..x..:x.:..xxx..x:....:...:...................::....:..x..:x.x....xx......x.x..x..:..:..x.....x.........:x....:.x:....x.....xx.x........:x.x.....:..::.x..:..:..xx......x......:..xx.x..x:..x:x..:.....:..x..:.....x.......x:..x..xx.x.....:x.xx.....--.::.x..:::.--.:..:x:...-.:...:x:.xxx.-.:x.....x.xx.x:.x....::x:x.....x:....:..:..:......:.......:..xx.x.......:...x..::..........::x::.-----:....:..-----x:..x..x:.x:x:..x..::......x.x.x....x:---....... 250M2I11M2D10M1I13M1D97M5I8M5D38M3D7M 292/434 67.3% 442/94230402 0.0% 19/434 4.4% 7331061 NA +3116 chr4 + 190214555 25679098 25679097 25679156 59 ATTTGAAAAAACAAAACAAAACGAACAAAAAAAAATGTGAGGTCTCTT---CCTTCACTGAA chr4 - 94230402 65669150 65669149 65669211 28561192 28561191 28561253 62 ACTTAAAAAAACAAAACAAAACAAACAAAAAAAACCACTAGATTTCTTTACTTTTAACTGAA .:..:.................:...........x:::x..:.:....---::..x...... 48M3I11M 46/59 78.0% 62/94230402 0.0% 3/59 5.1% -39990052 -54240350 +3408 chr4 + 190214555 25683981 25683980 25684041 61 CTCCCAGGTTCCAGTGATTCTCATACCTTGGCCTCCCAAGTAGCTGGAATTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.::.....x....x...x..x:x..::....::.............:....x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 7486842 NA +3030 chr4 + 190214555 25689432 25689431 25689490 59 AAAAAAACAAAACAAAACAAAACAAAACAATAACACCTCACAATTATTCTGGTGACTCT chr4 - 94230402 66119145 66119144 66119203 28111200 28111199 28111258 59 AAAAAAACACACCAAAACAACACAAAATAACCACACTTCATAGTTTTCCTGAAGTTTCT .........x.x........x......:..:x....:...:.:..x.:...:x.x:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -40429713 -53800689 +3288 chr4 + 190214555 25700559 25700558 25700632 74 CTGCAACCTTTGCCTCCCGGGTTCAAGCAATTCTGCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:.........::x...xxxx.x........::::.........:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 7503433 NA +3064 chr4 + 190214555 25714481 25714480 25714550 70 TTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .:.....:..x.....:.x:..:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -19883232 -74347170 +3064 chr4 + 190214555 25714485 25714484 25714554 70 TTTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .:...:....x.....::x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -19883228 -74347174 +3026 chr4 + 190214555 25714510 25714509 25714579 70 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTTTCTT chr4 - 94230402 9693768 9693767 9693835 84536568 84536567 84536635 68 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCC--CTTTCCCTT .....:..:..::.:.::....:..::.:x...:..x.:...x..x...:.........--....::... 59M2D9M 48/68 70.6% 68/94230402 0.0% 2/68 2.9% 16020742 NA +3024 chr4 + 190214555 25724729 25724728 25724781 53 TCCAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAA chr4 - 94230402 44177688 44177687 44177740 50052663 50052662 50052715 53 TCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGA .......:...............:....:.:.x.....x:x...:::.:..:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -18452959 -75777443 +3055 chr4 + 190214555 25724736 25724735 25724806 71 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAATTAAAAGGAAAAAAGAAAGAAAAAG chr4 - 94230402 66946948 66946947 66947018 27283385 27283384 27283455 71 CAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTTTTGAAAGAAAAAG .....x:...x.x........:...:........:....:..x.:xxx..x....xxxxx........... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -41222212 -53008190 +3206 chr4 + 190214555 25739204 25739203 25739251 48 GTCTCAAAAAAGAAAAACAAAAACAACAACAACAAAAAAACAATGTCT chr4 - 94230402 51715191 51715190 51715238 42515165 42515164 42515212 48 GTCCTTAAAAAACAAAACAAAAACAACAACAACAAAAAAACTGTGTTT ...::x.....:x............................x:...:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -25975987 -68254415 +8125 chr4 + 190214555 25757470 25757469 25757801 332 AAAAAAAAAAATCCCTGCTTTTTTTTTTTTTAATATATTGCTTTCGCTTTTTATAAATCTTTACCTGAGACAGACTGGAAATACTGCACAGTCCAGGCGATCAATATGGATAGCAGAAAGGTTCCCAGAAAGTAGATCTGCAA-----ACATCAGAAGCACGC---ATTAGTGACTGACAAAGGGCAGGGGCCACAAG----GGTGGGGCCGGT----GGGAC-------ATGAAACCTACCAGGGCTGAGTGCAGGATAGCACCCCAGAGAAGCCGCAAGTGCAGGTAAAGCCAGGCCAAGGAGCAGGGGCTGAAGGACTCCTCGTTACTGTGGCTCCAGCACCTGCAGACAAA chr4 - 94230402 18368140 18368139 18368484 75861919 75861918 75862263 345 AAACAAAAAGATCACTCCTATTATTTATTCAGTTTTATTA----------TGACAAATACTTACCAGATAGAGTCTGAAAATAGTGCACTGCAAATGCAACCAGAATTGATAGAAGAAAGGTTCCCATGAAATATATCTGTGACAGGAAGGTTAAAAATATGTTAGATCAGTGCAAAGCCAAGATAGTGCTCCAAATGAACTGGTGGTTCCAGTTCCTGGTACCAAACAAACAATACATACCAAAGTAGACTGTAAAATATTGTTCCAGAAAACTCTCATGTAGAAATAAAGCAATGCTAATGAGCATGGGCTAATTGATTCTTGGTTACTATGATTCCAGCACCTACAACCAAA ...x.....:...x..x..x..x...x..:x:x.x....:----------.x.:....x:.....x..x.x..x...:.....x.....x.:xx.x..:.:..:x..x.....x.............x:..:..x.....::.-----.x:.:.:..::.:.:---..:....xxx::.x...:xx:x.xx...x.x.----.....xx..:..----..x..-------.::.x..x.....::.:x..x..:.::...x::::.....:..x:.x..x..:x.::......x.x..:..x.....x.....:.xx..:..:.x......:..::..........:..:x.... 40M10D93M5I15M3I32M4I12M4I5M7I125M 211/322 65.5% 345/94230402 0.0% 33/322 10.2% 7389330 NA +3106 chr4 + 190214555 25760879 25760878 25760952 74 TTATCCTCCCTGTTTTATAGATGAGGAAACCGAGGCACAGAGTGGTTAAACAACTTGCCCAAGGTTACACAGCT chr4 - 94230402 15193220 15193219 15193293 79037110 79037109 79037183 74 TTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCT ....::...x::.......xx..::.:..::..::.x....xx::.x...:.....x..:.....:.:...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 10567659 NA +3092 chr4 + 190214555 25760885 25760884 25760932 48 TCCCTGTTTTATAGATGAGGAAACCGAGGCACAGAGTGGTTAAACAAC chr4 - 94230402 73089455 73089454 73089502 21140901 21140900 21140948 48 TCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAAC ..........:.....x......x:.........x.x...x...:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -47328570 -46901832 +7539 chr4 + 190214555 25765323 25765322 25765445 123 TACCTGGGAGTCTCCATCCAGGGCGGCTTGGGCGTACATCTGCACAGACAACTCCAGGTCTTGTGACTGGTTTTGGTGGCCATAGTAGTAAAGGTCTCCCATCTTCAAATATGCTGCAGGAAA chr4 - 94230402 18371310 18371309 18371432 75858971 75858970 75859093 123 TACCTGTGAATCTCCCTCTAATGCAGCTTGTGCATACATCCGCACTGACAGCTCAAGGTCTTTAGACTGGTTCTGGTAACCATAGTAGTAGAAATCTCCCATCTTCAAATAAACTGTGGAAGA ......x..:.....x..:.:x..:.....x..:......:....x....:...x.......xx........:....::...........:.::.................x:...::.:.:. 123M 96/123 78.0% 123/94230402 0.0% 0/123 0.0% 7394013 NA +14492 chr4 + 190214555 25767435 25767434 25767841 407 CTCACTTCACACA-AAGCTGT--CAGATGTTCCCTGTTACTAAAGATTAAAAACACCTA-ATGCTTCAATTTTGCACCGTTTTTCTATACATACCAAAGGAAGGAGCATCGATTTGAAAAACAGAGAAATTATAGTATCTCCAAACACAGTTAACACCCAAGTATCTCCTGGCCAGGTCCTAAGGGGTAAAGGGAAGAAAA--AGTTAATTCATTAATATTTCGGCCAAGTGACCAACGTTGCCTCCATAAAACCCAATTCATTATCCTTAACCTCAGAGCTTCTACTCTGAGAA-----------GAATACATTTACTTACTGGCCTCTCCTCACAGATGTGTGCTAAATTTGTCTGTGACACTTCAATTCCAGTTTCTGCTGCTAAAACATAATACAGCAAAGCTTCATGCCTAAAAATAGA chr4 - 94230402 18373445 18373444 18373830 75856573 75856572 75856958 386 CTCACTT-GCACAGAAGTTGCAACAAATGTAACTT----TTGaaaattaaaaaaatatatatataaaaattCAGAAAGAATTCCTTATACGTACCAAATGAGGGTGCATTGATTTGAGACACAGAGAAATTGTAGTATCTCCAAACACAATCAATTGCTAGGTATTTCCTTGCTAGATCCT----------TGAAAGAAAATGAATTCATCCATTTATATCGCACACAAGATATTAGGATCACCTTCCTA-----------------------CTAAAAGGTGTTCCTTTTAGAGTAAAGAGTTGTGAATACGTGCACTTACTGGCCTTTCTTCACAGATGTGTGCTAAATTTGACTGTGACACTTCAATCCCAGTTTCAGCTGCTAGGAGATAATGCAGCAAAGCTTCATGCCTGAAGTTAGA .......-:....-...:..:--..:....xx.:.----:.:..:........x.:x..-..::xxx....:x.x.xx:x..:::.....:.......x..:..x....:.......:.x...........:.................:.:..:xx.:.:....:....x..:..:....----------x.:.......--.:..x..:....x....:x.:xx....xx.::.:x:.::...:.x..-----------------------..x.:..x.x:.x..:.x...:-----------......:.x:............:..:......................x...............:........x.......::.x.....:..................:..:x.... 7M1D5M1I7M2I12M4D20M1I121M10D10M2I47M23D22M11I118M 276/369 74.8% 386/94230402 0.0% 55/369 14.9% 7393990 NA +3234 chr4 + 190214555 25772569 25772568 25772706 138 AAAAGGCAAGGC----AAGGCAAGGCAGAAG--GGAAAAG----GAAAGGAAAAGAAAGAAAAAAGAAAAGAAAAAAAGAAGGGAAAGAAAAGAGAGGAAGGAAAAGAAAAAAAGAAAAGAAAGAGAATCCAAATATTCATTAACAAG chr4 - 94230402 56098405 56098404 56098549 38131854 38131853 38131998 145 AAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGA---GTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGAG ..:.:.x.....----.::..x:..x.:...--....:..----..xxx:..x....:...x.:...---.xx......x...:.:.:....:..:::...x..:..:::::..:...:xx........:....x:xxx.....::.. 12M4I15M2I7M4I23M3D78M 88/135 65.2% 145/94230402 0.0% 13/135 9.6% -30325836 -63904566 +3136 chr4 + 190214555 25772573 25772572 25772659 87 GGCAAGGCAAGGCAAGGCAGAAGGGAAAAGGAAAGGAAAAGAAAGAAAAAAGAAAAGA----AAAAAAGAAGGGAA--------AGAAAAGAGAGGAAG chr4 - 94230402 536626 536625 536724 93693679 93693678 93693777 99 GGCAGAGCGGGGAAAGGGGAAAGGGAGGGGGAAATGAAAAGAAAGAAAACAAAACAAAGCCCAAATGAGAAACACATCCGCTGCAGGAATGGGAGGAAG ....::..::..x....x::......:::.....x..............x.:..x.:.----...x:....:x:x.--------..:..x.:....... 58M4I14M8I15M 62/87 71.3% 99/94230402 0.0% 12/87 13.8% 25235947 NA +3160 chr4 + 190214555 25772601 25772600 25772669 69 AGGAAAGGAAAAGAAAGAAAAAAGAAAAGAAAAAAAGAAGGGAAAGAAAAGAGAGGAAGGAAAAGAAAA chr4 - 94230402 15056512 15056511 15056580 79173823 79173822 79173891 69 AAGAATGGATAGGAAAGAAAAAAGAAAAAAAAAAAGGGGGGGGAAGCAATGAAGCTGAGCTCAAGAAGA .:...x...x.:................:......:.::...:...x..x..::xx:..xxx.....:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 10716089 NA +3003 chr4 + 190214555 25772603 25772602 25772648 46 GAAAGGAAAAGAAAGAAAAAAGAAAAGAAAAAAAGAAGGGAAAGAA chr4 - 94230402 88745527 88745526 88745572 5484831 5484830 5484876 46 GAAAGGGAAAGAAAGAAAAAAGAAAAGGGAGTAAAAAGGACAGGAA ......:....................::.:x..:....:x.:... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -62972924 -31257478 +3454 chr4 + 190214555 25772606 25772605 25772825 220 AGGAAAAGAAAGAAAAAAGAAAAGAAAAAAAGAAGGGAAAGAAAAGAGAGGAAGGAAAAGAAAAAAAGAAAAGAAAGAGAATCCAAATA------TTCATTAACAAGAGAACTGGGAAATAAATTGTGATCTGTTACAGCAGTGAATATGAATGAGCTACAGGTACATGCATCAAAATGTGTGAATCTTATTTTTATTTATTTATTTATTTTTTTTGAAAGGGAGT chr4 - 94230402 7739259 7739258 7739472 86490931 86490930 86491144 214 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAACATATTGTTTCAACATCTTGGAAAC---AAAATGGATTGTTTTCTTTCTCA------AATACAAAAGTGTTTCATTTCAA--CATCTTCACATTTGTATCTCAAAACAGCTT-TTTTTTTGTTTGTTTTAAAAAAGAAT ..::::.:...x.:.:::.::::.:......:...::.:......x:x....:..:..xxxx:....:....:...:.:...:x...:.------....x:.x.xx.::...---:....::.....xx...x.:x..------....::..x.x.:.x..xx.xx.--....xxx.::.x..x....:.xxx:x::..-...x...:...x....:...::..:. 89M6I17M3D23M6D23M2D30M1D26M 125/208 60.1% 214/94230402 0.0% 18/208 8.7% 18033347 NA +3026 chr4 + 190214555 25772643 25772642 25772686 44 AAAGAAAAGAGAGGAAGGAAAAGAAAAAAAGAAAAGAAAGAGAA chr4 - 94230402 81167076 81167075 81167119 13063284 13063283 13063327 44 AAAGAGGAGAGGAACAGGAAAAGAAAAAAAAAAAAGAAAGAGGA .....::....:::x...............:...........:. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% -55394433 -38835969 +6292 chr4 + 190214555 25776268 25776267 25776387 120 CAAGC-TTACCATGAACCTTCCAGGTAGGCATTGAGGCCTTTGCGGATGACATGGCCCAAGTAGCCATTTTTCTCAGCTACATGTTTTGCCCATCTGAAAAAAAAAAGGGAAGAGAAAATA chr4 - 94230402 18374617 18374616 18374734 75855669 75855668 75855786 118 CAAGCATTACCATGAAAGTTCCAGATAAGCATTGAGTGCTTTTCTAATGACATGACCTAAATAGCCATTCTTCTCCGCAACATGCTTTGCCCAGCTGTAGAAAAGAA---CAAAGAAAACA .....-..........xx......:..:........xx....x.x:........:..:..:........:.....x..x.....:........x...x.:....:..---x.:......:. 5M1I101M3D11M 94/117 80.3% 118/94230402 0.0% 4/117 3.4% 7401651 NA +8252 chr4 + 190214555 25779071 25779070 25779214 144 CTTACACAACAGCTTTCTCAGGATCTCTAGGGAATGTCTCCAGGTTGCCTGTGATATAGTAGAGAGAACACCACAAGGTCCCTTCCATGTGTCCACCTTGCGCAGCCTTATGGAAATATTCACCAGCTAAAGTCTGTAACAAGA chr4 - 94230402 18375825 18375824 18375968 75854435 75854434 75854578 144 CTTACATTACAGCTTTTTCTGGATCTCTGGGGAATTCTTCCATATTTCCCGTGATGTAGTACAGAGAACATCGTAAAGTCCCTTCTATATGTCCTCCTTGAGCAGCTTTATAGAAATATTGTGCAGCTACTGTCTGTGAAGAAA ......:x........:..x........:......x::....x:..x..:.....:.....x........:.::..:........:..:.....x.....x.....:....:........xxx......xx......:.x:.:. 144M 111/144 77.1% 144/94230402 0.0% 0/144 0.0% 7403246 NA +11004 chr4 + 190214555 25782236 25782235 25782436 201 ACTCACTTGATTCCTTCCAGGAACTCCAGGGAAGATGCCATCCAAATGCAGGACTCCAAGATTGTATGACGCATCTGGGTTCCCCATTTCTTCTGCTTTTAACCAGTACTTTGCTGCTTTGGCGTAATTTTTCTTGAATTTGTGGTAATACCATCCCAGGCCATTGACTGCCTGATGCAATCCCTGAATTTTGGAACAAGA chr4 - 94230402 18379739 18379738 18379935 75850468 75850467 75850664 197 ACTCACTTGATTTCTACCGGGTACTCCAGGGTAAATCCCATCTAAATAAAGGACTCCAAGATTGTAGGATGCATCTGCATTTCCCAGTTCTTCAGCAATTAACCAGTGCTTGGCTGCTTTTCTGTAGTCTCTTCTAAAATTGTGGTAATACCATCCCAGTCCATTCACCGCTTGGGGCAGGCCCTAGG----GGAAGAAGA ............:..x..:..x.........x.:..x.....:....:x.................x..:.......x:..:....x......x..xx.........:...x........xx:...:.:.:.::.:..x....................x.....x..:..:..:x...:x....:::----....x.... 188M4D9M 154/197 78.2% 197/94230402 0.0% 4/197 2.0% 7402497 NA +11109 chr4 + 190214555 25782236 25782235 25782420 185 ACTCACTTGATTCCTTCCAGGAACTCCAGGGAAGATGCCATCCAAATGCAGGACTCCAAGATTGTATGACGCATCTGGGTTCCCCATTTCTTCTGCTTTTAACCAGTACTTTGCTGCTTTGGCGTAATTTTTCTTGAATTTGTGGTAATACCATCCCAGGCCATTGACTGCCTGATGCAATCCCT chr4 - 94230402 18376533 18376532 18376717 75853686 75853685 75853870 185 ACTCACTTGATTTCTACCGGGTACTCCAGGGTAAATCCCATCTAAATAAAGGACTCCAAGATTGTAGGATGCATCTGCATTTCCCAGTTCTTCAGCAATTAACCAGTGCTTGGCTGCTTTTCTGTAGTCTCTTCTAAAATTGTGGTAATACCATCCCAGTCCATTCACTGCTTGGGGCAGGCCCT ............:..x..:..x.........x.:..x.....:....:x.................x..:.......x:..:....x......x..xx.........:...x........xx:...:.:.:.::.:..x....................x.....x.....:..:x...:x.... 185M 147/185 79.5% 185/94230402 0.0% 0/185 0.0% 7405703 NA +5012 chr4 + 190214555 25784219 25784218 25784349 131 ATGTGTTACCTTGGAAGCTGCTTTCTTCATCAGCTCTAAGGCAAGCCGTCTGTTCTTTTTTACTCCTTGACCCTAA-----ACATTGATAAACAG-CGATGATTACAA--AGAAAATACA-----ACCAGACTGCACACATACA chr4 - 94230402 18382892 18382891 18383035 75847368 75847367 75847511 144 atattttaCCTTGGCTGCTGCTTTCTTCATCAGTTCTAAAGCAAGTTTTATGTTCTTTTTCACACCTTGGCCCTAGGAAATGTATAGTGAAACAATCATTGCTTACAATTACAGAATACATGCTGATGAAAATTCACATATATA ..:.x.........xx.................:.....:.....::x.x..........:..x.....:.....:-----::..x.xx.....:-.:x..x......--.x.:......-----.:x.:.x.x....:...:. 76M5I14M1I12M2I10M5I19M 99/131 75.6% 144/94230402 0.0% 13/131 9.9% 7401327 NA +5012 chr4 + 190214555 25784219 25784218 25784349 131 ATGTGTTACCTTGGAAGCTGCTTTCTTCATCAGCTCTAAGGCAAGCCGTCTGTTCTTTTTTACTCCTTGACCCTAA-----ACATTGATAAACAG-CGATGATTACAA--AGAAAATACA-----ACCAGACTGCACACATACA chr4 - 94230402 18378974 18378973 18379117 75851286 75851285 75851429 144 atattttaCCTTGGCTGCTGCTTTCTTCATCAGTTCTAAAGCAAGTTTTATGTTCTTTTTCACACCTTGGCCCTAGGAAATGTATAGTGAAACAATCATTGCTTACAATTACAGAATACATGCTGATGAAAATTCACATATATA ..:.x.........xx.................:.....:.....::x.x..........:..x.....:.....:-----::..x.xx.....:-.:x..x......--.x.:......-----.:x.:.x.x....:...:. 76M5I14M1I12M2I10M5I19M 99/131 75.6% 144/94230402 0.0% 13/131 9.9% 7405245 NA +10493 chr4 + 190214555 25788219 25788218 25788377 159 CTTACCTTGAATAGCACAATGGCATAGTCATAGATTAACGCAGGATCCTCCGTCTCCAGGGCGCCCTTGGCGTACCACTCAATTGCTGCTTCGGGATTCTTGGCCACACCTTGCTGCCCCCAGAACAGCATCTGGGCCAATCGTTGCTTAAAGATAATA chr4 - 94230402 18383187 18383186 18383345 75847058 75847057 75847216 159 CTTACCTTAAACAACACAATGGCATAATCATATATTAACACTGGATCTTCTGTTTCTATTGCACCCTTTGCATACCATTCTATTGCTGCTTCAGGATTTTTTGCCACTCCTTGTTGGCCCCAAAACAGCATCTGAGCCAATCGTTGCTAAAAGAAAACA ........:..:.:............:.....x......:.x.....:..:..:..:.xx..:.....x..:.....:..x...........:.....:..x.....x.....:..x.....:...........:.............x.....x..:. 159M 130/159 81.8% 159/94230402 0.0% 0/159 0.0% 7405032 NA +10493 chr4 + 190214555 25788219 25788218 25788377 159 CTTACCTTGAATAGCACAATGGCATAGTCATAGATTAACGCAGGATCCTCCGTCTCCAGGGCGCCCTTGGCGTACCACTCAATTGCTGCTTCGGGATTCTTGGCCACACCTTGCTGCCCCCAGAACAGCATCTGGGCCAATCGTTGCTTAAAGATAATA chr4 - 94230402 18379265 18379264 18379423 75850980 75850979 75851138 159 CTTACCTTAAACAACACAATGGCATAATCATATATTAACACTGGATCTTCTGTTTCTATTGCACCCTTTGCATACCATTCTATTGCTGCTTCAGGATTTTTTGCCACTCCTTGTTGGCCCCAAAACAGCATCTGAGCCAATCGTTGCTAAAAGAAAACA ........:..:.:............:.....x......:.x.....:..:..:..:.xx..:.....x..:.....:..x...........:.....:..x.....x.....:..x.....:...........:.............x.....x..:. 159M 130/159 81.8% 159/94230402 0.0% 0/159 0.0% 7408954 NA +7633 chr4 + 190214555 25790448 25790447 25790601 154 TTTTTACCTGAGCTGCTGCATTGCCTCGGGTAGCTTCATGCTTCAACCACATAAAGACATCTCCATCTTCTTTGGTTTGTACCTTGAGTATTTCATCATCTTTTAGTCTAATTGTTTCAACATATGCCTGAGAAGGAAGGAGGGAAAGAAGGAA chr4 - 94230402 18385417 18385416 18385568 75844835 75844834 75844986 152 TTTATACCTGTGCAGCTGCATTTCCTCTTGATGCTTCATGTTTTAACCACATAAAGACATCGCCGTTTTCTTTTGTTTGAGCTTTAAGCAGCTCGTCATCCATTAGCCTTATAGTTTCAACAAATGCCTGAAGAGTA--GATGAACAGAACAAA ...x......x..x........x....xx.xx........:..:.................x..:.:......x.....x:.:..:..:.x:..:.....:x....:..x..x.........x........::..x.--..x.:.x....x:.. 137M2D15M 116/152 76.3% 152/94230402 0.0% 2/152 1.3% 7405031 NA +7640 chr4 + 190214555 25790448 25790447 25790586 139 TTTTTACCTGAGCTGCTGCATTGCCTCGGGTAGCTTCATGCTTCAACCACATAAAGACATCTCCATCTTCTTTGGTTTGTACCTTGAGTATTTCATCATCTTTTAGTCTAATTGTTTCAACATATGCCTGAGAAGGAAG chr4 - 94230402 18383888 18383887 18384026 75846377 75846376 75846515 139 TTTATACCTGTGCAGCTGCATTTCCTCTTGATGCTTCATGTTTTAACCACATAAAGACATCGCCGTTTTCTTTTGTTTGAGCTTTAAGCAGCTCGTCATCCATTAGCCTTATAGTTTCAACAAATGCCTGAAGAGTAGG ...x......x..x........x....xx.xx........:..:.................x..:.:......x.....x:.:..:..:.x:..:.....:x....:..x..x.........x........::..x.:. 139M 107/139 77.0% 139/94230402 0.0% 0/139 0.0% 7406560 NA +10438 chr4 + 190214555 25802275 25802274 25802484 210 TCTCATACCTGATCTCCTTGCAGTGTGTGCTGGTCAAGGGGTGTCTTGGTGGCAATGTTGCTGTAGTAGGCATACGACAGTTCCCAGTCCAGGGGGTAGTTGTCAATACCCTGGTAGTGTTTATACCCAAGATTCATTGAAGACAGCCTCTCACTCCCCTGGCCTCCAACCAAACTATACAACATGCCCTGTTAGGAAGAAATTGACAAA chr4 - 94230402 18386602 18386601 18386811 75843592 75843591 75843801 210 TCTTTTACCTGTTCCCCTTTTATAGTGTGTTGATCCAAGGAGGTCTTTATTGCAATATTACTGTAATAAGCATATGACAGCTCCAAATCAAGTGGATAGTTATTAATGCCTTGGTAATGCTTATAGCCAAGATTCATCACAGCAAGTCTCTCATTCCCCTGAGCCCCAACCAGACTGTACAGCAGTCCCTGGCAAAAATCAACAGAAAAA ...:x......x..:....x:.xx.....:..:..x.:..:x.....x:.x.....:..:.....:..:.....:.....:...x.:..x..x..:.....:.:...:..:.....:..:.....x...........::x..xx..:......:.......:x.:.......:...:....:..xx.....x:.::..xx..:x..x... 210M 151/210 71.9% 210/94230402 0.0% 0/210 0.0% 7415673 NA +3277 chr4 + 190214555 25805992 25805991 25806076 85 TTCCGTGAAAAATTAAAATGTTGTGG--GTTTTTTTTGTTTTGTTTTGTTTGTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGT chr4 - 94230402 45862888 45862887 45862974 48367429 48367428 48367515 87 TTGCTTAAGAAAGCAAATTTTTTTTGTTGTTTTTTTTGTTTGGGTTTGTTTGTTTCTTTTTTCCCCTCATATAGACTTCTATTCTGT ..x.x.:.:...x:...x.x..x.x.--.............x.x...........:......::::.x.x..:..x.::.::..... 26M2I59M 60/85 70.6% 87/94230402 0.0% 2/85 2.4% -20056896 -74173506 +3192 chr4 + 190214555 25806011 25806010 25806052 42 GTTGTGGGTTTTTTTTGTTTTGTTTTGTTTGTTTTTTTTTTT chr4 - 94230402 3414705 3414704 3414746 90815657 90815656 90815698 42 GTTATGGGTTTTTTTTGTTTTGTTTTGCTTTTTCCTTTTTTT ...:.......................:..x..::....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 22391306 NA +3057 chr4 + 190214555 25811739 25811738 25811779 41 TCTTTTCCTGTTTTTTTTTTTTTTTTTTGTTGTTGTTGTTG chr4 - 94230402 76612835 76612834 76612875 17617528 17617527 17617568 41 TTTTTTCATGTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTG .:.....x...x..x.......................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -50801096 -43429306 +4073 chr4 + 190214555 25816241 25816240 25816338 98 AATTTATTGAACC---CAATAC---TAGAAGACAGATA-CTATTATCATCCCCATTTTGCAGATGAGGAAACTAAGGCTCAGAGAAATTAAGTAACTTGCCCAAA chr4 - 94230402 10729155 10729154 10729259 83501144 83501143 83501248 105 AATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGA ....x...x.:..---......---.:x:..::..:..-:..:.....x.:.......:...:..:.:.....:....x..x.x.::........:.......:. 13M3I6M3I13M1I66M 73/98 74.5% 105/94230402 0.0% 7/98 7.1% 15087086 NA +3062 chr4 + 190214555 25820742 25820741 25820795 54 TGTACTGTTCATGATATTAAACACATTTCTTTCTTTCTTTTTTTAATTTTTTTT chr4 - 94230402 13854373 13854372 13854426 80375977 80375976 80376030 54 TGTATTATTCATAAGATAAAATGTCGTTCTTTCTTTCTTTTTTTAATCTTTATT ....:.:.....:.x..x...:::xx.....................:...x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 11966369 NA +6608 chr4 + 190214555 25822018 25822017 25822133 116 AGGCGATAGTACTTCAGGGGTCCAAAAAACCCTTCAATGCCAGCCACATACCTGCTCCCTCCAATAATGAAGTACCCAGCTGTGTCATTATAATGGAAATCCTCCCGGAAGCTAGA chr4 - 94230402 18390970 18390969 18391085 75839318 75839317 75839433 116 AGACGATAGTACTTCACAGGTCCAAAGAATGCTTCAATACCATTTACATATCCACTACCTCCAAGGACAAAATATCCAGCCGTGTCATCGCAGTAGAAATCTTCCCTGAAACTTGA ..:.............x:........:..:x.......:...x::.....:.::..x.......x:.::..:..:.....:.......:::.:.:......:....x...:..x.. 116M 86/116 74.1% 116/94230402 0.0% 0/116 0.0% 7431048 NA +8149 chr4 + 190214555 25832984 25832983 25833152 169 CATACAGATACCTGGCCTCCGTTAAAAGAGATATCCAGTCGAAACCACTCCTTCAAAGGTATGATGAATTTAGTTTTTACAGCAAGGTCTTCCCCTTTGACAAGATGCATCTGAATATGCAAATAGCCTAAAAGGAAAATTCGAGCACATGAAAATGAGCAAAAAATAT chr4 - 94230402 18392606 18392605 18392762 75837641 75837640 75837797 157 CAGACATGTACCTGTCCACCCTTAAAAGAGAGATCCAGTCGAAACCACTGCTTCAGAGGAAGGCTGAAGCTTGTTTTCACTGCAAGGTCATCTCCCCTAATGAGGTGCATCTGAATATGCACATAACCTGACAGAAAAAC------------AAAGGAGAAAAATATAT ..x...x:......x..x..x..........x.................x.....:...x.x.x....x:.x.....:..x........x..:..::.:.::..:................x...:...:.x..:....:------------...x...x....x.... 140M12D17M 123/157 78.3% 157/94230402 0.0% 12/157 7.6% 7440378 NA +6354 chr4 + 190214555 25833443 25833442 25833592 150 CTCACCCTCTTCCGTAAGAAATACAGAAGGTGTGCCGTACATCTCATTAGAGTCAACAAAGTACAGAATCCCACAGAGGTTGGCCTTGCAATAATGGAGTAAATAAAGCCACAATGAAACAGTAAACCTATAAGAGTGAGGGGGAAAAAA chr4 - 94230402 18394433 18394432 18394578 75835825 75835824 75835970 146 CTTACCTTCCTCATTTAGAAATATAGCAGGAGTACTATACATCTCTTTTGGATCAATAAAATAGAGTATACCACACAGATCCTTTTCACAGTGATGCAGTAAATATAGCCAGATTGAAACAGTGAACCTGCA----TGAGGGAAAACAAA ..:...:..:..xx.x.......:..x...x..:.::........x..x.::....:...:..x..x..x.....x..:.:xx::.::..:.:...x........x.....x.x.........:.....::.----......::..x... 132M4D14M 104/146 71.2% 146/94230402 0.0% 4/146 2.7% 7439010 NA +24239 chr4 + 190214555 25847288 25847287 25847895 608 ACCTACCATTTTCCAGAGGACACTGTGGAATCCTGTTTGCCCGAAGGTTCCAAATATAACCCATGTTCCACTCAAGGCACACTTGATGATCTTTGAAAGGGCGTTCAAAAGGCGGGATGGTCTGCAGGAGGGTATAATTCTTTGCTACAGCATGGAGCAAGTTTTCCTCCCATTTAACATTCCAGTCTCTGCCACTGTATTTGTGAGTAATCCAGGCGCGTACTATCACTGCAGATACAGAGATGGAATGTCTGATGAAATAATCATCTCTGTAAACCATAATGCTTGGAAATTTCACATGTACTATTTGTGTCCTGCTGGTGTGAAGATGTTTCTCATTCTTCCACCTTTTTTTGTACACGGGAATGCTACTTCTGAACTCAGATGAAACAACTGCTTCCAAATTGACAACACAAGGCTGAGAGCATAAATACTCAACCGAGACTTCAGAAACGTTGCGAACGTTTCCTTCAAAGACAGTAAAATAAATAAAGTCTTTGTAAGCCACGCTCTGCTCAGCTTTGGGTATCACTGATGTCGTCAGGGAAGTCTGCCTACCCAAAGATGGTACAACATTCTG-AAAAAAAGAAAAAGAAAGTAAGAAATAC chr4 - 94230402 18399994 18399993 18400599 75829804 75829803 75830409 606 ACATACCGCTTTCATGAGGGCACTGAGGTATCTTGTTTGCCTGAAGCATCCACAAATAGTCAGCACCCCACTGAAGACAGACTTTGTGGTCTTTATACGGGCGTTCAAAAGGTGGAACTGCTTCTAAAAAAGTGTAATTCTTGGCAACTGCCTCCTGGTAGCTTCCATTCTGCTCAGCATCATAG---CTGCTAACTGATTGGTGACTAATCCATGCATATAATATCACACTGTGCACTATTATTGAGTTTCTGATGATGTAATCATCTCTGTAAACCATGATGCTTGGAAATCTCAAATGTATTTGTCGAGTCTGACGAACATAAATATTCTTCTCATCCTTCCACCTCCTTCTGTATACTGGTACACCAGTCCTGAACTCTGAGGAAGCTACTGCTTCCAAATTAATTATACAAGGCTTAGAGCATAAATACTGAACAGAAACCTCAGAACTGTTAAGGACTTTCTTTTCCAAAACATTTAAATGAATGAAGTCCACATAATCCATCTTTTTTCCAAACTGTGGTGTAACTGCTGTTGTCCGTAATGTCTCCTTTCCAAAAGATGGCACAAAATTCTGTAAACAAAAAAACACAACAAAAGAATTAC ..x....::....xx....:.....x..x...:........:....xx....x.x...::.x:::::.....x...:..x....x:..:.....:x.x..............:..:.:x.::.x:.::.::..:........x..x..x..x.xxx.xx..:..:.x.:.:::.:.:...:x:..---....:.x:xx...x....x.......x..:::..x......xx::x::..x:xx..x..:.x........x:....................:............:...x.....:.xx.:.x...:x:.x::::.:..x..x:.......:.........::..:....:..x..x.::.:.x.:........x..x...:.x..............:.:x.:........x..............x...x..:..:......x:...:x.:..x..:::...x..:...x.x....:...:.....:x::...x...:x:.:.x::..:x:.xx...:.x....x...:...x.x:.x....x.:.x..x........:....x......-...x...:...x.x..x:x.....x... 185M3D392M1I28M 413/605 68.3% 606/94230402 0.0% 4/605 0.7% 7447294 NA +3057 chr4 + 190214555 25850771 25850770 25850862 92 AGAAAATGGAATGATCGCAAAGG---GTTTTCTGTCTGGTTTTTTTGTTTGTTTTTGAATTTTCAGGGTTTTCTTTTTTTTGTTTGTTTGTTTTT chr4 - 94230402 39399587 39399586 39399679 54830724 54830723 54830816 93 AAAAACTGTAATACTTGCTGAGGTGGGTTTTAGAGTTTCTTTCTTTCTTT--TTTTAAGTGTGTGGGTTTTTTTTTTTTTTGTTTGTTTGTTTCT .:...x..x...:x.:..x:...---.....xx:x:.xx...:...x...--....:.:.x.x::..x....:....................:. 23M3I24M2D43M 64/90 71.1% 93/94230402 0.0% 5/90 5.6% -13548816 -80681586 +3038 chr4 + 190214555 25850827 25850826 25850870 44 TTTTCAGGGTTTTCTTTTTTTTGTTTGTTTGTTTTTTTTTTTGA chr4 - 94230402 78360648 78360647 78360691 15869712 15869711 15869755 44 TTCCTAGGGTTGTTTTTTTTTTGTTTGTTTGTTGTTTTTTTTAA ..:::......x.:...................x........:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -52509821 -41720581 +3108 chr4 + 190214555 25883388 25883387 25883451 64 CTTGCCCGGTTTCTAGAACTCACTGTCTCTCTGTCTCTCTCTCTCTCTTTTTTTTTTTTTTATG chr4 - 94230402 18929885 18929884 18929948 75300455 75300454 75300518 64 CTTGTACTGTCTGCAGATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ....:x.x..:.x:...xxx:....xx.:...x.............:..............x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 6953503 NA +3044 chr4 + 190214555 25887389 25887388 25887444 56 CTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAG chr4 - 94230402 49250037 49250036 49250092 44980311 44980310 44980366 56 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGG ..:....::.xx.........:..........:.::x::..:..:.........:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -23362648 -70867754 +3307 chr4 + 190214555 25887414 25887413 25887474 61 AAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAA chr4 - 94230402 28315469 28315468 28315529 65914874 65914873 65914934 61 AAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGGAAAGAA ..:.x.......x....x....x.:x....:x...:.........:.....x:.:...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -2428055 -91802347 +3168 chr4 + 190214555 25887424 25887423 25887501 78 AAAAAAAAAAAAAAAGGAAAGAAAGAAAGTAAAGAAAAGAAAGGAAAAGAAAAGAGAAAAGAACAGGGCTGGCAAGTT chr4 - 94230402 32280614 32280613 32280691 61949712 61949711 61949789 78 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTT ............:..:........::.....xx.:......x::::.x.:.:x:x....:..:..x:..x.xx:.... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -6393190 -87837212 +6217 chr4 + 190214555 25914211 25914210 25914429 219 CCTCTCCACCTCTTCCGAGCGGGGTCACGGCCCGGCCGT------CGGTAACCTGGTTTCCGAGAGTGCCGGGCGGTCGGCGGGTCAGGGCAGCCCGGGGCCTGACGCCATGTCCCGGAACCTGCGCACCGCGCTCATTTTCGGCGGCTTCATCTCCCTGATCGGCGCCGCCTTCTATCCCATCTACTTCCGGCCCCTAATGAGATTGGAGGAGTACAGTGAGTG chr4 - 94230402 18408653 18408652 18408857 75821546 75821545 75821750 205 CCTCCCCGCTCCGCCCG--CCGGGCCCCGTCTCGCCCGGAAGCGGCGGCCGCGGAGCTTCCG----TCCCGGACG----------CGGGGCGTCCC----TCCGCCGCCATGGCCAGGCTGTTCCGCACGCTCGTCATCTTCGGCGGCTTCGCGGCCGTGGTGGGGGCCGCCTTCTACCCCATCTACTTCCGGCCGCTGCTGCTGCCCGAGGAGTACAGTGAGTG ....:..:.::.x:...--.x...:.x..x.:..x...x------...:x:.xx:.:.....----.x....:..----------.:....:x...----:.:.x.......x..x..xxx:.x.....xx:xx....:............::xx..x..:.x..x...........:.................x..:x..xx:::x................. 17M2D20M6I17M4D9M10D11M4D125M 140/199 70.4% 205/94230402 0.0% 26/199 13.1% 7505558 NA +3393 chr4 + 190214555 25919414 25919413 25919486 73 CTGCAACCTCTGCCTCCTGGATTCAAGCAGTTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:....:......::x...x.xx.x........:............:.:....x.::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 7722288 NA +5119 chr4 + 190214555 25928289 25928288 25928376 88 TGATTTTTCTCTTATGTTTCTCAGAGAAGGAACAAGCTATAAATCGGGCTGGAATTGTTCAAGAGGATGTGCAGCCACCAGGTAAACT chr4 - 94230402 18410743 18410742 18410830 75819573 75819572 75819660 88 TGTTCTTTCTGTTTTGTTTTCCAGAGAGAGAACAGTCAATAAACCGAGCTGGTATTGTTCAAGAGAATATCCAGCCTCCAGGTATACT ..x.:.....x..x.....::......::.....:x.x.....:..:.....x............:..:.x.....x.......x... 88M 69/88 78.4% 88/94230402 0.0% 0/88 0.0% 7517546 NA +5119 chr4 + 190214555 25928289 25928288 25928376 88 TGATTTTTCTCTTATGTTTCTCAGAGAAGGAACAAGCTATAAATCGGGCTGGAATTGTTCAAGAGGATGTGCAGCCACCAGGTAAACT chr4 - 94230402 18407372 18407371 18407459 75822944 75822943 75823031 88 TGTTCTTTCTGTTTTGTTTTCCAGAGAGAGAACAGTCAATAAACCGAGCTGGTATTGTTCAAGAGAATATCCAGCCTCCAGGTATACT ..x.:.....x..x.....::......::.....:x.x.....:..:.....x............:..:.x.....x.......x... 88M 69/88 78.4% 88/94230402 0.0% 0/88 0.0% 7520917 NA +3445 chr4 + 190214555 25929127 25929126 25929207 81 TGTTTTTGTTCCTGTTTCTTTCCATAGGGTTAAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGAGGGCTGTCATCAGC chr4 - 94230402 18412028 18412027 18412097 75818306 75818305 75818375 70 TATTTTTGTATTTGATTT-----GTAGGGTTAAAAGTGTGGTCTGATCCATTTGGAAGAAAGTAA------TGTTGCCAGC .:.......x::..x..:-----:...............................x..:..:.:.------...:::.... 18M5D42M6D10M 56/70 80.0% 70/94230402 0.0% 11/70 15.7% 7517099 NA +3605 chr4 + 190214555 25961832 25961831 25961905 74 CTGCAGCCTCAAACTCCTGGGCTCAAACGATCCTCCCACCTTAGCCTCCCACGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..:..:.....:....::.x.:.x.xx:x..:.....::..x......:.:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 7764706 NA +3539 chr4 + 190214555 25975384 25975383 25975491 108 TTAATCCTCACCATGGCCCTACAAG-TAGGTT-CTGTGAATATCCCCATTCTACAGATGAGGAAACGGAGGGCCAGGGAGGTTAAGCAGCTTGCCCAAAATCACGGTGTA chr4 - 94230402 10729161 10729160 10729270 83501133 83501132 83501242 110 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACA ..x.x......x..:x....:::..-.....x-:.::x.x:.x.:.....:.....:..:.:....x....xx..x:x........:.::.......:.:..xx...::. 25M1I6M1I77M 72/108 66.7% 110/94230402 0.0% 2/108 1.9% 15246223 NA +3048 chr4 + 190214555 25995037 25995036 25995090 54 CAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAGAA chr4 - 94230402 4077718 4077717 4077771 90152632 90152631 90152685 54 CACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAA ..x.....:.:.::x...x.............x.:.....:.::...:...... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 21917319 NA +3667 chr4 + 190214555 26008378 26008377 26008456 79 CTGCCACCTCTACCTCCTGGGTTCAAGGGATTCTCCTGTCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.x:..:xx.x..:...........x.x...x.xx.x........:............:.:....--....::.... 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 7811252 NA +3206 chr4 + 190214555 26011208 26011207 26011274 67 AATTTAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTATGT chr4 - 94230402 19704273 19704272 19704337 74526066 74526065 74526130 65 AATCTAAATACATATATACGTATATATTT--GTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...:......:.......::.......x.--....:...x::.............xx:...xx:... 29M2D36M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 6306935 NA +3059 chr4 + 190214555 26011216 26011215 26011265 50 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTCTG chr4 - 94230402 19704277 19704276 19704326 74526077 74526076 74526126 50 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x...:.......::.......x.....:...x::...........x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 6306939 NA +3067 chr4 + 190214555 26011217 26011216 26011267 51 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTCTGTC chr4 - 94230402 3262306 3262305 3262356 90968047 90968046 90968097 51 ATATATTTATAAAGATATATACATGCATCTGTGTGTTTGTGTATGTCTGTC ......x....x.x.......::..::.x.......x.....:........ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 22748911 NA +18573 chr4 + 190214555 26022322 26022321 26022837 516 GAGGGAAGAGGGAGAAGCCTTGGCAATTTGTTTTTAATATTTTTGCTTGTTTTGGATGCCACGAAAGCCTCATATATTGGCTCTTGACTAATAAAAACAGAGGAGAAGCCAGGCTGGAAACCTGGCTGTGTTTCCGTGCACAATTAGGTTTGTTTGTTTAGGTCTCTTTTTATTTGTTTTCAGATGACTCAGATATGAATACTGCAGGCCTTTCAAAGTGAAGTGTTCATATGTGTATTTTAGGTCTAGGGCTTCGCCAAGTGCAGAAAGACTTGGCTCCCTGAGGTTATTTTCCTATCCAGGGGTTTTTCAAACTTTCAAGTGGAGCTGAA-GAATGCTGCTGCAA-GCCAGGTTCTTTTTCTTAGCAGATCCCAGCTTGGGGTTGTAGGGGGGACAGGGATTGCAAACAT--------ACAAACACAAAAATCCCCAAACAGTGCACAAGGGCACCCATTGTGCTGATCCCGGCACTGCCTCTCCCTGATGGCTTTACCAT----CTGCATACTTCCGTCATCTCTGG chr4 - 94230402 18432882 18432881 18433381 75797022 75797021 75797521 500 GAAGGGAAAAAAACAACATTTGGCAATTTGTTGTCAATATTTGTA-TAACTCCTGATGCCACTAAAACTGCATATGCAGGCTTTAAACTAACAAAAACAAAGCCATGGCCAAGCTGGAAAGCTGGATTTGTTTCCACGCACAATTAGGTTTATTTGTTTAGGTCTCATTTTATTTGCTTTCAGATGACTCAGATAGGAGTATTGCAATCTTTTCAAAGTGAAGTAGTGTTCTGTGTATTTTGGGCATTGCGCTTAGCCAAATGTGGAAAAAACTGGCTGCTCAATAGTATTTTCCTATCCAGAGGTTTTTCAAACTTTTGAGAGGAACTGAAGGAATGTCCCTTCCATGCCAGGCTTTTTTTTTT------TCCCCCCTT--------------CATAGCGTCTCTCCACATCATTGTTAAAGAGCACAGGAATTTTAAAACACT---------CCTCCGTTGTGCAACTGTTAGCAACTGCCCTTATTAATTGCTTTAACATTATGTTGCATGCTTAAATTCTCGCTGG ..:..:.:.:::.x..xx:.............x.:.......x.:-.x::.::x........x...:.:x.....::x....:.x:.....:.......:..xx:x:....:........x....x.x.......::..............:..............x.........:..................x..:..:....:x.:..............:x.xx.x..........:..:x.x.x....x.....:..::....:.x:.....x.:::.x:x...............:...............::..x...:.....-.....::x..x.x.-......:.:.....:..------....xx...--------------x.:..x.x:.x:xx....--------.x:.:....::...:::x.....x.---------.x:..:......x:x.x:::...x:xx.:..:x:.:..x......x...----:.....:...xx:.:x..x.... 45M1D286M1I14M1I17M6D9M14D18M8I25M9D49M4I23M 347/486 71.4% 500/94230402 0.0% 44/486 9.1% 7589440 NA +9341 chr4 + 190214555 26032782 26032781 26033263 482 GTGTTACATAGGCTTACGCTCAGCCTTCATCAGAGAACAATTAG-GACGAGTGTGGGGGAGGCCACAGGGTCAGGGATGACAGATGGGCCTCCACTTAAGCAGGTTAGAAGTTCAGTTGCTCAGGAGGAAGAAGACCCATCTTTGTCTGGGGAGCACAGGGTTGGGTAGAAAGGGGA----AGAATGGAAATA-AGGCAGAAGGCCTCTCTTTTCTGAAATATCCCTTAGGGATAAGTCCCTATATCTTAAGCAGTTGTTTTAGTTTTCCCTGAAGAAGCATCAGCGGCCCTGG-----------CTGAATCAAGAAGCCAG-----AGGCCTGGTGCCATTCTAAAATAGCAGCATTGCTATGCTTTCCAACTGAGGGATTACTCCTTG------GTGAGCCAGAGAGCTTTGGAACATCGTTTGGAAGCAA----AACCACATTTTTTTCAAAAAGAATTTTTTTTAAAGGAAATTTTACATGCAGTGAAGTCAAGGCTTAACTCTTGAGAG chr4 - 94230402 18445974 18445973 18446452 75783951 75783950 75784429 479 GTGTTGCAACAAAGTATACTGAGTGCTCATCACAGAGTGACCAGAGACCTG---------GGACAGAGGGTCAGGAAGAACAGATGGGGCTTTACAGATGCAGGTTAGAAGTTCATTTGAGTGGGAGGGGAAATAGTTATATCTGTCTCAACTGAACACAGCAAAATAGGAGAGAGACAGCAAGTTGCAAATGTCTTCAGAATGCCTTGCATCTATAGGATGCTGTTT---------------TATCTGAAG-AGTTGCTTT--TTTGCTCTTCTGAATTTCCAGAAGGCACAGAAAGCATTAATCTGAAACATGAAACCAGGCCCAAGTTCCTAAGCCCCACTAAAATAGCAGTGTTGTTTCATTTTCCAGCTGAGTAATTACTCCTTGGAGCCAGTGAGAAGAAGGGGCTTGGAATGTCACTTGGAAATGACTTCCCCCACACACACCTCCACAA-----TTTTTTAAAG---ACTTTCCATGCAATGAAGTCAGTGCTTAATTCCAAAGAG .....:..xx::xx..::..x..:x:......x...:::.::..-...xx.---------..x..x.........:.x:.........x..::..xx.x................x...xx::.....:::..x.x::..x.:.....x::xx.x...x:.:x:::...:.::.:..----.::x..x....:-xxx.....x....:x.x.:.x.:::..:::x:..---------------.....x...-.....:...--...x.:..xxx...x:x:...x:.x.x::.-----------.....x..x...:....-----..x:.:x:x...x:x............::...:.x:::......:.....x:...........------.....xx::..:.x:......::..::......:::.----xx.....:x:x::..x.x..-----..........---.:...x......:........:x......:..:x:.... 44M1I6M9D117M4I12M1I34M15D9M1D9M2D30M11I17M5I63M6I37M4I20M5D10M3D39M 290/447 64.9% 479/94230402 0.0% 67/447 15.0% 7586808 NA +9410 chr4 + 190214555 26032782 26032781 26033255 474 GTGTTACATAGGCTTACGCTCAGCCTTCATCAGAGAACAATTAG-GACGAGTGTGGGGGAGGCCACAGGGTCAGGGATGACAGATGGGCCTCCACTTAAGCAGGTTAGAAGTTCAGTTGCTCAGGAGGAAGAAGACCCATCTTTGTCTGGGGAGCACAGGGTTGGGTAGAAAGGGGA----AGAATGGAAATA-AGGCAGAAGGCCTCTCTTTTCTGAAATATCCCTTAGGGATAAGTCCCTATATCTTAAGCAGTTGTTTTAGTTTTCCCTGAAGAAGCATCAGCGGCCCTGG-----------CTGAATCAAGAAGCCAG-----AGGCCTGGTGCCATTCTAAAATAGCAGCATTGCTATGCTTTCCAACTGAGGGATTACTCCTTG------GTGAGCCAGAGAGCTTTGGAACATCGTTTGGAAGCAA----AACCACATTTTTTTCAAAAAGAATTTTTTTTAAAGGAAATTTTACATGCAGTGAAGTCAAGGCTTAACT chr4 - 94230402 18442951 18442950 18443421 75786982 75786981 75787452 471 GTGTTGCAACGAAGTATACTGAGTGCTCATCACAGAGTGACCAGAGACCTG---------GGACAGAGGGTCAGGAAGAACAGATGGGGCTTTACAGATGCAGGTTAGAAGTTCATTTGAGTGGGAGGGGAAATAGTTATATCTGTCTCAACTGAACACAGCAAAATAGGAGAGAGACAGCAAGTTGCAAATGTCTTCAGAATGCCTTGCATCTATAAGATGCTGTTT---------------TATCTGAAG-AGTTGCTTT--TTTGCTCTTCTGAATTTCCAGAAGGCACAGAAAGCATTAATCTGAAACATGAAACCAGGCCCAAGTTCCTAAGCCCCACTAAAATAGCAGTGTTGTTTCATTTTCCAGCTGAGTAATTACTCCTTGGAGCCAGTGAGAAAAAAAGGCTTGGAATGTCACTTGGAAATGACTTCCCCCACACACACCTCCACAA-----TTTTTTAAAG---ACTTTCCATGCAATGAAGTCAGTGCTTAATT .....:..xx.:xx..::..x..:x:......x...:::.::..-...xx.---------..x..x.........:.x:.........x..::..xx.x................x...xx::.....:::..x.x::..x.:.....x::xx.x...x:.:x:::...:.::.:..----.::x..x....:-xxx.....x....:x.x.:.x.:.:..:::x:..---------------.....x...-.....:...--...x.:..xxx...x:x:...x:.x.x::.-----------.....x..x...:....-----..x:.:x:x...x:x............::...:.x:::......:.....x:...........------.....xx.:.:..x:......::..::......:::.----xx.....:x:x::..x.x..-----..........---.:...x......:........:x......:. 44M1I6M9D117M4I12M1I34M15D9M1D9M2D30M11I17M5I63M6I37M4I20M5D10M3D31M 288/439 65.6% 471/94230402 0.0% 67/439 15.3% 7589831 NA +10829 chr4 + 190214555 26048654 26048653 26048947 294 AAGGCTGCAGCCCATTTGGAAAAC-----GTTTTAATTTCACTTGCGTGTTTTTTCAATTTGATTATTAAGTGCCGTTTACACATGGACGGGGAAAGCCTGTTTTCATTCGCTGATTCCCCTTCCTCCCT----GGCCTGCGTGCCTCCCTGGTGAGTAATGGGGAGGCTGCTTTTCTGGAACACAAGGGAAAACTTCCAGCAAATTGCAAAAGCATGTTCCTTCCTTGAAAAATCCTTTCACACTTGTTTTTTACTCCGTTTGTAAAGTTCATGAAAAGCCTCCATAAAAGTGCTTTAAAAA chr4 - 94230402 18453283 18453282 18453558 75776845 75776844 75777120 276 AAGGCAATGACCCATTTGAAAAAAAAAAAGTTTGGATTTAACTTCTATTTTTTTT----------ACTTAGTGTAGATACTAAA--GAAGGGAATTGCCTGTTTTTACTAGCTGATTCTCTTTCCTTCCTTCTTGGCTCATGTGTCTCTCTGGTGAGTAATGGGGAGGTTGCTTCTCTGGAACACGAGGGGAAAGTTTCAGTAAATTGCAAAAGCATGTTTGTTACTTG-GAAGTCTTTTGGCAC--ATTTTTGAC--------CAAAGTTCATGGAAA----CCTTAAAAATATTCTGAAGA .....x::::........:....x-----....x:....x....x::.x......----------.:.x....:x.x.xx:.x.--..x...:.xx.........:.:.x........:.:.....:...----...::::...:...:...................:.....:..........:....:...x..:...:..................:x..x....-:..:..:...x:...--:.....x..--------:..........:...----..x.....:.::.:.:..:. 24M5I26M10D19M2D44M4I95M1D15M2D9M8D15M4D20M 202/267 75.7% 276/94230402 0.0% 36/267 13.5% 7595371 NA +3077 chr4 + 190214555 26052070 26052069 26052124 55 CAAGAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGGATTGCTGT chr4 - 94230402 71125485 71125484 71125539 23104864 23104863 23104918 55 CAAGAAATAAAAAATAAAAAAAGAGAGAGAGGAAAAAAAGAACAAGCCTAGCTGT .......x......x.......:.:.:...::.:........x...xx.x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -45073415 -49156987 +7085 chr4 + 190214555 26086717 26086716 26086950 234 CAAACACATGCTCACACATCCAA---TGGGACCCAACGTACTGCATTCCACGCAGATACACACATGAGCTCATGCAAG-----TCCCAGGGTGCTCATCTGGTCCAGATTTGAAGGAAACTATTTAGCTAGATGGAGAAAAACACATCATGTA-CAACTTAATACCAAACAGATTTTATGACATACTGAAACTGCTTTTGATAATCTACTAATATATCAGAAGAG-CTAATCAACTAAAAAAGA chr4 - 94230402 18466479 18466478 18466712 75763691 75763690 75763924 234 CAGACCCTAATTCACATCTCAAGATGTGTGACCAAATGTCGGACATTCCACTCAGAAGTCCAGATGAACTCATCTAAGATAACTCACTATGTTTCCATCTGTTTCAGATTTGAAGCAAACTATTTGGTTGGAAGAAGAAAAATACACTTTGTATCATTTTAATGCTGAACAGATTTAGTGACATATT-----TGCTTATT-TAATCTAC-AGTAT---AGGAGAGTCTAATGAACTGAGTAAGA ..:..x.xx::.....:x..x.:---..x....x..:..xxx:........x....x::x..x....:.....x:...-----..x.x:x..x::......x.:...........x.........:.:.:..x.:.......:...::x....-..x:.....:.::.........x:.......:.-----.....x.x-........-.:...---..:....-.....x....:.:x.... 23M3I52M5I70M1I33M5D8M1D8M1D5M3D7M1I18M 163/224 72.8% 234/94230402 0.0% 20/224 8.9% 7620238 NA +3198 chr4 + 190214555 26095599 26095598 26095666 68 AAAGAAAGAGAAAGAGAGAGAGGGAGGGGGAGAGAGAGAGAGAGAAAAGAAGAAGAGGAAGAAGAAGG chr4 - 94230402 44400476 44400475 44400543 49829860 49829859 49829927 68 AAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGG ...:.x.:..x:x.x.x.x...........:.:......::..:.:.....:..:..:.....:x:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -18304877 -75925525 +3053 chr4 + 190214555 26095608 26095607 26095667 60 GAAAGAGAGAGAGGGAGGGGGAGAGAGAGAGAGAGAAAAGAAGAAGAGGAAGAAGAAGGA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ......:...x:...:.....:.:...:.:.::....:.:.....:.:...:x.x..::. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% -51090469 -43139933 +3018 chr4 + 190214555 26109484 26109483 26109524 41 ATATATATACACACACACATATATATATATACACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x....:.:..............:......x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -19162204 -75068198 +3082 chr4 + 190214555 26142771 26142770 26142806 36 TATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG .:...............................x.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 7160456 NA +3097 chr4 + 190214555 26142771 26142770 26142811 41 TATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAGAGTCT chr4 - 94230402 81629064 81629063 81629104 12601299 12601298 12601339 41 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTT .:........:......................x..x..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -55486293 -38744109 +3127 chr4 + 190214555 26145018 26145017 26145115 98 TCTTCTTCTTCTTTTTTTTTTTTTTTTTGAGACAAAATGAAAATGTAGTAGTTTACATTTTTCTGAGTTTCATTTCATCTTCCTGGTTTCAACAGTTT chr4 - 94230402 22616726 22616725 22616816 71613587 71613586 71613677 91 TTTCCTTATTCTTTTTTTTTTTTTTTCAGGGATAGAAAGAAGGGATAGTATTTTGAA-TTTCCAGAAGTTAGCTTTATTTAC------TAAACAGTTT .:.:...x..................:x.:..:.:..x...::x:.....x...:x.-...:.x..:x..x::..:..:.x.------.x........ 57M1D24M6D10M 64/91 70.3% 91/94230402 0.0% 7/91 7.7% 3528292 NA +3572 chr4 + 190214555 26157077 26157076 26157152 76 AAAAACAAACAAAC--------AAACAAACAAAAACAAACAAACAAACAAAAAAACCCCCAAAACTAAAAACTAAATCCAGCAG chr4 - 94230402 13130810 13130809 13130893 81099510 81099509 81099593 84 AAAGAAAGACAAATTCATCCAAAAACAAAACAAAACAGAAAAACAAACAAAAAACCCCCCAAAACCAAAACTTGACATCTGCAG ...:.x.:.....:--------.......xx......:.x..............x..........:....x:.:.xx:.x.... 14M8I62M 59/76 77.6% 84/94230402 0.0% 8/76 10.5% 13026267 NA +4050 chr4 + 190214555 26162554 26162553 26162665 112 ACATGTATTGATCTATTTAATCTTCACAAGAATCCTAGGAAAGAGGTGGC--ATATTATCCCCATTCTACAGATGAACAAATTGAGACATAGAGAGGTTAAATAACTTGCCCAG chr4 - 94230402 10729150 10729149 10729258 83501145 83501144 83501253 109 ACAGGAATTGATTTAG-----CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG ...x.x......:..x-----.:......x.x:...:x..::x....:::--x...:.x.:.....:.....:..::x...:....:..:.x.x.......:...:........ 16M5D29M2I62M 75/107 70.1% 109/94230402 0.0% 7/107 6.5% 15433404 NA +3347 chr4 + 190214555 26172759 26172758 26172876 118 TAGATAATTACAATGATTCCCATTTTACAGGTGAGAGAACTGAGGTTGAGAGAAGTCATGTTACTCTGCCTAGACTACATAACTTATATGTAGAACTGGGATTCAAATCCAGGTCTGT chr4 - 94230402 10729187 10729186 10729284 83501119 83501118 83501216 98 TAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAG-TAATTTGCCCAGAGT-------------------CTGGGTACAGAATCCAGGTATGT ...:.......x..x.x::..............:..:........:xx.x.x.:..:.x.-..x.:....:...x.-------------------.....xx:x:.........x... 60M1D15M19D23M 72/98 73.5% 98/94230402 0.0% 20/98 20.4% 15443572 NA +3784 chr4 + 190214555 26186248 26186247 26186354 107 TTATTAGCTGTGTGACCTTTAGCATGTTACTTAATCTCTCTATGCCTCAGTTTCCTCATCTGTTAAATTGGGATAACATTGTTACTTAACTCATAGGGTTTTTATGA chr4 - 94230402 11947208 11947207 11947313 82283090 82283089 82283195 106 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA-CAATGCTAACCTTGAAGGAACTTTGTGA .:.:..:............x:.:xx..:.........x:..:..:.:........:...x.:.x....x:xx....:.-::x.:..x.x..::x...:x:...:... 78M1D28M 70/106 66.0% 106/94230402 0.0% 1/106 0.9% 14239040 NA +3017 chr4 + 190214555 26191164 26191163 26191202 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -43246575 -50983827 +3643 chr4 + 190214555 26191180 26191179 26191264 85 AATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGGGAGAGAG chr4 - 94230402 89611983 89611982 89612064 4618339 4618338 4618420 82 AATATATCTATAC---TATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAG .......x....:---......x.x......:x.x..:x..............::.........::.x:x:...:..::.:.x.. 13M3D69M 60/82 73.2% 82/94230402 0.0% 3/82 3.7% -63420803 -30809599 +3634 chr4 + 190214555 26192084 26192083 26192165 82 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTACCTCAGCCTCCCAAGTAGCTGGAACTACAGGCTGCGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG-TGCACCACTGTG ..:..:..:xx:x..:.::..........x...x.xx:x........::..................x.-...:....:::. 69M1D12M 58/81 71.6% 81/94230402 0.0% 1/81 1.2% 7994958 NA +24081 chr4 + 190214555 26206435 26206434 26206849 415 TTTATGTGTAACTTCCTTTGCTGTGGAGGCCAGGCTCTAGGTTAACTTCTGGAAGTATCTTTGGAAAGTAATTCTCAGGCATAACTCCAAGAAAAAGAGACACATGGTGAGGAACTGACATAATTTTTTAACACCACAACCAGCATATTTCTGCAGGCAACAGCAGCCAAAATGGGTTGCCAAGACCAATATTGATCTAGTCCTTCATCCAGTCAACAAATGCCATTGTTTATAAGATATAATTTTTTTTGGTTAAAGTTCAAAGTTAAACTCCAAGGATTTTCAAAACTATAAAAACGAAAGGCTTTC-ATACCCTCAAAAAAAAAAAAAAAAAAATCCTGGCCAGTTTTCCTCCTTCACGGGTTTTCGCAGTCACTACAAGAAATACAGCCAAGAAAACACTTTTTTGGTCTTT chr4 - 94230402 18479702 18479701 18480096 75750307 75750306 75750701 395 TTTTTGTGTAGCTTCCTTTGCAGAGGAGGCCAGCCTCTAGGTTAACTTCTGGAAGTAACTTTGGAAACTAAATTTCAGGCAATGCTCCAAGAAAAAGAGGCACATGTTAAGGAACTGACATAACTTTTTAACACCACAACCAGCATATTTCTTCAGGCACACACAGCCAAAAAGAGTTGCCAAAACCAATATTGATCTAGTCCTTCATCCAATCAACAAATGCCATTGTTTATAAGATATAACTTTTCTTGGTAAAAGTTCAAAGCTAAACGCCAAGGATTTAAAAAACTATTAAAATAAGAGGATTTAGATTTCC----------------AGAAACTCTGGCCTGTTTTCAGCCTCAGTGGGTATTCTAAGCCACTA-GAGAAGTAT--CCAAAAAA--ACCTCCTTGGTTTTT ...x......:..........x.x.........x.......................x.........x...x.:.......xx:...............:......x.:..............:............................x......xxx:.........x.:........:...........................:..............................:....:.....x...........:.....x..........xx........x....::.:...x...x-..x:..----------------.:...::......x......xx...:x::....x...xx..:.....-:....:..:--....:...--..:.::.....:... 309M1I6M16D47M1D9M2D8M2D15M 332/394 84.3% 395/94230402 0.0% 22/394 5.6% 7726733 NA +3469 chr4 + 190214555 26210654 26210653 26210796 143 TCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTC-TTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45185609 45185608 45185743 49044660 49044659 49044794 135 TCTCAGTTTTCTGCTTCATTCTTTCT--------TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTG-CTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...:xx....:.x:...x........--------........-...:.:x.:..:........:..xx:....:....::.:....xx.x-.....:x.:x::.x.......xx.:x:.::.xx.:::..x..::.....:.:. 26M8D8M1I47M1D53M 87/134 64.9% 135/94230402 0.0% 10/134 7.5% -18974955 -75255447 +3786 chr4 + 190214555 26210656 26210655 26210782 127 TTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCC----TTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ...:......:..:...:x.:....x....:::.:.x.x..x.xxx.:...::xxx:..:xx:x...::x:.........:.x:x..:.----.x:.......:......x........x...:...:.:. 89M4I38M 81/127 63.8% 131/94230402 0.0% 4/127 3.1% -14008024 -80222378 +3648 chr4 + 190214555 26210668 26210667 26210818 151 TTCTTTCTTTCTTTCTTTCCTTTCTTT------------CTTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCCTGT chr4 - 94230402 76984173 76984172 76984335 17246068 17246067 17246230 163 TCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCCTTCCCTCCAGCTTCCGCCCTGGCTCGTGTTTTATCTCCTAACATCTCTCACTTTCTTTCTCTTCTGCTGT .::.:..x..:.x......:.:..x:.------------:.x::.:....:.:x:.x...:x:.......:..::.xx.:x:.:..:.....:....:..:xx...:.x::..xx..:x:x..:.x...:::xx:x.:...:x..........:....x.... 27M12I124M 89/151 58.9% 163/94230402 0.0% 12/151 7.9% -50773505 -43456897 +3110 chr4 + 190214555 26210689 26210688 26210770 82 TTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCTTTCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTT chr4 - 94230402 12140666 12140665 12140747 82089656 82089655 82089737 82 TTCATTTCCTCTTTCTGTTCATTTTTCCTTTCCACTCTCCTTTTGTACCACCTGCCTTCTGTCCTATCCTTACTATTTCTCT ...x..:::.......x.:.x.:.......:::x..:.....:.x...:x.:.x......x....x:::.:x:.x.....:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 14070023 NA +3240 chr4 + 190214555 26210726 26210725 26210838 113 TCCTTCTTTACTTCTTTCCTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTTCTCCTGTGTG-TCTGGCTCTTTTATTGG chr4 - 94230402 2978705 2978704 2978818 91251585 91251584 91251698 114 TTCTTTATTATTTATTTCATCTTTTCCCTCTTTC-AGCTTTAGTCCCTTCCCAATTTTTTCCCTTCATCCTCATATTTTTCTCTTTTCTGCTTTGTGCTATGCCTGTTATTTTGG .:...:x...:..x....x.::.....:......-xx....xx.:.:...::xx...:..:.:...x.:..:-.x...:.:........x..x....-.x..x..x..x.x.... 34M1D37M1I24M1I17M 77/112 68.8% 114/94230402 0.0% 3/112 2.7% 23232021 NA +3472 chr4 + 190214555 26214157 26214156 26214290 134 GAGAGAAAAGAGAGAGAG-AGAGAAAAGAAAGAAAGAAAAGGAAGGAAGGAGAGAAAGAAAGCAAAGGA--AGGAGAGAAAGAAAGAGAAAAGGGAGAAAAGAGAGACGAAAGAAAGAAAGAGAAAGGAGGAAGGAA chr4 - 94230402 58242937 58242936 58243071 35987332 35987331 35987466 135 GAGAGATCAGGCAGAATGCAGGGAAAAACAATGAAGGAAAGT--GAAAAGGGAGAAAGCAAACAGCTAATTATAAGGCAATAAAAGAAAATGAGGAGAAAAGGTAAACTAAACAAAGGTAGAATTGTGGAGAAGGAA ......xx..:x...:x.-..:.....:x..x:...:....x--.:..:.:.......x..:..:xx:.--.x:..:x..x:.....:..x::.........:x.:..x...x....:x...:xx:x.::....... 18M1I23M2D25M2I66M 86/132 65.2% 135/94230402 0.0% 5/132 3.8% -32028780 -62201622 +3119 chr4 + 190214555 26214166 26214165 26214243 78 GAGAGAGAGAGAGAAAAGAAAGAAAGAAAAGGAAGGAAGGAGAGAAAGAAAGCAAAGGAAGGAGAGAAAGAAAGAGAA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .:.::.:.:.:......:..:....:.......:..::..:.:.:::.:.xx:..::.:x.:.:.::.x.:....... 78M 47/78 60.3% 78/94230402 0.0% 0/78 0.0% -14258376 -79972026 +4519 chr4 + 190214555 26214239 26214238 26214482 244 GAGAAAAGGGAGAAAAGAGAGACGAAAGAAAGAAAGAGAAAGGAGGAAGGAAAGGAAGGAAGCAAGGAGACAGAGAAGGAGGGAGGGAGGGAAGAGAAAGAAAGAAAAGGAAGAGAAAGGAGGAAGGAAGGAAGGAGAGAGAAAG----------AAGGGGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGA---AAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACA chr4 - 94230402 8437517 8437516 8437768 85792635 85792634 85792886 252 GGGAAACAGCTAAAGACCGCGGCAGAAACATCAAAGAGGA-GGAGGAAGGGAGGGAAGGGATTAACGAGGCAGAGTA-GAGAAATGAATTTGAGAAGAAAACATGAAAAACATGTACAGGAAAAAGGCAGAGAGAAGAAGTGAAACGAGTATTTTAATGACGAAGAGTAAGTTTAGAGAAAGGAAAAAGACAACTCAAGATGAAATGAAATGGTGTGAAAACTAAGAAAAGACATTTAAAG---AAAAAGAGAAACA .:....x:.xx:..:.xx.x.:.::..:x.xx......:.-.........:.:......:.x:..x...:.....x.-...::.x.:.xxx:...::..:.x.x:...::x.x:x.x....::....x..::..:...::x:..:----------..x.:x:::...x:..xxx.....:..::...::.x:.---....x:...x..:.x:.x:x..:..xx..:..:.:.x.x.x....---.:........... 40M1D36M1D67M10I38M3I45M3D13M 144/239 60.3% 252/94230402 0.0% 18/239 7.5% 17776722 NA +3179 chr4 + 190214555 26214329 26214328 26214455 127 GAAGAGAAAGAAAGAAAAGGAAGAGAAAGGAGGAAG----------GAAGGAAGGAGAGAGAAAGAAGGGGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAAGAAAAAGA chr4 - 94230402 85530485 85530484 85530621 8699782 8699781 8699918 137 gaAAAGAGAAAACAATGTGCAGATGAATGCAGGGAGATTGTAGGATGAAGTAGAGAATGAGCAAGATGGGGAGGGGGGCAGGGGGGAAGCCTGCAACGGATTGCTGGGATAATGAAAGAGAAAGGAAACAAAAAAGA ...:...:.:..x:.x:x.x.::x...x.x...:..----------....x.::..:x...x....x........:..x....::..::xxx:x..x.:.xx:xx.:..x..x..:........::..x:....... 36M10I91M 79/127 62.2% 137/94230402 0.0% 10/127 7.9% -59316156 -34914246 +4516 chr4 + 190214555 26214336 26214335 26214487 152 AAGAAAGAAAAGGAAGAGAAAGGAGGAAGGAAGGAAGGAGAGAGAAAGAAGGGGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAAAGAGAAA-GAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACAAGGAG chr4 - 94230402 44053977 44053976 44054129 50176274 50176273 50176426 153 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAG ...::.x.x:x.:.::.x::.....:...:..:........x.::..:.x.......x:..xxxx.....:...:....::x..:..x..:x.x..:::.x.......:x..-.x.....x::.x:x:x..::........:::.:..:x... 112M1I40M 93/152 61.2% 153/94230402 0.0% 1/152 0.7% -17839641 -76390761 +3558 chr4 + 190214555 26214376 26214375 26214440 65 AGAGAAAGAAGGGGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAAAGAGAAAAAGAGAGAGAA chr4 - 94230402 59863355 59863354 59863419 34366984 34366983 34367048 65 AGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAAAACACAAAAAAA ...:...:......:.......:...:..:..::.........x:...:x.....x:x:.:.:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% -33648979 -60581423 +3688 chr4 + 190214555 26214435 26214434 26214535 101 AGAGAAAGAGAAAGAAAAAGAAAGAATGAAAGAGAAGAAAGAGAAACAAGGAGGGAAGGAGG--GAGGGAGGGAAGGAGGAAGGGAGGGAGGGAAGGAGGAAG chr4 - 94230402 40465768 40465767 40465868 53764535 53764534 53764635 101 AGAGTCTGGAGAAGGGATGACAAGAATGA--GAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG ....xxx.:::...::.x::x........--..:...:x......:.....:.::.x..:x.--...........:......:....:.:..:..:::x:... 29M2D31M2I39M 67/99 67.7% 101/94230402 0.0% 4/99 4.0% -14251333 -79979069 +3029 chr4 + 190214555 26214513 26214512 26214597 85 AAGGGAGGGAGGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGAAAAGAGAGAGAAAAGAGAAAAAGAAAGAAAGGAAGGAAGGGAG chr4 - 94230402 7232587 7232586 7232671 86997732 86997731 86997816 85 AAAGGAATGCAGATTGGGGGAGGCAATAGAGGAAGGGGGAGAAAGGAGAGAGAAGGGAAAAAGGGTCGGTACTAAAACAAGGGAG ..:...:x.x:.:xx..:...:.x:.x:....:....:.:....:.........::..:...::.xx:.x.xx:..:x....... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 18981926 NA +3930 chr4 + 190214555 26214526 26214525 26214669 144 AAGGAGGAAGGGAGGGAGGGAGGGAGGGAAAAGAGAG--------------------AGAAAAGAGAAAAAGAAAGAAAGGAAGGAAGGGAGGAAACAGAGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAA---GGAAGGAAGAAA chr4 - 94230402 21758892 21758891 21759057 72471346 72471345 72471511 166 AAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATG-ATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAA ......xx..::..........x:......:....:.--------------------.:.x...x:x....:x.x.x..x.-.x:..::..x.x.:.x:...:.:..x::..........:...:....x...x..:...xxx...::....---.x...::.:... 37M20I24M1D70M3I12M 97/143 67.8% 166/94230402 0.0% 24/143 16.8% 4455634 NA +3705 chr4 + 190214555 26214542 26214541 26214685 144 AGGGAGGGAGGGAAAAGAGAGAGAAAAGAGAAAAAGAAAGAAA-------GGAAGGAAGGGAGGAAACAGAGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAAGGAAGAAA-------CAAGGGAGGGAGGAGA chr4 - 94230402 29503820 29503819 29503974 64726429 64726428 64726583 155 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAG---AGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGA .::......:..........:....:x......:::...:...-------::.......---:....::..:x:x:.....x..x:.:x.:.:..:x.xxx...:xx.x:..:..x...:x..:...xx.::...-------...:...x.:..:... 43M7I9M3D73M7I16M 91/141 64.5% 155/94230402 0.0% 17/141 12.1% -3289278 -90941124 +3049 chr4 + 190214555 26214578 26214577 26214661 84 AAAGAAAGGAAGGAAGGGAGGAAACAGAGAGAGAATGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAA chr4 - 94230402 79401160 79401159 79401243 14829160 14829159 14829243 84 AAATAAATAAAGTAGAAGAGGAACTGGAAGGAGTAAAAAGGAAAAAAAAAAAAAAAAAGTACCACACAGACAGAGAAGAAAGAA ...x...x:...x.:::......x::..::...x.x:..::.:......:.:...:..:x.xx.x.x...x......:..:... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -53186582 -41043820 +3271 chr4 + 190214555 26214613 26214612 26214676 64 TGAAAAAGAAAAAAGAGAAAGAAAAAGAAAAAAGAAAGAGAAAAAGGAA---GGAAGAAACAAGGGA chr4 - 94230402 42895010 42895009 42895076 51335327 51335326 51335393 67 TGAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAA .....:..:...:.::....:............x.......:..x.::.---.x:......x...:. 49M3I15M 49/64 76.6% 67/94230402 0.0% 3/64 4.7% -16680397 -77550005 +3331 chr4 + 190214555 26214749 26214748 26214829 81 AGAGAAAAAGAGAGAAAAAAGAGAAAGAAAGAAAGAAAAAGAGAAGGAAGGAAGGGAAAAGAGAGAGAGAGAAAAGAGAAA chr4 - 94230402 7739259 7739258 7739339 86491064 86491063 86491144 81 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAA ....::...:.x...:::::.:.::.:...:.......:...:..x.x....:.....xxxx..:.:.:.:....:.:... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 18475490 NA +3767 chr4 + 190214555 26214774 26214773 26214969 196 AGAAAGAAAGAAAAAGAGAAGGAAGGAAGGGAAAA-GAGAGAGAGAGAAAAGAGAAAGAAAGGAAGGAAGGGAGGGAGGGAGAGAGGAAAGAGAAAATGAAAAAGAAAAAGAGAGAGAAAAAAGAGA----AAAAGAAAGAAAA---AAGAGAAAAAAG------GAAGGAAGGAGGGAGGGAGG--------AAGGACGGAAGGAAGGAGGGAGGGA chr4 - 94230402 4547796 4547795 4548013 89682390 89682389 89682607 218 AGAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA ...:..:x:.:.:x...:.x.xx..:x.x:.....-......x...:x.........x.::.xxxx.....:.:.:.:.::..:....xxx::..:xx....x.:..:...xx.....:.x...::.----....x.:...x..---..x....xx...------...:..::.:.x..:x:..:--------..:..x::..::...x..x:..... 35M1I91M4I13M3I12M6I20M8I25M 123/196 62.8% 218/94230402 0.0% 22/196 11.2% 21666978 NA +3238 chr4 + 190214555 26214914 26214913 26215021 108 AGAGAAAAAAGGAAGGAAGGAGGGAGGGAGGAAGGACGGAAGGAAGGAGGGAGGGAG------GGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGAGAAAGA chr4 - 94230402 79546172 79546171 79546281 14684122 14684121 14684231 110 AGAGAGCACAGG--GGAGGGACAGCGTAAGGAAGGATACAGAGATGGAGAGGGGGGGCTTGTTGGGGAGAGCAAGTGAGAAACGGAGGAAG--AAGGGAGGAATCAGAAAAAGA .....:x.x...--...:...x:.x.x:........::x.::..x....:.:...:.------..:.:..:x:.:x...::.x.....:..--....:.....xx...:..... 12M2D43M6I28M2D21M 71/104 68.3% 110/94230402 0.0% 10/104 9.6% -53331258 -40899144 +4128 chr4 + 190214555 26214923 26214922 26215094 172 AGGAAGGAAGGAGGGAGGGAGGAAGGACGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGAGAAAGAAAGAAAGAAAAGAAAGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAAAGACAGAAA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGAGAAAGAAAAGAA------------------------GGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .:...x.:.....::..::.:...------------------------....:x...:..:x:......x:..xxxx....:...:...:...x...:.x::.x.x...::.x...::..:x:.x.x..:..x.:.x.:.x:..:..::...:.....x.:x:......... 24M24D124M 93/148 62.8% 148/94230402 0.0% 24/148 16.2% -17839066 -76391336 +3359 chr4 + 190214555 26214957 26214956 26215134 178 AAGGAGGGAGGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGAGAAAGAAAGAAAGAAAAGAAAGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAAAGACAGAAAG---AGAAAGAAA---GAAAAAGAAAGAA---------AGGAAAGAGAAACAAGG chr4 - 94230402 21758892 21758891 21759084 72471319 72471318 72471511 193 AAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAACGTTTCAGTGAAAAGTAATAGGG ......xx..::.........:x:.:...:.:::..:.:xxxx:.x.:x.:.x.x.x:.:x...x.x:...:x.x:x..x..x::.::..x.x.:xx:...:.:...::..:........:::...:.x.:...::..:---....::...---.x..:.....:..---------..x:..:..x..:.:.. 139M3I9M3I13M9I17M 104/178 58.4% 193/94230402 0.0% 15/178 8.4% 4456065 NA +3317 chr4 + 190214555 26214975 26214974 26215066 92 GGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGAGAAAGAAAGAAAGAAAAGAAAGAGGGAGGGAGGGAAGAGAGAGAGAAAGAA chr4 - 94230402 36623092 36623091 36623183 57607220 57607219 57607311 92 GGGAGAGTGGGATGAGTGCAGGTGTGAGGGCAGGAAGAAGATGAAGGAAGAAATATCAGAAAGAAGAAATGAGAGGAATGAAAGAGTGTGAA ..:..::x..::x...x.x:..x.x..:..x......:...x:...:......x.xx.......:.:.:x...:.:.:x..:....x:x... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% -10408117 -83822285 +4154 chr4 + 190214555 26214984 26214983 26215115 132 GAGGGAGGGAGGGAGGGAAGGAAG---------GAAGGAGAGAAAGAAAGAAAGAAAAGAAAGA--GGGAGGGAGGGAAGAGAGAGAGAA--AGAAAGAGAAAAAGAGAGAAAAAAGACAGAAAGAGAAAGAAAGAAAAAGAAAG chr4 - 94230402 72821452 72821451 72821596 21408807 21408806 21408951 145 GGGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAG .:..:.:..x::..:.:..:.x..---------....xx:..:::...................--:.xxx.x.....:...:.:.:...--..xxx..:.:...:...x....x...x....xx..x..:..:.....x:.... 24M9I31M2I24M2I53M 91/132 68.9% 145/94230402 0.0% 13/132 9.8% -46606468 -47623934 +3331 chr4 + 190214555 26214987 26214986 26215177 191 GGAGGGAGGGAGGGAAGGAAGGAAGGAGAGAAAGAAAGAAAGAAAAGAAAGAGGGAGGGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAAAGACAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGGAAAGAGAAACAAGGAAGG-------AAGGATGGAGGGAGGGAGAGAAGGAGGATAGGGAAGGAG chr4 - 94230402 33149003 33149002 33149196 61081207 61081206 61081400 194 GAAGTGAGGGCTAGAAGGGAGGAAGGA---ACTGCTGGAAATGAAAAATAAATTAGTGCAGAATAGAGCAGGTGATGGGAA-AGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAACAGAAATAAGATTAGGCAAAGGAAATCTGAGGGGAGAAGAAGGCATAAAAAGAGAATTAGAAAAGAG .:..x.....xx:.....:........---.xx.xx:....x:...:.x.:.xx::x.x..::x....x::.x..x:.:..-..x.::xx..xxx.:..:..x.x.:..:x....x.:x..:..:......x:....x.::.x:.:.x..:.-------:...:x:..:.:...x.x.:..:...:..x:.:..:... 27M3D51M1D70M7I39M 110/187 58.8% 194/94230402 0.0% 11/187 5.9% -6934016 -87296386 +3323 chr4 + 190214555 26215040 26215039 26215118 79 GGAGGGAGGGAAGAGAGAGAGAAAGAAAGAGAAAAAGAGAGAAAAAAGACAGAAAGAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 27736736 27736735 27736814 66493589 66493588 66493667 79 GGGGGAAGGGAAGGGAGGATGGAAGAAAAAAAAAAATACAATACAAAAACCGAAAAATTAAAAACGAAAAATAGCAAAA ..:..:.......:...::x.:......:.:.....x.x.:x.x...:..x....:.xx..:..x......x.:x:... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -1521696 -92708706 +4463 chr4 + 190214555 26215139 26215138 26215308 170 AAGGATGGAGGGAGGGAGAGAAGGAGGATAGGGAAGGAGGAAGGAAGGAAGGAAGGAAAAAGAGAGAGAAAGAAAGAGAAA------AAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGAAAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAGAA chr4 - 94230402 90814938 90814937 90815103 3415300 3415299 3415465 166 AAGGGTGGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAG----------AGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGACAGCTCCAGAAAGAA ....:...:.:...:......:.x:...::..xx.x.:.::..----------..:x..........x..........:..------....::...x..::.xx:.:x.:...x..:.:.:::.x....xx:.:::x:::....::.x..::..:......x.:xxxx...:.... 43M10D28M6I89M 100/160 62.5% 166/94230402 0.0% 16/160 10.0% -64599799 -29630603 +3674 chr4 + 190214555 26215209 26215208 26215369 161 AGAAAGAGAAAAAGAGAGAAAAGAGAGAAAGAAAGAAAGTAAGAAAGAAAGGAAGGGAGGGAGGA----AAAAGAGAGAGAAAGAAAGAGAAAAAGAGAGAG------AAAAGAGAAAGAAAGAAA----------------GAAAAAGAGAGAGAGAAAGA--------AAGAAAAAAAGAAGGAAGGAAGGAA chr4 - 94230402 4547819 4547818 4548013 89682390 89682389 89682584 195 AGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA ...x.x......x......x.::.x.:.:.....x.::.:xxx:...:..:...:.::.::....----...:x...:.x...::...xx.:.:...x.::.------....x...:.x...xx..----------------....:....:.x..:x....--------..::.:....:..:.x..x....:. 65M4I33M6I18M16I20M8I25M 106/161 65.8% 195/94230402 0.0% 34/161 21.1% 21667390 NA +3160 chr4 + 190214555 26215270 26215269 26215370 101 AGGAAAAAGAGAG-----AGAAAGAAAGAGAAAAAGAGAGAGAAAAG---------------AGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGAAGGAAG chr4 - 94230402 22228858 22228857 22228978 72001425 72001424 72001545 121 AGGAAAAAAAAAATCTCACAAAAGCAAATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGGCAG ........:.:.:-----x:....x..:x....::x...x:.::.:.---------------.x.:.:::.....:.....:...........:...:.x.:::..x..:.:......x.. 13M5I29M15I59M 68/101 67.3% 121/94230402 0.0% 20/101 19.8% 3986412 NA +3034 chr4 + 190214555 26215312 26215311 26215364 53 AGAAAGAAAGAAAGAAAAAGAGAGAGAGAAAGAAAGAAAAAAAGAAGGAAGGA chr4 - 94230402 77178713 77178712 77178765 17051638 17051637 17051690 53 AGTAGGAAAAAAAAAAAAAGAGGGAGAGATAGAGAGACAAAAAGCTGAAGGGA ..x.:....:...:........:......x...:...x......xx.:.:... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -50963401 -43267001 +10372 chr4 + 190214555 26239160 26239159 26239395 236 ATAGAAATTTATTTTTATTACTGAGCTCCTATTTCTGCTTTTGCCATCACCACAGATCAGTTCGGGTTTTGTATCCCAGCCAAGTGCTTTTCATATTTTCCAGATCACTCAAAAGTCTGTATCCGCTGCCTGGAGCAGGTTTAAGGAACAATCTGAGATTTCTTTCTGAATAAGCAGTTATTTGTACTTTGTTTTGCTTTTCTTGGTTACTGAAGAGAAACAGTGACATAAAGAAA chr4 - 94230402 18492384 18492383 18492615 75737788 75737787 75738019 232 ATAGGAATTTGCCTGTATTATATAGCTTTGACTTCTGTTTTTGCCATTATCACATATCAGCTCTGTTTTTGTTCCCTAGCCAAGTTCTTCTCATATTTTCCAGATCATTCAAGTGCCTGCATCCAGTGCCCCAGCAAGGTTTAATGAACAAGTCAGTATTACTCTATAAGCAAGCAATTATTTTTGATTCATCT--CTTTTCAGGTCTGC--AAGGGAAACAGTGAATTAAAGGAA ....:.....:::.x.....:xx....::x.:.....:.........:.:....x.....:..x.x......x:..:........x...:.................:....:x.:...:....:x....:x::xx........x......x::::x...x..:.x.:.::.....:......x.:x..::.:.--......xx.x:.:.--...:..........xx.....:.. 194M2D14M2D24M 166/232 71.6% 232/94230402 0.0% 4/232 1.7% 7746776 NA +3339 chr4 + 190214555 26244127 26244126 26244196 70 AAATGTATATATATATGTGTACACATATATGTATATATATATGTATACACATATATGTATACATATATGT chr4 - 94230402 35554959 35554958 35555028 58675375 58675374 58675444 70 AAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGT ....:...x.:x:.:.....:.......:x..:..........:.....x.x..:....x.x..x:.x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -9310832 -84919570 +3326 chr4 + 190214555 26244316 26244315 26244375 60 TATATGTATACACATATGTGTACACATATGTGTGTATATATATGTATGCACATATGTGTA chr4 - 94230402 35554958 35554957 35555017 58675386 58675385 58675445 60 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA ..x..:...x::x:.:.....:........x.............:..:..x.x....... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -9310642 -84919760 +3536 chr4 + 190214555 26244431 26244430 26244555 125 GTATACATATGTGTGTATACATATATGTGTGTA---TATATGTATACATATGTGTGTATACATATATGTGTGTATATATGTATACATATATGTGTATGCATATATACTGCTAAATGTAAATGGTTTCT chr4 - 94230402 35554922 35554921 35555047 58675356 58675355 58675481 126 GTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTT--CAAATACAAACAGTTTTT ....::x.x.x...x.x....xx.x.:x..:..---..x..:...x::x:.......::......:x....:........:.....x.x.......x:x..x:.x::.--:....::...::....:. 33M3I72M2D18M 81/123 65.9% 126/94230402 0.0% 5/123 4.1% -9310491 -84919911 +3190 chr4 + 190214555 26253400 26253399 26253469 70 CTTCCGGGTTCACGCCATTCTCCTAGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ....:.......x.:xx...x.xx:.........::.:.........:......--..:x.:.....::. 54M2D14M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 8056261 NA +7661 chr4 + 190214555 26268331 26268330 26268527 197 ATTGGAAATTGGGCTGTTTTTGCTTCATTTCTGGGGCCTGAGTCCTTCTCTCCAATACCAGGATGCCCTTAGGGAAGATACAGGGGAAATGATGTCATTCTCTT--TGGTCTCTTTTCAGGCTTTGGGCTTTTTCTTCAGGCCCAACCCTTAATGAACCTGCTTTCTAATTAGCCAGCCAGGAGTACAGTGAAATGAAA chr4 - 94230402 18496741 18496740 18496935 75733468 75733467 75733662 195 ACTAAAAGCTGGGCTGTTTTCATTTCATTTTTTCAGACTGACTCATATTCTCCAATCCCG---TGTCCTCAGGGAAGATACAAGG-AAATGATGTAATTCTTTTCTTTTTTTTTTTTCATGCTTTGGACTTTTTCTTTTGGCATCAGCTGCACTGGGCCTGTTTTCTAATTAATCTGTATAGACTACGCTACAGTAAAA .:.::..::...........:::.......:.xx:.x....x..x.x:........x..:---..:...:............:..-.........x.....:..--.xx.:.:......x.......:.........:x...x:x.x.:x:.x..::....:..........::.x.:xx:..x...:x.:x.:.:... 60M3D22M1D18M2I93M 136/193 70.5% 195/94230402 0.0% 6/193 3.1% 7771590 NA +3013 chr4 + 190214555 26270292 26270291 26270364 73 GGAAGGGAAGGGGAGGGGAGGAGGGGAGGGGAGGAGAGGGGAGGGGAGGGAGGGAGAGAGCAAGAGAAAGAAA chr4 - 94230402 33386346 33386345 33386418 60843985 60843984 60844057 73 GGAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAGAAAGGGA ...::.x..:....x:.....::.::.:x...::.:..x.::..:.x::....:.::..:..........::. 73M 45/73 61.6% 73/94230402 0.0% 0/73 0.0% -7116054 -87114348 +3001 chr4 + 190214555 26270317 26270316 26270408 92 GAGGGGAGGAGAGGGGAGGGGAGGGAGGGAGAGAGCAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 16205129 16205128 16205220 78025183 78025182 78025274 92 GAGGGTGGAGGTTGTGTGTGCTGGGAGGGGGAGAGGAAGAGAAATGCAGTAAAGAAAAAAAAAAAAAAGAACTCTCTAAAAAGAGGAGAAAA .....x:.::.xx.x.x.x.xx.......:.....x........x:x..x..::..:...:...:......xxxxxx...:.:..:.::... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 10065188 NA +3127 chr4 + 190214555 26270343 26270342 26270426 84 GGGAGAGAGCAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .:..:.x...x.:x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% -10587950 -83642452 +3157 chr4 + 190214555 26270355 26270354 26270438 84 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -10587938 -83642464 +3057 chr4 + 190214555 26270360 26270359 26270442 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::......:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -10587934 -83642468 +3057 chr4 + 190214555 26270368 26270367 26270450 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x......::..:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -10587926 -83642476 +3662 chr4 + 190214555 26271102 26271101 26271188 87 CACTATGTTTCCCAGGCTGGTCTCAAACTCCCAGGCTCAAGCTCTCCTCCTGGCCCAGCCTCCCAAGTAGCTGGAACTACAGATGCA chr4 - 94230402 18197117 18197116 18197198 76033205 76033204 76033286 82 CATCATGTTCTACAG-----CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..::.....::x...-----:.:x..:..:.::..:.....:x..:.x.xx...:......::..................x:.... 15M5D67M 58/82 70.7% 82/94230402 0.0% 5/82 6.1% 8073985 NA +3036 chr4 + 190214555 26280385 26280384 26280433 49 CACTTCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGCCCCAT chr4 - 94230402 76845947 76845946 76845995 17384408 17384407 17384456 49 CGTTTCTTCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAAT .::...x...xx................:.:............x..x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -50565562 -43664840 +3121 chr4 + 190214555 26282103 26282102 26282158 56 TAATTGCCTTCATTCGTAATCCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTGC chr4 - 94230402 47552677 47552676 47552732 46677671 46677670 46677726 56 TAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTACTGC ..:..x:....xx:x..:x.x..............................x:... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -21270574 -72959828 +3104 chr4 + 190214555 26282121 26282120 26282167 47 ATCCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTGCTAATGTAAA chr4 - 94230402 45399590 45399589 45399636 48830767 48830766 48830813 47 ATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTATGCAAA ...:............................::..x:xx...:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -19117469 -75112933 +3178 chr4 + 190214555 26282122 26282121 26282188 67 TCCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTG-------------CTAATGTAAATCTTGCCTGTGAATCATCTAA chr4 - 94230402 18929913 18929912 18929992 75300411 75300410 75300490 80 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAAGTAGCTGCTGCTTGTAAATTCTGTAA .:..............:...................-------------.x:.x...:x.x:...:...:...:x.x... 36M13I31M 53/67 79.1% 80/94230402 0.0% 13/67 19.4% 7352209 NA +3192 chr4 + 190214555 26284544 26284543 26284626 83 CTGCAACCTCCACCTCCTGGATTCAAGCGATTCTCCTACCTCAGTCTCTCGAGTAGCTGGGATCACAGGCATGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:....:......:.x...x.xx:x.....:..:..:.........:.::...--.:..::....:::. 67M2D14M 54/81 66.7% 81/94230402 0.0% 2/81 2.5% 8087418 NA +3243 chr4 + 190214555 26287564 26287563 26287642 79 GAAAGGAAAGGAAAGGACAGGAGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGC chr4 - 94230402 47816940 47816939 47817018 46413385 46413384 46413463 79 GAGGGGGCAGCATGGGACAGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAAAGC ..::..:x..x.x:......:::....:.:...x..x.:.....:x:.x....:....:....:.:.:.::::.::... 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% -21529376 -72701026 +3465 chr4 + 190214555 26287643 26287642 26287734 92 AGAGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAAGGAGGGAAGAAAAGAAAGAGAAAGAAAGAAGAAAACGAGAAAG chr4 - 94230402 67772342 67772341 67772433 26457970 26457969 26458061 92 AGAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAAAAAGAATGGGAAACAG ...:...:.x::.x:.:...:....x..:..:x.:..x.:.::.:x....x...:.:......:..xx...:....:.....x:x..:.x.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% -41484699 -52745703 +3049 chr4 + 190214555 26287645 26287644 26287752 108 AGAAGAGAAGAAAAGAGAAGAAAAGAAAAGAAAGGAAAGGAAGGAAAGGAGGGAAGAAAAGAAAGAGAAAGAAAGAAGAAAACGAGAAAGGGAGGGAGGAAGGCAGGA chr4 - 94230402 61334703 61334702 61334810 32895593 32895592 32895700 108 AAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGATTGGA .::......:x.....:x:.x.:.....:.x:....:.x.xx.:x.:::xx:.x......x.x......x..x..:.:....:::...::::::....:x..::x... 108M 63/108 58.3% 108/94230402 0.0% 0/108 0.0% -35047058 -59183344 +5540 chr4 + 190214555 26287682 26287681 26287830 149 AGGAAGGAAAGGAGGGAAGAAAAGAAAGAGAAAGAAAGAAGAAAACGAGAAAGGGAGGGAGGAAGGCAGGAAGGCAGGACAGAAGAACGCAGGCAGGCAGGCAAGATGGAAGGAAGGAAGGGAGGGAGGGAGGGAAAGAGAAAGAAGGA chr4 - 94230402 12186181 12186180 12186315 82044088 82044087 82044222 135 AGGAAACAAAG-AGGTAAGAAAATAAAGA--aaggaagaggagaaatagaaagagaaggagaaag--aaaaagggaggaagGTAAA---------GGGAGGCAAAACAGAAGAGAAGAAATGCAGGAGGAAGGGAAAGGGGAAGAAAGA .....:x....-...x.......x.....--...:....:..:..xx......:..:....:...--.::....x....x:.x.:.---------..x......:.::....::.:...:x.x:.....:........:.:.....:.. 11M1D17M2D34M2D19M9D54M 101/135 74.8% 135/94230402 0.0% 14/135 10.4% 14101501 NA +8745 chr4 + 190214555 26296790 26296789 26296998 209 GCAACATCCATTTAAAATAGCAATTGCGCTTTCAAGGTCCTGGTATTATTCAGGCAAAGACTCAAAATGATCACTTTC-TTGGCATA--CATAGAAGCCCAAATGTTAAGATGTGTTCTGTGGGCAACTCTCTGCTTGTTTTCTTTCCTAGACAAGTGGTTAACCCGTGTTGCATATCCTGTGTTTATAGAATTCCAGAAAGGTCGTGTCAT chr4 - 94230402 18510758 18510757 18510964 75719439 75719438 75719645 207 GTATCTTCCATTTCGAGCAGCAGAGGCACTTCTGACATCTAG---TTGTCCAGCCAGA-AGTTAAGGCAATAACTTTAGCTGGCATATGCACAGAAGCTCAGATGT-AAGATATGCTCTGTGGGCAACTGCCTGTTTATTTTCTTTCCTAGACACGCGGTTAAACCACATTGTACATCCTGTGCTTATAAAATTCCAGAGGAGTTATATCAT .:.x.x.......x:.::....:xx..:...:::.x:..:x.---..:.:...x..:.-.x.:..::::..x.....x-:.......--..:......:..:....-.....:..:.............x:...:..:................x.:......x..:::...:.:........:.....:.........:::..::.:.... 42M3D13M1D19M1I8M2I17M1D105M 148/204 72.5% 207/94230402 0.0% 8/204 3.9% 7786032 NA +3309 chr4 + 190214555 26297329 26297328 26297380 52 TCACTTTGTGTGTGTGTGTGTGTGTGTACGAGAGAAAGAGAGAGAGAGAGAG chr4 - 94230402 18982303 18982302 18982354 75248049 75248048 75248100 52 tctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..x..:.x.x.x...............::......:............::.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 7315026 NA +3037 chr4 + 190214555 26301583 26301582 26301627 45 CTCTGTCTCAAAAAAAAAAAAAGAAAAAAATTTAAATTTTTTTTA chr4 - 94230402 52964882 52964881 52964926 41265477 41265476 41265521 45 CCCTGCCTCAAAAAAAAAAAAAGAAAAAAAAGTAAACTTTCTGTA .:...:........................xx....:...:.x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -26663299 -67567103 +3051 chr4 + 190214555 26305734 26305733 26305791 58 TAATAATTTTTTAGTGGAGTTCTTAGAATTTTCTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 90710010 90710009 90710067 3520336 3520335 3520393 58 TAGTGATGTTTATGTTAGACTTTTAGGGTTTTCCTTTCTTTTTTTTTTTTGTTTTTTT ..:.:..x...xx..x::::.:....::.....:................x....... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -64404276 -29826126 +4367 chr4 + 190214555 26305855 26305854 26305935 81 CTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCACCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGTGCCACTG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG ..:..:..:xx:x..:.............x.....xx.x........::...........:......--....::...... 67M2D12M 62/79 78.5% 79/94230402 0.0% 2/79 2.5% 8108729 NA +3545 chr4 + 190214555 26311112 26311111 26311220 109 AAACAGTAAT--ACTTTGAATTCTGACGATCCTATGAATTAGA-AGCTACAATC---TCCATTTTATAGGTGAAGAAACTGAGGCACTGACAAGTTAAAAAACTTGTCTAAGATC chr4 - 94230402 10729148 10729147 10729262 83501141 83501140 83501255 115 AAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ......x...--.:..x.xx.:x::.::x:...:...:x...:-.::...x...---.........:.....:::............xx...:.....:x..:...:.:.:::.. 10M2I31M1I10M3I58M 74/109 67.9% 115/94230402 0.0% 6/109 5.5% 15581964 NA +3017 chr4 + 190214555 26315151 26315150 26315189 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -43122588 -51107814 +3197 chr4 + 190214555 26316312 26316311 26316362 51 TATATACATATTCATATATATACATTCATATATACATATTCATATATACAT chr4 - 94230402 27588139 27588138 27588189 66642214 66642213 66642264 51 TATGTGCATATTCATATATATACATTGGTGTATGAATATTAGTATATACGT ...:.:....................x:.:...:x.....x:.......:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -1271827 -92958575 +3069 chr4 + 190214555 26316703 26316702 26316759 57 ATATATATACACACACACACATATCCGGCTAGTGGTGTTTTTGTTGTTTTTTTCCTG chr4 - 94230402 9342495 9342494 9342551 84887852 84887851 84887908 57 ATATACATACACACACACACACATAAGCCAAGCAATGTTTATAGTGTTTTCTTTCTG .....:...............:..xx.x.x..:::.....x.:x......:..:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 16974208 NA +6146 chr4 + 190214555 26320968 26320967 26321152 185 CCAGGGAAGGCGTCGGGGGGAATCTCGCGAGGGTTGGAGTTTTGGCGAGAGTTTGTGGAAGATGGCGCCTGTTGTGACAGGGTAAGTCTGAGGGAATCGGAGCGCCGGGAACCGGGAAAGTTGCGGGCGTCTGGCAGCTCACGGCGGGCAGCGGGTTCGGGGGCCGC--GGCGCGCTTGGCGTTCGG chr4 - 94230402 18518577 18518576 18518733 75711670 75711669 75711826 157 CCAGGTGCGGGGAGGGGGGCGCTCTCGAGAGAGTAGGAGTTTTAGCGAGAGTTTGTGGAAGATGGCGCCTGTAGTGACAGGTTAAGT------GTTTCGGTGTTCGCGGAGCCGCG--------------CCGGGAGCCCTCGGC----------TTCGGGGGCCGCCGGGCGTGCCTACTGCCCGG .....x:x..x.xx.....x:x.....x...:..x........:............................x........x.....------.xx....x.:x.xx...:...x.--------------.:..x...:.x....----------............--....:..:.:x:.::... 87M6D23M14D15M10D12M2I18M 120/155 77.4% 157/94230402 0.0% 32/155 20.6% 7802391 NA +3380 chr4 + 190214555 26338076 26338075 26338185 110 GGCTTTGTGTTTTTTTGTTGTTTTTTTTTCATCTTCCTCACCCTAACATTATGGAAACATTCTTATGTGTATTTTTCTTTCTTTTTTTTTTTTTTTTTTGAGATGGAGTG chr4 - 94230402 38540 38539 38648 94191755 94191754 94191863 109 GGCTTTGC-TTCTCTTGTTTTTGTTTTCTCCCCTCCTCCAAAGCAGCATTGTGCTTTGTTTCCAAAGTCTTTTTAGTTTTCCTTTTTTTTTTTTTTTTTCCAAAGGAGTG .......:-..:.:.....x..x....:..x:..:.::..xxx:.:....:..xxxxxx...:x.x..x.x...xx:....:.................xx:.x...... 8M1D101M 73/109 67.0% 109/94230402 0.0% 1/109 0.9% 26299536 NA +3082 chr4 + 190214555 26358581 26358580 26358632 52 CCTGGCAGCATAGCAAGACCCCATCTCTGCAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 36313569 36313568 36313620 57916783 57916782 57916834 52 CTTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAA .:...........x....x.x:x...x.x:..........:........... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -9954988 -84275414 +3141 chr4 + 190214555 26364579 26364578 26364638 60 TCCTGTTCTATTTGGAAGACTTTTTTTTTTTTTTCTTTTTCATTTTCTTTTTTTTTTTTT chr4 - 94230402 63973619 63973618 63973678 30256725 30256724 30256784 60 TTTTGATTTGTTTAGAAGATTTTTTTTTTTAGTTTTTTTTCATCTTATTTTTGTCATTTT .::..x.:.:...:.....:..........xx..:........:..x.....x.:x.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -37609040 -56621362 +3826 chr4 + 190214555 26384922 26384921 26385009 88 CTCCCCTCTCTCTTCCCCTCTCCCCTCCCCTCTCCCCTCCCCTCTCCCCTCCCCTCTCTCCTCCCCTCTCCCCTCTCCTCCCCTCCCC chr4 - 94230402 23891361 23891360 23891448 70338955 70338954 70339042 88 CCTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCC .::...xx.:x...:.x........x....x.:x...:....x.:....::.::....::...x::...::.:.:.::......:... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 2493561 NA +3271 chr4 + 190214555 26384969 26384968 26385023 55 CCTCCCCTCTCTCCTCCCCTCTCCCCTCTCCTCCCCTCCCC-CCTTTCCTTTCCTC chr4 - 94230402 70202207 70202206 70202262 24028141 24028140 24028196 56 CTTCTTCTCTCTTCTCTCTTCTCCCCCCTCCCCCCCTTCCCAATTTTCCTTTTCTC .:..::......:...:.:.......:....:.....:...-x:........:... 41M1I14M 43/55 78.2% 56/94230402 0.0% 1/55 1.8% -43817238 -50413164 +4912 chr4 + 190214555 26386338 26386337 26386422 85 TTTTTTTTTTTCCAGGAAATTTGGTGAGCGGCCTCCACCTAAACGACTTACTAGGTGAGTATTATATTAGTCAGCTTTTTACACA chr4 - 94230402 18552526 18552525 18552610 75677793 75677792 75677877 85 TTCTTCTTTTTTCAGGAAATTTGGAGAGCGACCTCAACCGAAACGGCTCACCAGGTAAGCATTAAAGCAGTTCGTTTTTTGAACA ..:..:.....:............x.....:....x...x.....:..:..:....:..:....x.x:...:x.:.....:x... 85M 65/85 76.5% 85/94230402 0.0% 0/85 0.0% 7833812 NA +8355 chr4 + 190214555 26406160 26406159 26406284 125 TGTATTTGTTTTTAGGGAAGCTATGCGAAATTATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCATGCAAAAGTTGCACAGAAGTCATATGGAAATGAAAAAAGGTAAGATTATTTTT chr4 - 94230402 18556345 18556344 18556469 75673934 75673933 75674058 125 TGTCTTAATTTTTAGGGAAGCAATGCGGAATTACCTTAAGGAGCGAGGCGATCAAACAGTACTAATACTCCATGCAAAAGTTGCTCAGAAATCATATGGAAATGAAAAAAGGTAAGTCTCTCTCT ...x..x:.............x.....:.....::.x..:........x..............x..x..:..............x.....:.........................x:.x.:.:. 125M 105/125 84.0% 125/94230402 0.0% 0/125 0.0% 7849815 NA +3856 chr4 + 190214555 26412290 26412289 26412389 100 TGGCACTATCTTGGCTCGCTGCAACCCCAC-CTACTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCGTGCGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....::..x..------..:..:...x.x-..x...........:.x...x..x.x........::::....:....:......--.....:....::.. 12M6D12M1I54M2D14M 70/92 76.1% 93/94230402 0.0% 9/92 9.8% 8215176 NA +14109 chr4 + 190214555 26415385 26415384 26415645 261 TGTATTCATAATGTTCAAGGAAAG---GAAATGCTTTA-------TTGAATCTAATTGATTTTTGCTTCTTGTTTTTTTTTTTCCCCTA---------------------------TTATTCTTCAGGTTTTTTTGCCCACCTCCTTGTGTATATCTTATGGGCAGTGGATGGAAGAAAAAAAAAGAACAAATGGAACGCGATGGTTGTTCTGAACAAGAGTCTCAACCGTGTGCATTTATTGGGATAGGAAATAGTGACCAAGAAATGCAGCAGCTAAACTTGGAAGGAAAGGTAAA chr4 - 94230402 18568361 18568360 18568658 75661745 75661744 75662042 298 TGCATATATAAAGTGCAGTGAAAATGCAAATTGATTGAGAAAGCTTTGGATCTACAACAGTTTGAATGCTTGTTTTTATTTTTTCCTTAAAAATTGGGTGTAATCTCATAATGTTTTTCATCTTCAGGTTCTTTTGTCCCCCTCCGTGTGTGTATCTTATGGGCAGTGGATGGAAGAAAAAAAAAGAGCAAATGGAACGGGATGGTTGCACTGAGCAAGAGTCACAGCCTTGCGCCTTCATTGGAATAGGAAACAGTGACCAAGAAATGCAGCAACTGAACTTGGAAGGAAAGGTAGA ..:..x:....x..x..:x....:---:..x..x..x.-------...:.....xxxx.x...x:x.x.........x.....:..:..---------------------------..xx..........:.....:..x.....x.....:...................................:...........x........:x....:........x..:..x..:..x..:.....:........:....................:..:..................:. 24M3I11M7I44M27I182M 213/261 81.6% 298/94230402 0.0% 37/261 14.2% 7847024 NA +14474 chr4 + 190214555 26420538 26420537 26420743 206 TTTTCTTTCACAGAACTATTGCACAGCCAAAACATTGTATATATCTGACTCAGACAAGCGAAAGCACTTCATGTTGTCTGTAAAGATGTTCTATGGCAACAGTGATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAAGTCATCTCCAAACCTTCCAAAAAGAAGCAGTCATTGAAAAATGCTGACTGTATGTA--------TGCTTTTCTTA chr4 - 94230402 18570214 18570213 18570427 75659976 75659975 75660189 214 TTTTTACCCACAGAATTATTGCACTGCCAAAACGTTATACATATCAGATTCAGACAAGAGAAAGCACTTCATGCTATCAGTAAAAATGTTCTATGGCAATAGTGATGACATCGGTGTGTTCCTCAGTAAACGAATCAAAGTCATCTCCAAGCCTTCTAAAAAGAAGCAGTCACTGAAAAATGCAGACTGTAAGTATTTTATGGTTCTTTTCTTA ....:x::.......:........x........:..:..:.....x..:.........x..............:.:..x.....:..............:...........:..............:..:..:..x..............:.....:...............:..........x.......x...--------.x......... 195M8I11M 178/206 86.4% 214/94230402 0.0% 8/206 3.9% 7850324 NA +19411 chr4 + 190214555 26424326 26424325 26424759 434 TGTTTTTTCTTTGCAGTATGCATTGCCTCAGGAACAAAGGTGGCTCTGTTTAATCGACTACGATCCCAGACAGTTAGTACCAGATACTTGCATGTAGAAGGAGGTAATTTTCATGCCAGTTCACAGCAGTGGGGAGCCTTTTTTATTCATCTCTGTGAGTATAAA------AGTGTGCATTT-----------------------------------AATGTTTTT-------------------AGTGTGAAATTGTT-------AAAATCT---TTTGATGAGATA-CATGGATATATTAAGTTTTGTCATTTGCCTAATCATAAAATAA---ATTTAAAAAGATGACAATTTGATTTATTTTTCCACCTACTGCAGTGGATGATGATGAATCAGAAGGAGAAGAATTCACAGTCCGAGATGGCTACATCCATTATGGACAAACAGTCAAACTTGTGTGCTCAGTTACTGGCATGGCACTCCCAAGATTGGTATGGCTCTACTTTT chr4 - 94230402 18571853 18571852 18572346 75658057 75658056 75658550 494 TATGTATTCCTTGCAGTATGTATTGCATCAGGGACAAAAGTGGCACTATTTAATAGACTTCGATCCCAAACAGTTAGCACCAGATATTTGCACGTAGAAGGCGGTAATTTCCATGCCAGTTCACAACAGTGGGGAGCATTTTACATTCACCTCTGTAAGTAAAAACAAAGGAATATATATTTTTAACTTCCCTCCCTCCATCCCCACAAAAAAGTCCTGTGTTTTTCTTCCTTATTAATTGCCCGAGTACAGATTTGTTTTGTTACTGAGTTTATATTTGATGTAGTAGTGTGG---TATTAAGTGT-----TCCTCCTACTGAGAAAATCATTTATTTAAACAAATAAT-GTGGAACTTCCTTTTTCA-----TGCAGTGGATGATGATGAATCGGAAGGAGAAGAATTCACAGTGAGAGACGGCTACATTCATTATGGGCAGACTGTCAAACTTGTATGCTCCGTTACTGGCATGGCACTCCCAAGACTGGTAACGTTTAATTTCT .:.x.x...:..........:.....x.....:.....:.....x..:......x....x........:........:........:.....:........x........:..............:...........x....x:.....:......:....x...------.:.:.::....-----------------------------------x:.......-------------------...::::.x.....-------x:.:.:.---.......x::..-::...---........x.-----.::x....x.x.x.....x.---.......x.:..:.:-:.xx:.:..x:....:..-----.....................:....................xx....:........:........:..:..x...........:.....x........................:.....xx.:.:x.:..:. 165M6I11M35I9M19I14M7I7M3I12M1I5M3D10M5D20M3I15M1D18M5D134M 337/420 80.2% 494/94230402 0.0% 88/420 21.0% 7852473 NA +11197 chr4 + 190214555 26428705 26428704 26428875 171 AATTGTTAAATATAGATAATTAGGAAAGTTGATAAGCAGACCGCATTATTGGATGCAGATGATCCTGTGTCACAACTCCATAAATGTGCATTTTACCTTAAGGATACAGAAAGAATGTATTTGTGCCTTTCTCAAGAAAGAATAATTCAATTTCAGGTATGTT-TTTAAATT chr4 - 94230402 18573538 18573537 18573709 75656694 75656693 75656865 172 AACTTTCATTCACAGATAATTCGAAAAGTAGATAAACAAACAGCATTATTGGATGCAGATGATCCGGTATCGCAGCTCCATAAATGTGCATTTTACCTTAAAGACACTGAGAGAATGTATTTGTGCCTTTCCCAGGAGAGAATAATCCAATTTCAAGTGAGTTGTTTAAACT ..:.x.:.xx:.:........x.:.....x.....:..:..x.......................x..:..:..:..........................:..:..x..:....................:..:..:........:........:..:x...-......:. 163M1I8M 142/171 83.0% 172/94230402 0.0% 1/171 0.6% 7855167 NA +116140 chr4 + 190214555 26429864 26429863 26435017 5154 TAAAACTTAGTTTCTAAACTT-CTTTCTTTATTAGGCCACTCCATGTCCAAAAGAACCAAATAAAGAGATGATAAATGATGGCGCTTCCTGGACAATCATTAGCACAGATAAGGCAGAGTATACATTTTATGAGGGAATGGGCCCTGTCCTTGCCCCAGTCACTCCTGTGCCTGTGGTAGAGAGCCTTCAGGTGAG---------------------------AACGCCT----------------------AGTCCAAGTTGGCCTTCAGCTCTTTGCAGCTACTCTCAGCTGTGA--CCTGGCATCATTTCATTTCATGGGAGTTTTG-----ATTTTTCTCCAAT---CGTCTGATTAGGGGATTTTT---ATATACACCATT--TGTTGATTTAAAGAAAAAAAAACAAAATTAGGAGGAGCGTACTTGCCAGAAAATTTAAATGT---AAATAAACTTGTA-TGTTATCTTGAAATGTTTTTAGCTAGCTTT--GTAATAAAAAACA---TTTT---------AATTGCCCTTT----TTTAAAAAAAACAAA--TGAAAGTTGAATGAGAATCTAATTTGTGTACTTTAATGAAAAATGAAAAGTTTTCTCAGTGTTGT------------------------------------------------------------------------------------------------------------------------GA-------------------------------------------TTTTCTGTGAATTG-------------------------CAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAACTTACAGGACAGAATTTCACTCCAAATTTACGAGTGTGGTTTGGGGATGTAGAAGCTGAAACTATGTACAGGTAC-----TTGATAAAACTTTTTGCATCATCCAGAGGTTGTGAGGGGTGTGGGTACAGGAGATTCTTTCCTGGCACTGATTGTAATGTATTAAACAACCTTGTGTTAAGTCTCATTTTT--AACATGTACTTTGCTTTTTAAAGTGTTTTTAAGTGATTTCTATTTCCTCCTCAGGTGTGGAGAGAGTATGCTCTGTGTCGTCCCAGACATTTCTGCATTCCGAGAAGGTTGGAGATGGGTCCGGCAACCAGTCCAGGTTCCAGTAACTTTGGTCCGAAATGATGGAATCATTTATTCCACCAGCCTTACCTTTACCTACACACCAGAACCAGGGCCGCGGCCACATTGCAGTGCAGCAGGAGCAATCCTTCGAGCCAATTCAAGCCAGGTGCCCCCTAACGAATCAAACACAAACAGCGAGGGAAGTTACACAAACGCCAGCACAAATTCAACCAGTGTCACATCATCTACAGCCACAGTGGTATCCTAACTACCGTCTTTTTGCTAGGACTTAAACTGACTTGAGTGTGGCAAAAAGTTAACAAAAAAGGAGAAAAAATGAACAATCGTTTGTGGTTTCTTGGGAAAA---CTTTTCATACCAGGTGATACTATTCAAAAACCCCGTTGTCTCCCTGCAAGTGCTGATTTGAAATGCAGAAGCCACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAATCAAAATGTATAAA---TATTGGAAATCAAGTTTTTCAGCTGTTTTGTTGGTTGGTTGGTTGGTTTTTGTTTGGTTTTGTTTAAATGGGCAAGAAGTAAATAATGTGGCTGGAATACAAGTTGAACAAACTAGAAGACACAAATCTAACATAGTTTTTATGGACCAAGGAACTTGTATATTGTATAAGCTTTAG--TAAAAGGTACATTTTCACCATACCTTTTTTTATATCACGGTATTATAGTACAC-CTTGTTACCAAATAGGTTGTTCTCTTCCCCACCCACCTTTGAGCTTTTGCTCTAAAATACATTCAGGTTCCAAGCCTGACCATCCTTGTTTAATC----TATCATACTCTTCCAGGTTT------------TTTTTTTTTGGTCTAAGGCTGGAACTTTTTTCTTTTTTTTCAGCTGAAGTCTTATGACTTTTCATGAGTCAAAATTGTTTGGATTTCAGCAAGTCAAATCTTGCAAAGGCCTGCATATTTTTTTTAAGATTATATGAAGTCTGTGCAAAAGCTTTAAAAAAATGCCTCTGCCTTGCCTGCAATACATGCAATGTATGTTAAC-TTAGT-CTCTCTTCTCAGACACTGTTGGTAGTTATTTCTGTGTTTTCCTTTTTTTAAAAAAAAATATGGACTTATTGTGGTTATCTGAGAGGTTCTAACATTCACATGCAATTTGGTGTGGCCA-----------TTTAGC-----TATTAATGA--GTTAATGGCGCAGA-ACTTGTTGATA--TTTGAAGTGTT------------CTCTCCCCTTTTCCCATGACGTAA----ATACATAGGTGTGTTCCAGGATTTGTTCAGGTTTTTCCCCCCTCCTAATCTTGTACATAACTTGTATTATGTGTAAGTTAAACATTTTATTTTGAACTTGGAATGTTCCCAGTGATTTCATTCAGCAGGGTATTTTCTGCCTTGTTGGCAAGTGAC--AAAAAATATGGGAAGTATTTGCTACCA-----GTTGGTAGATGGTGCCCTTAATGGT--AGAATGAGGAAAATGTCCGCAAAAGCATGTTTTATTATCTTTACTTTTTTGGGGGGTTGGAGGGGGTAGCCTAGCCAGAACATCATTGTAATCTTAAAAC--ATAAGATGCTTTTATT---AGATGATCA-ACTAAAATAGCTGGA--AGACAGTACT--TTAGAAACAGATAGTTGTAAGATTATAAA------ATGCAAATGT-AACTTATGTTTTCATTTTTTTCTCTGCCTTTTTTGTTTGTTTGTTTTCTCTTTTCCAGTACTGAGCATCTCCA-----CAAATGTCTCCTAACTCAGAAAATGTTTCTTTTCTTTTCAGTTGAGATTTGGTTGCATTCAGGGTTGTAGGTTGGCCTTGCTTGCTAACCCCGCCG-GTTTTACCGTGCTTTCATTCCTGAACTTTGTTTATGCCTTTGTTTGGTTTCTTCGAAATTG-CAGCAGA-CTCATTGGGCTACATTTAGTACAGGAACCACGTGTGTAATGTTATACAACACAGTCTAGTAATACAATCATCCCTCTTAGAGTAAAA--ACTACCTCTAGATTGTGGTAAG-CTTTTACTGTCCCATAAAACAGGAGCCACAG-TACCTTATGAATGCAAAACTGTAACTTCCTACAGTGTTTCCCTACAGAACATTGTCTTTCTGGTGTCCTG--GGCTGTTTTGAAAAAGTTTCCATTAATAGACTTTTTA-----------GAAATTATTATTAGT----AGCATTTTTTTTCCAGCTTTGCTGTCTTCATCACTCACTCTATGCTCAGACTATGCCACTGTAAATATTCTTCCTAACATCTTTAAATCGCCTTTTCCTCAGT---TTTCAAGGGGAAGGTCATTTGTAAAGCACGTTAGG----TGGTT-AAATCAGTT---------------ATTGCGGTTTTCTCTTACTGCAAGCCTTTTTAATCACCCCCAGGCTGCATTTTATTCTATATCGCCTTTTTTCTTCAAATCTGCTCCAATCACTCACT-----------TCTCTCTTATAAGCTAATCCTGCCTCACACCTTAAATCTGTTTCAGTGATCAAGGGCAGAACTCATTGTGGCCTTATCTTTCTTTGTTGTAATTGTTCACTGTCTCTTTCTTACAGACC-----ACTTATTTCTGAGTAGTAGTTATTCCTCTCTATGGAGTCATGGCAGGAATCATTACACAGTGCTTTTGTTCAGAGCATGGACATGT-TCCTAGTGCTGCTTTGCTTTAACGGCCACAAGTTTCCTCCACTTCCTAGGTTTGGTATTTAGTTAAGGAAT-CATATTAAATTAACCAATAACAAAAGAGATACTTTTGAAGAACAAACTATTCCTTACCCA----------------------TTTTTGTAGCTCAAAAATAATTTTTCAAGTTCATGACCTTATTAAAATGAACTTGTGTTTTTTTAAC----------AAACATGTATGTTTTATTTTGATAGTTTCTTTCCGTAAGATAATTGAAATA---TTATACTGTAAACCCTTTTCTTTTCTT--TTTTTGAAAAGTCCAAGAATGTACTTATACAGGCATTTTTCCCCACCTATTTTTGGCCATTCT-CATACCACAGACTAAAGAGTGAAA---TGATTTGTCCATTGTAGCTTATTGTTTATCAGTAGTTCTTTTGTCAGCTGCTTACATTTTTTCTTTCATGGTTTTGTGA-ATCATTTT---CAGTATGTAATTTATAGGA---ACCTTGTCCTCTGG----TTATAGTAGACTGTGTGCCCTCCTCCAGTGATGGCATTATTAGACATGCTGGTCATTTACCCTCAGAAAGACTCT------CTTATTAGAATGGTGAGTGCTT---CAGTT------------ATAGTATGTTTGAATTTTTAAAAAATTCTGTTTTAGAAATGTATC----TTATGCTCTCATGACTATGC------AGTTTCTAAA--------------CATACACATAGAAGCTGAGTCTCTGATCCAATATGTTTTTATTTGTTCCATTTAATTTATCACATAGATTGGGAAGGCAAGCTAAA-----AGCCTTAAAAATGCCCTTTA------TATTTTGAGTG-------ATTTCAGCGTTGAACACTAGTATACTATCTA--AATTTGCTGCTCACTTTCTTTAAACTGTGGCAATTA---------AAGGCATGTTTATACATGACTTAATCGTGAAATGTTTGTCACTCTT---ACTGCACAGACTTATCTGCAATCATAACTGGTTAGTTTTTTTGTTTTGTTTTGTTTTATTGTTTTTAATGAAACTGGTACCATCTGTGCTTTC------ACAAAAAACTTCCAATGCCATTTTTGAGAACTAACCT----------AACTAGTCATGCTAACCAGAA--AATCCACTGGGGAGGAGGTTCCTTTTGAAACAAAATGCTGTTCAGTTAGTAACCAAGTTACT---TTGATTGCAAAAGCAGCTGTGTTTCTGATAAGTACTGAACAAATGTGTGTAATTTTCTGTGCCAGACTTATGACTTTGTTTTCAAGCACTGTAATGTGGGATGGA---------TGGTTAGAAACAATAATATATTAGGGTTTCTGTTTAACCCTTTCAGGACTGAACTGTATCTCCTTTTGTTAATTT--------TCCCCTGTGTTGTGATAAATGTTTGCCAGCATTCAGTACTGTGTTGG-TCCAGATGTAGGTTTATATGCTCAT---TTTTAGCTTATTTCTTGTACCTTGCAGCATGCTCTACGCATTCAGTCCTTAAGGGGTTTATTTTACAAACTGTGCGCCTGTAAGGTTTATTAGCAATAAGATAG-AAAATTGAGCAAGTTTATACCATAATTTTGTAGAAAAAAAGAATCTGCTCAGTTCCATATTTCATCCGTGAAAAA--CTTGCAATACGAGCAGTTTCAAGGAATAAATAAAAAGGAAATGTAAACCATTGTAAAAGTCTTCTGTCGAATGTGCCTGATGCATGTATTATCGTCTTTTATTTCAGAATAC------TTCATAAAGATAA-AATTAAATTCTATATTATAGTTGGTGT chr4 - 94230402 18576417 18576416 18581743 75648660 75648659 75653986 5327 TACAGATCAGACTTAAAACTTACTTTCTTTTTAAGGCCACTCCATGCCCAAAAGAACCAAATAAAGAAATGATTAATGATGGAGCTTCTTGGACAATCATTAGCACAGATAAAGCAGAGTACACATTTTATGAGGGGATGGGACCGGTCCATGCTCCAGTGACACCTGTGCCTGTTGTAGAAAGTCTTCAAGTAAGTGACGTATTTGTTTGTTTATTTTCATAAACTCTCTCACATAAGATTATTCattttaaatttaaattttattttaCTTTTGTG-GGCTACTCTAGGGGAAGATTCCTACCAGCTTTACATAAGATAATTATGTTGCAATAATTTTTCTCAGCTGCATTTCAGAATATCATATCTATCACATGTATACTATTAATATTGGTC-ACATGAATAATAATAATATT----GTTCTGTACTTT---GAGAATTTTACTTTTTAAAATACTATTGTGGTGATATCTTTAGG-ACTTTTACTTCTCTTTTGGTTATTTAGAACAGTGTTTTGACTCTTGAAATAGCCATTTACACGTCAAACAGTACCAGGCTGAAACCATACTAAGAAAATGAGCTATCTGCTCT--TGAAAAATTTAAAGCTCTCCTAGTGTTGTCTGGAAGATGTTGTACTTTGGTAGTATCTTTTTGAGTTTACTTTTTTTTACAGTTCACTTGTGTAGGTCTGTTTATTTCATCCAACTGATATTGGTGGCATTGTTTACAGTTCATATATGGACTACAAAGTATTTTTTTAGGGTATTTTTGTTCTTAATGTGTTTTTTTTTGTGGGTTTTTTCTTTTATATTCATCCCTTCATCCAGTTGAATGGCGGCGGGGATGTAGCAATGTTGGAACTTACAGGACAGAATTTCACTCCAAATTTACGTGTCTGGTTTGGGGATGTGGAAGCCGAAACCATGTACAGGTATGGCGTTTCCTACTACTTTT---ATGATC-----GTTACAA----------TTTACGGGATGTTTTGC-----------ATAGTGTATG-------------------CTCATTCTTTAAGCTTAAGTTTTGTTTACTAAGTTGACTCT--------CCTGTTTTC----CAGATGTGCAGAGAGCATGCTATGCGTTGTTCCAGATATTTCTGCATTTCGAGAGGGTTGGAGGTGGGTCCGTCAACCAGTCCAAGTTCCAGTAACTTTGGTCCGTAACGATGGCATAATTTACTCCACCAGCCTTACCTTTACATACACACCGGAACCAGGGCCACGACCACACTGCAGTGCTGCTGGAGCAATCCTCAGAGCCAACTCAAGCCTCATGGCTTCCAGTGAAACAAATGCAAACAGCGAGGGAAGTTACACAAATGTCAGCCCAAATCCAACCAACGTCACATCATCTACAGCAACTGTAGTTTCCTAACTACCGT-TGTTTGTTTGGACTTTAACTGACTTTTAAGTG---------CTACATTCAAG----AGAACTGAACAATT-TTTGTGGTTTCGTGGGAAAACACCTTTCCATTTTAGGTGATATTATTTTGAACC-----TGGTTACCTGCAAGTGCTAATCTTAAATATAGAAGCCACAATAAAAAAACAAAACAAAAAC---------AAACAAACATCCAAACATAAGAACTTTATTGGAAGTCTA-TTTTTCAGCTGT-------------------------------TTTTTTTTTAATGGGCAAGAAATGAA-AATGTGGCTGGGATACATGTTGAGCAAACTAGAAAACATGAACACAACATAGTTTTTATGGACCAAGGAAC-------TTGTATAAGCTTTAGTATAAAAGGTACATTTTCACCATACC-TTTTTTGTATCACAACA-TATAGTACACTTTTGTTACCAAATAGTTTATATTTTTTTT------TCTCTGAGCTTTTGCTCTGAAGTGTATTCAGGTTCCAAGCCTGACCATGCTTGTATAATCTAATTACCATACTCTTCCAGTTTTAAAAAAAGTATATATATTTTTGGTCTGTGGCTGGAAC--TGTTCCTTTTTTTAAACTGAAGTCTTGTGACTTTTTATGAACTGAAATTGTTTTTATTTCAGCAAGTAGAACCTTGTAAAGGCCAGCATATTTTTTTTAAGATTATATGAAGTCTGTGCAAAAGCTTT-AAAAAATGCCTCTGCCTTGCCTGCAATACATGCAATGTATGTTAACTTTAGTGCTCTGTTTTCAGTCATTGTTAATAGTTATTTC--TGTTTTCCTTTTTTT-----TGAATATATATTTATAGTGATAATTCATGAGGTTCTAACATT-ACATGAGTTTCGTTTTTTCTAAAGGTGACGTCTCAAGCAGTCATATGAATGATTGTTCATGTCACAGGCATACGTTGGTGTTTTTGAAGGGTTGTTACTGGGTTACTCTCCCTCTTCCTTTCACAGTCATATTGCATCTGAAAATGTTTCAGAATCTGTTCAGGTTTTT--------CTATTCTTGTACATAATTTGTATTAAGTGTAAGTTAAATGTTTTATTTCGAAAGTGGAATGTTCCCAATAACTTCATTTGGCAGCATGTCTTCTGTCTTGTTGGCATGTAACTAAAATATCATGAGAAGTATATGCTACAAATGAGATTGGTAGGTGATGCCCTTCATGGCTAAGAATCACA-----------AAAAGCATGTTT--TTCTTCATACTGTTC---------------GGTAAATTAGGCCAGACTTAAGTGTAACACTTGCATTGAGAACGTGCTTTCATTGTGAAGTGATCATACCATAATAACTGAAGTAAATTTTATTACTTAGGAATGGGCAAATAGAAAATCATAAAAGCACTATGAAGATGTCAACTCCTCCCATCCTTATTTCCTATG----------------GGTTTCTCTTTCCCTGCCAACAGCTTGTGCAACATTCAAGTCTTCTCTCCATCATAAA-------TTTAAGGCTCATTTGCACTTTGACTTTGTTGGTCGTTGT--GTTTGTTTTTCATTTTGACTTTGCTGTGTTTTA----GCTCTCCTTGCAGACC--------------TGCCTGCTTCATCTGTAATTGAAAATATATCCCACTAGTTCATTCATAGTCACAGAACTAGACATAGAA--TTGTAGGACAAGTTCTGATAGCGTGAT-----CTTGAAAAGCCAAAATATGAATTTTATGGTTTGTTCAGCCTTTTTTTCTTCCCTGAAGCATGAGCCACAACTGCTGTGTAAATGTGAACCTGTGGCTTCCTACACTG-------------CATTGCTTTCAAGCTTACCTGTTGACCATTTTCATAGGGTTTTTATTTCT-GACCACTTACTCCAGTTCCGGCACCCACCAACATTTTAAAGCATTTTTGCTGCACCATATTTGTGTAC-TCTGACGCTCCATTTT---ACT-TGTTTGTTTTAGTGCTCCACTGTACATGTGAGAA------------CAATGTGGTTAAAAATGGAAATTGGTTATAAAGCATATTTAGATAATAGTTGAAATCAGTGCCACTGTCCTTCTGAAACGTGCTTGTATCCTACCACAGGCCTTCATATTTGCTCT---GCTGTATTATG----------------------AAACAGACTCCCATGACATAGTCACAATGCTGGTCCTTAGCACTAGTGGATACTGCCT--CACCTCATCTCTGTTTCAGTGACCAAGGGCAGAATTCATTGTGGCCTTATCTCTGT---TTTAAACTGTTTACTGGCATTTACTTGCAGATCTGTTTACTTGCGTATATGCTATAAAACTTCATGTTAGTCGTCTTGTGGCAGGAATCATTTCACCGTGTTTTTGTTTGAAGCACATAAGTATCTTACAGTACTG-TTTAATTCAGAAGCCACAGATTTTCATCGCTAATTAGACTGAGAATTGAAGTGATATATATATATTGAATT----------TAGAAGGATA---TTCAAGAACAAACCATGATATACACACAATAGGCAAACCATAACGAGTCTTTTGTCCTTCAAAG--GATACTTTAA----ATAGCATTTCAGAACTTGACACCTGCTTTTATACTCATTATTTTAAAATTTTTACATGTAAATGCAATACTTTTTATATTCAGTTTATTTGCAATAATTTTGCCCAATAGATATATTATATTCCTTGACTTGTAAAGAACCTAACGA---------------------CCTAGCCTTATTTCTGCTGTTCTACACACTACAGCCATCTGGGTGAAAAACAGATTACTAAGTTGT-GCTTAC----------AAGACCATTTAAAACC------CCTTTTTTCCTT--TGGGCTTGTGGCACCATTTTTGCCAGTAGTTACTTTGTAGTACAGAAATGGTCTTCCAAGTCCTTACTGTTGTTCAGATGTCCTGTTGTTCAGAT-ATATTAT----CTTCCTGAACATTTTCCTGTGGGGTGTTACTGTTACATTTATTGGCCTTGTGAGCTGTTAACCAATTTTCATGATATTAACAATATCTCAACATTTTGATACAAG--TACTTTTAGAATGTTTCAGTATGAAACAATTATAATTGTTCAAGTCTAGCTGTTAAGTCTGCTGTTAATTCTGTATACATAGAAACTGAGTCTGTG-TTCAGAATGTTGTTA-TAGTTCCAACT----------GTAGGATGAAAAAGCAAATTATGTGCTCAGATTTAGCTCTGCCTTTTCTTGTTTTCTTTTGTTTGGAACTGCATTTCAGAATTCAACACTAGCATAGTCTTTAATAACCTGCTGCTGATGTTTTT----CTTTCCTAATTATTTGCCCCGAGGGCAT-CCCACAATTGTGTTAGTAGTTATAT-TCTGTACTTCTTTTCATTGCACAGACTTGTAAG--ATCAGAA-TGGTTA----------------------------CCTGAAAGACAGTTGTA-AATCTGTGGATTCCCGTATACAAAATATT---AACGCCAAGTGAAAAAGAGTACCTATTGGAAGTAAACTACCCACTTTACATTAAATGACTCCATAGAGG----TGTCCATCCTGAAACTAGATGCTCTTCAATTATTAACCATGTTATTTACTTTATTTCAAAAGCAGCTGTGTTT---ATGAGTACTGAACAAATGTGTATACTTGCCTGTGCCAGACTTTTGACTTTGTTTTCAAGCACTGTACTGTGGGATTGAGTGGCAGCTTTGTTAGAAGA---AGTATATTAGGGTTTCTACTTAACCCTTTTAAGACTGAACCATTTCTTTCCTTTAGAGTTTATAAAGGAGCAGTTCTAACTTCATAAATGTT---CTTTGTTCAACATTGCATTTGCCCCATATGGAGGTGC-TATGCTAATATCATTTAAAAAAATAAT--AATCCTGTAGCATG-TATATACATTCAGTCTTAAAAGGGTTATTTTTACAAACTGTGCACCTGTAAAGTTTCTTAGCAATAAGGTAGAAAAAATGAGCAAGTTTTTACCATAATTTTGTAGAGTGAA-----CTGCTCAGTTCCATATTTCATCAAGAAAAAAACCCTGCAATATGGGCAGTTTTGAGGTTTAAATAAAAGTGAAATGTAAACCA-CGTAAGTGTTTTTTGTCAATTGTACT--GTGTGTGTATATGTGCATATAATATCAGGCTGCATTTTTTCTACAAGGCTAACGATAAAATGCCATGTTACTATTGATGT ..x.:x.:..x:.:x......-........x.x.............:....................:.....x........x.....:.......................:........:..............:.....x..x....x...:.....x..x...........x.....:..:.....:..:..---------------------------...x.::----------------------.:.::..:..xxx:..:.x:.:.x..-:........x:.xx:x..--...:x..x.x..x...xxx..::xx:.x...-----.........x:x.---:x..x..x..xx:x..:.x.---..:..:..:...--.:...:.:-.x.x:..x..x..:..x...----.xxx:......x---..:.....x.x.x.---.....xxx....:-..x......x.::-::.....x:.xx....--..x..xx.:....---....---------...x...x...----x.:...x.:x..x.:--.....x:xx.x.:....xx.:.x:.:.x.:..:.--........xx....:.:..::........------------------------------------------------------------------------------------------------------------------------..-------------------------------------------....:....::..x-------------------------..............:.....:.........:.x...................................x..x..............:.....:.....:...........:-----..xx..xx......---..x...-----...:::.----------.x:.x.:...x:...x.-----------:..:.....x-------------------......:..--.:.x.:x::....:..x:...:x..x:.:.--------:..:...:.----...:....x......:.....x..:..:..:.....:...........:.....:........:........x...........:....................x..:.....x..x.....:....................x........:...........:..:.....:........x..x...........:x.......:.......xx:..x.::.:.::...x....::.........................:.:....x.....:......::.................x..x..:..x.............-.x....:.x......x.........xx:x...---------:x...xxx...----.:..x........:-...........x........---....:...x::........:....:x:..x.-----..x:.x............:..:.x....::..........:........x....x.....x---------...x...x...x...::..x:..---........:..x.-............-------------------------------....x...x............:.:..-...........:.....x.....:..........:...::..:x:..........................-------...............--........................-......:......:::.-..........-:..............x..:.x:.:..:::------:..:..............:..:.::.......................x.....x.....----..:.............x...------------.x.x..........:x.........--.x...:.......x.:..........:........:....::::.........xx............x:..:....:.......x...........................................-..............................................-.....-....x..:....x..:....::..........--...............-----x:.....:x.:....x...:.x..:::x..............-.....x:x..:.x.x.xx.:.-----------.:x...-----...x.....--...x...x.:...:-.:x:....:.:--.......x...------------.......::..:.::x::xx..x.----::.:x.:::x:....:...:..:.............--------...x............:........x............::........:...xx.............:.:.:......::....x:.:.:.....:..........x..:..--...x.x:...:.......x......x.-----:.......:..:.......x....:--.....x.x:-----------............--..x.::x....x..:---------------....:x:...x.x::..x.x.x.....:x:.x:x.:--.x..x:......:...---.::......-..:.x....:...:.--.:.:xx..:.--....:..::.::.:x.:x..:..:.....------...x.:....-....:x.x::x..x..x...:..x..----------------.x.........:..x.:xxxx...x.x.x..-----...:.x.:::..xxx...x...-------...xxxx:...x...x:x....::.x::..x:xx.....--...x.::..x.x.x:.:..:::..:.-......----...:..x..x.x..x.--------------..::..x..:x.::.x.....-x.::.x.-.:..:.:.x::.:x:x....xxx:....:.x:::.:x..--..:..x:...x:x...::..:::::..-----..:xx.:..:x...--.:x.x:.:..x:x.x..x.x..-.....x:.x.:..x.:..:..x........:-.:.:x.:.:....::..x....::.........x..-------------.....::..:xx.x.xx....--.:.::....x.x.::....::...xx.-...:x:...-----------.x.x::.::.x:.x.----.........x:.x..x.x.xx:...x.x.-..xxx.:...:..x:.---...-..::xx.x.x.:.::..:x.:xx....x.xx:..------------..:.---x..x..::x.:.::.::x..:.......::..x:.----.:...-........x---------------.x:.:.x..x.x..:...::..:.....:x..x.::.:.:---....:...x.:----------------------...:xx:....x..x..x:.x.-----------..::.xx:.:x..:x:..x......--.....:.xx.............:...........:.................:.x.---..xx..:....:....x.x:..x...:....:.-----....::x.x.:x.:x:..:xxx...x.x.:x:.x.xx.::..............x...x...:.......:::....::x.x:.:.-.:x:...:...-...:x..:.:x:......::...:.x:.:..xx:...::.x:.x...x.:x.:.x:x..-:.....:....----------x.:.::....---..x..........:..xx:x...x..----------------------:......xx:.....:--:..x:..:..----..::.x..x:x:..x.x:..x:x..:....x..x:----------...:x.x..::.x.x.x.x::...x...:.x.x:x:.:xx..x...x....---..::x.x:..:.:x:x..x:x..:...--:..x.:..:.::.:..x:.---------------------..:x:...xx...:x..::....-..:..:....x.xxxx.:......---x....xx.xx:....-.....:----------x..x:.x...:xx.x.------.x.......:..--...x:.....:-.:......---.....xx..x...:...x.---.xx.x...:..:::----...:x..x.x:::x:..:...x:.x:xxx...-::.....----.x.x...:x.....x..:x::.::x.x:x..------:.....:.xx.x.....:xx..---..:..------------.:.:...x.:x:x.....x.x.x..x--.::...x::.....x..----.x.x:.xx.:..:.:.:.x.------..:.x:...:--------------::..:........:........x..-.:..:x.....x...-.x......x:.----------:...:x..::..:....::..x:-----..x:...:xxx....:...x------.x.....xx..-------.......x:..x........:...x.x.:..--..::.......x.:x..:..----..x.xx:.....---------.:.....-:::.:.xx..xx...:.x..x.x..-.:...xx:....---.:...........:.xx.--....x..-......----------------------------::.x..x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21M1I174M27I7M22I26M1D18M2I31M5I13M3I20M3I12M2I8M1D20M4D12M3D14M3I13M1I13M1D16M2I13M3I4M9I11M4I15M2I34M2D29M120I2M43I14M25I111M5I14M3D6M5D7M10D17M11D10M19D9M2I30M8D9M4D326M1D32M9D11M4D14M1D20M3I31M5D61M9D23M3I13M1D12M31D26M1D71M7D15M2I24M1D17M1D10M1I29M6D60M4I20M12I25M2D128M1D46M1I5M1I32M2D15M5D42M1D21M11I6M5I9M2I14M1I11M2I11M12I24M4I36M8D112M2I27M5I25M2I9M11D12M2D15M15D36M2I16M3I9M1I15M2I10M2I29M6I10M1I26M16D31M5I22M7D39M2D26M1I6M4D16M14D21M1I7M1I39M2D27M5D14M2I22M1I31M1I36M13D21M2I27M1D9M11I15M4I29M1D16M3D3M1D34M12D4M3I35M4I5M1I9M15I40M3D11M22D22M11I25M2D56M3D33M5I86M1I11M1D59M1I11M10D10M3D26M22I16M2D10M4D35M10I51M3I27M2I19M21D23M1I24M3I15M1D6M10D16M6D12M2D11M1I8M3I19M3I14M4I32M1D7M4D31M6I22M3I5M12I26M2D17M4I20M6I10M14I25M1D15M1D11M10D23M5I20M6I11M7I31M2I20M4D12M9I7M1D25M1D12M3I18M2D7M1D6M28D17M1D13M6I10M3D24M10I21M2I12M4D46M3I24M3D78M9I11M3D61M8I23M3D21M1I15M1D9M3I15M2D14M1D72M1I39M5D31M2I50M1D26M2D33M6I13M1I27M 3380/4702 71.9% 5327/94230402 0.0% 1077/4702 22.9% 7853447 NA +3057 chr4 + 190214555 26443886 26443885 26443953 68 AGATTTTGGGATTAAAAAAAAAATACTTGGTTGCTAAAATTTCACACTGATATGTATGTGCTGTTGTA chr4 - 94230402 54770909 54770908 54770976 39459427 39459426 39459494 68 AGAATCTAGGATTTAAATATCTACACTGGCTTTCCAAAATTGTATCATGATATGTATGTGCTGTTGTA ...x.:.:.....x...x.xxx.:...x.x..x.:......x:.:xx..................... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -28327023 -65903379 +3503 chr4 + 190214555 26467743 26467742 26467885 143 AGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGAGAAGGAGGA----GGAGAAGGAGAAGGAGGAGGAGAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGAAGGAGAAGGAAGAAGAAGAA--GAAGAAGGAGGAGGAGGAAGA chr4 - 94230402 44053989 44053988 44054130 50176273 50176272 50176414 142 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGA-------AAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGA .:...x.:....::...::...:.:.::.x:.:.:..x.:.:...x..:----.:....:..-------:..:...x:..:.x...x.x......x.::.....x..x.x:..:.x:.:x.:.x..--......:.::...x..x:... 49M4I9M7D57M2I21M 86/136 63.2% 142/94230402 0.0% 13/136 9.6% -17586246 -76644156 +3364 chr4 + 190214555 26467773 26467772 26467895 123 GAAAGAAGGAGAAGGAGGAGGAGAAGGAGAAGGAGGAGGAGAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGAAGGAGAAGGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAAGAGGAGGAGGAG chr4 - 94230402 29062385 29062384 29062507 65167896 65167895 65168018 123 GGAAGAAAGAGCAGGAACAGAGGCAGAAATATCTGCAAGGGAACCAGCAATAAAAAGAACCAGAGAAGAAGAAGCAGAAGAGATAAGAAGAGATTGATAGTTCTGGGATAAGAGGAGAGAGGG .:.....:...x....:x..::.x..:.:x.xxx.x.:.:...xx..x.:x.:...:.:xx.:...........x.....::.x.......::xx..x:.xxxx..::x........:::.:. 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% -2594612 -91635790 +3890 chr4 + 190214555 26467900 26467899 26468097 198 AGAAGAAGAAGGA-GGGGAAGAGGAAGGAGAAGGAGGGGAAGGGGAAGGAGAAGGAGAAGAGGAAGAGGAAGAAGA--AGAAGAAAGAGGAAGAAGAAGAAGAAGAAAGCGGGAAGAGGAGGAGAAGGTGTAGAGGAGAAGGAGGAGAGAGAGAAGGGGAGGAGGGAGAGGAATGGGAAGGGAGGGGGAGGGAGAGAGAGA chr4 - 94230402 60992639 60992638 60992816 33237587 33237586 33237764 178 AGACCAAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCA--------------------AACAGTGAGAGATGAGAGAGACA---GGATTAGAAACTGAGACAGGCAGGGTGGGGAAAGGAGAGACGGA ...xx....::..-:::.x...:x...:.x.:.:.:........:.:x..:..:.x....:::.x:...x......--...xx.....x:...:....:.xxx..x.x..:--------------------.:x:.x..::..x........x.---...xx..::.xx.::.::..x....x....:.:.......x:.. 13M1I62M2I33M20D23M3D44M 112/175 64.0% 178/94230402 0.0% 26/175 14.9% -34524739 -59705663 +3074 chr4 + 190214555 26477564 26477563 26477625 62 AATGAAACTACATGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAAAAAGGAAAG chr4 - 94230402 37322377 37322376 37322438 56907965 56907964 56908026 62 AAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAG ..x:...x:x.x..:......:..............:.:.:::....:.x.:.::....... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -10844813 -83385589 +3019 chr4 + 190214555 26477568 26477567 26477633 66 AAACTACATGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAA-----AAAGGAAAGAAAGAAAC chr4 - 94230402 7711337 7711336 7711407 86518996 86518995 86519066 71 AAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAAC ...:..x:x.::....:x.:.....:..............:...xx...-----.:...:.:.:....... 49M5I17M 49/66 74.2% 71/94230402 0.0% 5/66 7.6% 18766231 NA +3112 chr4 + 190214555 26477582 26477581 26477625 44 AAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAAAAAGGAAAG chr4 - 94230402 49250049 49250048 49250092 44980311 44980310 44980354 44 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGG .........:..........:.:.x:...:............:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -22772467 -71457935 +24486 chr4 + 190214555 26481644 26481643 26482173 530 GGGTGGCACCGAGGCACTCATATGGCTGTACGAGAACCTGGACAGAGAGGCTCCTGTGGTCCCGCCTTCCTCCTCCTCCCCCACCTCTCCCCTCGCCCCTGGGGGACCAGGATTGGGGCAGCAGGGGAAGGTGGCCATGAAGCCGAGGCGGAAGCGTTTGTTCATGAAGCAGTAGATGATGGGGTTGACGCAGGAGGAGGTGTAGGACAGGAGGAGGATGAAGGAAATGGGGGTTCCTGAGAGGCGGCGCTCTGCGGAGGCGGTGTCGTAGGCCCGCCAGGCGTTGGCGCTGAAGATGGGCATCCAGCACAGGAAGAAGAGGACCACGATGACGATGAGCATGCGGATCACCCTTTTCTTGGCCATCAGGTTGGCTGCGGAGCTGTTACTCCGGATGCGGTTGGCCCTGCTGCTGCTGCCGGTGGACAGCTGCCGGAGCTCCAGCTTCCTCGGGGGCCTGGTCTTTTGCAGGTAACACCCATCGCTGTCCTCATATTTGCCGCTGCTGGTGGTGCTAGGTTTCCTTTCTG chr4 - 94230402 18594430 18594429 18594956 75635447 75635446 75635973 527 GGGGGGTGCAGACATGTTCATGTGTGTGTAAGAGCACTTGGAGAGCGAAGCCCTTGTCGTCTTCCCCTCCTCTTCATCACCAACCTCTCCTCTAATCACAGGCGGCTTCTGCTTAGCGCAGCAGGTGAAAGTGGCTAGAAAACCCATGCGGAAACGCTTGTTCATGAAGCAGTATATGATAGGGTTCACGCAGGCAGAAGTGTAGGACAGCAGGTGGATAAAGGAGATGGGAGCTCCCGAGAGATGCAGGTCTGCGGAGGCGGTGTCAAATGCGCGCCAGGCGTTCACGCTGAAGATGGGAGTCCAGCAAATGAAAAACAAAACCACTATCACCATCAGCATGCGGATGACAAGTTTCTTGGCCATCAGGTTGGCAGAAGAGCTGCTGCTTCTCACCCTGTCTATTTTGCTGTTGCTCATAGTAGATAGCTGTTGCAACGGCACTTTCCTTTTCCTTTTGGCTTTGTGCAGGTAGCACCCGTCTCCATCCTCGTATTTGGCGATGCTGGTACTTCC---TTTTCTTTCTG ...x..::.x..x::::....:..xx....x...x..:....x..x..:..:.:...x...::x..:.....:..x..x..x........:..x::.x.x..x..x::xx.x..:.x........x...:.....:.x:..:..x.x......:..:.................x.....:.....x.......x:..:...........x...x....:.....:.....:.:...:.....::.xx.x.................:x.x..x...........x:.............x:.......x.x...:..x.::.....x..x..x..x...........x..xxx.....................x.x:......:.:..:.xx.:x.x..:x::::.....:....xx::..:..:.....::.x.:.xx..x:.....:xxxxx::...::..x........:.....:..x.::.....:......x..x.......:x.x.:---...:....... 516M3D11M 377/527 71.5% 527/94230402 0.0% 3/527 0.6% 7887214 NA +3149 chr4 + 190214555 26481771 26481770 26482003 233 AAGGTGGCCATGAAGCCGAGGCGGAAGCGTTTGTTCATGAAGCAGTAGATGATGGGGTTGACGCAGGAGGAGGTGTAGGACAG-----GAGGAGGATGAAGGAAATGGGGGTTCCTGAGAGGCGGC----GCTCTGCGGAGGCGGTGTCGTAGGCCCGCCAGGCGTTGGCGCTGAAGATGGGCATCCAGCACAGGAAGAAGAGGACCACGATGACGATGAGCATGCGGATCACCCTTTTCTT chr4 - 94230402 42297278 42297277 42297516 51932887 51932886 51933125 239 AAGGCTGCCTTAAAGCCTCTGCGAAAGTTTTCATTAAAGAAACCATAGATGATGGGGTTGATGCTGCTGTTGAAAAAGGCCAGCCAGTGGGCAAAAGGATAGATATAAATATTGATGATCTGCAGCTGGATATCTGACAGGTTGGCGTAGTCTGAGAGC--ATCATCAGAGTCCACAGTGGA-AGCCAGGACAGGGTGAAAAGCAAAGCCACAATAATGAGCATTTTGATGACTTTTTGTTT ....:x...x.:.....xxx...:...:x..::..x.x...:.x:................:..x.xx.xx.:x:x...x...-----.:.x.::.x..x:..x..:::x:..xx...xxx..:..----xx....xx::.x:..:..x..xx.xxx..--:x.:.::.x.::x.x::...:-.x....x.....:x...:..x.xx:.x.::.::........x:x...x..::...x:.. 83M5I38M4I29M2D21M1D59M 133/230 57.8% 239/94230402 0.0% 12/230 5.2% -15815507 -78414895 +8506 chr4 + 190214555 26483151 26483150 26483300 150 GTTACCTTTAGCAGACTTCTTCTGGCTAGCCTCAAATTTTATTCCCTGGTAGAGTTCCAAAGAGATTAATCCATATGCCACCATCATCACAATTCCAGGAATAAGAAAGAGGATGAGTAACAGGAATGTGTGCCTAATGAAATCAAAAGA chr4 - 94230402 18595549 18595548 18595697 75634706 75634705 75634854 149 GTTACCTCTTGAAGATCTTCTCTGGCTGGTATCAAATTTTATTCCTCTGTAGAGTTCCAATGAAATGAGGCCATACGCAACCATCATTATTATCCCAGGTATAAGAAAGAGTATGAGCAGCAGGAAGGTGTACCTAA-GGAATCAATAGA .......:.x.x...::.::.......:.:x..............::x............x..:..x.:x.....:..x........:.:x..:.....x...........x.....:.:......x....:.....-.:......x... 137M1D12M 117/149 78.5% 149/94230402 0.0% 1/149 0.7% 7887602 NA +16956 chr4 + 190214555 26485629 26485628 26485916 288 AACCTTACCAGGACTGCTGCATAACATCATTTGGCAGTAGAAAGCGGCACATATTCGCGGTCTGGTTGTTATTTTTGGTAAAAGGCACCAAGTTGCTATAAATGGGGTACGGAGTCATGATGGTAAAGGAAAGGCACCAGGTAGCAGCAATCACCTTCAAAGCATGGGATTTTGTCTGCCAGACCCGGGACTGTAAGGGTTTGCAAATCGCACCATATCTCTCTAGAGATATGGCTACCAGATTAAAGGTAGATACACTCACAGAGGTGCCTGGGAAAGGAACAAAGA chr4 - 94230402 18596958 18596957 18597245 75633158 75633157 75633445 288 AGTCTTACCAAGACTGCTGAATGACATCACTTGGCCAAAGGAGCCGACACATGTTGGCTGTGCTGTTGTTGTACTTGGTGAAAGGGACCAGCTTGCTGTAAATTGGATATGGTGACATGATGGTAAAGGAAACACACCAGGTAGCAGCAATCACTTTCAAGGCATGGGATTTTGTCTGCCAGACCCTGGACTGAAGAGGTTTGCAAATGGCACTGTACCGCTCCAAAGAGATGGCAACAAGGTTGAATGTAGACACACTCACAGAGATACCTGCACATAGAAAACAGA .::.......:........x..:......:.....x:x..:.:x..:.....:..x..x..x:x......:.x:.....:.....x....:x.....:.....x..:..:..x.x.................x:....................:.....:.........................x......x.::...........x....::..:.x...:.:...x.....x..x..:..:..x.....:............:.:....x:x.x:...x.x... 288M 225/288 78.1% 288/94230402 0.0% 0/288 0.0% 7888671 NA +16191 chr4 + 190214555 26489210 26489209 26489521 312 AAGAGTCACCAGCAGCAACTTACCCATGAAGTAGGTGGTGGTCTTGCAAACGGCGCTCCCGAAGATGAAATCCTTGAGCAGATTGGGGATGAGGTTGAACGGCATGCAGAAGAGACAGAGCATGAGGTCGCTGACAGCCAGGGAGAGGAGGAAGATGTTGGTGACCGTCCGCATCCGCTTGTTCCGAATCAGCACGGTGATGACCAGCGTGTTTCCCAGCACGCTGAGCAGGAATATCAAGGAGTACAAGAGAATCTGCACCGCTGGCTGCCACTCTGCAGAGAGAAACAGGAGCAAGACGGAGGGATGGAG chr4 - 94230402 18599040 18599039 18599349 75631054 75631053 75631363 310 AAGAGTAAACTTCCAAGACTCACCCATGAAGTAAGTGGCAGTTTTGCAAACAGTGCTTCCAAAAATAAAATCTTTCAGCAGGTTGGGAATGAGGGTGAATGGCATGCAGAAGAGGCAGAGCATTAAGTCACTGACTGCCAGGGACAGCAGAAATGTGTTGGTGACCGTTCTCATCTGTTTGTTTCTTATCAGCACAGTGATGACCAGAACGTTCCCCAAAACGCTGAGCAGAAATATCAAACAATACAGCAGGATCCGGATTATCTGATGCAAATCTGGAAATAGTCACAGAGAGAAATC--AGGTATGAAG ......x.x.xx.x:x:...:............:....::..:........:.:...:..:..:..:.....:..x.....:.....:......x....:..............:........x.:...:.....x........x..x..:..x:.............:.x....:.:.....:.xx........:...........x::...:....:x...........:........:x.:....:x..:...:.x.:::::x.x...x.x....x.:.x..xx....:::x..:x.--...x...:.. 300M2D10M 230/310 74.2% 310/94230402 0.0% 2/310 0.6% 7890170 NA +4979 chr4 + 190214555 26489305 26489304 26489416 112 TGAACGGCATGCAGAAGAGACAGAGCATGAGGTCGCTGACAGCCAGGGAGAGGAGGAAGATGTTGGTGACCGTCCGCATCCGCTTGTTCCGAATCAGCACGGTGATGACCAG chr4 - 94230402 38617632 38617631 38617743 55612660 55612659 55612771 112 TGAAGGGGACGCAGAAGAAGGCGATGAGGAGGTCGCTGAGCGCCAGGGAGCAGATGAAGATGTTGGTGACGGTCCTCATGGCCCTGCTGCGGGTCACCACGTAGAGCACCAG ....x..x.:........::xx..xx.x...........xx.........x:..x...............x....x...xxx.:..:.x..::...x....xx..xx..... 112M 82/112 73.2% 112/94230402 0.0% 0/112 0.0% -12128327 -82102075 +5292 chr4 + 190214555 26492242 26492241 26492705 464 TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTTCCTTTCC------------TTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTTTCTTTCCTTT-------------CTTCCCTCCCTCC---CTCCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCCCTTCCTTC-CTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTTTCTTTCCTTTCTTCCCTCCCTCCCTC-CTTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTTTCTTTCCTTTCTTCCCTCCCTCCCT---CCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTC chr4 - 94230402 69435799 69435798 69436294 24794109 24794108 24794604 496 TCCCATTTACATTCATCCCTTTTTTTTTTTTTTTTTAAACTTCTTCCCCACTAAGCATGTTTTACCCTTCCACAGTCTTAGTATATCTAGCCTCCCTTCTGTACCCATATTAGTTTTTGCTTCTTCCCACTTAATAATGTTGGCCTGCCTACCCTTCAAGCTCCTCTTATTCTTTCTTGTTTCTTTTTAACCCTAATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGGGTCTTACTTCTTTTCTGACTACTTCACCAAGCTTCTGCCTCTCTTC---CCATCTTCTATTTTGGTCCTTTTTATTCCTTTACCAACCCGTATAGGTTGTTATTCCTTGTGCTATTCTGCCATGAGAGCTGCTTGTTCTCCTCTTTTCTGTATCCCCTTTCTTC ...:x::.x.x...x.:....::..::..::..::.xxx:.:.....::x..--x.x.x::..x..:....------------.x...xx.........:x:x:::x.x.:xx.:.:.x:.....:..x:.-------------..x..:x....:.---.....:.:x..:.:....x:..::...:xx:.:.xx..x:..xx.x:....::..x.:x..-:..:.:xx..x.:.:.:.x.x.:...::..x.x:....:.:x.:..:..:.:...xxx..:.:..:x.:.::.:....-..:.x.....::..::.:.x.......x.xx.xxx.:..x....:..:..xx..x.:.:x.:xxx:.:..x...::....---..x..:.:.x:...xx...:.:::x.:.:::.x:.xx:.:x.x.xxx..x:.x.:.:..x.x.:x.:.:x..x.---xx:.x...x.....:.::.....x.x..:.:..::... 52M2I17M12I48M13I13M3I61M1I78M1I80M3D74M3I38M 255/461 55.3% 496/94230402 0.0% 38/461 8.2% -42943557 -51286845 +3017 chr4 + 190214555 26492293 26492292 26492341 49 TTCCTTCCTTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCT chr4 - 94230402 53815610 53815609 53815658 40414745 40414744 40414793 49 TTTCTTCCTCTCCCCTCCTTTCTTTCCCCCCCCCCTTTTTTTTTCCTTT ..:......:...::.........:..:...::...::...:..:..:. 49M 36/49 73.5% 49/94230402 0.0% 0/49 0.0% -27323317 -66907085 +7053 chr4 + 190214555 26492478 26492477 26492720 243 CTCTCTTTCTTTCCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCTTTC-TTTCTCTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTCCTTTCTTTCTCTCTCTCTTTCTTTCCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCT chr4 - 94230402 19234661 19234660 19234888 74995515 74995514 74995742 228 CCTTCTCACTTCCCTCTttctccttcctctctcct--cttctactttcacttttctgctttctcctctcttcttctccctcctttctctctcttctccacttctccctgc--tcctttctt--ttccctttcttcccttTATCTAAACTGAAAGTCTCT---TCTTTCTATCC-------CTCCCCTCCCCCCCTTTTTTTTCTCATTTGTTTTTATTCACTACTTATATCCCTTATTGTTCCT .::...:x...:...:.:.::...:....:.....--...:.x.....-:..:...x:..::.:..:....:.:..:...:.:...::..::.:..:.x:.:..:...x.--.....:...--..:............::x.::xxx..xxxxx.....---.......x...-------.::.......:..:..:........x..:x..:..x:..x..x::.x.x.::...x:.x..... 35M2D11M1I61M2D9M2D36M3D11M7D64M 152/227 67.0% 228/94230402 0.0% 17/227 7.5% 7257817 NA +3040 chr4 + 190214555 26492544 26492543 26492621 78 TCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCC chr4 - 94230402 93005115 93005114 93005192 1225211 1225210 1225288 78 TCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCTC ..x........:..:x........:x.xx:.x:.:...::..:..x......:x.....x..:..xx:....::.::. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% -66512571 -27717831 +4109 chr4 + 190214555 26492646 26492645 26492828 183 TTCCTTTCTTCCCTCCCTCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTTCCTTTCTTCCCTCCCTTCCTC-CTTTCTTTCTCTCTCTCTTTCTTTCCTTTCTTCCCTCCATCCCTCCTTTCTTTTTCTCTTTCTTTCTTTCTTT chr4 - 94230402 45185586 45185585 45185750 49044653 49044652 49044817 165 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT-------TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACT------CTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCT------TTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..:x:..:..::.:...:xx::.:xx......x:...x........-------........x..:..:x....:....:...:..xx..------.:......:...-...xx.x::....x..x:..x.:.------...:xx...:....xx.:....x....:..:::..:xx..... 49M7D36M6D12M1I24M6D43M 109/164 66.5% 165/94230402 0.0% 20/164 12.2% -18692940 -75537462 +4909 chr4 + 190214555 26492804 26492803 26492926 123 TCTTTTTCTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCATCCATCCTTCC---TTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTTTTTTTTTTTCT chr4 - 94230402 54286407 54286406 54286532 39943871 39943870 39943996 126 TCTTTTCCTCTTTCATTCTTCTCTACTCTCATTTTCTCTCTTTATGCTCTTCTTTCTCCCTGCTTGCTAtcttctcttattctttcttctcctctttcttctctcccttccctctttgcttattct ......:.......x.....:::.x.....x..:.:...:.:.x.x:.:.:...:..:...x.:xx.:...:.::.---...:...:.::.:..........:..::.::::.:...x:..x.... 76M3I47M 81/123 65.9% 126/94230402 0.0% 3/123 2.4% -27793603 -66436799 +3113 chr4 + 190214555 26492873 26492872 26492949 77 TCCTTCCTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTTTTTTTTTTTCTGAGACGAAGTCTTGCTCTGTTGC chr4 - 94230402 54255911 54255910 54255987 39974416 39974415 39974492 77 TCTTTTCTTTATTCCTTCCTCTTTTCTTCTTTCTTTATTTTACTGTCAAGCCCCAAGTTACAGTTTTGCTTTTCTGC ..:..:...:x.........::..............x....x:.x.:xxx::.::..x::x...:.....:.x:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -27763038 -66467364 +3350 chr4 + 190214555 26498546 26498545 26498617 72 CTGCAACCTCCACCTCCTAGGTTCAAGCAATTGTCCTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:..:........::x..xx.xx.x........::.:...........:....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 8301420 NA +3103 chr4 + 190214555 26512985 26512984 26513054 70 TTTAAAAAAGTTTATATATATATATATATATATATATTTATCTACATATAATAATTTTACATATTTATAG chr4 - 94230402 43936358 43936357 43936427 50293976 50293975 50294045 70 TTTAAAAATATCTATAAATACCTATATTTATATAGATTTATATGCCTATAAATACCTAAAATACCTATAG ........x:.:....x...:x.....x......x......x.:.x.....xx.::.x.x...::..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -17423373 -76807029 +3081 chr4 + 190214555 26526649 26526648 26526732 84 CCTTCTTAAAAAAAAAAAATAATATATATATATACACATATATATATACATATATATATATACACATATATATATACATATATA chr4 - 94230402 16272548 16272547 16272631 77957772 77957771 77957855 84 CCTACTGAAAAAAAAAAAAAAACATCTTGTTATATATAATACTTTACATACATATATATAAACACATACATAAAAATAAGCATA ...x..x............x..:..x.xxx....:.:.xxxx.x..:.:.:.........x.......:...x.x.:.x::... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 10254101 NA +3719 chr4 + 190214555 26526767 26526766 26526870 104 TATATATACATATATATATATATATACACA----TATATATACATATATATATACATATATATATACATATATATATATATATACACACACATATATATATACGTATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..:.....x:...:.:.........----:..:x:......::....x::.:.::x:....::.:x:..:.....x....:.x....x.x.:.:.:.:..... 30M4I74M 67/104 64.4% 108/94230402 0.0% 4/104 3.8% -46594335 -47636067 +3134 chr4 + 190214555 26526822 26526821 26526889 68 ATATATACATATATATATATATATACACACACATATATATATACGTATATATATATATACACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x.:::...:.x..:...........:...:....:.x..:....:x..:::.::...:.x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 18930409 NA +3146 chr4 + 190214555 26526834 26526833 26526897 64 ATATATATATATACACACACATATATATATACGTATATATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x.:.:.:...:..::.x..::x.:....x.....::........... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 9006085 NA +3630 chr4 + 190214555 26530822 26530821 26530904 83 CTGCAGCCTCAACTTCTCAGGCTCAGATGATTCTCCCACCTCAGCCTCCCAAGTAGCTGGAACTACAGGCATGTACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..x:.::::..:...::..x...x.xx:x........::..................--.:..:.....::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 8333696 NA +3156 chr4 + 190214555 26584421 26584420 26584474 54 ACAGACAAAAACAAAAACAAAAACAAAAACAAAAACAAAACAAAACAAAAAAAC chr4 - 94230402 36076683 36076682 36076736 58153667 58153666 58153720 54 ACAGACAGGAAATTAAACCAGAAGAAAAACAAAAACCAAACAAAACAAATAAAC .......::..xxx....x.:..x............x............x.... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -9492262 -84738140 +3076 chr4 + 190214555 26584444 26584443 26584498 55 CAAAAACAAAAACAAAACAAAACAAAAAAACC--CCACCTCCCTGTCC--GGTGCAAGC chr4 - 94230402 73067603 73067602 73067661 21162742 21162741 21162800 59 CAAAAACAAAAACAAAACAAAACAAAAAAACCCACCACTCTCTTATGCTAGATGAAAGC ................................--....:::.:.:.x.--.:..x.... 32M2I14M2I9M 47/55 85.5% 59/94230402 0.0% 4/55 7.3% -46483159 -47747243 +5129 chr4 + 190214555 26613138 26613137 26613249 112 CTTTCTTTTTTATTATTATTATTATTC--TTAGGCCAGTCTTCAGAGACCTGAGATTAAACTTGAATCACTGAAAGAAGATATTAAGGAATTCTTTAAAATATCAGGTTTGTAA chr4 - 94230402 18633635 18633634 18633748 75596655 75596654 75596768 114 CTCATTTATTTATTCTTTTTTTTTTCACATTAGATTAGCCTACACAACCCAGAAATTAAACTGGAATCACTAAAAGAAGATATCAAGGATTTTCTGAAGACATCAGGTTTGTAA ..:x:..x......x..x..x..x.:x--....:::..:..x..x.:x..x..:........x........:...........:.....x..::.x..:.:............. 27M2I85M 83/112 74.1% 114/94230402 0.0% 2/112 1.8% 7979503 NA +5457 chr4 + 190214555 26614384 26614383 26614503 120 TTTTATTCTTTTTTTAAAA---AACAGGTTGGGAGAAGAAACTTCAGAATGCTGTTTATAGTGAACTGAGTGTGTGAGTTTTCCCACCTATTTTACAATAGTATTTTGTTTAGCTATATTTAC chr4 - 94230402 18634445 18634444 18634558 75595845 75595844 75595958 114 TTTTGTTTTGTTTTTTAATTTTAACAGGTTGGGAAAAGAAGCTTCAGAATGCTGTTTATAGTGAACTCAATGTGTAAGTTT---------ATTTAGTGTGTTAATTTATTAAGTTCTATTTGC ....:..:.x.....x..x---............:.....:..........................x.:.....:.....---------x....xx:.:x..x...:..x..:.x.....:. 19M3I59M9D33M 89/111 80.2% 114/94230402 0.0% 12/111 10.8% 7979939 NA +6595 chr4 + 190214555 26620554 26620553 26620709 156 AAGTAATATCTAACCAAGAGAATAATGTGTG-ATATTTAGCTGCCTCTTTTTGCTCCTAGGTTTCCTTTACCTAGTCATCCTGCTGCACCTCCTGAACATCTTAAAGAACCTTTGGTATACATGAGGAAAGCACAGGTTGGCTATTGTTCAATTTCA chr4 - 94230402 18635329 18635328 18635481 75594922 75594921 75595074 153 AAATAATA---AAGCAAAATAAAAATATGAGCATTTAAAGTATACTGTACTTTCTTCAAGGTTTCCTTCACCATGTCATCCTGCAGCACCTCCTGAGCATATGAAAGAACCATTGGCTTATATGAGGAAAGCACAGGTTGGTTGTTA-CCAATTTTA ..:.....---..x...:.x..x...:..x.-..x.xx..:xxx..x.x:..x..:.x..........:...xx..........x...........:...x.x........x....:x..:....................:.:..:-:......:. 8M3D20M1I115M1D9M 116/152 76.3% 153/94230402 0.0% 5/152 3.3% 7985225 NA +6090 chr4 + 190214555 26637175 26637174 26637308 134 ACTGGAAAAGATAATTGATT------------GTTTTTTATGT----TTCAGGGAAGTTGGGAAAAAAGAATTTTGAAGAGTTTAAATAGTATGTGCACTGAACTGAGTATCCCACTGGCACGAAAGGTACTTT-TAAACATTTTTCTGTT chr4 - 94230402 18642999 18642998 18643149 75587254 75587253 75587404 151 ATTGGAGaaaaaaataaattttacataatttaattttttatGTGCATTTCAGGGAAGCTGGGAGAAGCGAATTCTAAAAAGTCTCAATAGTATGTGCACAGAACTCAGTATCCCTCTAGCACAGAAGGTAATGTATTACAAACTTTCTGTT .:....:..:.x...x:...------------:..........----..........:.....:..:x.....:.:..:...:.x..............x.....x........x..:....::......x.x.-.x.xx.x:........ 20M12I11M4I87M1I16M 105/134 78.4% 151/94230402 0.0% 17/134 12.7% 7994176 NA +5644 chr4 + 190214555 26638661 26638660 26638837 177 TGTTATGGTCATTTATTTAGCTTTTAAATAAGTTATTGATTCTTGTTTTTAGTTGTATTGCTAGACTTCAAAAAATGAAATGAAACCAGTTTCAAAATTACCTTTTCCAGAGGCCAGTTGGAGAACAGAAAGAACTTCTTAATAAATGGAATGAAATGGGAACTGATGAACCAGGTA chr4 - 94230402 18644180 18644179 18644331 75586072 75586071 75586223 152 TGTAATATTCACTTACATA--TTTGAAATAGG---------CATGCTTTTAGTAGTTCTGTTA--------AAAAAGAAG---AGTTCTTTTCTTGGTGACTTT---CAGAGGCCTGCAAGTGAGCAGAAAGAGCTGCTTAATAAATGGAATGAAATGGGAACTGATGAACCAGGTA ...x..:x...:...:x..--...x.....:.---------.x..:.......x..x:..:..--------....x...:---.:::xx....xx::.x..:..---........x.:x:.x..:........:..x........................................ 19M2D11M9D22M8D9M3D21M3D70M 117/152 77.0% 152/94230402 0.0% 25/152 16.4% 7994481 NA +4897 chr4 + 190214555 26640129 26640128 26640192 64 ATCTTATTCTAGATTTAAGCCTTTTCAGACCTGTTTATGCACCTAAGGATTTTCTTGAGGTAGG chr4 - 94230402 18645220 18645219 18645283 75585120 75585119 75585183 64 ATCTCATTTCAGATCTAAGTCTCTTCAGGCCTGTTTATGCACCTAAAGATTTTCTTGAGGTAAG ....:...::....:....:..:.....:.................:...............:. 64M 55/64 85.9% 64/94230402 0.0% 0/64 0.0% 7994909 NA +3251 chr4 + 190214555 26656647 26656646 26656707 61 CTCCCGGGTTAAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGGAGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.....x...::x...x.xx.x........::.:................x.x.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 8459508 NA +8089 chr4 + 190214555 26659589 26659588 26659716 128 TTTTAAAGGTATTAATTAATCTTCGCAACCCAAATTATGAAAACGGTGATTCTCTTAGTTTCAGGACTCATTTGGGTTTAATTCAAGTTCCACTGAAAGTAAAAGACATCCCTGAATTGGTAAGTATA chr4 - 94230402 18648407 18648406 18648534 75581869 75581868 75581996 128 TTTTTAAGGTACTGATGAATCTTCGAAACCCAAATTATGAAAATGGAGAACAGCTTAGTTTCAGAAATCATCTGGGGCTAATTCAGGTTCCTCTAAAAGTTAAAGATATTCCAGAATTGGTAAGTATA ....x......:.:..x........x.................:..x..x:xx...........:.x....:....x:.......:.....x..:.....x.....:..:..x............... 128M 105/128 82.0% 128/94230402 0.0% 0/128 0.0% 8011182 NA +5860 chr4 + 190214555 26666320 26666319 26666410 91 TGTTATTTTTCAGAAAGAATGCTTTGTGGAACTTGGCTTAAATATAGGACAACTGGGTATAGATGATTCTACACAAGTGCCTCCTGGTTAG chr4 - 94230402 18651904 18651903 18651994 75578409 75578408 75578499 91 TGTTTCTTTTCAGAAAGAAGACTTCAGTGAGCTAGACTTAAACGTAGGACAGCTGGGTATTGATGATTCAGCACAAGTGCCTCCTGGTTAG ....x:.............x:...::xx..:..x.:......::.......:........x........x:.................... 91M 74/91 81.3% 91/94230402 0.0% 0/91 0.0% 8014416 NA +5860 chr4 + 190214555 26666320 26666319 26666410 91 TGTTATTTTTCAGAAAGAATGCTTTGTGGAACTTGGCTTAAATATAGGACAACTGGGTATAGATGATTCTACACAAGTGCCTCCTGGTTAG chr4 - 94230402 18649745 18649744 18649835 75580568 75580567 75580658 91 TGTTTCTTTTCAGAAAGAAGACTTCAGTGAGCTAGACTTAAACGTAGGACAGCTGGGTATTGATGATTCAGCACAAGTGCCTCCTGGTTAG ....x:.............x:...::xx..:..x.:......::.......:........x........x:.................... 91M 74/91 81.3% 91/94230402 0.0% 0/91 0.0% 8016575 NA +8695 chr4 + 190214555 26672069 26672068 26672591 523 AGAAAAATGTATCTAATGTTGTTCTAAATGTGATTGCTCATACTCATGTCTAATAATTTTAATT---------TTTTTTTAATTTTTAGAACTTTTTGAAAATGAACATGTACGTATTGGGCAAAAAGGTAAGCTTTTAATTATAAATGTTATTATTTCTGAAAAGTGAGACAGTCCCAGCTAAATGTC---------TGCCTCAGATAACCTCCAGGTGAAATTTAATCTCTGAAAAGTGAA-------AAACCTAAAGAGGGGTAATATTTAACCATGTAGATTACATAATGAGAATCTTTATAAGTAGGGAAAATGCATCATTTTGGCTTTGTCAATAAATGTCAGAGAAAGAAGTACACAGCTGGTTCACTAAAA------AGGAAATGCAGACACATATTCCTCAGGGATGTTAGCTTAATCCATTCGGCAGTAGAATTTCATTTTAAAATCAAAGAGGCAGGTTCTG---TCTTTGATGCACCCACACACCTCTCATTAGAGTTAATGGGAATATGCTCCCGCATCAGGAGAAAATATAACTGTAATGGTT chr4 - 94230402 18652615 18652614 18653113 75577290 75577289 75577788 499 AGAAAAATATAG--AATATTGTACTC-------TCTTTTTTTCTCTTATCTAATATTTGCAGTTCATCTCTATTTCTTCTGTTTTCTAGAGTTCTTTGAAAATGAGCATGTACGTATTGGACAAAAAGGTAGGCATCTATTTCCATCTGTAAAATAAACAAAAAACTGAG-TAGTAACAAATATATCTCGTAATTTTATATCTCAGACGCCTT-----TGGAATTT------TGACAAATTAGGCAGACTAGAACAAAACATAGTCAATA-ATAACATTGTAATTTAGACA------------------AGGAAAAAGGAAGCATTGCAG-TCTACCAGTAGCTATCAGATAAATAGTTCCACAGATATTTCATTAAAATTAAATAGGAAGCATAGATGCACAGCTTTTTGG--TGGTAACTTAGGTCACT-----GCTGAATTTCATTTTAAAATCAAA-----AGATTCTGGACTCCTTTCCCTGCATACACAGTTCTTATTAGTGTAATGGGTTTTATG--TCTGCATCAGAAAAGAATAT---CTTAATGGTT ........:..x--...:....x..x-------.:x:.:x.x...x.:.......x..x:.:..---------..:..:.:x...:....::.:...........:..............:..........:..x.:..x..x:.xx...x.xxxxxx.x:....x....-:...xx..:x..x..x..---------.::......::x.:.-----..:.....------...x..:.x.:-------.:.x.x...x.x:.x:....-x....xx....:x...x.:.------------------...:....x.x.x....x::.-.:.::..:..:x.:.....x...x.:x.x.....x.:x....:.....------.....::::...::..:.x:::.:x..--..x..:....:x:..:.-----.:x.....................-----..:.....---..:..xx:x::.x:.....x:...:.....x..x.xx..xxx....--:.:.......:.:.:.....---:x........ 12M2D12M7D31M9I97M1D18M9I15M5D8M6D11M7I20M1D20M18D21M1D48M6I27M2D17M5D24M5D8M3I46M2D20M3D10M 316/465 68.0% 499/94230402 0.0% 92/465 19.8% 8019454 NA +8553 chr4 + 190214555 26672069 26672068 26672591 523 AGAAAAATGTATCTAATGTTGTTCTAAATGTGATTGCTCATACTCATGTCTAATAATTTTAATT---------TTTTTTTAATTTTTAGAACTTTTTGAAAATGAACATGTACGTATTGGGCAAAAAGGTAAGCTTTTAATTATAAATGTTATTATTTCTGAAAAGTGAGACAGTCCCAGCTAAATGTC---------TGCCTCAGATAACCTCCAGGTGAAATTTAATCTCTGAAAAGTGAA-------AAACCTAAAGAGGGGTAATATTTAACCATGTAGATTACATAATGAGAATCTTTATAAGTAGGGAAAATGCATCATTTTGGCTTTGTCAATAAATGTCAGAGAAAGAAGTACACAGCTGGTTCACTAAAA------AGGAAATGCAGACACATATTCCTCAGGGATGTTAGCTTAATCCATTCGGCAGTAGAATTTCATTTTAAAATCAAAGAGGCAGGTTCTG---TCTTTGATGCACCCACACACCTCTCATTAGAGTTAATGGGAATATGCTCCCGCATCAGGAGAAAATATAACTGTAATGGTT chr4 - 94230402 18650798 18650797 18651296 75579107 75579106 75579605 499 AGAAAAATATAG--AATATTGTACTC-------TCTTTTTTTCTCTTATCTAATATTTGCAGTTCATCTCTATTTCTTCTGTTTTCTAGAGTTCTTTGAAAATGAGCATGTACGTATTGGACAAAAAGGTAGGCATCTATTTCCATCTGTAAAATAAACAAAAAACTGAG-TAGTAACAAATATATCTCGTAATTTTATATCTCAGACGCCTT-----TAGAATTT------TGACAAATTAGGCAGACTAGAACAAAACATAGTCAATA-ATAACATTGTAATTTAGACA------------------AGGAAAAAGGAAGCATTGCAG-TCTACCAGTAGCTATCAGATAAATAGTTCCACAGATATTTCATTAAAATTATTTAGGAAGCATAAATGCACAGCTTTTTGG--TGGTAACTTAGGTCACT-----GCTGAATTTCATTTTAAAATCAAA-----AGATTCTGGACTCCTTTCCCTGCATACACAGTTCTTATTAGTG-TAATGGG-TTTTACGTCTGCATCAGAAAAGAATAT---CTTAATGGTT ........:..x--...:....x..x-------.:x:.:x.x...x.:.......x..x:.:..---------..:..:.:x...:....::.:...........:..............:..........:..x.:..x..x:.xx...x.xxxxxx.x:....x....-:...xx..:x..x..x..---------.::......::x.:.-----.::.....------...x..:.x.:-------.:.x.x...x.x:.x:....-x....xx....:x...x.:.------------------...:....x.x.x....x::.-.:.::..:..:x.:.....x...x.:x.x.....x.:x....:.....------.....::::.:.::..:.x:::.:x..--..x..:....:x:..:.-----.:x.....................-----..:.....---..:..xx:x::.x:.....x:...:.....x.-.......-x.x.:.x:.:.......:.:.:.....---:x........ 12M2D12M7D31M9I97M1D18M9I15M5D8M6D11M7I20M1D20M18D21M1D48M6I27M2D17M5D24M5D8M3I32M1D7M1D27M3D10M 316/465 68.0% 499/94230402 0.0% 92/465 19.8% 8021271 NA +3158 chr4 + 190214555 26673413 26673412 26673474 62 AAAAATTATTTCATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964823 14964822 14964884 79265519 79265518 79265580 62 AAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..xx..x.:.:.::.:.::.:...:........xx........::............. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 11708590 NA +7947 chr4 + 190214555 26673765 26673764 26673900 136 ACTTTTGATAGTTCTAGCAGAACAAGATAGTGCTGCTGCTCAACAGTACATCAGACAAGGAAGTCCCACGGCACTGAGAGCTGAATTGTGGGCTCTCATTTTGAATATTTCCAGCCAACCTGAGGTAAGAAGAAAA chr4 - 94230402 18655614 18655613 18655749 75574654 75574653 75574789 136 ATTTTTTTCAGTTTTAGCAGAACAAGATAGTGCTGCAGCTCAACAATATGTTCGTCAGGGATGTCCAACAGCACTCCGAGCTGATCTATGGGCCCTCATTCTGAATATTTCTAATCAGCCAGAGGTAAGGGGCAAA .:....xx:....:......................x........:..::.:x.x..:...x....x..:.....xx.......x:.:.....:......:..........:.::..:..x........::.x... 136M 105/136 77.2% 136/94230402 0.0% 0/136 0.0% 8018151 NA +6963 chr4 + 190214555 26683660 26683659 26683757 98 TACTTTTAAATTTAGGATGTCTTGTATTATGAGCAGCTTAAGACCAATGTGATACAACATGACCTTTTGGTGGACAGTCTAATCTATAAAGTAAGTAA chr4 - 94230402 18668316 18668315 18668413 75561990 75561989 75562087 98 TATTTTCAATTTTAGGATATTTTGTATTACGAGCAGCTTAAGTCAAATGTGATCCAGCATGACCTTTTAGTGGACAGCCTGATTTACAAAGTAAGTAA ..:...:..x........:.:........:............x.x........x..:...........:........:..:..:..:........... 98M 83/98 84.7% 98/94230402 0.0% 0/98 0.0% 8015344 NA +6007 chr4 + 190214555 26688333 26688332 26688413 81 TTTTAATTATAGGATGTGAAGTTGACAGCAAGCAATGATGATTATTATTTTGTATTTGAAGATTATTTATATCAGGTAAGT chr4 - 94230402 18671840 18671839 18671920 75558483 75558482 75558563 81 TTTTTATTTCAGGATGTAAAGCTAACAGCAAGCAATGATGACTACTATTTTGTATTTGAGGATTATTTGTATCAGGTAGGT ....x...x:.......:...:.:.................:..:..............:........:.........:.. 81M 70/81 86.4% 81/94230402 0.0% 0/81 0.0% 8016493 NA +6007 chr4 + 190214555 26688333 26688332 26688413 81 TTTTAATTATAGGATGTGAAGTTGACAGCAAGCAATGATGATTATTATTTTGTATTTGAAGATTATTTATATCAGGTAAGT chr4 - 94230402 18668894 18668893 18668974 75561429 75561428 75561509 81 TTTTTATTTCAGGATGTAAAGCTAACAGCAAGCAATGATGACTACTATTTTGTATTTGAGGATTATTTGTATCAGGTAGGT ....x...x:.......:...:.:.................:..:..............:........:.........:.. 81M 70/81 86.4% 81/94230402 0.0% 0/81 0.0% 8019439 NA +3059 chr4 + 190214555 26705827 26705826 26705909 83 CTCACAGAAT--GAATTAAGAAGTGTTTTCTATTTTTTAATTGTGTGGGAAAGTTTTTGTTTTGTTTTGTTTTGTTTGTTTGTTT chr4 - 94230402 47430019 47430018 47430099 46800304 46800303 46800384 81 CTCACAGGACTGAGAACAAGAA----TATCTATTTGATTATTGCTTGTTGAGGTTTTTTTTTGGTTTTTTTTTGTTTGTTTGTTT .......:.:--::.x:.....----.x.......xx.x....:x..xx:.:......x...x.....x................ 10M2I10M4D59M 60/79 75.9% 81/94230402 0.0% 6/79 7.6% -20724192 -73506210 +6245 chr4 + 190214555 26717896 26717895 26718021 126 TGCTTAATTGCTA------TTTTTTTTCCAATGTTATATTC---AGGTATTACTTTGTTTTTCCCGGGATACATCTGTGTTGAGTCACTTTGCATTCAACAGTGCCTCGCCACCAAAATCATACATAAGAGGTAA chr4 - 94230402 18676188 18676187 18676322 75554081 75554080 75554215 135 TGATTGATTGTCAGCTGATTTTTTTTTTTTATGCTGTCTTCTACAGGTATTACTCTGTTTTTCCCGAGATACTTCAGTATTGGAGCACTTTGCTTACAGCAGTGCTACTCCACCTAAGTCGTACATACGAGGTAA ..x..:....::.------........::x...:.:.x...---..........:...........:.....x..x..:...::x........x.x..:......:x.x.....x..:..:......x....... 13M6I22M3I91M 98/126 77.8% 135/94230402 0.0% 9/126 7.1% 8041708 NA +6245 chr4 + 190214555 26717896 26717895 26718021 126 TGCTTAATTGCTA------TTTTTTTTCCAATGTTATATTC---AGGTATTACTTTGTTTTTCCCGGGATACATCTGTGTTGAGTCACTTTGCATTCAACAGTGCCTCGCCACCAAAATCATACATAAGAGGTAA chr4 - 94230402 18674592 18674591 18674726 75555677 75555676 75555811 135 TGATTGATTGTCAGCTGATTTTTTTTTTTTATGCTGTCTTCTACAGGTATTACTCTGTTTTTCCCGAGATACTTCAGTATTGGAGCACTTTGCTTACAGCAGTGCTACTCCACCTAAGTCGTACATACGAGGTAA ..x..:....::.------........::x...:.:.x...---..........:...........:.....x..x..:...::x........x.x..:......:x.x.....x..:..:......x....... 13M6I22M3I91M 98/126 77.8% 135/94230402 0.0% 9/126 7.1% 8043304 NA +6702 chr4 + 190214555 26720075 26720074 26720210 136 TTATAGGAAAACTAGGACTGGAAGAATATGCTGTCTTTTACCCACCAAATGGTAAGAGTAATGCTATTGCTTCCTCTAGTGGGAAGTGAAAAAATTACA----ACTTTTATAATCAAA-ATGTGACTTTCTTATTCTCTTT chr4 - 94230402 18678610 18678609 18678750 75551653 75551652 75551793 141 TCACAGGAAAACTGGGAATAGAAGAATATGCTGTTTTCTATCCACCAAACGGTAAGAATGATGCTATTGCCTCCTCTAGTGGTAGCTTGGAAAGGTACAGGAGATGTTTTTCCTCAAATACGTTAACCTCTTTTTCTATTT .:.:.........:...x.:..............:..:..:........:.......:.:..........:...........x.:x.x::...:x....----.:x...x.xx.....-.:..x.x::....x....x... 99M4I15M1I22M 104/136 76.5% 141/94230402 0.0% 5/136 3.7% 8041465 NA +4100 chr4 + 190214555 26725487 26725486 26725560 74 CTGCAGCCTCGACCTCCTGGGCTTAAGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.:.....x.:.x.xx:x........::..................x...... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 8528361 NA +3165 chr4 + 190214555 26734871 26734870 26734987 117 TGTGTGTATATGTATACGTATGTGTGTGTATATATACACACATGTGTACATACACATATATGTGTGTATATATGTATACA----CATATGTATATGTATATATG----TATACACATATGTATAT chr4 - 94230402 68323944 68323943 68324068 25906335 25906334 25906459 125 TGCGTAGTTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTAAAGAAAACCAGAGGTATTTTTGGTTATGGGAATATTCATGTTTGAATAT ..:..:xx........x.:......x.:.....:x.:.x.x:....:..:.x:....:....::x::.x.......x.x.----..x.x....x.x.:xx....----...x..::.x..x.... 80M4I20M4I17M 78/117 66.7% 125/94230402 0.0% 8/117 6.8% -41589073 -52641329 +3348 chr4 + 190214555 26734935 26734934 26735055 121 TGTATATATGTATACACATATGTATATGTATATATGTATACACATATGTATATGTATATATGTATACACATATGTATATGTGTATACACATGTATATATGTATATGTGTACACACATGTAT chr4 - 94230402 17853432 17853431 17853545 76376858 76376857 76376971 114 TGTAAACAAGCACACAGAGAGGCACATTT-------TCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCAT ....x.:.x.:.:...x.x.x.:.:..x.-------.x.x:.:x.:.x......:.:.............x:.:xx.x...:.::.:........x.x..:......:x.x.x::...:.. 29M7D85M 74/114 64.9% 114/94230402 0.0% 7/114 6.1% 8881503 NA +3182 chr4 + 190214555 26735028 26735027 26735108 81 ATATATGTATATGTGTACACACATGTATATATGTATATATGTATACAC--ATGTATATATGTATACACATGTATATATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.....:....:.:.x........x..::...:....:x....:--..::.:.:.:::.:.....x::.:.x...x... 48M2I33M 54/81 66.7% 83/94230402 0.0% 2/81 2.5% 18339240 NA +3505 chr4 + 190214555 26735051 26735050 26735128 78 TGTATATATGTATATATGTATACACATGTATATATGTATACACATGTATATATGTATATATGTATACACATGTGTGTG chr4 - 94230402 17853469 17853468 17853546 76376857 76376856 76376934 78 TGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG ...x......:.:.............x...xx.x.....:..:.::.:...x.x.::.......x.x.x:.:..::.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 8881582 NA +3395 chr4 + 190214555 26735099 26735098 26735169 71 TATATGTATATATGTATACACATGTGTGTGTATATTTGTATACACATATGTGTGTATGTGTATATGTATGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::..:..::..:..:.....::x:.:.::......x.:..::...:...x..:.....x......:... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -44895036 -49335366 +4176 chr4 + 190214555 26735430 26735429 26735499 70 AAAAGAAATACCTTTTTTTTTTTAGGTGTTATCCCTTTTCATGGATTTTCAATGTATGGTAAGTTGGGCT chr4 - 94230402 18679933 18679932 18679999 75550404 75550403 75550470 67 AAAAGAAATA---TTTGTTTTTTAGGTGTAATCCCATTTCATGGCTTTTCTATGTATGGTAAGTGTGACT ..........---...x............x.....x........x.....x.............xx.:.. 10M3D57M 59/67 88.1% 67/94230402 0.0% 3/67 4.5% 8055497 NA +12218 chr4 + 190214555 26739820 26739819 26739989 170 TTTCAGTAGTTCTGCAGTATTATA--AATTA-----ATTTTTTTCTTTCAGTTGCACCACTTTGTTTTCTATACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGACTCCATTCCATCTCTTCTCATCCTTCTGTAAGTTCATAAGAAA chr4 - 94230402 18681603 18681602 18681778 75548625 75548624 75548800 176 TTTTAGCAGTT-TACAATGTTGTGTCAATTATACTTCTTTTATCCTTTCAGTTGCTCCACTTTGTTTTCTGTACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGACTCCATTCCATCTCTTCTCATCCCTCTGTAAGTTCATTAGGAA ...:..:....-.:..:.:..:.:--.....-----x....x.:...........x..............:......................................................................................:.............x..:.. 11M1D12M2I5M5I141M 154/169 91.1% 176/94230402 0.0% 8/169 4.7% 8058217 NA +7489 chr4 + 190214555 26742506 26742505 26742615 110 AGGGTATTGTGTCACTCTGTCTGCTGTTTGAAACTCTTCTTCAAACTTATCTTCCCCAACTCTTTTATCATCTACGAGAAATTGGGGCTCAACCGTGAGTACTTTTCTCT chr4 - 94230402 18682905 18682904 18683014 75547389 75547388 75547498 110 AGGGCATTGTGTCATTGTGTTTGCTATTTGAGACTCTTCTACAAACTCATCTGCCTCAGCTCTTTTATCACCTTCGAGAAATTGGGGCTCAGCCGTAAGTACATCTTACT ....:.........:.x...:....:.....:........x......:....x..:..:...........:..x.................:....:.....x.:.:x.. 110M 91/110 82.7% 110/94230402 0.0% 0/110 0.0% 8059601 NA +9601 chr4 + 190214555 26748400 26748399 26748560 161 CTTGCTTATAGACTTCGCATATCATTTAAGTGGATGGTTCGAGCTTTCTCTGGATACTTAGCTACAGATCAGCTCTTGCTTTTATGGGATAGAATCCTAGGATACAACTCTCTGGAAATTCTTGCTGGTAAGAGTAAATGCTTGTTTGTAGAACACATGCT chr4 - 94230402 18683611 18683610 18683766 75546637 75546636 75546792 156 CTTGTTTGCAGACTACGAATTTCATTTAAATGGATGGTACGAGCATTTTCTGGTTATTTAGCTACAGATCAGCTCTTGCTCCTTTGGGACAGAATCCTAGGGTACAACTCCCTAGAAATTCTTGCTGGTAAGGGAA-----TTATTTTTACAAACTATGTT ....:..::.....x..x..x........:........x.....x..:.....x..:.......................::.x.....:...........:........:..:..................:.x.-----..:...x..x..xx:...:. 136M5D20M 128/156 82.1% 156/94230402 0.0% 5/156 3.2% 8064789 NA +22539 chr4 + 190214555 26753775 26753774 26755151 1377 CTGATGAGTAGGCCAGCAGTTGAAGTAGTG-------------TGCATTCTTTTCCAGTGCTGGCAGCTGCCGTGTTTGCTTTCCGAGCAGTGAACCTGATGGAGGTGACATCACTGGCTGCAGCTGAAGTAAGGATAAGTTTCACTCAGATGGGATGGAAATAGTTTCTGAGAGATTGCCAG--GCTGTCATTTTAGTGTC----------TGTTGCATAGGACACGCGTTACTTGTAGCCAGGTTTTTTAACTCGGGTAAAACCT-GTTAAGTTCTGAGCTAATAATACTTAAGGATTCAAATTTCTTTAATTACTTGAGAAAAGTCTTCTTATGAAGGAGTAATAAACAAGATTATTATAGGAAACCATTATAACCATATGGGAAACCAGATACCTGGTAATTTTAATGGAAACAATTGGGGTTTATGTTGCATTTTTTTATC-------GTTCATGTCCATGCATTATTTTCACAGAAGAAAAACCACTTGAGAGAATTAAAGAGCATGTATTTGGATGATATAGTGAAGATACATGGGCTTTTTTGGTTATTTTAAATTGT-----GAGTTAATTAT-------TTAAAGCTG---ATTTCTTTTCAGTGGTATAAT-TTATACCTGAAATATGG-----------TTCAATTAAATAGTGTTTACTGTATTATTCTATTTGTTATCTTTCACAGAAATATAAATTTTTCCTTAAAATAGCTGCCTGCATTTTTGTTTAAA---GGGAAGAGGATG--------------TTTATGCATCTTG-------TAACTGAATAAACATTAGTTCCATCTCAAAA---TGATTTCCTGCAGTCAGTTAC----TACTTAC---------ACTAG---AATAACAGGACTAGGATTCATAATGTATGCTTATTTATAGAAGCAAGTTGAAATGTTAAACCTGTTATAAACTCATGCTACCTTGTATATTTGAAG-AAGACT-GAGGCTAACATCCAGGTTATTTTCTACAGCACATTTCAGCATTTTGCACATGTACTAACATTAAGATATTCTGA--AAAGAGAAGGAAAGTTGTAGCTTT---------------------AGTATTAAGATTTAGGACAAATCCAAAG--AAGGAGCTTAGTG--TCAAAATTACA-----TTGTAATTATGTTTACCTTATTTCATAGACTTCGCTT----TGCTA---TTAATAATTCTTTTTATTTTTTGTTTCAGGCAGTTCTTGCTGACCTTTCTACTTTAAAAGTTATGCCTCTTCTTCAGATTTTTCTGTTTGCTACTGTCACCTGATCTTCTTCACAGTCACTGGCAACACA--TCTAGTTTTTCATTAGAAACAAATCATGAACTATGCAAACTCTGCATAAAACCAAAATGAAACTTTGCATATAAGCCAATAAAGATCATGTTCCCTCTTCAGTTAAACCTAAGTAGTTTCTCACTTTTTGAAACAATAACTCTGCACC-AAATAT-TGCATCGCATGCTGCTGATTTTCA chr4 - 94230402 18684688 18684687 18686104 75544299 75544298 75545715 1417 CTAATTAATAGGTCATTGACTTAAATATTGGTTTGTTGGCTTTTTTTTTTTTTTCCAGTCCTGGCAGCTGCTGTATTTGCTTTCCGAGCAGTCAACCTGATGGAGGTGACATCATTGGCTGCAGCTGAAGTAAGGATAAGTTTCAGTTAGAGGAGATTGAAATAGTTTCTGATGCTTTGCCAGCCACAGTAACCTAAGCCTCACATGGCACGTGGTACATAGTGCAAATGTTTCT----GCCTAAATTCTTATCTTAGATAAAAACTAGATAAATTTTGAACATGCAGTACATAATACT----ACTTCT-------CTGGAGTAAAT--------GGAAGTAGAAGTATAT----TTGTTACATAAATGCAGT---------CAGCAAACTATGTTGC-----------------ATAATTAGCGCTTTTTTCCTATTTTATTCTCAAAATATGTTTGTGG-GATATATTGTTTTT--------AAAAGTACTGTGGAGGTTTGTACCTTTTTTCTCAGTATATTTTAATGTAGCTACTTCTGTGCTTTTTAATATTAGAAAGAGTTAATGAAGTTAATTTTGTTAATATTGAATCTGAAAATTCATTGCAAGTAGTATCATATTACAGATAGGAAATGGAAAAAAAATCACTCATTAAGATGAAGATTAT--TATTGTT-TATCTGTGCTAGTTTGTTAAAATAGATTTTTTTCCCAAAAATGTTGTGATACATATTTTTTTAAACATGGAGAGATCGTGATTGTTTCAATTtttttttttgttttgttctgttttgttttTTAAACAT--ACTTCATCAGAAGACATTGACTCTTTG-AGTCA-TTACGTTGGACTTGCTTCACAAGTACTAGCCAAGCCACAGGATAAGGATTCTTAATTCCCAATTATTTTTAGAAGCAAGTTGAAATGTTAGACCTCTTA----------ATGCCCTGTATACTTCAAGTAAGACTAAAGGCTAAAAT-AAAGTTACTTGGTTTTATATACGTAAACAT-------ATGCTTTTTCTTTGAAGTGTTAGGATGAAAAATAAGGCAAG-AGAAGTTTTTGGCACACTGAAGTAAACCAGCGTAATTTGTTTCTAGTCAGATCTGAAACTAACTATTGTTATGAATCAATATTGAATCTTTTTCTGACT-TCTTTAGCTGCTTTAAAGAAATGCGATTCAAATGTCAAGTTTAACGAGCCTTTTGGGTTTTTATCCTAGGCTGTCCTTGCTGACCTTTCAACCCTGAAGGTTATGCCACTTCTTCAAATCTTCTTGTTTGCTACTGTCACCTGATCTGCTTCAACAATGCCGTTATCGCATTTCCGGTCTCTCATGAGAAGCTAATGATCAACTATGCAATGTCTGCATAAAACCAAAATTAAACTGTATGTATAA-----------------TATCCATTTAG--AAATCTTAATAGAATTTTCTTACTGAAAACAGTAACTTCACACAGAAGTGTGTGTAGTGCATGCTGCTGACTTTCA ..:..x.:....:..x::::.x..:..x..-------------.x:x..:.........x...........:..:.................x.....................:..............................x.:...x.:...x..............x:xx.......--:.x..x.::.x..:x..----------..x.:.....x:..x::...x..----...x::x..:...x..::.:.....x..-.x...:..:...:.xx::.:...x...x:x.----.:....-------..x...x...x--------x....x..x.:..x.:----..:...:.x:..xx..x.---------::.x....:.x:.xx.-----------------.:....:.x.:..x.x.:x:.....x..x..-------...::..x-x..::...:....:--------....x:...xx:...:x..:x.xxx:x.x.x.:x.x..:x.x..:..x..x...x.xx.:x:....x:x....xx...xx..-----:........x.-------..:..x...---...:x..x:x...:....x..-...:.xx.:::.x....-----------:...x.x.:..::x.x...:--....:..-...:...xx.xx..:::x:.....x.xx.......:x.....:x:xxxx.:...x...x......---..::...xx:..--------------...x.x::.:...-------.x::.xxx.......--::.:....xx..:.---...:.:::..-.....-....----x....:.---------.....---.::x......:x.......x....x:x::x......x.....................:....x...----------x.:..:......:..x...-......-:.......x..-x.:....:..xx.x:x::.:.:x.x.:...-------...:x:.xx.x..:.::.:..xx..--...:.x....x...-x.x..:...---------------------x...x.xx.x..:x:.x..:...::..:--..xx.x:x.x:..--....x...:x.-----..x.:.:.-.x....x..xx...x.x::.x.x..x..----..::.---....::.x:.....x:x.....:.:::....x..:..............x..::.:..:........x........:..:..::.......................x.....xx:x::.:.x:.x.:..--..::..:.:....x....:.x...x..x..........xx..................x.....x.:::.....-----------------.x:.:x..:..--...:..x.:...xx.:.:x:.x:.x:.....:.....:::...x-..:.:.-..:.x:............:..... 30M13I140M2I17M10I23M4D28M1I31M4D6M7D11M8D16M4D18M9D16M17D31M7I8M1D14M8D82M5I11M7I9M3I21M1I17M11I20M2D7M1D65M3I12M14I13M7I15M2D14M3I10M1D5M1D4M4I7M9I5M3I67M10D19M1I6M1I11M1D30M7D25M2I14M1D9M21I28M2I13M2I11M5I8M1D28M4I5M3I130M2I74M17D11M2D44M1I6M1I24M 863/1269 68.0% 1417/94230402 0.0% 256/1269 20.2% 8069087 NA +3461 chr4 + 190214555 26778416 26778415 26778487 72 AAAAAAAAGAAAGAAAGGAAAGAGAAGGGGAGGGAAGGGGGAAGGG--AAGGGGGAAGGGAAGAAGGAAAGGAA chr4 - 94230402 40472546 40472545 40472619 53757784 53757783 53757857 74 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ............:........:.:....:.:...::.....::..:--x.:.:..x::::....x....::... 46M2I26M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% -13694130 -80536272 +3015 chr4 + 190214555 26778417 26778416 26778463 47 AAAAAAAGAAAGAAAGGAAAGAGAAGGGGAGGGAAGGGGGAAGGGAA chr4 - 94230402 49394850 49394849 49394896 44835507 44835506 44835553 47 AAAAAAAAAAAGAAAGAAAATAGAGGGGGGGGGGGCGGGGAAAGAAA .......:........:...x...:....:...::x......:.:.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -22616433 -71613969 +3786 chr4 + 190214555 26825174 26825173 26825247 74 CTACAACCTCCAGCTCCCTGGTTCAAGCGATTCTCCTGCCTCAGTTTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:..:xx....:.:x........:.x...x.xx.x.....::.::.:.........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 8628048 NA +3163 chr4 + 190214555 26827692 26827691 26827738 47 GCTTTCTTTTTTTGTTTTTTGTTTTGTTTTTTTTTTTTTGATAGGGT chr4 - 94230402 42074069 42074068 42074115 52156288 52156287 52156334 47 GTTTTCTTTGTTTGCTTTTTGTTTTGGTTTGTTTTTTTTGACAGTGT .:.......x....:...........x...x..........:..x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -15246377 -78984025 +3940 chr4 + 190214555 26831671 26831670 26831745 75 CTCCTGAGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCATAGGTGCATGCCACC chr4 - 94230402 18197139 18197138 18197213 76033190 76033189 76033264 75 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATC ..:...:.......:.x...x.xx.x........:............:......x.....:x:x..::.::..:. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 8634532 NA +3133 chr4 + 190214555 26842505 26842504 26842572 68 CCTTCTCCTTCCTTCCCT--TTCTTCCCTTCCTTCCCTCCCTCCCTCCCTCCCTCTTTCTTTCCTTTTCC chr4 - 94230402 92729634 92729633 92729703 1500700 1500699 1500769 70 CCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCCC ...x:.:..:.:..:...--..:..:...:.:.:.....x..:.:....:..x:.......::...::.. 18M2I50M 47/68 69.1% 70/94230402 0.0% 2/68 2.9% -65887129 -28343273 +3150 chr4 + 190214555 26842586 26842585 26842690 105 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCCTTTCTTTCTCTTATTTTTTTGTAAAGAT chr4 - 94230402 22515278 22515277 22515387 71715016 71715015 71715125 110 TTCTTTTTTCTTTTGTTGCTTTTGTTTGTTTTAAACTTTCCTTCTCTCTCTCTTCCTGCCTAACTTTGCTATTCTGCAGCCTTTCAAAGTTCCCATATCTTTGTAAGGAT ......:..::...x..x....:x..:x..-----.....:....:...:....:..x:..xx....x::x....x.xx:.:..:xxxx:..::..x.:.......:... 30M5I75M 68/105 64.8% 110/94230402 0.0% 5/105 4.8% 4327308 NA +3159 chr4 + 190214555 26850529 26850528 26850592 64 AGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAGAAAAAGAAAAAGGGGA chr4 - 94230402 37322381 37322380 37322444 56907959 56907958 56908022 64 AAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGA .:.x..:x.x:......:..............:...:::......x:..::.:....::.x... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -10471852 -83758550 +3809 chr4 + 190214555 26882929 26882928 26882994 66 CTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCATGCGCCACCAT chr4 - 94230402 18197142 18197141 18197205 76033198 76033197 76033261 64 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT .............x...x..x.x........::.:.........:......--.:...:....::. 51M2D13M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% 8685787 NA +3078 chr4 + 190214555 26891454 26891453 26891587 134 TATAATCTTGTGAACTAGTTCCTTAAAATAAATCTCTATATTTATACACATATATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACACACACA chr4 - 94230402 73121092 73121091 73121213 21109190 21109189 21109311 122 TGTAATCTCGTGTGC------------ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:......:...x:.------------..:x..x.::...:x:...:...:.x.x.::..xx.::::.:.....x:....::x:x.x..:..x...:.:...x....:.x....x.x.......:::.:.x:.. 15M12D107M 74/122 60.7% 122/94230402 0.0% 12/122 9.8% -46229638 -48000764 +3530 chr4 + 190214555 26891491 26891490 26891597 107 ATATTTATACACATATATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 73121111 73121110 73121213 21109190 21109189 21109292 103 ATATTCATACACATATACACAGAA----GCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .....:...........::::x:x----.....x:..:....:....::x.:.:.x.....::.:x:....:.:.x.:..:.x....x.x.......:::.:.x:.. 24M4D79M 66/103 64.1% 103/94230402 0.0% 4/103 3.9% -46229620 -48000782 +3056 chr4 + 190214555 26891502 26891501 26891577 76 CATATATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:...:...x..:::.x::..:...x:.:...x:x..::x.::..xx.....:.............x..... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 18495715 NA +3111 chr4 + 190214555 26891504 26891503 26891573 70 TATATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:........:x.:x:.......x..:.:..:..x:xx..::.xx.....:...:.........x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 18495711 NA +3475 chr4 + 190214555 26891505 26891504 26891608 104 ATATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACACACAC-ACACACACACACCCCCTTTTGG chr4 - 94230402 8395788 8395787 8395892 85834511 85834510 85834615 105 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGG ..:.....:.x.......:x.:..:..:x..:.x.x:....:x..:.:xx.:.:...............x.....x.::x.:-.x.x..x..x..:x.x..:... 82M1I22M 69/104 66.3% 105/94230402 0.0% 1/104 1.0% 18495717 NA +3866 chr4 + 190214555 26891507 26891506 26891581 75 ATGTGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ........x....::::..x.:..::..x..x.x..:.:..:x.....xx...................x..... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 18495719 NA +3249 chr4 + 190214555 26891510 26891509 26891583 74 TGTGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....x.:..::..:...x.:.::...xx.x......:.::x:.:.:xx.:.................x..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 18495721 NA +3867 chr4 + 190214555 26891512 26891511 26891601 90 TGTTTGTGCATGTATATATACATATAAAGATATGTGTATACATACATACACACACACACACACACACACACACACACACACACACACCCC chr4 - 94230402 8395789 8395788 8395878 85834525 85834524 85834614 90 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCC ...x...:::...::...x....:..xxx.:..:.....:.x.....xx.:.................x.....x.::x.:.x.x.x... 90M 63/90 70.0% 90/94230402 0.0% 0/90 0.0% 18495723 NA +3850 chr4 + 190214555 26897841 26897840 26897921 81 CTGTAGCCTTGACCTTCTGGGGTCAAGGGATCTTTCTGCCTCAGCCTCCCAAATAGCTGGGACCACAGGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..::....:x:.x........x.....x.x.::x:xx.x........::...:.......:..:...x.........::.. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 8700715 NA +3077 chr4 + 190214555 26906430 26906429 26906484 55 AAGTTTGTTTGTTTTTTTTTTTTTTTTTTGAAAAGCTATTGCAGAGTTTCAGCAA chr4 - 94230402 24366040 24366039 24366094 69864309 69864308 69864363 55 AAGTTTGTTTGTTTTTTTTTTTTTTTTAAATGAAGCTTTTGTGAAGTCGCAGGAA ...........................xx:x:.....x...:::...:x...x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 2540390 NA +10664 chr4 + 190214555 26919489 26919488 26919714 226 TTTGTTCTCTTTCAGATCCCTGCATGTCACTGAGTCCACCATGCTTTACAGAAGAAGACAGATTTAGTCTGGAAGCTCTTCAAACAATACATAAACAAATGGATGATGACAAAGATGGTGGAATTGAAGTAGAGGAAAGTGATGAAGTAGGTGGAAAAATGTTTTCCTTGCTATTGTCTTAGAACAGAATGACTGCATTTCTGTTTCTGGTCTTCAATTTTCTCTT chr4 - 94230402 18743993 18743992 18744207 75486196 75486195 75486410 215 TTTTTCCCCTTTTAGATCCCTGCAGTTCTCTCAGCCCACCGTGCTTTACTGAGGAGGACCGGTTCAGCCTGGAAGCTCTTCGCATGATCCATAAGCAAATGGATGATGACAAAGATGGTGGAATTGAAGTAGATGAAAGTGATGAGGTAAGAGGATAGAAA--------GCCCTCACCT--GTGCAGTA-GACTTCATCTTTATTTCTGAACTCAAGTTTATTCCT ...x.:.:....:...........xx..x..x..:.....:........x..:..:...x.:..:..:.............:x.::..x.....:......................................x...........:...:.x...x.:.x:--------..:x.:::..--.x:...x.-....x...:.:.:......:x..:x.:...x:..:. 161M8D10M2D8M1D36M 164/215 76.3% 215/94230402 0.0% 11/215 5.1% 8175496 NA +8792 chr4 + 190214555 26957597 26957596 26957731 135 TTTTCT--CTTCTATAGTTCATCAGAGAAGATATGAAATATAAAGATGCTACTAATAAACACAGCCATCTGCACAGAGAAGATAAACATATAACGATTGAGGATTTATGGAAACGATGGAAAACATCAGAAGGTAAG chr4 - 94230402 18751669 18751668 18751805 75478598 75478597 75478734 137 TTTTCTGCTTTCTTCAGTTTCTAAGGGAAGATATGCAGTATAAGGATGCTTCTAATAAACATAGCCACCTGCATAGAGAAGACAAGCATATCACTATTGAGGATCTATGGAGACGATGGAAAACATCTGAAGGTAGG ......--:....x:....:x.x..:.........x.:.....:......x..........:.....:.....:........:..:.....x..x.........:......:...............x.......:. 6M2I129M 113/135 83.7% 137/94230402 0.0% 2/135 1.5% 8205928 NA +3261 chr4 + 190214555 26970176 26970175 26970271 96 ATTGTTTCGGTTTTAGTGTGTGTGTATATATATATATATATATATATGTATATATATATATATATATATATGTATGTATTTT---------TTTATTATACTTTA chr4 - 94230402 50941840 50941839 50941944 43288459 43288458 43288563 105 ACTGTTAGGCTTTAAGCATGTTAGTCTTTAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTTTA .:....xx.x...x..::...xx..x.x..x..x.x.......::.::x.:.:......::..x....:......:......---------:x....x....... 82M9I14M 67/96 69.8% 105/94230402 0.0% 9/96 9.4% -23971664 -70258738 +9196 chr4 + 190214555 26995362 26995361 26995519 158 CCTTTTATCTCCTGCAGTTCATAATTGGACCCTTGAAGACACTCTTCAGTGGTTGATAGAGTTTGTTGAACTACCCCAATATGAGAAGAATTTTAGAGACAACAATGTCAAAGGAACGACACTTCCCAGGTGAGTCTTTGTTATGCAAATGTATTTTC chr4 - 94230402 18763335 18763334 18763487 75466916 75466915 75467068 153 CCTTTTTTCTCT--CAGTTCATAATTGGACTCAAGAGGACACTCTTCAATGGCTGTCAGAATTCGTTGAACTGCCCCAGTATGAAAAGAATTTTAGGGAGAGCAATGTCAATGGAACAACACTTCCCAGGTGAATATT--TCATGTGAAT-TACTTTC ......x....:--................:.xx..:...........:...:..x:...:..:........:.....:.....:...........:..x.:.........x.....:...............:.x..--.:...::...-..:.... 12M2D124M2D10M1D7M 127/153 83.0% 153/94230402 0.0% 5/153 3.3% 8232027 NA +9009 chr4 + 190214555 26999203 26999202 26999363 161 ATATGTG-TGTGTGTTTTTCAAATAAACAGGATAGCAGTGCACGAACCTTCATTTATGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACAGACAAAAACTTCAGCTCAAGGCATTGGATGTGGTTTTGTTTGGACCTCTAACACGTTAGTATTCTCTCTC chr4 - 94230402 18764083 18764082 18764244 75466159 75466158 75466320 162 ATATGTAATGTGTTGTTTTGTCATTGACAGGATAGCAGTAAATGAACATGCTTTCATGATCTCTCACCTGAAAATAATTGACCGGAGCCATAGACAGAAGCTTCAGCTTAAAGCCTTGGATGTTGTTTTATTTGGACCTCTTACACGTTAGTAATTTTTTTC ......:-.....xx....xxx..x:.............:x.:....x.x.x..:........:..x:.......x.x.........:..:.....:..:........:..:..x........x.....:...........x...........x.:.:.:.. 7M1I154M 127/161 78.9% 162/94230402 0.0% 1/161 0.6% 8235120 NA +14238 chr4 + 190214555 27002191 27002190 27003113 923 TTAATCATC-TGTAATTCTTTTAATAGGCCCACCTCATAACTGGATGAAAGATTTTATCCTCACAGTTTCTATAGTAATTGGTGTTGGAGGCTGCTGGTTTGCTTATACGCAGAATAAGACATCAAAAGAACATGTTGCAAAAATGATGAAAGATTTAGAGAGCTTACAAACTGCAGAGC---------------------------------------AAAGTCTAATG--------GACTTAC-----AGGAGAGGT-----------------AAGTTCAGAAAAA---------------------TCATAACTCATTTATGTAGGCAAATACAATTTGTAAAAAAAGTGAT-ATGGGCATGTG-------------CTTAAATACTTACATTT--------AGGTTATTATACACATCAGGAATAGATGCATATTTGATTTC-----ACATTTTTAGAAAAGTATACTTTTATAATTACAGATTTA------TTATAAATGTGTATACTTGAGAATAAATGAGTAGAAGAACAGTGGAGGTAAGTCAAATATA----------------GTGGAATTAGA---TGTGTAGTTAAATTTTATTTTTAACTTGATTTAAATAATTAGGAAT-TTTTGAAAAGC------------TTTTTGCGGAAG---------------------------------AGTATTTCCCTGCTTTCCCTGTCATTTGAACC-----------------CAGGATAAC-------------------------CAAAATAGCTG---TATAGTAAGTTGCCTGATATTTGTATTAACCAAACTTAA----------------------------GGCTAATGAAAAATGCTATGA-----------------TTTCTGATTGAAATATG----TATTTAATCGCTTG------------------------------------------------------ACCCAGT--ATTCATTATTTTGTAAAAAAAAATA---------------AAACTGGAAATTTTT---------GTGAGGAATTTT-----TATTTTTATTGTTCTAT----AAGGCTTGAAAAGGCACAGGAAGAAAACAGAAATGTTGCTGTAGAAAAGCAAAATTTAGAGCGCAAAATGATGGATGAAATCAATTATGCAAAGGAGGAGGCTTGTCGGCTGAGAGAGCTAAGGGAGGGAGCTGAATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAACAGGTATTTACA chr4 - 94230402 18765433 18765432 18766721 75463682 75463681 75464970 1289 TTAATGATCATGTTATTCTCTGTACAGGTCCCCCTCACAACTGGATGAAGGATTTTGTATTAACAGTTTCTATAGTTATTGGTTTTGGAGGCTGCTGGTTTGCGTATACACAGAACAGAACCTCAAAAGAACACATCACAAAAATGATGAAGGACTTGGAAAGTCTGCAGACAGCAGAACAAAGTCTTCTTGATTTGCAGGAAAGGTATAAAAACAAAAAAAAGTTAATGTTGTCCTTGATTTCCTTTTGAGGTGAAGTTTAAATACAGACCACTTATACTCAAAAAAAAAAAGTTGCCTTAAGCTTCCTTCAGATTTTGTTCATTTTTTAAAATGGAAACTGTAATCTCAGTGCTGATGGGGATGTTGGTAGATATTGCTCCTGGGTACTTGAAATTGTGATAGTAAGTTAACATGTGAGTTGAGAATAGAGG----TTTGATCTTGATCTACTGATTTAGAAGAAGGTATTGTTATTTTCATATAATTAGTTAACTTTGGAATCTATATCTTCTTATGTACATTGACGTGACAACA-CAGAAGTATGTTTCATCTGTTTTTTAGCTCTTAAGATTGAACCACACCTTGACTGATTATATTGTTTATTTAGCTTTATGAAAGTTATTAGGTTTCTTTTGACATGCATGTAACTCAATTTTCTATAGAAACTGATACTTTGATCTTTAACGAAGGCTCAGTGAAAAGTTGACGTATTTTGTTTGACACTATAAACATCTCATTGTGATGCTGCAGATTCATGCAGCTTGTTCAGTTTTTATTGtcacagaatggctgaggtgggaagggatccctggaggctgt-tcagtccaactcagagcaggttgcccaggactgcgtcgaggtggcttttgaagatctccgagaagagagactccacagcctctctgggtgtcttgtgccagtgcttgctcacctgcacagcataggcattcttcctgctgtccagagggaatcttctgtttccatttgtacccattCAATTTGTGGTGTTGTGACGTTGAACACATTTTCTTCTCTGGAGGATGGTAACTTCTAACAAACGTGCTATGTGTTTTCTCATTTTTTTTTCTGTTCAATTGTGAAGGCTTGAGAAAGCACAGGAAGAGAACAGAAATGTAGCTGTGGAAAAGCAAAATCTGGAGCGCAAAATGATGGATGAGATCAATGATGCCAAACGAGAAGCTCATCGCCTAAGGGAGTTGAGGGAGGGAGCTGAATGTGAGCTCAGCAGGCTCAAATATGCAGAGGAGGAGCTGGTGCAGGTATTTGCA .....x...-...x.....:.xx.:...:..x.....:...........:......:.x:.x..............x......x...................x.....:.....:.::..x...........::.::.............:..:..:..:..::.:..:..x.....:.---------------------------------------...:x:.....--------..:..x.-----...x..:..-----------------.x::...:.....---------------------...x.x:.::..:..x.xxxx....:x..x:.....xxxx....x.-.....x....x-------------.:.:::.....:x.x..--------.:....x:..:::x:.:::.......x.----......:.:-----..xxx.......:.:x:..:.x....xx.:.:.x.x...------..xx:...x.:...x:.:xx:x:..x..x::::x:.x....-::..:...x..:xx..x.:----------------:.x...::.x.---..xx.::...x...x.x.x....:...x..xx..:.x......xx.-......x.x..------------...:.:::...:---------------------------------.:x:..xx.x.::...x::..x..:.xx..x.-----------------...:x.x.:-------------------------..:...:....---.:x::x::.x.x....:x:x:...-.:.::.x....:.:----------------------------....xx....:.x:x.::x..-----------------.:....:x..xxx.:..----.::..:x..:.:..------------------------------------------------------.....x.--...::.x:.x....:.x:xx:..:.---------------.::x...x..:..:.---------.:x.x.x:....-----.x.....x:.....x..----.........:..:...........:...........x.....:............:.:....................:......x....x..:x::..:...::...x..:..:...:.:....................::.x..:..:.x:x.:........:x....::...x:.........:.. 9M1I170M39I11M8I7M5I9M17I13M21I46M1I11M13I17M8I28M4D9M5I39M6I41M1D19M16I11M3I46M1I11M12I12M33I32M17I9M25I11M3I24M1D14M28I21M17I17M4I14M54I7M2I25M15I15M9I12M5I17M4I190M 623/917 67.9% 1289/94230402 0.0% 378/917 41.2% 8236758 NA +12556 chr4 + 190214555 27007514 27007513 27007710 197 CTTCCTTTCCTTCTT-----CTAGGTTCGCATGGCTCTGAAAAAGGCCGAAAAAGAATTTGAACTGAGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAATGGCTTCAGTTAACACATGAAGTAGAAGTGCAATACTACAATATTAAAAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAAAGATGAGGTACTCTCTT chr4 - 94230402 18767212 18767211 18767413 75462990 75462989 75463191 202 CTTTCATTTCTTTTTGATTGTCAGGTGCGCATGGCTTTAAAAAAGGCTGAGAAGGAATTTGAGCTGAGAAGTAATTGGTCTGTTCCTGAAGCGTTGCAGAAGTGGCTTCAGTTAACACATGAAGTTGAAGTACAATATTACAATATCAAAAGACAGCATGCTGAAATGCAATTAGCAATCGCCAAAGATGAGGTAATGACTT ...:.x..:...:..-----::....x.........:.:........:..:..:........:........:.:............x..x..::.x.....:.......................x.....:.....:........:........:x.:...........::....x..:..:............x.xx... 15M5I182M 161/197 81.7% 202/94230402 0.0% 5/197 2.5% 8240302 NA +24335 chr4 + 190214555 27008414 27008413 27009050 637 TTTTCGGTTTCTAGGCAGAAAAAATTAAAAAGAAGAGAAGCACAGTCTTTGGGACTCTGCACGTTGCACACAGCTCCTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAAGTAAGA-------------ATGTTGTTTTCACTTTTATTTGATTTATGTTTATTGTG-----TTAAAATGAGTAATTTGTGA-----ACAATTTATATTTATCA---TTTATATAATTACAT-AATTTACATT--------------------AGTTTTAAGAGTGGGTTATTTCTTCTTGAAATTAGTTAATTGCCATGGTCTGTTCATGTATTGCCTTTTTTCAGTGCCATATTAAAGACCTTTTGATGCAGTAAGTAATTTCTTTATTGGCTTTTC--CAGGAAAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAACGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCCTTTATTCTGATCACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTTGATGACTTAGATGAAGACACACCCCCAATAGTGTCACAATTTCCCGGTAAGTGGCAATTTCAACAAAAATTGTTGGTACAGGTTTTAAAGTAAT chr4 - 94230402 18767572 18767571 18768217 75462186 75462185 75462831 646 TTTCTGCTTTTTAGGCAGAGAAGATAAAAAAGAAGAGAAGCACTGTGTTTGGAACATTACATGTTGCACACAGCTCTTCACTGGATGAAGTGGACCATAAAATCCTTGAAGCCAAGTAAGACTAATACTGGGTTGTGTGCTTTTTTTTTTTCTTGGAGGGAAGAAAATTGTGAATTCCTGGAACAATTGAATTGGAGTTATGGTACTTAGTGTTTTTGAATTTTTATGTGAATAGGTTAAAATACATTGATGTTGGGAATACTTGGACAGTCTTAATAGACATTTAGGTATTCTAGAA------TAACTGC-ATGG---------GTGTTGCTTT--------GTCATTTAAAA----------------ATGTAATTTTCATGTGTGATTTTCTTCAGGAAAGCGCTGTCTGAGTTGACAACCTGCTTGCGGGAGCGCCTTTATCGATGGCAACAGATTGAGAAGATTTGTGGTTTTCAAATAGCACACAATTCTGGGCTACCAAGCTTGACCTCCTCTCTCTACTCTGATCACAGCTGGGTAGTTATGCCCCGAGTTTCCATTCCTCCTTATCCAATTGCAGGGGGAGTTGATGACTTAGATGAAGATACTCCTCCAATAGTTTCACAGTTTCATGGTAAGTGTTAAGTTCAGTAAAAAGGGAGGGGAAAAGCTTTGGAGGGAT ...::.x...:........:..:..x.................x..x.....:..x:.:..:..............:..x..:.....:..:.....:.....:..x.....x........-------------:...xx....:x:....x..x..xxx.x.xxx......-----:.::..::.x.:.x...x::-----::.x..x:.:...x.x.---.....:.:.x..x:.-..xx......--------------------...:....x..xx:x...xx.x....x...------...:...-....---------..:....:..--------.:...x.x...----------------.x.......::x.:.xx.x.....--.........x..x..............:..:..:..:..:..x....x...x........:...........:.....:.....:.....x..:..:..x..:..x..x...:.......:..:..:..:.................:..x......x....:........x..:...........x..:.......................:..x..:........x.....:....x:........x:..x....::.....xx.xx..x.x.:.:...::..x:.. 121M13I38M5I20M5I17M3I15M1I10M20I30M6D7M1D4M9D10M8D11M16D24M2I290M 451/597 75.5% 646/94230402 0.0% 89/597 14.9% 8240842 NA +10160 chr4 + 190214555 27017687 27017686 27017987 301 TGTTTCTTTCTTGGTGTTTTTCAGGGACCATGGCTAAACCTCCTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTCAGCGAGCTCAGCTTGCTCCACACGCCCCCCACCCGTCACACCCTCGGCACCCTCACCACCCGCAACACACACCACACTCCTTGCCTTCCCCTGATCCAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTTATCGAAATGAAGAGGAGGAAGAGGCCATTTACTTCTCTGCTGAAAAGCAATGGTA chr4 - 94230402 18771295 18771294 18771518 75458885 75458884 75459108 224 TGCTTTTTCTTTG-----CCTCAGGGTCCATTGTAAAACCTCCAAGCACACTGGCAAGAAGCAGTAGCTTGTGTCGATCAAGACGCAATGTTGTGCCATCATCTCCACAGTCTCAGCATGCT------------------------------------------------------------------------TTGCACTCCCCTGACCCTGACATCCTTTCTGTGTCGAGCTGTCCAGCTCTTTATCGAACTGAAGAGGAGGAGGAAGCCATTTACTTCTCTGCTGATAAACAATGGTA ..:..:..::...-----::......x....x.:x........x:.xx..:.:..x........:...:....:..x...x.x....:::.......:..x..x..x...:......:x...------------------------------------------------------------------------....x:........:..x..:.....:..x.....:..:..:..x..x..........x............:..:....................x..:........ 13M5D104M72D107M 174/224 77.7% 224/94230402 0.0% 77/224 34.4% 8246392 NA +63145 chr4 + 190214555 27022491 27022490 27024550 2060 TTTGTACCTTTGTTTGTGTTTCATTCAGGGAAGTGCCAGACACAGCTTCAGAATGTGACTCCTTAAATTCTTCCATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGA---TTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCACACATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCAAAAAGCCATCAAAAATCAAAAGCCTTTTTAAGAAGAAATCTAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACCTTTTTTTTGGTTTAATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCAT--AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGCTTATTTAAGTGACTATATATAATCAATTCATCAAGCCAGTTATTACTGAAAAATCATTGAAA---TGAGACAGTTTACAGTCATTTCTGCCTATTTATTTCTGCTTTGTTCTCAGTGATGTATATGCA---ACATTTTGTTGAAAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTATCTTTCCACAGAGCTA-----TTTACATCCTGGACT---ATATAACTTAAAAGAAGTAA----AACGTAATTGCACTACTGTTTTCCAGACTGGAAAAAAAAAAAATCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTGTTTTCACTTTTAGATCAAAATGGGTTTTTAAGTAGAACCTAGGGTTTCTAATTGACTTGATTTCTGGAAATGAAAAC-CCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTCCCCAGGGCTTTCACTGTGA-TTTACTGCATTGCAGGCTGTATGATAAA---------ACACACATAATTTAAAGAGAGAAG--GCTCTTGATTCCTTATGCAAGTGGAAGAGTTGAAACTTGATTGAAGGACTTAAAACATTCACAACCTTAAGCCGAGGTGGGGGGATATGGGGATTCAGGCAATTGTTTACACACTTTGAATAACTG-CAAAGGATTTACGGTTTGTGAAAAATGTGTACTGTGGAAAAGATAATAAATTGAAGACATTATTGTG---TGGGATTGTGCTGATTTTTGTTGAT----------AACACA---AAAAACACTATGTTTTCTGGAGAGCT-GTGTAAGCTGTCTTGT---TGCTTAGTTGCAATATAAGAAATAGTGATG-----TTTTGGACGTAAGTTGTCAACA----AATTTCT------------ATTTTATATTGTTATATTTTTATGTAGTTTGAAATGTAAAAATGTTCTA--ATATCAAGATTAACAAATATAAATTTATGGTGCATTTAGATTGCGTTGTATTAATTTA-----TAAAGTATGGTGTTCATTAAATTGGTGGGTTGTATAAGGGTAGCTTTTGTTG-----TTAAAAAAACAGTAGAGAGTTAAGTTCCATA-----TAGCAACAAAGTATGTTAACATCTAGGG----AGTTTCTGCTTATACCA-----------CTTTAAA-AATATGCAATCATAAGTGATTTGGTTACTGCAATGCAGATGGATGTTTGGATGAACAACTGATACATTTTAGTTAGAATGCTTTTTCAGCATTATGGCTAAAATATATGTCTAACCCAGTGCTATTTAGGTGAAAATGCTAATTGATAAACCAGAAGTTTCTTTTGAGATTTGCTTTAAAGAAA-------TGCTTTAGTAAGAATATGAACAATTT chr4 - 94230402 18772299 18772298 18774266 75456137 75456136 75458104 1968 TTTTCTCCTCTGTTTGC-TTTGACTCAGGGAAGTACAGGAAACAGGTTCGGAATGTGACTCGTTAAATTCGTCCATTGGAAGGAAGCAGTCTCCTCCATCTAGTCTTGAGATGTACCAGACACTTTCTCCTCAGAAGGTATCCCGGGAAGAACTTTCACTTGAGGAATCATCTACAGGAGACTCTTCTTCTCTAACTGCAGATATATCTAGGGGCTCTCCTGACTGTGTAGGCATGGCAGAAACTAAAAGCATGATTTTTAGCCCTGCAAGCAAAGTTTATAATGGAATTCTGGAGAAGTCCTGCAGCATGAACCAGCTTTCAAGTGGGATCCCAGTTGTAAAGCCTCGGCACACCTCATGCTCTTCAGCCAGCAGTGATAGTAAACCCAGCCAAGAAGTTTGTTCTGTCCCTAGGATAAGTAGCATCCCACAGGACCTGTACCAAAATGGTGAAAAAAACAAAAAGCCATCAAAAATAAAAAGCCTCTTTAAGAAGAAGTGTAAGTGAGGTG--------GGCAGAAGTCTGT---AGTAACAT-TATAAG-------------------------AACTCTTTTTTTAAAAAATCTTTAGGAATGTAATTCCATTTGTGCATTCC---------GTTATTGAATGGGATGTTCTCTAGGTCAATT-------------CTATTTAACTGAC----TCTTGTCAAAG-ATCGTGCCAGCTGTCAATGAGAAATCATTAAAAATTTCAGACAGTTTACATTCATTTCTGCCTATTTATTTCTTTTTTTCTTCCCCTTTTGTTTATTCATATACCCTTTTT---AAGCCACTTTGGACTTAAAAGCTTTAATGAACTAGTAAGCCTTCCTGGGCTTGCCAAAGTTGATTGTTTACTGGAGCATCTTCCTATCTTTCCATAGAGCTAGGACGCTTATCTACTGGACTTCAAGAAAAATAAAAAGAAGTAGAATTAATTGAATTGCACTACTGTTTTACAGACTGG-----AAAAGTCTCTCTGCAAGTGAAACTGAAAGACTTGTAT---TTGACTGAGAAGACGAAAC--TTTTCACTTTTAGATTTTTG-GGGTTTTTAAGTAGAACCTAGGATTTCTAATTGACTTGATTTCTGGAAATGGAAATGCCACGCTTTTACTATGGGAAGCTTTGTTAA-TGCATTTATTAGAATGG---TTCAAGTCCTGCTGTAAAGATAA--------TGTTTTTCCCAGGACTGTCACTGTGATTTTACTTCACTGCAGGCTGTATGATAAAGTTATATAGATGTGTGTAATTTAACAAGAGAAGAAGCTCTTGATTCCTTATGCAAGTGATTGATATGAAACTTGACTG-GGGACTGAAAATATTCACCCTCTTAAAATGAG--GAGGGGATTAGTAGCTT-------TTGTTTACA------GACTGACAGACAATGGACATCTGGTTTGTG-AAAGTTTGTACTGTGGCAAAGATAATAAATTGGAAACATTATTGTGCTTTGGGAATGTTCCAATTTTAGCTGATGCTTGTTTCGGACATATTTCAAAGTTCTGTTTTTTC---AAAGCTCTTGTAGGCTACATTGCTTATGCTTA-CTGCTGTGTATAAGTTATTGTTACATTTTTTTGGA--TTAGCTATTAATGTCTTAATGTCCTCCTTTTGTAAGATTTCATACACTT-TATTTTTGTATAGTTTGAAG-ATTTAGCTGTTCAGACATGTCTGAAGTAAATGGTATAATTTTATAATGCATAC------TGTTATACTAACTCAAAATTTTAGATATAAAGGTGA--GACTCAACGTGCTTCAGAAGG--AGTTTTTGTTGAGCTTTTATA-------TGGAGAGGTGAAATTACTATGAGGTAGCAAGGAAGCCT------ATTTAGGGCAACAGTAGCTAATTGTTCAAAACTTTTTTTTTTTTAAACAGTAGGCGACAACAAATG-------TACTGC------------------------------------TTGAGTAACAGTGCCTTTTATTCAT-------------------TTATTCAG-----TTTGTCTGAAAATGTTAAT--ACTGAGCAGGAATTTATTTTGAGGTACATTCCAAAGAAATATTTCTTGCTCTAGT--GAACACGAGCAATTT ...x:x...:......:-...x.:..........:.x:..x....x...:...........x........x..............:...........x.:x..:..:.....:.....:...:.x.....x.::...:....xx.:..x..:x.x..x..x.....x..x..:xx...:..---...x:..x......::...:.:...x....:.....:...........:x..:..........:..:.....:..:..:..............x..:.....x...:.......:.....:.................x.....x.....:..xx:x..:.....x.....x.....:..:.....::...::..:........x:x:..:....:::xxxx...:x.:..:.....:...........x.....x.::..x.....x..:....:..................x........:...........:.x.......:x..--------.:::...x:x...---...::...-.:...:-------------------------x..::.......::xxx.x:.............:......x.x..x....---------.::..--.:...:.::.:.xxx...x...:.-------------:.......x....----.x.x:....xx-...:x.....:.:.:.x...:........:...---.x............x......................x:...x:.::.xx.xx...x...x..---..x:...x.---.......xx........x...........:...x.......xx.x.........x...:..xx........::..........:..........:.......-----:...:x.x.......---.x.x..x.x..........:----..:xx.................x........-----....:xx..................x.x::xx.x...---x.....:x.:.x.x.::..--...............:xxx:-......................:............................:...:-..:........:............:x.x..-........:..xx:..:---.........:...........x.--------......:......:..x.........-......x..:..................---------.::::::........x:.......--.......................:xx..xx..........:..-:.....x....:......xx:.....:x:...--.:......xx.x:.x..-------.........------..x.:..x.-...x...:x.x:........-...:.x..........x...............:.:...........---.....x...x.::.....x.:....----------:...:.---x...::x..:.x.....---.:....-x....:...::x...:---......-:...x:.:..x:.:x..x..x.:-----.......--.x..:.:.:..::----...x..:------------....:...:xx..-.......:.:.........:-:.xx.:x.....x:--..:..x::.x...xx::.....x.....::.....x:------:...:..:...:.:.-----.x.::...::x.x.x.--:.x.::::.x.:.x:.x....--..:........-----...x.-------.:.....x.:.:x.:xx..-----......x:...:x.------..:.....----...xx..:x..:.x.x.-----------:......-.:..x..:.:x.:..:..-------......------------------------------------..x...x.x.:...:....xxx...-------------------.x.::...-----...:xx........:....--.:x:.x...:.:...x.......:.x:::.::.......-------....:....--...:.:..:...... 17M1D163M3I329M8D13M3D8M1D6M25D50M9D5M2I24M13D13M4D11M1D33M3I63M3I9M3D102M5I15M3I20M4I31M5D37M3D19M2D20M1D56M1I30M1D17M3D23M8D26M1I28M9I24M2I43M1D32M2D17M7D9M6D9M1I20M1D46M3I25M10I6M3I17M3D6M1I16M3I6M1D23M5I7M2D13M4I7M12I13M1D20M1D14M2I37M6D15M5I16M2D21M2D11M5I5M7D19M5I14M6D8M4I17M11I7M1I18M7D6M36D25M19D8M5D19M2D39M7I9M2D15M 1397/1850 75.5% 1968/94230402 0.0% 328/1850 17.7% 8250192 NA +3283 chr4 + 190214555 27028773 27028772 27028833 61 TTCTTTCCACGCCCCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTT chr4 - 94230402 17623042 17623041 17623102 76607301 76607300 76607361 61 TTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAGGTTT ...:..:.x.:x...:....::.:...........:.x....x........:...:.x:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 9405731 NA +6774 chr4 + 190214555 27048578 27048577 27049213 636 AAAATGTTAATTA--TATAATTTTTCAGTGGGAATAATCTTTGTTTC-TAAATTTATTACAGTATTTTTTCAATAATGTCAAATTTATCAGTAAGCAGGTAGAGTCCACAAAGCTGCAGTTTTAAGAGAACAGAACGACCGACTTTTTACCCCTCCTTGGA-ACTTCCCGAGTTAATGAGTAGAAACAGAACATATTGCAACGTATAATTGTCACGATTATGCGGGCTGTTCATTTAGCGTTTTCGTGTGCACATGCATTCAGCTGCCAC----ATCTGCAGTGCAC--------------GTTGGAAAAATAGCCCCTTCTCTGTGCAGTTGGAAACATCGACTGTTTCTCATTTGGAGCAATTTCTTTATTTTGTTTTGTGGATAATGAATGTTACCCACAAATATGGGAAGCAAGGAAGCAGAAACACAGTTTGTATTACGAGGAGGCTCTTA----GAGATATCCACATACACAAGTAGACAAATGTGAG--CTGCGTGTCGGCCTCA-TACAAAAACAAAGCAGGTACTGTGAAAGGGAAGTTG---TGTGTGTTAATGAGATTAATGGTTTCAGAACAAATCCGTTTCAGAGCAGCTAATT-AAAT-ATTTCGTTTTGAGTTATTTGGTGTAATTTTCTTTGGTACTC-----GACAAATACTAAGTAT chr4 - 94230402 18798990 18798989 18799630 75430773 75430772 75431413 641 AAATGGTTAATGACGTATACCTCCTCACTGTGAATAGTTCTTGCTTCCTAAGTCAATTGCTTTATTTTTCAAATAGTGTCAAATTTCTCAGTAAGCAGATAGAATTCAT-AAGCTGTGTTTTTGAGAGAAAAAGGTTTTTTTTTTCTTTCCCCTTCATAAATGCTGTCTGACTCAATTAGCAGCTGCAGAATGTTTTCTAAAGAATAATTTCTATGATAACACTGATACTTGGATT---GTCTTTTTGGGAATGCGTA-TCAATTGTCACGTGTATATATAGTTTCCCAGGAAGGACTGAAGTTGAGGGAAGAGTTAATCTTTCCTACAGC--GTTATGTCAAATTCCTTGCGTATGGAAAAGTTTCTTAAAT---TCTAACATAACATGCGTGTCACACA-------GGGACCTGAGGCACTTAAGATGCA-TTTGTAAGGAAACAGCTCTCTTAAGCTAAAATATGTATGTGC-----TGAACAGGTGTAGGCTCTGTCTGTCAGGGTCGTTGCATAAGCCTAGTAG----------AGCTAAGCTGGTCTGATGGTTATCTGGGTTAACACTTAGAGTGAAGCTCTGTCCTAGATTTTCCAGTTCAAATAATTTCATTTTGTAACAGTGGACGTAA-TTTCTTTGGTATCCAATGTAACAAATATTTGGCAT ...xx......x.--....x:.::...x..x.....:.::...:...-...:.:x...:.xx.......:x....:..........x...........:....:.:..:-......::x....:......x.::::xx::xx:..:..x.....:.x.::.-:..x:.:..x.:...x..:..xx:.....::.x..x:..x.x......x::.:...x.::.x.::xx..x:x..---..:..:x..x.x.:::.:.-...::..:...----..x.::...x:x.--------------....::::..x..::xx.::.::x.:...:--.xx.::..:.x.x::.:x.:.x....:x.:......x.x.---.:.x:::x.xx...x:...:..x..-------....xx::...x.x:x:.:.::..-......xx:x:.x::xx......----:.:....x:.::.:.-----.::...::...::.--...:x....:.xx..:-.:..x..:.xx..:..----------..xx...:..---..xxx....x:x:.:....::x..xx..x:x.:x..:..:::...x:xx.:.:..-....-.....:.....x:x:.x.x.::....-...........::.-----:.......:.x:.:.. 13M2I32M1I61M1D51M1I74M3D19M1D11M4I13M14I30M2D40M3D25M7D24M1D23M4I15M5D14M2I16M1I16M10D10M3I55M1I4M1I26M1D14M5I16M 362/602 60.1% 641/94230402 0.0% 73/602 12.1% 8249588 NA +3568 chr4 + 190214555 27051314 27051313 27051394 81 TGCAACCTCCGCCTCTTGGGTTCAAGTGATTCTTATGCCTCAGCCTCCCAAGTAGCTGGGACTATAGGCACGTGCCACCAC chr4 - 94230402 18197127 18197126 18197202 76033201 76033200 76033276 76 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA----CACGTG-CACCAC .:..:..:xx:x..::............x...x:.x.x........::...........:....----......-...... 64M4D6M1D6M 59/76 77.6% 76/94230402 0.0% 5/76 6.6% 8854187 NA +3271 chr4 + 190214555 27067238 27067237 27067301 64 TTTAAAAACTCTGTGACTTAATTCAAGTCTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 37319779 37319778 37319842 56910561 56910560 56910624 64 TCTGAATGCTCTGGGCTGTGCTTCTAGTCTGACTTCTTTTTTTGTCTTTTTTTTTTTTTTAAGA .:.:..x:.....x.x:x.:x...x......x...:.......x.:..............:... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -10252541 -83977861 +17836 chr4 + 190214555 27084628 27084627 27085258 631 TGAAAAAATAA-GAGGCATCTTCGCTGTTCTGACATTTATTATTCCCGGACTCGTTATTTTTCCTAATGAACGTTTCTTTCTCTCCTTACGCTTATCGGTTTTAACACATGCCATTTACCACCTCCCACCCGCTGATTAGGGGGCTGGAAACGGGCT-----TACATCAC-TGTCAGGGCAGGAGAGGAAAAATTGCAAAGTAAACGGCAAGATGTTGCCGCGATAGCGAGCAGGAAAATCTGCAGTGCTTAGGAGAATGCGGGACCCAAATGAAATTCCGCGTCTCCCCGCGGCGGGTGCCGCAGAGCCACCGGCGAGGGGCGGGCGCCACCACGTGACTG---ATTATTCAAATGGACCGATGATTAACTCGGTTTATATTGATGCAAATAATCCTGCCGGAG-CCTGCAACGGCTAATGCATTTTGGAACTGTGGTTTTTCCATTGATAGCACAAAATATTGTAGAGGAAAGCCATTTTCATAATATTAATAATGGAATTACAGAATCAGGTCACTTAAAGGAACGGCGCTGACTCAGCGACAGCAGCGTGGAGGTTGAATGTGGGGATTAGCAC-TGAGCAAAACGAATACAAACCTTTTGC-AGCGATCTCATTGCATAAAACGCACATCCCCTTCCCT chr4 - 94230402 18826307 18826306 18826913 75403490 75403489 75404096 607 TGCAAAAATAATGAGG----TTCTCCGTTATGAT-TGTACGATTCCCTG---------------TAATGAA-------TTCCCTCTTCAGATGCATAAATTTAAACTTGCGCCTCTTAAAAATTTAGACTTCCTGAGTAGAGAACACAAAGCAGACTGTTTGTGTATAATATGCCAAGAAATATGAA-AAAAATAATGAAGTAGATTGCAAGATCTCACACTGATAGAGAGCAGTAAAATATGTACAGGCCAGACAATTATA--ACACAAATAAAATGCAACATTTTACAGAAGCAAAC----CATGGCTACCAGCATAGCTCTGGCACTGGCATCTGAGTGGTGATTATTCAAATGTCTCCATGATTAATTCAGTTTGTATTGATGCAAATAATCCTAGAGGAGACCTGTGAGAGCTAATGCATTTTAGTGCTGTGGCTTT-CCACTGACAGCACAAAACAGCAAAGAGGAAAGTCATTTTCATGATATTAATAATGGGATTACAGTATCAGGTCATTTAAAAGAATGGTGCTGACTCAGCTGTAGTAGTGCAG-GGTTGAATGTGGAGATTAATTCTTGAGCATGCCACATTAAAATCTACTGCTGGATATCTCATTGCACTGAA-GTATATTTCCTCCTTT ..x........-....----...x.:...x...:-.x..:x......x.---------------.......-------...:...:.:.x::x:..x::...x...x:::...x:...xx.x:.:xx..::x....x...:.::.xx:..:.:.:..-----.::..x.:-..:..:.:x.x:x..:-......x:::.....:.:x.......x.::.xx:.....x......x.....x..:.xx.x::..:x:.x.:::--..x.....:....x.x:.:.:.:x.x.x:..::::----..x:..:...:..:x:.xx.x...:.::x..:x...x..---............xx:.x........:..:....:...................:xx....-....::.x:.............:.x:......:...-...:...:.........:.x::x.........:.........:.............:.......x.........:.....:...:..:...........x::..:..:.::.-............:.....::x.-......x:x.:x..xx...:..x:...-:.xx...........:x:..-.:.:..::...:.::. 11M1I4M4D14M1D14M15D7M7D79M5I8M1I16M1D74M2D35M4D39M3I60M1I36M1D112M1D22M1I27M1I20M1D16M 406/594 68.4% 607/94230402 0.0% 50/594 8.4% 8258321 NA +8839 chr4 + 190214555 27096621 27096620 27096842 222 CACTAGGGGGCACTTCAAGACTGAGTAAGAAAAAACCCCCAGCAACTTGGTGACAATACATTCCACTTCACCATTAACTGGGTAAACAGTCCTGTACAAAACAAAATATAAAAAATACATAAGGAATTAAAAATGTATTTAGCTGAAACTGTGACTCGATTTCTGCGAGTCATTTTCT----ACACCTGT-TTTCTTCAAACTGGACA--------GAAGTGGCATTCTTGGTCT chr4 - 94230402 18833192 18833191 18833415 75396988 75396987 75397211 224 CAGCAGGGGGCACTTTAAGACTGGTTAAGGGAGG----TGGAAAACTTTGCAACACTA-ATTCCACATCATCATGAGCAGAGTAAACAGTCTGGTACAAAACAAAATATAAAAAAAACATAAGCAATTAAATATGTATTTAGCAGAAAGTGTGATTCGATTCCTGT------TTTTCCCCCAGCAACTGCACTTGCTGAAACTGGACATGGAACTGAAAATTACTTTCTTGTTCT ..x:...........:.......:x....::.::----:x::x.....x.::...x..-.......x...:...x.:.x.:..........:x......................x.......x.......x...........x....x.....:......:...:------.....:----:..x...:-:..x:.x..........--------:..:.x:.x......x... 34M4D20M1D107M6D6M4I8M1I17M8I19M 163/211 77.3% 224/94230402 0.0% 24/211 11.4% 8263429 NA +12018 chr4 + 190214555 27101414 27101413 27101893 480 TCTCCACCAGAGCACTTAGGAGACGTGCTGAGATGTTAAGTACTGAGGGGT-GAGGGATGTTTTTGTTGCTGTGCTCGGCAAAGCCG-ACTGCTTTTTACAAACACATTAAACATTAATATCTACAGAATGGGCAGTTTTATAGTGCACAAGCAAGAGTTTCTTGGACACGGATTTATTTATTTTTTATTAATGTAACCTTAGTATGCCGCATATTTCTTGCAGAGCTCCAGATCTCAAAGGC-CTTCGCTGGACCCAGTGAATACTTTATGATTCCATTTAAGACCAAGGGAACCAAT-AAACTCACCCCAATTTACATTTCAGTGGAGTCTCATAAGTAATGCATGCCTGCATACTGCTGGCCCTC--AACTGTCTCCCGGACTGCCTTTAATACCTCATCACACGCGTGACCTTT--TCAGGAGGCTGAGAACAGAGGAGTGTTCTCTTCAAACTGTTTTCTTTTTCTTGCCTCAACACGTGAAA chr4 - 94230402 18846400 18846399 18846848 75383555 75383554 75384003 449 TCTCTGTGAAACCTTTTTGGACCCATACTGTGATTGTAAGTGCTAGGAGGTTGCAGGACACTTCTGCGGATATACTTCACAAAGCAGGACTGTTTTTTATG----CATTAAACATTAATGCAGACA-AATGTGAAGCTTTATAGAGCAAAAGCTTTATTTGCTTGGACATG----tatttattttttattaata-atttttaCCATACTACACATTTCTCTTAAAAATTTGAACTTTGAATATGATTCCTTGGACTTAGTAAATGTT-----GTTTCATATAAAACCAAGGGAACAAATGAAAATCACTCAGATTTACATTTCAGTGAAATCTCATAAGTAATGCATGA---------ACTGGGCTTCAGAACTGACTTGTACAGGGCCTTAAGTACCTTCTAACACTCATCTCCTTCTATAAGGAAACTGCAA--AGAACAATTTTTCCTCC-------------TTTCTTTCCCAAACCAGAGAAA ....:::x.:.x.x:..x...xx.:.:...x...xx.....:..::.:...-.x:...:::..:..:x.x.:.:..:x:......x.-....:......::----..............::xx...-....x.x..:.......x...x....xxx.x..x........:.----..................:-.x::...x:..:.::..:......:x:.:.:x.::::.::.::..x::-x...x:.....::...:...::.-----:..:...x...:...........x...-...x....:.x:...............:.:..................x---------:....x.:..--.....x..:x::x.xx.....x.:.....:x.x....x.:.xx....:--.x....::...x:.--...:x.:.x..::..:.-------------......x..:x...xx.x.... 51M1I35M1I13M4D21M1D44M4D19M1D48M1I23M5D27M1I49M9D10M2I48M2I14M2D17M13D22M 302/441 68.5% 449/94230402 0.0% 47/441 10.7% 8255014 NA +3605 chr4 + 190214555 27108205 27108204 27108292 88 AAGTATATATATAT-----------ATATATATATATATATATATATATATATATATATATATACATACAGAGAGAGAGAGAGAGACAGAGAGAGAGAT chr4 - 94230402 33398778 33398777 33398876 60831527 60831526 60831625 99 AAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAt ..:....:.:.:..-----------.....x..:...x..x.x:.:.:::.:.:.:....:.:.:...:.x.x...................x...x.. 14M11I74M 63/88 71.6% 99/94230402 0.0% 11/88 12.5% -6290573 -87939829 +3212 chr4 + 190214555 27108211 27108210 27108277 67 ATATATATATATATATATATATATATATATATATATATATATATATACATACAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398869 60831534 60831533 60831600 67 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGA .....x..:...x..x.x:.:.:::.:.:.:....:.:.......:...x.x.........x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -6290592 -87939810 +3472 chr4 + 190214555 27108215 27108214 27108285 71 ATATATATATATATATATATATATATATATATATATATATATACATACAGAGAGAGAGAGAGAGACAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x..:...x..x.x:.:.:::.:.:.:....:.:.....:.:...............x...x.x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -6290588 -87939814 +3407 chr4 + 190214555 27108217 27108216 27108298 82 ATATATATATATATATATATATATATATATATATATATATACATACAGAGAGAGAGAGAGAGACAGAGAGAGAGATCTGAAA chr4 - 94230402 33398803 33398802 33398884 60831519 60831518 60831600 82 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatggga .....x..:...x..x.x:.:.:::.:.:.:....:.:...:.....x.............x.x...x...x.x:.x..::. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -6290586 -87939816 +14720 chr4 + 190214555 27111785 27111784 27112165 381 TGCCAATTCTGAGTGACAACTGT---CATCAGAAATTCAGGCCCTT---TGATGTCTGCATTGAAATCCCACAAACTGTCATGGTTAAAGCTGTG--CAGAAGTTCTAATTACTATGCATAGCTTGCACATAACATAAATAGTTGTAACCTTTCTGCCAAGTGCAAAGTCAGGAAATGTTAATCCATAGGGAAGCCATCCCTAGGCCACGGCTCC--------AACCTGATCGGTAATTCTTGTTCTTGTTCTCTGATTTAAAAAAAAAAAAAGTGATTCCTCTCTTTACACTAGCTGAGTCTCTATTATGCTGTGTGTACATTAGTAAAATTGATCTCCATAAGAGTTCTTCAAACTGAATTACTTAACAACATCGTTTAGGGCTGGTGCAGAGGG chr4 - 94230402 18847590 18847589 18847980 75382423 75382422 75382813 391 TGACAACTCTAAGCAGCTACTGTTGACATTAGAAATTCAAGGATTAAAATGGTATCTGCATTGAAATGCTAACAAGTGTGATGATTTAGACTGTGTGCCCTGTTTCTAATTATTATGCATAGCTTGCATATAGCATAAGTAGTTGTAACCTTTGTGTGAAGAGCAAAGTCAGGAAATATTAATCCATGGGGAAACCATCACTTTTCTCTAACTTCCACATAGAAACTCTATCTCAAATGATAGCTCTTGTTCTCCAGACCGGGGGAAAAAAA------TATCCACTTTGCTTTTGAATATCTCCTTTTATGCTGTGTGTGCATTAGTCAAATTGATTTCCATGAGAGTCCTCCAGGCTGAGTTATATAACACTATCATTCAATGCATCTGCAAAGAG ..x...:...:..:::.x.....---...:.........:.xx:.x---..:.:.............x.:.xx..x...x...:..x.::.....--.xxx:x.........:...............:...:.....:..............x..:x...x...............:.........:.....:.....x..xxx.:x:::..:.--------...::x...xxx...xx.x.:..........:::x:::::::.......------.x::.x....:.x:.x.xxx.x:::..x.............:.......x........:.....:.....:..:..::....:...:x.....x:...:..:.:x..xxx....:..:. 23M3I20M3I46M2I118M8I49M6D119M 265/375 70.7% 391/94230402 0.0% 22/375 5.9% 8264195 NA +3110 chr4 + 190214555 27143735 27143734 27143782 48 TTCTATTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTC chr4 - 94230402 5847642 5847641 5847689 88382714 88382713 88382761 48 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTC ......x...............:.::.........x:xx......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 21296093 NA +3009 chr4 + 190214555 27175754 27175753 27175832 79 CTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCTTTTCTTCCTTCCTTCCTTCCCTCCTTTTTCTTCCTTTC chr4 - 94230402 93005114 93005113 93005192 1225211 1225210 1225289 79 CTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCTC ..:x:.......:..:x.........x.xx:.x:.:...:......x......:x....:x...::xx.:..:::.:.. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -65829360 -28401042 +3023 chr4 + 190214555 27175786 27175785 27175851 66 CTTCCTTCTTTTCTTCCTTCCTTCCTTCCCTCCTTTTTCTTCCTTTCTTCCTTTTTCTTTCTTTCT chr4 - 94230402 2453080 2453079 2453145 91777258 91777257 91777323 66 CTTTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTTT ...:::.x....:.....::.:.......:x...::.:...x....:...:..x..x...:x..:. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 24722706 NA +8318 chr4 + 190214555 27181966 27181965 27182213 248 CTTTTTCTAAGTAAAACTCAATGTTTTGTCATTTCGAGAAGACATTTAAGAGTCTAAATATATGCTCTTTCTTACTACAATTGCCACTTTATTGCTTGGGAGAAGTTTATGTAAGATATTTAAAGAAAAACAGCAGATTGATCCCCAAGAGGAAAATAACATTTTTCTGTAAACCATTTTCACTGCAAACCCTGAAGTGTAATTCTTCTGGTGTTGCTTTTACCCTCTAGGTTCCTGAATGAATTTAG chr4 - 94230402 18878172 18878171 18878408 75351995 75351994 75352231 237 CTTTTCCCAGGTGAAAACTGGTAATTTGTTCTTTGGAGAAAAAAC--AAATAACTAAA---ATGCT-TTCAGTACTAGAATTACCATTTTACTGCTCTGGAGCTGACTATGTAACACATT-AAAAACAGAGAGCAGATTAATTCCCAAGTGTAAAACAACCTTTTACTGTAAAACATTTTCACTGCAAGCCATGAAGTTAAG---TTCTAGCTCTCTCTCTCCTTTTTACATTCCTGAAT-ATTTTAG .....:.:.:..:...x::::.:x.....:x...x.....:.x.:--..:x:x.....---.....-..:xx.....x....:...:....:....:x....xx.x:.......x.:...-...:.x.:.x........:..:......x.x....:...x....x.......x..............:..x......xx.:---....:.:x:.x::.:.x.::.:..x:.........-.x..... 45M2D11M3D5M1D53M1D81M3D35M1D7M 169/237 71.3% 237/94230402 0.0% 11/237 4.6% 8303794 NA +14793 chr4 + 190214555 27185469 27185468 27185782 314 TGGGAATTAGTTCAATTTGTACCCAC-----TACGATTGTGTGAGCATGTTCTAACGTGATTGACAGCACACAATATATTGAGATCTTTTTATTCCCGGTATTAATATAATATGAACCGTGAGAAGATTAAAGCCTCATTTACATAACCTGAGATAAAAGGAGGTGAAATATTGTAATTATCCTTTCAAGCTAAATTTTCACTGCTATTT-AAATTAACCTATGCAAAGAGCAAGTTAACTCCAAAGAGAGCTCTTGCCCC-----------ATAAAATCTACTTGTGAAATCAAGAGTG---TTTATAAACTGGTCAGTCAGTTAGCCATTTG chr4 - 94230402 18880426 18880425 18880753 75349650 75349649 75349977 328 TGGAAATTAGCATGATTTGTACCCACATGCCTTCATTTGTGTCCAC-TGCAATCAAGTGATTGACAGCATAACATAAATCGAGATTTTTTTTTCCT---TATTAATATAATATGAACTGCAAAAAGATTAAAGTCTCATTTACATAACCTGAGATGAAAGGAGGTGAAATATTGTAATTATCTTTTCAAGCTAAATTTGTACTGCCATTTAAAATTAACCTATGCAAATGACAGGTTAAACCCCATGAAAGCTCCAGCAATGTTTGAAAAAAATACAATCAATT--TCAAGTTAGGAGTGTGTTTTTTATGCTAGCCACTCAATTAGTCACTTG ...:......:x::............-----.x.:x......xx:.-..:xx.x.x.............:.xx...x..:.....:.....x.:.:---..................:.::.:..........:.....................:..........................:...............x:.....:....-.................x::..:.....x:..x.x..:.....:x..xx:-----------...x....x.:.--.x..:.:.:.....---...x..x:..:.:..x...:....:..:... 26M5I15M1D49M3D111M1I50M11I12M2D14M3I31M 243/308 78.9% 328/94230402 0.0% 26/308 8.4% 8305043 NA +15989 chr4 + 190214555 27199824 27199823 27200682 859 ATTTCATTTGTAATAAAACTCTTGCAAAAGGACAATAATAAAGTCAT--AAAAGACTGGCTATCTAAAACATTACTCTAGCCATCATCTTATTCATTTTCAATA--TCAGCCTGGGATTTCTCATTT----AAAAAGGGATAAGTCTCATTAAACAAGAATCCTGAGACAACC----AGCGTGCAATATATATGAGTATATAT----------GCATTTTCTTTCATGTAGTGATGATTTGTGT----GTTTAATTTTTTA---TCTCTAATAAAGAATTAAATTGTTTAGTGACCTGAAAA--TTGAAAATTTTCCCTGTA--------CCAAGACAAAAATGATCATTTCCGGACTGAGTGTGAATAAATGTTCCCTG-GTTATCACTTTAGTTCTTCACCAGTTGAATGTCAGAGTTGTGTATTTTCC---TGATTATTAGTCTAGGAAATGA-CTATGTGCTGTTATGCTTCA------CAATTAATACTCAGACTGTTTTGAAAGAAAGATAATTTGGTGTTTTGAAAGGGAGATAATTTTGTGTTTTCTGGCTCATTCTTCAGGGATAAAAGTAAAGTG----------GAGAATATGCTCTTCTAGTCTTTATTGCAGTGGAGACAGAAGTTGATTAATTAAGTTGTCACCTAACTATAAAAAACCCATGTCAGTTATTTTACAACTTTAATAAAGTTTTTAGAAATTTACATCAAAATTTTAATCAACATTACATGTATTATTTATAATACCCGGATAGTATCACTGTGGTATATTTATAAGCATTGTGCACTGGTGCAGAATTTCAAACTTGATTCTTCATTAAATTTTAATTCCTGAACTTAGCTCCTCTAGGTGAACACAGATAGGAAATA-ACAAAGTCCTCACCCA-TCTTGGAAAGGAAAATGCTTT chr4 - 94230402 18884841 18884840 18885700 75344703 75344702 75345562 860 ATTTCATTTATGTTGGAATCAGTTGCAAAGGATAATGATGAAAACACTGAAAAAACAGTGTGTCTGGCATGGTGCTTAAGCCACAATTTCATTTAA---CAATAAGTCGAAACACACTGtttaattttattaaaaaaaaataaaGCAGAATATAAGAATATTCTTCATTAATACTTAAGCATG--------ATGATTATTTACAGATAGCATAGAATTTTCCTTTCCAAACTGAC-ATTTTTGTTTAGGGATAATTTCTAAAGGTCTGTGTT------TTAATCTGTCT-GTAGCCTGAAAAATTTGA---TTCTGACTGTATCTACAAGCCAGATCATAGACCATCAGT----AATAAAGGATGAA--GGCATTCTCTGAGTTATCACTTCAGCACTATATACACAGTAGGTCAGAGTCTGAAACTTTCTGATTAATTACTAGTCCCGATGATGCTCTATGTTTTGTTGCCCTTCAAGCTTGCAATTAATATTCAGACAGTTGTGAAGGGAGCATAATTTGGTGATTT------------------------TCAGTTTATTCTTCCAGGAAAAAAAAAAAAAAAGCAAACAAAGAGAATACATATATCT--CTTTTACTGCAGCTCAGA-ATCAGTTGGTAAATT--TTTGTCTGC-AACAGTACCCAGTCAATGTCAGTTAGTGTACAACTTTATTAAAGTTTTTTAGAATTTACAT---AACTTTCAGCACCATTGCATGCATAATTTATCATGACGATGCAGTATCGTTGTAGGGTATTTATAAGCTTTGTGCAGTGGGGCAGAATTTCAAACTTGGTCCTTCATTAAATTTTAATTCAACAACTTAGCAAAGCTAGGTGAGCAATGATAGCAAGAACACCAAGAGCTCTCCCAGTTCTTAAAATGTAAATATTTT .........:.:x.::..::xx.xxx......:...:..:..:x..:--....:..x.xx.:...::x.::x.:..:x.....:x..:.:...:.x---.....--..::xx::x:x.x.:.x....----.....:::....:x.xx.x..x.x:.:x..:..xx:x:..:x----...:..--------....x...x..:----------.x......:..:x::x.x...:-....x...----.xx......:.x.---...x.:x.------....x:...:.-..::........--....---..:.xx.....--------...::x..x.:.:x....x.----:.:x:..x:....--::::...:...-..........:..:x..x:.:xx::x.x.x........:xx:x.:....:---.:....:.....:x.:x:...x-......x:....::x.....------.........:......x...x....:.:.:x...........x...------------------------:::.:.:.......x:...x....:x...:x:----------.......:::x:x...--::....:.....:xx...-.xx.....:.x....--x.....xx.-...x:..xxx.::.x..........x.x..........x..........x::.........---..:...x.x..x....:....:..x......x..:x.x:x::......::...:.x:...........x.......x...x.................:.:...................xxx........xxxx........:..xx.....x..:x.-..x...xx...x....-.::.x:...x.x....::... 47M2I47M3D5M2I21M4I42M4I6M8D12M10I22M1D8M4I13M3I8M6D11M1D12M2I4M3D11M8I20M4D13M2D11M1I50M3I22M1I20M6I46M24D32M10I16M2D18M1D15M2D9M1D61M3D159M1I16M1I21M 542/798 67.9% 860/94230402 0.0% 123/798 15.4% 8314983 NA +34840 chr4 + 190214555 27206729 27206728 27207739 1011 TTTGTGCTTGTAAAACGTACATTGATGAGGAAGAACCTGCTGGCTCAGAAACCTTCCTGGAGTTGTGCTGATGAAGGATGGAGTTAACCTTGCTTTACCTTTTT---GAGGCCTGAAGAAAGCCTCATGACCGAGAAGTCATATTTAATTTTATTTTCTATTCAGAGCTGATACCTCCTTCTCTCTGTCTTTATTTTGCAG-------------GCTCTCTGTTGATCTGGCACAAGTGTGCAGGTTT---TTAAAAACGATGATGTTATCTGTTTACTATTCAAATGCAATTTTAAATGGTTCAGCTCAGCACATTTGAATAAAAAATCCTATTAAAGATGCAATATTCCTCTGCTACCTTTTCGCTGAGTGCATTTGCATGGCATTCCT---TTCTCAATTGGAATATAATACTATATACCTGTTCAGAGTGATGTGATTTCCAGCATTGAATTTGCAGTCGTGAAATAGGCTGTTCACCTTCTTATCATGGAAATTTGGTATTCATGCATAATTTTCTCCCTTACATTTACAAAATACATTATTAGCCACGTGTTTGTGCCCTTGCTCTGCTCTATAGCGTTTTCATTTGAAATCTTCCAAATTCTTATTTTTG-CTCCTACCATTTGATAGAAATCATGA-AATTGCTGAGTTAAGATAAGCACCCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTCCTAAGCATGATTGGGGATAGATAGGAATGAGAGATGAAGAAAGCAATGAAGAAAGAGCAAATTGATCATTTACTTTA-----AAAAGTTCTGACCACTGGCTTGATGAGAAGCATCTTTAATTTTAAATATTTTGCATCTACTTAACTGCCTAATTGCATGGTTAAATGAGCTGTAGGAGAAAGATCGCAGCTAAAACCTTTGATCAATTTCAGCCAGTTCTAGAACACTGATGGTAACACCAG---GCT-------GTGTTTCTCCTCTGGTAATTTTGAACTTCTTCAGAGAGCCCTGTTTATTAAGCAAGGCAGACTTTCTGCTTGGGCAGCATTTTCCAATTAC chr4 - 94230402 18887556 18887555 18888527 75341876 75341875 75342847 972 TCTCTGCTAGAAATAGATACTGTGATGAGAAGCGACACTGTGGCTTTGAGACTTTCTTTGGGCTGCAGACAAAAAGAACAAAGTTAACCTTGTTATATTTTTCTTCCATAGCCTGAAGAAGGCCTCATGGCTGAGAATTCTCTTCTCATTTCTATTTC----CAGGGTT--TATTTTCTTATCC---TCTTCATATAAAAGAATGGATTATATAGCTAGGTGTTGATCCAGCA-------GCTGGTTTGTTTTTTAAATGAAAATGTTATCTGTTTATTATTCAGATACAATTTTAAGCAGTTTTCCTCAGCGCATTTGAATTCAAAATCCTATTAAAGATGCAATATTCCTCTGCTACTTTGTCCCCCACTGCTCTGACACTGAGTTTCTCTATTTTAAATAGAAATATAATATTGTATATCTGTTCAGGGTGATGTAATTTCCAGCGTTGAATTACCAGTCATTGGACAGACTGTTCACCTTTCTATCTTGGAAATTTTTTATTCATACACATTTCCCTCC---ACATTTACAAAATGCATTATTGGCCTGGCTATCTTGCAATTGCTCTA--CTGCAGCACTTTCATTTTAAATCTAGAAAACCTATTCCTTTGCCTCCTTCCACCTGATGGAAGTCATGAGAATTGCTGAGTTAAGATAAACACCCTCATTTT--------------------------------------GAGGTAGA-------GAGAGGAGGGGAAAGAGAAGAAAAAA--------TGTTAATTTGTTTTAAAGTTAAAAGTACTGACCCATGCACTGAAGATAAGCATATCTAATTTTAAATCTTCCATATCTATTGTAATGTCTAATTGCATAGTTAAATGAGCTGTAAAAGCAGAAATGCCGCTGTAACCTCTAAACAATTTTACACAGTTCTAGAACATTTGAGATAACAAAAGAAAGCTTAAAGAAGCTTTTCTCCTCTTATAATGCT--AGTACTACAGAGGATAGAGTTTATTGAACGAG--AAGCTTTCTGCTTGGACAGCACTTTCCCTTTAC .:.x....x.x..x.x:...xx.......:.:x:..x:xx.....:x..:..:...:.x.:.:..::xxx.x:...:.:::...........:.x..::...:.---:x:..........:........:.:.....x..x:x.:.x....:xx....----...:.:.--..::.:...x..:---....:..x.x:x..-------------...xxx........::...-------..x.....---..xx...:..x:..............:......:..:.........:::...:xx......:.........xx...................................:..x..x.:x.x...x:.x:..:x.x:..:..---..:.x...x.:.........:.:....:........:.......:.........:.......xx.....:.x::.:..:...........::....x.........xx.......:..:.x..::....---.............:.......:...xx.:xx.:x...xx.......:--..::...::........x......xxx...:::x.x::....-.....x...::....:...:......-...................:......:x:...--------------------------------------.:.:....-------.....:x.::.....x:.x...:...--------..x.x....::....-----......x......xx..xx:...x..x......x.:...........x..::::.....:.xx.x..:..........:...............::..x.::.x:..x...:x.....:.:.x......:.xx.............:.x:x.:.....xx..---...-------.:x..........x:....x:.--.x.x..x.....:::xxx.......:.:.:..--.::............:.....:.....xx.... 104M3I51M4D7M2D13M3D14M13I19M7D8M3I140M3I129M3D47M2D42M1I26M1I32M38D8M7D26M8D15M5I162M3I3M7I22M2D32M2D33M 681/933 73.0% 972/94230402 0.0% 117/933 12.5% 8319173 NA +3627 chr4 + 190214555 27233658 27233657 27233726 69 AGGATTCCAGATGTTCCTGTCCAATCCCAGGATGAGAAATGTCAACTGATGTCAACC-CTGCCAAAAGAT chr4 - 94230402 18896832 18896831 18896901 75333502 75333501 75333571 70 AAGGTTCCAGATGCTCCAGGAAAATCCCATGATAAGCAATGTCAACTGATGTCAAATGCTACTGAAAGAT .:.:.........:...x.xxx.......x...:..x..................x:-..:.::...... 57M1I12M 54/69 78.3% 70/94230402 0.0% 1/69 1.4% 8336826 NA +9633 chr4 + 190214555 27242990 27242989 27243253 264 TCACCTGCTGTTTTATTACACATTTTCTCATAATTGCTTTTGTGTAATCAGGTTTTGTAGGATAAATAAAAAAATGACTAGTCATATTTCAAGATATGGAATCCAGGGAGCACCTCAGCATTATTTTAAGATTAT-TTAAAAATGGATTAATTGCATCCTTTTCTTCCTTCTCATAACAATATTTTCTCATTAGGCTGGATTTATTTATCACATTGCTTTTCGTGTT-GTAGTTTTTGCCATGT--GAATGAATTAT-AGACTTTTTCA chr4 - 94230402 18898250 18898249 18898514 75331889 75331888 75332153 265 TCAAATACCACTTTATTAGGCAGTTCTGCCTAATTGCTTTTCCGTAATCAGGAACTGCTGGCTAAG-AGAGAAAGAACT-GTCATATCTTGAGATATGGTATCCAGGGAGGTCCATATCATTCTTATAGGATTATATTAAGAGTGGATTAATTGAATGAGTCTCT--ATTCTTATTACAATCTCTCCTTATTAGAATGGATTAATTTATCACATTTTCTCTCCTCTTCACCGTCTTTGACATATAAGAATGAATTATCACACTCTTTCA ...xx.:.:::.......x:..x..::x.x...........x:.........xx:..:x..x...:-.:.:...x:...-.......:.::........x..........xx..x:.x....x..x..:......-....:.:...........x..xxx.:...--x....:..x.....x.:.:..:.....:x......x............x::.:..x.x..-::x..:....x...:.--...........-.x...:..... 66M1D12M1D55M1I29M2D60M1I16M2I11M1I11M 191/260 73.5% 265/94230402 0.0% 9/260 3.5% 8344740 NA +16375 chr4 + 190214555 27253818 27253817 27254410 593 AAACATACTTTCTTTAAATAGTGAAAGAGCCTTTTCATTTAA---AATATTTGTTT---AGTGAAAGAAACAGCTCTATCAGTTAAAACAATGTCTTCTGTGAGAGAATCATTCAGCAACATTTCCTGCTCCAGACAATCGCGCTGGTATATACACAGCAAATCATTTCAATTTACCAACTGTTCTGAAATTATCTGACCAAGCAGAAAGCATTAATTCGAATCCTGTTACAAATGGACATTGAAATAGGGTCATGAACCTTGGAGGAGATGAGGAAGAATCATCTTCT-CTCTGATTTGGAATGGTCAC----GTTTATCATTGTTCAGTGTTTTTCCTCTTTTTATTTGTAATTAATGGCACACTGCAGTTCAGGTCTGCTGGTCTTAATCTACAAACTAGGCCATTAGCAGCACCAGTCTGCATGATGGCATACCAATTAAAATTAGGAGATTAAAGAATAATGTTCCTTGCCTGGGACCAGTTCGCATACCAATGACAATTTCCCTGGCTGTTGAATGAGGAAAGACTTAAATGACAAT-GAACTTGGTATCATTACATTTAGGGGACATTAAATGGGTAAGGGGAGATGGGAGGGTAAAG chr4 - 94230402 18901482 18901481 18902046 75328357 75328356 75328921 565 AAAAATACTTACTTGAAATACTGACAG----TTTCCAGAAAGCCCAATATTTGTTTCCCAGCACTAGAAACTGTTCCATCAGTTTTGACAAAGTCATTTGGAAACCTATTCTTCAGCATGATCCCAGGATCT-GTCAATAGTATCTGTACATAAATGGCAAATCATTTCAATTTGCCAGCTGTTCAGAAATCGCTATATCAAGCAGACAAAATCAATCCAACTCCTGTTACAGATGAAAGTTTAGCTGCAGTTAT-----------AGGAAGACGAGGAACCAGACTCTATTCTGATTT-GAATGCTGTCCTTTTTTTATCATTATTCTATGTTTTTGATCATTTTAGTTGTAACAAATGATACTGTTCAGCTTAGGTCTGTTGATCTTAATCTAGAAATCAAGCTACTGTTAGCATCA-TCTGCATGGTGGTGTATCAATTAAAATTAGGAG-----AGATTAATGTT------------CCAGTTTGCTTACAAATAGCAATTTGCTTAGCTCTTCAAAGA-GAGACAGTCAGTTGCTTTTGGGACTCAGTACCATTAATTCTTAAGG----CAACTGAGAAAGGATCATAAGGAGTGGAAAG ...x......x...x.....x...x..----...:..xxx.:---...........---..::xx......x.:..:.......xx:....x...x.:..x:.:xxx..:x.......xx..::.xx.x..:-.x....x.::::x...:...x.::.................:...:......x.....::::xx.:........x.:x..:...:.:.x..........:...:.x:..x.:x.:x:..:..-----------::..x..x..:...:..xx:...-:........-.....x.xx.----x.........:...x:.......xx..x.....x......:x....::..xx.x...:.:.......:..:..........x...::.:..:.:.:x:....:..-........:...::..:................-----...x.......------------......:..x...x...::......x.:.:...x..x..x..-..:.x.x.:.:x..x:xx.-.:...::...:.....xx.:.x::..----:..x..:.x....:xx:xx:....x.x.... 27M4D11M3I11M3I73M1D122M11D23M1I9M1D10M4I105M1D33M5D11M12D42M1D19M1I26M4D31M 384/553 69.4% 565/94230402 0.0% 52/553 9.4% 8352336 NA +7023 chr4 + 190214555 27260174 27260173 27260397 224 TTTCATAATAACCATGAAAACAAAATTTTCAATAGGAGTTAATCGTGGCTTGGATAGGTATAAATGTTAGTGACTGGAACAGATGAGCATCTCCTTTTAAGATAATTGCTTGTAC---GAACGATGAACAAGGACATCTAAAAGCCATTTCATGGGGAATTTTTTCCATTGACTCTTTGCTTGATTTTAACTACATGCAAAAAGCGCTTTAACCCAGCACCTTGGAA chr4 - 94230402 18903336 18903335 18903546 75326857 75326856 75327067 211 TCTCCAAATAACCATAAGAATGTAATTTTCAACAGGAGATGCTTATGTTTTGGACAGTTAGAAATATTAGTGTCTGGAACAAATGAATGAATCATCTAAAGACAAACCTTTTTATCAGTAGTAATGAACAAATATATTTAAAAGACATTTCATGCGTAA-TTGCTCCACAAACTCATTTCCTGGGTTTCACG---------------TTTAACACAGTACCTGGCAA .:..xx.........:.:..::x.........:.....x.:x.::..x:.....:..x..x....:......x........:....:::xx..x.:.x....:..x:x:..x..:---x.:::........:x.:..:......x.........x.x..-..x:....:x:....x..x.:..:x...x..x---------------......x...:....x.x.. 115M3I41M1D32M15D20M 144/208 69.2% 211/94230402 0.0% 19/208 9.1% 8356838 NA +39998 chr4 + 190214555 27271984 27271983 27273609 1626 CAATGATGCTACTTTATTATGAATTTCTATCAGTTGGATAGACTAAAATTAACATTTGATGACTTCTTCATTGATATCTGACATTTTTTCATAGGCAGACTCTAATAAAGAAGTCAGTTAGAGCTATTAGACATATTTTAGAAGAATT----TTTGGTGCATATCTTCACTTAGATTATGAAATTTAAATCATTGCTGCTATCAGTTTGAATGCTAATGATATAGCCTGCCAGATGGAAACCTTTCATAAATTTTCACTTTTCTCTTA-CAGTGGGTTGTAAATCTTAAGTAAATGACTTCTTGGGTGAACTATGTTGATGTCAGCTTTAGTGCCTTATGTCCACACTAATTTCAATGTCATAAGTACCTGGAAGGCAGGCAACTCTTAATTAAATGCCATTTTCTTTGTGCATTATTGAGCTAGAGCAGAGTGCAGACTCTCCTTACATTGTCTGTGGCTTACT--GGAGAATAGCT--CTGCTCTCGCTTTGTCACAAGTGGGTTCTTTTGGAGCTATTTAAATGCTTTGGTGT-CATGCAGCTTCTCCTGTCTCAACTAAAACTGTCTCCCTCAATGTGTCTTTCAGA----GAGTAAAACACTGT-------TTCCTTAGCCTTTTGTT----------------CTCCA-----------TTTTGACAAAACACAT----------------TCTGTAGGTTCTTGCCTTTTTTA-----ACAATTTTTTTCC---TCCAAAAATTGATGTTTTAGTTCTCTT---CAGGA---GTGCT---------AATCTCCATATGAGAACCACACTGGATAAAACT----------------------------------------CCTTTTTTCCCTATGGGGTTATATCAGTATTCAGA-------------------CTAAATCTTCTGAAGGACTTTTCTACCAGTTATGAAGAGTTCTGATA------ACTTGTGCCTGCTTATTACTTAGATTTCTTGGGAATTTTTTTATTACAAATATTTTTTTT----CATTT---AAAACTGAGCCAAATTTT-------GAAAAATAT---TATCACT----------TAT--------------------TTTTTTTTTT----------------TAAACAGCAGACAAA---ACATAAAATTAAATGAAAGATTGTTCAAACTTTTTATTCCTTGGAAGCCCAAAGGAAAGAGATGATAAAATCACAAGAAAAATACTTAGGTGAGCCAATAAATATTCCCAGTAGAAATCTCAGAAAT-CCTACAGGTAAAACAACTTTTTCCAGTTATTGAGTTATTTTCTCAGCAGT-TGTTT-ATTTATTGATTTGTTTTGCCA-TTAAACCTACAGACCAAGTGATAAATGTGCTTCCTCTGTTGTTACAATGTAATGCATTGAGCTTTTCTTGAAGCTTCATTA---AAATTAT-ATCTAAAGCACCGATTATAAGAAAATGATTAATAATACAATAACATAGAGCAACTGTTCTGTGGGGCTGCTTGGAGTTACGAGTTTTTCATCAACT--CTGTTTTGTTCTCTGCTTCTATCCATGCAGGGAAGCAAACGCTCGTCACCATGTTTTCTCATCAAGCAACAGGAACCATCA-TTCTGTAGAAACAAAGGCACCGACAAAACATTTCCAACCATTAAAATA-ATTTTCCAACATGGTTTCAGTAATTAGTGTATTTCATTTTCAACAACTATAATTAAACCTGACCTTTAAGCTAATTATATCTTGACATTTATGATTTTAAACTGGCTTTCCCTGTGGTGACAGTGTGTTAGATTCGGGTTCTAATGCACAGTTT-TGTAGTAT chr4 - 94230402 18912169 18912168 18913912 75316491 75316490 75318234 1744 CAAGGATGTTATTTTAATGTGAGCTTCAGCTAGAAGAACACACTGAAATTAACATTTGATGTCTTGTTCTTTGATATCTAGCATTTTT-CACAGGCAGACTATAATAAAGAAGTCAGTTACTGCTATTAGACATATTTTAGAAGAATTCTTTTTTGATGCTTATCTCCACTTGGATTATTAAATTTAAATCACTGCTGCGATCAGTTTGAATACTAATGATATGTTCTGCCAGATGGAAGCCTTTAATAAATTTTCGCTTTTCTCTTAACAGTCAGCTGTAAATCCTAAGTGA--GATTTTTTGGGGG------GTTGATGCCAGCTTTAATGCGTTATGTCCGTGTGGATTTCAATGGTGTCTGTACCTGGGAGGCAGAGAGCTCTTAATTAAATGCTATTCTGTTCC--CTTCGCTGAGATGCACAGTAGCACAAACT-TCCTTATTTTTCCTGCTTTTTGATATGAAAAATTGTGAATGGTTCCTGATCTGCCA------------------GCCACTT---TCCTTCTGTATGCATGCAGTGTGCCC----------GAGGCTGTC--CTTCA--GTGTCTTTCAGCTGACGTGTATTCAGCTGTGGTCAGACTTTCCAGCTCTTTGCTGTTGCTGTACTCGAAACTCCAGGTACTGGAACTTGTGA-AAGACAGATGACAAGGAGCTGCCTACTTGTAGGTATATATCTCTCCAAGTGGCATAAGTCTTTCCTGATTCTAGGCAGTT-TGTACCAGCACCCTTTCACAGGACCAGGGCTTAAGTTATGACTCAGCAAATCAGGTGCAGGATGGAGGAAACTTAATAAACCAGTTTGTTTCTATTGCTAGTACATTTGGTAGCCTCTTTTCATCAGCTAGCAATATTTTTGTCCAGAGTCGTCTGTTACATTCACTTTTAGACTTCTGAA-----TTTTT-----TTGTGCACGGTCCTTACAGTAAAAATCTGTGC-----TGTTACGCGGATTTC-----AACTTTGCATATATTAACCTTTTCTCTGCTGCATTTTACCAAGCTAGGAAAGGTTTCTTTAGGGAAAAAAGATGCCTATCACTGTACACAAACTATAGGAAATGGTAAGCTGGAGGTCCTGGCTGTAGTAAGGAAGGGAGAATAAACACTAGGTAACTGCAGAGAAAATGAAATCACAG--CACTCAAACTTTCTGTACCTTGAGAG----AAAGAGAGAACT---------------AAAATACTTACATGAATCAATAACTATTCCCAGTAGAATCCTTGGAAAAACCTACAGGTAGAGCAAATTTTTC-AGTTATTGAGTTATTTTCTCACCTGTCTGTTTCACTTATTGATTTGTTTTGTCAATTAAACCTAAAGCCACACAGTAAAATTTGCTTCAT--------------TCATGCACCAAACTCTCCAAATAATTTCATTATCTAAATAATTATCTGATGTGCCAATTACAAGAAAGTAATTAATAATATCATAACGCAAAAAACAAGTTTTGTTGAGT--ATTGTGGTGGTGCTTTGTTCTTTGATTTTCTGTTTTGTTCTCT--CTCAGCTCTCTCAGTAAG--AAATGCCCATTGAAACATCTCC--ATCATGGAACAAAAGATGTCAATTACAGAAAAGTATGAGCATCAACAAAACATTTTAAATCATTTTAAGACATTTTCTGACATAGTAATGGTAATTAGTATATTTCAGTTTCAACAACTGTAATTAAACCTGACCTTTGAGTTAATTATGTCTTGACATTTATGATTTTAAACTAGCTTTCCCTGTGGTGATGATGTGTTACATACAAATGCTAATAAGTAGTTTCTGTAGCGT ...x....:..:....x.:...::...x:::..xx.:.:.x...:................x...x...x.........::.......-..:.........x..................xx..........................----....:...x.....:.....:......x............:......x............:..........:x:.............:.....x..........:...........-....x:.:........:.....:.--..:..:.....x.------.......:........:...x........::::x:.........x::.xx........:......:x.:...............:...:.x..:x--.x.:::....x.:x.xx:x..::..:...-......:x..x:...:xx:..:x.--.:.:...x.:x--:x.:..::.x.:..:..------------------..:.:..---.x...:x..:.-.......:x.x:..----------:.::.....--.:...--...........x----.x...xxxx:....-------:.::::...::....:.----------------.....-----------..x...-..:...x..----------------::.......x:x.::..:.::x.-----.:..x.:...:.:---..:.::x.x.x-...x::..:x.:...---.....---.x...---------.x..xx..x..x..:xx..x:x....x:.....----------------------------------------...:.....x::.xxx:.:x....:xx.:.:....-------------------:.x.:x........-----...:.-----..:..x.x:..:..x.:.------.::.....-----.:....x::......-----..:...x:xxx..:x..:x....:.:.----.....---x..:..::.xx.::...:-------:.....x..---.......----------...--------------------.::.xx:.x.----------------......x:..::..x---.x.x.....x....x.x..--:::.........:.:.x.....::..----..:..:...:x.---------------..........x:...::......x..............x:..::....x-..........:.:...x......-.....................x.x..-.....-.:................:..-.........x..x.xx.xx.xx....x......x.--------------.x.....:::.:..:.:.xx:x.::.......---....x..-....:.x.::..:....:......:.:..........:x.....::.:.:x.xxx...:...x.:.:--x...x:..x::.xx..x...x.::.:.--..............--:..x:::.x:x...x:.:--...:..:.:.::xx.::.:.:.--....x.x....::.:x::...-..x::x.:..::.x::...:.:...........:x..:....xx..x.-......::....:..xx::.........:.......x...........:..................:..:.......:........................:................:::.......x..x.:::.x.....:x::.....-.....::. 88M1D59M4I116M1I24M2D13M6D95M2D29M1D24M2I11M2I17M18D7M3D11M1I14M10D9M2D5M2D12M4I14M7I17M16I5M11I6M1D9M16I23M5I13M3I11M1D15M3I5M3I5M9I33M40I35M19I14M5D5M5D18M6I8M5D15M5D27M4I5M3I18M7I9M3I7M10I3M20I10M16I15M3I19M2D26M4D12M15D49M1I23M1D26M1I5M1I21M1I35M14D32M3I7M1I67M2D27M2I14M2D18M2D22M2D21M1I48M1I154M1I8M 1094/1513 72.3% 1744/94230402 0.0% 344/1513 22.7% 8359815 NA +16033 chr4 + 190214555 27276736 27276735 27277722 987 TGACCAAAGTCTTTACATTTCTGTGGTAACAGCTTATTCTTTATCAGTAATGATCTTTCTGGGGCCATTTGATTTGACTGTGCAGTGACACATGATATTTGGATAAACCAGGATTTATTTCCTCTTTAGCT-CTGCACATGGAGTTTGGTGACACGTTTACAAGA--GATCACCTGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTCAAACAGAGAGACTTGGCCTTGAGGAGCCCATTTGAACCTCAACT-CTTGACCTGTTCATTGACTGTGTTGGCTAATTGGGTCTTCAGTGCAAAGCAAGAAACAATGCTCAGCTTTGCTAACTGTCTGTGTAGCCAGAACATGAAAATCAATCTACCGATGACCAAAAGGGCATAGCAAACAACATCCCTGTGGAGTTGGGTGTTTTTGGCCTTGGCGTTCCACAGATG---------------TGACCTGA--GAAT--------------------TCACACAACTTACA--TGAAGATGCAATTCATATAATTAATATGTTCACTGCATGAAGA--TTTTATTCACCATAAGTTGGGATGGTGAGAGACGGACAG-AAAACACAGAAGCCC--GAGGTAAGTAG--AAATGTGACCCATGAAAGCAGTTTGGGTTCAGCTGAAAAGA-------TTTTGCACATTCTGATATCATTGAATTGTATTCTTTTTTTTTCCCCCATCAGTGAGATGTGAAGGATTTTACAGCTTGTGAAG-------GAA--AATAAATCATATGAACACAAAACAAAAAAAATCCACCTCTCTTTGGATACATTCCTTGGTTTAACTCCAAAGAAGTAGC-TTGTGTGGCTTCTCCTAAAATGTGTGAAATACCACCTGGCTGGGTCCCAGGGAAAAAACCAACTTGGGGGTCCCTGAGTGCTGAAGTCTCCTGGCAGCTCAATCCTTGTTAGTATTTGAGATAAATAAAACAATTGATCTTATCTGAAAACTGCATAGAAAGTAAGAATGTTTTTATTACATTGAAAATGAAAAAAAAAAGCTCTTGACTTTTTT chr4 - 94230402 18915420 18915419 18916313 75314090 75314089 75314983 894 TAACTTGATTCTTTTATTTCCTGTACTAAAA----ATTCTTCAGCA------AGCTTTCTTAAGCTGTTTACTT----------------------ATTTGGATAAACTATAGTTTATTTTCTGTTTTGTTTCTGTACA--AAATCT--TGACATGTTTTTGTGGTGGGTCACTTATGGTGAGGA-AAAGGTCAACAGAAAGTTTAACAGACTGAAAGGCCTAGTCTTGTTTAGAATACCTGGACCCCAGCTGCCTGACCTATTCATTGACTGTATTTTCTAATTGGGCCATCATTGCTATCCAACCAGCAGTGT--AATGTTGTTAACTGCTAGTTTAGCCAGAACACAAAAATCAATCTGCCAGT-----AAAGGGCATAGCAAGCACCATGCCTATAGAGTATTGTATACTTGGCCTTGGAATTCAAAAGGTGCTTATTTGTTTCTGCTGCTTTGATGGAATACTGTAGATTTATTTCCAAACCAAGTGACTCACAGCTACTGATGCTATCTTTTAAATATCTTTTTACATTGCATTAAGAAGTGTTTTT---------------TGATGTAGGACAAACTGCAGAACACATATGTTTAAGAGGTATATGACAAAATGCTGCC-----ATGCTCCTTGAGTTGTGTTGCAAAGAAGAGTTGTGCTGTATATCCTGACGTCTTTTGCCATCGTTACTGCAGTTTTTCCCTTC--TGAAATATAG----CTTTACGGAGCGTGGGATCTACTAGAACTAGTAAAACATATGAAAACAG---------------------------------------------------TAAGTGACATTGTGCAGT--------AAGTATAT----------------------------AAAAAACAGCTCAT---TCTTTTCCTGCATAAGTTTCCTCCTAGCTATGCTGTTTTTGGCATTTTAGAAAAATAAAACAATTGATCTGATCTGAAAACTGCATGAAAAGCAAGAACGCTTTCATCAAAGTGAAAATGAAAAAAATAAGCCCTTGACTTTCCT .:..:x:.x.....xxx..:....:x...x.----......:.x..------.x......x::..::...:x..----------------------............:.x::.......:..x...x.:.-...:...--:.:.:.--.....:....x::x.:--.:....:.:..:......-.......::::.....:.xxx..:..x..:..:.:.:.:....xxx..xx:.::..:...:..:..-.:......:............:..xx.........:.x...x...x.xx...xx.:..:..:--.::x...:......::x..x...........::...........:..::.-----..............:..x...x...:.:....xxx..:.x:..........x:...x.x..:..---------------..x::...--....--------------------:..x:::...:...--.:xx.....x..::x.xx...xxx.x.x.x..:.....x....--.x..x..---------------..:..x::...::..x.-.:......x.x.:::--......x:.::--.....:x:..-----.x..xx:...:...xx.:..x.....-------.x:..:.:..:....::..x..x:x:xx::..x:.x:xx...::...x..--...:..:.::----:.....:.xx:...:::-------...--.:....x........x...:---------------------------------------------------x....::.-.....::.:--------..:.:.:.----------------------------.....x..:..::x---..::.xxx...xx....:....xx:....xx:::x..x..:.:....x...x..................x...............::....:.....:.:...:..:.x.x...............x....:.........::. 31M4D11M6D22M22D35M1I7M2D6M2D16M2I18M1D66M1I62M2D50M5D64M15I8M2I4M20I14M2I43M2I7M15D17M1I15M2I11M2I10M5D26M7I50M2D10M4D17M7I3M2I20M51D8M1I9M8D8M28D14M3D145M 564/827 68.2% 894/94230402 0.0% 227/827 27.4% 8361316 NA +3443 chr4 + 190214555 27288327 27288326 27288402 76 ATTAACTGTGTGACCTTGGGCAAGTTACTTATCCTTCCAGAGATCCAGTGTCCCTATCTGTGAAACAGGATTAATA chr4 - 94230402 11947210 11947209 11947285 82283118 82283117 82283193 76 ACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA .:...............:..:x...:.....x:..x..x.x.x:.....x....:..x.:.....:::xxx..... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 15341117 NA +10896 chr4 + 190214555 27291478 27291477 27292105 628 TTTCAAAACTAATTACTTAACAGAAATTTCGCAGCATAGCAGTGA-CTACTCACCAGGTATTTGAAACTGGTAAAAATCTAACAGCATGGCAACCATTTTGATCATTTCTGTTATTAAATTTGTCTGGACTTT----CCTCTGTATTTCTTAAGAGGCCAGTTTGATTACTTTTTCAGGCATATTTTCATTTGAGCAACCTCAGTTTTAGATTTATTTATTGCATACACTTATTGCTCTACTGATATACAATAAAACCCCAGGCCCTTGAGTGTCGATTGTGCATGAAAACAGTTTTTAATAGAATGAATTCCCA-AGGGGAAGTTAAACAGCGTCTGCTCTTTCCTTTCTTTCTTTAGGTATTTTCTACTTTTCCTTCTTTTTTCCTTTTTTCCCCTAAATCCAAGGCTAACACAGAACAGGCTCCAGGCTCCCTGTGGGCGATTGTGTCGAATTAAATCTGACCTTTTCCAAATTGTCATTCTGGTCATTTGGAAATGATGGAGGTTTGGCCGCACCTGGGCCTGCACTTGTTTAGTTCCCTCTGCA----TCGTGCTCTCTGGCTTCTGTGCAAGGATCTTTTCCATTTACAATAAAGTGGTGTGGATTTGGAAGACTCAGGGATGGCCTGACTT chr4 - 94230402 18923490 18923489 18924050 75306353 75306352 75306913 561 TTTTAAAGCTAATTATATAGCAGGGATTTTGCAAAATATCTTTGAACTACTTAAAATGGATATTAAAAAACTCAAAATCC--TGATATGACAGCTGCAGTAATAATACCTATTGTTAAACTTTGCTAGACTTTTTCTCTCATATATGCTTAAAAATGTCTGTCTTATT----TTTCAAATATCTTCTTCCTTTCATAACTTAAGACCAACTTTTATTTATTGCATATTCTTAACATTCAGTAGCTATGCAGTAAAACCACATGCCCTTGAGTTCGTATTTTATATG----CATAGTTTAATAGATTGATTTCCTACCAGGTGAGCGAAGCAGCATTCATTTTCCTTTATCTTACCTGAACTATGTACTA---------------------------------------------------------CAGGCTTTCTGAAAGCAACTGTGTCAAATTAAACCTGACCTTTTCT-AATGGGGATTCCAATCAGATGGAAACTGTGGAAAATGAGCTGTACTGGTACTT---TTTATGTAG-----ACTGGAAGTTTCATGCCCTTCAGCAGATCTCTAAGGGTATTTTCCA-TTGCAGTATACTGGTGAAGCTGAAGAGGACTTGGAGACAGTTCAAGTT ...:...:.......:x..:...::....:...:x...x.xx...-.....:.xx.x.x..x.x...xx:x.x......:--::::...:..:.:::xx.:..x..x:..:..:.....:..xx..:......----.::x.:...x::.x..:.x.:.x..:.x...----.....:::..x..:.:x:..xx::...:.x..x::x.xx...............:x....x:::..x::x.x...:..:.......x..x..........x:xx...x.::...----..xxx.........x...x....:.-x:..x:..:x..:....:.::::.:.::::.x....x.:.x.:x...x.x...---------------------------------------------------------......::...x::..:.:......:.......:...........:-...x.xx....:::...xx......:x:....::x.x:..:.:..:x.x:.:.---:..:.x...-----x...x.----..:...:..:::..xxx.x.x:....:.x.......-..:..:..x.x.....x:.x.xx:..:....::.:..::.::::.x.. 45M1I34M2D51M4I31M4D114M4D25M1I53M57D46M1D53M3D9M5D6M4I36M1D48M 345/551 62.6% 561/94230402 0.0% 87/551 15.8% 8367988 NA +3351 chr4 + 190214555 27293280 27293279 27293362 83 CTGCAACCTCCGCCTCCCAGGTTCAAATGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.::.......:..x...x.xx.x........:............:.:....x.::.--:....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 9096154 NA +8970 chr4 + 190214555 27306700 27306699 27307135 436 AACTCTTCTATATACCTGCATTTAGACTTAACAACATTGTAGATACAGTGAAGGTGAGTAGTTTAAGGA----TTTCTCTTTCTGTTTGCTTTTCATTTTTTTTTTCTGCGGAAGAGAAATAATTTAAAATTTCACTTTTTGCA---TGAAGGACAATGCCATTCATATCCTCCTGGTTGTATTTTATCTTAAAGACCATAGAGCCTAAATCTTGAACCAC------CTCGAGGGTGGG---AGATACTTCATGAAGC-AGCTGTGTTAA-ATGACAAACC---CATCTAGGTAATTGA-------AACACTTGCTGGATTTTTAAAAAATTGTACTGTGATTCCAATTTTAATTTTTCAGAGACATGTTATACGAGAGATTAAAGGACTCTATTTCAGTGATTCATTTAAATCAATTATGAATAAGTTGACATCCCTGGGAA--GCCTTTGAATATTTTATTATA chr4 - 94230402 18928393 18928392 18928850 75301553 75301552 75302010 458 AGCTATTCCAAATATTCTCATTTGAATTTTAAATAATGATGCTTAAAGTGATAGACAACAGGTTAAGGACGTATATTCCTTTCAGTTTTGTTAGCAAGTTCTTC----ACAGGTGAAAAATTGGTGAGAACATTATTTTTTTTACTGTGAAAGGTAATGACATCAATACCCATGAAGACATTCAATAGCTTAGAAGTTATTGACTCTAGATCATAAACTGCATTACACTTGCAGCTGTATTAAGTTTTTTAATGAAACCAGCCACTTTAATATCAGAAAACGCACAGTCAAGTAAATGATGACTGTAATGTCTGCTAGATTTTTTCT---TTAAACTGTGATTTCAGTTTTAATTTTTTA-AGACTTATTATATGGAAGATTAAAGCAAATTTTTTCAGTGTATCATTTAAATCAGTCGTGAATATGCTGATACCAGTGGGCAGTGTGTTTGAATATTTCATTACA .:..x...:.x...:::x.....::.:..x.x.xx..x:.:xx..x.....x:.xx.::..x.......----.x.::.....x....xx..xx..xx..:..:----:.:.:x..:....x:x.x.:..:x.:.:.....x:.---....:.::....x...:x...:..x:xx:.x::.x:xx..x....:.::::..x..x:...:...x.:...::.------..:.x:.x..x:---..x.x:..x.....:.-...:::x....-..x.x...x.---..x::.:....x...-------..::::....:.......xxx---..:x.........:..:...........:.-....x.:.....:.::.........x.xx:.x........xx............:.::......x.:...:.:.xx....x.--.:x...........:....:. 69M4I31M4D36M3I74M6I12M3I16M1I11M1I10M3I15M7I21M3D30M1D82M2I21M 277/428 64.7% 458/94230402 0.0% 38/428 8.9% 8378307 NA +9680 chr4 + 190214555 27338454 27338453 27338851 398 ATTTTGGGCTTAGAAAGAAT-TACACATTGGCAAAGCTCTTCTCTGTTCTAACTATTATTGTGACACATAGGGCAGGGAGGGAGGGAGGGAGAGAGAGAGAGAC--------AGAGAACATAATGCATTTTCATCAATATCTCTGAGACCC-TCAAACATGCAAAGGCAGAGATAAGAAACTCTTAGTCTCTCAGTCGGTAACTTATTGATTGCACACAATGTTCATTAATGAGCCAACTGTGAGACGGCTAGGACCAAAAAGTTTCTATCCCCAAATGTGCTGACA-TGTTTAAAATGGAATGCTTGTCTGCAAGAACACCTGTG-TGTGAAACTGGGGATAAAACTTTTTGGAA--CCTTTGACTTATTTCT---TGGGCTCACCGTCATCTATTATTCACATTGATAATTAG chr4 - 94230402 18949727 18949726 18950120 75280283 75280282 75280676 394 ACTTTGGGCACAGTAAGACTATTTACAGCATCAAGAATATTC----------CAATTGCTGTGATACACAAGCTAA------AATGAACCAAAAAGAGAGATGCTGTTTTAAGGAAAACAGGATGCAGTTTCATCAATATTTCTGAGAGCAGTGAAACATGCAAAGCTGCGGATAAGAAACTCTTAGCTTCCCAGTTGGCAATTTATTGATTATATGAGCTGTTCACTAATGAGCTAACTAGAAGCC-----AAAGTAAAAAACTTGCAGAACCAAATATGCTGACACTGTTTAACAATGAGCATGTTTGCACAGAAACACCTGAACTTTGCTGGTGGAGGGAAAATGGCTTTGCCTTCTCTTGATTTATTTTTTTCTTAGCCCATTGTAATATATTATTTAGCTCTATAACAAG .:.......x:..x....x.-.x:...x::x...::x.x...----------.x...::.....:...:.:.x:.:------.:x..:xx.:.:.......x:.--------:..:....x:.....x............:.......x.x-.x............x::x:................::..:....:..:..:.........::.::x:x......:........:....:x:..x.-----::.x:.....::..x:.xxx......:........-.......x.xx..::::x.x.x::..::........x:-.x..xx:x...:.:x....:xx:..x.xx--.::....:......:.---.x:..:..::..x..x.......:.xx.:x....:x.. 20M1I21M10D24M6D22M8I39M1I95M5D35M1I38M1I29M2I16M3I38M 250/377 66.3% 394/94230402 0.0% 38/377 10.1% 8388727 NA +12927 chr4 + 190214555 27352257 27352256 27352767 511 ATCCCTTCAAATGTCTCATTTGCTTGCTTTGTTCGAAACAA----CCAATGATGGATGGCTAATTGCCTCATAGGAAGTCCCTTCAATTTGTCAATTTGCTAAAAATTAGGTAAATAAATGAATCATCCATATTTTATCCCCCTATCTTATAAAAATTCATTCTAATCTTTGGCATTTTCACTTTCTCCATGATTAATTCTACCATTCAAAGAAAACAAACAAATGAGAAACCCTTTAAAATTAGTGAAATAATTGTGCTGCTCATGCTACTCTGTGAAAAAGGCTGTTGATAAAAAAAACTA---TGACCTGATCTCAAACATTAAATGGTTTAGAAGTGAGACCTTCATAATCTGATTGAAGGGATCACATTGAGAATTGTTTTTATCTTAGCTTATATGCTTTCCGATGTGTCCTATCTCCCCAGCACAGAGCTTTACTCTTGGAGAATATTAAGCATGGATTTCTACTTAATTAGTTAATACTATGGATAGCTGCAATTTTATATTTTCAACTT chr4 - 94230402 18964216 18964215 18964706 75265697 75265696 75266187 491 ATTATTTAAGAAGTTTTATTCCTTCTGTTTGGAAGAAATAAGAAATCAGTCATAGCTGG-TAACAGTTTTACATGGTGTCTTGCCAGTTTGCCATTTTGTTTAATTTTTT-------------TTTTCCCTAGTCTCATCATTTATTTAATATGA-TCCATTCTAAACTCTG-CACTTGAGTTTCCTGCATGattaatttaataatattaaaaatGTGATGAAACGCAGACTTCAT--AAATTTGAGGGATAATTATGTTTCTTATGTTAGTCAGTGAAACAAA----TGATGAATAAAACCACAGTGGCCTGATCAAAACCATTAAATAATTTAAAA-TGAGTCCTTCAGAATCAGGGTGGAAGAATTATATTGAAAATAATTGTTATCTTGATTTATAAGCTTTCTGATGTGTCCTATCTCT----TGCGGGGCTTTTCTCTTGTAGAATGTTGAATACATATTTGTAGTTAATTTGCTGATACTATGTATATGGGTTATTACTTTTTCCCAACTT ..:x:..x.:.x..:.:...:x:.:xx....xxx....:..----:..:.x..:.x...-...:x.::.:.:.x.:x...::x:..:....:..x....:.x..xx..xx-------------.:x...x..x.:.xx:.x::...:.x...x:.-.:........x..:..-..:..xx::..:..x...........:x.:x..x:x..:..x:::.xx...:.x::.x::.x.--.....x.x.::......:..:.x..:...:..x..x......x.::----....:..x.....:.---..:.......xx..x........::....:..-....x......x....x.:x..:.:.:..:.:.....:...x:..x.......:::.....x......:...............:----::.:.:.....x......x.....:..:.::.::x....x..x......x.:.:........x...xxx.:x...x:x.x..::...... 41M4I14M1D50M13D32M1D16M1D63M2D46M4D15M3I32M1D85M4D90M 318/484 65.7% 491/94230402 0.0% 34/484 7.0% 8388041 NA +10884 chr4 + 190214555 27357257 27357256 27357631 375 TTTTGTCTCTCAAGGTTATGTTTGTGAGATATTAGGCTACAAAGCATGGGCACGAGGTCACGCATTTTACTC-ATTTAGGCGTTCCTCAGGT---GCAGTACCATGTGTGACCTTGCTCAGCTATCCAAACGAAAATGAAAGAT----TACCCAAAATCAGATTTGTATAAGAA---ATTACTTTGCGAGTCATAGCTGATTTCTCAGTGTTTGTT-TTTCTCTTTCAGCTGAACCATTTCTTTCTCTTGGTCTGAAATCCCCTAGATGGCACTAGAGAATACTATATTTAAGTGGTTTATATAATACCCTTCAGTAAATGAGGGCAAGTAATTTTTATTTTTCTGCAAATAAACATTAATAAGAAGTTGAACAGGATGAAATGCAA chr4 - 94230402 18971917 18971916 18972298 75258105 75258104 75258486 382 ttctttttttCTAGATTGCTTTTGTGAATTATTGAGCTATAAAGCAGAAGTATAGCATAATACATCTTCTCCTATTTATGGATTCTACAGATAATGATGTTATATGTGTAACCTTGTTCAAATATGCTTATTGTAACACAAAATGCAATCCCAAATAGTAGATGCACATAAGAACAGATAGGACTGGCAGTCCTAGCTGATTTCTTGGTGTTCATTCTTTCTTTATCAGATGAGTACTTTATTCCA---GATTTTAAATCCCCTAGATGGCACTACAGAATACAGTATTTAAATGTTTTATGCAATGCTGTTGAACAGACGATGTTAAATAATTTTTGTCCT--GAAAAATAAACATTAACGAGTTATTTAATAAAATGAAATAGAA ..:.x.:.:..x..:..::x.......:x....::....:......x::.:.:::x:.x.::...:..x::.-.....x.x:...:x...:.---.xx..xx:......:......:...:x...x.xx.:x:x..::x..:..----.x..x..x.x:....x:::.......---..x:xx:..xx....x............::.....::..-.....:.x....x...::xx...x..:.x---.:.:.x....................x.......x:.......:..x.....::...:.:x..x.::.:.:..x.x:..:........:.::.--x:x.............::..xx:..x..:.::.......:x.. 72M1I19M3I49M4I26M3I39M1I29M3D93M2D43M 244/370 65.9% 382/94230402 0.0% 17/370 4.6% 8385340 NA +27058 chr4 + 190214555 27360222 27360221 27360778 557 GTTGATCTTGCTCCAGAGTGTTTTCTTCCACAGTTGGCTGTTCCGTGTCTGCATAGATCTGCAGTAAATACTGTACTGCACTGCTGAAAAGGGAGGAAAAACATTACCATCTGCATCTACAGCTTGCAAATTACAGCTTGCAATCACCTGCTATTAAATAAAGACACTTTAACAATATTTTGGGTTTTAAATTAGTAATTTACATCACAAGACTCTGAAAATACTAGTC-TTTTAATACTGCAATTTTCTTTCTTTTTAACCAGGCACCAACATGTATTGAATTTTTTA-------AAAGAAGCTATACAAAGTAATGTTTATTTAAACAATAGCCACCAATGGTATGAAACACACAGATGGAAATCC-GTAGTTCTTTTCTCACTGGGAAGCATCACTGGGCGACCTCGATGAGG-----------CTGCAACTCTCTAATTTACATCATGGGGCAATCTAGGCATTGACCTTTTTTAAAAAAAATAAAATAACTGCTTGGCCACACCAGGCTATGTGACATCTAAGAAAGTGGTCTCAGGCCAGGAATCAGAGGCAAAGTCTTT-GTTTGAAGGAG chr4 - 94230402 18972707 18972706 18973266 75257137 75257136 75257696 560 GTTTGTATTACCCCTGAGCATCT-ATTTTGCAGTTGATATGTCATTGTCTGCAGATCACTGCAGTAAATACTGTACTGTACTGCTGAAAAGAGAG-AAAAACATTGCCATCTGCAACTACAGCTTGCAAATTACAGCTTGCAATCGTCTGCTATTAAATAAAGACACTTAAACAATATTTTGGGTTTTAAATTAGCAATTTACATCACAAGATGCTGAAAATACTAGTCTTTTTAATACCACAATTTTCTTTCCTTTTTGCCAGGCATCAACatatattgaataaaataaataaataaaaaaGCAGTCCAAACCAATGTTTACTTAAACAATAGCCACTGACAGCAAGAGACACGCAGATGGAAATCCAATAGTTTCTATCTCAGTAGGAGGTATTGTTTGAGGACCTTGATGGGGATGTGATTGGACTGCAGCACTCTAATTTACGTCATGGAG-AATCTATCATGATGCCTTTTTT---------------ACTGCACTGTTGTGCCAAACTAGGTCTCCTATGAGAAACTGGTCTCAAGCAGGGAACAGGAAGGAAAGCCTTTAATGTGAAAGAG ...x:.x..:.:..x...::.:.-x..:::......::xxx..xx........x.xxx....................:............:...-.........:.........x.............................::......................x.........................:................:x...............-.........::............:....x:.......:......:........xxxx..-------...:....x:.x....x:........:...............::.::.:.x..:....:.............-:.....::.x.....x.:...:.:..:::.x.:x.....:....:..-----------.....:.x...........:......:.-......xxxxxxx:........---------------.....x:x.:::::...::...x..xx.x.x.:.....x........:..x:....:x:..:.x....:....-:.x....:... 23M1D71M1D133M1I59M7I72M1I47M11I28M1D22M15D73M1I11M 422/539 78.3% 560/94230402 0.0% 39/539 7.2% 8387515 NA +8846 chr4 + 190214555 27361768 27361767 27362117 350 GTGATTTACTTGGAAAAGCAGCCCATTGAATGGTTCTTAGACTTTTCCAGTCCTATAAGGCTTATGGTCACCTTTAATACCATTTATCACCCTATCTTATTATCTCTGCTAAGGTCTAATGTTAGTTCCTCTG-TTAAGGATTAAATTGGTTTCAATCTAATCTTCTAAATAGAATTTAGGTGATTTGG-----GGCCCAGCTCAACTATTTCT--TG---------------GTCAGAGGGCTTTGTTCAGTTTCTTTTATTAGGTGCTATTCATAGTACCATTTGCTGAT-AGAATCAGGGGATAATGGATAGATTTTTATTTCATGTTGATTACATACACGTTCTTTTTAAAGGCTTTTAAAAACTAAATG chr4 - 94230402 18975027 18975026 18975388 75255015 75255014 75255376 362 GTGATTTACTAGCAAAAAGTGTTAAAGCAATTGCTAACTTACTTTTTTAGACTCATTAGTCATGT------CCTTGATATAATTTATCACTCTATCTTATTATTTCTCTTAAGGTCTGATGCCAGACATTCTATTTAAGTATCAGATTGGTTT-AATTTAATCTTGTGATTCATGTTCAGATAGTTTTTTAACCTGACTAACTCAACTGATTTTGCTGCTTCAGAAATGGCATGCCAGAGAACGCTGTTCTTGGCCTTCTATTAGATGCTATTTATAGTTCCTTTTTGTGGTAAGAATTTGTAGATAATGAAAAGTTTTCATTTTTATTCTGGTTATGGACACTTCTGTTTCA-----TTTTAAAAGGTGGGTG ..........x.x....:xx.::x.xxx...x.:.xx:xx......::..x.::..x..x.x.:.------.:..:...:x.........:............:...x:........:...::..x:x:...:-.....x..:.:........-...:.......x.:.x.x:x:..:..:.::...xx-----x.x.:.:.......:x..:.--..---------------.:.....::.x:.....xxxx:...:......:.......:.....x..x...xx..:.-.....:x.x:.......:.x..x...:xx...:..x:..:...::x....x.::x...:.-----........:x.:::.. 65M6D62M1I19M1D35M5I20M2I2M15I59M1I60M5D16M 226/338 66.9% 362/94230402 0.0% 36/338 10.7% 8386741 NA +3174 chr4 + 190214555 27365460 27365459 27365510 51 AAAACAAACAAGCAAACAACAACAACAACAACAAAACAAAAAAACCCCACA chr4 - 94230402 79230835 79230834 79230879 14999524 14999523 14999568 45 AAAACAAACAAACAAACAATAACAACAACAAC------AAAAAAACCCACA ...........:.......:............------......x...... 32M6D13M 42/45 93.3% 45/94230402 0.0% 6/45 13.3% -51865375 -42365027 +3170 chr4 + 190214555 27387390 27387389 27387456 67 AGGTGCAAGTTATTCTTGTCCTTTTTTTGCAGACAAGGGAACTGAGGCACAGAGAGATTAAAGTCAA chr4 - 94230402 48024982 48024981 48025048 46205355 46205354 46205421 67 AGCTGGAGGTGTCTGTTGTCCTCCCTTTGCTGATCTGGAAACTGGGGCACAGGGAGGTGAAAGTCAA ..x..x.:..xx:.x.......:::.....x..:xx..:.....:.......:...:.x........ 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -20637592 -73592810 +13204 chr4 + 190214555 27390287 27390286 27390964 678 TGCTAATTTGAAAGACCATTCAAACTTATCTTTCATGGGTATACTGTGATAAAGGCAGGCTCCAAATTGCTTGCTGACCCTTCTAAGC-----AGGTTTACTTCTCCATTGAAATAATCGTCCTCCGTCTAAAACTGTTGCTTAGGCTCCCACTGCGTTACCATTTCACTCCCTTGGAGGAGATAACACAGTAGGTTTAATCATCTGA-AGTCAATTGACTGGAATTATTTCCTCAGTGACAGCTTTGTTGT---CATTTTGTAACACATTCTTAGATGTGGATGAACTTGATAAAATAAACAGGGACATTTTCTCTGTCTAAGCGAGAAAAGAAATTAAGTATTGGAAAATGCAATTTT-----------------------ACTTTTTGTTTAAT-------------GTCAGACCTCTATCCAAGAGCCATCCCATTTGCCAAAGAAGAG---ACCTTTACTGAGATCTTAGCTTAAACTTG--CCTTTATTTAACTTTCTAAACTTGAGGCTCAGTGAGAGACAACTAAGAAAGGATCTGAGCATCATAATTCATTAGG----TAAACTTCATTCACCCCCATGGTGTCCCATAATTATTTCTTAAATTATTTTATTATGCTTATGCAACCTTAACCATGATTTA------------AGATATCTTAACATTTTCATGTTTTGC------TTTATTTTCTGGGTATAAATTATTTAAA----TTGTCATAAACTGGGCTCCTTTGAAGTG chr4 - 94230402 18981040 18981039 18981784 75248619 75248618 75249363 745 TGATAATTTTAGAGGCTGCTTTTACTTTACATTTATCAGTATGTTGTGTTGTTGACAATGTA-AAGCAACTTTAGGAC--TTCTAAACTTTCAAAATCTTCTGCTTCACAAGCAAAACAACCCTCTGGATAAAACCACCATTTAAGCTCCTGTTGTGTAACTATTTTACTCCCTTGGAGAAGATAACATGGTAGGTTGAATTATCTGGTAGAAAATTGTCAAGAATTATGTTCTGAATGACAGCTGCGTTGTTAGCACTTCATGATGGTTTCTGAAAGGCTGATGGACAGTTTAGAGTGAGCAAGAACATTTTC----CCAAAGTAAAAATAAAAATAAAAAAAGTCAAAAACCAATCCCCAAATTATCAGCAGTATGAAGAAACTATTTCTTAATTCCATATTCCTTGAGTTAAATGCTTGTTTTGGAATCATCCTGTTTCCTCAGTAATAGCTAATCATGCTGGAGGAACAAAATTGCTTTTGTCCCTTTACTTAACTTTGTAGAACACATAGGCAATTATGGG-AACTAAGAAAGGTTATACTGGCCATCAGTCATTCTGGTTTTATATTTTATTCA-CCCCATGGTGCCTTGTAATTGTTTCTTAAATGACCTTATTATGTTTGTGCAACATGGAAAATAGCTCACTTCACTTGCTTAAAAATTATCCCAATTCCATGTGTTTCTATTCATTAATTTTATACATGTAGATTGCTTAAATTACTTATTATAAACTGTACTTCTGTGGGGTG ..x......x.:..:.:::.:xx....xx.x..:..x:....::....x.:xx.:..:xx.x-..::x:...xxx...--......:.-----.::.:.x..x..:..:x::x.x..:x::....:.xx......::::::...:.....:::..:..x..:....:............:........::.......x...:.....:-..xx.....x.x:.......x.:..x.:........x:.....---..:..::.:.::xx....x.:.x.:x....:..xxxx..:.:.:.:..:.:........----:.x...::.:..x.:....x..:x.xxxx....xx....:::-----------------------...x...x..x.x.-------------..:.:.:x::.:.::x:..::.....::...x.:x.:x..x..---.:.x.xx:x...:xx:x.:x..:xx:...--......:........x..:.x:xx.x:xx..:.x.x:.:-............x.x.:xxx::...x.x.....xx.----..x.:..:.....-..........:.:::.....:..........x.::........:..:......x.x:.xx..:::.:.------------.:.x..:x.xx..x..:.....x..x.------..x.....x.:x:.:..:...::.....----..:.:........x:..:..x..::... 62M1D15M2D8M5I115M1I43M3I59M4D42M23I14M13I43M3I29M2I39M1D36M4I13M1D68M12I27M6I28M4I28M 422/669 63.1% 745/94230402 0.0% 85/669 12.7% 8409247 NA +3116 chr4 + 190214555 27401316 27401315 27401395 80 ACAGAGTGAGACTCCATCAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAAAGAAAAGAAAACCTTGAAGAGACCTCCAAAA chr4 - 94230402 61014045 61014044 61014122 33216281 33216280 33216358 78 ATAAAGTACAACTT--TCAAAAGAAGAAAACAAAAAATAAAAGGGAAAGAGAAGACAAAATAGGGCAAAGACTTCCAAAA .:.:...:x:...:--......:..:....x....:.x..:.::....:....:.x....:xxx.x.:....:....... 14M2D64M 54/78 69.2% 78/94230402 0.0% 2/78 2.6% -33612729 -60617673 +3118 chr4 + 190214555 27401320 27401319 27401372 53 AGTGAGACTCCATCAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAAAGAAAAGA chr4 - 94230402 21061135 21061134 21061187 73169216 73169215 73169268 53 AGTGACACTACACCAAAAAAAAAAAAAAAAGTATCAGGAAGGAGAAAAAAAGA .....x...x..:.................:x.xx..:...:.:..:...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 6340185 NA +3208 chr4 + 190214555 27402966 27402965 27403026 61 ATATATATACACACATATATATACACACACACATATATATATACACATATATATACACACA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ...:.x..:..:...x..:....:......:...:....:.x...:...:x..::...:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 19806553 NA +3756 chr4 + 190214555 27402970 27402969 27403107 138 ATATACACACATATATATACACACACACATATATATATACACATATATATACACACAATTATATGTGTGTATATA----TATACAATTATATATGTGTATATATACACACACATATA-------TATACATATATACATACCACAATTG chr4 - 94230402 89016082 89016081 89016230 5214173 5214172 5214321 149 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCACTG ..:.:.......x.::..:.........:.x.::::.:......::.x..:..:...xx..x........::.x.----.:::..xx:.::x...:..::x:..:x:.....x.::.-------.:.:.x:....x..:...x.x.:.. 75M4I38M7I25M 85/138 61.6% 149/94230402 0.0% 11/138 8.0% -61613112 -32617290 +3241 chr4 + 190214555 27402976 27402975 27403046 71 ACACATATATATACACACACACATATATATATACACATATATATACACACAATTATATGTGTGTATATATA chr4 - 94230402 52481237 52481236 52481307 41749096 41749095 41749166 71 ACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ...::x.....x:.::...:::..:....:....:..:...:xx.:.:.x.x............x...... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -25078261 -69152141 +3801 chr4 + 190214555 27402995 27402994 27403098 104 CACATATATATATACACATATATATACACACAATTATATGTGTGTATATATATACAATTATATATGTGTATATATACACACACATATATATACATATATACATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..:::....x:...........:.:.x.x:..xxx:..::.::.....x:..:..:.x.....:..x...:.....x.:..:.x:.:.x.x...:.:..::... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% -45718111 -48512291 +3359 chr4 + 190214555 27435556 27435555 27435627 72 GGAGAAGTGAATTCAGCAAGTAGCAATGTTGGTTACATTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTC chr4 - 94230402 72497065 72497064 72497136 21733267 21733266 21733338 72 GGAAAATTGAATGCCCTAAATAGCTTTGCTGGTGAGATTTTTTTCTTTTCTTTTTTGTTTAAATGGAGTTTC ...:..x.....x.xx:..:....xx..:....x.x....:...:....:......x..x.:.:.....:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -45061509 -49168893 +3040 chr4 + 190214555 27440587 27440586 27440640 54 CTATTATCCCCATCTTGTAGGTGAGGAAACTAAAGCACAGAGCAATTAAATAAA chr4 - 94230402 73290471 73290470 73290524 20939879 20939878 20939932 54 CTGTTATCCAGCTTTTATAGATGAGGAAAATAAAGCACTGGGAAATTAAATGAA ..:......xxx.:..:...:........x........x.:.x........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -45849884 -48380518 +3095 chr4 + 190214555 27460881 27460880 27460954 74 GAAACAATGATTACAGTAATCACTGTTATTCGTAAAAAAAAAAAAAAAAAAGAATGAAAAGGAAATAGTCACTA chr4 - 94230402 69000315 69000314 69000388 25230015 25230014 25230088 74 GAAATGACAATTAAAACACTAACTGAGATCCTTAAAAAGAAAAAAAGAAAAGAAAAATAAAGAGAGAACCATTA ....::.::....x.::.x.x....xx..:.x......:.......:.......x:.x..:..:.x.::..:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -41539434 -52690968 +3026 chr4 + 190214555 27466300 27466299 27466357 58 ATAGTTGATTGTATATATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964827 14964826 14964884 79265519 79265518 79265576 58 ATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:x...xx...::.:.::.:...:....:...xx........::............. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 12501473 NA +3513 chr4 + 190214555 27476469 27476468 27476542 74 CTGCAACCTCTGCCTCCCAGGTTTAAGCGATTCTCCTGCCTCAGCCTCTCAGGTAGCTGGGATTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::....:...:.x...x.xx.x........:...:........:.:....x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 9279343 NA +11037 chr4 + 190214555 27480450 27480449 27480764 315 AAATTGTGTGTACAGCTTTATTAATCCTAGTTTTGAGTTGGTCTTTTTTCCTTCCATAGGGTAACCTCAAACCTTGATTAGTTATTTAAAAATCAATATCTTATAAAGAGAAAATTGCTTTTATATTTTACTCTACAGTGTTTTGCTACACATAGCATTATTGGTTTAAACAAAATGTTAACTGTTTAAATCAAAAGCAAACCTTATACATGGCTATGTACGGAAGATTCAGTGGGCATAGGCTACTGTGTGGCGAAGGAAAACACATTACTAAACTAGTTTATCATCTACTGATTCTCCAAAATTCATTTAAAA chr4 - 94230402 19013897 19013896 19014197 75216206 75216205 75216506 301 AAGTTGTATGTATAATTTTATTAATTCTAGTTTTG------TTTTTGTTTTCTACATAGAATAAGAACAAACCTTACTCACTTATTTAAAAATCGATACCATAAAGTGAAAAAATTGCTTTTGTGTCTTACTTTACGGTGTTATGGCTCACACTGTATTATTGCAGTAAATG------CAGATGTTTAAATCAAAAGTGAGCA--GAAGTTGTTTACAGACAGCAAGCTCAGCAAACAAAAGTAGCATTATGGAAAAGAAAAATACATTAATAAAGTACTTTGTCATCTGATCATTCTGTGCAGTTTGTTTGAAA ..:....:....:.::.........:.........------.:...x..:::.x.....::...xxx........:x.:.x.............:...:.x..x.:x..:............:.:.:.....:...:.....x..x:x....:x.:.......xxx....::------:.:x...............::.:.x--:x.xx..x:..::x..:.x.:::....::::..x.:.:x:.xx.:...x:...:....:......x....x..x...:......:x.x.....x::x.:..::...:... 35M6D131M6D25M2D110M 204/301 67.8% 301/94230402 0.0% 14/301 4.7% 8466553 NA +11700 chr4 + 190214555 27480450 27480449 27480764 315 AAATTGTGTGTACAGCTTTATTAATCCTAGTTTTGAGTTGGTCTTTTTTCCTTCCATAGGGTAACCTCAAACCTTGATTAGTTATTTAAAAATCAATATCTTATAAAGAGAAAATTGCTTTTATATTTTACTCTACAGTGTTTTGCTACACATAGCATTATTGGTTTAAAC---AAAATGTTA--ACTGTTTAAATCAAAAGCAAACCTTATACATGGCTATGTACGGAAGATTCAGTGGGCATAGGCTACTGTGTGGCGAAGGAAAACACATTACTAAACTAGTTTATCATCTACTGATTCTCCAAAATTCATTTAAAA chr4 - 94230402 19012286 19012285 19012597 75217806 75217805 75218117 312 AAGTTGTATGTATAATTTTATTAATTCTAGTTTTG------TTTTTGTTTTCTACATGGAGTAAGAACAAACCTTACTCACTTATTTAAAAATCGATACCATAAAGTGAAAAAATTGCTTTTGTGTCTTACTTTACGGTGTTATGGCTCACACTGTATTATTGCAGTAAATGCAGAAATGTTAGCACTGTTTAAATCAAAAGTGAGCA--GAAGTTGTTTACAGACAGCAAGCTCAGCAAACAAAAGTAGCATTATGGAAAAGAAAAATACATTAATAAAGTACTTTGTCATCTGATCATTCTATGCAGTTTGTTTGAAA ..:....:....:.::.........:.........------.:...x..:::.x...:.:....xxx........:x.:.x.............:...:.x..x.:x..:............:.:.:.....:...:.....x..x:x....:x.:.......xxx....:---:........--.................::.:.x--:x.xx..x:..::x..:.x.:::....::::..x.:.:x:.xx.:...x:...:....:......x....x..x...:......:x.x.....x::x.:..::...:... 35M6D130M3I9M2I23M2D110M 213/307 69.4% 312/94230402 0.0% 13/307 4.2% 8468164 NA +3829 chr4 + 190214555 27481790 27481789 27481872 83 CTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTATCTGGGATTACAGGCATGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.:.........:.x...x..x.x........::......x....:.:....--.:........:::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 9284664 NA +3395 chr4 + 190214555 27484734 27484733 27484797 64 AAACAAACAAAATAAAACAAAAAAAACCACTATATATATATACACACACACACACACACATAAA chr4 - 94230402 60979342 60979341 60979404 33250999 33250998 33251061 63 AAAAAAATAATA-AAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAA ...x...:..x.-........x....x.x.........:.:.:.:.:.............x... 12M1D51M 51/63 81.0% 63/94230402 0.0% 1/63 1.6% -33494608 -60735794 +3006 chr4 + 190214555 27484743 27484742 27484817 75 AAATAAAACAAAAAAAACCACTATATATATATACACACACACACACACACATAAATATATATATGTGTGTGTGTA chr4 - 94230402 39238335 39238334 39238409 54991994 54991993 54992068 75 AAATATAACAAATATCAAAACTTGGTATGTATACGTACACACACACACACATAAAAATCAATTAATATATAGGTA .....x......x.xx.xx...xx:...:.....::...................x..xx..xx:.:.:.:x... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -11753592 -82476810 +3088 chr4 + 190214555 27484767 27484766 27484831 65 ATATATATACACACACACACACACACATAAATATATATATGTGTGTGTGTATATATATACACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:...::.........:.....:.x.:....x..x..x::x.......:.xx:.:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -39420080 -54810322 +3181 chr4 + 190214555 27515706 27515705 27515772 67 GTGATTATCTGTCAAATGAACAATATGAAAAATGTAAGAAGAATTATTACTATATATTTTTTTTACT chr4 - 94230402 20148714 20148713 20148780 74081623 74081622 74081689 67 GTAATTACCTTTCTGATGAACAACATGAAAACTTTAAGGAAAATAAGTATTAAAAATGTCTTTTATT ..:....:..x..x:........:.......x.x....:.:...x.x..:..x.x..x.:.....:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 7366992 NA +3199 chr4 + 190214555 27532200 27532199 27532260 61 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGGGTAGT chr4 - 94230402 44177688 44177687 44177748 50052655 50052654 50052715 61 TCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGAT ....x..:...............:....:.:.x.....x:x.::..:..:...:..:.::. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -16645488 -77584914 +8767 chr4 + 190214555 27533066 27533065 27533397 332 TCTGCCATCAAGTCAGGAAGTTGCCTTCAAT-----GCCAATGGTCGTATTTCATCTTGTTGCTTCCCC--------ACAGTAAATTCCAATCCTTCTTTTGCTTGGCTGTGACCACCTGTTCTCTCACACCTGTTTCAATTTACAAACCATACTCTGGAGTCACAGCTGAGAACCACTGTAGACATGATGGGACTGCTCATAAATATTTCATAAATTCAAAGTTTCCTGTAGTTAAAAAGAATTTGAAGGCATTGATTTTGCTGAAAGCCTCACAGAGACTGGTATGCATTCTT--TATCATCATCATTATTTGGGCAAAGAAAGATGAAGTTTACTTCCTTATAA chr4 - 94230402 19051418 19051417 19051743 75178660 75178659 75178985 326 TCCGTCATTATGTCCACAAATTTCCTTAGAAAGTAAGTAAGCTGTTGAATCTTTCCTTATTTTTTCCCCCTCCTCTTATGGTGAATTCCAGCTATGTTTTTGAATGGCTGCAACCACCTTTTCTCCCATGTCTGTTTCAGTTTATAAACCATATGTTGCAGTCACA---------CACTATAGACATTATGTGCTTTCTTGTAAATATTCTGTAGACTTCCTAATCTCTTCACTTCAAAATAATTTGAAAGCATTGA-TTTACTGAAA-----------ATTTGAATGCTCTCATAATATTATATCTGCTCCTTAGGCATAGAGTTATAAAGATTGCTGAATCATAA ..:.:...:.x...x:x..:..x....x:.x-----.:x.::x..:.x..:.:x:...:..x:......--------.::..:.......:::x.x:.....xx......::.......x.....:..:::........:....:........:x:..x.......---------....:.......x...x.x:.x..::........:::..:.:.:xxx:x.::..x:.x..x....x........:.......-...:......-----------.:.x.x....x:..x.--...:..xx::::.x:..:....x...:xx..:...x..:..xxx.:.... 31M5I33M8I89M9D82M1D10M11D16M2I50M 206/311 66.2% 326/94230402 0.0% 36/311 11.6% 8481648 NA +8839 chr4 + 190214555 27533066 27533065 27533397 332 TCTGCCATCAAGTCAGGAAGTTGCCTTCAATGCCAA-----TGGTCGTATTTCATCTTGTTGCTTCCCC---------ACAGTAAATTCCAATCCTTCTTTTGCTTGGCTGTGACCACCTGTTCTCTCACACCTGTTTCAATTTACAAACCATACTCTGGAGTCACAGCTGAGAACCACTGTAGACATGATGGGACTGCTCATAAATATTTCATAAATTCAAAGTTTCCTGTAGTTAAAAAGAATTTGAAGGCATTGATTTTGCTGAAAGCCTCACAGAGACTGGTATGCATTCTT--TATCATCATCATTATTTGGGCAAAGAAAGATGAAGTTTACTTCCTTATAA chr4 - 94230402 19049480 19049479 19049806 75180597 75180596 75180923 327 TCTGTCATTATGTCCACAAATTTCCTTAGAAGGTAAGTAAGCTGTTGAATCTTTCCTTATTTTTTTCCCCCTCCTCTTATGGTGAATTCCAGCTATGTTTTTGAATGGCTGCAACCACCTTTTCTCCCATGTCTGTTTCAGTTTATAAACCATATGTTGCAGTCACA---------CACTATAGACATTATGTGCTTTCTTGTAAATATTCTGTAGACTTCCTAATCTCTTCACTTCAAAATAATTTGAAAGCATTGA-TTTACTGAAA-----------ATTTGAATGCTCTCATAATATTATATCTGCTCCTTAGGCATAGAGTTATAAAGATTGCTGAATCATAA ....:...:.x...x:x..:..x....x:.x.x:..-----:x..:.x..:.:x:...:..x:..:...---------.::..:.......:::x.x:.....xx......::.......x.....:..:::........:....:........:x:..x.......---------....:.......x...x.x:.x..::........:::..:.:.:xxx:x.::..x:.x..x....x........:.......-...:......-----------.:.x.x....x:..x.--...:..xx::::.x:..:....x...:xx..:...x..:..xxx.:.... 36M5I28M9I89M9D82M1D10M11D16M2I50M 207/311 66.6% 327/94230402 0.0% 37/311 11.9% 8483586 NA +4465 chr4 + 190214555 27554913 27554912 27555160 248 TTTGATATTTTGTCAAGTTTGCTTTC------TATCTTCTTAAATTTTTGTTATTTATTGATTTGGAAGTTTTGCATTCTATTTCTTTTCTCT-----CTTTCCCTTCCTTCCCTCTCTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCTTTCTTTCT-----TTCCTTCCTTCCT--TCCTTCCTTCCTTTCTCTTTT-----TCTTCTTTCTTC chr4 - 94230402 13896791 13896790 13897065 80333338 80333337 80333612 275 TTTGATATACTGCCTTTTCTGTTTTCACAGGATACCTTTTTA---CTTTGTTTTTTGTCCACT--GTCACTGTGATGCCCATTACTTTTTCATGTCCACCGTCCATTTCTTTCATATCTTTATCCTCTACTTTGGTACATTCTTCCTTTTTCTTTATTTCCTTGTTGCTGTGCTTTATGCTTCTGCTTTTGTGACCTTCAACAGAGAACTTTCTTTCTAGCTTGGAGTTACTTACATCTTTGTCACCTCTGCATTTCTCTTTTACTGATCCTCTTTCTCC ........x:..:.xxx.:..:....------..:...:...---:......x...:.:x.:.--.xx::.x..xxx:.:...x.....::x.-----.:x...x..:...:.x.x.....x.:.::.x....xx.x.x.....:..........x....:..x..x..x.x:..:x.x...::x:.:..x:xx:...:---------..........xx..-----..x...x.x..:.--..x:::..x.x..........-----..:.......:. 26M6I10M3D18M2D28M5I101M9I14M5I13M2I21M5I12M 161/243 66.3% 275/94230402 0.0% 37/243 15.2% 13658122 NA +3899 chr4 + 190214555 27554971 27554970 27555168 198 GGAAGTTTTGCATTCTATTTCTTTTCTCTCTTTCCCTTCCTTCCCTCTCTTTCTTCCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTT--TCTCTTTTTCTTCTTTCTTCTTTCTCTT chr4 - 94230402 45185572 45185571 45185751 49044652 49044651 49044831 180 GGGATTTATGCTTATTGCTCATTTTCCCTCTT------CCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTT---------CTTTCTTT---AACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTT--GTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..:.x..x...x.x:.::.:x.....:.....------...xx:...xx...::.x....x..::...:........x....::x:.......---------........---xx:.::.::......:x...xx.x::.:..x:.x...--x..:...:xx..x:..:.--......x.....:.:....:xx...:.. 32M6D55M9D8M3D37M2D18M2I28M 117/178 65.7% 180/94230402 0.0% 22/178 12.4% -17630601 -76599801 +3010 chr4 + 190214555 27555036 27555035 27555100 65 TTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ....x..:.......:.....:...:.....::::.:.::....:....x.xx..:::.:x.... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -37660630 -56569772 +15249 chr4 + 190214555 27612186 27612185 27612661 476 TTTAGAAATTTGGCACCTCTTTGCTCTTATTCTGTAATGTAGGATATTT---TTGCTCCATAAATCTAATTCCTAACACAATCTGCAAGATGAGCAGTTTACTGATTTCAAGGGAGGCTTCTGGCAACTCCTTGTT-AACTTAAAACATGACCATTCACTTGGATATTTTCAAACACATTTTCTTTCTTT--------GCTATGGAGATTCTAACTGCCAACATTTTATCAACATGTTTTCAATGGGAAATTTATTTCACACTTTC------------TCATAAAACCTCAATAGACCACACTTCTCAAATTTGATAGGTCAGAATGTGCTGCCTGTGTACTGCTATGATAAGGGGAAAA-----TCCCAAAATGCCGGCTTGGACTTTTCCATTCTGGTGCACTGAAGACAGCATTTTTCTCTGTTATCATGTATTAAGTATTATATATCAAACCATAGAATAAAGTTTTGCAAGGGAATATTAACGTCAATTAGGAATCATCA chr4 - 94230402 19098643 19098642 19099141 75131262 75131261 75131760 499 TTTGGAAATATGCTATCTGTTTATACTTCTTATGCACTGCAGGGTATTTATTTGGCTTGAGGAATACACCTCCAAATACAATTTGCAAGATATGCAGTTTCCTCATCACAGGGGAAGCTTCAGGCAACTACTTGTTTAATTTCAAATGTGAACATTAGATTGGGTATTTTAAAAGTAATTTTTTGTCCATCGCGTGCCACTAC-----TTCTACCTGCTAACATTTTATCAACATGTATTCAATAGGAAATTCATTTCATACTTTTTGCTGGAGTTTATTCTAACAGCTGAATAGCATGAACATCTTCAACATGATAGGTCAGAAGGTGCCA-CTGTGTAGAGCTGTGATAAGGGAAAAAAACGCTCCAAGAAAGTAAGTTTTTACTTGTTTCTTCTGGTATGTAAAAGCCAGTATTTTTTCCTATCAGAGTTTCCCAAGTGTTGTAATAGGAAATGTAATGTTTAGCTTTATAAGGATCTTCTTATTCCAGTCAGAGATTAGCA ...:.....x..x:.:..x...::x...x..x..:.x..:...:.....---.x...:x.x:...x:.x:...x..:.....:........:x.......x..x..:x..:....:.....x.......x......-..:..x...::...x....x:x....:......x...xxx.....:.x..:x.--------:...:-----.....x....:..................x......:.......:......:.....:------------.:x...x.x..x.....xx::x..x...:x..:x.............x....::-.......xx...:.........:....-----...x.:..x.:x:.:..xx....x.::x.......::::x:...x...:......::..:.:.xx:.x.x::....:..:..xxxx:..x::..:x:.xx..:...::....:xx.x:.x.:x:..:.:..::..:.x.. 49M3I84M1I53M8I5M5D58M12I54M1D27M5I140M 320/470 68.1% 499/94230402 0.0% 35/470 7.4% 8513543 NA +14607 chr4 + 190214555 27631569 27631568 27632014 446 CTAAAGTGTCAGTTTGGCATCTGGATTCTGT-AGGCATAATTGGATTTATTCTATGCAACTAGAATTGGGATTTTTTTTTTT-------------------TTTTTTTTTTTTTTTTTTTTTGCTGCTGAAGCACTATGTTGCAGTTTTTGCTGGGAAATGAGTGTTAAGCATTTTGTTTGGTACTCGGAAAATCTGCCTTGACAGTCCTTCATAATAGAACCAATTATCAGGTATGCTATTACATATAGACTTCCGGACCCCAATTTAAATAGAAGGTAGTGATCATTTCTTTTGTAAAATAGTCTCCATAACACTTAAAATCAACCATATGTGAAGACCTACATGCTTATCAAGGTGACAACATGGGACTGAGAATACTTGTTACCTAAATAAATACTTC-TGAGGCTGTGATGATTCAATTGCCAACTAAAGAGAATGACAGGTATTAACATCCTCTTCCAAAG chr4 - 94230402 19103280 19103279 19103698 75126705 75126704 75127123 419 CCAAATTCCAGGTTTGGCATCTGCATTATGTGAAGTATAATTACATTTACTGTAAGTAATTAGA--TTAAATTTGTGCTGCTGGAGCAGGAAAGCATGGAGttttatttattttttttttttCCTTGTGAG----------------------------TTAGCGTTAAGCAGTCTGTTTTGTGCTTGGAAAATTTACCATGACAGTGCTTCATAATAGAACCAATTATCAGGAATGCTGTTACACATAGCCTTCCAGACCCCAATTTAAACAGAACCAGGTGACAATTCCTTGTGTGTAACAGTTTCTCT--------AAATCAGCTATATGTGAAGACCTACATTCTTATTGAGAATAAAACAAGAAAC-ATGAACTTCTGT----TAAATAAATATGTCTTGAATTTGTTCTGATTAACTTTCAAATTACAGGGA-----GAATATTGACAGCAACTTCCAAAG .:...x.x:x:............x...x...-.:.:......:x.....:.x..x.:..:....--.x::....x.x:.x:.-------------------....x...x............x..xx...:----------------------------.x..:........x.:.....x..:..:.......:.:..x.......x.........................x.....:.....:....x.....:..............:....xxx:....:x...:...x...:x..:...:..:x.--------......:.:..................x.....::..:xx.x....x.::..-:x...:x::...----..........:x..-...:x:...xx.....x.x..x.x..:..x..:..-----:::....:...x.xx......... 31M1I32M2D16M19I30M28D152M8D52M1D12M4D14M1I35M5D24M 297/398 74.6% 419/94230402 0.0% 69/398 17.3% 8528289 NA +14178 chr4 + 190214555 27631580 27631579 27632014 435 GTTTGGCATCTGGATTCTGT-AGGCATAATTGGATTTATTCTATGCAACTAGAATTGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGCTGAAGCA-------------------CTATGTTGCAGTTTTTGCTGGGAAATGAGTGTTAAGCATTTTGTTTGGTACTCGGAAAATCTGCCTTGACAGTCCTTCATAATAGAACCAATTATCAGGTATGCTATTACATATAGACTTCCGGACCCCAATTTAAATAGAAGGTAGTGATCATTTCTTTTGTAAAATAGTCTCCATAACACTTAAAATCAACCATATGTGAAGACCTACATGCTTATCAAGGTGACAACATGGGACTGAGAATACTTGTTACCTAAATAAATACTTC-TGAGGCTGTGATGATTCAATTGCCAACTAAAGAGAATGACAGGTATTAACATCCTCTTCCAAAG chr4 - 94230402 19105237 19105236 19105644 75124759 75124758 75125166 408 GTTTGGCATCTGCATTATGTGAAGTATAATTACATTTACTGTAAGTAATTAGA-----------------------------TTAAATTTGTGCTGCTGGAGCAGGAAAGCATGGaattttatttat-ttattttttttCCTTGTGAGTTAGCGTTAAGCAGTCTGTTTTGTGCTTGGAAAATTTACCATGACAATGCTTCATAATAGAACCAATTATCAGGAATGCTGTTACACATAGCCTTCCAGACCCCAATTTAAACAGAACCAGGTGACATTTCCTTGTGTGTAACAGTTTCTCT--------AAATCAGCTATATGTGAAGACCTACATTCTTATTGAGAATAAAACAAGAAAC-ATGAACTTCTGT----TAAATAAATATGTCTTGAATTTGTTCTGATTAACTTTCAAATTACAGGGA-----GAATATTGACAGCAACTTCCAAAG ............x...x...-.:.:......:x.....:.x..x.:..:....-----------------------------..xxx...x........:....-------------------:...-..::xx.....x..x.x:.:.x..:........x.:.....x..:..:.......:.:..x.....:.x.........................x.....:.....:....x.....:..............:....xxx:....:xx..:...x...:x..:...:..:x.--------......:.:..................x.....::..:xx.x....x.::..-:x...:x::...----..........:x..-...:x:...xx.....x.x..x.x..:..x..:..-----:::....:...x.xx......... 20M1I32M29D22M19I4M1D172M8D52M1D12M4D14M1I35M5D24M 289/387 74.7% 408/94230402 0.0% 69/387 17.8% 8526343 NA +9561 chr4 + 190214555 27644645 27644644 27645026 382 TACTTACTCTGCCTGGTAAAAAACAATAAACCCCAGAATTTGCCATTATTTTTGAAGAGGACAATAATACAAATGCTT--GCATTTGAGCTGGCATCGTTTCTGCCTCTGATAAATTCCAAAGGCCCCTGGTTATTAGACCC-TTAGAACTTCCCAGGATCCCATTTTCTAGGCCAAATTGCAAAGAAAACTCATAGAAATGGAAAATCATAAAAGAAATCACACTGTGCTGCCAATGTTCAATGGGAAAGAGTTGCTTGGCCAGCAGTCCAAAAACAGGAATGAGCA-TTTTACAATATTGTATGTGTGCTGTTCCCATCAATTTATATTGAGGACAACTGGAGGAAAAAGAAAAAATAAAATAAAACAGCAACTACAGCAGAGA chr4 - 94230402 19110428 19110427 19110779 75119624 75119623 75119975 352 TAGTTTTTCTGCCTACACAACAAAACTAAATCCTGTAGCTGACGGGGTGTTATGCTGAGGAGACCATGACAACTTCTTTTGTATTTACACCAGAA---------CCTTTGATCAAATCAAAACACCCAGAGTTATTAGACATGTTTGAGCAACACCACATTGCATTTTCTAGGCAACTTTCCTTCAAAAACTCGTAAAAATAGAAATTCATAAGAGAAAGAACATTACACTAGTGATGCTGAATGGGAAAGAAACGCTTGGCCAGCAGTCCAAACACTGGAATGTGTATTTTTACAATATCTGATATGAAA----CTCATCAATTTACCTTGAGTGTGGTTGG---------------------AAAACTGCAACTGCAGCAAAGA ..x..x:.......:xxx..x..x.x....:..::x.::.x:.x:xxxx..x..xx.....x.x:.xx....x.x...--.:....:x:.::.x.---------...:....x..x..x...x:...xx:..........x:-..x..:.xx.x.x:x..:x............x.xx..x.xxx:.......:..:....:....x......:.....xx...:.:::..:x::...:.x...........:x:...................x..x......x.:.-...........:xx..:..x:x----.:..........:x.....x:::::...---------------------.....x......:.....:... 78M2I15M9D38M1I145M1I22M4D28M21D22M 235/348 67.5% 352/94230402 0.0% 38/348 10.9% 8534217 NA +3106 chr4 + 190214555 27660654 27660653 27660714 61 CTAAAATTCTCTGTGCCTCAGTTCCCCATTTGTAAAATGAATATAATAATGGTACCTTCCT chr4 - 94230402 15751743 15751742 15751803 78478600 78478599 78478660 61 CTTAATTCCTCTGTTCCTGAGTTCTCCATCTGTAAAATGGAAATAGTAATATTGCTCTACT ..x..x.:......x...x.....:....:.........:.x...:....:x.:.::.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 11908911 NA +8123 chr4 + 190214555 27682203 27682202 27682463 261 TGTATGAATAGAATGACTT-----TGACCTATAAAATAAAAGATTTTGTTAAAGCTACTAGACTCTC--TTTCCTCTGTTTCAGTGAAAAGGATCAGATGAGCAGCCTCCTTTTGTCTAGGAGAAAAGAAGAAAA---------AGTGAAAATTGCACTGTGATCTGTGGAATGGAAGTTTGATGGGAAAGTACAAGAGAGTTTAAAAGCAAGAAGGAAAAGTGAATTTATGAAACAGCTGGGAATGGTAGCAAAGAGAGTGAAGGGTTAAGTGGAA chr4 - 94230402 19123505 19123504 19123776 75106627 75106626 75106898 272 TGTGTGGAAAGGATAACTTATCATTGGAGTATAGGA--AAAAGTTTTGTTATAGTCATTAAAGTTCCATCTTCTCTTACTGCATTGAAAAGAATCAAAAACACAACCTCCTTTCGTCTAGGAGAAAAAAAAAAAAGAAAAAAAGACCAAAAACCATGCTTGGATCTATGGAATAGAGAGTTGATGGACAGGTAAAAGAGGAGTTGGAAGCTAAAAGAAAA---GAATATATTAAGTACCGAGAGACTGCAGGGGAGAGTGTGAAGGACATACTGAAA ...:..:.x..:..:....-----..:xx....::.--...::........x..::.:..:.x.::.--:...:::.::.x..x.......:....:.x:x:..:........:.............:..:....---------.x::....:::::..xx.....:......:..::x.......:x.:...x.....::x..::....x.:...:...---....x...x..::.x.x:.::.:x.:..x::....x.......::xx.x..:.. 19M5I12M2D29M2I66M9I76M3D54M 169/256 66.0% 272/94230402 0.0% 21/256 8.2% 8558698 NA +3088 chr4 + 190214555 27684043 27684042 27684116 74 AAAAACAAAACCAAAAGAAAACAAGCAAAACAAAACAAAACAAAAAAACAGGAAATCCTTCCTCATGATCCCTA chr4 - 94230402 68402328 68402327 68402401 25828002 25828001 25828075 74 AAAAACAAAACAAAAAGACAACAAACAAAACCAATAAAACGTAACAAGCACAAATGCCTTTGTCATTATCATTA ...........x......x.....:......x..xx...xxx..x..:..x:..xx....:x....x...x:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% -40718285 -53512117 +3052 chr4 + 190214555 27704457 27704456 27704508 52 CCACCTTCTGCCTGCTTTTTCTTTTTTTTTCTTTTCTTTTTTTTTTTTTTGA chr4 - 94230402 50228267 50228266 50228318 44002085 44002084 44002136 52 CTACCTTCTGCCTGCCATTTCTTTTTCTTTTCCTTTTTTTTTTCACTTCTAA .:.............:x.........:...:::..:.......:x:..:.:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -22523810 -71706592 +21637 chr4 + 190214555 27724846 27724845 27725335 490 TTAATCAGTATGGCTGACATGACACAAACATCATTTAATGAGTGATTTTGAAATGGTGAAATATAAAGTTCTGGAGCTTCCGAGCTTGTCTAAATTTTTAAAATCTCTGATTTGAACAAATTGTCATTTGTATCTTCCAAAAAACACGTTACCTCTGCCGCGGTGAAAAATCCATATGATCTGCACTGTCAGATTTTATTATTATTGTGACAGATACTTTAGCATATAAATCTTAAACTAATG-AAAAAATGTCATCTTCTTTTTGGAGCTAAGTGTTCAAAGTGCGTCAATTATTCGATTTGATAGACGTTTCTTCAGAAGGCTTTGGAGGAATCACATATTAAAAATACTTTGTATATGAAACTCTTCTCACTTATATCCACCTCCACAGTGTATAAACTAATTGTAAACCACT--TTGGAGAACTAGATTTCCAAAAAAAATTTTACCTGTA--------GGAACAAAACTCTAAAAAATGCCAAACAATATTTCTTT chr4 - 94230402 19134786 19134785 19135267 75095136 75095135 75095617 482 TTGATCTGGATG-CTATCATAACAT---CGTTAGCAAAGAAATGATACTGAAAGAATGAGATATATGGAGTGAGAGCTACCTTGTTTGTCTAAAACTTAAAAATCTATGATTTGAACAAATTGTCATTT-TATCTTCTAAAGAACACATTACCTCTGCTGTG-TGAAATACCCATATGATCTGCACTGTCAGATTTTATTATTATTGTGACAGATACTGCAGCATATAAATTTTAAACTAATGAAAAAAATGTCATCTATCTTTTGGAGCTAACTGTTCAAAGTGCATCAGCTATTCAATTTGATAGATCATTCTTCAGAGAGTTAGAGAAGAATTGCATATTAAAAATACAGTGAAGGAAAA-----CCTCACTTTTATCGAGCTCCACATTTTATAAACTAATTCTGGAGAACTCATGAGAGAGATCTACTTCTAAAAATGTTTCTTTATGGAAAGTATCTGGAAAAAAAAGGTAAATAA--------AATATTTCTCT ..:...x.x...-..:x...:...:---.:.:.x:x..x:.:....x:.....x::...:.....x:.xx:x:.....x..xx.:.........x:..x.......x......................-.......:...:.....:..........:.:.-.....x.:...............................................x:...........:...........-..............x::............x............:...::.....:..........:xx.........::.:.xx:..:....::..............xx..x.x:x:..-----:.......x....x.x.......x.x............x.::.xx...--.x:....:x.xx.:...:.....x:x..:.x:x..x.--------....x....xxx....x..--------.........:. 12M1D12M3D101M1D32M1D80M1I119M5D48M2I37M8I19M8D11M 365/471 77.5% 482/94230402 0.0% 30/471 6.4% 8590060 NA +3041 chr4 + 190214555 27726307 27726306 27726358 52 CAAAAAAAAAAAAAAAAAAACATATTAGGTTTTCTTAGTTCTGAATCATTTT chr4 - 94230402 50466193 50466192 50466244 43764159 43764158 43764210 52 CAAAAAAAAAAAAAAAAAAACATTTTGTTTTTCCTCAGCTCTTTTTCATTTT .......................x..:xx...:..:..:...xxx....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -22739886 -71490516 +3357 chr4 + 190214555 27731285 27731284 27731346 62 TGTATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x.:..:...x..:....:...::x..:..xx...:...............x..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 19335484 NA +3658 chr4 + 190214555 27731285 27731284 27731361 77 TGTATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATACATGCATAA chr4 - 94230402 8395799 8395798 8395875 85834528 85834527 85834604 77 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ...::...x.:..:...x..:....:...::x..:..xx...................x.....x..:x..:x.x.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 19335486 NA +3049 chr4 + 190214555 27731287 27731286 27731352 66 TATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATA chr4 - 94230402 8395805 8395804 8395870 85834533 85834532 85834598 66 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.::x... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 19335482 NA +17008 chr4 + 190214555 27757325 27757324 27757795 471 TTTTAAAATAGGAAGCTTTTGTTGACTTGAATAATAATCACAAGACAGTGAAAAC---AGAAGCTCTTCTTAAACTTATTTATAGATAAATGAGTAGTTCTTTACTGTCAGCTCGTCATTTGCATGTATTATCTTTTTACATTTAAATGTA-----------TTAAAAGAAGAAAAAAATGATTGTTAAGTCTACATATATTTTGCAAGGTCTTTCTCTTTCTAT------------TGTTCGAAAAATACCTCACCTGGTATTGGGGTTTAAAAAAATGGCAATATGTATTAATCCACAAA-GAACTTATATAGCTTTGTGATTATGAATAGAGAAAAATATGAGAAAAGGCAAAGTTAGCAAAAAAAAA---------------------TCTTTAAAAGTAAGCAAAAATTTCATGTCAGTCAAATACATTAAAGCTAGATGCTTTGAAACTCTACTTGCTAAGCCTTGGGCATAAAACAAGAAAGCTATGAGCTTGGCTGAATAAAACACACACA chr4 - 94230402 19140425 19140424 19140918 75089485 75089484 75089978 494 TTTCAAATTCAGAGGCTTTTGTTGATTTGTGTCATAACCATAATGTTATTTAAATCCAAGAAGGT-----TATACTTAATTATAGATATGGCAGTA-TTTTTGACAGTTTG---GCCTTTTTAATGGATTATCTTTTCTCATTTAAGTATAAACAGTAGGAATAACAAGAACAAAAA---------TGAATCTGCAAAT--TTAACAAG---CTTCCTTTTATATGTTTAATAACTATCTTTGAAGAAGAATACACACCGTGCTGAG-CTTAAAAAATTGACAATATTTATTAAGCCACAAAAGAGCTTATGTAGCTTTGTGATTATGGACAGAAAAGTATATTAAAAAAGGCAAAGTTAGCaaaaaaaaaaaaaaagaaaaagaaaaaaaaGCTTTAAA-GTAAGCAGAAATTACATGTCAGTCATAGACATTAAAGCTGGCTGTTTTTAAACTCCAACTGCTAAGCCCTGGGCATGAAACAAGAAAATGATGAGGTAGGCTGAAAGAAATGCACACA ...:...x.x:..:...........:...x:.x....:..:..x::x:.xx...:---.....x.-----..x.....x.........x:xx....-..:..x..x..:x.---.:.x...xx...x..........:x.......:.:..-----------.x.x.....x.....---------.:.:...:..x..--..x:....---:...::...x...------------.x..:...:..x.x:x...x:x..::..:.-:........x..:......x......x.......-..:.....:................:.:...:..:x....x.:.........................---------------------x.......-.......:.....x...........x.x...........:.x..:...x......:.x:.........:.......:..........::x.....x.x.......x:...::...... 55M3I7M5D26M1D14M3D37M11I15M9D13M2D8M3D13M12I30M1D34M1I68M21I8M1D118M 343/446 76.9% 494/94230402 0.0% 73/446 16.4% 8616900 NA +3400 chr4 + 190214555 27767603 27767602 27767676 74 CTGCAACCTCCGCCTCCCGGATTCAAGTGATTCCCATGCCTCAGCTTCCCAAGTCGCTAGGACTACAGGTGTGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:..:........x...x..x.x......:.::.....x...:.:......x...::. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 9570477 NA +3217 chr4 + 190214555 27783832 27783831 27783987 156 TTTTCTTAAGACTGGAAG-----TAATAACATGTATATTGTTTTT----ATTGTTTTTAGAAGATCTTGTAGGGAGACAGAATGATGAAAATG---TAGATGTAATTGCAGATTTTGGATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGACGGAGTCTCACT chr4 - 94230402 57402606 57402605 57402770 36827633 36827632 36827797 165 TTTTCTTTAAACTAAAAAATGCATAATTATATG-GTACTGCCTTTCAACATTTTTATTTCAAA--CTTTAATCAAAAAAGCTTTATAGAAGTGATTTAGAAAGAATTACATTGTTTGGGTTGTTTGTTTTTTTTTTTTTTTTTAACATCCTCAGAACGAAGTCTCACT .......x.:...::..:-----....x.:...-:..:..::...----...x..x..xx..:--...xx.xx:.:.x..xx.x..::..:..---....x:x....:..xxx.....:.xx..:x.................xx:x.::.::.:...:......... 18M5I10M1D11M4I14M2D28M3I72M 102/153 66.7% 165/94230402 0.0% 15/153 9.8% -29618774 -64611628 +3257 chr4 + 190214555 27785344 27785343 27785396 53 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGTAAACAAAATAACAGCATAAC chr4 - 94230402 48089516 48089515 48089568 46140835 46140834 46140887 53 GTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAAC ........:....x.x........:.:...:x..x.........:..::.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -20304172 -73926230 +3124 chr4 + 190214555 27786271 27786270 27786309 39 ACAATGTTGTTCTCTCTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 47552689 47552688 47552727 46677676 46677675 46677714 39 ACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT ...:.....:.........:.:................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -19766418 -74463984 +3039 chr4 + 190214555 27792953 27792952 27793050 98 TGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAATATATATATATAT------ATATATATATATATACATATCATTGCATGTGTAT chr4 - 94230402 48089497 48089496 48089600 46140803 46140802 46140906 104 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATAT ....x..x...:.:.::::........:....x.x......:........x..:.:.x.xxx..------.:..x...xxxx......x.x.x....::::... 64M6I34M 66/98 67.3% 104/94230402 0.0% 6/98 6.1% -20296544 -73933858 +9292 chr4 + 190214555 27802110 27802109 27802508 399 TTTTAAAAGTTTACTAGTTGTACTTATTGATTATATTCTGTACTAATAT--AGAGCAAGTTAGAAGCCTCTTCCTTT--------TAAAAAAAATT-----AGAGCATATTCAAAATAAG-----CTCTTGAAGAACAA---CACTAAAAGGCAAAATTAGGTATAAAT-CAAGCATATTT-AAATAAT--TTATCATGCTTTTTTT--GCTTGAAAGTACACCGTGTGTATACATATATGTATGTTTTTAATATAATAATATTTAAAACATGCAATCTTACAAATTTGAAAGCCACCAA---AATTGACTATACAAG---TACATCTTCATAAAGAATACTAGTATCCAAAATACTCAAATACAAAAT---CTCTAATTTACTCACCTCCAAATTATTCTCCAAAGAGATTTAAAAATAACACTAAAAATGCTAAC chr4 - 94230402 27775823 27775822 27776241 66454162 66454161 66454580 419 tttaaaacatttaataGT-GCACTTATTGGATATATTCTGTACAGACATCTATAGCAAGTTAAA--CATTTTCCTTTCTCTCACTTAGATCATAGTCGTGTAAAGCACATTTACAATAGAAAACATACTTGAGGTACAAAAACCCAAAAAGAATATCTGAGGTATAAATACAGGTATATTTTAAATAATCTTTACCATGCTTTATCTATGTTTGACAGTACACTGTGGG----CAAGTATACATGTTTACAATAGAATGGTATGTACAACATACAATTTTACAAATTCAAAAGTGTTTGATGTAGAAGAATATACAAGGTTTTCCTACTCATGAGGAACACTATTACTGGAAGTAC-----TACATTATTTGCCATAATTAATTAA----AAAAATCTTCATCAGAAAGCTT--AAAATAATACTGACAATGGTAAC ...x...x:....x....-.:........:x............x:.:..--.x.........:.--.x.:.......--------..:.xx.x.x.-----.:....:...:.x....::-----:x.....:.x....---.x.x.....:xx.xx.x..........-..:.:......-.......--...:........x.:.--.:....x.......:...x.----..x:...::......x:....x...::...x..x.....:....:.........::....:xx:::.---.:xx..x........---.x.x.x:....:.:...:....x..::x:..:...-----....xx..---.:x.....x.:.x.----x...x.x...x:..:.:..x..--.......:...:.x....x.... 18M1D30M2I13M2D11M8I11M5I19M5I14M3I27M1I11M1I7M2I16M2I20M4D67M3I15M3I35M5D8M3I14M4D22M2D23M 278/381 73.0% 419/94230402 0.0% 56/381 14.7% 26287 NA +16634 chr4 + 190214555 27810467 27810466 27810912 446 TAGATGGACTGTTTGAATGGTAGAATGTGACTGCCAACAAAGGAAGTATACAAATAAACAAATATGTTCTTGCAAAAAACAAAAAGTCCAGAGAATCGAATGATCAGTGCCTCAGTCGTTACTTCCTTTTCACTTATCATTTCAAGCTGCGTTATTTTGATGGCTTTTCAGCTGTGAGACTACTTGGTACTGATGCAGAAATAATGAAATACTGAAAACCCCAAACAACAGAAACGTCTATAACTGGTAATGGGCATCCTCCTTCAGTTTATTAACTCCAGCTGTGCTGTTTGACTGTTTTTTGTGAAGAGGTGC-----CATATGAGTTGAATATCGAATGGAAGATAGAGGATCTAATGTCACAAG--CAACTGGATCACCCAAACTCTGTATTACAAGACAGGCAGTTTGAGGAAATTGCCCTACTTTGAAACAC---AGTTCCATGCTCATC chr4 - 94230402 19169504 19169503 19169939 75060464 75060463 75060899 436 TAGATAAACCTTTCGTGTGCTCATATACGAATGCCAC---AGCACAGATACAAATC------TCTGTTCACCTAGAAAA------GCCCACAGAATTGAATGCTCTGTGCTGTGGTTGTTCTGTTACTTTCATTTATCATTTCAAGCTGTGTTATTTTGATGGCTTTTCAGTTGCAGGACTACC-AGTGCTGATGCAGAGATAATGAAATACTGAAAGCATCAAACAACCGGGATGTCTGTAACTGGTAATGGGCATCCTTCCTCAGTTTATTAACTCCAGCTGTGCAGTTTGACAG-TTTTTGTGAAGAGGTGCAGCAAAATGTGA---GAATGCTGAACAGAGAACGAAGAAGCTAGTGTCAAGAAGTAAACTGCATCACGTGCAATCTTTGCATGTAGACTTGCAGAAAATGAAAATCATCATCTTTTCAAACCTTCAATCTCCATCTTCATC .....::..:x..:.x:..x.x:x..::..x.....x---..x.x:x........x------.x.....x:x:.:....------.:...x.....:.....x..x....:x::..:...x:x.:x:.....:................:.....................:..:::......:-:..:..........:.................:.x:........x.::.:....:....................:.:........................x.......x.-.................-----x..:...---....:::...::..::.:::..:.x...:.....x:.:--x.....x.....x::x.x...x.::xxxx....xx....xxx:x.:....:::.x.x:...x....x:---.x:.....x:..... 37M3D16M6D17M6D99M1D112M1D17M5I7M3D38M2I68M3I15M 309/426 72.5% 436/94230402 0.0% 30/426 7.0% 8640963 NA +3162 chr4 + 190214555 27815164 27815163 27815239 76 TGTCTCAAGCAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAACCAGAAGGAAGCAAGAAAGGAAAC chr4 - 94230402 12335838 12335837 12335916 81894487 81894486 81894565 79 TGTCTGAAACAGCTCAAAAACAAAAGAAAAAAGAAAAAAAAAACCACAAAATACAGTAGTGGGAAGCATGAATGGAAAC .....x..:..:---.....x....:......:..........xx.x...:xxx.x:..x:.......x...x...... 12M3I64M 57/76 75.0% 79/94230402 0.0% 3/76 3.9% 15479326 NA +3491 chr4 + 190214555 27826734 27826733 27826806 73 CTGCAACCTCCACCTCCTGGGTTACGGAGATTCTCATGCCTCAGCTTTCCAAGTAGCTGGGATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..:.......xx:.x.x...x..x.x......:..:...........:.:....x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 9629608 NA +3277 chr4 + 190214555 27832763 27832762 27832884 122 GACAACAAGAGTGAAACTCCAT------CTCAAAATTAAA-----ATATATACATGTATA----------------TATATATATATATATATATATATATATATATATATATATACACATACATATATATACATACACACATATATAC chr4 - 94230402 8395711 8395710 8395859 85834544 85834543 85834692 149 GGCACTGAGAGTTAAAGTTCATACAACCTTTAGAATTCAAGTGGAATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGAC .:..x::.....x...x.:...------:.:.:....x..-----..x.:.....::.x.----------------:..:.:.:...:.:.::...x.:..:...x..:....:..::.x.....xx...:...:.......:.:.x.. 22M6I12M5I15M16I73M 82/122 67.2% 149/94230402 0.0% 27/122 22.1% 19437052 NA +3119 chr4 + 190214555 27832786 27832785 27832933 148 TCAAAATTAAA-ATATATACATGTATATATATATATATATATATATATATATATATATATATATATACACATACATATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATATATATATATACCTTGTAAATATAA chr4 - 94230402 40224597 40224596 40224724 54005679 54005678 54005806 128 TCAGAATTAAACACACAAACTAGCACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCA-------------------ACA-GGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAA ...:.......-.:.:.x..xx.:.:..:....x.xx..-...:x....:....:..xx.x.x.:.:..-------------------...-:x.:.x.:x.x...............:........x...:...:x.xx.x....... 11M1I27M1D29M19D3M1D57M 90/127 70.9% 128/94230402 0.0% 22/127 17.3% -12391811 -81838591 +3192 chr4 + 190214555 27832792 27832791 27832868 77 TTAAAATATATACA-----TGTATATATATATATATATATATATATATATATATATATATATATACACATACATATATATAC chr4 - 94230402 17520731 17520730 17520812 76709591 76709590 76709672 82 TTAAAATGCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......::..x..-----::x.......x.:.:.x...:.:...:..:.:x..::x.:....x......:........... 14M5I63M 55/77 71.4% 82/94230402 0.0% 5/77 6.5% 10312061 NA +3100 chr4 + 190214555 27832826 27832825 27832891 66 TATATATATATATATATATATATATACACATACAT--ATATATACATACACACATATATACGTGTGTG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xxx:......:......x........--.:..:.:.x:.:......:..:..:...:.. 35M2I31M 49/66 74.2% 68/94230402 0.0% 2/66 3.0% -20334212 -73896190 +3000 chr4 + 190214555 27832837 27832836 27832877 41 ATATATATATATATACACATACATATATATACATACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x........:.......:....:......x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -17438851 -76791551 +3553 chr4 + 190214555 27832859 27832858 27832948 90 ATATATATACATACACACATATATACGTGTGTGTGTGTGTGTATATATATATATATATATACCTTGTAAATATAAGAACAGAAAAATTTA chr4 - 94230402 61485373 61485372 61485450 32744953 32744952 32745030 78 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT------------TCTGTAGATGTATAGATAGATAGGTGTA .....:..............::.:..x.......:...:.....x.....------------::....:..:..x::.:...x.::.x.. 50M12D28M 58/78 74.4% 78/94230402 0.0% 12/78 15.4% -33652514 -60577888 +3075 chr4 + 190214555 27864761 27864760 27864831 71 ATGTGTATATATATACACACACACACACATATACATATACACATATAT--ATATATACACACACACACAATCA chr4 - 94230402 8395788 8395787 8395860 85834543 85834542 85834615 73 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ......:...:.:.:..:.x...:::.:x..:.:..:..::.x..:..--...:.:.............:x.. 48M2I23M 49/71 69.0% 73/94230402 0.0% 2/71 2.8% 19468973 NA +6396 chr4 + 190214555 27868710 27868709 27869076 367 CAATCATATATAATGCTTAATCTAGCTTCTTTACATTTTATAATTTTGGAGAGCTTAGCTGCTTGTATTTTAGCAGATATTAGAACTTTTTTCTTAATTTCTATATATGTTAT---AAAACGTTAACCTGTTTAATCTTAAT-ATACTGGTTTATAACAGCTTTTAGGCAGAATTGAATTACCTATAATATTTCAACTTCCTTTTCTCT-TCTGTTTAAGGACAGTGGTAATTCAAGGAAGGTAGTTTTGTTGTA-AAATATAACTGTCAGTGTTTGTCATTAGCACCTATTTGTAAACTGAGTACTGAGCACTTAAAGATACTTTTATGAAGTATCCTTGTAAATTCTTTACAAATAGTCAAGTTATAAGTA chr4 - 94230402 19190600 19190599 19190952 75039451 75039450 75039803 353 CAATAATATTTAA-GCCCAATGTCACTTCT--ACATTTTACATATTAGTGGAAAATGGTTCATTGTCT--------AAATTC-AGTTTTGCTTTTGACATTTAACTATGTAGTGCAAATATGTGGATCAAT---ATCCTAATTCTAACAATTTAGGAAAGCTTTTGGAAGTAACTGAAGTGCCTGTGTCCTTTCCATGTGCATTTTTCAATATG---AAGGATTGCAATATGGCAAAGGAAAT-GCTTTGTTATACAAAGCAAATTTTAAGTGCTGTTAATTAACATTCATTTTCAGGTTGAGT-TTGAGTGCATAAAAACACTTTTCTTAAGTATTCTTGAAGATACTTCACTAACAGTCAAGTGACAAGTA ....x....x...-..::...x.x:.....--........:.xx..x.x:..:xx.:.:.xx....x.--------.x...x-.::...x:.:..:.:x.:..xx.....x:.---..x.:..x:.:.x:.---...:....-x..x:::....x:.x.......:.:x:x..:....x.:...:.:x:x....x.:x.x.x...:..x-.x..---.....:x.:::..xxx...:.:.::.-.:......:..-...xxx..:.x.x....:.xx.x....:..:::....x:.:::.....-:....::.x....:.:......x.x......:....x.:..x...:..x..:........x.:..... 13M1D16M2D36M8D6M1D30M3I15M3D8M1I66M1I4M3D26M1D11M1I48M1D68M 224/347 64.6% 353/94230402 0.0% 26/347 7.5% 8678110 NA +3008 chr4 + 190214555 27880844 27880843 27880887 44 TTCTGAGCCCTCCACATTCTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 15658578 15658577 15658621 78571782 78571781 78571825 44 TTCAGAATCCCCCACATCCTTTTCTTTTTTCTTTTTTTTTTTAA ...x..::..:......:.....:......:...........:. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 12222266 NA +3339 chr4 + 190214555 27889317 27889316 27889419 103 TTTCTTCCTTTCTTTCTTTGTCTTTCTTTCTTTTCTT--TCTTCTTTCTTTTTCTTTCTTTTCTTTC-TTTTTCA--TTCTTTCTTTCTTT---TCCTTCCTTCCTTCCTT chr4 - 94230402 45185576 45185575 45185686 49044717 49044716 49044827 111 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTT ...x.x.:.x.:x:..x..x..::....:..xx...:--.:....x::.:x................-.......--..::..........---..:.:....:..:x... 37M2I28M1I7M2I14M3I17M 75/103 72.8% 111/94230402 0.0% 8/103 7.8% -17296259 -76934143 +3114 chr4 + 190214555 27889339 27889338 27889448 110 TTTCTTTCTTTTCTTTCTTCTTTCTTTTTCTTTCTTTTCTTTCTTTTTCATTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTTC--ACTTCAAGAAAGATAATTCATTGAAAT chr4 - 94230402 41570553 41570552 41570664 52659739 52659738 52659850 112 TTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTTGGTATGAAATCTTTCACTTAGAT ...x...x..x..:....x....:.....::..::.......xx...x..:xx:.:x.:..:...:.:.xxx.:...:.....--....x:x:x:.:..xx....:.x.:.. 83M2I27M 70/110 63.6% 112/94230402 0.0% 2/110 1.8% -13681214 -80549188 +16072 chr4 + 190214555 27902185 27902184 27902940 756 TCTCATGATTACCAAACACCCTACTTAGATA-----TGCCTTATTAGTTTCTCTTTTGGATATCTTTATTCTTAGAAAACCATACTGCA-------GTGTGCTAGAATGTGATGATGTTAGCACTTTAAAATA-TGAGCAGCTGCTTCAGCCGAACTAGTCGCTCACA-AAAATTAATCTGCCCTTTA-CATTAATCTGTGGACCAATCAAAATGTTTTCTTAATCCTAGGAGTTTAATAATGTAGTCTAAATCAGTCTGGTCCAGGTGCCTTGCGCTGCCTAAAGGAAAAGTAACAAGAAAATTTAATCTGAAGATTATTAAGTATTTTTGGTTGGTACTGGCTGGTATCACCTAGCAACTATAGAACATACTGAATAAATCTAACAAATAGCAACTCTTCCTTCCTGTTACCTCAGATAAAATATTTAGGAGAAAGTAAGTATGCATACTAATGGCA-GTAAAGAA---GATGATAAGACACTAGA--ATTTTAGGA---AGACAAAACCTTTGCAATAACAACTTGTGGCCACTCCTATTACTAGGATGA---------------------TAGTTGGCTGAATAACGTTTATAAAAGCAGAAGTTCAAAAGATGGCTTGGAGGTTATAGTCTATGATACAGATGCACAGTTTTGAAAACTGAAGAAACACAG-TCTAGGCCAGAAGTAAATGAACTCGGTTAAGTAATCTACTGTCCAGGCATTGTAATTGGTCAGGTTTGCAGAGAAGGACAAAGCAAACAGCTTAAAATTTTATCACGTAATTGGGTAGGTTATGG chr4 - 94230402 19204308 19204307 19205071 75025332 75025331 75026095 764 TCTAATGAATATTAAACAACAGGGTGACATAAGGAGTACCTTATT------CCCCCTTAACAGTTCTACTCTGAAAAAAACACACCAAATATGTTGATCTGTTGAAGTTGGTTGAGGTTAGCAGTTTGAAATGCTGAACAGCAG-TGCA--CAAATTTGT-ACTTACATAAAATTAATCCACCCTTCAACATTATTCTAGCAGCCAATCAGAACTCTCCCTTAATCCAAATAGTTTTATAATGCACTTTAAATCATCAAAGTCCAGGTGCCTTACACTACTTAAATGAACAGTAACAAGGAAATTTAATCTCAAG---ATTAAGTATTTATAGCAGTGGCTAGGGGGTATCACCTAGCAACAACATGGCCCACAGAGTAAATCTAATAAACTGCAGCTCATCCTTCCTGTCATCAATAATCAAATAATCAAGACAGGAAAAGCACAAGTAGTGATGACACAGAGAGAATCTAATGATGAAGTACAGGGACATTTTAGGAGACAAAGAAAATGTTTA-GATAACAGAATATAGTCTGCACAATAATTAGGATAAGGCAAAGCTGGACTTCAACCCCAGTTAGTTGAATG--------GAGAGAAGAGGTTGAAGTGAGGGGAGGGAAG-AAAACTGGAGGAAGAAGAT--AAGAGATTAAACATGGCAGAGATAGGGATTCAGG--AAAAGTAAGCAAAC---------TAAGATGCTGTCAAGGCATATTTCCTGGGCAGACTTCTGAAAAAGAAGGGCACAGATA--TTAAAATTTTATCAGATAGCTTAAGAGATTATGG ...x....x..::.....x.xx:x.x.x...-----.:.......------:.:::.x:.:.x:.:..:...x.:....x..:..::x.-------:.x..:.::.:.xx.x...x.......x...:....:-...:....x.-.x..--.:..:.x..-:..:...-..........::.....:.-.....x...:xx::.......:..:x:.::........x.:x.....x......:.x.:.......x:xx:.............:.:..:.:....x...x.........:...........x...---...........x.:.:x.xx:..:.xx................x.:.x::.x:..x..:.........:...:x...:...x..........:.:.xxx:..x.....x.:.:..x.:::x...:.::x:..x.:...:..-:x.:....---:.....:.:::..x:.:--.........---.:.x....:x...:-:......:xx.:.:.:.xx:x.x..x.:......:.---------------------:....:.:.....:--------:.:..x...:...x..:x..x..xxx...:.-x.x.x.xx.x..x:x....--.x::xx..:..x.:x.x...:.:.x:.-.::...--.:......:::...---------...xx.:.....x......xx.xx:...x...::..x:::.:...:.x::x:..:.:.--..............x:..::.x::x..:...... 31M5I9M6D38M7I37M1I10M1D4M2D9M1D7M1I19M1I126M3D141M1I8M3I17M2I9M3I14M1D36M21I14M8D31M1D19M2D27M1I6M2D14M9D58M2D34M 475/718 66.2% 764/94230402 0.0% 84/718 11.7% 8697877 NA +3119 chr4 + 190214555 27907622 27907621 27907676 55 AACATGCATACACACATACATGCATGCACACATACACACACACGCACACACACAC chr4 - 94230402 8395807 8395806 8395861 85834542 85834541 85834596 55 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ......:..x:...:..::....x.:..:xx............:......x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 19511815 NA +3060 chr4 + 190214555 27907626 27907625 27907683 58 TGCATACACACATACATGCATGCACACATACACACACACGCACACACACACGCACACA chr4 - 94230402 90815415 90815414 90815472 3414931 3414930 3414988 58 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA ..:..::.....::..xx::............x.....:.......:.x:.:...x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -62907789 -31322613 +3225 chr4 + 190214555 27922359 27922358 27922472 114 TCTCTTCCTATCCCCATCTCTGTCTCTCTCTCTTCATATATACAGATGGGTGTCAGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982283 18982282 18982356 75248047 75248046 75248120 74 tttctttttttttctctctctctctctctctct----------------------------------------GTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA .:....::.x.::.:x.....x...........----------------------------------------.................x.x...............::..:. 33M40D41M 60/74 81.1% 74/94230402 0.0% 40/74 54.1% 8940076 NA +3761 chr4 + 190214555 27922359 27922358 27922477 119 TCTCTTCCTATCCCCATCTCTGTCTCTCTCTCTTCATATATACAGATGGGTGTCAGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAGAGAT chr4 - 94230402 18982279 18982278 18982357 75248046 75248045 75248124 79 tttctttctttttttttctctctctctctctctc----------------------------------------tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT .:....:..x.::::x.....x...........:----------------------------------------.x....................................:.::... 34M40D45M 65/79 82.3% 79/94230402 0.0% 40/79 50.6% 8940080 NA +3102 chr4 + 190214555 27922433 27922432 27922468 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -53706631 -40523771 +3413 chr4 + 190214555 27922433 27922432 27922474 42 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAGA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..................x.................::.:.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 8940118 NA +3316 chr4 + 190214555 27922435 27922434 27922470 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -53706629 -40523773 +3002 chr4 + 190214555 27922437 27922436 27922471 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -53706627 -40523775 +3385 chr4 + 190214555 27922437 27922436 27922487 51 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAGAGATAATATTTTTG chr4 - 94230402 18982315 18982314 18982365 75248038 75248037 75248088 51 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTG ................x..................:..::x.x.xx..... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 8940122 NA +7488 chr4 + 190214555 27930743 27930742 27930955 213 TACTTTTCAAAAAGTTTTAACTACTTTCCCAGTTGACTTAAAATGAAGAGAAAATAGCTTTTATTGTGACAAAATCTAATAAGAAGTCAGTTATATTTCAGTTTATTGAGAAAATTAAACATATAGGCAACTTGAAATTACAAGCTTATAACCATACTGAAACTAATTATCAATCAATATTTCATAACAGCCCTTCAAATTAAGCAA--TGTTAA chr4 - 94230402 19223459 19223458 19223666 75006737 75006736 75006944 208 TAATTTTCAAGGACTTTTAACTGCAGTCCCAGATGA---GAATTTAA---AAAACAGCTGCTATTGTGGAACAGTCTGGAAAGAGATGAGACATATTTCAGTTTATCAGGAAAGCAATACAAGAGGGGTATTTAAATGTACAGCCTTATAGCCCTACTGGAACTAATTGGCAAT-AATGTTTCTTAGCTGTATTTGAAATTAAACAAATTGTTAA ..x.......::.x........:.xx......x...---:..x.x..---....:....x:.......:x.x.:...::x....::.x..x:..............:::....::x.x...x:x:..xx.:..:..xx....:x......:..x.....:........:x....-...:....x..:.x.:x:..x.......:...--...... 36M3D8M3D124M1D32M2I6M 147/206 71.4% 208/94230402 0.0% 9/206 4.4% 8707284 NA +3081 chr4 + 190214555 27956565 27956564 27956620 56 TCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAATTGACAGGACCC chr4 - 94230402 40483188 40483187 40483243 53747160 53747159 53747215 56 TTTCTTTGAAAGAATGGGAAAAAAAAAAAAAAAAAAGAGAGAAATAGATTGGGTCC .:.....:...:..x:::..................:...x....x..:x..::.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -12526623 -81703779 +3266 chr4 + 190214555 27964420 27964419 27964492 73 CCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT chr4 - 94230402 22629302 22629301 22629374 71601029 71601028 71601101 73 CCTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTT ...................:x.x...x.x.::x....:..:.x...x...x..:.:.x:.:::...:.:.... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 5335118 NA +3140 chr4 + 190214555 27971276 27971275 27971331 56 TACACATATGTACACATAAATCTTTATATATGTACATACATACATATACATATATA chr4 - 94230402 43735065 43735064 43735120 50495283 50495282 50495338 56 TACATATTTGAAAGCATAAACTTTTCCCTACGTATATACATACACATACATATATA ....:..x..x.x:......::...x:x..:...:.........:........... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -15763789 -78466613 +13467 chr4 + 190214555 27983586 27983585 27983816 231 TTATGAAACCTAAACACTTCCATTAGATAAAAGACCTAAAATGATTATGAAAAATGTTCTTTTTCTTCCAAATTGCTCTAAATCAAACACTCAGTAGTATAATATGTTTTAGGTTAATTAGTTTAATCCAGTTTTAATTAAACTGATGTTTCCATGCCAACAAATGGTTTTTAAATTGTTGAAATCTTGATGTTTTGGAATATGACT--AAAATTAATTACCTAAGAGCATTT chr4 - 94230402 19233836 19233835 19234060 74996343 74996342 74996567 225 TCATGTAAGCAAAATATTTCCAATATGTAAGAGACACAAAATGATACTGAAAAATGTTCTGTTTCTTCTGATGTATTCTAAATCAAACACT-------GTAGTGTGCTTTAGGTTAATTAGTTTAATCCATTTTTAATTAAGCTGATGTTTCCATGCCAACAAATGGTTTTTAAATTGTGGAAATCTTGGTGATTTAGAGTGTGAGTAAAAAATTAATTGCCTAA-AGTATTT .:...x..x.x...:.:.....x..x:...:....x:........xx.............x.......::.xx.::...............-------:..:.:..:.......................x..........:.....................................x.........:..x...:..:.:...x.--..........:.....-..:.... 91M7D109M2I16M1D7M 187/223 83.9% 225/94230402 0.0% 10/223 4.5% 8749750 NA +3041 chr4 + 190214555 28041777 28041776 28041853 77 TATATATATATATATATATATGTATATACACACATTTTCTTTATTTATCCATTCATGGACACAGATTGTTTTCATAT chr4 - 94230402 61428356 61428355 61428431 32801972 32801971 32802047 76 TGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTATCAATGGATAGAAAAAGATT-TCTCCACAT .:...:.:.:::......:..:....:.....:.x...:..x..x....x..xx..:..x.x.....-.:.:..:.. 67M1D9M 53/76 69.7% 76/94230402 0.0% 1/76 1.3% -33386579 -60843823 +3310 chr4 + 190214555 28050079 28050078 28050132 54 CATTCCTTTTTATTCTCTCTCTCTCTCTCTCTCGCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339957 49339956 49340010 44890393 44890392 44890446 54 CATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ....:......:x.x.x.:....::........x................::.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -21289878 -72940524 +3047 chr4 + 190214555 28055895 28055894 28055959 65 AAAAAAAAAAAAATATATATATACACACACACACACACACACACACACACACACACACGCACACA chr4 - 94230402 87372728 87372727 87372792 6857611 6857610 6857675 65 AAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ..:.:.......x...x.x:.x...........x.........:x:.:..::.:::...:.:.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -59316833 -34913569 +3052 chr4 + 190214555 28055900 28055899 28055934 35 AAAAAAAATATATATATACACACACACACACACAC chr4 - 94230402 24373165 24373164 24373199 69857204 69857203 69857238 35 AAAAAAAATATATATATACACACACTCACACACAC .........................x......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 3682735 NA +3017 chr4 + 190214555 28056888 28056887 28056926 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -41380851 -52849551 +7939 chr4 + 190214555 28058449 28058448 28058717 269 ATAGCTTGTATATTAATTTAAATTTTTCCTCTTTTAATAAAAAGAAAA---AGATTATTCATGAGTGGAATAACCAGGAGACAAATAACAAATTAGA---------ATGTTTTAAAGTTGG--TTAAATCTAGTTCTAGAGGCACAAGCTTATATTGATGCACAACATAAATGAATTACTCTCAGGCCCTGGCAATTGAGTATGCAATAATTATAGCATAATGAGATAATGAAGAGACTCTGTCAGGTTT-------TTTTTAAGCAGAGAGGCTTGAGGATACAAATAT chr4 - 94230402 19243869 19243868 19244150 74986253 74986252 74986534 282 ATAGAAGGTTTTTTTATTTAA-------CTGTTATGACAGAAATGAAGTCCAAACTATTT-TCAGTTGAATTAATGTGAGACTAATAGCCATGCAGGCAACATCTGAGGTGTTCAGCCTGGGTTCGCATTAAGTTCTAGAGGCAAAAGTTTAGAGCGATGAACAATGTAAATGAATCACCTCTGGGTCTAGGCACTAGAGTATGCTGTAATCGTAGCATAATGAAATAAGGAAGAGACTTTGTCAAATTTGTTATTATTTTAATCTAGAGGAGCTTGGAGATACAACTGT ....xxx..x.x..x......-------..x..x.:.:.:...x:..:---.:.:....:-.x...x....x.x::x.....x....:.x.xx:..:---------.x..x..x.:x:...--.::x..:x.............x...:...x.x:....x....::.........:..:::::..:.:x....x.x........x:....::...........:....x.........:.....::...-------....x.xx:....::.....::.......x.:. 21M7D20M3I9M1D36M9I15M2I127M7I33M 181/261 69.3% 282/94230402 0.0% 29/261 11.1% 8814580 NA +15404 chr4 + 190214555 28059009 28059008 28059372 364 CAAATGTGACATTTATCAGTACTTATCTAAAGAATATCTTAACACCATTTTAGGTTAATTATCGTTATATTTAGG---TCCTAGCTATTTGATTTCTACCAGGCCTGGAAGGGTACTTAATTTTATACTTAAATTTATACTGCTTTGTAGGTGTCCAGTAAAATTAACATTATAAGTAGCTGTGCTCTAAGGTTAATTTGTTCTGTAAAATTACCCATATTTCTCCAGGGCATTCATTAGTGAAATAAAACAGAGAACTAATCTAG----ATGCAGAAGGATTATTGTTATTGCCATATGGTTATTTTTGATAAAATTCCCATTGAGATGACCTCCCAGGGATGGAACAAACAAAGCAGATTATGACAAAT chr4 - 94230402 19245689 19245688 19246055 74984348 74984347 74984714 367 CACGTCTGATATTTATTGAAAGTG--CTATAGAAAACATTATTGCtattatattttaaatataataataCTCATACTCTCCTTAGTATTC--TTTAAAACAGGCCTAGAAGGGTCTATTAAATTGCATTTAAACCCAGTACACTTTGCAGGTGTCCAGTATAATGAAAACTTTAAATGGTTATACTCTAAGGTTAATTTGTTCTGTAAAATTGCCCAGGCCTCTCTAGAGTATTCATTAGTAGAATAAAACAGAGACCTAATCCAGATAAATGCTAAAGGATTATCATTATTGCTGTAAGGATGACTTTGATAAAATTCTAATTGGTATTGCCTCATGGGGATTGAACAAACGAAGCAGATTATGATAAAT ..x:.x...:......:::x.x.x--...x....x.:x...x::.:...x..xx....x...x:.x...:.:.x:---....x:x....:--...xx.x.......:.......x:x.x.xx..::.:.....:::.xxx::.....:............x...x..x.:.x...:.:.:.:.:............................:....x:::....:..:.:..........::.............x......:..----....x:.........::.......::..x..x.:x:.............:x....:x..x:....x::.....x........:.............:.... 24M2D49M3I12M2D174M4I101M 260/360 72.2% 367/94230402 0.0% 11/360 3.1% 8813320 NA +3161 chr4 + 190214555 28094099 28094098 28094185 87 AATAGCACCTATATATTATATATAGTGTGTGTATGTGTGTATACATATATACACACATATATACATTTATATATATACACACATATA chr4 - 94230402 49414727 49414726 49414803 44815600 44815599 44815676 77 AGTAACATGTTTAGTTAATTTATATTGTGTGTATGTGTAGACAGATATACAC----------ACATCCATATGTATGCACACACATA .:..:..:x.x..xx.x..x....x.............:x.:.x.....:..----------....::....:...:......:... 52M10D25M 57/77 74.0% 77/94230402 0.0% 10/77 13.0% -21320628 -72909774 +3078 chr4 + 190214555 28094132 28094131 28094204 73 TGTGTGTATACATATATACACACATATATACATTTATATATATACACACATATATACGTGTGTATATATATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACA--TATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::...:..:......:.......x.......--...x.x.:..::..::.:.x.:.:....x....:.:.:. 32M2D39M 50/71 70.4% 71/94230402 0.0% 2/71 2.8% -43536003 -50694399 +3140 chr4 + 190214555 28094492 28094491 28094562 71 TGTGTGTATATATATACACACACATATATACATGTATATATATACACACATATATACATGTGTATATATAT chr4 - 94230402 71630135 71630134 71630203 22600200 22600199 22600268 69 TACGTGCATGCATATACACACACAAATATACA--TATTTTTGTATGCATGTGTTTGCATGTGAATATGTGT .::...:..::.............x.......--...x.x.:..::..::.:.x.:......x....:.:. 32M2D37M 50/69 72.5% 69/94230402 0.0% 2/69 2.9% -43535643 -50694759 +3769 chr4 + 190214555 28094493 28094492 28094585 93 GTGTGTATATATATACACACACATATA--------------TACATGTATATATATACACACATATATACATGTGTATATATATACAC--ACACACACACACATATATA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .....:..::....x..:.........--------------.....:::....x:.....:x:.....:::x..::.....x....:.--...x.x........:.... 27M14I47M2I19M 69/93 74.2% 109/94230402 0.0% 16/93 17.2% -45026608 -49203794 +3281 chr4 + 190214555 28094508 28094507 28094575 68 CACACACATATATACATGTATATATATACACACATATATACATGTGTATATATATACACACACACACA chr4 - 94230402 7596412 7596411 7596479 86633924 86633923 86633991 68 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:...x..::.....x:.:......:....:...:......x:::....:x..::...:...:.x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 20498096 NA +3224 chr4 + 190214555 28106132 28106131 28106222 91 AAGGAGAAAAAGAAGGAAGG---AAAGAAGGAAGGAAGAAAGAGAAGGAACGAAGAAAGTAAAGAAGGAAGGAAGGAAGGGAGGAAGGGAAGGG chr4 - 94230402 55334414 55334413 55334507 38895896 38895895 38895989 94 AAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAGGG ...::..:::.....x..x:---..:.............x.x....:.:.x:..:...:.:::.x.x..:....:::..:.:x..x.x:..... 20M3I71M 59/91 64.8% 94/94230402 0.0% 3/91 3.3% -27228282 -67002120 +10547 chr4 + 190214555 28109477 28109476 28109875 399 AGATATCAGATTAAATTTATGTATTAATATGCAGAAATCTTCATGTGGCATAAAAAATTTAACACACGAAAGCATACAGCAGCTTACCATTGTACTGCAAATTGTCTCCTGTTC---AAGGGCCTATTTCTTACGTGTTAGACA----ATACAGTGCAGTAAAGCTATATTCCTTTAAGAACATAAAAAAAGGTCAG-GATTATAATGAT-TTCATCAATTTTCAAAGATCCTAATGAGTTTGTATTAAAAATTTCTCTGCTTTTTCAATAACATATAAAAAGTCTTGGACAATTTAGTCTTTCTCTTGCTGTCTTAGCATGTAGC---TGCCAGCCACAGTATTTTATAAATAAAACATTTCAATAAATACTCCATAAAAAAGGCATTTCCTCATGAATATGTGCATTCA chr4 - 94230402 19273067 19273066 19273466 74956937 74956936 74957336 400 AAATTTCATCTGCAGTTCACACATTAATGAAAAGAAACATTCATGCATCATACATAATTTAAAACACTAACACATGAAGCATCTGTTCATTGCAGTTAGATTTGTCTCATGTCCTCCACATGCATATTTCTCTCTTGTTAAAAGTGAGGAATATTAAGATAAATTGATATTTCTTTAAGAAAATGAGCAGGTGCCAGAGTTTATCATGTTCTTTATCAGTTTCAGAAAGGCGTAATGAGTTTGTCTTAAGGG---CTATATTTTT---ACAAAATACAAAAATTCTTT-ACTATTTTTTCAGTCCTCTGCA----TGATATGTGGCGTATAACAGCAACAGCATTCTATAAATAAAACATGTCCATAAATACTTTATAAGGAAGAAACTTCCACATAAGCTTGTGAATACA .:..x...xx.xx.:..:.:::......:x:x.....:x......::x....x.x.......x....x..x:...:x....x..xx:.....:.x.xx:.x.......x...:.---.x:x..x.......:x.x.....:.x:----:x.:.x.:x::....x:x.....:.........x..:.:x.::x.:...-.x....x...x.-..:....:...:x:..::x.x............x....:::---..x.::....---.:..x...:.....x....x-..x....xx..xx..:::...x----.:::....:..---.:x....x....:...:..............x..x.........::....::...:x.:....x...:.::x....x..x.. 114M3I27M4I49M1I12M1I41M3D10M3D20M1D22M4D11M3I82M 260/388 67.0% 400/94230402 0.0% 23/388 5.9% 8836410 NA +3111 chr4 + 190214555 28131433 28131432 28131471 39 TGTGTGTGTGTGTGTGTGACAGAGAGAGAGAAAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ...................x...........:....::. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 9149118 NA +4996 chr4 + 190214555 28209922 28209921 28210104 183 TCCCTTCTTCTTCTTTTTCTTCTTCCCCCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCCTTCCTCCCCTTCCTCCCCCTCTTCCCCCTCTTCCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCCTCTTCCTCCTCCTCCCCCTCCTCCTCCTCTCCTTCTCCTTCTCCTTCTCCTTCTTG chr4 - 94230402 92411536 92411535 92411701 1818702 1818701 1818867 166 tcccatccccttctccttctccattcccatcc---------------ccatccccgtcaccatctccatccttatcactgtcccatccccatctccatcTCATCCCACCTCTGTCTCCTACTCCTCCTCTTCCAACCCCTCTCCATTCCCATATCCTCCTGCTTACTCTCC--CTCCTGCCTG ....x..::.....::....:.x.:...x...---------------..x:....x:.x..x::...x:..:.x:.x.:x:.:.x.....x...:.x..::x:::.x.....x:.....x....:........xx.:....:..x.:.:.x.x::.....x..:x:.....--.....x.:.. 32M15D124M2D10M 107/166 64.5% 166/94230402 0.0% 17/166 10.2% -64201614 -30028788 +4300 chr4 + 190214555 28209946 28209945 28210088 143 CCCCCTCCACCCCTTCTCCCCCTCCTCCCCCTCCTCCCCTTCCTCCCCTTCCTCCCC----------CTCTTCCCCCTCTTCCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCCTCTTCCTCCTCCTCCCCCTCCTCCTCCTCTCCTTCTCCTT chr4 - 94230402 93339618 93339617 93339770 890633 890632 890785 153 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTT .:....x..x...xx.......:x::.x.:.......x::x....:xx..:.....:----------:...:.x:..x....:....:..x...::.:..:.....:x........::x:xxx::x....xx..:.....:.xx.x..:.:.. 57M10I86M 90/143 62.9% 153/94230402 0.0% 10/143 7.0% -65129672 -29100730 +3061 chr4 + 190214555 28210656 28210655 28210713 58 TCATTTGTGTTAATAACACAAACATTACCCTGGATATTTTTAACATTTCAAAGCAATT chr4 - 94230402 49887189 49887188 49887246 44343157 44343156 44343214 58 TCATTTGTATTGTTATTCCAAACATAACCCTGGATATTCCTGACAGTTCTAAGTACTT ........:..:x..x:x.......x............::.:...x...x...:.x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -21676533 -72553869 +3700 chr4 + 190214555 28214029 28214028 28214128 100 AAGAAAGAAGGAAAAAGGAAAGAAAGAAGGAAGGAAGGTAGGGAGG---------AAGGAAGGAAGGACAAAAGAAAGAAAAAGAAAGAAAGAAAGAAGAAAAGAAAAG chr4 - 94230402 44053989 44053988 44054096 50176307 50176306 50176414 108 AAGAATGGAGGAGAAAGAAAAGAAGGA-GACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAG .....x.:....:....:......:..-.:x.:...::.:......---------...:...:...:.x.x..:..x...x.x:..::.x........x..x:x..... 27M1D18M9I54M 71/99 71.7% 108/94230402 0.0% 10/99 10.1% -15839960 -78390442 +3044 chr4 + 190214555 28214049 28214048 28214121 73 AGAAAGAAGGAAGGAAGGTAGGGAGGAAGGAAGGAAGGACAAAAGAAAGAAAAAGAAAGAAAGAAAGAAGAAA chr4 - 94230402 20486974 20486973 20487046 73743357 73743356 73743429 73 AGCAAGTACAAATGAAGATAGGGAGGGAGGCGGAGCAAATGAGAGAGAGAAAAAAAAAACAAGTGAAAGGAAA ..x...x.x:..x....:........:...x:.::x::.::.:...:.......:...:x...x:.:.:.... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 7727075 NA +25396 chr4 + 190214555 28225731 28225730 28226193 463 TGGACAAGGTTGGATGCATAGAAATTGCTATTATAAAGGTTA--------GAGGGAAAATCC-------TTGTACTAGAGTTGACATGCTGTATTGATCCA-TATGAAATCCAACCATTACTGAGACAGATGGGGGAGCTCTGAGACTCTCAATCCAAAA--ATTGCATCCGTTATTGCTGATGCTGCTGT-ACATGCTGACAATAGCTACAGTCTGAAAAGCAGGGTTTACATGCCTGAAATAAATTGTTTTGATTAGAACCTTTAGGAGAGAAAGTCATAAGGTACAGTTTTATTGACTACTTGCCAAACAACACGGACCCATGCACCGTAAGCTTGTTTTGCTCTTGTAAGTCAAGCAACAACTAGGCTTTTATTTTCTAACATTATGGACTTAGAGTATAATATATTGTCATTTACTTTGAATTATTGCACACGTGGCATTTTAGGAAATGG------TATTAATTTTCAAGTATTGCTGACTT chr4 - 94230402 19313707 19313706 19314189 74916214 74916213 74916696 483 TGGAAAAGATTTCAGTTACTGAAATAGTTATTATAAAGGCTACTAAAATCTGGAAAAAAGCCACATTTTCTATACTATAGCTGACAAGTTGCATTGATCTAGCAGGAAATCTATCTTTTACTGAGACAGATGGGGGAGCTCTGGGACTC--GGTTTAACATGGTTGCA---GCTACTGCAGATGCTGATACCGTATACTGACAATAGCTGCAGTCTGAAAAGCAGAGTTTACATGCCTGAAATAAATTGTTTTGATTAGAACCTTTAGGAAAGAAAGTCATAAGGTACAGTTTTATTGACTACTTGCCAAACAACACAGACCTGTGCTCTGTAAGCATGTTTTGCTCTTGTAAGTCAAGTACCAACTGGGCTCTTATTTTCTGAGGTTATGGACTTACAGCATAATACATTATTATTTACTCTGAATTATTACACAGACAGTATAATGGGAAACAGAATGCACATTCAGTTCTAAGTGTAGTTGACCT ....x...:..xx.xx:.:x.....x.:...........:..--------x:.::....x..-------:.:.....x..:.....x.:..:.......:.-:.x......:.x.:x..........................:.....--::.::..x.--:.....---.:..:...x.......x.::-::..:............:...............:............................................:..............................................:....::...x.:......x......................:.x.....:....:.........:.x:...........x..:......:...:.:.......:.........:....x:::.:..xx.:.....::.------:...x.x..::....:.x.:....:. 42M8I12M7I32M1I47M2D9M2I6M3D20M1I264M6I26M 369/458 80.6% 483/94230402 0.0% 30/458 6.6% 8912024 NA +3178 chr4 + 190214555 28238289 28238288 28238376 88 CCTCCCTTCCTTCCTTTTTCCTTCCTTCCTTCTTTTCTTTCCTCCTTCCTGTCTTTTCTCTCTCCCTTCCTTTCTTTCTCTCTTTCTT chr4 - 94230402 15446132 15446131 15446219 78784184 78784183 78784271 88 CCACCTTTTGCCTCTTCTTCCCTCCAGTATTGCCTTTTTTCTTTCGTTTTGTTTTTTCTCTTTGCCTTGCTTTCCCTCAATCCCTTTT ..x..:..:x:::...:....:...xx:x..x::..:....:.:.x.::...:........:.x....x.....::..xx..::.:.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 12792157 NA +3183 chr4 + 190214555 28283563 28283562 28283613 51 AAACCCAAATCCAGCAGCAGAAAAACAAAACAAAACAAAACAAAACAAAAA chr4 - 94230402 44361485 44361484 44361535 49868868 49868867 49868918 51 AAACCCAAAGCCTGCATCAAAAAAACAAAACAAAACAAAAAAACACCCAAA .........x..x...x..:....................x..x..xx... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% -16077922 -78152480 +3107 chr4 + 190214555 28301396 28301395 28301451 56 AAAAAAAGGAAGGAAGAAGGAAAGAGGAAGAAGAAAGGAATATAAACATGATTAAA chr4 - 94230402 47789432 47789431 47789487 46440916 46440915 46440971 56 AGAAAAAGAAAGGAAAAGGGAAAGGGGAAGGGGAAGAAAATGTTAACAGGATAGAA .:......:......:.:......:.....::...:::...:.x....x...x:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -19488036 -74742366 +3182 chr4 + 190214555 28301752 28301751 28301788 37 TGTGTGTGTGTGTGTGTGACAGAGAGAGAGAAAGAGG chr4 - 94230402 18982315 18982314 18982351 75248052 75248051 75248088 37 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGG ...................x...........:..... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 9319437 NA +3277 chr4 + 190214555 28333701 28333700 28333777 77 TTCATTTCTTAATTAAATTCTTGATTATAGAATTGTTTAACTTGCATTTTTCCTGGTTAATTTTTTTCTATTTTTTT chr4 - 94230402 59462934 59462933 59463010 34767393 34767392 34767469 77 TTTTTCTCTTCAAAAAGATCCTGTTTTTAGAATTGTTTAAATAGCATTTTTCTCCACCAGTTCTTTTTTATTTATTT ..:x.:....x.xx..:x..:..x..x.............x.x.........::x:::.:..:....:.....x... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -31129233 -63101169 +3080 chr4 + 190214555 28340686 28340685 28340769 84 AGGAGATGGAATCCATCAGTTTTGTTTTGTTTTTGTTTTTTTTTCTGTGGATTTTCAGATATCCACCTATCCTAGCATTTTTTT chr4 - 94230402 45536938 45536937 45537013 48693390 48693389 48693465 76 AGAATATGAAGGCCTTCAGTTTTGTTTTTTTGTTGTTGTTGTTTGGTTTGATTTTTAGATAACCA--------AACATTTATTT ..:.x...:.:x..x.............x..x.....x..x...xxx.x......:.....x...--------.:.....x... 65M8D11M 58/76 76.3% 76/94230402 0.0% 8/76 10.5% -17196252 -77034150 +13739 chr4 + 190214555 28401088 28401087 28401562 475 TTTCAGAAAAATAGAATTCCAAAAC--ATCTAATTAACTTCTGGCTAAAAATAATGAGTTTTTCCCATTTTATCTTTTCTTTTTCTTCTAGTGGGTCTCACTTAGTAAACTGTTTAGGTTGCCTCAAGATATAAAATCTGTCAAGAACATTATTGAGACATGGGGGATGGTTCGTAGAATCTTCTCCGTCAGAATAGATGACAACTAATTATAGTCCAGAAACTGGAAAACCCTGGGGAAGACGGAAAGTCTGAGTCTGCCCAGATAAGGTTGTTTGAGGCTATTTTTGATGGTTAGAGTATTTATGAGTTGTATTAATAATAAATGAACTAATGTTGTAGCACTAAAATATGAAAACATTCTTATTTGACC----ATGAGAAATTTGCTTGCCTGGCAACAATAATAAAAAGAAAATAAACATTAAATAATAAATTACTTCTTTAAAAGAAAGTTTT-----TATGCAATTCTTTAATATTCATA chr4 - 94230402 19379947 19379946 19380394 74850009 74850008 74850456 448 TTTTAAAAGTTTAGAA----GAAACTAATCtaattatatttttgtaaaaaaaaaaataaCCTCTCCATATTG-CTCGTTTTTGTTTTCTAGT----------TAGTCAAATATTTTAGTGGCTGTAGGCTATAAAATCTGTCAT-----TTATTGTGAGAAATGGGGTGG--AGTAGAGTTCTTCCCGTCACAGCTGATGATACCTAATTATATACCAGAACATAGAACTCCCTGGGGAAGAAAAGAATTCAGATCATGCTCAAGTGCAATTGTTTAAGGCTATTTTGGATGGTGCAAGTATTTATGAGGTTCATTAATAATAAATGAACTAATGTTGTAGCTCTACAATTTGCAGACAACCTCATCTGACCGTTGATAAGATTTTGGCTT-TCTGGCAATAAT----AGAAGTCCATAAATATTA-----------ATGTCCTAAGAAAAAAACCTTATCACTGTATAAATTTTGAAAATACATA ...:.:..:xx.....----:....--.........xx..:.x.:x.....x..x:x:x::.::....x..:-..:x.:...x.:.......----------....x..x.:...x:..x..:x:.:.x..............x-----......x..x.x:x...:...--x.....:.::.::......x.::x.....:.x.........xx......xx.:...xx............x:::..x..x..x:x...:..::.:x::......:..........x......xx:............x.x:.............................x...x...x..x.:...x:..:..:.....----..:...xx..x....-:.......:...----.:...xxx.....:....-----------.:x..:.x.:..:...:::..-----.:.::..x.:..x..x..x.... 16M4D5M2I45M1D19M10D42M5D21M2D200M4I15M1D12M4D18M11D21M5I23M 310/437 70.9% 448/94230402 0.0% 49/437 11.2% 9021141 NA +3435 chr4 + 190214555 28415731 28415730 28415778 48 TATGTGTGTGTGTATGTGTATATTTGTGTGTACATAAACACACACACA chr4 - 94230402 25393260 25393259 25393307 68837096 68837095 68837143 48 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACA .:....::.........:.:..............:.x......:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 3022471 NA +3117 chr4 + 190214555 28440270 28440269 28440345 76 TCTAGAATTAACTATCTTAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGA chr4 - 94230402 44177672 44177671 44177747 50052656 50052655 50052731 76 TTTAGAATGGAATATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGA .:......x:.x...:.:x..x:x...............:....:.:.x.....x:x..:.::.:..:.:.:.x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% -15737402 -78493000 +3263 chr4 + 190214555 28440288 28440287 28440355 68 AAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAGAGAAAGTGA chr4 - 94230402 30973306 30973305 30973373 63257030 63257029 63257097 68 AAAGCTAAAAAGACTAAAAAAAGAAAAAAAGAAAAAAATGGAGCACTGAAAAGAATGGAAGAAATCGA .....x.....:.xx.......:.......:.......x::.:x.xx........x.::.....x:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -2533018 -91697384 +3090 chr4 + 190214555 28440290 28440289 28440360 71 AGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAGAGAAAGTGACAACT chr4 - 94230402 24662126 24662125 24662196 69568207 69568206 69568277 71 AGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACT ...x..................:.xx:..:x:.::....:.:.x...::...:.x.:..:.:.x:.:.... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 3778164 NA +3004 chr4 + 190214555 28440296 28440295 28440358 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAGAGAAAGTGACAA chr4 - 94230402 72165101 72165100 72165163 22065240 22065239 22065302 63 AAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATAAGGAGAAAGAATTATAA ....x.....x..:.:.......:.......xxx.x..:.....x..:....:.:.:.x.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -43724805 -50505597 +3037 chr4 + 190214555 28467805 28467804 28467856 52 CATATGTGTGTGTGTATATATATATATGTATATATATATATTTTTTTTTTTT chr4 - 94230402 42757854 42757853 42757905 51472498 51472497 51472549 52 CATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTT .........:x..:.....:.:.x...:...:.....x..:......::... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -14290049 -79940353 +9964 chr4 + 190214555 28490387 28490386 28490686 300 ATAGCTTCTTATCATTTAATTATTAGCAGCCTTAGCTAATCATTAATTATGCACTGTCAATTATGCTTACATTATTATTTGAAATGGATACAATATCTGACTGATTTGACTAAAATAACCCCCTTG--TTTAATTGTCAATTTGCATAAATTCAGATGCAATG---AGATGTTGCACAGTGATTCATTAGGCATT------GAAAACAGCAGCAACA----ACCTGAACGACGGGAGGCTCAGTCTTGCAAATTATTGCCATTTTCATCAGGAAAG--GAATTCCATTACAACTGACTTTCCTTAGTCTGAAATTGT chr4 - 94230402 19402608 19402607 19402914 74827489 74827488 74827795 307 ATATCATCTTATCATTTAATTATTAATAGTCTTTGTAAATCATAAATTATGTATTATAGATTATGCTT---TTACAGTTTTAAATAGACACAA-ATCTGATTGATTTGACAAAAATAACCTTGTTACCTTTAATTGTTGATTTGCATAAGTT----TGCACTGGAAAAATATTTCATACTAGTTCATTAGTCAGTGCTGAAGATGAGAGCTGCAACAGTATATCTGAATGAGATAAGGATAAATTTATTAAAATACAGTCATTACTACATGCAAAGGTGTATCCTGTTGAAACTG--TTTTCTCAATTTGGAACTGT ...x.x...................::..:...x.:x......x.......:.:.:.x:.........---...:x:...x....:..:....-......:.........x.........::x..:--.........::..........:..----....x..---.:..:..x..:.x.::........x..x.------..x:.x...x......----.:.....:..x:x:...x.x.:.:.xx:...x..:x.:....x::.:xx.x....--.x..:.::..:x.....--...:..:.:.:..:..:... 68M3D22M1D32M2I24M4D7M3I29M6I16M4I55M2I17M2D20M 211/290 72.8% 307/94230402 0.0% 27/290 9.3% 9087779 NA +3625 chr4 + 190214555 28500051 28500050 28500122 72 CTGCAACCTCTTCCTCCCGGGTTCAAGTGATTCTCCTGTCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xxxx..:.:...........x...x.xx.x........:............:.:....x.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 10302925 NA +3367 chr4 + 190214555 28509636 28509635 28509741 106 CCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTTTCCTCT chr4 - 94230402 15266895 15266894 15267000 78963403 78963402 78963508 106 CCTTTCCCACCCCCCTTCTCATTTTCAGGCTTTATTTCCTTAACCTTTGATTTCAGTCTTACTTTTTCTACATTTTTCTTAACTTTTTTCTTTTCTTTTTTGCTCT ....:.::x.::..:....:x:....xxx....x....:..xx:.:..xx..:.xx:...x...::.::x:x.:......xx:..:...........:...x.... 106M 66/106 62.3% 106/94230402 0.0% 0/106 0.0% 13242741 NA +3021 chr4 + 190214555 28518548 28518547 28518590 43 CAAAATTCACTTTAAAGCCAGCTTTTTTTTTTTTTTTTGCATA chr4 - 94230402 72247476 72247475 72247518 21982885 21982884 21982927 43 CAAAGTCCTTTTTAAAGTCAACTTTTTTTTTTTTTTTTACATA ....:.:.x:.......:..:.................:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -43728928 -50501474 +3990 chr4 + 190214555 28540136 28540135 28540264 129 TTTTTCCTTCCTTCCTTCCTTCCTTCC--TTCCTTCTTTCTTTCTTTCT---------------------TTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTCTTTCTTCCTT chr4 - 94230402 9693684 9693683 9693835 84536568 84536567 84536719 152 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .....x.:.:...xx.::......:..--.:......x.:.x.......---------------------....x:.x.x.xx:.....:.....::.:.::..:.:..::.:x...:..x...:.x.:x..:...:.....::.:.:.... 27M2I20M21I82M 86/129 66.7% 152/94230402 0.0% 23/129 17.8% 18846452 NA +3036 chr4 + 190214555 28540141 28540140 28540201 61 CCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 68014332 68014331 68014392 26216011 26216010 26216071 61 CCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATT .....:::...:..:x.....:..::::.:.:.::x...................x:.x.. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% -39474191 -54756211 +3064 chr4 + 190214555 28557321 28557320 28557368 48 GCAACAAAAGAGAAACTCCATCTAAAAAAAAAAAAAAAAGTACTTACA chr4 - 94230402 88059686 88059685 88059733 6170670 6170669 6170717 48 GTAACAAAAAACAAGTTCCATATAAAAAAAAAAAAAAAAGCACACACA .:.......:.x..::.....x..................:..x:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -59502365 -34728037 +3484 chr4 + 190214555 28558196 28558195 28558286 91 CTCTTCAGTAGAGGAAGACCTTCTCTTTCTTTCACTTGGAAATGCCCCCCCCCCCCCCCCACACACACACACACACGTTTCTTGTTAATTT chr4 - 94230402 30040808 30040807 30040891 64189512 64189511 64189595 84 CTCTTAAGTACCAGCAGAAGCATTATTTCTTT-ACTTC------CCCCCCCCCCCCCCCCCCACACACACACACACCTTTTTATTTATTTT .....x....xx:.x...xx:x:.x.......-....x------................x...............x...:.xx...x... 32M1D5M6D47M 66/84 78.6% 84/94230402 0.0% 7/84 8.3% -1482612 -92747790 +3119 chr4 + 190214555 28558240 28558239 28558292 53 CCCCCCCCCCCCCCCCACACACACACACACACGTTTCTTGTTAATTTGATTTT chr4 - 94230402 30040847 30040846 30040899 64189504 64189503 64189556 53 CCCCCCCCCCCCCCCCACACACACACACACCTTTTTATTTATTTTTTGTTTCT ..............................x:x...x..xx.xx....x..:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -1482607 -92747795 +3172 chr4 + 190214555 28560181 28560180 28560299 119 ATGAATGAATGAAAGGAATGAAAGGAAGGAAGGAAGGTGAGAAGCTGGGGAAGGGGACAGAAGGGAAGGAAGGGAAGAGGAAAGGCTAGAAGAAGAGAAGGAGGGAAAGAAGGAACAAA chr4 - 94230402 57710531 57710530 57710649 36519754 36519753 36519872 119 ATGCTTGACTGGGGAGAATTAATGGCTGAAAGGAAGGAGAGATGCTCCAAGACAAGAAAGTAGGGAAGCAGTGGCAGAGGACGGCCCTGGCATAAAGTTGCAGGCAACACAGGAACAAA ...xx...x..::::....x..x..xx.:........x....x...xx:::.x::..x..x.......x.:x..x......x:.x.:x.:x:x.:..xx.x...x..x:x......... 119M 74/119 62.2% 119/94230402 0.0% 0/119 0.0% -29150350 -65080052 +3161 chr4 + 190214555 28571577 28571576 28571672 96 AGAGAGGAAGAATATTTGGGGAGAGGGTAGTTTTATTCAAATATGAAGTAGGGAAGGCATGAGAAAGAAGAGAAGAGAAAAAATGATGAATTTTGG chr4 - 94230402 5069636 5069635 5069731 89160672 89160671 89160767 96 AAAAAGGCTAACTATTCTGTGAGAAGGCAGCATGAACGAATCATGAAGAAGAGAAGGCATGTGGGTGAAAAAAGTTGAAAAAATGGATAACTTCGG .:.:...xx:.x....:x.x....:..:..:x.x.x:x..x:......x..:.........x.::x...:.:.:xx.........:xx..:..:.. 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 23501941 NA +9608 chr4 + 190214555 28584447 28584446 28584663 217 TGTTATCTGAGAAAAGCAAAATGGCCCTCTAGGTAGAACACTACACCATGAGCTCCAGGAGATAAGGTGATATGAATAGGGAGAGACTGGAAAATGTGATAGGCAGAGCTGGCTTTAGGCA-TTTGGGTTGCTAAGGGAGCCCAC-ATATGCCACAAGCTCCCCAAGGATCATTTTAGTCACTCATTTAGCATAACCTGGGGTTGGAATGTGATGTGTA chr4 - 94230402 19425795 19425794 19426013 74804390 74804389 74804608 219 TGTTATCTGTGAACTGCAAAATGCCCCTACAGGAAAAGCACTGCACTGGGGCTTCAGAGTGGCAAGATTATATGAAAAGAAAAAGACTATAAAATATGATAGGCAGGGCGGGCTGTAGGCACTTTTGGTTGCCAAGGAAGCTTGCAATGTTCGGAGTGTTCCCAAGGGAACATTTTAGACACTCATTTAACATAAGCTGTAGGTAGAGAGTGATGGGTA .........x...xx........x....x:...x.:.:....:...::x.:x:..x::.x.::...:.x.......x..::.:.....:x.....:..........:..x....x......-...x......:....:...:::.-..:.x.x:x:x.:....x.:...x........x..........:.....x...x:.x.:..:x......x... 121M1I23M1I73M 156/217 71.9% 219/94230402 0.0% 2/217 0.9% 9158652 NA +3234 chr4 + 190214555 28643539 28643538 28643598 60 TCCCAGGTTCAGGTGATTCTTCTGCCTCAGCCTACCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197140 18197139 18197199 76033204 76033203 76033263 60 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.::......:...x...x:xx.x........x:.:.........:......x...... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 10446399 NA +15557 chr4 + 190214555 28702434 28702433 28702953 520 TCTAAGTGA--TCCACAGCCACTACAAAAAAAAAAGAAG--------------AGAAAAGAAAGAAAAAACAATGACAGCCCAAAAAGAAAAAAAAAAAAGAAATAGTAAAAAATAATGCTGTGTCAAAAGCGAGAGGAGCCACATTACATATGAATTAAAATAATCTTCTCTTTTTGTGTTTTTTAAAACGATATCAACATGCACAGTGCTTGGCATTTTCAAGGAAAGTGTCTCATTTCCATTAACAAGGAAATCTCCTAATTCACAAATACACACAGTGGGTGATGTGTGTTAACAGCACTCTTAGCAGCCGATAATGTGGTGCAGTTAATGTATCTCAGCTTGAATTAACTTTACCACAAGCGATTGTTTCTTTTT-ATACAGCACAGGATCGTGTGGGAAAATCTCTTAGAATCTCACAAGGGGAATTCAATTAACATTACTCACTACTGTACAGTAACA--TAAAATGGAGGCTATTTTAACCTTTTTTGAGTTTCCAGCTGATCAATTCAATGCTTTCCATTAGTTTAACTC chr4 - 94230402 19457474 19457473 19457948 74772455 74772454 74772929 475 TCTCAGTGAATTCCCAAAGCACAACAACAGAATAAAAAGTGTATGTACTTCCCAGAGTTAAAAGAGGGAATAACCACAGG--GGAAAAAAAAAAAAAAAAAAAGTACACAAATATAAAGGTG---------------------CATTCCCCATG--------------CCTCTT----------------------CCAAATGCCCAAGTCTTA-CAATTTCAATGAAAATGGTTCAATTCCATTAACAAGGAAACATCCTAATTCACAAATAAACACAGTGGGTAATGTGT--TAATAGTACCATTATCAGCTGATAACATGGTGCAGTTAATGCATCTCAGCATGAGTTGACTTTACCACAAGCCATTGTTTCCTTTTAAAACAGCACGAAATCTTG-AGAAAAATCTCTCAGGATCTCACTGTGGGGACTTAATAAACATTAGTCACTACCGTGCAGAAACAGGGAGGAAAAAAAGTACTTTAAAAATCTTCT-GTTCCATGCTGTTCTATTCAACCTTCTTTAATTAATTAGTTC ...x.....--...xx.:x...x....x.:..x..:...--------------...:xx:.....:::..:..:x....x--::...:............:..:..xxx...x....x.x..---------------------....x.x:...--------------:.....----------------------.x.x....x..:xx...:-..x......x....:..x:...x.................:x................x...........:......--...:..:..:x...x....:.....::..............:........x...:..:..............x........:....-.x.......:::...x..-:.:.........:..:.......x:x...:.:.:...x.......x.......:..:...x....--x.::.x::.::x..:.....xxx.:..:x-...:.xx....x..x......:x:.:.::.x.x:x...::.. 9M2I28M14I27M2D40M21D11M14D6M22D18M1D77M2D86M1I18M1D65M2I29M1D42M 336/456 73.7% 475/94230402 0.0% 83/456 18.2% 9244960 NA +3077 chr4 + 190214555 28724071 28724070 28724121 51 AGCAAGATAAAATTAAAACATTAAAACTAGGTGTTTTTTTTTTTTTTTTTG chr4 - 94230402 89296669 89296668 89296719 4933684 4933683 4933734 51 AGCAAAATAAAACTAAAATAATAAAATAAGGGATCTTTCTTTTTTTCTTTG .....:......:.....:.x.....:x...x:.:...:.......:.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -60572598 -33657804 +3260 chr4 + 190214555 28738085 28738084 28738176 92 GGAAAAGAAAGGGAAACAAAGAAAGAAGAGAGGAGAGAAGGAAATAAAAAGGAAGGAAGAAAGGAAGGAAAACAGA--AGGGAGAGAGACAGAA chr4 - 94230402 62605347 62605346 62605440 31624963 31624962 31625056 94 GGAAAGGCGATCGAAACGAGGCAGAAAGATCCGGGAAAAAAAAATAATAAAGAAGCAAGAAAAAAAGGAAAGCGGGCCCGGGAAGGCGGCGGGA .....:.x:.xx.....:.:.x.::....xxx.:..:..::......x..:....x......::.......:.:.:--x....::.x.:.:.:. 76M2I16M 60/92 65.2% 94/94230402 0.0% 2/92 2.2% -33867262 -60363140 +3799 chr4 + 190214555 28739796 28739795 28739887 92 CGTATATGCATGTATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTATATATATATATATATATAATTTTTTTTTTTTTGAGACGGAGTCT chr4 - 94230402 57691392 57691391 57691480 36538923 36538922 36539011 89 CGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATAT---TTTAATTTGCATTTTTTTAATATGAAGTTT ....x:.....::...:x.......:..:x.........::..x.:..:x...x.....---.x......x:x.......:.x.:.:...:. 59M3D30M 64/89 71.9% 89/94230402 0.0% 3/89 3.4% -28951596 -65278806 +3283 chr4 + 190214555 28739815 28739814 28739873 59 GTGTGTGTGTGTGTGTGTGTGTATGTGTATATATATATATATATATAATTTTTTTTTTT chr4 - 94230402 50558510 50558509 50558568 43671835 43671834 43671893 59 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTT ...::.....x..........:.........:..:....x.:.x.x..xxx........ 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% -21818695 -72411707 +3019 chr4 + 190214555 28739822 28739821 28739875 54 TGTGTGTGTGTGTGTATGTGTATATATATATATATATATAATTTTTTTTTTTTT chr4 - 94230402 89821282 89821281 89821335 4409068 4409067 4409121 54 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTT .........x.x...:...................:..:.:::.:xx.:.:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -61081460 -33148942 +3008 chr4 + 190214555 28779871 28779870 28779920 50 CTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTTCTCTTCTTTCTTTCTTT chr4 - 94230402 31754639 31754638 31754688 62475715 62475714 62475764 50 CCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTT .:....x.....:.........:..x....:::.:...:...:..:.... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% -2974768 -91255634 +3151 chr4 + 190214555 28792476 28792475 28792622 147 TGCTTGCTTATTTGTTTTGGGGCATGCAAAATGTTCCCATCATACATATATAT-----AATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATTACATTATATATATATATTATATATT-----ATATATATATATATATTACTTTGGA chr4 - 94230402 3186970 3186969 3187118 91043285 91043284 91043433 149 TGCTTCTCTATTTTTTTCCTGCAATGGAAAAT-------CCATATTTAATTAAGCTTAAATATATATGTGTGTGTGTGTGTGTGTCACTACATGCATTTCAAATATTAAAGGAATTTATTGCATATCAACTGAAATGTCTTTATA-ATTGCTTCAGA .....x::.....x...:xx.xx...x.....-------:....:x..xx..x-----.........:.................xxx..:..::..x.xxx.:....x.x:x..x....::....:-----.x..:.x.x....-...:...::.. 32M7D14M5I69M5I13M1D11M 96/139 69.1% 149/94230402 0.0% 18/139 12.9% 25605506 NA +3103 chr4 + 190214555 28792531 28792530 28792582 52 TATATATATGTGTGTGTGTGTGTGTGTATATATATATATATTACATTATATA chr4 - 94230402 48089507 48089506 48089558 46140845 46140844 46140896 52 TATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATA ......:.:........:....x.x..:.:.:.............:x.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -19296976 -74933426 +3190 chr4 + 190214555 28792541 28792540 28792584 44 TGTGTGTGTGTGTGTGTATATATATATATATTACATTATATATA chr4 - 94230402 63396167 63396166 63396210 30834193 30834192 30834236 44 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATA ...............:..............x.....xx.:.... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -34603626 -59626776 +15731 chr4 + 190214555 28801778 28801777 28802394 617 TTAAGTTCAAGGACACACAAGCAATGAATTGCAGAATGCCAGGCTCCTGGTAATCCAGGAAATGGTCTCTTCTAACCCCTGTGCATCCTCTCATTTAGTTTGGTTTCTAAATGAGGACACAAACACCTGTTCCAGCAGCAGGTGGTATTTGTTTATTATAGCTTTACCTGCTGGGTTTTAATAAGTCTGCAGCTGTAGGAACCCGCTTAAGTAACAGTTTATAGCACCAGATTTTTACAGAGTGGTATTTTCCAT---GAAGAAGCAAAGTTTTATATAACACTTTCATCATGCACAAAACATCATATAAGCAGCTTTTATTTCTCCATCTCTCTTTCCCTAACATTTAGGACTACTAATTAGTGAATCATTTCACATGCAGAGTTGGAAAGCTAAGCACTTATTCCTCTGCCTTGAGGGAGACTCCGTGTTCTGTGCTCTCATTACAAAATCTTCATTTCTTAGAGAAAGAGCAACGAAACTCTCTCGGCTTGTGCTACTTCTCTTTTGTATGCCTCAGAAGGATTGTTAAGGCGACTTCCATCTTAGAAGGGAAGACAAAAATAA--GATCAAAACAATCAATAGGATAAAAGAGAGCACTCCATGTAGATGAGAATGAA chr4 - 94230402 19497620 19497619 19498188 74732215 74732214 74732783 569 TTAAGTTCAAGGACA-AGTACTAACAAATTA----------------TGTCAATCCAAATACTGATCTACTTCAGCCCCTTGGCATCTTCTGCTTTACTTTGGTTTCTAAATGAAGACACAAACACCTGTTCTTGCAGCAGGTGGTATTTGTTTATTATAGTTCCTCCTGCTGGGTTTTAATCAGCCTGCAGCTGCAGAATCCAAGAAAAATAACAGCTTATAGTACCAGATTTTCATATATCAGCAATATTGATTCAGAAAAAAAAAAA--TCATACTTTATTTCCATCATATGTTACCAATCATGTAATC-------------------TTCTCTTTCTTACACTTCAAGTTGTTAATTAGAGAATTAATTCAT-TATAATGCTAGTAAATGACGTTTTGAACAGTATGCCCTGAGGGCGATATTTGAATATGTTCTCCTATTGCAAAGTCT--AATTTTCGGAAGAAGATTCCCAAACCTCTGCCAATTTGTACTCTTTCCATTCTTTAC-TTTGAGAAGTACTGTTCAGGGAGAATC-------AAAAGGCTTAAAAAAATAATCAAGCAACA-AATTAACAGCATGTAA---ATCCTTCCATTCAGATGCAATTGAA ...............-.xx.x:..::....:----------------..x:......::x.x..:...x:.::.:.....xx.....:...xx....x................:.................:x...........................:.::x................x..:.........:..:.x..x:xxx..:......:......:..........:.:.x.x::.:.x.x.:x..---...:..:x...:--.:...:xx:.:..:......::::x.xxx.....:...x.-------------------:...:.::..x...:..x::::.::.......x....:.x....:-.::.:x.:.:.x..::x.x.:x:.x.x:xx.x....:......x..:x::xx:x.x...x...::...:....:...--.x..:.::..::....x:xx.:..x....x:.:::....:..x:...:x..:.x..:-::.x.....x.:....x...x::xx..-------:..:..xxx.x........--:.x...x.-...:..:..x..:x..---.x.x:.....x:.....x:.x.... 15M1D15M16D208M3I12M2D40M19D45M1D77M2D57M1D27M7D19M2I8M1D16M3D25M 376/564 66.7% 569/94230402 0.0% 58/564 10.3% 9304158 NA +49600 chr4 + 190214555 28891114 28891113 28891975 862 TGTGTCACAGCCATTTTGTGCTCAATTCT---TCTAACTATAAAGGCATGGTGTTGTCATAATACATATTTAGCTTCTAAGATTGATGGATTGCTTCAGTGAACAAGTTTATACAGCATTTTTTTTCTTATCTGAGTCAATGTTTTCCTCAATACCATGAAGTAAATTAAAATAGAGTGTTTAAATCTACTGCTTGTGATAAAGAAGACCAAATCTTATTCTAATAAATGTGAAATGCAGCTTGTCACGTTCCTTTCACTCTGTAGAAATGCTACCACAAGGCTTTGCCAGTTAAGTCTAATATGTTGACATTTATTTTTGCTGCAATAAATGTTAGGATTATATTTTTGCATTAAATTCTGGCATTTTTAAAAGATCACGATGACAAGTAATTTATTCCTCAAATCATTCTGGTTTGTTTTTACTTTTTGAATATGGATTTGGCCATGTGTCTCCAAGGCACAGTACAAAGCATATTTC--ATGTTTTGCAACCTATTAGTTTGATTTAAATCCACTTTTTCCATCTGGATTTATGCAAGCCTTCCTTGATGTTATTTGCTCTGAATTATTGCCCAGAAATAATCACACTGAATCCAATTTTACACTGGCTGTGTGGCCTACCAAGTCTGTCACTGTAAAGCTTTAAGGTTTTTATA-GTTTGTTTCAATGAAGGCAATTTCTCAAA--TATTCTACATATAAATATGTAATATACTGTTTTGACACTCATTTAAGAAATTTTCCTCTACCCTGTCTTAAAAATGGAGTGAATATGATGACGTATCTTAGAAAC---TAAAATTGTTACAAAGTAGAACAACCCAATACATAAAAATAA---------TAGATTGTGCATATTTAATATAAAACCTACATA chr4 - 94230402 19518340 19518339 19519202 74711201 74711200 74712063 863 TATGTCACATACATTTAATGTTATATTTTGTATTCTGCTAGAAAGCTCTAGTGTTGTCACATTACATATTTAGCTTCCAAAATTGATTGACAGCTCCAGAGAA-AAGAGTATATGGTATTCCACTTCTTATCTGAGTCAATGTTTTTCTCAATACTGTGAAGTAAATGAAAATAAAGTGCTTAAATCTACTGCTTATGATAAAGAAGACTAAATCTCATTCTAATGAATGTGAAATACAACTTGTCATGTTCCTTTCACTTTGTAGAAATGCTACCACAAGGCTTAGCCAGTTAAGTCTAATATGTTGACATTTATTTTTGCTGCAATAAATGTTAGGATTATATTTTTGCATTAAATTCTGGCATTTTT-AAAGATCACGCTGACAAGTAATTTATTCTTCAAATCACACTGGTTTGTTTTTACTTTTTGAATATGGATTTGGCCATGTGTCTCCAAGGCACAGTACAAAGCATATTTCATATGTTTTGCAACCTATTAGTTTGATTTAAATCCACTTTTTCTGTCAGGATTTATGCAAGCCTTTCTTGATGCTATTTGCTCTGAATTATTGCCCAGAAATAATCACATTGAATCCAATTTCACACAGGCTGTGGGGCCTATGAGGTCTGTCACTGTAAAGCTCTAAAGCTTTTAAATTTTTTTTTCAATGGAGGAGCTTCTTCAAATTTGTTTAATATACAGCACTTTCTTGTATTATTTTCACATTTACT-----------------CCTTCCCCTTAAAGTGTGAAGAATTCGATTGCATGCACTAAGTATGTATCAGTCTATGAAGAAGGAGAAAACTATAATTTTTAAAAGGAACTGTGTTATTCGAAAGTGCAAAATAAATGAAGAGCCAATATA .:.......xx.....x:..:.xx...:.---.::x:...x....x:x.:.........:.x...............:..:......x..:x...:...x...-...xx....::.:...::x:......................:........::..........x......:....:...............:.............:......:........:..........:..:.......:............:........................x....................................................................................-..........x.................:........:x......................................................................--.........................................::..x.................:.......:...................................:............:....x.......x......:x.:..................:...:.:.....x.-x...x........:...x:x..::.....--.:..:x.:...:.:xxx.x.xx.:..:.:....x...:.:.:.-----------------..:.x:.:.x...:..x::x....x:...x:.:.::x:..::x.:---.x.:x:.:.x.x:...x....x.x:x:...x:x.....:x..---------.x..xx.....x.x.x...:x.:.:..x.:... 29M3I71M1D266M1D109M2I176M1I29M2I43M17D45M3I42M9I33M 691/843 82.0% 863/94230402 0.0% 39/843 4.6% 9372774 NA +3008 chr4 + 190214555 28894241 28894240 28894320 80 ATATATATGTGTATATATATATGTGTGTATATATATGTGTATATATATATGTGTGTGTGTATATATATATATATATATGC chr4 - 94230402 81401293 81401292 81401372 12829031 12829030 12829110 80 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTAC ....x.x.....x.:.:.x..x:x:.:....:...x.x...:..:..x:.........:..x..:.x:....:x..:.:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -52507052 -41723350 +3072 chr4 + 190214555 28894252 28894251 28894304 53 TATATATATATGTGTGTATATATATGTGTATATATATATGTGTGTGTGTATAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...:....:.::........x.......:.x:..:...........:x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 9189975 NA +3003 chr4 + 190214555 28927380 28927379 28927423 44 TATATATATATATGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406428 4406427 4406471 89823932 89823931 89823975 44 TATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ........xx...:x....................x:....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 24520952 NA +3135 chr4 + 190214555 28953894 28953893 28953928 35 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929913 18929912 18929947 75300456 75300455 75300490 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..................:................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 10023981 NA +3095 chr4 + 190214555 28953897 28953896 28953932 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 10023985 NA +3228 chr4 + 190214555 29002047 29002046 29002126 80 AAGAAAGAAAGAAAGAAACAAACAAACAAACAAACAAACAAAGAGAAAGAAAGAAAGAAAGAAGGAGGAAGAAAAGAACA chr4 - 94230402 58286133 58286132 58286212 35944191 35944190 35944270 80 AAACAGGAGGAAAAGAAACAAACAAACAAACAAAAAGCTAGATAGGTTAAAAGTGGAAATGGTTGGGGAAAAAAAAAACA ..:x.:..:::.......................x.:x:.:.x..:xx:....x:::..x.:xx.:....:....:.... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -29284086 -64946316 +16406 chr4 + 190214555 29013375 29013374 29013712 338 AAATCACTTTGACAAATTAAAAACAATTATGTTTTCATCAACATTGAATTACAGATATAAAATATCGTATGGGAATTATAATTTGATAAATGGGAACATTCTGGGTCCCATATTGAGTCCAGATGGTTACAGTGTCTTTAATACATGTATCCATTTGGTATTACCGCATTTGTGTACCACAGTCT---CCTCATTCATGTTTAATGATGGATAGATTCCAAATAATACAAGATGTTCTCCAACATGTTAAACTTATGGTAAGTGATCAGACAGTGAGCTCTCTCTTCCCAGTATACCTTGTAGTCTCAGCATAA-CTGTTTGAAGATAATCTGAATTTCAGT chr4 - 94230402 19566902 19566901 19567241 74663162 74663161 74663501 340 AAATCAGTTTGATAAATTTCACACAATTTACTCTTAATCAACACTGAAATATGAATGTGATGTGTTGCATGGGAATTACAATTTGATAAACAGGAATATTTTAGGTTCCATATTGAGTCCAGATGGTTACAGATTCTTTAATATATCTATCCATGTGGCATTTGCACATTTGTGTATCTCAGTCTTCCTCTCATTTATGTTTAAAGATGGATTGAATCCAAACAATACAAGATGGTCTCCAGCACGTTAATGTTCTGTTAAGTGGACTGATAGTCAGGTCCTTCTGCACAGGAT-CTTTTTTCTTTCAGTGTGGTCTATTCCAAGACAATC-AATCTTCAGT ......x.....:.....xx.x......xxx.:..x.......:....x..:::..:.:.x:.:.:.:..........:...........::....:...:.:...:.........................xx.........:..x.......x...:...xx.:..........:.x......---:......:........x.......x..x......:...........x......:..:.....xx..x..x......:x.x..:...x..x..::...x.x...x..-.:..x.xx.:....::.::-..:..:x....:....-:.x:...... 185M3I106M1D19M1I16M1D10M 256/336 76.2% 340/94230402 0.0% 6/336 1.8% 9446473 NA +3934 chr4 + 190214555 29031181 29031180 29031326 146 TCCCTCTCATTGTCCTC-CTCCTCCCTCTCCTCCTCCTCCCCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTCCCCCTTCCCCTCCTCGTCCTCCTTCTCCTCCTCCTCCTCAT---TCTCCTCTTCCTCCTCCTCCTTTTCCCTGTT chr4 - 94230402 81969972 81969971 81970121 12260282 12260281 12260431 150 TCCCTCCTGGGGCCCTCACTCCTTGCTGTCCTGCTCCTCTCCCTCCTGGGTGCCATCCTCGCTGGTCTCCTTCTCCTCCTTGCTGCGCTTGTTCTTCTTGTGCTTGTGGCGCCGATGGCTCTCCCCTTCCTCGCTCTCATGCTGCTTGCT ......:::xx.:....-.....:x..x....x......:.......xxx:x..x.....x.:xx:....::....:....x.:x:x..:..:..:...x.x..:x.xx:x.:x..---.....:.......x::...x.x:.x.:..:. 17M1I98M3I31M 93/146 63.7% 150/94230402 0.0% 4/146 2.7% -52938791 -41291611 +18014 chr4 + 190214555 29042676 29042675 29043078 403 TAACATTTTTGAGTTTCAGTCATTAGATTTCAGAAAACATATGCAAAATATTCTTCAAAAATTAATTATACAGCAGAATAATACTGATGTTGAAATATTAATAAAGGTCCTGAGAGACTGTTCAGTTATTTTTGCTCCAAATATAGTAAATTTCTCCTCATGTATTATACATTGTTTAAATTTGTGTAACATAAATAATACATA--ACTTAGTCATTTATTTATAAGAGATACACTT--TTTGTTCACCTTTTCTAGTTTCA--CAGCATACTGTTATTCATATTTCTCAGGTAAGCTAATCACCTATGTCAGCTGAGTAT--TGGTCAATGTGCATAAAATGTGAAAC--AATTAAAACGACTCATATTAAATTTGATAAATGCTAAGAAGCATTAAAA---TGGTTAATTGAAA chr4 - 94230402 19574788 19574787 19575201 74655202 74655201 74655615 414 TAAAATTTTCTAGCTTAAGTGATGTGATTTAGGAAAACATATGCAAAATAGTCTTCAAAAATCAATTATACAGTAGTATAATACTGGTTCTGCAATATTAATAAAGGTCCTCAGAGACAGCTCAGTTAATTTTGCTCCAAATACAGTAAATTTATCCTCATGTATTATACATTGTTTAAATTTATGTAATATAAATAATACATAGTAGGTAATATTTTATTTATAGGAAATAAATATAATTTCCTTTTCTTTTGTAGTTTTAAGCCACATATTGTTATTCATG-TACTCAGTTATGCCAATTAGCTATGCTTGTTGAGTGTAATAAGTAATATGCGCAACATTTAAAAATGACTTCAAGCAACCTTTAAGATCTTTCACAGATATTGTG-AGCAATAATATTTTATTTAATCAAAA ...x.....:x..:..x...x..xx.....x:..................x...........:..........:..x.........:.x:..x..................x......x.:.......x..............:.........x.............................:.....:..............--.xx..:.xx..........:..:...x.:x.--...x:.:x:.....x......:.--.x:....:..........:-.x.....x..x..:...:.x.....::x.:.....:.--.::x:...:...::..x..x.:...x--.x..x..:.:..::x..xx.xx...x.:.:..::.:x.-....x...x.---.:x.....::... 204M2I31M2I23M2I19M1D37M2I26M2I38M1D10M3I13M 308/401 76.8% 414/94230402 0.0% 15/401 3.7% 9467888 NA +3225 chr4 + 190214555 29044390 29044389 29044459 70 AGAAATATATATACACACACACACACATACACACACACACACACATGTATATATATGTATATTTTGGAGA chr4 - 94230402 87372734 87372733 87372803 6857600 6857599 6857669 70 AAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGA .:...xx...x.x..x...........x.........:x:.:..:.:.:..::...:...x.:...::.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -58328344 -35902058 +3161 chr4 + 190214555 29044398 29044397 29044450 53 ATATACACACACACACACATACACACACACACACACATGTATATATATGTATA chr4 - 94230402 38535895 38535894 38535947 55694456 55694455 55694508 53 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATA .....:......::...::x:x.:.....:..........:...:....:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -9491497 -84738905 +3350 chr4 + 190214555 29072286 29072285 29072352 67 CTACAGCCCTCATCTTCTGGGTTCAAGCGATCCTCCCAACTCAGACTCCTGAGTAACAGGAACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .........xx.x..............:.x.:.x.xx::.....x..::::....:.x......... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 10875160 NA +4335 chr4 + 190214555 29077265 29077264 29077347 83 CTGCAACCTCCGCCTTCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGACGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx:x..............::x...x.xx.x........::.................--...........::.. 66M2D15M 63/81 77.8% 81/94230402 0.0% 2/81 2.5% 10880139 NA +3260 chr4 + 190214555 29080428 29080427 29080506 79 AACCTCTCTCTCCCTCTCTCTCTCTCTCTATATATATATACACATATATATATACACACACACAAATATATATATACAC chr4 - 94230402 80495410 80495409 80495488 13734915 13734914 13734993 79 AATTTGTGTCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACAC ..::.x.x..:.::.x...:......x.:.......:.:.x...x....::.:......x..xx.:..:.x.:.:.... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -51414982 -42815420 +3289 chr4 + 190214555 29080438 29080437 29080507 70 TCCCTCTCTCTCTCTCTCTATATATATATACACATATATATATACACACACACAAATATATATATACACA chr4 - 94230402 80495418 80495417 80495487 13734916 13734915 13734985 70 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACA .....:.x...:......xx:.......:...x.:.x....::........x..:xx:..:.x.:..... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% -51414980 -42815422 +3029 chr4 + 190214555 29080493 29080492 29080553 61 ATATATATATACACAAATATATATATACACACATATATATATACACACATATATATACACA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ...:.x..::.:......:......:....:...:....:.x...:.:.:x..:::..:.. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 21484080 NA +3273 chr4 + 190214555 29080574 29080573 29080637 64 ATATACACACACATATATATATATATTTGTGTATTTTTTTTTGAGATGGAGTTTCACACTTGTT chr4 - 94230402 5683041 5683040 5683101 88547302 88547301 88547362 61 ATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGA---GGAGTTTTCTGGTTGTT ...............:........:x..x.x.x...........---.......:x::x..... 44M3D17M 50/61 82.0% 61/94230402 0.0% 3/61 4.9% 23397533 NA +3343 chr4 + 190214555 29103026 29103025 29103119 94 TTCATTT-TTCTTTTTTC-------TTTTTCTTTTTTTCTTTTTTCTTTTCTT----TTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTAAGACA chr4 - 94230402 83960512 83960511 83960617 10269786 10269785 10269891 106 TTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTTGAAATA .......-....:.:...-------.:....:...x.....:x.x........----....x:.::...x..:....:.::....x:.x.....:.x...:.:.:. 7M1I10M7I28M4I49M 69/94 73.4% 106/94230402 0.0% 12/94 12.8% -54857486 -39372916 +3830 chr4 + 190214555 29106244 29106243 29106352 109 ATCATTTACTGCAGCCTCATATTCCTGGTCTCAAGTGATCTACCTGGCTCAGCCTCCTGAGGAGCTGGAACAATGAGAGCACGCCACTGTGCCCAGCTTCACTCTTTCA chr4 - 94230402 18197118 18197117 18197219 76033184 76033183 76033285 102 ATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTGTA-----TCATCCTTTCA .....x.x..:.....:x.x::.:....x:.......x.::..xx..........::::..x.........x.::x.x...--........:x-----...::...... 81M2D10M5D11M 72/102 70.6% 102/94230402 0.0% 7/102 6.9% 10909126 NA +3321 chr4 + 190214555 29107378 29107377 29107470 93 CTTTTATTTAATTTAAGGAAAAAAAAAGAAAAGAAAAAAACTACAAAAATAAGTGCAGAAGCTAGAAAATTCTGTTATCCTCATTTTAATCCT chr4 - 94230402 51634619 51634618 51634709 42595694 42595693 42595784 91 CTTATATTTAATTCCAGGGAAAAAAAAAAAAAAAAAAAGGCAGCAACAACAACAAAAAAATCCAGAGTAT--TGACAGCACTATCTTAATTCT ...x.........:x...:........:....:.....::.x:...x..:..xx:x.:..x.:...:x..--..x:.x.x::..:.....:.. 70M2D21M 62/91 68.1% 91/94230402 0.0% 2/91 2.2% -22527241 -71703161 +14823 chr4 + 190214555 29114184 29114183 29114605 422 TGAAGAATACAAAGTC----GAAGTGGAAAACTCTTTGTAAATGCCCTCTGT--AGTACATTTGTCAGTTTCATGTTTTTAACTCCTTCCTGGTTGCTACTGTGGGGACATTTCTAATTCATTCTCATTTGAGAGTCCTCATTGTATCTACTTT-TCAGAGTGCAGCGTTATCTGATGTTATTTCATGCTGAGACGAAACACTGACTATATCAGTAGGGATAACTGCTGAGAAGAAAGAACAAA---ATTGCATATATCTAACAGTCCAGGATTTTCA--CGGGTTGTGCTGAGCTAGAGGATTTA---CTTATATCCCAAAAGGATTGTTTCATAATGTATCGGTTCCTATAAACTTTGAGGCATGC-AAAGGAAGTAAGAACTCAACCACAAGTTTCAGATATGGGTGAATTTTTCAAAATGATCTTATTTTTGTT chr4 - 94230402 19603699 19603698 19604127 74626276 74626275 74626704 429 TAAAGAATAAGAAATTTTCAGCAGAAGAGAGATTTTACTTAAAGTCCCTTGCTAAATACATTCATCAGCTTCTTGTTTGTAACTCT---AGGGCCTCTACTGCAAGAGCATTTCTAATTCATTCTCACTTGCGGAGCCCTGTTTTTTCAACTTCCTCAGAATGCAATGTTATCTAATGTTATTTCATGCTGAGATGAAACACTGACTGTATCAGAAAGGCTAATTGCTGAGAAAGAAGAATAAACATATTGTGTACATCTAATAGTGCAACGTCTTCAATAGGGATATGCTGAGCTGGTGAATTTGCATCATCTATCTCCAATGAATTATCTCATGCAGTATTGGTTCCAGCAAA--TTGTGGTATGTGAAAAGAAGCAAAGGCTGTGCAAAAAGTTTAATCTATACACTGAATCTGGAAAAT----TTATTCTTACT .:.......x:..:.:----.x..x:..:.:x.:..xx.x..x.:..::..:--.:......::....:...x.....x......:---xx..::x......:::.::...................:...x.::x..:::..x.x..x....:-.....:....::.......:...................:............:......x.:..x...:.........::.....:...---....::..:......:...x..:x:.:....--x...x.:.........:.x.:....:---.x.x....:.x..x.:...:.:....:xx....:......x::...--...x..:...:-...:....:..:::..xx:.x.x......x.xx...:x::x:.x.:.xx.....----.....:..::. 16M4I32M2I32M3D65M1I89M3I31M2I26M3I46M2D11M1I54M4D11M 291/413 70.5% 429/94230402 0.0% 25/413 6.1% 9510485 NA +8704 chr4 + 190214555 29125019 29125018 29125165 147 TTTCATGAGAGATTGCCTGCTCACCAAATAAATTCCTTACTATCTATCTATCATGGTCTTCAATTTTCCAACAAAATAGCCTGATTCATCACTGTTATGCCAATGACACTCTGCTCTATCTATCGTTGC-CTACTGATTCCACTGGGG chr4 - 94230402 19609683 19609682 19609829 74620574 74620573 74620720 147 TTTCATGAGAGATTGCCTGCTTGCAAAACTGGTTCCT-ATTATCCATCTATCATTGGCTTCAATTTTCCAATGGAATAGGTTAATTCATCACTGTTATTTTGATGACATTCAGCTCTATCTATCTTTACTCCACTGATCCTACTGGGG .....................::.x...:x::.....-.:....:.........x.x..............:::.....x:.:...............x:::......:..x............x..:.-.:......:.:....... 37M1D91M1I18M 118/146 80.8% 147/94230402 0.0% 2/146 1.4% 9515336 NA +3104 chr4 + 190214555 29155396 29155395 29155529 134 TGAAGAGAATTAGTCCAAGTGCAAACTGAAATGCCAAGGAAGGTAAAGAAAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAACAAACCCTGAA-ATGCTAA---GGAAGGTGAAGAA-------AAAAAGACAAAAAAGAAAACA chr4 - 94230402 28312896 28312895 28313028 65917375 65917374 65917507 133 TAAAGGAAATTAGTCACAGCAAAAAGTCAAAAACTCCTAACAGTTTAGAAAAAAAGACAAAAAAAAAAAGA------------AAATTTTGAAGATACTAGCGTGGAAGATAGCTAACAGCTATAAAAAGACAAAACAACATACA .:...::........xx..::x...x.x...x:.:xxx:.x:..xx.......................:.------------...:::....-..:...:---.....:.::xx..-------............x.:x.x... 71M12D10M1I7M3I13M7I21M 86/122 70.5% 133/94230402 0.0% 23/122 18.9% 842500 NA +3022 chr4 + 190214555 29155436 29155435 29155491 56 AGGTAAAGAAAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAACAAACCCTGAAATG chr4 - 94230402 57960451 57960450 57960506 36269897 36269896 36269952 56 AGAGAAAGAAAAAAAGACAACATACCATGAATGAAAAAAAAAAAAACCCTGAAGTG ..:x................x.x.xx.x:..x:.........x..........:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -28805015 -65425387 +3056 chr4 + 190214555 29167956 29167955 29168060 105 TTAAGTGAAATAAACCAAAGT---CAAATACCGTATGACCTCAGTCATATGTGGAATCTAAATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398771 33398770 33398873 60831530 60831529 60831632 103 TTATGAGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTG-----TGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...x.x......x..xx.x:.---..x.x...:...:.x:x:.x.:.x.x...-----.:x:.:.:.:....:.:.......:.:.............x.....x... 21M3I29M5D50M 69/100 69.0% 103/94230402 0.0% 8/100 8.0% -4230815 -89999587 +20049 chr4 + 190214555 29176296 29176295 29176808 513 TTCAATTGCTTAAGTGTCTTAATTTTTAAAAATC---------TATATGACATGATTTATATTTTATGGAGCACTCTGTCACTTCTGATTGCGTTTGAACTTTT--AAGTAAAAGTTCTTGAGGAAAAATCTGCTTTAATATAAATTCACTTTGTGAATGACAACTTGACAAGAAATATCAGAATTGTGAAGTTTTGAGGATACTGTCACAAAGACTATCTTTGAAACTAGACAAACAATAGTGATATTATAAAGAAGGTCACTTACTGTGATTTTTGGAATTAAAACTTATCCAAGAGTATACACT-TCTACCATGTATAGTGAAAGCAATTTATTGCTGCTTTTCAGTATTGGAAAAGAAAAAGTTCATGCTGTCATTGATTGACCTTTAAAAAGAAAAATGTAGCTGGCTTATGGGTAATAAGAAAGCAATATTTTTTTGCTACCTTTACAAGTAGATTCTTCATTTTTGTCTGTTGCTTAGTTTTTCCATAATTCTATTATAATTTGATTGGATAAACCAA chr4 - 94230402 19617738 19617737 19618236 74612167 74612166 74612665 499 TTCAAATGTTTACCTATCTTGATT---AAAAATTGATTTATAATACATGGAACAGCTTAGACATTATAGATCTCACCCTCACTGTGGACAACTTTTGAACTTTTGTATCTGAAGACTTGGGAAGAAGAAAGAATTTTAATATAACT--ACTTTTTGATTGACAGTTTGACAAGAAATATCAGTATTGTGGAAATTTAAGAAAATTGTCATATAATCTATATTTCTGTCAAAATAAACAATAGTGGTTTTATAAAGAAGGTCACTTATTATTATTTTTGAAATTAAAACTCATCCAACAGTGTACCTGATCCACCATGTATGATGAAAGCAATTTATTGCTGCTTCTCAGTATT------GAAAAAGTTCATGCTGTCATTGATTGACCTTTAAGAAGAAAAATGTAGCTGGATTCTTGGTAA--------AAATATCTTTTTTCT-------CACTCACTTTCTCCATTAGGGTTCACTGCATAGTTTCACAGCACTTTTTTTAAAGTCTGCAAACATAAAGCAA .....x..:...xx.:....:...---......:---------..:...:x.::::...x.:x....:..x.x.x.:x.....x:x..:x:.x...........--.xx.:..:::.:xx..:...:..xxx::..........x.--.....x...x.....::.................x......:.:x...:..:.x.:.....:.x.:x....x...xx:x.x.:.:...........:.x...................:.:.x.......:..........:......x...:...x:x-..:.........::......................:........------..................................:.................x..x.x.....--------x.....:.....x..-------..xx:.xx....:....xxx..::::...x......:x.x::.x..:.x...x.:.:..xxx:x.....x... 24M3D7M9I61M2I40M2D159M1I45M6D63M8D15M7D73M 362/487 74.3% 499/94230402 0.0% 38/487 7.8% 9558558 NA +29317 chr4 + 190214555 29220727 29220726 29221437 711 TTATACATTGCATC-TTTAATTTTTT----TGTTTTGTGTCATTTTT----AAGGGTTACAGAATTTAAGAGAGTATATCACCTGTTAAAA----TAAGACTAGTGTTCTGTCTACATTTTCACCCTCAGGCAACAAGTTGACAAATGGACATGAATTTCACCTCTGAGAGTTTCATAAGCTGGTATTGTCCTGACATTGCAAAGTGTTTACCACAAAGATCCTGTACATCCATCATCCAGGGCCAGCGTTTGCCTGATTCTAATTCCACTGACATTGAAATCTACAGCTCTCTGTGAGTCATTTATCACACTTATTAAAATGTTCCATTGTGAATTGGAATAGCAATTCACTATTATTTCAGAGTGCTGCCCAAGGGGCATTCTATGCAGCAAATCTTAATGCTTTATTGAAATAGTAGTTTGGTTTTAATAAATGATTCTTTGCAAAGGTATCTTGCTTTC-ATTATGAAAGGTGATGTTCGCTTTCTAAATCTGGCATCCTTGCCTAAGATTATGTAGATATCTCGGTTTAATATTGCATTT--TCCTGCCCTAAATAGTCCATCCCTAATATTTGAACAATGATATGTCAATTAGATTAATTAGACTATTGT--GTAAGAAGTATCTTTTAAAATTCTCTTTGAACTGGAGTCAAATTACCAACATATACTGAAGAACTTTG---------AAATAACAGATACATTTCATATGAATAAAAATAAATTTTTTTC chr4 - 94230402 19630778 19630777 19631489 74598914 74598913 74599625 712 TTATTTCTGGCATCATTTAATCTTTTGATTTATTTTTCCTCATATTTGTTAAATATTTCCAGGAGTTACAGAAATGTATCAGATGATAAAGAATGTAAGACATTTACTCTATGTGCATCTATGTCTGCTGGAAATAAGGTGACAAATGGACAGGAATTTTTCCTCTGAAAGTTCAATAAGCTGGTATTGTCCTGACATTGCAAACTGTTTACCACAAAAATCCTCTACATCTATCATCTGGATCCAGCCTTTGCCTGATTCTAATTCTACTGACATTGAAACCTGAAGCCCTTTGTGAGTCATTTATCACACTTATTAAAATGTTCAATTGTGGATTAGAATTGCAATTCACTATTACTTCAGAATGCTGCCCAAGGGCTATTCTATGCAGGAAATTCTAATACTTTCTCAAATCTGTGGTTTGGTCT---TAAATGATTCTTTTCAAAGGTATCATGCTTCCAATTGTGAAAAATGATGCTGACATTTCAAAGCTGTCATCAGTACCCAATATTATGCAAATCCCTTTACTTATTACTCCATTTAAATCTGGCCTAAATACTTCACACTTAAAACTTTAACAA------GTATATTGGATTATATAGAAAACAGTAAGTAAGGAATGGCTTTT---------TGCCAACTG------AATTATAAATATG-ATTTCAGTATTTTGGAAAGTGATAAATGATAAAATCATAT-ATATTAGTGAAGGGATATTCTTTCC ....x:x.x.....-......:....----.:....x:x....x...----..x:x..x...:.x...x:::.:.:.....xx..x....:----......xxx.::...:.x.:...:.x:::.:x.x..x..:...x.............x......:x.......:....:x.............................x.............:.....x......:......::.:x.....x..................:.............:..:x...:..:.................................x......:...:....x..............:......:.............x:...........x....::....:....x.::..x:x..:.......:.---.............x..........x.....:.-...:.....::.....:.x:.x..::...x...x....xx.:..:..x......:.:..x:..:x::...x..:.x.....--x:...x........x.:..:x.:...x.:..x.....------..xx...:.....xx....xx.:x..--.....:.:.:x.....---------.x:x.....------.....:x..:..:-.:.xx..x.:....---------....:.:.:.xx...x.-....x.:.:..::x.x...:...:. 14M1I11M4I17M4I40M4I333M3D32M1I81M2I37M6D26M2I16M9D9M6D13M1D14M9I17M1D25M 518/685 75.6% 712/94230402 0.0% 53/685 7.7% 9589949 NA +3037 chr4 + 190214555 29247003 29247002 29247054 52 AAAAAAAAAAGAAAAGAAAGAAAAGAAAAAATCTATTTGAGCTAGTTTTCTT chr4 - 94230402 80007183 80007182 80007234 14223169 14223168 14223220 52 AGAAAAAAAAAAAAAAAGAGAAAAGAAAGAATTAATTAAAGTCAGTATTCTT .:........:....:.:..........:...:x...x:..::...x..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -50760180 -43470222 +3738 chr4 + 190214555 29258247 29258246 29258320 74 CTGCAGCCTCTGCCTCCTGGATTTAAGTGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTACACGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx:x..:....:..:.....x...x:xx.x........::::.........:...........:. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 11061121 NA +3324 chr4 + 190214555 29259264 29259263 29259353 90 GTGTGTGTATGTACAG-TCTTGTTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACAC chr4 - 94230402 14964794 14964793 14964884 79265519 79265518 79265609 91 GTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...::.x...:..x..-.x....xx.:.:.x..:.:.x.:::.:.::.::::...:........:.xx..:.....::............. 16M1I74M 59/90 65.6% 91/94230402 0.0% 1/90 1.1% 14294470 NA +3453 chr4 + 190214555 29259265 29259264 29259352 88 TGTGTGTATGTACAGTCTTGTTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGT--------GTGCATAAACATGTATTTACATATGTATGCCT------ACATTAATACACACACACACACACAGACACA ...........--------..x....x.:......x..:....:....:x.------.:..xx.....:.............x..... 11M8D32M6D31M 61/74 82.4% 74/94230402 0.0% 14/74 18.9% 20863476 NA +3568 chr4 + 190214555 29259266 29259265 29259357 92 GTGTGTATGTACAGTCTTGTTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACAC chr4 - 94230402 14964794 14964793 14964884 79265519 79265518 79265609 91 GTGCATTTATATAGAGGTGTT-GTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...::.x.:..:..xxx....-:.:x.:.::x....:.x.:::.:..:.:::......:........xx........::............. 21M1D70M 61/91 67.0% 91/94230402 0.0% 1/91 1.1% 14294472 NA +3716 chr4 + 190214555 29259279 29259278 29259356 78 GTCTTGTTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACA chr4 - 94230402 8395785 8395784 8395862 85834541 85834540 85834618 78 GCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.x...x::...:.:..:...x.:..:...x.::..:...:.::x..:..xx...................x..... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 20863494 NA +3422 chr4 + 190214555 29259283 29259282 29259362 80 TGTTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACACACATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x:..:.:.:::..x.:..:...x..::.....:..:x..:..xx.:.:...............x.....x.::x... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 20863492 NA +3006 chr4 + 190214555 29259285 29259284 29259377 93 TTCATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACA----CACACACACATATGTGGGGGAAAGAGA chr4 - 94230402 4453207 4453206 4453303 89777100 89777099 89777196 97 TTCTTCTTTATATGCTTACATGCATATTTTTGTAGGGATATATGTGCATGCACTCACACACACACAGAGGAACGTTCTCAAATTAAGAGGAAGAAGA ...x.x.x...:.::x..:..::....x.x...:x.x......:.:...:...x............----x..::x.x..x..xx:.:....::... 66M4I27M 62/93 66.7% 97/94230402 0.0% 4/93 4.3% 24806078 NA +3105 chr4 + 190214555 29259287 29259286 29259357 71 CATATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACAC chr4 - 94230402 10913776 10913775 10913845 83316558 83316557 83316627 70 CACATATCTGTCCAGATTCCT-TATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCAC ..:....x...x:.x..x:x.-.........:...:..:...x.....:.........:..x.x..:x... 21M1D49M 52/70 74.3% 70/94230402 0.0% 1/70 1.4% 18345511 NA +3666 chr4 + 190214555 29259287 29259286 29259364 78 CATATATATGTATATATATATATATGTATGTGTGTATATATA--TACATACACACACACACACACACACACACACATATG chr4 - 94230402 8395787 8395786 8395866 85834537 85834536 85834616 80 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ...:.:.:.:.:.:.::...x.:......x.:::...:...:--.....xx.:.................x.....x... 42M2I36M 57/78 73.1% 80/94230402 0.0% 2/78 2.6% 20863500 NA +3570 chr4 + 190214555 29259289 29259288 29259361 73 TATATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACACACAT chr4 - 94230402 8395793 8395792 8395865 85834538 85834537 85834610 73 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:...:...::...x.:..:...x..::.:.....::x..:.:xx.:.................x.....x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 20863496 NA +3078 chr4 + 190214555 29259292 29259291 29259367 76 ATATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACACACATATGTGG chr4 - 94230402 54293154 54293153 54293229 39937174 39937173 39937249 76 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATAG ..::::..x...:...............:.:xxx:...::.x.xxx::......x...::.......:....:.:. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -25033862 -69196540 +3156 chr4 + 190214555 29259293 29259292 29259360 68 TATGTATATATATATATATGTATGTGTGTATATATATACATACACA--CACACACACACACACACACACA chr4 - 94230402 14964814 14964813 14964883 79265520 79265519 79265589 70 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:..x.:.:.x....:.x..::....:::.::.:...::...:...--........::............ 46M2I22M 48/68 70.6% 70/94230402 0.0% 2/68 2.9% 14294479 NA +3030 chr4 + 190214555 29259294 29259293 29259373 80 ATGTATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACACACATATGTGGGGGAAA chr4 - 94230402 54293154 54293153 54293233 39937170 39937169 39937249 80 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATAGCAAA ...:.:..x...:.....:.:.:.......:xxx:..::..x.xxx::......x...::..........:.:x:.x... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% -25033860 -69196542 +3429 chr4 + 190214555 29259294 29259293 29259360 67 ATGTATATATATATATATGTA--TGTGTGTATATATATACATACACACACACACACACACACACACACA chr4 - 94230402 24136193 24136192 24136261 70094142 70094141 70094210 69 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA ....::........x....x.--...x.:....:...........x...x...x.......:.:x:... 21M2I46M 53/67 79.1% 69/94230402 0.0% 2/67 3.0% 5123101 NA +3125 chr4 + 190214555 29259297 29259296 29259365 69 TATATATATATATATGTATGTGTGTATATATATACATACACACACACACACACACACACACACATATGT chr4 - 94230402 4481679 4481678 4481747 89748656 89748655 89748724 69 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGT .:...:.:.x.x:..:..x......:...:.::...x...:.....:x....:..x.xx...:...... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 24777618 NA +3455 chr4 + 190214555 29264546 29264545 29264630 85 TATATATATATATATATATATATATATATATATATACACACACACACACA-CACATATATGTATCTATATATATATACACATACAT chr4 - 94230402 88147180 88147179 88147264 6083139 6083138 6083223 85 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACAC-TACAT ..:..:..x:x..............:.x.:.:...:.:............-..:.....x.x.xxx::......xx....-..... 50M1I29M1D5M 63/84 75.0% 85/94230402 0.0% 2/84 2.4% -58882634 -35347768 +3134 chr4 + 190214555 29264547 29264546 29264608 62 ATATATATATATATATATATATATATATATATATACACACACACACACACACATATATGTAT chr4 - 94230402 8395808 8395807 8395869 85834534 85834533 85834595 62 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT .:..:...x..:....:...::x..:..xx...:...............x...:.x...x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 20868739 NA +3339 chr4 + 190214555 29264561 29264560 29264684 124 ATATATATATATATATATATACACACACACACACACACATATATGTATCTATATATATATACACATACATATGTGTGTATATATATATATACACATACATATGTGTGTATATATATATATACAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAA------ATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:.::.:.:..x.::..::........::x::.:....:.:...:.x------..::......:..x..:......:.x.:.:x.::::.....::x..::...:x:..:x::.:.:x.:... 48M6D70M 68/118 57.6% 118/94230402 0.0% 6/118 5.1% -59751521 -34478881 +3336 chr4 + 190214555 29264567 29264566 29264632 66 ATATATATATATATACACACACACACACACACATATATGTATCTATATATATATACACATACATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..:.......:..............x.:x:.::.x:.:....:.xx.....::.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -37640280 -56590122 +3638 chr4 + 190214555 29264568 29264567 29264675 108 TATATATATATATACACACACACACACACACATATATGTATCTATATATATATACACATACATATGTGTGTATATATATATATACACATACATATGTGTGTATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x..:.....:.:.....x.x::...x:.x:...::....x::...::x:...:....x:..:.....x....:.x:...x.x::::::..:.... 108M 65/108 60.2% 108/94230402 0.0% 0/108 0.0% -43856534 -50373868 +3056 chr4 + 190214555 29264569 29264568 29264623 55 ATATATATATATACACACACACACACACACATATATGTATCTATATATATATACA chr4 - 94230402 66904847 66904846 66904901 27325502 27325501 27325556 55 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA ......:..::..........:.........:....x..xx.x:.x:.:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -37640278 -56590124 +3728 chr4 + 190214555 29279099 29279098 29279229 131 TTCTTTCCTTCTT--TCTCTTCCTTCC--TTCCTTCCTTCCTTCCTTCCTTC--------------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTTCTCTTTCC chr4 - 94230402 9693684 9693683 9693832 84536571 84536570 84536719 149 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCC ..:..x.......--.........:..--.:.....:x.::x..:...::.:--------------..xx:...x:.x.x.xx:.....:..:..::.:.::....:..::.:x...:.xx:...:x..x...:........:...... 13M2I12M2I23M14I83M 87/131 66.4% 149/94230402 0.0% 18/131 13.7% 19585415 NA +3064 chr4 + 190214555 29279151 29279150 29279233 83 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTTTCTCTTTCCATCT chr4 - 94230402 44322020 44322019 44322102 49908301 49908300 49908383 83 CTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTTACATTT .....:.:..xx:..xx::.::x.:..x.:.:x...x...x.:::....x.....x...........:..:.:....x...:. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -15042869 -79187533 +3447 chr4 + 190214555 29279209 29279208 29279303 95 TCTTTCTTTCTTTCTCTTTCCATCTTTCTTTCTTTCCTTCCTTTTTCTTTTTATTTGATCCATATTT--TCTTGTGAGTTTTTGAACTTCTTTAAGA chr4 - 94230402 89977909 89977908 89978005 4252398 4252397 4252494 97 TCTTTCTTTTTCTCTTTCTCCCTCTTCCTTTTCTCCTATTCTTATGCTGTGCACTTGGTTCTTGTTTTGTCTTGTCAAATTCCTAACTTTTATAGAA .........:.:...:.:...x....:....::.:.:x.:...x.x..x.x:.:...:.:.x.:...--......x.:x..::x.....:.x..::. 67M2I28M 63/95 66.3% 97/94230402 0.0% 2/95 2.1% -60698700 -33531702 +3005 chr4 + 190214555 29296782 29296781 29296860 79 GTAGTCTATATGCTGAGCTCCTTAATTAAGAAATAGTATCTTTTAATACTATTCAAAGTATATTTGAAGAACTATCTGA chr4 - 94230402 92953719 92953718 92953797 1276606 1276605 1276684 79 GTATTTCAGATGTGGAAAACCTAAATTATGACATAGTATCGCTTAATACTCGTAAAAGTAGATTTATGGTGCAATCTGA ...x.::.x...:x..:xx...x.....x..x........x:........xx.x......x....:x:.x:.x...... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% -63656937 -30573465 +3174 chr4 + 190214555 29311664 29311663 29311740 77 TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGAGAGTATATTCTTAGCTGCATTCCCAAAG chr4 - 94230402 89300929 89300928 89301003 4929400 4929399 4929474 75 TGTGTGATGGTGTGTTTGTGCGTGTGTGTGCATATGGGTGTTTTGAGTGGTTTCATTTCTTAGCT--ATTTTcagag ......xxx......x....:.........::.:..x.........:x:.xx.xxx.........--...::..:.. 65M2D10M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% -59989265 -34241137 +9639 chr4 + 190214555 29326503 29326502 29326828 326 TGGGCAAGGTACATCACAGGATAAGGTGCAAGAAAAATTTCAAGGAGAAATATTTATCTGCTATAGTCAAAAACATCTAAAAAGGAAAGCCATCTGGTATTAAGAAAAATTTCAGTCAAGAAATGGAGAAGAAAAAAAATGGTTTGATAACATTGAC---------ACTTATTCCAAATGCTAATTTCTCATGTCTTGCCAATTCAAAATCATATCTCTCTGA-AATAGTATTTGGTTTAACTGGCATCTGATATATGAAATAGACCATGTTCT---CACATCAGGGATTAATATGCATATATTTATTCAAGGTTCCAAACTAGAATGGCAGGACAATC chr4 - 94230402 19662082 19662081 19662410 74567993 74567992 74568321 329 TGGGCAGGAAAATTCATCATATAAGTTGTCTAAACAAATCCTGGGGGAATTAATGGTCTGCTCTATTCAAGAGCATCTAAAAAACAATGCCATCTGGTGTTAAGCAGAATTCTAGCCAAGAGCTGGC----AGCAAAATAGGTTTGACAACCTTGACATAAAAACTACTTATTCTCAGTGCCAATTATCCTCTCTCTGCCAGTTCAAAAGTGTATCTTCCCAAGAACAGGATTTAGCCC------CTCCTAGCATCTGAAACAAACCATGATCTTTATGCACCAGAGGATTAAGTAAAAATATTTAGGCAAAGCACCAAACAGAAATAAGAGAATAGTC ......:.:x.xx...:x:x.....x..:xx:..x..x.:.x:..:...x..x.x:......x..x....:.:..........:x..x..........:.....x.:....::..:.....:x...x----.:x....xx.......:...x.....---------........:x.:...:....x::.x:x:::.....:.......x::.....::.::.-..:..x....:.:::------.x:..:::..x.....:.:......x...---::..:...:.:x.x.x:.:x.x.......xx...:.:x......x::...::x..:.:.:.. 127M4D26M9I57M1I15M6D29M3I62M 208/316 65.8% 329/94230402 0.0% 23/316 7.3% 9664421 NA +9639 chr4 + 190214555 29326503 29326502 29326828 326 TGGGCAAGGTACATCACAGGATAAGGTGCAAGAAAAATTTCAAGGAGAAATATTTATCTGCTATAGTCAAAAACATCTAAAAAGGAAAGCCATCTGGTATTAAGAAAAATTTCAGTCAAGAAATGGAGAAGAAAAAAAATGGTTTGATAACATTGAC---------ACTTATTCCAAATGCTAATTTCTCATGTCTTGCCAATTCAAAATCATATCTCTCTGA-AATAGTATTTGGTTTAACTGGCATCTGATATATGAAATAGACCATGTTCT---CACATCAGGGATTAATATGCATATATTTATTCAAGGTTCCAAACTAGAATGGCAGGACAATC chr4 - 94230402 19661171 19661170 19661499 74568904 74568903 74569232 329 TGGGCAGGAAAATTCATCATATAAGTTGTCTAAACAAATCCTGGGGGAATTAATGGTCTGCTCTATTCAAGAGCATCTAAAAAACAATGCCATCTGGTGTTAAGCAGAATTCTAGCCAAGAGCTGGC----AGCAAAATAGGTTTGACAACCTTGACATAAAAACTACTTATTCTCAGTGCCAATTATCCTCTCTCTGCCAGTTCAAAAGTGTATCTTCCCAAGAACAGGATTTAGCCC------CTCCTAGCATCTGAAACAAACCATGATCTTTATGCACCAGAGGATTAAGTAAAAATATTTAGGCAAAGCACCAAACAGAAATAAGAGAATAGTC ......:.:x.xx...:x:x.....x..:xx:..x..x.:.x:..:...x..x.x:......x..x....:.:..........:x..x..........:.....x.:....::..:.....:x...x----.:x....xx.......:...x.....---------........:x.:...:....x::.x:x:::.....:.......x::.....::.::.-..:..x....:.:::------.x:..:::..x.....:.:......x...---::..:...:.:x.x.x:.:x.x.......xx...:.:x......x::...::x..:.:.:.. 127M4D26M9I57M1I15M6D29M3I62M 208/316 65.8% 329/94230402 0.0% 23/316 7.3% 9665332 NA +3089 chr4 + 190214555 29343046 29343045 29343122 77 CTGGGCGACAGAGCAAGACTCAGTCTCAAAAAATAAATAATAATAATAAAAGAAAAGAAAAAAAAAAGAAAGGAAAT chr4 - 94230402 70053527 70053526 70053603 24176800 24176799 24176876 77 CTGGACAGCAAAAATAAACTTGTCATTGAGAAAGAACTAAGAATAATAAATGAATAGTAAAAAAAAAAAAATGAAGT ....:.::..:.:xx.:...::x:x.::.:...x..x...x.........x...x..x.........:...x...:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -40710481 -53519921 +3048 chr4 + 190214555 29349565 29349564 29349614 50 TTCCGCCTCAAAAACAAACAAACAAACAAACAGAAACAAACAAAAATAAA chr4 - 94230402 59568833 59568832 59568882 34661521 34661520 34661570 50 TTCTCCTCCAAAAGTAAAAAAACAAACAAACACAAACAAACAAAACCAAA ...:x.::.....::...x.............x............x:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -30219268 -64011134 +3012 chr4 + 190214555 29352885 29352884 29352936 52 CCTGGTACTAGTGGAAAAACAAACAAACAAACAAAA-------AAACAGGCACAGAGGA chr4 - 94230402 13831883 13831882 13831941 80398462 80398461 80398520 59 CCTGGTACTACCTGAAAAACAAACAAACAAACAAAAAACCTCTAAATGGACAAAAAGGA ..........x:x.......................-------...::.:..x.:.... 36M7I16M 44/52 84.6% 59/94230402 0.0% 7/52 13.5% 15521002 NA +3015 chr4 + 190214555 29363608 29363607 29363674 67 TGCAAGAGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGTGGAGGGTAGAG chr4 - 94230402 89137523 89137522 89137589 5092814 5092813 5092880 67 TGCAGGAAGGGCGTGTGGGCACCTGTGTGTGTGTGTGTGTGTTCCCATCCAAAAGCAGAGGTTAGAG ....:..::..:.....x.:::x...................x:x::.x:::x..::....x..... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -59773915 -34456487 +3027 chr4 + 190214555 29370806 29370805 29370864 59 CCTAGAAATTTTTTTTTTCACTCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTT chr4 - 94230402 23722417 23722416 23722475 70507928 70507927 70507986 59 CCAAGAAAGCTTCTCTCAGACTTCTTCCTTTTTTTTTTTTTTTTCCCCTTACTGTTTTT ..x.....x:..:.:.:xx...::....................::::..x:....... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 5648389 NA +9015 chr4 + 190214555 29396063 29396062 29396232 170 TAATTACACATTTATTTAACCAATTAAGCATGAAAGTGGCATTATTGTCAAAGGTATGATGTATGACCTGAACATAATTTGGTTAATGAGGAACAAGAAATGCCTGCTAAGTAGGGCAGGTATTCTGTTAGCAGAGACTGCTAATTGCCTCTGACATATGTCAGATTGAA chr4 - 94230402 19678252 19678251 19678419 74551984 74551983 74552151 168 TAATTACACGTTGATTTAAACAATTAAGCATGAAAATGCCTTTATTGTCAGAGATGTGGCATATGACCTGAAAGTCATTTGGCTAATGATAAACAGAAAGTTCTTGTCAACTGGGGCAGGTATTTTGTTGGCAGA-ATTACTAATTACC-CTGACAAGTTTCTAAATGAA .........:..x......x...............:..x.x.........:..:.:..:::...........x:.x......:......x:....::..:.x.:..::..x.:...........:....:.....-.:.:......:..-......x:.x..x:.x.... 135M1D13M1D20M 130/168 77.4% 168/94230402 0.0% 2/168 1.2% 9717811 NA +3064 chr4 + 190214555 29408076 29408075 29408112 37 TTTACAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAA chr4 - 94230402 76845954 76845953 76845990 17384413 17384412 17384449 37 TCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA .:.............................:...:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -47437878 -46792524 +3154 chr4 + 190214555 29417946 29417945 29418037 92 TGAATATATTCAGAT-----TTTTTTAAATTATAGATTACAA---------TTTTATAATTTTTTTTTCCTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 88358255 88358254 88358359 5872044 5872043 5872148 105 TGAATATATGGAGACAGAACTTTCCAAAATGAAAAAGGATAAAACATTGATTTTTATA-TATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCTGGAG .........xx...:-----...::x....x.x.:.xx.:..---------.......-.x........xx::......:.:..................:.x... 15M5I22M9I7M1D47M 70/91 76.9% 105/94230402 0.0% 15/91 16.5% -58940309 -35290093 +3198 chr4 + 190214555 29426115 29426114 29426204 90 TCCTCCTCCCTCTTCCTCTCTCCCTCTTTCTCTCCTTTTCTTTCTTGATTCTTTCCTTCCTTGTTTTCTTTTTTCCTTTTTACTTATCTT chr4 - 94230402 17785247 17785246 17785336 76445067 76445066 76445156 90 TCCCCCTCAGTCTTAACCTTATCTTCTTTGTCCTTGTCTCTCCCATTATTCTTCCCTTCTTTGTTTACTTGCTCTTACTTTTCTTGTCCT ...:....xx....xx:..:x:.:.....x..:::x.:...::.x.x......:.....:......x...x:.:::x:...x...:..:. 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 11640868 NA +3056 chr4 + 190214555 29449948 29449947 29449996 49 AAAAAAAAGGAAGAAAAGGAAAGAGGAGGGGAAGGAAGGAAGGAAGGGA chr4 - 94230402 47169728 47169727 47169776 47060627 47060626 47060675 49 AAAAATGAGGAAAAGAGGAGAGGAGGAGGGAGAGGGAAGAAGGAAGGGA .....x:.....:.:.:.::.:........::...:.:........... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% -17719780 -76510622 +3007 chr4 + 190214555 29457985 29457984 29458078 94 GTCTTGTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTT chr4 - 94230402 8439366 8439365 8439459 85790944 85790943 85791037 94 GCCATCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCT .:.x.x....xxx.....:..:x.x..::x....::....x:::.::..:::::..:.......:...:..:......:xx...xx:.....:. 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 21018619 NA +3497 chr4 + 190214555 29458010 29458009 29458159 150 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCT chr4 - 94230402 60352828 60352827 60352977 33877426 33877425 33877575 150 TTCCTTTCTGGATTTTTTCCATTTCTCCCTCCTGCCTTTGCACTGTTTGTCTTCTTCCTTGGTATTTTTGTTATTTATGTTGTTATCAATATTTCCTAATTCATTTTCTTCTGTTAGTTTCAATTGTTATTCCTTTTTTTTTTTTTTACT ..:......xxx...:..:.x..::.:.:.:..x:....x:x::x...x::.....:...xx:x.:...x..x..:x.x..x..x::xx:x....:.xx..:x...:.....x..xx....xx..x:.x...:.....:...:...:x.. 150M 89/150 59.3% 150/94230402 0.0% 0/150 0.0% -30894818 -63335584 +3494 chr4 + 190214555 29458046 29458045 29458160 115 TTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTC chr4 - 94230402 28866445 28866444 28866559 65363844 65363843 65363958 115 TTCTGTTCTGTTGGCTGCTTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACCTTGATGTTTTTC ..::x....x..xx:.x...:..x..x..:....x.:.::.::.:xx...:..::.x.x....:.::.......x.........xx:x.:...:.....:x:...xx.x.:.:.. 115M 71/115 61.7% 115/94230402 0.0% 0/115 0.0% 591601 NA +4659 chr4 + 190214555 29458050 29458049 29458209 160 TTTCTTTTTCTTTCTTTCTTTCCTTCTTTCT--------TTTTCTTTTTCTTTCTTTCTTTTCTTTCTTT-----CTTTCCTTCTTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCT-----TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTT chr4 - 94230402 45185576 45185575 45185750 49044653 49044652 49044827 175 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCT---TCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ...x.x:..x..x..:x:.....:....:..--------......x:...x................x..-----.:..:.......:.:.xx.....:.:.....:x:..xx.x..---....x..x::.x.......-----::.:.xx...:.:x......::.::..xx..... 31M8I31M5I42M3D19M5I34M 110/157 70.1% 175/94230402 0.0% 21/157 13.4% -15727526 -78502876 +3448 chr4 + 190214555 29458054 29458053 29458136 83 TTTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTT----TCTTTCCTT-----CTTTTTCTTTCTCTTTC chr4 - 94230402 35294590 35294589 35294681 58935722 58935721 58935813 92 TTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC ..::.....:.::...x.x..x......:...:...x.......x:...:...:..:----.:.......-----..x...::.....x... 57M4I9M5I17M 62/83 74.7% 92/94230402 0.0% 9/83 10.8% -5836536 -88393866 +3125 chr4 + 190214555 29458068 29458067 29458133 66 TTTCCTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTTCTCT chr4 - 94230402 19711335 19711334 19711400 74519003 74519002 74519068 66 TTTAGTTCTTTTTGTTGTTTACTGTTACTTTATTTTTTATCTTTCTTTCTTCCTTTTTCCTACTCT ...xx......:.x..x:..x:.x..x....x....:.x..........:.:.......:.x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 9746733 NA +3352 chr4 + 190214555 29458079 29458078 29458224 146 CTTTTTCTTTTTCTTTCTT--------TCTTTTCTTTCTTTCTTTCCTTCTTTTTCTTT--CTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCT----CTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTT chr4 - 94230402 51102218 51102217 51102377 43128026 43128025 43128185 160 CTTTTTTTCTGtatttattataataaatattatCAATTTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTTTTTATCTATTCATATCTGTTTTCTTT ......:.:.x.x...x..--------.x..x..xx.:..::..x:.....:..:.x.:--.:.x....xx.:x...:.:....:.x......:.----x.::..x....:.::.:..::..:..::x.x:....:.x...x..:x.x.:.x........ 19M8I32M2I34M4I61M 93/146 63.7% 160/94230402 0.0% 14/146 9.6% -21644139 -72586263 +3984 chr4 + 190214555 29458099 29458098 29458301 203 CTTTTCTTTCTTTCTTTCCTTCTTTTTCTT--TCTCTTTCTTTTCT---TTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCATCTTTCCTTC--------------ATTCCTTC---CTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTA chr4 - 94230402 85832816 85832815 85833035 8397368 8397367 8397587 220 CTCTTTTACCCTTCTACTCCCCTTTTTCCTGGCTTCTTTCTGCCCCACATCTTTTGTGCTTTATTTTTTCCTCTTGCTCT-----TGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCTCTCACTTCCTTCTGGCTCTATCTAAAAGATGTGCTTCTCCTGAGTAGGAGTATTTCTGCAAATTAGTTTCCTGCTGTTCATTTTTCTTTTGTCTTCTTTCCCTTA ..:..:.x:.:....x::.::.......:.--::.......x::.:---.:...:x.x....x.:.:.::.....x..:.-----.x....x...x.:...::::x....x..:......:..x:...:....xx..:.x:..xxx.xx.x.x....--------------...:..x.---:.xx....:.x..x...x..:..::...x.:..:...:::... 30M2I14M3I31M5D72M14I8M3I43M 125/198 63.1% 220/94230402 0.0% 27/198 13.6% -56374717 -37855685 +4149 chr4 + 190214555 29458121 29458120 29458278 158 TTTTTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTC---TCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCT-------------TTCTTTCCCTTCCATCTTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTT chr4 - 94230402 45185577 45185576 45185750 49044653 49044652 49044826 174 TTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x.x...x:.x:.:x.....::.:...:.xx.:..---.:...x::..x..........::..::x...:.:x.:..::........:.xx.....:.:.....:x..-------------.x...x:.:...:.x.:x:..:.x..::...x:.::.....:.:.xx..... 36M3I70M13I52M 99/158 62.7% 174/94230402 0.0% 16/158 10.1% -15727456 -78502946 +3047 chr4 + 190214555 29458124 29458123 29458240 117 TTCTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCA chr4 - 94230402 81583171 81583170 81583287 12647116 12647115 12647232 117 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTTTCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTTCCA ....:.:.:...:.....:::.:x.xx:...x::..x.:.::.:x.:...x...::.:..:.xx:..::.::.x..xx..:..::...::::.::::...x.x...x..x....... 117M 65/117 55.6% 117/94230402 0.0% 0/117 0.0% -52125047 -42105355 +3123 chr4 + 190214555 29458126 29458125 29458213 88 CTTTCTCTTTCTTTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCT chr4 - 94230402 18988809 18988808 18988896 75241507 75241506 75241594 88 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...:x.:x.:.:..x:x....x......:.xx::..x.:.:..........:....:.......x...x.xx...:.x:.:::.x... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 10469317 NA +3435 chr4 + 190214555 29458138 29458137 29458217 80 TTTCTTTTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .::...x.x.:..x........xx::..x...:..........:..:.........x...x.xx...::x..::..x... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 10469321 NA +3075 chr4 + 190214555 29458148 29458147 29458231 84 CTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTT chr4 - 94230402 18988809 18988808 18988892 75241511 75241510 75241594 84 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT ...:x..x::.::.x.x.:..x......:.xx.:..x...:..........:....:.......x.:.x.xx.:::.x....:. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 10469339 NA +3712 chr4 + 190214555 29458150 29458149 29458295 146 TTCTTTCTCTCTCTCTCTTTCTTTC------TTTCTTTCTCTTTCTTTCTTTCTTTCT----TTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCATCTTTCCTTCATTCCTTCCT----------TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTT chr4 - 94230402 18235168 18235167 18235333 75995070 75995069 75995235 166 TTCTTTCTGTTTTTCTCCTTTTCTTAACAAGTTGTATTCTCTTCATTGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTCTAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTT ........x.:.:....:..:.:.:------..x:x.......:x..x.:.x..x.:.----..:.:...x.:x..x.....x.xx..x...::..:.:xx.x...:::.x:...:...x.----------.......::...:.x.......x...::.:..:.. 25M6I27M4I59M10I35M 96/146 65.8% 166/94230402 0.0% 20/146 13.7% 11222982 NA +3684 chr4 + 190214555 29458180 29458179 29458304 125 TTCTCTTT--CTTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTTCTTTCTTTCTTTCCCTTCCATCTTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAAT chr4 - 94230402 65908687 65908686 65908813 28321590 28321589 28321716 127 TTCTCTTTGGCTTTCTTTCCTATTTCTTCTGTCTCATTCTAGTCTGGATATATTTTTATTTCATCCTTCAATCTTTTCTAACTTCTTCCCTCTTTACCTATCTTCAGTTCTCATGCCTTATGTACAT ........--.........:.x:..::...x....x....xx...xxx.x.x...::x..:....:...xx..x..:..xx......:.:.::..x:..x....:xx....:x.x::..x.x..x.. 8M2I117M 82/125 65.6% 127/94230402 0.0% 2/125 1.6% -36450507 -57779895 +3069 chr4 + 190214555 29458243 29458242 29458303 61 TTTCCTTCATTCCTTCCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAA chr4 - 94230402 50092557 50092556 50092617 44137786 44137785 44137846 61 TTTATTTCATTCTTTGTTGCTCAGGGTTTTTTGTTTCTTTCTCTCTCTTTTTTTTTTTAAA ...x:.......:..x:.x..:xxxx.:....x.........:...:.............. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -20634314 -73596088 +3118 chr4 + 190214555 29478552 29478551 29478627 76 GGGAGGGAAGGGGAGGGGAGGAAGAAAGGGAAATAATGGGAAAGAAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 16117436 16117435 16117511 78112892 78112891 78112967 76 GGGAAGGAGTAGTAGTAGGATGGGAAAGAAAACTATTAGCAAAGGAAAGGAAGGAGGGAAAGGAAGAAAAATGAAA ....:...:x:.x..x:.::x::.....::..x..x.:.x....:..........:....:.:.:...::.x.:.. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 13361116 NA +3194 chr4 + 190214555 29492272 29492271 29492342 71 TTAAATGTTCTTCGTTACCA--GGTTT-----ATGGTTTTTGTTTGTTTGGTTGGTTTTTGTTTGTTTTGTTTTGTTT chr4 - 94230402 84132177 84132176 84132254 10098149 10098148 10098226 78 TTAAGGTTTGTTTGTTTCCACAGGTTTCAGTTGTAGGTTTTGTTTGTGTGGTTGTTGTCTGTTTGTTCTGTTTTGTTT ....:xx..x..:...x...--.....-----:.:.x..........x......x.x.:........:.......... 20M2I5M5I46M 57/71 80.3% 78/94230402 0.0% 7/71 9.9% -54639905 -39590497 +3182 chr4 + 190214555 29492293 29492292 29492364 72 GTTTATGGTTTTTGTTTGTTTGGTTGGTTTTTGTTTGTTTTGTTTTGTTTTGTTTTCT----CAGCACTTTGAACA chr4 - 94230402 40961752 40961751 40961826 53268577 53268576 53268651 75 GTTTGTTTGTTTTAATTGTTTGGTTGGTTTTGGGTTGTTTGGTTCGGGTTTGTTTTTTAAAATAGCA-TTTGAACA ....:.xxx....:x................x.x......x...:x.x........:.----:....-........ 58M4I5M1D8M 57/71 80.3% 75/94230402 0.0% 5/71 7.0% -11469459 -82760943 +3567 chr4 + 190214555 29495469 29495468 29495560 92 ACATATGCTTTTTTGGCTATTTAAAATTTCTATATTTTGTATATATGTAATTTATACAACCAAAAGATGGCAGTACTTCATCAACTATTCTT chr4 - 94230402 19707065 19707064 19707156 74523247 74523246 74523338 92 ACCTATGTCTTTATTTCTGTGACAATTATATCCATCTTCCATATTCAGTATTTGTGCAACCAAAAGATGGCAGTGCTTCATCAACAATTTCT ..x....::...x.xx..:.xxx..x.x.x.x:..:..x:....x::xx....:.:..................:..........x...::. 92M 63/92 68.5% 92/94230402 0.0% 0/92 0.0% 9788404 NA +3870 chr4 + 190214555 29508480 29508479 29508581 102 AAGACAAAATCTGGTATTCATGTGGAAGGAATGGAGTCAATAATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964786 14964785 14964884 79265519 79265518 79265617 99 AAGGCAAAGT---GCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:....:.---.:...:..:.:..:.x:x..x:.x..xx.....:.x.:::.:.::.:.::.:...:......:.xx........::............. 10M3D89M 66/99 66.7% 99/94230402 0.0% 3/99 3.0% 14543694 NA +3093 chr4 + 190214555 29508511 29508510 29508579 69 TGGAGTCAATAATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964816 14964815 14964884 79265519 79265518 79265587 69 TGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....xx...xx..:.x.:::.:.::.:.::.:...:......:.xx........::............. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 14543695 NA +3138 chr4 + 190214555 29508521 29508520 29508576 56 AATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395807 8395806 8395862 85834541 85834540 85834596 56 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:..:...x..:....:...::x..:..xx...:...............x..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 21112714 NA +3256 chr4 + 190214555 29508522 29508521 29508601 80 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATGTGTATATATACACAC chr4 - 94230402 88147181 88147180 88147259 6083144 6083143 6083222 79 ACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATAGGGAGAAGCATATATCAACAC .:..:..x:x..............:.x.:.:...:.:.............-..:.:.:.x:x.x:x.:......xx.... 50M1D29M 56/79 70.9% 79/94230402 0.0% 1/79 1.3% -58638659 -35591743 +3031 chr4 + 190214555 29508522 29508521 29508584 63 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 14964821 14964820 14964883 79265520 79265519 79265582 63 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.x....:.x.:::.:.::.:.::.:...:....:...xx........::............ 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 14543701 NA +3206 chr4 + 190214555 29508522 29508521 29508580 59 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx.:.................x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 21112718 NA +3309 chr4 + 190214555 29508523 29508522 29508592 70 TATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATGTGTATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...x.:..:...x..:....:...::x..:.:xx.:.................x.....x:..x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 21112722 NA +3178 chr4 + 190214555 29508524 29508523 29508578 55 ATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x..:....:...::x..:..xx...................x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 21112716 NA +3225 chr4 + 190214555 29508524 29508523 29508583 60 ATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.x.:::.:.::.:.::.:...:........xx........::............. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 14543699 NA +3411 chr4 + 190214555 29508524 29508523 29508590 67 ATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATGTGTA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x.:..:...x..:....:...::x..:..xx.:.................x.....x...x:.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 21112720 NA +3087 chr4 + 190214555 29508544 29508543 29508611 68 ATATATATATATACACACACACACACACACACACACACACATGTGTATATATACACACATATATATCT chr4 - 94230402 66904847 66904846 66904914 27325489 27325488 27325556 68 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTT ......:..::..........:...........:.:x:.x:.x::x:.:......xx....:::..:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -37396303 -56834099 +3361 chr4 + 190214555 29508548 29508547 29508602 55 ATATATATACACACACACACACACACACACACACACATGTGTATATATACACACA chr4 - 94230402 38535895 38535894 38535949 55694454 55694453 55694508 55 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA .......:....::...::x:x.:.....:..............:...:..:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -9027347 -85203055 +3044 chr4 + 190214555 29508561 29508560 29508611 51 CACACACACACACACACACACACATGTGTATATATACACACATATATATCT chr4 - 94230402 87372747 87372746 87372797 6857606 6857605 6857656 51 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT ..x...........x..........x.:..::...::..::......x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -57864186 -36366216 +3047 chr4 + 190214555 29510993 29510992 29511039 47 CCATATTTTAAGCAAAAAAAAAAAAAAAAAAAAAACAAAAAGCAACA chr4 - 94230402 29269105 29269104 29269151 64961252 64961251 64961298 47 CTATGCTTCAGCCAAAAAAAAAAAAAAAAAAGCAACAAAAAACAACA .:..::..:.:x...................:x........:..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 241888 NA +9314 chr4 + 190214555 29535726 29535725 29535934 209 AAATAGATTCTTAAATCACAAATCTCTTAGCCCTGCATCTCCCAATAAAAATGATTTTTCTATTTCTTATTGTTAATCTTTCAACCTACTGTTCAAAACAAAAATTATTCTTTCATCTTGGCATGAATCTGTCAAAGGCACTGCTTCCAACAAAATTGACTTCTCTAATTTATGTTTCTTTCCCTGAATCTCTCAAGCCCGTGTTCTCA chr4 - 94230402 19716358 19716357 19716564 74513839 74513838 74514045 207 AAAGGGATTCTTGAATTGCAAATCTCTAATACTAGTAACACCCAATAAAACTGGTTTC-CAATTTCTTATAATGAATCTTTCAATACTTTGTTACTAATAACGATTATTTCTCCATCTTGCCATGAATCTGTCAAAAGCATCACTGCCAATAAAACTGACATGCCTAATATACATTTC-TTCCCAAAATCTTTTAGGCCTCTCTTCTCA ...x:.......:...::.........x.xx.:x.:.x.x..........x..:...:-.x.........x:.x..........:x:x:....xxx..:..x:......::.:.......x...............:...:::..x....:....:....x.x:.....x..::....-.....x:.....:.:.:...:x.x...... 58M1D119M1D30M 151/207 72.9% 207/94230402 0.0% 2/207 1.0% 9819368 NA +15144 chr4 + 190214555 29549671 29549670 29550159 489 TTTCTCTATTGTGTCA-TAAAATTTTCAAAAGCTTCAGGGCTTGAACAGTAAATATATTGTTTTCCTTACTGACTAGCTTGATGGAGATTTTGACAAATGTATGCTGGTTTTGAAAGAACTTGTGGGGTCCTGCTTATCACCGTGTCCATTATTGGTTTGATTTC-ATTATATATAGTTAGGGCAAAATAATTTGTATCCCACTTAAGAAGCTCCTGAAAACAAACACATGAAAAAGAGTACAAATTCTGTATTATATATCTCAAAAT-GGAAAATAATTTGTTTAAATGAAATCAAGCCAATATCACTAACTGATC-CATCTTTACCCCCTAAAGCTGCATGAAATGACTGCTATGCATGTATATAATCATTAAAATGTGTTGACAGAAATTTAGTTGTTATCCATGGATATTGTCAAGAACTATTCAAAATAGAAATCAAAATCAAATCCGCTAGACATAGTTTTATATGTTATAATA--TTATAATTTTGCA chr4 - 94230402 19731649 19731648 19732133 74498270 74498269 74498754 485 TTTCTGTGTTCTTCTACTAAGGGTTTATGATGCCTGTGGGCTTCAGTGTTAAGCATATTGCTTTGCTCAGTGAATAG--TGGCACAGATTTCTACAACCACAT--TTGTTTCCAAAGCACTTGTAGAACATGTATAATCACCTTGTCCTTTATAACATTGATTTTTAATATATATGGTTAGCCTAGGATATTTTATAACCCAAATGAAAAGCTCCTGGAACTAAATA--TCACAAAGAAGTTGAAGCATATAGTTTATGTACCAGAATTAGAAAATCATTTGTTTAAATAAAGTCAAGCTAAGCACAGTAATTGATGGCTTCCTTACCCCCTGAAGTTCCATGAAATGACTG---TGCCTTTATATAGTAATTAAAATGTGCCAACAACTATTTTATTGTCTCCAATGGA-ATCGTCAAGCACTGTTCCAAATACAAATCAGAGGAAAAGCTGCTAAACATGGTATTATCTGGCACTGTAATTTATAGTTATGTA .....x.:..x.x::.-...::x...xx:.x..:.xx......x.:::x...::......:...x..:.x...x...--..:::x......:x....x:::..--.x....:x....x......:.:::x:xxx.x......x.....x....x:xx.......:-.x.......:.....xx:.::...x...:..x....xx.:.:.........:..x:...:.--.x.x.....:xx::..x:x.:..x.x...:.x:..:...-:......x............:..:......:..xxx..x...:....x-.x..:.........:...:.x.............---...x.x......:.x...........:::...:xx....x:....:x:.x.....-..:......x...:...x.....x......:.:xx...x.:....:....:..x....x..x:.:x:..--.....:..x..:. 16M1I60M2D24M2D60M1I61M2D39M1I48M1I34M3D55M1D69M2I13M 330/479 68.9% 485/94230402 0.0% 16/479 3.3% 9818022 NA +5828 chr4 + 190214555 29589378 29589377 29589640 263 TACAGCTGCTACTTAGAACT-GTCTTCAAATAGTAGACTACTTGATTGCTGCTGCCAATTGGATTTTCTTAACTATTATTTCCCTTTAGTCAAAGACACAGAATGTAGAAACTCTGTATCTAAGGGATTTG----GCAGAGGCTTAGCTATTTATCATTTGTGTGAGGATCAAGCAGGCCAGGTGTGGTGTCCTGTTTATTTTAATGATACCAATATTGGGATGTGAGTTTAGAATAATAATATAGAATATTATTCACTTATTTTGCA chr4 - 94230402 19757466 19757465 19757725 74472678 74472677 74472937 260 TACTGCTGAAATT--GAACTAGTTCCCACATGACAGACAAGTTAACTACTTTTGCCAGCTGGGTTTGCTTAATGCTCATGCTTTCTTAGGCAAAGGCACAAAGCATTGAAAGTCTGTTACCAAAGTAATAGTCGAGCAGGAGTTTTGCAGATTATAATATATGCAAAAAGCTAGCAGACCAATTGCA-----TTCTTAATAATAATGAAACTGATACTGCAGAGTGAATTTAGGATGGCAG-ATTCAGTGCTGTTTTTTGATTTTTCA ...x....xx.:.--.....-..:::..x..:::....x.x..:.:.:..x:.....::...:...x.....:xx.:..x:::::....x.....:....:.:::.x....x.....xx.:..:.x.x.x.----....::.:..x..x:x....x..x.:..::.::.x.x.....:...:x..::-----:.x..x..xx......x..::...:..x::x....:.....:..:::.:-..xx.:.::.:..:x:.x.....x.. 13M2D5M1I110M4I52M5D49M1D26M 157/255 61.6% 260/94230402 0.0% 13/255 5.1% 9831912 NA +3268 chr4 + 190214555 29626077 29626076 29626179 103 ATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATTCAGAGTTAC---TCCTATCATGAAATTTGGGTTTCATTTTGTTGTG chr4 - 94230402 81411827 81411826 81411930 12818473 12818472 12818576 104 ATCTCAAAAATAAGCAAAAAGAGGAAAGAAATTGAAAAAGAAAA--AGAGAGAGAGAATTTATTTTTATATATCCTGGATTGCAATTTAGGGTCAAACTTACTATG ...x......x..:x.....:.::...:...xx:.....:....--..............:.xxx...:---....:xxx..x.....:..x.:x.x:..::.:.. 44M2D23M3I34M 70/101 69.3% 104/94230402 0.0% 5/101 5.0% -51785750 -42444652 +3120 chr4 + 190214555 29626080 29626079 29626145 66 ACAAAAAAAAAAAAAAAAAAAAAAAA---------AAAAAAAAAAAAAAAAGAGAGAGAGAGAATTCAGAGTTAC chr4 - 94230402 78791788 78791787 78791862 15438541 15438540 15438615 75 ACAAACATTAAACAAAACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAATCAC .....x.xx...x....x....x...---------...::........................x.x.:.:.:.. 26M9I40M 53/66 80.3% 75/94230402 0.0% 9/66 13.6% -49165708 -45064694 +3112 chr4 + 190214555 29626087 29626086 29626141 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATTCAGAG chr4 - 94230402 42895012 42895011 42895066 51335337 51335336 51335391 55 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAG ...:.::...:..::.........:......x.........:x.....:.xx... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -13268925 -80961477 +3059 chr4 + 190214555 29630242 29630241 29630280 39 AATATATATATATACATATGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 53251980 53251979 53252018 40978385 40978384 40978423 39 AGCATAAATATATACATATGTGTGTGTGTGTGTGTGCAT .::...x.............................:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -23621738 -70608664 +3051 chr4 + 190214555 29642630 29642629 29642672 43 TTTTTTGTTTTTGTTTTTTTTTTGTTTTTTGTTTTTTGTTTTT chr4 - 94230402 60157773 60157772 60157815 34072588 34072587 34072630 43 TTTTTTGTTGCTGCTTTTTGTTTATTTTTTGTTTCTTGTTTTT .........x:..:.....x...:..........:........ 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -30515143 -63715259 +3103 chr4 + 190214555 29661241 29661240 29661295 55 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATGTGTAT chr4 - 94230402 86961498 86961497 86961552 7268851 7268850 7268905 55 aAACAAACAAAAAAAAAATATATATATACATATAACAGTAGAAATATATGTTTAT ...x...x....................:.....xxx:..x.x........x... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -57300257 -36930145 +3056 chr4 + 190214555 29661241 29661240 29661291 51 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATGT chr4 - 94230402 69437739 69437738 69437788 24792615 24792614 24792664 50 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGT .........x........:x...................x.-..:...x.. 41M1D9M 44/50 88.0% 50/94230402 0.0% 1/50 2.0% -39776498 -54453904 +3076 chr4 + 190214555 29662301 29662300 29662343 43 TGAAAAAACAAACAAACAACAACAACAACAACTACAAAAAAAA chr4 - 94230402 75929104 75929103 75929146 18301257 18301256 18301299 43 TGGAGAAACAAACAAACAACAACAACAACAAACAGAAAAAAGA ..:.:..........................x:.x......:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% -46266803 -47963599 +3095 chr4 + 190214555 29693160 29693159 29693229 70 AAAAAAAAAAAAAAAATTGTGTTTTTGTTGTTGTTGTTGTTGTTTGTTTTGTTTTGTTTTGTTCTGTTTT chr4 - 94230402 54317725 54317724 54317794 39912609 39912608 39912678 70 AAAGAGAGGTGAATGATGTTGTCTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGCCCTATATTCTTTT ...:.:.::x:..x:..xx...:...x......................xx.....:::.:.x:.x.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -24624565 -69605837 +3008 chr4 + 190214555 29693162 29693161 29693221 60 AAAAAAAAAAAAAATTGTGTTTTTGTTGTTGTTGTTGTTGTTTGTTTTGTTTTGTTTTGT chr4 - 94230402 3201922 3201921 3201981 91028422 91028421 91028481 60 AAAAGGAAGCCAGACTGTGTCCTTTGCTTTGTTGTTGTTGTTTGTTTGTTTTTGTCTTGT ....::..:xx.:.:.....::..xx:x...................xx......:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 26491240 NA +3007 chr4 + 190214555 29713489 29713488 29713586 98 TTTTAGATTTTGTCCTTGATGTGGGAATATATATATATGTATAAGTATATATATATATATGTATAAGTATGTGTATGTATATATGTGTATGTGTGTGT chr4 - 94230402 4406377 4406376 4406474 89823929 89823928 89824026 98 TTTTATTTTTTCTCATGGGGATTGAGGTAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGT .....xx....x..x.x.:x:.x.:::..x.x::....:xx.x..x...::........xx.......:.....:...:.:.:.:.x:..:.:.:x.. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 25307112 NA +3043 chr4 + 190214555 29713534 29713533 29713583 50 TATATATATATATATGTATAAGTATGTGTATGTATATATGTGTATGTGTG chr4 - 94230402 19704277 19704276 19704326 74526077 74526076 74526126 50 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x...:.......:.....x:.x.........x:..:.....:...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 10009257 NA +3586 chr4 + 190214555 29713675 29713674 29713799 125 ACATTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATACACACACACACAATGAACAA------------GGGAAAACAGGAGAA-------AAAGTTGTTTCAAAGCCATTATTTGAAATGTT chr4 - 94230402 37363036 37363035 37363179 56867224 56867223 56867367 144 ACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATATTAAGCTGGAATAACCAGAAGCAGGCACTGAATGTTATTTTGAAACAATCCTGTAGAACATT .........:::.::x........:..::.:.x......xx:.:.....:.:...:..:x........xx...x.:..------------.::x..x...:..x.-------..x...:...::..:.x..:x.x.::..::.. 78M12I15M7I32M 82/125 65.6% 144/94230402 0.0% 19/125 15.2% -7649361 -86581041 +3318 chr4 + 190214555 29718092 29718091 29718165 74 GATTGTTTTAGAGAAGAAGAAAGTCAATAAAAAGATAACCACCGTAGCAAACCACAATGCTGCCTTTTCAAACA chr4 - 94230402 78934024 78934023 78934097 15296306 15296305 15296379 74 GATTATTTTAAATAAAAACAAGGGGAGAAAAAAAAAAAAAACAGTAGAAAATCACTACACTACCTTTTCAAACA ....:.....:.x..:..x..:.xx.:x.....:.x..xx..x....x...:...x.::..:............ 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -49215932 -45014470 +28977 chr4 + 190214555 29734808 29734807 29735735 928 ACAATATTTTTATGTCAAGGCACAACTTGAAGTCACATTCCCTGACAAGTGTCCTGCTACATGTATTA--------------CTAAGCATGTGTGGACAACTTCTGA--GGCCTAGCATACTTAATATGGGTAGGTTCTTGACAGAGCACATGAGACTTAATTCAT-TTCTGGAGTGCTCCGTTACCGACTCTGACAGCCTTACAGCTCTGTTGGGAAATGAAGTATAACATGAGGTTACTAAGCAACTCTGCAGCTTTTTAAAAGCATGTCTTGGAACTCAGTTGTTTCTCCTAATTGATTCCGTCCATATCAGTTTGAACATAAATGGGACATCATGTTTAGAAATATGCTGGATTGGTACTTTAAGCTAA--TGTCTTGCTACCTCTGCATATCTAAATCAAGGGCTGGCATATAAATGTCATATTGAAAGCAAATTTTTATCTTTCTCCTGAGTTGCATCATACACACACACACACACACACACACACACACACACACACACACCTATTTCTGCACCCCAAGCTAGGGTCTGAGTTTATCTGCACATTGTCAGAAAATAACAGAAAAAACTGAAGAGTGATGTTACTTTTTTTTAAACTTGTACACAGAATAAAATTTTAATTAGCCCATCTGACTTACC-CCTCAATACATTCCCACAGTATAATACATTAGAATTAATAGCAAATCTGTCTCACAGCATTGTAGCCACATTGACAT-TTCTGTAGTCAGTAAACCAATGAGCAAGATAATATGTCATCCAATCTTGAAATATTAGTGATAAATGCATCCACATACTGCATTTTACGAGGAGCAAAGTAGACTTTTATCAACCTTGAC--TCCTCTCCATTATATCAGAGGTGAAGAGTAAACAACAAAATGTTACAAACTTTTTATATTCAATG-TGTTTTCTTAAG--AACCCATTTGCTCTTCACTCTACATTTTT chr4 - 94230402 19798451 19798450 19799353 74431050 74431049 74431952 903 ATGAGATTTTTATGATAAAGCTCAACAAAAAGACATATTCTTTGATAACTATCCTGTTACATACATTATCCTGTTAAATACACTACATGCATTTGCAGAACTCCTAACAGATATAACATATTTAATTTAGCCATGTTGTTGCAAAAACATATAATGCACCCTTTTTACTGTGGAGCTCCCCACTAATAGTGCT-ACAGCTTTATAGTTATACTGGGAAAGGAAGCATAATATCAAGTTACTAAGCA------CAGCTTTTTAAAAGTACTTCTTGGAGTTCACTTGTTTCTCCTAGTTGAATAAGTCCACATCATTTTCGACATAAATGGAACATCTTGTTTAGAAATATCCTTCATAGCTACTTTTTACTAACATGCCTTGCTACCTCTGCCTATCTAAATCAAGCACTGGCATATAAATGTCATATTGAAAGCAAATTTTTATCTTCTTCCAGAGTTGCATTG-ACATTTA-ATATATAGA-----------------------AATTATTTTGACAGTCCAAGCTCATCTCTAAAGTTGTCTGC----TGTCAAAAAATAAGAGGAAAGAGAGAAGAGCAATTTCA----TTTTTCAAGTTTTACAAAGAAAAAAGTTTTAATTAGTCAATCTGTTTTCCCTTCTTAGTGCACTCATATGTTCTAATATATTAGAATTAACAGGAGCTCTAACTCTGTACATTGTAACCATGTTGATAGATATTGGATTCACTAAACT-TTGAGCCAGGTAGCACCTTATACCATCATGAAATATTAGTGATGAATATTCTAGTAGATCACACTTTATGA----------ATCCTTTTATCATTCCTAACTTTTCTCCCCACTTTATTCGTATAGTATAGTAAATAATGAAGCACTGTATGCATGTTGACTTTGGTACTCTTTCCTCAAGCTAACCTAGGTTCTCCTTTCTTGATCTTCCT .::.x.........x:..:..x....xx:...x..:....::...:..x.:.....:.....::....--------------...x:::::.x..x.x....:..:.--.::x..:....:.....x.:.x:.x...x...xx.:.:..:..:.x:.x:xx..:x.-:.x.....:x.:..::..x::::x..-.....:...:..:.x.::.......x....:....:..x.:...........------..............:.:x.......::...x............:....x.xx.....:....x...x:..........:.....x.............x..xx..x.x......xx:....--..:..............x.............x:........................................::...x.........::-...:x:.-.:.:.:.x.-----------------------.x:.....:x:..x:.......x:xx...:.:x..:.....----.....:.......x..:...:.xx......::..x.:.----.....x..x..x....x....x...:..........:.x.....x:..x..-:..:.:.:..:..x:.::x.x.....:...........:..x.:x...:x...xxx:.......:...::....:.x-.x:..x.x...x.....:-x.....x..:..::.:x.:..x.x...x...............:...::x::x::.x.:::..:....:..----------.xx.........x:.:.:..--.:...:...:.x...:x.x:xx.x.x......:..::..::::.::.x:.x.x..:xx..:::.:-.x...:..:...--....:.xx.x...:.:x..:x.:x..::. 68M14I25M2I57M1I26M1D52M6D121M2I90M1D7M1D9M23D41M4D38M4D51M1I77M1I18M1D71M10D20M2I65M1I12M2I29M 608/877 69.3% 903/94230402 0.0% 77/877 8.8% 9936357 NA +3165 chr4 + 190214555 29743386 29743385 29743437 52 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGTAAGAAAATTAAGA chr4 - 94230402 6438506 6438505 6438557 87791846 87791845 87791897 52 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA ....:.....:.....::............::......x.:.:.:..x:... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 23304880 NA +8703 chr4 + 190214555 29750037 29750036 29750224 188 CAAGGAGCCTGCTGGAAATGTCAAGGTCACTAAGTATACCCAGATACCTCAGAAGACTAAATAAATATCCC---TAACGACTGCCAACTCAGTCTTGATCAGTGGTGAGGAAAAGGTCCCAGAACTGTTTGCTTCAATTGGCCATTTAAGTCTAATAGTAAAAGACTGGTTAATGATAACAGTGGATCGTA chr4 - 94230402 36101319 36101318 36101500 58128903 58128902 58129084 182 CAAGAAGACTGGTGGAACTGGCAAGGTCACGGTGTCTGC---------TCAGAAGGCTAAATGAAAGTTCTGTACATCAGCTGCCACCTCAGTTGTAATCAGTGGTGGAAGGGAGATCTCAGAACTGTTTGTCCCAATTGGCCATTAAAGTTTAATAGTAAAATACTAGTTAATGATTACAATACATTTTA ....:..x...x.....x..x.........x:x..x.:.---------.......:......:..x:.:.:---:.x.::......x......:x.:..........::::::..:..:............:::............x....:...........x...:.........x...:.:x..:x.. 39M9D23M3I117M 134/179 74.9% 182/94230402 0.0% 12/179 6.7% -6351282 -87879120 +13793 chr4 + 190214555 29779075 29779074 29779781 707 ATCATCCTTCA-GCAATATATGATGACATTTTGAGTACAAATATCAAGATTATTAT-TTTTAATATTAAATATTACCTGAGTGTTTAAAGTGGCTGAAGAGCATATTAATATTAAATATTATTTCTGACATTTTAAAAAGGTCAAATATGCTGCTGTTATACAAAAAC-TATTAGCAGAAACATCAAATTATTATAATCATTCTAAACACTAATTTGGTTC--AAAAGTTAACATTTAGGGAGTTTGGACTCAATATTTCTTCTCAGTGAAGGTCAACATAATTTCACTGCTCAAGTTTTTGCCAAAAAATTTTTCACTCCATTTGAAAATCCTAATTTAATATCAACATGGGCTTTGTCTCTAAGACTAAGTGAACATTTTAATT--TTTCCTGGATGACTACAGCTGCTATAGAAAAAAGTTTTTTCACTTCCAG--------------CTAACTCTTTTAAAAGTCATAAGTAATAATTGA---------GCACAAAATGTAGCTTGAGAAACTACAAGCTTGAGAAGGATGTTTGCT------TCTTTGTAATGGAAAGAACAAATTCTTCTCCACTATTCACCAA------TGACTCAATAGAGGGCTAGACCTTGAGAACTAAGTATCAG-CTGCCTGTCTAGTATTTCAAAC-TTATTCTATTGCTTACTGCTTATTCTAATATTTATAAACTTTAATAGAATATTTCTCTCATTTTAAAGCAATAAGCGGTCACAAGGAGATT chr4 - 94230402 19812438 19812437 19813134 74417269 74417268 74417965 697 ATCACTGTTCATGCAATATTCAGTGACATTTTGAGTACAAATACCAAGATTATTACCTTTTAATATTAAAAATTATACAAGTGTTTAAAGTGTCTGTGAAGCATATTCACATTAAATATTATTGCTGACATTTTGGAAAGGTCAAATTGGACACCCTTATGCAAAAGTGCATTAGCTGCAAAACAAAATTATTACCATTATTAACAATAATAATTTGATTTGGAAAAGATTAAATTTGG--------------AAATCTTATCTGTTTACAAGTTAACACAATTAC-CTGTTTAAA-TTTGGTCAAAA----TTGCAATCT-CTTGAACATA-----GTAACATCAACATCAGGTTTTTCACTGAATTCCATCGAAATTATTTATTTATTTCCCAGACAGACACA-----TACTGAAAAAA-----TACAGCTGCAGACGGGAGGATGCCCTTATTTCCCTTACACAGCAGATATAATTACTGAACTCCCTATGCATAAAACAAAG-GTGAGTAGGTG-AAGC-CAAGAAAGATGTTTGTTTACAACTCTCTGCAGAAGAAAAAGCTAA---CATTCTATAAATTACCTAATTCTTTGCTTGAACAGAGGGCTAGATCCTGTGCAGT---CATCAGTCTTTTTCCCTAGAGAGTCAAACTTTTTTCTGTAATCCAAAACTTTGTTT--TGCTTAGAAACTTTATTAG--CACTAAACTCATTTTAAATTAA-----GGTAATAAAGGAACT ....::x....-.......x:::....................:...........:-.............x....:x::.............x...x::........x.:.............x..........::...........xx.x::.:x....:.....::-:......x.x..x.:x.........:x..:...xxx..:.x.......:..:--.....x.x.x....:.--------------.x..:.:x...xxx.:x.:..:....:....x.-...:.:..:-...x.:.....----..x..x..:-:.....x..x-----x...:........x:.x...x..x..:.:x::x.x:...xx.x..x...--.....::..:::x:...-----..:x.......-----.x..x:.x...--------------:..x:..::...x.x:x..x.x:....x.:...---------...:....::x..-x....x.:x.:-....-::....:........:.------...:..:.:x:....:.:.x..---:x:..:.:x.x.:...x.------..x:.x..:...........:.:..x.x.x.---:.....-..x::.x:....x:xx......-..x....:.x::::.xx:...xx.:.--.::...x........x...--:.:.xxx...........x:..-----...x.:..:.::.:. 11M1I44M1I111M1I52M2I16M14D33M1D9M1D11M4D9M1D10M5D49M2I17M5D11M5D11M14I33M9I13M1D11M1D4M1D17M6I22M3D18M6I31M3D6M1I22M1I26M2D19M2D22M5D15M 451/653 69.1% 697/94230402 0.0% 98/653 15.0% 9966637 NA +3015 chr4 + 190214555 29795724 29795723 29795785 62 GCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAATTGGTCAAAGCAGGT chr4 - 94230402 80007167 80007166 80007228 14223175 14223174 14223236 62 GTAAGGGCGTATTTTTAGAAAAAAAAAAAAAAAGAGAAAAGAAAGAATTAATTAAAGTCAGT .:...:x:x.:.:.:x.:...............:.::............::.:....:x:.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -50211443 -44018959 +3254 chr4 + 190214555 29816568 29816567 29816639 72 AGGAGGAGGAAGAGGATAAGGGGGAAGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGGAAGAGA chr4 - 94230402 36691892 36691891 36691963 57538440 57538439 57538511 72 AGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAA .........:..:.:....:..:::....:.x:.x::..:.:......::.x.:..:....::..x..x.:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% -6875324 -87355078 +12297 chr4 + 190214555 29817921 29817920 29818298 378 GGAAACTAATTCTGCTTGTTCTTTTTCAAATACTGTATTGCTTGAAGAC-TTTGACAAACTGTGTAATGATGGGTTTAGTCCCTAGTAATGAATGTCACGATCCTAACAATAAGATCCAACAAACAATTTGAAGTGATGTAATGCA-----TGGTGATTCTG--------------TGTAGAGTATACACAGAGTCTGATTGGTCTAAATAATTACTGGAGTTTGGCGGAGATGTAGCGTGCACAACCCACCACGATGGCACCTGCTGGGACTGTACATTATTTTGAAAAATAATAGGTTCTTTCAAAGAAATGAAAGCTTTATAGTACAGTAATTGAATGCAGGCATCAATAAACTTGCTTTCTTTGTGTTCTTGAGAATCTCTTTATTTTGGGGTT chr4 - 94230402 19828553 19828552 19828940 74401463 74401462 74401850 388 GAAAGTTAATTCCACTTCTTCTGTTTAGGCTGGTACATTGCTTTAAACCCTTTGACAAACTGCTCAATGAAATGTTTAGTCTC-AGTAATGAATGTCATGATCCTGAAAATGAATGTGGTAAAGCAGTTTAGAGCAATG--ATACAGGAATTGTTGACTTTTCATTTATTTATTTTTGTGGA--ATACGCACAGTCTAGCTTGTTGAAG--ACTCTCCATACCTGGCTGAGATGCAGTATGCATGGCCCAACATTATAAAACCTGCTGTGACTTTGCATTATGTTTCAAAATAATAGGTAAT---AGAGAAGTGAATGCCTTATACTACAGTAATTGATTGCAAGCATCAATACAGCAACTGCTTTTGTGCAGTCAAGAATGACTTTATTTTAGGATT .:..::......::...x....x...x::x.:x.::.......x..:x.-............:x:.....x:x........:.-..............:......:.x...:.:xx:x:xx..:..:...::..::...--..:..-----..x...:.:.x--------------...:..--....:..x.....:::.x..:x..:--.:.x::x:x:::....x......:..::....:::....x..:x..::x........x....x.:......x..xx............xx.---.:....:....x..:.....x............x....:.........x.x:x:..x::......:xx.::.....xx.........:..:.. 49M1I33M1D55M2D5M5I11M14I6M2D25M2D91M3D93M 255/368 69.3% 388/94230402 0.0% 30/368 8.2% 9989368 NA +3321 chr4 + 190214555 29878125 29878124 29878191 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACTATTATGAAAACAACAACAAAAATAAAAGC chr4 - 94230402 30152097 30152096 30152163 64078240 64078239 64078306 67 AAAAAAAAAGAAGCAAGAAAACCAACCAGAAACAAACTATTTGGAAAACAACAACAGCAACAAAAAC .........:..:x..:....xx..xx.:...:x.......xx.............:x..:....:. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -273972 -93956430 +10364 chr4 + 190214555 29878951 29878950 29879423 473 TATCTCAGTTTGAAATATACCTAATCTGAAATGTATTATTTTTTGGTATTTTGAGAACTG-------ATCAAATTTTATTGGGCAGACTTTTCTCTCCATGAAAGCATTTGCATTGTACTC--TTAGCAGTAACATGTAAACAAGATCAATGTATAGATAAACAATATTGCAT-----CATCTTATCTTGTCATAAAAGAATCTTAATAAT-CAAACACTGCTTATATCA----AACTAATTTTCATTCAGAAAATTTACAGTGTGTATCCTACATATTTTCCTCCCCACTGAT----TTTTGTATGGCCTCTTTTCCATAGGCAGGTATTTTCAATATAATTTT-ATTACTCTAATTTATTAATCTGA---------GAGAAACATTCCAAATTAAAAATATTTTCAATCAATATGTTCCAGTCGACTAAAAACTGCTTTGGCCATGTTAACCTGATACTTTATATGCTTAGAATGAAAGCAAGTGTGATAGCTAGGAAAACCTA chr4 - 94230402 19852718 19852717 19853206 74377197 74377196 74377685 489 TGTATCAATTACAAGTTTAATTCAATTGAA-TACATTGCTTTTTCATAATTAAGGAATTGGAATGCTAACATATATTTTTGAA-AAACTTATATTTAACTGACAGTCTTTAATATGTTGTCAGTCATCCATAACATAAAAGTAAGTACA--TTAAAAATAAA--ATAGTGAATATAAACAT------TCATGAAAAAAAAGTGTTCAAAATGCAAATGTGGCATATTTCAGATGAACTAATTTCCGTTCACAAAATTTACAGATAACAATTCACATCTTTTCCTCTCCATTGACGGAACACAACATGCTCTCT----CACATGCAGGTATTACTAACATGATTTTTATTGCATTAATTCATTAATTTGACACAGACGTGTCAGACATTCCAAACTGACA-TAATCTCTGTCAAAGTGCTCCAGTCTGCTGAAAACTGCCTTGGTCATATCAGTTTTCTTTTTTATATGCTTAGAATGAAGATAAGTGTGGTACCAAGTGCATCCTA .:.x...:..xx..:.x..x:.x.x:....-.::...::.....x:..x..x::...:..-------.x..x..x..x...::-.:....x.x.:.xxx...x..:x...:xxx...xx..--.:.x.x:......:x..::...xx..--x..x.:.....--...x..x..-----...------.::.x.x....:.:.x..x.x...-....:::x..x...x...----.........:.:....x...........xxx::.x:::....x........:...:...:----:x:x::...x:....----..:.x.........x::..:..:.....-...:.x:.....:......:...---------.xx.:..........:.:.x.-..x.:..x:....x:..:.......x:..:........:....:...:.:.:::.xx.x:...................:::.......:..x.x..x:x.x.... 30M1D29M7I16M1D37M2I26M2D11M2D9M5I3M6D24M1I18M4I60M4I15M4D28M1I23M9I21M1D106M 308/456 67.5% 489/94230402 0.0% 50/456 11.0% 10026233 NA +3756 chr4 + 190214555 29938998 29938997 29939080 83 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCGTTCCTAAGTCTCCCAAGTAGCTGGGACTACAGGTGCACACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:.............x...x.:xxx..x..:..::...........:......x...--.......:.. 71M2D10M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 11741872 NA +3193 chr4 + 190214555 29955983 29955982 29956044 62 AGAGCCTACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAA chr4 - 94230402 71125465 71125464 71125526 23104877 23104876 23104938 62 AGAGTCTGCATCAAATCTACCAAGAAATAAAAAATAAAAAAAGAGAGAGAGGAAAAAAAGAA ....:..:.x.....xxx.xx..:...x......x.........:...:.:....:...... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -41169482 -53060920 +3032 chr4 + 190214555 29955995 29955994 29956076 82 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAAAGACAAAAGGAAA chr4 - 94230402 45355417 45355416 45355498 48874905 48874904 48874986 82 AAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAA ..:.:.x.x...x.xx.:..:.x...:...:x....:...:...x..x.:.x:..:.:.:.x...x.::...:......... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -15399422 -78830980 +3151 chr4 + 190214555 29956000 29955999 29956082 83 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAA----AAGACAAAAGGAAACTTGTT chr4 - 94230402 70253822 70253821 70253908 23976495 23976494 23976581 87 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAACttttt .:...:.xx.::.......:..............x::.x:.:x.........x.x.:.x....----x.:.:....:::.....x.. 63M4I20M 58/83 69.9% 87/94230402 0.0% 4/83 4.8% -40297822 -53932580 +3121 chr4 + 190214555 29956008 29956007 29956070 63 AAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAAAGAAAAAGACAAA chr4 - 94230402 93378367 93378366 93378429 851974 851973 852036 63 AAAAATAAAAACCCACAAAACGAGAGGAGAGGAACAAAAAGAAAGAAGAAAGGAAAGGACAAA .....x.....xxx.x.:..x..:.:..:..:..x....::......:....:...:...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -63422359 -30808043 +7452 chr4 + 190214555 29963204 29963203 29963591 388 TCAGCAGTCAATTTGTTGGCCTTTTCTTTCAAGGCATTTGTTTGCACCTTTTGGGTTATGATTTCCAACATTTTCTTCTGGATATAAAGGACCTATTGGTATTGACCATCAGAAGTTTTCCACATCTGTTTCCT----TTTGTAGTAAAAATATCACAAAACATGTGAACCACCTAAATGTCAACAGTGGTGACACCAATGTGAGTTTCAGTCATAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCATTTTTTGAACATGGATCCCATTTGGTCA-GGGTAAGATACATACC-------CTACTCAGGCAGTTTTTTGCCATGAACTTCCTCAATAATTAACCTGAAATTTCTAAAAGCAATTTTATCATTATACA--------AGGCTTACTTCAAAAAACACAGTCCTTGAAGCTACCAAATACAATTT chr4 - 94230402 59859650 59859649 59860214 34370189 34370188 34370753 565 TCAGCTTACAGCTTATTGACAACTTCTTTCAGGTCATTGGTCTGGACCTCTCGGGTCATGATTTCCATCATCTTCTTGCGAATCTGCCGAACCTGCTGATGCTGGGCATACGAGGTCTTGCGGATTTGGTTATTACGCTTCTTTGTGAAACCCACACAGAAGAGGCGCAGTAGGTAACCATCCGTAGTTTTGACATCCACGTGGGCTTCAATCATCGTCTGGAAAAGAAACAGTTATGCCCATGACAGGCCTCCCAGACGTGCACCTGACATTCATTAATATCCGCCAATACCATCAGAAACAGCTTTAGGGCACACCAGTAGCCACTTCCTTTCCTAAAGAGGAAAGCAGTAACGCAGACCTTGTTCTTTACACACCTGCCACTTCTTCACCATGGAACACATTTTGTCGCGGGTGAGGTCCATTCCATGGAAGTTGGTCAGACAATTTTTC-CCCTGAACGTCCTCAGTTATCAGCTTAAATTTACGGAAGGCAACCTCATCGTTCTGCAGATCAGCCAGACTCACTTC-AAATACACGACCCTTCAAGCCATCAGAGGCAATTT .....xxx..::..:...:.xx:........:.x....x..:..x....:.:....:..........x...:.....x:.:..x.:xx.:....::..:.::..:x...xx..:..:..x.:x..:..x..x:.----..:x.x..:...x:xx....:..x.x.:.x.x:.xx...x::..x::...xx.....:.x.:...:.:....:....x..---------------------------------------------------------------------------------------------------------------------------------------------------------------......:..:..x.x......x.x.....x...:-....:..:.x...x..-------:.:x....:..:.....:-..x.....x......:.x..:.:.:.:..x..x.x:..:....::.:...:..x.:..--------..:..:.....-...x....:::....x....:.:..:.x:...... 134M4I80M159I34M1I16M7I18M1D58M8I11M1D35M 259/386 67.1% 565/94230402 0.0% 181/386 46.9% -29896446 -64333956 +4409 chr4 + 190214555 29963694 29963693 29963761 68 CACTTTATTTGTGGCTCCCTTTTTGCTGCCTTTTGTAAGGCGCTTGTTCTTGCCAATTGCCATAGTGC chr4 - 94230402 59861544 59861543 59861611 34368792 34368791 34368859 68 CACTTTCTTCTTGGCGCCTTTCTTGCCGCCCTTGGTGAGGCGCTTGTTCTTGCCGACCGCCATGGTGC ......x..:x....x..:..:....:...:..x..:.................:.::.....:.... 68M 54/68 79.4% 68/94230402 0.0% 0/68 0.0% -29897850 -64332552 +3999 chr4 + 190214555 30008886 30008885 30008964 79 AATATATATACACACACACATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGT chr4 - 94230402 61485372 61485371 61485449 32744954 32744953 32745031 78 AATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT-TCTGTAGATGTATAGATAGATAGGTGT ......:.....:........:....:x.:...:.....:...:.x.....-.x...:x:......x...x:..x.... 51M1D27M 60/78 76.9% 78/94230402 0.0% 1/78 1.3% -31476486 -62753916 +3469 chr4 + 190214555 30008887 30008886 30008967 81 ATATATATACACACACACATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGTGTG chr4 - 94230402 71630142 71630141 71630222 22600181 22600180 22600261 81 ATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ..::.............x...:......x.x.:....::.....x.::..:.:x:.:.....:.x.x:x..x..x.x.... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -41621255 -52609147 +3173 chr4 + 190214555 30008895 30008894 30008964 70 ACACACACACATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGT chr4 - 94230402 53500328 53500327 53500397 40730006 40730005 40730075 70 ACACACGCAGAGGCACATACGTGTGCATGTGTGAGTGCATATATATCTGCATATGTACTTTCAAATGTGT ......:..x.x:......::...::.......x..::........x..::.:.:..:x.x::x...... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -23491433 -70738969 +3022 chr4 + 190214555 30008905 30008904 30008962 58 ATACACATATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGT chr4 - 94230402 19704280 19704279 19704337 74526066 74526065 74526123 58 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT .....:.....:......:.x.......:.x:..:.........:.:x..x.xx:... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 10304625 NA +3013 chr4 + 190214555 30008913 30008912 30008993 81 ATATGTATATGTGTGTGTATATATATATGTGTGTGTATATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.:...x.....x..x.x....:.:::.:x:x:..:.....x..........:..x..:.x::.:..x:....:. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -51392380 -42838022 +3195 chr4 + 190214555 30008951 30008950 30009029 79 ATATATGTATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATA chr4 - 94230402 81401293 81401292 81401371 12829032 12829031 12829110 79 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTA ....x.x.:...x.....x.:x.x......:::.:x.x...:..:..x.............x..:.x::.:..x..:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -51392342 -42838060 +3077 chr4 + 190214555 30008954 30008953 30009046 93 TATGTATGTGTGTGTGTGTATATATATGTGTGTG-TGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGT chr4 - 94230402 35554923 35554922 35555016 58675387 58675386 58675480 94 TATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT .....x.x.x...x.x.::.xx.x..x..:.:x.-.:x......x..x........::.:.....x....:........:..:::x:x...... 34M1I59M 63/93 67.7% 94/94230402 0.0% 1/93 1.1% -5545969 -88684433 +3082 chr4 + 190214555 30008971 30008970 30009036 66 GTATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGT chr4 - 94230402 39267142 39267141 39267207 54963196 54963195 54963261 66 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATAT .....x..:.....:..x.:::.::.:xx.........:......x.....::.x.:....x..:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -9258171 -84972231 +3050 chr4 + 190214555 30008995 30008994 30009060 66 ATATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTGT chr4 - 94230402 86633730 86633729 86633795 7596608 7596607 7596673 66 ATATGTACTTGGAAGTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTAT ......::x..x:x:.x.x.:...x.:..........x..x....:..........x....x..:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -56624735 -37605667 +3220 chr4 + 190214555 30008996 30008995 30009083 88 TATGTGTGTGTGTATATATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTGTGTGTGTGTGTGTGGATATATGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ..:...::..::....:.:.::::x:.:..:....x.x...:..:......x..:..:.:x:.:.......x.x:x..:..x.x.... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% -41621139 -52609263 +3188 chr4 + 190214555 30009012 30009011 30009079 68 TATATGTGTGTGTATATATGTATGTGTGTATGTGTGTGTATATATGTGTGTGTGTGTGTGTGGATATA chr4 - 94230402 39267143 39267142 39267210 54963193 54963192 54963260 68 TATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ....x:.........:x::.:.:...xx.:..............x.....::.x...:..x:x...:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% -9258131 -84972271 +3089 chr4 + 190214555 30045084 30045083 30045131 48 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTTATTTTTTTT chr4 - 94230402 36600615 36600614 36600662 57629741 57629740 57629788 48 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTT .:....:..:..:...:.:.::..........:.....:....:.... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% -6555531 -87674871 +4055 chr4 + 190214555 30063067 30063066 30063262 196 AAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---------------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG------AAAGAGAGAAAGAGAGAGAAAGAGAAAGAA---AGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAAATCA chr4 - 94230402 56098324 56098323 56098544 38131859 38131858 38132079 221 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTA .:..:x...x..x....x..x:....:.:.x.:.::x..x....:.---------------.x.:...::x:.:.x::.x..::.......------.:..xx:.:..:.::xx.:.....xx:.:.---.:.x....:...-...:..xx.:....x.:...::...:....:..:.:x:.:..::::.......:xx..:...:xxx..........:. 46M15I30M6I30M3I12M1I78M 120/196 61.2% 221/94230402 0.0% 25/196 12.8% -26035257 -68195145 +3276 chr4 + 190214555 30063072 30063071 30063225 154 AAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 29503820 29503819 29503974 64726429 64726428 64726583 155 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGC-AGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGA .....:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x:x..:x..x..x:..x-......:x.xxx...:xx.x:.:...x::.:x......--.....:xxx::.:x....:.x...::.:. 86M1D38M2I29M 91/153 59.5% 155/94230402 0.0% 3/153 2.0% 559252 NA +3166 chr4 + 190214555 30063081 30063080 30063164 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x..::.:...:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -6795213 -87435189 +3068 chr4 + 190214555 30063097 30063096 30063179 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAG-GACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:x-....:.....:...-..x.::..x..::.......:. 46M1I14M1D22M 59/82 72.0% 83/94230402 0.0% 2/82 2.4% -6795197 -87435205 +3055 chr4 + 190214555 30063109 30063108 30063191 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx:.::.:.::..:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -6795185 -87435217 +4160 chr4 + 190214555 30063121 30063120 30063238 118 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGA----GAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA .:.x.:....:..........::.:.:....:.:...----..:....x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.:..:..x... 37M4I81M 77/118 65.3% 122/94230402 0.0% 4/118 3.4% -470043 -93760359 +3388 chr4 + 190214555 30063134 30063133 30063236 103 GAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAAGAAAAA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x.:....x.:x........:x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:..--..:........::...x.:. 83M2I20M 68/103 66.0% 105/94230402 0.0% 2/103 1.9% -31271567 -62958835 +3268 chr4 + 190214555 30063156 30063155 30063240 85 GAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ....:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..:.:..:...... 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -6795137 -87435265 +3209 chr4 + 190214555 30063161 30063160 30063265 105 AAAGAGAAAGAAAGA------AAGAAAGAAAGAAAGAAAGAAAGAAAG------------------AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAAATCATTT chr4 - 94230402 22228856 22228855 22228984 72001419 72001418 72001547 129 AAAGGAAAAAAAAAATCTCACAAAAGCAAATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGGCAGTCAGTT ....::...:...:.------..:.:x:..x.....:x...x:.::..------------------.:.:::.....:...:.....:...:..:......x..::.:x....:::....x.:...x.. 15M6I27M18I63M 70/105 66.7% 129/94230402 0.0% 24/105 22.9% 7834305 NA +3273 chr4 + 190214555 30063161 30063160 30063259 99 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA----GAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAAGAA-AAAAAAGAAAAGAGAAAA------AAAGGAAA chr4 - 94230402 30533164 30533163 30533277 63697126 63697125 63697239 114 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGA ...x.:....:..........::.:.::...:.:.:.----....:.:x:..:.----.:.x.....xx....x.:.....-:.::..:...........------......:. 37M4I13M4I23M1I18M6I8M 72/99 72.7% 114/94230402 0.0% 15/99 15.2% -470003 -93760399 +3155 chr4 + 190214555 30063162 30063161 30063258 97 AAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAA chr4 - 94230402 44053989 44053988 44054085 50176318 50176317 50176414 97 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAA ....:x:::::.........::...:.::x......:x::.:.:.x::.xxxx:.............:.x.....x:.:x.x.:....x.:..:... 97M 59/97 60.8% 97/94230402 0.0% 0/97 0.0% -13990827 -80239575 +3536 chr4 + 190214555 30063173 30063172 30063302 130 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAAATCATTTTTTGCTTGCAGTTCTGCAGTTGGAGCAAGTGTTACTG chr4 - 94230402 36858294 36858293 36858418 57371985 57371984 57372109 125 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTT---CTTACAGAACTTTGGGTGGG--AGGTGTTGCTG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::..:..::.x.::..x....:..:....:.xx.x...x..---...:...xx..x::.x...:--.:.....:... 94M3D20M2D11M 80/125 64.0% 125/94230402 0.0% 5/125 4.0% -6795121 -87435281 +3135 chr4 + 190214555 30063206 30063205 30063278 73 GAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAGAAAAGAGAAAAAAAGGAAATCATTTTTTGCTTGCAGTT chr4 - 94230402 50240845 50240844 50240917 43989486 43989485 43989558 73 GAGGAAAAGATGGAAATAGATCCAAGAAGGAAAAAAAAAAAAAGAAAAAAACAATCATTATTTTTTTGAAGTT ..:::.....x:....x.:.xxx.....::....:....:.:.:.....::x.......x...x:...x.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -20177639 -74052763 +3391 chr4 + 190214555 30073794 30073793 30073860 67 TGCATGCATACATATATATATATATACATATATATATATGTATATATATATATGTATATATATATGT chr4 - 94230402 71630139 71630138 71630205 22600198 22600197 22600264 67 TGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..........:.:.:.:.:.x..........x.x.:....:..:.:.x.::....:x....:.:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -41556345 -52674057 +3087 chr4 + 190214555 30073887 30073886 30073952 66 ATATATATATATGTATATATATATATATGTATATACATACACACACACCCAGGTAGCTACCATTCA chr4 - 94230402 45565800 45565799 45565865 48664538 48664537 48664603 66 ATAGATATGTATGTAAATGTATGTATATGTATATCCATAAACATGAAATCAAATGGCTTCTGTGCA ...x....:......x..:...:...........x....x...::x.x:..::.:...x.::.x.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -15491913 -78738489 +3039 chr4 + 190214555 30073889 30073888 30073948 60 ATATATATATGTATATATATATATATGTATATACATACACACACACCCAGGTAGCTACCA chr4 - 94230402 25393259 25393258 25393318 68837085 68837084 68837144 60 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCA ..:.:.::....:...:...:...x...:.:....:........:.x..x..xx:..... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 4680630 NA +3144 chr4 + 190214555 30094335 30094334 30094402 68 GAGAGAGGGGAGGAAGGAAGAGAGGGAGGGAAGAAGAGAGGAAGGAAGAAAATGAGGGAGGAAGGGAG chr4 - 94230402 10584954 10584953 10585021 83645382 83645381 83645449 68 GAGGAGTAGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGAG ...:::x:....:.:....xx.::.x...:...:.:..:::.:..:::.......:.....:...... 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 19509381 NA +3038 chr4 + 190214555 30114598 30114597 30114678 81 TTTATTTTTTCTTCTTCTTCTTTTCTTTCTTTCTTCCTTTTCTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTGATA chr4 - 94230402 19053884 19053883 19053964 75176439 75176438 75176519 81 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATA ..:x..::..x.:.:..x.:xx..::...x...:..:.......xx.....x:..::.:..........:.:.x:..x... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 11060714 NA +3023 chr4 + 190214555 30138305 30138304 30138371 67 CTGCAACCTCTGCCTCCTGGGGTCAAGCAATTCTCCTTTCTCAGCCTCCCAAGTAGCTGGAATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:.....x.....::x...x.xxxx........::.............:.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 11941179 NA +3440 chr4 + 190214555 30158075 30158074 30158141 67 CTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCACGTCTCAGCCTTCCAAGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:.:.........:xx...x..x.x.........:...........:.:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 11960949 NA +3032 chr4 + 190214555 30169298 30169297 30169370 73 CCATTATGTGTATGTCTCCTCTTCTCATCTCTCTCCAACCTCTCTCTCTCTTTTCTCTCTCTGTCTCCCTACT chr4 - 94230402 19844634 19844633 19844706 74385697 74385696 74385769 73 CCATTAAGTGGATGTCTCCTCTTCCCACTTCACCGTTATCTAGTTTTTTTTCCCCCCTTTCTGCTTTTCTACT ......x...x.............:..::..x.:x:x.:..xx:.:.:.:.:::.:..:....::.::..... 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 10324664 NA +3823 chr4 + 190214555 30183717 30183716 30183844 128 AAGGGAAAGAAAGAAAGACCGACAGAAAGAGAAAGAAAGAAAGA-AAGAAAGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAA chr4 - 94230402 45355411 45355410 45355537 48874866 48874865 48874992 127 AAGGGAAAGAGATATAAAT--ATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA ..........:.x.x.:.:--.:x::....x.......:x....-...:...x..x...x.........x.::x..:.::x..:.:::...x.....xxx.x.:.....:.x.x:x:.....:::.... 19M2D23M1I84M 83/126 65.9% 127/94230402 0.0% 3/126 2.4% -15171694 -79058708 +3291 chr4 + 190214555 30183735 30183734 30183828 94 CCGACAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858283 36858282 36858376 57372027 57372026 57372120 94 CTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .::...:x.x......x.:xx..x.....x...::.:...........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -6674548 -87555854 +3020 chr4 + 190214555 30183738 30183737 30183816 79 ACAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858298 36858297 36858376 57372027 57372026 57372105 79 ACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....xx.:x.....x...::...:...........x..x.:xx..::::::...:.:..x..::.x..::.......:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -6674560 -87555842 +3609 chr4 + 190214555 30183742 30183741 30183854 113 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA------AGAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.::.:...:.:.----....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..------.:.:..:..:..x.... 37M4I59M6I17M 74/113 65.5% 123/94230402 0.0% 10/113 8.8% -349422 -93880980 +3178 chr4 + 190214555 30183765 30183764 30183855 91 AAGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGA chr4 - 94230402 36858285 36858284 36858376 57372027 57372026 57372118 92 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x..x.x......x.:xx..x.....x...::...:.........:.x..x.:x-....::....:..:::x.:.:.x..::.......:. 55M1I36M 61/91 67.0% 92/94230402 0.0% 1/91 1.1% -6674520 -87555882 +3041 chr4 + 190214555 30183766 30183765 30183859 94 AGAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA---AAGAAAGAAGAAAGAAAGAAAGATCTT chr4 - 94230402 36858294 36858293 36858390 57372013 57372012 57372109 97 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTTCTT .....x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:---......::.:....xx..x.x.x.... 67M3I27M 62/94 66.0% 97/94230402 0.0% 3/94 3.2% -6674528 -87555874 +3128 chr4 + 190214555 30198582 30198581 30198634 53 AAACCTTTCTTTCTTTCCCTTCCTTTCCTTCCTTTCCTTCCTTTCCTTTCCTT chr4 - 94230402 53815605 53815604 53815657 40414746 40414745 40414798 53 AGATTTTTCTTCCTCTCCCCTCCTTTCTTTCCCCCCCCCCTTTTTTTTTCCTT .:.::......:..:....:.......:....:::..::.:...::....... 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% -23617023 -70613379 +3747 chr4 + 190214555 30198597 30198596 30198722 126 TCCCTTCCTTTCCTTCCTTTCCTTCCT---------TTCCTTTCCTTCC------CTCCCTTTCTTTCTCTTTCTTTCTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC chr4 - 94230402 86872021 86872020 86872159 7358244 7358243 7358382 139 TCTATTCATTTCCTTCCTCTTCTGTCTGCATTCTAATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTC--TCAAGTCCCTTCTCTTTTCTCCCCATCTCAGCCATGGTCTCCTTTTC ..:x...x..........:.:..x:..---------...:xx.......------...:.:x.:.......:....:::..:..x....:::--..xxx..:........:...:.:.x....xx.:x.xx...:..:... 27M9I13M6I37M2D47M 85/124 68.5% 139/94230402 0.0% 17/124 13.7% -56673424 -37556978 +3368 chr4 + 190214555 30198598 30198597 30198685 88 CCCTTCCTTTCCTTCCTTTCCTTCCTTTCCTTTCCTTCCCTCCCTTTCTTTCTCTTTCTTTCTTCTTTTCTCTTCTCTTCTCTTCTCT chr4 - 94230402 91204554 91204553 91204641 3025762 3025761 3025849 88 CCCTTCCTGTACTTAATTTGCTTCCTTTTCCTTCTTTCCTACCCCCACCTTGTGTTTCTCCTCCCATCTTTCTTTTCACCCTCTATCT ........x.x...xx...x........:.:...:....:x...::x.:..x.x.....:::::.x.:.:....:..x:.:::.x... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% -61005956 -33224446 +3186 chr4 + 190214555 30222650 30222649 30222719 70 ATATATATATATATATATATATATATATATATATATATTTGTTTGTTTTTTTGTTTGTTTGTTTTTTCCT chr4 - 94230402 56681929 56681928 56681998 37548405 37548404 37548474 70 ACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTT .:.....xx.x.x:......x:.:....x:.:...:..x...xx.....................x.::. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -26459279 -67771123 +3202 chr4 + 190214555 30250439 30250438 30250486 48 TGGCCCTGGACTTTGTTGTTATTGTTGTTTTTGTTTGTTTGTTTTTAT chr4 - 94230402 4919473 4919472 4919520 89310883 89310882 89310930 48 TGGTGGTAGGTTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTTAT ...:xx.:.::...x.....:........................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 25330966 NA +12736 chr4 + 190214555 30276677 30276676 30276988 312 TTCTTTATTTTATTGTTTTCTTTAATTTGATATACTTTTCTTTCTTATTC---ACTAGCTTCTGATGTACTTTTTATTATTTTTTTTTCTATTCTGACTAGTTTAAGTGCCCTTGTCAACAGTTCAGTTGCTGAATGAAGCAAAGTGTTAGTTA-TAGTGTGAAAATCTGGTGTGCTGTCAGAAAAGGGCAAGACATTAACTTGCGAATTTTGACTTCCAGTGTTCCATAG-CTCAATGATGGCTGAA-AAGCCTCTCTTATGAATTACTGTTAGGGGTAACATGGCAGAAGCATTTATGAAGCTTTGTAATTATGCA chr4 - 94230402 19950435 19950434 19950734 74279669 74279668 74279968 300 ttttttcttttttctttttttttAAATC---ATATTTTTCTGCCTAATTCCAAACTGGCTTTTGATTTACTGG-----ATTTCTTCTGCTTTTCAGACTTGCTGAAGTGCTCTTGTCAACAGTTCAGTGGTTGAATGAAGCAAAGTGTTACTTAATAGTGTGAAAGCTTGGTGTGCTGTCAGAAAAGGGCAGACCATTAACTTGTGAAATTTTGCTTTCAATGTTCTGCAGTCCTAGTGCTAGCAGAACGAATCTCACTGACAA-----TGTTA-----CAAATGGCACATGAATTTATGCCACTTTGTAATTAAGCA ..:...x....x.:x....:.....x.:---...:......x:..x....---...:....:....x....xx-----....:..:.x..x...x....x.:.x......:.................x.:...................x...-..........:::.......................::x..........:...x...x:...:..:.....:::..-.::.:..x.:..x...-:.::...x..x.::.-----.....-----x.x......x.x.x.......xx:...........x... 28M3D19M3I20M5D76M1I76M1I16M1I15M5D5M5D39M 228/294 77.6% 300/94230402 0.0% 24/294 8.2% 10326242 NA +3091 chr4 + 190214555 30278526 30278525 30278589 64 CACGCACGCGTGTATACATGTATACACGCACGCGTGTATAGATACATGTATACACGCACGCGTG chr4 - 94230402 7596412 7596411 7596475 86633928 86633927 86633991 64 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ..::..x::.::..:.x.......:..:.....:......x.x....:..:x:........::. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 22682114 NA +3052 chr4 + 190214555 30291990 30291989 30292055 66 AGTTGGTTCTGCCCAAGGACTGAGAAATTTGAAAACAAAACAAAACAAAACAAAACAAAAACAAAA chr4 - 94230402 88372070 88372069 88372135 5858268 5858267 5858333 66 AGTCTGTTTTGCATAAGGTTTGAATATTATGCAGGAAAAACAAAACAAAACAAAAAGCAAACAAAA ...:x...:...x:....x:...:x.x.x..x.::x...................x:x........ 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -58080080 -36150322 +3754 chr4 + 190214555 30316099 30316098 30316209 111 CCTTTCTCAAAAAAAAGAAAAAAAAGAAGAAAGAAAGAGAAAAGAAAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGACAGGAAGGAAGGGAGCAAGGAA--GGAAGG chr4 - 94230402 53683447 53683446 53683554 40546849 40546848 40546956 108 CCATTCTGAACAAAAAGAAAAACAAGAA-----CTGGAGGGAATCAAAATCCAAAGGAAGGAGAAAACAGAAAGAGAAATCAATAAGAAGCAAGGAAGCAAGAGATTGGAAGG ..x....x..x...........x.....-----xx:...::..xx..:.xxx....:...:.::...x...:.....:.xx:.:.:....x....:......::.--...... 28M5D72M2I6M 75/106 70.8% 108/94230402 0.0% 7/106 6.6% -23367348 -70863054 +3266 chr4 + 190214555 30316209 30316208 30316344 136 GAAGGGAGGAAGGAAGGAAGGATAAAGGAAG-GAAGGAAGGAGAAGAGAGAAAGAAAAAGAAAGAAGAAAGAAGAAAGAAAGAAAGACA--GGAAGGAGGAAAGGGAGGAGAAGAGAGAAAGAAAAAGAAAGAAAGAAA chr4 - 94230402 89963534 89963533 89963672 4266731 4266730 4266869 139 GAAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAAAAATCGAAGAGGAAA ...::.::..:::...x..::x.xx..x.x.-...:x.:xx......:..:x...:....xx::.....x:..::x.......x::...--...:..x:.xx:x...:..:......:..x:.....xx:.::.:.... 31M1I57M2I48M 82/136 60.3% 139/94230402 0.0% 3/136 2.2% -59647325 -34583077 +3023 chr4 + 190214555 30333298 30333297 30333365 68 ATATATATGTGTGTGTGTGTGTGTGTGAGTATATATACACACATATGCACATGTATATATATATATGT chr4 - 94230402 35554961 35554960 35555028 58675375 58675374 58675442 68 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGT ......x..x.........::::.:.....:......:.::....::x.x....:..x.x..x:.x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -5221663 -89008739 +3388 chr4 + 190214555 30333348 30333347 30333430 83 ATGTATATATATATATGTGTGTGTATATATATATGTATGTGTATATATGTATGTATGTGTATATATGTACTCACTTAAAATAT chr4 - 94230402 65232556 65232555 65232637 28997766 28997765 28997847 82 ATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGACTACA-GTCCTAGTTTAAATTAT ..x..........:..:::.:.xx.:xx...:.............x.x...........xx..:.-..x..x::.....x... 65M1D17M 60/82 73.2% 82/94230402 0.0% 1/82 1.2% -34899208 -59331194 +3163 chr4 + 190214555 30335577 30335576 30335662 86 GAAAAGAAAAGAAAAGAGAAAGAAAGGAGAGGAAGGGAAGGGGGGAGTGGAGGGGGGAGGGGAGGGGAAGGGAGGGGAGGGGAGGA chr4 - 94230402 40465776 40465775 40465861 53764542 53764541 53764627 86 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAA ..:...::.x..x....:x:.....:.:x..::.:.x......::.xx..x.x..:.:.:..::::..:.::...:.......::. 86M 52/86 60.5% 86/94230402 0.0% 0/86 0.0% -10130199 -84100203 +3176 chr4 + 190214555 30342910 30342909 30343017 108 ATAAATGTATCAAATAAATACAAATTTTCTGTTATAAAATATACTATATATACACGTATATATATATATATATATATATATATATTTAGTATATTGCAAAACTCAAGC chr4 - 94230402 52579729 52579728 52579830 41650573 41650572 41650674 102 ATGGCTACATCAAAAGAAGAAAA-----CTGCATTGAAATAACTCATA-AGATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAAAC ..::x.::......x:..x.x..-----...:xx.:.....xx::...-.x.:....:.:.:.:.:.................:....:.:x.x..:..::..x..:. 23M5D20M1D59M 68/102 66.7% 102/94230402 0.0% 6/102 5.9% -22236819 -71993583 +3156 chr4 + 190214555 30348294 30348293 30348366 73 AAAAACACTGTGATATATATATTTTATATATATATATATATATATATATATATATATATAAGTATATTGGAAG chr4 - 94230402 26616224 26616223 26616295 67614108 67614107 67614179 72 AAATATACTGATATGGA-ATATTTGATACATATATATATATGTATAAAGATAAAAATTTTAGTATTTTGGAAG ...x.:....xx..:x.-......x...:............:....x.x...x.x..x.x.....x....... 17M1D55M 56/72 77.8% 72/94230402 0.0% 1/72 1.4% 3732070 NA +3098 chr4 + 190214555 30386869 30386868 30386917 49 TTTCAGTAGGGTTGGTTTCTATTTTTTTTTTTTTTTTTTTTTTTTCAAA chr4 - 94230402 52115313 52115312 52115361 42115042 42115041 42115090 49 TTTTAACACGGTTGGTTCTTGTTTTTTTTTGTTTTTTTTTTTTTCTAAA ...:.::.x........::.:.........x.............::... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -21728444 -72501958 +3485 chr4 + 190214555 30412147 30412146 30412208 62 ACATTAATTATAGATTTCTTGTCAGGAGAGATGAATGCATGTCTAACAATGATGTAAGAGGG chr4 - 94230402 19980665 19980664 19980726 74249677 74249676 74249738 62 ACATTAATTATAGATTTCTTGTCAGTCAGGATTAATGTATGTCTAAGCACAGTATAAAAAAG .........................xx::...x....:........xx.:::.:...:.::. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 10431482 NA +3543 chr4 + 190214555 30468417 30468416 30468503 87 GGCATGTCAGAGGT-TTAACTTGGTCAATTATTTGAGAAATTAGATATCGAGGTTATTGTGATCAAGTGGCAAGCTGATTTTCAAATT chr4 - 94230402 19995048 19995047 19995135 74235268 74235267 74235355 88 GGTGTGTCAAAATTCTTGATTTGATTAATTGCATGAGAAATAAAGACTTCAGGGTTTTGTGATCAAGTGGTAAATTGGTTTTCTAGTT ..::.....:.:x.-..:.:...:.:....::x........x.::xx.:x...x.x..............:..::..:.....x.:.. 14M1I73M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 10473369 NA +17301 chr4 + 190214555 30478025 30478024 30478395 371 GAACAAGCAAAGGGAGCCCTGTCTAATGGAATGATTAAAAGTTGAAAATGTTATTTTAATTCAATCAATTAAAAGCATAAACAGCA-GGGTTTGATTGAATCAATTTAAAGAATTACACAGTAGTCAATGTGATTGTCAGCAGGAGTGAAATATTCATGTATCACCTACACACAGCTTGAAATCTGTATCCTTTAATTCGATATAACAAACAACATTTACCACATCACAGAAAGGTGACTTCTTTTGCGGAAGAAAGAACATTGCTATAC--TAGAGACATATGCTATTAGTGACAGCAAACACATCTGACATCCAGTTTGAAATATTTAACAAATACCATATCTTGGTTATGAATAATT--TTGTATCTTCTATA chr4 - 94230402 19998314 19998313 19998684 74231719 74231718 74232089 371 GAATAAGCAAACACAATTCTGTCTAATGGAATGATTAAGTGTTTAAAACGATGTTTTAATTCAATCAATTAAAAGTATAAACAGCATGAGTTTGATTGAGTCAGTTTAAAGAATTACACAGAAGCCAATGTGGTTGTCAGCAGGGGTGAAAAATTCATGTATCACCTACACACAGCTTGAATCTCGTATTTCTCAATTAGATATTACAAACAAC--CTACTCAATCACAGAAGGATAG---CTCTTCAGTAAGAAAAAACACAGCGAAGCTTTCAAAACATGTGCAGTTAATTAAAATTTAGGCACTCAGCAACCACTGTCAAACACTTAATAAGTATGACAGCTTGATTAGCCTTTATTTGTTCTGTCTTCCATA ...:.......x:x.:::....................:x...x....:.x.:......................:..........-.:..........:...:.................x..:.......:...........:......x.............................x:::....:::.:....x.....x.........--:...:xx.........:.:.::---..:..xx.x......:....:x..x.x:.--.x:.:....:...x:...:.x.x.::xx.x:..:::::..x...x.x.x...:.:....:..:..:x.:.x....:...xxxx.x...--..x.:.....:... 86M1I127M2D22M3D29M2I88M2I14M 275/366 75.1% 371/94230402 0.0% 10/366 2.7% 10479711 NA +3061 chr4 + 190214555 30479271 30479270 30479369 99 AGGAGATACATACATATACATAAACACACACACATATGTGCATATGTGTATATATATATGTGCATGTGTGTATATATATACACATTCACACCCACACAT chr4 - 94230402 89016079 89016078 89016175 5214228 5214227 5214324 97 AGGATGTGCACACATCTGCAT--GCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGAT ....x:.:..:....x.:...--:.........:.x..:...:.::::.::.x..::..:::.:.:x:...:.:.::.x....x.x.:...x...:x.. 21M2D76M 59/97 60.8% 97/94230402 0.0% 2/97 2.1% -58536808 -35693594 +3173 chr4 + 190214555 30479292 30479291 30479358 67 AAACACACACACATATGTGCATATGTGTATATATATATGTGCATGTGTGTATATATATACACATTCA chr4 - 94230402 23629626 23629625 23629692 70600711 70600710 70600777 67 AAAAACACACACCTGTGTGTGCATGTCTATATATGTATGTATAGGTGTACATGGACCTACGCACACA ...x........x.:....:::....x.......:.....::.x....::..:x.:x...:..:x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 6849666 NA +3099 chr4 + 190214555 30497204 30497203 30497258 55 ACACACATATATGTGTGTGTGTATACATATGTATATGTACACATGTATACTGTAT chr4 - 94230402 63997343 63997342 63997397 30233006 30233005 30233060 55 ATAAACATGTCTGTGTACATGCGCACACATGTATATGTATATGTGCATACTGTAT .:.x....:.x.....:::..:::...:...........:.::..:......... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -33500139 -60730263 +3356 chr4 + 190214555 30504997 30504996 30505060 64 AGTGTGATGTCTTAAGCTTTGTTTTTTGTTGTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTCTC chr4 - 94230402 61946744 61946743 61946807 32283596 32283595 32283659 64 AGTATTATGTCAAAGGGGTTGTTTTTTGTTTTTGGTTTTTTGTTTTGTTGTGTTGTTTTTTTCC ...:.x.....xx.:.xx............x...x..............x....x.x....::. 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% -31441747 -62788655 +3098 chr4 + 190214555 30573082 30573081 30573143 62 AAAGTTCTTTTTCTTTTGTTTCTTTTTGTTGTTGTTGTTGTTGTTGTTGTTTATACAATTTA chr4 - 94230402 65458189 65458188 65458250 28772153 28772152 28772214 62 AAGGTCTGTGTTTCGCTGTTGTTTTTTGTTGTTGTTGCTGTTGTTTTAGTTTAGTCAATTTA ..:..::x.x..::x:....x:...............:.......x.x.....xx....... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -34885107 -59345295 +3243 chr4 + 190214555 30696856 30696855 30696966 111 CATCCTGGGCAACACAGTGAAACGATGTCTCTACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------AAGACAATGGAGGTAAAGAAAAACA-------AATGAGAAATAGG chr4 - 94230402 34388181 34388180 34388316 59842087 59842086 59842222 136 CATTCTGGACAATGAATTGATTCTACATTTCTACATTTAAGGAAAAAAAAAAAACACAAAAAACAAAAACCAAACCTGGATCCAGTGGCTCAGAATTATGTAGTTAAAAATGAACATCGACATACTGAGAAATAGG ...:....:...::x.x...xx.x.::.:......xxx..::............x.x......x.....xx..------------------.::.:x...x..x....:.x:....-------.x........... 73M18I25M7I13M 79/111 71.2% 136/94230402 0.0% 25/111 22.5% -3691325 -90539077 +3190 chr4 + 190214555 30702709 30702708 30702783 75 ATATATGTATATATACATAAATGTATATATACTTGTATATACTATAAATATATATTAAATGTATATTATATCTAT chr4 - 94230402 50941877 50941876 50941951 43288452 43288451 43288526 75 ATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTTTATCTTTGT .......:.:.x.:.....x...:..x.....x........:.x.:....:...:xx.x.x..:x....x.:.:. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -20239168 -73991234 +14004 chr4 + 190214555 30715745 30715744 30716355 611 GATTTAAACAGCACAACTTATTCTATGTCTTGGCTAGAAACCAATTAAATAACCACTGATGCAAGCAGTTATTACCTGCTTAAAAGGAAATCTGTGGTTTCCTTATTTAAACTGATGAGTTTTAATGTCTATCAAAAAGGCTGTTATTGCAATGAATAATTTAGTCATTTCAGTCTACTAAACATGTTAATACTACA-AGCATGGATTT----AAGGCTGTAAAATATATCTAAAGTTTCTCAGAGTCTCAAGGATCAGAATCATACTTGGAATAGTTATGCACAGATATGTTTACTCTTTCAAGTAATAT-----------ATGTTTAAAGGACAATCGTTTGTAGTAATTATTTAGAAAAGGAAGACTGAAGTATCAAATTTAGC-GAAAGGGGTTAGAGAAATGGTTGATCATAAAGGCCTAGAAAACACGTCTACAGATAGAAGACCCTTTTTAAAAAGATGAAAGGTCAA--TGGATTTAGAGATATCCGAGTGTCATTTCCTCTGTTTGTCCCTTGGTGGAGTTCTTGAGTTACTTTCTCCTTTTCTGTCAAACTGTTTTTAT--CTTTCCA---------------------------------GAACTGGCTATCGTGTTTACTGTATTTAACCTTTTTCTCATATTATTGTGAATA chr4 - 94230402 20094264 20094263 20094812 74135591 74135590 74136139 549 GATTTAAACAACGTAACCAGTTCCACAT-TTAGCCAGCATTCAATTCAACCAGCACAGATGCA----GTTATTATCAGCTTAAAAGTAAATCTTCGGTTTCCTTATTTAAACACTTAAGTTTTAATGTCCATCAGTAAGGC------TGCAATGAATAATTTAATCATTTTTGTCCAC----------ACTGCTGCACAGTGAGAGTTTCTGCAAAGCTGTGAAAGGCACCGGG---------------CAAGTGTCAG--CCCTCCTTG---TAATTCTGCG-------ACCTCCGCGCTCAAACACTGCCGCCGACTCGGGAGCTCGGAGGG----------------------AGGGGAGGAAGGTGAAGGGATCA----CAGCAGAACTGCACCAGAGCAGCGG--------------------GACAC---------------------TTTAGTGAGATGAAAGGTCAACGCGGGCTTAGCGCTGTTGTGGTGTCATTTCCTCTGTTTGTCCCTTGGTGGAGTTCTTGAGTTACTTTCTCC-CTTCAGCCAAACGGTTTTAACTGCTTTCTATGGGGGTTTTGTCGTCGTTTTTCTCCCGCGTTCGAATTTGCTGTCATGTTTACTGTATTTAACCTTTTCCTCGTATTATTATGAATA ..........:.::...:x:...:.::.-..:..:..x.x:.....x..:x.x...x......----.......:.x.........x......x:.................xxx.:............:....:x.....------................:......:x...:..----------.x.:..:..-..::x.::...----..:.....:...x::.:.x::---------------....x:....--:.x.x....---..:..x...:-------:::.x.x.x:....::.x.::-----------:x.:.:::...:----------------------..:::......::x:.:.x....----:...-...xx.x:::....x.::..--------------------:....---------------------....:x:..............--:..::....x.x.:.:xx:...................................................-:...x.:.....x.....x.:--.....:.---------------------------------...:.x...:..:......................:...:.......:...... 28M1D34M4D74M6D31M10D9M1I11M4I21M15D10M2D9M3D10M7D21M11I12M22D23M4D4M1I20M20D5M21D21M2I70M1D21M2I7M33I54M 369/495 74.5% 549/94230402 0.0% 170/495 34.3% 10621481 NA +5402 chr4 + 190214555 30717339 30717338 30717667 329 CCCTACCCCGCCCATTTCCTTTG---CTTGCCCAGAACGGCGCTGCAGGG----CAAAGCCGCCGCCACTTCTTTGCTGCTCTGGCAGAAAGGTCGGAGCCTGGGACTGATGGGGGTGGGAGCAAAGCCAGCAGGCT--TCTTGGCCCCC-----GCAGTC-------------------TGTCCTCGCTGTTCTCCATGCAGCACACGTCGGACCCATTTCCCACGCTGGCTTGGCTCCGCCGCGAAGTTGGTAGGAATGAGAGTGAGGAGGGCGG---GCTGGAGAC--------------TTCCTCCCGCTCGCAAAGAGGAAACCACTCCACTGTGAAGGACGCGCTGCAACTCCCTAGTCATCCGGGAAGAAAT chr4 - 94230402 20095516 20095515 20095880 74134523 74134522 74134887 365 CCCTCCCCCGCCCGCAGCCGCTGGGACCGGCTCTCCGCGGGGCCGGGGGGGTGGCTGGGCTTCC-CTTCCCCCCCACTTCCCCAGCACGAAA--CGAAGCAGCGGGATGCGGGGGGAGGGGGGAAGGG-GGCAGGCCAGCCCTGGCCCCCTCCCGGCAGCCGCGACACGTGGAGCCGGAGCGACACTGCCATCCACCATGCAGTGCACGTCGGGCCCATTTCCCACGCC-GTTTGCCTGCCCTg-ggggaagaaaaggaggagggggaggaagggggaatgatggagaagaggggggGAGCCGTTACCTCTGCTCCGAAAGAGG-AACCAATCCACTGTGAAGGACGAGGC---ACTCCCGAG----CAGGAAAGACAT ....x........::xx..x:..---.:x..:.xxx:...x..:.x:...----.x::..:x..-.:x.::.::::..x.:.::...x:..:--..:...xxx..:x..xx.....x...:.x..:.x-:......:--:.:........-----....:.-------------------:.x.x::..::.:.x........::........:..............:-.:...x..x.x.:.-.::.xx.:x.:.:.x...:.x.....:..x..---.x......x--------------..x.::.:....xx.......-.....x................x.x:---......x..----.x..:....x.. 23M3I24M4I10M1D27M2D34M1D8M2I11M5I6M19I49M1D14M1D32M3I9M14I21M1D26M3D9M4D12M 212/315 67.3% 365/94230402 0.0% 64/315 20.3% 10621823 NA +9551 chr4 + 190214555 30717987 30717986 30718216 230 TCGGAGGTTTGGA---GAGAGGCAGGCGTTCCGATAAACCCGGGTT-CTTGCCAAATGTAAGAGGGATTTGGCTTTACTGCCACTTAGCCGGCCGCGAAGGCGCTGCGGAGCCCA--CCCCCGCCCCCGGCTCGAGACTGCGGCGGTGCGCACTGAGCCTGCGC---GCGGGGCTTTTCTCGCTGATGCTGCAGATACAGAGCTGAGAGGTTCGGGTGCCAGCAGCGGGAGGGTTAGCG chr4 - 94230402 20096403 20096402 20096637 74133766 74133765 74134000 235 TCGGAGCTCCAGAACAGCGAGG-GGGAATTTTGATAAATTCAAGTTGCTTGGCAAATATAATAGGGATTTGGTATTAATCCTACTTAACCCGCTGCGAAGATGCTGAGCTGCCGAGTCCCCCTCCTCCGGC-CGGGACTGCGGCTGTGAGCACTGAGCCTGCGCCGAGCCGCGC-TTTCTCGCTGATGCTGCAGATATAAAGCCGAGAATCTCCGGCATCTGCGG-GGGTGGGTTTGCG ......x.:::..---.x....-:..x:..::......::.::...-....x.....:...x..........:x...x.x.:.....:..x..:......::....x.xx...x.--.....x..:.....-..:.........x...x...............---..x.x..-......................:.:...:....:x:..x..:::.x..:.-...x.....x... 13M3I6M1D23M1I68M2I14M1D32M3I7M1D50M1D13M 174/226 77.0% 235/94230402 0.0% 13/226 5.8% 10621584 NA +5532 chr4 + 190214555 30718838 30718837 30719035 198 GACAGTCAAGGGACACAAAGTCAAAAGGAGAGATGGGAAAGCTGGGGACACTTTGGTACACAAAGTTG------------CCA--TTAAAGTTTATTTCCCTTTTATCCAGATAGGTGACGCTACACTTTGCCAGTTACTAAAGGCTGCAGGTTTCTGCTCAGAAAATAATATCGAGGTTTCCAACATGTGTTTATTCCCCAGGCGCGCACA chr4 - 94230402 20097857 20097856 20098062 74132341 74132340 74132546 206 GGCGATTAAATGGCACAAAGTCAAAAGGAGAAGCG----AACAGGACACGCAGGAATAAACAAAGTTGAATGGAGAGCTTCCACTTTAAAGTTTATTTCCCTCTCACCCAGGTAGGTGACGCTACGTTTTAGTAATCATCGAA-GTAGAAATTCTCTGTTC-GGAGATAAATTTGGGACGACTCATACATGCTTGCTCTCCTGACCCTCTCA .:.::.:..:x.:..................:::.----.:.x..:x..:.xxx::..x.........------------...--.................:.:.:....:.............::...:x:.:.:.:::..-.:x.x.:x.:....:..-.:.:....xx.:.:.::xx.:x.:.::..:..::..:..x.:.x.x.x.. 35M4D29M12I3M2I58M1D17M1D50M 126/192 65.6% 206/94230402 0.0% 20/192 10.4% 10620981 NA +204325 chr4 + 190214555 30719562 30719561 30724601 5040 GGAGCTGAGGCTGGGCTTTCCCGAGCGCGGCGGCTGGCTGACGCTCC--CTCCCGCCTCCTTATCCCGGGCCCTCCT------------------------CCCTCGCTCTCTCCTAGTGTGTAGTTTCGGCGGCTCGGCTGCTACTGCCGCCGCCGCTGCAGCAGCAGCGTCAGGGACAAGCCTGATCCGTGAGCGAGCGAGCACCCAGCAGCAACCACCACTTTGGGCAA-CTTGCGGGTTT-------------------------------CCTGCTCGCGGGTAGCGAACGGGAGATTCCCACTAGCGGTTCAGTGTCTCCGAGCCGCTGCAGCCCGAGGGGCGGCGGGAGCGCCCGCACCAGACTCTCCC---AGACGCGAAAAGGGACGAGACAACTGCGGAATTCACCAGCCGTGCCAGGGCACTTCCGAGGCCACAACCGACTGAC-ACTTTTTCTCCCCTTGGCAAACTGGATTTTTT----TTTTTAAGCTACTTGGCAGCTGTCTCTGACTCCACCTCCCCCTCCACCCCCGCCCGAAAGCCTTTGGCTTTTCTTCGGAAATCCAGACAGAATTGGGCATCTTTGTTAATTGCCGTTGGGGACGCCCGGCCGTGCGCTTTCGCC-------GGCTAACG------------TCGCCTGTGCTCCGAGCCTGGTTT----GCTCACCTTTGAACTGCAAAGGGATCAAGTTCAGCTTGAGTTCCCTGCATTGGGAAGGAGAGAGAGCGTGCAAGAGAGCGAGTGGGAGAGGGGGAAAGGGGAAAGGAGAGGAGGGAGGAGAGAGAGGAGGGAGGAGAGAGAAAGGGAGGGAGGGAGGGGAGGGATCGAGAGAGAGCGGGGAGAGAGAGGCTGCAATCTCCTCCCTGAATCGCGCACAGCGCTGCAGATCCC-ACTGCTCCGACA--TGCGGGCCGAATGCAGGTGAGAAAAGGCACGGACTCTGCGGCTGCGAACCCAAACTTGGGCACCGCACGGTGCGCACTGCTCAG-CCTTCGCCCCCGT-------GGGCGAAAGGCTGCTGCGGTTTCAGGCG-GCTGCTTCGTGACTAATGACCTTGCGCAGAGTTGTTAAGAAAAAAGAGAAACCCGCGCTCTCCGGGGTGAGAAGGGACTGA---CTCTGGGCG-TCTCTGAAGATGGCTCGGGCTTCTCTTTGGCGCGCCGGGGGGACCCTGACACTGACCGCTCTGTGACGCGAGTAGTCTCCCCTGCACCGTGCCCGAAGCGACGTGCCGGGGGATTTTTCATTCTCGATCTGTTGA--CTGGCTCCCCCGCTGCATGAGCAGAGTCGGAGTTGAGA----CTGGCTTGTTGCTGGCCCCAGCGCCTGGTGCAGGAAGCGACTCACGTTTGT---CTGGGTGGCCGGAGCCGGAGCAGAGCC-------TGGGTTTGGAGTGAGTGCCTG------------------------------GAACGTGAATTGGACTCAACTCGAGTAGCAGCAAAGACCAGCGGGCTGGCAGGCGGGGG----AGGCTGCAGGCTCATTCCCCACCTCTTCCCAGCCCCACTGCCCGTCTGCCGGAGCGGTTCTGGCCCCTTCCGACAGAG------CGGGGACTAGAGCCGGGGATTCTCCGCCCG-CTGAGGGGATGACTCTGGGTTGGGGGAGCGCCGAACCCGCGGCGCGCAGTGTCCCGTGAACTGTGAGTAC--TGCGACTGAACGGCGGCAGGCGAGCGGGCGATTAG-------------------CACCCATTGCATGAATTATGAAACAATAACTTTCGGAAGAAGCAGGAGGAAAAAAAGAAGCATCTATCGCTGCCCTCCCACCCCCATTCCCGGCCAACTCTCCACGCCGCTTTTGCCCCCTCCCTCCCCTCCCTCTCGCTCCTTCCTTTCCGGGAGAGGGGAGAGGACTCGGGGGAGGGCAGGCGGCCGGCCCCGGAGGAGGGGGGCGCCGAGGGGGCTGTGGTTAGAAGGAGCAGTAGCAGCAGCAGCAGGAGAAGATGCTGAGGATGCGGACCGCG---GGATGGGCGCGCGGCTGGTGCTTGGGCTGCTGCCTCCTCCTGCC------GCTCTCGCTCAGCCTGGCGGCCGCCAAGCAGCTCCTCCGGTACCGGCTGGCCGAGGAGGGCCCCGCCGACGTCCGCATCGGCAACGTGGCTTCAGACCTGGGCATCGTGACCGGATCGGGTGAGGTGACTTTCAGCCTGGAGTCCGGTTCCGAGTACCTGAAGATCGACAACCTCACTGGCGAGCTGAGCACGAGCGAGCGGCGCATCGACCGCGAGAAGCTGCCCCAGTGTCAGATGATCTTCGACGAGAACGAGTGCTTCCTGGACTTCGAGGTGTCGGTGATCGGGCCCTCGCAGAGCTGGGTGGACCTGTTTGAGGGTCAGGTCATCGTGCTTGACATCAACGACAACACGCCCACCTTCCCGTCGCCCGTGCTCACGCTCACGGTGGAGGAGAATCGGCCGGTGGGCACACTTTACCTGCTGCCCACAGCCACCGACCGCGACTTCGGCCGCAACGGCATCGAGCGCTACGAGCTGCTCCAGGAGCCCGGAGGCGGCGG----CAGCGGCGGCGAGAGCCGGCGCGCCGGGGCGGCCGACAGCGCCCCCTACCCCGGGGGCGGCGGGAACGGCGCGAGCGGCGGC-GGCTCGGGAGGC--------TCCAAGCGGCGGCTGGACGCATCAGAGGGCGGCGGCGGCACCAACCCCGGCGGCCGCAGCAGCGTGTTCGAGCTGCAGGTGGCGGACACCCCGGACGGCGAGAAGCAGCCGCAGCTGATCGTGAAGGGGGCGCTGGACCGCGAGCAGCGCGACTCCTACGAGCTGACCCTGCGAGTGCGCGACGGCGGCGACCCGCCTCGCTCCTCGCAGGCCATCCTACGGGTCCTCATCACCGACGTGAACGACAACAGCCCCCGCTTCGAGAAGAGCGTGTACGAGGCCGACTTGGCTGAGAACAGCGCCCCGGGGACCCCCATCCTGCAACTGCGCGCAGCCGACTTGGACGTGGGGGTCAACGGGCAGATCGAATACGTGTTCGGGGCGGCCACCGAGTCGGTGAGGCGGCTGCTGCGCCTTGACGAGACGTCCGGCTGGCTCAGCGTCCTGCACCGGATCGACCGCGAGGAGGTGAACCAGCTGCGCTTCACGGTCATGGCCCGCGACCGCGGGCAGCCCCCCAAGACCGACAAGGCCACCGTGGTCCTTAACATCAAAGACGAGAACGACAACGTGCCGTCCATTGAAATCCGCAAGATTGGGCGCATCCCCCTCAAGGACGGGGTGGCCAACGTGGCCGAGGACGTTCTGGTCGACACCCCCATCGCTCTGGTGCAGGTGTCCGACCGAGACCAAGGCGAGAACGGGGTGGTCACCTGCACCGTGGTGGGCGACGTGCCCTTCCAGCTCAAGCCAGCCAGCGACACCGAGGGCGA---CCAGAACAAGAAAAAGTACTTCTTGCACACCTCGACCCCTCTGGACTATGAGGCCACCCGGGAGTTCAACGTGGTCATCGTGGCGGTGGACTCAGGCAGCCCCAGCCTCTCGAGCAACAACTCCCTGATTGTCAAGGTGGGAGACACCAACGACAACCCGCCCATGTTCGGCCAGTCGGTGGTGGAGGTTTACTTCCCTGAGAACAACATCCCGGGCGAGAGGGTGGCCACGGTGCTGGCGACAGACGCAGACAGCGGTAAGAACGCCGAGATCGCCTACTCGCTGGA------------CTCCTCTG------TGATGGGGATCTTTGCCATCGATCCCGATTCTGGGGACATCCTGGTCAATACCGTGCTGGACCGCGAGCAGACTGACAGGTATGAGTTTAAAGTTAACGCCAAAGACAAAGGCATCCCCGTGCTGCAGGGCAGCACTACGGTGATTGTGCAGGTGGCTGATAAAAATGACAATGACCCTAAGTTTATGCAGGACGTCTTCACCTTTTATGTGAAAGAAAACTTGCAGCCCAACAGCCCTGTGGGGATGGTCACCGTGATGGATGCTGACAAGGGGCGGAATGCAGAGATGAGCCTGTACATAGAG----GAGAACA-----------ATAACATTTTTTCTATTGAAAATGACACGGGGACCATTTACTCCACAATGTCTTTTGACCGGGAACATCAGACCACATACACTTTCAGAGTCAAGGCTGTGGATGGGGGAGATCCTCCCAGATCTGCCACAGCTACAGTCTCGCTTTTTGTGATGGATGAAAATGACAATGCTCCCACAGTTACCCTTCCCAAAAACATTTCCTACACTTTACTGCCACCTTCGAGTAATGTCAGGACAGTAGTAGCTACAGTGTTGGCAACAGACAGTGATGATGGCATCAATGCAGACCTGAACTACAGCATTGTGGGAGGAAATCCCTTCAAGCTGTTTGAAATTGATCCCACTAGTGGTGTGGTTTCCTTAGTGGGAAAACTCACCCAAAAGCATTATGGCTTGCACAGGTTGGTGGTGCAAGTGAATGACAGTGGGCAGCCTTCCCAGTCCACCACGACTCTGGTGCACGTGTTTGTCAATGAAAGTGTTTCTAATGCAACTGCGATTGACTCCCAGATAGCTAGAAGTTTGCACATCCCACTCACCCAGGATATAGCTGGTGACCCAAGCTATGAAATTAGCAAACAGAGACTCAGTATTGTCATTGGCGTGGTTGCTGGCATTATGACGGTGATTCTAATCATCTTAATTGTAGTGATGGCAAGGTACTGCAGGTCCAAAAATAAAAATGGCTATGAAGCCGGCAAAAAAGATCACGAAGACTTTTTTACACCCCAACAGCATGACAAATCTAAAAAGCCTAAAAAGGACAAGAAAAACAAAAAATCTAAGCAGCCTCTCTACAGCAGCATTGTCACTGTGGAGGCTTCTAAGCCAAATGGACAGAGGTATGATAGTGTCAATGAGAAGCTGTCAGACAGCCCAAGCATGGGGCGATACAGGTCCGTTAATGGTGGGCCCGGCAGTCCTGACCTGGCAAGGCATTACAAATCTAGTTCCCCATTGCCTACTGTTCAGCTTCATCCCCAGTCACCAACTGCAGGAAAAAAACACCAGGCCGTACAAGATCTACCACCAGCCAACACATTTGTGGGAGCAGGAGACAACATTTCAATTGGATCAGATCACTGCTCTGAGTACAGCTGTCAAACCAATAACAAGTACAGCAAACAGGTAAG chr4 - 94230402 20098589 20098588 20103497 74126906 74126905 74131814 4909 GAGGGTAAGGCTGGGCTTGTG-GAGCGCAGCGCTTGGCTTGtcctcctcctccctcctcctcctcctcctccctcctTTTTGGctcgctctttctctctctctctctctctctctGTGCATGTAGAGCAGGCGGCTGTGCTGC------------------------AGCGTCAGGAAAGAGCT---------GCCGAGAGAGACTCCAGCAGCTCCCACCACTTTGGGCAAACTTGCCGGTTTAACAGCttttttttttttttttttttttttttttCCTTCCGAGTGG------GAAGCTCCTCAGTTGCCATTCAGCATTTTAAAGCACAAGCTGCTCT----GCCGTGAAAGCGCCCGAGCCACACTCCTCTGAAAGACAC-AGGAGGGAATACACAATCGCAGATTTCACCCGCCGTAGCGGTGCAGACCCCAGGAAACAACTGACTGATTGCATTTTATTC-----GCAAATAGAACTCCGTGTGGTTTTTTAATCGCGTCGCGGCTCTCTT------------CCCCTCC---------------CCTTTGCCATTCC---GCTTATATGGATGTAATTCAGAATCTGTGTTAATTCACGTGGGGGATCCAGTTACATCTCGTTTCGCTCCGGGTATGTTAACGAGAGACCAATAATCGCCTTTGGAC---ACATAGTTTTGTCGCTAACCTTTGAACTG--AAAGGATCGAGTTCAGCTCTGGTTACCTGCATTGGGACGG-------------------------------------------------GAAGGAGGAGGCgagagag-agagagcagagaga------------------------------------gggagagagagaCTGCAATCTCATTTGTGAATCGCGCTCAGTGCTGCAGCTCCAGATTGCTATAACACATGCAGTGCAAATGCAGGTAAGGCACA-CACACAAACTGCGGATGCGAAAACAAACTTGGG-ACTGTGGTGTGTGTG-TGCTCAGATCTACAGCCTTGCAAATTCCGGGCAAACGGCTTCTGCAGTTTCTGTCTCGTTGCTTTGTGACTAATGACCTTGCGCAGAGTTGGTAAAAAAAAA----------TCCTCTCCGG----AGAAAGAGCTGAACATTGTAGGCGATCTCTGAAGATGGATTTAGGTGCTTTTCTGCCAACCAAAGGGGATATTCCATGGACTGCTCTGTAACACACGGGGT-GCTTCTGCATTGTGCAGCTACCGACATTATTGGG-atttttttttctttatcttttaaaattattattaatatttttaaaGAACTGCCCATGTTAAGAGGATTTGGAGTTCTCCCGGACAC-GAGCCCGTTGAATAAAGCAAATCACATTTTTTTCCTGTGTGTGCAGATAGGGGAGAGAATAAATCTAATGCGTTTGTCGTGAACGACTgagagggcgagagagagagagagagaagagagagTGTGAATTGTAGTTAACTCCGGTGTCGAAGAAGACGACCTGG----------GGGGCTTCAGATCGCACGGTGCTGCTCCGGCTTTT---------ATTGCAAACCTTGCAAAGTGATTACAGTAAAATCaggaggaggaggagaagggggaggaggaggaAAATCCCATCCTATCTGCCGAGATGAATCT---------------TTAAAAAGCAAAATACACTGTCCCGTGAACTGTAAGTATATCGCAGCTGGGAGGCAG--GGCGAGCAGCGGAGGAGGCAGCAGCGGGGTTTTGCCCACCGATTGCACCAGCCATGAGGCGCTAAGTTTCCG--GGAGCAGAAGGAT-----------TCTATAATTGCTCGCTCGGCCGCTCTGTTGGC----TCATCAGGGCAGTTTATC-------------------------------------------------------GGGGAGTGC---------------GAGGAGGGGGG----GGGGGGGTCGGGA--------------------------AGAAGAAGATGAGGAAAATGCGGACTCTTTTCGGCTTTGTGCATTGCTGCTGCTGCTGCTTCTTGCTCCTCCTGCCTCCGCCGCTCCGGGTCAGCCTGGCAGCGGCCAAGCAGCTGCTGAGGTACCGGCTGGCCGAGGAGGGACCCGCCGACATCCGCATCGGCAACGTGGCCGCCGATCTGGGCATCGTGACGGGCTCCGGAGAGGTGACATTCAGCCTGGAATCAGGCTCCGACTACCTCAAGATCGATAACATGACCGGGGAGCTGAGCACCACCGAGCGGCGCATCGACCGCGAGAAGCTGCCGCAGTGCCAGATGATCTTCGACGAGAACGAGTGCTTCCTAGACTTCGAGGTGTCGGTCATCGGCCCCTCGCAAAGCTGGGTGGACCTCTTCGAGGGCCGGGTCATCATCCTGGACATCAACGACAACACCCCCACCTTCCCTTCTCCTGTCCTCACGCTCACCGTGGAGGAGAACCGGCCCGTGGGGACCCTCTACCTACTCCCCACCGCCACCGATAGGGATTTCGGCCGCAACGGCATCGAGCGCTACGAGCTGCTTCAGGAGCCcggcggggacgggggacggcg-cggcggcggcgggggcggcgggggcggcggcggcggc---------ggcggcggcgggggcggtgcg-gcggcggcCGGCCCGGAGAGCGCCCTCTACCCCAGCGGCAGCAAGCGGAGGCAGGAAGCGGAGGC-----------------CCGCAGCAGCGTGTTTGAGCTGCAGGTGGCCGACACCCTGGACGGGGAGAAGCAACCGCAGCTGATCGTCAAGGGGGCGCTAGACCGGGAGCAGCGGGACTCCTACGAACTGAGCCTGCGCGTGCGCGACGGCGGCGAGCCCGCGCGTTCCTCGCAGGCCATCTTGCGGGTGCTGATCACCGACGTGAACGACAACAGCCCCCGCTTCGAGAAGAGTGTCTACGAGGCCGACCTGGCGGAGAACAGCAGCCCCGGGACCCCTATCCTGCAGCTGCGAGCCGCTGACCTGGATGTAGGGGTGAACGGGCAAATCGAGTATGTCTTTGGGGCAGCCACTGAGTCAGTGAGGCGGCTGCTGCGGCTGGATGAGACCTCAGGCTGGCTTAGTGTCCTGCACCGCATTGACCGTGAGGAGGTTAACCAGCTGCGCTTCACCGTGATGGCCCGGGACCGTGGGCAGCCCCCTAAGACAGACAAGGCCACGGTGGTGCTGAACATCCGTGATGAGAATGACAATGTGCCCACCATCGATATCCGAAAGATTGGGCGCATCCCACTACGGGATGGAGTGGCCAGCGTGGCTGAGGACGTGCTGGTGGATACCCCCATTGCCCTGGTGCAGGTGTCAGACCGGGACCAAGGCGAAAATGGTGTGGTGACCTGCACTGTGGTGGGAGATGTGCCCTTTCAGCTCAAGCCAGCCAGTGAGGGTGAAGGGGAGCCACAGAACAAGCGCAAGTACTTCCTCCACACCTCAGCCCCTCTGGACTATGAGGCAGTGCGTGACTACAATGTGGTGATCGTAGCCGTGGACTCAGGCAGCCCTAGCTTGTCCAGCAACAACTCCTTGCTGGTGCGGGTCGCAGACACTAATGACAACCCTCCTGTGTTTGGCCAGGCTGTACTGGAGGTCTCTTTCCCAGAGAACAATCTGCCTGGTGAGAGGGTGGCCACGGTGGTGGCCACAGATGCGGACAGCGGCAAGAATGCTGAGCTCACCTACTCCCTGGAGCCCTCACCCCTCTCCTCGGAGTCACCGAGCGGCATCTTCAGCATTGACCCTGACTCTGGGGATGTGTCTGTGCAGGTGGTGCTGGACCGTGAGCAGCGTGACACCTATGAGTTCCAAGTGACGGCCCGAGACAAGGGGGTACCATCACTGCAGGGCTCCACCATGGTGGTGGTGCGGGTGGCGGATCGCAATGACAATGAACCGCGCTTCATGCAGGATGTGTTCACTTTCTATGTGAAGGAGAACCTGCAGCCCAACAGCCCCGTGGGCATGGTGACTGTGATGGACTTTGACAAGGGGCGCAATGCTGAGCTCAGCCTCTCCATACAGCCCAGTGAACATGACCAGGCAACTGGCATCTTCTCTATTGAAAATGACACAGGAACAATCTACTCCACAGTCTCATTTGACCGGGAGCAGCAGACCAGCTACACCTTCAAAGTGAAGGCTGTGGATGGGGGTGAGCCATCACGCTCAGCCACTGCTACTGTGTCCCTCTTCGTAATGGATGAAAATGACAACGCACCCACTGTCACCTTCCCCAGCAACAGCTCCTATACTGTGTTGCCACCCTCGAGCAACATGCGCACTGTAGTGGCCACAGTGGTGGCCACTGATGCTGACACCGGCCTCAACGCTGACCTCAACTACAGCATTGTTGGAGGAAACCCCTTCAAGCTCTTCGAGATTGATCCAGCCAGTGGTGTGGTGTCACTGGTGGGCAAGCTGGCTCCCAAGCACTATGGCCTGCACCGCCTTGTTGTACAAGTGAATGACAGTGGCCAGCCACCCCAGTCAACAACCACCCTGCTCCATGTCTTCGTCAATGAGAGCTTGTCCAATGCCACTGTGGTGGAGAGCCAGGTGGCACGCAGCCTCCACACACCCCTGGCCCAGGACATCGCTGGTGATCCCAGCTACGAGCTGAGCAAGCAGCGCCTCAGCATTGTCATCGGTGTGGTGGCTGGCATCATGACTGTCATCCTCCTCATCCTGGTGGTGGTCATGGCCCGCTACTGCCGCTCTAAGGGCAAGCATGGCTATGAGGCTGGCAAGAAGGACCATGAGGACTTCTTCACCCCACAGCAGCATGACAAGGCCAAGAAGCCCAAGAAGGACAAGAAAGGCAAAAAGGGCAAGCAGCCCCTCTACAGCAGCATTGTCACTGTTGAGGCTTCCAAGCCCAACGGGCAGCGCTATGACAGCGTGAATGAGAAGCTCTCGGACAGCCCGGGCATGGGTCGCTACCGTTCAGTCAACGGTGGCCCGGGCAGCCCCGACCTAGCCCGACATTACAAGTCGAGCTCACCACTGCCCACCGTGCAGCTGCACCCACAGTCCCCCACTGCTGGCAAAAAGCACCAGGCCGTGCAGGACCTGCCCCCGGCCAACACCTTCGTGGGCGCTGGTGACAACATCTCCATCGGTTCGGACCACTGCTCCGAGTACAGCTGCCAGGCCGGCAGCAAGTACAGCAAGCAGGTAAG .::.x.:...........x:x-......:...x:.....x::x....--.....x......:x...:xxx.......------------------------.:...x.......:xx.::.....xx:x.......xx.....------------------------.........:.x:...:---------:x....x...xx:........xx................-.....x.....-------------------------------::.x..:x..:..:.------.:..x.:.:..x.x..x:.....::.:.:x:...xxxx..x..:.x----..x.:.::........x:...x....::.:---....:.-.::.....xx.x....::..:..x......x.....:x.:.x...xx:..x...xx.....:......:-:.x....x.:.-----.....:x.:.:.::x.----.....x.::::.x.x..:...x...:------------.......---------------......x.x..:.---.xxx..x::..::x....x:.x....x........xx...x.....:x.xxxxx.:.x:xx......:-------x.:.....------------......x..xx.---:.x.:....----...x............--..:.....:.........:x:...x............x..-------------------------------------------------..:.::.....x.......-..:...x.......------------------------------------...........:..........x.::x..........x...:.......x...x-.:....x::...--...:.xx.:.........:..:x.x:-...:x.xx......x......xx..........-..:.::xx...:.::-.......-:..x.:x..::.:-------....:..x....x....:.....x.x.x-.:.....:..........................x...:......----------:x........----....:.::....---:.x.:....-.............x.:x:.x.x..:..:x..xx:..:::...:x:x.xx..:x...:.......:..:.:x.x:..-x.::.....::....xxxx.x....:.xx:x...-......:x....:x....x..:.--:.:x:x::xx:::.x:xx:..x.xx.:.x:x...:...----:...xx.x:.x.:..x.x.-.x...:.x..x.x:....:.x....:...x.---...x...xx.:..xxx..::x...::x-------..x.....xx....::.x...------------------------------..::........x.x.:.....x:..:x.::x:.....x.x.x..----------....----..:::...x.x.xx.x.:..:x..:..---------.:...xx::..xx.::..:.:..x::.:xxxx..x.:x:...------x:...:xx:...xx..::.x..:.xx..::-...xx.:.....x...---------------:x..xxx..::x:::..x...............:....:--:..::...::x...:.--.......:.xx..xx..-------------------....x......:x.:::....::.:x...x....x.--.:.....:....x-----------.....x::...:.x.:.:x..x.x:.x::...----..x:..x.x.:x...xx.-------------------------------------------------------......x..---------------...........----.:.....::.x.:--------------------------..:........xx..::........:x:x---..x.xx.:..::x....x....xxx...x..xx...........------....:x.x..........:..x...........x..xx......................x.........:...................:x.x..:..............x..x..x..x........x...........:..x..:.....x.....x........:...x.x..:..x...........x.x..............................x.....:................................:.................x.....x........:..............x..:.....:.:.......:.x..x.................x...........x..x..:..x...........x...........:.....x.....x..x..:.....:..x.....x........:x.x..:...................................:...........x..x.:...----.:...-.....:x:..x..x...x.....xx.x..:.:...x.---------..x.........::...:...-........-...:...:::..--------:..x......:..x:.xx.x:x...:::....x...-----------------...............:..............x.......:......x........:..............x...........:.....x........x...........:....x......x.................x..xx.x..:...............:.:.....x..x.........................................:..x............:....x.........:x...x........:........:.....x..x..:...:....:..:.....x........:.....:..:..x..:.....:.....:.....:.................x..x..:.....x..x........:..:...........x..:.....:........x.................x..x........x.....:...........:.....x...........x.....x..x......x:x..:.....:.....:.....xx....:..x.....x.................x..xx:...:..:.......:......:........x.....x..:........:..:..............x.....:...........:..:..x.....x........:........x..:........:.................:..x:x:..:..x..---x.........x:x.........:.x........::...................x::x..x..x.x...:.....x.....:..x.................:...:.x..x............:..x.x..xx:...x.x......:..:........x..::....:......x.x..:x.......:.x:.....x........:x.x..x..:..................x....x.....:..:........:.....:..:...x..:.......x.....------------......x.------:..xx..x.....::x...:..:..:..:........::.x::x..xx.x::x...........:......xx.....xx........:x....x.xx...x:......:..x:.x..xx::.........xx...:.:....:.x....:......x...x:x...........x..xx:x..:........:..x.....:..:........:..:...:................:.....x.....x..:........:x:............x.....x...x.x.....x.x....x..----.x.....-----------x.::...:..:.................:..:..x..:.........:.x..x...........:..x.......xx.....:....:...x.................x..x..x:.xx.x..x.....x.....x..x..x..:..:..:.................:..x.....x..:...:.:....:x....x:.....:...x.::.......:.....:..::.xx.x..x.....:..:......x....x..x..::x...::x:...x....:..x.....x..............x........:...........x..:..:........x:.:...........x..x:.:.....x..:..x:.:.xx.....:......:.....x.x:.x..x..:.................x.....x:.......x..x..x..:...x.x..:..x..:........:..:x.x..:.....x....:.:.x..xxx....:.:..xx.x..::.x....:x..x..x:.......:..x........:..x.....:..:x.x.....:...x.x.....:........:..:.....x........:.....x..x..:..xx.....:.::.x..:..x.....xx.x......x.x..:..::::..:x..........:..:.....:..:..:..:..:.....:..:..x..x..:...........:x.:..:.....:..:............::......:xx:........:.......................x........:.....x..:..:...x.x.....:..:..x...........x..:........::.......x..x...x.x..x..:..:.....x..x.....:..:.....:..xx.:........:..x..:..x...:....:..:..x.....x..:..x.....x..x.....x..x.....:...........:..:..:..:..x..:........x..:.....x..x..x........:..x..:..x..:..:........:...........:..::..:::.:............:........ 21M1D25M2I28M24I42M24D17M9D39M1I11M31I15M6D46M4D30M3I6M1D69M1I11M5D16M4I26M12D7M15D13M3D68M7I8M12I12M3D9M4I16M2D40M49D19M1D14M36D54M1I12M2I26M1D33M1D15M1D7M1I13M7I28M1I45M10D10M4D12M3I9M1I76M1D34M1D23M2I38M4I19M1D31M3I27M7I21M30I45M10D4M4I27M9D42M6I30M1I16M15D39M2I16M2D17M19I36M2D13M11D32M4D18M55D9M15D11M4D13M26D29M3I44M6I504M4I5M1D37M9D21M1D8M1I12M8I36M17D720M3I288M12I8M6I305M4I7M11I1135M 3524/4668 75.5% 4909/94230402 0.0% 613/4668 13.1% 10620973 NA +3219 chr4 + 190214555 30724537 30724536 30724599 63 ATTGGATCAGATCACTGCTCTGAGTACAGCTGTCAAACCAATAACAAGTACAGCAAACAGGTA chr4 - 94230402 20104253 20104252 20104315 74126088 74126087 74126150 63 ATCGGTTCGGACCACTGCTCCTTGATAAGCTGCCAGGCCGGCAGCAAGTACAGCAAGCAGGTA ..:..x..:..:........:xx.xxx.....:..::..:::.:............:...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 10620284 NA +3576 chr4 + 190214555 30728094 30728093 30728319 226 TGTTCTCTTTAGTGATCGAATTATGTTCAATA-------TATTCATTGTATACCTAGTGAAAAAATTTGGGAGAATTTTTTAATTGCTTCAATTTTGGAAGCAAATGGTTGACTTGCTGTCATCTATTAAGCAATAAGAAAACTAA----------ATGTCAATTCATTTGTGTGTGTGTGTGTGTGTATACATACATATGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398674 33398673 33398873 60831530 60831529 60831729 200 TATTCTGTTTA-----TGAATTATGT-CAATAGTGCCTTTAGTTATGGCATATGTTCTGAGAAAACTT-------TTTTTT------TTAAACATTCTAAGCTCATAGTTCAG--------ATCTTATGAGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACA----------------TATATACACAGAGAGAGAGAGACAGAGATAGA .:....x....-----:.........-.....-------..x.:..x.:...:x.xx...:....:..-------......------..x..:x..xx....xx..:...x.x--------....xx.:..x....x:x.x..xx:----------..:.x...x:....:x:x.....:.............:.----------------......:.:.............x.....x... 11M5D10M1D5M7I29M7D6M6D26M8D25M10I39M16D32M 135/183 73.8% 200/94230402 0.0% 60/183 32.8% -2670580 -91559822 +3217 chr4 + 190214555 30728236 30728235 30728286 51 TCAATTCATTTGTGTGTGTGTGTGTGTGTATACATACATATGTATATATAT chr4 - 94230402 9151843 9151842 9151893 85078510 85078509 85078560 51 TCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .....x.x...xx...................:...x....x.:....... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 21576393 NA +3232 chr4 + 190214555 30728258 30728257 30728331 74 TGTGTGTATACATACATATGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGCATATATAT chr4 - 94230402 33398810 33398809 33398880 60831523 60831522 60831593 71 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAG---ATAtgtat ...:.x..x.x:.:::::...:.:....:.:.......:.x.............x.....x..---....:... 63M3D8M 52/71 73.2% 71/94230402 0.0% 3/71 4.2% -2670552 -91559850 +3360 chr4 + 190214555 30728275 30728274 30728347 73 ATGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAG--------------AGCATATATATATATTCTTTAGTGGAA chr4 - 94230402 12340919 12340918 12341005 81889398 81889397 81889484 87 ATGTACATACATAAAAATATATGGAGAGAAAGAGAGCAAAAGAGAGGGATGATTAATATAAGTATACCTATATTTTCTTAACTAGAA .....:...:...x.x......:......:......x:.:......--------------..:...:x.....x.....x.x.:... 46M14I27M 57/73 78.1% 87/94230402 0.0% 14/73 19.2% 18387356 NA +3040 chr4 + 190214555 30752075 30752074 30752130 56 TTTCCACTCTTCCACGCTTCTTTACTTTGCTTTTCTTTATTACTTTTTTTCTTTCT chr4 - 94230402 35288163 35288162 35288218 58942185 58942184 58942240 56 TTCCCACCCTTCCATGCTCCTTTCCCTTCCTTTTCCTCACTTTTCTTTTTCCTGCT ..:....:......:...:....x.:..x......:.:.:.x:.:......:.x.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -4536088 -89694314 +9951 chr4 + 190214555 30754227 30754226 30754650 424 CTATTAGCCTCCACCATGACTCATTAGAAAATGTCCTGAAAAAAGTTTAGCTCTGTATCAGACAATATACAGATAATTCCCAAGTCATTTGTCAAGTGAAAAAGAAAAGAGGTTGTTATAATCAAGCAGCTCCAGGGACATGAGCAGAAGTGTATCACTTTATTATTTTCCCTTCTACCGAAAGCATGATATATTAATTTATTTTAGATTGTTTAGGGTCCAAGGTTTTCTATGCTTACAAAAGTTATGAATTAAAGGTCCTAAATTGTAAGTCCTTAATGTGAATTAAATTCACACCCAATACAGGAAATATTAGTTGGAAACAATAAATCTTGTCAGGCTCAAGGTACTTTTATTGCTG--TAAAAAAAATGAAGGTCACACAATAATACTATTCAGGGAAATAGGTAAGACATTCAAAGAGAT chr4 - 94230402 20132775 20132774 20133151 74097252 74097251 74097628 377 CTACTAGCTTTTCATATGGTTCATTAGAATGTGTCCTGAAATCACTTTTGCTTCATACAGGACAAACTTTTGTATATTTATAAGTCATGCCTCAAA-------------------------------------AGTGTTATGAGCACAAATTTATTATTTCATTCCTTTTCTTTTG---GAAAATATG---TAGTAATGTGTTTCAGATTGTTTGAAATCTGAGAGGTTTTCTACTTTCTAGAATTATGAGATAAAGGTACTAAAATACAATCTCTTAACAAGAATGGAACTCTAATGCAGTGTAGGACCTACTAGTCTTAAAGAATAAATCTTGGGAAACT-AGGGTATTTTT-----TGAATATGAAAGATGAAGGTTACATGACAAAACTGTTGTGCTAATTACGTAAGATTTTAAAAAGAAT ...:....:.::xx:...::.........x:..........xx.x...x...:::..:x:.....xx.x:x.xxx...:x:.......x:x....:-------------------------------------..x.x:.......x..:.x...:.:..:...x:...:.:..:x---....::...---..x....x.:...:.........::::..::..:xx..:.x.:...x.x.:.:......:x.......x.....x.::..x::.....::x....x:..:..xx.:x..:.::....xx..:....:xx...x...........xx.::..-.:....:....-----..--..x:...:........:...::.:..x...:..xx.xx..x..x......:x..x...:::.. 96M37D43M3D9M3D151M1D11M5D2M2I63M 246/375 65.6% 377/94230402 0.0% 51/375 13.6% 10621452 NA +15432 chr4 + 190214555 30776054 30776053 30776601 548 GGTCGTCTTTCATTGTCCCATT-TTCCTCTGGATTTGTTCTTTTAA--ATTTTATGACCTTTGGTGAATGCATTGAAGATAACATTTTGATTAT-----------------------ATGATTATTGTATGGAAAACTATACTGAACTAAGTCCAAG---------------TGTATC--TTTGGAAACTAATCAGAGGTGTACCACATTCATTGACTTAAACCAATCCATCATAGTCATCTTCTAATT--TATTTCCACATGTTCTTCCAAGTTCCCATTCTTGAATAAGACTCTGACCTGCAAAGAAGAATGGAATGTAGTCTATAAGTATGTTTGTTCTGTTTTCTAACAACATAAATATTTTGCTTAAGCAGATTTGCTAGGAAGTGACAACTTTGAAAAATTGGACATAGGATCTGCTGGAAGCATTTCAGTTCGAAGCAATCTAAATAGTGCAGAAGGG-GAAAATGAAATATCACCATGTTTTAGAGATGACAGTTTTGTCAAAGATTCCCTTTCACTCTTTGGCTTGAAACAAATGAAGTAAATCAAGTATATCTGTTCAAAGTATGCATGTGCACTCACTGAGGA chr4 - 94230402 20146841 20146840 20147394 74083009 74083008 74083562 554 GGTTATTTTACATTTTACTATTGTTCCAGTGAAGTGCTAGGTTTAATGATTTTATGACCTGGAATTGTTTATGTTAAAAGAACATTTTGATTATTGTTTGTTTGGGTTGTGTCGATTATGATTTTTGGACAGGAAAAAATC---AGCTCAGTCAAAGAAACAGCATGCTAATTCTAGCCATTTGGAAACTAATTGTGAGAGTGCCAGTTTTATGGATT-------------CATAGGAGTTCGCTGAATGCTACTTTCAGATTTT------AGTGT--GTGCTTGAATGCAAGTA-ATCCTGCAAAGAAGTATAGAA-GTAATTTTATATTATGTTT--TCTGTTTTCTAACACTTTG----TTTTACTTAAATAGATTTGCTAGGCAGTGACAGCTCTGAAAAATTAGATACAGTGGCTGGTGGAAGTATTTTAGTTCCAGACATTCTAAATAGTATAGAAAGGAGGAAATGAAGTATCACTGTATTTTAAAGATGGTAGTTTTGTCAAAGATTCCTATTCAGTCTTGAACTTAAAACAAACAGAGTAAATCAAATACATCT------AAAATGTATGT--ACTCATTGAAGA ...::.:..x....x.x.:...-....xx..:.x.xx.xxx.....--............xx::.x:x.xxxx.x..:.x..............-----------------------......x...x.::.:...xx..x---.:..x....x...---------------.x..x.--.............::x::.x..:...xx..:..x..:.-------------.....xx:.::x..:.x.--..:..:..x..x..------...x:--:.x.......:x:.x.x-:x............x..:...-...:.:.xxx.x.......--..............x:x.:----....:.....::............x.......:..:.........:..:.:..x:x...x......:....:.....x.::..x..........::....:..-.:.......:......::.:.....:.....::..................:x....x....x::...:.......:::..........:..:....------.:x...:....--.....:...:.. 22M1I23M2I46M23I24M3D13M15I6M2I38M13D18M2I14M6D5M2D17M1D21M1D19M2D19M4D103M1I97M6D11M2D12M 371/508 73.0% 554/94230402 0.0% 86/508 16.9% 10629213 NA +7078 chr4 + 190214555 30778177 30778176 30778407 231 TAACAAAAAGTGAGCAGAGAACAAAAAGCCAATTATTTGTAGCACATAAAATCCTTATGATAATTTGGTAGACTTTAATTAAACTAATACATCACGCTGCACTTATAATACAAAAGAGCAAAAGAGAAGCAAATAATCTTTTTTTTGTTCTGTTGAGAAAACCATATTGCCTTG--TAATCAAGCATTTTAAGACTTATGATCTATTTTGAAGTATAAGATTTTCAATGCTTT chr4 - 94230402 20150964 20150963 20151172 74079231 74079230 74079439 209 TAATAAAAAGCGAATAGAGAAGAAAAAGC-AATCATTTGCAGTG--TAAAATCCTTATGATAGCTTGGCAGACTTTAATTAAACCAACCAAGCACACTGTGCTCAT-------AAGAGCACTATG-----AAATAAGCTCTTATTTGTT------AGAAAAC---ACTGTTCTGCTCACTTAAAAAGGGCAAAAGTTGTAACTTGTTTAGAAGTATAGAGTTTATAATTCATT ...:......:..::......x.......-...:.....:..::--................::....:...............:..:xx.x...:...::..:..-------.......xx.x:-----......x..:..x......------.......---.:..:::..--:.x.:..:x.xxx:..:.x..:.:.::.:...x........:::...x:...x.x.. 29M1D14M2D60M7D12M5D19M6D7M3D9M2I57M 151/207 72.9% 209/94230402 0.0% 26/207 12.6% 10627213 NA +12964 chr4 + 190214555 30786611 30786610 30787364 754 TTAAAGAAGGAAA--GAATACTATCAGCCAAGATGTGCAGTCCAAGCTTTGGAACTAGGCTGGCAAAACCCTACTCACATCCCTGTAAAGCAGACATATATTTTTGTATTTTTTATAGGTGGATACAGTGCAGACCATGAACCCCTCTGGCCACATTGAGGAATCGTGTAAAATGAATGTATGTGCTCGTAAGTGAA--ATATATGCAGTG---TTCCAACTCAATA---TGTTGGATCCTAATAGACCTGGATTTGTCTTGTGTAAA----AAGAAATCGATTCCCAAGGGGCAGGATCACTAACTGATTAAAATGAAGCTTTGAGTTTGAAGAAAACAAAAAAGGCTTTAAAATAAGATCTCTGCAAAAAGGAATCAAAC-TGT-GCTTTTTAAACAAGTGAAAAAAATCAAGCTC------TCAATATGGAATAAAGGAG-----------GGATGTGAGAGAGGTTTTGCAATCTTATCAATTACT----GTGGGGAAACAGAATCAGATATCGCCATACTCAGGAGTA----TGAAAAGAAGAACAGGAAATTCTTTTTCTTCAGTTTGCACTTGAATGGACTCAAGCAAAGAGTGTGGATATGTATCTTGTTACTGTTTATAGTTAATAATGTGGAGATTAGTATATATGGGATTTCATTTGCCTTGTTTGAACTAA-----------TTGGATGCATTATATAGAAATCACCTGAGCC-----TGTGCTAGATCAACAAAGAAAATGGAAATGTATACCTCAGGATTGAAATCCGAGAAAATTAGACAATTCAATGCTATTTAA chr4 - 94230402 20159390 20159389 20160138 74070265 74070264 74071013 749 TTAAAGAGAGAAAAGGAATATTTTTACTCACAA-----AATCTATAAATCAGGAATACGTTAGCCAAACCCTACTCACATCCTGGTAA-GCAGACATAT--TTTTGTATTTTTTGTAGGTGGACACAGTACAGACTACGCAGCACCCTGACCACATTGAGGTATCATGTAAAATGAATGTATGTGCTTGTAAGTGAATTATTTATGAAAAGAAATTCCAACTCTAAGGACTGTTGGATCACAAAATAGAAGAACTCTCTTTATTCTTAGCTTAAGAAATCCATTCCCAGAGGGCAGGGTTACTGC-----------------------------AAAACAAACGGGACCTCAAAAACAAAGCTATTTAATAAACAAACAAACATATAAATCGTTAAAAAACAGAACAATAACAACAGCAGAACACCAAAACTGAAAGCAAGAGACACAAGCAGTGTATATCAGAAAGACTTGGTAAGC--AGAAATGATCATAAGTGAAGGAACAAGATCATATACCATCTAATTTAGGAGTACAAGTAGGATGAAAAACCTCACAATTTTCTGCTTTGTTCCATCTTTGAAAGGACTGAA-------------ATTTG-ATTAGATGATTGTTT-CAGTTAGTAACTAGTAGCCGAGCGTGAACAAGATTGAGTTTTAAGAATTTAAATCAAGGAAGTATTTTTGGGTTGCTGGAAAAACAAAAAAACAAAAACGATAATATGCTAGATAAACAAAGACAAT----ATACATATCTTGGAAATGGATATTTGGAAAATCATAC--TTTAAT--CATTTAA .......::....--.....:.x.:.x:..x:.-----.:..:.x:xx.::.:.x..x.:.:..x.................:x....-..........--.............:........:.....:.....:.:.x.x.x.:...:...........x...:.....................:.........--..x....x.:x.---.........x.x:---.........x:..x.x.xxx.:.:.:x::..:.x:xx.----........x.......::.......:.:...:x-----------------------------........x::.:.:.:....xx.:.x..x.x:..x..:x..x.....-.:.-:x.:x.....x..xx...x..x.x...xxx.------:...x.:x...x:x.:...-----------.x..:.x...:..::..x.:..x.--.xx...x.::----...::.:....::....x...:.::.xx.:.:.......----.:::.x...:...xxx.x.x.:..:.x...::x.::::x:.....x.....x..-------------..x..-..:xx:.x.:.....-:.....:...:xx.x..x:x..::.:x.:::....xx:...xxxxx:...:..::..-----------.x..x...xxx.x.x.x...xx.x.x:.:x.-----.:........x........x...----..::...:..::.:.x..:.xx::x:......:.x..--..:...--:...... 13M2I18M5D50M1D10M2D96M2I12M3I13M3I38M4I33M29D48M1I3M1I31M6I19M11I24M2D10M4I39M4I54M13D5M1D15M1D57M11I31M5I23M4D37M2D6M2D7M 461/692 66.6% 749/94230402 0.0% 119/692 17.2% 10627221 NA +3009 chr4 + 190214555 30790913 30790912 30790968 56 ACCTTGTCTCAAAAAAAACAAAACAAAACAAACAAACAAAAAACAATAAATAAATA chr4 - 94230402 73319730 73319729 73319785 20910618 20910617 20910673 56 ATCTTTTCTTTTGGAGAACAAAACAAAACAAACAAACAAAAAATCATATGCAAGTA .:...x...:xx::.:...........................:x...x::..:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -42528817 -51701585 +4077 chr4 + 190214555 30812799 30812798 30812961 163 TTTCTTGTTATTATAAAAGCTGTAGTGAAT-----AGTAGGTGAGCTTATGAATTTAATTTTT--CAGCTAAGTAAACATGCACATATTAAATTCTCTAACTGTCATAAATATAATCAGGCCTTTAATTAGAAAATGA---------------------------AGGCAACATAATTCTAAGCATTATGAAGATAT chr4 - 94230402 20181679 20181678 20181873 74048530 74048529 74048724 195 TTACTTGCTTTTATAAA--TTTTCATAGATTTCTAAGGAAATGAGTTATTTGATTTTTTTTTTTCCAATTTAGTAATCATTCCCATCCTAAATTCTCTAAGTGCTGTAAATTTAAATACAGTTTTGATTAGAAAATGAAAAATGATGTTCTATTTCCTGCATCTTAGGTAACTGCATTGTAAGCATTAAGGAAATGT ..x....:.x.......--:.x.x:.::..-----..x.::....:.xx.x:....xx.....--..::.x.....x...x.x...x:............x..:::.....x...x:.x:x:...:............---------------------------...:...xxx...x.........x.:.:..:. 17M2D11M5I28M2I73M27I32M 113/161 70.2% 195/94230402 0.0% 36/161 22.4% 10631120 NA +29759 chr4 + 190214555 30822752 30822751 30823625 874 AAGATCTTAAAACCTGGATATTATTCCTGGACTACCCCTCTGTTTTCTAAAGAACCCATTTGACTTTCAGTTTACTAGTGGTAACAGAAACCTTTAGAAATAGTGTGTAGAATTAATTCTCTTTTGAAAGCAACAGGATCCTTCTCATGCATTTTCCTTTTCTTCATTTGCAGCGTTTTGCGTTTTATATGTG------------AGTAAGAACGGGAAAAAAAGTAAGCATTAAATAGCAAAGATAAAAGCCTTAGAGCCCAGATGCAGAGGCAGTTGACAATACAGGCATCACCAG-AAATGAGCTTTGCAC-GGATATTCATCTAGTGAACAGTTTGGTTACTGTATGTGATATTTATAACACATTAAAACATGGAGATTG-------TCCTGTGCAAGCTTTTTGGCACCCTTTTGCTTCGCAGGGTTGATAACATGGTTGGCTTAACAACTTTCAGCTGGTAAAAATATGGAGGCATGATTTGGGTCTTCTGATTTATCTCCTTTTGTTGTTGTTGCTTTCTTCTTATCTCTTTCACTCCGATGCCTATGTCCTTTGGTATTTCTCATAGCTTGACATGTAGCGGTAATGGTTCTATTAGCTGTGGAAAATCTGCTGAGCTTGCTCTTCAAGGCAAGCATGTCGTCACCGGTACTTTT-TGCAGTT-CCTTATTAGTACGTGCCCTTTACTGACTCTGCAAGAGCCATCACCTAGAATTAAACATTTTCTGCTAGACCTGTCCTTACTCTGTGCAAAATGATTATAGTCCATTATGCCACCTCCTTGCTGACAGCCAGATACTGCTGAGATTACAATAAAGTCCCTGCAAATTCAAATATGATGCTACCTCGGCGTACAGGGGTCTTTGATAGCGAGAACCATTTGAAGAAA chr4 - 94230402 20188905 20188904 20189740 74040663 74040662 74041498 836 AAGATTTCATAGTTT---CAGTGTTTCTGGACAGATTCCCAGTTTTGGAAGGGAAGAAGCTGGGCAATACTTTGCCAGTGGTAACAGAAGCCTG-------AGTCTAGAAAATTAATTCTCTGT-AAAAGCATCTGGATGTTTTTCCTGCTTTGTAGTAATCTTCATTGGTAGTACTTTGTGCTTTACTTGTGGACTCTATCACAAGCTGAAATGGAAAAAAAAATAAA--------AGCAAAAGCAAACTTGCTA----CCATCAGCAGAAG------ACAACAGATGCCTTGGTGGGAAATGAGTTTTGAACTGAAAATTAATACAATGAATGGTAGAGCTACAACGTGTGGAATATAGAGTGAATTAAAAAGAGGAAATTGCTCTTTCTACTGAGCAAGCTTTTTGGCATATTTTTA-TTCATGCATTTCATAACACTGTTATCCTAACATTGTTCTGCCTGTAAA-------------------GCTTTTCCAA-------CCGTAATATGTGAGAGCTTTGTTTTT---CCCTTCACTGTGATGACTCTGTCCTTTGGTATTTTTCATAGCTTGACATGAGGCAGTAATGGTTCTATTAGCTGCACTGTATCTGCTGAGCTTGCTGTTTTCAGGGAACATGTCATCACCAGTGCCTTTCTGCTGTTTCCTTATTAGCATGTGCCCTTTACTGACTCTGCAGGAGCTATCACCTAGAATTAAATATTTTCTGCTAGACCTGTCCTTACTCTGTGCAAAATGATTATAATCCATTATGCCACCCTCTTGCTGACAGTCAGATACCACTGAGATTACAATAAAATTGTTCCATATTTAAATATGATACTAGCCTTATGAAC--TGACTATTGATAATAGGAAATGTTTGAAAAAA .....:.:.x.:::.---:.x.:..:......x:x::.:.x.....xx..:.:.xxx.x:..:x:xx:.x...:.:.............:...x-------...x.:x.:............x.-:......x.x....x:..:..x...x..x.xx.xx........x.:..:::....:.:....:x....------------..:x::..:..:.......:...:--------......:::...xx:x:..----...xxx.....:.------....:.x.x..x.::x::.-.......:....x..-.:.x...x..x:.:....::..xx:.:...x:::....:x..x..x.:::x.......x:x...:....-------.x...x...............:x:....:-...:::x:x..x......:x...:x.:.....x:x...x..:x.....-------------------.x.:...::.-------..x.xxxx...x:xx.....x..:..---:.:......x:....x..x...............:...............x:..:...................::xx:x................x..:xx:.x:.:......:.....:..:.:...-...x...-.........:.:.....................:....:................:...........................................:..............::...........:.......::................:.:x:.x..x...:.........:...x.::x::.x..--x.:::x......::::...x::......:... 15M3D76M7D23M1D68M12I24M8D19M4D13M6D19M1I15M1I69M7I29M1D48M19D10M7D26M3D129M1I7M1I191M2D32M 583/813 71.7% 836/94230402 0.0% 84/813 10.3% 10633847 NA +3057 chr4 + 190214555 30824120 30824119 30824179 60 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGCTTCCCTCATATAT chr4 - 94230402 17388732 17388731 17388791 76841612 76841611 76841671 60 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTAT .::.....xx...:...:.......:..:.::...:.::...:..:::.:......:... 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 13435388 NA +3152 chr4 + 190214555 30841333 30841332 30841406 74 ATTTCATCTTGATATAATGAGTTCAAGGAACTAAATTGTTTAGACA-TTAAAAAATTAAATATCTCTGCCATTCT chr4 - 94230402 24632022 24632021 24632095 69598308 69598307 69598381 74 ATTCCATTCTGATGGAAAAAATTCAAGGAAATAAATTGTTTAAATATTTTAATAACTAACCACCT-TGCTATTCT ...:...::....:x..x:.:.........x...........:.:.-..x..x..:...x:.:..-...:..... 46M1I18M1D9M 55/73 75.3% 74/94230402 0.0% 2/73 2.7% 6209311 NA +10299 chr4 + 190214555 30855443 30855442 30856055 613 GGGCACTGCTGCTGTTTGCGGCAAACTCATCCTTTCTTCCTGATGAGAAATCACTTTTATTGGACGTTATCCTTAATCACCAGTCAAATGAGCCTCTCTTGAAATCTGGCTTCTCTGTAACCTGCTGCTACCACATTTACTCTATTGGCATCAAACAGGGTCGTATATCAATGCAAGTT-AATTTCTTGAAATCTGTTAAAGAGGATGATCTTTTGCTCTGTAGCATGCAGATTATGTTGGTAAACTTAGTAATACATAGTAAT--ACATTGGAGTTAGCACAGGAATA-------GGGCAATTCTGTTCTTTTTCTTGTTGCAAAGCTAGGGGACAGGTAATTTATTATACACGTATTCACCCTGAATAGGTCAGAACCATGAAATTTAAGAATCCTTCATTGGAGGCTATCAAGTCATTGGGGAGATTAAATCTACATTGTACTTTAATCTGCCGGATGGCCATTGCCATCAGTAAAATGTCGGATCTGTCGGCATTGTTAATGTAAGGGGCACCGTCTGGGTAATCATCAACTGAATGCAGTGACAAGTAATTTTATTGAAGTACCAAGTAAGAACTTAACCCTCTTGATTTTTTTCCCTTGAACCCATTTTCTTACTTT chr4 - 94230402 20208439 20208438 20209025 74021378 74021377 74021964 587 GAGTGCTTGTGTTGTTCACAGCTAGC----ACTGTCCTCCTGAAGAATGGAGCCTTTAAATCTGCAATAGCTTTAATTACATGAAGAATAAATCCTTTCAGGAGGTTAGTTCATTTGTGTCTAGCAGCTAACGCACCT-TTATGAAGAAACCAAATGGGAGTATATAGTAATACACTTTTAATTGCTTTTAATCCTCTAAATAAAATGAGGTTTAGCTCCACAGTCTTTGGATTATATTGATAAACTTGGTTGTACATCAAAGTTAACTTCAAAG-----ACAGGAGTACTTTACAGACTAATCCTACTGCGTACAT------AAAGCAATGGGAAAGA-AATTTGTTAT----TTGTACTTCTTGA-----TCACAAGCAAGAAACTTCAGACTTTTTCAATTAAATGCATTAAGATACT------ATAAAATCTACACTGTGTTTGGCTCTGCTAGACAACCATTGTTTCCAATAAATTATTTTATCTGTCAGCATTATTAATGGTAGGTACATGGATCAGGTAATCAGCATCTGAAAGCAATGAT--GTAACATTACTTCAATGTAAACAAAAAATGTAGGGTTGTGGGTTTTTTT--ATTATACATATGCTTTTCCTTT .:.::..xx..:....::.:..x.:.----x..x..:......x..:x::xxx....x.x.xx:.:x..x.:.....:..xx.xx:...:.::.::.::x.:.:x:.:.:.:x.:...:x.:x..x....x.:..::.-:.x.:xx.:x.:....::..:x::....x:...:..xx..-....x...xx....:x:....x.::....xx...x....:::..:x.x::......:...:.......:..x:.....x:x.:.--..x.:::..-----......:..-------.:x:...:..::.x:x.x:x.------.....x.x....x..:-.....:....----x.:.x.x:.:...-----...x..x..x....:..x...x.::....x.x:.:xx:..:...x:.:.------..x.........:...::..x:x.....::..:::......::x:..:....x.:.:xx.......:.....:......xx...x:..:x.x:::........x..x.....x...:...:--....:x...:.xx.:.::x..xx..:..:x..:xx:.x.x.:.......--x..:x..x:..x:.:..x.... 26M4D108M1D40M1I84M2I9M5D9M7I21M6D16M1D10M4D13M5D49M6D121M2D49M2D22M 350/577 60.7% 587/94230402 0.0% 46/577 8.0% 10647004 NA +3335 chr4 + 190214555 30859515 30859514 30859593 79 CTGCAACCTCCACCTCCAAGATTTAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.x:.:..:.....x...x..x.x........::.:.........:.:....--..:x...... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 12662389 NA +3535 chr4 + 190214555 30882076 30882075 30882147 72 CTCCTCCTCCCCTGCTTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCGTTTCTCTCCCTCTTCCTCCCCCTC chr4 - 94230402 23891378 23891377 23891448 70338955 70338954 70339025 71 CTCTCCCCACCCCGCCACCCCCCCCACC-CCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCC ...::..:x...:..:x..:.....x..-.......:.:......:.......:..::.:..:.:..::.:. 28M1D43M 50/71 70.4% 71/94230402 0.0% 1/71 1.4% 6990698 NA +3112 chr4 + 190214555 30882078 30882077 30882146 69 CCTCCTCCCCTGCTTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCCGTTTCTCTCCCTCTTCCTCCCCCT chr4 - 94230402 77208611 77208610 77208679 17021724 17021723 17021792 69 CCTTCCTCACTGCCTCTTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTT ...:.::.x....:..:..:x.:...:........:.......x::.xxx::...:..::.:.....:. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% -46326533 -47903869 +3330 chr4 + 190214555 30891763 30891762 30891816 54 TTGTTTTTTTGTTTTTTTTTTTTCTCTGTTAAGAGTTAAACTGTACTCTCCAGG chr4 - 94230402 69172985 69172984 69173038 25057365 25057364 25057418 54 TTGTTTGTTTGTTTTTCTTTTTTTTTTGTGGAGATTTAAACAGTGCCCTTCAGG ......x.........:......:.:...x:...x......x..:.:..:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -38281222 -55949180 +3130 chr4 + 190214555 30894458 30894457 30894537 80 TTCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 53895398 53895397 53895477 40334926 40334925 40335005 80 TTCAGAAACAAAGAAGCTATAAAGTAATATCAGATACATATATGCAAATGTATATCTACACATACATACACAAATGCCCA .....:..x...:..:xx.x...:x..x.xx.:...:......::.x..:.....x..:...:...:.....x.::.x.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -23000940 -71229462 +3037 chr4 + 190214555 30894463 30894462 30894531 69 GAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACA chr4 - 94230402 70707578 70707577 70707639 23522764 23522763 23522825 62 GAAGAAAACAGAAAAACAGGAAAAGGAA-------TATATATATATATATACACACACACGTACTCTCA ...:....x.:.....x.::....::..-------................:.:......::..x.x.. 28M7D34M 48/62 77.4% 62/94230402 0.0% 7/62 11.3% -39813115 -54417287 +3139 chr4 + 190214555 30894466 30894465 30894535 70 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGA---------ATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::.---------..........................::..x.x.. 26M9D35M 49/61 80.3% 61/94230402 0.0% 9/61 14.8% -39813113 -54417289 +3116 chr4 + 190214555 30894469 30894468 30894534 66 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACAC chr4 - 94230402 84287653 84287652 84287718 9942685 9942684 9942750 66 AAAAAAATAGGAAAAATACAGTATGTGCATGTATACAAATATATCTATACATGCATACACACTTAC .......x.::.....x.x.:x..:.::..:....:.x......x......::..:......x:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -53393184 -40837218 +3017 chr4 + 190214555 30894474 30894473 30894512 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -38543265 -55687137 +3041 chr4 + 190214555 30894489 30894488 30894550 62 AAATATATATATATATATATATATATATACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964823 14964822 14964884 79265519 79265518 79265580 62 AAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......:.x.:::.:.::.:.::.:...::.:.:...xx........::............. 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% 15929666 NA +3125 chr4 + 190214555 30894489 30894488 30894545 57 AAATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395806 8395805 8395862 85834541 85834540 85834597 57 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:..:...x..:....:...::x..:.:xx.:.................x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 22498683 NA +3294 chr4 + 190214555 30894491 30894490 30894565 75 ATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.::...x.:..:...x..:...:::.::.x:...:xx.:.................x.....x..:x... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 22498695 NA +3135 chr4 + 190214555 30894492 30894491 30894562 71 TATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATAT chr4 - 94230402 8395795 8395794 8395865 85834538 85834537 85834608 71 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.:.::...x.:..:...x..:.:.:::.::.x:...:xx.:.................x.....x.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 22498697 NA +3143 chr4 + 190214555 30894492 30894491 30894563 72 TATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395799 8395798 8395870 85834533 85834532 85834604 72 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.::...x.:..:...x..:....::.::.x:...:xx.:.................x.....x.::x... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 22498693 NA +3214 chr4 + 190214555 30894492 30894491 30894561 70 TATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...x.:..:...x..:....:..::.x:...:xx.:.................x.....x.::x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 22498691 NA +3074 chr4 + 190214555 30894493 30894492 30894547 55 ATATATATATATATATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x..:....:...::x....:xx.:.................x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 22498685 NA +3233 chr4 + 190214555 30894493 30894492 30894551 59 ATATATATATATATATATATATATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...:.x:...:xx.:.................x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 22498689 NA +3316 chr4 + 190214555 30894496 30894495 30894621 126 TATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATATATACATATACACACACATATATACACACACACACATATATATATATATATATATGTTTT chr4 - 94230402 73121102 73121101 73121227 21109176 21109175 21109301 126 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTT .:.::..::....x:...:.:.:.:.....x.x:..::x::...:..::.:.x::....:x::....:.:x:..:.:.:.x.:.:::x:...x.x........:....x::.x..x.x:x.:.... 126M 70/126 55.6% 126/94230402 0.0% 0/126 0.0% -42226606 -52003796 +3493 chr4 + 190214555 30894504 30894503 30894633 130 TATATATATATATACACACACACACACACACACACACACACACACACACACA--CACATATATACATATACACACACATATATACACACACACACATATATATATATATATATATGTTTTGAGTTTATAAAT chr4 - 94230402 73121102 73121101 73121233 21109170 21109169 21109301 132 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGAT .:.::..::....x..:.....:.:.....x.x:..::x::...:..::.:.--:...::x:..:..:.:x::...:...x....:.x....x.x.:.:.:..:....x::.x..x.::.x.x...x:.:.. 52M2I78M 76/130 58.5% 132/94230402 0.0% 2/130 1.5% -42226598 -52003804 +3027 chr4 + 190214555 30894536 30894535 30894582 47 CACACACACACACACACACACACATATATACATATACACACACATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x.....:...::..::.:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -56478211 -37752191 +30781 chr4 + 190214555 30920061 30920060 30920549 489 TAGACCTTAATGTATGTAATTTATGTATTTTTTAAAATAAGATCATTTACAATCTTA-CATCGTAGTGACATTCAGAATCTTTTCTTTTGCAGCCATTTCGTAGAGTGACGTTTTCTGTTGTGAGTCAGCCTCAGGACCCACATCAGGGGTCACTGCAGAGTTGCTATGACAGCGGGCTGGAGGAGTCAGAAACACCAAGCAGTAAGAGTTCATCAGGGCCAAGACTGGGTGCGCTTCCACTCCCAGAGGACAACTATGAAAGGACCACGCCGGATGGCAGTGTTGGTGAGGCAGAGCATATGGAAAATGGTAGGGGCAAACACAACATCCACACACATAATCACGCTAGTGAGCCGTAATAAGTAGACTCGCGA-AGGTCAGTCTAAAACCAAAATA--------AAATAGCTGACATTAAAACCATTTTATTTTAAGTGATAAATATTTGCTAAAATACAGAAATGCCAAATAAAGGAACATAACTCTGTAGATAAA chr4 - 94230402 20232648 20232647 20233134 73997269 73997268 73997755 487 TAAATATTAGTTTGCTTAAGTCATAT---TTTGAGAATCAG-TTGTTCATAGACTGAACATTTCAGTGACATTCAGAATCTTTTCTCTTGCAGCCATTTCGTAGAGTGACGTTTTCTGTTGTGAGTCAGCCTCAGGACCCACATCAAGGGTCATTGCAGAGTTGCTATGACAGCGGTCTGGAGGAGTCAGAAACACCAAGCAGTAAGAGTTCATCAGGGCCAAGACTGGGTGCCCTTCCACTCCCAGAGGACAACTACGAAAGGACTACGCCGGATGGCAGTGTTGGTGAGGCAGAGCATATGGAAAATGGTAGGGGCAAACACAACATTCACACATATAATCTCACTAGCAAGTGATACTAAGTAGACTTTTGATAGGTCAGTCCaataaataaataaacacattaaatagttaaaattgtaattattttattttaaaGA--------TTGTTAAAATACAGATACACAAAATAATGGGACATAACACTACTAATAAA ..:.:x...:.x.::x...x.:..:.---...x.:...x..-.::..:.:.:x..x.-...:x:......................:...........................................................:......:......................x........................................................x.......................:........:..............................................................:......:......x.:....::..:x:..x..........:x:..-.........:..x.xxx.....--------......:.:.x...:x..::............:x:--------...:...........x.::.x......x..:.......x..::x:..... 26M3D12M1D15M1I317M1I22M8I35M8D50M 406/477 85.1% 487/94230402 0.0% 22/477 4.6% 10687413 NA +19707 chr4 + 190214555 30922683 30922682 30923261 579 AAGGGTCATGATAATGTAACGGATCT-----------TTCCTGATTTTGTATGTGACCAACACTTGAAAGTCAGAGTTTATATGACCATTTGTCATCTACTGGCTGTGATTCATGTTAGCCTTGATCTATAGGTAATGACAAAATGAGATGCGATG----CACTGTGGCTGATC--TAAATGTAGCAGTTGACCTTTGAGTAACAAATTTGTTGGGTCCGTGTTTTCA-GACTACTCATCT---AGCCAT--AAAGTGCAATTGTGTTGCTTAAATTCTGGTAATTTCATCTTCAGTATTAATGGATCATTCTGACATAAATAGAATTGGAATTGAAACCTGTCAAGTATTCATTTGTCACATTTAATTGGAATCCAGGTAATCTGTAGTTTTTTGCTTGGCTAGGTTTTAATCAGGATTTGTATTGGATTTTCATTTGGATTTTCCATTAAAATACCATTTTGGATGCTGTGCTAGTTCCTAATTATTATTACCTCAAACATTTTTC-TTGAATTTTAACCTATGTGAAACA---ATGCAGTTATCAGCAAGTGTTTGGGATTAACTTTCATTGTAAAGTTT-AGAAGATAATTTCTAGTGCAATA chr4 - 94230402 20235529 20235528 20236123 73994280 73994279 73994874 595 AAGGTTGTTGACAGTGTGCTGAATCCGGTGCTTTGGACTTCTGGATTTTTCTGT----CACATTTTAAAAACTAGATTTCCACAATGGCATGTCATCTGCCTCCAGAAATTTAT--TACCATTAATCCATAAATAATGACAGAACAGGATAGAATGAATGTACTTTTGTTACTTCATATATGTAGTATCTGACATTGGAGTGA-AAGTTTTCTGTGACTGGATTTTTAAGTCCACTTGTATTTGAGCTATTTGAAGCACAATTGTATTGGTCAAATTATGATAATGTAATCTTCAACATTAATGGATAATTGTGACAGAAATAGAACTGGAATTGAAATCTATCAAGTGCTCATTCATCACATTTAATTGAAATCTAGGTAAGATACAGTGTTTAGCTTGAATAAGTTTTAATCAGAATTTATACTGGATTTTCGTTCAGATTATCCATGGAAAAGGCACTTTGAAAGCTATCTTAGTTTTTAATTGTTAGTACTTCAGATATTTATCATTTAATTTCAGTTGGTATGAAAAAAAGATATCATTATAACTAGTTGTTTTGGG-----TTTCATTTTAAAATTTGAAAAGATAACTTTCAGTACAGTA ....x.xx...:.:...:x:.:...:-----------:.:...:x...x.x...----x...:..x...:x.x:::...x:.::.:x::x........:.:xx.x.x:...:..--..x.x..:...:...::........:..:::...:x:...----:...x.x.:.:x.:--..x......:.x:....x..x....:.-..:...x:..x.x.:.x:....:.-.x.:...::.x.---...:..--:...::.......:...x.:.....x..:....x.x.......::..........x...x.....x........:...........:..:......::.....::.............:....:......xx.::...x...x.....:x..:...........:....:..:.........:..::....x.....x:...x:x..:....:.x...:.x:.....::.....:...x...:...:.:....x..-..x.....:.:::x:.:.....x.---..::x:....x.x:.:x.....x..:-----.......x....:...-.:.......:..::...:..:.. 26M11I17M4D56M2D40M4I14M2I27M1D24M1I12M3I6M2I256M1I24M3I26M5D16M1I23M 396/567 69.8% 595/94230402 0.0% 40/567 7.1% 10687154 NA +3106 chr4 + 190214555 30955624 30955623 30955702 79 CTGCAACCTCCGCCTCATGGGTTCAAGGGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGATTACAGGCATTTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:x..........x.x...x.xx.x........:..x.........:.:....--.:.x:..... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 12758498 NA +4953 chr4 + 190214555 30960047 30960046 30960185 139 CAGAAATTATATAGATAGTTAGAAAAGGAGGGGAGGAAGGAAGGAAGGAAGGAAGAAAGGAAGGAGGGAAGGAAGGAAGG--AAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGAAAGATTT chr4 - 94230402 12186180 12186179 12186318 82044085 82044084 82044223 139 CAGGAAACAAAGAGGTAAGAAAATAAAGAaaggaagaggagaaatagaaagagaaggagaaagaaa--aagggaggaagGTAAAGGGAGGCAAAACAGAAGAGAAGAAATGCAGGAGGAAGGGAAAGGGGAAGAAAGATCT ...:..x:.x.x..:..:xx.:.x..:..::...:..:.::.::x..:...::.:::..:...:.:--....:.......--....:...x.::.x:....::.:...:x.x:.....:.....::.:...........:. 66M2D12M2I59M 88/137 64.2% 139/94230402 0.0% 4/137 2.9% 18773867 NA +3749 chr4 + 190214555 30968285 30968284 30968345 61 TTACTCTCTCTCTCTCTCTATATATATATATACACTATATATATATATACACACACTATAT chr4 - 94230402 71295515 71295514 71295575 22934828 22934827 22934888 61 TTAATCTCTCTCTCTCTCTATATGCACACACACACTATATATATATGTATGTATATAGTAT ...x...................::.:.:.:...............:..:::.:.:x:... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -40327230 -53903172 +3075 chr4 + 190214555 30968359 30968358 30968398 40 CTATATATATACACACACTATATATATATATATATATATA chr4 - 94230402 71295532 71295531 71295571 22934832 22934831 22934871 40 CTATATGCACACACACACTATATATATATGTATGTATATA ......::.:...................:...:...... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -40327173 -53903229 +3242 chr4 + 190214555 30974149 30974148 30974267 119 TTTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCCTTTCCTTTCCTTTCCTT chr4 - 94230402 45185594 45185593 45185709 49044694 49044693 49044809 116 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACT---CTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTT ....::....:..xx::.:xx......x:...x........:..::.::x.:::..x.:..::........:.xx..---:...::.....:x...xx.x.:.:..x:.x.:.x..:.. 77M3D39M 71/116 61.2% 116/94230402 0.0% 3/116 2.6% -14211445 -80018957 +3148 chr4 + 190214555 30974180 30974179 30974312 133 CTTTCTTTCTCTTTCTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCCTTTCCT-TTCCTTTCCTTTCCT-------TTCATAAATTTCTGTCT----TTGATTACTAAATG-TATTTCTTCT chr4 - 94230402 18988809 18988808 18988954 75241449 75241448 75241594 146 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATCATAATATTTAAAAGCCTCTGTCTACCCTTTGCTACCAATTGCTATTGTTTTT ...:x..x::.:..x.x...:x..::..:.xx.:..x.:.:..........:............x...x:xx.....-..:.:.x:..x:.x.-------..:.x..:::.......----..x::...:..x..-....x:..:. 77M1I15M7I17M4I14M1I10M 88/133 66.2% 146/94230402 0.0% 13/133 9.8% 11985371 NA +3252 chr4 + 190214555 30974194 30974193 30974253 60 CTCTTTCCCTCCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCCTTT chr4 - 94230402 31754629 31754628 31754688 62475715 62475714 62475774 60 CTTTCCCCACCCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTT ..:.::..x:......x.....:.........:..x...:::::.:..:...:....... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -780435 -93449967 +3228 chr4 + 190214555 30980349 30980348 30980412 64 TTTTTTTGTGTGTGTGTCTGTTTCTTGGTTTTTATTTTTTTGTTTTTGGTTTTGTTTTTGTGAA chr4 - 94230402 49193411 49193410 49193474 45036929 45036928 45036992 64 TTTTTTTGTGTGTGTGTGTATTTCTATGTTTTTTGGTTTTTGTTTTTTTTTTTATATATGAAAA .................x.:.....xx......xxx...........xx....:.x.x..x:.. 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% -18213062 -76017340 +9373 chr4 + 190214555 30983675 30983674 30983870 196 AAGTGGCCATAATCAGTATGCATTCCTTGTAGAA-TGGAAACATAAGTGACATTTTGAAATATTTTAATTGCATGTTCAGAAGTGCTAGTGGATATGCCAAAGTCAGAATAAGATCCTGAAACTAATTAATGTGGCTTCATTTATCAAGAGCACTAGAGCTGTTATAAATACTAATAATAGCATTGTAAGAGTATAT chr4 - 94230402 20269610 20269609 20269805 73960598 73960597 73960793 196 AAGTAACTGTAATCAGCATACATTCCATGTGGAACTGTTAACAAAGTTGACATTCTGAAATATGC-AATTTCATATTCAAAAGCGTTACTAGATTTGCTATAGCTGGAATAATATCATGAAACCAATTAATGTGACTTCATTTATCAAACATAGTAGAGTTGTTATAAACACCTCAAATAGAGTCATAATAGTAGAT ....::.::.......:..:......x...:...-..xx....x.:x.......:........x:-....x...:....:...:.:..x.:...x...:.x..:::......x...x......:..........:.............:x::.x.....:.........:..:xxx.....x:.::...x....x.. 34M1I30M1D131M 145/195 74.4% 196/94230402 0.0% 2/195 1.0% 10714065 NA +9518 chr4 + 190214555 30988424 30988423 30989544 1121 AAACAGAATTCTCAGTTTATGAGAAGCCCAACATTTTCCATATGCACTGTCATATTCCAT-TTTTTCTAATATTCATATTTCATTAGCATTTAGT---------ACACAGGCCTTGGATTGTTGAAACAAGAAATATAAATATATTCA---ATTTCTATATTTGTGAACTATT---TATCATTTAAGTTATCATCAAGGCCGAGTTAGTTTTGTTTA--AGACACTAAATCAATTTAAATCCC--------------------ACCTCTTTTACT-TTTGATATGCAAATATTTTTACTTTGATGTTGTAGCAATACAAATTGAAGTTTGCAACATGAACTGCTAATGCTAATTTGATTACTTTTGTATTAGTGTTTAGTGTTACAAAA-----------------ATAACAAGAGATTATTTTTTAAATGAAACTGGGAATGGAAGAACTC--TTTCTTTGCAGGCCCTGTGCAATGATGGTAGTATTAATGCATGTACATTAATGCCTGATGATTCTTATAGAACAATGAATGTGATTTTGAAGGCAAATCATTCAAG-----ATTTTT-----AGAAAAACTGACAGCTTGATTTCTCTTTTTTAATTG---AAAGTTCATCAAAAAGTCC-TCACCTTCCTTTTTAACAGGTCAGAGACTTCAAATCTACTTAAAATATTTGTTGTAGATGATTTAGACCACAA---------TTTATTTTTAGCATTA---AAAATGTTTTATGTGAAGACAAGGTGCCTGAATTGTGAA-----TGCAAAACTTTTTGGACAGAATCAAATCACAGTTTTTTTTTTCCAGAAACTTGTTTCTTAGATTATTTGATTTATTTGATAAAGTTGAAGAGATTTCTCATGATCTGTCACAAGAATGGTGTAAATATCTGAC---TGCAAAA--CAAGCTAAGATAGGTACTCCTAAAACCTGTTGAAAAACAATTTTTTCTC-TTTCTCTTTTTAAATAGTACTTATGAATGGTATCTCTCCAAATATATACAT----------------------------CTCACTAGTACATATAGCTA--------------TATAATCTGTAAGATATCC--CAGTGATGGAGCTGCAGTAATATCGGCCACCTGTAGTGTGCCTGCAGC-GTGCATGTTGCTTGTCTGTTTCTTG---ATGAAATGTCTG--TGTAGTGTCTGTAA---TTTGCATTATGCCTGAAAGTCTCTATGCTCATTAACCTTTTACAGGTGCCGC chr4 - 94230402 20270829 20270828 20271973 73958430 73958429 73959574 1145 AAACAAAGTTCCTATGAAAAAGGAAACCTAACATTTTCCATATGCACTGTCATATTCCATCCCTTTCTAATATTCATGTTTCATTAACATTCAGTGTTGGATGAATACAGGCTCAAGA------ATACAAAAAAATAAAACAAACTCAAGTATTTCTTGCTTGGTTTGATATTTTCTATCTCTACAATATTTACTCAGAATAAGCCATCTTGTTTTATGGGGAACAAAAAAAGTATAAATTCTGAGGGAAATAATCAAAATTGATTCATTATACTATTGGATAT-TAAATTGCCTCATTAGCATACCACATTGGTA-AGGCTGAGATTTGCAACACTAAACCCTACCACAGCTTTGATAATTTCAATGCTAGAACTTAGTGTTGGGAAATCCTACTGTCGGCGTTGGAAGTTAAAGA-----TATCAAACAAGACTGGGAATGGAAGACCTCAGTTTGCCTGCAGGCTATCTACAGCAATGGTAGTGTTAATGCATGCTTTTCTGTGCT----------------------------ACCCAAAAGCTAGCTCAGTCAAGTTGCTATCTTTTCCAGAGAAAATTTTGCAGAATG-----------TTAAATGTGTAAGATGTCTTAAGAAATCAGTCATTGTTCTAT---ATGTGTCTG----------TATACACAAAA------------GGAAGTTATACTACAAAACTGTTTTTCTGTTTTTAACTGTACCTGTAATGCTTTGAGTGA----AATGTTCATTAATTTAAAACATTTTGTAATGTTTGGTAGACAGAA-------------------TTTCTGTAAATGGCTTTATATAC------GTTTACTTCACAATTTTTCATTAATTTTAC--------TAATACAACTCACATGAAAATCTAGCAATTGTAAAAACAAAACACAGCTAAGTACTTTAGAAG--TACTGAGCAATAAATTCTTAACATTTCACCACTGCAATAAGCAGAATATTTAGTAACTATCTAATGGCGTAGTTTATTTTCCTTTATGATTAGGAATTTTGGTTTATTAGAATGTTCAATTAGTAATAAGTCAATTTATTATGTGCATAATGCTCATTAGTCAT--AGCTGC----ATACCTACCACCTGTAGTGTGCCTGCAGCAGTGCATGTT--CTTTCTGTTTTATATACAAGTACTGTATGTTTGTAGTGTCTACAACTTTCTGTAATAAACCTGTAAGTGTATGTGCTAACTAACCTTCTGCAGGTGCTGC .....:.:...::.xxxx.x::...:..:...............................-::..............:........:....:...---------.:......::x:..------.x....:...xxx...:.x.:...---......xxx..x..xx:x....---....x:.xx.:.xx.:.::x..:x::..::.x:..xx....--:.:x..x...xx.:.x.....:.:--------------------.:::x..x....-..x.....-:....xx::.:.:.xxx..:::::.x:::..-.:::...::.........:x..x:x...x::.x:x......x.:..:x:.::...x::........:x:...-----------------:x.::x.:...-----.x.:...::.:...............x...--...x::.......:x.x.:..:::........:..........:x:x.:x:...:----------------------------.:::x:...x:.:x...x.....-----..:...-----......x:.x:...xx..-----------....x..---..::.x:x.:..:..:..x-...::x.:..x.---.::x...x.----------.x...x:....------------:x:.x...x..:....---------.:.:......:.xx..---:x....:...:x....----..x..x.x.x....xx:..-----..:..x::..xx.:.......-------------------..:.x.x..x.x.:..:x..x.:------:....:..x.:..xx..xx.xx:....:x.--------.x.:.x:.x.x:::.:..x....::.---..:....--x..:.xx..x..:.....::x:..:--.::...:x..:..x..:..xx.-....x.:x:.xx....:xxxxx..:xx.:...x..x..:..xx:::..xx.----------------------------:.:.:...x.::.x:.::..--------------...x..x..:.x:..:::.--:...x..--......----...:.x:......................-.........--:.x.......:x.:---.x.x.x...x..--..........::..---.:..:.x..x:....x....x.x.:....x.:.......:.:.......:.. 60M1I34M9I14M6D24M3I22M3I41M2I24M20I12M1I8M1D31M1D72M17I11M5D30M2I55M28D23M5I6M5I18M11D7M3I19M1I12M3D9M10D11M12D16M9I16M3I16M4D19M5I21M19D23M6D30M8D26M3I7M2I25M2D22M1I51M28I20M14I19M2I7M2D6M4D29M1I9M2D14M3I12M2I14M3I52M 642/997 64.4% 1145/94230402 0.0% 272/997 27.3% 10717595 NA +3052 chr4 + 190214555 31013585 31013584 31013647 63 TATTTTATACACACACACACACACACACACACACATATATCTGCACATACTGTTTCTCTGGGA chr4 - 94230402 27967116 27967115 27967178 66263225 66263224 66263287 63 TATTTTATATATACACATACATACACGCACACACGTATTTTGTCAGATAGTCTTTTAATAGGA .........:.:.....:...:....:.......:...x.:xx..x...x.x...:xx.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 3046469 NA +6769 chr4 + 190214555 31030594 31030593 31030821 228 AGTAGAAAAAAAGACTG---AAAGTTTTAGTGAATTTCAATTACTTATGGCTTAGCAGCAGTAACTGAAGAGCTAATTTGTTTAGTAATGAACTTTATCTG----CAAAAGAAAAGACAAGACAG--CTACTGAATTCAACAACAATGACTTACTCTCCAGTTTCAAGCAAAAAAAGACAATAGAACTTGTCTATACCATTCTTCAGATTGGTGAACATTAATCATGTTTTGCTTTT chr4 - 94230402 20310030 20310029 20310265 73920138 73920137 73920373 236 AGCAGAAAAAATGCTTGGGAACAGTTCTGCTGA-TTCCAATTATTTATGGCTTAGCATCAGTAACTTAGAAGCTAAGGTGTCCAGTAATTAACTCTCTCTGTTGCTGAAATAGATAACAAAATGGTATTACAATATTCAACAGCAGCTACTTGTTTCAGTGTTTAAGGAAGTTGCTGTAAACAGTGTTCTTCTCCAGCATTATTTAGACTGATGAATATTAAATGTGGCTTGATCTT ..:........x.x:..---.x....:.:x...-..:......:.............x........x.::......xx...::......x....:.x....----::...x.:.x:....:.::.--:...x:x........:..::x....::.::xxx....x.:.x.:xx:xx.xx..:..x::.:x...x:.x....x..:...:..:....:.....x::..x:...x.:.. 17M3I13M1D67M4I20M2I110M 150/227 66.1% 236/94230402 0.0% 10/227 4.4% 10720564 NA +5558 chr4 + 190214555 31041321 31041320 31041525 205 ATATTTTAGTAATACATTGGCTTAATTTTCAAATACT----GGCATTTTATTTTTATTCACCTTGCTTTCTTCTACTTGGTGTATTTTAAAGAGCATGCTCCTTGCTTAGCATGATGAAATGCAGTCACTGCTAATTATCATGGCTGCAATTTTCAACTTCACAAGTGAAAATCAAACCACAGACTCCTAAGTGCTGGAAGTCATGCAA chr4 - 94230402 20313987 20313986 20314184 73916219 73916218 73916416 198 ATAGTGTAGTAATGTACTG-----ATGCCAGAACACTTCTCGGTATTTC----TTCCCCTCCTTCCAGGTTTCTATTTCA-GCAATATAAGGAGCATAGTCAT-GCTTAGCATGTCAAAATCCAGTCACTGCTAATTACTGTGGTTGCAAATCCTAACTTGATAAGTGAATATCAAACCACCTTCTTTGATGTGATGTAGTCTACACAA ...x.x.......::.:..-----..x::x:..:...----..:....:----..x::.x....x.xxx:.....:..x:-.:.x.x...:......:x..x.-..........x::....x................:::...:.....x.:::.....x.:.......x..........xxx..::x.x...x..x.:x::.::... 19M5D13M4I8M4D27M1D22M1D105M 132/194 68.0% 198/94230402 0.0% 15/194 7.7% 10727334 NA +13547 chr4 + 190214555 31048445 31048444 31048907 463 TTATTTTTAGTCTTCAGGCTTGATGCCAGTTAGAATCTTTCCATGTCAGTAGAATTCAGGACTAATTTGCTGTGATTAGCAAAGAATTACTTTG-CAGGCTTTCTATTCATTTATGCAAGGACAGACCTGTTAATTCCAACTCACTGAATTTATATGGGATG----------CCCACAAAAGTCCTTGGAAGCCTCAAGCTTTTACTACAAATAGTTGATTT---TTCCATATGCCAGATACTCAGCTTTTCAGGAGAAAGCATCCCACTAGTACTGTTGAAAAGAGAGAGAGAGAAAAAAAAAAGGCAAAGCTTAATTCTGTAAGTAAGGTTGCTATTGCCACTCAGCAAAGGAAATCGCACTTAACCCACTGCAGTGTAAGCTCTTCTTCCAAACAATCTGGAAAGAACATTATATGAAAATGTTGTCATAGCAGAGCT------------CCACAATGTAAAAGGACAAATTGCCCTTTGAGAATA chr4 - 94230402 20316953 20316952 20317412 73912991 73912990 73913450 460 TTAATACTACTCCTCAGGATTGATGCCAGTAAGAATCATTCTATGTCGCTGGACTTCAAGACTAATTTGGTAAGATTATCTGGAAATTACTTGGCCAGACTTCCTGTTCACTATTGCAAAGACAGACCTGTTAATTCCAACTCATTTACTTTATATGGAATGAAAGATGAATTCAACGGAAGTGGTTATAAGCCTCAAGCTTTTACTAGTAACAGTTGATATGGATTATACATACTGTACAC--------ATAGGATAAAGCATCACAGCTATGCTTTAAAAATGTCAG-------------------AATGCTTAATTCATCAAACAAGGGCATTACTGCACTTCACCAAAGGAGAT-GCATATAGCGAAGTGCACACTGAGATTTTCAGCCAAAAGATGCTACAGAAACATTAAATCAGAAGATTGACTTAA-AGAGGTATCTTCTAGTGACATCAATGCCAAAGGATAGCATGCTTCCTTAGAATA ...x.x:..x..:.....x...........x......x...:.....:x.:..x....:..........x.:x.....x.x:::........x.-...:...:..:....:.xx.....:........................:.x.x.........:...----------:.x..::....xx..:x...................xx..:.......x.---..x:.:..:.::x.:..--------x:....x........x..x:x:.:..x.x:...x.xx..-------------------..x.........xx:..::....x:::..:...xx:...x.......:..-...:x..:.xx.x....xxx.:..x.:...xx.....x:..x:x:x.::.......x..x.:..x:...x.x..:-....x.------------.xx.....:x......:.:xx...::::.x...... 94M1I67M10I50M3I17M8D39M19D50M1D75M1D6M12I36M 304/434 70.0% 460/94230402 0.0% 55/434 12.7% 10731492 NA +3355 chr4 + 190214555 31056366 31056365 31056440 75 AGGAAAGGAAGAAAGAAAGAAGGAAAGAAGGAAAGGAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAAAGAAAGAA chr4 - 94230402 2046809 2046808 2046883 92183520 92183519 92183594 75 AGGAAGCAGAGCGAGAAGAACGGAGAAAACTTGAGTCAAAGAGAGAGGAGGAAAGGAGGAAAGAAGAGGAAAGAA .....:x::..x:....::.x...:.:..xxx:..xx.:.:...:..:.......:.........:.:....... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 29009557 NA +3018 chr4 + 190214555 31056369 31056368 31056448 80 AAAGGAAGAAAGAAAGAAGGAAAGAAGGAAAGGAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAAAGAAAGAAGGAAAGAA chr4 - 94230402 27809316 27809315 27809395 66421008 66421007 66421087 80 AAACCAGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTAGAAATATGCCAGGAA ...xx.:..:.:.::.:.:..x:...:x...:.......x...:.:.:...........:.xxx.....x.x.xx.:... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 3247053 NA +3676 chr4 + 190214555 31056389 31056388 31056536 148 AAAGAAGGAAAGGAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAAA----GAAAGAAGGAAAGAAA-GAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGGAAGGGAAGGGAAGGAA chr4 - 94230402 29503819 29503818 29503975 64726428 64726427 64726584 157 AAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAA ...::...:......:.:.........x:.::.......:.....----:x..:.:.:.:.....-.:..x.x.:.x..x.:x...x.::..:.x.xxx..:.----:..:..x.:..x..::..xx.::...xxx..:.x..:...x.:::.:... 45M4I16M1I37M4I50M 93/148 62.8% 157/94230402 0.0% 9/148 6.1% 1552570 NA +3142 chr4 + 190214555 31056468 31056467 31056549 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGGAAGGGAAGGGAAGGAAGGAGAGAGGGAGA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:....:::.:...:x...:.x:...:.:.:.:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% -5801826 -88428576 +3050 chr4 + 190214555 31056540 31056539 31056597 58 GAGAGGGAGAGAGAGAGAGGAAGGGAAGGGAAGAGAGGAAGGGAAGGGAGGAAGGAAG chr4 - 94230402 4471675 4471674 4471732 89758671 89758670 89758728 58 GAAATAAAATGAGGAGGAGGGAGGGAAGGGAGCAGAGGAAGGAGTGGGAAGAAGAAAG ..:.x::.:x...:::....:..........:x.........::x....:....:... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 26584865 NA +3481 chr4 + 190214555 31056647 31056646 31056753 107 AGAAAGAG---AGAGAGGAGAGAGAGAAAGAGAAAGAGAGAG------GAGAGAGACAGCAAGAGAGAAAGAGAAAAAGGAAGGGAAAGAAAGAGAAACGAAAGCAAAGAAAAGAA chr4 - 94230402 53664667 53664666 53664782 40565621 40565620 40565736 116 AGATAGAGCACAAAGAGCAGCTGGAGCAAGAGAGAGGGAGTGTTTGTTGTAAGAGAAAGCAAGAGAGTAAAACAAAAGAAAGGCCGAAGGAGAAAGACCAAAGACAGAGGAAAAAA ...x....---.:....x..xx:...x......:..:...x.------.x:.....x..........x..:.x....:::.:.xx:...:.::.::.x.:..::..:..:...:.. 8M3I31M6I68M 72/107 67.3% 116/94230402 0.0% 9/107 8.4% -22608020 -71622382 +8091 chr4 + 190214555 31062412 31062411 31062747 336 GTTTTCTTGTTCATTTAAA-----ATATCTAAT--------TTCCTTTATTTTGGCATACTTCTTATCATTT---AGACATCAAAAACAGGCCTGAAATGCAAAAATTAATAATCAGAAGGATACGAGAGCCAAACCCTTCTGAGT----TGTAGAGGTGCCTGCCTCTCAGTGCCAAATCAACAACTGATT-TCATAAACTTAGTCTTCATGTTATGAACTCTACTGCCAATGAAAATCAATAAAAACAATTTCCTTCTGCATTCATGATCCTCTCCTCACACTCTTTCTTCA-TATTCTTTTCAGGGT-CATTTTGTCAAAATGCCACAGGG-CCATACAAAATGTAATTTTGTGTTT chr4 - 94230402 20322236 20322235 20322580 73907823 73907822 73908167 345 GTTTTCCTATTCATTTCGATAACCATATTTGGTAGGAACttttattttatttaaaaaaatcttttattttGTTATAGACACTAGGAAAATGATAGTAATTAAAAGATGAG-----AAGATGAGAAAAAAAAAAAACTTGTCTGGGCGCTGTGTAGAGTT-------TCTTGATG---AATCGGGATCAGCTTCTTATAAATAGAACCCTTGTGTTGTGAGCTCCATTGCCAATGAAAATCAATAAAAATAATTTCCATCTCTGCTCATGATTCTCTCTTTATACTGGTTTCTCATTGTTATATTCTGGATCCACTTTATCAAAATGTCACAGGACCCAGACAAAATGAAACAATTTGCTT ......:.:.......x:.-----....:.::.--------..x:.......x::x.x.::.:....:x.x.---.....::.::..x.x.x:x.x...xx...:..x.:-----.::.x..x.x:.:.:xx....::x....:.:----.......x.-------...:::..---....::x.x.x.x..-.:.....:xx.::.:.::....:...:...:.:......................:.......x...x:::.......:.....:.:.:...xx..::...-.:..x.x...x..:.-..:...:........:......:-...x........x..:xx.x..:.. 19M5I9M8I31M3I35M5D31M4I9M7D8M3D15M1I101M1I15M1I23M1I25M 218/321 67.9% 345/94230402 0.0% 39/321 12.1% 10740176 NA +7032 chr4 + 190214555 31070270 31070269 31070541 272 CATTCAACAGTGTAATTTTTGAGATATTTCACTGAAACAAAATGGGCATAATTATTTAGACGGACATCTGACAATGAATACTTTTCAGACTTGGCTGGGTAATGTTTTTAGCAT-CACTGATCCAGCAAGATCCAATAATACGACTGACTTTTTG----TTTAA-TAGAATTCCCTCTAGAATGTTCTACTCCATTAGTAAAAGGGAGTTGCTCAAGTTACATAGAT--ATGTTCTCAAGGACATTGGCTAATAAAACACAGACATTTGTGTCTAGATGC chr4 - 94230402 20330239 20330238 20330498 73899905 73899904 73900164 260 CAGTCAGCAATGTAATATTTGAGCTGTTTTATTAAAGTGAAATACTCTTACCTATTTAGACAGACATCTGACAATTACTGCTTTCCAAAC-TGTTTGAGGAATGTTTGTTGTACACATTGATCTTATAAGATGGAACA--------GAGTCTGTGCTGTTTTAATTAGGGGTTACTGCAGAATATACTGCTCTGTTAGAGGAAAGAAAACACTAAGGTT---TAGACTGATGCTTTCAAGGACTCTG--------AACACAGAAATACTTGTAGACATGC ..x...:..:......x......x.:...:.:.:..:::....:xx.x..x:.........:.............x.x.:....:..:..-..x:..:.x.......x.x.:.:-..:.....:x::.....xx..:.--------..x.:.x..----.....-...::x.:x..x:.....:.x..:...::....x::..:.:.:x::..x.:...---....:--...:.:........x:..--------........x..x:x...xx.x.... 90M1D23M1I23M8D9M4I5M1I54M3D5M2I18M8D25M 174/252 69.0% 260/94230402 0.0% 28/252 11.1% 10740031 NA +6197 chr4 + 190214555 31070270 31070269 31070482 213 CATTCAACAGTGTAATTTTTGAGATATTTCACTGAAACAAAATGGGCATAATTATTTAGACGGACATCTGACAATGAATACTTTTCAGACTTGGCTGGGTAATGTTTTTAGCAT-CACTGATCCAGCAAGATCCAATAATACGACTGACTTTTTGTTTAATAGAATTCCCTCTAGAATGTTCTACTCCATTAGTAAAAGGGAGTTGCTCAAGTT chr4 - 94230402 20327448 20327447 20327657 73902746 73902745 73902955 210 CAGTCAGCAATGTAATATTTGAGCTGTTTTATTAAAGTGAAATACTCTTACCTATTTAGACAGACATCTGACAATTACTGCTTTCCAAAC-TGTTTGAGGAATGTTTGTTGTACACATTGATCTTATAAGATGGAACAAAGTCTGTGCTGTTTTA---ATTAGGGGTTACTGCAAAATATACTGCTCTGTTAGAGGAAAGAAAACACTAAGGTT ..x...:..:......x......x.:...:.:.:..:::....:xx.x..x:.........:.............x.x.:....:..:..-..x:..:.x.......x.x.:.:-..:.....:x::.....xx..:..x::xxx..x:x....:---.x...::x.:x..x:.:...:.x..:...::....x::..:.:.:x::..x.:... 90M1D23M1I40M3D56M 134/209 64.1% 210/94230402 0.0% 5/209 2.4% 10742822 NA +5314 chr4 + 190214555 31070946 31070945 31071143 198 AAAAAAGACATTATGCAGTGTTTAGCTGAGTTTGTATAAAATACTACAGCTGTCTCTAGGAT--GCCTTTCCCTTGTGGAAAAAAGCTTAATTCTGCCAAGGCAAGAGTGCAGGGCCCCTTCTTGCCCTTATTTGCTTTTAGAGACTGACACTGTCAAGTTGATAAATGGTCTTTGACAGAAGCAAAGGTAATTCAAAGC chr4 - 94230402 20331857 20331856 20332047 73898356 73898355 73898546 191 AGAAAGGGAATTATGTAGTGTCTAGCTGAACTTGTATTGAGTGTTATGGATGTCTTAAAACTCAACCTTTGCCTCAGAGAGAAAAA--TAGTTCTGTTAAAGCC--AGTTCAGAAGTTTTTCTT---TGTATTTACATTTAGAGACATATTCTGTTGGGATTTTAGATGGATTTT-ATAAAAG-AGAAATAATTCAAAAC .:...:.:x......:.....:.......::......x:.:.::..::.x.....:x.::x.--:.....x...::x:..:....:--..:.....::..:..x--...x...::x:::.....---:x.....:.x.........xx.:x....:::.x.xx..:....x:...-.:.:...-.:.::.........:. 62M2I22M2D16M2D18M3D48M1D7M1D16M 125/189 66.1% 191/94230402 0.0% 11/189 5.8% 10739089 NA +3071 chr4 + 190214555 31085829 31085828 31085877 49 AGACTCTTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTCATCTCTTC chr4 - 94230402 86355152 86355151 86355200 7875203 7875202 7875251 49 AGACCTTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAAGTATTTTC ....::.:.::............................xx:.x.:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -55269323 -38961079 +3325 chr4 + 190214555 31085836 31085835 31085959 124 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTCATCTCTTCCTCTTCACCAGGAAATCTCAG-----GCTTTCATTTACAAATGACCATGTCAAATCTGT--TGATGACAGATTTAGTGCCTAACAGGAA chr4 - 94230402 18929912 18929911 18930020 75300383 75300382 75300491 109 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT--TTTGGTCCCATTT--------ATCTCAGAAGTAGCTGCTGCTTGTAAAT------------TCTGTAACGTTAACAGATTCTGAATCTAACAGAAA .................................--.:.xx...:x..:--------.......-----...x::::..::....------------.....--:.x.:.......:x.x::.......:.. 33M2D13M8D7M5I16M12D5M2I28M 80/102 78.4% 109/94230402 0.0% 29/102 28.4% 12155924 NA +14877 chr4 + 190214555 31086803 31086802 31087101 299 AAAGCACAAGGAATAATACATATTTGATCAAAATTCACTTGTAGACTAAGAGTTGATTGGCAGAGAACAAGCAATATTAAGCACTCAGCTCTGCTCAGAGAAACCACAGTGAATACATAGCCAAGAATACCATCTGTTGAATATGAAATTCTTGGATCAAGACATTATAGATACATTTCCCCAAACAGCAGGGACAGAAG-CCTTTCTGGAAACAAAATCACAATAGAGTTGCAGAAAGGTGA--AGTGAGAGAGAGGCAAATAACTGTTCTCTGCATTGTGGGGAGCAAGTTCTCTTACTG chr4 - 94230402 20344523 20344522 20344811 73885592 73885591 73885880 289 AGAGCACAGGGAAGTGTTCACGTCAGATCAGGATTCATTTGCTAGTTAGGAAGTGATTGGCAGAGAA--AGATGTATTAAGCACTCAG----GCTCAGAGAAACCAGAATGAATGTACAGCCAAGATCACCATCTGTTGAATATGAAATGCTTGGATCAAGACATTATAGATACATGTCCCCAAACAGCAGGGACAGCAGTCTTTTTTGGAAACGGTATCACAACAGGGT-------AGGCAAGCATTAAGATGGAAGCAAAAAGCTGTTCACTGAATTTTGGAGTGCAAATGACTTTATTG .:......:....xx:.x..::.:x.....::.....:...:x:::..:..:x..............--..xx:..............----..............x.:.....::.:........x:.....................x..........................x....................x..-.:...:.......::x.......:..:..-------...::.--.x.:...x:..:.....x.:......x...x...x...:.x....:.xx::...:.. 67M2D19M4D108M1I29M7D6M2I57M 225/286 78.7% 289/94230402 0.0% 16/286 5.6% 10742280 NA +3135 chr4 + 190214555 31097581 31097580 31097650 70 AATATACATATATATATATATATATATATATATATATATATATATATATATATATATAAATCTTTTTTCT chr4 - 94230402 8681910 8681909 8681978 85548425 85548424 85548493 69 AAAATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTT ..x..:x....x:..:.x.:-.....x..........:...::.:.:.:...:......x........:. 20M1D49M 51/69 73.9% 69/94230402 0.0% 1/69 1.4% 22415671 NA +16981 chr4 + 190214555 31100929 31100928 31101401 473 TCCTATCAGAATATTTGCAACTCTAAA---ATTAATTTTACC--CTATTTGCTGTGTTGGTTGTAATGAATCAT-ATTCAAAATCACCAAAAACTTACACAAAAGACTGCA-------------------------------CAGGAGAGGAAAAAAAAT-----GTATTTGATTTTCCCAAGCTGCTTCTCTGTTGATTATTACCAGGTAGCATTTTTTTTTCATTT-----CTTATTCTCATTTGTATAAAAATCCAGATAGAAATGAAAGTAATGTATTAGCCGTTTGGTTGAAAAAATGTTAAGTCAATTATACTCTTGCAAGATTTATAAGAACTAAAGTGAGTTTAAATTTGAATTGTCAAAGGAAATTTTACATGCATTAAGCCCTCAGTAAAATCCATCATAAGTATTTAATTATGTGCTGGGTTTTGAACTTCTGTATCTAAAGTGGTATTTTTATAAAAAAAGATTTTTTTCAGTGA--ACTTGTAGGCATCACTTTAAATTATACCTGTAA chr4 - 94230402 20353948 20353947 20354450 73875953 73875952 73876455 503 TTCTAGCAGTATAGTGTCAAATTTGAGTAGATTACTTCTACTGACTATT-ATTGTCCTGGTATTAACAGATTATTCTTTTGTATCATCAAA----TACACATAAGGCTATAACTGAAAGATAAAGGAAAGAAAGCAGAACAATAGGAAAAAAAAGAAAACCACACAAAATCAGTCTTCTCCAGATGTTTTGATGTTGGCTAT---CAGGTATCACTAATTTTTTTTTGGCAGACATAATTTAATTTGTATGAAAATCCAGATAGAAAGGAAAATAATGTATTAGCTGTATTG--GAGAAAATGTTCAGTCAATTATACTCCTGCAAGATTTATAAGAACTAAAGTGAGTTCAAATTTGAATTGTCAGAGGAAATTTTACATGCATTAACTGCTCAGTAACATCCATCCCATGTATTTAATTATGTACAGGGTTCTAAACCAC-ATTTCCAAAGCAGCGT--------AAAAAAGTTTTCCTGAACTACCATTCATAGACATTGCTGTCAATTATACATGTAA .:...x...x...x.xx...x.:.:.:---....x..:...:--.....-::...x:....xx...:::..:..-x..:x:x....:....----......x...:..::.-------------------------------:....:.::...:....:-----:x.x.:::.:...:.x..x..:..:xx.....::...---......x..:.xx.....:x..x-----.x..x.:.x........:................x....:............:..x.x.--..:........x..............:.............................:...............:.....................x:x........x.......x:.x..............:.x.....:.:...:x.-:.x..:....::.::.--------.....::....::.x.::x.--.:.::...:...::..x.x........x..... 27M3I12M2I5M1D24M1I16M4D16M31I18M5I37M3D23M5I59M2D148M1D16M8D20M2I33M 340/454 74.9% 503/94230402 0.0% 68/454 15.0% 10746981 NA +20557 chr4 + 190214555 31104402 31104401 31104952 551 CTCCACAATCTCTATGATT--TACACTGGGAAGAAATCAGTTTGTTCTTTT------AGGTAAATGATATAGCACTTAATTGAATCAATGCTTAGTGCTTCTTGCCAGAATGTTATCATTTTCTATAGCAGTACACTTGTCCAAGAAAATGTTAGTTTTTGTGTATAAAAATACATTACCATGCACTCTGTCTTCCCAAACTATTTTGAGCAACTACTTAAAATGATTTAATTTGCAGGACTG-TGTGCCTAATAAGCTTTCTGTTTAAAATCCTAACACTGAGCTTTCTAAGAGCGACGTGGTCTACATGTAAACTCTTTACAAACAGCATCTGAATTACAGGCAGAGACACACATTAGGAGCTGCCAGAATTGTGTTTGTTGTGGCTGCCTGGTTAGCTGCTGCTTGAACAGCTGAAGTATGAGCGTATTGATCAATTAGTGCCAGCTCAAACAAGAAGTATGCCAACTGAAAGGGAAGTCAGATTTGTATGC-AAAGCTGCATTGGTAAAATTTGGCTGGTATAGG---TGGTAAAAGGGTTGGACAAGCTATTTAATATG chr4 - 94230402 20355661 20355660 20356203 73874200 73874199 73874742 543 CTCACCATTTCCTATTGTTATTACATTTAAATAAGAAAAGCTTATTTTTTTCTATGGGGGCAAATGGTGTAGCACTAGCATTCTTT--TGTCCAGTACATCTGACTA----------ATTGCAGATACCGATCCATTTTATTTA-CAAACGTTA---TCTGTGTATAAAAATAGATTACTGTGGATTCTGCCTTCCAAAGC-ATTTTAAGTAGCTACTTATTAAGGTTTAATTTGAGAGGCTCCTGTGCCTAATAAGGTTTCCATTTACAATCCAAGCTTTGAGCTTTATAAAAGCTACGTGGTCTACATGTAAACACTTCGTAAATAGCATCTGAATAACAGGCAGGGACACACGTTAGAAACTGCCAAAATTGTGTTTGTTGTGGCTGCCCTGCTAGCTGCTGCTTGAACAGCTGAAGTAGAAATATATTGATCGACTAGTGCCAGCTGAAGCAAAAAATATGCCAACGTAGAGAAAAGTTAGAAATAAACACTAGAAATGAGTTTCTAGGAT---GTATGTGTATGTACTGGTAGAGAAGCAAGAC-AGCCATTTAATTTG ...xx..x.::....x:..--....:.x::.x:.:.xx..:..:..:....------:..:.....:.:.......x:xx.xxx.:--..:::...:.x...x:.:.----------...x:xx...x.::.x..:..xx::x.-x...:....---.:..............x.....::..x.:....:.....x..:.-.....:..:.:.......xx.x.:.........x::.:..x-.............x....::....x.....x.:.x:........x...:...x...................x...:::...:...........x........:.......:....:.:......:......................:x.:..........................x:.:::........:.:...........x..:...:..:.........xx.:..::....:...xx.:x.::.-.:.:x..x:..xx..::..---.:xx..:..x.---.....:.:::.:x:...-...:.......x.. 19M2I30M6I29M2D19M10D27M1D9M3D44M1D41M1I251M1I19M3D11M3I17M1D14M 383/530 72.3% 543/94230402 0.0% 34/530 6.4% 10748741 NA +12786 chr4 + 190214555 31112593 31112592 31113064 472 AATCCAAGAAGCAAAGCCTCTCTGTTGTTTACAGTATTTAAAATAAATTGTTTCAGTTCTCTGTGGGATT-----------GTTTCCTATT-----GAGAAGAAGCTCATAATTAAAAATAGCAACTGGAATAGAATTACAATGCAGGTATTTTTACAATGTGGGCACCTGGTATATTATCTTGAAATAAACTGACCTATAGTCATTACTGATAGTGTTCTTTCTAGGCAGGATTTGCATAACCACAGAGAATTATTCCCTCTGCCCATCCTTTTGAAAAGAGCATAGAGTATTTAGTAGAGAGGAGGTAATTATGCTATTTGGGATAATAGTCAGATTTACTGTCTGGGACTGCTATTCTGAACACTACATGAATTTCAGTATAATTGCTCAGATCCTGTTTAGATGAAAGCTGATTCA----------------TTTTTTTCAGGTCTTCTTTGTGCTCCCTTTTTATTCTTATTGGTATTTTTTTTA-AGCAAGCAGGTCTA chr4 - 94230402 20360235 20360234 20360727 73869676 73869675 73870168 493 AATGTATGAAGTAGAATCCTTATGATGTTTACAGACTCTAAAAT----TGTTTCAATTCTCTTTAGAATTTTTGTTTGTTTGTTTTCTGTTTAATGGAGAATAAACTTATAATTAAAAACAG--AGTAGAATGAAATGGCGGTGCAAATGCTTTGCTGTATTGGACACCTGATAGATTTTCATGAAAAAAGCTGACATATAGTTATTATTAATACTTCTCTTTTTAAACCAGATATACCAGAGTACCTGCACCTAGGTTGTTTAGCATTTCATTTGATGTAAA-ACAGAATGTTAAGCAAGAAGAAGGTAATTATACTTTTTGAAATAA----CTGGTTTACTGTCTAGGACAGCTATTCAAAACATAATGTAAATTGCATTATAATTGCATATCTCCT-CTTAGGTAAAATTTAATTTCCTCTGAACTTTTATTTTCTTTTTCACTTTTTTTTAAAATACCCTTCTGATATCTATCAGACCTTTTCCAACAGCAAGTAGATGTA ...x:.x....:.:.::.::.x..x.........xx.:......----.......:......x.:.:...-----------....:..:..-----.....x..:..:...........:..--.x.:....::...x:.::....::.::...xx::xxx...:......:..x...x..x.....x..:.....x......:....:.:...x.x:.....:..::.x:...x.:.xx:.x:..xx:x.x:..xx::x.:.:x.xx.:.x.....x:x:.:-.:...:.:..x..:.:::..:..........:..x....::....----.x.:..........:....x.......x:....:x.::.:....x..x.........x:.xx....-:....:.:...x:.:...:x----------------.:.......xx.:..:..x:x::x.....:.x..x::...::.xx:....::x.-......:..:.x.. 44M4D22M11I10M5I26M2D159M1D45M4D66M1D20M16I54M1I14M 303/460 65.9% 493/94230402 0.0% 45/460 9.8% 10752358 NA +17276 chr4 + 190214555 31114777 31114776 31115151 375 AAAATTCCTGTTATTTAATCAGACTCCTTAAATAAAAACATGTGAGAGCTATCTTTCAAAGACTTCTCTTAAAGCATGAAA-TTGTT-ATATGGCATTCTAATTTA--CAGTCCACAAAGCTATCTGTGATAGCAG-AAAAGGGTTCTTTCTTGAAATGGATGCTTCATTCTTTTTCTCCCATTAGCTATTCAACGCCCTTTGTCTATTTATATTCATTATTGCCGCTGTAAGAACAGTGCGGGTTTTCATTACTTCATTGGCATGGGACGCAATGATTCAGTTTTGCTGTCACTTCTGACCCGTTTCCCTCCCTCCTCCACTTTCGCTTACTGAAAATCTACAAATAG-AAGGAAAAACATAGACAGTATAATACAGTAC chr4 - 94230402 20362684 20362683 20363052 73867351 73867350 73867719 369 AAAATTCAGCCTATTAAGCCTGATCCCTTAAAGTAAAATAAAGGAGACCTGTCTTTCACAGACATTTTTTGAAGCATGAAAATTGTTTAAAGGGCATCCTAATTTAGCCAGTTCACAAAGCTATCTGTGATGGCAGGAAAATATTTTTTTCGTGAAATGGATGCTC-------TCTCTCCCAGTAGCCATTCAGAGCCTTTTGTCTATTTATATTCATTATTGTTGCTGTAAGAACAGTGCTGTTTTTCATTATTTCATTGGCATGAGAAGTCCTGATTCAGTTTTGCTGTCAATTTTGACTTCTTTTTGTATCCTCTCTGCTTTCACTGA-TGAAAAGC----ATTAGTAAACAGAAACAGAGAAAACCTCATAAAATAC .......xxx:....x.::.x..::.......xx....:.x:x....x..:.......x....x.:.:..:..........-.....-.x.x.....:........--....:..................:....-....x:x..:....x.............:-------.:.......x....:.....:x...:........................::................x.x.........:............:..x.:xx...................x..:....::x...::x.x:.::...::.....:..x.-......x.----.x...-..:x.:.....x...x.::x.x...x.:... 81M1I5M1I18M2I28M1I29M7D158M1D8M4D5M1I31M 284/363 78.2% 369/94230402 0.0% 18/363 5.0% 10752093 NA +3125 chr4 + 190214555 31116797 31116796 31116855 59 AACATTCAAACTGAATATTTGTGGGGTTTTTTTGTTGTTGTTGTTTGGTTTTTTTTGAG chr4 - 94230402 21317913 21317912 21317967 72912436 72912435 72912490 55 AACACTCA----GAATATTTTTAAAGTCTTTTTTTTGTTGTTGTTTCGTTTATTTTGAG ....:...----........x.:::..:.....x............x....x....... 8M4D47M 46/55 83.6% 55/94230402 0.0% 4/55 7.3% 9798884 NA +3869 chr4 + 190214555 31119299 31119298 31119412 114 CTAATTAATTG-AGCGCAGATCAATCTGTCATAGGTCTGTAACCATTGAGAGTCAAGGGTTATAATTAATCCACACCCTTTACCTTAAGGCAGAGCT----GAAAATCTATATAAAGTT chr4 - 94230402 20365410 20365409 20365528 73864875 73864874 73864993 119 CTAATGGACTATAACCCAGATTAATCTGTCATAAGTGCGTAACCATTCTGAGCTGATGTTTGTAATTAATTCACTGCAGTAATCTGCACACACAGCTCAAAAAAAATCAATAAAAAATT .....x:.:.:-.:.x.....:...........:..x:.........xx...:::.x.x..:........:...xx.xx.x.:..xx.x:..x....----:......x...x...:.. 11M1I85M4I18M 80/114 70.2% 119/94230402 0.0% 5/114 4.4% 10753889 NA +4436 chr4 + 190214555 31120325 31120324 31120509 185 TTTTTTAAATTCTT---CTTTTTTCCATTCCTTTCCTCTTTTTATTTTCTTCCTCAAGCTTCCTCCATTTTTTTTTTCCTTTCAGTCTTGTCTTTCGTTGTTTTTCTTTCTATTTTTTTCTTTTTTTTTTTTTTTTGGTCAATCTGTATGTTACATCTCCTGTATGTTCACTGAAAATTAGGTATAAT chr4 - 94230402 20151676 20151675 20151857 74078546 74078545 74078727 182 TTCTTTGTGTTCTTGATCTTCTTTCCTTTCCTTTCCTCTTTTCTGTTTAAACTGCAACATTCTAACATTCTTTTTTTCCTT----CTTTGCCTTATAT--ATTTCTTTTCCTTTTATAACATTTTTGTTTAGTTTTGGCCTCTCTGTGTGGCTCTACCTTTGGAGCCCTACTGTGCCTTTGGCATAAT ..:...:x:.....---...:.....x...............:xx...xxx.:x...xx...:xx....:...........----::...:...x::.--x...::....:x...x.xx.x.....x...xx......:.xx.....:..x:x.xx.:::..x.xx:::....x:xx..x..:..... 14M3I64M4D13M2D88M 117/179 65.4% 182/94230402 0.0% 9/179 5.0% 10968649 NA +3059 chr4 + 190214555 31120334 31120333 31120395 62 TTCTTCTTTTTTCCATTCCTTTCCTCTTTTTATTTTCTTCCTCAAGCTTCCTCCATTTTTTT chr4 - 94230402 28307748 28307747 28307809 65922594 65922593 65922655 62 TTTTTCCTCTTTCCATTCCTTTTCCTTTTTTTTGTCCTTTCTATAGAATTCTCAACTTTTTT ..:...:.:.............:.::.....x.x.:...:..xx..xx.:...x.:...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 2812586 NA +3145 chr4 + 190214555 31126247 31126246 31126304 58 CTGGGTTCAAGAGATTCTCACGCCTCAGCCTCCTGTGTAGCTAGGATTACAGGTGCAC chr4 - 94230402 18197142 18197141 18197199 76033204 76033203 76033261 58 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...........x.x...x..x.x........::::x......:.:.:....x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 12929105 NA +22113 chr4 + 190214555 31126971 31126970 31127635 665 CAGTGAAGTGAA--------------TTCATTGCTCACATG--GGAAAATCTGTTTACACCATGAAATCTGCTCTCCTATGTGATACCCACTTCTGGCAAAGTCAAACCTGAAAATATTGGCAAAAACAAAAACAAAAAAGAGAGACTTAAATAAAGAGCATGTGTGGCAGATGGTGGAGACGAATAGTTGATCATCACTGTCTGCTAGTCTCACTCACTGTACTCCCTTCAAATTGTTGCAGTACCGTAATTTTGCCATGATTATCTATGAAATTATATTGACTGTTAAGCTCTGACTCACGCTTTTCTTAAGTCATCTATGGGAAAGATGACATTCTAATTACACTCCTGATTTTTTTACACTATGAGTTTGTTAAGCGCAGACACGTTTAACTAAAGAAGAAGCCTAAATGTATGTAATTTGACATTGTGACAGATTAATACTTAGGCATTAGACCAGCAGTACAATTAGATAGCTTGAATGTGTCCTACATCTTAATGTCTATATGACTTTAAGAAGTCACATTAAATCCTCCTTTTTTAAAGGGTCTGTTGCCATTTTGTTGATTGAAATAAATGAAAGTCTACCAGAAGATTTAAGTGAATTATGAGTAGGTTCATCACAATTACACCTAATTCTAGAAAATTGAAATCTAGGGAATTAAGTGTAAATTCAGAAT chr4 - 94230402 20367200 20367199 20367822 73862581 73862580 73863203 623 CAGTGAAGTGAAAAATCATGTAACTATCCATATCTCTCCTGTAGCAAAACCAGTTTTC-----------------CCTACCTGGTGTCCATTCCTAATAAAG---------AAAATGAAGTATGAAATAATACCAAGAAATA-------AAATAAAGTGGTGGCACAGTATACAGCTGAGATAA---GCTAATAATGGCTGCTAGATAGGTACTCT--------TCCCTCCGAGCTCCTGCGGTCCCATCACTTTAGTATGATTATCAAGGAAATTATGTTGACTTTTGAGTGCTGCTGCGGACTATTCTTGAGTCATCTTTAGAAGAGCTGACATTCTAATTGC-TTTATGAATTGTTTCAGCTCAAAGTTTGTTAAACACTGACATGTTTTACTGAAAAAAAATAAAAAACGTATGTAATTTGACATAGTGGCAGATTAATACTTCAGCATCAGATTGGCAGAACAATTAGACAGCTTAAATGTGTCCTACATCTTAATGTCTGTGCTACTTCAGGAAGCCATGGAAAGTCCTAC---TTTGAAAGATATGTTGCCATTTCACTGATAGAAATAAGT--CAGGTTATCAAAGGATTTAAAGGGATTATG---AGGCTTGCAACAATTACATTTAAATCTAGAAAATGAAAATCTAGGGAATT-----TAAGTTCAGAGT ............--------------.:...xx...x.x..--.x....:.x....x.-----------------....:x..:.::...:.:..:::....---------.....:xx.xxx:...:..x.x...:...x.-------........x.xxx.::::.:.x.::.:x....::.---.:.:..x..x:...::x.x...x:x.x..--------.....:.:.::.x:...:..x..:.x.:...:x:.........x.x........:......x..:..:x...x:x.:x:..x.....:........x.:.:.:..x.............:.-:.:x...x..x...xx:..xx:..........:.:.x....:....x...:..:..:..xxxx...:................x...:.............x:....:...:::....x.........:.....:........................:.::x....:.:....:..::xx..:....x.---...:..:.:.x...........:::....x.......:.--x..x:..:..:.:.......:x.:......---...:.:::x.........::...x..........x:..............-----...:......:. 12M14I15M2I15M17D27M9D31M7D35M3D29M8D121M1D191M3D39M2D30M3D50M5D12M 434/607 71.5% 623/94230402 0.0% 74/607 12.2% 10759771 NA +3014 chr4 + 190214555 31127996 31127995 31128057 62 CATATATATGTGTGTCCATGTGTATATATATACATATATATATGTATGCACATATGCATACA chr4 - 94230402 23629631 23629630 23629692 70600711 70600710 70600772 62 CACACACCTGTGTGTGCATGTCTATATATGTATGTATAGGTGTACATGGACCTACGCACACA ..:.:.:x.......x.....x.......:..::....x:.:.::...x..x..:...:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 7498365 NA +3443 chr4 + 190214555 31128058 31128057 31128130 73 TATGTATATATGTGTGTGTATATATATGCATATATATGTATATATGTGTATATATATACACATATATATGTAT chr4 - 94230402 37363040 37363039 37363111 56867292 56867291 56867363 72 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTAT .:....:...:x...:.:..:..::.::x......xx..:...........:...x:.....:.-........ 64M1D8M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% -6234982 -87995420 +3151 chr4 + 190214555 31128072 31128071 31128180 109 TGTGTATATATATGCATATATATGTATATATGTGTATATATATACACATATATATGTATGCACATATACATATATACACACACACACACACACGGACACACATATAAAA chr4 - 94230402 8395789 8395788 8395875 85834528 85834527 85834614 87 TGTGTGTATGTGTGCATAAACATGTATTTA----------------CATATGTATGCCTACATTAATACA------CACACACACACACAGACACAAATGAATAAAAAA .....:...:.:......x.:......x..----------------.....:....:x.:..:xx.....------..............x..:x.x.::x...x.... 30M16D24M6D33M 66/87 75.9% 87/94230402 0.0% 22/87 25.3% 22732283 NA +3065 chr4 + 190214555 31128074 31128073 31128147 74 TGTATATATATGCATATATATGTATATATGTGTATATATATACACATATATATGTATGCACATATACATATATA chr4 - 94230402 4481679 4481678 4481752 89748651 89748650 89748724 74 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .....:.:.x.x......x:...:.:......:.:.x.:........x:.:..::x:xx.......::..:.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 26646395 NA +4302 chr4 + 190214555 31128091 31128090 31128197 107 ATATGTATATATGTGTATATATATACACATATATATGTATGCACATATACATATATACACACACACACACACACGGACACACATATAAAAGTCTGAAACAAAATCTT chr4 - 94230402 8395788 8395787 8395890 85834513 85834512 85834615 103 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCC----TACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCT ..:...:...:....:...x.:..::.:x..:..........x----.....xx...................x:x...x.::x......:x.:x....x.x..::. 43M4D60M 74/103 71.8% 103/94230402 0.0% 4/103 3.9% 22732303 NA +3398 chr4 + 190214555 31128092 31128091 31128155 64 TATGTATATATGTGTATATATATACACATATATATGTATGCACATATACATATATACACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .:....:...:x........:..:....x......xx:..:.:..:.::..:...x........ 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -6234948 -87995454 +3688 chr4 + 190214555 31128099 31128098 31128174 76 ATATGTGTATATATATACACATATATATGTATGCACATATACATATAT--ACACACACACACACACACGGACACACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.......:.:.::.:.x.:..:...x..:::.::...:.x..:..--.:................:......x.. 48M2I28M 55/76 72.4% 78/94230402 0.0% 2/76 2.6% 22732311 NA +10124 chr4 + 190214555 31133713 31133712 31133915 203 TGCTGTAGTGCAGTTTTCATGTGCCAGCCAGCAGATTCATGTTTGAGTTGATTCAGCAAGACTGCTTGAGATGTGGCGTACAGAATCTCCACTCTATATAATAATGCCACATTCAGAATGACAGTGGTCTAAGCCTAAGGGCAGTAAATGCTTCTTGAGATACATTCAATTGCTGTTTGA----GTTTAGCCTAAGGTACAAAGAAA chr4 - 94230402 20369347 20369346 20369548 73860855 73860854 73861056 202 TACTTCAGTGCAATTGGCATATTTCAAACA-----TCTATGTTTGACTTTATTCAGGAGAAATGCTTTAGAGATAGCATGCACTGTCTCTGCAGCACATGATAATGCCACATTCAGAGTGACAGCAGTCGAAGCCTTGGGGCACTAAATGCTTCTTGAGATATGTTCAATTGCTGTTTAACTGTATTTAGCCTAAGGTGCAAAGAAA .:..x:......:..xx...:.x:..:x..-----.::........x..x......x.::.x.....x...x:.:..:.:..xx:....::.xx:.:..:.................:......::...x......x:.....x..................::..............:.----:.............:........ 30M5D145M4I23M 151/198 76.3% 202/94230402 0.0% 9/198 4.5% 10764366 NA +54764 chr4 + 190214555 31142455 31142454 31144403 1949 ATTCTCCTTGGATTTCAGATTCAAGGCCTCTTCCAGATGTAGCCCTGACTGGGAAGTGCACTCGTGAGTGTGATGAGTATGGCCACTCAGACTCCTGCTGGATGCCGGTCCGCACTTCTCCGGAGAGGAAG---AAGAGCCAGCCTAAACTGTCCACTTTCATGCCTGTTGATGAACGAGGAAGCCAGGAAAAGCTGGCCAATGGGGAGGCCGCCATCATGGGTGACCGCAACAGAAACCTCCTGAACAAAAAGTTGACCTCATCCTATGAGACCTTCAGTGCAGCTAGTTTCAGCAAAAATGAGGAAGCCAACCCTGAGGATATTCCCCTTACAAAAACAGGGGAATATAAGCCATCTCCTGTCAATACTCTCACTAGAAGAGAAGTTTACCTGTAGGCTATAAAGGAGCAACAGCAAAGTTCTTTACATGTATGAAAAGGAGAATAAGGGGCAAAAACCTTACAAAGCAAAACGTTT--------------AATCACAAAGAGGGGGCTACCAAAGAGACA-AAGCTTTGCCTGCCACTTCTGCCTCCAGATCAGGCCTTTAGTGATACTGTTAGCCTGATTCTACTGTACAATGTAGAAACCATCCTTGTTACTTGCATGTCTAACCCCTTCACTGATTCCCAACACTCACTTTCTCTTCCCCACCCCTCTCCAAAAAAAAAAAAACAAAAAGAAAAGAAAAAAAAAGGGGGATAGTTGCAAGTTTCTTTCACAGTAACTGTACGAAGCCTGATT-AGCAGAACACAACACACCCTCATTATCCCTAAGCTGAAGCATGATTTTAGTCACTTTGATTTTGTTCGAGTGTCATCTGGCTGGTCAAAAATAAGCAGGACAGATAAAATGTATTTCAGACATACCATCAGAAAATGGTTTATCACCATCAAAGGCAATCCTTTGAAAGTGATAGAGTCCCTCTAAAGGTACAGTCCTTAGAAAGAGGGACTGTATTAAAAAGTATTTTGGGAATATCAAAGCTTTAATATTCCAAC---------AAAGACTAAGAGAAAAACAATAC--TCAGTGGGTGATTGCAGTCCTAAAT-TGTCATATGTTGTTATTTTCAGGTCAAGAGCATCAACTTCAATTCCATACATTCACCAAATAT------------------------------------------------TCTCAGTATACACACAGTCTTGATTACATGTATCA-ATTTCACCAGTTATGACTTCTAAAAATTATATATATTTTTTCAGAACAAGACCACTATTATTAACTAACTTGAACAATTGT-ATCATCCAAAGGCCAAAGATCATATGGCAGATCAGGGAAGTCATGAAGTTGATTTGGTCTTGACGTGGAAAACCATTAAACAACAAAAGCAACTGAACCCATGTATGCACAGAA-----------ACAATCAAACACTAGTTCATTTTATAGTGCCCAG--GAAAATGTTCCTTCTTTTAAAATGGATTTTATTTGAAAGCGCAGAAAATGAAAACTAGTGAGATATATTTT-TGGTATTATAATA------GGCAATTGGTTGAGGTTCAAGTTT---AGTTTCAGGTAATATTATCAGGGAAGATTCCA-------------TGTTTTAAAATAGTATT--TATGGATCATGGGTAGGTTAAG------------AAAGATGCATTGGC-ATATAGTCTTGATAGTTAAGTCCACGATTATCATTTTAGAATCCAGGCTATGCTTGCTG---CTCTTTTTATCCACATTTTAAATTACAATTGCATTTTTTACTTGTTCAGTGCACACTTTGATGCACCACAAGTGCATTAATTTTGAATCGTGTGCAATATAGAAATATTTTGAGACTCACAACATTGAAACAAGGTGACACCCTAGTTGACTTTATCACTAATGTGATTTGAACATTATTT-------------------AAACAAATCTAGACTGAACATGAAAGAAAGGAGTTTTGGGCAGTGACATTTTTCACAGAATGTATATCTCAAAGGTGAAAGCAGA--------GTTTTTCCAGTGCAATAAAAAGAAACAGAATATGCAGATTTTGAGCTACTCACTCTATA chr4 - 94230402 20376423 20376422 20378387 73852016 73852015 73853980 1965 ACTCTATTTTACTTTCAGATTCAAGGCCTCTGCCAGATGTAGCCCTGACAGGGAAGTGTACCCGAGAGTGTGATGAATATGGCCACTCGGACTCCTGCTGGATGCCAGTTCGCACTTCTCCTGAAAGAAAGCAGAAGAGCCAGCCAAAACTCTCCACTTTCATGCCTGTTGATGAACGGGGCAGTCAGGAAAAGCTGGCCAATGGAGAAGCTTCCCTCATGGGTGATCGCAACAGAAACCTCCTTAACAAAAAGTTGACCTCATCCTATGAGACCTTCAGCGCCGCTAATTTCAGCAAAAAAGAAGAAGGCAATCCAGAAGATATCCCCCTTACACAGACAGGGGAATACAAGCCATCTCCTGTCAATACTCTAACTAGAAGAGAAGTTTACCTGTAGGCTAAAAAGCAGCAAC----AAATTTCTTTCATGT-TGTAAGCAAGAA-AAGGGGCAAAAGTCTTA-AAATCAAAACAATTTTAACAAAAATAAGAAACAAAAAGTGGAGGCCACCAAAGAGACATAAGCTCTGCTTGCCACTTCTGCCTCCATAGCAGGCATTTAATTATACTGTCTGCCTGACTATACTGTACAATGTAGAAAATG---TTGTTACTTGCATGTCAAATCCC--------CCCTCACCACT--TTTTATTTTCCTAAATCT--------------------------------------------ATGGTTGCAAACTCCTCCCATAGTAAT------GAGCTTGATTAAAAAGAACACAACACGTTGTTGTTTCTCCTCTGCAGAAGCATGAGTTAAGCCACTC--ATTTT-TTTGATGGTCATCTGGCTTGTTGAGGATAA-CAGGTCAGGGAAAATATATTCAAAGCATATCATCTGAATATTGCTGATCCCCACCAGGGACAATCCTTCAGAAACCATACAG---ATATAAAGATAAA-----TATAAAGGCATAAT-CATTAATAGGCACTTTGTGAAGACCACAGCTTTAATATTCTCACCTCTCATCTGATGCCGGATGCGACAGAGATACGTTCAGCTTGAGACTGCCGTCCAAAACATGGCAAACTTTCTTAT----GAATCATGAAC-TCTGGTTCTGTTTTATCCATAGAACAAATGTGTTCTAGCTGTGTCTCTTTCTCTCCTCTCTCATTCTTTGTAATGATTACTTCAATGTAAACACAATTAGTAACACATATACCGTAGCATAGTAATGATAAACTCTTGAAATTA-------TTTTTCTGGACAAGACTAACAT------CTAACTGGGAAGATAGTAATAACAAAAAGGCCAAAGATCACACTATGGATCAGGGGAACTGCTAAGT--ATTGGGGCTTGGCATAGAAAACTAATATAC-----------TCATACACATGTACTCATAGGATACCTTCAGTTACATTTGCACAGCAGCACATTCTACAA-GCCCAGATGACAATATTTTTTCC-----AGTGTGGTTCAGTTGAATGCCCAGAA---GAAATGATGTGGGGTTTTTTTTGTGATGACATGATATGTTGCAGCAGATGTTTCATATATGATACTGCCAGTTCCAGGGAAT-TTATGAGGTCAAAATTAAAAAATAATAGTATTGCTAGAAGGCTGTATTAGTGAGAATGCTTGGTAGGATGAAGGTGGACAATGTGGTGATACAATGACAAGAGAATATTAAAACTCAAATATAAAGCCTTCTTTTCAGAGTGCAAGGAATGATTGCTGAGTCTTTTGTCATCGGTGTTGCAGATT--GATT---TTTATCAAAGAGGTAATGCAGGTTTTCTTGAAACACAAGTGCATTAAAGCCAAGTGAAGTGCAATACTAAACAGTGTCAAGACTCAGAACATTTAGGCTAGGTAGAAA-------------ATAAACAGTGTGATATGATACTCACCTAGTGGATCAAGATGAGTCAAAAGGAATCCAAACTGTCTACAATATGCAAGAGCTCTGGGCTATAATGATTCTCACAGTGAGCACTTCAGGAAAGGAAGAGGAAATGAAACAGGTTTTT---GTGCAAT-AAAAGCTACAAAAGGGGCAGAACTTCAGCCAGTTTCTCCCTA .:...x:..x:x...................x.................x........:..:..x...........:...........:.................:..:...........x..:..:...---...........x.....x..........................:..x..:....................:..:..:x..x..........:.................x...................................:..x....:............x..:....x...:..x..:.....:.........x.:...........:.......................x............................x....x......----..:..::..x.....-..x..:x:....-...........::....-...x......:x..--------------..x..x....x..:...:............-.....:...:.................x.x.....x....:.x.......:x......:.x..................x::---................x..:...--------::.:..x....--:...x.:....:x.x:.:--------------------------------------------..:.......::.:..::..:.....:------:...:.....-.:x............:::x.::..x::...xx..x.........x..x..:....:--.....-..:..xx...........x..::.::....-....x...:x.....:....:x.::....:....x...x..x.:.x...x...:..::.:........:::..::x...x..---x.x.....:..x.-----..x....:x:x.x.-:.....x.:.:.:....x...x.:..x.............:x..---------:.x.x.x:.x:x:.x.:x:....--....:xx.x..:...x....x...:-..x..x.:x..x....----:::...x..:.-..x:x...x:..::..x...xx.x.....:.------------------------------------------------::...:.:..x.....:.:xxx.x:....:..:.:-.x:x:.x:.:.x..:.x:...x:......-------......x.:.......:.x:..------......x.:.x:..x..-..x.:xx...............:.:x:::........:.:::::x....--...x..x....:.:.:......:.x..x..-----------:::x..x......:x..:..:.-----------...x.::x...x:..:x....:..:.:-......--..x...:..::...:-----.:..x:x..:.x.....x..x.....---....xxxx...:.:.x.x....-..:.:x:..:...------:...:x..x..x.x:.x::.xx:.---....:....x...-....x...xx.:.x.:x.-------------..:.xx..:::x.....--.:x.:..xx.x......x.:.:------------::x...:..x..:.-.x.x.:.x..:.x.x.:..:.x:.x::::x..x...:...:.x..:.xx...x......---..:..x.:...x:::..x:.:...--:...---...x.:.xxx:xx:.:....x::...xx..x.x..............xx:::.:.x:x........:x:..xx:.x.::.......x......x.::.x....::x.x-------------..x.x:.:......x...xxx.:.::.-------------------...x:....:.:....xx:.::.x.x:x.:...:.:.....x:.:.::x..:......x:x.:.:x..xx:..:.x:.:..x.:.--------......---.......-.....xx...:..x:x.....x:..x...:.x.:x...:x.. 131M3I280M4D15M1D12M1D17M1D14M14I30M1I82M3D23M8D11M2D18M44D27M6D10M1I56M2D5M1D30M1D82M3D13M5D14M1D44M9I23M2I25M1I16M4D11M1D31M48I35M1I29M7D22M6D17M1I49M2D30M11D22M11I27M1D6M2I15M5D26M3D22M1I13M6I24M3I13M1D18M13I17M2I22M12I14M1I59M3I24M2D4M3D108M13D27M19I85M8I6M3D7M1D42M 1288/1803 71.4% 1965/94230402 0.0% 308/1803 17.1% 10766032 NA +3241 chr4 + 190214555 31143044 31143043 31143146 103 CCTTGTTACTTGCA-TGTCTAACCCC--TTCACTGATTCCCAACACTCACTTTCTCTTCCCCACCCCTCTCCAAAAAAAAAAAAACAA--AAAGAAAAGAAAAAAAAA chr4 - 94230402 78376782 78376781 78376889 15853514 15853513 15853621 108 CTTTGTAACATGCAATGTAAAACACCATTTCAATGGTCTGCCCCATGCCCTCATCCTCTCCCCATCCTCTTCAAAAAAAAAAAAACAACCACAGAAAACAAAAAACAA .:....x..x....-...xx...x..--....x..:.::x.xx..:x.x..:x::..::...xx:.....:.................--.x......x......x.. 14M1I11M2I60M2I18M 74/103 71.8% 108/94230402 0.0% 5/103 4.9% -47233738 -46996664 +79951 chr4 + 190214555 31144568 31144567 31146826 2259 ACAATGTAGCTTTGGGTAGTTTCATGCTTTGCAGAATTTCTTAGACTATAAAGTGACACAGCCTGGAATATAGGTTGATAATTCACTATAGGTCTTCAAAATACTTATCTTTGAAAACCGCTTCTCTGTTTGGTGGGGTACAAT-TTGGGGGTCATTTCCTTATGCTCTTTCTTAAATGGAGTTTTCATTTTGATGT-----TAGTTTATGTATAATAGGTAGGATGCAAAAAGATATGTAATTGAAACAAAAAACATTGGACTAAAATATCAGTAATTGAACATGTTTATGTTTGATTATTATTTACACTATGGAAAGATGCAATTCTAGTACTTTGTTAGGAAACTGCATTAAAGCAGTT-CTGCCTTGTATAATCTGTAAGTACCTATTAAGACAAAATACTTCTAAAGATACTTATGAAATGTATACACATTTTTTCTTGCACGTTACAAAGAAAATACTCAATTGCATAACACGGATGTTTGACAAACTTT-----------TTTTTTTTTAA--------------------TGCATTTCTTTCTTTCATGAGACATTGAAACCACTGA---------------TAGCTCATTTCACCCTATC-TTAAACCCTTCTCTTGTCTATAAAACTAATA---CGGGTCACACCGGACCTTCGGATTAATTGGATCCACATTC-CCCAATGATGTTTGCACCCCATTCAAGATAGCCATGCCATTGTCATTTAACTCGTGAACCTCTCTTTAAAACTAAAATGGATGTGAAAGAAT------AAAATTCAGTGTACTGTAAGTATTCACAGTAATTCTAGTAGAATTAGCTGTCAT-AACATGTTTATTA-TATAATGAGCTGGCATGACACAGAAATATATTTTGTGTTTGTATGACT---TTTATTTTAAATAGGTTAAATCTGGTGCCACTCCATATATAGAGTGCTTTTGAAAAAAAATCAATAAAAAGAAACAAAAAAAATAAAT-GAGTGAATGCAAAATAAGCAACTGTGCCTTTTATACCTGTTGTTACGGTAAAAAAACGGTTGTTGGGTTTGGACAATGAGGGGAAATGGGCTATTCCCAACTTTTTTGATCCTGTATATTTGTCCATGTTTATTTTCTGA-ACATAATAAATAATATATT-AAAAATTTGCCTTCTGACAAACTCAGATAATGGACCAGTCTTAAATATTGTTATGTCATAAAGCAAAGTTAAGGCATTAATATG-----------------------GGCTGCTTA-------------------------AATCTGACTAGAAGATGAAAG--------CGTTTATTGTAAG----TGTAACACAGAGA---------------TACTAT----------CAGGAGTGAAATCAGTCCATTTGGCAAGGTAAAATACTGATTTAGAGTTTTATTCTTTATTTCTTTTTTGTTGTGTTTCTTTCAGCTATGGTTTCATTTTGGTTGTACAGTATATAAACCATATTTGT-TTTCTGTACACAAGACTCTCAAGTGAATTTTGCATGCATTATACATTAGGACACATTTATAAATTAATGAGTAACTATATAAATTTATGTGTATTA-AAACGTCTGTAGCTTCAATCTAAAATCTACTGCTCTTTCTGAATCTCCAG------ATATCATTTCTGTATGGTTTCTGACTGGCCTGCTGCCTGAGTTTCAG-------------AAAACAAGGGAGGCATTATTTTTATG-GGAGGAGGAACTAAGATGGTACTGAGGATGTCTGACTGAAACACTACCCTAGGAAGCTGTCTTGTAGGAAAATAGAATAAAACACACAGACCAGAAGAAA--TTGTCAAGAAGCAAACAGCCATCCAAAAACAGTCATGAGAAATCTAAAGACCTAAATAATCTTAGGTATATGCTCTCAGTGAGAAATAAGAAAATGTGTCCTTAAGCAAAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAAGTGAGCATGATCATGAATATAGTAAATCTTGTGAGTTGTGACCTAGGTGAAGGTGTAATGATAACATCTGGAGGAAGCATCATTTGTTCAGCTACCTAGGGTTTACTTTCAGAC----TTTTCCTACAGTTTAAAGCACTTGCGTTCAGTGTGGTACGATCTGTTTGTAATGTTAATCATTGACTATTGTTCTGCTACTTGGATGTTGATAGTGAAGCAGAGAACAATTTATCATCGTTTATTATGAGTCACTATGCACGCAACTATGCTTAACATGGCGAAATGTATTAAACACTCGTCCAA--CTATTTATGAAATACTTTGCATAATTTAATTTGCTTTTGTACAGTTTTATGTAAATAAATTGCTTGTCATTTTTGTCTCTGCAAATTAAAATATAACATGGTCAAATGGTTTCACACTTGTAAGTGTACTTCTCTGT chr4 - 94230402 20379326 20379325 20381625 73848778 73848777 73851077 2300 ATAATGTAGCTTTGGGTAGTTTC-----------------TTAGAA-ATAACCTTAAACAGCCTATAGTAGAGATTGCTAAATCAATACAACTCATCA---CATTTATCTTTTGAATTCACTTGTCCATTTAGTTGGAGATGCTGTTTCTGGCTGTTCCATTCTCTTCTCT------TAGGTTTACCTTCTTCATGTAACATTAGTTTGTGTACAGCAGTTATGATG--AATGGGCACATTTTTAGAAAGAAAATCAA------AGATTAATAACGATTGAACATTCTTATGTTTAATTATT-TAAGTAATATGAAGACATGCAAACC-AGTACTTTGTTATGAGACTGCAT-AGAGCAGTTACTGCTTTGTATAATCTGTAAGTACCTGTTTA---AAAATGCTTCTAAA-ATGCTTATGTAATGTATACACATTTTT-CTTGCACGTTTCAAC-AGAATACACAATTGCATAATA--AATGTTCAACAGAATTTCCTTTGataaatttttatttaaaattaCACACACAAAAGAAATAGGTAGCTTGGTTCAATATATTGTTAAACCCTTTGACACAAAAGAAATAGGTAGCTTGGTTCAATATATTGTTAAACCCTT----TGTCTTTGACACTAATAATTCAGGTCATAGAAGACCTTCAGATTAAATGGGTCGGCAGTCACTCACCGATTTTCACACCACATT-AAGACAGTCATTAAAT----ACTTTACCTGTGTGCATCTCCTTAGAACTAAA-TGGGTGTGAAAGAATTTTTTTAAAGTTCTATCTACTGTAAGTATTCACAACAATTCTAGTAGAACTAGCCACTATTAACATGCTGATAACTCTTCTGACCTGGCATGACACACAAATATACTTTGTGTTTGTATTTCTCTTTTTATTTTAAATAGGTTAAATCTGGTGCCACTCCATAAATAGAGTGCTTTTGtataaaaataaataaac-----tataaaaaataattaGGGTGAATGCAAAATATGCAACTGTGCCTTTTATACCTGTTATTATGGTAGAG---TGGTATTTGGGTTTGGACACAGAGGGATAAGGGGCTATTCCCAACTTTTTTGAACCTGTATATTTACC--TGCTTATTTTCTGAGaaattataaataatatatttaaaaaCAAGTCTTTTGCCAAACTCAGTTAATGGACCAGTCTTAAGCATTATTG-------ACACAATGCTGTGGTTTAAATATGTCTTGAAGGTTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTAAATTAATCTTTGTGGGGGGTCTTGGATTGTCTTCGTTTGTTTTTTAATTCTGCAGCCTGGAGAACAATGATCAGTCTATACTATAGTTGTTTAGCAAG-GTGTCACCAGTTCATGTTGCCAGGAAAATTATCAAACAA---------------TTTCTTTTTAATTG-----CTTTTTGCTGCCATCACATTTCAGTTGTACAGTACAGAAATCATCTTTTTATTTCTTTCCATGGTAAACTCGAATGAGCTTTGCATGTGTTTTACATTAGGGCACCTTTATAGATTGATGCATTAATATATAACTTTATATGTATTAGAAAATTCAATAGCTTTGGTCTAAAATCTAATGCTCATTTTGGATCTCAGATCCACTATGTTTATTCAACATGATTTCTGACTGGCCTGCTGCCTGAGTTTCAGGAAAAAAAAAAAAAAAAAAAGGTAAACATTATTTTTATGTGGGGGAAGAATTTAAATGGAATTCAG-ATGATTGACTGAAAGGCTACCCTAGGAAGTTGTCAAGTAGGAAAGCAAGA----------AGTATAGTTGAAGGCTTGCCAC-AAGCA--CAGCTATCACCAAACACTTGTAAGAACT-TGAACAGTGAAATATTTTTCCTTTTCTTTCATTGGTGATAAATG-TACAGTGTTTCCTTAAGGAATGA--------------AGCAGATGAAATAGCAATAGAGATAAAATTCCATCAGTTAAGTTGTA----TTATTGACTG----------AAAAGCATAA-----ACACAAGAAAGAAGAAAAATTTAC-CAGCTACCTAGGGTATGCTTTCAGACAAGTTTTTCCTAAATTTTAAAGCACTTGCATTCAGTGTGGTACGATCTGTTTGTAATATTAATCATTGACTATTGTTCTGCAACTTGGATGTTGATAGTGAAGCAGAGAACAATTTATCATTGTTTATTATGAATCACTATGCACGCAACTATGCTAAACATGGCAAAATGTATTAAACGCTAGTCCACCTCTATTTATGAAATA-TTTACATAATTTAATTTGCTTTTGTACAGTTTTATGTAAATAAATTGCTTGTCATTTTTGTCTCTGCAAATTAAAATATAACATGTTCAACTGGTTGCTCATTTGCTAGCGTACTT-TCTGT .:.....................-----------------.....x-....xx.x.x.......:x.:..x..:...x...x...x..:.:x..x...---:.:........x:..x:.:...x..::...:..x..:x.::x.-..xxx..:::..:.x..x.x:...:.------.:.:x..x:.x.:..x....-----......:....:.::..x..x....--..x:.::.::.xx..::..x:....x..x------.:.x..x:.:::.........x:........:......-.xx::.x....:.:.x......x:.-............x..:.......-.:.......-....:.....................:..x.---.....:........-..:......x.................-..........x...x-.:.....x...........:.--:.....::...:.x...-----------.....x.....--------------------.:x:.xx...xx..:x..:x:x::..:..x..x:...---------------.....::x....x:x...:-..........----.....x.:.x.......---.:.....:.xx:.......:......x...:..x:..x..-.:..x:...x..::....x....-....:..:...xxx..----.:..x..::...x:.x....:...:.......-...:...........------...:...x:.x.................::.............:....::::..-......:.x..x.-.x.xx...x.............x.......:.............xx..---.....................................x..............x.x......x......x-----:.x.........x.-.:..............x........................:...:....:.:---:...xx.............xx.....:x..x......................x...........::.--..:...........-.x..x..............-.....:xx.:...:..x.........x.................::...:..:-------.x:...x.:.:x..:x.x......-----------------------.x:..:..:-------------------------.....xxx.:.::.:.xxx:.--------.....:..x.xx:----..:.:.x::....---------------......----------..:.-...xx.:....:...x.x..x...x...x..:::.x:x.---------------.........x:...-----....:x...::x:.:x.....::...........:.x...:...x...x.-.....x.x..:::x.xx...:.:...::........::..x.........:...x......:...:...x:.x.x.......x.....:.......-...xx..x:......:::...........x.....x..:..:.....x::------..:.:xx...x::...:..............................-------------....x....x.::.............-..:...:...:.x.:....x.:.x..-...x:.........x:.............:....xx........::.::.----------..xx:..xx...:--...:..x-.....--....:...xxx.....x.::.:....x.-.:..x.x:x.....x.:..xxx.x.x.x::x.::....x....:-x.x.:...x........x..x:.--------------.::.:..:..xx.::....:.:.xx:.::x:x....xxx.x:.x...----..:.x:::..----------:..:.::...-----...:xx.:.:....x.xx....::-..............x.:.........----........x.x..............:...........................:.......................x.......................................:...........:......................x........:.............:..x.....x--..............-...:.................................................................................x....x.....x.x..:...:x..:......-..... 23M17D6M1D51M3D43M1I26M6D20M5I25M2D29M6D38M1D25M1D23M1D9M1I31M3D14M1D27M1D15M1D21M2D17M11I11M20I37M15I19M1I10M4D17M3I40M1I23M1D16M4D32M1D15M6I54M1I13M1I48M3I69M5D14M1I53M3D68M2D14M1I19M1I53M7D24M23I9M25I21M8I13M4I13M15I6M10I4M1D39M15D14M5D50M1I96M1I50M6I47M13I26M1I26M1D50M10D13M2I7M1D5M2D28M1D44M1D23M14D47M4D10M10D10M5D24M1D26M4I185M2I14M1D116M1D5M 1628/2113 77.0% 2300/94230402 0.0% 333/2113 15.8% 10765242 NA +13025 chr4 + 190214555 31149239 31149238 31149624 386 AGCAGCTTTATTTTAATGGAAATTTACAAT--ATCAGCTAAATTGAGCTCTTAGGAAACAGAGTGAATAGGGACTGAACTTATGTTTGTTTATTTT--CTCTTATCTTTATCCTTTACTCTAATACTTGTTTATAAACTGCATGAAGGAAGGTGATTA--GCCAAGATAATATAAATTTTCTAAGCTGCAGGGAGTGAGGAATGGCTATGAATGTAAAATGTGGAAAGCTA----TTTATGCTTTCCTTTAACCCTTATTTTATTTTTTCCTGTTGTGTTTGGGTTAAATGTAAATTGTATTCATTTGTTGATTTTAATATGTGTGACCCACACAGAAATAATTTTA----TTTATTGAACCTCCTGTGG----------GAAGATGCTTAATAGTTTATAAATATAAAA chr4 - 94230402 20382770 20382769 20383166 73847237 73847236 73847633 397 AGTAGCAGTATTTTAATGAGTAACTTCAATCAAGCTTTCATGTTTATTTTATACTAGATGTAGTATGCAAGGCATGACCTTATGTTTGTTTATTTTGTCTTTTATCTTCATTCTT----------CTGGTTTACCGACTGCATTCAGGAAGGTGATTACAAGGAAGATAAAATAAATTTCCTGAACTGCAGAGTGGTAAGAGAGGATA---ATATAAACTGGCGAAAGCTAACAATTTATGCTCCCCTTTAACCCTGGCTCCATTTCTCCCTCTTCCACTGCAGTAAAATGTAAATCTTATGCAGAGACTGAAATTAATAAATGTGACCTAGGCAGAAATAATTTCATGTCTTTATTGAGCCTCCTGAGGGGAGTGCATAGAAGATGGTTAATAGTTCATAAATGTGCAA ..:...xx..........::x.x:.x....--.x.xx::.x:..x.x:.:x..xx.:.::x...:x::.:..xx...x..................--..:.......:..:...----------..x.....:x:.......xx.............--:xx.......x........:..:.:......:.x.xx.:..:x..x..---..:....x..xx........----........::...........x::.::....:.:...x..x:::.xx:..x..........:x...x..xxx::...xx......x:.......:.x:............:.----........:.......x..----------.......x.........:......:.:x.. 30M2I64M2I17M10D33M2I48M3D20M4I112M4I19M10I30M 269/373 72.1% 397/94230402 0.0% 37/373 9.9% 10766469 NA +3818 chr4 + 190214555 31154816 31154815 31155000 185 TCTACATTC--TTCAGCTTTGGGACTCAGACTGACTTCCCTGTTTCTTAGCTTGCAGATGGCCTATTGTGGGACCCTTGTGATTTCATGAGTTAATATTACTTAATAAACTCATATATATATATATACACACACACACACATATATA------------------------------------CGTATACATACATACACACACATATATACGTATATATATG chr4 - 94230402 21704572 21704571 21704785 72525618 72525617 72525831 214 TCTACCTTTGATGCTGTTTTGGA--TCAGA--AGCTTTGATGCCTCCCTGTCAGCAGAAGGCTTTTTCAAAG-----TGTGTCATTATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATG .....x..:--.x.x.:.....:--.....--::...:xx..::..::x.::x.....x...:.x..xx::.-----....x:x.:..::xxx...x.:...x:.x..x..:........:..:.:..............:.:....------------------------------------:x.......:x...:.x.x.:.......:......:.... 9M2I12M2D5M2D40M5D70M36I40M 119/176 67.6% 214/94230402 0.0% 47/176 26.7% 9450244 NA +3818 chr4 + 190214555 31154816 31154815 31155000 185 TCTACATTC--TTCAGCTTTGGGACTCAGACTGACTTCCCTGTTTCTTAGCTTGCAGATGGCCTATTGTGGGACCCTTGTGATTTCATGAGTTAATATTACTTAATAAACTCATATATATATATATACACACACACACACATATATA------------------------------------CGTATACATACATACACACACATATATACGTATATATATG chr4 - 94230402 21700999 21700998 21701212 72529191 72529190 72529404 214 TCTACCTTTGATGCTGTTTTGGA--TCAGA--AGCTTTGATGCCTCCCTGTCAGCAGAAGGCTTTTTCAAAG-----TGTGTCATTATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATG .....x..:--.x.x.:.....:--.....--::...:xx..::..::x.::x.....x...:.x..xx::.-----....x:x.:..::xxx...x.:...x:.x..x..:........:..:.:..............:.:....------------------------------------:x.......:x...:.x.x.:.......:......:.... 9M2I12M2D5M2D40M5D70M36I40M 119/176 67.6% 214/94230402 0.0% 47/176 26.7% 9453817 NA +3529 chr4 + 190214555 31154926 31154925 31155034 109 ATATATATATATATACACACACACACACATATATACGTATACATACATACACACACATATATACGTATATATATGTGTATATATATACATAT---ATATACACACACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:...................x:x.:.....:..:x:x::x.:....:::..xx.x:.:.x..x....::::....x...x:....---.:.x....xx....... 92M3I17M 72/109 66.1% 112/94230402 0.0% 3/109 2.8% 26737583 NA +4068 chr4 + 190214555 31154937 31154936 31155071 135 TATACACACACACACAC-----------ATATATACGTATACATACATACACACACATATATACGTATATATATGTGTATATATATACATATATATACACACACATATATATACGTATATATACACACACATATATATGTATATCT chr4 - 94230402 73121075 73121074 73121218 21109185 21109184 21109328 144 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATA--CGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTT .:.....x....x.x..-----------:.::..:.:...x......:.:.:.....x.x::.:.x:..:...--:.....x:..:..:x:.....:::x::.......x.....:x:.:.x.x........:....x.:.x..:. 17M11I45M2D71M 87/133 65.4% 144/94230402 0.0% 13/133 9.8% -41966138 -52264264 +3004 chr4 + 190214555 31154942 31154941 31154992 51 ACACACACACACATATATACGTATACATACATACACACACATATATACGTA chr4 - 94230402 14763519 14763518 14763569 79466834 79466833 79466884 51 ACAAGCACACACATAGATACATATAAATACATACACAAAATTACATACATA ...x:..........x....:....x...........x.xx..:....:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 16391423 NA +3091 chr4 + 190214555 31154951 31154950 31155017 67 CACATATATACGTATACATACATACACACACATATATACGTATATATATGTGTATATATATACATAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..:....:......:...:.............:....x::x:.x:.x:...:..:.xx:....::.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -35749895 -58480507 +3200 chr4 + 190214555 31155006 31155005 31155063 58 ATATATACATATATATACACACACATATATATACGTATATATACACACACATATATAT chr4 - 94230402 17520753 17520752 17520810 76709593 76709592 76709650 58 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .......x.:.:.x.......:....:.:x..:.x.:....x.....::......... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 13634253 NA +3631 chr4 + 190214555 31155010 31155009 31155141 132 ATACATATATATACACA---------CACATATATATACGTATATATACACACACA---------TATATATGTATA-------TCTACACACACGTATATATACATATATACACATATATCTATGTGTATACA--CACACACATACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTAT----GTATATACAGCCACACACATGCACACACACACAC ...x..:....x.:...---------...x..:.x.x.:.:..x.:.....x..x.---------.::..x.:....-------.x.:x.....x:...:.x.:.:.:.::....:.:...----..:......--.........:............. 17M9I30M9I12M7I37M4D9M2I23M 94/128 73.4% 155/94230402 0.0% 31/128 24.2% 16190280 NA +3547 chr4 + 190214555 31155019 31155018 31155172 154 TATACACACACA-----TATATATACGTATATATACACACACATATATATGTATATCTACACACACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACACACACACATATATGGTCTATTAGTTCTC chr4 - 94230402 73121075 73121074 73121229 21109174 21109173 21109328 155 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTA----CATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTC .:.....x....-----.:..xx:x...:.::..:..:.:x....:.:..:..:.:xx.x:..::x...:...:::...x:.....:x:...x.:..x...----..:.:.x....:.x....x.x.......:::.:.x::.x:x.::x...x..:.. 12M5I84M4D54M 90/150 60.0% 155/94230402 0.0% 9/150 6.0% -41966056 -52264346 +3233 chr4 + 190214555 31155033 31155032 31155144 112 TATATACGTATATATACACACACATATATATGTATATCTACACACACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.::.:.:....x:.:.....:...:.:.x:x::..xx::...:.......x:....::x:..:.::.:x:.x:..:.:x....:.x....x.x.......:::.:.x:.. 112M 64/112 57.1% 112/94230402 0.0% 0/112 0.0% -41966069 -52264333 +3184 chr4 + 190214555 31155046 31155045 31155152 107 ATACACACACATATATATGTATATCTACA----CACACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACACACACACA chr4 - 94230402 89016082 89016081 89016192 5214211 5214210 5214321 111 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACA ..:::.......x.::...:.:.:x:..:----.:...::.:..::.x..::......:..x..x.:....:.x....x::.:..:....:x.::.:::.x..::x:.... 29M4I78M 63/107 58.9% 111/94230402 0.0% 4/107 3.7% -57861036 -36369366 +3049 chr4 + 190214555 31155054 31155053 31155110 57 ACATATATATGTATATCTACACACACGTATATATACATATATACACATATATCTATG chr4 - 94230402 32959573 32959572 32959629 61270774 61270773 61270830 57 ACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATG ..x....:...x:.:...::::..::.::................x......::... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% -1804519 -92425883 +3280 chr4 + 190214555 31155058 31155057 31155156 99 ATATATGTATATCTACACACACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACACACACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAAT----------------ACACACACACACACACAGACACAAATGAATA ..:.:.....:.x.:..:.x..:.:...x.......:..::.x..:..:x..----------------.:...............x.....x.::x... 52M16D31M 60/83 72.3% 83/94230402 0.0% 16/83 19.3% 22759270 NA +3731 chr4 + 190214555 31155075 31155074 31155157 83 CACACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACACACACACATATAT chr4 - 94230402 8395787 8395786 8395869 85834534 85834533 85834616 83 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ..:::..:...:.::::...x...::...x.x:..:.....:.x:...:xx...................x.....x..:x.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 22759288 NA +3738 chr4 + 190214555 31155077 31155076 31155155 79 CACGTATATATACATATATACACATATATCTATGTGTATACACACACACATACACACACACACACACACACACACATAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:..:.:...:::.::...x....:...:..::.:.:..::.x:...:xx.:.................x.....x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 22759290 NA +3293 chr4 + 190214555 31158091 31158090 31158219 129 CTCCTGTGTTGTAAAATTAGTCAGTAAGGGTATCATATATGT--CAAAACTTCTTCCATCTAAACTTAAGTAGGCTAACTAAGAGAATAAGGTCTCTGATTTGCATTTTGCAAAAACGGAACTCTACTAAT chr4 - 94230402 25462808 25462807 25462937 68767466 68767465 68767595 130 CCCCTGAGACAAGACATAAGTCAG-AGAAGTGTTATCTGTGTTTCAAAACTTCATCAACCACCATTACAGCAGGCAATTTACAACAGTAAGCCCACTGAATTCCATTTTACTACAGCGAAACTGAACTAAT .:....x.x::x:.x..x......-.:::..:.:..x.:...--.........x..x.:.xxx.:.xx..:....x.x:..x:.x.:....x:.x....x..x......:.x.x.:..:....xx...... 24M1D17M2I87M 83/128 64.8% 130/94230402 0.0% 3/128 2.3% 5695283 NA +3193 chr4 + 190214555 31171318 31171317 31171362 45 TATATATATATGTGTGTGTGTGTGTGTGTGTGCCTTTATTATGCT chr4 - 94230402 27034826 27034825 27034870 67195533 67195532 67195577 45 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCT ...........................:.:.:.....x..x.x.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 4136492 NA +3044 chr4 + 190214555 31180246 31180245 31180289 44 GTTTACATACACACACACACACACACACACACACACACATATTT chr4 - 94230402 66904841 66904840 66904884 27325519 27325518 27325562 44 GTTTTCATATATGTACGTACACACACATACACACACACATATTT ....x....:.:::..::.........:................ 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% -35724595 -58505807 +3329 chr4 + 190214555 31195321 31195320 31195432 112 TCTTTTTTCTCAGTGAAAATTTAAGGATATTTTTAAGAGAGAGATTTGGAGTTTTT-----TTTTATTTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGTTTTGAAACAGTGTCTCT chr4 - 94230402 28772421 28772420 28772530 65457873 65457872 65457982 110 TCCCTTGTCTCCATTGAAAATTAGGTA-------AAAACAGAGCTTTTAATTTTAGGTGGATTTTGCTAGTAGTTTCTTTATTTTTATTTTTGTTGTTGTTGTTGCACAGTGTCTCT ..::..x....x:.x:...x...:.x.-------..:.x....x...x:.x...xx-----....::.x..x....:...x.....:..x...........x.x:x........... 27M7D22M5I56M 75/105 71.4% 110/94230402 0.0% 12/105 11.4% 2422900 NA +3626 chr4 + 190214555 31195374 31195373 31195418 45 TTTTTTTATTTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGTTTT chr4 - 94230402 76612835 76612834 76612879 17617524 17617523 17617568 45 TTTTTTCATGTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGGTTT ......:..x...............................x... 45M 42/45 93.3% 45/94230402 0.0% 0/45 0.0% -45417461 -48812941 +3089 chr4 + 190214555 31203683 31203682 31203735 53 ATATATATACATATATGTACATGTATATGTATATATGTATGTACATAT-ATACA chr4 - 94230402 58924594 58924593 58924647 35305756 35305755 35305809 54 ACATATATACATGTATGTGCATGTACATCTATATAAGTATGTAAACACGATACA .:..........:.....:......:..x......x.......x.:.:-..... 48M1I5M 44/53 83.0% 54/94230402 0.0% 1/53 1.9% -27720911 -66509491 +3047 chr4 + 190214555 31203696 31203695 31203763 68 TATGTACATGTATATGTATATATGTATGTACATATATACACATATATATACATATATGTACATATATA chr4 - 94230402 88029573 88029572 88029640 6200763 6200762 6200830 68 TGTGGACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATA .:..x...xx.....x...:.:..x.x:....:.x.:.:.....x...:.........:...x.x... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -56825877 -37404525 +3416 chr4 + 190214555 31203716 31203715 31203786 71 TATGTATGTACATATATACACATATATATACATATATGTACATATATATGTGTGTGTGTGTATATATATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:..:::.:......:.....:.x..........x.x.::..::..:...x..::....x....:.:.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -40426419 -53803983 +9796 chr4 + 190214555 31205049 31205048 31205282 234 CCAGGCCCTGAAACATTCAAATGTGATAAAAATCAATTTTACCTATGTTATTCCCAGCTGAATGCCACTTCTGATGTACATCAGCTTCAAAAGAAATTAAGAGATAAGTAACATGATTACAATCAGATTAGCTTGTCTAGGCAGACAAATGAGATTGCAGAGTTGTCTGAGTGAAGAT---GCTTCCTAGTGTATTCCTAGAGACCAGTTTGCATCACATTAAACAAAAATGAGTTT chr4 - 94230402 20414307 20414306 20414532 73815871 73815870 73816096 226 CCAAACCTTGAAATGTTTAAATGTGATTAAA-TTGATTAAATATATGATATTCCCACCTGCATGTCATTTCTGATGTACATCTGCCACATACAAAATTAAAAGCTAAGTAACAAGATTACAATCAAATTAGAGAGCTTATGCAAGTAAATGAGATTGAAAATCGGTGTGAGTGAAAACTGAACTTTCTAGT---------GAGACCATTTTGTATCCTGTTGGAT-AAAATGATTTT ...::..:.....::..:.........x...-.::...xx.:x....x........x...x...:..:..............x..:x..x.x:.......:..x.........x...........:.....xxx.::..x...:::...........x.:.x:x..x........:.:---:...:.....---------.......x....:...x::..::.:-.......x... 31M1D146M3I10M9D25M1D11M 167/223 74.9% 226/94230402 0.0% 14/223 6.3% 10790742 NA +9599 chr4 + 190214555 31239605 31239604 31240101 497 CCAGTTGCTGCACTGTAATAATGGTTTGCCTTTATTTATGCACCTACCCATTGTTTTTGAAGTCAGGTAATAGCAGCAAATCAAATGGCATATTCTCATTCCGTGTCACACATCTTACCCCTTAAGCATTAGGATAAACAGATGTGGCTTCGCCAAAGCTGTTGTCAGCAATACACTACTTCCAGTGACAATAAATTTTTCCACTAATGATATTAGGTAGTAGAATTGGTGTTTTGCACTGTCTTTT-CCCACTACTCTA-TTTTAAGGCAATGCCTTTGTAAACAAACACTTATATAATGCAAGGTATTACATGGTGTGAAATAGGCTTGATCCATTAGTATGTTGTGAAGTTGG----GGCTTAGGAAAATAAAAGAATATAATGTGATCAGTACAGCAAGGGAAAGGAAC------ATTCTGTGCAACATAAACAACCTGACAAAAGGCAGGATGGCTTAGTTTTATTTATAAAAGCCTTTACATGCTCCCACATTTATTAAAACA chr4 - 94230402 20425785 20425784 20426267 73804136 73804135 73804618 483 CCTGTAGTTTCACCGTAAT---GATTTCTCCTTTTTTGTGTGT-TATCCATCGTCTTTCAACTCA-----TAGCTGGAAATCAAATAATATCTTCTCATTACCTGTCACTCAGCAT----TTCAAGTACTAAATGAAACAGATCTGGCTTTGCCAAAGTAATTTTCAGCAATATTGTCCTTTCTGTGTCGACGAATTTACCCATTAATAATA-TGCCTGATAAACTTGGTCTGTTCCTTTATTTTTTCCCCACAGTTCTATTTTTAAGGCAACAAAC---TGTATAAATATTTCCATAGTGTTAGACTTAACATGGAAAGAAGTAGTCTAG-CCCACTA--ATGTTACAAATTTTGCAATGAAATGAAAAAATACAGAAAATTGGCTTCATTGGTTTAAAAAGAGAAAGAAGAAACATGATAGTGAAGAACACTAATGGTCTCCAAGGAAATAGTGTGG----ATATTATTTTTTAAATTACT--CATGTTTCCACCTTAACAACAACA ..x..x.:.x...:.....---.:...x:.:..x...:..:::-..:....:..:...x..x...-----....x.x.........:::..x........x.x......x..x.x.----:.:...:.:..::xx........x......:.......:x:..x.........:xx.x...:.x...x.:.::.....x:...:....:...-.:xx.::..:.x.....x.x..x.x:.:.:....-.....x::....-...........::xx:---.:x.:...:.:..x:...:..:x..::x.x......x:x...:...x..x.-:...:..--.....:::..x..x.----.:xx.:::......x.::..xx.:::x.x..::..x:.:x...:.....:.:x------..xx..x:x....:x..::::..xxx.::.:::..x:...----:.x......x.x...x:x:.--....:.:....x..x.:x.x.... 19M3D21M1D21M5D46M4D92M1D34M1I12M1I16M3D51M1D7M2D15M4I53M6I40M4D20M2D24M 302/471 64.1% 483/94230402 0.0% 38/471 8.1% 10813820 NA +9738 chr4 + 190214555 31239605 31239604 31240102 498 CCAGTTGCTGCACTGTAATAATGGTTTGCCTTTATTTATGCACCTACCCATTGTTTTTGAAGTCAGGTAATAGCAGCAAATCAAATGGCATATTCTCATTCCGTGTCACACATCTTACCCCTTAAGCATTAGGATAAACAGATGTGGCTTCGCCAAAGCTGTTGTCAGCAATACACTACTTCCAGTGACAATAAATTTTTCCACTAATGATATTAGGTAGTAGAATTGGTGTTTTGCACTGTCTTTT-CCCACTACTCTA-TTTTAAGGCAATGCCTTTGTAAACAAACACTTATATAATGCAAGGTATTACATGGTGTGAAATAGGCTTGATCCATTAGTATGTTGTGAAGTTGG----GGCTTAGGAAAATAAAAGAATATAATGTGATCAGTACAGCAAGGGAAAGGAAC------ATTCTGTGCAACATAAACAACCTGACAAAAGGCAGGATGGCTTAGTTTTATTTATAAAAGCCTTTACATGCTCCCACATTTATTAAAACAT chr4 - 94230402 20423492 20423491 20423975 73806428 73806427 73806911 484 CCTGTAGTTTCACCGTAAT---GATTTCTCCTTTTTTGTGTGT-TATCCATCGTCTTTCAACTCA-----TAGCTGGAAATCAAATAATATCTTCTCATTACCTGTCACTCAGCAT----TTCAAGCACTAAATGAAACAGATCTGGCTTTGCCAAAGTAATTTTCAGCAATATTGTCCTTTCTGTGTCGACGAATTTACCCATTAATAATA-TGCCTGATAAACTTGGTCTGTTCCTTTATTTTTTCCCCACAGTTCTATTTTTAAGGCAACAAAC---TGTATAAATATTTCCATAGTGTTAGACTTAACATGGAAAGAAGTAGTCTAG-CCCACTA--ATGTTACAAATTTTGCAATGAAATGAAAAAATACAGAAAATTGGCTTCATTGGTTTAAAAAGAGAAAGAAGAAACATGATAGTGAAGAACACTAATGGTCTCCAAGGAAATAGTGTGG----ATATTATTTTTTAAATTACT--CATGTTACCACCTTAACAACAACAT ..x..x.:.x...:.....---.:...x:.:..x...:..:::-..:....:..:...x..x...-----....x.x.........:::..x........x.x......x..x.x.----:.:.....:..::xx........x......:.......:x:..x.........:xx.x...:.x...x.:.::.....x:...:....:...-.:xx.::..:.x.....x.x..x.x:.:.:....-.....x::....-...........::xx:---.:x.:...:.:..x:...:..:x..::x.x......x:x...:...x..x.-:...:..--.....:::..x..x.----.:xx.:::......x.::..xx.:::x.x..::..x:.:x...:.....:.:x------..xx..x:x....:x..::::..xxx.::.:::..x:...----:.x......x.x...x:x:.--....:.x....x..x.:x.x..... 19M3D21M1D21M5D46M4D92M1D34M1I12M1I16M3D51M1D7M2D15M4I53M6I40M4D20M2D25M 304/472 64.4% 484/94230402 0.0% 38/472 8.1% 10816113 NA +3182 chr4 + 190214555 31240536 31240535 31240588 53 TTATAATGTTTCCTCCTCTTCCTCTTTCTTATTTTCCTTTCTCTTCTTTTTTC chr4 - 94230402 35294604 35294603 35294656 58935747 58935746 58935799 53 TTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTC ..::.x.:....:..:..:.::x................:......x...... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -4054068 -90176334 +3059 chr4 + 190214555 31250099 31250098 31250168 70 GTCTCAAATAAATAAATAAATAAAACAAAAACAAAAACAAACAAACAAACAAAAAACCCAGAACATTAGA chr4 - 94230402 46805550 46805549 46805619 47424784 47424783 47424853 70 GTTTGAAGAGATTAAATAAAAAGAGTTTAATTAAAAACAAACGAACAAACAAAAACCTCAAAATGTAAGA ..:.x..:x:.x........x.:.::xx..x:..........:............x.:..:..::.x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -15555451 -78674951 +3009 chr4 + 190214555 31250109 31250108 31250157 49 AATAAATAAATAAAACAAAAACAAAAACAAACAAACAAACAAAAAACCC chr4 - 94230402 10852600 10852599 10852648 83377755 83377754 83377803 49 AATACAAAAACAAAACAAAACCACTGACAAACAAGCAAACGAAAAACCC ....x.x...:.........x..xx:........:.....:........ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 20397509 NA +3006 chr4 + 190214555 31272111 31272110 31272151 41 TATATACATACATATTTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704285 19704284 19704325 74526078 74526077 74526118 41 TATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT .......:..:..........:...x::............. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 11567826 NA +3013 chr4 + 190214555 31273648 31273647 31273702 55 TCATAATTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 70490188 70490187 70490242 23740161 23740160 23740215 55 TCATAGTTACTTTCTTACATTTTTACATCCTTTTTTTTTTTTTTTTTTCCCCTCT .....:..x.......x.x..:..x.x.:...................::::.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% -39216540 -55013862 +3417 chr4 + 190214555 31282598 31282597 31282659 62 GTATATGTATACACACATACATGCATAAACACACACATACATGCACACACACACACCATGGA chr4 - 94230402 14964829 14964828 14964890 79265513 79265512 79265574 62 GTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGA ..x.::..:.:.....:.::...:...x...xx....:..................::.x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 16317769 NA +3068 chr4 + 190214555 31288282 31288281 31288353 72 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAGAGGACTCCA chr4 - 94230402 68107291 68107290 68107362 26123041 26123040 26123112 72 TCTCTCTTAAAAAAAAAAAAATCCTCTCAAAAAAAAAACAAAAAAAAACAACAAAACACACACAGAAATCTA ..:x...:.............xxxxxxx..........x.........x..x....x.:...x..:.x..:. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -36819009 -57411393 +3038 chr4 + 190214555 31288291 31288290 31288362 72 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAGAGGACTCCAAAAGGAAAA chr4 - 94230402 66946945 66946944 66947016 27283387 27283386 27283458 72 AAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTTTTGAAAGAAAA ..:x....x:...x.x........:...:........:.::.:..x..xx.x.x......::x:..:..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -35658654 -58571748 +3146 chr4 + 190214555 31288300 31288299 31288363 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATACAGAGGACTCCAAAAGGAAAAT chr4 - 94230402 20475871 20475870 20475934 73754469 73754468 73754532 64 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACAT ...................:..::..:x..::x.::....:.:.x....x:x:........x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 10812429 NA +3672 chr4 + 190214555 31303837 31303836 31303918 82 CTGCAACCTCCGCCTCCTGGGTTCAAGCGGTTCTCCTGCCTCAGCCTCTCCAGTACCTGGGACTACAGACATGCACCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGT ..:..:..:xx:x..:...........:.x...x.xx.x........:..x....x....:.....--..:........::. 66M2D14M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% 13106711 NA +18518 chr4 + 190214555 31311616 31311615 31312010 395 TATTCCTTCAATAAGGCTAAAATAAAAGATGCAAGGAGAAACATATGATATAGTTTACTATTATAGGCTTTAAGCAGTGCCTTGAAAATAACTCTAATTAAAGTTGCCGTTGCTCTGACCTGATTAGACAGAGAACAATAGTACTGTTACTCTTTGTCTACCTTAGGATAGTAAGTAGTTGATGATTTATAATATCTTTTGACAGCCACGTTAATTATAACTTAGCTGAATGTTTTCCTTTAGAGTAGAATTTTTTAAAA----CAAAAGAAGAGGAAATTGTAGTGAAAGCTGTCAGAATATTTCTGAGTATTGCTAATGACTGTATCCAATAGCTAAGAA--ATGGTAACTTTTCTTGAGATTTTTCTCTTATTTTTTACATTGCACTCAACATATTTT chr4 - 94230402 20451990 20451989 20452378 73778025 73778024 73778413 389 TATCCCTTATACATGGCTAAGAGAAAAACTTCAAGAGCTGACATACGACAGGGTTTG---TTGCAAGCATTAAGCAGTGTCTTGACAATAACTATAATTAAAGTTGCCACAGCTTTGACCTGATTAAACACTGAACAATACAACTGCCACTCTTTGACTACCTTAGGCCGGTGAACATCTGATGATATATAATATCTTTTGGCAGCCAAGTTAATTATAACATAGCTGAATGCATTTCTTTAGAGGGGAAATATTTAAAGAAATTAATGGGAGAGGAAACTGTAATGAAAGCTGTCAGAATAATTCTAAATATTGTTAACAAGCATATCTAATATCTCTGAAGTATGCTAACTTTTC---------TCCTTTTGCCTATTATGATGCATTCTTGACACTTT ...:....xx.:.x......:.x....:x.x....::xx:.....:..:.x:....:---..::.:..x..........:.....x.......x..............::x...:...........:...xx........xx....::........x..........x::..:.::.x:.......x..............:......x............x..........:x..:........x:...x.x......:----:..x:.:........:....:.................x....:.:.....:...::.x::....:....x..xx...--...x.........---------.:..:..:::.x...::x....:..xxx.:.:... 57M3D200M4I78M2I13M9D35M 289/383 75.5% 389/94230402 0.0% 18/383 4.7% 10859626 NA +3587 chr4 + 190214555 31315533 31315532 31315593 61 CTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.............x...x.xx.x........::::.........:......x.x.... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 13118394 NA +18232 chr4 + 190214555 31339920 31339919 31340286 367 ATCAAACTTTCTTAAAACCATGTTGATATTTGACTCATGAAATGCTATTTGTG----------GTGTATGATCAGTATAGAGGAAACAGATTGTTTCTTTTTTTATTTTTATTGTGTACTTGTTAATCTATGTCTAAAGGTATTATGCTAATTATAACACTACTCTTCACATTCAGAATCCAAATTGCTCATTTTCAAGTTTTTCTTTTTTTTTCAAATTGTAATCTGTTAATTACTTGTTTAATGGAGTGTGTAATTACCTACTTTAAGTTAGAAAACTGTTTCCATTTCAAAGAGAGAAACCTATTTTAGAAATGAAAGAATATAAATGCAATCCATTC-GATATAGAATATAACCCTTTACTTCCCTTAATGATC chr4 - 94230402 20462196 20462195 20462560 73767843 73767842 73768207 365 ATTAGGCTCTTCTAATCCCATGGCATCATTTAGCATATAAACTGTTATTTATTTATTTATTTTGCACATCATTCAAATAAAGAAAACGGGTT-----TTTTTTAATTTTCATTGTGTATTTGTTAATCCATTTCAAAAAGTATTATGCTAATTATAACAGTGTGCTTTGCGTTTAGCAACTGAATTGCTCATTTTCAAGTTTTTTTTTTTT-----AATTGTAATCTGTTAATTACTTGTTTAATGGAGTGTGTAATTACCTACTTTAAGTTAGAAAACTGTTGCCATTTCAAAGCAAGAATCTTGTTCTTGAAATGAAAGTATGTAAATGCATTCCTTTCAGATATTGTGTATAACAATT---TTGCTTCAATAGTC ..:.::..:.::...xx.....x::x:....::.x:..:..x..:.....:.x----------.:::..x..:x:x...:..:....:.:..-----......x.....:........:.........:..x..x...:....................x.::x...::.:..:..x.x.::......................:......-----...................................................................x...........x:....x.:.:..:.x..........x..:........x...x...-.....x.x:......xx..---..x.:.:...::.. 53M10I29M5D114M5D125M1I19M3D14M 278/354 78.5% 365/94230402 0.0% 24/354 6.8% 10877724 NA +3347 chr4 + 190214555 31358467 31358466 31358520 54 AATATATATATATACACACACACACATATATATGTGTGTGTATATATATATTCT chr4 - 94230402 61485372 61485371 61485425 32744978 32744977 32745031 54 AATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCT ......:...:.........::....:x.:.:...:...:.:...x........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -30126905 -64103497 +3299 chr4 + 190214555 31363212 31363211 31363296 85 AAAAAAGTTTAGGAAAAAACATAAAACCATTATCAAAAAATTAAAAACAAGAAAGAAACAGAAAGTTTGTTATTTTATGAGAAAT chr4 - 94230402 78175689 78175688 78175773 16054630 16054629 16054714 85 AAAAATGCAGAGGGAAAAAAAAAAATCCATAATAAATAGATCAAACAGCAGTGAGAAACAGAAAGGTGGTAATCTTGAGAGAGAT .....x.:xx...:.....x.x...x....x..x..x.:..:...x.xx..x:............x.x..x..:..:x....:.. 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% -46812477 -47417925 +9687 chr4 + 190214555 31397300 31397299 31398170 871 CTTTTTAAAAATGCAAAAATGGAGTAAAACTCTTTAGATATTAGAAGTATTGTTTTACAGTCAAT-AAAAGGTCGGGGGGGCTTTTG--TACTAAACAAGTCTCATCAGGGTAGTTCATTAACACAATTAGACAAAATGCGTTCTCCAGTTTCAGCAGTCTATTCATTTTAAGGCACTTTCTGCCTTGCTCAATCAAATTTAACATGGGAGACTTTTCCTGGCTACATAATCAACATGTAAATTAAAATGCACAGGGATCTCCAAAGAAAAAGAAAGTTAATTATTTAATCGTTTTTTTTTTTTCTATGTATTGGGTTG--GGGGTTTTTAATTAAAAAGA--GTAAATGAATC--------TTTAACATATGTTTAT----TTCTTTTGTATAAAAATGTGACTATAATTAATAGTAA-------AATGACAACATGGAATGTTGAATTTATTGCCCAGTTACAATAATGAGGCTTTATATT---AATCAAAGGTTGTCATTTTAATTGGAAA----------ACCTCATTGATAGTGATAAATAGA--ATTTG-------TAATG------GTTTTTTTCATCCTTAAAGATAAACATCTATACTACTTATTTTTGAGAATATGAAATAACATA-----TGTTTTCATA---AAATATGATAGTTCTAAGTGATATTTCCTTTTATTT------AAAGCAGCCATGCATTTGGCAAGT------------AGTTTACCTTTGTGAAAACTAAAAATATTGCTGAGGAT-----------------TAAAGAGACAAATGAAGAATTCATTTGACATTTTATTAAGAAAGTTTAGGAACAGTCCATTTGGAGTTTAATGTGCCATCCATTGAAGTTTACGATGGAGTGAGCAAAAGGCATGACTATTGATTCTAGGTCTATGCACTTTCTATCTACACAGGATTATTGTAAATGAATAAGTCCATTT chr4 - 94230402 20477262 20477261 20478189 73752214 73752213 73753141 928 CTTGCTGAATGTAAAATAATATTGTAAAAAGACCCAG---TTATATATTTTACTCTGCGCTAAATCAAAAGGTCATAAGTGTTTTTTCTTACTAAACAAACCTCGGTAGTGTAGTTCATCAATATAATTAGATGAAGTATATTCTCTAGTTTCAAATATCAATTCACTTGTAGGCACCTCATGTTTTACTTAATCAAAT------TATGAAATTTTTTTCAGCTACATAGCCAATATCATAACT-AATTGTA-AAGAATCTT---ATAAAAAGAAAGTCAATTATTTTAGTAGGTAATATTTTCATATG-ATTCAACTGCAGTAGTATTTATTCAAAAAGAGGGTGAGTGGAACAGAAATTGCATAACACCATCTTATTGTATTTTTCCCTTCCACAGTATTTCTACCATTAATAGTAATACTGTTAAAAACAACTCAGTAAGTTGGTATTTT----CATTTTGAGAAAGGAGGC-TTATACTTACACTGTGATACCACTATTTTAATAGGAAGAATAAAAGATAATTTAGTGTAAATGATAAACAGATCATTTAGTACTGCTAATGCCTTACATTTTGTGCTTCATTAATTGCATGT-CCTACGTAGCTTACTTTGAAGTATACACATTTATGTCAAGCTTGTTTTTCTAGTCATATGCCCTGGCACACTATAGGGTTGCCATTTGTCTAATCTAAAATCTGAAGAGCATTTACTGTGTTCTTCAGTTTTCAATTTATATTC-----AATTAAAATAGCTACTGTGTATGAAATTAAATCTGGGGGGAAAAAAAAAAACAAAATATTTATAGGGCATTTT-TCAAGGAACTTCAAGAACAGTTCACTTACCGTTTATTTCAAGAACAGTTGAAGGTTA--GTGAAATGCACCATAAATG-AACTATTGATCCAACACCCACATAGTCCCT------ACAGTATAA----ATATGAGCAAATTCATTT ...x:.:..x:.:x..x...:xx......xxx:::..---...x.x:.x..::.:.:.:x.x...-........:x::.x.:....x--..........::...:x:..x.........:..:.:.......::..:.:::.....:.......:xx:..x.....:..xx......:.:x..::..:..:........------.:x..:.:....::::........::...:..xxx..:.-..x..:.-.:.:....:---.x...........:........x.x::xx.xx.x....:x....-...x:::..--.x:..x....x.:.......--..:.:..:.x.--------:x.....:xxx:....----..:..::x.x:x.x.:.:.xx...:x...........-------..x:.....x::.x.x....:xx..x.----..x..xx.:x..x.....-.....:.---.x.xx:.x::::::........x....:----------.x:.:.x..xx.:.......:...--....:-------.....------:....x.x.x..x....xx::.x::-:...:::x:....:...x:..x...::x.x.x.::.x-----......:x..---.x..::xx.:.:x.xxx:.::x:..x..x...:.:.------...x.x.xx:x......:x::x..------------.:....:x..:-----..:.....xx::.:...x.x..-----------------x...:.:.x...::..:x...:..xx.:......-.:...:..x..:.:.......:..:..:xx.....x.x::xx.x.x:......x...--:..:.:..x:.x.x.::::-:.........:.x.x::.:.:::.x.::..------....x..x.----.x....::..:.:..... 37M3D25M1I21M2I110M6D39M1D7M1D9M3D44M1D9M2I20M2I11M8I16M4I37M7I27M4D18M1D7M3I28M10I24M2I5M7I5M6I25M1D37M5I10M3I36M6I24M12I11M5D22M17I34M1D57M2D19M1D30M6D9M4D18M 520/831 62.6% 928/94230402 0.0% 137/831 16.5% 10920038 NA +3207 chr4 + 190214555 31402021 31402020 31402096 76 TATATATAAACACAAATTATATATATACACACTTATATATATACATGTATACATATATGTATATATACATGTTATA chr4 - 94230402 78899133 78899132 78899208 15331195 15331194 15331270 76 TATATGTATAGGCAGAATGTATTTTTATACACTTATGTATATAAATGTATGTTTTTATGTATTTCTCTAAGTCATA .....:..x.x:..:.x.:...x.x..:........:......x......::x.x.......x.x.x:.x..:... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% -47497112 -46733290 +3178 chr4 + 190214555 31405346 31405345 31405406 61 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTATTTTCTTCTAAGTTTCTGTT chr4 - 94230402 72570666 72570665 72570725 21659678 21659677 21659737 60 AAAGAAACAAACAAAAATAAAAAAGAAAGGAAAAAATATTCTTTTCTCCC-ATTTTCTGCT ...:...x...x.....x......:...::..........x......:.:-.x......:. 50M1D10M 48/60 80.0% 60/94230402 0.0% 1/60 1.7% -41165320 -53065082 +3185 chr4 + 190214555 31408667 31408666 31408717 51 AAACATGCACACATATGTACATTGTGTACACACGCACACACACACACACAC chr4 - 94230402 42571778 42571777 42571828 51658575 51658574 51658625 51 AGACATACACACATGTATACATGGTATACACACACACACACACTTGCTCAC .:....:.......:.:.....x..:.......:.........x::.x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -11163111 -83067291 +6307 chr4 + 190214555 31456814 31456813 31457106 293 TCAAATTTATAAATAATGATTTTTTTTTCCAGAACAATTATGTCATGGAAGAAAAGACATCATTATCTAATTAGCAAATTCAGATATATAGTATACATTTCCCACTTGATTTTCTCCAGATAATTCAAAAGTGATAACTCTAATGAAGATAGACAAATTCAGTGTGTTAATTAGCAGATGATAATGAAAGGACATTATTGTTGAGGATGCTATCTATAGAAGATTTCCTATTATGTTCCCCCAGAAA--------------TACTTGCTTTTTCTCTCAGACTTT-----------AAGAAAAATAAGGAGATTATTT chr4 - 94230402 20494036 20494035 20494334 73736069 73736068 73736367 299 TCAGAATAACAAATAATA--TTATGTTTCCAGACCAGTTATTCCA--AATGTGAGAACAATATTACCTAATAACTAAAC--------ATCATATATCTTTGCTACCTGATTTTTGCAAAAGCATTCAGACATGACAACAACAATGCACATAGACAAGTTCAGTAGACAAATTAGCAGCTGATAATGAAAA-----TATTTTTGAGAACTTT-TTTATCTAGAAGCTCATATGCTGGTAGGTGAAAAGAACACTATTTCTACTACTTG-TTTTTCTCAAAGAATTTTTAATTTTGTAATAGAAAATGAGTAAATTGTTT ...:.x.x.:.......:--..x.x........x..:....x:..--:.x.x:.::...x:....:.....x.x:...:--------..x:....:x...x.:..:.......:x.x.:.xx.....:.x:...:...xx:....x.x........:......:x::x.........x...........:-----....x.....:.:x:.-.:...xx.::.x:..x...xx..x.xxx:x.:..:--------------......-........xx...x...-----------.x::.....:..x.:...:... 18M2D25M2D32M8D103M5D16M1D35M14I6M1D17M11I22M 187/274 68.2% 299/94230402 0.0% 44/274 16.1% 10962778 NA +3043 chr4 + 190214555 31483963 31483962 31484004 42 AAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAGAAAAAGAAA chr4 - 94230402 49250049 49250048 49250090 44980313 44980312 44980354 42 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAA .........:............:.x:...:.........:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -17766086 -76464316 +3111 chr4 + 190214555 31496144 31496143 31496196 53 ATCTAAAAAAAAAAAAAAAAAAAAAAAAAGCAAATAAACAAAATATCCTCTTT chr4 - 94230402 562032 562031 562084 93668319 93668318 93668371 53 ATCTATAAGAAAAAAAAGAAAAAAAAAAAGCGAGGCAGTAAAAGCTCCTCTTT .....x..:........:.............:.:xx.::....xx........ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 30934112 NA +3121 chr4 + 190214555 31540633 31540632 31540695 63 CTGTTTGGTATTGTCAGTTTTTTTGGTGTGTGTTTGCTTTTCTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339944 49339943 49340006 44890397 44890396 44890459 63 CTATTTGGTTTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTT ..:......x.x.:xxx.:......:...:.x.:.x...:...:...:.:............. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -17799311 -76431091 +3445 chr4 + 190214555 31544398 31544397 31544469 72 TATATATGTGTTTATCTATATATATATGTTTATATATATATATATAGAGAGAGAGAGAGAGACAGAGAGAGA chr4 - 94230402 33398804 33398803 33398873 60831530 60831529 60831599 70 TATAAATGTATTTAG--AAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ....x....:....x--.x:.:.:::...x.:....:.:.......x.x...................x... 15M2D55M 54/70 77.1% 70/94230402 0.0% 2/70 2.9% -1854406 -92375996 +3364 chr4 + 190214555 31544532 31544531 31544601 70 TCCCATATATATATGTATACACACATACATATATGTATATATATGTATGTGTGTATACATATATATGTAT chr4 - 94230402 66904843 66904842 66904912 27325491 27325490 27325560 70 TTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .::.......:..:...:...........:.:.:::....x..x..x::x.........xx:...:.:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -35360311 -58870091 +3609 chr4 + 190214555 31593146 31593145 31593447 302 CTTCATACTTTACCATTCTTTTAATCTTCTTTCTTTTCTCCTTCCTTCCTTCCTTTTTCTCTTTCTTTTTCTTTCTTTCCTCTCTTTCTCTCTCTTTGTTTCCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCTTTCTTTC-------TTTCTCTCTTTCTTTCTTTCTTCTGGAAAATTCTCACTCTGTCACCTAGGCTGGAGTGCAGTGATGCGATCTTGGCTCACTGCAACCTCCGCC chr4 - 94230402 67172904 67172903 67173201 27057202 27057201 27057499 298 CTTTGCATTTTTCACCTGTTTCCCTTTTTCTTGATTTTTCCATTGTTACTTTCTGTTTCACTGAATCTTCAAATCTTTCCATTTCTGTTCAAACTTATTCTTCTGTAGTGTTTATCTCATCATTTCCTTCCATATAATCCACTTCTCACTTTTCTTACCAGTTCCTGGAAGCTTTCCTTCACTTTCTTCTCTGCTCCTCTCAGCCTTTCACATCAATCACTTTCTCTCCTCTGTATTTCTGTCAATTCCTGTCAGGACCCTGTAGACTTTAGTGCA------CAAC-----CTCTTTGCATCCTCCACC ...:::.:...x.xx:.x...:xx.:..::..xx...:...x.:x..x...:..x....x..xxx.:..:xxx.......x:.::.x:..xxx...xx.:.:..x.xx.x:..x...:x::x....:...:x.x.xx::.x:.::.:x:.......x..xx.:::.xxxxx.....:...x:.:.:....:.x:.:.....xx:.....-------.:x..:...:..:.::x.x:.....xx..x.:..xx.xxx::.x:x...:..xx......------.:.:-----...x:....x.....:.. 209M7I60M6D4M5D18M 163/291 56.0% 298/94230402 0.0% 18/291 6.2% -35579758 -58650644 +3210 chr4 + 190214555 31593162 31593161 31593236 75 TCTTTTAATCTTCTTTCTTTTCTCCTTCCTTCCTTCCTTTTTCTCTTTCTTTTTCTTTCTTTCCTCTCTTTCTCT chr4 - 94230402 27426809 27426808 27426883 66803520 66803519 66803594 75 TTTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT .:..x.:x:..x:.:...::.:x...x.:x:..:..........::........:........:::x....x... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 4166353 NA +4282 chr4 + 190214555 31593186 31593185 31593303 118 CTTCCTTCCTTCCTTTTTC----------TCTTTCTTTTTCTTTCTTTCCTCTCTTTCTCTCTCTTTGTTTCCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTC chr4 - 94230402 43081900 43081899 43082023 51148380 51148379 51148503 124 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTC----TCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTC ..:.........x.x:...----------:.:.:.....:....:...:...----..x.:...:x....:.x....xx.::.xxx:....x.........:...:.....:.x.xx...:....... 19M10I23M4D72M 82/114 71.9% 124/94230402 0.0% 14/114 12.3% -11488714 -82741688 +3151 chr4 + 190214555 31593230 31593229 31593321 92 TTTCTCTCTCTTTGTTTCCTTTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTT---CTTTTTCTTTCCTTTCTTTCTTTTCTTTC chr4 - 94230402 13622132 13622131 13622226 80608177 80608176 80608271 95 TTTCTCCCTTTTTGTTTCCAACTGACCTTTTCTTCTTGTTTAGTTTTGTTTTTCTCTTTCTTTTACCTTTAATTATACTTACCTCTtattttgtc ......:..:.........xx::xx:........::.x...xx..:.x.:.............---....xx:.x.x...x.:.::.x..:.x.. 63M3I29M 63/92 68.5% 95/94230402 0.0% 3/92 3.3% 17971098 NA +3112 chr4 + 190214555 31593255 31593254 31593367 113 TCTTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTTTCT chr4 - 94230402 65908685 65908684 65908797 28321606 28321605 28321718 113 TCTTCTCTTTGGCTTTCTTTCCTATTTCTTCTGTCTCATTCTAGTCTGGATATATTTTTATTTCATCCTTCAATCTTTTCTAACTTCTTCCCTCTTTACCTATCTTCAGTTCT ....:.....xx.........:.x:..::...x...:x:.:.xx::.xxx.x.x...:.x..::x..:...xx........xx...::..:..:.:.x:..x...::xx.... 113M 69/113 61.1% 113/94230402 0.0% 0/113 0.0% -34315430 -59914972 +3103 chr4 + 190214555 31593321 31593320 31593398 78 CTTTCTTTCTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTCTGGAAAATTCTCACTCTGTCA chr4 - 94230402 87765871 87765870 87765948 6464455 6464454 6464532 78 CTTTCAGCATTTACCTTCTATTTCTCTTTTTTGCTTTTTCTCTTTTATTTTTCCTCCCTGAACACTTTTATGCCTTCA .....xx:x...x.:....x.:.......:..x....:.......:x..:..:..:.:x...x.:.:.:.:x.:x... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -56172550 -38057852 +3678 chr4 + 190214555 31620119 31620118 31620211 93 TTTCTTTTCCATTTGGTTATTTTTTTACATTTTTCCCTCCCTTCCTCCTCTCTTTCTCTTTTCCTTCCCTTCCTTCTTTCCTTTTTTCCTTCT chr4 - 94230402 46943450 46943449 46943542 47286861 47286860 47286953 93 TTTATTATTCATACCATTATTTTATTACACTGATCCTTCCCTTCCCTCTCCCAATTTCCTTTTCCCTCTGTCTGATTTCCCTTCTCTCCTTCT ...x..x.:...x:x:.......x.....:.xx...:........::...:.xx.:..:...:.:::.:x..:xx:..:....:.:....... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% -15323331 -78907071 +3014 chr4 + 190214555 31641936 31641935 31641977 42 TTTGCTTTCTCTTTTGTGTGTTTGTGTGTGTGTTTATTTTCT chr4 - 94230402 20867707 20867706 20867748 73362655 73362654 73362696 42 TTGGCTTTTTTTTTTGTGTGTGTGTGTGTGTGTTTATTCTTT ..x.....:.:..........x................:.:. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 10774229 NA +3255 chr4 + 190214555 31676254 31676253 31676323 70 CTTCATTGTTGGTGGTCTCAATCCATGCTAGGAAAAAAAAAAAAAACAAAACAAAACAAAACAACAACAA chr4 - 94230402 9788863 9788862 9788932 84441471 84441470 84441540 70 CTCCATTGAGACTGATCTCATTAAGTGCTACTCAGGAAAAAAAAAAACCAACAAAACAAAACAACAACAA ..:.....xx:x..:.....x.xx:.....xxx.::..........xxx..................... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 21887391 NA +3531 chr4 + 190214555 31676266 31676265 31676335 70 TGGTCTCAATCCATGCTAGGAAAAAAAAAAAAA---ACAAAACAAAACAAAACAACAACAACAACAAAAAAAA chr4 - 94230402 12295651 12295650 12295722 81934681 81934680 81934752 72 TAATTCCAACTTTTTCTGGGGAAAAAAAAAAAATCCACAAAA-AAAACCCAACAACAACAACAACAAAAAAAA .::.::...:::x.x..:..:............---......-.....xx....................... 33M3I6M1D30M 56/69 81.2% 72/94230402 0.0% 4/69 5.8% 19380615 NA +3062 chr4 + 190214555 31676282 31676281 31676336 55 TAGGAAAAAAAAAAAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAA chr4 - 94230402 32680541 32680540 32680595 61549808 61549807 61549862 55 TAGAGACTAACAAAAAGCCAAAAAAAAACCCAACAACAACAACAACAAAACAAAA ...::.xx..x.....:x.....x.....xx...................x.... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -1004259 -93226143 +3005 chr4 + 190214555 31676295 31676294 31676337 43 AAAAACAAAACAAAACAAAACAACAACAACAACAAAAAAAAAA chr4 - 94230402 70931659 70931658 70931701 23298702 23298701 23298744 43 AAAAAGAGAACAAAACAAAACAACAACAACAAAAACTAAAAAA .....x.:........................x..xx...... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -39255364 -54975038 +26477 chr4 + 190214555 31677887 31677886 31678719 833 CAATTCATTTTTCATCAGTATACTTGTCAAAAGTATATGAAATATAAAAAAAATTACATGAATTTCCCATGAATGTTTTTAGTCATGAAATAGTATTATATATT-TTAAGTATACTGTTTTCTAACAAACTTCTTTCAAACTATGCACATAATTGGAGATGAAGATCT----AATAGTCTATATTATAGCATGATGTGCTGAGTATAACCCTGTAAACA-AATGGGCTTCTTCAATTGCATCATACACATATACATGGAGGAAAAATTCTGAACTTTAGCCAGGTGTTCTACAATACGACAGACAGTCTTTATTTAAAAATCTAAATTAATTTAATTTTTTATACTTTTATTTTAGGTTCAGGGTTTACATGTGCAGGTTTGTTACATGAGTAAATTGAATGTAAAACTGCCAAAATTTTAAATAGTTAGATTTCTTAATTACATCTTGATGGAAGACAAAAGAATTTTGTAAACAATTAGTCCCCTGTTATGTTGTGTATCAGATAACATGTTACATTTCTCTTGTTCTGCTGACTTGAACTTATCAAGACTTGAGTGTACCTTTTTTATTTTTTTTCCTGAAGCTCTGCTACACAACAGATGGGATGTCTAACATCCTTTTCTATTTAAAACATGCAAGTTCTAATCAACAGGAGGGTTTTAGAATGTTAAACCAGCCAGCCATAAGAAATGTGTCATGCAGTTTCCTGTCATTCTAATTAATTAGATAGCATTATTTGTTGTCCCCAATGAACCTAAATGAGCTCAATGCCAGGATAATAGCTTCATTCTTATCAAAGGTTTG-TTTTCATATTATCTGCTTGGATTGAAGCAAAAA chr4 - 94230402 20537157 20537156 20537899 73692504 73692503 73693246 743 CAATATATAGCCCCTTCATACATTTTCAAAATCTATTTGAAATATACTAGAA------TGACTTTCACATAAGTGTTGTCAGGCATGAAATAGAATCATGCATTATTAAGAACACTGCTTTCTATCAAATTTGTTTCAGAATATGTACATAATTGGAATCACATCTCTGCATAACAGCAAGCATTATATCATTATTTGCCAAATAGCACTTTGTAAACAGAACGTGCCACCTCAGG------ATACACATTCGTCTT----AAAAATTTC--ACTT-----------------------------GTACTCACTCAAAGAGGTA-------TTAGACAGAGACATTTTTATT----------GACTAGCATGA-------TGTCA---GACTGAACGAAGAATCAAACTG-----ATACTAAG-ACTTACTTTTCTCCAT-ATAGTTTGATTTAAAA-AATAGAGTTATAGAAACAACTGGAAGTGTGTCAT--TGTATATCAGATAG---GATACATTTGTCTTATTCTTCTAATGTGAACTTATCAAGAGTTCAGTGTAT--------TTTTTTTTCCTGAAGATCTGTTACACAGCAGATGGGATGTCTAACATCCTTTTCTATTTAAAACATGCAAGTTCTAATCAACAAGAGGGTTT-AGAATGTTAAACCAGCCAGCCATAAGAAATGTGTCACACAGTTTGCTGTCATTCTAATTAATTAGATCGCATTATTTGTTGTCCCAAATGAATTCAGATGAGCTCAATGAC-TGATAATAGCCTCATTTTTTTCAGGGATTTTCTTTTAATTTTATTCACTTTGATTTAGGAGAGAA ....x:..xx::.x.:x:..:.:..x:x...xx...x.........xx.:..------...x....x...:.:....x.:..x..........x..:..::...-.....x.:....:......x....:..x.....:.x....:...........:x::x.xx...----..:..:xx::......x...x..x...::.:..xx..::........-..:.x..:x.:...:x------........x:::x.x----.......::--....-----------------------------..x:.:.:.:...:.xx..-------...:x:xxxx.:.:.......----------.::.x:....x-------...:.---..x.:..:x:.:x:.x......-----..x:...:-.x...xx.....:x..-.:.x:.....xx..:.-..x...:..x.:x......:.:.xxx:x...:..--...:.........:---.x.......x....:....x..:.:x..............x..x......:--------...............x....:......:.......................................................:........-....................................::......x......................x.................x......:::.:............x.-x.........:.....:..x...::.:...x-....x..x....:::...x....x.:.x:.:.. 52M6D46M1I63M4I47M1I16M6D15M4D9M2D4M29D19M7D21M10D11M7D5M3D22M5D8M1D16M1D16M1D34M2D14M3D51M8D92M1D111M1D31M1I33M 553/736 75.1% 743/94230402 0.0% 104/736 14.1% 11140730 NA +3570 chr4 + 190214555 31711471 31711470 31711541 71 GTACCACAAAATGTGCTTTATTCATTATTTTGATAAGTGTAGTTTAATTATAATCATCTATGGTAATGTTT chr4 - 94230402 93248661 93248660 93248731 981672 981671 981742 71 GCATCACCAAACGTCCTTTGTTCATTTATTTGACAAGTGTAGTGAAGTTTTAATTATTGATGGTTATATTT .:.:...x...:..x....:......xx.....:.........xx.:..x....:..:x.....x..:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% -61537190 -32693212 +3001 chr4 + 190214555 31723735 31723734 31723789 55 AAATATATATATTTATGTGTGTTTGTTTATACATATACAATATATACATATATAT chr4 - 94230402 40623884 40623883 40623938 53606465 53606464 53606519 55 AAATATAAATATTCAGATGTGTTTGTTTAGGCACATGCTACATGCACATACACAT .......x.....:.x:............x:..:..:.x.:..::.....:.:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -8900149 -85330253 +4093 chr4 + 190214555 31743863 31743862 31743945 83 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGTCTCAGCCTCCCCAGTAGCTGAGACTACAGACGTGCACCACCGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx:x..:.::..........x...x..x.x........::.x........::.....--...........:... 66M2D15M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 13546737 NA +3123 chr4 + 190214555 31744708 31744707 31744784 77 ACAAGGAAGAAGGGAGGGAAAGACACACACACACACAGAGACAGAGAGAGAGAGAGAGAGAGAGAAAGGGAGAGAGA chr4 - 94230402 67652061 67652060 67652137 26578266 26578265 26578342 77 ACCAAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..x.:...:.:x:.......xxx.....::...x...x.x.:.xx:.:.:.:.:.:.........:..:......:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -35907353 -58323049 +4298 chr4 + 190214555 31749338 31749337 31749490 153 CCCTCTCTCCACTTTCTTCTTTCTCTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT-TCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTT chr4 - 94230402 45185597 45185596 45185750 49044653 49044652 49044806 154 CCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ......::.:.x.:..xx:.....x:...x........:..:..::x....::x:.......::..::..xx:.::.::......:x...xx.x::.:..x:.x:..x.:.....-x..::..:.xx.::...x:.:..:.:....:xx..... 115M1I38M 92/153 60.1% 154/94230402 0.0% 1/153 0.7% -13436259 -80794143 +4461 chr4 + 190214555 31749355 31749354 31749528 174 TCTTTCTCTTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT------------TTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCCCTCCTTCATTTTCTTTCATT chr4 - 94230402 59424944 59424943 59425124 34805279 34805278 34805459 181 TTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCC-----ACTCCCAGCCCTTCTCCTTCATT .:..:....x:...::.::...x......:........xx:x...:xx..::::.x.x:...x:...:.:....x.------------:.:..::....x.x....x..x.:...x.::.x..::.:x.x...:...:.:.:...:.:x...:.....-----x.:.:.xx:.x..:..:...... 76M12I70M5D23M 105/169 62.1% 181/94230402 0.0% 17/169 10.1% -27675589 -66554813 +3242 chr4 + 190214555 31749363 31749362 31749446 84 TTTCTTTCTTTCTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 41570553 41570552 41570636 52659767 52659766 52659850 84 TTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCT ...x...x..x::...:.x.......:...............xx..:x:x.xx:::x...:::....:.xxx............ 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -9821190 -84409212 +3666 chr4 + 190214555 31749389 31749388 31749540 152 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTC------CCCTTCTTTCCCTCCTTCATTTTCTTTCATTCCTTCTTTCTTT chr4 - 94230402 69667737 69667736 69667893 24562510 24562509 24562666 157 CTTTAGTTTTTTCTTTTGATCTGT-TTTGTTTCTGTTTTGGCTTTTCAGTCTCATATCATAATTCATGTTCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTCCACCCACCCATACCATTTCCATCTCTTTCCTTTGCTTACTGCTTT ....xx..:.......:xx...x.-...x.....x.:..xx:..:.:xx.:..x.x::x.xx:.:x:..:..:.:..:.x.......:.....xx.....:........------...x:.:x.x..x::.:...:.::..:.x..x...x:.x.... 24M1D84M6I43M 95/151 62.9% 157/94230402 0.0% 7/151 4.6% -37918348 -56312054 +3044 chr4 + 190214555 31749430 31749429 31749492 63 TTTCTTTCTTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCT chr4 - 94230402 20830355 20830354 20830417 73399986 73399985 73400048 63 TTTCTTTTCCCACCTCTTTTTCTTACCTCCTTCCTACATTTCTTTTCCTACTTTTTCCTACCT .......::::x::..........x.x........x.x..:......:.x...:..:..x:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 10919075 NA +3089 chr4 + 190214555 31749438 31749437 31749513 76 TTTCTTTCTTTTTCTTCCGTCCTTCCTTCCTTCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCC-CTCCT chr4 - 94230402 200613 200612 200689 94029714 94029713 94029790 77 TCCCTCTTTCATTACACGGTTTGTTTTTCCTTTTTTTCCCTTCTTCTTTATTTCCCCCCCCCCCTCTTTTCACTCCT .::..:.:.:x..x:x.x..::x.::......::...:.:.........x....:.:.:....:.....:.-..... 71M1I5M 51/76 67.1% 77/94230402 0.0% 1/76 1.3% 31548825 NA +4204 chr4 + 190214555 31749469 31749468 31749711 243 TCCTTTTCTTTCTTCTTTCTTTCTCTCTCCCCTTCTTTCCCTCCTTCATTTTCTTTCATTCCTTCTTTCTTTCCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTT-----TCTTTCTTTCTTTCTCTCTC---TCTTTCTCTCTTCTTTTTTTCTCTGGGTCTCACTCTTTCACCTA-GGCTGGAGTGCAGTAGTGCAATCATTGTTC chr4 - 94230402 28459063 28459062 28459313 65771090 65771089 65771340 251 TCATTTTTTTTTTACTGACTTTAT-TATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTCAGCCATAATTTGGGTTCAGCAAGAGAACAAATGCTC ..x....:...:.x..xx....x.-.x.:x.:....x.x.::.:.x.x.x....:..x:.:.:..:.xx:x..:..:..:x:.::xx.::.......:.::xx.:...x.x::.....:.....:x........:....:.:xx.::.:-----.x......x..xx.:..x:.---.x.....x....:x...x::..x.xxx...xx..:.....x.:.-:::.x.:..x...:.:x:x..:x.x..:.. 24M1D124M5I20M3I44M1I30M 143/242 59.1% 251/94230402 0.0% 10/242 4.1% 3290406 NA +3125 chr4 + 190214555 31749499 31749498 31749567 69 CCTTCTTTCCCTCCTTCATTTTCTTTCATTCCTTCTTTCTTTCCGTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597714 45597713 45597782 48632621 48632620 48632689 69 CTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .::.:....x:..:.:..:..:...:......:.....:::::::......:..::.x......x.x.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% -13848215 -80382187 +3036 chr4 + 190214555 31753883 31753882 31754029 147 ACCTAAACTAGGAAAACA------------AATTGCAGTCAGCTTTTTTATTCTTCTTTATAATATGAAGAGGTTTTATATATATATATATATATATATATATATATATATATACACACACACATATATATATACACACACATATATATATACACACAT chr4 - 94230402 7596335 7596334 7596480 86633923 86633922 86634068 146 ACATGAACTGAGGAAATATCATAACAGAGGAACAGCAGAAAGTTTTCAGATTTTTCTCTA--------AGACCATCTTCATCT-----TCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..x.:....::.:...:.------------..:x....xx..:...:xx...:....:..--------...xxx.:.x:..x.-----.x:...:.x..::...:.x..:....:......:...:....:.x...:.:..x..:::.:::..:.x... 18M12I30M8D15M5D71M 86/134 64.2% 146/94230402 0.0% 25/134 18.7% 24157548 NA +3911 chr4 + 190214555 31753965 31753964 31754078 114 TATATATATATATATATATACACACACACATATATATATACACACACATATATATATACACACATATATATACACACATATATATATATACACACACACACATATATATATAAA chr4 - 94230402 73121102 73121101 73121215 21109188 21109187 21109301 114 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAA .:.::..::....x:...:...:.:.....x.x::..:x::...:..:....x:..:..:x::....:.:x::...:...x...:::x:...x.x........:....x::... 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% -41367137 -52863265 +3033 chr4 + 190214555 31753968 31753967 31754014 47 ATATATATATATATATACACACACACATATATATATACACACACATA chr4 - 94230402 45922266 45922265 45922312 48308091 48308090 48308137 47 ATTTAAGTATATATATACACACACACATGTATTTAAAGACACACATA ..x..x:.....................:...x..x.x......... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -14168298 -80062104 +3044 chr4 + 190214555 31753980 31753979 31754041 62 ATATACACACACACATATATATATACACACACATATATATATACACACATATATATACACAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ...:.x.::..:...x..:...........:...:....:.x...:.:.:x..:::..:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 24157567 NA +3217 chr4 + 190214555 31753989 31753988 31754072 84 CACACATATATATATACACACACATATATATATACACACATATATATACACACATATATATATATACACACACACACATATATA chr4 - 94230402 89016087 89016086 89016170 5214233 5214232 5214316 84 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACA .......x.::..::........:.x.::::.:.....:::.x..::.:....:..x..:.:.:.:..x....x::.::.:.:. 84M 51/84 60.7% 84/94230402 0.0% 0/84 0.0% -57262098 -36968304 +3192 chr4 + 190214555 31753996 31753995 31754062 67 ATATATATACACACACATATATATATACACACATATATATACACACATATATATATATACACACACA chr4 - 94230402 7596413 7596412 7596479 86633924 86633923 86633990 67 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ...:.x..:..:...x..:......:....:...:....:.x...:...:x..:::.::...:.x.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 24157583 NA +3506 chr4 + 190214555 31753999 31753998 31754110 112 TATATACACACACATATATATATACACACATATATATACACACATATATATATATACACACACACACATATATATATAAACACACATATATATGTAGTTGAAAAAACAATAA chr4 - 94230402 37363040 37363039 37363137 56867266 56867265 56867363 98 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-----ATATGTATAAA---------ATATTAAGCTGGAATAACCAGAA .:.:....:..x::......:..:....x......xx::::.:..:.:...:...x........-----....:......---------....xx..:..:..x...x.x.. 64M5D11M9D23M 70/98 71.4% 98/94230402 0.0% 14/98 14.3% -5609041 -88621361 +3118 chr4 + 190214555 31754023 31754022 31754064 42 CACACATATATATACACACATATATATATATACACACACACA chr4 - 94230402 45271687 45271686 45271728 48958675 48958674 48958716 42 CATATCTATATATACACACATATATATGTATACAAACACACA ..:.:x.....................:......x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -13517664 -80712738 +3127 chr4 + 190214555 31763336 31763335 31763377 42 CCTGTCTCAAAAACAAACAAACAAACAACAAAAAAACCACAA chr4 - 94230402 71528705 71528704 71528746 22701657 22701656 22701698 42 CTTACCTAAAAAACAAACAAACAAACAAAAAAAAAACCACAA .:.::..x....................x............. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -39765369 -54465033 +3248 chr4 + 190214555 31768665 31768664 31768707 43 AAACAAGCAACAGTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56161717 56161716 56161759 38068644 38068643 38068686 43 AAGCAATCAACAGTCTCTCTCTCTTTTTTTTTTTTTTTGTATT ..:...x...............................x.x.. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -24393052 -69837350 +3148 chr4 + 190214555 31778110 31778109 31778149 40 TGTGTGTGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 12795795 NA +3111 chr4 + 190214555 31778112 31778111 31778147 36 TGTGTGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -49850952 -44379450 +3339 chr4 + 190214555 31778112 31778111 31778153 42 TGTGTGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAGAGATGA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..................x.................::.x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 12795797 NA +3194 chr4 + 190214555 31778114 31778113 31778149 36 TGTGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....:................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -49850950 -44379452 +3316 chr4 + 190214555 31778114 31778113 31778149 36 TGTGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ................:................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 12795799 NA +3170 chr4 + 190214555 31778116 31778115 31778154 39 TGTGTGTGTGTGTGCGAGAGAGAGAGAGAGAGAGATGAA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..............:.x..................x... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 12795801 NA +3110 chr4 + 190214555 31782461 31782460 31782511 51 CTATTATTCTCATGTGTATACACACACACACACACACACACACATTTTGAA chr4 - 94230402 66904836 66904835 66904886 27325517 27325516 27325567 51 CTGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAA ..::.:..:....:.:.:...::.........:............x..x.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -35122375 -59108027 +3142 chr4 + 190214555 31798661 31798660 31798741 81 GACTTCCTCCTGCCACTTTGTTTTTTCTTTTCTGATTGTTTTGTGGTCAACTCTTACTTCTTTCCCTCCTTCTGGTCTTTT chr4 - 94230402 54566211 54566210 54566291 39664112 39664111 39664192 81 GACTTTCTTCTGTAGCCCTGTGGTTTCTTTTTTGACTGTTCTGTGCCCATTTGTTCTCTTTCTCTATGCTTGTGTTCTCTT .....:..:...:x:.::...xx........:...:....:....x:..x:.x..x::.:.:..:x.x...x..x...:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -22767550 -71462852 +4654 chr4 + 190214555 31815017 31815016 31815157 141 ATATATATTA--TATATATGGGGTGC--ATATATAATATA------AATATTATATAGGTTATACGTAATATAT-----ATTATATATAGGTTACATATATAAAATATAATATACAATATATTATATATTATATATAAACTATATATGTGATATAT chr4 - 94230402 51771622 51771621 51771773 42458630 42458629 42458781 152 ATATATAGTAATTATATATGGTATTCTTATATATAATATAGTATTTAGTATTATGTAG--TATATTTGATATAATTGTAATTATATATAGAATGCTTGTATATAGTGCAGTATACAGTATTTTATATATCAGATAT--TTGATATACTTGACATGT .......x..--.........x:.x.--............------.:......:...--....:x.:.....x-----...........:x.:.x.:....x.:.::.:......:...x........:.x....--x:x.....:x...:..:. 10M2I14M2I12M6I12M2D14M5I57M2D18M 106/137 77.4% 152/94230402 0.0% 19/137 13.9% -19956605 -74273797 +3189 chr4 + 190214555 31815844 31815843 31815898 55 TATACAAACACAAATGTGCATATATGTATATACATGTATGTGTATGTGTATATAT chr4 - 94230402 71630147 71630146 71630201 22600202 22600201 22600256 55 TATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGT ......x........:.:.....x.x.:...:.....:.x..:.....x....:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -39814303 -54416099 +3372 chr4 + 190214555 31817117 31817116 31817208 92 TAATTATATATGACATATATATAATTATATATGATATATTATATATGTCATATATAATTATATA------TATTATATATACATATATATAATTATAT chr4 - 94230402 40247382 40247381 40247479 53982924 53982923 53983021 98 TATCTGTATTTGTTTTATATATTGTACTATATGATATAGTTTATATGTAATATGTATTTACATATTATACTTTTATACATTCCTATATTTATTTTTAT ..x:.:...x..x:x.......x:.xx...........x.x.......x....:..x...:...------.x.....:..x.x.....x..x..x... 64M6I28M 68/92 73.9% 98/94230402 0.0% 6/92 6.5% -8430265 -85800137 +3926 chr4 + 190214555 31817213 31817212 31817313 101 CATATATAATATATTATATATGACATATGTAACATATTATATATAACATATATAATATATTATATATGATATCTAATATATTATATATGATATATCTAATA chr4 - 94230402 22326844 22326843 22326944 71903459 71903458 71903559 101 CATATATAATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGATTAAAATACCTAACATTTCATATATAATACATTCGATA ..........::..........xx.:....xxx..x.......x.x....xxxx....:x.:xx..x:...:....:..x.:......:...:..:::... 101M 70/101 69.3% 101/94230402 0.0% 0/101 0.0% 9490369 NA +4297 chr4 + 190214555 31817696 31817695 31817840 145 TTATATTATATATACATATACATAATATATAATATATAATGTATATTATATATTATGTATAATATATAATATATATATTATGTATAATGTATAATATATATTATGTATAATGTATAATATATATATTATGTATAATGTATAATAT chr4 - 94230402 48211464 48211463 48211596 46018807 46018806 46018939 133 TTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATAT--TATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGAATCAT------TGGATGATATGCAGTAT ....xx...x........::xx........xx...:..x..........x.x....:...--.....:x:....x...:..:...----:.:.::.....::..:..::..x...:.xx:..------..x..:..:.::.:... 60M2D23M4D33M6D17M 93/133 69.9% 133/94230402 0.0% 12/133 9.0% -16393768 -77836634 +4043 chr4 + 190214555 31817707 31817706 31817888 182 ATACATATACATAATATATAATATATAATGTATATTATA----TATTATGT---ATAATATATAATA-TATATATTATG-------TATAATGTATAATATATATTATGTATAATGTATAATATATATATTATGTATAATGTATAATATATATATTATGTATATTATATAATATATGTTATGTATATTATATAATAT chr4 - 94230402 20596445 20596444 20596639 73633764 73633763 73633958 195 ATATTTCTAAGTCAAATGTTAATTACCATGTATATCATAACATTATAACGTGaaataatatttaataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGT--TGTCTTATATCTCTACAATGTGATAT ...:x.x..x:.x.x..:.x.xx..:x........:...----...x.:..---.......x.....-.x.:......:-------..:xx.:..x..:......x..:....x..........:..x..xx.:.....x...:...x..x.x:..xx:...x.x..:.--.:.x.xx...x.x..:x..:.:.... 39M4I8M3I13M1I11M7I83M2D26M 124/180 68.9% 195/94230402 0.0% 17/180 9.4% 11221262 NA +5056 chr4 + 190214555 31817779 31817778 31818076 298 ATAATGTATAATATATATTATGTATAATGTATAATATATATATTATG-TATAATGTATAATATATATATTATGTATATTATATAATATATGTTATGTATATTATATAATATATATTATGTATATTATATAATATATATTATATATAATATATATTATATATTATGTATAATATATAATATATATTATGTACAATATATAATATATATTATGTACAATATATAATATATGTTATGTATAATATATA-------ATATATGTTATGTATA-ATATATAATATATGTTATATATTATATCATGTATAATA chr4 - 94230402 30253271 30253270 30253541 63976862 63976861 63977132 271 ATAATGCAGAATCCAAAGTCTAGATGACTTTACAGAAGTGCattataatataatgtctaaaatatatataatttaaa----------------ataaatatcaaataatttatGTTA-----GTCATATAAAAC--------TGTAGTATATAGTCTATAGT---TAAAATTTACA-TGTATATT--GTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGTTTATACATCT-GCATTTGCTATAAAGGATAAAGTATGTAATA ......:.x...x:.x.x.x.:x..:.:x.xxx.x.x:.::.....:-........x...x........x..x..x.----------------..:x....:.x.....x...:...-----:.:......x.:--------.:..:......x.x....x.---..x...x..:.-.:......--...x.....:..:..........:x.:.x:...:........:xxx.:...x..:...-------x.x...x......x..-.:..x.-::..x..:....x.xx...xx:.:.:..... 47M1I29M16D24M5D12M8D20M3D11M1D8M2D58M7I16M1I6M1D31M 183/262 69.8% 271/94230402 0.0% 45/262 17.2% 1564508 NA +3664 chr4 + 190214555 31817880 31817879 31818009 130 ATATAATATATATTATGTATATTATATAATATATATTATATATAATATATATTATATATTATGTATAATATATAATATATATTATGTA-----CAATATATAATATATATTATGTACAAT--ATATAATATATGTTA chr4 - 94230402 48211488 48211487 48211620 46018783 46018782 46018915 133 ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA .....x.x...:.xx..........x.xx............::x....x...:......----:.:.::.....x:.....:x..x..-----..x.:x..:....::.x...xx.x:..--.:....x..:.x... 59M4D25M5I27M2I15M 89/126 70.6% 133/94230402 0.0% 11/126 8.7% -16393608 -77836794 +3808 chr4 + 190214555 31817973 31817972 31818136 164 TATAATATATATTATGTACAATATATAATATATGTTATGTATAATATATAATATATGTTATGTATAATATATAATATATGTTATATATTATATCATGTATAATACATGTTATGTATATCATGTATAATACATGTTATGTA-TATCATGTATAATACATGTTATGT chr4 - 94230402 48211465 48211464 48211616 46018787 46018786 46018938 152 TATCATATCTAT-ACATACGAC---TAATATATTCTATGTACTGTATAT--TATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCAT------TGGATGATATGCAGTATCAAGGATTA-ACATAAAATGT ...x....x...-.::...:.:---........x:......:x:.....--...x.x....:...x....::x....x.:.:......:.:.x...:..:x...:.:.x.x.:.:x.....------.:x...x....:.-.....x.x..x.-....:xx.... 12M1D9M3D24M2D70M6D13M1I12M1D11M 107/151 70.9% 152/94230402 0.0% 14/151 9.3% -16393492 -77836910 +3121 chr4 + 190214555 31818421 31818420 31818507 87 TTTATAATATATATTATGTATAATATATATTAT-----GTATAATATATATTATGTATAATATATATTATGTATAATATATATTATATACAT chr4 - 94230402 67910057 67910056 67910143 26320260 26320259 26320346 87 TCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATAT-----ATTGTATATAGTATATATAATATGTAGTATATACAT .:...x.:.....:x..::xx..x.....:...-----::......x....-----..x:......x...:........:..x......... 33M5I13M5D36M 62/82 75.6% 87/94230402 0.0% 10/82 12.2% -36091636 -58138766 +5420 chr4 + 190214555 31819017 31819016 31819245 229 ATAGTATGTATAATATATATATTATTTATATAATATGTATAAGATA---TATATTATTTATATAATATGTATAAGATATATAGTATATATTATATGTATATAAGATATATATAATATACTATATATGTTATATATATTATATATAACATATATAATATATATAATATACTATATATGT---TATATATATTATATATA-ACATATATAATATATATAATATATATTATATATATTA chr4 - 94230402 30253318 30253317 30253541 63976862 63976861 63977085 224 atataatgtctaaaatatatataatttaaa--ataaatatcaaataatttatGTTAGTCATATAAAAC----------TGTAGTATATAGTCTATAGTTAAAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGTTTATACATCTGCATTTGCTATAAAGGATAAAGTATGTAATA ...xx....x...x........x.....x.--...x:...x.:...---...:...x.:......x.:----------.:.........x.x...:xx..x..xx..:..:..xxx.::x.x......x:...........x...x....:.xx....::..:::...:..:......---.x.x...x....:.x..-....x.::.x.xxx.....x:x...xx:...:..x.. 30M2D14M3I19M10D100M3I17M1I37M 150/217 69.1% 224/94230402 0.0% 19/217 8.8% 1565699 NA +5241 chr4 + 190214555 31819099 31819098 31819288 190 TATATTATATGTATATAAGATATATATAATATACTATATATGTTATATATATTATATATAACATATATAATATATATAATATACTATATATGTTATATATAT-TATATATAACATATATAATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATA-------TTATATTATATATA chr4 - 94230402 30253314 30253313 30253503 63976900 63976899 63977089 190 tataatata-atgtctaaaatatatataatttaaaataaatatcaaataatttatGTTAGTCATATAAAAC-TGTAGTATATAGTCTATAGTTAAAATTTACATGTATAT------TGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGTTTA ....x....-:.:.x...:...........x..xx...x..:.:.x...xx....:.xx:x......x..:-.:..xx.....x.x....xx.x.x..x..:-.:.....------.:...x....:..:...........x...::...:.......::.xx::......:....:-------....x....:.x.. 9M1D61M1D30M1I7M6D61M7I14M 130/182 71.4% 190/94230402 0.0% 16/182 8.8% 1565785 NA +4119 chr4 + 190214555 31819107 31819106 31819283 177 ATGTATATAAGATATATATAATATACTATATATGTTATATATATTATA-TATAACATATATAATATATATAATATACTATAT-ATGTTATATATATTATATATAACATATATAATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATATTATATTAT chr4 - 94230402 20596445 20596444 20596616 73633787 73633786 73633958 172 ATATTTCTAAGTCAAATGTTAATTACCATGTATATCATA-ACATTATAACGTGaaata------atatttaataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGTTGT ..:.x.x....x:.x..:.x.xx...:..:...:.:...-.:......-::.:.x...------....x.....xx:.:...-..:xx.:.x...:.x....x..................x:....xxx.:..x..:........x:..:.xxx..x.x:..xx....x.x..:..:. 39M1D8M1I9M6D18M1I96M 115/170 67.6% 172/94230402 0.0% 9/170 5.3% 11222662 NA +4179 chr4 + 190214555 31819155 31819154 31819291 137 TATAACATATATAATATATATAATATACTATATATGTTATATATATTATATATAACATATATAATATATATAATATATATTATATATATTATATAATATATATAATATATATTATATAT----ATTATATTATATATAAAA chr4 - 94230402 67910059 67910058 67910193 26320210 26320209 26320344 135 TATTACATATACAATACTAAAAATATACTATTAG----ATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACA-TGTGAGATAAATTTAAGCTG-ATTAAATATCAACATTTGAATACATATAAGA ...x.......:....:xx.x..........xx:----...:...x..x.....x::......:............:..x......:.-.:.:x:...x..x...xx.:-....x....----...xx.x..:......:. 34M4D50M1D20M1D9M4I18M 97/131 74.0% 135/94230402 0.0% 10/131 7.6% -36090904 -58139498 +3643 chr4 + 190214555 31832572 31832571 31832713 142 ATATATAATATATATTATATATATTATATAATATATATAATATATATTATATATA-------ATATATTATATATATA-ATATATATTATATATATTATATATAATATATAATATATATAGTATATTATATATAA----TATATAATATATATA chr4 - 94230402 30253428 30253427 30253580 63976823 63976822 63976975 153 ATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGTTTATACATCTGCATTTGCTATAAAGGATAAAGTATGTAATA-GTATCATCATTTAAAAATAGAAGTCATTTAATATTTATA ....:..:...........x...::...:.......::.xx::......:....:-------x...x....:.x....-..x.::...xxx....xx:x...x.:...:.....-:...x:.xxx...x.x...:----:..x......x.... 55M7I16M1I35M1D20M4I15M 98/141 69.5% 153/94230402 0.0% 13/141 9.2% 1579144 NA +3725 chr4 + 190214555 31832594 31832593 31832770 177 ATTATATAATATATATAATAT-----ATATTATATATAATATATTATATATATAATATATATTATATATATTATATATAATATATAATATATATAGTATATTATATATAATATATAATATATATAGTATATTATATAT---------ATTATATATAAAGATATATTATATATATTATATAATATATTATA chr4 - 94230402 67910055 67910054 67910224 26320179 26320178 26320348 170 ACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATA-----------------TACATGTGAGATA-AATTTA---AGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACA .:.x...x.:.....:....:-----....xx...xx:...:..x...x.....x.:.....x:.......x....:..:....-----------------..:..:.:.x...-...x..---..:xx....x....---------.x..:......::.x.....x...xx..x.:.:.x..:....:. 21M5I58M17D13M1D6M3D14M9I44M 112/156 71.8% 170/94230402 0.0% 35/156 22.4% -36077461 -58152941 +3012 chr4 + 190214555 31834912 31834911 31834987 76 TATATATATATATATATATATATATATATATATATATTTTATTATACTTTATATATATATATATTTTATTATACTT chr4 - 94230402 12785632 12785631 12785707 81444696 81444695 81444771 76 TGTATAGATTTGGTTATATATACTTACACACATACATGCTTATATTCTTTATATATGAATACATTTAATCACATTT .:....x..x.:xx........:x..:.:.:...:..x:.xx...x..........:x...:....x..:.:.:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 19049280 NA +3412 chr4 + 190214555 31868388 31868387 31868488 101 CTCCTCCCTTCTTTCCCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCTTTCTCTTTCTTTCTTTCTT---------TCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCC chr4 - 94230402 90970066 90970065 90970175 3260228 3260227 3260337 110 CTCTTCTCTGCTTTCCCCTTCCTTCTTTCATTCCTTTCACATCTCATTTATCCTTCCAAACCCCTCAGGTCTGAATGCTTTTGCTCttttttttttttttttttttCCCC ...:..:..x...............:...x....:.:.x:x:...x...x..:...:xxx:::..:---------.x...::.:::x.:...:...:...:...:.::.. 66M9I35M 65/101 64.4% 110/94230402 0.0% 9/101 8.9% -59101678 -35128724 +3113 chr4 + 190214555 31868391 31868390 31868451 61 CTCCCTTCTTTCCCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCTTTCTCTTTCTTTCTTTC chr4 - 94230402 68014329 68014328 68014386 26216017 26216016 26216074 58 CTGCCTTCT--CCCCTCCCCACCTTCTTTTTC-CCCTCCCCGCTTTCTTTTTCTTTCTTTC ..x......--.....:..:x.....:..::.-.......:x......:............ 9M2D21M1D28M 48/58 82.8% 58/94230402 0.0% 3/58 5.2% -36145938 -58084464 +3742 chr4 + 190214555 31868519 31868518 31868686 168 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTTCTTTCTTTCCTTCCTTCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTCTTTCTCTTT chr4 - 94230402 45185583 45185582 45185750 49044653 49044652 49044820 168 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x.....::.........x..::.:x.:.:::.....:...:x::::x..::.:.:..x:.:xx.x:....:x..x::.x.......xx.:x:.::.xx.:::..x..::.:...::..xx..... 168M 92/168 54.8% 168/94230402 0.0% 0/168 0.0% -13317064 -80913338 +3385 chr4 + 190214555 31868578 31868577 31868759 182 CTTTCCTTCCTTCCTTTCTTCCTTCCGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTCTTTCTCTTTCTCTCTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTC--CTTTTCTTTCTTTCTTTTTTTCTTTTTCTTT chr4 - 94230402 59424941 59424940 59425124 34805279 34805278 34805462 184 CTGTTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTCATT ..x.::.:.::.x.:.......:..xx.:.x.....::..:xx:x:...xx.:.::.:x.x...:x:.:::..:..:x.:..x..::.x.x::.:....:.:x:x....x..x:..x.x.::.x..:..:x.x.::..::....:.:.:..--....:.::x..::.xx:::....::...x.. 151M2I31M 97/182 53.3% 184/94230402 0.0% 2/182 1.1% -27556363 -66674039 +3245 chr4 + 190214555 31880919 31880918 31881119 201 TAAAGTCTCAAACTTTCCCACCTTTTTCCTTTCTTTCTCTTTCTTTCTTTCTCTTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCCTCCTCCTTCCCTCCCTCCTTCCTTTCTTC------CCTTCCTTCCTTCCTCCCTTCCTTCCTTCTTTACATTTTTTGTTTCTTTCTGTCTTTCATT chr4 - 94230402 73089711 73089710 73089908 21140495 21140494 21140692 198 TAAAATTTTAAACCCATCAGCACCGTTCCTTGCAGTCTTTCCCCTTCTTCATTATTTATCATCTCTGTCCTTCAATCACTTCTTAATCCTTTCCTTTCTCCCTTACTTC---------TCATTCACTTCAGACATTCACAGAGAAGCTATTCAACCTCTCTCTCATCCCCTCTTGTACAGACATTTTGTCACTTGGTATGTTTTATT ....:.:.:....::x:.x:.x::x......x.xx...:.::.:.....:x.:x..:x.:x::..:x..:...xx..x:.:...xx.:.:...:..:..:....x....---------..x:..x..:.xxx.x...x:x------.:x.:.xx...::...:.x...:::...x.x:.x.:x......:x...xx.:.x...:... 109M9D22M6I61M 110/192 57.3% 198/94230402 0.0% 15/192 7.8% -41208792 -53021610 +4618 chr4 + 190214555 31880932 31880931 31881050 119 TTTCCCACCTTTTTCCTTTCTTTCTCTTTCTTTCTTTCTCTTTCCTTCCTTCCTTCT---------------------TTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCCTCCTCCTTCCCTCCCTCCTTC chr4 - 94230402 92729564 92729563 92729703 1500700 1500699 1500839 140 ttcctcttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCCC ..:.:.x:..x.....x..:.:.:.....:...:..:.x:...........:x...:---------------------.:.:..:.:.x:..::.....:...:..:..x:.:......:..x....:.:..:..:.::. 57M21I62M 80/119 67.2% 140/94230402 0.0% 21/119 17.6% -60848632 -33381770 +3327 chr4 + 190214555 31881427 31881426 31881483 57 TGTCTCAAAACAAAACAAAACAAAACAACAAAACAAACAAACAAACAAACAAAAACC chr4 - 94230402 4299054 4299053 4299106 89931297 89931296 89931349 53 TGCCTCAAAA----ACACAGGAATACAACAAAACAAACAAACAAACAAAAAAAAACC ..:.......----...x.:x..x.........................x....... 10M4D43M 47/53 88.7% 53/94230402 0.0% 4/53 7.5% 27582373 NA +3446 chr4 + 190214555 31881453 31881452 31881533 81 AACAAAACAAACAAACAAACAAACAAAAACCTGAAGTGAATAGTAAAATTTTGAAAATTATTTTCTCTAAACTTTGCAGCA chr4 - 94230402 51829436 51829435 51829516 42400887 42400886 42400967 81 AAAAAAACAAACAAACAAACAAAAAAAAACTTGAATGAGAAAGAATGACTTTGCATCTCATGGTCTTTATAGTTTGTAACA ..x....................x......:....xx::.x..x.x:.:....x.xx.:..xx...:..x.x....:.:.. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% -19947983 -74282419 +3207 chr4 + 190214555 31884738 31884737 31884817 80 GCTCTATATTTTATAATATTATATATTAAATGCTATATTTAATATAACATATTAAATAACATAATTTATGCTATATAAAC chr4 - 94230402 56109722 56109721 56109801 38120602 38120601 38120681 80 GCTCTACTTTACATATTATTACATATTATGTATAGTGTATAATATTACATATTATGTAGTCTTATTTGTTCCCTATAAAC ......:x..x:...x.....:......x:.::x:.:.x......x........x:..::x.x....:.x.:x....... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% -24224984 -70005418 +3375 chr4 + 190214555 31913245 31913244 31913314 70 CTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCTTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGT chr4 - 94230402 18197126 18197125 18197195 76033208 76033207 76033277 70 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT ..:..:..:xx:x..:.::........::x...x.xx.x........:............:......x.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 13716119 NA +3197 chr4 + 190214555 31918720 31918719 31918780 61 AAAAAAAAATACATATATATATATATATATATATATATATATATATATATACACACACACA chr4 - 94230402 59708331 59708330 59708391 34522012 34522011 34522072 61 AAAACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ....x....:....x......:..xx.xx.x.x.:.:........:.:............. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -27789611 -66440791 +3736 chr4 + 190214555 31918725 31918724 31918797 73 AAAATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATACAC chr4 - 94230402 24136190 24136189 24136262 70094141 70094140 70094213 73 AGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .:...::::........x...:x.xx.:.x......:.....:.....x...x...x..........x..... 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 7782535 NA +3123 chr4 + 190214555 31918729 31918728 31918808 80 TACATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATACACACACACACAGA chr4 - 94230402 8395793 8395792 8395872 85834531 85834530 85834610 80 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA .::..:.:.::...x.:..:...x..:....:...::x..:.:xx.:.............:.:.x.....x.::x.:.:. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 23522936 NA +3291 chr4 + 190214555 31918729 31918728 31918798 70 TACATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATACACA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:....x.:..:...x..:....:...::x..:..xx...:...............x...:.x..:x.:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 23522928 NA +3003 chr4 + 190214555 31918730 31918729 31918791 62 ACATATATATATATATATATATATATATATATATATATATACACACACACACACACACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:.x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 23522926 NA +3066 chr4 + 190214555 31918734 31918733 31918792 59 ATATATATATATATATATATATATATATATATATATACACACACACACACACACATATA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx...................x.:.:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 23522930 NA +3402 chr4 + 190214555 31918735 31918734 31918794 60 TATATATATATATATATATATATATATATATATATACACACACACACACACACATATATA chr4 - 94230402 88147180 88147179 88147238 6083165 6083164 6083223 59 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATA ..:..:..x:x..............:.x.:.:...:.:.............-........ 51M1D8M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% -56228445 -38001957 +3004 chr4 + 190214555 31937229 31937228 31937334 106 TTTCACTGTATGGCAACTCTAATGTCAAGATCTACTTCTGTTTTTTTTTTTTTTTTTTTCCAAATCTTCATTTTGATCACTGAGAAGAGAAGAGTGCAGTAATAGG chr4 - 94230402 88428272 88428271 88428377 5802026 5802025 5802131 106 TTTCACAGAATGAGATTCATGATTCTGGAATTTGTTTCTGGATTTTTTTTTTTTTTTTTCTGGGGATACAGTTTTCTAACAGAGGACAGGAACTTGCAACAATGAG ......x.x...:x.x::x.:..x:::::..:.::.....xx..................::::xx.x..x...xx.x..x...:.x..:.:xx....::...::. 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% -56491043 -37739359 +4027 chr4 + 190214555 31959955 31959954 31960111 157 TTTCATCCTCTTTCTGATCTCACTCATTATTTTTTAGCCTATTGGATATCCACCTCTTCTTAGATCCAAACATCTATCTTCTTTCCTTCCTTCC-----------------TTCCTTCCTTCCTTCCTTCCTGCCTTCTTTCCTTCCCTTCCTCCCTCCCTCTTTCTTTCCTTC chr4 - 94230402 92729531 92729530 92729700 1500703 1500702 1500872 170 ttttttccccttcctctcctccccccccctttttt--cctcttctatttcca--ttttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTC ...:x...:...:..xx:...x.:.x::x......--...x..xx..x....--.:.....xxx.::xxx:x..:..:...:......:x....-----------------..:..:.:..:.:.x:..::.x...:...:..:..x....:....:..x:.......::.... 35M2D15M2D40M17I63M 100/153 65.4% 170/94230402 0.0% 21/153 13.7% -60769576 -33460826 +3352 chr4 + 190214555 31960193 31960192 31960315 123 TTCCTTCTTTTTTCCCTTCCTTCCCTCCTTCCTTCCCCACTTCCTTCCTTCCCTCTTTCCTTCCTTCCTTCCTCCTTTCTCTTTCTCTCTTTCCTTTCTTTCT------CTCTCTCTCTCTCTCTCTCT chr4 - 94230402 45185583 45185582 45185711 49044692 49044691 49044820 129 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x:.x..:x...:..:..:.:.:xx:..:xx..::.::....x...:...::.::..:.x.::...x::::..:.:.:.....xx.....:.......:x..------:....x..x::.x...:... 103M6I20M 73/123 59.3% 129/94230402 0.0% 6/123 4.9% -13225390 -81005012 +20142 chr4 + 190214555 31964590 31964589 31964975 386 TGGAACATTCCAAATGTATTCCTGCAA--------GCTTTTCTTACAAAAAAAAAAATTAGTATTCTGAAAACCCTAATAGTGTGAGTTAAAAGAATAAACGTTTACCTTATTATATTTTCATAACTAGTGAGGAAATGCTAGATTGAGCCTTGGGGAACTAAATATATTACAGGCATGAAAAATGTTTCATTTCTGATGCTGCTTTCAAATGACAGCATAATATGTTATGGATCATTTGATTTTT--------------------TTGTATGAAAACGCTGTTCAGCACCCAAAAAGGCATATGCTGCTAACGGCATGTGTCGCAATCCTTTTTATGACAGCTGGCAACAGGAAAATGCCAGTCAAAACACAAAATGTCAAGCAGAAATTGTCCCAATAAAAAGTATTAGTTT chr4 - 94230402 20617472 20617471 20617882 73612521 73612520 73612931 411 TGAAACATTGCAATTGTTTTGAGAAGAACAGAATCGCCTTTCTGA--AAAAAAATCATTAACATACTGAAAAAAATA-TAATGCCAATTAATAGAATAAATGCTTTCCTCATTATGTCCCCGAATGTAGTGAGAATTTAGTAGACTGAGCCTTGGGGAATAACATGTATTATAAACATGAAAAATGTTACAGTTCTGATGCATTTTTTAAATGACAGCATAATATGTTATGGATCATTTGATTtttatttatttatttatttatttTTGTATGAAAATGCTATTCTGTGCCCAAAAAGGCATATGCTGCTAACGGCATGTGTTGCAGTCTTTCTTATGACAGCTGGCAGCTAACAAATGCCAGTCAAAACACAAAATGTCAAGCAGAAGTTTTTCCCAATAGTAGTATTATTTT ..:......x...x...x..xxx:x:.--------..:.....x.--.......xx....::..x.......xxx..-..:..:x.:....x........:.:..x...:.....:.:::.:x.xx.......:.xx.:x....:..............:x.x..:.....:.::.............x..x.........xx:...:......................................--------------------...........:...:...x.::.................................:...:..:..:...............:.x::x..................................:..x.:..x.xx.:x.......x... 27M8I10M2D30M1D168M20I148M 304/383 79.4% 411/94230402 0.0% 31/383 8.1% 11347118 NA +3130 chr4 + 190214555 32059695 32059694 32059772 78 TTTGTGTAGGGACACAACAAAACCCCCATATAATATATACACACACTATATGTATACACATATATACACACACACACA chr4 - 94230402 60979335 60979334 60979400 33251003 33251002 33251068 66 TTCTTGTAAAAAAATAATAAAA------------ACAAACAAAAACTCTATATATACACATATATACACACACACACA ..:x....:::.x.:..:....------------.:.x...x.x...x...:.......................... 22M12D44M 52/66 78.8% 66/94230402 0.0% 12/66 18.2% -28919640 -65310762 +3800 chr4 + 190214555 32059728 32059727 32059881 154 TATATACACACACTATATGTATACACATATATACACACACACACATATATATACACATACATAT----ACACATATATATATACACATATATATACACACACATCTATATATATATACACACACACACATCTATATATGTATACCATTACTGTTTTGA chr4 - 94230402 73121075 73121074 73121232 21109171 21109170 21109328 158 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGA .:..:..x....xx.xx....xx.x.:.:.::.::..:.:x..:.:.:.........x.x::..----...:.::....x:.....:x:.....:::x::....x..x...:::x:...x.x........x....x:::x..x:.x...:.x..:x.. 64M4I90M 92/154 59.7% 158/94230402 0.0% 4/154 2.6% -41061347 -53169055 +3673 chr4 + 190214555 32059731 32059730 32059856 126 ATACACACACTATATGTATACACATATATACACACACACACATATATATACACATACATATACACATATATATATACACATATATATACACACACATCTATATATATA-TACACACACACACATCTA chr4 - 94230402 4417330 4417329 4417454 89812949 89812948 89813073 125 ATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTAT-TA-AGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ...x.x..x:x.x..x..x...:.....:...........x:x.:...::..::x:x:.x.:.....:...-..-.x:...x..x...:.....:..:...x.....:-:...x....xx....x.. 71M1D2M1D33M1I18M 85/124 68.5% 125/94230402 0.0% 3/124 2.4% 27642401 NA +3177 chr4 + 190214555 32059745 32059744 32059835 91 TGTATACACATATATACACACACACACATATATATACACATACATATACACATATATATATACACATATATATACACACACATCTATATAT chr4 - 94230402 66904840 66904839 66904930 27325473 27325472 27325563 91 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAAT ...x.x..:....:...::...........:.:.:.......:x..x::x..x:.:....:.xx....:::..x:x.x.x..x..x..x.. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% -34845095 -59385307 +3063 chr4 + 190214555 32059793 32059792 32059851 59 CACATATATATATACACATATATATACACACACATCTATATATATATACACACACACAC chr4 - 94230402 7596412 7596411 7596470 86633933 86633932 86633991 59 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCAC ..:.:.x..::.....x..:...........:...x....:.x.:...:..x:..:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 24463381 NA +11316 chr4 + 190214555 32106324 32106323 32106616 293 ATCACTTATGGCATATTACTTAATGATAAATAGTATCATAAATGAAATTGCATGCTATAAAATATCATAACAGAATAAATAAAAC---AGAACTCG-GTGGGTTCATTTTATTTTCCTTGATCCATTAACCAAGCATTGCTATTATCTTCAGTGGCAGAAATGGCTGACAACAAAAGGCTTGCATTTTCTGCTGCTGAGCTGAAAACACAGATTAAGAAACAGGCAGGATTTTTAATAATTTTATTTTGAAGTGTG-TAGATAATCATTCGGCTTTTTTCAGGGGTGACT-AGGGCTGT chr4 - 94230402 20652917 20652916 20653202 73577201 73577200 73577486 286 ATGAATTATAATGCATTACATAATGATAAATGGTCTCATAAATGAAACTGCACGCTATCAAGTATTATAATAGAATAAATGAAATCAGAGTGCTTGTATGGGTTCATTTTATTT-CCTTGAATCATTAACAAAGAGTTGCTATTATCTTCCCTGACAAACACTGTTGATGACAAAAGCTTTGCATTTTCTGCTGCTCAACTACACAGACAAATT------------TGAATGCTGACAAATTTATTTTTTAGAGAGATAGAGCATTATGTTACTTTACCTGTGAGTGGCTCAAGGCTGT ..x.x....:::::.....x...........:..x............:....:.....x..:...:....:.........:...:---..x:..:.-:................-......x:.......x...x:..............xx..:..:.x.:x.:...::.......x:.................x.:..:x.x.x...:...------------x..x.x:.:.:..x........xx..x.x.-....xx..:..x:x:....x::::x.:...:..-.:...... 85M3I8M1I17M1D99M12D30M1I33M1I8M 207/280 73.9% 286/94230402 0.0% 19/280 6.8% 11453407 NA +3202 chr4 + 190214555 32153504 32153503 32153575 72 TATGTGTATATATATATGT-------------GTGTGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTG chr4 - 94230402 70982598 70982597 70982682 23247721 23247720 23247805 85 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ...:.:...x...x:....-------------..........:........::.:.::x:...x.........:...:.:.::.. 19M13I53M 53/72 73.6% 85/94230402 0.0% 13/72 18.1% -38829094 -55401308 +3202 chr4 + 190214555 32153526 32153525 32153605 80 TGTGTGTGTGTGTGTATGTGTACATATATATGTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTA chr4 - 94230402 81401294 81401293 81401373 12829030 12829029 12829109 80 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .:.x.x.....x...:.x.:x.x.......::.:x.x...:..:..x..........:..x..:.x::....x....::. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -49247768 -44982634 +3302 chr4 + 190214555 32153529 32153528 32153628 100 GTGTGTGTGTGTATGTGTACATATATATGTGTGTG-TATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTATGTATGTATGTATGTGTATATAT chr4 - 94230402 35554922 35554921 35555022 58675381 58675380 58675481 101 GTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ..:...x.x.x.:.x.x....xx.x..x..:.:x.-..x......x..x........::.:.....x:.....:.:....:..::.x:x.......x.x.. 35M1I65M 68/100 68.0% 101/94230402 0.0% 1/100 1.0% -3401393 -90829009 +3163 chr4 + 190214555 32153548 32153547 32153613 66 CATATATATGTGTGTGTATATATATGTG--TGTGTGTGTATATATATGTATGTATGTGTATGTATGTA chr4 - 94230402 39267141 39267140 39267208 54963195 54963194 54963262 68 CGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA .:....x........:.:x::::.:...--.........:......x..:..:..x......x..:.. 28M2I38M 49/66 74.2% 68/94230402 0.0% 2/66 3.0% -7113593 -87116809 +3050 chr4 + 190214555 32153554 32153553 32153624 71 TATGTGTGTGTATATATATGTGTGTGTGTGTATATATATGTATGTATGTGTATGTATGTATGTATGTGTAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:...::..:.....:.::::::x:.:.::....x.x......:......x..:....:x:.......:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -39476581 -54753821 +3006 chr4 + 190214555 32153585 32153584 32153647 63 ATATATATGTATGTATGTGTATGTATGTATGTATGTGTATATATATATATATATATAACTTTA chr4 - 94230402 25393253 25393252 25393315 68837088 68837087 68837150 63 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTA ...x.x....:..:................x.:......:.:.:.:.:.:::.:.::x::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 6760332 NA +3169 chr4 + 190214555 32156921 32156920 32156961 41 TTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTGTGTGTG chr4 - 94230402 4919484 4919483 4919523 89310880 89310879 89310919 40 TTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTT-TATGTG ..................................-.:.... 34M1D6M 39/40 97.5% 40/94230402 0.0% 1/40 2.5% 27237437 NA +3269 chr4 + 190214555 32156922 32156921 32156967 46 TTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTGTGTGTGTGTGTG chr4 - 94230402 46886519 46886518 46886564 47343839 47343838 47343884 46 TTTTTTTGGTGGTTTTTTTTGTTTGTTTGTTGTGTGTGTGTGTGTG .....x.x..x...x................x.............. 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% -14729597 -79500805 +3075 chr4 + 190214555 32160486 32160485 32160548 63 CTTGCTCTTTCCTTCCCTACATCCCTTCCTTCCTCCTTCTCTCCTTCCTTCCCTCCCTGTCTT chr4 - 94230402 27426817 27426816 27426879 66803524 66803523 66803586 63 CCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTT .:..:...:.....x.....xx...:.....::..:.::...::..::...::..:...::.. 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 4733669 NA +7021 chr4 + 190214555 32161066 32161065 32161414 349 GAAGAGAAAAAAATGAAAGCAGAAAAAATAATTTTGAAGTTAATAGAAGAAAATGTAGTGGAA----------GGTTTATCTTATTCAGAATTTT----GATGAGATCATGTTTTTATTTGCCCT------TACCCTTAGTATTAAGTAGTGCACATTTCTTTCCTTCGAACTAAATTCTATGAATTGAAAATAACTTCTAGACTTTAACTGATAGGAAAGTCCTACCTCAGAATACTTCAACAGCTCTCTTTGAAAATTGGCTCTCTTTGTTTAATGTCAGCATTTTGTGAGGCTGCTCAGTTCCTACAGTGACAGAAATTTTAGGAAGAAAATAGCCTCAAAGAAATAATAAGCTGTTGAATTCTCA chr4 - 94230402 20678398 20678397 20678743 73551660 73551659 73552005 346 GAAGAATAGAAAAGGACAG----GATGATAGTTCTGACACAAATTGTAAGAAACAAATTAAAAAAGCAAAGCAGGTTTATCCT---TAAAATCTTTTCAGATAACTTTTTCCATTCATCTGTGCTAGCAGCtattttttttattt---------tatttttttttCCCAGTTAAAACCACACAAATTGCAAATACC--CTAAGGTCTGGCTCATACAAAGATGCTGTTCTAGAATACTTAAGTCGCTCTCTATGAAAATTGGGTCTTGTGGCTTAATGTTAGCACTTTCAG----TGTTTGGTTTCAGAAGTGACAGACATTTTGGTTGGAAAA-ATCCTTAAGAAAGTAACAAGCTAATGAATTCACA .....:x.:....x..x..----:.x:...:..:...x::x...x.x.::...::x.x.::..----------........:.---:.:...:..----...:.xx.:x.x:x..:..:..:x..------..:::..xx....x---------:....:...::::.::x:x...::x:.::.....x.....x.--...::x.:.::..x...x:..::.x..:::::.........x.::x.......x..........x...:x.x.:.......:....:...xx.----..:.::...:.x:x.........x.....:.xx:.....-.x...:..::..:...:.....:x.......x.. 19M4D40M10I10M3D9M4I26M6I14M9D42M2D93M4D39M1D34M 209/326 64.1% 346/94230402 0.0% 43/326 13.2% 11482668 NA +3168 chr4 + 190214555 32164992 32164991 32165061 70 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGCAGCTGG-GCTACAGATG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx:x..:.............x...x..x.x........::.:..:......-:.....x:.. 60M1I10M 51/70 72.9% 71/94230402 0.0% 1/70 1.4% 13967866 NA +16912 chr4 + 190214555 32186228 32186227 32186532 305 GCTAAAGGAATTGCTGTCCTCTGTTCTGTTCCTGTCCACCTCAGCACTTTTGATCTCTGGGGCATGCTGTTGGTCTTAACCATAAATTGAAAATGAGAGGCAGAATAATTAAAGAGCAAACTGTAATTATGACCAAGATCTAAAGAGAGAAAAACTAACATTG--AGTATCGGCCTTCAATTTCCTATTAGTGCATTTAAGATTAGCTATAAACAGCCTTGTTAAACTCAATTAAATAGTTCATCAGAAGGATTTTTCT-TATTAGTACAGGCTGAGTGATGTGACTTTTAGAACCATGTTGCTGGTT chr4 - 94230402 20680546 20680545 20680853 73549550 73549549 73549857 308 GCCAAAGAAGTTTATCTCTGCTGATTCACCAGTGTCCACCTCAGCACTTCCAGCCTCCAGGGCAAGCTGTTGGTCTTAATCATAAATTGAACACGTGGGGAAGAATAATTAAAGATCAAACCGCAATTATGAGCAACATCCAAAGGGAGTAAAACTAACATTGAAAATATAGGCCTTAAGTTTCCTATTAGTGCATTTAGGATTAACAATAAACCATCTTGTTCAACTTAGTTAAATAGTTCATTATATGGATTTTTCCATATTAGAACAGGGTAAGAGGCTTAACTTTTAGAACCATACTGTCTGTT ..:....:.:..xx.x..:x...x.:::::xx.................:::::...::.....x..............:...........x.:.x.:..x..............x.....:.:........x...x...:....:...x.............--.:...x......x.:...................:.....:.x......x::......x....:.:.............:.x.x.........:-......x.....x.:..x.::x.:..............::..::x... 163M2I94M1I48M 237/305 77.7% 308/94230402 0.0% 3/305 1.0% 11505682 NA +3323 chr4 + 190214555 32218435 32218434 32218515 81 CTGCAACCTCTACCTCCTGGGTTCAAGTGATTTTTCTGCCTCAGCCACTCAAGTAGCTGGGATGACAGGTGTGTGCCACCG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG ..:..:..:xx.x..:.............x..:x:xx.x.......x:............:.:x...--:...::....:. 67M2D12M 56/79 70.9% 79/94230402 0.0% 2/79 2.5% 14021309 NA +22819 chr4 + 190214555 32233663 32233662 32234183 521 ATTTACATTTTCCTTCCTAATACTCTCAGTA----TTCTTATATGAAGACTGAATGCCTGTTACTTGAATATATTTAGCTCAGTATCTTATCATGGCGCATTTTACATTGAAATATTTTGATAATTAAAGTTTCAATGGGTGATTTTTTTAATTTATGAACTACATTATTATTTTATGTACATTTAAATTTACATCCTGAATTAGTAGCTTGTATTATTGTCATTAAGAAAAAATAGAAAAAAAATACTAGCAATTATAAACAGTA--TGAGTTGATATAAGCATTTTTGTTAGCCCTGAAGTCATTTTAATAGTTTTATTGTCTTAATCAACTTACTCAACTCTCTTTATTGCTCTTTGGAGGTGGTAGTTTTGAACACATGCT-GGGCGTTAGTTCACTGGTGCCAAATTAAAAA-TGATAATTCTCATGCGTGAAATAACTGTATGGACTAATGACCAAATATCTTTATAATGTGAGCCACTGTTGCAGCAGGTGGCCAAACAATTAGACACCATAACATAATATA chr4 - 94230402 20703232 20703231 20703738 73526665 73526664 73527171 507 ATTTACACTTTCATTCCTGGAAGACACATGAAAGCTTCCTACATTGATA--AAATG---ATTACTTTAACCAAATAAGTGCAGTATGTTA--------CATACTACACTGAAATATCTCCATAATTAGTATTCTAAGGGGTAATTTCGTAAATTTATAGGACTCATTACTACTTTATGGACATTTTAATTTACTATTTGAATTAGTAGTCTACATTAGTGACATTAAAAAAAAA-------AAAGTACAAACAATTATAAACACTAAATGGGATTGAGTAAGCATTTTTGCTAGCCCCAAAGCTATTCTGACAGTTTTATTGTCTTAATCAACTTAGTCAACTCATTTTATAGCTCTTTTGAGGTAGATGTTGTGGACACATGCTGGGGTACTAGTTCACTTCTGCCAAATTAAAAACTGATATTTCTCATGCGTGAAATAACCTCATGGACTAATGACCAAATCTCTATATAATTTGAACTGAAGTCCCAGCAGGTGG-CAAACAATTAAACA-CATAAGATAATTTA .......:....x.....::x.xx.x..xx.----...:..:..x:.x.--:....---:......x..:xx.x.x..:x......x...--------...x:....:........:.:x.......:x:..::..x....:....:x.x.......:::x:x.....:..:......x......x.......xx::...........::.::....x..x......:......-------...:...x.:............x..--..:.x.x:x:............:......::...::...:.:.:........................x.......x:.....x.......x.....:.xx...x..:.........-...:::.........xx..............-.....x...................:x:..................x...x......x...:.::xx..:x..........-..........:...-.....x.....x.. 31M4I14M2D5M3D31M8D136M7D25M2I117M1I31M1I81M1D14M1D14M 386/499 77.4% 507/94230402 0.0% 30/499 6.0% 11530431 NA +13350 chr4 + 190214555 32243995 32243994 32244251 257 CTGCACAAGATATTTTCAGCTA---TAGTAACATGGGCATGTAGACAGAGGTGCTCAGCTGCTTACATTTTCACACAAATGTGGGAATGGAAGCCTGAGGCAATGTGAATAGCAGCTCTCCAAACTTCAAAGAATCTGTGAAGGATTCTTGCTCAGCTCTTGCCATCCTGAATTGGCCTATGCTCGGGGAGCAATTAAAATTAAATAGCCTCTGAACAGCAAAATGTGAAAAGCTCTAGTTCTGAGTATGAACATACTCT chr4 - 94230402 20709010 20709009 20709269 73521134 73521133 73521393 260 CTCTACAAGACATTTCCTGTTAAGTTAGTGTTGTACCATTTTCAACAGAAGTGTTCAGCCGCTTACATTTTCACATACCTTTAAGAATGAGAGCCTGAGGCAATCTGAATACAGTCTTTTCAAACTTCAAAGGAGCAGTGAATGATTTTTGCCCTGCTTTTGCCATCTAGAATTGGCCTAAGCTTGGGGAGCAATTAAAATTAAATAGCCGCTGAACTGCAGAAAGTGAAGATCGGCAGCTCTGGGCATGAGCAGACTTT ..x:......:....:.x.:..---....:x::.:xxxx.x.x:.....:...:.....:...............:.xx.x.::.....::.............x......xx:x..:.:............:.x.x.....x....:....:.x...:........:x...........x...:.........................x......x...:..x.....:.x.xx:..:....:.:....:..x...:. 22M3I235M 194/257 75.5% 260/94230402 0.0% 3/257 1.2% 11534985 NA +3160 chr4 + 190214555 32246203 32246202 32246304 102 ACATATACAAATAAAAAGAAAAAAAAAGGAAAAAAAGGAAGAGTGAACTACTACTACACCTGACTAT---CTACATAGGAGAATGTAAAGTATTAAATTAAGAGA chr4 - 94230402 10862967 10862966 10863067 83367336 83367335 83367436 101 ACACACACACATGAATAGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACAAAACAGAGAAG----AAAGGAAGAGA ...:.:...x..:..x...........::.........:x.:.x....x.xx..x...x....xx..---.:.....x:.:.xx.x:...----...xx...... 67M3I20M4D11M 70/98 71.4% 101/94230402 0.0% 7/98 7.1% 21383236 NA +3420 chr4 + 190214555 32259196 32259195 32259292 97 TCTCTTTCTTTCTTTTTCTTTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTTCTTTCGTTCTCTCTCTCTCTTTCTTTCTTTCTTTTT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:..:::....:....:......:.x......x.x:::.x:...xx.:..xxx:.:..x.:.:.:x:.............x.xx:.::......:. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% -10822732 -83407670 +3013 chr4 + 190214555 32265733 32265732 32265785 53 AGAGGGAGACTCTGTCAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGTATC chr4 - 94230402 26441030 26441029 26441082 67789321 67789320 67789373 53 AGAGGATGGCTCTGAAAGGAAAAAGAAAGAAAGAAGGGGAAAAAAAAAGCCTC .....:x.:.....xx..:................:.::.:...:....:x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 5824703 NA +3328 chr4 + 190214555 32274389 32274388 32274443 55 TCTGAGGTTAAGAAACCCCTGTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTT chr4 - 94230402 20788965 20788964 20789019 73441384 73441383 73441438 55 TTTAAAATTTAAAAGTTCCTGTTTTTTTTTTTGTTTGTTTGTTTTGCTTTTTTTT .:.:.::..x.:..:::...................x...x.....:........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 11485424 NA +3444 chr4 + 190214555 32287604 32287603 32287688 85 GAGTATAAGAACTTCTTCTATG---------AATTTTATACTTTAGAGCTGGAAAGAACTTTATAAACATTAAATAATTAATTCTTATAACACT chr4 - 94230402 24418721 24418720 24418814 69811589 69811588 69811682 94 GGGTAGAAAGTTTTCTTTTATGTCTTAATAAAGCTTAATACTTTAATTTTATGAAGTACTTTCTAAACACTAACTAATTAATCTTTACAACACT .:...x..::x:.....:....---------.::..x........:xx:.:x:...x.....x......:...x........::...:...... 22M9I63M 61/85 71.8% 94/94230402 0.0% 9/85 10.6% 7868883 NA +6648 chr4 + 190214555 32291297 32291296 32291630 334 AGTAAACTCCATTAGTGCTGTGTCATGAGCTCAAGCCCATCAAACTTTTGTAAAATATTTTCAATGTTCTGGGATGTGACAAGGCCATTATAGGTTAATTTAGTATGCAATATTTTTA-CAAATACATACAACTTTTATTATTTTCAGGAATTAAAAATCATTCACAAAAGTGGTTTACATAAAACGAGTTTAATTAAGTAATTTGTTC-TTCCCCTGTGACATTCTTCACACATGATTGAAGACACAGGCTGAATAAGCATCATCATTTTTAATAATTTCAACATGTTCTGCTAAGTGCAAAAAAACCCAGATGTAATTGTGAAAAACTATTACA chr4 - 94230402 20728569 20728568 20728881 73501522 73501521 73501834 313 AACAACCCTTATCAGAAACATGTCTCAGGTTCAAATCTATTAGA---------AAAACCTAAATTGTTCCT--ATATGATGGAGACACTGTGGTTTGATTTCATGATTGACGTTCTAAGCAAGTATTCACG--TTCCCTTATTTACTGTAACTGAAAGCCACTCATAAAAATTTTT------AAGAAGTTTTACATAAATGATTGTCACATTATCTTATGACAGTCTTCACACTTGATAGAAGACAGAAGCTGAATAAGCATAATCTTTTCTTATAATTTCCATGTAGTCTGCTAAATCTTAGAGAGCTA----GTAATTATGATTAAATTATACA .::..x.:::..:..x:x::....x:::.:....::.:..:.:.---------..x.::.xx.x.....:x--..:...::::.x..:.:.:.x..:....x:.:xx::.::..:.x.-...:..:x:..:--..::x......x.x.x..:.:...::..:...:....:.xx..------..:x::x....xx...:.:...xx:x.-..x:.:.:.....x.........x....x.......x.:.............x...x...:.x........x.::.:x........:.x:x.:.:.:.:x----......:...xx..x.xx.... 44M9D18M2D45M1I12M2D43M6D27M1I100M4D22M 193/311 62.1% 313/94230402 0.0% 25/311 8.0% 11562728 NA +3254 chr4 + 190214555 32296194 32296193 32296270 77 ATTATATATATTATATATATACATAATATATATACATAATATATATACAC-ATAATATATATAATATATGATATATCT chr4 - 94230402 15418488 15418487 15418565 78811838 78811837 78811915 78 ATTATATAAGATATATATATCTATCATATATATACATAAGAGATATATACAAGAGTATACAAGAGATGGGATTAATCT ........x:x.........x:..x..............x.x.....:..-.x.:....:.x:.x..:x...xx.... 50M1I27M 58/77 75.3% 78/94230402 0.0% 1/77 1.3% 16877706 NA +3070 chr4 + 190214555 32296299 32296298 32296354 56 AATATATATACACACATGCACACACACACACATACACACACACACACACACACACA chr4 - 94230402 8395807 8395806 8395862 85834541 85834540 85834596 56 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:..:...x:...:...:.::.x:...:xx...................x..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 23900492 NA +6370 chr4 + 190214555 32321262 32321261 32321666 405 CCTTCAAGCCTCTCTTGTGCCTGTTTTGTAAAAACAATTTATCAAAGACAACATGCTTTTATTCTCACAACTCTTCAATTTTATTTACAGACCATAGATACAGAAATGCAATTACTTTGCAAATGTAAGAGTATCTGGAGACATGTACT-CTTAACCAATGTGACTTTACTTAGGTGCCTTATGAACTCTTAACTTCTTTGTAATACCTGAATCAAAAGTATTAGTTATTGTTGTCCTTCACTCAGAATTCTAGGTTAGGAAGTGCCTAAGGCATGGCAGAGTTATAGTGAATAGCAGGA----GCTTTGCAGGCCTATGATTCCGCATGTGTTCCTGGCTGTTTCTTTGTTGTCGACTACAGAAAATGGGATGGAT----CTGTTAAGTATCCATGCTGATGCTCTCCAGAGA chr4 - 94230402 20740468 20740467 20740868 73489535 73489534 73489935 401 CCTTGTGGCCTCTCTTATTTATCTGTTGTAGACA---TTTCTATGAGTTA------CTTCATTTTTAGTAAATTTGGTTTTTATTTACAGTTTGTAGAAAGGGGAAAGCTATTTCAATTAAGGTG-AAGATCATTTAAGTTTCTCTGCTGCCTAACCAAATTGTTTTTATTTATATACTTAAAATAGTCTTAAAATCCTTAGAACACTTGAAACAAAAGTAAAAGTTATTTTTGTCCTTGAGTAGAAATTTTGGGTCAGAAAAAGCCTTC--CATGAGGGACTACTGTTCCAGGGTAAGATATCTATTTACATTTATGCAATTCTTTGTGT-TTCCTTTTTGGTTCTCTGATCTTGTCTAAAGAAATTGTGATTAACTAAACTATGAATTACTGATGTTAGCTATCTCTAGAAA ....xx:.........:.x:x.x.x.....:.x.---...x.xx:..x:.------:..:...:.:.xx.xx:..x:x............x:::....x.x:.:..x..x...x.xx.xx.::..-....x:..:.:::xx:x.x.:..-.:.......xx..x:....:...x:.:.:.x.x:x.x......xx..:..:x..:..:....x........xx.......x........x.x.x::....:.:...:..:..:x....xx--....:x:..x.xx.:x.xx.x:.:.:..----xx...:..xx:x.:::....:x::...-.....xx:..x....:..x.x.:.x...x.....x..x...x:.:----..:.x..x..::x...:.:::xx....:...:. 34M3D13M6D69M1D23M1I120M2D28M4I27M1D45M4I33M 238/392 60.7% 401/94230402 0.0% 22/392 5.6% 11580794 NA +3006 chr4 + 190214555 32334131 32334130 32334216 86 TTTCATAATACTGATGCAGTTTTATTTATTATAGTGTATTTTCATTTTGGATTTCATCTTTAAAAACTACATCATAAGTGGAGTAT chr4 - 94230402 36698187 36698186 36698272 57532131 57532130 57532216 86 TTTCAGAGGACTGTTATAGTTTTATTTTTCAAAGTGAACTTTTATTTTCGACATCTTTTGAAATGATTACAGCAATTGTGTAGCAT .....x.:x....x.::..........x.:.x....x.:...:.....x..:x..x.:.xx..x:.:....x..xxx...x..:.. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% -4364056 -89866346 +3099 chr4 + 190214555 32345535 32345534 32345610 76 TGTGTATATATGTGTATATATGTATATATGTATATATGTGTATATATGTATATATGTGTGTGTATATATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATA ......:...:x........::.::.:.x:.....xx........:.....:...x:::::::.---......... 64M3D9M 51/73 69.9% 73/94230402 0.0% 3/73 4.1% -5017505 -89212897 +3107 chr4 + 190214555 32381542 32381541 32381613 72 AAAAATAAAGATTTGCTATTTTTACAAAATCGTAATTATATGTGTATATATATATGTGTGTATATATATATA chr4 - 94230402 35241730 35241729 35241799 58988604 58988603 58988673 70 AAGAATAAA--TTTGTCATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATA ..:......--....::..xx:..:...xx.x..x.x.x.::...x......:................... 9M2D61M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% -2860188 -91370214 +3195 chr4 + 190214555 32399130 32399129 32399243 114 AAATATTTTCTCTGTGTTTCATATTGAGAAACCAGAAGTATGTGTGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATA chr4 - 94230402 81401260 81401259 81401373 12829030 12829029 12829143 114 AAATATTTCTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ........::..x.:xxxxx..:xx..:...xx.x.xx.x.....x.....x..x.x.......::.:x.x..:::...:x..........:.:x....x::.:..x..:..:. 114M 71/114 62.3% 114/94230402 0.0% 0/114 0.0% -49002130 -45228272 +3157 chr4 + 190214555 32399152 32399151 32399245 94 ATTGAGAAACCAGAAGTATGTGTGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATA chr4 - 94230402 81401280 81401279 81401373 12829030 12829029 12829123 94 ATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ..x.:....xx...x:.x.x.....x.....x..x.x......:::.:x.x..:::...:x..........:..x:...x::.:.:x..:..:. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% -49002128 -45228274 +3294 chr4 + 190214555 32399156 32399155 32399247 92 AGAAACCAGAAGTATGTGTGTGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATATATATACA chr4 - 94230402 19704260 19704259 19704350 74526053 74526052 74526143 91 AGCAACCTGAAGCA-ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ..x....x....:.-:.x.:x:.:::......::.....:.x.....:...x::..............x..x.xx....x.x.xx..x.... 14M1D77M 63/91 69.2% 91/94230402 0.0% 1/91 1.1% 12694896 NA +3132 chr4 + 190214555 32399226 32399225 32399278 53 TGTGTGTGTGTATATATATACATATACTGGTATATATATATATATACACACAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .............:.:.:.......::.x:..x..:.:.:.::.......... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -38583403 -55646999 +3477 chr4 + 190214555 32399461 32399460 32399583 123 GTATATATATATATACATATACTGGTATATATACATACATATACTGGTATATATATATACATATACTGGTATATCTATATATATATACACACACACACACACACACACACACACACATATATA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACAC------ATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAG--------AGACACACATGTATA ..:.::..::....x....:..------.......:.x.x::.:x:...:...::....x:..:..x:......x.:x:..:.....x.:..:.x....x--------.x........:.... 22M6D72M8D15M 74/109 67.9% 109/94230402 0.0% 14/109 12.8% -40721640 -53508762 +3003 chr4 + 190214555 32399494 32399493 32399569 76 CATACATATACTGGTATATATATATACATATACTGGTATATCTATATATATATACACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:::.:..:xx..::...x.:..::..x...xx:.:...x:x..:..xx...................x..... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 24003707 NA +3252 chr4 + 190214555 32399498 32399497 32399581 84 CATATACTGGTATATATATATACATATACTGGTATATCTATATATATATACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.::xx:.:.:.::...x....:..:.x::....x...::x..:..xx.:.................x.....x.::x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 24003711 NA +3407 chr4 + 190214555 32399507 32399506 32399585 79 GTATATATATATACATATACTGGTATATCTATATATATA--TACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 8395790 8395789 8395870 85834533 85834532 85834613 81 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:...:.:.:....x..xx....x.x:....:...:--....:xx.:.................x.....x..:x... 39M2I40M 58/79 73.4% 81/94230402 0.0% 2/79 2.5% 24003717 NA +4171 chr4 + 190214555 32399510 32399509 32399645 136 TATATATATACATATACTGGTATATCTATATATATATACACACACACACACACACACACACACACACATATATATATACACACATATACCGGTATATGTGTGTGTATATATATATAC--ACACACACACACATATATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAACTGTAATCTC---GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:..:.:x:...x.x....xx..x..---:.:.::..:..:.:x..:.....:.:.....x.x:..::x:..:...:::.:.x:..:..x:.........x..::.....x...::.--...x.x........:.... 26M3D88M2I19M 86/133 64.7% 135/94230402 0.0% 5/133 3.8% -40721565 -53508837 +3191 chr4 + 190214555 32399569 32399568 32399647 79 ACACACACATATATATATACACACATATACCGGTATATGTGTGTGTATATATATATACACACACACACACATATATATA chr4 - 94230402 37363045 37363044 37363112 56867291 56867290 56867358 68 ACATACTTGTATATACATGCACAAATATATTGGTGTATATGTG------TATGTATTCACACACA-----ATATGTATA ...:..x::......:..:....x.....::...:...:....------...:...x........-----....:.... 43M6D16M5D9M 54/68 79.4% 68/94230402 0.0% 11/68 16.2% -4963476 -89266926 +3259 chr4 + 190214555 32399570 32399569 32399653 84 CACACACATATATATATACACACATATACCGGTATATGTGTGTGTATATATATATACACACACACACACATATATATATACATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::::...:.:.::.:.x....:..::x::......:..:x..:..xx...:...............x.:.:.x..:x... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 24003783 NA +3132 chr4 + 190214555 32399589 32399588 32399659 71 ACACATATACCGGTATATGTGTGTGTATATATATATACACACACACACACATAT--------ATATATACATATACCAG chr4 - 94230402 56650830 56650829 56650908 37579495 37579494 37579573 79 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATGGCCCAAGGTAAAGCCATATACTAG ...:x.::..x.x......:.....:..x......:.:.........:.:....--------:..x.xx.......:.. 54M8I17M 53/71 74.6% 79/94230402 0.0% 8/71 11.3% -24251241 -69979161 +3088 chr4 + 190214555 32399608 32399607 32399649 42 TGTGTGTATATATATATACACACACACACACATATATATATA chr4 - 94230402 64433220 64433219 64433261 29797142 29797141 29797183 42 TGTGTGTATATATATCTACACATACACACGCATACGTATGTA ...............x......:......:....::...:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -32033612 -62196790 +3606 chr4 + 190214555 32399621 32399620 32399743 123 ATATACACACACACACACATATATATATACATATACCAGTGTGTATATATATACACACACACACACATATATATACACACACACTATATATATACACATATATACATATATATACATATATAC chr4 - 94230402 26715434 26715433 26715542 67514861 67514860 67514969 109 ATATAAAATTACACAC-----TTTATTTAAATGTAC---------TATATATTCATACCCACATACATATCTATAAATACCCACCCAAAATATGGACACATGTGCATGTAAACACATTTCTAC .....x.xx:......-----.x...x..x..:...---------.......x..:..x....:......x....x.:..x...:xx.x....:x...:..:.:...:..x.:....x.x... 16M5D15M9D78M 79/109 72.5% 109/94230402 0.0% 14/109 12.8% 5684187 NA +3165 chr4 + 190214555 32399666 32399665 32399736 71 TATATATACACACACACACACATATATATACACACACACTATATATATACACATATATACATATATATACA chr4 - 94230402 67999876 67999875 67999946 26230457 26230456 26230527 71 TGTATGTGGACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGACTTGCA .:...:.:x.........::.........x..::...xx..........::..:.:.x.x.:.x.:x.:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% -35600210 -58630192 +3153 chr4 + 190214555 32399695 32399694 32399795 101 ACACACACACTATATATATACACATATATACATATATATACATATATACACACACATATATACACATATATACACATATGTACACATATATACACATATAT chr4 - 94230402 27943528 27943527 27943628 66286775 66286774 66286875 101 ACAAATAAAATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x.:.x.x..x::...:..xx:.:..:....::.:.x:::.::.x.:.::.....:...:::.x:.....:x..x....x......:..x....::.:. 101M 60/101 59.4% 101/94230402 0.0% 0/101 0.0% 4456167 NA +3064 chr4 + 190214555 32399722 32399721 32399784 63 ATACATATATATACATATATACACACACATATATACACATATATACACATATGTACACATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x...:.x.......:....:.:x.::.x.:....x...:...:.:.:..... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 14878973 NA +3091 chr4 + 190214555 32399725 32399724 32399791 67 CATATATATACATATATACACACACATATATACACATATATACACATATGTACACATATATACACAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .......:...:..:.:.....:...:.:.:...:..x..x::x..x:....:...xx:....:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -34505121 -59725281 +3363 chr4 + 190214555 32399730 32399729 32399844 115 ATATACATATATACACACACATATATACACATATATACACATATGTACACATATATACACATATATACACATATATATACACATAT--ATACACATATATATATACTGGTTTTGTTT chr4 - 94230402 27943543 27943542 27943659 66286744 66286743 66286860 117 ATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGTTGGTGAAAGTAAATTTTTTCTGATTCTGATT ...:..xx:.:......::..:.x:.:::..x....:.....:.:.:::.x:.....:x..x..:.x......:..x:....:.:.--:.:x.x:..x..x.x.x...:..:..x.. 86M2I29M 71/115 61.7% 117/94230402 0.0% 2/115 1.7% 4456187 NA +3272 chr4 + 190214555 32400628 32400627 32400683 56 AGTGAGAAAACAAAACAAAACAAAAAAACAGGAAAAAACTTCCCAAGGAAATGACA chr4 - 94230402 50339938 50339937 50339993 43890410 43890409 43890465 56 AGAGAGAAAAAAAAACAAAACAGAACAACAGGAAAAAAATACCTACAGAGAGGACA ..x.......x...........:..x............x.x..:.x:..:.x.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -17939310 -76291092 +3533 chr4 + 190214555 32406469 32406468 32406619 151 AATTTGTGTGTGTGTATATATATATATATATACACACACACAAATATATATGTAGTTTCCAAGAATATGTATATAAATATATATTTCTGTGCATTTATGTATGTGTCTATACATAGAAGTGTGTGTGGTTATACATATATA----TACATATGCT chr4 - 94230402 10689355 10689354 10689504 83540899 83540898 83541048 150 AATATGTATCTCAGTTTATATGCATATGTGCCTGCACACATAAAAAAATATGTATTTTCTATGATTATATATAT--TCATTTACTGCAATGTACATAATCATG---CTATATCAGTGGGTTTGTGTGTCTATATTCATGTAATTTTAAATGTGCT ...x...:.x.xx..x.....::....:.::x::......:...x.x.......x....:.x..x...:.....--x:..x..:.x.x:..:.:x..xx:...---.....:xx:x::..x......x:....:x:..:..----..x..:.... 74M2D27M3D35M4I10M 95/146 65.1% 150/94230402 0.0% 9/146 6.2% 21717114 NA +3399 chr4 + 190214555 32406469 32406468 32406534 66 AATTTGTGTGTGTGTATATATATATATATATACACACACACAAATATATATGTAGTTTCCAAGAAT chr4 - 94230402 64433212 64433211 64433277 29797126 29797125 29797191 66 AATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAAT .....x.x...............x..:.:........:..:.x:...:....:x:.x.x..::... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -32026743 -62203659 +3126 chr4 + 190214555 32406478 32406477 32406582 105 GTGTGTATATATATATATATATACACACACACAAATATATATGTAGTTTCCAAGAATATGTATATAAATATATATTTCTGTGCATTTATGTATGTGTCTATACAT chr4 - 94230402 87985345 87985344 87985441 6244962 6244961 6245058 97 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTAT--------ATATATATACGTGTCTACATGT ......:.........x....:....x.x:...x.x:Xx.x.x:..:xxx:.:.:.::........x..x.:...--------..x...:..:.......:.::. 75M8D22M 65/96 67.7% 97/94230402 0.0% 8/97 8.2% -55578867 -38651535 +3092 chr4 + 190214555 32412711 32412710 32412779 69 AATACCTCTACACAAATAAACTAGAAAATCTGGAAGAAATGGATAAATTCCTGGGCACATACACTCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC .......x.xx::...:x.:..::x.x............x.....x:...:......:.:.x.::.... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 16029140 NA +3091 chr4 + 190214555 32484129 32484128 32484185 57 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTGTAGAGACGGGGTCTGG chr4 - 94230402 34493734 34493733 34493790 59736613 59736612 59736669 57 TATGTATGTTTCTGAGTGTGTGTGTGTGTGTATTTGCCCCCTGTAGGTGGGGTCTGG .:...:...x.x..x................:....::::x.:x..::......... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -2009605 -92220797 +10557 chr4 + 190214555 32486041 32486040 32486393 353 CTGTGTTTTTTTCTTTTTAAAATACCCTTTAACGCAACTCTTTAGGAAGGAC--AAGGCAACTTCTTAAAGTTCTGCTTAGGTTCTCAGGAAATGTCATTCATTTGGCAGGGATCCCAATGTGTAGCACAGCTTGATTCCC-TGCACAGTCCCCAAAACAGCCAGGCCTGAGACTACGAAGCTCTTTCAATGACAGGCATTCATTCATCTGAACTTATTCTGAACTCAGAGAATACACTTAAAAAAAAAC-AACAACAAC-AACAAAAT---TACTTTGAGAGGAACATTCTGAGGTTTTTGCAAC---TAAGTATTTC--------CTCTT--TAAAAGTTTTTT-----------TTTTTTTCTTCCTGTAGAATGGTTTTAA chr4 - 94230402 20793135 20793134 20793500 73436903 73436902 73437268 366 CTCTCTTCATCTTCTCCTTAGGTTCCCTTTAACCCTACTGTTTAAGAAGGGACAAAGACAACTTCTTAAAATTCTGCTTATGTTCCCGGGAAATGTCATTCGTTTGGCAGGGATCCTAAACAGTAGCACAGCTTGATCCCCTTGCACAGCCCAACACACAGCCAGACCTGACATCAGGAAGCTTCTTTCATGACTAACATAAATTAAGCTGA-------------------AACACAGTTGTAGAATAATGAATAATGACTTATAGAATGGACATTCTGAAAGGCAGATTCTGCTGTCTCTTTAACAGGTCAGTTTTCTGACCTAAACTCTTACTAAAAGTAGTTTGGTAAAAATAGTTTTGTTTTTTTTTTAAATAGGGTTTGA ..x.x..:x.:.::.::.x.::.x.........x.x...x....:.....:x--...:............:.........x....:.:.............:..............:..xxx...............:...-.......:..xxx.x........:.....x.::.x......::..:x.....x::...xx...x.x....-------------------..:...x..:x.:..x..:-..:..::..-x.:.:...---:.:.:...:...x.x......xx..:.:.x:...---.x...x..::--------.....--.......xx...-----------....x..:..::.x..:.xx..x...:. 52M2I87M1I70M19D19M1I9M1I8M3I34M3I10M8I5M2I12M11I28M 242/334 72.5% 366/94230402 0.0% 51/334 15.3% 11692906 NA +10631 chr4 + 190214555 32486041 32486040 32486393 353 CTGTGTTTTTTTCTTTTTAAAATACCCTTTAACGCAACTCTTTAGGAAGGAC--AAGGCAACTTCTTAAAGTTCTGCTTAGGTTCTCAGGAAATGTCATTCATTTGGCAGGGATCCCAATGTGTAGCACAGCTTGATTCCC-TGCACAGTCCCCAAAACAGCCAGGCCTGAGACTACGAAGCTCTTTCAATGACAGGCATTCATTCATCTGAACTTATTCTGAACTCAGAGAATACACTTAAAAAAAAAC-AACAACAAC-AACAAAAT---TACTTTGAGAGGAACATTCTGAGGTTTTTGCAAC---TAAGTATTTC--------CTCTT--TAAAAGTTTTTT-----------TTTTTTTCTTCCTGTAGAATGGTTTTAA chr4 - 94230402 20787664 20787663 20788029 73442374 73442373 73442739 366 CTCTCTTCATCTTCTCCTTAGGTTCCCTTTAACCCTACTGTTTAAGAAGGGACAAAGACAACTTCTTAAAATTCTGCTTATGTTCCCGGGAAATGTCATTCGTTTGGCAGGGATCCTAAACAGTAGCACAGCTTGATCCCCTTGCACAGCCCAACACACAGCCAGACCTGACATCAGGAAGCTTCTTTCATGACTAACATAAATTAAGCTGA-------------------AACACAGTTGTAGAATAATGAATAATGACTTATAGAATGGACATTCTGAAAAGCAGATTCTGCTGTCTCTTTAACAGGTCAGTTTTCTGACCTAAACTCTTACTAAAAGTAGTTTGGtaaaaatagtttttttttttttttaaataGGGTTTGA ..x.x..:x.:.::.::.x.::.x.........x.x...x....:.....:x--...:............:.........x....:.:.............:..............:..xxx...............:...-.......:..xxx.x........:.....x.::.x......::..:x.....x::...xx...x.x....-------------------..:...x..:x.:..x..:-..:..::..-x.:.:...---:.:.:...:.:.x.x......xx..:.:.x:...---.x...x..::--------.....--.......xx...-----------.......:..::.x..:.xx..x...:. 52M2I87M1I70M19D19M1I9M1I8M3I34M3I10M8I5M2I12M11I28M 242/334 72.5% 366/94230402 0.0% 51/334 15.3% 11698377 NA +3325 chr4 + 190214555 32513073 32513072 32513155 83 CTGCAACCTTCGCCTCTGGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGCGTAGCTGGGACTACAGGTGCTCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..::x.........:.x...x.xx.x........:..:x........:......x...--.:....::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 14315947 NA +3318 chr4 + 190214555 32516722 32516721 32516805 84 CCTTTGTGAACATTACCTTTGCTCCGTTTCTCCATATACTCA------TGTGTAAAATATATTCTTTTTTTTTTTTTTTTGGGGGGGGGG chr4 - 94230402 21866287 21866286 21866376 72364027 72364026 72364116 90 CCCATCTGTACATTGTTGTTGTTTGATTCAATCATATTATTAATGCATTATTTCAAATGCATTCTTTTTTTTTTTTTTTTGGGGGGGGGG ..:x.x..x.....:::x...:.:x:..:xx:.....xx.:.------.:.x.x....::.............................. 42M6I42M 60/84 71.4% 90/94230402 0.0% 6/84 7.1% 10650435 NA +3095 chr4 + 190214555 32549180 32549179 32549242 63 AGAAAAACACAAAAAACAAAATATTAAGAAAGTCATAAAATTCTATTACTC--------AGAGACATGCAT chr4 - 94230402 71514182 71514181 71514252 22716151 22716150 22716221 71 AGGAAAACACAAAAAACAAAATGTCAAAAAGGGTATAGAGTTATACCACTTATGCTGCAAAAGACATTCAT ..:...................:.:..:..:.x:...:.:..x..::...:--------.:......x... 51M8I12M 48/63 76.2% 71/94230402 0.0% 8/63 12.7% -38965002 -55265400 +3013 chr4 + 190214555 32550253 32550252 32550320 68 ATCTTATAACAGAGAAAAAAACAAAACAAAACAACAACAAAAAAATGGCCAGATTACTTGCTGGGTCT chr4 - 94230402 60994088 60994087 60994155 33236248 33236247 33236315 68 ACCTTACACTGAAAAAAAAACCAAACCAAAACAACAACAAAAATATAACTGAATTCTGGACTAGGCCT .:....:.x:::.:......x....x.................x..::.:::...x:xx:..:..:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -28443835 -65786567 +17631 chr4 + 190214555 32601941 32601940 32602264 324 TGGAAATTAGATGTTTTAGATGCACTGTTCTCAGATGCCAGGATGGATGACAGTATGAGATATAATCCTTTCCTGTGTAATGCAACCTAAACCAATCTACGTTCTAGAAGTCATTTGATTTCTCCCCT-CTCTAGTGCTATCACATAGCAACTGACTCTCCGGGGACTCCATTCATGCTGAGATTGCACTAGCTAGTGATTACACTACTGAATCAGTCTGTAATCAATCTTGCATCCTACTGATCTTTTTTGGAATTTTTCTTTTGGTCACCAACTAATGGGAAACACAGCATGGTAAAGAATAATATAGTTTC-ATCTAATTGTA chr4 - 94230402 20828331 20828330 20828656 73401747 73401746 73402072 326 TGAAAATGAAGTGTTTTTATAAACCTACTTTTGGATCCTAGGAATAATGGCAATCTGAGATACAATCCTTTCCTGTGTAATGCAACCCTAACCAATTTACTTTCCAAAAGTAGTTTGATTTTTCCCTTACAGTAGTGCTATCAGATAGCAGTGTGCTCTCTGAGGACTCCATTCATGCTGAGGTTGCACCAAACATTGATTGTACTGCTGAATCAGTCTGTAATCAATCTTGTATCCTACAGATCTCCTTCAGTACTTTTTCTTTGATCACTGTCTAATGGGAAACATAATATGTTAAAGAATAAGGAAGTGTCAATCTAATTGCA ..:....x.::......x:xx:xx..::.:.::...x.:....xx:...:..:.x.......:........................:x.......:...x...:.:....x:........:....:.-.xx...........x......::xx:.....:.:...................:......:.:x:.x.....::...:.........................:.......x.....::..::.x.:....::....:....::x.............:.::...x..........x:x...x..-.........:. 128M1I185M1I11M 247/324 76.2% 326/94230402 0.0% 2/324 0.6% 11773610 NA +3096 chr4 + 190214555 32661525 32661524 32661572 48 AGGAAAAAAAAAAAACCAACCTTTTTTTTTTTTTTTTGAGAAATAGCT chr4 - 94230402 39361057 39361056 39361104 54869299 54869298 54869346 48 AAAAAAAAAAAAAAACCAACCTTTTTTTTTCTTTTTTTGTAATTTGCT .::...........................:......x:x..x.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -6699532 -87530870 +3036 chr4 + 190214555 32671088 32671087 32671133 46 AAAAAAAAACAAAAAACAAAAAACAAAAAACAAACAAAAACATAAT chr4 - 94230402 51856538 51856537 51856583 42373820 42373819 42373865 46 AAAAAAGAAAAAAAAACAACAAACACAAAGCATACAAAAACACAAT ......:..x.........x.....x...:..x.........:... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -19185450 -75044952 +3487 chr4 + 190214555 32681667 32681666 32681739 73 CTGCAACCTCTGCCTCCTGAGTTCAAGTGATTCTCATGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:...:.........x...x..x.x.....:..::::.........:......x.::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 14484541 NA +3051 chr4 + 190214555 32685378 32685377 32685476 99 CTAGAGCAA--TGAATAAAGCTGATATTTGGAGAGAAACACAGACAAAAAAAACAAAAACAAAAAACAAAAAAACAAAAAAAAAAAACTCTACAACAAACC chr4 - 94230402 14334256 14334255 14334356 79896047 79896046 79896147 101 CCAGAACAAAGGGAATAGAGTTAATTATTGGAAGAACTCACAACCATGGAATGGTTGAATGAAAAGCCAAAAAAAAAAAAAAAAAAACCAACCAACCAACC .:...:...--x.....:..:.:..xx.....:::.xx....:x..x::..x:xxx:..::....:.x......x.............:xxx....x.... 9M2I90M 65/99 65.7% 101/94230402 0.0% 2/99 2.0% 18351122 NA +3068 chr4 + 190214555 32685417 32685416 32685487 71 AGACAAAAAAAACAAAAACAAAAAACAAAAAAACAAAAAAAAAAAACTCTACAACAAACCTCTACATGTAC chr4 - 94230402 79171643 79171642 79171713 15058690 15058689 15058760 71 AGGAAAAAAAAAAAAGAACAAAACACAACAAAACATGAAAAGAAAAATCCAGTTCACCCTTATATATGTGC ..:x........x..:.......x....x......x:....:....x..:.xxx..xx.:.x..:....:. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -46486226 -47744176 +20031 chr4 + 190214555 32702774 32702773 32703217 444 TTTTTTCCTTATTTTTGACTTCTTTGTGACTTGGCTCAAGTTAACCTTTGCAACTTGTTCAATGAGAAACTCCAGTGAACTGTGTCACCATACACAATTAATGGTTGAATGGTCTATAATAAATGAAAATGCCACCACTGCTTAGCAATTAGCTTATGGATTATCTCCAACCACTTAGAAACTCTTCCATCTGCAGCATTTAAACATGCTGAGTGATTTAAA-TATACTTAAAGTGAGCAGCAATATTCAATTACT-CGTTGGTTCATTGTGTGGAATTGTCATCATTATGATTAATAGCCCTTATAAAAAACAATTAATTTGGTATCTTGTTGCTAGGTCAACTATAAAAGCTAATTCTCTTAAGAGAAAATTA-GTTTATCAGTACATACCCTTTTATAATGTTTTGATCTAAAATATTAATGTGATCTCTT--TTTTAAAAAAGTT chr4 - 94230402 20842260 20842259 20842699 73387704 73387703 73388143 440 TTTTCAGTTTGTTTTTTTTTTCTTTTCAATTCAAATCCAGTTAACCTTTGTAACTTGTTCAGCGAGAAACTCCAACGAACTGTATCATCACACACAATTAATGGTTGAGCAGCCTAT-ATAAATGAAAATGCCATTGTGGTTTAGCAATTAGTGCATGG---ATCTTAAAAAACTTACACTCTTCTCTGTCTGCAGCATTTATCTTTGCTCTGTGATTTAAACTATATTCAAAGTGAATGGCAATGCTCAATTACTGTAGTACTGTGTTATGGGAAATTGTCACAATTTTGATTAATAGCCCTTATGGAAAA-AATTAATTTCATGTCCTGTTGCTAGGTCAAGTATAAAAGCTAATTTCTGGAAGAAAGAAATATGTTTATCAGAGTAT---CTTTTTTGATGTTTTAATCTGTAACACTAA-GCGCTCCATTCACTGTAAAAAAGTT ....:xx:..:.....xx:......x::.:.:::x..x............:..........::...........::.......:...:..:.................:::.:....-................::::x.:...........:x:....---....:x..xx.....x.xx..::..::.............xx:x....xx..........-....:.:.......:::.....::.........-::x.:x.x::..:..x.:........:x...x.................::....-.........x:.:..:..............x..............:::xx....:.:..x..-.........x::..---.....x.:.......:....:x..:.:...-.:.x..:x..--:.x.......... 117M1D41M3D60M1I33M1I55M1D62M1I14M3D30M1D10M2I13M 328/435 75.4% 440/94230402 0.0% 14/435 3.2% 11860514 NA +3154 chr4 + 190214555 32710852 32710851 32710897 46 AAAAGAAAAAAAAAAGGAAATAAGCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 32068326 32068325 32068371 62162032 62162031 62162077 46 AGAAAAAAAAAAAAAGAAAATACGCTTCTTTTCTTTCTTTTTCTTT .:..:...........:.....x....:....:...:.....:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 642526 NA +3339 chr4 + 190214555 32719057 32719056 32719134 78 ATATATATATGTGTGTGTGTATATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGT chr4 - 94230402 81401293 81401292 81401370 12829033 12829032 12829110 78 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGT ....x.x.:...x.....x..x.x......:::.:x.x...:..:..x.............x..:.x::...:x.... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -48682236 -45548166 +3115 chr4 + 190214555 32719059 32719058 32719139 81 ATATATATGTGTGTGTGTATATATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTGTA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x....:.:::.:x.x:..:..:.:x........:....x....x:....:x:...::. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -48682234 -45548168 +3753 chr4 + 190214555 32719127 32719126 32719204 78 ATATATGTGTGTATATATGTA-------TACATATGTGTGTATATATGTATACATATGTGTGTATATGTGTGTGTATATATATAT chr4 - 94230402 70982597 70982596 70982681 23247722 23247721 23247806 85 ATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ......:.:.x...x:.....-------.x.x.:.......:...:...:.........x::..x.........:...:.:.:.. 21M7I57M 59/78 75.6% 85/94230402 0.0% 7/78 9.0% -38263470 -55966932 +3213 chr4 + 190214555 32719156 32719155 32719327 172 TGTGTATATATGTATACATATGTGTGTATATGTGTGTGTATATATATATAACACACACA-------TGTTATATATAT--------------ATACACACACACATGTATATATATATGA---TGGAATACTGCTCAGCCAAAAAAGGAATGAATTATAT--ATATGATATATATATGATATATATGAGATATATATA chr4 - 94230402 48089497 48089496 48089691 46140712 46140711 46140906 195 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAAACTGTACCACTGTGAGAGACTAGATA--CAAAAAGAGAACAGAGCACAGCAGCTTGATTTGT-TATGAGAAAAATAAAAAGTATATA ...:x:.x.:.:......::.........:..x.x....:.:........x:.....x.-------...x.:..x...--------------..:......:.:x....x.xx.:..:x.---..::.x...:xx:.--......::...:::.x:.:.x--::x....x.:.-.....x.x.x..:.:.x:...... 59M7I12M14I28M3I14M2D21M2I11M1D24M 112/169 66.3% 195/94230402 0.0% 29/169 17.2% -15370341 -78860061 +3035 chr4 + 190214555 32719200 32719199 32719258 59 TATATAACACACACATGTTATATATATATACACACACACATGTATATATATATGATGGA chr4 - 94230402 26795339 26795338 26795397 67435006 67435005 67435064 59 TATATAGCGTACATACATTATACAGGCATAAACACACACACATATGTATATCTAAGGGA ......:.::...:.::.....:.x::...x.........::...:.....x.:.x... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 5923861 NA +3248 chr4 + 190214555 32742616 32742615 32742731 116 TCATAAAATACATGTGAA-AACTGCTACCCAGAGTTCCCAAAGCTTTGCCCACTAACTTGTACAAGT-----AATGCTGTTTTTTTGTTTTGTTGTGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37691251 37691250 37691369 56539034 56539033 56539152 119 TCAAATAAATCGTCTGAACAACTGATACACACAAACTACAGAACACAGCTTGCTATTTTG---AAGTTTGTGGGTGTTTTTTTTTTGTTTTGGGGTGTTTTTTTTTTTTTTTTTGCGTTCTT ...x.x..xx.:.x....-.....x...x..x.:x::x..:.:.x:x..:::...x:...---....-----::..:.x.............xx....................x:x..:.. 18M1I41M3D4M5I50M 79/113 69.9% 119/94230402 0.0% 9/113 8.0% -4948635 -89281767 +3056 chr4 + 190214555 32742689 32742688 32742737 49 TTTTTTTGTTTTGTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 24842217 24842216 24842265 69388138 69388137 69388186 49 TTGTTTTGGTTTGTTGTATTTTTTTTCCTTCTTTTTTCTTTTAATGAGA ..x.....x........:........::..:......:....xx..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 7900472 NA +3191 chr4 + 190214555 32770195 32770194 32770279 85 GACAGAGCAAGACTCCAGCTCAAAAAAAAAAAGAAAAAAAAAGAGAAAGAAAGA-------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 46924858 46924857 46924949 47305454 47305453 47305545 92 GGCAAGGTAAGATTTCTGCTTAAAAAATAACAGAATAAAAGAAAGTGAAGAAAATTGTTTGAAGAAAAATAAAAGAAAAAAAATGAGGGAAG .:..::.:....:.:.x...:......x..x....x....:.:..x:.::..:.-------......:.x.:..::...:...x:.:.:... 54M7I31M 57/85 67.1% 92/94230402 0.0% 7/85 8.2% -14154663 -80075739 +3027 chr4 + 190214555 32770213 32770212 32770285 73 CTCAAAAAAAAAAAGAAAAAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 7997248 7997247 7997320 86233083 86233082 86233155 73 CTCAGAAGAAAAAGGCAAAAAGACCAAAAAGAGAACACGGAGGCGTAGAACAAAAAACGAAGGGAAGAAAGAA ....:..:.....:.x.....:.xx.:.....:.:x.x.:.:.x:x::..x...:..x...:.:......... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 24772965 NA +3066 chr4 + 190214555 32770230 32770229 32770312 83 AAAAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAGGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .:...x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x..::..:....:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -4088064 -90142338 +3092 chr4 + 190214555 32774109 32774108 32774230 122 GAAGAGATGGAAAAATATCAAGCTTTTGTCCTACTAGTATTTAGATGTATTCCTAATGAGACAAAAAAAAAAAAAAGAAAAGAAAAAGAAAGCTTGTAAAAGAAAGAAATGTGCAAATAAAG chr4 - 94230402 58014722 58014721 58014835 36215568 36215567 36215681 114 GAACAGGTCCAAACCTATCAA--------CCTATTACTATTTCTATCTATTTCTAAGCTCACAAAAAAAAAAGTAATAAAAAAGCAAGAGGACCTTACAGAAGAATAAAAGGGAAAGAAAAG ...x..:.xx...xx......--------....:..x.....xx..x....:....xxxx............:x..x....:.:x....:::.:.xxx.:.::..x...x.x.x..:x.... 21M8D93M 76/114 66.7% 114/94230402 0.0% 8/114 7.0% -25240613 -68989789 +10617 chr4 + 190214555 32790842 32790841 32791137 296 TTTTGTTCAGCTACAAGTTCAATTCCAAACTTAACATCATTGCCCTTGCTGATGTGGCTCTGAGCCAGGGTAGGCAAGAGGCTAACAAAATTTGTCCAATTTACTCTAAGCAATTTGATTTAACTGGCAGTTGTTACCTTTGTGTCCCATCTCCAAACAGGCAGATTTAGAGCTTTGCAATATCCAGGCAGGCTGCACGCCAAGGTGTCAGCACCTCATTGTAACTGC-CTGCCCTGGCTCTTCCTACTGTAATCTCTATCAACAGCAAACAGATTAACATTTCACAGTCAAAACAC chr4 - 94230402 20863875 20863874 20864155 73366248 73366247 73366528 281 TTTTATTCACCCACAAGCTTAGC-CTTGACTGAGCACAAACCCTCTTGCTGACATGGACTTGAGCCAGGGAGCATCAGAGGCTAACCAAATTTGTCCAATTTAGGAGAAATGATTTGATTTAACTAGCAGTTGTTACCTTCCTGTTCTTTCTCTTGACAGGCAGATTTAGAGCCTTATAAAATACA--CAGGCTGGAAGCCAAG---------CATCACTG-AACTACACAGTGCTGGAT-TACCTGGTG-AAACCCTAACAAGA-CAAATAAATTAGCATTTAATAGTCAAAATGC ....:....x.:.....:.:.::-.:x:...x.:..:x.x:x.:........::...x::..........x:x::x..........x................xxxx..:::.............:..............:x...:.:x....:x:.................:..::..x..x..--.......x.x......---------.x...:..-....:.-.x.:x....x.-.x...:x..-..x.:...x...x.-....:.:....:.....x.:........::. 23M1D162M2D16M9D8M1D6M1I11M1D9M1D14M1D31M 206/280 73.6% 281/94230402 0.0% 17/280 6.1% 11926967 NA +3023 chr4 + 190214555 32791152 32791151 32791207 56 AACTCCAAGTAGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 7002310 7002309 7002365 87228038 87228037 87228093 56 AATTACCAGTAGTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATA ..:.x.x.............xx...........x.........:::x.::..::.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 25788842 NA +3087 chr4 + 190214555 32793729 32793728 32793786 58 AGAGAGACTATGTCTCAAAAAAAAAAAAAAAAAACAAAAAGAAGAAAAGAAATTAATT chr4 - 94230402 46431678 46431677 46431735 47798668 47798667 47798725 58 AAAGAGAAGATGTCACAAAAAAAAAAAAGAAAGCCAGAAGAGAGAGAAAGAAGTAATT .:.....xx.....x.............:...:x..:..:::...:..::..x..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -13637949 -80592453 +3048 chr4 + 190214555 32823672 32823671 32823765 94 CAAGCTTCACTTTTCCCTTTAGTTTAGTGATTTTGGGGGCCCAATATAATTTTCTTTCACACTTCCCCCCCTTTCCTTTTTAAAATCTTTTGGA chr4 - 94230402 39350876 39350875 39350959 54879444 54879443 54879527 84 CAAGACTCATTATTTCCTTC----------CTATGACATTCAAATACAATTTTCTTTAGTTTTTTTCCCCTTTCCCTTTTAAAAAGCTTTTGGA ....x:...:.x..:....:----------:.x..:x:x:.x....:..........x::x:..::....:..:......x....x........ 20M10D64M 58/84 69.0% 84/94230402 0.0% 10/84 11.9% -6527204 -87703198 +3263 chr4 + 190214555 32832415 32832414 32832641 227 ATGTTTTATATATAAATATATAATATATAAATATATATAAATATATATAATATATGAATAT----ATATAAATGTATATAA---TATATAATATATAAATAAATATATATTATATCTA---TAATATATAT-------TT------ATATATTATAGATATAACATATATTTATATATTATA---------TAAATATAATA-TATATTTATACATTATATATTATATATTATACATTATATATTTA-----------TATATAATTTATA chr4 - 94230402 23199559 23199558 23199828 71030575 71030574 71030844 270 ATATTTTATATATGTATACATACTATATAAATACATGAAATTATAAAGAACATATGCCTATGTCCATATAACATCATTTAACAGCACGCACTTTTTTAATGCTGATTTTCTGTATTTACTTTAAAGTAAATGACCTCATTCAGAAGATAAATGCCAAATAAAACATATAGTTGTAGA-TATAGCTCAACAGTAAACATGATAGTATTGTCTGAAATTTCACACTGTGTAATTTATGCCACGTATCTACTGTAGCTATTTATCTAATCCATA ..:..........:x...:...x..........:..:x..x....x.x..:.....xx...----......xxx:..x...---:.:::.x.x.x.x...:xxx..x.x:.:...:..---...x:..x..-------..------...x..xx:.:...x........x..:..x.-....---------....:..:...-...xx.:xx.x...x:.:.:.:.:..x.x..::::.::...:..-----------...x....::... 61M4I16M3I34M3I10M7I2M6I31M1D4M9I11M1I44M11I13M 152/226 67.3% 270/94230402 0.0% 45/226 19.9% 9632856 NA +3075 chr4 + 190214555 32861897 32861896 32861959 63 ACATATATATACACATATATACACACATATATATACACATATATATACACATATATACACATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x.......:.:..:.:x.::.x.:....x......::...:.:... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 15341148 NA +3131 chr4 + 190214555 32864512 32864511 32864571 60 ATGTGTGTGTGTGTGTGTATATATATGTACATATAAATGTATTCTATGTGCTATGTTTAT chr4 - 94230402 40224674 40224673 40224733 54005670 54005669 54005729 60 ATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGAT ..x.x...............:.....:..x...:.x....:...x..:.:x.x....x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -7360162 -86870240 +3348 chr4 + 190214555 32866922 32866921 32866965 44 CCGTCTCAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACC chr4 - 94230402 6076397 6076396 6076440 88153963 88153962 88154006 44 CCTTCTTAAAAAAAAACAACAAAAACAAACAAACAAAAAAAACC ..x...:............x.x...................... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 26790525 NA +3490 chr4 + 190214555 32866926 32866925 32866964 39 CTCAAAAAAAAACAAAACAAACAAACAAACAAAAAAAAC chr4 - 94230402 81661607 81661606 81661645 12568758 12568757 12568796 39 CTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAAC ..:.................................... 39M 38/39 97.4% 39/94230402 0.0% 0/39 0.0% -48794681 -45435721 +3057 chr4 + 190214555 32866928 32866927 32866960 33 CAAAAAAAAACAAAACAAACAAACAAACAAAAA chr4 - 94230402 70657708 70657707 70657740 23572663 23572662 23572695 33 CAAAAAAAAACAAAACAAACAAACAAACAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -37790780 -56439622 +3259 chr4 + 190214555 32866932 32866931 32867021 90 AAAAAACAAAACAAACAAACAAACAAAAAAAACCTCATGCAC--------ATTTTGGTGAGCACAGGCAAAATGCTCTGTGTTCACTGTGTGAGAATA chr4 - 94230402 56666155 56666154 56666252 37564151 37564150 37564248 98 AAAAAACAAAATAAACAAACAAACAAAAAAAAACACCTGCACAGCAAATAATAAAAATGTGCATAAATAAATACTTCAGTTTTTTTTGTTTAAAAATA ...........:....................x.x.x.....--------..xxx::..x...:.:::...xxx:..x..x..:x:...x.:.:.... 42M8I48M 64/90 71.1% 98/94230402 0.0% 8/90 8.9% -23799223 -70431179 +3012 chr4 + 190214555 32866933 32866932 32866968 36 AAAAACAAAACAAACAAACAAACAAAAAAAACCTCA chr4 - 94230402 4915776 4915775 4915811 89314592 89314591 89314627 36 AAAAACAAAACAAACAAACAAACAAAAAAAAACCCA ...............................x.:.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 27951157 NA +3756 chr4 + 190214555 32868071 32868070 32868248 178 GGGAGAGAAAGAAAGAAAAAAGTAAGAAAGAAGAAAGAAAGGAAAGAAAGAAAGAGAGAGAGGGAAAGAAGAAA-GAGAGGGAAAGAAGAAAGAGAGGGAGGGAAAAAACAAAGAAAAAAGAAAGAAAGGAAGAAGGAAGGAAGAAAGGAAGGAAGGAGAGAGAGAGAGAAAGAAAGAA chr4 - 94230402 60992646 60992645 60992821 33237582 33237581 33237757 176 GAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGT-GAGAGATGAGAGAGACAGG-ATTAGAAACTGAGACAGGCAGGGTGGGGAAAG-GAGAGACGGATAAAA .:....x....x.::.x..:.::.:.....:::.::...:x....:.:x...:..:.x.::.x::.....x.:.-x.:..:x....:.....:xxx:.x.x.x...x.::-:...:.x:...:...x...-.xx..:..xx:...x...x...:x..:..:..-......x:..x.:.. 74M1I35M1D19M1D32M1D15M 107/175 61.1% 176/94230402 0.0% 4/175 2.3% -28124575 -66105827 +4093 chr4 + 190214555 32868078 32868077 32868196 119 AAAGAAAGAAAAAAGTAAGAAAGAAGAAAGAAAGGAAAGAAAG----------AAAGAGA-------------------GAGAGGGAAAGAAGAAAGAGAGGGAAAGAAGAAAGAGAGGGAGGGAAAAAACAAAGAAAAAAGAAAGAA chr4 - 94230402 83504142 83504141 83504289 10726114 10726113 10726261 148 AATGTaaaaaaaaaaaaaaaaaaaaaaaggaaagaaaaTAATGTTTCTATAGCAAAGTGATTTAGATGTAGAAATTTTTGTAAAAAAAAAAAAAACGGGGGGAGGAGAAAAAAAAGGGGGGGGGAAACAACAAAGAAATAAAATAAAA ..x.x..:......:x..:...:..:..:.....:...x..x.----------....x..-------------------.x:.:::...:..:..x.:.:..:::....:...:..:...:......x..........x..:.x.:.. 43M10I7M19I69M 84/119 70.6% 148/94230402 0.0% 29/119 24.4% -50636064 -43594338 +3549 chr4 + 190214555 32868173 32868172 32868271 99 AAAAAACAAAGAAAAAAGAAAGAAAGGAA------------------GAA-------GGAAGGAA--GAAAGGAAGGAAGGAGAGAGAGAGAGAAAGAAAGAAAAAAGAAAAAGAGAGAAAGAAAA chr4 - 94230402 71899229 71899228 71899354 22331049 22331048 22331174 126 AAAAGAAAAAGAAAAAGGAAAAAAAACAACTTAATGTGCAACTACCCAAACTTTTTTGGTAGGACATGGAGGGAGAGATGGCGAGGAGATGAAAAAGAAAGAAAATAGAAAAAGAGGGAAAAAAAA ....:.x.........:....:...:x..------------------:..-------..x....x--.:.:...::..x..x...::::x..:............x..........:....:.... 29M18I3M7I8M2I59M 75/99 75.8% 126/94230402 0.0% 27/99 27.3% -39031056 -55199346 +3009 chr4 + 190214555 32893463 32893462 32893550 88 GGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAGATCCAATCAAACATC chr4 - 94230402 91230441 91230440 91230516 2999887 2999886 2999962 76 GGAGAGAGGAGCAAGAC------------AACCAAAAGAAAAAAAAAAAAAAAGAGCAAGCAAGCAAAAGGAAATCCACTTAAATATC ..x:.x.:......:..------------..xx....:...............:.:x:.:x...x....::.:.....x.:...:... 17M12D59M 55/76 72.4% 76/94230402 0.0% 12/76 15.8% -58336978 -35893424 +3010 chr4 + 190214555 32893480 32893479 32893537 58 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAT chr4 - 94230402 44177688 44177687 44177745 50052658 50052657 50052715 58 TCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGAT ....x..:...............:....:.:.x.....x:x..:.:..::.:.::... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% -11284208 -82946194 +3069 chr4 + 190214555 32908142 32908141 32908235 94 CCTACACCCTTCCTTTATGCCTATATGTGAAGCTTTGAGTAATATTGATGAAGGAGAAACAACATGGCCAGGGTAAAAGAGGTAGAATAAGCTT chr4 - 94230402 46695451 46695450 46695544 47534859 47534858 47534952 94 CCTTCTTCCCTCCTCTGCTCCTGTCTGTGCCCATTTGACTAAGACAGATGAAGCAGAAGGAGTATGGCATGTTTTAAAGAAGTAAACTAGACTT ...x.x:..:....:.::x...:.x....xxxx.....x...x.:x.......x....:x.::.....xx.xx.x.....:...:.x..::... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% -13787309 -80443093 +3114 chr4 + 190214555 32917773 32917772 32917891 119 GAAAGAAAAAGATTCTAGTTCCTTCTCCTTCTCTCTTTTCCTTCCTTCCTTCCTCCTTCTTTCTTTTCTTTCCTTCTTTCTTTCT----TTCTTTTTCTTTCTTTCTCTTCCTTTCTCTCTTT chr4 - 94230402 61506851 61506850 61506969 32723434 32723433 32723552 119 GGAAGAAAAAAATGCTGTGTTCCTCAC----TGCCATTTCCACACTTTCTTCCTTCATTCTTCTGTTCACGTGTTTGCTGTCTTTGGGGTTTTCTTCCATTTTTTTTCTTCATTTCTTTCCTT .:........:..x..:xx.:.:..x.----.x:.x.....x:x...:......:.x.::....x...x:x:x..:x:.x.:.:.----..:.:..:.x..:...:.....x.....:..:.. 27M4D54M4I34M 74/115 64.3% 119/94230402 0.0% 8/115 7.0% -28589078 -65641324 +3994 chr4 + 190214555 32917791 32917790 32917928 138 TTCCTTCTCCTTCTCTCTTTTCCTTCCTTCCTTCCTCCTTCTTTCTTTTCTTTCC-----TTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCT----TCCTTTCTCTCTTT-----TCTTTCTTTATTTCTTTCTTTCCTTTCTTTCTCCCCT chr4 - 94230402 92912896 92912895 92913047 1317356 1317355 1317507 152 TTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCT ....:x..:x.x......:....:...:....xx...x..:::x...:..x..::-----..::..:.:......:.....:.....:....----.:x..::x..x...-----.......::..:::.xx...x:x.x:..:...x.:.. 55M5I32M4I14M5I37M 91/138 65.9% 152/94230402 0.0% 14/138 10.1% -59995105 -34235297 +3466 chr4 + 190214555 32917855 32917854 32917963 109 TCTTTCTTTTTCTTTCTTTCTCTTCCTTTCTCTCTTTTCTTTCTTTATT-----TCTTTCTTTCCTTTCTTTCTCCCCTTCCTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTT chr4 - 94230402 81461673 81461672 81461784 12768619 12768618 12768730 112 TTCTTCCTTTTCTTTTTTTCTCCTGACTTCTCACCATGTTTCCTTCATTAAATGTCATCCATTCC--ACTTCTTGCTGTGCCTTCCCTCCCCCTTCTCTTCTTGCCCCCTTCTT .::...:........:......:.xx:.....x.:x.x:..:...:...-----..x.:.x....--x...::.x.:x.x......:...::.:.:....:..x:::.:..... 49M5I11M2D47M 71/107 66.4% 112/94230402 0.0% 7/107 6.5% -48543818 -45686584 +4751 chr4 + 190214555 32917893 32917892 32918096 204 CTTTCTTTATTTCTTTCTTTCCTTTC---TTTCTCCCCTTCCTTCCT---TCC----TTCCTTTCTTTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTT---TCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCT chr4 - 94230402 92912836 92912835 92913052 1317351 1317350 1317567 217 CTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCTGCT ..:..:...x:...:::.....x...---.xx..x.........:..---...----...:.::.x:..x:x:...:......:...:....xx..:x:....x::::..x..::xx::x..::..:.:......:.....:.....:..:---....x....x::x..:.xxxx.:.:.:..:x..:..xx:..x.x.x...:..:x:...:.x.. 26M3I18M3I3M4I94M3I63M 126/204 61.8% 217/94230402 0.0% 13/204 6.4% -59994943 -34235459 +3656 chr4 + 190214555 32917935 32917934 32918210 276 CTTCCTTCCTTTCTTTTTCTTTCTTT-----------CTTCCTTCCTTCCTTCCT----------TCCTTCCTTCCTTCCTTCCT--TTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTTTT---------CTTTCAGAATTCTTGAAGTAATTCTTTCAGAAGTTCTCCTAAGATTAGAAGTACTTTTGACCTACACATCTCAAAAAAATT chr4 - 94230402 18235167 18235166 18235461 75994942 75994941 75995236 295 CTTCTTTCTGTTTTTCTCCTTTTCTTAACAAGTTGTATTCTCTTCATTGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTCTAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTTAGGTTTCTTATTGTCATGTTCATCCTACCTTCTTGTGTGCGGTATTCCTCTGACTACAACCTCACATCTTTCTTGTTGTAACCC---CAGAATCTCACC----------AGTGTTCTGGTCTCACACTTTTAAAACAACTT ....:...:x..:..:.:....::..-----------:.::....x..x.:.x..----------.::..:x..x:.x::...x.--..x:....::...x..x.:...:.xx.......x.x:..::.xxx.......::...:.x.......x...::.:.::..xxx....:.x.:x.:x:x.:.x.::.x::.....x.x.x.xx.x...:.:.---------..:x..xxx......xx....::.---.....x:..x..----------...::.:.x.x.::....x.:.x...x..x.. 26M11I18M10I20M2I131M9I24M3D12M10D32M 160/263 60.8% 295/94230402 0.0% 45/263 17.1% 14682768 NA +3044 chr4 + 190214555 32917936 32917935 32918000 65 TTCCTTCCTTTCTTTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ....x.::.......:.....:...:..:..:.::...:::.......:x.xx..:.:.:x.... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -32297730 -61932672 +3455 chr4 + 190214555 32917947 32917946 32918037 91 CTTTTTCTTTCTTTCTTCCTTCCTTCCTT-------CCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 32546770 32546769 32546867 61683536 61683535 61683633 98 CTTTTTCTCCACTCCTTGATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT ........::x:.:...xx.x:......x-------.x.:.x.:.........:..x:...........:::x.x.:......x...::...:..:.. 29M7I62M 63/91 69.2% 98/94230402 0.0% 7/91 7.7% 371177 NA +3609 chr4 + 190214555 32917978 32917977 32918137 160 TTCCTTCCTT--CCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCT--------------------------TTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTTTTCTTTCAGA chr4 - 94230402 19053884 19053883 19054066 75176337 75176336 75176519 183 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTC--ATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTCTTCTATT-TGCCCTTCCTTCT--TTGTTTTTCAGA ..........--..:..x..xx......:x..:..:.:......xx.:...x:...:.:......:.....:.x:...--x.x:.::x...x:.xx..x...x.:..--------------------------x.x.x..x.......x...:....x..-.x::.......:.--..x.:....... 10M2I66M2D27M26I27M1D13M2D12M 109/155 70.3% 183/94230402 0.0% 33/155 21.3% 13864094 NA +3371 chr4 + 190214555 32917991 32917990 32918071 81 TCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTAT-TTCCTGTCT ...:.:x.x.:..x......:.xx.:..x...:..........:............x...x.xx..:..x.-..:..x... 71M1D9M 59/80 73.8% 80/94230402 0.0% 1/80 1.2% 13929174 NA +3098 chr4 + 190214555 32917995 32917994 32918067 73 TCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCT chr4 - 94230402 18988817 18988816 18988889 75241514 75241513 75241586 73 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTT ...:..x.x.:..x......:.xx.::.x...:..........::.:.........x...x.xx..:..x.:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 13929178 NA +3925 chr4 + 190214555 32917999 32917998 32918227 229 TTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTT--TCTTTCTTTTCTTTT----CCTTTCCTTTCTT------TTCTTCCTTTTTCTTTTCTTTTC------------TTCCTTTTTCTTTTCTTTCAGAATTCTTGAAGTAATTCTTTCAGAAGTTCTCCTAAGATT-----AGAAGTACTTTT----GACCTACACATCT-------CAAAAAAAT-------TGATCTCTTTAAATAGCT chr4 - 94230402 45185583 45185582 45185851 49044552 49044551 49044820 269 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTT-TAATCTTTTAGGTAATTC------AATATTACCTAAGGTTGTGCAAAAGAAACTTTTATGAGATCTAATTACCTGAGCCAACACAAATATACACCAGTGATCTCTGTGAAGTGCT ..x..x..:x:....::....::.xx.:::xx:.....x:...x..........::....x..:..--:.......:.:.:..----:...:.......:------.x....::x:.x...x.....::------------.::...x.........:.:-x...::..x.:.......------..xx.:x......:..-----.:.::x......----..:...xx:.:..-------..x...x..-------........x.:..xx... 66M2I15M4I13M6I23M12I19M1D18M6D16M5I12M4I13M7I9M7I18M 152/222 68.5% 269/94230402 0.0% 54/222 24.3% -12267584 -81962818 +3286 chr4 + 190214555 32918017 32918016 32918087 71 CTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCT chr4 - 94230402 8141247 8141246 8141317 86089086 86089085 86089156 71 CCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCT .:...x..x...:........x...x...:::..x......:...:...:.::..x:x.....:.::.:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 24776770 NA +3422 chr4 + 190214555 32918028 32918027 32918134 107 TTTCTTTCTTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTT----TCTTTTCTTTC chr4 - 94230402 84765849 84765848 84765959 9464444 9464443 9464554 111 TTTTCTTCTTTTGCATCCTCTTGTTTAGTTTCGTCTTTGCCTTTGGCTCCTTTCTTCCCTTTTGTTGCTGCCTTTTTGTCTTCCTTTTTATCGTTTGCTGCCTTTTCTTTC ...::.......x.x.:..:.:x..:xx..::x.....x::.:.xx::::..:...:.....:x..x..x.......x.:...:...:.x:.x...----:.......... 96M4I11M 69/107 64.5% 111/94230402 0.0% 4/107 3.7% -51847821 -42382581 +3513 chr4 + 190214555 32918054 32918053 32918142 89 TTTTCTTTCTTTCTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTTTTCTTTCAGAATTCT chr4 - 94230402 38776927 38776926 38777015 55453388 55453387 55453476 89 TTTTTTTAGCTTATTTCTCTTCCTTTTCCTTACTTATTTATCTTCCTTTTCCTCCTCTTTTCTGATTCTCTCTACCTTGCAAGCATCCT ....:..xx:..x.....:...:...:.:..x...x:..x..........:..::........xx:.:.:...x:::.x:x..x..:.. 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% -5858873 -88371529 +3236 chr4 + 190214555 32918074 32918073 32918127 54 TCTTTTCCTTTCCTTTCTTTTCTTCCTTTTTCTTTTCTTTTCTTCCTTTTTCTT chr4 - 94230402 3338200 3338199 3338253 90892150 90892149 90892203 54 TTTTTTCCTTTGCTATCTTTGCTTCCTGCTTCTTTTCTTTCCTTTCTTGCTTTT .:.........x..x.....x......x:...........:...:...x:.:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 29579874 NA +11769 chr4 + 190214555 32919950 32919949 32920321 372 AAAAAATAATAATAATAAATAA-ATA----AATAAATAATAAATAAAATAAAAAACACACCAAAAAAAACCCATAATATTCAAAGCTAAGAAAAAAAATATAAAAAGAAATGTACTTGAGGAATGCACTTGGACTCTCATCTTATCCAAATGAGATAAATGCTTAGATCTCATTGTGTTTGAAAAGACATACAAAATCAATTTCCTTAGTGATAAAAATAAATGTATTCCTAATCTACAAGTAATTGACATTCAGTGGTTAGAATTTAATTGCAATGCTTATTTA-AGTAACCAATTTTAATGAAGGCAAAGGGTCATTTTTAGTAATCTTGAATTAAAAGAATAAATAAGACAGTAAATTAATGCTTTGAGTTTTCA chr4 - 94230402 20888218 20888217 20888570 73341833 73341832 73342185 353 AAGGAATAATCACAATAAATAATATATTAGAATAATTACTACATGAAATATATAATACAT-------AATCAGCAAT-TATGAAGCTAGAGTGATAAAGATAAACTG----------------TGTAGTCAAATCCTCATATGTTTTAAATGAGATAAAAGTTGAAATTTTACTGGGTTGGATCAGAGGTACAGGATCATTTAAATT-GTGGTTTAAATAATTTCATTCTTGATGTAGAAGTAGTTAATACTCAGGGGTTAGACTTTTATTCTAAAGATTATTTAGAGAAGTCATTTGTAATGAAGACAAAAGGACATTTTTAGTAATCTTTAATTCAAGGAATAAATGAGACAATAAATGGATGCCTGCAGTTTGCA ..::......x.:.........-...----.....x..x..x..:.....x.x..:...:-------..:.x::...-.x::......:::x:.x...x.....xx.----------------..:.x.:::.::.....x.xx.::............x.:.x.:..:.:.:..x...x..xx...x:....::....x..xxx..-...:.xx......x.x:....:.:..x..x.....:..:.:.:....x.......x...x...x:..x.x.......-..x.::..x..x........:....:..x................x....x..:........:.....:.....x:....:.xx.....x.. 22M1I3M4I30M7D10M1D29M16D84M1D77M1I92M 248/347 71.5% 353/94230402 0.0% 31/347 8.9% 12031732 NA +3415 chr4 + 190214555 32949206 32949205 32949271 66 TGTGTATATATATATATGTA--TATATATATATATATATATACACACACACATATACATATATATACA chr4 - 94230402 24136194 24136193 24136261 70094142 70094141 70094209 68 TGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA ....:........x....x.--.:.x......:.....:.....x...x...x.:...:....x.... 20M2I46M 53/66 80.3% 68/94230402 0.0% 2/66 3.0% 8813012 NA +3023 chr4 + 190214555 32949230 32949229 32949300 71 TATATATATATATATACACACACACATATACATATATATACATGTATATACACATATATATACATATATGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..::.............x..........x.x.::...:..:.::x:::..:.:x.:..:.:... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -38680905 -55549497 +3192 chr4 + 190214555 32949230 32949229 32949300 71 TATATATATATATATACACACACACATATACATATATATACATGTATATACACATATATATACATATATGT chr4 - 94230402 50941868 50941867 50941935 43288468 43288467 43288535 68 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATAT---TTTGAATACATACGTAT ..x..x.x.......:....x.........:::..x..............:---.x.:x.......::.:. 51M3D17M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% -17992638 -76237764 +3052 chr4 + 190214555 32966330 32966329 32966385 56 ACTCACACACACACACACACACACACACACACATATATATATATATATATATATCT chr4 - 94230402 87372742 87372741 87372797 6857606 6857605 6857661 56 ATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT .:.:x..x...........x.........:x:...::...:..::.......x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -54406412 -39823990 +3069 chr4 + 190214555 32966337 32966336 32966385 49 CACACACACACACACACACACACACATATATATATATATATATATATCT chr4 - 94230402 87372747 87372746 87372795 6857608 6857607 6857656 49 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT ..x...........x.........:x....::...:..::.......:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -54406410 -39823992 +5722 chr4 + 190214555 32992064 32992063 32992314 251 TTACAAAATGCTGTTCCTCTTACCTGCTACAAGTGATTAAGAGT----------------------------AAAATATA--AGTATTCATCAGGGAATTCTAAGCACTGTAAATTTTTCTGGCCTCATGGTGTGTTAAAGATTTTTCTCTATATAA--------TTCTGTTTACTAACTCTTTGCACGTTGCTTATGCAGTGTGGATGCTGAAGAGT--TGTGACCCTACAGCCAGAAAATAATACATACAATAAACATT-TACATTCTCTACCTTAAATATTTA--TAAAAT chr4 - 94230402 20912089 20912088 20912380 73318023 73318022 73318314 292 TTGTAAAATACTTTTTCATTCACCTGCTGTGA-TGAACAAAAATCCCAGTCTACCAGACGTATTAGTATTCCAAAATGTATCAGTATTAACAGAGGAATTCTACATACTGTGAACTTCATGAGCCTCATGGTGTGATAAAGATTTGTTTTCCTTTAATTTAATGGTTCTATTTCCTAAATATTTGCATAATTCTTATGCATTTTGGATTATGAAAAATGAGATAATTTGGAAGATA-AAAATAATGCAGGCGTTCAACTCTATATTTTTCTTTATTTACATATTCAATTAAAAT ..::.....:..x..:.x:.:.......:::.-...x:..:.:.----------------------------.....:..--......x.:x::.........x::.....:..:..:x:x:.............x.........x.:.::x.x...--------....:...x....x.x......::x.x........x.x.....xx....:.:.--x:.:.:::x:x..x:.-........:..x:.:x.x...x:.-..:x..:::.xx:...x.....:.--...... 32M1D11M28I8M2I75M8I53M2I16M1D24M1I24M2I6M 168/249 67.5% 292/94230402 0.0% 45/249 18.1% 12079975 NA +19647 chr4 + 190214555 32994276 32994275 32994642 367 TTTTCAGTGCTGGAATTGCATTTTATATCTGGTTTGGAACCCAGTTCTTGAGAGCTGAACATAATCATCCTTAATCTGTTTGGTTACTTACTTATTACTTTA-AAGAGTGGGGAGAAAGGGACTTCTATTGAGTTTGCTCTCCAATCCATGCCTCTTTAAAGAGTGCAGGTGAATAATCTATATTTCAAAGAAAGATGACCTTTACTTGATTTAA-TGGAATCTCACTTTCAATATCTGAAATGAGAAAGTGATTAAAGCTTTGGCTGATAGGCAAGATGTATTTTAGAAATAGATAAGCAAAAAAGTCAGACACTGTCAGA--AAGGATTTTGACTTTCTTTAATATTTAAGTAC-TTCATATGAATCCTG chr4 - 94230402 20914060 20914059 20914428 73315975 73315974 73316343 369 TTTTTTATAGCGGAATTGCGTGTCATTTTTGGGCTGGAACTTAGTGTCTGGGAGTTCTACATAATTGTGTTTAAACC-TTTCACTGCTTACTCAGTATTTTGTCAGTGAGGAGAGAGAGCTGTTTCTCTTGAGTTTATTCTCTAGTCTTTACTTCTTCAAAATGTGCAGATGAGTAATCTATATTTCAAAGAAAGATGACCTTTACTGGATTTAAATGGAATTTTTCTTTCAATATCTGAAATGAGAAAGTGATTAAAGTTTTGGTTGATAGGTAAGATGTATTTTAGGAGCAGATAAGCTTAAAGGTCAGACACTGTCAAATGAAGGATTTTGACTT--TTTAATATTTAAATACTTTCATAAGAATCATG ....:x:.:x:........:.x.:..x.:...x:......::...x::..:...:.xx.......::.x:....x.:-...x::.:......:.x..:...:-x..x.x..:....:..xx::....x........::....:.:..:x.:.:....:...:x......:...:.................................x.......-......:.:x.................................:.....:.......:..............:.::........xx...:..............:.--..............--............:...-......x.....x.. 77M1D24M1I112M1I106M2I14M2D16M1I15M 288/364 79.1% 369/94230402 0.0% 8/364 2.2% 12080216 NA +3694 chr4 + 190214555 33045169 33045168 33045240 72 CATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398802 33398801 33398873 60831530 60831529 60831601 72 CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ......x..:...x..x.x:.:.:::.:.:.:....:.:.......:.x.............x.....x... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% -353633 -93876769 +3506 chr4 + 190214555 33045170 33045169 33045238 69 ATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398805 33398804 33398873 60831530 60831529 60831598 69 ATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...x..:...x..x.x:.:.:::.:.:.:....:.:.......:.:.............x.....x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% -353635 -93876767 +3500 chr4 + 190214555 33045172 33045171 33045242 71 ATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x..:...x..x.x:.:.:::.:.:.:....:.:.......x.x.............x.....x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -353631 -93876771 +3075 chr4 + 190214555 33053782 33053781 33053845 64 TTGCCACCACTTTCCCTTCC--AAAAAAAAAGAAGAAAAAAAAGAAACAAAACACATTGAAAAATA chr4 - 94230402 59404620 59404619 59404685 34825718 34825717 34825783 66 TTGCCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAAATA .....x..x::::...::..--.........:..:..:.......x......::..x.:.:..... 20M2I44M 47/64 73.4% 66/94230402 0.0% 2/64 3.1% -26350838 -67879564 +10559 chr4 + 190214555 33084251 33084250 33084618 368 TTAGGATTCTT--AGATTTTATAAACAGTTTTCCCCTGCAGTGCCTCTAGAAAATGTGTCTTGAAAGATTTCCATAGCCCTGCA-CATTCAAGGTCTCATGTAACTGACAAGATAATGACAGGGGCAATTTTAAACTGTTAAAAGACTTTGCTGCATTTGATCTTTTCCAGTGCCAATTTCAGCAAAAGA--GGGGGAAATGTTCATTACGTCA--AAAGGAACGTAAAATACAAAATATGATGCCAGTTTCTGAGACTTTTCCATCCAAATAT--TCTTCTACCAAATGACAGGGATATGTCAAAAATATAGTCAAGGAAAAAAAAGTA----TATGTTGGTTGATCTCAAAC------TAAGAAAGTT-GTTACTGTTAACAAGCT chr4 - 94230402 20929851 20929850 20930220 73300183 73300182 73300552 370 TTAAAATTCTTGCAGGTTTTACAAATACTCTGCCACT---------CTACCAAAATCTTCTTGAAAGATTTTCCTAGTC-TGCATCATTCAAGGTCTGATACGACTGACAAGATAATGTCAGGAGCAATTTTAATCCATT-AAAGACCTTGCTTTATTAGATCCTGGTCTGTGCTGACTGTGGCAGAAACTTTTAAAAGATGTTCATTATGCCAGGGAAAAAATGTTAAACAGAAAACATGATGCCAGTTTCTTAA------CCTTCAAAGTATAACCTTCTCTAAAATGAGAGAAACATGTC-AAATTATGAGAAGAGAAAAAGTAATAAAACCATGTCAGTAGATCAGAAATAAGGTGTAAAAAAGTCAGATTTTTTTAATTAGCT ...::......--..:.....:...:.x.:.x..x..---------...xx...xx:x.............:.x...:.-....-............x..:::...............x....:..........x.::..-......:.....x:...x....:.xx:.x....::.:.x::...:..:x--xx:::.:..........:.:..--:..::..:..x...:.x....:...............x.:------..x..x..:...--:.....x:x......x..::.:.....-...x...::xx.::......:x.:..----:....::..x....xx...:------...:.....:-.x.x:.x....:x.... 11M2I24M9D33M1D4M1I55M1D49M2I22M2I40M6D12M2I27M1D26M4I20M6I10M1I17M 251/350 71.7% 370/94230402 0.0% 38/350 10.9% 12154400 NA +3297 chr4 + 190214555 33098173 33098172 33098263 91 TGGCATGATCTTGGCGCACTGCAACTTCCACCTCCAGGGCTCAAGTGATTCTCCTACCTCAGCCTCCTGAGTAGCTAGAATTACAGGTGCA chr4 - 94230402 18197114 18197113 18197198 76033205 76033204 76033289 85 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ......x..x..------..:..:.::xx.x..:.x...:.......x...x.xx:x........::::.......:...:....x..... 12M6D73M 60/85 70.6% 85/94230402 0.0% 6/85 7.1% 14901059 NA +3155 chr4 + 190214555 33101562 33101561 33101661 100 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTCTTTCTTCTTTCTTGTCTTTTTT chr4 - 94230402 15266896 15266895 15266995 78963408 78963407 78963507 100 CTTTCCCACCCCCCTTCTCATTTTCAGGCTTTATTTCCTTAACCTTTGATTTCAGTCTTACTTTTTCTACATTTTTCTTAACTTTTTTCTTTTCTTTTTT .....::x.:::.:....:x:....xxx....x....:..xx::::.xx....xx....x....:...x:x...:.::.xx...:......x........ 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 17834666 NA +3989 chr4 + 190214555 33101607 33101606 33101753 147 CTTCTTTCTTTCTTTCTTTCTCTCT--------CTTTCTTCTTTCTTCTTTCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTT-----CCTTCCTTTTCTCTTTT----CTTATC----TTTTTCTTTCTTTTCTTCTTTTTTTTCTTTCTTTCTTCCCTTCCTTCTT chr4 - 94230402 45185582 45185581 45185749 49044654 49044653 49044821 168 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTT ...x..x..:x:....::...::..--------:.....x...:x.........x.....:x.:....x.....:..:.:.:.-----:.....:......x:..----...x..----:..x.......xx:.x:.::.xx.:....x:.:.:...:...:xx.... 25M8I50M5I17M4I6M4I49M 100/147 68.0% 168/94230402 0.0% 21/147 14.3% -12083975 -82146427 +4404 chr4 + 190214555 33101638 33101637 33101862 225 TCTTTCTTCTT------TCTTGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCTTATCTTTTTCTTTCTTTTCTTCTTTTTTTTCTTTCTTTCTTCCCTTCCTTCTTGTTTGGTTGCTTTTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCATCCCTCCCTCCTTCCTTCTTTTTTCCTTCC--TTCCTTCCTTTTTCCTTCCTTCCTTCCATTTCC chr4 - 94230402 34857649 34857648 34857859 59372544 59372543 59372754 211 TTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTT---TCCTTTTAT---TACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATT----------------TTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCTCCCGGTTTC .:....:....------.:.xx:....x..x.....:.:.x..x..x...---.......x.---.x....:.:....x..x..x..:.:.:....x..x...:.........::.::x.::x::.x:..::.x..x.:x..----------------::...:.::..:x:..x:.x...:.xx:x...........--..x.....::.:x.x..x...:..:..:x..:. 11M6I33M3D9M3D77M16D40M2I33M 131/203 64.5% 211/94230402 0.0% 30/203 14.8% -1756011 -92474391 +3725 chr4 + 190214555 33101652 33101651 33101782 131 TGTCTTTTTTCTTTCTCCTTTTTTTTCTTTCCTTCCTTTTCTCTTTTCTTATCTTTT--TCTTTCTTTTCTTCTTTTTTTTCTTTCTT--------TCTTCCCTTCCTTC-------TTGTTTGGTTGCTTTTTTCCTTCCTTCCTTC chr4 - 94230402 61332289 61332288 61332436 32897967 32897966 32898114 148 TGTCTTTTCTCTGTCCCCTTTTTTATCATCCAATCTTTATTTTCCTTCTTCACTTTTTGTCTTTCTTAATTTCCCTTTAATTGTTCCTAGCGTTGATTTTGTCTTCTTTCTCTGAAGTTGTTCTGTTCCATTTCCCCTTTTCTGATTC ........:...x..:........x..x.:.xx..:..x.:.:::.....xx.....--........xx:...::...xx.:x...:.--------.:..x:....:...-------.....:x...x.x...::....:::.xx... 57M2I29M8I14M7I31M 90/131 68.7% 148/94230402 0.0% 17/131 13.0% -28230637 -65999765 +3683 chr4 + 190214555 33101714 33101713 33101870 157 CTTTTCTTCTTTTTTTTCTTTCTTTCTTCCCTTCCTTCTTGTTTGGTTGCTTTTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCATCCCTCCCTCCTTCCTTCTTTTTTCCTTCCTTCCTTCCTTTTTCCTTCCTTCCTTCCATTTCCTTCCTTCC chr4 - 94230402 61324383 61324382 61324539 32905864 32905863 32906020 157 CTTCCTGTCCTTTTTTTCCTCCTTATTTCCCTTCTTTAGTATTCTGTCTCGACCTCTTCACTGCCACTGTTCCACCCCATCCAATATTCTTCCTTGAATCCTTCATCTTGTCTCCCTTCATTGTTTGTAGCTGCCTTCTCTCCCTGGCCAATCTCCC ...:::x..:........:.:...x:........:..xx.:..:x..:x.xx::.::::x.:x:.x:.x:...x:...x:..xx:..:.:...:.xxx......x.:..x:..:.....x..x:..x.xx..x.....::...x.xx..xx:..:.. 157M 90/157 57.3% 157/94230402 0.0% 0/157 0.0% -28222669 -66007733 +3023 chr4 + 190214555 33101725 33101724 33101787 63 TTTTTTCTTTCTTTCTTCCCTTCCTTCTTGTTTGGTTGCTTTTTTCCTTCCTTCCTTCCTCCC chr4 - 94230402 3592248 3592247 3592310 90638093 90638092 90638155 63 TTTTTCCTTTCTGTCTACCATTCCTTTTCCCTTAGCTGTTTCTTTCCTTTAATCTTTCCCTTC .....:......x...x..x......:.:x:..:.:..:..:.......:xx..:....:::. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 29509477 NA +3397 chr4 + 190214555 33101835 33101834 33101972 138 TCCTTTTTCCTTCCTTCCTTCCATTTCCTTCCTTCCTCCCTCCCTTCCTTCCTTCCTCCTTTCTTTCTTTCATTCTTTCTTTCTTTATCATTCTCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTTTTCT chr4 - 94230402 4165275 4165274 4165412 90064991 90064990 90065128 138 TTCATTTTCCTTCTTTTCTTCCACTTCTTCACTTATTAAATATTTTTTATCTCAACCCACATGTTTTCTTTACTGCCTTTTTAAACTTTATTTGTTTCCTTAACTTTTTTGCTCTCTTCTTCCCCTTTTTCCTTGTCT .:.x.........:..:......:...:.:x...x:.xxx.x::..::x..::xx.:.x:x.x...::..:.:.x::.:...xxx:x.:...:x:..:...xx:.....:x:.:....:::::.......:...x... 138M 78/138 56.5% 138/94230402 0.0% 0/138 0.0% 28936560 NA +4459 chr4 + 190214555 33101876 33101875 33102141 266 CCCTTCCTTCC-TTCCTCCTTTCTTTCTTTCATTCTTTCTTTCTTTATCATTC---TCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTTTTCTTATCTTTATTTTTCTTCCTTTCTTTTCTTCTTTCTCTTTCTTTTCTTCTTTCTTTTTCTTTCTTTCTTTCCTTCCTTCTTTCTTGGTTGCTTTTTTCTTTTCTTCCTTCCTTCCTTACTTCATTCCTTCC---------TTCCTCCCTCCTTCCTTTTTCCT---CCCTTCCTTCCTTTTC chr4 - 94230402 61332221 61332220 61332496 32897907 32897906 32898182 276 CTTTTACTTCCAGTACTCTTTTATTACTAAAATCCTCTTGTTCCTAATCTCTTGAATTTTGATTGCACTGTCTTTTCTCTGTCC--CCTTTTTTATCATCCAATCTTTATTTTCCTTCTTCACTTTTTGTCTTTC---TTAATTTCCCTTTAATTGTTCCTAGCGTTGATTTTGTCTTCTTTCTCTGAAGTTGTTCTGTTCCATTTCCCCTTTTCTGA-TTCATTGAAGCCTGAAAAAGATTTGTTTCTCTTTTTTTCTTCTTAGGCTCTGTAATCCTTCTC .::..x.....-x.x...:...x..x..xxx..:..:.:x...:.x...x:.:---.:..xx..x.x:.x.::...:...x...--........x.:x..:x...........:....:.:x.....:x......---..xx....:::..xx..x...:.xx:x.:xx.::.x:.........:x.xx.:.x..:.x..::x..:.::.:..:..x.-......xxxx..---------..:x.::...:..::..:...:.---.:..x:xx.....:.. 11M1I41M3I28M2D49M3D80M1D12M9I23M3I16M 162/260 62.3% 276/94230402 0.0% 22/260 8.5% -28230345 -66000057 +3672 chr4 + 190214555 33101894 33101893 33101968 75 TTTCTTTCTTTCATTCTTTCTTTCTTTATCATTCTCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTT chr4 - 94230402 56151551 56151550 56151622 38078781 38078780 38078852 72 TTTTTTTTTTCCATTTTCTCTGT---GACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTT ...:...:..:....:.:...x.---x.:x....:...x.x......:::...........:....:........ 23M3D49M 55/72 76.4% 72/94230402 0.0% 3/72 4.2% -23049657 -71180745 +3066 chr4 + 190214555 33101919 33101918 33101999 81 TTATCATTCTCTTTCTTTCTTTTTTCTTTTTCTTTCCTTCCTTTTTTCTTTTCTTATCTTTATTTTTC---TTCCTTTCTTTTC chr4 - 94230402 18898499 18898498 18898581 75331822 75331821 75331904 83 TTATCACACTCTTTCATTGTTTTTTCTTTTTCTTTTCTTTTTTTTAACTGCTGTT-TCTCCAACTGGCCGATGCCTCTCTTTTC ......:x.......x..x................:...::....xx..x:.x..-...::.x:.xx.---.x...:....... 55M1D12M3I13M 60/80 75.0% 83/94230402 0.0% 4/80 5.0% 14203420 NA +4188 chr4 + 190214555 33101947 33101946 33102122 176 TTTCTTTCCTTCCTTTTTTCTTTTCTTATCTTTATTTTTCTTCCTTTCTTTTCTTCTTTCTCTTTCTTTTCTTCTTTCTTTTTCTTTCTTTCTTTCCTTCCTTCTTTCTTGGTTGCTTTTTTCTTTTCTTCCTTCCTTCCTTACTTCATTCCTTCCTTCCTCCCTCCTTCCTTTTT chr4 - 94230402 45185586 45185585 45185750 49044653 49044652 49044817 165 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAAC------TCTTCCCT---TTCTCACTTAG-TGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTT-ATTCTTTTCTCTTTAATCTTT ..x..:x::....:.:..:..xx...:.x:...x.x:...x.:............::x.:.:.:x.:..............xx.------....:...---....:x...:.-.....:.:x..x:.:x..:...:xx..x:x.:.x..::...-x...:.::...:..xx.:... 84M6D8M3D11M1D41M1D21M 107/165 64.8% 165/94230402 0.0% 11/165 6.7% -12083639 -82146763 +3378 chr4 + 190214555 33101966 33101965 33102044 79 CTTTTCTTATCTTTATTTTTCTTCCTTT-CTTTTCTTCTTTCTCTTTCTTTTCTTCTTTCTTTTTCTTTCTTTCTTTCCT chr4 - 94230402 38776925 38776924 38777004 55453399 55453398 55453478 80 CTTTTTTTTAGCTTATTTCTCTTCCTTTTCCTTACTTATTTATCTTCCTTTTCCTCCTCTTTTCTGATTCTCTCTACCTT .....:..xxx:......:.........-.:..x...x...x....:......:..:.::...:.xx....:...x:.:. 28M1I51M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% -5674959 -88555443 +3233 chr4 + 190214555 33102009 33102008 33102073 65 TTTCTTTTCTTCTTTCTTTTTCTTTCTTTCTTTCCTTCCTTCTTTCTTGGTTGCTTTTTTCTTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ..:.x...:........:...:...:.....:::..:..:....:...x:.x...::..:x:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -32113657 -62116745 +3139 chr4 + 190214555 33102025 33102024 33102086 62 TTTTTCTTTCTTTCTTTCCTTCCTTCTTTCTTGGTTGCTTTTTTCTTTTCTTCCTTCCTTCC chr4 - 94230402 3592249 3592248 3592310 90638093 90638092 90638154 62 TTTTCCTTTCTGTCTACCATTCCTTTTCCCTTAGCTGTTTCTTTCCTTTAATCTTTCCCTTC ....:......x...x:.x......:.::...:.:..:..:....:...xx..:....:.:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 29509776 NA +3704 chr4 + 190214555 33102103 33102102 33102221 119 TTCCTCCCTCCTTCC--TTTTTCCTCCCTTCCTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTCTTTCTTTCTCTTTTTTCTTTCTAGT chr4 - 94230402 79422460 79422459 79422580 14807823 14807822 14807943 121 TTTTTCCCTCCTTTCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTTTCTCCTTTGCCATTGTTATTTGAGGCTTTCACTCTCTCTTTTCTCTCCAGT ..::.........:.--........:..:xx.x.:...x....:.xx:::..:.:x.....x....xx:..::::.::x:.x..x..x...xxxx.....x:.....:......:..:... 15M2I104M 76/119 63.9% 121/94230402 0.0% 2/119 1.7% -46320357 -47910045 +3284 chr4 + 190214555 33147638 33147637 33147708 71 ATATACTAGATACATATATTACATATTATATACATATATATACATATATATATATATATACTCAAAACATT chr4 - 94230402 56721735 56721734 56721805 37508598 37508597 37508668 71 ATGTAATACATATATGTATTAAATACTATGTAAATATGTATACTAACATATATATGTTTGATCTTAACATT ..:..x..x...:..:.....x...:...:..x....:.....xx.:........:.x.:x..xx...... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -23574097 -70656305 +3190 chr4 + 190214555 33162553 33162552 33162627 75 TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTTTTTTCTTCTTCTTTTCTTCTTCT chr4 - 94230402 27426809 27426808 27426883 66803520 66803519 66803594 75 TTTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ...:x.x.:..x:.:::..:.:x:..x..x..:..:...:................:.::....:.x...:x... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 5735744 NA +3134 chr4 + 190214555 33162554 33162553 33162633 80 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTTTTTTCTTCTTCTTTTCTTCT--TCTTCTTCT chr4 - 94230402 8439379 8439378 8439460 85790943 85790942 85791024 82 TTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTT ..::..::.x.x....x:.::::...:x:..:.:..::..::..:..........:..........xx...--......::. 71M2I9M 53/80 66.2% 82/94230402 0.0% 2/80 2.5% 24723175 NA +3029 chr4 + 190214555 33162642 33162641 33162703 62 TCTTCTTCTTTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTTTTC chr4 - 94230402 35007545 35007544 35007606 59222797 59222796 59222858 62 TCTTTTTTTTTTCTTCTTCTTTTTTTTCCCTCCATTTCCTCCTTTGCTTAGTTTACTGTTTC ....:..:.............:..:.:::..:.x.:.:..:....x...xx.:.x..x.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -1844903 -92385499 +3036 chr4 + 190214555 33163446 33163445 33163495 50 TGAAGTTTATTTTTTTGTTTCTTTGTTTGTTTGTTTTTGTTTTTTTTCCA chr4 - 94230402 20380493 20380492 20380542 73849861 73849860 73849910 50 TGAAGGTTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTA .....x.......x..x...x...........x..x.....x......:. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 12782953 NA +3058 chr4 + 190214555 33170676 33170675 33170741 66 ATTCGGGTAAAAAAAGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCACATATTTAAGTAA chr4 - 94230402 3187011 3187010 3187076 91043327 91043326 91043392 66 ATTAAGCTTAAATATATATGTGTGTGTGTGTGTGTGTCACTACATGCATTTCAAATATTAAAGGAA ...x:.x.x...x.x:.....................xxx.:::..:......x.....x...x.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 29983665 NA +3053 chr4 + 190214555 33171348 33171347 33171403 56 ACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATACAATTTGACTCT chr4 - 94230402 41477426 41477425 41477481 52752922 52752921 52752977 56 ATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGTGGTATGACTTT .:.....x.:...............:....:::.......:x.::::.x.....:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -8306078 -85924324 +3064 chr4 + 190214555 33179888 33179887 33179934 47 TATGTGTATATATATATACACACACACACACACATATATGTGTATCA chr4 - 94230402 64433220 64433219 64433266 29797137 29797136 29797183 47 TGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCA .:.............x......:......:..:.::.....:.::.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% -31253332 -62977070 +3024 chr4 + 190214555 33209569 33209568 33209614 46 CCCGCAAGAATGGCCTTTATAAAAAAAAAAAAAAAAAAGATTTTGG chr4 - 94230402 69582060 69582059 69582105 24648298 24648297 24648343 46 CTTGCAAGAATTTTCTTTAAAAGAAAAAAAAAAAAAAAGACTTTGG .::........xx:.....x..:.................:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -36372491 -57857911 +3043 chr4 + 190214555 33225352 33225351 33225405 54 TTATGTTGTTGTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAG chr4 - 94230402 81444619 81444618 81444672 12785731 12785730 12785784 54 TTTTGTTGTTATTTTGTTTGTTTCTTTTTGTTGTTGTTGTTTTTTGCAAGGGGG ..x.......:....x.......:.....x.....x..x.......x:.x..:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -48219267 -46011135 +3158 chr4 + 190214555 33249896 33249895 33249947 52 TTCTCTTTTTCTGCAAATTGCTGGATTTTGTTTGTTTGTTTGTTTGTTTGTT chr4 - 94230402 16311189 16311188 16311240 77919163 77919162 77919214 52 TTATCTTTCTGCACAATTTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTTTT ..x.....:.x::...x...:...:....x...................x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 16938707 NA +3351 chr4 + 190214555 33295015 33295014 33295097 83 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGGTGGAACTACAGGCATGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::........:.x...x.xx.x........::.......x..........--.:..::....:::. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 15097889 NA +32671 chr4 + 190214555 33296728 33296727 33297285 558 TTTAATATCTTATAAT-ATAGTATAATTTGTGGGGCCCTGAAGCATTGCATAAACCTTAATAAAGAATAGGTCTTTATAACTCGTTTCAATTGAATGCTTCTAAACAGACAAAAATGAAGAATCATTTTATGCACTGGTGGAAGCATACTTTTAAGCTGCAGTTTGGTTTAATTCCTGTCACCTTACTCATGACAGCTCTAACAAATAAAGAAACTGAGGATGGATTCATAGGGATAATTAAGCAGCGTTGATCTTAAGACAGTTGTCTTTTCAATGAAACACTGATTGCATTGTTCATAA---------CAAAACTATCTCTGCATGACAGAACTAATTAGTGACCATCTGAACTTACTTAGCC------AAACAAAAAAAGCAATTAAAACCTCCGTCATCACTGGATCTACCATTGAACAGCTGGTTATATTGATAAGCAATCCAGCAAGTTAAAGCTACTTTAGAACACAATGGAACATAATCTGCTTCCTGAGTAGTAATTAGAGAGCAATACGAGAATATGAGATTACTGTGGAGAAACTGTAATTGTGATGCAAACAACTTTTAAAA chr4 - 94230402 20945388 20945387 20945954 73284449 73284448 73285015 567 TTCAATGCCTTATAGTTCTGGAAAAACTTGGGCTGCCCTAAAGAAAGACATACACTTTAATAAAGAATATGTCTTTATGACT-GTTTCAATTGATTGCTTTTGAGCAGAGGAAAATGAGAAATCATTATGTTCATCAGTAGAAGCCTTCTTTTAAGTGGCAGTTTAGTTTAATTCATGTCACCTTACTCATGACAGCAATAACAAATAAAGAAATGGAGAATAGATTCCTAGGGATAATTAACCAGTGTTGATCTTGGGAAAGTTGTCTTTTCAATGAAACACTGATTGCATTGTTCATAATGTATTGTTCAAAACTACCTCAGCATGACAGAACTAATTAGTGACCATCTGAACTTACTTTGTCAAATGGAAACAAAAAAAG-AATTAAAAATGCCATAATTGCTGAATCTATCACTGAACAGCTGGTTAGATTGATAAGCAATACAGCAAGTAAAATCTAGTTTGGAATGTAATAGAACTTAATCTGCTTGCTAAGTAGTAATTAGAAAGGAAGAGGAGAATATGAGGTTACTGTTCTGCAGCAGTTATTATGATGCAA-----TTTTGAAA ..:...::......:.-x.:.x.x..:...x.xx.....:...x.xx:....x..:.............x........:...-...........x.....:.:.:....x:.......::.......x.:.x..:::..:.....x.x........:x.......:.........x.....................xx...............:x...:..:.....x.............x...:.........::..x........................................---------........:...x......................................x.:.------............-........x:x..:.x..::...:.....:..:..............x.............x........x...x...x...:...:::...:....x..........x..:.............:..x..x.x...........:.......xxx.x.:.x..x...:........-----....:... 16M1I65M1D218M9I55M6I12M1D177M5D8M 456/551 82.8% 567/94230402 0.0% 23/551 4.2% 12351340 NA +3213 chr4 + 190214555 33320056 33320055 33320150 95 AGTCTTTGTCTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTTTCTTTCTCTCCTTCTTTCTTTCTCTCTTTCT chr4 - 94230402 8141226 8141225 8141320 86089083 86089082 86089177 95 AGTTTTGGCATGCCCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ...:..x.:x.x::.:...:x:....x..x...:........x:.:x:.::::..x...:.:...:...:.::...x.x:.:....:..::.:.. 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% 25178830 NA +3129 chr4 + 190214555 33320067 33320066 33320143 77 TTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTTTCTTTCTCTCCTTCTTTCTTTCTC chr4 - 94230402 56151550 56151549 56151626 38078777 38078776 38078853 77 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACTC ...:...:....:x..:.:...x.xx:xx..:.:..x:x..::..:.:..:.........:...:.:......x... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -22831483 -71398919 +3280 chr4 + 190214555 33325188 33325187 33325287 100 GAGAAGAGAAGACAAAGAAGAGAAGAGAAGAGAAAAGGAGAGGAGAGGAGAAGGGGCGAGGAGAAGAGAAGGGAAGAGAAGAGAAGAGGAGAGGAGAGGA chr4 - 94230402 40465776 40465775 40465861 53764542 53764541 53764627 86 GAGAAGGGATGACAAGAATGAGAAAAG--------------GTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAA ......:..x.....::.x.....:..--------------.x....:..x.:...x:.:x:.:x.x.:.....:.::.....:.:........:..::. 27M14D59M 59/86 68.6% 86/94230402 0.0% 14/86 16.3% -7140588 -87089814 +9964 chr4 + 190214555 33349563 33349562 33349742 180 TGTAAACAGGCACCATGCCATACTAACAGATGGTTGAG--TATTCACAACCAAAAGACCATGAATGAACATCAAATGTGTTTACTGAGGGCAGGAGTTCCAAGAGCAAATGCCCAAACAGCTGTCTGTCCTTAGGTTATGAACCTAGAGTTGAAGATATCTGCCACTCCTAATTCATGTCTT chr4 - 94230402 20951945 20951944 20952126 73278277 73278276 73278458 182 TGTTAACAGACATTATGCCATTTTAACAGATGGTTGAGAGTATAGAAAACCAAAAGACCATGAATGAACATCATACGTGTTTGCTAAGAGCATAAGTCCCAGTCAGAAACACCCAAACATCTGTCTGTCCTAAGGTCATCAACCAATGGTTGAAGAGATGTGCCATCACTAATCTATTTCTT ...x.....:..::.......x:...............--...xx.x..........................x.:......:..:..:...x:...:...:xx:x...::........x...........x....:..x....x.x:........x..x.....::x.....::..x.... 38M2I142M 141/180 78.3% 182/94230402 0.0% 2/180 1.1% 12397618 NA +3026 chr4 + 190214555 33352375 33352374 33352428 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGACAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:.........x........... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -34299709 -59930693 +3084 chr4 + 190214555 33388655 33388654 33388714 60 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATTTTATAAAACCAACA chr4 - 94230402 18985539 18985538 18985598 75244805 75244804 75244864 60 AGAAATAAGAAGAAAAGGAAAACACCTACATATGTATATATATTTTTTAGAAGACAAATA .:...x..:..:....::....:.:x..:....:.........x.....x..:..x..:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 14403116 NA +3190 chr4 + 190214555 33388661 33388660 33388712 52 AAAAAAAAAAAAAAAATATATATATATATATATATATATTTTATAAAACCAA chr4 - 94230402 69437739 69437738 69437790 24792613 24792612 24792664 52 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAA .........x......x.:x...................:...:.x..x:.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -36049078 -58181324 +3077 chr4 + 190214555 33410719 33410718 33410776 58 GGAAAATGAGATTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGCCTCTAGGATGGT chr4 - 94230402 49463202 49463201 49463259 44767144 44767143 44767201 58 GGATGCTGAAACTTGTTTTTTGTTTGTTTGTTTGGTCTTATTCTGACTGTGAGATGGT ...x:x...:.:......................x.:x.x..:..x..x.::...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -16052483 -78177919 +3043 chr4 + 190214555 33439326 33439325 33439386 61 AATTGGTTTTCTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTGACGGAGTCTCGTTCTGTTC chr4 - 94230402 54645350 54645349 54645410 39584993 39584992 39585053 61 AATTGATTTTTTTTTCAATTTTTTTCTTTTTTTTTTTAACTGATGGGGAACTGTTGTATCC .....:....:.....xx...................xx:...:..:.xx::...x.:.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -21206024 -73024378 +3013 chr4 + 190214555 33440968 33440967 33441013 46 TTAGGGAAAACAGAAAAAAAAAAACAACAACAACAACAACAAAAAC chr4 - 94230402 4280801 4280800 4280846 89949557 89949556 89949602 46 TTAGACACTATGGAAAAAAAAAAACAACAACAATAACAACAAAAGC ....:x.xx.::.....................:..........:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 29160167 NA +3467 chr4 + 190214555 33440968 33440967 33441024 57 TTAGGGAAAACAGAAAAAAAAAAACAACAACAACAACAACAAAAACAAACAAAAAAA chr4 - 94230402 65284683 65284682 65284739 28945664 28945663 28945720 57 TTAGGAGAAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACAAAAAAA .....::...x.:.x...x...x.x..................x...x......... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% -31843715 -62386687 +3055 chr4 + 190214555 33440973 33440972 33441032 60 GAAAACAGAAAAAAAAAAACAACAACAACAACAACAAAAACAAACAAAAAAAACTTGTCA chr4 - 94230402 18021891 18021890 18021950 76208453 76208452 76208512 60 GAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTCA .....x:....x...x..................x.....xx.:x:...:...x.:x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 15419082 NA +3471 chr4 + 190214555 33440974 33440973 33441029 56 AAAACAGAAAAAAAA---AAACAACAACAACAACAACAAAAACAAACAAAAAAAACTTG chr4 - 94230402 38842331 38842330 38842389 55388014 55388013 55388072 59 AAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACAGACAAACAAAAAAACCTTG ......:........---..:..:.....:......x.x.:.............x.... 15M3I41M 48/56 85.7% 59/94230402 0.0% 3/56 5.4% -5401357 -88829045 +3177 chr4 + 190214555 33440979 33440978 33441038 60 AGAAAAAAAAAAACAACAACAACAACAACAAAAACAAACAAAAAAAACTTGTCACAGAGA chr4 - 94230402 75231116 75231115 75231175 18999228 18999227 18999287 60 AGAAAAAAAAAAAAAAGAACAACAACAACAAAAAACCCTAAAAAAAAGCAGGCATGGAGA .............x..x.................xxxx:........x:x.x..::.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -41790137 -52440265 +3064 chr4 + 190214555 33455814 33455813 33455858 45 TTTTTTTTTTTTTTTTTTTTTTTGAGATGCAGTCTTGCTCTATTG chr4 - 94230402 5847650 5847649 5847694 88382709 88382708 88382753 45 TTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTG ..............:.::.........x..x.........:x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 27608164 NA +3028 chr4 + 190214555 33501949 33501948 33501996 48 TACGTACATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTA chr4 - 94230402 4406424 4406423 4406471 89823932 89823931 89823979 48 TACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ......:.....xx.:.:x....................x:....:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 29095525 NA +3014 chr4 + 190214555 33501952 33501951 33501993 42 GTACATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089506 48089505 48089547 46140856 46140855 46140897 42 GTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:...:.:........:....x.x................ 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -14587554 -79642848 +3093 chr4 + 190214555 33548569 33548568 33548632 64 CCATAATATTTCCATGCTTATCACAGAAGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 86563314 86563313 86563377 7667026 7667025 7667089 64 CCATAACTCTTCTATCCTTACTTCTGAGAGTCTTTTTTTTTTTTTTTTAATTCATTTTTCATTG ......:x:...:..x....::x.x..::...................xx..:x.....:x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -53014745 -41215657 +3282 chr4 + 190214555 33555035 33555034 33555159 125 TCATGGCTCAAATGACACACACATACTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCCTCTT chr4 - 94230402 43081910 43081909 43082024 51148379 51148378 51148493 115 TCATGCTTCAAA----------ATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .....x:.....----------..:..x.::...::.:..::.:...:......x.:...:x.x.::.x:.::xx:...xxx.:...x.:...:..........:....x.xx..:::..:.::. 12M10D103M 71/115 61.7% 115/94230402 0.0% 10/115 8.7% -9526875 -84703527 +3028 chr4 + 190214555 33560690 33560689 33560816 127 TAAAAGTTATGTGAAGATAGTTGTTTTTAAGGAAATAAAAATTCCTTACATTACATACGTAACTATATGTAACTATATGTACACAATTATATGTGTATATATATATATACACACACACACATATATA chr4 - 94230402 8395741 8395740 8395862 85834541 85834540 85834662 122 TAGAATTCAAGTGGA---ATTTGTACATACAGAAG--AAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:..x.:.x...:.---.x....x:x..x:...:--........::.x:::.::.::...xx.:.:::...x:..:.:.x:...xx.:....:x..:..xx...:.:.............x.:.:. 15M3D17M2D90M 75/122 61.5% 122/94230402 0.0% 5/122 4.1% 25164949 NA +3003 chr4 + 190214555 33560750 33560749 33560808 59 AACTATATGTAACTATATGTACACAATTATATGTGTATATATATATATACACACACACA chr4 - 94230402 59708333 59708332 59708391 34522012 34522011 34522070 59 AACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ...x.x.:::.x......::.:xx....x.x............:.:............. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -26147583 -68082819 +3647 chr4 + 190214555 33560764 33560763 33560820 57 ATATGTACACAATTATATGTGTATATATATATATACACACACACACATATATATAGC chr4 - 94230402 56650830 56650829 56650886 37579517 37579516 37579573 57 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATGGC .:..x.:....::......:..:.::..x........:................:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -23090066 -71140336 +3744 chr4 + 190214555 33575584 33575583 33575654 71 TCTAGGTTTTTTTGTTTTACTTTTTGTTTTGTTTGTTTGTGTGTGTGTG------------------------TGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 28563574 28563573 28563668 65666735 65666734 65666829 95 TCTAAACTTTTTTTTTCCTCCTTTTCTTGTGTTTGTTTTTGTGTGTGTGCATGGGTGGGGGGGACATGACTTCtgtgtgtgtgtgtgtgtgtgtg ....:::......x..::x.:....x..x.........x..........------------------------...................... 49M24I22M 60/71 84.5% 95/94230402 0.0% 24/71 33.8% 5012010 NA +3034 chr4 + 190214555 33575598 33575597 33575646 49 TTTTACTTTTTGTTTTGTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804585 23804584 23804633 70425770 70425769 70425818 49 TTCTAATTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG ..:..x.....x....x...x...x........:.........::.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 9771013 NA +5943 chr4 + 190214555 33583822 33583821 33584070 249 TTGTCAAAATGTTACTGGAAATA----TTCCAGGAGTTTTAAATGAACAAACAAACAAACAATAGATATTTTTGTCACAG------TCATTCTGGTAATCAACATAAAATTCTGCTCTTGCAGAGTACAAATGGAAACTTATGAACAAAATTTATAAATAATTAATTGAATATCCTTGAGATAAACAAAAATCA-CTTTTATCAGTAATGGTCTAGGAGATG-----TATTCCAATGCTCTTTGAAGAATTATGTCAATCAGAAA chr4 - 94230402 20982990 20982989 20983247 73247156 73247155 73247413 258 TTGAAAAAATACAGCTGTAATTACAGTTTATAAAAATTTTAAA---ACAGAACAATAGTTCAT---TATTTCCTTCAAAACATCTTTCAAATTAATAATCTAGATAAA-TTTTATAGCAGCATGGGCCAGGTGGAAGTATTTGAACAGAAGTTATAAATAATTAATTGAACAACCTTGTGTTGAGCAAAAACAAGCTTCTGTCAATGAAGCTCTAAGAGATTTCATCTATGCAAATGTTCTTAAAAGGATTACAGCAACAAGAAA ...xx.....::x:...x..x..----..x:.::.:.......---...:.xx..:.:x:x..---.....::x...x.:------...xx:.::.....x.x.....-..:.::xx:x...x:.xx..::.....::x.x......:..x...................:.x.....x.x.:.:......:x.-...:.:...:.:.x.x....:.....x-----...x.x....:....x:...:....::x...:x..... 23M4I16M3D17M3D14M6I22M1D85M1I27M5I38M 163/242 67.4% 258/94230402 0.0% 23/242 9.5% 12600832 NA +3015 chr4 + 190214555 33588342 33588341 33588388 47 AGAGGGAGAGAGGGAAGAAGAAAAGGAGAGAGGGGAAAAGAAAAGAA chr4 - 94230402 5333736 5333735 5333782 88896621 88896620 88896667 47 AGAGGGGGAGAGGGGAAAAAGAAAAGAGAGAAGCAAACAGAAAAGAA ......:.......:.:..::...:......:.x:..x......... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 28254606 NA +3010 chr4 + 190214555 33609832 33609831 33609936 105 TCCTCAGCAAAGGCAAGGGAACTGAAATAATAACAATCTCTCAAACCACAGCACAATAAAATTAGAAACCAAAACAAGAAATTCACTCAAAACCATACAATTACA chr4 - 94230402 75601564 75601563 75601668 18628735 18628734 18628839 105 TCTTTTATGAAGGCAGGGAAACTATAATAAATTTAAAGCCTTCAGTAAAAACATAGCTATAGGAAGAAAAAAAAAAAAAGATTCTTTCAAATCCATACAATTACA ..:.:x:::......:..:....:x.....xxx:..xx:..:x.::x.x.:..:.::x.x.xx.::..xx....x..:.:....x:.....x............. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% -41991732 -52238670 +18085 chr4 + 190214555 33614350 33614349 33614930 581 TAAGTATCTGTATTGAAAACAAAATAATAGACAGGAAAATTCAGTAGAACTTGAAAAGCACAAATAGCAGTCATCAATGTAGTGAA-----------------TCATTGAAATCTATCCTTGACTAGTGTGAAATATGTACGAAGAGATATTGGTGTTCTTAGTTTA--CAAAAACAAATTCATATC-------CATTTCTGACTGATGTGTGGTAATATAATTTATAATAATTAATAATACAGCTAGATGTGTTCCTCTTTAAAAATTTAGTTAAAATGTGCAA----------GCCTACCGATGCTATAGAGTGCATTAGCTTTTACTGCCAGACAATACATCACAAGAAA--------ATAAGTCAACCGACTGACTTTTCAGTGCAGACAACAAAAAGCTTTTATAAACACATTAATGACGGAAATTGTGTTTTTCACTCAGTATGTACTGAAGCATAATGAAGTTAGGTCTCCAAACCAAAATATATTTTCTCTCAGGGAAAAACAATCATTTAAACAGCCATGGATTTGTTACCTAGTGCCTTGACACTTTAGGATGAGCTCCTTCAAAGCATGCTGATCTTACTTATCTGAAAATAAAT-AATGCACACAGAAAAAAAA chr4 - 94230402 20994712 20994711 20995313 73235090 73235089 73235691 602 TAAATGTTCatataataaaattaaaaataaata--aaaaatGAGCAGTATTTGAAATGTTCAGATGCAGACAACCACTGTAAAAAAAAAAAAAACACCTGTAATCAGTAAAATCCATTCCTGGGCACAAGGAACCATGAAC------ATGTTGAC-----TAGTTCAATTAGAAGTAAATTTAAAACAAAAAAACATGTTCCAC-AAGATATTGCAATA--ATTCATAATAATTAATG---TAGGCAAACTTGTTCCTGTTTAAAAATTTACTTAAACTTTAAAATCAATTCAAAGTCTTTGAGAGGTTCTGAGTGCATTAGCTTTTACAGTCAGACAATACATCACAGAAAACACAAAAGAGCAAGCAAACAACAGACTCTTTTGTGTCATCAAGAACAACCTTTTATAAACACATTAATGATGGAGATAGTATTTTCCACTCAGTATGCACTGAGGCATAACGAATTTAGGGCCCCAAACTGAAATATATTTTC-CTCTGGAAAACACAGTCATTTAAACAACCATCGATTTGTTACCTGGTATGTTTACACTTCACAATTAGTTTCTTCGGAGCCAACTCAT----TTTTTCAGATAATAAATAAATGCACAAAGGAAAGAAA ...:.:.:::...x:x...xxx..x....:.:.--....x.x..:..x.:......x.:x..:..:xx:::x.:..x....:x:..-----------------...x.:.....:..:.:..:x:.xx:x...x:...x..------..:...::-----.....:.--:.:..::.....:.x.x.-------...x.::x..-:.x:.:.x.:....--...:............:---:..x:.:.:x.......x............x.....x.x.:x..----------.:..x:x::x.x.x:x..................x.:................::...--------.xx.:x...x.:..x....:..:x...:x:x...x..x..x.....................:...:..x..:....:...........:.....:......:...x.....x.:......::............-...x..:...x...:...........:....x............:..::x..x......:.x:..x..:.:....::...xx:..x..----:..x..x..x.......-........x..:...:... 33M2D51M17I38M6D8M5D7M2I18M7I10M1D14M2D17M3D44M10I58M8I135M1D88M4D17M1I19M 397/557 71.3% 602/94230402 0.0% 69/557 12.4% 12619638 NA +3106 chr4 + 190214555 33619096 33619095 33619142 47 AATTAAAAAAAAAGAAAAAAACAAACAACAACAACAAAAAAAACAAG chr4 - 94230402 30491846 30491845 30491892 63738511 63738510 63738557 47 AGTTGTAAAAGAAGAAAAAAAAAAGCAACAACAACAAAAAAGCCAAG .:..:x....:..........x..:................:x.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 3127250 NA +3016 chr4 + 190214555 33619099 33619098 33619141 43 TAAAAAAAAAGAAAAAAACAAACAACAACAACAAAAAAAACAA chr4 - 94230402 4027219 4027218 4027261 90203142 90203141 90203184 43 TACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA ..x.......:......x................x.....x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 29591880 NA +3020 chr4 + 190214555 33619104 33619103 33619159 56 AAAAAGAAAAAAACAAACAACAACAACAAAAAAAACAAGGCAACCTAAAGTTTCAA chr4 - 94230402 34556663 34556662 34556718 59673685 59673684 59673740 56 AAAAAGAAAAAAAAAAAGAACAACAACAACAAAAGCACTTCAACTTTAGTTCTCAA .............x...x...........x....:..xxx....:.x.:x.:.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -937559 -93292843 +3001 chr4 + 190214555 33636057 33636056 33636147 91 TGACTGCATGTTTTCTGAGGCTTCCCCAGCCATGCAGTACTGTGAATAAATTAAACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 20596712 20596711 20596802 73633601 73633600 73633691 91 TGTCTAAATATTTCTTGACCTGCCTGCAGTCTTGCATCAACGAGTTTGGATCTAACACCTCTTTTTTTTTTTTTTTTTTTCCCTTCCTTTT ..x..:x..:...::...xx:x:.:x...:.x....x:.x:.x.xx.::..:x...x:..:...................:::..::.... 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 13039345 NA +3015 chr4 + 190214555 33636085 33636084 33636145 61 GCCATGCAGTACTGTGAATAAATTAAACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 31432536 31432535 31432596 62797807 62797806 62797867 61 GTCACGAGGTACTGCAGACTAATTATGCCACTTTTTTCTTCTTCTTTTATTTTATTTTTTT .:..:.x:......:::.:x.....x:..x.......:..:..:....x....x....... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 2203549 NA +3905 chr4 + 190214555 33659514 33659513 33659641 128 TGAAACCCCGGCTCTACTAAAAATACAAAAAAAAAAAAA-----------------AAATATATATATATATATATATATACACACATACATACACATACACACACACATATATAAAATAATCTGCTTCCACACTCACTCACTCA chr4 - 94230402 38338110 38338109 38338253 55892150 55892149 55892293 144 TGAATTTTTAGTTGTACTTGAAA-GCAAAAAAAAAAAAATCACAAATTCTAGTATCAAAGTTTTATGTATGTACATAAATATGTATATAGACACAAATATACAAACACACTTTTAAAATAAATTGCTTTAACAAACTCTACCTCA ....x:::::.:.x....x:...-:..............-----------------...xx.x...:...:..:...x...:::.:...x.:...x...:...x.....:x.x........x:.....:x...xx.x..xx.... 23M1D15M17I89M 88/127 69.3% 144/94230402 0.0% 18/127 14.2% -4678596 -89551806 +3680 chr4 + 190214555 33659531 33659530 33659625 95 TAAAAATACAAAAAAAAAAAAAAAATATATATATATATATATATATACACACATACATACACATACACACACACATATATAAAATAATCTGCTTC chr4 - 94230402 59708317 59708316 59708404 34521999 34521998 34522086 88 TAAAAAAACAACATAAAACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACAC-------AAAGAATCTACTTC ......x....x.x....x....x.:..x......:..xx.xx.x.x:::::...:..................-------...x.....:.... 74M7D14M 66/88 75.0% 88/94230402 0.0% 7/88 8.0% -26048786 -68181616 +3158 chr4 + 190214555 33659538 33659537 33659621 84 ACAAAAAAAAAAAAAAAATATATATATATATATATATATACACACATACATACACATACACACACA---CATATATAAAATAATCTG chr4 - 94230402 64433196 64433195 64433282 29797121 29797120 29797207 87 ACGTAGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAATTTCTG ..:x.:.....:x......x.x.x.:.:.:.........x:.........:..:.....::.:::.---...:.::.:..xxx.... 66M3I18M 57/84 67.9% 87/94230402 0.0% 3/84 3.6% -30773658 -63456744 +3443 chr4 + 190214555 33659542 33659541 33659615 74 AAAAAAAAAAAAAATATATATATATATATATATATACACACATACATACACATACACACACACATATATAAAAT chr4 - 94230402 15682753 15682752 15682826 78547577 78547576 78547650 74 AAAAAAAAAAAAGTCTTATGTGGATGAATATGTACTTACACATACATACATTTACACCCTCACAAGCATAAGAT ............:x:x...:.:x..:x....:..:x:.............:x.....x.x....x::....:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 17976789 NA +3133 chr4 + 190214555 33672224 33672223 33672309 86 TAAAATATATACAAAAATCATATATATATATATATATATATAAATATATATATATATATATATGTTAAAGTTGAGTCCATATATCA chr4 - 94230402 28944756 28944755 28944838 65285565 65285564 65285647 83 TAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGA---CATATTTCA ..:..x.x...xx..x..:x....x.:.:.:.x.........:....:.......:..x...xx.:..x:....---.....x... 74M3D9M 60/83 72.3% 83/94230402 0.0% 3/83 3.6% 4727468 NA +10707 chr4 + 190214555 33679696 33679695 33680050 355 ATATTTGACTGTACTTTTAGGAA-GAAATAGCAATTACTAATCTTACAACTCCATTGCTCGGGTGCATTCTTTCAGTAGTAAAAACAGGAACTGCAT-AATATTAAAATAATCTAGAGAATTTAGGTCAGTCAGAATAGTGCTGTACCAACACTTGTAAGAAAAGCAGCAGCAAATGGATTTTAAAAATTCAAAGATGTCTTTATACATCCACTAATAAAAGACACCAAAATGCTCTTAGTAGCAGATTTAAAGAGACTTATTGTTTGTGATGATTAAACCCAGCAGGCTTACTTGTTTTACAAACAGTATTCTGC-CATCCTGTGTGTAATTTGCATATACAGCTAATGCACTAGCT chr4 - 94230402 21000635 21000634 21000972 73229431 73229430 73229768 338 ACATTTGATTATTATCCCAGATATGAAAGACCAGAAACTAATCATTCAAGTTCACTGTTC-----TTTTTTTTTAACCATTAGAAAAGAAACTGTATTGGCATGAAAGTAATATCAAGAATGAAGGACAGTCGGAATATTTTTGTACCAACACTTGAAAAGAAA---------AATGTATTCTGATAAATCAAAGTGGCTTTCTAATACTCACTAATGAAATATGCCAAAGTGCTCTTAGTAGCAGGTTTAGAGA----TTTGCTTTATGGTGATTGAACACTACAAG--TGTTTGTTTTACAAACAGTATCTAACTCTTTTTGTGTATAGTTTCTGGAGGCACATAATACATTTGCT .:......:.:.xx.:::..:x.-....x.x..:xx.......x.x...x.:..:..:..-----:x..:...:.::x:.x.:..x..:.....:..-:::..x...:....x.x:.....xx...x.....:.....x.x:..............x..::...---------....x...:.:.x..x......xx.::..:xx.:.::.......:...x.::.....:...............:....:...----.x.xx...:..:.....:...x.x:..:.--.::..................::x:.-.x.::.....:..:...x::x.x:..xx....:..:.x... 23M1I36M5D32M1I66M9D82M4D29M2D26M1I41M 229/335 68.4% 338/94230402 0.0% 23/335 6.9% 12679061 NA +3093 chr4 + 190214555 33691590 33691589 33691679 90 ACTCCCATATATATATACATATATGTGTGTGTGTGTGTGTGTGTATGTGTATATAT--------------GTGT-ATATTTAT----ATATATGTGTATATATATATGT chr4 - 94230402 48089492 48089491 48089600 46140803 46140802 46140911 109 ACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATAT ...:.::..x:.x.:..:...:.:........:....x.x....:...:.......--------------....-.:......----...:..x..x..::.:.:..:. 56M14I4M1I8M4I22M 66/90 73.3% 109/94230402 0.0% 19/90 21.1% -14397902 -79832500 +3103 chr4 + 190214555 33691595 33691594 33691662 68 CATATATATATACATATATGTGTGTGTGTGTGTGTGTGTATGTGTATATATGTGTATATTTATATATA chr4 - 94230402 19704283 19704282 19704350 74526053 74526052 74526120 68 CATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ........::..:....x.....:...x::.........:....x..x.xx....x.x.:x..x..:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 13987312 NA +3027 chr4 + 190214555 33691596 33691595 33691647 52 ATATATATATACATATATGTGTGTGTGTGTGTGTGTGTATGTGTATATATGT chr4 - 94230402 4406423 4406422 4406474 89823929 89823928 89823980 52 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGT ...::......:.xx...:x....................x::......x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 29285173 NA +3005 chr4 + 190214555 33703495 33703494 33703555 61 CTGTCTCTCTCTCTCTCTCTCACACACACACACACACACTGGTGCCACCTTGAGAAGAAGA chr4 - 94230402 85043598 85043597 85043658 9186745 9186744 9186805 61 CTCTTTCTCTCTTCCCCTCACACACAGACACACACAGAGCAATGCCTTCTTTAGAAAAAAA ..x.:.......::.:...x......x.........x.x:::....x:...x....:..:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -51340103 -42890299 +3064 chr4 + 190214555 33707288 33707287 33707380 93 AGGTTGAAGTGA----ACCAAGATCACTCCACTGCACTCCAGCTTGGGTGACAGAGTGAAATTCTTTAAAAAAAAAAAAAAAAAAAAGAAAGAAAGA chr4 - 94230402 38607290 38607289 38607380 55623023 55623022 55623113 91 AGATTTAAGTAACAGTAACAAGAAAATCCC------CTCTAGTTTGTAGGAGTATTTGAAATTTTTTAACAAAAAAAGAAAAAGAAAAAAGGAAAGA ..:..x....:.----.x.....xx.::..------...:..:...x:x..xx:xx.......:.....x.......:.....:...:..:...... 12M4I14M6D61M 63/87 72.4% 91/94230402 0.0% 10/87 11.5% -4900002 -89330400 +3056 chr4 + 190214555 33707339 33707338 33707408 70 GTGAAATTCTTTAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGTAAAATCCGTC chr4 - 94230402 79171631 79171630 79171700 15058703 15058702 15058772 70 GTAGGATTCTTTAGGAAAAAAAAAAAAGAACAAAACACAACAAAACATGAAAAGAAAAATCCAGTTCACC ..:::........::............:..x.:..x:x..x...:x.x..........:.xx.:.:.::. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -45464292 -48766110 +3751 chr4 + 190214555 33718748 33718747 33718891 144 AGGACGGAAGGAAGGAAGGAAGGAAGGAA-----GGAAGGAAGGAAGAAAGAAAGAAAGAAAAGA--AAGAGAAGAGAGAGAAAG----------AAGAAAGAGAGAAAAAAAAGAAAGAAAGAAGGAAAGAAATAAAGAAAAGAAAAGAAAATATGCAGG chr4 - 94230402 33149002 33149001 33149162 61081241 61081240 61081401 161 AGAAGTGAGGGCTAGAAGGGAGGAAGGAACTGCTGGAAATGAAAAATAAATTAGTGCAGAATAGAGCAGGTGATGGGAAAGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAACAGAAATAAGATTAGGCAAAGGAAATCTGAGGG ..:.xx..:..xx:.....:.........-----....:x:.::..x...xx.:x:x....x...--.:.x..x.:..:..x.:.----------.:....x....:x...:x..x......:...:.x........::xx.:.x....:....x..x:.. 29M5I31M2I18M10I66M 96/144 66.7% 161/94230402 0.0% 17/144 11.8% 569746 NA +3006 chr4 + 190214555 33718767 33718766 33718836 70 AAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAGAAAGAGAAGAGAGAGAAAGAAGAAAGAGAG chr4 - 94230402 57206906 57206905 57206975 37023428 37023427 37023497 70 AATGAGGAGAGGAATAGAGAAGGAGAAAAGTAAGGAAAAGACAGTGAAGAGAGACATAAAAGATGGGAAG ..x..:.::.....x::..:.:..:.:..:x..:.......x..x.........x.x.:....x:.::.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -23488139 -70742263 +3268 chr4 + 190214555 33729989 33729988 33730072 84 TTTATAATATTATACATTATTTTATATATAAATTTATATTTAAATATTCATAATATATATTTATATATTATATATTTATATTAT chr4 - 94230402 30822494 30822493 30822577 63407826 63407825 63407909 84 TCTATGATCTTGAATATTATTCTGTATTTTCATTTGGAAGTAAATATTCAAAATATTTACATATACATATAATATTTATCTCAT .:...:..x..:x.:......:.:...x.xx....:x.xx..........x.....x..:x....:..xxx........x.:.. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 2907495 NA +3022 chr4 + 190214555 33737123 33737122 33737170 48 TATTGAAAAGTCAAAAAGAAAAAACAAAAAAAACAAAAAAACAAAAAA chr4 - 94230402 85674679 85674678 85674726 8555677 8555676 8555724 48 TGTTGAAAAGTAAAAACAAACAAACAAAACGAACAAAACAACAAAAAA .:.........x....x:..x........x:.......x......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -51937556 -42292846 +13010 chr4 + 190214555 33753574 33753573 33753888 315 TTTTGAAAGCTTGTTGTAAATGCAGAAAATAACTCCTTTACCTAGGGAGAGCTTGT-GAAGATTAATGAGTTGTTTCTTTGGGTTCAAGTTTTCCACATGCACTGGGTCCACTATGGTGATACAATTAATTTCACAACACCAGGGTTTTGTCATCCAACA-TTCTCGTACCATGCATCTATGATAAGTATTCTTTAATTAAACCTCAAAATTTGCCACTGTTGTTACCTAGTGCAGCTGGAACGTAGATATACCTCTGTGGACCACAAAGGTTTTAACATGCAGCTGGGGAAGCTTAATAATAGAATGTTTACAAGA chr4 - 94230402 21009385 21009384 21009695 73220708 73220707 73221018 311 TCTAGATAACTTGATGTGAATACAGAAG-TGATTCACCCACCACAGTACAGCTGGTTGAAGATTAATGAGTTGTTTCTTTTGGTTCAAGCATTCCACTTGTTTCAGGTATACATAAGTGGTGCAATTAATTTTACAACACTTGGGTTTTGTCATCCAGCACTTCCTATGGAATTCTGCTATGATAAGTATTCTTTAATTAAACCTTTAAAAATGTCACCAATGTTGCACACTGCAGCTGAAATACAAAAATACCTCTGAGGTCCACAATAGCTTTAGTGTTCAGTGAGGGAAG-----TATTACTATATTTTTAAGA .:.x..x.:....x...:...:.....:-.:.:..x:::...xx:.x.x....x..-.......................x........:x......x..:x:::...x:..xxx:...:.:..........:.......:x...............:..-...:::.:xx..x.xx............................:x...xx..:...::x....:.x:.x........:..:::.:.x.........x..x......x:.:....:::.x...:x:......-----..x..xx..:...x:.... 28M1D27M1I103M1I132M5D19M 223/309 72.2% 311/94230402 0.0% 8/309 2.6% 12744189 NA +3008 chr4 + 190214555 33755673 33755672 33755709 37 CTCTATCTCCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 47207638 47207637 47207674 47022729 47022728 47022765 37 CTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTT .....:x.:............................ 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% -13451965 -80778437 +3135 chr4 + 190214555 33755680 33755679 33755714 35 TCCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929913 18929912 18929947 75300456 75300455 75300490 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:................................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 14825767 NA +3035 chr4 + 190214555 33755683 33755682 33755716 34 TCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...............:.................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 14825769 NA +3102 chr4 + 190214555 33760081 33760080 33760148 68 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 9693768 9693767 9693835 84536568 84536567 84536635 68 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .....:..:..::.:.::....:..::.:x...:..x.:...x..x...:........::.:.::... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 24066313 NA +3560 chr4 + 190214555 33760090 33760089 33760211 122 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCCTTCTTTCTTTCTCTTTTCTTTCTTTTTTTCTTCATGTGTCTGGACACTGTTTTTAG chr4 - 94230402 52035621 52035620 52035742 42194661 42194660 42194782 122 TCGTTTTTTCCCTCATATTTTCTGCCTGTTGGTAGATTTCCTTTCTGTTTTTCAGTTATTTCTTTACATTTGTCTTTC-CTTTTGTTTCTTCTGTTCTTCATTCATTTGGGATTTTTTCCTAG ..x..:....::..x.x:.....x:..x.:xx.xxx:..:......x.:....-x..x.......x.x.:.x......-.....x......:.x........x::.:...:xx:.x..::... 53M1I24M1D44M 81/121 66.9% 122/94230402 0.0% 2/121 1.7% -18275531 -75954871 +3121 chr4 + 190214555 33807053 33807052 33807132 80 GCTGACACCTTGATATTGGGCTTTCCAGCTTCCAGAATTATGATTTTTTTTTTTTTTTTTTTGAGATGGAGTCACACTCT chr4 - 94230402 81882228 81882227 81882307 12348096 12348095 12348175 80 GCTTGTGCCTCAACTTACAGCTTTCTCCTTTTCAGTACTATGATTTTTTTTTTTTTTTTACTAAAATTCAGTCAAATCCT ...x:::...::.:x.xx:......:xx:..:...x.:.....................x:.:.:..xx.....x.::.. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -48075175 -46155227 +3057 chr4 + 190214555 33815719 33815718 33815792 74 TCTGTTGTTGGTTTGTCTCTATTTATAATATCTGAAGATTTTTTTTCTTTCTTTCTTCTTTTATTTTGGTAGGA chr4 - 94230402 92887617 92887616 92887690 1342713 1342712 1342786 74 TCTTTGGTTGGTTGGCTCTGATTTCTGACATTTGGGGATTATTTTCCTTTCATCCTTTCTTTCTTTTTTTAGAA ...x.x.......x.::::x....x.:.:..:..::....x....:.....x.:...::...x....xx...:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -59071898 -35158504 +6690 chr4 + 190214555 33832458 33832457 33832690 233 TTTTCCATAATTAATGAGTTGATTAATTATATGTGTACTATAAATGATG-GTGTCTGGATAATG-----ATTACTGACCCATATGCAGTTCCCAAACCACAG------------CAAACTTCGAAAA--TTCAATTACAAGGTCCAGATGCTGTATACTGCATATGTAAACTGTTTCAGGAAGGAAGATTGCATATTAATAACATAGTCT--ATGTGGGTTATCTCTGCAGCCTAGTGAATATTTTGCAGAAATA chr4 - 94230402 21034692 21034691 21034939 73195464 73195463 73195711 248 TTTTCCGTATTTAATGAGCTGACTG----TGTGTGCACTGTAAATGATCCATGGTAAAATGATGTCCAAAATACTGATCCACATAAGATGCCaaaaaaaaaaaaaaaaaaaagataaacttaaaaaaaaTTCAATTACAAGGTCCTGGTGCCATATATTATATGCATAAAGTGCTTCAGGTATGAAGGTTGTATA-TAATAACATCATCTAAACTCAGATGATATTTTCAGAATA-CGAACATTTTG-AGAAGTA ......:..x........:...:.:----.:....:...:........x-:..x:x::..:...-----.x......:...:..:x::.x..x...xx.x.:------------:......x:....--................x.:...::....:.::..:::....x..:......x.x....:...:...-.........x:...--.:x::.:.x..x.:.x...xx..-:...:......-....:.. 25M4D20M1I14M5I33M12I13M2I66M1D14M2I23M1D11M1D7M 162/226 71.7% 248/94230402 0.0% 29/226 12.8% 12797766 NA +3270 chr4 + 190214555 33847123 33847122 33847221 99 AATATCTACCCCTTTTGTTATTAATTTATGATGCAAATAGAAAGAAATTGACTAGAAGAAAGTGTAAATTTTTAGGTGTTGAATTTTTTTTTTCTTTTC chr4 - 94230402 60488205 60488204 60488303 33742100 33742099 33742198 99 AATATCTGCCCCCAGGTTCTCCAATTTATAATGAAATTAGAAAACACAATAATAGAAAAATCCGTAATTTCTCAGATTTTAATCTCTTTTTTTCCTTCC .......:....:xxxx.:x::.......:...x..x......:x.xxxx.x.....:..xx:....x..:.:..:.x..:.x:.:........:..:. 99M 64/99 64.6% 99/94230402 0.0% 0/99 0.0% -26641082 -67589320 +5593 chr4 + 190214555 33855977 33855976 33856207 231 CTGAACTGTAATCTCAATGAAATAA----ACTGATCTTTAAC-CCAAAGAAAT------GTAAAGACCATCAGTATGGGATTACATTTCCTTTA-TAATGGCTTTAATCAAG-TGTAACTATACTGCTGAGTATAACTACAATTGCATTAAATTACAATTTACTTAAGAATATTCAAGAGTCCTTAAATTTTCAAAATATAAATAAAGCCTAACTTAATATTAAAGCTAATTTTAAACAGAAAA chr4 - 94230402 21038420 21038419 21038659 73191744 73191743 73191983 240 CTAAAGTGTTAGCTGATTAGAATAATGCAACTGATCCTTAACACTAAGGAAATAGAGAAGGAGAAAAAATCAACTTGTGATTATACTTAGGCCAACAATAATTTTAATCAAGATGTAGCTGCACAGCTGAATACAGCTAAAATTGCATTAAATTAGAGTTCACTTAAAGTGTTATTAGAACTCTTGTGTTATTAAAA---AAAT-CAGTTCACAATACTATTTAGATCTATTTTAAATGTAAGA ..:..x...x.x..x.x.::.....----.......:.....-.:..:.....------.x.:.:.xx....::x..x.....:.:..xxx::.-:...:::..........-....:..::..x.....:..:.:...x...............x.:..:......::xxx.x:x...:::...:x:..x.:....---....-x..:::.xxx..x....x.::::x........::x..:. 25M4I13M1I10M6I35M1I17M1I84M3D4M1D39M 151/227 66.5% 240/94230402 0.0% 17/227 7.5% 12817557 NA +3542 chr4 + 190214555 33924134 33924133 33924215 82 CATGTCTATATATGTGTATATGTACATACCTATATATGCATTTATATATCTAATTTACACAATAGTTTAATTAGTTTAAAAG chr4 - 94230402 71390448 71390447 71390529 22839874 22839873 22839955 82 CATGTTTGTGCTTGTGAATAAGAACATACATGTATATGAATATATATATCTTATATATACCTTAGCTTTTTTTGTATAAAAG .....:.:.::x....x...x.x......x.:......x..x.........x..x..:..xx...:..xx..x..x...... 82M 60/82 73.2% 82/94230402 0.0% 0/82 0.0% -37466314 -56764088 +3623 chr4 + 190214555 33932995 33932994 33933060 66 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGACATGCAGCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:...........::x...x.xx.x........::.................--..:....x... 53M2D11M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% 15735856 NA +3236 chr4 + 190214555 33937456 33937455 33937534 79 CCTACCAGAAAAGCAAAAACAAACAAACAAACAAACAAACAAAAATCAAATCAAGACAGAATGA-----AGAAAAAAATGCCAA chr4 - 94230402 29882695 29882694 29882778 64347625 64347624 64347708 84 CCTTCCTGAAAAACAAAACAAAGCAAACACACACATACACAAAAATCAAAACAACTCAAAAATACCCCTAGAAAAAACCCCCAA ...x..x.....:.....xx..:......x...x.:.x............x...xx..:..xx.-----........x:x.... 64M5I15M 60/79 75.9% 84/94230402 0.0% 5/79 6.3% 4054761 NA +3346 chr4 + 190214555 33937464 33937463 33937537 74 AAAAGCAAAAACAAACAAACAAACAAACAAACAAAAATCAAATCAAGACAG------AATGAAGAAAAAAATGCCAAGAA chr4 - 94230402 25740688 25740687 25740767 68489636 68489635 68489715 80 AAAAGCAAAGCCAAACAAACAAAGAACCAAAAAAAAAAAAAGTCAAAACAAGTATTTAATAGAGGtaaaaatataaaaaa .........:x............x..x....x.....xx..:....:...:------...::..:x......::x..:.. 51M6I23M 56/74 75.7% 80/94230402 0.0% 6/74 8.1% 8196776 NA +7566 chr4 + 190214555 33946281 33946280 33946600 320 AATATATCCCTTCAGA---AGAATATTTGAGTTGGATAGAAACAGTTTTGACATGCACTTGAAGACTATAAATGCTGCAAATGACAGCTTTTAATCAGTGTGATAAATAGCAAAGGTCTGTAAATGGTATCAAATAATTTCTAAAAATGAAAACTAATTT-TCCACTCCCACTGCTAGCAAATTTGTCAACTACAGTTTGATAGAACCAAAACATCTGCTCTTTGAAGCTGTGTAAACTCTCTCAGTAAAATGATGCATTATTTTGTTTTCAGATATACATTCATCTCTTTCCTAATTTAGTATGTTTATGAAGTACTAAGATA chr4 - 94230402 21063669 21063668 21063975 73166428 73166427 73166734 307 AACATACCCCAGGAGACTGAGAGTGAATGACATGAATAGGAATGATTTAGC--TGCATAAAAACTTTATCAATGTAGCAAATGACAGCTTTTAATCAATTTGAAAAATTGCAGAGGTCTCCAAATTGTATAAAATATCTTCTGAAAATGACAAATAATTTGTCAGCTATGATTACTGTAGCATTTGT--AATACAGTT--GTAAAACAGGAATATCTCCTTGGTCTTATTTTCTAAA----CCTGGTAAGGTAATGCAACATCTTGTTAGCAGA-----GTTAACCTAATCTTTGATGCAGTA--TTTGTACAGTACAATAATA ..:...:...xxx...---...:.:xx...xx..:....:..:::...x.x--....:xx:..xx:...x....:x.....................:.x...x....x...:......x:....x....x.....x:....:.......x..x......-..x:..x:x.:.:..:xx:x......--.x.......--:..:...x::..:....x..:xx.xxx::.x.x....----.:::....::.:.....x:..:.....xx....-----:..x.:..xx.:::.:..x:....--...:.:x.....x.x:... 16M3I32M2D107M1I26M2D9M2D37M4D33M5D24M2D19M 203/303 67.0% 307/94230402 0.0% 21/303 6.9% 12882612 NA +3033 chr4 + 190214555 33953987 33953986 33954052 66 AATTTCCTAGGTTTTCTTTGAGGATTTTTATTTTTATTTTTTTTTATTTATTTATTTATTTATTTA chr4 - 94230402 23959356 23959355 23959421 70270982 70270981 70271047 66 AGTTTCCTAGGTTTTCTTAGGGAAAGTCCTGACTCTCTTTATTTCATTTATTCATTCATTTATTTA .:................x.:.:.xx.::xxx:.:x:...x...:.......:...:......... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 9994631 NA +3187 chr4 + 190214555 33958927 33958926 33959011 85 AGAACCAATGGTATAAAATTAATGTAATTTTCATTTTGTATATAGGGGTGTGTGTGTGTATATATATATTTCTTTTACTCTCATA chr4 - 94230402 27034793 27034792 27034876 67195527 67195526 67195610 84 AGAAATTAAAGTATAAACGTCCTGAGAATTT-ATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCTACA ....x:x.x:.......xx.xx..x:.x...-...x.:......x.x............:......:x........x..:::.:. 31M1D53M 60/84 71.4% 84/94230402 0.0% 1/84 1.2% 6924134 NA +3175 chr4 + 190214555 33978624 33978623 33978703 80 TGCCCTAACACAATAATAATTCCTATATCAAAACCTTTATTTG-CTTTGGTTAGGGTTTTTTTTTTTGTTTTTTTGTTTTT chr4 - 94230402 54772347 54772346 54772422 39457981 39457980 39458056 76 TGATCTAAGATAAAACTTGTTCC-----CAGAGGTTTTGTTGGGTTTTGGTTTGGGTTTTTTTTTTTGTTTCTTTGTTTTT ..x:....x.:..x.x.x:....-----..:.:x:...:..x.-:.......x..................:......... 23M5D15M1I37M 58/75 77.3% 76/94230402 0.0% 6/75 8.0% -20793723 -73436679 +3307 chr4 + 190214555 33981901 33981900 33981973 73 CATGCTTATTCAA--------TAATAAAATTGCTTTTTTTCTCTTTTACCCCTGTAGAGAGGTTTTCAGGGTTGGAATAAG chr4 - 94230402 11727749 11727748 11727827 82502576 82502575 82502654 79 CATATTTATTCTAACGAGATTTAACAAAATTGCTTTTTTTTTTTTTTCTCCTTGTAAAGAGGTTT--AAGGATGTGGTAAG ...::......x.--------...:...............:.:....x:..:....:........--.:..x..x::.... 13M8I44M2D14M 56/71 78.9% 79/94230402 0.0% 10/71 14.1% 22254152 NA +3147 chr4 + 190214555 34014983 34014982 34015027 45 GTGGTATTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTAAGACCC chr4 - 94230402 34925869 34925868 34925913 59304490 59304489 59304534 45 GTGGTGGTTTTCTTCTTTTTCTCTCTTTTTTTTTTTTGAAGATCC .....:x.............:.:.:............x....:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -910886 -93319516 +32901 chr4 + 190214555 34023209 34023208 34023780 572 CAACTAGAATTTTCTTAAATTC----------GCATTTTCAAGTAACATCCAATGCTAAGACATGTCTGTACCAGTTTGATCATTCCAGGACAATAGACAATATTTCAATGCCTAAGTAAAACAGATTTAATTGCTAAACAAGATTTCAAGGAACTGAAGTTCATTTTAATCACAAACAAGCTGCAAGGCAATTTTCAATTACAGCAAGCTTTTTATTTTTCTCCAGCTGTGTGTCCCTGCTGATTCCTGAAATTACATGTAAGTTGTCCCAGATTTTGAAGTGGTGTACCTACTGAGGTTTTTCTTTTGTCAGTTGATGAAGTATCTGTGATTAGAACTTAAATAAATTGGCATTTATAAGATGCATTACCCCACCCTGTATATTTTAGGACATGATGATTGAGCATGAAGGAAGTCTGAGATATCCCCCAGTGAAAAGAGTATTCCTAATTAAGCTGCTGGTGTTGCAAG-TATTCACCTCTTCCACGGGAACATCAAAAGATAATATGGGAACAAAGCCCTAGAAAAAGAAATCTGTTGGGTATTAGACAATCAGGTCAATAATGCATTGTATTTTCAAA chr4 - 94230402 21077851 21077850 21078421 73151982 73151981 73152552 571 CAATTTGGATTTTGTCAAATTTTTGTGTGTATACATGTTCAATTAGCATGAAATGTTGAAGAATGTCTGTACTGGCTTTATCATTCAAGGACAATAGACAATATTTCA----CTAAGTAAAACAGATTTAATTGCCAAACAAGATTTCAAGGAATAGAACTTCATTTTAATCACAAAGAAGCTGCAAGGCAATTTTCAATTACAGCAAGCTTTTTATTTTTATCCAGCTGTGTATCCCTGCTGATTCCTGAAATTACATGTAAATTGTCCCAGATTTTGAAGTGCTACACCTACTGAGGTTTTTCTTTTGTCAGCTGATGAAGTATCTGTGATTAGAAACTCACTAAATTGGCATTTTTAAGATTCATTACCCCACCCTGAATATTTTTGGACTAGAAGATGGAATATGAAGAAGGTTT--TGTTGTCCCAAGGGACATTATTCTTCCTAATTAGGCTGTTGGTAGTGCAAACTGCACACCTATCCTAC---AACTTCAAAAGGTAATACAGAAGCAAAGTCTTTGAGAA--GAGTCTATAGGGTATTATTGAATCAGGTCAATAACAC-TCTTGTTCTTaaa ...:.x.:.....x.:.....:----------:...x.....x..:...xx....:.:.::x..........::.:..x.......x.....................----.......................:..................:x...x.................x...........................................x...........:.............................:....................x.::..........................:.......................x:.x.x.............x......x...............x.......x....xx..x...x..::......:.:..:.--x:.xx:...x..x..x.xx.x.x..........:....:....:x.....:-.::x.....x.:.:..---...x.......:.....::.:.:.....:.:.x..:..--:.:...:.x........xxx..............::.-.:x.:..:.:... 22M10I76M4D307M2D51M1I16M3D38M2D37M1D13M 462/560 82.5% 571/94230402 0.0% 23/560 4.1% 12945358 NA +3036 chr4 + 190214555 34049131 34049130 34049197 67 GACACATCTAGACCTGCACACACACACACACACACACACACACACACACACATACACACACACACAC chr4 - 94230402 14964818 14964817 14964884 79265519 79265518 79265585 67 GACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......xx..x:::...:::::.....::::.:::.:.:...xx.........:............. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 19084313 NA +3096 chr4 + 190214555 34049145 34049144 34049218 74 TGCACACACACACACACACACACACACACACACACACATACACACACACACACACACACACAGACAGAGAAAGA chr4 - 94230402 8395801 8395800 8395874 85834529 85834528 85834602 74 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ....:.x...:::.:x:...:.:::.::.x:...:xx...................x.....:.:::.x...:. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 25653344 NA +3040 chr4 + 190214555 34049189 34049188 34049240 52 CACACACACACACACACAGACAGAGAAAGAGAAAGACAGAGAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652135 26578268 26578267 26578319 52 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA .....::...x...:...x..x:.:...:.:.....x.............:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -33602895 -60627507 +3059 chr4 + 190214555 34056275 34056274 34056343 69 TTTCATGTATTTATTTATAGATTTATTTTCATGTTGTGAAAAAAGTAAAAGAAAATGAACAGTAGAGCA chr4 - 94230402 26782453 26782452 26782520 67447883 67447882 67447950 68 TTTCAGGCAGTCACTCATAGACTTCTTTTCATCTTCTCAAAAAAGAAAAATAAAGTGAAT-GTGAAGCA .....x.:.x.:.:.:.....:..x.......x..x.x.......x....x...:....:-..::.... 60M1D8M 51/68 75.0% 68/94230402 0.0% 1/68 1.5% 7273822 NA +9367 chr4 + 190214555 34075942 34075941 34076227 286 TTTTAACTAAGTTTTTTTAAAGAATTTTACCTGCTGTTGACTCAAGATA-TTTCCTTGTTATATTCAACAACAACTAGTTAGGCTCAATAAGGTAATAGTTTGAACAACTGAGAAACTCCATATGGTGTGTTTCTTGCTGACAGCATGAATTC-TAGCTTGAGGGCTCTGATCTATTAAACCACATGTTATGATCAAAGTGGTATTCACTGGCAATCATGATGGGAATCCCTGTTTATTGAATTGCATCTTTGTGCAATATTTTCATAGGTCAAAGATAATTAAAAGA chr4 - 94230402 21086129 21086128 21086412 73143991 73143990 73144274 284 TTACAAGTAAGATTCATAGGATAATTTTTTGT-CAGCTAAGTCAGGCTAATTTTCTTTCTACATTTTGCAAGAACAACTTAGGCTCAATGAGATAATAGTTTGAGCAGTTGAG-TACCACATATGGTGTGTTTCTTGCTGTCAGCATGAATTCTTGGCTTGGAAACACTAATATATTAAACCACATGTTCTGATCAAAACAGTACTTTTCTGCAAGCACT-TTGGAATCTGTATGCATACTGTTCTAGCTCTTTGCAGACATCATATA-ATCTGAGCTAATTAAACGA ..x:..x....x..:x.x::.x......x:x.-.x.:.:.x...:.x..-...:...x:..:...:x:...x...x.x...........:..:...........:..::....-x..:x.....................x............-.:.....::::.x..:..x................x........:::...:.:x::x....x..:x-.x......:x.:.x:..xxx:..x:.x..:.x....:xxx.:x:...-:..x:..x........x.. 32M1D16M1I63M1D39M1I66M1D47M1D19M 196/282 69.5% 284/94230402 0.0% 6/282 2.1% 12989813 NA +3285 chr4 + 190214555 34076738 34076737 34076868 131 TGTACTATGATTGTCTTTTAAACACAATTTACATAAATAATTATTGTTTTAACTCTGAGTGTGATTCTCATGACAGCACTTCCTTAGAGGAGATACCATAATGGGCATAA--TTAAATCAATTATAGTTTCCT chr4 - 94230402 88629443 88629442 88629573 5600830 5600829 5600960 131 TGTCCTAGAGTCATATTCTAGAGACAATGAACCTAAATAATTTTGATTTTAACTCTAAGCAGGGTTTTCCTGACA--AATATTTTGTAAACTATAAAGTGATTTACTTGATTTTAATTTATTTATAGTGTCCT ...x...x::.::.x..:..:.x.....xx..x.........x.x:..........:..::x.:..:..x.....--.x.x::..:x.::xx...xx:.:..xx:.x.:.--....x.:.x.......x.... 75M2D33M2I21M 83/129 64.3% 131/94230402 0.0% 4/129 3.1% -54552705 -39677697 +3021 chr4 + 190214555 34102832 34102831 34102883 52 ATATTTTTTTTTCCTTTTCTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACT chr4 - 94230402 84182665 84182664 84182716 10047687 10047686 10047738 52 ATATATTTTTTACCTTTTCTTCTTTTTTTTTTTTTTAAGTTTCAGTCACATT ....x......x.........:..............:..x:xx....x..:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -50079833 -44150569 +3250 chr4 + 190214555 34102925 34102924 34102996 72 CTGCAACCTCCAGTTCCCGGGTTCAAGCAATTATCCTGTCTCAGCCTCCCGAGTAGCTGGAATTAGAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx..:.:.:.........::x..xx.xx.x........::.:...........:..x.x.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 15905799 NA +3224 chr4 + 190214555 34106337 34106336 34106472 136 TATATTTTTGTATATATTTATATATGTAATTTTAAAATTCATATATGTGTGTGTATATATATATACTTGTTTTATGATTGGAATCAATTTGCAATGCTTAAATCTCTAAAAAAAAAAGACATCAAGATTCTAATTT chr4 - 94230402 16723580 16723579 16723715 77506688 77506687 77506823 136 TATATTCCTATAGAAATAATTTTCTGGGATTTTAAAATATAAATATGTGTGCAGACATAAATTTATTTATTCCACAAATGTTACTAATGGCTACTACTTAAATAGAAAGAACCAGAAGAAATAAAAGATTAGATTT ......::.:..x.x..xxx.x.x..x:..........x:.x.........::x.:...x..x..:..:..::.::.x..xx.::...xxx:.x.:.......xxxx.:..xx.:....x..x..::x.:x:.... 136M 82/136 60.3% 136/94230402 0.0% 0/136 0.0% 17382757 NA +3088 chr4 + 190214555 34112199 34112198 34112301 103 CATATATA------TATGTATATACATATGTATACATATATACATATATATACACATATGTACACATATATATGTTTATAAATGACTAAAATACAAATTTTATTTGAAG chr4 - 94230402 72916836 72916835 72916944 21313459 21313458 21313567 109 CATACATACCACATTTTGTGTATATATATCCAGTCATGTACACATATATATACTGCTGTGTATGCTTGTATATTGTATCAGACTAATAAAATAGAAAACACGTCTGGAG ....:...------.x...:....:....x:.xx...:..:............xxx.:....::.x.:.....xx.xx:.:.:x.x.......x...x:x::.:..:.. 8M6I95M 68/103 66.0% 109/94230402 0.0% 6/103 5.8% -38804637 -55425765 +3314 chr4 + 190214555 34196932 34196931 34196992 61 TAGAGATATAAGATAATAAAAAGAAGAAATCTAAATTGTTCAAAGCATTTGCTTCTGGTGA chr4 - 94230402 21451680 21451679 21451740 72778663 72778662 72778723 61 TAAATAGATAATGCAATATAAGTAAGAAATTCAAATTGTTCAAAGGATTTTTTTCTGGTGA ..:.x.x....x::....x..:x.......::.............x....x:......... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 12745252 NA +3204 chr4 + 190214555 34209758 34209757 34209805 48 AAGTCCCATATATATATATATACACATATATATACACACACACACACA chr4 - 94230402 45271681 45271680 45271728 48958675 48958674 48958722 48 AACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.:......x........:............::.:...x....... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -11061923 -83168479 +3065 chr4 + 190214555 34209767 34209766 34209848 82 ATATATATATATACACATATATATACACACACACACACACACACATATATATATATACATACGTATATATCCTACTAGTTCT chr4 - 94230402 66904847 66904846 66904926 27325477 27325476 27325556 80 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACG--CATTTCCTCTCAGCTCT ......:..::......:.:...:.........:.:x:.x::x..x:.:....:.xx......--:..x....x::..:... 63M2D17M 54/80 67.5% 80/94230402 0.0% 2/80 2.5% -32695080 -61535322 +3298 chr4 + 190214555 34219663 34219662 34219751 89 TATATATACATATATACACATATATACACACACACACACACACACATATATATAATGGAATACTA------------TGCAGCCCTAAAAAGGAAAGAATT chr4 - 94230402 78588435 78588434 78588535 15641868 15641867 15641968 101 TATATATGCCTGTGGACACAGACATAGACACACACACATACACGCATTTTTCTATTGAAACATAAAAAATAAGAACTTGTAGACATAAAAATAATGGAATT .......:.x.:.:x.....x.:...x...........:....:...x.x.x..x..:..:.:x.------------..:..x.x......x:.x:..... 65M12I24M 64/89 71.9% 101/94230402 0.0% 12/89 13.5% -44368772 -49861630 +3156 chr4 + 190214555 34219680 34219679 34219724 45 ACATATATACACACACACACACACACACATATATATAATGGAATA chr4 - 94230402 21704675 21704674 21704719 72525684 72525683 72525728 45 ATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .:......::..................:.:....x....x.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 12515005 NA +3156 chr4 + 190214555 34219680 34219679 34219724 45 ACATATATACACACACACACACACACACATATATATAATGGAATA chr4 - 94230402 21701102 21701101 21701146 72529257 72529256 72529301 45 ATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .:......::..................:.:....x....x.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 12518578 NA +3672 chr4 + 190214555 34232659 34232658 34232764 106 GAATTTCTTCTT-----TCCCTTTCCCTTTTCTT----TCTTTTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTCCTTCCTT chr4 - 94230402 45185573 45185572 45185686 49044717 49044716 49044830 114 GGATTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTT-CTTTCTTTAACTCTTCCCTTTCTCACTT .:....x.x...-----..x:.......:...:.----..xx......x:...x...........::..:x...:::x....:...-...:....xx:....:....:..:x... 12M5I17M4I48M1D28M 76/105 72.4% 114/94230402 0.0% 10/105 9.5% -10952914 -83277488 +3109 chr4 + 190214555 34232663 34232662 34232723 61 TTCTTCTTTCCCTTTCCCTTTTCTTTCTTTTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTT chr4 - 94230402 19711340 19711339 19711400 74519003 74519002 74519063 61 TTCTTTTTGTTGTTTACTGTTACTTTATTTTTTATCTTTCTTTCTTCCTTTTTCCTACTCT .....:..x::x...x.:x..x....x......x............:.......:.x..:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 14521323 NA +3524 chr4 + 190214555 34232845 34232844 34232918 74 CTGCAACCTCTGCTTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCTCGAGTAGCTGGGATTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x:.:.::..........x...x.xx.x........:..:.........:.:.:..x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 16035719 NA +3071 chr4 + 190214555 34266181 34266180 34266259 79 AGGGAGGAACGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAGGGAAGGAAGGAGAGAAGGAAAGAGAAAGA chr4 - 94230402 48273061 48273060 48273139 45957264 45957263 45957342 79 AGCAAGTAGCTGAAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA ..x:..x.:.x......::...x.....::.x......:::x:.x::x..:.x..:......::.:.:.....:...:. 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% -14006880 -80223522 +3188 chr4 + 190214555 34277113 34277112 34277278 166 GAGGATTTTTGCATTTATGTTCATCAGGGATATTGGTCTGTAGTTTTTTGGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTTGGTTATGTCTTTCCTGGTTCTGATATATGGGTAGTATTGACTTCATAGAATGAAGATAATGGGTAATACTTCATTAGATTG chr4 - 94230402 56883320 56883319 56883468 37346935 37346934 37347083 149 GGGGATTT---CATTTATGACCTTTGGAATTGT--ATAAGGAGCTTTTTGGTGTTTTTGTTGCTGCTGTGGTTGTTTTGTTGATGGTATTCTGCTGTTTTAGTTCTG-CATA----------CTACTACAAAGAAAGAA-AGAAAAAGTATTTTTTTTCTAGATTG .:......---........x:.x.::.::x.:.--:.xx.x..:.......x..........:..:...x...........xx.x.xx.x:xx..x.::.:......-:...----------:x...x..x....x...-.x..x::...x.x:..:x:....... 8M3D22M2D72M1D4M10D17M1D26M 101/149 67.8% 149/94230402 0.0% 17/149 11.4% -22606207 -71624195 +3084 chr4 + 190214555 34277145 34277144 34277218 74 TTGGTCTGTAGTTTTTTGGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTTG---GTTATGTCTTTCCTGGTTCT chr4 - 94230402 28341172 28341171 28341243 65889160 65889159 65889231 72 TTGGTTT----TTTTTTAGGGTTTTTGTTGTTGTTATGTTTGTTTCCTTTTTTGCTTGCTATA-CATTCATGGCTCT .....:.----......:.................:.xx......:x.......---.:...:-.x...x...:... 7M4D43M3I6M1D13M 57/69 82.6% 72/94230402 0.0% 8/69 11.6% 5935973 NA +3088 chr4 + 190214555 34325339 34325338 34325425 87 TTTTCTGTTTGTTTGTTTGTTTGTTTATACAATTAGTGTTGACATCAGTTTAAAATAATGGGTTATATTATTTTCAAGCT----TCATGAT chr4 - 94230402 39732493 39732492 39732583 54497820 54497819 54497910 91 TTTTCTGCTTGTTTGTTTGTTTGTTTTTTAATTTAGCTCTGAGAACATTTTTAATTATTAAGCTTCTGTACTTCCAGATTTAAGTCATGAT .......:..................x.xx.x....:x:...x.x..x...x..x..x.::.:.x:xx..:..:..:::.----....... 80M4I7M 61/87 70.1% 91/94230402 0.0% 4/87 4.6% -5407154 -88823248 +3142 chr4 + 190214555 34338685 34338684 34338765 81 ACACTTATTGATTACTTTTTCAAGAGTTCAGTGGAGGAAGTCACTGCAGATGTGGTGAATTTTTTTTTTTTCTTTTTGACA chr4 - 94230402 86072366 86072365 86072446 8157957 8157956 8158037 81 ACATTTTTTGATTACTTTTTCAGGTTTTCAGCTTATAAGGTCTGCTCAAATATTTTGTGTTTCTTTCTTTCTTTCTTAACA ...:..x...............:.xx.....:xx.x:.:...xx:x..:..:.xx..x:...:...:...::..:..:... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -51733681 -42496721 +3220 chr4 + 190214555 34348339 34348338 34348395 57 TATATAAATATGTGTGCATATATATATCCTTTATTATATTATCCTTTTGTTTCTTCA chr4 - 94230402 11891932 11891931 11891988 82338415 82338414 82338471 57 TATCTAGATATGTGTGCATATATACACACTTTATAATATAATTTTCTTCTCTCCTCA ...x..:.................:.:x......x....x..::.:..x.:..:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 22456407 NA +3187 chr4 + 190214555 34384410 34384409 34384490 81 TTAAAACAAAACAAAACAAAAAAAACCTTACGCTATTAGTAATTGTATTTCAATTTGAGGATAGAATATATGGATTTTCTC chr4 - 94230402 85952779 85952778 85952859 8277544 8277543 8277624 81 TTAAAACAAAACAAAACAAAAAAAGCACCAACAGATCAGTAATTACATTACTACCTAGATACAAAACAAGTGCAATTTCCC ........................:.x::.xxxx..:.......::...x.x.::.:::x.:.:..:.x:..x.x....:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -51568369 -42662033 +3077 chr4 + 190214555 34416430 34416429 34416473 44 TCAAAAAAACAAACAAACAAACAAACAAAACCAATTTAAACAAA chr4 - 94230402 88451174 88451173 88451217 5779186 5779185 5779229 44 TTAAAAAAACAAACAAACAAACAAAAAAAACCACTACAAGCAAA .:.......................x.......x.x:..:.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -54034744 -40195658 +3143 chr4 + 190214555 34461024 34461023 34461059 36 GAAAACAAAACAAACAAAACAACAACAACAAAAAAA chr4 - 94230402 59458500 59458499 59458535 34771868 34771867 34771903 36 GAAAACAAAACAAACAAAACAACAACAACAACAAAA ...............................x.... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -24997476 -69232926 +3303 chr4 + 190214555 34477761 34477760 34477829 69 TGTCTTTCTCTTCCTCCTCCTCCCCACCCCCTCCTCCTCCTCCTCCCCTTCTTCTTCTTTGTCACCCCC chr4 - 94230402 61788467 61788466 61788535 32441868 32441867 32441936 69 TGTTTATCGATTATTCCTCCCCCCCCCCCGCTCCTTCCCCTCATCCCTTTTCTCTCTCCTTTCGCCCCC ...:.x..xx..x:......:....x...x.....:.:....x....:..::...::::.x..:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -27310706 -66919696 +3306 chr4 + 190214555 34504117 34504116 34504186 70 AAATACAAAAAT-GTGTGTGTGTGTTTGTGTGT----GTATATATATAAATATATATATATATATATATATATAA chr4 - 94230402 26165523 26165522 26165596 68064807 68064806 68064880 74 AAAGACAAAAATTGTTCGTGTGTGTTTGTGTGTATCTGTATATACATAAATATACA-ATAAGGACACATATACAA ...x........-..x:................----.......:.........:.-...x:x.:.:.....:.. 12M1I20M4I19M1D18M 58/69 84.1% 74/94230402 0.0% 6/69 8.7% 8338594 NA +8311 chr4 + 190214555 34529235 34529234 34529382 148 AAGCCAGCAGCTCTGTTGATGCTACAGCTTATTAAAGATGCAAATTAAAAATATCAAAAAGCATGGAAATTTGCTTAACCTTTTA-CAGAATGTAAATCTTTAATCTGATCTTAATATGAACTTCATTGATTTGCT-TTAAGTTTAATAA chr4 - 94230402 21212724 21212723 21212872 73017531 73017530 73017679 149 AAACCAGCAATTCTGGTGATGCTACAGCTCATTAAAGATGCAAATTAAAAGTACTAACAA-CATAGAGATTTGCTCAACCTTTTACCAGTATGCAAATCCCTAATCTGATCCTTATACAAGGTTGGTTGATTTATTACAAAGTTTAATAA ..:......::....x.............:....................:..::..x..-...:..:.......:.........-...x...:.....::..........:.x...::.:x..x:.......::.-:x........... 60M1D24M1I50M1I13M 119/147 81.0% 149/94230402 0.0% 3/147 2.0% 13316511 NA +3013 chr4 + 190214555 34551724 34551723 34551797 74 TGAAATATAGCCAGTCCCATTTTTTAATGTTTAACAAAAGTGATAGTCTATAATTTTAAATATATTTTAAAAAC chr4 - 94230402 67379167 67379166 67379240 26851163 26851162 26851236 74 TAAAAAAGAACAAATTCTGTCTTTAAATACTCCAGAAAGTTAATAGTCTATAATATTCAAAATATTTTCAAAAC .:...x.x.:.x.:.:.::.:...x...::.:x.x...:x.:............x..x..x.......x..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -32827443 -61402959 +23549 chr4 + 190214555 34552137 34552136 34552731 595 TTATTCCAGCTACTATAATTACCATACTGTAACAGAGTTTTCT-CTGGAAATTGGTATAAGTTAAATAACTGGACCATTCTCTCCAGTGCTTACCTGTTTTCAATCTGATAAA-GAAAATC-AATAGCCAGG-TTAGTAAGCAAATATTTGGCAAGC---------AATGCATTTCTAATAATGAAACTGATAATTATACTTCTTTCATAGAGCTGTAATTGAATGAATTTAATTGCCTCTTCCGTTTAACTTTAATGCTAGGTTTCAAATTGTTGTATGGACAGGAAAGTAACATTAGAAAAATTACTCTACTGTTGCTTTCTTTTCTATACAGTGGTTTGAACTCAAGCAATAAAGTTAAATGAAAAAGGCTCTATACTCAATTTTCAATTATAGTAAAGGCAGGGAGCCACAATTATCCCTTTCATTACCATGATGCTTTTCATTGCTGCCTAGGAAACTTCCTCCCTGTTGTT--------------TTTTGATGCTGCTGTGCTTCTCAAAATGAAGAGCACTTGAAAATGGA--AGGTTAAAAGTAAGGAACCAAATCAAAGGGAAAATGTGAAAATGTAAAAATTGACATTATCAAGATGAAATGGTGAAGAAAAAT chr4 - 94230402 21217838 21217837 21218442 73011961 73011960 73012565 605 TTTTTTCATGTATCACAATTACAACA--GTGACATAGTTTTCCACTGTAATTCAGCATAAATTAC----CTGAACCACTGTAGTATGATGTTACTTCTTTTCCACCTCATCAGTGATAATCTGGTAGCCAGAATTAGTAAGTAAATATTTGGCAAGCCTGGTAAGCAATCCTTTTTTATTACTGAAATTTATAATTACAGTTCTTTTCCTATTCAATAATAGAATATATCCAATTGC-TCCTCCTTTTAACATTAATGCTAGGTTTCAAACTGGTGAATGGACAGGAAAGCAACATTAGAGACATTATTCTACTGTTGCTTCCCCTCCTCTACAATGATTTGAACTCAAGCAATAAAGTTAAATGGAAAAGGCACTATACTAGATTTTCAATTACAGCAGAGGCAGGGAGCCACAATTATCCCTTTCATTACTGAAATACTTCTCATAGCTACACAGGCAGCATCCctgctgctgctacttctgctgttcctgttgctgttactgctgctCTTAAATTGAAGTGCCCTTGAAAAGAGATGAGGTTACAGGT----CACCAAGT-------AGAATTTAAAATTGCGAAAAATG-TATATTTAAAGGAAAATGGAAAAAAATAAT ..x..:..xx..::.:......x.:.--..:...x.......:-...x..x.::.:....:...x----...:....:.x.xx:xx.xxx....:.x.....x.:..x..x.:-..x....-::.......:-........:...............---------...x.x...:..x..x.....:.x.......:.x......:x:x:xx.x:....x....:x..::......-..:...x......x..................:..x..x.............:.........:.x....:.............:.::.:..x....:..:...........................:.......x.......x:...........:..:.:................................::x:..:...:....x...:.x:...x.:.x...::x...:..:.--------------.x...x..:.:...:xx:...:...x.....x..x........x:..--......x.:..----x.....:.-------.:...x.:...x..::....x..-:..xx.:..::x:......x:..:..x... 26M2D15M1I21M4D44M1I7M1I10M1I24M9I71M1D239M14I47M2I11M4D8M7D23M1D30M 432/576 75.0% 605/94230402 0.0% 48/576 8.3% 13334299 NA +3210 chr4 + 190214555 34562040 34562039 34562109 70 CCACATACATATATATACATATATATACACACACATATATATACATATATACACATGCATATATACATAT chr4 - 94230402 7596411 7596410 7596480 86633923 86633922 86633992 70 CCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.:.x..::...:.x..:...........:...:....:.x.:......x:.:...:::.::.x:.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 26965629 NA +3055 chr4 + 190214555 34562044 34562043 34562106 63 ATACATATATATACATATATATACACACACATATATATACATATATACACATGCATATATACA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x...:.x...:...:...::.:x..::x::....x...............:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 17041295 NA +3338 chr4 + 190214555 34580888 34580887 34580956 69 CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTTTCCTT chr4 - 94230402 9693767 9693766 9693834 84536569 84536568 84536636 68 CTTCTTCCTCTCCCTTTCCCTTT-TTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ......:..:..::.:.::....-......:x:...:.x:...:x..x...:...............:. 23M1D45M 50/68 73.5% 68/94230402 0.0% 1/68 1.5% 24887121 NA +3069 chr4 + 190214555 34580922 34580921 34581052 131 TCTTTCTTTCTTTCTTTCTTTCTTTCCCTTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT .:...:...:....:...x.:::..x.:...:..:.x.x.:x.xxx.::..::xxx...:xx:x...:.x:.....:..x:.x:x..:.xxxx.x::......::...:.x........x...:...:.:. 131M 75/131 57.3% 131/94230402 0.0% 0/131 0.0% -5637758 -88592644 +3310 chr4 + 190214555 34581281 34581280 34581377 97 TTTGTGGAAAATAAAAAAAGACAAATAAATGGAAAATAGAGACAGCATATGTAATAATTAGTGTCAAAAATAATAGCAAATAAAAATAAAAAATTGA chr4 - 94230402 6917744 6917743 6917840 87312563 87312562 87312659 97 TTTTTCAAAAATTAAAAAAATAGAATAGACGAAGCAGGGAAACAGAAAATGGAGAAGTCTGTGTTCAAGATGTTGGTAAAAAGAAGTAAAAAATTAA ...x.x:.....x......:xx:....:.:.:.:x.x:..:....x.x...x.:x.:.:x....:x..:..:x.:.:...x.:..:.........:. 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 27663537 NA +3218 chr4 + 190214555 34583043 34583042 34583116 74 TCACTTTATTTCATTTATTGTAAAATATATGCTTAAACACATATCAAACAAAAATCTACTTTACTTTTTTTAGA chr4 - 94230402 86110149 86110148 86110222 8120181 8120180 8120254 74 TCACTCTATTTTATTGAGGCCATAATGAATGCTTAAATTCATATCAAAAAGAAAATTATTTCATTATTTTCAAA .....:.....:...x.xxx:.x...:x.........:x.........x.:...x:..:..:.:.x....:.:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -51527106 -42703296 +3188 chr4 + 190214555 34601381 34601380 34601461 81 TTACCCTAAGAAATATTTGCATTCCAGCCTGGGCGACAGAGTAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAA chr4 - 94230402 28588134 28588133 28588214 65642189 65642188 65642269 81 TTACTCTAGGAAAAATTTGAATCCCAGCCTGGGTTATGCGTTTTGGTTCCATCCTTAAAAAGAAAAATCACAAAACTAAAA ....:...:....x.....x..:..........:x.::x:x.xx.::...:..::x.....:.....xx.x....xx.... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 6013247 NA +3115 chr4 + 190214555 34602535 34602534 34602616 82 CTGCAGGCTCAAGCTCCTGGGTTCAAGCAATCTTCCTGCCTTGGCCTTCCAGGTAGCTGCTACAACCAGTGCATGCCACTAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGT ..:...x.:x.....:...........::x.::x.xx.x..::.....:..:.......xx..x..xx.....--.....:. 73M2D7M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 16405409 NA +3124 chr4 + 190214555 34616002 34616001 34616077 76 GCAGA-AAGAACTCTGAAAATGTGATCCTCCAGAAAAGAAAAAGAAAGAAAGAAAAAAAAAAGGCACTGGCAAAAAC chr4 - 94230402 25222957 25222956 25223033 69007370 69007369 69007446 77 GCAGATGAAAATTACACAGATGTTATCCACCAGAAAAAAAAAAGAAAAAAAAAAAGAGGACTTGTACAGGTAAAAGC .....-:.:..:.x::x.:....x....x........:.........:...:...:.::.xxx.:..x..:....:. 5M1I71M 53/76 69.7% 77/94230402 0.0% 1/76 1.3% 9393045 NA +12065 chr4 + 190214555 34643515 34643514 34643923 409 TCTATTTTTTAATGGTTTTCAGATTAATTTGAAG----CAAGATTGAGGAAGGTTATTTTATGCACAACTCCACAGCTTTAATTGCAACATTTATCATATGAGAACTCTAGCTGCCAAGAATGTGTTGGCACTAGGCAAATGTAT--AGCTTGTCCACAGGGATTTTATTATCCAACATCAAGGAATGTCTGCAACACAGTGGTCATTGTCACTGAGAGCTTCCTCTAGGCAGTAGAATAACAAGCTTGAGAAGAGAATACATAGAAATTTAATTTAATTA-AAATATTCTTTTAGTATGGTACGTGTTTTGTACAATCCTTTTATAATGGATTACCATACATAAA--TATTAATACACTAAGTCACCAC-AGTCTTCAAATCATTGTTATTATAGAATGCAAAAATCCTT----AAGAATAT chr4 - 94230402 21240024 21240023 21240436 72989967 72989966 72990379 413 TTTATTCTATAATG--TCACAGACCTAGTTGGGGTTAACACGAAGTAGGCAAGTTATTTTATGCACATCTCAATAGCTTTAATTGAAACATTTATCATTCAAAAGCTGAAGCTGGCAGGAGAGTATTGACATTAAGAGAATATATGCAGATT-CCCACAGGGATTTTATTATCCAACATCACGGAACACCTGCCACACAGTGGTCACTGTCACTACAAGCAT-TTCTGACCGACATAATAACAAGTATGAGAGGGGCAAAGAGCGAAATTTCCGTGTATTATGTGCACATTTGTTGTTGAGCACAAGTGCAGCACTAAACTTTTATGAAAGCTTTCCAGAAAAAAAGCTATTG------TGAATCATAATGAGGCTTCAAATCATAGTTATTACTTTAAGTAAGACTGCTTTTAAGAGAATAT .:....:.x.....--.:x....::x.x...::.----..x..xxx...x.:...............x...x.:...........x............x::.:.:..xx.....x..:..:x..:...:..:..:.x:...:...--..x..-:...........................x....:::....x............:.......:x:...x.-:...::x.:::.x.........:x.....:.:.x.x.x.xx.......xxx.xx....-:x::.:x:..x.x..xx:.:..:x..x:x.:..x.xx.......:.x:.x..x...x.x.x...--....:------.:.:...:x.:-..x...........x.......:xxx.x.:..:.x.x...----:....... 14M2D18M4I107M2I5M1D69M1D58M1I64M2I5M6D11M1I40M4I8M 278/399 69.7% 413/94230402 0.0% 24/399 6.0% 13403491 NA +3751 chr4 + 190214555 34645554 34645553 34645683 130 ATATATATACACACCATATATATATATACACCATATATATATGTGTATATATGTAT--------------------ATAT-GTGTATATATTTGTGTATATATATACACGTATGTGTATACATATGTATATATATATACACACCATATATA chr4 - 94230402 37362960 37362959 37363110 56867293 56867292 56867443 151 ACACACATAATCACCATAGATATATCTGAGTCCTCTGTATCTCAGTTATTATTTATCATGTTCTGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTA .:.:.:...xx.......x......x.:x::.x.x.:...x.xx..xxx...x...--------------------.:..-.....:...:....:....:..::...x:...:.xx:.::......:...:...x:......x....:.. 56M20I4M1I70M 88/130 67.7% 151/94230402 0.0% 21/130 16.2% -2717406 -91512996 +3497 chr4 + 190214555 34645751 34645750 34645822 72 TGTATACACATATGTATATATATACACAAATATATACACATATATATATACATATATACACAT-ATATATATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA ...:....:.:x........:..:...........xx:::.....:.:..::...x:.....:-....:.... 63M1I9M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% -2717289 -91513113 +3480 chr4 + 190214555 34666177 34666176 34666279 103 TTCTCCAG--AGAAACAGAATAAATAGGATATCTGTGTGTGTATATATATATACACACACATA----TATATGTATATCTGTGTGTATATATATGTATATGTATATATA chr4 - 94230402 81401266 81401265 81401373 12829030 12829029 12829137 108 TTCTTCAGCTAGAAATGGGGAAAA-AAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....:...--.....::.::x...-.:.....:.x.....x.:.:.x..x.x.:.:.:.....----..:.....x:.x..........x..:.x:.....x..:..:. 8M2I14M1D38M4I42M 73/102 71.6% 108/94230402 0.0% 7/102 6.9% -46735089 -47495313 +3385 chr4 + 190214555 34666241 34666240 34666309 69 ATGTATATCTGTGTGTATATATATGT------ATATGTATATATACATATATATACACACACACAAGCACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....:.:.x......:...x.:....------........::x.....xx...:...........x:..x..... 26M6I43M 54/69 78.3% 75/94230402 0.0% 6/69 8.7% 26270453 NA +3679 chr4 + 190214555 34666247 34666246 34666318 72 ATCTGTGTGTATATATATGTATATGTATATATACATATATATACACACACACAAGCACACACACTCTCACTC chr4 - 94230402 24136193 24136192 24136264 70094139 70094138 70094210 72 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACACCC ..x..::.:.....x....x.xx...x............:.....x...x....:......:.:.:x...:. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 10530054 NA +3854 chr4 + 190214555 34681083 34681082 34681211 129 TCACCCTGTTG--CCCAGGCT---GGAGTGCAGTGGCTTGATCTCAGCTCACCACAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGCAGCTGGGACTACAGGCGTGCACCACCATG chr4 - 94230402 18197076 18197075 18197206 76033197 76033196 76033327 131 TCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....x..:..--xx......---..x:::..x:x.....::x...xx.:-.:...:..:xx:x..:.::........:.x...x.xx.x........:..:..:......:......--..........::.. 11M2I8M3I26M1D67M2D14M 87/126 69.0% 131/94230402 0.0% 8/126 6.3% 16484007 NA +3009 chr4 + 190214555 34682996 34682995 34683088 93 TTCTTTCTTTCTTCCTTTCTTCTTCTCTTTCTTTTTTCTTTTCTTCTTTTCCTTCATTTTCTTTCCTTTCCCCTCCTTTTCTTTTTTCTTTTT chr4 - 94230402 83960512 83960511 83960604 10269799 10269798 10269891 93 TTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTT ...x..:x....::...:.:xx.x.......:...x.::..:x.x......:.xxx:...:x..:....x::...:.:......:x::x.... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% -49277516 -44952886 +3538 chr4 + 190214555 34683003 34683002 34683109 107 TTTCTTCCTTTCTTCTTCTCTTTCTTTTTTCTTTTCTTCTTTTCCTTCATTTTCTTTCCTTTCCCCTCCTTTT-------CTTTTTTCTTTTTACACAGTATCTCACTCTGTTG chr4 - 94230402 28866472 28866471 28866585 65363818 65363817 65363931 114 TTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACCTTGATGTTTTTCATTTCTTAGAGGAAATGACTTTGTTG ...:...x.:.....:..xx..:....:.x:x....:..........xx........xx.x...::::....:-------:x......x...:x:.x..x.xx.x...:..... 73M7I34M 73/107 68.2% 114/94230402 0.0% 7/107 6.5% 5816531 NA +3090 chr4 + 190214555 34684149 34684148 34684213 65 AGAAAAAAAAAGAGTGAGAGAGAGACAACAAAAGCAGATCCAGAAATGGTTAAACTTGTGGCATT chr4 - 94230402 13850700 13850699 13850764 80379639 80379638 80379703 65 AGAAAAAAAAAGAGAGAGAGAGAGAATTTAAAAGTAAAGTCACAATTTGTCAGACTTTCTGCATT ..............x..........xxx:.....:.:.x:..x..x.x..:.:....x:x..... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 20833449 NA +3343 chr4 + 190214555 34711731 34711730 34711808 78 GAAAAAAAGAAAGAAGAAAGAAAGGAAAGGAAAGAAGAAAGGTAAAGGGAAAGGAAAAAGGAA-AGGGAAAGAAGAAAA chr4 - 94230402 84397278 84397277 84397356 9833047 9833046 9833125 79 GGAAACAAATTAGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGAATATGGTaaaaaaaaaa .:...x..:xx...::..:.x.x..:.....:....x.....x.....::...:.:.......-.x..x..:..:.... 63M1I15M 56/78 71.8% 79/94230402 0.0% 1/78 1.3% -49685547 -44544855 +25537 chr4 + 190214555 34718759 34718758 34719462 704 TGGAATAATTCCATGAGGCCCTATTAAGAGTTTGCTTAATCAGAGAAAATATCAAAGCGTTTAATTGTTTGCAATTCTTCTGAAGTTGCAGAAACCAACAGCCAATTAGTACTCAAAGT-TCTCTTTTCAGATGGGAAACTAATCTCTTTTTAATAGAAACTTTTCCTACTGTTTTTTTTTTCTTGGAAACACACTTTGCAA-CCCAAATCACATTTAGAATACAATGAAACAGAATATGAAATGATATTTTTCTGCAAACTATCAT-CTTTTCTGGTTCATTTTCAAGATCTTTGATATTTACATATGACCTTTCCATTTTTATTAACAGTTTGTTGAATTTTTGCATTCCAGCCAGCAGAAGAGAAAGGTAATTTACAGAAAGATTTGACAGTTATACACACAGCTATAAACTTCAGTCCATTAACTTATTTCTTGTGTAACCTTTAGTCAATTCTACCAAAACATCCATATAAGCA-TATGCCTT-TTTTCCTTTATGTTAAAGAGGTCTCATTATGGGACCCTATTTGTAGAATGTCAAAAGAAAAGGAA--------ACAATTTTATAGTGTCTCCTTA-TGGTTCAC---AGATGTTTATGGCTTTTACTTTTTAAGTCACACAAGTAAAAATCAAATATATTTATG-----TGTTGCTCAGATTTC-TATTACATGTGAATGGATACATATTTGACATCTTTTATTTGGTTAATTTATAA chr4 - 94230402 21246139 21246138 21246821 72983582 72983581 72984264 683 TAGAATAACTCCGCCAGTCTCTATTTTGAGCATTCTTGATAAGGTAAA----CAAA------------------TTATTTCTATGCTAGAGAAACAAACAGCCAATTAGTGATCAAAGAACCTTTTTTTCTATGT-------ATCTAAAGCAAACAGAATCTTCTCTCA----TCATACTTCGATAAAAACACATAACGTAAGATCTACTCCTCTTTAGAGTCCA-TGAGGCAGAATATGAAATTATATTTGTGTGCAAACTATCATATTTTTCTGGTTCATTTTCAAGATCTGTGGTATTTACATATGACCTTTCCATTTTTATTAACAGTTTATTGGATTTTTGCATTCCAGCCAGCAGAAGAGAAAGGTAATTTACACAGAGATTTGACAGTTATACACACAGCTATAAACTTCAGTCCATTAACTTATTTCTCATGTAACCTTTACCTGATTCTACTCAAACACCCAAATAAGCAGTATATCTTGCTTTTCTTTATGTTAAAAAGCCCTCGTTGTAAGTCCCTATTTATAGAACATCAAATGGAAAGAAAAGCTCTGCACAAGCTTTTATTAGAGCTTTACTTGTTCTCTTAGTATGTCTATATCT----CAATTTAAATGGTATAATTCAA---CAAAGGCATTTATAACTGCTGTTGTTTTCTTGTCTTAGTACA---GCATGGTAACATATTCTCCCTGCttttttttttttttttttaa .:......:...::x..x.:.....xx...:x.x...:..x..:x...----....------------------..x..::x.x.:.:x......x..............:x......x-:..:....:xx...x-------....xxxx:x..:....x...:..::.----.:x.x:..:xx.::.......:xx:.:..-x:.x.x..x:x......:.x..-...::.............x......x.x.............-:........................x..:.....................................:...:.........................................x.:.....................................................::...........x:::.......:x.....:...x.......-...::...-:...:............:..x:...:..:.::.x........:.....::.....x.:....:..--------....x:..x..x.:xxx.:...-.x....x.---:x....:...:x..----.xx.....:.x::.:..x.x..---....x::......:-----.....:.:xxx.x..-..x....---.x....xx.......:xx.x.x:...x...xx..xx...x... 48M4D4M18D45M1I15M7D27M4D29M1I22M1D41M1I211M1I8M1I65M8I22M1I8M3I14M4D22M3D14M5I15M1I7M3D43M 501/660 75.9% 683/94230402 0.0% 67/660 10.2% 13472620 NA +3037 chr4 + 190214555 34721165 34721164 34721218 54 ATATATATGTGTGTGTGTGTATATATACATATATATATATGTCCTAAATCTTTT chr4 - 94230402 89821281 89821280 89821334 4409069 4409068 4409122 54 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTT ..:.:.:...x.x.......:......:........:..::x...x.....:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -55100116 -39130286 +5455 chr4 + 190214555 34731112 34731111 34731340 229 ACATCATGCAATGAACTGAAAA-AGGTGAAAGTGATTACTAGAAGAAAGC-AACATTTGGAAGGAGAGTTGAAGGAAGCTAAATGCACAGTACATGCATGGCAAGAAATCTGCTGAACAAAACAAATTACCTAACACTCCCAGAATGACTCACTGCCTTGGGGAAATACATAACAG--AACACAAAGAAGAGGAAAAAAATCAG--TGAAAACTGCAATCATAACA-ACTACAAGA chr4 - 94230402 21254492 21254491 21254722 72975681 72975680 72975911 231 ACATAATCAAGTAAATACAAAACAAGTTAAAATGATTAGCAGAGGTAACTGAACACACTGGATGTGAGGTCAAAGATATTT--TACATAG---ATTCATGGTAACGTATCTGCTTCACAGAGCAAATTACACAACATGACTAGAACAATTGACTGACTTGGGAAATCACAAAATAGTAAACAATAAAAACAGGAGAATAATCAGAATTAACGCTGGAAAGATAATACACCACAAGA ....x..xx.:.:..:xx....-.:..x...:......x:...:.x..x:-....:x:x.:.x.x...x.x..:..x::.x--.:..:..---..x.....:..x:x.......xx...:.:........x:....:xx.:....::.:.x....x......:..x:...x..:..--....xx..:..x....:..x......--.x..x:...x..xx....:.-..:...... 22M1I27M1I30M2D7M3D83M2I26M2I20M1I9M 152/224 67.9% 231/94230402 0.0% 12/224 5.4% 13476620 NA +3060 chr4 + 190214555 34738696 34738695 34738767 72 TGAAAATAAATAACTTCTTTTTTTTTAGAATTTTTTTTTTGTTTTTATTCTGTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 88358284 88358283 88358355 5872048 5872047 5872119 72 TGAAAAAGGATAAAACATTGATTTTTATATATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCT ......x::....xx:x..xx......x.xx.......:x:::..x.....x..................:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -53619588 -40610814 +3058 chr4 + 190214555 34738718 34738717 34738778 61 TTTTAGAATTTTTTTTTTGTTTTTATTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTT chr4 - 94230402 19885178 19885177 19885238 74345165 74345164 74345225 61 TCTGAGAAGTTTTCTTTCGTTTTAATTCTCTTTTCTTTTTTTTTTCCCTTTCTCCCGTTCT .:.x....x....:...:.....x.....x....:..........:::...:.:::x..:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 14853540 NA +3429 chr4 + 190214555 34738728 34738727 34738788 61 TTTTTTTTGTTTTTATTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAAATGGAA chr4 - 94230402 39136250 39136249 39136310 55094093 55094092 55094153 61 TCTTTGTGTTTTTTAATCTGTTTCTTTCTTTCTTTTTTTTTTTTGTCCTTGTGGAAGGGAA .:...x.xx......x.......:...:...:............x..:..x..:..x.... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -4397522 -89832880 +3133 chr4 + 190214555 34738733 34738732 34738803 71 TTTGTTTTTAT-TCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAAATGGAATCTTGCTCTGTTACC chr4 - 94230402 4862505 4862504 4862576 89367827 89367826 89367898 72 TCTATTATTATATCTGTATTGCTGTTCTTTTTTTTTTTTCTTCTTTTTGAATGATACTACTGCTTTATTACC .:.:..x....-.....x..x:.x..:............:...........xx:x.x.x:....:.:..... 11M1I60M 53/71 74.6% 72/94230402 0.0% 1/71 1.4% 29876228 NA +3295 chr4 + 190214555 34738735 34738734 34738802 68 TGTTTTTATTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAAATGGAATCTTGCTCTGTTAC chr4 - 94230402 5847628 5847627 5847695 88382708 88382707 88382775 68 TGTGGTTATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ...xx.....x..:..:.x.x:..............:.:........:.x.xx:........:x..:. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 28891107 NA +3021 chr4 + 190214555 34751168 34751167 34751235 68 CCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGACATTAGAACATTATCTTACACATGAACAAAA chr4 - 94230402 71716850 71716849 71716917 22513486 22513485 22513553 68 CTGTTAAAAAAAACAAAACAAAAAAAAAAACAGCTGACAATTGAAAATAAGCTAGCAGAAGAACAGAA .:..:........x....x...........x::x.....x.x...x..x.x..x:..x.x.....:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -36965682 -57264720 +10746 chr4 + 190214555 34767576 34767575 34767918 343 GAAGACATAGTTGCATTCAATACAGACATAGATCTTCAGAAAGATATTTTCATAAGCAAGCTTTGCAGGCATTCAGCTGTGCGTGCCAAGAATATCTCATGAAACAGAGTGCAGGTCTGGAATGAACACACTGGAGTATAGAGGAGACTGTTGAAACAGTAACTGCTTCAGTGACACCCAAAGCAGCAGGAGATGACAACAATGGTAGTATCAGCAGCAAAAAGGGC---TATTTTTTCCA---TTTATAAATGCAATTGAACATATGGCTAGCTTAATTAGGACTTTTCTCATTAACTCAGAATAGGCAGTCTCTATTGAAGCACCCTCGATAGAAAATCTGCATGAA chr4 - 94230402 21266609 21266608 21266943 72963460 72963459 72963794 335 GAAGCCAGACATGCATTTATTGCAGCCATGGGCCTT-AGGAACATGTTTTCAACTGTAAGCATTGCAGAAAGGCTACTGAGTTTACCAAATACACATCAGGACACAAAATGCATTCCAGGAATTAACATACTGTAGTACAGAAGGAAAGAAGGAAAC--TAATTGCTTCAGCGATATCCACAGCAGCAGGCGACAACAACGATGGCAGTATCAGCAGGAAAAAAAACACTGCTTTTTTCCACTGTTTATAAATGAGATGCAGCATATGGA-----TAATTAAGGCTATT-TCACTAGATCAGACTAGA-----GCTCTCCAAGCAATCACAAAAAAAGGTTTTCTTAAA ....x..x.xx......:.x.:...x...:.::...-..:..x..:......xxx.:....x......:x.xx.x:...x.:x.:....:x.:.:x...x..x...:.:....xx:.x.....x....:....x....:...:.::.xx:xx.....--...:........:..:.:...x.........x..::.....:....:...........x.....:::.---xx.........---..........x:..xx.:.......x-----......:.:..x..-...:..:x.....x...:-----x..x.:x.....x:.x.:.x.:..::.:.x.x.:.. 36M1D120M2D68M3I11M3I26M5D14M1D18M5D36M 229/329 69.6% 335/94230402 0.0% 20/329 6.1% 13500967 NA +3624 chr4 + 190214555 34783313 34783312 34783438 126 AAATAAAAAATAAAAAA--ATAAAGAAAAAAGAAATTGCTTTTTTTCA--TAAAAACTATTA----TGCTATTAAGAAATGACCAAAAATTTTTTAAAAGTTGCATTTTTGTTTCTTATTTCAAAATGAGGCAA chr4 - 94230402 27969806 27969805 27969939 66260464 66260463 66260597 134 AAATAACAATTTATAGACTACAAACAGCAAAAAAATTGTCCTTTACCAATTAGAACTTCTTAAAGATTTGTTTTAAAAGCAACCAAAAATGTTTTACAAGTTTCATTTCTATCAATTACTTCAAACTGATGCAA ......x..x.x.x.:.--.:...x.:x...:......:::...x:..--..:..x:.x...----.x:xx..x.:..:::.........x.....x.....x.....:.:.:xx...:......x...x.... 17M2I29M2I12M4I68M 87/126 69.0% 134/94230402 0.0% 8/126 6.3% 6813507 NA +4772 chr4 + 190214555 34797078 34797077 34797256 179 TTTTTCCTTTCCCTTTCCCTTACTCTTGTCCTTCCTTTCCTTTCTTTCTTCCTTTTTTTCCACCTTCCCTTCCTTCCTGCCTTCCTGTCTTCCTTCCTCCCTTCCTTCCTTCTTCCCTCCATCCCTCCCTCCTTCCTTTCTTTCTTTC--CTTTTCTTTCTCTTTCT-----TTTTCTTTCTTTCT chr4 - 94230402 79478396 79478395 79478574 14751829 14751828 14752007 179 TTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCT----TTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCA---CTACCTCAATTTATTTCTTCTGTTAGATCTCCTTTATATTGCCAGAGGTTTTCTTACTTTCT ...::.:...::x.:.......x.:...::...x..----....x.::::....:....:x.:.:...:.::::.:.......:x...:..x:..:.x.x....:::x.:....:..:...---..x....xx.::x..::....x.:--x.:.:....x.x..x.:-----.......x...... 36M4D81M3D24M2I17M5I14M 111/172 64.5% 179/94230402 0.0% 14/172 8.1% -44681318 -49549084 +3365 chr4 + 190214555 34797203 34797202 34797338 136 TCCCTCCTTCC--------TTTCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--CTTCTTTCTTTCTCTTTCTTTCCTTTCT---CTTTCTTTCTCTCTCTCTCTTTCTTCTTT chr4 - 94230402 45185596 45185595 45185743 49044660 49044659 49044807 148 TCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ......:.:.:--------...::.x...:x:.:..::..:......x....::x:.....-..........xx:....:.:..::.--...xx.x...:::x:.x...x:......---.x::.:.xx.....:x:.....::..... 11M8I42M1D25M2I28M3I29M 88/135 65.2% 148/94230402 0.0% 14/135 10.4% -10388393 -83842009 +3098 chr4 + 190214555 34797207 34797206 34797284 78 TCCTTCCTTTCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTT chr4 - 94230402 53118148 53118147 53118225 41112178 41112177 41112255 78 TCCTCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT ....:.:..x:.:...x.x:.:........:.x...x.xx..:..:.x....x...x...x..x......:::...:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -18320941 -75909461 +3965 chr4 + 190214555 34797220 34797219 34797368 149 TCTTTCCTTTTCTTTCTCTTTCTTTT-TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCT----CCTTCTCCTTCCTTCTTT chr4 - 94230402 45185593 45185592 45185743 49044660 49044659 49044810 151 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAAC--TCTTCCCTTTCTCACTTAGTGCTTCTCACTACTT-GTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT .:..:...:...:.xx...:xx....-.x:...x..........::..::x.:....x:::.............xx.--....:........x:.:xx.x::....x..x:..-x.......xx.:x.:...----:...x.:...:::..... 26M1I50M2D34M1D18M4I18M 98/146 67.1% 151/94230402 0.0% 8/146 5.5% -10388373 -83842029 +3263 chr4 + 190214555 34797268 34797267 34797384 117 TTTCTTTCTTTCTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCT-----CTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTT chr4 - 94230402 51102255 51102254 51102376 43128027 43128026 43128148 122 TTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTTTTTATCTATTCATATCTGTTTTCTT .......x.:.::.....:x...x:.:x..::xx.:x.....:....:.x......:.-----:....x:...:.::.:..:::......x.x:.:..::x...x.:.x.x::.x:..:... 58M5I59M 71/117 60.7% 122/94230402 0.0% 5/117 4.3% -16304987 -77925415 +3282 chr4 + 190214555 34797271 34797270 34797381 111 CTTTCTTTCTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTC chr4 - 94230402 82372332 82372331 82372438 11857965 11857964 11858071 107 CTTTCTCTCTACTTCTTTCTTTTGCCGTTCTTCCTTTTCCTTGCTTTACACATCTC----TCTTAAAAGTTTCCACTTCACCTTGTCCTCTGATCCAGTCCTCCCTCCCTC ......:...x...........:x.:x.::.......::...x....x:x:x....----....xxxxx....:x..:.x....x....::xx..:xx:.:...:...:.. 56M4D51M 70/107 65.4% 107/94230402 0.0% 4/107 3.7% -47575061 -46655341 +3141 chr4 + 190214555 34797303 34797302 34797403 101 CCTTTCTCTTTCTTTCT----CTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 78374924 78374923 78375028 15855375 15855374 15855479 105 CCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCTT .....:..x.......:----..:.::...........:...:....:xxx..:...:.:.xx...x.::xxx..:...:.x:.:x.:.::..::...:x:..:. 17M4I84M 63/101 62.4% 105/94230402 0.0% 4/101 4.0% -43577621 -50652781 +3269 chr4 + 190214555 34797317 34797316 34797488 172 TCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT------------TCCTTCCTTCCTTCCTTCCTTCCTC-----CTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCT----------TTTCTTTTCTTTTTTTCTTGCAATTTT chr4 - 94230402 162020 162019 162218 94068185 94068184 94068383 199 TCCCTTTCACATCTCCCTCTTTTTTTCCTCTACTGATTCCCCCTCTTTTTTTCCTCCTCTCCTCTCTGTCACATCACTGCTCTTGAGAGCTGGAGTCATTCCCTCCTATTGTGCAAACTCAACAACTTGTCTCATCCCCAAGCTTTTCTCTTTTTCCTCTCTCCATGCAGGACTTTCTTCATCTTCTTTTGGGAACTTT ..:..:..x.x::.:.:.....:....::..x..xx...:..:..:..:......:.::....::..x:.x:x::x.:x::..------------..x....:....x::x.x.xxx...-----...x:...x::...xxx..::::........:.:...----------:..::..:x.:..:..:.x.x..:... 83M12I25M5I37M10I27M 102/172 59.3% 199/94230402 0.0% 27/172 15.7% 34635297 NA +3284 chr4 + 190214555 34797417 34797416 34797464 48 CCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTT chr4 - 94230402 36509255 36509254 36509302 57721101 57721100 57721148 48 CCTTACTCCTCCCCTTCCTCCCCCCCCCCCCCCTTTTTATTTTTTTTT ....x.....:....:......:...:...::......x....:.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -1711838 -92518564 +3286 chr4 + 190214555 34804428 34804427 34804536 109 TGCATTAGGAATATTTACATTTCCCTTGTTATAAAATATAACATTTATTTCTCTCT-----------------TTTTTCTCTCTCTCTGTGTGTGTATATATATATATATATGTATATATATATAT chr4 - 94230402 83887380 83887379 83887492 10342911 10342910 10343023 113 TGCAGCAGGAATTTTT-CATTTC------------ATGCATCATTTATAATTTGCTGCAGTGGCTATGAGAAGTCTTTCCCTTTCTCTGTGTATGTATGTATATATAAGCTTTTATACATATATAT ....x:......x...-......------------..::.x.......xx:.:x..-----------------.:....:..:.........:.....:........x::x.x....:........ 16M1D6M12D21M17I53M 74/96 77.1% 113/94230402 0.0% 30/96 31.2% -49082952 -45147450 +3045 chr4 + 190214555 34804488 34804487 34804547 60 TCTCTCTCTCTGTGTGTGTATATATATATATATATGTATATATATATATATATCTGTATA chr4 - 94230402 83887440 83887439 83887499 10342904 10342903 10342963 60 TCTTTCCCTTTCTCTGTGTATGTATGTATATATAAGCTTTTATACATATATATTTTAATA ...:..:..:.x.x.......:...:........x.:x.x....:........:.xx... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -49082952 -45147450 +3016 chr4 + 190214555 34815781 34815780 34815846 66 AACTAAAACACACACACACAGACACACACACACACACACACACACTTGCTAATACTCCTCTGTGCT chr4 - 94230402 43966798 43966797 43966862 50263541 50263540 50263605 65 AACTGAACCATACACACACAAACGCACACATATACAAATACGTACTTATT-ATGCCCATCTCTTCT ....:..x..:.........:..:......:.:...x.:..::....::.-..:.:.x...x.x.. 50M1D15M 47/65 72.3% 65/94230402 0.0% 1/65 1.5% -9151017 -85079385 +3175 chr4 + 190214555 34840214 34840213 34840306 93 TGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCCCACCTTCATTTCTCTCTTTCTTTCTTAACTGTTCTACTATAC chr4 - 94230402 179497 179496 179589 94050814 94050813 94050906 93 TGCTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTCAATTAAACTGTCTGTCATAC ..:x.:...:::.......xx.::.:x.x::.x..:.:.x...:..:.....x.....x....:.....:..:xx....x:xx...:::.... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 34660717 NA +7843 chr4 + 190214555 34863846 34863845 34864207 362 AAAGCTTTAAGGGCTTAAGTTACGATCTTTCACTCTCATCTACTGTGTATTTGGCCACACAACTCAATAATGTTGACAAATCTAATTTTCTAAAAGGCTTGAGGTTGTTTTTGATGCAACAATGATAGAAAGATTTGCTGGTGGGTGTCTGAGTCCAGTGAGTCTTGTATTACAGCAATGAGGCAGCAGACATAATAAAAGACATTCTGGCCAAACAATTTTCTTTTATATCTTTAACAGTGTTTTTAGTCAGGGTAAATATCATTCCAGGTCTTTTATTAATTTGCCAGCCTATATATTAAAATGTAGACCTCAATCTCAGCCAACCTTTGAAGT---AATTGGAGGTAAGCAGAATTGCATGA chr4 - 94230402 21297535 21297534 21297874 72932529 72932528 72932868 340 AAAACTTCATACATGTGAGTTATAAACTTTCATTCCCTTTTGAAGTATACTCAGCCACAGAAGTCAATGGTGTTTACAAATTGAATTTTCTGAAATGCTTCAGGTTGTTTTGG---------TGA-AGAAGGATTTATCAGAGAGTGACTGATTCCAGATGTTTCTCTATTATTACCAGGTATCAG--GACACAATGAAAGACTCAAGGACCTGACTTTTCTCTATTGTACAATTGAAGGCGCTTTTCATGAGGGTTTACTATGTTCCA--CATATAACTGATTTGCT------TATTTTGAAATACAG----CACTCTTATCC-ACATTCAAACTTAAAGTTGGaaaccagtaggagtggttga ...:...:.x:x::x.:.....::.x......:..:.x.:.:xx..:..:.::......x..x.....::....x......:x........:...x....x..........x.---------...-....:.....::::.x.:...x....x.....xx:x.::.x.....:x:.x.x.x:x...--....:...:......x:xxx.:..x:..xx..:...x..:..:xx..:.x:.:.:....x:.x.....xx.:xx::.....--:x.x.x.:.:......:------...x..:....::..----..x...:.x..-..x..::..x.---.:.....:::x..:..:.x..xx... 113M9D3M1D60M2D81M2D17M6D15M4D11M1D11M3I26M 218/337 64.7% 340/94230402 0.0% 28/337 8.3% 13566311 NA +3611 chr4 + 190214555 34865560 34865559 34865652 93 TAGACAGCTTTACATATATATATGTATATATA---TGTGTATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTAT chr4 - 94230402 70982586 70982585 70982681 23247722 23247721 23247817 96 TAGGCTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...:.x::..:.:........x.:.x:..:..---.x.x.x:x.:.......:...:.:....:......x:...x........::...:.:::.. 32M3I61M 63/93 67.7% 96/94230402 0.0% 3/93 3.2% -36117026 -58113376 +3491 chr4 + 190214555 34865608 34865607 34865685 78 TATATATATGTATATATGTG-------TATATATGTGTGTATATATATGTATATATGTGTATATATGTGTGTATATATATGTATG chr4 - 94230402 70982598 70982597 70982682 23247721 23247720 23247805 85 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG .........x...x:....:-------.x:x.:.......:...:.:....:......x:...x........::...:.:::... 20M7I58M 57/78 73.1% 85/94230402 0.0% 7/78 9.0% -36116990 -58113412 +3036 chr4 + 190214555 34865694 34865693 34865733 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -54955588 -39274814 +3004 chr4 + 190214555 34865700 34865699 34865758 59 TGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATGAGTAAAATTAG chr4 - 94230402 52579775 52579774 52579833 41650570 41650569 41650628 59 TACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAAACAAG .::............................:.x..xxx.x..:..x.:x.....:x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -17714075 -76516327 +3134 chr4 + 190214555 34883618 34883617 34883666 49 AAGTATGATTTGTCTATTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTT chr4 - 94230402 2951010 2951009 2951058 91279345 91279344 91279393 49 AAGGATGATTTTTCAATTCTTTCAATTTCTTTGTCTTTTTTTTTTTTTT ...x.......x..x...:....xx.......x................ 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 31932608 NA +15981 chr4 + 190214555 34918616 34918615 34919183 568 TAGCATTTCCCTACCTTTGATAAGCTTTTCCTTTTGGACC-AGCCAAGGTATAGTGAATAATTTTTTTCAGTCTATCTCACATTAAAGTATAAGATTTCCTTGT------------------------GGGATTTAAAAAGCCACAAAAGTTTAAAAACATAAGAATTACTTCCACATTAAAAGATGAAACACAGCAGGATAGTACTGTAGGCCCAGGGAATGTCTTAGTCATTGAATTGAAATGGAATAC-TCCCCACAAGTGATTTTTAAAATGTCATAATCTTTCCAATATGAGGAACTGAACAGGCTTAGGGAGATCAAGGTAAAAACTAGTTTGGA-GGCTAAAAGGTGCAATCATCACAATTTGAACTTTTAATCTGAAAGACCTT-CAGTTTCCTCTCCCATTGGCTTCCACAGGATAGCTTAACTATAGGATTCACTTAATTCCAGCTCAATTATTTGAAGGTAGCTTGAAAGCACTATAAAGTAAAAGGGATCATTAGAGAAGCAAAG-AGATTTAGGCATTCAAAATCTTCCAATGCCAGCATCACAGATTGTAACTTTTCAGTACCTTTATGCTTCAAATATAAGC chr4 - 94230402 21324887 21324886 21325467 72904936 72904935 72905516 581 TAGCAACTCCTTATCTTCTGCACTTTCTTGCTTTTCATCCTAGCCAAGTTGT------TTATTTCCCTCTCACaaaataaaaataaaataaaatatatattttttaaataCTAAAGTATTAGTGCAAAGGAAAATAAAAAGGACTATAACCTTAAAAATATTACAATTACTCAAGCATAAAAAGGCTAGACACAGCCGGGTGATATTGCTATCCCAG----------AGCCAATGAACTGAAATGAAATGCATCCCTCCAGGTGCTTTGGAAGATGTCACAATCTCTTCAACATGATGAAGCTAACAGGCTTACAGAGATCAGGGTAAAAGCCAGTTAACAGGGTTAAAAGGTACAGTCATCACAGTTTGAACTTTTAACCTTGAAGAAGTTATGATTTTCTCTACTAATGGCTACCACAGGGACATTTGAATGCAGGTTTCACATTATTCAAGTTAAACTAGTGAAGAAAACCTTAAGGTCACTTGATAACAATAGGAGCCATTTTGCAAACTGAGCAAATTTAGGCATTCAGTGCCTTCTAATGCTAGTATCTGAGATCTGGAGTTTTAGAGATCTAAGTATTCCAGGTGAAAGC .....x:...:..:...:x::.xx:.:..x.....x:x..-.......x.:.------.x....:::..xxx.x.xx.x.x.x....:..x..x..x.x:..x.------------------------..:.xx.......xxx:.x..x:.......:..x.x.......:xx:...x.....::x.:.......x..:.::..:..:x:x.....----------..:..x....:.......:...:.-....:x..:...x...xx..:......:.....:.:...:....x...x:x..........x:.......:.......:.:....x:x.-..:........:..:........:.............:..x:....xx..-:::...:....x.:.x.....x.......:xx::..:.x.::...x.....x.x....x..:.x..:..x.x:.:::x.x...:.::x....xx.x.::..x...:::....xx:x..:.x:..-.:.............:x::....:.....:..:...xx....:xx:.x....x::x.:..xx:.::.:..::.:x.... 40M1I11M6D46M24I89M10D24M1I89M1I50M1I124M1I79M 364/552 65.9% 581/94230402 0.0% 45/552 8.2% 13593729 NA +3001 chr4 + 190214555 34926430 34926429 34926500 71 AACCTGCAGGTTTCACCATCAGCTTTTTCTTTTTTCTTTTTCTTTCTTTCTTCTTTTTTTTTTTTTTTTCG chr4 - 94230402 69900507 69900506 69900577 24329826 24329825 24329896 71 AACCTGCCTGCTATCCCTTGAGCTTTTTGTTTTCTTTGTTTAGTGCTTTCATCTTATTTTTTTTTTTCCTG .......xx.:.x:x..x.x........x....:.:.x...xx.x.....x....x...........:::. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% -34974077 -59256325 +3132 chr4 + 190214555 34927071 34927070 34927133 63 ATATATATATATATATATATATATATATATATACACACACACACACATATACACACACACATA chr4 - 94230402 8395808 8395807 8395870 85834533 85834532 85834595 63 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:..:...x..:....:...::x..:..xx.................:.x.....x.::x... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 26531263 NA +3062 chr4 + 190214555 34927073 34927072 34927147 75 ATATATATATATATATATATATATATATATACACACACACACACATATACACACACACATATACACATATATATA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..::.:..x...:.......:...:.:...:xxx::.:::.x.xxx:.......x...:..:............. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -19366081 -74864321 +3380 chr4 + 190214555 34927103 34927102 34927176 74 ACACACACACACACATATACACACACACATATACACATATATATACACATGTATATATATATGTGTGTGTATAT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x:..:::..::..............x.......:..x.x.:..::.....:.x.::..:..x:.:...:.:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% -36703029 -57527373 +3920 chr4 + 190214555 34927109 34927108 34927211 103 ACACACACATATACACACACACATATACACATATATATACACATGTATATATATATGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGACAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGAC-----CATATAAATGTA----TTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:.:.....:..:.:....x..-----..:...x..:..----.x..x.x:.:.::...........:.:.......:.:.x...........x...x.x... 22M5D12M4D60M 70/94 74.5% 94/94230402 0.0% 9/94 9.6% 1528329 NA +4155 chr4 + 190214555 34927117 34927116 34927213 97 ATATACACACACACATATACACATATATATACACATGTATATATATATGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGACAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCA---TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...........::.::.:.x..xx---....x.::.:.x..x.x:.:..:......:....:.:.......:.:.............x.x...x... 24M3D70M 68/94 72.3% 94/94230402 0.0% 3/94 3.2% 1528337 NA +5010 chr4 + 190214555 34927121 34927120 34927215 95 ACACACACACATATACACATATATATACACATGTATATATATATGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGACAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGAC-CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:.:........:::....x.:-:...:.x......x..x.x:....:....:.:....:.:.......:.x...................x... 22M1D72M 72/94 76.6% 94/94230402 0.0% 1/94 1.1% 1528341 NA +3579 chr4 + 190214555 34927453 34927452 34927621 169 CCTTCTCCACTATATATATATTATATAATATATATTACTT------------ATATATAATATATAATATATATAATATATATTACTTATATATAATATATAATATATATAATATATATTACTTATATAT-AATATAT-AATATATATAATATATAATATATAATATATATAATATATAATAT chr4 - 94230402 67910052 67910051 67910220 26320183 26320182 26320351 169 CCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATA----------AATTTAAGCTGATTAAATATCAACATTTGAATACATATA----AGAAAATATTTTATTAATGACACACTACAT ..:x...:.:..:.....:.x..:xx..x.....:..:.x------------......x:......:............:..x..:x..:..:.:.x...----------...x..x::.:x...x....-..:..x.-....:.....----.x..x....xx...xx..:.:.:.:x.:.. 40M12I48M10D20M1I7M1I10M4D30M 108/155 69.7% 169/94230402 0.0% 28/155 18.1% -32982599 -61247803 +3898 chr4 + 190214555 34927563 34927562 34927707 145 TTATATATAATATATAATATATATAATATATAATATATAATATATATAATATATAATATATATAATATATATAATTTATATATATAATTTATATATACATATATATAATTTTTATATATAAATTATATATACATATATAATTTAT chr4 - 94230402 67910061 67910060 67910204 26320199 26320198 26320342 144 TTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAA-TACATATAAGAAAATATTTTAT ...:.....xx...:x.x.x.....x...xx:...:......x.....x.:....xx:......xx....:..:.x....:..:.:.xx..x..x..x::xx..xx...x.:x.:..x.:..-..:.....x:x.x...x..... 122M1D22M 95/144 66.0% 144/94230402 0.0% 1/144 0.7% -32982498 -61247904 +3076 chr4 + 190214555 34927603 34927602 34927693 91 TATATATAATATATAATATATATAATATATATAATTTATATATATAATTTATATATACATATATATAATTTTTATATATAAATTATATATA chr4 - 94230402 9915087 9915086 9915177 84315226 84315225 84315316 91 TACAAATAAGCTATAATATATAGCTTATTTGTAATATATATATATTATTTGGGAAAGCCAATGGGTAAATTTCATGAATAAATAATAGGTA ..:.x....xx...........xxx...x.:....x.........x....:x:x.x:.xx..:x:...x...:..:x......x...x:.. 91M 62/91 68.1% 91/94230402 0.0% 0/91 0.0% 25012516 NA +10810 chr4 + 190214555 34943691 34943690 34944001 311 CCCATTTTCTCTGTCACTGTTTATATGAACAAT---------AAATTTTGTGAGACAACCTTTCCCAGGGATCAATTTGTATAAAAAGGAAACAAAAAGT-AAAATTTATATATATACATATATTCCTTTTTGCTTTTTTCCTCAACAGAGCTCACACAGCTTTATTTTATACTTTCCCCATCTGTTTG----GCTCAATTCTGGGCACTGGTATGTTTAAAGCAAGTGATAGTGTTTGCCCAACAGAAGTCTGTAGTCAACAACCTCATTTCTATTTCTGTCTTCTAGAACTGGGCCAGAGAGTTTTGCTTAAGATAAAAAGAC chr4 - 94230402 21343515 21343514 21343814 72886589 72886588 72886888 300 CTCTTTGTTTCAGCCTTTGTTCATGAGAACACCTGGCCTATGAAATTCAGTGACAGAACCTTCCCTGGGGTGCTGTTTTTGTAGGAAGATAACAAAACTTTAAAAAGTATATAT--------------------TTCTTGCCTCATTGGAGCTTACACAGCTTTATTTCAAACTTTTTCCATCTGTTTGCCTGGCTCAACTGTGGGTACCGATATGTTTAAAGCAAGCTATATTATTTGTCCAACAGAAGCTTGCAGTCAGCAGGCTTCATTCTATTTCTGGCTAACAGTA--GAGCCAAAAAGTTCCTCT---GGGAAGAAGAC .:.x..x.:..x.:.x:....:..:x.....x:---------.....:x....x.x......:..::...xx.x:...x.:..::...:x.......xx.-....xx.......--------------------..:..x.....x::.....:..............:.x.....::...........----......:.x....:..:.:...............:x...x.:....:..........::..:.....:..:x..:xx...........x..xx:..x.--.:....:.:....::x..---.:x..:..... 33M9I58M1I13M20D55M4I98M2D18M3D11M 209/286 73.1% 300/94230402 0.0% 39/286 13.6% 13600176 NA +3020 chr4 + 190214555 34970259 34970258 34970317 59 ATATACATATATATACATACATACATATATATACATATATACATACATACATATATATA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .....:.x.:.:.x.:.:........:.:x..:.x.:....x.:....:.......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 17449506 NA +3133 chr4 + 190214555 35000814 35000813 35000868 55 CTTGGATAGTTTGTTGTTGTTGTTGTTGTTTTCATTTATTTTTCTACTTTCATTT chr4 - 94230402 67832543 67832542 67832597 26397806 26397805 26397860 55 CTTTGGTTGTTCGTTTTTGTTGTTGTTGTTTTCCTTTTTTTTCCCCCCTCCATTT ...x.:.x...:...x.................x...x....:.:x.:.:..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -32831729 -61398673 +38151 chr4 + 190214555 35062945 35062944 35064159 1215 TGCAGCAGTATGTATGGAGTATCATGTAATTTGACCGTGTTGTATGATAAACCTTTAGGATGAATTATAGATTTAAAACGACTATCCATTCTATAATGGGTGAACCAAGTAATGTAAGAATGAATCCATAGTGACAATTTAAATTGGAATTCA--AGAAAAAGAACACTTTATTTGCTTCATAAAAACCTGTGAGGCATTGCTATTGAATAACGTAAGCAGAATGCAGTCATATAAATCTTCTTAATTTACATCTAGGGCTTTATTATGCATATTTGATAGCACTCTGAAGAACTTCAATTTACAGACTTTTGGAACTTTACCAATCCCAAAAGAAGTGCTAAACATGCCTGTTGGAACATTTAACTGAAGTAAGTCACTGGAGATTTTCTTAATGAGTGCAGAATTATCAGTTATTTGCATTCCTTGTAGATTTAAAGCTGTAGGGCCTATTAACAAGATAATGGCAAATGCATTTTGAATGCAGGTTTTTCTAAAACCATTCACTATCATGCACAATTCAGTATTATAAATTTTCAGGTATGCATTGAATTTGAGTTACCATTTGTTTACCTCATCTAAATAGATTATATGATAC-AAATGGTCACATTTTGAATAGTATGCCAATAAATCAACTTAAAGAAACACCAGAGATTGACTAGTGACTAAATCTTGAGTGTGAGCTGATCTTATCACATAGCACG-TTAATAACTGATTAGAGTTTACAAAGTAAAATGGTAAAATGGTAATTATTCCTATAAACGTGTGTTCAGAAAATCAAACTACTCCAATCTT-CTCTTCAATGACCAGTTATAACCATTTTTCATCTTTTTAGGAAGC-GTTCCTTTCAGAAAGTTTGGCATTAAATGTATGCACTGCACTTTTTAAAAACATAAGTGTTGTGCTTTATTCTTTTATCAACACTAA-----ATTATGATTCATAATTGGGAG---AGAAGCTGATC-------ATGTAAAATTATAAAACTGACATTTGGTGAAAGAGAAACATTTA--TCTGTGATTATTTTGTATTAGCTTTAGCTTCCGTC-TAACAGCTTAAATAATCTGCCTACCCATGTGTATAGTGGAATGATGAGTTTAATCTTAGACCACACACAATTGGGTAATTGATTTCCATTATGAAGCATATAATACATTTGCCACAGTAAAATAGTGGCAACTAAGTAAACCACTAAAATTAGGATGCATTAGATGCAGCCATACACCAT chr4 - 94230402 21384566 21384565 21385755 72844648 72844647 72845837 1190 TGTACTACTACAGATGGAGTACTTTG-GCTTCAGAAGTACCATGCAATAAAACTTTAGCATGATATATAGATTAAAAAGAGCAACTCAATCTTTAATGTGGGAACTAAGTAACATAACAATGAATCCATGGTGACTATTCAAAATGAATTTCATGAAAAAAAGAGCAGTTGAGATGCTTAATAAAAACCTGTGAAGCATTCAGACTGAATAACGTAAGCAGAATGCTCCAATATAAATCTTCTTAATTTACATCCAGGGCTTCATTATGCATATTTTATAGCACTCCACAGAACTTTAATTTACAGATTTTTGGAACTTTACCAACCCCAAAAGAAGTGCTAAACATGCCTGTTGGAACATTTAACCAAAGTAAGTCACCAGAGATTTCCTTAATGAGTGCAGAATTATCATTTATTTGCATTCTTAGTAGATTTAAAACAGTAAGGCCTATTAACAAGATAATGGTAAATGCTGTTTGAATGTTAGTCTTCAGCAAACTATTCACTAAAATGAATAACTCAACG-TACAAATTTCATAGTATGTAACTACATTGAGCAAGCATTTGCTCTGCTCATTTAAATAAGTAATTTGACTCAAAATGGCTAGTTACTGAACAATGTGCAGTTGAACAGATTCAGTCAAATTAC-----TTCAGTAAAAACT--GTCGTCCTTGTCAACT----TTCTCTGATAATATTCTTAAATATTGAGCAGCATGTACAAAAAGAAATAGAAACTTG----------------ACATAAGCTCAG--AATAGAACTAAGAAAATTTTGCTGGTGAAAGCACAATT-CATGCATTTTAATTATTTTAACAAAGCTGTTCATTTAAAAAAAATGCAGACTAACTG--TGCATTACACT--------ACAGATTGGAAATGCTTGGTCTTCATTTCAGCTCTGGAAGCTATAGTGATTTTTTTTTAAGGGCCCAGAAAAAGGACAAATTTGATTTAAAAACACAAATGTGACATCTGTTGATCGGACAAGAGTTACTTCTATGACAGTAT----GCAATTCCAGTACCCTTCTTAGTGAAATAAACAACCATCCCAATCATGCATGCATTGGAGTGACTAGCGT-GTCTCATGCCACAGATGGCTGCACAACTGATTTCCATTATGAGCTGTAGAATGCATTTATCATAGAAAAAGAGCAGTTGCCTAATAAACTACTAAAATTAGATTGAATTGGA--CAGCATTATATTAT ..:.x:.x..::x........::x..-:x..:::xx..::::.:::.....x......x....xx........x....x::.x.::..x...x.....x.x....:......::...x...........:.....x...:...x..:.x....--.:.......:..x..x.xx.....x..............:.....xxx.:.....................xx:x........................:.......:.............x.........::x.......:..........:.................:........................................::...........::.......:......................x............:.x...........:.x...:.....................:......xx........:x:..:..:xxx....:........xx...x.:..:...:::-..:......:xx:.....:.x:x.xx.....:x.x......:.:xx.....:......::.x..x...:x.-......::.xx.x:....:.:.:...x:x.:..:x:.:.:.:xx...:xx.-----..x.x..:x:...--:..x.xxx...x.:..----..x..xx...::.:x-....xx.:...x:..x:.x......:x:....:.x..xx..----------------..:.:x.:....--...x:.....xxxx...:..-..xx.x..x.xx..:..-:.xx......xxx.x....x.x:....-....x...x.:...:x.xx:x.:...x..--....:.:....--------...x.xxx.xx:.....x:.::.:x.x...:.x..::-----..x:.....:x.xx..::.:.---....:xx.:x.-------..x.....x:.:...xx......:..x...xx.::x..x.x...--...:...:x:.x.----x:.::.::..:x:..x..-..::::xx....:..:.xx..:.x:....::.::.x....:...:x..:x.-:...:.x:.....x.::::..x::..:...............:x::..x...:.....::..:..x....x..::.:x:.:x.:.....:...........:x..x...:..--....xx..:.::.. 26M1D126M2I370M1D71M1I51M5D13M2D16M4D15M1I41M16D12M2D20M1I17M1D27M1I29M2D11M8D37M5I21M3I11M7I44M2I13M4D18M1I51M1D112M2D14M 810/1166 69.5% 1190/94230402 0.0% 73/1166 6.3% 13678379 NA +3019 chr4 + 190214555 35128525 35128524 35128572 48 AAAAACAAACAAACAAACAAAACAAAACAAAAAGAACACTACAAAAAT chr4 - 94230402 64558421 64558420 64558468 29671935 29671934 29671982 48 AAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAAT ......................x.....x....x..xxx..:...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -29429896 -64800506 +9529 chr4 + 190214555 35161852 35161851 35162451 600 ATATTTTTGAATTTCTT------AATAAGCCTAAATACAACAAATGTGATTACAGTTTTTAGTTA-TAAGTCAACTATAAGATTAAAACAATTTAACATACAATAAATGGTTCTTGGGCTATACCTTTTGTGTATTACCTACAATGCCTAACTAATCCCCCTGCCAAATAATGTAAACTAGAATTTTACAGTTGCTAAGATTCAGAGAATCTTAGCAATAACTGTGCTTTTAAAAGCCATGTAAAATAAGGGAATAAAGTTAAAAGAAAAAATTCAGAGCCAAG---------TAATTATTCCAGTCAATTAATTTGTATATATCAAATGCATGAATTATCTGCTAATGAAATTCTCTTCATTACACCCACCATTAGAATTTTCTTTAATCCTAAAGGGCACTAGTCCAATACTCTTTTCTATCTGCATTCTTTTACACAATCTCCCCATGTCATGCCTAGAAGGTCACTAAGTTAATTGGCTGTTGAGTACTTAAAGTAGTTAATTCCATCTTATAAGTTATCTGATTTTCAATTTAAAAGTTCTTTAGTCAAGGTTACAAGAT--TAGCATAACCTCAAATCAAGAACATGTTTCTGGGCACGGCACTGCTTCACT chr4 - 94230402 21414755 21414754 21415312 72815091 72815090 72815648 558 ACATATTTGAATAATTTTATAAAAATCAACATAAATATAACTAATGCAATTGCTATATTCAGATAAGAAGTCAACCCTT-GAAAAAAAAAATCAAAGATA----------TTCTTGGGCTGAGCTTAGCAAG-ATGATCTTC----TCTGATTAATTGCACT------TAATATTAAG-----------ACCTGCTC---TTCAGGAAGTTATAGCAA--ACTGA------ATAGACCACGTGTGATTAAAGAACAAGCAGAGAAGACA----CCATAAGAAAGATGATCTTTTAATTACTCCAGTCAATTAATTGGTAAAAATCAAATGCTGGAATTATCT---ATTTAAACTTTCTTCATTCTATCTGCAATTAGA---TACTTTAAATCAGAATATGGTTAACTAAATGCAGCATTCTGTGTCTGCCTTTTCATGGAAGTCAAGCACATCATGATTCTAAGGTCACAAAGTCAATTTTCTATCGAGTACTTAAAACAGGTTACTGTGGTTTACAAATTATCCACTGTAATAGCATGAAGTTCTTTGGTCAAGGTTATAGGATAAAAGCATGTCTTAATGTGAGGAAAATACTACTGCTC------CTGCTTCACT .:..x.......xx:..------...x.:.x......:...x....::...:.x:.x..:..x..-x........:x.x-..xx....x...:x..x...----------..........:x:.:.xx::x.-..x.:..x.----:..:.:....:x.x..------....:.x..x-----------.x:....x---.....::.:.:x......--....x------.x.::...:..:x:..x.::...:..:xxx.:....x.----:..x.:xx...---------......:...............x...x.x.........xx.........---.x.x...:.:........x:.:.::.x......---.x......x:.x:..x:xx::..:::x...:.xx:x....:.x.x:::::...:.::x..x::xxx..::.....x:.xx........x....:....xx..:.:...........::..x.x.:.x::x:...:..:.....::x.x.xxx.x:xx:.........:..........:.:...--x.....:x.:.x.x:.x.:...x..::.x...xx.------.......... 17M6I42M1I13M1D20M10D22M1D9M4D16M6D10M11D8M3D18M2D5M6D38M4D11M9I49M3D33M3D184M2I35M6D10M 352/540 65.2% 558/94230402 0.0% 78/540 14.4% 13747097 NA +3300 chr4 + 190214555 35189679 35189678 35189761 83 CTTTCAGAAACAAAAAGGGAACTAACAAGAAGCATAGGAAAAAAGAAATAAGGAAAGCAGAATGAGAATAAAGAAAAAAAGAC chr4 - 94230402 3442075 3442074 3442155 90788248 90788247 90788328 81 CTTTCAAAAC--AAAGGGGAACAAACAAGCCTTATAGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAAAAGGC ......:..x--...:......x......xxx:............:..x.......:x::..x:.:..x.:..:xx.....:. 10M2D71M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 31747604 NA +3208 chr4 + 190214555 35199238 35199237 35199283 46 GTGTGTATACATATACTTATATGTATACACATACATATGTGTTGTG chr4 - 94230402 65311256 65311255 65311301 28919102 28919101 28919147 46 GTGTGTATGCATATATTTATATATACACACATATATATGGACTGTG ........:......:......:..:.......:.....x::.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -30112018 -64118384 +3121 chr4 + 190214555 35200742 35200741 35200778 37 TTTTTTTTTCTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 - 94230402 16400271 16400270 16400307 77830096 77830095 77830132 37 TTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTG ........:...........x................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 18800471 NA +3059 chr4 + 190214555 35202142 35202141 35202220 79 TATGTATAAAATATATATAAATATATAAAAATATAAATATATATAAATATACATAAATATATAAATATACATATAAATA chr4 - 94230402 88029562 88029561 88029640 6200763 6200762 6200841 79 TATGAAGAAGTTGTGGACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATA ....x.x..:x.:.:x.:.:x.....xx.x:.:.:..x...:.:...:...........:.:.x....:..:.x..... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% -52827420 -41402982 +3122 chr4 + 190214555 35202762 35202761 35202822 61 TATGAATATATAAATATATATAAATATATGAATATAAAAATATATGAGTATATAAATATAT chr4 - 94230402 27821919 27821918 27821979 66408424 66408423 66408484 61 TATAAATATGTGAATACATAAAAATAAAAGCATACAAAAATATATAGGTCTATATATCTGT ...:.....:.:....:...x.....x.x.x...:..........::..x....x..x.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 7380843 NA +3231 chr4 + 190214555 35202956 35202955 35203045 90 TATATACATAAATATATATAAATATATGTATAAATATATTTACATATATAAATATATAAATATATGTATGAATATATGTAAATATATATA chr4 - 94230402 12802786 12802785 12802871 81427532 81427531 81427617 86 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCT----GCACATGCAAATACATATA .......x:.xxx...:........:..:..:.......:..x:......x:...xx...x.xx.x.----::.:...:.....:..... 67M4D19M 61/86 70.9% 86/94230402 0.0% 4/86 4.7% 22400170 NA +3441 chr4 + 190214555 35202985 35202984 35203079 95 ATAAATATATT-TACATATATAAATATATAAATATATGTATGAATATATGTAAATATATATAAATATATATAAA----TATATATGTAAATATATGTATA chr4 - 94230402 12802776 12802775 12802873 81427530 81427529 81427627 98 ATAAAGTCATTATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATAC--GTATTGAAAAAGCTCTGCACATGCAAATACATATATA .....xx:...-..:.:x:..x....:........:..:..........x...:......:--:...xx.x...----.::.:...:.....:..:.... 11M1I49M2D11M4I22M 69/93 74.2% 98/94230402 0.0% 7/93 7.5% 22400209 NA +3022 chr4 + 190214555 35203554 35203553 35203657 104 TATAAACGTATATAAATACATATAAATATATATAAATACATATAAATATATATAAATACATATAAATATATATACAAATATATATAAATATATATACACACACA chr4 - 94230402 70767719 70767718 70767822 23462581 23462580 23462684 104 TACAAACATTTATAAATGCATCAAGGAAAATGTCTGGAAATGTAGCCTTTAACATACACTTATGAAAACATATACATGTATTTATAAAAATGTACTCACCCACA ..:....:.x.......:...xx.::x.x..:.xx:x.x..:..:x:x.xx.:.x.:..x...:..x.:.......x:...x......x..:..:x...x.... 104M 66/104 63.5% 104/94230402 0.0% 0/104 0.0% -35564165 -58666237 +3080 chr4 + 190214555 35203618 35203617 35203688 71 AATATATATACAAATATATATAAATATATATACACACACATATATGTATATATATGTGTAAAGAGGAGTTT chr4 - 94230402 38535894 38535893 38535964 55694439 55694438 55694509 71 AATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCT ........:...x:..:..:x:....:.:.........::.:.......::...::x.x.x..::.x:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -3332276 -90898126 +15431 chr4 + 190214555 35213873 35213872 35214229 357 AATAGTAATTGGTTACTCTTGGATTTTTTAGGCTATTAGCCATATATTCCACTCACGTAAAGATTAACTTCCTAGAAAATTCTATCT-ATGACAAAATGCCATTAACTCCTGATCGTCATAAACACATTAAATAACAACCATTGATGCTGCCTTGACAGCTCTGAAGAATTTGTATGCAGTTTTAATGATGGAGAACCTCACTCATCATAATTTTT-GAGTGTCGAATTGATTCTTGGAAGAGAAGCTGATAATTTGATTGTTCTGTAATGTGCTAGCACATAATTTCAGAAAGAGAAATCACTTTATGAAAAAACTAATTACATGCAAATG-AGTCTCTTCACAAGCTGTTAATAAAAT chr4 - 94230402 21437135 21437134 21437479 72792924 72792923 72793268 345 AATACTGCTTGCTTACACTTAAGTTTTTTCTTTTTTT-----TAAATCACA---ACGTGG----TAGCTTCCTTGAAAATCCCATTTTACCACACAATCCCATTAACTCCTGCTAGTCATAAACAGATTAAATAACAGCCCATGACATT---TTGACAGTGCTGAAGAATTTGTAGGCAATTTTAATGATGGGAAACCTACCTCATCACACTTCTCAGAGTTCTGAATTGATCTTTGGCAGTGAGGCTGATAATTTGATGGTTCGGTAATGTACAAATGCATAATTTCAAAACCAGAAATCATTTTACAGAGAAACTAATTAAATGCAAATGAAGTCCTCGTACAAGATGTTAATGCAGT ....x.:x...x....x...:::......xxx:.x..-----..x..:x..---....::----..:......x......:.:..:.-.:x...x...x.............x.x..........x...........:..xx...:::.---.......:x..............x...:............::.....xx.......:.x..:.:-....x::........::....x..x..:..............x....x.......:.x.:::..........:..xx........:....:::.:..........x.........-....:::x:.....x.......:x.:. 37M5D9M3D6M4D23M1I61M3D64M1I115M1I27M 261/342 76.3% 345/94230402 0.0% 18/342 5.3% 13776738 NA +40479 chr4 + 190214555 35216400 35216399 35217110 711 TTTTTATTTGCTT--------TTTTTTAAAT---CGAATGTCCTGGCTAAGCATCCTATTTAGATTTGCTTATACAGCTAACTACCACTGTGCATAACTTCCAGAATGGGAAATTAGCCTGGCTAATTTAACCACCAGGATTCTAGTCTAATCCTGTTGATGTATTCCTGATAATTAACAATCTGTGAGCAGCTGCATTGTCCAATATCCAA-TATACAGCACAAGGAAAATGATCATTTGTACATTGTGGGTTTAGTGGACTAAATGAAAGAGGGTTTTCTTATTAATAGCTGCACTTTTCATAAATTTTATGAGTTAATAGGGTTCAATTAATGTTGCCAAGTGGTGTGCTTCATACATATGTCTCTGGGGCTTTGCGAAGTTGAGAAGAATGTGTAATGAATGGTTGAGCAGTTATATTGGTACCCTAGTAATTAGACAACGGGTAATTAATGTGCATCTGTGTTAGGCTCCTGGGTACTGTCAACGACCCTGTAGCGT-GCAAAAAATAGAAATTATGAGTTTGGCAAGGGAATACAGCTTTTCTCTTTTTCTTAAATTTTAGATCTACATCTGTGTTTAATTAGAAGAAGAAATGAATTCCCATTAACACCATTAGGAAACATGCTATGATTGGTTAAAGCCTACATGGACTGTGAAACTGATCAAGAAAGCCCAGGAGATCATAATGGATTTTTTTCATCTTAGAAGGCCTTTTATTA chr4 - 94230402 21440404 21440403 21441110 72789293 72789292 72789999 707 TTTTTATTTATTTAACAGAACTCTTGTTAATATCCTAACTTTCTTGATAGTCATTTTACTTAGATTTGCTTACACAGATAACCATCTCTGTGCAGGCCTT--GAAAGAGGGAATTTTACTGG-TAATTTAATAGCCAAGACTTTTCTTTAATCCTGTTAATGTGTGCCCAATATTTAACAATCTGTGAACAGCTGTGTTGTTGAATATCTAAGCAGACTGCACCA--AAAATGATCATTTGCATGTTGTGGGCTTAGTGGACAAAATGAAAAAGGATTTT-TTATCAATAGTTACACTTTTTGTACATCTTATGAGTTAATAGGGTTCAATTAACATTGCCAAGTTGTGTGCTTCTTGCACATGTCTCTGGGGTTTTGCGAAGTTGAGAAGAAAGCTTAATGAATGGTTGAACAGTTATACTGGTACCCTAGTAATTACAGAACAGGTAATTAATGTGCATCTGTGGCAGACTCTGGGGTACTGTCAACGACCCTGCAGTGTGGTAGAAAAAGGAAATTATGAGCTTGGCAAGGGAATACAGCTTTCCTTATTTTCTTAAATTTTAGATCTACATCTGTGTTTAATTAGAAGAAGAAATGAATTACCATTAAAACTATTAGGCAACAAGCTATGATTGGTTAAGTCCCACATGGACTTTGAAACCGAT---GAAAATTCAAGAGAACAGATGATATTTATTTTGT--------GCtttttatta .........::..--------.:..x.x...---.x..:x.:..x.x..:x...::..:.............:....x....:.:.x.......x:x...--::..x:..:....xxx....-........:x:...:..:.:.xx.:..........:....:.x..::...x..............:......::....:x......:..-:.x..x....x.--..............:.::.......:.........x........:...:....-....:.....:.:.......::..x..:.........................::.........x.........x.:..:............:...................x.:x..............:........:.................x.x...:.....................x:..:...:x....................:..:..-.:.:....x:...........:.....................:..:x.....................................................x.......x..:......x....x...............:x..:.........x......:...---....:::..:....x..x.xx:x....x...::.--------..:........ 13M8I10M3I66M2D20M1D89M1I12M2D53M1D221M1I165M3D34M8D11M 569/694 82.0% 707/94230402 0.0% 30/694 4.3% 13775996 NA +13102 chr4 + 190214555 35217145 35217144 35217650 506 TGGTAGTCTGCAGAATAGTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGTCCCTTT-----------TTAAAATTTGGCCACATTCTA-------------------AAACTATGTGTGATTTAAACAAAAATCTACTGAACAAATGCT-ACTCACCACACCCACAACTGAATTTTCT----CTCTCAGTGAGTTGCAATAA-TATCACCTTTGTAATAGGCTTAATATGCAAAAATGTCACATATATTAATGACAGTGTAAAATCGTTTACTAAAAGATAATAGTCATGAATGTTATAGATAACTAGCTGTGCTGATGCTCTAGTTTCCAGAGAGAATCAAATTAAATTGCTTTTATCTCCTGAAGCAGAATAACATTTCATATTCCACATGACAAT-AAAATGTATCCTTAGGGCAAGTAGTATGTCTGTACTTTTAAAATGAAATAGGCATGATTTAATTAGTATGCAAGAACATAGGCCTCAATTTTGAAAGAA-AGATGACTCTCCTGAGTGTTCTTGTTCA chr4 - 94230402 21441687 21441686 21442210 72788193 72788192 72788716 524 tggtaattagta-agtgatctctgtatctttacctcaaccttccttttttcccctttttttccccatcctgctGAGTGACTGAGTGGGAATCTG--CATCTGCTATCCAGTGCTAACCCACAACAAGATGTTAGTGTTTTAAA------TCCATTGAGGAAAAGTTCATTCACAAGAGCTACAGTTTAGTGTTATTTAACTTTGGAAGAAATACAGGAAGCATCCTCCGTCTGAAACATCTAATAGGTAAAAATCTCACACAAATTAATAATACAGAAGAAT-GCTTATTGAAAGATAGCCATTGCAGATGCTACAGATGACTAGGTAAGCTGATGCACTAGTTTCTAGAGGGACTCAGATGAAATTGCTTTTATCTCCTGAAGCAAAGTAATATTCCATACATCACATGATGATAAAAATGCATCCTCGGGGTACATA------CAGTACTTCTAAAACAAA----TCACAATCCAATTAGTATGCATGAGGGAAGGACTGTATTTTAAGGGAACAAGTAACTCACCTGAGCCTACTGTTTTA .....:.:x.:.-.:.::.:...x.x...:.x:...xx:..::..:.:.::.:..:.:.:....::...:x:.-----------.x::...:..--..:x.x...-------------------..:x.:.xx...x......------..:.:...:x...x.:.-.:....x.x.x.:...::.x.:.x..x.----..:.x::x..:x.:..:x..-:...x:.:x.x.:.x.x:::.....x.:......x.....:.x......:.:.xx.x.:...-.:...:.:.......::x:.:::::...:..:....:.....x.:x........x........:....:..x...:..x........................:.:...:...:....:x:.......::..-......:.....::...:.x:..------.x......:.....::..----x..::..::............x..:x:x...x..xx.....:.::...-.::.:....x......:x.x..xx..:. 12M1D60M11I10M2D9M19I19M6D17M1I28M4I20M1I62M1D132M1I23M6D18M4D48M1I28M 323/486 66.5% 524/94230402 0.0% 58/486 11.9% 13775458 NA +3321 chr4 + 190214555 35233911 35233910 35233965 55 CAACAAGCATATATATATACACATATATACATATATATACATATATACATATATA chr4 - 94230402 25493127 25493126 25493181 68737222 68737221 68737276 55 CAAACAGCATATTTATTTACCCATACATACATATATGTACATATACAGGTATATA ...xx.......x...x...x....:..........:........:.x:...... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 9740784 NA +3478 chr4 + 190214555 35233941 35233940 35233992 52 ATATATATACATATATACATATATATATGTATATATATATGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704325 74526078 74526077 74526129 52 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ..x..x............:.......x...:...:.x:.............. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 15529667 NA +3161 chr4 + 190214555 35237313 35237312 35237386 74 AATTTGGATCACACATATATGCACACACACACACACACACACACACACACACACACTTGTGCT----TTTAATTATTT chr4 - 94230402 21908461 21908460 21908538 72321865 72321864 72321942 78 AATGTAGATCAGATATATATGTATACACACACACACACACATTAACACAGCACTATTCTTACTAAAGTTTCATTATTT ...x.:.....x.:.......:.:.................:xx.....xxxx:.:.:x.:..----...x....... 63M4I11M 55/74 74.3% 78/94230402 0.0% 4/74 5.4% 13328852 NA +3108 chr4 + 190214555 35252660 35252659 35252717 58 ACATATGTAAATATTTTGTAATATATATATATATATATATACACACAGACACACACAA chr4 - 94230402 10898934 10898933 10898991 83331412 83331411 83331469 58 ACAAACGTAAAGCTTCTATTTTATGTGTGTATATATATATACACATATACACACATAA ...x.:.....xx..:.:.xx...:.:.:................:.x.......:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 24353726 NA +3305 chr4 + 190214555 35264623 35264622 35264681 59 CTGTCTCAAAAAAAGAAAAAAAA--AAACA-AAAACAAAAACAAACAAACAAACAAAAAACT chr4 - 94230402 11261208 11261207 11261269 82969134 82969133 82969195 62 CTAGCACAAAAGGGGGAAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAGGCT ..:x.x.....:::.:.......--.....-...........................::.. 23M2I5M1I31M 50/59 84.7% 62/94230402 0.0% 3/59 5.1% 24003415 NA +3607 chr4 + 190214555 35265749 35265748 35265822 74 CTGCAACCTCTGACCCCCGAGTTCAAGCAATTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx::.::.:.:.......::x...x:xx.x.........:...........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 17068623 NA +3095 chr4 + 190214555 35269741 35269740 35269835 95 CTAGGAAAGGATAGTTAGTTTCCTTCCTTCCTTCCTTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTT chr4 - 94230402 44322002 44322001 44322096 49908307 49908306 49908401 95 CTGTGAAGAAACAGTAACCTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTT ..:x...:::.:...x.x:..:.:....xx:..xx::...x:...x::.:x:..x:..x:::.:..:......x..............:.:.... 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% -9052261 -85178141 +3266 chr4 + 190214555 35269747 35269746 35269846 100 AAGGATAGTTAGTTTCC-------TTCCTTCCTTCCT---------TTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTC chr4 - 94230402 35294566 35294565 35294681 58935722 58935721 58935837 116 AAGGAGAGTCAATTCCTGCACAATTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC .....x...:.:..:.:-------.....:::..:.:---------.....::...:...x.......x:....:..::::...x..:..:...xx.:x..x...::.....x... 17M7I13M9I70M 68/100 68.0% 116/94230402 0.0% 16/100 16.0% -24819 -94205583 +3620 chr4 + 190214555 35269751 35269750 35269899 149 ATAGTTAGTTTCCTTCCTTCCTTCCTTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCT--------TTCTTTCTTT---TTTTCTCTTTCTTTCTCTTTCTTTCTCTCT-CTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTT chr4 - 94230402 45185585 45185584 45185743 49044660 49044659 49044818 159 ATTGCTCATTTTCCCTCTTCCT-AGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTC-TTATTCTTTTCTCTTT ..x.:.x:...:.:::......-xx.:.:xx:.....x:...x..........::...:x...:.--------..........---.:...:......:x..:xx.x:.....x..-...x.......xx.:x:.::.xx.:..-..x..::......... 22M1D42M8I10M3I30M1I27M1D16M 100/147 68.0% 159/94230402 0.0% 14/147 9.5% -9915834 -84314568 +3164 chr4 + 190214555 35269760 35269759 35269835 76 TTCCTTCCTTCCTTCCTTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCT----TTCTTTTTTTCTCTTT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .:....x:x.::.x.:..:...xx.:..x...:..........:............x...----...:.x...:..x.:. 60M4I16M 55/76 72.4% 80/94230402 0.0% 4/76 5.3% 16280943 NA +3826 chr4 + 190214555 35269764 35269763 35269919 156 TTCCTTCCTTCCTTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTT-TTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTT---TCTCTT-TTTTTCTCTCTTTCTTTCTTT chr4 - 94230402 45185594 45185593 45185751 49044652 49044651 49044809 158 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTT-CATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTT-TCTCACTTAGTGCTTCTCAC-TACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..:.:::......xx....xx.:..:.x...-.x...........::..:x...:.:x.:...:....:.:.:.xx.....:.:..-....x...-x.x:.....x.-.x...x.......xx.:x:.::---......-..:..:.......xx.::... 31M1D54M1D8M1I11M1D22M3I6M1I21M 105/153 68.6% 158/94230402 0.0% 8/153 5.2% -9915830 -84314572 +3806 chr4 + 190214555 35269767 35269766 35269928 162 CTTCCTTCCTTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCT-TTTCTTTCTTTCTTTCTTTCT-----CTTTTTTTCTCTCTTTCTTTCTTTCTTCCCCTT chr4 - 94230402 45185582 45185581 45185749 49044654 49044653 49044821 168 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTT ...x:.x.::x..:..::....::.xx.:::xx:.....x:...x..........::...:x.:.:.:x.:..:::.:.:.:.:.xx.....::.......x...xx.-:....:x..x::.x.......-----.:::.xx.....:x......::.::..xx:... 108M1I21M5I33M 96/162 59.3% 168/94230402 0.0% 6/162 3.7% -9915815 -84314587 +3323 chr4 + 190214555 35269771 35269770 35269855 85 CTTCCTTTTCTCTT-TCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTT--CTCTTTCTTTCTCTCT chr4 - 94230402 18988809 18988808 18988896 75241507 75241506 75241594 88 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ....x..x..:...-.x....x......:.xx.:..x...:..........:......:.:...x...x.--:..:.x:..:..x... 14M1I55M2I16M 63/85 74.1% 88/94230402 0.0% 3/85 3.5% 16280962 NA +3775 chr4 + 190214555 35269777 35269776 35269928 152 TTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCT--TTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTC-------------TTTCTTTCTTTCTTCCCCTT chr4 - 94230402 45185586 45185585 45185743 49044660 49044659 49044817 158 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTT---------CTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x...x..:.:::....:..xx::.:xx......--...x...........---------.....x:...::x:..:...::.......xx.....:.:.....:x...xx.x::.:..x..x:..x...:..-------------.:....x:.:.:...:.:.. 35M2I15M9D73M13I20M 95/143 66.4% 158/94230402 0.0% 24/143 16.8% -9915809 -84314593 +3554 chr4 + 190214555 35269778 35269777 35269909 132 TTCTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCT-TCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:.:...:....:...:x.:....x........::x.x::x.xxx......:xxx:.:.xx.x:....x::..-...:.x..x.x.:..xxxx.x.....:..:......x......:.x.....:.:... 74M1D57M 83/131 63.4% 131/94230402 0.0% 1/131 0.8% -4948902 -89281500 +3048 chr4 + 190214555 35269786 35269785 35269863 78 CTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTT chr4 - 94230402 8141247 8141246 8141320 86089083 86089082 86089156 74 CCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTT----TTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .:...x..x...:........x...x...:::..x........----...:...::.:.x.x:.:.:..:...:..:. 43M4D31M 52/74 70.3% 74/94230402 0.0% 4/74 5.4% 27128539 NA +3136 chr4 + 190214555 35269790 35269789 35269871 82 TTCTTTCTTTCTT-TCTTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTT chr4 - 94230402 18988810 18988809 18988892 75241511 75241510 75241593 83 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT ...x..x.::...-.x....x......:.xx.:..x.....:........:..:.........x...x.xx.:::.x.:..:. 13M1I69M 58/82 70.7% 83/94230402 0.0% 1/82 1.2% 16280980 NA +3861 chr4 + 190214555 35269801 35269800 35269929 129 TTTCTTTTTCTTTCTTTCTTTCTTTTT-TTCTCTTTCTTTCTCTTTCTTTCTCTCTCTTTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTTCTTTCTTTCTTCCCCTTC chr4 - 94230402 51102255 51102254 51102384 43128019 43128018 43128148 130 TTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTTTTTATCTATTCATATCTGTTTTCTTTGCCCATC .......x....:::...:x...x:::-....xx..x.....:....:.x......:.x..xx....:x:..:..:....:::..:..::x.x:..:...x.:.x.::x.x...x.:..::..x...x.. 27M1I102M 81/129 62.8% 130/94230402 0.0% 1/129 0.8% -15832454 -78397948 +3049 chr4 + 190214555 35269865 35269864 35269945 81 CTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCTCTCTTTCTTTCTTTCTTCCCCTTCCTTCCCCTCCCTCCCT chr4 - 94230402 8141240 8141239 8141320 86089083 86089082 86089163 81 CCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .::..:x:....x..x...:........x:..x..::::..x.....:...:...:.....:x:x...:::.:.::::... 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 27128625 NA +3023 chr4 + 190214555 35269898 35269897 35269944 47 TTTTTTCTCTCTTTCTTTCTTTCTTCCCCTTCCTTCCCCTCCCTCCC chr4 - 94230402 69531370 69531369 69531416 24698987 24698986 24699033 47 TCTTTTCTTTTTTTCTTTCTTTCTCCCCCCCCCCGCCCTCCCCCCCC .:......:.:.............:....::..:x...::...:... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% -34261472 -59968930 +10842 chr4 + 190214555 35281520 35281519 35282013 494 TTTAGCAATGTTATATTCCTTAGGAGTAGTTTGGTTTATTTCCTTTTTTTTTTTTTTTTTGGACAGCTTGTGTCAAAAATTAATTCTGATTTCAAACAGATGAAATTT--CCTCCTATCCAGTGTCTTGAACTA---TCCCAAGACCTGCAATAGGCAAGATTCAACTAACTCTTCCTTCTGATGATTCTTGTCTTAAACATTTCAAACAA------CAAAGTTCCCT--CCTGAGAAAATTATGTTCAGTCACTATCACCTTTAAGTGAAAAGA-TTTGGCTTCAAATGTTCTAGGATTTTTTTTCTTCTTTGTGAACAGTAGATTATTATTCTTTGTACTAAATTAATGTCTGAGCAAAGTGAATGTCAGAAATTTGGCCCATGCAAAATTCCATTTTCTTGTCAGTATATA-CCAGGT------------CTTTTTGGCAGAAACTGAAAGGAATAGCAAGCCACTTTGAATAAAATGTGCTGTAACAACCAAAGGGAAACACCAACACATTAATTTT chr4 - 94230402 21450317 21450316 21450792 72779611 72779610 72780086 476 TTTGGATGTAATACACTCCTTAGGGACAAGTT-------CTACTACTTTCCTGCTTTTCTTGACACCTAGTGTCAGAAAATGATGCTGGCTGAAAACAGATGGTGTTTTTCCTCTTATGCAATGTCCATAACTAAAATGCCCAGA----------GTATGTTGCAGTTAACTCTTACTTCAGATGTCACTTTTCCCTGCAGCCTACAGTAATCCTACCCAATTTCTCTTTCCAGAGAAAATTATATTCAGTTGTTACAACCTTTAAGTAAGAAGAATTTGGCAGTACAT-------------TTAGCTTCACTGTGGTGTGCAAATTATTTCCCATTGT-------TAATGGCTGAAGAAAATTAATGTTAGAAGTTTGGCCTCAAATATATTCTCTTGCTTTTCCAGTATCTATCCAGGTATGTGTTTTTTTCTTTCTGCCA--------AGGGAATAGTAATCCACTTTGAATACAAAGTGTTGTGTTAATTCAAAAGAGCCCAGAAAACACTGATTTT ...:.xx:.:x..:.:........:::.:x..-------:.x..x:...::.x:....:.x....x..x......:...x.:..x...::.xx.........:x:...--....:...x..:....:xx.....---.x..x...----------.:.x.x.x..::........x....x....x:x...x..::x:xx:::.xx.::..------.x..x...:..--..x...........:......:::..:x..........:.:....-......xx:.x..-------------..xx....x:....:xxx.:.:......x::.x....-------.....x....:x...:.x.....:....:.......:xx:xx.x....:x..x::..x:......x..-......------------....:..x..--------.:.......:..x............x..x...:...:x:..::x..::..:x.xxx..x...:.:..... 32M7D69M2I24M3I8M10D56M6I11M2I45M1I13M13D37M7D68M1I6M12I10M8D70M 304/449 67.7% 476/94230402 0.0% 72/449 16.0% 13831203 NA +13960 chr4 + 190214555 35290727 35290726 35291214 488 TTTTTTCACCTT--------GTCTGCTTCTCCCTTCTTTAAAAGACAGTACTCCACAGTCAAACCCCAATGGATGTATT-ATGAAACTGTAATTTTTGATGGATGTTCCAATGTGGGAGCAA---AACTTGTCATTGTGTTATATAATGTATGCACATTTTCTTTTCCATCATTTCTTCTTTGAAATTCAA-AAAGTACTTCAGATATTATGATGTTTCCAAACTGTCCTCAGAGATCGCCATGCTTATTGTCAATTGTTTCTGAAAAGGGAAAAGGAAACTCAAAGTGGAAAAGCTTTGCCAGCTTAGTGC-------TTTTATATTGTCTTCTATGTAGCAGAACA-TTAAATCTATCATTTCTAAGACTGTTCTGAGAATCTCATAATTGCAGCACTTAGATTTAAGAGACATAATTTATCATCATTCTGTTTGCAATTGCTGTAGTATTTCAGTCAAATTCAAAAGTACTTTTCTAATTTTATTTCTGAAGGTTATATTGACCTT chr4 - 94230402 21459196 21459195 21459677 72770726 72770725 72771207 482 TTTTTTCACCTTTCATGCAAGTCTGCTGTTATCTTC----------AGTAGTCCTT-GTCCAATTCCACTCATAATGCTGACAAGACTATTATATT-GACTGATGTTTGATTTTGATAGCAACCCACTGTATCGTTTTATTACCAAAAATCTGCACGTTTTATTTCCTCTCATTTCTCTAGCGATGTTCACTAGCTTATTTCAGATGCCACAGTGTTTTAAAACTGCCCAAAGGGATGGCTGTCCTTACTTTCAAATGTCTTTTAAAAGGAAAAAG--AATTCAATATGGGATCGCTCTGTTAGCTGAATGCATTTCCTTTTTAT-TTTTATTTTATGTAGCAGAACAAGCAAATTTATCATT-CTAAGATAATTCTGAGAATCTTACAATTGCAGCACATAGTTTCTGGAGACTTCATTCATCATTATTCTGTTTTCAGTTGCCAACATATTGTAATCAAACTC-----------TCAAATTTTATTTTTACTTGTTATTTCAATTTT ............--------.......x:.x:....----------....x...x:-...x..::...x.x:xx:.::.-.::.:...:.x..x..-..:x......:x.x.x..:x.....---.x:x.:..:..x.:...:xx..x:.x.....:....x...:.:x........::xx:..x:....x-.:xx..:.......:::.:::.....:x......:..xx..:...x..::.x....:.x....x...:.:.x......:.....--..:....x:...:.xx...:..::....x.:...-------......-..x.x..:..............-x:....:.......-......:x:............:.:...........x...x..:x:.....x.x...:.....:.........x..:....::xx:....x:.:.....:..-----------..x..........:.:xxx.....x.::.::.. 12M8I16M10D10M1D22M1I16M1D25M3I66M1I84M2D34M7I6M1D22M1I14M1D101M11D33M 323/461 70.1% 482/94230402 0.0% 48/461 10.4% 13831531 NA +3035 chr4 + 190214555 35292313 35292312 35292388 76 TTTCTTGATAAATGAAGCAGTGCATTAACTTAATTCAAGGAATTTTTTTTCTTTTTTTTTTTTGAGACAGAGTCTC chr4 - 94230402 24444366 24444365 24444441 69785962 69785961 69786037 76 TTTATTGTAAAACAAAACAGAACATTAACGTAGTCATAGGATTTTTTTTTTTTTTTTTTTGGGGGGGGGAAATCTC ...x...xx...::..:...x:.......x..:.:xx....x........:.........xxx.:.:x::.:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 10847947 NA +28368 chr4 + 190214555 35298233 35298232 35298777 545 CTCACTTGGAAAATGTATGCACTT-TTGTGTCCTATCCCAGCAGTGCTCATATTAATCCTATAATGCAAAAT--GTCTAATTAGAA-CAAATTTGATAAGCAGCCAGTTATCTGTATTAAACATATGTGTTACTATTCATTGTACAAGTAAACCTATTATTTCCGAGAAAAATCGGAGTCATTAGATCAGAAAGGCTTACTGAAATAGAACT-------CTGCTAAGCAAAACTAAGAATTTCTATTTTAGAAGAAAACATACATATTATTTCAAAGTAAATGACACATTAATAGACATAATTAGCACTATAAAGTGTTCAAGAGTCTTGAGAAAATTAATATGAGTATTGAGTTTGAATGTGGTAGATTGCTTCAGAGGCCATCTACATATTCTATTATAAACAGGTTTTAGGCATATTAATGCTTTAAACAGGCTTATGAGGAAATAGATATTCTCTGAAGCAAGAAACTGGAAAATGAATATAAAGTGAGAATTGAACTCCTCAAATTAACAGAGATTCTTTTACTAAATAAGCTTCCTCCTTTTGGATCTTT chr4 - 94230402 21467054 21467053 21467585 72762818 72762817 72763349 532 CTTACTTGCAAAAT--ACTCATTTCTTGTGCAGTGTCCCAACATTGTCTACATTAATCCTATAATGCAAAAAAAGTCTAATTAGAAGAAAATGTGATAAGCAGCCTGTTATCTGCATTAAACATATGTGTCATCATTCTTTATACAAGTAAACCTATTATTTCTAAATGAAATCAGAGTCATTAGATCAGAAAGGCTTACTGAAATAGAACTTTCTTCATTACTAAGCAAAATTGGGGATTTCTTTTTCAGAAGTGAGGATACATATCATTTCAAAGTAAATG--ACAGTAATAGACATAATTAGCACTATAAAGTGTTCAAGAGTCTTGAGGAAATTAGTAT--GTGTTGAGTTTGAATGCACTAGATTACCTCTTAGG--------------TACTGCAAATAGGTATTAAGCATATTAGTGTTTTAAACAGGCTTATGGTGAAATAGATACTCTGAGAAGCAACACCCTGGAAAATGAATCTTAATAGATTGTGGAACTCTTTATATGATTAGAAATTACTTAA--AATTAAGTTTCTTCA--CTGGATCTCT ..:.....x.....--.:x..:..-.....:xx.:.....:..x..:::.:....................x--............-x....x............x........:...............:.::....x..:.....................::.:x:.....:.....................................-------:.:..........:.::.:......x...:.....x:.:x........:...............--...x...........................................:......:...--..:.............::x......:.:..xx...--------------..:.::...:....x...:........:..:................:x..........:...xx.......x.xx.............x.x..xx..xx:.x......:.:.x..x.x:...:...x:..x.--..x....:...:..x--:.......:. 14M2D8M1I47M2I12M1I125M7I64M2D58M2D35M14D133M2D15M2D10M 426/521 81.8% 532/94230402 0.0% 35/521 6.7% 13831179 NA +3158 chr4 + 190214555 35311466 35311465 35311529 64 CAGCCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATCACA chr4 - 94230402 18197129 18197128 18197192 76033211 76033210 76033274 64 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .....:xx:x..:.::........:.x...x.xx.x........:............:.::... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 17114337 NA +3125 chr4 + 190214555 35311756 35311755 35311818 63 TTCCATTTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCTATTCCCA---CCACACTACT chr4 - 94230402 5983420 5983419 5983485 88246918 88246917 88246983 66 TTCAATTTCCTCTTTCTTTTTTTTTTTTTCTTTTGCTTGAGCCTCCATTCCTAAACCCATCCTGCT ...x.......x...:.............:....x:..xx..:..:.....:.---...:x..:.. 53M3I10M 49/63 77.8% 66/94230402 0.0% 3/63 4.8% 29328336 NA +3132 chr4 + 190214555 35314457 35314456 35314521 65 TGAGTGTGTATGATGATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAATC chr4 - 94230402 7632195 7632194 7632259 86598144 86598143 86598208 65 TGTATGGGTGCGTTGGTTTTCTTTCTCTCCTTTTTTTTTTTCTTTTCTCCATTTAAAACTGGATC ..x:..x..::.x..:..:...:......:...........:....:.::x...:.:.:x.:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 27682262 NA +3083 chr4 + 190214555 35314458 35314457 35314503 46 GAGTGTGTATGATGATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 50117645 50117644 50117687 44112716 44112715 44112758 43 GACTGTGTATTAT---TCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..x.......x..---.............................. 13M3D30M 41/43 95.3% 43/94230402 0.0% 3/43 7.0% -14803187 -79427215 +3049 chr4 + 190214555 35314463 35314462 35314502 40 TGTATGATGATTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 82617154 82617153 82617193 11613210 11613209 11613249 40 TGTTTGCTGACTTTCTCTCTCTCTTTTTTTTTTTTTTTTT ...x..x...:.:........................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -47302691 -46927711 +3029 chr4 + 190214555 35314466 35314465 35314509 44 ATGATGATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929904 18929903 18929947 75300456 75300455 75300499 44 ATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..:x...x.:...........:.:.:.................. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 16384562 NA +3112 chr4 + 190214555 35316536 35316535 35316594 59 TCTTTAAATGGAAAAAAAAAAAAAAGAAGATATCTGTGTCTCATATGAATGCTCAAAAA chr4 - 94230402 14799007 14799006 14799065 79431338 79431337 79431396 59 TCTTTAAAAGGAAAAAAAAAAAAAAGAAGATAAACGTCACCCATGCAATTCCCCAAGAA ........x.......................xx:..xx.:...:::.x.x.:...:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 20517529 NA +3147 chr4 + 190214555 35335147 35335146 35335221 75 TTCCTGAGACTTGGTAATTCATAAAGGAAAGAGGTGGGGTTTTTTGTT----TGTTTGTTTGTTTGTTTGTTTTTGACA chr4 - 94230402 23278757 23278756 23278835 70951568 70951567 70951646 79 ttTTTGAGACTTGGTAGTTACTGAAGGTGTGTTGTGGTTTTTTTTGTTTTGTTTTTTGTTTGTGTGTGTGTTAATGACA ..::............:..xx.:....x:x.xx....xx.........----.x.........x...x....xx..... 48M4I27M 57/75 76.0% 79/94230402 0.0% 4/75 5.3% 12056390 NA +3195 chr4 + 190214555 35339218 35339217 35339284 67 ATAAACTCCCCTTTATATATATATATATATATATATACACACACACACACACACACACACGTATATA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......x:x:x....:....:...::x..:..xx...................x.....x:.:x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 26943414 NA +3474 chr4 + 190214555 35339241 35339240 35339338 98 TATATATATATATACACACACACACACACA----------CACACACGTATATATACACACATATGTATATATACATATATGTATATATACACACACATATGTATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x..:.....:.:.....----------:...:.......x:.....:x:...:.:.:x:........x:..:::x:...x.x...:.::.:.... 30M10I68M 64/98 65.3% 108/94230402 0.0% 10/98 10.2% -37781861 -56448541 +3060 chr4 + 190214555 35339242 35339241 35339305 64 ATATATATATATACACACACACACACACACACACACGTATATATACACACATATGTATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x.:.....:...::::x.:.:x.:....x......:::......... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 17818493 NA +3051 chr4 + 190214555 35339248 35339247 35339308 61 ATATATACACACACACACACACACACACACGTATATATACACACATATGTATATATACATA chr4 - 94230402 66904847 66904846 66904907 27325496 27325495 27325556 61 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATA ......::..::.........:........::....x..x::x..x:......:.xx.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -31565599 -62664803 +3093 chr4 + 190214555 35368664 35368663 35368715 52 TGCTAGTGATGGGTTTTTTTTTTGTTGTTGTTGTTTGCTTTTTGTTTTTATG chr4 - 94230402 4919470 4919469 4919521 89310882 89310881 89310933 52 TGGTGGTGGTAGGTTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTTATG ..x.:...:.:.........x...........x..xx:.x............ 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 30449194 NA +3300 chr4 + 190214555 35441355 35441354 35441457 103 ATACACATATATACATACATACATG--ATATATATTCGTACACATATATACATACATATACAATATATATTCATACACATATATACATACATATA-CACACATATT chr4 - 94230402 78881517 78881516 78881620 15348783 15348782 15348886 104 ATACACATATTGAAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATA--CATACACAAATATATATATGTATAGAACACATTTT ..........xx.x..x:...:x..--....::x...:x...x.:....x::..x...xx:........--........x.....:...::....-x......x.. 25M2I42M2D24M1I10M 74/101 73.3% 104/94230402 0.0% 5/101 5.0% -43440162 -50790240 +4885 chr4 + 190214555 35447531 35447530 35447795 265 GAGGAAGGGAGGGAGGGAGAGAGGAAGGAAGGAAGGGAAAAAGGAAGGGAGGGAGGGACAGAAGGAGGGAGAGAGAGAGGAAGGAAGGAAGGAAAAGAGGGAAGGAA---GGAAGGAGGGAAGGAAGGAAGGAAGGAAAAGAGGGAAGGAATGAGGGAAGGAAGAAAAAGAAGGAAGGATAGAGGGTAAGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAATGAAGGAAAAAAGGAAGGAAGGAAGAGGA---GGAGGAAGGAGGGAGGAA chr4 - 94230402 57300995 57300994 57301255 36929148 36929147 36929408 261 GAGGCGGGGGAAAGGTGGGACAAGTGGGAATGTAGGGAAAAAGGAAGAAATGTTTGGAATTTACGAGAAAACGTG-------GGAACGTAGGAGAAAAGGTAGGGAAAATGTAAGAATGTAGGGGATAATGTGGGAAAAGGTGGGAAAGCA-GGGGAAATGGTGGAAAAAAATTGGGAATGTTGGGGAAAAGGGTGGAAAATGTGAGAATGAAGAGAAAAACG--TGGAAAAAGTTGGGATTCTAGGGGAAATGGAGGGAAAAGGTAGAAA ....x:...:::::.x.:..x.:.x:....x.x..............::.x.xxx...xxxx.x...::.:x.x.-------....x.x....:..:...x.:....---.x...:.x.x.:..:.x:.x.x::.:...:.x.....:.x.-.:..:..x.:x.:....:..xx::.:..:xx...x..:.:..x:.:..:x:x:...:x....::.::..:.--x.:......xx:...xxxx..:...---.....:.::...x..:.. 75M7D25M3I41M1D71M2D25M3I18M 153/255 60.0% 261/94230402 0.0% 16/255 6.3% -21853464 -72376938 +3038 chr4 + 190214555 35447589 35447588 35447650 62 CAGAAGGAGGGAGAGAGAGAGGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAAGGAGGGAAG chr4 - 94230402 92619641 92619640 92619702 1610701 1610700 1610762 62 CGGGAATAGGGACGGGATGGGGACGGAGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGAG .:.:.:x.....x:.::x.:...x...:....x..:.:......x..:....:......:.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -57172052 -37058350 +4412 chr4 + 190214555 35447601 35447600 35447817 217 GAGAGAGAGGAAGGAAGGAAGGAAAAGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAAAGAGGGAAGGAATGAGGGAAGGAAGAAAAAGAAGGAAGGATAGAGGGTAAGAAGGAAGGAA--------GGAAAAGAGGGAAGGAAGGAATGAAGGAAAAAAGGAAGGAAGGAAGAGGAGGAGGAAGGAGGGAGGAAGGGAGGAAGGAAAAAAGGAAGG chr4 - 94230402 60249505 60249504 60249718 33980685 33980684 33980898 214 GGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAG---------ATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAACTTGTCAGAGACCAGCAAAAGGCAAGAAGTGGCAGAAAGCGGGAATGGA-AAATATGAATTGGAAGTAGGG-GCAATGGAGTCAAGAAATGGGTAGGG .:..x..:::.:...:..:.:.x.x...:.:......x......x:...xx.....x:...x:.....---------...xxx.x.....x....x..xx::..:..xx::...:....:.x..:..--------:..xx..x:::.:.x...:.:..:x:....:x:....x.:.-:..x.x..:xx.....x....-.x..x....xx.:....x::.x.:.. 68M9D50M8I41M1D21M1D26M 129/206 62.6% 214/94230402 0.0% 19/206 9.2% -24801904 -69428498 +3021 chr4 + 190214555 35448024 35448023 35448096 73 AGGAAGAGAGAGAGGGAGAAGGAAAGAAGGAAAAAGGAGGAAGAAGGGAGGAAGGAAGGAAGGAAAGAAGAAA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:..:.:.:.:.:..............:.....:..:::.:.x...x::..:x...xx.x::..:.x.:.. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% -8952472 -85277930 +3357 chr4 + 190214555 35457636 35457635 35457741 106 AGGAGAGAGAGAGAGAGAAAGAAAGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAAAGACAGAAAGAAAGAAAAGAAAGAAAGGAAGAAAGAA-AGAAAAGAAGAAA chr4 - 94230402 25255616 25255615 25255720 68974683 68974682 68974787 105 AGAACAGATGGGAAGACAGGGAAAGCAG--AATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGTAGA ..:.x...x:.::...x.::.....x..--..x.x.x.::..:.xx...x...::...:..x...:...:....:...:..:...xx:.....-........:x.:. 28M2D63M1I13M 70/104 67.3% 105/94230402 0.0% 3/104 2.9% 10202020 NA +3583 chr4 + 190214555 35457660 35457659 35457774 115 GAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAAAGACAGAAAGAAAGAAAAGAAAGAAAGGA-------------------AGAAAGAAAGAAAAGAA--GAAAGGAA--------GGAAGACAGGAAGAGAAAAGAGTGGTAAA chr4 - 94230402 68467542 68467541 68467685 25762718 25762717 25762861 144 GAAAAAAAGTGAGAGGAAGAAAGAGAAGAAAGAGATCAAAATAAATAAAAGAAAGACCAGATATTTGTATTTTGGAAATCATATAGAGGGCAATGAATTGGAAGGAAGTGATTGTGAAAGACAAAAAGTGACAAAGATGAGAAA ...::....x:....:........:......:...:x:...x...x..........xx:..-------------------.x.x...::.x..x...--.:......--------.:......::...x..x..:::..:x... 61M19I17M2I8M8I29M 83/115 72.2% 144/94230402 0.0% 29/115 25.2% -33009882 -61220520 +3023 chr4 + 190214555 35457673 35457672 35457734 62 AGAAAGAAAGAAAAGAAAAAGACAGAAAGAAAGAAAAGAAAGAAAGGAAGAAAGAAAGAAAA chr4 - 94230402 27981741 27981740 27981802 66248601 66248600 66248662 62 AGAAAGAGAAGAAAAAATAAGACAAAAAGAAAGAAAAAAGAGTCATGTGAAAAGTTAAAAAA .......:.::...:..x......:............:.:..xx.x.x::....xx.:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 7475932 NA +3063 chr4 + 190214555 35464930 35464929 35464986 57 TGACAATATTTAATGTATATGTGTGTGTGTGTGTGTGTATGTATACTTTTTTACATT chr4 - 94230402 27034815 27034814 27034871 67195532 67195531 67195588 57 TGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTT ...x...x.x.x..:.....:...................:..:x:..:...x.x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 8430115 NA +3099 chr4 + 190214555 35464937 35464936 35464981 45 ATTTAATGTATATGTGTGTGTGTGTGTGTGTATGTATACTTTTTT chr4 - 94230402 27034820 27034819 27034864 67195539 67195538 67195583 45 ATTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCT .....x.:.....:.:...............:.:.....:...:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 8430117 NA +3208 chr4 + 190214555 35509086 35509085 35509145 60 ACAGTCCTTACACGTACACACACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 82109327 82109326 82109386 12121017 12121016 12121076 60 ATAGTCTTTACTTGTGTACAGGCACATACATATCCACACACACACATACACCTTTGTATA .:....:....x:..::...x:....:...:.:x............:....x.x.:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -46600241 -47630161 +3235 chr4 + 190214555 35509119 35509118 35509169 51 ACACACACACACACACACATATATATATTTTTTTCTTTTTGTGAGGAGTCT chr4 - 94230402 5683041 5683040 5683091 88547312 88547311 88547362 51 ATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGAGGAGTTT .:.:.........:...:......:xx.......:.....x........:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 29826078 NA +15435 chr4 + 190214555 35556280 35556279 35556688 409 TAATATCATTTTTGAGAGGCATATTTTGATCACTTATAGTAAAACACTAAACACTT-----CAAAAGAAATTAACAGAAATAAAGCCAACAGGTTTTATTCATTTATTGAGGAATGCTTTTAGT-CAAGCATTGTGATTATAAATGAATTGTATTCATTACCTACTTTTTTAAGTGGATGAAAAATTATACTGCTTTCACCCAATGTGTGCCAAACAAAAGGTGGAATAAAAGGTAGCATTGAAATATCTGAGCAGTCTGACTACAGTATTAGTCACATCCTACACACTGACCTTTCTAGTGGCAGGGACATTCAGTTAGCTCTTCCAAGGAGTT-GGCATTTTCACAAGTAATAAACCTCTTTAATGTCAGTCATTTGCTTAGCAGG-ATTA--CCGTCTCTTGACTGATGAGTTTCT chr4 - 94230402 21622300 21622299 21622716 72607687 72607686 72608103 417 TATTACCTTGTTTGGGAAATCTTTCTTTGTCACTAGTATGGTGTCCCTAAGCAACTTGCCACAAGAAAAAAAAAAAAGAGCAAAACAGATAGGTATGATTCATCTAGTGCAGAATGCTTTTAATGAAAGTATTGTGCCTCTAAATGAGTGCTATCTGTTATCTACTTTTTAAAACGGATGAAAAATACTGTTGCTCTCAACCAATATGTGCCAAACAAAAGGCACAATAAAA-ATGGCACTGAAATATATGAGCTCTTTGACAATAGTATTAGTCACACCTTATAGCCTGACCTTTCTGCTGGCAGGGACATTCACTAAGGTGTTATAAGAAGGTAAGAATTTTCAGTAGTAAGAAAATTCTTT-ACATCAGTTATTCACTAAACAAGCATCATTCTCTTTCCTAACTGACGATGTTTT ..x..:.x.x....:..:::x.x.:..x:.....x:..xx:x:x.x....:..x:.-----...:.:...xx..x.::.::...:.x:.:....x.x......:..x..x:...........:.-x...:......x:.x.......:.xx...:::...:.........x..::...........xx.::....:...x.....:................::x.......-:.:...:........x.....xx.:....x.:.............:.:..:.xx...........:x...............x.x..x.x..x:...:..x.-:.x.......xx.....x...x:.....-.::.....:...::..x.:..:.-..:.--.:x.:..:.:.....:..xx..:. 56M5I63M1I107M1D102M1I28M1D23M1I4M2I24M 288/407 70.8% 417/94230402 0.0% 12/407 2.9% 13933980 NA +10129 chr4 + 190214555 35565472 35565471 35565767 296 TTTAAACTGCTCCCTCAAATGG----TTCTGCTACATTTTAAATTTTGATCACACACTGAGTTAAAAG-TTCTAGCGTAGGCATCTCTACTTCCAGCTTCAATAGTTCTGTAAAATAATTTAGCTTTCTTGTTAATATGGTTATTAAATCAGGGTCGGACTAACTGCTGATCTAGCTCCAGTAAAATCTCATGAATTATACAAATCAAAGTTGTATAATTTATAAGTCTGCTCATGGAAATTTTAACTGATGCAAAAACAAAATCTAGGCTCAGGTATTAGTTTCAATGTCTTTTATTTTT chr4 - 94230402 21629439 21629438 21629732 72600671 72600670 72600964 294 TTTAAATTACTGCTTCAGAGAGGCATTTCCACTACATTATAGATTTTTGTCACATACTGACTTAAAAGCTTCTATTG----CTTCTTTACTTCCAGCTTCAGTAGTTCTGTAAAATAGTGTAGCTTTCTTGTCAATATGATTATCCAGTCTAGGTCATACTGAATGCCAATCTAGCCCCAGGAAACCGTCA-AATCTATTAGGTTTGAAACTGTGTAATTAACAGTGTTCTTAATGCACTTTTTAATTTAAGATAGAGTAGG--CAAGTCTCAGGTAATACATTTGGTATTGCTTTTTGTT ......:.:..x.:...:.x:.----...::.......x..:.....x:.....:.....x.......-.....x:.----.x...:..............:...............:.x............:......:....:x.:..x:....:x...:.x...::.......:....x...x:x...-:.x:...xx::x.::..::...:.....x.:.:xx:.x:.x...x.xx......:.x.x.xx.:.::.::--.x..x........x..xx..:::.:.:x:..x..x.. 22M4I42M1I8M4D110M1D70M2D37M 200/289 69.2% 294/94230402 0.0% 12/289 4.2% 13936033 NA +14256 chr4 + 190214555 35588447 35588446 35588931 485 TCCTAAGAATAGTCTCATTTATAAAGCACAAAAGAAAATGAATGTGGGTTAAATAATAACCATTTAATGTAAAATACAACTATCAATTACAGAAATTCATTAATTGAGTTAAATATTTGCCAACAGTT-CTACCCACTTATTTTATTTTTAAGATATTTCCATCAAAACA-GTCTCATTAAA-TTTTGTATGTTAATCAGAATGTTTACCATTTAATTTTGCCTAAC-ATTGCTCTGCATTTAGGTTTTGGAATCTTTTTTCATTATAATTTTGAAGCAATTAACTCACAAGGAAAAAAAGTAATTTGCAGGTTTGTATAATTGCACAGATGTTAG---TTGGCTACAGTAGAAAGAATGGC--AGGATTCTGAGAGTTT---CCTTCAAAAGGAAAATAGAGACAAGAATATGTACACATTAAATTCTTCTTTGGTTGATAATTCTTATAACTCTGTTTTTTAAATT-GTATACAGTAAATTCGGCTTAATAAAAGT chr4 - 94230402 21645943 21645942 21646418 72583985 72583984 72584460 476 TCCTTGCAGCAGTCTCATTAAAAGAG-----AAGAAAAGAGAGGTTGTTTCCGTAGTGGTACTTAAGTCTAGGGTAAATCTATCAATTATTGAAATTCATTAATTAAGCAAAATATTTACCAAAAGTTGCTGCACACCTATCTCAGTTTGAAGATTTTTCTATCAAAACACATCTCATTAAAATTTTACATGCTAATCAGTATGTTTACAATTTCATTTTATGAGACTATAATTTTGCACTGTGGTTTTGAATTCTTTT--CATTATAATTTTATGCCAATTAACTCAGAGAGGAAAAATGTAATTTACAGGTTTGCATAATTGCCCAGATGTTAAGATGTAGCACAAGTTGAGAACAAAACCAAAGACTTTTTAAGCTTATGATTTTGAACAGAGAAAAGCTA-------------ACTTTAGTTTCTTC-TTGGCTGCTAATT-TTGCAGCTCCATGTTTGGAGGTAATACACAGCATTCTGACTTTGATTAAAAT ....x:x.::.........x.x.:..-----.......x::.x..x.x..xx:..:.:::xx..x.:.x..:::..x.x..........:x..............:..:x........:....x....-..:.x...:...:.:.x...x.....x....:.........-:..........-....::...:.......x........x....x.....::xx:..-..x::.:....:.xx.......:.x......--............:x:x...........x.::.:.....x.......:........:........x.........:---x.:..xxx...x..:.:x.x::.--.:..:.:.xx:..:..---x:..::..x:..:..x..xx.-------------..x...:x......-....:..x.....-..::.:...::.x...x:.:x.-:..:....:.xx:.x:x:..:..x...:. 26M5D97M1I41M1I11M1I44M1I31M2D75M3I23M2I16M3I21M13D14M1D13M1D22M1I29M 325/463 70.2% 476/94230402 0.0% 35/463 7.6% 13942504 NA +19603 chr4 + 190214555 35614075 35614074 35614528 454 TCAAAAACTTAAGGTACTTAGGAGAAAATATAGAGGCTGTCTTTTTTGGAATTAAGTTAAAATCTATC--TCTCTTGATCTACAAACGTTATTGC-CATTTGTACTTTATAAGTTCTATTTATACAGAGTCCTTTGGGTATTAAACTGCTTTTTCTGCAAGTCTAGTTGCTTATTATAAAAGCATTTTCTCCAGGTTCATTGACAGCTCATCAACCAACAAATCTCAGTAGTGACAAACTTCAGTGATTGAAGCACGTATCTTGATTTCTCTGAGAATCTCAATATATTTCTGATTCAATACTGACTTTACTGTTATTAGCTCATCTCCTTTTTCACTGCCTCCTTTCATCCATCAAGAAAAAACTACATGTCAGCACTCTAATCACTTGAACTGAGAG------AAGGAAAAAAAATAACATTAGTTCACTTTA---TCCATACTACCATTTAATTCAACTTGCT chr4 - 94230402 21655513 21655512 21655964 72574439 72574438 72574890 452 TCCAAAACTGCAGATATCT--GAAAAAGTATG---------TTTTTTAAAGTCGAGACTAATACCATCCTTCTCTTGAT--GCCAACTTTATTACTCTTTTCCACTTTATAACTTCTATTTATACTGAGTCCTTTGAGTCTTAAACTGCTTTTTCTGCATGTCTAGCTTCTTGTTATAAAACCTTCCTCCCTCAGTACTTCGACAGCACATCAACCAACAATTCTCACTTTTGACAAATTCTCATGATTGAAGCACATATCTTGATTCCTCTCAGTACCTCAACACATTTCTGATTCAATACAAACTTTACTGTTATTAGCTCATCTTGCCTTTTACTGTCTCTTTTCATCCATCAAGCATAAAATACATGTCACTCCTACAATCATCAGATTTGAAAGGCCAGAGGAGGACAAGAATAGCAATA-TTAACTGTAGTTTCTAGACTACTTTTGAACTATTCTGGCT ..x......xx..:..::.--..:...:...:---------......::.:.::..x:x..xx.:...--.........--:.x...x.....:.-.x...x:.........x............x..........:..x...................x......:.x...:........x.x.::..:.:x:..x.x.:......x.............x.....x.xx.......:.::x:............:..........:....x..x.:.....:.:................x:.......................:x::...:....:...:..............x.x...x.........x:x..x:.....::x..x:...:..------:::.:.x..:....:..x..-..x...x..---..:.x.....:x..x..:.xxx..x... 19M2D11M9D27M2I9M2D14M1I303M6I20M1D9M3I28M 334/440 75.9% 452/94230402 0.0% 26/440 5.9% 13958562 NA +3067 chr4 + 190214555 35621960 35621959 35622001 42 TTTTCTTCATGTAATGTAACAAAATCACAGGCGTGATATCTC chr4 - 94230402 68928793 68928792 68928834 25301569 25301568 25301610 42 TTCCCTTCATGTAATGTAGCAAAATTACAGATGTGATATCCC ..::..............:......:....::........:. 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% -33306833 -60923569 +3010 chr4 + 190214555 35660736 35660735 35660778 43 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATATATACA chr4 - 94230402 50558510 50558509 50558552 43671851 43671850 43671893 43 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACA ...::.....x..........::...........:....x... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -14897774 -79332628 +20835 chr4 + 190214555 35689733 35689732 35690106 374 AAAGAAGTAAAAATGGGAGGTATATTTGTCTCCTTGAAAAGGTTATAAAACTATTTTGTAAAAAGTTTCCCTTGGGGGCTTTCCGAAAACAACTGGGTCAATTCCACTTCAAAACACAATGAACAAAACATATA-GAAGACTAGACT-TTTTGAACCAGCAGCTGGACTACCTGCGGCTTTCCTTAACAAGTGGGCCAATTCCACCTGGAAACAGAATGAACACAAGATATAAAAAGA-----TCAAAATTGTTTGAACCAGCAGCTGTTCTACCCTCAGCAGTTAATCTTTCCTGGCAATCTGTTAGAGACATACATTCCTCAGGCTAACAGGACTAAGAACCTTTTTGCTGACTGCTGTGCCTCTGGGACATGCTTAGT chr4 - 94230402 21671398 21671397 21671771 72558632 72558631 72559005 374 AAAGAAAAAAAAAAAAGAG-CATATTTCACTCCTTGAAAAGGTTAGCAAGCTATTTTGTAAAGTGGTTTCCTTGGGG-CTCTCC-AAAACAACAGGG-CTGTTCTA-TGCAGAA-ACAATGCACTGAAGATATAAGGGGACCATAGTCTTTTGAACCAGCAGCTGTGCTACCTGCGGCTCTCCATAACAAGCAGACCAATTCCATGTGGAAACAGAATGAGCACAAGATATAAAAAAAAAAAATCAAAATTGTTTGAACCAGCAGCTGTGCTACCTGCAGCAGTTAATCTTTCCTGGCAATCTGTTAGAGACATGCATTCCTCAGGCTAAGAGGACTAAGAAGC-TTTTGCTGACTGTTGTTCCTCTGAGGGAAGCCAAGT ......:x.....x::...-:......xx................xx..:............:x.x..:........-..:...-........x...-.x:...:.-.x..:..-......x..x:..x.....-.::...:.x.x.-.................x:............:...x.......::.:.........:x..............:...............:.-----..........................x.....:x.....................................:...............x...........x.-............:...x......:.:x.x..:x... 19M1D57M1D6M1D12M1D8M1D7M1D19M1I12M1I90M5I101M1D36M 311/367 84.7% 374/94230402 0.0% 14/367 3.8% 14018335 NA +4326 chr4 + 190214555 35689834 35689833 35690006 173 TTCCACTTCAAAACAC--AATGAACAAAACATATAGAAGACTAGACTTTTTGAA--------CCAGC---------AGCTGGACTACCTGCGGCTTTCCTTAACAAGTGGGCCAATTCCACCTGGAAACAGAATGAACACAAGATATAAAAAGATCAAAATTGTTTGAACCAGCAGCTGTTCTACCCTCAGC chr4 - 94230402 21671381 21671380 21671569 72558834 72558833 72559022 189 TTCCACTACAAAGAAAGAAAGAAAAAAAAAAAAGAGCATATTTCACTCCTTGAAAAGGTTAGCAAGCTATTTTGTAAAGTGGTTTCCTTGGGGCTCTCCAAAACAACAGGGCTG-TTCTATGCAGAAACA--ATGCACTGAAGATATAAGGGGACCATAGTCTTTTGAACCAGCAGCTGTGCTACCTGCGGC .......x....:x.x--..x:..x....x.x.x..x.x.:.xx...::.....--------.x...---------.:x...x:.x.:..x....:...xx.....xx....::-...:.:x::......--...x..xx.........:::..:..x.:.:x.................x.....:x.:.. 16M2I36M8I5M9I38M1D15M2D60M 118/170 69.4% 189/94230402 0.0% 22/170 12.9% 14018453 NA +3443 chr4 + 190214555 35698938 35698937 35699037 100 ATATATCATGTATATCTACCTATCTACCTATATATGTGTGTGTGTATGTATATATATATATAGAGAGAGAGATAGAGAGAGAGAGAGATAGATGTGGATT chr4 - 94230402 33398796 33398795 33398887 60831516 60831515 60831607 92 ACAGACCATATAAATGTATTTAG------AAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAG--AGACAGAGATAGATAtgtatgggaact .:.x.:...:..x..x..::..x------.x:.:..:..........::.:.......:.:..........--...x.....x...x..:x...x.:.:. 23M6D42M2D27M 66/92 71.7% 92/94230402 0.0% 8/92 8.7% 2300142 NA +3409 chr4 + 190214555 35698966 35698965 35699036 71 TATATATGTGTGTGTGTATGTATATATATATATAGAGAGAGAGATAGAGAGAGAGAGAGATAGATGTGGAT chr4 - 94230402 33398812 33398811 33398880 60831523 60831522 60831591 69 TATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGA--GAGAGAGACAGAGATAGATAtgtat ...x..x:x.....:..:...:....:.:.....x.x.x.....--........x..........:..x.. 44M2D25M 54/69 78.3% 69/94230402 0.0% 2/69 2.9% 2300154 NA +3827 chr4 + 190214555 35698968 35698967 35699034 67 TATATGTGTGTGTGTATGTATATATATATATAGAGAGAGAGATAGAGAGAGAGAGAGATAGATGTGG chr4 - 94230402 33398816 33398815 33398882 60831521 60831520 60831587 67 TAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgg ..x.x.....:....:......:.:.......x.x.......x.....x.....x.....x:.:... 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% 2300152 NA +3613 chr4 + 190214555 35727386 35727385 35727455 70 CAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTATGTGAGGTTAAATTAATCTTTCCCTTGTCTTCGAAC chr4 - 94230402 14581396 14581395 14581462 79648941 79648940 79649007 67 CAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGT---TTTGGATTATCATATACCTTATTTTTGAGC .................................x...---x..::....x:x.x.x....:.:..:..:. 37M3D30M 54/67 80.6% 67/94230402 0.0% 3/67 4.5% 21145990 NA +6792 chr4 + 190214555 35736703 35736702 35736924 222 AGATAATGTCAATAAAATAGAATTTTGTCACAAGATAATGATCTCCTGCTGTTACATAACCATGAACGTGAAGCCAAGTTATTTATTTTCAAAGCAGGGAAAATCAATCCCAGAATTATGTTCTGTAACTGAGATTTTAGTTCTGTTATA-CAAAATGATGCATGTTGATTTAATAATTTTGCCTGACGGATGTTTGAGAGAGAAAATGACAGATGTTCTTTG chr4 - 94230402 18877643 18877642 18877856 75352547 75352546 75352760 214 AGATAATGTCAATAGGATAGGATGTTATCACAAGATAATGGTCTCCTGCTGCTAGATAAGTGCTGA-GTCAAAACAA--CGTTTATTTTCAAGGCAGGGGACATTGATCCTCTGACAACTTTCTATTTCAATGACATTCTTGCTATTACATTAGATTGATGCACT----TATGACCATTTTGTTTAATGGATATT--AGTAGTAAAGTGACAGCTGCTTGTTG ..............::....:..x..:.............:..........:..x....x:::x:.-..x..:x...--::...........:......:.x..::....:xx:.:x.:x....:.xx.x:x..:x..xx.x..:...:.-:.:.x.......:x----.x.:.:x......::.:.:....:..--..x::x...:......x..:.:x... 66M1D10M2D71M1I14M4D26M2D26M 145/213 68.1% 214/94230402 0.0% 10/213 4.7% 16859060 NA +3249 chr4 + 190214555 35751302 35751301 35751359 58 ATCACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652080 67652079 67652137 26578266 26578265 26578323 58 ATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..:x.....::...x...:...:..xx.:.:.:.:.:...................:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -31900778 -62329624 +3129 chr4 + 190214555 35751304 35751303 35751357 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -31900780 -62329622 +3295 chr4 + 190214555 35751308 35751307 35751361 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -31900776 -62329626 +3149 chr4 + 190214555 35751310 35751309 35751398 89 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA-GAGACAGACAGACAGAATTTCCTATTCATCCTTGA chr4 - 94230402 67652084 67652083 67652173 26578230 26578229 26578319 90 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATTGCCAAGAGCAAAGCCCTACTGAGCTTTGA .....::...x...:...:.xx:.:.:.:.:.:...................:.-x...:x.x..::x:x..xx:....:.x.x.:.... 54M1I35M 59/89 66.3% 90/94230402 0.0% 1/89 1.1% -31900774 -62329628 +3113 chr4 + 190214555 35789163 35789162 35789252 90 TAGGAGGAGAGGAGAACGGGAGGGGATGGGAAAGGAAAAGGGGTAGGTAGGAGGGCAGGGGAGAGAGGAGGGGAAGGGAAGGGAGGAGAG chr4 - 94230402 81799741 81799740 81799830 12430573 12430572 12430662 90 TAGTGGGGATGGAGGACAGGAGGAGATGGGAAAGAAGGGTGAGCACAAAGCAGGGAGGCTGTGAAAGGATGCAAACAGGCAGGAGGAGGG ...x:..::x....:..:.....:..........:.:::x.:.:.x:x..x....x:.xx.x..:....x.x:..x:.:x:.......:. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% -46010578 -48219824 +3350 chr4 + 190214555 35790148 35790147 35790234 87 AAAAAGAAAGGGGAAGGGAGAAGGGAGGGAAGGGGGAGGGAAGGGGGGAGTAGAAGGGAGGAGAGGGAAGGGGAGGATGGGGGAGAG chr4 - 94230402 79462941 79462940 79463023 14767380 14767379 14767462 83 AAAAAAAAAAAAAAAGGG----GGGGAAAAAGGGGGGGGGCTGGGGGGAGCTGGTGGGAGGAGGAGGGGTGCGTAGATGAGGAACAG .....:...::::.....----...::::.......:...xx........:x.:x........::..::x.x.x:....:..:.x.. 18M4D65M 56/83 67.5% 83/94230402 0.0% 4/83 4.8% -43672793 -50557609 +8617 chr4 + 190214555 35806131 35806130 35806435 305 AAAAAAGAAAACAGCAACTTTTAATTTATTT--------AAAAAGTGAGTGTTATTCAGATTTACTATCAA-AGTAATTAATGGTAACCACTCTGCATAATATTCAGCTAATAAATGTTATGCCTTGTAAGCCACAGAGGAGTAAAACCTAATATGTTCCAAGGTT-AAAGAAGACAGAGGAATGACGACCAATCTGGGAAAATTAACTACTGCACTTGTATGAAGCATTATGGACATCAATCCTG---------TTTCCCCTCCCTACTTCAAACACAAGTAATTCCTGGTGTTTTTTTTTTTTATTTTAATATCTCAAGATA chr4 - 94230402 21713104 21713103 21713423 72516980 72516979 72517299 320 AAAAAAATAAACTGTTAATTAGAACTTATTTTTGTCAGAGAACAAAGAGCATCAGTCAGATTTACTGTGGATAGTAATTAATAGTGACTGTGCTGCATAATACCCAGTTAATAAATTCTATGCCCTATACACCAGTTTGGAATTTAATTTATCATGTTCCAAGGTTAAAAAAAGACAGTGGAAACATGA-GAACCTAGAATAATTTACTACACCATTTGTCTGAAGTGTCATAGGCAAGACTTCTGGCTTTATGTTTTCATTTATAAATATTAATTACATGTAATTT---GCATTTTTAACTCTTGCATGAATGCTACAAAACA ......:x....x.:x.x..xx..:......--------:..x.:x...::.:.x...........:.x:.-..........:..:..:::x..........::...:........x:......:.:..x:...xxxx...:.xx..::..x:.............-...:.......x....xx.:..-x..:..:.:.x....x.....xx..:....x.....::.:..:.:..xx.x.:...---------....x::.x:xx.:x.:..x:...x......:---.::.....xx:.:..::x.x...:::x...:.:. 31M8I32M1I94M1I22M1D56M9I32M3D34M 201/301 66.8% 320/94230402 0.0% 23/301 7.6% 14093027 NA +3185 chr4 + 190214555 35808463 35808462 35808536 74 AGGAAAGAAAG---------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAATAAAAGAAGGA chr4 - 94230402 9237676 9237675 9237758 84992645 84992644 84992727 83 AGGAACAAAAGCTCAGCTGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGA .....x:....---------:.:..x.x..x.:......:..:x..x.:...:.....:....:....:...x....:.:... 11M9I63M 54/74 73.0% 83/94230402 0.0% 9/74 12.2% 26570787 NA +3011 chr4 + 190214555 35826918 35826917 35826979 62 TGAAGAATGGCCTAAACAAAGAATACACACACACATACATAAATATATATATATATATATAT chr4 - 94230402 36119581 36119580 36119642 58110761 58110760 58110822 62 TGAAGGACAGCATAGGAACAAAATATACACACACACACATATATATATGTCCATGAATACAT .....:.::..x..::x.x.:....:.........:.....x......:.x:..:x...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -292663 -93937739 +3293 chr4 + 190214555 35826921 35826920 35827025 105 AGAATGGCCTAAACAAAGAATACACACACACATACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAAGCACCC chr4 - 94230402 8395773 8395772 8395877 85834526 85834525 85834630 105 AAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACC .:...xx..:.::.x.x.x:.::.::::::....x.:.x:...x..:....:...::x..:..xx...:...............x.....x.::x.:..:x.x.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 27431148 NA +3119 chr4 + 190214555 35826948 35826947 35827013 66 ACACATACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:..:xx.:::.:.::.:.::.:...:......:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 20862129 NA +3108 chr4 + 190214555 35826950 35826949 35827015 66 ACATACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.x...x:.x.:::.:.::.:.::.:...:......:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 20862131 NA +3219 chr4 + 190214555 35826952 35826951 35827019 68 ATACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAA chr4 - 94230402 8395796 8395795 8395863 85834540 85834539 85834607 68 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA ..:::.:x...x.:..:...x..:....:...::x..:.:xx.:.................x...... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 27431156 NA +3230 chr4 + 190214555 35826952 35826951 35827017 66 ATACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...x.x..:.x.:::.:.::.:.::.:...:........xx........::............. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 20862133 NA +3615 chr4 + 190214555 35826953 35826952 35827022 70 TACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAAGCA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:......:..:...x..:....:...::x..:..xx.:.................x.....x.::.::. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 27431152 NA +3123 chr4 + 190214555 35826954 35826953 35827012 59 ACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.x.x..:...x..:....:...::x..:..xx...................x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 27431150 NA +3436 chr4 + 190214555 35826954 35826953 35827018 65 ACATAAATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...:......:.x.:::.:.::.:.::.:...:....:...xx........::............ 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 20862135 NA +3065 chr4 + 190214555 35826962 35826961 35827016 55 ATATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x..:....:...::x..:..xx.:.................x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 27431154 NA +3268 chr4 + 190214555 35833990 35833989 35834066 77 CTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTGTGTCA chr4 - 94230402 15963380 15963379 15963455 78266948 78266947 78267023 76 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGA-TTTATCTCTGTCA ......:.......:.......::..:.xx..:........xx.:...x....:.x..:.x..-.:.xx..x..... 63M1D13M 56/76 73.7% 76/94230402 0.0% 1/76 1.3% 19870610 NA +3304 chr4 + 190214555 35877714 35877713 35877792 79 GGTTTCCCAGAGAAATAGAACCAATAGAGTGTGTGTACACACACACACACACACACACACACACACAAAAGAGTGAGAA chr4 - 94230402 34061843 34061842 34061916 60168487 60168486 60168560 74 GGATTTTCACAGTAATACAA-----AGTGTGTGTATATACATACATACATACACACACGTACTCAGAAAAGAGAAAGGA ..x..::..x..x....x..-----..x......:..:...:...:...:........::..x..x.......x:..:. 20M5D54M 55/74 74.3% 74/94230402 0.0% 5/74 6.8% 1815871 NA +19856 chr4 + 190214555 35882029 35882028 35882462 434 AGCTCTTCATTTT--TTTCTTGTTGATCAGAATTTCATTAAGC---TGTTCCTTAATGCTCCATGACTTCGTTTGCTCCGGATTTACATTACTCAACCATATCCCTTAAGCTTAATTAAATTTGTTTGTCCATGCCTTGAGCACTTTTCTCTGTTCTGCAGCAAAAAAAGGTAAAAATCAAGGGACACTCACTCATCTGTGAAGCTGTCGGTCCATCATAACTTAAATATTGATTTTGGGGAAGGTTGTGACATTCCCTAGGTGAGCATGTCAAGTTTGTTGACAGAGAGCTCCCTACTTAACTGAATATGATGTCTGTATGGGAAGTGATGAAGTACATCAGTGATGTATAAG------------TTTTCTCTGTCACT-----GTGTGTGCAGTAGAGGGTAATGATATTCCATCGTGTGCTGACCAAACTCCATGCGCCTTGTCTTATTACTT chr4 - 94230402 21722952 21722951 21723396 72507007 72507006 72507451 445 AGCATTTTATTTTGGTTTCTTGATGATCTGAATTTCTTTAAGCAGATGATTTTTAACACTGCATGAATT-GTGGGCTTTAGGTTTG---TGCTCAGCCATATCCCTTA-GCTTAATTAGGTTTGTTTGTTCATACTACAAGGACTTTGCAAAATTCTGGAAAAAGAATGGGTAAAA-TCGGAGGACATTCACTCAGCTGTTAAGCTGTCAGTCCATCATAACTTGAATATTGATTTTGGGGGGGTTGGTGACATTCCCTAGGTGTACATGTCAAGTTTGTTGACAGCAAATTCTATACTTAATTGAATGTGATGTCTGTATGTGAAGTGATGAAGTATGTCAGTGATGTATATGCTCTTCCTCCTCTTCCCTCCAGCACTTTCCAATATATTCAGTGGCTTGTTATGATATTCCAGACTGTTTTGACAAAGCTGC-----CTTCATTTTATTTCTT ...x:..:.....--.......x.....x.......x......---..x.::....::..x.....x..-..xx...:::.:...:---.:....:............-.........::.........:...:.:x::..x.....x.xxx:.....x.:x..:..x:.......-..:::.....:.......x....x........:..............:................::.x.x.................x:....................x:.::..:x.......:.....:.............x..............::.............x.------------..::...::x....-----:.:.:.x....:.xxx..x...........xxx...x:....x..:..x.-----.:.::.:.....x... 13M2I28M3I23M1D16M3D19M1D67M1D177M12I14M5I50M5D16M 328/423 77.5% 445/94230402 0.0% 33/423 7.8% 14159077 NA +3062 chr4 + 190214555 35891714 35891713 35891801 88 AGATGGAAAGAAAAAATAGCAATGAACTTTTAAAA------------ACACAAAACAAACAAAAAAAATCCAAGAGTTGATTCTTCTGATTTTTATTCTA chr4 - 94230402 19908593 19908592 19908692 74321711 74321710 74321810 100 AGAAACAAAACAAGAATATATATGTATTTTCTGAATTACAATAATATACATAAAATATACAAAAAAATTCAAAGATTTGATTCTTCTCATTTTATTTTTA ...x:x...:x..:....xxx...x.:...:x:..------------...:....:.x.........x..x....x...........x.....xx..:.. 35M12I53M 64/88 72.7% 100/94230402 0.0% 12/88 13.6% 15983121 NA +3573 chr4 + 190214555 35894695 35894694 35894794 100 TACAGACATGAAAAACAATCTAAAACCCAGAAGTTAGATTTTGAAAAAAAAAATAATAAAATAGAGAGACCGCAGCTAAACTAATAAAGAGGAAAGGAGA chr4 - 94230402 917274 917273 917368 93313035 93313034 93313129 95 TATGGAGAGAAGAAAAGTTTTAGTACCCGG----TGGCTGTTGGGAAAAAAAAAAA-AAAAGAGAGAAACCAAAGCTGAATTAATGAAAAGGAAAGGGGA ..::..x.x:.:...x:x.:..:x....:.----.:.x.x...::........x..-....x.....:...:x....:..:....:..:........:.. 30M4D22M1D43M 67/95 70.5% 95/94230402 0.0% 5/95 5.3% 34977421 NA +12666 chr4 + 190214555 35910458 35910457 35910779 322 ATTACTTAAGTTACAAAACAAAGAGAAATTTCAGCATGCAAAATTGAGCCTAAATCCACAATTAAA-ATGGAAAAATGATTAACAAACCTATCATATGTAATGTTTATAAACCTTTTCAAAAGGTTTGGCTATGCAGAGAACAAACGTATAGTGGAAATAGACCTCTTATCTCTAGAAAACACATTTGTTAGGCTTAGAAACAAGATATAAATTAAGTATACCATTGCTGCAATGAAAAAATACAATTGTTGCTTGAAA-------ATTTCATTAAATTGTAAATAAATTG--GAGTTAACCCGTGAGTTGATTATTTATCTCAGGAATGTG chr4 - 94230402 21729216 21729215 21729538 72500865 72500864 72501187 323 ATCAAATGAAGTAAATAACAATCAGGGTTGCTGGCATGCAAGGCAGAGGCTA------CAATTAAAGAAAGCAGTAACATGAACAAATAC-TCATAAGTAATGTTCATAAACCTTTTAGGAAAGTTCTGCTATGCAAAGAATAACTG-GTATTAGAAACAGACCCCTTATCTCTGGAAAACACATTTGTTAGGCTTATAAACAAGATATAAATTATGTATACTCTTGCTGCTGTGACAAAATACAACAAATACATAAAAAAACCACATTTCATTAAATTTTAAATAAATTGCCTTTTTAACTCATGAGGAGA-TGTTTATTTTAAGAGTTTG ..:.xx.:.:x..x.x.....xx..::x.x:::........:::x...x...------........-.x:.x.:x.xx..x......:x:-.....x........:...........x::..:...:x........:....:..x:.-:..x.:....:.....:.........:......................x.................x......:x.......x:...x.........:x:x.:.x.:...-------.............x...........--xxx.....:.:....xx..-.:.....:.:.:..:.x.. 52M6D8M1I23M1D56M1D111M7I25M2I19M1D19M 234/313 74.8% 323/94230402 0.0% 19/313 6.1% 14181242 NA +3380 chr4 + 190214555 35922626 35922625 35922670 45 TTTTTTGCTGTTGTTGTTGTTTTTTCTTTTTTTTTTTTCCCCATA chr4 - 94230402 66916768 66916767 66916812 27313591 27313590 27313635 45 TTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTCATA .......:...............:.x......x.......:.... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -30994142 -63236260 +10093 chr4 + 190214555 35965266 35965265 35965691 426 CAGGCTTATGTAATGTTAATGCATTTCTATTTTATTTT----------CCAATATACTTTGGTTTAAATATTAATTTTGGAAAAAAGTTACCAATGTAGCATAAAA--ACGTAGCTTTTTAAAAATAAAAGC----ATCAACAAAGACTAAAGAAAGCAGGATATTGTGCCAAAAAGAGACTTTAACAACTGTGTCATGGTCACAGAAGCCTGCTGTTTAAAAATTGATTTTTAGTTTGAAAACATTACTGGCAGGACCAGGAGTATGCAAAACATATTCTCTCATTAACAGAGCTGCTCTTTGGAGCATAAATGCCAAATGTTTCAAATTAAGGACAAAGAA-TACTTTGAGCCTTAGAATAATGTGCTGTAGAGCT-GAAAGTATATAAAATT----GTCTCCAACTAATATTTTCCTAAGCAAAAATATTTATA----AAACTATAAAA chr4 - 94230402 21743000 21742999 21743421 72486982 72486981 72487403 422 CAAGCATACGCACCTTTAATATACCTCTTTTTTTTTTTTTTTTTCTTTCCAATATACTTTCAGTTAAATATTAATCTGGTGGAAAAGGTAACG-TGTACCATAAAGCGAGGCAG------AAAAAAGAATGCTATCATCAACTGTGAGTGAGTAAAACTAAAGTTTGTGCCA----GGGAGTTTAATAGCAGTACAGTGGTCACAGAAGCTTGGTGTTTAAAAATTAATTTCTAGTTTGAAGCTGTTACTGGCAGTGCCAAGAGCATACAAAGTACATTTTTTCATCACTAGTGCTAGT-TTCAGAGAAGAAA---------ATTCAGGAGAAAGACAATGAAGTATGTCCAGTTTCTAAA---------ATAGATCTGGGAAATATTTAAAATCTCCAGGCTGTGAAAAATAGTTTTCCACAAAAGAAGAGCTAAAGGGCAAATTAGAGAA ..:..x..:.:.x:x.....::.::...x....x....----------............x:x............:.x.x::.....x..x.:-....x......:--.x.:..------.....x:..x..----......x:x..x.:.:x...:.x::.xx........----.:..x.....:.:.x..::x:.............:..x............:....:.........:x::..........x:...:...:..:....::.:...:.:....:.x:..x...:x.-..::...x.x...---------x....::xx..:.....x...-..:x.:x..::.:x:..---------:....x..-.:..:...x......:----.x..x::.xx....x...:.:.x:x..:..x.x:..x.----...:..x.:.. 38M10I45M1D12M2I6M6D12M4I36M4D123M1D13M9D21M1I17M9D8M1I16M4I38M4I11M 273/396 68.9% 422/94230402 0.0% 56/396 14.1% 14222266 NA +3034 chr4 + 190214555 35973214 35973213 35973289 76 GAAAGGAAGGAGGAAGGGAGGGAAGGAAAGGAAAGGGAAGGAAGGAAGGGGAGAGGAGGGGAGGGGAAGGGAGGGA chr4 - 94230402 51453165 51453164 51453240 42777163 42777162 42777238 76 GAGAGGAGGGAGGAAGGGAGGGGAGGAGAGAAAATGATGGAAAACATGGAGAGTAGGTAAGACAGTATGGTTGGGA ..:....:..............:....:..:...x.:x:.:..:x.x..:...x:.:x::..x:.x.x..xx.... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -15479951 -78750451 +3030 chr4 + 190214555 35973260 35973259 35973320 61 AGGGGAGAGGAGGGGAGGGGAAGGGAGGGAGGAAGGAAAGGAAGGAAAGAAGGAAGGAAGG chr4 - 94230402 87012026 87012025 87012086 7218317 7218316 7218377 61 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG ....:....:.x...:..:.:....:...::.::..:..:.:.x:......::..::..:. 61M 40/61 65.6% 61/94230402 0.0% 0/61 0.0% -51038766 -43191636 +3065 chr4 + 190214555 35997070 35997069 35997129 60 TGCTTTGAATGATCTTTTTTTCCTTTTTTTTTTTTTTTTGTAAGACAGCTTCTTGTTCTG chr4 - 94230402 52874484 52874483 52874543 41355860 41355859 41355919 60 TGCTGTGGATTAATTTTTTTTCCTCTTTTGTTCCTTTTTTGAAGGCAGTTTCTGGGTCTG ....x..:..x.x:..........:....x..::.....xx...:...:....x.x.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -16877414 -77352988 +15349 chr4 + 190214555 36004344 36004343 36004944 601 CATTCATCTTGCATAATATTCCCTCTCTGGTAAGATTAGTTGATAACACAAGAGAATTTTCCCTAGCTTTACCTGACAAAAACTTGATACATCTTCTAGCAAGAGCAATTTTTCTACCATATTCAGCAATAGTAGTTTCTGAAGGGCTCTCTTATCTCATTTCTTATTCATCAATCTCCAAAAGACATGTTAGAAATAGCAAAATGTAAATCTCTTTATAACAAAATTAATCCAAT--TTTTTTACTTGTCTTTCATGTGACACTGACTCATTGTCAGCTGAACATATGTAACAAATGCTTGTCATTTCTGAGTACTCAAAGAGCACGATCTAAAAGAAAGATAATTTCTTTTGACAAATGTATGTCAACACA-AGGAACTACCTTTTTTGCTTATGATTCACTTGTCATGTCATCT----TTTAAAATTAATACTTATCCACAGT-----TTATGGA-GGAAGACTATGATAGTCACTTTATATAATTATGGTTCTGAGGAAGCATA-TTTCCTTGAGTTTCTCAGTTTAGCATTTTGTCAAAATGGATAAGAAAAGACACATAACTCTATACTCTCATATTT--------TTTCTTAAAATATT-CCTATTAACATACAAAT chr4 - 94230402 21760509 21760508 21761109 72469294 72469293 72469894 601 CATATATTTTACAAACTCCATTTTCTCCTGTGAGTGAAATTAATAACAAAAG-GAACTTTCTTTGGGTTTACCTGTTAGACACATAATACATATTTCAGTAAGCAGAATTTTTCAACCTCATTCTACAACAGTGACTTCAGAACGCATTACT------ATTTCTAATTCATCAGCCTTGTGGAGATAAGTTAGAAGAAATAAAATGTAAATCTCTTTATAACAAAATCAATCCAGTTCTTTTTCATTTGTCATCACAGTGACAAAGCTCTATTGTCAGCTGAACAGATGTACTAAATGCTTGTCACTTATGTGTGTTAAAAGAGCAACCACTAAAA-AGAGATAATTTCTTCTGACTAATTCACATCAAAGCAGAAGAGTTGTTCTTCTCTTTAGTAATTTCCTTGG-ATGTTTTGTTTGCTTTATACCAGATATGAACTTTTAGTACCTCTGATAGATGGAAGAATTAGGAATGCATTACACCTTTTCA-AATTCCACAAACCCATAGCTTCTTTTATGCCCTCATTTTATCTTTATATCAAAATGCA-------------GTAAGTTTATGGTCTCATAATGGTAGAATAGTTGCTAAAATATTCCCCATTAAAATGCAAAT ...x:..:..:..x.x.x:x:::....:x..:..xxx.:..:......x...-...:....::.:.x........x:.:.x..x.:......x..::..:...x:x........x...x:....x:...:...:::...x...x.xx.:x..------......x........::..:xx::...:.x.......:x.::...........................:......:.--.....:.:.....x.:xxx......xx.x:::...............x.....x:............:..x..x..::.x........xxxx......-.:............:....x...x:.::....x:..-.:..::.::::..:.:x:.x:.:...:x....x-....:x.x.----....x.x:x:...:xx.:::x:...-----.x..:..-......x.xx.:x.xx..:.x:.:x.xx.:.-::...::x::.xx....-:...:..x.xx::....x....x.x..x.:........x.-------------:...x.:...:x.......x.x--------x..x:.........-..:.....x..:..... 52M1D99M6D78M2I98M1D36M1I33M1D9M4I25M5I7M1I31M1D17M1I40M13D22M8I14M1I17M 388/578 67.1% 601/94230402 0.0% 46/578 8.0% 14243835 NA +3006 chr4 + 190214555 36014228 36014227 36014308 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x....:...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -844066 -93386336 +3607 chr4 + 190214555 36014230 36014229 36014397 168 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGTAAGTAGCA chr4 - 94230402 29503819 29503818 29503986 64726417 64726416 64726584 168 AAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGC-AAAGGATGAAGAAGAATGTAGGCTGCA ...::.:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x.x..:x:.x:.x.::x......:x.xxx.:..xx.-:..:..x.:..x..::..xx.::...xxx...:x-....:.x...::.:......:.:x... 106M1I34M1D27M 98/167 58.7% 168/94230402 0.0% 2/167 1.2% 6510411 NA +3107 chr4 + 190214555 36014270 36014269 36014387 118 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAA-----GAAAGAAAGAAAAT chr4 - 94230402 45355412 45355411 45355538 48874865 48874864 48874991 127 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAAT .::......:.x.x.:.x.xx.::.:.x..:::..:x...::...:...x..x...x.........x.::x..:.::x..:.:::...x....----.x.:.....:.-----...::.:...:... 93M4I11M5I14M 74/118 62.7% 127/94230402 0.0% 9/118 7.6% -9341142 -84889260 +3191 chr4 + 190214555 36014295 36014294 36014383 89 AAGAAGAGAAGGAAGGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858288 36858287 36858376 57372027 57372026 57372115 89 AATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.x.....:x.:xx..x.....x...:....:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -843993 -93386409 +3075 chr4 + 190214555 36014307 36014306 36014389 83 AAGGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGT chr4 - 94230402 36858304 36858303 36858386 57372017 57372016 57372099 83 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGT ..x.....x...::.............:.x..x.:xx..::::::...:.:..x..::.x..::.......:.:xx.:x.... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% -843997 -93386405 +13938 chr4 + 190214555 36042200 36042199 36042511 312 AATAGGTGGCTTATATTTTTTCAACATGTGGCATATGAAAATAAAACATTTGCAATCCT-ATTTCACATGCACATTAATTATGTAAAATTAGAAGCACTAAGGGTAGGTCATTAAGTGCTGATTAGACAATAATATTATGTGTTCTCGCAGCATTGGTAGTAAGGAACT--ACGTTTACTTCCAAAGGGCGGAAAGATCATTAAAATTTTAATTTGTTTCTCAACAGTTCAATTATAAAATGCTTAATGTGATGGACTTTAACCTTATGGGACTT-AACACAATTATGGGACTGTTCCAGTATACCTTGCTCTCTT chr4 - 94230402 21771391 21771390 21771705 72458698 72458697 72459012 315 AATAGCTTGCCTGCACTATT-CAGCATGTGGCGTATGAGCACAAAATATTTACAAGGGTCATTTTACGTGCACATTAATTATGTAAAATTAGAGACTCCAAGAGAGAGCCATTAAGTGTAGATTAGAAAATAAGACCAAGAATGCTAGCAGTGCTGATAATAAGAAACCCAGAGTTTACTTCCAAAGGGAAGATAGTTCATTAACATTTTAATTTGTTTCTCAACAGTTCAATTAAAACATGCCTAATGTACCGGACATTAACCTTTGGGGGCCTGAACCAAACTGTAGATCAGAGTAAAATGACCTTACTCTTTT .....x.x..:.::.:.x..-..:........:.....:x.:....:....:...xxx.-....:..:.........................::.x.:...:.x::.:.........:x.......x.....x.::.x.x:.x..x....:::..:..:....:...:--:x................x:..x..x.......x..............................x..x....:......:x:....x........xx...:.:.-...xx..:.:.:.:x.x.xx:x.:xxx.....:....:.. 20M1D38M1I109M2I104M1I40M 229/311 73.6% 315/94230402 0.0% 5/311 1.6% 14270809 NA +3115 chr4 + 190214555 36043812 36043811 36043866 55 AGGGAAGGGAAGGGAAGGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGGGAGGGGA chr4 - 94230402 92619648 92619647 92619701 1610702 1610701 1610755 54 AGGGACGGGATGGGGACGG-AGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGA .....x....x...:.x..-....:.x.:....:....x......:......... 19M1D35M 44/54 81.5% 54/94230402 0.0% 1/54 1.9% -56575836 -37654566 +3387 chr4 + 190214555 36043819 36043818 36043915 97 GGAAGGGAAGGGGAGGGGAGGGGA---GGGGGGAGGGGAGGGGGGAGGGGAAGGGAAGGGAAAAAGGGAAAGGAAAAAGGGAGAG-------GGAAAGAGAAAGAAA chr4 - 94230402 9237677 9237676 9237783 84992620 84992619 84992726 107 GGAACAAAAGCTCAGCTGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAA ....x::...xxx..xx.......---:.x.....:.:.:..x:.x...:::::.....:.....:.....::...........x-------:..x:.:........ 24M3I58M7I15M 67/97 69.1% 107/94230402 0.0% 10/97 10.3% 26806142 NA +3186 chr4 + 190214555 36043835 36043834 36043893 59 GGAGGGGAGGGGGGAGGGGAGGGGGGAGGGGAAGGGAAGGGAAAAAGGGAAAGGAAAAA chr4 - 94230402 88698852 88698851 88698910 5531493 5531492 5531551 59 GGAGGGGGGGGGGGGGGGGAGAATGGGGGGAAGACAAAGGGAAAGAGATAAAATAGAAA .......:......:......::x..:...:.::x:........:..:x...:x.:... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -52655017 -41575385 +3133 chr4 + 190214555 36043868 36043867 36043922 55 GGGAAGGGAAAAAGGGAAAGGAAAAAGGGAGAGGGAAAGAGAAAGAAAAAGAGAA chr4 - 94230402 55458164 55458163 55458218 38772185 38772184 38772239 55 GGGGAGGGAGGATGGGAAAAGAGGAGGGGAAAAAAAAAGACAGAGAAAAAAAGAA ...:.....::.x......:..::.:....:.:::.....x.:.......:.... 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% -19414296 -74816106 +3782 chr4 + 190214555 36043878 36043877 36043955 78 AAAGGGAAAGGAAAAAGGGAGAGGGAAAGAGAAAGAAAAAGAGAAAGAAAGAGA--------GAAAGAAGGAAAGAAAGAATTGAA chr4 - 94230402 7739259 7739258 7739344 86491059 86491058 86491144 86 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAA .:.......::x.:.:...:.:......:.:.......:...:..x.x.:...:--------....:..::...:...:....... 54M8I24M 57/78 73.1% 86/94230402 0.0% 8/78 10.3% 28304619 NA +9022 chr4 + 190214555 36052037 36052036 36052414 378 GTTAGAACAGTTC----ATACCTGAAAAATAGAGCAAGT--TAAATTAATGAACTATGAAAATTTTCTGAAAGTTAAATGTTGAACATCCAAGTAGAGTCATTAAACTTGTAAATAG--AAATAACAA-ACAATAAAATGC--------GACATTTATTAGGAAAAATATACATATCAGTAATATGGTAATTTGAATAGGAATATAAAAGTAAAATTGCCAGGAAACACAAACATTAATAACTTTTAATTAGAACGCATTGGAAAGGAAG-TAGGAATGAAAGAAGCAAGTTATTGAACTTATTCATAAAGAGCAAACCTAAATTTATTCTAAGTTGTTAGTGTTCACATAGTCTGCAGCAGTGGACAAATCAATGTTAATTGAGTTCTAAAGCAA chr4 - 94230402 21777757 21777756 21778122 72452281 72452280 72452646 366 GCTTGAACAGTTCCAGTGCAGCTGAACAAGTAAACAGTTACTAAATAAATGCACCCAAAAGC-------AAAGTTAAATGCAGGGCACCAA----------TCACAGGTGTAAACAGCTAAAGCACAGTAAAGTTAAATGCTAATGGCTAATGCCTGTTTGAAGAAAT-TATATTTCAATCATGCTGTAATTTGAATAAACTTATGAAACAAAACTAGT---GAAATACAT-------TAACTTTTAAATGGAACATATTGGAAATGTAGATAGCAGAGAAAGTGACGAGTTATAAAACTCATACATACAG--CAAACCTCAATTTATCCTGAGCTATTAGTTCTTAAATATTCTGCAGTACTGGACAAGCCACCGCTAATTAAGTTTTGAAAAAA .:.x.........----::.x.....x..xx:.:..:x.--.....x....x..:xx:..:x-------...........:x.::..:.x.----------.:.x.xx......:..--...xx...:-.x.:.x......--------:.::::.:..x.:.:....-..:..x...:.x..::x............::xx...:...xx...x.x.:---....:...x-------..........x.:....::........x.x..-...x.:x.....x::.:......x:....:..x....x..--.......x.......:..:..:.:.....x:.:.x...x.......:.x.......::..x:.:.....:....:.:..:x.. 13M4I22M2I21M7D22M10D16M2I9M1I12M8I19M1D50M3D9M7D32M1I40M2D83M 243/348 69.8% 366/94230402 0.0% 48/348 13.8% 14274280 NA +8760 chr4 + 190214555 36052037 36052036 36052414 378 GTTAGAACAGTTC----ATACCTGAAAAATAGAGCAAGT--TAAATTAATGAACTATGAAAATTTTCTGAAAGTTAAATGTTGAACATCCAAGTAGAGTCATTAAACTTGTAAATAG--AAATAACAA-ACAATAAAATGC--------GACATTTATTAGGAAAAATATACATATCAGTAATATGGTAATTTGAATAGGAATATAAAAGTAAAATTGCCAGGAAACACAAACATTAATAACTTTTAATTAGAACGCATTGGAAAGGAAG-TAGGAATGAAAGAAGCAAGTTATTGAACTTATTCATAAAGAGCAAACCTAAATTTATTCTAAGTTGTTAGTGTTCACATAGTCTGCAGCAGTGGACAAATCAATGTTAATTGAGTTCTAAAGCAA chr4 - 94230402 21774955 21774954 21775320 72455083 72455082 72455448 366 GCTTGAACAGTTCCAGTGCAGCTGAACAAGTAAACAGTTACTAAATAAATGCACCCAAAAGC-------AAAGTTAAATGCAGGGCACCAA----------TCACAGGTGTAAACAGCTAAAGCACAGTAAAGTTAAATGCTAATGGCTAATGCCTGTTTGAAGAAAT-TATATTTCAATCATGCTGTAATTTGAATAAACTTATGAAACAAAACTAGT---GAAATACAT-------TGACTTTTAAATGGAACATATTGGAAATGTAGATAGCAGAGAAAATGATGAGTTATAAAACTCATACATACAG--CAAACCTCAATTTATCCTGAGCTATTAGTTCTTAAATATTCTGCAGTACTGGACAAGCCACTGCTAATTAAGTTTTGAAAAAA .:.x.........----::.x.....x..xx:.:..:x.--.....x....x..:xx:..:x-------...........:x.::..:.x.----------.:.x.xx......:..--...xx...:-.x.:.x......--------:.::::.:..x.:.:....-..:..x...:.x..::x............::xx...:...xx...x.x.:---....:...x-------.:........x.:....::........x.x..-...x.:x....:x::::......x:....:..x....x..--.......x.......:..:..:.:.....x:.:.x...x.......:.x.......::..x..:.....:....:.:..:x.. 13M4I22M2I21M7D22M10D16M2I9M1I12M8I19M1D50M3D9M7D32M1I40M2D83M 241/348 69.3% 366/94230402 0.0% 48/348 13.8% 14277082 NA +3221 chr4 + 190214555 36056670 36056669 36056722 53 ACTATTGTTTTCAGTGTGACCTGTTTTTGTCCCTTTTTCTTTTTTTCTACTTT chr4 - 94230402 69589096 69589095 69589148 24641255 24641254 24641307 53 ACTTCTATCTTCAGTGTGACCTTTTTTTGTTCCTTTTTTTTTTTTCATTTTTT ...x:.:.:.............x.......:.......:......:x.x:... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -33532426 -60697976 +6632 chr4 + 190214555 36073676 36073675 36073864 189 AATCCTAACCTACCTCAATATTTTTCCGGGCCAAGGTTGCATTCCCCTCATGCTGTATAGGAATCAGAGGCAAACCTCCAATTTTGGGATTTTTGGTTATTGAACGTTTTCGTTCCTTTCCAGCTGGTGGCCATATATCATATTCATGCTGTGG---AAACACAATTTCTTGCTGTTGGTGTGTGATTTTAT chr4 - 94230402 21787880 21787879 21788068 72442335 72442334 72442523 189 AAACCCTACTTACTTCTGTACTTCCTCTGATTTTACAAGTGTTCTTCTCTTGTTGAATGGGAATTAGTTGTAAACCTCCAATCTTTGGACTTTTAGTTATAGACTGTTTTCTTGCTTTTCCAGCAGGCGGCCATATATTG---GCATGCTGAAGAACAAAAAAAATTCCTTATTTTTGGAGTGCAAATTCAT ..x..:x..:...:..x:..:..:::.x.:::xx:xxx.::...::...x..:..x..:.....:..xx.:...........:..x...:....:.....x..x:......x.x.:........x..:..........::---x.......x:.---...x.x....:...::.x....x...::.x..:.. 140M3D11M3I35M 125/186 67.2% 189/94230402 0.0% 6/186 3.2% 14285796 NA +5897 chr4 + 190214555 36083350 36083349 36083471 122 TTCCCTTTCAAACTTTACCTTGTTGGAGGCTTCATTTTCTTTTTCACTCCACGATAAAACTTCATGGAACTGAGAGAAAACATCTTGTCATGTTTACTACTCTGTAAGGTAAAAAAATAATT chr4 - 94230402 21795482 21795481 21795603 72434800 72434799 72434921 122 TTTCTTTTTTATTCTTACTTTGTTGGCGGTTTCATTTTCTTTTTCACTCCAAGATAAAGCTTCAGTGAATTGACAGGCAACACTTTTTCAGGTTTGCTAGCCTGCAAATAAAGATTTTAATT ..:.:...:x.x::....:.......x..:.....................x......:.....xx...:...x..:x....::..x...x....:...x:...:..:xx..:.xxx..... 122M 89/122 73.0% 122/94230402 0.0% 0/122 0.0% 14287868 NA +7140 chr4 + 190214555 36091874 36091873 36092028 155 ACTATACCTTCACATCCTTGTAAAGAAAGAGAAACCCATCTCGTAAAACAAAATACCGGTCTTGAAACTTATTTCCAGATAGTATTTTGGATGGTTCTTCTTTGATTTTCAAGATTCCTTCTTTGATGCTTCCCAGTGTACTCCGGTCTGTAAAG chr4 - 94230402 21799211 21799210 21799365 72431038 72431037 72431192 155 ACTGTACCTTCATATCCTTGTAAAGAAGCAAATTTCCTTCTCGTAATACAAAATAACGCTCTTGAAACTTGTTTCCAGACAGTAGTTTTGAAGGTTCTTCTTTGTACTTTAGATATCCAGCTTTCACACTACCTTTCACATTTCTCTCTATCAAG ...:........:..............:x.:.xx:..x........x........x..x...........:........:....x...x..x............xx:..:.::xx...xx....x.::..x..:xx:::.:.:.xx...:.x... 155M 112/155 72.3% 155/94230402 0.0% 0/155 0.0% 14292663 NA +7716 chr4 + 190214555 36107547 36107546 36107700 154 TGAAGTAATGACACCTACCACTGCAGTGTTTAATTGTGTCAGCGGTTAAGAATCTCTTCACCACCAGGTAAGCAGAGCCAGGTTCAGCTAATGAACTCCACCGAAGCACCTGCTCCAGTACATTTTCCTTGTAGTGAAGAGGACGCTCTGTAAA chr4 - 94230402 21804710 21804709 21804863 72425540 72425539 72425693 154 TAAAAAAAAAATACATACCATTGTAGAGTTTCATCATGTCTGCTGTTAAAAATCTCTTTATTATCAGATATGCAGTGCCAGGCTCTGGTAGTGAACTCCAGTGAAGAACCTGTTCTAGAACATTCTCTGTGTAATGCAGTGGACGTTCTGGAGA .:..:x..x:.:..x.....:..:..x....x..::....x..x.....:........:.::.:...:..x....x......:..x.x..:.........x:....x.....:..:..x.....:..:x....:..x..x.....:....x.:. 154M 112/154 72.7% 154/94230402 0.0% 0/154 0.0% 14302837 NA +9379 chr4 + 190214555 36114057 36114056 36114320 264 TAAAAAAAATCATAACAAGATGTTAAGACATAAAAT-GTTTATAAAGTCTTGTCTTAAAGAGTACTTTTTACAGTATA----AGTAATTTAAGAATCCCTAGCATAAAAATCACTTACCTAGCTCTTCATTTTCAATGACTTCAAATGTGGCCCAAATATCACCTTTTGTAGGAATAATATTTTTTATCGCTAATATATCATTAGTTAATTCTTCTGCTTCCATCACAGGAGATATCTGTAAGAGAAGTAATATTTTTTCAAAAAACGT chr4 - 94230402 21811834 21811833 21812093 72418310 72418309 72418569 260 TAATAAAGTAAATAATAATATCTCTAATTATAAAAAAGTTTAATAACTCTT----TAAC-----CTTTTGATTGTATATTGAAAGATATTAAAAATTTAATGAATATGCATCACTAACCTAGTTCTCCATTTTCAAGTACTTCAAAAGTGGCCCAGATATCATCTTTGTTGGGAGTAATGTTTTTTATTCCTAAAATATCATTAGTTAATTCTTCTGCTTCTGTCAAAGGCGATACCTGTAACACAAATTAAATCAATTTATAATGCAT ...x...:xxx....:..x..x.:x.:x:......x-.....xx..x....----...x-----.....x.:x.....----.:x.xx....:...::xxx.x...x:x......x......:...:.........xx........x........:......:....xx.:...:....:........:x....x..........................::...x...x....:......x.x..:.x.x..:xx..:.x..x:.:. 36M1I14M4D4M5D14M4I187M 186/255 72.9% 260/94230402 0.0% 14/255 5.5% 14302223 NA +7130 chr4 + 190214555 36117045 36117044 36117176 132 CACCTTTAGA-ACTTACCCGAATTATAATACTACAGTCGGGTTCCTTCCTTTCTACATATACTTCAATTAACAAATCTCCAGCCTGGGAAACCTAGAAAAGGGCAGAGGTAGAAACAACACAGATAAACATAT chr4 - 94230402 21813142 21813141 21813274 72417129 72417128 72417261 133 CACTTTTATACACTCACCCTGATTATAATACTACAGTCTGGCTCCTTTCTTTCTACATAAACTTCAATCAGCAAATCTCCAGCCTGGGAAACCTAAAATAATACACAGTGACAATTAAAATAAGTCAGAATAT ...:....x.-...:....x:.................x..:.....:...........x........:.:........................:..x.:x:..x..xx.x..x:..x.:.::.x.:x.... 10M1I122M 103/132 78.0% 133/94230402 0.0% 1/132 0.8% 14303903 NA +6883 chr4 + 190214555 36119630 36119629 36119729 100 ATCTAACTATTACTACTCACTTGGGTGTCTTTCCACTTGGTAATAAAGCTATTTTCTATGTCCATTTGTTTGACTTGATCTTCTTTAACCTGTTTAAAAT chr4 - 94230402 21818987 21818986 21819086 72411317 72411316 72411416 100 ACTTAACTTTTACAACTTACCTGAGTGTCTTTCCATCTGGTAATAAAACTGTTCTCTATATCCATTTGTTTGACCTGGTCTTCATTTACCTGtttaaaat .::.....x....x...:..:..:...........::..........:..:..:.....:..............:..:.....x..x............. 100M 83/100 83.0% 100/94230402 0.0% 0/100 0.0% 14300643 NA +10046 chr4 + 190214555 36121168 36121167 36121368 201 AAAATAATTACCTCAAATATTTCTACATAATTATTAATTAGGTCCTCAATTACATTCACTTCTTCACTAGTTTGTCCCTTCGTTTGAAACAAACAGGATGAAAAGACCAAGGCCAAATTATGGGCATTCATGTGATTGATTTCTGAGCATTTCTGAACCCTGTCAGAGAAAAGCATAGTTTATTATGAT-ACACTTTTATTT chr4 - 94230402 21819869 21819868 21820070 72410333 72410332 72410534 202 AAGATACCCACGTCAAAAAGTTGCACATAATTTTTAATTAGATCTTCAATTACACTGACTTCTTCACTAGTCTGGCCTTTAGTTTGAAATAAGCAAGAAGAAAACACCAGGGCTAGGTTGTGAGGGTTCATATGATTGATTTCAGAACATTTCTGCACCCTGTTGAAGGAAAAATAAATATATTTAGATGATCCCATTATTT ..:...x::..x.....x.x..x:........x........:..:.........:.x..............:..x..:..x........:..:..:..x.....x....:...:.::..:..:.x:.....:...........x..:........x.......:::..:...:xxx.:.x....xx...-.:x.:x...... 189M1I12M 150/201 74.6% 202/94230402 0.0% 1/201 0.5% 14301299 NA +13815 chr4 + 190214555 36128527 36128526 36128759 233 TATTACCTAAAGCAGAGATCCAATATGGGTAGAGCTCCTTAGTAAGCAGTGCATCATCAATGTCAGAGAGAAAACTTTTCAACACAGCCGTCACATCTTCAAGCTGATGTTTTCCAGCCCTCAATTTAAAGCTTCTTGCATCCTTTTTGAAACTCTCCAGGAGTTCACTTATATGCAAAGGATCACCATTCTTTTGATAGATATATTTGCATCCTAAACCTTTGTTTAAAAAA chr4 - 94230402 21822603 21822602 21822835 72407568 72407567 72407800 233 TATTACCTAATGCAGAGATCCAGAATGGATAGAGTTCCTTAGTGAGAATTGCATCATCTATTTGAGAAAGAAAGCTTTTCAATACATCAGTCACATCTTCAAGTTGATGTTTTCCAGCTCTCAGTTTAACACTCCTTGCATCCTTTTTGAAACTTTCCAGCAGTTCAGCCACATTGGATGAATTGCCATTCTTGAGGTATATATGCTTGCTACCTAAACCTAGGTTACAGAAA ..........x...........:x....:.....:........:..x.x.........x..x.x...:.....:........:...x.x..............:..............:....:.....x:..:....................:.....x......x::.:..xx:.x.:..::........xx.:..x....::....xx.........xx...xx.:... 233M 185/233 79.4% 233/94230402 0.0% 0/233 0.0% 14305924 NA +15585 chr4 + 190214555 36133198 36133197 36133416 219 GGTTGAATAAAAACTCAGTGATACTTACCATACTGTGTAACAAATGCTATACAGCTGTTCACTATAATGGGAACGTCATTTTTGCTGAGCTGCTGATCTTGTAAAGCATTACCATCTGTACCTGCTGCTTTTTCAATTGCAGTATGCCAGACTGTGAAATCCAACTTGGTATGCCCATGGATGTATAATGTTCTGTAAAGTTTAAAAAGCATTTCAAAT chr4 - 94230402 21824832 21824831 21825047 72405356 72405355 72405571 216 GGTTGAACAAAACCT--ACTGTACTTACCATACTGTGTAACAAATGCTATACAGCTGTTCACGATAATAGGAACATCATTTTTGCTGAGCTGCTGATCTTGCAATGCATTACCATCTGTACCCGCTGCTTTTTCAATTGCAGTATACCAGACTATGAAATCCAGTTTCGTATGGCCATGAATGTACAGTGTTCTGGAAAGTTT-AAAAGTGTTTTGAAT .......:....x..--::x:.........................................x.....:.....:..........................:..x.................:......................:.......:.........::..x.....x.....:.....:.:.......x.......-.....::...::... 15M2D186M1D15M 190/216 88.0% 216/94230402 0.0% 3/216 1.4% 14308366 NA +4160 chr4 + 190214555 36147291 36147290 36147372 82 CTTACCTCCCTTTTTCTACCAAGAGTAAAACATCCAGTTTTTCCCCATTTTGAACCATTGTGCTGATTGCTGAAGGGAGAAT chr4 - 94230402 21831024 21831023 21831105 72399298 72399297 72399379 82 CTTACCTTCCTTTTTCAACAAGCAGCAGTACATCTATTTTTTCTCCATTTTGCATCACGCTACTGATTGCTGAAAACAAAGT .......:........x..x.:x..:.:x.....:.x......:........x.:..:xx.:............::x.:.:. 82M 60/82 73.2% 82/94230402 0.0% 0/82 0.0% 14316267 NA +12687 chr4 + 190214555 36147507 36147506 36147932 426 AGAAAAGTGTTCCAAAGATAAGGGAAGAAAAAAGCTCTTACTTAGCTCTTGCAGTCTTCTTAAGTGCATTCTATCTCCCTGAACTTCTTGCATTTGAAGGCAAAAATGCAAGCTGGATTTGTCCATAGCAAACCAGCCTTTTCTCCACTGATCCAGGGCATGGCAGTCTTTGTAGAAGAGTTGACCAATCAAATCATAGTCAGCTTCTGTTAAGTTTTCAGCAAATAAGGGAACAAAATGCTGTTAAAACAAATACAAAAAAGTAATAAAGACAGTGAAAATAGGAAATCCCTTCCCTATCTACTGATATGAGAGAAGGTAGACAAATTATCTTAGTTTTTCAATTTTAAAGATTCAAAGGTAA------CACCAAATTCAAAACAACTAAACTTGCTATCAGTCTTAAAACTGAACAACTATAATGCATTT chr4 - 94230402 21832678 21832677 21833070 72397333 72397332 72397725 393 AGTAGAGTATTTCCTGCATTCTAGATAAGTAAAATTCTTACTTAGTTCTTGTAGCCTCCTTAGATATATGGAATCTTCTTGAGCATTCTCCATTTCAAGACAAAAATGAAGGCTTGACTTTTCTATAGCAAACCAGCCTTTTCTCCATTGATCCAGGTTATGGCAGTCTTTGTAGTACAGCTGGCCAATCAGGTCACAGTCCCTCTCTAATAAGCATTCAGCTACAGGGGGAACAAAATGCT-----ACCAAACAAGACAGGGTGAGTTAGAT--TAAAAAAAATAACCTCGTTCCCTA--------------AAAAAATAGACA------------TTGCAAACCTGTAAGGTTAAAAGATGAAAGCTGCACAAAAT--AAAACTTCTCAGATT--TATCACTCGTAAAACTATATA--CACATTACATTT ..x.:...:..:.xx:x..xxx:..x:.:x...::..........:.....:..:..:....::.::..xxx....:.:...:.x.::.x.....x...:........x.:...x..:..x..:.......................:.........x:................x.x..:..:.......::...:....xx::...:x....:x......x.xx::..............-----.x....:.x:.x.::..:.xxx...:--.:....x.:x..x::.x.......--------------.:..::......------------..x:x..::.xx...:..x....:.:.------...x....--.....xx..x.:x..--.....x..x.......:x.:.--:.:.x.:..... 242M5D26M2D24M14D12M12D27M6I8M2D15M2D21M2D12M 271/387 70.0% 393/94230402 0.0% 45/387 11.6% 14314829 NA +7351 chr4 + 190214555 36148369 36148368 36148568 200 CTCTGGATTTAGAGCAGTAACATAATATTTA--AATACCTTGGCTATTGCCTCTGTCCATTTTCTTTGAGCTTGAGATGTTTCAGCTCCAAATAAAAACACACGTTCGGAGGGTAAGTAGATCTCAAAGATAAAGATGGGCCTAAAACATGCACAAATAAAAAGATACTACCAGTTATATTTAGCTCTTAAGAAAATGAATA chr4 - 94230402 21834188 21834187 21834382 72396021 72396020 72396215 195 CTCTGGGCCTAACTAGAAAAGATGACAATCAGTATTACCTTAGCTATTGCCCAAGTCCATTTTCTTTGTGAATATGCAGTTTCAGCTCCAAACAGAAAAACACGTTCTGACATTAAATAGATTTCAAAGGTAAAGATGTCCCTAAAGCAAGCAGGAGGAAAAAGGT------AGCAGTATTTAG-TCTTCATAACAAGAACA ......:::..:xxx::x..x..:.:.x.:.--.x......:.........:xx..............x.xx.:x.xx..............:.:...x........x..x:x...:.....:......:........xx......:..x...x:.:x......:.------..:x:.......-....x.x..x.x...:. 31M2I133M6D12M1D17M 139/193 72.0% 195/94230402 0.0% 9/193 4.7% 14314181 NA +8135 chr4 + 190214555 36150806 36150805 36151074 269 AACTAAAGAACTAAAATGATAACAAAACTCTCATTACCTGTTATAATTATCTGAAAATACCT---TTTACCTCCT-AATTGTGTAATGACAGACCTACCCAGTATTTAAATAGAAGTCCTCTTTGTGTATAGCCAGGCAGATAACTTCATTGATATTAATGGTGCCATTAGGTGTGGTAGACTTATCATTTTCATAGTAACTCAAGAAGCCTCCTTCCAAAACACACCATTTTTTATTTGTCTCTAAGAATTTGAAACAAAACAAATAACAAA chr4 - 94230402 21836620 21836619 21836879 72393524 72393523 72393783 260 AATTCAGGAAC-AAAATGATAG----GCACTGAAAACCTATAATAGAAACTTGGACATGTCTAAATTTATTTGCTGAATTATTAACTTTGGAACATACCCTCTGTTTAAAAAGTACTCCGAATTGTGCACTACAAGACAGATAACTTCGTTGATGTCAAGCATACCATTAGGAGTGGTAGCTTTATCATTTTCATAGTAGCTGAGAAAGCCACTTTCCAAAGTGCACCATCTTTTGTT--------GCAATCTGTGGTTAAAGAAATAATAGA ..:.x.:....-.........:----:.x..x.xx....:.x...:xx.::..:.x..::..---....::.x..-....:.xx.x.xxx::..x.....xx.:......x..x.x...xxx.....:.:x:.x..:...........:.....:.:..xx:.:........x.......x:.................:..x.::.....x.:.......:::......:....:..--------:x...:..x:::x...x......:.:. 11M1D10M4D36M3I10M1I162M8D27M 176/256 68.8% 260/94230402 0.0% 17/256 6.6% 14314186 NA +5393 chr4 + 190214555 36156238 36156237 36156536 299 TGCCACTGCATTCCAGCCTGGGTGACAGAGC-AAGAGAAAGAAAAAGGAAGGAAGGAAAGAAGGAAAGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGG-------GGG------AAAGA---------GAGAGAGAGA------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA----------------------------------------------AGAAAGAAAGAAAGAAAGA---GAAAGA--------------------AAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAGGGAGGAAGGAAGGAAGGAAGGAAAACAA chr4 - 94230402 32025259 32025258 32025655 62204748 62204747 62205144 397 TGTCACTGCCTGCCAGGGACTGTAACAGAGCTAAGATCAGGGGAAagagaaggaggaagggtgggagggagaaaaggaaaaagggagagaaggagagagagaACAAGAGGAAAAGAGAAAGGTAGAAAAGTCACGAGGTCTAATTGGGTATTACAAAGATTCTTCCAGGAGAAAGGGATTTTATATGCAAGATGCAAGGTGTGTTATTAAGAGGAAACATGCTGCTACAACACTTGTCTGACATATTGTTCCAGGTACCTCTGAGATAGGGTGAGGGGATGATTAAAAAGACCCACAAAACACATACACACAAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAGGTGGACCAA ..:......x.x....xxxxx..:.......-....xx.:.::....::.:.:.....:.:x..:.:.:..:..:.:.::.......:..:....:...:...x:....::.:.....:...x..::.:.xx:x....-------...------.....---------....:..:..------.x.x....x:x..:.x:x.xx.xx....:::..----------------------------------------------...x..::x..::.:.x..---:.....--------------------..:.x....x:....:.:x....:.........:....x........:.::xxxx....:.:x.::::x.....x.:.x::.x... 31M1I106M7I3M6I5M9I10M6I33M46I19M3I6M20I86M 194/299 64.9% 397/94230402 0.0% 98/299 32.8% 4130979 NA +3795 chr4 + 190214555 36156288 36156287 36156412 125 GAAGGAAAGAAGGAAAGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 40465775 40465774 40465899 53764504 53764503 53764628 125 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGA .:..:.::..x.:x.....x..:::....x..:..:.x.:..:.::.x..:x:x:...:...:..:.....:.:....:.:..:.:::.x....xxx..:.xx:..xx...:x..x.x.:..... 125M 74/125 59.2% 125/94230402 0.0% 0/125 0.0% -4309487 -89920915 +3202 chr4 + 190214555 36156347 36156346 36156418 72 GAGAGAGAGAGGGAGGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 33386347 33386346 33386418 60843985 60843984 60844056 72 GAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAGAAAGGGA .....x:.::..:x:........::.:x..:...:..x...:...x....:::..:...x:.:......::. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 2770000 NA +3568 chr4 + 190214555 36156347 36156346 36156406 60 GAGAGAGAGAGGGAGGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ..:...:...x..:...:...:.........:....:::.:...:.......x.x.:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -41029730 -53200672 +3271 chr4 + 190214555 36156358 36156357 36156424 67 GGAGGGAGGGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237694 9237693 9237760 84992643 84992642 84992709 67 GAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .::....x:x..x.:.:.:.....:x..x.:...:.....:....:....:..:...:....::... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 26918664 NA +3091 chr4 + 190214555 36156366 36156365 36156422 57 GGAGGGAGGGGGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 43294275 43294274 43294331 50936072 50936071 50936128 57 GGGGGGTGGGGGGAAGGGAGAAAGAGGAAAGAAAAAAAAAAAAGGGGGGGAAATAAA ..:...x.....:...:....:....:..::..:...:...:.::.:::....x... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% -7137909 -87092493 +3040 chr4 + 190214555 36156381 36156380 36156459 79 GAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....:.x..xx..x.....x...::...:.........:.x..-----....::....:..:::x.:.::x......::..:.. 43M5I36M 54/79 68.4% 84/94230402 0.0% 5/79 6.3% -701912 -93528490 +3000 chr4 + 190214555 36156388 36156387 36156493 106 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAG chr4 - 94230402 54827386 54827385 54827491 39402912 39402911 39403017 106 AGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAG ...:...:..:.x.......::.x...x....xxx.:xx.x:..x.:x::...:.:::x.:x..x::xx:....:.:....x..:.x.....:...:....x.... 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% -18670998 -75559404 +3122 chr4 + 190214555 36156388 36156387 36156493 106 AGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAG chr4 - 94230402 54828363 54828362 54828468 39401935 39401934 39402040 106 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAG ...:...:..:.x........:.x...x....xxx.:xx.x:..x.:x::...:.:::x.:x..x::xx:....:.:....x..:.x.....:...:....x.... 106M 65/106 61.3% 106/94230402 0.0% 0/106 0.0% -18671975 -75558427 +3036 chr4 + 190214555 36156407 36156406 36156511 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAGGGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:....x:xx:.x.:.:xx..x.::....:x.::::.x..x..:..:...x......:...::::..x:.. 105M 62/105 59.0% 105/94230402 0.0% 0/105 0.0% -25178294 -69052108 +3072 chr4 + 190214555 36156416 36156415 36156486 71 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAATGAAAGAGAAGAAAGAAA chr4 - 94230402 25066985 25066984 25067055 69163348 69163347 69163418 71 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA .....x...x....::..x:.x...:..x.::..x.::.::.:..:.......x:.....x......::.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 11089431 NA +11964 chr4 + 190214555 36159297 36159296 36159525 229 AAGAGACCAGGTTAATGAAGAGACAGTGACGAACCTGAGAATTTGTTATGGTAGAGAAATTCCATTTGCAGACTTTGCCCAGCTTTCTTGGCTAGCAGATAGGGGGTGCTATGCACGGGGTCTCCGGTGGCACACATGACATCTGCTCCACTGAACAGCAAAGCCATTGTTTCTAGAACATCCGGTTTCACTACAGCAGCACATAGAGCCTGGTCATTAAAAGAAAATA chr4 - 94230402 21842513 21842512 21842739 72387664 72387663 72387890 227 AGAAGATCAAAGCAAAGAGAAAATA-TATCTTACCTGAGAACTTATTATGGTAGAGGAATTCCATTTGCAGTCTTTGTCCAGCTTTCTTGGCTAATAAATATGGAGTACTGTAAACAGGATCACCAGTAGCACACATTACATCAGCCCCACTGAACAGCAGCATCAGAGTTTCTAGCACATCTTGCTTAACTACAGCAGCACACAGGGCCTTAT-GTAGAAAGAAAATA .::...:..::x:..x..::.:.:.-.:x.xx.........:..:...........:..............x.....:................::.:...x..:..:..:.:x..:..:..x..:..:........x.....x..:.............:x::..xx........x.....:x.:..x..............:..:....x:.-:.x:.......... 25M1D188M1D14M 171/227 75.3% 227/94230402 0.0% 2/227 0.9% 14316784 NA +3171 chr4 + 190214555 36160285 36160284 36160391 107 TGAATCCTTAAATGAAACAAGGGGGAAACCACTGAAATAATGTCACAAAAGGAAATAAAATAAAATTAATAATTTTGTCAGATAGTATAAAATTTTTTACTTTTTCT chr4 - 94230402 54746638 54746637 54746736 39483667 39483666 39483765 99 TGAGTCTTTGAAATAAACATTGCTGAAATGAGTCAGATAAATTCACATAAGAAAATAAAATCAAATTAATACTGTT----CATGGTAT----TTTCTTAATTGTTTT ...:..:..:..xx.....xx.xx....:x.x.x.:....xx.....x...:.........x.........x.x..----x..:....----...:...x..x..:. 76M4D8M4D15M 72/99 72.7% 99/94230402 0.0% 8/99 8.1% -18586353 -75644049 +9864 chr4 + 190214555 36160456 36160455 36160662 207 TACCTTATTTAATTCTTCTTTGGTGAGAGATGCCAAAAGAGTTTTTCTGAATTTTCCTTCTTTATATTTCTGAGTAATAAAGTTTTTTCTCTTTTCTACTGGTGAGTCCATATGTAATTCTTCATCCTTTTGAAGATTACCAGCCCAAAAGTCATTTGCTCTTTTGTTTCCAATGACAATAAAAAGCTGAATT--GTCAAAAAAAAAAC chr4 - 94230402 21845938 21845937 21846146 72384257 72384256 72384465 209 TACCTTATTTAATTGTTCTTTGGTTTTGTAGGGAAAAGGTGTTTTCCTGAATTTTCCCTCTTTGTATTTTTGTGTAATGAATGCAATCCTTTTCTCTGCAGGGGCATCCATGTGCAGCTCTTCATCTGGAGGAAGATTTCCTGCCCAAAAACTGTTCGCTCTCTTATTCCCAATGATGATAAAGAGCTGAATGAAGTTAAAGAGAAAAC ..............x.........xxx:x.x.xx...:.x.....:...........:.....:.....:..x.....:..xx:xx.:..:..:...:.x..x.x:.....:..:.::........:xxxx.......x..x........::::..:.....:..:..:.......::.....:........x--..:...:.:..... 193M2I14M 151/207 72.9% 209/94230402 0.0% 2/207 1.0% 14314518 NA +7696 chr4 + 190214555 36161459 36161458 36161581 123 ACTCACCTCGATGAGTTCATTGCTCCAAATGCTAGCATCCATTTTTAGACTTCTAACCTTGGAATCTTTTGGTCCTAAAGATCTATGCTGTCCTAGAGTCAAAACACAATTGCATTTCTATTT chr4 - 94230402 21846751 21846750 21846868 72383535 72383534 72383652 118 ACGTACCTCAATTAGTTCATTGCTCCAAATGCTGGCATCCATTTTTAAACTCCTGACCTTTGAATCTCTTGGTCCTAAAGATCGGTGCTGCCCTAG-----AAATCCAACAGCATTTTTACTT ..x:.....:..x....................:.............:...:..:.....x......:...............x:.....:.....-----...:x...:x......:..:.. 96M5D22M 99/118 83.9% 118/94230402 0.0% 5/118 4.2% 14314708 NA +20694 chr4 + 190214555 36164894 36164893 36165223 330 CATAACTTGTCACTAATTAC-----CTGCACACTTCTTACAGATGACAACACAGAGATTGATGGATGCCCAGTCAGGATCTGGGGCTTTACAATCTGCACAGCTCCTGTTGGATTCATTGAACCAAATCTTCTCAGCTACTTCATAATCAGAGAGAGTTTCTGCTATTGATTGCTGCACAGCTTCAATCCAGTCTTGTTTCTCCTTTTCAGTCTCGGCTGTAAAGCTGAAACAATTAACGTTTCTGTGTTATCGATCTCCCTTGTAAAGGCCAATTAAGCAGTATGTTCAGTTTGCATATTCATTTCACTCACAAATTAAACAACAGCTGAAAAA chr4 - 94230402 21847622 21847621 21847955 72382448 72382447 72382781 334 CACAGCCTCCCATTAATTACTCTACCTGCGCACTTCTTACAAATGACAACACAGAGATTGATGGATGCCCAATCAGGATTGGGAGCTTTACAGTCAGCACAGCTCCTGTTGGATTCATTGAACCAAATCTTCTCAGCTACTTCATAATCAGACAGAGTTTCTGCTATCGATTGCTGCAGTGCTTCAATCCAGTCTTGTTTCTCTCTTTCTGATTCTGCTGTAAAGCTGAAACAATTGACTTTTCTGCATTATTGATCTTTATTTTAAAGCCCAATTAAACAGAACCTGTAGTCT-CTTATTTATTACATTTATATCTGAAATCTCTGTGAAAAAA ..:.:.:.x:..:.......-----....:...........:.............................:.......:x..:........:..x........................................................x..............:..........xx.......................::....x.x:..x....................:..x......::....:.....::x..x.....x........:...x.:x.x:...:.-.x....:...x..:.:.:.xx.x...:xx.x.:x:..... 20M5I269M1D40M 272/329 82.7% 334/94230402 0.0% 6/329 1.8% 14317272 NA +8967 chr4 + 190214555 36166905 36166904 36167157 253 AACACAAAATGTT-----TAAAAATAG-------CTTACCTGAAACTCCTGTAGGGAGTGATTATTTCAAAAGATTGTTTCACAGTTCGGTCCACTTGCTTTACATTTGCTACATTCATAGGAATTATGGTAATACCAAGTCCACTCTTAAAATCCTAGTTTGGAGAAAAACATAAAA-----AACTATAAAGAAACAAAAAAAAAGATTTTGAAAGTATAATTACATT-------TTCTAAATTCCAATAA--ATTCTACCAAATTTTACAACAAAAT chr4 - 94230402 21849020 21849019 21849293 72381110 72381109 72381383 274 AATATAAAATATTACTGGTAATAATATTGAAGATCTCACCTGAAGCTTTTGTAAGGAGTAATTATTTCAAAAGATGGTTTTGCAGCCCGATCCACTTGTTTTACATTTGCCACATTCATAGGGATTAAGGTAATACCAAATCCTGTCTTAAAGTCCTA---TGGAAAAGGTAATTAAAGTTTGAGCAGTTATTATTCAATAGCAAACATGT--ACAGAACAATTAAATCAGCACAGTCCAAAAATCCAAGAACTGTGATACAAATTTTGGCAACAGCAT ..:.:.....:..-----...x....x-------..:.......:..::....:.....:...............x....::...::..:........:...........:...........:....x...........:...xx.......:.....---....:..::xx..x...-----.:.x:.x.xx.xx...x.:x...x..x.--.x..x.:.....x..:-------.:.x...x.....x..--:.xx...x..x...x:.....:x.. 13M5I9M7I124M3D17M5I28M2D16M7I16M2I25M 186/248 75.0% 274/94230402 0.0% 31/248 12.5% 14317885 NA +9345 chr4 + 190214555 36177818 36177817 36178051 234 AGAGCTCACCTGTTCGTTTTTGCAAAGCCACACACTGTTTCCACTTAACACAGTAAAAATTTTTGCCTTATAGCCTCTCAATTCAAGATATCCACATTTCTCAGGTGTAACAACAGCTTGAGACTGCGAGGTAAG---GGATTGTGATTTCAGTGCATTTAATAGTATGCTGATCCAGTCATTTCTCTCCTCTGAAAATGAAGACAGGAGAAAATACATAAATCCACATATAAGTTA chr4 - 94230402 21870561 21870560 21870789 72359614 72359613 72359842 229 AAAATTTACCTGCTCATTTTTGCAGATCCACACAGTATTCCCTTGAAGTAGAATAAAGATTTTGGCTTTGTATCCTTTCAGTTCAAGATATCCACTTTTCTCAGGAGCAACAGAAATTCGAGACTGAGGATTATTATCAGATTGAGATTTCACGGCATTGAGTATTTTATTAACCCAGTCATTCCTTTCTTCTAAAAAGGGA-----AAAAAAATAGACAAAGGT---TATAAGTTA .:.::.:.....:..:........:.x.......x.:..:..x:xx.::.x.:....:.....x..:..:..x...:...:..............x.........x.:....:x.::.:.......x.::x..xx---:.....x.......xx.....x.:..x.x.::.:.:.........:..:..:...:....x.:.-----:.:......x.:...xx:---......... 135M3I64M5D18M3D9M 161/226 71.2% 229/94230402 0.0% 11/226 4.9% 14307257 NA +7683 chr4 + 190214555 36187449 36187448 36187597 149 ACCTTCTTTTTCTACTCTAAAAACAAAAGTTCTTTGTGTTGTAACAACTTCAAATTTGTTGTCTCCTTGAACTCGTACTGTTGATATAGCAGAAAGGGGAATTATTCCTTTCGAATACATCTCCTGTATTGGTTAGAAAAAAAGAGAAG chr4 - 94230402 21879153 21879152 21879298 72351105 72351104 72351250 146 ACCTTCTTTATCCACTCGGAAGACAAAAGTCCTATGGGATGTAACAACTTCAAATTTATTCTCTCCATGAACTCTAACTGTTGCTATAGCAGAGAGTAGTATTATTCCCTTTGAGAATACTTCCTATA---ATAAAAACACAAAAGAAG .........x..:....x:..:........:..x..x.x..................:..x.....x.......xx.......x.........:..x:.x........:..:..:x.:.::....:..---:.x.:..x.x..:..... 128M3D18M 113/146 77.4% 146/94230402 0.0% 3/146 2.1% 14308296 NA +7683 chr4 + 190214555 36187449 36187448 36187597 149 ACCTTCTTTTTCTACTCTAAAAACAAAAGTTCTTTGTGTTGTAACAACTTCAAATTTGTTGTCTCCTTGAACTCGTACTGTTGATATAGCAGAAAGGGGAATTATTCCTTTCGAATACATCTCCTGTATTGGTTAGAAAAAAAGAGAAG chr4 - 94230402 21873046 21873045 21873191 72357212 72357211 72357357 146 ACCTTCTTTATCCACTCGGAAGACAAAAGTCCTATGGGATGTAACAACTTCAAATTTATTCTCTCCATGAACTCTAACTGTTGCTATAGCAGAGAGTAGTATTATTCCCTTTGAGAATACTTCCTATA---ATAAAAACACAAAAGAAG .........x..:....x:..:........:..x..x.x..................:..x.....x.......xx.......x.........:..x:.x........:..:..:x.:.::....:..---:.x.:..x.x..:..... 128M3D18M 113/146 77.4% 146/94230402 0.0% 3/146 2.1% 14314403 NA +3438 chr4 + 190214555 36187879 36187878 36187964 86 TCTTTAAAACAATCTGCTCAAAATGATTTTATGGTGTTTGCAGGCATCTGCTGGCCACAACAGGTACTGTAACTGAACCATTTTGA chr4 - 94230402 21880755 21880754 21880840 72349563 72349562 72349648 86 TTTCTAAAACTGTTAAGATACAATTATATTATGGAGTTTGCAGGCATCTACTGGTTGTATTTGGTACTGTAAGAGAATAATTTAGA .:.:......x:.:x:xx:.x...x..x......x..............:....::::.x:x..........xx...:x....x.. 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% 14307124 NA +5570 chr4 + 190214555 36193570 36193569 36193657 88 GTATTTACCTTCTCATTATTGTAGTAAGAAATGCTAAGGCCATCAAATTTCACCCATCTCTTTTGAAACATGCGTTTTCTGCAAAACA chr4 - 94230402 21883786 21883785 21883873 72346530 72346529 72346617 88 GCACTTACCTTTTCATTATTGTAGTAAGAAATGCTGTCTCCATCAAATTTAACCCAGCGCTTCTGAAACATACGTTTACTGTGAATCA .:.:.......:.......................:xxx...........x.....x.x...:........:.....x...::..x.. 88M 72/88 81.8% 88/94230402 0.0% 0/88 0.0% 14309784 NA +3119 chr4 + 190214555 36204990 36204989 36205072 83 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAGCAAACAAAAAAAT---CAACAATTATTATTTCAAGAAAAACTAAAC chr4 - 94230402 2784385 2784384 2784470 91445933 91445932 91446018 86 AAGAAAATTTAAAAAAGGAAAAAAAAAAAAGAAAATTAATCAAACAAACAAACTTGTAAGAACAATCAGAGCACTGGAAATTAAAC ..:....xxx......::............:.....:..x........x...:---:..x..:x..:.xxx..xx::...:..... 53M3I30M 59/83 71.1% 86/94230402 0.0% 3/83 3.6% 33420605 NA +3381 chr4 + 190214555 36204990 36204989 36205068 79 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAGCAAACAAAAAAATCAACAATTATTATTTCAAGAAAAACT chr4 - 94230402 55846646 55846645 55846724 38383679 38383678 38383757 79 AAGAAAGAGGAAAAAAAAAAAAAAAAACCCAAAAATCCACCAAACCAAACAGCCAGGAAATACCATCATAACAAACACT ..:...:.::.................xxx.......x.x.....x...x.::..:x..x..::..:x:..x...x... 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% -19641656 -74588746 +3050 chr4 + 190214555 36204993 36204992 36205074 82 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAGCAAACAAAAAAATCAACAATTATTATTTCAAGAAAAACTAAACAT chr4 - 94230402 25002883 25002882 25002964 69227439 69227438 69227520 82 AATAGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCATTCATTCATTGAAGAAAAACTATACAT ..x.:......x...x...x....x....x..xx..:.xx...x.x...x:.x..x.:...xx..x...........x.... 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 11202110 NA +6248 chr4 + 190214555 36210369 36210368 36210471 103 AATAAATGCATACGTACATACCCTTGAGGAGAGAGTTTATCCAGCCATCCTGATTTAACCTTCTTTGCAGATGCTCCATAAAAGCAGGCATAGGGAGATATTG chr4 - 94230402 21887142 21887141 21887243 72343160 72343159 72343261 102 AATCATTGCAAATAT-CATACCCTTGAGGTGATAATTTATCCAGCCATCCTGCTTTAACCTTCTTTACTGATGATCCATAAAAGCAAGCATATGGTGCTATTG ...x.x....x.::.-.............x..x.:.................x.............:.x....x............:.....x..x.x..... 15M1D87M 86/102 84.3% 102/94230402 0.0% 1/102 1.0% 14323227 NA +11128 chr4 + 190214555 36228595 36228594 36229506 912 CTTTTGTTGACCCTGGAATCTCTGGTACAGGTCGATGTCTTAGCAGAAAAGATCGAGATGGTCTTGAAACCAACTTGCTACGACTTCTCACAGGTGCTAGGATTGGTGATGATGGAACATACAAGTCATTTACAATCATTTCTCCTTGAAACTTAAAGAATGGGGATGGTGGT-------------GATCCTTCTAA----TAAACCATT--TGTTCCATTTCC--AGAATTTGTTCCTGATGTTGAACAGCCAACAAAAGAAAGGCATTCAGAGTCTGCATTAGGGAGCTTACTGAGATTTTCTGTGATCAATTTAACTTTTTCTGTTTGTTGTTCTTCAACTGTGTGATCCACAGTCTTCTTTGTAATCAATGATTCTATTTTAATATTGTCACTACCAAATAAAGAATCATTCAAAGAAC-----CCAAATTCAGGTGTGGTTCCTCTGCAGTGGGGAAGTC-GCGTTTAGGAGGAGACAGCTT--ATCATCTGATT---GAGGATACTGGCTTCTTTCCACACTTGCATCACTGTCTTCAAG----ATTTTTTCTAACAGTCTCCAACTGCGGTGGGCTAGATGTCTGAACA---CTACCAGAATTGGAAAGTTCTATGCAGATATTCTGATCAGAAGATGGAACATGGTAATCCTTTGAAGGGTCATCATTCTTCTTAGTTTTATGAACATTTGCATATATTGGAATAT---CTTGCATTTTTGACAAGATTATCTGTAACTGTTTAAGTATCCTCCTACGGTGACCTGTAGGTGATATTCCAATTTTCTGCAGCAGGCTGTCATTTATTGCTGCACAGTCCTTCACAGTAGTAAAACCAGACTCATGGAAATGTAAGAGATACTGCTCCAAATTAATGCTCATTAGGAAATCTTTTATATCCACATTTACTTCACTGACT---GAGGACATAATGGTGGCTTCATTACTAA chr4 - 94230402 21905876 21905875 21906739 72323664 72323663 72324527 864 CTTTGCTTGATTCAGGGATTTCTGGTACTGGTCGATGCCTTAATATAAAAGACCGGCTTGTTCTTGGAA----------ATACTTTCACACAGTT--------CTGTGTACAAGAATCATATAAGTCATTGTCTATCATTTCTCCTTTAAACTTAACAAACGGTGAATGTGGCTCACTATCACATAGATCCTCCTCAACTGCAAACATCTGATGTTTGTTTTCCTTGTATTTTGTTTCATACG------AATGAGTAAGTGAAAGAGGATCACAAAATGC--TACACAGTCAGCCAAG--------TGCTCA-----------TCAGTTTGGTATGCAGCAGCTTTTTCCAGCAATGTATT------------TGACTCAGTATTCATCTTCATACTTCCACTTACAG-----TTTTTAGTACGCTGTCTGAACCTCGGTATAA---------ACTAGGAAAATCTGAGTTTGTAA------AGCTTTCATCATTTGCTTCCAATAGGTATTG----CTCTCCAAGTCTGGACCTTTCTTTACCAATGTAAGCTTTGTTAGGAAGTTGTACCAATGATGTTGCAGGTATCAAGCCAGATTCATCTACGTTTAAATGGCTTACTGGGGAATCCTCATCTGAAAATG-AATATTGTT-TCTTTTCTAAACCTTTCAACACTTTGAGTTTTA----AATTGTCATGGGGAAGAGAATTTCCTTGCATTTTTGAAAGAGCAGTGTCTAATTGCTTGAGTATCCTTCTGCGATGGCCTGTAGGCAATACTCCCATTTGCTGAAGTGCGCTGTTATTTATTCCCACACAGTCTGTCACAACGTTATAGCCATGTTCTTTAAAGTTAGGAAGATACTGCCCCAAGTTAATGTTGACCAAGAATTCTTCAATATCAATG------TCACTGCCCGTGGATGACATGATGGCAGCTTCATTCCGAA ....xx....::.x..:..:........x........:....::.x......:..:xx..x.....:..----------.::x:...x.....x.--------:x...xxx.x.:.x....:........xx.x.............x........x:..:..x..xx....:-------------......:..x.----:....xx:.--....:xx.....--:x.x......:.xx.:.------.::x.::..:x.....:x:x...x.:xx...--..x:x..::x:.::..--------..x...-----------..x.....x.:.x.xx..:..x.x.xxxx..xx..x..------------...:..x:.x..x..x..xx:...x...xx..x..-----..:xx..x..-----.::..:::x...:.::---------.x.:..:..:..-.x....:x:.------.....--.....:..x..---:x:.:..:..----..:....x:::..x.:.x:.x.:.x.x.:----.x:...x:..:x.:x:.x:.x.x::.:..xxx:..:.:..x::x..---::.:.x:x:..x:..x.x::..:xx:.:x..:..x...x...:...-..:..x..x-..:...xx.::x::x...x:x:.:.x.......----x...xx...:x:xx:..:x..---.............x.::::x:.x.x...:..:..:........:..:..:..:........::...:...x....x...x..::x.....:.......x.::.......:x.....:::x..x.:...x::..x.x:..:.xx:::.........:....:......:.x.::.:...x....:x.....x.::------......x.:---..x.....:....::........x.x.. 69M10D16M8D70M13I11M4I9M2I12M2I17M6D31M2D16M8D6M11D38M12D35M5D10M5I16M9D12M1I10M6D5M2I11M3I10M4D29M4I46M3I46M1D9M1D33M4D21M3I194M6D9M3I28M 515/819 62.9% 864/94230402 0.0% 138/819 16.8% 14322719 NA +3007 chr4 + 190214555 36238926 36238925 36238985 60 TGGTTATGGTAAAAAACAAAAACAAAAACAAAAACAAATGTGCTTGACGAGAAAATAAAG chr4 - 94230402 34506668 34506667 34506727 59723676 59723675 59723735 60 TGGTCATGGAAATAAATAAAAACAACAACAAAAACAATCTTCCTTAATGACCAAGTGAAG ....:....x..x...:........x...........x:x.x...:.:..xx..:.:... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 1732258 NA +3168 chr4 + 190214555 36247358 36247357 36247435 78 AAAAAAAAAAAAAAAAAGGTAAGAAAATATGTTTAATCTCAAGACCATTGGAACATATATTCCCAGTAATTTTCATCT chr4 - 94230402 16899047 16899046 16899123 77331280 77331279 77331356 77 AACAAAAAAAAAAAAAAGGAAAGACAATATAATTAAATGTAAGATCTAAGGAATAAATATTCTCC-TCATTCTCATTT ..x................x....x.....:x....x:x:....:.xxx....:.x......:.x-.x...:....:. 65M1D12M 57/77 74.0% 77/94230402 0.0% 1/77 1.3% 19348311 NA +3373 chr4 + 190214555 36247358 36247357 36247435 78 AAAAAAAAAAAAAAAAAGGTAAGAAAATATGTTTAATCTCAAGACCATTGGAACATATATTCCCAGTAATTTTCATCT chr4 - 94230402 16896789 16896788 16896865 77333538 77333537 77333614 77 AAAAAAAAAAAAAAAAAGGAAAGACAATATAATTAAATGTAAGATCTAAGGAATAAATATTCTCC-TCATTCTCATTT ...................x....x.....:x....x:x:....:.xxx....:.x......:.x-.x...:....:. 65M1D12M 58/77 75.3% 77/94230402 0.0% 1/77 1.3% 19350569 NA +3141 chr4 + 190214555 36257402 36257401 36257472 71 CTCCCAAGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCACGCCACCATGT chr4 - 94230402 18197139 18197138 18197207 76033196 76033195 76033264 69 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTGT ..:.:::.........x...x:xx.x........::.:x........:......x.:...--....::... 60M2D9M 50/69 72.5% 69/94230402 0.0% 2/69 2.9% 18060263 NA +13243 chr4 + 190214555 36290320 36290319 36290722 403 TAAAGTACATAAATCAAATAATTGGAAAAATGACATTCTTTTTCCCCCTCCAGGTATCTTGATGTGCTGAGTGATGTTACTGGCCCCCAAGTGTCTTGTTATATTACAGCACCATCATATGTTCTACAACAACTAGAATGCCGGATAATAAATCACATGAGTTCTTTAATAGTGGGTGATAATGAAGAGTTAGTTAGCAACGTCATAACTATTGAATGCTCAGATAAGGAAAAGAGAGTTCCATTTCCAATAGGCATTGCAATTCCATTTACTGCACGTTACAGAGGAAATTACAGAGATATCATGGTGAAAGTGTGTGACATAAACCTTCAATCAAGTTACCTAAACCCAAATTCACTAGAAGGAATGAAGGGAGGTTATAAGGTTAGTAAATTCTTGGCTA chr4 - 94230402 21925893 21925892 21926295 72304108 72304107 72304510 403 TGAAACCCAAAATACaaaaaataataaatatacatttattttttttCCTCCAGATTTGTAGTGGAAGAGAGTGGTAAGAGTGAACATAAAATACTTTGCTTCATTAAAGCCCCCGCAACTGCTCTGGAGAATCTGGCATGTACAATAGTCAATGACACAAGTTCCTTGGTGGTGGATGATTTTGAGGAGCTGGTCAGCAATGTCATCAGTGTTGATTGCTCTGATTATGAGAAAACTATCCCTTTCCCTATTAACATTGCAATCCCATTTACTTCACACTTTAGAGGAAATTATCGGGAGATTATGGTGAAGGTGACAGACGTGAACTTTCAATCACATTACTTAACTCCCATTTCTCTGGAAGGATACCACGGAAACCACAAGGTTGGTAACCTGTTTTCTA .:..::x..x..xx....x...x:x...x..:xxx..x.....:::.......:.x.x.x.xx.x:xx.....:.:xx.x..:x.x:x..:.:::...:.x:....x...x..xx..xx..:...:x.:x.x..:.x...:xx:...:.x...x...::.....:..::.:....:....xx...:...:.:..:.....:.....x.x.:....x.....x...x.x..:..:.xx:.:..x..:..x..x::.........:.........x...::.x:...........:x.:..x..:........:...xxx...:.:...:........x:....:...x:..x.x...x..:......xxxx.x...::::.:......:....x:.x..xx... 403M 259/403 64.3% 403/94230402 0.0% 0/403 0.0% 14364427 NA +5383 chr4 + 190214555 36306204 36306203 36306448 245 TCCATAAGAAAACCTAGGAAAAATGCCAGTGAATGTTTGAAATTACTGGGATTCAGAAGCCAAGAC-AGTGGTTGGTGTGGGCTTGATGATGTTGTGA---AAACCATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAACATTTGGAGAGGTAA--TACCATCAAAAACAATCAAAGTTGAT-------GATACTCTTTCTGATGGTCATAACTGGTGTTTATAGAAATGGAATAGTAAGATTAAATTTTTATTC chr4 - 94230402 21928966 21928965 21929210 72301193 72301192 72301437 245 TCTTTGAGAAAGAATGGAGAGAATCTCAGTGATACTTTCAAATTATTAGGTCACAGAAACAAAGATGAGTGGATGGTCT----TTGATGACATTATTATCCAGAATGCACAGAATGGACTTGTGTCATTTGAACTGAATGAACATTTAGAAAGGTAATGTATGaaaaaaaaaatacaaattttatttactaaaatattttCTTTCAAGTACATAA-----ATCAATGGAAGT----CAGTAGGGTTAAGAAGTCATTC ..:x.:.....:xx.:.::.:...x:......xxx...x......:.:..x:x.....:.x....:-.....x....x.----.......::..:.x.---.:.x:::.....::..x:.x..:...x.....:..x..........:..:......--..:x.xx.....x.xx....x..x..-------:...:.:.:.:.x.x.xx.....-----:.:x..:...:.----:....:.:....:xxx.:.... 66M1I12M4D15M3I56M2I26M7I23M5D12M4D22M 155/232 66.8% 245/94230402 0.0% 26/232 11.2% 14377238 NA +7235 chr4 + 190214555 36308198 36308197 36308528 331 ATGCAGGTTTATTGTACTTCACCTCTCTTCCACCATGGACAATAGTCATTTGGTTACTTTTGTGAAATCTTTAGAGGAAGCCATGCTCAGCACCACTGCCTGCATAGTACTGTCTCACCAGAAGGACAATCCACATAGAATAGCTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGGAGGACCTCCAGAGCCATCTCGTCATTTCCAAGTTCGAGAAGGAGAACAACTTCTTTTAAGATTTACTGGAAACATATTTGCTTCAAGTAAGTATAAAGAAATCTTTTTATATATTTTATTG chr4 - 94230402 21929679 21929678 21930003 72300400 72300399 72300724 325 ATACAGCTTTGTGGTCGTTCGCCTTTCATTCCTCTTGGAAAACACTTATCTCCTCCTCTTTGCTCAGGCTCTGGAAGAAGCTGTTTGTAGCACAATGTCAAATGTGATACTGTATCAGAAAAGAGAAAACCCATATAAAATAATAGTTTTACTATCTGCATCCAAGGAATTGACATGGGAAATACAAAATCTCCATGAAGAGGGCTACTTTGGTCCCCCAGAACCTACACAACAGTTTCCTTTAAGAGAAGGAGAGCAAATTCATTTTCAATTTAGAGGCAATATATTTGCTTCAGGTATG------GTAATTAATTCATGTTTTTCAATG ..:...x...:.x..xx...:...:..x.:.x:.x....x..:.x.:..:.xx.:x::....:xx.:x..:.:..:.....::.x:x:.....x.:xx.xx:::.::......x...xx.:.::..x..:...:...:....::x......x.:x:xx.x.....:..x..:.xx::..x:x.xx.::.:..x..:xx:..:..x.x:xxx..x..:.....:..xx.x.:x..x..:.xxx.xx..........:...x...x...xx:.....xx..x..:............:...x.------.x...:xx..:..:.x...:.x.. 301M6D24M 193/325 59.4% 325/94230402 0.0% 6/325 1.8% 14378519 NA +10958 chr4 + 190214555 36316240 36316239 36316493 254 AGGCAACGGGAAGGATTATGGAAAAGACTACACACTTATTTTTCACTTGCAAAGAAAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGACGAATTTGGAAACTATAGTTGCCCTCATTACAAAGGCACCATTGTCGTTTATAAAGTACCTAAAGGAAAGATAGTCCCCAACTTGAATCAATCTCTC-------GTAATTAATGAAAACCATTCTCAGTTGCCAATTTGCAAATTACCATTGAAATTGCCAAAGGTGAGTT chr4 - 94230402 21931287 21931286 21931540 72298863 72298862 72299116 254 AGAAAATGGAGAAGATTTTGGAAAAGCCTACAGGCTGATTTTTCATTCACAAAGAAAGCCCAGACTAGAGCTCCATATTAAAGAAGTGGATGAGTTTGGTAACCACAGCTCCCCTCACTACAAAGGAACAGCAGTGTTTTACAAAATTACCAGAGGGATGATAACCAAGGAATGGAAACAGCCCTTGCCACATGGTAATTA-TCAAAACCAGACTC------CACTGTGCAAATTACCATTGACATTACCAAAGGTGAGTT ..:x..:..::.:....x........x.....x:..x........:.::........:..:..:..:..:.....x..:...........:..:.....x...:.:..:.x......:........x..x::x..xx....:...:.xx.:.:...:.x....::.xxx:.x.x...x..::.::.x-------.......-.x.......xx...------..x.x................x...:............. 187M7I7M1D14M6D39M 182/247 73.7% 254/94230402 0.0% 14/247 5.7% 14384953 NA +3078 chr4 + 190214555 36324128 36324127 36324184 57 CCCTTCTCCTCCCCCCCATT----CCTTTCTCTTGTTCCCTTTCCCTTTTCTTTTTCCTTT chr4 - 94230402 20485626 20485625 20485686 73744717 73744716 73744777 61 CCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT ....x.:..x.......x:.----..:..:...:x.....:..:..:.............. 20M4I37M 45/57 78.9% 61/94230402 0.0% 4/57 7.0% 15838502 NA +3579 chr4 + 190214555 36326838 36326837 36326977 140 GAGGGTGACATTTTGTGTGTGGCTGTCC------AGGCCTTTCCCAGAAACATTCAGATTACTCTTTCTATTGGAAAAACTATTTCTAGCTATGATCCAAAAAGCCAAACCAAAACAAGGATTTGTTTTTCTTTTTTTTTTTTTTT chr4 - 94230402 43957552 43957551 43957697 50272706 50272705 50272851 146 GAGGGTGGTATTTGCTGCCTTGCTTTCTTTCCTAATGCTCCCTCCAAACACACTTAGCTTAAATACAATATTTCAGCATTTGTTTCAAGCCACATAATAAAAGCTCAAACTGAAACTAGTCTTTATCCTTTTTTTTTTTTTTTTTT .......::....xx..:x.x...x..:------.x..:::::...:.x...:.:..x...xx:x:xx....xx.:x.x:.:....x...:.::xxx:....:x:.....::....x..xx...:.::..:............... 28M6I112M 86/140 61.4% 146/94230402 0.0% 6/140 4.3% -7630714 -86599688 +3995 chr4 + 190214555 36339068 36339067 36339176 109 TTAATTACTTCTTCTGTTTATTTTGTGTTCCTTTCCCCCAATAGCATAAGAAATTAATCAACCGTCCACAGAGTACCAAAAGAGTTTCTAAGGATCCTGTAGGTGAGGA chr4 - 94230402 21937609 21937608 21937710 72292693 72292692 72292794 102 TTAGTCATTTCTTTCTTCAACATT-------TCTTCTTTGATAGCATGAAAAGTTGATCAACCGTCCACAAAGCACAAAAAGAATTTTTTGTGATTCATCAGGTAAGAA ...:.:.:.....::x.:x.:x..-------.:.:.::::.......:.:..:..:..............:..:..x......:...:.x:x...:.xx:....:..:. 24M7D78M 68/102 66.7% 102/94230402 0.0% 7/102 6.9% 14401459 NA +12603 chr4 + 190214555 36343492 36343491 36343844 353 TGCCTGACAGAAGCCCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAGTCTCT---TTCCTCAACTCTCCCTCTGCGCCGTAGCACCATTCAGCTCATCAAACTCAAGAACCCTGATGATCTCACAGAACAGATCCACGAGTTTCTTTGCTTCTGGAAAAAATCGCTTCCAACTTTCACCGACAAACTTCGCCTCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTCAAGTGGGAAAATAAAGTGTTCACTGAACCACAGCAGTGTTTTGATGTAGCCCCTGAGTAAAAGCCTGATCTCTCTTCCTT chr4 - 94230402 21938246 21938245 21938582 72291821 72291820 72292157 337 TGCCCTTCAGAGGCCCTATGGGACAACTTGCTGCACTGGCTTGCGGAAGAGCTTGCAGAAGATAATAC---ATCACTGAATGCTTTACGCTTGCCTGTTCGGCGGAGCGTGCTTCAGCTTGTTAGACTGAAGTGCCCTGATAATTTAATACACCAGAACTATGAGCTTCTTTGCTGCTGGCAAAAGACCCTTCCAAGGTCGGCTGACAAACAGCAGCTCCTGTCTCGCTATTTGCAGAAGAGTGGCAGAAGGGATCTTTCAGAAGAACTTCATTTTAAGTGGCAAAACAAAGTGTTCACTTGACAGAATCACTG-------GCAACT---------AAGCCCAATTTTTCCTCTTT ....:xx....:.....x.....:........x..:.....x..x..:.....:x.......x...:.---:..x..---.x.:.:.xx::.x...x.x..x..x...::xx.......::.:.:...x...x:.......:..:.x.:.x.x....x.:.:...:.........x....x....:x.x.......xx.:x:.:.......xx.:x......x....x:..:.x.:x....x......:..x......x.......:..:x.x..:......x....:............x:..x:x.x..x..-------.:.:.:---------.....::..:.:..:..:.. 68M3D6M3I234M7D6M9D20M 235/334 70.4% 337/94230402 0.0% 22/334 6.6% 14405246 NA +3019 chr4 + 190214555 36355107 36355106 36355152 46 CTCTCTCTCTCTCTCTCTTTTTTTTTTCTTTTTTGAGACAGGGTCT chr4 - 94230402 63778263 63778262 63778308 30452095 30452094 30452140 46 CTCTCTCTCTCTCTCTCTTTTTTTTTTTTTCCTGGAAGTAGGCTTT ...........................:..::.x..:::...x.:. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -27423156 -66807246 +3003 chr4 + 190214555 36416795 36416794 36416859 65 TTCTTTTTATTTTACTTTGTTCTTTTCATGGATGTAACACCTCTTATTTCTCTCAGGATAGGAAT chr4 - 94230402 82014839 82014838 82014903 12215500 12215499 12215564 65 TTCTCTTTTTTCTCCTTTTTTCTTTACTTAGATGGAGTGTTTCTGACTTCTGTCAGGATAGAAGT ....:...x..:.x....x......x.x.:....x.:::::...x.:....x.........:.:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -45598044 -48632358 +3162 chr4 + 190214555 36472581 36472580 36472620 40 TCCTAAGAAAAAAACAAAACAAACAAACAAACAAACAAAA chr4 - 94230402 81661605 81661604 81661644 12568759 12568758 12568798 40 TCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAA ....x.:............................x.... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -45189024 -49041378 +3132 chr4 + 190214555 36472586 36472585 36472633 48 AGAAAAAAACAAAACAAACAAACAAACAAACAAAAAAACTCCATATAC chr4 - 94230402 40527173 40527172 40527220 53703183 53703182 53703230 48 AGACAAAAACAAAACAAACAAACAAACAAAAAGAACAATCTCAGATAC ...x..........................x.:..x..:::..x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -4054587 -90175815 +3201 chr4 + 190214555 36524576 36524575 36524620 45 GTGTGTGTGTGTGTGTGTGTGCATGTGTATACATGTACATATAAA chr4 - 94230402 50558510 50558509 50558554 43671849 43671848 43671893 45 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGA ...::.....x..........................:.x.:.:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -14033934 -80196468 +11865 chr4 + 190214555 36630746 36630745 36631124 379 CAAACTGCTGGCCTGACTTTCTGATTACCTAAAGCTGTTTCTCATACATCTGTCATAACTTATAACAAGACATTTAAAAGGATGTCTGACAACCAATGTGAAAAGCTATTTAGTCCTCAGTC----------TAGCTTTTCAAATGGTAGTACATTGATCAGTTAGGCAGTTTAATGAATCTGCCATCTTGTATCAGCAGTTATTCTCTAAATTAAGTCATATTCCATATAAAAACCTTATTGTTATTCAAGGCACTTCCCAGCTCCAGCTGTAAGACTGGATTAAATCAATATGTTCCTATGAGAAACAGCTTCTTG-GGGAAGGCAATGTTAAAGTG----------CACAAGGTAACAACAAAAGAAAAATACAGGATTTCATTTTACTAATGAAGT chr4 - 94230402 21990997 21990996 21991376 72239027 72239026 72239406 380 CAGAATACTGGCTTCATTTTTTAGTT-CCTAAAATATGTTCTTTGACA-CTGTTGCAATGCAAAACAGAGAATGTAACAGATTATTAGATAATCAA-GTGA-------------CCTAACTTCAAAAAATAGTATTTTCTAAAGTATAAGGACATTGACCAATTGTGTAGTTTAATGAATGTGCCACCTTGAATCAGCAAC-ATTTTCTAAATTAAGTCATATTCAGTATAAAAGACTCATTGTTATTCAGAATGCTTTTCAGCTACAGCTGTAAGATTTCATTAAATAAATATGTGCCCACTAGGAACAGCTTGTTGAAGGGAAGTAGTGTGAAAATACTGCAATATTCACAGTG---CAAGAAGAAAAAAATGCCTGGCTAAATTCTACTGATATAGT ..:.x.:.....:.x.:...:.::..-......::xxx....:xx...-....:::..:x:.x....:::x..x...x..:x.:.:x..:..:...-....-------------...x.x.:----------..x:..:.x..:.:xx..x.......:..:..:x.:............x.....:....x.......::-...:...................x:.......:x..:...........:::::...::.....x...........:.xx.......x.......x..:.:x..:........x...-:..:.:.:.:...x...:.:----------....:x.---...x..:.:......:.xx.::.xx...:....:..:x... 26M1D21M1D47M1D4M13D8M10I69M1D116M1I20M10I7M3D41M 252/359 70.2% 380/94230402 0.0% 41/359 11.4% 14639749 NA +3331 chr4 + 190214555 36671218 36671217 36671283 66 CTGCTTCAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA--AATAAGACAAAAGAGTCAGCAGAGAAC chr4 - 94230402 76845952 76845951 76846012 17384391 17384390 17384451 61 CTTCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAAT-------AAATGTCAGTGGAGGAC ..x..x.................................--...-------..:x.....::...:.. 39M2I3M7D17M 52/59 88.1% 61/94230402 0.0% 9/59 15.3% -40174734 -54055668 +3007 chr4 + 190214555 36671221 36671220 36671258 38 CTTCAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAA chr4 - 94230402 87676342 87676341 87676379 6554024 6554023 6554061 38 CTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ..x.x...............................:. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -51005121 -43225281 +3038 chr4 + 190214555 36671231 36671230 36671299 69 AAAAAAAAAAGAGAGAGAGAGAGAGAAATAAGACAAAAGAGTCAGCAGAGAACCCAAATATTATAGTGT chr4 - 94230402 55704994 55704993 55705062 38525341 38525340 38525409 69 AAAAAAAAAAGAGAGAGGGAGAGAAAAAGAAGAGGGAGGGCTTTACAAAGCTACTGAAAATAATGGTGT .................:......:...x....x::.:.:x.:x:..:..xxx.::..x..x..:.... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -19033763 -75196639 +3018 chr4 + 190214555 36684359 36684358 36684414 56 AAGGAGTATTTTATGTTTTTGTAGTTTATAATTTCATCTCTTTTTCAGCTTATTAG chr4 - 94230402 2667370 2667369 2667425 91562978 91562977 91563033 56 AAAGGACATTTTATATTTTTATGTTTTTCAATTCCATATCTTTGACAGCTTATTAG ..:.:::.......:.....:.:x...x:....:...x.....xx........... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 34016989 NA +3194 chr4 + 190214555 36684359 36684358 36684430 72 AAGGAGTATTTTATGTTTTTGTAGTTTATAATTTCATCTCTTTTTCAGCTTATTAG-CTATAACTCTTTGTTA chr4 - 94230402 2678817 2678816 2678889 91551514 91551513 91551586 73 AAAGGACATTTTATATTTTTATGTTTTTCAATTTCATATCTTTGACAGCTTATTAGAAGACAACTTTTAGTCA ..:.:::.......:.....:.:x...x:........x.....xx...........-xx.:....:..x..:. 56M1I16M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% 34005542 NA +5723 chr4 + 190214555 36697901 36697900 36698161 261 TTTGCTTTTCTCCAGTTTATATTCTTATATTTTTCTTGGTTTCTTATCCTGTGAAATTGTAATAAACATAATCCCTGCCTCCATAGTGAGAACATTATTTGTTAACAGATGGTAGGCTTTCAAAATC------------TGAATCACTTGAAAGTAGAAGAGACTGAAAAAGGTAATCAAAGGTGAACTCTGCTTAATACTGGAAAAGGAAGGTCATTTTTACCCTCAAGAAGTACA-TAAACTCTTATACAATAAGGAAAGTTACCAACTGCT chr4 - 94230402 22013120 22013119 22013388 72217015 72217014 72217283 269 tttttttttttttttttttttttttttttttttttttGCTTTTGCCTCCTCTTCAGCTACAAAGAGACTCATAGCTAAAACATGAGGTAAAACATCACTGGT-GACAGATGGTTGATT---AAAATCATGGACACAGATTAAGCAAGAAAAAAGTTGGAGGG-CTGAAAGAGGTAATTAAAATGGCAGCTTGCTCAAGAAAGCAGAAGAGAGGTCATTTTTGCCCTTAAGAAATGTATTAAGCTATGCTACACTAATCAAGATTACCAACTGCT ...x:....:.::xx...x.x..:..x.x.....:...x...:x:x....x.xx.::.::..x:.:xx.x..xx..:xxx.xxx..xx.:.....:.:.x..-:.........x.::.---......------------.:.::x.xxx:.....x.:..:.-......:.......:...:xx.x.x::....:..x.xx.x.:...::...........:....:.....:.::.-...:..x.xx....x...xx..::............ 102M1D15M3D6M12I23M1D74M1I36M 164/256 64.1% 269/94230402 0.0% 18/256 7.0% 14684781 NA +3322 chr4 + 190214555 36698982 36698981 36699066 85 TCTGCTATTGTCTTTCTGTTTCAGGATCTAATCTAGAATCTTTTTTTTTTTTTTTTTTTTTTGACAGAGCATCGCTCTTGTTGTC chr4 - 94230402 15749674 15749673 15749754 78480649 78480648 78480729 81 TCCTCCACTATATTCCTGTTTGATAATCTGATCAATAATCTGATTTTTTTTTTTTTTTTTTTGTT----CAGTGGCCTTGTTATC ..:x.:.:.:.x..:......x.x:....:...x.x.....xx....................x:----..x:.x:......:.. 65M4D16M 59/81 72.8% 81/94230402 0.0% 4/81 4.9% 20949308 NA +3289 chr4 + 190214555 36720586 36720585 36720668 83 TATATATATCTCTCTCCATATATATATCTCCATATATATATATCTTCATATATATATATATCTCCATATATATATATATATAT chr4 - 94230402 15725428 15725427 15725510 78504893 78504892 78504975 83 TACCTACCTTTCTCTCCACATAATTCTGTGTACACATGTATATCTGCATATATGAAAGTATCACTGTATTTTTATATATGTAT ..:x..:x.:........:...xx.x.x.x:.:.:..:.......x.......:x.x:....x.::...x.x.......:... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 20995158 NA +6034 chr4 + 190214555 36723918 36723917 36724186 269 AAATATTTTTCCTTAACAATTTAATGCTGGTTGTTTTATCACCCATAGCAAAAA-TCTATCTGTTTTATAGCTACATTTAGATGCTTAG----TTACACACATT----TTTTCCTCTCCTGTAGTTTGGTAATTTCTCAGTAGAGGGATATTACCTGACTTATGACATTAGTTTATTTTTCCATGTCGGAAAAACCATTTGCTACTCCACCTTTTATTGTAAATGGTAATTACCT-AGTCAATCCACTTTAGGTTTCATAT---AGATCAGTTTTATAAGCC chr4 - 94230402 22020715 22020714 22020983 72209420 72209419 72209688 269 AAATGTATTTACCTGATGAGCCTCTGCTTGTTATTTTATTACTGGGAGTAGGAAGTGTTCCTGTTTTATAGCTCTATTGA-AGGTTGAGAAATTTAAACAAATTGTATTTTTTCCCTTCCAAGACCATATAATTTATCAA------------GCCTTGCTCAGTTTATTACATTATTTTTCCATGCACAAAAATTCATTTGCTGCTCTGCTTCTTATTGAAAATGGTAATTTCCTGGGTGGATGCACATCTGTTGACATATTAAAGTCCAGTGTGATGAGCC ....:.x...x.:.:.::.x::xx....x...:......:..:x:x..:.::..-.x.x:.............x:...x.-.x.:.x..----...x...x...----....:.:..:.::x::::xx:......x...:------------:...x:..:.xxx:....xx.............:xx:....x:........:...::.:.:......x...........x...-:..x:..x...x.:x.x.xx.....---..x:....x.x..:.... 54M1I25M1D8M4I11M4I32M12D83M1I25M3I18M 170/256 66.4% 269/94230402 0.0% 26/256 10.2% 14703203 NA +3667 chr4 + 190214555 36726379 36726378 36726450 72 CTGCAACCTCAGCCTCCCGGGTTCAGGCAATTCTTCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:x.:x..:.:.......:.::x...x:xx.x........:............:......x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 18529253 NA +3289 chr4 + 190214555 36733737 36733736 36733810 74 CTGCAGCCTCAGTCTCCTGGGCTCAAGCAATCCTCCTGTGTTAGCCTCCTGAGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x.:x..:.....:.....::x.:.x.xx.xx.:.....::::.........:...:..x...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 18536611 NA +3100 chr4 + 190214555 36736754 36736753 36736901 148 TGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATAAAATCACACATAGGCTTTCTTTTCCACAAGAAACTCATTCATAAAAAGCAGTTAAAT-TGAGTTACTAATCATTG chr4 - 94230402 59607258 59607257 59607387 34623016 34623015 34623145 130 TGCCTAATATTAAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACAT--ATATCAATATATATAGAAAATC-------TGTTTTTTTTTTTTAAAGGAAT----------AAAGTAGTAACTTACGAAGTACTAGCCACTG ..:..x.x.xx....::.....xxxx:.x.:.......:....:.:......:..--....xx.........x......-------x.:...:....::xx...:..:----------....:...x.xx.-:..:x.....::..:.. 55M2D22M7D22M10D13M1I17M 89/129 69.0% 130/94230402 0.0% 20/129 15.5% -22870504 -71359898 +3038 chr4 + 190214555 36736778 36736777 36736886 109 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATAAAATCACACATAGGCTTTCTTTTCCA---------CAAGAAACTC-ATTCATAAAAAGCAGTTAAATTG chr4 - 94230402 69437739 69437738 69437848 24792555 24792554 24792664 110 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGTAATTCTG--------TTCTTTCTCACACTGTTTTCAAAAAGTTCTGCTCATGAAGCAAAATTAAAATG .........x........:x...................x.-..:...x:x...:x::--------......::..---------...:..::..-::....:..:x:x.:.....x.. 41M1D16M8D10M9I10M1I23M 74/100 74.0% 110/94230402 0.0% 19/100 19.0% -32700961 -61529441 +9451 chr4 + 190214555 36740744 36740743 36741182 439 TGCCATGAACTAAAACTTGTTATCCTATTCCAAGCCAAGAAATTAAATATTTATAGTTTCGTTTTTCATCTAATGATCTTGTTTCCTTTTATATTTAATTCCAGCAGTTGGCTTGAGAAAGCCTAAAGGTT--CTATTCAAAATTTTATGAATCCCTAGGCCCACCAGATTGTTAATTGGATGGTGTATTACTATAAAGGAAGTGAGAAATGCCTAGCATAATTGTATAACGTTTGTTTTCTCTGCGCTGTGGGAATTCTCGGGGGTTTCATTAGCAGATGGTTACTGAAAGCCAGAATCCTGGAGTCTGGACTGGTGAATAGCATTCTTCTTAATTATTCAGTAACTAGCCTGCACAGGTCAGGTCTAAAGCACAGATACTAAATTCAGAGCAC------TCTGGACAATAAATTTCCTTATCTTGAATTACGATTTTATTCTCTT chr4 - 94230402 22026910 22026909 22027324 72203079 72203078 72203493 415 TGTCACAAAATGAGTCCAGTAATCCACCTCCAA-----------AAGTATCT-----CTCTTCTTTATGTTACAGattttttatttttttattttt---tCCAAGAGCT---CTAAAAACAGTTAGGAGTTTTCCAGTCAAAATTTTATGGAACTCCAGAACAGCAAGTTTGCCTACTATACTGCATACTTCTGTGAAAGAAA-GAGAA-----TA----AATTGGATTACATTTTGTTTCTCCGCTCTTCTGGAATTCTCTTGGGGTTCATTAGTAGGTAGCTACAGAATGCAGGCATCCCAGATAAGGTACTGGAGAATATCATTTACCTTAATTATTCCTTAACTAGCCTACACAGGTTGGTCTTGAGGCAAAAGCATTAGATATCCAAAACCTGATATTTAAGCAGTTATTTTACTTGCTTTAAATTGTACTTATGTCCTGTT ..:..::..x.:.:x.:x..x....xx:.....-----------..:...:.-----:..x.:...xxx:..xx...:..x.x.::......x...---....:x..:.---:.:.:..x:x:..:::...--.:.x.............:.x.:.:..:x.x:.x..x...::x.:.:x.:x.::..:.x..:.:..:...:-.....-----..----.....x..x..:...xx......:..x..x:x.........xx...x........:..:.:.:...x...x..x:.x....::..xxxx.x.....x.....x....:x:...........xx..........:.......::.x::.:.:...x.:::.:..:..x:xx.:x..------.:.:::..:.x.x...x...:::..:....:::x..x.:.:..x.. 33M11D8M5D39M3D10M3D19M2I70M1D5M5D2M4D175M6I46M 260/407 63.9% 415/94230402 0.0% 40/407 9.8% 14713834 NA +3102 chr4 + 190214555 36784313 36784312 36784431 119 TGAACAAGTTTTGTTTT-------TTGCCCAAATTAACCTAGAGTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 15963310 15963309 15963435 78266968 78266967 78267093 126 TGGCCATATTTTGTTTTCATAATGTTTATTCAGTTAACTTAGTTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ..:x..x:.........-------..xx::x.:.....:...xxx.:...x.x::.x...xx::..xx.x......:.......:.....:::::...xx..:...:...:xx.....x...::.. 17M7I102M 75/119 63.0% 126/94230402 0.0% 7/119 5.9% 20821003 NA +4447 chr4 + 190214555 36942103 36942102 36942243 141 TATTATATATATAATATAATATATATA---------ATATAATATATATATTATACATATTATATATATAATATAATATATATAATATAATATATATATTATGCATATTATATATATATAATATAATATATATAATATACATATCCTACT chr4 - 94230402 67910059 67910058 67910205 26320198 26320197 26320344 147 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATAC-ATGTGAGATAAAT-TTAAGCTGATTAAATATCAACATTTGAATACATATAAGA-AAATATTTTATT .....:.....:....:x.x.x.....---------.:......x.......:..:...x........xx..:..:......:-..:.:.x...x..-...x..xx....x....xx.:.x.xx....:......x.-.x....::..:. 27M9I47M1D13M1D39M1D12M 102/138 73.9% 147/94230402 0.0% 12/138 8.7% -30967956 -63262446 +3868 chr4 + 190214555 36942151 36942150 36942237 87 TATTATATATATAATATAATATATATAATATAATATATATATTATGCATATTATATATATATAATATAATATATATAATATACATAT chr4 - 94230402 67910059 67910058 67910145 26320258 26320257 26320344 87 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGT .....:.....:....:x.x.x.....x...x.x...:...x..x::.....:......xxxx.........:..xx........:. 87M 64/87 73.6% 87/94230402 0.0% 0/87 0.0% -30967908 -63262494 +3103 chr4 + 190214555 36955767 36955766 36955863 97 CCTTTCAAAGAAATCTAAACTTACAGTGTGTTAGCTAGTGTTTTCTTTCTTTCTTCCTTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTT chr4 - 94230402 49339914 49339913 49340010 44890393 44890392 44890489 97 CCTTTCAAAGATCCAAGGAAGTGGATTGCACTATTTGGTTTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ...........xx:xx::.xx.:x.x..:::..x:.:..x.xx:x.......:.xx:x.x......:....:...:.....:...:...:....:.. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% -12384147 -81846255 +3274 chr4 + 190214555 36955808 36955807 36955896 89 TTTCTTTCTTTCTTCCTTTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCTTTCTTTCTTTTTCTTTTTTTATAACA chr4 - 94230402 8439379 8439378 8439467 85790936 85790935 85791024 89 TTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTTCAGAACA .....::.:x.x...:x..:.:.::..x.:::.:.:.:......:..::...:....:.......:xx...xx.::.:.:..:.x.... 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% 28516429 NA +3031 chr4 + 190214555 36955825 36955824 36955898 74 TTTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCTTTCTTTCTTTTTCTTTTTTTATAACAAT chr4 - 94230402 19711335 19711334 19711408 74518995 74518994 74519068 74 TTTAGTTCTTTTTGTTGTTTACTGTTACTTTATTTTTTATCTTTCTTTCTTCCTTTTTCCTACTCTGCAAAAAT ...xx:.....:.x.:x..:x..x..x....x...:..x..:.........:.......:.x:.:.::..x... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 17244490 NA +3162 chr4 + 190214555 36955826 36955825 36955892 67 TTTTCTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTTCCTTCTTTCTTTCTTTTTCTTTTTTTAT chr4 - 94230402 45600389 45600388 45600455 48629948 48629947 48630014 67 ttTGCTATGTTTGTATATCTGTCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTAT ...x..x.x.:.x.x.x...x..:x...x...:.....:....:.....x.....x....:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -8644563 -85585839 +3154 chr4 + 190214555 36969830 36969829 36969876 47 CATCTCAAAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAA chr4 - 94230402 31015344 31015343 31015390 63215013 63215012 63215059 47 CATCCTAAAAAACAAAACAAAACAAACAACAACAAAAACAACAAAGA ....::....................xx.x........x......:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 5954486 NA +3127 chr4 + 190214555 36983584 36983583 36983643 60 ATGATATTCAGAAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATC chr4 - 94230402 27486705 27486704 27486764 66743639 66743638 66743698 60 ATAAAAACCTGAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATC ..:.x.x:.x........xx..................:x..x...x....:x:...... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 9496879 NA +7328 chr4 + 190214555 37008472 37008471 37008688 217 GCATTGTTGA-AATTGAAATGTCATAGCCACACTGCAGAAGAGAGACATCCACCAGTCCTCATTAGACAACATAGCTGTATTAAATCCTGCTCTCTTCAGAAGCCAAGACCTATGCATTC-CTTCATGAATAGCTTTTAAAGGTTAATTAAAAGCAGTGAGTAATAAAAATTTATAAGCTTCTGCTTATA-ATTTTTAATGGTACCATTTCTGACCTTTT chr4 - 94230402 22094182 22094181 22094385 72136018 72136017 72136221 204 GCATCTTTGAGAACTGAAATGTCATGTTCACTCTAGGAGAGAAAAGAATCCTCAGGTGCTCATTAC------------TACTAAAAAGTGTTCCCA-CAGAAACCAAACCACAAGCCTTCTCTACATGATCAGCGTTTAAAGGTTAATTAACAATAGTGAGTGATAAAAATTTATAA---CCTGATTATATATTTTTAATAGCATGATTTCCAATCTTTT ....:x....-..:...........:x:...x..:x:::...:.::x....x.x:..x.......x------------..:....xxx..:..:.x-.....:....:x.x:.x..x...-..x.....x:...x................x.::.......:..............---:...x.....-.........:.:.:x.....::.:..... 10M1I55M12D18M1D23M1I56M3D10M1I29M 149/201 74.1% 204/94230402 0.0% 19/201 9.5% 14914290 NA +3047 chr4 + 190214555 37079364 37079363 37079426 63 TTGAAG---AAAATATTTTAGCAGTTTCTCCCATGAACAGTTTTTTGTTTGTTTGTTTGTTTTTGC chr4 - 94230402 21034557 21034556 21034622 73195781 73195780 73195846 66 TTGAAGGACAAAATAAATTTTTGGTTTCTATCTTTTATAATTTTTTGTTTGTTTGTTTGTTTTTGC ......---......xx..xx::......x:.x.xx.:.:.......................... 6M3I57M 50/63 79.4% 66/94230402 0.0% 3/63 4.8% 16044807 NA +3124 chr4 + 190214555 37079370 37079369 37079423 54 AAAATATTTTAGCAGTTTCTCCCATGAACAGTTTTTTGTTTGTTTGTTTGTTTT chr4 - 94230402 60784232 60784231 60784285 33446118 33446117 33446171 54 AAAGTAGTATTGGAGCCTTTCCCTTGAAGGGTTTTTTGTTTGTTTGTTTGTTTT ...:..x.x.x.x..::.:....x....x:........................ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -23704862 -70525540 +3174 chr4 + 190214555 37093843 37093842 37093888 46 TTGCTTGTTTTTTTTTGTTGTTGTTGTTTTTTGTTGTTGTTGTTGT chr4 - 94230402 15906306 15906305 15906351 78324052 78324051 78324097 46 TTGGTTGTTTTTTTTTGTTGTTGTTGATTTTTTTTATTGCTTTTGT ...x......................x.....x..:...:.x.... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 21187537 NA +3122 chr4 + 190214555 37112448 37112447 37112488 41 TTTTTTTTGTTTTGTTTTGTTTTTTATTTGTTTGTTTGTTT chr4 - 94230402 23073762 23073761 23073802 71156601 71156600 71156641 41 TTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTTT ......:.............x....:...........x... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 14038686 NA +3160 chr4 + 190214555 37112455 37112454 37112506 52 TGTTTTGTTTTGTTTTTTATTTGTTTGTTTGTTTGTTTTTTGAGACAAAGTC chr4 - 94230402 71609803 71609802 71609854 22620549 22620548 22620600 52 TGTTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTTAGACAATATC ......x.x......:..:...............x..::..x......x:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -34497348 -59733054 +3135 chr4 + 190214555 37134396 37134395 37134445 50 CCTCACTTTTCTTTTTTTTTTTTTTCTTTTTTATTTGTTTTTGTTTTTTG chr4 - 94230402 10030765 10030764 10030814 84199589 84199588 84199638 50 CCCCACTTTTCTTTTTTTTCTTTTTTCTTTTTACTTTGTCTTGACTTTTG ..:................:.....::......:..xx.:...x:..... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 27103631 NA +3015 chr4 + 190214555 37143866 37143865 37143903 38 TTTCTTTTTTTTTTTTTTTTTTTTTTAGTGTTCTCTTC chr4 - 94230402 52451233 52451232 52451270 41779133 41779132 41779170 38 TCTCTTTTCTTTTTTTCTTTTTTTTTAATGTTCTCTTC .:......:.......:..........:.......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -15307367 -78923035 +3150 chr4 + 190214555 37159428 37159427 37159502 75 AAAACATATGTGTGTGTGTGTATATATATATATATGTATATATATATGTATGTATAGAAAATCCTAAGAGACAAG chr4 - 94230402 52579771 52579770 52579845 41650558 41650557 41650632 75 AAGATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAAACAAGGTGAAAAATAAG ..:.:.::...........:.................x..xxx.x.....x.xx..:..x.xxx.:.:.:.:... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -15420343 -78810059 +3204 chr4 + 190214555 37163025 37163024 37163084 60 TCCCAGGCTCAAGCGATTCTCCTGCCTCAGCCTCTTGAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197140 18197139 18197199 76033204 76033203 76033263 60 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.::..:.....:.x...x.xx.x........:.::..:......:......x...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 18965885 NA +6943 chr4 + 190214555 37219334 37219333 37219563 230 CCTTTAAATTGGGCAGAATGCCCAGAAATAAAGCTTCTCTGACTAGTTATAACTAATG-TTATCACCGTTACCTCTTCCCTTCAATTATTTAGGCTTCCCCCACACATGGACTGGATTCCTACTGACAGGAATGTGGAACTCACTCATTAATCATT-----TTCTTGTCTCTGGCAGCGGAGGAAGGGAGGGA--TGCTCACTACCAAAAATAGAA---TGCCTTCTCTCTCTGATAAATA chr4 - 94230402 22153384 22153383 22153624 72076779 72076778 72077019 241 CCTTTTATTTGGGCAAATAGCCAGGCTATGAGGCCTTTCTTATCAAGAGGAACTAATGGCTGCCTCTGTCATTTTTTCCCTTCAATTATTTAAGCTTTTCCTACACTCAGGTTGGCTTCTTGCTGGCAGCACTGTGGACTGCATCTATTAATCATTGACTGTCATTGTATTTTAAAAGAAGGAAAGTGAAAAAATTGCCTAAGAATAAAAATAGAAATTTCCTGTTTTTTCCTGACAAATA .....x.x.......:.xx...x:.xx..:.:..:.:...x.::.:xx:x........-:.::.x.:..:.::.:.................:....::..:....x::.::...x...:.:...:...x.x......x:x..:::..........-----.:x....x.:.x:x.:x:::.:...x..:::.--...::.xx.x:..........---.x.:x.:.:.::....:..... 58M1I97M5I32M2I21M3I22M 148/230 64.3% 241/94230402 0.0% 11/230 4.8% 15065950 NA +3137 chr4 + 190214555 37233558 37233557 37233634 77 GAAACAAGAGTGAAACTCTGTCACAAAACAAAACAAAACAAACAAACAAAACAAAACAAAAAAACC------TAAAGTATAAT chr4 - 94230402 25002862 25002861 25002938 69227465 69227464 69227541 77 GAAATAATGAAGAAGCTTGACAATAGAA------AAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCAT ....:..x::x...:..:x::x.:.:..------................................------....:...x.. 28M6D32M6I11M 56/71 78.9% 77/94230402 0.0% 12/71 16.9% 12230696 NA +3245 chr4 + 190214555 37233568 37233567 37233627 60 TGAAACTCTGTCACAAAACAAAACAAAACAAACAAACAAAACAAAACAAAAAAACCTAAA chr4 - 94230402 83846353 83846352 83846411 10383992 10383991 10384050 59 TGAAGCT-TATTTTAAAACAGCAAAAAACAAACAAACAAAACAAAACAAAAAAGACTTAA ....:..-.:.:x:......:x.x.............................:x..x.. 7M1D52M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% -46612785 -47617617 +3436 chr4 + 190214555 37233582 37233581 37233631 50 AAAACAAAACAAAACAAACAAACAAAACAAAACAAAAAAACCTAAAGTAT chr4 - 94230402 15215974 15215973 15216023 79014380 79014379 79014429 50 AAAACAAAACAAAACAAGCAAACAAAAAAAAACCCAAAAACCCAGAGAAT .................:.........x.....xx.......:.:..x.. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 22017608 NA +3011 chr4 + 190214555 37241799 37241798 37241870 72 ACCTGGATCCTGGCTCTGCCATTAACTCATTATGTGACCTTGAACAAGTCATTTCACTTGTTTTGAGTCTTG chr4 - 94230402 42405704 42405703 42405775 51824628 51824627 51824699 72 ATCTGACTCCTGGTTCTGCTACATGGTTTTTAAGCAACCTTGAGCAAGTTACTTCATTTCATTTTAGACTTG .:...:x......:.....:.:xx:x.:x...x.::.......:.....:.:....:..xx...x..x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -5163905 -89066497 +9712 chr4 + 190214555 37244928 37244927 37245251 324 GCGCTTCGGGCTCGGAGCGGCTCTGAGCCGCGCCGC-------CTGCTGAGATCGACCGCCTGCTGAGCCGTTCCGTGGAGCTGCGGGCAGGAACCCGAGGAGCAGGAGGTGGCGG-CGGCGGCAGTGGCTGTTCCTCCCAGAGGGCGATGTGGCCGGCCGGCGCGGGCACCAAGCTGCCCTGTCCCCGAGACTCTGCGCTCCGGCGGGCGGCTTTCTCTGGGAACCTCACGGCCCTGCCCTCTCACCTCGTGCCCGCCGGCCGCAGCGTCCGGGTCTTCATCAGCGCCAACCCTGAAGGTA-----CGTCCCTCGCTCGGGTTTGCCCGTCCGTCC chr4 - 94230402 22170647 22170646 22170949 72059454 72059453 72059756 303 GCGCTCCGGCTCCGGCGGCGCTCGGAG--GGGCCGCATGGGCGCTGCCG-----GAGAGCC------GCAGCTCCGTGGCGCGGCCCGGGGGCTGCCATGAAccggggcccggcgggcggcggc---------------------gccATGTGAACGGCCGGAGCGGGCGGCAGGGCGGCGTGCCCGCGGGACGCGGCGCTGCGCAAGGCGGCCTTCGCCGGCAACCTGGCGGCGCTGCCCGCCCACCTGGTGCCCGGCGGCCGGAGCGTCCGCGTCTTCATCAGCGCCAACCCCGAAGGTAAcggccgggccccgccgcggctccccctgccgccc .....:...x::...x.xx....x...--.x.....-------....:.-----..xx...------..x.:.......x..x..xx.x:..xxx..:x.:.x.:..:xx:.....-.......---------------------..x.....:x.......x......:x..:.x:.x.x..:..x..:...x.x.....x..xx:......:...x.:..x.....x:....x......x.:.....x.......x......x........x....................:.......-----..xx..:...:xx..:.:x...xx...:.. 27M2D7M7I6M5D7M6D49M1I7M21D157M5I30M 212/290 73.1% 303/94230402 0.0% 47/290 16.2% 15074281 NA +3009 chr4 + 190214555 37313674 37313673 37313722 49 TTGATGAGTTTTTTGTTTGTTTGTTTGTTGTTTGTTTGTTTCTGAGATG chr4 - 94230402 60784255 60784254 60784303 33446100 33446099 33446148 49 TTGAAGGGTTTTTTGTTTGTTTGTTTGTTTTATTTTTGTTTTTACAATG ....x.:......................x.x.x.......:.:x:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -23470581 -70759821 +3045 chr4 + 190214555 37317986 37317985 37318039 54 GGAGCTGCTCTAATTTCTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTG chr4 - 94230402 84092423 84092422 84092476 10137927 10137926 10137980 54 GAATCTGCTTGCATTTAATTTGTCTATTTTCTTTCTTTTTTTCTTTTTTTTCTG .:.x.....:xx....xx...x...x................:........:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -46774437 -47455965 +7147 chr4 + 190214555 37325922 37325921 37326065 144 TCTTTCTACTACAGATACGGGAGCAGAAAGACAGGCGCTAAGAGAAAATGTATATCCTAAACTGAGAGAATTCTGCAGAGAAAACTATGGATTGGAATTTCAGGTA----------ATTCTAGTGTTAATTTCATTCACAGTTATGTCCAGTTA chr4 - 94230402 22192009 22192008 22192161 72038242 72038241 72038394 153 TTTTCCCAACACAGATACCATAGCAGAAAGGAGTGCCCTAAGAGAGCATGTGTATCCTAAGCTGAGAGAATTCTGCAGGGAAAACTATGGGCTGGAATTTCAGGTAGGTTTTGTTGAATCTTGTGTTAAGATAA-CCACAGTTTCTTGCAATTA .:..:.:.x:........x:x.........:x:x..x........:x....:........:.................:...........::..............----------.x...x.......xx.x.-:.......x:x.x..:... 106M10I18M1D19M 112/143 78.3% 153/94230402 0.0% 11/143 7.7% 15133913 NA +3324 chr4 + 190214555 37348626 37348625 37348699 74 TGTGGTTAATTCATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964811 14964810 14964884 79265519 79265518 79265592 74 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..x:.:x..x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 22383815 NA +3241 chr4 + 190214555 37348634 37348633 37348700 67 ATTCATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x::.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 28952838 NA +3222 chr4 + 190214555 37348637 37348636 37348701 65 CATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964820 14964819 14964884 79265519 79265518 79265583 65 CACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 22383817 NA +3297 chr4 + 190214555 37348637 37348636 37348696 60 CATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395803 8395802 8395862 85834541 85834540 85834600 60 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....x.:..:...x..:....:...::x..:..xx...:...............x..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 28952834 NA +3242 chr4 + 190214555 37348638 37348637 37348703 66 ATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 8395796 8395795 8395861 85834542 85834541 85834607 66 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..:.:.::...x.:..:...x..:....:...::x..:.:xx.:.................x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 28952842 NA +3404 chr4 + 190214555 37348638 37348637 37348704 67 ATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACT chr4 - 94230402 14964819 14964818 14964885 79265518 79265517 79265584 67 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACT .:.:.x....:.x.:::.:.::.:.::.:...:........xx........::.............. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 22383819 NA +3304 chr4 + 190214555 37348639 37348638 37348702 64 TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 28952840 NA +3328 chr4 + 190214555 37348640 37348639 37348698 59 ATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx...................x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 28952836 NA +3095 chr4 + 190214555 37348641 37348640 37348691 51 TATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -50798539 -43431863 +10643 chr4 + 190214555 37356359 37356358 37356513 155 TCCCCAGGTCATAGATCTGTACTGGGGAGTGGAAGAAGATGAGTGGGACAGCCCAGAGCTCCAGAAGACCCGCATGAAGCTGCTGGAGAATTGCTTGAAAACTTCTGCAGGTCCATGTTTTGTTGTGGGTATAAAAAAACTAATGCTTTATATTA chr4 - 94230402 22196947 22196946 22197098 72033305 72033304 72033456 152 TTTCCAGGTCATAGATTTATACTGGGGAGTCGAGGCAGATGAATGGGACAGTCCTGAGCTGCAGAAGACTCGCATGAAGCTGTTAGAAGATTGCTTGAAAAGTTCTGCAGGTCCATGTTTTGTTGTGGGTATAAAAA---TAATGTTTTCCTTTA .::.............:.:...........x..:.x......:........:..x.....x........:............:.:..::............x...................................---.....:...x:x... 137M3D15M 131/152 86.2% 152/94230402 0.0% 3/152 2.0% 15159412 NA +13431 chr4 + 190214555 37430554 37430553 37430793 240 TTTCTTGTTGATACACAGGGACTATTAGGTGAAAAATATGGGAATATCCGAATCCCTGGAGAAGTTGAAGCCTCAGAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGAACTCGGTGCCAGCAGCCTATTACCTCAGACCCAAGTCAGAAATGCTGAGAAGCAATAGAAATGCAGTAAGCTGCCTTTCCCTC chr4 - 94230402 22212845 22212844 22213084 72017319 72017318 72017558 240 TTTCCCGCAAATACACAGGGTCTACTGGGAGAGAAGTATGGGAACATCCGCATCCCAGGGGAAGTGGAGTCAGCTGAATTTGAAATGATCCTGGATGCCGCTGTGGAGGCCAAGCTAGAGACCAGAATTATAGAAGAGTGGTACTGCAGAGATGAGAACGCAGTGCCACCAGCATATTACCTCAGGCCGAAATCTGAAATGCTGAAGAGCTACCAGAATACAGTAAGTCGCATTCTCCTC ....::.:x:..........x...:.:..x..:..:........:.....x.....x..:.....x..:x.xx.x..:...........::..........::.:.....x.....:.......::x.xx.:..:...........:x...........x.:......x....x...........:..x..:..x..........::...x.:x::...:.......::..x..::.... 240M 181/240 75.4% 240/94230402 0.0% 0/240 0.0% 15217709 NA +8845 chr4 + 190214555 37433867 37433866 37434029 163 TTTCTATAGATGCAGCCTTCTACCAATGCTGAAAACGAGAAGACATGGCAAGAGATATCAGATGAGATCAAGAAGATATTTAAGGCTGCTGTAAAGCTGTTACACGAAAAGGGTAAAATGAAACACAGCCAGGCTAAGAGGTACCTGTTCTCAGGTAATTTTC chr4 - 94230402 22214261 22214260 22214423 72015980 72015979 72016142 163 TTTTTAAAGATGGAACCTTCTTCAAACTCTATGAATGAGAACAAATGGCAAGATATATCAGAAGAAATAAAGAAGATTTTTAAGACTGCTGTGAAATTGCTGTATGAAAAAGGAAAAATGAAACATAGCCAAGCAAAGAGATATCTCTCCTCTGGTAAAGTTC ...:..x.....x.:......x.x..:x..:x:..:.....x.x.........x........x..:..x........x......:.......:..::..:.::.:.....:..x...........:.....:..x.....:..:..x.:...x.....xx... 163M 124/163 76.1% 163/94230402 0.0% 0/163 0.0% 15219606 NA +40264 chr4 + 190214555 37438777 37438776 37439395 619 ACTCCTTCTTATATTTTCTTTCAGCTATAGAGGATGAGTTTGACTTTGCTCTGGGAAAACAAACTCCAGCATTTCTAAAGAAGTGTGTTTGCTACATTAGGAAAATTGCTAACATTGAGCGCTTTGTGAAAATCCCAGAGATGGGAAAATACATGGATATAACTGGAACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCCTACTATTGTTGCATCATCTAATCTGAGAGTGTACACATCTGTTACTCATTGTGACATGAAACTAGGCTACTCCCAAGAAATAGAAAATCATTACATCGAAGGACTTGGTAAACAATTTTATGAGGACATGATTGATATAATTCAGGCAACGATACAACAGAATTTTGACACTGAAACTGATACACTCTATGATGAAATCCTTCAACATTCATCATTATGTAAAACATACGCCTCCTTCTATGAGTACAAATGTGAATCTCTAAACATAGTGCATAACTACATTCTTCCAAGCAAAGCTGGACACATCAACCCTCTTATTATATATGGTGGGCCATGCACTGGGAAGACCCTTCTGCTAGCTGAAGTAGCAAAGAAGGTAAA chr4 - 94230402 22214700 22214699 22215318 72015085 72015084 72015703 619 ACTCTGTTCTCTTTTCATCCTCAGCTATTGAAGATGAACTTGACTTTGCCTTGGGTAAACAAACACCAGCTTTCCTAAAGAAGTGTGTTTGCTACATTCGGAAAATTGCCAACATTGAGCGTTTTGTTAAAATTCCAGAGATGGGAAAATACATGGATGTAGTACATACAGCTGGGAAGTTTCTACGAGATCCCGAAGCTCATGAGAAACTAATCAAGCTCAGGGATGAATTCATTCCTACCATCGTTGCATCTTCCAATCTGAGAGTGTACACATCCGTCACTCACTGTGACATGAAACTAGGGTACTCCCAAGAAGTGGAGAATCATTACATTGAAGGACTTGGTAAACAGTTCTATGAAGACATGATCGATATAATCCAGGCGACAGTGCAGCAGAATTTTGACACCGAGACAGACCTGCTGTATGATGAAGTTCTTCAACATTCATCACTATGTAAAACATACTCCACTTTTTATGAATACAGATGTGAGGCATTAAACATAGTTCACAAGTATGTTCTACCTAGCAAAATAGGACACATTAACCCTCTTATCATATACGGAGGACCATGCACAGGGAAAACTCTTTTATTAGCCGAAGTGGCAAAGAAGGTAAA ....:x.::.x.x..:x:::........x..:.....::..........::....x........x.....x..:........................x..........:...........:.....x.....:........................:..::xx:x....xxxx..:.x..x.x..:..:..x.....:..x.....:..:..x..:..............:........:..:........x..:....................:..:.....:.................x............:.:..:...........:.................:..:.....:........:........:.....:..::.:..:..............:..:..x..:x::..x.........:.:...............:..............x..x.:..:.....:....:......:x.x:..........x..:..x..::....x..x......::x........:...........:.....:..x..:........x.....:..:...:.::....:.....:.............. 619M 502/619 81.1% 619/94230402 0.0% 0/619 0.0% 15224077 NA +235878 chr4 + 190214555 37443273 37443272 37448588 5316 TTTGTGTTTCAGGCTTATGGCTGGCTACATGAGGACACAGGACCAGAATCTGACCCAGTAGTCATCGTGAGATTTCTAGGAACGACAGACATGAGCTCTGACCTTAGGACTCTCCTTCTAAGTGTTTGTGAACAATTGGCAGTTAACTACCGGTGTCTGGTTCAAAGCTACCCTAAGAAGATCCATGACCTCTGTGACTTATTTATAAATCTTTTGAATGAGTCTTCACTGCAGAGACCTCTAGTCATAATATTCGATGCACTAGAGCAGCTCTCAGAGAATGATGATGCCAGGAAGCTTTGGTGGCTCCCAGCTCACCTGCCCCGCTTTGTCCGGATAGTCCTTTCCACGCTGCCCAACAAACATGGGATCTTGCAGAAACTAAGGTGCCTTATCCATGAAGAAGACAACTACATCGAGCTGATTCCCCGAGACAGGAAGATGTGCAGCCAGGTCCTCAAACACCAGCTGCTGCGCGTCAAAAGGAAGGTCACATCAGGCCAGCAGATTTATGTGAACAATGCATTATCCAAGTGCACACTGCCAATGTTTGTGAACCTGACCTTCAGGGAGGTGAGGCACTGGAGATCTCACAAAGACGTCGATGAATCCTCCCTCTCTGTCACCGTTCATGAAAGTATAGAGCAGTTATTCTGGTCCTTGGAGAAGAAGTGTGGTCAGAAACTGGTCTCTAGGGCTCTTGGTTACATCACCATGGCCAAAATGGGTCTGAGTGAAATGGAACTGGAGGATGTGTTAGCCCTAGACAACAGTGTAATGAGTGAGCTCAAAGAAAACACCAGACCCAGCAATCCCCTGAGAGTACCTTACTTGTACATTGCAAGGCTCAAGGAGGGTCTCAGTGGATACCTAATAGAAAGACATGTGAAAAATGTCACACTCCTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACCTGCGTGAAATGCACACCATCTTAGCAGATTATTTTCTGGGGGTTTGGTCAGGGGGCAGGAGGAAAGCCTTCTGCCTTGAGGACCCCTACTTGAATGGCTGCCTTGACTTGGAGAACAGAAGTTTGCTGGAGGAAGAAAAGCACTTCATGGAACAGGCTTCCTTTGACAGGCAGGCTCCAGACCAGCCCTGGGTTTTCCAGTGTAATCCCCTGGAACCTGACATCTTTTTCGTTAATCATCGGAAAATGTCTGAGCTGTTGTACCACTTGACGAGGTGTGGAAAAACCGATGACCTGCTTTACGGCATCATCATGAACTTCAGCTGGCTTTATACCATGATCAAAATTGGCCAGTTTGACAAAGTGCTTTCAGACATTGAGCTGGCTTACAACTACTCGCAAGAGAAGGAGCTGAAGTTCCTGGCCAACACCCTCCGCAGCATCAAAAACAAGGTCACTGCATTTCCCGGCTCCCTTTCAGCAGAGCTTCAGCAAAGACTGCTGCCTGTTGTAAGCTCCCTGCCCAAACTTAGACATCTTCTTTTAGAGTGTGATAAAGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCTTCCCTTATCATCCAGTCACCTGCATGTCACAGAGATCCTGCCTACCTGTAACCCCAGCACTGTCCTCACAGCTTTAGAAAATGGTTCCATCAGCACCTGGGATGTAGAGACTCGACAGCTACTCAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGGCATGAAACTCACCAGTGATGAAAAGTACCTTGTGGTGGCTACAACAAATAACACCTTGTTGATTTATGACAATGTCAATTCTTGCCTCCTGTCTGAAGTAGAAATCAAGGGGACCAAGCAT---------GGAAGCAGCGCCACCTACATCAATGGATTTACACTGTCCGCCAACCACGCCCTTGCATGGCTCGAAGCCAGCAAAGATGTCACTGTCATCGATCTGCTGTACGGATGGCCGCTTTACCAGTTCCACTGCTGGTATGAAGTGACGTGCGTCCAGTGCTCCCTGGATGGTCTGTATGCTTTCTGTGGCCAATACCTGAACACAACCACCATATTTCATTTAGGGAGTGGAGAAAAGTTATGTACAGTGACATCAGAATTTTCAGGTGGATTTGTGAAGTTTCTTCTTATCTTGGACACAGCTCAGGAAATGGTCATGGTAGACAGTGAAGGAAGTCTTTCTGTTTGGAATACTGAGGACATTTCCAGCCCCCAGCTGACTGATGACTTTGATTGCCGAAGAGAAGACAGTGAGGTGGTCAGCATTGAGCTTTCAGAAGACCAAAGTGCAGTTCTGATCTGTAAAGCCCTCAGCATTGAGCTCTTAGATACTGGTCTGTGGAAGGTGGCTGAAAAGTTCAGAGCCAAGCACAACGAACGCTTTATATCTGCCGTGCTGTCTAAAAATGGAGATTGTATCATCGCCACCATGGAAAATACCTCAGCTGTGTTTTTTTGGAGGCGGGACACAGGACAGTGTATGGCAAGCTTGCAGGAAATCTCAGGTTCCATTGTTAAGTTAGTGAAATCCAGTCACCACAATATGCTACTGTCTTTATCAACCAGTGGTGTTCTTTCCATTTGGGACATAGATATAATCACAGCTATGTCCAACATAGATAAGACTGGAAAACCCATCCAAAGTCTGTTGTTGCCTGCTAGAGGGGAAATCATTTACTCCCTGGATGGATCCGATTGTGTTCATAAGTGGAACTTCAGCAGTGGCTTCATCGAAGCAGTATTCAAGCATGAAGGAATAGTTGAACACTGTGTGTTAACATCCACCGGAGATATAATGGTGACATCAGATGACAAAAGCAGCCAGTATGTCTGGCACACCAGCAGTGGTGAAAACCTTTTTCGAATTAACGGGCAGAGAATATCTCAGCTGCTGATTACACACAATGACCAGTTTGTGGTCTCGCTCTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGCAGAATGCCTTTATTACCTCCGCAAATACCTTCGTGGTGGGAATGACTAAAAGCAAAGTGTTGGCAGTCAGTCTTTGGACAGGAAGTATCACCAAGAAATTTTGCTGTGAAGATGGGACCACCATCGTGAATTTTAAATTAATCCCTGACTGTCCTGATATCATCGTGTTTATCACATCGGCCGAGACTGTGAACATCTGGAGTCTGACAGATGAAGTGATCTGTCGGCGCGTGCAACTTCCAAACAACTTCTTGAAAAATCTGGAGGACTTTGAAATTTCTCCCAATGGAAAGCTAGGCATTATAGCCAGGGGAGATGAAAACATCAATGTGCTAGATTTATACAGTGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGTTGTCTCGGGATGGTCGCTACCTGGTATACATTTGTTTCCGAAATGGGGAGGAGGAGGATGAAAATGGTGCAATATTCAGTTTAATTGTAATGAGACTGGCAGATGGCAAAAATATCGGTGCTTGTTCCCTTTACAAAACACCAACTTTCCTTGCACTCTCCCAGAGGCACCTGAACATCATTGTGGGCTTTGATGATGGGAGTATAGGGATCTACACGGTAGTAGACCGTGTAGATGCTGCACTGAAAATCAAAATTGCCACTTCAAATAGCAGACAAATTTTCAACAATGCAACACACACCTCCAGGCCAAAGTGTAACAGTTATTGTTTTAAAATATCTGTGGATTGCTTATGGAGAGAGTCCACTGAGGTCTTTGCAAGAGACAGCCCCATCACAGTTAGTGACTCTACTGAGTCCAATGAAGCAACACCCTCCAAGAAACACAACTCTTGTTATGAGCGGGTATGCTCGGCCCTAGAAGCCAGGGGCCACAGCTATGCCCCTGATAACTGACAA---AATGTTTTCCAGCTAAGCAGAAATATGTGATCCACGTACAGAAGGGAAAAAAATGTGCC--------CCAAATGATAAACTATTCATTTATTAAAAGGCAGGAGCGAT-GCTGGAATTCCAGTGTTTTATT------AAGATGTTCATG------------------------------------------AAATGG-----------------ACAAATAGGTTAGTCTTGG---GTGTGGTCTTTTT------------GTCAAAGTGTA-TCCAGAATGTC----------------AGAATTTCTAGTAGTAATATTTAAATGGTTACTTCATCTGAAAGG--------------CAGAGGCTAAAAG--TTTTTAAATTAG----------CTGTGTGGTGAGGCAGCATAATACATCCCACTGGTTAAGATGAGAGAGGCTAGAGTTATATACAGATCATTTGGATGGGAATTAGTTCTACAAAAATCAGCTGAAATCATGAAGA----CAAAGAGCTGCTTGACTTCAAATGATTGTGTGATAAGTAAACA--------CAGCCTTAATCTCTCTTTACATTTTACAGTCCT-----GACAACTGTGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGACCTGAAACATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCTACTGAACATGGAGAGTCAGTCTTTATTAAAAGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTAT-------AACAGAATATATGATTTTTAAACTATTTCCTGGGTTGCAAAAGAACACA----------------TTTAGTAAGAAACAACAATCTTTTCGCATCTTTTTGAAATGCATATTTGTGCTGGGTGTAAAGAAGATT-------ACAGGAAGGGCATTACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTGTACTATTTGGTCAGTTTGTATGGAAGCATAAA-TATTCCCTAAATTCCTGCAGTTAGTCTTCATAGAAAGCAAGCTTTCTCAACATGCCATCTCTGAGATACTGATGACGTTTGCCTTACTCACATTCCTTCTCTTTCCTGTGTAAAATGCAGAT-AGATGACCAAATACTCTGGGATAAACTGAATATGCCTGTCTTTGTGCTAAAATATTCCA-TAAATCTTAAGGGTGTCCAAAAGTTCTTTATTGTCCTTGTTTGTAA--TCACTTTCTTACTTCTACACACCATCTGTATGCTTCTTTATCTGTTACTCTTCCTGATTGAGGACTCTTCTGAGCCTTT--TATAGTCCTATCCATTTCAAAGCAGAAGCTGTGGAATGGTATTAAATATTTTTTAAAATT---AATTCACCTGTTTAAAAGAAA------ACATTGCATCTCAAAAGGTGAAGATGATTGTTCTTTCTTCCATATCCTCCTTACGGCATGTCCTTGGATAACTTTTCAAAAGG chr4 - 94230402 22216828 22216827 22222187 72008216 72008215 72013575 5360 TCTGTATTTCAGGCCTATTCCTGGCTGCAAGAAGAGATGGGACCTGATTCTGACCCTGTGGTAATTATAAGATTTTTGGGATCCACTGAAACAAGCATAGATCTGAAGAATATACTTCAAAGCATTTGTGAACAATTAGCAGTCAACTATCGTTGCCTCGTGCAAAGTTACCCAAAAAAGATTCATGACCTTCGGGATTTGTTCATAAATCTTTTGAATGAGTCTTCATTCCACAGGCCATTGGTGATAATATTCGATGCCCTAGAACAGCTAACGGATAGTGATGATGCTAGGAAGCTTTGGTGGCTTCCCATTCACCTTCCCCGTTCAGTACGGATAATTTTGTCAACACTGCCAAACAAGCATGGAATCCTGCAAAAACTGAGGTGCCTTATTCATGAAGAAGACAACTACATTGAATTGACTGCAAGGGACAGAAAGATGTGTAGCCAAGTACTGAAACATCAGCTGCTGCGAGTTAAAAGAAAAGTAACATCAGGGCAACAAATCTACGTCAATGAAGCATTCTCCAAGTGCACACTGCCTATGTTTGTGAACTTAACCTTCAGAGAGGTCAAGAACTGGAGATCCCACAAAGACGTGGATGAGACCTCCCTCTGTGTCACAGTACATGAAAGCATAGAGCAGCTGTTTTGGTCACTGGAAGGTAAATGTGGATCACGACTACTGTCAAGAGCACTTGGCTACATCACTATGTCCAAATCTGGCCTGAGTGAAATGGAACTGGAAGATATTTTGGCCCTTGACAACAGTGTTATGTATGAAGTAAGTGAGAGTATCCGAGAAAGTAACCCACTGAGAATTCCGTATGTATACATTGCAAGGCTTAAGGAGGGTTTGCAGGGATACTTAATAGAGCGACAAGTGAAAAATGTTACCCTTCTTCTTTGGGCAAATAGACACTTGCACCTAATTGCCCAGAAATTGTATCTGAACAATGAAGAAGATTTGCAGGAAATGCACATGATCATGGCAGAATATTTTCTTGGTGTTTGGTCAGGTGGACGAAGAAAACCTTTTTACAGCAATGACCAATATTTGAACAGTTGCCCTGACCGTGGTAGTAGAGGCCTGAATGAGGAAGAAAAGCACTGCATGGATCAGATTGCTTTTGACAGGCAGGCGCCTGATCAGCCATGGGTTTTTCAGTGTAATCCCTTGGAGCCTGACATCTTTTTTATCAATCATAGAAAAATGACAGAGCTTATTCATCACTTGACAAGATGTGGAAGAACAGATGATCTGCTGTATGGAGTCATTATGAACTTCAGCTGGCTGTACACCATGATTAGAATAGGGCAGTTTGATAAAGCACTTTCTGACATAGAACTGGCTTACGCCTACTCGCAGGAAAAGGAACTGAAATTTCTGGCCAGTACCCTCCGCAGTATCAAGTTCAAAGTAGTAAAATACCCAGGCTCACTCTCTGCTGAGTTGCAACAGAGGCTTCTGCCAGTAGTAAGTTCACTGCCTAAACTCAGACATCTCCTCTTAGAATGCGACAAGGACGGGCCCAAGTACTGCTCTATTGTCCCCTTGCATTCTTCCATGGATGTAACTTACAGCCCTGAGCGCCTGCCACTGTCATCCAGCTGCATGCATGTCACTGAAATTCTGCCTACTTTTAATCCCAGTACAATCATCGCTGCTTTGGAAAATGGTTCCATCAGCACTTGGGATGTAGAGACTCGACAACTACTGAGGCAGATTACAACCTCTCCATCTGTTATCATAGGGATGAAACTTACTAGTGATGAAAGGTATCTTGTAGTGGCTACAACAAACAACACTCTTTTGATATATGATAACATAAATTCCTGTCTTTTGTCTGAAATGGAAATTAAGGGGTCAAAACATTGTGGATTAGGGGGGGCCTCCAGTTTTATAAATGGGTTTACATTATCAGTCAATCATGCACTTGCGTGGCTGGAAGCCAGCAAAGATGTCACTGTAATAGACCTTCTTTATGGCTGGCCTCTCTATCATTTCCACTGCTGGTATGAGGTAACCTGTGTTCAGTGTTCTCCAGATGGAGTTTATGCCTTCTGTGGACAGTATCTGAACACAACAACCATTTTTCACTTAGGCAGTGGAGAAAAGCTGGCCACCGTGACCTCTGAATTTTCTGGTGGATTTGTGAAATTCCTTCTCATTCTGGACAAGGCCCAAGAAATGGTGATGGTGGACAGTGAAGGCAGCCTCTCTGTTTGGAATACAGAGGAGATCACAAATCCCCAGCTTACAGATGACTTTGACTGCAGGAGAGATGACAGTGAGGTTGTCAGCATAGAGCTTTCTGAAGACCAAAGTGCAATTTTAATTTGTAAGGCTCTCAGCATTGAGCTTCTTGACACTCATGTGTGGAAGGTAGCTGAAAAGTTTAGAGCTAAACACAATGAGCGCTTTATATCTGCTGTGTTGTCCAAAAATGGCAACTGTATAATTGCTTCAATGGAAAATACCTCAGCCATTTTTGTTTGGAGAAGAGATACAGGACAGTGTATGGCAAGCTTACAGGAAATCTCAGGAACTATAGTCAGGCTAATTAAATCAAATCATCATAACATGCTGCTATCTTTATCCACCAGTGGTGTCCTTTCTATCTGGGATATAGACATCATAACTGCTATGTCCAATATTGACAAATCTGGCAAACCTATCCAAAGACTGGTGTTGCCAGCCAGAGGTGAATTAATATACACATTGGATGGATCAGATTCTGTCCACAAATGGAACTTCAGCACTGGATATATTGAAGCTATATTCAAGCACGAAGGTATTGTTGAAAACTGTGTGCTGACCTCTTCTGGAGAAATAATGGTAACATCAGATGATAAATGCAGCCAGTATGTGTGGCACACTGTTAGTGGCGAAAACATCTTTCGCATTAACGGGCAAAAAATCTCAGAGCTAATGATAACTCATAATGATCAGTTTGTAGTCTCCCTCTGTGAGCAAAATGCATCCAGAGTTTGGCGACTGGCCACAGGACATAGGGTTTGCAATATTTTAGTTGCCTTACAGAATGCATTTATAACAACTGCAAATACATTTGTGGTTGGAATGGCAAAGAATAAAGTGTTGGCAGTGAGTCTCTGGACAGGCAGTATAACCAAGAAGTTTTGCTGTGATGATGGTGCAAGCATTGTAGATGTCAAACTGATACCTGACTGCCCAGATATTATCGTATTTATAACATCTACTGAAACTGTGAACATCTGGAGCTTAACAGAGGAAGTGATCTGCAGACGTGTACAACTGCCTACCAATTTCCTGAAAAATTTGGAAGACTTTGAAATGTCTCCAAATGGCAAGCTAGGAATTATAACCCGTGGTGATGAGAACATCAATGTGCTTGATCTACACAGTGGAAAACTTCGTGTAGTTCATGCTCCAGGTATTATCTGGCGGCAAAGGCTGTCTCGTGATGGCCGCTATCTTGTGTACATCTGTTTTCTCAAT------GAAGATGATGACAATGGTGCAATCTCTAGCTTAATTGTAATGAGGCTAGCGGATGGCAAAAACATTGGTGCCTGTTCTCTTTATAAGACTCCCACTTTCCTTACACTCTCACAGAGACATTTAAATATTATTATTGGATTTGATGACGGAAGTATAGGCACTTACACTGTAGTGGATCGAGTCGACGCGGCACTGAAAATCAAAATTGCTACTTCAAACAGCCGTCAGATTTTCAACAACACAACACAAGTGATTAGACCAAAATGTCACAATTATAGCTTCAAAGTGACTGCAGACTGCATATGGAGGGAATCAACTGAAGTGTTTGCCAGGGATAGCCCCATTACAGTTATAGAAC---CTGAGGTGAGTGAAGCAACACCAACCAAAAAACACAACTATTGCTATGAAAAGGTGTGCTCAGCCATAGACTGCAGAGGACACAGTTTTGCTGCTGACAACTGAGTATTTATCGCCGACTAGTTTACCTGAGTAATAGTATACATGCATAG-----------ATTTGTCTTCTGAATTCAAGTAAAAATCAGTGCATTTCTTGGAAGACATTAACAGCAGAGGGCAGACCAGCTATTTTTTCCTTTACAAATATTCTTACATTTACGTACACAAACACGCaaaaataaaaaaaataaaaataaatGGGGGGAAGGGAACATGAAGCAAATATTTAAGCAATGGGCTGCAGGGTTTTTTTTTATTTTCGGAAGACAAGGTTCAGTCCAAGATTTCACCAGGGCCTTGATTAACAATTTCTAGCAATACTTTCAAAATTGTTATGCTATTACAGAGGTTCGCTGATCTTATCTGCGATTGACAGACTGCTTTAACTAGAGCTAAAGTTCCATGTGATCGGAAAGAA-GAGGCAGACCACTGTTTATAAT-----AAACTA-AGTCGCCTATAAGT------GGTCAGAGCTGAATCTATAGCTAACAGCCAACTTTATATCCACTTGCAAAAATGTATATTTCTT-GCTTGATGGTGCAATGACAAGATGTCACCTGCCAACCTGGAACACTTGATACATTCCATCATCattttaaaaatactttttttttttttttaattGGGATTGATTTAGGGGGTTGAAAGGCGT-----AGGTACCAG---------CCAGCTGC-----AAATGTGAC--AATATGTGAGGTGGTA--------------AATACTTGTTCACCTCAATGAAAGGACTA--AAAC------------TTTTTTTTTAACTGCA--TGCAGGGATTTCA------GGTTTCTGTATTGTGATATATAAAAAAAAAGATATTAAACCTAGATCAT------CAAAGGAATATAGAGTTGGGTTTTCGTTTTTGGTTTGAGGAAGTTAT--------ATGTCTTCATAGTGTGTGTTAGTATAGGTCATTAAGAAAACTTTTTCAAAGACAAAGGGCATTGCAGATA-AACATAAACAAATATGAATTTAT----TTATGTTAAAAGATGGCTATCCATTTTGA------TGTAAGAAAGTCTAAAGTATCTCCTATGTTCCCAAAG-TACTCTTAACAGAAAG-----TTTTCAGACATGCCATGTTTTA-ATCTTAAAAACATTTGCCTTACTATCATTTCTGTTCTTTCCCACGTTAAATACAGATCAGATGACTAAACACTCTGGGAC----------CGCTTGTATATGTGCT--AATTCTCCACCAAATGCAAATGCTGCCCAAAGGTTCTCTATTGTTCCAATTTGTAATGTGTTTTTCTTAC-------------CTACAAGCTT------------CACTTTCTGCTTTAGAACT-GTCTGAGCCTTTTGTACAGTTTTATCAGTTTCAAGGCAGAAATTGTGAAATAATGACAAATGCTTAAAAAAAATTCCATTTCGTCCAAGTGAAAGAAATGCTGGACAT--CATTTGAAAGCATAAGAAGATATCTCCCTCCTTACGTATCTTAAAGATGGCACATCTGAGGAAAATTTTTCAAATGG 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1878M9I1596M6D358M3D107M3I41M11D7M8I41M1I22M6I12M42I6M17I19M3I13M12I11M1I11M16I45M14I13M2I12M10I18M1D22M5D6M1D14M6D42M4I18M1D24M8I33M5I53M5D9M9D8M5D9M2D16M14D29M2D4M12D16M2D13M6D11M7I31M6D12M16I19M8D42M7I21M1D23M4D29M6D16M1I20M1D16M5D22M1D57M1I22M10D16M2D9M1I46M2I12M13D10M12D19M1D12M2I60M3I21M6I4M2D77M 3825/5153 74.2% 5360/94230402 0.0% 370/5153 7.2% 15226445 NA +22856 chr4 + 190214555 37449100 37449099 37449449 350 TTAGGCAACACATTCTCATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATGCCTAGATGGA-TTAAATGTAGTATGTGAATGTTCTATGTAAAAGCCAATAGAGTATAC-AAGTGACTTGAATGATTTTTCCTAACTTGTTTGCAACTGATAGCTCATATTGAATGTTTTTATGTAAACTTTGTATCGTTGGGAAGAATTACCCAATCAGAGATTTATATTTTCATAAATGTTACATTTAGTTAAATTTTGTTACAGAGTTGTTACACTAGAAAATTATTTCAGTCTTCAAACAATATACAGTCTTGTGTATGTATTATTTGTATGAATAAA chr4 - 94230402 22222189 22222188 22222533 72007870 72007869 72008214 345 TTAAACAAAACAATTTTATTTTTAAAATGA-------GAACTTCATGCCACAGATTTCCAAGAAATGAATGCTAAGCTGGAACTTAATGTAGTGTGTGAATGTTCTATGTACAAGCCAATATAGTATATTAAGTGACTTGAATGATTTTTCCTAACTTGTTTGCAACTAATAGATCATATTGAATGTTTTTATGTAAACTTTGTATTGTTGGGAAAACCTACTGAATCAGAGATTTATATTTTCATAAATGTCAAATTTAGTTAAATTTTGTTACAGAGTTGTTAAATTAGAAATCTATTGCAGTCTTCAAACAATATACAGTCTTGTGTATGCATTGTTTGTACTAATAAA ...::...x...x.:.:...::.:xx..x.-------:.x..:.........x.....:.....x.:.....:x..x....-:.x........:.................x.........x......:-......................................:....x................................:........:.x:...:x............................:.x..............................x.:......x:....x................................:...:......:x...... 30M7D44M1I47M1I222M 296/343 86.3% 345/94230402 0.0% 9/343 2.6% 15226911 NA +3401 chr4 + 190214555 37458108 37458107 37458173 66 CTAACCACCTTAATTTACAGGTGAGGAAACTGAGTCTCAAAGAGGTTAATTGATTTGTCCAAAGTC chr4 - 94230402 10729197 10729196 10729262 83501141 83501140 83501206 66 CTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...x.x:.:::.x..........:.:........x.x..x.x.......x.:.....:...:.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 26728911 NA +3107 chr4 + 190214555 37481466 37481465 37481517 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTCCAAGATCAAGG chr4 - 94230402 1220224 1220223 1220275 93010128 93010127 93010179 52 AAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAAGTCCCAGTTCTAGG .............x....x....x...:...x.:........x..x..x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 36261242 NA +3622 chr4 + 190214555 37544933 37544932 37545009 77 ACAACCTCTGCCCCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGTACCAC chr4 - 94230402 18197128 18197127 18197202 76033201 76033200 76033275 75 ACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...:..:xx:x.::.:...........x...x.xx.x........::.............:....--.:..:..... 65M2D10M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 19347805 NA +3911 chr4 + 190214555 37566659 37566658 37566734 76 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGTTGG-ACTACAGGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.............x...x.xx.x........::.......:...-......x......... 60M1I16M 59/76 77.6% 77/94230402 0.0% 1/76 1.3% 19369533 NA +3199 chr4 + 190214555 37584981 37584980 37585026 46 GCTCTTTTCTCCTTTTCTTTGACTTGTTTTTTTTTTTTTTTTTACT chr4 - 94230402 80716159 80716158 80716204 13514199 13514198 13514244 46 GCTCTTTTCTTCTTTCCTTTGGCCTATTTTTTTTTTTCATTTTGCT ..........:....:.....:.:.:...........:x....:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -43131178 -51099224 +4199 chr4 + 190214555 37588805 37588804 37588935 131 TCACTCACTGTGTTCTCTACCTTTTACGCTTTCTTTTCCAGGTGGTAACAGAAAACAATCCAGATGGGGTGCAGGTGCTGTAAAATAATACAAAGGTAAAGCTGGAGAAATACTACTTCTAAATGGAGGAA chr4 - 94230402 22272281 22272280 22272403 71958000 71957999 71958122 123 TCATTTCCCTTCTCCCTTGCCTTCCCTTTCTCTCTTTTCAGATTA------AAGAAAATCCAGATGGGGTGCAGGTGCTGCAAAATGATACAAAGGTACAAT--AAAAGATGTTTCAACTGAATAAAAGAA ...:.:x.:x.x.:.::.:....::x:x::.:::...:...:.x:------..:.x........................:.....:...........x.::--:.:.:..::.x.xx..:...::.:... 45M6D51M2D27M 80/123 65.0% 123/94230402 0.0% 8/123 6.5% 15316524 NA +6979 chr4 + 190214555 37590086 37590085 37590997 912 AGCTATCTCTTTGATCCAGTTCAAGTGCCCTCTCCTGGCTATGTCAATGAAGTCAACAGCTGCAAGCTAGATGAAGACGACACTGATAAATTAAAAGGCAAATGGAGCAGTGAAGTCTTGGTGCAGAAAAATGACCCTCAGAGGCAGGGCTCAAAGAAGACTGAGAGCAGCAGCAGGACAGCTGATCCATGGGAGCCCTGCTGGCCTCACCAAGG-GCCGCTCCCACAGGGGGACGC----TGGAGGGGAACACCATGCCTGCGGT----GTCAACGGCATCGGCCCTGCTGCCACTCCACAGCCCACTGGGAATTCCAGCCCCACCC------AGGATGACAGGGG---------CTCCTG--GGCCAGTA----------CTGCAAATACTG--TTCCCCCAACTCAACCCTTCCTGGAAGGAGGGGGCACCAGGAAACAGGACTGTGTGCTGCTGGCCTCAGAAGG---GACCCAAGTCA-------------TGAGAAATGGAGACTCCAGAGCTCCTTCTGAGGCAGAAAGTTTTGCCTTGGAAGTACA-------AGACC----------ATGTCTTCCAGATACCAGCCCCAGATTACCTTCAGCATTGGGGCCCAGCTGGAGACAACGTTGATCATAATGAAAAGGACTGTGTTTTCAAGAACCATACTGA------------GGATGAATCCCTAGAGGGAATTCAGCCCCCAGTGGGGGAGCATGGTTTGAATACGCCCTTCTCTGTGAGGAGAAGCTGG---GATTCATTGAATGAGGATGTGGAAACAGAAGTTCTAAGCATCTGCTTTAATGAGAAGGGTCC------TGTTCATGCCATGCCTGTGGTTGACTCAGGAAACAGGCAGGAGGATACCCATGGCTCCGATGGAGATGGGGATGGGGAGATTGTGGACGAGGATGCAGCGGTGGCGGAGGCCCTTGCAGCTTTAGAAGCTGCTACTGCAGGAGAAGATTTGGATGAGACTGAT chr4 - 94230402 22273430 22273429 22274380 71956023 71956022 71956973 951 AGCTACATTTTTGATCCAGAAGAATTACAATCGCCTGGATGCACTCATGAAGGAAACAGCTACAAACAAGATGAGCAAAGAAGCAATAAATTCAAATTCAAACAGAACTGTGAAATTAAAGAACAGAAGAAAGAAATCCAGAAGGATGAGCTAAAAGGAACAGGAATGAAAAATCGGGTAAATAGCACAGGGGAGACCCTCTGGAATCACAGAGGCGATGCTTTTCAAGATGACAGCCTTGTGAAGTGTGTTGCAAAGCACGATGTTGCAGTCAATGGCAGCAACTCCCATGCTGGTGTGCACCCCATTCTCAGCCCCAGCACAAACTCAGCGAAGGAAGCCAGTGAACAGAGCACCTCCAGCCAGCCAGCAGAGCCTTCTTCAGTCAACACTGGAGACTTCCACTCCAAACC------GAATGAGTGTG-GCCAAGAGCTTGACCTAGGAGCAGGCAGTCACAGGAAGGCTGACTGCAGTCAGACAAACAGTATTCGAGGTGTGAAGCCCT----GGTCTATAGAAGATAGCAACTTTCTCAAAGGAAGTGCAGTATTGGAGACCCAAAATAATGATGCCATAAAACTGCCAGATATAGATTATTGCCAAAATGGCAATCAAATCAGGAACTATGT---------TGAAAAAGATAGCATTTCAGTCAACTATACACATCCAGACCAAATGAATAAACATTTAGC---AATGCAGGGCCAA------GACCTTCATGTAACCCCACCTTTGCAAACGAAGGAAAGCAGTATCGAGCCGTTTAACACTGACTCTGCAG------------------GCTTGAGTGAAGACATTCCCAATGGCATTGCTGCCATGGCTGTGCCCACAGCAGCA------CAGGCACCCACACATCACAGCCACAGAGACATCAATGGACAAACTGAGGAGGAAGATGCAGAAGTAGCAGCAGCTCTGGCTGCACTGGAAGCTGCAACTGCAGGTGAAGACCTGGAAGAGGATGAT .....:x.:..........xxx..x.:.xx..x.....x.:::::x......xx.......:...:.x......:x.x::x.x::.......x...xx....::..:.x.....:.:xx:.x:.....:..x..xx::....:.x.x.:x::...::::..x.::.xx.:x.::x..::.:x.:::x..x.....x..:x....xx....x:...-.x:...:::xx..:x.:xx..----..:..x.x:x::.x.x..x:.xx..----.....:....x.::.:.:xx...::x.x::..x....:.xxx.:::.....x.x.x.:------....x.x...x.:---------....x.--:.....:.----------.x.:x..:....--xx.::...x::...x..------...x...x.x.-:...:..:x:x.:x..:x.x..x.x::.:.x...:.:.---...:xx.....-------------:...:x:..:..x.::----.x..:x.xx:..::..x..x...:x.xxx......:..-------.....----------...:.x.xx.:x.:....x:x:......::x:..:x..x.x:::.x.::::.::..x.:..---------......:..:x.::...:x:xx...:....xx.------------.:..:..:x::...x---...x...xx..x.------..x.x.x:.x.:.x:x.:..:..x:xx::..:.::....x.x---..x:.:..x..::xx..:x:x.x.:------------------....x.:...::.x:x...------::..xx.......x.....x:::xxx...x.------....x:xx:..x...x:.xx.x.::....::xx:....:x.:.:..x...x..:.......x:..:..:.x:..:..x..x..x:.:........x........x.....::....x...:x.... 215M1I21M4I25M4I58M6I13M9I6M2I8M10I12M2I17M6D11M1D38M3I11M13I16M4D38M7I5M10I61M9D33M12I15M3D13M6D42M3I25M18D19M6I31M6D126M 496/859 57.7% 951/94230402 0.0% 145/859 16.9% 15316656 NA +3021 chr4 + 190214555 37596701 37596700 37596765 65 AAACTGGGCATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865450 4865449 4865514 89364889 89364888 89364953 65 AAAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTT ...x.:::x..............x.:x.x...x.x.x.:.........x..x....x........ 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 32731251 NA +3289 chr4 + 190214555 37596705 37596704 37596760 56 TGGGCATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x::..x.....:...:..:.:...............:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -55138643 -39091759 +3453 chr4 + 190214555 37596708 37596707 37596762 55 GCATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735349 92735348 92735403 1495000 1494999 1495054 55 GCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ......x.....:...:..:.:........x......:.x.........:.x... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -55138641 -39091761 +3003 chr4 + 190214555 37596711 37596710 37596758 48 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735403 1495000 1494999 1495047 48 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....:...:..:.:..........x....:.x.........:.x... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -55138645 -39091757 +3039 chr4 + 190214555 37596712 37596711 37596764 53 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:......x.x......:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -55138639 -39091763 +3053 chr4 + 190214555 37596712 37596711 37596762 51 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200277 4200276 4200327 90030076 90030075 90030126 51 ATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ............:.:.:..............::...:xxx.......x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 33396435 NA +3502 chr4 + 190214555 37596824 37596823 37596906 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCACGTAGCTGGAATTACAGGCACGCGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........:.x...x.xx.x........::..x..........:....--.::..:....:::. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 19399698 NA +3007 chr4 + 190214555 37598228 37598227 37598304 77 GGGAAACAAAGTGCAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTATAGGAAGAAAATATA chr4 - 94230402 59582156 59582155 59582232 34648171 34648170 34648247 77 GAGAGAGAACATTCACAGCTTCCTCAAAAAAAAAAAAAAGAAAAATTAAAAAGATCAACATATAAAGTGAAAATATA .:..:.x..x:.x..xxx..x:.................:.....xx.....:.xx.::x....:::x......... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% -21983928 -72246474 +3142 chr4 + 190214555 37603792 37603791 37603880 89 AGTGCTGGTTGCTTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGAGACAGAGTCTCACTCTGTC-ACCTAGGCTTGAATGCA-ATGGCA chr4 - 94230402 39858681 39858680 39858769 54371634 54371633 54371722 89 AGAGACGGTTG--TTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGACAATGACTGTTACTTTGGCTGCCTATGCCAAAATTAAGATGGCA ..x.x:.....--............................x..x..x.xx..x.x.:...:..x.-:....x..:x:...xx.-...... 11M2D53M1I17M1I6M 67/87 77.0% 89/94230402 0.0% 4/87 4.6% -2254889 -91975513 +3013 chr4 + 190214555 37603801 37603800 37603839 39 TGCTTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGAG chr4 - 94230402 72617517 72617516 72617555 21612848 21612847 21612886 39 TGCTTGTGTTTGTTGTTGTTGTTTGTTTGTTTGTTTCAG .....x.x............................x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -35013716 -59216686 +3018 chr4 + 190214555 37603804 37603803 37603840 37 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGAGA chr4 - 94230402 4472007 4472006 4472043 89758360 89758359 89758396 37 TTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCAGA .....x...........................x... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 33131797 NA +3592 chr4 + 190214555 37604857 37604856 37604973 117 ACACACACAGACAC-------------ACACACACATACACACAGACACACACACAGACACACACACACACACACAGACACACACACACAG------ACACACACATACACACACAGAGACACACACATACACACA chr4 - 94230402 73121078 73121077 73121213 21109190 21109189 21109325 136 ACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ....x......x..-------------:..::..:..x..:...x.:.:.....x.::..::x::...:..::.:..::....:x::.:.x------...:.:.x....:.x..............::..:.x:.. 14M13I64M6I39M 76/117 65.0% 136/94230402 0.0% 19/117 16.2% -35516221 -58714181 +3160 chr4 + 190214555 37604923 37604922 37604979 57 ACACACACACAGACACACACATACACACACAGAGACACACACATACACACAGTACTT chr4 - 94230402 33416706 33416705 33416762 60813641 60813640 60813697 57 ACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACAGAAGACCT ..:..:x.x......................::.......xx.x.....x.:x..:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 4188217 NA +3878 chr4 + 190214555 37605752 37605751 37605962 211 AAAAGAATAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAA-----------GGAAAGAAAGAGAAAGAAAGGAAG------AAAGAGGAAGGAAGGGAGGGAGGGAGAGAGAGAAGGAGAGAAAGAGGAAGGGAAGGAGA chr4 - 94230402 18962280 18962279 18962502 75267901 75267900 75268123 223 AAATGAATAACTAAAAAGAG-GATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAAGTGCTACTGCTTCTGGGTTCCAAACTGAATAGAAAAAAATGAAGTATTATAATTAGTAGAAAATGGATGGAAGGAAAAGGAGCGTG-----AAGTGTAAACAAAGGAGA ...x......xx...:....-..x::..x..:x...x:.xx.:....:..:.xx...:-.:.....:.:x......x....:..:x..xx:.x..x....:.....x....x.....x..:x.xx.xx:-----------x:..xx:..x.....:...x....------..xx..x.:::..x...x...:...:.::...x:x.-----...x.x..:x:....... 20M1D37M1I70M11I24M6I36M5D18M 133/205 64.9% 223/94230402 0.0% 24/205 11.7% 18643472 NA +3148 chr4 + 190214555 37605767 37605766 37605828 62 GAGAGAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237699 9237698 9237760 84992643 84992642 84992704 62 GATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x.x..x.:......:..:x..x::...:.....:....:....:..:...:....::... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 28368068 NA +3091 chr4 + 190214555 37605795 37605794 37605893 99 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAA chr4 - 94230402 61334701 61334700 61334799 32895604 32895603 32895702 99 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x......x.x.:::..x::x.:.:...:.x:.:.........:. 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% -23728906 -70501496 +3275 chr4 + 190214555 37605808 37605807 37605894 87 AAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAAA chr4 - 94230402 10424987 10424986 10425074 83805329 83805328 83805416 88 AGGGAGAGAAATGAAAGGTAGAAAAAAAGAAATCAAGGTGTGTCAGAGAGGAAAAGGATGGGAAATGGAGGAATGGGAGTAAAAGGAA .::..:.....-.....:x.....:.......xx...:x.x:xx...:.:......:.x.:....x.:.:...x.::..x..:..:.. 11M1I76M 59/87 67.8% 88/94230402 0.0% 1/87 1.1% 27180821 NA +3184 chr4 + 190214555 37605818 37605817 37605892 75 AGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGA chr4 - 94230402 17708405 17708404 17708479 76521924 76521923 76521998 75 AGAGAGAGTGATAAGCAGAACAAAGGCAGGAAGAGAGAGACCAAGAACAAGTAAGGTAAGAAGGGGAGAAAGAAA ...:...:x..x.::x....x:..:.x.....:...:.::xx.....x:..x....x.......::.......:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 19897413 NA +3275 chr4 + 190214555 37605832 37605831 37605902 71 AAAGAAAGAAAGAAGGAAAAGAAAAGAAAAGAAAGAGAAAGGAAAGAAGGAAAGAAAGAGAAAGAAAGGAA chr4 - 94230402 25066985 25066984 25067055 69163348 69163347 69163418 71 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA .....x...x.....:..x.:x.:...:x:.:.:x....:..:..:..:........:::x......:... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 12538847 NA +3863 chr4 + 190214555 37605947 37605946 37606095 149 GAGGAAGGGAAGGAGAGAGGGAGGGAGGAAGGAAGGGAAGAAGGAAGAGAGGGTAGAAGAAAGGAGGAAGAGAAAGAGAAGGAAGGAGAA-AGAAAGAAAAAGAAGAAAGGGAAGGAAGGAAAAAGATGCAAGAAAGGGGAAGGATGGAA chr4 - 94230402 44053988 44053987 44054130 50176273 50176272 50176415 143 GAAGAATGGA-GGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGT---GGGCGGATAAAGG---AAGAAAGGAGAGCAGTGAGA ..:...x...-.....:..::.:.:....::x...::..x::...:.x.:.xx.x........:.:.....x...:.x:.:x.x::....-........x..x:x:....x---..:x...x....:---........:..:x::..::. 10M1D79M1I20M3D13M3D20M 93/142 65.5% 143/94230402 0.0% 8/142 5.6% -6448041 -87782361 +3696 chr4 + 190214555 37606081 37606080 37606193 113 AGGGGAAGGATGGAAGGCAAGAAGAAGGAGGAGGAGGAGAAGGAGGAGGAGAAGGAAGGAAGGGAGAGAGAGAAAGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAG chr4 - 94230402 55334390 55334389 55334494 38895909 38895908 38896013 105 AGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATAT----ATAAGGAAGGAAGGAAGATACAGAAAG----GAAAAAAAAAATGGGGCATGAGGGAAAAGAGAG ..::..x....:::::.:..xx.....::.::....:..x.:x.x----.x............:...x.x......----....:......x..:.x.x..:.:..:.:.... 45M4D27M4D33M 72/105 68.6% 105/94230402 0.0% 8/105 7.6% -17728309 -76502093 +3287 chr4 + 190214555 37606108 37606107 37606239 132 GAGGAGGAGGAGAAGG---------AGGAGGAGAAGGAAGGAAGGGAGAGAGAGAAAGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGGAAAGAAGACAAG chr4 - 94230402 89963534 89963533 89963674 4266729 4266728 4266869 141 GAAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAAAAATCGAAGAGGAAAAG ..::.....:::..:.---------..x.x.....:x.:xx.:::..:..:x...:.:.:xx.......x.....x.......x...x:.x:...::x::xx:x:...::..:..:.:..x:.....xx:....:..x... 16M9I116M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% -52357426 -41872976 +3322 chr4 + 190214555 37606115 37606114 37606189 75 AGGAGAAGGAGGAGGAGAAGGAAGGAAGGGAGAGAGAGAAAGAAAAGAAAGAAAAAAAG-----GAGAAAG-AAGAAAGAA chr4 - 94230402 79555903 79555902 79555983 14674420 14674419 14674500 81 AAGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAGAATGTAAGAAAGAA .:..:..:xx.::...:x:..::..x........:....:..........:........-----x....x.-......... 59M5I7M1I9M 57/75 76.0% 81/94230402 0.0% 6/75 8.0% -41949788 -52280614 +3136 chr4 + 190214555 37606155 37606154 37606229 75 AGAAAAGAAAGAAAAAAAGGAGAAAGAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGGAA chr4 - 94230402 87603519 87603518 87603593 6626810 6626809 6626884 75 AGGGGATATGGGAAAAAAAGAGGCAGAGGAAAGAAAGAGAGGTATGAAAGACAGGGAAAGATGAAGAAACAGTAA ..:::.x.x:.:......:...:x...:............::x.x......x..::::.:.x:......x..x.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -49997364 -44233038 +3018 chr4 + 190214555 37607472 37607471 37607512 41 AGATATTGTAGGGTTTTCTTGTTTGTTTTTGTTTTGTTTTT chr4 - 94230402 60194330 60194329 60194370 34036033 34036032 34036073 41 AAATATTGTAGGGTTTCTTTTTTGGTTTTTGTTTTGTTTTT .:..............::..x..x................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -22586858 -71643544 +3348 chr4 + 190214555 37618827 37618826 37618898 72 CTCCCTGCACCCTCTTGATTTTTGTTTGGTTGGTTGGTCGTTTTTCTTTTCTTTTCTTTTCT---TTTCTTTTGA chr4 - 94230402 87951237 87951236 87951306 6279097 6279096 6279166 70 CTCTCTGCG-----TTGGTTTTTGGTTGGTTGGTTGGTTGTTTTTTTTTATTTTTTTTTCCCTGATTTCTTATAA ...:....:-----...:......x.............:......:...x:....:...:.:---......x.:. 9M5D48M3I10M 54/67 80.6% 70/94230402 0.0% 8/67 11.9% -50332410 -43897992 +4259 chr4 + 190214555 37620910 37620909 37620996 87 CCCTACGAAGTAGTAGTAGTATTATTATCCCCACTTAACAGATGGAGAAGCTGGGGCATC--AGAGGCTAAGTAATTTGCCCAAAGCTA chr4 - 94230402 80987841 80987840 80987928 13242475 13242474 13242562 88 CCCTGCGAGGTAGGTA-AGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCA ....:...:....xx:-....x..x......:.:..x........:...:...:.....:--........x..:.:........:.::. 16M1D43M2I27M 66/86 76.7% 88/94230402 0.0% 3/86 3.5% -43366931 -50863471 +7121 chr4 + 190214555 37631406 37631405 37631546 141 TTCTCTCTTCACAGGTGTTGCCGGCACCTCCCCATTGACGGTTTCAGCCCCACTAACAGACATCAGGCTTCTCCGTTCCTTCTGGTTTGACTTGTGCTCCACTTTTGTAACTCTAAATCTGAGGGGGGAATGGGGAGAGGT chr4 - 94230402 22289811 22289810 22289951 71940452 71940451 71940592 141 TTCCTGTTTGACGGGCGTGGCAGGCATGTCACCATTGAGGCCCTCCACCCCAGTAACAGACATCAAGCTTTTCCGTTCTTTGGAATTAGACTTGTGCTCCACTTTTGTGACTCTAAACCTGAGGTGACAAAAAAGTGAGAT ...::x:..x..:..:..x..x....:x..x.......x.x::..x:.....x............:....:.......:..xx::..x....................:........:......x.:x..x:::.x...:. 141M 103/141 73.0% 141/94230402 0.0% 0/141 0.0% 15341595 NA +3698 chr4 + 190214555 37632247 37632246 37632329 83 CTGCAACCTCCACCTCCTGGGTTTAAGCGACTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGCCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.......:...:.x:..x.xx.x........:............:.:....--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 19435121 NA +10240 chr4 + 190214555 37634880 37634879 37635148 269 ATCTTACCTGCCAACAGAAAGGACCGTGACCTCGCCTTGGCGCCGTGGTCTGCTCTCTCTGGACTTGTTAGTGGGCTTTATAAAGTGCCACCGCTTGTGCCTACACCGATGACACACATCCCTCTCGACAACACCGCCCACCGTATGCAGATGATGGCC---ACAGACGTGCTTCCCTGGCGTCCCCCCTGGTGACAAAGG---CCCAGGACTCACTGGCGGGCTCCCTGGTGTGCTGGGGGTCACGGGGCTAATGTGGG---GAGGAAAACAAAAAG chr4 - 94230402 22290591 22290590 22290865 71939538 71939537 71939812 275 ATCTTACCTTCCCACAGAAAGTACTGTAACCTCTCCAAGGCGACTTCTTCTGTGCTCTTTGGATTTGTGAGCTGGCTTTATATGATGCCATCGTTTGTGGCTACAGCGAGAACAAACATCCTTCTCTATTACTCCTCCAACAGTATGTAAGTGATGGCCTTTGCAGTTGTGTTTAAGTGAAGCAGCACCAGGTGACAAAGGAGACCCTGGACT---TGTTGGACTTCCAGGAGCGTTAGGAGACATGGGGCTAGAGGAAGTATAAAGGAAACACAGAG .........x..x........x..:..:.....x..xx....x.x.xx....:x....:....:....x..:x.........x::.....:..:.....x.....x...x:...x......:....x.:x..x..x..x..x.....:.::........---:...x:...:..xxx..:x.:xx.x..x...........---...x.....---..x:..:..:..x..x.:.:.:..:.x..:.......:x.x::.---:.:.:.....x.:.. 159M3I39M3I9M3D44M3I15M 189/266 71.1% 275/94230402 0.0% 12/266 4.5% 15344289 NA +4889 chr4 + 190214555 37638437 37638436 37638525 89 GAGCACTCACCTTTCAGGATCATACAGGCTGTTATCTGCTACCATCGCCTTTAAGACATCAGCATTCGC--TAAGGAATAAAAATAAAATT chr4 - 94230402 22293312 22293311 22293402 71937001 71937000 71937091 91 GAGCAATTACCTTTCGGGTTCAAAGACACTGCTATCTGCTACCATGGCCTTTAACACATCAGCATTTGCTGTAATGAGAATAAATAGAATT .....x.:.......:..x...x.x.x:...:.............x........x...........:..--...x..:x.x.....:.... 69M2I20M 72/89 80.9% 91/94230402 0.0% 2/89 2.2% 15345125 NA +5021 chr4 + 190214555 37647364 37647363 37647442 79 ACACCTTCATTTTTCATGATGTAGTGGACGATTTGCCCAACAGTGTCACTGTTTTCATTCACACTGTCATTCAATTCTG chr4 - 94230402 22294581 22294580 22294659 71935744 71935743 71935822 79 ATACCTTCATTTTTCATAATGTAGTTAATAATTTGTCCTACAGTGTCACTATTCTCATGCGCAGTTTCATTCATTTCTG .:...............:.......x:.::.....:..x...........:..:....x.:..x.x.......x..... 79M 64/79 81.0% 79/94230402 0.0% 0/79 0.0% 15352783 NA +9185 chr4 + 190214555 37649267 37649266 37649462 196 GTTATTTACCTATCTTTTCAAC---CTTTTCCTCTTCGATATCTTGCTCTGCTTCTGTTGTACAACGATAGCCTTTCTTCTTAAGCAGGTGGCAAATGAGGACGCCAAAGAGACCCATGATAAAGAACACAGGGACAAGCGCGTATGCAATATATTCTGGGTGTCCATTCCCAGTATCGTTGCTGGGCGACGGGGTCGT chr4 - 94230402 22296432 22296431 22296630 71933773 71933772 71933971 199 GTTGATTACCTATTTTTTCATCAGGCTTTTCCTCTTCCTCTACTTCTTCAGCTTCTGTTGTACAACGATACCCCTTTTTCTTAAGGACGTGACAGATGAGGATCCCCAAGAGACCCATGATGAAGAAAACAGGTACCAGTACAAAGGCAACATACTCTAGGTGCTCAGGCTTGTTATTATTGCCAGCTGTCACAGTAGT ...:x........:......x.---............xx:xx...x:..x....................x..:..:........x.x...:..:.......:x..x..............:.....x.....x..x..::.:x.x....:...:...:....::..xx.:::x...::....::.x:.x.:x:..x.. 22M3I174M 143/196 73.0% 199/94230402 0.0% 3/196 1.5% 15352835 NA +3477 chr4 + 190214555 37658464 37658463 37658564 101 CTTCACAGTAAACCTATAAAAT-GGTTACCAGTGTTATCCTCACATTACAGATGGGGAAACAGAAGCATAGAAAGGTCAGGCAATATTCCCAACATCAAGGT chr4 - 94230402 10729166 10729165 10729267 83501136 83501135 83501237 102 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGT .:.....:..xx...:.:.::.-...x.::.x.:.:.x.::..:x......:....:....x..:...:.x.x....:.:.:...x.x....:x:..x:... 22M1I79M 65/101 64.4% 102/94230402 0.0% 1/101 1.0% 26929298 NA +3604 chr4 + 190214555 37697695 37697694 37697766 72 CTGCAGCCTCCATCTGCCGGGTTCAAGCGATTCTTATGCCTCAGCCCTCCAAGCAGCTGGGATTACGGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:xx.x..x.:.........:.x...x:.x.x.......:.:....:......:.:...:x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 19500569 NA +3013 chr4 + 190214555 37699116 37699115 37699180 65 CTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAGAAAGAAAAAAAGAA chr4 - 94230402 49250037 49250036 49250101 44980302 44980301 44980366 65 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAA ..:.:..::.xx.........:..........:.:.x::.::......:..:...:xx...x... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -11550921 -82679481 +3186 chr4 + 190214555 37699128 37699127 37699199 72 AAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAGAAAGAAAAAAAGAAAAAAGATTTTCTCCTAGAG chr4 - 94230402 61875818 61875817 61875889 32354514 32354513 32354585 72 AAAAAGAAAAAAGAAGAAAAAAAGAAAATTAATTTAAACAAAGCTGAAGAGAAAGGATTTTTTCTTCTACAG .....:......:..:............xx..xxx.:.x....xx:..:.....::.xx......:...x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -24176690 -70053712 +3656 chr4 + 190214555 37707822 37707821 37708034 213 CAAAACTGGTGCCATCCCTACTGAAGTTAATAGG--AGTCCAGCAGCACTGCATTCATATATATATATACACACACACATATATATGTACAGATACATACACACACATATGTACATATACATATACACACATATATGTACATATACATATACACATGTACACATACATATATACACACTTATATGTACACATACATATATACACACTTATATGTA chr4 - 94230402 73121020 73121019 73121213 21109190 21109189 21109383 194 CAGACTTTGGACCAACCCTACAGAAGTCATTACACCAGGAAAGTAGAACTGAAAC----------TGTACACCCACAGAAAC-----TGTAATCTCGTGTGCATGCATATT--CATACACATATACACAGAAGCATGAGTACATACGTATA----GGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:.x:.x.x:...x......x.....:.x..x:--..xxx..:..x....x.x:----------.:.....x....x.x.:-----.::.:x:x.:.:::..::.....x--....:...........x.x::...x::.:....:....----x......:x::....:.:x::..x....x:...:.x:...x.x.:.....:x....x.:. 34M2I19M10D17M5D24M2D38M4D60M 121/192 63.0% 194/94230402 0.0% 23/192 12.0% -35413198 -58817204 +3447 chr4 + 190214555 37707895 37707894 37707996 102 CACATATATATGTACAGATACATACACACACATATGTACATATACATA--TACACACATATATGTA----CATATACATATACACATGTACACATACATATATACACA chr4 - 94230402 73121106 73121105 73121213 21109190 21109189 21109297 108 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:::....x::....x...:.:...x.x:...:x.......:::...--.....:x:.......:----......x...::.x..::x.x...:....:....x:.. 48M2I16M4I38M 69/102 67.6% 108/94230402 0.0% 6/102 5.9% -35413211 -58817191 +3086 chr4 + 190214555 37707912 37707911 37707972 61 ATACATACACACACATATGTACATATACATATACACACATATATGTACATATACATATACA chr4 - 94230402 38535895 38535894 38535955 55694448 55694447 55694508 61 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA ...:........::.:...x:x...:.....:.....::.:......:::.....x:x... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% -827983 -93402419 +4031 chr4 + 190214555 37707955 37707954 37708118 164 TGTACATATACA-----TATACACATGTACACATACATATATACACACTTATATGTACACATACATATATACACACTTATATGTACAC----ATACATACACACATATATGTACACATACATATACACACATATATGTACACATACATTTAT-----ACACACATATAGTACATATAC chr4 - 94230402 73121075 73121074 73121250 21109153 21109152 21109328 176 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACAC--ATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACAC ......:x:...-----.:..xx.x:..:::...:.....x:.:....--....::...x.x:...:x:....:..x....x......----...::.:x::.......x:...:.x:...x.x........:...:x:..x..x:x:....-----.x.:..::x:..:x....:.. 12M5I31M2D38M4I60M5I21M 105/162 64.8% 176/94230402 0.0% 16/162 9.9% -35413120 -58817282 +3212 chr4 + 190214555 37708038 37708037 37708092 55 ATACATACACACATATATGTACACATACATATACACACATATATGTACACATACA chr4 - 94230402 38535895 38535894 38535949 55694454 55694453 55694508 55 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ...:........:..:...x:x.:.:.....:.....::.:......::...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -827857 -93402545 +3493 chr4 + 190214555 37708185 37708184 37708297 113 ACATATGTGTACAGATACATATACACACATATGTGTACAGATACATATACACACATATGTGTACAGATACATATACACACATATGCACAGATACGTATA----TACACACATATATG chr4 - 94230402 82359674 82359673 82359790 11870613 11870612 11870729 117 ATATATCTGGGAAGGAAAACATATGCACATGTGTTTTAATATATTTGTTTCCCTGCATGCGTAGAGATAAATATACACAAATATTCACAAATGCATGCAGCAGCCCGCACATGTATG .:....x..x:x..:x.x.:...::.....:...x.xx.x...:x.:.x:x.x:::...:...x.....x.........x....x....:..:.:.::.----:x.:.....:.... 99M4I14M 73/113 64.6% 117/94230402 0.0% 4/113 3.5% -44651489 -49578913 +3803 chr4 + 190214555 37708381 37708380 37708529 149 ATACGTATATACACACATATGTACAGATACGTGTATACACACATATGTACAGATACATACACATACATATGTACAGATACATACACCCATATATGTACAGATACGTATATACA----CCCATATATGTACAGATACGTATATACACCCATATA chr4 - 94230402 73121107 73121106 73121249 21109154 21109153 21109296 143 ATGCATATTCATACACATATACACAGAAGCATGAGTACATAC----GTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGA--GACACACATGTATAAGCAAATTTCCTTAT-TTTTCAGATACGCTCA---GCCCATACA ..:.:...x:.:........::.....x:.:..x:....:..----...:..:....::x::...::.:x.....x...x....:....:.x.--x...x.:.:.....x:..----:..x...-.x.x........:x:.---:......:. 42M4D47M2D18M4I7M1D16M3D9M 95/139 68.3% 143/94230402 0.0% 14/139 10.1% -35412726 -58817676 +3107 chr4 + 190214555 37738659 37738658 37738713 55 GTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGACAGAGTCTCACT chr4 - 94230402 10650381 10650380 10650435 83579968 83579967 83580022 55 GTGTGTATGTGTCTGTGCGTGTTCATGTGTGAGCGTGCTTGGATGGAGTTACATT ............x....:....x::......x.:...:..:..::....:x..:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 27088278 NA +3057 chr4 + 190214555 37738661 37738660 37738706 46 GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGACAGAG chr4 - 94230402 50558510 50558509 50558555 43671848 43671847 43671893 46 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAG ...:......x..........::.....:.:::...x......... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% -12819849 -81410553 +3633 chr4 + 190214555 37739039 37739038 37739121 83 CTACAGCTTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGAACTGCAGGCAGGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .......::xx:x..:.:.........:.x...x.xx.x:.......::...............:..--.:x.......:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 19541913 NA +3670 chr4 + 190214555 37750233 37750232 37750344 112 TATACATATGTACACATACACACATATATACGTATATACGTATACACACATGTATATATGCACACAAATATGTATATACGTATATACATATTACACATACACACACACATAC chr4 - 94230402 4417346 4417345 4417457 89812946 89812945 89813057 112 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x......:......:.......x:x.:.:::::..:x.x:.x::.........xx.x...:x:.:....::.:...:x...x..:..:::...x.:..xx...:.:.x.. 112M 69/112 61.6% 112/94230402 0.0% 0/112 0.0% 33332887 NA +3633 chr4 + 190214555 37761678 37761677 37761749 72 CTGCAACCTCCACCTTCTGCGTTAAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x......x...x...::x...x.xx.x........:..............:....x.... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 19564552 NA +3070 chr4 + 190214555 37777119 37777118 37777175 57 CTTCTTCTTCTTGTTCTTCTACTTCTTCTTCTTCATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193312 40193311 40193368 54037035 54037034 54037091 57 CTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTT ...:.:::...:xx....:....:..:xx:.....:................:.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -2416193 -91814209 +3116 chr4 + 190214555 37783419 37783418 37783483 65 GCGTGTGTGTGTGTGTGCATGCGTGTGCACGTGCATGCACACACACACACATACATGTGTAAAAC chr4 - 94230402 84262008 84262007 84262072 9968331 9968330 9968395 65 GCATGTGTGTGCAAACACAAAGGTGTGCACATGCATACACACACACTCACAGGCATGCACAGGGC ..:........::x:::..x:x........:.....:.........x....x:....:::.:::. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -46478589 -47751813 +4804 chr4 + 190214555 37798332 37798331 37798430 99 AATAGTATTATTCCCATTTTATAGCAGAAGAAACTGAGGC-TTAGAGAGAATTTAGTGACTTGCTCAAAGTCATAAAGCTAGTAAGTGGCAGAGCTGGGA chr4 - 94230402 80987857 80987856 80987954 13242449 13242448 13242546 98 AGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAG-GCTACGTGACTTGCCCAAGGTCAC-AGGTGAGTCAGTGGCAGAGCTGGGA .:.....x...:..:......:..xx.::...........-........-::.xx.........:...:....:-.:.:x...x................ 40M1I8M1D24M1D25M 77/97 79.4% 98/94230402 0.0% 3/97 3.1% -43189525 -51040877 +3245 chr4 + 190214555 37803907 37803906 37803968 62 TATAGCTCTGGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGAGATAGCTGGAG chr4 - 94230402 67798833 67798832 67798894 26431509 26431508 26431570 62 TATGGTTTTGGAGTTTTTCTGTTTGTTTGTTTGTTTTCTGGTTTTTTTTTGGAAAGGAGGAG ...:.:.:...:....x.:.................x:.x....x....x:..x..xx.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -29994926 -64235476 +3139 chr4 + 190214555 37810806 37810805 37810845 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 18828491 NA +3102 chr4 + 190214555 37810808 37810807 37810843 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -43818256 -50412146 +3353 chr4 + 190214555 37810808 37810807 37810847 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 18828493 NA +3627 chr4 + 190214555 37810810 37810809 37810851 42 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ....................................::..:. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 18828495 NA +3102 chr4 + 190214555 37810812 37810811 37810847 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -43818252 -50412150 +3253 chr4 + 190214555 37810812 37810811 37810850 39 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ................x...................::. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 18828497 NA +3161 chr4 + 190214555 37810814 37810813 37810852 39 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..............x.x...................:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 18828499 NA +10007 chr4 + 190214555 37829951 37829950 37830148 198 TTTTGTTTTT-CAGAATTCCTTAACTTTGGAGGCAGTGAAACGACTAATAGCAGAAGGTAATAAAGAAGAACTACGAAAATGTTTTGGGGCCCGAATGGAGTTTGGGACAGCTGGCCTCCGAGCTGCTATGGGACCTGGAATTTCTCGTATGAATGACTTGACCATCATCCAGACTACACAGGTACCATGTTTTTTATA chr4 - 94230402 22340833 22340832 22341031 71889372 71889371 71889570 199 TTTTGTATCTACAGAATCCAAAAACTTCTGCAATAGTGAAGGAACTAGTTGCTGAAGGAAATGTGGAAGAACTACAGAAATACTTTGGCTCGCGAATGGAATTTGGCACAGCTGGGCTCAGGGCTGCCATGGGAGCAGGAATTTCTCACATGAATGACTTGACTATTATCCAGACAACTCAGGTATTGTATTCCTCGTA ......x.:.-......:.xxx.....:x.x:::......:x:....:.x..x.....x...:x:..........::....::.....xx.x........:.....x........x...x.:.....:......x.x..........::..............:..:........x..x......:::.:..::.::.. 10M1I188M 147/198 74.2% 199/94230402 0.0% 1/198 0.5% 15489118 NA +6214 chr4 + 190214555 37834609 37834608 37834730 122 TATTTGTAGGGATTTTGCAGATACCTGGAAAAACAATTCAGTGACTTAAAGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCAGAAGGTATTT chr4 - 94230402 22341811 22341810 22341932 71888471 71888470 71888592 122 TGTCTTCAGGGGTTTTGCAGATACCTTGAGAAGAATTTCAGTGACCTGAAAAACAGAGGAGTTGTGATTGGATTTGATGCTCGTGCCCACCTTTCAAGCGGAGGTAGTAGCAAAAGGTACTT .:.:.x:....:..............x..:..:x.x.........:.:..:x.x.:...x:.:.....::.x.....:..:..x..:..:.:x..x..:..:.....:....:......:.. 122M 87/122 71.3% 122/94230402 0.0% 0/122 0.0% 15492798 NA +3091 chr4 + 190214555 37836844 37836843 37836898 55 GATGTATATATGTGTATGGGTGTGTGTGTGTGTGTGTGTATACACACATGCGTAC chr4 - 94230402 25393252 25393251 25393306 68837097 68837096 68837151 55 GATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCAC ...:x.x..:....:...x..:...:...:.x........:.......::..:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 12443592 NA +5820 chr4 + 190214555 37837525 37837524 37837619 95 TCAGGTTTGCCCGACTTGCTGCAACCACATTTATCAGTCAGGGGATTCCTGTGTACCTCTTTTCTGATATAACGCCAACCCCCTTTGTGGTAAGT chr4 - 94230402 22342232 22342231 22342326 71888077 71888076 71888171 95 TTAGGTTTGCAAGACTTGCTGCTAATACGTTCATCAGTCAGGGAGTTCCAGTTTATCTCTTCTCTGATGTAACACCGACACCTTTTGTGGTATGT .:........xx..........x.x:..:..:...........::....x..x..:.....:......:....:..:..x..:.........x.. 95M 75/95 78.9% 95/94230402 0.0% 0/95 0.0% 15495293 NA +5963 chr4 + 190214555 37839842 37839841 37839950 109 TTACAGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGGAATCATGATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTAT----------TTTCCTTTTTCTACT chr4 - 94230402 22343987 22343986 22344105 71886298 71886297 71886416 119 TTGCAGCCATATACGGTAACTCATCTGAAGCTTTGTGCTGGAATTATGGTTACAGCTTCCCATAATCCAAAGCAAGATAATGGTTACAAGGTACTCCTAAATGATCTGTTTTTTCTATT ..:.....x.x:..:...x.x...:....:..............:...:.x..x..x..:..:...........:...........:......:----------.:.x:........:. 94M10I15M 86/109 78.9% 119/94230402 0.0% 10/109 9.2% 15495855 NA +11111 chr4 + 190214555 37840063 37840062 37840265 203 TAGGTCTATTGGGATAATGGAGCTCAGATCATTTCTCCTCACGATAAAGGGATTTCTCAAGCTATTGAAGAAAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAATGACTACTTTGAAGACCTTAAAAAGTACTGTTTCCACAGGTAAAT chr4 - 94230402 22345554 22345553 22345756 71884647 71884646 71884849 203 TAGGTTTACTGGGAAAATGGTGCTCAGATAATTTCCCCTCATGACAAAGGAATTTCTCAGGCTATTGAGGAGAATAAGGAGCCGTGGCCTCAGGCTTGGGATGATAAACAAATTGACAGCAGTGCGCTACTTCATGACCCATATGCTACTATCAATAAGGAATATTTCAAAGACATACAGAAACAGTGCTTTCACAGGTAAGT .....:..:.....x.....x........x.....:.....:..:.....:........:........:..:...xx:..:...........:........:...xxx:x......:......x.:..x..:..::.:..:x:....x.:........x..x..:..::.....x.xx.:..::.x..:..:.........:. 203M 152/203 74.9% 203/94230402 0.0% 0/203 0.0% 15494509 NA +3278 chr4 + 190214555 37840912 37840911 37840976 65 TACATGTATGTGATTCA---TACATATTCATACATGTAAGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406404 4406403 4406471 89823932 89823931 89823999 68 TAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..x.x.:..:.:.:...---...:...x:...xx.:.......................x:....... 17M3I48M 51/65 78.5% 68/94230402 0.0% 3/65 4.6% 33434508 NA +3000 chr4 + 190214555 37840946 37840945 37841023 78 AAGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTTTTTAAAACTTGCTCAAAAGTCTTGAATAGCAAA chr4 - 94230402 89821279 89821278 89821351 4409052 4409051 4409124 73 AAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAA-----TCTCTTTAGCTTTAGACAACAAA ..:.........x.x.....:.:..................::x::.:..-----x...xxx..::..::.:.:.... 50M5D23M 52/73 71.2% 73/94230402 0.0% 5/73 6.8% -51980333 -42250069 +12021 chr4 + 190214555 37844324 37844323 37844557 234 TTCTGCCTTGTATCATTTTCCACTGTGTATCT----GATTCTAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATGGGGTGGGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGTTCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGTGTCTTGGTAA chr4 - 94230402 22346578 22346577 22346815 71883588 71883587 71883825 238 TTCTGCCATACTTAAGTTTTTATTATTAATCTCTTTTGTTTCAGGAATATAAACAAGGAAACAAACCTGAAATTTGTTCATACTTCTGTGCATGGTGTAGGTCATAAATTTGTGCAGCTGGCCTTCAAGGCGTTTGATCTTAGACCTCCTTTTGCTGTTCCGGAGCAGAAGGATCCTGATCCAGAATTTCCCACAGTGAAGTATCCAAATCCTGAAGAAGGCAAAGGTGTTCTGGtaa .......x.::x.x.x...::.:.:.xx....----x:..::....:::.:....:...:.....xx....:.....x..:..:.....x.....x..:.......:x.........:::..:........x.....:...:xx......xxx........x..:.....:.....x.....x..:.....x........:..:..:.....:.....:..x........::...... 32M4I202M 174/234 74.4% 238/94230402 0.0% 4/234 1.7% 15497746 NA +7022 chr4 + 190214555 37845626 37845625 37845762 137 TCTTCAGACTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGGTAAA------ATTAATTGTGATTACCTATATTATAGA chr4 - 94230402 22347477 22347476 22347619 71882784 71882783 71882926 143 TTTTCAGACCTTGTCTTTTGCTTTGGCTGAAAAAGATGGGGCAAAAATCATTTTAGCAAATGATCCAGATGCTGATCGACTTGCAGTGGCAGAGAAACAAGAAAGGTATGGCAGCTAATAAATACAAGCATTTATATTTTGGA .:.......:....................x...:x:::...x.:...::.......x..:..:..:.........x.......x........:..:.....x.....x:------.x...x.:::.x:.::......x.:.. 110M6I27M 103/137 75.2% 143/94230402 0.0% 6/137 4.4% 15498149 NA +17148 chr4 + 190214555 37846909 37846908 37847302 394 TGTTGTTTTTTTTTTCTTTC-AGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTTTTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTTTTCATTTTGAGGTAGGGTGT----TTCTGGGACTCACT--CATTTTCCTTT---CAT--CTGCTCTGTAGAAGATCTAAGGCATGTCTTTCTCTTTTGGATTATCCCTTTAGGAAACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAAAACTGTTTTATTTGCATTTGAAGAAGCTATTGGTAAGAA chr4 - 94230402 22349356 22349355 22349755 71880648 71880647 71881047 400 TATTTTTTTTCTTCTCTCTCCAGTGGTGAATGGAAGGTGTTTTCTGGAAATGAGCTGGGAGCTCTGTTAGGTTGGTGGATCTTCACTTGCTGGAAAAATCAAAATAGGGATGCTTGTGCCATTAAAGATGTCTACATGTTATCAAGCACTGTTTCTTCCAAAATCCTGAGAGCAATTGCACTAAAGGAAGGTTTTCACTTTGAGGTAAGTTGTTAGATTACTGGATATACTTCTATTTGCCTTCCTACATTGCTTTTATTTTTAAAGTCTGTGGGGTTTTGTTGTC------ATTGCTTTTGTAGGAGACACTGACAGGTTTTAAGTGGATGGGGAACCGTGCCAAGCAGCTCATGGATCAGGGAAAAGCTGTTCTTTTTGCATTTGAAGAGGCGATAGGTAAGAA .:..x.....:..:...:..-.............:.........x..x......:....:..:..x:.:..:......x.:..:..x.x:......:.xx.:..:x:....xx:x....:x.:.....:::x........:..x.....:..:..:.........:..x.:..x.....x:................:.........:.x...----..x:x...:x:...--:....x....:---...--..x:.x.x.xx..::...:x..x:.x.:x..x..------...:::::.x.....:...:.:..x..:..............:...x.x.....:.....x..:..:.....:...:.....:.x..............:..x..x........ 20M1I192M4I14M2I11M3I3M2I34M6D114M 285/388 73.5% 400/94230402 0.0% 18/388 4.6% 15497553 NA +10008 chr4 + 190214555 37848493 37848492 37848658 166 AGATGTATGTATGACGTGTG-TTTCTGCAGGATACATGTGCTGCCCTTTTGTTCTGGACAAAGATGGAGTCAGTGCCGCTGTCATAAGTGCAGAGTTGGCTAGCTTCCTAGCAACCAAGAATTTGTCTTTGTCTCAGCAACTAAAGGCCATTTATGTGGAGTAAGTT chr4 - 94230402 22350257 22350256 22350423 71879980 71879979 71880146 167 AAATATAAATATAACTTTTTCTTTGTTTAGGGTATATGTGCTGCCCTGCTGTTCTGGACAAAGATGGTGTCAGTGCTGCTGTTATAACTGCAGAGATGGCTAGCTTTTTGGCAACCAGGAACTTGTCTTTGTCACAGCAGCTGAAGGCCGTCTATGATGAGTGAGTT .:..:..x:...:..x.x.x-...x.x:...:..:............x:..................x........:.....:....x.......x..........::.:.......:...:...........x.....:..:......:.:....xx....:.... 20M1I146M 133/166 80.1% 167/94230402 0.0% 1/166 0.6% 15498236 NA +11760 chr4 + 190214555 37850088 37850087 37850379 292 ATATTTATTTTAGAATACACTGGTTGGTACATGTTCTGTGTCCACCCTACAAAATTATTTGTTCCTCATGTGCATGAATTTGTATTTGTTTGATAGGTATGGCTACCATATTACTAAAGCTTCCTATTTTATCTGCCATGATCAAGAAACCATTAAGAAATTATTTGAAAACCTCAGAAACTACGATGGAAAAAATAATTATCCAAAAGCTTGTGGCAAATTTGAAATTTCTGCCATTAGGGACCTTACAACTGGCTATGATGATAGCCAACCTGATAAAAAAGCTGTAAGT chr4 - 94230402 22352843 22352842 22353127 71877276 71877275 71877560 285 ATTCTTGCTTTATAGAATGTTGTGTGATGTGTGTG--GTGTACAACTAATAAGACTGCTCCTTCTTCA-----ATTGATTGGTATTGTCTTCACAGATATGGATTTCATATTACCAAAGCTTCATATTTCATCTGCCATGATCCTAAAGTGATTCAGCAGCTTTTTGACAACCTTAGGAATTACGATGGAAAAGACACATATCCAAAATCTTGTGGTAGATTTAAAGTTTCTGGAATAAGGGATTTAACTACTGGGTATGACAGCAGCCAGCCAGATCTAAAAGCAGTAAGT ..x:..::....x.:x.:::..xx..:.:::...x--....x..x.:x.:..:.:.::.:x...:...-----..x:...x.....xx:..x.:..:.....x.x:........:........x.....:.............xx:..::x...x..x.::.x.....x.....:..:..:............:.:.xx.........x.......:.:....:..:......xx..x.....::.x..x.....x.....::::.....:..x...xx......x...... 35M2D31M5D219M 200/285 70.2% 285/94230402 0.0% 7/285 2.5% 15497245 NA +10056 chr4 + 190214555 37855574 37855573 37855745 172 TATTTAAATTTATA-ATGTGTGCATTA-----ATTCCTAGGTTCTTCCCACTAGTAAAAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCACCTGGGAACAGGTAT chr4 - 94230402 22353740 22353739 22353917 71876486 71876485 71876663 178 tatatatatatatatatatatatatTCTTACTATTTTCAGATTCTTCCTACAAGTAAAAGTAGCCAAATGATTACATTCACTTTTGCTAATGGAGGAGTGGCCACAATGCGAACCAGTGGAACAGAACCAAAAATCAAATACTATTCGGAACTTTGTGCACCTCCTGGAAACAGGTAT ...x..x..x....-..:.:.::...x-----...:::..:.......:..x........:...........:..x.....:..............x........x.....x........:.....:..x........:......x.:..:..x.....x..x.....:......... 14M1I12M5I146M 140/172 81.4% 178/94230402 0.0% 6/172 3.5% 15501834 NA +7661 chr4 + 190214555 37861450 37861449 37861752 303 ATTTAAACTGTGCTTTGGAA--TAATCCCTTG--ACCTGGATTTTTTTCCCC------CTTATTTTCCAGTGATCCTGAGCAGCTGAAGAAGGAACTGAATGAACTGGTCAGTGCTATTGAAGAACATTTTTTCCAGCCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAG------TCCAGCCTTGGGTATACTTG--CATTTACCTACAATTAAGCTGGGTTTAACTTGTTAAGCAATATTTTTAAGGGCCAAATGATTCAAAAC--------ATCACAGGTATTTATGTGTTTTACAAAGACCTACATTCCTCATTGTT chr4 - 94230402 22354614 22354613 22354939 71875464 71875463 71875789 326 ACTGAAAATGTGCTTTTTAGCTTACTCCACTGTGACATGTTTTCTATTCCATGTGGATTTTGTTTCATAGTGACGTTGAGCAGCTGAAGAAAGAACTGGATGAATTGGTCAGCGCTCTTGAAAAACACTTCTTTCAACCAGAGAAAAACAATCTTCAACGAAAGACTGAGTAAAATAGAACAATTACTACCTTCATTGTATTTGGTATTTTGGCAGCATTAAAAATGCATT--ATTTAAGAAGTAAGGATTTTCAGGACCAAATATCTGAAAACTCAGACTAAAAAAGACTTTTTATGC-TTTTATGAAGATTCATTCTACATACTGTT .:.x...x........xx.:--..x...x:..--..x..xx..:.x....x:------:..:...:x:.....:x:...............:......:.....:.......:...x.....:....:..:..:..:...x....:x.......x..:.x...::.x..x........------.x.x:....x:x.:..:...--xx...:x.x:..x.x..:x..x:..--.:..:xx...:..x:x....x...:......:x:.x.....--------.xx.x::x.x......:-.....::....:::.:x:.x.x:.:.... 20M2I10M2I18M6I120M6I20M2I25M2D41M8I17M1D29M 202/300 67.3% 326/94230402 0.0% 29/300 9.7% 15506836 NA +3044 chr4 + 190214555 37913603 37913602 37913651 49 AAATAAATATATATATATATGTGTGTATATATATATATGTGTGTGTGTG chr4 - 94230402 19704278 19704277 19704326 74526077 74526076 74526125 49 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .....x.......::.....:.x...:...:.x:..:............ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 18209325 NA +3133 chr4 + 190214555 37916316 37916315 37916389 74 TTCTCTCTCTCTGTATGTGTGTGTGTATATATGTGTATATATACATATATATATACATATACTTTAAACATCTT chr4 - 94230402 70982622 70982621 70982695 23247708 23247707 23247781 74 TTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTT ..:..::.x.x...:...:........:......x:...x..:::.:.::...:...:..:x.:x.:x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% -33066306 -61164096 +3015 chr4 + 190214555 37931077 37931076 37931115 39 GGGTTTTTTGGTTTTTGTTGTTTTGTTTGTTTGTTTGTT chr4 - 94230402 13501386 13501385 13501424 80728979 80728978 80729017 39 GGGTTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTT .........x...x......................x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 24429691 NA +3012 chr4 + 190214555 37931081 37931080 37931116 36 TTTTTGGTTTTTGTTGTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 77040879 77040878 77040914 17189489 17189488 17189524 36 TTTTTGATTTTTGTGGTTTTGTTTGTTTGTTTGTTT ......:.......x..................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -39109798 -55120604 +3118 chr4 + 190214555 37933036 37933035 37933092 57 ACTGAGACTCCATTTAAAAACAAAAAAACAAAAAAACAAAAAAAACTTATATTAGAA chr4 - 94230402 78086498 78086497 78086554 16143849 16143848 16143905 57 ACTAAGATTTTACTTAAAAACAAACAAACAAAGAAACAAAAACACCTTCTGGCAAAA ...:...:.::.:...........x.......:.........x.x...x.:x:.:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -40153462 -54076940 +3200 chr4 + 190214555 37942627 37942626 37942696 70 CTCCCAGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGCCCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.::......x.:xx...x.xx.x........::..................x...--......:::. 58M2D10M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 19745488 NA +6304 chr4 + 190214555 37977354 37977353 37977659 306 GCCCGCCGCCGCCGCCGCCGCCGCCGGGGAGAGCGATGCCCCGGCCCCGCCGCTCCCCAAGCCCGCCCCCGGCCGCCCGC--GGGCCCACGGGCCGGCGGCGGGAGTGAGCGGGAG------CCGGCGGGCGAAGAGCC--GCCGCCCGGCCCGCGATGTCACCATTGTTCAGCTGGGTGGCCAAGGTAGGCGGCGTCGGGCGGGCGCCCGTTACCGGAGCGGAGCGGCAGGCGCGGGGCTGGAACATTTGTAACCTTCGGGCCGG-GGCTGGGCCGGGCCGCTGGAGGCCAGGCGCGGCGGGGGGCGAGCGGCGGG chr4 - 94230402 22373944 22373943 22374230 71856173 71856172 71856459 287 GCCCGGCTCTTCCCGCGCCGGCGCCGCCGTGGGCAGCGCTCTGGGCGGGCGGCTCGCGGCGCC-GCTTTCGGAGGGCGGCTGGGGCGCATGAAGGGGAGGCGGCAGGCAGCGGGGGGAGCGGCCGGAGCGCGGGGCGCCTGGCGGCCGGG---AGGATGTCCCCATTGTTCAGCTGGGTCGCCAAGGTAGGCGG---AGGGCACG-GCCCG--GCCAGGG-GGGGCGGCACGCGTCCCGTGGGGA-----------TCCGGGGCGGCAGCGGAGCCCTGCTGCT--------GGCTCGGCTCGGGGCGAGCAGCGAG .....x.x.:x..xx.....x.....xx.x.:..:::..:.:..x.xx..x....x.x:x...-..:::...xx.x.x..--....x..:.::xx..x.....x..xx......:.------....x.x...::.x...--..x...x..---:x......x.................x..............---x....:x.-.....--:..:.:.-..:......x...:xxx.:x..:.-----------.:....x...-:..x.:...xx..:...--------...x....xx.........:...:. 63M1D16M2I34M6I17M2I9M3D41M3D8M1D5M2D7M1D24M11D10M1I17M8D25M 195/276 70.7% 287/94230402 0.0% 41/276 14.9% 15603410 NA +15379 chr4 + 190214555 38014494 38014493 38014981 488 TCTCTCTCTCCT-CAGGTGCCTGAGATCATCAGCTCCATCCGTCAGGCGGGGAAGATCGCCCGGCAGGAGGAGCTGCA---CTGCCCGTCCGAGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCTCTTCTGCGGCCGCGTGACGGTGGCGCACAAGAAGGCTCCGCCGGCCCTGATCGACGAGTGCATCGAGAAGTTCAATCACGTCAGCGGCAGCCGGGGGTCCGA----GAGCCCCCGCCCCAAC---------CCGCC-----------------------------------CCATGCCGC------GCCCACAGGGAGCCAGGAGCCTGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGCCCGGCCTGCGCTCGCTGGCCTTTAGGAAGGAGCTGCAGGATGGGGGCCTCCGAAGCAGCGGCTTCTTCAGCTCCTTCGAGGAGAGCGACATT------------GAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGAAAATCGAACTATGCTCTTCACGGTAAAATA chr4 - 94230402 22395014 22395013 22395571 71834832 71834831 71835389 558 TTTTTTCCTCTTACAGGTGCCTGAGATTATAAGCTCTATTCGACAAGCTGGAAAAATCGCTCGTCAAGAAGAGTTTCAGAATAATCTTTCAGATATTGAAGACCCTTTTGCCAAAAAGTTTGAGGTGCTGTTCTGTGGACGTGTGACTGTAGCACATAAAAATGCACCCCCAGCACTCATAGATGAATGCATTGAGAAATTTAATCATGCGAGTTGTACAAAAAAATCAGATTCCGACTCCTCATCCCAACAACATGAAACTGCCGATAACTCCGGAGGCTTCTCTTTCAGCAACAAATTTCGGGCTGTCTTCCAACCCTTGATGGGTGAAGAGGAGGAGAAAAGGCCAATTAGGAAATCCTTTTCCCAACCTGGACTTCGTTCCTTGGCTTTTAAGAAGGATTTTCAAGAGGGAAGCCATAGGAGTAACAGCTTTGTCAGGTCTTTTGAAGAAGATGCCATTTCACTAAACCTAAAAAGTCAACTTATCTATGGACATAGCGTTGTGCAGCCAACAGACATTGCAGAAAACCGGACAATGTTGTTTACGGTAAAGCA .:.:.::...:.-..............:..x.....:..:..x..:..x..:..:.....:..x..:..:...:.x..---:x::.:x..x..xx.:..x...x.x...x....:.....:........x.....:..x..:.....x..:..:..:..:..x..x..x..:..x..x..x..:..:.....:.....:..:.....:.:x..:x.:.xxx:::::..x..----..x:..:.::......---------.:...-----------------------------------:.:x..:.:------:...x:::x.:.:x.:...xxx.x.x:x.....x..xx.x..:.....:.....:..:..x..x..:..x:....:....:......x:.x..:..x..::...x:x.:..:.:.:....:x....x..:..:..:..::::.x....------------:.:.::..x..:..:x::.....:.:::..........x.....:..:.x:.....:..:..x...:.x..:........::. 12M1I65M3I150M4I16M9I5M35I9M6I148M12I83M 321/488 65.8% 558/94230402 0.0% 70/488 14.3% 15619480 NA +8548 chr4 + 190214555 38018333 38018332 38018550 218 TTTTTTTGTTTGTCTTTTAAGATTGGCCAGTCTGAAGTTTACCTCATCAGTCCTGACACCAAAAAAATAGCATTGGAGAAAAATTTTAAGGAGATATCCTTTTGCTCTCAGGTAAA--TGGAGATGGGTTTTTTTATTCAATTGCAATGGAATTTTTAAATGAATTTCTATAATATCTATCATGTAACAAATGCTAAAGGTTACAAGGTGTATGTTTTCT chr4 - 94230402 22398208 22398207 22398392 71832011 71832010 71832195 185 TTTTTTTTCTTTCTTTTTCAGATTGGCCAGTCTGAAGTTTACCTTATCAGTCCTGACACAAAAAAAGTAGCAATTGAGAAAAGCTTTAAGGAAATATCATTTTGTTCTCAGGTAAGATTGGGCGTGTGTTCTT-------------------TCTTTAAAAGTAAACaaataata----------aataaataataaaGGT------GTGTATATATTCT .......x:..x::....x.........................:..............x......:.....x.x.......::........:.....x.....:..........:--...:x:..x...:..-------------------.:......x.x.xx:xx......----------..:....:x.......------......:.x.... 116M2I15M19D23M10D16M6D13M 148/183 80.9% 185/94230402 0.0% 37/183 20.2% 15620125 NA +7406 chr4 + 190214555 38020585 38020584 38020703 119 TGGCAGGGCATCAGACACGTGGACCACTTTGGGTTTATCTGTCGGGAGTCTTCCGGAGGTGGCGGCTTTCATTTTGTCTGTTACGTGTTTCAGTGCACAAATGAGGCTCTGGTGAGAGA chr4 - 94230402 22405119 22405118 22405237 71825166 71825165 71825284 119 TGATAGGGAATTAGACATGTGGATCACTTTGGATTCATCTGCAGAGAGTCTTCAGAAAATGGAGGCTTCCACTTTGTTTGCTATGTGTTTCAGTGTACAGATGAAGCACTGGTAAGTGA ..::....x..:.....:.....:........:..:.....:x.:........x.:.::...x.....:..:.....:..:..:...........:...:....:..x.....:..x.. 119M 92/119 77.3% 119/94230402 0.0% 0/119 0.0% 15615466 NA +7592 chr4 + 190214555 38020585 38020584 38020724 140 TGGCAGGGCATCAGACACGTGGACCACTTTGGGTTTATCTGTCGGGAGTCTTCCGGAGGTGGCGGCTTTCATTTTGTCTGTTACGTGTTTCAGTGCACAAATGAGGCTCTGGTGAGAGAGGACAAG-------CAATTCTTACCTTG chr4 - 94230402 22401083 22401082 22401229 71829174 71829173 71829320 147 TGATAGGGAATTAGACATGTGGATCACTTTGGATTCATCTGCAGAGAGTCTTCAGAAAATGGAGGCTTCCACTTTGTTTGCTACGTGTTTCAGTGTACAGATGAAGCACTGGTAAGTGAAAGAAAAAAGAGACCTATTCTCATTTTG ..::....x..:.....:.....:........:..:.....:x.:........x.:.::...x.....:..:.....:..:..............:...:....:..x.....:..x..:::x..:-------.x.....:.::... 126M7I14M 105/140 75.0% 147/94230402 0.0% 7/140 5.0% 15619502 NA +9218 chr4 + 190214555 38021542 38021541 38021730 189 AAATTGACTTTTTGGTGACTACAACTTCTCTTCTCTTTGATTAGGTTGATGAAATTATGATGACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGGCTGCCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAGGATAGAGGGTGAG---TAGGGGA chr4 - 94230402 22405614 22405613 22405792 71824611 71824610 71824789 179 AAATTGTTCTTTTG-----------CTCTCTGTTCTTT--TTAGGTTGATGAAATCATGATGACATTGAAACAGGCTTTCACTGTAGCTGCTGTGCAACAAACTTCCAAGGCACAGCCCCAGCTCTGCGAAACGTGTCCTCTGCAAAGCCTGCATAAACTCTGTGAAAAGATAGAAGGTGGGGTTTAAGGGA ......x::.....-----------:.....x:.....--...............:........x:..........:.....x..:..:..x.....:..:..xx.:.....:.x:x.......x..:..::xx..:..:..............:..:........:.:......:....:.---..:.... 14M11D13M2D142M3I7M 138/176 78.4% 179/94230402 0.0% 16/176 9.1% 15615928 NA +9218 chr4 + 190214555 38021542 38021541 38021730 189 AAATTGACTTTTTGGTGACTACAACTTCTCTTCTCTTTGATTAGGTTGATGAAATTATGATGACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGGCTGCCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAGGATAGAGGGTGAG---TAGGGGA chr4 - 94230402 22401579 22401578 22401757 71828646 71828645 71828824 179 AAATTGTTCTTTTG-----------CTCTCTGTTCTTT--TTAGGTTGATGAAATCATGATGACATTGAAACAGGCTTTCACTGTAGCTGCTGTGCAACAAACTTCCAAGGCACAGCCCCAGCTCTGCGAAACGTGTCCTCTGCAAAGCCTGCATAAACTCTGTGAAAAGATAGAAGGTGGGGTTTAAGGGA ......x::.....-----------:.....x:.....--...............:........x:..........:.....x..:..:..x.....:..:..xx.:.....:.x:x.......x..:..::xx..:..:..............:..:........:.:......:....:.---..:.... 14M11D13M2D142M3I7M 138/176 78.4% 179/94230402 0.0% 16/176 9.1% 15619963 NA +7079 chr4 + 190214555 38027756 38027755 38027882 127 TTTTTTCATGCCTCTCTTTTTTCTCTTAATAGGAATGAATTCTTCCAAAACAAAACTAGAACTGCAAAAGCACCTGACGACATTAACCAATCAGGAGCAGGCGACTATTTTTGAAGAGGTTCAGGTA chr4 - 94230402 22407115 22407114 22407241 71823162 71823161 71823288 127 TTTATTTCTGCCAATTTTGTTCCTCTTATTAGGGTTACACCCTTCTAAGACTAAACTAGAACTGCAAAAGCATCTAACAACACTAAATAGCCAGGAGCAGGCTTCTGTTTTTGAAGAGGTTAAGGTA ...x..:x....xx.:..x..:......x....:x.:x.::....:..:..x....................:..:..:...:...x:.::...........xx..:..............x..... 127M 97/127 76.4% 127/94230402 0.0% 0/127 0.0% 15620641 NA +7131 chr4 + 190214555 38027756 38027755 38027891 136 TTTTTTCATGCCTCTCTTTTTTCTCTTAATAGGAATGAATTCTTCCAAAACAAAACTAGAACTGCAAAAGCACCTGACGACATTAACCAATCAGGAGCAGGCGACTATTTTTGAAGAGGTTCAGGTACAGTACAGT chr4 - 94230402 22403093 22403092 22403228 71827175 71827174 71827310 136 TTTATTTCTGCCAATTTTGTTCCTCTTATTAGGGCTACACCCTTCTAAGACTAAACTAGAACTGCAAAAGCATCTAACAACACTAAATAGCCAGGAGCAGGCTTCTGTTTTTGAAGAGGTTAAGGTAAGATTTAGT ...x..:x....xx.:..x..:......x....:x.:x.::....:..:..x....................:..:..:...:...x:.::...........xx..:..............x.....x::.x:... 136M 101/136 74.3% 136/94230402 0.0% 0/136 0.0% 15624663 NA +3028 chr4 + 190214555 38028098 38028097 38028158 61 TGAGCTGCTAAAAAAACAAACAAACAAACAAACAAAAAAAACAGCAAAAAAAAAAATCTCA chr4 - 94230402 88451163 88451162 88451223 5779180 5779179 5779240 61 TGGATTGCCAATTAAAAAAACAAACAAACAAACAAAAAAAACCACTACAAGCAAATACTCA ..:::...:..xx...x.........................x:.x.x..:x...xx.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -50423065 -43807337 +3252 chr4 + 190214555 38028102 38028101 38028180 79 CTGCTAAAAAAACAAACAAACAAACAAACAAAAAAAACAGCAAAAAAAAAA--ATCTCATAATGGTTTTTGTTTGTTTGTT chr4 - 94230402 39346973 39346972 39347053 54883350 54883349 54883430 81 CTGCAAAAAAAGCAAGCAAACAAACAAAAAAAAAACCCAACAAAACAACAGCCACCTCACCATAGAATTTGAATGTGCATT ....x......:...:............x......xx..:.....x..x.:--.:....:x..:.xx....xx...x::.. 51M2I28M 58/79 73.4% 81/94230402 0.0% 2/79 2.5% -1318871 -92911531 +7453 chr4 + 190214555 38035444 38035443 38035701 258 TTTTAGGATCATTGGTGCCCCCTGGTGAGATGATTGAG-TAAAAGCACTAGTTTA-----GTGGATGGAAGCTGTTAGCATTTAAAAA-----------GACGGCTTAGCAATATTGTTGACGATTAAAAATAAATCCTGTTTCTGATTTTTGTT-TTAAAGAAATTGAGACCGAGAAATGAGCAGCGAGAGAATGAATTGATTATTTCTTTTCTGAGATGTTTATATGAAGAGAAACAGAAAGAACACATCCATATTGGGGAGATGAAGCAGGTA chr4 - 94230402 22408502 22408501 22408769 71821634 71821633 71821901 268 TTCTTGGGACACTGCTGTCCCCTGGTG----GATTGAGACAGTAGCACTAATTTAAACTTGTAGTTACA---TTTTGACAGTGAGAAAATGAGAAGGGTGAGATGTTTGCTGTTTGTTTTATGAATGTGTATGACTG-TGCTTGTGGTGTTTTTAATTAAAGAAATTGAGACCAAGAAATGATCAAAAAGAGAATGAGCTGATTATCTCTATTTTGAGAAACATGTATGAAGAAAAACAGAAGAACCATGTTCACATTGGGGAAGCAAAACAAGTA ..:.x..:x..:..x..:.........----.......-:.:x.......:....-----..:.x.:x.---.x..::..x.x.:...-----------..x:xx..x..x:.x.xx..x.:..x.:x:x..:.x.x-..:..x..:.x...x.x-.................:........x..:x:.........::.......:...x..:.....x::x.:........:........::.x..::.:..:........::::..:..:... 27M4D7M1I16M5I9M3D16M11I38M1D17M1I120M 174/250 69.6% 268/94230402 0.0% 26/250 10.4% 15626942 NA +7516 chr4 + 190214555 38035444 38035443 38035701 258 TTTTAGGATCATTGGTGCCCCCTGGTGAGATGATTGAG-TAAAAGCACTAGTTTA-----GTGGATGGAAGCTGTTAGCATTTAAAAAGACGGCTTAGCAATATTGTTGACGATT-----AAAAATA-----AATCCTGTTTCTGATTTTTGTT-TTAAAGAAATTGAGACCGAGAAATGAGCAGCGAGAGAATGAATTGATTATTTCTTTTCTGAGATGTTTATATGAAGAGAAACAGAAAGAACACATCCATATTGGGGAGATGAAGCAGGTA chr4 - 94230402 22404554 22404553 22404821 71825582 71825581 71825849 268 TTCTTGGGACACTGCTGTCCTCTGGTG----GATTGAGACAGCAGCACTAATTTAAACTTGTAGTTACA---TTTTGACAGTGAGAAAATGAGAAGGGTGAGATTTTTGCTGTTTGTTTTATGAATGTGTATGACTGTGCTTGTGGTGTTTTTAATTAAAGAAATTGAGACCAAGAAATGATCAAAAAGAGAATGAGCTGATTATCTCTATTTTGAGAAACATGTATGAAGAAAAACAGAAGAACCATGTTCACATTGGGGAAGCAAAACAAGTA ..:.x..:x..:..x..:..:......----.......-:.:x.......:....-----..:.x.:x.---.x..::..x.x.:...:xx:.xxx:.::.x...x...x:.x..-----.x:...:-----:.::x..:..x..:.x...x.x-.................:........x..:x:.........::.......:...x..:.....x::x.:........:........::.x..::.:..:........::::..:..:... 27M4D7M1I16M5I9M3D43M5I7M5I22M1I120M 172/251 68.5% 268/94230402 0.0% 24/251 9.6% 15630890 NA +6720 chr4 + 190214555 38044339 38044338 38044497 159 CTTTTCGTTTTTCACTTTTTT--------------AGACATCGCAGATGGCAGCAGAGAATATTGGAAGTGAATTACCACCCAGTGCCACTCGATTTAGGCTAGATATGCTGAAAAACAAAGCAAAGAGATCTTTAACAGAGTCTTTAGAAAGTATTTTGTCCCGGGTAAGTA chr4 - 94230402 22411278 22411277 22411450 71818953 71818952 71819125 173 CTTTGCGTTTCACATTTATGTTTATAAACACCTACAGACTTCACAACCGTCTGCTGAGAATGCTGTAAATGAGGTGCCCAGCAGTGCTCCAAGATTCAGATTAGATATGTTAAAGAACAAGGCAAAAAGATCTCTGACGGAATCGTTTGAAAGTATTTTATCACGTGTAAGTA ....x.....:x..:..x.x.--------------....x..:..:x:.x.x..x......::..x..:...:x.:..xxx......:x.xx....:..::........:.:..:.....:.....:......:.:..:..:..x..x...........:..x..x....... 21M14I138M 114/159 71.7% 173/94230402 0.0% 14/159 8.8% 15633061 NA +6925 chr4 + 190214555 38044339 38044338 38044497 159 CTTTTCGTTTTTCACTT--------------TTTTAGACATCGCAGATGGCAGCAGAGAATATTGGAAGTGAATTACCACCCAGTGCCACTCGATTTAGGCTAGATATGCTGAAAAACAAAGCAAAGAGATCTTTAACAGAGTCTTTAGAAAGTATTTTGTCCCGGGTAAGTA chr4 - 94230402 22413855 22413854 22414027 71816376 71816375 71816548 173 CTTTGCGTTTCACATTTATGTTTATAAACACTTACAGACTTCACAACCGTCTGCTGAGAATGCTGTAAATGAAGTGCCCAGCAGTGCTCCAAGATTCAGATTAGATATGTTAAAGAACAAGGCAAAAAGATCTCTGACGGAATCGTTTGAAAGTATTTTATCACGTGTAAGTA ....x.....:x..:..--------------..x:....x..:..:x:.x.x..x......::..x..:....x.:..xxx......:x.xx....:..::........:.:..:.....:.....:......:.:..:..:..x..x...........:..x..x....... 17M14I142M 115/159 72.3% 173/94230402 0.0% 14/159 8.8% 15630484 NA +10584 chr4 + 190214555 38049611 38049610 38050000 390 CTCCCAGGAGCCATCTGTGTGTGAAAAGGAGGC----------CTTGCCCATCT--CTGAGAGCTCCTTTAAGCTCCTCGGCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGGAACCTCCACAACCTGCCCGGGGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGGTATCACTCAGTGAGCACAGAGACGCCTCATGAACGAAAGTAAGATTTGTTTAA----------------ATTTGTTGCATAAATAGCTGGGGCATATCTGTGACTAGCCAGGTATGTGCATCCCAGGTATGTTTATTGAGTGA--GAGAAATGAGTCA chr4 - 94230402 22417224 22417223 22417626 71812777 71812776 71813179 403 CTCCTAGGAGCAACCACTGTCTGAAAGGGAGACAGACAGAGTTCCTACACTTCCTCCAGAGAATGCTGTCAAGAGCAGTGGATCAGTGGATGATCTTTCCAGTGACCCAGATAGTTATGCTATTGATCATTCTGTTACATTA---CCTCAACAAAGCTTTCGAAGGCGAGCAAACACACTGAGTCATTTACCATCAGAAAGCCGGGAATCCCTGGTACCTGTTGAAACATCACCATCTGTTCCCCAGAGGAAACTTATGAGGTATCACTCAGTGAGCACAGAAACTCCTCACAAGAGAAAGTAAGACTTACTGAAAGCAGGCTGTGCTTTCATTTGTTG-----------AGGGCATGTTCGGGATGAT---GATGATTACATACCAGATATGTCCTCCTAGTGGATAAGAAATGTATCA ....:......x.:.xx...x.....:....:.----------.:.:.x.x..:--.x....::x.:x.:...xx.xx:..x..xx:...x..:..x.........:.:..x...:..x::x:x..xx.x:.x.:.x.::.:---..:..:..::x...:x.:..............x........:..x..xx:x...x...:....:.:.::xx.....::x:::x:..x..:xxx...:.x..:...................................:..x.....::.:x..........:..::.x..----------------........-----------:......:.::.x..:x.x---.:.:xx.:...x....:.....::x::x....:--:.......x:... 33M10I11M2I86M3D170M16I8M11D19M3D33M2I13M 247/373 66.2% 403/94230402 0.0% 47/373 12.6% 15632387 NA +8239 chr4 + 190214555 38051910 38051909 38052065 156 CACCTGTGGGTGAGTCTAAGCACCGCCCAGGTCAGTCTTCAGCTCCTGCTCCTCCACCTCGTCTTAACCCCTCCGCCTCCTCGCCAAACTTTTTTAAGTACCTAAAACATAATTCCAGTGGAGAACAAAGTGGGAATGCTGTGCCAAAGAGGTGAG chr4 - 94230402 22418974 22418973 22419129 71811274 71811273 71811429 156 CATCTGTCGGCGAACCTAAAAGTTCTTCTGGTCAACTTGCACGTTCTCCTACTCTAGCTCGTCTTAATCCCTCGGCCTCTTCACCCAACTTTTTTAAATATCTAAGGCATAATTCAAGTGGAGAACAAAGTGGGCATTTTGCACAAAAGAGGTGAG ..:....x..:..::....:x:::x::.x.....:::.x..xx.:..x..x...:.x..........:.....x.....:..:..x...........:..:....::........x..................x..x:..::.x........... 156M 115/156 73.7% 156/94230402 0.0% 0/156 0.0% 15632936 NA +12718 chr4 + 190214555 38053032 38053031 38053234 203 TTTGAAGCTTA----TAT------TTTATACTTTGTGTTTTTATGTTTCTTTATCCTAAACT---CTTTTTTCAACCAAACTCTTAGCATCTCCTACCGTAATGCCCTGCGGAAAAAACTTCATTCTTCTTCCTCTGTGCCAAATTTTCTAAAATTTCTGGCTCCTGTAGATGAAAATAACACCTCTGATTTTATGAACACAAAAAGGTAGGGCTT chr4 - 94230402 22433027 22433026 22433242 71797161 71797160 71797376 216 TTTGAAACTTAGCAGTATAAGGGATTTTTATTCTGTGGATTTATACTTCCTTGTTCTAAACTATACTTTTCCCAACTGCACTCTCAGCATCTCCTACCGTACTGCCTTAAGGAAAAAGCTTCATTCTTCCTCTTCTGTGCCAAATTTCTTAAAATTTCTGGCTCCTGTAGATGAAAATAACACCTCAGACTTTAGGAGCACAACAAGGTAGGGTTT ......:....----...------...x..:.:....xx.....::...:..:.:.......---.....::....::x.....:................x....:.:x.......:...........:..:..............::.....................................x..:....x..:.....x.........:.. 11M4I3M6I38M3I151M 171/203 84.2% 216/94230402 0.0% 13/203 6.4% 15620005 NA +12781 chr4 + 190214555 38053032 38053031 38053234 203 TTTGAAGCTTA-----------TATTTTATACTTTGTGTTTTTATGTTTCTTTATCCTAAACT---CTTTTTTCAACCAAACTCTTAGCATCTCCTACCGTAATGCCCTGCGGAAAAAACTTCATTCTTCTTCCTCTGTGCCAAATTTTCTAAAATTTCTGGCTCCTGTAGATGAAAATAACACCTCTGATTTTATGAACACAAAAAGGTAGGGCTT chr4 - 94230402 22421280 22421279 22421495 71808908 71808907 71809123 216 TTTGAAACTTAGCAGTATGTGTTATTTT-TATTCTGTGGATTTATACTTCCTTGTTCTAAACTATACTTTTCCCAACTGCACTCTCAGCATCTCCTACCGTACTGCCTTAAGGAAAAAGCTTCATTCTTCCTCTTCTGTGCCAAATTTCTTAAAATTTCTGGCTCCTGTAGATGAAAATAACACCTCAGACTTTAGGAGCACAACAAGGTAGGGTTT ......:....-----------......-..:.:....xx.....::...:..:.:.......---.....::....::x.....:................x....:.:x.......:...........:..:..............::.....................................x..:....x..:.....x.........:.. 11M11I6M1D34M3I151M 171/202 84.7% 216/94230402 0.0% 15/202 7.4% 15631752 NA +4285 chr4 + 190214555 38054167 38054166 38054284 118 CTAGTCATAAATCAATC---ATCTTATAATTTTAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATAT chr4 - 94230402 22434359 22434358 22434479 71795924 71795923 71796044 121 CTACTCACAAGGCATCCTGTGTTCTGCAATTTTAGTGACTACGAATCCAAACACAGCCAGCAGGCTGCTGGTGCTGACAGCCCTGTAAGGACACGGCGACATTCTTGGAGACAGCAGATAT ...x...:..:x..x:.---:.::.::........x....x:.........xxx.:...x.xx.x..x.xx..x..:x.x:.....:.:...x...x.:.....:.....:.......... 17M3I101M 81/118 68.6% 121/94230402 0.0% 3/118 2.5% 15619808 NA +7957 chr4 + 190214555 38054167 38054166 38054347 181 CTAGTCATAAATCAATC---ATCTTATAATTTTAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTCTTCCAGCAGATATGAAGGTAAGGCCG chr4 - 94230402 22422581 22422580 22422764 71807639 71807638 71807822 184 CTACTCACAAGGCATCCTGTGTTCTGCAATTTTAGTGACTACGAATCCAAACACAGCCAGCAGGCTGCTGGTGCTGACAGCCCTGTAAGGACTCGACGACATTCTTGGAGACAGCAGATATTCCTGCGAGTGGCCACTCCTCAGAAAGCATGTGATTCTCCCAGTCGGTACGATGGTAAGTCTG ...x...:..:x..x:.---:.::.::........x....x:.........xxx.:...x.xx.x..x.xx..x..:x.x:.....:.:...:..:x.:.....:.....:..............x.....:.....:..x.....:..:..:......:....:x.:..:..x......x.:. 17M3I164M 128/181 70.7% 184/94230402 0.0% 3/181 1.7% 15631586 NA +3156 chr4 + 190214555 38063717 38063716 38063782 66 CTCCTGGGTTCAAGTGATTCTCATGCCTCAGCGACCTGAGTAGCTGGGATTACAGGCATGCCCCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.............x...x..x.x......xx::::.........:.:....--.:...x.... 54M2D10M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 19866578 NA +12947 chr4 + 190214555 38089782 38089781 38090123 342 TATGCCAATGCATATTAACACAGGAATTTTAAATTTGGTGATATTATTATATTTTATCTGAATGAACAGAATTTGCTGATTTGACACTGTGTTTGAATGTGCATTTTTTGTTGAAAAATGACAATTCTGGAATGCCGTCTCCCTTTCCAGATTATTCAGAGCTGGGAGAGCTTCCCCCACGATCTCCTTTAGAACCAGTTTGTGAAGATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAAAGGACATCTCGTGAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTTAGAATGGAGAAGGAAAATCAGAAGCTCCAAGGTTGGT chr4 - 94230402 22443607 22443606 22443933 71786470 71786469 71786796 327 tatgcgtatacatatacacacacgagtgta----tgcgtgatatgtatatat---aaatatatatacaATCTTTAGAGATGTGTCCCTTTGTT--------CACCCATTCATGAAGTCTAAGTAGTTCATAACAACTTCTCTCTTTCAAGATTACACTGAGCTGGGAGAACTTCCACCCAGATCTCCTTTGGAACCAGTGTGTGAAGATGGCCCCTTTGGTCCAGTGAAGGAAGAAAGAAAACGGACATCCCGTGAGCTTCGCGAATTGTGGAAGAAAGCCATTATTCAGCAAATACTGCTCCTCAGAATGGAGAAAGAAAACCAGAAGTTACAAGGTTGGT .....xx..:.....xx.....x..:.x.x----.xx.......xxx.....---.xx.:x..:x...:xx...:xx...x..x.x..x....--------..:::x..xx....:xx.:.xx.x.:::x..::x.x....:.....x......:x.x...........:.....x..xx..........:........x...........x........:..xx::xx:..:....::...x.......:........:..x..::.....x.:..:..:...x....:..:........x..:...........:.....:......:.x.......... 30M4D18M3D38M8D241M 234/327 71.6% 327/94230402 0.0% 15/327 4.6% 15646175 NA +12947 chr4 + 190214555 38089782 38089781 38090123 342 TATGCCAATGCATATTAACACAGGAATTTTAAATTTGGTGATATTATTATATTTTATCTGAATGAACAGAATTTGCTGATTTGACACTGTGTTTGAATGTGCATTTTTTGTTGAAAAATGACAATTCTGGAATGCCGTCTCCCTTTCCAGATTATTCAGAGCTGGGAGAGCTTCCCCCACGATCTCCTTTAGAACCAGTTTGTGAAGATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAAAGGACATCTCGTGAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTTAGAATGGAGAAGGAAAATCAGAAGCTCCAAGGTTGGT chr4 - 94230402 22431181 22431180 22431507 71798896 71798895 71799222 327 tatgcgtatacatatacacacacgagtgta----tgcgtgatatgtatatat---aaatatatatacaATCTTTAGAGATGTGTCCCTTTGTT--------CACCCATTCATGAAGTCTAAGTAGTTCATAACAACTTCTCTCTTTCAAGATTACACTGAGCTGGGAGAACTTCCACCCAGATCTCCTTTGGAACCAGTGTGTGAAGATGGCCCCTTTGGTCCAGTGAAGGAAGAAAGAAAACGGACATCCCGTGAGCTTCGCGAATTGTGGAAGAAAGCCATTATTCAGCAAATACTGCTCCTCAGAATGGAGAAAGAAAACCAGAAGTTACAAGGTTGGT .....xx..:.....xx.....x..:.x.x----.xx.......xxx.....---.xx.:x..:x...:xx...:xx...x..x.x..x....--------..:::x..xx....:xx.:.xx.x.:::x..::x.x....:.....x......:x.x...........:.....x..xx..........:........x...........x........:..xx::xx:..:....::...x.......:........:..x..::.....x.:..:..:...x....:..:........x..:...........:.....:......:.x.......... 30M4D18M3D38M8D241M 234/327 71.6% 327/94230402 0.0% 15/327 4.6% 15658601 NA +11520 chr4 + 190214555 38095896 38095895 38096096 201 TTTACTAATGCGCTCTGGAATGGTCTATTCCAGCCTCTGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGATTATGAAGAAATTACTCCCTGTCTTAAAGAAGTAACTACAGTGTGGGAAAAGATGCTTAGCACTCCAGGAAGATCAAAAATTAAGTTTGACATGGAAAAAATGCACTCGGCTGTTGGGCAAGGTAAGC chr4 - 94230402 22448474 22448473 22448673 71781730 71781729 71781929 200 TTAATTGGTGCACT-TATGATATTGTTTTCCAGCCTCAGAAAATAATTTGCAGAACAGACGTCTGAAGCTTGACTATGAAGAAATCACACCGTGCTTGAAAGAGGTAACTCTGATTTGGGAAAAAATGTTGAGTACACCTGGAAGGTCAAAGATTAAATTTGACATGGAAAAAATACATTCTGCTGTTGGGCAAGGTAAGC ..x.:.::...:..-.:x:..:x.x.x..........x......:......x.....::..:........:..:...........:..x..x..::.x.....:......x:::.x........:...:.x..:..x..x.....:.....:.....:.................:..:..x................... 14M1D186M 156/200 78.0% 200/94230402 0.0% 1/200 0.5% 15647422 NA +11520 chr4 + 190214555 38095896 38095895 38096096 201 TTTACTAATGCGCTCTGGAATGGTCTATTCCAGCCTCTGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGATTATGAAGAAATTACTCCCTGTCTTAAAGAAGTAACTACAGTGTGGGAAAAGATGCTTAGCACTCCAGGAAGATCAAAAATTAAGTTTGACATGGAAAAAATGCACTCGGCTGTTGGGCAAGGTAAGC chr4 - 94230402 22445859 22445858 22446058 71784345 71784344 71784544 200 TTAATTGGTGCACT-TATGATATTGTTTTCCAGCCTCAGAAAATAATTTGCAGAACAGACGTCTGAAGCTTGACTATGAAGAAATCACACCGTGCTTGAAAGAGGTAACTCTGATTTGGGAAAAAATGTTGAGTACACCTGGAAGGTCAAAGATTAAATTTGACATGGAAAAAATACATTCTGCTGTTGGGCAAGGTAAGC ..x.:.::...:..-.:x:..:x.x.x..........x......:......x.....::..:........:..:...........:..x..x..::.x.....:......x:::.x........:...:.x..:..x..x.....:.....:.....:.................:..:..x................... 14M1D186M 156/200 78.0% 200/94230402 0.0% 1/200 0.5% 15650037 NA +10821 chr4 + 190214555 38102971 38102970 38103163 193 ATTTCCATGTCTTCTCTCCCTTTTAAAGGTGTGCCACGTCATCACCGAGGTGAAATCTGGAAATTTCTAGCTGAGCAATTCCACCTTAAACACCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGACCTTGGTAAGT chr4 - 94230402 22450024 22450023 22450210 71780193 71780192 71780379 187 ACTTTAATGACCTTCTTCTC------AGGAGTACCACGTCACCACCGTGGGGAGATCTGGAAGTTTCTAGCAGAGCAATATCATCTTAAACATCAGTTTCCAAATAAACAACAACCAAAGGACACACCTTATAAAGAACTCCTTAAACAACTAACTTCCCAGCAACATGCAATACTTATCGACCTGGGTAAGT .:..:x...x.:.:::..:.------...x..:........:.....x..x..:........:........x.......x:..:........:........x.::.....:..:........::::..x..:.........:.x..:..:..:...........:.....:..x.....:.....x....... 20M6D167M 145/187 77.5% 187/94230402 0.0% 6/187 3.2% 15652947 NA +17874 chr4 + 190214555 38115662 38115661 38115988 327 TTCTTTTTTTGTTTTTATTATTACAACTAAT------ATGTATTCTT-------TTCACAGGGCGAACCTTTCCTACACACCCATACTTCTCTGCCCAGCTTGGAGCAGGACAGCTATCGCTTTACAACATTTTGAAGGCCTACTCACTTCTAGACCAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGAGGCGTTTAAAATGCTCAAGTTTCTGATGTTTGACATGGGGCTGCGGAAACAGTATCGGCCAGACATGATTATTTTACAGGTATAGAGTGTTCCTTATGTCTTTAATACAACAA chr4 - 94230402 22454323 22454322 22454657 71775746 71775745 71776080 335 TTGTTTTTCTGTTGTTGTTGTTGTTTTCCATTTTTTAACGTATCCTTAACTGTGTTCACAGGACGCACATTTCCAACACATCCGTACTTCTCAGCACAGCTGGGAGCTGGGCAGCTGTCACTCTACAATATTTTGAAGGCCTATTCCCTTCTGGACCAGGAAGTAGGATATTGCCAGGGACTTAGTTTTGTAGCAGGAGTTCTACTACTTCATATGAGTGAAGAAGATGCTTTTAAAATGCTGAAGTTTCTCATGTTCGATGTGGGGCTAAGAAAACAGTATCGTCCTGACATGACAATTCTACAGGTATAA-----TTTCCATTTTTCTAACACAAGAA ..x.....:....x..:..:..::xx::x..------.:....:...-------........:..x..x.....x.....:..:........x..x.....x.....x..:.....:..:..:.....:..............:..x.....:...........:...........:..x..:..:...........x:..:.:..x..............:.....x..x...........x........x.....:..::.......:x.:...........x..x.......:x...:..........:-----.::::..x.:.:...:....x.. 31M6I10M7I258M5D23M 254/322 78.9% 335/94230402 0.0% 18/322 5.6% 15661339 NA +12380 chr4 + 190214555 38118022 38118021 38118207 186 TCTTCCTGCAGATCCAGATGTACCAGCTCTCGAGGTTGCTTCATGATTACCACAGAGACCTCTACAATCACCTGGAGGAGCACGAGATCGGCCCCAGCCTCTACGCTGCCCCCTGGTTCCTCACCATGTTTGCCTCACAGTTCCCGCTGGGATTCGTAGCCAGAGTCTTTGGTGAGCATTAGTAAA chr4 - 94230402 22455045 22455044 22455230 71775173 71775172 71775358 186 TCTTCATGCAGATCCAGATGTATCAACTGTCCCGACTTCTTCATGACTACCATCGAGACCTCTATAACCACCTTGAGGAACATGAGATTGGCCCCAGCCTCTATGCTGCTCCCTGGTTTCTCACCATGTTTGCCTCACAGTTTCCCCTGGGATTTGTCGCAAGAGTATTTGGTAATTCTTCATAAA .....x................:..:..x..xx.::.x........:.....:x..........:..:.....x.....:..:.....:..............:.....:........:.......................:..x........:..x..x.....x......:.x:x..x:.... 186M 153/186 82.3% 186/94230402 0.0% 0/186 0.0% 15662977 NA +14266 chr4 + 190214555 38124914 38124913 38125204 291 GTGAGAAACTGGTCTGGTTTA---ACTTTCTGCATTTCTGTGTTTTCTCAGATATGATTTTTCTTCAGGGAACAGAGGTCATATTTAAAGTGGCTTTAAGTCTGTTGGGAAGCCATAAGCCCTTGATTCTGCAGCATGAAAACCTAGAAACCATAGTTGACTTTATAAAAAGCACGCTACCCAACCTTGGCTTGGTACAGATGGAAAAGACCATCAATCAGGTATGAGTCAGTCCAAACCTTGCAAATGCTTAAGCCATCCTAGATATGTAGAAACTTAAATCTCTCTTGAGCA chr4 - 94230402 22459819 22459818 22460096 71770307 71770306 71770584 278 GTCAAAAGATGGGCTTACTTATGTGCTCTATTTTTTCCTTTGTTTTCACAGATATGCTTTTCCTTCAAGGATCAGAGGCTATATTTAAAGTGGCCTTAAGCCTTTTGGGAAGCCACAAGCCCTTGATTCTGCAGCATGAGAACCTAGAAACTATTGTTGATTTTATTAAAAACACGCTCCCCAACTTGGGTTTGGTACAGATGGAAAAGACAATTAGTCAGGTATGAA-------AGAACTTG--AATGTATGAGT-------AATATGCAAAGAAATAATATTCTTTTTAACA ..x.:..:x...x..x::...---:..:.x.x:x..:..x.......x........x....:.....:...x......::..............:.....:..x...........:.......................:...........:..x.....:.....x....:......x......:.x..:....................x..:.:..........:-------.:.x....--....:x.:..:-------:.....:.:.:.xx...xx:...:..x.:.. 21M3I204M7D8M2D11M7D31M 216/275 78.5% 278/94230402 0.0% 19/275 6.9% 15665095 NA +12155 chr4 + 190214555 38133053 38133052 38133273 221 TAGTACGTGATGACTTTTCTTTCTATAACAGGTATTTGAAATGGACATCGCTAAACAGTTACAAGCTTATGAAGTTGAGTACCACGTCCTTCAAGAAGAACTTATCGATTCCTCTCCTCTCAGTGACAACCAAAGAATGGATAAATTAGAGAAAACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGTTGCAGGTAGAG--CATATTTATA chr4 - 94230402 22462292 22462291 22462511 71767892 71767891 71768111 220 TAGCACTTAATTATGTTTTCATATACAACAGGTGTTTGAAATGGATATTGCCAAGCAGCTGCAAGCTTATGAAGTTGAATACCATGTGCTTCAGGATGAGCTTATAGATTCAT---CTTTGAATGACAATCAGAGACTGGATAAGTTAGAAAAGGCAAACAGTAGCTTGCGCAAACAGAACTTTGAACTCCTGGAAGAACTGCAGGTACAGTTTATATTCATA ...:..x.:..x.:x...::x.x..:.......:...........:..:..:..:...:.:.................:.....:..x.....:..x..:.....x.....x.---..:.x.:......:..:...x.......:.....:..::.x.....:.....:............:....x.....x...x.::........x..--:.....:... 113M3D95M2I10M 170/218 78.0% 220/94230402 0.0% 5/218 2.3% 15670761 NA +3577 chr4 + 190214555 38135790 38135789 38135924 135 GGCACAAGTGTTGTCACATTCAAAA------AAGTATTTTCTTTGTTTGAAAAATGAAAAATATATATATATGTGTGTGTGTATATA--TATGTGTGTGTGTGTGTATATATGTGTGTGTGTAT--ATATACGTGTGTGTGTATA chr4 - 94230402 81401229 81401228 81401373 12829030 12829029 12829174 145 GGCAAATATTTTGGAAAGTTTAAAATGCTTCAAATATTTCTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x:.x...xx.x:..:....------..:.....::.:x.:.x....x:x.:....x.x....x.x.....x.....x..x.--...:.:::.:x.x..::..:..x............--..:.x.:.:..x:....:. 25M6I56M2I35M2I19M 90/135 66.7% 145/94230402 0.0% 10/135 7.4% -43265439 -50964963 +3491 chr4 + 190214555 38135822 38135821 38135907 86 TTCTTTGTTTGAAAAATGAAAAATATATATATATGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATGTGTGTGTGTATAT chr4 - 94230402 39267116 39267115 39267201 54963202 54963201 54963287 86 TTCCATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTAT ...:x...x..x...:x:.:..x.x::....x........:..x::::.::..xx................x.....::.x.:... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% -1131294 -93099108 +3049 chr4 + 190214555 38135844 38135843 38135910 67 ATATATATATATGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATGTGTGTGTGTATATATA chr4 - 94230402 19704284 19704283 19704350 74526053 74526052 74526119 67 ATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA .......::...:.:.x.......:.x:...............x..x.xx....x.x.xx..x..:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 18431560 NA +3103 chr4 + 190214555 38135867 38135866 38135926 60 TATATATGTGTGTGTGTGTGTATATATGTGTGTGTGTATATATACGTGTGTGTGTATATG chr4 - 94230402 39267143 39267142 39267202 54963201 54963200 54963260 60 TATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATG ....x........:..x.:.:.::.:xx.........:......x.....::.x.:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -1131276 -93099126 +6939 chr4 + 190214555 38137104 38137103 38137346 243 TTGTATTCTCATTTCTTCTTTTATTCTCC------------AGGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTTAGAACTGGAGCGGTCGGCCCTGCTGCAGACGGTGGAGGAGCTGCGGCGGCGGAGCGCAGAGCCCAGCGACCGGGAGCCTGAGTGCACGCAGCCCGAGCCCACGGGCGACTGACAGCTCTGCAG chr4 - 94230402 22464366 22464365 22464616 71765787 71765786 71766037 251 ttttctttttttttctttttttCCTCCCCTCTTTCTGTGAAAGGTGGCTAATGGAAAGATCCAAAACCTTGAAGCCACAGTAGAGCTTTTATTGACTAATGAAGGCAAATTGAAGGAGTCAATTCTCACTCTTGAGCAGGAACGAACAGCTTTGCAGAAGGCAGTGGAAGAGATGCGAAGAAAGATTGGTGATACAAACGA---GAAGCCTCTGCTTACTAGACAAGAGCACCTGGATG-CTGACTGATCTGCAG ..x.x..:.:x......:....x:..:..------------.......x.....x.:........:......:.....x:.x...xxx:.x:...x:.:...::....::.....x..x.x..x..:..::.x..:.x...:..:x.:..::...x.x..:.:.....:...x....:x.:x:..x:.xx..xx.x.:...---.:.....xx.:x:..xx::.xx....x.x:..::.-.....x.x....... 29M12I160M3D35M1D15M 155/239 64.9% 251/94230402 0.0% 16/239 6.7% 15672738 NA +3107 chr4 + 190214555 38171711 38171710 38171788 78 AGCCTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAA----------GGCAAGGGAGAAAGGCAGATGGAGAC-CAAAATTT chr4 - 94230402 79828828 79828827 79828916 14401487 14401486 14401575 89 AGCTCTCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAAGTGGATTATGGCTACAGATGAAGAAAGATGAACTCACAAAATTT ...:::.............:.....:......::.:::......----------...x.x:..x:...:x.....:.xx.-........ 44M10I26M1I8M 58/78 74.4% 89/94230402 0.0% 11/78 14.1% -41657117 -52573285 +3277 chr4 + 190214555 38171725 38171724 38171783 59 AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGGCAAGGGAGAAAGGCAGATGGAGACCAA chr4 - 94230402 44177696 44177695 44177754 50052649 50052648 50052707 59 AAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGATGATCAA ...............:......:.x.....x.....:.::::..:x:....:x..:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -6005971 -88224431 +3091 chr4 + 190214555 38204039 38204038 38204139 101 AAAAAAACAAAAAACAAAACAAAACAAAACAAAAACCAAACTCTAGAGAAA--------AAGCCACC-------ATCTCTGTGGCTGGGCTAATGAATCAGGCTGGACACTAGAAC chr4 - 94230402 63770298 63770297 63770413 30459990 30459989 30460105 116 AAAAAAACAAAAAACAAAACACAAAACAACAACAAACAGACTCGAGAAACATTTGTAATAAGTGACTTTTAAAGATCGCTTTAATTGCGCTACGGAGGCAATGCAGATATTAAAAC .....................x..x.x.....x..x..:....x...:.x.--------...:x..:-------...x..x.:::..x....xx..:x..:xx::..:.:..:... 51M8I8M7I42M 71/101 70.3% 116/94230402 0.0% 15/101 14.9% -25566259 -68664143 +3140 chr4 + 190214555 38204039 38204038 38204079 41 AAAAAAACAAAAAACAAAACAAAACAAAACAAAAACCAAAC chr4 - 94230402 21291815 21291814 21291855 72938548 72938547 72938588 41 AAAAAAACAAAAAACAAAACAAAACAAAAAAACAACCGAGC .............................x..x....:.:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 16912224 NA +3019 chr4 + 190214555 38226566 38226565 38226605 40 CTTTTTGCTGCTTTTTGTTTGTTTGTTTGTTTTGTTTTTG chr4 - 94230402 71759030 71759029 71759069 22471334 22471333 22471373 40 CTTTTTACTGTTTTTTGTTTGTTTGTTTGTTTTACTGTTG ......:...:......................::.x... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% -33532464 -60697938 +3301 chr4 + 190214555 38234358 38234357 38234443 86 CTGTGCGACCTTGGGCAGGCCACTGCACCTGCACCTCTCTCAGACTCAGTTTCCTTGACTGTAAACTGGGAAGAATGAGAATATTT chr4 - 94230402 340735 340734 340812 93889591 93889590 93889668 78 CTGTTGGACATTTGACAG--------ATCCTCTCCTTTCTCTGCCTCAGTTTCCTGAACTGTGAACTGGGAATGATGAAATCATTT ....xx...x..x.:...--------.:.:x.x...:....x.x...........x:.....:.........x:....:.x:.... 18M8D60M 58/78 74.4% 78/94230402 0.0% 8/78 10.3% 37893623 NA +3514 chr4 + 190214555 38264861 38264860 38264927 67 CAAGAAAAGGAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGGTGGTGGTGGTGGTGGTGGTGG chr4 - 94230402 92738612 92738611 92738678 1491725 1491724 1491791 67 CAAAAGAGGGGAAATAAAAGAAATGAAGGGACAGAAAAGAAGAGGGAGGCGGTGGTGGTGGTGGTGG ...:.:.:..::..x..:.::..x:..::..x::.:.......:..x..:................. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% -54473751 -39756651 +3165 chr4 + 190214555 38264866 38264865 38264930 65 AAAGGAGAAGAAGAAGAAGAAAAAGAAGAAGA-AGAAGAAGGTGGTGGTGGTGGTGGTGGTGGTGG chr4 - 94230402 92738613 92738612 92738678 1491725 1491724 1491790 66 AAAAGAGGGGAAATAAAAGAAATGAAGGGACAGAAAAGAAGAGGGAGGCGGTGGTGGTGGTGGTGG ...:...::...:x.:......x::.:.:.x.-.:......:x..x..:................. 32M1I33M 48/65 73.8% 66/94230402 0.0% 1/65 1.5% -54473747 -39756655 +3414 chr4 + 190214555 38332132 38332131 38332213 82 CTGCAACCTCTGCCTCCTGGGTACAAGTGATTCTCCTGCCTCAGCCTCTCAAGAAGCTGGGATTACAGGCATGTGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:..:..:xx:x..:......x......x...x.xx.x........:.....x......:.:....--.:..::....::. 67M2D13M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 20135006 NA +3038 chr4 + 190214555 38338059 38338058 38338118 60 CTCCAAAAAAAAAAAAAAAACCCAGACAACAACAACAAAAACAAAACAAACAAAACTTCC chr4 - 94230402 16619853 16619852 16619912 77610491 77610490 77610550 60 CTCAAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCTGTAGAGTTTCC ...x..x:.......x....xx..:................x.....xx::.:.::.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 21718206 NA +3125 chr4 + 190214555 38345139 38345138 38345182 44 GGAAAGAAGACAGGAAGGGAGAAAGGGGGGAAGGAGAAAGAGAA chr4 - 94230402 21343804 21343803 21343847 72886556 72886555 72886599 44 GGGAAGAAGACAGGAGGGGAGGAAGGGGTGGGGAAGGAAGAGAA ..:............:.....:......x.::.:..:....... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 17001335 NA +3531 chr4 + 190214555 38356064 38356063 38356137 74 CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTTGGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:...........::x...x.xx.x..::....::...........:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 20158938 NA +3214 chr4 + 190214555 38364306 38364305 38364395 90 AAAAAAAAAATAAAAAATAAAAAAATAAAAAAA----------TAAAAAAAATAAAGAAAAGAGAAA-----AAGAAAAAGGAAAAGAAAATAATGGTGATGTAG chr4 - 94230402 59495494 59495493 59495598 34734805 34734804 34734909 105 AAAACAAAGATAGGGGAAAAAAAAGTAAAAAAAAAAATATTCCTAAAATAACTGGAGAAAAAGGAAATTAAAAGGAGAGAGAGAAGGAAAATCATTATAATAAAG ....x...:...::::.x......:........----------.....x..x.::......::....-----.:..:.:..::..:......x..x:.:..:x.. 33M10I24M5I33M 64/90 71.1% 105/94230402 0.0% 15/90 16.7% -21131188 -73099214 +4178 chr4 + 190214555 38367234 38367233 38367344 111 TAGTGTGGAACTTTGGTTGCTT-----TTGGGTAGTCCAACCTTTTGGCTTTCCTGAGCCACACTGGAAGAAGAAGAATTGCCTTGGGCCACACATAAAA----TACACTAACATTAATG chr4 - 94230402 9885830 9885829 9885949 84344454 84344453 84344573 120 TGGTGAAGAAACTTGATTGCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg .:...x:...x:...:......-----:x..::x:.........:..x...:...........x..::x...x.:.....:...x....::..:x...:.----.:.x..:.x.x..... 22M5I73M4I16M 78/111 70.3% 120/94230402 0.0% 9/111 8.1% 28481404 NA +3059 chr4 + 190214555 38379161 38379160 38379204 44 ATTTTTTGTTGTTGTTGTTTTATTTTTGTTTTTGTTTTTGTTTT chr4 - 94230402 11524325 11524324 11524368 82706035 82706034 82706078 44 ATTTTTTGTTGTTGTTGTTTGGTTTTTATTTTGGTTTTAATTTT ....................x:.....:....x.....x:.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 26854836 NA +3747 chr4 + 190214555 38380910 38380909 38381020 111 ATTAATTCA-CTTCAGCACAACTCTTTGACTTAGATTCTATTATTATTATCATCACTATCTTGCAAATGATAAAACTGAGTAACAGAGAGGTTAAGTAACTTGTTCAAGGTC chr4 - 94230402 10729156 10729155 10729262 83501141 83501140 83501247 107 ATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTA-----ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...:...:.-.:...xx.:.x.:..x...xx...:.x-----....:.....x.x.:..:..:..::..:x.........xx...x.x...........:...::..::... 9M1I27M5D70M 74/106 69.8% 107/94230402 0.0% 6/106 5.7% 27651754 NA +9155 chr4 + 190214555 38382595 38382594 38382809 215 GCATGGAAAATAAACATTGAGGTCCCTGCTTCAGCGTTTATCTTCAATGA-TACCTCATCTTTGCCTGGGTAATTATCTCTCGACAGCAGACAGTGCTCCAGCAGCAACGGATAATTCCATTAACATTACCACTT-AAACACAGCCTCTCCAGGCTGC----TCAGGTCCTCCGGTTGCTTGCTAAGCCTTAGGGGCCTCATATCATTTTGGAATTAAAAT chr4 - 94230402 22534843 22534842 22535058 71695345 71695344 71695560 216 GCTTAGAAAATAAACATCTCGG-CTTTGCCTCAGTGTTTATCTCCAATAAATACCTCAGCTTTGCCTCAACAATTATCTCTTCACAGCAGACCATTATCCAGCAGCAACATATAATTCCATTAACATTACCGTTTAAAATATATCCTCTCCGTGCTGCAGGGAAAGGAGCT----GTGTGTGGGAAATGTCAGGGGCACCATGCATTTTTGGAATTAAAAT ..x.:............:xx..-.::...:....:........:....:.-.......x........x:::..........:x.........x:.xx............:x....................::..-...:.:.x.......:x.....----xx...xx..----x..:x..xx..::x.:......x:...::xx............... 22M1D27M1I84M1I22M4I9M4D46M 160/210 76.2% 216/94230402 0.0% 11/210 5.2% 15847752 NA +9369 chr4 + 190214555 38382595 38382594 38382809 215 GCATGGAAAATAAACATTGAGGTCCCTGCTTCAGCGTTTATCTTCAATGA-TACCTCATCTTTGCCTGGGTAATTATCTCTCGACAGCAGACAGTGCTCCAGCAGCAACGGATAATTCCATTAACATTACCACTT-AAACACAGCCTCTCCAGGCTGC----TCAGGTCCTCCGGTTGCTTGCTAAGCCTTAGGGGCCTCATATCATTTTGGAATTAAAAT chr4 - 94230402 22530585 22530584 22530800 71699603 71699602 71699818 216 GCTTAGAAAATAAACATCTCGG-CTTTGCCTCAGTGTTTATCTCCAATAAATACCTCAGCTTTGCCTCAACAATTATCTCTTCACAGCAGACCATTATCCAGCAGCAACATATAATTCCATTAACATTACCGTTTAAAATATATCCTCTCCGTGCTGCAGGGAAAGGAGCT----GTGTGTGGGAAATGTCAGGGGCCCCATGCATTTTTGGAATTAAAAT ..x.:............:xx..-.::...:....:........:....:.-.......x........x:::..........:x.........x:.xx............:x....................::..-...:.:.x.......:x.....----xx...xx..----x..:x..xx..::x.:.......:...::xx............... 22M1D27M1I84M1I22M4I9M4D46M 161/210 76.7% 216/94230402 0.0% 11/210 5.2% 15852010 NA +16460 chr4 + 190214555 38385020 38385019 38385525 506 GACGTATCGATATTCAAGCTCACAAAATAAGCTCAAACTTGAAAAAGATCCAGACTACGGCAACGTTTATTATTTTTAGAGCATAACCTAGTCATTTTGATTAATTCGTTTGGATTG-CTTTTTCCTGCAGCTCCCCAGGGAGAGGTGGGAGGAAAAGGCGGTAAAAACATAAATTTTCTTTGGTGATGAGTTCGCAT--GTTTAGAACTGTAACATGGCAAATCATTGTGAAATCTTCTAATGG-ATGCCTGTCTCATGCCAAATAAGCCCAGTACCCAAAGCACATCAAGAAATAATTGAAAGACACTGGACTGAATCCAAAAGGTTGTGGCTAATGTTTCACCTAATCTCTCTCCC-AGGTCTCTCCTGCCTACTGCCGGCCCTACCCACAAGATGTGAACTTCAGAGC--CTTCTTGCAACTGCTTCTTGGCTATTTTCACCCTCTAACCCTCTGGAAGAAGAATGAGGACTATTATGAAGGCAAAAGCATAAAAGGGGAAAAGATTAG chr4 - 94230402 22539200 22539199 22539693 71690710 71690709 71691203 494 GGCATTTGGATCATCAAA-TCCCAAAGCAAGCAGCAGCTT---------CCAGACTTTTATAACTTGCATTAATTTTAGCCCATTGTACAGTCCTCATGATTGATCTGCTTGGAGTGGCTTTGTTGTAAA----CCCTGAGGGAGGGGAGAACAGGGGTTCATGGAGACGTAA-TTTCCAAGGGTGATAAGCTTGCATCTGTTTTGAGCTGTAAAATGGCAC-TCATTGTGAAATCCTCTCAGAGCATACCTTTTAAATGCCAAACAAGCACAGCACCAAAAGCACATAAAGAAATAATTGAAAGGCTCTGGAGGGAAGCCAAGAGGACGTGGCTAATGTTTCACCTAACCTCACCCCCTCGCTCGCTCTCGCCCA---GCAGCCCTGCCTGCATGACGTGAGCCTCGGAGCTGCAGCAGGCAGCTGCTTCTTGACTGTGCACACTGTCTGACCCACTGGCAGCAGGACAAGAAAAACAAAGAGGCTAAAAACATAAAACAGAGAGAGATTAG .:.:.x.x...xx....:-..x....::....xxx.:...---------.......x:x::...x.x:....x......xx...x::x:....x.:x.....:..::.:.....x..-....x.:x.:x.----...x.:.:....x.:..:x.:::.x:x:.::.:..:...-...:.xxx......:..:.:....--....x..:......x......x-.............:...x.x:.-..:...x.:xx........:....x...:...x.........x................:.x.....xx...x....:...x:....................:...x.:...-x.x..x...::...:.---x.:.....:..::..x..:....:.:..:....--.xx.xx...:..........:..:.x:x...:x...:....x....x..x..:.::..:.xx.:x.x..:.x:....:.......x:.::.:....... 18M1D21M9D68M1I12M4D39M1D24M2I22M1D22M1I113M1I16M3D33M2I99M 340/487 69.8% 494/94230402 0.0% 26/487 5.3% 15845820 NA +3297 chr4 + 190214555 38386362 38386361 38386422 61 AAAGGAAAGAAGGAAGGAAGGAAAAAGTAAGGCAGGGAGGCAGGCAGGAACAAAGAAAGAA chr4 - 94230402 20475871 20475870 20475931 73754472 73754471 73754532 61 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAA ...::...:..::..::...:.::........:...:..:..x:........x.:..:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 17910491 NA +3462 chr4 + 190214555 38386803 38386802 38386854 52 CTGTGGCCAAGTTACTTCACCTCTCTGAGCCTCAGTTTCCCCATCTGTAAAA chr4 - 94230402 1932247 1932246 1932298 92298105 92298104 92298156 52 CTGTGGGCAAATCACACCACCTTTCTGTGCCTCAGTTTCCCCACCTGttaaa ......x...:.:..x:.....:....x...............:....x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 36454556 NA +3090 chr4 + 190214555 38403228 38403227 38403302 75 TTTGTGTGTGTGTGTGTGCATGCGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATATATAGAC chr4 - 94230402 39267139 39267138 39267213 54963190 54963189 54963264 75 TCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAAAC .::..:.:x:.......:::x.....::..xx...........:.:.:x.....::.x.:..::x.....:.:.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% -863911 -93366491 +3474 chr4 + 190214555 38403246 38403245 38403333 88 CATGCGCATA-----TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATATATAGAC--AGCCAGAGAGGCAGAGATTTA-ATATAAGGGA chr4 - 94230402 33398789 33398788 33398884 60831519 60831518 60831614 96 CATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatggga ........:.-----.:.:x:...:.x.:x:x.....:.....................x..--..xx......:.......xx.-..:..x.... 10M5I47M2I21M1I10M 68/88 77.3% 96/94230402 0.0% 8/88 9.1% 5004457 NA +4156 chr4 + 190214555 38404608 38404607 38404752 145 CTTCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTCCTTTTTTTCTTTCTTTCTCTCTTTTTTCTT chr4 - 94230402 9693690 9693689 9693834 84536569 84536568 84536713 145 CCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT .:.:...xx.::......:..xx.:.:....x.:.x.....:....xxx.x.:.:xx:.x::xx....x..x:x.xx...::.:..:...:.:..:..:.:..::..x..::..x:....x..x...:.....:..::...:.:. 145M 86/145 59.3% 145/94230402 0.0% 0/145 0.0% 28710918 NA +4135 chr4 + 190214555 38404613 38404612 38404778 166 TTCCTTCCTTCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTCCTTTTTTTCTTTCTTTCTCTCTTTTTTCTTCCTTATTTTTCTTTCTTTCTTCTTTT chr4 - 94230402 45185595 45185594 45185751 49044652 49044651 49044808 157 TTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTC----TTCCCTTTCTCACTTAGTGCTTCTCACTAC---TTGTCTTTCTAACCACCCCTAATCT--CTTATTCTTTTCTCTTTAATCTTTT ....:..:.:.:xx:..:xx:.....x::..x:.:.......::..:.x.:....x.::..:....:.....xx:..----....:.:....x..:xx.x::....x..x.---..x.......xx.:x:.::.xx...--......:..:.:.....xx...... 77M4D30M3D25M2D25M 101/157 64.3% 157/94230402 0.0% 9/157 5.7% -6780982 -87449420 +3135 chr4 + 190214555 38404619 38404618 38404696 78 CCTTCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTC chr4 - 94230402 8141239 8141238 8141316 86089087 86089086 86089164 78 CCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTC ..:.:.:x.....x..x...:...:....x...x...:::.:x.....:.:.:.....::.::x:x....:.:.:... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 30263380 NA +3152 chr4 + 190214555 38404622 38404621 38404757 136 TCCTTCCTTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCTTCTCTCTCTCTTTCTCTCTCTCTCCTTTTTT-----TCTTTCTTTCTCTCTTTTTTCTTCCTTA chr4 - 94230402 69007395 69007394 69007532 25222871 25222870 25223008 138 TCCATTCTTTTCAATCTT---CTTTTTTTCATCCTTTCCTAAGTCTTTTTGGTGTGTTTCTTCTTTTCTCTTTTCCTGTTCTCATTATGACTCTCAGGTTGGTTTTTTTTGACTTTTTCCATAGTTAATTCATCTTCCCTA ...x.:......xx....---..:......x.:.......xxx.::.:.:xx.x.x.:....::.....::......x:....x:.x.xx.....xxx:.xx......-----.:....:x.xx:.xx..:x......:.. 18M3D87M5I28M 86/133 64.7% 138/94230402 0.0% 8/133 6.0% -30602773 -63627629 +3091 chr4 + 190214555 38404632 38404631 38404698 67 TCTTTCTTTCTCTCTTTTTCTTTCTTTCCTTCTTTCTCTCTTTTTCTCTCTTTCTTTCTTCTTTCCT chr4 - 94230402 18988826 18988825 18988892 75241511 75241510 75241577 67 TTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT .:..x........xx.::.x...:....:.....:..:.:.:.....x...x.xx...:.x...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 19415806 NA +3505 chr4 + 190214555 38404728 38404727 38404802 75 TTTCTTTCTTTCTCTCTTTTTTCTTCCTTATTTTTCTTTCTTTCTTCTTTTTTTGAAGATGATTTGGCTCTGACA chr4 - 94230402 15963381 15963380 15963455 78266948 78266947 78267022 75 TTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGATTTATCTCTGTCA .....:..............::...::xxx.....:...:xx....:x....:.x.:.x......:x.....x.. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 22441347 NA +5536 chr4 + 190214555 38413906 38413905 38414043 138 AAAAAAAAAAAAAGATCAAAAGACTATTTTCCTTGCACAGTATATTACTTCCTGCAATTCATCAAAATTCTTTTCATGGG--TAAAGGTCACTTTCTATTTCTGTATGGCATCTGTGTGTGTTTTGTTGAAAAAGGTGTG chr4 - 94230402 22548448 22548447 22548584 71681819 71681818 71681955 137 AAAAAAAAAAATAGAGCAGGAGG-TGTTTTTCCCATATAGTCTATTACTTCCTGCAATTCATGAGGACTCTTTCCTTGTGCATAAAGGTCACCTTTCATTTATGGACTG--TCTCTGTTTGGTTCACTGGAAAAAAAGTG ...........x...x..::..:-.:....:.::::.:...x....................x.::.:.....:.x..x.--..........:..::....x..x.:x.--...x...x..x..:::..:....::x... 23M1D56M2I27M2D29M 98/135 72.6% 137/94230402 0.0% 5/135 3.7% 15865458 NA +3043 chr4 + 190214555 38418285 38418284 38418354 70 TTTCTATTTCCTCCTCTTCCTCATCTTTCTTCACTTCTTCTTTCTCTTTCTTTTCCTCTTTGTAGTATTG chr4 - 94230402 83441847 83441846 83441916 10788487 10788486 10788556 70 TTTTTCTTCTCTGATCTTCCCTCCCTCCCTTTTCTGTTCCTTTCTATTTCTTCTGCTCTTTGTAGTCCTG ...:.x..::..xx......::x:..::...:x..x:.:......x......:.x...........x:.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -45023562 -49206840 +9201 chr4 + 190214555 38455514 38455513 38455746 233 GGCTTTGAAGTCCTCTGCACACCTGTGTAGATTATAAAGCAGAG-AGGCTGGTCT-TCCACACCCAAACTCTAAATTCACAATGCAACACAAC-AGTTAAAACATGCCCTCTAGCATCTTGTTTAAAAGTTAAACCCAAGCTTGA-TATAATCTGAAGTGGTTAACCCTTGCCC-AGATTGAGCACATACTTCCCG--TGCTGAAGAAGGAGAATAGACTCTCTTTA-TGTATAACTCTTT chr4 - 94230402 22556869 22556868 22557108 71673295 71673294 71673534 240 GGCTTTGAAGTCCTGTGCACACCTGCACAGATTACAAAGAAGGGAAGGCAGGTCTCTCCACACCCAAACTGTAAATTAACAATGCAACATGTCAAGTTAAGATATGCCCTCCAGCACCCTGTTTTAAAGTCAGACCAGTGGTTGACTATCTCCTGATATAGTTAACCCTTTCCCTGGGTTTTATACCAGCTTCTAGTCTCCTGAAAGAAGA-AATGTACTTACGTGACTGTGTGATTTTTT ..............x..........:::......:....x..:.-....x.....-..............x......x...........::x.-......:.:........:....:.:.....x.....:.:...x:x.x....-...xx:....x:.:..........x...-:.:..xx::..xx:....:x.--.x.....::.:..-...:x...:x.x.x.-...:.:.:.:... 44M1I10M1I37M1I51M1I28M1I21M2I13M1D15M1I13M 175/232 75.4% 240/94230402 0.0% 9/232 3.9% 15898645 NA +3147 chr4 + 190214555 38518400 38518399 38518458 59 AAAAGCAAACACAAAACAATGTTATAGTGTGTGTGTATGTGTGCGTGTGCACATGTGCA chr4 - 94230402 35523319 35523318 35523377 58707026 58707025 58707084 59 AAAAGAAGACAGCAAGAATAACTATAGTGTGTGCATATGTGTGTGTGTGTACATGTACA .....x.:...xx..:x.xx::...........::........:.....:......:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 2995081 NA +3470 chr4 + 190214555 38551301 38551300 38551354 54 TGTAGGGAAGAAAAAACAAACAAACAACAAAAAAGATAGGCACGAAAATCCTTA chr4 - 94230402 75828802 75828801 75828855 18401548 18401547 18401601 54 TGGAGGGAAGAAAAAACAAACAAACAACAACAAATACAGACACAAAGGTATTTA ..x...........................x...x.:..:...:..::.x:... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -37277501 -56952901 +8333 chr4 + 190214555 38611148 38611147 38611455 308 CTTCCCATCTCACAATGAGTGCCTTGGAGAGATGGTGGTGTGCCAGGGGTGGGGGAAGAGCTGTTTTTAAAGAACCCAAACAAAAATTGCAGAAACTGCAAAACCCAAATGTTTGCAGTATCTAAAC--TGGTGGAGAAACTGT--GGGGTAGAAACTTACAGTCTGCACTAACAAGTACCTGAGTGGCCC-GGAAGTACAGAGCTCTCCGAGCTGAATCCTGTGAACTGCAGGTGCAGGTTACAGACGGGAGGTTCGGCTGTGGGAATGTGCCAAAGACATAACAACACTCAGTTGACAGGAACCAAGTTTA chr4 - 94230402 22595862 22595861 22596161 71634242 71634241 71634541 300 CTTCATGTCCCACATTTCATGCTGTGGAAAAGCTGCAGCATGCCAGAA-------AGGAGCTCTTTTTCAATATACAGAAATAAAACTGAGAAAACCAAAAACCTACATTATTTACTGCATCTAAATCATGGTA-AGCAACAGCCCTGGCCAACCAGCCACAA-----ACCAAAAGACACCTTAGTGGTCCAGGAAGGTCAGAGTTCTTTGAGTTAGATATTGAGCAATGGAGGTGCAGGCTGCAGATGGGAGGTTTGGGTGTGAAAGCATGCCAAGTGCATAACAAAACTCGATTGAAGGAAGCCAATTTTA ....x::..:....x.xx:...:x....:.:::x.::.::......::-------.:.....x.....x..x.xx.x:..xx....:..x::....::x...x.:xx.x.:...:.x.:.......:--....:-..x...x.:--x..x:.:xx.x::...:-----..:..x.:::....x.....:..-.....xx.....:...::...:.::..x:..x.x.x..x.........:.:....:........:..x....::.:::......:x:........x....::....x:.:.:....x.... 48M7D72M2I5M1D9M2I17M5D23M1I121M 191/295 64.7% 300/94230402 0.0% 18/295 6.1% 16015286 NA +10266 chr4 + 190214555 38613084 38613083 38613309 226 CTTTAAGAAAATCTTCTTTGCTTGGCTAAATGACAATGTTCAAGAAATGCCTGCCACAGA----AGCATAAAAAATCCTTGGCAACATTCCAGAAGAAATTCACCCTGCATAATGTGTTCCAGCAAACGCTCAATAGCTTTCTGGTGAACCTGCTGGCTCAGTGTACACTTGAACAGGATCTAGAGAGAACAAAAGAAAAACTGATAGACATTTTCCTTTTTGTCAGTCT chr4 - 94230402 22596849 22596848 22597070 71633333 71633332 71633554 222 CTTCAAGCAAATGATCCTTGCTTGGCTACAGGGCAATATTCAAGCAATACATACCACAAGGTTTAACATAACA--------GCAGCCACCTAAAAGAAATCCACCCTGTGTAACGCATTCCACTGAAGTCTCAATAGCCTTTCAGTGAACCTACCGGCTCACAGGTTCCTTGAATGGGATCTTTAAAGAACAAAAGAAGATCTGATAGACATTTCCCTCTTTGTAAGGCT ...:...x....xx..:...........x.x.:....:......x...:.x.:.....::----.:.....x.--------...:.xx:.:.:.......:.......::...:.::.....x::..xx.........:..:::........:.:......xx.xx:x......::......xx.:............:.x.............:...:.....x..x.. 60M4I9M8D149M 161/218 73.9% 222/94230402 0.0% 12/218 5.5% 16016235 NA +3579 chr4 + 190214555 38625276 38625275 38625362 87 GACTCCGTCTAAAAAAAAAAAA-AAAAAAAAGCAAATATATATACATATATATATATATATATATATATATATATATATATAGAGAGA chr4 - 94230402 59708308 59708307 59708395 34522008 34522007 34522095 88 GACTCTGTTTAAAAAAACAACATAAAACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACAAAGA .....:..:........x..x.-....x...:..x..x.........xx.xx.x.x.:.:........:.:...:.:.:.:.x.:... 22M1I65M 63/87 72.4% 88/94230402 0.0% 1/87 1.1% -21083032 -73147370 +3478 chr4 + 190214555 38625303 38625302 38625378 76 AAAGCAAATATATATACATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398798 33398797 33398873 60831530 60831529 60831605 76 AGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:.x..x...x..:..:x..x.x:.:.:::.:.:.:....:.:.......:.:.............x.....x... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 5226505 NA +3472 chr4 + 190214555 38625310 38625309 38625380 71 ATATATATACATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x..::..x..x.x:.:.:::.:.:.:....:.:.......:.x.............x.....x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 5226507 NA +3378 chr4 + 190214555 38625312 38625311 38625382 71 ATATATACATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x.::...x..x.x:.:.:::.:.:.:....:.:.......x.x.............x.....x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 5226509 NA +3113 chr4 + 190214555 38626478 38626477 38626547 70 CTCCCGGGTTCAAGTGATTCTCCCACCTCAGTCTCTCAAGCAGCTGGGATTACAGGCACCCGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:...........x...x.xx:x.....:..:.....:......:.:....--.::x.:....::.. 54M2D14M 49/68 72.1% 68/94230402 0.0% 2/68 2.9% 20429339 NA +3016 chr4 + 190214555 38631013 38631012 38631082 70 AGTCATTTGCAAGGCCTTTTTTTTTTTTTTTTTTTGAAATGGAGTCTCACTCTGTCGCCCAGGCTGGAGT chr4 - 94230402 56339526 56339525 56339595 37890808 37890807 37890877 70 AGGCATTTCCAATGCTTTTTTTTTTTTCTTCTTTAAAAAAAGATCTCCATTCTGTCTTTAAGACTGCAAT ..x.....x...x..:...........:..:...x:...x:..x:::..:......x::x..:...x.:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -17708513 -76521889 +3300 chr4 + 190214555 38666356 38666355 38666418 63 GCACAGTGA-TGCTCTTTTTTTCCTTTTTTTTTCTTTTTTTTTTTCCTTACCTGTACTTAGTCT chr4 - 94230402 25237972 25237971 25238035 68992368 68992367 68992431 64 GCAAAGTGAGTGCTTTTTCTTAAATCTTTTTTTTTTTTTTTTTTTACTAACCTGTACTTGATTT ...x.....-....:...:..xxx.:.......:...........x..x..........::.:. 9M1I54M 50/63 79.4% 64/94230402 0.0% 1/63 1.6% 13428384 NA +29269 chr4 + 190214555 38667078 38667077 38667525 448 CTTATTTGTAAATAGGGCAGGTCCCCTGTATAAAGCTGGTGTTATTATTCACACCCGTAGAACAAACACCTCCACCCCCCTGTTGTTGTCTTAAAAAACTCCAGCTGCTCATGAATATAGGGTCAGGGAGGGCCGGCTAAATGTTTCTCTGTGCTTTCTCTCCAGCACAGCCAGCAGAGCTGTTTCCTGTTCTTTGTTTCAAGGCTGGGGTTTGCGTCATACATTCCAAGTGGCATATGT-GTGCTCTTTCCTGTTTCAGGCTGTTTTCTGGTAGATCAGTAGCCCAGACCAGGCTGA-GGTCCCTGCCCCTAAACTCCGTATCCCCACCCATGGAGTTATCATGTCTCTACACACTTGATATTGCTTAAGACGCCTGTGTTATGTCATAATGAGAAGTC--AGTTAACCTTTTTACGTACACCCTTTGCTCC-ACTGCATTTGTCTGGGTGA chr4 - 94230402 22623117 22623116 22623567 71606836 71606835 71607286 451 CCTATTTGTCAATAGGGCAGGTCCCCTGCATAAGGACAGTGTTTTTCTTCACACCCAATGAACAAACACCTCCACCCAC-TGTTGTTGTTTTAAAAGACTCCAGCTGCTCATGAATATAGGGTCAGGGAGGGCCGCCTAAATGTTTCTCTGTGCTTTCTCCCCAGTGCAGCCAGCAGAGCTGTTTCCTGTTCTTTGTTTCAAGGCTGGGGTTTGCGTCACACATTCCAAGTGGCATATGTGGTGCTCTTTCCTGTTTCGAGCTGTTTTCTGGTGGATTGGTGGCCTGGTCCAGGCCCCTTGCCACTGCCCCTCAACTCCCTATCCCCACCCAGTGAGTTATCATGTCCCTGCACACTCGCAGTTGCTTAAGATGCCTGCATTATGTCATCATGAGATTTCCAAGTTAACC-TTTAACGCGCACCCGCGACTCCTAGTATGTTTATGGGGGTGA .:.......x..................:....:.x::.....x..x.........:xx..................x.-.........:......:......................................x........................:....::....................................................:....................-.................::.............:...::..:...::.x......:xx-x.:.x........x......x............xx.............:..:......:.xx:..........:.....::.........x......xx..--........-...x...::.....x:x:....-.x.:::...:.xx...... 79M1D160M1I57M1I101M2I8M1D22M1I19M 381/446 85.4% 451/94230402 0.0% 7/446 1.6% 16043961 NA +21477 chr4 + 190214555 38667078 38667077 38667349 272 CTTATTTGTAAATAGGGCAGGTCCCCTGTATAAAGCTGGTGTTATTATTCACACCCGTAGAACAAACACCTCCACCCCCCTGTTGTTGTCTTAAAAAACTCCAGCTGCTCATGAATATAGGGTCAGGGAGGGCCGGCTAAATGTTTCTCTGTGCTTTCTCTCCAGCACAGCCAGCAGAGCTGTTTCCTGTTCTTTGTTTCAAGGCTGGGGTTTGCGTCATACATTCCAAGTGGCATATGT-GTGCTCTTTCCTGTTTCAGGCTGTTTTCTGGT chr4 - 94230402 22611133 22611132 22611404 71618999 71618998 71619270 272 CCTATTTGTCAATAGGGCAGGTCCCCTGCATAAGGACAGTGTTTTTCTTCACACCCAATGAACAAACACCTCCACCCAC-TGTTGTTGTTTTAAAAGACTCCAGCTGCTCATGAATATAGGGTCAGGGAGGGCCGCCTAAATGTTTCTCTGTGCTTTCTCCCCAGTGCAGCCAGCAGAGCTGTTTCCTGTTCTTTGTTTCAAGGCTGGGGTTTGCGTCACACATTCCAAGTGGCATATGTGGTGCTCTTTCCTGTTTCGAGCTGTTTTCTGGT .:.......x..................:....:.x::.....x..x.........:xx..................x.-.........:......:......................................x........................:....::....................................................:....................-.................::............. 79M1D160M1I32M 249/271 91.9% 272/94230402 0.0% 2/271 0.7% 16055945 NA +5189 chr4 + 190214555 38669383 38669382 38669473 91 TGTTTCTCATCTTAAGCAGTCATGCCCGAGCTGGAGACAGGAAACCAGACAGCAGTCTGCCCTGATAAGGGACAGCATTGTCTGAAGGCGG chr4 - 94230402 22625633 22625632 22625715 71604688 71604687 71604770 83 TATTTCTCTTTCTAAACAGT--------AGCCTGAGACAGGAAACCAGACAGCAGTCTGCCCCGATAAGGGAGAATATTGTCTGATGGAGG .:......x.::...:....--------...:x.............................:.........x.::.........x..x.. 20M8D63M 70/83 84.3% 83/94230402 0.0% 8/83 9.6% 16043750 NA +5189 chr4 + 190214555 38669383 38669382 38669473 91 TGTTTCTCATCTTAAGCAGTCATGCCCGAGCTGGAGACAGGAAACCAGACAGCAGTCTGCCCTGATAAGGGACAGCATTGTCTGAAGGCGG chr4 - 94230402 22613569 22613568 22613651 71616752 71616751 71616834 83 TATTTCTCTTTCTAAACAGT--------AGCCTGAGACAGGAAACCAGACAGCAGTCTGCCCCGATAAGGGAGAATATTGTCTGATGGAGG .:......x.::...:....--------...:x.............................:.........x.::.........x..x.. 20M8D63M 70/83 84.3% 83/94230402 0.0% 8/83 9.6% 16055814 NA +14765 chr4 + 190214555 38673699 38673698 38674043 345 CTAGGCCTCAGTTTGGAAACTTGTCAGGCT-TCTGCTTGGTTGTTACCTTTGCACCTGTCCTTATTGACATGCAAAATC-AATTGCTTCACTTGGTCTTTCCGAAGTACAGGGTGTGGGCAGAATCTTATCTGAAGCCATGTCCTGTTTGGACAAGTTGGACTTGCCTTGGCAACTCTCCATAGGGTGGAGCAGATGGGTGGAGGCAGGAAAGTAAAATTGGGTGGCTTGTTAGCAGAGAGAG--------------GAGAGAGGGTGGGTTGTTTGCTCACTGGATC-------ATTAT---ATTTCATCTGAAATGAAATAATTAACTTCTTT-----CCCATTTATAATACACATTAATGCAAAATAACTAAT chr4 - 94230402 22616295 22616294 22616665 71613738 71613737 71614108 371 CTGGACTTCACACTGGAAAATACCGAGGGTCTTTGCCTGGACTTTACCTT-GCACCTGTCCTTATTTGCATACAAAACCCAATTGCTTCATTTG-TCTTTCTGAGGTACAGGGCGTGTGCAAAATCTTATCAGAAGCCATGTCCTGTTTGGACAAGTCGGGC-TGACTTGGCAGAGATCCACAGGGTGGAGTGAATGGGAGGAGGCAAGAAAGTAAAACTGGGTGGCTTGTTAGCAGAAAAAGAGAAGGAGAGTAAAAAAAGAGGGTGGAATGTTTGCCTGCCGGATTGCAGTTAATTATTTAGTTTCAGATTACATGCATT--TTAAATTCTTTCAGCCCACATGAAAAAGCCCTATTTTTGTAAAATAATTTAT ..:.:.:...xx:......x.xx:x...x.-.:...:...x:x.......-...............x:...:.....:.-..........:...-......:..:........:...x...:.........x.........................:..:.-..x.......:xxx....:.........:::.....x.......:..........:...................:.:..--------------:.:.........:x.......:::.:....:-------.....---:.....xx.x.x...x.x.--....x......-----.x...xx.x..xx.x:...xx..:.......:.x.. 30M1I19M1D28M1I14M1D67M1D80M14I31M7I5M3I19M2D11M5I36M 266/340 78.2% 371/94230402 0.0% 36/340 10.6% 16057404 NA +13707 chr4 + 190214555 38673745 38673744 38674059 315 CTTTGCACCTGTCCTTATTGACATGCAAAATC-AATTGCTTCACTTGGTCTTTCCGAAGTACAGGGTGTGGGCAGAATCTTATCTGAAGCCATGTCCTGTTTGGACAAGTTGGACTTGCCTTGGCAACTCTCCATAGGGTGGAGCAGATGGGTGGAGGCAGGAAAGTAAAATTGGGTGGCTTGTTAGCAGAGAGAG--------------GAGAGAGGGTGGGTTGTTTGCTCACTGGATC-------ATTAT---ATTTCATCTGAAATGAAATAATTAACTTCTTT-----CCCATTTATAATACACATTAATGCAAAATAA-----CTAATTCATGAGGGGCGAAGA chr4 - 94230402 22627917 22627916 22628260 71602143 71602142 71602486 344 CTTTGC--CTGTCCTTATTTGCATACAAAACCCAATTGCTTCATTTG-TCTTTCTGAGGTACAGGGCGTGTGCAAAATCTTATCAGAAGCCATGTCCTGTTTGGACAAGTCGGGC-TGACTTGGCAGAGATCCACAGGGTGGAGTGAATGGGAGGAGGCAAGAAAGTAAAACTGGGTGGCTTGTTAGCAGAAAAAGAGAAGGAGAGTAAAAAAAGAGGGTGGAATGTTTGCCTGCCGGATTGCAGTTAATTATTTAGTTTCAGATTACATGCATT--TTAAATTCTTTCAGCCCACATGAAAAAGCCCTATTTTTGTAAAATAATTTATCTAATATGTGAATGTCAAGGA ......--...........x:...:.....:.-..........:...-......:..:........:...x...:.........x.........................:..:.-..x.......:xxx....:.........:::.....x.......:..........:...................:.:..--------------:.:.........:x.......:::.:....:-------.....---:.....xx.x.x...x.x.--....x......-----.x...xx.x..xx.x:...xx..:.......-----.....x::...:x.x.:.:.. 6M2D24M1I14M1D67M1D80M14I31M7I5M3I19M2D11M5I31M5I21M 246/309 79.6% 344/94230402 0.0% 41/309 13.3% 16045828 NA +5930 chr4 + 190214555 38680566 38680565 38680698 133 ATACCTTGTTTTGTTT-TCTAGGCCAA-ACACCAGAGCACCCTAGAAGGTTTAACTAAAAGAATGCTCATGTTTGACCCAGTTCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCAGTGGTAAGTTTTCCAAGAT chr4 - 94230402 22620165 22620164 22620299 71610104 71610103 71610238 135 ACACATTGTCTTCCCTGTGTAGGCCAGGACATCACAGGCATCAGAAGAGGTGAATAAAGAAGATGCTAATGTTTGATCCAGTCCCTATCAAGCAAGAAGCCATGGACCCCGTTTCAGTGGTAAGACTTTTAAGAT .:..x....:..x::.-.x.......:-...:..x..xxx:.x::.::.x.x..:x..:.::.....x........:.....:...:..........:...........:..:...........x:..::..... 16M1I10M1I107M 96/133 72.2% 135/94230402 0.0% 2/133 1.5% 16060401 NA +5939 chr4 + 190214555 38680566 38680565 38680698 133 ATACCTTGTTTTGTTT-TCTAGGCCAA-ACACCAGAGCACCCTAGAAGGTTTAACTAAAAGAATGCTCATGTTTGACCCAGTTCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCAGTGGTAAGTTTTCCAAGAT chr4 - 94230402 22631125 22631124 22631259 71599144 71599143 71599278 135 ACACATTGTCTTCCCTGTGTAGGCCAGGACATCACAGGCATCAGAAGAGGTGAATAAAGAAGATGCTAATGTTTGATCCAGTCCCTATCAAGCAAGAAGCCATGGACCCCGTTTCAGTGGTAAGGCTTTTAAGAT .:..x....:..x::.-.x.......:-...:..x..xxx:.x::.::.x.x..:x..:.::.....x........:.....:...:..........:...........:..:...........x:..::..... 16M1I10M1I107M 96/133 72.2% 135/94230402 0.0% 2/133 1.5% 16049441 NA +3865 chr4 + 190214555 38684508 38684507 38684582 75 TTTTGTGGAGGTTTTTTTGTTTTGGTTTTTTGTGTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTTGGTTTTGAGA chr4 - 94230402 88195588 88195587 88195662 6034741 6034740 6034815 75 ttttCCCAAGGTGGTTTTGTACCGTGCTTCTGCCTTTTTTTTTTGTTTTGTTTTGGTTTGGTTTTGGTTTTAAGA ....x:x:....xx......x::.xx:..:..:x..........x....x.....................:... 75M 57/75 76.0% 75/94230402 0.0% 0/75 0.0% -49511080 -44719322 +3035 chr4 + 190214555 38686417 38686416 38686509 93 GCCTGAGTAACAGTGAGACCCTATCTCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAATTCTTTTTCCCTCCTTTAAATAGACCTTTAGTATCT chr4 - 94230402 43431244 43431243 43431336 50799067 50799066 50799159 93 GCCTCAAGGGCAAGGAACCTATGAGTTAAAGAAAAAAAAAAAAAAAGGAGGACAATATCACTGATCCTTCTTTTAAAAAGCCATTTCATGTCT ....x.:x::..:x..:x.:x.:xx.:...:...............:..::.x..x..:x:.xx...:..:......x..x.x...x:.:... 93M 59/93 63.4% 93/94230402 0.0% 0/93 0.0% -4744827 -89485575 +22564 chr4 + 190214555 38688544 38688543 38689084 541 TTATTTGGCTGTTGACACGTTTTCCTTTTCTTTTCTAATAGTCATACCCATCTAATTACATGGAATCCATGAAGCCTAACAAGTATGGGGTCATCTACTCCACACCA------TTGCCTGAGAAGTTCTTTCAGACCCCAGAAGGTCTGTCGCACGGAATACAGATGGAGCCAGTGGACCTCACGGTGAACAAGCGGAGTTCACCCCCTTCGGCTGGGAATTCGCCCTCCTCTCTGAAGTTCCCGTCCTCACACCGGAGAGCCTCGCCTGGGTTGAGCATGCCTTCTTCCAGCCCACCGATAAAAAAATACTCACCCCCTTCTCCAGGCGTGCAGCCCTTCGGCGTGCCGCTGTCCATGCCACCAGTGATGGCAGCTGCCCTCTCGCGGCATGGAATACGGAGCCCGGGGATCCTGCCCGTCATCCAGCCGGTGGTGGTGCAGCCCGTCCCCTTTATGTACACAAGTCACCTCCAGCAGCCTCTCATGGTCTCCTTAT------CGGAGGAGATGGAAAATTCCAGTAGTAGCATGCAAGGTAAATTCCGCCA chr4 - 94230402 22645072 22645071 22645620 71584783 71584782 71585331 549 TTATTTGTTTTTCTTTATTTTTTTCTGCTCCTT-CTGACAGTCATACCCATCCAATTACATGGACCAAATGAAGCCAAACAAATACAGCGTCATTTATTCTGCACCAAGCATGTTGCACAATAAATTCTACTCAAACCCTGACGGACTGTCGAATGGAATCCAGATGGAGCCAGTAGACCTCACGGTGAACAAGCGAAACTCACCGCCTTCGGCTGGCAGTTCTCCCTCCCCTTTAAAATTTCAGACTGTGCATAGGAGAACTTCCCCTGGATTGACTCTGTCCTCACCCAGCTCTCCCATCAGTAAATTCACGCCATCACCCCCAGGAGTACAGCCGTTATCCATGCCTATAACAATCCCTCCTGTAATGGCTGCCGCTCTTTCCCGCCATGGACTGAGAAGCCCTGGAATACTCCCGGTCATTCAGCCTGTTGTAGTCCAGCCAGTTCCTTTCATGTATGCTCCCCATCTCCAGCAGCCCATCATGGTGTCCACAGTCCTTACAGATGAGATGGATAGTCCA---AGCAGCATGCAAGGTTGGTGCTGTCA .......x:.x.:xx:.:x....:..x:..:..-..:.:.............:...........x:xx........x.....:..::.x.....:..:..::.....------....x::.x..:....x::x:.x...x..x..x......x.:.....x..............:....................:.::.....x...........x.:...x......:..:.:..:..:.x.x.:x::..:x.....:.:..x.....:....x:x..:.:..x:.....:.x..x..x.:x....x.x.:..x:.x:.:.....x..:.....x..xxx.:....xx.:x.x..x..x..x..:.....x..:..:..:..x..x......x.:x.:.....x..:..x..x..x.....:.....x..x..:..x.....x..:..:..:.....::.xxx:..:...........:x.......x...x:.x------.:..x........x.:.:.x---..:............x::.x.:.:.. 33M1D73M6I385M6I20M3D26M 379/537 70.6% 549/94230402 0.0% 16/537 3.0% 16043472 NA +7683 chr4 + 190214555 38689727 38689726 38689886 160 AGTACCTGTAATTGAATCATATGAGAAGCCTATATCACAGAAAAAAATTAAAATAGAACCTGGGATCGAACCACAGAGGACAGATTATTATCCTGAAGAAATGTCACCCCCCTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGTAAGTA chr4 - 94230402 22645938 22645937 22646094 71584309 71584308 71584465 157 AGTGCCTGTTATTGAGTCCTTCGAGAAGCCAGCGCTGAAGAAAACAATTAAAGTAGAACCGGGAAGCGAACCAGCAAAGACTGACTTCTATCCTGAGCGAATGTCACCTCC---AATGACCTCATTGTCTCCGCAGGAAGTAATGCTGCAAGAGTAAGTA ...:.....x.....:..x.x:........x::::::x......x.......:.......x..:.x.......xx:.:...x..:.x:........:x:.........:..---.....x....x....:..x.x.x...:.x..:.............. 111M3D46M 117/157 74.5% 157/94230402 0.0% 3/157 1.9% 16043789 NA +7683 chr4 + 190214555 38689727 38689726 38689886 160 AGTACCTGTAATTGAATCATATGAGAAGCCTATATCACAGAAAAAAATTAAAATAGAACCTGGGATCGAACCACAGAGGACAGATTATTATCCTGAAGAAATGTCACCCCCCTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGTAAGTA chr4 - 94230402 22639192 22639191 22639348 71591055 71591054 71591211 157 AGTGCCTGTTATTGAGTCCTTCGAGAAGCCAGCGCTGAAGAAAACAATTAAAGTAGAACCGGGAAGCGAACCAGCAAAGACTGACTTCTATCCTGAGCGAATGTCACCTCC---AATGACCTCATTGTCTCCGCAGGAAGTAATGCTGCAAGAGTAAGTA ...:.....x.....:..x.x:........x::::::x......x.......:.......x..:.x.......xx:.:...x..:.x:........:x:.........:..---.....x....x....:..x.x.x...:.x..:.............. 111M3D46M 117/157 74.5% 157/94230402 0.0% 3/157 1.9% 16050535 NA +11247 chr4 + 190214555 38694742 38694741 38694908 167 ACAGGAATCACCCTTCGGTCATCGTGCAGCCTGGGAAGAGACCTTTACCTGTGGAATCCCCGGATACTCAAAGGAAGCGGAGGATACACAGATGTGATTATGATGGATGCAACAAAGTGTACACTAAAAGCTCCCACTTGAAAGCACACAGAAGAACACACACAGGT chr4 - 94230402 22651138 22651137 22651304 71579099 71579098 71579265 167 ACAGGAATCACCCTTCGGTTATAGTTCAGCCAGGGAAGAGACCTTTGCCAGTGGAGTCACCAGACACGCAAAGAAAACGCAGAATACATCGGTGCGATTATGAAGGCTGCAACAAGGTCTACACTAAAAGCTCCCATCTGAAAGCTCACAGAAGAACCCATACAGGT ...................:..x..x.....x..............:..x.....:..x..:..:..x.....:..:..x..:.....:x.:..:........x..x........:..x.................::.......x...........x..:...... 167M 139/167 83.2% 167/94230402 0.0% 0/167 0.0% 16043604 NA +4474 chr4 + 190214555 38694846 38694845 38694919 74 GGATGCAACAAAGTGTACACTAAAAGCTCCCACTTGAAAGCACACAGAAGAACACACACAGGTAATAGAAACAC chr4 - 94230402 82690637 82690636 82690710 11539693 11539692 11539766 74 GGTTGCACAAAAGTGTATACCAAGAGCTCCCACCTGAAGGCACACCAAAGGACTCACACAGGTAAGAGCACCAC ..x....xx........:..:..:.........:....:......x:...:..x...........x..x.x... 74M 59/74 79.7% 74/94230402 0.0% 0/74 0.0% -43995791 -50234611 +27953 chr4 + 190214555 38697062 38697061 38697708 647 TTTTCTTTTTCCTTTTGCAGGAGAAAAACCCTACAAATGTACATGGGAAGGGTGCACATGGAAGTTTGCTCGGTCTGATGAACTAACAAGACATTTCCGAAAACATACTGGAATCAAACCTTTCCAGTGCCCGGACTGTGACCGCAGCTTCTCCCGTTCTGACCATCTTGCCCTCCATAGGAAACGCCACATGCTAGTCTGATTGCCTCTGTGTCCTGCCTCAGCGTGACTCCCCACTCACCTGGCTCTCTCTCTGTCCTGCCTCCCATTATCTAACACA-TTTTTTACATGTACATTTTAATTT-GATTCAGCTGGTCTGAATCTCT-GAATTTATATCATCCAAAACTTCCATATGGTCAGTAGTAGATGTTCTCTAATCCTCCC-TCTCCTTACCACGGGTCAGACCTAAAGAATGTGAACACTT----------TTTTTTTTTTTTCTGGGGATGCTAAGCAAACCCTTCTTACAGA---TACGTTTAATGT-----AATAAGAACAAGGGAACATGTAAACTAACATAACCAATTGTCAG-TTCTCCATGTATTC-CTCAAAAGAATGTCAG------AGTAAATGTATTAGAAATACAGTATCCAGACTGCTAGTCCTTGCCAGAGACATTCTTACCTCTGCCCTGT---------GATAATATTTTATGCTTGACAGTG chr4 - 94230402 22652397 22652396 22653025 71577378 71577377 71578006 629 TTCTCTGTTTCTTCCTTCAGGTGAAAAACCATACAAATGCACTTGGGAGGGATGCACGTGGAAGTTTGCTCGCTCTGATGAACTAACGCGGCATTTCCGCAAGCATACGGGAATCAAACCTTTTCAGTGCCCAGACTGTGACCGTAGCTTTTCACGTTCGGACCACCTTACTCTTCACAGAAAACGTCACATGCTAGTCTGAGTGTCT-TCTGTC----------------CCCGACTC--------------CTGTC----------------AACACGTTTTTTTACACATGCATTTTAATTTGGGTTCAGCTGGTCTGAATCTCTGGAGTTTATACCATTAAAAGCTTACATATGGTCAGTACTAGATGTTATCTAACCCTTCTATGTCCTTGCCACGGGTCAGACCTAAAGAATGTGAACAATTATTTGTTTTGTTTTTCTTTCTCCTGGGGATGCTAAGCAAACCCTTTCTTCAGAGAGTATGTTTAATGTATTCCATTGTGAATAAGGGAATTTGTAAACAAACAG---CTTTTGTTGGTTTCTTCATATAATCAACCCAGTGTATACTGATAAACTAGTAAATGTTTCTG------AGTATCAAAAATGCTCATCCTTGGCAGAGACATTATT-TATGTGCCCTGTACAAGGCACACTCAGATTTTATGCTCAGCAATG ..:...x....:.::.x....x........x........:..x.....:..:.....:..............x..............:x.:........x..:.....x..............:........:...........:.....:..x.....x.....:...:.:..:..:..:.....:...............x..:..-.x....----------------...x....--------------.....----------------.....:-.........::.:...........-.:....................-..:......:...:x...:...x.............x........x.....:...:.:-.x.....:.............................x..----------.....:...:.:.......................::.x....---..:.........-----.x.:x...:.......:x.......x....x---.xx....::.-....:...:..x..-x:.x.:x.x..:::::------.........x.:x.------......x.:.x....x:......x..........x..-:x.x........---------:x.x.x..........:::..:.. 208M1D6M16D8M14D5M16D6M1I24M1I22M1I58M1I40M10I43M3I12M5I31M3D10M1I14M1I16M6I14M6D37M1D12M9I24M 480/590 81.4% 629/94230402 0.0% 96/590 16.3% 16044665 NA +8269 chr4 + 190214555 38697066 38697065 38697251 186 CTTTTTCCTTTTGCAGGAGAAAAACCCTACAAATGTACATGGGAAGGGTGCACATGGAAGTTTGCTCGGTCTGATGAACTAACAAGACATTTCCGAAAACATACTGGAATCAAACCTTTCCAGTGCCCGGACTGTGACCGCAGCTTCTCCCGTTCTGACCATCTTGCCCTCCATAGGAAACGCCAC chr4 - 94230402 82693426 82693425 82693608 11536795 11536794 11536977 183 CTCTTCCCT---GCAGGTGAAAAGCCCTACAAGTGCACCTGGGATGGCTGTGACTGGCGCTTCGCCCGCTCCGACGAGCTGACCCGGCACTACCGCAAGCACACAGGTGCCAAGCCCTTCAAGTGCCTGGCCTGTGGCCGGTGCTTCTCTCGCTCTGACCACCTGGCACTGCACATGAAGCGGCAC ..:..:...---.....x.....:........:..:..x.....x..x..::xx...x:x..:..:..x..:..:..:..:..xx.:..:.x...x..:..:..x..x::...:..:...x......:..x.....:...xx.......:..:........:..x..x..x..:.x...:..x... 9M3D174M 130/183 71.0% 183/94230402 0.0% 3/183 1.6% -43996360 -50234042 +29464 chr4 + 190214555 38700269 38700268 38701058 790 TGTATATTTTATTAAACACCCATCTGCACTATCAGTATTGCACTAATGTGGAATTTGAAAGACTATTTTGCTGATACT--GTATATATGCGCATCATTCCTGATTAGATTGTTGTAAAGACAATCTGAAAGATCTAAG-----GTTTTAAAATAATTTGGTTTGAAAATATACAGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTC----TTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAAATGATCGCAAATTCACCTAAACAATACATTTACAAAGCCATCTTTACATGCATTAAACGAGGGCTACAACAATATT------GTTTTACAAATACTAGCACTTTTTTTTCTGTTATGTACTT--AGTGTTAGAGGGTCAAAATAATCTTTCTGCTTAGCATCTCTTAAACCATACCTGCAAATATAGCAGGATTATTACATTTACAGTACTTTAATACTTGTATAAACTATGCAGAAATTTTT----AATAAAGTGTAATATATTTTATAAGCTAATAAGACTGAATGGG---TAAAGGTTTTTAGCATGCATTAGTATA-CTTGCAGATACTGAAACATTTTGGTAATCTTTCTTACTAAAGATGTGAATGTTTAATGTACCTTCTCTGTTTCTACTCTGTAGTCCAATGGGAATTCAGTAATGACATTTTGTCATGTCAAACTGTGAACATAAATTTGTACTGTACAGTCCTCATATACTATATACAGTATGCAATATATAT-TAT-ATACTTGTTAATAAAACCATCAGAATATTAAATGTGATCATGTGATTA chr4 - 94230402 22655581 22655580 22656338 71574065 71574064 71574822 758 TGTCTATCTTA--AAAAACCC--TTTCACTGGCAGTGTTGCACTG-TGCACTAAGTAACAAATGATGCTGCTCCTGTTTCGTCCTTTTGGTTATAATGTTTTACTGGGTTCTTT----GACAATCCCATAAGGCTCAGCGGGTATTACGGTGTGCTTTTATTTAAGTACACACTGCTGTTCTGCAGCGATACTTCTAAT----------GCCACGTCTTGTCCAAATGCATTGTTGTCTCTGTCAAGGTTATCTACATGTAGATGAATATAAATCCATTT------TACATATCCGAAT----------------------AGGGCTACACCAGTTTCCATTACGTCTTACAGATATTAGCACTTTTATGCTATTTATGTACTTCAAATGTTAGAGGGTCAAAATAATCTTTCCGCTTAGCATCTCTCA-------CTTGCAGATATAGCAGGGATGTTATATTTAC-----TTCAATACGTGTATAAACTATGCAGatttttttttttaataaaatgtaatatattttataaGCTAATAAGACTGAATGGTAATTAAAGGTTTCTAGCGTGCGTTACTATAACTTGCAAATATGGAAACATTTTGGTAATCTTTCTTACTAAAGATGTGAATGTTTAATGTACTTTTACTGTTTCTACTTTGGTAGCCAATGGGAATTCAGTAATGACATTTTGTCATGTTGAACTGTGAACAGAAATTTGTACTGTACAGTCCTC--ATACTATATTTAGTACAAAATACATATCTATGATAACTGTTAATAAAGCCATCAGAATATTATTTGTGGTCGTGTCATCA ...x...:...--...x....--:.x....:x....:.......:-..::xx.xx.:.x.:.:x..x:....xx.::.--..x:x.x..xx:..x..x::.x.:.:.:..x..x----.......:x.x.::x..x..-----:..x:::x:.:x...x:...:.:x.:.:..x.:...::..x..x:..xx:.x.x..----------..:x..xx:....----.x:...x.:x...:x..........x.x.:xxx..:....x:::....:..::.------.....x.x.:..x----------------------.........x..:.x.:------..:.....:...:..........x.x::xx..........--.:.........................:.............:.-------.:....:..........:x.:...:......-----..:.....x.................xx.....----......:...................................x---.........:....:...:...x....-......:...:x.................................................:..:x...........:..xx:x..................................::...........x......................--.........x:....::x....:....-...-...x:..........:..............xx....:..:...x..:. 11M2D8M2D22M1D32M2I34M4D20M5I56M10D13M4I54M6D13M22D17M6I40M2I43M7D31M5D33M4I43M3I27M1I154M2D27M1I3M1I48M 560/729 76.8% 758/94230402 0.0% 90/729 12.3% 16044688 NA +3307 chr4 + 190214555 38705775 38705774 38705986 212 AGCCTCCTGAGTAGCTGGAATTACAGGTAC-ACACCACCATGCCCGGCTATTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCA--CCTGCCTCAG--CCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACTGC-----GCCTGGCCCTCTCTCCCTAC chr4 - 94230402 687891 687890 688105 93542298 93542297 93542512 215 AGCCTCCTCAACAGAACTAATTACTCCCCCGACATCTCCACTTCTGCCTAATCTTTTTTTTTTTTTTTTTCCCCTTTTAGTTTGTAGAACAAAGAGTTTATTCATTTTGTCCAGAGTTCTCCTGTTCTGCAGACCTCGTTCCCAAAGCCCGCGTCCGGCACGCTCACGGTACAG-------AGCTGTCAGCCTCTGCAAACAGCCCAACCCCTGCTTTCTGC ........x.::..xxxx......xxx:x.-...:.x...:x:.:.x...x.:.................::::.x.xxx...:xx::.x.x..:....xx:...x...x:...:x.xx..:..xx..x.x........xx:.x.--..:..x..x.--x.x....x:..:.x.-------..x...x....x....-----...:::...::x..::..:. 30M1I114M2I10M2I15M7D16M5I20M 128/205 62.4% 215/94230402 0.0% 17/205 8.3% 38017884 NA +3343 chr4 + 190214555 38706910 38706909 38706997 88 ATATGAATATATATCTACA------TATGTATATGTATATATGTATATGTGTATGTGTATATTCATATATATATATTTAAAAAATTATTTTTTC chr4 - 94230402 86633724 86633723 86633813 7596590 7596589 7596679 90 ATGTGAATATGTACTTGGAAGTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATAAAC----AAAGTTATAATTTC ..:.......:..::.:x.------.:...x............x..x....:......:.:..:...x:....x.:----...:....xx.... 19M6I51M4D14M 63/84 75.0% 90/94230402 0.0% 10/84 11.9% -47926814 -46303588 +3637 chr4 + 190214555 38717118 38717117 38717197 80 CTGCAGCCTCTACCTCCCCGGTTCAGGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACACGCACGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGT ..:.....:xx.x..:.:x......:.:xx...x.xx.x........::...........:.:......::.:....::. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 20519992 NA +3042 chr4 + 190214555 38727115 38727114 38727188 74 CTGCAACCTCTGCCTCCCGGGCTCAAGCCATCCTCCCACCTCAGCCTTCTGAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:...:.....:xx.:.x.xx:x.........:::..:......:......x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 20529989 NA +3139 chr4 + 190214555 38742733 38742732 38742795 63 ACACCACCATGTATGTGCATGCACACACATACACACATATGCACACACATATACACATGCATG chr4 - 94230402 48167043 48167042 48167105 46063298 46063297 46063360 63 ATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.:::....:.....::..:x...:....:x...::.::x..:......:........:... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -9424310 -84806092 +3237 chr4 + 190214555 38749282 38749281 38749380 99 AAGAAATCAAATAAACAAATAGATATAATAATATTATAACATCTAGTTTTAATTAAAACACAAAATTAAACATAA-----CATTTACTTTGGTCAGTTTTAAGA chr4 - 94230402 61067778 61067777 61067878 33162525 33162524 33162625 101 AAGGAAACAAATAAACAAACAAAAAAAATCAAGCTAGGATACCAAGTTCTAACTCAAAAACAAAAACAAACAAAAAAAACCAT---CTCTGAGTTGTTTCAAGA ...:..x............:.:.x.x...x.x::..x:.:.:.x....:...:.x...x......x:.....x..-----...---..:..:x:x....:.... 75M5I3M3D18M 68/96 70.8% 101/94230402 0.0% 8/96 8.3% -22318496 -71911906 +58578 chr4 + 190214555 38773223 38773222 38775630 2408 TCTGCAGTTCATACATTTCTCTGGTGGCTAATACATTAACATTAATAGCAGCTCGAAGGTTTGCCCAGAAAAGCCCACATTTACGCCTATCCTTGGGCCATTCCAAGTATGCTTTTTTTTCCAGGAGAGCTTTCAGTTTATGATACCTGGTGGGAATGCAATAGAATGGAATGGGTTCCAGTAAGATAAGAATTATATGATCAGAATTTTCATGGAAGAGATTGTGGTGGGCAAAGTAGAATTCATAATGGCACCACTCATTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTATAGCTTTTCTCAATGAAGCTTACAATATTTTCACTAATGCTTTTGCCAGGGTCAAAGTAGCTTTCATAAAGGCAAATCAAGATAGAACCATCTTCCTTCTCTAGATTGGGGATCAATTCATTCTTCACCCACAGAGAATCATGTTCACTGTATGAAATAAATGCGTGGAATCGGACA----TTTCTCTTGAGTTGTTCTTGGGTTGTT--TTCCTAACCCTGTGCCATGTTTGTGTGCATTGACCTAGCATCCTGAGATACCAGGGCAGATCAAAGTGGAGACAGCAGAAGGCCACAGCCAACCCCAGAACTAGCATAATAACCACAATGGTGACAATCAACAGAGCTGTGTTGCAAGATAATTCGTGGAGATGAACGTCTTTTAACCTAGTTCCCCTTAGGTTTAAAGGGTATTCACAGGTGTATGAATCTGACCATCCAACCATCATGACCTCTGAATATGTTTCAAGCTGAATGAAATTTTTTAATTCACAGGTACACCGGAATGGATTTCTTCCCGCATTTAGAGTTTTAACTTCCTGGCAGCTCTGAACAAAATCCAGAGATGGGCTGAGAATGAAGTTCATTTCAATGTTCAGAACTGAAAGTCTACTGAAATGACTGCATCCAGGGAGATCAGTTAGAAAATTAAATGCAATATTTAGTTCTCGTAAGGCCATCAGATGAATAGTCTCTTTAGGTACAGTTTGGATTTGGTTATTATTTAGGTCAAGTATTTGAATACTTTTGGGCAAGCACCTGAAGACAGAATCAGACAATTTATTGTATGACAGATTCATATTGACCACAGTTTCTGGCCATGAGCAATTTTCATCATTTTTA-TGTT--GTAATAGATTTTGACTCAGATCCAAGTGTTCCAAGGGT---GTGTTGTTAGCAAAGCAACTTACTAAAGAAAGTGTCTCCAGTTTATTGCCATTCAAAATGAGAGTTTTCAAGTGAGGCAGTTGGATAGTTCTTTTAAACAACTCGTCTGTTAAGATATTATTGGCAAAATTTAAATATTGGAAT----TTCGTAGGATAATTCGGGAAAAGCATGTGTGGCATTTGTGCATTTGATATTGTCAGGTTTTCTATGTCCATTTTGGTCAAAAGCAAATAGATTTTATCCTGTTGAATGTAAAACACTCTGAAATGTACATGCTCCAATTTTATAGTTCTCAT-------------TACAGTATTT------GAGTAGTCAAATGAA--------TTGTGGTCAAGATAAGCCTTACCACC--------AAAAGTCACATTTCGGATCTGAAAGTGTTCCACTGATGTATGCCAAACAAATTGTAAGATAAGGAAAAGGTCGTCCCAGAGTAAATCAACTTTATTAAGCAATAGAACCGATGTCTTAGCATT-TTCTAAA---CTAA------------GATTTCGTTGCATTTCATAACTTACAAATTGGCTTTTGCCATCTATATTTGTCATTTCTAATATTTTTGAAGTCTTGATTCCATCACGCAAAAG---AACCCAGAAATTTGTGTCCATTGGTAAAACAATGTGCAGTTTTGTTGTGTTTAAGATGGGCAGGCTACCTTCTTCATAATGAGGAAGAGTTCTGAATCCTAAGAAGACAGTATTTAGATGCAGATGAGCAATTTTCTGGAAATCTGATTTTTGTATTTTTGCCCCACTCAAACCTAGGATTTCCAGGTGTGACATGTTGCCAGCTTCCTCACAGATAGGCATGGTGTCAAAGTCATTAAAAGAAAGATCTAAATACCTGAGACCTGCCAGTAAATACCAAGTTACACTCTTCAGTCTGTTATT---AGACAAATCTAAATATCTTAACTCCTTGTTGAATTCAAAGGTTTTGAGATCCAGCTGTTGAATTCTGTTATGGCATAGAATCAAAACTCTCAGTTTGGAGACAGAATGAAAATCTGAACTCTGGAGTTG-AAAAAGGAGGTTATAGGATAAATCCA--GTGTCGTTGTGG-CTGGGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGT-TGGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCAGCTCTGGAGCATCACCCTCTGCTGTCATAACAATACTACAAAATATGTAAATGTTTCTGATGAGTCTCATTGTATTTCCAAGGATTTTACCACTTATTTCCTCATATGAA chr4 - 94230402 22664400 22664399 22666845 71563558 71563557 71566003 2446 TTTGCTCCTCATCTGTTTCAAAGGATGTCGGCAGCTTAATGTTAACAACTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGAAGGGATCGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAATTCTCACTAAACAACCTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGC------TCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCACCACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTCGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTCAAGCTGCGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGCCGGACAGCTTGCCCCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGCAGCTCACACGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCAGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCTCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACATTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGACAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTCTCAAATTTATTCCTATGCAAAATAAGTATTTTCAAATTTGCCAGAGTGTCACAATTCTGGAACAATTCGTCTGTCAGGGCATTGCGGGAAAAATTTATATACTGAAATGAGCTTCGT----TTTTTTGGGCAAAGCATGTGCGGCATACATGCATCATGTATTGTCAAACTATCAATATTCATCTCTGAAAACTGTCTGTACAAAATCTCCTGGTTGAAATAATACAACTTATTTCGAACACGCTCCAAAGTTAGTGCCTTCATGGAGCTACCCAAGGACAGTAATTGTTCCAGAGATCTTAAAAGGGGTACATGTTTATATTCA--GTCAGCTCCACCACTGGTCCCCGAAAAATCAAATTTCTCACAGTTAAGTGCTCCACAGATGAATCCCAAACTAGCAGAAAAATTTGCAGAATGACAGTCCATTCTAAGTCCACAGTGTCAAGCGTTAGATCTGTTGTTTTGATTTTCTTCTGAAGCTCTAAAGAAGGGGAGGGAAAATCTTTGTGGCTCAAGGTATAT----------------CTTAAATTAACTATTTTTAACTTTTCTGAAGTGCTCATTCCATCATATAAGAGGGAAAAATTGAAGTTTTGGTTTGTTGCAAAAACAATGTGAAGGCTCCGTGTATTTAAAGCTGTCAGACTTAGAGGCTCATACAGAGAAAAGTCTTCTAAGGTTAGGAAGACCGTGTCCAGCTGCAAATGTGCCACATATCTGAAGTCTGACCTTCGTATCATCATGGCACTTAATCCTAGATATTCTAAATGGAACATGATCCCAAATTCCTGACAGATTGGCAAGACAGTAAACTTGTTGAAAGAAAGATCTAAATGTCGAAGACGTGCAAGCAATTGGCAG--TAAGCTGTCCAA-ATGTTATTGTGAGATAAATCTAAGTATTCTAAATCTTGATTAAACATGAAGGCACTAAAGTCAAGCTCTGTAATTAGATTATGAGAAAGGTTTAATACTTGAAGGTCAGAAAGAGAA-GTAAATCTGAAGTTAGTAATTTCAGAGATGCTATTATGTGATAAATCTAATATGTGAGTATGGACTGGAAT---GTTTTTTGGAACTTCAGTTAGTAA-ATGTCCTGAATAGTTTGCAGTGATTTTATTTTCCACAGTTGGCTGGATATTATTCCAAAGTATGGATAAAAACACACAAGCAAAAACGTAGATACTTGTAAGGGATCCCATTATGTGTCTCAGAATTTT----CTTGGTTCTTCAGAGAAA .:...xx:....x::....xxx..xx.:::::.xx....::....:.:.x..:.xx.....x...........xx..:::..:.x...x.....x.....:....:...:.:.:.:...x...x......:.....:..:..:.....x.::..:..:xx:..x:.x..:..x..:.....:.....x..:....x::x:.::.....:...:x:..x.:x:....:...........x.::..:..:..:........::....x...........x.....x..............:.....:.........x..:.x.::..:..:..xx:................x:.....xx..:....:xx.:..x.x.x:...:x.:..x..::.......:.:...........::.................:.....::....:.....x.....:..x........::.x.x.----....:.x:------.:..:...x::x.--.x..x.:.:..x:x.:x:..:..:..x..:..x.x:.......xx.x:.....x....x...x.:..:..x:..xx::........x:.x:x.x....x..:..x:.x.xx.x..x.::x..x....x..:.....::..........x:.::...xxx.::..:.x...:.:x.:.:xx.....x..:.:..:.xxx.....:.::..x::...:.xx....:...x..::x..x.x..x..:.x..x.::x.:..x..x:.x.x...:.::.x:.::.....x.x....:x...:..:...:x:..x..x.x:..xx::..x..x::.x.....x...x..x:..:..x:x.......x....:..x..:...x.:..x........:.::xxx..x.:xx.:..:xxx.....:..x..x..:..:.::..xx::..::....x.x:..:..:..::.:..x.xxxx...x.x.:.::..:.:..:..x...x.xxx:..:.....:..x.x......x.x.x.x.x:...:.xx:x.........:::..x....xx..x.x..::.x:...x.x.....:.:..xx.:x:...x..xx..x.x...:x::..::x::.x...x:.:..-....--.:.::.::..x:x:....x:....::.::::..:x.:.---:.::x.:.:.:x.x.x.:..:..:xx:.....xx....x.:......x.:..x......:..x:.......:.xx.x...xxx.x:.xxx:.:.x:.....:........:.:.::...::x..x........x...:..:...----.....----.xx..:...x..........:.....x::.....:xx:........:::.x..x..:.:...:.:x.xx..xx.:xx:..x.xxx.x.....x.x:.x:...x...x::.:xxx:.x...:.......xx...xx.:::....-------------x......x..------...xxx.:...x.::--------..:.:x...--:.x...:::.....:--------....:...x.....xx.:xxxx.....:.....x....x..x......x.::x.x..:..xx.x.:..x.x.:x:...xxx...:..x..xx.:.:....:x....x.:.x...:..:::x..-....:..---....------------:.xx..x...::x:...x:::x..:----------------::..x...x:::....:...:x...:......x:.x.........:::..:..---..xx:x...:...xx..:::...xx...........x..x:.:xx...:.....:::x.x...:..xxxxxx:.....xx...:..::x:.::x..xx:..:......x..:.::..x....:...x..x.:x.x::x...:.....::..:....:x.:::xx....:..x.....:xx...:.::..x:.....x.x...:x.....x......x....x.:::x:...x.::..:................::.x:....x...x..:..x.:x..:--..x:..x.:..:-x.......---...:........:...::...x..:.x:..:..:x::....:x:.:.::..x....x.xx....xx:.....:x.x..:x.:..x...:xx..x.::..:.x....-.x.........x.:x.x.:..x-.:.:.x.xx:....:x........:.--:...x:x.:...-....::.---..:.x:x.....:.:xx....x:.-....-:x..::....x.:x:.x.x..:x:....:x.x.x::...xx:x.x:..:x.xxxx.::x.x:.x..xx.:..x.xx...x.:...:..::..x.:.x.::..:....:.:.x..:x..:.....----...:x...:...x.x:.. 476M4I8M6D13M2I633M1I4M2I38M3I144M4I5M4D143M13I10M6I15M8I9M2D15M8I123M1I7M3I4M12I25M16D53M3I280M2D12M1D8M3I106M1D22M1I26M2I12M1I7M3D24M1D4M1I124M4D18M 1474/2368 62.2% 2446/94230402 0.0% 118/2368 5.0% 16108823 NA +43063 chr4 + 190214555 38773250 38773249 38774968 1719 CTAATACATTAACATTAATAGCAGCTCGAAGGTTTGCCCAGAAAAGCCCACATTTACGCCTATCCTTGGGCCATTCCAAGTATGCTTTTTTTTCCAGGAGAGCTTTCAGTTTATGATACCTGGTGGGAATGCAATAGAATGGAATGGGTTCCAGTAAGATAAGAATTATATGATCAGAATTTTCATGGAAGAGATTGTGGTGGGCAAAGTAGAATTCATAATGGCACCACTCATTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTATAGCTTTTCTCAATGAAGCTTACAATATTTTCACTAATGCTTTTGCCAGGGTCAAAGTAGCTTTCATAAAGGCAAATCAAGATAGAACCATCTTCCTTCTCTAGATTGGGGATCAATTCATTCTTCACCCACAGAGAATCATGTTCACTGTATGAAATAAATGCGTGGAATCGGACA----TTTCTCTTGAGTTGTTCTTGGGTTGTT--TTCCTAACCCTGTGCCATGTTTGTGTGCATTGACCTAGCATCCTGAGATACCAGGGCAGATCAAAGTGGAGACAGCAGAAGGCCACAGCCAACCCCAGAACTAGCATAATAACCACAATGGTGACAATCAACAGAGCTGTGTTGCAAGATAATTCGTGGAGATGAACGTCTTTTAACCTAGTTCCCCTTAGGTTTAAAGGGTATTCACAGGTGTATGAATCTGACCATCCAACCATCATGACCTCTGAATATGTTTCAAGCTGAATGAAATTTTTTAATTCACAGGTACACCGGAATGGATTTCTTCCCGCATTTAGAGTTTTAACTTCCTGGCAGCTCTGAACAAAATCCAGAGATGGGCTGAGAATGAAGTTCATTTCAATGTTCAGAACTGAAAGTCTACTGAAATGACTGCATCCAGGGAGATCAGTTAGAAAATTAAATGCAATATTTAGTTCTCGTAAGGCCATCAGATGAATAGTCTCTTTAGGTACAGTTTGGATTTGGTTATTATTTAGGTCAAGTATTTGAATACTTTTGGGCAAGCACCTGAAGACAGAATCAGACAATTTATTGTATGACAGATTCATATTGACCACAGTTTCTGGCCATGAGCAATTTTCATCATTTTTA-TGTT--GTAATAGATTTTGACTCAGATCCAAGTGTTCCAAGGGT---GTGTTGTTAGCAAAGCAACTTACTAAAGAAAGTGTCTCCAGTTTATTGCCATTCAAAATGAGAGTTTTCAAGTGAGGCAGTTGG--ATAGTTCTTTTAAACAACTCGTCTGTTAAGATATTATTGGCAAAATTTAAATATT-----GGAATTTCGTAGGATAATTCGGGAAAAGCATGTGTGGCATTTGTGCATTTGATATTGTCAGGTTTTCTATGTCCATTTTGGTCAAAAGCAAATAGATTTTATCCTGTTGAATGTAAAACACTCTGAAATGTACATGCTCCAATTTTATAGTTCTCATTACAGTATTTGAGTAGTCAAATGAATTGTGGTCAAGATAAGCCTTACCACCAAAAGTCACATTTCGGATCTGAAAGTGTTCCACTGATGTATGCCAAACAAATTGTAAGATAAGGAAAAGGTCGTCCCAGAGTAAATCAACT------TTATTAAGCAATAGAACCGATGTCTT--AGCATTTTCTAAACTAAGATTTCGTTGCATTTCATAACTTACAAATTGGCTT---TTGCCATCT---ATATTTGTCATTTCTAATATTTTTGAAGTCTTGATTCCATCAC chr4 - 94230402 22675355 22675354 22677068 71553335 71553334 71555048 1714 CTGATAGATTGATGCTAATAGCTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGGAGGGATTGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAGTTCTCACTAAACAACTTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGC------TCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCACCACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTTGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTTCAGCTGTGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGCCGGACAGCTTGCCCCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGCAGCTCACATGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCGGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCCCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACACTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGGCAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTTTCAAATTTATTCCTATGCAAAATAAATGTCTCCAGTTGAATTAGTTTGTCACAGTTC--TGAAATAGCAGATCTGTTAAATCATTCTTTGAGAAATTTATATATCTAAGGGGACTGTCAGATGA-----AGGACACAGCATATGAATTAACTCAGATTCAGCTATTGTCAAGGCTGCAATATTCATGTTTGCAAATATGTTATAAATGTCATCCTGTGAAAAGTAGAGATCTGTGATTAAAACCTTATTCACTGCAAATGCTTTCATGGATGTTTTTGAATAGTCGAAGCGA--GTACTTACGACGTTCCCCAGT----TGTGTTAAGTTGTTGATATTGAAGTATTCAATGGATGAGTGCCATACAACCTGAAGTACTTTAATAATATCTTTCCAG------TCCACTGACATATTTGTCAGTGTCAGATTTCGTAGCCTGGAGCCTTTTCTAAATTTAGATAGTA-----------AAGTTATTAATTTTCTTACATTGTCATCTGCGATTTCTGACAATGATAGGCTTTCCGTAGTATT--TTCTATCAC ..:...x...:.:::.......x..:.xx.....x...........xx..:::..:.x...x.....x.....:....:...:.:.:.:...x...x......:.....:..:..:.....x.::..:..:xx:..x::x..:..x..:.....:.....x..:....x::x:.::..:..:...:x:..x.:x.....:...........x.::..:..:..:........::....x...........x.....x..............:.....:.........x..:.x.::..:..:..xx:................x:.....xx..:....:xx.:..x.x.x:...:x.:..x..::.......:.:...........::.................:.....::....:.....x.....:..x........::.x.x.----....:.x:------.:..:...x::x.--.x..x.:.:..x:x.:x:..:..:..x..:..x.x:.......xx.x:.....x....x...x.:..:..x:..xx::........x:.x:x.x....x..:..x:.x.xx.x..x.::x..x....x..:.....:...........x:.::...xxx.::..:.x...:..:.:.:xx.....x..:.:..:.xxx.....:.::..x::...:.xx....:...x..::x..x.x..x..:.x..x.::x.:..x..x:.x.x...:.::.x:.::.....x.x....:x...:..:...:x:..x..x.x:..xx::..x..x::.x.....x...x..x:..:..x:x.......x....:..x..:...x.:..x........:.::xxx..x.:xx.:..:xxx.....:..x..x..:..:.::..xx::..::....x.x:..:..:..::.:..x.xxxx...x.x.:.::..:.:..:..x...x.xxx:..:.....:..x.x......x.x.x.x.x:...:.xx:x.........:::..x....xx..x.x..::.x:...x.x.....:.:..xx.:x:...x..xx..x.x...:x:...::x::.x...x:.:..-....--.:.::.::..x:x:....x:....::.::::..:x.:.---:.::x.:.:.:x.x.x.:..:..:xx:.....xx.:..x.:......x.:..x......:.:x..:.:..:x...:x:....x.--.:.....--.x...:.:.xx:........:x:...x..x.x:.......x....:-----...x.x..:x.x..-----x..:x.x.....:..x:x:.x:.xx.xx.:x.x........:.x:.x.x..:.:...x..x.:x..x.xxxx...:..x.:.......x:..x...:.:xx..x...xxx:x..x.xx.:..x.x:x.xx.:.:....x:xx..x.....:.....:..xx:.--..:x.:.x..::xx..::.x:----x:x..:.x:..x:x...x.x:....:...x.:x....x:.....x....x:..x.:x.:xxx:.x..x:..x.:....------..x...------..xx.x..::x:...x::x:.:x.:.--...x.........:.x....xx::-----------..x...:x....xx...---...:.....---..x.:..x..x.xx..:xx...::.x...x..--...:..... 449M4I8M6D13M2I633M1I4M2I38M3I84M2I7M2D46M5I14M5D163M2D21M4D78M6D6M6I26M2I24M11D17M3I9M3I32M2D9M 1053/1681 62.6% 1714/94230402 0.0% 71/1681 4.2% 16097895 NA +9510 chr4 + 190214555 38773264 38773263 38773779 516 TTAATAGCAGCTCGAAGGTTTGCCCAGAAAAGCCCACATTTACGCCTATCCTTGGGCCATTCCAAGTATGCTTTTTTTTCCAGGAGAGCTTTCAGTTTATGATACCTGGTGGGAATGCAATAGAATGGAATGGGTTCCAGTAAGATAAGAATTATATGATCAGAATTTTCATGGAAGAGATTGTGGTGGGCAAAGTAGAATTCATAATGGCACCACTCATTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTATAGCTTTTCTCAATGAAGCTTACAATATTTTCACTAATGCTTTTGCCAGGGTCAAAGTAGCTTTCATAAAGGCAAATCAAGATAGAACCATCTTCCTTCTCTAGATTGGGGATCAATTCATTCTTCACCCACAGAGAATCATGTTCACTGTATGAAATAAATGCGTGGAATCGGACATTTCTCTTGAGTTGTT-CTTGGGTTGTTTTCCTAACCCTGTGCCATGTTTGTGTGCATTGACCTAGCATCCTGAGATACCAG chr4 - 94230402 73122354 73122353 73122857 21107546 21107545 21108049 504 TTCAAGGCTGCTTTCAAGTTTTCCCAAAACATCTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTAGCAGATGTCTTTCGTGGGGGCTCGCTTGGGCT-TCCGCTTGGCTTGGAGCCATGCCCAGGT------------CATTCTCATGTACCAG ..x.x:..x...:xx.:....x....:..x.x.:xx::..xx:x:::...xxx:.....:....:...x.::..xx.x.:..xx.xxx:::x......::::x....xx....:..xxxx.:.xx:x.......:.....:.:...:..:..:::xxx...:xx:..:..:.x:..:..::x:x:...x.x:..:.xx.::.....x.x.........::....x.......xxxxx..:.:x.......xx.x...:.:...:.........:..::x.::..:..x..xx:...x.x:..x.....xx......xx.x:.:..::.....x.x.xx:.x:.::xx.:x.x...x...:..x.xxx.x.:..xxx::..:.:......xxx:..:..:.x:........x..:.:...x....x.x.x.:..::.:.:..x..:.xxx.:-......:.-.::x.:.::.::x.x......::::x..------------...:..x.x:...... 451M1I8M1D28M12D16M 288/503 57.3% 504/94230402 0.0% 14/503 2.8% -34349090 -59881312 +9632 chr4 + 190214555 38773264 38773263 38773779 516 TTAATAGCAGCTCGAAGGTTTGCCCAGAAAAGCCCACATTTACGCCTATCCTTGGGCCATTCCAAGTATGCTTTTTTTTCCAGGAGAGCTTTCAGTTTATGATACCTGGTGGGAATGCAATAGAATGGAATGGGTTCCAGTAAGATAAGAATTATATGATCAGAATTTTCATGGAAGAGATTGTGGTGGGCAAAGTAGAATTCATAATGGCACCACTCATTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTATAGCTTTTCTCAATGAAGCTTACAATATTTTCACTAATGCTTTTGCCAGGGTCAAAGTAGCTTTCATAAAGGCAAATCAAGATAGAACCATCTTCCTTCTCTAGATTGGGGATCAATTCATTCTTCACCCACAGAGAATCATGTTCACTGTATGAAATAAATGCGTGGAATCGGACATTTCTCTTGAGTTGTT-CTTGGGTTGTTTTCCTAACCCTGTGCCATGTTTGTGTGCATTGACCTAGCATCCTGAGATACCAG chr4 - 94230402 73114474 73114473 73114977 21115426 21115425 21115929 504 TTTAGAGCTGCTTTCAAGTTTTCCCAAAACATCTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTAGCAGATGTCTTTCGTGGGGGCTCGCTTGGGCT-TCCGCTTGGCTTGGAGCCATGCCCAGGT------------CATTCTCATGTACCAG ..x.x...x...:xx.:....x....:..x.x.:xx::..xx:x:::...xxx:.....:....:...x.::..xx.x.:..xx.xxx:::x......::::x....xx....:..xxxx.:.xx:x.......:.....:.:...:..:..:::xxx...:xx:..:..:.x:..:..::x:x:...x.x:..:.xx.::.....x.x.........::....x.......xxxxx..:.:x.......xx.x...:.:...:.........:..::x.::..:..x..xx:...x.x:..x.....xx......xx.x:.:..::.....x.x.xx:.x:.::xx.:x.x...x...:..x.xxx.x.:..xxx::..:.:......xxx:..:..:.x:........x..:.:...x....x.x.x.:..::.:.:..x..:.xxx.:-......:.-.::x.:.::.::x.x......::::x..------------...:..x.x:...... 451M1I8M1D28M12D16M 289/503 57.5% 504/94230402 0.0% 14/503 2.8% -34341210 -59889192 +5345 chr4 + 190214555 38776242 38776241 38776461 220 TTCCAGGTGTGACATGTTGCCAGCTTCTCCACAGATAGGCATGGTGTTAG--TCATTAAAAGAAAGATCTAAATGTCTGAAACCTGCCAGTGAATACCAAGCCACAATCTTCAGTCTGTTGTTAGACAACTATAAATGTCTTAACTTCTTGTTGAATTCAAAGGTCTTGATATTCAGCTGCTGAATTCTGTTATGGCATAGAATCAAAGCTTTCAGGTTAGA chr4 - 94230402 22666375 22666374 22666596 71563807 71563806 71564028 222 TTCTAAATGGAACATGATCCCAAATTCCTGACAGATTGGCAAGACAGTAAACTTGTTGAAAGAAAGATCTAAATGTCGAAGACGTGCAAGCAATTGGCAGTAAGCTGTCCAAATGTTATTGTGAGATAAATCTAAGTATTCTAAATCTTGATTAAACATGAAGGCACTAAAGTCAAGCTCTGTAATTAGATTATGAGAAAGGTTTAATACTTGAAGGTCAGA ...:.::..x:.....x.x...:x...::x......x....x.:::x..:--.::..:...................x:.:..x...x..::.x.:x..:xxx:.x:..:xx.xx:.:....x...:..x.x...:.:.::...x.::.x:..:..:x::....:x:.:.x:.:x....x:xx....xx:.....:x.x..:x.:..x:...xx....:... 50M2I170M 130/220 59.1% 222/94230402 0.0% 2/220 0.9% 16109867 NA +3072 chr4 + 190214555 38777559 38777558 38777761 203 AAAGGGCTAATACCCAGAATCTATAAAGAACATTAAAAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGTGAAGGATATGAA-----CAGGCACTTCTCAAAA---------------GAAGACATTTATGCAGCCAACAAACATATGAAAAAAAGCTCATGATC--------ACTGGTCATTAGAGAAATGCAAATCAAAACCACA-----------ATGAGATACCATCTCATG chr4 - 94230402 37786551 37786550 37786783 56443620 56443619 56443852 233 AAAAAGCAAAGTTTTAGAACTTAGAAAAGTTGTTTTAGAATTTAGAAAAAAAAAAAAACCAACACAAAAAGCAGGTAATGGATAAGAAATTAGCATGGTTTCACCTAAATTCTGTCAGTGGCATGAATACATTTAT---GCCAATTGATACAAAACAAGCCATTCACAGCCTTGGAGGAGTTAGTTAT------AATGCATAACAAAATTACACATATTAGCTTATGAAATGTTATTTCATG ...::..x..xx:::....::..x...::x::..xx.:......x..:.......x....xxxx.......::...:.x.....x...-----..x.xx:.:x:.x...---------------...x........---.....:x:.:.:.x:.x..:xx::...::::.--------::.:..:..------......x.x.....::...-----------....:..:::..:..... 88M5I16M15I12M3D32M8I9M6D19M11I18M 124/194 63.9% 233/94230402 0.0% 48/194 24.7% 991008 NA +47955 chr4 + 190214555 38796423 38796422 38798224 1802 AAAAGCAGCAATATCAACAGGAGGAATATTTTTCACTTGATGTGTAATCTATT-TCTTTGCTTGCT-CTGTCAGCTTAATATTAATGGCTGCCCTTAAGTTAGCCCAAAAAAGGCCACGTTTGCTCTTTTCCTTGGGCCATTCCAAATAAGTCCTCCTGGCCATGAGACTTTTGAGCTTGTGATAACTGCTAGGAATGGAGTACTGCGGAATGGGTTCCAGCAAGATCAGGATTAAGCTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAGTAGAGTTCATAATGGCACCATTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGGTGATGATATTTTCCACAATGCTCTTGCCAGGAACAAAGTTTCTCTCATGAAGGCAAATCTGCATAC------CTTCTTTCTCTAGGTTTGGCAATAATTCATTCTTCACCCAGAAAGAATCGTGCCCACTATATGAAATAAATGCATGAAACTGGAGATTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGGGTCTGGGTCCACTGGCACACCATCCTGAGATACCAGGGCAGATCCAAGTAGCTGCAGAGGGAGGTCACAGTCACAGCCAACACCAGCATGGT-GGCAACGATG--GTGACGATCAGCAGAGTTATGTTGCAGGATAATTCAGACATGTGAAAGTCCTTTAGTAGGGTTCCTCTATAACTTTCCGGGTAGTCACACTTATAAGAATCAGGCCAGCCCTCTAACA-CTTCACTTGATACTTGGTCTATATTTTTGACAAATTCTCCTAGCTCACAGGTACATTGGAATGGATTGTCCCCTGCTTTTATTGACCTCATCTTCTGGCAGCTCTGGAAGAAATCAGCCGATGGGTGGGAAACTGAATTGTGATCAATGATCAATACAGAAAGGCTGCTAAAGCTGCCACATCCAGGAAGGTCAGTTAAAGAATTGAAAGCAACATTGAGTTCTTGCAAAGCTTCCAGTTTTACGACTTGTTTAGGAATGCTCTTTATTTTATTGCTGTGAAGATCAAGTACCTTGATCCTGGGAGGTAAACATCTGAAAATAGTGTCAGTAAGTATATTTGAAGACATATTTAAACTTAATAAACTTTTAGTCCAAGAACAGTCTCCTTTCTTTTCATCATAGCTTACAGAATTCTGGCTAATATCCAATTGTTGCAGAGACTTCATCTGTGTAGTCATTTCAGCTATTTTTGAAAGTTCTTTTAATTGATTCATTTGTAAAATAAGTGTCTCCAACTCAGTAAGGTGCCCACAATTTTCAAAAACCGTGTCTGTTAAGAGATTATTGGAAAAATCCAAATGCAGGAACGGGCTAATTTTGGATGGGCAAAGCATGTGGACCATGCGTGTACCAGACACTGTGAAATTTTTGATGTTCATATTCGAAAAGATTTCATAGATATAACTTTGCGGAAAACCGAACACATCGCTGACAACTTGGTGTATAGACAAGGCCTTCAAGGAAGTGCCAGAATAATCAAA------ATCTCTGAAGTCCAGCTGACCCTGTAGCTTCACGT--TTGAAATTGAGAAATACCATACAGTTGTATGCCAAACCAGCTGGAGGATCCTAATGAAAGAATTCCAAGTTGTTTCAATGTTGTTTAAGGTAAGATTTGATAACTTTGGATTTGTTTGAAGTTTCGCCAGAATACTTAGGAAGTAAGAACATTTGTTATCTTCTAGCA-CACATTTGATATTAGATAGTTCCAGATTTGCTACAGTCTTGACTGACACATCCAAAATAAAAT chr4 - 94230402 22675288 22675287 22677082 71553321 71553320 71555115 1795 AGAAACTGCATTATAAAGACATTTAATATCTTTCATCACACTTCTGTTCTGTTCTGTTCGTCAGCCACTGATAGATTGATGCTAATAGCTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGGAGGGATTGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAGTTCTCACTAAACAACTTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGCTCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCAC---CACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTTGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTTCAGCTGTGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGC---CGGACAGCTTGCCCCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGC-AGCTCACATGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCGGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCCCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACACTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGGCAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTTTCAAATTTATTCCTATGCAAAATAAATGTCTCCAGTTGAATTAGTTTGTCACAGTTCTGAAATAGCAGATCTGTTAAATCATTCTTTGAGAAATTTATATATCTAAGGGGACTGTCAGATGAAGGACACAGCATATGAATTAACTCAGATTCAGCTATTGTCAAGGCTGCAATATTCATGTTTGCAAATATGTTATAAATGTCATCCTGTGAAAAGTAGAGATCTGTGATTAAAACCTTATTCACTGCAAATGCTTTCATGGATGTTTTTGAATAGTCGAAGCGAGTACTTACGACGTTC------CCCAGTTGTGTTAAGTTGTTGATATTGAAGTATTCAAT--GGATGAGTGCCATACAACCTGAAGTACTTTAATAATATCTTTCCAGTCCACTGACATATTTGTCAGTGTCAGATTTCGTAGCCTGGAGCCTTTTCTAA-------------ATTTAGATAGTAAAGTTATTAATTTTCTTACATTGTCATCTGCGATTTCTGACAATGATAGGCTTTCCGTAGTATTTTCTATCACAACCCAACCATAAT .:..:.x...x...x..x.x:xxx.....:.....::xx.:x.x.:x...:..-.x..:.::x..:-...x:..x..:..::....:........:.:.........:......x..:.:......:.:.....x.....:....::..x..:...:.x.........x::..x........:..x..xx:...:..::x...:x.x..:..x..:.......................:..:..x:::...:x...x.:x.................x..:..:..:..:.....:..:.....x...........x.....x.................:...............x.:.....:..:...........:........:.:......:........xx.:..x.x...x..:.------.::.:.....:.::..x..x.x:.::..............x.::......:.::.:..:..x.....:..x..:..:.....x...x:xx...xxx.:..:..x::.x:xx:..x..x:..:..x.x.:xx.....x........x....x.....xx.x:.....x....x.....:....x....x:.::...:...---........x..x..x..x...-:...:.::x.--..x..:.x..........:.......:.x:.::..:.x..x...:........:..:x.x.....x..xx.:::...:.....x.::...x::..x.xx..x.......---.x:...-...xx.::x.x...xxx...x:.xx:x:::x..:.:..x.-........x.x...:.x...:..:..x.x...x....x:.x:xx.:...:x:..x.....x...x:.....:..:..x......xx.:::.:::....x:xx..x...x...:x.:xxxx....:xx.....x:x.::..:..x..x.....:.::.:xx::...:.x..x.x:..x..:..:.....x.xx.x...:.:x::..:::x:..:..:.::..xx:x..:.x:...:.x..x..:..x.x.x:x.....x:.:.xx..:..:..::::..x.:..:x..x..x..:xx:..x..:....x:.::.:x::.:x:.:.xxx.:..:...xx::...:x:..:.:xx:.::.:::.x:.x:.xx:.:..x:x...x..:....:x.:::x...x..:.....x:.xx.:.....xxx:x::.::..x.....x::..:x....x....x.x..:.......:........::.x.:.x..x.xx:....:..:.x...x.x.:x:........:xx...x..x..:....::.x..::xx:.:x..:..:x:xxxx..x..:..x.....:..:.::.xx:xx.xx:...x:.:...x..:x:.x::..:.....:..:.x...x..x.:...:..:.x.:::..:.:...::x..:xx.xx:.x.x.x...:.x:.x:.:x.xx..x..:....x...x..x::x.....:..:..------.::.x:..x..:.------...x..x.:x.:.x..--....x.....::x..x.x..--:.x..x:.....x..x.x...:..x.:::....:.x.xxx.....:x::::.xxx..:..xx.:.:x..x......x:..:.:.x.::::.x..:x..-------------.:....:x.....::x:...x:..x....x:.x::-..:x.x:...x.:x..:.:.xx:..::..x.:::...x..xx..:x....x..x..x:.x... 53M1I12M1I357M6I199M3D21M1I10M2I109M3D6M1I40M1D722M6I13M6D16M2I20M2D98M13D35M1I63M 1103/1774 62.2% 1795/94230402 0.0% 49/1774 2.8% 16121135 NA +56083 chr4 + 190214555 38796492 38796491 38798828 2337 CAGCTTAATATTAATGGCTGCCCTTAAGTTAGCCCAAAAAAGGCCACGTTTGCTCTTTTCCTTGGGCCATTCCAAATAAGTCCTCCTGGCCATGAGACTTTTGAGCTTGTGATAACTGCTAGGAATGGAGTACTGCGGAATGGGTTCCAGCAAGATCAGGATTAAGCTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAGTAGAGTTCATAATGGCACCATTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGGTGATGATATTTTCCACAATGCTCTTGCCAGGAACAAAGTTTCTCTCATGAAGGCAAATCTGCATAC------CTTCTTTCTCTAGGTTTGGCAATAATTCATTCTTCACCCAGAAAGAATCGTGCCCACTATATGAAATAAATGCATGAAACTGGAGATTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGGGTCTGGGTCCACTGGCACACCATCCTGAGATACCAGGGCAGATCCAAGTAGCTGCAGAGGGAGGTCACAGTCACAGCCAACACCAGCATGGT-GGCAACGATG--GTGACGATCAGCAGAGTTATGTTGCAGGATAATTCAGACATGTGAAAGTCCTTTAGTAGGGTTCCTCTATAACTTTCCGGGTAGTCACACTTATAAGAATCAGGCCAGCCCTCTAACA-CTTCACTTGATACTTGGTCTATATTTTTGACAAATTCTCCTAGCTCACAGGTACATTGGAATGGATTGTCCCCTGCTTTTATTGACCTCATCTTCTGGCAGCTCTGGAAGAAATCAGCCGATGGGTGGGAAACTGAATTGTGATCAATGATCAATACAGAAAGGCTGCTAAAGCTGCCACATCCAGGAAGGTCAGTTAAAGAATTGAAAGCAACATTGAGTTCTTGCAAAGCTTCCAGTTTTACGACTTGTTTAGGAATGCTCTTTATTTTATTGCTGTGAAGATCAAGTACCTTGATCCTGGGAGGTAAACATCTGAAAATAGTGTCAGTAAGTATATTTGAAGACATATTTAAACTTAATAAACTTTTAGTCCAAGAACAGTCTCCTTTCTTTTCATCATAGCTTACAGAATTCTGGCTAATATCCAATTGTTGCAGAGACTTCATCTGTGTAGTCATTTCAGCTATTTTTGAAAGTTCTTTTAATTGATTCATTTGTAAAATAAGTGTCTCCAACTCAGTAAGGTGCCCACAATTTTCAAAAACCGTGTCTGTTAAGAGATTATTGGAAAAATCCAAATGCAGGAACGGGCTAATTTTGGATGGGCAAAGCATGTGGACCATGCGTGTACCAGACACTGTGAAATTTTTGATGTTCATATTCGAAAAGATTTCATAGATATAACTTTGCGGAAAACCGAACACATCGCTGACAACTTGGTGTATAGACAAGGCCTTCAAGGAAGTGCC--AGAATAATCAAAATCTCTGAAGTC----------------------------CAGCT---------GACCCTGTAGCTTCACGTTTGAAATTGAGAAATACCATACAGTTGTATGCCAAACCAGCTGGAGGAT---CCTAATGAAAG--AATTCCAAGTTGTTTCAATGTTGTTTAAGGTAAGATTTGATAACTTTGGATTTGTTTGAAGTTTCGCCAGAATACTTA------GGAAGTAAGAACATTTGTTATCTTCTAGCACACATTTGATATTAGATAGTTCCAGATTTGCTACAGTCTTGACTGACACATCCAAAAT---AAAATGGAATTCTTTGTTTGTGGGGAACACAATGTGCAGACTCTCAGTGTTAAAGTCTTGAAGGCCCTCAGGGTCTTCTTTTTCCCCATAAGTCTCTCCTAAGACCAGCAAGACCTTGCTGATATTCAAATGAGCAATTGGCAGCACACTAGATTTTTCTAAGTGTGTGGTGCTCAACCCCAGAAATTTTAGTTGAGACATATTGCCAAACTCTTTGCATATAGGCAGGGCATCAAATGCATTAAATGACAGGTCCAAGTGCTTGAGGTTCACAGTAGGGTGGCAAGAAATCTTCACCAACTTGTTGTGGGACAAATCCAAGTATTCCAATTCCTGGTTGAATTTGAAAACACTGATATCAAGATACTGGATTCTATTATGAGAAATTATCAAAATCCTCAGTTTTGACAGTGATAAGATGTCAGAAGTCCA-AAGCTCAGATATATAATTTTGCGATATATTTAAGATTGTTGTTTT--CTGGGATAGGTCTTTAGGAACGTGGATGAGACCGTTTTTTGACCTATCAACTAAAAATTCACTTTCTTCAGATAATTGTATTCTGATCTGAAGTATTAACATGAAGATAATGGCAAAATGGAAGATGCTAGT chr4 - 94230402 22664431 22664430 22666797 71563606 71563605 71565972 2367 CAGCTTAATGTTAACAACTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGAAGGGATCGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAATTCTCACTAAACAACCTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGCTCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCAC---CACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTCGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTCAAGCTGCGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGC---CGGACAGCTTGCCCCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGC-AGCTCACACGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCAGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCTCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACATTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGACAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTCTCAAATTTATTCCTATGCAAAATAAGTATTTTCAAATTTGCCAGAGTGTCACAATTCTGGAACAATTCGTCTGTCAGGGCATTGCGGGAAAAATTTATATACTGAAATGAGCTTCGTTTTTTTGGGCAAAGCATGTGCGGCATACATGCATCATGTATTGTCAAACTATCAATATTCATCTCTGAAAACTGTCTGTACAAAATCTCCTGGTTGAAATAATACAACTTATTTCGAACACGCTCCAAAGTTAGTGCCTTCATGGAGCTACCCAAGGACAGTAATTGTTCCAGAGATCTTAAAAGGGGTACATGTTTATATTCAGTCAGCTCCACCACTGGTCCCCGAAAAATCAAATTTCTCACAGTTAAGTGCTCCACAGATGAATCCCAAACTAGCAGAAAAATTTGCAGAATGACAGTCCATTCTAAG-----TCCACAGTGTCAAGCGTTAGATCTG------------TTGTTTTGATTTTCTTCTGAAGCTCTAAAGAAGGGGAGGGAAAATCTTTGTGG---CTCAAGGTATATCTTAAATTAACTATTTTTAACTTTTCTGAAGTGCTCATTCCATCATATAAGAGGGAAAAATTGAAGTTTTGGTTTGTTGCAAAAACAATGTGAAGGCTCCGTGTATTTAAAGCTGTCAGACTTAGAGGCTC------ATACAGAGAAAAGTCTTCTAAGGTTAGGAAGACCGTGTCCAGCTGCAAATGTGCCACATATCTGAAGTCTGACCTTCGTATCATCATGGCACTTAATCCTAGATATTCTAAATGGAACATGATCCCAAATTCCTGACAGATTGGCAAGACAGTAAACTTGTTGAAAGAAAGATCTAAATGTCGAAGACGTGCAAGCAATTGGCAGTAAGCTGTCCAAATGTTATTGTGAGATAAATCTAAGTATTCTAAATCTTGATTAAACATGAAGGCACTAAAGTCAAGCTCTGTAATTAGATTATGAGAAAGGTTTAATACTTGAAGGTCAGAAAGAGA-AGTAAATCTGAAGTTAGTAATTTCAGAGATGCTATTATGTGATAAATCTAATATGTGAGTATGGACTGGAAT--GTTTTTTGGAACTTCAGTTAGTAAATGTCCTGAATAGTTTGCAGTGATTTTATTTTCCACAGTTGGCTGGATATTATTCCAAAGTATGGATAAAAACACACAAGCAAAAACGTAGATACTTGT .........:....:::.......:.:.........:......x..:.:......:.:.....x.....:....::..x..:...:.x.........x::..x........:..x..xx:...:..::x...:x:x..:..x..:.......................:..:..x:::...:x...x.:x:................x..:..:..:..:.....:..:.....x...........x.....x.................:...............x.:.....:..:...........:........:.:......:........xx.:..x.x...x..:.------.::.:.....:.::..x..x.x:.::..............x.::......:.::.:..:..x.....:..x..:..:.....x...x:xx...xxx.:..:..x::.x:xx:..x..x:..:..x.x.:xx.....x........x....x.....xx.x:.....x....x.....:....x....x:.::...:...---........x..x..x..x...-:...:.::x.--..x..:.x.........::.......:.x:.::..:.x..x...:.......:x..:x.x.....x..xx.:::...:.....x.::...x::..x.xx..x.......---.x:...-...xx.::x.x...xxx...x:.xx:x:::x..:.:..x.-........x.x...:.x...:..:..x.x...x....x:.x:xx.:...:x:..x.....x...x:.....:.....x......xx.:::.:::....x:xx..x...x...:x.:xxxx....:xx.....x:x.::..:..x..x.....:.::.:xx::...:.x..x.x:..x..:..:.....x.xx.x...:.:x::..:::x:..:..:.:::.xx:x..:.x:...:.x..x..:..x.x.x:x.....x:.:.xx..:..:..::::..x.:..:x..x..x..:xx:..x..:....x:.::.:x::.:x:.:.xxx.:..:...xx:....:x:..:.:xx:.::.:::.x:.x:.xx:.:..x:x...x..:....:x.:::x...x..:.....x:.xx.:.....xxx:x::.::..x.....x:::.:x....x....x.x..:.........:.:.:...x.:x.:x..:xxx:.......:.x:..x.x:x:......:.:.:x...::x........::.x..:.x.:..:.:...xxx...xxx...............x:x...:.:..:.:..x::.:...x...:.x.::..:.....x.::.....xxx.:::..x.x.xxx:::..xxx:...:x:x...xx.:::.xxx...x:.x.x:.x..x:.:x.......x...:x.:..--..:.:.:.x.xx:.::.x..::..----------------------------.....---------.x...:.x.:xx...x:...xxx.:x.xx..:.:.:x:....x..x..x......:...x.:.::..---.xx.....x..--x....:...-----..x.::x...:x.:x..x....:..------------......x:.x....x:.x...xx::..------..:..x:.:..:x.....x:---:::.:x::.:..:.x.x....:x..x..::.:x...x..:x...x:.x.:.xxxx...x:..:.x---.....x...x.:..x......x.x:..x........x..:...:xx..:..x..:x..xxx..:.::xx...x..------x.x.xx.x..:xx...:.....:::..x......x..::x.xx.x......x..x.:xx::xxx.x:::x..::..:x..xxxx::...::..:..:..:...x...:..:x..::....:x.x.....:..:.x:..x..x....:.:..x:...:x::..:..x..x..:..:..:..::x:..::x::..:xx::x.....:x..:::x..xxx.xx..:.....:..:.....:........:..x..:..:..:..:x....::....:.x:.....x.x:xx:...xx...........xxx.:..x.:::xx..x.:x..x..x..-.:x.x:..x.....:x:-..x:.....x..::x...x..:....x..:...x..xxxx..x.x--....:..--..:...x.....x.x::.x..xxx:.x.::...x:x:.:x:.x:x:.x..:.:....:x...x.:::..x..x:.:x..::......x:.:.x:..x.:.xx:......xx.x....:..x.. 353M6I199M3D21M1I10M2I109M3D6M1I40M1D710M2I24M28I5M9I67M3I11M2I9M5D25M12D27M6I20M3D65M3I75M6D333M1D17M1I45M2I7M2D123M 1412/2301 61.4% 2367/94230402 0.0% 102/2301 4.4% 16132061 NA +11895 chr4 + 190214555 38796502 38796501 38797011 510 TTAATGGCTGCCCTTAAGTTAGCCCAAAAAAGGCCACGTTTGCTCTTT-TCCTTGGGCCATTCCAAATAAGTCCTCCTGGCCATGAGACTTTTGAGCTTGTGATAACTGCTAGGAATGGAGTACTGCGGAATGGGTTCCAGCAAGATCAGGATTAAGCTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAGTAGAGTTCATAATGGCACCATTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGGTGATGATATTTTCCACAATGCTCTTGCCAGGAACAAAGTTTCTCTCATGAAGGCAAATCT------GCATACCTTCTTTCTCTAGGTTTGGCAATAATTCATTCTTCACCCAGAAAGAATCGTGCCCACTATATGAAATAAATGCATGAAACTGGAGATTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGGGTCTGGGTCCACTGGCACACCATCCTGAGATACCAG chr4 - 94230402 73114474 73114473 73114977 21115426 21115425 21115929 504 TTTAGAGCTGCTTTCAAGTTTTCCCAAAACAT-CTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTA--GCAGATGTCTTTCG--------TGGGGGCTCG--CTTGGGCTTCCGCTTGGCTTGGAGCCATGCCCAGGTCATTCTCATGTACCAG ..x.x:.....::.:.....xx.......x.x-.::.xx........:-..xxx:.....:....::..:...:.xx..x:...x.xx:.::xx..:...:::x.x..x:.:..:..x.xx.:x:x.x.......:.......:...x.....::xxx:..::xxx:::..:.x...:..::x:x::..x.x:..:.xx..:.....x.x......:..:.....x.......xxxxx..:.:x.......xx.x.....::............x..x::.....:..x........x.x...x.....x.......::.x..:...:.....x.x.:------.x:x..x.x.:.x...:..x.x:x...x:.xxx::..:.:.......xx:..:....x.:....:..x..:.:...x..:.x:x.--.x....x.....x.--------.::...:x:.--.:...x.:.x...:x..::...:x...:xxx..x::...:..x.x:...... 32M1D15M1I289M6I85M2D14M8D10M2D52M 308/497 62.0% 504/94230402 0.0% 20/497 4.0% -34317972 -59912430 +12026 chr4 + 190214555 38796502 38796501 38797011 510 TTAATGGCTGCCCTTAAGTTAGCCCAAAAAAGGCCACGTTTGCTCTTT-TCCTTGGGCCATTCCAAATAAGTCCTCCTGGCCATGAGACTTTTGAGCTTGTGATAACTGCTAGGAATGGAGTACTGCGGAATGGGTTCCAGCAAGATCAGGATTAAGCTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAGTAGAGTTCATAATGGCACCATTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGGTGATGATATTTTCCACAATGCTCTTGCCAGGAACAAAGTTTCTCTCATGAAGGCAAATCT------GCATACCTTCTTTCTCTAGGTTTGGCAATAATTCATTCTTCACCCAGAAAGAATCGTGCCCACTATATGAAATAAATGCATGAAACTGGAGATTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGGGTCTGGGTCCACTGGCACACCATCCTGAGATACCAG chr4 - 94230402 73122354 73122353 73122857 21107546 21107545 21108049 504 TTCAAGGCTGCTTTCAAGTTTTCCCAAAACAT-CTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTA--GCAGATGTCTTTCG--------TGGGGGCTCG--CTTGGGCTTCCGCTTGGCTTGGAGCCATGCCCAGGTCATTCTCATGTACCAG ..x.x......::.:.....xx.......x.x-.::.xx........:-..xxx:.....:....::..:...:.xx..x:...x.xx:.::xx..:...:::x.x..x:.:..:..x.xx.:x:x.x.......:.......:...x.....::xxx:..::xxx:::..:.x...:..::x:x::..x.x:..:.xx..:.....x.x......:..:.....x.......xxxxx..:.:x.......xx.x.....::............x..x::.....:..x........x.x...x.....x.......::.x..:...:.....x.x.:------.x:x..x.x.:.x...:..x.x:x...x:.xxx::..:.:.......xx:..:....x.:....:..x..:.:...x..:.x:x.--.x....x.....x.--------.::...:x:.--.:...x.:.x...:x..::...:x...:xxx..x::...:..x.x:...... 32M1D15M1I289M6I85M2D14M8D10M2D52M 309/497 62.2% 504/94230402 0.0% 20/497 4.0% -34325852 -59904550 +3908 chr4 + 190214555 38824872 38824871 38824945 74 CTACAGCCTCTGTCTCCCAGGTTCAAGTGATTTTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........:xx:x..:.::..........x..:x.xx.x........::.:.........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 20627746 NA +48256 chr4 + 190214555 38827082 38827081 38828822 1741 TTTAAGATTTCACATCA-------------TTGTTTTCAGTGACTAGTGTTAATTTCATATTAAAAGCGGCTCTAATGTTAGCCCAAAAGAGCCCACGTTTGCTTTTCTCCTTGGGCCACTGCAAATAAGTCCGCTGCGTCATGAGAGCCTTCAGCTTGTGGTACTTGTTGGGAATGCTGTTCTGTGGAATGGGTTCCAGTAAGATGAGGATTAAGTTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAATAGAGTTCGTAATGGCACCACTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGTTGATGATATTTTCCACAATGCTCTTGCCAGGGACAAAGTTTCTCTCATGAAGACAAATCTGTATA------TCTTCTTTTTCTAGGTAAGGTACCAATTCACTTTTCACCCAGGCAGAATCATGTTCACTATATGAAATAAAAGCATGAAACTGGAGGTTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGAGTCTGGGTCCACTGGCACACCATCCTGAGATACCAGGGCAGATCCAAGTAGATGCAGAGGGAGGTCACAGTCACAGCCAACACCAGCATGGT-GGCACCGATG--GTGACGATCAGCAGAGTTATGTTGCAGGATAATTCAGACATGTGAAAGTCCTTTAGTGGGCTTCCTCTATAACTTTCTGGGTAGTCACACTTATAAGAATCAGGCCAGCCCTCTAACACTTCACTTGATACTTGGTCTATATTTTTG-----ACAAATTCTCTTAGCTCACAGGTACATTGGAATGGATTGTCCCCTGCTTTTATTGACCTCATCTTCTGGCAGCTCTGGAAGAAATCAGCCGATGGGTGGGAAACTGAATTGTGATCAATGATCAATACAGAAAGGCTGCTAAAGCTGCCACATCCAGGAAGGTCAGTTAAAGAATTGAAAGCAACATTGAGTTCTTGCAAAGCTTCCAGTTTTACGACTTGTTTAGGAACGCTCTTTATTTTATTGCTGTGAAGATCAAGTACCTTGATCCTGGGAGGTAAACATCTGAAAACAGAGTCAGTAAGCATATTTGAAGACAAATTTAACACCACTATACTCTCAACCCAAGTGCAGTTTTCTTTATGTCTACCAGATTCCAAAGAATTCCAGCTAACATCCAGTATTTCCAAAGAAGGCATATCCTTCGTCATGAGACCTACTTTGAAAAGGTCTTTTAATCCATTCTTTTGTAAGATAAGTGTCTCCAATTTAACTAACGTGGAACATTTTTCAAAAATACTATCTGTGAAAACGTTCTGGGTAAAGTTCAAAAACTTGAATGTGCTTGGTGCATG-AGGACACAGCATGTGTATAAAAGGTGTATCTGAAATGGTTAACATCATAATGTTCATCTCAGAAAACACGGTGTACAAAGCTGTCTGTGAAAACAGAAAAACTTGGTTCGTGATATGTTCTATTGTCAATGCTTTCAATGTCGTTTTAGAATAAGTAAAAT-CTTCTTCACGAATGCTTTCAATTATTGTTAAATTGTAAATATTGAGATATTCCACAGGTTTGGGCCAAAGAAATTGAAAGACTCTGACCAGGCATTTCCAAGTCGTTTCTATGTGGTTGAGGGTAAAATTCAGTAAGGTTGAACCTCTGGTGAGTTCTGATAA-AAATTTAATGAAAACTTGACAGTTGTCATCATTCAATTTAATATTAGTCAGTTGTAAGCACCCTAAAGTATT chr4 - 94230402 22675309 22675308 22677059 71553344 71553343 71555094 1751 TTTAATATCTTTCATCACACTTCTGTTCTGTTCTGTTCGTCAGCCACTGATAGATTGATGCTAATAGCTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGGAGGGATTGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAGTTCTCACTAAACAACTTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGCTCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCAC---CACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTTGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTTCAGCTGTGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGC---CGGACAGCTTGCC-----CCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGCAGCTCACATGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCGGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCCCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACACTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGGCAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTTTCAAATTTATTCCTATGCAAAATAAATGTCTCCAGTTGAATTAGTTTGTCACAGTTCTGAAATAGCAGATCTGTTAAATCATTCTTTGAGAAATTTATATATCT-AAGGGGACTGTCAGATGAAGGACACAGCATATGAATTAACTCAGATTCAGCTATTGTCAAGGCTGCAATATTCATGTTTGCAAATATGTTATAAATGTCATCCTGTGAAAAGTAGAGATCTGTGATTAAAACCTTATTCACTGCAAATGCTTTCATGGATGTTTTTGAATAGTCGAAGCGAGTACTTACG-ACGTTCCCCAGTTGTGTTAAGTTGTTGATATTGAAGTATTCAATGGATGAGTGCCATACAACCTGAAGTACTTTAATAATATCTTTCCAGTCCACTGACATATTTGTCAGTGTCAGATTTCGTAGCCTGGAGCCTTTTCTAAATTTAGATAGTAAAGTTATTAATTTTCTTACA-TTGTCATC------TGCGATTTCTGACAATGATAGGCTTTCCGTAGTATT .....x..:.:x.....-------------..x.x...:x:::.:.x..x..:x..x..::...x...x..:..x.x.........:..:..xx..:.:.....::.......x.......x..::..x..:.x..x:.:.........................:.xx::..:..:x:..x:x.x..:..x..:.....:.....x.........:.:..:..x:::...:x...x.:x..............:..x..:.....:..:........:.....x...........x.....x.................:.................:.....:..:...........:..........:......:........xx....x.x...x..:------..::.:..:..:.::.x:..x.:..::...:.:........x:x:.....::....:..:..x.....:..:..:..:.....x..:x:xx...xxx.:..:..x::.x:xx:..x..x:..:..x.x.:xx.....x........x....x.....xx.x:.....x....x.....:.........x:.::...:...---........x..x..x..x...-:...x.::x.--..x..:.x..........:.......:.x:.::..:.x..x...:........:..:x.xx....x..xx.:::.........x.::...x::..x.xx..x.......---.x:...x:.::.:-----.:::.x..::x.:.:::-----.x:..x..::x:........x.x...:.x...:..:..x.x...x....x:.x:xx.:...:x:..x.....x...x:.....:..:..x......xx.:::.:::....x:xx..x...x...:x.:xxxx....:xx.....x:x.::..:..x..x.....:.::.:xx::...:.x..x.x:..x..:..:.....x.xx.x...:.:x::..:::x:..:..:..:..xx:x..:.x:...:.x..x..:..x.x.x:x.....x:.:.xx..:..:..::::..x....xx..x..x...xx:..x..:....::.::.:.x.::.:.x.xxx...:....xxx....:x::.:.:.xx.....::xxx:x..:x:.:..x.x...x.::.....xxx:::..:x..xxx....:xx:.x.......::.::..:...:.....::..:x...::....:.x..:..:....:........:..x..:..::x..xx...x..:.x...x.xxxx......x...x.:....xx.x:..:..:.x.x.::.-..x.x.x:..x::x...-............:..x..x..xxxx.xx..x.xx..x..:..x:::::...:.....x.:x.x...:.:.x.:..x.x:x.xx:.........xx::.:.x..xx.x.::x:.:x.xx.::.:..:x..........xx.x:.....x.....:x::..::-xx.x:.:...-.:.:.::.x.x.xx......:....x:.......::.....x.::.:.xx.x....x.x..x:....:x...:.:.:x.x::x......:x:.::.xx:..:.xxx.x..x..x.:...:x...:xx.x..:...:.xx.:.:..:x....:-...x...x.:.xxx::.x...-........------.x::..x.:x.x..:.x:..:..x::.::x...... 17M13I372M6I200M3D21M1I10M2I109M3D13M5D17M5I557M1D17M1I161M1I10M1D152M1I21M1D8M6D36M 1084/1721 63.0% 1751/94230402 0.0% 50/1721 2.9% 16151773 NA +55713 chr4 + 190214555 38827089 38827088 38829448 2360 TTTCACATCATTGTTTTCAGTGACTAGTGTTAATTTCATATTAAAAGCGGCTCTAATGTTAGCCCAAAAGAGCCCACGTTTGCTTTTCTCCTTGGGCCACTGCAAATAAGTCCGCTGCGTCATGAGAGCCTTCAGCTTGTGGTACTTGTTGGGAATGCTGTTCTGTGGAATGGGTTCCAGTAAGATGAGGATTAAGTTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAATAGAGTTCGTAATGGCACCACTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGTTGATGATATTTTCCACAATGCTCTTGCCAGGGACAAAGTTTCTCTCATGAAGACAAATCTGTATA------TCTTCTTTTTCTAGGTAAGGTACCAATTCACTTTTCACCCAGGCAGAATCATGTTCACTATATGAAATAAAAGCATGAAACTGGAGGTTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGAGTCTGGGTCCACTGGCACACCATCCTGAGATACCAGGGCAGATCCAAGTAGATGCAGAGGGAGGTCACAGTCACAGCCAACACCAGCATGGT-GGCACCGATG--GTGACGATCAGCAGAGTTATGTTGCAGGATAATTCAGACATGTGAAAGTCCTTTAGTGGGCTTCCTCTATAACTTTCTGGGTAGTCACACTTATAAGAATCAGGCCAGCCCTCTAACACTTCACTTGATACTTGGTCTATATTTTTG-----ACAAATTCTCTTAGCTCACAGGTACATTGGAATGGATTGTCCCCTGCTTTTATTGACCTCATCTTCTGGCAGCTCTGGAAGAAATCAGCCGATGGGTGGGAAACTGAATTGTGATCAATGATCAATACAGAAAGGCTGCTAAAGCTGCCACATCCAGGAAGGTCAGTTAAAGAATTGAAAGCAACATTGAGTTCTTGCAAAGCTTCCAGTTTTACGACTTGTTTAGGAACGCTCTTTATTTTATTGCTGTGAAGATCAAGTACCTTGATCCTGGGAGGTAAACATCTGAAAACAGAGTCAGTAAGCATATTTGAAGACAAATTTAACACCACTATACTCTCAACCCAAGTGCAGTTTTCTTTATGTCTACCAGATTCCAAAGAATTCCAGCTAACATCCAGTATTTCCAAAGAAGGCATATCCTTCGTCATGAGACCTACTTTGAAAAGGTCTTTTAATCCATTCTTTTGTAAGATAAGTGTCTCCAATTTAACTAACGTGGAACATTTTTCAAAAATACTATCTGTGAAAACGTTCTGGGTAAAGTTCAAAAACTTGAATGTGCTTGGTGCATGAGGACACAGCATGTGTATAAAAGGTGTATCTGAAATGGTTAACATCATAATGTTCATCTCAGAAAACACGGTGTACAAAGCTGTCT-GTGAAAACAGAAAAACTTGGTTCGTGATATGTTCTATTGTCAATGCTTTCAATG-------------------TCGTTTTAGAATAAGTAAAA---------------------TCTTCTTCACGAATGCTTTCAATTATTGTTAAATTGTAAATATTGAGATATTCCACAGGTTTGGGCCAAAGAAATTGAAAGACTC------TGACCAGGCATTTCCAAGTCGTTTCTATGTGGTTGAGGGTAAAATTCAGTAAGGTTGAACCTCTGGTG-AGTTCTGATAAAAATTTAATGAAAACTTGACAGTTGTCATCATTCAATTTAATATTAGTCAGTTGTAAGCACCCTAAAGTATTAACTGATATGTTCACTTGGATAGCGAATAAA----------CTAGTTGGGTG-AAAAACAAGGTGAAGGGTTTTTGCATTCAGAATTTGTAGACTTTCTGTCTCATTTTCTTTTATATAATAATTTCTTAAATCCAGAAGGATATAACTTAGATGCAAGTGAGCAATTGGCAGCAAATCTAATTTTTGCAGCTTCATAGCACTCAATCCCAAGAAATTCAGTTGTGATAAGTTGCCAAATTCCTTACAGATGGGCAGGGCCTTGAAATCATTGAATGAGAGATCTAAATGCCTGAAACTCACAATAGGATGGCAGGATATCTTTTGCAACTGATTATGAGATAAATCCAAATATTCTAAATCCTGGTTGAACTTGAAAACACTTAAATCAAGTAGCTGGATTCTGTTATGGGAAAGTCTCAAAACTGTCAACTCTGATAGAAAGCTCATGTCAGAGACCTGAAG--------CTCAGCGATGTAGTTCTGAGACATATCTAAGACTTTGGTTTTCAGCGGTAGGTCTTTTGGAACATGAATAAGACCTCTTTTTGACTTGTCTACTGCAAATTCATTTCCGTCGGAGAACTGGATTCTGGTTCCAACTAT---TATGATCATAAGGCAAACAAAA---TGGAAGCTTTTAA chr4 - 94230402 22664401 22664400 22666799 71563604 71563603 71566002 2399 TTGCTCCTCATCTGTTTCAAAGGATGTCGGCAGCTTAATGTTAACAACTGCCCTCAGGTTAGCCCAGAAAAGGGCATGCTTGCTCCTCTCCTTTGGCCACTCCAGGTACGTTCTCTTTGCCATGAGAGCCTTCAGCTTGTGGTACCTCGCAGGGATAACGTATGAAGGGATCGGCTCCAGCAAGATCAGGATTAAGCTGTTGGAATTCTCACTAAACAACCTGTGATGGGCAAAGTACAGCTCGTAGTGACACCACTCGCTCTGCACAAAGTTGGGCGACAACACAAAGATGGACTTGTAGCTCTTCTCAATGCAGTTAATGATGTTCTCCACAATGCTTTTGCCAGGGATAAAGTTCCTCTCATGCTGACACAGCTGGATGCAGCCCTCCCCCTTCTCCAAATTGGGGATCAGCTCATTCTTCACCCACAGGGAATCGCGTTCGCTGTAGGAAATGAAGGCGTGGAACTGCAGAGCGGTTTCCCGCTCCTCGGGGCAGTCGTGCCAAGCTCTCCTCTTCGTCTGCGTCCACTGCCACAGCATCCGCACGTACCACGGCACATCCAGGTAGATGCACGGAAAGGCCAC---CACAGCCACCAGCACCAGGGTCAGCAGCAGAGCTGTCACAAGCAGCAGAGTCGTGTTGCAAGCCAGCTCGGTCAAGTGGAAGTCCTCAAGCTGCGTTCCGCTCAAGTCTTCTGGGTACTTGCACACGTACGCCTCTGGCCAGC---CGGACAGCTTGCC-----CCCAGACTGCCTCTCCAGGCGCAGGAAGTCCTGCAGCTCACACGAACACTTGAACGGGTTTTGCCCAGCTTGCAGCTCCTTCACGCTCGGGCAGGTCTCAAAGAAGTCAGCAGATGGGGTGAGGATCAAATTCCTCTCTATGTTCAGGATCTCCAGGCCTGTAAAGGCTCTGCACCCTGGCAGGTCGGCCAGCCGGTTGGATGCCAGGTTCAGCTCCTGCAATGAGTGCAGCTCAGTGATCCCCTTGGGGACATTGGCAATCTGGTTGTTTTGTAGGTCCACTTTGTTGATATTAGCTGGCAAGCACTCAAACACAGCCTCTGTCAGCTGGTTGGAGGACAGGTCCAGCTCTGCCAGAGAATCAGCCCACTGACAGCGCCCCTCAGCTCTACTGTTACGCAGCAAGTTGCTGCTCATGTCCAGATACCTCAGTGATTTCATACGGCTGGTCATGAAGCTCACCTTGGAAAGGCTCTCAAATTTATTCCTATGCAAAATAAGTATTTTCAAATTTGCCAGAGTGTCACAATTCTGGAACAATTCGTCTGTCAGGGCATTGCGGGAAAAATTTATATACTGAAATGAGCTTCGTTTTTTTGGGCAAAGCATGTGCGGCATACATGCATCATGTATTGTCAAACTATCAATATTCATCTCTGAAAACTGTCTGTACAAAATCTCCTGGTTGAAATAATACAACTTATTTCG-AACACGCTCCAAAGTTAGTGCCTTCATGGAGCTACCCAAGGACAGTAATTGTTCCAGAGATCTTAAAAGGGGTACATGTTTATATTCAGTCAGCTCCACCACTGGTCCCCG-AAAAATCAAATTTCTCACAGTTAAGTGCTCCACAGATGAATCCCAAACTAGCAGAAAAATTTGCAGAATGA-CAGTCCATTCTAAG-----TCCACAGTGTCAAGCGTTAGA-TCTGTTGTTTTGATTTTCTTCTGAAGCTCTAAAGAAGGGGAGGGAAAATCTTTGTGGC--TCAAGGTATATCTTAA-ATTAACTATTTTTAACTTTTCTGAAGTGCTCA--------TTCCATCATATAAGAGGGAAAAATTGAAGTTTTGGTTTGTTGCAAAAACAATGTGAAGGCTCCGTGTATTTAAAGCTGTCAGACTTAGAGGCTCA------TACAGAGAAAAGTCTTCTAAGGTTAGGAAGACCGTGTCCAGCTGCAAATGTGCCACATATCTGAAGTCTGACCTTCGTATCATCATGGCACTTAATCCTAGATATTCTAAATGGAACATGATCCCAAATTCCTGACAGATTGGCAAGACAGTAAACTTGTTGAAAGAAAGATCTAAATGTCGAAGACGTGCAAGCAATTGGCAGTAAGCTGTCCAAATGTTATTGTGAGATAAATCTAAGTATTCTAAATCTTGATTAAACATGAAGGCACTAAAGTCAAGCTCTGTAATTAGATTATGAGAAAGGTTTAATACTTGAAGGTCAGAAAGAGAAGT--------AAATCTGAAGTTAGTAATTTCAGAGATGCTATTATGTGATAAATCTAATATGTGAGTATGGACTGGAATGTTTTTTGGAACTTCAGTTAGTAAATGTCCTGAATAGTTTGCAGTGATTTTATTTTCCACAGTTGGCTGGATATTATTCCAAAGTATGGATAAAAACACA---CAAGCAAAAACGTAGATACTTGTAA ..x.x.x....:xx.....:x.:x.:x:.x:.::..x..:....x.:.x..:..x.x.........:..:..xx..:.:.....::.......x.......x..::..x..:.x..x:.:.........................:.xx::..:..:x:..x:x:x..:..x..:.....:.....x.........:.:..:..x:::...:x...x.:x:.............:..x..:.....:..:........:.....x...........x.....x.................:.................:.....:..:...........:..........:......:........xx....x.x...x..:------..::.:..:..:.::.x:..x.:..::...:.:........x:x:.....::....:..:..x.....:..:..:..:.....x..:x:xx...xxx.:..:..x::.x:xx:..x..x:..:..x.x.:xx.....x........x....x.....xx.x:.....x....x.....:.........x:.::...:...---........x..x..x..x...-:...x.::x.--..x..:.x.........::.......:.x:.::..:.x..x...:.......:x..:x.xx....x..xx.:::.........x.::...x::..x.xx..x.......---.x:...x:.::.:-----.:::.x..::x.:.:::-----.x:..x..::x:........x.x...:.x...:..:..x.x...x....x:.x:xx.:...:x:..x.....x...x:.....:.....x......xx.:::.:::....x:xx..x...x...:x.:xxxx....:xx.....x:x.::..:..x..x.....:.::.:xx::...:.x..x.x:..x..:..:.....x.xx.x...:.:x::..:::x:..:..:..::.xx:x..:.x:...:.x..x..:..x.x.x:x.....x:.:.xx..:..:..::::..x....xx..x..x...xx:..x..:....::.::.:.x.::.:.x.xxx...:....xxx:...:x::.:.:.xx.....::xxx:x..:x:.:..x.x...x.::.....xxx:::..:x..xxx....:xx:.x.......::.::..:...:.....:::.:x...::....:.x..:..:......:.:.:...x..x:.:.:x...xx...x..:.x:..x.xx:::.....x.:::.:..x:...x...:..:.x.x...x:....x....x..x:x.xx..:..x........::xx.x.x:..:...xx:x..x..:..xx.xx:...:........x......xxxx........:::x:..-..x:...:.:x.x.....:x....-:.:.:.:..:.xx..:.:...:....xx.-------------------.:...::...:xxxx.....---------------------..xx..:...x.x..x.::.x:-x.xx:.:.....x:xx.:.x.x.::.::.......:.xx:xx.....xx.::x....:.:.:------...-...x.xx...:...-----..:.::xx..::..x..x.:.-..x..x:xx....x::...xx..-..:...:.x:..::xxx::x:...x...x:::.:--...xx:.x:.x:....-....:::.x..x...x:x::..:....::.x.--------...xx.::x...:x:::x...----------:.:...x.x..-........x.......x.::x..:...:.:.::.xx:......xxx.x....------.x:.x.x..x.:.:.::...:x::..:.:..:xxx::::..x.....:..x..x.:xx::xxx..:...:.::..:.:.x.x....:.....:.....:.::x.x.::.:x..x:.:.x.x.x..........x......x....:.:.xx.:..x.::.....x..:...........:.x:.:..x::...xx::x......x.x:::x.:::x.xx.x...:...........:..:...........:..:..:...x....::....x..:.....:xx:xx:...xx:.....:.....x:.:..x...xxx.:x..x..x...:.:x.--------.:.:......--------:....x....:x:..x..x..:.x......x.:x.x:..x.xx.x:..x.x..:.........x.x.:.x..xxxx:x.::...x.x..:.:.x.::.x..:....:.xx.:.xx::......x:.:x.:.x..x...---..x:.x..:.---...:.....---.:..x:...x... 382M6I200M3D21M1I10M2I109M3D13M5D17M5I661M1I24M1D29M19I20M21I22M1D62M6I3M1D14M5D21M1D23M1I34M2D16M1D32M8D21M10I11M1I52M6D335M8D10M8I138M3I10M3D9M3I13M 1431/2312 61.9% 2399/94230402 0.0% 135/2312 5.8% 16162688 NA +11648 chr4 + 190214555 38827129 38827128 38827638 510 TTAAAAGCGGCTCTAATGTTAGCCCAAAAGAGCCCACGTTTGCTTTTC-TCCTTGGGCCACTGCAAATAAGTCCGCTGCGTCATGAGAGCCTTCAGCTTGTGGTACTTGTTGGGAATGCTGTTCTGTGGAATGGGTTCCAGTAAGATGAGGATTAAGTTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAATAGAGTTCGTAATGGCACCACTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGTTGATGATATTTTCCACAATGCTCTTGCCAGGGACAAAGTTTCTCTCATGAAGACAAATCT------GTATATCTTCTTTTTCTAGGTAAGGTACCAATTCACTTTTCACCCAGGCAGAATCATGTTCACTATATGAAATAAAAGCATGAAACTGGAGG--TTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGAGTCTGGGTCCACTGGCACACCATCCTGAGATACCAG chr4 - 94230402 73114474 73114473 73114977 21115426 21115425 21115929 504 TTTAGAGCTGCTTTCAAGTTTTCCCAAAACA-TCTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTAGCAGATGTCTTTCGTGGGGGCTC--------------GCTTGGGCTTCCGCTTGGCTTGGAGCCATGCCCAGGTCATTCTCATGTACCAG ..x.:...x...:.x.x...xx.......x.-:.::.xx.....:...-..xxx:.......x..::..:...:xxxxxx....x.xxx:.:x...:...::.x..:.x.....:..xx:x.xx:x:x.......:.....:.:.........::xxx:..::xxx:::..:.x...:..::x:x::..x.x:....xx..:..:..x.x.........:.....x.......xxxxx..:.:x.......xx.x.....::............x...::.....:..x........x.x...x.....x.......::.x..:...:..:..x.x.:------.x:x.:x.x.:.x:..:..x.:xx.:....xxx:::...:.......x::..:..:.x:.....:..x..:.:......:.x:x.x::..x.--....x.x..:.:..--------------x.:...x.:.x...:x:.::...:x...:xxx..x::...:..x.x:...... 31M1D16M1I289M6I92M2I14M14D53M 304/495 61.4% 504/94230402 0.0% 24/495 4.8% -34287345 -59943057 +11657 chr4 + 190214555 38827129 38827128 38827638 510 TTAAAAGCGGCTCTAATGTTAGCCCAAAAGAGCCCACGTTTGCTTTTC-TCCTTGGGCCACTGCAAATAAGTCCGCTGCGTCATGAGAGCCTTCAGCTTGTGGTACTTGTTGGGAATGCTGTTCTGTGGAATGGGTTCCAGTAAGATGAGGATTAAGTTATTAGATCCTTCATGAAAGAGATTGTGATGGGCAAAATAGAGTTCGTAATGGCACCACTCACTCTGGACAAAGTTGGGAGACAAAACAAAGATGGACTTGTAACTCTTCTCAATGCAGTTGATGATATTTTCCACAATGCTCTTGCCAGGGACAAAGTTTCTCTCATGAAGACAAATCT------GTATATCTTCTTTTTCTAGGTAAGGTACCAATTCACTTTTCACCCAGGCAGAATCATGTTCACTATATGAAATAAAAGCATGAAACTGGAGG--TTTCTTTGGAGTTCTTCTAAGGGTATGTTCCTGGCCCTGCGCCGAGTCTGGGTCCACTGGCACACCATCCTGAGATACCAG chr4 - 94230402 73122354 73122353 73122857 21107546 21107545 21108049 504 TTCAAGGCTGCTTTCAAGTTTTCCCAAAACA-TCTGCTGTTGCTCTTCATCAGGAGGCCACTCCAGGTAGGTCTTGGTGTTCATTATCTTCCGCAGTTTGCAGAACCTCTTGGGGATCGCCTGGCTCTGAATGGGCTCCAGCAGGATGAGGATCGCCACATCGTTGTTCTCGTCAAAAAGGCGAAAGTGCGAGAAATCCAGCTCATACTTGCACCACTCGCTCTGCACAAAGTGCTCTGATAGCACAAAGAGCGTCTTGTGGCTCTTCTCAATGGAGTCAATGATGTTGTCCACAATCCACTTCCCAGGCACAAAGTCCCGCTTATGGAGGCACAGCCTAAAGGGGGGACATGCCTGCTCCAGCTGCTGCACCATGATGTTTTCCACCCAGTTGGAGTCGTTCTCACTGTAGGAGACAAAAGCGTCGTAGCAGATGTCTTTCGTGGGGGCTC--------------GCTTGGGCTTCCGCTTGGCTTGGAGCCATGCCCAGGTCATTCTCATGTACCAG ..x..:..x...:.x.x...xx.......x.-:.::.xx.....:...-..xxx:.......x..::..:...:xxxxxx....x.xxx:.:x...:...::.x..:.x.....:..xx:x.xx:x:x.......:.....:.:.........::xxx:..::xxx:::..:.x...:..::x:x::..x.x:....xx..:..:..x.x.........:.....x.......xxxxx..:.:x.......xx.x.....::............x...::.....:..x........x.x...x.....x.......::.x..:...:..:..x.x.:------.x:x.:x.x.:.x:..:..x.:xx.:....xxx:::...:.......x::..:..:.x:.....:..x..:.:......:.x:x.x::..x.--....x.x..:.:..--------------x.:...x.:.x...:x:.::...:x...:xxx..x::...:..x.x:...... 31M1D16M1I289M6I92M2I14M14D53M 304/495 61.4% 504/94230402 0.0% 24/495 4.8% -34295225 -59935177 +3307 chr4 + 190214555 38858698 38858697 38858827 130 CAACAGAGTGAGACTCTGGCTCAAAAGAAAAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGGGA---GAGAGAGAGAG chr4 - 94230402 62511286 62511285 62511415 31718988 31718987 31719117 130 CAATAGAA--GGACTCTTCTCTAAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGA-AGGGTAAGGCTGACAGCAACTTGAAAGAGAGAG ...:...:--:......xx:::......x...::...:....:....x....:.x::x..xx..x:.:.:.x::.....:..:x...::..:..:x...-..:.x:..:xx..x..x:.---..:........ 8M2D89M1D19M3I11M 81/127 63.8% 130/94230402 0.0% 6/127 4.7% -23652588 -70577814 +3839 chr4 + 190214555 38858728 38858727 38858924 197 AAAGAAAGAAAGAAAGAGAGAGAGA-GAGAGGGAGAGAGAGAGAGAGAGGG------------AGAGAGAGAGAGAGGGAGAGAGAGAGAGA----GAGAGAGGGAGAGA----GAGAGAGAGAGGA---AGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAATTAA chr4 - 94230402 56098324 56098323 56098545 38131858 38131857 38132079 222 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAA .:...x.::x..x....x..x....-.:..x.....x.:x:.::....x.x------------......:x:::.x...x:.:::...:..:----.....xx..::.:.----.::....xx:...---.:.x....:...-...:..xx.:....x.:...::...:....:..:.:x:.:..:.:.:..:....xx.::.:.:xxx:....:....... 25M1I25M12I29M4I14M4I13M3I12M1I79M 123/197 62.4% 222/94230402 0.0% 25/197 12.7% -17239596 -76990806 +3346 chr4 + 190214555 38858801 38858800 38858864 64 GAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237697 9237696 9237760 84992643 84992642 84992706 64 GGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:..x.x..x.:.:....:..:x..x.:.........:....:....:..:...:....::... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 29621104 NA +3175 chr4 + 190214555 38858821 38858820 38858904 84 GAGAGAGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....:.x..xx:.x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x..::.......:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 2000528 NA +3007 chr4 + 190214555 38890397 38890396 38890451 55 GTCTCAAAAAAAAAAACAAAAAAAAACAGCAAGGGAGTTGGGAGTTGGGGATGAC chr4 - 94230402 6440203 6440202 6440257 87790146 87790145 87790200 55 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATGAC ....:.....:.....x:........x.:x:...:..xx.....x...:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 32450194 NA +5109 chr4 + 190214555 38891727 38891726 38891839 113 ATTTGTTTTTCTCCAGGCTGTGGATTCCCCTCCAAGTGGAGGAGGATGGGCAGGCTGGGGATCCTGGGGCAAATCTCTGCTGTCGTCAGCATCTGCCACAGTAGGTAAGCATT chr4 - 94230402 22687345 22687344 22687452 71542951 71542950 71543058 108 ATCTGTTCTTA--CAGGCTGCAGACTCATCT---AAAGCAAGTAGATGGGGAGCTTGGGGCTCCTGGGGCAAGTCTCTCCTGTCATCAGCTTCAGCCACAGTGGGTAAGTGTT ..:....:..x--.......::..:..x:..---.:x.x.:.x:......x..x:.....x...........:.....x.....:.....x..x........:......::.. 11M2D18M3D79M 82/108 75.9% 108/94230402 0.0% 5/108 4.6% 16204382 NA +5109 chr4 + 190214555 38891727 38891726 38891839 113 ATTTGTTTTTCTCCAGGCTGTGGATTCCCCTCCAAGTGGAGGAGGATGGGCAGGCTGGGGATCCTGGGGCAAATCTCTGCTGTCGTCAGCATCTGCCACAGTAGGTAAGCATT chr4 - 94230402 22685638 22685637 22685745 71544658 71544657 71544765 108 ATCTGTTCTTA--CAGGCTGCAGACTCATCT---AAAGCAAGTAGATGGGGAGCTTGGGGCTCCTGGGGCAAGTCTCTCCTGTCATCAGCTTCAGCCACAGTGGGTAAGTGTT ..:....:..x--.......::..:..x:..---.:x.x.:.x:......x..x:.....x...........:.....x.....:.....x..x........:......::.. 11M2D18M3D79M 82/108 75.9% 108/94230402 0.0% 5/108 4.6% 16206089 NA +6580 chr4 + 190214555 38905509 38905508 38905902 394 TTATTTCCAACAGGTCATGGATTGACGGCAGTCAAGGAAAAAGCAGGAGCCACTCTACGGATTCATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAGTCCCTGAAA-GTGAGTGATGTGT--------CTCCTCTGGGTGTTCTTGGACTTTATTACA---CCATGTGCAT---AATCAGAGGTTTTCCAAGTTCAGATCA----------------GCGACGTG-AACTCTTAAAGG----------------------------------ATTTCTTTTTTCTCT------TTAGTAACAGATGCAGCCACAGATCAGGGCCCTGCAGAAAGCCCACCCACTTCCCCTTCATCAGCCTCTCGGGGTATGCTGTCTGCCATCACCAATGTGGTTCAAAACACAGTGAGTCGCTGGCTGCTTCCTCTCTTTCCCCTGTATTTCCC chr4 - 94230402 22698436 22698435 22698882 71531521 71531520 71531967 447 TTTTTTGCTGCAGGTCATGGGATAACAGCAGTAAGAGAAAAAGCAGAAACTACTCTAGGAATTCATCATGCAAGTTCAGCACCTTCAGAAGCAGCAGAGC---ATCCTGCAG---------CTGAAACATCAGTTACACGTAAGTTCAACTTCACTGAAATCTTTGACACTTT-TGACACTGCCAAGTTAATCCAATTCACAAAATTTTAAGATTTTGATCACAGGATCCCATTTACTGTAATTTGTGACTTTTAGAGGTGAAAGGATGCTGTAGCTTGCTCCCTTTTTTTAATTTTCTTTTTGCTGTTGTTTGTTAGAAGCAGAAGATTATCCTGACCAAAGCTCTTCAGAGAA------TATTCCTCCTTCTTCTGGATCTCGTGGGATGTTGTCAGCTATCACTAATGCTGTACAGAACACAGTGAGTTGTTTCAGTGGGCCTCTCTTCTCTTGGGATTTTTC ..x...x.x:..........:x.:..:.....x.::..........:.:.:......x.:......x:..:..:...x.x.:....x....x...xx.:.---..x...x.:---------......-:.x...x.:::..--------..:.x...::xx:.:.x:x.....-.x...---...x..xx..---.x...x.::x...:x.::..:x.....----------------.::.:x..-:...:...:...----------------------------------x.........x..x.------....x.:....x.xxxx:x.x..:..::..:..x....:.:------:.:.:.:.....x..x.xx.....x..x...:....x..:.....:....:x..x..:............:.:.xxxxxxxx........::.::x.x....::. 100M3D9M9D6M1I13M8I24M1D5M3I10M3I27M16I8M1I12M34I15M6I41M6D105M 249/375 66.4% 447/94230402 0.0% 91/375 24.3% 16207073 NA +9414 chr4 + 190214555 38908580 38908579 38908734 155 TCTCATCTGCAGGGTAAAAGTGTCTTAACTGGAGGCCTTGATGCGTTGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGCTTTAAGCGGACCAAGACGCTCATGGAGAGAACTGTTTCCTTGTCTCAGGTTGGATT chr4 - 94230402 22699507 22699506 22699661 71530742 71530741 71530896 155 TCTTTTATGCAGGGGAAGAGTGTATTATCTGGAGGCTTAGATGCTTTAGAATTTATTGGGAAGACAACCATGAATGTCCTTGCAGAAAACGATCCTGGATTTAAGAGAACAAAAACACTGATGGCAAGAACAGTTTCTCTGTCTCAGGTTGGATT ...:x.x.......x..:.....x...x........:.x.....x..:.....:..:..x....x.......................::..:..x..x......x.:..x..:..:..x....x:.....x.....::................ 155M 124/155 80.0% 155/94230402 0.0% 0/155 0.0% 16209073 NA +3301 chr4 + 190214555 38909170 38909169 38909271 102 CTTAGTAGCTGAGTGACCTTGGGCAAGTTACTTAGCCCCTCTGTGCCTCAGCTTACTCATCTGTACACTGGGGATAATTTAAATACCTACC----AATAACTTTGT chr4 - 94230402 11947207 11947206 11947311 82283092 82283091 82283196 105 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATAC-AATGCTAACCTTGAAGGAACTTTGT ..:.x..:...x........:..:x...:.....::.:x:.....:.:...:..x.:...x.:.:x.x..:xx.....x:-...:.:x...----.:x........ 80M1D10M4I11M 68/101 67.3% 105/94230402 0.0% 5/101 5.0% 26961963 NA +9410 chr4 + 190214555 38914906 38914905 38915077 172 TGTGTATTTCTGCAGATGTTAAGGGAAGCTAAGGAGAAGGAGAAGCAGAGACTGGCACAGCAGCTCACGATGGAGAGAACCGCGCACTACGGGATGCTGTTTGATGAATATCAAGGCTTGTCACACCTGGAAGCCCTGGAAATTCTGTCCAATGAAAGCGAAAGCAAGGTAC chr4 - 94230402 22702082 22702081 22702253 71528150 71528149 71528321 172 TGCATCTTTTTGCAGCTGCTGCGAGAAGCTAAAGAAAAAGAGAGACAGAGACGGGCCCAGCAAGTCACAGTTGAAAGGACAGCACACTATGGACTGCTTTTTGATGAGTTCCAGGGTTTGTCTCATCTTGAAGCTCTAGAAATCTTGTCAAATGAAAGTGAAAACCAGGTAC ..::.x...:.....x..:.:x.:........:..:..:....::.......x...x.....:x....::.x..:..:..x..:.....:..:x....x........:.x:..:..:.....x..:..x.....:..:.....::....x........:....:.x...... 172M 127/172 73.8% 172/94230402 0.0% 0/172 0.0% 16212824 NA +5706 chr4 + 190214555 38922758 38922757 38922905 148 TTCTTTTTTCAGGTTCAGTCATTTTTAGCATCACTTGATGGAGAGAAGCTGGAACTCTTAAAAAATGACCTAATTTCCATTAAAGACATCTTTGCAGCCAAAGAATTAGAGAATGAAGAAAATCAAGAAGAACAAGGTAAAGGAAAAT chr4 - 94230402 22703783 22703782 22703930 71526473 71526472 71526620 148 TTTCTTTTACAGATTCAGTCATATTTGGAAACACTTGATGGAGAGCAGTTGGAGGCTGTGAAAAATGATTTAATTGCTATAAAGGAGATTTTTGTTCCAACGGAATCGGACGATGAGGTGGTACAGGCACAGAAAGGTAATTAGAAAT ..::....x...:.........x...:.x.x..............x..:....:x::x.:........::.....x.:..x..:..x..:....:xx.x.x:....::..x:....:.x::xx..:.x.x.:x.......xx::.... 148M 99/148 66.9% 148/94230402 0.0% 0/148 0.0% 16218975 NA +5751 chr4 + 190214555 38929246 38929245 38929342 97 AGAAGAAAAGGGAGAAGAATTTGCTCGCATGCTTACAGAGCTTCTCTTTGAATTACATGTGGCGGCCACACCTGACAAACTCAATAAGGTCAGCACT chr4 - 94230402 22708290 22708289 22708386 71522017 71522016 71522113 97 AGCAGATATGGGAGAAGAGTTTGTCAGCATGCTCACCGAGCTGCTATTTGAATTGCATGTGGCTGCAACTCCTGACAAACTGAACAAGGTTAGTGCT ..x...x.x.........:....::x.......:..x.....x..x........:........x..x..x...........x..:.....:..::.. 97M 77/97 79.4% 97/94230402 0.0% 0/97 0.0% 16220956 NA +10613 chr4 + 190214555 38932221 38932220 38932380 160 TCTATTC---ATTTCAGGAAGTATACATGTCGTCCATTGAAAGTCTGGCGGAGGTAACAGCGCGCTGTATTGAGCAGCTTCATAAAGTAGCAGAATTAATTCTTCATGGACAAGAAGAGGAAAAACCAGCTCAGGACCAAGCAAAAGTTCTAATAAAGTAAGT chr4 - 94230402 22710863 22710862 22711025 71519378 71519377 71519540 163 TCTATTCTCAATTTAAGGAGATCTACATGCTGTCTATTGAAAGTCTGGCTGAGGTAACTGCTCGTTGTATAGAACAGCTTCATAAAGTAGCAGAATTAATTCTACATGGGCAGGAAGTAGAAAAGACAGCTCAAGATCAAGCAAAAGTACTGACAAAGTAAGT .......---....x....::.x......::...:..............x........x..x..:.....x..:.............................x.....:..:....x:.....:x.......:..:...........x..:.:......... 7M3I153M 135/160 84.4% 163/94230402 0.0% 3/160 1.9% 16221358 NA +5466 chr4 + 190214555 38935698 38935697 38935824 127 TTTTTTTTTTCTTCTTT----CAGATTAACTACTGCAATGTGCAATGAAGTGGCCTCTTTATCAAAGAAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTACAGTCTTGAATTTTTTTCACCTTTT chr4 - 94230402 22712000 22711999 22712125 71518278 71518277 71518403 126 TTTGTGTCTCCTTTTTTAAAACAGTTTAACAAGTGCTATGTGCAATGAAGTTTCATCTTTATCGAAGAAGTTTTCTGATTCTTTAACAGCAGCTGGGGTAAGAAAATAAC-----ATTTTCTTTACCGTTT ...x.x.:.:...:...----...x.....x.x...x..............xx.x........:.........x.x:..........x:.x.:..........xx.:.::-----.....:..:...x... 17M4I89M5D16M 94/122 77.0% 126/94230402 0.0% 9/122 7.4% 16223698 NA +4054 chr4 + 190214555 38935732 38935731 38935806 75 TGTGCAATGAAGTGGCCTCTTTATCAAAGAAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTACAGTCTT chr4 - 94230402 22656946 22656945 22657020 71573383 71573382 71573457 75 TGTGCAATGAAGTTTCATCTTTATCGAATAAGTTTTCCAATTCTTCAACAGCAGCTGGGGAAAAATAATAGCCTT .............xx.x........:..x......x.x.......:...x:.x.:.....x..:..x.:..:... 75M 58/75 77.3% 75/94230402 0.0% 0/75 0.0% 16278786 NA +3550 chr4 + 190214555 38937810 38937809 38937892 83 CTGCAGCCTCTGCCTCCCAAGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCGGGCCACCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCACT ..:.....:xx:x..:.:::.........x...x..x.x........::::.........:.:....x...-----....... 71M5D7M 57/78 73.1% 78/94230402 0.0% 5/78 6.4% 20740684 NA +4741 chr4 + 190214555 38940945 38940944 38941031 87 ATTTCATACT----TCTGATTCCACAGAGCAACAAGAAGGCCGAGGTCCTTAACCCCATGATCAGTAGTGTATTGTTAGAGGTAAGTGGCC chr4 - 94230402 22715544 22715543 22715633 71514770 71514769 71514859 90 ATTTCATTCTATTTTCTGGTTT-ACAGAGCAGCATGAAGGCAGAGGTTCTTAACCCCATCATTGACAGCGTATTATTAGAGGTAAGTTGTC .......x..----....:..:-........:..x......x.....:...........x..::::..:.....:............x.:. 10M4I8M1D68M 70/86 81.4% 90/94230402 0.0% 5/86 5.8% 16225401 NA +9122 chr4 + 190214555 38943432 38943431 38943699 268 AACCTCATTTTTCTCCTCTCACAGGGCTGCAACAGTACAACGTACATACAGGATGCCTTCCAGCTGCTGCTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGTTGTTTGAAAGCACAGCCGTGAC-----CTGGCCAGACTCCATCT----AGTTAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTCTCTGTG-CGCCTGGCCACAGACATCCATTTGAGGACACTACAAGCAATTTTGCACA-GACAATATTGAG chr4 - 94230402 22717147 22717146 22717425 71512978 71512977 71513256 279 AACCTCACTTTCTCTCCCCATTAGGGCTGCAACAGTACTACTTATGTTCAGGATGCTTTCCAGCTATTGCTTCCAGTGCTGCAAATTTCACATATCCAGACCAGTTGTTTGAAAACACAAAAGTGACGGTCTCCCAGCAGTTGTCACCTCTGGGTTTAACGGAGACCACAGACCTAATCCCTTTAATGTGTATGGATGGAAGAGGTGGTATGGAAGACGTCTGGCGTCCAAGAGTCCTCTGAAGACACTCAATGTGGTTTTGCGCATTACAATATCGAG .......:...::::.:.:xx:................x..x..::.x........:........::....x..x..x.....::.:...........................:....:xx.....-----.:x:x...x:x:..:..----:x....x......x:.x.:..xxx.:x.:.:...:....:x:x.x:.:.:.:..x.x.xx:x.-..:.....xx.x:.x.x:.x.:...:......xx.x.:::......:..-x.......:... 127M5I17M4I63M1I49M1I12M 181/268 67.5% 279/94230402 0.0% 11/268 4.1% 16226285 NA +3271 chr4 + 190214555 38947983 38947982 38948107 125 TTCTATTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTCTCTTTCTTTCTTCTTTCTTTCTTCTTTTTTTCATTTTTTTTTCTTTTGAGAC--ACACTGTCACTCTGTCCCCCAG chr4 - 94230402 79422453 79422452 79422579 14807824 14807823 14807950 127 TTCTAATTTTTTCCCTCCTTTCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTTTCTCCTTTGCCATTGTTATTTGAGGCTTTCACTCTCTCTTTTCTCTCCAG .....x......:.:.:.....:x.:....:...::xx:x..::.x.....:xx:.:....:x.:...x....xx...:.:::x.x::x..x.:x......:.--x....x..x..:.x::.:.... 103M2I22M 76/125 60.8% 127/94230402 0.0% 2/125 1.6% -40474470 -53755932 +3059 chr4 + 190214555 38948017 38948016 38948081 65 TTTCTTTTTCTTTCTTCTCTTTCTTTCTTCTTTCTTTCTTCTTTTTTTCATTTTTTTTTCTTTTG chr4 - 94230402 2453082 2453081 2453146 91777257 91777256 91777321 65 TTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTTTG .....x...:....:....:.:...:..x.:.:..:::.x.......::x.x..x....x..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 36494935 NA +17528 chr4 + 190214555 38951994 38951993 38952446 453 CTAATCCTCAGACTAAAACTGAACAGCTCTGGGATACATAATGACTACAGAAGCAATTTCAGAAA-CTTCTGGAGGGAAGCATCACACAAATGAATGATTCTGTGGTTCAGAATTATTAGCTTGATGCCCA---GATGCATATCGTATTTGCAAGAGGCAGTTTACAATCTGCTCAGCTTAACAAATGCAGCACAAGGGGATTTAAATCCCTGCATTTGCAATTTCTGTCTCTCCCTCTCCAAATTTATGGTGAAATTATAGACACCAGTAATGTGTCAGGGCTGAGTGAACTGAGGTCTCTGCTCTGCTCTCACAGCTCCATTTCACTCAAAGGAG-AGTAATAAATGGAAAGCAACAAAAAAGTCTCAGCAGATAATGAATCTGTGTCCTAATGACCTTC-CCAAACTACAAAATGGATTCATAATTTACCTGATATTGCCCAAACCATTCGGTGCC chr4 - 94230402 22724290 22724289 22724742 71505661 71505660 71506113 453 CTATTCCT---ATTAAATCTGAACTGCATCATGCAGTGTAATGGCTGGAGAAGCAATTTCAGAAAGCTTCAGGAGGGAAAAGCTATATAAATGGAAGGGATGGAGCTTATGAAGTATTAACGTGACGCTAAATTGCTGCGTATCATATTTGCAATGGGCAGTTTACAATCTGTTCGTCCTGATGGATTTAGCACAAGGGAGTGTGAAGCCCTAGCTCTGCAATTTCTGTCTCTGCCTAGT--AATTTATGGTTAGATTATACACACAAATAACGTGTTAGAGCAGAATGAGTTTGGGACCCTGCTCAGCCCAAACAGCTCCATTATGCTCAGAGGAGCAGTAATAAATGGAAAGTAA-GGAAAAGTTCCAGGAGATAATGAGTTTGAATACTAATGACCTAAGCTAATCCAAAAAACAGAAACGCAATTTTTCAAAAAGTACAAAACCCATTTGGCATC ...x....---.:....x......x..x:::x.xx:::.....:..:x.................-....x........:x:::.:.:.....:.x.:xx:x.x.x..xx...x.....:.x...:..:x.---.x...:....:.........x:................:..:x.:.:.:::..x:..........::.x.:..x....:xx.:................x...xx:--..........x.:......x....x.:...:....:..:..x..:...::.x:..x.:......x..:.xx...........x::....:.....-................:..-::......::...x.........:.:..x:.x..........xx-.:..x.:.x....::..xx.::.....x:.x:.x.x.:.xx..x.....:..:::. 8M3D54M1I65M3I106M2D95M1I19M1D44M1I56M 316/447 70.7% 453/94230402 0.0% 12/447 2.7% 16227704 NA +3399 chr4 + 190214555 38990818 38990817 38990865 48 GTTTGTTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCT chr4 - 94230402 60463245 60463244 60463292 33767111 33767110 33767158 48 GTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGTCT ...::...::.............x.............:.:...:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -21472427 -72757975 +3222 chr4 + 190214555 39041057 39041056 39041112 56 AAAAAAAAAAAAAAAAAAAGCTAAGGAAATTCTCTTTCTTGTCTTTTCTTTTTTTC chr4 - 94230402 22159190 22159189 22159245 72071158 72071157 72071213 56 AAAAAAAAAAAAAAAAAAAGCTTTGCAAGTTTTTTGTGTTGTTTTTTTTTCTTTCC ......................xx.x..:..:.:.x.x....:....:..:...:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 16881867 NA +3057 chr4 + 190214555 39051697 39051696 39051737 41 CTTAAAAAAAGAAAAAACAAACAAACAAACAAACAAACCAG chr4 - 94230402 81661607 81661606 81661647 12568756 12568755 12568796 41 CTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAG ..........:.x....................x...x... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -42609910 -51620492 +36534 chr4 + 190214555 39062198 39062197 39063061 864 AAGAGTTAATATACTAAGCAGCAGAGACTGAGATACTGCAACGGGGATAGTGTTTTCTGTCTCTGTCATTTGTGGTTTAAGAAAAAGGGGGTGGTGTTCTGCATTTGAAAGGACTTTAATGAATGCTG-TCAGTGTTTGTGAGACCTAATGGTCAGTATGGGAAAGGAGAGCCGGGAAAGTGGTCTAGCTGCTTC-AGGATAGGTGGATGAGAGTTTGCTCTGATTGAACGGAATGTTCCACCGT---GTTTCATCT-----TTATTCATTATCCTTTGTTCTTTAAAATCTGATATATTGGCATAA-AAGTAATTGTAGA----TATATATATGAATGTGAT------------TTATTTTCCTTTACATATTTTTGTTGT----GTACAGCAGGGCATATACTTCTCTTGTCTTGGTTGGATGCACAAATCT------GTGTGCAGTGCTTTTTGCCC-GTTGCCTAGACGATCACTTGGTTTCTCTGAGGATGTCTGGTTCTCGTAAAGAGTTTGATGTGAAACAGATTTTGAAAATCAGATGGAGGTGGTTTGGTCATCAAGCATCATCTCCTAATTCTACAGTTGACAGCCAGCAGGGAGAATTTTGGAACCGAGGACAGACTGGAGCAAACGGTGGGAGAAAGTTTTTAGATCCATGTAGCCTACAATTGCCTTTGGCTTCAATTGGTTACCGAAGGTCCAGCCAACTGGATTTTCAGAATTCACCTTCTTGGCCAATGGCATCCACCTCTGAAGTCCCTGCATTTGAGTTTACAGCAGAAGATTGTGGCGGTGCACATTGGCTGGATAGACCAGAAGTGGATGATGGCACTAGTGAAGAAGAAAATGAATCTGATTCCAGTTCATGCAGGTTGA---TTATTTTCTTACTGTTAGAAA chr4 - 94230402 22781279 22781278 22782150 71448253 71448252 71449124 872 AAGAGTTAACAGAATGAGAAG-AGATTCTGAGATGCCGTACAGGAATTACT--------TCTCTGTCATTTGTGGTTTAAGAAAA-GGGGGTGGTATTCATCTCTCGAAAGAGCTTTAATGAACACTGCTTGGTGCGTTTGAAAGCTAATGGTCAG-----------AGAGCAACAGACGCAGCCTTGGAGCTTTTAGGGCAAAGTGACTGGCGTTTTTCCTGATGGAAGTGATTGTTTCACCTTCTCTTTTTACCTCGGGATTTTTCATCACCCGTTGCCTTTTG------TTTATATTCAAATGACGAGCCGTTAAAGAAGCGTTTTTGTGTGAACGCGGTCCTTTCCCCCCCTCCTTCCCCTGTACAACCGCTGCTTGCCACAGACCGGCGGAGCATGTGTTTCTCTTGTCTTGGTTGGGTGCACAAATCTTCTTTTATGCATGCTGCTTCTTACCCTGTTGCCTAGACGATCACTGGCTTTCACTGAGGATGTCTGGTTCTCGTAAAGACTTTGACGTGAAGCAGATTTTAAAAATCAGATGGAGGTGGTTTGGTCATCAGGCGTCAGCCCCTAATTCTGCGATCGAGAGCCACCAGGGAGACTTCTGGAACGGAGGGCAAAATGTAACGACTGGTGGCACAAAGTTTTTAGATTCAAGTGACC------TGCCTTTAACAGCAGTTGGTTACGGGAGGTCCAGCCAACAGGATTTCCACAACTCACCTCCTTGGCCAATGGCATCCACCTCGGAAATCCCCGCGTTTGAGTTCTCTGCAGAGGATTGTGGAGGTGCACGCTGGCTTGGCAGACAAGAGACAGATGATAGAGCGAGTGAAGAAGAAAATGAATCGGACAGCAGTTCATGCAGGTTAATCGTTACTTTCCTATGGTGGGAAA .........:.x.x.:..x..-...xx.......:.:.:.xx..::x..x.--------..........................-.........:...xx.x:.:.....::..........::...-.::...:x.x...:.x...........-----------.....x:x::.x.::.:..x.xx....:-...::.::xx..:x:.x....x::.....x...xx..x....:....x.---x...:.:..-----..x.....:.:..x...:::...:------xx......x:x..:.-:..:x:..:x...----.x.x.:.:....:.:.:.------------.:x..::...x....xx:x:.xx...:----.xx.:..:.:....:.::..................:...........------:..::::x.....:..:...-..................x.x....x..........................x.....:.....:........:.............................:..:...x.:.........:.::.:..x.....x........x..:......x....:..:.x..x.:.:.x:.....x.x.............:..x..::..------.......::.xx..:........x.:.............x......:..x..:......:......................x...:....:..:........:x.x.....:........x.......::.....x.::....x...::::......:.x:.x....................x..:xx...............:.---...:....:..:x..x:.... 21M1D29M8D26M1D42M1I27M11D28M1I49M3I9M5I24M6D15M1I13M4I18M12I27M4I48M6I20M1I207M6D207M3I21M 626/831 75.3% 872/94230402 0.0% 74/831 8.9% 16280919 NA +3995 chr4 + 190214555 39062668 39062667 39062806 139 AAAGAGTTTGATGTGAAACAGATTTTGAAAATCAGATGGAGGTGGTTTGGTCATCAAGCATCATCTCCTAATTCTACA----------GTTGACAGCCAGCAGGGAGAATTTTGGAACCGAGGACAGACTGGAGCAAA--CGGTGGGAGAA chr4 - 94230402 86058377 86058376 86058519 8171884 8171883 8172026 143 AAAGAGTTTGATGTGAAGCAGATCCTAAGGCTCCGCTGGAGGTGGTTCAGCCACC------CCTCGCAGAGCTCCACAGGCACGGGGGGCTGCCA-CCAGCAGGAAGGATATGAGCACAGAGGA-ACACCGGTGCAGAACAGGTTGAAGAA .................:.....::.:.::x..x.x...........::.:..:.------.x..x.xx.::..:...----------.:..x..-........:..:..x.x:.x..x.....-.x..:..x...:.--x...x.:.... 55M6D17M10I7M1D28M1D13M2I11M 95/131 72.5% 143/94230402 0.0% 20/131 15.3% -46995709 -47234693 +3530 chr4 + 190214555 39069405 39069404 39069501 97 AAGTGAATTTTTCCCTATTAACATTTTATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964792 14964791 14964884 79265519 79265518 79265611 93 AAGTGCATTT----ATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x....----x...x:.x:.x..:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx........::............. 10M4D83M 63/93 67.7% 93/94230402 0.0% 4/93 4.3% 24104613 NA +3196 chr4 + 190214555 39069428 39069427 39069499 72 TTTTATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964813 14964812 14964884 79265519 79265518 79265590 72 TTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 24104615 NA +3264 chr4 + 190214555 39069428 39069427 39069517 90 TTTTATATATATATATATATATATATATATATATATATATATATATACACACACACACACAC---ACACACACACACATACATATTTATACTA chr4 - 94230402 88147169 88147168 88147261 6083142 6083141 6083234 93 TTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTA ....x.x.x.x..:..:..x:x..............:.x.:.:...:.:.............---.:.:.x:x.x.x::.:....:x.:.... 62M3I28M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% -49077741 -45152661 +3095 chr4 + 190214555 39069431 39069430 39069492 62 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 30673630 NA +3537 chr4 + 190214555 39069431 39069430 39069498 68 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 30673636 NA +3544 chr4 + 190214555 39069431 39069430 39069502 72 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:...:.:.::...x.:..:...x..:....:...::x..:.:xx.:.................x..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 30673640 NA +3551 chr4 + 190214555 39069431 39069430 39069504 74 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATA chr4 - 94230402 8395797 8395796 8395870 85834533 85834532 85834606 74 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.::...x.:..:...x..:....:...::x..:..xx...................x.....x.::x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 30673634 NA +3802 chr4 + 190214555 39069431 39069430 39069508 78 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATACATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x.....x..:x... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 30673638 NA +3002 chr4 + 190214555 39069432 39069431 39069495 64 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964821 14964820 14964884 79265519 79265518 79265582 64 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 24104611 NA +3193 chr4 + 190214555 39069432 39069431 39069497 66 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 24104613 NA +3097 chr4 + 190214555 39069433 39069432 39069502 70 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 14964814 14964813 14964883 79265520 79265519 79265589 70 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:....:...xx........::............ 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 24104619 NA +3031 chr4 + 190214555 39069441 39069440 39069520 80 TATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATACATATTTATACTATTT chr4 - 94230402 4481679 4481678 4481758 89748645 89748644 89748724 80 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCT .:...:.:.x.x:.....x:.:.:.:...:.::...x...:.....:x....:..x.xx.....:..:.x:.:.:...:. 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 34587762 NA +13121 chr4 + 190214555 39075907 39075906 39076150 244 AAAGATCTTTTTAATGTGATAGTGATATTTCAAAATGTGTGTTTTTTTTTCTTTT-----------CAGGACTTCCAATAGTAGTCAGACATTATCATCCTGTCATACTATGGAGCCATGTACATCAGATGAATTTTTCCAAGCCCTTAATCATGCCGAGCAAACATTTAAAAAAATGGAAAACTATTTGAGACATAAACAGTTGTGTGATGTAATTTTAGTCGCTGGTGATCGCAGAATTCCAGCTCACAGGTA chr4 - 94230402 22798969 22798968 22799212 71431191 71431190 71431434 244 AGAGATTGTTATAATTTAATATT-----------ATGTGAACTAAGTTTTCTATTACTGTCTTCAGCAGAACCTCCAACAGCAGTCATACCATATCATCTTGTCAAACTATGGAGCCCTGTACATCAGATGAATTTTTTCAGGCTCTCAATCATGCTGAACAAAGTTTTAAAAAGATGGAGAATTACCTTAGACACAAACAGCTATGTGATGTGGTGTTAGTTGCTGGTGATCGTAGAATTCCAGCTCACAGGTA .:....:x..x....x.:...x.-----------.....x::.xxx......x..-----------...:..:.....:..:.....x..xx.......:.....x...........x....................:..:..:..:........:..:....xx........:.....:..:..::.x.....:......:.:........::.x.....:...........:.................... 23M11D21M11I189M 187/233 80.3% 244/94230402 0.0% 22/233 9.4% 16276938 NA +13317 chr4 + 190214555 39075907 39075906 39076210 304 AAAGATCTTTTTAATGTGATAGTGATATTTCAAAATGTGTGTTTTTTTTTCTTTT-----------CAGGACTTCCAATAGTAGTCAGACATTATCATCCTGTCATACTATGGAGCCATGTACATCAGATGAATTTTTCCAAGCCCTTAATCATGCCGAGCAAACATTTAAAAAAATGGAAAACTATTTGAGACATAAACAGTTGTGTGATGTAATTTTAGTCGCTGGTGATCGCAGAATTCCAGCTCACAGGTAGTTGTTTTCTATATTTCTGTATGTGTGAAATATTTCCTCGGTAATTTAGATATGTATATT chr4 - 94230402 22789152 22789151 22789444 71440959 71440958 71441251 293 AGAGATTGTTATAATTTAATATT-----------ATGTGAACTAAGTTTTCTATTACTGTCTTCAGCAGAACCTCCAACAGCAGTCATACCATATCATCTTGTCAAACTATGGAGCCCTGTACATCAGATGAATTTTTTCAGGCTCTCAATCATGCTGAACAAAGTTTTAAAAAGATGGAGAATTATCTTAGACACAAACAGCTATGTGATGTGGTGTTAGTTGCTGGTGATCGTAGAATTCCAGCTCACAGGTAA--GCTTATAATGATC---------TGAAGTAACTTTATATTAGTTTACATATGTGTCTT .:....:x..x....x.:...x.-----------.....x::.xxx......x..-----------...:..:.....:..:.....x..xx.......:.....x...........x....................:..:..:..:........:..:....xx........:.....:..:...:.x.....:......:.:........::.x.....:...........:....................:--.:..x:x..:x.:---------....:..x:.::x::x..:....x......:.x.. 23M11D21M11I190M2D13M9D35M 216/282 76.6% 293/94230402 0.0% 33/282 11.7% 16286755 NA +3016 chr4 + 190214555 39077697 39077696 39077731 35 AAAAAAAAAAAAACAAAAAACAAACAAACAAAAAA chr4 - 94230402 40371512 40371511 40371546 53858857 53858856 53858891 35 AAAAAAAAAAAAACAACAAACAAACAAACAAAAAA ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -1293815 -92936587 +20656 chr4 + 190214555 39080802 39080801 39082176 1375 TTTTAAATTTTTTCCTTTATAT---------AGTTGATTTGATGCTATGGGCTTATAGCTTGTTTTCTGGATGTCATATAGCATTATTTGAGTAGTGAAGTGGTAAAGCATTCACCTCAGCAGAAAAT------TTGGTAATGGTAATTTATTATTCAAAGGAAGGAACTAGAGCATAAAGCAATTTGTCAAGCTTAAAATGCATTTCCTAGTACCATGCACTGTGAGTAACAAATAAAAAAGAAGCAGCAGCATTTATTAATGAACATCAACTCGAATGTGGTCATTGATTTTT--------------------TTTTTCCTA----ATGTGTTCACAGATTGGTGCTCTCCTCTGTCTCAGACTATTTTGCTGCCATGTTTACTAATGATGTCAGAGAGGCAAGACAAGAAGAAATAAAAATGGAAGGTGTAGAACCAAATTCGTTGTGGTCCTTGATCCAGTATGCTTATACAGGTAACGAGTCTGAAAATGTAAATTAAAACCTCTTAGATTTATGTTGTATTATTAGATTTCAGATTTCTGTTTTTAGAAAGCATGCCATAGCTAACAGTTAGTTCTGCTATTGTCATT-ACTACCCTTTGTATTTAACCTGGTGATGAATTAAAATTTCCATACTAAAACCTTTAAAATGGTTATCATAATTAAGTTTTTGAATGGCCCTTTAAAATGTTAATATAAAAATTAAATGAATTACATAGTGTCAAATTTTTGCATTTAAAATTTGAGAGTTGGCCAGGTGCAGTGGCTTATGCCTGTAAATCCCAGCACTTCGGGAAGCCAAGGCAGGACGGATGATCGCTTGAGCCCAGGAGTTCGATGCTGCAGTGAGCCATTGGTTACACCACTGCACTCCAGCCTGGGCAATAGAACAAGACCGTGTCTCAAAAAAAAAAAAAAATTGAGAGTTATACAGGTATATAGTAGACATAAGTTACTAACGTATCATTTTAAAATTCTGAAAATAAGCCATTAGTTTTTATTTTAGTAGATGTC----TCAAGGAGCTAATAATTTTTTCCCCATTTAGTCCTTCTTTTCTTTTTGGGATGTCTT--AAACCATGTAGGTCTGTAATGCA---TGTAATGAGCTCTTATATGGAACCACTACTGTTAACATCAATTATTTTATAAA--ATAAGGTTAATGTAGTTCCATGGCTAATGGAATTTCTTTTTATCATTAA--GGCCGCCTTGAATTAAAAGAAGATAATATTGAGTGCCTGTTATCTACAGCTTGCCTTCTTCAGCTTTCACAGGTTGTAGAAGCATGCTGTAAGTTTTTAATGAAACAGCTTCATCCATCCAACTGTCTTGGAATTCGTTCTTTTGCTGATGCCCAAGGTTGTACAGATTTGCATAAAGTGGCTCACAATTATACTATGGTATG-TATTTTTTGAAG chr4 - 94230402 22805029 22805028 22806138 71424265 71424264 71425374 1110 TTTCAACCATGTTTATTTATATTCAGCTTCCAATTTATGTGGTGTTGTGGG--------TTGTGTCCATGTCGACTATTAAAAGTCACTGAGCTTTGAAAGAGTAATTCATTTACTTCAACAGCAAATGTAGATTCAGTAACAGTACTTCATTATTCATAGAGGGGAACTGGAGTGTGGAGCTATTTGTTAATTCAAAAATGTTGTTCTCACTAC-----ACTGTTTCTTCAAAGGGCAAAATAATGAATG--ATAAATTAATAAACATTGGATTGACAAAGCTTTTTTTCTTTTCCTCTCTTTGTCTCTCTCATTTTCTCCTGCACTATGTGTTCA--GATTGGTTCTCTCCTCCGTTTCGGACTACTTTGCAGCAATGTTTACTAATGACGTAAGGGAAGCAAGACAGGAGGAAATCAAGATGGAGGGCGTGGAGCCAAATGCATTGTGGGCTCTGGTTCAATATGCATATACAGGTAATTAGAGTGAAAATGGGAATT-------------------TTGTCTAATGA------------------------------------------------------ATTGGCCTCCGCTGAGCTTTGTATTCCAT-----------------------TGCTACA-----------------------------TTTCAAGTGCTCTTAGGAAT----------------------TCACATAATTTCTTACTT--ACATTTAAAA------AATTGATCA-------TTGCTGCTACCTG----------------AGGCAACCTGGTCAGA---TATGGTTTCTC-----------------------------------TGATAATACTATATTCTGG--TGGTTAACGAAACA--------TCTCAAGA------------------TTTCAAATGTATCTTG-----ACTGATGAAAAAGGAATCTTAGTAGGTTTC-----------CCTTTCCTTGCATCGTTAGAGATATCAGTTTTGAAAAGCTGATTACCTACTGTCAA---AG----------------GGGATATTTTCCAAGCCTTAT-GTTCTGTCACATAGTCTGTAAATAATTCTTTTATCTGA-----GTTGTGGGGA------ATTTAACAAATCGCAAAAGCAAAATTATATCAT-----------CTACTTCTTAATATTGACAGGTCGCCTTGAATTAAAAGAAGATAACATTGAGTGCCTGTTGTCTACAGCTTGCCTTCTTCAGCTATCTCAGGTTGTAGAAGCGTGCTGTAAATTCCTCATGAAGCAGCTTCACCCGTCCAATTGCCTTGGAATCCGATCTTTTGCTGATGCGCAGGGTTGCACTGACTTGCACAAGGTGGCTCACAATTACACTATGGTACGTTGTTATTTTAAG ...:..x:x.x..:x.......---------.:..x..x..:..:.:....--------....x.:.xx.x:.x.xxx..:x.x.xx:....:xx....:x:....xx....:..:...:...x....------.::....::...x..:........x..:::......:...::.::...x......:..x::x......:xx...::.x...-----.....xxx.xxx..:x:x....x..xx.:::--..xx......:.....:::x.:..xx:x.x.:x..xx:....--------------------...:....:----.........--.......x........:..:..:.....:.....x..x..............:..x..:..:........:..:.....x..:.....:..:..:..:......x.:......x.::..:.:..:.....x...........:x..xx........x:....-------------------....x.x..x.------------------------------------------------------....x.x.:-:..:xx.........:x.:-----------------------.:...x.-----------------------------...x..xx..:...x::...----------------------.:.....:.x..xx.:..--:.........------.:...::..-------.x...xx.:....----------------:..x.:..x:.x...:---x...:.:x..:-----------------------------------.x.:.x:...::.:..::.--...x:..:::....--------......:.------------------..x:.x.x....x.x.-----.:x::.x.xx..x.x...x.xx..::x...-----------.x..xx:..x:..:x.x:x....:..----.::.::....:..x.::.x:.x:.x.---..----------------.....:.:..--..:..x.:.-.x.....x.:::.---.....xx.::....x...xx:.-----::...x::x.------....x.:...--::..::x:..x:.x:.x:...-----------:.x...:...x:...:.--..:.......................:..............:.......................x..x..............:........:..::.x.....:........:..:.....:..:........:..x..............x..:.....:..x..:.....:..:..............:.........:.-.:..x...x... 22M9I20M8D69M6I81M5D31M2D42M20I9M4I9M2D162M19D11M54D9M1I19M23D7M29D20M22D18M2D10M6D9M7D13M16D16M3D11M35D19M2D14M8D8M18D16M5D30M11D26M4I26M3D2M16D10M2I9M1D13M3I22M5D10M6D10M2I21M11D17M2I203M1I12M 736/1056 69.7% 1110/94230402 0.0% 373/1056 35.3% 16275773 NA +7109 chr4 + 190214555 39081101 39081100 39081243 143 AGATTGGTGCTCTCCTCTGTCTCAGACTATTTTGCTGCCATGTTTACTAATGATGTCAGAGAGGCAAGACAAGAAGAAATAAAAATGGAAGGTGTAGAACCAAATTCGTTGTGGTCCTTGATCCAGTATGCTTATACAGGTAA chr4 - 94230402 86076226 86076225 86076368 8154035 8154034 8154177 143 AGGTTGGTTCTCAGTGCAGTGTCTGATTATTTTGCTGCAATGTTCACTAATGATGTACGTGAAGCAAAACAAGAGGAGATCAAGATGGAGGGAGTAGACCCAGATGCGCTGAAGGCTCTGGTGCGTTATGCCTACACAGGTAA ..:.....x...xx:x.x..x..x..:...........x.....:...........xx.x..:....:......:..:..x..:.....:..x.....x...:..x..:..x:.x.::..:.x.:x.....:..:........ 143M 105/143 73.4% 143/94230402 0.0% 0/143 0.0% -46995125 -47235277 +9522 chr4 + 190214555 39083747 39083746 39084021 275 TGTTTTATTCAGGT-----GAAAACATTTGTATGCATTTAGGTCACTCCTGTTGTTTACAGTAGAGGCATGATTGCTGCTTTA-AGGCTTACACAGAAATTAAATTTAAATTAGCTGGATGTTTTTAAAGCTATTTTCATAGCCAATTAGTTGTGTTAGATTT-TTTTTCTCAAGGCCATTATTTAACATTATTCAGTTTTAACAGAGACATGAAATTGAATTCTAATAACAATAAGTAATTTAGAGGCAGCTTGTCTGATTTGA----ATTGTTGCTATGGGAAC chr4 - 94230402 22811809 22811808 22812086 71418317 71418316 71418594 278 TATTTTGTTCAGATCACAGGAATATAGTTCTATGCCTTTTGG--ACT----TTATTTACTTCAGTGGCAAAATTGTTGCTTTTTAGGCTTCGGTGTGGATGAAATTTAAATCAGGTGGAT-TTTAAAAAGCCATTTTCAAAACTAATTAGTTGTGCTAGATGGATTCTTCCCAAGGCC-TTTTTAAATGTTGTTTAGTTCCAATGGAGATGTGAAATTGAATTTTTGTAATAATGAGTAATAGAGAAAAAGGTTCTATAGTTCAAAATGAATGTTGCCATGGAAAC .:....:.....:.-----...x.:.x..x.....x...x..--...----..:.....xx:..x....x:....:......x-......xx:::x::..x..........:..x.....-...xx.....:.......x.:.:...........:.....xx-..:...:.......-..x..x..::..:..:....::..::....::............:.x:...:...:......xx...::x..x..x.x.::..::.----.x......:....:... 14M5I23M2D3M4D32M1I36M1D42M1I14M1D86M4I17M 195/267 73.0% 278/94230402 0.0% 19/267 7.1% 16271938 NA +14377 chr4 + 190214555 39083747 39083746 39084145 399 TGTTTTATTCAGGT-----GAAAACATTTGTATGCATTTAGGTCACTCCTGTTGTTTACAGTAGAGGCATGATTGCTGCTTTA-AGGCTTACACAGAAATTAAATTTAAATTAGCTGGATGTTTTTAAAGCTATTTTCATAGCCAATTAGTTGTGTTAGATTT-TTTTTCTCAAGGCCATTATTTAACATTATTCAGTTTTAACAGAGACATGAAATTGAATTCTAATAACAATAAGTAATTTAGAGGCAGCTTGTCTGATTTGA----ATTGTTGCTATGGGAACCAAATGAAAATGTATAGCAAAATTCAATCTTCAATTTAAATAAATCCCTCCGTAATTTCAGTTGCCTAAAAACTATTCCAAAGGGGGAAAGGTCACAATGCTAGCAAGCGTTTGGTAACATGAT chr4 - 94230402 22807715 22807714 22808114 71422289 71422288 71422688 400 TATTTTGTTCAGATCACAGGAATATAGTTCTATGCCTTTTGG--ACT----TTATTTACTTCAGTGGCAAAATTGTTGCTTTTTAGGCTTCGGTGTGGATGAAATTTAAATCAGGTGGAT-TTTAAAAAGCCATTTTCAAAACTAATTAGTTGTGCTAGATGGATTCTTCCCAAGGCC-TTTTTAAATGTTGTTTAGTTCCAATGGAGATGTGAAATTGAATTTTTGTAATAATGAGTAATAGAGAAGCAGCTTCTATAGTTCAAAATGAATGTTGCCATGGAAACTGCATAGAAATACATAGACCAATTGAATCGTCAATTAAAATAAATCCCCAAGTAATTTCATTTGTTTAAAAGCTGTTTGAAAGCAGAAAATATT-CAGCACTATTAAGTG-CTGGCCACTTGAT .:....:.....:.-----...x.:.x..x.....x...x..--...----..:.....xx:..x....x:....:......x-......xx:::x::..x..........:..x.....-...xx.....:.......x.:.:...........:.....xx-..:...:.......-..x..x..::..:..:....::..::....::............:.x:...:...:......xx...:.......x.x.::..::.----.x......:....:...::x..::....::....xxx....x....x......x...........:xx.........x...::.....:..:..:x....x:.:...x:.:-..:::...x:...:.-:...:x..x.... 14M5I23M2D3M4D32M1I36M1D42M1I14M1D86M4I111M1D15M1D13M 281/389 72.2% 400/94230402 0.0% 21/389 5.4% 16276032 NA +16355 chr4 + 190214555 39086499 39086498 39086731 233 TATTTCTTCCCTCT---AGGAGCATTTCATGGAAGTAATCAGAAACCAGGAATTTGTATTATTACCAGCCAGCGAAATTGCAAAGCTCTTGGCTAGTGATGACATGAACATTCCTAATGAGGAGACAATATTGAATGCACTTCTTACTTGGGTCCGTCATGATTTGGAACAGAGACGGAAAGATCTAAGTAAACTTTTGGCTTATATTAGGCTACCTCTTCTTGCACCACAGGTAA chr4 - 94230402 22816137 22816136 22816372 71414031 71414030 71414266 236 TATTTCTTTTCTTTTTCAGGAAAATTTCATGGAAGTAATTAGAAACCAGGAATTTCTATTGCTGCCAGCCACTGAAATTGCAAAGCTTTTAGCAAGTGATGACATGAATATTCCTAATGAAGAAACTATATTGAATGCACTACTTACATGGGTTCGACATGATTTGGAACAGAGAAGGAAAGATCTGAGTAAACTCCTGGCTTACATTAGACTGCCTCTACTTGCTCCACAAGTAA ........::..:.---....:x................:...............x....::.:.......x:..............:..:..x..............:...........:..:..x..............x.....x.....:..x..................x..........:........::.......:.....:..:.....x.....x.....:.... 14M3I219M 200/233 85.8% 236/94230402 0.0% 3/233 1.3% 16270362 NA +3556 chr4 + 190214555 39086953 39086952 39087068 116 CAGGCT---GGAGTGCAGTGGCATGATCTCAGGTCACTGCAACCTCCGCCTCCCCAGTTCAAGTTATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCATGCCACCATG chr4 - 94230402 18197091 18197090 18197206 76033197 76033196 76033312 116 CAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ......---..x:::..x:x..x..::x...x..:-..:..:..:xx:x..:.:x:........xx...x.xx.x........:............:......x.....--....::.. 6M3I26M1D73M2D8M 78/113 69.0% 116/94230402 0.0% 6/113 5.3% 20889862 NA +14443 chr4 + 190214555 39096617 39096616 39096907 291 AACTATGTCATTTTTTTCTGTAAACCCTACCATTTTCTTAGTCATTCAGTATACATACCTACTATTCTTTTCT--AGTTCCTGGCAGACATGGAAAATAATGTACTTTTTCGGGATGATATAGAATGTCAGAAACTCATTATGGAAGCAATGAAGTACCATTTATTACCAGAGAGACGACCCATGTTACAAAGTCCTCGGACAAAACCTAGGAAGTCAACTGTTGGTACATTATTTGCAGTTGGGGGAATGGATTCAACAAAAGGTATCAAATAATCT----TTTATTTGGGGAGGG chr4 - 94230402 22820084 22820083 22820371 71410032 71410031 71410319 288 AATTTTGTTTTTATACTCTGTGCAGCTTA---------TAGCAATTCAGCTTGTTTAATCTTCAATCTTTTTTGCAGTTTCTGGCAGATATGGAAAATAATGCACTCTTTAGGGATGACATTGAGTGTCAGAAACTCATTATGGAAGCAATGAAGTACCATCTGTTGCCAGAGAGACGACCTATGTTGCAAAGTCCTCGCACCAAACCTAGAAAATCTACAGTGGGAGTGTTGTTTGCAGTTGGAGGAATGGATGCAACAAAAGGTCTTGGCTTATATAATGATTAGTTGATGAGGG ..:.x...:x..x.x:.....:x.x.:..---------...:x......:x.::x..x::x::.x......:.--....:........:.............:...:...x.......:..x..:....................................:.:..:..............:.....:...........x..x........:..:..x..x..x..x:::..:...........:.........x...........x.:::x.x..x.----x...x...:x..... 29M9D35M2I203M4I15M 218/282 77.3% 288/94230402 0.0% 15/282 5.3% 16276533 NA +10440 chr4 + 190214555 39096652 39096651 39096881 230 TCTTAGTCATTCAG-TATACATAC-----CTACTATTCTTTTCT-AGTTCCTGGCAGACATGGAAAATAATGTACTTTTTCGGGATGATATAGAATGTCAGAAACTCATTATGGAAGCAATGAAGTACCATTTATTACCAGAGAGACGACCCATGTTACAAAGTCCTCGGACAAAACCTAGGAAGTCAACTGTTGGTACATTATTTGCAGTTGGGGGAATGGATTCAACAAAAGGTA chr4 - 94230402 86081045 86081044 86081281 8149122 8149121 8149358 237 TTTTAATGATTTAGATACACATAAGATCATCACTTTTCATTTCTTAGTTACTAGCCGATCTAGAAAATAGTCCAATGTTTGCAGACGACCTAGAATGCCAGAAACTTCTCATGGAGGCTATGAAGTACCATCTCCTACCAGAAAGACGGTCCATGATGCAGAGCCCTCGAACAAAGCCTAGGAAGTCTACAGTGGGTGCACTTTATGCTGTAGGAGGTATGGATGCCACTAAAGGTA .:...:.x...:..-..:.....x-----::...x...x.....-....x..:..x..:x.:.......:.x:.x.x...xx:..:..:x.......:........:x.:.....:..x............:.x:.......:.....::.....x.:..:..:.....:.....:...........x..x..x...:..:.x.x...x..x..:..x......x.x..x....... 14M1I9M5I15M1I192M 171/230 74.3% 237/94230402 0.0% 7/230 3.0% -46984393 -47246009 +3044 chr4 + 190214555 39101845 39101844 39101893 49 CAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACAC chr4 - 94230402 70707586 70707585 70707634 23522769 23522768 23522817 49 CAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ..:.....x.::....x:x...............:..........::.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -31605741 -62624661 +3035 chr4 + 190214555 39101846 39101845 39101894 49 AAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACA chr4 - 94230402 70707591 70707590 70707639 23522764 23522763 23522812 49 AAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ...x.::....::..................:........::..x.x.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -31605745 -62624657 +3145 chr4 + 190214555 39101846 39101845 39101892 47 AAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 - 94230402 60979354 60979353 60979400 33251003 33251002 33251049 47 AAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ....x...x.....x.x........:.:.....:............. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -21877508 -72352894 +3097 chr4 + 190214555 39101847 39101846 39101916 70 AAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACATATACACACACACACATATA chr4 - 94230402 15682753 15682752 15682822 78547581 78547580 78547650 70 AAAAAAAAAAAAGTCTTATGTGGATGAATATGTACTTACACATACATACATTTACACCCTCACAAGCATA ............:x:x...:.:x..:x....::..x:.....:...:....x.....x.x....x::... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 23419094 NA +3566 chr4 + 190214555 39101865 39101864 39101968 104 TATATATATATATACACACACACACACACACATATACACACACACACATATATATATAC----ATATATACACACATATATACACACATATATATACACACACATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x..:.....:.:.....x.x::.::x::...:..:....x:..:..----....:.:x::.......x.:..:.x:.:.x.x.......::.... 59M4I45M 66/104 63.5% 108/94230402 0.0% 4/104 3.8% -34019237 -60211165 +3151 chr4 + 190214555 39101890 39101889 39101977 88 ACACACATATACACACACACACATATATATATACATATATACACACATATATACACACATATATATACACACACATATATATGTATAC chr4 - 94230402 4417349 4417348 4417436 89812967 89812966 89813054 88 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC ...:.:...:...........x:x.:...:::.::x:x:.x::.....:...xx.x:...x..x...:.....:..x...x.:...:. 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 34684541 NA +3093 chr4 + 190214555 39101892 39101891 39101976 85 ACACATATACACACACACACATATATATATACATATATACACACATATATACACACATATATATACACACACATATATATGTATA chr4 - 94230402 4417349 4417348 4417433 89812970 89812969 89813054 85 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATA ...:.................x:x.:...::...:x:x::x::..:..:..:xx.x::..x..x.:.:........x...x.... 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 34684543 NA +3306 chr4 + 190214555 39101903 39101902 39101964 62 CACACACACATATATATATACATATATACACACATATATACACACATATATATACACACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x.:::...:.x..::.....:....:...:......x.......:x...:...:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 31505491 NA +3237 chr4 + 190214555 39101910 39101909 39101971 62 ACATATATATATACATATATACACACATATATACACACATATATATACACACACATATATAT chr4 - 94230402 17520749 17520748 17520810 76709593 76709592 76709654 62 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT ...x.......x...:.x.......:.:..:.:x.::.x.:....x.....::......... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 21581161 NA +17040 chr4 + 190214555 39103255 39103254 39103518 264 TATTTACATAACTTCTATATATTACTATGAAGGAGCAACAAGCATTGAAAAGTATGATCTCCGTACAAATATGTGGACTCCAGTAGCAAATATGAATGGGAGGAGGCTACAGTTCGGTGTTGCAGTGCTAGATGACAAACTGTATGTGGTTGGAGGAAGAGATGGACTGAAGACTTTGAATACTGTAGAGTGCTACAACCCCAAAACAAAAACTTGGAGTGTGATGCCACCTATGTCCACACATAGACATGGCCTTGGTAAGTA chr4 - 94230402 22821273 22821272 22821536 71408867 71408866 71409130 264 TGTTTTCCTAACTTGTGGTTGTTGTCATTCAGGAGCTACGAGCATTGAAAAGTATGAACTTCGTACCAACATGTGGACTCCTGTTGCAAACATGAACGGGCGAAGATTACAGTTTGGAGTTGCAGTCTTAGATGATAAATTGTATGTTGTTGGTGGCAGAGACGGACTGAAAACCTTGAATACGGTGGAGTGCTACAACCCTAGAACAAAAACTTGGAGTGTAATGCCACCTATGTCCACACATCGTCATGGTCTTGGTATGTA .:...x.x......x.:xx.:..:::..xx......x..:.................x..:.....x..:...........x..x.....:.....:...x.:..::.......:..x........x:.......:...:.......x.....x..x.....:........:..:........x..:..............:.:..................:.....................x.x.....:.......x... 264M 216/264 81.8% 264/94230402 0.0% 0/264 0.0% 16281982 NA +10806 chr4 + 190214555 39103273 39103272 39103516 244 ATATTACTAT-----GAAGGAGCAACAAGCATTGAAAAGTATGATCTCCGTACAAATATGTGGACTCCAGTAGCAAATATGAATGGGAGGAGGCTACAGTTCGGTGTTGCAGTGCTAGATGACAAACTGTATGTGGTTGGAGGAAGAGATGGACTGAAGACTTTGAATACTGTAGAGTGCTACAACCCCAAAACAAAAACTTGGAGTGTGATGCCACCTATGTCCACACATAGACATGGCCTTGGTAAG chr4 - 94230402 86083875 86083874 86084123 8146280 8146279 8146528 249 ATACTACTATCTTTAATAGGCACCACTACAATTGAAAAGTATGACCTTAGGACTAACAGCTGGATACAAATTGGTACCATGAATGGCAGACGATTACAGTTTGGAGTTGCAGTAATTGACAACAAGCTCTACATTGTGGGAGGAAGAGATGGTCTGAAAACCTCCAATATTGTTGAATGTTTCAACCCTATCACCAAAGTCTGGACTGTAATGCCTCCTATGTCAACACACAGACATGGCTTAGGTAAG ...:......-----:x...x:.x..x.xx..............:..:x.x..x..:.xx....:x.x.:.x.xx.x:........x..:x.::.......:..x........:x.x..::....:..x..::.x..x..............x.....:..:.:x....:...x..:..:.x......:.xx..x...:::....x...:.....x........x.....:.........:.x...... 10M5I234M 176/244 72.1% 249/94230402 0.0% 5/244 2.0% -46980602 -47249800 +3306 chr4 + 190214555 39105628 39105627 39105751 124 GTATTTATATGTTT----ATATATATACACATATAAAATGTGTATATGCACATATATACATATAAATAACATGCATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACAC chr4 - 94230402 56755306 56755305 56755433 37474970 37474969 37475097 128 GTACTTCTATATTCTCTAACATATACAGGCAGCTAACATGCTCCTACACAGTTCTCTGCAGAATTTCAAAAAGCATGTTTTTCCAAAGCCAAAGATTTGTGTGTGCATATGTGTACACACACACACAC ...:..x...:..:----.:.....:.x:..xx...x...:x:x..::..xx.x.x.:..x.xxxx:..x.x.....:x.x.::.x.xx..x.x..x.......::......:............... 14M4I110M 80/124 64.5% 128/94230402 0.0% 4/124 3.2% -17649678 -76580724 +3506 chr4 + 190214555 39105629 39105628 39105763 135 TATTTATATGTTTATATATATA---------CACATATAAAATGTGTATATGCACATATATACATATAAA--TAACATGCATGCATAT-------TTATATACACATATATGT--------------GTGTATATATGTATACACACACACACACACACACACACAC chr4 - 94230402 14964725 14964724 14964884 79265519 79265518 79265678 160 TACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAA-------ATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.:...x:.x....x...:.---------...x..:.:..-------.....:x.:..:..x:.x...--:..x:.....x:....-------..:.:x.....x......--------------......:...:..:.xx........::............. 22M9I11M7D21M2I16M7I18M14I40M 95/128 74.2% 160/94230402 0.0% 39/128 30.5% 24140904 NA +3305 chr4 + 190214555 39105642 39105641 39105759 118 ATATATATACACATATAAAATGTGTATATGCACATATATACATATAAATAACATGCATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACAC chr4 - 94230402 14964767 14964766 14964884 79265519 79265518 79265636 118 ATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..::..x.::...:x:....x.xxx.x:....:x......x.x:.:xxxx:x.::..x::..:...:::.:::..:.::...:........::xx:.......::............. 118M 69/118 58.5% 118/94230402 0.0% 0/118 0.0% 24140875 NA +3149 chr4 + 190214555 39105692 39105691 39105781 90 ACATGCATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACACACACACACACACACATAAAATC chr4 - 94230402 8395788 8395787 8395877 85834526 85834525 85834615 90 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACC .::..::.:::.:.x:...x...::...x.:::.:.:...::x..:.:xx.:.................x.....x.::x.:.x....:. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 30709904 NA +4449 chr4 + 190214555 39105693 39105692 39105787 95 CATGCATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACACACACACACACACACATAAAATCTCCAAA chr4 - 94230402 8395787 8395786 8395881 85834522 85834521 85834616 95 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAA ....::..:..:.x.::...x....:...x.:::...:....:x....:xx.:.................x.....x.::x......xx:..... 95M 67/95 70.5% 95/94230402 0.0% 0/95 0.0% 30709906 NA +3530 chr4 + 190214555 39105694 39105693 39105760 67 ATGCATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...::......xx:..:..:x:.:......:..:x..:..xx...................x..... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 30709898 NA +4107 chr4 + 190214555 39105697 39105696 39105778 82 CATGCATATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACACACACACACACACACATAAA chr4 - 94230402 8395787 8395786 8395868 85834535 85834534 85834616 82 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAA ....::.:.x.:.:.:..:.x.:....:.x..:........:.x:...:xx.:.................x.....x..:.. 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 30709910 NA +3253 chr4 + 190214555 39105703 39105702 39105774 72 TATTTATATACACATATATGTGTGTATATATGTATACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.x...:.:::....x.::...:.x..:..:.:..::.x:...:xx.:.................x..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 30709912 NA +3142 chr4 + 190214555 39105707 39105706 39105755 49 TATATACACATATATGTGTGTATATATGTATACACACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC .:.:.:..::.:.....:.....x.:...:.............:..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 13712447 NA +12848 chr4 + 190214555 39107504 39107503 39107767 264 TTAAAATGTGATTTTTAAGACA------GCAGCCAATCTGAAGTCGTTA-ATTGTTTCCTGTCTCCTCATAGGTGTGGCTGTACTGGAAGGTCCCATGTATGCCGTAGGAGGACATGATGGCTGGAGCTATCTGAACACAGTGGAAAGATGGGACCCTCAGGCTCGCCAGTGGAATTTTGTTGCCACTATGTCTACCCCTAGGAGTACAGTAGGTGTGGCAGTACTAAGTGGAAAGT-----AAGGAAATATTTAAAGTTCCATTTAAAATGCAAT chr4 - 94230402 22821721 22821720 22821991 71408412 71408411 71408682 271 TTAAAATAT--TTTTTGACGCACACTGAACTGTCAATAGGAAAATGTAATCTTTTTTTCTTTCTTTTTTTAGGAGTAGCTGTATTGGAAGGCCCCATGTATGCTGTGGGAGGACATGATGGCTGGAGCTACCTGAATACAGTAGAAAGATGGGATCCACAGGCTCGTCAGTGGAACTTCGTAGCTAGTATGTCAACTCCAAGGAGCACTGTTGGTGTAGCAATATTAAATGGAAAGTATGTGAAGGCAACTTCCAA---TTTATCTAATATGTAAT .......:.--.....:.x:..------:.x.:....xx...:x:..x.-x..x...:..x...::.:x....x..:......:.......:...........:..:.......................:.....:.....:...........:..x........:........:..:..x..:.x......x..:..x.....:..x..x.....:...:..:...:........-----....x..:x.::..---.::..:...x...:... 9M2D11M6I21M1I187M5I14M3D17M 201/259 77.6% 271/94230402 0.0% 17/259 6.6% 16285783 NA +9822 chr4 + 190214555 39107555 39107554 39107757 203 CTGTCTCCTCATAGGTGTGGCTGTACTGGAAGGTCCCATGTATGCCGTAGGAGGACATGATGGCTGGAGCTATCTGAACACAGTGGAAAGATGGGACCCTCAGGCTCGCCAGTGGAATTTTGTTGCCACTATGTCTACCCCTAGGAGTACAGTAGGTGTGGCAGTACTAAGTGGAAAGTAAGGAAATATTTAAAGTTCCATTT chr4 - 94230402 86085693 86085692 86085895 8144508 8144507 8144710 203 CTCTATTCTTTAAGGAGTAGCAATGCTAGAAGGACCAATGTATGCTGTTGGTGGCCATGATGGGTGGAGTTACCTGAACACCGTAGAAAGATGGGACCCTCAAGCCCGGCAATGGAATTATGTTGCTAGCATGTCCACCCCCCGAAGCACTGTAGGGGTTGCAGCGTTAAATAGCAAGTATGTCAACAGGAAAAACTCTCTTT ..x.x.:..:xx...x..:..x:.:..:.....x..x........:..x..x..x........x.....:..:........x..:.................:..:..x..:.......x......:.x:.....:.....:x.:..:..x.....x..x....:::...:.:.x.....x.xx..:.xxx...::..:x... 203M 147/203 72.4% 203/94230402 0.0% 0/203 0.0% -46978138 -47252264 +3011 chr4 + 190214555 39109617 39109616 39109667 51 ATTTCTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTGGAGGGGGTGGTGGGG chr4 - 94230402 37235827 37235826 37235877 56994526 56994525 56994576 51 ATTCTTCTTTTTTTTTTGTTGTTTTGTTTTGTTTTGGTGGTGGTGGTGGGG ...::.:...:......x..x....x....x......x..x.......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 1873790 NA +3180 chr4 + 190214555 39113010 39113009 39113102 93 CTTTTTG----CAGACTTTATGCAGTTGGTGGTCGTGATGGAAGTTCTTGTCTCAAATCAGTAGAATGTTTTGATCCTCATACTAATAAGTGGACAC chr4 - 94230402 22829766 22829765 22829862 71400541 71400540 71400637 97 CTTCTTGGTGACAAGTTGTATGCTGTTGGAGGATATGATGGTCAAACATACCTTAACACAGTGGAGTCTTACGATCCTCAGACAAATGAATGGACAC ...:...----..:::.x.....x.....x..x::......xx:xx.x.::..:..xx....:..:.x..x:........x..x...:.:....... 7M4I86M 63/93 67.7% 97/94230402 0.0% 4/93 4.3% 16283244 NA +15281 chr4 + 190214555 39113014 39113013 39113249 236 TTGCAGACTTTATGCAGTTGGTGGTCGTGATGGAAGTTCTTGTCTCAAATCAGTAGAATGTTTTGATCCTCATACTAATAAGTGGACACTGTGTGCACAGATGTCAAAAAGGAGAGGTGGCGTAGGAGTGACGACCTGGAATGGACTGCTGTATGCTATAGGGGGGCACGATGCTCCCGCATCCAACTTGACTTCCAGACTCTCAGACTGTGTGGAAAGGTAATTTCCTGGGAAGA chr4 - 94230402 22828238 22828237 22828473 71401930 71401929 71402165 236 TTATAGGCTTTATGCAGTTGGTGGTCGAGATGGAAGTTCTTGTCTTAAGTCGGTAGAATGTTTTGATCCTCATACAAACAAATGGACCCTCTGTGCTCAAATGTCAAAAAGAAGAGGTGGTGTAGGTGTAACTACGTGGAATGGATTCTTGTATGCCATCGGTGGTCATGATGCCCCAGCATCAAACTTAACATCCAGGTTGTCAGACTGCGTAGAAAGGTAATATCCCAGTGAAA ..::..:....................x.................:..:..:.......................x..:..:.....x..x.....x..:...........:........:.....x..:..x..x.........:.x:.......:..x..x..x..:.....:..x.....x.....:..x.....::.x........:..:..........x...::.x:.:. 236M 192/236 81.4% 236/94230402 0.0% 0/236 0.0% 16284776 NA +3185 chr4 + 190214555 39113017 39113016 39113101 85 CAGACTTTATGCAGTTGGTGGTCGTGATGGAAGTTCTTGTCTCAAATCAGTAGAATGTTTTGATCCTCATACTAATAAGTGGACA chr4 - 94230402 86089379 86089378 86089463 8140940 8140939 8141024 85 CAGACTATATGCTGTTGGTGGCTATGATGGCCACACATACCTGGATACTGTGGAGTCCTATGATGCTCAAAATAACGAGTGGACA ......x.....x........:::......xx::x.x.::..x:.xx.x..:..:.x:.x....x....x.x...::........ 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% -46976362 -47254040 +11663 chr4 + 190214555 39113017 39113016 39113236 220 CAGACTTTATGCAGTTGGTGGTCGTGATGGAAGTTCTTGTCTCAAATCAGTAGAATGTTTTGATCCTCATACTAATAAGTGGACACTGTGTGCACAGATGTCAAAAAGGAGAGGTGGCGTAGGAGTGACGACCTGGAATGGACTGCTGTATGCTATAGGGGGGCACGATGCTCCCGCATCCAACTTGACTTCCAGACTCTCAGACTGTGTGGAAAGGTAA chr4 - 94230402 86088244 86088243 86088463 8141940 8141939 8142159 220 CAGACTATACGCAGTTGGTGGACGAGATGGGAGCTCCTGCTTAAAATCAATGGAATGTTTTGATCCACATACAAACAAGTGGAGCCTATGTGCTTCGATGTCAAAGAGAAGAGGTGGTGTTGGTGTTGCAACATACAATGGGTTTTTATATGCTGTGGGAGGTCATGATGCACCTGCTTCCAACCACTGCTCTCGACTTTCCGACTGTGTAGAAAGGTAA ......x..:...........x..x.....:..:..:..::.x......:.:..............x.....x..:.......xx..:.....x:x.........:..:........:..x..x..x:.:..x.:x.....::.x:.:......:.:..:..x..:.....x..:..x......:xxxx:..:x....:..x........:......... 220M 164/220 74.5% 220/94230402 0.0% 0/220 0.0% -46975227 -47255175 +13259 chr4 + 190214555 39115145 39115144 39115336 192 AAATTTTCTTACAGATATGATCCCAAAACAGACATGTGGACTGCAGTAGCATCCATGAGCATCAGCAGAGATGCAGTGGGGGTCTGTTTACTTGGTGATAAGTTATATGCTGTTGGGGGGTATGATGGACAGGCATACCTTAATACTGTGGAGGCTTATGATCCCCAGACAAATGAGTGGACCCAGGTATGG chr4 - 94230402 22829679 22829678 22829870 71400533 71400532 71400724 192 AAATTATCTTTTAGGTATGATCCAAAAACAGATATGTGGACTGCTGTGGCTTCGATGAGCATTAGCAGAGATGCAGTGGGAGTATGCCTTCTTGGTGACAAGTTGTATGCTGTTGGAGGATATGATGGTCAAACATACCTTAACACAGTGGAGTCTTACGATCCTCAGACAAATGAATGGACACAGGTATAG .....x....x:..:........x........:...........x..:..x..x........:.................:..x..::.x........:.....:...........:..:........x..::..........:..x......x....:.....:...........:.....x.......:. 192M 161/192 83.9% 192/94230402 0.0% 0/192 0.0% 16285466 NA +8493 chr4 + 190214555 39115153 39115152 39115333 181 TTACAGATATGATCCCAAAACAGACATGTGGACTGCAGTAGCATCCATGAGCATCAGCAGAGATGCAGTGGGGGTCTGTTTACTTGGTGATAAGTTATATGCTGTTGGGGGGTATGATGGACAGGCATACCTTAATACTGTGGAGGCTTATGATCCCCAGACAAATGAGTGGACCCAGGTA chr4 - 94230402 86089289 86089288 86089469 8140934 8140933 8141114 181 TTTCAGATATGACCCTAAAACAGACACTTGGACAACAGTGGCTCCGTTGAGTGTACCTCGGGATGCTGTTGGAATTTGTCCTCTGGGAGACAGACTATATGCTGTTGGTGGCTATGATGGCCACACATACCTGGATACTGTGGAGTCCTATGATGCTCAAAATAACGAGTGGACAGAGGTA ..x.........:..:..........:x.....x:....:..x:.xx....::.xxx:x.:.....x..x..::.:...::x..x..x..:.:::.............x..x........x..x:.......x:...........x.:......x.:..:.xx..:........xx..... 181M 130/181 71.8% 181/94230402 0.0% 0/181 0.0% -46974136 -47256266 +4931 chr4 + 190214555 39120981 39120980 39121116 136 TCCAATACATATCTCTTTTTCCTTTTTAGGTTGCTCCACTGTGCCTAGGAAGAGCTGGAGCTTGTGTTGTGACTGTAAAATTATAATTTAGTGCCCCGTTTTCTACATGAAGACACCGTCTTCCTTTATTAATTTA chr4 - 94230402 22830188 22830187 22830314 71400089 71400088 71400215 127 TCTCACAAATGTGTATTTTTGCTTAC-AGGTTGCACCATTGTGCTTAGGAAGAGCTGGAGCATGTGTTGTGACTGTGAAACTATAGATT--------GTTTTCTTTGAGAAGGTGATTTTCTCCACTACGGACTCA ..:x.:.x..:.x.x.....x...x:-.......x...:.....:................x..............:...:....:x..--------.......x::x....:::x:x.::...x:..:x:.:.:. 26M1D62M8D39M 90/127 70.9% 127/94230402 0.0% 9/127 7.1% 16290793 NA +3022 chr4 + 190214555 39145530 39145529 39145594 65 AGTTTTTTGAGGTTTTTTGTTTGTTTGTTTTGCTTTGTTTTTGTTTTTGTTTTTGTTTGAGACAG chr4 - 94230402 6996634 6996633 6996698 87233705 87233704 87233769 65 AGTTTTGTGTGGTTTTTTGTTTGCTTGCTTTTTTTTCTTTTTGCTTTCCCCCTAAGTTTAGAAAG ......x..x.............:...:...x:...x......:...:x:::.x:x..x...x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 32148896 NA +3588 chr4 + 190214555 39177997 39177996 39178082 86 GAAACGATTCTGAATTTTTTTTTTCTATTTTGAAGATACTTTTATTTTTAAGGAGGAATTAGTTTCTCTTCAGATGTTCATTTTTG chr4 - 94230402 13173773 13173772 13173856 81056547 81056546 81056630 84 GAAACAATT--GAAGTCTTTCATTCTATTTTGAAGATGTTTGTTTCTTTGAAGAAGGAGTAGTCTTTCTGCAGATCTAAGCTCTTG .....:...--...x.:...:x...............::..x.x.:...:.:..:.:.x....:.:...x.....x.xx::.:... 9M2D75M 60/84 71.4% 84/94230402 0.0% 2/84 2.4% 26004224 NA +5065 chr4 + 190214555 39185719 39185718 39185823 105 TTTTTAGCGTATTTTCTCACTGCTAGAAAAGACTTGGCTTGGCGCACCAATACAGTTTGCCTGGCAAAAAACATCAGGAAACTACCTTGCAGTAACAGGGTAAGA chr4 - 94230402 22833292 22833291 22833396 71397007 71397006 71397111 105 TCTCTAGCAAGTATTCAGTCTATTAGAAAAAGCTTGGTCTGGTTCCTCAGTGCAATTTGCTTGGCAGAAAACTTTGGGACATTTCCTTGCTGTAACAGGGTAAGA .:.:....:x:.x...xxx..::.......::.....::...:x.x:..:.:..:.....:.....:.....x.::...x.:.x......x.............. 105M 74/105 70.5% 105/94230402 0.0% 0/105 0.0% 16352427 NA +6837 chr4 + 190214555 39186484 39186483 39186627 144 AAAAAAAAAAAAAAAAAAAAAGTAAATCATATCTTTATGTTCTGATTGCTTTCAGAGCTGATTATATTGTGAAAATCTTTGATCGCCATGGTCAAAAAAGAAGTGAAATTAACTTACCTGGGTAAGTACAGAAGTAGATTTAAA chr4 - 94230402 22833592 22833591 22833732 71396671 71396670 71396811 141 AAGAACAGACAGATGAAGGAAGGGAATCAT---TTTATGTGTTAATCTTTTTTAGAGGTGATCACACTGTGAAAATTTTTGATCGTCATGGTCAGAAGAGAAACGAAATTACTTTACCAGGGTAGGTACTCAGATGAGTTTAAA ..:..x.:.x.:.x:..::...x:......---.......x:.:..:x:...:....x....:.:.:.........:........:........:..:....::.......x:.....x.....:....xx.::.:::...... 30M3D111M 102/141 72.3% 141/94230402 0.0% 3/141 2.1% 16352892 NA +9651 chr4 + 190214555 39189610 39189609 39189868 259 TACTTTAAAAAACTGTATAGTGGTATTTTGCTCTCTTTTTTAAAAGTAACTGTGTTGCCATGGATTGGGATAAAGATGGAGATGTCCTAGCAGTGATTGCTGAGAAATCTAGCTGCATTTATCTTTGGGATGCCAACACAAATAAGACCAGCCAGTTAGACAATGGCATGAGGTAAGATAACTT---------TTTAATTTTTTAAAGCTTCACTTAGAAACATGAATATTTGTAGG-----------TTTGGTGCTA------ACAATTCTTTACTACTTTCAT chr4 - 94230402 22835324 22835323 22835595 71394808 71394807 71395079 272 TAATTAACAAAACTCTACA----TGTTTTTCCTTC---------AGTAACTGTGTTGCTATGGATTGGGATAAGGATGGAGATACCTTAGCAATAATCGCAGACAGATGTAGTGCCATTTTTCTCTGGGATGCCAACACAAGCAAAACAAGCCAATTAGACAGTGGCATGAGGTAAGAAAGGTTTTTTTGTTGTTTTTTTTTTTAGAGATGTTTTTGAAGACTCAGACCGCTGTGAGCTGCAGCAGCTTTTTCTATTACCTCATACAACTTTTTGTTACTTCCAT ..x..x.x......x..:.----.:....x.::..---------..............:..............:.........::.:.....:.:..:..x..x.:..x...:xx.....x...:................::..:..x.....:.......:...............x.:x..---------...xx.......:..x.x:x:..::.:..x:::.:xx:...::.-----------...xx.::..------....:.:...::.....:... 19M4D12M9D140M9I44M11I10M6I21M 181/246 73.6% 272/94230402 0.0% 39/246 15.9% 16354286 NA +6818 chr4 + 190214555 39194519 39194518 39194662 144 AGTAATTTATATCTTAATGTTACAGGGATCAAATGTCTTTCCTTCTTTGGTCAAAAGTTGGAAGTTTCCTGGCTGTTGGAACTGTTAAAGGAAATTTGCTTATTTATAATCATCAGACATCTCGAAAGATTCCTGTCCTTGGTA chr4 - 94230402 22836087 22836086 22836228 71394175 71394174 71394316 142 AGTAATCATTTTCTTTATTTTA--GGGATTCATTGTCTTTCTTATTATGGTCTCGAGTAGGAGCTTTACTCGCTGTTGGAACAACTAAGGGAAACTTACTTATATATAACCGCCAGACTTCTCGCAAGATTCCTATTCTTGGTA ......:xx.x....x..x...--.....:x.x........:.x:.x.....xx:...x...:x...x..x...........x::...:.....:..:.....x.....:.::.....x.....x.........:.:....... 22M2D120M 107/142 75.4% 142/94230402 0.0% 2/142 1.4% 16358432 NA +8579 chr4 + 190214555 39199422 39199421 39199599 178 CAGATTTTTTTCTTTGAGAAATCCACATGT-CTGTATAAAAATAATCTCTTTTTCAGGAAAACATACTAAGAGAATCACTTGTGGATGTTGGAATGCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAGGTGACACGATAAGACAGGTAATA chr4 - 94230402 22836625 22836624 22836797 71393606 71393605 71393778 173 CAGATTTTTTGTTTTG-----TTCATCTTTGTTGTATAGGTTTG-TTTCTTTTCCAGGTAAGCACACTAAGCGGATTACCTGTGGTTGTTGGAGCACTGAAAACCTCCTGGCTCTAGGTGGTGAAGACAAAATGATTACTATAAGCAATCAGGAAGGGGATACTATAAGACAGGTAGTA ..........x:....-----.:..:x.x.-:......::xx.:-.:......:....x..:..:......x.:..:..:.....x.......:::.x.....:..x..x...:.............:...........x:.x..:...........x..:..x............:.. 16M5D9M1I13M1D134M 133/172 77.3% 173/94230402 0.0% 7/172 4.1% 16362797 NA +3360 chr4 + 190214555 39203075 39203074 39203135 61 TCTTTAATTAAATCCTTTTTCCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTGAGACA chr4 - 94230402 16579496 16579495 16579556 77650847 77650846 77650907 61 tctTCAATAATATCTACTTCCCTTTTTCTGATTCTTTCTCTTTCTTCCTTTCTTTGAGGCA ....:...x.x...:x:..:.........xx........:...:..::...:......:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 22623579 NA +3126 chr4 + 190214555 39203075 39203074 39203124 50 TCTTTAATTAAATCCTTTTTCCTTTTTCTTTTTCTTTCTTTTTTTTTTTT chr4 - 94230402 33215687 33215686 33215736 61014667 61014666 61014716 50 TTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCT .:...xx:.:..x.........................:.:......::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 5987388 NA +4451 chr4 + 190214555 39203628 39203627 39203768 141 TTTTACTCCTTTAGACACAAGTGAGATCAGAGCCTAGCAACATGCAGTTTTTCTTGATGAAGATGGATGACCGAACCTCTGCTGCTGAAAGCATGGTAAGAATTCTAATCAAATCCACGTGCAAATCATTTGGGTAATTTT chr4 - 94230402 22838005 22838004 22838145 71392258 71392257 71392398 141 TTTCTTTCTTGCAGACCTCAGTGAGTTCAGATCCCAGTGATATGCAGTTCTCAGTTATGAAGACTGATGAAAGAATATCAACCAGGGAAAGCACAGTAAGAAGTCGATACAAAATCCTGCAAAAAGTGTTAATGTAATGTT ...:x:..:.x:....x:x......x.....x..:..::.:........:.:xx.x.......:x.....xx...:x..x:.::xx.......::.......x..x.xx....x:.x:.::x...x::..x:x.....x.. 141M 89/141 63.1% 141/94230402 0.0% 0/141 0.0% 16365623 NA +7012 chr4 + 190214555 39205141 39205140 39205269 129 TCTTTTC------TGGCAGATAAGTGTGGTGCTTGGCAAGAAAACTTTGTTTTTTTTAAATCTGAATGAACCAGATAACCCAGCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATAATTGGTA chr4 - 94230402 22841019 22841018 22841153 71389250 71389249 71389384 135 TCTTTTCATTCATTGGCAGGTAAGTGTAGTGGTTGGCAAGAAGACTCTCTTTCTTTTTAATTTGAATGATCCTGATAACCCAATTGATCTGAAATTTCAGCAGCCTTATGGCAGTATTGTAACCTACAGATGGTA .......------......:.......:...x..........:...:.x...:....x...:.......x..x.........::......x:...........xx:.x.....::.....xxx...:.:x..... 7M6I122M 102/129 79.1% 135/94230402 0.0% 6/129 4.7% 16364122 NA +11489 chr4 + 190214555 39205523 39205522 39205755 233 AATCTCCTTGTTTACCATATTGTTGCCTTCTTTGCTATAGGTATGGTGATGGCCGCATCATGATTGGTTTTTCATGTGGACATTTTGTGGTCATTTCTACTCATACTGGAGAGCTTGGTCAAGAGATATTTCAGGCTCGTAACCATAAAGATAATCTAACCAGCATTGCAGTATCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAACTGGTAAGTT---ATTTTCACATAT chr4 - 94230402 22842320 22842319 22842549 71387854 71387853 71388083 230 AATCTCTTTTGTTA----ATTTTTTTTCTTTTTACCA--GGTATGGTGATGGCTACATTATGATTGGTTTCTCACGAGGGTGTTTTGTAGTCATCTCTACGCACATTCGTGAGATAGGTCAAGAAATCTTTCAAGCTCACAATCATAAAGATAATCTAAGCAGCATTGCTATATCACAGTCATTAAACAAAGCTGCATCATGTGGTGACAATTGGTAAGTGGCAGTTTTTATATGT ......:..xx...----...x..x:::.:...:.:.--..............::...:...........:...:.x..:::......:.....:.....x..:.:.x.x...x.x........:..x.....:....::..:................x.........x:........x.x:.x.......:...xx.......x..:..:........x---:....:.:..:. 14M4D19M2D182M3I12M 174/227 76.7% 230/94230402 0.0% 9/227 4.0% 16363203 NA +5309 chr4 + 190214555 39214586 39214585 39214744 159 ATTTTTGTTTTTCAGCATTAAAATCCAAGACTTGGTTGACTTAAAAGACATGTATGTTATACTCAACCTGGATGAGGAAAATAAAGGTAT-----TGATTTTTCTGAAGCAGATTGACA-TTTTATCATTCCAGTTACAGAGAGTAAGGTTGTGTTTGTTATCGT chr4 - 94230402 22843474 22843473 22843630 71386773 71386772 71386929 157 ATTTTTGTTTT--AGCATTAAAATCCATGATCTGTCAGACCTGAGAAAGATGTATGCGATAATAAACTTGGATGATGAAAACAAAGGTATGTTAGTAATTGCCTTGA---GGATGGAAATTTTTATAAATCAGGT---AAAAAATAGAATTTTGCTTGTGATTGT ...........--..............x..::..x:x...:.:.:.:.x.......:x...x.x...:.......x.....:........-----.:...x:::...---:...x..x.-......x.x..x:..---.:.:.:..:::..x..:....x..:.. 11M2D77M5I12M3D9M1I15M3D27M 111/151 73.5% 157/94230402 0.0% 14/151 9.3% 16371112 NA +17836 chr4 + 190214555 39215833 39215832 39216265 433 TATTTCAGGATTGGGTACCTTGTCCTGGACTGATGATGGCCAGTTGCTAGCACTCTCTACCCAAAGGGGCTCACTTCATGTTTTCCTGACCAAGCTTCCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCTCACCTCCCTCCTTGAAGTCACCGTAGCCAACCCTGTTGAAGGAGTATGAAAATGGTGTTATTT-----TTCTTTTATTTATTAATAAAATAAGTTTAGCCGTTGATTT---ATTACTATTTTCTTTATTATAGGAGCTACCAATCACAGTTTCTGTTGATGTGGAACCCAACTTTGTGGCAGTAGGTCTTTATCATCTGGCTGTAGGAATGAATAATCGAGCTTGGTTTTATGTCCTTGGAGAAAATGGCAAGT-CTAAATCCAGTTGTTTATTCTTATCTAGCACATAATTTCTGTTCTTATT chr4 - 94230402 22844341 22844340 22844782 71385621 71385620 71386062 442 TGTTTTAGGTGTCGATCAGCTGGCTTGGACAGATGATGGACAGCTGTTGGCGGTATCTACACGAAGAGCATCCCTCCATGTCTTCTTGACAAAGCTTCCAGTCCTTGGAGATACTTGCAGTACACGGATTGCATACCTCACTTCTCTTCTTGAAGTTACTGTAGCCAATCATGTGGAGAGAGTACGATAACCTTTTCCTTTTAAACTTCATTTGGATAAAAGGAAAGTAAGAATTACTAACGGATGGAAACTGATACTGTTTTTCTTACAGGAACTACCAGTTACTGTCTCTGTTGAAGTAGAGCCCAGCTTCATTGCTGTTGGTGTTTATCATTTGGCTGTAGGAATGAACAATCGGGCTTGGTTTTATTTGCTTGGAGAAAACAGTAAGCATTAATTTCATTCTCTTATTTTAAGCAGTCACACCATTGCTTGTCTTTTT .:...:...xx.x.:.xxx:..x.:.....x........x...:..:.:..:x.x.....x.:...:.xx..x..:.....:...:....x........x:.x.....:...:.:.....:...x.......x..:.....:..:..:........:..:........:.x...x..::.....:..x..:xx.x.:x...-----...x...:xx..xx.:x...:....xx.x:.::x:.:x.x---.:.:x..:.x.:...x...:....:......:.:..x..:........x..:..:....:...::.x..x..x...x........:................:.....:............x.x...........::.:...:-:...x.:..x.:x:.....:.x.x.x:x....:x...x..xx....x.. 201M5I40M3I143M1I49M 304/433 70.2% 442/94230402 0.0% 9/433 2.1% 16371492 NA +7651 chr4 + 190214555 39217125 39217124 39217245 121 TTGCTACAGCTGTGAAAAAATTGAAAGATATGGAGTATCTGGGAACAGTAGCCAGTATTTGCCTTCATTCTGACTATGCTGCTGCACTTTTTGAAGGCAAAGTCCAGTTACATTTGGTAAG chr4 - 94230402 22844990 22844989 22845110 71385293 71385292 71385413 121 TTTCTGCAGATGTGAAAAAGCTTAAAGATGCAGAGTATCTGGGTACAGTAGCAAGCATGCATCTTAATTCTGATTATGCTGCTGCTCTCTTTGAGGGTAAAGTCCAGTTGCATATGGTAAG ..x..:...x.........::.x......:::...........x........x..:..x:::...x.......:...........x..:.....:..:...........:...x....... 121M 97/121 80.2% 121/94230402 0.0% 0/121 0.0% 16372135 NA +10487 chr4 + 190214555 39217949 39217948 39218203 255 AATCTGTGAGCCATTATTATTCTTTACGTTTTAGATAGAAAGCGAAATCTTGGATGCTCAAGAAGAACGTGAGACTCGGCTTTTCCCAGCAGTGGATGATAAGTGCCGTATCTTATGCCATGCCTTAACTAGTGATTTCCTCATCTATGGTACAGATGTATGTATTGCCTTCTTTTTTAGAGAACACTGGGAATT---TTTAATTTTTATTTTGTGATCTCAGTCATTCTCTTTTCCTACCAGTCTTTTTTCTATATT chr4 - 94230402 22845418 22845417 22845665 71384738 71384737 71384985 248 AGTCTTTAAGTTCTTTTTTTTTTCTTATGTTTAGATAGAAAGTGAAGGTTTGGATGCTCAGGAAGAAAGAGAAACCCGACTCTTCCCAGCAGATGATGATAAATACCGAATTTTGTGCCATGCCTTAACTGGTGACTTCCTCATATATGGTACAGACGTGAGTATTATCTCTGTTTTTAAGGATCTTTTACAATTGAATATATTTCTGTTCCAATGATTTGAATTAT----------TACTGGTTTTTTTTTTTTTTT .:...x.:..::x..x..x..:.:.xxxx.............:...:x:...........:......x.x..:..:..:..:..........xx........:.:...x..:..:...............:....:........x...........:..:x.....::..::x......::..x.x:.x:x....---.x..x..:.xx.::x:....:.x.:.:..----------...::..:......:.x.x.. 195M3I29M10D21M 175/245 71.4% 248/94230402 0.0% 13/245 5.3% 16372531 NA +3428 chr4 + 190214555 39220214 39220213 39220267 54 CGTCTGAAAAGCAAACAAACAAACAAAAAAACAAAAAACAATAACAACAAACAA chr4 - 94230402 20093811 20093810 20093863 74136540 74136539 74136592 53 CACCTGAAAA-CAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAA .::.......-...................x.x..x...............x.. 10M1D43M 47/53 88.7% 53/94230402 0.0% 1/53 1.9% 19126403 NA +3237 chr4 + 190214555 39220494 39220493 39220551 58 TTAAATTATTTTTCTTTTTTCTCTTCTTCTTCTTCTTTTTTTTTTTTTTAGAAACAGA chr4 - 94230402 19944493 19944492 19944550 74285853 74285852 74285910 58 TTCAATCTTTTTTCTCCTCTCTCCTCTGCCTCTTCTTTTTTATTTTTTTACAGTcaga ..x...:x.......::.:....:...x.:...........x........x.:x.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 19276001 NA +11758 chr4 + 190214555 39224848 39224847 39225039 192 TTATATTTTCATGGCTGGATTTTTTTTTTTTTTTAGACTGGTGTCGTTCAGTATTTCTACATTGAAGACTGGCAATTCGTTAATGATTATCGACATCCTGTCAGTGTGAAAAAGATTTTTCCCGACCCAAATGGGACCAGATTAGTTTTCATTGATGAAAAAAGTGATGGATTTGTTTACTGTCCAGTAAGT chr4 - 94230402 22847326 22847325 22847516 71382887 71382886 71383077 191 TTATCTTTTTCTGTTTTG-TTTTTTTTTCTCATTAGACTGGAGTTATTCATTATTTCTACATCGAAGACTGGCAGTATGTGAATGAATATCGTCATCCTGTCAGTGTGAGAAAAATTTTCCCAGATCCTAATGGAACCAGACTGGCTTTCATAGATGAGAAAAGTGATGGCTTTGTGTATTGTCCAGTAAGT ....x....:x..x:.x.-.........:.:x.........x..::....x...........:...........:.x:..x.....x.....x................:...:.....:..x..:..x.....:......:.:.:......x.....:...........x.....x..:............ 18M1D173M 156/191 81.7% 191/94230402 0.0% 1/191 0.5% 16377522 NA +3054 chr4 + 190214555 39225794 39225793 39225860 67 TCTTCCTTTCCTTTCCTTCCCTTCCCTTTCTCTTCCCTTTCCCTTCCCTTCCTTTCCTTCTCTTCTC chr4 - 94230402 90116980 90116979 90117046 4113357 4113356 4113423 67 TCTTGCACTCCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTC ....x.x:...:.x.::..:..::.:..::..x:...::...:.....::.....x......:.:.. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% -50891186 -43339216 +11385 chr4 + 190214555 39228203 39228202 39228449 247 TTTGTAGGTCAATGACGCTACCTATGAGATTCCAGATTTTTCACCAACCATTAAAGGTGTTCTTTGGGAAAACTGGCCAATGGATAAAGGTGTATTTATTGCTTATGATGATGATAAGGTGTACACTTATGTCTTTCACAAGGACACTATACAAGGTACTAAACCCCTTTTGTGTATATTCGCTGACAGATGAATTTCCCATTGCAG---TAAAATTAAAACA--TTCTTTCTGATGTTTGTGCTGAGTATT chr4 - 94230402 22848048 22848047 22848286 71382117 71382116 71382355 239 TTTCTAGGTGAACGATAGAATATATGAGATTCCAAATTTCTCACCAACCATTAAAGGAATCCTGTGGGAAAACTGGCCAATGGATAAAGGTGTTTTTGTTGCTTATGATGATGATAAAGCATACACTTATGTCTTTCATAAAGACACCATTCAAGGTAC-------------TGTAAATGCTTTGAAAATCTCATCAATTACTTCAGTTATTAAAGCAAAACATGTTCTGTTTTTAATTTGTGTTAAATATT ...x.....x..:..::xx.:x............:....:.................x:.:..x.............................x...:...................:.::.................:..:.....:..x........-------------....x..x.x:...x.:x:xx..:xx::.:.x...---.x...x:......--....x.:.xxx:......:.:.:.... 159M13D35M3I13M2I27M 181/234 77.4% 239/94230402 0.0% 18/234 7.7% 16380155 NA +9692 chr4 + 190214555 39231782 39231781 39231961 180 GTTCTTACATCCCAGGTTTTCTGATGCTTGGGAAATGTGCAGGATTCTGAATGATGAGGCTGCCTGGAATGAGTTGGCCAGAGCTTGTCTACATCACATGGAAGTGGAGTTTGCAATCCGTGTTTATCGGAGAATTGGAAATGTTGGCATAGTGATGTCCTTGGAACAAATAAAGGTAAA chr4 - 94230402 22849541 22849540 22849720 71380683 71380682 71380862 180 GTTCTGCCTTTATAGATTTTCTGAAGCATGGGGCATATGTGTACTTCTGAATGACCAGTCTAGTTGGAATGAGCTGGGCAAAGCTTGCTTACATCACATGGAGGTGGATTTTGCAATACGTGTTTATCGGACATGTGGTGATGCTGGGATGGTGATGTCACTAGAAGAAATAAAGGTAAA .....xx.x.:x:..:........x..x....:x..:..::x:x..........:x..x..:x:.........:...x..:......::.............:.....x........x.............x.xx...x:...:...x..:........x:.:...x............. 180M 137/180 76.1% 180/94230402 0.0% 0/180 0.0% 16382241 NA +7968 chr4 + 190214555 39232118 39232117 39232276 159 AACTCTTGCATTTTTTTTCTCATCAGAATTGCTTTTATTTGTAGGGAATAGAGGACTACAATCTTTTGGCAGGACACCTTGCCATGTTTACCAACGATTATAACCTGGCTCAGGACTTGTACCTTGCATCCAGCTGTCCTATTGCTGCCCTGGAGGTAT chr4 - 94230402 22850262 22850261 22850414 71379989 71379988 71380141 153 AACTTTTGTATTTTAATGTT------GTTTGTGTCCTTTTACAGGGAATAGAAGATCGCAACCTTTTAGCAGGACACCTTGCCATGTTTACTAGCAATTTTAATCTGGCTCAGGATTTATACTTGGCGTCCTCTCGTCCTATTTCTGCACTTGAGGTAT ....:...:.....xx.x:.------:x...:x.::x...::..........:..:::...:.....:.......................:.:.:...x...:...........:..:...:.x..:...xx::........x....x..x....... 20M6D133M 115/153 75.2% 153/94230402 0.0% 6/153 3.9% 16381856 NA +8030 chr4 + 190214555 39234733 39234732 39234884 152 CATTTGAAATTAAGGTCTTTCTCTTCTTAACAGATGAGAAGGGATTTACAGCATTGGGACAGTGCTCTACAACTGGCAAAGCATTTGGCCCCAGACCAGATACCTTTTATATCAAAAGAATATGCTATTCAGCTTGAATTCGCGTAAGTCTT chr4 - 94230402 22850647 22850646 22850797 71379606 71379605 71379756 151 CATCAGAAAATGGTGCTCTTCTTTT-TTAATAGATGCGAAAAGACTTGCAGCACTGGGACAGTGCACTTCAGCTGGCTAAGTGTTTGGCTCCGGACCAAATCCCATTCATATCAAGGGAATATGCACTGCAACTTGAATTCACGTAAGTTCT ...:x....x.::x.:::....:..-....:.....x...::..:..:.....:...........x..x..:.....x...::......:..:.....:..x..x..:.......::........xx.x..:.........:.......::. 25M1D126M 113/151 74.8% 151/94230402 0.0% 1/151 0.7% 16384086 NA +5145 chr4 + 190214555 39240248 39240247 39240392 145 ATTAAAATTCACTCTTAT---------TTTTTTTTCAGGGGTGATTATGTAAATGCTTTGGCTCATTATGAGAAAGGAATAACAGGTGATAATAAGGTA----ACCTTGGATAAAGATAAGATATGCCTAATTATGT-CTGGGTTT----GTTTTCAGTTTCA chr4 - 94230402 22851235 22851234 22851397 71379006 71379005 71379168 163 ATTAAAACTTTTCCTTATAATTTCCAATTTTCTTTCAGGGGTGATTATATTAATGCTCTGGCACATTACGAGAAGGGAATCACTGGGGACAGTAAGGTATTTCATTTCTAATATTGATAGCACATGTAGTATCATATACTGCACTTTCAAGTGTTTTGTTTCA .......:.:x::.....---------....:................:.x......:....x.....:.....:.....x..x..x..:.:.......----.::.:x:...xx....:x.:...:xxx..:..:.-...x::..----..x..:x...... 18M9I72M4I34M1I8M4I13M 106/145 73.1% 163/94230402 0.0% 18/145 12.4% 16389013 NA +14157 chr4 + 190214555 39244222 39244221 39244569 348 TGTTAGTGTTTGCCTTGTGATTGC-------AGGAACATGATGAAGCTTGTCTGGCTGGAGTGGCCCAGATGTCCATAAGAATGGGAGACATACGTCGAGGGGTTAACCAAGCCCTCAAGCATCCCAGCAGGGTCCTTAAAAGAGACTGTGGAGCCATATTGGAGAATATGAAGGTCCTC-----------------------------TTTTCTCTGCATCAATATACATGTGGTCTTTTATACATA---ATAACTTAG------TATTTTAATAATCCTGTCTTATTTTAGCAATTTTCAGAAGCGGCCCAACTGTATGAAAAAGGTCTCTACTACGATAAAGCAGCATCTGTTTACATCCGCTCTAAGAATTGGTAAGAGCTGCCTGCGG chr4 - 94230402 22852260 22852259 22852641 71377762 71377761 71378143 382 TGTCACTGCTTCCCATTTTGTTGCTAGTACCAGGAACACGATGAAGCTTGCCTTGCTGGAGTGGCTCAAATGTCCATTCGAATGGGAGATATCCGTCAGGGCGTAAACCGGGCCATTAAGCATCCCAGTAGGTTACTAAAAAGAGACTGTGGAGCGATTCTGGAGAGTATGAAGGTATTCAAACACGTTAATAAAGCCTAAGGTTGAATATGTGAATGCATTAAGATAC----------TTATTCGTAATCATAATTTAGAAATGATATTACAATGATTTT-CAATATTACAGCAATTTGCAGAAGCTGCACAGCTGTATGAGAAGGGCCAATATTATGACAAGGCAGCATCAGTATACATCCGGTGTAAAAACTGGTAAGTACAGATTGCAG ...:.x..:..x..x.x.x:....-------.......:...........:..x...........:..:........xx..........:..x....::..x..x....::...x.:...........:...x.x..x.................x..x:......:.........x:..-----------------------------x.x.xxx.....:..x....----------....x.:..---....:....------....x:...:..::.-:xx....x:........x.......x..x..:........:..:..:.xx..:..:..:..:........x..x........x.x...:..:.......x:.x.x:...:. 24M7I149M29I20M10D9M3I9M6I15M1D111M 257/337 76.3% 382/94230402 0.0% 56/337 16.6% 16391962 NA +6432 chr4 + 190214555 39245356 39245355 39245458 103 CCTACCTTTCCAGGGCAAAAGTTGGTGATCTTCTGCCCCACGTTTCTTCTCCTAAGATCCATTTGCAGTATGCCAAAGCCAAGGAAGCAGATGGAAGGTTTGT chr4 - 94230402 22853971 22853970 22854073 71376330 71376329 71376432 103 CTTGTCTTTCCAGGGCAAAGGTTGGTGAACTTCTTCCTCATGTTTCATCTCCAAAGATTCACCTACAATACGCAAAGGCCAAAGAAGCAGACGGCAGGTGTGT .:.::..............:........x.....x..:..:.....x.....x.....:..::.:..:..:..x..:.....:........:..x....x... 103M 81/103 78.6% 103/94230402 0.0% 0/103 0.0% 16391385 NA +13212 chr4 + 190214555 39253112 39253111 39254046 935 TTAAAAAAAGTTTATCTGAGCTATTTTTTTACAGATACAAAGAAGCTGTTGTAGCTTATGAAAATGCAAAACAGTGGCAAAGTGTAATCCGCATCTATCTGGATCACCTCAATAATCCTGAAAAAGCTGTCAATATTGTTAGAGAGACCCAGTCTCTGGATGGAGCCAAAATGGTAGCCAGGTAAC-ATAATACATTAATATTTTTGGACTTTCAAAAACTA---------------------------ACCATAAAAGTAAGCCTCTGCCTTCTATCATCAAATATATTAATTCAAAAG------------------GAATATTTAGTCTTT--------ATTTTTTTATCAGGTCTAAGCGTTT-----AAATTCAAA--GGCTGTCGTGGTCAGCAGACAAGAGTATGTCTTTCAAGT-GTAAGCATATAATATAG--------------AACTGC----ATGCTGGGCATGGTG------------GCTCACACCTGTAATCCCAGC--ACTTTGGGAGGCTGAGGCAGGTGGATCACC---------------------TGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTGAAAATACAAAAGATTAGCTGGGTGTGGTGGTGCAT-------------------------------------------GCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAAA---------------GTCGCTTGAACCCAGGAGGCGGAGGCTGCAGTGAGCTGAGATTG----------CACCACTGCACTCCTGC----CTGGGTGACAGAGTGTGACTCCATCTCAA----------AAAAAAAAAAA-----AGAACTGCAATTTATCTAAAAATTTTGATTTTTAAATGGTTTCTCCTGGTTGAAAAATTTTGTAAATCACAAATTTATATTAAGAGT----------CTAGCTAATTAAAGTAC---TTTGCT--------TTAGGTTTTTTCTACAGCTTGGTGACTATGGGTCTGCCATCCAGTTTCTTGTCATGTCCAAATGCAACAATGAAGCTTTCACACTGGCTCAGCAACACAACAAAATGGAAATCTATGCAGATATTATTGGTAAATATCATTTTTT chr4 - 94230402 22855101 22855100 22856226 71374177 71374176 71375302 1126 TTGGAAAAGCTGTTGTGGAGCTGTAATTTTTCAGGTACAAGGAAGCTGCGGTAGCTTATGAGAATGCAAAACAGTGGGACAGCGTAATCCGACTGTGTTTGGATCACCTTAATAATCCTGAGAGGGCCGTTAATATTGTGAGAGAAACCCAATCTCTTGATGGAGCAAAGATGGTGGCCAGGTAATAATTACACGTTAACAAGTTAATCACTTTGAGAACTGTTAACTGTTTCTTTCTTCTGCATTGTCACCAGAGGA-TAAAGTTGTGCTTAGTA-CAGTAAATTGATTTTTTTAAAAGAAATCCTATAAGCTTGTAGAATATATAATATTTCCTTGAACATGTTCTTAATGTGTTCCATAACTTACCTCAATCTCACATTGGCTTTTTATTCTACTTAAGTAATGTATCACTCTTAAATCATGATTGCATTGTCTAGGTTAGTGATTTTCTAGATGCAGCTATGGAGAGCACAGTAAAATTAATTGTTATGCACAATTTTCATATTAACTTCTTTCAGGAAGAATATTCTTGTATATTAGCTTTAATTGAACTTACAGCTTGTGAGATGGGCAGTTAG-----AATTTTAAAAGCATGG-AAGAAATCATACCTGATGGAA---------GTTGGTGAGGCGTGCTGGTGTATCAGACTCAGTTACTAGTGCTTGGTTAATGACTGATGATTTCAGTTTTGTGGTTTGAGTT-CTTTAAAATTTGAACAACTAAACAGATACTACTTTATTCCATTTTAACTCTCCAATTGAAAATTACATTAACCTGAAGTAGTGGGTTTAGACAATAATAAAAGCTTGCCGTGCTGTGTTACTTATAGTAAGTTATTTTTAGTAACCTATTTAAAAGATAAAATGTGTAGATATGAAATAAATTAGAAATATATCATACTTGCAT-----------GCCACAAAATACAGTATGTTTCA---TCATGTTTGGAGCATTCATTGTGTTACCCAACTAAAGTATTAATTTGTTCATTCCAACTAGATTTTTCCTGCAGCTCGGTGACTATGGTTCTGCCATCCAGTTCCTGGTCATGTCCAAATGCAATAATGAAGCTTTCACATTAGCTCAACAGCACAACAAGATGGAGATTTATGCTGATATCATCAGTGAGTATTTCTGTTT ..::....:x.x.xx:x.....:.xx....x...:.....:.......:x...........:...............x.x..:........xx.x.:.:..........:...........:.::..:..:........x.....:.....:.....x........x..:.....:.........:-..x.:..:....:.xx..x:xxx:..::.:....:---------------------------....x.::.-...:x:.x...:.xx..-..x:....xx...xx..:.....------------------......x..:.x...--------..x..:...x::x..::x.xx::..-----..x:...x.--....x.:xxxx::.x:x:.xx.:x....xx..:.:..:.-:.:.x:::..x:.x...--------------.:x...----...xx.:...::..:------------::x....x:.x.x..x::.:.--x:..::...:.xxx.xx.xx..:x..:.x.---------------------....:.x:.x....x.-----.:::.x:xx.:.....-:.:.xx:...x:..:x..:..---------:..:.:x:..:...x.....:..-------------------------------------------x::...:...:x..:.-...x::.:x:...:xx.xx...---------------x:.::..x...:.xxx.:x:.:.:::.:..x.:.x....::.x.----------..x:.x.:x.xx.:...----...x..x..xx.xx..:.x.:xx.:.:.:----------....:.x....-----...xx..x...xx..:x:...xx.x.x..x:..:x..-----------.:::x.....x:x...x:.:x..---.:..:..x:...:----------:..x.:..:.......:---....:.--------:...:.....:..:.....:...........x..............:..x.................:...............:.:.....:..:........:.....:..:.....x.....:..::..:.:...:x:.x... 186M1I35M27I9M1D17M1D23M18I15M8I25M5I9M2I39M1I17M14I6M4I15M12I21M2I30M21I16M5D16M1D21M9D23M43I16M1D22M15I44M10I17M4I29M10I11M5I37M11D23M3D13M10I17M3I6M8I145M 586/903 64.9% 1126/94230402 0.0% 255/903 28.2% 16398011 NA +10181 chr4 + 190214555 39253880 39253879 39254046 167 TAGCTAATTAAAGTACT---TTGCTT--------TAGGTTTTTTCTACAGCTTGGTGACTATGGGTCTGCCATCCAGTTTCTTGTCATGTCCAAATGCAACAATGAAGCTTTCACACTGGCTCAGCAACACAACAAAATGGAAATCTATGCAGATATTATTGGTAAATATCATTTTTT chr4 - 94230402 22858945 22858944 22859122 71371281 71371280 71371458 178 TACCCAACTAAAGTATTAATTTGTTCATTTCAACTAGATTTTTCCTGCAGCTCGGTGACTATGGTTCTGCCATCCAGTTCCTGGTCATGTCCAAATGCAATAATGAAGCTTTCACATTAGCTCAACAGCACAACAAGATGGAGATTTATGCTGATATCATCAGTGAGTATTTCTGTTT ..x.:..:.......:.---...:.:--------...:.....:..:.....:...........x..............:..x.................:...............:.:.....:..:........:.....:..:.....x.....:..::..:.:...:x:.x... 17M3I6M8I144M 136/167 81.4% 178/94230402 0.0% 11/167 6.6% 16394935 NA +8011 chr4 + 190214555 39255838 39255837 39255970 133 TCTGTTACAGGTTCTGAAGACACTACTAATGAAGACTATCAAAGCATTGCCTTATACTTTGAAGGAGAAAAGAGATATCTTCAGGCTGGAAAATTCTTCTTGCTGTGTGGCCAATATTCACGAGTTAGTATTT chr4 - 94230402 22860459 22860458 22860591 71369812 71369811 71369944 133 TCTCTTGCAGCTTCCGAGAGTACCAGCAATGAAGATTATCAGAGCGTTGCACTGTATTTTGAAGGAGAAAAGAAACATTTCCAGGCGGGAAAATTTTTCTTGTTATGTGGCCAATATGGACGGGTCAGTACTT ...x..:...x...:..::::..:.x:........:.....:...:....x:.:..:................:.:..:.:.....x........:......:.:............xx...:..:....:.. 133M 102/133 76.7% 133/94230402 0.0% 0/133 0.0% 16395379 NA +8142 chr4 + 190214555 39255838 39255837 39255970 133 TCTGTTACAGGTTCTGAAGACACTACTAATGAAGACTATCAAAGCATTGCCTTATACTTTGAAGGAGAAAAGAGATATCTTCAGGCTGGAAAATTCTTCTTGCTGTGTGGCCAATATTCACGAGTTAGTATTT chr4 - 94230402 22857560 22857559 22857692 71372711 71372710 71372843 133 TCTCTTGCAGCTTCCGAGAGTACCAGCAATGAAGATTATCAGAGCGTTGCACTGTATTTTGAAGGAGAAAAGAAACATTTCCAGGCGGGAAAATTTTTCTTGTTGTGTGGCCAATATGGACGGGTCAGTACTT ...x..:...x...:..::::..:.x:........:.....:...:....x:.:..:................:.:..:.:.....x........:......:..............xx...:..:....:.. 133M 103/133 77.4% 133/94230402 0.0% 0/133 0.0% 16398278 NA +5492 chr4 + 190214555 39257478 39257477 39257606 129 CTTTTCAGGCACTTAAACACTTCCTGAAATGCCCAAGCTCGGAAGATAATGTGGCAATAGAAATGGCAATTGAAACTGTAAGTACGCTTTCAATGAAACTTTCAATAATGCCAATTTTTTAAAAAACTT chr4 - 94230402 22861339 22861338 22861463 71368940 71368939 71369064 125 CTTTTTAGGCATTAAAGCACTTTATAAAAAGCCCAAACACAGAAGATAACCTGGCTATCGAAATGGCAATTGAAACAGTAAG--CAATTTTGATAAAAC--AAAATATTCCTTATCTTTTCAAGAAGTT .....:.....:.x..:.....:x.:...x......:.x.:........:x....x..x.................x.....--.:x...::..:....--xx....x.x.:x..:....x..:..x.. 82M2D15M2D28M 94/125 75.2% 125/94230402 0.0% 4/125 3.2% 16396139 NA +5379 chr4 + 190214555 39266042 39266041 39266146 105 TTTTTCTCTCTT-ATTAAACAGGTTGGTCAGGCCAAAGATGAACTGCTGACCAATCAGCTGATAGACCATCTCCTGGGGGAGAACGATGGCATGCCTAAGGTACTG chr4 - 94230402 22861593 22861592 22861698 71368705 71368704 71368810 106 TTCTTCTGTCTTTATTTAATAGGTGGGACAGGCAAAAGACGAAGCCCTAAAAAATGAACTGATAGATTATCTTACAGGAGAGAATGATGGCATGCCTAAGGTATTG ..:....x....-...x..:....x..x.....x.....:...x:x..:.xx...x.:........::....:x::..:.....:..................:.. 12M1I93M 80/105 76.2% 106/94230402 0.0% 1/105 1.0% 16404449 NA +7770 chr4 + 190214555 39267977 39267976 39268098 122 TAATGGTTTATGTGT--------CAGGATGCCAAGTACCTGTTCCGCTTGTACATGGCTCTGAAGCAATACCGAGAAGCTGCCCAGACTGCCATCATCATTGCCAGAGAAGAGCAGTCTGCAGGTAGGTC chr4 - 94230402 22866428 22866427 22866557 71363846 71363845 71363975 130 TAATTGCTTTTGTATGACTTAAATAGGACGCCAAGTACCTATTCCGCTTGTACATGGCACTGAAGCAATACAGAGAAGCTGCCAGAACTGCTATAATCATCGCCAGGGAAGAGCAGCGTTCAGGTAAGTC ....x.:..x...:.--------:....:...........:.................x............x...........x::.....:..x.....:.....:.........:x.x......:... 15M8I107M 102/122 83.6% 130/94230402 0.0% 8/122 6.6% 16401549 NA +9937 chr4 + 190214555 39269968 39269967 39270106 139 TTTTCAAGGCAACTACCGGAATGCACACGATGTTCTCTTCAGTATGTATGCAGAACTGAAATCCCAGAAGATCAAAATTCCCTCCGAGATGGCCACCAACCTCATGATTCTGCACAGCTATATACTAGTAAAGGTGAGG chr4 - 94230402 22868444 22868443 22868582 71361821 71361820 71361959 139 TTTTTAAGGAAACTACCGAAATGCGCACGATGTTCTTTTCAGTATGTACTCAGAATTAAAGACCCAGAAGATTAAAATTCCTTCTGAGATGGCTACAAACCTTATGATTCTACACAGCTATATTTTAGTGAAGGTAAGG ....:....x........:.....:...........:...........:x.....:.:..:x..........:........:..:........:..x.....:........:...........x:....:.....:... 139M 117/139 84.2% 139/94230402 0.0% 0/139 0.0% 16401524 NA +3251 chr4 + 190214555 39270451 39270450 39270524 74 CTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::........::x...x:xx.x.........:...........:.:....x.::... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 21073325 NA +6417 chr4 + 190214555 39272972 39272971 39273069 98 TGTTTCAGATTCATGTTAAAAATGGAGATCACATGAAAGGGGCTCGCATGCTCATTCGGGTGGCCAACAACATCAGCAAATTTCCATCACGTAAGTAC chr4 - 94230402 22869957 22869956 22870054 71360349 71360348 71360446 98 TATTCCAGACTCACGTGAAACGTGGTGACCACATGAAGGGAGCGCGTATGCTCATACGTGTAGCCAACAACATCAGCAAGTTCCCATCACGTGAGTAC .:..:....:...:..x...x:...x..:........:..:..x..:........x..x..:.................:..:.........:..... 98M 79/98 80.6% 98/94230402 0.0% 0/98 0.0% 16403015 NA +10605 chr4 + 190214555 39274779 39274778 39274989 211 TGTTGCTGCTCTCCCCTTTTCTCTTGCAGACATTGTACCCATCCTGACGTCAACTGTGATTGAGTGTCACAGGGCAGGCCTGAAGAACTCTGCTTTCAGCTTCGCAGCTATGTTGATGAGGCCTGAATACCGCAGCAAAATAGATGCCAAATACAAAAAGAAGATCGAGGGAATGGTCAGGTAGGCAGAGATGGCTATTTCTGCTATCTAA chr4 - 94230402 22870741 22870740 22870946 71359457 71359456 71359662 206 TATTGCTATTGGCTCATTTTGT--TGCAGACATTGTACCAATTTTGACTTCAACAGTAATTGAGTGTCACAGAGCAGGATTGAAGAACTCAGCCTTCACTTTTGCTGCTGTGCTGATGCGACCTGAGAATCGAAATAAAATAGATCTTAAATACAAAAAGAAAATCGAAGCAATGGTCAGGTGAGCAG---TGTTCATCTGTACTTTCAAA .:.....::.xx.:.x....x.--...............x..::....x.....x..:..............:.....x:..........x..:....x:..:..x...:..:.....x.:.....:x.:..x.::.........x::..............:.....:.x...........::....---..x::..:.x.:..x..x.. 22M2D164M3D20M 157/206 76.2% 206/94230402 0.0% 5/206 2.4% 16404038 NA +5984 chr4 + 190214555 39278119 39278118 39278213 95 TCCTGTTTCCAGGGTCGACACATGTTGAAAGATGACTGGACGGTGTGTCCACATTGTGACTTCCCTGCTCTATACTCAGAATTGAAGATGTAAGT chr4 - 94230402 22872824 22872823 22872918 71357485 71357484 71357579 95 TCTTGTGTGCAGGGTCGGCACATGGTACGGGATGACTGGACTGTCTGCCCACATTGTGACTTTCCTGCCCTCTATTCAGAATTCAAGAGGTAAGT ..:...x.x........:......x.:x::...........x..x..:..............:.....:..x..:........x....x...... 95M 77/95 81.1% 95/94230402 0.0% 0/95 0.0% 16405295 NA +5628 chr4 + 190214555 39278517 39278516 39278677 161 TGCCTTTCCCTCCCCTAAACAGCATGCTAAACACTGAAAGCACATGTCCTATGTGTTCAGAAAGATTAAACGCTGCTCAGCTGAAAAAGATTTCAGACTGTACCCAGTACCTGCGAACGGAGGAGGAACTGTGATTGGC-ACGTGCAGGTGAGTGGCAGAGC chr4 - 94230402 22873844 22873843 22874000 71356403 71356402 71356559 157 TGCCCCTCTTCCTTTAAAACAGCATGTTACAGACTGAAAACATCTGTCCAATGTGTTCTGAAAGAATCAACATTGTTCATCTTAAGAAAATAAATGACTGCACACAGTACCT-----CAAACACGATGCCGTGGACGGCTAAGTTCAGGTACGTAGTAGAGC ....::..:::.:::x..........:..x.x.......:..:x.....x........x......x.x...::..:...x..x..:..:..xxxx.....:..x........-----.::.x:x.:x:.:...:x:...-.x..x.....:x..:.:..... 112M5D22M1I22M 106/156 67.9% 157/94230402 0.0% 6/156 3.8% 16404673 NA +3097 chr4 + 190214555 39281167 39281166 39281240 74 AAATTTTTTGGTTATTGCCTTCTTTGTCCTAAATATATATGTGTGTGTGTATATATATATATATATATATAGAG chr4 - 94230402 89821249 89821248 89821322 4409081 4409080 4409154 74 AAATTCTCTGTTTGTTTCTTCTGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAG .....:.:..x..:..x.:.::x:..xxxx....:.:.:...x.x.....:.:...............:..x.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -50540082 -43690320 +3819 chr4 + 190214555 39281196 39281195 39281259 64 TAAATATATAT----GTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398806 33398805 33398873 60831530 60831529 60831597 68 TAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:...x.----.....:....:.:....:.:.......:.:.............x.....x... 11M4I53M 53/64 82.8% 68/94230402 0.0% 4/64 6.2% 5882390 NA +3409 chr4 + 190214555 39281199 39281198 39281263 65 ATATATATGTGT------GTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x....:.------.....::.:.:.:....:.:.......x.x.............x.....x... 12M6I53M 52/65 80.0% 71/94230402 0.0% 6/65 9.2% 5882396 NA +3496 chr4 + 190214555 39281200 39281199 39281257 58 TATATATGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398816 33398815 33398873 60831530 60831529 60831587 58 TAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..x.x:....:......:....:.:.......:.:.x...........x.....x... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 5882384 NA +3277 chr4 + 190214555 39281204 39281203 39281255 52 TATGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398822 33398821 33398873 60831530 60831529 60831581 52 TGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:..:...........:.:.......:.:.x.x.........x.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 5882382 NA +3449 chr4 + 190214555 39281209 39281208 39281261 53 GTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398821 33398820 33398873 60831530 60831529 60831582 53 GTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:..:.:.:....:.:.......:.x.............x.....x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 5882388 NA +3774 chr4 + 190214555 39284405 39284404 39284495 91 CATCGTTCACTGCAGCCTCAAACTCCTGGGCTCAAATGATCTTCCTGCCTCAGCCTTGCAAGTAGCTATGACTACAGGCATGTGCCACCAT chr4 - 94230402 18197117 18197116 18197205 76033198 76033197 76033286 89 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ....:.x:x..:.....:x..:..:.....:....:..x.::x.xx.x.........x.........:x:......--.:..::....::. 76M2D13M 62/89 69.7% 89/94230402 0.0% 2/89 2.2% 21087288 NA +11622 chr4 + 190214555 39291635 39291634 39291854 220 TTACCTTGGGATCCAGCTTTGAAAAGGGACTAGGTTTGCCACCCCAGCTGCTGATTTCCATGATATTCTCAAAGTCTTCTTTCATCAAATAATATGTGTCCATAAGTGCAACAACATCCTGTACTCCGTCTACTCCTTGTGAGGTCAAGGGCTGTACAAGTGCATCCCTTAGAAGCGACAGATAATCCATGTTTACAGTCCTTTTGCTGGAGTAAGTTCT chr4 - 94230402 22876394 22876393 22876613 71353790 71353789 71354009 220 TTACCTTGGGATCCAGCTTTGAAAAAGGACTGGGTTTACCTCCCCACATGCTTATTTCCATTATGTTTTCAATGTCTTCTTTCATTAGGCAGTACGAGTCCATGAATGCTATAGCATTTTGTACACCATCTGCTCCAAAGTCCTTCAGTGGCTGGACGAGTGCATCGCGCAGATGAGACAGATATTCCATGTTTACTGTCCTCTTGCATGCCTGGGTTCT .........................:.....:.....:..x.....xx....x........x..:..:....x............:.:::.:..:.x......:.:...x.:.:...::.....x..:...:....xx:xxxxx...:x.....x..:........x.x:...x.x........x...........x.....:....xx.xx.::..... 220M 166/220 75.5% 220/94230402 0.0% 0/220 0.0% 16415241 NA +10754 chr4 + 190214555 39295610 39295609 39295770 161 CTACCTGAGACTCATATGCAAGGCCAGGTCCTGAACAATACGATCATGTTTGCCTGTAGACGAGTGCTTCCCCAGCCAGCTTGGGAAGGTGGGAAACTGGGTCATGTACCCCCTCATCAACTCTCCAGGAAGAACACTGGCATAAATGGCCTGAAAAAAAA chr4 - 94230402 22877057 22877056 22877217 71353186 71353185 71353346 161 CTACCTGAGGCTCATGTGCATGGCCAGTTCTTGGATGATACGTTCGTGTTTGCCCGTGGATGAAAATTTCCCCAGCCAGTTGGGAAAGACAGGAAACTGGGCCATGTAACCTCTCATCAGCTCCCCAGGAAGAACACTTGAATAAATAGCCTGAAAAAAAA .........:.....:....x......x..:..:.::.....x..:........:..:..:..:x::............:.x..:...:::..........:......x..:.......:...:..............x.x......:............. 161M 130/161 80.7% 161/94230402 0.0% 0/161 0.0% 16418553 NA +16361 chr4 + 190214555 39300014 39300013 39300419 406 TGCTCACCTGCGCAGGCAGAAGACTCCAGTTTTGCTTACTCCGGATCTGGCTGTCCACTAGGTCACCATCGCATATGCTGTCTGCTGCTCTGCTTAAAAGCATCAGGTGCTTTTTCATGTCACCCCTGCAGGAAAGAACCAGTCTGGATTATCCCACTCTCCACACCCCAGGTCCCTTCTTCACGG---GTATTTAGCCTTCGCAGTGCTGGATACTAAGCACACCTCTCACCAGCTCTGGACA--------CTCACCCTGCTGCTACAGGCTTCACGTGTATGTAATTTTCCTGGACGAAGAGGGGTGCTATTGAATAATCATGAAAAAAGAGATCTGACTTGTCCACAAGTGACATGTGAGCAGTCTCCTCTCCAGCTGCAAACACTTTCCGGGCAACATCAAATGGGCCCTGAA chr4 - 94230402 22878217 22878216 22878615 71351788 71351787 71352186 399 TGCTCACCTGTGTCGGTAGAAGGTTCCAGTTTTGCTTGGTACGAATCTGTTTGTCCACCAGATCACCATCACATATACTGTCAGCAGCTCTACTCAAGAGCATCAAGTGTTTCTTCAGATCTCCTCTGGGGGAAAAAA---GAATTGATTTTATTACAGAGCAAAATACA-----------TACAGAAAGCTTTTAATCTAAATTTTACTCCTTGTGAA----ATTCTCCATCAATTTAGGGTATGGAGTAACTCACCCAGCAGCAGCAGGTTTCACGTGCACATAGTTCTCTTGGACAAAGAGAGGTGCTAGGGAATAGTCATGGAAGAAGAGATCTGATTTGTCTATAAGAGACATTCGAGAGGCCTCCTCTCCAGCAGCAAAAACCTTCCGGACAACATCGAAAGGGCCCTAAA ..........:.:x..:.....::.............:x.x..:.....x:.......:..:........:.....:.....x..x.....:..:..:.......:...:..:....x:..x..:...x:.....:..---.xx.x....x.x::..xxxx..x.x:x..-----------:..:.---.:x....::..xx::xx.:..xxx.::x..----.:::::..:..::.:x..::.--------.......x..x..x:....:........:.::..:..:..:.....:.....:.......xx.....:.....:..:...........:.....:.:...x.....x:...x:.:............x.....x..:......:.......:..x.......:.. 138M3D29M11D5M3I30M4D21M8I165M 277/388 71.4% 399/94230402 0.0% 29/388 7.5% 16421797 NA +13348 chr4 + 190214555 39302275 39302274 39302877 603 TACCATTTTGATATCCTTTTTGGCTCTGTGAGAATCAGCTTTGGCCTGGTCATAGGTTAATGCTTTACTTCGTGCACACCACATACTCAGATTATGTAAAACCTAAAAGA-----ATCACAAAT----------AAGACA-------ACGTCAAGATAGGAAAA--------TCCTGTTGCTCCCCATCCCTACAAGGTTGAAAGCATTAGTTAAAAATAATCAACAACTGTTACATGATATATATTTAATTTACCTGTCTGATATCTTGATTGGCTCCCAAAATTATTTCATTCATAGCTGGAGGGGGAATCTTTAAACCTTCTTTAAATGCAATAGACATCATAGCACCCTG-------------------AAATTGACAAGGG--------------------AGGA---GTCCTCAATG-----------------------ATTTT--------------TAACTCATAT---------------------AATCAGGT----------------------------------ATTTTAAAAA------------TATTTATCAGGTACTTTTAAA---AATTGACCCTTAAATA-------------------------------------------------AATAGGCTAGTGTGATG----------------------------------------------------GAAAAAAAAT--------------------------TTCAATCATCAT-ACCTTAATCTGTTCAACCCGAGGTCTTTGAAAACGAAGATCAAAACAATAATGAACCAGAGAGCGAATCTTGGGATGATTTCTATCATTGCACATACAAATAATGGGAATTTTAGTATGTTTTATCAGGCCAATTAATTCCTG chr4 - 94230402 22879075 22879074 22879949 71350454 71350453 71351328 875 TACCAGTTTGATATCCTTTTTGGCTCTGCTGGCGTCCGTTTTGGCCTCGTCATAAGTCAGAGATTTATCTTTTGCACACCACATATTGAGATTATGCAAAACCTAAAAAATGCAAGTGACAATTTGGTACCGTAAAAACACTTAAAGACTTCAGAAGAGGAAAAAAAAAAAAGCCTA---ATCCCTATACCTACA----------------TTCATGCTAAT-----GCTG--ACATGGCAC---------TGACCTGTCTGATGTCCTGATTTGCTGCCAGGATTATCTCGTTCATAGCAGGTGGTGGAATTTTCAAGCCTTCTTTAAACGCAATAGACATCATGGCACCCTGTAACACAGACAGCTCTGAGAAACTAACAGAGATCTCCTATCCTTTCCCTTACAGGGCACATTATCAATGTGCTGGGTTGTTTGGTTTATGGGGTTTTATTGGAATTAAGTATAATTCGTACTGTTTTCTTTATGAACCTACAAGTCAAGTCAGTCCTTGATGCTGGTATGAAAAAAATGAGATCATTTCCAAAAAATCCTTGGATGTATTTAAGATGGACATCTGAACCTGAATGGCTTTGAGATACTTCAGTCTTCCCTCCCAGAAAGCCAGACAACCCCATCTGGGAGAGCAGAGTAACTCAGTGAGGTGACCTGCTGAGTTTCAAGCGGTGTTTTCCAATTCTGTATGAACTGTGCCACATGGAGATAGATCGCTGCCGGTAACTCAGTGCAAGCCATGCAGCCATCTTTACCTTAATCTGTTCTAGACGAGGTCTCTGAAAACGAAGATCAAAACAATAGTGGACCAAGGAACGAATTTTCGGATGGTTTCGATCGTTACACATACAGATGATGGGTACCTTTGTGTGTCTAATCAAACCAATCAGCTCCTG .....x......................:x:.x:..x.:........x......:..:.:x.x....::.:x.............:.x........:...........:.-----:.x....x.----------..:...-------..x...::.x.......--------x...:---x....:..x......----------------..x.x:x....-----:...--.....::.:---------.x...........:..:.....x...x...::.....:..:........x..x..x.....:..:..:...........:..............:........-------------------...:.:...::.:--------------------...:---:.:x......-----------------------:....--------------...:..:..:---------------------.:...:..----------------------------------....:x....------------......xx.x.x..x.:.:..---:.x..:.::.x.:...-------------------------------------------------.:..:x::....x.:..----------------------------------------------------.:.:.x.:..--------------------------.x..::....x.-..............x.xx........:.......................:..:....::..:.....:..x.....:....x...:..:........:..:.....x.::..x..:...:.x....::.....:.::..... 110M5I9M10I6M7I17M8I5M3D15M16D11M5D4M2D9M9D103M19I13M20I4M3I10M23I5M14I10M21I8M34I10M12I21M3I16M49I17M52I10M26I12M1I143M 433/568 76.2% 875/94230402 0.0% 342/568 60.2% 16423200 NA +6095 chr4 + 190214555 39303056 39303055 39303195 140 TTACCTGAATTCCTCCCCTATCCTCATTGCCTGCCATGCCATCTACTTCATCCATGATGAGAGCATGTTTCGTGCTTACTGAAGAGGCTGCTCCATCTGACCCAGGTTGAGGAGCAATGGGATGAGACAAAAACAAAATA chr4 - 94230402 22880819 22880818 22880954 71349449 71349448 71349584 136 TCACCTGAATCCCTCCTCTGTCTTCATTGCCTGCCATACCATCCACTTCATCCATGATCAATACATGTTTCCCGCTAACTGATGAGGATGTGC---CTGAAAATGAATATGGA-CAAGAAAATGAGATTGCAACACAATA .:........:.....:..:..:..............:.....:..............x.:x:........x:...x.....x....x..:x.---....xxxx.:x.:x...-...x:::......:x:x....x.... 93M3D17M1D26M 101/136 74.3% 136/94230402 0.0% 4/136 2.9% 16422237 NA +9278 chr4 + 190214555 39304786 39304785 39304951 166 AACAACAGGAGGTCAAAAAGCCACATACTTGAATAAAAGCCTTTGATGCTGGTATTGTTCAGTGACTCAGCAACAATCGCCTTCAAACTGCTCTTACTCCGGGTGTCACTTGCATTCAGTTCCACGTAGCTGTATCCCAACTCCTAATCAAAATATTGGAAACCAC chr4 - 94230402 22881388 22881387 22881538 71348865 71348864 71349015 151 AACAACAGG--------------CATACCAGAACAGAAGTCTTTGATGCTGGTGTTGTTCAGTGATTCAGCAACTACTTCCTTTAGACTGTTCTTACTTCGAGTGTCACTGGCATTCAGCTCCACGTAGCTGTACCCCAGTTCCTAGTCCAAACA-TACAAACCAC .........--------------.....:x...:.:...:.............:...........:........x.::x....:.:....:.......:..:........x........:..............:....::.....:..x...:.-.:x....... 9M14D132M1D10M 125/151 82.8% 151/94230402 0.0% 15/151 9.9% 16423398 NA +6884 chr4 + 190214555 39306587 39306586 39306719 133 CCCACCTGACACACCAGGGAAGCTGTGGTGGTTTTGCCAACACCAGGAGGGCCTGACAGCAACGCTGCTTTAAAACTAGAGCCATCATCTTTGCCGGAAAATTTACCAAACTTTGCTGCTAGGAAAAAAGAAG chr4 - 94230402 22883242 22883241 22883368 71347035 71347034 71347161 127 CTCACCTTACACACTAAAGAAGCCGTGGTAGTTTTACCGACTCCAGGTGGACCAGAAAGCAATGCTGCTTTAAAACTAGCACCGTCATCTTTGCCTCCAGATTTGTTGGTCTTTGCT------ATAAAAGAAG .:.....x......:.::.....:.....:.....:..:..x.....x..:..x..x.....:................x:..:...........xxx.:....:::::x.......------.x........ 117M6D10M 98/127 77.2% 127/94230402 0.0% 6/127 4.7% 16423345 NA +13259 chr4 + 190214555 39308632 39308631 39309064 433 TCACCGTGTTTTTTATCTTCGGAAGAACTCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTTGTTGGCACAGCTCTGGTCACCTTGCTGTCCAATTATGGTCTTGAGCGAGGTTGGCTTATATTTATCCACCCAGAGCAAATTTTCCACTTTGTTTTCACTGCTGTCATCAGCCAAATTCC---TAGCCTTGCTGTCACCACTTGTCTCCTCAGCCACCTGCTCCTTGAAATCCAGGCTTTTCCAAAACACATCTGTTTCCTTTTTTATTGTCTTTGCCAAACTGTCCCTTTTGGAAGTCGGCCTGCTCTTTTTAGATTCTGATTCCTTTTTAGATGGACTAATTTTTCTTTTTCCTTGGACATTTTTTTGGGGTGTTCTCTCCAGTTTGGACTC---TTTCTTCATCTTAAGAAG--TGG--AAAAATGAGGAAAAAAGAAA chr4 - 94230402 22884129 22884128 22884568 71345835 71345834 71346274 440 TCACCACCTTGTCCATCTTCCGAGGTATTCTTGTGCCAGCTTCGGAGCCATCGGAGGAGTTTATTGGCACAGCTTTGCTCACCCTGCTGTCCAATTATCGCCTTAAGAGACACAGGCTTGTATTTATCTACCCATAGCAATGTCTCTGTTCTATCTTCACTACGCTCAGAAACGAAGTTCCCCTTAGGTTTGGGGGCTTCTTTCTTCTCCACAG---TTTGATGTTCAAAGTCCTTAAGCTTCTGAACGGCGGTAGCTTCTTTCTTGACAGATTTGAAGGGACCTCCCTTTTCAGGTGTATGATTACTTTTTTTCCTATCAGCTTCCCTTTTGAGAGGACTAAAATTCCTTTTGCCAGACTCAGTTTTCTGTGGTGTCTTTTTATGTCTTGACTCTGTTTTCTTTGCCTTAGGAAAATTAGACaaaaattaaaaaaaaataaa .....::x..x.::......x..:.x.:....x......:..........x..x........:...........:..x.....:..............x.:...:..x..x::x.....:........:.....x.....xx.:..:::.:.:.:......:.xx...xx.:.x..:....---...x:...xx.x.x:.x:.:x.....x...---::..x.x:.::..:...xx:xx:...::..xx:.:x:x.:...:..:..x.:x.x:..x:xx::..:x:..:...::.:x..xx.x:.:..:.....xxxx..x.x....:....:::x.......xx..:.....x..xx:xx..x....:..x.....::.:.:xx..:.x.....---......:::....:...:--.:.--......x.::......x... 181M3I30M3D178M3I18M2I3M2I20M 280/430 65.1% 440/94230402 0.0% 13/430 3.0% 16424503 NA +7845 chr4 + 190214555 39311439 39311438 39311562 124 ACGAACCTCAGTTTCAACTGCTATTTCATACTTGGATTTCTTGCCTGGCATAGTCCGAATCAGATTCAACAGGCCATCTTCATCAATAATTTTTGTCCCCAAGGCTGCGGCCTGTTGATTAAAA chr4 - 94230402 22885687 22885686 22885810 71344593 71344592 71344716 124 ACCAACCTCAGTTTCAGCTGCCAGCTCGTACTTGGACTTCTTGCCTGGCATAGTTCGAACAAGATCAAATAGGCCATCCTCATCAATAATTTTTGTCCCTAAAGTCGATGCCTGGGGGCAAAAA ..x.............:....:.x:..:........:.................:....:x....:x..:........:....................:..:.::.xx.....xx.::x.... 124M 99/124 79.8% 124/94230402 0.0% 0/124 0.0% 16425752 NA +13555 chr4 + 190214555 39312742 39312741 39313082 341 CAGTACCCACCTTATCACTCTTGGACTGTCCACTATCACGACCCATGACAAGATAATTTGTTTTCTTGCTGACATTTCCTGTTACTTTTCCCCCATAACGTTCAATTAGAGACTTGGCCTCATCTCGTTCAATAGACTCCAGCACGCCTGTGATTACAAATATAAGGCCTTCCAAGCAATTTTCAGCTCCCTAAAAACCAAAATGTTCAAGCAGAGAGGAAATTACAT-------GGTAGCTTTCCAAAGAAACATTTGGCATCAAAACTGCAGGAAGTTGATTTTTCTCATTTCACATCATAAATAACCTTGGCATGGAAAGTTTGCTGGAAATTTACAGCAAATAA chr4 - 94230402 22886080 22886079 22886397 71344006 71344005 71344323 318 CAACGCTCACCTTTTCACATTTAGACTGCCCGCAGTCTCGTCCCATAACCAGATAGTTTGTCTTTTTGCTGACATTGCCAGTTACTTTTCCTCCGTAACGTTCAATCAGAGACTTGGCCTCATCTCTTTCAATGGACTCCAGAACTCCTGTAATTACGAATGTCAGGCCTTCCAAGCAGTTTTCAGCTCCCTGACAACCATAACAT----------AGAAAATACCATTCAATGATGCAGTTCTACAAATACTCCTTCAAC----------CATGAGGTTTGGTTTTTTTTTTTTA----------ATCTCTGCCATGTCAAGTGTTCTATGAAATTTTAAAAATTAA ..:::.:......x....x:..:.....:..:.x:..x..x.....:..x.....:.....:..:...........x..x...........:..:...........:...................x......:........x..x.....:.....:...:.x..............:.............:.x.....x..::.----------..:....xx...-------x.:..:.:.x....x.xx.x..:::.----------..x..:...x:x....:.:x...:.----------.x.::..x....xx....x.x..:x:..x..x:.:x..x... 206M10D12M7I26M10D25M10D42M 232/311 74.6% 318/94230402 0.0% 37/311 11.9% 16426662 NA +7924 chr4 + 190214555 39316910 39316909 39317086 177 CTTACCTTTGGTATTTCTTTGGAGCCCAGAGCCTTGGGACCTTCTCGATTTAAGTAGCTTCGATAAGCTTGATAATTAGTGCGTTTCTTTTCAGAATCTTCAGGACTTACAGACTTTGGGAACAGGGAAAGGAAAATGA--ACAAAGT-CATACAGAA-----TTCATGCAAAATTTAAAATACA chr4 - 94230402 22886798 22886797 22886976 71343427 71343426 71343605 179 CTTACTTGAGGTATCTCTTTGGAACCCAGAGCTTTCGGACCCTCACGATTGAGGAAGCTTCGGTAGGCTTGATAGTTGTTTCGTCTCTTCTCAGAGTCCTCAGGACTTATAGACTTGGGCA------GAAGAAAAATAAATACATGGTACATATAAAAACACTTTCATTAAATAAATAAAATGCA .....:.xx.....:........:........:..x.....:..x.....x.:.x.......:..:........:..:x.x...:....:.....:..:..........:......x..x.------:...:.....:.--...x:..-....:.:..-----.....xx..x.xx......:.. 121M6D12M2I7M1I9M5I22M 133/171 77.8% 179/94230402 0.0% 14/171 8.2% 16430112 NA +5474 chr4 + 190214555 39323333 39323332 39323420 88 ATGCCACCTTTTTGGTCTTGGGTTCTTCATCCAACATGGCTAATGTTCTGGCAAACTCTTCATCTTCATGCAACTGCCTCTCCAGCTG chr4 - 94230402 22890145 22890144 22890232 71340171 71340170 71340258 88 ATTCAACCTTTTTCTTCTGTGGTGTTTCATCCAACATTGCCAAAGTTCTCGCAAATTCCTCATCTTCATGCAGCTGTCTCTCCAGCTG ..x.x........xx...xx...x:............x..:..x.....x.....:..:.............:...:........... 88M 72/88 81.8% 88/94230402 0.0% 0/88 0.0% 16433188 NA +4423 chr4 + 190214555 39326560 39326559 39326664 105 TACCTCCGCATCTTCATCAAGCTGTAATTGCTTGGCGATGGCTTCATCATTTAATCCAGACTCATCTGTATTTTGTGAAAGCTATATTTCAAAGAAAATCAAGCA chr4 - 94230402 22891485 22891484 22891586 71338817 71338816 71338918 102 TACCTCCGAATCTTCTTCAAGCTGCAGTTGCCTAGCAATGGCCTCATCATCTAGT---GTGCTGTCTCTGCTTTCTGAAGGCTATAAGAAAAAAAAAGACCAACA ........x......x........:.:....:.:..:.....:.......:..:.---.xx:::...x.::...x....:......xxxx...:...:x.x.:.. 55M3D47M 73/102 71.6% 102/94230402 0.0% 3/102 2.9% 16435075 NA +10524 chr4 + 190214555 39327515 39327514 39327766 252 AACACTTACCTCTTTTCTTTTGCTTGCCACCATCTTCTTATTAGATCTTTGGACACTTCCAGTTCCAAAATAATCAAGTACTGATGTGGGTGTAAGTTTTATTGGTGATAAAGGCTTATTCTTGGTCTTAGTGTTTTCTTCATTCTTTTTCATGTTTGATGTTCCAAGATGACTATTTGTAGATCTTCCATTCTCTTTTGATTTAGAGGCCGCCTTCTTACACATAAAGTCATCTTCTTCATCTTAA-ATGAA chr4 - 94230402 22892273 22892272 22892525 71337878 71337877 71338130 253 AGTACTCACTTCCTTCCTTTTACTTGCTACCAGTTTCTTTTCTGATCGCTGGACACTTCTTGTCCCAAAGTAATCAAGAGCTGAGGTGGGAGTCAGTTTCACTGGAGACAGCGGTTTGGTTTTAGCCTGTGGCTTTACATCTCCTTTTTTCACTGTAGCTGTTCCTGGACAACTGATTGCTGATGTCCCATTCTCCTTCGGTTTCAGGGAAATTCTTTTACTGACAAAGTCATCCTCTTCATCTAAATATGAA .::...:..:..:..:.....:.....:....x:.....x.:x....x:..........:x..:.....:........x:....x.....x..x.....:.:...x..:.:x..:..:x.:..:.:..xx.xx...x.x..x:::.......:xx.x.x......x:..::...:x...:x...x.:........:..:.:...x::..xx::::.:....xx.:.........:.........x..-..... 247M1I5M 173/252 68.7% 253/94230402 0.0% 1/252 0.4% 16435242 NA +4671 chr4 + 190214555 39345397 39345396 39345488 92 TTACCTGAATCATAGATGATCCTCTTTTTCTTGCTTGGTTGCTTTTGTTTGAAGTCATCCTCTTTACGGGAGCTATTTACCTATAAACATCA chr4 - 94230402 22905193 22905192 22905284 71325119 71325118 71325210 92 TTACCTGAATCATAGATTATTCTTTTTTTCTTGTATGCCTGCTTTTGTTTGGGAACATCTTCACTGGGTGAACTCTTCACCTAGAAGAAACA .................x..:..:.........:x..x:............:::x....:..x:.:x.x..:..x..:.....x..:x.x.. 92M 68/92 73.9% 92/94230402 0.0% 0/92 0.0% 16440204 NA +5516 chr4 + 190214555 39351339 39351338 39351479 141 AAAACTAACCTTGATTTCCTTTATTCCTTTCTTTGCTTTTAAAGTTTCTTCATCAGACTTTGTTTTCTCATTCTTCTTTACTGTTTCACTTACAAGTTTCTTTCCACTTGGTATTACTCCAAAGAATTTCCGAATGTCCTA chr4 - 94230402 22906289 22906288 22906429 71323974 71323973 71324114 141 AACACTGACCTTCGTTTCCTTTCCCCTCTTCTTCCCACTCGATTCTCCTTCCCCGTTTTTTATCTTCTCACTCTTTTTCACAGCCTCGCTCTCCTGTCGCTTTCCAGGAGGTACAACGCCAAAGAATTTCCGGATATCCTA ..x...:.....x:........x::.::.....:x.x:.::.xx:.:....x:.:xx:...:.:......:....:..:..x.::..:..:x.xx..:x.......xxx....:x..x..............:..:..... 141M 93/141 66.0% 141/94230402 0.0% 0/141 0.0% 16445050 NA +3090 chr4 + 190214555 39364064 39364063 39364133 70 AGCAAGACCTTGCCTTTAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGATAGGTCAATCCCTTAAAATG chr4 - 94230402 36762562 36762561 36762631 57467772 57467771 57467841 70 AACAAGATGAAGACTTTAAAAAAAAAAAAAAAAGAAAGGGAAAATACAGAAATTTCAAACCATTAACATG .:.....:xxx.x....................:...::...:.x:x...x.xx....x..x....x... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 2601502 NA +3355 chr4 + 190214555 39385889 39385888 39385970 82 CTGTAGCCTCAAACTTTCGGGCTCAAGTGATCCTCCTGCCTCAGCCTCTCTGGTAGCTGGGAATACTGCATATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC-ACGTGCACCACTGTG ..::....:x..:...::...:.......x.:.x.xx.x........:..x:........:.x...-:.:.:::....::.. 66M1D15M 55/81 67.9% 81/94230402 0.0% 1/81 1.2% 21188763 NA +3061 chr4 + 190214555 39398596 39398595 39398656 61 CCTCCCGATTCAAGCAATTCTTCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:..:x.:......::x...x:xx.x........::.........:.:......x...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 21201457 NA +3421 chr4 + 190214555 39400923 39400922 39400996 74 CTGCAACCTCTGCCTCCAAGGTTCAAACGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.x:.......::.x...x:xx.x........::...........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 21203797 NA +3820 chr4 + 190214555 39401975 39401974 39402052 78 AACACTCTATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACATACACACACA chr4 - 94230402 60979326 60979325 60979400 33251003 33251002 33251077 75 AATATTCTTTTCTTGTAAAAAAATAATAAAAACAAACAAAAAC---TCTATATATACACATATATACACACACACACA ..:.:...x.::..:x.......x..x.....x...x.....:---.x........:.:.........:......... 43M3D32M 59/75 78.7% 75/94230402 0.0% 3/75 4.0% -21577351 -72653051 +3134 chr4 + 190214555 39401983 39401982 39402030 48 ATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATA chr4 - 94230402 15328147 15328146 15328194 78902209 78902208 78902256 48 ATCTTTTAAAACAAAGAAGAAAGTAAAAAAAAAATATGTATGTATATA ......x....x...:..:...:x.............:...:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 24073836 NA +3492 chr4 + 190214555 39401995 39401994 39402070 76 AAAAAAAAAAAAAAAAAAAAAATATATATATATA----TATATATATATACATACACACACATATATACTTTTCATGAGT chr4 - 94230402 64360120 64360119 64360199 29870204 29870203 29870283 80 AAAAAATGTACAAAAAAATTAATATGTGTTCATAGCAGTCCATATATATACACACACACATATATAAACTATTCATGTGT ......x:x.x.......xx.....:.:.x:...----.x:...........:.......:.....x...x......x.. 34M4I42M 59/76 77.6% 80/94230402 0.0% 4/76 5.3% -24958125 -69272277 +3028 chr4 + 190214555 39401999 39401998 39402044 46 AAAAAAAAAAAAAAAAAATATATATATATATATATATATA-TACATA chr4 - 94230402 69437739 69437738 69437785 24792618 24792617 24792664 47 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATA .........x........:x...................x-...... 40M1I6M 42/46 91.3% 47/94230402 0.0% 1/46 2.2% -30035740 -64194662 +51744 chr4 + 190214555 39406770 39406769 39407794 1025 TTTTTCCATAATGAGAGAGAAG--GAGACGCGTTGGTGACTGCAATAGGGCCACCTCCCTCAAA-TTACGTTGCTCTCTATGACCCATCCTCAGTCTCCCAGTTCAAGCTAATCATTGACAGAGCTTT-ACAATCACAAGCTTTTACTGAAGCTTTGATAAGACAGTCCAGCAGTTGGTGGCAAATGAAGCCAGGCTGTGCGGCAGGATCTCCAGGGAATGAATGGATTTTCTTCAGCACTGATGAAATAA--------CCACACGCT--------ATAGGAATACAATG----TCCAACGGGGGATTGCAAAGATCTGTCATCCTGTCAGCACTTATTCTGCTACGAGCTGTTACTGGATTCTCTGGAGATGGAAGAGCTATATGGTCTAAAAATCCTAATTTTACTCCGGTAAATGAAAGTCAGCTGTTTCTCTATGACACTTTCCCTAAAAACTTTTTCTGGGGTATTGGGACTGGAGCATTGCAAGTGGAAGGGAGTTGGAAGAAGGATGGAAAAGGACCTTCTATATGGGATCATTTCATCCACACACACCTTAAAAATGTCAGCAGCACGAATGGTTCCAGTGACAGTTATATTTTTCTGGAAAAAGACTTATCAGCCCTGGATTTTATAGGAGTTTCTTTTTATCAATTTTCAATTTCCTGGCCAAGGCTTTTCCCCGATGGAATAGTAACAGTTGCCAACGCAAAAGGTCTGCAGTACTACAGTACTCTTCTGGACGCTCTAGTGCTTAGAAACATTGAACCTATAGTTACTTTATACCACTGGGATTTGCCTTTGGCACTACAAGAAAAATATGGGGGGTGGAAAAATGATACCATAATAGATATCTTCAATGACTATGCCACATACTGTTTCCAGATGTTTGGGGACCGTGTCAAATATTGGATTACAATTCACAACCCATATCTAGTGGCTTGGCATGGGTATGGGACAGGTATGCATGCCCCTGGAGAGAAGGGAAATTTAGCAGCTGTCTACACTGTGGGACACAACTTGATCAAGGTACTGTACAGCTAGCTTCT chr4 - 94230402 22917159 22917158 22918201 71312202 71312201 71313244 1043 TTTTCCTGCAGTAAGAACACAGCCGAGGTGTCCCAGTGACCACACAGAGGCCACCTCCCTAAAAATTACGCTGTTCTCT--GACCCACCCCAGGTCTCACAGTTCAGGCTAATCATTGACAGGGCTTTTACGATCACAAGCTTTTAGTGAAGCTTTGATAAGACACTCCAGCAGTTAGCGGCAAGTGAAGACAGCCTGCACAGCAGGGACTCCAGGGAATGAATGGATTTCTTTCAGTATCGGTGAAGGGAATCTGACTTTTCACGCTGGCGTTATAAAGCAGCATAATGAGTGGCCAACAG----CTGAAGAGATTTGTTGCTTTTTGGACATTAGTCGTCGTAAGGATTGTTGCTGGGCTTGCCGGAGAAGGAAGATCTGTGTGGAAAAAGGACCCCAACTCCAGTCCTGTGAATGAAACGCAGATGTTTTTGTATGACACTTTCCCCACAGAGTTTCTCTGGGGCGTAGGGACGGGGGCATTCCAGGTGGAAGGCAGCTGGAGGAAGGACGAGAGAGGACCCTCCGTCTGGGACCGCTTCATCCGCACAGAGCTCAGAGACGCTGAGAGCGCAGATGTTTCCAGTGACAGCTACACCTTGCTGGACAAAGATGTGTCAGCTCTGGATTTTTTAGGAGTTACCTTTTACCAGTTTTCAATCTCATGGTCAAGACTTTTTCCCACTGGAGTGGTGGCAGCTCCTAATGAAAAAGGACTCCAGTACTATAACACCCTTATTGACTCTCTGGTCTACAGAAATATTGACCCCGTGGTTACCCTATACCACTGGGACCTGCCCTTGACACTGCAAGAGCAATACGGAGGATGGAAAAATGAATCGGTCATTGATATTTTCAATGACTATGCCACCTTTTGCTTCCAGACCTTTGGGGATCGTGTTAAATATTGGATTACCATCCACAATCCTTATTTAGTTGCTTGGCATGGGTATGGCACGGGTATTCATGCTCCTGGAGAGAAAGGGAAAATAACCACTGTCTACGCTGTAGGACACAATCTGATCAAGGTACAGTATAATAAGGTTTT ....:.:::.:.:...:x:x..--...::.:x:::.....::..xx::............x...-.....:..:.....--......:..:x:.....x.......:...............:.....-..:..............x..................x..........:.:.....:.....x...x...::.:.....:x.....................::.....:.::.:....:x:.--------::x......--------.x..x.::.:....----x.....:.----:..x.:....:...:::::.x.x::..:.x:.:x.xx..x.:::....:....::.:x.:.....x......x..:.:...xxx..::.:..:..:.::.x...x..:.......xx...x.....:.x..............:.x.:.x...:.......::.x.....x..:.....x..:........x..:....:......:.::.:......:..::.x.....:.::.......:....x.x..:.:.:.:.::::x...:.::...x............:..:.::..x.....x.....:x.:.....:.........x........x.:.....:..:........:..x...:....:.....:...:x....:.:..::...:.x.:..:.x......x..x........:.::..:...x.x...x....:..x:x:.....:.....x..::.:.....::.............::....:...:....:.....:x....:..:..:...........xx.x:.x..x.....:.................x.x:..:.......:x........:.....:..............x..:.....:..x...:....x.................x..:.....x.....:...........:..:..xx..:.x:........:....:........::............x...:.::x..x..:. 22M2I40M1I14M2D47M1I122M8I9M8I14M4I8M4D743M 755/1019 74.1% 1043/94230402 0.0% 30/1019 2.9% 16489611 NA +39864 chr4 + 190214555 39407038 39407037 39407794 757 TGTCCAACGGGGGATTGCAAAGATCTGTCATCCTGTCAGCACTTATTCTGCTACGAGCTGTTACTGGATTCTCTGGAGATGGAAGAGCTATATGGTCTAAAAATCCTAATTTTACTCCGGTAAATGAAAGTCAGCTGTTTCTCTATGACACTTTCCCTAAAAACTTTTTCTGGGGTATTGGGACTGGAGCATTGCAAGTGGAAGGGAGTTGGAAGAAGGATGGAAAAGGACCTTCTATATGGGATCATTTCATCCACACACACCTTAAAAATGTCAGCAGCACGAATGGTTCCAGTGACAGTTATATTTTTCTGGAAAAAGACTTATCAGCCCTGGATTTTATAGGAGTTTCTTTTTATCAATTTTCAATTTCCTGGCCAAGGCTTTTCCCCGATGGAATAGTAACAGTTGCCAACGCAAAAGGTCTGCAGTACTACAGTACTCTTCTGGACGCTCTAGTGCTTAGAAACATTGAACCTATAGTTACTTTATACCACTGGGATTTGCCTTTGGCACTACAAGAAAAATATGGGGGGTGGAAAAATGATACCATAATAGATATCTTCAATGACTATGCCACATACTGTTTCCAGATGTTTGGGGACCGTGTCAAATATTGGATTACAATTCACAACCCATATCTAGTGGCTTGGCATGGGTATGGGACAGGTATGCATGCCCCTGGAGAGAAGGGAAATTTAGCAGCTGTCTACACTGTGGGACACAACTTGATCAAGGTACTGTACAGCTAGCTTCT chr4 - 94230402 22920177 22920176 22920929 71309474 71309473 71310226 753 TGGCCAACAG----CTGAAGAGATTTGTTGCTTTTTGGACATTAGTCGTCGTAAGGATTGTTGCTGGGCTTGCCGGAGAAGGAAGATCTGTGTGGAAAAAGGACCCCAACTCCAGTCCTGTGAATGAAACGCAGATGTTTTTGTATGACACTTTCCCCACAGAGTTTCTCTGGGGCGTAGGGACGGGGGCATTCCAGGTGGAAGGCAGCTGGAGGAAGGACGAGAGAGGACCCTCCGTCTGGGACCGCTTCATCCGCACAGAGCTCAGAGACGCTGAGAGCGCAGATGTTTCCAGTGACAGCTACACCTTGCTGGACAAAGATGTGTCAGCTCTGGATTTTTTAGGAGTTACCTTTTACCAGTTTTCAATCTCATGGTCAAGACTTTTTCCCACTGGAGTGGTGGCAGCTCCTAACGAAAAAGGACTCCAGTACTATAACACCCTTATTGACTCTCTGGTCTACAGAAATATTGACCCCGTGGTTACCCTATACCACTGGGACCTGCCCTTGACACTGCAAGAGCAATACGGGGGATGGAAAAATGAATCAGTCATTGATATTTTCAATGACTATGCCACCTTTTGCTTCCAGACCTTTGGGGATCGTGTTAAATATTGGATTACCATCCACAATCCTTATTTAGTTGCTTGGCATGGGTATGGCACAGGTATTCATGCTCCTGGAGAGAAAGGGAAAATAACCACTGTCTACGCTGTAGGACACAATCTGATCAAGGTACAGTATAATAAGGTTTT ..x.....:.----:..x.:....:...:::::.x.x::..:.x:.:x.xx..x.:::....:....::.:x.:.....x......x..:.:...xxx..::.:..:..:.::.x...x..:.......xx...x.....:.x..............:.x.:.x...:.......::.x.....x..:.....x..:........x..:....:......:.::.:......:..::.x.....:.::.......:....x.x..:.:.:.:.::::x...:.::...x............:..:.::..x.....x.....:x.:.....:.........x........x.:.....:..:........:..x...:....:.....:...:x....:.:..::...:.x.:....x......x..x........:.::..:...x.x...x....:..x:x:.....:.....x..::.:.....::.............::....:...:....:.....:x....:.....:...........xx.x:.x..x.....:.................x.x:..:.......:x........:.....:..............x..:.....:..x...:....x.................x........x.....:...........:..:..xx..:.x:........:....:........::............x...:.::x..x..:. 10M4D743M 555/753 73.7% 753/94230402 0.0% 4/753 0.5% 16486861 NA +3068 chr4 + 190214555 39411323 39411322 39411358 36 TTTGTTTTGTTTTGATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 46683143 46683142 46683178 47547225 47547224 47547260 36 TTTGTTTTGTTTTGGTTTTTTTTTTTTTTCTTTTTG ..............:..............:...... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -7271820 -86958582 +3181 chr4 + 190214555 39419933 39419932 39419987 55 AAACTTCATCTCAAAAAAAAAAAAAAAAAAAGGCTATTTTAAAAAGAAAAAGATA chr4 - 94230402 37391709 37391708 37391763 56838640 56838639 56838694 55 AAGCTAAATCTCAAAAAAAAAAAAAAAAAAAGGGAATTTAATAGGGAAAGAGACA ..:..xx..........................xx....x.x.::....:...:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 2028224 NA +4220 chr4 + 190214555 39420600 39420599 39420674 75 CTGCAGCCTCAACTTCCTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.....:x..x:.:.....:.......x.:.x.xx.x........::.:.........:......x....... 75M 57/75 76.0% 75/94230402 0.0% 0/75 0.0% 21223474 NA +26960 chr4 + 190214555 39434196 39434195 39434726 531 TTTTCTTCTTTTAGGCTCACTCGAAAGTTTGGCATAACTACAACACACATTTCCGCCCACATCAGAAGGGTTGGTTATCGATCACGTTGGGATCTCATTGGATCGAGCCAAACCGGTCGGAAAACACGATGGATATATTCAAATGTCAACAATCCATGGTTTCTGTGCTTGGATGGTTTGCCAACCCTATCCATGGGGATGGCGACTATCCAGAGGGGATGAGAAAGAAGTTGTTCTCCGTTCTACCCATTTTCTCTGAAGCAGAGAAGCATGAGATGAGAGGCACAGCTGATTTCTTTGCCTTTTCTTTTGGACCCAACAACTTCAAGCCCCTAAACACCATGGCTAAAATGGGACAAAATGTTTCACTTAATTTAAGAGAAGCGCTGAACTGGATTAAACTGGAATACAACAACCCTCGAATCTTGATTGCTGAGAATGGCTGGTTCACAGACAGTCGTGTGAAAACAGAAGACACCACGGCCATCTACATGATGAAGAATTTCCTCAGCCAGGTGCTTCAAGGTTGGT chr4 - 94230402 22926296 22926295 22926820 71303583 71303582 71304107 525 TTTTCTTTCACCAGGCTCATGCAAAAGTCTGGCACAACTACAAGAAGCACTTTCAACCGTATCAGAAGGGACTGATGTCCATAGTCTTGGGATCCCACTGGATCGAACCCAACAGATCGGAAGACGCTTTGGACATCTCTAAATGCCAGCAGTCTGTGGAGAGAGTACTCGGATGGTTTGCTAAACCCATCCACGGGGACGGCGATTATCCAGAGGAACTGAAAAATGAAT------CTTTTTTGCCACGCTTTACTGAGGATGAAAAAAAGTACATAAAAGGAACGGCCGACTTCTTTGCATTTTCCTTCGGTCCCGATAACTTCAAACCTCCAAACACCCTACCAAAAATGGGACAAAACTTGTCGCTCAATTTGAGGGAAGTACTGAACTGGATTAAACTGGAGTACGGCAGTCCTCGGATCTTCATTGCAGAGAACGGCTGGTTCACTGACAGCCACGTGAAAACCGATGACACCACTGCCATCTACATGATGAAAAACTTCATAAACAAGGTGTTGCAAGGTTTGT .......::x::.......:x.:.....:.....:........x.x:..:..:.:x..::..........x:x.x.:..x..x::x........:..:........:..x...x.:......:..:.xx....:..x.::.....:..:..:..::...xxxxx..:..:...........:..x..:.....:.....:.....:..........::x...:...x:.:.------.:x..:.:..xxx:..:x....:.xx..:..:x.xx.x..:.:...x..:..:..:........x.....:..:..x...:.:........:..:.:.......x.:x.x..............:x.x..:..:.....:..:....::....................:...::..::.....:.....x.....x.....:...........x.....:.::........x..x........x.................:..:...x.x.:.x.....:.x.......x.. 231M6D294M 385/525 73.3% 525/94230402 0.0% 6/525 1.1% 16507900 NA +13466 chr4 + 190214555 39437714 39437713 39437963 250 TTTCTCT-GTGCAGCAATAAGGTTAGATGAAATACGAGTGTTTGGTTATACTGCCTGGTCTCTCCTGGATGGCTTTGAATGGCAGGATGCTTACACCATCCGCCGAGGATTATTTTATGTGGATTTTAACAGTAAACAGAAAGAGCGGAAACCTAAGTCTTCAGCACACTACTACAAACAGATCATACGAGAAAATGGTTTTTCTTTAAAAGAGTCCACGCCAGATGTGCAGGGCCAGTTTCCCTGTGACT chr4 - 94230402 22928293 22928292 22928543 71301860 71301859 71302110 251 TTTCTCTCATGCAGCTATTAAATATGACAACATAGATGTGTTCGGTTACACAGCCTGGTCACTCCTTGATGGCTTTGAATGGCAACATGCCTACAAAATCCGGCGTGGATTATTTTAGGTGGATTTCAAAAGTGAAAAAAAGGAACGGATTCCCAAGTCATCTGCACTTTACTATAAACAAATCATACAGGAAAATGGCTTCTTCCCAAGAGAGTCTACACCAAGTGTTCAAGCTCAGTTTTCCTGTGACT .......-:......x..x.::.xx..::.x...x:x.....:.....:..x........x.....x.................:x....:....xx.....x..x...........x........:..x...:..x.:..:..:....xx..:.....x..x....x:.....:.....:.......::........:..:.::::..:......:..:...::...x..:.x:......:......... 7M1I243M 190/250 76.0% 251/94230402 0.0% 1/250 0.4% 16509421 NA +16816 chr4 + 190214555 39437714 39437713 39438000 287 TTTCTCT-GTGCAGCAATAAGGTTAGATGAAATACGAGTGTTTGGTTATACTGCCTGGTCTCTCCTGGATGGCTTTGAATGGCAGGATGCTTACACCATCCGCCGAGGATTATTTTATGTGGATTTTAACAGTAAACAGAAAGAGCGGAAACCTAAGTCTTCAGCACACTACTACAAACAGATCATACGAGAAAATGGTTTTTCTTTAAAAGAGTCCACGCCAGATGTGCAGGGCCAGTTTCCCTGTGACTTCTCCTGGGGTGTCACTGAATCTGTTCTTAAGGTAAG chr4 - 94230402 22971887 22971886 22972174 71258229 71258228 71258516 288 TTTCTCTCATGCAGCTATTAAATATGACAACATAGATGTGTTCGGTTACACAGCCTGGTCACTCCTTGATGGCTTTGAATGGCAACATGCCTACAAAATCCGGCGTGGATTATTTTATGTGGATTTCAAAAGTGAAAAAAAGGAACGGATTCCCAAGTCATCTGCACTTTACTATAAACAAATCATACAGGAAAATGGCTTCTTCCCAAGAGAGTCTACACCAAGTGTTCAAGCTCAGTTTTCCTGTGACTTCTCCTGGGGTATCACTGAGTCTGTTCTCAAGGTAAG .......-:......x..x.::.xx..::.x...x:x.....:.....:..x........x.....x.................:x....:....xx.....x..x....................:..x...:..x.:..:..:....xx..:.....x..x....x:.....:.....:.......::........:..:.::::..:......:..:...::...x..:.x:......:....................:.......:........:........ 7M1I280M 225/287 78.4% 288/94230402 0.0% 1/287 0.3% 16465827 NA +3078 chr4 + 190214555 39438108 39438107 39438163 56 TATGGAGGTTATGAAGGAGAGCTAGGGAAAGAGAAGGGAGAAAAAGAAGGAAATAA chr4 - 94230402 35162190 35162189 35162245 59068158 59068157 59068213 56 TATTGGGGATGCAGAGGGGAGAAAGGGAGGGAGAGGGGAGAAAAGGAAGAAAATAA ...x.:..x.::::...:...xx.....::....:.........:....:...... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 4275918 NA +3112 chr4 + 190214555 39439436 39439435 39439491 56 TTGTTTTTTGTTGCTGTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGAGACAGA chr4 - 94230402 86091847 86091846 86091902 8138501 8138500 8138556 56 TTGTTGTTTGTTGCTGTTGTTTTGGTTATTTTTCTCCTTTCTTTCTTTGAGTCAAA .....x.................x...x..x..:.:x...:.x.:......x..:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -46652411 -47577991 +3608 chr4 + 190214555 39439743 39439742 39439821 79 CTGCAACCTTCGCCTCCTGGGTTCAAGCAATTGTCCTGTCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGTGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:...........::x..xx.xx.x........:............:......--....::.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 21242617 NA +3709 chr4 + 190214555 39442509 39442508 39442583 75 CTGCAACCTCTGCCTCCCGGGTTCAAGAGATTCCCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGCCCC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:..:..:xx:x..:.:.........x.x...x.xx.x.........:...........:.:....x....x.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 21245383 NA +54745 chr4 + 190214555 39446324 39446323 39447480 1157 TTTCACAGCCCGAGTCTGTGGCTTCGTCCCCACAGTTCAGCGATCCTCATCTGTACGTGTGGAACGCCACTGGCAACAGACTGTTGCACCGAGTGGAAGGGGTGAGGCTGAAAACACGACCCGCTCAATGCACAGATTTTGTAAACATCAAAAAACAACTTGAGATGTTGGCAAGAATGAAAGTCACCCACTACCGGTTTGCTCTGGATTGGGCCTCGGTCCTTCCCACTGGCAACCTGTCCGCGGTGAACCGACAGGCCCTGAGGTACTACAGGTGCGTGGTCAGTGAGGGGCTGAAGCTTGGCATCTCCGCGATGGTCACCCTGTATTATCCGACCCACGCCCACCTAGGCCTCCCCGAGCCTCTGTTGCATGCCGACGGGTGGCTGAACCCATCGACGGCCGAGGCCTTCCAGGCCTACGCTGGGCTGTGCTTCCAGGAGCTGGGGGACCTGGTGAAGCTCTGGATCACCATCAACGAGCCTAACCGGCTAAGTGACATCTACAACCGCTCTGGCAACGACACCTACGGGGCGGCGCACAACCTGCTGGTGGCCCACGCCCTGGCCTGGCGCCTCTACGACCGGCAGTTCAGGCCCTCACAGCGCGGGGCCGTGTCGCTGTCGCTGCACGCGGACTGGGCGGAACCCGCCAACCCCTATGCTGACTCGCACTGGAGGGCGGCCGAGCGCTTCCTGCAGTTCGAGATCGCCTGGTTCGCCGAGCCGCTCTTCAAGACCGGGGACTACCCCGCGGCCATGAGGGAATACATTGCCTCCAAGCACCGACGGGGGCTTTCCAGCTCGGCCCTGCCGCGCCTCACCGAGGCCGAAAGGAGGCTGCTCAAGGGCACGGTCGACTTCTGCGCGCTCAACCACTTCACCACTAGGTTCGTGATGCACGAGCAGCTGGCCGGCAGCCGCTACGACTCGGACAGGGACATCCAGTTTCTGCAGGACATCACCCGCCTGAGCTCCCCCACGCGCCTGGCTGTGATTCCCTGGGGGGTGCGCAAGCTGCTGCGGTGGGTCCGGAGGAACTACGGCGACATGGACATTTACATCACCGCCAGTGGCATCGACGACCAGGCTCTGGAGGATGACCGGCTCCGGAAGTACTACCTAGGGAAGTACCTTCAGGAGGTGCTGAAAGGTAAG chr4 - 94230402 22972976 22972975 22974132 71256271 71256270 71257427 1157 TTCCCCAGGCGGAGTCCGTGGCTTCCTCACCCCAGTTCTGCGACCCAAACCTCTACCTGTGGAACATCACAGGAGATGGGCTCCTGCACAAAGTGGAAGGAGTGAAACTAAAAACCCGGCCGGCACAGTGTACGGATTTCGTCAGTATTAAAAAGCAACTTGACCTCCTGGAAAAAATGAAAGTCACCCACTACAGATTTGCACTTGACTGGTCGCTGATTTTACCCAATGGAGATTTGTCAGTGGTCAACAGACAGGTGCTGAGGTATTACAGATGCGTGATTAGCGAAGTGCTAAAACTCAACATCCAGTCTATGGTCACCCTGTACTACCCAACGCACGCCTACCTGGGCCTGCCGGGCCCTTTGCTGCAGACAGGAGGGTGGCTCAACCGGTCTACAGCCTACGCTTTTCAAGACTACGCGGCTTTATGCTTTCAGGAGCTTGGTGATTTGGTTAAGCTCTGGATTACAATAAATGAGCCTAACCGACTCAGCGACGTCTACAACAGGAGCAGCAGTGACACATACCGGGCAGCGCACAATTTACTAATAGCGCATGCCATGGCCTGGAGAACATACGACGAGCAGTACCGCTCCTTCCAGTACGGCAAAGTGTCCCTATCCCTGCACTCGGATTGGGCCGAGCCTGCCAACCCCTACTTTGAGTCCCATGCCAAAGCTGCCAACAGGTTCCTTCAGTTTGAAATAGGCTGGTTTGCCGACCCCATATTTAAGACCGGGGACTATCCAGCTACAATGAGGGAATACATCCACTTTAAAAACAGAAAAGGCCTCTCACACTCTTCACTGCCGTCTTTCACAAGCGAGGAAAGGAAGCTCATTAAAGGTGCAGCTGACTTCTATGCGCTGAATCACTTCACCACACGATTTGTGATTCACGAGCCCCAGAACGGGAGCCAGTATGAGTTTGACCGTGACATCCAGTTCCTGCAGGACATCACCTGCCTGAGCTCCCCTTCCCGGCTGGCAGTGGTGCCCTGGGGAGTGCGCAAGGTTCTGAAGTGGATTAAAAGAACCTACGGTGACATAGATATCTACATCACAGCAAACGGAATAGATGACCAGTCCTTGGACAACGATGAGCTTCGGAACTATTACTTAGAAAAATACGTACAAGAGGTTTTAAAAGGTGAG ..:.x...x.x.....:........x..x..x......x....:..xx.:..x...x........::...x..x:.::.:..x:.....x:.........:....::..:.....x..:..x..x..:..:..:.....:..x.::..:.....:........xx.x:...x..:...................x.:.....x..x..:...x.x::.:.::.x....x...x:.::....x.:...x...x......:x........:.....:......:.:..:..:.x...:..:..:::....:xxx.x..............:..:..:..x......:....:.....x..x.:x...:..:....x:.x.:x........x....x:..x..:...x.x..:..:..:.x......x.xx:.:.....:........x..x..::....x...........:..x..x..:...........:..x..:...:........x.xxx::...::.....x...x....:........::.:..::.:..x..:...x........x.xx:x......x:.....x.x.x:...:x...::...x:xx.....x..:..x......x....:.....x..:..:...........:x:...x..x..:xxx.::..x...:.xx.x.....x.....:..:..x.x......:.....x..xx.x..:..............:..x..x:.x..............:xx..::..:x..x..x::..x..:..xx:...xx.x......:x::....x::x.xx.......:...xx.:..:..::.:.::.......::.....x..:...........xx.:..:.....x.......xx.x.:x...x....:x..:..x.:x...x.x...........:...............:.............:x.x..x.....x...:.x........:.........x.x...x:....:.:x::..:.x......:.....:..:..:........x..x.::..x..x..:......x.::....x:.:..:x:...:.....x..:...:...::..:...x.x..:.....x:.:......:.. 1157M 823/1157 71.1% 1157/94230402 0.0% 0/1157 0.0% 16473348 NA +15375 chr4 + 190214555 39448266 39448265 39448839 574 ATTTGTGATTAATGTTAA----TTTCTTATCTTTTTC-----AGCATACCTGATTGATAAAGTCAGAATCAAAGGCTATTATGCATTCAAACTGGCTGAAGAGAAATCTAAACCCAGATTTGGATTCTTCACATCTGATTTTAAAGCTAAATCCTCAATACAATTTTACAACAAAGTGATCAGCAGCAGGGGCTTCCCTTTTGAGAACAGTAGTTCTAGATGCAGTCAGACCCAAGAAAATACAGAGTGCACTGTCTGCTTATTCCTTGTGCAGAAGAAACCACTGATATTCCTGGGTTGTTGCTTCTTCTCCACCCTGGTTCTACTCTTATCAATTGCCATTTTTCAAAGGCAGAAGAGAAGAAAGTTTTGGAAAGCAAAAAACTTACAACACAT---------ACCATTAAAGAAAGGCAAGAG---------------------AGTTGTTAGCTAAACTGATCTGTCTGCATGATAGACAGTTTAAAA-------------ATTCATCCCAGTTCCATATGCTGGTAACTT---------ACAGGAGATATACCTGTAT-TATAGAAAGACAATCTGAGATACAGCTGTAACCAAGGTGATGACAATTGTCTCTGCTGTGTG---GTTCAAAGAA chr4 - 94230402 22976522 22976521 22977148 71253255 71253254 71253881 627 ATTTATTAGCAATATTAACAACTCTCTTCTTTTTTTCCTCCCAGCATACTACGTTGACAAAGTCAAGGTTAGAGGCTACTATGCATTTAAACTGACCGAAGAAAAATCTAAGCCCAGATTTGGATTCTTCACCTCCGACTCAAAAGGAAAGCCTTCAATAAAATTTTACAACAACCTGATAAGCAATAACGGCTTTCCTGCCGACTAC------TCTGTCTGTGATCCGTCCAACAACGAGAAGCAGTGTAGCTTCTGTTTGTTTGTTTCTCAGAAGAAGCCATTCATATTCTTTGCCTGCTGTCTTTTCTCCACTCTGATCTTGCTTTTAACTATTATTGTTTTTCACAAAAGAAAAAAAAGAAAACGTTTCAAGGCAAAGAGGATCCAGCACATCTGTGGGTCACTTTAATAAGGGGGCACGAGCCCACTTTGAACAGGATTCATGGCTGTGCATTCTACAGAGGACCATACAGAATAGGCAACTGCAGAAAAGCACTATGTGAGTCACTCCAGTTATATACACCGAACACCTCAGCTGAAAACAGAAG--GTAACTGTATGCACAGGAAGACGAGCTATGATAC--CTGCTTCT--GGTGAAATCACTTTTCTCTACTTTCTGTATGTATAAAGAA ....:.x.x:...:....----.:....x.:......-----.......:xx:....:.......:::.:.:......:........:......:.:.....:........:....................x..:..:.:x....xx..::.:......x.............xx....x....::.:x.....:...x::..xx..------...:xx..:::..x.x..x.x:.x:.x.x:x....:.x:x....:..:..:x..x:x........:...:.x......:.x.x:..:..::.:........:...:.::.:..:...x.x...::::.......x.::x::..:.:......::x..xx..:.....:.:xx.x..:.....---------..:x.x.x.::::....x...---------------------:.:...xx::.xx..x..xxxx:x.:..x:....:..::.xx.:.-------------.x...::......x:...::.:.:xx..:.---------....:..--:..x......-:.:..:.....:.x..:x.....--...:xx.:--.....x:x..x..x.....:..x.x..---..x:...... 18M4I15M5I166M6D182M9I21M21I45M13I30M9I7M2D10M1I23M2D8M2D27M3I10M 374/562 66.5% 627/94230402 0.0% 77/562 13.7% 16471744 NA +15100 chr4 + 190214555 39448267 39448266 39448839 573 TTTGTGATTAATGTTAAT--TTCTTATCTTTTTC----AGCATACCTGATTGATAAAGTCAGAATCAAAGGCTATTATGCATTCAAACTGGCTGAAGAGAAATCTAAACCCAGATTTGGATTCTTCACATCTGATTTTAAAGCTAAATCCTCAATACAATTTTACAACAAAGTGATCAGCAGCAGGGGCTTCCCTTTTGAGAACAGTAGTTCTAGATGCAGTCAGACCCAAGAAAATACAGAGTGCACTGTCTGCTTATTCCTTGTGCAGAAGAAACCACTGATATTCCTGGGTTGTTGCTTCTTCTCCACCCTGGTTCTACTCTTATCAATTGCCATTTTTCAAAGGCAGAAGAGAAGAAAGTTTTGGAAAGCAAAAAACTTACAACACAT---------ACCATTAAAGAAAGGCAAGAG---------------------AGTTGTTAGCTAAACTGATCTGTCTGCATGATAGACAGTTTAAAA-------------ATTCATCCCAGTTCCATATGCTGGTAACTT---------ACAGGAGATATACCTGTAT-TATAGAAAGACAATCTGAGATACAGCTGTAACCAAGGTGATGACAATTGTCTCTGCTGTGTG---GTTCAAAGAA chr4 - 94230402 22932292 22932291 22932914 71297489 71297488 71298111 623 TTTATTAGCAATATTAACAACTCTCTTCTTTTCCTCCCAGCATACTACGTTGACAAAGTCAAGGTTAGAGGCTACTATGCATTTAAACTGACCGAAGAAAAATCTAAGCCCAGATTTGGATTCTTCACCTCCGACTCCAAAGGAAAGCCTTCAATAAAATTTTACAACAACCTGATAAGCAATAACGGCTTTCCTGCCGACTAC------TCTGTCTGTGATCCGTCCAACAACGAGAAGCGGTGTAGCTTCTGTTTGTTTGTTTCTCAGAAGAAGCCATTCATATTCTTTGCCTGCTGTCTTTTCTCCACTCTGATCTTGCTTTTAACTATTATTGTTTTTCACAAAAGAAAAAAAAGAAAACGTTTCAAGGCAAAGAGGATCCAGCACATCTGTGGGTCACTTTAATAAGGGGGCACGAGCCCACTTTGAACAGGATTCGTGGCTGTGCATTCTACAGAGGACCATACAGAATAGGCAACTGCAGAAAAGCACTATGTGAGTCACTCCAGTTATATACACCGAACACCTCAGCTGAAAACAGAAG--GTAACTGTATGCACAGGAAGACGAGCTATGATAC--CTGCTTCT--GGTGAAATCACTTTTCTCTACTTTCTGTATGTATAAAGAA ...:.x.x:...:....:--:...:x......:.----.......:xx:....:.......:::.:.:......:........:......:.:.....:........:....................x..:..:.::....xx..::.:......x.............xx....x....::.:x.....:...x::..xx..------...:xx..:::..x.x..x.x:.x:.x.x:x:...:.x:x....:..:..:x..x:x........:...:.x......:.x.x:..:..::.:........:...:.::.:..:...x.x...::::.......x.::x::..:.:......::x..xx..:.....:.:xx.x..:.....---------..:x.x.x.::::....x...---------------------:.:...xx::.xx..x..xxxx:x.:..x:....:..::.xx.:.-------------.x...::......x:...::.:.:xx..:.---------....:..--:..x......-:.:..:.....:.x..:x.....--...:xx.:--.....x:x..x..x.....:..x.x..---..x:...... 18M2I14M4I166M6D182M9I21M21I45M13I30M9I7M2D10M1I23M2D8M2D27M3I10M 370/561 66.0% 623/94230402 0.0% 74/561 13.2% 16515975 NA +10648 chr4 + 190214555 39454541 39454540 39454993 453 TCTTATTCATCAGCCTGCTGAACAGTTCCTTTTTCAGAGACATAGATACCATCCAAAAATTTCCTGATATCCTTGTTTTTAACTGTTGTGGCTTGCTGAATCAAAGCCGCTATAGGAGTGAAGATAAAGCA----------------------------ATTAATACATCAGC---CTAACCCATCTTAAAAAGAAAGTATTT----------CATTATGTGCTGTACTTAAAATTTCAGAATGTGACCTTTT-----TATTTTCACA---------------ATTTAAAAAGCTAATCAAATAAAAATTAGCAAA---------ATACTGTATTTTAAAC-AAGATTTAGACAAAATCTTGTAGGCATAGTTAGA-----CATAGTAAACA---TACAAACCTGAATTTGAAACAAGCTCAATGTCATTTCCTTCAAGGATTAATTCATCTTTCTGGGCTTGAGATACTGAACAAGCAACACCTA-AAAGGGGAGAGGGCATTTGCACAGCATCAAATCTGTGTAAAAAATA chr4 - 94230402 22936018 22936017 22936542 71293861 71293860 71294385 525 TTCTACTCATCTGCCTGCTGTACTGTTCCTTTCTCGGAGACGTAGATACCGTCCAAGAATTTCCTGATATCCTTATTCTTGACTGTAGTGGCTTGCTGGATCAAGGCAGCTAT--GAACAAAGCAAAACCATAAGCGTAAGAGATCCAAACACAGTGTCTCTAGTATTTTAACTAATAAAACCATCACATGGAGAAGGGAATTATCAACTTGAAATCATGT-CAGTTCTAAAGAAAAAGGGATGCGTTTCACTCAGTGTATCTTGGCAACACGAGGCAGAAACATCTGAGCTGTCATTTACTTCAGCATTGGAGAAGAAGGACAGGAATTGTTTGCTAAACTGACATCTCCAGATAAACTCAAACATATCATTATATTTTCCCTTGCAACTACTTCACAAACCTGAATTGGAGACCAATTCAATGTCATTCCCTTCAAGGATCAGCTCATCTTTCTGGGCTTGAGAAACAGCACAGGAAACACCTACAGAAAAGAAAATGCACAAACTTGGTATCA-----GTGAAGACAATA .::..:.....x........x..x........:..:.....:........:.....:.................:..:..:.....x...........:.....:..x.....--..:::...xx...x..----------------------------x:..:..:x.:.:.---:x..x.....x:.x::....:.x.x..----------x..:....-.x..x..x..:.xxxx:.:...:.x:::x:.-----...:..x:..---------------..:.:.:xx.::.x.:.xx.x.:x...:.x:..---------:x.:...x.x:.....-:.x..:.xx.x.x..x..::x.x::..x:...x.-----.x.x.:..x:.---:.............x..:..x.::...........:...........:.::....................x..x.x...:.x........-.:.:::..:.:x...:xx:.x::.:....-----...x.:.x.... 113M2D16M28I14M3I27M10I8M1D31M5I10M15I33M9I16M1I34M5I11M3I91M1I29M5D12M 303/445 68.1% 525/94230402 0.0% 88/445 19.8% 16518523 NA +8701 chr4 + 190214555 39454565 39454564 39454962 398 GTTCCTTTTTCAGAGACATAGATACCATCCAAAAATTTCCTGATATCCTTGTTTTTAACTGTTGTGGCTTGCTGAATCAAAGCCGCT-----------------ATAGGAGTGA-AGAT---AAAGCAAT-----TAATACATCAGCCTA---ACCCATCTTAAAAAGAAAGTATTTC----------ATTATGTGCTGTACTTAAAATTTCAGAATGTGACCTTTT-----TATTTTCACAA---------------TTTAAAAAGCTAATCAAATAAAAATTAGCAAAATA---------CTGTATTTTAAAC-AAGATTTAGACAAAATCTTGTAGGCATAGTTAGA-----CATAGTAAACAT---ACAAACCTGAATTTGAAACAAGCTCAATGTCATTTCCTTCAAGGATTAATTCATCTTTCTGGGCTTGAGATACTGAACAAGCAACACCTA-AAAGGGGAGAGGGCA chr4 - 94230402 22980779 22980778 22981253 71249150 71249149 71249624 475 GTTCCTTTCTCGGAGACGTAGATACCGTCCAAGAATTTCCTGATCTTTTTATTCTTGACTGTAGTGGCTTGCTGGATCAAGGCACCTTTGAACAAAGCAAAACCATAAGCGTAAGAGATCCAAACACAGTGTCTCTAGTATTTTAACTAATAAAACCATCACACGGAGAAGGGAATTATCAACTTGAAATCATGT-CAGTTCTAAAGAAAAAGGGATGCGTTTCACTCAGTGTATCTTGGCAACACGAGGCAGAAACATCTGAGCTGTCATTTACTTCAGCATTGGAGAAGAAGGACAGGAATTGTTTGCTAAACTGACATCTCCAGATAAACTCAAACATATCATTACATTTTCCCTTGCAACTACTTCACAAACCTGAATTGGAGACCAATTCAATGTCATTTCCTTCAAGGATCAGCTCATCTTTCTGGGCTTGAGAAACAGCACAGGAAACACCTACAGAAAAGAAAATGCA ........:..:.....:........:.....:...........x.::..:..:..:.....x...........:.....:..xx..-----------------...:.x..:.-....---..x:..:.-----..:..:x.:.:.:x.---.x.....x:.x::....:.x.x..x----------..:....-.x..x..x..:.xxxx:.:...:.x:::x:.-----...:..x:...---------------.:.:.:xx.::.x.:.xx.x.:x...:.x:..:x.---------:...x.x:.....-:.x..:.xx.x.x..x..::x.x::..x:...x.-----.x.x.:..x:.:---.............x..:..x.::.......................:.::....................x..x.x...:.x........-.:.:::..:.:x... 87M17I10M1I4M3I8M5I15M3I25M10I7M1D31M5I11M15I35M9I13M1I34M5I12M3I90M1I15M 271/397 68.3% 475/94230402 0.0% 79/397 19.9% 16473786 NA +9780 chr4 + 190214555 39456396 39456395 39456548 153 ATGCACATACCTGGTCTCATCCGAACCCTGCGGATATATTTTTCACCCAAGAAATTTCGGATTTCAACAAGAGACCCATTCTCCTGGATAACAACGTTGATGGGGAAGTGAGCATACACAGACCTCATCTTGTAACGGAAGCCCTATGTTAAA chr4 - 94230402 22983202 22983201 22983354 71247049 71247048 71247201 153 ATGGACTCACCTGGCCTCATGCGCACCCTGCGAATGTACTTCTCTCCCAAAAAGTTTCGGATTTCCACAAGTGAGCCGTTATCCTGTATGACTACATTGATTGGGAAGTGAGCGTACACCGACCTCATCTTATAACGGAAGCCCTACGATAAA ...x..x:......:.....x..x........:..:..:..:..x.....:..:...........x.....x..x..:..x.....x..:..x..:.....x...........:.....x...........:..............:.x.... 153M 125/153 81.7% 153/94230402 0.0% 0/153 0.0% 16473194 NA +9985 chr4 + 190214555 39456396 39456395 39456548 153 ATGCACATACCTGGTCTCATCCGAACCCTGCGGATATATTTTTCACCCAAGAAATTTCGGATTTCAACAAGAGACCCATTCTCCTGGATAACAACGTTGATGGGGAAGTGAGCATACACAGACCTCATCTTGTAACGGAAGCCCTATGTTAAA chr4 - 94230402 22938738 22938737 22938890 71291513 71291512 71291665 153 ATGGACTCACCTGGCCTCATGCGCACCCTGCGAATGTACTTCTCTCCCAAAAAGTTTCGGATTTCCACAAGTGAGCCGTTATCCTGTATGACTACATTGATTGGGAAGTGAGCGTACACAGACCTCATCTTATAACGGAAGCCCTACGATAAA ...x..x:......:.....x..x........:..:..:..:..x.....:..:...........x.....x..x..:..x.....x..:..x..:.....x...........:.................:..............:.x.... 153M 126/153 82.4% 153/94230402 0.0% 0/153 0.0% 16517658 NA +7734 chr4 + 190214555 39457581 39457580 39457699 119 CTTACCAGTGTAACACCCTTGATCATGTTCTGTACATGACTACAAATAGTCCGAACGGTAGCCAGTTCCTTTCTGTTACCCCACCATTTGTCAACCCGGAGCTGTAACAGAACAAAAAA chr4 - 94230402 22983649 22983648 22983767 71246636 71246635 71246754 119 CTTACCAGCGTAACGCCCTTTATCATGTTCTGTACATGGCTGCAAATTGTGCGGACCGTGGCCAGCTCCTTTCTGTTACCCCACCACTTGTCAACACGCAGCTATACAGAAATGAATAA ........:.....:.....x.................:..:.....x..x..:..x..:.....:....................:........x..x....:..xx::..::..x.. 119M 97/119 81.5% 119/94230402 0.0% 0/119 0.0% 16473932 NA +7734 chr4 + 190214555 39457581 39457580 39457699 119 CTTACCAGTGTAACACCCTTGATCATGTTCTGTACATGACTACAAATAGTCCGAACGGTAGCCAGTTCCTTTCTGTTACCCCACCATTTGTCAACCCGGAGCTGTAACAGAACAAAAAA chr4 - 94230402 22939185 22939184 22939303 71291100 71291099 71291218 119 CTTACCAGCGTAACGCCCTTTATCATGTTCTGTACATGGCTGCAAATTGTGCGGACCGTGGCCAGCTCCTTTCTGTTACCCCACCACTTGTCAACACGCAGCTATACAGAAATGAATAA ........:.....:.....x.................:..:.....x..x..:..x..:.....:....................:........x..x....:..xx::..::..x.. 119M 97/119 81.5% 119/94230402 0.0% 0/119 0.0% 16518396 NA +9667 chr4 + 190214555 39458185 39458184 39458491 307 AACCCTCACCCTCTTTTTTTTCTTTCCAAGAAGGCTGAGTTCTACATTGATGTGATTGAAGTCCCTCCGCAGGGTTCCTCTGGGGCCCTTCACGATAACTGTGCGTCCCTTCAGAGTAATGTCGACTA-GAAGAGAGAACACACTCGTCAGGCCACACAACGCTTGGAACGTGCAGTAAAGATGTAAGTAAAAGACATCAAGTCT---------------------CATACCATTTTCTGGAATGTCGACAGTCTGATTGCTGAGAATAGTCTTCATTCTG-AAAC-ACAAACACTGGGGGTGAGGCC--GACGCAAGGCCCGTTTTTCCACC chr4 - 94230402 22984613 22984612 22984920 71245483 71245482 71245790 308 AGCACTCACCTTCCTGCGCTTCTTCCCCAAGAGGGACAGCTCCACGTTGATGTGGTTGAAGTCTCTCCGCAGGGTTCCCCGGGGGCCCTTCACGATGACCGTGCGGCCCTTCAGGGACACGCTGACTGCAAAGCGGGCACAGAC----------------------AAACGCACGTTACAGCTGTGAG--AGCGGCAGCGGGACGGGCCTTCCAGGAGAGCGCGTACGTACCTTGCTCAGGGATGTCCACGGTCTGGTTGCTGAGGATGGTCTTCATTCTGCAAACGACAACCACAAGCTGC-AGGCCAGGAGGAAAAGCCCCTCCTTACACC .:.x......:..:.x:x:.....:..x.::...xxx..:..:..:........:........:..............:.x...............:..:.....x........:.xx.:.::....:-:...x.:.x...x..----------------------:....::.:x..x..x...:..--.:x.:..x.::.x.x---------------------.:....x.x:..x..:.....x..:.....:........:..:............-....-....x...x:.xx.:-.....--..x.x..:....x.::..x.... 128M1I15M22D22M2D15M21I55M1I4M1I15M1D5M2I23M 205/282 72.7% 308/94230402 0.0% 51/282 18.1% 16473572 NA +9667 chr4 + 190214555 39458185 39458184 39458491 307 AACCCTCACCCTCTTTTTTTTCTTTCCAAGAAGGCTGAGTTCTACATTGATGTGATTGAAGTCCCTCCGCAGGGTTCCTCTGGGGCCCTTCACGATAACTGTGCGTCCCTTCAGAGTAATGTCGACTA-GAAGAGAGAACACACTCGTCAGGCCACACAACGCTTGGAACGTGCAGTAAAGATGTAAGTAAAAGACATCAAGTCT---------------------CATACCATTTTCTGGAATGTCGACAGTCTGATTGCTGAGAATAGTCTTCATTCTG-AAAC-ACAAACACTGGGGGTGAGGCC--GACGCAAGGCCCGTTTTTCCACC chr4 - 94230402 22940149 22940148 22940456 71289947 71289946 71290254 308 AGCACTCACCTTCCTGCGCTTCTTCCCCAAGAGGGACAGCTCCACGTTGATGTGGTTGAAGTCTCTCCGCAGGGTTCCCCGGGGGCCCTTCACGATGACCGTGCGGCCCTTCAGGGACACGCTGACTGCAAAGCGGGCACAGAC----------------------AAACGCACGTTACAGCTGTGAG--AGCGGCAGCGGGACGGGCCTTCCAGGAGAGCGCGTACGTACCTTGCTCAGGGATGTCCACGGTCTGGTTGCTGAGGATGGTCTTCATTCTGCAAACGACAACCACAAGCTGC-AGGCCAGGAGGAAAAGCCCCTCCTTACACC .:.x......:..:.x:x:.....:..x.::...xxx..:..:..:........:........:..............:.x...............:..:.....x........:.xx.:.::....:-:...x.:.x...x..----------------------:....::.:x..x..x...:..--.:x.:..x.::.x.x---------------------.:....x.x:..x..:.....x..:.....:........:..:............-....-....x...x:.xx.:-.....--..x.x..:....x.::..x.... 128M1I15M22D22M2D15M21I55M1I4M1I15M1D5M2I23M 205/282 72.7% 308/94230402 0.0% 51/282 18.1% 16518036 NA +8366 chr4 + 190214555 39460781 39460780 39461016 236 TTTCTTTAGGTATTTGGGAGATATTTTTGCAGCCCAGTCAGACCGTTAAGCTCCTTGCCAGATAAAAAAAAGGAACTCCTACAGAATGGACCAGACCTTCAAGATTTTGTATCTGGTGATCTTGCAGACAGGAGCACCTGGGATGAATATAAAGGAAACCTAAAACGCCAGAAAGGAGAAAGGTAATTGAAAATTTGAGATAATTTTAA-------CGTCCCGTTCCTTTATTGTGCATTATT chr4 - 94230402 22942103 22942102 22942344 71288059 71288058 71288300 242 TTTTTTTAGGTGTCAGAGAACCACGTGTGTAACCAGTATGGAACATCGAGTTCTTTGCGTGAGGAGACAAAAAAGATTCTCCAAACTGGACCAGACTTAGAAGACTTTGTATCAGGAGATTTGGCAGATAAGAGTGTGTGGGCTGAGTATAAAGGCAATTTAAAGCGTCAGAAAGGAGAAAGGTAAATG-TAATTTCAAACAACTGTAGTTGCTTCCATGCAGTTTCTTGCATGTTCACTCTT ...:.......:.:x.:..:x:.:x.x..:.:..x:xx::..x.:.::..:..:....xx..x:.:.x...::.:x.:..x..:.x..........:.xx....:........x..x...:.x.....:.:...:::x....x...:........x..::....:..:..................x..-x.....x.:.:..:.x..:-------.:.x.x...:...xxx...x..:.x.. 189M1D19M7I27M 157/235 66.8% 242/94230402 0.0% 8/235 3.4% 16518678 NA +8405 chr4 + 190214555 39460781 39460780 39461016 236 TTTCTTTAGGTATTTGGGAGATATTTTTGCAGCCCAGTCAGACCGTTAAGCTCCTTGCCAGATAAAAAAAAGGAACTCCTACAGAATGGACCAGACCTTCAAGATTTTGTATCTGGTGATCTTGCAGACAGGAGCACCTGGGATGAATATAAAGGAAACCTAAAACGCCAGAAAGGAGAAAGGTAATTGAAAATTTGAGATAATTTTAA-------CGTCCCGTTCCTTTATTGTGCATTATT chr4 - 94230402 22986565 22986564 22986806 71243597 71243596 71243838 242 TTTTTTTAGGTGTCAGAGAACCACGTGTGTAACCAGTATGGAACATCGAGTTCTTTGCGTGAGGAGACAAAAAAGATTCTCCAAACTGGACCAGACTTAGAAGACTTTGTATCAGGAGATTTGGCAGACAAGAGTGTGTGGGCTGATTATAAAGGCAATTTAAAGCGTCAGAAAGGAGAAAGGTAAATG-TAATTTCAAACAACTGTAGTTGCTTCCATGCAGTTTCTTGCATGTTCACTCTT ...:.......:.:x.:..:x:.:x.x..:.:..x:xx::..x.:.::..:..:....xx..x:.:.x...::.:x.:..x..:.x..........:.xx....:........x..x...:.x.......:...:::x....x...x........x..::....:..:..................x..-x.....x.:.:..:.x..:-------.:.x.x...:...xxx...x..:.x.. 189M1D19M7I27M 158/235 67.2% 242/94230402 0.0% 8/235 3.4% 16474216 NA +7620 chr4 + 190214555 39462160 39462159 39462295 136 ATTTGTTAATAGATAGTTATGTTTGGCTTTCCTT-AGGTTAAGACTACCTCCATGGCTAAAGACAGAGATTCCCATGGGGAAAAATTACAATAAACTGAAAAATACTTTGCGGAATTTAAATCTCCATACAGTAAGT chr4 - 94230402 22988219 22988218 22988355 71242048 71242047 71242184 137 ATGTATTAATGTTTACATTTGTTTGATTCTTGTCCAGGCTACGACTTCCTCCATGGCTGAAAACAGAGATTCCCATGGGCAAGAATTACAATAAACTGAAAAATACCTTGAGAAGTTTAAATCTGCACACGGTAAAT ..x.:.....:xx..xx.x......::.:.:x.:-...:..x....x...........:..:.................x..:.......................:...x.:.:.........x..:..:....:. 34M1I102M 107/136 78.7% 137/94230402 0.0% 1/136 0.7% 16473941 NA +7620 chr4 + 190214555 39462160 39462159 39462295 136 ATTTGTTAATAGATAGTTATGTTTGGCTTTCCTT-AGGTTAAGACTACCTCCATGGCTAAAGACAGAGATTCCCATGGGGAAAAATTACAATAAACTGAAAAATACTTTGCGGAATTTAAATCTCCATACAGTAAGT chr4 - 94230402 22943777 22943776 22943913 71286490 71286489 71286626 137 ATGTATTAATGTTTACATTTGTTTGATTCTTGTCCAGGCTACGACTTCCTCCATGGCTGAAAACAGAGATTCCCATGGGCAAGAATTACAATAAACTGAAAAATACCTTGAGAAGTTTAAATCTGCACACGGTAAAT ..x.:.....:xx..xx.x......::.:.:x.:-...:..x....x...........:..:.................x..:.......................:...x.:.:.........x..:..:....:. 34M1I102M 107/136 78.7% 137/94230402 0.0% 1/136 0.7% 16518383 NA +6135 chr4 + 190214555 39463504 39463503 39463610 107 TCCATTTCCTTTTGCATACAGGTATGTGAGGAAGCTCGATGTCCCAATATTGGAGAGTGTTGGGGAGGTGGAGAATATGCCACCGCCACAGCCACGATCATGGTAGG chr4 - 94230402 22989311 22989310 22989417 71240986 71240985 71241092 107 TTCCTGTCTGTTTAACTTCAGGTATGTGAGGAAGCACGTTGTCCGAACATTGGGGAATGCTGGGGAGGTGGTGAATATGCTACAGCTACAGCTACTATTATGGTAAG .:.x.x..:x...:xx.x.................x..x.....x..:.....:..:..:...........x........:..x..:.....:..x..:......:. 107M 83/107 77.6% 107/94230402 0.0% 0/107 0.0% 16474193 NA +6135 chr4 + 190214555 39463504 39463503 39463610 107 TCCATTTCCTTTTGCATACAGGTATGTGAGGAAGCTCGATGTCCCAATATTGGAGAGTGTTGGGGAGGTGGAGAATATGCCACCGCCACAGCCACGATCATGGTAGG chr4 - 94230402 22944869 22944868 22944975 71285428 71285427 71285534 107 TTCCTGTCTGTTTAACTTCAGGTATGTGAGGAAGCACGTTGTCCGAACATTGGGGAATGCTGGGGAGGTGGTGAATATGCTACAGCTACAGCTACTATTATGGTAAG .:.x.x..:x...:xx.x.................x..x.....x..:.....:..:..:...........x........:..x..:.....:..x..:......:. 107M 83/107 77.6% 107/94230402 0.0% 0/107 0.0% 16518635 NA +11763 chr4 + 190214555 39465034 39465033 39465217 184 TTTCTATTCTAGTTGATGGGTGACACATGTACAAGAGGTTGCAGATTTTGTTCTGTTAAGACTGCAAGAAATCCTCCTCCACTGGATGCCAGTGAGCCCTACAATACTGCAAAGGCAATTGCAGAATGGGGTCTGGATTATGTTGTCCTGACATCTGTGGATCGAGATGGTTAGTGTGTCATCA chr4 - 94230402 22989640 22989639 22989823 71240580 71240579 71240763 184 TTCTTATTTCAGCTGATGGGTGACACGTGCACTAGAGGTTGCAGATTTTGTTCAGTAAAGACAGCAAAAAACCCACCTCCACTGGATCCTGAGGAGCCTTACAACACAGCAAAAGCTATTGCTGAGTGGGGCTTGGATTACGTTGTACTGACATCCGTGGACAGAGATGGTTAGTATGCTGTCA ..::....::..:.............:..:..x....................x..x.....x....:...:..x............x.:::x.....:.....:..x.....:..x.....x..:.....::.......:.....x........:.....:x............:..:::... 184M 147/184 79.9% 184/94230402 0.0% 0/184 0.0% 16475394 NA +11894 chr4 + 190214555 39465034 39465033 39465217 184 TTTCTATTCTAGTTGATGGGTGACACATGTACAAGAGGTTGCAGATTTTGTTCTGTTAAGACTGCAAGAAATCCTCCTCCACTGGATGCCAGTGAGCCCTACAATACTGCAAAGGCAATTGCAGAATGGGGTCTGGATTATGTTGTCCTGACATCTGTGGATCGAGATGGTTAGTGTGTCATCA chr4 - 94230402 22945198 22945197 22945381 71285022 71285021 71285205 184 TTCTTATTTCAGCTGATGGGTGACACGTGCACTAGAGGTTGCAGATTTTGTTCAGTAAAGACAGCAAAAAACCCACCTCCACTGGATCCCGAGGAGCCTTACAACACAGCAAAAGCTATTGCTGAGTGGGGCTTGGATTACGTTGTACTGACATCCGTGGACAGAGATGGTTAGTATGCTGTCA ..::....::..:.............:..:..x....................x..x.....x....:...:..x............x..::x.....:.....:..x.....:..x.....x..:.....::.......:.....x........:.....:x............:..:::... 184M 148/184 80.4% 184/94230402 0.0% 0/184 0.0% 16519836 NA +4883 chr4 + 190214555 39465276 39465275 39465382 107 TGTTTCTAGATATGCCTGATGGGGGAGCTGAACACATTGCAAAGACCGTATCATATTTAAAGGAAAGGTAC-TTATTTTTGCATTTGTGTAATTTAAGGACCTTTTTG chr4 - 94230402 22990587 22990586 22990692 71239711 71239710 71239816 106 TGCTTCTAGATATGCCTGATGGTGGAGCAGAACACTTTGCAAAGACGGTCTCCCATCTGAAAGAAAGGTACGTTAATAATGTATTACTCTTATTAAA--ACTTTATTG ..:...................x.....x......x..........x..x..x:..:.:..:.........-...x.xx..:...xx.x.x...x..--..:..x... 71M1I25M2D9M 83/105 79.0% 106/94230402 0.0% 3/105 2.9% 16474689 NA +4883 chr4 + 190214555 39465276 39465275 39465382 107 TGTTTCTAGATATGCCTGATGGGGGAGCTGAACACATTGCAAAGACCGTATCATATTTAAAGGAAAGGTAC-TTATTTTTGCATTTGTGTAATTTAAGGACCTTTTTG chr4 - 94230402 22946143 22946142 22946248 71284155 71284154 71284260 106 TGCTTCTAGATATGCCTGATGGTGGAGCAGAACACTTTGCAAAGACGGTCTCCCATCTGAAAGAAAGGTACGTTAATAATGTATTACTCTTATTAAA--ACTTTATTG ..:...................x.....x......x..........x..x..x:..:.:..:.........-...x.xx..:...xx.x.x...x..--..:..x... 71M1I25M2D9M 83/105 79.0% 106/94230402 0.0% 3/105 2.9% 16519133 NA +8368 chr4 + 190214555 39467429 39467428 39467659 231 ATACTGAACGATTACTGATAATTTCTATTTTGAGGAA-------CAGGTATGTCAGTTCTTTCTCTCTGTTTGATAATTCTCTCTTTTCCCCTTAGGAATCCAAAAATCCTTGTGGAGTGTCTTACTCCTGATTTTCGAGGTGATCTCAAAGCAATAGAAAAAGTTGCTCTGTCAGGATTAGATGTGTATGCACATAATGTAGAAACAGTCCCGGAATTACAGAGGT---------GAATACGTGTA chr4 - 94230402 22991772 22991771 22991990 71238413 71238412 71238631 219 ATATTGAACGTTTACCGACAGT---------GATAAAAATCCCACGGATGTGTTCATTTTCAGCTTCTGTTT-------------------TTCAGGAACTCAAAAATAGTTGTAGAATGCCTTACCCCCGATTTCCGAGGGGACCTTAACGCTGTGGAGAAGGTAGCACTGTCAGGGCTGGATGTGTACGCCCACAATGTGGAGACGGTTCCGGAATTACAGAGGTAAGCAAGAAGAGCACGTGTA ...:......x....:..:.:.---------..x:..-------.:.:.:...:x:..:.:xx::.......-------------------:.:.....::.......xx....:..:..:.....:..:.....:.....x..:..:..x..x:.:..:..:..x..x........::.:........:..x..:.....:..:..:..:................---------..::....... 22M9D6M7I28M19D136M9I11M 149/203 73.4% 219/94230402 0.0% 44/203 21.7% 16475657 NA +7683 chr4 + 190214555 39470017 39470016 39470168 152 AGTAAGGTTCGTGATCCTCGGGCCAATTTTGATCAGTCCCTACGTGTACTGAAACATGCCAAGAAGGTTCAGCCTGATGTTATTTCTAAAACATCTATAATGTTGGGTTTAGGCGAGAATGATGAGCAAGTATATGCAACAATGAAAGGTAA chr4 - 94230402 22948540 22948539 22948691 71281712 71281711 71281863 152 AGGAAAGTCCGCGATCCCCGAGCCAACTTCGAGCAGTCCGTCCGTGTGCTGAAGCACGCCAAGGCGGTGCAGCCCCGCGTCATCTCCAAAACCTCCCTCATGCTGGGGCTGGGCGAGACGGACGAACAGGTGCTTGCAACGATGAAGTGTGA ..x..:..:..:.....:..:.....:..:..x......x.x.....:.....:..:......:x...x.....:x::..:..:..:.....x..:x.x...:....x:.:.......xx..:..:..:..::x......:.....:x..:. 152M 108/152 71.1% 152/94230402 0.0% 0/152 0.0% 16521477 NA +7888 chr4 + 190214555 39470017 39470016 39470168 152 AGTAAGGTTCGTGATCCTCGGGCCAATTTTGATCAGTCCCTACGTGTACTGAAACATGCCAAGAAGGTTCAGCCTGATGTTATTTCTAAAACATCTATAATGTTGGGTTTAGGCGAGAATGATGAGCAAGTATATGCAACAATGAAAGGTAA chr4 - 94230402 22950506 22950505 22950657 71279746 71279745 71279897 152 AGGAAAGTCCGCGATCCCCGAGCCAACTTCGAGCAGTCCGTCCGTGTGCTGAAGCACGCCAAGGAGGTGCAGCCCCGCGTCATCTCCAAAACCTCCCTCATGCTGGGGCTGGGCGAGACGGACGAACAGGTGCTTGCAACGATGAAGTGTGA ..x..:..:..:.....:..:.....:..:..x......x.x.....:.....:..:......:....x.....:x::..:..:..:.....x..:x.x...:....x:.:.......xx..:..:..:..::x......:.....:x..:. 152M 109/152 71.7% 152/94230402 0.0% 0/152 0.0% 16519511 NA +6221 chr4 + 190214555 39471223 39471222 39471324 102 TTTCTTCCTACAGCACTTCGTGAGGCAGATGTAGACTGCTTGACTTTAGGACAATATATGCAGCCAACAAGGCGTCACCTTAAGGTACATGTATCTTGATTT chr4 - 94230402 22951856 22951855 22951957 71278446 71278445 71278547 102 TTTATTTTTACAGTGTTGCGTGAAGCAGGTGTAGATTGTTTGACTCTAGGACAATACATGCAACCAACAAAACGTCACCTAAAGGTAAATATGCCTTTAATT ...x..::.....:::.x.....:....:......:..:......:..........:.....:.......::........x......x..:.::...x.x.. 102M 79/102 77.5% 102/94230402 0.0% 0/102 0.0% 16519367 NA +3287 chr4 + 190214555 39472061 39472060 39472138 78 TGTTACATGTACTTATATATATACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACAC chr4 - 94230402 14964811 14964810 14964884 79265519 79265518 79265592 74 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTAT----GTATATACAGCCACACACATGCACACACACACAC ....:::x::..xx....:.x.:...:..:::::......----.........xx......:..:............. 40M4D34M 53/74 71.6% 74/94230402 0.0% 4/74 5.4% 24507250 NA +3128 chr4 + 190214555 39472073 39472072 39472144 72 TTATATATATACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACAC chr4 - 94230402 14964813 14964812 14964884 79265519 79265518 79265590 72 TTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.:x.:.:.x:.....x..:....::.:x:..:...::.:.:...xx:.:.....::............. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 24507260 NA +3386 chr4 + 190214555 39472074 39472073 39472284 211 TATATATATACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACACACATATATA-------CACATCTTATTCTTATGATAAAGTCAGCTAGAGAAAAAATTTTTTGA-AGAAAATCATAAGGAAAAGAAAATATATTTACTAGT--------CATTAAGTGGAAGTGGACCATCATAAAGGTCTTCATCCTCATCATCTT chr4 - 94230402 8395791 8395790 8396004 85834399 85834398 85834612 214 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTATTAATAAAGCTGTATCACAGAAAGTC------AACAGTCAGTGTATTCAGTAGCATAGAAAACATCCAGT-------TACCCTCACAGAAGACGCCATTTTCCTAGTCTT .:.:...:.::.:..:x:::...:.x..:x.:.:...:.x:...:xx...:...............x.....x..:x...-------..x.::x:.....x:::.xx...x:..x..xx:.x...::.x.x.x.-.....:..------..x..xx.:.:....:.x...:--------...:x...-------x...x...:.:.:.x.x:...::..x.x:.... 80M7I47M1I8M6D22M8I8M7D33M 123/198 62.1% 214/94230402 0.0% 29/198 14.6% 31076283 NA +3293 chr4 + 190214555 39472075 39472074 39472150 76 ATATATATACGTATGTGTGTGTGTATATCTGTATATACACACACACAT--ATACACACACACACACACACACACATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.:..:..:..::.:x:::.:...:.::....::.::.x:....--...................x.....x.. 48M2I28M 52/76 68.4% 78/94230402 0.0% 2/76 2.6% 31076287 NA +3180 chr4 + 190214555 39472083 39472082 39472157 75 ACGTATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACACACATATATACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...:......:...xx::.:...x:...:.:::..::x:...:xx.:.............:.:.x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 31076295 NA +3181 chr4 + 190214555 39472087 39472086 39472156 70 ATGTGTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACACACATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .....::.:.:...x.x..x.xx.::x:.:.:.........:...x...x...x..........x..... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 15335894 NA +3105 chr4 + 190214555 39472091 39472090 39472143 53 GTGTGTGTATATCTGTATATACACACACACATATACACACACACACACACACA chr4 - 94230402 80747807 80747806 80747859 13482544 13482543 13482596 53 GCATGTGTATAGCTATGCATACATACGCAACTATACATACATACACACACATA .::........x..:.::.....:..:..xx......:...:.........:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -41275716 -52954686 +3169 chr4 + 190214555 39472104 39472103 39472159 56 TGTATATACACACACACATATACACACACACACACACACACACATATATACACATC chr4 - 94230402 90815415 90815414 90815470 3414933 3414932 3414988 56 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACC .....:.......:..xx.:.:......:...x.....::....:...x:....:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -51343311 -42887091 +9502 chr4 + 190214555 39473062 39473061 39473257 196 ATTCTAAAATCTGATCAGAAGTAATTATTTAAATCTAGGTTGAAGAATATATTACTCCTGAAAAATTCAAATACTGGGAAAAAGTAGGAAATGAACTTGGATTTCATTATACTGCAAGTGGCCCTTTGGTGCGTTCTTCATATAAAGCAGGTAAGTTAGATTGTGGGGCATGGTT---TCATTTAGGCCGTTAACTTTC chr4 - 94230402 22952581 22952580 22952774 71277629 71277628 71277822 194 ATGTTAAGGCCTGATCAGAATGAATTCTTTTCACTCAGGTTGAGGAGTACGTAACGCCTGAAAAATTCAAATACTGGGAAAAAGTAGGAAACGATCTTGGATTCCATTACACAGCCAGTGGGCCTCTAGTGCGATCCTCCTATAAAGCAGGTAC-----ATTATGAAGCAGTATTAAATTACTTAGGATGTGACATTTC ..x:...:::..........xx....x...xx.:::.......:..:..::.x..x...................................:..x........:.....:..x..x.....x...:.:.....x..:..x.............x-----...:..::...xx:..---.:.:.....x:..x.xx.... 154M5D16M3I21M 146/191 76.4% 194/94230402 0.0% 8/191 4.2% 16520481 NA +4155 chr4 + 190214555 39477040 39477039 39477117 78 GTGTTTTCCTTTTTCCTAAATAGGTGAATTTTTCCTGAAAAATCTAGTGGCTAAAAGAAAAACAAAAGACCTCTAAAA chr4 - 94230402 22953633 22953632 22953710 71276693 71276692 71276770 78 GTGCTTTTTTGCCTCTTGATTAGGTGAATTCTTCTTGAAGAACTTGGTGGAAAAAAGAAAGACAAAAGTCATCTGAAA ...:...::.x::..:.:.x..........:...:....:..::.:....xx........:.......x.x...:... 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 16523407 NA +5797 chr4 + 190214555 39486179 39486178 39486599 421 TACTCCGTTTGACCCTGAAGCAGCTGAAAAT---CAGCACATGGTGAACACAGCATTTGTAGGACAAGCCCAGGGTGACATCAAACAGAAGCTGCAGAAATTAGAAGGGTTTACAGGCACGAATGCCACCCAGCTTATAGAGGTGGCCACTGAGGTGTATGTTAACCGTGACCAAGAGGCAAAGAAGGAAGCAGAACAGAGGCTTGAGAAAAGGGCCGATCTGTTAGCGGCAGCCCTCGTAGAAAGGGAAACTAGTATTCTAAGAGGATGTGGACGTGGACATGGATGTGGAAGAGGTCAAGTTAGGCAGAGATCTGAGAGCCGGCCGAGGCTAGAGAGAGATCAATGTACATGATGCAAAAAGAAGGGACACTGGAAGGATGAGTGTCC----AGAAGGTA----ATGAGGAGAGTAGTCAGGGCCATGGT chr4 - 94230402 29281259 29281258 29281615 64948788 64948787 64949144 357 TACTCCCCTAGACCCTGGATCAGAGGATGGTATACAACAATTGGTAT---CACTATTTATAGGGCAGTCTGCAGGTGACATCAGAAGGAAGCTGCAGAAACTAAAAGCACCAGCTGCCCAAAATTTGGAGAGTTTGTTAGAGGAGGCATGGAGAGTGTTTAGTAACCGGG---AAGAGGTAGAGAAGAGA---------AGG---GAGAAAAGAA------TGCTAATAGCAGTCCT-ACAGGAAGCAAAG--------------------------------AGAGGTGAACAAAACAAAGC---GCAAAAGCCT---------------CTAGAAAAAGATCAGTGTGCTCACTGCACGAAAAAGGGGCACTGGAAGAATGAATGCCCGCTAAAAAGGCAGGAGAGAAAAAGGGGGGCCTGGGCTAAGGT ......x:.x.......:.x...xx..x::.---..:..xx....:x---..x:....:....:..:x.:xx:..........:.x:.............:..:...x:::x:.x.x.xx:...x:x:xxx:x:.xx......x...xxxx:::....x.:x......x.---......:.:.....::.---------...---........::------..:..:::....:...-::..:...x:..:--------------------------------:..x...:.x:.:::x...:---...:.:::..---------------.....:.:......:...:.x::x....x:..:.....:.........:....:..:..----.:....:.----.x:.::..:.x:.:.x....:.x... 31M3I13M3D120M3D17M9D3M3D10M6D16M1D13M32D20M3D10M15D59M4I8M4I26M 222/346 64.2% 357/94230402 0.0% 86/346 24.9% 10204920 NA +3044 chr4 + 190214555 39495115 39495114 39495188 74 TACCATTCTTTCAACTTTTCTGTAAATCTAAAATTATGTCAGAATTTAGGGTTTTCTTTTTTTAAAAACTAGCA chr4 - 94230402 37405711 37405710 37405784 56824619 56824618 56824692 74 TACCTTTCTTTCAACCTTTCTTTCACAGAAAGATCATATCAGATTTTTTTGGTTTATTTTCTTAAAAGTAAGCA ....x..........:.....x.x.xxxx..:..:..:.....x...xxx.x...x....:......::x.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 2089404 NA +3069 chr4 + 190214555 39497888 39497887 39497942 55 AAAAAAAAAGAACAACAACAACAACAAAAGCAATTTTTTGCCAGCATTTGGCATA chr4 - 94230402 24587699 24587698 24587753 69642650 69642649 69642704 55 AAAAAAAAAGCAAAACAACAACAAAAAAAGGCAGTTTCTAAAAGTATTTGGCATA ..........x.x...........x.....xx.x...:.:xx..:.......... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 14910189 NA +7421 chr4 + 190214555 39500138 39500137 39500280 143 AATCTCTACACTTTAGGTTTCTTGTTAGGTGGATCTTGAAGACTAAACTTCGGAATTTCACCAGAAGGAGCATATGGAATTCTCTTTGAAGACACCTTTTTGCCAATTGTTTCAATCT------GAAAAAAAAATAAAATTTAAGAGAA chr4 - 94230402 22962222 22962221 22962370 71268033 71268032 71268181 149 AAACATTATACTCTGGGCTTTTTGACAGGTGGGTCCTGCAGGCTGAACTTCGGAATTTCACAGGAAGAAGCAAAAGGGATTCTTTTGGCTGACACCTTCTTCCCAATTGTTTCAATCTGGAGGGGGaaaaaaaagaaaagaaaaaagaa ..x.x:..:...:.:..:..:...x:......:..:..x..:..:................x:....:....x.x..:.....:..x.xx........:..x................------.:........x....xxx..:.... 118M6I25M 110/143 76.9% 149/94230402 0.0% 6/143 4.2% 16537916 NA +7353 chr4 + 190214555 39500138 39500137 39500280 143 AATCTCTACACTTTAGGTTTCTTGTTAGGTGGATCTTGAAGACTAAACTTCGGAATTTCACCAGAAGGAGCATATGGAATTCTCTTTGAAGACACCTTTTTGCCAATTGTTTCAATCT--------GAAAAAAAAATAAAATTTAAGAGAA chr4 - 94230402 22959318 22959317 22959465 71270938 71270937 71271085 148 AAACATTATACTCTGGGCTTTTTGACAGGTGGGTCCTGCAGGCTGAACTTCGGAATTTCACAGGAAGAAGCAAAAGGGATTCTTTTGGCTGACACCTTCTTCCCAATTGTTTCAATCTGGAGGGGGGAAAAAAAAAGAAAA---AAGAAAA ..x.x:..:...:.:..:..:...x:......:..:..x..:..:................x:....:....x.x..:.....:..x.xx........:..x................--------..........x....---....:.. 118M8I15M3D7M 111/140 79.3% 148/94230402 0.0% 11/140 7.9% 16540820 NA +6785 chr4 + 190214555 39504413 39504412 39504523 111 TTACCTTAAACATGTCCCACTCAGTGCAAATAACAACAGCATGGGCACCATCACATGCTTCATATGGATCCTTGGAAATGGTCACGAGCCGGGACACTGTAACAATAGCAA chr4 - 94230402 23004667 23004666 23004777 71225626 71225625 71225736 111 TTACCTTAAACATGTCCCATTCAGTGCAAATTACAAGGGCATGAGCTCCATCACAGGCTTCATATGGATCTTGGCTTATAGTGACCAACCGAGACACTGTAATAGAAGGAA ...................:...........x....x:.....:..x........x..............:.x.xxx..:..x..x.:...:..........:.:x..x.. 111M 90/111 81.1% 111/94230402 0.0% 0/111 0.0% 16499746 NA +6785 chr4 + 190214555 39504413 39504412 39504523 111 TTACCTTAAACATGTCCCACTCAGTGCAAATAACAACAGCATGGGCACCATCACATGCTTCATATGGATCCTTGGAAATGGTCACGAGCCGGGACACTGTAACAATAGCAA chr4 - 94230402 22964370 22964369 22964480 71265923 71265922 71266033 111 TTACCTTAAACATGTCCCATTCAGTGCAAATTACAAGGGCATGAGCTCCATCACAGGCTTCATATGGATCTTGGCTTATAGTGACCAACCGAGACACTGTAATAGAAGGAA ...................:...........x....x:.....:..x........x..............:.x.xxx..:..x..x.:...:..........:.:x..x.. 111M 90/111 81.1% 111/94230402 0.0% 0/111 0.0% 16540043 NA +9534 chr4 + 190214555 39505231 39505230 39505406 176 CCTTACCTTGGTCATCCTCTGAAACACCTGGATGAGAAAGATCCACAACTATTTGTTCCCTAGGTACTTTTGGATCATATATATGTAGATGTGCACCTTCATCCATCAAATATTTGCTAATATATATACTAGAAGATTCTCTATAGGAAAAAAAAAATCAGT----------ATTGGTAAGCTTTA chr4 - 94230402 23005904 23005903 23006089 71224314 71224313 71224499 186 CCTTACCTTGGTTGTCTTCTGAGACACCTGGATGTGACAGATCCAAGATGATTTGTTCCTTCGGTACTTTAGGGTCATAGATATGGAGCTTTGCTCCTTCATCCATTAAATACTTGCTAATGTAGATGCTGGATGACTCTCTACAGAAGAGAGTTAAACAGTTAAAGAACCAGCTGATACGCTTTA ............::..:.....:...........x..x.......x:.:x.........:.x........x..:.....x.....x..x.x...x...........:.....:........:..x..:..:..x..:......:..:.:.:.:xx..x....----------::..:..x...... 162M10I14M 137/176 77.8% 186/94230402 0.0% 10/176 5.7% 16499327 NA +9656 chr4 + 190214555 39505231 39505230 39505406 176 CCTTACCTTGGTCATCCTCTGAAACACCTGGATGAGAAAGATCCACAACTATTTGTTCCCTAGGTACTTTTGGATCATATATATGTAGATGTGCACCTTCATCCATCAAATATTTGCTAATATATATACTAGAAGATTCTCTATAGGAAAAAAAAAATCAGT----------ATTGGTAAGCTTTA chr4 - 94230402 22965607 22965606 22965792 71264611 71264610 71264796 186 CCTTACCTTGGTTATCTTCTGAGACACCTGGATGTGACAGATCCAAGATGATTTGTTCCTTCGGTACTTTAGGGTCATAGATATGGAGCTTTGCTCCTTCATCCATTAAATACTTGCTAATGTAGATGCTGGATGACTCTCTACAGAAGAGAGTTAAACAGTTAAAGAACCAGCTGATACGCTTTA ............:...:.....:...........x..x.......x:.:x.........:.x........x..:.....x.....x..x.x...x...........:.....:........:..x..:..:..x..:......:..:.:.:.:xx..x....----------::..:..x...... 162M10I14M 138/176 78.4% 186/94230402 0.0% 10/176 5.7% 16539624 NA +10028 chr4 + 190214555 39505615 39505614 39505771 157 TACCTTGTATCACCAGTGTCCTTTTTGAATGCAAATCCCAAAATAGCTATCTTCTTATCAGTTACTGTATTAAACAGACTATCTATGATCCGGGAAGCAAACCTCCTCCTCTGGTAGTCATTCATGTCTATGACCTGAAATTACATGTACAATTGTG chr4 - 94230402 23006730 23006729 23006886 71223517 71223516 71223673 157 TACCTTGTGTCCCCAGTATCTTTTTTGAATGCAAATCCTAAGATAGCAATCTTCTTATCAGTGACAGTATTGAACAGGCTGTCAATAATACGGGAAGCAAATCTGCGCCTCTGATAATCATTCATGTCTATTACCTGAAGGTATATAAAACATTATG ........:..x.....:..:.................:..:.....x..............x..x.....:.....:..:..x..:..x...........:..x.x......:..:..............x.......:x..:..:x.xx...:.. 157M 128/157 81.5% 157/94230402 0.0% 0/157 0.0% 16498885 NA +10028 chr4 + 190214555 39505615 39505614 39505771 157 TACCTTGTATCACCAGTGTCCTTTTTGAATGCAAATCCCAAAATAGCTATCTTCTTATCAGTTACTGTATTAAACAGACTATCTATGATCCGGGAAGCAAACCTCCTCCTCTGGTAGTCATTCATGTCTATGACCTGAAATTACATGTACAATTGTG chr4 - 94230402 22966458 22966457 22966614 71263789 71263788 71263945 157 TACCTTGTGTCCCCAGTATCTTTTTTGAATGCAAATCCTAAGATAGCAATCTTCTTATCAGTGACAGTATTGAACAGGCTGTCAATAATACGGGAAGCAAATCTGCGCCTCTGATAATCATTCATGTCTATTACCTGAAGGTATATAAAACATTATG ........:..x.....:..:.................:..:.....x..............x..x.....:.....:..:..x..:..x...........:..x.x......:..:..............x.......:x..:..:x.xx...:.. 157M 128/157 81.5% 157/94230402 0.0% 0/157 0.0% 16539157 NA +7231 chr4 + 190214555 39508536 39508535 39508675 140 ACAGAAATTATTACCTATAGAGATTAATACCTGCTGCCAATAACGAGCTACTTCTGGCAAATTCAGAGCCTCACAGAGATAAACCAAATTCAGAACATCCTTTTGGAAACAGCTCCCACCAAACCCTGCAGAAAGAAAAA chr4 - 94230402 23009669 23009668 23009799 71220604 71220603 71220734 131 ACAGAAGTTTT---------AAACTTGTACCTGTTGCCAGTAGCGGGCTACTTCAGGTAAGTTCAGTGCCTCACAAAGGTACACTAAATTCAAGACATCTTTCTGAAAACAGCTGCCTCCAAACCCTGAAAAAAAAAGGA ......:..x.---------.:.:.x:......:.....:..:..:........x..:..:.....x........:..:..x..:.......::.....:..:..:........x..x..........x.:...:..::. 11M9D120M 101/131 77.1% 131/94230402 0.0% 9/131 6.9% 16498867 NA +7240 chr4 + 190214555 39508536 39508535 39508675 140 ACAGAAATTATTACCTATAGAGATTAATACCTGCTGCCAATAACGAGCTACTTCTGGCAAATTCAGAGCCTCACAGAGATAAACCAAATTCAGAACATCCTTTTGGAAACAGCTCCCACCAAACCCTGCAGAAAGAAAAA chr4 - 94230402 23011295 23011294 23011425 71218978 71218977 71219108 131 ACAGAAGTTTT---------AAACTCGTACCTGTTGCCAGTAGCGGGCTACTTCAGGTAAGTTCAGTGCCTCACAAAGGTACACTAAATTCAAGACATCTTTCTGAAAACAGCTGCCTCCAAACCCTGAAAAAAAAAGGA ......:..x.---------.:.:.x:......:.....:..:..:........x..:..:.....x........:..:..x..:.......::.....:..:..:........x..x..........x.:...:..::. 11M9D120M 101/131 77.1% 131/94230402 0.0% 9/131 6.9% 16497241 NA +3659 chr4 + 190214555 39509050 39509049 39509132 83 CTGCAGCCTTGACCTCCTGGGCTCAGGTGATCCTCCTACCTTAGCCTCCCAGGTAGCTGGAGCTACAGGTGTGCACCATCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x:.x..:.....:...:...x.:.x.xx:x..:.....::..:.........:.....--:........:::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 21311924 NA +12071 chr4 + 190214555 39509742 39509741 39509951 210 AGAAAAATTTGAATTTACCAACACTGGCTTTTAGAAACTTGTTTCCAATTCTCTGGTCCATTCCAATCGCTGTTGCTACCTCTTCTACATCAGCTCCTGTTGCTTCACACAGAGCACTTATGGAGTTAATGCTGCTTATTCTCTGGGCAAGAAAAGCATTTGCTGCCTTAA----AAAAAAAAAACATAGAGAAGAGTAAGATAAGCTAAAACA chr4 - 94230402 23010582 23010581 23010788 71219615 71219614 71219821 207 AGATATTTTTCCACTCACCAACACTGGCTTTCAGAAACTTATTTCCAATTCTTTGGTCAGTTCCAATAGCTCTCGCTACTTCTTCAACATCTGCTCCTGTAGCTTCACATAGAGCACTGATTGAGTTAATGCTGCTGATTCTTTGGGCAAGGAAAGCATTAGCTGCCTGAGAATTAAAAAAAAAACAAACAAAATA-------AAACCAAAACA ...x.xx...xx.:.:...............:........:...........:.....x:.......x...x.:.....:.....x.....x........x........:........x..x..............x.....:........:........x.......x.:----............x.x.:..x.-------..:.:...... 171M4I21M7D11M 169/203 83.3% 207/94230402 0.0% 11/203 5.4% 16499160 NA +33454 chr4 + 190214555 39509742 39509741 39510866 1125 AGAAAAATTTGAATTTACCAACACTGGCTTTTAGAAACTTGTTTCCAATTCTCTGGTCCATTCCAATCGCTGTTGCTACCTCTTCTACATCAGCTCCTGTTGCTTCACACAGAGCACTTATGGAGTTAATGCTGCTTATTCTCTGGGCAAGAAAAGCATTTGCTGCCT------TAAAAAAAAAAA---------------ACATAGAGAAGAGTAAGATAAGCTAAAACAGCAATTTTATACATCTAGTTTATATTTCATTGCGTTGACGCAAATTACTGAGGG---AGATATATAAG--------------ATACTGATGAGCTCAATTTGAGGAGACAATGGATGGGTTAGAAAGGGAA--AATGTTTTAAATTAGAGAGGACAGATG--ATTAAGAAAA----------AGGGTAAAGAG--GGAAAGAGTG-ATAAAAACCA-----------------AATTACTATTTTAAGATTTCAGAATT--------TTTCAGAATCTTTTATACCCTCATATATGATCTCCCTTGTGAAAATTATTTCATAATTTGAATGT------GCAAGAATATGATCTTCAAAAGCATA------------------ACCTCTTACTACTATTAAAAAAGTATCTGTGTAGTTTATCAGGCTTGAAATAAATAAATATTTGGCTTTAATTTAATGAAGAGTTGAATGCTATATACTAACCAGTTTGGAAAGCTCTGAAGACCAAGTATTAGTGGTGAGGATCTTTTCTCTGGGAACCCAGTGCTCATATACAGCACACAGGGCCTGCACAGCTCTCTGGCCCTCTGGAGTTTCATCCCCTCCAATCAGTACTCTGTCTGGGTTCTTTAGGTCCTTGATGGCTGTTCCCTCTGCCAGAAACTCAGGGTTGGACAGCACCTAGAATCCCAATGCAAAGGAAAGTTTTAAGCTAGAATTAATTATGGGCAACTTTAACACATCAGTATTTACATAAGAATAACCAGATTCTAATGCTTCATTTTTTAT-------ACCTGTAAATTCAAGTTGGGTTTTGTGTTTGCATCAAATATGCGACGGATACTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCATTTGAGTTTTGCACAATGCGTCTAGCACAAGCTTCAATATACTTCAGATCTGCTGCCCGGCCTTTCCCCATTCCATAGGTTTTTGTTGGAGTATTCACCTGAT chr4 - 94230402 23012207 23012206 23013378 71217025 71217024 71218196 1172 AGATATTTTTCCACTCACCAACACTGGCTTTCAGAAACTTATTTCCAATTCTTTGGTCAGTTCCAATAGCTCTCGCTACTTCTTCAACATCTGCTCCTGTAGCTTCACACAGAGCACTGATTGAGTTAATGCTGCTGATTCTTTGGGCAAGGAAAGCATTAGCTGCCTGAGAATTAAAAAAAAAAACAAAATAAAACCAAAACATAGTACAGAGTAGAGAGAGCT----TAGTTGTTCTGGAAACCAGG-----ATGCC----------CACAGATCAACAAGGAGCTAGATACTAGAGTAACTCCTCCTTCAATACTATGTAGCCCTATT----GAGACACTAAGTAG--TAGTAAGGAGCGTAGTAGTTCTCATTACCTGGCATTTATGTAATCATAACAACATAGTACTGAAGTTGCAGAGTTGGAAACATTTTATGAAGGCAGCTGCTCTACTGGCAGTTAACTCCTATTAATTAATTACAGGAATAAAAGTAAGGCAAGGAGCTGATAT-----CATCTATTAGCTCAACTG----GATCACTGGAAAAGATGAATATCCTTTGACATAAACTGGGTCCTCCAAATTCCAGATGTCTTTCCCGTCTGCACCACCCACTCTCCCTAAGAGTCTGCCTAAGAGCTTCTTC--TCTTG-----------TATCCTTCACTGACTGCAGTAACAG--GAATGAGTAACACTAACCAGTTTAGAGAGTTCTGACGACCAGGTATTGGTTGTGAGGATTTTTTCTTTAGGCACCCAGTGCTCATAAACAGCACAAAGAGCACGGACAGCTTTCTGTCCCTCTGGAGAATCATCACCACCAATGAGCACCCTGTCTGGGTTTTTCAAGTCCTTGATTGCTGTTCCTTCTGCAAGGAACTCTGGGTTAGACAGCACCTGTAGGCACAG----AGATAAAGTGTGAA---ATAACAAACAACAGGCAA----AAAAAAATAAAATCTG----AAAACAACCTGCTCAGAAATCCACATCTGATATCACACTTACCTGCAAATCCAAGTTGGGCTTAGTATTAGCATCAAATATCCGACGAATGCTCTCTGCAGCACGTACTGGAACTGTGCTTTTCTCAGTGACAATTTTATAGCCATTTGAGTTTTGTACAATTCGTCTAGCACAAGCTTCAATGTATTTCAGATCAGCTGCTCTCCCTTTTCCCATCCCATAGGTCTTTGTGGGAGTGTTAACCTAGT ...x.xx...xx.:.:...............:........:...........:.....x:.......x...x.:.....:.....x.....x........x.................x..x..............x.....:........:........x.......------............---------------......x:x......:::x:....----:..:x:..:.:x.x.:.x:.-----..x:.----------.:..:..:.x::...:---.....:xx:..--------------.....:xxx...:.x...----......x.:::.:.--...x....::x--.:.:x..:xx....xxx:.x.:xx...--..:.x:.x..----------.:.x.:x....--.....x.x.x-..:..::.x:-----------------..:.x.....xxxx:...x...:.x.--------xx:x..:.x..xx...-----...x...x.x...xx:..----:..:.:.xx.x..xx.....:.------:..x:..:xx.:..:..x...x:x:.------------------...x.::...x::x:...:.:xx.::..:x.x:x..:x..--x....-----------...::xx.x:.:.:.xx.xx..x..--.....xxxx.:............:..:..:.....x.....:.....:..x........:......:.:..x..............x........x..:..x:.x......:....x..........xx.....x..x.....x..:..:...........:..:.:.........x........:.....x..:.....x.....:..........:x.:x.x..:----.::x.....x.x..---.x..:x..:x.::.....----..x.x.x:.:x..:.:----.:..:....x.x.:xx..xx.:x...:.xx...-------.....:....:.........:..x..:..x...........x.....:..:..:.....x..x..:.......................x........:..x..............:.....x....................:..:........x.....:.xx.....:.....:........:.....x.....:..x....::. 168M6I12M15I24M4D20M5D5M10D16M3I11M14I18M4D14M2D11M2I27M2I10M10I11M2I10M1I10M17I26M8I16M5D18M4D22M6I26M18I40M2D5M11D25M2D227M4D14M3D18M4D16M4D33M7I208M 766/1061 72.2% 1172/94230402 0.0% 175/1061 16.5% 16497535 NA +10127 chr4 + 190214555 39514060 39514059 39514207 148 ACACAACAAAGGAAA-----ATACTTACAGAAATAAATACAAGATCAGCTTCTTTGATGGCATCATCAATATTGGTAGAAAAAAAAAGATTTTTTCCTCGACAGGATTCTACCACTTCTTTTAGTCCTGGCTAAAAAGAAAAAAGAAAAGGAA chr4 - 94230402 23017544 23017543 23017696 71212707 71212706 71212859 153 ACACAGCAAGAAGAATAAACAAACTCACAGAGATAAATACAAGATCAGCTTCTCTGATGGCATCATCAATACTGGTGGAAAAGAAGAGATTTCTTCCTCGACAGGACTCCACCACTTCTTTTAACCCTGGCTGGaaaaaaaaaaaaaagaaaa .....:...::::..-----.x...:.....:.....................:.................:....:.....:..:......:.............:..:.............::.......::...:......:...:::.. 15M5I133M 123/148 83.1% 153/94230402 0.0% 5/148 3.4% 16496516 NA +10371 chr4 + 190214555 39514060 39514059 39514207 148 ACACAACAAAGGAAA-----ATACTTACAGAAATAAATACAAGATCAGCTTCTTTGATGGCATCATCAATATTGGTAGAAAAAAAAAGATTTTTTCCTCGACAGGATTCTACCACTTCTTTTAGTCCTGGCTAAAAAGAAAAAAGAAAAGGAA chr4 - 94230402 23014667 23014666 23014819 71215584 71215583 71215736 153 ACACAGCAAAAAGAATAAACAAACTCACAGAGATAAATACAAGATCAGCTTCTCTGATGGCATCATCAATACTGGTGGAAAAGAAGAGATTTCTTCCTCGACAGGACTCCACCACTTCTTTTAACCCTGGCTGaaaaaaaaaaaaagaaaaaa .....:....:::..-----.x...:.....:.....................:.................:....:.....:..:......:.............:..:.............::.......:....:......:.:..::.. 15M5I133M 125/148 84.5% 153/94230402 0.0% 5/148 3.4% 16499393 NA +11543 chr4 + 190214555 39521341 39521340 39521528 188 ATATGTTTACCTCATAAATAGGAAGTGTAGGAGAATTCCACGCATTGATTCTTGATTCATTGACATCAACAACCGTTACCCTGATTTCAGGACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTGCACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTACTAGAAGGA chr4 - 94230402 23019559 23019558 23019746 71210657 71210656 71210844 188 ACAAGTTTACCTCGTAGATGGGGAGCGTGTCTGAATTCCAGGCATTGATTCTAGCCTCATTGACATCTACAACAGTGACTTGGATTTTAGGACACATCTGTGCAATAACACTGCAGGTGGGCCCGCCGACATAGCCAGCACCGATACAGCAGATCTTCTTAATCTCAAACATGATTGCTCTAAAAAGA .:.x.........:..:..:..:..:..:xxx........x...........x.x:...........x.....x..x..::x.....:.........x..x.....:.....:..x.....:..x..:........x........:..:..............:.............:x...:..:.. 188M 150/188 79.8% 188/94230402 0.0% 0/188 0.0% 16501782 NA +11543 chr4 + 190214555 39521341 39521340 39521528 188 ATATGTTTACCTCATAAATAGGAAGTGTAGGAGAATTCCACGCATTGATTCTTGATTCATTGACATCAACAACCGTTACCCTGATTTCAGGACACATATGAGCAATGACACTACATGTGGGTCCTCCAACATAGCCTGCACCGATGCAACAGATCTTCTTAATTTCAAACATGATTGTACTAGAAGGA chr4 - 94230402 23016676 23016675 23016863 71213540 71213539 71213727 188 ACAAGTTTACCTCGTAGATGGGGAGCGTGTCTGAATTCCAGGCATTGATTCTAGCCTCATTGACATCTACAACAGTGACTTGGATTTTAGGACACATCTGTGCAATAACACTGCAGGTGGGCCCGCCGACATAGCCAGCACCGATACAGCAGATCTTCTTAATCTCAAACATGATTGCTCTAAAAAGA .:.x.........:..:..:..:..:..:xxx........x...........x.x:...........x.....x..x..::x.....:.........x..x.....:.....:..x.....:..x..:........x........:..:..............:.............:x...:..:.. 188M 150/188 79.8% 188/94230402 0.0% 0/188 0.0% 16504665 NA +12687 chr4 + 190214555 39547274 39547273 39547651 378 AAAGCCAAACAGAA-AACACAAAGTGTTACTAACGTTTTCTATTTATTC------ATTAATAAAAAGTGCATAGTACAAGCCCTTTATCCCAATCCAAGTACTCAGAAAAAGATTAACAACAGACCCTGGATGGCACAGAC-ATAATTTGTTTGGCGTGATTTAAACATATAAAATCAGTAATTAACATTTAGCATATCACACGACCACTTTTGCTTTT---------AACA----------AACTAATCTTCACACATGGTAACAAATACCTATGATTTTTCATTTAGAAATATTA---------TAAGAAGA--CTAAACTTACTATTGCAACAACAAAAATTTAACCCA---TTAAACTAGAAACTCT-CTTCATTTTTCCTTCTTCAAATTACTG----TTTTGTGTCTTA--AACTGAGTT chr4 - 94230402 23029824 23029823 23030243 71200160 71200159 71200579 420 AAAGTCTAACAGACCAAGACAAAAGGTTACTAATGATTGCTATTTATTTTGTTAAGTCAATAAAAAGTGCATAGTACAAGCCCTTTATCCCAATCCAAGTACTCAGTAAAAGATTACTAGGAAACCGCAAATGGCACAGATGATTTTTTGTTTGGCATAATTCAGACATTTTAAACCACCAATTTACATTAGATACATCACATCATCACTCTTCCTTTTTCAATAATGAACATTACAAGGTTAAGTGATCTGCAGACAATAC-ATGAATACATACAAGTTCTCATTTGAGAGTATAATAATTGTGTTAAGCAGACTCTAAAAATACTATTGATTTAACAAAGTTCTAAGCGAAGGTATAATTGTAAACTTTCCTCCACATTTCC-----CAAGTTGCTACAACTTGTGTCTCTTACTAACTGAGCT ....:.x......x-..x.....:x........:.x..x.........:------:.:................................................x.........x:.:x.:...x:::..........:-..xx..........:.:...:.:....x.x...:..x:....x.....x:::.:......:x.:....:..x.....---------....----------..x.:....x..x...xx::-.::.....x..::.x..:......:::.:...x.---------....x...--.....xx........xxx:......:x.:...x.x.---.xx..:.:x.....:.-..:..:x.....-----...:..:..:----..x...x.....--.......:. 14M1I34M6I86M1I77M9I4M10I20M1D34M9I8M2I36M3I16M1I12M5D10M4I12M2I9M 280/372 75.3% 420/94230402 0.0% 54/372 14.5% 16517450 NA +8705 chr4 + 190214555 39556421 39556420 39556586 166 CACTTACATTATGAGGACTGGTTGGCTTTCCAGGTAGGCTGGATCCTCTTAGATTAGGAGGTCTCAGTAAGAACAAGATCAATGCAATAACCATCCAGGCTACCAAGATCATTGTAACACTGATGCCATTATCACCAGAG------GGTCCCGGTACTAAAGACAAACAAAA chr4 - 94230402 23033536 23033535 23033707 71196696 71196695 71196867 172 CACTTACATTATGTGGGCTGGTGGGTTTTCCGGCTGCGCTGGAATTTCTCAGATTACTAGGTCTCAGTAAGAACAAGACGAATGCAATCACAACCCAGGCCATCACTACCATGGCAAAGCTGACGACGTTGTCACCGGAGTAATTTGGTCCTGGCACTACATACAAGGAAAA .............x..:.....x..:.....:.x.:x......x::...:......xx....................:x........x..x.:......:.:..xx.:...x.:..x:....:.x.:..:.....:...------.....:..:....x.x....:x.... 140M6I26M 127/166 76.5% 172/94230402 0.0% 6/166 3.6% 16522885 NA +3004 chr4 + 190214555 39560649 39560648 39560697 49 AAAACAAAACAAAATGCAGAAATCCCACCTTCCACTTAACATATTCAGT chr4 - 94230402 14932751 14932750 14932799 79297604 79297603 79297652 49 AAAACAAAAGAACTTGCAGAAGTCTCACCTTCCACTTGACAGGCTTAGT .........x..xx.......:..:............:...x::.:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 24627898 NA +3911 chr4 + 190214555 39563136 39563135 39563207 72 CTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:...........x...x..x.x........::...........:.:....x.... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 21366010 NA +3392 chr4 + 190214555 39567904 39567903 39567969 66 CAAAACAAAACAAAAAACAAACAAAAACACCCCAAACCATATTCAGTGCCAAATGTTAAAGCCCAA chr4 - 94230402 80985542 80985541 80985598 13244805 13244804 13244861 57 CAAAACAAAACAAAAAACACACAAAAAAACCCACAACCATTTCCAGTGT---------AAGCCCAA ...................x.......x....xx......x.:.....:---------........ 49M9D8M 50/57 87.7% 57/94230402 0.0% 9/57 15.8% -41417638 -52812764 +5417 chr4 + 190214555 39572387 39572386 39572506 120 TCCTTCCTCCTG-TCTCAGTGGT-ACTTACATTCCTGAAGACACTCTGTGTCTGTGCAGTAGGACTGGGACTGCCGTAACTACAAT-GAATAAGAAAG----GGAAGTTAGTGATTAGACTTAAACA chr4 - 94230402 23040694 23040693 23040820 71189583 71189582 71189709 127 TCCACGCTCCTGATCTCAGCAGTTACTCACATTCCTGAAGGCATTCTGTGTCTGTGCAGTACGACTGTGATTGTCTCAGCTAGAACAGAAAAAGAAAGGCGTGACAGTTAGCAATGAGACTTGGTCA ...x:x......-......::..-...:............:..:.................x.....x..:..:.x:.:...x..:-...x.......----.:x......::..x......::x.. 12M1I10M1I62M1I11M4I25M 94/120 78.3% 127/94230402 0.0% 7/120 5.8% 16531693 NA +3178 chr4 + 190214555 39576625 39576624 39576714 90 ATGTATATAAC---TTATACCTATGTGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681911 56681910 56682003 37548400 37548399 37548492 93 ATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ..:....:..:---..x:..x...:xx.x.x::...:.x:.:....x:.:...:....:..x:.......x...x...x....x......... 11M3I79M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% -17105286 -77125116 +3759 chr4 + 190214555 39576645 39576644 39576728 84 TGTGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTTTTTTGAGA chr4 - 94230402 15882773 15882772 15882861 78347542 78347541 78347630 89 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTGTTAAAA ..x........:.............:..xx.:.:.xx:.x.....:..x...x....x..x.....-----......:....x..:.:. 66M5I18M 64/84 76.2% 89/94230402 0.0% 5/84 6.0% 23693872 NA +3240 chr4 + 190214555 39576646 39576645 39576728 83 GTGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTTTTTTTTGAGA chr4 - 94230402 15882776 15882775 15882863 78347540 78347539 78347627 88 GTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTGTTAAAAGA ..........:...:.......:..xx.:.:.xx:.x.x...:..x...x....x..x.....-----......:....x..xx:... 63M5I20M 61/83 73.5% 88/94230402 0.0% 5/83 6.0% 23693870 NA +3753 chr4 + 190214555 39576647 39576646 39576725 79 TGTGTGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT----TTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882855 78347548 78347547 78347630 83 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTG ..x......:.....:.........:..xx.:.:.xx:.......:..x...x....x..x.....:----......:..... 67M4I12M 61/79 77.2% 83/94230402 0.0% 4/79 5.1% 23693874 NA +3158 chr4 + 190214555 39576651 39576650 39576706 56 TGTGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::...x.:...:...:..:.:..........x....:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -53158697 -41071705 +3494 chr4 + 190214555 39576653 39576652 39576708 56 TGTATGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:..:.x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -53158695 -41071707 +3077 chr4 + 190214555 39576657 39576656 39576712 56 TGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::...x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -53158691 -41071711 +3008 chr4 + 190214555 39576659 39576658 39576720 62 TGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 45067210 45067209 45067271 49163132 49163131 49163193 62 TGAATTTATTTGGATATATACGTGTGTTTGTTGGTTTGTTCTTTTTTTTTTTTTTTCTTTCT ..x..x...x.:x.......::.:.:...x..xx...x..:...............:...:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -5490551 -88739851 +3040 chr4 + 190214555 39576659 39576658 39576710 52 TGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .:.x.....:...:..:.:........x......:.x.........:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -53158693 -41071709 +3293 chr4 + 190214555 39576680 39576679 39576745 66 ATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTT chr4 - 94230402 76182406 76182405 76182471 18047932 18047931 18047997 66 ATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ....::.......x.:x.:..:xx........x............:...x::..xx...:...... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -36605726 -57624676 +3005 chr4 + 190214555 39579391 39579390 39579443 53 CACAGTGAGACAGTGCCTCCAAAAAAAAAAAAAAAGAAAAAAAAGAAAAGAAA chr4 - 94230402 25248337 25248336 25248389 68982014 68982013 68982066 53 CACAAGAAAACAGTCTTTCCCAACAGAAAAAAAAGGAAAAAAAAGAATAGAAA ....:x:.:.....x::...x..x.:........:............x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 14331054 NA +3010 chr4 + 190214555 39581492 39581491 39581540 49 TTTTTCGTTTTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 2951018 2951017 2951066 91279337 91279336 91279385 49 TTTTTCAATTCTTTCAATTTCTTTGTCTTTTTTTTTTTTTTTCATACAG ......:x..:....xx.......x.................x.x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 36630474 NA +3470 chr4 + 190214555 39589175 39589174 39589233 59 CTCCTGGGCTCAAGCAATTTTCCTGCCTCAGCCTCTCAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:.....::x..:x.xx.x........:..............:....x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 21392036 NA +3438 chr4 + 190214555 39591631 39591630 39591709 79 CTGCAACCTCCACCTCCCAGACTCAAGTGATTCTCATGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.::.::.......x...x..x.x........::...........:.:....--.::x...... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 21394505 NA +7739 chr4 + 190214555 39605066 39605065 39605196 131 CTCACCAGATTGATCAGTCTTCTCATTGCATGTTCATGAGAGCAAACACATTCACAGGGATCAAATCCACCTTCTGCCATGATTACCCAGCTTGATTTT-ACTTGACTGTTTAAATCTAGGAGGAAGGAAAA chr4 - 94230402 23057988 23057987 23058119 71172284 71172283 71172415 132 CTTACCAGATTAATCAGTCTTCTCATTGCATGTTCATGTGAGCAAATGCATTCACAAGGATCAAATCCACCTTCTGCCATGGTTCCCTGGATAAACCTGAACTTTTCTGTGAACACCTAAGAAGAATAAAAA ..:........:..........................x.......::........:........................:..x..::.x.x:.::.x-....xx....xx.x.:...:..:...x:.... 99M1I32M 105/131 80.2% 132/94230402 0.0% 1/131 0.8% 16547078 NA +3633 chr4 + 190214555 39610066 39610065 39610139 74 CTGCAGCCTCAACCTCCCAGGCTCAAGTGATCCTTCCCTCTCAGCCTTCCAAGTAGCTGGGACCACAGGTACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..x..:.::..:.......x.:.x:xxxx.........:...........:..:...x..:... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 21412940 NA +3330 chr4 + 190214555 39644629 39644628 39644740 112 TTGCAGA-TGGATAAATGCTAAAG---AAGGCAAGTGAAAATCGG---TAATGAGATACATCTTCATTTTATCATGTTTTGGATTTTTTTTGTTTTGGTTTGGTTTTTTTATTTTTTTT chr4 - 94230402 76372460 76372459 76372576 17857827 17857826 17857943 117 TTGAAGACTGGGGAAATCTAAAAGGCCAAAATAAATGAACTTAGGACATAATGAAATGC--TTTGAGCTTGGAAAACATGGGGTTTTTTTTGTTTTGGTTTGGTTTTTTTGGTTTTTTT ...x...-...:x....x:x....---..:::..:....xx.x..---......:..:.--:..x.x:..:xx.x::x.x..:...........................:x....... 7M1I16M3I18M3I11M2D58M 80/110 72.7% 117/94230402 0.0% 9/110 8.2% -36727831 -57502571 +3848 chr4 + 190214555 39648422 39648421 39648504 83 CTATAACCTTGAACTCCTGGGCTCAAATGATCCTCCTGCCTCAGCTTTCCAAGTAGCTAGGACTACAGGCATGTGCCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ...:.:..:x:.:..:.....:....:..x.:.x.xx.x......:..:.........:.:......--.:..::.....:.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 21451296 NA +3719 chr4 + 190214555 39654442 39654441 39654520 79 CTGCAACCTCTGCCTCCTGGATTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:....:......:.x...x.xx.x........::.............:....x...--...... 71M2D6M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 21457316 NA +3188 chr4 + 190214555 39661316 39661315 39661364 49 CAGTCTGTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 22454290 22454289 22454338 71776065 71776064 71776113 49 CAGTCTGATTTTTTTTGTTGTTTGTTTGGTTGGTTGTTTTTCTGTTGTT .......x...........x........x...x......x.:....x.. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 17207026 NA +3106 chr4 + 190214555 39661320 39661319 39661362 43 CTGTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTT chr4 - 94230402 71609802 71609801 71609844 22620559 22620558 22620601 43 CTGTTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTT .........x......:..................x..:x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -31948482 -62281920 +3073 chr4 + 190214555 39669057 39669056 39669133 77 GGCTTGATGGATGAACGGCTGAATGACAGAATGCACATTTCAGGAGATCTAAAAAGGCTGAGCCAAGAAGGAATTTA chr4 - 94230402 49262372 49262371 49262448 44967955 44967954 44968031 77 GACTTAGTGACTGAGCTGCTGAAGGACAGAAGAAGCACTGGAGGATAACTAAGAAAACTAAGAAAAAAAGGAACTCA .:...::..:x...:.x......x.......x:x:..:.xx....x.x....:..::..:..xx..:......:.:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -9593315 -84637087 +3064 chr4 + 190214555 39669932 39669931 39670005 74 CTGCAACCTCCACCTCCCAGGTTCAAGCGATCCTCCTGCCTCAGCCCCTCTAGTAGCTGGGATTACAGGCACGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::........:.x.:.x.xx.x.......::..x.........:.:....x.::.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 21472806 NA +3131 chr4 + 190214555 39680314 39680313 39680408 95 CTAAAGCAGTGGTGTCCAACCTTTTGGCTTTCCTGGGCCACATTGGAAGAAAAAGAATTGTCTTGGGC----CACACATAAAATACAATAACACTAATG chr4 - 94230402 46972094 46972093 46972192 47258211 47258210 47258309 99 CTACTACAGAGGTCTCCAACCCTTGGGCTTACCTGGGCTACGTGGACTGGAGAGGAACTGCATTGGGCTGTGTACGTgtaggtcactgtgaaagtaatg ...xx:...x...x.......:..x.....x.......:..:.x.:xx.:.:.:...:..:x......----:..:::..::x:..x:.:.x.x..... 68M4I27M 62/95 65.3% 99/94230402 0.0% 4/95 4.2% -7291780 -86938622 +3685 chr4 + 190214555 39680733 39680732 39680867 135 AAAAAAAAAAAAAAGAATTGCATAAAAATATCATAGTATTTTTAAGAAAGTTTACAAATTTGTGTTGGGCCACATTCAAAGCTGTCCTGGCCTGCATGTGGCCTGTGGGCTATGGGTTGGACAAGCTTGATCTAA chr4 - 94230402 37056335 37056334 37056454 57173949 57173948 57174068 120 AAAAATATAACTAAAATTCACATAATAGTATTAAAATTTCTTGAACA---------------TATGGGTCCATATTGCTAGCTATCCCAAGCTGCATGTAGTCTGTGGACCATGGGTTGGACTTGTCCAATTCAA .....x.x..xx..:.x.::.....x.:...:.x.:.x.:..x..x.---------------.:.x..x...:...xxx....:...:::x........:.:......:.:...........xx.::::..::.. 47M15D73M 79/120 65.8% 120/94230402 0.0% 15/120 12.5% 2624398 NA +3005 chr4 + 190214555 39695233 39695232 39695311 79 GGGCAGTATAGCGAGACCCCGTTCTCCACAGAAAGGGGGGAAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAGAAAGA chr4 - 94230402 21194175 21194174 21194253 73036150 73036149 73036228 79 GGGGAGCTTACCAGGACCCTGTCTTGAGCACAACAAAAGTGGAAAAGCCAGAAGAAAAAAAAAAAAAGAGAAACAAAAA ...x..:x..x.::.....:..::.xx:..x..x::::.x::.....x..:..:.............:.:...x...:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 18501058 NA +3726 chr4 + 190214555 39695262 39695261 39695332 71 AGAAAGGGGGGAAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAT-TACCAGACCTTTTTTTGG chr4 - 94230402 89604132 89604131 89604203 4626200 4626199 4626271 72 AGCAAGGGGGGAAAAAAGGCAAGAAAGAAAGAAAAAAAAAATAAGAACTAACCAGACTACACTTTTTCTTGG ..x...............:...:...:...:..........x.....xx..x:-x..:.x..:....:.... 53M1I18M 56/71 78.9% 72/94230402 0.0% 1/71 1.4% -49908870 -44321532 +3139 chr4 + 190214555 39697451 39697450 39697490 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 20715136 NA +3102 chr4 + 190214555 39697453 39697452 39697488 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -41931611 -52298791 +3353 chr4 + 190214555 39697453 39697452 39697492 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 20715138 NA +3567 chr4 + 190214555 39697455 39697454 39697494 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 20715140 NA +3102 chr4 + 190214555 39697457 39697456 39697492 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -41931607 -52298795 +3410 chr4 + 190214555 39697457 39697456 39697503 47 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGT chr4 - 94230402 18982315 18982314 18982361 75248042 75248041 75248088 47 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ................x...................::..::x..:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 20715142 NA +3139 chr4 + 190214555 39697459 39697458 39697498 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 20715144 NA +6840 chr4 + 190214555 39698183 39698182 39698408 226 GCGGCGGCCGGGGTGGTAGTGGCAGTGTT-CGTGTGCTCAGGTCTGAATCGCCGA-----GGGAGGAGGCGGTGG--AGGAAGAGGTGGCGGCGGTGGCGGTGGTCGTAG----CGGT--GGCGGAGGAGGCGGGTACGAATCAGCTGCGGGCGGAGACATGGCCAACATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGAGGTGCTGAAGAGCGAGGAGGTCAGAAATGAACTCCCG chr4 - 94230402 23088594 23088593 23088821 71141582 71141581 71141809 228 gcggcggccgcggAGCCGGCAGCCGTACCGCGCATGCTCGGC----AGCCGCCGCCATTTTGGTGGGGCCGGGAGTTATCCAGCGGGAGCGGCGGCGGCGGAGCTCGCTGGGTCCGGCTCGGAGGTGGGGGCGAGTGCGCGCTCGCTGCGG------ATATGGCCAACCTCGCGGTGCAGAGGATCAAGCGTGAGTTTATGTATGTGCTGAAGAGCGAGGAGGCCAGAGCCG--CTcccg ..........x..x.x::.::..x..:::-..::.....:.x----.::.....x-----x..x..:.x...x:.--.xxx..x..x:.......:.....x.x...:x.----...:--..x..x..:....:..:..x:::x.......------.:.........x...........x.:........x.....:.x.x.x...................:....:x:.--...... 29M1I12M4D9M5I15M2I33M4I4M2I31M6D75M2D6M 155/214 72.4% 228/94230402 0.0% 26/214 12.1% 16609589 NA +3078 chr4 + 190214555 39705163 39705162 39705212 50 TGGGATTGCAGGCATGAGCCACTGCACCTGGGTTTTTTTTTTTTTTTTTT chr4 - 94230402 25092818 25092817 25092867 69137536 69137535 69137585 50 TGGGGATTCAGGCATGACTCACTGCACATGGGTTGTTGTTTTTTTTTCTT ....:x.x.........x:........x......x..x.........:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 14612345 NA +3689 chr4 + 190214555 39706982 39706981 39707060 79 CTGCAGCCTCCGCCTCCTGGCTTCAAGTGATTCTCAGGCCTCAGCCTCCAGAATGGCTGGAATTACAGGCATGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:xx:x..:....x........x...x....x........::x:.:.:.......:....--.:...:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 21509856 NA +3433 chr4 + 190214555 39708911 39708910 39708982 72 TTATTTGTGTCTTTTTTTTTTTTTTTCCTCTTAGTATGAGAACTTGAACTTG-CCAAGGAGGTAGAGATTTTT chr4 - 94230402 82045815 82045814 82045887 12184516 12184515 12184588 73 TTGTTTTTGTTTTGTTTTTTTTTTTTCCTCTTCAAATGAGAACTTGAGGTCATTCGATGAGACAGAAATGTTT ..:...x...:..x..................x:x............:x.::-:.:.x...::...:..x... 52M1I20M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% -42336904 -51893498 +3137 chr4 + 190214555 39714497 39714496 39714567 71 TCCTTGTCTTTTAGAAGTTTCATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTAA chr4 - 94230402 8681920 8681919 8681985 85548418 85548417 85548483 66 TCCATGTCTGATATAA-----ATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA ...x.....xx..x..-----..........:...::.:.:.:...:.....xx.:.............:. 16M5D50M 51/66 77.3% 66/94230402 0.0% 5/66 7.6% 31032577 NA +3001 chr4 + 190214555 39714514 39714513 39714565 52 TTTCATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 92735345 92735344 92735396 1495007 1495006 1495058 52 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTT .:.:::....x.....:...:..:.:..........x....:.x........ 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -53020831 -41209571 +10670 chr4 + 190214555 39737394 39737393 39737533 140 ACATTTATTTTCTGTTTATTTTTAAGACGAGCAAAAATCAAATTAAAGTAGATCTTGTAGATGAGAATTTTACAGAATTAAGAGGAGAAATAGCAGGACCTCCAGACACACCATATGAAGGCAAGT-ACTTTTTTCTGTAT chr4 - 94230402 23122412 23122411 23122552 71107851 71107850 71107991 141 ACTCTTTTTCTCTGTTTGTTTTTAAGACCAGCAAAAATCAAATTAAAGTAGATCTTGTAGATGAGAATTTTACAGAATTAAGAGGAGAAATAGCAGGACCTCCGGATACACCGTATGAAGGCAAGTAAAGTTTTTATGTAT ..x:..x..:.......:..........x..........................................................................:..:.....:.............-.xx.....x..... 126M1I14M 128/140 91.4% 141/94230402 0.0% 1/140 0.7% 16614982 NA +3394 chr4 + 190214555 39738753 39738752 39738833 81 CTGCATCCTCCATCTCCCAGAATCAAGTGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTACAGGCGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:..x..:xx.x..:.::.:x.......x...x.xx.x..:.....::::.........:.:....x.:.......::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 21541627 NA +5283 chr4 + 190214555 39745730 39745729 39745813 84 TTTGTTTTCCCCATTTTTTTAGGAGGAAGATACCAACTAGAGATAAAAATACCAGAAACATACCCATTTAATCCCCCTAAGGTA chr4 - 94230402 23127352 23127351 23127433 71102970 71102969 71103051 82 TTTGTTTTTGT--TTTCTGAAGGTGGAAGATATCAGCTAGAGATAAAAATTCCAGAAACATATCCATTTAATCCTCCTAAGGTA ........:x:--...:.xx...x........:..:..............x...........:...........:......... 11M2D71M 70/82 85.4% 82/94230402 0.0% 2/82 2.4% 16618378 NA +5283 chr4 + 190214555 39745730 39745729 39745813 84 TTTGTTTTCCCCATTTTTTTAGGAGGAAGATACCAACTAGAGATAAAAATACCAGAAACATACCCATTTAATCCCCCTAAGGTA chr4 - 94230402 23112852 23112851 23112933 71117470 71117469 71117551 82 TTTGTTTTTGT--TTTCTGAAGGTGGAAGATATCAGCTAGAGATAAAAATTCCAGAAACATATCCATTTAATCCTCCTAAGGTA ........:x:--...:.xx...x........:..:..............x...........:...........:......... 11M2D71M 70/82 85.4% 82/94230402 0.0% 2/82 2.4% 16632878 NA +3029 chr4 + 190214555 39747568 39747567 39747635 68 ATATTTTGTTTTCTTATTCAGCTGTTAATGGATATTTGGATTTTGTTTGTTTGTTTTTTGTTTTTTTG chr4 - 94230402 71439618 71439617 71439685 22790718 22790717 22790785 68 ACATTTTCTTATCTATTTCAGGCTTTTGTTCTTTTGTGGGTTTTTTTTGTTTGTTTTTTGTTTTTTTG .:.....x..x...xx.....x:x..x:.xxx.x.x...:....x....................... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% -31692050 -62538352 +7768 chr4 + 190214555 39755646 39755645 39755745 100 TTATATTCTAGGTCCGGTTTATCACTAAAATATGGCATCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATATCCTGAAAGATCAATGGTAAGA chr4 - 94230402 23129914 23129913 23130013 71100390 71100389 71100489 100 TTGTGTTTTAGGTGCGGTTTATCACCAAAATATGGCATCCTAATATTAGCTCAGTTACTGGGGCCATTTGTTTGGATATTCTGAAAGATCAATGGTAAGA ..:.:..:.....x...........:.......................:..x..:..x.....:..............:.................... 100M 89/100 89.0% 100/94230402 0.0% 0/100 0.0% 16625732 NA +3025 chr4 + 190214555 39765899 39765898 39765966 68 GGATATATATATACATACATACATACATACATACATACATACACACACACACATACACATACACATAC chr4 - 94230402 14964817 14964816 14964884 79265519 79265518 79265586 68 GGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.:.x....::x.:.:.::::...::::..::..:.....xx.........:....:.....:.. 68M 44/68 64.7% 68/94230402 0.0% 0/68 0.0% 24801082 NA +3073 chr4 + 190214555 39765903 39765902 39765970 68 ATATATATACATACATACATACATACATACATACATACACACACACACATACACATACACATACACAA chr4 - 94230402 8395808 8395807 8395875 85834528 85834527 85834595 68 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA .:..:...x:.:.:..::..:.x.....xx.....:.............x.....x.::x...x.x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 31370095 NA +3306 chr4 + 190214555 39765903 39765902 39765979 77 ATATATATACATACATACATACATACATACATACATACACACACACACATACACATACACAT--ACACAAAAGCCAAAC chr4 - 94230402 8395804 8395803 8395882 85834521 85834520 85834599 79 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAAC ...x.:..::..x:.:.:..::..:.x.....xx...............:...x.:...x..--.:.x....x...... 62M2I15M 56/77 72.7% 79/94230402 0.0% 2/77 2.6% 31370099 NA +3052 chr4 + 190214555 39767291 39767290 39767360 70 TTTTTTCTGTTTTTTTTTTTGTGTGTGTGTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAGTCTGG chr4 - 94230402 46886519 46886518 46886588 47343815 47343814 47343884 70 TTTTTTTGGTGGTTTTTTTTGTTTGTTTGTTGTGTGTGTGTGTGTGCTTTGTTTTTAAGATATACTTTAG ......:x..xx..........x...x....x...x...x...x..:..xx.....:....:x.x.:.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% -7119228 -87111174 +3087 chr4 + 190214555 39767293 39767292 39767349 57 TTTTCTGTTTTTTTTTTTGTGTGTGTGTTTTGTTTGTTTGTTTGTTTGTTTTTTGAG chr4 - 94230402 31390432 31390431 31390488 62839915 62839914 62839971 57 TTTTCTTTGGTATTTTGTATTTGTTTGTTTTGGTGGTTTTTTTGTTTGTTTTTTGAG ......x.xx.x....x.:.x...x.......x.x....x................. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 8376861 NA +7752 chr4 + 190214555 39774812 39774811 39774939 128 ATTTTCATGTTTTGCATTTTAGGGCAGCTGCAATGACTCTCCGCACGGTATTATTGTCATTGCAAGCACTATTGGCAGCTGCAGAGCCAGATGATCCACAGGATGCTGTAGTAGCAAATCAGGTAAGA chr4 - 94230402 23144387 23144386 23144513 71085890 71085889 71086016 127 ACTTTCAAACTTTA-ATTTCAGGGCAGCAGCAATGACTCTAAGAACAGTGTTGTTATCTCTGCAAGCATTGCTGGCAGCTGCAGAACCAGACGATCCACAAGACGCAGTAGTGGCAAACCAGGTAAGA .:.....x::...:-....:........x...........xx.x..:..:..:..:..x:........:.::.............:.....:........:..:..x.....:.....:......... 14M1D113M 101/127 79.5% 127/94230402 0.0% 1/127 0.8% 16630425 NA +7752 chr4 + 190214555 39774812 39774811 39774939 128 ATTTTCATGTTTTGCATTTTAGGGCAGCTGCAATGACTCTCCGCACGGTATTATTGTCATTGCAAGCACTATTGGCAGCTGCAGAGCCAGATGATCCACAGGATGCTGTAGTAGCAAATCAGGTAAGA chr4 - 94230402 23140950 23140949 23141076 71089327 71089326 71089453 127 ACTTTCAAACTTTA-ATTTCAGGGCAGCAGCAATGACTCTAAGAACAGTGTTGTTATCTCTGCAAGCATTGCTGGCAGCTGCAGAACCAGACGATCCACAAGACGCAGTAGTGGCAAACCAGGTAAGA .:.....x::...:-....:........x...........xx.x..:..:..:..:..x:........:.::.............:.....:........:..:..x.....:.....:......... 14M1D113M 101/127 79.5% 127/94230402 0.0% 1/127 0.8% 16633862 NA +57883 chr4 + 190214555 39777666 39777665 39779725 2060 TTTTCCCCCCATATAGTACAAACAAAATCCCGAAATGTTCAAACAGACAGCTCGACTTTGGGCACATGTGTATGCTGGAGCACCAGTTTCTAGTCCAGAATACACCAAAAAAATAGAAAACCTATGTGCTATGGGCTTTGATAGGGTAAG----TACATAAGGG-----------CATGTTGATTT-TGATATA-----TTGATTGATTTTAAATTATTGCAAATTCTTGGCTGACAAAAGTGGTTTAGAAAATAAGAGAAATTCGCAGCCTGGGCAACATGGCGAAACCCATCTCTACAAAAATTAGCTGGACATGGTAGTGAGTGCCTGTAATTCCAGCTACTCTGAAGGCTGAGGTGAGAGAATCCCTTGGGCCCA---GGAGGTC---GAGGCTGCAGTGAGCGATAGTCATGCCACTGCACTCCAGCCTTGGTGATAGAGCAAGACCCTGTCTCAAAA----AAAAAAAAAAAAAAAAAAAAAAGGAAAATAAGAGAAAATCTAGTTTTGGTAAACATATTTTCTGTTTTCAAAGTCAGTGATTTTTTTATTTTTACTAATTACT--GTCATTGATTTTAGAAGCTTTCCATGCACTGCAAATGTAAATCAACTTACAGAAAAGAAACAAGGTGTTAATTCCCAGTATAAAGAGTGAATGATTCAGTATTGTTTAAATGTTTCCTTGAGATTTAATTTCCTGTCCCCTTTTCTTCTCTACAGAATGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGAGACTGCAACAGAATTGCTTCTGAGTAACTGAGGCA--TAGAGAGCTGCTGATATAGTCAAGCTTGCCTCTTCTTGAGGAGCACCAACATCTGTTATTTTTAGGATTCTGCATAGATTTCTTTT--AAACTGGCATTCTTGCCTAATGATGTTATCTAGGCACCATTGGAGACTGAAAAAAAAAAATCCCTGCTCTGTAAATAAAGCTAATTAAACGTCTGTGTAAATTTAAAAAGGGGAAATACTTTAATTTTTTTT---CTTAATAGTGTAAAAATTCCCTGAGCTAAGCTAAAACCATGGAAG--AAACATG-CTACTTTAGTGTTTAGCAGTGT-ACCAAGACTAGCAAGAGTTTGCTTCAGGATTTTG-TTGAATAATTAAGATAATA----TTTTGAGTGTGTCAGGGCCATTCAAATTGTTGGTGTTG--CATCACAGCTACCTTAACTGTTTTTAACATGGATCCTCTGTGCCTGTGAATT------TACTTGCATGCTTGTACTT----GACTTCTTAGGATGGGTAGCTGAAAAGACCACCATTTTAAGCATTTGAGAATTCTTAAATAT--------------------GAAATTTATTCAGAATTGAAGATGGTGACCTATTCAGAGCCTTTTTGTCCTT-GTCAACAGACTGGGACAGTGTCTGATTCCCCCTTCACCCCCCCCACCCCCGCCTTGCCACACACAGCTAA----------------------TATTCTAATGGTAAATTTCTCTGTATCAGGTGGGGAAATGTG---------CTGAAGGACAGTATGTATCCCTTGCTTCAT------TTTTAG---GTCGTAGGTTTGGAATGTCTTGTCCCAGTTCTTCAAACACTCTTAAATTTTTCTTAA-GTAATGTAAAAATGGAACTG---------CCAATTTTATTTCTCTTGCA------------AAAATA-------GTAAATACTTGATGTTACATTATTCCCAGGTTTAATGAAAGAACCCAACTTAGTTTTTCAGTGAATTTGACACCTATTTTTTAGTGATGAAATTTTTCTTTGAGAACTGGCAAGGATGCAGTCAGCTGTTT-----GCAGTTTT-TAGCCTGATTTTGGGGTCTA---TAGAGATTGCTTTATTGGATACTTCAAG--TCATTCTTGCTTGCA--CTTCCCCTATTGACACATGAAAGCTGTGTTGGTG-TTTTATTGTACATACTTCAGATGCACATAGGAATAGAAGTGTGTTATAAATCTAGCTTTCTTT----ATGATGTTTCTGATAATACGAGAATTGAAAACTTTACCTTCTCTTGTACAT------AGTCAGACTATTTGTATTAAATTTACATTTCATTCTAAGTTCAAAAGTTTGAAAATTATTAGTTTTGCAAGATCACACACTAATGTAACCATTTTATGAAGGTTGAAGTGGATTTATG chr4 - 94230402 23150716 23150715 23152666 71077737 71077736 71079687 1951 TCTTTCTTTTGTATAGTACAAACAAAATCCAGAAATGTTTAAACAGACAGCTCGACTTTGGGCACATGTGTATGCTGGAGCACCAGTTTCTAGTCCAGAATACACCAGAAAAATAGAAAACCTTTGTGCTATGGGCTTTGATAGGGTAAGTATCTACATGAGGTCCCTTCTGCCCCAGGCTGTTTCATGATATGCAACTTTGAATGTTTTTCAGTTGGGGGAGG-----GGCAAGCATATATG-----------------------------TGGCAATATAGGGAG--CCATT----CAGATGTTAA-----------AATAAAACTCACTATTTCTGTTCAATTTGGAGGTTCAATCATACGG----TTTAGCTACAATTGGAGTTCTGAGATGCTTCATTATTGGTAAATCCTG--AGTTCCCCTCACCTTTTCTGA---AGTAA---TCTTTCTGAAAATGCTTAGTTAAGACTTGGGTGAAAAACGAATGTATGAA-----------CTGATAAA--------------------TCTGCGACCGTCTCATTTC-----ATTTCTCAGTCGCAGGCT------------CACGCACCGAAAACGT-------------------------------------------------------------TACTGTTTACCTGTTT-------------------------GTTTTCTCATTGCAGAATGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGAGACTGCAACAGAATTACTCCTGAGTAACTGAACCATGTAGAGAGCTGCTTCGGTTGTCCAGCTTGCCCCTTCTGGAGGAGCATCACCATCTGTTATTTTTAGGATTCTATATAGATTCTCTTTTAAAACTGGCACTCTTGCCTGATGATGCTATCTAGGCACTATTGGAGACTGAAAAA---------CCGCTCTGTAAATAAAGCTAATTAAACGTCTGTGTAAATTTAAAAAGGGGAAATACTTTAATTTTTTTCTTACTAAATATTGTAAAAATTCTTTGAGCTCAGCTAAAATAATGGGGGAAAAACATGCCTACTTTCGTGTTTAGCAGTGTGACGAAAACTAGCAGGAACTTTCTTCAGGATTTTGATTTAGTAATTCAGAAAGCCACATTTTTGAGTGT----TAGTCATCAAAATTGTTGGTGCGGCTCATCACAGCTATCTT-ACTGTTCTTAACATGGATCCTTTGTGCCTGTGGATTGACCTATATTTGCATGCTTGTACTTAATAGACGTATTAGGTAGGGTCGCTGAAGAGAGCACCA-TTTAAATACTCGAGTGTTCTTGTACCTATTTTCTTGAAAGGCTTAAAAAGACTTACCCAAAGTTCCAAATGGTGACCTATTCAGAACCTTTTTCTTCGTAGCTTATTAATTGGGAA---GCCGGATTCTCTTCTC----------------CCTTACGTCATACAGCTAAGAACCCTCCCTAGAATATTCTTCATTCTGTTGGTA-----TTGTGTGCCATGTATGGTAGTCTAGGCTCGCCTATGAAGAAC-------ATACTTTGAATTATCAATGATTTTCGTCCGTCGTATTTTCTACACACCTGGTAAGGGTTT--------------AGTATGCCTTGATATAGCACAAGAATGGAGCTGGttttcttttctttttttttcttttTGTCTTAAGTGGATGTAAAATGTTCTTCCGTATATCTTGGATAATATGACTTCACTGGATTTGAAGGAGGAA--GAAGCTAATTCTCTGGCATA-CTGAGAATTAT--------------ATTTTCTTTTGAGTACTTGATATGATGCAATCAGCTGTTTTTGCAGCAGTTTTCTAGCTTTATTTTGGGCTTCAGTTTAAGGATTGCTTT-CCAGGTACTTGAAAACTCATCCTTGCTCGCGTTTTTCTCTAGTTGACACATGGAGGCTGTGTTGGTGTTTTTACTGTACATACTTCAAATGCAC------ATAGAAGTTTGTTCTCAATTTAGCTTTCTTTTGGATTGATGTTTCTGATAA-ACGAGAACTGAAA--CTTACCTTTGCTTGTACATACAGTCAGTCATCTTACTCGTATTAAAATGACATTTCATCCTGAGTGCAAAGGCTTGAAAATTATTAGTTTTGCAACTTCAAACACTAGTACATCTATTTAAAGAGAACTGTAATGTCTTTATG .:..:.:::::...................x........:...................................................................:...............x..........................----.....:...x-----------..x.:..x..:-......:-----....x..x....x.:..:xx.x.::-----...x::..x.x:..-----------------------------x.....:..:.x..:--....:----..:.x:...:-----------.:.:.:xx:.xx..x...::x::.x.:..:...:.x.:x::x:x.:----:..:.x:x..---....x..---..x...x..x.:xxx.xx.:..x..--.x.x.x.::..x.:..xx...---..:..---:..x...x....----x.:xx..:.xxx:::x:.....x...x:..x..:-----------:..:....--------------------..x.:..::x.:.:....:-----...x..--...::x.::.------------..:....:.x...:..-------------------------------------------------------------..:......xx.....-------------------------x...::..x:.:..............................................................:..:............:x..--............xxx:.x...x........:.....x........:..x......................::.......:::...--.........:........:......:...........:................---------.:..................................................................:---..x....x...........::......x........:x....::.--.......-.......x..............-..x..:.......:..::..x.............-..x.:.....x...x.::x----..........----x:.:...:x............:x.--...........:...-......:..............:..........:...------..:................----...x.x.....xx....x......:...x.....-.....::.:.:...x:.....:x.:x.--------------------:.:.:...::..:.:..xx.:.................:.......x.:.x.-.::x.:x:.:.....x---.:.x.....:.:::..----------------....:.xx..:........----------------------:.....:x.....-----:.x...::..x..:x..x.:.x.:---------x.....:..-------..x.:...xx.:..------....x.---......xx..:x:x.:::..x..xxx:...:--------------.:.x.x:...:.-:..::::..:......:...---------:.xx....x..::.:...:x------------.....:-------...x..x:.x...:x..::x:x.:x.::.:...:.x.:.:...--x..x:..:..:.:::.::x.-:...x.x:...--------------.....::......x...x.xx.x......:..........-----........-....:.x........x.::.---..::.........-:::.:.....x..:--....:......:..:--:...:.:x:..........:.:............-.....:.............:......------........x....x.x...:...........----x...............-.......:.....--:.......:x.........------.....xx:..:.:........x.x.........:..:...x....:.:......................xx...x......:.::.x.:....x.x..::::..x.:..xx...... 150M4I10M11I11M1I7M5I25M5D14M29D15M2D5M4D10M11D46M4D10M3I7M3I25M2D21M3D5M3D12M4I34M11D8M20D19M5D6M2I10M12D16M61D16M25D94M2I86M2I54M9D69M3I45M2I7M1I22M1I34M1I19M4I10M4D24M2I15M1D36M6I19M4I34M1D27M20I52M1I16M3D16M16D19M22I13M5D24M9I9M7D14M6I6M3I31M14D12M1I20M9I20M12I6M7I43M2D20M1D11M14D40M5I8M1I20M3I13M1D14M2I15M2I34M1I26M6D31M4I16M1D13M2D19M6I118M 1353/1776 76.2% 1951/94230402 0.0% 459/1776 25.8% 16626950 NA +12847 chr4 + 190214555 39777666 39777665 39777821 156 TTTTCCCCCCATATAGTACAAACAAAATCCCGAAATGTTCAAACAGACAGCTCGACTTTGGGCACATGTGTATGCTGGAGCACCAGTTTCTAGTCCAGAATACACCAAAAAAATAGAAAACCTATGTGCTATGGGCTTTGATAGGGTAAGTACATA chr4 - 94230402 23147947 23147946 23148102 71082301 71082300 71082456 156 TCTTTCTTTTGTATAGTACAAACAAAATCCAGAAATGTTTAAACAGACAGCTCGACTTTGGGCACATGTGTATGCTGGAGCACCAGTTTCTAGTCCAGAATACACCAGAAAAATAGAAAACCTTTGTGCTATGGGCTTTGATAGGGTAAGTATCTA .:..:.:::::...................x........:...................................................................:...............x............................:x.. 156M 143/156 91.7% 156/94230402 0.0% 0/156 0.0% 16629719 NA +7572 chr4 + 190214555 39782610 39782609 39782813 204 CATTGAAGCAGGGTGGGCTG-TGGGGTGGAAGGTTGGGGTATTTGTCTTGAGAATTAAAAACTACG-AAACACTTTTGTACACAACTGATTTTTTAAAAAATAAACACATTTTTAAAGATGTTGAATTTTTCCCCCCTTATTGGGAATTCTTAAAAATAAATGCATGCATGTTTTCCCCTGAAAATGGTTTATATCTTATTTCTGG chr4 - 94230402 23156163 23156162 23156351 71074052 71074051 71074240 189 CACTGAGG--GGGGGGGCGGACGGAATGCAGCATCAGTGTTTTTTGTCTGGAAAATAAAAACTACACAAACACTTTTGTACACAAATGATTTTTTAAATAA-ACACACATTTGAAAAGATGTTGATTTTTTTTC-----ACTGGGAATGCTT---AATAAATGCATG------TTTCCCTGAAAGCAGTTTTCATTTTGTTTCTGG ..:...:.--...x....x.-:..::..x.:x:.::.x..x...xx::..::..x..........:-..................x............x..-.x........xx...........x.....::.-----.:.......x...---............------..:........:::....x:..:..:....... 8M2D10M1I45M1I34M1D32M5D13M3D12M6D33M 146/187 78.1% 189/94230402 0.0% 19/187 10.2% 16626447 NA +3016 chr4 + 190214555 39791630 39791629 39791687 58 AAAAAGTATATATATACATATATATATATACACACACATATATATATACACACATATA chr4 - 94230402 45271671 45271670 45271728 48958675 48958674 48958732 58 AAAAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA .....x:.:xx.:x.x.....x..............:......:......x...:.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -5480041 -88750361 +3233 chr4 + 190214555 39791635 39791634 39791712 78 GTATATATATACATATATATATATACACACACATATATATATACACACATATATACACATATATATACATATATATGC chr4 - 94230402 48167039 48167038 48167115 46063288 46063287 46063364 77 GTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG-GTAAATGTGC ........xxx.......:......x...:....:x.:..:.:.x..:.:.:..::...:..:...:-:..x..:... 67M1D10M 54/77 70.1% 77/94230402 0.0% 1/77 1.3% -8375404 -85854998 +3410 chr4 + 190214555 39795047 39795046 39795138 92 AGACTCCATCTCAAAAAAACAAAAACAAAAACAAAAAACAGCTTGGAGTAGAATGGCTATCACCACATCTCTTTATCCATTCAGTTTCTAAC chr4 - 94230402 51829424 51829423 51829515 42400888 42400887 42400979 92 AGTCTCATTCTTAAAAAAACAAACAAACAAACAAAAAAAAACTTGAATGAGAAAGAATGACTTTGCATCTCATGGTCTTTATAGTTTGTAAC ..x...xx...:...........x.x.x..........x.:....:.xx....x.:x.:x.x:::......x.x:..:x.x:.....x.... 92M 63/92 68.5% 92/94230402 0.0% 0/92 0.0% -12034377 -82196025 +3520 chr4 + 190214555 39797503 39797502 39797576 74 CTACAGCCTCGGCCTCCCAGGCTCAGGTGATACTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........:x::x..:.::..:...:...x.x.x.xx:x........::...........:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 21600377 NA +3398 chr4 + 190214555 39801923 39801922 39801995 73 GACCTTATCTCTTTTCTTTCGCTCTTTATTTACTTTTTTTTTTTTG-TTTTTTTTTTTTTTGTTTTTTTTTTTT chr4 - 94230402 51567317 51567316 51567390 42663013 42663012 42663086 74 GGCCATTTATCTACTCTCAAGTTCTTTGTTTACATTCTTTCTGTTGATTCTTTTTTTTTTTGCTTTTTTCTTTT .:..x.x.x...x:...:xx.:.....:.....x..:...:.x...-..:............:......:.... 46M1I27M 55/73 75.3% 74/94230402 0.0% 1/73 1.4% -11765394 -82465008 +3192 chr4 + 190214555 39806714 39806713 39806761 48 AAAAACAAAAACAAAAACAAACAAACAAAAAACCTAAACTAAACTAAA chr4 - 94230402 28943673 28943672 28943720 65286683 65286682 65286730 48 AAAAACAACAACAACAACAAAAAAAAAAAACACCTAAACTAAAATAAA ........x.....x......x...x....x............x.... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 10863041 NA +3408 chr4 + 190214555 39806895 39806894 39807052 158 TGGGTGACACAGCAAGGCTCTGTTTCAAAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGA chr4 - 94230402 56098399 56098398 56098548 38131855 38131854 38132004 150 TGGGCAAAGAAGAAAGGCTCTG--------AGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA ....::.x:x..x.........--------.:.:xx:.:..:..:xx:.:...:xx::..xxx...x.:...:..x......xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx....:.:xxx:....::..xx..x.. 22M8D128M 88/150 58.7% 150/94230402 0.0% 8/150 5.3% -16291504 -77938898 +3531 chr4 + 190214555 39806903 39806902 39807031 129 ACAGCAAGGCTCTGTTTCAAAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAA-----AAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAA---GAAAGAAAGAAAAGAA chr4 - 94230402 62511288 62511287 62511420 31718983 31718982 31719115 133 ATAGAAGGACTCTTCTCTAAAAGATAAAGAAAAAAAAG-----GAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGAGCAGAA .:..x.:.:....x:.::....:.x...::...:....-----.....x...::.x.:x.:-----..:...x::....:...:x....:......x....:.:-...:xx..x..x..---......:...:x.... 38M5D18M5I38M1I14M3I16M 85/124 68.5% 133/94230402 0.0% 14/124 11.3% -22704385 -71526017 +3292 chr4 + 190214555 39806908 39806907 39807018 111 AAGGCTCTGTTTCAAAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAA-AGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903362 10903361 10903469 83326934 83326933 83327041 108 AGGACTGAGTTTCAGAAAGGAGAAAGAAAAGACA----GAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA .:.:..xx......:...::.:..::..:.:.x.----...:..x.x.....-...:xx...x..:............:::.xx.......x.:.:.x::x...x:..:... 34M4D14M1I59M 71/107 66.4% 108/94230402 0.0% 5/107 4.7% 28903546 NA +4355 chr4 + 190214555 39806911 39806910 39807041 131 GCTCTGTTTCAAAAAAAAAAAGAAAGAAAG-AAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGA---GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAG chr4 - 94230402 30533152 30533151 30533286 63697117 63697116 63697251 135 GCTTTTCTTCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:.x:...xx...x......:.......-..:...::..:.......xx.x:..:..:x.:..:---:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:....:..:..:..x.... 30M1I35M3I66M 87/131 66.4% 135/94230402 0.0% 4/131 3.1% 9273759 NA +3155 chr4 + 190214555 39806922 39806921 39807000 79 AAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAA---AGAAAGAAAGAAAG chr4 - 94230402 24662130 24662129 24662211 69568192 69568191 69568273 82 AAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAAG ..........:...:.....xx..::x..:::.....:.x.:.:..:...x.:..:.:....x..---..x.:x..:..... 65M3I14M 55/79 69.6% 82/94230402 0.0% 3/79 3.8% 15144792 NA +3104 chr4 + 190214555 39806922 39806921 39807006 85 AAAAAAAAAAGAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 64493010 64493009 64493094 29737309 29737308 29737393 85 AAAAAAAAAAGAAAATAAGGAGGAGGAAAGTAAAAATAAGTTAGGAGGGGATGAGAAGGTGACAGAACTAGAAAGATAGTAGAAA ..............:x...:.....:.:.:x:...:x...xx.:..::.::x.....:.x:.x.:.:xx.......x..x.::.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% -24686088 -69544314 +3337 chr4 + 190214555 39806932 39806931 39806996 65 GAAAGAAAGAAGGAGAAGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 87603530 87603529 87603594 6626809 6626808 6626873 65 GAAAAAAAGAGGCAGAGGAAAGAAAGAGAGGTATGAAAGACAGGGAAAGATGAAGAAACAGTAAG ....:.....:.x...:..........:..:x.x......x..:......x::.:.:.x..x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -47796598 -46433804 +3046 chr4 + 190214555 39806974 39806973 39807057 84 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x.:xx..x.....x...::...:.........:.x..x.:xx..::::....:..:::x.:.::x......::..:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 2948681 NA +3444 chr4 + 190214555 39806978 39806977 39807119 142 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA--GAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAA-AGAAAGAAAAAGAGAGAAAAAGAAAAAGGAAGGAAGGAAGAAAGGAAGGGAG chr4 - 94230402 44053989 44053988 44054129 50176274 50176273 50176414 141 AAGAATGGAGGAGAAAGA-AAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAG---AAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAG .....x.:.:..:.:.:.-......:..:.x..::...--.::..:x:.:xxxx:...........---....x.:...x:..x.x......-........x..x:x.:..:x:.:x::.x:.......:...:.::.x..x... 18M1D19M2I26M3D23M1I52M 90/138 65.2% 141/94230402 0.0% 7/138 5.1% -4247011 -89983391 +3210 chr4 + 190214555 39806983 39806982 39807064 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx....::....:...:.x:::::x.......::... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 2948689 NA +3512 chr4 + 190214555 39806987 39806986 39807080 94 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGA chr4 - 94230402 10903375 10903374 10903468 83326935 83326934 83327028 94 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGA ......:.::..::.....x.....:.x:x..::.x...:xx...x......:.:......:::.xx.....:.x.....x:.x:.:x...:.. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 28903612 NA +3241 chr4 + 190214555 39806991 39806990 39807085 95 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA-GAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAGAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGAAAAGACAGAAA-AATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ......:.::..::.....x.....-..x.x.....x...:x-...x...............:::.xx.:.:.:.x.....x:.x:..x:.::... 25M1D16M1I53M 65/94 69.1% 95/94230402 0.0% 2/94 2.1% 28903616 NA +3040 chr4 + 190214555 39807018 39807017 39807068 51 AAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 85934331 85934330 85934381 8296022 8296021 8296072 51 AAAAAAGAAAAGAAAGAAAGAAAAAGGAAAATTGAAGTCAAAACAAAGAAA ..:....................:..:..:.xx...:xx....x....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -46127313 -48103089 +70522 chr4 + 190214555 39824268 39824267 39825514 1247 GAAAAAATTCACAAGAAAGCATATGATAAAAAGATTAAAAAGACTGCCA--TGACATCTAGAAGCATTTATTTTATGCAAAAAACTTAAATATGATTATGTGTACACATAAAGTGCACACATTACCTATGCTGAACAATGCCAAGAAACATAATATATTGATGCAACAGTTTTCTAAAATAAACAT-AAAAATGAGCCCAGACCATCAGACAAAA-GCAAAACA--CTTATTTCCAAATAGCACAATGCTGAAAATTGATAGCAATCCTAAAACACCTCCAACTTTCCTTA-AAAGCTGCCAAAGTCCAACTATTTTTTAAAAATTGATTTTTTTT-------ACAT---TAATAAAAATCTGGTGACAAACATTATAAAACCAAATGCTGGACAGTCTTTACTCCTTTAAAATTCCAAATATTCCAACATAATCACAGGAGTAAAAACCATTTTAAAGTGATATGC---TTTATGAAACAAACAACAATATGTACATTTATTGCAAATTATATTAAACTAAAATG-AGGGGAAATCAAAATATGAACTGTTTACTACTTGCAAATCAATAATTTTAA-------TTTTCTCACTCTGATAAAAATCAGAAAGCAACATTTATAAAATTGCTACCACATCACTTTTCATAGCAGGGAACCGAAATCTGTACATCTCATTTTTGCAGAAAAGTAGGCAGGCAGAAAGAATTATACATAAA--AGTTTCCAAAAGGAAAAACAAAGAAA---TATTTAATCTGATCTCTTT-----------TCTTTTAAAAAATTAATTCAGTAGACTTCTATTTTTTCCTGTGTAACATGGGAATTCCTGGCTCTAAAATGGATGAATTTTCAGTGTCAGTGTAAAGACAT-CTTGTTACTTTCTTTAAAATAA------AAACTGCAGCGTGGAAATTAATGGTGT-ATTACGCATTTAAACTCCAGATAGGCAGGAACTGGAACCAAGTGTTAAGCAATTTGCTTAATTATTGACTTTTCGTAAGAAAAGTCTAGGGGAAGGGGGAGAACAGAGTTGCTTTTAGCCTCTCTCTCAAGAGTTTCTGCTGTACATTTCCATC-AGAGGACTTGTGGTCATGTGAAAAGGAAGTAATAGTCT--CTTTAGTTTTCAAGGCAGAGAG-TGTGTGTTCTGAAGTGAGCTTCATTTTCTGTTCAGGGACATTTGTGAATCCAAGTTTTTGCAGAAGC-TGGAGCCTG-CTTCTGTTTGGCCTTCATTTTCTCCCTTTGCAAATGCATTTTTACCTTA--------GGGTTAAGAATAGAACGCAAAG chr4 - 94230402 23164521 23164520 23165813 71064590 71064589 71065882 1293 GAGAAATTAAAAGAGAAAAGGAAGGAAAAAAAAAAAAGAAAGACTGCCACGTGACACCTAGAAGCGTTTATTTTATGCAACAAACTTAAATATGATCGTGTGTACATA-AAAGTGTACAC-TTATCTATGCTGAACAATGCCAGGAAACGTAATAT--TGATGCAACAATCTTCTAAAATAAACATTAAAAATGAGCCTGAACAGGAAGACAAAATGCAAAACAGACTTACTTCCAATCAGCACGATGCTTAAAATTGAGAGCAATCCTAAA-CATTTCCAACTTTCCTTACAAAGCTGCCAAAGTCCAACTATTTTT-AAAAATTGATTTTTTTTTTTCTTTACATCAATAATAAAAATCTGGTGACAAACATTATAAAATCAAATGCTGGACTGTCTTTACTCCTTTAGAATTCAGAATATTCCAACAGAACCGCAGGAGTAAAAAC-ACTTAAAAGTGATATATGTTTTTATAAAACAAACATCAATATGTACATTTATTGCAAATTATATTAAACTAAAATGGAGGGAAAATTAAAAAATGAAATGT---CTACTTGCGAATTAATAATTTTAAGTGATTACTTTCCCACTCTGATAAAAATCAGAAAGCAACATTTATAAAATTGCCACCACATGACTTTTCATAGCAGGGAACTGAAATCTGTACATCTTACTTTTGCAGAAAAGTAGGCAGGCAGAAAGAATTATACATAAAACAGTCTCCAAAAGT-AAAGCAAAAAAACGTTTTTTTGTGTGGTTTTTTTTTTTCCTCTAGTCTTATTTAAAATCCATTCAGTAGACTTCTACTTTTT-CTGTGGAACATGGGAATACCTGGCTCTAGGATCG-CGAATTTTCAGTGTCAGTGTAAGGACCTCCCTCTGACTTCCTTTAAAAAAAAAAAAGAAAATGCAGCATGAAAATTAATGGTGTAAATACACTTTTAAACTCCAGA-ATGCAGGAACTGGAACCAAGTGTTAAGCAATTTGCTTAATTATTGACTTTTCATAAAAAAAGTCTCTGGGGA-AATAAGTACAGA--TGCTTTTAGCCTCTTTCTCAAGAGTTTCTGCTTTACATTTCCATTGAGAAGGATTAATTTCACGTGAAAGGGAAGC-ATAGTTTTCCTTCTGTTTTCAGAGCTGAAAGCTGTGTGTTTTGAAGT-AATTTCAGTTCCTGTACAGGAA-ATTTCTGAATCCTAGTTTTTGCAGAAGCTTGGAGCATGCCTTTTATTTGGCCTTCATTTCCTCCCTTTTCGAGTGAGTTTTCTTTTTACCTTTTGTGGGGGGAGAAAAGGAAATAAAG ..:...x.xx.x:.....:x:x.x..x.....:.xx.:...........--.....:........:..............x...............::........:.-......:....-...:..................:.....:......--..........:.:...............-...........:::..x:xx........-........--....:......x:.....:.....x........x............-..::..............-..........................-.................-------....---...............................:............x...............:.....x:............x..:.:.............-.:..x..........::---.....:.........x........................................-....:....:....x.....x...---........:...:...........-------:....:........................................:.......x...................:...............:.:.........................................--...:........x-...:....:...---.x...x:.x..:.:.:...-----------....x.xx.....:x................:.....-.....x...........x..........::..x.-:.....................:...x.-.:.x.x....:........x..------...x......:..:.............-.x...:.x.............-.x..................................................:...:........xx...:.-::x:..x.....--..............:.................x...........:-...:.:x..:xxx...:......:.....:-.....:.--...:x.......::..x..:..-........:......-.::....x..:....x....:.-....x.......x...............-......x..-...:.:..............:........x.:.:..x:....:x::...--------...xx:....x..:.x::.... 49M2I57M1D11M1D35M2D28M1I28M1I8M2I46M1D18M1I26M1D17M7I4M3I99M1D17M3I56M1I24M3D24M7I134M2I13M1D12M3I19M11I37M1D34M1D28M1I22M6I27M1I21M1D72M1D12M2D45M1I30M1D7M2I22M1I15M1D22M1D28M1I9M1I49M8I22M 1060/1227 86.4% 1293/94230402 0.0% 86/1227 7.0% 16659747 NA +8449 chr4 + 190214555 39827296 39827295 39827498 203 CAAAGAATTATTT---ACAAGCTGCCTGCTACACCTTCAGGAAGCTTCCCTTTCCTAGCCCTGAGTCCTCTGTATTTCTTGGGCTGCTCTCACAGACTTCTGAAAGACCCAGGTCACT---GGAAGAGCTCCTGGACTTGATTCTATGTACCAAGATGAACTGCCATCACTG-CAAGCACTTGGCTTCTGAAAAAT-TTCATGTTATTTTG chr4 - 94230402 23166325 23166324 23166533 71063870 71063869 71064078 209 CACAGAATTGTCCTACATAAGATGCCTGCTACACCTTAAGGAAGCCTCCCTCTGCTATCTCTGTATCCTCAGTGTCTTCCTGGCTGCTCTCACAGGTCTTAAAAAGATCCATTGCACTCTGGGAATAG--CCTGGACTCGAGTCTATCTCCAACAGTGAATCTCCATCACTTCCAAGCACCTGGCTTCTGAAAAACGTTAACACCGTTTTG ..x......:.::---.:...x...............x.......:.....:.x...x.:...x:.....x..:.:.:::x..............:::.:x:.....:...xxx....---....x..--........:..x.....x.x.x.x::....::x........x-.......:..............:-..x.:::::..... 13M3I102M3I7M2D42M1I23M1I14M 149/201 74.1% 209/94230402 0.0% 10/201 5.0% 16660971 NA +18894 chr4 + 190214555 39837852 39837851 39838252 401 TTACCTTTGTAAGTCAATTTGTCTTTCTGCTGGTGCTGCCTTTTTGGCTAAATCTTGCAGTTTGGGTGCTTTGGCATTACCTGCTTCCAAACCCCCAGGGCTCTCCTGACCCACTGCAGCTCTCTTCCTTCCCTTGTTAATAGGTTTATTTAGATCATCATTTTTGGTAGCATTGCCCTGAGATTCAGACTTGGGTCGACGTCCTCTCCTGGGTTTGGAAGGGGCGGGAGGTCCCGATTCATCTAC---TTTCTCATCTGTTTTTTGTTGGATATTCTCTGCACCAGCTGCTGTTACTGTTCTTTTCTTTCCTCGGTCACTGCTGATGTTGCCCTGGGTAGCCTGATCAGAATTAATTTCCTAAAAAAGCACAAAACAATTCTATAAACACAAATTCCTTAAAT chr4 - 94230402 23167521 23167520 23167920 71062483 71062482 71062882 400 ttaCCTTTGTAGATCGATCTGTCTCTGTGCTGCTGCTGGCTTTTTTGCTGTGTCTTGCTGTTTTGGTGCTTTGGCGTTACCTGCCTCTAAACTCCCTGGACTTTCTTGACTGGCTGCTGCCCTTTTTCTTCCCCTGACAGGTGGCTTATTTGTTTCCTCATTTTTTGCAGTGGTACCCTGAGGTTCAGGTTTGGGTGGACGCCCTCTCCTGGTTTTTGCTGCAAGCGATGGTCCTGTTTCATCTGCATTGTTTTCTTCTGCTTTCTGATGAATATTCTCAGTTCCAGATGCTGTTGCTGTTCTTTTTTTCCCACGTTCAGTACTG---TTTCCTTGCGTAGCCTGGTCAGAATTAATTTCCTAGGAAAG-AAAAATCATTAATGTGAAGAAAGATCGCCAAAGT ...........::..:..:.....:.x.....x.....x......x...:x:......x....x...........:........:..:....:...x..:..:..:....:x:....x..:..:..:......:..x:.:xx..:......:xx..x........x.:..::x.:.......:.....::......x....:..........x...x.xx.x::xx.:x.....:.x.......:.---x..:..x....:...:..x..:........x.:x....x.......:..........:..:..x..x...x.:...---..x..:..x........:.................::....-.x...x..x.xx.:.:..x.x.:..:x.:x..:. 246M3I76M3D41M1D34M 293/397 73.8% 400/94230402 0.0% 7/397 1.8% 16670331 NA +7242 chr4 + 190214555 39841932 39841931 39842080 149 AAATTTTAAAATTTACCTTATTCTTTACTGGGTCAATATTCTTTACAGGTGTGACTGAAATAATCCTCACAGGGTTCTCTTCATTTTCACTAACTCCAGTTTCTGCTGCCTCTGAACTCTGTTCCCTG---------TTTAAAACAAA--TAAACCAAGA chr4 - 94230402 23171167 23171166 23171323 71059080 71059079 71059236 157 AAATCCCCAAACATACCTTATTTTTCACAGGTTCTGT---CTTTGCTGGTGTGACTGAAATAATTCGCACAGGGTTTTCATCGTTTTCACTGACACCAGTTTCTGATATATCTGAACTTTGTTCCCTGGTAGCATAATTGAAGACAAAATAAAGCCAAGA ....:::x...:x.........:..:..x..x..x:.---....:.x.................:.x.........:..x..:........:..x..........x.::x........:.........---------..x..:.....--x..:...... 37M3D88M9I11M2I10M 116/146 79.5% 157/94230402 0.0% 14/146 9.6% 16670765 NA +9214 chr4 + 190214555 39844653 39844652 39844812 160 TGCCTTGATCGATTTCCGGTTGAAGGGTTCAGCTCTGAATTTACATTAATATTGCTTCCAGTCTCAGTGCCAGTGCTTCTAACATAGGGTTTCCTTCCCGTTGCTGATAAAGGCTTATTTACTGCACCTAGTACTCCAGCAGGCTTTGGCTAAAAACAAA chr4 - 94230402 23171650 23171649 23171809 71058594 71058593 71058753 160 TACCTTGATCTGTTTCCTGCAGAAGAGCTCAGCTCAGAGTTTACACTGATATTGCTTCCAGTCTCTGATCCTGTAGTTCTAATATACGGTCTCCTTCCAGTTGCAGACAATGGTTTGTTTACTGTACCTAACACACCAGTTGGTTTTGGCTAAAAGAAAA .:........x:.....x.:x....:.:.......x..:......:.:.................x.xx..x..:x......:...x...:.......x.....x..:..x..:..:.......:.....::..x....:x..:...........:x... 160M 124/160 77.5% 160/94230402 0.0% 0/160 0.0% 16673003 NA +5765 chr4 + 190214555 39845785 39845784 39845892 108 ACAAAGATCTCAAAATTATTAAGTAAATAATACCTTTCCTGTTAACAGAAGTACTCTTGTCTCTTCTGAAATATAACTCTTATCGTTACAGAAGTCCTATTAAAAAAA chr4 - 94230402 23175261 23175260 23175367 71055036 71055035 71055142 107 ACAATAATCTTCAAATTGACA-GAATACAGTACCTTTCCTGTCAAAAGAAGAACTCTTGTCTCTTCTGAAATGTAATTCCGGTCATTGGAAAAATCCTATTAAAAAAA ....x:....:x.....:x:.-.x.x.:.:............:..x.....x....................:...:..:x:..:..:x.:..:.............. 21M1D86M 83/107 77.6% 107/94230402 0.0% 1/107 0.9% 16670524 NA +14414 chr4 + 190214555 39848841 39848840 39849657 817 AGAAAATTACCTTTTCAGGTTGTGTAAAAAATTTCATTGGGAGGACTGGGTCCTTTGGTGAATCTGCATTGCACAAAGCACTTTTACTATTTATAACACAGAGAGCCACATCACATACTGTATACAGTTTCTAGGGAGGAAAACGAA--------TCATATATAACTTTTAGTATTGCAAAATAATCA--TAATTACCAATTCCACTAAATGTATAATTTAGAGTTA--------AAAGAAGGATACTGTGGTT--------------GTTATTTATTCCTTGAACA-----TTCCATATTTCT-GTTCAGCACTGTTTATGCAGCCTTCTGATAAATAAAAATCCCTCTATATGAATTTAACATGGATGCCAATATGCATGGAAAATAACAAACAAATGAACCAACCCAAAGAAAGCACACAAAAAGAATAAGCATTTGTCTGTAACTCTTACTGTAAGTTCGTAA------TATACCATAGTTGT-ACATTTTATTCTTATCCTCTTGCTCTAAGGTTATAATGTCTTTTCAGAGTACTAAAGATTCCTGAAATAAAATTCACTTGTAATGAAGTGCAATAAAAACTGACTACACATTTACTTTTGTAAACATTCTA-------------------------AAATTT-----------AAATTACTA-CGTATGGCCAA---------------------AAAAAAAAAAAAAAAACCAAGTGGGACAATATATTTTTCTATTACATCTTAAC-----------------ACCCACTGGCCTAACACTCA--------------------TCTTACTTCATTTGTCTTGGATTCATCTGGAGACTGGGCATCTCTGGTTAACTTGATGTTCTCTGCCATCTTCTTCATAAAGGCATGGCTATTGTTTTCATTCTTTGTCATTAAAACTTCAAGCATGAACCATAGGCACCTAAA chr4 - 94230402 23176556 23176555 23177447 71052956 71052955 71053847 892 aaaaatttaCCTTTTCAGGTTGTGTAAAAAATTTGGTTGGCAATACAGGGTCCTTTGGTGAATCTGCATTGCATAAAGCACTTTTGCTGTTGATTACACACAGTGCTACATCACATACTGTATAAAGTTTCTGAAGAAAAAAAGAAAATTATGGTTTAGGAATTACTTGCTGT---GCAGAGAAAGCAGTTCTTTAGCAA----ATTGAATCTGTA-TGTGAAATAACCACTCCTAAGGACATATTTTGTAATTACATCATTAACCATGCTGTTGGCTCCGAAAACAGAGAATTCCTCATTTTTCATATTACACTATTTA------------ATAAAACACAATAAAACTACAGACATCTAAGCTGTACA---------ATAGAAGCTGTTAATCAAAT------------------CACAAAAAAATCATAAA----------TGGTTTCTCTTCTCAGCTGGTAACTGATGTATTTAACAGCGGCCATATACTACT-GTATTTCCTCAACAACAGAAAATAAT--TATGCTGGAAAATTACGTATT--TGGAATTAAAATAAGCACTAGGGAATAACAGGAATATTTAACCA---ATTTTGTTTAATAACTTCTCTGGTGCTGTGTACTGGCTGAGACCAACAAGTTTCGGAAGGAATGAGATTGGTAGCATACAGACAATGCTTGCAATTAGCACACTCTAAAAGAATTTAAACGTCTAAGCTAATGCTTTTGCATTTCCTGTAAATCCTGTCCAGCAAGTAGCTTGTGAAACCCTTAGCCCATCACCAAACGCTTATCTGCACTGCACTTCTTACCTCATTGGCCTTTGGCTCATCAGGAGACTGGGCATCTCGTGTAAGCTTGATGTTTTCTGCCATCTTTTTCATGAAGGCATGGCTATTGTTCTCATTCTTTGTCATTAAAACTTCAAGCATGAACCACAGGCACCTAAA .:...x............................x:....x.:x..x..........................:...........:..:..x..x.....x..x..:.................x.......:::..::....x:..--------.:.x:x..x....x:x..---...:.:x..x..--.xx...x...----.:.:...x.:..-.x.::.:.x.--------..:..x:x..x:...::..--------------.:.:..x::...xx:....-----....x:....:.-:.x:x:....:....------------.....xx.x...xxxx...:.x:x..:...xx..x.::---------..:...:x.:x:..x.....------------------....x.....xx....:----------.:::.::.x:.x.x..:.x....------...x:x.:..:x.:-.:..x:..:.-x...:::..::x:xxx..:xx.....--:x.x:::..:x.:..x:x...--..:...x...x.x.x:xx..:x...xx:..:x..x.x:.:..:.---....xx...x:...x:x:...:-------------------------..:...-----------.:...:x..-.:..::.x...---------------------....:..xxx...x:x.:...:x::xxxx.x.::x....:xx..x...:.:x.-----------------.x..x:.:...:.x...:x.--------------------......:.....x.:...x.::.....x................xx..x.:.........:...........:.....:.................:...................................:........... 147M8I18M3D12M2I10M4D12M1D10M8I19M14I19M5I12M1I15M12D38M9D20M18D17M10D23M6I14M1I10M1D26M2D21M2D44M3D22M25I6M11I9M1I11M21I53M17I20M20I144M 515/752 68.5% 892/94230402 0.0% 205/752 27.3% 16672285 NA +30875 chr4 + 190214555 39862165 39862164 39863481 1317 TTTTTTGAAAACTAAACATAATTTTTAGAGTTCTTGAAAAACAACAAGACTTACTCTTTGATATCACGAAGCTGATCAACATCTTGTGATCTTGTAAAATCTGGATCATGGGCTAGCAGGTGAATCATGTATGGAACTACATATTCAGGCAACAGTGATAATAATTTCTCTGAAGTAAAAAC--ATTATTAAAAACAACCTTTATA----------------AAATGCCTTAGTGGACTGAGTTCTAACCACTTAAGTTTTCATTTTTTCCCTCAGTTATTTCTAAATTAGGCACAACATGATACCTGGATACTAAAATACTTTACACTTCACTTTTCAATTTCTTT---TTCTGGTACCTGGTATGCAGTTGTATTTCACTTTTGAAA------GATACTGA------------AGTCAAAGGTATCAGATATTAAACC------------CATTAAACA---ACAGGTCCCTGGCAAAGCTAGGAAAAAATTATTTAGTCTGACATCCGAGCAATATGTTCAAATTAAACTACACTCCTGATCCCATAGGAAAAATGCAGTTTGCCAGAGTTAATGCAGCATAAATAGGACTCAGGAGTTCAGTTTTTAAGTACATCA-TAACTACAATGACAGCATTCTA---------TAAAACTCCCAG-----------------TTTTATTATAAA--CTATAATAGA----------------------AACACATGACAAGAAAAAAAAAACCTAAAAATGG-ATACATTGACAAAATATATTTGCACA-----------------------------CGGAGAACT---------------------CTGAGTTACTTACCAGTAGCCATAGGATTCTGCTTAATGTATTCCCTGCGTATACTGATATTTTTCAGTAAACATTGTCGTGCGTGTGCTCTTCTCTCCTTCACAGGATCTTTGGCACACAAGGCAAAGATCGCCATATACTCCAATGGGAGCAGTAACTTCACAAGTGCCTTATGCAGCTTCTGAGCAAATATCTGCCTTACTTGGTAACACTCATCCTACAGCAGCACAGAAAAACTTAAATTGGCAACCATTTATTAAATAAAAAACAGCAGTTTAAGTATTTTTAGTGTCTTCAATTAAAAAGAAGATAATTATATGGGAGAATAAATAA-TGTAATAATTGGAAGACA-GTTAAACAGGTAATAATAGTAGTGACTTTTGTGCATATATTCACATTATAAATGGATTTGTATCCATAGAA---------------------AAGTAATGTATTCAAC-----------TTTGAAGATAAGTAATTGA-----------------CAAAAATAAGATTGTTACTTACATTAATAACAAGTGCACAGAGCTGAAACTGTTCTGGGGTAATAATTTCATGGTAACAAGGTTCCTGAGCAAGCTTCATTATGGCACTACCAGCAGCTAATCGCAAGCGAGACATATCAGATTTACTATAAACAAACAAAAAAGAAA chr4 - 94230402 23179028 23179027 23180393 71050010 71050009 71051375 1366 TTTTTCCAAGCACAGGCAATAGTTCTAGAATCATT---------TAACACTTACTCTTTGACATCACGAAGCTGATCAACATCCTGAGGTTTTGTGAAATCTGGATCATGTGCCAGTAAATGAATCATATATGGTACCACATATTCAGGCAGCAAGGACAGCAATTTTTCTGCAGTAAGAAACAAAAATCATAACTAATCTCTTTGTTACACATACATACAGACATGCATCACAAGACAAAATATTG-----TCAAGTATTACTTTT---------------CCAAAT---ACAGAACATAAGACTTCAGTCT--GCATTCTTTTTCCTGCAGATTCTAATTTCCATgaatcatagaa--tggtttg-ggttgcaagggaccattaagatcacctggttctgaccctccagctataggcagagacacctcccattagaccaggttgcccCATCATTAAATATAAATGAGTTTT-------ACTACTTCAGAACTATTTGGCCCCACATCAGGAAGAGATCATAAAACCTAAC-------------ATATAAGAAAA--------------------------------------CAAAATTTTATTTTTCAAGCAAAACAGCTACCAGAATAACAGCACTGTACTTTACATGTATATTTCGCAGCAATGTACAGAGAAGTATTTTATGGTTAATGCTGAAGTAAATTTAGGTAATTTGGGTGTGATAAATATATTAAAAAAATGAGAAAAATTAAACTTTGTATTTATTTAGAAAAGTGATTTGCTTAACTTTTAATGATTACTTCTTCCAATTTAGCATTCAACTATTGTATTCTTCACAATTCTACTGAAACACTAACCGTTAGCCATAGGATTCTGCTTAATATACTCTCTTCGTATACTGATGTTTTTAAGCAAGCACTGTCTGGCATGTGCTCTTCTCTCTTTCACAGGATCTTTGGCACACAAAGCAAAGATTGCCATATATTCCAAAGGGAGCAGTAATTTCACAAGTGCTTTATGCAGTTTCTGGGCAAATATCTGCCTCACTTGGTAGCACTCATCCTATAACAAAAT---AAAACGTGAAAATGCAACCAT------AATAA---------------------------TCTT--GTTTAAAACAAAACAAAAAT---GAAAAACATCCAACTGGAATGATGGGGAGACATGTTTTAAAAATATCAACA--AGTG----------------TCATACAATAAAT--ATTTGAAGCTTCAAGAACTCTTGCAATGAGCAATATTAAATAATCAATTCAGCAGCAACAAAAGCTCGGATGTAAGGACTTGAAACTCTGAGAATCACTTCAATATAAAAGTAGTTACTTACATTAATGACGAGCGCACAGAGTTGGAACTGTTCTGGGGTAATTATTTCATGGTAACATGGTTCCTGTGCAAGCTTCATTATTGCACTGCCAGCAGCTAATCGTAGTCGAGACATATCGGATTTACTAT--ACAAACAAGAGGGAAA .....:x..:xx:.::..xx.x..:....:.:x..---------:..x.............:.....................:..x.:.:....:..............x..:..:.::........:.....x..:.............:..:x..:.::.....:....x.....:..x--.xx..:.x..x:..:..:.x.:----------------.x....x.:.xx:...x:.:.x:.:-----.:....x..xx....---------------.:....---:..x.....:.x..:.x::.x:--:x..x....x:x..x..xx..::......:x.---.:x.:.x.--....x..-:....:.xxxx..:x..:.:.------.:.x....------------..x..:..::.:.xxx:....:...------------.......:.---.:::..:::-------:...xxxx.:..:.....:.:.:x.....x.::x:.x..xx.x...::x...-------------x:...:.....--------------------------------------..::.x..:.x....:...:.x.x..-:x..:.x...:......:.x..---------..x.x:..x...-----------------......x:.x..--..:x.:..:.----------------------..:.:..x.x..:..x:.:....x:....xx.x.-..x:...x.x....xxx......x:.-----------------------------.:xxx....---------------------....:x:...x...:x......................:..:..:..x...........:.....x..:..:..:....xx..:..............:.......................:........:........:.....x...........:...........:........:.....:..............:........:...........:.:..:x.:---.....x.:..xxx........------.....---------------------------....--:..x....x..:.:..xx..---.:.:..:.xx:..-..x...:..x..:.....-...xx.x.::..x:..:.--....----------------...:.:x......--.....x.x.:x:.::.---------------------..:....xx.....:.-----------:.:.:.x:....x.x....-----------------...x.xx..::.x...............:..:..:........:..:.................x..............x........x..............x.....:..............:.:x...........:..........--........:.::.... 35M9D138M2I22M16I25M5D15M15D6M3D22M2D32M3I8M2D7M1D21M6I8M12I25M12I9M3I9M7D52M13D11M38D26M1I22M9I12M17I12M2I10M22I34M1I26M29I9M21I230M3D21M6D5M27D4M2D20M3D13M1I18M1I18M2D4M16D13M2D16M21I16M11I19M17I150M2D16M 847/1159 73.1% 1366/94230402 0.0% 365/1159 31.5% 16683137 NA +3148 chr4 + 190214555 39864127 39864126 39864204 78 TCAAAAAAAACAAAAAACAAAAAACAAAAAACAAAAAAACTTGATTAAAAAAACCACAAAGAATTAAAAAAAAAATCA chr4 - 94230402 86829987 86829986 86830064 7400339 7400338 7400416 78 TCAGAGAAAAAAATAAACAAAAAACAAAAAACAAATACCCTTGAGTGAGGACATCATACATCAAGAAAATGATAATTA ...:.:....x..x.....................x.xx.....x.:.::.x.:..:.x.xx.xx....x:.x...:. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -46965860 -47264542 +10693 chr4 + 190214555 39866808 39866807 39867035 228 AATTCCACCAAAATTTCAGCACTAAGAAAACTGGAAAGAAAGAAAAATCTCACCTGATCCTCTTTTGCTCTGTCAGGTCACCCTCACTAACCAACATCGCTGATAATAACCGAAGGGTTGAATTGGCAGATTTAGACTGGTTGTTTTTCATACCCAACAGCCACCTTACCAGAAGTTTAATTGCCTGTACCTATAAAATATTAACATGCTAAAAAAAGAAAGCAACTT chr4 - 94230402 23181027 23181026 23181247 71049156 71049155 71049376 221 AATTCCACAACAATATTATTAC----AAGCCT--AAAGGTAACAGAATCTGACCTGATTCGCTTCTGTTCTGTCAAGTCTCCTTCACTGACAAGCATAGCTGATAACAATCGGAGTGTGGAATTTGCAGATTTTGACTGGTTGTTTTTCATACCCAGCAGCCAGCGTACCAAAAGTTTAATTGCTTGCACCTTTCAAAAATGGACAAAC-AAACAATGAACGTACTTT ........x.x...x.:.x:..----..:x..--....:x.:x.:.....x.......:.x...:..:.......:...x..:.....:..x.:...x........:..:..:..x..x.....x........x......................:......x.x.....:............:..:....x.x...x..x:...x:.-...x..x...x.:.x:.. 22M4D6M2D175M1D18M 170/221 76.9% 221/94230402 0.0% 7/221 3.2% 16685781 NA +7401 chr4 + 190214555 39869335 39869334 39869485 151 ATAACTACAAAATGTCCCTTTTTTAAACATGAAGAT---------TATCAAGGCCTAAACAAATTTACCTTTGCTAGTACTTCAGGGGAAACCTCTTCATCTGGAGACCACAGTTTTCCATTCTTTTCACCTGTTGACTATAGACAATTGAATAAATTTA chr4 - 94230402 23181809 23181808 23181966 71048437 71048436 71048594 158 ACAACTTCAAAATAGTATCCTTTTAAACTCAAATATATACATTATTATTGGGAGCTGACCA--TTCACCTTTGCTAGTACTTCTGGAGACACCTCTTCATCTGGAGACCACAACTTTCCATTTTTCTCACCTGTTGACTACAGATACTCATGTAAGTTTA .:....x......:x:x:::........x::..x..---------...:::.:x..:.x..--..:.................x..:..x......................::........:..:..............:...:.x.::x:...:.... 36M9I16M2D97M 113/149 75.8% 158/94230402 0.0% 11/149 7.4% 16687526 NA +13648 chr4 + 190214555 39872971 39872970 39873158 188 AAATGAGAAACTTACCCTGTCATTCATTAGCAGATCTTTCACAATAAAATTTGCTACTACAGATTTCATTGGGGAAGCAAACTGATCTGGTGCTAACATAGAAATGTGGCCCAATGAAACTAATGGAGTTATAAGTTGTTCTGGCACATCAGCATTCAGACTCCTACTGAGTGGCTATAAAAATAAAA chr4 - 94230402 23182195 23182194 23182382 71048021 71048020 71048208 188 aaaagaaaaTCTTACCCTGTCATTCATTAGAAGATCTTTTACAATGAAATTTGCAACAACAGATTTCATTGGAGAAGCAAACTGGTCTGGAGCCAACATAGAAATGTGACCCAGTGAGACTAATGGAGTTATAAGTTGTTCTGGTACATCAGCATTCAAACTTCTACTAAGAGGCTGAGGGAAAAAAA ...x..:..x....................x........:.....:........x..x..............:...........:.....x..:..............:....:...:..........................:.............:...:.....:..x....:x:::..x.... 188M 162/188 86.2% 188/94230402 0.0% 0/188 0.0% 16690776 NA +9890 chr4 + 190214555 39874245 39874244 39874432 188 AAAAATAAAGACCAATAT-AAACACAACCTATATATTAGATATACCTCAAAAATCTGTGCAAGCTGGACTTCTTTATTTGTGAATATGGCGTGTATACAGTGCACAGCCTGTTTTGCTTGGTGTGGAGTACCCCTCTTTGCTTTTTGATGTAAAATGGGAATTAAGGTCCTGCAAA----AAATAATATAGTT chr4 - 94230402 23183546 23183545 23183736 71046667 71046666 71046857 191 AAGAACAGAAACAAATCTTAAAAACAAAAAAAGCA--AGACATACCTCAAAGATCTGAGCAAGTTGCACTTCTTTATTTGAAAATATGGCATGTATACAGTGAACGGCTTGTTTTGCCTGATGGGGAGTGCCTCTTTTTGCTTTCTGATGCAAAATTGGAATTAATGTTCTGTAAACATTAAATAAAATACTT ..:..:.:.:..x...x.-...x....xxx.x::.--...:..........:.....x.....:..x.............x:........:...........x..:..:........:..:..x.....:..:..:........:.....:.....x........x..:...:...----......x...x.. 18M1I16M2D139M4I13M 148/186 79.6% 191/94230402 0.0% 7/186 3.8% 16690699 NA +13153 chr4 + 190214555 39876978 39876977 39877167 190 AAAAAATGTACTCACGATCGTATCTGGGGAAGGTCTGTTTCTATTTTGTGACCTGTATTTCTAAAAATTTGAATAGCAGCTTCTGCTACCTTGTCATCCTCCATTCTTAGGCACTGTAACAAGGACTCATATGTCTCTGCAGAGTGGAACGAGGTAGGATGTGTAAAAGACAGAACCTGAAAAAACAGAT chr4 - 94230402 23185530 23185529 23185719 71044684 71044683 71044873 190 AAGAAATACACTCACGATCTTATCTGTGGCAGGTCTGTTTCTATTTTGTGACCCGTGTTTCTGAAAATCTGTATGGCTGCCTCAGCTACCTTATCATCTTCCATCCTGAGGCACTGCAGCAGAGACTCATAGGTCTCCGCAGAGTGAAACGAGGTAGGATGTGTAAAGGACAGAACCTGTAGATACATAT ..:....::..........x......x..x.......................:..:.....:.....:..x..:..x..:..x........:.....:.....:..x........:.:..::........x.....:........:....................:...........x.:.x...x.. 190M 159/190 83.7% 190/94230402 0.0% 0/190 0.0% 16691448 NA +9773 chr4 + 190214555 39879721 39879720 39879856 136 AAAATACCTTAAGAAGTTCAAGTCCTGAACGGATAGCTGTATCTGGACTTACACCCTCCTCTTCATCATCTGCTGTCCCCTCTATTGACTTATTCATCAATTTCACTAGTGCACTATAAAAAGA---AGAAAATATAAA chr4 - 94230402 23187188 23187187 23187326 71043077 71043076 71043215 139 AAATTACCTTGAGAAGTTCAAGTCCTGCACGAATTGCAGTATCAGGACTTACACCCTCCTCTTCATCATCAGCTGTCCCCTCTATTGATTTATTCATCAATTTTACTAGTGCACTAAAATAAGAGATAGAAAAAACAAA ...x......:................x...:..x..x.....x..........................x.................:..............:............x..x....---......x.:... 124M3I12M 122/136 89.7% 139/94230402 0.0% 3/136 2.2% 16692533 NA +3556 chr4 + 190214555 39883269 39883268 39883334 66 CTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::..........x...x..x.x........::.:.........:.:....--.::....... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 21686130 NA +3446 chr4 + 190214555 39885226 39885225 39885315 90 GACAGAGCAAGATTCCTTCTTAAAAAAAAAAAAAAAAAAAGAAAGGAAAAGAAAAAGACAAAAGAAAGG-AGAAGAGAAGAGAAGAGAAAA chr4 - 94230402 46924858 46924857 46924948 47305455 47305454 47305545 91 GGCAAGGTAAGATTTCTGCTTAAAAAATAACAGAATAAAAGAAAGTGAAGAAAATTGTTTGAAGAAAAATAAAAGAAAAAAAATGAGGGAA .:..::.:......:..x.........x..x.:..x.........x:..::...xx.x:x:......::-.:....:..:.:.x...::.. 69M1I21M 61/90 67.8% 91/94230402 0.0% 1/90 1.1% -7039632 -87190770 +10675 chr4 + 190214555 39890219 39890218 39890412 194 ATTTTTGAGCGAATATA--CTTCTTGGCTTACCTTATGGCTTCTGAATCAATGTGCACAGGTGCGATTCTTTCCAACAGAAATTTGACCATCTCTAGAAAAGGATTTGTTGGTTGCTTAGGATTTGCAAGTTTCCGGGCTATTTCTCTCTATAGAAAGAAAGGAGTTTTACCAAAAACGTGATTTGCTTTCATATT chr4 - 94230402 23188003 23188002 23188192 71042211 71042210 71042400 190 ATTCATGAGCTGATAGGATCTTCCAAACTTACCTAATGGCTTCTGAGTCAATATGTACAGGAGCAATTCTTTCCAAAAGAAATTTGACCATTTCCAGAAAAGGATTTGTTGGCTGCTTAGGATTTGCAAGTTTCCGGGCTATCTCTCTCTACAAGAAT------GTTACATTACAAACAATAATTATTCTCATTTT ...:x.....x:...x:--....:x::.......x...........:.....:..:.....x..:...........x..............:..:.................:.............................:........:.::..x------...x:.::.x....:xx.x..::.:....x.. 17M2I139M6D32M 150/188 79.8% 190/94230402 0.0% 8/188 4.3% 16702216 NA +12280 chr4 + 190214555 39898362 39898361 39898855 494 AAAAAGTGTGAAGTATGATTTACTAACCACACAAATATCTGCTTGTTTGCAAGAACAGGTTGGGCTAATTAATAACTCCAACTGAGACCGAAGTTTCTCATCATCGCCGAGAACCTGGTTAAATTTCTTCACAAAATCTTGTGCTTTCCCGGGGTCAGGCAAATTCTCTATAAAATTAAAAGAGAATCAATATTAGAGAAGGAAAAAAAAAAAACTATTCTACTAAGCTAAAAACAGGTGCCATCAAAATATTGCGGAGCCACTAAAAGAAAATCAGCCTAGCTGGTTCTTAGAAACAAAATTAAGATAAAGATTATTTTCTTTTACTTAACATTAAATCAGTAGTCCCACTGGGTAAATACTTTGTCTGCATTTACGTTTACTACATGTTTAGTGAGTAAATAAACATACTCACTTGCTATGGTCATCAGTTTTCCAAACATGGCAGAACAGTTAGCCTCTGACTGA----AATTTAAAACAGAAACAAAAGAACAA chr4 - 94230402 23189578 23189577 23189942 71040461 71040460 71040825 365 AAAAAGTTTGCTTTTCCATTTCCTTACCACACAGACATCTGCCTGTTTACAAGAACACGTAGGGCTAATTAACAGTTCAAGCTGGGACCGAAGCTTTTCATCATCGCCTAGAACCTGATTGAATTTCTTCACAAAATCTTGTGCTTTTCCAGGATCTGGAAGGTTTTCTATATAATTAAACACAGTTTAATATAAGATAAA--------------TTTGCTACT-------------------------------------------------TCAGTATGAC--ATTCACAGAA--------------------ATTTTATTTCCAAGAACGTTGTAACAGCA----------TTAAAGAACTTGTT--------------------------------------AACACTTACTTGCTATGGTCATCAGCTTCCCAAACATGGCAGCACTGTTTGCTTCTGACTGGGGACAACAGCAAACAAAAACAAACAAAAAA .......x..xxx.x:x....x..x........:.:......:.....:........x..x...........:.::..x.:...:........:..:...........x........:..:..........................:..:..:..x..x.::..:......x.......x:x::x.:.....x...x..:--------------.x.x.....-------------------------------------------------....:x.::.--:...x:....--------------------.....x...:xxxx...:..:x.x...:.----------x....x.x:....:--------------------------------------x.:...:..................:..:.............x..x...x..:........:----..:xxx.....:.......x:..x.. 201M14D9M49D10M2D10M20D29M10D14M38D62M4I26M 273/361 75.6% 365/94230402 0.0% 137/361 38.0% 16708784 NA +6593 chr4 + 190214555 39900373 39900372 39900522 150 AATCTGAACAGTGACTATAATAAACTATGAATTTAAACAAATCATGAACCTACTGTAGGCTGCTTGTGCAAATCCAATAGTTCGCGTACATGGCTCCGAAGCATGTTCTGACACTTCCACATTTCGTTGAGAGCTCTGTAAAGTTATGAA chr4 - 94230402 23190474 23190473 23190618 71039785 71039784 71039929 145 AGTCTAACAAGTCCATTTAATGAAGTATTAATTTTTTCAAAAC-----CGTACTGTGGGCTGCTTATGCAAGTCTAGTAATTCTCGTACGTGACTCCTCAGCATGTTCTGGCACTTCCACATCTCATTCAGTGCTCTGAAAAAGTGCAAA .:...:.xx...xxx.x....:..x...x.....xxx....x.-----.x......:........:.....:..:.:..:...x.....:..:....xx...........:...........:..:..x..x......x...:x.:::.. 43M5D102M 107/145 73.8% 145/94230402 0.0% 5/145 3.4% 16709899 NA +9196 chr4 + 190214555 39902313 39902312 39902489 177 AGAAAATACAGCAGTTATT--------TGAAAAGTAACTTACTTTACAGCATTTGGATCCAAACTAGCATATAAGTAATATAAGCATTTCATTCTCTCTTCTGTTTCCAGGTTGTGGGGGACAAGATACTGAGCAAAGATTTTCTCTACCAACAGTCT--AGGAAATAACAACAACAAAAAAAACCT chr4 - 94230402 23191028 23191027 23191209 71039194 71039193 71039375 182 AAAAAACCCAGTAAGTATTAGCTGAATTGGAACTATACTCACTTGACAGCATTTGGATCCAAGCTGGCATACAAATAGTACAAGCACTTCATTCGCTCTTCTGTTTCCAAATTGTGTGGAACAAGATACTGAGCAAAGATTTTCTCTACTAGTAATCTGCAGGAA-----AAGAAGAGATAAAATCT .:....:x...:.:x....--------..:..xxxx...:....x.................:..:.....:..:..:..:.....:.......x..............::.....x..:.............................:.::.:...--.....-----..x..x.:.x....:.. 19M8I131M2I5M5D17M 138/172 80.2% 182/94230402 0.0% 15/172 8.7% 16711285 NA +12238 chr4 + 190214555 39904034 39904033 39904193 160 ACTCACTTGTCGTCAATGCTGTTCTGATAATAAATATGCAGAAGTTTGTCCTTTATCCAGCTGACTTTCTCTGCAGCTTCCTTTCCTGCTTCACCATGAAGACAGTATTTCTTATAAAGCTGAGCCAGACCCATCATAGCTTCTTTTCTTACTCGCCACT chr4 - 94230402 23194749 23194748 23194908 71035495 71035494 71035654 160 ACTCACTTGTCATCAATGCTATTTTGATAATATATGTGCAAAAGTTTATCCTTTATCCAGCTCACTTTCTCTGCAGCATCTTTTCCAGCCTCGGCATGAAGACAGTATTTCTTGTATAGCTGGGCAAGACCCATCATAGCTTCTTTTCTTACTCGCCACT ...........:........:..:........x..:....:......:..............x..............x..:.....x..:..:x...................:..x.....:..x.................................. 160M 142/160 88.8% 160/94230402 0.0% 0/160 0.0% 16709285 NA +3414 chr4 + 190214555 39905777 39905776 39905911 135 GAAGAAAGGAAGGAAGATAGGGAGAGAGGCAGGGAGAAAAGGAGGGAAGAAAGCAAGGAAGAAGAAAAGGAAAGGAGGGAAGAAAAAAAGGAAAGGAGGCAGGGAGAAAGGAAGTTAGAA------------AAATTAATGATTCAA chr4 - 94230402 56098407 56098406 56098553 38131850 38131849 38131996 147 GAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGAGTCAA .........xxxx:...xxx..::.:.:.:x..:...:xx..::xxx.:.x..x.:.:.x::...:xx::....x...:.::............:.x::x....:.:..::....:.::.------------..........x.... 120M12I15M 82/135 60.7% 147/94230402 0.0% 12/135 8.9% -16192630 -78037772 +3016 chr4 + 190214555 39906873 39906872 39906945 73 TTCCTATGTAACAGGTTAGCAAAAGCCTTTTGAGATTTCTTACATAAAAAAAAAAAAAAAAAAAAAAAAAACA chr4 - 94230402 77689892 77689891 77689964 16540439 16540438 16540511 73 TTCCTAAGTAAAAGGTTTTGAAAATCTCCTGCAGTTTTACCATCTAAAAAATAGAAAAAAAAAAAAAAAGCCA ......x....x.....xxx....x.:::.xx..x...x::.:x.......x.:...............:x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -37783019 -56447383 +11026 chr4 + 190214555 39908372 39908371 39908568 197 GAATAAAATGCCTCAGATTTTACCCGTTTATCCAGTGTTCTTTCCCTTACAAAGCCAAGCAGCTGATCATTTACTAAGGCCAGGTCCCTCTTGGCAGCTGTTATTATAGTAACAATGACATCATGACGAATAGCTTCTTCTGGATCATGTGATCTAACCTTTAAATATTCTGT---AATAAGAGAAAA--AAAACTTAGGCT chr4 - 94230402 23198175 23198174 23198376 71032027 71032026 71032228 202 GAAAACAAAGTATTAACACTTACTCGTTTGTCTAGTGTTCTTTCCCTTACGAAGCCCAGCAGCTGATCATTGACTAAGGAAAGATCTCTCTTGCCCGCAGTAATAATTGTAACAATAACATCGTGTCGAATAGCTTCCTCTGGGTCATGTGACCTAACCTTCAAATATTCTGTTACAATCAGAAACAATGAAAAGTTTGGCT ...x.x..x.:x.:.:xx:....:.....:..:.................:.....x..............x.......xx..:..:......x.x..x..x..x..x........:.....:..x...........:.....:........:........:...........---...x...:.x..--....x..x.... 173M3I12M2I12M 159/197 80.7% 202/94230402 0.0% 5/197 2.5% 16710197 NA +8520 chr4 + 190214555 39910239 39910238 39910404 166 CTTACCTGTGAGATCCTTCGCTAAATCTGGGTGATTCATTAAACAATGACTGGCAAATTTCACACTTTCTAATCTCACAGGAACATGAATATCATTAAATCTACACAGA-AAAAGATTGCTAAACATTAATTGTAAGGCAAAATAATCA--CTCTCAAATCAGGTATAT chr4 - 94230402 23199066 23199065 23199224 71031179 71031178 71031337 159 CTCACCAGTGAGGTCTTTCGCTAAGTCTGGATGGTTCATTAAACAATGACTGGCGAATTTCACACTCTCTAATCTCACAGGGACATGGATATCATTGAACCTAGAGAGACAGAAGACTA-TGAATGTTAATTTT---------TAATTAGCCTTGCAAATCAAGATTAT ..:...x.....:..:........:.....:..:....................:...........:..............:.....:........:..:...x.x...-.:....:.:-.:..::......x.---------....:.--..:x.......:.xx... 109M1I9M1D14M9D6M2I18M 128/156 82.1% 159/94230402 0.0% 13/156 8.3% 16711173 NA +10528 chr4 + 190214555 39913602 39913601 39913753 152 TTCTCTTACCGTCCAAGAAAACATTGCCAAAGAGGACGATTCTGTGTTGCCAAATCAGAATCTTTGGAGCCAAACAATTTAGCTAGAAGTCGAACAACAGCTAATCGCTCTTCTCCATCATTGCTCTAAGAAGGGAAAACAGAAAGTGAAGC chr4 - 94230402 23200023 23200022 23200174 71030229 71030228 71030380 152 TTCTCCTACCGCCCAAGAAAGCACTGCCAAAGAGGACGATTTTGTGTGGCCAGATCAGAATCTTTAGAGCCAAAGAGTTTAGCCAAAAGTCGAACAACAGCCAAACGTTCTTCTCCATCATTGCTCTGAAAATCAAAAAATGAAAAAGAAAC .....:.....:........:..:.................:.....x....:............:........x.:......:.:...............:..x..:...................:.:..xx:....xx....:x...:. 152M 127/152 83.6% 152/94230402 0.0% 0/152 0.0% 16713579 NA +3461 chr4 + 190214555 39914237 39914236 39914317 81 CTGCAACCTCTGCCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGCCCACCACCG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG ..:..:..:xx:x..:.:.........x.x...x.xx.x........:..:.........:.:....--..:x......:. 67M2D12M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 21717111 NA +10593 chr4 + 190214555 39917043 39917042 39917194 152 CTTACCTTTAGTTTGAATTCAAGCTGTGGCATGACGGATAATAATAAATGAGGATCTATAGCAAAAAGTTCCTGAATCAGATCAAATACATGTTCTGACAAATCACTTACTGATGATCTTCCCAGCACCAGGACTTGATTGAAAAACTGTAA chr4 - 94230402 23201226 23201225 23201377 71029026 71029025 71029177 152 CCTACCTTCAGTTTGAATTCAAGCTGGGGCATGACAGACAGCAGTAAGTGAGGATCTATGGCAAAAAGCTCTTGTATCAAGTCAAATACATGTTCTGATAAGTCACTTACTGAAGACTTTCCCAGTACCAGAACCTGGTTAAAAAACTAGAA .:......:.................x........:..:.::.:...:...........:........:..:..x....::.................:..:...........x..::.......:.....:..:..:..:.......:x.. 152M 125/152 82.2% 152/94230402 0.0% 0/152 0.0% 16715817 NA +6774 chr4 + 190214555 39920212 39920211 39920425 214 TTTTATATTTATAAGCTAAATAAACTTTTATGTAAGAGGTTCTAATAAATTAATACAATGGATTAAGAATTACA------AAATATAGAATAAACATAGAAAGAAATACATACATTAGCAATGCATGCCTCAATAGTCTGGACTGTTCTTTTCAATAGCACTTTTGCAAGGTCAAAGGACTGTTTATTTAAGTTCTGAAAAATAATAAAAACATGGAAAG chr4 - 94230402 23202781 23202780 23202981 71027422 71027421 71027622 201 TTTTATAGGCATAATTTTAAAA------TACATAAAA--CTCCAATAAATCAAAATA-----TCAACAAGCACACTCGTTAGTTACAG--TAAACATGAATTAATTTACATACATTGGCAATGCACGGTTCAATGGTCTGGACAGTCCTTTTCAGCAGGACTTTTGCAAGATCAAATGCTTGCTTATTAAGGTTCTGGAAAA----AAAAGCAAGGGGGG .......xx:....x:.x..x.------..::...:.--:..:.......:..x.:.-----.:..x..x:...------.:x..:..--.......::.xx:.xx..........:........:.x:.....:........x..:.......::..x...........:.....x.x:..:.....x.:......:....----....:..x..:::. 22M6D9M2D18M5D12M6I8M2D112M4D14M 143/195 73.3% 201/94230402 0.0% 25/195 12.8% 16717431 NA +11482 chr4 + 190214555 39922610 39922609 39922762 153 TACTTTACAGACCTTATGTGCAGGAATGAGGTTAATAAGAATGGAGTCCAATAATTCTTGAGTAACTCCATCACCTTCCATGATGATAGAACTCATCAAATCTAGCATGTGCATTTGTACCTTCTTATTGTGGCTATTGCTATAAAAAAAAAA chr4 - 94230402 23205959 23205958 23206111 71024292 71024291 71024444 153 TACTTTGCAGACCTTGTGTGCAGGAATGAGGTTAATCAAAATGGAGTCCAGCAGCTCCTGAGTTACTCCATCGCCTTCCATGATGATAGAACTCATCAAATCCAGCATATGCATTTGTACCTTCTGGTTGTGGCTATTACTAAGAAGATAAAA ......:........:....................x.:...........::.::..:.....x........:.............................:.....:................x:...........:...x:..:.x.... 153M 133/153 86.9% 153/94230402 0.0% 0/153 0.0% 16716651 NA +10495 chr4 + 190214555 39925829 39925828 39926877 1049 AACTTACTTGATCACTGAGAAGAGAGTTCTAAAAAGCTGAATAAAAATTTCATTGCAATCTTCCAATTCAAAGCAGATGTTATATGATTTAACCCAAGCTAAATTCTTAAATAAATAAAAATAATTATTGAATTATACATATATACAGAATAGTTATATAATAAAAAACTCAGTAAAAAATTAATTTTTAGAGTTAGAAACATATTAAAGTCTATAAAGACTCAACATATAAAATTTTAAGTGTTAATCACATATTCTGACCTTGAAAAAGATATATACCTGATGGCATCAATTTTCTCAAACTGAAAAATACTCAATATTTTTAAGTTGGTAGATATA----TTTCCATACAAAA----TTTAAGAAGCAGTAAAAATCTGTTTTTAGAATAGAAAAAAATAAAAATAAAAAGATAGAGGCCGGGCCCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTCA-------------ACATGGAGAAACCCCGTCTCT--------ACTA--AAAATA---CAAAATTAGCC---------GTGCGTGGTGGTGTATGCCTGTAATCTCAGCTACTCGGGAGGCTGAGGCAGAAGAATTGC---TTGAACCTGGGAGGCGGAGGTTGTGGTGAGCTGAGATCACGCCATTGCACTCCAGTCTTGGCAACAAGAGTGAAAC--------TACGT--CTCAAAAAAAAAAAAAGAAAGAAATAGA-TACAAACAAAAGATATAGTTTCAA-----ATAATCTACAGTTTTTCCATCAGAATATACTTTATCTCTTCAGGATAGGAAGAAAAATAAAATAATATTTTCCTTATGAAATGT----------AAAAGACATTTTATTATA---GGCTTTG------------AATAAAATAAACACTC----ATTTTACATTACAAAGTTAACATGAA--GAATTTGCTATCATGTGAAATAATGTTAATAGTTATT-AAAGTTT---TTTTTTTTTTACCTCTAATAAATAAAAGTATCTATTAAACTGTGGACTCTTTGTATCCTCCAAACCTTTTAATTGTCTGGTAATAAACAAAAATATGTCCTGTTAAAAAAAAAAA chr4 - 94230402 23206589 23206588 23207552 71022851 71022850 71023814 964 AACTTACTTGATAACTGAAAAAAGAGTCCTAAAAAGCTGAATAAAAATTTCATTGCAATCTTCCAACTCAAAGCAGATGTTGTAAGATTTAACCCAAGCTAAATTCTAAAACAAAAATAGG-------------------ATATTCAGGATATT----------AAAACTTTGC---AAATCACTT-----AAGTATAATCACGTTAG----------------------------TTAATTTTTCTTC---TATTCAGA---TAAAAATATTATACA----ATAAAA--AACCCTTTGGA---GAAAGAGACTGGATATTTGC---TTTGCATATATACAGCTCTTAACACAAAGGGGCTTT-----GCAGTATACATCC----------------ACAAGAAAAATTAGAGAATA----------------------ATCTGATTTCTTAG----TTACAAAAGCAGATTGACAGAAACTGTTAACATAATAAGGTTATATCTAGACTTATTTTGGATTCATGGTATGAAACAATGCTGttttttttttttaattaataaaatattttaaaattaaaCACTTTCTAAATGCACACTGATAAAATCCC---AACATATCTTGTCCCACCGTCAATATAAGATATTTGCATTTTAAAC-----------------------------AGCATTTCATT----TTTTCTCTTTACAA-GGGAATAAAACCTTAAGGGTACATAATACaaaaaaaaaaaaaaaaaaaaaaGGACTAAAATTGTAAGATAAAGGCTAAACATTGATAAACACCAATCATTTTAACACAA------------CCTCA--ACTAGAGGCAGCATGAACTTATTAAAAACCTATGAACTTTTAACTGCTAAAAGAAGCAATTTATTGAACATTACTTTGTCTGCTATCATTTACACTATAAACACCCGTGAATGTGGCACATCAGAGGTAAGATCAATTACATTTCTTACAATCACAGAGAAAG-TAGCATCTACTGAAAGTTTCAATTATTACGTTACCTCTAACAAGTAAAAGTATCTGTTAAACTGAGGGCTCTTTGTGTCCTCCAAGCCTTTTAATTGTCTTGTAATAAACAAGAATATGTCCTGTCAGAACACAAGA ............x.....:..:.....:......................................:..............:..x......................x...:...x.x.::-------------------....x...:...x.----------......:x.:---....:.x..-----.:x..x..x..::...:----------------------------....x.x..xx..---.....x..---.:....x:x....:.----..::x.--..:::.:.x:.---....:.x...x:......x:---..x.:.x.....----.:.:x.:.....:----...-----......x.x...:----------------.x..x......x.:.::...----------------------::...xxx..::..----..:x:.::x..::x..:xx.:.x.xx:.:.x:.x.x:..x..:x:x.:..x..:.-------------::...:.:x..:x.:..:.:.--------.:..--......---:.......:x.---------:...:::x..:.:x.xx..:---.x.x:.x..xx..xx:xx.:::.x::.::.x.x....---..:...-----------------------------.x..:x:....----.::xx....x:...-::..:.:....--------...:.--:x..............:...:...x:..-..x..x::x......x..x:.x..-----....x.xx..:.:x..::.x..x..------------.:...--.:x:..:.x.:x..:..x.x..xxxxxx.:......x.x.----------..:.::..x......:x.---x:.....------------x.:.xx........:.----..x.x:..:xx..:..x...x..x..--:x....x:..:x..xxx.:.x..x.-..::.x:..:.-.......---..x..x:x..........:..:...........:........x..:........:........:..............x...........:............:.:..x.x..:. 121M19D14M10D10M3D9M5D17M28D13M3D8M3D15M4D6M2D11M3D20M3D12M4I13M4I3M5D13M16D20M22D14M4D55M13I21M8I4M2I6M3I11M9I20M3D37M3I6M29D11M4D14M1D11M8I5M2I28M1I24M5I25M12D5M2D40M10I18M3I7M12I16M4I26M2I25M1D11M1I7M3I115M 594/867 68.5% 964/94230402 0.0% 279/867 32.2% 16719240 NA +19736 chr4 + 190214555 39927887 39927886 39928200 314 ATATAAAAATAAAAGTATACCTTCTGAACAGTGGT-----GAATGAAAAATACAATAAAGTGAAAAAGGCTGTATTTACCTTAAGTTTATCATGGGAAGTATATGGAGCTTCTGGGGCATAGATACGAAAGATATCAGCCAAACAACATGCTACAAGGAGACGCACATCTTTATTGGGGTTCCTGAGGAAGAATTCAGATGCAAGATGCAAGGCTAGTGGGAGATACTGCTGTTTTTCATCTTCTGAGTCCTGATCCATATCCATAAAGGTTTTCACTACCATCTGTAAAAATGTACAAAAACACAAAATAATTAACTC chr4 - 94230402 23207757 23207756 23208065 71022338 71022337 71022646 309 ATTTAAAAAAAGAAAT-------CTGAACAATTTTTATTTGAAACAGGAGAACGAGGCAGGGAAAAAGCCATTATTTACCTTAAGTTTGTCATGGGAAGTATATGGAGCTTCAGGAGCATAGATACGAAAGATATCAGCCAAGCAACATGCTACAAGGAGGCGCACATCTTTATTGGGATTCCTGAGGAAGAATTCAGATGCAAGGTGCAAGGCTAATGGGAGATACTGCTGTTTCTCGTCTTCTGAGTCCTGGTCCATATCCATGAACGTTTTTACCACCATCTGGAAAA---TACAGGAAAAAAAAAAAAACAACTC ..x......x.:..:.-------.......:.xx.-----...xx.::.:x..:.x:x..x.......x.xx................:.......................x..:..........................:.................:.................:..........................:..........:..................:..:..............:...........:..x.....:..:........x....---....::..x.x....x..x:..... 16M7D12M5I251M3D25M 260/304 85.5% 309/94230402 0.0% 15/304 4.9% 16720130 NA +3175 chr4 + 190214555 39930205 39930204 39930288 84 GACTCCATCTCAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTGTTTTTTGTTTTTTTTTTTTAAGAGACAGGGTTT chr4 - 94230402 62760438 62760437 62760514 31469889 31469888 31469965 77 GGCTTCTTCTCATTTAAAAAAGAAAAAGAGGAAAAAAAAAAAAAGTTTTACTGTTCTATCTTTCT---------GTGATAGGGTCT .:..:.x.....x--......:.....:.::..................x:....:.x.x...:.---------.x..:.....:. 13M2I50M9D12M 58/75 77.3% 77/94230402 0.0% 11/75 14.7% -22830233 -71400169 +3447 chr4 + 190214555 39930214 39930213 39930294 81 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTGTTTTTTGTTTTTTTTTTTTAAGAGACAGGGTTTTGCCAT chr4 - 94230402 54371554 54371553 54371634 39858769 39858768 39858849 81 TCAAAAGAAAGGAAAAGAAAGTCCTCCAAATAAGATTTTTGTTTTGTTGTTTTTTTTTTTTTTCAGACAGAGCTTTCCCAT ......:...::....:...:xxxxxx...x...x.....xx...x...............xxx......:.:...x.... 81M 59/81 72.8% 81/94230402 0.0% 0/81 0.0% -14441340 -79789062 +3112 chr4 + 190214555 39930216 39930215 39930283 68 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTGTTTTTTGTTTTTTTTTTTTAAGAGACAG chr4 - 94230402 5641842 5641841 5641909 88588494 88588493 88588561 68 AAAAATAAAAAAAAAAAAGAGAAAAAGAAAGGGATCTGAGCTTATAGTTTCTTGCTTTCAAGAAAGAG .....x............:.:.....:...:.xx.:.xx.:..x.x....:..x:...:....:.x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 34288374 NA +3215 chr4 + 190214555 39930219 39930218 39930278 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTGTTTTTTGTTTTTTTTTTTTAAGA chr4 - 94230402 75587741 75587740 75587800 18642603 18642602 18642662 60 AAATATAGAAGAAAAAAAGCAGAGGAGAGTTTTTCTGTTTTTTTTTTCTTTTTTTTCAAA ...x.x.:..:.......:x.:.::.:.......:........x...:........x.:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -35657522 -58572880 +3143 chr4 + 190214555 39939802 39939801 39939856 55 AAACAAAAACAAACAAACAAAAAAACAGCTTTATTAAGGTATAGCTGAACTACTG chr4 - 94230402 17436035 17436034 17436089 76794314 76794313 76794368 55 AAATAAAAACAAACAAACAAACAAAAAGGTTAATTAGGGTGTAGCTAACATTCTG ...:.................x...x..x..x....:...:.....:.xx.x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 22503767 NA +3079 chr4 + 190214555 39943781 39943780 39943834 54 TGGGCAACAAAGCGAACCGTA-TCAAAAACAAACAAACAACAACAACAACAAAAA chr4 - 94230402 79949115 79949114 79949169 14281234 14281233 14281288 55 TGAAAAACCAAGCTTACTTTGGTCAAAAACAAACAAACAACAACAACAACAAAAA ..::x...x....xx..:x.:-................................. 21M1I33M 45/54 83.3% 55/94230402 0.0% 1/54 1.9% -40005334 -54225068 +3263 chr4 + 190214555 39943801 39943800 39943884 84 ATCAAAAACAAACAAACAACAACAACAACAAAAAGATCCATTCTACCAGACCTAAACCATTTAACAAGCACATACTACAAAATA chr4 - 94230402 14290077 14290076 14290148 79940255 79940254 79940326 72 ATAAAAAACAAACAAATAACAACAACAACAAAAAAA--------ACCAAAGCTG----ATTTAGGGAGCATTGACTACTAAACA ..x.............:.................:.--------....:.x..:----.....:x:....:xx.....x...:. 36M8D10M4D26M 58/72 80.6% 72/94230402 0.0% 12/72 16.7% 25653724 NA +3224 chr4 + 190214555 39943804 39943803 39943847 44 AAAAACAAACAAACAACAACAACAACAAAAAGATCCATTCTACC chr4 - 94230402 20770550 20770549 20770593 73459810 73459809 73459853 44 AGAAACAAACAAACAACAACAACAACAAAAAAATGCCTTCTTCC .:.............................:..x.x....x.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 19173254 NA +3258 chr4 + 190214555 39946211 39946210 39946255 45 AAAAAAAAAAAAGAAAGAAAAAAAAAGGAAAGGAAAAGAGATTCA chr4 - 94230402 18165649 18165648 18165693 76064710 76064709 76064754 45 AAAAAAAAAAAAGAGGGAAAAAAAAAGGAAAGGAAAGGCCACTCA ..............::....................:.xx.:... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 21780562 NA +3069 chr4 + 190214555 39967912 39967911 39967950 39 ATCTTAAAAACAAACAAACAAACAAACAAAAAAAACACC chr4 - 94230402 68812217 68812216 68812255 25418148 25418147 25418186 39 ATGCTAAAAAAAAACAAACAAACAAACAAAAAAAACACC ..x:......x............................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -28844305 -65386097 +3018 chr4 + 190214555 39971122 39971121 39971185 64 TTCCTTTGTAATTGCCTTTAAGATGTTTTTTGTTTTGTTTTGTTTGTTTGTTTTCGAGACAGAG chr4 - 94230402 29454590 29454589 29454653 64775750 64775749 64775813 64 TTCCTTTTTAGGTACATGACAAAAGTTTTCTATTTTTTTTTGTTTGTTTGTTTTTAAAATAAAG .......x..:x.:.x.xxx.:.x.....:.:....x.................::.:.:.:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 10516532 NA +14063 chr4 + 190214555 39976435 39976434 39977068 634 CTTACCTTCAGGCGTTTGATCATCTCGTCCGTGGTGATCTTGTCGGTGATCTCTTTTACCCCCGGAGGGTAA---GCGATCTTCCCGTCGGCACTCACGACGCCACAGAGGGCAGTGGCAGGCTTGGGCTGCGCGGT---GAAGTCCATCCTGGGG---------GACAACTTT--TGGTTCACAGTCCTCTACCGGCCTCTATCGGTCAGAAAACCAAAGTTCAGCGGGAAAGGGGCGACTTTGTAA-CCTCTTTTTTCATTTCAAATCTCTCTAATCTGGAAAAGGCCCTGTCTCCCCAGAGGCCG---GGGACCCGGCAGCGGCCTCGCCACCCGCTCTTTCCCAGGGATCGA-------ACCCCGCCG-GCCCCGCCAACCCGGCCCTGCCAGCCCCAGGC--------------TCACGGGGCTCCTCCGCACCAGCCGCCGTGGCCGCCGAACAGCGCCAGGAGTTTCCCATTCCGCCTTTCACAATGAAA-TCCACCCCCGA--GCACCAGGGTCCGAAGTTTGGCGGCCCCGGGAGGCCGGCAAGGACCCCAAGGCC------CCCGCTCGGCGGTGGGG-AAGCACCCAGTCCCGCCCGGCCAGTCCCCTCCGGGAAACCAGACCCGAGGCCTATAGGGCTCGGCTTAGGCCGCAAAACTA--GGGACCCAGCGGACCCA chr4 - 94230402 23236652 23236651 23237276 70993127 70993126 70993751 625 CCTACCTTTAACCGTTTCACCACCTCATCGTTGGTAATTTTGTCGGTGATCTCCTTCACTCCGGGCGGGTAGTAGATGATTTTACCATCGGC------------------------GGCGGGTTTTGGTTGGGCAGCCGGGAAGTCCATCCTGGTGCCGCTGCTCAAAAACTTTCCTTCTGCACAGTCCTCTACCGGCCTCTATCGGTCAGAAAACAAAAGTTCAGCGGAATGGCACCGACTTTCTAACCCTCTTTTTCCATTTCGAA--CCCTCAATTCGCAGAAGgccccggcccccgccgcgccgcccgagcccccgccgccgcccggccgcatcccgccgtcccgaggccgggcccgccgccccgccgccccccgccgccccggcccctccgctccccgccgccgcctccTTTCATCGCGGGGCCGCTCCAGCCCAACACCGATAGTTG-------------GGAGCTGCCGA-------TTTTACAATGAAATTTCGGCCCCGATCGAAGGATgccccggcccccggggacggcgggcggctgaggcggggcgcggggccgcgatgcccggcccgcggggggTCGAGGAGCCGGCACGGCGGCGC------------GGAGCCGGGAGCCGAGGCCTAAACAG------TTAGGCCTCAAAACTATCGGGAGGCAGAGGAACCA .:......:.:x.....x.:..:...:..xx....:..:..............:..:..:..x..x.....:---::...:..x..:.....------------------------...:..:..x..:..x..:.:---..............x.---------:.x......--.xx.x...................................x............:.x:.x:x.......x...-.........:......:..--:.:::...::.x.:.......:.x.:...xxx:x....---.:.x...x..x..x...:x...:.x:x.:x::x:..x.:.::..:-------:........-x.......:x........:x..:x:...x.x.--------------..:......:x....:xx...:.xx.x:.:.::.-------------....:.x..x.-------...:.........-.:.:x......--.x.xx.x.x:...:xx:::..x.:.xx....x...:.:x:x..:x.x.::....------....x:.x....x...x-:..x.x..:.:x.x..xxx..------------...:x.x:..x..........x.x:.------.......x........--....xx...x...x... 72M3I17M24D21M3I16M9I9M2I72M1I19M2D38M3I45M7I9M1I32M14I34M13D11M7D13M1I11M2I54M6I17M1I21M12D26M6D16M2I17M 399/570 70.0% 625/94230402 0.0% 119/570 20.9% 16739783 NA +5154 chr4 + 190214555 39977562 39977561 39978037 476 GCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGGAGCGGCGCTGGGGCTGGCGGTGCC---------GAGGAGGAGCAGCC-----GCCGCGGGGGGAGACGCGGGG---------------CGAGTGAGCGCTGGGCGGGGAGACAGTGCCGCTCTCCGTCTGGCCGAGGAAGAGCAGCCTCGAAGGCTCCTCCGGGAGTGTGTGCGCTTGTGTCCGTCCGGGACCCCCGCGGCCCGCCCGCACGCACCTCGCGCCGGCCCGGACCGCCGACTCGGACCCGGACGC----CCCTCGCAGAGGCGCG-CGCCCGGCCGTCCGTGCCCCGGGAGCCGGGGCCTCGCGCACACACCGGCCGGTCACGCGAGCGGCGCG-AGAGCACGCGAGAGCAGCGCGCGCTCCTCGCTCCCTCCCCTTCCTCCGC--------CGGCCGTGCATCCGCCTCCCTCGGGCCCGAGGCGGCCGCGCGCAGGGC----GGACAGCGCCGCCACCCGGTTGGCGCCAATACCTGCCG chr4 - 94230402 23238117 23238116 23238575 70991828 70991827 70992286 459 GCCACGACAGCTCCCGCCGC--ATCCTCACATAAGCGGCGGTGCGGC-GGCTATGCTCGGAAGGGGGAGGGGGAGCTGCTCGGTGGCGGCGGCGGCAGCAGCGGAGAGGGGGAGGCTCCGCCGAGCGCGCGCCG--CGGGGACACAGTTCCGCTCTCCGTCCGGCCGGGGAAGAACAACCGGGA-----------GGAGGCTACGC-----------TCCGCG--CCGCGCCGCCCCCTCCTTCTCTCCTCCCTTCCTCCT---CCCTCCGCCCGCGCCCGGACCCGCAGCTTCCGCCCAGGCGGGACGCC------TCCGGACCC---GAGTCGGGGTGAGGC-----CGCCAGTAAGTCGCG-GAGCCGCCCGCGGGGCACG-GTGTGGGGCGCGGCCGCCTCAGCGCTGCTTCACGCTTGGCGCCAAAAgcggcggagcg--------ccgcgggcccggggctg--------agggctgaggggccgcggcctctcgcgggcggggccggccgcTGCCG ...:.x:.x..:x.......--::..x.x.:x:.......x..x...-...x:...:---------....:.....x..:-----..x....x..x..xx....:.---------------....:.x....:.--......x.....x............:.....:......:..:..xx..-----------....xx.::..-----------....x.--..x...x....x.:.x:x.x.x....x.x:.xx..:---..x:.x:.:..x:.......x.----.:::...xx.....x.-....------....x:...---...:.....:xxx..-----.:..:.:x:...:..-....x..x..-:.:.....-.x.x.x:.....xx.x....:x:x.:x.::.x:x..:x..--------....x.x..:--------..x........:...x.--------.....----..:.x...x.x:.x.x...x:..x...:::xx...... 20M2D25M1D9M9I14M5I21M15I13M2D48M11D11M11D6M2D36M3D22M4I16M1I4M6D9M3D15M5D15M1D10M1I8M1D40M8I10M8D17M8D5M4I38M 282/412 68.4% 459/94230402 0.0% 111/412 26.9% 16739445 NA +3165 chr4 + 190214555 39994473 39994472 39994532 60 GAAAAAACAACAACAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAAG chr4 - 94230402 37322379 37322378 37322438 56907965 56907964 56908024 60 GAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAG .....:x.xx::x......:..............:...:::......x.:..:.:..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 2672094 NA +3053 chr4 + 190214555 39994483 39994482 39994533 51 CAACAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAAGC chr4 - 94230402 68752766 68752765 68752816 25477587 25477586 25477637 51 CAACAAGGAGGAGTAAGGAGAGAAAAGAAGAAGAGGGAGAAGAAAGAAAAC ......::.::.:x..::.:.:............:.:............:. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% -28758283 -65472119 +3148 chr4 + 190214555 39994491 39994490 39994549 59 AAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAAGCTATTACTCATAAGAAA chr4 - 94230402 72272497 72272496 72272555 21957848 21957847 21957906 59 AAACATGAAAAAGGAAAGGGAGAGGAAGATAAAGGAAGAAAACTGTTACTTCCAAGAAA ...x.x:.....::...:.:...:.....x:...:......:..:.....:x:...... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -32278006 -61952396 +3042 chr4 + 190214555 39997580 39997579 39997637 58 ATATTTATTAGTTGCCCACTATATTTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 21406206 21406205 21406263 72824140 72824139 72824197 58 ATTTTTCTTTAATATTCACTGTATTTTCTTGCTTTTCTTTTTCTTTTTTTCTTCTTTT ..x...x..x:x.:::....:.........x:.........::.......:..:.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 18591374 NA +3061 chr4 + 190214555 40012892 40012891 40012986 95 ACTGTACTCCAGCCTGGGCGACTGAGCAAGACCTCA----TCTCAAAAAACAAAAAACAAAACAAAACAAAACAAAACAAATCAAAGAAAACTAGGAAT chr4 - 94230402 22986993 22986992 22987084 71243319 71243318 71243410 92 ACTATACTTAAG-------GGCTGAAAAAAATATTACTGGTATCAAAAAAAAAAAAAAAAAACAAATTAAAGCAGAATAGTTTAAAAAATACTTGAAAT ...:....:x..-------.:....:x..:.:x.:.----.x........x......x........x:...:..:..:.:x.:...:..x...x.:... 12M7D17M4I59M 63/88 71.6% 92/94230402 0.0% 11/88 12.5% 17025899 NA +3055 chr4 + 190214555 40016375 40016374 40016422 48 AAGGAAACTCTATCTCAAAAAAAAAAAAGAAAAAAGAAAAGGAAAAGT chr4 - 94230402 71886267 71886266 71886314 22344089 22344088 22344136 48 AAGGAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAAT .....:x:.....x...:.........::.............x...:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -31869892 -62360510 +3105 chr4 + 190214555 40019567 40019566 40019616 50 CTCTGTCCAAAAAAAAAAAAAAAAAAGAGAGAGGGAGAGAAATCTATTTC chr4 - 94230402 83909874 83909873 83909923 10320480 10320479 10320529 50 CTCTGTCAAAAAAAAAAAAAAAAAAAGGGAGGCCTGGTGAAATCCATTTC .......x...................:...:xxx:.x......:..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -43890307 -50340095 +3381 chr4 + 190214555 40030380 40030379 40030448 69 AGCGAGACGCCATCTCAAAAAAGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATAT chr4 - 94230402 47152891 47152890 47152959 47077444 47077443 47077512 69 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATAT ..x.:...:.xx.x:.......:......:....xx.:...x:x...:x............:....... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -7122511 -87107891 +3329 chr4 + 190214555 40032823 40032822 40032887 65 ATACAAATGTCTATACACGTGTATATACACACACATGTATACACACACGTGTATACACACACGTG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGC--ATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG .....:...:--.....x:.............:..........x...::.::x...:...:.::. 10M2D53M 48/63 76.2% 63/94230402 0.0% 2/63 3.2% 32436410 NA +3053 chr4 + 190214555 40032853 40032852 40032903 51 ACACATGTATACACACACGTGTATACACACACGTGTATACACACACGTGTA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ...:...........x..:.....:.......:.::....x....x:.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 11562486 NA +3073 chr4 + 190214555 40032924 40032923 40032985 62 CGTGTATATATATACAAATGTGTATACACACGTGTATATATATACAAATGTGTATACACGTA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .:.::.x..::..........:..........::.:....:.x...x..::x..::....:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 32436512 NA +3149 chr4 + 190214555 40032965 40032964 40033032 68 ATACAAATGTGTATACACGTATATATACACACGTGTATACACGTATATATACACACGTGTATACACGT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....:...::..:.x.:.......:....:.:........x::.....:x:..:.::.:.::.x.:. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 32436552 NA +3174 chr4 + 190214555 40033102 40033101 40033162 61 TATACACGTGTGTATACACGTGTGTATACACACATGTGTATATATATATACTTTTTTTTTT chr4 - 94230402 35241750 35241749 35241810 58988593 58988592 58988653 61 TATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTT ....x.:.:x.:.xx.x..:...x....:...::................x...:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 4791352 NA +3017 chr4 + 190214555 40038180 40038179 40038213 34 TAAAAAGTTTTTTGTTTTTTTTTTTCAAGGAGAA chr4 - 94230402 20057899 20057898 20057932 74172471 74172470 74172504 34 TAAAAAGTTTTTTGTTTTTTTTTTTCAAGGAAAA ...............................:.. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 19980281 NA +3114 chr4 + 190214555 40039668 40039667 40039756 89 ATCCTGGAGGGAGTGGGAGTCCTGGAGGTCTAGGCTGCAGTGACCCTGTCTCCATCAAAAAAAAAAAAAAGGAGAGAGAGAGAGAGAAA chr4 - 94230402 2114412 2114411 2114500 92115903 92115902 92115991 89 ATTCAAGAGAAGGAGAGGGCACTGGAAAAGAAAACAACACACACCCGATTTCATTCAAGAGAGAAAAAAAAAAGAGAGAGAGAGAGAAA ..:.x:...:::.x.:.:.:x.....::xxx.::.x:..xxx....x:.:..xx....:.:.:.......::................. 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 37925256 NA +3347 chr4 + 190214555 40039702 40039701 40039760 59 CTGCAGTGACCCTGTCTCCATCAAAAAAAAAAAAAAGGAGAGAGAGAGAGAGAAAAGAA chr4 - 94230402 87676329 87676328 87676383 6554020 6554019 6554074 55 CTTCAGTG----TATTCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAA ..x.....----.:.::.:.:...............:................:..x.. 8M4D47M 46/55 83.6% 55/94230402 0.0% 4/55 7.3% -47636627 -46593775 +3044 chr4 + 190214555 40054575 40054574 40054639 65 AGTCACCGCCCCCCCGCCGCCCCAAAAAAAAAAGAAATTTAAAGGGACATGAACTTCAATGAGAA chr4 - 94230402 59404618 59404617 59404682 34825721 34825720 34825785 65 AATTGCCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAA .:.::..x...:...x..x..............:...xxx...::....::..x.x..:.:.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -19350043 -74880359 +5008 chr4 + 190214555 40056814 40056813 40057054 241 GCGCGGCTGCTCTTCCCCGGCCGGACGGAGAGCGGCAGTGTCTCCCCGCCGGGCGCGCTCGCCGT-GTCTCCCCCGCGGCCGCAGCTGCTTGCTAGCCTTGC-------GCGGC--------GCGGGAGAGCGCAGTGGCGCCGGCGGGAAAGGGCTGCGGACCTGCGGCGCCGCGTTGTGCGTTCGACGACGCGGCACCGGCTTCGACGCCCTCTGCCCGCTCCAGA---AGCA-------------GGTAAAGGCGGCGGGTGGGAGGCAG chr4 - 94230402 23254773 23254772 23255030 70975373 70975372 70975630 258 gcggtgcTGTTTTTCCTCGGCCGGACGGAGAGCGGCACTGTGTCCCCGC--GGCGAGCTCCGCGCAGCCTCCCCCACTCCTGCCGCCGCCGAGCAGCTCCCCCGTCCCAGCGGCCGGCAGAAGCGAGCGAGCCGAGCGGCG--GGAGGTAAAGGCCGGTGGG-GTCCGGCGCGAAGCGGTGAGGCTGGGGAGGAG----------CCTCGCCCTCCCCCTGCTCCCGATAGGGCAGGGCTCCTGAAATGGCGGAGGCCGCCGGCGGGCAGCGG ...xx....:.:....:....................x...x.......--....x....xx..:-.:.......:.xx.:..x..:..:x:x:...:::x.-------.....--------...:.x....xx..:....--..x..x.....x.x.:..:-x.x......x:x.:x...x.x::.:x..x.x.----------.xx.......:x..:.....x..---:...-------------..:::....x..x..:...x:..:. 49M2D14M1I36M7I5M8I19M2D19M1D32M10D23M3I4M13I25M 157/226 69.5% 258/94230402 0.0% 47/226 20.8% 16802041 NA +3489 chr4 + 190214555 40064019 40064018 40064088 70 AACTCCTGAGCTCAAGTGATCCTCCTGCTTCAGCCTCCCAAGGTGCTGGGACCACATGTGAACCACTATG chr4 - 94230402 18197137 18197136 18197206 76033197 76033196 76033266 70 AGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG .:..:...:.:.......x.:.x.xx.x:.......::....xx.....:..:...:...x......:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 21866882 NA +3017 chr4 + 190214555 40078105 40078104 40078176 72 ATTTCTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATTTATTATTATTATTTTTT chr4 - 94230402 89300918 89300917 89300989 4929414 4929413 4929485 72 ATTGCTGAGACTGTGTGATGGTGTGTTTGTGCGTGTGTGTGCATATGGGTGTTTTGAGTGGTTTCATTTCTT ...x..:.:xx......xxx......x....:.........::....x....x..x.x.:x.x.:....:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -49222813 -45007589 +3000 chr4 + 190214555 40080313 40080312 40080367 55 TATATATATATATACACACACACATATATATGTATATATATAATTTTTTTTTTTT chr4 - 94230402 33661790 33661789 33661844 60568559 60568558 60568613 55 TATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT ....:.:...:.:.......x.x.............xx:.:x:.....:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 6418523 NA +3014 chr4 + 190214555 40083108 40083107 40083168 61 GGGCGGTGCAGACATAGAAAAAGGAAAAAACAAAAGGAAAAAAAGAAAAACAAACCCAAAA chr4 - 94230402 16696999 16696998 16697059 77533344 77533343 77533404 61 GAGTTGAGCAAGCAAAGAAAAAGGAGCAAAGAAAGGGAAAAAAAAAAAGAATAAACCAAAA .:.:x.x...::..x..........:x...x...:.........:...:.xx..x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 23386109 NA +3074 chr4 + 190214555 40083120 40083119 40083168 49 CATAGAAAAAGGAAAAAACAAAAGGAAAAAAAGAAAAACAAACCCAAAA chr4 - 94230402 91489908 91489907 91489956 2740447 2740446 2740495 49 CATAGAAATAGAAAAAAATAAATAGAGCAAAAAAAAAAAAAACCCAAAA ........x..:......:...x:..:x....:.....x.......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -51406788 -42823614 +3017 chr4 + 190214555 40091989 40091988 40092027 39 AAAAAAAAAAAAAAAAAAATTATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........x:................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -29345750 -64884652 +10624 chr4 + 190214555 40102044 40102043 40103221 1178 TGTTGTTGTTATTATTCTTGTTGTTGTACAGTTGAAAATGCTATGGATTGTCTATTAGAATTATCTGCCACTGATACCAAGATAGAAGAATCATCTTCACAAAGTTTCG-------------------------TTGCTTCTGAGAACCAAGTAGGTGCAGCAGAAAGTAAAATAATGGAAAAACGTCCTGAAGAAGAGAGT---------GAAGATTCAAAAATGGATTCATTTTTGGACATGCAGCTAACTGAAGACCTGGATTCCTTAATACAGAATGCTTTTGAGAAATTGAACTCTTCTCCTGATGACCAAGTATACTCATTTT-----TGCCTTCACAAGATGT-----TAATAGTTTTAATGACTCAAGTGAGTTTATAAATCCTGATTCAAGTAAT-ATGACTCCCATTTTTTCTACACAAAATATGAATTTGAACGGTGAAAATTTAGAGAATTCTGGTTCT--ACTTTAAGTT-------------------TAAACCCATTACCTTCA-CATTCAGTTTTGAACGAGTCCAAG-------TGTTTTATAAAGGATAACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCTCTTCTCAGTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAGGTTGTAGCAGTCTCAATCAAAAACAGAAAGAACTTTTAGA--ATCTGAGTGCG--------TTGAGGCTCAATTCTCTGAAGCTCCTGTAGATTTGGA--------TGCCAGTGAACCT------CAG-GCTTGTTTAAACCTTCCAGGGCTTGATT---TACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGTCTCTGATGTGTTTCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACT---GCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTACTTGCTCCTCTCCCATTGCTGTTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCACAGCTGCACACTGGAGATCTGTC---AACTA---------------------CACATTTCCACCCTCAGTTATTTCTCACACTT------------CCCCAACAAAAGTATGGAGAAATAAAGATGGAA---------CAAGTGCTTATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTAAGAAAGAAGA--CATCTTACGTTGGACTAGTTCTTGTTCTTCTCAGAGGTCTTCCGGGATCTGGAAAATCTTTTTTGGCAAGGTA chr4 - 94230402 23268704 23268703 23269950 70960453 70960452 70961699 1247 TGTGGTTAATTTTGTTAATGTTATTCAACAGTAGAAAATGCTATGGATTATCTGTTAGAGCTGTC---CACTCATGCTGA---AGAAGCAGCATCTTCA-AAAGTCTCAGATTTTGAATCAGTGGCGTCGTCACTAGCTCTTGTTAATCAGCGGAGATCTGTTCCAAATCAAAGAATGTGGGAAAGTACTGCAAAACGCTGTAATTCTGAAGAAGAAAAAGAAAAGGTCTTATCACCTGACACACTGCTGACTGAAGAACTGGATTCCTTAATAGAAAATGCTTTTCAGAGATGCAGCT-------TGAGTGACAAATTGGCTAATTCTGCAAATGACCAAATCGTATGTGAACGTGATGGCTTTAAGGAATTTCCGGAGTGGGAAGAATCACATTTGGGTCGCGATG--TTCTACTTTCTCCACAGCAAATAGCGAC--AAATAATGAGGTTTTGGAAAACTGCTGTTCTCAACTACCAGTGAGTCAGCTGAACATCCAGACAAGCTCACCAGCTGCATCGGACACTTTTGCACAAGCATTAGGAGATTCTGATTTGTCAAAAATA-CATGTTCACCATGATA--TAGCT--TCAGAAG-----CCTATAAACAATC----AAATGGAG-AAATGTCA-----------TGTGGAAATTCTGATCAGGCACAGCATACTGTTTCAGATCATAAAAGTGCAACTACTGCTTCTGGCGAATCTTCCCAAAGGACTCTGGAACTTGGAGTAGCTATCGCTGAAGAACCTAATTCACAGTGCCTGC---AACAGCACAGAGAGTTAATGACTGCCTGTTACAG-------CCACAACGCTTCTC---TTCCAGAAGCCTACGTCTCTCTTGAAAAATCCAGTCTCAAAACACCAAAACCTAAGGATTTTCAGCAATCTGAGCAGA---------GTTATAGCTTAAATCTTTCTACACCATCATGTCGG------ACTCAACAACAT---------TGGAACCTTATGGCTCCTGCATTTTATCCATCCAGTGGAAGTCACAGCTTTGTAACTCCAGTGGCTGTCAGTCCAGGACAGTGGAGACCTGTTTCAGACTATAGGACATTGGAAACAGGACTCGTTTTTTCTTCTCCAGTGGTTCCAAATGCCTGGGATAGCAGCCCTTCTCTGAAGGTATGGGAAAATCAAGATAGAAACTCAAAATTGAACCTCTCGCAAGCACAGCAGCCACCTGTTTGTCACATGATGAGAAAAAAGATGCACCTTA--TAGGTCAAGTACTTGTTCTTCTCAGAGGTGTTCCGGGATCAGGAAAATCATATTTGGCAAGGTA ...x...:x.x..:..xx....:..xx.....x................:...:.....::.:..---....x..:.::.---.....x.x........-.....:..:-------------------------.x...::..xx..:..:xx::.xx.x.:xxx..:.x...x....x:::..x..x...x.:..x:xx..---------.....xxx.:...x..x:.:..:x::x....::.x...:........x...............x.:.........x...:..xx.:..-------...xx:x...:.xx:..x...:.-----..x.:xx.:x:x....-----.:..:.:.....x..x.:xxxx....xx:x.:.x:.xx...:::..x::-...--.:.:.:...:..:...xx.....xx:.:--:..:::...::x...:..:..:.x:x.....--...x:x...x-------------------:..:.:..::.x..x..-.:xx..x.....x..:..:x:x..-------..x...:.x..::...-..::..x:.:x..:x.--..:..--:.:....-----.:.x.x.::.:.:----.....x..-..:..x.x-----------...:.x.:.::::....::x....x.x:xxx...:...--..xx:.....:--------..xx...xx.x:.::.::...xx.::xx::.:.....--------:..:::x......------...-..:..:---...xx:x...:.xx.x.x.---.:..x.x.....-------:..x..xx..x...---.::.x..x.:x.x:x.x:..:::...:::.:..:::....:x...xx....x.xxx..x:.---..x.x..:..x:..---------....:x..::::xx...x..x.x.:x:...xx.x.------x...x:.x..x.---------.....:.:x...::......x...x.:.:x.:.x:x....::..::........:....x..x.:x::..xxx.x.x...x......:....:---:....---------------------.::x...:.x:.::....x:..:.xx.::.:.------------.::.xx::..:......::....x.....:...---------::.::x::.xx....:...:x.:x.x..x....x...x:.x:.:.....:....--..:....--.x..x.x...x..................x..........x........x.x............ 65M3D12M3D16M1D9M25I68M9I88M7D23M5I16M5I49M1I3M2D28M2D31M2I10M19I17M1I24M7I16M1D16M2D5M2D7M5D13M4D8M1D8M11D38M2I11M8I37M8I13M6I3M1I6M3D19M3I12M7D14M3D61M3I14M9D35M6D12M9D93M3I5M21I32M12I33M9I54M2I7M2D64M 683/1095 62.4% 1247/94230402 0.0% 235/1095 21.5% 16833340 NA +3744 chr4 + 190214555 40106392 40106391 40106465 74 CTGTAACCTAAACCCCCTGGGTTCAAGTGATCCTCTCAACTTAGCTTCCCAAGCAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::.:..:...x.::.............x.:.x.xx::..:...:.::....:......:....:.x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 21909266 NA +9069 chr4 + 190214555 40106859 40106858 40107039 181 GAAGAAAAGGTAATGAAAATTATTTCAT---TTATCTTTCACAGGACTTTGCAAGAGGATAATCCAAGTGGAGTCATTCTTAGTACTGATGATTATTTTTATATAAATGGACAGTACCAGTTTGATGTAAAGTACTTAGGAGAAGCACATGAATGGAACCAGAATCGTGGTAAGA-ACAGATAAT chr4 - 94230402 23270809 23270808 23270992 70959411 70959410 70959594 184 GGAGGAGAGGGAA-GAAAACTACTTACTGCTTCATCTTTCACAGGATGATACTGGAGGATAACCCAAGTGGAGTTATTCTTAGTACTGATGACTACTTTTATAAATGTGGAAAATACCGTTATGATGCAGATTGCTTAGGGGAAGCACACGACTGGAACAGGAAACGAGGTGAGAGATAAATAAT .:..:.:...x..-.....:..:..xx.---.:.............:xx.:.x:........:...........:.................:..:.......x.x:....x.:....:x.x.....:.:.x.:......:........:..x......x:...x..x...:...-.:.:..... 13M1D14M3I144M1I9M 139/180 77.2% 184/94230402 0.0% 5/180 2.8% 16836050 NA +7679 chr4 + 190214555 40112059 40112058 40112191 133 TTTTTAATTATGT-TATGTTTTTCAGCAAAAGAAGCATTTGAGAAGAAGATATCTCCTATAATTATAGATAATACAAACCTACAGGCATGGGAAATGAAACCATATGTTGCTTTGGTTAGTACCATAAGTTGTC chr4 - 94230402 23272126 23272125 23272259 70958144 70958143 70958277 134 TTTTTTTGTACGTGTGTGTCTTTCAGCCAAAGAAGCATTTGAAATGAAAATCTCTCCTATAATCATAGACAACACAAACATACAAGCGTGGGAGATGAAGCCTTATGTTACTCTGGTTAGTACTGTGATTGATC .....xxx..:..-.:...:.......x..............:.x...:..x...........:.....:..:......x....:..:.....:.....:..x......:..:..........::.:.x.x:.. 13M1I120M 105/133 78.9% 134/94230402 0.0% 1/133 0.8% 16839933 NA +6426 chr4 + 190214555 40113411 40113410 40113522 112 TTTTGTCTTTGTTGTATGTAGTCTCAGAAACACAAATATAAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGGTAAAACTTGGAGG chr4 - 94230402 23273070 23273069 23273181 70957222 70957221 70957333 112 TTTTATATCTCTTTTATTCAGGCTCAGCAGTTCAAATACAAAGTCATGTTTCGAGAGCCAGACACATGGTGGAAGTTTAAACCAAAAGAACTTGAAAGGTAAGAATGTAAGG ....:.x.:.x..x...x:..x.....x.::x......:......x.x.....:..:.............................:.......x.......:.x.xx:... 112M 88/112 78.6% 112/94230402 0.0% 0/112 0.0% 16840341 NA +6179 chr4 + 190214555 40117778 40117777 40118026 249 ATATATTATTGTTTTCCTAGACATATGTTCTGATTT-------TTAAAAACTTAATTATCAATATTCCTTCAACCCTTTTTTCCCCTGGAATTTTCAGGCGTAACATTCATGGGGTAAGCAAAGAAAAAATAACAAGAATGTTGGAACATTATCAACGTTTTGTTTCAGTGCCAA--TAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGTGCATATTCTTGTGAGGATAGAAGCACTAGGT chr4 - 94230402 23274344 23274343 23274591 70955812 70955811 70956059 248 ACAGATTATTCCCTTCTTTTA-GTCTATTCTGATCTACAACTATGAAATGTTTCTTTTTCATTGTTTATTTA----TTTTTTTTC---AAATCCACAGGCGGAATGTACATGGGGTATCTAAAGAAAAGATAAAGAGAATGTTGGAGCAGTATGAACG--TTGCCTTACTGTTAACTCGATCTTGGATTCTTCTGTCCCAGAAAAATCAGAAGTTGCTGCTTGGGATGAGGATCCTTGTCAGGAGGAAAGCCATAGGT .:.x......x::...:.xx.-:.x.:.......:.-------.x...x::..xx..x...x.:..:x..:.----......::.---:...::x......x..::.x.........xx:........:....x:...........:..x...x....--...::.:.x..::..--::..:x..::......x..:.....:...x:x...xx.::..xx.x.x:..x:x..:.....x....x::....xx..... 21M1D14M7I29M4D9M3D70M2D15M2I81M 159/239 66.5% 248/94230402 0.0% 19/239 7.9% 16843434 NA +19803 chr4 + 190214555 40120424 40120423 40122315 1892 AAGCAAATCGACTTTGGAAAAGTTCCCAAGACATGAGCTATCAAATTTTGTTGGTGACTGGCCAGTTGATAAGACTATTGGTCAGAGGACAAAAAGGAACAGAAAAACTGAAAAAACTTCATCCGTACAAAGCGACAAAAAGTATAATTACCCTCAGTCA----CACAAATTAGTTAACAGTGTATCTGTGAATACAGATTGTGTCCAGCAACGAGGATCTCCACA----TGAAAGTGTAGAGGATGGCAGAAAGTCACAGTGTGATGATGCTTCAGAGCCACTCAATAGCTATAAATATGATGCTTATAAAAATATTGACAAAAACTCATTCAACATTATGGGTGACTGGCCTTCATCTGATTCTTTAGCTCAGAGGGAACACAGATCAAG---AATGCCAAAGACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAACA--AATGACAAAATGAAT-GAAATATCCTTATCTACAGCACATGAGGCCTGTTGGGGCAC----AAGCTCTCAAAAACTAAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTGAAATGCTGCTCAGTGAAATGACCTGTGAGAGTCAGACTTGTCTAAGTAAAAAGAGTCATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTTTCTGGAGTAGTAGAACCACAAACGTTAGCTGAATGTCAAGAGCAAATGCCTAAGAGAGACCCTGGAAAAGAAGTAGGCATGTGCACCCAGACTGAACCACAGGATTTTGCTCTTTTATGGAAAATAGAAAAGAATAAAATTAGCATTTCAGATTCTATCAAAGTATTAACAGGAAGATTAGATGGATTTAAGCCGAAAGTTTTCAATATTAACACAAAATCAGACGTTCAAGAAGCAATTCCATATAGAGTAATGTATGATAAAAGCACGTTTGTTGAAGAAAGTGAGCTTACCAGTGCAGATGAATCTGAAAATCTTAACATTCTTTGTAAACTGTTTGGATCCTTTTCATTAGAAGCCCTGAAAGACTTATATGAGAGGTGCAATAAAGATATTATTTGGGCCACAAGCCTTTTGTTGGATTCTGAAACTAAGTTATGTGAGGATACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGGATCACAAATTGGGCCTTTTTCTCTGGGGTTGAATTTGAAAGAAATTATTAGCCA-AAGAGGAACTTTAGAGAATTCTAATTCTCCTGTGCCAGAGTTTAGCCATGGGATTGGTATTAGTAACGCTGACTCACAGTCTACTTGTGATGCAGAAAGAGGAAACTCAG-----AGCA-GGCGGAAATGAGAGCTGTCAC---------------TCCTGAAAACCATGAATCGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTCTAAAGAATAATAATGACATACTTCCTAACAGCCAGGAAG--AACTT----TTATATAGCAGTAAGCAGTCCTTTCCAGGTATTC------TAAAAGCTACTACTCCTAAAGATATGAGTGAAACAGAAAAAAACCTAGTAGTCACAGAGACTGGAGACAACATACATTCTCCTTCACATTTCTCTGATATTTTTAACTTTGTATCTAGTACTTCAAATCTTGAATTAAATGAAGAAATTTATTTTACTGATTCTCTTGAAATAAA----GAGAAATGAAAATTTTCCAAAGGATT--------------ATGTGAAATTTTCAGATGAAGAAGAATTTATGAATGAAGATGA-------------GAAGGAAATGAAGGAAATTC---------TAATGGCA-----GGAAGTAGTTTATCAGCTGGAGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGGCTTTTCAACTTAATGAATTATTTGGTCCTGTTGGTATTGATTCAGGTAAGG chr4 - 94230402 23276157 23276156 23277997 70952406 70952405 70954246 1841 AAGCAGCTCAACTATGGAGGCATCAGGAAAACCAGAGCTGCTGAACTTCCTGGGTGACTGGCCTGTACAACAAACAATGGGACAGAGAGTCAAAAGAACTAGAAGGCTAGACAGATCTTC---CCTGAAGAGTGACAGGGAAGGTAAA-ACTCCTAGTCAGCTTCCTGAGTTAGGTAA-------------AGAGCAAGCTG-GTCTACCC-----GATACCTGTACCATTGTAAATGGCCAGGAGGG-AGAAAAT-------------------ACAACCTCT----AGTTGTTTCTCTGTTAGTTCAGATAAAGTTGTGCCAGACCTGC---AGATGGTGGGACATTGGCCAGTATCG------TTAGAACAGCGACAACAAAGGTCAAGGAGAATGAGAAAGACGAGTCTAAGTCAGTCTGA--TGAAGGTAGAAACACTGAAGGTGATATTAATAGAAGTGCTCTTGAC-ACTGTGGATG-TGCTTCGTGGAACACCTGTGGACACTGTAGAAC--AGGATGTGAAGGAGTTGCATTTTCCCCAAC-CTGAAATGGTAGGTAGTGAAACAGTCGCTAAGAAAAAAACCCAGCAAAATAAGCGAACAAGGAAACATCACAAAT---TAGCCCTCACTTTTACAAACAATAATTTGCCCCACTCCAAAGAAGAGGAACAGTTGTCTGTGCCTGATTCTGTAGAAGAGAAACAAGATGCATGCTCGTGTAAACAGATAAATAGCCATTCACAAACCGAATCTCATGATTTTGCTCTCCTGTGGAGATTAGAAAA---TAAAATGCTTTTTCCTCAGACTGTCAAAGTATTGCATGGCAGACTGGATGGCTTCAAACCCAAAGATGTGGATGATGCC------TCAGGTTCTCAGGAAAAAATACCTTATCGAGTTATGTATGATAAAAGTACATTTGTGGAAGAAAGTGAACTTATCGATATTGATGAGACTGAAAAGCTAAATATGCTGTGTAAACTCTTTGATTCGTTTTCAATTGAAGCTGTGAAAGATCTGTACGAAAGATGTAACAAAGACATAAACTGGGCCACCGGTCTACTCTTAGACTCTGATGAAAAGTTACACAAAGATGTTAATACTGAATGGTTTCAA------------GTAAAAGAAGCTGAGCCTGTTGC---AGACTTTGATTTCAAGGAAAATACCAACTATGATGAGAATCTTGAAGATTGCACACAC-------ACAGAGCAAATCACTGGGGCCAGCGATGTT---TCTGATCC---------------TTCAGAAGACAAGAACTCATCAGTCAGCACTGAGGAAAGTAGAGCTGCCAAGACAGTTGTGACAGGTGCTGGTGTGTCTGACTCATCTACTGCTATCTTGTTGAACGATTTGGAGGAACTGAAAAATTCCAGTGATACAGCTCCTAGAGGCTATGCAGGCAGCTCAGCAGCAGGTGTCAATGAGCAGTGCATTTCTGGAATGCAGAAGGTAGAGTCTGTGAGTCCTGTTGA------AGAAGTGATGAATAAGGTATCGGTCTCACAAGTTGATGTAGATTTATACGTACCCGTAGCTTTATCTCATGCTCTTGAA---ACAACCAGCAATTCGA------AATTAAGTAATGAAAGTGA---CAGTAACTCTTCAGAAAGCAATGCGGAGAA---------TGCCAAAGGGATGCCTTTGTTACTGGAAGTGAACGATGTACCTCTGGTGGATTCTAGGAATGATGAAGAACTGGATACTGATAGAGAAAATCTGGGGAGTTCCAGGGAGATCAGTGGTAAAGAGGAAAGTGG------AACTTTGCTCAGGAATGAAGATGAGATCAAGATACAAAGCCCTTCACCAGTATCGTCTGCAGCCTTTGATATAGATAGCCTAGAACTAACTTTACCTCCTGAACTGGCTCTCCAGTTGAAAGAAATATTTGGGCCTGTTGGCATTGATGCAGGTATGG .....:x..:...x....::x:.:xxx..:..xx.....::::..:..:x.x...........x..xx.xx.:..x..x..x.....:::x.....:.x:....::x:x..x.:.x....---.x.:x.:..:....:::.:x:...x-..:.::.....----.x::.:....x...-------------.:x:..:::..-...:.x.x-----...x:.:::.----..x..:..xxx....x..-.....:.-------------------.x.:..x..----..:.:.xxx.x..x.:x..xx:.x..x:...xxxx.:..::::---.x..x:....xx.:.....xx:...x------....xx...x.:x....x..:.....---....xx......x:..:.....x..:.::.--.::.::.x.:....--:.x.:::.x..x...-...:.:::...:x.-..x.::x...-x..:.xx...::...----:::.x..xx.:...--.:..::.x::.x..:.x..x.:.xxxx.::-........x.:xx:.......::::.xx.:...:xx.:..:::x.x..:...:x::.xxx:x:::..x....x..---.:x.:..:........x..:.:.:xx:::x.:xx:..:::..x..x:....x::x:x.xx.:x....x.x.xx...:x.:.x:.xx:.x:x.x:.:.xx.x...x.::..:::.xx:::x.x..:..:...:.x..x...........::.:....:.x.......---......xxx:x..:.xx.xx..:..........:xxx..x...:.:.....x..:..:..x....x.x.x:..:x.:x.------....::x:...:...:x...x..x...x....x..............:..:.....x...........:....:.::.::x.....:x.......x..x..:..x..x........x....:x..x......x.x.....:x.......::.:..:..:..:..:..:.....:..x.x:........x:.:..x:.x..:..:.....x:xx......::::.:...::x:.xx:...:x:x..:...------------.x.xx.x..::..:....x..x.---:.:x..x:....x..:....x..::.:.:.-:.x::...::..::...x.x.xx.:x.-------x.....:xx.x.xx....::::.::x.:x.---x....::.---------------.x.....::x:::......x-----....-x.x.....xx.......:..x---------------.x...:x:xx:x...x..:x:x..x:x...x..x::x.::.x.x:x.x..:x..:..:...xx:.:...:.:.x:.....:x:..:.x.x..--.:..:----x:.x:.:x..:.:......x.x..:.x..x..x.------..:.:x..::x.x....:xx..------x...::::x:..x..xx..x::...x..x.:::..:x.xx:.:x..:.:x:x..:x:.xx...x...x..::.:..:.x---::.x.:..:.x...:.------......:.:.x....x.x.---:.x.:.:...::x....xx..----.....---------.x.......:x.--------------.x.....xxx.x:.xx.xx:.x:..x.:..x......x..x..-------------::..:....xx:..:.:...---------:.:...:.-----.:....:.------.:..xx:x.:..x::x......:.:.:.:.....:x:.::..:x.x....::x:.x.::x.x.::.x:x:.....:x.:..:...:.::.x.....:............:.:..::.x..x...x.......x........:......x......x.. 120M3D25M1D11M4I14M13D11M1D8M5D10M4I18M1D7M19D9M4D43M3D26M6D26M3I30M2D14M2I15M1I14M1D10M1D15M4I14M2D30M1D75M3D166M3D79M6D249M12D23M3D30M1I27M7D30M3D8M15D20M5I4M1I21M15I92M2I5M4I34M6I22M6D79M3D16M6D19M3D21M4I5M9D12M14I43M13I20M9I8M5I8M6D158M 1035/1744 59.3% 1841/94230402 0.0% 245/1744 14.0% 16844267 NA +8316 chr4 + 190214555 40123088 40123087 40123256 169 TAATGATTACATTTTCTTCCCTCCCCCTTCCCCCACAAGGGTCTCTAACAGTTGAAGATTGTGTGGTTCATATAGATCTGAATCTGGCGAAAGTGATTCATGAGAAATGGAAAGAATCTGTAATGGTTGGTAGGCTTCTTTTTATAAAGAGCTCCTTTTTTGTCCATTT chr4 - 94230402 23278921 23278920 23279079 70951324 70951323 70951482 159 TGATGGATGTACTTTCTTCCTTCC----------ACAAGGATCACTAACTGCTGAGGATTGTGTGGTTCATATTGATCTGAATTTGGCAAAAGTGATCCATGAAAAATGGAAAGAATCTATTCTGGTAGGTAGATTTCTTTTGATGTCAAATACTGTGTCAGACCATTT .:...:x.::.:........:...----------......:..x.....x.:...:.................x.........:....:........:.....:...............:.xx....x.....::.......x..:xx:.::x.:x.x.:x.x...... 24M10D135M 122/159 76.7% 159/94230402 0.0% 10/159 6.3% 16844167 NA +6916 chr4 + 190214555 40126088 40126087 40126338 251 ATACATTTATTGTTGAGAGTATGACAGTATTTATACTACTTT-GTAGATCCTTCCTTGGTTGGACATACTGGGCTTGATAATCCTGAACAAAAATCATCTCAGAGAACAGGCAAAAAATTACTGAAGA---------------CTTTAA---------------------------------CAGCATCTGAAATGCTACCTTTATTGGATCATTGGAATACTCAAACTAAAAAAGTATCACTCAGAGAAATAATGTCAGAAGAAATTGCCTTACAGGAAAAACATAATTTGGTATGAAT chr4 - 94230402 23280558 23280557 23280857 70949546 70949545 70949845 300 ATAAACTAATTGTTTTACTTGTCACCTCATTTTTACTGCTTTTGAAGGTTCTACATTGATTCAGCAGATAGATATGAATGACCCCAAAATGCTGTTATCTCAAAATGCTGACAATAAAATGCAGAAGAAGGGAATGAGCTGGGTTTCAAGCTCATCTAACGAAATGCAGACTAAAAAAGCAGCAACATCAGAAGTTTTTCCTTTTATGGATCACTGGAATGCTCGAACTCAGAAAGTTTCCCTCAGACAAATAATATCTGAAGAAATAGCCATGCAGGAGAAAGAGGACCTGGTATGAAT ...x.:.x......xx:xx.:.x..xx:....x....:....-.x..:.:..x.x...:..x::..x.:x.:xx.x:..:.:..::..xx:xx:.:......:.:x:.x.:...x...x.:.x.....---------------:..:..---------------------------------..:....x...:.x:.x.....xx.......:......:...:....x.:.....x..x......x.......:..x........x...x.:.....:...x.x:.::.......... 42M1I85M15I6M33I118M 169/251 67.3% 300/94230402 0.0% 49/251 19.5% 16845530 NA +3401 chr4 + 190214555 40127293 40127292 40127375 83 CTGCAGCCTCAACCTCCTGGGTTTAAGTGAGCCTCCTGTCTTAGACTCCCAAGTAGGTGGAACCACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..x..:.......:.....xx:.x.xx.x..:..x..::.......x......:...--.:..::....::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 21930167 NA +8103 chr4 + 190214555 40131746 40131745 40131924 179 TGTTTCTAGTATTAC-ACATTTCATCTTGAACATGATTTT-------TATGTTTTTGTTTT------AGAAAAGGGAGACCCTTATGTTTGAAAAAGATTGTGCCACTAAACTAAAGGAGAAGCAGCTCTTTAAGATATTTCCAGCCATTAACCAAAATTTTCTGGTGGACATTTTCAAGGACCACAAGTGAG chr4 - 94230402 23282245 23282244 23282437 70947966 70947965 70948158 193 TGGTTCCACTGTTACTATATTTTGTTCTAATCATGAACTTGCAATATTATTCCTTTGTCTTCTGGATAGAAACGTGTTCCTTCTATGGCTAGAAAAGATTGTGCTGCTAAACTGAAGGAGAAGCAACTTTTTGAGATGTTTCCAACTATTAATCAAAATTTCTTAATGGATATCTTCAAGGACAATAAGTAAG ..x...:.x.:....-.:....::.::.:.x.....x:..-------...x::.....:..------.....x.x.xxx.:::....x:.::............::.......:...........:..:...:....:......:.:.....:........::.::....:..:.........x.:....:.. 15M1I24M7I14M6I126M 131/179 73.2% 193/94230402 0.0% 14/179 7.8% 16849501 NA +6832 chr4 + 190214555 40136923 40136922 40137086 164 TTCTACTTAAATTTTCTACAGCTATTCATTAGAACACACAGTGCAATTTCTTAACTGTGTTCTTGAAGGGGACCCTGTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACATCTCATACTGGCCAGAAGTCTAAAGAGAAAAAGGTAT chr4 - 94230402 23283750 23283749 23283911 70946492 70946491 70946653 162 TCTTACTTA--TCATTTACAGCTATTCTTTAGAGCAGACCGAACAATTTCTGAACTGTGTTCTGGAGGCAGATCCTGTAAAAACAGTTATAGCTCAAGAAAGTGTTCAGCGAAATGAAATTGTTTCTTCATACAGTGCTGCAAAGAGCCGGGAGAAGGTGGtat .::......--.:x.:...........x.....:..x..x.x:........x...........x..:.x:..:...............:....:.....:xx......x.:......:.x...:x.x..x:.:.x..x:xx:...xx:x::.....::x..... 9M2D153M 115/162 71.0% 162/94230402 0.0% 2/162 1.2% 16853173 NA +8394 chr4 + 190214555 40142665 40142664 40142928 264 TCTTATAGCCAAAGAAATTAAAAGAGACTGAAGAAACACCAAGTGAACTGTCTTTCCAGGACTTTGAGTACCCAGACTATGATGACTACAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAGTGCTACAGCAAGGCCAAAGAAGCTTATCGGATAGGGAAAAAAAATGTCGCCACCTTTTATGCCCAGCAGGTAAAGTGGAAAACTGATTATATATTTTTTGTCAGTTATAATAACTAAATACT--CTTGAAGCAGATAA chr4 - 94230402 23284023 23284022 23284285 70946118 70946117 70946380 263 TTTTACAGGCAAGAAAAGCTAAGGAAGAGGATGACGTTTTGAGTGAAATATTT---CAAGAATATGAGTATCCACAGTATGATGACTTCAGAGCAGAAGCTTTTCATCACCAACAAAAGAGGCAGGAGTGCTTGAAAAAGGCTGGGGAGGCCTATCACATGGGAATGAAGCCTGTGGCAGCATTTTATGCACATCAGGTAAACTTAAATATGGTGCTTGCTTTCTGTGTTTAGAGACATAATTAAATACTGGATTGGAAGAGATAA .:...:..x...::...x:x..:..::xx..x..x::x:::......x.:.:.---..:..x.x......:...x.x..........x.........:.....:.x.........:......xx........xx.:x.....::::..:..:....:x..:..:.x:..:xx...x..x:.x........x..x........x.x:..x.:x.xx:x.::x..:.x...:x:xx:xx....:........--x...:.:x...... 53M3D194M2I14M 171/261 65.5% 263/94230402 0.0% 5/261 1.9% 16858642 NA +9092 chr4 + 190214555 40144630 40144629 40144806 177 AGGGTACTCTTCATGAGCAGAAGATGAAAGAAGCCAATCACCTTGCTGCCATAGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGCCACAGAATGTTTTAGACCTCCATGGGCTGCATGTGGATGAAGCTCTAGAACATTTGATGAGAGTTTTAGAGAAGAAGACTGAAGGTAGGA chr4 - 94230402 23286596 23286595 23286772 70943631 70943630 70943807 177 AGGGTCGCCTTCACGAGCAGAAGATGAAGGAAGCCAACCATGCTGCTGCTGCACAAATCTTTGAAAAAGTAAATACTTCCTTGCTGCCTCTGAATGTGTTGGATCTGCATGGTCTCCATGTGGATGAAGCTGTGAATCAATTGTCCAGAGTGCTGCAGGAAAAAAGCAACGGTAGGA .....xx:.....:..............:........:..:x:......:::.x.:........:.....x...:....x:.......x.x......x..:..:..x.....x..x...............x.::.x..x...x:x.....x:.:x..:.:..:.x::.x....... 177M 131/177 74.0% 177/94230402 0.0% 0/177 0.0% 16858034 NA +3032 chr4 + 190214555 40146210 40146209 40146316 107 ATACAAGTTGTATTTAGGATAAATTCTAAAATCCCTACATAATATCTCTTGCTTACCTCTCCAGTCTCACCCTGTGTTTTTTTCTCCTTTTCTGTATATTTAACTAC chr4 - 94230402 9596981 9596980 9597087 84633316 84633315 84633422 107 ATACTTGCTATTGCTTGGCTGGAAGCTAAAATCTCTACAAAATATCTATTTTGTTTATCTCTAGCTTCACTTTGGTAGATCCCCTGTTTCTCTATGTATTCAACTGC ....xx.:.:.xx:.x..x.::.xx........:.....x.......x..x:x.x:x....:..::....::..xxxxx.:::..x:..:...:.:....:....:. 107M 65/107 60.7% 107/94230402 0.0% 0/107 0.0% 30549229 NA +9878 chr4 + 190214555 40152710 40152709 40152923 214 TAAGGTTTACGTTTTCTATTGAGAATGT----------AAGATAAA---TGAATTTTAACTCCCCTGATTTCTGTTGTAACAGAATTTAAGCAGAACGGTGGGAAGCCCTATTTGTCTGTGATTACGGGGAGAGGAAACCACAGCCAGGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTACCTCATAAGCCATAGCTTCAGGTGAGTGTAGATTTCTGTTA chr4 - 94230402 23288122 23288121 23288348 70942055 70942054 70942281 227 TAACGTTTAATTTCTTTATTCATGTTATTGTCACTTAAAAAATAGAGAGTAAGTTTTAACTGTTACTGTGCCTGCTATTACAGAGTACCAACAGTCTGGTGGTAAACCTTATCTCTGTGTTATCACGGGAAGAGGAAGCCATAGTCAGGGAGGAGTTGCTCGCATCAAACCAGCAGCTATCAGATACCTCACAAGCCACAACTTCAGGTGAGTTTAGGTTTTTGTTA ...x.....xx..:.:....x.x:x.:.----------..:...:.---.:.:........x::x:x:.x:...:.:.x.....:.x:x.:...xx:.....x..:..:...:.x.x...x..:.....:.......:...:..:.............................x.::..:.::.......:......:.:............x...:...:..... 28M10I8M3I178M 156/214 72.9% 227/94230402 0.0% 13/214 6.1% 16864588 NA +4478 chr4 + 190214555 40154148 40154147 40154362 215 TTGAAATTTTCATCTTTAAAATAACTCTTTTCTCATTTCTGCAGGTTCTCTGAAATTAAACCAGGGTGCTTGAAAGTCATGCTAAAGTAAA------ATAAACATCCTTGAATTAGAAGT---ATGAAGGTTTGTAGGTTAAAATTACTTT--TATTTGCAGTAATTCAGTCAATTCTACCCTAAA-GATGTGTTTTATTATAAATAATATTCAATTATGAAACAAA chr4 - 94230402 23289088 23289087 23289311 70941092 70941091 70941315 224 TTAAATGTTTCATGTTGAAACTTCATCTTTTCTTGTTTC-ACAGGTTTTCAGAAATAAAGCCAGGCTGCCTGAAAGTCATGCTGAATTGAACGGTTGATGAGAAGAGGAACATAAAAAATGAGATGTTGGATTACAGCTAAAAACTTTTTGAATAACTGCAATAATATTTTCTTATCTGTTTTAAAGGATGGTATTTATTAGAAGTGGT-CTCAATT-TGCAGCAAA ..:..xx......x..x...x.xxx........::....-:......:..x.....x..:.....x...:.............:..x.:..------..:.:x.xxxxx:x..x.:..:.---...xx..x..::..x.x....:.x:..x--..x:....:....x:xx..xxx...::::....-....xxx.......x..:.::.-:......-..x.:.... 39M1D51M6I23M3I28M2I33M1I22M1D7M1D9M 143/212 67.5% 224/94230402 0.0% 15/212 7.1% 16865060 NA +3290 chr4 + 190214555 40185217 40185216 40185287 71 CTCATTGGCTGTGTGGCCTTATGTAAGTTGCTTAACCTTTCTGAACTTCACTTTTCTCATTTACAAAGTGA chr4 - 94230402 11947207 11947206 11947277 82283126 82283125 82283196 71 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGA ....:.::.......:.....x..x...::.....:..x:...x::::..x...:.:...x..::..:... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 28238010 NA +3300 chr4 + 190214555 40194304 40194303 40194386 83 CTACAACCTCTGCCTACTGGGTTCAAGCAATTATCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGAGCTACCGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx:x..x...........::x..xx.xx.x........:..:.........:.:....--.:..x:.:..:... 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 21997178 NA +3405 chr4 + 190214555 40195362 40195361 40195464 103 CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCCTTCTCTTCCTTTTCCTTCCCTTCCC------TCCTTCTGTCTGTCC chr4 - 94230402 23891361 23891360 23891469 70338934 70338933 70339042 109 CCTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCCAAAGAGCCCCTTTGTCTGGCC .:...:xx:.x.:...x:..:::..x:..:x..x:..::..:x..::..:..:...:.::.:.x.:....:.....::.:........------:..:.:......x.. 88M6I15M 63/103 61.2% 109/94230402 0.0% 6/103 5.8% 16304001 NA +3001 chr4 + 190214555 40201933 40201932 40201980 48 TTAACTCCATGAGTTTTTTTTTTTTTTTTTTTTTTTTTAAGACAGGGT chr4 - 94230402 19972537 19972536 19972584 74257819 74257818 74257866 48 TTAGTTCCATGAGTTTTTTTGTTTGTTTTTTGTTTTTTGAGGCATGAT ...::...............x...x......x......:..:..x.:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 20229396 NA +3105 chr4 + 190214555 40225076 40225075 40225149 74 TTAAAAGAACTTTTTGGTAGAGATGTTTGTTCATTTTTGTTTTTTGTTTGTTTGTTTTCAGACAGTCTCACTTT chr4 - 94230402 29046213 29046212 29046286 65184117 65184116 65184190 74 TTAAAAGAGCTTTTCTTAACTGGTGTTGCTTTATTACTATTTTTTGTTTGTTTGTCTTCATAAAGATTGAATTT ........:.....:xxx.xx.:....xx..:...x:.:................:....x.x..x:.x.x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 11178863 NA +3824 chr4 + 190214555 40225187 40225186 40225265 79 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATATCTCAGCCTCCCAAGTAGCTGGACTTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.::..........x...x..x:x........::............x:....--.:........ 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 22028061 NA +37139 chr4 + 190214555 40243384 40243383 40243962 579 AAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGGCGACTCTGCTGTGGGGAAAACCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACACAGGGGTGGACGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATGTGCTACTCTGTGGCCAACCATAACTCATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCCTGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGAAGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAACAGAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTTCTAA chr4 - 94230402 23317992 23317991 23318570 70911833 70911832 70912411 579 AAAATGTTGGATTCTATCAAGTGCGTGCTGGTGGGAGACTCCGCAGTGGGAAAAACATCTCTCTTGGTGCGTTTCATCTCTGACACTTTTCCAGACAACTACAGACCCACTGTGTATGAGAACACTGGAGTGGATGTCTTCATGGATGGCGTCCAGATTAGCCTAGGCCTTTGGGACACATCTGGAAGCGATGCCTTCAAAGGCATTCGCCCCCTCTCCTACCAACAGGCAGATGTGGTGTTAATGTGCTACTCCGTGGCAAACCACAACTCCTTTCTAAACCTGAGGAGCAAATGGATTGGCGAGATCCGCAACCATCTGCCCCGCATCCCTGTTTTGGTAGTGGCCACGCAGACCGACCAGCGTGACACGGGGCCCTACCGCTCCTCCTGCATCAGCTCCATGGACGGCAAGCGGCTGGCCCAGGATGTGCGAGCCAAAGGCTACCTGGAGTGCTCAGCCCTCAGCAACCGCGGCGTGCAGCAGGTGTTCGAGTATGCTGTGCGGACGGCAGTCAATCAAGCCAAGAGGCAGAACAGGCGGAAACTCTTCTCCATTAACGAGTGCAAGATCTTCTGA ..:...:..::...:............:.......x.....:..x.....:.....x.....x........:....:...:..x..:..:..:..x:x.....::.....x.....:........x..:.....:...............:.......:.....:.....:.........x.:..x.::..:.......:.:....:..x.....x........:........:......:.:...........:.....x.....:.....x..:..:...:...:..:...:........:..:..:x.x.:.x.::.....:.:.:......x:....:........x.....:........x..x.:.......:..x.xx........:...::x.......x..x...x::..............xx.......:.......................:.....:..x..x..:...........:....::..:..x..:..x..x.....:..:....:...:.::.....:x...::...........:..:................:. 579M 459/579 79.3% 579/94230402 0.0% 0/579 0.0% 16925392 NA +3269 chr4 + 190214555 40245523 40245522 40245581 59 AGGGAGACTCCATCTCAAAAAAAAAAAAAAGAAAAGAAAAAAAAGAAAGAAATTGCAAA chr4 - 94230402 71886267 71886266 71886325 22344078 22344077 22344136 59 AAGGAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAA .:....x:..:..x...:.........:..:.........::x.:..x.......x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -31640744 -62589658 +3284 chr4 + 190214555 40262415 40262414 40262474 60 AGTTGACCTTTAACCATATATATATATATATATATATATATATATATATTTTTTTTTTTT chr4 - 94230402 5397740 5397739 5397799 88832604 88832603 88832663 60 AATTGACTTTAAATTATATAGATATATATCTATATATAACTATCTATATCTTTTTATCTT .:.....:..x..::.....x........x........xx...x.....:.....x.:.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 34864675 NA +3164 chr4 + 190214555 40262417 40262416 40262493 77 TTGACCTTTAACCATATATATATATATATAT------ATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTAAGATGGA chr4 - 94230402 42757842 42757841 42757924 51472479 51472478 51472561 83 TTCACTTTTCCTCATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTTGCAAAGATGGA ..x..:...xx:.....:.:..x:.......------......:.....x..:......::...x.x.x...x:x........ 31M6I46M 57/77 74.0% 83/94230402 0.0% 6/77 7.8% -2495425 -91734977 +3319 chr4 + 190214555 40262425 40262424 40262484 60 TAACCATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735340 92735339 92735399 1495004 1495003 1495063 60 TAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .....x:x.::....x.....:...:..:.:........x......:.x.........:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -52472915 -41757487 +3139 chr4 + 190214555 40262429 40262428 40262482 54 CATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735350 92735349 92735403 1495000 1494999 1495053 54 CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....x.....:...:..:.:..........x.x..:.x.........:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -52472921 -41757481 +3405 chr4 + 190214555 40262431 40262430 40262485 55 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735402 1495001 1495000 1495055 55 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT .::....x.....:...:..:.:...............:.x.........:.x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -52472917 -41757485 +3056 chr4 + 190214555 40262432 40262431 40262479 48 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681936 8681935 8681983 85548420 85548419 85548467 48 ATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..........:...::.:.:.:...:.....x:.:............. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 31580496 NA +3253 chr4 + 190214555 40262432 40262431 40262484 53 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:..........x....:.x.........:.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -52472919 -41757483 +3172 chr4 + 190214555 40268707 40268706 40268791 85 GAAACTCAGAAAAAAAAAAAAAAAAAGAGACAAAAACCAAACAACCAAACAAACAAAAACCATATAACAACAACAAC-----AAAATTAA chr4 - 94230402 65284338 65284337 65284421 28945982 28945981 28946065 84 GATGCTCAGTCCAAAAAAAAAAAAAA------AAAGCCTAACAAACAAACAAACAAAAAACCCATCTTAACAAGATCTCTTGAAAATTAA ..x:.....xxx..............------...:..x.....x..............x.x:..xx:.....x.x.-----........ 26M6D45M5I8M 63/79 79.7% 84/94230402 0.0% 11/79 13.9% -25015631 -69214771 +3245 chr4 + 190214555 40268715 40268714 40268766 52 GAAAAAAAAAAAAAAAAAGAGACAAAAACCAAACAACCAAACAAACAAAAAC chr4 - 94230402 90957680 90957679 90957731 3272672 3272671 3272723 52 GAAAAAAAAAAAAAAAAACCAAAAAAAACCAACCAACCAAACCCACAACAAC ..................xx:.x.........x.........xx....x... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% -50688965 -43541437 +3003 chr4 + 190214555 40268717 40268716 40268768 52 AAAAAAAAAAAAAAAAGAGACAAAAACCAAACAACCAAACAAACAAAAACCA chr4 - 94230402 14334317 14334316 14334368 79896035 79896034 79896086 52 AAAAGCCAAAAAAAAAAAAAAAAAAACCAACCAACCAACCAAACAACAAACA ....:xx.........:.:.x.........x.......x.......x..x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 25934400 NA +3154 chr4 + 190214555 40270952 40270951 40271013 62 TGTTTCTCTTTTTTTTTTTTTTTTTTTCTTTTTTGAGACGGAGTTTTGCTC--TTGTCGTCCAG chr4 - 94230402 5847639 5847638 5847702 88382701 88382700 88382764 64 TGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGCTGCTCAG ..:....x.x:..............:..:.........x.xx..:......--...::.::... 51M2I11M 48/62 77.4% 64/94230402 0.0% 2/62 3.2% 34423313 NA +3063 chr4 + 190214555 40291952 40291951 40292004 53 ATTTATTTCTGTTTTTCTTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339958 49339957 49340010 44890393 44890392 44890445 53 ATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ....x...:..x.x.x:..:..:....:...:.................::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -9048006 -85182396 +3049 chr4 + 190214555 40297613 40297612 40297677 65 AGTGTGAATGTCCATGTATGCATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA chr4 - 94230402 36532051 36532050 36532112 57698291 57698290 57698352 62 AGTGAGAAGG---GTATATGCAACTCTGTGTGTATGTGTGTGTGTGCATATGCAAGTAAAAGAGA ....x...x.---:.:......x..x.......:............::.:..::..x:.:..... 10M3D52M 47/62 75.8% 62/94230402 0.0% 3/62 4.8% 3765562 NA +3194 chr4 + 190214555 40297635 40297634 40297684 50 TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982305 18982304 18982354 75248049 75248048 75248098 50 tctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x.x.x.x..................x.x...............::.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 21315330 NA +3374 chr4 + 190214555 40297635 40297634 40297686 52 TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982303 18982302 18982354 75248049 75248048 75248100 52 tctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x.x.x.x.x..................x.................::.. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 21315332 NA +3102 chr4 + 190214555 40297647 40297646 40297682 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -41331417 -52898985 +3316 chr4 + 190214555 40297649 40297648 40297684 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -41331415 -52898987 +3567 chr4 + 190214555 40297649 40297648 40297688 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 21315334 NA +3102 chr4 + 190214555 40297651 40297650 40297686 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -41331413 -52898989 +3353 chr4 + 190214555 40297651 40297650 40297690 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 21315336 NA +3139 chr4 + 190214555 40297653 40297652 40297692 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 21315338 NA +3845 chr4 + 190214555 40301806 40301805 40301921 116 TGTGGTTGAGCCCCCTCCCAGACAGGCTGATTTGTGAATGTGCTGAACTCCAGAGCACCAGTAGCCTAACCACAGAGCGGTGTTTTGTTTCTCTACCGGATACACCTGCCAAAAAG chr4 - 94230402 23334568 23334567 23334679 70895724 70895723 70895835 112 TGTGGCGGAGCCGCTTGTGTGCAGTGCTGGTTGGTGAGCAAGCCGAGGT----AAACCGACCAGCTTAACCACAGGGACGTGTTTTCTTTCTGCACCGGAAACACCTGCCAAAAGG .....:x.....x.:.x:xx.xx:x....:..x....:::x..:..:x.----.:xx.x.x:...:.........:.xx.......x.....x:......x.............:. 49M4D63M 76/112 67.9% 112/94230402 0.0% 4/112 3.6% 16967238 NA +3221 chr4 + 190214555 40303398 40303397 40303457 60 CAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATGGAAGGAGAGAAGGAAGG chr4 - 94230402 38421704 38421703 38421763 55808640 55808639 55808699 60 CAAAAGGAAAAGGGAAGTAAGTAAATAAATAAATAGACAAATTGAAGAAAAAAAGGAGAG .....x:..x.::x..:...:..............:.:....x....:.:.:.....::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 1881694 NA +3051 chr4 + 190214555 40326617 40326616 40326668 52 AAACAAACAAACAAACAAAAAACCAATAACAACAACAACAAAAAAAAACAGG chr4 - 94230402 65284690 65284689 65284741 28945662 28945661 28945713 52 AAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACAAAAAAAGG ...x................x.x...:........xx...x.x.....x... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -24958073 -69272329 +3309 chr4 + 190214555 40326622 40326621 40326707 86 AACAAACAAACAAAAAACCAATAACAACAACAACAAAAAAAAACAGGATTAGTATTGCCAATATTCTCTCTCTCTTTTTTTTTTTC chr4 - 94230402 70210890 70210889 70210969 24019434 24019433 24019513 80 AATAAGCAAATAGAAAACAAACAACAACAACAACAAAGAAAACCACAACCTTTCTCTC------TCCTTCCTCCTTTATTTTTTTC ..:..:....:.:.....x..:...............:....x..x:.::xx.x.:x.------..::..:::....x........ 58M6D22M 57/80 71.2% 80/94230402 0.0% 6/80 7.5% -29884268 -64346134 +3111 chr4 + 190214555 40326625 40326624 40326662 38 AAACAAACAAAAAACCAATAACAACAACAACAAAAAAA chr4 - 94230402 79230836 79230835 79230873 14999530 14999529 14999567 38 AAACAAACAAACAAACAATAACAACAACAACAAAAAAA ...........x..x....................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -38904211 -55326191 +3084 chr4 + 190214555 40332712 40332711 40332768 57 TTTTAAAGGAGCTTTGAGGGGGTTTTTTTGTTTGTTTGTTTTGTTTGTTTGTTTTTC chr4 - 94230402 84354816 84354815 84354869 9875534 9875533 9875587 54 TTTTAAAAGGGTTTTTTGGGGTTTTTTTTGTTTGTTTGTT---TTTGTTTTTTTCCC .......:.:.:...xx....x..................---.......x...::. 40M3D14M 45/54 83.3% 54/94230402 0.0% 3/54 5.6% -44022104 -50208298 +3704 chr4 + 190214555 40332716 40332715 40332778 63 AAAGGAGCTTTGAGGGGGTTTTTTTGTTTGTTTGTTTTGTTTGTTTGTTTTTCAAGACACATA chr4 - 94230402 38042680 38042679 38042742 56187661 56187660 56187723 63 AAAGGTATTTTGTGGGGTTTTTTTTGTTTGTTTGTTTTGTTTTTGTTATTTGCAAGGCATata .....x::....x....x........................x.x.xx...x....:..:... 63M 51/63 81.0% 63/94230402 0.0% 0/63 0.0% 2290036 NA +9616 chr4 + 190214555 40335824 40335823 40335980 157 TAGCTGCAGAGACGGCAGATGGAAAATATGCTCAGAAGTTGTTTAATGACCTTTTTGAAGATTATTCTAATGCTCTTCGTCCAGTGGAAGATACAGATAAAGTCCTGAATGTGACCCTGCAGATTACGCTCTCTCAGATTAAGGATATGGTGAGTAA chr4 - 94230402 23354642 23354641 23354798 70875605 70875604 70875761 157 TAGCTGTAGAATCAGCCAAAGGGAAATATGCTCAGATGCTGTTCAATGAACTGTTTGAAGACTATTCAAATGCTCTAAGACCAGTGGAAGACACGGATAAAGTGCTGAACGTTACCCTTCAGATAACATTGTCCCAAATTAAAGATATGGTGAGTAA ......:...:x.:..x:.x..:.............x.:....:.....x..x........:.....x........xx.x...........:..:........x.....:..x.....x.....x..::.x..:..:.....:.............. 157M 126/157 80.3% 157/94230402 0.0% 0/157 0.0% 16981182 NA +9973 chr4 + 190214555 40337202 40337201 40337375 174 TTGTGTAGGATGAAAGAAACCAAATTCTGACTGCTTATTTGTGGATCCGCCAAATCTGGCACGATGCCTATCTCACGTGGGACCGAGATCAGTACGATGGCCTAGACTCCATCAGGATCCCCAGTGACCTCGTGTGGAGGCCAGACATCGTCTTATATAACAAGTAAGTGCAGC chr4 - 94230402 23355586 23355585 23355759 70874644 70874643 70874817 174 TTGTGCAGGATGAAAGGAACCAAATTTTGACAGCTTACTTATGGATTCGACAAAGCTGGTATGATGCATACCTCAAATGGGATAAGGATAAATATGATGGATTGGATTCTATCAGAATTCCAAGCAATTTGGTCTGGAGGCCAGATATTGTCCTCTATAACAAGTGAGTGAGGC .....:..........:.........:....x.....:..:.....:..x....x....:.:.....x..:....x:.....:x::...x.:..:.....x:.:..:..:.....:..:..x..::.::.x..x...........:..:...:.x..........:....x:.. 174M 131/174 75.3% 174/94230402 0.0% 0/174 0.0% 16981616 NA +3158 chr4 + 190214555 40338874 40338873 40338915 42 CTCTCTCCCTCTCTCTCTCACACACACACACACACAGAGCAA chr4 - 94230402 85043598 85043597 85043639 9186764 9186763 9186805 42 CTCTTTCTCTCTTCCCCTCACACACAGACACACACAGAGCAA ....:..:....::.:..........x............... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -44704724 -49525678 +32616 chr4 + 190214555 40348863 40348862 40349493 631 TTCCTTATCTGACCTTCAGGGCTGATGATGAATCTTCAGAGCCTGTGAACACCAATGTGGTCCTGCGGTATGATGGGCTGATCACCTGGGATGCACCGGCCATCACCAAAAGCTCCTGTGTGGTGGATGTCACCTACTTCCCTTTTGACAACCAGCAGTGCAACCTGACTTTTGGTTCCTGGACCTACAATGGCAATCAGGTGGACATATTCAACGCCTTGGACAGCGGAGATCTCTCTGACTTCATTGAAGATGTGGAATGGGAGGTCCATGGCATGCCCGCTGTGAAGAATGTGATCTCCTATGGCTGCTGCTCTGAGCCTTACCCGGATGTCACATTCACCCTCCTTCTGAAGAGGAGGTCCTCGTTCTATATCGTCAACCTCCTCATCCCATGCGTCCTCATATCTTTTCTGGCTCCTCTGAGTTTTTATCTCCCAGCAGCCTCCGGAGAAAAGGTCTCCCTGGGAGTGACCATCCTGTTGGCCATGACTGTATTTCAGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAAATGTGCCCCTGATAGGTGAGTCCAAGTGTCTTCCACTTCAAGCCCAGCTTTGTAGTGCCTGGGGTCATGCCTTTA----AGGTTGTGTGTGTGCCTTT chr4 - 94230402 23356383 23356382 23357010 70873393 70873392 70874020 628 TTGCTTTTCTGTCTTTTAGGGCTGATGATGACTTTTCAGAACCCGTTAATACTAATGTTGTGTTGAGATATGATGGAAAAATCACTTGGGATGCACCTGCTATCACAAAAAGCTCGTGTGTAGTGGATGTATCTTATTTTCCTTTTGACAGCCAGCAGTGCAACCTTACGTTTGGTTCCTGGACCTATAATGGTAATCAGGTAGACATCATCAATTCTCTCGATAGTGGTGACCTTTCTGACTTTGTAGAAGACGTGGAATGGGAGATTCATGGTATGCCGGCGGTTAAGAATGTAATCACTTACGGCTGCTGCTCCGAGCCTTATCCAGATGTAACGTTCACGCTGATTTTGAAAAGGAAGTCATCTTTCTACATATTTAATCTTCTGCTTCCTTGCATTTTGATCTCTTTCCTCGCTCCACTGGGATTTTATCTCCCCGCAGACTCTGGAGAAAAAGTGTCTCTAGGTGTTACAGTTCTTCTTGCTCTGACTGTGTTCCAGCTGATGGTTGCAGAGATTATGCCTCCCTCTGAAAACGTACCTCTGATAGGTGAGCTTTACATGCTTTGTCCTTAAACGCAGCTT-------ACTGAAATCAGGGCTGTATGTCAGGTAGACTGTGTGTCATT ..x...x....x.:..:..............x.:......:..:..x..:..:.....x..x:..x.:........:xx:.....:...........x..:.....x........x.....:........xx.:..:..:..........:...............x..x.................:.....:........:.....xx....:x.::.x..:..:..x..:..:........::.x.....:............:.:.....:.....x..x..x........:...x.:..:...........:........:..:.....x..:.....x..xx..:....:....:...x..x.....:..xx.:..:..:..xx.:..x...:.::.x..x.....:..x.....x...:.x...........x....x...:........:..x..:..:..x..x..x:.:..x:.x..:x.......:..:.....:.....x.....:..:.....xx....x.....:..:..:............:::x.xxxx...:xx.:.:..:.x......-------x...:::...x.x..x..----....x.xx......:.x.. 587M7D18M4I19M 471/624 75.5% 628/94230402 0.0% 11/624 1.8% 16992480 NA +19305 chr4 + 190214555 40353964 40353963 40354528 565 TTATTTTA-ATTCCAGGTAAATACTACATAGCCACGATGGCCCTGATCACAGCCTCCACTGCGTTGACCATCATGGTGATGAATATCCACTTCTGTGGGGCCGAGGCCCGGCCGGTGCCACACTGGGCCAGGGTGGTCATCCTGAAATACATGTCCAGGGTCTTGTTTGTCTATGATGTGGGTGAAAGCTGCCTCAGCCCGCACCACAGTAGAGAGCGGGACCACCTCACGAAAGTTTATAGCAAACTCCCA-GAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAAGAAGGACA---------------------TGAACAAACGCTTAAAGAACGACCTGGGCTGCCAGGGTAAGAACCCTCAGGAGGCCGAGAGTTACTGTGCACAGTACAAAGTGCTGACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGTCATAGACCGATTCTTCATGTGGATTTTTTTCATTATGGTGTTTGTGATGACTATTTTGATCATAGCAAGAGCGGATTAGTCACAGAT chr4 - 94230402 23357363 23357362 23357937 70872466 70872465 70873040 575 TTATTCTGTGTTCCAGGCAAGTATTACATAGCAACTATGACCATGATCACAGCCTCCACTGCGCTGACAATCATTATAATGAACGTCCATCACTGTGGCTCAGAAGCAAAGCCTGTCCCACAGTGGGCCAGAGTGGTAATCTTGGACTATATGTCAAAAATTTTTTTTGTTTATGATGTGGGTGAAAATTGTACAAGTCCACGAAGAGAGAAGGAACAAGAACAC--------AGGTTAGAGGGCGGTGACATGTGT-----CGGGGGGGAGACGGAAAGAGCCACCTTTCCAGTAGAAATGATGACAGTGATCTCAAAGAAAATCTGAATGGAAATTGGAATAAAAGCTTTGGAGTTCATGGTGAAAATGTTAGGGAGAATGTTAATTGCTGTTCCTGTTACAAAATGCTGATTAAAAATATTGAGTATATTGCGAATTGTGTTCGAGACCATAAAGCAAACCGGGCCAAAGGAATTGAGTGGAAAAAGGTGGCAAAGGTGATGGACAGGTTTTTCATGTGGATTTTTTTTATCATGGTGTTTTTTATGAGCGTGCTTATCATTGGGAAAGCAGCTTAGCTGCAGAT .....:.:-:.......:..:..:........x..x...:..x....................:....x.....x:.:.....::....::x......xx.x..:..xx:...x..x.....x........:.....x...:..:.x..:.....x.:::.:..x.....:................::..:x:x..:..:.:xx:x::x.::..:.::..x...--------..x...x..x:x:x.xx..-.x..-----.x.:::.x..x.:.:..x.:xx..........x.::..x..::---------------------....:::.x::.x:..x..x::.:.x..xxx:..x...:.:..:x:.x:....:x:.xx.:..:....x.x::x......:......:x.::...........:..:..x..x..:x.:x:......:..:..x.x.x:xx....:..:.x...:.....:........:..:..x..:...x.:..:.................:..:.........x.x....x::.x:.x.....x.x:.:...:.x....:::..... 8M1I216M8D19M1I4M5D43M21I262M 368/552 66.7% 575/94230402 0.0% 36/552 6.5% 16996601 NA +3140 chr4 + 190214555 40362874 40362873 40362914 41 AAACAAAAACAAACAAACAAACAAAAAAGCTTGTAAGAAAA chr4 - 94230402 72288804 72288803 72288844 21941559 21941558 21941599 41 AGACAAAAACAAACAAACACACAAAAAAACTTGAAAGAAAA .:.................x........:....x....... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -31925930 -62304472 +3249 chr4 + 190214555 40382324 40382323 40382382 59 AAAAAAAAAAAAAAAAAAAGTAAATAAATAAATAAATAAAGTGCTGAAGGAAAAAACAA chr4 - 94230402 53293869 53293868 53293922 40936481 40936480 40936534 54 AAGCAAAAAAAAAAAAAAAGTGAATGAATAAATAAATAAA-----AATGGAGAAAGCAA ..:x.................:...:..............-----:.x...:...:... 40M5D14M 46/54 85.2% 54/94230402 0.0% 5/54 9.3% -12911545 -81318857 +3012 chr4 + 190214555 40394300 40394299 40394347 48 CCCCCCACCCGCCCCCCCAAAAAAAGAAAAAGAAAAAGAAAATAGGAA chr4 - 94230402 59404623 59404622 59404670 34825733 34825732 34825780 48 CCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAA ......x...x..............:.....:..:..:..:.:.x:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -19010323 -75220079 +3171 chr4 + 190214555 40394301 40394300 40394341 41 CCCCCACCCGCCCCCCCAAAAAAAGAAAAAGAAAAAGAAAA chr4 - 94230402 16535119 16535118 16535159 77695244 77695243 77695284 41 CCCCCACCCCCCCCCCCAAAAAAAGAGAAAAAAAAGAAAAA .........x................:...:....::.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 23859182 NA +3179 chr4 + 190214555 40402418 40402417 40402491 74 CTGCAGCCTCCGCCTTAGGGGTTCAAGGGACTCTGGTGCCTCAGTCTTCCAAGTAGCTGGGAATACAGGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx:x...xx.........x.x:..xx:x.x.....:...:...........:.x....x....:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 22205292 NA +3071 chr4 + 190214555 40403498 40403497 40403590 93 CCACAGTGCACAAATGAGGAAACTAAGACGCAGAAAGATGAAATAACTTGCCCAAGGTCACGCAGGCCCAGTATAAATAACACCAGTCGCCCC chr4 - 94230402 15193227 15193226 15193318 79037085 79037084 79037176 92 CCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACA-GCTTGTCAGAAATAAAATTTATAGTCCC .....x.x:.:.xx..::.:..:.:.:..x....x.:..:.........x..:.......::..-..:::x:.x......x.::x:.x.:... 64M1D28M 59/92 64.1% 92/94230402 0.0% 1/92 1.1% 25210271 NA +3000 chr4 + 190214555 40403791 40403790 40403840 50 TTCTTTGCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGTGTTTCACTCTT chr4 - 94230402 5847642 5847641 5847691 88382712 88382711 88382761 50 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCT ....x.................:.::.........x:x...:.::...:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 34556149 NA +3046 chr4 + 190214555 40413990 40413989 40414043 54 AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAAGAAAAGAAAAAGACGAATT chr4 - 94230402 37322393 37322392 37322446 56907957 56907956 56908010 54 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGACT .....:................:.:.:.:....x:..::..:...:.::.:.:. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 3091597 NA +8651 chr4 + 190214555 40423284 40423283 40423560 277 TTTAAAGAAAGCTTTATTTACTACATACATCCTAAGAATGTACTGTAAATGGAGCAAGATCTAAATAAA-----AGCTTTTCAAATATAAAGCAGCTAAAGTTA-ACTAAACCACTAGCAATG--------TTTGAAAACAGAAC-------TCTAAAACTTTTTTTTTACA--------------------TTTATATAGTTTGTTCTTAACACTAAAAAAAAAAAAAGTTCACATTTCAAGTTAT-AAACTTACCTC---AGTAGTGTACATGAAATGGTTTTGAAACAATAGGAACAGATAAGTCCCAGATAGGAGGCT chr4 - 94230402 23381899 23381898 23382203 70848200 70848199 70848504 305 TTTATAGAATGCTTTATTCACTATGT----CCTAGAAATGTACCGTAAATGGAGCAAGAACTAAATAAATTCAGAGGCTTCCAACAATACAGAAAACAGAGATACAATAAAACACCTAAAATATCAGCTCTTTCAAGAATAAGGCACACTAGTTTTGTGGTTTTTTTTAatatatatatatatatatatTTCTTTGTATAGTTTGTTCTTATCCT--------AAAGATGTTCACATTTCAAGTTATCAGACTTACCTCAGTAGTAGTGTACATGAAATGGTTTAGAAGAAAGTGGAAAAGATGG-----AGGTGGGAGGCT ....x....x........:....::.----....::.......:...............x.........-----..x:..:...xx...x..x.:x:.:..x..-.x....x...:x:x...:--------..::.:..:.:::.-------.:.x:x:x........x.:.--------------------...:...............x.x:--------...:.x..................-.:.........---......................x...:x..xx....x....::-----..:.:....... 26M4D39M5I30M1I18M8I14M7I20M20I23M8D24M1I11M3I43M5D12M 200/260 76.9% 305/94230402 0.0% 62/260 23.8% 17041385 NA +3041 chr4 + 190214555 40423627 40423626 40423723 97 TCATTTTTTTTTATTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTT chr4 - 94230402 15963339 15963338 15963435 78266968 78266967 78267064 97 TCAGTTAACTTAGTTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ...x..xx:..x:..x...:.x.x:..x...xx::..xx.x......:.......:.....:::::...xx..:...:...:xx.....x:...... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 24460288 NA +3047 chr4 + 190214555 40423627 40423626 40423714 88 TCATTTTTTTTTATTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570554 41570553 41570641 52659762 52659761 52659849 88 TTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT .:....x..x.:x....x::...:.................xx..:x:x.xx:::x...:::....:.xxx............xx... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% -1146927 -93083475 +3788 chr4 + 190214555 40423632 40423631 40423751 120 TTTTTTTATTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTCCTCT----TCTTCTTCTTTTTT chr4 - 94230402 45185615 45185614 45185739 49044664 49044663 49044788 125 TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCT ....:.xx...x...........::..:x...:.:x.:..::..........xx:....-:......:x...xx.x::.:..x:.x...x::.....xx.:x..:..----....x.......:. 59M1I47M4I14M 81/120 67.5% 125/94230402 0.0% 5/120 4.2% -4761983 -89468419 +3364 chr4 + 190214555 40423633 40423632 40423742 110 TTTTTTATTCTTTCTTTCTTTTTCTTTCTTTCTT----------TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT----TTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTCCTCTTCTTC chr4 - 94230402 23468147 23468146 23468270 70762133 70762132 70762256 124 TTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCC .....x..x.:..:...:.....:.:::......----------.:x.:....xx...x..:..::.:.x.....----.:::.x.:x......x:......x........:x.:x.:.:..:. 34M10I31M4I45M 74/110 67.3% 124/94230402 0.0% 14/110 12.7% 16955486 NA +40392 chr4 + 190214555 40424254 40424253 40426157 1904 AAAACGCAACTGCGTTTTACTTGCTACCTTATTGCACACCTCACTTCCTTGATTGAGCCTTTAAAAAACAATTCCA-AGTTGATATTTTTTTTTAAAAAGTAGATGACAATC--TTAACATTTTACTGTATTTTACATTCACT---CTGCTAAACAAAAGCCTTTAAACAGGC-ACAAAACACTGCAACAATACATTAACTTCCTAATAAAACAAACCTTTTT-----------------AATAACATTGAAATAAAATGGTTTCATTTTGCATTAAACTACATACCATGAACTTCTCCAACATAAAAGGACTAAAAACAAGCAT--TAGAAGATATTTACAAACT----ATCTT---TAAACTTCTACAGGTCTCTCCTCCTCCTCCTGGATGTGCACAC-----CCCAA----------TCCAGTTCACCCATCAAGTGCACAGCAAAGGAAGAGAGGCCCATT-TAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAAACATGGTAAGGCAACTAG-AAGCATAACT-----TTCTGCTGAAAAGAGTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAAAAATGAATAAAAGCA-------TTAGAAATGGCATTAAAGTTTTACATTGGGCAATTAAATAGCTATGCAAAGGTGTCTTATGCAA-----------CTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCACACGTAGAAGACAATACTTCCCCAACCAAACAAAAAAAAAAACAAAAAACAACGAAACAACAAACCCCAACAAAAACCCAGGAAGAAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAA--ACATTGCGGTGGGATTGGGAATCTGGGGAGGAGGGGACAGGGTGAGAGATGTGGGAGTGGGGGCATGTTTAAGGCTAAGGCACATGGAGAATGAGCCCCGGCTAACGGTGGCAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTAAGGAGAGATCCAGTGTTTAATTTCTTTTAAAAAATAGTACCGCCATGATGATACATGGTAACACCATCAACCCTTAATGCCAGCA--GAAATACAGAGGTTTTACTCATTTT-AAAATTGCACTTTCCAGTATAACCTTTA--AAATAATGCTTTATGTAGTATTTTT--------------------AAGCACTACTGTTTGTAT-CTTTAAATATTGTATATATTTTTCAAAATAG-------------TTCCCTAGCTCCTCAAGTGTGCTTTTTTAATATATAGTTGATATATTATTGAAGGTACTACAAAATAGAAATCTCTGGAGTGCAGAAGTTAA-GAAAATAACCTTCATACTGAAAATATATCCTTAAAAAAACAAC------------AACAAAAACCTCTATACAAATGTAGTACA--GCATACAAATTTTTAAAAGATGGAATGAAGGC-ACGAACCATTGCA----AGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTT--GAAAATAGTCTTAAAAAA-----CTAGTGAAAACTTCATGTATATAAAATAATTCAGAAATAAATCTGC-TAACATTCTTCACTTTCAGGTT--GCATGTGT-----GAATCC-----------------AACATGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGCAGGGAAGGCCTGAGGTATGTAGCCTGCGTATCCTCCATACATGGCGGC---------CGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTGTAGCTGGAGCAG------CAAATGGCACGTAACTGGCCCCGTAGATCCCGGCAGTAGGAATTCTCTGAACGTTTGGAGCCACCGTGTATACTGGAGTTATTGGGCGGCCCTGAGGAGAAGAGA chr4 - 94230402 23382899 23382898 23384702 70845701 70845700 70847504 1804 AAAGCGAAATTG---TTTACTCGCT-CCCTGCTCCACACCTCCCTTCACCG---GAGCTGT--------GATTGCAGAGCTGAGACACTTCATAAAATGGGCGA-GATATTTCTTTAACGTTTTACCATATATTACATTCACTGCACTGCTAAATAAAAGCCTTTAAACAGGCCACAAAACACTGCAATAATATATTTACTCCTTAATATAACAAACCTTTTTTTCTTTTTTTTTTTTTTAATAACATCGAAATAAACTGCGTTTGTTTTGTGGCAAACCACATACCGCGTAAATTTGCAACATAAAATGACTTTTAAAAAGTATATTAAAAGGTATTTACAAGCTCTACATCTTATTGAAACGGCTG-GGCCCGATCCCTCCCATCCCTGATGTGCACGCGGAGCTCCAGGTGCGGGAGCTGCAGTTGGTGCTGAAGGGAGGCCGGGAGGGACGCCAGCCCCGCTGTGTCAATTCCAGTATCACCACCACCCCC-AGTACCTCGGG-ACCTTCTCACGGGACGCGATGAAGCTATGGGTAAGCAGCACCGCGCATCCTGCTGCCAGGAGCGGCCGTGC-TCTTGCCTACAACAGCATACATTCTCAGTCACTACAG-CATATACTTCAAA---GGATAAAATAAAGGGCGTTTAGAAAGAGCCT--AGGTTTTATACTGGA----TGAAGATCGAAGTCGAGGCGCCTTACGCGAAGGATCCGGTGCGCGTTT------CTGCGCGTGCTCCAGGGCTGAAC----TACAGGTAG---------CTTC--------AATAAATAGGAATTCCAGTTGTTGGGGAACA-----------------CTCAG--------------------AGCCTTTCCTTT-GAGC---------ATCGTAAGCCTGCTAATCACACTGCGAAGGGCTT-----------------------------------CGCGTGCGGAGGCTTTCTT---------------------------------------------------CTTTCTGTTCCT----CCTACAAAGGCAATA--------------TGAATTA-------------CTTTTGATTTC-------AAGCAGTAACA-------AACAGACTGTA-------------TTAATGCCAGCACAAAAACGCAGAGGTCTTGCACGTTTTTCAGATTGCACGTTCCAGTATAACATTTCTTAAATAAGATACTTGGTGGTTTTTTCTTTTCTTAAAAAAAAAAAAAAAAATCTAAGGTATGTATTCTTTAAATATTGAATATATTCTTCAAAATATATCGTTTTAAACTTTCCCTAGCTGCTCGGGTGTGCTTCTT-AATATATAGCTGATATATTATTAAAGGCACTACAAAATAGACATCTCTGGAGTGCAGAAGTTACTAAAAATAACCTTCATACCACAAATATAT---TGAAAATATAACTGCTAAAAAAAAAAAAAAAGACCCCGTGCAACCCCAGTGCGATGCGTGTAAA------------GGCACGTAAGCGATGGGCGGCTGCATCGAGGTCGTTTAGAAATGTATGAATACAGGCATGTTAAATTTTAAAAATAGCCTAAAAAAAAAAAGTTAGTGAAAACTTCAAGCGTAGAAAACATTTTGAACATGTTTTTCTGTGACATTCTTCACTTTCAGGTTCTGCATCAGTTTACTGAGTCCTGACGTTACTCTCCTGCAGCAGGCGCGTTCTTCATAAATAGTAAAGTGTTCCTTCAGTGTTTGTTG----------CTCCGC------CGACAGTCTCAGTACGTCTGGTAGACGTCGTGGATGGGCACCTGGATGGTGGCAGCTGGGAAGGCCGGAGGTATGTAGCCGGCGTAGCCCCCGTAggcggcagcggcggcagcagcggcggcggcgTTCTTCTGTAGCGTGGCTATCGTTGCCGTTGCTGCAGCGGGTGCTGCGAATGGCACGTAACTTGTCCCATAAATGCCAGCAGCGGGGATCCTCTGCACGTTGGGGGCCATGGTGTACACTGGGGTTATGGGGCGACCCtg-gaataagaga ...:..x..:..---......:...-..:.::.x........x....x::.---....:x.--------:...x..-..:...x.:x:..:x.x...x:.xx..-..:.x.:--.....:......::...x...........---........:..................-..............:....:...x...:.:.....x.............-----------------........:........x..xx..::.....::x:....:.......::.x.xx.:.x..........x....xxx..x...:..--..:...:.........:..----.....---x....xx..:-:.x:.xx...::.:.x...:x.........:.-----:...:----------.x.....x::x.xxx.:.x:x:.x.x:.:...x.xx..x...::.-.:x:..x:x:.:.:.:x...x.....::-..x...x:..:-.x:..:x..x.::..::.:.:.:..x.:x:.-.....xx..:-----.:......xx.:...:xx.:.x.x-.....:....:.:.:..........:x...x.....:-.x:..........---.:......xx.-------.......x:..x.--.:......:.:...:----.:..x.x.x.x.:x:...:.:....:..:.-----------.x..x..------:..:..x.:...::xx:.....x----:...x....---------....--------..:...x.::..xx.x.:xx::x:x.:....-----------------.:...--------------------...:::..:x.:-....---------:..x..:..:...:..--...:....:x...x..-----------------------------------:.x.x.:..:...x.x:..---------------------------------------------------.....::x.x:.----.::.x..:x..:::.--------------..:x...-------------:x...:.....-------..::....x.:-------:.:.x.:x...-------------............--:...::.......:..:.x.:....-x.:.......x............x...x--......x::x:.xx..:..x....:--------------------..:xx...xx..x.....-............x.......:.........x-------------..........x...::........:..-.........:............:....:.............x.....................x-:................::x........---.:....x.:...------------..x....:x.:.::.:...x:x:...:.:--..:.::...------------..x.:.x.:..-.:.::.x::....----:...x...:............:::.......:...:..--:.......:..x......-----:..............x.::..x....:.x..:::.x..:xx.:.x:-.:....................--....xx..-----..:...-----------------.:..x.:x.x...............x...:............x.xx...----------..:..:------.:x...:.......:...............x.......x.....:....::.....x.........x.............x.....x..:..:..x::...:..---------x.....x..x..............:.....x.....x..:..x....x...:.------.:..............x.:...:..:..x..:....::..:..:.....x.....x..:....:x.....:.....:.....x.....:.....-.:.x...... 12M3D10M1D25M3D7M8D7M1I27M1D7M2I29M3I27M1I49M17I85M2I19M4I5M3I10M1D32M5I5M10I45M1I28M1D11M1D31M1I10M5I24M1D37M1D13M3D11M7I13M2D15M4D30M11I7M6D23M4D9M9D4M8D31M17D5M20D12M1D4M9D16M2I16M35D19M51D12M4D15M14D7M13D11M7D11M7D11M13D12M2I25M1I28M2I25M20I18M1I31M13I27M1D64M1I28M3D12M12I29M2I9M12D11M1I13M4I38M2I18M5I46M1I22M2I8M5I6M17I49M10D6M6D104M9I53M6I94M1D10M 1185/1623 73.0% 1804/94230402 0.0% 462/1623 28.5% 17041355 NA +3096 chr4 + 190214555 40430211 40430210 40430258 48 AACAAACAAACAAACAAACAAAAAAAGACAAAAACAAACAAAAAAAAA chr4 - 94230402 64558420 64558419 64558467 29671936 29671935 29671983 48 AAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAA ..x.......................:..x.......:::x.x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -24128209 -70102193 +3116 chr4 + 190214555 40430218 40430217 40430261 44 AAACAAACAAACAAAAAAAGACAAAAACAAACAAAAAAAAAACC chr4 - 94230402 33205671 33205670 33205714 61024689 61024688 61024732 44 AAACAAACAAACAAAAAAAAACCAATACCAAAAAAAAAAAAACC ...................:..x..x..x..x............ 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 7224547 NA +3111 chr4 + 190214555 40431042 40431041 40431089 48 AGCCTGGGTGACAGAGTGAGACTGTCTCAAAAAAATCAAAAATCAAAA chr4 - 94230402 65849949 65849948 65849996 28380407 28380406 28380454 48 AATCTGGGTGACAGAATGAAACCATATCTAAATAATCAAAAATCAAAA .::............:...:..::.x..x...x............... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -25418907 -68811495 +13116 chr4 + 190214555 40432622 40432621 40432879 258 AATGACAATGCCTGCAATAAGAACTCTACCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACAGCGGCTGCGGCGGCTGCGGCCGCGGCTGCGGCGGCAGCAGCACTGGCTGGGTCTGGCTGCACAGCAATGGGGCTGATCATGTGCTCCACTGTGTGGATTTTGCCATCTTCAATCATTTTAGGGGCTGGAGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGCAAGAGAAGCAAGA chr4 - 94230402 23385483 23385482 23385728 70844675 70844674 70844920 246 AATCAGGGTGTCTGCACT--GAACTC-ACCTGGAAGGGGGGAGGCGTTGACACAgctggtattac------tgctgcggctgcggctgc---tgcagcagctgctgcACTGGCTGGGTCCTGCTGGACGGCAATAGGGTTGATGATGTGCTCCACTGCATGGATTTTGCCATCTTCCATCATCTTGGCTGGCGGTGCAGCCGGAAACATGGAGTACTGGGCACCGATTGCAGGGATGGCCACTAGGAGAGAGACCAGA ...x.x::..:.....x.--......-........:..x..x.....:.......:x..x..x..------...x...........:..---...:..:..x..x..............:x....x..:.....:...:....x.............::.................x.....:..:.xx.x:..x..x..:...........:.....:..x..:..x...........:...:x:.....::.x... 18M2D6M1D38M6D18M3D166M 195/246 79.3% 246/94230402 0.0% 12/246 4.9% 17047139 NA +3043 chr4 + 190214555 40434686 40434685 40434727 42 CAGAATTTTTACACAGGCAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 21136957 21136956 21136998 73093405 73093404 73093446 42 CAAAACTTTTACAAAAGCAAAAAAAAAAAAAAAAAAAGAGAA ..:..:.......x.:.....................:.:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 19297729 NA +3110 chr4 + 190214555 40436159 40436158 40436227 69 GAGACTCTGTCTCAAAAAAAAAAAAAAACAAACAAACAAACAAACAAAAAAAAACCTTACTCAGGCAAG chr4 - 94230402 65284338 65284337 65284405 28945998 28945997 28946065 68 GATGCTCAGTC-CAAAAAAAAAAAAAAAAAGCCTAACAAACAAACAAACAAAAAACCCATCTTAACAAG ..x:...x...-................x.:x.x..............x.....x.::.:::x::.... 11M1D57M 51/68 75.0% 68/94230402 0.0% 1/68 1.5% -24848179 -69382223 +3103 chr4 + 190214555 40436163 40436162 40436206 44 CTCTGTCTCAAAAAAAAAAAAAAACAAACAAACAAACAAACAAA chr4 - 94230402 4615242 4615241 4615285 89615118 89615117 89615161 44 CTCTCTCTTAAAAAACAAAAACAAGAAACAAACAAACAAACAAA ....x...:......x.....x..x................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 35820921 NA +3337 chr4 + 190214555 40436163 40436162 40436221 59 CTCTGTCTCAAAAAAAAAAAAAAACAAACAAACAAACAAACAAAA-AAAAACCTTACTCA chr4 - 94230402 81661600 81661599 81661659 12568744 12568743 12568803 60 CTTTATCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTTCCCA ..:.:..::x.........x....................x....-.:..:....x.:.. 45M1I14M 48/59 81.4% 60/94230402 0.0% 1/59 1.7% -41225437 -53004965 +17513 chr4 + 190214555 40436431 40436430 40436692 262 TCATACTGACCTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTCGGCACCAGTTCATATCCTTTTTCTTGCTGCTTTCCTTTCCCTTCATGATATCGGCTATATATACCACGACCAGCAGAATATCCCCCGAGGTAGGAACCCCTAGGCCCTGGGGCTCTGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACAC---AAAAGATGATCAGCAACCAACAGTGACGG chr4 - 94230402 23388032 23388031 23388296 70842107 70842106 70842371 265 TTGTACTGACCTGCACCAGGCTTAATGGCCACTGGGTTGACAGCAGGTAATTCCAGGTTGGGTACCAGCTCGTATCCTTTTTCTTGCTGTTTTCCTTTGCCTTCATGGTACCTGCTGTATATGCCGCGGCCAGCAGAGTATCCCCCCAGGTAGGAGCCACGGGGGCCTGGGGCTCTGTTGCCGGCTGCGCCTCGCCCTCTACCTCGTATGCTGCCTGCTTATGATAACAACATAGAAAAAGATGGTGAACAACAAACAGTAGCAG .::..........:......:........x...........:.:...x.x.....::..x..:.....:..:.................:........x........:..:.x...:.....:..:..:........:........x........:..x.x:..x.................:.....:..........x:....x..............:.:.........:---........:.x.:....x......::.:. 233M3I29M 216/262 82.4% 265/94230402 0.0% 3/262 1.1% 17048399 NA +3175 chr4 + 190214555 40437070 40437069 40437124 55 TCTCAAAAAAAAAAAAAAAAAATATATATATATATATATATAAAATACATATATA chr4 - 94230402 69437735 69437734 69437789 24792614 24792613 24792668 55 TTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTA .:.x.........x........:x..................xxx......x:.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -29000665 -65229737 +3039 chr4 + 190214555 40437094 40437093 40437146 53 TATATATATATATATATAAAATACATATATATATATATAAAATACATATATAT chr4 - 94230402 76561957 76561956 76562009 17668394 17668393 17668446 53 TGTATATATATGAGTTTAAAACATATATATACATTTAAAAAATACATCTATAT .:.........:x:.x.....:.:.......:..x..x.........x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -36124863 -58105539 +72255 chr4 + 190214555 40437762 40437761 40438944 1183 CCCACTAACCTTTCACAAAGTAGTCCCTGTTGGGCCCAATGAGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTGTGTAGGGGTCGCAGGAGTACACGTAGCTGGGCTGCTGCGCTGCCTCAG------CCGCGCCGCCGCCCCTGGCTGCCTTCTGGTAGCGCGAGTACTGCTCCTTGTCCACGGGCTTGGCCAGCGTGACCTCCAGGCACGAGCCCTCCAGCTCAGTGCCGTTGAGGTTGTTCATGGCATGCACGGCATCCTCGCGGCTGGTGAAGTGCACGAAGGCGTAGTCGCGGATCTTCTTGACGCGCTCCACGCAGCCGGGGTTGAACTGGCCGAAGCTCTTCTTGATGGTGTCCTCGGTGGTCTCGATCATGAGGTTGCGCACGTAGAGGATCTTCACGGTCTCCATCACGTCCTCGTCCACGTCGATCTCAGGTTCGGCCCAGTCCACGGCGATCTGGTGGCCCCACAGCTGGATGCGGCCAGGCATGAGCTTGCGGCGAGCCATGGCAGCCGCGCGGTGGCTCTCGTACTCCACGAAGGCGAAGCCGCGGTTCTTCATCTTGTCGGCCGCGCTGGCGTAGACGATCACGTCCAGCACGCCCTCGGTGACCTTGGCAATCTCCTCCAGGATTTCCTCGCGCTTCTTCATCTTGGGGATCCCGCCGATGAAGAGGCGGCAGTTGTCCACGCTGCAGCACACGCCGAGCAGGCGGCCCGGGCGGATCTCGTAGTTGTTGAGCTCACGCACTGCGCGCTTGGCCTCGTGCTTGTGGCAGTACATGACGAAGGCGTAGCCGCGGTTCTTGCCGTCAAAGTCCATCATGAGGCGCAGCTCGTAGATGCGGCCCACGGCCTCGAACACGGGCACCAGCTCGTCCTCGTACACGTCGCGCGGGATCTTGCCCACGAAGACCTCGCAGCCACGCTGCGGGTGCGGGCCCTCCCAGCCGGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATGCTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGCTGCCTCGTTGGGCGCGCCCGCCACGCCCTCGGGCACCTTGGCGGAGGACCCGGCGGCCGAGTCACTGCTCATGGCTGCGGTGGAATCCTCTGCGGTCATAATGTCAAAGGCATCCACAGCTGGCGGAAACCTGGGGAAGCAGAAAGAAGC chr4 - 94230402 23389591 23389590 23390777 70839626 70839625 70840812 1187 CTTACTAACCTTTCACAAAGTAATCTCTGTTGGGCCCTATCAGGGCATTGTATGGATATCCATAATATGCTAGTGTGTATGGATCGCAAGAGTAAACATAGTTAGGTTGCTGAGTTACTTCGGGTGTTGCTGCAGCCCCTCCTTTTGCTGCTTTCTGGTAGCGAGTGTACTGCTCCTTATCCACTGGCTTGGCCAGGGTAACCTCCAGGCACGAGCCTTCCAGTTCGACACCATTAAGGTTATTCATGGCGTGGATGGCATCTTCCCTGGTTGTAAAGTGCACAAAGGCGTAATCACGTATTTTTTTCACCCGCTCTACACAGCCAGGGTTAAACTGCCCAAAGACCTTTTTAATGGTGTCCTCTGTGGTCTCAATCATTAAGTTCCTCACATAGAGGATTTTAACAGTCTCCATGACGTCTTCGTCCACGTCTATCTCTGGTTCTGCCCAGTCGACAGCAATCTGGTGTCCCCACAGCTGGATCCTTCCTGGCATGAGCTTCCTCCTGGCCATTGCTGCTGCTCGATGGCTCTCGTACTCCACAAAGGCGAAACCCCTGTTCTTCATCTTGTCTGCAGCGCTTGCATACACAATGACATCCAGTACACCTTCCGTCACTTTAGCGATCTCCTCCAGGATCTCCTCTCTCTTCTTCATTTTGGGAATGCCTCCGATGAAGAGCCGGCAGTTGTCTACGCTGCAGCACACACCCAGCAGCCTGCCTGGGCGGATTTCGTAGTTGTTCAGCTCCCTGACAGCCCTCTTTGCCTCATGCTTCTGTGTGTACATCACAAAGGCATAACCACGGTTCTTCCCATCGAAGTCCATCATCAGGCGCATCTCATAGATGCGGCCAACAGACTCGAACACAGGGACAAGCTCATCTTCGTAGACGTCGCGGGGTATCTTGCCCACAAAGACTTCGCAGCCACGAGGAGGGTGCAGGCCGTCCCAGCCAGGCGGTGGGCCGCCGTACTTGCGTTGCCCGTTCTCCTGGATCATGCTGTAGCCGGTGCGCTCCATCAGTGCCAGCAGGGCCGCCTCGTTGGGCGCACCGGCCACTCCTTCAGGGACCTTCGTGGTGCTCACGTTGGTGGAATCGTTGCTCATCCTTGCAGCGGAGTCCTCAGCGGTCATGATGTCAAACTCATTCAAAGCCTGATAAAACCTGGACAA--AGGAAGAAGC .::...................:..:...........x..x..x..:.....x..:..x..:..:..x..:........x..:.....:.....x..:...:.:..:.....x.:.:.:..:.------.:..:x.x..x..::.x.....:...........x.x............:.....x...........x..:.................:.....:..::::..:..:.....:........:..x.:......:..x.x.x.x..:........:........:..:..x..:..:..x..x.....:..:.....:.....:.....x..:...x:...:..:...........x........:.....x.:...x.x...:........:..x..:........x.....:...........x.....x.....x........x..:..:........x..............x.xx..x...........x.xx.x:.....x..x..:..x..:.................:........:..x.x...............x..x.....x..:..x..:..x..:.....:..:..:..x..x..:..:..:..............:.....x.x.........:.....:..x..x...........x...........:..............:..x.....x.x...:........:...........x.....x.xx..x..x.x...x.....:.....x..xxx......x..:.....:..:..:........x..:..:...........x.......x...:...........x..:.x.........:..x..x.....:..:.....x........x..x...........:.....:...........xx.x......:....x........:.......................:...........:..x.:............x..............:........x..:..............:..x.....x..:..:..x.....x.:..x.xx.x..x:..:x..:..::.......xx:...:.:...:.....x........:........xx...:..x...:x.xx:........:x..--..:....... 123M6I1048M2D10M 944/1181 79.9% 1187/94230402 0.0% 8/1181 0.7% 17048171 NA +3082 chr4 + 190214555 40438712 40438711 40438797 86 CCGGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATGCTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGCTGC chr4 - 94230402 72726601 72726600 72726686 21503717 21503716 21503802 86 CCTGGTGGAGGCCCACCAAATTTTCTTTGCCCATTTTCTTGAATCATGTTGTATCCAGTCTTGTCTAGTAGGGCCAGTAAGGCAGC ..x..:..x..x..:..:x.:..x.x:.....:..:.....x.:....:....x..x..x:xx..:.x:..x.....:.:x..x.. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% -32287889 -61942513 +3249 chr4 + 190214555 40452780 40452779 40452870 91 GCTTGACACTTAAAAGACAATAAATATTTGTCAAATAATTAAATGGACTGTGATTTCCTTCTTTTTTTTTTTTTTTTTTTTTAAGACAGAG chr4 - 94230402 67837378 67837377 67837455 26392948 26392947 26393025 78 GCTTGACA-TCAGAAGGCAACTA------------TAAGTATCCAAAATGTGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG ........-.:.:...:...:x.------------...x..xx:::.x.........x..x.:...................:...x.... 8M1D14M12D56M 61/78 78.2% 78/94230402 0.0% 13/78 16.7% -27384598 -66845804 +3145 chr4 + 190214555 40458734 40458733 40458813 80 TTCCAGCTCTGGTGATAATTGTTTTTTTTTCCCCCTTTTCTTTTCTTCCTTTTTTGGGTACACAGTGAAAAACAAAAAAA chr4 - 94230402 42926897 42926896 42926972 51303431 51303430 51303506 76 TTTCAGC----GTGCTAGTTGTCTGTATTTCTTCCTTTCTTTTTCTTTCTTTTGTTTGTGGGTATCAAAAAGCAAAAAAA ..:....----...x..:....:.x.x....::.....::.......:.....x.xx..:x::.x::....:........ 7M4D69M 54/76 71.1% 76/94230402 0.0% 4/76 5.3% -2468163 -91762239 +16719 chr4 + 190214555 40473985 40473984 40474338 354 CTTTGTGCACTGACATTTGACCC-TTTTTATAATATGCACCTTGTACCAGTGAAACCTAAGGCACCAGTTAGTTACTCATTAAACTTGGGTGCTGAGGGCTGACTTGTACAAATTACGCTGTTAACTGCCCAGCCTGGCCTCTGTGCAGAAGTGGAAA------AAAGCAATCATCATAGCTGTGAAATTCTGTCATATCGGCAGAATTGAACTACAAATTGCAGCAATTCGTACCTGACCTCTGATCTGTGAAGTTAGTCTAAACCTTTGAACCTTAGCTTGGAACCGAGAAGCAGCACTGACTTATAC-AGGACAAGGTGGCTAGCAAGCGTTCTCCATCGTGAATAGTTAACACTGTGA chr4 - 94230402 23399568 23399567 23399920 70830483 70830482 70830835 353 CTTTGTGCACTGACATTTGACCCCTTTTTATAACGTGCACCTTGCACCACTGAAACT--------CAGTTAGTTATTTATTAAACTCAGGTACCAATGGCTGGCTTGTACATATCACCCTTTTAACTGCCTGGCGTTGCCCGTGTACGGAGGAGAGGGGGATGGAAGGTAATCATCTCTGCTGTGAAATTCTGTCATATCGGCAGAACGGAGCTGCAAAGTGCAGCAATTTGTACCTGACCTCTGATCTAAGAGGTCTGTTCAAACCTTTGTACCTTGGGTTGAAATTGAGAAACAAGGTTTACAAGTACAAGGAAGAGATTTCCAGTACTCGTTACCCGT-GCTCAGGGttaatattataa .......................-.........::.........:....x......:--------..........:.:........::...:.::.x.....:........x..:..x..x.........::..x.x...:x...:.:..:.x.::::------..:.:.......x:x............................:x..:..:....x..........:..................:x..:..:x..::.........x.....:.x...:..::.....:..:x::.x..xx:...-....x:..:.xx.:..:.xx....x:..:.-.:xx.x:.....:.:.:.:. 23M1I33M8D93M6I146M1I30M1D20M 259/345 75.1% 353/94230402 0.0% 17/345 4.9% 17074417 NA +7407 chr4 + 190214555 40475674 40475673 40475995 322 CAAATAAGGTTTCCCCTACCTTTCCAATCTTG--ATCTGGGTGCGACAGGCTAACTGTAATGAAAGCTT-TGCTT------AAGCAACCTTCGCTCCCAATACCAGGAGCTGTGTAACTCTGTTATACATGGCACAGGGCT---------CCTCATTGGTCAACGAAATGAGCTTTGGCCACTTAA-TGCCTTGGGAGTCATTTGCTAAGGGCACCTGGAATGAGCTTGAGTGGGTGGTACAGAA-AGAAGGGAGGTGTTAAAACTGCC--ACAAAGATAATGCTCAACAGCAACCTGAAACGGAATGGAAACCCTACTGTAACTGATGGATTTGGGGAAGGCT chr4 - 94230402 23401585 23401584 23401905 70828498 70828497 70828818 321 CAAGCAGCATTTTCCTTACCACCCTGGTCCCACAGTCCGAGTGCAACAGGCT---------GAGGGCTCGCGCTTCCACCAGAGCAGCCCTTCTTCCTAATGGCACGAGCCGTGCGAC-CTGCT--------CACGGAGTTTATGCATTGCTTTATTGGTCAG-----TCAGCGTTAGCCATTTAAATTCCTTGGGAGTCATTTGTTAAGGGCTCTCGGGCTGAGGCCGAGTGGGTGGGACAGAAGGGAACGGAGAAGTGAGCGCTGCCAGACGCCGAGAGCTCTTAGTGGCAGCTTGAAAGTTAATCGCAAAAAGTACGAAGCTAATGGGTTTTGAGAGGGCT ...::.:x:...:..:....x::.:::..:::--:..:.:....:.......---------..::...:-:....------:....:..:.:x:...:...:x..x....:...::..-...:.--------...:.:.:.---------.:.:........:-----.x...x..:....:....-.x................:.......x.::..:x....x::..........x......-:...x....:x..x.:x:.....--..:xx..x.::x..:.:::...:.:.....xxx...x.x..xxxxxx:.x.:..:....:...x.:..:.... 32M2I18M9D8M1I5M6I37M1D5M8D9M9I13M5D18M1I58M1I23M2I73M 200/299 66.9% 321/94230402 0.0% 45/299 15.1% 17074089 NA +3907 chr4 + 190214555 40479718 40479717 40479793 76 GTCTAGAACTCCTGGGCTCAAGCGATCCTCCTCCCTCAGCCTCCTAAGTAGCTGGGACTACAGCTGCACCATTGTG chr4 - 94230402 18197131 18197130 18197206 76033197 76033196 76033272 76 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG .:.:.:.:..:.....:.....:.x.:.x.xxxx........:::..........:......xx.......:.... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 22282587 NA +3158 chr4 + 190214555 40519571 40519570 40519688 118 ACAGGTGTGAGCCACCACACCCAGCATCCTTCAATCCTTTACCTTGGTCTCCTCACCCTCCTCTCCCACTTCCCTCTACCCTACCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 8439344 8439343 8439446 85790957 85790956 85791059 103 ACAGCTACCAACAACCACAACAGCCATCTTC-------------TGGGTTTCTCCCCATGTTCTGTT--CTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAA ....x.::x.:.x......x.x:x....:.:-------------...x:.:...x..x.x:...x::--:.....:.:...:x.:.:...:......:..........:..:....:. 31M13D23M2D49M 69/103 67.0% 103/94230402 0.0% 15/103 14.6% 32080227 NA +3732 chr4 + 190214555 40523041 40523040 40523143 103 CTGCAACCTCTGCCTCCGGGGTTCAAGCGATTCTTATGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGCATGCGCCACTATGCCTGGCTAATTTTTGATATT chr4 - 94230402 18197126 18197125 18197226 76033177 76033176 76033277 101 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTATCATCCTTTCATGACATT ..:..:..:xx:x..:.x.........:.x...x:.x.x........::...........:.:..:.--.:...:.....:..:x.x:::xx..:x...:... 67M2D34M 67/101 66.3% 101/94230402 0.0% 2/101 2.0% 22325915 NA +3352 chr4 + 190214555 40524696 40524695 40524769 74 CTGCAGCCTTGACCTCCTGGGCTCAAGCAATCCTCCTGCTTCAGCCTCCTGAGTAGCTAGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.....::x.:.x.xx.x:.......::::.......:.:......x.:.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 22327570 NA +3900 chr4 + 190214555 40532086 40532085 40532156 71 CTGCAACCTCTACCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAAGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx.x..:...........x.x...x.xx.x........:............:......x... 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% 22334960 NA +3457 chr4 + 190214555 40538402 40538401 40538475 74 CTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGTCCCAGCCTCCCAAGTAGCTGGGACTAGAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:.........:.x...x.xx.x.:......::...........:....x.x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 22341276 NA +7715 chr4 + 190214555 40546611 40546610 40546819 209 ATCATTTGTTCCAAAGTTCTTCCCAAT--GCAATGGCCAAATTAACTAAGGTTGAGCTTCTGATTAACATAC-AGTGCTGGAAGGAACTTTGACCCACAGAAACCTGGCATTTGACTTGCTTCGGTGAGTCCAACCTGTGTCAC-GAGTGCCTGTTTCAAGGGTAATAAAGGACCTGGCTGTTTGCTTACAGCAAATGGAGGTGGTGCCATGT chr4 - 94230402 23427731 23427730 23427941 70802462 70802461 70802672 211 ATCATCTGGTCCAAAGTTCCCCACACTCTGCTTTCACCGA--TAACTGAGGGCAAGTTTGTGATTAACGCACCACTGCCAGAGGGAACTGTGACCCACAGAAACTTGGCATTTTGTTCTCCCCTCGGTGTGCAACCTTTATCACAGAGCATAGGGTTCAAGGGCAACGTAACACTCGAGTATTTACTTACTGCAAATGGAGGAGGTGCTGGGT .....:..x..........::.x..x.--..xx.x:..:.--.....:...x::..:..x........::..-.x...::..:......x..............:........x::.:x.::.xxx.x..x......x.:....-...:::xx.x........:..::x.:x..::.:x.:...:.....x...........x.....::x.. 27M2I11M2D30M1I71M1I68M 145/207 70.0% 211/94230402 0.0% 6/207 2.9% 17118880 NA +3533 chr4 + 190214555 40573760 40573759 40573863 104 AGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGA----GAAAGA----------AAGAAAAAGAAAGAAAGAAAGAAA----GAAAGAAAGAGAAA-----GAAAGAAAGAAAAATAAACTTTG chr4 - 94230402 30533164 30533163 30533290 63697113 63697112 63697239 127 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTG .:.x.:.:..:..........::.:.:......:...----....:.----------....x.....xx....x.:.::..----....:.........-----.:..:::...::......x.:.. 37M4I6M10I24M4I14M5I23M 77/104 74.0% 127/94230402 0.0% 23/104 22.1% 10040596 NA +3358 chr4 + 190214555 40576647 40576646 40576719 73 CTGCAGCCTCAAACTTCTGGCCTCAAGTGATCCTCTTGCCTGAGCCCCTCAGGGTGCTGGGATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x..:.......x:.......x.:.x.xx.x..x....::...:.xx.....:.:....x..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 22379521 NA +3159 chr4 + 190214555 40583383 40583382 40583439 57 TCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAACAGAAGCTGGACAAGGTGA chr4 - 94230402 42638421 42638420 42638477 51591926 51591925 51591982 57 TTTCAGAAAGGAAAAAAAAAAAAAAAAACAATCAGAAAGAGAAGGTGGAGAGGCTGA .:.......::.................x..xx:....x.....x....x.:.x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% -2055038 -92175364 +3188 chr4 + 190214555 40583858 40583857 40583916 59 AAAAAAAAAAAAACAAA--AAACAAAAAACAAAAAAACCAAAAAGCAGAATGATTAAATAT chr4 - 94230402 91489913 91489912 91489973 2740430 2740429 2740490 61 AAATAGAAAAAAATAAATAGAGCAAAAAAAAAAAAAACCCAAAAACAGAATGAGAGAATAT ...x.:.......:...--:.:.......x.........x....:........xx:..... 17M2I42M 48/59 81.4% 61/94230402 0.0% 2/59 3.4% -50906055 -43324347 +3129 chr4 + 190214555 40586927 40586926 40586998 72 GCATGACCTTGGGCACATCACGTGATTTCCTCGGGCCTTAGTGTTCTCATTTATAAAATGAGGGGTTTAGTA chr4 - 94230402 31511960 31511959 31512031 62718372 62718371 62718443 72 GTGTGACCTGGGACGAATCACTCGGCTTCTCTGTGACTTAGTGTTGCCATCTGTGAAATGAGAGTTTTCATA .::......x..:.:x.....x:.::...:::.x.x.........x:...:.:.:.......:.x...x:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 9074967 NA +3249 chr4 + 190214555 40592914 40592913 40593014 101 AATCAATGCAAACAATTTGGGACATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681906 56681905 56682004 37548399 37548398 37548497 99 AATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTG--TTTTGTTTTTTTTTG ...:x..::.x.....x.xxxx..:.....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x--....x.......... 84M2D15M 69/99 69.7% 99/94230402 0.0% 2/99 2.0% -16088992 -78141410 +3046 chr4 + 190214555 40592927 40592926 40593017 91 AATTTGGGACATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 71863015 71863014 71863105 22367298 22367297 22367388 91 AAATTGTTGTAAATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCTGCTGGAGA ..x...xx::.x....x...x.:x.x..:x....x....:.:x.:x.x...:x...:.x...:.x................:.x:.x.... 91M 61/91 67.0% 91/94230402 0.0% 0/91 0.0% -31270088 -62960314 +3008 chr4 + 190214555 40592937 40592936 40592990 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 31911007 NA +3222 chr4 + 190214555 40592939 40592938 40592992 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 31911009 NA +3014 chr4 + 190214555 40592941 40592940 40592999 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -2164914 -92065488 +3388 chr4 + 190214555 40592943 40592942 40592996 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 31911013 NA +3068 chr4 + 190214555 40592944 40592943 40592999 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -52142404 -42087998 +3282 chr4 + 190214555 40592946 40592945 40593001 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -52142402 -42088000 +3258 chr4 + 190214555 40592948 40592947 40593012 65 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 35727494 NA +3496 chr4 + 190214555 40592948 40592947 40593003 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -52142400 -42088002 +3282 chr4 + 190214555 40592950 40592949 40593005 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -52142398 -42088004 +3068 chr4 + 190214555 40592952 40592951 40593007 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -52142396 -42088006 +3121 chr4 + 190214555 40592952 40592951 40593005 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 36392678 NA +3053 chr4 + 190214555 40592954 40592953 40593029 76 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCT chr4 - 94230402 92735348 92735347 92735423 1494980 1494979 1495055 76 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTGGCT .::....x.....:...:..:.:....x.x.x......:.x.........:.x...:::...:x.xxx:.x..... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% -52142394 -42088008 +7645 chr4 + 190214555 40597995 40597994 40598159 165 AACTCCACAAAACGGAATCTTTTTAAGGCAGGGAGCTATAT----TAAGTCTCCAACATTCACTTTCTGAAAATTCTTTAGTGTATTATTGCATAGCAGAGTAGTGTGACAAGGATCAAAAGATTAGAAACAATTTCAATTAACTCCTTCTACT--AATATACAGAGGACT chr4 - 94230402 23444052 23444051 23444222 70786181 70786180 70786351 171 AACTCCCCATTCCTTTATTTCTTTCAGCCAAGTAGGTGAGTACTGCAAGTCGCCAGCCTTTGCTTTCTGGAAATTCTTCGGTGTATTACTGCATAGCAGAGTGGTGTGACAAGGATAAAGGGATTAGAAGTAATTTCATATAACTCCTTCTGTCAAAATCTGAAGAGGGCT ......x..xxx.xxx..:.:...x..x..:.x..x.:x:.----:.....x...:.x..::.......:........::........:.............:.............x..::........::.......xx...........:::--...x.:x.....:.. 41M4I109M2I15M 123/165 74.5% 171/94230402 0.0% 6/165 3.6% 17153943 NA +3236 chr4 + 190214555 40604792 40604791 40604865 74 CTGCAACCTCTGCCTCCGGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTTGCTGGGACTACAAGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.x.........::x...x.xx.x........::::...x.....:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 22407666 NA +3147 chr4 + 190214555 40606193 40606192 40606255 63 ATCTCAAAAAAAAAACAAAAAAGAAAGAAAGAAAGAAAAAGAAAAATATTAAATGATGATGTA chr4 - 94230402 30013188 30013187 30013250 64217153 64217152 64217215 63 ATCTTAAAAAAAAAAAAAAGTTTGAAGTAAAAAAGAAAAAGAAAAATATTTGAAATTGATTTA ....:..........x...:xxx:...x..:...................x:.x:x....x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 10593005 NA +3044 chr4 + 190214555 40606211 40606210 40606251 41 AAAAGAAAGAAAGAAAGAAAAAGAAAAATATTAAATGATGA chr4 - 94230402 42837561 42837560 42837601 51392802 51392801 51392842 41 AAAAGAAAAAAGAAAAGAAAAAGAAAAATACTGAACGATGA ........:..::.................:.:..:..... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -2231350 -91999052 +3081 chr4 + 190214555 40611728 40611727 40611765 38 CAAAAAAAACAAAAACAAAACAAAACAAAAAAAACCAC chr4 - 94230402 65712181 65712180 65712218 28518185 28518184 28518222 38 CAGGAAAAACAAAAACAAAACAAAACAAAAAAACCCAC ..::.............................x.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -25100453 -69129949 +3058 chr4 + 190214555 40611729 40611728 40611779 51 AAAAAAAACAAA--AACAAAACAAAACAAAAAAAACCACCCACATAGAATCAT chr4 - 94230402 25002886 25002885 25002938 69227465 69227464 69227517 53 AGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCAT .:..........--....................x....x..:.x.:x..... 12M2I39M 44/51 86.3% 53/94230402 0.0% 2/51 3.9% 15608843 NA +3052 chr4 + 190214555 40611732 40611731 40611766 35 AAAAACAAAAACAAAACAAAACAAAAAAAACCACC chr4 - 94230402 73067604 73067603 73067638 21162765 21162764 21162799 35 AAAAACAAAAACAAAACAAAACAAAAAAACCCACC .............................x..... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -32455872 -61774530 +3177 chr4 + 190214555 40616834 40616833 40616886 53 CTCACAAGGAAATCCACTGTTTCATCTTATATTTTCTTTTCTTTTTTTTTTTT chr4 - 94230402 52451206 52451205 52451258 41779145 41779144 41779197 53 CTAACAAGGAAATTACATGTTTCATCCTCTCTTTTCTTTTTTTCTTTTTTTTT ..x..........:xxx.........:.x.x.........:..:......... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% -11834372 -82396030 +8877 chr4 + 190214555 40624596 40624595 40624845 250 TAGTACATAAAA---CAAAAACAACAAAAAC----------ATTAGGCCATTGCATTTTCTGTTAATAAGAAGTTGCAGTGCCCCATTAAATTTTCTGTGTCACCAAAGCCTCC-CAGTTGTAGTTACACAAAGGCAACTTTGTCTTGAGAAGGCTACTGGGAAGATGGGCCTAATCTTGGCAAGGGCTTGGTGTACCAAGAACCATGTTATT------------ATTTTTTAATCAAATGACAA----CACA---------CAAAAAGAAATATTATTTAAGCCATCT chr4 - 94230402 23455630 23455629 23455918 70774485 70774484 70774773 289 TGGTAAATGAAAGGCCAGAAAGGACAAAAATGCCCTCAAATATCAGGTAGTCGGTTTTGCAGTTATTAAGAAGTTGCTTTGCCCTGTTGAGTTTACTGTGTCATCAAAACTCCAACAGCCACAGCTATACAAAGCCTACATTGTCTCTGCAAGGCTACTGAGAAGATGTTCCTGATCTTGGCAAGAGCTAGGTGTACCCAGAAGTATTTTATTGGaaaaaaaaaaaaaaaacaaacaaaaaacaaaaaCCACAAAACACAACCAAAGAGAAATATTATTTTAGGCCTCT .:...x..:...---..:...x:.......:----------..:...:x:.:.xx...x.x....x...........xx.....::..:.:...x........:....:.::.x-...::::..:..:......x.x..x......:x:x..........:.......xx...:...........:...x........x....x:..x.....------------.xxxxx:..x....x:....----....---------....:.............x..x.x... 12M3I16M10I73M1I98M12I20M4I4M9I27M 185/250 74.0% 289/94230402 0.0% 39/250 15.6% 17168966 NA +9596 chr4 + 190214555 40629690 40629689 40630105 416 CTCTATCCCAAGCTGCACATTCC-------------ACAGTGGAAAGCGGGAGCGGCGACCCGAA--GGCAGCGAAGTTCTCTCGGGCTCAGCTCCCGAGGCCGGG------------AGCGCGCGGCGGTTCCAC-CCGCAGAGCGGCGCCGCGTCCCGGCTGCGTGGGGCGCTGCGCACGGGAGCGCTCAGCGTCTAGTCTGCGGGCCCTTCCCGGTTCCCTCCCTCTCTCCTCCCGCCGCCCGCCCCCTGCCGAGGCCATCCGC-CTCACAGTAGCAAGGTTGTCTCTCGTCTACTCCCTTCCCTTAAACTCACCAAACCAGATTTTTACTCCCAACACCGGCAACTTCCCGTAAATCTGCCCTGAAATTTTATCCTGCTGGCTGAGCCTCCCCTGGCTAAAGGCCAGTGCCACATTCCTGTTGTTTTTTAGGAGCGCAGAT chr4 - 94230402 23458495 23458494 23458902 70771501 70771500 70771908 408 CCCTGCGCTAAGCCGCACATTCCTGCGCGAAGCGGAGCGGCGCggagctggggctg-gaccgggaccgggaccggggtt-----gggctgaga--ctggggccgggctgggactggggAGCGCTCGCCTCTTCCCCGCTGCGGAGCT-CAGCGCGCTCCCGGACCCCGGGGAGTAAAAGCCGGGATCTCCC------TCAGCTCCGGGCAGGTTTTATTTTTTGTCGTGTCCCCCCCCTCCTCCTCCCCTTCTCC--------CCGCGCTCACAGTAGCAAGGTTGTCTCCTGGCTACTCCCTGCCCC-AAACTCACCAAACCAGATTCTTACTCCCAACAC------CTTCCCGTAAATCTGAAGTGAAACGTTACCCCGC--GCTGAGCCCTGGCTGGCGCCCGGCCAGTG---CATTCCTCTTG--TTCCAGGAGGGCAGAT .:..::x.:....:.........-------------:.:.:.x::...x..:..x.-....x.:.--..x.x..::...-----.....x..x--.:.:.......------------.....x..x.xx....x.-.:..:....x-.:x....::..x.xxx.x:....x.:x:x:xx.....x.x.:.------.x:x..x.....xxx.::::x..:::x:.x.x..:..:...x..x..:x...:::x..--------....-......................::.x.........x...:-...................:.............------...............xxx.....:x...:..:..--........::xx.....xxxx........---.......x...--..::.....x...... 23M13I20M1D8M2I12M5D9M2D11M12I18M1I10M1D43M6D58M8D4M1I40M1D33M6D34M2D29M3D11M2D16M 271/379 71.5% 408/94230402 0.0% 66/379 17.4% 17171195 NA +3017 chr4 + 190214555 40634787 40634786 40634820 34 TTTATTTTGTTTTTGTTTGTTTGTTTGTTTTTAC chr4 - 94230402 75653049 75653048 75653082 18577321 18577320 18577354 34 TTTATTTTATTTTTGTTTGTTTGTTTGTTTTTAC ........:......................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -35018262 -59212140 +3265 chr4 + 190214555 40638346 40638345 40638439 94 AGGAAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGGAAGGAAGGAAGGAAAGAAAGAGAAAGAGAGAAAAGAAAGAAAGGAAGGTAAGTAAATGA chr4 - 94230402 10903375 10903374 10903468 83326935 83326934 83327028 94 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGA ..:..::.........::.x:....:.x:x..:::x..::xx...x......:.:......:.:.xx.::..::x..:..x...:.:....x.. 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% 29734971 NA +3502 chr4 + 190214555 40642798 40642797 40642880 83 CTGCAACCACCGCCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCCAGTAGCTGGGATTACAGATGTGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..xxx:x..:.::........:.x...x..x.x........::.x.........:.:...--.:.........:::. 66M2D15M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 22445672 NA +3745 chr4 + 190214555 40647146 40647145 40647233 88 TATATACACATATATATG-----TATATATGTATATATACGTATATATACATATATATGTGTATATATATAGAGAGAGAGAGAGAGAGAAAGA chr4 - 94230402 33398781 33398780 33398873 60831530 60831529 60831622 93 TATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ....:......::::.::-----....x......x..x.x..:.:::.:::.:....::::......:.:.............x.....x... 18M5I70M 61/88 69.3% 93/94230402 0.0% 5/88 5.7% 7248365 NA +3317 chr4 + 190214555 40647922 40647921 40648000 79 TGCAGCCTTGACCTCCTAGGCTCAGGTGATCGTCCCACCTCAGCCTCCCAAGTAGCTGGAACTACAAG--------TATGTGTCATC chr4 - 94230402 18197127 18197126 18197213 76033190 76033189 76033276 87 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATC .:.....:x:.x..:..:..:...:...x.:xx.xx:x........::..................x.--------.:...:..... 68M8I11M 57/79 72.2% 87/94230402 0.0% 8/79 10.1% 22450795 NA +3104 chr4 + 190214555 40653506 40653505 40653551 46 AGAAAGAAAAAGGAAAAAAGAAAAAAAGAAGGGAGGGAGAAAGGGA chr4 - 94230402 6440208 6440207 6440253 87790150 87790149 87790195 46 AAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA .:.................:....::..:.:.........x:.:.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 34213298 NA +3039 chr4 + 190214555 40672375 40672374 40672417 43 CAAAAAAAAAAAAAAAAAAAGAATAAAGCAGGATAAGGAGACA chr4 - 94230402 20475870 20475869 20475912 73754491 73754490 73754533 43 CAAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACA .......................x:...:.:.:..:.:..... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 20196505 NA +6604 chr4 + 190214555 40672816 40672815 40672987 172 AGCGCCCCAGGATTTGCCTTTTCTTCCC-------CTGTTTCTTGCTGTTAGAATGTTAATCTGGCTAAATCCATTCAGCTTCACTCGTTTGGAAATCAGTCATCTAATGCTTGTAGCGAAAAAAGGAGACAAGCTAATACA-TCTCAACAGAGCAGATACGTGGGAGCCACTCCCACAG chr4 - 94230402 23472093 23472092 23472271 70758132 70758131 70758310 179 AGCTCTTGAGAATTTGATTTAGCTCTCTGGAATGACTGCCACTCACTGCTAGAATGTTAATCTGCCTAAACCCATTCAGCTCCACTTACTTGGAAGTCAATCACCTGGAGCCTGCATTTCAAAGAGAAG-CTGGCTAATGCAGTCACAACAGAAGAGGTGTTCTGGGACAACTCCCACAG ...x.::x..:.....x:..xx..::.:-------...::x..::...:...............x.....:..........:....:::......:...:...:..::x..:..:.x:xx...:..:..-.x:......:..-..x.......:x..:.::x:x..::.x.......... 28M7I94M1D12M1I37M 118/171 69.0% 179/94230402 0.0% 9/171 5.3% 17200723 NA +3239 chr4 + 190214555 40674892 40674891 40674963 72 CTGAAACCTGCACCACCCGGGTTCAAGGGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:x.:..::x.x.x:.:.........x.x...x::x.x........::..................x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 22477766 NA +3449 chr4 + 190214555 40682339 40682338 40682434 96 CTCACAGCAACACGATGACATAAA-GACTATTGTCATCCCCATTTTATAGGTAAGAAAACTGAAACAGAGAGAGAGTAAAGAACTGGCCAAAGGTCT chr4 - 94230402 10729167 10729166 10729263 83501140 83501139 83501236 97 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ......::.x.x.x:...x:..::-:.:..:.:...x.:........:....::.........::..x.x.x..:x...:x..:.x...x.::.... 24M1I72M 63/96 65.6% 97/94230402 0.0% 1/96 1.0% 29953172 NA +3188 chr4 + 190214555 40683585 40683584 40683645 61 GCCTCTGGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197138 18197137 18197197 76033206 76033205 76033265 60 GCTTCTGGG-TTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:......-......:.x...x.xx.x........::.x...........:....x.... 9M1D51M 48/60 80.0% 60/94230402 0.0% 1/60 1.7% 22486447 NA +3311 chr4 + 190214555 40689372 40689371 40689423 52 TCTGGAATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 92735345 92735344 92735396 1495007 1495006 1495058 52 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTT ...x.x....x.....:...:..:.:...............:.x........ 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% -52045973 -42184429 +3387 chr4 + 190214555 40689378 40689377 40689474 97 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTGGTTGCCCAGGCTGGAGTGCAATGGCACGATCT chr4 - 94230402 8681938 8681937 8682024 85548379 85548378 85548465 87 ATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA---AGAGCTTT----TGATTGTCCAGATGTGA---CAATGGTCTGGTTT ........:...::.:.:.:...:.....x:.:...............---:...:...----..:...:....::xx..---......:x:.:.:. 48M3D8M4D17M3D14M 64/87 73.6% 87/94230402 0.0% 10/87 11.5% 32007440 NA +3515 chr4 + 190214555 40689382 40689381 40689446 65 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTGGTTG chr4 - 94230402 5683041 5683040 5683099 88547304 88547303 88547362 59 ATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGA---GGAGTTT---TCTGGTTG .....:.:.:.:...:........:x..................---.......---........ 44M3D7M3D8M 52/59 88.1% 59/94230402 0.0% 6/59 10.2% 35006341 NA +3032 chr4 + 190214555 40699656 40699655 40699771 116 TAAAGACACTAAATTAATAATACCTGGGATGCTCTCATGTACTAGCTCGGCCCTAGAGATAACTATGTTTACTGCCATTTTACAGATGAGAAAACTGAGGCTCGAAGAAGTTAAGT chr4 - 94230402 10729134 10729133 10729247 83501156 83501155 83501269 114 TGAAGATCCTGAATAAACAGGAATTGATTTAGCCTCAC--AATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGT .:....:x..:...x..:.:x.x:..:xx.:x:....:--.x..x.:.x.:xxx:x..:...:..:xx.:.x:x...........:..:............x.:x.x.:....... 38M2D76M 71/114 62.3% 114/94230402 0.0% 2/114 1.8% 29970522 NA +3034 chr4 + 190214555 40706762 40706761 40706831 70 GGCGAGAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAGAAAGAAAG chr4 - 94230402 37322372 37322371 37322438 56907965 56907964 56908031 67 GGTGAAAGA---AAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAG ..:..:...---.:.x:.:x.x:......:............:.:...:...:....x::..:.:..... 9M3D58M 48/67 71.6% 67/94230402 0.0% 3/67 4.5% 3384390 NA +3349 chr4 + 190214555 40706785 40706784 40706847 63 CAAAAAAAAAAAAAAAAAAGA---AAGAAAGAAAAGAAAAAGAAAGAAAGAAAAAAGAGAAAATAA chr4 - 94230402 24662129 24662128 24662194 69568209 69568208 69568274 66 CAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAA .....................---...x:..:...::.:.x::.:..:...x...:...:...... 21M3I42M 49/63 77.8% 66/94230402 0.0% 3/63 4.8% 16044656 NA +3113 chr4 + 190214555 40718119 40718118 40718186 68 GTGCCTGTAGTACCATAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAGAA chr4 - 94230402 54228992 54228991 54229059 40001344 40001343 40001411 68 GTTTCTGTAGTATTGTCAATTAAAAAAACAAACAAACAAAAAAAAACAAAAAGCAAGAAACAACCGAA ..x:........:::.x..x........x...x...x.........x.:...:x..:...x..xx... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -13510873 -80719529 +3129 chr4 + 190214555 40730306 40730305 40730374 69 GGTGACAGAGCGGACTTTGTCTCAAAAAAAAAAAAAAAAAAAAGAAGAAGAGGAGGCAAAAGAAGAAGG chr4 - 94230402 37322372 37322371 37322440 56907963 56907962 56908031 69 GGTGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGG .....x...:x:.x.:...:.xx...:..............:...:::...:..x.x.::..:.:.:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 3407934 NA +3000 chr4 + 190214555 40730328 40730327 40730380 53 CAAAAAAAAAAAAAAAAAAAAGAAGAAGAGGAGGCAAAAGAAGAAGGAAGGGA chr4 - 94230402 37322392 37322391 37322444 56907959 56907958 56908011 53 CAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGA ......:................:::....:..::::.:..:...:.::x... 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 3407936 NA +3043 chr4 + 190214555 40730365 40730364 40730490 126 AAGAAGAAGGAAGGGAAAGAGAAGGGAGAGAAAGAAGAAGTTAAGAAAGAGAAAAGGAGAAACAAGAGGAAGAGAGAAGATGAAAAGAAAGGAAAAAAGTGGTAGTA-GAAGAAAAAGGGGAAGAAT chr4 - 94230402 29503818 29503817 29503944 64726459 64726458 64726585 127 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAAT ..:....:......:........:.:..x..:.:.:...:xx..:.xxxx:x...:.::.:.x..:x....x.x.:.x...:.x...x.:::.::x.xx.::x.x..-..:...x.::.x:...... 107M1I19M 75/126 59.5% 127/94230402 0.0% 1/126 0.8% 11226547 NA +3648 chr4 + 190214555 40739036 40739035 40739110 75 AGCCTTGAACTCCTCAGCTCAAGCAATCCTCCCAGCTCAGCCTCCCAAGTAGCTGGGACTATAGGTGTGCCACTG chr4 - 94230402 18197130 18197129 18197204 76033199 76033198 76033273 75 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG ....:x:.:..:..x:.:.....::x.:.x.xx:.........::...........:....:.x...::...... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 22541906 NA +7115 chr4 + 190214555 40750776 40750775 40750997 222 CCGGTGGGAAAAGCTCAGCTGGTGTGCCCGAAAAAACGGGCTATCCGGACTCCGTTTATGTCATGGCAGCCAACATTTTTCAGGGTATTCGAATCGAAAAGTCGGCACAGAAAGTCTTAATCAAGTATGGGAATGAACCCCTGCGGTCCTTGTCCGAGTCTGAGGATCAGTCCTTTCAGCGTTTGTCTTATGAGCTGGCTTTCAGTGCCCTGAAATGTGAGT chr4 - 94230402 23498283 23498282 23498504 70731899 70731898 70732120 222 CTGCTGAGAAAAGAACAATGACTCTGATTAAGAAGAACGTCTGTCATGACTCTGTATACATAAACGCAGCTAAGATTTTTCAAGGCATTCGTAATAAAAAGCCAAAGGATAGAATGTTAGTGCGGTATGGTGATGAGTCAGTATCTCCCATGCTGACTCTTAAAGATGAGTATTCCCAGCGTTTATCTTACGAACTAGCTTTCAGTGCTCTGAAATGTAAGT .:.x..:......xx..::x:x.x..x:::.:..:.xx.x..:..xx.....:..x..::.x.xx.....:..x........:..:.....x.x::.....:.::x:x.x.:.:.x...:.xx:......x:....::.xx.::xx:..x..::x:xx::.:.:...x...x:.::........:.....:..:..:...........:.........:... 222M 137/222 61.7% 222/94230402 0.0% 0/222 0.0% 17252493 NA +3127 chr4 + 190214555 40752509 40752508 40752569 61 CTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.........x.:xx...x.xx.x........::::.........:......x.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 22555370 NA +3139 chr4 + 190214555 40769242 40769241 40769293 52 CTGCAATCTATTCCACATGGCAGGTAGAGTGATATTTTCAAAATGTAATTGT chr4 - 94230402 51349910 51349909 51349961 42880442 42880441 42880493 52 CTACAATATATTCTACAAGGCAGGTAGAAAAGCATTTTTAAAATGAAATTGT ..:....x.....:...x..........:x:::.....:......x...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -10580668 -83649734 +8812 chr4 + 190214555 40774258 40774257 40774454 197 TCTCTAGTTTTAAGATAAAATTGGCTGCAGCATTGGCAAGATGTCGAATCAAGCATGATGCCCTTTCAATTTACCACATCCTTCCAGAAACAGTTAGGAAACAGGAACTAAGGGCCTCCACTTTACCACTTTATGCTTGGATAAATACTTGTAAAATCAGGTAAGTGTTTAAATCAAATTCTTTATATTTCAAGTCT chr4 - 94230402 23502008 23502007 23502204 70728199 70728198 70728395 197 TTTGTAGGTTTAGGATCAAATTGGCAGCTGCACTAGCAAGATGTCGCATCAAATATGATGCTCTTTCAATTGAATACTTTCTACCAGAAACTATAAGGAAGCATGAACAGAGAGCTTCTGCCTTACCTTTATGTGCTTGGATAAATATATTGAAGACCAGGTAACATCTTAAAAGTGTCACTTAATATTTTAGTTTT .:.x...x....:...x........x..x...:.:...........x.....::.......:.........x.x:..x.:..x........x:.x.....:..x....x:..:..:..::.:.....x:.x.:..............:x.xx..:.:.......xxx:.....xxx:x:x...x......:.:x.:. 197M 140/197 71.1% 197/94230402 0.0% 0/197 0.0% 17272250 NA +3018 chr4 + 190214555 40780762 40780761 40780808 47 CACACACACACACACACACACACACATACACATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x..:..:...:..::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -46591985 -47638417 +3119 chr4 + 190214555 40780770 40780769 40780821 52 CACACACACACACACACATACACATATATATATATATATATATATTTTTTTT chr4 - 94230402 87372747 87372746 87372798 6857605 6857604 6857656 52 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ..x...........x...:......x....::...:..::.....x...:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -46591977 -47638425 +3080 chr4 + 190214555 40780775 40780774 40780828 54 ACACACACACACATACACATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 33661791 33661790 33661844 60568559 60568558 60568612 54 ATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT .:.....:.....:.....x.x........:....xx:.:.x.....:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 7118984 NA +3201 chr4 + 190214555 40780784 40780783 40780837 54 CACATACACATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735350 92735349 92735403 1495000 1494999 1495053 54 CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:..x:.:..:...:..:.:...............:.x.........:.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -51954566 -42275836 +7964 chr4 + 190214555 40790582 40790581 40790748 167 TTTCTGTGTTTTTTCCCCAGATATTGAAATACTTCATGAGAAATTTATTAACATTGAATCAAAGGATCACAGGTTACAGAAAGTTAAAGTGATTTTGCTGCTACCTCGTTGTTCAGGACTGGGTGTTAGTAATCCAGTAGAATTTATTTTAAATGAACATGAAGGTA chr4 - 94230402 23504922 23504921 23505085 70725318 70725317 70725481 164 TTTTTGTTTTATTTC---AGATATTCAGTTGTTACATGAAGACTTCACTGAGATTGAACCAAAAGATCCCAGACTTCAAAATGCAAAAGTTATTTTGTTGGTACCACAATGCTCTGGACTGGGTTTTAGTAATCCTATAGATTTTATTTTGACTGAACATGGAGGTA ...:...x..x....---.......x.:x.::.x.....::.x..:.:.:.x......:....:....x...::.x..:..x.:x.....x......:..x....x.:x..:..x.........x..........x:....x........:.x........:..... 15M3D149M 123/164 75.0% 164/94230402 0.0% 3/164 1.8% 17285660 NA +4902 chr4 + 190214555 40798770 40798769 40798946 177 ATCTTCT----TCTAATATAGTTACTAAAGCTCAAGCAGTTGTTTACTGCACATGTTCAGTTTTTCCAGAAGAAAATGAAGCTGTTGTTAAGAAAGCACTGGAATTTCAAGACCTTGGGAATAAAGGACAACCTTACAGGTAAGAAAAGGAAGGATTCTTCTA--AACAACTCAAACAAATAT chr4 - 94230402 23506425 23506424 23506607 70723796 70723795 70723978 183 ATCTTCCACAATTTTATTTTGTAGTTCAGGTACAATCTATTGTTTACTGCACTTCTTCAGTTTACCCAGAAGAGAATGAAGAAGTAGTGCAAAAAGCACTGGAATGTGGTGTGAAAGGAAAAAAACTGAAACCATTCAGGTATGGTATGACTGGTTTTGTCTATGGAAAACTTGAACAAGCAT ......:----.:.x..x.x..x::.x.:.:x...x.x:.............x.x........x:........:.......xx..x..xx.:.............x.x:x.xxxxx..:..x...xx:x....x.x......x.:x.x.:xx..x..:x....--:.x....::.....::.. 7M4I152M2I18M 118/177 66.7% 183/94230402 0.0% 6/177 3.4% 17292345 NA +5804 chr4 + 190214555 40807041 40807040 40807204 164 CTTGTTCCTGTCTGCTGCAGGCTTAGTCCTCCTGTTCTTCCACTGTGCTCCTTAAAGGAAATTCAA--TTGTCTACTGATAAATTTTTCAGAATGGAACCATCTGAAATTACCAATGGTTGTTTTCTTTCTATTTTAACAAGGGAGGTAAGGAAAAAAAATCCTAA chr4 - 94230402 23507444 23507443 23507599 70722804 70722803 70722959 156 CTTCCTTCTTTTTG--GCAGACCGATTCCTCCTGTCTTTGCGGCATGCCCC--------AATCCAGAGTCCTGCACTGATGCTTTTTTCAAAATAGAACCATCAGAAATTTCCAGCGGCTGTTTTCTGGCTGTTATAGCAAGAGAGGTAAGAAAACTAAACTTTAA ...x:.:..x.:..--....:.:x.x.........::..x.:x::...:..--------...:..:--.:x.x:......:xx.......:...:........x......x...::..:........xx..:..x..:....:........:...xx...:::... 14M2D35M8D7M2I98M 109/154 70.8% 156/94230402 0.0% 12/154 7.8% 17299597 NA +19102 chr4 + 190214555 40812292 40812291 40813538 1247 TGAGCCGAACGTTTTATGCAGCTAAATTTATTCTCACAACAAATTACATTTAAATGTGTAAAAGTGGTCAACAGGAAAAGGGCATAAAGGAAAACAAAGCGTTC-TTTCAGGGGAAGTAAGCTGCTCTG---GAGGCCAGGAACTACTGCTTGCGTTGACACGGTGTGAGTGGGTATCTTTGCCCTGAAGCTGAAGTTAAACT--TTCTACTGGCCGTGTGGCAC-ACACGTTAG----ATGTGTATTAGGTTAAGCCTGGCCAACTAGAGAGCGAAGGGGCTTATTAGTTAAATTGTGCTAATATCAGTTAGGAAAATGCTTGTCATGTTGTGGTGAAATCTTGAGGAGTTTGTGTTGCAATGCCTGGGACATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCC---AGGCAATGGCCTTGTGTCGAGTCATCTTACAAGTGTCCATCTTGAAATCATAAAGTGGATTTAAA------AAGAAGTAGCA-----GTGCCACAGTTTATCA-----CCAAGAACTTATTTTAATGGAAATGGGTCTAATGTCCCTTCATGCAACAAGACAGATGAACAAAAAACAATGGTCCTAATTAGCTATGAGTGATCTTGTATCCAGGTGGAAACAAAGGGCATGTGTACATGTATATATCTCTTAGA---------------TGAAATCACACATGTTGTGAAGGGTAGAAAAACGAAGCACCAAGCAGTGCTTTAGTCTGCAAAGGAAA-GTTTTTAGCCATAGGCATGTTGGCTAG------TCGTTCCCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTG---------TCTATCTAGCTGCTT---TTAAAAAATAAAAGGAACTTTAAGCATTTTGCCTT------TTCTTCTACATATCCCAATAGAAATGTGACTACAAATCATTACAAAACCAC--TTTTTAGGCAATGTATAGTTCACTGAGATTACTTAGATCTGGATACACTGGGAGATAATATCCAGGAAAGATAATACATTAACACAATAATGCAGTATATTTCAGTAAAAATAGAATAAATAAAATAAAAATATTTTAAGCTGTATTTAACAGGTTAATTAAAAATATGGTA--AGACATAGAAGGCATCGTGAA--CATGGCTGCCTGTTTACCGAATCACAGA----TCTAAAGAATGCATAGATAACTGAAGTGTCACTAAGATATCAGGTAAAACATTGGCATCCTTTTACAAACAAATACACACATACTTTCATACATACTTTTTGGCCATGG-CAGAAAGTGTCTGAACATACTCTTTAACA chr4 - 94230402 23510939 23510938 23512103 70718300 70718299 70719464 1165 TGAGACGATCATTTTATGCAGCCAAATTTATTCTCAGAACAGATTACATTTAAATGTGTAGAAGTGGACAACAGCAGGGG---------------AAATTGCCCTTTTCAGCATCAATTGGGTGCTCTACGCAAGGCTGAGCTCTGCTAATAAC-------CAGTGGGTGTGGGTCC-----------ACATAAATCCAACCTACTTTTGCTGACTGTGCAGCACAACATTTTAGCCACATGTGAATTAA-------CTTGCCCACAGACGGAATAATGGCATTAAAGGCTGAA-----CCTACATAAGC----------------------TGCTGAAATAAAAAAGCA-CTGTTTTGCA-----TGG---------GTGCTTTACTAACAG----------TTGTACATCCCTAATAAAATAATCATCTAT-GAAATACTTGataa------aattaaaaaaaaaaaaaGGGATGTAGAACTCTTAGGAAATGACACAGACCTGGCATAAGCTGTCAGACACTCCCCAGCCTCTCCTGTCACAAAAGGGCATGTTGCCTCAGCAGGC----AGAGGTATCTCCACGTTATTTCCATTTGAAGTCCCCATAGTTGTCTCTGTAGCC-----------------------------TTGTACCTCCCACACCCCTCCTCTCCCCTTCAAGTGAAACAAGCAGTGACTTAAAGAAAACCTA-----CAGCCAGCACTGCGGATTTCAAAAGAAAGGCTTTTATCTCT---CATTTTTGATGGTGAACATAGATCTCCTTGCTTCTGCAAGGGAGCACATTAATGACGTGAGTGATACGTGATACTTACCTCTAGTTTACTACTTGCATTGAAAAAAATAAGAAATT---AGC--TTCGCTTTACATGATTTTTCTACAGACTTCAATAAAAATGTGACTACAAATAATTACAAAGTTGCCTTTTTTAGGCAAACTATAGTATACAG------CGTAGAGAATGTTACA-----AGATCACGTCCAGTAAAGACAATACATTGACATAATAATGCAGGATATTTCAGtaaaaatagaataaataaaataaaaatattttaaGCTGTATTTAACAGGTTAATTTAAAATATGGCATCAGACATACAAGGCATAGTGAATGCATGGCTGCCCGCTTACAGAGTCGCTGGGTATTGTATAAAATGCATAGATAACCGAAGGGTTGCTATAACATCAACTCAAACAGCGGTAGTTACTCGGACACGCGTAGGC-CATA----CATACATA--TTTTGGCCGTGGTTAAAGAGTGCCTCGGTACGTTGTTTGATA ....x...x.:...........:.............x....:..................:......x......x.:::.---------------...x:.::.-......x:xx.:.x:.x......:---:....:::.xx..:..:x.x:.-------.:...x.x......x:-----------.xx.:..x::..x..--..:.:...:.:...::....-...:x....----.....x....:-------..x...x..x::x.::xx..x..xx...xx:.:.:..-----.:x.:..x..:----------------------..x......xxx:.:.x:-:...x.....-----...---------.x..:x...x.....----------.x.x:.x...---.x:x...:::.x.x.:.-..:x:.::.x.:..------.x:.x:...xx.x...:x....x..:.------.:...:.::..-----x..x..:.:x:.:...-----:.xxx.:.:.x.::.:x::x...x...:x.:x..:.:.xx..x..----...x:x..xxx..x:xx.:xx:x:.::x..x.xx.:..::x..x:::....x..-----------------------------x.:..:...::.x.---------------.x..:.x.x...x.:x....xxx:x......x.x.-----..:x...::..x::.x:.x....:....-.:.....x.:x.---...x..x.x.:.------.x.x..:.....x.x:...x.:......x..xx....x...:xx::.x:...---------....x:.x:..:...---..:.....x.x...:..:.---...--..:..:..------..:.......x.:::.....:................x........::::.--...........xx......x:..x.------.x....xxxx.x....-----....x.::.....x.....:........:...:..........x................................................................x.........:.--.......x.......x.....--..........:.:....x..:..:.x.:----.x..x.:..............:....x..::...x:.:....:x.x.....x:..:.x::x:.::x.x..:x:..x:.-....----........--........:...-:.:.:....:..x:::.:::.x...:.:. 80M15D9M1I24M3I22M7D16M11D15M2I20M1I9M4I11M7D37M5D11M22D18M1D10M5D3M9D15M10D10M3I17M1D14M6D27M6I11M5I16M5I45M4D54M29D14M15I35M5D28M1I12M3D12M6I52M9I15M3I19M3D3M2D8M6I51M2I25M6D16M5D120M2I21M2I28M4I78M1D4M4D8M2D12M1I29M 736/1084 67.9% 1165/94230402 0.0% 244/1084 22.5% 17301353 NA +36406 chr4 + 190214555 40815540 40815539 40816275 736 ACTGATGCCAACAGCCAATTTTGTCAACCAACAGGTTCAATTTTATGAAAAATTAAAACACAAACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTA---ACTCACGCATCATTCATTCCAAGGACGC-AGCGTTAGTTCACTAGGAGGGGTGGGGCCACACTCTTCTCTGTGTGTGTGTGAAGTTAAGTAATGTTCACAATATTTACAATAAGAAAAAGACCTTCCACTGCGCATGATGTAACTTACAGC---AAAAAAAATTATTCATGCTTCTTTTCATATCACATGATGGTGGCAAGA-CGAGAGAACATGCTTGTCTAACACTGCTTGGTTAAGGGTAAATTCTCTGAAGACAAAGCATCAGCAACTGGA--TGGAAGGTCGGATGGCGG-AGTTCATTTTCTTTAGTGTAGCTAGT-CAATCTTCAGGTAAAT---AGCCGAGTCCTTTTGCATGTGCAGCTATGGCATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGATAAGACCCCTCGTTTTACATTGGTTGTGACTCTTCTGGTTACTGAATCTGCTGGCGGTGGAGGTGGTCGAACTTTCTGAGAAGGCGGCCTGGCTACCAAGCACTTCTGATATCGTAACTGAAATAAAACAAAA chr4 - 94230402 23513922 23513921 23514642 70715761 70715760 70716481 721 ACCAACGCTGACAAACAATTTAA--AATTAACAGGTT-AGTTCTGTAAAAAAT-------AAAACTTGGTATTTAATCT--GCAGTAATTCAACGGTAGCTGATCCTTGGTATCTACTCCAGTGTTGAGAAC----CAAAGTGCTGTAGGAATTAAGATTGGTTTGTGACAAATCCAGCTCA--AGACAGTGAAACCATCAACTCAGGCGTCATTCACTCCAAGGACTTTAGCATGAGTTCACTGGGAAGGATGTGGCCATATTCTTTCTT-----TGTGTGAGTTCAGGTAATGTTCACG-TATTTACAATCA--AAAAGACCTTCCATTGCTCATGATGTAACTCACTGACAGGAAAAAAATTATTCATGCTTCTTTTCATATCAAACAATGATGGCAAGAACGAGATAACATGCTTGTCTAGCATTGCTTTGATACGGATAAATTCTCTTAGGACAAAGCAGCAGCAATTTGGATTGGAAGGCCAAACATCACCAGTTCATTTTCCTTAGTGTAGCTACTGTTATCTGCAGTTAAATGTTAGGAGAATCTTCTTATA----CAGCTACGGCATGTCGGTGACTGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGACAGCACTCCTCTCTTTACGTTGGTTGTGACTCTCCTGGTCACCGAATCTGCAGGTGGTGGGGGAGGCCGAACTTTCTGTGAAGGAGGCCTGGCCACTAAGCACTTCTGATACCGTAACTGCAAGAAAGCAGAA ..::.:..::...:x......x:--..::........-.:..:.:.:......-------x.....:.x:..::x..:.--:...:.......:....x...x.x:x::..::........:......:...----...............x....::x.x.:........::......:x.--............:.---.....x..:.......:.........x:-...:.x........:...:..:..x.....:.:....:::.-----.......:x.:.:...........:-..........x.--.............:...x............:..x.x---:...............................x.::...:........-.....x..............:..:.....x.x..x..:..........x.:.........x......:.x.:--.......:.::.::x.:x-...........:............x.-:x....x...x.....---..xx..:..:.:..::.----......:.....x........x................................:.:x..:....x:.....:..............:.....:..:........x..:.....:..x..:...........x.....x........:..:..............:........x..x...:..:.. 23M2D12M1D15M7D19M2D51M4D46M2D14M3I28M1I41M5D25M1D12M2D36M3I48M1I72M2I18M1I26M1I16M3I17M4D187M 565/706 80.0% 721/94230402 0.0% 45/706 6.4% 17301618 NA +12904 chr4 + 190214555 40821865 40821864 40822053 189 ACTCACCATGCAGGCGGCCTGCACCGCCTCAGACACGTTACCAGCATTAGGCTCGCACCAGAAAACGTGGCACTCAAAGCGCTGGTTCCCCGTGTCCATGATGAAGGCAAATGTGTGGACGTCCTTCCCAACACCCATGAAGGACAGGAATCGCACACGACATTCCACTAAGACTTCCTCTTCATTCTG chr4 - 94230402 23515223 23515222 23515411 70714992 70714991 70715180 189 ACTTACCATACACGCAGCCTGAACAGCTTCTGACACATTGCCTGCATTTGGTTCACACCAAAACACGTGGCACTCAAAATGCTGGTTTCCTGTATCCATAATGAAGGCAAATGTATGAACATCCTTGCCTACTCCCATGAAGGACAGAAACCGCACACGACATTCCACCATGATTTCCTCTTCATTCTG ...:.....:..x..:.....x..x..:..x.....:..:..x.....x..:..:.....:..x..............::.......:..:..:.....:..............:..:..:.....x..x..x..............:..:.................:.x..:............... 189M 156/189 82.5% 189/94230402 0.0% 0/189 0.0% 17306642 NA +7819 chr4 + 190214555 40823634 40823633 40823771 138 TCCTTCTCACCTTTTCACTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCCAGTCCTCCTTGTTGGATGAGGTCATAAGATTTTCTATGGCACTGTTCAAAATATCCATTCCTGGGGACAGAA chr4 - 94230402 23516210 23516209 23516346 70714057 70714056 70714193 137 TCTGCCTTACTCTTTCACTGATGACTGTGACAGTAGCGTCAGCAACATTCATGGTAACTGGCATCCAGTCCTCCTTGCTAGAGGAAGCCATCAGACTTTCAATAGCGCTGTTCAGAGTATCCATTCCT-AAAACAGAA ..:x:..:..::.............x..x.....:..:.....x..:......x.x....:..x.............:.:..x..:.:...x...:....x..:..:.......:.:...........-:::...... 128M1D9M 106/137 77.4% 137/94230402 0.0% 1/137 0.7% 17307424 NA +7164 chr4 + 190214555 40825870 40825869 40825984 115 ATAAACATTT--CACATACCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGGAACTTCTGGACCAGCTCAGTCTTTGGTGTTGGAAAATCTACTACA-GGGAACAAA chr4 - 94230402 23516791 23516790 23516908 70713495 70713494 70713612 118 ACAAATATGTAACACATACCCACAGGTTTAGCTACAGGTAGCATTCCCAGGTACTGGACGTGAAACTTCTGCACCAGTTCTGTCTTTGGTGTTGGGAAATCTACTGCATGGGAACAAA .:...:..x.--........x..x.....:x.........:...x....:......x.....:........x.....:..x..............:.........:..-......... 10M2I96M1I9M 98/115 85.2% 118/94230402 0.0% 3/115 2.6% 17309079 NA +6181 chr4 + 190214555 40827129 40827128 40827223 95 TACCTTGCAAAGGGACATCGAGGTTCACATTGGCCCTTTCCTGTAAGGAGCTGCAGGCCAGCGCTTTGGCATTCTTCCGTTCAGCCATAATCTAA chr4 - 94230402 23517958 23517957 23518052 70712351 70712350 70712445 95 TACCTTGCAGAGGAACATCAAGGGTGACGTTTGTCCTCTCCTGCATTGAACTGCAAGCCATAGCTTTAGCATTCTTCCGTTCAGCCATAATCTGA .........:...:.....:...x.x..:..x.:...:.....:.xx..:.....:....xx.....:.........................:. 95M 77/95 81.1% 95/94230402 0.0% 0/95 0.0% 17309171 NA +11043 chr4 + 190214555 40830458 40830457 40830638 181 CTTACCTTGGAGCAGATCTCGTGGAGACTTGTGGCAATGGCTTTTGCTGGTGTGTCACATCGAAATACATGACATTTCAAAATTCTTGTATCTTTATCTCTTGCTACATAAGCAAAATCCCTGTGCAAGCAAAATGTATCAGTCCATTAGTAAGAGAAGCTGATTACCAACACATACTTTA chr4 - 94230402 23520090 23520089 23520259 70710144 70710143 70710313 170 CTTACCTTTGAGCAGATTTCGTGTAAACTTGTGGCGATGGCTTTTGCTGGCGTGTCACATCGAAACACATGACATTTCAGAATTCTGGTGTCTTTGTCTCTTGCCACATACGCAAAGTCTCTGCACAAACAACATGAATCAACACATTAGAAGCAG-----------TAACACATACTTCA ........x........:.....x.:.........:..............:..............:.............:......x..:.....:........:.....x.....:..:...::...:...x...x....::x......x.:x..-----------:...........:. 156M11D14M 142/170 83.5% 170/94230402 0.0% 11/170 6.5% 17310368 NA +3316 chr4 + 190214555 40831968 40831967 40832042 75 ATGAAAGTGTTTTTACACACACACATATTTATATATTTATTTATATACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x:x..:.x.x.:..:.x...::......:....x...x:x..:.:xx.:.................x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 32436180 NA +3136 chr4 + 190214555 40831974 40831973 40832065 92 GTGTTTTTACACACACACATATTTATATATTTATTTATATACACACACACACACACACACACACACACACACACACACATATACACCAAGCT chr4 - 94230402 8395792 8395791 8395883 85834520 85834519 85834611 92 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACT ....x.x.:::..:.x....:.x.x..:..x.:.x.::x....:xx.:.................x.....x.::x.:.x.x.xx....:.. 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 32436182 NA +3085 chr4 + 190214555 40831991 40831990 40832064 74 CATATTTATATATTTATTTATATACACACACACACACACACACACACACACACACACACACATATACACCAAGC chr4 - 94230402 8395803 8395802 8395876 85834527 85834526 85834600 74 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAAC ....xx:..:......:x...:..::.x:...:xx.:.................x.....x..:x.:.xx..:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 32436188 NA +8360 chr4 + 190214555 40842329 40842328 40842691 363 AGACACCACGAAGGGGGGAGAAGTGAAAATCGGCCGGTTACCTCTCTCTGAATCCGGGAAGGCGTGAGGGAACAGAGCAGAAACAACACGTTAG----CATTCACACGGCATCCCGCCAATAACACAGCCCCGTTAACAG-CGAGTCTGAG------------------CACTGACAGCTCATCTAATTT-----------------CCCAACTCTGCAGCAATTAATAGGCTTTCCGTGCTTATTTTAGGTCAACTGTATCACCCAGAAGTGTGTATTTTGAGCCACATTATGATGAAGCCAAGAGATGCCAGCTGAATTTACAGAGGCA------ACATATCAACTGGGGGAGGTAATCAAGCTTAAAATATCACAGTCAAATACAGGAAACTGTTTGCAGTAAACA chr4 - 94230402 23527832 23527831 23528214 70702189 70702188 70702571 383 AAACACAAAGAATAACGGGAAAATGAAAATCAT----TTACCTCTCTCTGAATCCACGAAAGCATGAAGAAAGAGA-----AAGAGCAGGTTAGAAAGCACTCACAC-------------TGACAGAGTTCCAGCAAAAGATGAGACAGAGTAGCTGAAGTGTGCCATACATTTAAAATTCATT--ATTTGTTTGTAGCACAGTGTGTCTAAGCGTCCTGCTACTATT-TGCCTTCAGTGCTTATTTTAGTCAAATCCTGTTGCTCTCAAGCTTGTATTTTTGGCAACAT-GCAATGAAGCCAACGAGCATCAGCTGAGTTTAGCGAGGCAGGACAGACATATCAGCACTGGGAGGTAATCGAGCTTAAAATATCACACACAGATAAGGGAAGTAGTAAGGGCTAAGCA .:....x.x...x::x..::..:........:x----..................:x...:..:...:.:..x...-----..x.:..x.....----..:......-------------.:...x..::..:x:..x..-:...x.x...------------------..:.x.x.::....:--....-----------------:.:..x:x.x.x..x.:..x.-x..:...x.............x:x..::x.:.::.:.xx...:x........x:..x....-:::..........x::::::.......:....xx......------........:.xxx...........:................xx..:...x:....::x..xx.x:x...:.. 33M4D39M5D13M4I9M13D20M1I10M18I15M2D4M17I21M1D61M1D40M6I72M 235/337 69.7% 383/94230402 0.0% 72/337 21.4% 17314497 NA +3185 chr4 + 190214555 40854790 40854789 40854849 60 CAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAAAGAAATTCATTTCCTAGGGGGGCTGTCC chr4 - 94230402 46881593 46881592 46881652 47348751 47348750 47348810 60 CAAAACAGAAAAAAAAAAAAGAAGGGGGAAGAAGAAGATCTGTACCTTGTGGGGCTCTCC .....x.:................:::...:.....:x..xx.x...x.x......x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -6026803 -88203599 +3410 chr4 + 190214555 40870695 40870694 40870745 51 TATTATATACATATATGTGTGTGTGTGTGTATACACACTCTTTTTTTTTTT chr4 - 94230402 27034823 27034822 27034873 67195530 67195529 67195580 51 TATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCT .........:....:..................:..x:.::....::..:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 13835872 NA +3220 chr4 + 190214555 40870700 40870699 40870747 48 TATACATATATGTGTGTGTGTGTGTATACACACTCTTTTTTTTTTTTT chr4 - 94230402 27034826 27034825 27034873 67195530 67195529 67195577 48 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCT ....:....................:..:.:..::..:....::..:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 13835874 NA +11718 chr4 + 190214555 40881067 40881066 40881424 358 CATGATTAAT-GGAAGGCAGAGAAGCCACTTTTAAAGAGATAAAATAGAACCACAGTGTAAGTCAGCAAAACGGTCAAGTAAATCGTGATGCCTCTGCTTATCATGGAGCTGCATTAAAGAGAAA-----TTAACTCCAGAGGTCAAGACAATACTATAGTGTAGGGAGAGAATTATTGT-TCCTTCCTGAAGACTTTTCTCCCTGAGGCAAGACAGC--ACATACCAT-AGATTAAACTTTCATCAGCAGATCTTGGAATTCCATCAGTCTTTCATTACTGACTGGCTCAGAGAATCCCCTACT-AGATGTCATCAGGAAA-CTCTACTTCTTCCAGACTGAGACCCCACCTAA--TCACTCCTAGGGAAA chr4 - 94230402 23547845 23547844 23548206 70682197 70682196 70682558 362 CATGATAAATTGGAAACAAGGGATGCTACCTTTCAAAACACAAAACCACTACATAGCTTAGGTCAACAAAACAAT----------GTGGAGCTTTTGCTTATCATACAACTGCTGTAAAAAAGAAAAGAAGTAACTCTAGAGGTCAAGATAATAGTGTGGCGTACGGAGAAAATTATTACAGCCTTCCAGTAGATGTTTCTGCCTGAGGTGAGTTACCCAACATATCCTCAGATTAAACTTTCATCAGCAGATCGCTTTATTTCATCAATCTTTCATCATGGCATTGCTTAGAAAATCATCTGGTCAGGTGTCATTAGAAAACCTTTTCATCTTCTGAAGTAAAATCTATCCCTATTTCACTACAAGTAAAA ......x...-....:xx..:..x..:..:...x..:.x.:....:x:xxx..:..:x..:....:......::.----------...:x..:.:..........:x.:....xx....:.::..-----x......:...........:....x.:.:.:...x.....:.......::-x......x.x...:x.....x.......::..x:.x.--.....:.x.-........................x:xxx...:.....:........:.:x.xx.x...:...:....x:..:x.-..:......:..:...-..:.x.x.....:::.x.:.:.:.:xx..:x.--.....x.x..x:... 10M1I64M10D40M5I50M1I37M2I9M1I75M1I16M1I32M2I15M 246/348 70.7% 362/94230402 0.0% 24/348 6.9% 17333222 NA +9190 chr4 + 190214555 40890357 40890356 40890513 157 GACTCACCGGCCATTGTCGCGGCCCACGCCCCACACGCGGATGCTGACGATGGGCTGCGAGTGCAGCACGCTGCGGTCCATGGGGTCCACCAGGCTGAGCATGTCATTCTCCAGGATCAGGTACATGTCTTTCCCCTGGGACACAACGAGAAAACAC chr4 - 94230402 23550426 23550425 23550582 70679821 70679820 70679977 157 GACTCACCGGCCATTGTCACGACCCACTCCCCAGACTCTGATGCTCACTATGGGCTGTGAATGAAGAACTGTACGATCCATGGGGTCGATCAGGTTCAGCATGTCATTTTCCAGTATCAGGTACATGTCTTTGCCCTGCAACTCCAGAAAAATGTAC ..................:..:.....x.....x..x.x......x..x........:..:..x..x..xx.:..:...........x.:....:.x...........:.....x.................x.....x:..x.x.x:.:..x::.. 157M 124/157 79.0% 157/94230402 0.0% 0/157 0.0% 17339931 NA +3479 chr4 + 190214555 40892039 40892038 40892097 59 CTCCCAGGTTCAAGTGATTCTCCTACCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::..........x...x.xx:x........:..:.........:......x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 22694900 NA +11625 chr4 + 190214555 40893260 40893259 40893429 170 CTTACCTCTCCCCAAATCCCGACTGTGTCTCGGATGTCATTTTTGCAGTAGGAAAGTTGCCTGATGCAGTTGTTGACCGCAACACTACTTTTACCGGGGGCGAGGTCCTCTTCTGCCATCTCTACCCATCCCAGAGAACGCACAGCAAAACACTGGAAGACAGTGAAAGA chr4 - 94230402 23553991 23553990 23554160 70676243 70676242 70676412 170 CTTACCTCTCCCCAAATGCCAACGGTGTCTCTGATGTCATTTTTACAGTAGGAGAGTTGTCTGATGCAATTGTTCACAGCAACACTACTTTTTCCAGGAGCAAGATCTTCTTCTGCCATTTCTACCCAGCCCAGAGAGCGCACAGCAAAGCACTAAGAAAGAAACAAAAA .................x..:..x.......x............:........:.....:........:.....x..x..............x..:..:..:..:..:...........:........x........:...........:....:::.:.x.:xx...:. 170M 141/170 82.9% 170/94230402 0.0% 0/170 0.0% 17339269 NA +3014 chr4 + 190214555 40901489 40901488 40901530 42 AGCTGACTTCAGGGTTTTTTTTGTTGTTGTTTTTTGTTTTTG chr4 - 94230402 37343216 37343215 37343257 56887146 56887145 56887187 42 AGTTGACTTTGTGGTTTTTTTTGTTGCTGTTGTTTGTTTTTG ..:......::x..............:....x.......... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 3558273 NA +3123 chr4 + 190214555 40906461 40906460 40906528 68 TCTCAAAAAAAAAAAAAAAAA---AAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAACAAAAATTCCCAC chr4 - 94230402 45107759 45107758 45107829 49122574 49122573 49122644 71 TTCCAATATAATAAAAACAAATTTAAAGAAAAAGGGAAAAAAAAAAGAGAGAAGAAAGCAAACATTTCCAC .::...x.x..x.....x...---...:...:.::::....:......:.:......:....x...:.... 21M3I47M 50/68 73.5% 71/94230402 0.0% 3/68 4.4% -4201298 -90029104 +3374 chr4 + 190214555 40907312 40907311 40907406 95 ACTGATATGCTTTATTTA---ATTTAATTTAATATATTACATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTAGACAG chr4 - 94230402 70265097 70265096 70265191 23965212 23965211 23965306 95 ACTGCTATATTTTATTTATTCCTTTTACTTACTTCAGTGGACTT---TAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG ....x...::........---x...x.:...x.x:.x.:x.:x.---..x......x...........:..x.:............::.:.x.x.... 18M3I23M3D51M 68/92 73.9% 95/94230402 0.0% 6/92 6.5% -29357785 -64872617 +3124 chr4 + 190214555 40907346 40907345 40907396 51 TACATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681933 8681932 8681983 85548420 85548419 85548470 51 TAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..x..........:...::.:.:.:...:.....x:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 32225413 NA +3096 chr4 + 190214555 40918077 40918076 40918148 72 CACTTTAGCACATAAAACAGAACACAATATTATGAATATTTTCACTTATTTACAATGTGACGTATCCCAGTG chr4 - 94230402 6504409 6504408 6504480 87725923 87725922 87725994 72 CATTCTGGTACATGCAGCAAAACCCAAATTTGTCAGCTTTGACACTCGTTTGCAATGTGACTTATCTCAGTG ..:.:.:.:....:x.:..:...x...xx..:.x.::x..xx....::...:.........x....:..... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 34413668 NA +3112 chr4 + 190214555 40918706 40918705 40918770 65 CTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCTTCCTTATTTTTTCTCTGTTTTTTTTTTT chr4 - 94230402 2453080 2453079 2453144 91777259 91777258 91777323 65 CTTTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTT ...:::.x:..::......:.::...:...x......:.:.xx........:.:..x....x... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 38465626 NA +3020 chr4 + 190214555 40918754 40918753 40918793 40 TCTCTGTTTTTTTTTTTGTTTGTTTGTTTTTGTTTTTTTT chr4 - 94230402 20788980 20788979 20789019 73441384 73441383 73441423 40 TTCCTGTTTTTTTTTTTGTTTGTTTGTTTTGCTTTTTTTT .::...........................xx........ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 20129774 NA +3048 chr4 + 190214555 40918764 40918763 40918796 33 TTTTTTTGTTTGTTTGTTTTTGTTTTTTTTAAC chr4 - 94230402 48899526 48899525 48899558 45330845 45330844 45330877 33 TTTTTTTGTTTGTTTGTTTTTGTTTTTTTTAAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% -7980762 -86249640 +37161 chr4 + 190214555 40934445 40934444 40935449 1005 TCTTTACAAACCTTGGCTTCTGGGTCACTGTTGATACTACAAGAATCATCATCATCAGGGTGTGGGGCATTTCT----AGGCAGAAAAACAGAAAAGTGGACTTAGAATTCTATTGCAAACTATCTGCACAAAGCCATACATTGACAGCAGGTCGATCC----TACTAATGTCCT---ACCTGAGTTTCAAAGATGCATAGCGTAGGGTTGCTCCTTCAAACTCTTTTAAACTGGGGTCCGGGTTAACAGTGGCTGCATGCAAATCCTAGAGGAAAATAGAACCTTGTTAATGTACAATGGGGGAGAAGACCATTCATTGCCTCAAATATCAAAGGGGAGAAACGTCTTCCCAGCAAGAGGCAGAGAGTGTACGTGAGCTTAGGCAGAGAAAGGCATGCAAGGACTGTTGAATGCTGACT-------GGTGCAAACTCCTG--TTCTTACAAAACAACGGG--------------GAACCTAGGGCATTCACAATGGGAGACACCAAAAAAAGGCAACAGGAGTGTGAGCTGAATGCCCCTAGCAAGAAGCCCGATCACTGTGTCCCTGCAGAATGCATGATATTCAC---------AAAGAAGAAAAATATACAGCCACAGCCATGCAGAAA----GGATAA-AATATTAAATGATCTAAGATCTGACAATATACTTGCCTTCCAAATGTCACTATTAATCTTTCCCCCATTCAGAACAGCAAAATCACTCCATGGCTGTTTCTAGACATATAATTATTCACATAGGAAAAAAGCACATTGATTTAAAGAAAAAGAAAAGAAAAGAAAAAAAAAAAACACAAGACACTGTTGTTAGCATTGATATTCACAAGATGGGTTAGGGAACAAGTTAACTCTAACAGCAACTTGTTGGCTCACTCCCTCTATGTCTAGATTAT--CACCTGAAGACGAGGGCAGGAGAGTGATGGTGCT-TTAATTACTTACC-AAATAAATGACTAAA-----------CATTAT----TAGAAGCAGACAGTGAAGTTATTTCCTTAAGGTAATTTTAAAAGCAAACAATATAATTCCAAGTAT chr4 - 94230402 23567995 23567994 23569031 70661372 70661371 70662408 1037 TCCTTACAGACCTTGGCTTCTGGATCACTGTTGATGCTACAGGAATCATCATCATCAGATTGTGGAGCATTTCTGTTAAAGAAAAAAGAAACAAAAATCAACTTAAAA--ATAAGGCAAAAATTAAGGAAAGCACCATA---TGA-AACTGGTTACTCCATGGCACTGAAGTCATTGTACCTGAGCTTCAAGGAGGCATAGCGCAATGTTGCTCCTTCAAACTCTTTCAGACTCGGGTCTGGGTTCACAGTGGCTGCATGCAGGTCCTAGAGATAAAGGTAGTTTGGTCAATGCAGTATTAAGGACACCACCAT--GTTATTTCTTATTTCAAAGGGAAATTAAATCCTCCCTGCAAAGAAGCGACAGTACTTCTGGCTGAAGTTGAAAAGAGGCATGCATATATATTCTCAAGCTGCATTTCATTCAGTGCAGGCATCTTATTTGTTATATCATGGCAGTTGCCCTGCAAGTTTAGACTCAATCCATTC-CAAGTGGAAAGATCAGAAAA-GGCAGCATGTTTGTGAGCTACACATCCCTAGCAGTACCCCCATTCACTTCGGCC-TAAGTTATGAATGACATTCATGGAAAAATAAAAGGGGAAAAA---ACAGCCACTGCCATGCAAAAAACAAGGGTAATAGTATTAAAGGTTCTAAAATCTGACAATATACTTGCCTTCCAAATGTCACTATTAATCTTTCCCCCATTCAGTACAGCAAAATCACTCCATGGCTGTTTCTAGACACATAATTATTCACACAGG-AAGAAGCACATTGAT---aaaaaaaaaagaaaaaaaaaagaaaaaaaaaCACAAGACACTGTTGTTAGCATTGATATTTACAGGATGGGTTAGGGAACAGATCACCTCAAACTTCAGCTAAGTA-----------------CTATACCATGGCATTTGGAGGAAAGGGAAGAGAGGACATGCTGCTAACAGTTACTTACCAAAACAAATGATTGAAACAAGGAAAGTTAATATAAAATAGGAACGGACAATGAAATTATTCTTTAACTATGATCTTAAAAGCAAGCAAAATAAATCTGAATAT ..:.....:..............:...........:.....:................:x.....:........----.:.x.:...:.x.x....:.x:.....:..--x..xx.....xxx.xx.x.x.:x:.....---...-.:.x...::x...----:...:.x...x.---.......:.....:..x........:.:x....................:.:...x.....:.....x................::........:x...x:x.:::.x..:....:.xx..x::...x.xx.....--:..:::..xx..x........:.:xx.x:..:....x....::::xx..x...::x:x..:x:xx..x:::.:.:.........x:x.:xx.:xx.x....xx.-------:.....::.x:..x--..x...:.xx.:::.:.x--------------::..::.:xx.....-...xx...:.x.:..:....-....:..x.xx........:x.:::........:x.xx...:x.....x:.x..-.:x:xx...x....:.....:---------....::......---........x........:...----..:...-.:.......x.x.....:......................................................x.................................:.............:...-..:............---..:.....:.:..:....:..:......................................:...:................::.:.x...x...xx..:..x:x.:-----------------...x.::..--..::..:..:x:....x..::::.xx...x....-x:.:.........-...:......:.:..-----------:.x...----...:.:.:....:....:.....:::.x.xx:.:..:..........:...x....x..::.:... 74M4I30M2D29M3D3M1D13M4I12M3I136M2D104M7I14M2I18M14I15M1D20M1D54M1D21M9I12M3D21M4I6M1I124M1D15M3D106M17D9M2I34M1I13M1I15M11I6M4I66M 716/970 73.8% 1037/94230402 0.0% 102/970 10.5% 17366450 NA +3629 chr4 + 190214555 40941706 40941705 40941778 73 CTGCAGCCTCAAATTTCTGGGTTCAAGTGATCTTCCTGCCTCAGCCTCCTAAGTAGCTTGGGCTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x..::...............x.::x.xx.x........:::........x.::.....x.::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 22744580 NA +16780 chr4 + 190214555 40944385 40944384 40945114 730 AATAGAAATTA--------AGCATCTGAGGGCTCTCAGGGTTATTCTTGCAGACATTCCCTCCACGCTATCAAACGAGCCCAAGGCTAATAAGATACGCAGTAATTATAATACGTCTGGCCAAGAGATGTTCTTCTGTGTGTAAATATTTTATGGAGCCAGCACCATGCAATGGTACCTGCAGAGTAAAGTACTGCCTCAGTGAGCCCTAGGGAATCTTAACCACTTCTCATTAATCAGCCCCT--CTTGCTTTCTGTACCTGGAATGCT--GTTTCA----AGAGACCAAAAG------------------------CCATTAAAAAATAAAAACATCCCTGAAAGATGGATATTAACACTAT-TTACTAAGAGGAAGCATTACTGAGATTTCAAATGCAACATGCACAATAATCAAAAAGCTTACCTT-GATGACCTGTTGGGGCAGAAGCAACCAGTGTAAAGAGAAACCACAAGTTACATCTATTCT--------------ACTAAGCTGGTAAAAAGACACTCCGTTTTACCTCGTTCTCTGGGGTGGGAGATGGCGTTACAGAACTAAGTGACCCTTTCCTAGAACCCTGGAGATCTGCTGGGATGGAGACGGGCCGTTCCCACTGAGTCGTTCCTGTTGGGATGTGCCAATAATAGGTCCCGGCAATGTCACTGACTCTTTTCCAGCCAGGCGGCAAATCTGGATCAGTCTGAAATGAGTGATCACTCCATATATCTGCTGAAAAATTGGGGGGCGGGGCGGGGGGAGAAAGAGAGAAT chr4 - 94230402 23572646 23572645 23573365 70657038 70657037 70657757 720 AATAGAAACTACCCTGTAAAGCAGCTGGTGACTCAAATGAATTCTTTGTGTGATACTCCACTC---CTTCTAGGTGAACCAAA----AAGAAGATGC-----AATTACAAATAGTCTAGCAAAAAGATAG-CTATAATGTGCAGAAATTTTATG--------------------TACCCATATAATGGAGTAATGCTTCAGCACATACTAGGCAACTGAAGTCACTTCACATCAATCACGCACTGACTTATTTATTTGAGCTATGATGTTTGATTTCATCCTACACATCCAAAGTTTAGGATGCTTTATGATGCATAGCCATTAGAAAATACA------CATGGAAAATAGATAATTACAACATATTGTCAACAAGAAGCTACACT----TTGGGATAGTATCAGGCCTCATATTCTAAC-GCTTACTTTAGGTAACATTC--------AAACTTGCAATTTCAAGAAAG---------TATGTCTTTTTTTTTTTTTAAATAGCACACAGCACACAACAGGACAGT--GTGTTACCTCAGTTTCTGGAGTGGGAGATGGAGTAATGGAACCAAGTGATCCTTTCCTTGAGCCCTGAAGATCTGTTGGAACAGACACGGGACGTTGCCACTGAGTTGTTCCCGTAGGTATGTGCCAGTAGTAGATTCCAGCAATGTCATTGATTTTTTTCCATCCAGGTGGTAAATCTGGGTCTGTCTGAAATGACTGATCACTCCATATATCTGCTGGGAAC---AGGAGAAAAAATGAAAGAAAAACAGAAAAT ........:..--------....x...:x.:...xx.x.:x.x:.:.xxxx..:.:...x::.---..x::.:::..:..x..----..x.....:.-----.....:..xxx....:..x..:....:x-..x:x:....:.:.x........--------------------....:::.x.:.::....x...:....::x::x.....x..::xx.::......x...:.....xx.x..--...::..x:.xx.x..:x:...:.--:.....----.x.x.:.x....------------------------......:......x.------.x..:..:..:....x.x...x:..-..:::..x.:.....xx:...----..xx:.xx.:.x..x..x:x...x..x..x-......:..-.:.:..x.x:--------..:.xxx..:.x.x....:.:---------..::...x..:.--------------..xx...xx::..x.:....x.--..x.......:x.:.....:...........x..x.::....:......:........x..:.....:.......:...:.::..x.....x....x.........:.....:..x..x........:..:...:.:..:.........:...:.:.......x.....:..:........:..x...........x......................::..x---:..:.x::::xx.:::..:...x...:... 11M8I44M3D17M4D10M5D28M1D23M20D70M2I24M2I6M4I12M24I15M6D25M1I21M4D30M1D9M1I10M8D21M9D12M14I22M2D224M3D30M 456/664 68.7% 720/94230402 0.0% 122/664 18.4% 17371739 NA +3646 chr4 + 190214555 40955852 40955851 40955933 82 TGCAACCTCCACATCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGTGTGCCACCACG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:..:..:xx.xx.:.............x...x.xx.x........:..:.........:.:....--....::....:::. 66M2D14M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 22758725 NA +3482 chr4 + 190214555 40957659 40957658 40957741 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTGCAGGCGCCTACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:...........::x...x.xx.x........:............:.:.:..x.:..--.....:::. 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 22760533 NA +3096 chr4 + 190214555 40961644 40961643 40961704 61 TAATGAAAGAAAAAAAAAAGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA chr4 - 94230402 86999928 86999927 86999988 7230415 7230414 7230475 61 TAAAAAGAAAAAATATAGAGATGTAAAACAACAACAACAAAAAAAAAAAACACAGAAGAAA ...x:.:.:....x.x.:..........x..x..x..x............x.x.:...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -46038284 -48192118 +3146 chr4 + 190214555 40961651 40961650 40961701 51 AGAAAAAAAAAAGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG chr4 - 94230402 21348455 21348454 21348505 72881898 72881897 72881948 51 AGAAAAAAAATAGGCTTAAGAAAAAAAAAAGCACAAAAAAAAAAAAACAAG ..........x..::x...:..........:x.x.............x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 19613196 NA +4323 chr4 + 190214555 40982182 40982181 40982305 124 TCTCAAAAAAAAGGAAAGAAAGAAAAGAAAGAAAAGAAAG-----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 30533160 30533159 30533286 63697117 63697116 63697243 127 TCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAG--AGGAATAAAG ...:...x....:.:.............::.:.:......-----....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx....:.:..--.....x:... 40M5I72M2D10M 83/122 68.0% 127/94230402 0.0% 7/122 5.7% 10449022 NA +3045 chr4 + 190214555 40982187 40982186 40982281 95 AAAAAAAGGAAAGAAAGAAAAGAAAGAAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 28816816 28816815 28816910 65413493 65413492 65413587 95 AGATAAATGGTAGGAAAAAAAGAATGAAAAGCTGACAGAGATAAAAAGAAAGAAAAGAACACATGGAGCTGTTATGAAGCCATGAAAGAAAGAAA .:.x...x.:x..:..:.......x......xx::x.:...x.:...........::..x.x.x::..xx:xx.x...:xx.x............ 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 12165371 NA +3100 chr4 + 190214555 40982233 40982232 40982309 77 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-----AAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..-----....::.......:.:x...:.x:.:::...:... 42M5I35M 54/77 70.1% 82/94230402 0.0% 5/77 6.5% 4123939 NA +3084 chr4 + 190214555 40982241 40982240 40982323 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x..xx.::::.::.:.:....x:.::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 4123947 NA +3115 chr4 + 190214555 40982245 40982244 40982326 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x:.x..xx.::::.::.:.:....x..::.x..::........ 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 4123951 NA +3013 chr4 + 190214555 40982275 40982274 40982329 55 AAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAAGAA chr4 - 94230402 87012031 87012030 87012085 7218318 7218317 7218372 55 AGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAA .:....x.::..:....:..::..:...::......:.x:.......:....:.. 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% -46029756 -48200646 +18415 chr4 + 190214555 40985956 40985955 40987095 1140 AGGTTGTCCCAGAGAAGAAATAAGTGACACATAAATAACAAAAGAGAAGT----TTTGTAAGGGCTCCTAGTTCTATTTGAAAAACCTTTAAGCTCCACAGATCACAATTTTCAAACTTCAATACCTGACCACACAAGAAAGCCAAAAACTTGAATTTGAGACAATCTTCTCAAGCTACTCCATCAACTCAAAATTATTTATTTCCTCCA-TTTATGATTCCCC---TGCCAGTCTAATAAAATAG-TAAGGCTAAAAAAATTCCAAAACAATCCAGAAGCAAGATATAACCAATGAAATACTGTACGTAATAAGAGACTACTTACGCTCTCTGGTTGTCACCATGCAATCCACTCCCAACTCATCTGCTACCAGCATCCTCCAGGTTTTTGAGCTACATTTCTCAGTAGTTTTCTATCCTTCTTC------ACATGACTCCAAAACAGCTTCCCATTCAAA---GCAAAATAAACAGCTTCATGTGTAAACAAGAATTTAGTGAATTAGCCCAAGTAGAATCAG-ATTTTGTGTGGGAGAGTACACATAATGCACACATACTCATTTGCCTGGACATTA----CATTGCTGAAGTTCCACGTGCAAATGGTATCAATGCTTCCTTGTCTGGATGAGCTGGGAA--------CGAGGCCACTAGGAAAA--------------ATGTGTTCA----------TACTGAACTGCCTCCAGTTTGAAAGACACTGATGCAGGATCTGACTTACTCCATTCAAGAGCTGAGATCTAGAAACAGGGACATCTGGTCCTGGAATCTACTGCATTAATC-CATCA----CTCATGAGTGCCACCT--AAATAGCAAAGTCCCTTACACAGCCCTCGTGAAAGCACTGAAGAAAT-CATTCAAAAAGATCTTTATTTCAAATTGCTTGAATAAACATG-------CAGGTGTAAAATAATGAAAAATTATTAAGATAAATT--TAGGAAACAAAGATTCTTTCCAAGGTTCTTAACCGTCAATACGGCAAAGGAGTACGACAGGAATGGGGGAAATTGATTTTGTGAAAGG---CTATTAAAGAGAGTGCTATTCTCATCAGAAAGTCCCTCCCCTTTTAAAATGTAATCAATAATTTAAAGCAAAGCCAAAAATCATATCAGTTAAAAGGACCAGGACA---------TTTCTTTTTGCACAGTATAGGAGGAAAATTAAATTAGTGTCT chr4 - 94230402 23589016 23589015 23590172 70640231 70640230 70641387 1157 AAGCAGCCCCCTGGGAGCTATTTGTGACATGTAAAGGAGAAAACACAAGTCCAGTTCATCTTGGATTTTAAACCTATGT-AAAAACCTATAAGTCCTACAGAACACAAGTCTAAAACATCGTT---TGTCAATTCACTT----------CTTAAAT----GACAAGCAGCTGGAAACACACCTTTAC------AGTATTTAT--CCTGCAGCTTAAGCTTTGTCAGGTATCAGCTGTATTCAACACCTGGAGCTAAGAGA----CATTATAACCCGGAGCTTTGATAAAGTAAAAGAGAAG---------AGAAAGTGTTACTTACAGTTACCAGATGCTCCCATACAGTTCAACATGTACTTATCTGCTACCAGCATCCTTAAAGTTTGCTCTGTACATATCCCAACAGCTTCATATTCTCCTTCTGTGTAGCAC--CTCCAAATCAGTCTCCAGCTCTAACAGGGAAAATACGCTGCT--ATGCTTAACCAGACACTTACTTAATTAGTCTAACAAGGAACAGTGCTTTGGGTGGGAGA--AGAGAAAAGCCAC-----CTCATTCAACCGAAGATAGAAACAATAGAGGAAACACCACATGTTGACCGTACAAATGACTGCGTTTTCTAGTAAGCCAGGAAAACCTGCCAGAGTCTGCTACAGAGGAACTGCAGCAGTGTATGCATTCAGGGTACTCTCTACTGAATTGATTCCAGCTTGCAAGACAGTGATGTATTTTCTGACCAACTCTGCTCAGGAGACAAGCTTTTGAAACAGTACTTTCAGCCCACAAGCACTCAGATATCAATCACATCAAGATTTAATCAGCTCAACTTTGGACCAGAACAGCCCCTCA------CCCTGCAAACCGACCCTAGTAATATATTTATGGTGCTTTTTTTCCTTAGTTGCCTGTATAAATGTGAGAAGAAAAGGTTTAGAAAAATG---TATGGCAAAGATCCACTCGTTGAGGACAAA-ATTCTTCTTAAGGCTGATAACCTCCAACTCCCTGAAGGTGCATTGCAGCAATGGTAGAAATTGATTTAGTGAAAAGCTTCTATTAGCGAGAGCACTGTTCTCATCAGAAAGTCCCTCCCCTT----GCTATAATCAATAATTT-AAGCAAAGCCAAGAATCATATCAGCCAAAATGACCAGGGCAACTGACTTGCTTTTTCTTGCCGAGTAAAG--GTAAAATTAAATTAAAGTCT .:.:x.:...xx:.:..xx..xx......::....x:.x....x.x....----..::.xxx..x.::..:x:....x.-........x....::.:.....x.....x.:.x....x..:x.---..x.x.:x..xxx----------...:...----.....x.xx..x:.:x:..x..x.:.x------.x.......--...x..-:...x.x..:x:.---.::...::xx..xx..:.x-.:::.....:.:.----..xx.:..:..:..:x:xx....x.::x..x..:.x:---------.x..::x::.......:x.:x.::.x..::x....:..:.:..x:x:xx...:..................:x.:....x:xxxx.....x..:..::..:..:x...:..:....------:..:--.......x...::...x::..x..---.x......x:.x...--...:x...x..::x.:...x.x......:.:..xx..:.x...-::....x........--.x.x.x..xx...-----......::x.:.:.x..x:----x..x.xx...::x....:..:x:.:x...:x....x:.x.x.x.::x::.:...::....--------x...x.::...x::.::--------------...::....----------.......:..x:.....:...x......x.....:.xxx......:x....:::...:...x::..x.:.x.......x:x:x..x.x:.x::::xx..xxx::..:....-.....----:.x..x..:x.x..:.--:.x:..x.x..:....:.------..::.::..xxx..:xx..x...-:...:.x::x.x.:...x.:::x.:....:..x.....::..-------x....x..:..x....---x..x::x.....xx.:.--.x.:::.....-......:::....:.xx.....x:...:x.xx::....x.:.:x:...x.....x:...........x......:.---......:x.....::..:.........................----:x.:.............-............:...........::....x.......:..---------:..:..:....xx....x..--.x............:x.... 50M4I25M1D43M3D13M10D7M4D27M6D9M2D6M1I13M3I19M1I13M4D37M9D116M6I4M2D24M3I15M2D43M1I15M2D13M5D19M4I60M8I17M14I9M10I111M1I5M4I16M2I18M6D23M1I42M7I16M3D17M2I11M1D76M3I43M4D17M1D41M9I20M2D20M 695/1073 64.8% 1157/94230402 0.0% 151/1073 14.1% 17396940 NA +3208 chr4 + 190214555 40990284 40990283 40990345 62 CTTCTCTCTCCCTCTCTCTTTCTCCCCTCCCCTCTTGTCTCTCTCTCTCTTTCTCTCTCCAG chr4 - 94230402 90116987 90116986 90117048 4113355 4113354 4113416 62 CTCCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTCAG ..:.::x...:............:.x.:......:.x..:.:.:..:.x:.....::.:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -49126703 -45103699 +3203 chr4 + 190214555 40991149 40991148 40991231 83 ATTTTGTTGTGTGTGTGTGTGTTTTGCTTTTTTTTTTTTTTTTTTTTTTGTAGAAATGAGATCTCACCATTTTGCCCAGGCTG chr4 - 94230402 56475253 56475252 56475334 37755069 37755068 37755150 82 ATTTTGT-GTGTGTGTGTGTGTTTTGTTTTGTTTTCCTTTTGCCTTCTTCATGATGTTGCCTCTAATCACTTTTCTCAATCTG .......-..................:...x....::....x::..:..xxx..x:.x:xx...x.:..:...x.:..:x... 7M1D75M 58/82 70.7% 82/94230402 0.0% 1/82 1.2% -15484104 -78746298 +3676 chr4 + 190214555 40994857 40994856 40994990 134 GGAGAGAGAGAAGGAGGGAGGGAGGGAAGGAGGGAAAGAAATAAAGAAGGAAAATATTACTGTATCTTAAGAAAGATTGTATTGATCAAAAATGTAAGTACCTTAAAAAAAAAAGCAATCATTCCCTTTTCTCT chr4 - 94230402 87012029 87012028 87012160 7218243 7218242 7218374 132 GAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAGCCCATTTCTCTAGAGACATCAGAT--ATAGAACATTTGAAAAACTTAGATTAAGAAGTATTCTTCACATTATTCCT .:.....:x.::..::......:...:...:.......:.xx......::....x.xxx.::.x...:x...:.x..::x..--..x:..x..x.:.:x.x....:.xx..:...:.x..x.:x.x..x.::.. 82M2D50M 82/132 62.1% 132/94230402 0.0% 2/132 1.5% -46017172 -48213230 +3245 chr4 + 190214555 41000018 41000017 41000071 54 AAAAAAAACAAACGTGTGTGTGTGTGTATGTATATGTATATATATGTGTGTATG chr4 - 94230402 23629625 23629624 23629678 70600725 70600724 70600778 54 AAAAAACACACACCTGTGTGTGCATGTCTATATATGTATGTATAGGTGTACATG ......x...x..x........::...x.:.........:....x....::... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 17370393 NA +47797 chr4 + 190214555 41013580 41013579 41014428 849 TACCTGTTTCATCCGGGGAGCTGGGTGAGGCACTGTCTTGGGACAACGTTGTCCAGCTGGACTCCTCATCGCTCGGTGCCAGGTTCTGGATCCGGTGCAGTGCACAGTCGGTTTTGGCCCCTGTTTTCGGATGATCCTTCTTGGTTTCTGGGCTGGATGACACTGTGGCTACTTGGCCGTCTTCAGGGCTGGACTGGGGTCTGTTTGGTTTCTGCAGCAGCAAATCGCCATTCCCAATGATGGTGGAGGCCTGGCCCTGGACTGGCTGGGATTTCTCTTCCGCAGTCCCATGGTGATTGCCTCGGTTCTGCTCTAGTTCTCTGGCTGAGGTTTCCAGATCTGCATAGTAATTTAGGAAGCTCTTAGTTCTCCTGGGCTGGGAGGGTAAAATCTCACAGCTCGAGGAATCCTGTGGGTGGGGCTCTTTACCCTCTAACTTCTCAGAAGTTATGTTGATGACTGCAGTGGGGCTCAGGTTTTTGTTGGGGTCCTGCTGCCCTTGCTCTGCAGCCTTACGGAGCTGGTTCTCCCCATTTTTCACCAGCTTGATGTTGGCAGAGCCATTTCCCAGCAGGGGCTGTGCAGCTGGATCCGAGAGGCCCATGGCCGCCTGGATGTTAGTTAGTGCATATTTTTTCCTGCATTTGGGAGGTGTGCTGTTCTTGGTTTCTGTGTGTTTTATTTCAGCGTTCAACAGTTCATTGTGGGAGGATCGGAGGTTAAGGGTGTTTGGTGGTGTGGCTGGGCTGTTCCGATTTGTGACGTCTGTAGTTCCGCTGCTGGCCATAAACACTGCCAAGGTGTCAACACCTGAGTCAGCTGGGGAAAAAAAA-----AGTCATTAGACACCTG chr4 - 94230402 23597787 23597786 23598625 70631778 70631777 70632616 839 TACCTGTTTCGTCAGGAGAGCTCGGTGAAGCGCTGTCCTGGGACAGTGTAGTCCAGCTGGAGTCCTCATCACTTGGAGCCAGGTTCTGAATCCTGTGTAGAGCGCAGTCTGTTTTGGCCCCCGTTTTGGGATGGTCCTTCTTAGTCTCAGGGCTCGAGGACACCGTGGCAGTTTGGCCATCCTCTGGGCTTGACTG---CTTGTTTTGCTTCCGGGGCTGGACTTCCCCATTGACAATAATGGTGGAAGCCTGGCTGTTGCTTTGTGCAGATTTATCTTCCAT-----CACAGCAA-------AGCTCTGCTCCAGCTCTCTGGCAGACGTCTCCAGGTCTGCATAGTAATTCAGGAAGCTCTTGGTCCTCCTGGGCTGTGAGGGCAATATTTCACAGCTGGAGGAGTCCTGCGGGATCGGCTCTTTGCCTTCAAACTTCTCAGAAGTCACACTGACGCCGGCCGTGGTGCTGAGGTTCTTGTTGGGATCCTGCTGGCCCTGCTCGGCAGCTTTCCTCAGCTGGTTTTCTCCGTTCTTCACCAGCTTCATATTGGCAGAGCTGCTCCCCAGAAGGGGCTGTGCTGCCGGGTCTGAGAGGCCCATGGCTGTCTGAATGTTAGTCAGCGCGTACTTCTTCCTGCATTTTGGAGGAGTGCTGTTCTTGGTCTCGGTGTGCCGGATCTCAGCGTTCAGCAGCTCGTTGTGAGAGGAGCGCAGGCTGAGGGTGTTGGGCGGCGTGGCAGGGCCGTTGCGATTCACCACGTCCGTCGTGCTGCTGCTTGCCATAAACACCGCCAGCGCGTCCACACCGGAATCGACTAGGAAAGCAAGAGAGGCGGTGATGAAACACTTG ..........:..x..:.....x.....:..:.....:.......::..x...........x........:..:..x...........:....x...:..x..:.....x...........:.....x.....:........:..:..x.....x..x.....:.....x::......:..:..x.....x.....---::.....x.:...:.x:..x.x.xx..x.....xx....:........:.......:x.x.x:.x.:xx:.....x......::-----..::.::.-------:.:.......:..:........x..x..:.....:..............:...........:..:...........x.....:..x..:........x.....:.....:...xxx........:..:..x..............:.:::...:.x.x..x....x...x.....:........:........x..:.....x.....:..x.xx........:..:..:..:...........x..:..........:::.:.....x...........x..:..:..:..............:.:...:........:..:..:..:..:...........x.....x..............:..x.....::xx..:..........:...:..:.....:.....x..x...:.:........x..:..:.....x....:...x.....:::x.....:..x..x.:......x...........:....:x.:...x.....x..:..::..:..:..:x..:.-----:..x..x.:....:.. 196M3D84M5D8M7D530M5I16M 648/834 77.7% 839/94230402 0.0% 20/834 2.4% 17415793 NA +3129 chr4 + 190214555 41032750 41032749 41032799 50 ACTTGATTTTAAAGATTCATTTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 57221693 57221692 57221742 37008661 37008660 37008710 50 ATTTGATTTTCAAGGTTCATTTTTTTTCTTTGTTTTTTTTTTTTATTATT .:........x...:.........:..::..x............x..x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -16188943 -78041459 +8133 chr4 + 190214555 41033222 41033221 41033421 200 AAAATGTATCTGACCTGGAAGTACTTCTGACATGGATCACCAGGCGTCAGCAATGGTGCAGGAAATAGGTTATAATTTGAAATCTAAAAAGAAGGGATCATTTGAGAAATTAAAACTCCAAATAACAAAGCATAAAAGAAAGAAAAGCATAGCAGTGAAAATCTCTCCAAAAGCTGTTATATATACCAAACAAATTTTGG chr4 - 94230402 23602795 23602794 23602978 70627425 70627424 70627608 184 AAAGGGGCTCTGACCTGGAAGTACTTCTGACATGGCTCACGAGGCGTCAGCAATGCATCAGGAAATAGATTATAATTTGAAATCTGAAAAG-AGGGATCATGTAAG-AATTAAA---------AACAAAGGAAAACACAAAATAATCCACATT--TCAGAAGCTCCTGAAAGGC---TAAGTATTCTAAACAAACTGTGG ...:x.xx...........................x....x..............xxx..........:................:.....-.........x.:..-.......---------.......x.x..x.x...:x..xx..:.x:--.x.:..x...::x...:..---..x:...x.:.......:.x... 91M1D14M1D7M9D30M2D19M3D23M 147/184 79.9% 184/94230402 0.0% 16/184 8.7% 17430427 NA +3136 chr4 + 190214555 41050677 41050676 41050728 52 TCTTCTAATAAGAAATAAGGAAGAGGGAGGGAGAAGGAATGGAAGGAGAAGA chr4 - 94230402 43002938 43002937 43002989 51227414 51227413 51227465 52 TCTTCTAAAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAGAGGA ........x......x......::..:.....:.:....x..:.::...:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% -1952261 -92278141 +7484 chr4 + 190214555 41065556 41065555 41065814 259 GAGACTGATCCCATACATACATGAGCTGCCTGGACAACAGTGAGCCCATAGCGACAGTCAACACATTGGCAGAGGCCTCGGCAGTTCCCAA-------------GTCCTCAGGAAAGACTGAGATGGTTAGCTGTGGTGGGGGGAGAAAAAAAAAAGGTAGAAACAAAACAGAGACTTAGGATAATGACAGCTTTTTTTTTTTTTTTTTCATTAAAATGCTAATGATGACCACATATTTCCAGATAACCATGTTTATGAATTATTCATAGTC chr4 - 94230402 23610383 23610382 23610620 70619783 70619782 70620020 238 GAGACCCATTGCATACATACATGAGCTGCTTGGCCGATAGTGAGCCCCTGGGTAACGCCTGCCCAT----AATGCCGTCAGCACATCCCCGCGCGCTGTCAGCTGCTCCCAGCGCAGATCGAAATGCTCAGCTGGGGGAGGAGGA---------------------AAGCACAGATTTAGTACAACAGCTG---------TATCTTTTTCATTAAAATGCTAATGACCCTCACAAATTTCAGGCTAACTACATTTATGAATTATTCATGGTC .....:x..:x..................:...x.:.:.........x.:.xx.xx.:.x:.x...----.:x.x.x..:...xx....x:-------------.::.:...x:x...::..:...x.:.....x..x:..:...---------------------..:..x...:....x.:..:::.x.---------.x.:......................:xx:....x.....x:.x....:.::................:... 66M4D21M13I41M21D25M9D72M 160/225 71.1% 238/94230402 0.0% 47/225 20.9% 17455173 NA +3009 chr4 + 190214555 41123812 41123811 41123872 61 CTCTGTCTCACAAAAAAAAACCAAAAAACAAAACAAAACAAAAAAAAACCACAAGTAAATT chr4 - 94230402 21291801 21291800 21291860 72938543 72938542 72938602 60 CTTTGATTTATGCAAAAAAAACAAAAAACAAAACAAAACAAAAAAACAAC-CGAGCATATT ..:..x:.:.::x.......x.........................x.x.-.:..:.x... 50M1D10M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% 19832011 NA +3130 chr4 + 190214555 41123824 41123823 41123873 50 AAAAAAAACCAAAAAACAAAACAAAACAAAAAAAAACCACAAGTAAATTT chr4 - 94230402 51198565 51198564 51198614 43031789 43031788 43031838 50 AAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGGAAACCT ................xx.......xx..x.............x...::. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -10074741 -84155661 +4980 chr4 + 190214555 41125054 41125053 41125275 222 AACACACCCTGTTGTGTGGGCCCTGGAATGAGAACTAT---------TTTGATTGCAGGTGCTGCTGGAATTCAGGGTCATCTGTCCCCACAAGCTACAAAATTTGCTGAAAA-GGCCAGGTTG--CAGGATGGCATAGCCAAAAGCATGTTATTTCATAACTTAAAGCACAAGATTTTAAATTTCACTCAATTATAATAGTCTCATTCCTCTTACATAACAGCAATATGTGAA chr4 - 94230402 23628774 23628773 23628987 70601416 70601415 70601629 214 AACACACCCATTTGTGTAGCATCAGGAATGCAAACTATGTTCAGCATCTTGCTTGGAGGTGCTGCAGGAATCCAGGGTCAACAGCAGCCACGGGCTGTAAAATTTACTCAAAACAGTTAGGTTAATCAATATAGC-------AAAATGTGTGACCTCTTCACCAGAGGCAGAGGGGTCCGA--CTCATTAAATGAGAA----------CCACTAATA-ACCAGAAGCATGTGAA .........xx......:.xx:.x......x:......---------:...x...x.........x.....:........x.x.:xx....::...::.......:..x....-:.::.....:--..:x..:..-------...:::...x.::..x.x..:x:.:...x.:.:x.:::.--:...:.x...x.x..----------..x..x.:.-.x...x.::....... 38M9I66M1I10M2I9M7D39M2D15M10D9M1D16M 139/202 68.8% 214/94230402 0.0% 32/202 15.8% 17496280 NA +3525 chr4 + 190214555 41159880 41159879 41159947 68 AAAAAAAAAAAAAGGAAGAAGAAGGAGAAGGAGGAGGAGGAGG---AGGAGGAGGAGGAGGAGGAGGAGAA chr4 - 94230402 40472549 40472548 40472619 53757784 53757783 53757854 71 AAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .....:...........:..:......::..:..:..:..:.:---.:....x.:.::..:x...:..... 43M3I25M 50/68 73.5% 71/94230402 0.0% 3/68 4.4% 687331 NA +3149 chr4 + 190214555 41159907 41159906 41159981 75 AAGGAGGAGGAGGAGGAGGAGGAGGAGG------AGGAGGAGGAGAAGGAGAAGGA---GAAGGAGAAGAAGAAGAAGAAGAAG chr4 - 94230402 49393627 49393626 49393710 44836693 44836692 44836776 84 AAGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAG .....x..xx..:.x.:.....x.....------...x:...:xx...:...x...---.......:......:.......:.. 28M6I22M3I25M 58/75 77.3% 84/94230402 0.0% 9/75 12.0% -8233720 -85996682 +3195 chr4 + 190214555 41169160 41169159 41169232 73 GGCGACAGAGCAACACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGGAAGAGGACAGAGAGGAAGGAAAGGT chr4 - 94230402 37322372 37322371 37322441 56907962 56907961 56908031 70 GGTGAAAGAAAAGC---CCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGT ..:..x...:x.:.---..x.x:......:..............:..::....:.x.x:.....:.:..:... 14M3D56M 51/70 72.9% 70/94230402 0.0% 3/70 4.3% 3846788 NA +3035 chr4 + 190214555 41229215 41229214 41229262 48 TTTCTTTCTCTCTATTTCTCTCTTTCCCCCACCTTTCTTTCTTTCTTT chr4 - 94230402 31754642 31754641 31754689 62475714 62475713 62475761 48 TTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTTT ...x.........x........x.......x.....:...:.:::... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 9474573 NA +7967 chr4 + 190214555 41257138 41257137 41257742 605 CTCGCGCCGTCTCTGGCCCCCTCCCCCGCGAGCGCCGAGGCGGGGGC--GCCCACC---------------------GGTTCCG-GCTGC-----------TGGCAGGGACCAAGCCGC---CCGCTGCG-AGCACCGGAGA---CGGCCGGGCTGGGGCGTGGGCTGGGCGCCTTTCCTGGGCCCCTGCATTTAGCGGGTGACTCTACGAAACCGGTCACGGGGAGACGGAGGGGGCTGCGCCCCGTGGCGAGCGAGCGCCAGGCGGAGCTCCCGAGGGCGTG-GCGCGGGCAGCACAGACTCG----------------------------GCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTCATTGCGCCGGCCCGGGTGGGGGTGGCAG----GGCGGGACT----GGGGCTCCTCCCAGGCTCGGGTGCGGGCGCGGAGGGCGCGCGCCTCCTGGCCCCGCCCCCTGGCAGGTGCCCGCGACCCGCGTGTCCCCGTGCGCCTGG---------CCGCCTTGTCTCCTCT-----CCGCAGGTGCTGTCCCGGCTGGGGGT---CGCCGGCCAGTGGCGCTTCGTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGGCTCGGTGCCAGCGCCTGCCTGCGCGCTGCTGCTGCTGTTTCCCCTCACGGCCCAGGTAGG chr4 - 94230402 23677589 23677588 23678241 70552162 70552161 70552814 653 CCCGCGCTG-CTCCGCCCTCTCCCCCCGCG-GCGGCGCGGAGTGGGCCGGCCCGCCTCTATATATCGGCCGGTGGGCGGCTCCGCGCTGCAGCGTCGACGGTAGCGGGGAGCGGTGCGCAGGTGGTTGTGCAGTGCTGGGGAACGTCGCCGGAGCAGCGCGCAGGC--AGCCTCCCTCCTGAGCCATGGCGT------GGCAGCCCATGGAGATCAACCCCGAGGTg-cgcggggggccgggc---gcggcgggc----------cggggT------GGGCGAGCGAGCGAGCTGCGGTTACTCACCTCTCTCCCCCTCATTGTCTTCCAGATGCTGAACAAAGTGAGTCGCCGCCGCGGCCCGGCCGTTCCCTCTCCCTCCGCCCTCGGCACTCCCGGACGGCGGTGGCCGCACCTGCGGGGCTAcgcggggccgcgccc----ccggg--cgggcggcgATGGCG-GCGCCGCGTTGTGCTG-----TGTCACGGGGGCGCGGCCGGAGGGGG---GTGGGTGTGGGGAACGGCCCCGCTATTCCATCGCTGTGCCCCGCAGGTGCTGTCCCGCCTCGGGGTGAGCCCCGGC---TGGCGCTTCGTGGACGTGCTGGGCTTCGAGGAGGAGGCTCTGGGTGCCGTTCCCAGCCCGGCCTGCGCCCTGCTGCTCCTCTTCCCCCTCACCGAGCAGGTAGG .:.....:.-...:.x..:.::........-...x..x..x.x....--....:..---------------------..:....-.....-----------.:..:....x.::xx...---:x.:..:.-..::.:..:..---:x.....:x::.x...::...--:..x:.::.....:...x:x..:.------..:::.:.xxx..:.:.:::.x..:..x.-..x:......:.x..---.:....:..----------...:.:------.....x.-.x...:..x..:xxx....:----------------------------....x..:::x.xx.:x.x....:..xx:x.....:x.::.x.x.:x:xx.x:.xx..xxx.....::..x......x.----x.....:..----.....:x.x...----:....--......xx..x....-.....x.x.x.:x.:.-----..x..x.x.xx....:..x.x.x.xx---...x.:x...---------....:x.x:.x:.x..-----.................x..x.....---.x.....---.......................x:.x..:......x.......:x.x..x..x:xx..x........x........x..x..:........x.xx........ 9M1D20M1D16M2I7M21I7M1I5M11I18M3I8M1I11M3I21M2D24M6D29M1D15M3D9M10D6M6D7M1I20M28I79M4I9M4I12M4D5M2D15M1D16M5D26M3D10M9I16M5I26M3I7M3D104M 381/557 68.4% 653/94230402 0.0% 144/557 25.9% 17579549 NA +9042 chr4 + 190214555 41260640 41260639 41260805 166 TTCGCAGCATGAGAACTTCAGGAAAAAGCAGATTGAAGAGCTGAAGGGACAAGAAGTTAGTCCTAAAGTGTACTTCATGAAGCAGACCATTGGGAATTCCTGTGGCACAATCGGACTTATTCACGCAGTGGCCAATAATCAAGACAAACTGGGATTTGGTAGGTGT chr4 - 94230402 23679153 23679152 23679318 70551085 70551084 70551250 166 TTTACAGCATGAGAACTTTAGGAAACAACAGACTGAGAAAATAAAGGACCAAGAAATCAGTTCCAAGGTGTATTTCCTGAAGCAGACTGTCAGTAACTCCTGTGGGACGATTGGTCTGATACACGCAGTTGCTAATAACAAAGACAAAGTTAAACTTGGTGAGTAT ..::..............:......x.:....:...::.:x.:....:x......:.:...:.:..:.....:...x..........::.::.x..:........x..:..:..x..x..x........x..:.....:x........x.x::.:.....::..:. 166M 122/166 73.5% 166/94230402 0.0% 0/166 0.0% 17581487 NA +7381 chr4 + 190214555 41261674 41261673 41261927 254 TATTATTTTACCTATACTAACACATCCATTTTTTTTTTAAGAGGATGGATCAGTTCTGAAACAGTTTCTTTCTGAAACAGAGAAAATGTCCCCTGAAGACAGAGCAAAATGCTTTGAAAAGAATGAGGTAAGAGAACT-TACAGA---------GCATGGCCTTTAAATAACTCTAGAGATTTTTGTGCTAATTATTTTCTTTTTTCCGCAGGCCATACAGGCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGTCGGGTAA chr4 - 94230402 23680515 23680514 23680765 70549638 70549637 70549888 251 TGTTTCTCTACCTGTGCTGAAGAATA---TCTTTTGTGCAGATGAGGGATCTGCCCTGAAGAAATTTCTTGATGAAACAGCTGATCTGTCTCCTGAAGAGAGAGCTAAGCGTTTTGCAAATAATAAGGTATATGAACTACACAAATTGCTGTCAGCATTGTCACTTAACGGATACAGTAACTTATAT-----CTGCTTTCTCTT-----AAGGCTATACAAGAAGTCCACAACTCTGTTGCACAGGAAGGACAGTGTCGGGTAA .:..x:.:.....:.:..:.x:x..x---.:....x.xx...x..x.....x.::.....:x.:......xx........xx:.xx....:........x.....x..::.:....x...x...:.....x:x.....-:...:.---------....x.:.x:.x..:::x.x:..x:.:..x.:.-----:.::.....:..-----x....:.....:.x..:...::.:x.:..x...........x..:.......... 26M3D109M1I6M9I33M5D12M5D55M 164/241 68.0% 251/94230402 0.0% 23/241 9.5% 17581159 NA +3949 chr4 + 190214555 41263215 41263214 41263298 84 CTTTCTTTAGGTAGATGACAA---GGTGAATTTCCATTTTATTCTGTTTAACAACGTGGATGGCCACCTCTATGAACTTGGTATGTT chr4 - 94230402 23681139 23681138 23681225 70549178 70549177 70549264 87 CTGCCCTAAGGTTGAGGACAACAGTGTGAACTTCCACTTCATCCTGTTTGCTAATGTGGATGGACATCTGTATGAACTGGGTAAGCT ..x:.:.x....x..x.....---x.....:.....:..:..:......:x:..:........x..:..x........x....x.:. 21M3I63M 63/84 75.0% 87/94230402 0.0% 3/84 3.6% 17582076 NA +3951 chr4 + 190214555 41264087 41264086 41264163 77 GGCTTCTTTGTTACAGATGGACGAATGCCTTTTCCGGTGAACCATGGCGCCAGTTCAGAGGACACCCTGCTGAAGGT chr4 - 94230402 23681554 23681553 23681630 70548773 70548772 70548849 77 GGCCTTTATTTCACAGATGGGCGTTTGCCATTTCCTGTAAACCATGGCACAAGCTCAGATGACTTGCTATTGAAGGT ...:.:.x.x.:........:..xx....x.....x..:.........:.x..:.....x...x:x..::....... 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 17582533 NA +8721 chr4 + 190214555 41267961 41267960 41268421 461 ATTTTAATGACATTTCTCCTTTCCAGGACGCTGCCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCTTCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAATGCTCTGTGGGAGGGACTTTGCTGATTTCCCCTCTTCCCTTCAACATGAAAATATATACCCCCCCATGCAGTCTAA-----AATGCTTCAGTACTTGTGAAACACAGCTGTTCTTCTGTTCTGCAGACACGCCTTC-CCCTCAGCCACACCCAGG--------CACTTAAGC-----ACAAGCAGAGTGCACAGCTGTCCACTGGGCCATTGTGGTGTGAGCTTCAGATGGTGAAGCATTCTCCCCAGTGTATGTCTT-----GTATCCGATATCTAACGCTTTAAATGGCTACTTTGGTTTCTGTCTGTAAGTTAAGACCTTGGATGTGGTTTAATTGTTTGTCCTCAAAAGGAATAAAACTTTTCTGCTG chr4 - 94230402 23681881 23681880 23682313 70548090 70548089 70548522 433 ATCTAAACAGCTATTTTTCTCTTAAGGATTCTGCTAAGATCTGCAGACAATTTACAGAACGTGAAAAAGGAGAAGTTCGTTTTTCTGCTGTGGCTTTCTGCAAGTCTGCCTGAGGCTCTGAAGGAAAGCAGT--CTAAT----------------AGCACACAAGTA----------AATGCAGTCAAAACTCCAGTGCTTCAGTACTTGTTAAACACAGCTGTTCTGGTAACTTAAAT---TGTTTCCACCCTTTGCTATACACAGAAGCAACATCGCTTGAGCTTATGATAAAGGATGAGCTCAAGTTTTAATGTGAACAGTTTGG--------ACACATGATG--------TCTTTAGACTCTGTTTTTTCACATGTTGAGTAGAAAGTGCTTAACAGGGCTTGTTTAATCTATGTCTATTAATGGAGCTATTGGTTG----ATATTTCCTTGTCCTTAACGAGAATAAAAC-TTTCTGCTG ..:.x..:::.xx..:.:..:.:x....:x....:...:........x....:..x..:.....:x..........:..:..:.....:......:........x.x....:.x......x:...::.xxx.--..:..----------------.:..::x..:..----------x........x..-----.:...............x...............xx.:x::.:x.x---:.::.:.-....:x..:.:..x...:--------.:...:...-----.:..:x::x.x..x..:x.x.:x.:xx.:x..x.x...--------x..x...:..--------..:::..xx.x...:..-----:.:.:x::..xxx.::....x.x.x....xx...::.:.x.....:.x.:.x:..x:x....x..----x..x..x:.......:..x::.........-......... 132M2D5M16D12M10D12M5I45M3D7M1I18M8I9M5I38M8D10M8D17M5I65M4D30M1D9M 273/409 66.7% 433/94230402 0.0% 76/409 18.6% 17586080 NA +3676 chr4 + 190214555 41291593 41291592 41291672 80 CACTTGCTGCAACCTCCACCTCCCAGGCTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTATAGGCGCAC chr4 - 94230402 18197120 18197119 18197199 76033204 76033203 76033283 80 CATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:x.x..:..:..:xx.x..:.::..:.......x...x.xx.x........:..:.........:....:.x.:.... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 23094473 NA +4256 chr4 + 190214555 41292814 41292813 41293002 189 TATAGATGTCTTTTCTAAGAAAGAAAGAGAGAGAGAAAGAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGA-AAAGAAAAGAGAAAAGAA---AAGAGGGAGAGAAGGAGGGAGGAAAGAAAAGAAAAGAAACCAGAA--------TGCCAGAA chr4 - 94230402 44053957 44053956 44054152 50176251 50176250 50176446 196 TAGAGCTGTAATGTCTGTGTAAGGGATATGTGAAGAATG-----GAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAATCCATCTTGCCAGAA ..x..x...xx.x...:x.x...::.x.x:x::....x.-----..::.........::...:.::x......:x::.:.:.x::.xxxx:.............:.x....:x:..x.-......x...:.:..x..---..:..x.:.x.:.x:.:...:.....:.:..x.:x..:..x::..--------........ 39M5D74M1I18M3I45M8I8M 117/184 63.6% 196/94230402 0.0% 17/184 9.2% -2761143 -91469259 +3899 chr4 + 190214555 41292826 41292825 41292978 153 TTCTAAGAA---AGAAAGAGAGAGAGAAAGAGAAAGAAAAGAA--------AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGGGAGAGAAGGAGGGAGGAAAGAAA chr4 - 94230402 21758888 21758887 21759058 72471345 72471344 72471515 171 TTCAAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA ...x...:.---......:...:...x...:...:::.::.:.--------.x..:x.x:x...x..:x.x.:...x.x:x..x..x.:.....-------......:..............:::.:...:.x.:.x......xxx:.:...:..xxx.x:..::..:... 9M3I31M8I43M7I70M 100/153 65.4% 171/94230402 0.0% 18/153 11.8% 19533938 NA +3431 chr4 + 190214555 41292849 41292848 41292947 99 AAAGAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAG--AAAAGAAAAGAAAAGAGAAAAG chr4 - 94230402 56098454 56098453 56098554 38131849 38131848 38131949 101 AAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGAGTCAAG ...x....:...x...:..xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx....:..x--.....:...xx..x...xx... 77M2I22M 66/99 66.7% 101/94230402 0.0% 2/99 2.0% -14805605 -79424797 +3352 chr4 + 190214555 41292870 41292869 41292951 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx....::.::.::..:.x..::.x:........... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 4434576 NA +3237 chr4 + 190214555 41292872 41292871 41292943 72 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..x::..:x::...::::....::..........x.........:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 16225887 NA +3014 chr4 + 190214555 41336120 41336119 41336166 47 CTCTGTCTGAAAAAAAAAGAAAAAAAAAAAAAGAAAAATAGAAATGG chr4 - 94230402 71886276 71886275 71886322 22344081 22344080 22344127 47 CTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGG ..x....x..................:....:.x.....::..x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -30550156 -63680246 +3419 chr4 + 190214555 41338096 41338095 41338169 74 CTGCAACCTCCACCTCCCGGGTTCAAGAGATTCTCCCACCTCAGCCTTCTGAGTAGCTAGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:.........x.x...x.xx:x.........:::.......:.:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 23140970 NA +3081 chr4 + 190214555 41343921 41343920 41343993 73 TTTCTCCCCTTAAAAAAAAAGGTATTGTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAATC chr4 - 94230402 68107288 68107287 68107360 26123043 26123042 26123115 73 TTTTCTCTCTTAAAAAAAAAAAAATCCTCTCAAAAAAAAAACAAAAAAAAACAACAAAACACACACAGAAATC ...:::.:............::x..:x.xx.x.........x.........x..x....x.x.x:x.:..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -26763367 -67467035 +3186 chr4 + 190214555 41343932 41343931 41344022 91 AAAAAAAAAGGTATTGTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAATCAATCCATTATTTTTCCTTTTTCTACTATA chr4 - 94230402 20885184 20885183 20885274 73345129 73345128 73345219 91 AAAAAAAAGGATATTTTTTTCCAAAAAATAAAAAAATAAAATGAAAGAAAGAAAAGCAAGCCACAGTATTTTCTCTTCTGGTCTTACTATA ........:.:....x.xx::x......x.......x....x:...:.:.:..:.:x..::..xxx:...x.:.:.:..xx.::....... 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 20458748 NA +5601 chr4 + 190214555 41360780 41360779 41361008 229 GCGGCGGCGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAG---CCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGGT-AGGTGCGGGTGGCTGGCGGGCGGCCTTGCACTGGCGCCCTGAGCCACGGAC---CCGCGCACGCTCCGACCGC chr4 - 94230402 23705496 23705495 23705726 70524677 70524676 70524907 231 GCAGCGGCACAGGCTGCGGCGCTCCCCGGCCGGCGGCTCGGCGCTCCTCGCGGCTCC-CCGATGGCCAGCCCCGCGCTGGAGCTGGGAGAAGCGCAGCCCCCGC---CCGACTCCCCGCAGCCCGAGCCGGCCTTCGGCGAGGCGCAGAAGTGGATCGAGGTAAGGCGACGACAGCGCGGTGCGGGCGCCGTGCCGCAGTCCCGAGCCGCCGCCTGGCCGCGGA-GCTCCGGCGGC ..:.....:xx...x.....xx...:.:x..x.xx...:.:x:xxx.x..x....x.-.x:.....:x.:.....x..x.:x....:..xxx:x.......:..---....x---....xx........x......xx..................:.....-...:.xx.:::..xx.xx.xx...x::.::.:.xx.:..:.....:.x.x.---.....x.-......:.x.. 57M1D46M3D5M3I47M1I51M3I7M1D11M 150/224 67.0% 231/94230402 0.0% 12/224 5.4% 17655284 NA +3065 chr4 + 190214555 41396513 41396512 41396556 44 GTGCGGGTTTTTTTTTGTTTTGTTTTCTTTTGTTTGTTTGTTTG chr4 - 94230402 54111254 54111253 54111297 40119106 40119105 40119149 44 GTGCAAATCTTGTTTTGTGTTGTTTTTTTTTGTTTGTTTGTTTG ....:::.:..x......x.......:................. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -12714741 -81515661 +3133 chr4 + 190214555 41398113 41398112 41398234 122 AAAAAGAAATGTTGAAGAACTTGGAATTCATCCCTTTATCCCATTCATTTATTAAGAGTTTTCTTTTTTTTTTTTAGTTTCTATTATTTTTATTTTAT----TTTTTATTATTATTATACTTTAAG chr4 - 94230402 86565893 86565892 86566017 7664386 7664385 7664510 125 AAAAAAAAGTTATAAAAAACCCTAAACTCAGCTCTTTGTTTCTTCTGATTTTTCTGAGTTTTTTTTTTTTTTTTTTCCTCCT-TCCTTCTTAAATGATGAAACTAGCATTATTATTCCAGGTTAAG .....:..:.xx.:..:...::x:..:...x.:....:.::.x.:::x..x..xx.......:............xx:.:..-.:x..:...xx.x..----:.xx:.........x:.xx..... 82M1D15M4I24M 78/121 64.5% 125/94230402 0.0% 5/121 4.1% -45167780 -49062622 +3261 chr4 + 190214555 41419662 41419661 41419834 173 TTCCTTCCTTCCTTCC-TTCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTTCTTCCT----------CCCCTCCTTCTTTTCTTCCTTCC--TGCCCTTTTCCCTCCTCTCCTTCCTTTCTTCCTCTCTGCCTTCCTCCTTTCTTCCCTTCCCTCTTCCCTCCCTCT chr4 - 94230402 23845929 23845928 23846114 70384289 70384288 70384474 186 TTTCTTTTTCCCTCCAGTTGCTCTGGATTTGTTTTCTTTTTGTATTTTATTTGCTCAGTTTCCTCCCTGTCTCTCTGTTGTGAGAACATATATTCCTTTTCATACATGCGTTACCTTTGTCCCTCCTGTCCTCCTCATCTGATCCTCTTCCTGCTCCTTGCATGCCCCTTCCTCCTCCATCCCTCT ..:...::.:...:.x-..x...:xxx:..x:..:...::.x:x..::x.::x::.xx::....:...x...::..----------.x:x.x:.:......x.x.x.x.--.:..:..x........x....:.::x...xx::....x...x.::.:.x:x.x...:.:....:...x....... 16M1I59M10I23M2I75M 102/173 59.0% 186/94230402 0.0% 13/173 7.5% 17573733 NA +6607 chr4 + 190214555 41432934 41432933 41433155 222 TCTCAAAGGGTTAATACCCTGGAATTTCACACTTAAC---AATCGGCATTATGTTCTTTGCATTCTTGAGGAATTTTCTCACTGATGTCAAAAGACTTTGGTTTGTTATGCAAGACAGTGGTCCAGTGACTTTGCATATCACATTCTCTTAACATGAGGGAAATCCTTGCATGCTAATTGGAGAAGGAAAAAAGTAGTGCAAGTGGTTCTTTGGCTACAGATGAA chr4 - 94230402 23745194 23745193 23745405 70484998 70484997 70485209 212 TCTTAAGGGGTTAATGATGTGGAATTTCACACATAATGCAAAATG--ATTATGCTGTATGCATTCTCTGTGAATTTTCTCACTGATCACAAAAGACTTTTGTTTGGTGTGTTAG--AATGGTCTGCAGACTAAATGTACCCTGTTCTTTTAATTGGATAGAAAATAACTC-TGCTAATTGGAGAA--AACTGAATAAGGCAGTTGGT------GCTACAGGTCAA ...:..:........:x:x.............x...:---..x:.--......:.x.x........:x:x................xx...........x.....x.:..:x..--.:.....::xx....xx:::..:.x::....:....:xx..x:....x:xx:x.-..............--..xx:.:..:x...:x....------.......:.x.. 37M3I5M2D67M2D54M1D14M2D20M6D12M 149/209 71.3% 212/94230402 0.0% 16/209 7.7% 17687740 NA +3358 chr4 + 190214555 41444257 41444256 41444341 85 TTACATATGACTGAAATATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964800 14964799 14964884 79265519 79265518 79265603 85 TTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:...x::x..xx:.:x.:::.x:.:.:.x..:...x.:::::......:........xx........::............. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 26479457 NA +3181 chr4 + 190214555 41444269 41444268 41444335 67 GAAATATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACAC chr4 - 94230402 14964818 14964817 14964884 79265519 79265518 79265585 67 GACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:.x..:.:.x..::....::::x....:...:....:.xx:.......::............. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 26479451 NA +3042 chr4 + 190214555 41444272 41444271 41444338 67 ATATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:..:..:x::....:.x.:x:.:...:..:x..:..xx.:.................x..... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 33048476 NA +3169 chr4 + 190214555 41444272 41444271 41444346 75 ATATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.........:::.:x:::x..:.x.:::...:...::x:...:xx.:.................x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 33048484 NA +3548 chr4 + 190214555 41444272 41444271 41444337 66 ATATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x:.....x.::.....::x::....:........:.xx........::............. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 26479453 NA +3505 chr4 + 190214555 41444274 41444273 41444356 83 ATATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:...:.:...:..::.:x:x:...:.x.::....:...:.x:...:xx.:.................x.....x.::x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 33048486 NA +3956 chr4 + 190214555 41444276 41444275 41444367 92 ATGTATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACACACACACACACATATATAGAGTGCA chr4 - 94230402 8395788 8395787 8395879 85834524 85834523 85834615 92 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA ....:...:.:....::.:.:::...:.x..:....:..::.x:...:xx.:.................x.....x.::x...x.:.::x.. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 33048488 NA +3709 chr4 + 190214555 41444279 41444278 41444362 84 TATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACACACACACACACATATATAGA chr4 - 94230402 8395789 8395788 8395872 85834531 85834530 85834614 84 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA .:............::x:x:::...:.x..:....::.::.x:...:xx.:.................x.....x..:x...:. 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 33048490 NA +3440 chr4 + 190214555 41444280 41444279 41444339 60 ATGTGTATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:...x..:.....x::::....:.:......:.xx........::............. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 26479455 NA +3349 chr4 + 190214555 41444285 41444284 41444343 59 TATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x..:.x...:::::..:...:....:...xx........::............. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 26479459 NA +3196 chr4 + 190214555 41444286 41444285 41444345 60 ATGTGTGTGAGTGTGTGTGTATATATATACACACACACACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:...x..x.....::::::.:...:..:.:...xx........::............. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 26479461 NA +3775 chr4 + 190214555 41445081 41445080 41445154 74 CTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::........::x...x.xx.x........::.:................x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 23247955 NA +6854 chr4 + 190214555 41462627 41462626 41462777 151 TTGAAATTTTGAACTTTTATACATAACATAAA---CTGAAAAGAGCA--CAAGTTTTATACCAATGACCCAAAACCACAAAGCAATTTACTTTTATTAACATTGGAGTAAATACCAGTGTTTGCTGGCTTGTGGCTTGGATATGAAACATAAAAGA chr4 - 94230402 23752576 23752575 23752731 70477672 70477671 70477827 156 TTCAAATTGCAAACCATGCTACGTAAAACCAAATTCTAAAGTGATCTGTCTGGTTTTAGACCAGTAACCAAAGACCACAAAGTAACCTACTTTTATTAGTCTTGGAGAAAATTCTAGTGTTTGCTGGCTTGTGGTTTGGATGTGAAATATGCAAAA ..x.....x::...:x.xx...:...x.:x..---..:..:x..x.x--.x:......x....:.:...x..:.........:..::...........::x......x....x.:...................:......:.....:..:x..:. 32M3I12M2I107M 112/151 74.2% 156/94230402 0.0% 5/151 3.3% 17710051 NA +3493 chr4 + 190214555 41466034 41466033 41466116 83 CTGCAACCTCCGCCTGCTGGATTCAAGTGATTCTCCCGTTTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..x....:........x...x.xx.x:.......::::.........:......--..::......::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 23268908 NA +3187 chr4 + 190214555 41467110 41467109 41467205 96 TTTTTAAAAGCTGAGTAATATTCCC------ATATATATATGTGTATGTA----TATATACACACACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395757 8395756 8395862 85834541 85834540 85834646 106 TTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x..x.x:.x..:x..x......------..:.:.:.......:::..----.:...x:...:.:::.::.x:...:xx.:.................x..... 25M6I19M4I52M 66/96 68.8% 106/94230402 0.0% 10/96 10.4% 33071353 NA +3434 chr4 + 190214555 41467127 41467126 41467184 58 ATATTCCCATATATATATGTGTATGTATATATACACACACACACACACACACACACAC chr4 - 94230402 14964827 14964826 14964884 79265519 79265518 79265576 58 ATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:..:x.:.:.::.:.:.............:.xx........::............. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 26502300 NA +3076 chr4 + 190214555 41467134 41467133 41467196 63 CATATATATATGTGTATGTATATATACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964822 14964821 14964884 79265519 79265518 79265581 63 CAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x....:.x..:..:..:.:.::.::.:::.:.:...xx........::............. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 26502312 NA +3098 chr4 + 190214555 41467134 41467133 41467193 60 CATATATATATGTGTATGTATATATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395803 8395802 8395862 85834541 85834540 85834600 60 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....x.:..:.:.x..::...:...:.x:...:xx.:.................x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 33071331 NA +3036 chr4 + 190214555 41467136 41467135 41467197 62 TATATATATGTGTATGTATATATACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.::.....x..:....::.::.x:...:xx.:.................x..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 33071335 NA +3106 chr4 + 190214555 41468312 41468311 41468381 70 CTGCCCTGCCTTCCCTGCTCCCCTCCCCTCCCCTCCTCCTCCTCCCTCCCTCCCTCCCCCTCCTCTCTCC chr4 - 94230402 90116977 90116976 90117046 4113357 4113356 4113426 70 CTGTCTTGCACTCCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTC ...:.:...x:.........:.:::.:..::.:..x:..:.....:.:..:...::::x..:...::.:. 70M 43/70 61.4% 70/94230402 0.0% 0/70 0.0% -48648665 -45581737 +3174 chr4 + 190214555 41486938 41486937 41487010 73 CGCCCAGCTGATATATATATATACACACACACACATACATACACACACACACACACACACACACATATATATA chr4 - 94230402 17520739 17520738 17520811 76709592 76709591 76709664 73 CATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:::...:::.:.x.......x.....x.:..........:::x.::.x:::.:.x.....::.......... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 23966199 NA +3088 chr4 + 190214555 41486948 41486947 41487008 61 ATATATATATATACACACACACACATACATACACACACACACACACACACACACATATATA chr4 - 94230402 8395810 8395809 8395870 85834533 85834532 85834593 61 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:...x..:...:::.::.x:....xx...................x.....x..:x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 33091138 NA +3032 chr4 + 190214555 41486973 41486972 41487025 53 TACATACACACACACACACACACACACACATATATATATACACACGTACATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..:x.x..x...........x..........x....::..:::.....:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -45885768 -48344634 +3020 chr4 + 190214555 41487646 41487645 41487699 54 TTATATTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGC chr4 - 94230402 5847642 5847641 5847695 88382708 88382707 88382761 54 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..x...x...............:.::.........x.xx....:....:x.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 35640004 NA +3193 chr4 + 190214555 41493443 41493442 41493557 115 AAAAATATTAAAAAAAAAAAAAGCATCTGTTTTTGTTGTCATTATTTCCTAAACAATACA-GTGTAACAACTGTTTATATAGCATTTATATTATATTATGCAGTGTAATCTGGAGA chr4 - 94230402 40699407 40699406 40699518 53530885 53530884 53530996 112 AAAAATGTTGAAAATAAAAAAGGCATGAGTTTTTGTTGTTTTTTTTTCCCCCACTATTCACTTTTAACAAAGGGTTCTATGAA----AAAATATATTTTGAAATATCAATTAGAAA ......:..:....x......:....xx...........:x..x.....:xx..x..x..-x.x......xx.x..x...::x----.x.x......x..x.:.:.x.x:.:..:. 60M1I22M4D29M 77/111 69.4% 112/94230402 0.0% 5/111 4.5% 794036 NA +4144 chr4 + 190214555 41494320 41494319 41494486 167 CATACATATATATACACATACATATATATACATACGTACA--CATACACATACATATATACACATACATACATATACGTACATACACATAAACATACATATATACACATACATAGTTATATATATGTACACACACATACACACA-CACATATATATATGATTGGACTTCT chr4 - 94230402 73121106 73121105 73121266 21109137 21109136 21109297 161 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTT---------CAGATACGCTCAGCCCATACACCGATGCTTTGACATTT ...:.....x:.........:.:.:.x.x:...:x.....--.:..:.x:....::x:..:.::.:x:........x:...::x....x.:...:....:....x:..x.:x.xx....x.x.---------..x....:.x..-.x....:.:xx...x..x...x.:. 40M2I81M9D12M1I25M 103/158 65.2% 161/94230402 0.0% 12/158 7.6% -31626786 -62603616 +3871 chr4 + 190214555 41494330 41494329 41494469 140 TATACACATACATATA-TATACATACGTACACATACACATACATATATACACATACATACATATACGTACATACACATAAACATACATATATACACATACATAGTTATATATATGTACACACACATACACACACACATATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATG------TGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.....x:...x.x.-.:..xx:x...:::...:..:..x....:.:.:.:.:...x.x::..:x........::...:::.:..:x:....::------.::x..:.....x:...:.x....x.x.......::.... 16M1I78M6D40M 84/134 62.7% 135/94230402 0.0% 7/134 5.2% -31626745 -62603657 +3362 chr4 + 190214555 41494340 41494339 41494406 67 CATATATATACATACGTACACATACACATACATATATACACATACATACATATACGTACATACACAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .......:...:...::...........:...:....x:.x:.x..x:::.....:xx.....:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -25410506 -68819896 +3090 chr4 + 190214555 41494434 41494433 41494471 38 TATATATATGTACACACACATACACACACACATATATA chr4 - 94230402 66904848 66904847 66904885 27325518 27325517 27325555 38 TATATGTACGTACACACACATACACACACACATATTTA .....:..:..........................x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -25410414 -68819988 +6348 chr4 + 190214555 41494472 41494471 41494613 142 TATGATTGGACTTCTTGATTAAAAAAGAAAAACTT---ATGT-----GCTCTTTTTCTTTTCT---TTTTTGCAGCAAGTAACTGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGTTTAGAAAATGGAATCCTCCTCTGCGAGTAAGTA chr4 - 94230402 23766198 23766197 23766343 70464060 70464059 70464205 146 TATGATTTG--CTCTTGA-----AAAGAACACCTTTTAATGTATGCCGCTCTTGTTTCCCTCTGTGTTTTTGCAGCAAGTGACTGGCAGAAGTTTTGGTGAGAAGGACTTTCGTTCTGGATTAGAAAACGGCATTCTTCTGTGTGAGTAAGTA .......x.--:......-----......x.x...---....-----......x..::::...---..............:....................x..:..:.....xx.x..x........:..x..:..:..x..:......... 9M2D7M5D12M3I4M5I16M3I87M 112/135 83.0% 146/94230402 0.0% 18/135 13.3% 17728274 NA +7679 chr4 + 190214555 41524394 41524393 41524552 159 CCTTTTTCATGACAGGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACCCCCATTGCAGGACTGGTGAGTACGTGGAATTGAGATTTATTTTCCAATATTCCTTTGCTCTAACCTAGGGGTCATGACAGCACCATTTA chr4 - 94230402 23777540 23777539 23777696 70452707 70452706 70452863 157 CCTTTCTCATAACAGGTTGCTGAATGCAATAAAGCCAGGATTGGTCAAAAAGATCAATAGACTACCAACCCCCATTGCAGGTTTGGTGAGTATATCAAATGGAGAAAAATCTTTCCCTGCTGCTTTTTGC--ACTTTGGTTTTGTGACTGTGTGATTTA .....:....:................x............:.x..:...............:.:..x..............x:.........::.x:...x....xxx..:..:.xx.::.x....x:x.--..:.x..xx.::....x.:::x..... 130M2D27M 117/157 74.5% 157/94230402 0.0% 2/157 1.3% 17746854 NA +3130 chr4 + 190214555 41581797 41581796 41581853 57 CTCTGTCTCA----AAAAAAAAAAAAAAAAAAAAAAAACAACAGCAAAACTCCACAAGTGA chr4 - 94230402 21325736 21325735 21325796 72904607 72904606 72904667 61 CTCTATTTTAGCTTAAAAGAAAAAAAAAAAAAAAAGAACATCTGCAAAAATCTACAAATAA ....:.:.:.----....:................:....x.x......x..:....:.:. 10M4I47M 46/57 80.7% 61/94230402 0.0% 4/57 7.0% 20256061 NA +3077 chr4 + 190214555 41591203 41591202 41591266 64 TTCTTTTCTCATTCTCTTTTTTCTTTTTCTTTCTTTCTTTCTTGCTTGCTTGCTTGCTTGCCAA chr4 - 94230402 54577909 54577908 54577972 39652431 39652430 39652494 64 TTCTTCTCATAGTCTAATTTTTCACTGTGAATCTTTCTTTCTTGCTTGCTTTCTTGCTTTCAAA .....:..x:.x...xx......x:.x.xxx....................x.......x.x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -12986706 -81243696 +3007 chr4 + 190214555 41598491 41598490 41598546 56 TTAAGAAGAAAAACTTGCTAAAGATGAAAAACCTTTTTAAAAAAAAAAGAAAGAAA chr4 - 94230402 93972821 93972820 93972876 257527 257526 257582 56 TTCAAAGGAAACAGTTGCCAGAAATGGTAACTCTCTTTAAAAAAAAAAAAAAGAAA ..x.:.:....x.x....:.:.:...:x..x:..:.............:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -52374330 -41856072 +8946 chr4 + 190214555 41598849 41598848 41599051 203 AACTTGGGAGGGGCTGGTTCATAAAGATAATCT---------AAGATAATATAGACTTATATTTCTTTTT--------TTCCTTCTAGGACAATATTATCTTATTCTTGAGAGGTTGTAAAGAGCTCGGCCTTAAAGAATCTCAACTTTTTGACCCGAGTGACCTCCAGGATACATCCAACAGAGTAACAGTCAAGTAAGTAAAGC-GTGATTTATGTTTA chr4 - 94230402 23801604 23801603 23801824 70428579 70428578 70428799 221 AATTAGGGAGATGCTGGCTTAATAAAATGACCTTTGCAACTGAAGAAAAGTTAAAACTATTTTTTTGTGTGTGTGTGTCTCATTTCAGGATAATATCATCTTATTCTTAAGAGGCTGCAAGGAGCTGGGACTTAAGGAATCTCAGCTGTTCGATCCTGGTGACCTGCAGGACACCTCAAACAGAGTAACCGTCAAGTAAGTACAACAGCAGTTTGTGATTA ..:.x.....:x.....:.:.xx..:..:.:..---------....x..xx..:.x:...x...:.x.x.--------:..x..::....:.....:...........:.....:..:..:.....x..x.....:........:..x..:..:..x:.......x.....:..x..x...........x............x.:.-.:::...:..x... 33M9I28M8I128M1I14M 151/203 74.4% 221/94230402 0.0% 18/203 8.9% 17797245 NA +3605 chr4 + 190214555 41603829 41603828 41603939 111 GAATCTGCTATTCTGACAATATTTTCTTTTCCCTTTCCTTG------------------------ACTAGGAGCCTTGATTATAGTAGGAAGCTGAAAAATGTAAGTGTTTTA--------ACTTCCAAACTTGTATCTTTGA chr4 - 94230402 23804576 23804575 23804713 70425690 70425689 70425827 138 GGGTCTGC-ATTCTAAT----TTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTGCAACCAGGAACGTTGACTGTAGTAGGAAGCTGAAAAATGTAAGTATGTGACTTGGAGTATTTTTTATCTGGTATATTTGA .::.....-.....:.:----....:.....::...::...------------------------..:....:.x....:.:.........................:.x.x.--------.:..::x.x..x....x..... 8M1D8M4D20M24I48M8I22M 82/106 77.4% 138/94230402 0.0% 37/106 34.9% 17799253 NA +8891 chr4 + 190214555 41605886 41605885 41606021 136 TTCCACAGGTATTAGTTACCATTTACTGGCTGGGAAAAGCAGCAAACAGCTGCACATCCTACAGCGGAACGACACTAAACCTGAAGGAGTTTGAAGGATTGTTGGCTCAGATGCGAAAGGTAACTTGGCTTTTCTT chr4 - 94230402 23807597 23807596 23807732 70422671 70422670 70422806 136 TTCTGCAGGTATTAGTCACCATTTATTGGCTAGGAAAAGCAGCAAACAGCTGCACATCATATAGTGGATCAACCCTGAACCTGAAGGAGTTTGAAGGTTTACTGGCACAAATGAGAAAGGTATCTATCTTTTTGTT ...::...........:........:.....:..........................x..:..:...x.:..x..:....................x..::....x..:...x........x..xxx:....x.. 136M 112/136 82.4% 136/94230402 0.0% 0/136 0.0% 17798289 NA +4796 chr4 + 190214555 41610458 41610457 41610721 264 AGTTGTGTCCTTAGCTACATTTATAAATGTTTTATGATTTGTATATA-TTGAAATT--------TACCCATTTGAGAGAATAAATTGTAGTAATTATAAC-------TATAGCTGACACTTTTAGAGTACTTGTTCTGTAACAGGCATTTTTCTGAATACTTTCCATATATGAACACATTTAACCCTCCCAGCAACTCTGTGAGACAGGCG-TTATTATTAGTCCCATTTTACAGATGAGAAAACTGAGGTCTGGAGAAATGAAATAACTTGCCTGAGGTC chr4 - 94230402 10728999 10728998 10729262 83501141 83501140 83501404 264 AGTTGTGTACCTGTTTTGGATTATGGatatttttaaatttatatataattGTGGTTGGTTTCAGTACTCTTTAAATAACAACAATCATTATAAGTAAAATAAAGAAGCAAGACTACTAATATTAT-GTACTCACTCTGAAGA--------TCCTGAATAA-------ACAGGAATTGATTTAGCC-TCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ........x.:.:x:.xx:x....::..:....xx:....:......-...x::..--------...:.x..x:.x.:x.xx...::.x:...x..x..:-------:.x::..:x:.x.x...x-.....:::....x.:x--------.:.......x-------.:.x...:xx.....:..-..x..::.x.:.......::...::-...:...:..::...........:..:...........:x::x.x.::.x..:...:.....::::... 47M1I8M8I36M7I18M1D16M8D10M7D18M1D25M1I69M 158/247 64.0% 264/94230402 0.0% 34/247 13.8% 30881459 NA +42537 chr4 + 190214555 41612408 41612407 41614112 1705 CATTCCAGTCTTTGCGGATGAGAACATGCCTCTCTGCCAGTGTTATCCACAGTCCTAATTTTAAGCGACAGTCTGG---ATGATATTAAATTGAGGTTTATCTTTGAGTGACCAGAGTTATTTTTGTTTTAGTCAGCCTGGACTATTGTAATTAATGCTAAGACACTGGCGGGAACAAGGCTTTTATTATAATACGAGGGTGAGGATGGCTTTGACTGACCTTT--CTTCTGCTGGAGTTTCAGTGTTTTAGTATGTGCTGCTTGTGCTGGAAAGAATTTATAATCACAGG-CTGTCAAAGACAGCCATTGTTCTCCCTGCTCTGAACATGTGGGTCAGCCACAAGTGCTTTCAGCTCCCCCAGCGCCAAGAGCTGGCTGAGAGCGA-GAGCATGCCTGGATTCTTCTGAGGCATCAGGAAAAGCGTTTTGCATATTTTTCATTGCCTTTCTTTTTTTTTTTTTTTTTTTAACTTTTGCCTCAGAAAGACAGCTCCCTTTCAGAGCAGGAATTTCCCTTCAAGGTAGCAGGAGATGAACGCGTGCTGCTCCAGGATTTTACAGAACTGATTCTGCAGCAAAGACAAATGTTGCCTG------TATTTGCCAGATAGTATAAACAGGAGCAAAAG-------------TTGCACAGC--------TAAACCAGG----GGCTCATTCCCAGGACAGACATGCA---------GTTATGGATTCCGAAAGACAAGTCAAGGTTAAGGTTTTGGTTTTTCGTTTTTGTTTTGAACTATCATTGTACTGTTGTGAATCCAAACTTTGTGATCCTTTCTTCTAATTCTTTCTCTACTCTTTTTTTTTTAAACCTAGG-GAATATGAGTTATTTGGGGATTTTTTTAAAAAAAACGTTG-------TGCATGATT----TTCTGATTGGGAAAGTTGCAGCAAAGGAGGCTCCAGGAACAGAGCAGTGACTTTTCAAAGATGATTGATCCTGTAACTGGTTTCCACAACCTT------TCCATTCTGATGTGATATGCAGGGGTTTT--TTTGGAGACCACTGGAGACCCATCTTCCTGATAGTGTAGGCTAGAATTATGT-CTGTAACCCTTTCATTTTCTTTTTTGACAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAGTGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGCGATGGTAGG---TTGGAGTCTTAATAAACTATCCATCTTGAAATTAAACAT---TTGCAGGGGCT--GCATTGCGCCTGGCAGAGGGATGGGCACTGGGAAAGCAGGCTCCATATCCACCTTGCCGGAACTTAGTAATTCTATAAACTGGCAGAAAAAAGAAGTCTTTGAATGTTGTTTTTCATGGTCCTTAGAATTTTGGTTGGCTTTGCCAGGAGTTTATTTGAGCACTGCCTCAGTGAGCATATCTTC-TGTTGGAAAATGTGTTACATCATT----------------------------CCTCCCTTGGACTCAGTGAATCAAGACACTGTGCAGACCA---TTAGCTCATAAAGTGTGCTGGAGGTTTATATACTCTGGGCATGAGGAAGCTAAATGTTTGAGTGAGTACCACACTATATAAGAGAAAATGGATCAACTTCCAGTAAACTGGAAATGAACTGCACACA-CTTAGAAAGTTCTGAAGCCTG chr4 - 94230402 23811161 23811160 23812771 70417632 70417631 70419242 1611 CATTCCAACCTCTTTGGGTCACAAAATGTCAGTCTGATAATGGCACCCACATTTTTGACTTTACTT-ACTGTCGAGGGAAAAAAAAAAAAAACAGGTTTATCTTTGAATAA---AAGTTATTTTTGTTTTTCTCCGCCTGTGCTATTGTAATTAATGTTAAGACACTCTCTAAAACAAGGGATTTATTATAATACAGGGGTGAGGATGGCTTCTATTGACCTTTTCCCTCTGCTGGAGTTTCAGTGTTTTAGTATGTGCTGCTTGCACTGGAAAGAATTTATAATCACAGGGTTGTCAAAGACAACCATTGTTCTCACTGCTCTGAACATGTGGGTCAGCTACAAGCGCTTTCATATCCCCCAGAGCCAGGAGCTGGCAAAGAGTAAAGAGCACAACTGAATTCTTCTGAGGCATCAGGAAAAGCATTTTGCATATTTTTCATTGC-----------------------TGA---TTGCTTCAGAAAGACATCCCTCTTTCATAACAGGAATTTCTCTTCAAGGTAGAGGGAGGCTGGGGCACACTGCTTCATTATTTTGCTGAGCTGAAGCAGCAGCAA---CAAATGCTGTCTGCTGGTGTCCCAGCCAGATACAATAGATAGG--CAAGGGGAGGGGGAATCCTTTGCAAAGCAGCAGACTTAAACCTGATGCAGGCGTGATGTTAGAATTGTAGTGCTTTTGTTGCTGCTATGGACTATGAACGACAAGTCACATTTCAGGTT---------CCTCTTGGTTTTGA----TCACTTTATT------------AACTTGGT-------TGTTGCAACTTTTTCACAGCT--------TACAGATCTAATCTAATAAGCGTACTTTG---CTCTTAATCAGCATAAAATTGGGTTTATTGCAAGCTTGCACTTTTGTTTTGAAGGGG------AGAGGGGGC---AGAAAGCAAGGAAATCTTTTTCAGGGG-------------AAGAGGTTTTTAGTACTTTGGAAGATGCTGCGTTACGTGATGTGTAATGAATCTCATTGGTATGTCAGTGG-----CTTCTTTCTGA-----------AGAGGTACCTACTGTA----CTTCATGT-----------AGGAAACAGAGGATATCGAGAGCCCAAAGCGCAGCATTCGGGACAGCGGCTACATAGACTGCTGGGACTCGGAGCGCAGTGATTCCCTCTCCCCCCCGCGCCACGGCAGAGATGATTCCTTTGACAGTCTGGACTCCTTTGGCTCCCGCTCGCAGCAGACACCGTCCCCAGATGTAGTGCTCAGGGGAAGCAGTGATGGTGAGTACTTGTCGCCACGAGGCACGCGTTGTCTCTGGAGTAAACGTGCCTTTCAGAAGCTGGGCACAGCGTCTG---------------------AATCGTGCT-------AATCCTGCAGGAGCTCTTCA---CTGTGAATTG-----------------CTGA---------TTTGTGCTCCCC-GAGGTTCAGATGACTTTGCCAACGGCTAACTTGAAGTCTGTCTCAGTTTGGATAGCACAGTTTTGGAAAATCAGTTACATCATTGCAGTGTAATTTTATTATTGGGATAGTGCTTTTCTGGGTTATGGTGTAAGAGGATGTTATGCAGACTCATTTTAACTTTTAAGCTAGGCTGGAGCAAGAAATAA-AAGTGCAGGAACAGGGGAAATATTGAAGCGAATAAAATGTTGCCTAA----------ATAAACCCTAGACAGAT---AAATGACCTAGAAATATCTTGGAAATGTCTGATACTTG .......::..:.x:..:.x.x..x...:.xx....x:.:..x:.:.....x.::.:.:....xx:-..x...x:.---.x:.x.xx...xxx..............:.:.---:...............xx..x.....x:...............:.........xx.x::.......xx.............::...............:x.:........--.:.....................................::........................-:...........:...........x.......................:.....:.......xx........x....:........x:....::.-.....::x...:.........................:....................-----------------------.:.---....:...........x.:.:......x.:..........:...........x:....::x::x..:::.....:..xx.....:.x..:....xx.x.......---......:..:...------.x::x........xx...:.:...--...::.-------------.....x...--------......x.:----...x::x.x::..:.:x.xx:...x---------.:......:.x:...x.........x:x..x.....---------.x.:..x.......----...:.x..:.------------.....x..-------.x..x:..:.:....x.x:..--------.x:.:.:...:x-x....x.x..xx....---x.:..xx.x.:x.x..x:...-------....x.x..----..:..x..x.:.::.x------.:...:...---..:..xx:..x.:xxx:......::.:-------------..xx.....::.xx..:..------.x.xx:x.x.:.....:..:.:x.:x.:.--..x.x.x::..x...-----.x....:....-----------...:x..:x.-.....----:.....x.-----------....x..x..x..:..:..:..:..x..:.....:..:..:.....:........x...........:..x........:..:........:..:..x.......................:.....:.....:...........:.....x.:......:..x..x...........x..............:......::.---...xx.:.x::.x:x..xxx:::...:x::.x.....:.---..x...::...--...:x...:...---------------------..x.:x...-------x.:.:...x...:..:xx:.---..:.:..:..-----------------:...---------..::..x...::-..:x..::.x..:........:x:.:.x.:....:xx...:......xx.x...x.x:x-.x.........xx...........----------------------------.:.::..x..x:x::...x.xx.:..:::.:.......:x---...:..:x...:x.:x.......xxxx.x...x-xx.x...x..:x.:.xx....:..x:..:..:..xx.:::.::x...----------..x...:::x:::.:.:---......x..:x.x.:.-...:....xx.....x:.:.. 66M1D9M3I32M3D110M2I65M1I95M1I58M23D3M3D105M3D13M6I24M2D6M13I9M8I9M4I25M9I36M9D14M4D10M12D8M7D21M8D12M1I16M3D21M7I9M4I16M6D9M3D27M13D19M6I29M2I15M5D11M11D10M1I5M4D8M11D203M3I39M3I11M2I12M21D9M7D20M3D10M17D4M9D12M1D59M1I24M28I40M3I33M1D47M10D17M3D16M1I21M 1079/1502 71.8% 1611/94230402 0.0% 312/1502 20.8% 17801247 NA +16046 chr4 + 190214555 41619175 41619174 41619483 309 CTCTCTTCCCTAGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATCAGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACCGCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGGTAAGGCCTGAGCACCGCTGCCCTCTTCCTGGCTTGGGCATGA chr4 - 94230402 23816643 23816642 23816946 70413457 70413456 70413760 304 CCTTCCTCACTAGGGAGAGGAAGTGACTCAGAAACTGACCTGCCACACAGAAAGATGCCAGATGTGAAAAAAGATGATATGTTGGCGAGGCGGACCTCACACGGTGAACCTAAATCAGCTGTGCCTTTTAACCAGTACCTCCCAAACAAGAGCAATCAGACTTTCTATGTACCTGCTCCACTTCGGAAAAAGAAAGCTGAACGAGAAGAGTATCGAAAGAGCTGGAGCACTGCGACTTCACCGCTG---GGAGACAGACCTTTCAGGTAAGACT--GGCATGTTCAACTTCTCCCTTCCGTGGTGATGA .::..:..x..............:.....x...x.:...:....x..:x.:...x.............:..:.....:....:x..:x.......:..x..:.....:..x........x.......................:.....:...........xx:...:..x..:..x..x..xx.:..:........x..:x....:..:..:..x...........:..:..x..:..x......---..:..x..:..:..........:.:--:...:xx:::x.:...:...xx.x...xx.... 246M3D25M2D33M 230/304 75.7% 304/94230402 0.0% 5/304 1.6% 17802532 NA +6888 chr4 + 190214555 41620409 41620408 41620709 301 TGTCCAACTCACTAGCTTTCCTGAAACGATAGAGGAAGAGGGGAGTGAAG--TGGGGTCTGCTGGTGAAGACAACCCAGCTGGCCAAATGAATCCTGGTTGGAAGCCTTCCGATGGTGGGTGTGAATT-------ACCTGACGGCAGTGGTAAGGAGCACCCTTCTTCAGACGGGGCTGTGGTGGCACCAGCTCCCAAGTCTGAAGAAAAAGATGCTGCTGAGATCCAAAAGCGCAAAAGGCTAGAGCAAGCTGGAATCAAGGTCATGCCAGCAGCACAGCGCTTTGCCAGGTCAGCTCTGGGCTGAGGG chr4 - 94230402 23817569 23817568 23817869 70412534 70412533 70412834 301 TGTATAATTCATTAGCAAACCTGAAACCATAGAAGAAGAACAAAGTGAAACATCAGGACTGT--GTGAAAAGGAGAAAATGGGCTCCATGGCTCCTGAG-GAAAGCCCTGTTAAAATACAAGCAGATTTAAATCAAAATGAAGGAGATTCCATAGACCAGTCTCCTTCATGTAGTGTAAAAGAAACATCATCACTCAAG------GGAAAAGATGAAGCAGAGATCAGAAAGTTAAGAAGACTTGAACAAGCTGGCATTAAGGTCATGTCAGCTGCCCAGCGCTATGGCAGGTTAGCCCAGCAGTGTGGG ...x:..:...:....xxx........x.....:.....:x::......:--.x:..x...:--.....:.x:.xxx.::x...:xx...:x.....:x-.:.....:.x:x.x::.:x:x.:::...-------.xx...x..x::.xx:.x:..x..x:..:.....x:::.x.:x:x:.x::..:..x.x.:....------.:........xx..x......x:....:xx.:...:..x..:........x..:.........:....x..x.......x..x.....:...:.x.x:x..x... 50M2I10M2D35M1D28M7I64M6D105M 184/292 63.0% 301/94230402 0.0% 18/292 6.2% 17802840 NA +9676 chr4 + 190214555 41631127 41631126 41631483 357 CTTATTTCTGGTTTTGACTAGGGATGGAGATGTTCAGCACATCTGTGCTTCTGAGCCTTCCCCAGAAATTAAAGCAGAAACTGCCATTCGTGATGACTTTGCCAACCGCAAAGCAAGGGCCTCTAAGAAAGCTTCCAGCCCCAGGCAAAAGTTTGTGCACTTTGGGCCAGTGACGGAGCTAGATCAGCAGAAATGGAAGCGGCTTAGCATTGGCAAGGCTGGGCCTAGAGAGGATGAAGAAGAAGTCATCTGTCATGGCAGC---AAGATTCAAATGGACTCTGTGTCTCCTGTCTCAGC-------GGCCACTTCCAGCTTAAAGGGCC-----ACCAAATATTTAATCGACAAAATGACTGCAGGTATTT chr4 - 94230402 23826723 23826722 23827094 70403309 70403308 70403680 372 CTTATTCCTCATTCTGACTAGTGAAGAAGATTGCAAGTGTCCCAGTGACACTCTACCAGCAGCTGAAGTCACAGTGCAAGCAGCAGTCCAGGATGATTTTGCTGTCCGCAAAGCCAGAGCAAACAGAAAGGCTGGTAGCCTCAAGCAGAAGTTTGTGCATTTTGGGCCAGTAACTGAGATTGATCAGCAGAAGTGGGACAAGCTCAGCATCGGCAGAGCTTCACGCAGGTGTGAAGCAGAAGAGGAAAGCGGGAAAGACGGAGTGAAGGTTCACTCGGATGTTGAAAGCTCTCTTCCAACCACTGCTGGCAGTCTCCAGTTTGCTGAGCATGGTGATGCAGTATCTAAGCCACAGAATGAGCCCAGGTATTT ......:..x:..:.......x..x.:....xx:x..:::x:.x...x:x..xx:..xx.xx.x...:.:.x..::x..:.x..x:.:.:x.....:.....::x.........x..:..xxx:.::..:...xx:....:..:...:...........:...........:..x...x.x...........:...:.xx:...:.....:....::...xx:.x:..:x:x..x.x......:.xx.x.x.xx.x.:.:.x---...:....xx:...:x:..x:xx::..x.::..:.-------...x:::.....:..:xx.:..x-----.:xx.:...:...x.x...:.....x:x......... 262M3I35M7I23M5I37M 223/357 62.5% 372/94230402 0.0% 15/357 4.2% 17804404 NA +5792 chr4 + 190214555 41633478 41633477 41633817 340 TGAGTGACACTACTGAAAATATCTTTAGCAGTAAGTGGCCTTTGACTGGCTGGAC---TGAATGTTGCCCTAGGGTGTGTCCTCTGGCCTCTGAGTGTGAGGCTTCAGGGACAGAAGAGAAGTTGGAGAAGATGACAGCTCCTGCCTGGAGTGGCAGTGGACTGAAAGGCCAGCGAAAGTTGGATGATTCACGAAAAGATGACATGATGGCCAGGAGAACTGGGATGTCCCTTAGACACACTGGATCCAACCCAAACCAGTTCCTTCCAGTTCCATTTGCAAAGCAACAGGATGTGGAAGAATCTTCTAAAGGTCTACCCATGAAAGATCAGAGGTCAGAAAG chr4 - 94230402 23828535 23828534 23828874 70401529 70401528 70401868 340 TGAGTAGCAGTACCCCACGTTGCCTCAACAGCCACTTGCCTTTG---GGCTATACAAGTGAACGTTATCATGGAACAGTGTCACTTGTTTCTCTGAGCAGTACTGTAACGCGAGAAGAGAGCCAGGAACAGCTTGAAATCCCTCATCAGCAGAGTGGCGGAACAGAAAACAAAGTGAAGTTTCCAGACCCACAAAGAGATGACATGTTGGCCAGAAGAACAGGAGCTTTTCTAAAACAGCCGGGGCCAAGTGTTAAGCAGTTCCTTCCCATGCCATATTCAAAGCAGCAGAATAAACAGGGCACAAGTAGAGAACTTGAAAAGAAAACTGCAAGGTAAGAAAG .....::..x...:xx.x:.xx.:.:.:...:x.x.x.......---....:x..---....:...::.x.:.::::xxx:.x..x.::...xx.x.:::x:..x:.:x.xx........:x:x...:x..x.x:x.:::...xx:::.x:x:.::.:...x:::..::.x.:xx:.....xxxx..::...:..:..........x.......:.....x..:::x.::..x.:...xx.x..::.x.::x:x..x...........x:.x....x.x.......:...:..:x:x.:.:xx.xxx..:..:x..xxxx.x....:x.xx:....x...... 44M3D8M3I285M 188/337 55.8% 340/94230402 0.0% 6/337 1.8% 17804943 NA +3018 chr4 + 190214555 41636338 41636337 41636381 44 TACTTTTTTTTTTTTTTTTTTTTGCTAACTTGCCTTTACTTTTT chr4 - 94230402 31668160 31668159 31668203 62562200 62562199 62562243 44 TATCTTTTTTTTTTTTTTTTTTTGCTAAGTTACCTGTACTCCTT ..::........................x..:...x....::.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 9968178 NA +9556 chr4 + 190214555 41638896 41638895 41639206 311 TCTGCCAGTCCTCTAATTTTTTATTTGATCTTATAGATACGGTCCGAGAACTCCTGTGTCTGATGACGCAGAGTAAGTTGCCTTGTATTTGTAGGATTACATTAATTACTAGCCTAAACTGCATGCTT-CCAGTACTTACCACTAA-TTGAAATGCAACTGATGC-----AAGTGAACTGAATAGTT-----AGCTGACTTGTGCAGCAAAGCACTTGAAGTTGGAATGCAG---AGCATACATTCTGTGCAGGAAAGATGAAT---GAAAAAGCAACT---------TAAGCATGATTCTAATATGAAGCTGCTGCTTGAAACTTAACATTTGCTTT chr4 - 94230402 23830820 23830819 23831151 70399252 70399251 70399583 332 TTTATCAACGCTCTAATTTTATATTTGGTCTTGTAGATTCGGCCCCAGAACTGCTGTGTCTGATGACGCAGAGTAAGTTGTCTTGTGTTCACAAGATTCTGTT-TTAAACAACTTACACTGCATGCTTGCCAGT-CTTTCTACTAATTTAAAATGCAGTTGATGCCTCATAATTATTTTGCAGTGTTTCAGCAAATAAATTTTTCAGAAATGTACTGAAAAATGGAATGCAACATGGCTTACAT----TGCAGCTAAAAATAATTTATACATAGAAACTCATAAAAACTGAGCATAACACTAATTTGCAGCTATTGCTTAAAGCATTAttcttttttt .:.::..::x..........x......:....:.....x...:..x......x...........................:.....:..:::.:....x::..-x.x.x:.:.:..x...........-.....-...x.:.....-..:.......::......-----..x.:xx:..x.xx...-----.:x.:.x..x.x...x..x.:...x:..:x.........:---:..x.....----.....xx..:.xx...---x.x.x..x....---------.:.....:.:x.....x..x....::.....:..:.x.x.:x:..x:... 103M1D24M1I5M1D11M1I18M5I17M5I40M3I9M4D16M3I12M9I50M 221/305 72.5% 332/94230402 0.0% 33/305 10.8% 17808076 NA +7911 chr4 + 190214555 41644464 41644463 41644632 169 CGCGGTCCCTCTTGTGTTCGCTCTCTCCACACTCAGGAGCACCAGCATGTTTGACATGCGGTGTGAGGAGGAGGCCGCGGTGCAGCCGCACAGCAGGGCCCGCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAATGGCAAGATGTGAGT chr4 - 94230402 23835997 23835996 23836162 70394241 70394240 70394406 166 CACTGTGCTTCTTAT---TATTCCCTCATTGTTTAGGAGCGTGAGCATGTTTGACATGAGGAGTGAGGAAGAAGCCATGGCTCAGCCTCACAGCAAAGCTCGCCATGAAAAGCTGCAGAATATACACAACCAGCTGAAAGAGGACGAGACCAGGTGGCAAGATGTGAGT .:.x..x.:....:.---:::..:...xx:::.:......::x...............x..x.......:..:...::..:x.....x.......::..:.....x..:x........xxx...x.:..........::..:..x..x:x..::............... 15M3D151M 119/166 71.7% 166/94230402 0.0% 3/166 1.8% 17808467 NA +31623 chr4 + 190214555 41646106 41646105 41646905 800 CTTTCTTTCCCTGCCAGGACCTGGCTCGTTGGAAGAGTCGTAGAAGAAGTGTTTCTCAGGACTTAATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGAAGTTACTGGCTGGAGAAGATGGGACAAGTGAACGAAGGAAAAGCATCAAAACCTACAGAGAAATTGTTCAAGAAAAGTGAGTTCTTTCTGTTGTCGTTTTTAATGTACAATATTATCTAGGTGTTTTTTTTTTCTAAAAAT--TATTGGCTGTCACAAAGGTTC--TGATAGTAACATTTTATATTCCCTGTACTATCTCTTCAGTGCTACCTT-------------------CGTTTCTACCAAGGTCTTCTTTGCAATTTTCAT-TAGTTGACTTTGTTATTGCTTCTCCCATGTCCTTTAGAGAGCGGAGAGAGAGAGAGCTGCATGAAGCATATAAGAACGCTCGGTCCCAGGAGGAGGCAGAGGGGATCCTTCAACAGTACATTGAGAGGTTCACCATCAGTGAGGCTGTTCTCGAACGCTTGGAGATGCCAAAAATTCTGGAAAGAAGCCATTCAACAGAGCCAAATTTATCCTCCTTCCTGAATGACCCCAATCCCATGAAATACCTGCGGCAACAGTCACTGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTGCCAGTGTTCTGGATACCAGCATGTCAGCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCTATGCTGACACCCAAGCCTTACTCCCAGCCCAAAAATTCTCAAGATGTTCTGAAGACCTTTAAGGTAGGACAAGTT chr4 - 94230402 23838929 23838928 23839698 70390705 70390704 70391474 770 CCTTCTTTCTCTCGCAGGACCTGGCTCGGTGGAAGAGTCGTCGAAGGAGTGCTTCCCAGGATTTAATTAAAAAAGAAGCTGAGAGAAAGAAAATGGAAAGATTATTGTCTGGAGAGG---GAACAAATGAGCGCAGAAAAAGCATCAAAACCTACCGAGAAATTGTGGAAGAGAAGTATGTTTTCT----------TACTGAAGTGCAG--------AGGCATGT-------CTGAAAATGCTGTGTGCT-TCACGGGGGATAGGTGGTTGTGA------ACAGTC--------ATGTCTGCAGGGCTGGAGTAAGAGAAGGAGAAGGATAGTGATGGAGCAGAGGAAGTAATGTGAATTTTAATGTGATGGTCTCTCTTATGTCATCTCCTGTGC-----AGAGAGAGAAGAGAACGGGAGCTTCATGAGGCATACAAGAATGCAAAGACCCAGGAGGAGGCTGAGAGCATACTCCAGCAGTACATCGAAAGATTCACCATTAGCGAAGCTGTCCTTGAGCGTTTGCAGATGCCAAAAATCCTGGAAAGAAGCCATTCAGTGGAGCCAAATT------CCCCACTGAAAGACCCGAATCCTCTGAGATACTTAAGGCAACAATCACTGCCTGCTCCAAAATTCACTGCCACCATTGAAGCAACCATTGTTCCCACCACTGAATTAGAGCCCAGTGGTTCGACAGGCCGCACATCTCCCAGCAAAAGTGTTGTCTCCAAGGCTGTGCCTATGCTGACACCCAAGCCTTACTCTCAACCCAAAAATACACAGGAAGTTTTAAAGAACTTTAAGGTAAGATATATT .:.......:..xx..............x............x....:....:...:.....:.....:..:.....:.xx..:..:..:........:.::...:..x.......:.---.:....:...:..x..:..................x..........xx....:....:x...:.:.----------.x:.:.x..:..:--------...::.x.-------..:.....--.:.xx...-....:::..x.x--..:.x..:.------.:.x..--------..x...x...x...:xxx.-------------------:.x.xxx:.x:...xxx.xx.xxx......x..-.::.x.x..:.x....xx.x.....::..:-----......x.:.....:x.:.....x.....:.....:.....:..xx:.x.............x...:.x..x..:..:........:..:..:........:..:..:.....:..:..:..:...x.............:..................:::..........------..::x.....x.....x.....:x...:....:.:x.......:.........x.x..x..............::.....:.x.......:..x::...x..xx:.:..xx....::xx..::.....x.::x:.....x.......x...:::::....:..x.............................:..:.........x.x..:..x...:.:....x..........:..:.x:.. 117M3D66M10D13M8D8M7D8M2I8M1D12M2I9M6D6M8D19M19I33M1I30M5D172M6D245M 553/746 74.1% 770/94230402 0.0% 78/746 10.5% 17807177 NA +4655 chr4 + 190214555 41670716 41670715 41670927 212 AGAGTCGCCTGGCACTGCCAGTGTTCCGCTTAGAGTTCAGAACTCTTGGCGACGATCCCAGTTTTTCTCCCAGTCAGGTAAACTGCATACT--------GGGTAGCTGTA---------TTTCTTTTGTGCGAAAATCCATG----TTGGGGCGATCAATGATGTGT-------GGCACTTGTCTTCATTTCTGATTTCTGGGGAAAAAATTATTTCTTATGCACAGTTAGCAAAGAGCT chr4 - 94230402 23854744 23854743 23854982 70375421 70375420 70375659 239 AGAGCCACCCCGCAGGGTCATGGTTCCGCTCAGGGTGCGGAACGACTGGCGGCGCTCCCGGTTTTTCTCACAGCCAGGTAAA-TGCGACTTGAAGGGAAGAGCAGCCTCACACCTCCACTGCCTCCAGTGCGAGGCATCCTGAGCCGTGGGGTGGGCGAGAGCCGGCAGTCACGGGAACTCGTCCTACCTCTCGCCTTCGTAGAAAACGTCTATTCCTGTTGCGCAGTTGACAAAGAGCT ....:.:..:x...xx.:..xx........:..:..x.:....xx:.....:..x....:.........x...:........-...:xx:.--------.:.:...:x:.---------.x:..::x......::xx:.x..----x.....:.:x.:.x:::xx.:-------..x...:...:.xx:.:::.x:...xx:.:...x:x:....:..xx...:.....::......... 82M1D8M8I11M9I23M4I21M7I66M 133/211 63.0% 239/94230402 0.0% 29/211 13.7% 17815972 NA +7277 chr4 + 190214555 41680002 41680001 41680108 107 ACAGGAGAGATACCAGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCCCAAAAGGAGGTGGAAGAGGAAGAACGCAGATACTATGAGGAGGTAGGAAATT chr4 - 94230402 23858005 23858004 23858111 70372292 70372291 70372398 107 ACAGGAGAAGTATCAGAAGGAGCAAGACAAACTGAAGGAGGAATGGGAAAAGGCACAGAGAGAAGTTGAAGAGGAGGAGCGTAGATACTATGAGGAGGTATAAAGCT ........::..:...........:.....:.....:..:..:...........x..:.::..:..x........:..:..:..................x:..::. 107M 86/107 80.4% 107/94230402 0.0% 0/107 0.0% 17821997 NA +7481 chr4 + 190214555 41680826 41680825 41681064 239 ACTTTTTAAAAT---------GCCCTGCTTGTTCG------AACATATTCTGATTTTTTTCTAAAGTGCCTTAATGACATTTTTGTCTTGACAAATATGATTTTTATTTTCCCCCCTTTCATCGATTCCTGTCCTTCCCCTTAGGAGCGTAAGATAATTGAAGACACTGTGGTTCCATTTACTGTTTCTTCAAGTTCCGCTGACCAGCTGTCTACCTCTTCCTCCATGACTGAAGGCAGTGGGACAATGGTGAG chr4 - 94230402 23858975 23858974 23859200 70371203 70371202 70371428 226 ACTTTTTAGCATATAGGTGACGTTCTGCTTGTTTGTTGTTGGACtttttttttttttttttt----tgc----------ttgttgtttt-----------tttttAAGTCTTTCTCTCTCCTGGTTCTCTGTTTTTC---TTAGGAACGTAAGATAATCGAGGACACTGTAGTTCCATTCATTGTTTCTTCAAACTCTGCAGAACTCCTCTCCTCTTCTTCCTCTACCACTGAAGGAAATAAAACAGCGGTGAG ........:x..---------.::.........:.------:..x.x..:.xx.......:.----...----------..x....:..-----------......xx.::::.:..:..x.x.x.::....::...---......:...........:..:........:........:.:...........::..:..x..x.xx..x..:x.:........:.:x........x.:.:::...::...... 12M9I14M6I21M4D3M10D10M11D37M3D114M 155/211 73.5% 226/94230402 0.0% 43/211 20.4% 17821851 NA +4834 chr4 + 190214555 41687798 41687797 41687949 152 TCTTTGCTTGTCATAAT---TTTTGACTCCTTTACCACATTACAGGAAAAGTCCCCGAGAGCACTTCCAGGCTGGGCCTTTCTCTCCCTGTTCTCCCACCCCTCCCGGTCAGTCACCAAACAGGTACAAGAGGTCAGCAGGCCTTTCTG-AGGCTG chr4 - 94230402 23863875 23863874 23864025 70366378 70366377 70366528 151 TTCTTAGTTGTAGCAATGCATTTTCTCTCCTTTGC-----TTTAGGGCAGGCTGTCATGAGAACTTTCGATCTGGGCCATCGTCTCCCTGCTCACCTGCTGCACCAAGTCAGTCACCCAACAGGTACAAAAGGTCAATAAGGAATTCTGCAGACTG .::..:x....x::...---....xx.......:.-----.x:...:x.:.::x:.:x...x....:.::x.......x.:x........:..x..::.:x.x..x:..........x...........:......::.:.xxx.....-..:... 17M3I15M5D109M1I6M 100/147 68.0% 151/94230402 0.0% 9/147 6.1% 17823923 NA +8312 chr4 + 190214555 41689494 41689493 41689649 156 AGTTTTTATTCTTATGTATATTTTTAAA-------------CCTAGGTCTATAAGTGGAAAGAAGCTGTGCTCTTCCTGTGGGCTTCCTTTGGGTAAAGGAGCTGCAATGATCATCGAGACCCTCAATCTCTATTTTCACATCCAGTGTTTCAGGGTACGTA-CTTACTG chr4 - 94230402 23866355 23866354 23866519 70363884 70363883 70364048 165 AGTTTCTGTTCTTTT-----TTCTTAAAGCAATGTTTGTCTCCTAGGTCTGTCAGCGGAAAGAAGCTTTGTTCCACCTGTGGGCTTCCTCTTGGCAAGGGAGCTGCCATGATTATTGAAACGCTTGGTCTTTATTTCCATATTCAGTGTTTCAGGGTACGTCTCTTACTG .....:.:.....x.-----..:.....-------------.........:.x..:...........x..:..:x..............:.x..:..:........x.....:..:..:..x..:::...:.....:..:..:..................x-....... 15M5D8M13I121M1I7M 123/151 81.5% 165/94230402 0.0% 19/151 12.6% 17823139 NA +8387 chr4 + 190214555 41692270 41692269 41692392 123 TTTACCCTATAGTGTGGAATTTGTAAAGGCCAGCTTGGAGATGCAGTGAGTGGGACGGATGTTAGGATTCGAAATGGTCTCCTGAACTGTAATGATTGCTACATGCGATCCAGAAGTAAGTAC chr4 - 94230402 23867245 23867244 23867367 70363036 70363035 70363158 123 TTCATTTGACAGTGCGGCATTTGCAAGGGACAGCTGGGAGATGCAGCAAGTGGGACAGATGTCAGGATTAGAAATGGTCTTCTGAACTGCAATGATTGTTATATCCGATCCAGAAGTAAGTAC ..:.:::x.:....:..x.....:..:..x.....x..........::........:.....:......x..........:........:........:..:..x.................. 123M 101/123 82.1% 123/94230402 0.0% 0/123 0.0% 17825025 NA +14707 chr4 + 190214555 41697134 41697133 41697870 737 TTTGTTGTTGTTTGTTTTAATCACAGGTGCCGGGCAGCCTACAACATTGTGACACGGCTTTCA--------AGCTTCC-----GGATCACTCACCATTTCTTTACTGAGAGTGTCCCCTGGCAACTGCTTAACAAAATCCCAAGCTCAGGGGCTTCTCAGCATTTACCTAATTTCTGAAAGGCTCTTCTGAAAGGTG--GTATCTGTTCTTTCGTAGCACAGTGTTTATGTTTTTCCTGTTTATTGTTTTGGTTTTTTTTTTTTTTTTGCATTTGCACAGTATACACAAAAGAATATGGGGTTGTAATGATCCTGAATAGCTCAAAAA----AGGTTTTAGCATGGTCAAACAGGCTTATGGTTTAAAATGTGTTATTCTCTTCTTTGGGAATTAGCTA------AATGATGCAATAAACCTGTTTTGTTTTAGAATGTCTAGGAATTAAACACTTTATGTTTACAGAATTGAGCTGCAGAAAGTGCAAGACATGCCAATTTGAGACACACGGTC-TTCTAAGACTGAAGGATAAATTTAATGCATTTCAGAAACTAAACATCACAGCAAGCTCTATCTCTG----------AGCTATAATTTGTTTTTAATGCAAAGACACTAGTTTGATAATATATACTGTAATCCTGAAACATTT-------GTGTTACTTACCTTTGGAGGTAGAAATTATACCAATAAATTATTGCACCGTTAGTATTAGA-------TTCTGTGTACCTTGGAAGTTATG-TCATTAATATAGGCTGG---TTCATCAAATAAAG chr4 - 94230402 23870522 23870521 23871257 70359146 70359145 70359881 736 TTTGTTTTGTTTTGTTTT---TTCAGCTGCTGGACAGCCAACTACATTGTGACGTGACTTTCAGTCCCAGTAACTTTCAAGAAGGAACTCTCTTCTCACGTGTATCGGC--TGCCTCCAGACAATCATTTG-TAAGAGCTTGAATTCATGGACATCGTGGCTCTCATCTCATTT-TGAAAAACTCAT---AAAAGTGCTGCACCTGCTCCTTTAAAATGCAATATGT----------------------TGGTTTTCCCTTTCTTAAGAACTTCGCAAAATATGTATGACCGTATTTGTTAAGGCAAAG--CCTAAGTACTATAACAACAACAACATCCCCCCTTTTCAGGTATGTTTATGATTTTCAGTCTGTTACTTCGTTCTCCTGAAAGTAATAAGAAAACAAACATGCAATAAAGCTGTTTTGTGTTAACATTTCTAGGAATTAAA-ATTTTGAGTTTACAGAACCT-----------TTATAGAATATGCCAAGTTGAGATGAGAAGTAATTTTAAGAT---AGCATCTAATCAGTGCATTTGAAAAACTAAGCATCACAGCACATGACTGCTCTGTTATAACTGAAGCTATAACTTTTTTT--ATACAGAGAC--TAGTTTGATAATACATCCTGTAATTCTGAGACATTTTGTGTTTATATTACCTTCAGCGGAGGGTAGGAGTTATACAAATAAATTATTGCACCTTTAGCAATAGGATTTTTTGTTTGTGTACCTC--AAGTAATGTTCATGACTATAGCTTGATATTCTCTCAAATAAAG ......x.xx........---:x...x...:..:.....x..x..........::.:......--------.:...:.-----...x.x...x:.x:x:x.x..::.:x--..:.:..x.:...::::..:-:..:.x.:::.::...x..:.x..x::..x:.:.:..x....-.....::...x.---...:...--.:.:...:..:..::x.:::..:.:.x.----------------------.......:::...:..xxx:xx..:...x.:...::.::.xx.x..x..xx:xx.:..x.--...:.:..x:x:..x..----.:xx.::xx.x.xx...:::.x.:.....:...xx.:.x.....:.::x....::x.:..x..::x.------..xx..........x.........x...:x..x.............-.:...:x..........::x-----------x.::.::.:.......x......::x:x:..x-..:.....:---..x..xx.x.:.:.......x.:.......:..........x::xx:xx.....----------........:..x....--..:..:....--.............:..x.......:....:......-------:.:....:.x.xx:x.::.....:.:......x................x....:.x...:-------x.:.........:--....x...-....x.x.....x:..:---.::x.......... 18M3D42M8I7M5I26M2D20M1D42M1D12M3D7M2I28M22D60M2D17M4I67M6I46M1D20M11D32M1I9M3D54M10I16M2D10M2D36M7I61M7I13M2D8M1I17M3I14M 458/682 67.2% 736/94230402 0.0% 109/682 16.0% 17826612 NA +17085 chr4 + 190214555 41698833 41698832 41700067 1235 TCATTTCATTAAAAATTGTGCCTTAGAAAACGCAAAGCTGTTGCACAT----GGCGATAAATTATGGATGCAGTACATTGAAGAGAGATGAAGTCACTTCCAAGT--TTCCAAGACTTCTCATGGAGGTGTTTGCTGTTTTACAGGAAAAAATAAAAATAAAAAAAGAAAAAAAGAAAAAATTAAAAAGAAAAATTGTTTTGAAAATGTACAGATCAAGTCCAATATTTTGATTATCCACCTGCATGTTTTATT----AAATATTTTGATAA------TGTGGATGTTTACACTTTGCATGATATTAGCAGAGTA-----CCACTAGTAATGCACAAACATGTACAATATGGTCATTCATAACCGATTTTTATAGAATACTT--TTTACATGTGCAACTCCATCCGTTATGTAAGGATTACATGAATAT---------------------------------------TGCACA------------------------------TTCCCTTC----------------------------TGGTTTCACAAA--------------------------------------------------------------------------------------------------------CCCATTTATACA-TATTTCTTAGTGAGGCTCATTGTACATG---TATTGAAGCTAGAATCGAGTCAAGAAAAATAAAGCCCCA---TTCTCCAACTGCAAAATGTGCTTTCCCATAATGAACA-CTAGTCACCAGCACAGAATAATCTCCAACA-TTTTCTAAATTCTAATTGCCAACTGTTTCTATTTATATTTGATTTATATTTCATTTGGAGTCTGTTACATGGCAGCTT-AGGCAGACTAGATCTTGTT---------------------TTTTCCAATGCAGCATAATGAGTATGATCTATTTCTTTTCAAATAATCTTTGAGATCCCAGGAAAAAAAAAATGCTCTGCTCCATT-GAGCTATAATGTAAATGTGTTTGTTTAAAAAACAGGTGAGGCAAGTGAGTGATTTATTGTTCCTGAGGAAGTATATCTGATTTT----TTTTCTCATACTCCAAAAGCTAGTC-----CCTACTCTTTAATAAAAAT--AATGGGTAACTT------TTTGTTTTTCACTAGCGAACTTCC-ATGA---------CATTTCCTTTCTATGTAGTGTGATTAATGCAATACATATTATAGTTATCTATACACAGTGT---AAGATTTAACAAACTGAAATGATCCACCTC-ATATGTGAGTCCGTCCAAA--AGATGTTACTGCTCTGGGTGGGCCAGTGTTCTATATCGGTTATACTAA-CTTTCATTTAAAGTATTTATTCTAAAATGCCTCTGAGAAACAGTAAAAAATAAAAACAACAAGTTGTCTAAAATGCAACAGCTTTTATAGTAAATGTACATTTATAAATAAAATACTCAAATCAACTTT----GTATTCCATTAATTATTTT chr4 - 94230402 23872087 23872086 23873502 70356901 70356900 70358316 1416 TCGCTTCCTTAAT--TTGTGCCTTAGAAAACACAGAGCTGTTGCACACCGTCAGCGGTGACTTACGGATGCAGTATATCCAAAA------------CTCTAAAGTCCTTCATGGGCTTCACCTGG-GGAATATGTTTTTTTA----AAAAAGCAAAAATGAGAAAAA----------------------------TGTTTTGGGAGTAGAACGGTGGAGCCCAATGTTTTGAGTAACCCTTTGCATGATTTACTCTTAGCAGGTTTTGATAACCAGCATGTTTATGTTTACACTTTGCATGCGGTCGGCGTAATGTTTTCCTGCAGATAATGC-CTAACATGGA-AATGCGGA-------AAGCAGATTTTATCAACTGCTTCATTCACCTGTGCAGTTCCATGTGCTGCGTTAAGGGTATGGGAACATACACAGTGCCTGGGCCTAAGTTTTGAAGAAGACCTTTAGTGCATGCCTGTGTGTCGGTTTGGTCCCAGTCACCGCTTCCCCTCGTGCTGTAGTGTAGGTGTGCAGGAGGGCTGGTGTCACAGATGGGGTGAGCTTATCCTTGACCTTGTGAGGAGAGCCCCGGCTGTCTGGAGCATGCATGGGACTGAAATGCATGAGCAGGGATTGGGTGCAGCATCGCTGGGCTGCTCAGTTATCCAATGTCTGTCCGTAGTGTCAGATGTGCATGCTGTAGTGAATATGATTGTATGTAAAGCAAAATGAAGCAGCAGCGTCCTCAGGCTTCAGA-----TTTTCCCCTAGTGAGCATCTGTTCACCAGCACAGAATAGTTTTCAACAGTTTTCTAAATCATACTTACCAACAGCTT------ACATTCAGTTTGTATTTCCTTTGGAGTCT--TGCATGGCAAATTCATTCAGGCTAATTTCTTTTGGCTTTTTTTTTTTTTCATTTTTTCCTGTTTCAGCACAAC---TGTGATACATTTCTTATCAGGAA--CCTTAAG--CACAGAATGAAACCAACGCTCCACGACATTTGAATTACAATGTAAATGTATTCGTTGCAAAAA-----------------GGATTTATTATTGCTAAGCACGTAGAACGGATGTAATGAGTTTTAAATGTTTCCAAACTTAGTTAGCCTCTCACTACTCCAGAGAACCTGACCAGGTGTCGTAGCCCATCTGTGTCCCGCCGCCCCCCTCCCCATGGTGTGTTTCTCCTTACTTTGCTGTGTAGTGTTATTGACGCCGCACAT-CTGTAGTTTCCAAT---CAGTGTCCCAAAGGTCAGTGCGCCGGAGGGGACAGTCCCTATGTGCGTGCCCAGTCAGGGCAGGGATTGCTGTCCTCGCTGTGCTGATGTTGAATACCATTCACACTAATCTCTCCTTCTTTTTATTTATTCTAAAATGCCTCTGGAAATTAGGAAAAC--------------TTGTCTAAAACGCAACAGCTTTTATAGTAAATGTATGTTTATAAATAAAATGTT--GATTACCTTTGGCGGTGTCACTTTACTTATTCT ..::...x....x--................:..:............:----:...:.:.x...:..........:..:x..:.------------..::x....--...xx:.:....x.x...-..x:.x..:.x.....----.....::......:.:....:----------------------------.......::.:.:x.xx.:.x:..:.....:......x..x..x::......x....:.----:x.x:.........------...xx..................xx:.::..:x.:.:-----.::.x::......-.x......x.-...::..x-------..x.::x......x:.x.:...--..:..x......::.....x:.:.::..x.:.:x..::x...:..---------------------------------------....::------------------------------.....:..----------------------------....x.....:.--------------------------------------------------------------------------------------------------------.:..x....x..-.:.:.x.:x..::x.::x:x...:....---..x....xx.::xxx::x..x...x.....:....xx..---.:...x::..x..:.-----:......x..:...:..-..:x................:.:.:.....-..........:x..x..:.....x.:..------.:...:::...:......x..........--.:.......:x..-.xx...:...:x.::.x..---------------------...:.::x.x.....:..:---.:....x:.......x...::x.--.:..:..--.x...:.x:...xx..:....::.xx....-..::..:...........:..:...xx.....-----------------x........:..x..:..x.x...x.x.x...x.x----x...:xx..::.:.x...x:....:-----.::...x:.:x.x.:..x:--.x::...:x.x.------.:...x.::.:.::x.xxx..:..-...:---------.x..x.:..x..:........x...:.:..x::....-:.:.....x:.x..---......---..::x.:.:::x:.:.:.:x.:x.x::.:.-..:..:.x.:..:x:..::--..:x:..:...::..x.x..x..:::....xx...:.:x.:.:.....-..:..x..:xxxx......................::..x:..x....x--------------..........:........................::..............::.--:..:.x....----..:.:x.x...x.....:. 13M2D33M4I32M12D9M2I18M1D16M4D21M28D59M4I14M6I37M5I13M1D10M1D8M7D22M2I45M39I6M30I8M28I12M104I12M1I28M3I39M3I15M5D17M1I30M1I28M6D29M2D13M1I19M21I19M3D23M2D7M2D30M1I32M17D35M4I25M5I19M2I12M6I24M1I4M9I37M1D14M3D6M3I30M1I19M2I48M1I49M14D54M2D10M4I19M 767/1122 68.4% 1416/94230402 0.0% 407/1122 36.3% 17826746 NA +3080 chr4 + 190214555 41708261 41708260 41708319 59 TTTTATATATATATGTGTATATATGTGTATATATATATGTGTA------TATATTATATATATAT chr4 - 94230402 80748292 80748291 80748356 13482047 13482046 13482111 65 TTTTAAATATATATGTGTATGGGTGTGCATATATATATTTTTAAGCTTTTAAAATATATATACAT .....x..............:x:....:..........x.x..------..x.x........:.. 43M6I16M 49/59 83.1% 65/94230402 0.0% 6/59 10.2% -39040031 -55190371 +21309 chr4 + 190214555 41714595 41714594 41715702 1108 GTGTGCTTTTATTTCAGATGATTATGAATGTTCCAAGTGGACTCATTGCAGCCACCTGGCTTAAGGACTGTAAGGCACTTCGAAAATCAAATTTCAGGAGAGAAGATTGATTTGAGAAACAATGAACAAGGAGAAATCTTCCCT--TTGCAGAGCTGCTGTGTGTCAAAGTTTATCCTCATTATATTA-TGGTGGGAAGAAAAGAACAAATTAAGACATTTAACTGCTTAAAATTTGAGACCCAATTGCATTTAACACCACAAATCTTGTTACTGGACCTGTGGGCTTACCTTCTCCC-TATGTGAAGTCT-GGTATGTGTTAGCAAATCACATTTTTAA----AAATCAGAGAATGGATCTGGGCTA-AGTG-----------GATAATCACTGTTCACGTTCCCCGTCAGATAAGAGAAGATCCTGTAGAATCCAAAGAGTTTTTAAATTAGATCAAAAGTCCCTATAAGGAGAAATACCTTAAAATTACCTTCTTACCTGGCCACCATTGCTAGCACT-AGCACACTTTAAATTAATAGCAACCACGTGATGGC----AGAATTTCTAACTTTTAACATAAGGGGCCACTCAAACCTTCAAACTA---CCCTTTCAAAATTGGCATCCATAATGAAAGAACCATTAAGGGCTT-AGTGATGTTCCAAGAACTCTTCTTCAAGAAAAATAAATAAATAAAGAGAGAGAAGGAAAAAAAATTGGCTCCTTTTCTTTGGCCAGTAACCCACATTTTAATTGAATTTTGATGAGATGATGGATGTTGTACTGTATTCCAAGTCTATATGCTAAATTAACAAGGCTGTCTGCTTAGTTTCCTCTTTTGAAGGCACATTGAGATGAGCGTCTGCTAATTCTCTTACATAAAGCATGATGAGGATGTCTCAAATTCCTGTTTAGTGCCTGGAATCACCCATTTTCTCCAAGCTGGTTTC------------------------ATGCTGAAACAA-AACTATCTGGTTTAAGGAAAAACTCCAAGCAGAATCATGTTCAATCAGCCGGGAGGAATAAATCTCAGTATTTCAAAGGCATCTGCTAAAGCATTTAAAACTTTCTAACCATATTTTAAAAGACTTATTTGTGCATCTCTTTACAGTAAGGACATGTCTCCAGTGCTAAAT chr4 - 94230402 23877192 23877191 23878216 70352187 70352186 70353211 1025 GTGTGCTCCGATGTCGAGCCATGACAAGCACTCTGA-TGCA---ACCGCTGCCATCCAGCTGAGGGACTG--AGGC--TTTGTAAATCAGATTTCAAGTAAAGAGATTGGTTTGAGAAAC------------------CTCCTTCATTGCGGAGTCACAGGCTGTCAGAGTTTATTAGCGTTATGGTGCTGGAGTAAAAAGCAAAACAAATTAAGATGTTTAACAGCT-GAAATCTGAAACAAAATTGTGTTTAATGCTGAAAATCTTGTTAACATATTTTCAGGCTTCCCTTTCCCAACATATTAAATCTCAGAACATGTTTGCGAG-CATCTTTTTACCTCCGTGGCAGCAGGAGGACACGGGCTGCAGTGCGGTGCATGGAGCCGGACACTGT----GACCTCAACCA--TGGTAGCAGGGCCTGGAGGA-------------------AGAGCAGGAGCC-------AGAG-----------------CTCTGTATCTA--------TGCAGGCAGGGAGCA---------TCACCAGCAGCCAGGAGCCCGCCTGTACAGGCGCTGGCTCTTAATGGGAGGGGTAATCTGAACTCCCAAACTGGTTTCCTTTCATG-TTGGCTCCCACAATGAAAGAACCATTAAGGGTTTTAGTGATCTTCCAAGG-CTCTGCTTCCAGCAGAA-----------------------------AATTGGCTCCTTCTCCTTGGACGCAAGACCAATTTTTAATTGAATTTCAA-GAGATGATGGATGCTGTGCTTTATTCTGAGTCTATATGCTAAATTAACAAGGCTGTCTGCTTAGTTTCCTCTTTTGAAGCCACACTGAGATGAGTTTCTGCTAATTCTCTTACACAGGGCATTGGACATGTGAACCAAGCCCTTATTCAAGAGCTGAAAT-AGGCATTTTGGCCAAGGTTATTACTCTGGATAATAAATTGGTGCTGTGAGGCTGTGACAATAATTAGCT-TTCTGAAAAAGACTTATGGATTGAATTATTTCAAATGGATCAGTGAAAATAAAACTAAACATGTCGGATATTTTCACCAAAGTATTTTAAAATTATTAGTTAACATTTAAAA----------TGTCTCTCTTCAGGGAAGGAATATCCCATTCACGCTAGAT .......::x..x..::::x..x.::.::::..::.-..x.---.::..x....:.::...x.:......--....--..:.x......:......:.x:.::......:..........------------------:...:.--....:...:::.x.xx.....:.......:xx.:....:x.:-...x.x:..:.:x.:............::......x...-:....:...:..xx.....::.....::.::x...........x::x.::.x::.....x....::..x-:..:.x..:...-:.x.::....x..:.:-..:x......x----:x:x...x:::x...:x:.....:-....-----------.x:::x......----.x:.:.x::..--.::x..x..:x....x..:.-------------------...x..::..:.-------:...-----------------..::x..:..:--------...x:...xx-....---------.:.x:....:...x.x.x:x..----.x.:x:x..::..:....::x:.....:x.::::...:::......:---:.......x:-.....x:...:....................:..-......x.......:-....x....x..x.:..-----------------------------............:..:....x.:xx.:x...xx..............::.-.............:...:..x.....::...................................................x....:.........:x..................:.::....x:x:x:x:..xx:...:::.:.:..:.:x:x...:...-.xx......xx.....x.x:..x.------------------------.x....x:....-..:..x..-x.:.:.::..:.x:.x:::::x....:..x.:x...x:::.:.x:::......x..x.::..x..::.x::x.:::.:....:....x...x..x:..:::.xxx.......----------..:x......:.x:.x.:.:.:..x:.x::x::....:.. 36M1D4M3D26M2D4M2D42M18D6M2I42M1I39M1D69M1I12M1I16M1D11M4I24M1I4M11I12M4D11M2D20M19D12M7D4M17D11M8D10M1I4M9D22M4I47M3I10M1D34M1I15M1D17M29D50M1D160M1D24M24I12M1I8M1D112M10D40M 647/970 66.7% 1025/94230402 0.0% 193/970 19.9% 17837403 NA +3081 chr4 + 190214555 41723184 41723183 41723236 53 AAAAAACAAAA------AACAAACAAAAAAAAAAACTTACACAACCAATGAAGAAAATG chr4 - 94230402 56666155 56666154 56666213 37564190 37564189 37564248 59 AAAAAACAAAATAAACAAACAAACAAAAAAAAACACCTGCACAGCAAATAATAAAAATG ...........------................x..:.:....:.x...:.x:...... 11M6I42M 45/53 84.9% 59/94230402 0.0% 6/53 11.3% -14942971 -79287431 +3230 chr4 + 190214555 41737912 41737911 41737981 70 AGTGAAACTCCACCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGA----------AAAAGAAAAGAAAGGCTAAG chr4 - 94230402 4077721 4077720 4077800 90152603 90152602 90152682 80 AGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCAAGAAGAGGGAACAGAGGCTGGG .......:.:.x:..x.............x.:.....:.::....:....----------..:..::..x.:.....::. 50M10I20M 52/70 74.3% 80/94230402 0.0% 10/70 14.3% 37660191 NA +3092 chr4 + 190214555 41743986 41743985 41744050 65 TTATCCTTTTAAAAAAAAACTTAAAAAAAAAAAAACAATGACCAACCAAAAAAAAAAAAAAAAAA chr4 - 94230402 56277904 56277903 56277968 37952435 37952434 37952499 65 TTTTACCTTGAAAAAAGCATCTAAATAAATGTGAAAAATGAGCAGCCAAAAGAAAAAAAAAAAAA ..x.x.:..x......:x.::....x...x:x:..x.....x..:......:............. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -14533918 -79696484 +27273 chr4 + 190214555 41744066 41744065 41744608 543 AGAAGAGTTCAATTGCTAGACTTGCTTTTTGTTTTTATTATCAACAATCAAGTTAATGGTACACTCTTGGAAAACTATATGCACATGTAGAAATATTTCCC-TTTTAAATAGAAGCATTCATTATAAC-ACATATAAATAAATTCAAAAATCTGAAACATAACTTATGACAATTATGTTCACAAACATAGTCCAACAGGAA-----------------------------------AAAAAAAGAAATCAGACAGACATGCACCTGATAACAAAAATATATACCATTGTCTGAACCGTGGCCTCTCTAAACACAAAAG--ATTGAACCCGTGAGAACCTTATTACACCATAAAGACACGCCATAGAGACTACAAGAAGAGAAAAACATT----ATACGGTCACGTAGAGGAGACA-GTCTGCACTGATATTAACACGATACAATTGAGTCACAGAACACAGTTGTAGAAAGACACCGAAAAAGTTAAAGCCT------CAACATTCAACTAATATCTAGAGTTTGTGCCTTTTAAAATAAAAACAACAACAAAGAATCAAAACAGAGATGTCT--AAACTGCGCGAAGAATGGAA chr4 - 94230402 23885677 23885676 23886253 70344150 70344149 70344726 577 AGGAGAGCTGCGGTGCCGTATTTGCTTTTGGTTTTTATTATCAACAATCAA-TTAATGGTACACTCTTGGAAAACTATATGCACATGTAGAAATATTTCCCCTTTTAAATAGAAGCATTCATTTGAACCACATATAAATAAATCTGAAAATCCTGAACATAATTTATGACGATTATGCTCACAAACGTATTCCAACAGGAAGGCgaaaagaaaaagaaaaagaaagaagggaaaagaaaaagagaaagGAGAC-GACATGCAACTGAGAACAGAA--AGATCCCATGGCCTGAA-CGGGGCCTCGCTAAACGCAAAGGGAACGGAACCCGTGAGAACCTTACTTCTCCATAAAGACACGCCATAGAGACTACGAGAAG-GGAAAACGTTATTCATACGGCCA-----ACTAGACACGTCTGTACTGATA-TAACACTATACAGCTGGGTCACGGAACACAGTCGTAGAAAGACACAGAAAAAGAGAAAGCATACCTGCCGACATTCAACTAAGAGCTATACTTTGTGCCTCTTCAAACAAA------ATTAGAAAACCCTAACGGAGATGCCTAAAAACTGCGGGAACCGTGGGa ..:....:.xx:x...::x.:........x.....................-.................................................-.....................xx...-..............:::......:x:.......:.......:......:........:..x...........-----------------------------------.....:.....xx....-........x....x....:..--.x..x....x.:.....-..x......x......:....:.--.:x..................:.x.x..........................:.....-.:.....:..----......:..-----.xx.....-.....:.......-......x.....::..:.....:.........:............x.......xx.....x.------.:............x.x...x.x.........:..x...:...------.x:.:.:..:.xx...:......:..--........x...xx:...:. 51M1D49M1I26M1I72M35I17M1D21M2D17M1D23M2I58M1D10M4I9M5D8M1I13M1D62M6I43M6D26M2I20M 443/525 84.4% 577/94230402 0.0% 70/525 13.3% 17858389 NA +18814 chr4 + 190214555 41745992 41745991 41746358 367 CCGCCGCCGCCGCTGCCGCGGCCGCCGCCGCTGCTGCTGCGCCGCCC--TTGCCGGGTTCGCCTCCCGGGCCCCCGGGCCCCGCCGCCCCCGGAGCTCCAGCCGGGCTGGGCCCGCCGCCGCCGCCTCCATTCGCCCCGCAGCTGGGGGTGGGGTTGGGATTGGGACCTGGGCCCCCAGTGCTGTCCGGGTCAGTGCTCTTGGCCTCTTTGCTCTCGTCGTCCCTGGAAGAGTCAGACTTTTTGCCCGAGGAGCCGTTCTTGGCCGCGGCCGCTGCGGCTGCCGCTGCGCGCTCCTGCTTGCGAAACTTGGCGCGGCGGTTCTGGAACCACACCT------GGCCCAAGACGGAAGGAGAGACGGTGAAGCAGGG chr4 - 94230402 23887050 23887049 23887404 70342999 70342998 70343353 355 CCAgccccgccgccgcca-gcccgccg-------ggccccgTCGCCCATTTACCCGGCTCTCAAcccgggccgccgggccccaccgccccctgcccgcccgcggggctgggcccgccgccgccgcc------------gcAGCTGGGCGCGGGGTTGGGGTTGGGCCCGGGGCCGCCGGTGCTGTCGGGGTCGGTGCTCTTGGCCTCCTTGCTCTCGTCGTCGCGGGAGGCGTCCGACTTCTTGCCGGCCGCTCCGTTCTTGGCGgccgccgccgccgccgccgccgccCGCTCCAGCTTGCGGAACTTGGCGCGGCGGTTCTGGAACCACACCTgcgggcgggccggggcggcgggTGGCGAGGTGAGCCGGGG ..:x.x.......:...:-.x......-------x..:x..:.....--..:..x..:..x.xx........x.........:........x.xx.x..x..x.......................------------.........x.:.........:.....x..x.....x..:........x.....:..............:..............x.x...:.x...x.....:.....x.xx.xx...........x..x.....:..x..:.....:..x......x.......:...............................------..x..::.:...x:..x.:x:x.....:x.:... 18M1D8M7D13M2I77M12D197M6I34M 279/347 80.4% 355/94230402 0.0% 28/347 8.1% 17858942 NA +3424 chr4 + 190214555 41746331 41746330 41746383 53 AGACGGAAGGAGAGACGGTGAAGCAGGGGGAGAAAGAAGAAAATGGGAAAGAA chr4 - 94230402 23966880 23966879 23966932 70263471 70263470 70263523 53 AAACAGAAGGAGAAACAGAAAAGACTGGGGAGAAAAAAGAAAATGGGAAAGAA .:..:........:..:.x:...xxx.........:................. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 17779451 NA +115002 chr4 + 190214555 41747337 41747336 41749358 2022 AGGCGCGCGTACCTGGACTCGCGCCTCTGTGAGGTCGATCTTCAGGGCCAGCTCCTCCCGAGTGTAGATGTCGGGGTAGTGAGTCTCCGCGAAGACCCTTTCCAGCTCTTTGAGCTGGGCACTGGTGAAAGTGGTGCGGATGCGCCGCTGCTTGCGCTTCTCGTTGAGGCCGCCGTGGTCCGTGAAGAGTTTGTAAGGAACTAGAGTATGACA---------------GAGGAGACAGAAAGTGAGCAAATCAGCCGGCAGCTCGCCGGCC--------------GTGGAGCTAGAATGTG-------AGGACTCCAAGGTCAGGTCA-TACGGCAGCCG--CTACCTACACCCGCGCGAGAGAGTTGCCGAGAGAAGCTGCGGGAAGAAACCGAGGAAATTTGTTATCTGCGGAAACCTGGGCTCAAACTTCGGGCTTGGCGGAGTCCTTTCTGGCACAAGCGCCTTTGGGTGGATTGAAACAGCGCGATGTGACGGACTTGAGATAGTGCTTTCAGCAGGAAAAAACCAGAGAGGAAAAAAATCCAAAAA-------CATCAGTCGGAA---TATCAGGGAGCC--------------AGGAAAGAAGTTACCAAACAGTCCCACTTTGGGA----ACTTTTCAATTCTCAGAAAGTTGACCCGGCTCAAAAGT--TGGGGGAAAGAGCTGCAAAAAAATAATAATAAATTAAAGAAATAATCATAAAAATGACCAGCCAA----AGAGGTGTG-AGCCGCTGTCGG--------------TTCTTAAAAAAAGAGACACTGCCAGTAATGAGCTTTACTCTTTG-TTATTTAATTATTTTCTAAGCTTTACGTCTCATCGCAAAGTAAATAAATTATGCCTATCATTTTGGCAGCTTAAGATAATTTTGTTGGCGGTTCGGGTGTGACTAGGATAGTGTAACCCTGTAAGTGAATTACCCCTCCCTGCAATCGCTTCTAACGTGATAAATTCTTTCATTTGTGTAAGCAAATTTCGTTTGGTAAATACTAAACACATTTCCATTTTCAAATGCAATCAAGGCTTCCTATATACGGGCGGAAAGGCGGCTTCCTCCGCTGAGAAAGCTGAAGGTCCTTACCTGCGGCGTACGGACTGCTCTGGTGGTCCCTGAGGGTGCCCAGGCTGCAGGATCCCGGCGTGAGGGAAGGGCAGCCGGACGTGGCCCCAAAAGTGGTCCTTATCGGGTTATACTGGAAGCCACTGGCCTGGCTGCAGGAACTGAAGTCAGCATAGGCTGAAGCCAGGCTCGAGGTGTCCATCCCAGCCATACAGGACTCGTAGGCAGAGGAATTGAGGTAAGAATATTCCATTTTATACATTGAAAAGGTTCTGGATGGCTCAGCCAAGTGGAA-AAATGAAATAAAAGATGG--ATATGGAGAAGGTGGCTGGAGTGGGGAGATGTGCACAGCTCAACGCCTGCCTCCAAACTGGCCTCCTTACTACCAGCAGAGCCTAGTTTTATGAAAAAGCCTCCTATGAGATGCCTTGTCTGAGGTCTCTAGAGCATATAGTCCTCATAATAAACTTGGCTCTTTCCACTTGGACAATAGCAAAGCGGTTGGTCTTATTGCTGGCGCTTTTTACATGACAATAACTCATCCGTCTATTGGGCTGGCACTGGGGAACTGAGCTGTCCAACCTCCCTATCATTGATTCCTGCATCTCTAATTAGAATTTAATACCACACCATTACGCACCGAGCCCCT-GATCCTCCCTTCTAACCAGCTCCCTGCCCTTTAATTCAATCACACTACTTGGAAATAATGAAAGTTGGGTGACGATTCTCCCTGATCCAATTTCCCCGAGCTTTTAAGCCTTTTTAACTGATCATATACCTTAGGCATAAATTGAGATAGTGTGTGTGTTTTCCCCCTTCTTCGTCCT------------CTTCTTTTT--------TTCCCCCTCGGTTAGGGAGAAGAAACCTTGATGTCATAGA-AAACCTGTTTTGTAAGAGTGTTACACGCTCAATTTAACAACAAGCCTACCCCCCGAAGTGCATGAAATGTTATAAAGGACTGGGACATTGGCAAGACTCAGGCGCCCTGTAACATAGAGTAAGTGGGCCAAGGG chr4 - 94230402 23887523 23887522 23889550 70340853 70340852 70342880 2028 agccgccCGTACCTGCACTCGGGCCTCGGTGAGGTCGATCTTGAGCGCCAGCTCCTCCCGGGTGTAAATGTCGGGGTAGTGCGTCTCCGCGAACACCCGCTCCAGTTCCTTGAGCTGCGCGCTGGTGAACGTGGTGCGGATCCGCCGCTGTTTCCGCTTCTCGTTCAAACCGCCGTGGTCGGTGAAGAGTTTGTaaggaactgaagaaggaaaagagggaagaaggaggaggaggaggagaagCCGTGAATCACTCGTGGCTCCGCTGGTCCGGAAAGACGGGCGGCGGCTTCAAAAAGCGTCCTCGGAGCGCTCCCAGCGCAGAGCAGTGCGGCGGCCGTCCGGGCAGCGACCGCGCAGGGGGGAACGCGGGGACGGCCggacggacggatggaggga-------------gggagggagggagaga------------gCGGAGCGC---------CGAACGCGCCCGGG--------GCCGGGACGAGGTG-CGCCCCCGGGGCTGCGCC-----CAGG---------GAGAGGGGAAAACGCCGGGAAGTGCCGGCGAGCGTCGGAAAGACATCGGGCTGCCCGCCGGCTCCGTTCAGTAATGACATTACCGAACCGCTCCGGTCTCGGGTTGCGTTTCCCCGGTCTGAG--------CCCGGCCGGAGAGGCATCGGTAAAAATGCTGTAAAAAGA------------------------------ATGGGCAGCGAGCAGCGGGGCTGCGCGGCCGCCGCTGGGCTGGGTCTCCTTTTTTTTAA-------GACAGTGTCAGTAATGAGCTTTACTCTTTGGTTATTTAATTATTTTCTAAGCTTTACGTCTCATCGCAAAGTAAATAAATTATGCCTATCATTTTGGCAGCTTAAGATAATTTTGTTGGCGGTTCGGGTGTGACTAGGATAGTGTAACCCTGTAAGTGAATTACCCCTCCCTGCAATCGCTTCTAACGTGATAAATTCTTTCATTTGTGTAAGCAAATTTCGTTTGGTAAATACTAAACACATTTCCATTTTCAAATGCAATCAAGGCTTCCTATATACCAGCGGCGAGGCGGCTGCCGGGG-TAAGAAAGCCGGAGGTCCTTACCTGCTGCGTAGGGGCTGCTCTGGTGGTCCCTGAGCGAGCCGAGGCTGCAGGATCCTGGAGTGAGGGACGGGCAGCCTGAGGTGGCCCCGAAAGTGGTCCTTATGGGGTTATACTGGAAGCCACTGGCTTGGCTGCAGGAACTGAAGTCAGCATACGCTGAAGCCAGGCTCGAGGTGTCCATCCCGGCCATACAGGACTCGTAGGCGGAGGAATTGAGGTAAGAATATTCCATTTTATACATTGAAAAGGCTCTGGATGGCTCAGCCAAGTGGAAGAAATGAGACCGGAGCTGGCTATGTGGAGAAGGTGCCTGTGGTGGGGAGATGTGCACAGCTCAACGCCCGCTTCGAGAGTGGCCTCCCTACTACCAGCAGAGCCTAGTTTTATGAAAAAGCCTCCTATGAGATGCCTTGCCTGAGGTCTCTAGAGCATATAGTCCTCATAATAAACTTGGCTCTTTCCACTTGGACAATAGCAAAGCGGTTGGTCTTATTGCTGGCGCTTTTTACATGACAATAACTCATCAGTCTATTGGGCTGGCACTGGGGGACCGAGCTGTCCAACCTCCCTATCGCTGATTCCTGCATCTCTAATTAGAATTTAATACCGCACCATTACGCACCGAGCCCCTCGATCCTCCCTTCTAACCAGCTCCCTGCCCTTTAATTCAATCACACTACTTGGAAATAATGAAAGTTGGGTGACGATTCTCCCTGATCCAATTTGCCCGTGCTTTTAAGCCTTTTTAACTGATCATATACCTTAGGCATAAATTGAGACGGTGTG---GTTCCCCGCCGCCCCCCTCCCGCGGGGGATTTATTTATTTTTATTGTGTGTGCGCTCTCGGTTCGGGAGAC-AAACCTTGATGTCATCGAGAAACCTGTTTTGTAAGAGCGTTACACGCTCAATTTAACAACAACTCTACCCCCCGAAGTGCATGAAATGCTATAAAGGAGCGGGACATTAAC-AGGCGCGGGCACCCTGTAAAATAGACCAAGTGGGCAGTGGG ..x...x........x.....x.....x..............x..x..............:.....:..............x...........x....x:.....:..:........x..:........x...........x........:..x...........x.::...........x.....................::..x.x..x.---------------......:x:..:.:xxx.::.....x:..xx:x::...:..:.--------------.:..xx::.:..x.:.-------..x:....x..xx...:x..-.:....:....--.x:x.x:.:x......::.:.:.xxxx..:.::x:..:.x:x.:.x::.:x....:.-------------..:.:xxx...xxx:.------------......:x.---------.:.:...x:::...--------:x.:.x:...x...-..xx.::.:.::x.:..:-----....---------......::....xx..:::..-------.:xxx.......---:...:..xx...--------------..x..x..x:.....:...x.::..:x.:.x..:----::..::.x:x...x..--------......:x:.:..x--.x..x:...:x....:.....:.------------------------------...:x....x.:----:.:.x..:.-:.....:.::..--------------..:....-------....x..:......................-........................................................................................................................................................................................................................................................x:....x:........x..xxx.-.:.......:.:..............x.....x..:....................x.x...x..............:..x........x........x..x........:..............x.......................:..........................x.............................:....................:...........................................:........................-......:.:x::..x...--..:...........x...x:...........................:..:..x.:.x........:...................................................:...............................................................................................................x......................:..:.....................::.................................:......................-.............................................................................................x....x................................................::.....---...::..x..x:.::.x...:------------:..x.....--------.x.x.:.......x......x-...............x..-..................:........................x:........................:.........x:........::.-..:.x.:...:........x.....x:........x:x... 213M15I43M14I16M7I20M1I11M2I57M13D16M12D9M9D14M8D14M1D18M5D4M9D21M7I12M3I12M14I34M4I16M8D14M2I23M30D12M4I9M1I12M14I7M7D30M1I271M1D296M1I18M2I336M1I154M3D21M12I9M8I21M1D18M1I92M1D41M 1629/1914 85.1% 2028/94230402 0.0% 222/1914 11.6% 17859814 NA +5607 chr4 + 190214555 41747347 41747346 41747505 159 ACCTGGACTCGCGCCTCTGTGAGGTCGATCTTCAGGGCCAGCTCCTCCCGAGTGTAGATGTCGGGGTAGTGAGTCTCCGC--GAAGACCCTTTCCAGCTCTTTGAGCTGGGCACTGGTGAAAGTGGTGCGGATGC-GCCGCTGCTTGCGCTTCTCGTTGAGG chr4 - 94230402 34864252 34864251 34864408 59365995 59365994 59366151 157 ACCCGAACCCGGGCCTCGGTGAGGTTGGTCCAGACGGCGATCTCCTCGCGGGTGGACATGTCGGGGTAGCG-GTTCCCGCTGGAAGGTGGCCTCCAGCTCCTGCAGCTGCTGGCTGGTGAA----GTGCGTCCGCTGCCGCCGCTGCCGCTTCTTCTTGGAG ...:.:..:..x.....x.......:.:..:xx.x...x.x......x..:...x.x............:.-..::....--....::xx::........:.xx.....xxx:........----.....xx:..-.....:...xx.......:x...::. 71M1D8M2I39M4D10M1I26M 111/154 72.1% 157/94230402 0.0% 8/154 5.2% 6883095 NA +32641 chr4 + 190214555 41750028 41750027 41750860 833 TTTCATTAAATCCTTCCTCTCGGTGGACAAGAGGGGGAAAGCTTAGCTGAATCGCCGTGTGGTGTAAACAAACCCTGGATATTTTATATGAATTAAATGTGTAGATAATTAGTTTTATTGCATTCATTACCCCCTTTATGTGCTCTGTAACAAGTCAGTAATTAAAGTAACAAACTCATAAAGTCTTTATAGGGGCATTTAGG--CGTTCAGTGTTTGCCAAACTAAGTGGTTTAATTCGATGCTAGTGCCGGGGAGTGGATGGGCTCCCGCTCTCCCCTGCCACCGTGTTTTATTGCGCACTAAACTGCCGCGGACGCAGTAATGGATTAAACGGGGACAGCGGTCCCCCAGCCTTGTGCTTCTTTGCAGGGTGAGTTTCAGGCTCGTTTCAGGTGGTTGCAAATCCTCGGGGCGTGAGGAAGCGCTAAAGTCGGGAGTGCAGGGAGCCGGACCTACCGAGGATCCTGGTGATAGTTTTATGGGGAGGGCTGATAGTTTTATTGCAGTTGTATGTTGTACAATGCGTATTTGATAAAGAAGGGCCCTTGGTGACCAGTGTGCACTTTTTTGTGCACGGGGGTGAAATGAAAATAAATGTATACAAGGTTTTACTGCGGCG--GGAAACAAATTGCAACGCTCTAAATGGT-TTTTCTTTATGGTCACCAGACAAGAGGAGAAAAGGGATGCAAACATCTGTCTTCAGTCCCCTAAACCTAAAGGCCAGCAAAGACGGATGCGAATCCAAGTGCTATTACAGCGGAGATTTGTCTTTATTTATCC-CGCTCTCATGAATATGAATTTGCATTTGGGCCGG-GAGGTGGCTGTATCCCTTT chr4 - 94230402 23890163 23890162 23890898 70339505 70339504 70340240 736 TTTCATTAAGTCCTTCCTCTCGGTGGGCAGC--GTAGAACGCTCGGCTAAACTTCGCCGCCGCATAAGCAAATAGAGGATATTTTATATGATTTGAATGTGTGGATAATTAGTTTTATTACATTCATTACCCCGTTTATGTGCTCCGTAACAAGTCGGCAATTAAAGTAACAAAGTCATAAGGTCTTTATAGGGGCGTTTAGGCACGCGCAGCGTTTGCCGAGCTCAG-------------TGCTCATGCCG----------AGGCTGCCCATCGCGCC---------GCTTCGCCCCACATCAG------------GCGGTACTCAAT--------GGCAGCAGT-----------------------------ATTTTGGGGCACGTC-------GCTGTGAGTTACCGGGGGGCAATAAAAC----------GACGCGAAAGATTCTCGAGCCTCTGAGGGGCCGGGTGAGGGCTTTATGGCGAGAGCTGACGGCTTTATTGCGGCTGCATGTTGTACAATGTGTATTTGATAAAGAACGGCCTTTGGTGGCCCGTGGACAC-TTTTTGTGCAC--CGGCGAAATGAAAATAAATGTGAACACGGTTTTAGTGCGAGGGCGGAAACAAATTGCGG-GCTCTAAATGGTCCTCCCTTTATGGCCGGCAGACAAGAGGAGAAAGGCGCTGCCAACATCTGTCTTCCGTCCCCCAAATCTAAAGGGCACCAAAGAATGATGCGAATCCAAGTGTTTCTACAGCGGAGATTTGTCTTTATTTACCCGCGCTCTCATGAATATGAATACTCAGCTGGGGCAGCGAGGTGCCTCGCCCCCTCT .........:................:..:x--.x:...x...::...:..::x.xx:.:x.::...:....:xxx...............x..:.......:................:.............x...........:..........:.:...............x......:..............:......--..:x...:.......:.:..x..-------------....x:.....----------:....x..xx..x.x..---------.:..::::x.:..::.:------------..:...x.x:..--------.:....:..-----------------------------.x...x:...x...:-------.:..::.:.:x:.....x.::.x:..:.----------.:x.:.x.:.:xx.:x..x.:x.:....:x..x.....x:.:.......x...:.....::.:........:.:..:.............:...............x....:......:..x...x:...-...........--x..:.................:x...x.......x....:x.--.............::-............-:.::........:.:x................:.x.x...x.............x......:...:.......x..x......xx................:.x:.........................:..-...................x:x..x:....x.:.-......x..xxx:....:. 31M2D170M2I23M13D11M10D17M9D17M12D12M8D9M29D15M7D28M10D130M1D11M2D42M2I15M1D12M1I133M1I34M1I19M 566/729 77.6% 736/94230402 0.0% 111/729 15.2% 17859865 NA +11956 chr4 + 190214555 41752095 41752094 41752329 235 GCCCCAGCCCCAGCGCCCTGTTTTGTTCCAGTTGTGCTTTCTACACGCGAGC---TCTCCCCTAAAAGTTGTACTAAATGGTTAATTTAATTATTCCAACTATAGACCAACTGCTTCAGGAGCCT-CCACCACGCGTCTGG-GAGGAAAAAAGAAACCATCTATAAGAAATAATCTAATAAAAGTGAAGTGTAGAAAAACCCCTCCTGATTTTCAACCGGCACAAATAGAATTA-AGCTTC chr4 - 94230402 23891127 23891126 23891364 70339039 70339038 70339276 238 gcccccccgccgggggcccgc---gcTCCAGTTGTTCTTTCTACACGCGAGCGGCTCTGCCGAAAAACTTGTAGCAAATGGGTAATTTGATTACGGCCACTATAGGCCAACTGCCTCAGCGGCCTTCCCCCACGCGTCTGGCTGGGGGCAGAGAAACCATCTCCAAGGAATAATCAAATCAAGGCGAAGTGTGGAAAAACCCCTCCTGATTTCCAGGCGACACAAATAGAATTAGAGCCTC .....xx.x..:.x.x..:.:---.:.........x................---...x..xx....x.....x:......x......:....:xx.x.......:........:....x:....-..x............-x:..::x.:...........x:...:.......x...x..:.:.......:...................:..:x..:..............-...:.. 21M3D28M3I70M1I15M1I92M1I6M 186/232 80.2% 238/94230402 0.0% 9/232 3.9% 17860968 NA +6553 chr4 + 190214555 41754049 41754048 41754401 353 AGCAGAAGGGGCTGCCTGTTACCTTTTTG---------CTGGAGTTTGGCTAATAGTAGTAACATCTGCTGGGCTGGTGGGGGGAGACATGGGGCATTTGATGTAAAAGTGACACAGATGTAAAAGTGACATCTGCTTGTAACAAAGGGGAACCAAAATTAAATTAGCCAGGAAGCCCTTTCTGT--TTAAACCCAGGGGAAAAAAAAAAAAACCTATTTGAAGAAGGAGGAAAAAAAGTAATCATGAGCCCTGAC--CAAGCT-TGCAGGGTGCAGAGGGGATTATGATTTTTTTGAGCCAGCAGCTCCCA--AAATAACTGGAGGAGCAGCATCCTAAGGTAGCA-ATGTCCTAAGACCTTGAAGGCA chr4 - 94230402 23891975 23891974 23892307 70338096 70338095 70338428 333 AGCAGAGGGATCTGCGCTTTGCTTTTTTTTTTTTCCCCCTCGCTTCTGCC--GCGGCGGCAACATCTGCTGGGAGCAGGAGCCGGGAGATCGAGCA---GACG---------CACAGATGTAGAAGTGACATCTGCTTGTGACAAAGGAG--CAGGAATTAGATTAGGCGGGGAGGCCTTTCTGCCATTAA----AGGGaaaaaaaagaaaaaaa-----gaaaacagaaaaaaaaaaaaaaGCG-AAATGCTGGCTGTAAGCTGTGCAAGCAGGGGAAGAGGATGTGA-------AAGGCAGAAGTGCTCAGCGGGCAGCTGCTGGGACAG----CCGGGGCAGCACAGGTCCTGGGAGCTGGAGAGCA ......:..:x....x:x..:.:.....x---------..x.xx.:..x.--:::.::.:.............xxx:x.:.xx.:..x..x.:...---..:.---------..........:.................:.......:.--.x::.....:.....x.:..:..x........:--....----....:.......:.....xx-----...:.x:..::.......:x..x.:-:.::x...:.--:.....-....:.xx.x:..:.:.:x.:...-------:..x...x..:x.:..--::::.:...xx..::...----.:::..:....-.x.....::..x..x..::... 29M9I12M2D44M3D4M9D38M2D33M2I4M4D20M5D25M1D10M2I6M1I24M7D16M2I18M4D11M1I22M 216/316 68.4% 333/94230402 0.0% 54/316 17.1% 17862074 NA +3155 chr4 + 190214555 41761188 41761187 41761251 64 GGGAGAGAAGGAGGGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAGAGAGAGAAAGGAAGG chr4 - 94230402 69066686 69066685 69066749 25163654 25163653 25163717 64 GGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG .......:::::.:......:...:......x...x..:.:....:.:...x.:.::x..::.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -27305498 -66924904 +3184 chr4 + 190214555 41783341 41783340 41783456 116 AAAAGTATATATA-AATACATTTTTTAA--AATGTATCTTTAAAAAATGTATATATATATATATATGTATATATATATATATATCACATTT------GAAATAATTGAGGCAA--TGATTAAAACTT chr4 - 94230402 78881529 78881528 78881655 15348748 15348747 15348874 127 AAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATAGAACACATTTTCAACCAAAACAATGCAAAGAATGTGGTTTAAACTT ...xx.....x.:-....:::...:x..--..::...:.x..:.x...xx.......:...:.:.x:.........:....x.x.......------:...:...xx.::x..--..:..x...... 13M1I14M2I61M6I16M2I12M 82/116 70.7% 127/94230402 0.0% 11/116 9.5% -37098188 -57132214 +3039 chr4 + 190214555 41791365 41791364 41791403 39 CAAAAACAAACAAACAAACAAAAATATTCCAGATGCTTG chr4 - 94230402 11397192 11397191 11397230 82833173 82833172 82833211 39 CAAAAACAAACAAACAAACAAAAATATCTGAAATGCTTG ...........................::x.:....... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 30394173 NA +8259 chr4 + 190214555 41795447 41795446 41795748 302 TGGGTTGGTTGATCACCCTATTCTAACATCATTTATGACACCCAATTGGCCTAATGAAATTG-GCACACAAAAACTAACTTGTGAAGG--CAAACAACTTTCATAGAAATAATTTACTGAAACTGCAAGGGAATTCTCTGAGCCCTCACATTCGAGAGGCACAGAATCGAACAGATCATCCAAGCAGATTTCTTTAAATTGGTTGGAAGTGCACAGCTCTTGTTTCGGCATCAATAGATGTGTTCAGTTTCAACTAAGCAATTCACTAACTGCATT--GATTTTTAAGGCCAAGCTGAAGGTATTGA chr4 - 94230402 23906029 23906028 23906308 70324095 70324094 70324374 280 TGCGTCCATTGATAACCCCATT------------ATGATATCCAGGAGTCCTAATGCAATTGTGTCAAGGAAGATTTACTTGTTAAGGGGAAAACGACTTTCACATAAATAATTTACTACAACAGAAAAATAATCCTCTGTGCTATCATCCTTACATTGAAACTAATCGAATGGA-----------GTTATTTTTAAATTGCTTGGAAGTGTACTGCTCTCATTTCATTGTCAATAAATATGCCCAGTTTCAGCACTGCGCTTCACTCAGTGCATCTGAATCTTCAAG----AGGGGCAGGAATTGA ..x..:x:.....x....:...------------....:.:...:xx.x.......x.....-.:xx.x:..:.:.x......x....--x....:.......:.x............:x...x.x..::x...:.....x..:x...:x:.::x:xx.x.xxx.......::..-----------.x.x.:.........x.........:..x.....::....:x::......:..:..::........:.xxx..:x......x.x.....:--:..:..:...----..xx.x...x..... 22M12D28M1I25M2I85M11D90M2I10M4D15M 191/275 69.5% 280/94230402 0.0% 32/275 11.6% 17889418 NA +3563 chr4 + 190214555 41807709 41807708 41807791 83 CTCACTAGCTGTATGGCCTTTGACAAGTCACTCAATCTATAGAAGCCTCCGTTTCCCCATATGTAAAATCAGACTTATGACAC chr4 - 94230402 11947207 11947206 11947286 82283117 82283116 82283196 80 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGA---TTATAATAC .......:....:..:....x.::x.......:.....::xx:x.:.:.x..........:.:.:....x.---....:.:.. 71M3D9M 57/80 71.2% 80/94230402 0.0% 3/80 3.8% 29860502 NA +31901 chr4 + 190214555 41821918 41821917 41822729 812 AACTGCTGCCTCCTGTTTGGGCATTGCAGAAAACATTTGGATTGCTTTAGATGCCTTACCATGCTAATTAAATAAAAA-ATAACTAATTAAATGTCATAATGCATGATGTAAACTTGTTAATGTCAGGGGAGATTTTTAAAAACAACTATCAAGATAGGCAAATTTGTCACATGTCAACATTTTTAGTTAATCTTCAGTGGTGAATAAGTAAATTTTATTTAAGAAATTTGAAAACTGTCTGGCGATATGATTAGGGCATCCTATATTTTGTG-CCTGATTAGACTGTGGCTTATAAGGGGGGCTGGAGAGTCTCTTCTGA------ATAGTTAA------CTACCCATTTT------------TTCAATTAAGCATAATGTTATGTTAACATCCTTAAAGAGGTAAATGATGGCACGGTAAATCCAATTAGAATACAT-ACTACAACTGGATTCTCTTGCAATTTTCAAAAAGCTGATTGCATTTTACGTCTTCCCTGCTATTGTCAGAGTGGCTTTACCACAAGTTGCTGCACCCC-GCCTGGTGTCTGTGTCTCTGAGTGGTGACCTTTGCTGTAAGAGCTGCTGCAGACATCACCAACTCTCACATCAATTTGCTACAATTGGATGTGGCATCTTGCAGCTAATTTGATTTGGGAAGAAATGCACCTGGCTCTGTTTTTTCCCTATAGAATGTGGAGGGAGTTCTGAGTCCTCGCAGATGCCATCTAACCGAGGAGCCCATGTGTTTTTCAAGGTCTAAGCAGTTTGTCTTCATCTCCCCAAATACAGCCCATTACAAAGGGAGAGAAGCTGAATTATTTAACTCAAAAATCAATT chr4 - 94230402 23911434 23911433 23912222 70318181 70318180 70318969 789 AACTGCTGCTTTCCCACCATTTATTTAAGAAAATATTTGAATTGCTTTAGATGTCTTGTGAAGTTAATTGGATAAAATTAGGGATAATTAAGTGTCATAAAACATGATAGAAACTTGCTGATGTCAAGGGGGATGTTTAAAAGCAGTGACAACGACAGGTAGATTTGACATATGTCA---------GTAGATTTTCCAT------------AAGTTTCTGTAAGCTTTTCAAAGCTTCCCTGCCCATGCAATCCAGATTGATTGCGTTCTGGAACTTGATTA---------TTATAAA-------------CCCATTCTTATTTCTTACAGTTAAAAATATCTTCCAATCCTGTCCTGAAATGCCTCCGTCAAACACCATTTTATATTCACATTTTAAGAGATATAAACAACTG---GGCTGAATTAATTGAAATCTATCATTAAGAGTGTATTTTCCTATA----TTAAAAAATCGATTGCATTTTACATCTCTGATGCTTTTGTTAGAGCAGCCCCGCTGCAAGTTGCTGTATACCAGCCTGTTGTCTACGTCTCCGCACATTGACCTTTGTTGTAAGATCTGCTATAGACATCACAAACTCTCACATCAATTTACTACAATTGGATGTGGCATCTTCCAGCTAATTTGATTTAGGCAGAAATGCACCTGGCTCTGTTTTTTCCCTATAGAATGTTGAGGGAGTTCGGAGTCCTCCCAGATGCCATCTATCTGAGTAGCCCATGTGTTTTTCAAGGTCTAAGCAGTTTGTCTTCATCTACCAAAATACAAGCCACTACAATGGGAGAGTAACTACATT-TTTAATGCAGATATCTGTT .........:.:.:xx:::xx:...xx......:.....:.............:...::x.x.:.....::......x-.x::x.......:........x:......:x.......:.:......:...:...x.......:..::x.:x.x..:...:.:.....x..:......---------..x:..:...x:.------------..x...x.x....xxx..::..:x:.x:...x.x..:::..:x:.::xxx:.:::..:..x:-.:......---------......:-------------:.:x....x.------.:......------..x..x..::.------------:..x:.:..:..:x..x....:..x....::.x.:...x:....::.:x.---..:x:.x::....::...x:..-.:..x:.x..x...:..:.::.----.:.....:::.............:...::xx....x....:....::..::::.::..........:.:x..-.....x.....::.....:.x:::x.........:.......x.....::.........x.................:......................x...............:..x......................................x..........x........x.............x.:...x..........................................x..x.......:x...:.....x.......x.:..:x...-.....:x..:.x...x:.. 78M1I98M9D13M12D62M1I8M9D7M13D10M6I8M6I11M12I50M3D22M1I22M4D72M1I281M1D19M 561/761 73.7% 789/94230402 0.0% 79/761 10.4% 17910484 NA +3115 chr4 + 190214555 41832943 41832942 41832993 51 AAAGCAAAAAAACGAAAACAAAACAAAACAAAAAAAAAA-CAAAGTATGCCT chr4 - 94230402 71516695 71516694 71516746 22713657 22713656 22713708 52 AAGGCAAAAAAACAAAAACAAAACAAAACAAAAAAACCCTCAAAGTAGACCT ..:..........:......................xxx-.......x:... 39M1I12M 44/51 86.3% 52/94230402 0.0% 1/51 2.0% -29683752 -64546650 +3057 chr4 + 190214555 41834954 41834953 41835039 86 TCTCTAAAAAAACAAAACAAACAAACAAAAAGAGAAACTGATTTCTAAAGAT--TTTGTTGTTAGTTTAGTTGTTAAAATATTCAAAA chr4 - 94230402 43866302 43866301 43866389 50364014 50364013 50364101 88 TCTGTAAAAAAACAAAACAAACAAACAAAAAAAAACACTGGATACTGTATATGGTTTTTCAATCTTCTAATCATTTCCACATTCCAGA ...x...........................:.:.x....:x.x..:x.x..--...x.::x.xx.:..:.::..xxx.:....x.:. 52M2I34M 60/86 69.8% 88/94230402 0.0% 2/86 2.3% -2031348 -92199054 +9908 chr4 + 190214555 41835482 41835481 41835869 388 GCAGATGGTCTCGGCCTGGACATCTGGAAGTCTCATCAGATT--ATGGGGCACAAATTTGTGATAATAGATTTAATTCAGTTTTTACTTAACATTTTTTGGCTGGTTTAAAGACCCTGGGGTCAGTATGTAACTTGGCAAGAGTTTTACAAAAATTGTTCCGAATTTACCATCAATGGGCCGATCTTATACAATATTTTGTTTGTGCAACTCAGACCAGCTGGGTAAAAGCTAATGAAAGAAATGCAATTATAAGGGGGTGGGAGGTACATGTAAGGCTTATTAATGCATTAGTCATTCTCTGCAAACCCCT-CACCATCCCA-CTGTGCTGCTGCATCATGAGCACAAGATAACCTTG-------GGGGAACATGGCTG-TCTTCCTTTATCTTCTGAT chr4 - 94230402 23913920 23913919 23914297 70316106 70316105 70316483 378 GCATATGGTCCCGAC-TATACATCTGGAAGTTTCA---GGCTCGAGGGGGCTAATGTTTGTGATGGGTATTTTAAATTCATCTGTGCTGAATGCTGCCAGAAAGG----GAGTTATTCAGGTCTGAATGAAAGTTGGCAAGATATATGCCAAAGATGTTCAGAATTTTCT-TCTGTATAACAAGCTTATGAAATACCTT-TTTATGCAGCCAAGACCAGCTGGGTGAAAGTTAATCAGCCAAATGCAATTATAGGAGG------------TGTAAGTCTTATTAATGTATTAGGAATTCTCAGGGTACCAGTGGACCATTCCAGATGTGCTGCTGCATAATGAGAACAGTGTAACCTTGATCAAGAAGCCAATCTGCCTGATCTCCTCATCTCTTCTAAT ...x......:..:.-.:x............:...---.::.--.x.....xx.x:........::xx:x.....x.:x:.:.x.:..x..:::.x::x.:xx..----:..x:x:.x:....x.x...x..x.........xx.x.:.x...:x.....x......x.:-..x:.:x:x.:.x.....:x....::..-...:....:.:x.............:....:....x.:xx.............:.:..------------......x..........:.....xx......x.x:x...xx.-x.....:...-x.............x.....x...:x:........-------:.xx..:x..x...-...:.::x.x......:.. 15M1D19M3D4M2I61M4D61M1D28M1D58M12D42M1I10M1I35M7I14M1I19M 254/366 69.4% 378/94230402 0.0% 34/366 9.3% 17921562 NA +3260 chr4 + 190214555 41842086 41842085 41842159 74 CATTGTTTTCTTCTTCATCTTTACCTCCTCATTTTCTTCCTCCTCCTCATCCTCTTCATCT------------TCCTCCTCTTCCT chr4 - 94230402 9817012 9817011 9817097 84413306 84413305 84413391 86 CATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCTGGACTCCGTGGATCTACCTCTCCCT ....x:.....:.:...:...:..x:..x.......x:.............x:...:x:..------------..:x.....:... 61M12I13M 55/74 74.3% 86/94230402 0.0% 12/74 16.2% 32025074 NA +3135 chr4 + 190214555 41842104 41842103 41842158 55 CTTTACCTCCTCATTTTCTTCCTCCTCCTCATCCTCTTCATCTTCCTCCTCTTCC chr4 - 94230402 32546814 32546813 32546868 61683535 61683534 61683589 55 CCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTTC .:..x.:..:.:........:..::...x......:..:..:...:....:..:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 9295290 NA +3139 chr4 + 190214555 41842279 41842278 41842329 51 TTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACTGAGTCTT chr4 - 94230402 7632211 7632210 7632261 86598142 86598141 86598192 51 TTTTCTTTCTCTCCTTTTTTTTTTTCTTTTCTCCATTTAAAACTGGATCCT ..........:..:...........:....:.::x...:.:....::..:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 34210068 NA +3191 chr4 + 190214555 41849010 41849009 41849141 132 CATTCTGTTCTTTTTATTTTATTTTATA---------TATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT--------------TTTGAGACAGGGTCTTACTCTGTCACC chr4 - 94230402 71862987 71862986 71863141 22367262 22367261 22367416 155 CATTTAACTTTTCATGTTCCCATTTATAAAATTGTTGTAAATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCTGCTGGAGATTGTTTAGATTTAAAACATTTTCTTCCCCAGTCTCC ....:x::.:..:x.:..::xx......---------..x....x...x.:x.x..:x....x....:.:x.:x.x...:....:.x...:.x................:.x:.--------------...:.:...xxx....x.:.x...x.. 28M9I77M14I27M 88/132 66.7% 155/94230402 0.0% 23/132 17.4% -30013977 -64216425 +3264 chr4 + 190214555 41849011 41849010 41849099 89 ATTCTGTTCTT---TTTATTTTATTTTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757823 42757822 42757913 51472490 51472489 51472580 91 ATTTTGTTTTTGAACTTCTTTCACTTTTCCT-CATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ...:....:..---:..x...:.:...x:x.-:....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 11M3I17M1D60M 63/88 71.6% 91/94230402 0.0% 4/88 4.5% -908812 -93321590 +3132 chr4 + 190214555 41849019 41849018 41849121 103 CTTTTTATTTTATTTTATATA---------TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 71862994 71862993 71863105 22367298 22367297 22367409 112 CTTTTCATGTTCCCATTTATAAAATTGTTGTAAATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCTGCTGGAGA .....:..x..x::x.x....---------..x....x...x.:x.x..:x....x....:.:x.:x.x..x:....:.x...:.x................:.x:.x.... 21M9I82M 71/103 68.9% 112/94230402 0.0% 9/103 8.7% -30013975 -64216427 +3092 chr4 + 190214555 41849025 41849024 41849115 91 ATTTTATTTTATATATATA------------TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681901 56681900 56682003 37548400 37548399 37548502 103 ATGTAAATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ..x.x.x..........:.------------....xx.x.x:......x:.:....x:.:...:....x.xxx.......x...x...x....x......... 19M12I72M 67/91 73.6% 103/94230402 0.0% 12/91 13.2% -14832876 -79397526 +3596 chr4 + 190214555 41849029 41849028 41849111 83 TATTTTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681921 56681920 56682003 37548400 37548399 37548482 83 TGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .:....x:.:.....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x....x......... 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% -14832892 -79397510 +3176 chr4 + 190214555 41849030 41849029 41849113 84 ATTTTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681920 56681919 56682003 37548400 37548399 37548483 84 ATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ..x..x.x:.:.....xx.x.x:......x:.:....x:.:...:....:.xxx.......x...x...x....x......... 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% -14832890 -79397512 +3023 chr4 + 190214555 41849033 41849032 41849109 77 TTATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 71863021 71863020 71863097 22367306 22367305 22367382 77 TTGTAAATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCT ..:..x....x...x.:x.x..:x....x....:.:x.:x.x...:x...:.x...:.x................:. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -30013988 -64216414 +3305 chr4 + 190214555 41849041 41849040 41849094 54 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 33167111 NA +3388 chr4 + 190214555 41849043 41849042 41849096 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 33167113 NA +3068 chr4 + 190214555 41849044 41849043 41849099 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -50886304 -43344098 +3258 chr4 + 190214555 41849048 41849047 41849112 65 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 36983594 NA +3496 chr4 + 190214555 41849048 41849047 41849103 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -50886300 -43344102 +3044 chr4 + 190214555 41849050 41849049 41849114 65 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.xxx.:.........x..x....x..........:. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 36983596 NA +3068 chr4 + 190214555 41849052 41849051 41849107 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -50886296 -43344106 +120656 chr4 + 190214555 41856034 41856033 41858057 2024 TTTTATTGAACCATGTGATACAGTGGTTCGAATTGTTTTTATTTCAAGCACAGAATCTGTATTAAAAATAACACAGTTTCCTGTCCTTCTTTCTGTATTTTCTCCTAGCACAAGGGAAAAATCACATTCCCTAATATATTTTCTGGGCACACTCTGTTTGTAATATTTCCTTTGCAAACGTCCTGTTCATATTTGTATCTTATTACTTTTCTTATACTGGATTTATTGATAGTTTCTAACAAAAATATGATTTCAGTATATTTACTGAACAAAATTCAATATAACAGACCCCAATTCAATTTTTTTCATCAAAATGGAGAACAATAAAGAGGCTAAAGTCCTCAGTTTAGACACACAGCATCAAAAAAACTTATATTGTTTAAAGAAATAACTCAATAAGGGGGAAGTGATAGATATTACTTAAAGAACAACATTAGCTTTGTTTATT-TATCTATGTTTCTAATATTCCTGCCTCTAACTTAGTCAGCGACAAACATTTTTGGTGTTCCTTGGTTATTGAATCTCACATAAATGCAGTCATTTTCTAAAAATAGAAAAATATTGTTATTATGCATTGCAAGATACCCATGGTTCATATTTACTGTTAATTGTCATTTCATGTA--TTCAAATTTAATTTA-----AGGGAATTTTTAAAAAACTTAGTCTGTTTCCCAGATTATTTTGCTATTGTGCCAGTATTTTTTATAAATTAATCACGTTTATGCTTTTGC-TTGTTTACAAAGAGTGTGTATTCTGAATTTCTAATGTCCTGCTCTTGAAG------------ACTGATTACAGAGGGC----------TTTCTTCATTGACCATTAGGTAAAGGGTTGAAAAATAACTTTGGTTTACAATAGATTTGTAGTTTAATGGATGGGTGTATTCATTATTTACCTGTTCTCAGTCTCTTGTGTACCGCCTAGTGATGATTATAGTTGTTTTAAAGATGATCCTTATTTATGGTCTATTGCATCATCCTGAGATTTAGTAATGATTTTAGATTTTCCACCTAAATTACAGGGCACTTTCCGCTGAAAATGGTAAACAATATTACAAACTAAAAAAAAAGAAGTAATCTGATTTCTGGGAAGAGGGAGCCCAGTGAAAGATGTGTGCTTTTATAAGGATGGACAATGGAAAGCAAAATAATAACTCCTAACTTTGATTGTTCAAATATATTCTGCAATACAGAGAGCTGCATGCAGGCTGGAGCAGGCATGGGGCAGGAAGGTTAAGTAGAAGAGAAGGCACAATACTTCAGATTGGCAGTAGACTGCAGCAAGAATAATCTAATCAAAACGAAATTAAATTATCTAGTCCCAGGGCAGGCTCCTGGGACTGCTGCATTGAATGCTAGCAGAGCTCCTCCTAGACATTTTTCTCCAGTCAAACTCACATGATGAATGCAGATGAAAATTGAAATATGAAAATCTGAAATAATTTATGGAAGTTGTCAGAAATTTGGCTTGCTTGTGGTGTAATTTCCTCTGAGACGAGGCAGGCCGGCTCACTGCTGCAAGACTTGGAGCGGCTGCTGGCCTTCCAGTGGATGGATCAACCCCTTTAAAATGCTCTTCCAGACAAATTACAGCTCATTACACACAGCCTTGCACCATGCCATTATGTCAGAGGAAATCTTTTTTCATTTGCACAAATTTGCTTGGAATTCTCATATTTATTTGAGCATCCATTATCGAATCTGAACATTGAATTATCCACAATTATTTTCTGGGTACGCGGATGTTTGTGTATATGGAATAGATGGTGACTGCGGGGCTATAAAAATATTACAGTGTGGCTGAAAACCCCACGTACTTT--GCAGCTGTG-TTACAAAGAGCATTG---TTTGGCTGTTGAAAGAGAATTGACTTTTGCAAGGACA---TTTTACAAGGTTCATTTTCTTTTTGAA------CATACTCCGAAGGAGACTAACTCTGCTTCTAGTGACTTTTTCTGTGCTCCATGGTGTATAAGAATTACAAATTGTTTGTTACAACTGAGTTAAGATCCTCTTTCCTCTCCCTATGTAATTTGTTTGT chr4 - 94230402 23919778 23919777 23921771 70308632 70308631 70310625 1994 TTTTCTTGAATGTTACAACGCAGCAGTTAAAGTCATCTG-ATTTCATGTGTTATATCTGTATTAAAAATAACAGAGTTCCCTGTAATTCCTTCTGTATTTTCCTCAAACACAGGGGAGAAAACACATTCCCTAATATGTTTTATGGGCACACTCTCTTTGTAATATTTCCTTTGCAAAGGTCCTGCTCATATTTGTATCTTATTACTTTTCTTATACTGGATTTATTGATAGTTTCTAACAAAAATATGATTTCAGTATATTTACGGAACAAAACTCAATATAACGGTCCCCGATTCAATTGTTTTCATCAAAATGGAGAACAATAAAGAATCTAAAGTCTTCAGTTCAGACACATAGCATCAAAAACCCCTATATTGTTAAAAGAAATAACTCAATAACAGGGAAGTGATAGATATTACTTAAAGAACAGCATTAGCTTTGTTTACCCTATCTGTGTTTCTAATAATCCCGGCTACAACTTGAAGAGTTACAAATATTTT------------GCTCCTGAAACATGTATAAATTCAGTCACCTCCTGTAAATGGGGAAAAATAACGCCCATACGTTAAGAAAAATTTATTGCATATTGTTACAGCTAGTGGGAATGTTATATACATTCAGATGCATTTCACATGAAGGGGATTTTTG---------------TTC-----TTGTTCTGCCACACTTCC-------TCCATAAATGCACTTTGTTTGGGTGGTTGCATTTTTTGGTAAGGGTTCATGTTCTGCAATTCTAATGGCTTACATTCAGAGCAACATTGTGGAGCCGGTT-CAGGGGGCGTTTTGTTTGTTTTTCTATTGACCACTAGCTAAAGATTTGATTAATAACTTTGGCTAACAATAGATTTTTAGTTAAATGGATGGATGAATTCATTATTTACCTGTTCTTATCCTCGTGTGTATTGCCCAATGATGATTATAGCTGTTTTAGAAATGATCCTCATTTATGGTATGTTGCATCATCCGGAGAAGTAGTAATGATTTTAGATTTTCCACCTAAATTACAGGGCACTTTCCACTGAAAATGGTAAACAATATTACAAACTTAAAAAAAAGAAGTAATCTGATTTCAGGGAAGAGGGAACCCAGTGAAAGATGTGTGCTTTTATAAGGATGGACAATGGAAAGCAAAATAATAACTCCTAAGTTTGATTGTTCAAATATATTCTGCAATACAGAGAGCTGCATGCAGGCTGGAGCAGGCATGGGGCAGGAAGGTTAAGTAGAAGAGAAGGCACAATACTTCAGATTGGCAGTAGACTGCAGCAAGAATAATCTAATCAAAACTAAATTAAATTATCTAGTCCCAGGGCAGGCTCCTGGGACTGCTGCACTGAATGCTAGCAGAGCTCCTCCTAGACATTTTTCCCCAGTCAAACTCACATGATGAATGCAGATGAAATTTGAAATATGAAAATCTGAAATAATTTATGGAAGTTGTCAGAAATTTGGCCTGCTTGTGGTGTAATTTCCTCTGAGACGAGGCAGGCTGGCTCATTGCTTCTAGTCTCAGAGCAGTTGCTGGTCTTCCAGTGGATGGATCAACCCCTTTAAAATGCTCTTCCAGACAAATTACAGCTCATTACAGACAGCCTTGCACCATGCCATTATGTCAGAGGAAATCTTTTTTCATTTGCACAAATTTGCTTGGAATTCTCATATTTATTTGAGCATCCATTATCGAATCTGAACATTGAATTATCCACAATTATTTTCTGGGTAGGCGGATGTTTGTGCATATGGAATAGATAGTGACTGTGTAGATATAAAAATATTATAGCATTGCTGAAAACCCTTCGTATTTCAAACAACCGCATTTATATAGAGACTTGCCATGTATCTATAGAAAGGCTATTTCCT-----GAAGTCGCTCTTTTATGCAATGCATTTGTTGTCCGAAAGGAGTCATCCACAGAAAGCCGCTCACT----TCCCAGTGACTCAGAGTCTGCTCTCTG-------------------TAGTTATCACAA-----TTAGGA--CTTCTGTCTGTGCATATGTAATTTGTGTAT ....x.....:xx.:::.::...::...x:.:.::.:.x-......x.:::x:x...................x....:.....xx...:............::.x.:....:....:...x...............:....x............x......................x......:...............................................................................x........:..........:.x....:........x............................:x........:......:.......:...........xx.:.........x..................x:.............................:...............::-.....:...........x...:.x..x:.....::xx..:x.....:.....------------.:.x:....x.x:::......x......::.:..:x....:.::...x..x::xx::..:.:..:x:.:.x.:::..x.:x:..xx....x.:..:.x.xx..x.:..:..--....:..x:.x..:.-----....:......:---------------...-----..:..:...:.:xx.x..-------.::......xx.::x:....:x.:xx....-..x...:xx...:..x::.:.....x.x........x.:.:.x:.:::..------------:.:.:..-...:....----------...:.::........:...x.....:x....xx...........:.x...........x.....x.........:..x....................:.x:...x......::...:.:............:.......:.:........:.........x.:...........x....xx.............................................:............................x........................x...........:..............................................................x............................................................................................................................................x.............................................:..................................:.................................x..................................................:....................................:......:....x.x..x..::....:.:......:.............................................................x......................................................................................................................................x.............:.............:.......:.x:.x.............:..::.x...........:x....:..:--:..:.:.::-...:.x....xx...---.x.:x..:.x.....:xx...xx..-----:.:.x.:---.....::x::.x.....x:.x.::...------...x.x.x...:.xx:..x...----.:.:.......:xxxx.x.....:x..-------------------.:x..:.:....-----...:..--..::.x:..x.x.x............x.:. 39M1D408M1I52M12D111M2I15M5I12M15D3M5D18M7D30M1I50M12I7M1D8M10I1015M2I9M1I15M3I25M5D7M3I27M6I22M4D27M19D12M5D6M2D30M 1639/1948 84.1% 1994/94230402 0.0% 122/1948 6.3% 17936256 NA +24239 chr4 + 190214555 41858983 41858982 41859376 394 GCGGGGTTGGAACATATCGCCACCTCCCCAGCTTCTCCTTGCTGCAGGAAACTTTGTAACAGCACTCAAACAAATAAAGAAACTGGGTTGGAGATTATTGCTTTCATTGTGCTATTGTACATGTGTATTATATAGTCACTCCATAGTTTGACACAATCAGCTGAATGTGGGACAAGACAAATGTTGTATATGACAGTGGGGTAGTATTGAAAGATGACCCCATATCTACAGGGCTAAGAGTTATGGATGCATTGATAGCTGCTACTAACATTTTGAAGCGTGGCTGTTAAATTTTGCCTGCTGGCTTCTGGCTGGAGGCCGGCCTGCCTGGGCAACGGAGCCATTGAAAGGAACTGCAGGCAGCT------TTTTTTCAGTACACATCAA-GGAACTCTGC chr4 - 94230402 23924367 23924366 23924762 70305641 70305640 70306036 396 GCATGGCTGGAGTGCGCTGTAGCCTCCC-AGCTTCTCTTTGCTGCAGGAAACTTTGTAATAGCACTTAAATAAATAAAGAAACTGGGTAGGAGATTATTGCTTTCATTGTGCTATTGTATATGTGTATTATAGAGTCACCCCACAGATTGACACCAGTAGTTGAAAGCGGGACAAGACAAATGTTGTATATGACAGTGGGGTAGTATTGAAAGATGACCCCATATCTGCAGAGCT-GGAGTTATGGATCCATTGATGGCTGTTAGCAGCA-CTTGAAGCGTGGCTGTTAGGTTTTGCCTGCTGGCTGCTGGCTGCTGGCCTGCCTGCCTGGGCAAC--CGCAGCTGAATGGAGCGGCAGGGGCCTCGGCACTTTGTTCTCCCCACAGCAACGGAGCTCTGC ..:x..:....:::::::.:x:......-........:.....................:......:...:.................x..............................:............x......:...:..x.......x.x:..:....x.:...........................................................:...:...-:...........x.......:....:..x:.:..-:.................::...............x.......xx....x...............--x..x::....x...:.x.....x:x..------...x...xx:x....x...-...:...... 28M1D206M1D34M1D65M2D27M6I19M1I10M 327/389 84.1% 396/94230402 0.0% 12/389 3.1% 17934616 NA +18747 chr4 + 190214555 41863794 41863793 41864128 335 CCTTTCACCCTCCCCACTTCCTCTGCAGCCCTCCCCTGCTCTCTGCGGCTGGTGGCTTAGTGCATGAACTGATTAGGTAACAACAGAGCACCTTCCCTCCCTGTTTCCTCCCAATGCATTTGGGCCACAGCTTTTGAAGGCGCCCAGCCCTGCCACTATCCCGCCTTTATCACAGGCTGTATGGGGCTTTATCTGGAAAAGCCTGGGCTTTGCCCCTGGCTTCATCAATCATTTGGACCAGTTCACATCTCCTTCATGGTGTTCCGCCTCATTAAACCCATCAA-GGGCACTGCAGAGAGGCTGTGGGGCCCAGGAATGCCTCCCCATTGCAGGCG chr4 - 94230402 23928332 23928331 23928664 70301739 70301738 70302071 333 CCCGTCACCCGCCCCGCTCCCTCCG-AGCGCTCCCCGGCCCG--GCGGCTGGTGGCTCAGTGCTGGTGCTGATTAGGTAACAACAGAGCACCTTCCCCGCCTGCCCTCCCTCAATGCGCTCGGGCCACGGCTTTTGAAGGAGCCCAGCCCCGCCACTATCCGGCCATTATGAGGAGATGTATGGGGCTTTATCCGGAAAAAGCTCAGCCTTGCCCCAAGCTTCATCAATCATTTAGACCGGTTCAAATCCCCTTCATCGCGTTCCGCCTCATTAAACCTATCAAGGGGGACTGTATATAGTTTGTATAGGTCCAGAATGCCTGTATTTTGGCGGCG ..:x......x....:..:....:.-...x......x..:.x--.............:.....xx.x:.............................:x....::::.:.:......::.:.......:...........x.........:..........x...x....x.x::.x................:......:x..x:..:.......x:................:....:.....x...:.......x.:..................:.....-...x....:.x.x..x:...:x:.x:.x:........x:x:x...xx.... 25M1D16M2D240M1I51M 261/332 78.6% 333/94230402 0.0% 4/332 1.2% 17935462 NA +3099 chr4 + 190214555 41868587 41868586 41868687 101 ACAAGTACCAAATATATATATATACATATATATACATATATATACACATATATATACATATATACACACATATATACATATATACACATATATACATATAT chr4 - 94230402 27943528 27943527 27943626 66286777 66286776 66286875 99 ACAAATA--AAATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGT ....:..--.....x::...:.:xx:.:..:.:.:::.:.x:.:::..x....::....:...:::.x.......x..x..:.x......:..x..:.::. 7M2D92M 61/99 61.6% 99/94230402 0.0% 2/99 2.0% 13925059 NA +3652 chr4 + 190214555 41868625 41868624 41868728 104 TATATACACATATATATACATATATACACACATATATACATATATACACATATATACA----TATATACACATATATATACATATATACACATATATACATATATACA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::.::.....x:.....:.........x.x::..:x:..:....::...x:....----.....:::x:..:.....x...:::x....x.x.:...:..:..:. 58M4I46M 67/104 64.4% 108/94230402 0.0% 4/104 3.8% -31252477 -62977925 +3149 chr4 + 190214555 41868660 41868659 41868743 84 ATACATATATACACATATATACATATATACACATATATATACATATATACACATATATACATATATACACATATATACATATAT chr4 - 94230402 27943543 27943542 27943626 66286777 66286776 66286860 84 ATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGT .....:xx:.::...:..::...x:.:.:..x....::.:.::...:.:.x.......x..x..:.x......:..x..:.::. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 13925117 NA +3496 chr4 + 190214555 41868681 41868680 41868794 114 CATATATACACATATATATACATATATACACATATATACATATATACACATATATACATATATACACATATACATATATACATATATATATACATATACATATATACATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACAC----AGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:.::.::.....x:.....:........----.x.x::..:x::.....::..:.x:..:..:x:....::.:x:........x...::.x:.:.x.x.:.:....:.... 31M4D79M 68/110 61.8% 110/94230402 0.0% 4/110 3.6% -31252419 -62977983 +3616 chr4 + 190214555 41868690 41868689 41868823 134 ACATATATATACATATATAC---ACATATATACATATATACACATATATACAT--ATATACACATATACATATATACATATATATATACATATACATATATACATATATACATATACA-CATATATATACACATATATAC chr4 - 94230402 4417318 4417317 4417457 89812946 89812945 89813085 140 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ....::x.:.x....x.x..---.x..x..x.............:.:.:...x--.:....:...:x:x:.x.::....:...xx.x:...x..x.....:......x..:x....::-..:.x.:.:xx.......x.. 20M3I30M2I63M1I21M 90/134 67.2% 140/94230402 0.0% 6/134 4.5% 37451372 NA +3128 chr4 + 190214555 41868742 41868741 41868819 78 ATACACATATACATATATACATATATATATACATATACATATATACATATATACATATACACATATATATACACATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:::::...:::.::...x.:..:...x.......::..::x.....xx.....:.:.....:.:.:.x.....x.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 33472954 NA +3950 chr4 + 190214555 41868755 41868754 41868865 111 TATATACATATATATATACATATACATATATACATATATACATATACACATATATATACACATATAT--ACACATATATATACACATATATATACACACATATATATACACAT chr4 - 94230402 73121104 73121103 73121216 21109187 21109186 21109299 113 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .::..:.....x:...:.........:.x.x:...:x:......:::.:.x:..:.::x::....:.--::.......x....:.x:.:.x.x........:....x:..x.. 67M2I44M 72/111 64.9% 113/94230402 0.0% 2/111 1.8% -31252349 -62978053 +3608 chr4 + 190214555 41868767 41868766 41868967 201 TATATACATATACATATATACATATATACATATACACATATATATACACATATATACACATATATATACACATATATATACACACATATATATACACATATATATATACACATATATATACACAT---ATATATATACACATATA---------------TATATATACACACACACACACACAAGCCTCAAATTTTTAAGT---------AGGAATCAAATAAACAG chr4 - 94230402 4417317 4417316 4417536 89812867 89812866 89813086 220 TACATGCCTGTTCATAAAAACTTG---AGATTTAGACATATATACACACACA----CACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACA-ACACACAGAAATCTTGACAGCTTGATTACCAGTATAAGAAATCAACTGAACAG ..:..:.x.:.x....x.x..x.:---.x..x..x.........:.....:.----....x:x.:....:...:x:x:.x::.....:...xx.x:...x..x............x...x:.:..---.:.x.:.:xx.......---------------:..::x.::::...-.......x..::..::.xxx:..:.x.---------..:......x.:..... 24M3D25M4D69M3I17M15I14M1D27M9I17M 127/193 65.8% 220/94230402 0.0% 35/193 18.1% 37451450 NA +3084 chr4 + 190214555 41868802 41868801 41868864 63 ACATATATATACACATATATACACATATATATACACATATATATACACACATATATATACACA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x.........:..:.:x.:::x.:....x......::.....:.:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 24348053 NA +3066 chr4 + 190214555 41868820 41868819 41868880 61 ATACACATATATATACACATATATATACACACATATATATACACATATATATATACACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .....x..::...:.x.::......:....:...:....:.x.......:x..::...::. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 34272407 NA +3874 chr4 + 190214555 41868830 41868829 41868932 103 ATATACACATATATATACACACATATA----TATACACATATATATATACACATATATATACACATATATATATACACATATATATATATA---CACACACACACACACA chr4 - 94230402 4417343 4417342 4417452 89812951 89812950 89813060 110 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATA ..x..x.........:.......:.:.----:....:...:x:x:.x.:.....:...xx.x:...x..x............x...x....---....x....xx...:. 27M4I60M3I16M 76/103 73.8% 110/94230402 0.0% 7/103 6.8% 37451487 NA +3203 chr4 + 190214555 41868861 41868860 41868930 70 CACATATATATATACACATATATATACACATATATATATACACATATATATATATACACACACACACACA chr4 - 94230402 8395787 8395786 8395856 85834547 85834546 85834616 70 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ..::.:.:...:.:::....x.:..::.:x..:....:..::.x..:..xx...:............... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 33473074 NA +3040 chr4 + 190214555 41868865 41868864 41868932 68 TATATATATACACATATATATACACATATATATATACACATATATATATATACACACACACACACACA chr4 - 94230402 8395793 8395792 8395860 85834543 85834542 85834610 68 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .:...:.:.:..:.x.:..:..:x:.:....:...:.x:.:..xx...:.:.............x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 33473072 NA +3137 chr4 + 190214555 41870686 41870685 41870781 96 TCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTGGTTTTTTGTTGTTTGTTTGTTTCTGGTGGATATGGGAAACAAAATTAAAGAAAGCA chr4 - 94230402 76795314 76795313 76795401 17435002 17435001 17435089 88 TTTTTTCTTTTCCCTGTAACTTTCATCTTTGTTTCTGTTCTTTTGCTGTTGTTTGTTTGTTTCTGGTAAAAGTTG--------ATCAAAATAAGCA .:...::..:.::..x.xx:..::x.....x.....x..xx...x:.....................::.x:.x.--------..:...:x..... 75M8D13M 61/88 69.3% 88/94230402 0.0% 8/88 9.1% -34924628 -59305774 +55637 chr4 + 190214555 41872849 41872848 41874216 1368 CTTAGCAACTCCATGGGGAAAAAGGTCAGGCTACTATTGACAAGTATGTAAAGACACCTCCTAAACCATGGGAAAACATGTAGAAATCGTTTCGACTCACTGCATTCAGAACCCATGGAAGGGAATCACAAAACTGCACTT-TGGCATTGTTGGCCTGAAAGGATATCTATTTATCATCTTATAAGACAGCTCGAATGATCTTTATCTACTTTGCCCACTTTCTGACCCAAATTCAGGGTTTTTATGGAAAATTGCAGTCAGTTTGATTGATGAAATCCAAAGATGTCTAAAATGGCACCAAAGATCTCCAACTGTGCAGACTCCAACCGAGGACTTCAATGTTGGCATTGTTCCTGAAGGAATAAAAAAAAAGAAAAAGAAAATGTTGAGAAAAACAGGCAAAAGTTAGGGAATTTCTGCTTTAAAAACTTCAAATTTCAATGAAGATCCCCAAACCCATTATCCCTGTTCACACGTGCGAACTGGGAGGACATCAAAGTATTTCCCACACATCG--------CAACAAAACCGGGTTCCTCTTGAAC----CAACAAACCTTTTTTGTAACCGGCTGAATGGCTGTATCTACGGAGCCA---------GTAGGTTGCGGAAAGGCGTTCGCAGGGTGGA-GGAGCGGGTAGTTGGGGAACCGGGCGCGCCTGATGGGGCGCAGGAAGGAAAA--ACTGATCGACGCAATGGCCCCCGCCACCG-------------------GCCATTTGGGGCTTTCAAAC--------GCCCTAA-CGAGGAGTCCGAGCGGCCACTGA------------AAGCCTCCCTGTTCCTGGGCAGGGCAGCCAGA---------------GTGCCCTCCCCTCTCCCTTCCCAGCCTCCCGGCGGCGCCACCATT-AACCCGGAGCCAGACCCAGGCGGAGGCCCCGGCGCCGAGGCCCGCGGAAGCAAGAGACAGCCCTGATAGTCTTCTAAACCCGGTCCAGTTTCG-----------AGGACGACGCATTATAGTGGAATATTGTCACCTGCCTAATTGTTCTAAGCGGGCCTCTGCCCCTCCCCCATTAGTAATAATAGCTTAAACGC-TCTTCCTCCCCGGTTACC-AGGCCCAGGAGCTGATGAATGAACCCCCTCGTAGGGGAAAATCTTGGGAGCTGTCTTCTGTCCTATTACCCAAGGGGGCCGACTATAAATCTTCCTTCATTTTAACCACATTTACCCTCATCCTCCTCCAGGCTAGGGATGCTGCGTTAAGATTGCACTGATGTGCCAACGCTCTGGACCAGCTGCTCCTAAATACAGACAGGTCCTTGTCAATTAAGGCTTTGAGAAGCAGGTCCTCGGGCCCTGGGGCATTGGAGCAGCCAGCAGCGTGCAGCCCCCACAATTAGTATCCATTTGGAAGGGACCTTCAGGGCACAAATGCACAGGCAAAGGAAGAA chr4 - 94230402 23931907 23931906 23933275 70297128 70297127 70298496 1369 CTTCGTAGCTCGGTGGGGAAAAAGGTCACGTTGCCATTGACAAGTATGTAAAGACATCTTCCAA-CCATGGGAAAACATGTATAAATTGTTTCGACTCACTGCATTCAAAACCAATGGAAGTGAATTACAAAACTGCACTTCTCGCATTGTTGGACTGAAAGGATATCTATTTATCATCTTATAAGACAGCTCGAGCGATCTTTATCTGCTTTGCCCACTTTCTGACCCAAATTCAGGGTTTTTATGGAAAATTGCAGTCAGTTTGATTGATGAAATCCAAAGATGTCTAAAATGGCACCAAAGATCTCCAACTGTGCAGACTCCAACCGAGGGCTTCAATGTTGGCATTGTTCCT------ACGAAAAAA--------------GTCGAG-AAAACGAGCAAAAGTTAGGGAATTCCTG-TTAAAAAACTTCAAATTTCAATGAGCATCCCC-AACCCATTATCCCTATTCATG-GGGCGAACTGTGTGACCATAAAAGTATTTCCCACACGCTGCAAAACAACAACAAAACCCCCTCCGCTTTAAGCCGTGCAATAAACCTTCTTTGTACGACGCTGAATAAC--CCTCTGCGGAAACAAACCCGGGCGCTGCCCTCGGAGATGCG--CGGAGTGCGGAGGGAACGGGGAGAGCACGGACCGA--GTGCTTGGAGAGATGGAGGACGTACGCCTACATACGTGCGCGTGTGCGTACGTCTACGCATACACATACACGTGAAATCTGTTCCGTGCGTCCGAAAACGAGTCGGCCTTAATTTAGAACTCGGAGCTGCAATGGAGGTGGTTTAATGGAGATTTAATTTTTCCGAGGACCAAAGCTGGATGTCGGAGGGGTTCGGTTCGGTCCGGTCCGGCCTTCCCGCATCCC--CTGCGCGGGTGCTGAGCGCGGTGCCCGGCCCTGTCCG----------GCCGCTGCTCGC---------------------------------TCTGATCCGGCTGCGTGCTCTCTGCCGGGGCCGCGCATTATTGCGGAACACTGTCACCTGCCTAATTGTTCTAAATGG--------CCACCTCCTATTATTAATAATAGCTGGAACGTGGCTCCCAGCCACGTTACCAAGGCCGGGGAGCTGATGAATGAAACCCCTACCA-GGGAAAATCTTGGTGGCTGTCTTCTGTCGCGTTACCCGAGGGGGCCGACCATAAATCTTCCTTCATTTTAACCACGTTTACCCTCACCCTCCTCCGGGCTAGGGCTGCTGCGCTCAGATTGCGCCGATGTGCCAGCGCCCCGCACCAGCTGCTCCTAACGACGGCCCCGTCGCTGTCAATTAAGGCGCTGAGGAGCGGGGCCGGCGGCTCTGGGGCAATCG------CGGCAGC--GCGGCCCCGGCAATTAGCATCCATTTCCAAGGGGCGTCGAGGTGAACATCGGGCAGGGATCGGAGGAA ...x.:.:...x:...............x.:.:.:.....................:..:.:..-.................x....:....................:....x.......x....:..............-.x..........x........................................::...........:............................................................................................................................:......................------.::......--------------..:...-.....::.................:...-..x.....................:x......-..............:....::-.x........x.x.:x...x................:::.--------..........xxx.:.x::..:.:.----...:.......:......xxxx.......::.--:x...:....:x..---------.:x.x::x....:.x...--..x..x.:...-...:....x..xxx:x.:....:--.:..:..:x.:.::.x....x.x.x:x--..xx.:xx:...:xxx..x:x..:.xx..-------------------x.::..:x.x..x.:.:..x--------...:...-:x..:.x..x....x..x.:x..------------:..x:.:xx.x..:.:.:.x.xx:x...::..---------------..x.xx...xx..:xx.:.:..x..x....--.x....x:x:::.-.:.x...x...x.:...x.x.x.----------....xx..:...---------------------------------:.:.:...:.:.x..-----------:..:.x:........x.:....:.:.......................::..--------..x:.:..:....x...........x:....:-x..:..xx..xx......-.....x:................x.....xx:.-.............x:.............x::......:...........:.........................:..........:........:........x.......:.x.......:.:.........:...:.:.x...............xx..:.x.xx...x:.............x:....:...:..x..xxx...:........x.x.------.:.....--..:.....x:.......:........xx.....:.x.:x...xx.xx.x:.x:....x.xx...:... 64M1D76M1I214M6D9M14D6M1D28M1D32M1D21M1D40M8I25M4I32M2D14M9I18M2D11M1I23M2D27M2I29M19I20M8I7M1I23M12I32M15I30M2D13M1I23M10D12M33D15M11I52M8D32M1I18M1I33M1D221M6D7M2D68M 995/1275 78.0% 1369/94230402 0.0% 187/1275 14.7% 17940942 NA +3063 chr4 + 190214555 41876510 41876509 41876554 45 ATTTTCTGTTTTGTTTGTTTGTTTGTTGTTTTGTTTTCTTTCTTT chr4 - 94230402 42074062 42074061 42074106 52156297 52156296 52156341 45 ATTTTCTGTTTTCTTTGTTTGCTTTTTGTTTTGGTTTGTTTTTTT ............x........:..x........x...x...:... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -197552 -94032850 +40360 chr4 + 190214555 41878291 41878290 41879742 1452 GTCCATCCTGGCGG-GACAGTAATTGCCCCGGGTCTGACACGACGCCGGGGGCTCAGGGCGCCTCCATCCATCTCCATCCAGTTAGCGACGCGCCCCCCGACCGGGCGGGTGGCCGGGCTTGGGCCTCAGCTCCGAATAATGAGAACAATTGTCTCCCCGCCTGGCATAGCCCTCCGCCGCTCCTCCGGGTTCGCTGCCCCTCTCATTTCTCTAGCCCTGCTTGTTTCCCAACCTTGGCGATGGGGATCGGGTGGGAGGT-CAGCTCCAGATCCAGTGGCCCTGAGCTCAGAG-AGC--AGCGAAGTCAGGGTGCCCCGGGAGGAGATCAAAGCCTCGGCCCCCACTGCCCTCCGCTCTGCCTCTGCCAGCGACTAACTTACCTCTTTTTCCACCTGCC--CAGCGAATCCAGCTGCCCGGCCTTCCCCTCCCATCCAAGAACCCCCGGCTCCTGCCTCTAGAATTTTCCACCAGCGCTGGGGGCTGGTAAAGATTCTGCCCCCCTCTGACAATTTAATAGTCCCAAGTCATCATCTGCGTGACACTGGCCATCCATCTTCTCCCAGGGGAGGACAAAGCGGGGCCTCCCGGACTCCAGGCCTCTCCCTCCCCAGCTCTTTCTATTTTGGGACAGCCTCACCACAATGGCGTCCTTATAAACCATAATGGCGATGTTTATGAAGGCCGCAATACCAGTGTATGAAGACAATTTTATGCCTAATTAGAAAATGATGTAACTCGAGAGAAGACAAAGGAAAGCTGTCCCCCTC-CCGTTTCTC-----------TCTCTTCAATCACACCCCCTCCCCACATTTCCTAGGGCCGGACCCCTTGTGAGTGCTTAAGGCTGAAGGACTCTGTTTTGACAGTAGCTGGGCTCCCCGCGCCCCGCTGGCCCTGGCCGCGCGACAGGAGGCTGCAG-GCACGTCCTGC--GGCTCCGGGGCGAAGGCTAGG--------------GAAGGGGATAGAGGGAGGTCGCTGCGGGGAGGGGGACAGAGGCAGGCACAGAGTCCTAAAGAGATTTGAGACTCGCGCTCCTGCACTTTCTATCCCACGCGCCCCCATCCGAGGGGACCTCACCCCTGGGAAGACTCCAATAAATGCAACCC-GGCGCCACTCGATTCCGGGATAATTTTTAATATATATGCAATAAATGTTCACTTTGTTAGATTGAATGACAGACAATAATATCGGCAAATCTTCATATCCATCCATTACCAGCAAATGAGCCGCACAAAGGACAGATTTGCTTTTGATTAATTTATTTGCAGACTCGGGTTGATAAAGCAATAACTATTTGGTTAAACTTGACATTTGGTCTTCAGGGGGTTATCAGACAAA-TCTCTGTCGCCCAGAAGAGATAATAAAGCTGTTTAAAGGGGATTAATTATTAATTGGCTGCAATTAATTTCCCCCCTTTTCTCGGCTGCTGCCACAATTCGCATC-CCTCACCCACAAACAAAAGAC chr4 - 94230402 23934719 23934718 23935899 70294504 70294503 70295684 1181 GTCCGTCCCTCCGGAGACAGTCATTGTCCGGGGGCTGACACCGCGTCGGGGGCCATAGGCGGCTCCATCCATCTCCATCCAGTTAGCCACG-GCGCCGGGACGGGGAGCGT----------------------------------------------CCGC--------GCACCCCACGGCTCCCACCGG----CCGCCAC------------------------------------GGGACGGGCCT-GGTTGGGTTATGCCGTGCCAGGTTGTgccgagccgagccgggaggagccgagccgagccaagccgagccgagccgag--cagggcc--gggccgagccgCCC--CGCGCAGCCCATAC-------------------TTTCCCGGCGGCCGGCACCGGCTTCGGCT----------CTATCGCTACCCCATAATCCC------------------TTTATTAATAGGG--------------AAATTCT--TCCTTTCTGACAATTTAATAGTCCAAAGTAATCATCTGCGTGACATTGCCCATCCGTCTTCTCAAAAGAGAAAACAAAGGGGATGGTTTTG--CCCTGGGTCTCTCCAGATCC----TTTTCTATTTTGGGAAGCTCTCCCCACAATGGGGTCCTTATGAACCATAATGGTTATGTTTATGAAGCCAGCGATACCAGTGTATGAAGGCAATTTTATGCCTAATTTGAGAATGATGTAAGCACGGAGGGGACAAAGGGGGTTTGTGCCCAGCGCCGCGTCCCCGCCGAAGCGATCGCCCCAACCGCACCGC---------------------GCACCCCC--------------------------------------------GATTTTCGTACCGCGCCGCCCGCGGACGCGCAGC--------GCAGCGCACGGCCCGGTGGGGCGCGGGGTGAAGGCAACGCTGAACCCCTCTCCGAAGGGAA----------------CGGCGCGGGGGGCTGCGGGCGGC----------------------------------------------CCTCCCCGCTCCTATCCGAGGGGCCCTCACCTCTGGGAGGACTCCAATAACCGCGGCCCCGGCCCCGCTCGATTAAGGGATAATTTTTAATATATATGCAATAAATGTTCACTTTGTTAGATTGAATGACAGACAATAATATCGGCAAATCTTCATATCCATCCATTACCGGCAAACGAGCCGCACAAAGAACATATTTGCTTTTGATTAATTTATTTGCAGACTCCGCTTGATAAAGCAATAACAATTTGGTTAAACTTGACATTCGGTCTTCGGGGGGTTATCAGCCCAATTCTCTCTCGTTCGGGGGTGATAATAAAGCTGTTTAAACGGGATTAATTATTAATTGCTTGCAATTAATTTCCCCTCTTCCCCGCGCTGACA-AACAATGCGCATCGCCGCTCCC---AACAAAAGGC ....:...:xx...-......x....:..x...x.......x:..:.......:xx:....x.........................x...-..x..xx...x...x.x..----------------------------------------------....--------..x.:..:.x.....:x.x..----.:...x.------------------------------------.x..:...xx.-..x....xx:.-.x.:x....:.:xx.:x.xx.:....:x:...-...--...x:..:..:.x:.xx...:.xx...--..::...--..x..xx:.:....--...x.x...:x.:.-------------------...:..:x.x...--..x..:x.:.:...----------.:x::x.:.:..x.x..:...------------------...x::.x:..x.--------------.:.....--:..::...................x....x...............:..x......:.......xx.:.:..::......x..:xxx.:::.--.:.::..:......xxx:..----:..............x:x:...x.........x........:...........:x............x.x..:................:.................x..:..........x:xx:...::........:::x:...x...xx.-...:x..:.-----------..x.::...:.:....x.---------------------.x.....:--------------------------------------------.x.:::..::..x...:.x..x:..x.....::.--------....-.....x..:.x--..x:x.....:......x.x.--------------......:.----------------...x.x.....:.x.x..xx...----------------------------------------------..:x.x...:..:..........x.......:......:...........x:..::...-...x..:.......xx..............................................................................................:.....:.............:...x...............................x.x................x....................:.......:............x.x..-.....x...::.:.::.x...................x..................x:................:...::.:xx....x::-x.....x......-..x.x...---........:. 14M1I76M1D19M46D4M8D21M4D7M36D11M1D11M1I32M1I3M2I27M2D7M2D14M2D14M19D13M2I14M10D21M18D13M14D7M2D91M2D20M4D154M1I9M11I18M21D8M44D34M8D4M1I11M2I21M14I8M16D23M46D59M1I232M1I91M1D13M1I8M3D10M 884/1142 77.4% 1181/94230402 0.0% 349/1142 30.6% 17943572 NA +14616 chr4 + 190214555 41881192 41881191 41881555 364 GTTGTCACTCCTCTCATTTAAAGCCTCAGAAAAATGCATTCATGAGATTGTTTCTTTATTTTT-----CCTTTCTGCCCCTCTC------------------CGCATTCTTTGCCTATTTGCTTTACGG-CTTTTCAGCCT--TGTTGAGGCCAAGAAAAGAAACCAGGTTCTTTTCTCTTGCGATTGGATCCGTATTCCCAGTTAGGGCGCCTTTTGATGTCCCCATTTAGCGCCTTTGACTGGTCAGCTGAATGG-GGCCGCCTGCTTTTGTCCTTTCCCACAAGTCCCTTCAGAAAGATCCCTTTAAACGCCCGGTACCCGCTGATGGATCCGTTTTCAAACGGCGCGGGGACG------GCAGTGCCGGAGGCCGCGTCTCCTTAGTAATCGC chr4 - 94230402 23936734 23936733 23937106 70293297 70293296 70293669 373 GTTGTCATTCATCTCTTTTAAAGTC-CGAAAAAGCGCATTCATGAGATCGTTTCTTTATTTTTTGTTTCCTTTCTCCCCCTTTCTCGCCGTTTTAAAAACATCGCTTTCTTCGGCTGTTTGCTTTAGGGGCTTTTCATCCGCGTGTTTCGGATAAGAAAAGAAATCAGATTCTTTTATTTTTCGATTGGATCCGAATTCC-------------TTTTGATGTCCC-ATTTAGCTCCTTTGACTCCCGCGGTGAATGGCGGCC-----CTTTGTTGCCGCCCCGCACGCCCTTTAGGAT---TCCCTCCCAACGCCCGGTACCCGCTGATGGATCCGTTTTCAAATGGACCAGAAGGAAAATGCGCGGAGCGAGAGGCC-CGTTTCCTTAGTAATTGC .......:..x....x.......:.-.::....::.............:..............-----.......x.....:..------------------...x.....:.x..:.........x..-.......x..x--....xx..x:...........:...:.......x.:..x............x.....-------------............-.......x.........xx:xx.x.......-....-----....xx.x.:x:...:..x.:..:..x:..x---.....::x...................................:..xx.:.:::x:------..:.x..x:......-...:...........:.. 25M1D37M5I16M18I27M1I11M2I57M13D12M1D31M1I4M5D31M3D56M6I15M1D18M 274/340 80.6% 373/94230402 0.0% 57/340 16.8% 17944458 NA +29539 chr4 + 190214555 41882329 41882328 41882961 633 GACCCCGAGGGCGATTCCGCCAGAAATCCAACGCGGGCCCAAATAAAGTCCGAGGCCTTTTTGTCGGAAGCCCGGGAGGTGCCCGGCCAAGGTGTCCCCTGCCCGGCCAAGGTGG-GGGCTCGAACC-CTGAGCGGCCGCGCCGGCTACTTACGTTGAAGGTGCGCGCATTCCAGACG----GCTCTGACCTGCCTCCGCCGGTCTCGATTATTTTATACATTTCTCGGCGATACACTTATAAACAAGTGGAAATTTTGCATCCTACT-GCACCATTTTATACATGATGAGCCGTCAGTAATAGGATTATTAAACAAAAACCGTCTCAGGCGCTGGCGTTAACCTTTTTTAAAATGGCTAATTAGGTTTTGGACAGAAAAATTAGATTTAACATTGCTTACATTGCCTACATTTTCAGTTGATGCTCCGGTAATTTC--GGATAGGCCGGGCTGCCGCCAAACAAAGAGATAATAAAAAATTAACTATTTTAACATATATTACAGATCTCCTATACCAAAATAAGGCAAAGAATATTTTCATGATCAAATATTATATACATAAAACTAATTATCTTTTTTCGGCAGCCTCCATCAATTACCGGGGAGGGAGGGAGCGCGGGGCGGCGC---GCGCCCTCTGCTGG chr4 - 94230402 23938679 23938678 23939292 70291111 70291110 70291724 614 gAATCCGGCGGGGTTTTCTCCAGAATACAAATGCGTG----AGAAAAGGTTGCGCGTATTTGGAAGCAAACCCGCGG-----CCGGGGGAAGCATTTCGGTCCCG--CAGGGCGAAGGGCGCGAGGAGCGGAGCGGGTGAGCC--TTACCTACGGTCCGGGCGAGCGCTTccccgccgcgccgcaccgccccgccgccgccgTGCGGGATT---TTATACATTTCTCCCCGATACACTTATAAAGATCTGGAAATTTTGCAACCCACCCGCACCATTTTATACATGATGAGCCATCAGTAATAGGATTATTAAACAAAAACCGTCTGAGGCGCTGGCGTTAACCTTTTTTAAAATGGCTAATTAGGTTTTGCACAGAAAAATTAGATTTAACGTTGCTTACATTGCCTACATTTTCAGTTGATGCTACAATAATTTCGGGGGTAGGACGGG-TAAAACAATTCGAAGCCataataaaaaattaactattttaacatatattataGGTCTCCTACACTAGGATAAGGCAAAGAATATTTTCATGATCAAATATTATATACATAAAACTAATTATC-TCCCGCTGCTGCCTCCATCAATTACTGCGGA-------------GCGCGGCGCACGGCGCCCTCTGGCGG ..x:...:x..x.x..:.x......xx.x..:...x.----.:x....x::.x.xx:x...x.xx.x..:....x.:-----....xx:.:.::.::.xxx....--..:..:.:-....x...:xx-.x......x:.x...--:...:....x.xx:..:.x....x.:..x.x..----..x.:.x..:...x......xx.xx....---.............xx...............x.xx.............x..:..:-........................:................................x............................................x....................:.................................x.::.......--..:....x....-.:xx:.x.xx.:...xx.................................:..:.......:..:.::......................................................-.:::x.x..x...............:.x...-------------.x.......---..........x:.. 37M4D36M5D23M2D8M1I11M1I15M2D33M4I29M3D54M1I168M2I12M1D122M1D31M13D9M3I14M 485/602 80.6% 614/94230402 0.0% 43/602 7.1% 17943650 NA +12634 chr4 + 190214555 41890889 41890888 41891250 362 ATTCACCCAGAAGCACATGCATGGTTGAAATCAGAC------CGTCTGGGTGTTTTGGA--CACAAAAGAAACCTTTGACCACTCTGATTTGAGCATATGAGTGTCAAGAACCCCCAGAACAGAGCCAATCCAAAACGCGCTACAGTGTTTCTATTCAGAGGCCATCAATGTGCCTCTTTAAC-GGTTTTTCAGAATCCCAGGAAATTGTGATTACATGGCATTAGCTTTTCATTTTCTGAAGAATGGATGAAAAGCATGAAAGTCCTCTTGACAATGTGAAGAAAAG-----------TATTTTTGGTT-CTGGTATACTTCTGCTGTTTTCTGATAAACACTACACAGAAAATGCCTTTAAGATACCACACAATTATACAT chr4 - 94230402 23942313 23942312 23942676 70287727 70287726 70288090 364 ATTCACACAGATCCACAGAGCAGAATGAAATCAGATGACTTGCAACTGAATAAGCTAGGTTCATGAAAACAACTTTTGAACAGTATGGGTTGAATATA--------AAGAACACACAGAACAGATTAAATCCAAAATGCAATACTGTCTTTCTATTCACTGGGTATCAATGTGTCCCTTTTACTGGACTTTCAGAATCCAAGGAAGTCGTGATTAGATGGCATGAGTGCTCCA-TTTCAAAAGAATAGATAAATAGCATGAAAGTCCCCTTAAGAGTTTAAGAAGAAATCCCCCCGCCCTATTTCTGGTTCCTAGCAAACTT-TGCTGTTCTTTGAGAAATACC---------ATTCCTTCAAGATATCATGCAACTATACAT ......x....xx....x:xxx.:x..........:------.:x...::.:xx:.:.:--..::...:x...:.....x..x.x..:x....::...--------......x.x.........x:x.........:..:x...x..x..........xx..x:.........:.:....x..-..x:...........x.....:.:.......x.......x..:x:.:..-....x:......:...:..x.............:...:.x.:.x.:.::.:..:-----------.....:.....-..:.:.x....-.......:.:...x...:..:---------..x....:......:..::...:....... 36M6I17M2I37M8D77M1I49M1D54M11I11M1I11M1D21M9D30M 252/343 73.5% 364/94230402 0.0% 40/343 11.7% 17948576 NA +7776 chr4 + 190214555 41927388 41927387 41927691 304 AAAAGTAGGAATGTATTACTAATGAAATGAATGACTTAGCACTTAGCAATTGCAAAGATACCCTATCCAACTACAGAATTATTAATCACTGATGGAAGCAGAAATGAGCAAATTGATGACTTGATGGTTCAGTAGAATCCCCCTTGAAAACAGGGGGGAGAGCCAAGTCATCAATAACTCTGGAATCAATTCTTGTTTC-------------ATCAGCCAATTTCTAGCCAAATGGAAT----AATGGCCTCTTGGTAGTCAATTGCTTCAGCTTCGGGGTTTGTGTTACATTTGGATTTTCTTACCTTCAATTAAAATAA chr4 - 94230402 23951158 23951157 23951463 70278940 70278939 70279245 306 AGAAATGGGACTGGATTGCTAATGAGATAGATAA----GTCCTTGGCAATTACAACAATACTCTTCTACATCTCCAAACAATCAATCATCAGTGGTAGCAGAAGTAAGCAAACTGGTGCCTTGATGATACAAAAGAACCCCCTT-----ACAGCTGTCAAAACCAAATCATTAATAACATAGGAATCAATTTCTGCTTCTCCTCTCTGCTCAATCAGCAATATTATAGCAGAGAAGAATTGGGAATGG-----GAGAAGCCAATAGCTGAAACTTAATTTCTGAAGGTACAACTTAATGTTCTT-TCTCAAGTTGAAGTGA .:..:.:...x..x...:.......:..::..:.----.:x...:......:...x:....:..x::xx.::x.x:..:x..:.....::::...x.......:.:......:..:..x.......:.x..:x....:....:.-----....xx.xx.:.:....:....:......x:x..........::..:...-------------......x.xx..x....x:.:x:....----.....-----x:.x..:....x...xx.:...x:xxx:.x:x.x....x:.x:..x.....-:..:x.:..:..:.:. 34M4D106M5D50M13I27M4I5M5D51M1D16M 190/289 65.7% 306/94230402 0.0% 32/289 11.1% 17976230 NA +22714 chr4 + 190214555 41938583 41938582 41939395 813 TTTTTCTTTTTAAATTTAGCAATTCATGATGACCAATAAACTGGACACGGCAATGTGGCTTTCTCGCTTGTTCACAGTTTACTGCTCTGCTCTGTTTGTTCTGCCTCTTCTTGGGTATGTATTATA---------------------------CATATTGCTGCCTTTGATATTCAATTGTTGAGTCAGTTTATATG---GAGTGCCTTTTAGGTGTAAGACTTATTAACCTGTAAAGGGTTTAGGGACAAATAAAATACAAGTTCCAGCCTTCAGGTACTAACAACCTAATAACATTATCAGAGGAATATTTTATATCTTGTGCTTTGTGAA-ACTAACACATTG-AAAATCCAAGGAAAAATTGATGT------GTGGGAATGAGATAAGTTCATGTTTTTTTCATTTTTACTTATTAC-TTGACAGGAAGGTCCTGCTTTATAAAATTCAATTTTATAAATTGATTATAAGAAATTCAGTTGGGCATATATATGAAGTGAAGCTATTAAAACGGTAGAATAAGTTCATGTAATTTTTTTCTATTGACAAGTGATTTAGGTGTTGTGCAATTATGATGCAATTCACAAAGGAGGAAGAGACACTG--CAGTTGTTTATGTCTCATGATAACCTCTCCTCTGGTAATTTGCAGGTTGCATGAAGCAGCAAGCTTTTACCAACGTGCTTTGCTGGCAAATGCTCTTACCAGTGCTCTGAGGCTGCATCAAAGATTACCACACTTCCAGTTAAGCAGAGCATTCCTGGCCCAGGCTTTGTTAGAGGACAGCTGCCACTACCTGTTGTATTCACTCATCTTTGTAAATTCCTATCCAGTTACAAGTATCCTTTTCT chr4 - 94230402 23954832 23954831 23955588 70274815 70274814 70275571 757 TTGTTATCTTTCAATGTAGCAATTTCTGATGGCTAACAAGTTGGACACAGCAATGTGGATTTCCCGCTTGTTCACAGTTTACTGCTCTGCTTTATTTGTCCTGCCTCTTCTAGGGTATGTATTTTAACATTGCGAAACAACAATAAAAGTTTACAAGTGACTACATTCCATTTTCA----TAGAGTAGTTTTCCATGTAAGGGTGACTTTCTATTATTTAGTTTGTTGGGTTG------GTTTGTGAGAAAAGATTTTACTAATT------------TACTTATGTAGGATTGGCTTTA-------AACATTTGTTGA--TGTGTTTAGAAAATGCTCAGCAATTGTCAAGTACTGGCAAATACTCATGTTTTGATGTAGTTATGGAATAATATACTGAGTT----ATTTTTACCTTCAACATCTGCAGTAAGTCACTGTTA---------CAAGTTTTTAAGTGTACTTTGGTAA---CAGT---GCTTATGTATG--------TTAATAGAAATGTGAAA--------------------------------------AGTACTGTGTAACTGTGTTGCAATTCTCAGGGGTGAAAG-GCTTCTGAACAGGGGCTTGGTTCATATGGTAACATCTCCTCTGATGATTTGCAGGTTGCATGAAGCAGCCAGCTTCTATCAGCGTGCCTTGCTGGCAAATGCTCTCACTAGTGCTCTCCGACTACACCAAAGGCTACCACACTTCCAGCTTAGCAGGGCTTTTCTGGCCCAGGCTTTGCTGGAGGACAGCTGCCACTACCTGCTGTACTCTCTTATCTTTGTGAATTCCTACCCTGTCACAAGTATCCTTTGCT ..x..x.:...x...x........:x.....:.:..:..::.......:.........x....:...........................:.:.....:...........x...........x..---------------------------..x:.x:..:.x..:x..x....----.x....x:x...x:...---.:...x....:x:x.:.xx:::..:..::x:..------....:x.::x...x.xxx...x.:..------------....x.::xxxx.x.::.x...-------..:....xx.:x--....:..x.x:..-:..x.xxx....-x..:.x.x:.x...x.:.x....------..:.xx...::....xx.xx..xx..----........:.x:x..-.:x:...x...x:x...:.x---------...x...x...:.xx.:.x.::x..---....---..x...:....--------:..x..:..xx..::..--------------------------------------:..::....:..:.:..x........x..::..x.:...-.x:x...--...xx.:..:xx..x:...:....x.........:.:.......................x.....:..:..:.....:.................:..:........xx.:..:..:.....::..............:.x.....:..x..:...............:.:.....................:....:..x..:........:........:..x..:.............x.. 126M27I23M4D17M3I33M6D26M12D22M7D12M2D13M1I12M1I23M6I26M4D15M1I20M9D25M3D4M3D11M8D17M38D39M1D7M2I245M 519/716 72.5% 757/94230402 0.0% 138/716 19.3% 17983751 NA +6663 chr4 + 190214555 41943724 41943723 41943821 98 TTTTCCTTAATTGTTTTCTTTAGTGAGTATCTTCCCAGTCTTGTTATTCTCTTTGCTTCATGCTGCCACATATACGAAAAAGGTCCTTGACGTAAGTA chr4 - 94230402 23956740 23956739 23956835 70273568 70273567 70273663 96 TTTTCCTTA--TTCTTGCTTCAGTGAGTATTTTCCCAGTTCTGCTGTTCTCTTTGCTTCATGCTGCCACATACACAAAGAAGGTTCTTGATGTAAGTA .........--.x:..x...:.........:........::..:.:..........................:..:..:.....:.....:....... 9M2D87M 82/96 85.4% 96/94230402 0.0% 2/96 2.1% 17986984 NA +9778 chr4 + 190214555 41944757 41944756 41944933 177 TCACTTATTTCTAATGTTGGTTTTCTTTTGTTTTAGGCAAGGGGCTCAAATAGTTTACCTCTGCTGAGATCTGTCTTGGACAAATTAAGTGCTAATCAACAAAATATTCTGAAATTCATTGCTTGCAATGAAATATTCCTGATGCCTGCGACAGTTTTTATGCTTTTTAGGTAAGGA chr4 - 94230402 23957562 23957561 23957738 70272665 70272664 70272841 177 TCACTTGTATATTTTATGGTGTTTTCTTTCTTTAAGGCACGAGGCTCAAATAGCCTGCCCTTTCTGAGAAACCTTCTGGAGAAGCTGAATGCTAATCAACAGAACATTCTAAAATTCATTGCTTGCAATGAAATTTTTCTGATGCCAGCCACAGTTTTTATGCTCTTCAGGTAAGAA ......:.x.x.xx.:.x.xx...::...x...x.....x.:...........::.:..::.x......xx:x.::....x..::.:.:............:..:.....:.......................x..:........x..x..............:..:.......:. 177M 135/177 76.3% 177/94230402 0.0% 0/177 0.0% 17987195 NA +6509 chr4 + 190214555 41949255 41949254 41949434 180 CATGAATTGAAATGTATATTTATCAC-GCTTGTATTTGTTTATTTCAGTGGTCAAGGAAGTTTGCTCCAACCTTTTATATACTATAGATTTCTTACCCTTCGATATTCGTCTCGAAGAAACCCATATTGTCGGTAAGCTGATGATTATTTTAGGCATGTTTTATTTGTTGAGAGTATTGTG chr4 - 94230402 23959412 23959411 23959588 70270815 70270814 70270991 177 CATTTATTTAAATCAACATTAACCTCTGCTTCTCTGT-TCTATTTCAGTGGTCAAGGGAGTCTGCTCCAGCCATTTATTTACTATAGGTTTCTAACATTACGCTACTCTTCTCGGCGAAACCCGTACTGCCGGTAAGCACCACATTGATTTTGGAA---GTTAGTGTTTGACAGTGTAGTG ...xx...x....xx.:...x.:.x.-....x.x.x.-.:.................:...:.......:..x.....x........:.....x..x:.x..x..:..x.....:x.......:..:..:........xxxxx...:x...x..x.---x...x.xx....x...:.x... 26M1I10M1D118M3D22M 129/176 73.3% 177/94230402 0.0% 5/176 2.8% 17989843 NA +12951 chr4 + 190214555 41954020 41954019 41954420 401 TGTATTGCTTTTTCCTTGTGTTTCTCAAAGAAAACTATTTTGTCTTG--------CAGGACCTTATTTAATGAACTGAGGATTGTTGTTGAACACATAATAATGAAACCTGCTTGCCCACTGTTTGTGAGAAGACTTTGTCTCCAGAGCATTGCCTTTATAAGCAGATTGGCACCAACAGTTCCATAGTTTAACATCTAGTTAAGCTACAAATATAGTATAAGCATTATTAGCAGCTGGTACTTCTGCTAGGGGTTGTAAATTCCAGGTGTTACACTGACCTCAATCCAATTTACATAATTTACATAAATGCATCTCGG-------TGGAAAAATAATCATTTTCTTGGCATGTT-AAATCAAGCTTAAAAAGTTTTGAGAAAATTTTACTGCGCTGTGTTGCTAATGGTT--AAAGAA chr4 - 94230402 23960894 23960893 23961283 70269120 70269119 70269509 390 TGTATGATTTTTATTCTGTATTT-------AAATCTTCTTTTTCTTTTTTGTCCCCAGGACTCTCTTCACTGAGTTGAGAATTGTTGTTGAACATTTAATAATGAAGCCCTCATGCCCTGTTTTTGTAAGAAGACTATGTCTCAGCAGCATTTCCTTTATAAGCAGATTGGCACCAACTGCTGCATAGCCAAAT------TTCAGACACGCGTCTATTGTGAACATTATGAGCAGCTGGCACTTCTGCTGATGAT--TAAATTTCTGGTTTTACACTGATCTCACTCCAGGCTGTATAA-------AAATGTGTCTTTGCTTTTCTTGGAGATAATATGAAAT--TTAGCATATCAAAAGCAAGTCATGGAAACTTTAAAA-----TTACTGTGCTATATTGGTAATTGGTGGAAAGAA .....x::....x:::...:...-------...x..x:...x....x--------......::.x..:.x...::....:..............:x..........:..:x.x.....xx.x.....:........x......x:x......x.........................x.:.x.....::x..:------..x..x:..:x:.x..x.:.:.:......x.........:.........::x.:.--......:.x...x.........:....x....:x:.::....-------.....::...:x.-------....:.x.xx..x.xx.--..:....:.:-...x....::xx::..::...:.:.-----......:...:.:...x....x.x.--...... 23M7D17M8I139M6D55M2D42M7D13M7I17M2D10M1I25M5D25M2I6M 271/372 72.8% 390/94230402 0.0% 47/372 12.6% 17993126 NA +4242 chr4 + 190214555 41956053 41956052 41956126 74 CTGTAGCCTCTGCCTCCTGGGTTCAAGTGCTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::....:xx:x..:.................x.xx.x........::.:.........:......x...... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 23758927 NA +3737 chr4 + 190214555 41958784 41958783 41958866 83 CTGCAACCTCTGCCTCCTGGGTTAAAGCGATTCTCATGCCTCAGCCTCCCTAGTAGCTGAGACTACAGGCGTGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.......x...:.x...x..x.x........::.x........::......--..........:::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 23761658 NA +37743 chr4 + 190214555 41959902 41959901 41960587 686 TGTCAGCATTTCTTAGTAACTTCTCTT--GAATCCATTTTT-----AATATCTAATATTGTACAGGTTGGGGAGTTACATTCTTCAGGCCAATACTATCCAGACTATATAAATTTATAAAATAAATTGAAAAATTCAT---TCCCCTGTATTCAAG-ACCAAAGCACATAAATGCTAATGTAGGGCTCAGAGGGGAAATACAGTTCTCCTGCATATTTGAGAAAATGTGAAGTCCTTTCAAGAAAATCTAATAAACATAATAATCATAGCCTGCTGACACTAAGGAAAAAGGACCTCATTCACTCTTTCTTTTATGCAGTGATTTACTGGTCCCTACTGATTTCCAAATTGGATCACGATAGTAAATTATCCATGCTGGTACCTGTGAAAGTAAGCCCTGGGATCCATATTTGTTTTGTGTTCTGCTTAAATCAGCAAGAATGATAAATTTGATGGTGTGAAATTGGAAGTATCAAGGGCTTTCTTTGGTGATTGAGGGAAATAATGTCTCTACTTGTAATTTATTGTGACCCTTTTTCACTGTATATGCTTTGTATGTCTAA----TATTTATTTCAATGCAAATTCAATTGTTCCTTCATCTGTATTGTTATATCTAAGATTTTATTGATG---TTAAAATCTAATTGTGGAATAAAAATCTCTCTGGAATTTAGCAGATAC-AAAAATGTTATCTTGCAAAA chr4 - 94230402 23965124 23965123 23965814 70264589 70264588 70265279 691 TGTCAGCGTTACTTATTAAACTTTTTGCAGAAGCCAGCCCTGTGATAATGGCAGATATTGCCCAGGTAAGGGAGTTTCATTGCTCCGCTCCGTGCCATCCAGATGGTACAAATTTCTCAAATGAATTGAGAAATTCATCTTTTACTTGCATTGAAGGACTGAGGCACA-AAATGCTAATGTAAGGCTCTGAGGGGAAATACAGTTCTCCTGCATATTTGAGAAAATGTGAAGCCCTTTCAAGAAAATCTAATAAACATAATAATCACAGGCTGCTGACACTAAGGAAAAAGCACCTCATTCGCTCTTTCTTTTATGCAGCAATTTACCGGTCCCTACTGATTTTCAAATTGGATCACTGCAGTAAATTATCCATGCCAGTACCTGTGAAAGAAAGCATTGGGATCCATATTTGTTTAGTGCTGTGCTTAAATCAGCAAGAATGATAAATTTGATGGTATAAAATTGGAAATACCAAGGGCTTTTCTCAGTGAATGA-GCAAGTAA---CTCCATTAGTAATTTATTGTGACCC-TTCTCACTGTATGTGCTTTGTATGTCAAATATTTATTTATTTCAAAGCCAATTAAATTGTTT-----TCTGTGTTGTTACAGCTATGGTTCTGTTGATGTAATTGAAATCAAATTGCATATTTTTTTTTTTTCTGGA---TGTAAAATACTATCAATGTTACATTGCAAAA .......:..x....x...x:.:.:.x--...x...x:::.-----...:x.x:......:x.....x:.......x....x:..x.x:.x:.:.:.......:x:..:......x.x....:......:........---.:x.:..:...x...-..::.:.....-.............:.....x...........................................:.................................:..x.....................x.........:.................::......:...............:.............x::................::.............x....x:..................x...:.x..................................:.:.........:..:..........::.::....x...-.x..:...---...:.:.x.................-..:.........:.............x..----............x..x....x.......:-----.....:......:.x...x.:..:.:......---..:.....x.....::x.x.xxxxx.:.:......---.:xx.:....-.xx.......:x........ 27M2I12M5I92M3I15M1I11M1D327M1D8M3D25M1D29M4I29M5D32M3I35M3D10M1I20M 554/672 82.4% 691/94230402 0.0% 33/672 4.9% 17994778 NA +3108 chr4 + 190214555 41971090 41971089 41971152 63 TATATCAAAAGAACTAAGAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 27486699 27486698 27486761 66743642 66743641 66743704 63 TGTATTATAAAAACCTGAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGT .:...:.x..:...:x::......xx..................:x..x...x....:x:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 14484391 NA +5404 chr4 + 190214555 42009269 42009268 42009517 249 ACATTAGACCTTGTTAGCCATCAGACAGAGTGCAAGTAATTGCTTGATTGAAAGATAATTTGTATATTTAAAGATTTGAGA----TTGAGTTTTGAATAATTCAAATCACATGATAAAGTCAGGAACAGCTCATTAAGAAGCAGAGACTTGCTAAGGAATCCTTAAGTTTTTAAGGAGCATTCAGATTTGTTAAAT-------TTTAGTAAAATTAGTTTTAATTTTGCTAATGACAGCAGATGTGTGGCAAACAGCCAG chr4 - 94230402 23977004 23977003 23977245 70253158 70253157 70253399 242 ACATTACTCATTAGTTGCTGTTA---AGGCAGTAAGTAACTATCTGATGAAAAGACAGTTT-TGTAATCCAAGCTTTAAGAATATCTGACCTCTGTGTAATTTGAGTATCAC-ATCGAGCTAGAAGTATCTCATTAATTAATGCCAACCTCCTTGAAAACCCTTTTTTTTTTC-------------TTTTTTTAATAATTCCTTTCATTAAGATCAGTTTTAATTTTGTTAATGACTGTGGATGTGTGGCAGACTTCTAG ......xx.x..:x.x..::.:.---..:xx.:......:.:::....x:.....:.:...-.:..x.:x...x...:...----:...x:.:..x:.....::.:.xx..:-..x:..::..:.::.x........xx.:::xx:..:.x..x:::..:....xxx.....x-------------...x..x...-------..:.x...:..:.............:.......x.::...........:..xx.:.. 23M3D35M1D19M4I27M1D60M13D10M7I57M 151/231 65.4% 242/94230402 0.0% 29/231 12.6% 18032265 NA +8365 chr4 + 190214555 42020391 42020390 42020518 128 TTATGTTTTCCTGTTTTTTGTTTAGTTAAAGCAGTCCTTAAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATAATTTCATCACTGGAGTCAGAGCGATAAATGAGTTCTGCCTCAAATCCAGGTA chr4 - 94230402 23979350 23979349 23979473 70250930 70250929 70251053 124 TTATCTCTTTCTGTTTTTA----AGTGAAAGCAGTCCTCAAGAAAAGAGAGTATGGACCAAAATACACACAGAACAACTTCATTACTGGAGTCAGAGCAATTAATGAGTTTTGTCTCAAATCCAGGTA ....x.:..:........x----...x...........:........:........x:....:.....x.....:..:.....:..............:..x........:..:.............. 19M4D105M 106/124 85.5% 124/94230402 0.0% 4/124 3.2% 18041041 NA +11996 chr4 + 190214555 42022829 42022828 42023449 621 TTTCTCTAGTGATCTAGAACAACTTCGAAAAATCAGACGACGAAGTCCCCATGAAGATACTGAGTCTTTTACTGTATACTTGAGATCAGATGTGGAAGCAAAGTAAGAACATAGTTCTTTCAGAATAAAAGTGCAAACCAAATTTTGGATTAATAAAAATACATTTTAGACAGAGTCAGAATTTTTTAAA-------TGACTTTTTAAAA-----ACAATAT------TTTTGTATTTGCAAATCTGTTTATTTGTGAGTTACTAATATGTACTCCTTAACTAAATATATGTCA--------TAATGTGT------AAGAAA-----ATTTGCTGTTGAATTTACTCTAGTTGTTTAGATTTCATTTGGAAAAGTTCCTAAGTCCTTTATGTTTCTCCAAAAGCACC----TTACACTTTGTTGT----AAGATTCTCATTAGAGAATTTAGATTTAAATGTGAT-----GTCAATAAAGTCATTAAA-ATTGTTC-----------ATTGTGGTGACCATGTGTGTA---TGCACAGATCTTTGGAAGTTTGGGGAAGCCCTGAAGCTCTTGCCAGAGAGAAAAAATTGCGTAAGGAAGCAGAAATAGAATACAGAGAAAGTAAGTATA-----TTCAATTTAAAGTCAAGTTAATTGAAAAAT----------AACTTGTAGATGAGAACTGTATCTGT chr4 - 94230402 23980160 23980159 23980824 70249579 70249578 70250243 665 TTTCCTTAGTGATTTAGATCAACTGCGGAAAATTAAACGACGAAGCCCCCATGATGACACTGAGACTTTCACTGTGTACCTGAGGTCGGATGTAGAGGCCAAGTAAGAG---AATTTTTGTAAAGGAAATG------------TTTGGCTCATTTAAAATAGGTTGTATG-AGAGGGAGAGCTTTTAAAAGCAAAGTTTACAGTGTGAAAGGGCGGCAATATTTTCCATTTTCTATTTGAATA-CAATTTACTTCTTAATT-----TTTGTAA-CTGTAACTGAGTTTGTGGAGGCTGTGTTTCATGTGTTCAATGATGAAACACTTCTCCCCTGCTGCCTCTCTCTCAATT-------TTTTGTTCTGCAAAGT-----AATACGTGACTTTTTGTCAGAAGGAACAATGCGATTTTTTGTTGTTAGGAAAATCATTTGTAACATACTTAAACTAAAAAGCAGTTGCAGGTCTGCTGTTTCATTGAGTATTACTTGCACCAATAGAACTGTTGTTAAAATACTTGTGCTCTGCACAGGTCTCTTGAGGTTTGGGGTAGTCCAGAGGCTCTTGCTAGAGAGAGAAAGCGACGCAAAGAGGCGGAGATCAAATACAGAGAAAGTAAGTATAGAATTTTCAAATT-AATTCAGGTAAACAACAAAGTATGATTGGAAATCCCCTAGATGATCAGTGTATCCGT ....::.......:....x.....x..:.....:.:.........:........x..:......x....:.....:...:....:..:.....:..:..x........:---.:..:..x:.:.:x...x.------------.....x.:.x.x......x:..x..x:-....xx...::....x...-------.x..xx.x.:...-----:......------....x......x.x.-.x:....:..x.x.:..-----.x....x-.:x.....:.:.x.:..xx:--------.x......------.x....-----x.::x...:..xx.:.x::::.:..-------...::..:x.x.....-----.:.x.x.x.:x...:x:..:...x.x.----:x.:x:........----..:..:x.:xx..:x:x.:...:.:.x...x.:::.-----...x::x:xx.....:.:-...::.:-----------.:...x..x.xx..::x...:---.......:...:.x..:........x..:..x..:........:.......:...::x:..:..:..:..:..:..x:.....................-----.....x..-..x...:..x..:x:x...:.----------.x.::x.......xx.x......:.. 109M3D19M12D27M1D19M7I13M5I7M6I15M1D17M5D7M1D20M8I8M6I6M5I25M7D16M5D27M4I14M4I36M5I18M1I7M11I21M3I99M5I8M1D21M10I26M 401/585 68.5% 665/94230402 0.0% 116/585 19.8% 18042669 NA +4377 chr4 + 190214555 42035221 42035220 42035362 142 AACTGTGACTGGTAAGAATATCTATGACCTAAATTTATTTTGTTATTCTTACAGGGCTATTTAGAAACCAAAAAATATTAAGAGAATACAGAGATTTCTTGGGAAATACCAAGGTATGGATATCTTTGTAATAATGTGTGTG chr4 - 94230402 23981849 23981848 23981975 70248428 70248427 70248554 127 AATTGTGAATAG--AAAATATTCATGGT----AACAATTTTGTG----CTGCAGATTTGTTTAGAAACCAAAGGCTATTGAAGGAATACAGGGAGTTCTTTGGAAATACTAAGGTA-----AGCGTTGTTTTAATGTTTTTG ..:.....x.:.--.:.....::...::----.x:x.......x----:.:...:x:.:.............::x....:.::........:..x.....x........:......-----.x.x....xx......x.x.. 12M2D14M4D12M4D68M5D21M 93/127 73.2% 127/94230402 0.0% 15/127 11.8% 18053372 NA +3275 chr4 + 190214555 42037225 42037224 42037271 47 AAATTAAATGCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 71805978 71805977 71806024 22424379 22424378 22424425 47 AAATTAAATACCTGCTTTTTTTTTTTTTTTCCCCTTTATTTTTTTTT .........:...x................::::...x......... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -29768753 -64461649 +3130 chr4 + 190214555 42037846 42037845 42037922 77 CTGCAACCTCCGCCTCCCGGGTTCAAGAGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACGGGCAC-CCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACT ..:..:..:xx:x..:.:.........x.x...x..x.x........::::.........:.:...:x.::.-..... 72M1I5M 53/77 68.8% 78/94230402 0.0% 1/77 1.3% 23840720 NA +6153 chr4 + 190214555 42038970 42038969 42039071 102 TTTTGTTTTTTTACAGCCACGCTCCAGAACAGCATCAGTGTTTTTTAAGGGACCAGGAAAAGTGGTGATGGTTGCAATTTGCATGTAAGTACTGAAAAATAA chr4 - 94230402 23982968 23982967 23983068 70247335 70247334 70247435 101 TTATTTCTTTTTACAGCCACGCTCCAGTGCAGCAGCTATGTTTTTCAAGGGACCAGGGAAGGTGGTAATGGTAGCTATTTGCATGTAAGT-TTAAAAAGGAA ..x.x.:....................x:.....x.x:.......:...........:..:.....:.....x..x..............-:.:....:x.. 90M1D11M 83/101 82.2% 101/94230402 0.0% 1/101 1.0% 18056002 NA +7229 chr4 + 190214555 42049358 42049357 42049501 144 TTTTCTCTTTCTCTTCTAGCAATGGATTAAACTGCTTCTTTAAATTTCTTGCCTGGATTTATACCGGTTCAGCAAGTATGTTCTCAGAAGCTATACACTCATTATCTGATACTTGTAATCAGGTGAGGACTAAAGCTTTTTTTA chr4 - 94230402 23983903 23983902 23984036 70246367 70246366 70246500 134 TCTTCTCTTTATTTTC-AGAAATGGGTTGAATTTTTTCTTCAAGCTACTTGCTTGGGTTTACACGGGTTCTGCAAGTATGTTTTCAGAAGCTATACATTCTTTAGCAGACACATGCAACCAGGTGAG---------TTTTTTTA .:........x.:...-..x.....:..:..:.x:.....:..::.x.....:...:....:..x.....x...........:..............:..x...x.x..:..x..:..:........---------........ 16M1D110M9D8M 107/134 79.9% 134/94230402 0.0% 10/134 7.5% 18065455 NA +3101 chr4 + 190214555 42053683 42053682 42053738 56 TGACTCGGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATGTTATAGCA chr4 - 94230402 4674533 4674532 4674588 89555815 89555814 89555870 56 TGTCCCATTTTCTAGAAAACTAAAAAAAAAAAAAAAAGAAGAAGAATACTATAGCA ..x.:.:x.:..:.:....xx................:..:.:....::....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 37379150 NA +3737 chr4 + 190214555 42060171 42060170 42060251 81 TTTTTTCTTCTTCTTCATAGGGTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCGTAAG chr4 - 94230402 23986163 23986162 23986243 70244160 70244159 70244240 81 TTTTATTTTGTCTTAAATAGGCATTGCTAGCTTTGGGCATCAGTCAGTCTGCAAGGACGCCTGACCCTAGTCATCCGTAAG ....x.:..x.::.xx.....xx..:.....x............x......:xx::..:..x..:...xx........... 81M 59/81 72.8% 81/94230402 0.0% 0/81 0.0% 18074008 NA +10410 chr4 + 190214555 42062953 42062952 42063142 190 TTCTTGCGAACTATATTCTTTTCTATTTTTCAGGTACGGATTTTCAAATATGCGCTATATTTCTTCGCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTTCTATGGGTAATCCTCTTTTTTTCTCCT chr4 - 94230402 23987415 23987414 23987604 70242799 70242798 70242988 190 TTTTCCTAAATCACTTTCTTTCTTTATCTTTAGGTATGGTTTCACAAACATGCGCTATATTGCCTCCCTGATTAGTGGGGTGGGCATTTTCATGATGGGTGCAGGACTTTCTTGGTATCACGGGATCATGGGCTTACTCCATCCTCATCCTATAGAATCTCTTCTCTGGGTAAGCTAATTTTGTTATTCT ..:.:x::..::.:x......::.xx.:..:.....:..x..:x....:............x.:..x..:........x..x..:.......................x........:..:..::.......x..:..:........x..x........:.....x.......x.:xx....x..x.:.. 190M 144/190 75.8% 190/94230402 0.0% 0/190 0.0% 18075538 NA +4313 chr4 + 190214555 42065305 42065304 42065379 75 TCTAGGCATATTGTATTTTAGCAGGATCATTAGTATCTGAAGGAGGTATGTACTGTCACAAAGT-ATGTCTCTATT chr4 - 94230402 23988002 23988001 23988074 70242329 70242328 70242401 73 TCCAGGCATACTGCATTTTGGCAGGGTCATTGGTATCTGAAGGAGGTATGTA---GCTCAAAGCAATATTTCTATT ..:.......:..:.....:.....:.....:....................---x.x.....:-..:.:...... 52M3D9M1I11M 61/72 84.7% 73/94230402 0.0% 4/72 5.6% 18077303 NA +8069 chr4 + 190214555 42066536 42066535 42067210 675 TGCTTTTCTTTTAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGCTCGGGCTAAAGGAATGTCATTTTACAAGTATGGTATGTA---TTTTAGAAACCAAGTGTTTGTTT------CACCTCCCTTATTTGCTTAAAATTACTT---------AGTACTGTTATTGCTTTGTTCCTAATAGAAATGTACAAAATATATCTGAATATCATCCCTGTGTGGCTCTTACATATCCTTCAGCCCTTATTAAAAAGAAATG-TAGTATAGAAATTTGA--------ACATGGATACTTT-------ATATTTGGATTTGACTTAAGTGAACTAAGGTATTTCTTTATA-TGGTTATATAACTTGAGAAAG----------TAATTTGACTTTATGTATCAGTTATTGTTGACATTTAAGCCAAGAAATTATGTTTGCATTGAGCAAGGTTTTTAAAATCATAATCT---CTCATACACTTTT----TTATCTTAACTTATATCTTGATTTTAAATGGATACTTATTAAAATGTTAC-CTGATAGTATCAAG-TTAAGATTTTAGAAATTTTCTTGTCTTGTCTCTTCCCCAATGACTAGTAATGGAAAGTCGTGATCCTAGTACAAATGTGATATTATTGGAGGATACTGCTGCAGTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGTAAA--TATTCCTTAAATT chr4 - 94230402 23988455 23988454 23989144 70241259 70241258 70241948 690 TGGTCTCGTTTCAGCTACCCTTCTTGTTGCTATAAATGAAATCCGCAGGAGTGCTCGAGCCAAGGGTCTGTCATTTTATCAATATGGTATGTGTCCTTATAGCAGTAAGGTATGTGGTTATTTAAAACAGAATCTATTTGCTTGCATTTGCCTAATTATAGAAATAATTTTGTCCCTTCACTTCCAATTTACCCTTGCTTTATTGGTTTGTTTTCTGTTCTAGTAAGA---------------AAGCCATTTTACAAATTAGATGATAACCTATTGATTTAAGTAGCAATACTTAAATACTCTTACTGAAATACTTGCATTTTTTTTTTATAAA------TACTGCTTTACACTTCTCAAATGTTTAGGAGAAGCTTCCACAATTGCTTCCATGATATGCACTTGGTA-TGTTCTCTTC----------ATTTGTGAATGCTTTGTGAAAGCACATAGAATTCACAGTTTACAACTATATAGTTATGGAATCTTTTTGTCTAATTTGATGGTGTTAA---TATTGTTCATAGAGCACTATGCAGAATGTAGTAAGACTAAGATTTCCAAAGCAGTCTCATGTTTTTTGT------GTATGCAGTCGTGCAGAGTCGTGATCCGAGCACCAACGTGGTGTTACTGGAAGATGCTGCAGCAGTTCTAAGCGTGGCTGTAGCTGCTACCTGTATGGGTCTGACGTCTTTAACAGGTAAAATTCTGCCTTAGATT ..x.:.:x...:...x..x............:........x.:..:....:......:..:..:..xx..........:x.:..........:---..x...x.::x.:..:.x..x..------x..xxxx::.........:x.x..:.:.---------.:..x.x..:.:x...:::.:.:...xx.xx:x.:.xxx..xx:.:..xx.x:::.:.:x..:x.:---------------x....x..x.xx...xx.:...-..::x..xx:....:.--------..x.::.....:.-------...:...x....xx:..xx:.:..------..:.x.....:.-.xx.:.x..:x:.x.:::...----------.:x..:x.:xx....:.::x.x..-....xx.x.:----------.x..:..xx...x...x.x...xx:x.x:..x...:.:.:.---x::...:.x..x.----.:x.:..:x..x..x.xx..:.x....---x..xx..xx..:.::::..:-.x..xx...x:...-:........:x:..::xx...::.x..x.:.x.------:.:xx:...x:..x.:...........x..:..x..:...:.:...:....:...:....x.....::.::.x..x::x:....x..:..:..:.....:..x..x...x...........--.x.x.....:... 93M3I23M6I28M9I66M15D22M1I16M8I13M7I24M6D12M1I21M10I24M1D10M10D41M3I13M4I27M3D20M1I14M1I33M6D121M2I13M 393/634 62.0% 690/94230402 0.0% 97/634 15.3% 18078081 NA +9161 chr4 + 190214555 42070514 42070513 42070707 194 TGCTTCATTTAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCTCATCTACACTAACACAGAAGCACTCTTAGGGCGGTCCATCCAGCCAGAACAAGTACAACGGCTCACTGAACTCCTGGAGAATGACCCATCAGTAAGGTCAGCCTTATTCCAG chr4 - 94230402 23990227 23990226 23990420 70239983 70239982 70240176 194 TGTCTTGTTTAGGAAACCCATACTATGACAGCGTGGGGTCTCTTGGTGTTGGGACTTTGCTAGGAACTGTGTCAGCATTTCTAATCTACACTAACACTGAAGCCCTGCTGGGACGATCTATTCAACCTGAACAACTGCAGCGACTTACTGAGTTACTGGAAAGTGATCCTGTAGTAAGGTGAGAGTCTTTGCAG ..::.::......x..:...:xx.........x.:..x...:.x.....x..x..:..::....x.:x..x........:..x..............x.....x..x:.:..:..:..:..:..:..x......x.:..:..:..:.....::.x.....:.:...:..xx:........x..xx.:x..x... 194M 138/194 71.1% 194/94230402 0.0% 0/194 0.0% 18080287 NA +3480 chr4 + 190214555 42074994 42074993 42075092 99 TTTAGAAAATTGATTTAGAGTTAATGAATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 71863009 71863008 71863098 22367305 22367304 22367394 90 TTTATAAAATTGTTGTA---------AATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCTG ....x.......x.x..---------.....x...x.:x.x..:x....x....:.:x.:x.x...:....:.x...:.x................:.. 17M9D73M 67/90 74.4% 90/94230402 0.0% 9/90 10.0% -29788015 -64442387 +3014 chr4 + 190214555 42075021 42075020 42075079 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% -682834 -93547568 +3040 chr4 + 190214555 42075021 42075020 42075072 52 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681932 8681931 8681983 85548420 85548419 85548471 52 ATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..........:...::.:.:.:...:.....xx.x............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 33393089 NA +3305 chr4 + 190214555 42075021 42075020 42075074 54 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 33393091 NA +3388 chr4 + 190214555 42075023 42075022 42075076 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 33393093 NA +3282 chr4 + 190214555 42075026 42075025 42075081 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -50660322 -43570080 +3198 chr4 + 190214555 42075028 42075027 42075090 63 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865516 89364887 89364886 89364949 63 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTT ..x.x..............x.:x.x...x.x.x.:.........x..x....x.......... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% 37209574 NA +3496 chr4 + 190214555 42075028 42075027 42075083 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -50660320 -43570082 +3235 chr4 + 190214555 42075029 42075028 42075089 61 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681943 56681942 56682003 37548400 37548399 37548460 61 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ......x:.:....x:.:...:....:..x:.......x...x...x....x......... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -14606914 -79623488 +3282 chr4 + 190214555 42075030 42075029 42075085 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -50660318 -43570084 +3252 chr4 + 190214555 42075031 42075030 42075092 62 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681943 56681942 56682004 37548399 37548398 37548460 62 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ......x:.:....x:.:...:....:..xx.......x...x...x....x.......... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -14606912 -79623490 +3257 chr4 + 190214555 42075032 42075031 42075093 62 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::....x.....:...:..:.:......x.x......:.x.........:.x...:::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -50660316 -43570086 +9605 chr4 + 190214555 42075648 42075647 42075807 160 TGATTGCAGGGCAATTCATGATGTTAAAGCCACAGATCTGGGATTAGGTAAAGTAAGATTTAAGGCAGAAGTAGATTTTGATGGGCGAGTTGTTACAAGATCATATTTGGAAAAACAAGATTTTGACCAAATGTTACAAGTAAGTTTA-----------TTTGTTGTTTTC chr4 - 94230402 23992240 23992239 23992410 70237993 70237992 70238163 171 TGGTTTCAGAGCAATTCACGATGTTAAAGCCACAGACATGGGAATGAGCAAAGTGAGATTCAAGGCAGAAGTAGACTTTGATGGACGGGTTGTTACACGTTCTTACCTGGAGAAACAAGACATTGAACAGCTGCTACAAGTACGTTTAAACAAAGCGACTTTGTTACTTCC ..:..x...:........:.................:x.....x.::.:.....:.....:..............:........:..:.........x.x..x..::....:........:x....x..:x..:........x.....-----------......::..:. 148M11I12M 129/160 80.6% 171/94230402 0.0% 11/160 6.9% 18083408 NA +3015 chr4 + 190214555 42075723 42075722 42075795 73 TTTTGATGGGCGAGTTGTTACAAGATCATATTTGGAAAAACAAGATTTTGACCAAATGTTACAAGTAAGTTTA chr4 - 94230402 8307896 8307895 8307968 85922435 85922434 85922507 73 TTTTGGTGAGCAGGGTATTACAAGATCATTTCTAGTAAATTAGTATATATAGCCAATGTTCCAATTAAATTTA .....:..:..::.x.:............x.:.:.x...x:.:x..x.xx.x.x......x...x...:.... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 33767827 NA +8436 chr4 + 190214555 42078201 42078200 42078335 135 TTTCTTTATAGGAAATTCAAGAAGTGAAAACTCCTGAAGAACTAGAGACCTTTATGCTTAAACATGGAGAAAATATTATTGATACTTTAGGAGCTGAAGTAGATAGACTTGAGAAGGAACTGAAAGTAAGATGTA chr4 - 94230402 23994508 23994507 23994642 70235761 70235760 70235895 135 TTTCTTGCAAGGAAATTCAGCAAGTGAAGACCCTAGAAGAATTAGAAGCGTTCATGCTTAAGCATGGTGAGAATATCATTGACACGCTGGGAGCTGAAGTAGACAGACTTGAGAAGGACCTAAAGGTAAGATTTA ......xxx..........:x.......:..:.:x......:....::.x..:........:.....x..:.....:.....:..x:.:..............:..............x..:..:.......x.. 135M 108/135 80.0% 135/94230402 0.0% 0/135 0.0% 18083693 NA +5564 chr4 + 190214555 42086055 42086054 42087677 1623 TAATGTGGTGGTGATTTTTCTT---TCCAGAAACGAAATCCTGAAGTTCGACATGTAGATTTGGAGATACTGTGAGTTTGATGGAATGAATCACCTGGGTGGGGAC--CTTGGAAACAAGTT-TGTCCGTCCACTCTACAAAGTTTCCT-------------------------CCTCTCCTACACTGAAAGAC-----------TCAGTGCCATGCAGAA-GCCTTTTTTTTAAGATGAAGGAAATATTTTATGTAAAGA---------GCAACTCAGCAGGACACAGAACTAAAACTACT--ACTTACA-TCTAACAGACACACTACAAGTTGAAT-CAATTTGAAAATCATGTTTTTATGCTTCCATAGGGAACATTTTGGTTATTTAAATTGTTCATAATGTCC--CATATTTCACCTGTTCA-GTGTATACTGTACTTTGCAATCATCTTTCCTTTTTTCACATT-------GGTAAAAATAAGTGGCATCCATAGGATCATGATTTTTAATTTGTTGCCTCTGAAGATTTCACTCCATCAAGATCTGCCAATCTTCAATATTCTGGCTAAATCTTGG-TATGTGGTTTTTAAACAGTCACTCCGTTT---------------------CAAAGTCTGTCTTTCCTTATAGAATG------TGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAGAGAA--------TCACTCTCCTT-ACCTAGTTATCTACAAATGTTCATTCCAGAAATGTTTAGTTACT-----GAATTGAATGAAGACATCTCAGTACACTCTTTTAGGTCATAGTAGTTGCCATTTTGTAAAATTTCTTTTTTCTTCTTTGCT------TTTTTCCCCTTATTTGGTTTAAT-TTTTCTAATG----TTAGGAGATA----------TAGTCCTAGATATTTCCATGGGCCAGTGTGATGACTTTTT----TTTAAATGAGGTTCAGTA----CCATAATGTTTATTTACTGGAAGAT------AATGCATTTATAAGCATTTTAAAATTCTGTAAAGTGGGTTAGAAATATTTATAATTTTACA---GGCAGGACAGCATTTGACTTTTATTTAAAAGGCGGCACTAC---TTATGTAAA-TCTGAGCTG-------TGGGATATTTCT--------------------------TGCTT---TAAGAGAGAGACAGAATC-TCTCACTGAAACTC-ATGGTCATGATTTTGTATAATATAGTTCATACTGTGTCTGTGAGTTTCTTCAGTTACAAATGGGCATTTAGTATAGTTATATTGACTATAACATGT-AAGTAAATAGCTTTCTACTG-----ACCCTAAGTTATCAAGGTGGAAAAAAAACATGCAATTCAGTAATTGAAAATGTGGTGAAAAGCTGCAGCTGTCATCA-TCAAAACAACTCATAACATACTTTAAAATGTTCAGGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGCTGGGTGATCTCTTTGCTGAATTAATGAGTTCTTAACA--TGTGGACC-----------CAACTGCCTGTGTGAGATCTGTGTCTTAA-----AACTTACTGGAATGGAAATCTATGAATTATTGCAAATTGTAATGCTGGAAACAAAAAATAAATCC----TTGGTTAAAGGGTTTGTAATGGTGATTTTTGACCCA-GAAATCTCATTTACTGGAAAATTGTGAGACTTTACGTTGGTGTATTTTTCTTTTTTTTTTTTTTACTATTACAGAGTATTTTGCATGCTGTACATTTTAAGTGAAATAACATTCCAGTTTTATTTTTAAGAT chr4 - 94230402 23996027 23996026 23997737 70232666 70232665 70234376 1711 taattttattattattttttttaatttCAGCAACGAAATCCTGATGTTCGTCACGTGGATTTGGAGATACTATAGACTTAGCAGAAGAAACCTTTAAGTTGATAGCTATTTGGGAAGAAGTCATATACGT---GGCTGAAAAGCTTCTGAAATGACAGTGACCTCAGCAGCATACCTCGCTTTAGCTTGCAGGCTTCCCAGACTGTTAGCTCCTT--AGACTGCTTCTTTTTCTGGAAGAGCATTAGATTTGCAGTCAAAAATTTCCATGACAAATCCACTTGA---------AAAGCTACTTGACTTAAATTCTGCTGGAGAATCTGTCTATTTACTGCAATTCAGAACTTCAGACTTGAAGTTTAGATGGGCAA----------ACGTAACTGCCTGAAAACATGCAGCACACTTAGTTTTTCCATTTGTGTCC----CTTTGCAGTCAGTTTGCACTTCTTTAGTTTCTTTCAAGATATCATTAAAGG---TTCTTGGGA----GATATTAAG---ATTAGCTATGATGAGTTTGTTCCAGTGGAACCTGCCAACCTTAAAC-TAATAGTTATATTTCAGCTGTGTGATTGTTTCACAGTTTTTCTTTTCTATGAGATGAATTCCTTCGAACAGGCGCTGACCTTCTCTCAAGTATGGTGACCTGGAAACCTTTTTGCCAC-CATTGCAATTACCAACAGCACATCAGGAAAAAAATCAGGTTGTTATCCTTGGTGGAGTCGGCTGTATGTGGTCAGCCAGAGGATATTGGGATACTGTGAAGAAAAAAATGTAGAGGTTTCAGTGAATTTCCTCTGTTTA----------AATTCTG------TTCTTTTTTTTTCCCTACTTCTTCATTTTTTTCTGTGTGTGTGTAAATATCTTCAGATGTAATTTGGGAGACACTTATGGTAGTGTTTATTGAAAGTTACCTGG--CATTTC--TGGCTTTTTATACTTTTAATAAG---CAGTATTGCCAAAAATGGTCA-TTGCTAGAAGATGTAAGAAATATATTTGGAGGTA----ATAATAGTCAAAAGTGTATTAGAAATATTTATAATTAAACACTTGAATACATTGTATTTTTTATTTATTTACTTGTAGGTATTTTCCATTATCTGAATTCTAAACTACTTACTTTGTGTTGTTTTTGTTTGTTTTTTTTTAAGAATTGCCCATGCTTGTCTGAGAAAGTGAAAGAATTGTATCAGTGGTCCTCAACGATCATGA-----GATAA-------------GTGCC--TAGACTTCATAACTTTGAAACCTGCA---ATTCTAGC-------ACTATACAAAGTCAACTTAAAGGCTTTCTGCAGTGGGCACCCAAGCCCTGCCAGATTCTTCAAGAAC---CAGTTGTTTAATAGAGGTTGTGATTTGAAATTTAAG-TGAAATAACTGAGGAAAATCCTTTGTGCACTTTAAAATATTTCAGCAA-AATGAGAATTCCTCGTGGGTGAGAGGTGGCGTTAAGAGCCTCCTACCGATTCTGTGA---CTGAACAATGATGGACTGTCTGAGAGGAGAGATGCTGATAGGAAACAGGT-CCTCAAAAATCAATTTATTAAGATGAAGCTACAAGCGTTGCAGTAAAGAATAATCATGGAAAC---CAATAAGTCCAGATTTGACTAAAAGCTTT-------TAATTTTTTTCATATTAAATGCAATTTACCAGTGAATTAGAAGAATTTATACTGGCATA-------------CCTTTTTGCAACTGAGAAGCACTTTGCTTGCTGGTCATTTTAGGTAGAAGAACATTCCAGAGGTTGTTTAAAGAT ....x.x:.x:.x......:..---.:...x.............x.....x..:..:..............:.::::..::::...x:..:.x::x:.x..:x::.--:....:..x....:-.:.x...---xx..:x....:...:x-------------------------....x.:.xx:..x:x..:.-----------.:..:x..x.--...x-..:.:.....:x:..x..:x:xx.x....xxx..x..:.---------:...x..x:.xx..---------...:.....--.....x.-...:x::..x.xx..::xx:..x.x.-.....:::..x.:xx.x:..x.x.:..xx..:..x..----------.:x...x.xx:.x.x..::.x.--..:.:..x:::.x.:..-x...:.x.----.......:...x:..x.x:..:..:.xx..-------.:..xx.x...:x.---.:.x.:...----...x..x.:---:..:x..x...x..x..:::....x::::.:.......:...x..:-.xx.:.:..x..:.::.-.:....:..x..xx.....:x:..:x..:---------------------..::xx...x.:...::.xx..x...------......::x...:x...:-.x...::...x:x.x.x.x:::::.:..:..--------.:::.x.....-::xx...::x..::.x:..x...x:.x::::..:..x:.x....-----...xx:....x...x:.:.....:x.:.:::.:x.x.:.----------x...:..------.........:...::.:..------.....::.:x.:.x..xx.x...-.:...x:...----..:.....:.----------.:x.:x.x..x.x..x.x...--..x.x:--..:......----...x...:..---.....----.x.x....x.:.-..:..:......------...::....:x.:.:.----.x...xx.xx......x:..................xx...---.:xx:x.:x.:....xx:x........xxx.xx..:.:.x:---....x.:..-...:.:..:-------..x.x.:...:.--------------------------.....---.:...:..x..x.....:-.x...x..:xx...-.:.:......-----x....-------------...:.--.::::...x.x.x..xx...:xx...---.x.x...:-------......xx.x..-..x.x..x:.......:.x.-----....x.:x::xx.x..:.xxxxx..:...---..:..xxx....x..::x....:.xx:..::.xx..-..xx..x.-.x.::.x..::.x.x::::..........:..:x:.:.:-.:....x...x:..:.:x.x..:x..:...xxx:x..x.::::.:.:..x.:x:...---..x....--x:.....:-----------x.:x...:x:.:x..:.:xx..-:..:..-----..:...:.:::...:.:x.x:.x.x:..::x.:...xx:....xx.......---x.....:...----...::....:.x...-------.:......xx.x:.-x....x:x......::.x:....:x:...x....:::...::..-------------::.....:.x.:.:x::..:.:.....x.....xx.......:..::..x..........xxx.xx...x..... 22M3I81M2I14M1I7M3D16M25I20M11I10M2D4M1I39M9I14M9D9M2I7M1I26M1I37M10D22M2I17M1I8M4D30M7I14M3D9M4D9M3D46M1D17M1I29M21I26M6I18M1D31M8I11M1I44M5I39M10D7M6D19M6I23M1I10M4I10M10I21M2D6M2D9M4I10M3D5M4I12M1D12M6I16M4D41M3I41M3I9M1I9M7I12M26I5M3I18M1I14M1I10M5D5M13D5M2D26M3D8M7D12M1I20M5I29M3D36M1D8M1I39M1D57M3D7M2I8M11I22M1D6M5I52M3D10M4I15M7D14M1I44M13D75M 923/1493 61.8% 1711/94230402 0.0% 348/1493 23.3% 18090028 NA +20296 chr4 + 190214555 42110916 42110915 42111481 566 TGCAAAAACCAAGTTAAAACACTTAAC-AGAGACTTGACATTTATTGTGCAATTTTATCCCCAACAGAACACGTGGCATTCTAGAGGTATATGAGGTAATAAAATCAACACTCCAATTAG----AACACCTGAAATAATTGGCT-CTAGTAACAAATGTCTCTTATAATTAAAAA-TATTGAATGTTTAAAAAACTTTTATAACATTTTA-AGTTTCTAAAAGAAATGAGC-CTAACACTTAAAAAACAACTTACTC-TTCTATATAAATTGTTCACAAAAAAATCTTGCTATTCTATATTACACTATGCATTTGTAGCTTTATTAACA----------------TATCCCTAGTGGGTATTAACTCTACACAGTACAATCA--AATAGAAATTATTCATAGAGAATCAACAAGACTCCAACAATAAAAATATCAGGATCAATGGATTT---GTCACAGTTTCTCCACAAGTATTCATCATAGAAAATAGAGTAAAGGCAACTCGGCCCCG------GTGTTAGGCTGCTACATGAAGTTCCAGAGAGG--AGAGACATAAA-GGCAAT--GCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCT chr4 - 94230402 24007208 24007207 24007794 70222609 70222608 70223195 587 TGCACAGAGGGAGACAGAAAAGTTAACCAGAGACC-AACTTTTATTGTGCATTGTTATGC--AACAGAACAAATGGAA--CTGGAGGTATGTA--GTAATAAAACCAATATTCAAATTAGGATTAACGCCTGAAATAGTAAACTGCAGGTAACAAATGTCT-TTATAATTAAAAAATATTGACTGTTTAAAAAATTCTCTAAGTTTTTTATATTTTTTAAAAGAAATGTGTGTTGCCACATAGAAAACAATTCACACATCCTATAGAAATTGT---CACAAAAACCTTACTAGTCTATATTACACTATGCACTT-----TTTTTGTACAATATCTGGTAAAGGTCTATCCCTAACCTGTACTTACTCTACACAGTACAATCATCGTTAGAAAGTATTCATAGA--ATTAACTACACCATAACAATAAAAATATCAGGATTAATGGTTTTTTAATCACAGTTTCTCCACAAATATTTGTCATAGAAAATATAGCGAAGGCATGTTGGCACAGATGGGCGTGCGGTACTGCTACACAAAGTTTGAGAGAAGGCAGATACATAAATGACAGTAAGATTAAAGAGCACGGA---GGGATAAGACAAGGATCT ....x.:.xx:..x:.:..x.x.....-......:-:..x...........x.x....x.--.........x:...x.--..:.......:.:--.........:...:.:..x......----...:.........:.x::..-.x:.............-.............-......x...........:.:.:xx.::x.....-.x...:...........x.:-:.:x...x..:.......:.:..x.-.:.....x.......---..x.....:...:...x..................:..-----...x.xx...----------------........::xx...:.x...................--:x......x..........--..:...x.x..:x:....................:.....x...---:.................:....::............x..::......xx.:...x.x.------...:x:x:........::.....:x.....:.--...x.......-.:..:.--.x:....xx..:.:.:---...x.:::...:x..:.. 27M1I7M1D24M2D16M2D13M2D25M4I20M1I16M1D13M1I34M1I20M1I25M1I15M3D38M5D10M16I37M2I19M2D44M3I59M6I32M2I11M1I6M2I16M3D18M 425/545 78.0% 587/94230402 0.0% 63/545 11.6% 18103708 NA +10763 chr4 + 190214555 42112961 42112960 42113235 275 TTATTTTTATCCAGCACTTACATGACTGAAAGCAGCCATCACTATGTTTACAAAAATACATCATAATGATACATACTGCTGTTTAGACACATTTACATTAGAGTTCTGACTCAAGCACTCCATTTGACATGTTTTGCCAAACAGTTCTGGCACGTGTTGCCACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAAT--CATTTTCTATTACATTTCT----AAAAATCTGTATATATGAGCTGTCAAAAATTAACGCAG---ATCTGTACTGTGA chr4 - 94230402 24008511 24008510 24008784 70221619 70221618 70221892 274 TTGTTTATCTCGTGTGTTTAAACACTGGAAAGGAACTGTCACAATGTTTACAAAAATACAGCAT---GATACATATCGCTGT--GGACAAATTTACAGTATAATGCTGACTCGCACGCTC----TGACATGTTTTACCAAGTAGTTCTGGCAAGTGTCACCACATAGAACATACACCAGCAAGACTTACACCATCTGAGCAATGTAACATCTTCTATAATAGTTCTCTTAAAAAACGTGTAAGT-TCAACACAGAAAAGCTACTATAGGATATCTGTACTGTGA ..:...x.x..xx.:::...x.::x:x.....x.:.::....x.................x...---........::.....--:....x.......x..x.:.x.......:x:.:...----...........:....::..........x....::......x:....................:......x..x....x:.--...:......x.:.x....----.....:x....x:.-.x.:.xxxx....::..x:::..---............. 64M3D15M2D36M4D81M2I19M4I14M1D23M3I13M 200/265 75.5% 274/94230402 0.0% 19/265 7.2% 18104450 NA +17371 chr4 + 190214555 42117367 42117366 42117922 556 TAAAATGGATTTCTATTTGGGTAC-----------------TGTGGCAGCTGAGAATGTGTAGACTATGGCAGAATG-------ACAGGCTTTGGACTCTCAGGTGAC---AGGAACAGGACATTCAC--AATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGA--TTCTGTCCACT------AATCCCCAGATCCATCCTGGGAACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAATGAGCCACCGTTGTGCAGGAAAGTCCCCACCGCCCGCCCCTGTCGGGCGTGACCGACAGCGTCGCTGAACACTTTGTTTATCTGCTCTTCCGAGGGCATCCACCAATCGGGGTTGGAGGTACAATGCATCCTAATGAATTCTGCAGGAATATATACAACATCAAAAAGAGAGAGAGAAAAAAACAGCTGGTTTTTGCAGAAGATG--------------------------------------ACAGGGCAGGCTGCTTAAACTTTAACAGAAGCTCTATAAGAAAAGCTTTATGGGAAATCCAACGCAATGCCATGATGATGTCACTCATTAGACCCAATTTA-TTCCATACAAATTTTCTTCTC chr4 - 94230402 24010589 24010588 24011176 70219227 70219226 70219814 588 TGAAATGGATGTTTTTTTCTGTAAATGAGGATATGATAGAATGGAGAAGCTGA-AATGTAT--------GCAGTATGTGTTCAAACATGCTTTGGACTCTTAAATGACTTCAGGGTAAGTATGCTTAACAAATAGTCTCTTCTAAATTAACCGCTTGCTACTGTTGTGTGAGTTTCCTCTCACTGCTGTCAATCACCAGATCCATCTTGCATACCTCTATTGAAGACTTCATCCTGTGACCCCGGATGGTCAGTCCCTTCGTAATATGAGTTCCCATTGTGAAGGAAAGTCCCCACTGCACGCCCCTGACGAGCGTGTCCTACCGCGTCGCTGAAGACCTTGTTGATTTGCTCTTCGGATGGCATCCACCAGTCAGGGTTGGAAGTACAATGCATTCTAATGAACTCTGCAGGAA-------------AACAGGTAAGAATACAAAAACCAGCTTGTCTTGGCAGCACCTGCTATCGCCCAGACACCAAAAGCCCATGGGAAATAAGAAACAGGGCATCACTGTTCTACTTAAGCAG---------AAGAAAAGCCTTATGGGA----------AATGCCATGATAATGCCA---GCTGGACCTACTGTACTTCTCTACAAGTGTGCTTCTC .:........x.:.x...xx...x-----------------..x:.x......-.....:.--------....x...-------...x............:.::....---...:xx..x.:::.:.x--...x.xxx..::.:.:xx:...:x:......x::x.x:x..--...:x::....------....x...........:..x:x..:.:...................x..xx..x.:..:..::.......:...x.....::x..:.....x..............:..x........x..:.....x..x..x...........x..:.....x..:........x..x...........:..:........:...........:........:..........-------------..x.:.x:...:x:x.....x.....x..:..x....x.xx..--------------------------------------........xxx:xx..xx....x.:...---------.........:........----------...........:...:..---::.:....:.x.x..-...:x.....:.x.x...... 24M17I12M1D7M8D8M7I24M3I17M2I41M2I11M6I225M13D43M38I28M9D18M10D18M3D15M1I21M 383/512 74.8% 588/94230402 0.0% 120/512 23.4% 18106778 NA +46620 chr4 + 190214555 42119970 42119969 42121123 1154 GCTGAACACTTGTACGGGGAGAGCCACAGCCAATGCGGTGAAATGAGATCACAGATGGTG-ACACTGAGCGGAAGGATGCAGTACCTCGGAGGCATGTTACTTTAACTGGATCCAGAGGGCGTCTTTCGGGACCTGTCTCTCCTGACTGCACTGACCTTTTCCTTTTCCCAAGGCCGCATGAGTACTTAAGCTCATCGGTTGTGAAAACAAATCTGATGAGGTATCGAAGGAGCCGTCTCCCATCTTTCTTTGAAGAATTTACAGCCTCATCCCACTGTTTGCTCGTTATGTAGACAGGATAGTTGTTCAACAGCTGCTTGCTTCCCTGGAAAAGCGAAATATTTTCTCATTACCCAC----CGAGCCAGCCAGCCAGAAGCAGAAGTGATCTCCATTTCAAAGGCAAACATGCTTTTTTTAACCAAGTGGCTATGCTGACAATGAACCAGGTATTGAAGTGCGCAAATAATTGCTCAGACTTAGAAGGGGCACTTTTCAAATTACATTTGCATTTTCTATAACAAGAGC-CAATGAGGTATAATGAACACCTTTGAAAGGGGAGCTATTTATAACTTACATTTTAACAGGTAGGTTAAAATGTGTCAAGATCCAATGACAGGGAACACTATTTAAATCTAACCTGTAACTTTCCTTTTCAATCTATTAAAA--TATGCAAAA---CTTTGAAGAGTGTGATCAAACAGGTCTCTTCAATTCTTTGGTTACTTTTAAGTACTTTTAGAAATGATGCTGGTGATCTATTT---TAATAAGGTT-TTACTTGTGTTTAACGCACCCAACACCTGGTAGTCACTGCATTACAACAGAAACATTAAAAAGCAAATTTTAAGAAGGGAGAATTGTGGAAACTGAAAAAAAAAATCACTAATAATCATGCAAAACAGGTTTCCTCAAATTATAGCTTCTGCA--AATGCCACTATGTCAACTCAAAATTTTTCTTACTTTTCACCTTCATAATTTACGTCTGCTATAAAATTCCCGGGCTAAATAGCTGCAGTGGGACTAATTACGGGAATTTCCGTAA-------CATTTATAAGCCATGTTTAATCAATTGCACCTACACAACC--ATTACTTTAGTTCTGGTTGTCCATAAAATTCTACAGTCCAGGACAAATTAATTAACCCATGATCTTAGTTTTAATATA chr4 - 94230402 24014067 24014066 24015191 70215212 70215211 70216336 1125 GCCAAATGCTTCTACTG----AGCCAGAGCCAATGCGGTGAAATGAGATCACATATGGTGGACACTGAGCGAAAGGATGCAGTACCTCTGAGACATGTTACTTTTACTGGATCCAGAGGACGTCTTTCAGGACCTGTCTCTCCTGACTGCACTGACCTTTTCCTTTTCCCAAGGCCGCATGAGTACTTAAGCTCATCGGTTGTGAAAACAAATCTGATGAGATATCGAAGGAGCCGCCGTCCATCTTTCTTTGATGAATTTACAGCCTCATCCCACTGTTTACTAGTGATGTAGACAGGGTAGTTGTTCAGCAACTGCTTGCTCCCCTGCAAAAAGGAAATATTT--CCATTGCTTATTTTACAAGGCAAACAGCTTGTGCCAGCTGCAAT---------AAAAAC--ACATGC--TTCTTAAACAGCTGG-GATACTGACAGGGAAACACACACCGAGGTGAACACATCATTGCT----CTTAG--TGGGTACCTTTTCAATTACATTTCCATTTTTTATAACTGCAACTTGGCAAGGTGAAAGGAACACGTTTAAGAGATG-GCTACCGATAATTTGCACTTCAGCAAGTAGGTCAAGAACTGCTGAGAACCAGCGACTGGATATACTATTTAAATATAACC-------TTCCCTCTTAATCTGTTAAAACGCATGGAAAGGGTCTTTGAAGAGCATGATCAAATGGATCACTTCA------CAGCAGCTGACAGTTTTCCTCAGAGGTGGCTCTTTTGGTCTATTTTTATAATAAACTTATCACTTCTGTAGTGCACACCTGAAACCTGACAGCAGTTACATTACTGT-GAAAAAACATAAAGAAAAT----AAATAAAGCAACTATGAAAACT----AAAAGCTTCATTACTATTAATGAATGCCATATTAACTCAAATTACAGCTT-TACAGGAATGCCACCGTGTCAGCTGGAAAGAAATTTTGCTTTTAACCTTTGTAATTT--GTGTGCTTTAATATTCCAACATTAAATGAATGCGGAGGGACTAATTATGGGGATTCCTGTAATCCACACCCATTATAAACCCTCTTGAGTCAACTGTACCT---CAATCGTGTTACTTTCATTCTCGCCTCCTATAAAATGCTACAGTTTGGGATTAGTCAATTAATATATGATGGTGCTGTTGATACA ..::..::...x...x.----.....x..........................x......-..........:................x...:...........x..............:........:............................................................................................:..............:.x:..............x..........................:..x..x...........:..........:..:.........:.....x....:x.........--:....:.::.:----.:..x..:x....:x.x:x...xx.::..---------...::.--......--..:....x..:x...-x..:......:x...x..x::.::..:...x:..x..x......----.....--x...:..:...:x..........x......:......x:x.:.-:::::....:x..x......x...:.:..:x.-....::x....:..:..:..:.:..:......:..:.xx..:::...x...::...x..:x.:...........x.....-------....:.:.:.....:......--:...x...:---..........::........::.:..x.....------::.:x:..xx:.:x.x:::.:...::..::x..xx..:.......---......:x..-.:....x...xxx:.:....::.x.....::..:x::.:......x::-....x.x:.x....x....----.:.x::::x..:.:..:.....----....:xx...:..x..x.x...x.x:x..x:..xx.........:.....-.:..--........::.....:..x:...xxxx.:..:.....x.....::......--..x....x...x.....x:x::.....::x...:.x...........:...:...:.:....-------.xx......:..x.x..x.:....:..:....---...:.--:.......x:....x.::x:.:.......x.......:::...:x.:.:......:x:.....xx.:x.x..:...:. 17M4D39M1I284M2D11M4I29M9D6M2D6M2D15M1D44M4D5M2D43M1I32M1D80M7D21M2I9M3I32M6D45M3I10M1I48M1D19M4D22M4D50M1D4M2I51M2D62M7I32M3D5M2I78M 825/1099 75.1% 1125/94230402 0.0% 81/1099 7.4% 18105903 NA +8682 chr4 + 190214555 42125579 42125578 42125726 148 CTACCTCTGTCGGCTGGTCAGCTGGCTGTGGTATCAGGAGTTGGTTGTGGTGCTGCAGAACCATCTTCAAGTAATCTAAAACGGTCTGGCAGGGCACTGGGTGGAAGAAATGGCAACAATTACACATTGGCTATCCCGTAACATGAAA chr4 - 94230402 24017843 24017842 24017987 70212416 70212415 70212560 145 CTACCTCAGTCGGATGGTCTGTTGGCTGTGGTACCATAAGTTGGTTGTGATGCTGAAGCACAGTCTTCAAGTAATCTAAAACAGTCTGGCAGGGCACTGCATGAAACAAATGGCAATTACTGTATATTAGCCAGC---TAGCACAAAA .......x.....x.....x.:...........:..x:...........:.....x..x..x:...................:................x:..:..x.........:x.:.::.:...:..:.x.---..:..::... 135M3D10M 116/145 80.0% 145/94230402 0.0% 3/145 2.1% 18107736 NA +39594 chr4 + 190214555 42143414 42143413 42144105 692 ATATGGCAGGA-------TACCTGGGATGCTCTCTAATTTCCTTCTGAGCTCTTCATTTTCTTGTTGCAGTGAAATAACCTCCTGCTCCAGCTCTTGGCATCGAGGACAATAGCCTTCCTCGTCCTCCTCCTCCTCCTCTTCTGGCAGTGTAGATGAAGATGGGTGGCCATGGGATTCGGACGTTGCTGGGGAAGTCCAGCCACCTAATGTATGCACAGGAGAGGTTGACAGAGGATCCACGTCGGCCAGATGGCCATATTCACTGGCTGACGAGGGGTTTGGAGTTGGAAAGCTTCCCGAGAGCAGGTAATTTTGTAGAGAGTCAGTGAAAACCCTCAAAAAGGCAGAAGTTTGTTGTTTCCTTTGCATATACTGCATCTCTATGTCTACATTGTCTGAGGTCTGACTGTGGACCCCTTTCCCAATGTGACAGTGCTCCTGTCTTTCGTTGTAACTTGAGCCTTCCTGCTTTACGCAAGAAATCATGGACTGAGAATGGTTGGAGTCCAGGAGTTTTCCTCCACAATTTAAGAGGCTAAGAACTCGACTGCACTGCTGGGCAAAGGCATCCAAGATCATTCGACTCTCTGAAACAAATGAAAGGACACAT--CAGTGACCAA--------------CAGCCAACGGCAAA-AGATAAATAAAGTCCTCAATTTTCAGCTTAACATTCA-----------AACATGTTAAAAATATGTATTTCTACT chr4 - 94230402 24029769 24029768 24030492 70199911 70199910 70200634 724 ATATAGCAGGGGATTGTTTACCTGGAATGCTCTCCAGTTTTCTACGAAGCTCCTCATTTTCTTGTTGCAATGAAATTACCTCCTGTTCAAGCTCTTGACACCGAGGGCAGTAACCTtcttcttcctcctcctcttcctcctccGGAAGCGTAGAAGACGATGGGTGACCGTGAGATTCAGAAGTTGCTGGAGATGTCCATCCACCTAAAGTGTGTACTGGAGAGGTTGAAAGTGGATCCACATCTGCCAAATGGCTAAAATCATTTACTGACGAGGTGTTCTGAGAAGGGAAGCTCCCAGAAAGCAAATAGTTCTGAAGGGAATCAGTAAAAACTCTCAGAAAGGCTGAGGTTTGTTGTTTCTTTTGCATATACTGCATCTCTATGTCTAAAATGTCTGACGTCTGACTATGGACCATTTTCCCAAGCTGACATTGCTCTTGTCTTTCACTATAATTTGGGTTTTCCTGCTTTATACAAGAAATCATGGACTGAGAATGATGGTTGTCCAGTAGTTTTCCACCACAATTTAAAAGACTTAGAACCCGGCTGCACTGTTGGGCAAAGGCATCCAGAATCATTCGACTCTCTGAAACAAAAGAAAAGATGAATCACAGAAACCTAACGCAAAGTTATGCCAGGCAGCAGCAGCTAGATGACTGTATGCAACCATTTACAG--TAGCATGCATTTTATTTCTGAACATATTAAAATTATG-GCTTCTGCT ....:.....:-------.......:........:.:...:..x.x:.....:................:......x........:..x........:..:.....:..:..:.....:..x...........:.....:..:..x..:.....x..x........:..:..:.....:..x........:..x.....x........x..:..:..x...........x..x........:..x....:.....:.x.x...:.x:.........x...:x...xx..:.....:..x..:....::..:..:..x..:..:.....:.....:....:......x..:............:...........................x.x.......x........:......x:........xx.....x.....:........::.:...:...:.::...........::.......................:.x.xx......x........x...........:..:..x.....:..:........:................::.......................x....:..::x..--...x:...x.--------------...x..:.:...:x-....:.x.:x.xx.xx.x....x...--..:...x..-----------.....:......x....-::....:.. 11M7I593M2I10M14I14M1I26M2D9M11I17M1D9M 553/689 80.3% 724/94230402 0.0% 38/689 5.5% 18113645 NA +3621 chr4 + 190214555 42144378 42144377 42144437 60 GGCTTAAAGCAATCATTACTTC-----TATTTCTGGAGTGCCCTCATGCCCTTGCTATTAATCAG chr4 - 94230402 24030514 24030513 24030578 70199825 70199824 70199889 65 GATTTAAAACAATCCTGACTTCGCTTCTATTTTGAGAGTGCCCTCGTGCCCTTGCTGTTAATCAG .::.....:.....x.x.....-----.....:x:..........:..........:........ 22M5I38M 50/60 83.3% 65/94230402 0.0% 5/60 8.3% 18113864 NA +9189 chr4 + 190214555 42146524 42146523 42146821 298 ACCAAATAATAAGAAAGCCAACAGCTGAACTA---TACAAGTAAGAGGTTTAAGATGCTACACTCATTTTTTTACTTCCTGGTTTC---TGTTCTTTTATTAGTAAAATCAAAGGATGATATTGATTGGGAATTTTCAATTCTAGCACAACAGCAGTTTT-CATTCATTTTAATCCTATAATCCCATTCTAGACCTGAAGTTGTATTTACTGTTTGCATTTTAATCAGCATAGTCCCAATTGAT-------TTCCCCTATACACCTTTAACATAACCTTGATG-AAAGGGACAAAATATGAAAGTCTAAAACA chr4 - 94230402 24032181 24032180 24032481 70197922 70197921 70198222 301 ACCTATGAACAAGAAAGTAAATTGTGAAACTAAAATACCACTAACACTCTCAACTTG-TGCTTTCTTTGCCTTATGTCTTTACTTCACATATTTTCCCTTTAAAAATATGAAAGGAT---ATTGATTGGAACTTTGCAATCCTACTACAG-AGCAGTTTTTCATTCATTTTAATCCTATAATCCGATTCCAGACCTGAAGTCATATTTACTGTTTGTATTTTAATCATTATGGTCCCTGTTGACAAAACAGTTACTCAGT---TTTTTTGCATATCTTTCTTGCAAGGGGACGAAAAATGAA----TGAAACA ...x.xx..:.......:x..:x.:x:.....---...x.x...x.xx:.:..xx..-.:.x:..x..x::...:x..:.x::...---.:..:.:::x...:x..x..x.......---.........:.x...x....:...x:...:-.........-.......................x....:...........::.............:..........x:..:.....x:....:-------..x.:.x:.---::...x:....x.:..xx..-..:.....:...x.....----.:..... 32M3I22M1D28M3I28M3D30M1D9M1I83M7I9M3D20M1I18M4D7M 209/286 73.1% 301/94230402 0.0% 27/286 9.4% 18114343 NA +54118 chr4 + 190214555 42148252 42148251 42148922 671 AAAAAATGCCATCCAATTTTTTTCATAATGGCAAACATCAACACAGCAAAACAGGATGGAATTTTTCTAAATAAATAAATCAATGATGTGTCAAAAATTAACAGATGAGTTAATATACTCGGTGCTATCAAAACCAGATGGTGCTTCCTAATATTCATCCTGCTCAGTCAATCCCTGAATATTTTCTGGACCATCGGTATATAAAATAGGATGCTGCTATTTGTGATGGCAAACAAAAGCAATCATGCCTGCCAAGCACATACTATAACAGGCAGCATTTCAGCTCTGCTAGACAGAAAGTAATTAGAATGCTTTTAATGTCCAAAAGAATGATGCTGATAGGCTGCCACAGATGTGTAGATTTATGAATATTTATATGGTGGTTTATAGCTGACACTTTTATCAGTTGAAGAAGATAAAATATCTGCCTGACTCAAAAGCTTGACAGTCAGGTTAATAAAATCTCATTAAAGAGAATGACCTATGCAATTATATAGGATTTATTATAATTCATTTTTGATTGTACTCTGCTTAAAGATGCAATTTCCCATTTCCTAATGCCAAATTTAGGCTGCATATCAAGATCTACGTGGGTTTTAACTCTAAGCCTCCCACAGAGGAAAAATATGCTTTTAAAACCATGGTGTATTACCCCTTTTAAGGAAAATTAT chr4 - 94230402 24036085 24036084 24036753 70193650 70193649 70194318 669 AAGAAATGTCATCACATTCGTT--ACAAAGGCAAACAGCAACATAGCAAAACAGGATCCAATTTTTCTAAATAAATAAATCAATGATGTGTCAAAAATTAACAGATGAGTTAATATACCCGATGTTATCAAAACCAGATGGTGCTTCATAATATTCATCCTGTTCAGTCAAACCCTGAATGTATTCTGGACCATCAGTATATAAAATAGGATGCTGCTATTTGTGATGGCAAACAAAAGCAATCATGCCTGCCAAGCACATACTATAACAGGCAGCATTTCAGCTCTGCTAGACAGAAAGTAATTAGAATGCTTTTAATGTCCAAAAGAATGATGCTGATAGGCTGCCACAGATGTGTAGATTTATGAATATTTATATGGTGGTTTATAGCTGACACTTTTATCAGTTGAAGAAGATAAAATATCTGCCTGACTCAAAAGCTTGACAGTCAGGTTAATAAAATCTCATTAAAGAGAATGACCTATGCAATTATATAGGATTTATTGTAATTCATTTTTGATTGTACTCTGCTTAAAGATGCAATTTCCCATTTCCTGATGCCAAATTTAGGTTGCATATCAAGATCTACGTGGTTTTTAACTCCGAGCCATCGCCAGAAGAAAGATACGCGTTCAGCATCTCGCTATCTTACACCTCGCAGGAAAAAATAT ..:.....:....xx...:x..--.:..x........x.....:.............xx...........................................................:..:..:......................x..............:........x........:.x............:.....................................................................................................................................................................................................................................................................................................................:..................................................:..............:.....................x.........::....x:.xx....:....:...:..x..:.:x.:.x:.x.:.x....x...:x:.:.:....x... 22M2D647M 618/669 92.4% 669/94230402 0.0% 2/669 0.3% 18112167 NA +14706 chr4 + 190214555 42153812 42153811 42154327 516 ATATAAGTATTTGGGAGTCCAGGAACTGTCAGGGCTGATTAGGGCATAGAGGACATTTTCTTTCTCATTATGC-AAAAGCATTTCATGGGGAAATAA-AAGAGGTTTCATTGTAACTCATGCATGTCATATTTCAAGGAATTCAAGATATTAATCATATTTAACATTATTTGCAATGT-TTCTCCCTGGCTTCTGAAAA---CTGCTAAATGAGGACACGTGGATCACTAGGAAAAGGAGACAAGCATG---------------AGAG-------GGACAGTTAAGAAATAATGAAATGCTGGTGAAAGAGAAA--GAGAATGAGATGCCA--GGGAGATGTTTCTTAGGCACGTAAGTGAGAAATGGGGGAGCTACTTCTGAGACGTGAGACAGCTGAAATTGAATGATATACTGGAG-GAAATAAATGATAACAAAC--------CTCCCCACACTTTCCTTTCTATAAAGCAGTTCTGAATTTTGCATTGAAATG----TTTTCC--TCCCACTTTACTCCCA----------GATAATTTGC--------CAATAAGTC--CTGGCTTTTGAAAAGAAA chr4 - 94230402 24038207 24038206 24038758 70191645 70191644 70192196 552 ATAAAAGTGTT-GGGAGCGCGGGACCCGTCAGAGTTGATTAGGGAGCAGAGGACATTTTCTTTCTCGTTACGCAAAAAGCGCTTCATGGCGAAGTAACAAGCGGGTCCGCCGTAATTCGTGCGCGTCAGATTTCCACGAATATGAGAGATTCATCGCGCTTAGCGTTATTTGCAGCGTGCCCTCCCCGGCCCCCGAAGCCGTCCGCTCGGTGTGAA---GTGCTGCACC--------GAGCTGAGCCCGTCCCTCTGCCCGCCCGGAGCCTTCCAGGGCAGTTCGGCAATAATGAAATGCCGCTGAGAGACAGCTTGAGAATGAGATGCCATCGAGAGACGGCTC-------------TGAGAAATGGAGGAGAT-CTGGGGAGATG-GAGACAGCTGAAGCTGAGTGATACGTTGGAGAAAAATAAACGATAACAACCCGCTCGCTCTCCCCA----TTCTTTTCAGCGAGGCGATTTGATATTTTGCATTAACATTTCCCTTCTCCTGTCCCACTTCTCCCCTGCTTTTGCTGCTGTAATTTATCAGGATTACAATAAGCCCTCTGGCTTTGGGAAGCAAA ...x....:..-.....:x.:...x.:.....:.:.........x::...................:...:..-......::.......x...:...-...x..x.:.:::....:..:...::....x.....x.x....x::...x...x...::::...:.:.........::..-::.....:...::.:...:x---.:...x::..x.:.---...xxx...:--------...x::...x:.---------------:...-------..:.....x:.x.............:.x...:...x.:x--...............--.:....:.x:..-------------..........:....x.-..xxx....:.-............::...:.....:::.....-:.......:........x.--------.......----...:....x:::.:..::..:x:x..........:.x..x----..:...--........:x.:..::----------x:......::--------.......:.--........x.:..:x... 11M1D61M1I23M1I80M1I20M3I14M3D10M8D12M15I4M7I39M2I15M2I12M13D17M1D11M1D31M1I19M8I7M4D40M4I6M2I16M10I10M8I9M2I18M 358/485 73.8% 552/94230402 0.0% 98/485 20.2% 18115605 NA +3191 chr4 + 190214555 42155019 42155018 42155075 57 ATCTCAAAAAAAAAAAAAAGAGAGAGAGAGAGTGAGAGTGAATTTTGAAAAGCCAAG chr4 - 94230402 67652101 67652100 67652157 26578246 26578245 26578302 57 ATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATTGCCAAGAGCAAAG ..x:.............:..............x..:.x.::...x:x..:...x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -25497082 -68733320 +3069 chr4 + 190214555 42166672 42166671 42166743 72 CTACAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCGGGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:x.:xx.x..:.:.......x.:xx...x.xx.x........:..::........:......x.:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 23969546 NA +22021 chr4 + 190214555 42167616 42167615 42168011 396 ACTTTAGCTGTTTAATTTGAAGTTGGCTCAGTAGCTCATGTTTATGGATAAATGAGCAAAACATTAAAGATCAAAAGCAAAAAATAAAATTACTATGGAATTCAATATTTCAGAAGCTGGAGCCGGGTAAATGTTACTGAAGTGTGGCATTCAAAACGAAAGTTCCCCACTTATGATAATGCACCTAACAAGGAAATGAGATTGACACAGCAATTCTCTG-TTTTGTTGTCCCCTGAGGTTAGAGATTATGCAGTGCATGTTTCTGTTTTTAGTTTCTTTGGTAATTCCTGTGGTGAGAGACTACACTCTGCATATTTGTCACGGTTGCACTTCTCTCAGGTG-CTGGGGTCTTTGAGGTAGCGCAGGAAATGCCGTTCTCATCTGAGCCTTGAATTC chr4 - 94230402 24040969 24040968 24041359 70189044 70189043 70189434 391 ACCCCAGCTAGTTAATTTAAGCTTAGCTCAGTTGCTCATGTTTATGGATAAAGAAACAAAAGAGAGAGCATCAAAAGGAAAAGATGA-----CTGTGGAATTCAATATTTCAGCAGCTGTTGATAGGTAAATGTTATTGAAGTGTGGCATTCAAAACCAAAGGCCTGCATTTATGATAATGAGCCTAACAAGGAAATGAGATTGACACAGCAATTCTCTGTTTTTGTTGTCCCCCGAGGTTAGAGATTATGCAGTGCGTGGTTCTGTTTTTAGCCTCTTTGGTGATTCCAACTGTGAGAGACAGCACTGTGCACATTTGTCAAGGTTGTGCTTCAGTCGGGTGACTCAGGAGCTTGAGG-GGAGCACGGACTGCTGGCCTCACCTCA-CCTTGAGCCC ..:::....:x.......:.:x..:.......x...................x:.:.....x.xx:.:x........x....:..:.-----..:..................x.....xx.x::...........:....................x....x:.:x..:...........x:.....................................-.............:......................:..x............::........:.....x::x.........x:....x....:........x.....::....xx..:....-..x:..xx:......-:.x...x.:.x...:.x:....:..x.-......:::. 87M5D128M1I122M1I15M1D27M1D10M 313/389 80.5% 391/94230402 0.0% 9/389 2.3% 18126647 NA +3754 chr4 + 190214555 42180182 42180181 42180253 72 CTGCAACCTCAGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:x.:x..:...........x.x...x.xx.x........:..x.........:......x.:.. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 23983056 NA +3128 chr4 + 190214555 42193634 42193633 42193716 83 TCTTCCTTTGCA---TTTCTTCTGCCTCCTCCTTTGCTGTAGTATGTTTGGATGGTTTCTTGTCATCTCGTTTCCTTTTTCTTATG chr4 - 94230402 22440022 22440021 22440107 71790296 71790295 71790381 86 TTTTCATTTGTGAACTTTCCTCAGTGTGATCCTTGGCAGCAGTATATTTTGATGGTTTCTTATGGTCTTTTTCACTTTGTTTTGTG .:...x....::---....:..x.:x.xx.....x..x.:.....:...x...........:.x:...:x..:x....x.:..:.. 12M3I71M 58/83 69.9% 86/94230402 0.0% 3/83 3.6% 19753612 NA +3128 chr4 + 190214555 42193634 42193633 42193716 83 TCTTCCTTTGCA---TTTCTTCTGCCTCCTCCTTTGCTGTAGTATGTTTGGATGGTTTCTTGTCATCTCGTTTCCTTTTTCTTATG chr4 - 94230402 22427587 22427586 22427672 71802731 71802730 71802816 86 TTTTCATTTGTGAACTTTCCTCAGTGTGATCCTTGGCAGCAGTATATTTTGATGGTTTCTTATGGTCTTTTTCACTTTGTTTTGTG .:...x....::---....:..x.:x.xx.....x..x.:.....:...x...........:.x:...:x..:x....x.:..:.. 12M3I71M 58/83 69.9% 86/94230402 0.0% 3/83 3.6% 19766047 NA +26065 chr4 + 190214555 42211550 42211549 42212223 674 ATAACATTAAAAATATTTCTCTTAGCAGGATGCGGTGGGGTTGTTTTCTTTTTTAATTTCAAATAACACCACTCCTTGAACTGGGAACAAACAATTCACTTGCAGCTCGGCTCTGCTTTTATTTGTAATTTTCACATAAATCAACTTATATGAAAATGTATTCATAATTTGAGCTTTCTCTATAGCGATAAAATGTTTCTGCTTCTGTGGTAGAAAATAGCTTATTATGCAAACAACATTGCCACTCTTACATTATGCATGGGATTTACCTGGAGAACATCACAAAAGCTTCAGGAAAAA---AAAAAGCCAGGGAGGGTGTAGTAGGGTGCTTCGTTTACTGCACCATTTACCTATAATAATTAGCTACAAATGAACTAATATCTGTATTTAGCAACTTCTTTAATAT-TGCTTTGGTTAATTCAGTGAAACAATGGAGAAAAAGAAAAAAATACAAGG----GAGGTCTCCTGACAAATGGTGCCTTTCAGGATGTCAGCTCCATGAAAAATGAGATCTGGTGGTTTCAAACTTAGG--CCAGTGGTGGTGAGTAATTAATGGCCAACTCATTTGAACTTGTGT---GCTTGATCTAATTTGGGATATTGGGAGTTCACACTGATTTGCCTTTAAAAAG-AATGTCACTGTCAAATAAGGTGATTGTGTAAGATTGATATGGAGAA chr4 - 94230402 24054512 24054511 24055188 70175215 70175214 70175891 677 ATAATAATAAAATAATTTCCCTTAGTGGGATA---TACATTTCCCTTCCCCCTAAGTTTCAAACCACACTACTTCTTAAAGTAGGAACAAACATTTTACTTATGGCTAGAAT--GCATTTATTGGTAATTTTCACATAAATCAACTTATATGAAAATGAATTCATAATCCAAGCCTTCTCTATAGTGATAAAATGTTTCTGCTTCTGTGATAGAAAATAGCTTATTATGCAAACAGCATTGCTAGTGTTACATTATGCATGGGAGTCACCTGGAGAACATCACAAAAGCTTCAACCAAAAGGCAAAAAAAAAGAGGGGAGAAAATCGGGTGTTCCATTTACTGCACCACTTGCCTATTATAATTAGCTGTAAATGAGCTGATATCTGTACTTCGAAACGTGTCTCATATGTGCCTTGGTAACACTATACAAATAA--GAAAAGCAGAACAGAATGGAAGAATATGAAACTCACCAAGGAATG--GCCTTGAAAAATGTCATCCCAATTAAAAAGCAAA--AGCCGCTTTCCATTTTAAAACCTGTTAGTTGTATTTACTTTAAGAATACCTTCGTTATATTTTTATACCACTTGATTTAATTCAGGATGTTATGAATTCCCACCGGACTGTTTTTTATTTGAAATTGCATTGTCAAAAAGTTTGATTAAATAATATCTGTTCAGAGAA ....:.x.....xx.....:.....::....:---.:x:x..x::...::::.x.:.......:x....:...:...:..x.:..........x..:....:::...x.:x.--..x......x..................................x.........:::...:..........:.......................:.........................:......:.x.x.................x.:..........................:xx....---.....:xx..:.:..:x:x.:.x.....:.:.:............:..:.....x..........::......:..:.........:..x.x...x.x.:.x....-...:.....x.xx::.xxx...:..--..:..:x....x.:...:x...:----..:::::x.::.x:....--.....xx.::......x.:.x..x.....xx.:.--x.x:.x....x.x:...::--.::x.:..x..:xx..x..x.x.:x:.x..:xx..:x.:..x.:.---:......:.....::....:..:x..:...x...:.:x:..::...x.xxx.-...xx..:.......x.:xx.....:x:...x..:x:.x::..... 32M3D77M2D186M3I106M1I25M2D23M4I18M2D34M2D19M2I45M3I52M1I46M 474/663 71.5% 677/94230402 0.0% 25/663 3.8% 18157038 NA +3117 chr4 + 190214555 42215442 42215441 42215489 48 AAAAGAAAAAAAAGAAAAAGAAAAAGTTAAAAAAAAAAAAGATTTGTA chr4 - 94230402 69060827 69060826 69060874 25169529 25169528 25169576 48 AAAAAAAACAAGATAAAAAGAAAAAGTTTAAAAAAAAAAAGTTGTGTA ....:...x..:.x..............x............x.x.... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% -26845385 -67385017 +3211 chr4 + 190214555 42223574 42223573 42223626 53 TTTCACATTGATTCAAGGCTATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 - 94230402 9812701 9812700 9812753 84417650 84417649 84417702 53 TTTGACATTAGTTCGTGGGTATTTTTTTTTTGTTTTTGTTTTTTTTTTAAGAC ...x.....::...:x..x....:.......x.....x..........:.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 32410873 NA +3405 chr4 + 190214555 42243073 42243072 42243154 82 CTGCAACCTGCATCTCCCAGGTTCAAGTGAGTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGTGTGACACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..::x.x..:.::..........xx..x.xx.x........:..:.........:.:....x.:.-----...... 71M5D6M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 24045947 NA +3359 chr4 + 190214555 42257734 42257733 42257805 72 TATAGCCTGAC-CTTCCGGGCTCAAGAGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:....::.x-....:...:.....x.x.:.x.xx:x........::...........:......x.:.... 11M1I61M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% 24060607 NA +4334 chr4 + 190214555 42265335 42265334 42265434 100 TTATTCTAATGCAGGGTTATCCAATCTTCTGGCTTCCCTGGGCCACATTGAAAAAAGAAGAATTGTCTTGGGCCACACATAAAA----TACACTAACACTAATG chr4 - 94230402 9885846 9885845 9885949 84344454 84344453 84344557 104 TTGCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg ..::.:x...x....::.......:......x........:......x...:x:..x.:.....::..x....::..:x...:.----.:.x..:.x.x..... 84M4I16M 71/100 71.0% 104/94230402 0.0% 4/100 4.0% 32379489 NA +8120 chr4 + 190214555 42272270 42272269 42272578 309 TCTCACTCAACCTAAAGGGCACGGCTATA-ATAGAGAAAATGAGTGTCTGCCCTGA-ACAGCCAAGATAACCTTGAAGGGAATAAATGAACATGCATATTGATGGAGCAATTTGAGTACATATTGATTCCTGGTAGCTGGTGTCTGTATTCTTAGCTCATATAATAGGTAGTAGGAGTTC--TTATAAATAAGCCTACAGAATACTTTTTTTTAAGAAACTCAACCAACCTTTGGGAGATCTTGTTATTTTTATTTACAAATAATTGATGGAGAATGCAGTGTGGCCTATGGCTTGGTGATTATTGATTTTCA chr4 - 94230402 24059636 24059635 24059934 70170469 70170468 70170767 299 TCTTGCCTAGTTTAATATGCATGGCTATATATGGAGAAAATGTGTCTTTGTGCTGGCATAGCAAAGATAACCTTGAAGAGTATAAATGAAAGTACGTATTGATGGAGCAATTTGTGTTTTTATTGATTTCTTGCTGTGTCTCACTGAATTCCTAGTATGTAGAATAGGCTGTAACTATTTCATTATGAAGAATGCTACAGAATATATTTTCCCA--------CACCAATTCTTAAGGGACAAGGGCAATTTAG---ACATGAGAATACAAGAGAAAGCA-TATGG--TATGTATTGATTATTATTATTTATCA ...::.::.:::...x:x...:.......-..:.........x..x.:..:x...:-.:...x...............:.x.........x:.:.:..................x..x:x........:..x.:x.:xxx.xx...x....:...:x::..x......:x...:xx:..:--....:..x..xx..........:x....:::.--------x.....:::..::.:..:xxx.x:.x...x:---...x:x:.x.:xx:.....x...-.:...--....xx...:.x......:x..x... 29M1I26M1I123M2I32M8D31M3D23M1D5M2D26M 198/295 67.1% 299/94230402 0.0% 18/295 6.1% 18212634 NA +4605 chr4 + 190214555 42277755 42277754 42277925 171 ATTGTCTTGACCTCAGCTAAGC-CTCAGCCACTCAACTTTTCCCATCATTTCTCTCCTCGATGGAA-------ATAATGATTCTTATTCATCTACCTCACACAGATGTTGGACAGATTGATTAGTTAGTGTTCAAAAATTGCTTGGAGGATGAAAAGTGCTG---------ATTATTATTATTATGTT chr4 - 94230402 52461725 52461724 52461908 41768495 41768494 41768678 184 ATTCTGTGGCCTTGAGCTAAGCACGTAACCTGCCAGCAGTGCTTTTTTTTTCTTACCTCTCTGTAATACAGGTATAATAACACTTGCCCA----CCTCACAGACGTGTTGGGAAGATTAATTAGTTTATGTTTGCAAAATGCTTTGAAGATGAAAAGCGCTGTAAGTGCTAAGTAATATTATCATCTT ...x.x.x.x.:.x........-.x:.:..xx:..:.xx.x.::x.:x.....:x....xx..x..-------.....:.:x...:::..----.......x.x:......:x.....:.......x:....::x...x.....x..:.........:....---------.x..x......:..x.. 22M1I43M7I17M4D68M9I17M 116/167 69.5% 184/94230402 0.0% 21/167 12.6% -10183970 -84046432 +3034 chr4 + 190214555 42300115 42300114 42300192 78 CCTTCCTTCCTTTCTTCCTCCCCTCCCTCCTCTTTCTTTCTCCCTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTC chr4 - 94230402 18988818 18988817 18988895 75241508 75241507 75241585 78 CCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTC ..:.:x.x::..x...:...:xx...:x::.:.........:...:.........x...x.xx...:.x....:.x.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 23311297 NA +3644 chr4 + 190214555 42305289 42305288 42305403 115 TCCCCATTACTTATACTGTGTGACATTGGGTAGGTCACTTAACCTCTCTGGCCTTTAGTTTCCCCATCTCTAAAATGGAAGATGATAAAA-GTTACTCATGAGGGTGCCTGGTGGA chr4 - 94230402 11947205 11947204 11947314 82283089 82283088 82283198 110 TCCTCACTA-----ACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAAT-GATTATAATACAATGCTAACCTTGAAGGAACTTTGTGAA ...:..:..-----..........x..:...x:.........:..x:...xx::::...........x.x.:....-..xx..:...x..-.:..x:.x...:..x:.:.x...:. 9M5D62M1D13M1I25M 77/109 70.6% 110/94230402 0.0% 7/109 6.4% 30358084 NA +3259 chr4 + 190214555 42309077 42309076 42309159 83 CTGCAACCTCCGCTTGCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTTGCTGGGATTACAGGTACCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x:.x.............x...x..x.x........::::...x.....:.:....x..:.--:....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 24111951 NA +3414 chr4 + 190214555 42315897 42315896 42315968 72 TAGAGAGAAAGACAAAGAGACAGAGTCAAAGAGAGAGAGAAAGAGAGAGGCAGAGAGAGAAAAAGACAAAGA chr4 - 94230402 39639921 39639920 39639992 54590411 54590410 54590482 72 TAGAGAGATACAACAACAGATAGGATGAAGGTGAAAGATAATGAGAGAGACAGGGAGAAAAAAAGACTTAGA ........x.x.xx..x...:..::.x..:.x..:...x..x.......:...:....:........xx... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 2675976 NA +3305 chr4 + 190214555 42316351 42316350 42316392 42 TCAAAACAAAACAAAACAAACAAACAAACAAAAAAAGCAAAA chr4 - 94230402 81661608 81661607 81661649 12568754 12568753 12568795 42 TTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAA .:....x.............................:..:.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -39345257 -54885145 +3185 chr4 + 190214555 42316353 42316352 42316398 46 AAAACAAAACAAAACAAACAAACAAACAAAAAAAGCAAAAAGGTAG chr4 - 94230402 38540321 38540320 38540366 55690037 55690036 55690082 46 AAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAG .....................:............:x.xx....x.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 3776032 NA +3715 chr4 + 190214555 42326572 42326571 42326683 112 AAAGAAGGATGAAGAAAGAATGGAAGGAAGGAAGGACAGAGGAAGGAAGGAGGAAGGAGGGAATG--TTGAAGGAA--AGAAGGAAGGGAGGAAGGAAGAAGGAAGGAAGGAGGAA chr4 - 94230402 12888295 12888294 12888410 81341993 81341992 81342108 116 AAAGTTGGGTGAAAAAATAAGGAAGGAAAGAAGGGATTGAGGAAGGGAGGGGACAGGTAGAGGTGTCTTGAAGAGATTGGTAAATAGGCAGAAATGCAGAAGTAAAGAGGGTGGGA ....xx..:....:...x..x.:.:.:...:.:...:x........:...:.:x...x:.:::..--......::.--:.x.::x...x..:..x.x.....x..:..:..x..:. 65M2I9M2I38M 74/112 66.1% 116/94230402 0.0% 4/112 3.6% 29438277 NA +3494 chr4 + 190214555 42326651 42326650 42326740 90 GAAGGGAGGAAGGAAGAAGGAAGGAAGGAGGAACAAGGGAAGGAAGGAGGGATGGAAGGAAGGATGAATGAAGGAAGGAAGAAAGGGAAA chr4 - 94230402 67772341 67772340 67772430 26457973 26457972 26458062 90 GAGAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAAAAAGAATGGGAAA ..::::...:x.:.x...:..:.:..x...:....:..x.:.::.:x.::.xx........:::x:.x........::.....x...... 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% -25445690 -68784712 +3148 chr4 + 190214555 42357211 42357210 42357320 110 AAGAAAGAAAAAAGAAAGATAAAGAAAGGAGAGAGAGGGAGGGAGAGGAGAGGGGGAGGGAGGGAGGCGGGCAGGGAAGGAAAGGGAAGGGGAGGGAGGGGAGAAGAAGG chr4 - 94230402 11253653 11253652 11253762 82976641 82976640 82976750 110 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAG .....::..x:...:....xx..x.....:..xxx..:x..::.:....:...:.:::....:..x.x.:..x:x:x.::..:x:..x..::.:.x...:..:.x:..:. 110M 64/110 58.2% 110/94230402 0.0% 0/110 0.0% 31103558 NA +3359 chr4 + 190214555 42357293 42357292 42357354 62 AGGGAAGGGGAGGGAGGGGAGAAGAAGGGAGAGGAGGGGAAGGAGAGGAGAAAGGAAGAAAG chr4 - 94230402 87012026 87012025 87012086 7218317 7218316 7218377 61 AGGGAAGAGAATGG-GGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG .......:.:.x..-......:..::...:....:...:.....x.::.....::..:.... 14M1D47M 46/61 75.4% 61/94230402 0.0% 1/61 1.6% -44654733 -49575669 +3170 chr4 + 190214555 42357335 42357334 42357403 69 GAGAGGAGAAAGGAAGAAAGGAAAGAAGAAAGAAAGGAAGGAAGGGAAAGAAAGAAG---AAAGAAATGAAA chr4 - 94230402 44400497 44400496 44400568 49829835 49829834 49829906 72 GGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA .:....:.:::...:::..............:....:...:..x..:x.:...x...---x.::.....:.. 57M3I12M 49/69 71.0% 72/94230402 0.0% 3/69 4.3% -2043162 -92187240 +3591 chr4 + 190214555 42357847 42357846 42357926 80 AGTGAAACCTCATCTCAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAAGATCAAAAGGAGAGAGATGTGGCGAGG chr4 - 94230402 4077721 4077720 4077800 90152603 90152602 90152682 80 AGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCAAGAAGAGGGAACAGAGGCTGGG .......::..x...x.............x.:.....:.:..:.::.::..x:.x....:.:...:..:xx.x...x:.. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 38280126 NA +7670 chr4 + 190214555 42360173 42360172 42360528 356 TTTGGTTTCTTATCATTATAAATGATGGACTATCAAAGCAACAGCAAACCCATTAATCAAGACTGTAAACAATTAAAATCTTTTTCCAGATCCGGGAAAGCATCAGAATTATCAAGACAGTGCCAAAA--AAAGGAACATAAATTTCAGCCAGCCCTTTGGATCTGGGAAGTGTTTAGGCTACCCAGCCAAAAAGTCAGAGAGCAAACAGTCTAAACTAAGCTGATAACAACTGATCATTAATTAGAACTGAAGCCAACTATCTCAGTTTAGAGAAATATCTTGGCTACTCTGCTAAGAGCC---AGAAAGCCAAAGGTCCAAGTTGGGTTCATTATCATTAATCAT------------AGGCAAAGCCACTG chr4 - 94230402 24075697 24075696 24076043 70154360 70154359 70154706 347 TTTCACTCCTTGGTACCCTAAATAGTAGGATTT----GCAATAGC---TCTATTAATCAAAGAGATGGACGAATGAAATCTTCACACTATGCCAGGAAGACATCA---------AGTCAGTATCAAAATCATAACATTTTTAGTTAAAGCAGTTTATCTACACTTGGGAAACATTTAGACCACACAGCTGAAA-GTTAGAAACCAAACAA-CTGAATTAAGCTGATAACAAATGATTATTAATTAAGAGTGATATCAACAGTCTTGCACTGAAGAAGTTTCTAGGACACTGAGCCAAAAGTCTAATGATAGCCAAAGG--------AAGTTCCTCATAATTCATCATTAATTCCAACCAAGATAAGGTCACTG ...x::.:...:x:.::x.....::.:.:x.x.----....:...---:.:.........::xx:.::..:.x.:.......:x:x.x:xx..:....::.....---------..x....::.....--.x.:x.x:x.x.:..xx...x:x::x.:.:x.::......:::.....:.:..x....::...-..:...:.x......:-..:..:..............x....:........::.x...x::....x:...::xx:.::....:.x...x..x:...xx..:..:..:.---x..x.........--------::....x.:..x...x.....------------..::..:.:..... 33M4D8M3D57M9D14M2I63M1D16M1D91M3I13M8D21M12I14M 213/330 64.5% 347/94230402 0.0% 43/330 13.0% 18284476 NA +3782 chr4 + 190214555 42364712 42364711 42364869 158 TCTCTCTTCTTTCTTTCTCTTTCCTCCTTCCTTCCTTTCTCTCTTTCTTTCTTTCCCCTTCCTTCCTCTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCTTCCTTCCTTTC---TCTTTCTTTCTCTTTTTCTTTCTTTTCTTTCTCCTCCTTCCT chr4 - 94230402 92912892 92912891 92913052 1317351 1317350 1317511 161 TTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCTGCT .:...:::.x:.:x.x....:..:...:...:....xx...x:..:.x:.::.:x:::.xx..x::...:..:......:..:..:.....:..:.xx.:..x:.::x:.x:...x---.......::x..:..xx...x:x.x:..:...x...::.x.. 116M3I42M 91/158 57.6% 161/94230402 0.0% 3/158 1.9% -50548180 -43682222 +3125 chr4 + 190214555 42364721 42364720 42364854 134 TTTCTTTCTCTTTCCTCCTTCCTTCCTTTCTCTCTTTCTTTCTTTCCCCTTCCTTCCTCTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTTCTTCCTTCCTTTCTCTTTCTTTC------TCTTTTTCTTTCTTTTC chr4 - 94230402 24861593 24861592 24861728 69368675 69368674 69368810 136 TTTCTTTATC---CCTATGTCATTTCTTTCT-TCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTTACAAGCCTTTAATCTATAACCCTGCCGTGTCACCTTTCCCTTTCTTTTC .......x..---...x:x..x..:......-..::..:x:.x...:..::.:..............:.:.....::x.::x..:xx....x:xxx:.:..xx.:.x.xx::..x:.------:....::.......... 10M3D18M1D85M6I17M 83/130 63.8% 136/94230402 0.0% 10/130 7.7% 17503128 NA +3105 chr4 + 190214555 42364739 42364738 42364791 53 TTCCTTCCTTTCTCTCTTTCTTTCTTTCCCCTTCCTTCCTCTCTTTTCTTTCT chr4 - 94230402 17388732 17388731 17388784 76841619 76841618 76841671 53 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCT .:....:.xx.......:.......:...:...::....::....x....:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 24976007 NA +4792 chr4 + 190214555 42364761 42364760 42364957 197 TCTTTCCCCTTCCT-----TCCTCTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTTT--CTTCCTTCCTTTCTCTTTCTTTCTCTTTTTCTTTCTTTTCTTTCTCCTCCTTCCTTCCTCTTTCTCTTTCTTTCTTTTTCTTTTTTCCTTCCTTCCTTCC--TCTTTCTCTTTCC-----CTCCCTCTCTCTCTCTCTTTTTCCCCTTCC chr4 - 94230402 34857649 34857648 34857859 59372544 59372543 59372754 211 TTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCTCCCGGTTTC .:.....:...x:.-----.x.:..:.x..x......:..x..x:.x.:..:.....x.--...x.::::..x:.x:.x:....:.....x:.x.:....::...:..:.::x..::....x..x.:x..x..x:....:.....x.:x...x..x...:.--.x...:..:....-----..:..:...x.x:.x::..:.:..xx..:. 14M5I40M2I100M2I13M5I30M 125/197 63.5% 211/94230402 0.0% 14/197 7.1% 7507112 NA +3383 chr4 + 190214555 42364835 42364834 42364928 94 TTCTCTTTTTCTTTCTTTTCTTTCTCCTCCTTCCTTC-CTCTTTCTCTTTCTTTCTTTTTCTTTTTTCCTTCCTTCCTTCCTCTTTCTCTTTCCC chr4 - 94230402 35294589 35294588 35294683 58935720 58935719 58935814 95 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC ..::..:...:.::...x:x..x:.:..:.......:-..:.:.:x:....:...:.:...x.........xx.:x..x::.::.....x..... 37M1I57M 61/94 64.9% 95/94230402 0.0% 1/94 1.1% 7070246 NA +3133 chr4 + 190214555 42364982 42364981 42365063 82 CCTCCACTTCCCTCTTCT-----CCCCTCCCTCTCCTCTTCTCCTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTCTTTTTTTCTTTT chr4 - 94230402 8439358 8439357 8439444 85790959 85790958 85791045 87 CCACAACAGCCATCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTT ..x.x..xx..x......-----:.:.:..x.x.:..x......:..:x::::.:.:.::........:.....:....:....... 18M5I64M 56/82 68.3% 87/94230402 0.0% 5/82 6.1% 33925624 NA +3636 chr4 + 190214555 42383800 42383799 42383893 94 TGCGCCCAGCCTATTT---TCTTTTCCCTCTGTCCTTTTTTCTTTTCTCTTCTCTTCTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 15925007 15925006 15925103 78305300 78305299 78305396 97 TACTTCCAGCTTATTCCACTCTTATTCCTCTGTCTTTTTTCCCTTTCTATTCCCTTTTGATACTTCACATTCTTTCTTTTCATCATCATTCATTTTT .:.x:.....:....:---....x.:........:.....:.:.....x...:...:.xx.x...:x:x..........::x..x.:x..:x...:. 16M3I78M 65/94 69.1% 97/94230402 0.0% 3/94 3.2% 26458793 NA +3929 chr4 + 190214555 42383874 42383873 42383992 119 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGAT-TCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:..:.:::...:.....:..x:.:.:.x.x:..:x.:..xx.-...xxx::...x.....................x.xx...:........ 18M6I51M1D49M 80/118 67.8% 124/94230402 0.0% 7/118 5.9% -698027 -93532375 +3749 chr4 + 190214555 42383896 42383895 42384009 114 CTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTC-TTTTTCTTTCTCTTTTCTGAGACGGGGT chr4 - 94230402 78374923 78374922 78375037 15855366 15855365 15855480 115 CCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCTTGGACAGTGT .::.:....x.......:.x:::.:...:.::..::.............xxx...:..:...xx:..x..:xxx...:...:x.:.-:..:...:...:.x:...x:...:.x.. 86M1I28M 72/114 63.2% 115/94230402 0.0% 1/114 0.9% -35991027 -58239375 +3007 chr4 + 190214555 42384114 42384113 42384177 64 CTCTCTTCCTTCCTTCCTTCCTTCCCTCTCTCCCTCCCTCTCTCTCTCTCTTTCTTTCTTTCTT chr4 - 94230402 68014329 68014328 68014392 26216011 26216010 26216074 64 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATT ..x:....:::...:..:x.....::.:..:..::...x..:...:.:..........x:.x.. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% -25630215 -68600187 +15530 chr4 + 190214555 42397915 42397914 42398341 427 GCAGGACTGGCTTCGGCCGCCGGGGCCAGCAGCTTGCGACGTGTCCCTGGGGAGGCGG-AATCGCTGTGCGC---CCTGAGCCCGGGCTCAGCCCTTCGCTTTCCAGCTGCGTCCTGCTCCCGGCCGCCCAGGGAGCCCAGTGGCGATGAGGG------------CACTGCTGGCGCTTTGCCTTCTCCTTGGCTGGCTGCGCTGGGGCCCGGCGGGC-GCCCAGCAGTCCGGAGAGTACTGCCACGGCTGGGTGGACGTGCAGGGCAACTACCACGAGGGCTTCCAGTGCCCAGAGGACTTCGACACGCTGGACGCTACCATCTGCTGCGGCTCCTGCGCGCTCCGCTACTGTTGCGCCGCGGCCGACGCCAGGCTGGAGCAGGGCGGCTGCACCAACGACCGCCGCGAACTGGAGCACCCAGGCATCACTGCGCGTAAGTGC chr4 - 94230402 24081115 24081114 24081534 70148869 70148868 70149288 420 gcgggggcggctcctcccgcgggg--cggcggc--gcggcggggtcgggcggagggggcagCCCCCGGACGCGGCTCCGCAcccggggccgcccc------------ctgcgtgccccgccggggcggACGggcagcgcgg-ggcgatggcggggcggcggcggctgctgctgctgcgctgcctcctgctggggctgctgggcggcggc--ggcgggcagcgcggcgg--aggGGAGTACTGCCACGGCTGGGTGGACGGGCAGGGCGGCTACCACGACGGCTTCCAGTGCCCCGAGGGCTTTGACACTGCGGCCGCCACCATCTGCTGCGGCTCCTGCGCGCTGCGCTACTGCTGCGCGGCCGCCGAGGCGCGGCTGGAGCAGGGAGGCTGCACCA---ACCACCGGGAGCCTCCGGAGCCGGCGATCAGTGCCCGTGAGTGC ..:..:x:....:.xx....x...--.:..:..--...:..x.x:.xx.x.....x..-.::.x.:.x:...---:.:.x:......x:.:x...------------......x.:x.x..x..x..xx.:..x...x.:.-.......:x..------------::......x:..x:.....:..x..x..x:x....x..x.x...--.......-..x.:..:.--x..:.........................x.......::.........x..............x....:...:.....xx:..x...:..........................x........:.....x..x.....x..xx.............x..........---...:...x..:.:xxx.x.x..:.xx....x...x...:..... 24M2D7M2D23M1I13M3I20M12D34M1D11M12I44M2D7M1I9M2D167M3D44M 302/403 74.9% 420/94230402 0.0% 41/403 10.2% 18316800 NA +5772 chr4 + 190214555 42398074 42398073 42398259 186 GCTTTGCCTTCTCCTTGGCTGGCTGCGCTGGGG---CCCGGC-GGGCGCCCAGCAGTCCGGAGAGTACTGCCACGGCTGGGTGGACG---TGCAGGGCAACTACCACGAGGGCTTCCAGTGCCCAGAGGACTTCGACACGCTGGACGCTACCATCTGCTGCGGCTCCTGCGCGCTCCGCTACTGTTGCGCCGC chr4 - 94230402 82533695 82533694 82533871 11696532 11696531 11696708 177 GCTCTGCGTCCTGCT--GCTGGCCCTGCGGGGCGACCCCGGCCGGGCGGCC-----------GAGTACTGCCACGGCTGGGCAGGCGGCACGCAGCGCTGGCACCGCG---GCTTCCAGTGCCCGGAGCGCTACGACGGCCCCGAGGCCACTCTGTGCTGCGGGACCTGCAGCCTGCGCTACTGCTGCTCGGC ...:...x.:..x..--......:x:..x...x---......-.....x..-----------...................::.:..---:....x..x:x:...:..---.............:...x:..x....:xx.:x..x..:..:x.x........xx.....:xx..x........:...x.x.. 15M2D16M3I6M1I8M11D25M3I18M3D82M 127/170 74.7% 177/94230402 0.0% 23/170 13.5% -40135621 -54094781 +3118 chr4 + 190214555 42405317 42405316 42405361 45 AAAAACAAAAACAAACAAACAAAAAAAAGAATCCAGAAGAAGAGT chr4 - 94230402 26405353 26405352 26405397 67825006 67825005 67825050 45 AAGAATAAAAACGAACAAACAAAAAAAAAAATCCACAAAAATAGT ..:..:......:...............:......x..:..x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 15999964 NA +18498 chr4 + 190214555 42408324 42408323 42409347 1024 TTTTAGAAAGCAATATAATTTCTAGAACTAGCAATCAA-AACTTCAACAA----TTTTAAGTAATGGTAAAGTTTATTTCATTTTTAATAACAATTAGAGGACAAAATGTTTAAAATTTGCAGTTTAAAACATGCACATTCACAAAAGGCC-AATGACACATAACACTGCATAGAAATAA---TATTACTCAATTTTAATAACTATAAAACACAGTGCATCAAACATCAAGATAAAC--AAACCTGAGAAAACTACTATAACCACAGATTCAATAC-TCTCCACTCATGCAGCTTCACAATTTCTACAGCAGTTTCAGCAGGAATGGTTTTTCAGGGAGCTG-AAAATACTACTTTATCTTTAACGCAAAACTGCAGTTTTCTGTAGTAGCTGCCTTCCAAGGCTGCCCTGTTTTTCTTAACCTAATAAAC-TTGAAAAT----GTAAAAAATGACGATTAAAGTAGTTAAACAACAGATAGTATTTACTGCATTTATGGCTTCCATT-TAGAACCATGAAACATA--AAAATATTATTTTTAA----------------------------CTATTCTGCTCACATCTTTGCAAGAACAGAT----TTACCTGTGGAAAGTTGCTGTTAATTCAAAGTAAGCAAATATGAAATCTAGCTTTCCTAC----------TTAAGGGAGATTTATTTGCTGAGAAGTTTTGGGAGCTTTATTAAGAAAAGTTC--TTAGAGGCAAGCTAAACAAAAGATT----------CAATTAAATT-----TGTTCAA--ATTTCTTTGTAAAAT---AATCTACTTATTAAAAAA------------------------GTTGTGCAGAGGACCAATTAATTTGT--------CTACT-----GAATTTTAAATTCCAGG-----------------------------------------------TAGGCCGTGATAGAACTTTACAAGGCAGAAATAAACATCAAGATTTACAGCAATAGCCATGCATTGGCCTGGATCACTT--TAAATATGAACTCATGCAAAC-----CATAAACCTATCAAAAACACAGCTGTTCTCATACAGAAAGTAAATCAAGACGAAATATGGAAAACATTTATTTCCTTTCCTTCAAAATTTAACTTACATTCCACTTTAATAGCTGTTGAAGGTTAATTAAAATG chr4 - 94230402 24087153 24087152 24088303 70142100 70142099 70143250 1151 TCTTTGAAAGCAAT-----CCCTTGCACTTGCAACCATTCACTTCAATGAAACACCTTCATTAATGGCAAAGTTTATTT-ATTTTTTTTAACAATTAAAAGACAAAACATTTAAAATTTGCAGTTCAAAACATGCACATTCACCAAATGCTAAATGACATGTAACACTGCATAGAACCAAATGTGTTACTAAAAGAGAGTAACTAGAAAACACAGTGCATTTAACATCCAGTTAAAACGAAACCTGAG-AAACTACCATAAACACCGATTCAAGAAGTCTTCGTTCATGCAGCTTCATAATTTCCACAACAGTTTCAGCAGTAATGGCTCAGC--GGGGCTGTAAAACCTCACTTTGCCTCGAATGC-AGATTTTGCTTGTACATAGCGACCACTTTCTGCAGCAG--------TTCAT-ACATATCAAACACTGAAAGTCTTAATGGAAAATTAAG-TCGAAGTATTAAAAAAAACAATA----TTAGTGCATTTATGGCTTCAGTTCTACAATAAAGAAACACGATAAAACATAACTTACAAAAAAAAAAAAAAAACAAAACCCAAAAACTTATTCTGGTCACAGCTTTGCAATTACAAATCACACTATTCACGGAGA--TGCTTTCATTT--AAGCAATCCTCCAAAAGTACCTACCCTCCTACGCGCCCAACTCTGCACGCCGTTGCTCAGCTGAGCAGCCCT-----CATACTTACGAGCAGCCCAATTGAAGCCTATGTGAGTAACGGCTTGCATAAGCAGGAACCAGGTTTGGAATGCTAAAATATTCCTTTGTTTAATGAAGATCTATTGGTTAACAGAGAACAAACTGGGGGAGCGAGGGTGGGGGGGCAAAGGAGCGACTCATTTGTTGAGTTTGCTACCAGTGAAAACATTCAGTACCAAGAAAATGGGATCGACAAACTGATTTGCTTCCACAGCACTAGCTTCTGCTATACTATGAGGAGACTTTTAACGAAGGCAGTACAAATGAGGG--CAGAGCAACCACCATGCATTGCCTCAGAACACTGAAAAAATATCACCTCATGCAGACGAAATGACAAATTCATCAGAACTACAAGTGCTTTTACACAACA-------CAGAAGAAAACAGGAAAATAACTTCTCTCCTT-------AAATTTAACACATGTCCCAAATTACTAATCATTCAAGATGGGTTCAAATG .:..x.........-----::..x.x...x....:..x-x.......::.----::..x.x......:...........-......xx.........:.:.......::................:.................x...x..:-.......::...............x:..---.:.....x..xxxx.:......x..............:x......x..x....x--.........-.......:....x...x.......x.x-...:.::.............:......:...:............x.....:.:xx.--..:....-....:x::.....::..:x..:..-.:.:.x::x..x.x::...:::.::.:...::x:..x.--------...x.-..x..x:....-:.....:.----:.::.....x.x.-.::.....x.x...x..xx:...----...x...............x:..-..x..:x.x......::--....:..x.:..x:..----------------------------:.......x.....x........xx...:..----:..:::::...:.--....x.:.x..--...:..x.xxx:.x:.:xx.:x:.::......----------:.:x:x.xx:..xx.:x......x..:::.-----.x.xx...x..:x..::.--..::..x.x.xx.:.::..x:.x..----------x..::.::..-----..:.x..--...:......xx...---:.....:.x:....x.:.------------------------.xx.x...:....x.:.:.x......--------....:-----:..:x..x.:.x...:.-----------------------------------------------..x:.::...x:::.....xx.x.:x:.x.:..x.x..x.:.:--:.x.....:x:..........x.:::..x....x--x......x.x........:..-----x.:...:::....:..x:...:x..:.:.:.:...:x.-------..::.x:...:.x.:...xx.:..x.:.....-------.........x:.::.:...xx...x..::::..x...:.x::..x..... 14M5D19M1I11M4I25M1D71M1I28M3I54M2I9M1D27M1I56M2D7M1I24M1D38M8D5M1D11M1I8M4I13M1D23M4D23M1I17M2I16M28I31M4I13M2D11M2D32M10I30M5D18M2I25M10I10M5I7M2I15M3I18M24I26M8I5M5I17M47I43M2D34M2I21M5I38M7D32M7D50M 669/975 68.6% 1151/94230402 0.0% 225/975 23.1% 18321171 NA +20449 chr4 + 190214555 42412182 42412181 42413038 857 AAACAACAAAGAAGCATTTGTAAGGCCAAAGGTGCAACATCACCGATTTTAGTAGCAAATGCCTTGAAA--TATTCATTTTTG-------------TAAATCACTCT-TACATTTGGAAAG--TCAGGCATGCAGATCTTACAGCGGAACTGGAAGTAAACTTTCTCTTACATTTCTGGGCATATGACTACTGAACTAGAAAAACACTTACTGAACCTCTTTGGCAAACATTTATCAAGACAATTTTGGACACAAATGCTTGT------------TTAGAAATTTTGCTCAGGAAGGTGAGTCAGTTCCTTAAGAATGCTGGTTTGTTTCAGCATATCCTGAAATCTAAGTCTGGATACCAAGAGT--------CCCTTTAACTAAATATCATTTAGAGTTTTTTAATGGTTGGTTACCTTGTGGTACAGCCAATAAACTGACAGTCAGTTACAGCCCCACAGTAATGGCATAAG-AATACTGACTTATTCTCCGTTTAAGA-AAGCCCTCTGGCAAGATACCAGGTCATTTTCAATTTCCGTTTACAAAGACTTAGCAAATACCTTAAAAAAATCCAAAAGAGATGGTGTTACAGTACAGTTGCACAGTGCTTATGTCTATAATATACATGAATCTGAATGTCCATCAGCGAGATGAGCTCAGATCT--ACCTTTCCTCTTCATGGACCAGACTGGAATTGGTTAGCAGACTGCGGTGACAACCTGGTAGCTCTCCTTAGAGAGGTAAC----AGAGCCTGCCTTTCAGGCTCT-CCCCATCACCATTCGTCGGGCCTCTGTTTCGTGGTATCATATGCTCTTATCACTTCAGACTGTGAAACGATTCCATTTTCATCTTGAGAGAACGCATACCCATCTGTAGGTTAATGATAAAACAGAAA chr4 - 94230402 24090995 24090994 24091854 70138549 70138548 70139408 860 AAATAAGGGAAAAAATTCTATAAGGCCAAGGGTGCAATACTTGCACTTTTGAAAGCAAATGCCATCAAGGCCACTCACATTAGACGCACTGCACTTTAAATCCTTCTCTGCAAGTGCAAAGACTCAAGCATGCAGTTCTGAGATCAGGACTGGA-GTTCATTTCCTTTCAAAGTATT-----TCTGACAACAGAA-------AACATTTATGGAACTTCTTTGGCAAGCGTTT-TTAGGCTAGTTT--GACACAAACAACTATAAACATCTCGACTCAAAATCTTTCTTAAAGAAGGCGAGTGAACACCGTTAATATACTATTTT--TTCAGCACTTGTTGAAATTGAAGGCTTGTTATCAACTGTATACATTGCCACTTAAAAAAA---CCTTCACAGATGCC-AATGGTCTGTCAATGTAAAGTATGTTTAGCAATCTGATCATTACCTTC----------CAAGTACATAACCAGTACTGATTCAACTTCATTGTAAAATAAGCAAGCTGGCAAGATATAAGGTAAATTCCGAT--CTGTTTACAAAGGCTAAGCGAATACCTGGTAAAAAATTTAGAGATGTTGTGTTATAGTATAGTTGCACAGTGCTTATGTCTACTGAATACATAAATCCAAACTGTATGGAATAAGACCATCACAGATCTTAAAATTGCTGATAACTGTGCCA---------TGGTC-GCAGCTCCCAGCAAAGATCTAGTAGTCTGTCTCACAAAAGCAACTTATAAGGCCTGAATTTTGAGCTGTGTTCTTTCACCATTCCTCAGGCCTTTGTTTTGTGGTATCATAAGCTCGTATTACTTCAGATTGGGAAACAATGCCATTTTCATCTTGAGAGAAAGCATAGCCATCTGCAGATACAAAACAAAATAGAAA ...:..x::.:..:xx.:.:.........:.......:.::xx.:x....::x..........x.x..:--:.:...:x..x.-------------......x:...-.:..xx..x....--...:........x...x.x.x.:.:......-..xx.:..:..:.:.x.x.x:.-----.x....x..x...-------....:...:x....:..........:.:...-.:.:.x:.:...--........::x:.:.------------.:.:..x:...x:.x.:.....:....x.::x..x.x.:x..:..:x...--.......:x.x:......:x...x..x.x..:...xx..--------..x:....xx...---.x..:.x..x.x::-......:x..:.x:x.:x:...::x::.::..x....:x:.:.x:.x.----------:..xx:.....x-.:......:.:.x::..xx.x...:.-....xxx...........:x....x.x..:.:..--.:..........:..x...:.......x:x.....x::x.:...x:.x......:....:......................:x:x......:....::..:xx:xxxx.:::...:x.x.x.......--.xx..x.:xx.xxx..x:...---------....:-....x::x.:.::.x:.:..:....:::x:..:.x.:.:.:...----.::.....xx...:::...x.-::.:x.........x..:.....:.....:...........x....x...:........:..x.....:..x....................x.....x.......:..:.xx.x:.:....:..... 69M2I12M13I11M1I13M2I31M1D22M5D13M7D31M1D12M2D15M12I50M2D39M8I13M3D14M1D48M10D12M1I26M1I34M2D129M2I21M9D5M1D44M4I21M1I128M 546/813 67.2% 860/94230402 0.0% 91/813 11.2% 18321187 NA +6892 chr4 + 190214555 42414618 42414617 42414746 129 AATACTCACGGAGCAGATTTTGTTGCAAGGATTCAGAGCGGTACAAGTTCACGTGGTTCTTCTTAAAGACGTTCTTGAGCAGTTGCGCCCTCTCGGTCAGGCTGCAGAGCAGGTGCAAATGTGTGAAAT chr4 - 94230402 24092470 24092469 24092596 70137807 70137806 70137933 127 AACACTTACGAAGCAAGTTTTGCTGCAGAGAATCAGAGCGATACAGGTTGACATGGTTCTTCTTAAAGACATTCTTCAGTAGTTGGGCTCTTTCAGTTAAGCTAGAAAGAAA--GCAGACATGAAAAAT ..:...:...:....::.....:....::..x........:....:...x..:.................:.....x..:.....x..:..:..:..:.:...:x.:..x.:--...:.::..x:.... 112M2D15M 95/127 74.8% 127/94230402 0.0% 2/127 1.6% 18322148 NA +6409 chr4 + 190214555 42422804 42422803 42422916 113 TACCTTTTTCCAAGTACAACTGCTCCTGGGTCTTGAGATTTTGCCTCCAGCTCCTGAACTTCATCGACCAATGTTTTAAAAGCAGTCCTCTTGATACTGCAAAAAGAAAAAAA chr4 - 94230402 24097123 24097122 24097235 70133168 70133167 70133280 113 TACCTCTTGCCATGTACAACTGCCCCAGGATCCTCAGACTTTGCTTCCAACTCCTGAACTTCATCTACCAGTGTCTTAAAAGTAGCTCTTTTTACTCTGTAAGTAATACAAAA .....:..x...x..........:..x..:..:.x...:.....:....:...............x....:...:.......:..::..:..x.:x...:..:x.:x.x.... 113M 86/113 76.1% 113/94230402 0.0% 0/113 0.0% 18325681 NA +6540 chr4 + 190214555 42423580 42423579 42423708 129 TCTATATTTCTCCGTATATAACTGAGTAT----ATACTTACACCTTGTACACCACATCAAGGAGCAGAGATGCCACAGGGATGAATAACAAGCCCATCCAAAAGACTCCAGAACTGAACAACATGGCTGCCTG chr4 - 94230402 24097602 24097601 24097733 70132670 70132669 70132801 132 TCAGTACTTTTCC-CATAAACATCAGTATTTTCATACTCACACTTTGTACACTACATCAAAAAGCAAAGCTGTCATGGGAATACATAAAAGTCCCATCCAAAACACTCCAGAGCTGAACATCATAGCTGCCTG ..x:..:..:...-:...x.xx.x.....----.....:....:........:.......::....:..x..:..::..:..:x....x.:x...........x........:.......x...:........ 13M1D15M4I100M 99/128 77.3% 132/94230402 0.0% 5/128 3.9% 18325978 NA +42600 chr4 + 190214555 42424971 42424970 42426046 1076 TTAATAAGCAAAACATGATCTTTGACATGTTTGCTGACATCCTCAATGGTGAAAACCAACAATAACTGTGTAATAGGAAATGTCTATCAAGTCAGTAGATTTTCTTTAGATTGAAAGAAGCTTTCTAGT--AAGGTAACAACTGTAAAAAACCAATTTCTTTCTCCTTCTGGGGGGAAAGGTAAGGTAAGAATTCCAAGGCAT-GCAACTGAAAATACATTTACTTGGC--------TTAATTTTAATATATTTTAATTTGGTTGGGGGGGGGCAAGAGAAGGAGGATTTATTCTTGCCTTCACCACCTTGTATTAAATGTCCACCAGTGGAAAAGGCAAAAGTGGT---GGAGATTCAAGGCTGCTAATTCTGACCATTGTGATGCTAACGATGAATGGAGGAGTGACTGGCGCCCCACCATTCAGTCTA-CCAGCCTTTGGCATTACAAATGAACAACATGAATTGAGGGGAAAAAA---GTTTTTCTGCGTCATATCTGAAAGCCTGTCAGTTTTTTTTTCTTTT-GCAGAGTTAATCCAAACCTAAAAGATTTAAAGCCGACATTCGCATTAAAGACAGAGAGTCTCTTTGTATTTTTTGGATGAAGAGGGGGGGAAAAATAAAATCCCACAGAGGTATTTCCTTCCTTTCTGTATAAGAAAGCT-CCCCCTCACTCTGAAGAAACCAGTTTTGTCTCTAACTTTTCACATTTCCCCACTCACAGGCAGGTCAGCTGGGAAAAGGCGAAGGGATCCTG---AGACAATGGTGGATTGCTCCGAACAGGAGCAGCCTGTTC--GGGCCGAGCTCCGGTTCCCTCCGAGAGCGGTTTGCAAATTTCTCCTAATGTGGGAGACTGGTGCACCAGGCCAAGTGGCCCCCACTGCCCCTTCTCAAGGCACTGTGAAACCAAATGGAATTTGCCACGAAAGTGGCTCCCGGGGGCCTTGAGAAGGGATCAGCTGAGGAAGCTGCAAAGCT--GGTAACAGGAGGGC--ACAGGCCGTGTGTGGCGAACAAGCAACTGCTTGTCTCTGCAGAGTGATGCCGGCTCAAAATCGAACCACTGGGGCTTCAAAAATAAACCAACGCTGCCT chr4 - 94230402 24099195 24099194 24100218 70130185 70130184 70131208 1024 TTTATAAGCAAAACACGACTTTTGACATAGATGATTA-------AATATTAATTTCCTAAGAAAACAGC-TAATAGGAA-TGTCTATC--GTAACTACATTTTAC---------AAGatattttataattaaatataaCTTTGACAGAATAACAGTTTCTT----------------AAACAAAAACAAAAAGCAGAAAACATCACAACTTGAAGTAATTACAACTGTTACATCCCATTATTAATAACATTTTTTAATTTAT-------GGGACACGACTAAGAG---CTGTCCTTGCATTAGCCACCCTGTATTAAATGTTCGCTGGTGAAACAG-CAAAAGTGATAATGTAGGTCTTAGGATGTTAATTCTGACCATTGTAATGCTAACTATGAATGAAGGAACAACTGGCGCCT-ACTATTCAGTCCATCCAGCCTTTGGCTTTACAAATGAACAACATGAATTGAGGAAAAAAAAAAAGTTTTTCTGCGTCATATTTGAAAGCCTGTCAGATTTTTTTTCTTTTTACAGAGTTAATCCAAACCTAAAAGATTTAAAGCCGACATTCGCGTTAAAGACAGAGGGCCTCTTTGTATTTTTTGGATGAAGA---GGGGAAAAATAAAATCCCACAGAGGTATTTCCTTCCTTTCTGTACAAGAAAGCTCCCCCCTCACTCTGTAGAAAACATTTTTGTCTCTAACTTTTCACATCTCTCTACACATAGGCAGGTCATCTGGGAAATGGCAAACCAATCCTTTCCAGACAATGGCA--------CTAACAGGAGCAGCCTGTTCTGGGGCCGGACTCTGGCTGCCTCTGTTCGTGGTTTACAAATTGTTCCTAATGTGAGAGATTTGTGGTCTATGCCAAGTTTTCCCC----------CTTTAGGCCTTGTGAAACCAAATGGAATCTGCCACAAAAGTGGCTCCCAGGGGAATTCAGAAGTAATCCAAAATGAGAGCTGGGAAGCCTAGTTTATTGTAGAACTAACAAATCCTGTGGGGAAGATAAATAATATGTCGTCTGCACA-----------GCTCATGCTC-AATAACAGGACTTTCTAAAATGAATTAACATTGCTT ..x............:..::........:xx..x.x.-------...:x.:.xxx..x.x:.x...x.:-.........-........--..x.x..x.....x:---------....x::...x..:.--..x:....xx:x::.:..x.x..:......----------------..:xx..:::..:..x:xx..::...-:.....x:..:..xx.x:.x:..x:--------...x.xx...:..x.........:x-------...:..x..xx.:...---:.:.:.....x..x:.....:............:.:.::...:..x..-........:.---.x..:.::x...x..:................:........x.......:....:::.........:-..:........:.-............x..........................::......---.................:..............x.............-:..........................................:............:.:........................---............................................:.........-.............x.....x..x......................:..:.:..x..:..........x........x...:..xx:.....x---.........::--------.x..................--......::...:..:.x....:.xxx.:.....:......x:..........:....:.x...xx.:.x.......xx:....----------..:x....x:..................:......:............:....xx..x.....x:...x:xx:x.::.....x:....:--.x.x.:x.x..::.--...:::.x....x..x::.:..::..:xxx.:....x::..-----------.....x:x..-..:x..x..:x:...x.....:..::...::...:. 37M7D25M1D9M1D8M2D15M9D15M2I30M16D26M1I25M8I25M7D16M3D48M1D10M3I67M1D13M1I47M3I46M1I83M3D54M1I92M3I11M8D20M2I83M10D89M2I14M2I41M11D10M1D36M 769/995 77.3% 1024/94230402 0.0% 110/995 11.1% 18325776 NA +5928 chr4 + 190214555 42436994 42436993 42437305 312 TTTTCAGAAAGCCTTTACAAACCTCAATCAAGAGATCTGAAATTCTGTAAAACACATGCTCGTTCCTTAACTTCAATTTCCTTCAGTA-----GTTTTATAGATCCCTTAGGCCAGGGAGAGCAGAAACAGAT----------------GGTGCTCGGGAGGACTTTACAGTGCCTGTCTGCAATGCCACAATAAATTTAAAGGTTTTGCTGATACTAAGCTTCTGTTATTAATCCTGATATGAAACGATCCCTGCTGTAGCTGGTTTTTTATTTTTTAATCTGGTTTATTAATCAT-TGGCT--------AAACTATTTTCTCCTAGAAATTCAAAAAATA chr4 - 94230402 24101810 24101809 24102142 70128261 70128260 70128593 333 TCCTCAATAAACCGTCAAACTCTTTTATGAAGCAATGTTGTTCTCCATAAAA-ATATGCATGCAAAGCAAATTTTAGTTCCCTAAACAAGAGGGTCATATAGGTA---TAGG--GAGGAAGACAGACACAGATCAATGATTACTGTTTTGGGGCTCTGGAGAACTTTACAGTGCACATCTACAGTATAAAAACAAATTAAACGGTTCTGCAGATACTGACCTTTTGCTTTTAATCTTAAAATCATAC--TTCTTATTTCAGTAAATTTTACAGTTTTT-ATCTACTTCATTAATCAGATGGGTGTATAAAAAAACAACACCCCCCTAACAACTCAGAGCATA .::...:x..:..x.:.x.xx.:.:x..x...x:..x.x:xx:..::.....-.:....x:.:xxxx:..x..:x.x....:.x.::.-----..:x.....:.x---....--::...:::....x......----------------..x....x....:............x::...:..:.::x.x..:.....x..x....:...x......:.x...:..:.x......:.:.x..x.x..--.:.:.::.x:..:x::....x:.x.....-....:x..:........x-...x.--------....x.:x::.:....:x..:...:.:x... 52M1D35M5I12M3D4M2D19M16I98M2D29M1D18M1I5M8I31M 195/303 64.4% 333/94230402 0.0% 39/303 12.9% 18335184 NA +9005 chr4 + 190214555 42443558 42443557 42443688 131 ACATTACCTCTCCTGACATATCAGGGGCCATCGGAATGGCAGGCCACAGAGATGAGTAGATTCCAAAAAACACCACCCAGAGTGCGATGCTCCCCCATATCGCTATGTGGCTGAACTG-TAGAGCAAGGAAA chr4 - 94230402 24105350 24105349 24105481 70124922 70124921 70125053 132 ACCTTACCTCTCCTGACATATCGGGTGCCATAGGGATGACTGGCCACAAAGAAGAGTAGATTCCAAAAAACACTACCCAGAGTGCTATGCTGCCCCAGATAGCTATATGGCTGAACTGTTAAAACAAAGAAA ..x...................:..x.....x..:...:.x.......:...x....................:...........x.....x.....x..x.....:...........-..:.:...:.... 118M1I13M 113/131 86.3% 132/94230402 0.0% 1/131 0.8% 18338208 NA +5543 chr4 + 190214555 42444564 42444563 42444652 89 AGATATTTTCTTACCCATGTCCAATATGATGTCTCCAATCCAGCTTTCAAACACACAGTTATCACCACAAACT---AAAACAGAAGGGGAAA chr4 - 94230402 24105625 24105624 24105716 70124687 70124686 70124778 92 AGACATTTGCTTACCAAAGTCCAATATGAGGTCTCTAATCCAGCCTTCAAACACACAGTTAGAACCACAAACTTTAAAGAGAGAAAGAGAGA ...:....x......x.x...........x.....:........:................xx..........---..:.x....:.:..:. 73M3I16M 75/89 84.3% 92/94230402 0.0% 3/89 3.4% 18338939 NA +44257 chr4 + 190214555 42451912 42451911 42453420 1509 ATTGACAATGAGTTATTTTTCTAAAAA---AGTAAAAAGTC----ATCTCTTTGCATTCATATCCCTTCT---------ACTTACCATACTGAAGGGCTTTTAGTGGAAACCAAAACAGAATAACTGAGTGGAAGAGGCCATTTAAACAATGAACCCAGAAAACCTGAGGGAAAACAAAAATCCATGAGAACCATTTGCGATAAACTAGCTCTGTGAACTCTGACCTTTCTTTTTATCTATGAGCTAGATTCACAAAATGTGTTTCTGTCGGGCCACCACTGTGAATTAATAGAACTGACAGACACTTTCTGCCTCTTAGACTTTCATGGGTCATTTATTTATTTTTATGTTTCTCAAA-----ATGTTTTTTCAGCTTCACTTGAATTTTTTTTTCTGCTTCTCAAAAACCAAATTTAAATTTCTGCCTGAAAAAGAA--AATAAAATTTAAAATAAAAAAATGCAGAATTCTGAAATTCCTTAAGTGGGACTATTTTCATAATTCCAGAAGAATAGACTTTTAAAAGA----------TTATAATTTGGGGAAATCCCTTTATA------TTCCCCACATA-----TAACTGTAAGCTTTCCAATGCTAAAGATGTA-ATGCTTTCTCTTATCAAGAGATATAAAGATACTCTATACTATTCTCTGCAGGGTATCAAGATATATACTCGTTATAGCCAGTATTATATAATCATACAAATAAAGCACTGTGACTATGACTTTACTAAAGG--CTTTCACAATTTAACAGTGTTAATACCAAGTTTTGTATAATTATAACATCATATAATAGTTACTACTTTTTATATCTATTGTATTTTAAG---AACAAGAGAGCAAGCGTCACTGGTACTTTCTTT-----GTAACATGGATGTGAAAGATTAAGTTATAGAAAAACTGTTTAGAATTCTTA--TGGCCCCTCTGAACAG---------TTGTAGTTTTGTCATTTAAAAGTGCTTCTTGCAAACAAAACTTATGCTAAATAAAACTGGCATGTATTAATAGTTTTAAGCTGTTCAAACAACAGAAATTAAGTTGCCTGCCTCCCAAAATTTTCCACTGTGAGCTCAATCTCTTTTGTTAGTTCTCCCAGCCACACTGGATTGTATGATCCAATTTACGCTCCAATACATTACACATTTGAACTTGTGTTACTCATTAACCTTTGTCTCTTCTCCTCACTGTGTCATTACCACAAGTTTTTATTTGACAGAAAGCACAGGTGGGTGCAAGAAAAATTAGTTCTACTTTTCCATTTTCCTGACTGATACTTATTGTCACATGCTAATCCTTTAACCCCTGTCACGACCTCAGAACCTCCGACCCTTTTTACCATAACAAACATAAGCATCATCATTCAGGGCAACAATGCTCCCGCACTTGGAACCCCCAGCAACTGCTGT-----GTATACAACTGTGCATTTTGTAGCCATTTGTCCCTGAATTTTCAAACACTTATATGAGATTGAATCAAATACTTTTCACTGAAATCACTAGAAAAAT----CCATAAAC---CCTGTAAAACAGGGTTGGCAACTCGTGTATAAAAACT chr4 - 94230402 24111952 24111951 24113431 70116972 70116971 70118451 1480 ATTAATAAAGCATTACTGCATTAAAAAGTTACTAAGAAATTCAGTACCTTTTAAGATTTATTTTTTTATTTTTCATAACACTTACCATGCTGGAGGGCTTTAAGTGGAAACCAAAACAGAATGAATGAGTGGAAGAGGCCATTTAAACAATGTACCCAGAAAACCTAAGGGAAAAGAGAAATCCATGAGAACCATTTGCAACAAACTAGCTCTGTGAACCCTGACCTTTCTTTTCATCTGTGTGTTAGATTCACAAAATGTGCTTCTGTCAGGCCACCACTGTGAAGTAACATAACTGACAGGCACTTTCTGCCTCTTAGCTCTTCATGGGTCATTTGTTTATTTTTATGTTTTGAAAAAAAGTATGTATTATCTCCTCCTTTTAATTT----------CAAATCAGAAGGGCAATTAAAACGTATACATATGGGAGTATCATCAGAA--AAAAATAAACTAAGCCAGA--------------CAAGTGGAACAATTGCTACA--TTCTGGGGAAGGGAAGTAAAAAAGGACTTCAGTTTTTATAATTT-----ACTTCTTGCATAATGATTTTTACAGCAGAACAATGAACCACGAGTTTACATACACT---TACCTACATATTTCCACGCACAAAGAAATTAAAAAAGGACAACTAATATCTTC---------CTAAGAT---TTCTCCTTACACGCTCCATTCTTGAAGCGCACACCTTCATTACATGGA-----ACTTCCTTTAACGTACTTTCAAAA-CAATCCGAATTAACTTCAAACTTATTTCCATTG---------ATAAAAA--AAAACTTCCAAAAACAACTGCA--TTAAGTTTATCCAGAAACCAC---CTTCTGATGCTTTCCGTAATAGATATCATGCATAT----TCTTAAGT----------CTTTTTATATCTGTAACCTGTGCCTGCAGGATAGCAATTTTTTTTTTCGTTTTTCCA-TTAGCAATGTATTTGACAATTACAGCCTTTATTAGAACTAACTAATATGTATTATCAGAGTTCAGATGTTCAAACAATTGAAACTAAGTTGCTTGCCTCACAGTTTTTTTCACAACG-TCTCAAAGTCTTTTGTTAGATTATGCAACTACCCTACGATGTATGATCCAATTTACACTCCAACACTTTGCACATTTGAACTTGTGCTACTCATTAACCTTTGTCTCTCCCTCTTGCTATGTCATTACCAGAAGTTTTTATTTGACAGAAAGCACAGGTGGATGCAAGAAAAATTAGTTCTACTTTTCCATTTTCCTGACCAATTCTTATTGTCACATGCTAATCCTTTAACCTCTGTCATGACCTCATAACCTTTGATCCCTTTTACCATAACAAACATCTGCATCAACATTCAAGACAGTCATGTTTCC-------AAATCTTTAACAACACCTATTCAACTTATGTAGCTGGGACTTTTGTAGACTTTTACTCCTAA-----TGAGTA-TTGTTTGGGA-AGAGCCACAGAATTTCCAATGAAGTCAACAATACAACTGTGCAATAAATATACATGTATAACAGAATTAGCA-------TTTAAAAACT ...:.:..x.x:...:.x:x:......---.x...:..:.:----.:..:..x:x...:..x.:::.x:.---------.........:...:........x....................:.x...........................x.............:........x.:.....................:.:.................:..............:....:..x.:.................:.......:...............x...:.x.........:.................x::..............:...............:xx...-----....x..x..xx..:.x:..:.x..----------.xxx...:..:xxx....x...:x.x.:.x.:x:::..x.--.x:.:..--x........xx..xx....--------------:......:..x...x::.:.--.:.x.::...x:..xx.xx.....:----------.........-----.x.:.:.x:...------..:x.x:..x.-----x...::::..:..x.xx.::..---x.:x..-..::..:.x.x:.:x....:..xx...:.x:x:xxx..x...::..---------::.....---.x...x...:.xx.xx:...x.xx..x.::...xx.xx.x:..xxx..-----....:x:.x..x.--......x..-:x.x.x.x:....:x:...::..xx.x:x...:---------....x.:--.xx....::x.x.x.x.:..:.--.....---.x.x...:.x..x---::x...:.:.....:x.-----:..x....x..:.----xx......----------..x....x.x:.x.x.--..xx..:x.x.:.:..---------..x.x.....x:..-...:x.:..:x.:.x:...x:.x.:.:.x.::..:.xxx....:::........x:..xx..x..x...........:x....:........:......x..:xx....:...x::.-x.....xx...........x.:x:x..:.:..x..:x:x.................:......:..x..:................:.....................:.::..::..:...........x..............................:......................................::..x............................:......:.......x.....::..:..:..................xx......x......:.:..::x...:.:..-------:..:.:::.:....xx..:.-----x...::.:...x.xx........x.x...:::...:.-----::.::.-..:.x..:..-x..::..x.x.x...:..x....:...x:.:x.x..:----.x.....:---.x....x.....::..:...-------.x........ 27M3I11M4I25M9I280M5I25M10D40M2I7M2D19M14D20M2D25M10I9M5D12M6I11M5I22M3D6M1I46M9D7M3D48M5D13M2I9M1D33M9D7M2D22M2D5M3I13M3D17M5I13M4D8M10D16M2I16M9I14M1D117M1D311M7D20M5I37M5D6M1D10M1D37M4I8M3I20M7D10M 1010/1402 72.0% 1480/94230402 0.0% 185/1402 13.2% 18339960 NA +15362 chr4 + 190214555 42455293 42455292 42455655 363 CTACCTTGGTGTTGAAGTCCAGGGCATTCTGAGATGTTTTGTATAATTCAGGGTACTTCAACATGTTCTCTTTTCTGCATGATCTCTCAAATATTCCAAGAGTTAAAGGAGGCATTGCTGTAAACATCTA--AAGCGCACAAACTGGTCATTATGTCAAGCAGCCAAATGCAGGGTGAACCTTTATCTCCCAAGTATTCAA----------------------------------TGAAACAGGAATTATCAAATGTCCTAAACTTACCACGTTATAGAGACCTATACACCATCTTTCAAAGAGGATCTGTCCAGAAAAGCCATTAACAAAGGCAAACCAGATCTAGGAAAAAAAACCCAAAACCCCCAAATTAGAATACAAAAGCATAAATGCATTGC chr4 - 94230402 24114424 24114423 24114794 70115609 70115608 70115979 371 CTACCTTGGTATTGAAGTCCAGTGCATTTTGGGAAGTCTTGTATAACTCAGGATATTTCAGCATGTTTTCTTTTCGGCAGGATCTCTCAAATATTCCAAGAGTCAGTGGAGGCATTGCTGTAAACATCTAGCAGGCAGATTAAAAGAACA-TATTGCAAG-----AGTTGAGAAGTGAAGCCTTGCTTATGGATTATTCAAATTTGCTTAGTCAAGAAGCCTTTATGATTATGATTGAAAATGAAAACACAAAA----ACAACCTTACCACATTGTAAAGGCCTATACACCATCTTTCAAAGAGAATTTGTCCAGAAAAGCCATTGACAAAAGCAAACCAGATCTGAAAAAGAGGA------------AAATCATACTACTCAAG------TGCATTGC ..........:...........x.....:..:..x..:........:.....:..:....:......:.......x...x.......................:.:x.......................--.:..:x.:x..xx.:x..-...xx....-----.:x..x:::.....x.:..:::.x:x:.x.......----------------------------------.....xx.:..x:.:x...----x:..x........:..:..:..:.......................:..:.................:.....:.............:::...:.::.------------....:.x.x...xx...------........ 130M2I18M1D9M5D36M34I19M4D98M12D17M6D8M 263/335 78.5% 371/94230402 0.0% 64/335 19.1% 18340869 NA +19169 chr4 + 190214555 42458673 42458672 42459070 398 AGAAAAGCAGTGTTTGTAGTTTTAAATCTATAAAACACATAGTGTTCAAGACTATTCCTTTATTAGCATAGAAATTTCAGACCTGCTTCTCCTGGCATTATTTTCTAAATTCCACCTCCCAGTAGAGGCGTGGCAGCTAAAGCTTCACATTCATTTTCCTGATGGAGCATTTCTGCATATTAAACAGCAGCTTACAAACAGTCAATGAGTCCTCTGCTCCCACGCCTGATCAGCACAAAAAACTGAAAGGAGAGATTCGAGACTGGCAGTTGTCCTCACTAGAGACATTCAATGATGTGTTTTCTGTCTATTCATTCACAGTATTGACATGAGCCATTAACATCTGCAGAACTTGTTTTAGCTGGCAAAAGTTGGGTATCTGGGAATTGATTTAAAAG chr4 - 94230402 24116432 24116431 24116809 70113594 70113593 70113971 378 AGGTAGGCATTATTTATTATTTTCAGCtaataaaa---ataa--------actttttttttttt----taaaCCTTCCAGTCATGTCTTTCATAGTATTACTTTCTAAATTCCAAG--ACAGAAGAGGCGTGGTCACAAAAGCCTCACAGACGTTTTCCTGATGTAGCATTTCTGCATATTAAGCAGCAGCTTACAAATACTCATTGAGCACTCTGCTCCCACGCCTGATCTGCA-AAAAAACTGAAAGGAGAGATTCAAGACTGGCAGTTGTCCCTTCCAGAGACATTCAATGATG-AATTTCTGCCCATTCACTCACAGCATTGACATGAGCCATTAACATCT-CTGAAAGACTTTGAGCTGACAAATGTTGGGTATATAGTAATTCAAGTAGAAG ..:x.:...x.:...:.x:....x.:::x......---...:--------...x..::...x..----..:.xx..:...x.x..::.:..x.:.:....:.............xx--x...x..........:x:.x.....:.....xx.:...........x..................:..............:.x...x....:x....................x...-......................:................::x.:.................-:x......:.:.....:......:.......................-.x...xxxx...x.....:....x.........x.:.x....x.xx..:... 35M3D4M8D14M4D48M2D117M1D61M1D47M1D52M 301/378 79.6% 378/94230402 0.0% 20/378 5.3% 18342241 NA +21511 chr4 + 190214555 42464685 42464684 42465083 399 ATTACCTCGATAATATAGAGCACTATATTCTTGTAGAAGCAGTATAAGATGCACTTGGAGACTCTGTTATAGTTCCAGGCACCATGAATCATCAGTAAATTCTTCAAATATTTGAACT-----------AAAACAAG-----------AGTGGGAAAAAATTAGTATT--TTCCTTTTCAAAGCATCAGTTGACTGAGAGGAATGATGTGTTTTGCAGAAATGACGCTTTACCTGAGCTATGGAGTAGTCAGAGGAATTAGCTGCCTGCAGGCCTTCATTGCCACTGATACCAACACCAACGTGCGCTGTCTGTATCATGCTGACATCATTTGCTCCATCACCGATTGCAAGCGTTACGACTTTGACTTGTTTCTTAACCATCTCAACAACTTCAGATTTTTGAAGAGGAGAAACCCTGAAAT chr4 - 94230402 24118457 24118456 24118866 70111537 70111536 70111946 410 ATTACCTCAATGATATAAAGGACTATATTCTTGTAGAAGCAATATAAGATGCATTTAGCTACTCTGTTATAATTCCAGGCACCATGAACCAACAACAAGTTCTTCAAATACTTGAACTGTAAAAAATGAAAAACAAACATATAATGAAAATGTGCATAAATTGATATTAATTTGATACTAAACTAC---TTTATTCTG---------GTCTTTTACAGTA-TAATGGCTTACCTGAGCTATTGAGTAGTCTGAAGAATTAGCAGCCTGTAGACCTTCATTTCCACTAATACCAACACCAACATGTGCTGTTTGTATCATACTAACATCATTTGCTCCATCACCAATTGCTAGAGTTACTACTTTAACTTGCTTTTTGACCATTTCTACAACTTCAGATTTTTGAAGTGGAGATACCCTAAGGT ........:..:.....:..x....................:...........:..:.xx...........:................:..x..::..:...........:.......-----------.......:-----------.:..x.x.x.....::....--..:xx.x::...x:.:---..x.:.xx.---------..x....:...x.-.:.:.x:.............x........x..:........x.....:..:........x.....:..............:..:.....:........:..:....................:.....x..x.....x.....:.....:..:..:.....:..x....................x.....x.....:.::. 118M11I8M11I20M2I16M3D9M9D13M1D202M 315/386 81.6% 410/94230402 0.0% 37/386 9.6% 18346228 NA +3711 chr4 + 190214555 42482290 42482289 42482360 71 TGAGATTCTGTCTCCAAAAACAAAAAAACAAACAAACAAACAAACAAAAAAAAAAAAGAAAAGAAAATACA chr4 - 94230402 72570633 72570632 72570703 21659700 21659699 21659770 71 TGAGCTTGTGTTTACCAAATTCATGAAGCAAACAAAGAAACAAACAAAAATAAAAAAGAAAGGAAAAAATA ....x..x...:.x.x...x:x.x:..:........x.............x..........:.....x.:. 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% -30088343 -64142059 +3038 chr4 + 190214555 42482296 42482295 42482343 48 TCTGTCTCCAAAAACAAAAAAACAAACAAACAAACAAACAAAAAAAAA chr4 - 94230402 48673468 48673467 48673515 45556888 45556887 45556935 48 TCTCTCTCTACCAGCAAAAAAAAAACCAAACAAACGAACAAAAAAAAA ...x....:.xx.:........x..x.........:............ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -6191172 -88039230 +3025 chr4 + 190214555 42482301 42482300 42482351 51 CTCCAAAAACAAAAAAACAAACAAACAAACAAACAAAAAAAAAAAAGAAAA chr4 - 94230402 51198561 51198560 51198611 43031792 43031791 43031842 51 CTCCAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGGAAA .........x..xx...x...:..................xx.x...:... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% -8716260 -85514142 +11826 chr4 + 190214555 42485477 42485476 42485686 210 AATGATAA--GGAGAACTTACCGACAGCAAATGACAGCTTTGCATGACAAAGCTAAGTCCAGGAAATACTGTCGTACTCCAAAGGTTAAGGCATATTTGAGGGTTTTCCCATCAATTATAAGAGCAAAATCATTCTCTTTCCGGAGAGCATCACCAAGGGTAGTACAGTGACGACTGAGAGTTTCCCTTGTTCCCTGGAATATTAAACAAGC chr4 - 94230402 24123607 24123606 24123818 70106585 70106584 70106796 212 AATAATAAACGTAAACCTTACCTGCAACAAATAACAGCTTTACATGACAAAGCCAAATCCAGGAAATATTGCCTCACTCCAAAAGTCAAAGCATACTTCAGAGATTTACCGTCAATAATGAGAGCAAAATCATTTTCCTTCCTTAAAGCATCACCAAGAGTACTGCAATGATGGCTAAGTGTCTCCCTCGTTCCCTGTTGCACAAAGAAAGC ...:....--.x.:.x......x:..:.....:........:...........:..:...........:..:.x:........:..:..:.....:..x..:.x...x..:.....x..:..............:..:....xx.:............:...x.:..:...:.:..:..x..:.....:........xx::.:x..:x.... 8M2I202M 161/210 76.7% 212/94230402 0.0% 2/210 1.0% 18361870 NA +3529 chr4 + 190214555 42496732 42496731 42496795 64 ATAGATATATACACACATATACACACATATATATACGCACATATATACACATACACATATATGC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.........x.....x.......:.:..:.:x.:..x::....x......:..:......:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 24975983 NA +6180 chr4 + 190214555 42503361 42503360 42503517 157 ATAAAATATTTCCATAGCTATCTGAATATAAAATACT----ATAGCATGAATATATTATTAAAGGAGTTTTAAAAATACATAATTTTACTTACATCAAGAGAGCCTTCATTTATAACAATCATTCCCATGTTCTTCTTCAACAGTTTGCAGGAGTGTCCTG chr4 - 94230402 24127436 24127435 24127581 70102822 70102821 70102967 146 ACAAGATATTT-------TACCTGGATATTTTATGCAGAAAATAGTGACGATTTATTA-------ACTTACAAATGTGCATG-TTTTACTTACATCAAGAGAGCCTTCATTTATAACAATCAGTCCCATATTCTTTCTCAGAAGTTTACAGGAGTGACCTG .:..:......-------..:...:....xxx..:.x----....::xx:..x.....-------.x..x:...x:.:...:-.......................................x......:.....::...:x.....:........x.... 11M7D19M4I17M7D17M1D78M 112/142 78.9% 146/94230402 0.0% 19/142 13.4% 18375925 NA +11417 chr4 + 190214555 42506950 42506949 42507161 212 CATCTTCTGAACTACATTAACTTATTAAAAAGCACCAACATGTAAAATGTGAACTAGGTGAATTACCGATGTTAATGGCAGTTTCTTGCTTGTCCCCTGTAAGGATCCAGATTTTGATGTCTGCTTTCATTAGCGTTTCTATGGTTTCAGGCACTTGATCTTGTAATTTATCCTCAATGGCTGTTGCTCCAAGTAGCTGAAGATTCTGAAAA chr4 - 94230402 24128667 24128666 24128871 70101532 70101531 70101736 205 CAACTTCTGTAATTTCTAAATCTATCAACAAA-GCCACCAAGTAAA---TGCAAT---TGTAATACCAATGTTAATGGCGGTCTCTTGTTTGTCCCCAGTAAGTATCCAAATTTTTATGTCAGCTTTCATTAGTGTTTCTATGGTCTCAGGCACTTTGTCTTGTAGTTTATCCTCAATTGCTGTTGCCCCAAGCAGCTGAAGATTCTGTGAA ..x......x.x.x:x.x..::...:..x..:-:...x..x.....---..x.x.---..x.x....:...........:..:.....:........x.....x.....:.....x.....x...........:...........:..........x:.......:............x........:.....:..............x:.. 32M1D13M3D6M3D154M 167/205 81.5% 205/94230402 0.0% 7/205 3.4% 18378283 NA +9853 chr4 + 190214555 42522138 42522137 42522318 181 ATCAACAGAATCATCCACGTACCTTTTCAATCAACTCATAACTCTCTTCGAGTTTGAGTAGCCTGTTCTGCACAGATGTAGATGCTCGCTGATAGACTGCTCGCCACTCCTGAAAGTCGCTCTCTGAAATCTCAGCCACAGCAAAACATAAAGTTCTTAACCCTGAAAAAGATAGCATACA chr4 - 94230402 24130141 24130140 24130320 70100083 70100082 70100262 180 ATCCCCAGAAAACTGCACATACTTTCTCAATTAGTTCATAGCTCTCTTCAAGCTTGAGTGCTCTGTTTTGTATAGCTGTAGAAGCACGGTGATAGACATCTAACCATTCCTGATAATCACTTTCCGAAATCTCAGCCACAGCAAAACACAATGTTCTTAACCCT-AAAGAGAAAGCAGATA ...xx.....xxx.x...:...:..:.....:.::.....:........:..:......:x:.....:..:.:..x......x..x..x........xx..x:...:......x.:..:..:..:.......................:..x............-...:...x....x.:. 164M1D16M 139/180 77.2% 180/94230402 0.0% 1/180 0.6% 18391997 NA +7700 chr4 + 190214555 42524757 42524756 42524931 175 ACTTACCTTCTGTAGCAAACTGCTCTAAATGTTTTAGGGTAATTTCTTTGTATTTTGACGTCTCTGCCAGTCGATCATAAATTACAGTGTCCTGGAAAACAAACA----GAGGGTAAAATGATTTAAT----------TAAGCATTCTGGGTT-------TAATAAAGTTGATGTTGGTAACAATAGCAGTAGGAA chr4 - 94230402 24133657 24133656 24133851 70096552 70096551 70096746 195 ACTCACCTTCTGTAGCAAACTGCTCTAAATGTTTTAAGGTGATTTCTTTGTATTTTGAACTTTCAGCAAGGCGGTCATAAATTACAGTATCCTAAAACATAAATAAAATGAATGCAAACCaatttaataataataataaaaaaGTGCTTTGTTGTGTAGATAATAAAAGTAATGCAGG-AAAAACAGCAGAAAAAA ...:................................:...:.................xx.:..x..x..x..:..............:....::..x.:...:.----..:x.:...x::.......----------x..:x:.x..xx...-------.......:x.:...:x..-..x..:.....x.::.. 105M4I19M10I15M7I18M1D17M 135/174 77.6% 195/94230402 0.0% 22/174 12.6% 18391100 NA +6721 chr4 + 190214555 42543909 42543908 42543998 90 AAACTTACAGCTCCTTTGCAGTAGAGTCGTAACTTTCCAGATGGAGTGCGAACAATCACTGACATTCTTTTCCTAGCACTGAAAGAAAGA chr4 - 94230402 24134753 24134752 24134842 70095561 70095560 70095650 90 AAACTCACAGCTCCTTTGCAGTAGAGCCTTAACTTTCCTGTTGGCGTGCGAACAATCACTGACATTCTCTTCCTAGAGCTGAAAGAGAAA .....:....................:.x.........x.x...x.......................:.......x:........:.:. 90M 79/90 87.8% 90/94230402 0.0% 0/90 0.0% 18409156 NA +5095 chr4 + 190214555 42548838 42548837 42549112 275 ATTTATCTACAGATAATGAGAATAAAAAATGTACTAAAGATTTTGATT-----TAATATTTTGTCTAAACAAAT-TTAGTTAAATAAAAACAAAACATACTTTCTAG-TTATTCAAAAGGGAAAAAATAAAAATGGAT-----------ATAAATTTATCTTATCCATACAAAT---CACTGAGCAGATGTTTTACCTGGTAAACTCCAAGACATTGAGCAATTCATATCTTTCTTCCTGCCCCAGCTAAGAAGAAAAGGAATATATAATTACATACAGTTGGAAAAGTCTTAAGC chr4 - 94230402 24139484 24139483 24139765 70090638 70090637 70090919 282 ATGTCTCTGTAAACATTTTGTAAGAAAAACATAAGTTAGGTCTTAATCAGGTGCATTACTTTGCCTTATCACATATTATAGAAATAAAAGCCAAGC---CTGTACAGCTTGCCTGTAAGAATATAAAAAACCATTAATTTTTATCCATGATAAATTCAACGTATTTTCACAAAAAGACATTAAGTG-----CTTACCTTGTAAATTCTAGCACATTTAGCAGTTCATATCTTTCTTCATGTCCCAACTGAAAAACAAAAGAATTGAAAATTA-ATGCA-----AAAAACCTAAAGC ..x.x...::.:.:.x.xx.x.x:.....::..xxxx..:.:..:..:-----:.x..:....:..x.x..x..-...xxx........:.x..:.---..x.x:..-..:::::x...::x.x...x..xx..x:..-----------.......:.x.x...::x:.....x---..:.:..::-----:......x.....:..:.:x.....x....:...............x..:....:..:.:..:x...:....xx.x.....-..:..-----....::..x.... 48M5I21M1I21M3D8M1I30M11I25M3I9M5D81M1D5M5D13M 173/261 66.3% 282/94230402 0.0% 35/261 13.4% 18409354 NA +6360 chr4 + 190214555 42551192 42551191 42551283 92 ACTTACTGAATCTATAATCACCGAGTCGGGTGTTCTTCCAGTGAAAACAAAATTCAATTGCTTGGCTGCTCTGACCAATGCTCCCTCATCTG chr4 - 94230402 24139876 24139875 24139967 70090436 70090435 70090527 92 ACTTACAGACTCTATAATTACGGAGTCAGGTGTCCTTCCAGTGAATACAAAACGAAGATGCCTGGCTGCTCTGACCAATGCTCCTTCATCTG ......x..x........:..x.....:.....:...........x......:xx.:x...:......................:....... 92M 78/92 84.8% 92/94230402 0.0% 0/92 0.0% 18411316 NA +8818 chr4 + 190214555 42552488 42552487 42552619 132 AATTGCTTCATTTGTACCTGGAGATGCTGCTTGATAAATAATCTTGTCACCTTCTCGCTCTGGCACTGCTGTGTGACAGACTGCCATCATTGTAAGAAATTCACATATTATAGGTGCAGTTGGCTGTGAAAA chr4 - 94230402 24140502 24140501 24140633 70089770 70089769 70089901 132 AATTACTTGACTCTCACCTGGAGATGCTGCTTGATATATAATCTTATCACCTTCTCTTTCTGGAACAGCTGTATGACACACTGCCATCATTGTCAAAAACTCACATATAATAGGTGCAGTCGGCTAAAAAAA ....:...x.:.:x:.....................x........:..........x:.....x..x.....:.....x..............x.:...:........x...........:....:x:.... 132M 110/132 83.3% 132/94230402 0.0% 0/132 0.0% 18411986 NA +6841 chr4 + 190214555 42555937 42555936 42556061 125 AACAAAAAGACAATGGTTT-TATGTAACTTACATGATTATTTTGGAGATTTTCCAGCAATGATGAATCACTAAATGTTTTTTCATCTCCAAACTGTGAGTTCTGCCTGAAGG-----GGGTAAAAAATAGA chr4 - 94230402 24141960 24141959 24142090 70088313 70088312 70088443 131 AAAACAATGATAATTGTTTCTATGTAACTTACATGATTATTTTGAAGATTCTCCAGTAGGGATGAGTCACTAAACATTTTTTCGTCTCCATTTTGTGAGCCCTGCCTAGAAGTAATTTGGTAAAAGAGAGA ..x.x..x..:...x....-........................:.....:.....:.:x.....:........::.......:......xx:......::......::.:.-----x.......:.x... 19M1I92M5I14M 100/125 80.0% 131/94230402 0.0% 6/125 4.8% 18413977 NA +5882 chr4 + 190214555 42569152 42569151 42569383 232 AGAGCTTACCATTCATCAGGAGAGCAGCCATAATCCTCAGGTTCAGGGACATGGCTTCAGA--AAGCAAGA---AGAGAGGCAGAAAGAGAGGAAAAATAATCACAGAAAGGCTGGAAACATAAAACCACGAAGAAGGGA------AGTATAAAAAGATGGATCACTGAAAAGTTAACAAAA-----------TGAACTTTTAGTTGAATCTGAAAGAATGGCAGTTAGTACAGCAAATAGAACATAATGATTC chr4 - 94230402 24144481 24144480 24144727 70085676 70085675 70085922 247 AGAGCTTACCAATCATCTGAAGGAACACTATAGTCCTCAGGTTCAGGGCAATGGCTGCACATGAAGCAAGAGAGGAAGAGAAATAGGGATAGGAAAAAGAAACAC--AAAGGCTAAAAAAATTGGATTATGTATAAAAGAGAAGGCAGTTAATGAAATTAAGTGACTGAAAAAAAAAGTAAAGCTATCTCAACTGAGTATTTTGCTAAAGCCTAAAAAATAACAA--AATACTGCAAA---AATATGATGTTTC ...........x.....x.:..::xx:.:...:...............xx......x..x.--........---::....:x.x.::..x........x..x...--.......::...x..x::.::.:.x.x..::..------...xx.x:..:x.:::.x........:xx..xx...-----------...::x...x.:.:..x.:x...:...::..:--.:...x.....---..:..:...x... 61M2I8M3I31M2D33M6I36M11I32M2D11M3D13M 155/225 68.9% 247/94230402 0.0% 29/225 12.9% 18424671 NA +7910 chr4 + 190214555 42574602 42574601 42574738 137 TAAAGGAAAAAACTCACCCATAAGCAACTCCCGCTATGGTGCACTTCTTAAACTGCATTACATTGCATGTCAGAGTACCAGTTTTGTCAGAAAATATGTATTTAACCTAAA--AAAGTTTAAA--ATTTCTCATTAATATT chr4 - 94230402 24145906 24145905 24146046 70084357 70084356 70084497 141 TATAATAAAATACCTACCCATAAGCAACTCCTGCCACAGTACATTTTTTAAACTGCATGACGTTGCATGTCAGAGTACCCGTTTTATCAGAAAATATGTATTTGACCTAAATGAATGATGAAATCATTATGTATTAATATT ..x.:x....x..::................:..:.::..:..:..:...........x..:.................x.....:.................:.......--..x.x.x...--...x:x:......... 111M2I10M2I16M 112/137 81.8% 141/94230402 0.0% 4/137 2.9% 18428696 NA +5797 chr4 + 190214555 42575617 42575616 42575714 98 TTTACCTGGCCAAGTTCCTCATTCAGATTAGATGTTCGAGCCATAGCAGCAGTGTCTGTGGGTTCATAGTGCATGTCAAGATCCTTTAATAAAATTAA chr4 - 94230402 24146725 24146724 24146822 70083581 70083580 70083678 98 TCTACCTGTCCAAGTTCCTCATTGAGGTTGGAAGTACGAGCCATTGCAGCAGTGTCAGTAGGTTCATAATGCATGTCTATGTCCTACAGGAAAAATGA .:......x..............x..:..:..x..x........x...........x..:........:........x.x:....x:.:x....x.:. 98M 78/98 79.6% 98/94230402 0.0% 0/98 0.0% 18428892 NA +9642 chr4 + 190214555 42578252 42578251 42578390 139 ATATTTACCCAATTTATGAAGTATGCCTGGGTAAATTTCACAACTTCTAATGTAACCAATAAGCTGATAGGAATGAGATTGTTGAAAAGGATGATGAAGGTCAAGAAATTCAGTCCAAAATTACTAGCGCCACCATCTG chr4 - 94230402 24148435 24148434 24148573 70081830 70081829 70081968 139 atatttaCCCAATTTATGAAATATGCTTGGATAAATTTAACAACTTCAAGTGTAACCAACAAACTGATAGGAATTAGATTATTGAAGAGAATGATAAAAGTCAAGAAGTTTAAACCGAAGTTGCTTGCTCCACCATCTG ....................:.....:...:.......x........x.:.........:..:...........x.....:.....:..:.....:..:........:..:.:x..:..:..:..x..x.......... 139M 116/139 83.5% 139/94230402 0.0% 0/139 0.0% 18429817 NA +12938 chr4 + 190214555 42579799 42579798 42580016 218 ACTTTATTGCTTACAGTTTAGATTGAGATACCAGTCTTTTCCAGAATGCCTTCGATTCCAAATGGCTGAGCCCACAGAACAGACAAGAGACATGGCAATTAAGATACAAAATAAAATCAAAATTTGTACATTTGTAATCCGTTCCACATTTGAGAGCTTAAGTGGTGGACTTGTTGAATTCTGTAAAA---AGAAACAAGA--TGAGTAATAAAAAATGTACA chr4 - 94230402 24150252 24150251 24150474 70079929 70079928 70080151 223 ACTTTACAGCTTACAATTTAGATCAAGATACCAATCTCTTTCAGAATGCCTTCGATTCCATACAGCTGAACCAATAGAGCAGATCAAAGACATGGCAATAAGGATGCAGAAAAGAATCAAAATCTGAATATTCGTAATTCGTTCCACATTAGACATTTTAAGAGGTGGACTTGTTGAATTCTGCAAAAGACAGAAAACAGAAGTGGCCATTAAAAGATGTACA ......:x.......:.......::........:...:..:...................x.::.....:..x.:...:....:x.:............x.:...:..:..x.:.........:..x.:...:.....:...........x..x.x:.....x....................:....---.....xx...--..:x:.x.....:....... 188M3I10M2I20M 176/218 80.7% 223/94230402 0.0% 5/218 2.3% 18429547 NA +8700 chr4 + 190214555 42581619 42581618 42581738 120 ACCTGCATCAGCTTGGTGTCATGTCCAGTGTAGACAACTATTCCATGAACCCACTGTGTATTTCTCAACTGAGCTCCTCGAAGAAGAATCTGATCTGCTCCCAGTGGAACGGTGCTAGGA chr4 - 94230402 24151301 24151300 24151420 70078983 70078982 70079102 120 ACCTGCATAAGTTTTGTGTCATGTCCTGTATAGACAACAATCCCATGAACCCACTGAGTATTTCTCAACTGAGCTCCTCGTAGAAGAATCTGGTCAGATCCCAATGGAACAGTACTAGAA ........x..:..x...........x..:........x..:..............x.......................x...........:..x.x.....:......:..:....:. 120M 104/120 86.7% 120/94230402 0.0% 0/120 0.0% 18430318 NA +9273 chr4 + 190214555 42586340 42586339 42586479 140 TTTACATACCCATGTCCATCAAGCCTTATGTTTCCAACAAAATCGTAGAGATGTCTGTTTGGACTTTCACACTCAATTCTGCCAGAAATCCTCATCAAACTGTCAACGTCTTTGATATCTGATGTTGCTGGTAAGCCCTG chr4 - 94230402 24155623 24155622 24155762 70074641 70074640 70074780 140 TTTACATACCCATGCCCATCCAGTCTGATGTTTCCAACAAAGTCATACAGATGTCGGTTTGGGCTCTCACATTCAATTCTGCCTGAAAGTCTCATCAAACTTTCTATGTCCTTTATATCTGATGTTAGGGGCAAACCCTG ..............:.....x..:..x..............:..:..x.......x......:..:.....:...........x....x:...........x..x.:...:..x............:xx..:..:..... 140M 116/140 82.9% 140/94230402 0.0% 0/140 0.0% 18430717 NA +6128 chr4 + 190214555 42588254 42588253 42588333 80 TCTTACCTGTCTAATTTTCAAGTTTGTTTCACCATCTAAGTTGGATGTTTCAATGTAGCACATGGCTTGGGGCTCACTGT chr4 - 94230402 24156369 24156368 24156448 70073955 70073954 70074034 80 TCCTACCTGTCGAATTTTTAAGTTTGTCTCACCATCTAAGTTAGATGTTTCGATGTAGCACATAGCTTGTGGTTCACTAT ..:........x......:........:..............:........:...........:.....x..:.....:. 80M 70/80 87.5% 80/94230402 0.0% 0/80 0.0% 18431885 NA +19806 chr4 + 190214555 42590003 42590002 42591074 1072 TGAAGCAATTCTTAATAGTGCTGTGAAAAGGCAGCAA-GAAGTCTCAGATAAGGAATCATGCTAGATCATAAATATTTCAGCAAATTATGATGACATCTAAAACACA--AACTAGTCAAGAGAGGCAAAGCAGGCTTTTTGATTAGTAAGTGAAAAATGAAACAAGATGCATATCACAATACAGTCACTAGTAGACAGCTGAAATTGATCACAGTAACGTGCACTTTGTCACTAGATACAAGTGGGATAAAA--GTCGATCCCAAAGCATGCGGTACAAAATGTGCAACATCCAGCTTTGTGCAGGGGGTCCTCTATAAACCCTATGAGCCCAAATTATAGTC-ACAATCGCTGGAAGGATTTTACAGAACTTACAGAAAAATTTAAAATACAAGAATAAGACATGTTTATAATCTAATCAATTTTCAATGACTGTTTCATGAAAAGCTTAACATTATTCAAAATAATATCCCGGAGAGATAATAAA---TTAAGCCTTAGTACTTAGGCATGTTATTA--------AATACGAATATATATTAATGGTGCACAGGAAATTAAAATCTACCTTTACTGTCATGCCTCTTAGACTCCTATTGATAACAACAGGAGTTCAATTTGCCCA-----GCTGAAGGACAAGCATCAGTCAACATAGTATTCAAAAATCCCTTTAAAACATCTGTGAAATGTCCATCACCAAGCAGTATAAAAAGTTTGTGTTTTAAAGGAAGAGACACAGAACTCAACCATATTTGGGTGCAACTGTTCTCCGGTTTACGGTGAGGACCCACATACACGCATCCTATACGACTCAGTGGTTCTAACCTTGAGGACAGACTGATGAGATCTGCTGGGAGATGTTCCCCATTGGTCACTTTCACTATCTCCCCTACTGCCACCTACACGTCCCAGTAT-AAAATAATTAAAATGGCCAAAAAAAAAAATGAACAGAGGAAAAAAAAC-------------AAACAAATGGACA-----AAAGAGACAGAAAGTTCGAAATTATTATAGAAAATAATACATGTTAATAAAAACATCTAATGCCAATTTTTTTCAAAACTTATTTTGATCAGGTCTGAAGGCATAAGAAAACA chr4 - 94230402 24157688 24157687 24158601 70071802 70071801 70072715 914 TGAAGCACTTTTAAGAAAGACT-----AGGACAGCAAAGACATTTCCAGTGAAACA-CATGCTCAATTGTAATTACTTTAGCAGATAGCAGTGACCTCCAAAGTAAATGAATTA--CAGCTGGATCAAGGCAGGCCCATTGATTT---AGTGAAAAA-AAAACAAAGT-CTGGTAACAGTGCAGACAATAGCATAAAGCTGACAT--GTCTAGGAAACATGCATTTTGTCACAGTACACAAG---GACAGCGCTGCTTTTGCCACTGCATGCAGCAGAGAATGTGCAACATTCAAATTTGTGCAGAGGGTCCTCTACCAGCCCTA------CCAATAATGTTCTATAATC-----------TTCACTGAA-----------------AATACGAG-----------TTGGTGCTTTACTCTGTGTTTA-------TTTAATGACAA-------CTTGTCTGATAAGATTTCACGAGGATAGTGTAAAATCTTAAAAAGAAGGTCTGGAACAAGTTCTTGCTTCTTGGAGAATTACCATCTATTTACGCTTTAAAGGA--TCTGCACTTACATCAACTGT---ACCTTTTCTAATTTTATAAATG----CGTGGGTT----TTGCTCAAGAAAGATGAATGGCAA-----AGCAAACA---------------CTACCAACACAT-------------------AAGCATTCTTTATAGTTGGTAT-----------------------------------------------------------ATGAGGACCCACATACACATATCCTGTGCAACTGGTTTATTCTAACCTTGACGACAGACTGATGAGATCAGCTGGGAGATGTTCCCCATTGGTCACTTTCACTACTTCCCCTACTGCCACCTACACATCCCAGTTTGAAAATGATTagaa----cagaaatataagtgataggggaaaaaaaaacaaaacaaaaaagaaaacaaatggacaaagacaaaaaGACAG--AGTTTGAAATTATTATA-CAAACAATATATGTTAATTAAAATATCTGATGAC-ATTTTTTTCAAAATCTATTTTTATCAGGTCAGAA---ATAAAAGAATA .......x..:.x.:x.:x:..-----.:.:......-..x:.:..x::.:.::x.-......x:..::...x..:..:....:..x::::....x..:...::.x.--..:..--..:xx.::x...:......::x......x---.........-:......::.-.xx:.x...:.:...x..x...:.x.x......x..--:..xx:.x...:....:........x:x.:.....---..:.:x:--.::xx.x...xx......:.:.x.:............:..:x.........:..........:x.:.....------.x...x..:x..-.:....-----------..:..x...-----------------.....:..-----------..x:.:x.:..x..x:.x..:.-------...x....x..-------x..:.:::.x.x:..x..x..::..x.xx:....---....:xxxx..xx..x:::..x...x..:--------.:x.:x.x:..x....x.:.x.x:.x....--.:x:x.::...x.:x.....---:...:..xx.x.::...x:..:----.:x.:...----....:..-----.x....x.:...-----..:x....---------------.:x::..x....-------------------.....x.x.xx.x....x..:.-----------------------------------------------------------:.................::.....:.:.:...x:x.x:............x.................x..................................::....................:.......x.-.....:....:..----..:...x.x..:...xx:.:.:.........-------------.............-----...:......--....:............-x...:....:........x....:....:...x.-.............::......x........x...---....:.:..:. 22M5D10M1I18M1D50M2I5M2D29M3D9M1D10M1D36M2D35M3D7M2I71M6D12M1I6M11D9M17D8M11D22M7D11M7D34M3I29M8I30M2D20M3D22M4D8M4D7M5I12M5D8M15D12M19D22M59D136M1I13M4D31M13I13M5I10M2D17M1D34M1D34M3D11M 628/873 71.9% 914/94230402 0.0% 240/873 27.5% 18432315 NA +5523 chr4 + 190214555 42593522 42593521 42593637 116 TGACCTGATTAAATAAATTTTGAAAAAAGGACACTGTCCATAT--TCATATGTGGATTTAC-AAATAAACCTGTCCAAGGAAATGATGATAAACAACCTCTAA-----AATATTAAAAACAATT chr4 - 94230402 24160315 24160314 24160437 70069966 70069965 70070088 123 TGACCTGATCAAATAGATGTTGAAAAATGTTCATCTTCCACATAGTAAGATGTGGATTTCTTAAATAAGACTGTCCAAGGAAATGATGATAAACAATCTCTGACCGTCCATA-TGAAAACAATT .........:.....:..x........x.xx..::x....:..--.x.x..........x:-......:x..........................:....:.-----x...-.:......... 43M2I16M1I41M5I4M1D11M 95/115 82.6% 123/94230402 0.0% 9/115 7.8% 18433207 NA +15484 chr4 + 190214555 42594191 42594190 42594441 251 TCTTCGTTTATTCCTTATTTCCTTGGAGAAATCACAAG-------------------GTCAATGCAGGGTAGAGAAACCATCCTCTACACTGTTTGAGCATCAGTAGGCATCTCTACCTTGATGAGAGAAGTACAGTGTCAGCAGGTATATACTCTTTGCCTTTTATTATAACTATATCTCCAACATTTACCTGAAAGAAAACTGGGAATTGGTTAATTATCTGCATTGAAAGATAGTTACAAATATACAACCCATTGTAAAAAGCATAG chr4 - 94230402 24160890 24160889 24161146 70069257 70069256 70069513 257 TTTTTGTTTATTCCTTATTTCCTTGGAGCAATCACaaataaataaataaataaataaataaatGCAGGGTAGAGAAACCAGCCTCTACACTAT--AAGCATCAGTGGGCATCTCTACCTTGATGAGAGCAGTACAGTGTCAGCAGGTATATACTCTTTGCCTTTTATTATAACTATATCTCCAACATCTACCTGAAAGAAAACTGGGAATTGGTTAATGGTCTCAAACAAAATAT-GTTAT----------CCCTTTGTTTTAAGCACAG .:..:.......................x........:-------------------:.x....................x..........:.--:.........:......................x..........................................................:..............................x:...xx.x::...x..-....:----------...x....xxx.....:.. 38M19I36M2D140M1D5M10D19M 212/238 89.1% 257/94230402 0.0% 32/238 13.4% 18433301 NA +4490 chr4 + 190214555 42600455 42600454 42600607 153 ACAAAATAAAAATCAGTGCATACCTTTTCCCAGTGGACAATTTCCCAAGCACCATTTCTCAAAACTGGAAAGAGAAAAGGTG----------ACATTTTAA--ACAACAT--------------GTTTTACTATGAAAAGGCCATTTCTGATGAA--------ATAATAATTTTAAACGAATAGCTT chr4 - 94230402 24161959 24161958 24162143 70068260 70068259 70068444 185 ACCAAGAAAATATAAATACACACCTTTTCCCAGTGGACAATCTCCCATGCACCATTTCGTAGTACTGAAAAAAAGAAGAATTCTCCATTTGCACACTCTAACTGCAGTATATACGTTTGTGGTAGTTTCCTTATGAAAA-GCCA-TTCAGATGGAGCACATTTACAGAACATTTAAACGCATACCTT ..x..:x...x..x.:.:..:....................:.....x..........x:.:x....:...:.::..:::.x----------...:.:...--:..::..--------------....:x:........-....-...x....:.--------.:.:x.xx........x...x... 82M10I9M2I7M14I15M1D4M1D10M8I24M 112/151 74.2% 185/94230402 0.0% 36/151 23.8% 18438496 NA +3002 chr4 + 190214555 42600846 42600845 42600900 55 AAAACATTTCAGATGCTACAAGAGTAGCAATGTTTAAAAAGAAAAATCACAAGCA chr4 - 94230402 11166373 11166372 11166427 83063976 83063975 83064030 55 AAAATACTTCAAATGCCACAGAAGGATAAATGTATAAGAATAACAATCACAAGCA ....:.:....:....:...::..x.xx.....x...:..x..x........... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 31434473 NA +4965 chr4 + 190214555 42616022 42616021 42616094 73 AAAATTCCTACCTTGCGTTTGTTTCTTGTTCACTGCATTATCAGCTTTATGTCGTTTCTAAAGTTTAAAAGCA chr4 - 94230402 24164567 24164566 24164639 70065764 70065763 70065836 73 AAGTTTCCTACCTTGAGTTTGTTTCTTGTTCACCGCATTATCAGCTTTATGCCTTTTCTGAATCAAAAAAGCA ..:x...........x.................:.................:.x.....:..x:xx....... 73M 62/73 84.9% 73/94230402 0.0% 0/73 0.0% 18451455 NA +10170 chr4 + 190214555 42624523 42624522 42625733 1211 ATAGAATACTTACAATATCTTCTATTATCTCTTTGATAGCTGCCACAGCTAAAATAAATAAGAGAGGAACCAGTGTTGTATAACGACCTGTTGGTGACACATCAGGTATTTGCTGTTTGGAAAAAAAAAAAAAAGAGAAATCCAATG-AGAACTAGAAAA-----TTTATAATAGATTCAAGAAAACAGTCTCAGTGCCTTCTAAA-------ATATGCCTCACTGATTTTACTATCTTG-------GCCGACTAATGCTGAGTGAGG--TAATGTGTTCGTATCTAATAA-----GTACTGGAAAAGCATGTTAATTAGTTTCACAGTAAGCAGTTG----TATATAGGACTACAACCTCCATTGGAAGACTGGTTACAT------------AAGTTACAGT---ATATCTATTCATTAAAATATAACTATT--------------------AAAAT--------------GATATTTTAGAAACACAATGAATAACTGGGAAAATATCCATACATTGTTATATGAATACAG-CAGGTAACAAAACAATAGGTATTCTATGATCCCCTTTTTGTAAACG---AAGTCAATAAACGATGCTTGGGAGGAAAAAAAAAAAAAAAAAGACCAGAAG----------------GATATATACCCACAATTTAAGAGTAGTTGTCT---------------CTGATGGTAG-AATAAT-------GAGAGTTT-----------TAAATTT-------------TTTTCCTTGTGTTT----TGTGGTGTTTTAAAAATTTTTTATTTTCAAGT------TCAATG-----AAAATATTTTTTCAA-------------ATTTAAGCATATGTTCAATATGCTACTTTTTAATAAACTAAAACTTTTTCTGACTACAACTAATTTAAATAC--AAAGAGAAGCACAAGATTTAACTTCTTGCATTCTAAGGTTCAGAGTTGATACTTTTACTATGAAAATTAGCATTTTAAGAAAACGTCCCATCCCCTTTACCACCCAAAATGAACAGTCCTTGCCACATCAAATTTATAGAACACCCAAAATAAGCTGATAAAAATGAATCAAAAGGCTGGAAAAGGTAGTGGATTCCAACACTG-----------CTTGCAGCAGGAGCCAGAAATGT------------CCA--CCAAAACCAGCTTATCTCTCGGCATTTACATAAACCTCAGGGG-------ATTGGTCACGGGC----TTAACATTTATTAGT---ACCTGAACATTTGACAAGGTTTTATGACGTGACTTTACCTGCAGCAGTGCAATAAAGAGAAAAAATGAATTAGCAGCTCTTCTGAACTGAGAGTAGAGAAATCTTGGAAGGAATGTGATTATGTTGTATTTTGCAGTGCTAGAAAACAAAAATGAAAA chr4 - 94230402 24166468 24166467 24167823 70062580 70062579 70063935 1356 ATTAAATACTTACAATATCCTCTATTATCTCCTTCACTGCGGCTACGGCTAAAATAAATAAGAGAGGGACCAAAGTTGTGTAACGGCCTGTTGGTGATACATCTGGAATTTGCTATTAAAAAGAGAGAAAAAAATTGTGCTTGAATTCCTGATTAGAAACATTTTTTTTTAACACAGTAAATAGAAC--TTTCAACTTTTCTTGAAAACACAGAGATGAC-AACTAGGTTTGTTACTCAGACACAGTACTGACTATTTCCAAGTGAGGGATATTGTATTAGAATCAAACAAAGCTGATACAACAAAA-CATTTTA---AATTGAACAGTATTCAGTAGTTACTGTCAGAGGTTTTAGCATCTCCAGAAGGTTCACCTTCATCTTTTGTGTTTCaaattaaatttaaatatgtattca-taaaatataattattttttttCAGTTTAGTCTAACAGAGTGGACACAACTCCAAGGTATTTTAAATTTAAAGAAGATATTTTGTATTTTACTACTAAACTAATGAACTGATATTGAAAAGCTACACAACTCTAAGAA-------ATCCCTTTCTGCTAAGCAAGCAAGGGCACAGATGATGCAAGTCAATGTGTATGTAAAATAAATGCTGAGAAGATGCAGCTACTTATGTGATACATATTTATAA-TTATCTGTAATTATCTTTATATTGACTAGAGTTAGTGGCAGCAGTGATTTACCACAAGAGTATTCCTGCCTTAATACATTTAGAACAGGCAATGCTGCCCATATGACTACAATGAGATTTTACAGAAAAAGTGGAGTAGTAAGTAGTGCCTCAGTGTAGTTAGAACATATCCTCAATTTATCATAAAAGGTTTACAAAAACAGTCAATGT-----TATTTATTACAC----ATTTATTTTTTCTATCACTACATTGTGTACCTGAAAGAAAACACAATGTT-----------ATTGTA----------TATACGCTGTTTTTCTTGGAATAAGA----TGAATACACGT-CTATTTTCAATATTACCC------TACACCACATTTTAAAGCAACTATGTGGAAACCCAGCACAAAGTTAATGGACAACTTTCTGTTAGCT--ACAGGGCAATAGTATCCACCACTTCTCCAGTTCTCCTTTCATTTCTAGTCACACATGTGCCTACACACTCCCATTCTAATGGCACATTATTTTCCAGGCAAAATATGAAATCAAAGGGGCACCATATTGTACCCTGGTTCTATTACCCTTTACCTGTTACTCCTGCTCACTTACTGA------------TGCTCTTACCTGAAGTAGTGCAATAAAAAGAAAAAATGCATTGGCAGCTCTTCTGAACTGGGAATAAAGGAACCTTGGCAGGAATGTGATAATGTTGTACTTTGCAGTGCTAAGACAAAAAGACAAAAA ..x:...............:...........:..x.:x..x..:..:....................:....:x.....:.....:...........:.....x..x.......:..x::..:.:.:.......xx.x:x.:x...x-xx:.:......x-----...x...:.x.x.x..x.:...--.:...::x::.::.:..-------.x...x.-x...::x...::..:::x.-------:.:.....x.x.::.......--..x...:..x.x...x..:..-----:...x:x....-...x...---.:..xx......xx....x.----.:.xx::.::.x:.:.x..:x:x.:.:.x:::x:.x...------------..:...x.x.---....x......-..........:....--------------------.:.:.--------------.:.......:.xx:.x.:x::...x:.x.x.xxx..::xx..x.:.:x.:x.:x:...:x.-x.:.:x...x...xx..:.x.-------.....:..:.xx...:.:---...xxx.:.:.:.....xx.xx.:x:x:x.x:x....x...x.x:x.....----------------....:...:::.:..-...xxx...:..:...---------------:.::...:..-.:.:..-------:.....x.-----------..x....-------------:.x:..x.:..x:.----..x.:.x..x:.:...xxx.xx.x.xx:....------...:..-----.:..:..x.::....-------------:....x:x.x.::x.....:.-----.x....x..x..----.:..x..:.xx...:x....xx..:x:...--:..:::..:.....x:..-----------...x..----------.xx.::..x..x:.x.x::...x..x----.:.:x.x....-.:..:::.xx..::....------x...x:x.x.x::.x.x...x.x.:.:...xx..x:x.xx...:.:..::.x.xxxx..x:xx:...--.x.:..:.:.:.xx....x....x-----------...x..x:xxx..:..x.x....------------...--.:..x:x..xx....:.::.:.xxxxx.:..:..x::x.:...-------....xx.x.x..:----...x.x....::x..---x....xx..:..:x::.------------..x::.......x..:...........:..........x...:.................:..:..:..:..:.....x...........x........:............::.x.x...:.::.... 147M1I12M5I22M2D17M7I7M1D19M7I21M2I21M5I11M1D7M3D20M4I39M12I10M3I11M1D15M20I5M14I61M1I21M7D18M3I51M16I15M1D16M15I10M1I6M7I8M11I7M13I14M4I32M6I6M5I15M13I21M5D12M4D30M2I18M11D6M10D26M4D11M1D18M6D67M2D24M11I23M12I3M2I43M7I13M4I15M3I17M12D129M 729/1140 63.9% 1356/94230402 0.0% 287/1140 25.2% 18458055 NA +9751 chr4 + 190214555 42626992 42626991 42627302 311 TACCTGACATGGTTATTGCAGAATTTTGTCAGCTGGGGCTGGTTGATGAAAATAGTCCTTACTTCCTCCTGGTCAGCCAGTGAGGTCTTCTCTGAAACATCATCTGTCTTCTCATAACCTT------------AAAAAGAGATCTTCTTATTGTACAAGAAATGT---------------TTTATTGTCCAGACC--------AAAAACAGATTTCATAACTAGTCTAGAATATGAAATCTGTTAAAAGCTACTTGCTTCCCCTTAACTGTTGTTTCTTTTATAATAAAAAGTAACATCCCCATATTTAACATTTCTACTAGATTTAAAGGGCAGCATTTAACAGT chr4 - 94230402 24169956 24169955 24170254 70060149 70060148 70060447 299 TACCTGACATGATTATTGCAGAATTTGGTTAACTGGGGCTGATTGATGAATATAGTTCTCAATTCTTCTTGATCAGCCAGAGAAGTTTTCTCTGAAACATCATCTGTCTTCTCATAGCCTGTTAAAAAAGAAAAAAAAAGGATTGTTTTAATATA-AGTAAATGTACACATACACACACATACAAGACCTAGAGCATTTCATGACAAAAAGATCTCACATCTATTTT-GAATGTGAACTC------AATCTACTTG---------------TGTTTC--TTACAATAACAGGTAATGTTC----------------------ATTTAAAAAATAGCATTTTAAAAT ...........:..............x..:.:.........:........x.....:..:.x...:..:..:........x..:..:.............................:...x------------.....::...:x.:...x.:..-.:x......---------------.x:.xx::.:...x.--------.x...x....:...:.x...x.:.-....:....x..------..x.......---------------......--...:.....x.:....::.:.----------------------.......::::.......x.x.:. 121M12I22M1D9M15I15M8I24M1D12M6D10M15D6M2D21M22D24M 207/264 78.4% 299/94230402 0.0% 82/264 31.1% 18457036 NA +3534 chr4 + 190214555 42635649 42635648 42635780 132 ATAATTGAAAGTCCTGAATATATATATGCACACATATGTATTTGTATAT------------ATTGTTTTGATACAGAAGCTT---------AAGAATATATACATACACACATATATACATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964738 14964737 14964884 79265519 79265518 79265665 147 ATAAATACAAGTGCTGAGCACTTA------CAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....x.:x....x....::.:x..------..x.x...:.......:.:------------.x..:x..x...:...:.:x.---------..:x..:.x.:.:.:::....::.:..::......:.xx........::............. 24M6D19M12I21M9I62M 86/126 68.3% 147/94230402 0.0% 27/126 21.4% 27670911 NA +3684 chr4 + 190214555 42635673 42635672 42635789 117 TATGCACACATATGTATTTGTATATATTGTTTTGATACAGAAGCTTAAGAATATATACATACACACATATATACATATATATACACACACACACACACACACACACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATAC---------ACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:....::.....x:..x:::.....:---------........x.:..x.:...:::...x::...::x:..:..:.:x:....:.:.x.:..:.x....x.x........:.... 27M9D81M 70/108 64.8% 108/94230402 0.0% 9/108 8.3% -30485429 -63744973 +3650 chr4 + 190214555 42635703 42635702 42635773 71 TTTGATACAGAAGCTTAAGAATATATACATACACACATATATACATATATATACACACACACACACACACA chr4 - 94230402 7596409 7596408 7596479 86633924 86633923 86633994 71 TTCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:x.......x..x..x:...:....:.:....:...:......x.:......x:..:...:...:.x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 35039294 NA +3189 chr4 + 190214555 42635723 42635722 42635787 65 ATATATACATACACACATATATACATATATATAC----------ACACACACACACACACACACACACACATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:....x...::...x.......:...:.----------.................x.....x.::x... 34M10I31M 51/65 78.5% 75/94230402 0.0% 10/65 15.4% 34239927 NA +3017 chr4 + 190214555 42635732 42635731 42635778 47 TACACACATATATACATATATATACACACACACACACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.....:.:...::.....:.xx........::............. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 27670894 NA +3199 chr4 + 190214555 42635737 42635736 42635817 81 ACATATATACATATATATACACACACACACACACACACACACACACATATATATATATATATATATATATATATACACATG chr4 - 94230402 89016082 89016081 89016162 5214241 5214240 5214321 81 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTG .::.::.:....x.::..:.........::x::.:........::..x..::...:.::..x..:.:.:.::.x....x.. 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% -46380345 -47850057 +3348 chr4 + 190214555 42635739 42635738 42635829 91 ATATATACATATATATACACACACACACACACACACACACACACATATATATATATAT--ATATATATATATATACACATGTATGTATGTATG chr4 - 94230402 4417343 4417342 4417435 89812968 89812967 89813060 93 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG ..x..x.........:...........x:x...:..:..::x:x:.x.::.:..:...--.x::..x..x..........:.x.:.x.:.... 58M2I33M 62/91 68.1% 93/94230402 0.0% 2/91 2.2% 38218396 NA +3006 chr4 + 190214555 42635746 42635745 42635801 56 CATATATATACACACACACACACACACACACACACACATATATATATATATATATA chr4 - 94230402 66904846 66904845 66904901 27325502 27325501 27325557 56 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA .......:...::.........:...........:.:x..x:.x:.x:.:....:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -24269100 -69961302 +3031 chr4 + 190214555 42635749 42635748 42635813 65 ATATATACACACACACACACACACACACACACACATATATATATATATATATATATATATATACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......::..::.........:...........:..x..x:.x:.x:.:....:.xx:...::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -24269098 -69961304 +3014 chr4 + 190214555 42635750 42635749 42635802 53 TATATACACACACACACACACACACACACACACATATATATATATATATATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x..x...........x.........:x:...::...:..::....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -44736991 -49493411 +3253 chr4 + 190214555 42635751 42635750 42635816 66 ATATACACACACACACACACACACACACACACATATATATATATATATATATATATATATACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .....:::..::.........:..............x..x:.x:.x:.:....:.xx:....:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -24269096 -69961306 +3014 chr4 + 190214555 42635752 42635751 42635804 53 TATACACACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x:x..x...........x.........:x....::...:..::....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -44736989 -49493413 +3131 chr4 + 190214555 42635760 42635759 42635806 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -44736987 -49493415 +5534 chr4 + 190214555 42656804 42656803 42657042 239 CGAGCCTCGGCGGCCCCTTACCTTCGGCGCGCGAGCGGATCTCCGACACGGTCCTCCGCATGGTGGGCATCGCGGC---------GGCGGCTGCAGGTGGGTCCTCAGCCCGGACTCTGCACCTGT--------CACGGCGTGGTACACGCGG-GAGACCCGGCTGCGCCGCGCAGAGCGCTCAGCTGCAGCCTGGGCCGCGCCGCCGCCCACCTAGGGCAGAG---------CTGCCGCCGGGCGCG--GCCCCCGCACGCCGACAG chr4 - 94230402 24180754 24180753 24180998 70049405 70049404 70049649 245 CGGGCGCCGGGCGGCACTTACCCTCCGCGCGGGAGCGGATCTCCGACACCGTCTTCTGCACCGCCGGCATCGCAGCAGAGCGCGGGGCGGCGGCA-------CGGCCGCGCTGCACCTGCGCCTGTccccgccgcccggcggagcgc-cgcggcgagagccgg----gccccgggcTGCGCTCAGCGGCG----GGACTGCGGCGCCG-------GAGGCAGAGGGCTCGCGCCTCCCTCCGCTCGCGCCGCCGCTGCTTTCCGACAG ..:..x:...xx.x.x......:..x.....x.................x...:..:...:x.:x........:..---------......x...-------.xx.x..x.x.xx:....:.....--------.x.....x:.::.-.....-....x....----...x..x:xx.........x..:----..:.:...x.....-------::.......---------..x..x...xx....--...x.:..x:x....... 76M9I10M7D24M8I13M1D5M1I9M4D23M4D14M7D9M9I15M2I18M 161/216 74.5% 245/94230402 0.0% 52/216 24.1% 18476050 NA +3093 chr4 + 190214555 42711148 42711147 42711200 53 ATTCAGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 45067217 45067216 45067269 49163134 49163133 49163186 53 ATTTGGATATATACGTGTGTTTGTTGGTTTGTTCTTTTTTTTTTTTTTTCTTT ...::.:.x.x.x:..x........x.......:...............:... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -2356069 -91874333 +3026 chr4 + 190214555 42711155 42711154 42711195 41 TTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTT chr4 - 94230402 56809518 56809517 56809558 37420845 37420844 37420885 41 TTCCTTTATTTGTTTGTTCATTTGTTTTTTTTTTTTCTTTT ..::...:..........::................:.... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -14098363 -80132039 +3258 chr4 + 190214555 42711159 42711158 42711208 50 TTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTAAGATGTA chr4 - 94230402 35056090 35056089 35056139 59174264 59174263 59174313 50 TTTGTTTGTTTGTTTCTTTGTTTTGTTTCATTTTTTTTTTCTGAGAAATA ...............x........x...:x..........:.:...x:.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 7655069 NA +3200 chr4 + 190214555 42713677 42713676 42713735 59 GGACCTGTGGGCGTGTGGGTGCATGCGCACATGTGTGCATATGTGTGTACATACACACA chr4 - 94230402 84261998 84261997 84262056 9968347 9968346 9968405 59 GGGCCTGTAGGCATGTGTGTGCAAACACAAAGGTGTGCACATGCATACACACACACTCA ..:.....:...:....x.....x:.:..x.x.......:...::.::...:....x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -41548321 -52682081 +3396 chr4 + 190214555 42726686 42726685 42726786 101 TGGCATGATCTTAGCTCCCTGCAACCTCTGCCTTCAGGGTTCAAGTGATTCTCATGCCTCAGCCTCTGGAGTAGCTGTGAATACAGGCACGTGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ......x..x..------..:..:..:xx:x....x...........x...x..x.x........:.x:........x:.x....--.::.::....::.. 12M6D67M2D14M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 24529572 NA +3325 chr4 + 190214555 42739554 42739553 42739630 77 TGTAGAGGAACAAAAACAAACAAACAAACAAACAAACAAAAAACCACGAACAAAGTAAGCTGAAGCTAGCAGAAAAA chr4 - 94230402 38540315 38540314 38540389 55690014 55690013 55690088 75 TGGGGAAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAATTATCTGGATCT--CAGTAAAA ..x:..::.......xx..........:........x......:..x.:.x:..:.x.x...:.x..--...x.... 67M2D8M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 4199239 NA +3052 chr4 + 190214555 42739562 42739561 42739607 46 AACAAAAACAAACAAACAAACAAACAAACAAAAAACCACGAACAAA chr4 - 94230402 51198566 51198565 51198611 43031792 43031791 43031837 46 AAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGGAAA ..x....x....x...:......................:.:x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -8459004 -85771398 +3550 chr4 + 190214555 42762967 42762966 42763081 115 AATACATAATACAACATATATATGTATATATATACACATATATATGTA----TATGTGTATATATACACATATATATGTATATGTGTATATATACACATATATGTATATACTTAATATA chr4 - 94230402 40224606 40224605 40224723 54005680 54005679 54005797 118 AACACACAAACTAGCACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATA ..:...:..xx:.:..:..:...:x.xx..-....x:...:.......----.x....:.xxx:x...x..x.x.:...:.:.......:....:.:.x...::...:.::.:...... 30M1D17M4I67M 76/114 66.7% 118/94230402 0.0% 5/114 4.4% 2538361 NA +3022 chr4 + 190214555 42762970 42762969 42763053 84 ACATAATACAACATATATATGTATATATATACACATATATATGTATATGTGTATATATACACATATATATGTATATGTGTATAT chr4 - 94230402 51537736 51537735 51537819 42692584 42692583 42692667 84 ACATAATTAAACATATAGATGTATGTATTTCTGTGTCCGTTTATATATATTTCAGTATAAATTTATTTCTGTAGATGGGTATAT .......xx........x......:...x.x::::.x::.x.:.....:.x.xx:....x.:x...x.x....x...x...... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% -8774766 -85455636 +3457 chr4 + 190214555 42783764 42783763 42783838 75 GTGTTGAGTATGTATGTATGTATGTATGTATGTATATATATATATATACACACACACACACGCACAGAGACACAC chr4 - 94230402 14964810 14964809 14964884 79265519 79265518 79265593 75 GTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......x.x.:::.x:.....x..::...::::.::.:...:........xx........:.....x.x...... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 27818954 NA +3117 chr4 + 190214555 42783768 42783767 42783831 64 TGAGTATGTATGTATGTATGTATGTATGTATATATATATATATACACACACACACACGCACAGA chr4 - 94230402 8395801 8395800 8395864 85834539 85834538 85834602 64 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ..x:..x::......x..::........:x..:..xx...:.:.............x:....:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 34387967 NA +3322 chr4 + 190214555 42783768 42783767 42783837 70 TGAGTATGTATGTATG--TATGTATGTATGTATATATATATATATACACACACACACACGCACAGAGACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x......:..:..:--:......x..::...:...::x..:..xx.:..........:....x....... 16M2I54M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% 34387977 NA +3487 chr4 + 190214555 42783773 42783772 42783861 89 ATGTATGTATGTATGTATG--TATGTATATATATATATATACACACACACACACGCACAGAGACACACACACACACACACACACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATAC--------ACACACACACACACAGACACAAATGAATA ....:.......:..:..:--:......x..:....:...:.x:...:xx.:..--------...............x.....x..:x... 19M2I33M8D29M 62/81 76.5% 83/94230402 0.0% 10/81 12.3% 34387985 NA +4027 chr4 + 190214555 42783781 42783780 42783864 84 ATGTATGTATGTATGTATATATATATATATACACACACACACACGCACAGAGACACACACACACACACACACACATATATATGA chr4 - 94230402 8395788 8395787 8395871 85834532 85834531 85834615 84 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ....:.......:..:...x.:..:...x....:.:::.::.x::..:x:.x.................x.....x..:x..:. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 34387993 NA +3216 chr4 + 190214555 42817123 42817122 42817189 67 AAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAGAAAAGAAAGAATAAGAGAAAAAAGAAAAAAGA chr4 - 94230402 45628604 45628603 45628670 48601733 48601732 48601799 67 AAAAAAAGGGGGATGAGAAAAAAAATAGGAAAAAAAAAAGAAAGTATCTTAAATAAAGGGAAAAAGA .......:::::.x:.:........x.....:..:.........x..xxx.:.x...:.:....... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -2811481 -91418921 +3284 chr4 + 190214555 42817129 42817128 42817190 62 AAAAAAAAAAAAAAAAAAAGAGGAAGAAGAAAAGAAAGAATAAGAGAAAAAAGAAAAAAGAA chr4 - 94230402 9363477 9363476 9363538 84866865 84866864 84866926 62 AAAAACAAAACAAAAAACACAGAAAGAACAATGAGAAGAATATGAAAAAAAAGCAAAAGGAA .....x....x......x.x..:.....x..x:::.......x..:.......x....:... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 33453652 NA +3247 chr4 + 190214555 42825635 42825634 42825724 90 CCTTCCAGCAGGCCTTCAAGATAGT--ACTATTATAAGGTTTATTTTATAGTTGTGGAAACTGAGGCACAGAGAAACTAGCTACTTTGCCCA chr4 - 94230402 10729166 10729165 10729257 83501146 83501145 83501237 92 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ...:x..::.xx...x::..:...x--.:..:...x..x.::......:..x..x.:.............x.x.:::..:x..x........ 25M2I65M 61/90 67.8% 92/94230402 0.0% 2/90 2.2% 32096469 NA +3108 chr4 + 190214555 42830598 42830597 42830686 89 AGTTTGGGG---TAGTAGAAATACAAGAAACACATTTCATTACAGAGCTCAGAGGATTATGCATCTATTTCTTTGTATTACAGAATCAATTG chr4 - 94230402 24227776 24227775 24227867 70002536 70002535 70002627 92 AGTTTGAGGATATAATTCTGGTATAATAAAACTATATCATTACGGGAATCAGAGAAGTATGAAATCACTTATTTGTGTTACACAATCCATTG ......:..---..:.xxx::..:..x...xx:..x.......:.::x......:.x....x.x::.:..x.....:.....x....x.... 9M3I80M 61/89 68.5% 92/94230402 0.0% 3/89 3.4% 18602822 NA +3041 chr4 + 190214555 42859079 42859078 42859151 73 CTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAACTGTCCTACTATTTTTCAAAGTAGTTCTGACAACTT chr4 - 94230402 71871112 71871111 71871184 22359219 22359218 22359291 73 CTCTGTCTCAAAAAACAAACAAACAAAAAAAGTAAAATCATATTGTTTCTTTTCCAAAGACTTTTGATTACTT ...:...........x...x...x.......:x:...:::.x:.::.x:.....x..:x.x..:...:x.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -29012033 -65218369 +3680 chr4 + 190214555 42880581 42880580 42880663 83 CTGCAACCTCTGCCTCCTGGGTTCAAGAGATTCTCATGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGCATGCACTACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........x.x...x..x.x.....:..::...........:.:....--.:.....:..:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 24683455 NA +5612 chr4 + 190214555 42892394 42892393 42892554 161 ATGCATGGGTGATTTGGATATAATATTTATCAATGC--TGATTACCTGGATTGCTTTGGCTGATCTGGCTAGCCTGGAGGGTTTTTCCATTCTTCCCTTACTGTTGCATATGTTTTCTTTCTGAAACCTT-TTCTCTGTCAAAGAGAACAACATTTTCTACTAG chr4 - 94230402 69279864 69279863 69280026 24950377 24950376 24950539 163 ATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCC-TTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAG ...::x...:...:...x.:::.:..:.:...x:x.--....:...x..:...x................:..:x..x....x.:...-...:..:..:..:.:.x...:..:x.:.:.:.:...:.:x:-:x..:x...:.....:..:..x..::.::x... 36M2I50M1D41M1I33M 105/160 65.6% 163/94230402 0.0% 4/160 2.5% -26387470 -67842932 +27618 chr4 + 190214555 42892993 42892992 42893721 729 TGTTAAAGAGTCCACCATGGCTATTTAATATTTAAAGGCTGAGATCATTTTGCGGGTTTTAGTTTAAAGGTAACCATAGCACACACACACACATTTATTATTAATAGCAGAGACACACTGTAAGTCCTTGGGAATCTTCTTTCCTTTTGATGTTAGTTTCACAGGAGTGCTGCCATCACTAGAAT-TGGCTCTGATATTGCTATC-----TGGCAAGTGGACTAGTGCAGTAACAACGGGTCCAGAATGCTGTAAACTGTTCATATGGGTGGAGGTGACCATGCTTAAAAGGGAGATGAAGCCAGAAAGTGACAGGC---CACGGAAAGTCCGGTTTCGGATCGCGTCCTCTCACAGTGGGCGAGTTCTGAAGGAAGTGTATGAAGATGGGCAACCGTCAGGCTCTCTGGATTCTGAATGTGCCAGTATCTGTGGGATAGATG---------GACTAGGTGATTCCGATGGACAGCAGAATGGCCACATAGAGTCAGAAGGTGATGAGAATGAGAATGACCAGGATAGCTTGCTGGTGTTAGCAAGGGCTGCCAGTGAGAAGGGTTTTGGTACAAGAAGAGTCAACATTTTAAGCAAAAATGGCACAGTCAGAGGCGTCAAATACAAAGTGAGTGCTGGCCAGGCTCTATTTAACAATTTGACCAAAGTATTACAGGTAAGTCATTGCTGTTTCCTTCTCCTGCTCTTTGTTCCTAACTCACCATCTGAACACCTCTCAGTTCTCCA chr4 - 94230402 24242110 24242109 24242826 69987577 69987576 69988293 717 TGCTAAAAACTACACAATGGCTCTTTAATATTTAATTGACGATATCATTTTACAGGTTTTAGTTTAAAGGTAACCATAGCACAAACGCA----TTCATTATTAACTGCTGAATAGCAGCGTAGGTTCTTGGGAATCCTCCCT------------GGCTTAATATGAGAATCCTCATCAGAAGAAAACAGCACTGGTATTGTTGTTAAGCGTGACAAACTGGCAGACCTGATGGGCACCACCCTGGAACAATGCAAACTGCTTATATCAGTGGAAGAGACCATGTTCAAGGGTGAGGTGAAGGCGGAAAGTGAGAGGCTGTCAAGGAAAGTGCGGTTCCGTGTGGCGTCCTCACACAGCGGCCGGGTGCTGAAGGAGGTCTATGCTGACGGGGAGGCCACCGACTCACTGGACTCTGAATACACCAGCAGCTCGGAGACTGACCAGACCAGCCGGCTGAGCGAGGTGGAGGGACAGCAGAATGGGCACGGTGGCTCTGAGTGTGATGAAAATGAAAATGAGCAGGATGACTTACTCATTTTAGTCCGAGCCACGAAAGAGAAGGGTTTTGGTACAAAGCGAGTCAACATTCTCAGCAAAAATGGCACAGTCAGAGGTGTCAAGCACAAAGTCAGTGCTGGTCAAGCCCTCTTTGACAACTTGTCAAAAATATTTCAGGTAAGAGA-TGCAGTT-----------CAACTGGCTGCAAGCCCAGCATCTG--TCTCTTTCAGCTCTTCA ..:....:.x.x...x......x............xx.x:..x........:.:.............................x..:..----..:........:x..x..:xx:..x:...:..:..........:..::.------------:.:..x.:.x...x:::x:.....xx....x-::..x...:.....:.:.:-----..:...::x.:.x:::x:::.::xx..x:x:.::...::x..:......:.:....x:.....:.x.......:.:..::.x...:.....x.:........x....---..x.......x.....:..x:.x........x.....:..x..:..x........:..x....xx..:...x.:x.xx.x.:...x.....:.......:::....:.x..xx.:..:x..:x---------.:..::.:..xx:x..x..............x...:xx.:x..x..:x.......:.....:.....x......::...:..x:.x....:xx.:..::.x.:x...................::x...........:.x.......................:.....::.......x........:..:..:..x...:....:...x.x...:....x........xx.-...x...-----------.xx:.x.:.x.x.:.:..x......--:x:..:....:...:.. 89M4D49M12D31M1I19M5I107M3I123M9I232M1D7M11D25M2D17M 495/699 70.8% 717/94230402 0.0% 48/699 6.9% 18650883 NA +3313 chr4 + 190214555 42911230 42911229 42911378 149 CAATCTAATTTTAGGCCATTCCAAAGC------------AATTGAAGCATGAATATATTTTGAAAGAAGTTTACTAGGTTTCCAAATATGCCTCTAATACATATAATCAAAAAAGCAATAGCAACAAAAGTGTATAAAATCAAA--CAATAAATCAGTACTAA chr4 - 94230402 23132039 23132038 23132194 71098209 71098208 71098364 156 CAATTCAGTCTTA-----TTCCAAAGCTGCTGCTTTGGGAGTTGAGCAGTTAATA-GCTTTCAGGTGAGTTT-CTGGCCTTGCTGATAAAACTTTAAAACAAACAAATAGAAAAACAACAACAACAAAAATGTAAAATATCAAAGGCAATGGACAACCATTAA ....::.:.:...-----.........------------.:....:xx:.x....-::...x.::x:.....-..:.x:..x.x:...x:x..:...x...x.:..x:.:....:...:.:........:....x..x......--....::.:x.x:.:... 13M5D9M12I16M1D16M1D71M2I17M 96/142 67.6% 156/94230402 0.0% 21/142 14.8% 19779191 NA +3637 chr4 + 190214555 42915400 42915399 42915514 115 ATTTGGAATCAATTAGGGTGTGTAGGATTGTCTT-TAATGAAAAGATATTTTTCTCTTTCTCTCTTTTTTTTCCTCCTTTTTTAGTAGTTTTTAGTATCTCCACCCAGTCTGGAAC chr4 - 94230402 47469752 47469751 47469863 46760540 46760539 46760651 112 ATTCGGAGCTGCTTCGGAGGTGCGCGATTTTTGCGTTATATATATATATTTTTCTCTTTCTCTCTTTTTTTTCCCCCCCTTTC--TTATTTTTAG--CCCCCCCCCCGCTTGGCAC ...:...::::x..x..:x...::x....x.:x:-.x..:x.x.x.............................:..::...:--.x:.......--:.:..x...x.::...x.. 34M1I48M2D10M2D19M 77/111 69.4% 112/94230402 0.0% 5/111 4.5% -4554352 -89676050 +3425 chr4 + 190214555 42932576 42932575 42932642 67 CCATATATATATATATA------TATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398801 33398800 33398873 60831530 60831529 60831602 73 CCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .......x..:...x..------.:::.:.:.:....:.:.......:.:.............x.....x... 17M6I50M 52/67 77.6% 73/94230402 0.0% 6/67 9.0% 9533775 NA +3157 chr4 + 190214555 42932580 42932579 42932646 67 ATATATATATATATA----TATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x..:...x..----.:.:::.:.:.:....:.:.......x.x.............x.....x... 15M4I52M 51/67 76.1% 71/94230402 0.0% 4/67 6.0% 9533777 NA +15580 chr4 + 190214555 42962878 42962877 42963142 265 TGTTTTCCCTTCAGCAACCATCAACTGATCTAGAATTTGACCGTGTAGTGATTTATACCACCTGCCTTCGTGTGGTCCGGACAACCTTTGAAAGATGTGAACTGGTTAGAAAGATTTTCCAAAACCATCGCGTAAAATTTGAAGAGAAAAACATAGCCCTGAATGGTGAATATGGAAAAGAGTTAGACGAACGATGCCGACGAGTTTCTGAAGCTCCTTCCCTCCCTGTTGTGTTCATTGATGGCCATTACCTTGGGGTAAGTAA chr4 - 94230402 24268783 24268782 24269044 69961359 69961358 69961620 262 TGTTTTTTTTCCAGG---TGTCAACAGTGCCAGAATTCGGCCGCATAGTAATATATACCACTAGCCTTCGTGTGGTGAGAACCACTTTTGAAAGATGTGAACTGGTTAGAAAGATATTTCAAAACCACAGAGTTAAATTTGAAGAAAAAAATATTGCTCTGAACAGCGATTATGGAAAAGAACTTGATGAGAGATGCAGGAGGGTGTGTGAAGCCCCATCCCTCCCTGTTGTGTTTATTGATGGCCATTATCTTGGGGTAAGTAA ......:::.:...x---::.....x.xx.:......:.:...::....:..x........:x.............xx.:..x..:.............................x..:........:x.x..x...........:.....:..x..:.....::.:..x...........::.x..:..:x.....x.:x.:..x.x......:..x.................:..............:.............. 15M3D247M 208/262 79.4% 262/94230402 0.0% 3/262 1.1% 18694095 NA +4151 chr4 + 190214555 42987201 42987200 42987308 108 CATATATATAT---TATATATATATTATATAT---------------TATATATATATAATA---------------------------------------------TATAATATATA-TATATAATATATATATA-TATATAGAGA----------GAGAGAGAGAGAGAGAGAAAGAGAGA chr4 - 94230402 89611859 89611858 89612041 4618362 4618361 4618544 183 catatatatatatgtatatatgtattgtatatgtaatctaacacatatatatatatataATAGAATACGAAGCATAGATAAATCCTTATCTATCTCCGTATTATTAGTACAACATATAATATATAATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGA ...........---.......:....:.....---------------...............---------------------------------------------..:..:.....-............x....-..........----------.:x..............:........ 11M3I18M15I15M45I11M1I17M1I10M10I26M 100/108 92.6% 183/94230402 0.0% 75/108 69.4% -46624658 -47605744 +4486 chr4 + 190214555 42987212 42987211 42987306 95 TATATATATATTATATATTATATATATATAATATATAATATATATATATAATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAAAGAGA chr4 - 94230402 89611949 89611948 89612041 4618362 4618361 4618454 93 TATCTCCGTATTAT-TAGTACA-ACATATAATATATAATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGA ...x.x::......-..x..:.-.:..................x....:x.....x.x......::.x..:x..............::.:..... 14M1D7M1D72M 73/93 78.5% 93/94230402 0.0% 2/93 2.2% -46624737 -47605665 +3187 chr4 + 190214555 42987256 42987255 42987320 65 TATATAATATATATATATAT--ATAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGTCTTGCTCTGT chr4 - 94230402 46959253 46959252 46959319 47271084 47271083 47271150 67 TGCACAATCTACAAATATATTAAAAAAACAAGAGAGAGAGAGAGAGAAGGAGAAAATATTGTTCTGT .::.:...x..:.x......--.x.:.:x:..................:....:.:.x...:..... 20M2I45M 49/65 75.4% 67/94230402 0.0% 2/65 3.1% -3971997 -90258405 +3696 chr4 + 190214555 42991405 42991404 42991490 86 AAATTTTATTTTTTATTATACATATATATCTA-----TATATACCTCTTGCTCTCTCTCTACACACACACATACATATATATATATATATA chr4 - 94230402 44548642 44548641 44548726 49681677 49681676 49681761 85 AAACCCTATTTTTT------CAAATATATCTAATCACTGTGTAAATCTCTCTCTCTCTATACAGACACACACACGCATATATATTTATATA ...:::........------..x.........-----.:.:..xx...:x........x....x.......:..::........x...... 14M6D12M5I54M 64/80 80.0% 85/94230402 0.0% 11/80 13.8% -1557237 -92673165 +6969 chr4 + 190214555 43020337 43020336 43020514 178 CTCTCTCTCGTTAATAGGGTGCTGAGAAAATTTTGTCAATGAATGAATCAGGAGAACTGCAAGACATCCTAACCAAAATTGAGGTAAATGTGCTTTCAGCAACTTAGTTTTAGTAATCAAAATATTAAACACATTCTGATTATAATTGAG-----TTTTCCTAATTGAATTCTCTCTCCCCAT chr4 - 94230402 24276119 24276118 24276291 69954112 69954111 69954284 173 CTTCTTCTTACTAATAGGGTGCTGAGAAAATTTTACTAATGAATGAATCTGGGGAACTGCAGGATCTCTTAACCAAAATTGAGGTAATTGTA-TTTCTGCAA-TTAATCATAGGGAAC--------ATACACGGAATGTTTACAATTGAAAATGTTTTTCTCAACTGTATACTTTTCTTCTGT ..:::...:::.......................:::............x..:........:..:x..:..................x...:-....x....-...:.:x...x:.x.--------.x....:xxx..x...:......:-----.....::..:..x..x..:.::::.::. 92M1D9M1D15M8D24M5I28M 124/168 73.8% 173/94230402 0.0% 15/168 8.9% 18744218 NA +14482 chr4 + 190214555 43030326 43030325 43030643 318 TCTGTTTTCTCTTGTTCCCCTGCCACCTTATACAGAGAGTACAGCATCCACATGAGTGTCCCTCTTGTGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCCATGGGAGCAAGATGTCCATGTTTCGAAACTGCTTCACAGACTCTTTCAAAGCCCTGAAGTGTACGGCTTGCAATGAAAATGGTCTTCAGCGTTGTAAGAACTGTGCTGGTTAATTGGAGCTTCTACCCAGGAAAAACCTCATTTTATTAATCAAAGGCAATACTTTGGTTTAT-ATATATATTTTTAAATGGTTA---TGTTTATGGA--TTAATCAATAAA chr4 - 94230402 24278155 24278154 24278466 69951937 69951936 69952248 312 TTTGATCTTTCTTACTTTCTT----CCTTGAGCAGAAAGTCCAGCATCCTCATGAGTGCCCTTCATGTGGGGGTTTCGGTTTCCTTCCGTGCTCAGTGTGCCATGGGAGCAAGATGTCTGTGTTTCGAAACTGCTTTACGGACTCATTCAAAGCCCTCAAGTGCACAGCTTGCAATGAGAATGGGCTACAGCGCTGCAGAAGCTGTGCAAGTTAAAAAGGGTATCTCCACATATGCAACTCCATTTTATT--------GTACTGCAGCAGTTTGTAATATGATTTTTTAAAAAATTAATCTGTTTATCTAATTCAGTCAATAAA .:..x.:.:....::.::.:.----....:x:....:...x........x........:..:..x.....:..:..:..:..:.....:.....x.......................::................:..:.....x...........x.....:..:...........:.....x..x.....:..:.::.:......x:.....xx:.:.:x...x.x..x:x:x...::.........--------.:.x.:.xx::....:.-....:xx........x::...---.......xx.--.:.:........ 21M4D225M8D17M1I21M3I10M2I12M 230/306 75.2% 312/94230402 0.0% 18/306 5.9% 18752171 NA +12428 chr4 + 190214555 43050536 43050535 43051026 491 CTTTACTAAAACATTAAAAATGCATATTA---TTGCTGATATCTGCTTCATCAGTTTCATAAGAACAAAAACAATAACTGTCACTTCATGTATTATTTCTAGCCATTGCTTTCGTATTATTGCATTAAAGCTAATTTTAT-----TCACTTAGACCAAAACATAAAACGTGACCACAAAAGCATTCAACAGGAAACATTTATGACCTAAATAATTCAGGCAGCGGAAGAATTTAGATTGCTTAGTTTCCTTTAAATAATTTAGGGGTGGCACTTAAGGGCACTGAATAATCAATCCACCCATGAATTGAGTAGCA-AAATGGTGGTGTATAATTTTTGATATTTAAATCTTAGAGGTCTTTTGTCT--------TTTATTCCAGAATAATGAATCTGAAAAAGAATTGTTTTAAAAGGAATGGGTTATGTGTAG--------AATTTTAAAATATCAGCTCTTAGCAACTCATCAGTGCCACTTGGACCGAGTCCTCTGCAAGGAGCCAAAAGATT chr4 - 94230402 24282175 24282174 24282675 69947728 69947727 69948228 501 CTTTATT----CATGAAAACAGGAAATTAATTTTACTGAGCTGAGTTTTACAATTTTTATGAGAATATTTATAATGGTGGACTCTTTGGTTACTTTTCCTAGCTACTGCCTTTGTATT---GCATTACATTTAATTTCATATATTTCACTTACCCTTAGATACATTATTTGACCACAAAAGCATTTGACAGGAAACATCTATGCCCTAAATAATTTAGGAAGGAGAAGAATTTAGACTGCATAGCTTACTTTAAATAATTTAGTGATTATAGTAATGGTCATTG------TAAGCCAACAATGATTTGAAAAGTAGAAGTTATTAGAAATAAATTGTTATATTT-AATCCTATTTTTCTTCCTTCTTGAGTTAATTTGCTAAGGGGTGATGAATCAG-GAAATAATTGCATTAGAAGGAAAGAGCTGTAAAAAGAAAAAAACAACCTTGCAGCTTAAGCTTCTTCTAGCTTATCTACTCTGCTCTGAAAAATTGCTTTAGAATGAGCTCAAAGATT .....:.----...x....xx.x.x....---..:....xx.xx.:..:.:x.x...:..:....:.xxx.:...:::x.x.x...::xx..:.x..:.....:.:...:..:.....---......x.x:......:..-----.......xx.:x.:.:.:.xx.:x................::...........:....x...........:...x..x:............:...x...:..x...............x.:.x::.x.x.x..x..:..------:..x...x.x....x....:x..:.-..:.x:.x:x:x....x..x.x......-....:..xxxx....::x...--------...::.xx:.::.:.......x.-:...x.....:x...:......x.:.:.:.:x:x..--------..::..:x.::x.x....::.xx:.:..:...x::x.::..:x..xx:.x.x..:.:x..x....:x....... 7M4D18M3I86M3D19M5I139M6D25M1I28M1D21M8I23M1D36M8I74M 316/476 66.4% 501/94230402 0.0% 40/476 8.4% 18768361 NA +3277 chr4 + 190214555 43086621 43086620 43086702 82 ACACACATAGATATAGGTATG----TGTGTATACATATATATATGTATGTGTGTATATATATTATATAATTTTTCATATATGTATG chr4 - 94230402 1888773 1888772 1888858 92341545 92341544 92341630 86 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATAGGCCTG .:.:.....x:..:..xx:..----......:.:.....:.....x..x...........x..::...:x.x....x...x.:x.. 21M4I61M 59/82 72.0% 86/94230402 0.0% 4/82 4.9% 41197848 NA +3277 chr4 + 190214555 43086621 43086620 43086702 82 ACACACATAGATATAGGTATG----TGTGTATACATATATATATGTATGTGTGTATATATATTATATAATTTTTCATATATGTATG chr4 - 94230402 1885632 1885631 1885717 92344686 92344685 92344771 86 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATAGGCCTG .:.:.....x:..:..xx:..----......:.:.....:.....x..x...........x..::...:x.x....x...x.:x.. 21M4I61M 59/82 72.0% 86/94230402 0.0% 4/82 4.9% 41200989 NA +3499 chr4 + 190214555 43101654 43101653 43101760 107 TATATAGTTATATATATGTTTATATATAGTTATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 51537718 51537717 51537819 42692584 42692583 42692685 102 TGTAGAGTTGCACAAATA-----ACATAATTAAACATATAGATGTATGTATTTCTGTGTCCGTTTATATATATTTCAGTATAAATTTATTTCTGTAGATGGGTATAT .:..x....::.:.x..:-----.:...:...x.:....:x..........x.x.....x:..x.........x.xx:....x..x...x.x.:..x..:x:..... 18M5D84M 71/102 69.6% 102/94230402 0.0% 5/102 4.9% -8436064 -85794338 +3405 chr4 + 190214555 43101663 43101662 43101762 100 ATATATATGTTTATATATAG-TTATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 33398780 33398779 33398880 60831523 60831522 60831623 101 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .....:.:::x.::::.:..-::.....x......x..x:x:....:...........:.:.......:.:.x.x.x.x.x.x.:.x.x...x....:... 20M1I80M 66/100 66.0% 101/94230402 0.0% 1/100 1.0% 9702883 NA +3038 chr4 + 190214555 43101684 43101683 43101742 59 TATATATATGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959570 32959569 32959628 61270775 61270774 61270833 59 TGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:..:x...::...x:...x.....::...:.......:.......:.x......x:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 10142114 NA +12423 chr4 + 190214555 43103048 43103047 43103310 263 CATGTTAAATAACGAATAGTGTAATGCAAACTGTGCTACTATAATTCCCATTGAAACTCCATTAAGCAAAGAAAAGCTGTCATGTATAAAATCTGCTGATCCTTAGGGATGACTTGGAGGACATTTTTCCTTTAATGGCTTCATGCTTTGCCAAGCCATAATTCACTTATATTTCTGTCAACAGCTTCATCACTATGTGTGTTTGACTTTCCTGAAAATGAC---ATTATGACAACTCTCCTTACTATGCAAAGTTATTGCCTTGA chr4 - 94230402 24290491 24290490 24290752 69939651 69939650 69939912 262 CACATGAGATAAAAAACATGATAAGGCAAACTGTACTCCTGTAATTCCCACTGAAACATCACTACATAAAGAAAAGCTGCCAGATATAAAACCCACTGATCCTTAGAGATGACTTGGAGGACATTTTGCTTCTGATAGCTTCATCCCTTGCCAGGCTGTTATTCACTTACATTTCTGTCAGCA---TCCTCAATGTATGACTATGATTTCCATGAAAATTACCATACTATAA-AAATTTCTTTTCAATGTAATTTTAATTGCTTGA ..::.x.:....x:..:.xx:...x.........:..x..:.........:......x:..:..x::............:..x:.......:.::...........:....................x.:.:.:..:.......x.:......:..::.x.........:..........:..---..x...x.:.:..xx.x...:..:.x.......x..---.:...:.-..x.:..:..x.x...:..xx...x.xx..... 183M3D36M3I7M1D33M 194/259 74.9% 262/94230402 0.0% 7/259 2.7% 18812557 NA +3153 chr4 + 190214555 43108160 43108159 43108218 59 ATGTGCATATATGTGTGTGTGTGTGTATATATATATATACATATATACATACATACACA chr4 - 94230402 24136193 24136192 24136251 70094152 70094151 70094210 59 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACA ............:.x.:..x:xx...x......:.........:.x...x...x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 18971967 NA +3222 chr4 + 190214555 43108176 43108175 43108369 194 GTGTGTGTGTATATATATATATACATATATACATACATACACATTTTACTGTTT----TACTGCATGTAATTC--------GTGGAGCCATGTAA---AATTTATTGATTAAGGTGAGGCA---------------TAAATAAAATAACCAA------GTGCTAATTTATTTGGTATTTACTAAATAACTGTATATGCATAGCTTAGTTCCAGGGGAAAAATGCCTGCAA chr4 - 94230402 26483686 26483685 26483915 67746488 67746487 67746717 230 GTATGTGTGTCTCTATGCATACAGATGCATACATACAGACACATTTTAATGCTTAGAACAACGCAACTGATCACTTTCCAGGCAGGAACATGTGACTCCTTTTCTTGCTGCGTGTCACACAGCCAAGCAGTGACTCTAGACAGGCTTCCTAATATGAGGTGTGGGTTTATTTATCTTTTAACAAGTGACTACATTTAGAAAACATTTTTGCAATAGAAAAATGCCTGCAA ..:.......x.x...::...:.x..::.........x..........x..:..----:.x:...xx.:..:x--------.::.::x.....:.---xx...x...x.xx:x..x.x:..---------------..:.:.::x.xx.:..------...:x::.......:x:x....x:..:.:...::..x.:x.x.:.x.xx..x..:x:............... 54M4I15M8I14M3I23M15I16M6I72M 123/194 63.4% 230/94230402 0.0% 36/194 18.6% 16624490 NA +3086 chr4 + 190214555 43109245 43109244 43109327 83 CTGCAACCTCCACCTCCCAGGTTCAAGCGACTCTCATGCCTCAGCACCCCGAGTAGCTGGGATTACGGGTG------TGCGCATCAACC chr4 - 94230402 18197126 18197125 18197214 76033189 76033188 76033277 89 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCC ..:..:..:xx.x..:.::........:.x:..x..x.x......x:::.:.........:.:...:x...------..:.:....x.. 71M6I12M 56/83 67.5% 89/94230402 0.0% 6/83 7.2% 24912119 NA +3324 chr4 + 190214555 43118552 43118551 43118601 50 TCTCAAAACAAAAAAGAAAACAAGCAAACAAAAACAACAACAAAAAATAC chr4 - 94230402 4027213 4027212 4027262 90203141 90203140 90203190 50 TCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAC ...:..x........:....x..x.......x...............x.. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 39091339 NA +3532 chr4 + 190214555 43118562 43118561 43118648 87 AAAAAGAAAACAAGCAAACAAAAACAACAACAAAAAATACTGGATATAGAAGGAACTTACCTC--AACATAATGAAAGCCATATTCAAC chr4 - 94230402 18021892 18021891 18021977 76208426 76208425 76208511 86 AAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTCATCTCTTTAAATAATGA---CCATCTTTAAC ......:......:.......x...............x.x::.:x.x....::xx..:.:...--x.x.......---....x..:... 63M2I10M3D11M 64/84 76.2% 86/94230402 0.0% 5/84 6.0% 25096670 NA +3401 chr4 + 190214555 43132759 43132758 43132826 68 AAAAAAAAAAAAAGGAAAAAGAAAGTCTCGCCCTCAGTTTTCCTGAATTTCTCTCAAGTTCTATATGA chr4 - 94230402 1522675 1522674 1522742 92707661 92707660 92707728 68 AAAAAAAAAAAAAGGGAAAAAAACCTCCCTCCCTCGGCCTCCCTGGGTGCCCCTCCAGCCCCATAGGA ...............:....:..xx..:.x.....:.::.:....::.x:.:...x..::.:...x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 41610084 NA +3430 chr4 + 190214555 43147385 43147384 43147467 83 TTCTTTCTTTTTTTTTTTAATTTCTCTCCTTCT-TTTTTCCTTTTCTCATCCTCATCCTCCCTCTCTTTTTCCTGCTCTTTCTT chr4 - 94230402 18412884 18412883 18412967 75817436 75817435 75817519 84 TCCTTGCCCTCCTTTTCTGACATTTTTATTGCTATTTCTCATTTTATCCTCCTCATTCTTCCTGTCTTTTTCTTGTTGTTTCTT .:...x.::.::....:.:.:x.:.:.x:.x..-...:..x....x..x.......:..:...x........:..:.x...... 33M1I50M 58/83 69.9% 84/94230402 0.0% 1/83 1.2% 24734501 NA +14231 chr4 + 190214555 43162314 43162313 43162829 516 AATGATGGTCATTCAAATAAGTCACAATTA---------TTTTATTTTCATACATATCACAATTTTATGTGACATACTTAAATATATTTTCATATTTTTATTAAATTCTCAATTTTTGTATTT---TTACTTCCACTTTTTGTAGTGTACATTCTACACTTAATTTGAGCATCATCAAAGACAACTGCCACCCAGAGCATT-----ATGTCTTGAAACATAACTCATGTTGTATTCAATATTGTTGATAAATGAAAGTTACTTATCAGCATTTACCATATAGAGAAATGTGAAATTGAATGGTGTAATTTTTCAAAAGCAATTAGTTGTCTAAGTTGAAGACAAAGTATTAGGTATAAAATATTT---TAATCAAACAAAAAAT-TAAATATTATGTATTTAAATGTTTAAACATGATACTTTCAAGCTAAAACTACCTTGCAACATGTTGATGAATGTCACTGTGTTTCCTCTGGGTAAACAGAGGAAGTTTGCTATGACAGTGACAGCCACAGGTCTTA--AATAATTGCCTTGGAA chr4 - 94230402 24310987 24310986 24311482 69918921 69918920 69919416 496 AACGATGGT-ATTCAAGAACGTCTGAATTAATTTGAATGTGTTATTTTCATCTTCACT--------------CAGGATTAAATATTTTACTTGGTTTCTGTTAATTC-------TTTGTATTTGGTTTGTATTCAGCTTTTGG----------------TTCATTTGTGCACCACTAAATAGTTCTACTGCACA-ATTATTTTTATATGCCTTGAAATATAATTAATGTAAAGCTGAATATCATTGATAAATGGAGGCTACTTATCAGTATTTAGCATATAGGGAAACGCAAAAGGGAATAATGTAATTTGTCTGAAGCAATTAGTTGTCTAAATTAGAGATAAAGGATTAAGGATGAGACATTTAAAGAACCAAACAGTGAATAAAAATATTGAATGTTCAAAAGTACAGACATAACACTTTCAAGTTGGAAGTGCCTTGTAAAA---TGATGGATGTCTTTATGCTTTCTATGGACAAACACAGAGTGCACAGTACTA-AATGATGCCTATGTGTGATATGCATAATTGCCTTGGAA ..:......-......:x.x...xx.....---------.x..........x:x:.::--------------..x:x........x..x::xx:...:.:....x.:-------.........---..::x.:..x:.....x----------------..x.....x...:..::...x.xxx..:.::.x..-.x:...-----...:.......:....:.x....x:x::.x.....::..........:.:.:..........:.....x.......:....:.::...xx....::........x..x:..................:..::...:....x....:.x..:.:.:....---x..:......:x:...-x.......:x:.:..:...x..x:.:....:.:.........:.::..x.:.....:..x.---.....:.....x:.:..:..:..x...::.....x..::x.:x::x..:x.-.:...::x.:.::x..xx..--x............... 9M1D20M9I19M14D35M7D9M3I17M16D35M1D6M5I159M3I16M1I61M3D51M1D20M2I16M 331/473 70.0% 496/94230402 0.0% 66/473 14.0% 18851327 NA +3016 chr4 + 190214555 43174102 43174101 43174185 84 AGAGAAGAAGGAAGAAGAGGGGAGGAAGAGAAAGAAAAAAGAAGGCAAGAAAGAAGAAACAAAGGAAAAAAAAGGAAAAAAATT chr4 - 94230402 7739259 7739258 7739341 86491062 86491061 86491144 83 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAG-GGGAATTTTGAAAAAAAAAAAAAAAAAATT ....:::..::x...:.:....:....:.:...::...:....::::x:::..-:.:..:xxx.:........::......... 53M1D30M 52/83 62.7% 83/94230402 0.0% 1/83 1.2% 35434843 NA +12410 chr4 + 190214555 43180740 43180739 43181093 354 TTTCAAAATTCTTGAGCATCCCCTTGGCCTCTTTCTCTACACCCCTTCCCTGTTGAGAATGAAAATGTGGATATAC-CTCATTGAATGTCTGAGCATATTCTTGTTTATACTGATGCACAAGTCCCCAAGGTCTGTCTCTAACATTGTCCTGCAAACAACACATCCTTAGCAGAGGCGTAGCCTGACTCCCTGCTGTAATCAACCCTCCAGAGAAATTTAATTTTTAATTAAAGGAAGCAGAGTGTTTACTTTTGCTCTAGAGATGATTAATCAGAACTTTGTTATTTGTGTTGCAAAAAAGGGATAAATTAACTATACCTTTAATTAGACCAGAGGGAATTTACTTTCACTGTC chr4 - 94230402 24312941 24312940 24313292 69917111 69917110 69917462 352 TCTCCATGTTCTTCCAACTACCCTTGTTTTTTCTATATCCACCTCTTTC---TAGAAAATGAACACGTTTTATTATTCTAATTGAATATCTGAAGAAATTCCTGTTCTTATTCACACTGAGTTCCTAATAGTCTACCTCGAGTTGTGTCCTCAAAGAAACACCTATTTAACAAGAGCATGTAGCAGCTTTCTATTGTAATGATCCCTCAAGAGGAATTTAACTTTTAATTAAGTGAAGCAGAGTATTTACTTTTCCTATATAGCTGATTAATCAGGGCTTTGTTAGTTATATAGAGGAAAGAGACTAAATTAAATACACCTTTAATGAGTTGACAGGGAATTGACCTCTGCTGTC .:..x.x:.....xx:xx.x......x::.:.:.x.x.x....:...:.---.x..:......x.:..xxxxx..:-..x.......:.....:x.x....:....:x..:.x.::.xx.:x...:x.x:....::...x.::xx......xx..:x.....x.x:...:..:::..:.:xxx:::..::..::......x.x.....x....:.......:..........:x..........:.........x..x..x..x...........::........x..:.:.x.x::...::.:x........x..:.........x..x:x.x........x..:.:::..... 49M3D24M1I278M 234/351 66.7% 352/94230402 0.0% 4/351 1.1% 18867799 NA +3218 chr4 + 190214555 43184785 43184784 43184881 97 TTTTTTAAAATAGAAAATAATTTTGGAATTTGTTTTAGGACAGAATTCATTTGTAGAGAATGAAATAAAAGAACCAGGAAAAGCTGCGACATAACTG chr4 - 94230402 34165282 34165281 34165368 60065035 60065034 60065121 87 TTTTTTAAAGTAGGAAACAATTTTTGAATTTCTTT----ACAGATGTTCTTTATATAAAAAG-ATTAAAACAA-----AAAAGTTGCAAAATAAATG .........:...:...:......x......x...----.....xx.:x...:..x.:..x.-.x.....x..-----.....:...:.x....x.. 35M4D23M1D10M5D19M 68/87 78.2% 87/94230402 0.0% 10/87 11.5% 9019503 NA +8882 chr4 + 190214555 43218189 43218188 43218486 298 CATACCAAATTAAGG--TGTTAAAATACCTTTGTTTGGCCTGGATAAATAGCTTATGATTTGCAAAAGAGAGATGATATGTTCATTCTGGTTTATAAAAAGCCATTTTAGAAATACAAATTGGATATGGGCCT------TGAGAGTTGTGAGACTTTCTAACTCATAAAATAAACACAGCTAGTTTCCATAT-----ATTTAAA---AGAT-CCAGTCTACAGTGCCTTAAGTCTAGAATCTAAAGGGAGAAAAATCATTTCCTCTAATGTA--TATTTAATAAACAAAACTGTCTACACAGAATTTCTAATAGAAA chr4 - 94230402 24327553 24327552 24327867 69902536 69902535 69902850 315 CACACTGAATTTAGGATCTTTAAAGTAACTTC--TCAGTGTATAAAGAAGACTTCTAATGGGTTTCAAAGGGATACTGAGTTTATTTTATTTTGAAAAAAGACACTTCAGAAATAGAAGTAAGTTATGAACATGTCATCTGAAAATTACAGGGCTTTCTTGCTCATAAAACAAAGAAGCATTTTTTCCATGCCCTGAATTTAAAGTAAGACATCTGTCTATAGTGCCTTGAGTCCAGACTGTGAATAAAAGAAGATAATTTCCCTCAGTGAAAATATTTAATAAACAAAACTGTATAAACAGAATTGCTAATGGAGA ..:..::....x...--:x.....:..x...:--.::.:x.:x.x.:.x::...x.:..xx.:xxx.:..:...:x.:x...:...:.:x...:x......x..:..:.......x..:.x:.x....::.x.------...:.:..::::.:......x:.........:...x.x:xx.xx.......::-----.......---...:-:.x.....:........:....:...x.x.:..x::.::..:..x......:::.:..x.--....................x..x........x.....:..:. 15M2I15M2D99M6I53M5I7M3I4M1I60M2I43M 200/296 67.6% 315/94230402 0.0% 21/296 7.1% 18890636 NA +3131 chr4 + 190214555 43241968 43241967 43242018 51 TTGGCAACACAGGGAGAGAGACCCTGTTCCAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 36313570 36313569 36313620 57916783 57916782 57916833 51 TTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAA ......:..:...:....x:x.:..:..:x.........:........... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 6928398 NA +3054 chr4 + 190214555 43270488 43270487 43270550 63 TGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTCTACAGATCCAATATTTGTT chr4 - 94230402 27486725 27486724 27486787 66743616 66743615 66743678 63 TGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAAAGCACCTATCTGTT ...................x..x...x....:x:...:.x.:.:..:.:.x.xxx...:.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 15783763 NA +3138 chr4 + 190214555 43297288 43297287 43297381 94 TTTTAAGAAATATTTCATTGATCGGTTTCTTGCGTAATAGATCATGGAGAATTGGTGAAAAAAAAATAGAAGAATCTTGAAGCACATGTTGAGA chr4 - 94230402 62897919 62897918 62898012 31332391 31332390 31332484 94 TTTTAAGGAATATTTTATTGATTGGTTTATCTTGAAGTATGTTTTAAACAATAATTAAAAAAGTAAAAAAAAAAACCCACCACACATACTTAGA .......:.......:......:.....x.:x:.x.:..x:.:x.::.x...x:x.:.....:x..x.:..:..x.:::xx:.....::.x... 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% -19600631 -74629771 +3049 chr4 + 190214555 43328865 43328864 43328921 57 CACTT--GGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 - 94230402 60463234 60463233 60463292 33767111 33767110 33767169 59 CACTTTAGAGAGTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGTCT .....--.:.....:x...:..xx..........x.............:.:x..:.... 5M2I52M 46/57 80.7% 59/94230402 0.0% 2/57 3.5% -17134369 -77096033 +3636 chr4 + 190214555 43343463 43343462 43343593 131 TTCATTCCTCCCTCCCTCCTTCCATCCATGCCTTCTTCTTTCCTTCCTTCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTC--TTTTTTTCCTTTTTCTTTCTTTCTC--------TCTCCTTTCC chr4 - 94230402 86872021 86872020 86872159 7358244 7358243 7358382 139 TCTATTCATTTCCTTCCTCTTCTGTC--TGCATTCTAATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCCCCATCTCAGCCATGGTCTCCTTTTC .::....x.::.:::.::....::..--...x....xx..::xx.......:xxx.:.::...x..::.::...:.....:.....x:...:....--x.:::...::......::.:x....--------........:. 26M2D68M2I25M8I10M 82/129 63.6% 139/94230402 0.0% 12/129 9.3% -43528558 -50701844 +4537 chr4 + 190214555 43343467 43343466 43343646 180 TTCCTCCCTCCCTCCTTCCATCCATGCCTTCTTCTTTCCTTCCTTCCCTTTTTCCTTCCCTTCCTTCCTCCCTT---CTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTTTCTCTCTTTCTCTTCTTCCTTCCCTCCCTCCTTCCTTCCTTC chr4 - 94230402 59424944 59424943 59425121 34805282 34805281 34805459 178 TTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTT-TCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTT----TTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTC ..:::.:..x...:.....x..xx.x:..::..::..:xx:x....xx...::..x.x::..x........:..---..x...:.x.x....-......:x.x....x..x...x.x.:.:x.::..:x.x...----....:..:...:...x....:.::.x.....xx.:::::...... 74M3I15M1D41M4D45M 111/175 63.4% 178/94230402 0.0% 8/175 4.6% -16081477 -78148925 +4358 chr4 + 190214555 43343477 43343476 43343739 263 CCTCCTTC-CATCCATGCCTTCTTCTTTCCTTCCTTCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTT--TCTCTCTTTCTCTTCTTCCTTCCCTCCCTCCTTCCTTC---------CTTCCCTCCCTCCTTCCTTCCT--------------TCCCTCC-CTCCTTC--------CTTCCTTCCCT---CCCTCCTTCCTTCCTTTTTCCTTCCTCCCTCCCTCCCTTTTTTCTTTCCT chr4 - 94230402 52740977 52740976 52741275 41489128 41489127 41489426 299 CCTCCTCCTCTTCCCTGCAATTTCACCCCCTTTCATCCGTGTTTCTTTTTACCTCCCCAGCCCTTCCCTTCCTACTAGGTTTCCATATGTCCCTATT--TTGTATCTTGCTCCTTCCCGTGTCTCCTGTCATTTTTCTAAGGCGTTTGGCTTCCCTGCCTCCTTCTTTCCCAGAGGTGCTTTTCTTCTCAATCCCCTCCTGTAACTCTTGACAGTCCATCCAATCCTTCCCCGGGCACTTCATGCCCTGAGCTCATTTGTCTTCTCATTCCTCTCCTCCCTCTCTCGCTCAATTCTTGTCT ......:.-.x...x...xx.:.:x:::....:.x...x.x....:..::x:::.::.xx......::.:.:.x:.xxx.:..:x.x.x...:.x..--..x.x...:x......:..x.x..:.:.x.--.:.:...xxxx.x.:.xx.......x........:...---------...::..:.::xx.:..:....--------------...x...-x......--------....x.x....---.:.x::.x:....::x..:.::.........:...x..:xx.....x:.. 8M1I88M2D30M2I38M9I22M14I7M1I7M8I11M3I50M 165/261 63.2% 299/94230402 0.0% 40/261 15.3% -9397500 -84832902 +3249 chr4 + 190214555 43343492 43343491 43343570 79 GCCTTCTTCTTTCCTTCCTTCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTTCCTTT chr4 - 94230402 8439366 8439365 8439444 85790959 85790958 85791037 79 GCCATCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTT ...x......xxx:...:::..x.x..::x...:.::::.x..:....:.::..:.........:.:....:...:... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 34904126 NA +3132 chr4 + 190214555 43343494 43343493 43343579 86 CTTCTTCTTTCCTTCC----TTCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTT chr4 - 94230402 8439371 8439370 8439460 85790943 85790942 85791032 90 CTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTT .....xxx..:..:..----...:x..:.:....:x.::..:...:.:...:....:.....:.....::....xx:..xx.::.:.... 16M4I70M 57/86 66.3% 90/94230402 0.0% 4/86 4.7% 34904123 NA +3018 chr4 + 190214555 43343511 43343510 43343588 78 TCCCTTTTTCCTTCCCTTCCTTCCTCCCTTCTTTCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCC chr4 - 94230402 28727284 28727283 28727361 65503042 65503041 65503119 78 TCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCTTCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTC ....:..x:..:.:.:.x....::....x.x:..x:.:..:.:::x..:x:...x:.........:....:....::. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 14616227 NA +3178 chr4 + 190214555 43343544 43343543 43343604 61 TCCTTTTTCTTTCTCTTTTTTTCCTTTTTCTTTCTTTCTCTCTCCTTTCCTTTTCCCTTTT chr4 - 94230402 23728340 23728339 23728400 70502003 70502002 70502063 61 TTTTTTGTCTGTGTGGCTTTTCCCTTTCTTTTTTTTCCTCTTTCATTTCCTTTTCCCCTTT .::...x...x.x.xx:....:.....:.:...:..:....:..x............:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 19615204 NA +3718 chr4 + 190214555 43343563 43343562 43343723 161 TTTCCTTTTTCTTTCTTTC----TCTCTCCTTTCCT-TTTCCCTTTTTCTCTCTTTCTCTTCTTCCTTCCCTCC---CTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTC-------CTTCCTTCCTTTTTCCTTCCTCCCTCCCT chr4 - 94230402 61964741 61964740 61964916 32265487 32265486 32265662 176 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCT .:..........:.x....----:xx..x..xx...-....:..x..x:.:..:....:::..:...::....:---...:..:.........x::x.x.x.x.x...:::::.:..xxx..:..::...:x.x::....-------..:.::...x.x:...:.x.x:..:.... 19M4I13M1I37M3I63M7I29M 101/161 62.7% 176/94230402 0.0% 15/161 9.3% -18621178 -75609224 +3120 chr4 + 190214555 43343683 43343682 43343742 60 CTTCCCTCCCTCCTTCCTTCCTTTTTCCTTC-CTCCCTCCCTCCCTTTTTTCTTTCCTTTT chr4 - 94230402 31754629 31754628 31754689 62475714 62475713 62475774 61 CTTTCCCCACCCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTTT ...:..:.x.:....:x..:..:.:..:...-...x:....:...:.....:......... 31M1I29M 45/60 75.0% 61/94230402 0.0% 1/60 1.7% 11589054 NA +3363 chr4 + 190214555 43343694 43343693 43343760 67 CCTTCCTTCCTTTTTCCTTCCTCCCTCCCTCCCTTTTTTCTTTCCTTTTTCTTTTTTCTTTCTCTTT chr4 - 94230402 42501716 42501715 42501780 51728623 51728622 51728687 65 CTTTTTGTCCTTTTCCCTGCCTCC--CCACCCCCTTTTTTTTTCCCTTTTCTTTTTAATTTTTCTCT .:..::x.......:...x.....--..x:...:.....:.....:..........xx...:...:. 24M2D41M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 841978 NA +3092 chr4 + 190214555 43343745 43343744 43343804 60 TTTTTTCTTTCTCTTTTTCTTCTTTTTCTTTCTTTCTTTCTCTCTCTCCTCTTTTTCTTT chr4 - 94230402 50985358 50985357 50985417 43244986 43244985 43245045 60 TTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTTCTCTTTATTCTTTTTTTCCCT ..:...:..:.xx...x.........xx.......x.......:.x.:..:......::. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -7641613 -86588789 +3234 chr4 + 190214555 43356744 43356743 43356795 52 TAAATGTGCTAATTGCAAAAATAAATAAATAAATAAAGGAATGAAGGGGAAT chr4 - 94230402 61527893 61527892 61527942 32702461 32702460 32702510 50 TGAATGTGTT--TTGCAAAAATAAATAAAGAAATAAAGGAGCGAAGGAAAAT .:......:.--.................x..........::.....::... 10M2D40M 43/50 86.0% 50/94230402 0.0% 2/50 4.0% -18171149 -76059253 +8592 chr4 + 190214555 43362445 43362444 43363290 846 ATAAATGTAATTTAAATTTATTTTTTTCTTCTCTACTCAAATACCAGCTAACAGC--CCTAAGCAAACT-CAGACGGAGTACTGAATATAATCTTCTAACCTGACATTTTGGTCAGAATCAATCTATTCATTTTTTTTCACAGT---CCACCCAATCTGGATATATAAAGTGGTTGAACTTTATTGGAAGTAACAG------------AAAGCAAAATAGATCGAACTCAATGTTGTTAAAAATGGAATATTTTAATATGTGAGTTTTGCCAGGATGTGATTTGAAACTGCTTTTATGCTAAATATAATTTGACAGAAATGACAGCATATGGACTTCCAGTTATCATTTATTGTATAGTTCT---TTGACTTCACTTTTTTGTATTCACTGAATATAAAAAATAAATTTGGTACTAAATACATTTCTTGAAATATCAATAGGGTTTGGCAGTGGCAGCATCACAAAACAGAATCATACATAGTATCTAAGGAGAACTCTGAAGCAA-AACAAGCATCAACTGTGTAAACTAAACCCATCAGTTCATTATGTACACATCTGCA---------TACTGAATTCTAACCTGGTTATTCAAATGATCACCTCCAAAAGAACATTAGGGAATCAAGAATACCAGCTGATAGATTTTACTTCTGCTTATTAATGATGAGTCAACAAAAGCCAAGAGATTTGTAAACAATTTAG-----ATCTTCAGAATAGAGTTAGGCAG-ATTATCTACCTGCTAACATATGTATTCCTAAAAGTTAAAGAGCTTACTTGTAACAAATAAGTGGCATTTAAAACTCACTAAGTACCATTTGACTTCCAAATAAACATTAAATATG---TAATTTTGATGGCTAATAAAAATTTCTGAACT chr4 - 94230402 24348617 24348616 24349397 69881006 69881005 69881786 781 ACACATGTAACTGAAATGATTTCATTCTACCTAGACTTGAAATCGAAACAGGAGAAATCCAACCAGACTTCAGAAGAGCTACTGAAAGTAAATTTT---CCTGAC---TTCCTTAGATACGCTCTGTTCATGATTTCACAATGTAAGCAAATCAGTATGCAAACAAAAAGAG-------CACACTGGAAATACCAGTACTCAAACACAAAAGAAAAAAAAATAGAATGCATGTTTGTTTACTTTGGCACACTTGAAAATACAAATGTAAAATGGATGTGACACAGAGCTCCTGTTGAACCTAAAGAGATTTTTAAGACA-------ATAAGG----TGAGGTAGCACTT----CATGGCTCTGTATTTGGTTTGCTTTTTTGCATGTTC-----------------------ACTACATACATTTCACAAGGTGTCA----------------GTAATAAAAGACAAAAAAGTCAAAGCT-GCATCTAAGGACACTGCTGAAGCAATAACCAAAATTAATTGAATAAATGAAACTCATTAATTTATTATTT---CATGTGCAGACAGTACTTGCAGGGTTCCATCAAGGTTAATCATTTTAACTAACTAAAAAGACCACAAGGGAATGGTGAATTCTAGATGCTGGTGTTGAAGCTTGTTTATTATTGGTGAGTAAATAGAAGTCAAGGGATTTTTAAACAATTTAGAACTCATCTTTGTAATAAAAT--GACAGCATTAT--------TGACATGTGTAGTC-----------ACACCCTATCTTTGTAATTTTAGCAGCCCAAGAAAATTGTTAAGAA-------------AAATAATCATCAGAAATAATTTACTTATGATGAATAATGTAATTTGCAAAACT .:.x......:.x....xxx..:x..::x:..xx...::..xx.x.:x:.:x..x--:.:..x..:...-....x.::x.......x:...x:..:---......---..xx.:...xx.:x...:.....xx...:x..xx..---.x.x:..:.x..x.x.:.x....x.-------:x:.:.....:..x...------------....x....x.:..x...:x..xxx.....x.xxx...x.:.:..x..x..:::.:.x.x:xxx........:x:::.:..x..x..:x:.:x..x:x:....xxx...x.-------...x..----:x..x..x..:..----:..:.:...---..x:x..::........:..x:x.-----------------------....x.........x::.::.:...----------------.:.::.xx.x.x..x.:.:...x.xx.-.:.........x.x:x.........-...x.:x..:..:..x:....:x....:...:.:..:.....x.---...x....---------.:.x.::...:.x.xx.....x...xx.x.x.xxx::x......x..:x.......x:x....x.:..x..x.:.xx..x.xx::..:......x..:.....x..:.:...:....:.....x............-----.....::x....:.:.--.:...-.....--------.:....:....x..-----------.x.x.:..::.x.:xx.xx.x..::..x:xx:...x.:::....x.-------------......x...:.:.x..:---..x..x.....:x....:x..x..x.x:.... 55M2I12M1I26M3D6M3D36M3I25M7D17M12I111M7D6M4D13M4D9M3I24M23D25M16D27M1D25M1I44M3D8M9I136M5I16M2D5M1I5M8D14M11D46M13D18M3I32M 471/741 63.6% 781/94230402 0.0% 145/741 19.6% 19013828 NA +3158 chr4 + 190214555 43367240 43367239 43367311 72 TGAAAGAAAGAAAGAGAGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAG chr4 - 94230402 36858306 36858305 36858377 57372026 57372025 57372097 72 TGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ......x...::.............:.x:.x..xx.:::::::...:.:..x..::.x..::.......... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 6508934 NA +3125 chr4 + 190214555 43374787 43374786 43374853 67 TAGGTAGGTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAATAAATAGAT chr4 - 94230402 56275106 56275105 56275172 37955231 37955230 37955297 67 TAGATATGTAGGTAGACAGAGAAAGAGATGGGTAGACAGGTGGACGTGTACAAAGAAGCAAACAAAT ...:..x.........:...x.:.x....:.:....:..:.:..::x:..x.x....::...:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -12900319 -81330083 +3309 chr4 + 190214555 43384867 43384866 43384935 69 TATATATATTTATATATATTTATATATATATTTATATATATATTTATATGTATATATCTATGTATCTCT chr4 - 94230402 73418583 73418582 73418651 20811752 20811751 20811820 69 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCT .:..:....x:.........x:.:.........x.:.:......x...x:x..x..x......x.:... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -30033716 -64196686 +3766 chr4 + 190214555 43450745 43450744 43450914 170 TACTTATTATATTATATATAATATATATTTAACATATAATATAATATAATATATATTATATATTATTTATATATATTATATATAATATATAATATATAT----------TATTTATATATATTATATAT-AATATAT-AATATATATTATATCACATATATTATATATTATACTATATATTA chr4 - 94230402 67910050 67910049 67910222 26320181 26320180 26320353 173 TGCCCACTCTATTACATATACAATA-------CTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA--AAATATTTTATTAATGACACACTACATTA .:.::.:.x.....:.....xx...-------.xx.x......x...x.x...:..x...x..xxx..:......x............:..:......:----------x.....x::xx....x....-..:..x.-....:....x.x.--.x....x....xx..x.:..xx..:.... 25M7D67M10I20M1I7M1I13M2D29M 115/161 71.4% 173/94230402 0.0% 21/161 13.0% -24459305 -69771097 +3473 chr4 + 190214555 43452129 43452128 43452260 132 ATAATATATGTATTA----------TTATTTAT-TAATAATATTTAATATATGTATTATTATTTATTAATAATATTTAATATATATTAATATATAATATATATTAATATATATTATTTATATATAATAATATACTATATATTA chr4 - 94230402 19228117 19228116 19228258 75002145 75002144 75002286 142 ATAATCTGGATATTACAAAGTCAAGTTAATTATCTAATGGTATTCAGACTAATTATC-TAATCTACTTGCAATTTTAAAGGTACAGTAATAGATAATAGATAGTAATAGATAATAGATAAATACAGTAATAAATTATGTAGTA .....x.:x:.....----------...x....-....::....:.:xx..xx...:-.x..:..:.x::...x..x..x:..:.x.....x......x...x.....x...x..xx..x...:.:.....x.:...:..x.. 15M10I8M1I23M1D85M 91/131 69.5% 142/94230402 0.0% 12/131 9.2% 24224012 NA +3120 chr4 + 190214555 43452744 43452743 43452841 98 TATTATAAATTATAGTA-TAAATTTATAACATTAAATATATTTTTAATATATAATATATTCAATATATAATATTAAATATATATATG-AAGGGGAATTTA chr4 - 94230402 67910059 67910058 67910157 26320246 26320245 26320344 99 TATTACATAT-ACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTA .....:.x..-.:.:..-....xx....x:....:...:..xx.x.......x:.....xxx...........xx.:......:...-:..:x:...... 10M1D6M1I69M1I12M 71/97 73.2% 99/94230402 0.0% 3/97 3.1% -24457315 -69773087 +3034 chr4 + 190214555 43465157 43465156 43465207 51 CCGGGTTCAAGCGATTCCCATGTCTCAGCCTCCTGAGTAACTGGGACTACA chr4 - 94230402 18197142 18197141 18197192 76033211 76033210 76033261 51 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .:.........:.x...x..x.x........::::....:....:...... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 25268015 NA +3009 chr4 + 190214555 43491451 43491450 43491498 48 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGATATTTGCTTAAACACA chr4 - 94230402 9469859 9469858 9469906 84760497 84760496 84760544 48 TTCATTTCATAAAAAGAAAAAAAAAAAAGAAATACTTTCTTAAACATA .:.:.:...x.....:............:.:...:..x........:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 34021592 NA +3337 chr4 + 190214555 43492723 43492722 43492794 72 TATATATGTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATACACAAACACACAGAGATATATA chr4 - 94230402 33398804 33398803 33398875 60831528 60831527 60831599 72 TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATA ....x....:.x..x:x.....:..:.....:......:.:.:.:...x.x.x.:.x.x.........x... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 10093919 NA +3120 chr4 + 190214555 43492724 43492723 43492773 50 ATATATGTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATAC chr4 - 94230402 25393259 25393258 25393308 68837095 68837094 68837144 50 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ..:.:..::...:.:...:...:.x..................::..:.. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 18099465 NA +3129 chr4 + 190214555 43492726 43492725 43492775 50 ATATGTGTGTATGTGTGTGTGTATGTGTGTACACACACACATACATACAC chr4 - 94230402 25393259 25393258 25393308 68837095 68837094 68837144 50 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ..:....::.:...:...:.....x.....::.........:..::.... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 18099467 NA +3175 chr4 + 190214555 43554668 43554667 43554780 113 TGTTTTCCTGTACCCCGTAGGTTTTGCTAT--------GTTTTCT-------------------TTCCATTTCCATTTCCATTTAATTTTTTTTCTTTCTTTCCTTCTTTTTTTTTTTTGACAGAGTCTCACCCTGTTGC chr4 - 94230402 50147608 50147607 50147747 44082656 44082655 44082795 140 TGTTTCCTTGTATGCCATGGGATTTTTTTTTTTTAATAGTTTTCTATGAAGTAACTTAAGTTACTTCAAGTTTTTCCTGAGTCCAAGTTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCTTCTGC .....:.:....:x..:.:..x...x:.x.--------.......-------------------...x.x..::x::.xx:.::..x.......:..x:...x:..x...x..............:x.:......x:... 30M8I7M19I76M 78/113 69.0% 140/94230402 0.0% 27/113 23.9% -6592940 -87637462 +15038 chr4 + 190214555 43564642 43564641 43564998 357 AAAATGCAAAATCTGCTTCCTCTAACTGAAGGGATTTAAATTACATTGTGGATAAGATGTTGTAAGCACAGTAGCTAAAGCAGTGTTTTATTTCTGAAGTAAATGGACTGAAACAGATGGAAGGGGGAAAAGAGAGTTTTCCTAGAGGCACAGTGTCTGTGTGTCACCAGCTGTTGCTGGGAGATAATGTGCAATGGCAAGTGATGTACAGGAGGAAATCCAAATGCCTCCAGTCCTAGGCTTTGGACTGTTAGGAGAAAAGAGCCTTTCCTTGTG--TTCTTTTAATTGAAGGTGAAGCCTGAAATTTGCAATGCCCACTTAAAATGATCCTGCCTTAT--TTGATTGAAACATAAAACA chr4 - 94230402 24394692 24394691 24395045 69835358 69835357 69835711 354 AAAATACATGATCTGTATCC-CAGACAGAAGGGTTCTAAATTATGATCTGGATAAGATGTTGTGAGCAGATCAACCAAAACAGAGTATTGTCTCTGAGGTAAATGGACTGAAACAAATGGAAGAGAGAAAAGTGAACTTTCCTAAAGGCATAACGTC--TATGTCACCAGCTGTTACTGGCAGATAATGTGCAGTGACAAGTGATGTATAGGAGGAAATACAAATGCCTGTAGTCTTTTTCCTAG----TCTATAAGAGCAGCACATTCTCTTACACCTTTGTCTTGTTTAAAGGAAGGTCTCAAATTTACAATGGTTACTTACATTGCAATTCCTTTACAACTGAATGAGACTGGAAATA .....:..x:.....:x...-.x:..x......x.:.......::x.x...............:....x.x:.:.:...:...x..x..:.:.....:.................:.......:.:......x..::.......:.....:.::...--.:..............:....x............:..:...........:..........x.........x:....:.xxx.:.x.----x:..x:...:x..x:.x..::...:::--..:x.:.x:..x..:.x:.:.:..x......:.....x::.....x.x..xxx:.x.:...:--:...x...:..xx:...:. 20M1D136M2D86M4D27M2I62M2I19M 253/350 72.3% 354/94230402 0.0% 11/350 3.1% 19169950 NA +14394 chr4 + 190214555 43571201 43571200 43571510 310 TCTATTTTATTGAACTAGATATTCAACACACACACCAACTTCTGCAAATGATGAGTAGATTTTCTTGGCAGGCTTGCCTAGGTAGTTTTAAAAATGAATCCAGGCATTGACTGGTGTGTTTTAATTGCTATAATTTGAATAATTAATTCTATGTTTAGAAAATGAGTTCAAAGTGGTGTGTGATTAACCATGTTTAATGAAGTCATTACCTGATTAAATAGCATTTCATGTCCATGACTGATTATATCCAAATGCTAATCAATTTGATTTAAATTGTCTATATATATTTGAATTTGTTACACTTTTGTGT chr4 - 94230402 24398384 24398383 24398690 69831713 69831712 69832019 307 TTTTTCTTTTAGAATTAGATATTCAATCCACAATCTGGCATTTCTAAATGATCGGTAAATT--CATAGTGAGTTTGTGTAAGTATTTTTTCAGATGAATCAAACCCTTGACTAAGATATTTTAATTGCTATAATTTGAATAACTAATTCCAAGTTTTGAAAATGAGTTGAAGGTAGTATGTGATTAACTACTGCTAATGAAGCTGTTACCTGATTAAGTAACATTTCATGCTTGGAACTGATTATATCTAAATGCAAATTAAATTGATTTGAATTGCCAATTTTTTCCTGGATTTA-TACATATATATGT .:.x.:..x.x...:...........:x....xx.:::.x.:.x:.......x:...:...--.x.:.:::.:...:x..:...x....xx.:.......x.:x.x......::x:.:........................:......:.x....x...........x..:..:..:..........:.:xx:........:::............:..:.........::::x:............:......x...:..x.......:.....:.x..x.x.x::..:....:-....:x.x.:... 61M2D233M1D13M 223/307 72.6% 307/94230402 0.0% 3/307 1.0% 19172817 NA +3100 chr4 + 190214555 43585868 43585867 43585927 60 TCCCT-TTTCTACTAAAAAAAAATATATATATATATATATATATATATACACACACAAATT chr4 - 94230402 12217100 12217099 12217158 82013245 82013244 82013303 59 TCCCTATTTCTA--AAAAGGAGATATATGTATACATGCATATATGCATACATATACAAATT .....-......--....::.:......:....:..::......::.....:.:....... 5M1I6M2D47M 47/58 81.0% 59/94230402 0.0% 3/58 5.2% 31368768 NA +3146 chr4 + 190214555 43608094 43608093 43608149 56 CTTACATAACAACAAACAAACAACAACAACAAAAAAAACACTA-------CTCCATTTTATAT chr4 - 94230402 66785737 66785736 66785799 27444604 27444603 27444666 63 CCTACCAAAAAACAAACAAACAACAACAACAAAAAAAACACCAAACAACCTTCTCTTTTATGT .:...xx..x...............................:.-------:..:x......:. 43M7I13M 47/56 83.9% 63/94230402 0.0% 7/56 12.5% -23177643 -71052759 +3309 chr4 + 190214555 43635076 43635075 43635145 70 AACAAGTAACTCTCTAGAATAAAAATATATGTATATGTATATGTATATATATATATATGTGTGTGTGTGT chr4 - 94230402 19704256 19704255 19704325 74526078 74526077 74526147 70 AACAAGCAACCTGAAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ......:...::xxx:x...xx.....:..:....:......:.x.:.:...:.x:.............. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 23930820 NA +3174 chr4 + 190214555 43701749 43701748 43701820 72 TCCTACCATTTTGTTATTGTTTGTTTGTTTGTTTTGTGGTCTTCTCTTCCTTTTATTCTTTCTTCCTGTCTT chr4 - 94230402 26671542 26671541 26671606 67558797 67558796 67558861 65 TCCTAGCTTATTGCTGTTGTTTGTTTGTTTGTTTTCTGCTCTTTTTTTC-------TCCTGCTTTTTGTTTT .....x.x.x...:.:...................x..x....:.:...-------..:.x...::...:.. 49M7D16M 51/65 78.5% 65/94230402 0.0% 7/65 10.8% 17030207 NA +3229 chr4 + 190214555 43709682 43709681 43709769 88 ACCAGAGGCATAAAGCAAAAACAAAACAAAACAAAACAAAACAAAAAAAGAAGAAAGAAAGAAAGTAATGAATTCTGAAATATCTATA chr4 - 94230402 77704067 77704066 77704154 16526249 16526248 16526336 88 ACCAGAATGGTACAGCTAACAGAGGAAAAAACAAAACAAAACAACAAAAGCTGAAAACGATAGAGTAAGGGATATGGAGTTGTGTATA ......:xx:..x...x..x.x.::.x.................x.....xx....:x:.x.:.....x.:..x:x..:x.:.x.... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% -33994385 -60236017 +3126 chr4 + 190214555 43744659 43744658 43744798 140 AGCTCCTGGATTCACTGATTTTTTGAAGGGTTTTTTGTGTCTTTATCTCCTTCAGTTCTGTTCTGATCTTAGTTATTTTTTGCCTTCTGCTACCTTTTGAATGTGTTTGCTATTGCTTCTCTAGTTCTTTTAATTGTGAT chr4 - 94230402 15229576 15229575 15229715 79000688 79000687 79000827 140 AGCTCTCTGTTGCACTCAGTATTTCAAAATTCCCTAGCACCTTTTGCTGCTCTTGCTCCTTCCTAATTATTATTATTTTTTTCTTGAGAGAACAGTTTGAGTTTGATCAATATAGAATCTGTGATTTTTCTAATTGTGAT .....::x.x.x....x.x.x...x..::x.:::.x.:::....xx..x..::x.:..:x.:..:..:x.x:.........x.:.xxx:xx..xx.....:.x..x.::x...x.xx...x.::..:..:.......... 140M 82/140 58.6% 140/94230402 0.0% 0/140 0.0% 28515083 NA +3126 chr4 + 190214555 43744659 43744658 43744798 140 AGCTCCTGGATTCACTGATTTTTTGAAGGGTTTTTTGTGTCTTTATCTCCTTCAGTTCTGTTCTGATCTTAGTTATTTTTTGCCTTCTGCTACCTTTTGAATGTGTTTGCTATTGCTTCTCTAGTTCTTTTAATTGTGAT chr4 - 94230402 15221296 15221295 15221435 79008968 79008967 79009107 140 AGCTCTCTGTTGCACTCAGTATTTCAAAATTCCCTAGCACCTTTTGCTGCTCTTGCTCCTTCCTAATTATTATTATTTTTTTCTTGAGAGAACAGTTTGAGTTTGATCAATATAGAATCTGTGATTTTTCTAATTGTGAT .....::x.x.x....x.x.x...x..::x.:::.x.:::....xx..x..::x.:..:x.:..:..:x.x:.........x.:.xxx:xx..xx.....:.x..x.::x...x.xx...x.::..:..:.......... 140M 82/140 58.6% 140/94230402 0.0% 0/140 0.0% 28523363 NA +3206 chr4 + 190214555 43757962 43757961 43758034 73 TATTAAATATAAATATATATTTATATATAAATATATATTTTATGTATATTTATATATACATTTTATGTATATT chr4 - 94230402 84528263 84528262 84528335 9702068 9702067 9702140 73 TATAAAATAATAGCATATTTTCATATATACATACATTTTATATGTATATTCCTGAACACACCTTATATAGACT ...x.....xx.::....x..:.......x...:..x..x..........:x.:x.:...::....:..x.:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -40770301 -53460101 +3917 chr4 + 190214555 43758012 43758011 43758084 73 TATATATACATTTTATGTATATTTATATATAAACATACATTTTATGTATATTTATATATAAACATACATTTTA chr4 - 94230402 61629647 61629646 61629719 32600684 32600683 32600756 73 TATATATATATTTAATGTATAATAAGACATAAATACAAATATTATGTATATTTGTCTATAAATTCAAATTTTA ........:....x.......x.x.x.:.....:.:.x..x............:.x......:x:.x...... 73M 57/73 78.1% 73/94230402 0.0% 0/73 0.0% -17871635 -76358767 +3001 chr4 + 190214555 43759773 43759772 43759827 55 TCTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAAGA chr4 - 94230402 44177686 44177685 44177740 50052663 50052662 50052717 55 TTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGA .:....x..:...............:....:...x...:.x:x....::.::... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -417913 -93812489 +3169 chr4 + 190214555 43759782 43759781 43759843 62 CAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAAGAAAAAGAAAAATTCCAA chr4 - 94230402 16697011 16697010 16697072 77533331 77533330 77533392 62 CAAAGAAAAAGGAGCAAAGAAAGGGAAAAAAAAAAAGAATAAACCAAAAGATAGAATCCCAA ....:.....::.:x...:...:.:....:.........x...xx....::x.:...:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 27062771 NA +5022 chr4 + 190214555 43761975 43761974 43762146 172 CCAGTCAAGTAAAACAGATTGATTTTTATCTGTAAATTGTTTTTCACTGTGAAAATCAGCTGGCTTCTGTTGTTAGAAATCAGAACACAGTGCATTAGGCTGAATAAATG--TGTTGCCTAGTAAACTGGCATGGAACTAAATTACATTCAACTGGTGAGTAGTTTAACGATTT chr4 - 94230402 24450633 24450632 24450800 69779603 69779602 69779770 168 CCAGTCAAGTATGGCTGATTGATTTTTATCTGCAAATTGTTATTGACTGTGAATGCTAGATGCAGGTTGTTGTTAAAATCAAGAGCACTGTGCATTCTATTTAGAGAACAGTGGTTGCATAATAAATCTGTTTTCCTATAAAAACCATGCAATTAGTA------TTAATGACTT ...........x::.x................:........x..x........x:::..x..xxxx:........:..x:x...:...x.......xx::.x.:x:..::--x.....x..:....::x.:x.xxxxx....xxx...x...:.:..:------....:..:.. 110M2I46M6D10M 111/166 66.9% 168/94230402 0.0% 8/166 4.8% 19311342 NA +3395 chr4 + 190214555 43781542 43781541 43781789 248 TATAATATATCATATAAAATAATTATACAGTTATTTTAAACACACATATATTGTATATAATATATATTATATGTAATAT---TATGTATAATATATGATATATAATATATTATGTATAT---AATACATAT-----AATATATCATATATCA-----TATATTATAAAAAGAATTCTATGTGTTAAGAATTCTTATAGTCACA--TTTAATATATTTATTAATATAATAATGTGTGTATGTACACACATAATATATATTATATTAT chr4 - 94230402 67910059 67910058 67910324 26320079 26320078 26320344 266 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACAGAACAATGCCTCAGACTCAGTGATGATTGTGGACACAAGTTCCCTGCTTTTATAGGTCTGTGCCTATGTGCAGATAGATACAATAAAGTTATTTTATCAT ...x.:....xxx...xx.x..x.....x:...xx.xx.xx.:.x..............:.......x.......:...---:....:x:...x..xxx.xx.:..xx.x...xx.:..---.........-----.....x.:..xx..x.-----..:....:.:..x:.xx:..xx.xx.:.:x:..xx..:.:.x....--..:xx.::x.....x::.x.:xxxx.:....:.x:..x.:...xx.x.xx....x...:.. 79M3I37M3I9M5I16M5I46M2I61M 155/248 62.5% 266/94230402 0.0% 18/248 7.3% -24128517 -70101885 +3096 chr4 + 190214555 43781595 43781594 43781688 94 TATATAATATATATTATATGTAATATTATGTATAATATATGATATATAATATATTATGTATATAATACATATAATATATCATATATCATATATT chr4 - 94230402 22326846 22326845 22326939 71903464 71903463 71903557 94 TATATAATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGATTAAAATACCTAACATTTCATATATAATACATT ........::..xx.........:..xx.xx..xx.....:.xx:......:..xxx:.:xx...x.:.:x...:..x........x...:... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 21454749 NA +3181 chr4 + 190214555 43787628 43787627 43787686 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAAAGGAATAAGAAA chr4 - 94230402 32280614 32280613 32280672 61949731 61949730 61949789 59 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAA ............:...:...:....:...x.xx.:......x..::.x...:..x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 11507014 NA +3236 chr4 + 190214555 43788797 43788796 43788869 73 TCTTTTTAAATATGTTGAGATTTGTTTTATGGTCCAGTTTTGCTTTTTTTTTTTTTTTTCTTTTTTTTTTGAG chr4 - 94230402 81713746 81713745 81713817 12516586 12516585 12516657 72 TTCTTCTGAATTTGCAGGGCTTT-TTTTCTCATCCAGCTTTGCTTTTCTCCTTTTTTTCTTTTATTTTTTGGG .::..:.:...x..:x.:.x...-....x.x:.....:.........:.::.......::...x.......:. 23M1D49M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% -37924949 -56305453 +3591 chr4 + 190214555 43796626 43796625 43796749 124 TCCACTGATCACTGTCCCCCCACCGACAAGGACACCAA------TTTAACAACTATCTACACAGAAGAAAGACAGAAAGAAAGAAAAAAAAAAAAACACCTTCATGAGAACCAGAACCAAAAATCAGATG chr4 - 94230402 29291002 29291001 29291125 64939278 64939277 64939401 124 TTCAATGATTACAACCCCTC-----ACATGGAGACCAAACCCTCTTTTTTAATGTGCTACACAGATGACAGAAAAAAAGGAAGAAAAAAAAAAATAGAAGTTAAGGGGGACTCAAATTAAAAA-CAGATG .:..x....:..x::...:.-----...x...x.....------...xx:..:xxx.........x..x...x.:....:..............x.x.xx..x.x.:.:..:x:..::.....-...... 20M5D13M6I79M1D6M 84/118 71.2% 124/94230402 0.0% 12/118 10.2% 14505624 NA +3161 chr4 + 190214555 43856482 43856481 43856545 64 TCAATATTCAGGGATTTGGACTTTTTTCTTTCTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCA chr4 - 94230402 3996896 3996895 3996959 90233444 90233443 90233507 64 TCAGTAATAAGGTTTTAGAATTATTGCCTTTTTTTTTTTTTTTTCTTTTTGTAATGGTGTTTCA ...:..x.x...xx..x.:.:.x..x:....:............:......x:....x...... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 39859586 NA +3537 chr4 + 190214555 43880450 43880449 43880558 109 AGGAAGGAAGAAAGGAAAGAAGGGAGGAAGGAGGAAGGAAAGGAAAGGGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA chr4 - 94230402 73209987 73209986 73210095 21020308 21020307 21020416 109 AGGAAGCAAGAAAAGAAAGAAACGATGCCGTAAGTATGAAAAAGATCCATGGGAGAGACAAAACAAGAAGAGGAAACGAGGAGGAAGCTAAAAGAAGAAAAAGACAGGA ......x......:.......:x..x.xx.x.:.x.x....:::.xxx:x:...:..:x..::x...:.:......x..:::.:...xx..:::...:...:..x.... 109M 68/109 62.4% 109/94230402 0.0% 0/109 0.0% -29329537 -64900865 +3011 chr4 + 190214555 43909415 43909414 43909513 99 AGAAAGAAAGAAAGAAAGGAAGGAAGAGAGACAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAAA chr4 - 94230402 30533164 30533163 30533262 63697141 63697140 63697239 99 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAA .:.x.:....:.......:..:..:.:....x.:.:.xx:x....:.:x:....xxx:.::x..:..xx...:x.::::.:x:......:.....:... 99M 59/99 59.6% 99/94230402 0.0% 0/99 0.0% 13376251 NA +9590 chr4 + 190214555 43923268 43923267 43923594 327 ATATTATTTTTTTACAGCCTCGTGAATTTCTCCAGCAAAATGCATTATGTTATTTTTTTCTTTACTACATATGTAGACATCACAAGGGGGTAAATGGTTATTAAGAGCAAAATTTACCACATGTAATGAGCACCTGCTAGG-ACTGTGGGTCAGTGTTTCT-GATGAGACATTGAGCAGCTACTTATTATAATTAGCGTCATTAGGCCTTTTAACT-GCTGCTCCCATAAGAAGAAAGACATTTTCTT-AACCTACTTTGTAAGTATTTATAATGCCTGCTGA----------TTTTCAGCTGTGAAGGCATCATTCATTATATTCACAGGTTTTTATGGA chr4 - 94230402 24491216 24491215 24491540 69738863 69738862 69739187 325 ATATTATTTT-------CCTGGGTAGTTATGCAGGGAAGTTAAATTTTATTGTTATTATATACAGTACACA----GTTTCCACAAGGGG-TAAATGATTATTGATATCAGATTGT-CCACATTTAACGAGCACCTGCTATGCAGAGTGGGTCAGTGTTTTTTGATGAAACATT-ACAAAATACTTATTATAATTAGTGTAATTAGGTCTTTTAAATAGCTGC-CCTATCTGTAGAAAATCAGATTCTCAAACTTACTTTGCAGGTGGTTATAATACCCACTGATTTAGATGAGTTTCTGGCTGTTCAGGCGACATTTATTAAATCCTCA-GTCCTTCTGGA ..........-------...x.xx.:..x:x.x:.x..:x.:x...x.:..:..x..x.x.x:.x....:.----.x:x:.........-......:.....:.x.x..:.x.x.-......x...:............x.-.xx..............:.-.....:.....-.xx.:x................:..x......:.......x.-.....-..:..xx.x.....:x..xx....:-...:.......:.:..:x.......:..::....----------...:::.....xx....:x....:....x..:.x..-..::..x.... 10M7D54M4D14M1D25M1D25M1I19M1I11M1D42M1I5M1D25M1I34M10I36M1D11M 230/311 74.0% 325/94230402 0.0% 30/311 9.6% 19432052 NA +4153 chr4 + 190214555 43949210 43949209 43949354 145 GTGAAAACACCATAAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGGAGAAAG--------AAAGAAAGAAAGAAAAAGAAA--GAAAGAAAGAAAAAGAAAGAAAGAAAGAAAG----------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGA chr4 - 94230402 44053973 44053972 44054137 50176266 50176265 50176430 165 GTGTAAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ...x..:x:x:..:x......x.:.:..:....:..:......::x...:..:x.:.:.:.--------:.............:.x:...--...x:x..::..x........x:.x:x...:----------....:.......:.:::x..x:...x....:. 61M8I21M2I31M10I32M 96/145 66.2% 165/94230402 0.0% 20/145 13.8% -104763 -94125639 +3508 chr4 + 190214555 43949222 43949221 43949373 152 TAAGAAGAAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGGAGA-----AAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGAAGAAAGAGAAAGGAAGGAAGGA chr4 - 94230402 29503817 29503816 29503972 64726431 64726430 64726586 156 TAAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAG--AGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAA ...:....::...:.....::...:....x:..:......:::.:.-----.x:....:...--.....x:...x:x..:x:.x..x...x.::..:.x.xxx..:.xx:x:..:..x.:..-......xx.:.:..xxx....x..:.:.x....:. 46M5I11M2D58M1I35M 94/150 62.7% 156/94230402 0.0% 8/150 5.3% 14445405 NA +3600 chr4 + 190214555 43949229 43949228 43949359 131 AAAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAG chr4 - 94230402 91538021 91538020 91538154 2692249 2692248 2692382 134 AGATAAAGCAGAATCCTGGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGA--AAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAG .:.x....x.:..xxxx...::.x.:.......:x..x::.........x.........:.x:x.xx.x...x.:.--...x.x.........x:::..-----x......x..xx..x::..:....:...:... 76M2D21M5I32M 86/129 66.7% 134/94230402 0.0% 7/129 5.4% -47588792 -46641610 +3111 chr4 + 190214555 43949230 43949229 43949289 60 AAGAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAAAGA chr4 - 94230402 87012026 87012025 87012085 7218318 7218317 7218377 60 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAA .:.:....:..x..::...:.:::..::...:...:.....:.x:.......:.....:. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% -43062796 -51167606 +3221 chr4 + 190214555 43949230 43949229 43949344 115 AAGAAAGAAAAAGGAAGGAAGGA-----AGGAAGGAAGGGAGAAAGAAAGAAAGA---AAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903347 10903346 10903469 83326934 83326933 83327056 123 AAAAACGCAGAGGTGAGGACTGAGTTTCAGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ..:..x.x.:.:.x:....xx..-----..:.....::::::.....x.....:.---.....x.:::xx...x......:........:::.xx.......x.:.:.x::x...x:..:... 23M5I27M3I65M 74/115 64.3% 123/94230402 0.0% 8/115 7.0% 33045883 NA +3249 chr4 + 190214555 43949244 43949243 43949366 123 AAGGAAGGAAGG-----AAGGAAGGGAGAAAGAAAGAAAGA---------AAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAAAGGAA chr4 - 94230402 56098404 56098403 56098540 38131863 38131862 38131999 137 AAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAA ..:....:....-----.::.xx....:....xx:...:::---------..:x.:...:..x.:...:xx......x.:...::...:....:..:.:x:.:..:::.:..:....xx.::....xxx:....... 12M5I24M9I87M 77/123 62.6% 137/94230402 0.0% 14/123 11.4% -12149160 -82081242 +3024 chr4 + 190214555 43949247 43949246 43949340 94 GAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903376 10903375 10903469 83326934 83326933 83327027 94 GAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ...:.:..:...:..:.:x::..:..x.x.....x::.:xx...x......:.:.:....:::.xx.......x.:.:.x::x...x:..:... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 33045871 NA +3929 chr4 + 190214555 43949279 43949278 43949399 121 AAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAAAGAAAGAAGAAAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAG--AGGAATAAAG ...x......:..........::.:::..:.......xx.x:.:....x..::----....x.:.:.xx:.:.x.......x...:..::..:..:::..x:xx....:.:..--.....x:... 53M4I56M2D10M 79/119 66.4% 123/94230402 0.0% 6/119 5.0% 13416115 NA +3286 chr4 + 190214555 43949283 43949282 43949398 116 AAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAAAGAAGAAAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 30533164 30533163 30533281 63697122 63697121 63697239 118 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAG--AGGAA ...x.:....:...........:::::..:.......xx.x:.:....x..::----....x.:.:.xx:.:.x::....:x:.....::..:..:::..x:xx....:.:..--..... 53M4I56M2D5M 72/114 63.2% 118/94230402 0.0% 6/114 5.3% 13416119 NA +12992 chr4 + 190214555 43949809 43949808 43950028 220 TTCAAATGAGCCATTGAAAAATAAATTGGCTCTTAGGTGTCAAGAAGAACATTAGAAATTACCTTTATGTGCCATTTTAGAGTTCCACCTGCTCACTAGGAAACAAAATGTCAGGAAATAATGAATCAACATTATACATATTGAAGTTGAAAGATAGGAAATAGGATTCAGATCAAAGGTCTCTGAGGGACAAAACTTACAAATAAATGAATTTTTGACA chr4 - 94230402 24495043 24495042 24495262 69735141 69735140 69735360 220 TTTAAATAAGTGATTCTGGAATAGATTATTTTTCAGGGGTTGGAAACAGCAGTAGACATTGCTTTTATATGCTATTTTCAAGCTACACCTGCTCACCATGAGGCAAGATGTCAGGAAATAATGAAGCAACATTATACATATTGAAGTAGCAAGATGGGAAATCAGAATCAGATCAAAGGTCTCTGAAGGATGAAACTTAGAAACAAATGAATTTCTGACA ..:....:..:x...xx::....:...:x:.:.:...x..::::..x.:..x....x...:.:.....:...:.....x:..:.x...........:.x..::...:..................x.....................x.x.....:......x:..x...................:...::.......x...:..........:..... 220M 171/220 77.7% 220/94230402 0.0% 0/220 0.0% 19454766 NA +5088 chr4 + 190214555 43963149 43963148 43963312 164 TTAAGAAAGTATAGTAACATTACTTTGAATTAAATGAAATCTCTTTGCCTCACTGCTCATCCACGGCCTGCACATGAGCTTCACATGTGTTATTTTAGTGTGTGGCTT------TTCACAATTTATTATATAGATAAATGGCCTTGAGTTCCTGTTTACTATTACTGTTT chr4 - 94230402 24501237 24501236 24501403 69729000 69728999 69729166 167 TTATAAAAGTTTAATAGCATCACTCTGTTTTTAATGAAACTTCACTGCCTCACTGCTCATCCATGGAATAGGTATGGTGCTCACAATTGTCATCATAATGTATAACCTAGCCACTTCCTGGCTTACCATA---GTAAGTGACCTTTGTCTTCTGTTGCATATTAGTTTCT ...x:.....x..:..:...:...:..xx..x.......::..x:..................:..xx.:x::...:xx:.....xx...:..:x..:...:.::.:.------...x::::...::...---:...:..:....x:x:.:.....xxx.....x.x.:. 108M6I16M3D37M 105/161 65.2% 167/94230402 0.0% 9/161 5.6% 19461912 NA +3230 chr4 + 190214555 43983692 43983691 43983761 70 AGGAAGGAAAGGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGGGAAGGGAAGGAGGGAG chr4 - 94230402 53665488 53665487 53665557 40564846 40564845 40564915 70 AAAAAGATAAGAAGAGGAAAGAAGGAAAAAAGGAAGTTAGGCAGCACAGCAAGAACTGGGAAGGAGAGAG .::...:x...:::.....:........:.......xx...x..x.x:.x...::xx.........:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% -9681796 -84548606 +3119 chr4 + 190214555 43983905 43983904 43983960 56 AAGGGAGAAAGTGAAGGAAGGAGGGAAGGAAGGGAGGAAGGAAGGAGAGAAAAGAA chr4 - 94230402 87012026 87012025 87012081 7218322 7218321 7218377 56 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAA .:..:...:.:..::..:.......::..:....:....:.:.x:.:......:.. 56M 39/56 69.6% 56/94230402 0.0% 0/56 0.0% -43028121 -51202281 +3074 chr4 + 190214555 43984863 43984862 43984916 54 GGAAGGAAGGAAGGAAGACAAAAAGAGGAAAAGAAAGGAAAAAGAAAAAAAGAA chr4 - 94230402 55458165 55458164 55458218 38772185 38772184 38772238 54 GGGAGGGAGGATGGGAAAAGAGGAGGGGAAAAAAAAAGACAGAGAAAAAAAGAA ..:...:....x..:.:.x:.::..:......:...:..x.:............ 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% -11473302 -82757100 +3025 chr4 + 190214555 43984878 43984877 43984922 45 AGACAAAAAGAGGAAAAGAAAGGAAAAAGAAAAAAAGAAAGAGAA chr4 - 94230402 81411838 81411837 81411882 12818521 12818520 12818565 45 AAGCAAAAAGAGGAAAGAAATTGAAAAAGAAAAAGAGAGAGAGAA .::.............::..xx............:...:...... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -37426960 -56803442 +3009 chr4 + 190214555 43996411 43996410 43996457 47 CACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x....::...:..::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -43376336 -50854066 +3131 chr4 + 190214555 43996413 43996412 43996459 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -43376334 -50854068 +3096 chr4 + 190214555 44013637 44013636 44013704 68 TTTTGATTTAATGATTTTGTTAACAAGCCAAAAAAAAAAAAAAAAGAGAGAGAGAAAATAGAAAATGA chr4 - 94230402 64904270 64904269 64904336 29326067 29326066 29326133 67 TCTTGCTTTGGTAATATTGACAGCAAGAAAAAAAAATAAAAAAAAGAGAGAGA-CAAATAGTAAACAA .:...x...::.:..x...x:.:....xx.......x................-x......x...::. 53M1D14M 51/67 76.1% 67/94230402 0.0% 1/67 1.5% -20890633 -73339769 +11833 chr4 + 190214555 44066579 44066578 44066947 369 TGTTTAAGTTTGCCATTCTTTTCTATTTTTAAAGGACTCAGCTATCTGCACACTACAGTTTATTTATATTGAATGAGACTGTAAT---------AATTAAATCATCTGGAAATTAACACTATAAGAAAGCCAAGGCTAT-TTGTCCTACATGTGAAATAATAAGCCAGTCTTGTTCCCAGTCTTTGCCATTATAATGTTATTACACAATTATTAAACTGAAATTCTTATTCCACTGCTGAAACAAATGGCCAATATCCATTTCCATCCTCTGATTGTTGGAGCATAGATGTCATTATATCATAAATGAGCCCCACATAAGGTAATGATTCTATTGTATTGATATATCTAAAGTAATTCCCTGAGGTTTCTCATTTTCTT chr4 - 94230402 24533498 24533497 24533869 69696534 69696533 69696905 372 TGTGTAAGTTGTACATAATTTAC-ATTTTAAAAGTCTGTAATCCTCTGTGTGCTCTTATTGTTTCATGT---ATAAAAGTACAACCTCATGCACAATTAAATCATACAGAGA---ATACATTAAGGGCTCTAATGCTGCCTTCTATGGCTTGTGAAATAATGAACATGTTCTGCTCACAGCCTTGGCCATTATAATGTTATTACATAGTCATTAAATTGAAGCTGTTATTCCACTTCTAAAAAAACTGATCAATATCCATTACCATTCAGCAATGGTTGGAGCCAAAATGCGATTATACTGCAAATGAGCCACAGACAAGGTAATGATCCCTCCACTTCAATATATTTAAAAGCATTCCCTAAAGCAGATAATTTCCTT ...x......xxx...xx...x.-.....x....xx:x:.:::x....::::..x:x:..xx..:..:.---..:.:.x.::..:---------...........x::..:.---.:..xx....::xx.:..x...::-..x.x:x:.x...........:.:.xx..::..:..x...:...x....................:.:.:......:....::.x..........x..:...x..x..::...........x....:.xx::..x........xx.:...:x......::::.........x..x.:...........:.:x::::x.::......:....:xx.......:.:.:xxx.x....:... 23M1D45M3D13M9I18M3D24M1I239M 242/362 66.9% 372/94230402 0.0% 17/362 4.7% 19533081 NA +55508 chr4 + 190214555 44173840 44173839 44175272 1433 GGAAAATTGAAAACAAGATGACAGTTGA---ATATTTTTAAAGAAGAGTCAATAGA-------AATCAAGAAATTCTAATACATTTTTCTTTTTTTAATAAATACATAAAGCTCTTTACCATTTCCCTCTATTATTTTGATTAACATGATAATAGGATCTTTCAAAGCATCATTATACCAATTTTCACAGCCCGATGTAAGACT-CATTTCACAGTAATAATCATGACTAGCATTAGTAAATGAATGT---TGATGCCATAA-ATAACAGTATAAGGCATATTTACACCATCTTAATATACATAAACACCATACACATACACAAAAAAGTCACAGATCCAGAACAAAGAAAATTCAATCTCCTAGACAGCTTACATTTATAGGCTTTGTCTAAAACATTTTTTTTTGCTTTTTTTTGTAATTTTTTTCTTTCCAAGCAACAAACAGATCTTCCCTATTTCTTGTGATTTATTTGTAACATTGTATTCATGCAAAAATAATACTTGTTTCATTGAATTAACATTTAGACAGCTTTAGATTTGGGTCCTATAGCCATCGTCTAAAATTTTACTTGATGTTGCTTCATCCATAT---------ATCATTTTAGTT---------------GGTATGATATGATG------GTTTGTTTTTGGTAAGTTACAAAATGACAAACATATCCAGTTGACCAGAGTTCAAAAACCAAGATACTAAGCTTGATCATGCACATTTTACTTTCATTCTTGTAAAATGGTTTGAATCAGATATTCCATTTTGATTTAACACTTATTGATTTAATATTTTTTCCTTTTTAATCATGTTTCTAAAAAGAACAACAACTAAAACATAAAAGAAAATACTGTCCCACATCCACTGTTCACAACAAGGAA-GAGCAGCAAGAATCAC------------ACTGACCATTGTTAGGACATCAGTCAGGTGGTGACACTGTAGTAAACATTGAATGTCATCAAAATACTGCAGGAATGTGACAATTACTATAACCCATACTTCTGCAACAGTTCAGATTGCCATTGGCGTTTGCGCTCTGGAAAATAATCTGGAATGTGGATTTTTTTAAAATCCTGAATACACTTTTTCATTTCTTCTTCCACACTTAGCTTCTCACAGACTTTCTTTTTGGACAGATTTGTTTCCCGGGACTTGCTGATGAGGGTCTGAAAGAGTTCACTGTTTCTGCGTTTGTCTGGTGGGGGTATCCATTGTACAGGTGCTTTTTTAGAGGGGCGATCCAATGTTAAAGTGTTAGGTTGGTGAGCTGTTGCCTGCTGGGCACTGGATGGGTTGTCCTGGGGAGTGCTTGCCTCTGAATGGCTGTCACAACTGGAAGTGGAGAGCTCATTACAGGAAGTCCCACTTTCACTTCCTTTATCAGTGACTTTGTCATGTTTCCTATCTTCATGTTCTTGTTTAGGTGATACTATTTTCTGAGGTGGTCCTA---AAAAGGAGGAAAAAAAAAG chr4 - 94230402 24558600 24558599 24560006 69670397 69670396 69671803 1407 GAAAACATTAACAAAAAATAACAATTGCTTCACACGTTTAAA-AAGAGATAGGAGATACCAACAGCCAAGAAAATCTACCAGATGGTTCTTTC---AATAAATACATCAAAGTCTCTTTTATTTTTCTCCA--GTTTTAGCAACTAACATAACAGAAACTTTCAAACCATCAA---ACCAGTTTTCAAAATCTGCCATAAGTTTGCATTTCACAGAAATAATCCTGACAAGCACTAATAGATGAACGTCGTTGGTGCAATAATAAAACAGTATAAGGCATATTTACACCATCCTTACATACA-GAACATTTTACACA----CAAAGAAATCACAGACCCAGAACAAAGCAAATTCAATCCCTTAGACATTTTACGCTTATAGGCTTGGAGTCAAAGAA------------------ATAATTCT-------CCAAGCAACAGACAA--CCTCTTGTTCTTGTGTGATTTATTTGTAACATTGTGCTCATGCAAAATAGGTATTTGCTTTATTGCATTAACATTGAAAGAACATTGGGATTTAGTTCTGAAACCA--GTTCAA---TCAACCCTCTTTCTCTTCATCCATAGCAAGTCTGAGCCATTTATATTCGTGACATAAAACGAGGCATTAACTGATGTCTGAGACTTTTATTTGACAAGTTCCAAAATGATAATGAAGCTCAAATGACTACAGTTCGAGAACCATCTT-----TCTTCACCATGCACATTTTTCTTT-GCTATCATGAGGTGGTTTAGATGAGACACTTCTTGTATTTTTAA----------------GTTTCTATCTTCTTATATATATATTTTAAAGAAACCATG-------------------TACTATCCAACATCCACTGTTCACAGGAAGAAATAAGCAGCAGGAATAGCTCTGGTGGCAGCACTGGCCAGAAGAAGGACATCAGTAAGTTAGTGGCAACTTAATAAACAACAAATGTCCCAGAATTATGTCATGAAAGAGTTGAGTACTATAACCCATACTTCTGTAAGAGTTCGGACTGCCAGGGACGTTTGCGCTCTGGGAAGTAATCTGGAATGTGGATTTTTTTAAAATCTTGGATGCATTTTCTCATTTCCTCTTCAACGCTCAGCTTCTCGCATACCTTCTTTTTGGAAAGATTTGTTTCTCTGGACTTGCTAATGAGAGTTTGAAAGAGTTCACTGTTCCTGCGTTTGTCCGGTGGTGGCATCCACTGCACTGGGGCCTTCTTAGATGGACGATCCAAAGTTAGAGTATTTGGCTGGTGGGCTGTGGACTGTTGAGTGCCAGAGGCATTTTCTTGAGGAGTGCTTGCATCTGAGTGGCTGTCACAGCTCGAAGTGGACAATTCGTTACAGGAAGTCCCACTTTCACTGCCCTTGTCCAAGACTTTGTCGTGCTTCCTCTCCTCATGGTCTTGTTTGGGGGAAACAGTTCTCTGTGGGGGCCCTATTGCAAAACAGGTAAGAAAAAG .:...xx.x..x.x..:..:...:...x---.:.:x......-.....x:.:x...-------.::.......x....x:.x..xx......:---...........x..:x...:.x::....::...:.--:....:::x.x:.xx....:..:.x........x.....x---....:......x.::.:.x::....x:.-..........x.......x....x....:..:..:.....:..---..:...x....-.x...........................:.x.:.....-:....::x......----....:..:.......:...........x..........:.:......x:....::..........x.xx.x...x.x------------------:.....:.-------..........:...:--.:..::xx.:.:x......................::..........xx::..:...:..:....x.........x.:.x.:.x..:.:x..x:..:..:x.:...--..::..---.:x..::xx.x.:x...........x---------::.....xx:..---------------..:..x.xx.....------::..x.x....::.....x........:..xx.x:::..:x....:.x.....:.:.....xxx.-----x...x.:............x....-::.x.::.:.::......::..x...:.:.:.x.x.xxx.....----------------:...:.x:...:...xx:..:.x.:.x...::...x.::-------------------....:...x................:x...:..-:.......:....x:.------------....:...xx:xx...........x..x.:...:..x:x..:......x::......x:x:..x..:xx..x...x.x.x::.x....................:..x.....:..:.....xx.:..............:..:.............................:..:..:..:...:.......:.....x..:..:........:..x..:...........x...........:.x.........:.....:..:.................:...........:.....x..:.....:..:..x..x..:..:.....x..:........x....:...:..x..:.....:.....x.x...:..:.::.::..x.x:..x..:..:...........x.....:...........:..x........x.::..:.......................x..:..:..x:x.........:..:.....x..:.....x........:..x..x..x:..:....x..x..:....---x...:x...x..:...... 28M3I11M1D13M7I30M3D35M2D40M3D28M1I43M3I11M1I39M1D14M4D77M18D8M7D15M2D106M2D6M3D26M9I12M15I14M6I65M5D24M1D44M16D39M19D33M1I16M12I550M3I19M 1000/1346 74.3% 1407/94230402 0.0% 148/1346 11.0% 19615240 NA +10534 chr4 + 190214555 44183637 44183636 44184015 379 TGCATGATTTCTGGGTAGT-TCTAGGTGTGGGGATGTTTTTAAGAGTATTTCTATATTTTTTCCTTGAATACACAAGCATTTCCAAACAAAGTCTATGTACACAGCTGCACATTTGAAAAAAAAAACTTTTCATTTTAATCTCTTTACCTGCCCAGTGATGATAAAACATGATAGGTATGTAAAATGTGTCTGCAACAGTCACAATTCCTAGAAGGGAAATTATCCTTTAATAGTACTAAACTCAATGATGTGTGAATGGTTATGTGGTACTTAAACAGAATGAACCAATCTATCTTAAATATTAGCACCACACGCTTCTAAATATTAAGCACT-TGAGTCAAAAGGGAAA--------------AACTCCATTTTGATTTCACAAACATTTACT chr4 - 94230402 24566740 24566739 24567120 69663283 69663282 69663663 381 TACATGAAGTCTTGTTAATGTTTAGAAGCATTAAAATTTCTAGGATTGTTTACTTGTTT-------GAATACATGGATGCTTCAATATCAAGCATATGAGTGTGACTGCACACCTGGTTAAG----TCTTTTATTTAAATCCCCTTACTTGCCATGGGAAGTTTAA---TAAGCAATGTGTAGAAACTAGCTGTCCTGGGCACAGCTCCCACAGGAGAAATTACTCTTTAATAGTGTTAAGCTTGGTGGTGTGTGAATGGCTATGTGGTACTTGAAGGGAATGAACCAATTCATCTTTCAAATTAGGACCACATGCCTGAAAGTGATAAGTGCTCTGTCTCAAAAGAAGAAAAAGAACACAGCATAAATATATTTTTTTTTCAGTCACATTTACT .:.....xx...x.x..:.-.:...:x.::xx:.x:...:..:..x.:...x:x.:...-------.......:::::::...x.x.:x...:x....x::::::.......::..:xx..:----::...:....x....:.:....:....xx.x..x.x.x..---.:.xx::.:....:..xx.:x...:xx::.x....::...:.x.:.:.......::..........::...:..:::..:...........:............:..x:............::.....xx.x.....x......:..:.xx..:.:x....::..-..xx.......:::..--------------..x.x:.....xx.....xxx......... 19M1I39M7D56M4D40M3D165M1I16M14I30M 238/365 65.2% 381/94230402 0.0% 30/365 8.2% 19616897 NA +3034 chr4 + 190214555 44192466 44192465 44192527 62 AAGCAAAGATACACACACACACACACACACACACACACACACACACACACAGAACTGATAAA chr4 - 94230402 56248437 56248436 56248498 37981905 37981904 37981966 62 AAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGATAGA .........:.x...............:.....x...xxx...x.x..x..:x.xx....:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -12055971 -82174431 +3160 chr4 + 190214555 44212916 44212915 44212967 52 TTTTGTCTTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATGGAGTCT chr4 - 94230402 69960042 69960041 69960093 24270310 24270309 24270361 52 TCTTGTTTTTTTCTTTTTGTTTGTTTGTTTGTTTTTTAATGAACTAGAGTCT .:....:...x.:.....................x..xx...:x.:...... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -25747126 -68483276 +3033 chr4 + 190214555 44218108 44218107 44218158 51 TACATTTTAAAATGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGG chr4 - 94230402 10464387 10464386 10464437 83765966 83765965 83766016 51 TATATTTTCAGAAATCCTTCTTTTTTTTTTTTTTTTGTTTTGTTTAAATGG ..:.....x.:.x:.....:................x....x..x.:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 33753721 NA +8327 chr4 + 190214555 44245545 44245544 44245847 303 TTTTATTTGCAGGGAAAAAATTTAAGCTATAAGTAGAAAGATAATATTTTTTAATATT-------------TTTCTCATAATCCAAGAAAGTGATAAAGGAGACTATCAAGAAAATGAGATTAAAAGTGTAGTCTAATCAGTGTTAAAATGTTAATATTCCAATAACCATATGCCAGCAGTAAATTTAACATAATTAGCATTTTTTTCCTATCAAGCAATAAATCAAGTAGAAGACTGATTGCAGA-AAAAGCAGCTAACTCTTATGAAACATTCTAACATTCGTTTTCTAAAACTAAGATTCCTCCAGACAGATCA chr4 - 94230402 24580570 24580569 24580874 69649529 69649528 69649833 305 TTTTTTTTCCATACAAAAACTTCAACATCTTAATTAAAAACAAGTATGTTGAAAAACTAAGGAAGAGGCATTTCCTAATACTGCATGATAA----AAAGCCAGCTAAAAGTATAATGAGATAAGGAATACAGCCTAATTGGTGATAAAATGTCAATATTCCAATAGATGCATACCAGCAGTCCATTAGATTTAATTAG----GCTCTCTCAGCAAGCAATAAATCATGCAAAAGACAAACTGGAAATGAAATCAGCTAACTGATATGAAACACTCATGGGCTGGTTTACCAAAACTAA----TCTCTGGACAAATTA ....x...x..x:x.....x..:..xx.x.x.:.x:...:xx.:...x..xx..x.:.-------------..:..x...x.x..x..x.:----....xx::...xx.:x.x........x.::.:.::..:.....::...x........:............:x:::..:........xx...x:.:x.......----x:.:..::.x..............x.:.:.....x:.:..x.:.-:...x.........xx.........:..xx:x::.x....x.:........----:...::....:..:. 58M13I20M4D103M4D44M1I51M4D15M 196/291 67.4% 305/94230402 0.0% 26/291 8.9% 19664975 NA +3207 chr4 + 190214555 44324037 44324036 44324084 48 GTATAATTAAAAAAAAAAAAACAAAACAAAACAAAACAAAAAAAAAAG chr4 - 94230402 36789678 36789677 36789725 57440678 57440677 57440725 48 GTATCATTAGAACAGGAAAAACAAAAGAAAACAATACAAAAAAAAAAG ....x....:..x.::..........x.......x............. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 7534359 NA +3270 chr4 + 190214555 44343788 44343787 44343883 96 AACAAAATCAGTGTCTACTACCTGAAAATTAACTGA-TCACATTAC-AGGGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTTTGAGACA chr4 - 94230402 45429601 45429600 45429696 48800707 48800706 48800802 96 AGCCAAATCATTATCTCCT--CTATAATTTCTCTAAAGCAAATTGTTGGGGTTTTTTTTGTTGTTGTTGGTTGGTTGTTTTTTTTTTCTTTTAGTACA .:.x......x.:...x..--..:x..x..xx..:.-x..x...::-:.....................x...x.......x....x:....::x... 19M2D15M1I9M1I51M 70/94 74.5% 96/94230402 0.0% 4/94 4.3% -1085813 -93144589 +3154 chr4 + 190214555 44343812 44343811 44343866 55 AAAATTAACTGATCACATTACAGGGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTT chr4 - 94230402 37883969 37883968 37884023 56346380 56346379 56346434 55 AGAATTGACTGAAAATCTTCAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTT .:....:.....xx.:x..xx:.xx.............................. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 6459843 NA +3051 chr4 + 190214555 44343834 44343833 44343877 44 GGGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTTT chr4 - 94230402 75733743 75733742 75733786 18496617 18496616 18496660 44 GGTTTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTT ..x......................x..x.....x...x..... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -31389909 -62840493 +3126 chr4 + 190214555 44343837 44343836 44343871 35 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTTGTTTT chr4 - 94230402 71160909 71160908 71160943 23069460 23069459 23069494 35 TTTTTTTTGTTGCTGTTGTTTGTTTGTTTTGTTTT ............:...................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -26817072 -67413330 +12261 chr4 + 190214555 44347719 44347718 44348159 441 TACAATTAATAATAGAATTTTATATATAACTTTTCAGCTATAAGGTTTTAAAATCAGCTGTGAATTTAGCAGTATTATATGCATAAAACGGAATCATGCTAATGGCAATGCAGGCAGCCACATGTTTCTCCTGGTACCATTA----------AAGAAATAATTAGA----TACATTTATAGGGAAAAA-ATGTCATTATTATCCCTGTAGGGCATAATAC-AGCCTTTCACTTGAAATAAGTCAGCAAGTTACCTTCATGAGAAATAATGTTATATGAATATCACAGTTGGAGAACTGTTCTCTAAATACACACAGCAAGTACAAAAATTATAGCCCAATTTTGCTTAGAAATTCACCATTCCTTCCTAATGAGTGTATCTAGCTTCAAATAACATAGAAGGACAAGGTAAAGACCATAATTAAAATGA--CTGTATTAC--------ACAAAAAAGAACATGCAAC chr4 - 94230402 24618695 24618694 24619150 69611253 69611252 69611708 456 TGCATTTATTAACAACCTACTGtttaaatatttaaaaatata---ttttaaaGACAG--GATAATTTAG---TGCCGAGTGTACAATGTAAAGTTATTTCAATGTTAATGTATGTAGCTGTATGGCTACCACAGT-CCAGTAGTAGAGCTGGAAAACATAATTAGACCAATACTTTTCTACAGAGAAATATGCTTCTATTATCTCAGTGGGAGATAACCCTGGCCTTTAACTTGAAATAACTCAGCAAGTTACCTTCCTGATAAACAATGCAATATTAATATCACAGCTGG-GAGCAGTTCTATGAACACTCACAGCAGGGATCAAATTTGTTGTTCAATTTTTGTTGGAAATATAACATTCCTTTCTAATGGGCATCTTTAGCTTCATGTAAGAGAACAAGTAGAGTTCAAGA-TATAATTAAAGTAATGTTGTATTAAGTTAAAGGACAAAATAATCCATGCAGC .:..x...x...:.:xx.x:.:.x..x.xx...xx.:x....---.......:x...--.xx.......---.::::x:..:.:..x::::.:.:..x::....x:....:.x.:...:::...x:.x:.x::..-...x..----------..:.x.........----...x...x..x:..:...-...::x:.......:.x..:..:x....:x.-:......x...........x................x...x...:....:x....x..........:...-..:.x.....x.:..:..x.......:.x.:x...x..:.x.::.......xx..:.....x:.x........:......:.::.x.:........x:...x.x.:x.:.xx:..x.x....-:.........:.:.--:.......x--------......x.:xx......:. 42M3D12M2D10M3D63M1D6M10I14M4I18M1I31M1I70M1D122M1D14M2I9M8I19M 297/430 69.1% 456/94230402 0.0% 37/430 8.6% 19729024 NA +3830 chr4 + 190214555 44400912 44400911 44400985 74 CCACAGCCTTGAACTCCTGGGCTCAAGCAATCCCTCTGCCTCAGCCTTCCAAGTAGCTAGGACCACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:......:x:.:..:.....:.....::x.:.x:xx.x.........:.........:.:..:...x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 26203786 NA +3780 chr4 + 190214555 44410424 44410423 44410502 79 AGGTAACTACAGTTATTATTCTCATTTTATACTTGGGAAGATTGAAGCAGACAAAGGTTAAGTAATTTTCCCAAATTCT chr4 - 94230402 10729188 10729187 10729263 83501140 83501139 83501215 76 AGGTAATTAC---TATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ......:...---...:.x:::.......:.xx......:.:...:...x.:.x..............x....:.x... 10M3D66M 58/76 76.3% 76/94230402 0.0% 3/76 3.9% 33681236 NA +3300 chr4 + 190214555 44411373 44411372 44411418 46 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGGAGGGAGGGAGGAAA chr4 - 94230402 6438506 6438505 6438551 87791852 87791851 87791897 46 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGA ....:.....:.....::.................:...::...:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 37972867 NA +3428 chr4 + 190214555 44411374 44411373 44411495 122 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAGGA-GGGAGGGAGGAAAATGATGTAAAA--GAGTTATATTCATATAATCATTATTTGTGATCTCCTTTGAGATAAAGTTGAGAACATAATGCCAAA chr4 - 94230402 88558242 88558241 88558359 5672044 5672043 5672161 118 TCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAACTTTATTATGTGTAGCTGTTCATCCTTTGT----TCTTTTCAGCTGTACTT---ATCATAATACCAAA .........:.x...................:-...:...:..:x..x:.x::....--xx:....:.x:.xx.:x....:x.....----..:...x..x.:x.x..---.x......:..... 32M1I24M2I28M4D17M3D14M 83/115 72.2% 118/94230402 0.0% 10/115 8.7% -44146868 -50083534 +3301 chr4 + 190214555 44411378 44411377 44411430 53 AAAAAAAAAAAAAAAAAAAAAAAAAGGAGGGAGGGAGGAAAATGATGTAAAAG chr4 - 94230402 40472547 40472546 40472599 53757804 53757803 53757856 53 AAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAG .......:.......::..............:...:..::::x...x...:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 3938831 NA +32094 chr4 + 190214555 44447557 44447556 44448418 862 ACTTACGGAAGAAAATGTACTCGGTGTAGCTGCTCCAGATCTTGTCGTCGCGGTACTGGTTGACGAAGGCGGCGGTGCCCGAGGAGTTACACGCCACCATGTGGAAGCCGGCCTCGGACAGGCGATCAAAGGCCTGCTCCAAGTAGGTGAACTTGAGGTAGAAGCGGGACGTGTACTTCTCCGGCTGCCGGTCGGGGTCGCGGCTCTCGTTGAGCGTGTCCCCGAAGACCTCCTTGGCCAGCGCGATGCGCCCGCACACCATGATGCGCGCCACACGCCGGAATTTGGCGTCGGCCTGGTTGTCGC-GCACGGTGGTGTAGGAGCCCCGGTAGCCCAGCGTGAGGAAGCCCGAGCGCTTGTCCTGCGCGCCGCCGCCGCCGCCACCACCGTGCGCTCCCGGGCCCGAGGGCACGGCGGCCGCCGCCCCGCGCAGCAGCAGCGC--GTCGCTGCTACCCTGCGA--GACGTTG---------------TCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTGCTTGGTGACCTTGGGCGACAGCAGCTTGACCAAGTCGGTGAGCTGGAAATACTCGGCCTCGCGCAGCAGCCGCTCCTTCTCGGGGAAGTGCTCCGGCAGCGCGAGTTGCTTGTCCCGCAGATAATCCAGCACGTACCTGAAAAGGAAGCCGTCCCGGTCGATGAAGAAGCGCGCCCGGCTGTCCCTGGGCAGCTCGCCCCGGCGCCGGGCGCCGCCACGGGGACTAGAGGGCGAGAACATGCTGGCCAAAGTACT--GTCCGGGACGCTGAGCAGCGTCGAGTGCTTGGTCACATAAACCTGGCCGCCTACGTTCAGCTCCACTACTTCAGGGAAGGGCGAGGGTGCGCAGGG chr4 - 94230402 82748544 82748543 82749393 11481010 11481009 11481859 850 ACTCACGATAGAAAACATATTCGGTGTAAGAGGTCCAGATCCTGTCGTCTGTCTGGTCATGGGCGAAGGCACAGGTGCCCGTGGAGTTGCAAGCCACCATGTGGAAGCCAGCGTCGGCCAGTTTGTCAAAGGCTTGCTCCAGGAAGGTGAATTTGAGGTAGTACCGGGAGGTGTACCTCTCCGGGGGCCTGTCTGGGTCCCTGCTCTCATTCAAGGTATCCCCAAAGACCTCCTTGGCCAGCGACGTCTTGCCGCAGACCATGATCCGCGCCACCCGGCGGAACTTGGCATCCGTCTGGCTGTCCCTGCCCAGC-GTGTAGGAGCCGCGGTAGCCGATGGTGATGAA-CCCG-------GCCCTGCG-GATGTCAGGGCCGGCAGCGCCCGCCGTGCCCGTGCCCCCGGCACCGCCAGCCCCAGCACTGGGGAGC-GCGGCGCTGGCAGCGGTCAGGCTGCGGGCGGCGTCGGCACTGGGGGACAGCTCCTCGGGGTCACTTTGGCACGGGTCGTCCCCCAGCGAGTTCTGCTTGCTGAGCTTGGGGGCCAGCATCTTCACCAGCTCTGGCAGCATGAAGTACTCAGCCTCTCGCTGCAGCCGGCTGCGCTCCGGGAAGTGCTCGGGCAGCACCAGCTGCTGGTCCCTCATGTAATCCAGGATGTAGCGGAAGAGGAAGCCGTCCCGATCCACGAAGAAGCGGCCCTTGCTGTCACGAGCCAA---------------------GGAACGGACGTTCTTCTGCGTGAACATCTC--CCAGAGCAGCGAGCCCGGCACGCTGATCAGGGTGGGGTGCCGGGTGATGTAGACTTGTCCGCCCACGTTGAGCTCAATGATTTCAGGGAAAGGCAAATCCTCGCTGGG ...:...:x......::..:........:xx.x........:.......xxxx.:x.x:.x.:.......:xx........x......:..x.................:..x....x...x:x:........:.......:.x.......:.........x.x.....x......:.......xx...x...x.....x.x......:..x.:x..:.....:...................xx:.x:xx.....x........x........x..x.....:.....:..x.:....:....x.-..x.:.:-...........x........x.xx....x...-....-------.:......-.x:.:.:xx....x..x.:..xxx..:x....x....xx..xxx..x.:...x.x..x.:.x.x...-..:....--.:x..x.::.xx.....:--.:...:.---------------.....x:....:..:.....xxxx.....x::x..x............x...x......x.x.....x...x....:x..x.xx...xx...:.....:.....x...x.......x::x:x...x...........x......:.x..:....x.....x..x:........x.:...x.x...:..............:..x.:.........xx..:x......x.x:.x..:---------------------.xx....:x::.xxxxx...x......x::--...:..:.x:--.:....x.......x...x..x.:....:x...x.::..:..:..x.....:.....x.....x.:x.:.........:...:.:xx:x...x... 306M1I7M1D32M1D4M7D8M1D67M1D7M2I18M2I7M15I236M21D30M2D10M2I96M 600/828 72.5% 850/94230402 0.0% 56/828 6.8% -38300987 -55929415 +55649 chr4 + 190214555 44447557 44447556 44448525 969 ACTTACGGAAGAAAATGTACTCGGTGTAGCTGCTCCAGATCTTGTCGTCGCGGTACTGGTTGACGAAGGCGGCGGTGCCCGAGGAGTTACACGCCACCATGTGGAAGCCGGCCTCGGACAGGCGATCAAAGGCCTGCTCCAAGTAGGTGAACTTGAGGTAGAAGCGGGACGTGTACTTCTCCGGCTGCCGGTCGGGGTCGCGGCTCTCGTTGAGCGTGTCCCCGAAGACCTCCTTGGCCAGCGCGATGCGCCCGCACACCATGATGCGCGCCACACGCCGGAATTTGGCGTCGGCCTGGTTGTCGCGCACGGTGGTGTAGGAGCCCCGGTAGCCCAGCGTGAGGAAGCCCGAGCGCTTGTCCTGCGCGCCGCCGCCGCCGCCACCACCGTGCGCTCCCGGGCCCGAGGGCACGGCGGCCGCCGCCCCGCGCAGCAGCAGCGCGTCGCTGCTACCCTGCGAGACGTTGTCCTCCAGGTCGCTCTGGCAGCCCTCGTCGTTGAGAGAGTTCTGCTTGGTGACCTTGGGCGACAGCAGCTTGACCAAGTCGGTGAGCTGGAAATACTCGGCCTCGCGCAGCAGCCGCTCCTTCTCGGGGAAGTGCTCCGGCAGCGCGAGTTGCTTGTCCCGCAGATAATCCAGCACGTACCTGAAAAGGAAGCCGTCCCGGTCGATGAAGAAGCGCGCCCGGCTGTCCCTGGGCAGCT--CGCCCCGGCGCCGGGCGCCGCCACGGGGACTAGAGGGCGAGAACATGCTGGCCAAAGTACTGTCCGGGACGCTGAGCAGCGTCGAGTGCTTGGTCACATAAACCTGGCCGCCTACGTTCAGCTCCACTACTTCAGGGAAGGGCGAGGGTGCGCAGGGCCCCGGGGCGGCGGCGGCCGACGCGCCGGGCGAGCTGGACGAGGAAACCATCTCGCTAATGGGCAGGATGGTGCTGCCGCCGCTGCCCGTGTCCTTCAGAGCCATAG chr4 - 94230402 24644173 24644172 24645024 69585379 69585378 69586230 852 ACTTACTGAAGAAGATGTACTCGGTGTAGCTGCTCCAGATCTTGTCGTCCCGGTACTGGTTGATGAAGGCGGCCGTGCCGGTGGAGTTGCAAGCCACCATGTGGAAGCCCGCTTCGGAAAGCCGATCGAAGGCTTGCTCCAGGTAGGTGAACTTGAGGTAGAAGCGGGAAGTATACTTCTCGGGGGGGCGGTCGGGGTCGCGGCTCTCGTTCAGGGTCTCGCCGAAGACCTCCTTGGCCAGGGCGATCCTGCCGCACACCATGATGCGGGCGACGCGGCGGAACTTGGCGTCCGCCTGGTTGTCCCGCACCGTGGTGTAGGAGCCGCGGTAGCCCACTGTGAGGAAGCCCGAGCGCTTGTCCAG-------------------------------------------------------GCCGGCCCGCT-----GCAGCCGGTCGCTGCTGCCCTGCGAGGTGCTGTCCTCCAGGTCGCTTTGGCAGCCCTCGTCGTTGAGCGAACTCTGCTTGGTGACCTTGGGCGAGAGCAGCTTCACCAGGTCGCCTAGCTGGAAGTATTCTGCCTCCCGCAGGAGCCGTTCCTTCTCGGGGAAGTGCTCGGGCAGCGCCAGCTGCTTGTCCCGCAGGTAATCCAGCACGTACCTGAAGAGGAAGCCGTCGCGGTCGATGAAGAAGCGCGCCCGGCTGTCCCTGGGCAGCTGGCGGGCCGCCGCTGG--GCCGCCCCGG------CACGGCGAGAACATGGTGGCCAGCGTGCTGTCCGGGACGCTGAGCAGCGTGGAGTGCCTCGTCACGTACACCTGGCCCCCTACATTCAGTTCTACTACCTCGGGGAACGGCGAGCCCG---ACGGCCCC---------------------------------------GACACCATGTCGCTGATGGGCAGGAT---------GCTGCCGCCCGCCTCCTTCAAAGCCATGG ......x......:...................................x.............:.........x.....x.x......:..x.................x..:.....x..x.....:.....:.......:...........................x..:........x..xx.x.......................x..x..x..x....................x.....x.xx.................x..x..:..x.....:........x...........x.....x..............x..........x:........................x.-------------------------------------------------------....x.....x-----.....xx.........:.........::.:................:....................x..::......................x........x....:....x:x........:..:..x.....x.....x.....:....................x........x..:..............:....................:...........x........................................--..xx...x...:..--......x...------x.x............x......:x..:.......................x......:.x.....:..x........x.....:.....:..:.....:..:.....x......xx:.---.x......---------------------------------------..x.....x.....:...........---------..:..:.....:x.......:......:. 364M55D11M5D270M2I14M2D10M6D118M3D8M39D26M9D29M 742/850 87.3% 852/94230402 0.0% 121/850 14.2% 19803384 NA +3165 chr4 + 190214555 44454597 44454596 44454680 84 TTCATTACATGCCAGAAGGCAGAGGGAAGAGAGAAGGGGAGGACAGGGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAAGCAT chr4 - 94230402 17831014 17831013 17831096 76399307 76399306 76399389 83 TTCATTAAAGAGTAGA-GGCAAAAGAAAAAAAGCAGATGGAATCAATGGGAGGGCAGGAGAAAGAGAGAGAGATGAAGGAATAT .......x.x:x:...-....:.:.:..:.:..x..:x.:::x..:x.......x:.....:...........x::..:.::.. 16M1D67M 55/83 66.3% 83/94230402 0.0% 1/83 1.2% 26623583 NA +3379 chr4 + 190214555 44454597 44454596 44454680 84 TTCATTACATGCCAGAAGGCAGAGGGAAGAGAGAAGGGGAGGACAGGGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAAGCAT chr4 - 94230402 17835834 17835833 17835916 76394487 76394486 76394569 83 TTCATTAAAGAGCAGA-GGCAAAAGAAAAAAAGGAGATGGAATCAATGGGAGGGCAGGAGAAAGAGAGAGAGATGAAGGAATAT .......x.x:x....-....:.:.:..:.:..:..:x.:::x..:x.......x:.....:...........x::..:.::.. 16M1D67M 56/83 67.5% 83/94230402 0.0% 1/83 1.2% 26618763 NA +3090 chr4 + 190214555 44464648 44464647 44464703 56 AAAATAAGGAAGGGCTGCATTTCCTCATGAGTGTGTGTGTGTGTGTGTGTATGTGT chr4 - 94230402 63396140 63396139 63396195 30834208 30834207 30834263 56 AAAAGAAGACAGAACTGCATTACCTCCTGTGTGTGTGTGTGTATATATATATATAT ....x...:x..::.......x....x..x............:.:.:.:...:.:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -18931492 -75298910 +3005 chr4 + 190214555 44464675 44464674 44464726 52 TGAGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTTATA chr4 - 94230402 27486721 27486720 27486772 66743631 66743630 66743682 52 TGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATA ...x..................:x..x...x....:x:...:.x.:...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 16977954 NA +15571 chr4 + 190214555 44490371 44490370 44490864 494 AGAAATG--ATTTACTTCTTTCATAAGCCTATGGCCTGAAGCAAAGGAATATCATTATT-TGGGTCAA--GTGTCCTATA---TTGCCACAACCTCTATTCTT-----GAATATTTCA---------CAGTTCATTATACTCCATAGACATATCATG--GGGATTTATCTCAATCACATTACAGAAACATTCAA-TGACTGGAAATGATTCACTTTTCAAA-GATCCATTGGTCACATTACTTGGCTTTAATAGAAATATACAATTATGGTTGATAATGCCGTCTTACACCCCATGATCCAGATTTTCAATCTGACACCCTTTGGTGTTTATCTTTGCCATCATCCAGAAGCAGCATCTAATGCCAAGCCTGATCATGCAGAGAACATAAATTTAAAGAGCCATTT-CATTTATAACAAACAGACCCAGCTGG-AGCACAGCTGCTAAATGGAACGGCAAAG-TAAAATTTCCTGCTACCTGGGAAGGTCTAATTATAAAACCACCTAAACAAGCTTTCGAAA chr4 - 94230402 24656089 24656088 24656596 69573807 69573806 69574314 508 AGAAATGCAATTTATTTTTTTCTTCAA---ATG------AGCAGTGAAATGTTCTCACCATGGGTCAACAGTGTCCCATTGTTTTGTTATCACCTGCATGCTTTAGGCAAATATTTCATCTCATATTCAATT-GCTATACTGTATGGGCTTGTTATACAGAGAGTTGTCTGAGTTAGGTTACATTTATATTCAAATGACAAGTCATGATTCATTTTTTAAAAGATCCTTTGATAGCACTAAATAGCCTGATTAGAAATATATCATTATGGTACATTATGTCAACCAAATCTTTATGAGGCAG-----CATTCAGACTGCCTTTAATGTTTATCTCTAGTGACGTCCAGAAACGGAGACTGAAGCCAAGCATAGTCATGCTGAGAATGGAAATTTGAGGAGTCTTTTTCATTTACAATAAACACACCCAGCTGGGAGCACAGCTGCTAACTAGGGAGCCAAAGCTCTAGCTTCCTACTACCTGGGAGGGTCTAATTACAAAACCACCTAGGCTACCTCTCAAAA .......--.....:..:....x.x.:---...------....:x.:...:.:x.:.::-........--......:..x---...::.:x....x:..x...-----:.........---------..:..-::......x:..:.:.x.:.:..:--.:..x..:...x.:.:.x:.....xxx.:......-....x:.xx........:....:...-.....x...:.x:..:..xx.:..:.x.x..........:x........xx..x...:.:x.:x.xx.:::....xx...-----..x..x...xx.....::.........:.:x::x.:.......:.:.x:x..:.x.......x.::......x.....::x......:.:...:.x...-......:..:.....x..........-..............x.:.::x.x.....-.xx.::.....:..........:..........:...........::.x.x..:..:... 7M2I18M3D3M6D20M1I8M2I10M3I20M5I10M9I5M1D24M2I35M1I26M1I80M5D99M1I26M1I28M1I60M 345/479 72.0% 508/94230402 0.0% 44/479 9.2% 19834282 NA +3045 chr4 + 190214555 44494074 44494073 44494135 62 TTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAAAAAAAAAGA chr4 - 94230402 33772619 33772618 33772680 60457723 60457722 60457784 62 TTAAAAAAAAATTAAAAAGTGAAAAATATCAGAGACCTAGAAAGGGAAAAAAAAAAAAAAAA ..:........xx.....:x:.....x.xx.....xxx......::..............:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 10721455 NA +3000 chr4 + 190214555 44494086 44494085 44494126 41 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............:.:...........:....x..x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -43182261 -51048141 +3000 chr4 + 190214555 44494088 44494087 44494128 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............:...........:...:..x..x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -43182259 -51048143 +3000 chr4 + 190214555 44494090 44494089 44494130 41 AAAAAAAAAAAAAAAGAGAGAGAGAAAGAAAAAAAAAAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA .........................:...:.:..x..x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -43182257 -51048145 +3018 chr4 + 190214555 44504081 44504080 44504142 62 CATTATTTCGTATTGGAAATAATTATTGAAACAGAACAGCATTATTTCATATTTCAAATATG chr4 - 94230402 35032734 35032733 35032795 59197608 59197607 59197669 62 CATTTTTACATATGGTAAATGACTTTTAAAAAATAATAGCATAATTTCAGATGTCAAATATG ....x..x.:...x.x....:.:.x..:...x.x..:.....x......x..x......... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 9471347 NA +3166 chr4 + 190214555 44535752 44535751 44535805 54 CATTTGCTTCTTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT chr4 - 94230402 77066143 77066142 77066196 17164207 17164206 17164260 54 CATTTACTTCACTCCTTCTTTTTAATTTCTTTTTCTTTTTTCTTTTTACTATAT .....:....x:...........xx...:.....:......:.....x:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -32530391 -61700011 +3221 chr4 + 190214555 44556751 44556750 44556803 53 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...:.......::.......x.....:...x::.............:x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 24852474 NA +3287 chr4 + 190214555 44556752 44556751 44556833 82 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTTTC chr4 - 94230402 19704280 19704279 19704358 74526045 74526044 74526123 79 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA---ATATTTTC ...:.......::.......x.....:...x::..............x..x.xx:.:.x.x.xx..x..:.---:....... 71M3D8M 58/79 73.4% 79/94230402 0.0% 3/79 3.8% 24852472 NA +3039 chr4 + 190214555 44556755 44556754 44556805 51 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x.:......:.:........:....x.x........:....... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -3532742 -90697660 +3039 chr4 + 190214555 44556757 44556756 44556807 51 TATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x.:......:::........:....x.x................ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -3532740 -90697662 +3196 chr4 + 190214555 44556761 44556760 44556835 75 TATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTTTCTT chr4 - 94230402 57691394 57691393 57691468 36538935 36538934 36539009 75 TAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ..x:.::...:...:x.......:..:x.........::..x....:x.:.x.....x.xx..x..:.....:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -13134633 -81095769 +3048 chr4 + 190214555 44556779 44556778 44556878 100 TGTGTGTGTGTGTGTGTGTGTATATATATATGTATATATATATATATGTATTTTCTTTTTAATTCACTAAAACCCAAACATAAT------TACCTTTAATGAGGTA chr4 - 94230402 89821282 89821281 89821387 4409016 4409015 4409121 106 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGACAACAAAAATAGCAACATAATCTCTCCTGCCTTCAAGGCAGCA .........x.x...................:...:..:.xx:x:.xx:x:...xx:....:x:x..x....:xxx........------.:....:..x.x:.:. 84M6I16M 67/100 67.0% 106/94230402 0.0% 6/100 6.0% -45264503 -48965899 +3995 chr4 + 190214555 44592987 44592986 44593094 108 TATACATTCAGATACATATACATATATACGAATGTGTCTGTATATATATGAATATATGTCTGTATGTGTGTGTATATATATGTATACACACACAGACACATATAAATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:...x..x..x....:.......:..::.x.::.xx...:...::.:x.x:..:::xx....:....x...:.....x:..::.x....x.......:..:x... 108M 70/108 64.8% 108/94230402 0.0% 0/108 0.0% -28528115 -65702287 +3339 chr4 + 190214555 44593012 44593011 44593094 83 ATACGAATGTGTCTGTATATATATGAATATATGTCTGTATGTGTGTGTATATATATGTATACACACACAGACACATATAAATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::.x:.:...x..:...x.:...x..x..::.x......:x.:::.xx...:.:::.:...............x..:.... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 36197224 NA +10024 chr4 + 190214555 44622267 44622266 44622596 330 CCACCCTTAAGTGCTGCTTTGTCTCTCTGCTTATTACTCTCTCAAAAGCAA-TAAAACAGAAATCATATCACCAAATTT-------GAATGTTAATATATTTCC----------AAAATAA---------------TCTGGACAGCAAACAGAGTC---TTGAAAT---GCCATC-TCAAACATTCTTTAGAAAATTGTTAGGAGGGCAAAAAGTCCATAAAGTATGGCACAAGGGTAGGCAACAAGAAGCTGCTGTCCTTCCATGTGCAAGGCTGCAATGAAGATCTTGGAAGCTGAGAGACTACACCAGCCAATGATGACCAGGGATGACATGATTCCAAAGATGCCCCTGCAGCAAAGACAAAGAAA chr4 - 94230402 24685394 24685393 24685762 69544641 69544640 69545009 369 CTGCCTTTTAGT-TTGCTTTTTTTTTTATTTTATTATCAGCCATTAAGCAAATAAAAGGTAAGTTGTGTAATCTAATTTTGTTAATGGAATTTAATGCAATTCTGCACAATCTAAAAATAAGTGAATAACCTCCTATCCCTCCAACAAACATAAACAGGTTGTAATAAGGCTACCAGGAAATATGTTTCAGAAAACTGCCAGAAGTGCAAAGAGTCCATACAGCAAAGCACACGGGTATGCAATAAGAAGCTGCTGTCCTTCCATGGCCAAGGCAGAGGTAAAAATTTTGGAGGCTGATAAGCTGCACCATCCAATAACAAACAGAGCTAACAAAGTTCCCAGGATCCCACTACAAGAAAAACAAAAGAA .::..:..x...-:......x.:.:.:xx:......::xx.:xxx......-.....x:x..:.::.:.x.:.x.....-------.:.xx.....::.x...:----------.......---------------..:xxx..:......x.:x.---...x...---..:.:.-xx...:..x:..:......:..::..:..x.....:........x..:.x:.....x.....x....:......................xx......x.x::.:..:..:.....:.....x.::..:.....x.....:.::.x...:.x.:...x::....x.:...x..x..:..:x...:.....::.. 12M1D38M1I27M7I18M10I7M15I20M3I7M3I6M1I194M 227/329 69.0% 369/94230402 0.0% 41/329 12.5% 19936873 NA +3554 chr4 + 190214555 44624009 44624008 44624071 63 ACATTGAAAAATCTGACAACTTAAAAAGTGCCAGTTTTTTTTTCTCTCTCTCTTTTTTTTTTT chr4 - 94230402 64706149 64706148 64706210 29524193 29524192 29524254 62 ATACGGAGAATTCTGA-AACTGAAAAAGCTCCATTTTTTTCTTCTCTCTCTCTCTTTTTTTTT .:.:x..:..x.....-....x......:x...x......:............:......... 16M1D46M 51/62 82.3% 62/94230402 0.0% 1/62 1.6% -20082140 -74148262 +3018 chr4 + 190214555 44624040 44624039 44624080 41 CAGTTTTTTTTTCTCTCTCTCTTTTTTTTTTTTTTTTTATT chr4 - 94230402 47552690 47552689 47552730 46677673 46677672 46677713 41 CAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTACT ....x..x:.:............................:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -2928650 -91301752 +3105 chr4 + 190214555 44624045 44624044 44624100 56 TTTTTTTCTCTCTCTCTTTTTTTTTTTTTTTTTATTTTGAGGTGGAGTTTCACTCT chr4 - 94230402 70081460 70081459 70081515 24148888 24148887 24148943 56 TTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCT .............................::...xxx.:...:xx.x.x.:..... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -25457415 -68772987 +11537 chr4 + 190214555 44624595 44624594 44624806 212 ACTTACTGCAGTGAAAAGAACATGGCGCAACCAGACAGGATGACCATGGGGAGCAGGCAGTAACCCAGCACGCTGGCCACACAGCCGTACGACACCCCTGAAGAGCTCATCAGGTTCAGCAAGGCATGAATCACAAGGCAGCCAATGGCACTCATGCCATACACATAACCAAACTGAACTTTTCCTGCCTGAAACGACGTGAAGAAAAAACA chr4 - 94230402 24689701 24689700 24689903 69540500 69540499 69540702 203 ACTTACTGTAGTGAGAAGATGGCTGCAGAAGAGGACAGGATCACCATGGGCAGCAGGCAGTAGCCCAAAACACTTGCAACACAGCCATGTGAGACTCCTGGGATGCTCATCAGGTTCAGCAGGGCATGCATAGAGAGGCACCCAGCGACACTCACACCATACACATAGCCAAAGTGAACTTTTCCTGCCTG---------GAAAAAAAAACA ........:.....:....xx::x..:x..xx:........x........x...........:....:x..:..x..x........:.::..x..:....:::x.................:......x..x:x:.....x...::.:......::...........:.....x.................---------...:........ 191M9D12M 159/203 78.3% 203/94230402 0.0% 9/203 4.4% 19934894 NA +10695 chr4 + 190214555 44629386 44629385 44629561 176 TTCCTGTGACACATTACCAGAAGCAAGGTGGCTCCCAGGGCTACGCAAAAAAGAATGGGTCCAGTGAGGTCCGTTTCATTCATAATGCTGCCATCTACTGGCTTCATTGGGTTTAACACTGTCAAAGTTTTTTGCCATATGTGATCAAAATGGATTCCAAGTTCTGTAAAAAGGAA chr4 - 94230402 24694332 24694331 24694507 69535896 69535895 69536071 176 TTCCTAGCATAACCTACCAGCAGCAATGTTGCGCCAAGGGCCAAACAGAAAACCACAGGTCCAGTGAGGTCCGTCTCGTTCATAATGCTGCCATCTGCAGGTTTCATTGGATTTAGAACTGTTAAAGTTTTTTGCCATATGTGCTCAAAATTGATCCCAAGTTCTGCAATGAGAAA .....:xx.:.xx:......x.....x..x..x..x.....:.x:..:....xx.::.................:..:..................:.x..:........:....:x.....:....................x.......x...:..........:..x:..:.. 176M 140/176 79.5% 176/94230402 0.0% 0/176 0.0% 19935054 NA +6546 chr4 + 190214555 44632166 44632165 44632344 179 ATTTATTATAAGGTATGTGAGT--GATTATAAC-------TATTAATTGTAGATACTCTAATATAACATCTTATTGTACAAAATAAA---AGAAGATAAAACTGCTGTGAAATTTTAATGCAAAATTTATTGTTTTGCTGTCATCTAGTGGTAGTAAAGTATATGATACATATGCTATAAAAGTGAATTAA chr4 - 94230402 24695793 24695792 24695974 69534429 69534428 69534610 182 ATTTATTACTAGATAAGCAAATAAGATTATTATCAATGTTTATTAATTAAAGATATTCCAGTATG---------CATACAGTATAAACACGGAGCAGAAAAATATTTGGAAATATGAATGTAAAACTTATTGTTTTGCTGTCATCTAGTGGTAGTAAAGCATATGCCATATACAACGTAAGAATTAATGAA ........:x..:..x.::.:.--......x.:-------........:x.....:..:.:...:---------::....:x.....---:..:x.x....x.::.xx.....x.x....:....:.................................:.....x:.:...::x::...:.:.x...x.. 22M2I9M7I25M9D13M3I101M 125/170 73.5% 182/94230402 0.0% 21/170 12.4% 19936373 NA +5920 chr4 + 190214555 44635918 44635917 44636097 180 TTATCTTCTAGCAAAGGAGGCTCTTCATCAAAACTGTCAATGTAAGGAGATTGTGAATAATAATCTGAGTTGGA------TGCTGGCTGAAAAAATTGTCCTGCGTAACCC---GATGACATGAGCATCTCTGATGGAACAAAGGAGGCAGGCTGAGGCTGCTCACCAGCTTGTTGTCTAGAAAAAGAA chr4 - 94230402 24696153 24696152 24696341 69534062 69534061 69534250 189 TTACCTTCTAGCAAAGGAGGTTCCTCATCAAAACCATCAGCATAGCTAAGGTGAGAGAGAGTGTTGGAACTGTATGGAACTGTTGGCTGTAAAATCTGACCTGTGTAACTCTGAGATGGCGACAGCATTTCTGAGGGGACAAAAGCACCAGCCAGAGGTCTGTCTCCTATCTGGCTCCTGGGACAAGAA ...:................:..:..........::...:::..:xx.::x..x..:x:.xx:.:x..::..x.------..:......x....x:..x....:.....:.---....:.:xx.....:.....x..:.....:.x:x...x.x....::xx..x..x:::..x:x:..:.:.x..... 74M6I31M3I75M 118/180 65.6% 189/94230402 0.0% 9/180 5.0% 19939765 NA +3636 chr4 + 190214555 44644231 44644230 44644312 82 GCTTTAACACAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAATAGAAGAATTGTGTAGGGCCACACATAAAA chr4 - 94230402 9885848 9885847 9885929 84344474 84344473 84344555 82 GCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ....x..:x....:x.:.....:...:..x........:......x..::x:x.x.:.....::x......::..:x...:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 34758383 NA +7295 chr4 + 190214555 44680427 44680426 44680555 129 TTTCCCCTTTCTAGGAAAAACTTGACATGTCTAGGTTTCCTGTTGAAAATATTAGAAATTTCAGTATTGTTGCACACGTGGATCATGGCAAAAGTACTTTAGCTGACAGGCTCCTAGAACTTACAGGTA chr4 - 94230402 24719276 24719275 24719404 69510999 69510998 69511127 129 TTTCTCTTTTTCAGGAAAAAATAGATATGTCAGCATATCCTGTTGAAAGCATAAGAAACTTTAGTATTATAGCTCATGTAGATCATGGCAAAAGTACACTAGCAGACAGATTGCTGGAAATTACAGGTA ....:.:...::........x.x..:.....x:x:.x...........::..x.....:..:......:.x..x..:..:.................x:....x.....::.x..:...x......... 129M 99/129 76.7% 129/94230402 0.0% 0/129 0.0% 19961151 NA +14569 chr4 + 190214555 44680678 44680677 44681221 544 GTGTTTCTGTTTATAGGGACAATTGATAAAACAAAGAATAATAAGCAGGTTCTTGATAAATTGCAAGTGGAACGAGAAAGAGGAATCACTGTTAAAGCACAGACAGCATCTCTCTTTTACAATTGTGAAGGAAAGCAGTACCTTTTAAATCTCATTGATACACCGGTAAGTTTAATATTAATTTTGCATGTATTGTTAAAGTCAACATTGTGTCAGTAGTGCAAACAGATCCTTGTTTAATTTTTGAA-----CTGAG---TATTAAACATCTGCCTTTGCTT--TTTGTTTTCTCAGTGTTCTTATGTTAGTGTCAGT--TGTTTCAAAAGTGCAGGCTACAAAAAAGAAACGAATATTTAACAGCTTTTATCAAGTAAAGTCAATAAATTTGCCATAATGC-----TCTTTCCTAAAAAATTAACTCACATTTACAGGTATCAATATT--TTTGTTTCTCAGGGCCATGTTGATTTTAGTTATGAAGTATCCAGGTCACTTTCTGCTTGCCAGGGTGTTTTACTTGTGGTTGATGCAAATGAGGTAGGTATTTTTCATTTT chr4 - 94230402 24720845 24720844 24721342 69509061 69509060 69509558 498 GTTTTTTTGATCTTAGGAACAATTGCTAAAACTGACCGTAACAAACAAGTGCTGGATAAACTGCAAGTGGAACGTGAAAGGGGAATTACAGTTAAAGCACAATCTGCATCTCTCTTTTACAATTACAAAGGAGTAAACTACCTCTTAAATCTTATTGACACACCAGTAAGTGAAGTA-------------------CAAAG--GGCATT---TCAGTCACGTAAAGCTGTATGTCTTTATTTTTAGAAATCTGCTAAGTCCTATTTATGATTTGTGTTTATTCAATATGTTCTTTCCTTTTATTTATTTTGGTAAGAATTCTGTTTTGTATG------------------AACAAATAT---ACAG-------------------ACAAAACCATGATAATGTAGATATCTTTGCAAAGGACTCCAGAAATATGTGGAATTATGAATACTAATTTTCTCTGCAGGGCCACGTTGATTTCAACTATGAAGTTTCGCGGTCACTATCTGCCTGCCAAGGTGTCCTACTTGTAGTAGATGCAAATGAGGTGCG-GTTCTTAATTTT ..x...:..x.:x....:.......x......x:.xx:...:..:..:..x..x......:.............x.....:.....:..x...........:x.x...................:::.....:x:x.x.....:........:.....:.....:......xx.:..-------------------:....--::....---.....x::.:...xxx:.x:x.x....x....x...-----..:..---....x.xx..:..:x...::.:--.x....:.:..xx.x.x:....x..:..:xx.:.--.....::x.x.------------------...:.....---....-------------------.:...x::::x......:-----.....x.x..::.x.:x.xxx.:..x.:x.:x...x....:.--...x:.::x........:........:.::........x..xx.......x.....:.....:.....::.......:..x..............:x.-:..:..x..... 177M19D5M2D6M3D36M5I5M3I22M2I34M2I11M18D9M3D4M19D18M5I42M2I98M1D12M 343/479 71.6% 498/94230402 0.0% 84/479 17.5% 19959833 NA +5744 chr4 + 190214555 44682327 44682326 44682443 117 TTTTCAGGGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTATCGGTAATTCCAGTTATAAATAAGGTAATTACAATGAGACAACAGTGTTGCTATTT chr4 - 94230402 24722075 24722074 24722185 69508218 69508217 69508328 111 TTTCTAGGGTATTCAGGCTCAGACAGTGGCAAACTTCTATCTTGCTTTTGAAGCACAACTTGCGATAATTCCTGTCATAAACAAGGT------AATGAGGTTGTAGTGTTTCAAATT ...::....x.....:..:..:..x..:..........x......:..:........:..xx..:.......x..:.....:.....------......::x::......x.x.x.. 87M6D24M 85/111 76.6% 111/94230402 0.0% 6/111 5.4% 19960252 NA +6223 chr4 + 190214555 44683220 44683219 44683457 238 TTTTTTTTTTTAAAGATAGATCTGAAGAATGCTGATCCTGAAAGGGTTGAAAACCAAATTGAGAAAGTGTTTGATATTCCAAGTGATGAATGTATTAAGGTAAAATACGTTCCTAAAAAGATTATACTTTGA---AAAAAGTCTCAAGT--AATTGGGCTAAGTGAAATTTCAT--GGTATTTGATAA-----CCTGGCATTATATGCTGTTTTTTATA------GTTTTACAAACTTCTTTTACTATTATTTCCT chr4 - 94230402 24723158 24723157 24723409 69506994 69506993 69507245 252 TTTGTTGTTTTTCAGATTGACTTAAAGAATGCAGACCCTGAAAGAGTTGAAAAACAAATTGAGAAGCTGTTTGATATCCCTGTTAATGAATGTATAAGGGTAAGATCTCTTC----AAGTTTTATAGTGTGACTGATAATATACGAAGTAGAAACAGGTATACAAATCTTTCATTAGCTACATAATAAAACAGCAGGGTGTTGTCTGTCTGTTTTTGTATGATGTATTGTATGAATTTCTTTAGATCTTGTCTCCT ...x..x....xx....x..::.:........x..:........:........x...........:x..........:..x:x.:..........x.:.....:..x:x...----..:xx.....x.x...---.x..x:.x:x....--..x::..:xx.xx:.xx......--.x..:x.:....-----.xx..::..:.x..::xx.....:..------:..x..::..:......x:x.x..:.:.... 112M4D16M3I14M2I23M2I12M5I26M6I31M 161/234 68.8% 252/94230402 0.0% 22/234 9.4% 19960062 NA +4110 chr4 + 190214555 44685953 44685952 44686029 77 TTTTAGATTTCTGCTAAACTTGGAACAAATGTTGAGAGTGTTCTTCAGGCAATTATTGAAAGAATCCCCCCGTGAGT chr4 - 94230402 24723717 24723716 24723793 69506610 69506609 69506686 77 TTTTAGATTTCTGCTAAACAAGGGACAAATATTGATAAAGTTCTTGAAAAGGTCATTGAGAAGATTCCACCGTAAGT ...................xx..:......:....x.:x......x.::x::.:.....:.::..:..x....:... 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 19962236 NA +10865 chr4 + 190214555 44686530 44686529 44686721 192 ATCCTCTGAGAGCTTTGGTATTTGACTCCACCTTTGACCAGTATAGAGGTGTGATAGCCAATGTAGCATTATTTGACGGAGTGGTTTCCAAAGGAGATAAAATTGTATCTGCACATACTCAAAAGACATACGAAGTTAATGAAGTAGGAGTCTTGAATCCTAATGAGCAGCCAACTCATAAATTGTAAGTAA chr4 - 94230402 24724286 24724285 24724477 69505926 69505925 69506117 192 ATCCCTTGAAAGCCTTAGTATTCGACTCTACCTTCGACCACTACCGAGGTGTCGTAGCTAACGTTGCAGTTTTTGGTGGGGAGATTCAGAAAGGGCATAGAATTGTCTCTGCGCATACAAATAAAAGATATGAAGTTAATGAAGTAGGAATTCTGACTCCGAATGAACAGCCAACACATAAACTGTAAGTAA ....::...:...:..:.....:.....:.....:.....x..:x.......x:....:..:..x...x.x....::..:.x.:..:xx.....:x...:......x.....:.....xx.x..:.x...:..................:.::...x...x.....:........x......:......... 192M 147/192 76.6% 192/94230402 0.0% 0/192 0.0% 19962244 NA +17849 chr4 + 190214555 44687974 44687973 44689978 2005 CAGTAAATATTTGCATA-TAATAATTTTATTTAGATATGCAGGACAGGTGGGCTATCTGATTGCTGGGATGAAAGATGTCACTGAAGCGCAAATAGGAGATACATTATGTTTACATAAGCAACCAGTGGAGCCCTTGCCTGGGTTTAAATCAGCGAAACCAATGGTATTTGCAGGTGAGGAGTTCACAAATTCAAAGGTTGAGGGCCATGATATTTTTAAACTAAAAGT-------CTGTCTCAGTGGTTAAGGAAAAAATACACATTCTGGTTATTTTAAATAACCACTAATTCCAGCATATTGTTTCACTTTGTGCTGTTTATCAGTTTATAATTACATATGTGTGATGAAATTATATGTGGGAGATCATT-TAGGATGTGTTAAGAAATAAGTTCTTGAGGAAGAAGCTGTGATATATAGGATACAGTAATATAAATTTCTTTCTTATTTTTCTAGGGAGTTCA--TTATTATATTTGAAA----------CATTTTTCTAATTAGGATGTTCTTATTAGTAATTATCAGTAGACACTGACTGAGTGCCTTCATCTT------CGATAGACTTTCTTTAATATTGTACTGTACTAATG--TAGATATGACAGAATGGTGTTGCCTCAAGTACGTATAATTTCAGAATCTTTTACTTCATTTACTTTGGAAAAAGGAAGACCT--GATTGAAGGTCATCAGGTTACTC----------TGTGCT----GAGTATCTAGCCCTTAATTTTTGCCCTACAGTCTCTCTCACTGGGAATT----AGGAACTTTGTTTACCCCTACCTTTAGGCAAAGTCAGTCATGTGGATTTTAGAGGACTTCAGAGGTGTCAGATGAAAGAGAATCAGTAGTGATTCCCATAGTTTTTGTCAGTA-AATAC--CAAAAAGCAAAATTTAACTATGGTTTTAAGTAGATAATCTGCCTTAGAGAATTGAGAGTGCAGTATAGTTTTCATGTCTACTTCTATTTTTATCCAATAATAAAGTTTCATTTGGGTTGTGGAATGTCTTGTGCTTTTGTTTT------TGAA-----ATTACACTG-TGTTTTCTTAATAGGCCTAATTCCCATGTTTTTTTTTTTCTTTTCCCTG--------------------------TATTTTTTCAAAAACATTAAAAA-----------------------CATTAT--TTGGAGTGCAAA--TCTAGTTGT-----ATATTCTTTCAGACTAATGACTTGTAAGATACTTTGAAACCAAATAA-----TCATTCATTTTTAGCAAACCAATATTTTGGT--CAATAAAATACAAGAAAGTAATTTAAAAGGTAAATGACTAATTTGGAACTTGGCAGCACTACACATGTGGTTTGATAGGTCTGTAGGCAGCTTATCACGTGATAATTAGAAATCATTGTATCCC---------CAGGAATGTATCCTCTAGACCAATCTGAATATAACAATCTGAAGAGTGCTATAGAAAAACTGACTTTAAATGATTCCAGTGTGACCGTTCATCGGGATAGTAGCCTTGCTCTGGGTGCTGGCTGGAGGTAAGATTCATTCACATGTGTTTTATAGGAAAGGGAGGTGTAAATGGTGTATTTTAA---AAATATTTTTA----TAGGAAAGGGAGGTTTTTAAAAAATATCTTTATAAGTAAGGGAGGTATAAAATGGTGCATTGTTCTGGAACATTTACTGAAAATAAGTTTATATTAGTGTAAAGTGAACGAAAACAATTTTTATCTGCCTGTTTCACGTTGCGGATTGACATTTTATGGGTAAGTTTTATAGTGATTTAAAATAGATTCCCAATGGAAGATTTTAATCTTATTTAATAAAATTATGCTAGCATTTAATTATATTGTGAAT-TGTTTGAATGACTTAATTCCATCCCTCCCTTAAAGTAACAATATGTTCATTAAAAAAAAAAAAAATGAAGCCCATGGGACATAAACATTTTGGAGTTTGTCTTTTCCTCCCCCAGGCTAGGATTTCTTGGACTTTTGCACATGGAAGTTTTCAACCAGCGACTGGAGCAAGAATATAATGCTTCTGTTATTTTAACAACCCCTACTGTTCCATATAAAGCTGTACTGTCATCATCAAAATTGATAAAGGTA chr4 - 94230402 24725960 24725959 24727794 69502609 69502608 69504443 1835 CAAGAAGTGTCTGTGTAATACTGATTCTATTCAGATATGCTGGACAGGTGGGCTACCTGATTGCTGGAATGAAAGAAGTAACAGAAGCCCAAATAGGAGACACGCTGTTCATGTATAAACAGCCGGTGGAACCTTTGCCTGGCTTTAAGTCAGCAAAGCCAATGGTTTTTGCAGGTGAGGAGAAAACCAACTAAAAGG----GAATCACTTTTTTCCAGTAGCACAAGTAGGAGAACTATTAGAGCTTCTAATATGTATTTAAGAATTGTGAGGATTAGAATT--TCACTAAAATTAAGCTACAGAGGCAC---ATGCCATTTA------TATAGCTCTTTATG---------ACTCAGCAGGCAAGATTGTTGCAGGCTGTTTTTAG--ATGA---CTGCAAGACTAAGGTGT-ATTTCTAG---CCATTAATAC--------------TCCTTCTAGTGCCTTTAACTCTTTGTATCTGGAAAAGAAGGAGTAATACTTTTAAAAATGAAGTCCTTTTTCTTTTTTCT-------------TTGAAT-TCTTCATCTTGATGACCAATAA--TTTTTGTAGT---------TATTAATGATTGGTTCTGTTAGACTGTTGCTGCCAC-----------CTTTAGTAAAC---TACTACACATGCTATGGAA----GACGGCTTTAGAAAGAAAGAAGTTCTGTTACTCACTTCCTAGATTTGTTTTGAGAGTACTT---TCTTAATCTGTGTCATGGATATTATTCCGCTAGTGAGTGTAGAAGGGAAAAGTGTAATCCT-------------GTAAGCAATGTGGATTTT------TTTTATGCGTGC-------------ATGTGTGTTGCTTCCTGTACTTTATATGAGCACAATGATGTGAAAAGTGGAACCTA-------TTTCAAGTAGTAATTATAC---AGACAACT---------GTTTTTTATTCATTT---CTTCTATTTGT-----TTAAAAAAATTACA--GAAATATTAGCAACTTTAGCACTTCTTTTTCTTCCCATGAAGGAGCATCTCAGTGATGTCTGCTTATTTA--TTAATGCTTAAGTTATAAGCCTACACTGTACAGCAAAAAAAAAAAAACAACTAATATACTGATCTTCCACAGCTATGAAAAAGTAGATGAGTACAGTATGCCTACTATTATGGTCTGAATGTTAATTTCTGGTTTTTTTTATTATTATTTCATGTTACC--TTAATAAGATTTTAGGGGAAAAAAAAAACCTGTTTTTCAGATTGAAAGAGTCAAATTTCTAGTTGTAACAGAAAGCAAGA----TATTTCTGGTCTTTATTA-----TTGTTACTGCTTATTACTGCTCATATTAT---AAAGGTAAGTATATAGTAGATCAAGCTCCATCACAGAATCTCTGTGTAATATGTTTTGACAGGAATGTATCCTGTAGATCAAACAGAATATAATAATCTTAAAAGTGCTTTGGAAAGGCTGACATTGAACGATTCCAGTGTGACTGTTCATCGTGACAGTAGCCTTGCTTTAGGAGCTGGATGGAGGTGAGGCT--TTTATACCATTTTCATA-----------TGTCAATTGAAAATTTTAATTGAAATAATTTCAAGATTAGGA-------GCTTTAATTCAGTTTAATGATAGGTAA---AGGTGAAAAGTATTTTATTTTCTT-----------------TTGTTCTCTATTCACATAGATT------ATGCAATTT-----------------GTTGT-GATTGATAATTTTTGG----CTTTTA----GACTTCCATTGAGTCTTTAA--GAGGTTCTTTGCTGTGTCTGATAATGCCAGACTAGC----------AGTGTAAACATGCTGGAGTGAC-----------------------CAACAAATATTTGACT--------------------------GACATGA-------------TTTTTTTTTTTTCCACAGGTTGGGTTTTCTTGGTCTTTTGCATATGGAAGTTTTTAATCAACGTTTGGAACAAGAATATAACACATCTGTTATTTTGACTGCACCTACTGTTCCATATAAAGCTGTTCTTTCCTCAGCAAAGTTGATAAAGGTA ..:x..:.:.:..::..-..x.:...:....:........x..............:...........:........x..x..x.....x...........:..::.:.x:x.::....:..:..:.....:..:........x.....:.....:..:........x...............xxx..x..:.x.....----.:::..:xx.x..::x:x.x:.x....-------..:.:xx..:xx:...x:x:x.xx..x:x...x..:xx...xx..x.--:......xx::.:xx..:x.xxx...---:...::....------....::.x:x....---------.:.xx:::x.x:....::..-:...x...x..x..--..:.---..xx.:..xx...x...-..x.x...---x..x.....:--------------.::......x.xx..:.--.:x..:...:..:..----------x..x:..:...xx.x..x..:...x..xx.xx..x.-------------:...:.-:.........------.:...:--...:.x..:.---------..:.....--.:.x.x..x:...x..x..:....x.-----------x...x:x..x.---....x..:x.:..x.....----..x.:.:.--..xx...:.xx:.:xx.......----------.x..:.----.....::.---:......:.x..:.x.:x.xx:.x.::.:..:.x:.x.----.:.::xxxx..x..x:...-------------..x..:x...........------:..:.x:x...:-------------..xx..:x..x....::..x...x.:.x..:.-...:x--::.....:::..::..-------...:......xx.x.x.:.---...x..:.---------..x.xx.x.....x.---.........x.-----x...x...:..x..--x:::.xx.:.x.xx.:.x.::...:.x...:------....-----..:x..x..-...:.x....x.x:--:....x.::.x...x.xxx::.x.x:.x:x.x.--------------------------.:x.:..:..x.:x:..x.....-----------------------:.....--.:x..:..:x..--...:...x.-----x....x.....x::..x:--:.x:......x:.xx.::.xx...x..-----.:x....xx..x.:x:.::...xx..:.:..--:..:.:..x:.....----x....xx::xx.xx..x.-----...xx...xxx:.x:...:.x...:.x:.---.x....xx...x::..:xx....x.:xx:.x:xx::....x:...:.xx:---------..............x....:...x.x........:.....x..:......x.:....::.....x..:..:..............:........x..:............:.:..x.....x.......:..::.--..:.:.:xxx...:...-----------...x...x.x:x.......---.....x...:.----.....-------.:...x.xxx.:.x.xx.x...:....---....:x...:.:x.x:...x.::.-----------------.x:x.:.x....x:::..:.x.------.x:......-----------------....:-......:.x...x...----x.....----..:..xx.x.:::.::::..--..:.x.:..x:::x.:.:.:....x:::.x:.....----------.x...:..:-..:.x..:....-----------------------:.....xxxx..x.:.--------------------------.....:.-------------.x.:....::.:..x....:.:..x........x........:...........:..:..:..x:....:...........::.x...........:..x:.x.......................x..x..x...x....:............ 17M1I180M4D27M7I47M2D26M3D10M6D14M9D20M1I14M2D4M3D17M1D8M3D10M14D17M2I15M10I36M13D6M1D10M6I6M2D10M9D8M2I26M11D11M3D19M4D8M2I23M10I6M4I8M3D38M4I19M13D18M6D12M13D32M1I5M2I16M7D19M3D8M9D15M3D11M5D14M2D31M6I4M5I9M1I14M2D33M26I23M23I6M2I12M2I9M5I18M2D27M5I31M2I15M4D18M5D29M3D50M9I135M2D17M11D19M3I11M4I5M7D27M3D24M17D22M6D9M17D5M1D16M4D6M4D20M2D36M10D9M1I12M23D16M26D7M13D154M 1117/1689 66.1% 1835/94230402 0.0% 462/1689 27.4% 19962014 NA +7950 chr4 + 190214555 44690698 44690697 44690862 165 TGATTTTTCTAATTTTTAGGAACATAGAGAAAAAGAAATTACAATTATCAATCCTGCACAATTCCCCGATAAATCAAAAGTAACAGAATATTTGGAGCCAGTTGTTTTGGGCACTATTATCACACCAGATGAATACACTGGAAAAATAATGATGCTTTGCGAGGT chr4 - 94230402 24729091 24729090 24729253 69501150 69501149 69501312 163 TGGTTTTTTT--TTTTCAGGAGCATGGTAAATCAGAGATTACTATTATCAACCCTGCTCAATTTCCTGATAAACATTCAGTGTCTGAATATTTGGAGCCAACTGTTCTTGGCACTATTATAACACCTCAGGAATATATTGGGAAAATAATTGTTTTGTGTCAGGT ..:.....:.--....:....:...:.x:..xx...:.....x........:.....x.....:..:......:xxxx...:x.x...............::....:.x...........x.....xx.x.....:.:...:........x:.x:.x..:x.... 10M2D153M 122/163 74.8% 163/94230402 0.0% 2/163 1.2% 19961607 NA +8560 chr4 + 190214555 44691593 44691592 44691809 217 TTTAGAGAAATACATCATTCCTCAGTATTTGAGTAGGTTATCATTAAACCCATTTTCTTCCTTCCCTTTTTAGGCTCGAAGAGCAGTTCAGAAGAATATGATATTTATTGATCAAAATAGAGTTATGCTTAAATATCTCTTTCCTTTGAATGAAATTGTGGTAGATTTTTATGACTCTTTGAAATCCCTATCTTCTGGATATGCTAGGTAAAAAAAT chr4 - 94230402 24729609 24729608 24729810 69500593 69500592 69500794 202 TTTATAGAAAA----TATTTTTCATTTTTCAAGGGGA-----ACTGAAACAATTTTTATTTGTC------TAGGATCGTAGGGCAGTCCAGAAAGAAATGTTGTACATTGATGAACATAGGGTTATGCTAAAATACCTTTTCCCACTGAATGAAATCGTGGTGGATTTTTATGATGCTCTTAAGTCCCTGTCTTCTGGCTATGCAAGGTAAATACAT ....x.....x----:...::...x.x..::..x:.:-----.:.:..x.x.....:x.::x..------....x...x..:.....:.....::.x...x.:.x:......x..x....:........x.....:..:..:..x:..........:.....:...........:x..:.x..:.....:........x.....x.......x.x.. 11M4D22M5D22M6D147M 149/202 73.8% 202/94230402 0.0% 15/202 7.4% 19961984 NA +7381 chr4 + 190214555 44694398 44694397 44694566 169 TTTTTTCCTTTTAGTTTTGATTACGAAGATGCAGGCTACCAGACTGCAGAACTTGTAAAAATGGATATTCTACTGAATGGAAATACTGTAGAGGAGCTAGTAACTGTTGTACACAAGTAAGTTCAATAGAAACTA-ATCATGGAATGTGAAAATACTTTTGATATGTTTT chr4 - 94230402 24730272 24730271 24730438 69499965 69499964 69500131 167 TTGCTTTTATTTAGTTTTGATTATGAAGATGCAGGCTACCAGGCAGCAGATCTTATCAAAATGGATATTCTTATAAATGGAAATCCAGTTGAAGAACTGTCAACTATCATACACAAGTAGGTTGGCTGGATTCTCTATTCTGAAGAATTAAAA---CTTAAGTATGTTTT ..x:..::x..............:..................:.x.....x...:.x..............xx.:.........x.x..x..:..:..:x:....:.::..........:...x:x.:..xx..x-..:x..:.:x:.x....---:..x::........ 135M1I17M3D14M 122/166 73.5% 167/94230402 0.0% 4/166 2.4% 19964126 NA +7167 chr4 + 190214555 44695603 44695602 44695754 152 TTTCTGTCTCAGAGACAAAGCTCATTCAATTGGCAAAGCCATATGTGAACGGCTGAAGGATTCTCTTCCTAGGCAACTGTTTGAGATAGCAATTCAAGCTGCTATTGGAAGTAAAATCATTGCAAGAGAAACGTGAGTTGAAATTCATTTTT chr4 - 94230402 24731915 24731914 24732065 69498338 69498337 69498488 151 TTTCTTTTCCAGTGATAAAGCATATGCTACTGGCAAATACCTGTGTGAGCGGTTAAAAGATGCTATACCAAGACAGCTGTTTGAAATAGCCATCCAGGCTGCTATTGGCAAGAAAATAATCGCCAGGGAAACGTAAG-TGAAACTGTTCTTT .....x.::...x..:.....x:..x.x.:.......xx.x.:.....:...:.:..:...x..x.x..x..:..:........:.....x..:..:...........x.:x.....x..:..x..:.......:..-.....:.xx.:... 137M1D14M 111/151 73.5% 151/94230402 0.0% 1/151 0.7% 19963688 NA +4407 chr4 + 190214555 44697395 44697394 44697476 82 TTCTCTTTTACAGTGTGAAAGCCTATAGGAAAAACGTTTTGGCAAAATGTGTATGTATCTAGTTGTATTTATTCTACTTTAT chr4 - 94230402 24732987 24732986 24733063 69497340 69497339 69497416 77 TTCTATTTTACAGATTGAAAGCTTACAGGAAAAATGTTGTGGCAAAATGTGTATGTATTT-----TTTTTATTCCAATACAT ....x........xx.......:..:........:...x...................:.-----.x.......:.x.x:.. 60M5D17M 64/77 83.1% 77/94230402 0.0% 5/77 6.5% 19964408 NA +8515 chr4 + 190214555 44698529 44698528 44698687 159 TAAAATATTTTTC--------AGTATGGTGGTGATATTACCCGAAAAATGAAGCTTTTGAAGAGACAAGCAGAAGGGAAAAAAAAGCTGAGGAAAATTGGCAACGTTGAAGTTCCAAAAGATGCTTTTATAAAAGTTCTGAAAACACAATCTTCTAAATAA-TTGGTG chr4 - 94230402 24734028 24734027 24734195 69496208 69496207 69496375 168 TAAAATGTTTTTCCTTTTCATAGTATGGTGGAGACATTACAAGAAGAATGAAGCTTTTAAAAAGACAAGCAGAAGGGAAGAAGCTGATGAGAAAAATTGGCAATGTGGAAGTACCAAGAGATGCCTTCATACGTGTTTTAAAGAGACAGCCTGAGAAATAAGTTAGTG ......:......--------..........x..:.....xx...:............:..:.................:..:xx.x....:...........:..x.....x....:......:..:...x:x...:.:..:.x...::..xxx......-..:... 13M8I140M1I6M 126/159 79.2% 168/94230402 0.0% 9/159 5.7% 19964501 NA +8698 chr4 + 190214555 44702443 44702442 44703194 752 AAAAAGTGCTATAGAAGA----------AGGTGCACAAAAAACATGCACTTACACATACTTTCCAAAAGGATGTAAACTGTACTTTTAGGCACTGTCATCTCTTCAAATTTCCTTTACCAATGATATATAGCACAATTTTTGATGTCTAGATGGTGCTGTAGGAAGATGA--CTAAGGCAACCACGTGCAGAAAAGCA-TGTGTGTGATGCACAGAAAATATAAAGATTGCATTCCAAAAGTGAAGGTCTGCAATGAT----AGTTTGT--TATCTGA--AAGGTTTGGAGTGTCTTGTC-----ATTAAAAAATGAAATATA----CGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTACCTTTAAAATGACTTTTTAAACAGGCAGA--CATTTCTATGCTGTTTTA---TAGGTGGCTATGTGAC-------TTCAGTACTTTATAATAAATAGCCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTAC-----------AAGATATAAATATT----CAAAAT------------------ATGGAATGTTTA-----ACATAGAGACTCGAATGAAAAAATGACAATCTTCAAAATTCCCCATGTT---------TTGTCATATTGCATAGCTGAAAATTCATCTACTACTTAGTAAAAAGTGCT-CTGTTCATTCAAGCTGAATTTTGCTCCAGTC--TCCTTCAGTTTCCATCTTTCATACTGAATAGTGGATCCACAAGTTTATTGTGCACATGCATTAGACCTTAAAGAAAAAAAGCACAGTTCTAGTTGTTTTTATTAATTTTGAACTATCT chr4 - 94230402 24735713 24735712 24736497 69493906 69493905 69494690 785 AAGAAGTGCTATGGCAGACATTTAATGTAAGTAACCAGAGTA-----AGTTATA-ACACTTTCAAGAA-----TTGGGTGCATTTTTAGGCACTGT----TTTTGTATCTTTATTTGCCTGAATTGTACAGCAGGACTTGAGATGCCCAAAAACTGTTTGTATAAGATAAATTTAAGGCAATCAAGTGCAAAAGCTCAGTGTGCATTATGTAAACAGAA-----------CATTTCATAGTAGAAATTGTACAGCTATTACAAGTCCATAGTATTTAACAAAGGCCAAAACCATTCTGCCTAGAAATACAAATGCAAAGTGTAGTTGCACTAATGGAGGC----CACAATTACAGATTATTGGAAATAATCTATCACT--------TCCTCTAACAGGCAGATGCAGTGCATTGCTGTGCTAAAATAAGTG-CTCTGTCCCACCCCCCTCCACCCCTATATAACATGCAGCCTCCCA----------CAGGCTTGTTCTGTTCCATTTAGTTACTGTAACAGCCAGAGGTCTAAGTATTAAAGCAAAATGCACAACACCAAATAGAGATGGAATGTGAATGTACATATATTGGACCTTTTAAAAAAAATACAGTACCTAGGATTTCCCATTTTAAACAGTTTTCAGTATATTGCATAGCAGTGAACTCATCTGCTACCTA----AAACTGTTGCTGTTGACCTACATGCAGTTCCTCTTCAATTCTTCTTTCAGTTT---TCTTTCATACTGTACAGTGGGTCCACGAGTTTATTGTGCACATGCATTAAACCTTGAGGGGAAAGCA-ACAATGCCAGC--TTTACATAATTTTTAAGATACTT ..:.........:.x...----------.:..:xx..:.:x.-----.x...:.-.:......x.:..-----.x::x..:.:.............----.:..xx.x:..:x...:..x:x:x.:..:....x:.:..xx....:.:.:.x:x..:.xxx:x.....:.--:........:..x.....:..:xx..-....::.x...:.x.x.:..-----------....:..x.:xx...:x.x.:..::x..----...:::.--...:.:.--....::x::.x::.::..:.-----..xx...x:::..:.:..----.:.:.x.....x.----.....x.:xx.x:.:x..x::.:.x....:.x:.--------.::.:x..........--..x.x.xx......x:..---..:...-..x...xx.-------.:..x:x..x.....:.x::....xx:..----------.x:...xx....x..xx.:::.:x...-----------:..:.x...:....----......------------------.........xx.-----.:...xx.:x:.xxx.:......xx...:.x:::.::...:.....x..---------.::x:............x.x:..:......:....:..----...x..:.-.....x.:::.x::xx.:..::x..:..:.:--..:........---............x.:.....:.....:......................:.....:.:.::...:x:-...:.x.:..:--...x:..x.x....:.:x..::. 18M10I14M5D7M1D13M5D23M4D70M2I26M1I20M11D28M4I7M2I7M2I20M5I18M4I13M4D34M8D16M2I18M3I6M1D9M7I29M10D27M11I14M4I6M18I12M5I49M9I38M4D8M1I31M2I11M3D67M1D11M2D23M 450/693 64.9% 785/94230402 0.0% 151/693 21.8% 19966730 NA +14532 chr4 + 190214555 44707724 44707723 44707934 211 CAGTCGGCTTTTGAAATTCAGTGCTCACCTTTAAAGTATTTCACAGTTTTAACTCTTAATTCTAAAGTAGCATCTTCATCGCATACAAAAATAGTCCGGGGATGCTGCTGGAAAGCGGAAACAGTCCACATGTGATTGACTCCTTCTTCTATTGCTTTGTACAGGGCAAATGCCTTGTGTGCCCCTGTTATAAGGATCATTACCTGAAAAA chr4 - 94230402 24739819 24739818 24740027 69490376 69490375 69490584 209 CAGGTAACTTCTGA--TTCAGTGCTCACCTTTAAAGTACTTCACAGTTTTGACTCTTAGTTCTAAAGTAGCATCTTCATCACACACGAAGATAGTACGAGGGTGCTGCTGGAAAGCAGAAACTGTCCACATATGATTGACACCTTCTTCAATAGCTTTGTATAATGCAAAAGCTTTATGTGCACCTGTTATAAGAATCATCACCTGCAAAA ...x:::...:...--......................:...........:.......:.....................:..:..:..:.....x..:..:..............:.....x........:........x........x..x........:.:x.....x..:..:.....x...........:.....:.....x.... 14M2D195M 178/209 85.2% 209/94230402 0.0% 2/209 1.0% 19967905 NA +14836 chr4 + 190214555 44710944 44710943 44711147 204 AATGCTTACTTCTCTAGCATCCATCACTGTCCCCACACCAACAGTTAGAGCCATAGTTGGCACTTTTGATAAATCTCCATCAAAATATTTGGCATTTGCCAAGATGGTATCCATTGCTAGAGTCTTTAATCTTGTCCTTGACACTAAACTGGATCCAGGCTCATTGAAAGCGATATGACCATCTGGACCAATTCCTTTCAAAAG chr4 - 94230402 24740104 24740103 24740307 69490096 69490095 69490299 204 AGTTCTTACTTCTCTAGCATCCATCACTGTACCCACACCAACCGTTAGCGCCATAGTTGGTACTTTAGATAAGTCTCCATCAAAGTATTTAGCATTTGCCAAAATGGTGTCCATTGCTAAAGTCTTTAATCTTGTTCTTGAAGACAAACTCGATCCGGGTTCATTGAATGCAATGTGGCCATCTGGACCAATGCCTTTTCAAAG .:.x..........................x...........x.....x...........:.....x.....:...........:.....:...........:.....:..........:...............:.....x:x:.....x.....:..:........x..:..:..:..............x.....:x.... 204M 176/204 86.3% 204/94230402 0.0% 0/204 0.0% 19970840 NA +3096 chr4 + 190214555 44716490 44716489 44716537 48 AAAACTTATTTTTAACTGTAGATTATATATACACACACATATATAAAT chr4 - 94230402 14529777 14529776 14529824 79700579 79700578 79700626 48 AAAACTTTTTTTTAACTTTATAGTGTATGTGTACACACATATATAAAT .......x.........x..x.x.:...:.::................ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 30186713 NA +14010 chr4 + 190214555 44717084 44717083 44717300 217 ACAGTTAATGACAAAAGGTTTTTACATACCTCCAACAAAAAGATCTATTCCTCCAGCTTCTTTTATTTTGTTTTCAAAAGCATCACATTCTGCTTGTAAATCTGCAGCATTCCCGTCAAGGATATGTGCATTATTAGGATCTATATCGATATGCTTAAAAAAATTATTCCACATATAAGAATGGTAGCTTTCAGGATGATTTCTTGGAAGTCCTAAA chr4 - 94230402 24740614 24740613 24740830 69489573 69489572 69489789 217 ATAACTAACCATAGAGCATTTTCTCATACCTCCAACAAACAGATCAATCCCTCCTGCTTCTTCAATTTTCTTTTCAAATGCATCACATTCCACCTGTAAGTCTGGAGCATTCCCATCAAGGATATGAGCATTATTTGGATCTATGTCAATATGTTTAAAGAAGTTATTCCACATATATGAATGATAACTCTCTGGATGATTTCTGGGAAGTCCTGAA .:.::...:x.:.:.:x:....:x...............x.....x..:.....x.......:x.....x........x...........::.:.....:....x.........:...........x........x........:..:.....:.....:..:..............x.....:..:..:..x...........x.........:.. 217M 177/217 81.6% 217/94230402 0.0% 0/217 0.0% 19976470 NA +8444 chr4 + 190214555 44718299 44718298 44718420 122 TATAGCTTACCTACATATTCATCCATATTAAAGGTCTTCACATATTTAAAAGAAAGGTGTCCATTCTTATGATATTCTATTAGTTTTTTATAGCATCCTAAAGGTGTACTCCCTAAAAGACA chr4 - 94230402 24741284 24741283 24741405 69488998 69488997 69489119 122 TAGAGCTTACCAACATATTCATCCATGTTGAAAGTCTTCACATATTTGAAAGAGAGATCTCCATTCTTGTGATATTCTATTAGCTTTTTGTAGCAGCCCAATGGTGTACTCCCTGTTAAACA ..x........x..............:..:..:..............:.....:..:.x.........:..............:.....:.....x..:..x............:xx.:... 122M 103/122 84.4% 122/94230402 0.0% 0/122 0.0% 19977015 NA +8969 chr4 + 190214555 44722080 44722079 44722264 185 TTACCTGTTGGTAAACCCAGTGTAAAATATCTGTCCTGTCCAGGTTTGAACTGAATGATGCGATTACAGATGTATTTGGCTGCCCATTCACTAGCCAAGTCATAGTTATCAAGAATTACAAGCCTCATTACGGTGACGCACAGCTTCCAGAACAAGTTCAAACCTGAGAAAAGTCCATTGTAGAA chr4 - 94230402 24741707 24741706 24741891 69488512 69488511 69488696 185 TTGCCTGTCGGTAGACCAAGTGTGAAGTATCTTCCTTGAGTAGGCTTGAATTGGATAATACGATTGCAGATGTATTTGGCTGCCCATTCACTTGCCTGATCGTAGTCTTCAAGAATGACAAGCCTCATTATGGCAGCAAAGAACTTGGATGATGAAATAAACCTGGGGAAAAGAATTTTGTTAAA ..:.....:....:...x.....:..:.....x:.:..xx:...:.....:..:..:..:.....:..........................x...x::..:....:x........x.............:..:::.:x.x.:...xx.x:.::.:x.x..x.:x.:......xx:x....x:.. 185M 132/185 71.4% 185/94230402 0.0% 0/185 0.0% 19980373 NA +3413 chr4 + 190214555 44781063 44781062 44781197 135 TTCCCCCATCCCTCCTTTCTTTCCTTCCTTCCCTTATAGATATGTACACGCACACACACACACACAAACACACACAGTCTGTAAAGTTGCAGTTAGTGAA--------TTTTAGTTTTTCAGAGTTAA----CCATGCAA----TAAACCA chr4 - 94230402 32106681 32106680 32106825 62123578 62123577 62123722 145 TTTCCCTCTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA---ACCTTCTTCCAAATT---CTCGGTGAAAATTGCATGTTTTGCTTTCCAAATTCAAAACTTCATGCAACAGTTAAACCA ..:...:x.:x.x:...x:.........:....:xx.xxx:....:...:...........:........---..xx...x:x..:..---x.::.....--------x...x.:...:..:.x.:..----:.......----....... 70M3D15M3D9M8I20M4I8M4I7M 92/129 71.3% 145/94230402 0.0% 22/129 17.1% 12674382 NA +3000 chr4 + 190214555 44864489 44864488 44864537 49 ACTGTATCTCAAGGAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAAG chr4 - 94230402 34672382 34672381 34672430 59557973 59557972 59558021 49 ATTGTATCTCCTGTAACAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGG .:........xx.x..x.....:......x.:...............:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 10192107 NA +3535 chr4 + 190214555 44871509 44871508 44871635 127 ATATATGTATATGTGTGTG---CATATATATGT--------GTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGATCATATACATATGATATGGTTTGGCTCTGT---GTCCCCACCTAAGTCTCACATTGA chr4 - 94230402 33398780 33398779 33398916 60831487 60831486 60831623 137 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGA-CAGAGATA---GATAtgtatgggaactgttgaatcatagcctgaacctctgattga .....:::.:...:.::::---......x....--------.....:......:....:.:.......x.x.............-..x.x.:.---......xx.x..xx....---:..x:x:...:.::...xx..... 19M3I11M8I43M1D8M3D18M3I24M 89/123 72.4% 137/94230402 0.0% 18/123 14.6% 11472729 NA +3636 chr4 + 190214555 44871517 44871516 44871581 65 ATATGTGTGTGCATATATATGTGTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398867 60831536 60831535 60831600 65 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGA ....:x:...::x..x.x:....:........:..:.:.......:.:.............x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 11472714 NA +3692 chr4 + 190214555 44871519 44871518 44871600 82 ATGTGTGTGCATATATATGTGTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGATCATATACATATGATATGG chr4 - 94230402 33398803 33398802 33398882 60831521 60831520 60831600 80 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAG-AGATAGATAtg-tatgg ..:.:x:..:..x..x.x.....:...........:.:.......:.x.............x.x-.x...x.....-..... 64M1D11M1D5M 63/80 78.8% 80/94230402 0.0% 2/80 2.5% 11472716 NA +3008 chr4 + 190214555 44890915 44890914 44890977 63 TATATATATATATACACACACATATATACACACATATATATATTTACAATTATTGTATTATCT chr4 - 94230402 85546032 85546031 85546094 8684309 8684308 8684371 63 TATTTATATATATACACACACAGATACACACATAGAGCTATATGTATTATTTCTGAAAAATCT ...x..................x...:.....:.x.xx.....x..:x...x:..x.xx.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -40655117 -53575285 +3148 chr4 + 190214555 44890917 44890916 44890963 47 TATATATATATACACACACATATATACACACATATATATATTTACAA chr4 - 94230402 28470366 28470365 28470412 65759991 65759990 65760037 47 TACATATGTATACACAGACATGTATGCACACACATACATACTCACAA ..:....:........x....:...:......:...:...:.:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 16420551 NA +3369 chr4 + 190214555 44987735 44987734 44987795 61 CTCCCAAGTTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:::.......::x...x::x.x........::...........:......x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 26790596 NA +3033 chr4 + 190214555 45008084 45008083 45008139 56 AGATTTTCTTTTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTTGAGA chr4 - 94230402 8983598 8983597 8983653 85246750 85246749 85246805 56 AAATTTTTCTGTTCCTGTGTGTGTGTGCGTGTGTGTTTGTCTCTGCTGTTTTGAGA .:.....::.x..:.............:........x...x.x.x:xx........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 36024486 NA +3038 chr4 + 190214555 45026496 45026495 45026551 56 TCTATAGATCTCTGTATATCTCTCTATATATAGATCTATAGATCTCTGTATATCTC chr4 - 94230402 84448139 84448138 84448194 9782209 9782208 9782264 56 TCAGTACAGCTTTGTATATCTATCTATATACAGATAGATAGATATCTGTATCTTTC ..x:..x.x..:.........x........:....xx......x.......x.:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -39421643 -54808759 +6354 chr4 + 190214555 45046872 45046871 45047155 284 GTACATGTATGTGTGGACACCTTTTCTCACTTTGTCTGGGCCACATGCCAATCAGGAGAGTCTTCTGCCTGTTTTAAATGTCACCTTTTGCAGTGTTTTGTGGTGATGGGCATTCCAGCTTCTATTAAAAAAAACAGATAATGCCCCAGGCTATACTAGCCAAGCTCTAACTGCATTTTTCTCTATGTGGAATATTAAATACATTACTGGTATCCCATACAATTCTCAAGGACAAGCCATAGTGGAAAGAATGAATCTCTCCCTAAAACAGCAATTGCAAAAGC chr4 - 94230402 75164803 75164802 75165082 19065321 19065320 19065600 280 GTACACGTGTCTATAGATACATATAGTCATTTTATGTGGGCCACCGCTCAACCTGGAGAAAAGGCTATGCATGTAGAAAGGCATCTCAGTTGTTGCTTTGCGGTTATGGGTATACCA----CTACAAATAAAAACAGACAATGGCCCAGCCTACACTAGTCGTAGGCTTGGGGAGTTTCTGCAAACATGGGGAGTAAAACACAGTACGGGTATCCTGAACTCGCCCACAGGCCAGACGATAGTAGAACAGGCAAATAGAACATTAAAAAGGTATTTGGAGAAGC .....:..:.x.:.:..:..x.x.xx...:...:.x........xxx:...:.x.....:xxxx..::x::.x.x:..x.x..:..:xxx::x..:....:...x.....:..x...----...:x..x.........:....x.....x...:.....:.:x:xx..x:xx.x:...:.x:xx.::...::x:.x...:...x...x.......::x..xxx:.:xx...x..::.x.....:...x:::::...xxxx.x:.....x:.:.x...x.:.... 117M4D163M 166/280 59.3% 280/94230402 0.0% 4/280 1.4% -30117931 -64112471 +6297 chr4 + 190214555 45063248 45063247 45063544 297 CAAATGTATTTTCAGTTTTCT--AAGCAGC--CCATTTCTTGAAGGACTGGCAAAAGGAAGCTATTCTGAC-AATTTGGCTGAACTCATGGAAATTTCAGGCTGGGCCAGATGGTAAGACTCAGCTGTTGTGTGAAGCAGGT-------AAAGGC-----------------------------------------AGCATTTAAAATGCTACTGGCAGTTTTCCT---GAGACTTGACA-ACAACAGATGTTCTGGATTTCTTTTTCCTAAAATGTTCTCCAAAATCACAAATTATGTGGCATTATGTTTGTTTTGCAGACAAAGGAACCTTTTCCCACCAGAGTGATAAGTG chr4 - 94230402 24810547 24810546 24810885 69419518 69419517 69419856 339 CACATTTATTTTTAGTTTTCCCCAAGCATTTTCTAGTGTTTTGAACACTGGCAAAACATCATGATTCTGACCAGTTTGGCTGCACTC--TGTAATGTCAGCCCAGACCAGATGGTAAGCCTCAGCTGCTGTGTGAAACAAGTTagaaaaaaaaacaaaaaaccaaacaccaaaacaataacaaaaaaaaTCCCACGAGCACTTAAAATACTACTGGGAGTTTTATCAAAGATACTTTACAGAAAACAAATGTTGTGATTTTGTTGTTT--------TTTTTTTAAATAAAAACTTATGAAAC----TGCATATCATGTAGAGGTAGATACATTTGCTTGCT-GAATGATCAATG ..x..x......:.......:--.....x:--.:.x.x:..x:.:x..........x:xx::x........-.:........x....--x.x...x....x.::.:............x........:........:..:..-------...::.-----------------------------------------....:.......:.......x......x::---..x....x...-.x....:.....x..:x...x..x..:--------..:.::x....x.x..x.....x::.----..:x.:.:x..:...x:x..:x..x...x.:::.:-..:....x.:.. 21M2I7M2I39M1I15M2D53M7I6M41I30M3I11M1I27M8D26M4D35M1D12M 200/282 70.9% 339/94230402 0.0% 72/282 25.5% 20252701 NA +3864 chr4 + 190214555 45102289 45102288 45102416 128 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAA chr4 - 94230402 30533164 30533163 30533284 63697119 63697118 63697239 121 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAG-------ACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA .:.x.:....:..........::.:.:......:...xx.x..:..:.x:.:..xxx:..-------.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.:.:...x.. 60M7D61M 78/121 64.5% 121/94230402 0.0% 7/121 5.8% 14569125 NA +3104 chr4 + 190214555 45102333 45102332 45102485 153 AAGGGGAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAAAGAAAAAGAAAG------------AAAAAGAAAAGAGAGAGGAG----------------GAAGGATGATGAGG-----ATATTGCATTTCTCATGCACTCATGTTTTA chr4 - 94230402 29503818 29503817 29504005 64726398 64726397 64726585 188 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAATGTAGGCTGCATGTC---TATACTCTTGTCTTA ..:::......:...::.:........:x:.::..:....:...:.----.x:....:....:.:.x:...-.x...x:.x..x..:x......------------.x:.:...x....x:.:..:----------------:........x..:.-----.x::.....x..---.::....x...:... 46M4I21M1I22M12I20M16I14M5I12M3D15M 102/150 68.0% 188/94230402 0.0% 41/150 27.3% 15598515 NA +3397 chr4 + 190214555 45102338 45102337 45102418 81 GAGGGAGGGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGA chr4 - 94230402 36691893 36691892 36691973 57538430 57538429 57538510 81 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA .::.........:..x....:....:.:..x:.x..:.:...:..::..:x...::.:.:....x..x...xx::..:... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 8410445 NA +3101 chr4 + 190214555 45102350 45102349 45102455 106 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGAGGAGGAAGGATGATGAGG chr4 - 94230402 54827386 54827385 54827491 39402912 39402911 39403017 106 AGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAG .:.:...:..:.x.......::.x...x....xxx.:xx.x:..x.:x::...:.::.x.:x..x.:xx..:.::.:.........x..:........x..::.:. 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% -9725036 -84505366 +3223 chr4 + 190214555 45102350 45102349 45102455 106 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAGAGAGAGGAGGAAGGATGATGAGG chr4 - 94230402 54828363 54828362 54828468 39401935 39401934 39402040 106 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAG .:.:...:..:.x........:.x...x....xxx.:xx.x:..x.:x::...:.::.x.:x..x.:xx..:.::.:.........x..:........x..::.:. 106M 65/106 61.3% 106/94230402 0.0% 0/106 0.0% -9726013 -84504389 +3119 chr4 + 190214555 45102354 45102353 45102427 74 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAAG chr4 - 94230402 36858304 36858303 36858377 57372026 57372025 57372099 74 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x.::..x..::.......... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 8244050 NA +3109 chr4 + 190214555 45102360 45102359 45102438 79 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGA-----AAAAGAAAAGAGAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx...:.:.:...:.:..-----.x.........:.:.. 63M5I16M 56/79 70.9% 84/94230402 0.0% 5/79 6.3% 8244066 NA +3225 chr4 + 190214555 45102366 45102365 45102426 61 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAAA chr4 - 94230402 27809316 27809315 27809376 66421027 66421026 66421087 61 AAACCAGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAA ...xx.:..:.:.::.:....x:....x...::......x......:.......:...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 17293050 NA +3062 chr4 + 190214555 45103368 45103367 45103429 62 GTATTAGCATCCTAAAGGCTTCTCTATCTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 8076756 8076755 8076817 86153586 86153585 86153647 62 GCATTACGACTTTAAAAAGCTCTGCATCTGCTTTTCTTTTCCTTTTTATTTTTTTTCTTTTT .:....xx.:::....::x:...x:....x:.........:......x........:..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 37026612 NA +10153 chr4 + 190214555 45140920 45140919 45141283 364 TTGATATGCCACTCTGATGAACTTCAGAATGCTTAACATCATCTTGTTTAATTTCATGTTTC--AAAAAGCTTCTCAATTGCAGGATCAATTACTTTCAATCTCCACATCAATCAGTCCAGATGGTTCTCATTATTTGCTAAGGATAGCTGCAAATTGAAATTTTTGAACCCATGATGCATATTGTGTTAATCCTTGATATGGAAGGTTCCTTCTGCAGAATAAGTGGAGCTGAAAAAGGTGTGTTTACATTCACAAACTGAATATTATTTAAGGAATAAAAGAGACTCTTTAAAGTGTTAAACCCAGATGAACACTGAAAAATACAGTCTTCAGAAAAACAAATCATTTCACTTCTGTATTCATT chr4 - 94230402 24847521 24847520 24847842 69382561 69382560 69382882 322 TTGAAGTACAGTTTTGATTAACTCTAGAAATCATAATATTATCTTGTCTATTTTCATGCTCTGTAAAAGGCTCTAAAATGGTAGGATCAATTAGATTTGATTTCCATACCAATCAGTCCAGATGATTCCCATTATTTTCTGAGGATAGCTGCAAATTGAATTTTTTAAGGCCAGAATTCACATTA----------TGAAAAAGGTGATATTTTTTGTGCAATAATCAGAGCTGAAGACAG------------CCTAAACTCGTGATTTTTTCAGACTTGAAAGCAAGTTTGCAAAGT--------------AAAATTGACTA-------TTTCAGAGAAAGGAATT-TTTTTTTTTTGCATTCTTT ....x:.:.x::.:....x....::....xx.x...:..:.......:..x.......:.::--....:...::xx...x.:...........xx..::..:....:.:...............:...:........x..:...................x.....:.:x...x:..x..:...:----------...x.x:.:x.:.x::..:..::x.....x::........:.x:.------------.x:.....x:xx...x...x..:xx.:....x:.x.:.x:.....--------------..x.:...xx.-------:......:...x:...:-...:x:..:..:....x.. 62M2I121M10D45M12D45M14D11M7D17M1D19M 221/320 69.1% 322/94230402 0.0% 46/320 14.4% 20293399 NA +3437 chr4 + 190214555 45185448 45185447 45185623 176 GTCACTGCTACAGGAAAATACATTGGATGATCTTTATATGCATATGATGTTGGCTGCTATTCATGCCTAGGCACCTATATATACATATACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACACACACACACACATATATA--TATATTTCCTT chr4 - 94230402 73121045 73121044 73121222 21109181 21109180 21109358 178 GTCATTACACCAGGAAAGTAGAACTGAAACTGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTT ....:.:.xx.......:..x.x:x..x:x.x.x:.:x::..x.x:x...x:x..xx.:.x.....x..xx..:x:.:.......:.x.x::x.:x:..:...:::.:.x::.:.::x:.x...:.:x::...:.:.x.:..:.x....x.x........:....--:.x........ 165M2I11M 100/176 56.8% 178/94230402 0.0% 2/176 1.1% -27935597 -66294805 +3179 chr4 + 190214555 45185513 45185512 45185596 84 CCTAGGCACCTATATATACATATACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACACA chr4 - 94230402 8395780 8395779 8395862 85834541 85834540 85834623 83 CCCAGGC-CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:....-.x.:.:.:..::.:.:...xx.:..:...x....:.:::..::x:.:x.xx...................x..... 7M1D76M 56/83 67.5% 83/94230402 0.0% 1/83 1.2% 36789733 NA +3240 chr4 + 190214555 45185518 45185517 45185601 84 GCACCTATATATACATAT-----ACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACACACACAC chr4 - 94230402 14964796 14964795 14964884 79265519 79265518 79265607 89 GCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...::......x.x:.:.-----...:xx....:.x.:::::::....::.::..x........xx........::............. 18M5I66M 57/84 67.9% 89/94230402 0.0% 5/84 6.0% 30220722 NA +3101 chr4 + 190214555 45185522 45185521 45185598 77 CTATATATACATATACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACACACA chr4 - 94230402 8395786 8395785 8395862 85834541 85834540 85834617 77 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:.:.::..:.::::x..x.:..:...x:...:.::...:.x.x:..xx.:.................x..... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 36789736 NA +3419 chr4 + 190214555 45185523 45185522 45185594 72 TATATATACATATACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCC----TACATTAATACACACACACACACACAGACACA ...:.:.:....x....x...x..:....::.::.x----......x...:...............x..... 36M4D32M 53/68 77.9% 68/94230402 0.0% 4/68 5.9% 36789728 NA +3290 chr4 + 190214555 45185526 45185525 45185608 83 ATATACATATACATTTATATATATATACACACACATATACATTTATATACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:::...:::.x:...x.:..:..:x:...:..:..::::..:..xx.:.................x.....x.::x... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 36789738 NA +3118 chr4 + 190214555 45185566 45185565 45185628 63 ATTTATATACACACACACACACACACACACACACACACACATATATATATATTTCCTTTGAAA chr4 - 94230402 87372742 87372741 87372804 6857599 6857598 6857661 63 ATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAA ....x:.x...........x.........:x:.:..::.::..::..........:.xx.:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -42187176 -52043226 +3394 chr4 + 190214555 45201895 45201894 45201958 64 ATATATATATATATATATATATATATATATATATATAAATTTTTTTTTTTTTGAGACAGAGTTT chr4 - 94230402 8681930 8681929 8681992 85548411 85548410 85548473 63 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA-AGAGCTT .....x..........:...::.:.:.:...:......x.:...........xx..-....:.. 56M1D7M 50/63 79.4% 63/94230402 0.0% 1/63 1.6% 36519965 NA +3319 chr4 + 190214555 45212087 45212086 45212147 61 ATATACATATATATACATATATATACACACACATATATATACACATATATATACACACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ...:.x..::...:.x..:...........:...:....:.x.......:x...:...::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 37615674 NA +3197 chr4 + 190214555 45212091 45212090 45212153 63 ACATATATATACATATATATACACACACATATATATACACATATATATACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x.:.:.x.......:....:.:x..:.x::....x.:...::.......... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 27691342 NA +3774 chr4 + 190214555 45212095 45212094 45212204 110 ATATATACATATATATACACACACATA--TATATACACATATATATACACACATATATATATACACATATATATACACATATACACATATATTTTATATATATACACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.........:.........:.--x.:....:...:x:x:.x::.....:...xx.x:..:x..x............x:.:x.....x::.:.x.:.:xx....... 27M2I83M 74/110 67.3% 112/94230402 0.0% 2/110 1.8% 40794752 NA +3232 chr4 + 190214555 45212100 45212099 45212151 52 TACATATATATACACACACATATATATACACATATATATACACACATATATA chr4 - 94230402 28470366 28470365 28470417 65759986 65759985 65760037 52 TACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA .......:........x....:...::.....:...:....x....x..x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 16741734 NA +3277 chr4 + 190214555 45212158 45212157 45212253 96 CATATATATACACATATACACATATATTTTATATATATACACATATATATATTATATATATACACACATATATATATATTATATATATATATATTT chr4 - 94230402 37069566 37069565 37069658 57160745 57160744 57160837 93 CATGTGTAAATCCGTG-ACACATTTATTTTGTATATATGTATATATAAATGCTGCATATAGACATGTATGCA-GTATAGTG-ATATGTACATATTT ...:.:..x.:x.:.:-......x......:.......::.:.....x..::.::.....x...:::..::.-:....x.:-....:..:...... 16M1D55M1D8M1D14M 65/93 69.9% 93/94230402 0.0% 3/93 3.2% 8142592 NA +3452 chr4 + 190214555 45219049 45219048 45219156 108 TAGGATCTCTCTCTGTTTCGGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-----TGCTCTGAGGTCTACTTTTTCTTATAGCCACTTCTGAT chr4 - 94230402 13208550 13208549 13208662 81021741 81021740 81021853 113 TGGCAACTCTATCAGTTTGGGTACTTCTTTTTTATCTTTTTTTTCTTTATTCTTCTATCTTTGTTTCAGTTAATATAATCTCATATACACTTTATCCCCTAACATCCTTTGAT .:.x.x....x..x....x.......:......x.:........:...x..:..:.x.:...x...:xx.-----.:x...x.x:.x:.....x..::x..:.xx.:.:.... 70M5I38M 73/108 67.6% 113/94230402 0.0% 5/108 4.6% 32010499 NA +3027 chr4 + 190214555 45226481 45226480 45226534 54 CTAAATAAATAAACAAACAAACAAATAAATAAAATAAATAGTACTTGGTAAAGA chr4 - 94230402 25212000 25211999 25212053 69018350 69018349 69018403 54 CTAAATGAATAAACATACAAACAAACAAATAAAATCAACATTTCTTTTCACAGA ......:........x.........:.........x..:.x.x...xx:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 20014481 NA +3021 chr4 + 190214555 45246141 45246140 45246213 73 TATTTTCTTGTATTTGGGAGTTTTAATTTCCTTTTTGGGCAATTCCTTCAATCTGATTTCAACTGAATTCAAA chr4 - 94230402 88281299 88281298 88281371 5949032 5949031 5949104 73 TGTTCTTCCATAGTTGAGAGTTTTGCAGGCCTTTCTGTGCAATGCTCTGATTCTGACTTCCTCTGAATTCAAA .:..:.::::..x...:.......:xxxx.....:..x.....x.::.x.x.....:...xx........... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% -43035158 -51195244 +3315 chr4 + 190214555 45288395 45288394 45288490 96 TTAATAAACTCCCATTTATATATATATATATATATATATATATATATATATATATATATATATTAGGACACACACACACACACACACATACATATA chr4 - 94230402 54293139 54293138 54293228 39937175 39937174 39937264 90 TTAAAAAAACCCCAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAA------ACAGTACACACCCACGTACACACATATATATA ....x...x:....xx.::.:..x...:.......:...:.:...:xxx:...:..x.------.x:::......x...::.........:..... 58M6D32M 62/90 68.9% 90/94230402 0.0% 6/90 6.7% -9004744 -85225658 +3187 chr4 + 190214555 45291211 45291210 45291273 63 GCAACACCTCCTTTTTTCTGTTTTTTTTAATTGTTGTTGTTGTTGTTTGTTTGTTTGATAGAT chr4 - 94230402 17488378 17488377 17488440 76741963 76741962 76742025 63 GCAGCAGTTCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTGGT ...:..x:..:x...x.:..x:......x:...........:..x............x.x.:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 27802833 NA +3000 chr4 + 190214555 45298533 45298532 45298583 51 TTTTCTGTTTGATTTTTCTGTTTTAATTTCTCTCTTTTTCTTTTACTGTTT chr4 - 94230402 68397466 68397465 68397516 25832887 25832886 25832937 51 TTTCCTTTTTTAGTTTTCTGCTTTAGTCTCTCTTCCTTTCTTTTGCTGCTT ...:..x...x.x.......:....:.:.....:::........:...:.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -23098933 -71131469 +3341 chr4 + 190214555 45299859 45299858 45299915 57 AACTGTCCTGGGCTGCACACAGCCCATGGGCTGCAGGTTGGACAAGCTTGGTTTAGC chr4 - 94230402 14521747 14521746 14521803 79708600 79708599 79708656 57 AGTTGTGCTGGGTTGCACACAGCACATGGGCTGTGGATTGGACATCCCTGACCTAGC .::...x.....:..........x.........::.:.......xx.:..:::.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 30778112 NA +3071 chr4 + 190214555 45307074 45307073 45307112 39 ATGAAACAAAACAAAACAAACAAATAAACAAAAAAGACA chr4 - 94230402 64097923 64097922 64097961 30132442 30132441 30132480 39 ATTAAACAAAACAAAACAAACAAATAAAAAAAAAAGGCA ..x.........................x.......:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -18790849 -75439553 +3271 chr4 + 190214555 45314103 45314102 45314150 48 TGTGTGTGTGTGTGTATATATATATATAAAACATATAATATGTATTAT chr4 - 94230402 63396167 63396166 63396214 30834189 30834188 30834236 48 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATACCAT ............................x..:.:...x.:.:..::.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -18082064 -76148338 +3895 chr4 + 190214555 45325555 45325554 45325676 122 TTCTTCATCCCCTTCTCTGCACTGGGGTTC----TGAGCATTGCTGTTACTGGTTTCTGTGTGTGTG----------TGTGTGTGTGTGTGTGTGTGTGCGCATGTGTGTGTGTGTGTATATGTGTGTGTGCATTT chr4 - 94230402 39267067 39267066 39267197 54963206 54963205 54963336 131 ttcttcctttctttTTCTGCCTTTGGGCTAATAATGAGTTCTGCAGTTG-----TTCCATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCT ......x.::.:..:.....x:.x...:.x----....:x:...x...:-----...::...:...:----------.x:..:.:x:.......:..x.....:...xx.........:...:.:x........:. 30M4I15M5D13M10I59M 82/117 70.1% 131/94230402 0.0% 19/117 16.2% 6058488 NA +3169 chr4 + 190214555 45339884 45339883 45339931 48 TGTGTGTGTGTGTGTATATATATATATATAAAAC--AATGTATCACATGA chr4 - 94230402 63396167 63396166 63396216 30834187 30834186 30834236 50 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATACCATGA ...............................x..--.x.....xx..... 34M2I14M 44/48 91.7% 50/94230402 0.0% 2/48 4.2% -18056283 -76174119 +3453 chr4 + 190214555 45347210 45347209 45347292 83 TAATCAAATGGAAATCTCATGAGCATTACGAAAGTAACCAGAGCAGCTGCCTTTGAATTCTGCCAAAGAGACAGATGCTCTTG chr4 - 94230402 86723650 86723649 86723730 7506673 7506672 7506753 81 TAACCATATGATAGACCTAGAGGCAACTCCAAAGCTGCCAGG--AGCTGCCTTTGGAGTCTGCCAAGGAGACAGATGCTCATG ...:..x...:x.:x.::.x::...x:x.x....:x:....:--...........:.x........:.............x.. 42M2D39M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% -41376440 -52853962 +3307 chr4 + 190214555 45366016 45366015 45366096 81 TGAAACCCTGTCTCTACTAAAAAAACAAACAAACAAACAAACAAAAAACAAAAACAAAAACATCAAACCAAATCCTCTGAT chr4 - 94230402 37057538 37057537 37057617 57172786 57172785 57172865 80 TGAGATAATCTTTCTAGTAAAATAAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAAATTAAA-ACTCTGAT ...:.:xx.x.:....x.....x..x............x.xx...x.....x.....:....xx...::...-x....... 72M1D8M 60/80 75.0% 80/94230402 0.0% 1/80 1.2% 8308478 NA +3329 chr4 + 190214555 45366021 45366020 45366075 55 CCCTGTCTCTACTAAAAAAACAAACAAACAAACAAACAAAAAACAAAAACAAAAA chr4 - 94230402 71528698 71528697 71528752 22701651 22701650 22701705 55 CCCCTTTCTTACCTAAAAAACAAACAAACAAACAAAAAAAAAACCACAACAGAAA ...:x.:::...:x......................x.......x.x....:... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -26162677 -68067725 +3058 chr4 + 190214555 45400069 45400068 45400128 60 CATTGTTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTATATT chr4 - 94230402 89377156 89377155 89377215 4853188 4853187 4853247 60 CATTTTCTTTTTGGAAAAAAAGAAAAAAAGAAAAAAAAGTAACAACAACAAACATGTATT ....x.:...x.::.......:.......:........:x..x..x..x..:.x.:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% -43977087 -50253315 +3103 chr4 + 190214555 45417501 45417500 45417561 61 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .....::x.:.:::..x....x.....::...:.......:.......:.x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 12457933 NA +3036 chr4 + 190214555 45417515 45417514 45417554 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -44403767 -49826635 +3662 chr4 + 190214555 45427119 45427118 45427197 79 AAACATAAGAAAACAACTATATATATACACACACACACACACACACATATACACAACTATATATATATATTTCCATAGG chr4 - 94230402 87372724 87372723 87372802 6857601 6857600 6857679 79 AGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGG .:.:.x:......x..:...x.x:.x...........x..........x..:..:xx.:..::..........:xx... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -41945605 -52284797 +3083 chr4 + 190214555 45458016 45458015 45458077 62 AAAAAAAAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGGAAGGAAGAAAGGAAGAAA chr4 - 94230402 24662130 24662129 24662191 69568212 69568211 69568273 62 AAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAA ..............:.....xx....x:.:....::.::x.::.:..::.x......:.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 20795886 NA +3321 chr4 + 190214555 45462560 45462559 45462639 80 AAACTTAAAGTATAATAAAAAAAAAAGAATAGCTAAAAAAAAAAAAAAAAAAAAGAATACACAGAGATTAAATGTTGAAG chr4 - 94230402 50529255 50529254 50529331 43701072 43701071 43701148 77 AAGCTTCAAGTACAA--GTAAATGATGCATA-CTAAAAAAAAAAAAAACAAGAAAAATACACAGAAAATAATTGTTCAGG ..:...x.....:..--:x...x:.x.x...-................x..:..:..........:.x...x....x.:. 15M2D14M1D48M 60/77 77.9% 77/94230402 0.0% 3/77 3.9% -5066695 -89163707 +3245 chr4 + 190214555 45487539 45487538 45487578 40 TTTTTTTTTTTGTGTGTGTGTGTATACATATATATATATA chr4 - 94230402 19559288 19559287 19559327 74671076 74671075 74671115 40 TTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA .........x................:...........:. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 25928251 NA +3581 chr4 + 190214555 45487541 45487540 45487595 55 TTTTTTTTTGTGTGTGTGTGTATACATATATATATATATATTAAATTCATGCGTA chr4 - 94230402 19559288 19559287 19559342 74671061 74671060 74671115 55 TTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATA .....................:..:.............:.x:x....:x..::.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 25928253 NA +3498 chr4 + 190214555 45488404 45488403 45488470 67 CTGGTCTTTTGTTTGTTTGTTTTGTTTGTTTTTTGGTTTTTTTTTT-TTTTTTTTTCCTTTTGAGACA chr4 - 94230402 42766009 42766008 42766076 51464327 51464326 51464394 68 CTGGTAATTTGTTCGTGTGTTTTGTTTGTTCATGGGTTTTTTTTGTATTTTTTTCTTTAATTGAGACA .....xx......:..x.............:x.x..........x.-.......:.::xx........ 46M1I21M 54/67 80.6% 68/94230402 0.0% 1/67 1.5% 2722395 NA +3147 chr4 + 190214555 45524448 45524447 45524496 49 CTCAAAAA--CAAACAAACAAACAAGCAAACAAAAACAAACAAAAAAGAAA chr4 - 94230402 75412021 75412020 75412071 18818332 18818331 18818382 51 CTCAAAAAACCAAACAAAAAACCCAGCAAACCAAAACAAACAAAAAAAAAA ........--........x..x.x.......x...............:... 8M2I41M 44/49 89.8% 51/94230402 0.0% 2/49 4.1% -29887573 -64342829 +3136 chr4 + 190214555 45577316 45577315 45577370 55 GTAGATAATTAAAACATGAAAAACAAACAAACAAACAAACAAACAAAAAACACAC chr4 - 94230402 40371497 40371496 40371551 53858852 53858851 53858906 55 GTATATATATGAGGCAAAAAAAAAAAAACAACAAACAAACAAACAAAAAACACAC ...x...xx.:.::..x:.....x...xx.......................... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 5205819 NA +3312 chr4 + 190214555 45603245 45603244 45603326 82 TTATAACTTTAACAGGCATGAAATGAAAACAAAATGAAACAAACAACAGATAAGCAAACGAAAAAC----TTATTTTATTTTTTTT chr4 - 94230402 10852581 10852580 10852666 83377737 83377736 83377822 86 TTAAAATAATAACAATAATAATACAAAAACAAAACAAAACCACTGACAAACAAGCAAACGAAAAACCCCACTGTCTCATTGTTTTT ...x..:xx.....:xx..:.x.::.........::....x.x::...:.:...............----:.:.:.:...x..... 66M4I16M 58/82 70.7% 86/94230402 0.0% 4/82 4.9% 34750664 NA +3428 chr4 + 190214555 45615416 45615415 45615582 167 TACATTTTC--CCTCTATTGTCCTTAAATGTTGTGGCTCCTGAATGTTAGATTTGTTTTTCTCATTCTATTCTCTG-ACTTTATTTATCTTATAGTATAGTAACTTCAAAATGTATATATATGTGTGTGTGTGTATATATATATATATATATATATATAGTTTTATTATA chr4 - 94230402 19559191 19559190 19559342 74671061 74671060 74671212 152 TACAATTTCAGCCTCAAATATCCTGAAATCTTAATTCTGCTTTGTTGTA-ACTTATTTAACTTATTCCTTCTTCTGCATTTTTAATTTTTTTTAGC-----------------TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATA ....x....--....x.x.:....x....x..:xxx..x..xx:.xx..-.:..:...xx..:....:x.::....-.:...xxx.x.:..x...:-----------------...x.x.x.x...........:.:................:.xx..:....xx.... 9M2I38M1D26M1I19M17D57M 104/149 69.8% 152/94230402 0.0% 21/149 14.1% 26056225 NA +3650 chr4 + 190214555 45617097 45617096 45617166 70 CTCCCGGGTTCAAGCGATTCTCTTGCCTCAGCCTTCCAAGTAGCTGGGACTCCAGACATGCGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:.:.........:.x...x.xx.x.........:...........:...x.--..:...:....::.. 53M2D15M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 27419958 NA +3283 chr4 + 190214555 45709096 45709095 45709148 53 ATAAATGTGTGTGTATGTGTATGTGTGTATGTATATATACACATATACATACA chr4 - 94230402 25393253 25393252 25393305 68837098 68837097 68837150 53 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCA .....x:......:..........:.....x.:.:.:......:.:...::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 20315843 NA +3820 chr4 + 190214555 45735379 45735378 45735534 156 TCTTCACCTATCTCCTGTATTTCTC--CACTTCTTTTTCCT----------TTCTTCCTTCCTTCCGTCCTTCTGTCCTTCCTTCCTTCCTCTCTCTTTCCCTCCCTCCCTTCCTCTCTCTCTTTTCTTTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 59424957 59424956 59425124 34805279 34805278 34805446 168 TCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTCATT .....x.::..:.:..x.x..::.:--......xx.....:----------...:.....:x.:.:....:.x..:::...:..:.x.x..:.x..x...x:x...:x::..:.x.x:.:.:.....::..:..:x:...:.::.x:...:xx.:::::......x.. 25M2I14M10I117M 93/156 59.6% 168/94230402 0.0% 12/156 7.7% -13689578 -80540824 +3779 chr4 + 190214555 45735396 45735395 45735566 171 TATTTCTCCACTTCTTTTTCCTTTCTTCCTTCCTTCCGTCCTTCTGTCCTTCCTTCCTTCCTCTCTCTTTCCCTCCC-----TCCCTTCCTCTCTCTCTTTTCTTT-----TTCTTCCCTTCCT---TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTT chr4 - 94230402 26883444 26883443 26883618 67346785 67346784 67346959 175 TATTGCCACATTTCTTTTTCTTTT---------TTGTAGCTCATTATACCAGCTCCCTCTCTTTGTCTTTTTCTGCCTGATATACTTATTTCCCTCTCCTTTCTTTACTGCTTGTTCCTTTCCTGACTCTGTGCTTCTTTCCCAGTTCCCCCTTTGCCATCTATCCTTCCCTCTGTTTCCCTCT ....x.:x..:.........:...---------..x::x.::x:.:.x.:xx..:...::..:.x.....::..x..-----.x.:.x::..:.....:.......-----..x....:.....---..:x.x....:....:xx:.:..::::.x..x..:x.......:..:x.:::...:. 24M9D44M5I24M5I13M3I57M 103/162 63.6% 175/94230402 0.0% 22/162 13.6% 18851952 NA +3111 chr4 + 190214555 45744399 45744398 45744464 66 ATGCTTTTTATTTATTTTATGTAATTTTTAATTTTTATTTTAAGTTCTGGAATACATGCACATGAT chr4 - 94230402 60043131 60043130 60043196 34187207 34187206 34187272 66 ATGTTCTCTGATTATTTTATGTACTTTTGAATTTATTTTTTAATTGCTGAATTAAATGCTTATAAT ...:.:.:.:x............x....x.....x.x......x.x...:.x..x....x:..:.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -14298732 -79931670 +3428 chr4 + 190214555 45761311 45761310 45761401 91 GAAGGAAGGAAGGAAAGAAGGAAGGAAGG-AAAGAAGGAAGG--AAGGAGGGAGGGAGGGAGGGAAAGAAGGAAGGAGAGAAAGAGAGAGAGAG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .:..:.:...x.:x.....x..:::....-.:.....x....--..:x:..x:x...............:.:........::::.:.::x.:.. 29M1I12M2I50M 62/91 68.1% 94/94230402 0.0% 3/91 3.3% 5295536 NA +3096 chr4 + 190214555 45761362 45761361 45761434 73 GGAGGGAGGGAAAGAAGGAAGGAGAGAAAGAGAGAGAGAGAGAAAGGAAGGAAGGAGGGAAAGAAGGAAGGGA chr4 - 94230402 2046810 2046809 2046882 92183521 92183520 92183593 73 GGAAGCAGAGCGAGAAGAACGGAGAAAACTTGAGTCAAAGAGAGAGGAGGAAAGGAGGAAAGAAGAGGAAAGA ...:.x..:.x:.....:.x.....:..xxx...xx.:.....:....:.:.......:..::.::.:.::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 43714552 NA +3284 chr4 + 190214555 45767057 45767056 45767131 75 CTGTGTTGCTGAAG-AGTCAATCGTATGTGTGTTT---------------GTGTGTGTGTGTGTGTGTGTGTATATATATATACATATACA chr4 - 94230402 89821231 89821230 89821321 4409082 4409081 4409172 91 CTGTGTTGCAAGAGCAGAAAATTCTCTGTTTGTTTCTTCTGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x::..-..xx...:x.x...x.....---------------:.........x.x....................:..:.... 14M1I20M15I41M 61/75 81.3% 91/94230402 0.0% 16/75 21.3% -44054174 -50176228 +3103 chr4 + 190214555 45767088 45767087 45767169 82 TTTGTGTGTGTGTGTGTGTGTGTGTATATATATATACATATACACATAAGAAGCCCATTTTATTTAAAATAGACATAATAAT chr4 - 94230402 50558507 50558506 50558588 43671815 43671814 43671896 82 TTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAGATTTACAGAAAAAT ..x...::.....x..........:..:.:....:.::....x...x.::..:x::x....xxx...:..xx...x..x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -4791419 -89438983 +3169 chr4 + 190214555 45779958 45779957 45780030 73 CTGCAACCTCCGCCTCATGGATTCAAGCGATTCTCATGCCTCAGCCTCCTGAGCAGCTGGGATTACAGGCGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:x...:......:.x...x..x.x........::::..:......:.:....x.:... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 27582832 NA +3088 chr4 + 190214555 45822505 45822504 45822563 59 CTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAATAGCTTGAACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx...x.xx.x........::...:.....x........x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 27625366 NA +3085 chr4 + 190214555 45822935 45822934 45822973 39 GTGTGTGTGTGTGTGTGTGTACATATATATATATGTACA chr4 - 94230402 89821283 89821282 89821321 4409082 4409081 4409120 39 GTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ........x.x..........:................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -43998348 -50232054 +3048 chr4 + 190214555 45822936 45822935 45822988 53 TGTGTGTGTGTGTGTGTGTACATATATATATATGTACACACACACACACACAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:.............:.x:...x:.:::::::..:........ 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -25159693 -69070709 +4716 chr4 + 190214555 45822940 45822939 45823075 136 TGTGTGTGTGTGTGTACATATATATATATGTACACACACACACACACATAACATATATATATATATACACCATGGTGTGCATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATGAAGTACTACTA chr4 - 94230402 25393260 25393259 25393388 68837015 68837014 68837143 129 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCT-------TGCgtgtgtgtgtaggtatgtatgtatgtatataCACATGAACTGTAACTA ......::.....:.::..:...x.:.:...............:....::x:x.xxx:.x.xx.xx.:x:.x...:x.-------..:...........x:...:...:...:......:.:.....x.::x.... 78M7D51M 87/129 67.4% 129/94230402 0.0% 7/129 5.4% 20429680 NA +3821 chr4 + 190214555 45822942 45822941 45823062 121 TGTGTGTGTGTGTACATATATATATATGTACACACACACACACACATAACATATATATATATATACACCATGGTGTGCATGTGTGTGTGTGTGTGTATATATATATATATATATATATATA chr4 - 94230402 25393260 25393259 25393373 68837030 68837029 68837143 114 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGC---ACACGTTCTTACCAGAACTTAAT----TTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCA ......::......::...:...x.:...::............:.---...::.x:x..:xx:x..x:x..----.x.x..xx:x..:........:..x:...:...:...:......:. 45M3D23M4D46M 77/114 67.5% 114/94230402 0.0% 7/114 6.1% 20429682 NA +14967 chr4 + 190214555 45846010 45846009 45846358 349 ATTTTATGTTGATTTTGAATAAACTAGATAAACAAAATTAATGTTACCAACAGGAATG--TATTTCTAAAATACTGCATTTTTACATGTTCAGAATGATTTTTAATTCATTTTGATTAGAGCAAATTGCTTACTCTCAAGAGGTTGATAGACATTAAAGATTTCCACTTTAGTGGTTTCCTGTGACATCAGTG-----TTACATCTATGCAAAAATCTGTTTCCTTAGCAACAAGAAGCAAACTG-----TTCAAGGGAGCCAACAGAAA-AAACTGAAATGT--GTTTAATGTTAAATACCAGAGCTTAATATGGATATTATATTCATATAGAATACAGTGGTGAATTTAAAGGATTTCAAAT chr4 - 94230402 25074687 25074686 25075050 69155353 69155352 69155716 364 ATTTATTTTTGGTTCTGAATCGTTGTAAAGAAAAGAAGTGTAGTCACTAGTGAGCATGCTTGCTTCGAGAACACTGCATTTCTACATGCTCAGAATAATTTTATATTCATTTTGATTAGAGCAAACCGCTTACACTCAAGGGGTTGACAAACGTTAAAGATTTCCACTTTAGTGGTTTACAATGACATCAAAGTGGCCTTACATCTTTGAAGAGATCTGTTTCCTTGGCAACATGAGGAAAGCTGTTCATTTCAGAGGTGCCTACAGAGATCAACTGAGGTTTTATTTTCATGTTAAATACCAAAACTTTATGCAGATAATGACATTGTACATAATATGCTACTGAGTTTAAAAGATGTTCAAT ....xx.x...:..:.....x:x:xx:.x:..x.:..x.:xx..:..:.::::.x...--.::...x.:..:.........:......:.......:.....xx.....................::......x......:......:.:..:.........................x.x:........:x.-----........x..x.:.:............:......x..:.x..:...-----....::..x...x.....:.-x......::.x.--x...x.............:.:...x..:::....x.:xxx.::..:.x....::x.:x...:......:...x.:x... 58M2I133M5I47M5I20M1I12M2I79M 255/349 73.1% 364/94230402 0.0% 15/349 4.3% 20771323 NA +3291 chr4 + 190214555 45867447 45867446 45867518 72 TATGTGTGTGTGTATATATATATATATATATATATATACATATACATACATATATATATATATACACAGCAA chr4 - 94230402 47095159 47095158 47095230 47135173 47135172 47135244 72 TAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACAGCAA ..x.x.....:..:.:.:.:..:.:.:...:..:..:.:.x.:xx..x...:.:...::............. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -1227712 -93002690 +3446 chr4 + 190214555 45870450 45870449 45870595 146 CTAGATGAAAAAGA----AAGAAAGGAAAGAAAGCAAGAAAGAAAAAAAAGGAAGAAAAGAAAGGGAGAAAGAAAGAGAGAGTGAGAAAGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAG chr4 - 94230402 65242434 65242433 65242583 28987820 28987819 28987969 150 CTAAATGAAAGACATGCAATAACATTGAAGAAAGGACAAAAAAAAAAAAAGAAAGATGTGCTAATACTCAAGTCAAGAGGATAAAGGAAGGTAAGAAAGTGAGATGAAGTGAGAAAGAGAAAAAATAAAACAGGTAAGTTAAAAAGGTAG ...:......:.x.----.x:.x.xx:.......x.x:...:.........:....x:x.xx.:x:xxx...xx.::::..xx:..:....x......:x..:.x:...x:...:.:.....:..x:...x..:x:..xx.:....:x.. 14M4I132M 89/146 61.0% 150/94230402 0.0% 4/146 2.7% -19371984 -74858418 +3162 chr4 + 190214555 45870490 45870489 45870595 106 AAAAAAGGAAGAAAAGAAAGGGAGAAAGAAAGAGAGAGTGAGAAAGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAG chr4 - 94230402 54827386 54827385 54827491 39402912 39402911 39403017 106 AGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAG .:....::...:x..........x...x....xxx.:x..x..:x:.x::::.:....x..x..x.:xx.:..:..:::.....:.x.....::.:::.:.x.... 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% -8956896 -85273506 +3492 chr4 + 190214555 45870515 45870514 45870604 90 AAGAAAGAGAGAGTGAGAAAGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAGAAAAAGAAA chr4 - 94230402 67772342 67772341 67772430 26457973 26457972 26458061 89 AGAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAA-AAAGAATGGGAAA .::....:.x..:...:.:......x:.:..:x.:.:x..:.::.x....x.:...:.....:...xx...:....-......x::.... 76M1D13M 60/89 67.4% 89/94230402 0.0% 1/89 1.1% -21901827 -72328575 +3423 chr4 + 190214555 45870521 45870520 45870624 104 GAGAGAGT-GAGAAAGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAGAAAAAGAAAAGAAAGAAAGAGAGAAAAGA chr4 - 94230402 16696995 16696994 16697097 77533306 77533305 77533408 103 GACAGAGTTGAGCAAGCAAAGAAAAAGGAGCAAAGAAAGGGAAAAAAAAAAAGAATA--AACCAAAAGATAGAATCCCAATGAGAAGATCTTAACTGAAAAAAAA ..x.....-...x...x..........:.:x........:....:...:......x.--..xx:.....x....xxxx..x..:....xxxx..xx..:....:. 8M1I48M2D46M 74/102 72.5% 103/94230402 0.0% 3/102 2.9% 29173526 NA +3026 chr4 + 190214555 45870534 45870533 45870605 72 AGGAAAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAGAGAAAGAAAGAAAGAAAAAGAAAA chr4 - 94230402 70253831 70253830 70253902 23976501 23976500 23976572 72 AGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA ......:...:.:...........:x.:.x..:x:........x:x...x:..:x:..x..:x....:.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -24383297 -69847105 +3377 chr4 + 190214555 45874518 45874517 45874607 90 ATATTTATTGAATGAGTAGACAAATAAATTCTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATACATATATGTATATATATACGT chr4 - 94230402 70982603 70982602 70982681 23247722 23247721 23247800 79 ATATTTATT-----------CATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .........-----------..x:...x..:.x.x:x...........:........:....:.x:...x..:.:...::...:.:..:. 9M11D70M 58/79 73.4% 79/94230402 0.0% 11/79 13.9% -25108085 -69122317 +3002 chr4 + 190214555 45874595 45874594 45874662 68 TATATATATACGTATATATATGTATATATATACATATATATATGTATATATATGTATACATATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xxx:......:.:....x.:......:x.:..:..:x:...:.::.:....:..:.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -2292443 -91937959 +3187 chr4 + 190214555 45874639 45874638 45874782 144 TATATATATGTATACATATATATGTATACATATATATATGTATACAT------ATATACATATATGTATATATATATGTATATATTACCAAAAC-ACGTAACAGCAATTTTTTGTTCAGAGACAAGCATGAATATTGCTTTAACATGAAGA chr4 - 94230402 8395789 8395788 8395930 85834473 85834472 85834614 142 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAAT---------AAGGTAGGTATTAATAAAGCTGTATCACAGAAA .:.:.:.....:.:....x.:......x:.:....:....:x.....------.:.:...:.:.:::.x.:.:.x...x...x.xx...x....-..:.xx::....x.---------:..::.:.:..x....xx...x..x..:::.:. 47M6I41M1I14M9D33M 86/135 63.7% 142/94230402 0.0% 16/135 11.9% 37478850 NA +3215 chr4 + 190214555 45874670 45874669 45874722 53 ATATATATGTATACATATATACATATATGTATATATATATGTATATATTACCA chr4 - 94230402 25493135 25493134 25493187 68737216 68737215 68737268 53 ATATTTATTTACCCATACATACATATATGTACATATACAGGTATATAATATCA ....x...x..:x....:.............:.....:.x.......x..:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 20381535 NA +3358 chr4 + 190214555 45881271 45881270 45881331 61 TGATGGAATATATATATATATATATATATATGTATGTGTGTATACACACACACACACACAC chr4 - 94230402 25393251 25393250 25393308 68837095 68837094 68837152 58 TGATAAAA---ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ....::..---..:.:.::..:.:...:.......x.....:.............:..... 8M3D50M 46/58 79.3% 58/94230402 0.0% 3/58 5.2% 20488020 NA +3144 chr4 + 190214555 45881278 45881277 45881327 50 ATATATATATATATATATATATATGTATGTGTGTATACACACACACACAC chr4 - 94230402 88147181 88147180 88147230 6083173 6083172 6083222 50 ACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC .:..:..x:x................x.....:.:::............. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -42265903 -51964499 +3429 chr4 + 190214555 45881279 45881278 45881338 60 TATATATATATATATATATATATGTATGTGTGTATACACACACACACACACACACATATA chr4 - 94230402 88147180 88147179 88147238 6083165 6083164 6083223 59 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATA ..:..:..x:x............:.:.x.......:.:.............-..:..... 51M1D8M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% -42265901 -51964501 +3084 chr4 + 190214555 45883290 45883289 45883337 48 AAAAAAAAAGAAAGAAAGAAAGAAAAAAAAATGGGAAAAGAAACTGAA chr4 - 94230402 25781764 25781763 25781811 68448592 68448591 68448639 48 AAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAATTTAA ...:.................:.:.....x.x....::.....:.x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 20101526 NA +3723 chr4 + 190214555 45907864 45907863 45907980 117 AACCAGGATATGTAAAGAATTCAAACAACTCAATAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGATTAAAAAATTGAAAAAAAAAGAATAGACTTTTTTCAAAATTTTTTTTC chr4 - 94230402 25255638 25255637 25255746 68974657 68974656 68974765 109 AAGCAGAATATATAAGAAA--------ACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGTAGATTTGTATTTCTTCCTCCTTTTTTCTC ..x...:....:...::..--------...x..:..x::..::x.x...................xx..:.:..:..:x.....:.:x...x.x.xx...:...xxxx......:.. 19M8D90M 75/109 68.8% 109/94230402 0.0% 8/109 7.3% 20652226 NA +3688 chr4 + 190214555 45940262 45940261 45940354 93 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAA----GAAAGAAAGAGGGAGAAAGAGAGAGAAAGGAAGGAAGGAAGAGGGAGAAAGAG chr4 - 94230402 61334701 61334700 61334797 32895606 32895605 32895702 97 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAG ......:.....x......x.:x...:.:...x:.:..:.----..x....xx..x:::...x.x......x.:x.....::..x...:........ 40M4I53M 66/93 71.0% 97/94230402 0.0% 4/93 4.3% -15394439 -78835963 +3544 chr4 + 190214555 45940280 45940279 45940380 101 AAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAGGGAGAAAGAGAGAGAAAGGAAGGAAGGAAGAGGGAGAAAGAGTCT-CCTCAGGAAGGAAGGGAGGGAGG chr4 - 94230402 2046809 2046808 2046910 92183493 92183492 92183594 102 AGGAAGCAGAGCGAGAAGAACGGAGAAAACTTGAGTCAAAGAGAGAGGAGGAAAGGAGGAAAGAAGAGGAAAGAATCCGCCTTGAGGAGGAACGACAGGTGG .:...:x.:..x.:...::.x:..:.:..xxx.:.xx..........:.:.:.....:.:....:.::......:..:-...:::.:.....x.:x:..x.. 78M1I23M 64/101 63.4% 102/94230402 0.0% 1/101 1.0% 43893471 NA +3194 chr4 + 190214555 45940353 45940352 45940404 52 AGTCTCCTCAGGAAGGAAGGGAGGGAGGAGGGAGGAAGGAAGGGAGGGAGGG chr4 - 94230402 54428870 54428869 54428921 39801482 39801481 39801533 52 AGTCTGCTCAAAAAAAAAGGGGGGGGGGAGGGGGGAAGGAGGGGAAGAGTGG .....x....::..::.....:...:......:.......:....:.::x.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% -8488517 -85741885 +3255 chr4 + 190214555 45979282 45979281 45979379 98 TCTGTCTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAAAAAAGAAAAGAAAAAAAATTCAGGGATTTCAAAATAACTATTTGTTGGACA chr4 - 94230402 30765306 30765305 30765403 63465000 63464999 63465097 98 TCTGCTTTTCAACAACAAAGAGTAAAGAGTAGGAAAAAAAAAAAAAAAAAAGGCATAATTAGACCCTTAAAGAATCCAAAATGAAGATTTGGTTAACA ....::.:xx..x..x...:.:x.....:x.:......:.............:x.x:.xx.:.xx:.:.::..x.:......:.xx.....x.x:... 98M 63/98 64.3% 98/94230402 0.0% 0/98 0.0% 15213976 NA +3064 chr4 + 190214555 45979290 45979289 45979348 59 AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAAAAAAGAAAAGAAAAAAAATT chr4 - 94230402 3302522 3302521 3302580 90927823 90927822 90927881 59 AGGAGGAGAAGAAAAAGAGAAAAATTGAAAGAAAAAAAAAAAAGAATGGGGGAGGAATT .::.::.:..:.....:.......xx:...................x:.:::.::.... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 42676768 NA +3022 chr4 + 190214555 45994440 45994439 45994502 63 GTGCGTGTGTATGTGTATATATATATACATATATATACACACACATATATATATATACACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ...:.:....:......:.:.:...:.::..:...x..xx.:x...:.:...::...:..... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% -1100724 -93129678 +15613 chr4 + 190214555 45995118 45995117 45995362 245 AGGATGTTAGGGCAATCAGGCTGCGACATCTGTCACCTCATTGATCACTAGGGTAAATATGGCTGATCTGGCTGGCTAGGCAGGTGTCCCCTTCCTCCCTCACCACTCCTTGTGCATGCCTCCCAAAGCTGCATGCTGGGTCAAAGAAGACGACCATCCTCAATAGATGAGG-ATGAGTCTTCAGTAAAGGGTATATGATTACTTGTGCTCCCTTGCTAGAACCTCCAAACAAGCTCTCAAGAAAT chr4 - 94230402 69279861 69279860 69280103 24950300 24950299 24950542 243 aGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACGGTAGC-TGCGCTCCCCTGCTAGAACCTCCAAACAAG--CTCAAGAAAT .......x.....:...x...................:..........:.....x:..x.....................::......:........:......:....x.....:.x......:........:...x....:....:.......x...:.:.....x:x..-.:x:x..x.....x.........:.:.x:.-..:......:....................--.......... 172M1I30M1D30M2D10M 203/242 83.9% 243/94230402 0.0% 4/242 1.7% -23284743 -70945659 +3073 chr4 + 190214555 46022759 46022758 46022795 37 ATTTATTACATATATATGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 27034820 27034819 27034856 67195547 67195546 67195583 37 ATTTATTATATATATATGTGTGTGTGTGTGTGTATAT ........:........................:.:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 18987939 NA +16081 chr4 + 190214555 46040952 46040951 46041246 295 TCAGACTTCTTTTGATTTTTGCTTATGAAGTAGATTTTATAAGTAAAGATAGCCAACCCAATAAACCAAGTTGAACAGGGCAAAAGCGGTTGGGAAAAATATTCTAGAATAAGAGTCAATTTTGGCAATGCGTATGTGTATCCTTCCTTCCCTCCAAGATCCTGTTCTGCAGTCTTCAAAGCAACAGAAGAAGCTGGCACAATCTTTGCCCTCCAAACACTGATACCCATAATCATC------TTCTTGCGGCACAGAAATATTATTCATTGGAATCAGAGTGGATCCAGGATGGAGACCA chr4 - 94230402 25143828 25143827 25144127 69086276 69086275 69086575 300 TCAGTTCTTTTCTGAGTTT-GTCTAGCCAGTAAAATTTATAGATAAAGATAGCCAATCCAATAAACAAGATTAAACAATGCAAAGGCAGTTGGAAAGAAGATTCGAGAATAAGAGTCAATTTTTGCAATACGAATATGTATTCTTCCTTCTCTCCAAGATCCTGTGCGGCAGTCTTCAAAACAACAGAAGAAGCTAGCACAGTCTTTCCCTTCTAGGCACTCATATCCATAATCATCATCACGTTCAGGGAGATTATTAATGTTATTAATTGGAATTAGGGTTGATCCAGGTCGAACAGCA ....x::.:..:...x...-.::..xxx....:.x......::.............:.........x.::..:....:x.....:..:.....:..:..x....x..................x.....:..x..:.....:........:..............x.x............:..............:.....:.....x..:..:.::....x...:...........------...xx.x:.xx:.xx...:.....x........:..:..x........x:.:.x.x.. 19M1D217M6I58M 229/294 77.9% 300/94230402 0.0% 7/294 2.4% 20897124 NA +7578 chr4 + 190214555 46040966 46040965 46041193 228 ATTTTTGCTTATGAAGTAGATTT--TATAAGTAAAGATAGCCAACCCAATAAACCAAGTTGAACAGGGCAAAAGCGGTTGGGAAAAATATTCTAGAATAAGAGTCAATTTTGGCAATGCGTATGTGTATCCTTCCTTCCCTCCAAGATCCTGTTCTGCAGTCTTCAAAGCAACAGAAGAAGCTGGCACAATCTTTGCCCTCCAAACACTGATACCCATAATCATCTTCTT chr4 - 94230402 83278867 83278866 83279096 10951307 10951306 10951536 230 ATTCCAGCTGAGGATGAAGAATCGCTAGAGATAGAGATAGGCAATCCAGTAGACAATATTGAAGAGCAGGAAGGCAGTGGGAAAGAAGACACGGGAGTAGGAGTCCAGGCGGGAGATATGAATGCGGACCCTCCCCTCCCGCCACATCCCTGTCTGACAGTCCTCAATGCAGCAGAAGAACCTCTCACATTCCTTTCCTTCCAGGCACGGAGAGCCAGGGTCGTCATCTT ...::x...x.x..x.x...x.:--..x.::..:......x...:...:..:..x.x:.....x..x:x:..:..:..x..:..:..x.:x.x:..:..:.....x.xx:x..x:..::.x...:.x.:...:..:....x...x:x:.....::x:.....:....x...:........x..xx....x..:..x..:....::...x..x.x...x::..:..x.... 23M2I205M 147/228 64.5% 230/94230402 0.0% 2/228 0.9% -37237901 -56992501 +6405 chr4 + 190214555 46051397 46051396 46051745 349 AAATAGAAATTTTTCTTTTTAACATACCGAGGCTTTATTTTTTAGCTTTCTGTCTTTAGTAGCAGTCTTTCCTTTTTGGTTGCTGGTAAAATAATGCAAGGTTCCATATTCCATCAAGGCTGCAAAAACAAAAATGAAACAAACAGAAACAAAGAGATCCATCGCAGTCACATAAGAAACCTTAGGTAAAGACTTCCTGGCAATTGTACTCAGGGTTGTCATAGTCAGAACTGTAGTGATACCTATAGAGAGAGGAAACAAAACAGGAAATGAAAATTAATAGACCACATTTATTCTTCCATCTGATTTGGCAATATTGTGAGTGAAATTAAACAATAGAAACAAAAAT chr4 - 94230402 25229574 25229573 25229884 69000519 69000518 69000829 311 AAATAGGGCTATTTTCTTAGAACTTACC------TTATCATTCACTACACTTTTTCCATCCCAGGCCCATCCTCGTT------TTGTAAAATAATTAACAGTTGCAAATTCAATTAATGCAGAGAATACAAATGCATAACAGACAGCGATAAACCAATCCATAGCTGTTGCATATGCTACTTTGGGGAGTGAATTTCGAGCACTGATGCTCAGCGTTGTCATTGTCAACACAGTAGTAACTCCTGTAAGGGGATAAAAAAA------AAACAAACATCAACA------------------ATTTTACTTGG--ATTTTGAATGTTAAAATACAAAACAAAAAACAAAGT ......::x.x...::..xx...x....------....:x..:.x:x:x..x.:.::.x:xxx:.:.:x....:x..------.x..........xx.x:...x..x....x..:..x..x.x:..x.....x:::x....:....x:.:...xx:......x..x..::....x.xx..:..:..x.:x..x..:.x:...x.x:.:.....x........x....:x..x.....:.:x...:..::.:..x:...x..------...::..x..:..:.------------------..:.x.:....--..x...x:x..x...x..x.x..:.:...xx...:. 28M6D43M6D178M6D15M18D11M2D36M 197/311 63.3% 311/94230402 0.0% 38/311 12.2% 20821823 NA +13597 chr4 + 190214555 46051417 46051416 46051672 256 AACATACCGAGGCTTTATTTTTTAGCTTTCTGTCTTTAGTAGCAGTCTTT-----CCTTTTTGGTTGCTGGTAAAATAATGCAAGGTTCCATATTCCATCAAGGCTGCAAAAACAAAAATGAAACAAACAGAAACAAAGAGATCCATCGCAGTCACATAAGAAACCTTAGGTAAAGACTTCCTGGCAATTGTACTCAGGGTTGTCATAGTCAGAACTGTAGTGATACCTATAGAGAGAGGAAACAAAACAGGAAATGAAAA chr4 - 94230402 25146504 25146503 25146756 69083647 69083646 69083899 253 AACTTACTGATGGCTTAGGTTTTGCCTTCTTGTCTTT--------TCCTTTGTCCCCTTTTCTGTTGCTAGTAAAGTAATGCAAGGTGCCATATTCCATCAAGGCAGCAAACACAAAAATGAAGCAAACTGAGACAAAAAGATCCATTGCTGTCACATAGGAAACTTTTGGAAGTGACTTCCTGGCAATTGTGCTCAGTGTTGTCATGGTCAGCACCGTTGTAATACCTATTTAATAAAGAAAGTAAGAGGGAAGGGAAAA ...x...:..x.x:...xx....:x...::.......--------..:..-----......:x......:.....:...........x.................x.....x...........:.....x..:.....:........:..x........:.....:..x..x.:x.................:.....x........:.....x..:..x..:........xx.:x:.:....xx..:x:....:x..... 37M8D5M5I206M 197/248 79.4% 253/94230402 0.0% 13/248 5.2% 20904913 NA +3371 chr4 + 190214555 46051501 46051500 46051578 78 CATATTCCATCAAGGCTGCAAAAACAAAAATGAAACAAACAGAAACAAAGAGATCCATCGCAGTCACATAAGAAACCT chr4 - 94230402 92237154 92237153 92237231 1993172 1993171 1993249 78 CGTATTCCAGCAAAGCAGCAAAAACAAAGAGCAGACAGACGGCCATCCAGATGTCAATGGCCTTCACATAGGAGACCT .:.......x...:..x...........:.xx.:...:..:.xx.:xx...x:..x..x..xx.......:..:.... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -46185653 -48044749 +7336 chr4 + 190214555 46051501 46051500 46051672 172 CATATTCCATCAAGGCTGCAAAAACAAAAATGAAACAAACAGAAACAAAGAGATCCATCGCAGTCACATAAGAAACCTTAGGTAAAGACTTCCTGGCAATTGTACTCAGGGTTGTCATAGTCAGAACTGTAGTGATACCTATAGAGAGAGGAAACAAAAC------AGGAAATGAAAA chr4 - 94230402 83280345 83280344 83280517 10949886 10949885 10950058 173 CATACTCCATGAGAGCTGCAAAGACGAAGATGAAGCACACAGACACAAAGAGGTCCATGGCTGTGATATAGGAAACACGTGGAAGGTGCTTGCGGGAGATGGTACTCAGCGTGGTCATTGTTAGCACAGTGGTGATACCTA-----AGAGGAAAAAGAGCTAGTTTGGGTAATGAAGA ....:.....x.::........:..:..:.....:..x.....x........:.....x..x..x.:...:.....x:xx..x.::x:...x.x..x:..x........x..x.....x..:..x..x..:..........-----........x.:.:.------:..x......:. 141M5D14M6I12M 124/167 74.3% 173/94230402 0.0% 11/167 6.6% -37228844 -57001558 +3235 chr4 + 190214555 46056109 46056108 46056199 91 AAAAAAAAAAGAAAGGAAAAAAAAAAAAATAAATAAATAAATTAAAAAAAAAAAAAAAAAA---AAAAAAAAAAATAGTCTCCCATCACATTTG chr4 - 94230402 14507153 14507152 14507246 79723157 79723156 79723250 94 AAAGTAAAGTGAGGGGGGAAAAAATGAAGTAAACAAATATTTCAAAGGATGAAAAAATAAACTGAAAAAAAAAAAAAACCCTTCATTTTGCTTG ...:x...:x..::..::......x:..:....:.....xx.:...::.x:......x...---...........x.::.:::...:x:::... 61M3I30M 60/91 65.9% 94/94230402 0.0% 3/91 3.3% 31548956 NA +3106 chr4 + 190214555 46056109 46056108 46056184 76 AAAAAAAAAAGAAAGGAAAAAAAAAAAAATAAATAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGT chr4 - 94230402 16882686 16882685 16882761 77347642 77347641 77347717 76 AAAACAAAAAGATGACCTACCAAGTAGAATTTACAAACAAGTTAAAAAAAAAAAAAAAAGACAAAGAAAATAGAGT ....x.......x::xxx.xx..:x.:...xx.:...:..:..................:.x...:....x.x... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 29173423 NA +3173 chr4 + 190214555 46056113 46056112 46056180 68 AAAAAAGAAAGGAAAAAAAAAAAAATAAATAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 29321529 29321528 29321595 64908808 64908807 64908874 67 AAAACAGAAGGGAATTAAGGAGAAA-GAGCAAATAATTTAAAACAAAACAAACAAAAAAAAAAAACAA ....x....:....xx..::.:...-:.::......x......x....x...x............x.. 25M1D42M 52/67 77.6% 67/94230402 0.0% 1/67 1.5% 16734584 NA +8917 chr4 + 190214555 46058211 46058210 46058383 173 TCATACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAAAAAAATTGTCATGATAACATAATCCCCTGTAAGAAAAAAA chr4 - 94230402 83282380 83282379 83282552 10947851 10947850 10948023 173 TCTTACCGAGGGATGTCCTGGCTGGTGTAGAGTCTCTCTTGATCCAGAAGGAAACCCAGGACAGAACAACAGTCAGGATGCAGGGAATGTAGGTCTGAATGGCAAAATAACCCATACGTCTACTTAAGTCAAAGGAAACCGTCATCACCATGTACTCCCCTAGAAAAAAAGAA ..x....x.:x.....:..x..x..:::x.x:...:.x........:..:..x.....:..x........x.....:.....x.................:.::.....x.....x.x...:..:.:......::...::.....x.:x.::..x......:x..:....:.. 173M 127/173 73.4% 173/94230402 0.0% 0/173 0.0% -37224169 -57006233 +7816 chr4 + 190214555 46058214 46058213 46058405 192 TACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAAAAAAATTGTCATGATAACATAATCCCCTGTAAGAAA---------------AAAAAGTTTTATTTTGGCTATATAAT chr4 - 94230402 25395868 25395867 25396074 68834329 68834328 68834535 207 TACCAAATACAGTTCTAGCTGGTACAGATTCCTTATTTATCCAAAATGAAACTTGAGAAAGGATCACGGTCATAATGCATGGGATATACGTCTGAATCATAAAATAACCCATTTTCCGTCTGAGGTGGAAATATACTGTCATAACAATATATTCACCTAAAAAAAAAGAAAAGAAATATTTAAAAAGTATTTTTCTGACTACACGAT ....x..::xx.....x..x..:..x.xx..:.....x........x..x..:::......:.:x..x....x.........:..:..x........x:.:.....x......:.:.xx..x....x:...x.x.:......:.:..:...x..x...:x..:...---------------.......x..x..:..:...:.::.. 166M15I26M 137/192 71.4% 207/94230402 0.0% 15/192 7.8% 20662346 NA +19338 chr4 + 190214555 46058214 46058213 46058659 446 TACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAAAAAAATTGTCATGATAACATAATCCCCTGTAAGAAAAAAAAGTTTTA------TTTTGGCTATATAATATAAATCACAATCCATATATTTAAAATAAAAATGTCATTTAATGCTAGCATCATTTCACTATTTGAGTATTCTTTTTACCAGAGATCGTGTGAGTGATTTCAGTTGAGTTCCGTAACCCTACAAATGCAAACTGATATAATCTCCAGTATTTAGGATCAGCCACTTCTACGGAGGGCTTTTTCCACTTATACTCAATTTCATTTTTAGGGTATCCATCTATAGAGAAAAAATACAT--AGATT--------AGCAAGATCCAAA chr4 - 94230402 25149644 25149643 25150081 69080322 69080321 69080759 438 TACCCAGAGATGTCCTTGCAGGAACTGCATCCTTATTGATCCAGAATGACACCCATGAAAGAACAACTGTGAGTATACAAGGAATGTATGTCTGGATAGTAAAATATCCCATACGTCTGCTGAGATCAAAGAAGATTGTCATAATAATATAATCACCTATGAATTAAAAAAATGATAATAATTTTTGAATTATAT-CTGTTAGTTTTGTTTTACATAGATAACAC--------------ATGCCAAAAAC-CTTAACACTTTG--------CCTTACCAGATAGGGTATGAGAAATTTCAGTTGTATTTCGCAGCCCTACAAATGCAAACTGATACAGTCTCCAGTATTTTGGATCTGCTACTTCAACAGAGGTTTTCTTCCATTTGTATTCAATTTCATTTCTGGGATATCCATCTAGAATAAAACAACAAATCAAGACTCCAGACACAGCAAACTTCAAA ......:x.....:........x........:...........:..x........x..............x..x..:..x........x.....:.....:...........x.x......x..:.....:..:........:....:......x...:.:.:xx......:.xx..------...x:::.....-x.:.x.:.:x::x.::.:...xx...x.:--------------....:.:x.x.-:..x..xx....--------::........x.xx..:....x:..........x:..:..:.:.....................:.:............x.....x..:.....x..:....x:..:.....:..:..:............:.:..:..........x.:x:...x..:.x..--...:.--------.....:x.:.... 177M6I12M1D29M14D11M1D12M8D163M2I5M8I13M 322/422 76.3% 438/94230402 0.0% 40/422 9.5% 20908570 NA +5711 chr4 + 190214555 46058215 46058214 46058371 157 ACCCAACGATGTTCTTGCAGGCACTGCATCTTTATTGATCCAAAAAGACACCCAAGAAAGAACAACTGTCAGAATGCATGGAATGTAGGTCTGAATAGTGAAATATCCCATTCTTCTGCTCAGGTCAAAAAAAATTGTCATGATAACATAATCCCCT chr4 - 94230402 83348010 83348009 83348166 10882237 10882236 10882393 157 ACCAAAAACTGTTCTGGCGGGGACGGACTCCCTGTTCAGCCAGAAGGAGACCTGGGACAGGATTACGGTCATGATGCAGGGCAGGTAGGTCTGGATGACAAAGTACCCGATCTTCCTCTTGAGGTGAAAGTGCGTGGTCATGACAACGTACTCCCCT ...x..x:x......x..:..x..x.xx..::.:..x.x...:..:..x...:::..x..:.:x..x....x:.....x..x.x.........:..::::..:..:..x..::.:..x:.x....x...:x:x:.x.......:...:..x...... 157M 102/157 65.0% 157/94230402 0.0% 0/157 0.0% -37289795 -56940607 +8605 chr4 + 190214555 46064343 46064342 46064558 216 CTTTTGAAAATCCTATTTTATTTTCTTTCTTTTCATTTTTAAATAAA--------CAGCTTCTAAGGTTAAAATTCTATGAAATTATCAAGTGTTTTGTTACTTACAGCTTGAAAATTCCAGTGGACAGGAATGTTCATCCATGGGAAAGTTATGAAGCTGAAGATAACATTCTGCATTAATTGTCAATCTATTTAGATGGAAAGAAAAGTATTAAATAAAGAT chr4 - 94230402 25151140 25151139 25151347 69079056 69079055 69079263 208 CTTCAAAAAGTAATTACTTGCTCTCTTTCTGCTGGATTTAAAGGAAATGTAAAGCCTGGTTGTAAAGAGAAAA------GAAA-----AAGTATTGTACCACCTACAGCTTGAAAATTCCAGAGGACAGGAGTGTTCATCCATAGGAAAGTTATGAAGCTGAAGATAACACTCAGCATTAATTGTCAGCCTAATTAGAAAATAAGAACA-----AAAGAAAGAT ...:x:...:.xx.xx:..::.:.......x:.x:x...x..:x...--------.x.x..x...:.xx....------....-----....:..x.:::..:...................x........:...........:..........................:..x.............::...x.....x::x.....x.-----...x...... 47M8I18M6D4M5D121M5D10M 154/200 77.0% 208/94230402 0.0% 24/200 12.0% 20913203 NA +4179 chr4 + 190214555 46064387 46064386 46064553 167 AAACAGCTTCTAAGGTTAAAATTCTATGAAATTATCAAGTGTTT------TGTTACTTACAGCTTGAAAATTCCAGTGGACAGGAATGTTCATCCATGGGAAAGT-TATGAAGCTGAAGATAACATTCTGCATTAATTGTCAATCTATTTAGATGGAAAGAAAAGTATTAAATA chr4 - 94230402 25399087 25399086 25399249 68831154 68831153 68831316 163 AATCTACTTCTACTATTTAAATTCTGT--AGTTACAAGAAATTTCATAATTGTAACTTACAACTCCCAAATTTGAGAGGACAAGCATGACCATCCATGGGAAAATCCACTAATCTCATGG-GACACTCTGCACTTATTGTAAGCCTAT---AATGGAACAA-----ATTAAATA ..x.x:......xx:..x.......:.--.:...:x.::x:...------...x.......:..:xx.....:x..x.....:.x...x:.............:.-:.:x..x..x.x.:-:...:......:.x.....x.::....---:......x:.-----........ 27M2D15M6I55M1I14M1D27M3D10M5D8M 111/156 71.2% 163/94230402 0.0% 18/156 11.5% 20665300 NA +6741 chr4 + 190214555 46065361 46065360 46065629 269 TACCTTAGAGTATACAGAACTCGTCCATCATTCCAAATTCGAAGCAGACGATTAGGAGTTGTTATCCAGTGAGCATCAGATTTTCTTGAGTTTCTGAAGAAAGTGTCAGGAATCCAAATTTTTCCAACCATATTACTGTTAAGCATAAGCACTTTCATGGTACTATTGAATTTTAAACGACTGTCAAACCAGGTTTGGGCAAAAATTATATCTATTGTATATTCCTAAAATATAAGAAGAGTAACAACATATTAGTAAAGCTACTATTT chr4 - 94230402 25399327 25399326 25399593 68830810 68830809 68831076 267 TACCTCATTGTATACAGGATAGTGCCATTCCTCATTATTCTGAAGAGTTTATTTGGGGCCGTCATGTTATGTGCAACAGACTTTTTCCCATTCCTGAAGAAAGTGTCAGGAGTCCACACCTTCGAGACCATCAAGTTGTTAAGTCTTAAAATTTCAATAGGGCCATCATATTTTAATCTTTTGTCTACCCATGTCTGACGGAAGAAGACATCCATTGTATACTCCTGTATTTT--GCAGAAAAATTGCAGAAAAATAAAGATCACATTT .....:.xx........:.:xxxx....:x:..xxx....x:.:x..x:x...x..:.::..:..x:x:..x...x....:...:.:xx:..:..................:....x.::..:xx:.....xxx::.......:x.x.:x.:..:x..:.x:.:..::x.......x.xx:....x.x...x..:..:xx:..:.xx.:...:........:....:x.x.x.--.x...:x..:x:..x.xx.:.....x.xx:.... 233M2D34M 163/267 61.0% 267/94230402 0.0% 2/267 0.7% 20666034 NA +10498 chr4 + 190214555 46065361 46065360 46065603 243 TACCTTAGAGTATACAGAACTCGTCCATCATTCCAAATTCGAAGCAGACGATTAGGAGTTGTTATCCAGTGAGCATCAGATTTTCTTGAGTTTCTGAAGAAAGTGTCAGGAATCCAAATTTTTCCAACCATATTACTGTTAAGCATAAGCACTTTCATGGTACTATTGAATTTTAAACGACTGTCAAACCAGGTTTGGGCAAAAATTATATCTATTGTATATTCCT---AAAATATAAGAAGAGTA chr4 - 94230402 83286141 83286140 83286386 10944017 10944016 10944262 246 TACCTGAGTGTGTAGAGCACTTTTCCATCATTCCAAATGCGGAGGAGCTGATTTGGAGTGGTTATCCAGTGGGAATCAGCCCTCTTGGAGTTCCTAAAAAAGGTATCTGGGATCCAGATGCGGCTCACCATATTAGTGTTCAGTGTGAGGGCCTTCAAGGTGCTGTTGAAACGAAGACGCCGGTCGTACCATGTCTGAGCAAAGAAGATATCAATGGTGTACTCCTGTGAAAGAGAAAGAAGAATA .....x..x..:..x..x...:x...............x..:..x..x:....x.....x...........:.x.....x::.::.x.....:..:..:..:..:..x..:.....:..x:xx.:x.........x....x..::.:..x:.:....x...:..:.....x:xx.:...x.x...:x....x..:..:.....:.xx.....x..x..:..:....---...:x:x.......:.. 226M3I17M 172/243 70.8% 246/94230402 0.0% 3/243 1.2% -37220780 -57009622 +16435 chr4 + 190214555 46065362 46065361 46065621 260 ACCTTAGAGTATACAGAACTCGTCCATCATTCCAAATTCGAAGCAGACGATTAGGAGTTGTTATCCAGTGAGCATCAGATTTTCTTGAGTTTCTGAAGAAAGTGTCAGGAATCCAAATTTTTCCAACCATATTACTGTTAAGCATAAGCACTTTCATGGTACTATTGAATTTTAAACGACTGTCAAACCAGGTTTGGGCAAAAATTATATCTATTGTATATTCCT-AAAATATAAGAAGAGTAACAACATA-----TTAGTAAAGC chr4 - 94230402 25153809 25153808 25154074 69076329 69076328 69076594 266 ACCTTAGGGTGTATAATACTCTTCCATCACTCCAGATTCGAAGTAAGCGATTTGGAGTTGTAATCCAGTGGGCATCAGATTTTCTTGAGTTCCGGAAGAAAGTGTCTGGAATCCAAATTTTTCCAACCATATTGCTATTAAGCATAAGGACTTTCATCGAGCTGTTAAATTTCAGACGACTGTCATACCAAGTCTGGGCAAATATAATATCTATGGTGTATTCCTAAAAACAGAGAAAAAATATCTACATACACATTTACCAAAGC .......:..:..:.:x....x.......:....:........:.::.....x........x........:....................:.x............x..........................:..:...........x........x.x:..:..:.....:.:..........x....:..:........x..x........x..:.......-....:.x.::..:.:..x.x.....-----...x:..... 225M1I25M5I10M 216/260 83.1% 266/94230402 0.0% 6/260 2.3% 20911553 NA +3309 chr4 + 190214555 46066842 46066841 46066915 74 ATTATATATATGTACTATATATATTTATGTGTGCGTGTATATATGTGTGTGTATATATGTGTGTGTATGTATGT chr4 - 94230402 35554943 35554942 35555016 58675387 58675386 58675460 74 ATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT ...x..x:...:x:...x........:x.....:...:.:.....x....:........::.:::x.x:.:... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 10511899 NA +3042 chr4 + 190214555 46066876 46066875 46066935 60 GTGTATATATGTGTGTGTATATATGTGTGTGTATGTATGTTTGCATGTGTATGTATATAC chr4 - 94230402 39267150 39267149 39267209 54963194 54963193 54963253 60 GTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATAC ....:...:x.:.:::..:xx.:...........:..x..x.....x......x...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 6799726 NA +5951 chr4 + 190214555 46083946 46083945 46084061 116 ATCTCTGTGGCAGTTATTATTTTTAATATTTCTTACTTACCATATTAATTGGATCAACTGGTCCAATGCTGTTTACATAAACATCAGTTTCAATTACTGTGGGCCTCACTGCAAAA chr4 - 94230402 25166661 25166660 25166776 69063627 69063626 69063742 116 ATCTCTCAGATAATGTTTTCTGTCAATAATCTGAACTTACCATGTTGATTGGGTCAACTGGGCCAATGCTGTTAACATAGACATCTGTTTCAATTACGGTAGTTCTCACTAAAAAA ......xx.::.:.xx..x:.x.:....x.::xx.........:..:.....:........x...........x.....:.....x...........x..:.x:......:x.... 116M 87/116 75.0% 116/94230402 0.0% 0/116 0.0% 20917285 NA +10291 chr4 + 190214555 46097195 46097194 46097371 177 GCTTACCTCCTATATCTGGACGAAGTTTATTGTCATAGCCTTGAAGCAATGAATTCAGAATTTGTGTGATATCTCCTTCATGAATTTTTGGGGCCAAGACCCAGGTTTTGTTCACCGTTAAATCCTCATCATCTTCATCATCTGCCTTATCAACACTAAAT-------AATTCAAAGAAAAAAA chr4 - 94230402 25174798 25174797 25174981 69055422 69055421 69055605 184 GCTTACCCCCAATATCTGGCCGAAGCTTATTGTCATATCCTTGAAGTAAGGAGTCCAGTATATGAGTCACATCCCCGCCATGAATCTTTGGTGCAAGGACCCATGTTTTATTCACAGTTAGGTCTTCATCATCTTCATCATCTGCTTTATCAGCTCTAATTGTGATTGAATTGAAGAAAAAGAA .......:..x........x.....:...........x........:..x..:.:...x..x..x..x.:...:..x:.......:.....x..x.:......x.....:.....x....::..:....................:......:.x....x.-------....x..::....:.. 161M7I16M 142/177 80.2% 184/94230402 0.0% 7/177 4.0% 20922397 NA +3390 chr4 + 190214555 46117605 46117604 46117699 95 TCTCTCTCTATATATATATACACATATGTATACATATATACATATATATGTATATACGTATATAGCTGTATATATATACACATGTATATAGCTGT chr4 - 94230402 17853459 17853458 17853551 76376852 76376851 76376944 93 TTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTT--TTGCATATGTAAAGAAGTATGCATGACAGT .:.....x.x.:.x.....:..............:.x:..xx.x.:....:...:.:....x.--:..:....:..x.x.x:.:.::..::.x.. 63M2D30M 63/93 67.7% 93/94230402 0.0% 2/93 2.2% 28264146 NA +3624 chr4 + 190214555 46117671 46117670 46117767 97 TGTATATATATACACATGTATATAGCTGTATATATACATACATGTATATACA----TATACATATATACATATA--------CACATATACATACATGTATATACATAT chr4 - 94230402 73121108 73121107 73121216 21109187 21109186 21109295 109 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..:....x:........:..:.:..xx.:..:x:.......:.:..x:....----....::.:x:........--------....x.x...:.........x:..x.. 52M4I18M8I27M 70/97 72.2% 109/94230402 0.0% 12/97 12.4% -27003437 -67226965 +3141 chr4 + 190214555 46117680 46117679 46117747 68 ATACACATGTATATAGCTGTATATATACATACATGTATATACATATACATATATACATATACACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....x...:...:.:x........:...::........:.x.:...:.:x..::..:::..:.x:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 38521267 NA +3766 chr4 + 190214555 46117743 46117742 46117819 77 CATATACATACATGTATATACATATACATATATACATACATGTATATACATATATACATATGTATACATGTGTATCT chr4 - 94230402 71630131 71630130 71630207 22600196 22600195 22600272 77 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCT ..:x...:.:....:.......:.:...x.........:x.x.:...:...:.:.x:::....:x.:......:... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% -25512388 -68718014 +3252 chr4 + 190214555 46117749 46117748 46117817 69 CATACATGTATATACATATACATATATACATACATGTATATACATATATACATATGTATACATGTGTAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ......x:.::.....x..::.....:...::........:.x.:......x..:.:.::..:.:x:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 38521337 NA +3353 chr4 + 190214555 46117794 46117793 46117870 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229021 NA +3353 chr4 + 190214555 46117794 46117793 46117870 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232162 NA +3353 chr4 + 190214555 46117828 46117827 46117904 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229055 NA +3353 chr4 + 190214555 46117828 46117827 46117904 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232196 NA +3353 chr4 + 190214555 46117862 46117861 46117938 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229089 NA +3353 chr4 + 190214555 46117862 46117861 46117938 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232230 NA +3353 chr4 + 190214555 46117896 46117895 46117972 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229123 NA +3353 chr4 + 190214555 46117896 46117895 46117972 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232264 NA +3353 chr4 + 190214555 46117930 46117929 46118006 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229157 NA +3353 chr4 + 190214555 46117930 46117929 46118006 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232298 NA +3353 chr4 + 190214555 46117964 46117963 46118040 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44229191 NA +3353 chr4 + 190214555 46117964 46117963 46118040 77 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTA---TCTATATACATATATACATA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA .............:.xxx...:x...:.:................x..x::...:..---.:.::...x....x:.x... 57M3I20M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 44232332 NA +3388 chr4 + 190214555 46117998 46117997 46118067 70 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTGTA---TGTATACATAT chr4 - 94230402 1888773 1888772 1888845 92341558 92341557 92341630 73 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATAT .............:.xxx...:x...:.:................x..x::...:.:..---..:...x.... 59M3I11M 54/70 77.1% 73/94230402 0.0% 3/70 4.3% 44229225 NA +3388 chr4 + 190214555 46117998 46117997 46118067 70 ATATACATATGTATACATGTGTATCTATATACATATATACATATGTATACATGTGTGTA---TGTATACATAT chr4 - 94230402 1885632 1885631 1885704 92344699 92344698 92344771 73 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATAT .............:.xxx...:x...:.:................x..x::...:.:..---..:...x.... 59M3I11M 54/70 77.1% 73/94230402 0.0% 3/70 4.3% 44232366 NA +3105 chr4 + 190214555 46118020 46118019 46118079 60 ATCTATATACATATATACATATGTATACATGTGTGTATGTATACATATGTGTGTGTATAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATAC----GTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT .....x............----.....:..x.........x:.::.:.........:x.. 18M4D38M 46/56 82.1% 56/94230402 0.0% 4/56 7.1% 26413746 NA +3843 chr4 + 190214555 46118032 46118031 46118117 86 ATATACATATGTATACATGTGTGTATGTATACATATGTGTGTGTATATATATACATATGTATACATATGTGTGTATATATACATAT chr4 - 94230402 70982597 70982596 70982681 23247722 23247721 23247806 85 ATATATATATTTATTCATGTAACTTTTT-TCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .....:....x...x.....:xx.x.x.-.x.x.:...........:.:.:.........x:.:.x........::...:...:.. 28M1D57M 63/85 74.1% 85/94230402 0.0% 1/85 1.2% -24864565 -69365837 +3514 chr4 + 190214555 46123046 46123045 46123144 99 AATTTGTGATCGGTGACACTTTTCTCTCTCTCTCTCTCTCTGTCCCATACACACAAACACACACACACACAC--------------------------ACACACACACACACACACACACACACA chr4 - 94230402 49987049 49987048 49987173 44243230 44243229 44243354 125 AAATTATGGTTGGTAATACTCTCCTCTGTCACTGTGACACTAAATCATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatatatatatatatatacacacacacaca ..x..:..:.:...:.:...:.:....x..x..x.xx.x..:xx:....:.:...x.x..............--------------------------.:.:.:.:.:.:.:............. 72M26I27M 70/99 70.7% 125/94230402 0.0% 26/99 26.3% -3864003 -90366399 +3053 chr4 + 190214555 46160172 46160171 46160219 48 TGTTTTTATTTATTGTTGTTGTTTAGCTTGGTGTGTGTGTGTGTGTGT chr4 - 94230402 31440691 31440690 31440738 62789665 62789664 62789712 48 TGTCTGCTTTGGTTGTTGCTGTTTGGGTTGGTGTGTGTGTGTGTGTGT ...:.x:x..x:......:.....:.x..................... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 14719481 NA +3270 chr4 + 190214555 46178402 46178401 46178533 132 ATAATCATATATATATATATATATATATATATATACACACACAAACATATATATATACACACACACATATATATACACACACATATACACACACACACACACACACATATATAT-------ATATATGCATCCAATACA chr4 - 94230402 73121111 73121110 73121249 21109154 21109153 21109292 139 ATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACA ...x.....:.:.....:.:.x.x::..:x:..:.:..::.:.:::.:.::x:....::::x::.......x....:.x....x.x.......:::.:.x:..x.:x.x:x...-------...:::x..x..x..... 114M7I18M 77/132 58.3% 139/94230402 0.0% 7/132 5.3% -26942709 -67287693 +4355 chr4 + 190214555 46178403 46178402 46178514 112 TAATCATATATATATATATATATATATATATATACACA----CACAAACATATATATATACACACACACATATATATACACACACATATACACACACACACACACACACATATATA chr4 - 94230402 73121094 73121093 73121209 21109194 21109193 21109309 116 TAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .....x::.:.::..::....x:...:.:.........----..::.::.:...::....x::....:x:.....:.:x::...:...x.:..:.x....x.x........:.... 38M4I74M 74/112 66.1% 116/94230402 0.0% 4/112 3.6% -26942691 -67287711 +3697 chr4 + 190214555 46178406 46178405 46178512 107 TCATATATATATATATATATATATATATATACA----CACACAAACATATATATATACACACACACATATATATACACACACATATACACACACACACACACACACATATA chr4 - 94230402 73121099 73121098 73121209 21109194 21109193 21109304 111 TCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..:.:.::..::....x:...:.:.....:...----..::x:x.....::....x::....:x::....:.:x::...:.:.x....:.x....x.x.......::.... 33M4I74M 68/107 63.6% 111/94230402 0.0% 4/107 3.7% -26942693 -67287709 +3536 chr4 + 190214555 46178426 46178425 46178518 93 ATATATATATACACACACAAACATATATATATACACACACACATATATATACACACACATATACACACACACACACACACACATATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTA----------CATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:::::..:......:...x..----------.....:...:.x:...:xx...................x...:.x..:x... 31M10D52M 60/83 72.3% 83/94230402 0.0% 10/83 12.0% 37782638 NA +3037 chr4 + 190214555 46178466 46178465 46178516 51 ACATATATATACACACACATATACACACACACACACACACACATATATATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ......:........x....:..::........:...:..x..:.x..x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 17708099 NA +3285 chr4 + 190214555 46185503 46185502 46185568 66 TAATAAAAAAATA--AAATAAAATAAAATAAACAACTATGTAAAGGGAAAAAAAAAGCATGAAAAAAG chr4 - 94230402 78791782 78791781 78791849 15438554 15438553 15438621 68 TAATAAACAAACATTAAACAAAACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAG .......x...:.--...:....:....:........:.x:.....:.........:x.x::.:.:.. 13M2I53M 50/66 75.8% 68/94230402 0.0% 2/66 3.0% -32606279 -61624123 +3170 chr4 + 190214555 46187996 46187995 46188105 110 AAAATATATATATATATATACACACACACATATATATGTATTGTATATGTATATATATACATATATATGTATGTATGTATACATATATATGTATATATATGTATACATAC chr4 - 94230402 87985342 87985341 87985451 6244952 6244951 6245061 110 AAGGTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTTGC ..::.:.:.:.........x:.:......x:x..:.::x:X.x:x.xx.:.x:..x:x..:.:.....:...x.:.:....:.....::...x..:..:.x:x...x.:. 110M 65/109 59.6% 110/94230402 0.0% 0/110 0.0% -41797346 -52433056 +3031 chr4 + 190214555 46188065 46188064 46188145 81 TATGTATGTATACATATATATGTATATATATGTATACATACATACATATATGTATATATACATACATATATATGTATATAT chr4 - 94230402 17853465 17853464 17853545 76376858 76376857 76376938 81 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCAT ...x.:.x....:::.:.........:.:.x...xx:x.::..:....:......x.x.:....::..x.x.x....::.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 28334600 NA +3074 chr4 + 190214555 46188086 46188085 46188134 49 GTATATATATGTATACATACATACATATATGTATATATACATACATATA chr4 - 94230402 25493133 25493132 25493181 68737222 68737221 68737270 49 GCATATTTATTTACCCATACATACATATATGTACATATACAGGTATATA .:....x...x..:x..................:.......x::..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 20694953 NA +3446 chr4 + 190214555 46188088 46188087 46188174 87 ATATATATGTATACATACATACATATATGTATATATACATACATATATATGTATATATATACATATATATGTATGTGTATATATATG chr4 - 94230402 64944126 64944125 64944212 29286191 29286190 29286277 87 ATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG ...x...:.....x...x.....x............x::.:x:xx.:...x.x.x...x.::....::x.x.::......:...... 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% -18756038 -75474364 +3208 chr4 + 190214555 46188091 46188090 46188170 80 TATATGTATACATACATACATATATGTATATATACATACATATATATGTATATATATACATATATATGTATGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATAC---TG-----ATATAAACTTATATGTGTGTTTATATA ..:...x...:.x:.:.....:........:....::.....:---..-----.....x.:x.......:...x...... 43M3D2M5D27M 56/72 77.8% 72/94230402 0.0% 8/72 11.1% -6293145 -87937257 +3037 chr4 + 190214555 46188094 46188093 46188192 99 ATGTATACATACATACATATATGTATATATACATACATATATATGTATATATATACATATATATGTATGTGTATATATATGTGTATATATGTGCATGTG chr4 - 94230402 89016082 89016081 89016180 5214223 5214222 5214321 99 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTG ....::...:.:x.:...::.:::.:.::.x::::..:.:.:...:.x..::.....::..x....:....:.x.:.:x..:.:.:.:.:.x::::... 99M 54/99 54.5% 99/94230402 0.0% 0/99 0.0% -42827988 -51402414 +3184 chr4 + 190214555 46188097 46188096 46188176 80 TATACATACATACATATATGTATATATACATACATATATATGTATATATATACATATATATGTATGTGTATATATATGTG chr4 - 94230402 48167038 48167037 48167114 46063289 46063288 46063365 77 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG---GTAAATGTG .:..:...:xxx..............x........:x.:....::x:...:....:..:.::.:.:..---:..x..... 68M3D9M 54/77 70.1% 77/94230402 0.0% 3/77 3.9% -1978941 -92251461 +3282 chr4 + 190214555 46188119 46188118 46188197 79 TATATACATACATATATATGTATATATATACATATATATGTATGTGTATATATATGTGTATATATGTGCATGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATG--------CATGTGTTTGCATGTGAATATGTGTGT ..::.:...:......:.:::.:.x..........x.x......--------:......x.::.....x..:....... 44M8D27M 53/71 74.6% 71/94230402 0.0% 8/71 11.3% -25442016 -68788386 +3323 chr4 + 190214555 46211067 46211066 46211166 100 ACACACACACACACACACACACAATACATATGTATATATATACATACATATATATATACACACACAGATACACATGTATATA-ATACACATATATATGTAT chr4 - 94230402 33398780 33398779 33398880 60831523 60831522 60831623 101 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .:.:.......::.:....x..x...:.x......x..x.x:::.:.:.:.:.:........:.:.x.:...x.x:x.x.x.-.:.x.x...x........ 82M1I18M 66/100 66.0% 101/94230402 0.0% 1/100 1.0% 12812287 NA +55573 chr4 + 190214555 46248057 46248056 46250614 2558 ATATAGTAGCAGCTCTTTGCCCAAAGTATAGATAA---------GCCTTTTCTGTTGTCATACAGAAACTGTTATTTACAACTGTTTT-TACATATACACATATTTATAAATTTATA---ACTTATAG--TCAGACATTAAGGGGGCAATGCGGACTTTACAAGACAAATATTCTTAAAGTATCTAATAATGCATACCAT---ATAGAGCAATTTCATTGCTTGCCTTCTGGCATTGTGTACTTCCTTATACAATTGCACACATCCCTAAACTATACAGAAGAGCTATGCT-ATATTTAAATGTATAAGAAAATA-GGATATCTTCTATTTCAATGT-ATGAATAAAGTGCACATTTTAAA--ACTA--GGTGACAAAG----------AAAGTGTTACTGGAAGGGAATTAAAGAAATACATTTATTGGCTCATGTAACAATTTTATTTTATTAAGGATTATGGATTACCTCTTGTGAGGGAATTTT--TAATGTCAAGGCTGTCTTCTTGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGT-TTTATACAAGCATGCAAAGCATATAATAGAATCACATGGAAA-CAAAGAAATTTTAAAAATTAAATGAGGCAA--AGGAATAGCAAT------TTTTGCTGATATTTTGCTTATTTCCAT------AGATACTCCTTTTATTGATTTTA----------------------------TGAACATACCTATTT-ATGCACTATACTCAAATACTGTACAAAACTGCAATAAATGTTACTATTTGACTACTTATGTTTCTACAAAAACACCATCGTAAAGGTGCATGTTTTAGTAAAAGTCAACTAATAACTGCTAATGTACATGTCAATCAAAAGTATTTGAAGTTTGCCAAAAACTTTGAAT-CTAGGCATAATACACAATCTTTAACT---------TTTATTAGCATATTTCGGGGCATAAATAATATTTTAAGATATTAAAAGAAAAATGAATTTTACCCATTAATAACTAGTAATTATATAAAATTTAAAATTGTGTTTTCTAATTTAGCTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTGCACGTGAAATA-ATCCACAATCTATTGGTGATGTTTTAAAGTTGCAGTGTAAAAATG---TTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGAAATTTAAAGTTGCAATTTACAAAAGCAGATTTACATTAATTCTTATCTGAAAGAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATTAGTGGCTTCTGAGTCTTGAAAA-------GAAGCCTT--AAGGCAGAATTTGCAGTAA-AC--AGGAAAGAGGAGAATCATATAAGTGTTTGTCATAGTGTGGGGCACCTATGAATTCTCATCAGTGGGAGTTTTTGGCA------CAATTTTCTAATC-----CAATATGCATGTTGCTCCACAGCAACCAAACTGGATGCTTTTTCCAGTCTCCAGCACCCGTAAAATTTAGCTGATCAATTTCAATACAACACATACCTGGAAATGTTAAGACACATTTCTTTTCTTTTTTTTTAATTAAGGTAGTTTCCAATGATTAAAATAAATTGTAGGATTTCAATTATTACTTTCAAATAAACTCTGAAGCTAAAAATGTAATGACCATGACATTCCAATAG---TTATTACATCGTAGGCATAATTAACATCCTTTCGGGCTGACT--------CATAATTATTTGAGCTTGTCATGCTGTAATATGTACATGGCTATAGATACTATATAGAGTAATTCATAGCTGATTTCAAATCTCTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATGAACAGAGCTGATGTCAGATACAATGTTTGTTACTTCAAAGGATTCATCTAGGAATGACAATGTTATCTTCCATCATAATTAAGCAACAGTAGAAAATACCCCTACTTAAGAGCTAAACCAAAAGGGTCCACAAAGGGTTGTACAGGATCCCCATTTTCATCTCATTTGGAAGAATAGGAAATTAATCAGGTCACTTGAAATTCACTTTAAATCAGGTCCTA-GGGTAAATCTTTAAAAAAGGCAATGGCTGTTTTCGCATGGAGTGCTTTCTGTCTGCAGTTCCATGAGTTAGCAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCAGTTATTAGTCAGACTGTACATAGCA---AAACAAACCAAATTTAATGTTGCTATACATCCCAAAGATAACATGGGTCTCAATTCAAGG----ACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAGCCCAGTAAACTAAATTAAAGGTACCAAACAAAACTGGAAAAACTATTCTGGACATTCTGTCAATTTTGCTAACACTGTTGAAAGTTTTCTTTGCTTCAGCTGGCTTGTTTTCTGGCTT---CTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAAGCCTTTTCTTTTTTCTATTGAAAA chr4 - 94230402 25223410 25223409 25225868 69004535 69004534 69006993 2459 ATACAGTCAGAGCCCTTTGCCAAAAACAGAGTTAAAAGTGAAGGGGATATTCTACAGTT---------CTAATATTTACAATTTTTTTGTACATATGTACATATTTATATATTTATTTGTACCTGGAGAATGTGACAATAAAGGGataattaataatt-acaaataaaacattttaaaaatGTATAAC----TATATCATGAAAGAAACCTCTTTTATTGCTTGCCTTCTAGCCTGATGCTCATAATCACACTATTGCACACATCTCCATAATACATGGAAGATCTACGtttatatataaatatatatgaaaataaggatatttttaattttaattttatGAGTAAAGTGCTCTTTTTTAACTACTGTTGATGAGAAAGGCTTAATCTGAAAGT-TTAATCAGAGGGACTTAAAGGGATACACACCTTGTCCATACTTCTCCCTTTATTTTGCTGA-------------CTTCTTT-------ATTTTGCTGATGTTAACTCTGTCTTAACTATTAATTCTATTCATAAAATGCATTTGTGACCTTGGCATCTATACAGTCACACAAAGTACAAAACAGAATCACATTAAAAGCAAAGAAAATGCAAGAA---AATAAAACAACAAATAAAAGCAGTGTTTCTTTTTGTTGTT-TTTTGCACATTTCCATGTCTTAAGATACTCTTTTATTTGATTTTAGAAATATTTTTACAACTTTGTTAAACTCTGAACATACCTATTTTATGCACTATACTCAAGTACTGTACAAAACTGCAATAAATGACACTATACGACTACATATGTCTACTAGAAGACATCATCATAAAGGTGTATCTTTTTCTAACGGTCAACTAATAACTGCTAATGTATGTGTGAATCAAAA-TATTTTTGACTGGCCACATATACTAAATTCTAAATGCAGTACACAATTACTACTTACGCCATGATTTACCAG-GCCTTTAGGGGCATAAAGAATCTTTGCAAAGGCTCAGATGAAAAACAGTTTTACTGATCAGTATTAAATGTTCATATAAAATTGCAAATGG------CAGATCCAATTTTGT---------------------------TATATTCATATATATGAAATACAGTTGATACCTACTGATGATGCAT-GACCTTTTATTAAAAAAATAACATTCAAATCTTAGCAAAACCATTTCTAGTATACAAAGTTGTTGGAAATTTATGTCAGCGAAATGTAAAGTTGCAATTTACAAAAGCAG-----CAGTAAATTTTATTCACATGGACAGTTTCCTGAACTTAAA-------TAATGAATTCTTTTTTCCTGTCAAAACAATGCTTTCCGGG----AAAAATGCAGGCAAATCCTTTAACGGCAGGTTCTAGAATAACACTGAGCAAGGAAAAGAATCTATTATGTTACTGATATAGTT---AACTCCGAAAAATT--------TGAGTGCTTTTATGAACCTGACAATAATCTGATTAAGAACAAAAT-CAAGAAGCAGAAAAATCAAGAAACAGAAAAAT----CCAACTTTGTTGAGCCAGACAACCTGGTTTAGCAACATCGAATTAAGAAA-ACAGTGAAGAGTGAAAGTTGATTAATATTAGAAATCT--GATCAACACTTTTCTC------TGAAATTAACTGTAGTAATTTA-TTAACAACTTCAAACAGGA-CAGAAGTAAGAAACCTG-TGGCTTTTGCAATATAGTAGCCTTTACTACCTCCTCAGCCTAACTAGTATCC----AGAATTACTGTGAATGACAGAACTGTATGACCTC--CGTACTCT--TATGTACATGGGTACTGCTACTGTATGAAACAATT-ACA-CTCTTTTAAAAA----AATCATTTTTAAATG-ACAATTCCTTTAATTAAAGTAGAA--------------------------------------------TTAGTTACTTTATAGaa---------------------------------------------------aaatattttaactttaaa-ttaaaaaaataCTGTTCCTAAATAATTATGTAGGATCAT-ATCTTTATTTC-TTTGTACGGAGAGAATATAATTCTGTATATTTGAATTGTAGTTTAACAGAGCTCCCCTGGGTATAACTTTTAAAGATT---TGGCTATATTTGCCATGGGTGCTATCTGTTTACAGACCCATGAATTTACAC-TGTGTCCCTCCTTTGGAGATACACAGATAAGACAT----CTATATACACTCTGTACATAATGGTTCACAGATTAGCAGTTATTAGTCGTACTGTACATAGCGGACAACCTATCTGATTAGAACGATGTTTTAAGTCCTCAGTGCAATTCAGGTTTTAGGTTGATGGTGCAAAGCCAAGTAAGACAGGCTCCCTGTTTAAATATGTAGCCCAATACACTAAATTAAAAGTACCAAATAAGACTGGAAACACTATTCTAGACATTCTGTCAATTTTACTAACACTGTTGAATGTCTTCTTTGCTTCCTGTGGCTTTGCTTCTGGTTTTGCCTTGTTGGGTTCTGCAGTTGTAGCGCTCTTGGAGATGGTGGGTAGCACTGAGTCCTTGGTAATATTTGGAGCATAGTTGGCAACAGCCACTGCATAGGCATTGTTTTTCTTAATGACAGATGCTTTTTCTTTTTTCTATTAGAGA ...:...x:x...:.......x...::.x..x...---------.xx.x....::x..:---------..:x.........:.x....-.......::...........x......x---..:.:x..--.xx....x...:...::...xx:x.x..-....:xx...:...:.x...:.:.x...:----:...:...---.x.:.x.xx...:..............:..x.x:..:x.x.xx.:.:..x............:.:.x.x..:.::.....x...:.:.-....x.....:....x.......-......:..:x....:...x.-....:........x.x....x..--...:--.:...x....----------.....-...x.x::.....x......::.....:x:x...x.:xxxx.xx:xx:........::.:.-------------.:....x-------.....--.:....:..xx.......xx:x::x.....::..x....:x.................:-.:......:x..::.....:.:.x..:..........x:...-........x.x:..:..---...:.::...--.:x..x....:.------.....:..x.-......x:........------........:...xx.........----------------------------...............-...............:........................x:.....x:......x.....:.x:xx:..:...:....:........:..x....xx...x:.......................::...x........-.....xx:::.x....x.x.:x:.:...-...:::::.:........:x:..x:.---------....::..-::x...x..........x...x...xx.:.x::.x.:.x:....xx.:......:x..:.:..x:x.:.:x.:..........xx....x.------.x:..::.::.x...---------------------------...:..::.::.::.......-.x:::xx.:...:..:.....:x.-:.xx..x:.x.:x......:---.....x:....x.......x:....:..........:.....x......:x...........x........................-----..x...x.:....:::x.x.:..x.:..:.xx..xxx...-------:...x..:.x:::......x.xx..x:.:..x:...:.:.----:....-------:..x....--.x.....:x.:.:x.:...-..--..x..:..::......xxx..x..xx:..x:.....x---::.x..x.x:....--------..:.x.:....:xx.------....xx...:..:-----...x..-..x.xx..xxx.x.::x.xx....x.:.x:x.----...:::.:xxxx.x..:x.x..::.:.:.x.x...:x..:.xx:..x.x.-..xxx...:x..x..:::xx...xx.x..xxxxx.:.--:..:..x::xx..::.------.:....x..:.....x.x..:.-...x:.x:......:.::x-.x....:x.:...:x.:-..:.:x.x:..x.x:.:...---...:...x..x.x:..x...:..::....----:.:x.x...--------..x..:.:.x...x..:--.:.:..x.--...........x..:x.x....:...::.::....-.:.-..xx...x...x----.:.:x..:...x:..-..x.xx.:.::.....x.x...x.--------------------------------------------..x.......:.x..:.---------------------------------------------------.....::::x....x.:.-:....xx..x.xx..:.x:...x::..:.::......x:-..:..:..:..-....x.x.:.x..:.x..x.x..x.xx:.:.....x.x:.x.....xxx..x...:x-.....x.x....x...:.xx---.....:.x..:..xxx.:.....x.....:.:...x:......:..x:..x-..::.x:....x..::..:.x:..x.:....x:..----.........:x........:x...x.....:.................:x............:---..x.x.x.::.x.xx..:.x..:.x..x:...:x.:x::..:x::...:.:.:x.::.x.----.xx.x.xxx...x.....:..:....................:..x...........:........:..:........x........:.................:..............x..:...........xxx......xx:......:..---..............xx..x..x..:................:x..x....::..:..x.x..x...:..:.....:....................:..:.....:.x:x.x..:..:..x..:................::.:. 35M9I15M9D20M1I28M3I8M2I28M1D29M4D8M3I88M1I23M1I21M1I23M2I4M2I10M10I5M1D61M13D7M7D5M2I59M1I42M1I17M3D10M2I12M6I10M1D16M6I23M28I15M1I140M1D28M1I26M9I8M1D91M6D15M27D21M1I24M1D20M3I87M5D40M7D40M4D5M7I8M2I19M1I2M2I37M3D14M8D15M6I13M5I6M1D32M4D50M1D37M2D16M6D22M1D19M1D17M1D20M3I29M4D9M8I17M2D8M2D35M1D3M1D12M4D15M1D24M44D17M51D18M1D39M1D11M1D57M1I20M3D51M1D35M4D63M3I60M4I156M3I145M 1608/2318 69.4% 2459/94230402 0.0% 381/2318 16.4% 21024647 NA +9431 chr4 + 190214555 46250319 46250318 46250674 356 CCCCTAATA-CAGGTTCTCTGTTTAAATATGTAGCCCAGTAAACTAAATTAAAGGTACCAAACAAAACTGGAAAAACTATTCTGGACATTCTGTCAATTTTGCTAACACTGTTGAAAGTTTTCTTTGCTTCAGCTGGCTTGTTTTCT------GGCTTCTTGTTGGGTTC-----TGGC----------GTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAAGCCTT---TTCTTTTTTCTATTGAA----AAATACAAAAATTAACAGAGTGTGGGTTGAGTCTGCTACT-------TAACATTTTCT----AAAGTCCACTT chr4 - 94230402 83337552 83337551 83337946 10892457 10892456 10892851 395 CCTTTGATAGCTGACTCTCGGTTTACGTAGGTGGCCCAGTAGACTAAGTTGAAAATGGCAAAGAGGACTGGAAAGACGATGCGGGACATCTTGTCTACCTTGCTGACGCTGTTGTACGTCTTCTTACTCTCTGGGAGCTTCTCCTCTAAGCGGGGCATCTTGGGGGGTACGTTGGTGGCAGTAGCAGTGGCAGCAGCACTCTTGGAGATGGTGGGCAGGCCAGGGTCCTTGGCAATGTTGAGGGGATATGTGGTGCCAACTATGTTGTAGGTGTTGTTGGTTTTCTTCACTAGTGCCACTGGTTCTTTTTTCTAGGGAAGGTGGAACAAAAAACATAACAGAG-ATGAGGTGACTGTAGAACTGCAAGGGGAACATTTTGTCCTCAGAGTTCACCT ..::.:...-.x.::....x.....x:..x..:........:.....:..:..::.:x....x.::........:..x..x.x......::....x.::.....:..:......x.x..:.....xx::..x.xx:....x.::...------...x.....xx....x.-----....----------.::.:x...................:x..:x.x..:..:..x.x..x:..x:...x...xx...::x..:.:.:xx::..:.:......xxx.x..x.x..x::x...x:---............xx...----:..:.x....xx........-:..:.x...x.x.:xx...-------x........x.----.:...:...:. 9M1I137M6I17M5I4M10I110M3I17M4I20M1D19M7I11M4I11M 241/355 67.9% 395/94230402 0.0% 41/355 11.5% -37087233 -57143169 +16435 chr4 + 190214555 46261920 46261919 46262164 245 ACTTACCTTGTCATTTACTACACTCTTCCCATCCCAAGCCCATCCTCTTTTGGTGAAGTAATTAACAGTTGCAAATTCAATTAGGGCAGAGAACACAAATGCATAACAAACAGCAATAAACCAGTCCATGGCAGTTGCATAAGCCACTTTGGGGAGAGAATTCCGAGCACTGATGCTTAGAGTTGTCATTGTTAGGACAGTTGTTACTCCTGCAAAAGAAAAGATAGGAATCGAAAACATCAATA chr4 - 94230402 25229595 25229594 25229837 69000566 69000565 69000808 243 ACTTACCTTATCATTCACTACACTTTTTCCATCCCAGGCCCATCCTCGTTTTGTAAAATAATTAACAGTTGCAAATTCAATTAATGCAGAGAATACAAATGCATAACAGACAGCGATAAACCAATCCATAGCTGTTGCATATGCTACTTTGGGGAGTGAATTTCGAGCACTGATGCTCAGCGTTGTCATTGTCAACACAGTAGTAACTCCTGTAAGGGGATAAAAAAAAAAC--AAACATCAACA .........:.....:........:..:........:..........x...x..:..:.........................:x........:..............:.....:........:.....:..x........x..:...........x.....:..............:..x...........:.:x.....x..x.......:..::.:.x.:.x.::..x.--.........:. 232M2D11M 204/243 84.0% 243/94230402 0.0% 2/243 0.8% 21032325 NA +11526 chr4 + 190214555 46261925 46261924 46262150 226 CCTTGTCATTTACTACACTCTTCCCATCCCAAGCCCATCCTCTTTTGGTGAAGTAATTAACAGTTGCAAATTCAATTAGGGCAGAGAACACAAATGCATAACAAACAGCAATAAACCAGTCCATGGCAGTTGCATAAGCCACTTTGGGGAGAGAATTCCGAGCACTGATGCTTAGAGTTGTCATTGTTAGGACAGTTGTTACTCCTGCAAAAG------AAAAGATAGGAAT chr4 - 94230402 83345585 83345584 83345816 10884587 10884586 10884818 232 CCTGGGCCTCCAGCACCTTCTTGCCATCCCAAGCCCAGCTGCGCTTGGTGAAGTAGTTGACAGTGGCAAATTCAATCAGCGCAGAAAACACAAAGGCATAACAGACGGCTATGAACCAGTCCATGGCCGTCGCGTACGCCACTTTAGGTAACGAGTTTCTTGCGCTGATGCTTAGTGTGGTCATGGTGAGCACAGTGGTGACACCTATGGAAACACAGCAGAAGACAAGGAT ...x.x.x.::.x:..x:....x..............x.:x.x:...........:..:.....x...........:..x.....:........x........:..:..x..:..............x..:..:..x........:..x.:x..:..:.xx..:...........x..x.....x..x..x.....x..x..x...::::..:------.:....:.:.:.. 213M6I13M 170/226 75.2% 232/94230402 0.0% 6/226 2.7% -37083660 -57146742 +9333 chr4 + 190214555 46261942 46261941 46262188 247 CTCTTCCCATCCCAAGCCCATCCTCTTTTGGTGAAGTAATTAACAGTTGCAAATTCAATTAGGGCAGAGAACACAAATGCATAACAAACAGCAATAAACCAGTCCATGGCAGTTGCATAAGCCACTTTGGGGAGAGAATTCCGAGCACTGATGCTTAGAGTTGTCATTGTTAGGACAGTTGTTACTCCTGCAAAAGAAAAGATAGGAATCGAAAACATCAATAGGTACTAGCAGGACAGCATGGGAA chr4 - 94230402 25390997 25390996 25391227 68839176 68839175 68839406 231 CTCTTTCCATTTGAA----------TATTAGTAAAATAGTTGACAGCAGCAAACTCGATAAGAGCAGAAAACACAAAGGCAAAGCAGACTGCTATGAACCAGTCCATGGCAGTAGCATATGATACTTTTGGCAGTGAGTGTCTTGCACTGATGCTCAGCGTCGTCATTGTCAACACTGTGGTTATTCCTTCAAAGAAACA------AAACAAAAGCACTGCTGAATGCAAGTAAATCAGAGAGAGAA .....:....::x..----------.x..:..:..:..:..:....:x.....:..:..x..:.....:........x...x.:..:..x..x..:.................x.....x.x:.....x..x..x..:.x:.xx...........:..x..:........:.:x..x..x....:....x....::..x.------..x.:...:..:::x.:::.:.x..:.::x...x:x.:... 15M10D175M6D41M 162/231 70.1% 231/94230402 0.0% 16/231 6.9% 20870945 NA +3413 chr4 + 190214555 46262878 46262877 46262962 85 CAGAGCAAAAGTCCGTTGAAAGAAAGAACGAAAGAAAGAAAG--------AGAGAGAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAG chr4 - 94230402 32280597 32280596 32280689 61949714 61949713 61949806 93 CAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAG ..:..:........::.:...:...:..x............:--------:..:...:x...:.x.:..x.x.....:.:x.x..x.:x.... 42M8I43M 60/85 70.6% 93/94230402 0.0% 8/85 9.4% 13982281 NA +3036 chr4 + 190214555 46273341 46273340 46273400 60 CTTCTCTGTCCTCACTTTCTTCTTTCTCTCTCTCTCCCTCTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 60208495 60208494 60208554 34021849 34021848 34021908 60 CTTTCCTGTCTTCATTTTGAATCTTTTCTCTCTCGCTGCGTGTGTGTGTCTGTGTGTGTG ...::.....:...:...xxx::..:........x.:x:x.........x.......... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -13935154 -80295248 +11659 chr4 + 190214555 46303450 46303449 46303614 165 ATTCACTCACCAAACACAGTTCTTGCAGGCACAGATTCTCTGTTAAGCCAGAATGAAACTTGGGAGAGAATGACAGTCATGATGCAAGGCAGATAGGTTTGAATCACAAAATACCCAATTTTTCTTTTCAGGTGGAAATGAGCTGTCATTACAGTATATTCACCT chr4 - 94230402 25237066 25237065 25237230 68993173 68993172 68993337 165 ATGTACTCACCAAAAACTGTCCTGGCCGGTACAGATTCTCTGTTCAGCCAGAATGAGACTTGAGAGAGAATGACAGTCATGATGCATGGGAGGTATGTCTGAATGACAAAATAACCAATTTTTCTCTTCAAGTGAAAATGAGCCGTCATTACTGTATATTCACCT ..x:..........x..x..:..x..x..:..............x...........:.....:.......................x..x..:..x..:.....x........x...........:....:...:........:........x............ 165M 142/165 86.1% 165/94230402 0.0% 0/165 0.0% 21066384 NA +7107 chr4 + 190214555 46303451 46303450 46303693 243 TTCACTCACCAAACACAGTTCTTGCAGGCACAGATTCTCTGTTAAGCCAGAATGAAACTTGGGAGAGAATGACAGTCATGATGCAAGGCAGATAGGTTTGAATCACAAAATACCCAATTTTTCTTTTCAGGTGGAAATGAGCTGTCATTACAGTATATTCACCTGGAAGAAA--AATTTAAGAAGCTCAAGGAGTAATAGTCAATACTTTGAACATTTAGGAAATAGAAGGGATCAGAGGTAGAA chr4 - 94230402 83282377 83282376 83282616 10947787 10947786 10948026 240 TTCTCTTACCGAGGGATGTCCTGGCTGGTGTAGAGTCTCTCTTGATCCAGAAGGAAACCCAGGACAGAACAACAGTCAGGATGCAGGGAATGTAGGTCTGAATGGCAAAATAACCCATACGTCTACTTAAGTCAAAGGAAACCGTCATCACCATGTACTCCCCTAGAAAAAAAGAAGTGAAAGAGACATTGGAATCATAACATGTAGCTTA-----CTAAGGTACAGAAAGCTTCAGAATTTGAA ...x..:...:.:x:xx..:..x..x..:::...x.....x..:.x......x.....:::...x....::.......x......:..x.x:.....:.....x:.......x..x..x:x...x:.:.:..x:..:x:.:.:.....:..x:.:..:..x...:...:...--..x.x..::..x:xxx...:.x...::xx:..x:..:-----:..:.:x.:....:.xx.....:x.x... 172M2I37M5D29M 151/238 63.4% 240/94230402 0.0% 7/238 2.9% -36978926 -57251476 +9403 chr4 + 190214555 46303454 46303453 46303637 184 ACTCACCAAACACAGTTCTTGCAGGCACAGATTCTCTGTTAAGCCAGAATGAAACTTGGGAGAGAATGACAGTCATGATGCAAGGCAGATAGGTTTGAATCACAAAATACCCAATTTTTCTTTTCAGGTGGAAATGAGCTGTCATTACAGTATATTCACCTGGAAGAAAAATT--TAAGAAGCTCA chr4 - 94230402 83348006 83348005 83348191 10882212 10882211 10882397 186 ACTCACCAAAAACTGTTCTGGCGGGGACGGACTCCCTGTTCAGCCAGAAGGAGACCTGGGACAGGATTACGGTCATGATGCAGGGCAGGTAGGTCTGGATGACAAAGTACCCGATCTTCCTCTTGAGGTGAAAGTGCGTGGTCATGACAACGTACTCCCCTAGGGACACAACCAGTTAGAAGCACA ..........x..x.....x..:..x..:..:..:.....x........x..:..:.....x..:..x..:...........:.....:.....:..:..x.....:.....:..:..:..:..x.....:..:..x.:x.....x...:::..:..x...:.:::x.x..::--.x......x.. 173M2I11M 136/184 73.9% 186/94230402 0.0% 2/184 1.1% -37044552 -57185850 +9915 chr4 + 190214555 46303456 46303455 46303633 178 TCACCAAACACAGTTCTTGCAGGCACAGATTCTCTGTTAAGCCAGAATGAAACTTGGGAGAGAATGACAGTCATGATGCAAGGCAGATAGGTTTGAATCACAAAATACCCAATTTTTCTTTTCAGGTGGAAATGAGCTGTCATTACAGTATATTCACCTGGAAGAAAA----------ATTTAAGAAG chr4 - 94230402 25395867 25395866 25396054 68834349 68834348 68834536 188 TTACCAAATACAGTTCTAGCTGGTACAGATTCCTTATTTATCCAAAATGAAACTTGAGAAAGGATCACGGTCATAATGCATGGGATATACGTCTGAATCATAAAATAACCCATTTTCCGTCTGAGGTGGAAATATACTGTCATAACAATATATTCACCTAAAAAAAAAGAAAAGAAATATTTAAAAAG .:......:........x..x..:........::.:..x.x...:...........:..:..:..x..:.....:.....x..x.x...x..:.......:......x..x.....:.x.:.x..........:x:.......x...:...........::..:....----------......:... 168M10I10M 140/178 78.7% 188/94230402 0.0% 10/178 5.6% 20907589 NA +11247 chr4 + 190214555 46305558 46305557 46305737 180 TTTTACTAACCTGTACTGGATTTAATTGTCTCCTTTCCGATTGATTGGCCCAGCAGGTCATATTGATTTAACCTAGAGCCATCAGGAGCAACCTGTACTGAATCAGATGCATTGTAAGTCCAAATATAAGTGACCTCTGAAGTTGTATATGCATCTATAGGAAATCAGAAAAAATATTTT chr4 - 94230402 25238013 25238012 25238191 68992212 68992211 68992390 179 TTTTACTAACCTGTACTTGATTTAACTGTCTCTTTTCCAATTGTTTGGCCCAAAAGATCATACTGATTCAATCTTGAACCATCTGGTGCCACCTGCACAGAATCTGAAGCATTGTAAGTCCAAATATATGTCACTTCTGATGTTGTGTATGCATCTGT-GGAAATAAGATATAATATTCT .................x.......:......:.....:....x........:x..:.....:.....:..:..x..:.....x..x..x.....:..x.....x..x....................x..x..:.....x.....:.........:.-......x...x.x......:. 158M1D21M 149/179 83.2% 179/94230402 0.0% 1/179 0.6% 21067545 NA +5326 chr4 + 190214555 46305566 46305565 46305732 167 ACCTGTACTGGATTTAATTGTCTCCTTTCCGATTGATTGGCCCAGCAGGTCATATTGATTTAACCTAGAGCCATCAGGAGCAACCTGTACTGAATCAGATGCATTGTAAGTCCAAATATAAGTGACCTCTGAAGTTGTATATGCATCTATAGGAAATCAGAAAAAAT chr4 - 94230402 83349312 83349311 83349478 10880925 10880924 10881091 167 ACCTGTGCTGGATCGAACCATCTCTGTCCCAACGACATGGCCCAGCAGGTCATATTGGTTCAGGCGAGATCCGCCCTTTGCAACTTCCACTGATTTATCCTTCCCCAGGGTCCAGGTGTAGATTACCTCTGTCTTTGTGTAGGCATCTGTGGAGGAAAAAGAAGAAT ......:......:x..:::....:x.:..:.:x:xx....................:..:.:x.x...x..::.xxxx.....:.x:.....x.:.xx:x:x::xx::.....::.:..::.x.......xxx....:..x......:.:.:::.xx.::..:... 167M 102/167 61.1% 167/94230402 0.0% 0/167 0.0% -37043746 -57186656 +5121 chr4 + 190214555 46310147 46310146 46310261 115 ACATGTAACTTCATCCCTGTA-CTTACAGCTGCCAAATTTCAGAGGACATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTAAGCCTAAAA chr4 - 94230402 25399118 25399117 25399233 68831170 68831169 68831285 116 ACAAGAAATTTCATAATTGTAACTTACAACTCCCAAATTTGAGAGGACAAGCATGACCATCCATGGGAAAATCCACTAATCTCATGGGACACTCTGCACTTATTGTAAGCCTATAA ...x.x..:.....xx:....-......:..x........x........x.x....x.......x..:......x.:..x:x...x..:..:..x..x:xx.:..........x.. 21M1I94M 86/115 74.8% 116/94230402 0.0% 1/115 0.9% 20911029 NA +10640 chr4 + 190214555 46310164 46310163 46310434 271 TGTACTTACAGCTGCCAAATTTCAGAGGACATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTAAGCCTAAAAGTC-AAAATTTCACTATTTGTTTAAGTATATTGGTAAGTCAAGAAAAATCACTCGTCATTACTCTCAACAGACTCGAT---------AGAGGTAGAGCATTAATCACAGCAGTAGGCTCATTCATATTTAAATAATCTTTTGTTCATTCATGTTTAGGTGATCCCTCGGAAGACATTGGCGTA chr4 - 94230402 25241191 25241190 25241467 68988936 68988935 68989212 277 TACACTTACAGCTGCCAAATTTCAGTGGGCATGAGTGAGCATCCATAGGGAAGTCCTCCAAGTGCATTGGACATTCGGCTTGGACTGTAAGCCTAAAAGGCAAAAAGATCACTATGCATTTAAGTCAGTTAGCAGGACAAG-AAAATCAATCCCACAAAAAATGAACAG--TTAATGTGTATTTAGGAGATAAAACTGaaatttta-tattaaactaattaaaatttaGATCAGCTCTTGCTTCCTCCCTTTTATGTGCTCCTTTGGAAAGCACTGACATA .::......................x..:.....:...........x.....:.................:.....:.....:................x.-....xx.......x::.......xx:..:.:.:.x....-.......x..x:xxxx.xxx.x.....--.::..---------:...:..:.:.xxx...:x:.-:.x..::..x...x.x.....:..x.x..:...:.:x:..x:x....x...x...:.:....::..:..:.:.. 101M1I39M1D27M2D5M9I21M1D74M 194/267 72.7% 277/94230402 0.0% 14/267 5.2% 21068973 NA +6555 chr4 + 190214555 46310165 46310164 46310268 104 GTACTTACAGCTGCCAAATTTCAGAGGACATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTAAGCCTAAAAGTCAAAA chr4 - 94230402 83353631 83353630 83353734 10876669 10876668 10876772 104 GTACTTACAGCTCCCAAATTTCAGCGGGCATGCGTGCACATCCATTGGGAAGTCCTCCAGGTGCATGGGGCACTCTGCATGAATGGTTAGCCTACAAGACAGAA ............x...........x..:....x:..x:.............:.......:......x.....:..x..x....:x..x......x...x..:.. 104M 85/104 81.7% 104/94230402 0.0% 0/104 0.0% -37043466 -57186936 +12202 chr4 + 190214555 46312479 46312478 46312718 240 CAAACCTAAAAACATACCTCATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTACTGATTTTTTCCCATTGTGAAAAAAGGTATCTGGAGTCCAGATTTTGCTAGCCATTAAATTGTTTAGTCGAAGGATATTCATAGGACCTTTAAATTTTAAACGTTCATCTTTCCATTTTTGTCGAAAGAAAACATCAATTGTATATTCCT chr4 - 94230402 83361928 83361927 83362167 10868236 10868235 10868475 240 CAGAGCCACGAACTCACCTCATTGTATACAGGAGCGTGCCGTTATCCACCAGGCGCAGCAGCTTGTTGGGTGTTGTCATGTTATGGGCAACAGATTTCTTCCCATTGTGGAAGAAAGTATCAGGAGTCCAGATCTTACTGGCCAGCAGGTTGTTCAGAGGAAGGATCTTCATGGGACCATCGAACTTCAGCCTCTCATCTCTCCAGGATTGCCGGAAAAAGACATCAATGGTGTATTCCT ..:.x.:.x:...x:.......x........x..x..x..:.:....xxx.xx..x....:...:..x..::.......:.....:..x..x.....:...........:..:..:.....x...........:..:..:....x:.::.....:..xx.......x.....:.....x.::..:..:.:x.x:......:....xxx...:..:..:..:........x..:....... 240M 176/240 73.3% 240/94230402 0.0% 0/240 0.0% -37049449 -57180953 +17328 chr4 + 190214555 46312486 46312485 46312733 248 AAAAACATACCTCATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTACTGATTTTTTCCCATTGTGAAAAAAGGTATCTGGAGTCCAGATTTTGCTAGCCATTAAATTGTTTAGTCGAAGGATATTCATAGGACCTTTAAATTTTAAACGTTCATCTTTCCATTTTTGTCGAAAGAAAACATCAATTGTATATTCCTGAAATAAAAAATAGA chr4 - 94230402 25244566 25244565 25244813 68985590 68985589 68985837 248 AAATACATACCTCATGGTGTACAGAAGAGTTCCATCATCTTGAATTCTTAGAAGCTTGTTAGGCATTGTCATGTTATGAGCGACTGACTTTTTCCCATTGTGAAAAAAAGTATCTGGAGTCCAGATTTTGCTGGCCATTAAATTGTTCAATCGAAGAATATTCATTGGGCCCTTAAATTTTAACCGCTCATCCTTCCATCTCTGACGGAAGAAGACATCTATTGTGTATTCCTATAATGGAATAAAGA ...x..............:.....x.....:........:.......xx..x.:...:..x...........:........x.....:....................:.......................:..............:.:......:........x..:..:...........x..:.....:......:.:..x..:.....:.....x.....:.......:x...::..x.x... 248M 210/248 84.7% 248/94230402 0.0% 0/248 0.0% 21067920 NA +9762 chr4 + 190214555 46312492 46312491 46312719 228 ATACCTCATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTACTGATTTTTTCCCATTGTGAAAAAAGGTATCTGGAGTCCAGATTTTGCTAGCCATTAAATTGTTTAGTCGAAGGATATTCATAGGACCTTTAAATTTTAAACGTTCATCTTTCCATTTTTGTCGAAAGAAAACATCAATTGTATATTCCTG chr4 - 94230402 25399326 25399325 25399553 68830850 68830849 68831077 228 ATACCTCATTGTATACAGGATAGTGCCATTCCTCATTATTCTGAAGAGTTTATTTGGGGCCGTCATGTTATGTGCAACAGACTTTTTCCCATTCCTGAAGAAAGTGTCAGGAGTCCACACCTTCGAGACCATCAAGTTGTTAAGTCTTAAAATTTCAATAGGGCCATCATATTTTAATCTTTTGTCTACCCATGTCTGACGGAAGAAGACATCCATTGTATACTCCTG .........x........x.x...x....:x::.xxx....x:.:x.::........x:::.....:.....x..x..x..:...........x:x:..:..:..:..x........x.::..xxx::....:..:.....x....xx.::..x.:x.....:..x.:.x.......x.x..::...x:....x.:..x..:.....:.....x........:..... 228M 159/228 69.7% 228/94230402 0.0% 0/228 0.0% 20913166 NA +4511 chr4 + 190214555 46332598 46332597 46332707 110 TTTAAT----GAAAAACTCACCATATCTGTATCTGAGACAGGGCCAAAACTGGTCACGTAGATGTTAGTGAAGACTTCAGTAATACTGTCTAATATGAGAAAAGAGATTGAATA chr4 - 94230402 25402437 25402436 25402550 68827853 68827852 68827966 114 TTTAATTCCAGCAATACATACCATTTCTACATCAGAAACAGGTCCAAAACTGGTGACATATATATCTGTTTTGACTTCAGTAACAGGACCTAATATATGAAAAGGAAGTGAGCA ......----.x..x..x:.....x...::...x..:.....x...........x..:..x..:.:x..xxx...........:.xx::.......:x......::.x...::. 6M4I104M 79/110 71.8% 114/94230402 0.0% 4/110 3.6% 20930161 NA +6983 chr4 + 190214555 46332605 46332604 46332700 96 AAAAACTCACCATATCTGTATCTGAGACAGGGCCAAAACTGGTCACGTAGATGTTAGTGAAGACTTCAGTAATACTGTCTAATATGAGAAAAGAGA chr4 - 94230402 25252745 25252744 25252840 68977563 68977562 68977658 96 AGAAACTCACCATGTCTGTGTCTGAAACAGGTCCAAAACTGGTCACATATATGTTGGTGAAGACTTCAGTAATACTATCTGATATAAAAAGAAAAA .:...........:.....:.....:.....x..............:..x.....:....................:...:....:.:..:.:.:. 96M 81/96 84.4% 96/94230402 0.0% 0/96 0.0% 21079860 NA +5211 chr4 + 190214555 46332609 46332608 46332700 92 ACTCACCATATCTGTATCTGAGACAGGGCCAAAACTGGTCACGTAGATGTTAGTGAAGACTTCAGTAATACTGTCTAATATGAGAAAAGAGA chr4 - 94230402 83364744 83364743 83364835 10865568 10865567 10865659 92 ACTTACCATGTCTGTGTCTGAGACGGGGCCGAAACTTGTCACGTAAATATCTGTCTTGACTTCAGTTACACTGTCTGGaaaaaaaaaagaaa ...:.....:.....:........:.....:.....x........:..:.:x..xxx.........x.:.......::x.x:.:......:. 92M 70/92 76.1% 92/94230402 0.0% 0/92 0.0% -37032135 -57198267 +3101 chr4 + 190214555 46356975 46356974 46357034 60 GGGTTTGTTTTTTTTTTGTTTTGTTTTGTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGCT chr4 - 94230402 16244373 16244372 16244432 77985971 77985970 77986030 60 GGCTTTTTTCTTCTTTTTAATTATTTTTCCTTCGTTGTTGTTGTTTGCTTGTTTGTTGTT ..x...x..:..:....xxx..:....x::..:..............:......x...:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 30112602 NA +3012 chr4 + 190214555 46357000 46356999 46357035 36 TTGTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGCTT chr4 - 94230402 14581399 14581398 14581434 79648969 79648968 79649004 36 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTT ..x..............................:.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 31775601 NA +3077 chr4 + 190214555 46382143 46382142 46382209 67 TAATGGTAATAAATTATATATATATACACAAACATACACACACACACACACATATATATATATATAT chr4 - 94230402 87372727 87372726 87372793 6857610 6857609 6857676 67 TAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x:.x..x.......x.x:.x.:.....x...x.........:x:.:..:...:..::....... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% -40990584 -53239818 +9893 chr4 + 190214555 46386067 46386066 46386220 154 TTTTTACCTCCCAGTCCTGGTCTAAGCCGATTATCGTAACCATCCAGAAGTCTGTCAAGAATTCTCGTAAAGATGGTAATGTTATTTTTAGCCTCATCTTCTTGGATGTTAGCCAGCACCAACCTAAACAGATA------ATTTTAAAAGCTGATATATA chr4 - 94230402 25274399 25274398 25274558 68955845 68955844 68956004 160 TTATTACCTCCTAATCCAGGTCTAAGACGATTATCATAACCATCCAGAAGTCTGTCTAGAATTCTTGTAAAGATGGTGATGTTATTCTTAGCTTCATCTTCCAGGGAGTCAGCCAGCACTGATCTAAATGGATATTTTACATTTTAGAAGATGCTAGGTA ..x........:.:...x........x........:....................x........:...........:........:.....:........:x..:x..:.........::.:.....::....------......:...x..x..x:.. 134M6I20M 128/154 83.1% 160/94230402 0.0% 6/154 3.9% 21111668 NA +6402 chr4 + 190214555 46387929 46387928 46388246 318 GATGAAAATCAGGAAAGTCTACAAAATAAAATGAAGTTACTGAAAGCAATAAAAATTAATTTCATGTTTTTATAGCATAGGCAAAAGAAAATTCATTACATATTTTAAATCAGTACTCCTGACTGTA--AGCATTTGAGAAA---AAAATCTTAATAATGCAAAAAGTCGATGATTAATAAATCTAGCTTTTGTTTCATTGTTTGTGATTGTGAAGTTGTATACTACCTCCACCTAGAGGTTTAAGACTCACACATCTTTTGGG--TTTTCTATGGTGACTAAAGGAGCCATACCATTAAAAAAA------------GAAAAGAAAAAGGAAAAAAA chr4 - 94230402 25276349 25276348 25276666 68953737 68953736 68954054 318 GGTGAGAACCAGAACA--------AGTAAACCAAAGTTAC------AAACTACAATCAGGTGTATGTTTAGGGACCGTGGGAAACACAAAACTAATTATTTGATTAAAAT---TATCTTCAGCTGTGTTGTCACTCTAGAAATGGGAACTTTAAACAAAATTGAAAA--GTTGATTATTAAATGAAGGCATTGTTTTATTGTAAGCGATTGTGAAGTTGTATGCTACCTCCACCTAGAGGTGCAAAGCTTAAGTGCCATCTGAAATTCTGTTATGTTGACCAAAAAAAAGACACCAAAAAATAGACGTGCCCGAACTGAAAATAATAATAATAAAAA .:...:..:...:.x.--------.:....x::.......------x..:x.x...:.:x.x:......xx:x.x.:.:..x..x.x....:.x....:x.:x..x....---..:::::::....:--:x..:.:x.....---:..x.:.x..:..x::x:...:--.x......x.....xx..x:x......:.....xx.:................:..................x:..::..:.x::::.x.:..::--.:.x:....x....:...::.:xx.:....xx...x.:.------------.....x..x..x:.x..... 16M8D16M6D64M3D14M2I13M3I22M2D95M2I39M12I20M 194/299 64.9% 318/94230402 0.0% 38/299 12.7% 21111580 NA +3080 chr4 + 190214555 46388901 46388900 46388949 49 CCACCCTTTTCCTTTCTGTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTT chr4 - 94230402 29919920 29919919 29919968 64310435 64310434 64310483 49 CCACTCTATCCCTTTCTGTTTCTTTCTTTTTCCCTTTCTGTTTTACTTT ....:..x.:...................:.:::.....x.:..x.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 16468981 NA +3181 chr4 + 190214555 46390192 46390191 46390231 40 CTCCCCCCCCTCCCCCCCCCCCACACACACACACTCCCCT chr4 - 94230402 30040841 30040840 30040880 64189523 64189522 64189562 40 CTTCCCCCCCCCCCCCCCCCCCACACACACACACACCTTT ..:.......:.......................x..::. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 16349351 NA +8965 chr4 + 190214555 46417917 46417916 46418136 220 TTTATCATTCATTTCTGTGTTATTGAACCAAAACTGCCTGCAGGTGCATGTGGCTATTTAAAGGAAATTGTAAATCGCTTTCATATCTTACTAATGTAGTGAGGACGTATAAATAGTTGCACATGGCAGATAATTAGTTTATGCCAACACATTATTGTGCTTACGAGCATCTGGATATCAACTACTTGGCAAAAGAGCCAAAGAAAGTTATTGCTAACAA chr4 - 94230402 25284294 25284293 25284504 68945899 68945898 68946109 211 TTTAATATTAATTTCCTCAACACTGAGTCAAAAATGCCAGTAAGTGCAAAGGGATTTTTAAGGAAAG--GGAAGCTGCCCTCATATCTCTCTAACACAGCAAGAATGTATAAATAGTTGCACATGGCAGATAATTAGGTTGTGTTAACACAGCATTGTACTTGTGAGCATCTGGGTAGCA-------GACAGGAGAGAACAGCTGAGTGGCTGCTAGCAA ....x:...x.....:x::x:.:...::.....x....x.:.:.....x:x..x.x.....:.:..:--.x..:::..::........:x....:::..::..:.:...............................x..:..::......x:.....:...::..........:..x..-------.:..::....xxx.:xx:...x::.....:... 67M2D111M7D33M 147/211 69.7% 211/94230402 0.0% 9/211 4.3% 21133623 NA +3006 chr4 + 190214555 46473399 46473398 46473472 74 CATATATATATATACATATATATATATGCATAATTATGTATGCATGTATAATATATATATTACACACATATATA chr4 - 94230402 5044444 5044443 5044517 89185886 89185885 89185959 74 CAGATAACCAAATACATATAGTTAGAAACATTACCATGTATGTATGTATAACTTATATTTTGTATATACATACA ..x...xx:.x.........xx..x.x:...x.::.......:........:x.....x..::.:.:.:...:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 41428955 NA +3076 chr4 + 190214555 46473477 46473476 46473521 45 ATATATATACATATATGTGTGTGTGTATATATATACACACATATA chr4 - 94230402 15949063 15949062 15949107 78281296 78281295 78281340 45 ATTTATATATATATATGTGTGTGTGTGTATTAATACACCCATATA ..x......:................:...xx......x...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 30524414 NA +3116 chr4 + 190214555 46473481 46473480 46473560 80 ATATACATATATGTGTGTGTGTATATATATACACACATATATATGCGTGTGTGTATATATGTTATATATACACACACACA chr4 - 94230402 1888773 1888772 1888852 92341551 92341550 92341630 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA ..........:.:::xxx...:x.x.:.:....:.:...:.....x:.x...........x..::...x.:.:x..x.:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 44584708 NA +3116 chr4 + 190214555 46473481 46473480 46473560 80 ATATACATATATGTGTGTGTGTATATATATACACACATATATATGCGTGTGTGTATATATGTTATATATACACACACACA chr4 - 94230402 1885632 1885631 1885711 92344692 92344691 92344771 80 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAAATA ..........:.:::xxx...:x.x.:.:....:.:...:.....x:.x...........x..::...x.:.:x..x.:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 44587849 NA +3104 chr4 + 190214555 46473504 46473503 46473604 101 TATATATACACACATATATATGCGTGTGTGTATATATGTTATATATACACACACACATATATATATACACATATATATATACACATATATATATATATATA chr4 - 94230402 87903003 87903002 87903102 6327301 6327300 6327400 100 TACTTATGCCTACA-ACGTACGCCTGTTTGCACATAAGGCACACATATATACAGGCACAGACATATACAAACATAAATATGCACAGCTTTTTAAATAGACA ..:x...:.x:...-.::..:..x...x..:.:...x.x:.:.:...:.:...x:..:.x.:.......x.:...x....:....xx.x.x..x...x.:. 14M1D86M 65/100 65.0% 100/94230402 0.0% 1/100 1.0% -41429499 -52800903 +3017 chr4 + 190214555 46473543 46473542 46473612 70 TATATATACACACACACATATATATATACACATATATATATACACATATATATATATATATACCCCTCCT chr4 - 94230402 66904848 66904847 66904917 27325486 27325485 27325555 70 TATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCT .....:...::.......:...:.:.:........x..x:.x..x:.:....:.xx:...::.x::.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -20431305 -73799097 +3240 chr4 + 190214555 46478729 46478728 46478777 49 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGCAAACCCTATTGTGA chr4 - 94230402 52213752 52213751 52213800 42016603 42016602 42016651 49 AAGACAAAAAAGAAAAAAAAAAGAAAAAAGGATACAAGCTCAATTGTGA ..:.x......:..........:.......:..:...:.:.x....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -5735023 -88495379 +3149 chr4 + 190214555 46479445 46479444 46479520 76 TGTTTATGTTTTTGTTTTTTGGGGTTTTTTTTGTTTAGTTTTGTTTTGTTTTAGACAAAGTCTCGCTCTTTTTCCC chr4 - 94230402 41161892 41161891 41161967 53068436 53068435 53068511 76 TGTTAACCTGTGTTTATTGTGGGGTTTTTTTTGTTTTGTTTTGTTTTTTTTCCACAGAATTCCCATTCCATTTCCC ....x.:x.x.x.x.x..x.................x..........x...:x:xx:..x..:.::..:x...... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 5317553 NA +3152 chr4 + 190214555 46521394 46521393 46521448 55 CACACCTGGCTAATTTTTGTGTTTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTTT chr4 - 94230402 84067030 84067029 84067084 10163319 10163318 10163373 55 CACAGTTGGTTCTTCTGTGGGTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTCT ....x:...:.xx.:.x..x...........................xx....:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -37545636 -56684766 +3053 chr4 + 190214555 46539240 46539239 46539315 76 TGTTTGCTTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTG-CATGTGTGTGTGAGCACCAATAGGTTTCTTCA chr4 - 94230402 34493726 34493725 34493802 59736601 59736600 59736677 77 TGTTTCCTTATGTATGTTTCTGAGTGTGTGTGTGTGTGTATTTGCCCCCTGTAGGTGGGGTCTGGTAGGTGTGTACA .....x...:...:.....x..x................:.x..-.x:x...:x...:.xx.:::.....x.x.x.. 44M1I32M 55/76 72.4% 77/94230402 0.0% 1/76 1.3% 12045514 NA +3219 chr4 + 190214555 46581252 46581251 46581327 76 AATAAACATAGCATCAAGTCTTTATTCTTCATCTTCAAAGTACTTGGTAAACATTAAATAATTAATCCCCACAACA chr4 - 94230402 881253 881252 881328 93349075 93349074 93349150 76 AAAAAAGACAGCACTTAAATAACACTTTGCAGCTTCGCAGCACTTGATAAACATTAACTAATTAATCCTCATAGCA ..x...x.:....::x.:x:xx:.:.:.x..x....:x..:.....:..........x..........:..:.:.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 45699999 NA +3370 chr4 + 190214555 46581267 46581266 46581341 75 AAGTCTTTATTCTTCATCTTCA--AAGTACTTGGTAAACATTAAATAATTAATCCCCACAACACATTTGGGAAGTAG chr4 - 94230402 24418750 24418749 24418826 69811577 69811576 69811653 77 AAAGCTTAATACTTTAATTTTATGAAGTACTTTCTAAACACTAACTAATTAATCTTTACAACACTCTTGTGAAGCAG ..:x...x..x...:.x:..:.--........xx......:...x.........:::.......x:...x....:.. 22M2I53M 56/75 74.7% 77/94230402 0.0% 2/75 2.7% 22162517 NA +3419 chr4 + 190214555 46581276 46581275 46581342 67 TTCTTCATCTTCAAAGTACTTGGTAAACATTAAATAATTAATCCCCACAACACATTTGGGAAGTAGG chr4 - 94230402 27733197 27733196 27733263 66497140 66497139 66497206 67 TTTATAATTTTTAAAGCACTTTACAAATATTAACTAGTTAATCCCCACAGCAAATCTGTGTGGTAGG ..:x.x..:..:....:....x::...:.....x..:............:..x..:..x.x:..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 18848079 NA +3116 chr4 + 190214555 46590620 46590619 46590680 61 TTTCTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTT chr4 - 94230402 17623042 17623041 17623102 76607301 76607300 76607361 61 TTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAGGTTT ..:......:xx.::.:..:::.............:.x....x........:.:...x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 28967578 NA +3095 chr4 + 190214555 46617013 46617012 46617098 86 ATATATATATATATATATATATATATATATATATGCACAATTTAGTTACCTTTTATTTTCTCCTTCTGTATCTAATCTAGGGGATT chr4 - 94230402 87389242 87389241 87389327 6841076 6841075 6841161 86 ATTTATATATATGTAAGTATGAATATATGTATATGCACAATTTTTTCAAGATCTACTTTTTGCCATAGCATTGGATTTTTGGAATT ..x.........:..x:...:x......:..............xx.:.xxx.:..:...:.x.:x:x.:..:x:..:.xx..:... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% -40772229 -53458173 +3795 chr4 + 190214555 46618507 46618506 46618577 71 TATATACATACAAACACATACTTGCACACATATACACACATTCATACACACACACACACACACACATACAT chr4 - 94230402 8395795 8395794 8395865 85834538 85834537 85834608 71 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.::::.:.....::..:..:..:.::...:.x:.....x...................x...:.x.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 38222712 NA +3209 chr4 + 190214555 46623963 46623962 46624045 83 TTTTCAGG-GTATAGTATTTTTGGTCGGCAGGTTGTTTTTTTGTTGTTGTTGTTCTTGTTTCTGTTTTTGTTTTCTTTCCAGCA chr4 - 94230402 67801505 67801504 67801577 26428826 26428825 26428898 73 TCTTCAGGAGTATTTTATTT-----------GCTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTTCCAACA .:......-....xx.....-----------.:....x..............:.x:..x..:.x.....x....:......:.. 8M1I11M11D53M 58/72 80.6% 73/94230402 0.0% 12/72 16.7% -21177542 -73052860 +3010 chr4 + 190214555 46652131 46652130 46652193 63 CCAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAGAA chr4 - 94230402 24662124 24662123 24662186 69568217 69568216 69568279 63 CCAGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGA ...:xx....................xx...:x:.:.....:::.x.:..:.:...x....:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 21990007 NA +3546 chr4 + 190214555 46652131 46652130 46652196 66 CCAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAGAAAAT chr4 - 94230402 20475869 20475868 20475934 73754469 73754468 73754534 66 CCAAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACAT .....................:...:...x...:x..:..:.x.x.x.:...x.x....:...x.. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 26176262 NA +3063 chr4 + 190214555 46652149 46652148 46652201 53 AAAAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAGAAAATTCCTA chr4 - 94230402 47832328 47832327 47832380 46398023 46398022 46398075 53 AAAAGGGAAATAAAGAAATAAAAAGGAAAAAAATAAGAGAGAGAGATTTCTTA ....::....x.......x......:.....:.x....:.:...:.x...:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -1180179 -93050223 +3078 chr4 + 190214555 46669725 46669724 46669813 89 TGTTTTTAAGTCAAGAAATCCAGACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTGAGATGGA chr4 - 94230402 65205090 65205089 65205178 29025225 29025224 29025313 89 TGGTTTTGGGTCAGGATGTTTGAATTGGTTAATTAATTAATTTATTCATTCTTCTATTTACTCATATATTCTGATACTTGTGACATAAA ..x....::....:..x:.::::.:.x:..x...x...x.......:...:x.:......:.:..x....:xxx..:..x...x..::. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% -18535365 -75695037 +3464 chr4 + 190214555 46701303 46701302 46701394 92 TCATAGTCCCTTTCCTACCA-ACATATATATACAT-----------ATATATATACACACATGCGTGTGTGTGTGTGTATATATATATATAGAGAGAGAGAGAG chr4 - 94230402 33398757 33398756 33398860 60831543 60831542 60831646 104 TCATAGTTCAGATCTTATGAGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAG .......:.xxx..:..:x.-.x.....:.:....-----------.....x..::.:x:.x:x.....:...........:.:.......x.x.......... 20M1I14M11I58M 68/92 73.9% 104/94230402 0.0% 12/92 13.0% 13302546 NA +3346 chr4 + 190214555 46701333 46701332 46701393 61 ACATATATATATACACACATGCGTGTGTGTGTGTGTATATATATATATAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398863 60831540 60831539 60831600 61 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGA .:...x..:...x:.x.x:..:.:........:.::.:.......:.:............. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 13302530 NA +3296 chr4 + 190214555 46723743 46723742 46723780 38 GTTTTTTTTCTTGGTTTTTTTTTTTTTTTTTGAGCAAA chr4 - 94230402 58293510 58293509 58293547 35936856 35936855 35936893 38 GTTTTTTTTGTTGGTTTTTTTTTTTTTTTTTGAGCAAA .........x............................ 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% -11569767 -82660635 +3638 chr4 + 190214555 46729392 46729391 46729465 74 GTTGCAGTGAGCTGAGATTCCATCTCAAAAAACAAACAAACAAAAAAACCACAACAAAAAACA---ACAAAAAAACC chr4 - 94230402 38453232 38453231 38453308 55777095 55777094 55777171 77 GTTACAGTATCTTTAAGCCTTATCTTAAAAAACAAACAAACAAAACAACAATAACAAAAAACAGTTACAGTAAAACC ...:....:xx:.x.::::::....:...................x...x.:...........---...:x...... 63M3I11M 56/74 75.7% 77/94230402 0.0% 3/74 4.1% 8276160 NA +3150 chr4 + 190214555 46729401 46729400 46729461 61 AGCTGAGAT--------TCCATCTCAAAAAACAAACAAACAAAAAAACCACAACAAAAAACAACAAAAA chr4 - 94230402 27510422 27510421 27510490 66719913 66719912 66719981 69 AGCTAAGATGTTTTTAGTTTATTGGAGAAAACAAACAAACAAAAAAACCCAACCAAATAACAACAAAAA ....:....--------.::..:xx.:......................xx.x....x........... 9M8I52M 50/61 82.0% 69/94230402 0.0% 8/61 13.1% 19218979 NA +3912 chr4 + 190214555 46734926 46734925 46735052 127 TCATTACAGCAACTGTGATGGTTACTGATGTTTCCACTCTTTTGGGGTAACTCTGCCAACAGGGGATAGGTTCCATTCTATTCCAATCTGAGTGGCTGTAAACACCCATGTAGCAACACAGAAAGCA chr4 - 94230402 81228789 81228788 81228902 13001501 13001500 13001614 114 TCATTGCAA-----GCAAAGGCTGTTACTCCCTCCATTCTTTAGGAGTGACTCTGCCAACTGGTGACAAGCCCCACTCCATTCCAGATT------TTGTAAACACC--TGTAGGAGGATAAAAATCA .....:..:-----.::.x..:.::.:x.x::....:.....x..:..:...........x..x..:.:.::...:..:......:x:.------:..........--.....x.:x.:.:...x.. 9M5D75M6D11M2D19M 79/114 69.3% 114/94230402 0.0% 13/114 11.4% -34493863 -59736539 +3036 chr4 + 190214555 46754709 46754708 46754748 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -43066573 -51163829 +3334 chr4 + 190214555 46762197 46762196 46762288 92 ATTATAATATACATTTAATAT-----GTATATTATT---TATATATTAAATATATTATATATTTAATATATAATATATTTAATATATATGTAACATATAT chr4 - 94230402 67910055 67910054 67910154 26320249 26320248 26320348 100 ACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAAT .:.x..x..:.:..x:....:-----:....:....---..:...x..........:.....xxx...........:.xxx.....:....:.x...x.. 21M5I10M3I61M 68/92 73.9% 100/94230402 0.0% 8/92 8.7% -21147858 -73082544 +3009 chr4 + 190214555 46763212 46763211 46763265 54 ATAATATATATTCATATATATTATATATATACATATATATACACACACACACAA chr4 - 94230402 60979348 60979347 60979401 33251002 33251001 33251055 54 ATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAA ......x.x.:xx.:.x.x.:.x..........:.................... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -14216136 -80014266 +3441 chr4 + 190214555 46766706 46766705 46766775 70 GAAAAAAAAAAAAAAAAAGAGTCAGGGGAAGGGAAGTGTAGAATTTTTGCATATGGTTGAAATTAAATGT chr4 - 94230402 10407504 10407503 10407572 83822831 83822830 83822899 69 GGGGAAAAAAAAGAATAAAAATCAGGGGAAAAAAAGTGTAGAATTTTTGAA-ATAAGTGAATATAAGTGT .:::........:..x..:.:.........:::................x.-..::x....xx...:... 51M1D18M 52/69 75.4% 69/94230402 0.0% 1/69 1.4% 36359202 NA +3037 chr4 + 190214555 46837255 46837254 46837323 69 GTATGAACACACAAAGACATACACACACACACACACACACACACACACACACACACACACAGAGGAATA chr4 - 94230402 8395802 8395801 8395870 85834533 85834532 85834601 69 GCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:..:....:::.xxx.....:::.::.x:...:xx.:.................x.....:.x..... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 38441453 NA +3046 chr4 + 190214555 46858169 46858168 46858242 74 CTGCAATCTCCACCTCCCAGGTTCAAGAGATTCTCCCACCTCAGCCTCCTGAGTAGCTAGGACTGCAAGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..::.:xx.x..:.::........x.x...x.xx:x........::::.......:.:...:..x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 28661043 NA +3602 chr4 + 190214555 46907929 46907928 46908000 72 CTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGGCTCAGCCTCCCTAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:.........:.x...x.xx..........::.x.........:......x.:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 28710803 NA +25807 chr4 + 190214555 46928037 46928036 46928788 752 GAAAAAAAACATAGTTCACTTTTTCACTCAGGAATTAATTAACTCTCCCAATAACTGGCTTATATCTTTA-AATGGAAAAATTACACAGAGTTTTTATTTTAGTAAAGAATATTTGTTTATATTTAAAAACATTT---AAAAAGACATTCTGCAT----TTTCATCATCTTTTAGCAAACTACTA--TAGCAACGAAATTACATTAGACTTTCTGATTTCTCCATAGTGTCCTTAGATAAATAAACAACCCAATAAACCATGTTAAATGCCCCAAATGTGACTGGAAAGAGAATACGGGCATATTTGTCTATTTTACTTGTGCCAGATCCAGAAGGTGGTGGAGCCGATGGAGGAGGAGTAGCTGACAACTTCCCAGTAGCCCCTATGGTATTAACT---GTGGTCTTTATCCTCTGCAGTCTTGATCCAAACACGTGACGAGTAGAAGCAGATCCAACTGAAGCCTTTCGAGGCATATATCCAGTTCGGATAGAAGTAGGAGAAGCAGATGGAAGT---GCTCTTGCTGCAGATATGGTTTCAGCTGCATTTGCACGGCTGAATGGGTTTGGACTGGAAGCTAAGTAAGACCGAGGTGTGCCTTTAGAAGATTCTTGAACAACTGTGGAAGATTTGCTTGAATGGTTTCCCACCTCAGTTCTGTTGCCAACATCAGATTCAGAGTGAACCAAAGCATTTGTTCTTTTTCTCATGTTCAAATTGGCATTTGTATTCTGAAAAGGTAT--ATGAAAAAATATATTGGTTAT chr4 - 94230402 25376302 25376301 25377055 68853348 68853347 68854101 754 GGAAAAGAATTCTGTTACCTATTT---TTAAGAATTACCTCATTATCCCCAAGA---ACTCCAGCCTTTACAATGGGAAAGTAGCATACAGCTTTTAT------AAATAAGAATTATTGACTTTTTAAATAGTTTCAAAAGAAGAAACTCTGCATCAAATGTGAGTATAATTTAG-GAACTACTACATAGCAGCAAAACTACATTAGACTTTCTGATTTTTCCATGGTATCCTTGGATAGATACACCACCCAGTAGACCATGTTAAATGCTCCAAAGGTAACAGGAAATAAAATTCGTGCGTATTTGTCTATCTTACTAGTGCCAGAATGAGAGGCAGGGGGAACAGGTGGTGTGACAGCAGATG---GTTTTGCAGATGCTCCTAATGTATGAGGTGTGGTGGTCTGAATCTGCTCCAGTCTAGATCCAAGCAAGTGCTGAATGGAAGGGGATCCAACTGTGGCATGCTGGGATACAAATCCAGTTAAAATTGGGGTAGAAGGAGGAGCTGGAGGGGTAGCTCTTGCAGAAGACAATGTCTCTGATGCATTAATACGTGTGAAAGGGTTGGGACTTGATGCAGAAAGGGAATGGGGTGTAACGTCAGAAGACCCCTGAGCTACAGAGGGAGGCTGGATGGAGCTGTGCCTTGTGTCAATTCGACTCCCACCATCAGCTTCTGACTGTACTGTGGCATTCGTTCTTTTCCTCACATTTGAATTGGCATCTGTACTCTGGAAAGTTACAAAAAAAAAAAAATACTAGTCAT .:....:..:x:x...xx..x...---.:.:......x:.x.:.x....x.x:.---:..:xx::.....-.....:...:.x:..:.x..:......------...x..x.x..:..x.:x...x...xx:...---..:....x.:.......----.x.x.x:..xx.....-:........--.....:.:...:....................:.....:..:.....:....:...x..x.....:..:..............:.....x..:..x.....x.:...x..x..:...........:.....x........x:x...:.xx..x...:.x.:...x.x::x..:..x..---::..:x...xx..:....xx....x.:x.---.......xx...:x..x......x.......:..x...x:..:.:....x:..........x:..x.x::.:.::.:.x........x::..x.::....:..:..x..x....:.x---........x.x...:.xx..:..x.x......x::...xx....x.....x.....x..x..x:.:x::..x:.:.....:x.x.:......::.:...:.x..x.x..:..::.x.x.x..::x..x:.::::x...:...x::.x...x......x...x..x..x..::x:.....:........:....::..::.........:....:....:....x..:--.x:......x...:.:..:.. 24M3D27M3D13M1I27M6D31M3I17M4I16M1D9M2I178M3D29M3I117M3I227M2I21M 510/736 69.3% 754/94230402 0.0% 34/736 4.6% 21551735 NA +11057 chr4 + 190214555 46940851 46940850 46941134 284 AAAACATTCAACGTTTAACAAGGCTCTCAAGCTGAAACAGCTGTTCATCCAAAGTGAAACTTTTTTTAACTTTCTCTGAGTCTAGCTAATC--TTACTTGAGCTAGAAAATAAGGTATTAGACTATTTTGCATGTTCTACCA-CTTTATGACAAGAAAGCCAATTTTGCACTTCAGTAAAGGCAGATTGCAAATTTAGCATGAATTGAA-------CCAGTAGCTGAGTTGCAATTTATGGCAAATGGCTCATCAGCACATTAATGTATACTGCCAATATAACCACTTCAGCCA chr4 - 94230402 25382958 25382957 25383241 68847162 68847161 68847445 284 AAACTCTTCAATATTTAACAAGGTT--------GGCACAGATGCTCACATAACGTGGAAATCCTG--AAACTTCTTTAAGCCTACATAAGCATTTACTGGAGCCAAAAAACAAAATACTGGATTGTTTTGTATGTATTACCAGCTTTCTGACAAGCAAGCCAACTTTGCACTTCAATGAAGTCAGATTGCAAATTTAGCATGAACTGAAGTAGCGTGCAGCAGCTGAGCTGAGATTCATGGGAATGGGATCATCAACACAGCAATACACAGCACGGAACTGACAAACTTAGTCA ...x:x.....::..........:.--------.:x....x..:...:x:..x...:..x.::.x--..x:....:.:..:...xx...x.--.....x....:.:....:..::..:.:..:.:.....:....x:.....-....x.......x.......:...........:.:...x......................:....-------x...:.......:..x:...:....x..xx..x......:....x:...::.:.x::.x:.xx.:..x.x:.:..:.. 25M8D32M2D24M2I49M1I66M7I78M 198/274 72.3% 284/94230402 0.0% 20/274 7.3% 21557893 NA +3274 chr4 + 190214555 46951660 46951659 46951795 136 TTCTTCTTCCTCTATAGCTCTTCCGTTTTCCTAATA-----------------TTAATATGTATAATAAAATACTAGGAAATTTGTTATATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGTGTGTAC chr4 - 94230402 39267064 39267063 39267209 54963194 54963193 54963339 146 tctttcttcctttctttTTCTGCCTTTGGGCTAATAATGAGTTCTGCAGTTGTTCCATGTATGTAAAGAAA-------GAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATAC .::........:.x.xx:...x..x..xxx......-----------------.:x..:.:.:...x:...-------:....:xx....x..:.:.:.:..x.:.:::..:xx...:.....:......x.....:..x.:....x:.:... 36M17I18M7D75M 84/129 65.1% 146/94230402 0.0% 24/129 18.6% 7684596 NA +3203 chr4 + 190214555 46951708 46951707 46951760 53 ATAAAATACTAGGAAATTTGTTATATATATATATGTGTGTGTGTGTATATGTA chr4 - 94230402 27034805 27034804 27034857 67195546 67195545 67195598 53 ATAAACGTCCTGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATA .....xxx.:x.::.....:............:.............:...:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 19916903 NA +3086 chr4 + 190214555 46951731 46951730 46951789 59 TATATATATATGTGTGTGTGTGTATATGTATGTGTATATATATGTGTGTATATATATGT chr4 - 94230402 35554958 35554957 35555016 58675387 58675386 58675445 59 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT ..x......x..x.........:.:..:.:x.............::.::.x.x..:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 11396773 NA +3010 chr4 + 190214555 46951765 46951764 46951837 73 TATATATATGTGTGTATATATATGTGTGTACGTGTGTGTGTGTGT--------GTGTGTACATATATATATAATTTTCAAG chr4 - 94230402 19704281 19704280 19704361 74526042 74526041 74526122 81 TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATATTTTCAGG ..:......::..:.....x.:...:...x.:.............--------....x.x:xx..x..:.xx.......:. 45M8I28M 54/73 74.0% 81/94230402 0.0% 8/73 11.0% 27247484 NA +3828 chr4 + 190214555 46959758 46959757 46959887 130 CAAAAAAAAAAAAAAAAAAGAAAAGAAAACTCTATCAACTCACTATAACACAAAAATTATGTATATATATATATATATGTGTGTGTGTGTGTGTATGTGTGTGTGTGAGTGTGTCTCCAAAACTGGAATA chr4 - 94230402 19704227 19704226 19704353 74526050 74526049 74526176 127 caaacaaacaaagaaacaagcaaaACAGAAACAAGCAACCTGAAGCAATCTAAA---TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATA ....x...x...:...x...x...:x.:.xx.x.x....:::xx::..:x:...---..::......::.......x.....:...x::.....:........x:.xxxx....:.::x..x..:x.... 54M3D73M 82/127 64.6% 127/94230402 0.0% 3/127 2.4% 27255531 NA +17167 chr4 + 190214555 46964981 46964980 46965254 274 CTTCAGGATGCTTCTCTCTCTGCACTGGAGCAGCGGGAACTTCCTGAGGGGGCTTTGATGTCTTCCTTTTGGCTTTTTCCATTTGAATATTGGTGAAATAGTTGACAGCAGCAAACTCGATAAGGGCCGAAAATACAAAAGCAAAGCAGACAGCTATGAACCAGTCCATGGCGGTAGCATAGGACACTTTGGGCAAAGAATGTCGTGCACTGATGCTTAGTGTGGTCATGGTGAGGACAGTTGTTATTCCTTCAAAGCAAAAGAGCAGAGAGAC chr4 - 94230402 25390925 25390924 25391198 68839205 68839204 68839478 274 CTTCTGTACATTTTTCTCTTTGTATTGGAGCAACTGGAAATTCAAGGAGGGATTTTACAGTCTTCCTTTTGGCTCTTTCCATTTGAATATTAGTAAAATAGTTGACAGCAGCAAACTCGATAAGAGCAGAAAACACAAAGGCAAAGCAGACTGCTATGAACCAGTCCATGGCAGTAGCATATGATACTTTTGGCAGTGAGTGTCTTGCACTGATGCTCAGCGTCGTCATTGTCAACACTGTGGTTATTCCTTCAAAGAAACAAAACAAAAGCAC ....x.x.:::..:.....:..:.:.......:.x....x...xx.::...::...:xx...............:................:..:.............................:..x.....:.....:...........x....................:........x..:.....x....:x..:....x............:..:..x.....x..x.:x..x..x...............x..x.:.:..:.::x.. 274M 220/274 80.3% 274/94230402 0.0% 0/274 0.0% 21574056 NA +8625 chr4 + 190214555 46965070 46965069 46965257 188 TTGGTGAAATAGTTGACAGCAGCAAACTCGATAAGGGCCGAAAATACAAAAGCAAAGCAGACAGCTATGAACCAGTCCATGGCGGTAGCATAGGACACTTTGGGCAAAGAATGTCGTGCACTGATGCTTAGTGTGGTCATGGTGAGGACAGTTGTTATTCCTTCAAAGCAAAAGAGCAGAGAGACAAA chr4 - 94230402 25229644 25229643 25229829 69000574 69000573 69000759 186 TTTGTAAAATAATTAACAGTTGCAAATTCAATTAATGCAGAGAATACAAATGCATAACAGACAGCGATAAACCAATCCATAGCTGTTGCATATGCTACTTTGGGGAGTGAATTTCGAGCACTGATGCTCAGCGTTGTCATTGTCAACACAGTAGTAACTCCTGTAAGGGGATAAA--AAAAAAACAAA ..x..:.....:..:....:x.....:..:..x.:x..x..:........x...x.:........x..:.....:.....:..x..x.....x.x:........x.:x....x...x...........:..:..x.....x..x.:x.....x..x.:....x:..:.x:.x.:.--.:.:.:..... 175M2D11M 136/186 73.1% 186/94230402 0.0% 2/186 1.1% 21735426 NA +10528 chr4 + 190214555 46965070 46965069 46965256 187 TTGGTGAAATAGTTGACAGCAGCAAACTCGATAAGGGCCGAAAATACAAAAGCAAAGCAGACAGCTATGAACCAGTCCATGGCGGTAGCATAGGACACTTTGGGCAAAGAATGTCGTGCACTGATGCTTAGTGTGGTCATGGTGAGGACAGTTGTTATTCCTTCAAAGCAAAAGAGCAGAGAGACAA chr4 - 94230402 83345629 83345628 83345812 10884591 10884590 10884774 184 TTGGTGAAGTAGTTGACAGTGGCAAATTCAATCAGCGCAGAAAACACAAAGGCATAACAGACGGCTATGAACCAGTCCATGGCCGTCGCGTACGCCACTTTAGGTAACGAGTTTCTTGCGCTGATGCTTAGTGTGGTCATGGTGAGCACAGTGGTGACACCT--ATGGAAACACAGCAGA-AGACAA ........:..........::.....:..:..x..x..x.....:.....:...x.:.....:....................x..x..:..x.x......:..:..x..:.x..x...:..........................x.....x..x.:x...--.x:.x..x.x......-...... 162M2D16M1D6M 149/184 81.0% 184/94230402 0.0% 3/184 1.6% -36380559 -57849843 +7104 chr4 + 190214555 46971032 46971031 46971269 238 TGAATAAAATGTAATGTGAACAAAAACGCCCAAGAAATGAATTGCAATTACCAAATACAGTCCTAGCGGGAACTGATTCTTTATTTATCCAAAATGAAACTTGAGAAAGAATCACTGTCATAATGCACGGAATATAGGTCTGAATCATAAAATAACCCATCTTCCGTCTGAGGTGGAAGTAAACCGTCATAACAATATATTCACCTGCCAAGAAAACAGGAGGAAAATGTGTTATCGG chr4 - 94230402 83282344 83282343 83282568 10947835 10947834 10948059 225 TGGTCAACAAGCAACATGTACGAAACAGCCCT---------TTTCTCTTACCGAGGGATGTCCTGGCTGGTGTAGAGTCTCTCTTGATCCAGAAGGAAACCCAGGACAGAACAACAGTCAGGATGCAGGGAATGTAGGTCTGAATGGCAAAATAACCCATACGTCTACTTAAGTCAAAGGAAACCGTCATCACCATGTACTCCCCT----AGAAAAAAAGAAGTGAAAGAGACATTGG ..:x:..x.x.:..::..x..:...xx....x---------..x.xx.....:.:x:xx.....:..x..x::x..x...:.x..x.....:..x.....::::..x....:x..x....x:.....x.....:...........x::............x:x:.xx..x.:..x:...x..........x..x..:..:..x...----......x.:..:.x:..x.x.x:..:.. 32M9D165M4D28M 150/225 66.7% 225/94230402 0.0% 13/225 5.8% -36311312 -57919090 +13755 chr4 + 190214555 46971034 46971033 46971329 296 AATAAAATGTAATGTGAACAAAAACGCCCAAGAAATGAATTGCAATTACCAAATACAGTCCTAGCGGGAACTGATTCTTTATTTATCCAAAATGAAACTTGAGAAAGAATCACTGTCATAATGCACGGAATATAGGTCTGAATCATAAAATAACCCATCTTCCGTCTGAGGTGGAAGTAAACCGTCATAACAATATATTCACCTGCCAAGAAAACAGGAGGAAAATGTGTTATCGG-----TTCTG--CAGGCAATTAGTCAATGGCTTCATAAAC---ATATTTCAGACTAACAAACAGGATTCT chr4 - 94230402 25395824 25395823 25396124 68834279 68834278 68834579 301 AATAAAATGAGAAATCACGATAAAAAGTGAAAAACTGAAAT--AATTACCAAATACAGTTCTAGCTGGTACAGATTCCTTATTTATCCAAAATGAAACTTGAGAAAGGATCACGGTCATAATGCATGGGATATACGTCTGAATCATAAAATAACCCATTTTCCGTCTGAGGTGGAAATATACTGTCATAACAATATATTCACCT---AAAAAAAAAGAAAAGAAATATTTAAAAAGTATTTTTCTGACTACACGATTTTTTTTTTATGTCAGAGATTAACTGTTCTAGACTATCAACTAGGATTCT .........x:.x:.x.xx.x...x:x:x..:..x....x.--................:.....x..x..x.....:.............................:.....x...........:..:.....x.......................:.................:..x..:.....................---..:....x..:.:::....:.x.x.xx:.-----.....--:.x:.:...xx.:xx.x::x...x.:.:---x.:..::......x...x:........ 41M2D161M3D29M5I5M2I28M3I27M 226/291 77.7% 301/94230402 0.0% 15/291 5.2% 21575210 NA +8980 chr4 + 190214555 46971074 46971073 46971259 186 TGCAATTACCAAATACAGTCCTAGCGGGAACTGATTCTTTATTTATCCAAAATGAAACTTGAGAAAGAATCACTGTCATAATGCACGGAATATAGGTCTGAATCATAAAATAACCCATCTTCCGTCTGAGGTGGAAGTAAACCGTCATAACAATATATTCACC-----TGCCAAGAAAACAGGAGGAAAAT chr4 - 94230402 25237067 25237066 25237256 68993147 68993146 68993336 190 TGTACTCACCAAAAACTGTCCTGGCCGGTACAGATTCTCTGTTCAGCCAGAATGAGACTTGAGAGAGAATGACAGTCATGATGCATGGGAGGTATGTCTGAATGACAAAATAACCAATTTTTCTCTTCAAGTGAAAATGAGCCGTCATTACTGTATATTCACCTAATGTGCCAC-AAAACAAAAACAAAAT ..:.x.:......x..x.....:..x..x..x......:.:..:.x...:.....:........:.....x..x.....:.....:..:.x:..x........x.:.........x..:..:.x::.x.:...:..:.:.:.......x..x:..........-----.....x-......::.:x..... 163M5I6M1D16M 139/185 75.1% 190/94230402 0.0% 6/185 3.2% 21734007 NA +7061 chr4 + 190214555 46971079 46971078 46971247 169 TTACCAAATACAGTCCTAGCGGGAACTGATTCTTTATTTATCCAAAATGAAACTTGAGAAAGAATCACTGTCATAATGCACGGAATATAGGTCTGAATCATAAAATAACCCATCTTCCGTCTGAGGTGGAAGTAAACCGTCATAACAATATATTCACCTGCCAAGAAAA chr4 - 94230402 25149643 25149642 25149811 69080592 69080591 69080760 169 TTACCCAGAGATGTCCTTGCAGGAACTGCATCCTTATTGATCCAGAATGACACCCATGAAAGAACAACTGTGAGTATACAAGGAATGTATGTCTGGATAGTAAAATATCCCATACGTCTGCTGAGATCAAAGAAGATTGTCATAATAATATAATCACCTATGAATTAAA .....x.:x:xx.....x..:.......xx..:.....x.....:.....x..:::x.......:x.....x.xx..:..x.....:..x.....:..x:.......x.....x:x:.xx.....:.x:...x.:.::.......:......x......::x..xx... 169M 118/169 69.8% 169/94230402 0.0% 0/169 0.0% 21821436 NA +11230 chr4 + 190214555 46974226 46974225 46974389 164 TCTCACCCGTAATTGATTTGATGGTTTCACTTGATACGGTTTGCCCAATCAAATCATATTGAACTAAGCTGGAAGACTCCTTCGGAACTTCAACTGATTTCTCAGGACCTTTTGTCCAGGTATAGATCATCTCACTCTTTGGATAGGCATCTAAAAGAGAGCAC chr4 - 94230402 25397269 25397268 25397432 68832971 68832970 68833134 164 TCCTACCTGTAATAGATTTAATGGTTTCACTGGATACCGTATGCCCTAGCAGGTCATACTGAACTAAACTGGAAGACTCCTCAGGAACTTCCACTGACTTCTCAGGTCCTTTTGTCCAGGTATAAATCATTTCACTCTTTGGATATGCATCTACAACACAGCAC ..::...:.....x.....:...........x.....x..x.....x.x..::.....:........:.............:x........x.....:........x.................:.....:..............x.......x..x.x..... 164M 139/164 84.8% 164/94230402 0.0% 0/164 0.0% 21576957 NA +4261 chr4 + 190214555 46974261 46974260 46974401 141 ACGGTTTGCCCAATCAAATCATATTGAACTAAGCTGGAAGACTCCTTCGGAACTTCAACTGATTTCTCAGGACCTTTTGTCCAGGTATAGATCATCTCACTCTTTGGATAGGCATC--TAAAAGAGAGCACAGAATGTGGTTA chr4 - 94230402 83349343 83349342 83349485 10880918 10880917 10881060 143 ACGACATGGCCCAGCAGGTCATATTGGTTCAGGCGAGATCCGCCCTTTGCAACTTCCACTGATTTATCCTTCCCCAGGGTCCAGGTGTAGATTACCTCTGTCTTTGTGTAGGCATCTGTGGAGGAAAAAGAAGAATGAGCTCA ...::x..x..x.x..::........:x::.:..x:..xxxx:....:.x......x........x..xxxx..:xxx........:.....:.:...xx......x:........--.::.:..:.:x:x......x.x.:. 116M2I25M 91/141 64.5% 143/94230402 0.0% 2/141 1.4% -36375082 -57855320 +4885 chr4 + 190214555 46977039 46977038 46977218 180 CAAAATTTTTATTATA-ACTTACAACTCCCGAATTTCAAAGGGCATGCATGACCATCCATGGGAAAATCCACCAATCTCATGGGACACTCCGCACTTATGGTGAGTCTATGATGAAAA---------ATGCAATTAAAT----------------AAAATCAACCCTTTTAAA---GAATAAT---TGTGACTTTAGATTCTAAAATAGGAA chr4 - 94230402 25241177 25241176 25241388 68989015 68989014 68989226 212 CATACTTCTGGTTATACACTTACAGCTGCCAAATTTCAGTGGGCATGAGTGAGCATCCATAGGGAAGTCCTCCAAGTGCATTGGACATTCGGCTTGGACTGTAAGCCTAAAAGGCAAAAAGATCACTATGCATTTAAGTCAGTTAGCAGGACAAGAAAATCAATCCCACAAAAAATGAACAGTTAATGTGTATTTAGGAGATAAAACTGaaa ..x.x..:.x:.....-.......:..x..:.......:x.......x:...x.......:..:..:...x....x:x...x.....:..x..x:xx.:x..:..:...x:.x.x...---------.....x....:.----------------........:..:x:x...---...:.:.---....xx.....:xxx.....:x.:.. 16M1I101M9I12M16I18M3I7M3I26M 127/180 70.6% 212/94230402 0.0% 32/180 17.8% 21735862 NA +20273 chr4 + 190214555 46977041 46977040 46977939 899 AAATTT--TTATTATAACTTACAACTCCCGAATTTCAAAGGGCATGCATGACCATCCATGGGAAAATCCACCAATCTCATGGGACACTCCGCACTTATGGTGAGTCTATGATGAAAAATGCAATTAAATAAAATCAA----CCCTTTTAAAGAATAATTGTGACTTTAG-ATTCTAAAATAGGAAGGAAGGGAGGGAAGGAGGAAGGAAGAAGGGAGGGAAGAAAAGGAAGGAAGGAAGGGAAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGAAAGGAAAGGAAAGAAAGAAAAGAATAAAAAAGGAAGGGAAGAAGTAAAAAAAAATATTACCTCATTGTGTATAAAATAGTACCATTTCTCATAATTCTAAAAAGCTTATTTGGAGCTGTCATATTATGTGAGACAGATTTCTTTCCATTCCTGAAGAAAGTATCAGGGGTCCACACTTTCGTTACCATCATATTGTTCAATCTCAAAATTTCAATGGGGCCGTCATATTTTAATCTTTTGTCAATCCATGTCTGCCTGAAGAACACATCCATTGTGTATTCCTAGGACAATTATTTTGGAACATATTTAAGTTGCA-------AATGACTACA--------CATAAGTATGT----------------------GAAAATAATGCATTAAATTCTGTCTTCCTTCATGCTCATAAAAAAATACCACTCCAAATAAAAT-TAATAGGAGCAGGAATGATCTTGAATCAATGGAGCAAAAAGATTCTCAGCAATTAGAATAACTTTTATCCATCTTGATACCTTCATCTTCTACATTCATAAGATAAATAAATTACCACACATA-CTAATAATTTAATAATAAATTTGCTATAATTTAAGAAAACTGCCAGTACCAGGTAGTTACAATTGT chr4 - 94230402 25399123 25399122 25399866 68830537 68830536 68831280 744 AAATTTCATAATTGTAACTTACAACTCCCAAATTTGAGAGGACAAGCATGACCATCCATGGGAAAATCCACTAATCTCATGGGACACTCTGCACTTATTGTAAGCCTATAATGGAACA---AATTAAATAGTCTCTGGTTGCCATTTTGTCTAGGCAGCATAACTTTTGCATACAGTAATTGCAAGAAACTGAAAAAACAAGCTAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCATTGTATACAGGATAGTGCCATTCCTCATTATTCTGAAGAGTTTATTTGGGGCCGTCATGTTATGTGCAACAGACTTTTTCCCATTCCTGAAGAAAGTGTCAGGAGTCCACACCTTCGAGACCATCAAGTTGTTAAGTCTTAAAATTTCAATAGGGCCATCATATTTTAATCTTTTGTCTACCCATGTCTGACGGAAGAAGACATCCATTGTATACTCCTG-------TATTTTGCAGAA-----AAATTGCAGAAAAATAAAGATCACATTTGCTTGTATAAGTGTTTCCTGTaaaaaaaagaaaagaaaaagaaaaaagaaaaaaa-------------aagaaaaagaaaaaaaaaTCCCTCAGGAGCAAATATATTAGTAGTAAAGAAAATGCTAAGTCCACTACAAAAACGTATTTTCACCAATTAAATAGTGTTGTGTACTCCTTAATAACTTAATTCCCCACATTAGTCATATCAATAAATTGATACTCGTGTTTAATCATTAAGGAATAA-------TTAATTTAATTAGATTGCAGGAAGCAGGCAGTTTAATTTGT ......--.x...:...............:.....x.:...:..x..........................:.................:........x..:..:....:...:..x.---.........:xx..x:----..x....:xxx.:xx.x::.:.....x.-..x.x:x...x.x...:..xx..:::..x:..xx..:----------------------------------------------------------------------------------------------------------------------------------------------------------------------...........:..:.::.....:.....:.....x.....:..:..:........:..:.....:.......x:.....:..:..:.................:.....:........:....xx.......x:.....x.:...:...........:.....:....................x.:.........x.x......x...........:..:....:-------.......x.:x.-----..:.....-------..x..::...--------:......:.x.----------------------:.:..x..x.x.xx...-------------x.x:xxx.x.......x.:.x...x::.xx....-..x...x..:.:::.x:..x:.:.:..x.:x:x:x...x:x...:...x......:.xx:xx..x.:.x.x:...:...x...x..:::.:.....x:.x.x..x........:x:..x.:.:-:....x...x.:x.....-------x........xx.:.:...x:.x.x....:....xx.x.... 6M2I110M3D16M4I28M1I37M166D227M7D12M5D8M7I10M8I11M22I17M13D34M1I123M1I18M7D41M 507/698 72.6% 744/94230402 0.0% 247/698 35.4% 21577918 NA +5396 chr4 + 190214555 46977055 46977054 46977161 107 ACTTACAACTCCCGAATTTCAAAGGGCATGCATGACCATCCATGGGAAAATCCACCAATCTCATGGGACACTCCGCACTTATGGTGAGTCTATGATGAAAAATGCAA chr4 - 94230402 83353633 83353632 83353739 10876664 10876663 10876770 107 ACTTACAGCTCCCAAATTTCAGCGGGCATGCGTGCACATCCATTGGGAAGTCCTCCAGGTGCATGGGGCACTCTGCATGAATGGTTAGCCTACAAGACAGAACACAA .......:.....:.......:x........:..xx.......x..:..:...x...:x:x......:.....:...:xx.....x..:...::.x:x.:..::... 107M 77/107 72.0% 107/94230402 0.0% 0/107 0.0% -36376578 -57853824 +7699 chr4 + 190214555 46977209 46977208 46977381 173 AAAATAGGAAGGAAGGGAGGGAAGGAGGAAGGAAGAAGGGAGGGAAGAAAAGGAAGGAAGGAAGGGAAGGAGGAAGGGAGGGAGGAAGGGAGGGAGG-------AAGGGAGGGAGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGAAAGGAAAGGAAAGAAAGAAAAGAATAAAAAAG chr4 - 94230402 67066515 67066514 67066694 27163709 27163708 27163888 180 aagagagagagaaagagagaaagagagaaagagagagagagagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaagaaagaaagaaaagaaagaaagaaagaaagaaagGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGG ..:.x..::..:...:...::.::...:...::...::.:::.::...:..:...:...:...:.:...:.:...:.:.:.:.:...:.:.::..::-------...::..::..:...::..::...:..............:.:....:xx..::.x.....::...:........:. 97M7I76M 112/173 64.7% 180/94230402 0.0% 7/173 4.0% -20089306 -74141096 +3080 chr4 + 190214555 46977222 46977221 46977275 54 AGGGAGGGAAGGAGGAAGGAAGAAGGGAGGGAAGAAAAGGAAGGAAGGAAGGGA chr4 - 94230402 23411596 23411595 23411649 70818754 70818753 70818807 54 AGGGAGGGGTACAGGAAAGAGCAAGGGAGGAAAACAAAGGGAGGGAGGATGGGA ........:x:x.....:..:x........:..:x.....:...:....x.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 23565626 NA +3391 chr4 + 190214555 46977237 46977236 46977347 111 AAGGAAGAAGGGAGGGAAGAAAAGGAAGGAAGGAAGGGAAGGAGGAAGGGAGGGAGGAAGGGAGGGAG----GAAGGGA--GGGAGGAAGGGAGGGA---GGAAGGAAGGAAGGAAGGAA chr4 - 94230402 12888292 12888291 12888411 81341992 81341991 81342111 120 AATAAAGTTGGGTGAAAAAATAAGGAAGGAAAGAAGGGATTGAGGAAGGGAGGGGACAGGTAGAGGTGTCTTGAAGAGATTGGTAAATAGGCAGAAATGCAGAAGTAAAGAGGGTGGGAA ..x:...xx...x.::..:.x..........:.......xx.............::x.:.x:::..x.----....:..--..x.::x...x..::.---:....x..:..:..x:.... 68M4I7M2I16M3I20M 76/111 68.5% 120/94230402 0.0% 9/111 8.1% 34088945 NA +11284 chr4 + 190214555 46977375 46977374 46977633 259 AAAAAAGGAAGGGAAGAAGTAAAAAAAAATAT-TACCTCATTGTGTATAAAATAGTACCATTTCTCATAATTCTAAAAAGCTTATTTGGAGCTGTCATATTATGTGAGACAGATTTCTTTCCATTCCTGAAGAAAGTATCAGGGGTCCACACTTTCGTTACCATCATATTGTTCAATCTCAAAATTTCAATGGGGCCGTCATATTTTAATCTTTTGTCAATCCATGTCTGCCTGAAGAACACATCCATTGTGTATTCCTA chr4 - 94230402 25244540 25244539 25244799 68985604 68985603 68985863 260 AAAAAATAACACGAACAGAGAAAAAAAAATACATACCTCATGGTGTACAGAAGAGTTCCATCATCTTGAATTCTTAGAAGCTTGTTAGGCATTGTCATGTTATGAGCGACTGACTTTTTCCCATTGTGAAAAAAAGTATCTGGAGTCCAGATTTTGCTGGCCATTAAATTGTTCAATCGAAGAATATTCATTGGGCCCTTAAATTTTAACCGCTCATCCTTCCATCTCTGACGGAAGAAGACATCTATTGTGTATTCCTA ......x:.x:x...x.::x...........:-........x.....:.:..x...x....:x:::xx......x.:......:..x..x::......:.....x.x...x..:..:..:.....x:x:..:........x..:.....x.:...xx.x:....:.x...........xx.:...x.:x..x.....x.:.x.......:.x:.::..xx.....x....x.x......x.....:.............. 32M1I227M 186/259 71.8% 260/94230402 0.0% 1/259 0.4% 21732835 NA +9137 chr4 + 190214555 46977406 46977405 46977632 227 TTACCTCATTGTGTATAAAATAGTACCATTTCTCATAATTCTAAAAAGCTTATTTGGAGCTGTCATATTATGTGAGACAGATTTCTTTCCATTCCTGAAGAAAGTATCAGGGGTCCACACTTTCGTTACCATCATATTGTTCAATCTCAAAATTTCAATGGGGCCGTCATATTTTAATCTTTTGTCAATCCATGTCTGCCTGAAGAACACATCCATTGTGTATTCCT chr4 - 94230402 83361941 83361940 83362167 10868236 10868235 10868462 227 TCACCTCATTGTATACAGGAGCGTGCCGTTATCCACCAGGCGCAGCAGCTTGTTGGGTGTTGTCATGTTATGGGCAACAGATTTCTTCCCATTGTGGAAGAAAGTATCAGGAGTCCAGATCTTACTGGCCAGCAGGTTGTTCAGAGGAAGGATCTTCATGGGACCATCGAACTTCAGCCTCTCATCTCTCCAGGATTGCCGGAAAAAGACATCAATGGTGTATTCCT .:..........:..:.::.xx..:..:..x::..:x.xx.xx.:x.....:..x..x.:......:.....x.x:...........:.....x:x...............:.....x.::..xx.x:...x..x:.......:xxxx.::..:.:x.....:..:..:x.:..:.::..:.::..xx....x.x:....x...:..x.....x..x.......... 227M 153/227 67.4% 227/94230402 0.0% 0/227 0.0% -36384535 -57845867 +7786 chr4 + 190214555 46978934 46978933 46979150 217 CTTTGTGTGATTGACAACAAAATA----AATATTAATTG------CCCTCTTTTCTACA-----TGTTTTCTTCAAGTCTCAAAAGGTACATTAAACTTCGAAAATACCTACCATTTCAACATCAGAAACAGGTCCAAAGCTGGTGACATATATGTCAGTTTTCACTTCTGTAACAGGACCTAACGGGTATGAAGTAAATAAGTGTGAAAAAATAATTACCAATTTTACAGG chr4 - 94230402 25402346 25402345 25402571 68827832 68827831 68828057 226 CTTTGTATGATTGACAGAACAGTACAGAGACATGAATTAAGCATCCACTCCTTATTGCAGTTAATGCTTTCTCAGAAACAGGAAATAGCATTTTAATTCCAGCAATACATACCATTTCTACATCAGAAACAGGTCCAAAACTGGTGACATATATATCTGTTTTGACTTCAGTAACAGGACCTAATATATGAAAAGGAAGTGAGCAGGAAAATGTG------AATTTTGTAGG ......:.........:x.x.:..----:.:..x....:------.x...:..x:.:..-----..:.....:x:.:x.xx:...x:xxxx..x..:.:.::x.....x.........x....................:..............:..x.....x.....x..............::x:.:x:...x..:.:..::x.....x:.:------......::... 24M4I11M6I14M5I151M6D11M 151/211 71.6% 226/94230402 0.0% 21/211 10.0% 21576588 NA +3742 chr4 + 190214555 46979021 46979020 46979120 100 AAATACCTACCATTTCAACATCAGAAACAGGTCCAAAGCTGGTGACATATATGTCAGTTTTCACTTCTGTAACAGGACCTAACGGGTATGAAGTAAATAA chr4 - 94230402 25252745 25252744 25252840 68977563 68977562 68977658 96 AGAAACTCACCATGTCTGTGTCTGAAACAGGTCCAAAACTGGTCACATATATGTTGGTGAAGACTTCAGTAATA----CTATCTGATATAAAAAGAAAAA .:.x..::.....x..x:::..x..............:.....x..........::..xxxx.....x....:.----...x.x.:...:..:x:..x.. 74M4D22M 68/96 70.8% 96/94230402 0.0% 4/96 4.2% 21726276 NA +7490 chr4 + 190214555 46992825 46992824 46992982 158 TACCCCCAAATCCAGGACGCAGCCTGTTGTCATAACCATCGAGCAAACTGTCCAGGATGCGGGTGAAATTTTCTGTGCACAATTTCTCCTCCTTTTGGTTCTGTCCTGGGGATTCGTTTAAACTGCAAGCGAAAAAAAAAAAACCGGGGGCGGAGGAG chr4 - 94230402 25411699 25411698 25411847 68818556 68818555 68818704 149 TACCTCCGAATCCCGGGCGCAGGCGGTTGTCATAGCCATCCAGGAGACTGTTGAGGATGCTGGTGAAATTCTCCGGCCACAATTTCTCCTCTTTCTTGCTCTGTCCCGGCGGCCCGGTGAGACTACGAGGCAAAGA---------GGGAGCGGGTGAG ....:..:.....x..:.....x.x.........:.....x..x.:.....:x.......x.........:..:.xx..............:..:.x.:.......:..x.:::..x.x.:...:.:..xx...:.---------...:....:x... 136M9D13M 112/149 75.2% 149/94230402 0.0% 9/149 6.0% 21581126 NA +4038 chr4 + 190214555 46992826 46992825 46992892 67 ACCCCCAAATCCAGGACGCAGCCTGTTGTCATAACCATCGAGCAAACTGTCCAGGATGCGGGTGAAA chr4 - 94230402 83382976 83382975 83383042 10847361 10847360 10847427 67 ACCTCCAAGTCCAGGCCTTAGGCGGTTATCATAGCCATCCAACAGCCTGTCCAGGATGCGTGTGAAA ...:....:......x.x:..x.x...:.....:.....x.:..:x..............x...... 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% -36390150 -57840252 +7357 chr4 + 190214555 46993326 46993325 46993520 195 CCAGAGAACTCACCAAACCGCCAGGCACAGGAAGCGCAGGAGGGCGAAACTGACCCCGGCGGACAGAGCGATCGCGGGTACCTTCTTGGCAGAAACCATCTTTGCAACATGCCATACTTCAAGCCTGTTCACGTTTCCAGGCTCTTCAGATGCCCTGAGCAGGGTGCGAGGAGAGGGCAGAGAGGCTCCCGCGGC chr4 - 94230402 25411919 25411918 25412091 68818312 68818311 68818484 173 ccggggTACTCACCACGTCGCCAGGCACAGGCAGTGCAGGAGGGCGATGGAGAGACCCGAGGACATGGCGATGGCTGG---CTCCTTGGCAGAAACCATCTTTG---CATGCCATACTTCACGCCTGGGCACGT----------------TGTccggggcgggggacggcggcggcgccggcagcccccggcggc ..:.:.x........x::.............x..:............x:xx..xx..x.x.....x:.....x..x..---..:....................---..............x.....xx.....----------------..:..x.:..:...x:..:x.:x:.x..x.:x..x.:..x..... 78M3D23M3D27M16D45M 131/173 75.7% 173/94230402 0.0% 22/173 12.7% 21581407 NA +3121 chr4 + 190214555 46994442 46994441 46994500 59 AGTGGGGGGGGAAAGAGAAAATGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629042 81629041 81629099 12601304 12601303 12601361 58 AGTGGACAGAGCAATAGCAC-TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .....:x:.:.x..x..x.x-.x..........:.......x................. 20M1D38M 47/58 81.0% 58/94230402 0.0% 1/58 1.7% -34634600 -59595802 +3139 chr4 + 190214555 46994463 46994462 46994502 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 28012148 NA +3253 chr4 + 190214555 46994465 46994464 46994503 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..................x.................::. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 28012150 NA +3316 chr4 + 190214555 46994467 46994466 46994502 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -34634597 -59595805 +3484 chr4 + 190214555 46994467 46994466 46994506 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................:x.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 28012152 NA +3002 chr4 + 190214555 46994469 46994468 46994503 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -34634595 -59595807 +3128 chr4 + 190214555 46994469 46994468 46994508 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x..................x::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 28012154 NA +3374 chr4 + 190214555 46997705 46997704 46997799 95 CATATAGATGTGTGTGTATATATATGTATGCACACACGTATATATATACACACACATATATATGCACACATACACATATACACATATACATATAA chr4 - 94230402 8395787 8395786 8395873 85834530 85834529 85834616 87 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTAT--------GCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ...:.:x:.:......:...x.:......x:...:.:....--------:.x:....xx...::......:.....:.x.....x..:x...x.. 41M8D46M 61/87 70.1% 87/94230402 0.0% 8/87 9.2% 38601918 NA +3228 chr4 + 190214555 46997719 46997718 46997792 74 TGTATATATATGTATGCACACACGTATATATATACACACACATATATATGCACACATACACATATACACATATA chr4 - 94230402 48167038 48167037 48167103 46063300 46063299 46063365 66 TGTATATAT-----TGC---CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTA .........-----...---..::...:......x...:....:x.:...::.x.........:.......:.. 9M5D3M3D54M 53/66 80.3% 66/94230402 0.0% 8/66 12.1% -1169319 -93061083 +3737 chr4 + 190214555 47002771 47002770 47002843 73 CTCAAAAGACTATGAAGCCAGACTGCTCTTCATTACCATCTGGTGGCTACTGCATGGAGTGGCATTAACCATA chr4 - 94230402 25419736 25419735 25419808 68810595 68810594 68810667 73 CTAAACAAGATACACAGCCTATCTGCTCATCATTACCATCTGGTGGTTGCTGCACAGAGCGGCATTACTCACA ..x..x.::x..::x....x:x......x.................:.:.....::...:.......x:..:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 21583035 NA +3235 chr4 + 190214555 47018024 47018023 47018097 74 TTTCTTCTTCTTTGTCGTCATCTT-CCTCCTCCTCCTCTTCTTCCTCCTCCTCCTTCTTCTTCTCCCTCTTCCTC chr4 - 94230402 25050941 25050940 25051015 69179388 69179387 69179462 75 TTTGATTTGCCTTGACACCACCCTACCTCCACCTCCTCTCCTTCCCCACCATCCTTTTTTTCTTCCCTTTTCTTC ...xx.:.x.:...x.::..:.:.-.....x........:.....:.x:.x.....:..:.::.....:...:.. 24M1I50M 52/74 70.3% 75/94230402 0.0% 1/74 1.4% 21967083 NA +3547 chr4 + 190214555 47018075 47018074 47018199 125 CCTTCTTCTTCTCCCTC-TTCCTCCTCTGCCTCCTCTTCTTCTCCTCCTCATCCTCCTCCTCTTTCTTCTTCCT----------TTTTCCTCCTCCTCCTCCTTTTTCTTCTTCT-CTTCTTCTTCTTTCTTTTTTT chr4 - 94230402 79478400 79478399 79478536 14751867 14751866 14752003 137 CCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTT ....:..:x.......:-x.::.x....xx..::..x...:.:.:..:.:x.xx.......::.......x...----------.....x:x..:....x...:....::.:x..-.:..xx:..x......:.x.. 17M1I56M10I31M1I21M 84/125 67.2% 137/94230402 0.0% 12/125 9.6% -32460325 -61770077 +3017 chr4 + 190214555 47019590 47019589 47019727 138 CTCCCTCCCTTCCTCCCTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTCTTTCCT chr4 - 94230402 69007394 69007393 69007531 25222872 25222871 25223009 138 CTCCATTCTTTTCAATCTTCTTTTTTTCATCCTTTCCTAAGTCTTTTTGGTGTGTTTCTTCTTTTCTCTTTTCCTGTTCTCATTATGACTCTCAGGTTGGTTTTTTTTGACTTTTTCCATAGTTAATTCATCTTCCCT ....x.:.:..:.xx:.......:....x.:..:..::xxx::..:..xx.x.x......::.....:.:..:..x.::.:x..x:xx::..:xxx.:xx.:..:...xx:.:.....x.xx..xx...x....:... 138M 79/138 57.2% 138/94230402 0.0% 0/138 0.0% -21987804 -72242598 +3048 chr4 + 190214555 47019639 47019638 47019732 94 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTCTTTCCTTCTTT chr4 - 94230402 83960510 83960509 83960603 10269800 10269799 10269893 94 CCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTT .:...x..:x....:....:.:xx:x:......:..:x...:.:x.x:::.....xx::::..x....:..x..::...........x:.x... 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% -36940871 -57289531 +6002 chr4 + 190214555 47031895 47031894 47032025 131 CCCTACTTCTTCCCCTTAGCACCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACAGATTGCTCAAAGGATATGACATTCGCTTGCGGCCGGACTTCGGAGGTAACGCTTCATCTTTTTTC chr4 - 94230402 25428894 25428893 25429022 68801381 68801380 68801509 129 CTCTGCTCCTTCCC-GCAGCGCCGACGAGCCCAGCAATATGTCCTACGTGAAGGAGAC-GCGGACAGGCTGCTGCACGGCTACGATATCCGCCTCGGGCCTGACTTCGGAGGTGAGGCGCCCGCACTTTTC .:..:..:......-x:...:..:.:..:........:.....x........:.....-.:......::....xx.x..x..:..:..:...:.xx....x............:.x..x:.xx.x:..... 14M1D43M1D72M 95/129 73.6% 129/94230402 0.0% 2/129 1.6% 21603001 NA +5020 chr4 + 190214555 47032414 47032413 47032508 95 CAGGGCCCCCCGTCGACGTTGGGATGCGGATCGATGTCGCCAGCATAGACATGGTCTCCGAAGTGAATATGGTGAGTGGCCTCCCGAGGGGCCCG chr4 - 94230402 25429082 25429081 25429176 68801227 68801226 68801321 95 CAGGTCCGCCCGTCGACGTGGGCATGCGGATTGAGATCGCCAGCATCGACGTGGTGTCGGAAGTCAACACGGTGAGTAGCGGCGGGACGGGGTCG ....x..x...........x..x........:..x:..........x...:....x..x.....x..:.:.......:..xx.xx..x...x:.. 95M 73/95 76.8% 95/94230402 0.0% 0/95 0.0% 21603332 NA +3561 chr4 + 190214555 47037491 47037490 47037573 83 CTTTGCCTGTCTGTTTGGAGATA-GCATATATATATTCGT-----------TTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTACTC chr4 - 94230402 66916715 66916714 66916809 27313594 27313593 27313688 95 CTTAGTCTACCCCACTAGGGATATATACCTATATACCTGTCCAAAGCATGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTC ...x.:..::.:xx:.:.:....-::.:x......:::..-----------.........................:........x.....x... 23M1I16M11I44M 63/83 75.9% 95/94230402 0.0% 12/83 14.5% -19879224 -74351178 +3008 chr4 + 190214555 47037516 47037515 47037568 53 ATATATATATTCGTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTT chr4 - 94230402 70541020 70541019 70541072 23689331 23689330 23689383 53 ATCTGTTTGTTGGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTTTTTCTTATCT ..x.:.x.:..x...x......................:..x....:..x.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -23503504 -70726898 +3294 chr4 + 190214555 47037516 47037515 47037576 61 ATATATATATTCGTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTACTCTAA chr4 - 94230402 60385936 60385935 60385990 33844413 33844412 33844467 55 ATTTATATATT-GTTGTTTTTT-----TGTTGTTGTTTTTTGCTTTTTTTTTTTACTTTGA ..x........-...x......-----...............:..............:.:. 11M1D10M5D34M 50/55 90.9% 55/94230402 0.0% 6/55 10.9% -13348420 -80881982 +3176 chr4 + 190214555 47037518 47037517 47037571 54 ATATATATTCGTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTAC chr4 - 94230402 28957750 28957749 28957803 65272600 65272599 65272653 54 ATGTACAGTCTTTTTTGTTTGATGTTGTTGTTGTTGGTTGGTTTTTTTTTCTAC ..:..:.x..x.....x....x.............xx...x.........:... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 18079768 NA +3165 chr4 + 190214555 47037519 47037518 47037568 50 TATATATTCGTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTT chr4 - 94230402 17488388 17488387 17488437 76741966 76741965 76742015 50 TGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT .:.x.:..:.x:...................:..........x...x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 29549131 NA +3085 chr4 + 190214555 47037525 47037524 47037580 56 TTCGTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTACTCTAAGCCA chr4 - 94230402 89666548 89666547 89666603 4563800 4563799 4563855 56 TTGATTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTGTTAGAAAACA ..x:...................:.....x.xx............::.xx..:x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -42629023 -51601379 +3004 chr4 + 190214555 47037528 47037527 47037581 54 GTTTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTTTTTTTTACTCTAAGCCAC chr4 - 94230402 32236564 32236563 32236617 61993786 61993785 61993839 54 GCTTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTCTTTCTGAAAGTTAC .:.......................x.:xx:........:..x..xx...::.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 14800964 NA +4339 chr4 + 190214555 47049451 47049450 47049632 182 AGCTCTTCTGAATTCTTCCAGTGAACACTGAGAGAGAAATCAAATAGTAATATGTAAAGGTCAGATCATTTCATCACTGTCC-TTTCAGAACAGGGAAATTACATT-----------ATGAAATGCAAATGG-------CATC-CGAGGTTAAAATAGCAAGTTATTATTACCACATAGCTTACAGGAGGTATTTTTCACTT chr4 - 94230402 25435450 25435449 25435650 68794753 68794752 68794953 201 AACTGATTTTATTTTTTCCAACAAATAAGGAAAAACTAGCCAAGTAATAATGTATAAAGGTCAGATCATTTCACCACTGTCTGCTTCAAGTGTAAGTAATTATGTTAGCAGTGAAACATGGAATGAATGTAGAAATCAACATCTTGAGGTTAAGCAGCGAGGTCACTGTTATTGGATGTCTTGTTGG-GTTGTTTTTCATTT .:..xx.:.x.x..:.....:::..:.xx..:.:.xx.::...:..:....:.:...................:.......:-:....::xxx::.x.....::..-----------...:....x.x:.:.-------....-:........:xx:xx.:..:.:.:...:::x..:x...::x..-.x.:.......:.. 82M1I23M11I15M7I4M1I43M1D14M 117/181 64.6% 201/94230402 0.0% 21/181 11.6% 21614001 NA +3483 chr4 + 190214555 47077922 47077921 47078005 84 TTATATATATTATATATTTTATATA-TATTATATATTTTATATATATATTTTATATATAATATATAATATATAATATATATATAT chr4 - 94230402 67910061 67910060 67910145 26320258 26320257 26320342 85 TTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGT ...:.....:x...:xxxxx.....-.....x...:x.x...x.......x......xx...........:..:......:..:. 25M1I59M 63/84 75.0% 85/94230402 0.0% 1/84 1.2% -20832139 -73398263 +3041 chr4 + 190214555 47092129 47092128 47092182 54 CATTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339957 49339956 49340010 44890393 44890392 44890446 54 CATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ..........:xx.x.x.....:::.:...:...:...............::.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -2247828 -91982574 +3050 chr4 + 190214555 47092133 47092132 47092189 57 TCTTTTCTTTTTCTTTCTTTCTTTCTTT--CTTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193311 40193310 40193369 54037034 54037033 54037092 59 TCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTT ........:.:...x.....:x:..:.:--.:...x:................:..... 28M2I29M 45/57 78.9% 59/94230402 0.0% 2/57 3.5% 6898822 NA +4038 chr4 + 190214555 47123732 47123731 47123869 138 ATATATTATTATATATATAATATATTATAATATATTATATATCATATATTATTATATATAATATATTATATATCATATATTATATATTATAT-----TATATTATATATTATATTATATATATTATATCATATATATGATATA chr4 - 94230402 51771622 51771621 51771763 42458640 42458639 42458781 142 ATATATAGTAAT-TATATATGGTATTCTTATATATAATATAGTATTTAGTATTATGTAGTATATTTGATATAATTGTAATTATATATAGAATGCTTGTATATAGTGCAGTATACAGTATTTTATATATCAGATATTTGATATA ......x:.x..-......xx:....x.x......x.....x:..x..x......:..xx....x.x.....x:xxxx.........x:x..-----.....x:.::.x....:x:...x.xx.......x....x....... 12M1D79M5I46M 97/137 70.8% 142/94230402 0.0% 6/137 4.4% -4647890 -89582512 +4591 chr4 + 190214555 47123785 47123784 47123943 159 ATATATAATATATTATATATCATAT-ATTATATATTATATTATATTATATATTATATTATATATATTATATCATATATATGATATATA----TCTTATATATAATATATATAATATATAATATATTATATATTAATATATGATATATAATATATTATATATATT chr4 - 94230402 51771622 51771621 51771774 42458629 42458628 42458781 153 ATATATAGTA-ATTATATATGGTATTCTTATATATAATATAGTATTTAGTATTATGTAGTATATTTGATATAATTGTAATTATATATAGAATGCTTGTATATA----GTGCAGTATACAGTATTTTATATATCA------GATATTTGATATACTTGACATGTT .......:..-.........x:...-x........x....x:....xx:......:.x:.....x.x....x..xxxx..x.......----x...:......----:.::.:....:.:...x........:.------.....x.:.....:.xx.:..:.. 10M1D14M1I62M4I11M4D27M6D24M 110/148 74.3% 153/94230402 0.0% 16/148 10.8% -4647837 -89582565 +4042 chr4 + 190214555 47123830 47123829 47123904 75 ATATATTATATTATATATATTATATCATATATATGATATATATCTTATATATAATATATATAATATATAATATAT chr4 - 94230402 67910065 67910064 67910139 26320264 26320263 26320338 75 ATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATAT .....:x...:..x.x....xx...:.x...:..:...x....x..:......:............:..:..... 75M 58/75 77.3% 75/94230402 0.0% 0/75 0.0% -20786235 -73444167 +3021 chr4 + 190214555 47136513 47136512 47136576 64 AAATTAAAAAAAAATATATAAAAACAAAGAATGAATCAAAATACTGCTAAATTTGTCTAGAAGA chr4 - 94230402 68101982 68101981 68102045 26128358 26128357 26128421 64 AAGTAAAAAAGCAACATTAAAAAATAAAGAATGAAACAAACTACTGTGGAATTTTTCTTGGAAA ..:.x.....:x..:..xx.....:..........x....x.....:x:.....x...x.:.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -20965469 -73264933 +3155 chr4 + 190214555 47140753 47140752 47140790 38 GTTGTTTTTTGTTTTTTTTTTTTCCTAAAAGACCAGAA chr4 - 94230402 43380894 43380893 43380931 50849472 50849471 50849509 38 GTTGTTTTTTGTTTTTTTTTTTTCCTAAAAAACCAAGA ..............................:....::. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 3759859 NA +13193 chr4 + 190214555 47161206 47161205 47161533 328 ATAGTAAAATTCTTTTTTTTTTTTTGCTTTCTTTATTTCACAGGATTATACACTCACCATGTATTTCCAGCAGTCTTGGAAAGACAAAAGGCTTTCTTATTCTGGAATCCCACTGAACCTCACCCTAGACAATAGGGTAGCTGACCAACTCTGGGTACCAGACACCTACTTTCTGAATGACAAGAAATCATTTGTGCATGGGGTCACAGTG-AAAAATCGAATGATTCGACTGCATCCTGATGGAACAGTTCTCTATGGACTCCGGTAAATGGCTTTATGTTGCATGTTTTAATGTTGTTGTTGTTTTGTTTCATTTTAAACTTTTGGA chr4 - 94230402 25477285 25477284 25477586 68752817 68752816 68753118 302 ATAGAAAAAACCCTTCTTATTACTTCTCT------------AGGACTACACCCTTACCATGTACTTCCAGCAGTCCTGGAGGGAGAAAAGGCTCCCTTATTCTGGAATATCTCTGAACCTAACGCTGGACAACAGAGCAGCTGACCATCTCTGGGTGTCTGACACATATTTCCAAAATGACAAGAACTCCTTTGTCCAGGGGGTGATGGTGAAAAAAACAAACGATTCAGTACCATCCAGATGGGACAGTCCTTTATGGCCTACGGTA--------TGTTCTGGGTGTTTC-------CTGTTTGTTTGTTTTAAATCAGATGTATGGA ....x....x:.:..:..x..x:..x::.------------....:..:..x..:........:...........:....::..x........::.............x:.x........x..x..:.....:..:.:.........x........::.x.....x..:..:.x:...........x..x.....x..x.....x.::...-.....x.:..:.....:::xx.....x.....:.....:..:.....x..x.....--------.:.x:..x:.....:-------:....xx.......:.xx.:.:.:x.x.... 29M12D170M1I56M8D15M7D31M 223/301 74.1% 302/94230402 0.0% 28/301 9.3% 21683921 NA +12790 chr4 + 190214555 47161237 47161236 47161476 240 TTTATTTCACAGGATTATACACTCACCATGTATTTCCAGCAGTCTTGGAAAGACAAAAGGCTTTCTTATTCTGGAATCCCACTGAACCTCACCCTAGACAATAGGGTAGCTGACCAACTCTGGGTACCAGACACCTACTTTCTGAATGACAAGAAATCATTTGTGCATGGGGTCACAGTGAAAAATCGAATGATTCGACTGCATCCTGATGGAACAGTTCTCTATGGACTCCGGTAAATG chr4 - 94230402 83468826 83468825 83469065 10761338 10761337 10761577 240 TTTCTCTCCTAGGACTACACCATCACCATGTACTTCCAGCAGAGCTGGCGGGACAAACGCCTGGCATATAACGACCTTCCTCTCAACCTGACCCTGGACAACCGGGTGGCCGACCAGCTGTGGCTGCCAGACACCTATTTCCTGAATGACAAGAAGTCCTTTCTGCATGGGGTGACGGTGAAGAATCGCATGATTCGGCTCCATCCTGATGGGACAGTCCTGTATGGCCTGAGGTAGGTG ...x.:..x:....:..:..xx..........:.........xx:...x::......x.x..xx.x...xx:.:xx.:..x..x.....x.....:.....:x....:..:.....:..x...x.:...........:..:..............:..x...x..........x..:.....:.....x........:..x...........:.....:..x.....x..xx....::.. 240M 182/240 75.8% 240/94230402 0.0% 0/240 0.0% -36307589 -57922813 +3159 chr4 + 190214555 47174140 47174139 47174241 102 CTGCAACCTCAACCTCCCAGGCTTAAGCAATATGCCTGCCTCAGCCTTCCAAGTAGCTGGCACCACAGGCACACGCCCAGCTAATTTTTTGTGTCATCATTT chr4 - 94230402 18197126 18197125 18197217 76033186 76033185 76033277 92 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC----------TGTGTATCATCCTTT ..:..:..:x..x..:.::..:.:...::x.x::.xx.x.........:...........x..:...x.::...xx.----------.x...:.....x... 77M10D15M 62/92 67.4% 92/94230402 0.0% 10/92 10.9% 28977014 NA +3995 chr4 + 190214555 47174873 47174872 47175020 148 CTCCCTCCCTTCCTTCTT-TCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCCTTCCT-----TCCCTCCTCCTTCCTTCCTTCTTTTCTTCCTTCCTTTCATCATTCCTTCCTTCCTCCCTTCCTTCCTCT-------CTCTTCCTTCTTT chr4 - 94230402 32363141 32363140 32363301 61867102 61867101 61867262 161 CTCTTCTCATTCCTTCATATCTTTTCCTGCTGCCCTTTTGTCTCAGTGTCTCTGGGCCTTCCTGCCCAGACCTCCCATCTTCTTCCTGCCTTCTTATCTTCCTTCCACTTCTGATTTCTTCTCGCCTAGCTCTCTACTTTTAGACATGCTTTTCCTTTTCT ...::::.x.......x.-..:..:.:.x..x..:.:..x:..:xx.x:..::xxx.:.....x..:-----....x:..:......x.......x..........x:.:x.x...:....::x...xx..::..x.:.:.-------..:......:.:. 18M1I48M5I69M7I13M 96/148 64.9% 161/94230402 0.0% 13/148 8.8% 14811732 NA +3505 chr4 + 190214555 47174932 47174931 47175022 91 CCTTCCTTCCCTCCTC---------------CTTCCTTCCTTCTTTTCTTCCTTCCTTTCATCATTCCTTCCTTCCTCCCTTCCTTCCT---CTCTCTTCCTTCTTTCT chr4 - 94230402 93005083 93005082 93005191 1225212 1225211 1225320 109 CCATCCTCCCCTCCCCGTGCAGCTGCCTGGGCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCT ..x....:......:.---------------..:x:...........x........:x:x.:..:.:...::..:..x......:x...---.....xx:.:....... 16M15I58M3I17M 67/91 73.6% 109/94230402 0.0% 18/91 19.8% -45830151 -48400251 +3103 chr4 + 190214555 47175095 47175094 47175154 60 TCCTTCCTTCCTTCCTCTTCCTTCCCCTTCTTTCCTTCCTTTCTTCTTTCCTCTCTCTTT chr4 - 94230402 83554928 83554927 83554987 10675416 10675415 10675475 60 TCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCCAATTT ..x..:....:::..:..x...:....:..:...:.........:::...:..:.xx... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% -36379833 -57850569 +3729 chr4 + 190214555 47175109 47175108 47175219 111 CTCTTCCTTCCCCTTCTTTCCTTC--CTTTCTTCTTTCCTCTCTCTTTTCTTCTTTCTTTATCTTTCTTT--CTTTTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTCTTT chr4 - 94230402 39104425 39104424 39104539 55125864 55125863 55125978 115 CTTGCCCTGCCCCTTCTCCATTGCAGCTTGCTCTTTACATCTCTCTGTTCTTTTTTCTTCATGTGTTTTTGCCATTTTTTCCCCTCACTCTGACCCTTGCTTTCCCTCCTCTTTT ..:x:...x........::x:.x.--...x..::..x.x.......x.....:......:..x.x.:...--.x...:..:.:...x....xx::...x.....::..::::... 24M2I44M2I43M 75/111 67.6% 115/94230402 0.0% 4/111 3.6% 8070684 NA +3156 chr4 + 190214555 47175125 47175124 47175177 53 TTTCCTTCCTTTCTTCTTTCCTCTCTCTTTTCTTCTTTCTTTATCTTTCTTTC chr4 - 94230402 54255905 54255904 54255957 39974446 39974445 39974498 53 TTGCACTCTTTTCTTTATTCCTTCCTCTTTTCTTCTTTCTTTATTTTACTGTC ..x.x:..:......:x.....::....................:..x..x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -7080780 -87149622 +3207 chr4 + 190214555 47206803 47206802 47206887 85 ATTTGTTCTCTAATAAATACAATATATT-----AAAAGTTTATTGAATTATAATATATATGTATATATATGTGTGTGTGTATGTATATAT chr4 - 94230402 26564483 26564482 26564571 67665832 67665831 67665920 89 ATGTGTTATCTAGTGAAC-CATTGTACTCTGGGAGTAGTTTTTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ..x....x....:.:..:-..x.:..:.-----.:x.....x.....x:xx.:.xx..x.:.......:..................... 18M1D9M5I57M 63/84 75.0% 89/94230402 0.0% 6/84 7.1% 20642320 NA +3428 chr4 + 190214555 47232950 47232949 47233023 74 CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTTCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:...........::x...x:xx.x........::x:.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 29035824 NA +4583 chr4 + 190214555 47239941 47239940 47240156 216 AGGACCCTTCTTTTTCTTGTGTTTCACTTAGTAAAATTAGTCACCACACATGGTGGATTAGCAGCAGCAGCTCAGTTTCCTTGGATTTACATGAATTTATTCTCAGTGGGGAGATCAAGAGGCAATTTACTCAGTTGCTGGCCTTGTTAGGAGTTACCA----TCTGACCCTGCAGCTCAGTCTGAATAGCATGCTTATGATTATTTATTATTTGGGATG chr4 - 94230402 25490435 25490434 25490652 68739751 68739750 68739968 218 AAGATTTTTATTTTACTTATAGTTCTGCAAG-GAAATTAGTCACCGCACACGGTAGATTAACTGCTGCAGCTCAGCTTCTTCAGGTGCACTTGAGTTTTCTCAGAACATATGAATCAAGACATAA-TTACTCTGCCAGCATCACTGACTGGAATTATTAGTTTTCACATTCTGCTACTCATCTGGGACAAATGGGGTGTGCTTACTATCTAGTCAAGATG .:..:::..x....x...:.:x...xx:x..-:............:....:...:.....:.x..x.........:...:.::.:.x:..x...:...x:..xx.:::x:x::.......x::..-......x.:::x::x.x:..x:x...:...::.----..xx.::....x:....x::x.:.:.:xxx.xx.:..x...:.xx:..x.:::.... 31M1D93M1D33M4I57M 126/214 58.9% 218/94230402 0.0% 6/214 2.8% 21749506 NA +3301 chr4 + 190214555 47246277 47246276 47246338 62 CATATATATATATATATATATATACACACACACACACACACACACACACACACATATGTACA chr4 - 94230402 8395809 8395808 8395870 85834533 85834532 85834594 62 CATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:...x..:....:...::x....:xx.:.................x.....x...x.:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 38850468 NA +3059 chr4 + 190214555 47246280 47246279 47246353 74 ATATATATATATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATAT chr4 - 94230402 4481692 4481691 4481764 89748639 89748638 89748711 73 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT-TATCTAGGTAT .....x:.:.:.:...:.::...x...:.....:x....:..x.xx...:.........:..-...x..x:... 62M1D11M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% 42764588 NA +3215 chr4 + 190214555 47246284 47246283 47246369 86 ATATATATATATATATACACACACACACACACACACACACA------CACACATATGTACATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:.......:...........x:x...:..:..::------::.....:.:.xx.x::..x..x.....:.:....x...x..... 41M6I45M 60/86 69.8% 92/94230402 0.0% 6/86 7.0% 42828941 NA +3935 chr4 + 190214555 47246286 47246285 47246398 113 ATATATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATA-TATATATATATATATATAAA chr4 - 94230402 4417343 4417342 4417456 89812947 89812946 89813060 114 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAA ..x..x.:...................x:x...:..:..::x:x:.x..:....:...xx.x::..x..x.....:.:....x...x.....:-:.:.x.:.:xx.:....... 93M1I20M 76/113 67.3% 114/94230402 0.0% 1/113 0.9% 42828943 NA +3572 chr4 + 190214555 47246287 47246286 47246394 108 TATATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x..:.....:.:.....x.x:..::x::.....:...:.x:..:.::x:.....:.:x:..:.....x...:::x:.:.x.x.:.:.:..:.... 108M 64/108 59.3% 108/94230402 0.0% 0/108 0.0% -25874815 -68355587 +3575 chr4 + 190214555 47246288 47246287 47246379 92 ATATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:.....:.............x:x...:..:..::x:x:.x.:..:..:...xx.x::..x..x.....:.:....x...x..... 92M 62/92 67.4% 92/94230402 0.0% 0/92 0.0% 42828945 NA +3333 chr4 + 190214555 47246290 47246289 47246381 92 ATATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:...:.:.............x:x...:..:..::x:x..x:::.:..:...xx.x::..x..x.....:.:....x...x..... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 42828947 NA +3333 chr4 + 190214555 47246292 47246291 47246383 92 ATATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:.:.:.:.............x:x...:..:...:x.x::x.::.:..:...xx.x::..x..x.....:.:....x...x..... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 42828949 NA +3154 chr4 + 190214555 47246293 47246292 47246345 53 TATATATACACACACACACACACACACACACACACACATATGTACATATATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x:.x...........x.........:x:.:..:.......:....... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -40126448 -54103954 +3099 chr4 + 190214555 47246294 47246293 47246348 55 ATATATACACACACACACACACACACACACACACACATATGTACATATATATATA chr4 - 94230402 38535895 38535894 38535949 55694454 55694453 55694508 55 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ............::...::x:x.:.....:........:....::...::...:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 8710399 NA +3131 chr4 + 190214555 47246294 47246293 47246359 66 ATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......::..::.........:...........:.:x..x..x..x:.:....:.xx:...:::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -19658553 -74571849 +3464 chr4 + 190214555 47246294 47246293 47246385 92 ATATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x...:.:.:.............x:x...:..::...x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 42828951 NA +3049 chr4 + 190214555 47246296 47246295 47246387 92 ATATACACACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x...:.:.:.............x:x...:.::::.:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 42828953 NA +3069 chr4 + 190214555 47246303 47246302 47246377 75 CACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x:..:::..::..:.:.........x..:.......x.x.:...::..:.:.x.::..:.:x....:.:.:. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% -24383828 -69846574 +3197 chr4 + 190214555 47246304 47246303 47246389 86 ACACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417349 4417348 4417434 89812969 89812968 89813054 86 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ...:.:.:.............x:x.....:.:.::x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 42828955 NA +3146 chr4 + 190214555 47246306 47246305 47246404 99 ACACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATACCA chr4 - 94230402 4417349 4417348 4417447 89812956 89812955 89813054 99 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTA ...:.:.:.............x:x.:..:::...:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x.....::xxx...:..:. 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 42828957 NA +3140 chr4 + 190214555 47246307 47246306 47246353 47 CACACACACACACACACACACACATATGTACATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x.:...:...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -40126440 -54103962 +3057 chr4 + 190214555 47246308 47246307 47246393 86 ACACACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417349 4417348 4417434 89812969 89812968 89813054 86 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ...:.:.:.............x:x.::...::..:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 42828959 NA +3131 chr4 + 190214555 47246312 47246311 47246406 95 ACACACACACACACACACATATGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATACCACA chr4 - 94230402 4417349 4417348 4417440 89812963 89812962 89813054 92 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTAT---ATGCCACA ...:.:.:...........:.x.x.....:::..:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x...---..:..... 84M3D8M 61/92 66.3% 92/94230402 0.0% 3/92 3.3% 42828963 NA +3021 chr4 + 190214555 47281208 47281207 47281284 77 AATAATCTGATTAAAAAATGAACAAAAGATGGGAACAGACATTTCTCAAAAGAAGAGATTCAACTGGCCAAGAGAAA chr4 - 94230402 57033128 57033127 57033204 37197199 37197198 37197275 77 AACATTTTGATTAAAAAATAAACAAAAAACATCAATAGCCAATTAAAAAAAAAAATAAATCAGCCAACTAAGAAAAA ..:.x.:............:.......:.::xx..:..x..x..xxx....:..:x:.x...:.:::.:....:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -9751920 -84478482 +3243 chr4 + 190214555 47306392 47306391 47306514 123 AAGGTGCGAAGTAGAGATGGGAGGTGCAGGGTAGAGATAGGAGGAAGGGAGAGGAGAAGGGAGGGAGGAAAAGAGGAAGGAAAGGAGGGAGAGAAAAAGGAAGAAAGGAACCAAGGATGGGAG chr4 - 94230402 65223675 65223674 65223793 29006610 29006609 29006728 119 AAAGTGCAAACTGCTCAAGGGAGTTAC----TATATATGTCAGGAGAAAAGTGAAGTGGGGGTAGGTGAAGAGAGGTAAGGCAGTAGGGAGAAAAAGGAAGATAAAGAAGGCAATGGTGGGAG ..:....:..x.:xxx.x.....x.:.----..x.x..:xx....::::..x.:..x:...:x:.:x...:.....x.:.:x..x.......:...:::::.x....:.:x...x.:...... 27M4D92M 73/119 61.3% 119/94230402 0.0% 4/119 3.4% -17917283 -76313119 +7345 chr4 + 190214555 47320074 47320073 47320215 142 TGAAATGTCATCACTTTTGTAATGTTTTCTTTTTTCTCTCTCCTCT-CTATCAGAATCACAACCACAGCTGCATGTATGATGGATCTTCGAAGATATCCATTGGATGAGCAGAACTGCACCCTGGAGATCGAAAGTTGTGAGT chr4 - 94230402 83483459 83483458 83483601 10746802 10746801 10746944 143 taaaaaataatcattattgttattattatttttttttCTCCCATCTTCTTTCAGGATCACCACCACGGCTGCCTGCATGATGGACCTGCGGAGGTACCCTCTGGACCAGCAGAACTGCACGCTGGAGATTGAGAGCTGTGCGT .:...x:.x....:.x....x..xx..x:......:....:.x...-..x....:.....x.....:.....x..:........:..x..:..:..:..x:....:x.............x........:..:..:....x.. 46M1I96M 108/142 76.1% 143/94230402 0.0% 1/142 0.7% -36163385 -58067017 +5393 chr4 + 190214555 47320104 47320103 47320219 116 TTTTTCTCTCTCCTCTCTATCAGAATCACAACCACAGCTGCATGTATGATGGATCTTCGAAGATATCCATTGGATGAGCAGAACTGCACCCTGGAGATCGAAAGTTGTGAGTTACT chr4 - 94230402 25497754 25497753 25497860 68732543 68732542 68732649 107 TTTTTTGCACCCTCCCCTTACAGGATCACAAC---AGCTGCTTGCATGATGGATCTACACAGATATCCCCTGGATGAACAAAACTGCACACTAGAAAT------TTGTAAGTTACT .....:x.x.:.::.:..xx...:........---......x..:...........x.:x........x:.......:..:........x..:..:..------....:....... 32M3D63M6D12M 84/107 78.5% 107/94230402 0.0% 9/107 8.4% 21822350 NA +3012 chr4 + 190214555 47339543 47339542 47339588 46 GTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGCTTTTATACATATT chr4 - 94230402 20373293 20373292 20373338 73857065 73857064 73857110 46 GTGAGTATGTGTGTGTACGTGTGTATATAATGCATCTATATATATT ...x..:.........::......:.:......x.:....:..... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 26966250 NA +3829 chr4 + 190214555 47344798 47344797 47344880 83 CTCTAACCCCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..x:.:...xx:x..:.::........:.x...x..x.x........::...........:......--:.........:::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 29147672 NA +3990 chr4 + 190214555 47350102 47350101 47350246 145 TTTGAAAAAATATATTGTATTTATTACTTTACATT---AGTTCTTATTTTCTGATTATTTAAAATATTTCCTCTTGGGCTCAGATTATATATATATATATA--------------TATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGGT chr4 - 94230402 33398723 33398722 33398878 60831525 60831524 60831680 156 TCTGAGAAAACTTTTTTTTTTAAACATTCTAAGCTCATAGTTCAGATCTTATGA------GAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgt .:...:....:x.x..x.x..x.x:.:.:..x::.---.....xx..:..x...------:......x:x.x.x..x..x....::.....x..:...x..--------------.:....:.:.......:.:.............x.....x...x.x.. 35M3I16M6D41M14I47M 98/139 70.5% 156/94230402 0.0% 23/139 16.5% 13951379 NA +3682 chr4 + 190214555 47358319 47358318 47358425 107 ATATATATACATGCTATATATATGCATATTATATATGTGTGTGTGTATATATATGTGTGTGTGTATATATGTATATATATATATATAGAGAGAGAGAGAGTGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGC-------GCACAGACCATATAAATGT------ATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:......-------:::..x.::.....x:...------..x..x.x.....:....:.:...::.:.......:.:.x...........x..x..x... 14M7D19M6D61M 69/94 73.4% 94/94230402 0.0% 13/94 13.8% 13959539 NA +3331 chr4 + 190214555 47358364 47358363 47358427 64 TATATATATGTGTGTGTGTATATATGTATATATATATATATAGAGAGAGAGAGAGTGAGAGAGA chr4 - 94230402 33398810 33398809 33398873 60831530 60831529 60831593 64 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:...x..x:x.....:..:.:.:.:..:.:.......:.:.............xx....x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 13959554 NA +3664 chr4 + 190214555 47389078 47389077 47389214 137 TTGCAAGATTGGGTGTTTGGTGGGCAGGCACACTTGGGGAAGTCA-CATCAAGTAATTTAT---CTCTTACACAAAG--------TTCCTCCCCCAGTTCCTCATTGGTTGAGTACTGTGGGGTTACAATTTTCCTGGACATCACCTAA chr4 - 94230402 70187870 70187869 70188018 24042385 24042384 24042533 149 TTGCAGTGGTGGGCTTCCCACAAGCAGGAGCACATGCGGAAAACAGTGTTACACCTTTTATGCCCTATTACTTGACGCTTATCTCTTTCTTCCCTGGTTCCTCATTGGCTGAGTACTTTAGGTTCACAATCTTCCCGATGCTCAACTAA .....:x:x....:x.::x::::.....x:...x..x....:x..-::.:.x::xx.....---..x....x::.x.--------..:..:...::............:........x.:..x.:.....:....:.:xxx...x.... 45M1I15M3I13M8I64M 89/137 65.0% 149/94230402 0.0% 12/137 8.8% -22798792 -71431610 +3072 chr4 + 190214555 47389151 47389150 47389215 65 TTCCTCCCCCAGTTCCTCATTGGTTGAGTACTGTGGGGTTACAATTTTCCTGGACATCACCTAAG chr4 - 94230402 75365042 75365041 75365106 18865297 18865296 18865361 65 TTTCCACCCTGGCTCCTCATTGGCTGAGTACTTCAGGTTCACAATCTTCCCAACGCTCAACTAAG ..:.:x...::.:..........:........x::..x.:.....:....:::xxx...x..... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -27975891 -66254511 +3000 chr4 + 190214555 47393259 47393258 47393321 63 ACTACTTCAGTGTTTTGACTGCAAGCAAAAATGATGAGAATCAGTCCTTGACCTCAAGAAGCT chr4 - 94230402 9943125 9943124 9943187 84287216 84287215 84287278 63 ACTTCTCCAGTGTTGTGACAGCAAGCTCAGGTGACGATGAGCTGTCCTTGGACTCCAGAGGCT ...x..:.......x....x......xx.::...:..x:.x.x.......:x...x...:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 37450134 NA +3260 chr4 + 190214555 47398749 47398748 47398810 62 TAAATTTTTGTGTGAGGTTTTTTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGA chr4 - 94230402 20380482 20380481 20380543 73849860 73849859 73849921 62 TAAATATGTCTTGAAGGTTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTAA .....x.x.x.xx:.....x........................x.x.....x.x...:.:. 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 27018267 NA +17760 chr4 + 190214555 47403311 47403310 47403723 413 GTTTCAGATGGCTATACCACTGATGACATTGAATTTTACTGGAATGGAGGAGAAGGGGCAGTCACTGGTGTTAATAAAATCGAACTTCCTCAATTTTCAATTGTTGACTACAAGATGGTGTCTAAGAAGGTGGAGTTCACAACAGGTGAGGTTGTTTCCCCCAAAATGTACTAGGGGTGCTGTGAAAGGAAGAAGATGGTTCCAACCAAATAATG-----GTCTGATTACTT----------GTCTTT----TGTTTC-TCAACTCAGGAGCGTATCCACGACTGTCACTAAGTTTTCGTCTAAAGAGAAACATTGGTTACTTCATTTTGCAAACCTACATGCCTTCTACACTGATTACAATTCTGTCCTGGGTGTCTTTTTGGATCAACT-ATGATGCATCTGCAGCCAGAGTCGCACTAGGTAATACATTCT chr4 - 94230402 25513947 25513946 25514352 68716051 68716050 68716456 406 GTTTTAGATGGATACACCACTAATGATATTGAATTTTACTGGAATGGAGGAAAGTCTGCAGTAACTGGAGTTAGTAACATCGAGCTCCCACAATTTTCTATAGTTGATTACAAGACGGTATCAAAGAGAGTGGAGTTCCCAACAGGTAAG--------CATCA--------------------GCAAGTTTAAAGCTTCTCCCAGCCCAAAGATAGCAATGTCTAACTTCTTTTAGGGTTCAGTCATTGTACTGCTTCATTCTTTCAGGAACGTATCCTCAGTTATCACTTAGCTTCTGGCTTAAGAGAAATACTGGTTACTTCACTCTGCAAACACATATGCCTTCCACGTTGATCACAATTCTGTCACGGGTATCTTTTTGGATTAATTAATGATGCCTCTGCAGCCAGAGTGGCTCTTGGTAAGCTATTTT ....:......x..:......:....:........................:.:xxx.....x.....x....:...x.....:..:..x........x..x.....:.......:...:..x....::.........x........:..--------.x:..--------------------.x...xxx:...x.xx.:...:..x..x:..:-----....:.:.x...----------...x..----..:...-.:xx:......:.......x.:::.:.....x..:..::.x..x........:.:...........:.:.......x:.:........:..::....:...........x:....:...........:..:.-.......x..............x..x..x.....xx:...:. 150M8D5M20D32M5I12M10I6M4I6M1I132M1I42M 297/385 77.1% 406/94230402 0.0% 49/385 12.7% 21889364 NA +5283 chr4 + 190214555 47403529 47403528 47403719 191 TGATTACTTGTCTTTTGTTTCTCAACTCAGGAGCGTATCCACGACTGTCACTAAGTTTTCGTCTAAAGAGAAACATTGGTTACTTCATTTTGCAAACCTACATGCCTTCTACACTGATTACAATTCTGTCCTGGGTGTCTTTTTGGATCAACTATGATGCATCTGCAGCCAGAGTCGCACTAGGTAATACA chr4 - 94230402 48912237 48912236 48912424 45317979 45317978 45318166 188 TGAATATTTATTCTTTGTTATAAAA---AGGAAAGTTTACATGTATTGAAGTCCGATTTCACCTCGAGAGACAGATGGGTTACTATCTCATCCAGATGTACATACCAAGTCTTTTGATAGTCATTCTCTCCTGGGTGTCATTTTGGATCAATATGGATGCAGCTCCAGCCAGAGTGGCTTTAGGCATAACA ...x..:..:.::......x:xx..---....:x..x.x..:.xx.xxx.x.xx.x....::..x:.....x.x..x.......x:x.:x.x..:.:x.....:..xxx.x:x:....x::x.....x...........x...........:xxx......x..x..........x..x:....:.xx... 25M3D163M 123/188 65.4% 188/94230402 0.0% 3/188 1.6% -1508708 -92721694 +9299 chr4 + 190214555 47403556 47403555 47403725 170 CAGGAGCGTATCCACGACTGTCACTAAGTTTTCGTCTAAAGAGAAACATTGGTTACTTCATTTTGCAAACCTACATGCCTTCTACACTGATTACAATTCTGTCCTGGGTGTCTTTTTGGATCAACTATGATGCATCTGCAGCCAGAGTCGCACTAGGTA-ATACATTCTCA chr4 - 94230402 83489598 83489597 83489768 10740635 10740634 10740805 171 CAGGTTCATACCTGCGCTTATCTTTGAGTTTCCGAATTAAGAGGAACATTGGTTACTTCATCCTGCAGACTTACATGCCATCTATCCTCATCACCATTCTGTCCTGGGTGTCTTTTTGGATCAATTACGATGCTTCTGCTGCACGAGTGGCACTGGGTAGGTACCTTTCCA ....xx.:..:.::..x:.:..x:.:.....:..xx.x.....:.................::....:..:........x....:x..x..:..x.............................:..:.....x.....x..xx....x.....:....-:...x..::.. 159M1I11M 131/170 77.1% 171/94230402 0.0% 1/170 0.6% -36086042 -58144360 +4281 chr4 + 190214555 47406651 47406650 47406726 76 TTCAGCTAAGTGTTGTCTTTCTCTTTCACAGGAATCACGACAGTGCTTACAATGACAACCATCAGCACCCACCTCA chr4 - 94230402 25515090 25515089 25515165 68715238 68715237 68715313 76 TTCCACCAATATCTGCTTCTTTCTTTTGCAGGAATCACAACTGTGCTGACCATGACCACCATCAGCACCCACCTCA ...x:.:..xxx:..::.:.:.....::..........:..x.....x..x.....x................... 76M 58/76 76.3% 76/94230402 0.0% 0/76 0.0% 21891561 NA +11459 chr4 + 190214555 47406667 47406666 47406905 239 CTTTCTCTTTCACAGGAATCACGACAGTGCTTACAATGACAACCATCAGCACCCACCTCAGGGAGACCCTGCCAAAGATCCCTTATGTCAAAGCGATTGATATTTATCTGATGGGTTGCTTTGTGTTTGTGTTCCTGGCTCTGCTGGAGTATGCCTTTGTAAATTACATCTTCTTTGGGAAAGGCCCTCAG-----------AAAAAGGGAGCTAGCAAACAAGACCA-----GAGTGCCAATGAGAAGAATAAA chr4 - 94230402 83492418 83492417 83492671 10737732 10737731 10737985 254 CCCTCTCCTT-ACAGGGGTCACCACGGTACTCACAATGACTACCATCAACACTCATCTGCGGGAAACTCTCCCTAAGATCCCTTACGTCAAGGCTATTGATGTTTACCTCATGGGCTGCTTTGTCTTTGTGTTCCTGGCACTCCTGGAATATGCTTTCGTCAACTACATATTCTTTGGACGAGGCCCCCGGCAGCAGAAGAAACAGAGTGAACGGATCAGCAAGGCCAACAATGAACGCCATCGTTATGAAGAAA .::....:..-.....::....x..:..:..:........x.......:...:..:..xx....:..:..x..x...........:.....:..x......:....:..x.....:........x..............x..x.....:.....:..:..x..:.....x........:x:......:.:.-----------.x.:..x..:.x:::x.:....:...-----..::....x:.xx.x...x... 10M1D180M11I26M5I22M 179/238 75.2% 254/94230402 0.0% 17/238 7.1% -36085751 -58144651 +3245 chr4 + 190214555 47420917 47420916 47420980 64 TGCATGAGCATGTACATACACACACAAACACACACACACACACACACACACACACACACACAGA chr4 - 94230402 8395801 8395800 8395864 85834539 85834538 85834602 64 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA .....:.:......:x....:.:::.x:.x:...:xx.:.................x.....:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 39025116 NA +14070 chr4 + 190214555 47425671 47425670 47426126 456 CAGGTCGACGCCCACGGTAACATTCTCCTCAGCACCCTGGAAATCCGGAATGAGACGAGTGGCTCGGAAGTGCTCACGAGCGTGAGCGACCCCAAGGCCACCATGTACTCCTATGACAGCGCCAGCATCCAGTACCGCAAGCCCCTGAGCAGCCGCGAGGCCTA---CGGGCGCGCCCTGGACCGGCACGGGGTACCCAGCAAGGGGCGCATCCGCAGGCGTGCCTCCCAGCTCAAAGTCAAGATCCCCGACTTGACTGATGTGAATTCCATAGACAAGTGGTCCCGAATGTTTTTCCCCATCACCTTTTCTCTTTTTAATGTCGTCTATTGGCTTTACTATGTACACTGAGGTCTGTTCTAATGGTTCCATTTAGACTA-------------CTTTCCTCTTCTATT---GTTTT-TTAACCTTACAGGTCCCCAACAGCGATACTGCTGT-TTCTCGAGGTAAGAGATTCAGCCA chr4 - 94230402 25519713 25519712 25520187 68710216 68710215 68710690 475 CAGGTTGAGCCCCAGGGAAACATGCTGCTTAGCACACTGAACATAAGATATGATGTCAGCTGCTCAGATGTGTTCTTGAGCTGTCGTGATGCCCAAGGCTCCATGTACACATCTGATGGTGCCGGCCTGCAGCACAGAAGGGCCCCTTCTGGCAGGGCCCTCTATACCAGGAGCGCGCTGGACACGCACAGGCTTCATCAGAAAGGGCACTTGCAAAGGAGGGCATCCCAGATGAGAGTCAAGATACCGAACTTGACTGATGTCAATTTCATAGACAAGTGGTCCAGGATGGTCTTTTCCATCACATTTATTCTTTTCAATGTTGTTTACTGGCTGTATCATGTACACTTATGTATGCAATAATG--TTAATATACACTAACATATAGAGGCTTGTTTCTTTTCTGTCTCAGTTTTGTTAACTATGAAGATCTGCAGTAACCATAACGTGATATTTTCAAGGTAAGGTACCAACCCA .....:..xx....x..x.....x..x..:.....x...:.x..xx.:x....x::x..:x....:..x...:..x:....xxxx.:..:x..x.:.x.x........x.x.x...::.:...:..x.x...:..x.x.:.x...:xxx::..x.x.xxx:...---.:..x....x......xx....:..x.x.x:x:x..:....:.x.x.:x...x.x..x......x.x.:.........x..x:.............x....:................x.:...x.:..::.......x...x:......:.....:..:..:.....x..::.........x.x..x..:xx.....--.:x..x..x....-------------:x..:..:....:.:---.....-.....:x.:x..:..:x..::.:.x...x:.:x:.-..:..:.......:x.::x.x... 164M3I198M2D13M13I15M3I5M1I35M1I24M 305/454 67.2% 475/94230402 0.0% 23/454 5.1% 21905958 NA +10207 chr4 + 190214555 47425672 47425671 47426024 353 AGGTCGACGCCCACGGTAACATTCTCCTCAGCACCCTGGAAATCCGGAATGAGACGAGTGGCTCGGAAGTGCTCACGAGCGTGAGCGACCCC---AAGGCCACCATGTACTCCTATGACAGCGCCAGCATCCAGTACCGCAAGCCCCTGAGCAGCCGCGAGGCCTACGGGCGC------GCCCTGGACCGGCA---------------------CGGGGTACCCAG------CAAGGGGCGCATCCGCAGGCGTGCCTCCCAGCTCAAAGTCAAGATCCCCGACTTGACTGATGTGAATTCCATAGACAAGTGGTCCCGAATGTTTTTCCCCATCACCTTTTCTCTTTTTAATGTCGTCTATTGGCTTTACTATGTACACTGAGGTCTG chr4 - 94230402 83493225 83493224 83493610 10736793 10736792 10737178 386 AGGTTGACCCTTACGGTAACATCCTCCTCAGCACTCTGGATATGAACAACGAGCTGCTGGCCACGGACATGATGAGCAGTGTTGGCGACTCTCGAAACTCTGTCATG---TCCTTTGAAGGCTCAGGAATTCAGTTCCGCAAGCCACTGGCCTCCCGGGATGGATTTGGTCACCACCCAACCCTGGACCGCCATGTCCCACTGACCCACCATGCCGCAGCCCGCAACCGTGCCAACTGCCGTCTCCGTCGGCGGTCATCTAAGCTGAAGCTCAAAATCCCAGACCTAACAGATGTCAGCACCATTGACAAGTGGTCAAGAATCATTTTTCCTATCACCTTTGGATTCTTCAACCTTGTTTACTGGTTGTACTATGTAAATTGATGCCTG ....:...x.::..........:...........:.....x..xx:x..:...x:.xxx.x.x....x:..x.x.xx..:..x:.....:.:---..xx.:::....---....x...x:..x.x:.x..:....x.........x...:x.xx...x..x.xx.x:..x.:.------:..........x..---------------------..x:.:x.x..:------...xx.x..:x....:x....xx.x..:x....x..:x....:.....x...:.:..x.....x.::x....x...........xx....xx....:..:.........xxx:.:..:..:x.:..:..:...:.x.........x.:...x.:... 92M3I12M3D63M6I14M21I12M6I157M 237/350 67.7% 386/94230402 0.0% 39/350 11.1% -36067553 -58162849 +3309 chr4 + 190214555 47430939 47430938 47431000 62 AATGAGACTCTGTCTCTTTAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAAGAAAAAAA chr4 - 94230402 76845937 76845936 76845998 17384405 17384404 17384466 62 AATCATAGTCCGTTTCTTCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAA ...x.x.x..:..:....:x.x............:.:...............:.xx..x... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% -29414998 -64815404 +3271 chr4 + 190214555 47430958 47430957 47430998 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAAGAAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ..................................x:.x... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% -40245389 -53985013 +3018 chr4 + 190214555 47430960 47430959 47431000 41 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAAGAAAAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA .............:.................:.:x..x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -40245387 -53985015 +3262 chr4 + 190214555 47431679 47431678 47431738 60 TTGTTTGTTTGGGTGTTTTGTTTGGTTAGTTGGTTTTGTTTTGTTTTTTTCTAATTAAAA chr4 - 94230402 7612775 7612774 7612834 86617569 86617568 86617628 60 TTGTTTTCCTCTGTTTTTGGTTTATTTGGTTGTTTTTGTTTTTCTTTTTTCTAATTAAAA ......x::.xx..x...x....:x..:....x.........x:................ 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 39818904 NA +3030 chr4 + 190214555 47436542 47436541 47436584 43 GAGACACTGCCTAAATAAAGGAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 31741127 31741126 31741169 62489234 62489233 62489276 43 GAGATACTGCTTAAGAGAAGGAAAAAAAAAAAAAAAAAAAGGA ....:.....:...:x:.......................::. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 15695415 NA +3220 chr4 + 190214555 47441240 47441239 47441306 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCACATACAACTA chr4 - 94230402 54229013 54229012 54229079 40001324 40001323 40001390 67 AAAAAAACAAACAAACAAAAAAAAACAAAAAGCAAGAAACAACCGAAGTTGAACCCACGTACAACTA .......x...x...x.........x.....:x..:...x..xx:..:xx:..:....:........ 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% -6787773 -87442629 +9167 chr4 + 190214555 47452987 47452986 47453216 230 ACTCCAACGCAAACAAAAAAAAAC------CCCAAAACCTTAAACATTCAAATCATATGACAAAATTATAGCAAATACCTTATTCGCTGCTTCCAAGGACTGTATTAGATTCTGCAGCTCCTCTCTACTCATTTCAATAGAATAAGGTTTTACTTCACCATTTTCTTTTACATCTAGATGCAGGCTTAAAAGTGGCATTCGTAATGCAGCAATCTTGTCACTGGAAAGTGCAAGCT chr4 - 94230402 25527110 25527109 25527340 68703063 68703062 68703293 231 ATTCCAGCTTAAAAAAAAAAAAGCATAATGCACAAGAACTCAGAGAAGGAAAA---ATGATGTCATTAAA--AGCTACCTTATTAGCAGCTTCCAGAGCATTTATTAGGTTCTGCAGCTCTTCCTTGTTCATTTCTATAGAAATCGGTTTAATTTCACCATTTTCTCTCACATCCAAATCAAGATTCAGAAGTGGCATTTGCAGCATGGAGATCTTATCACTGGACAGAGCAAGCT .:....:.x:...x........:.------.x...:.x..:.:.x.xxx...x---....::xx....x.--.:x.........x..x.......::.xx.x......:...........:..::.::.......x......xxx.....x.:.............:.:.....:.:..xx..::.:.:..........:.:.:::::.x:.....:........x..x....... 24M6I23M3D14M2D164M 161/225 71.6% 231/94230402 0.0% 11/225 4.9% 21925877 NA +7890 chr4 + 190214555 47456570 47456569 47456777 208 CTCTTACCTTTACCTGCCAATCAAAATCCTGTAGCTGTGCAGAGGAAATAGCAACTATTTCTCTTGACAGAGCCTGTTTGATTTCATCTTTCCTACTTTTCACGCATTTCATGATAGTTTCTTGATGAAGTGAATTCAACTGATTCAACTGCTGAAATATCTATAAAAATAAAAACAGGCAAAAGGGGCTTTCTGTTTAAAATGTAAA chr4 - 94230402 25528018 25528017 25528217 68702186 68702185 68702385 200 CTCTTACCTTTAATTGCCAGTCAAAATCCTGCAGCTGGGCAGACGAGATCGCATTTACTGTTTCTACAAGTGCATTTCTGATTTCTTCCTTTCTGGCTTTTAGACATTTTATGATTGCTTCTTGATAGTTTGCATTCAACTCGTTCATCTGCTGAACAGCCTGTAAGGTTA--------TTAAAGGTTATGACTGCTTAAATTACAAA ............x:.....:...........:.....x.....x..:..x...x:..:.x:.::.:xx..x..x.x.:.......x..:..:..:x:...:.x:.....:.....x.:........::xx..x........x:....x........xx::..:...::x..--------:x.....xxx.xx...:.....x.::... 171M8D29M 139/200 69.5% 200/94230402 0.0% 8/200 4.0% 21928552 NA +3124 chr4 + 190214555 47479627 47479626 47479673 47 TTTTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTTTGAGA chr4 - 94230402 32236566 32236565 32236612 61993791 61993790 61993837 47 TTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTCTTTCTGAAA .....x...................:..:..x....x:...:...:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 15243061 NA +7962 chr4 + 190214555 47512487 47512486 47512919 433 TTTTGTTTGTTTGCCAGGTCAGCTACACAACCTGGATCTTACCACAGTTTGGAT---ATGACTGAGGCTCTCCAATGGGCCAGATATCACTGGCGACGGCTGAT-----CAGAGGTGCAACCAGGGATGATGATTCAG----GGCCATACAACTATTCCTCGTTGCTCGCCTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTCAGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTCCGGAGCCTATGTGAACAATCGAATACGAACAACAAAGTACACACTTCTGAATTTTGTGCCAAGAAATTTATTTGAACAATTTCACAGGTA-----------CTGTTTTATTTTTGAAGAAAACCTTAGAAT---ATCATTCTAGTTGATATATAACATATTTTTCATTTTCATAACCCTGTATATTACTT chr4 - 94230402 25549078 25549077 25549504 68680899 68680898 68681325 427 TTTTGACTTCTCTCTAGATAGAGGACACTCCTTGGATTATAAAGCTCGTGGGATGCAATGGCAGATCCCATCCACTGGACCCGGTATCGTTGGCGGCAACTGATGTCTACAGAAGG-----CAGAGAAGGCGG--CAGCAGCAGCAACTCAAGTA-----------------------ACAAGTGCCATCAAGCAACAAAAACTATTGGCAAACATAGGATAGTGATACCCTGCTTGGGGCGTTTTAAGGAAGAGTATGAAAAGGTATCAAAACTGTATATGAACAACAAAATACGGACTACTAAATACACTTTACTGACTTTTATACCACGCAATTTATTTGAACAATTTCACAGGTAATTAACTATTTTTGTTTTGTTTGTGAAAATTCTTCTAAAGTAGAATCTTTTTATTTAAT-TGTGTATTAATATGTATTTTTCCAA-CCTGCCTATCACTT .....x:.x:.:x.:..:.x::xx....xx.:.....:x..xx:.xxx.x....---...:.x..xx.:x....x...:..x.:....::.....:.::.....-----....:.x-----...:..x.::.:--...----:..x.:x...x..-----------------------:.....x.:x...::.xx.x...x:xx:x..x.::..:x....x..x:.x...::.x.xx:..x:..:.....x........:...x.x..x::.x:x...:.......:x:......:..x..x..:.....x:.x....x....:.:...x.x..........................-----------:......:...x....:.xxx:::..:.:.---...x..:..x..:..-.:.:xxx..x.x.x:.....:x:..-....:x...:.... 54M3I47M5I7M5D12M2D3M4I13M23D181M11I30M3I15M1D25M1D14M 259/401 64.6% 427/94230402 0.0% 58/401 14.5% 21963409 NA +12367 chr4 + 190214555 47515460 47515459 47515675 216 TGTGTTTG-----GGTTGCAGAGCTGCCAATTTATATTTCCTGTTCCTAGTTGTCCTGAACTGGGTACCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGTTGCCTCTGGTGGTGGTCCTTACAATTATCGCAATTAAAGATGGCCTGGAAGATTATCGGAAATACAAAATTGACAAACAGATCAATAATTTAATAACTAAAGTTTATAGTAGGTAAG chr4 - 94230402 25550078 25550077 25550298 68680105 68680104 68680325 221 TGTGTTTGCTCTTTGTTTCAGAGTTGCCAATTTGTATTTCCTATTTCTAGTTGTTTTAAACTGGGTTCCTCTGGTGGAAGCTTTCCAGAAAGAAATTACAATGCTACCTCTGATAGCAGTTTTGACAATAACTGCCCTGAAGGATGGTCTGGAAGACTACTCAAAATACAAAATGGATAAACAGATAAACAACTTACTAACCAAAGTGTATAGCCGGTAAG ........-----x...x.....:.........:........:..:........::.:........x...:....:.....:.....:..:.....:..x...:.:......:.:.::..::.x.....x.::..xx.x..:.....:........:..::x:...........x..:........x..:..:...x....:.....x.....:x...... 8M5I208M 167/216 77.3% 221/94230402 0.0% 5/216 2.3% 21965382 NA +13627 chr4 + 190214555 47522964 47522963 47523246 283 TTTTTCACTTGATATTCTTTTTTTTTTTTAACTTTTTTTTA---ATTACAGGAAAGAGAAAAAATACATTGACCGATGCTGGAAAGACGTTACTGTTGGGGACTTTATTCGCCTCTCCTGCAACGAGGTCATCCCTGCAGACATGGTACTACTCTTTTCCACTGATCCAGATGGAATCTGTCACATTGAGACTTCTGGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATATGCAGAACAGGTAAGTCATATGTTCTCAGTTAGTGGCTTA chr4 - 94230402 25554230 25554229 25554511 68675892 68675891 68676173 282 TTTTTCATTT--CTTTTTTTGTTTGTTGTAATGTTTTTATATCCATTTCAGGAAAGAGAAGAAATACATAGATGAACACTGGAAAAATGTCAATGTTGGAGACTTCATCCGGCTTTCATGTAATGAAATTATTCCTGCTGACATGGTGCTGTTGTATTCTAGTGACCTGGATGGGATCTGTTACATTGAAACTGCAGGTCTTGATGGAGAAACCAATCTAAAGCAGAGGCAGGTGGTGAGAGGATATTCAGAGCAGGTGA--TAATTGTGCATTTCTAGTGGTTTA .......:..--:x..:...x...x..x...:x.....x..---...x............:........x..:x:.::.......:.:..:.x......:.....:..:..x..:..x..:..:..::.:..:.....x........:..::.x.x...:.x...:.::.....:......:.......:...x.x..............:.x....:....:..............xx.:......x....:.....:.--:.xx...x.x:xx:......:... 10M2D29M3I216M2D24M 209/279 74.9% 282/94230402 0.0% 7/279 2.5% 21968734 NA +6199 chr4 + 190214555 47525526 47525525 47525650 125 TCTTATTTTGTGATTCAAAAAATATTTTTAGGACTCTGAAGTTGATCCTGAGAAGTTTTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGAGGCTTCCTGTGAGTAA chr4 - 94230402 25556656 25556655 25556780 68673623 68673622 68673747 125 tcttttttttttttttttttAATTACTTCAGGCCTCTGAAATTGATCCAGAAAAATTTTCTGGTAGAATAGAATGTGAAAGTCCTAACGATGACCTCAATCACTTTCGAGGCTTTGTGTAAGTAA ....x....x.xx..:xxxx...xx:..:...x.......:.......x..:..:.....::....:..............:..x...:.........::x:x..:........:x...:..... 125M 92/125 73.6% 125/94230402 0.0% 0/125 0.0% 21968870 NA +3289 chr4 + 190214555 47528490 47528489 47528555 66 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACACCACATTGTCTTTAATCATCCA chr4 - 94230402 44746772 44746771 44746837 49483566 49483565 49483631 66 TACGCGTGCGTGTGTGTGTGCATGTATTTATAAACACATACACACTTTACTGTTTATCATCTTTCA .::.:...:...........::.....x....x.:.:........:x:.:...:.x.x...x.:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 2781718 NA +3250 chr4 + 190214555 47528492 47528491 47528547 56 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACACACCACATTGTCTTTA chr4 - 94230402 89821282 89821281 89821336 4409067 4409066 4409121 55 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA-GCCTCAATCTCTTTA .........x.x.........:.............:....-:..x..x.x...... 40M1D15M 47/55 85.5% 55/94230402 0.0% 1/55 1.8% -42292790 -51937612 +3221 chr4 + 190214555 47530364 47530363 47530497 134 GATATTGGTTTTTATCGAGTGTTTTTTCTACATCTA---TTGAAATGATTATGTGGGTTTTTGTTGTTGTTGCTGTTGTTG--TTCTTTTTGTTTGTTTGTTTGTTTGT--------TTGTTTTTCGAGACAGTCTCACTCTATTTC chr4 - 94230402 75881579 75881578 75881722 18348681 18348680 18348824 144 GATATTTCTTTCTCT-GAAAGATTGCTCTACTTTTAGGATAGACACG--TGTGTGGGTTTTTGTTGTTGTTGTTATTGTTGGTTTTTTTTTAATAACACGTTCATTTGTAGGGAGAATTGAATTCCTTTATAGTTTCAATCAGTTCC ......xx...:.x.-..:x.x..x:.....x.:..---.x..x.:.--.:.....................:.:......--..:.....:x.x::x:...::.....--------...xx..:.xxx.:...:...x..x:..:. 15M1D20M3I8M2D32M2I26M8I30M 92/131 70.2% 144/94230402 0.0% 16/131 12.2% -28351215 -65879187 +3045 chr4 + 190214555 47530412 47530411 47530475 64 TGTGGGTTTTTGTTGTTGTTGCTGTTGTTGTTCTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 13036419 13036418 13036482 81193921 81193920 81193984 64 TATGGGTTCCTATTGATTATGCCATCGTTTTGCTTTTTGTCTGCTTGCTTTTTTTTTTTTTTTT .:......::.:...x.xx...::.:...x.x........:..:...:..x...x...x..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 34493993 NA +3121 chr4 + 190214555 47530418 47530417 47530462 45 TTTTTGTTGTTGTTGCTGTTGTTGTTCTTTTTGTTTGTTTGTTTG chr4 - 94230402 44858319 44858318 44858363 49372040 49372039 49372084 45 TTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTTG ............:.........xx.x:.............x.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 2672099 NA +7167 chr4 + 190214555 47535482 47535481 47535621 140 TGAATTTATATGCTGTCTTTCTTATAGAGAACATTCCAACAAAGAACGCGTGGGTCTCAGTAAAGAAAATTTGTTGCTTAGAGGATGCACCATTAGAAACACAGAGGCTGTTGTGGGCATTGTGGTTTATGCAGGTCGGT chr4 - 94230402 25557829 25557828 25557964 68672439 68672438 68672574 136 TGAGTTTTTGT----TTTTTTTTCCAGTGAGAATTCAAGCAAGGATCGAGTGGGCCTCAGCAAGGAGAACTTATTGCTGCGAGGATGCACAGTAAGAAATACAGAAGCTGTTGTAGGCATTGTGGTATACGCAGGTTAGT ...:...x.:.----.:...:..x:..x..:x....x.:...:..x..x.....:.....:..:..:..:..:.....xx..........x:.x.....:.....:........:...........x..:......::.. 11M4D125M 103/136 75.7% 136/94230402 0.0% 4/136 2.9% 21977653 NA +8306 chr4 + 190214555 47535891 47535890 47536039 149 ATCCTTCATAGGCCATGAAACCAAAGCAATGCTGAACAACAGTGGGCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAGCAAACACAGATGTCCTCTGGTGTGTCATGCTTCTGGTCATAATGTGCTTAACTGGCGCAGTAGGTAGGT chr4 - 94230402 25558634 25558633 25558782 68671621 68671620 68671769 149 ACCTTTGTCAGGTCATGAAACAAAAGCCATGCTGAATAACAGTGGACCTCATTACAAGCGCAGTAAATTGGAAAGAAAAGTGAATTCTGATATACTTTGGTGTGTTCTGCTTCTAATTTTAATGTGTTTAACAGGTGCAATTGGTAAGT .:.:..xx:...:........x.....x........:........:..x.:x..:........:.....:.......:..::..:x.x...:.x..:........:x.......::.:x.......:.....x..:...:.x....:.. 149M 112/149 75.2% 149/94230402 0.0% 0/149 0.0% 21977257 NA +20602 chr4 + 190214555 47536424 47536423 47536953 530 TATTTTTTGAAAGGTCATGGAATCTGGCTGAGCAGGTATGAAAAGATGCATTTTTTCAATGTTCCCGAGCCTGATGGACATATCATATCACCACTGTTGGCAGGATTTTATATGTTTTGGACCATGATCATTTTGTTACAGGTAATTTTTTATCAAGCTTATGGTAGAATTTTAACAT-------------------CTTTGCTGCTT-----ATCCAGCTATGTTCAGT---TTCACATCCTTTTTTAACCTACGTTAACATTTTAAAACTTGTTTGGATCTTCT------------TAGGTCTTGATTCCTATTTCTCTCTATGTTTCCATCGAAATTGTGAAGCTTGGACAAATATATTTCATTCAAAGTGATGTGGATTTCTACAATGAAAAAATGGATTCTATTGTTCAGTGCCGAGCCCTGAACATCGCCGAGGATCTGGGACAGATTCAGTACCTCTTTTCCGATAAGACAGGAACCCTCACTGAGAATAAGATGGTTTTTCGAAGATGTAGTGTGGCAGGATTTGATTACTGCCATGAAGAAAATGGTGAG-TGTTGGATTT chr4 - 94230402 25559670 25559669 25560222 68670181 68670180 68670733 553 TATTTTCT---AGGCCATGGAATTTGGATAAGTAGATATTCGGAAATAGCTTTTTTTAACATCCCTGAGCCAGATGGGAAATCGATTTCTTCTATGTTAGCAGGGTTCAATATGTTCTGGACAATGATCATTTTATTACAGGTAACTTT-------------GGTCTGCTTTGAGCATGAGCCATATCCTGATCTCACTTAGGTCCTTGAAGTAACCCTTTGGTTTCAGAAGAGTTACTTCATGTTTGCACATAGCTGAAGAATTTGGT-CTTATTTAATCCTTGTGTTTTGTTTCAATAGGTCTTGATCCCTATTTCTCTCTATGTTTCAATTGAAATTGTCAAACTGGGACAAATTTATTTAATACAGAATGACATTGATTTTTACCATGAGAAAACAGACTCTACAATTCGGTGTCGAGCATTGAATATTGCTGAAGACCTTGGCCAGATTCAGTATATCTTCTCAGACAAGACTGGAACACTCACTGAAAATAAGATGGTTTTTCGGAGATGCAGCATTGCAGGACAGGAATATTGCCACGAAGAAAATGGTAAGATGCTAAATCT ......:.---...:........:...x.:..:..:...xx::.:..:xx......:..::.:..:.....x.....:x.xx:x..x..x:.xx....:.....:..:x.......:.....x...........:..........:...-------------...xx:x...x.:...-------------------...x.x.x...-----.x..xx:.:xx.....x---x.:..x..x.x...xx..x..xx.x..x.x...::x-...:...::x:...x.------------...........:....................x..:........x..:..x........x.....x..x..:.:...::.x.....:...x....:....::..:....:x:...:...:.....x:....:..:..:..:..:..x..x...........:x....:..x..:.....x.....x........:.................:.....:..::.x......:xx..x..:.....:............:..-..:.::..:. 8M3D138M13D16M19I11M5I17M3I36M1D16M12I261M1I10M 376/513 73.3% 553/94230402 0.0% 57/513 11.1% 21976754 NA +7115 chr4 + 190214555 47546603 47546602 47546940 338 AGTGTGCTTTTTATCCCAC-AGCCAGGAGGTTGGAGTCCTATCAGGAAGCTGTCTCTGAAGATGAAGATTTTATAGACACAGTCAGTGGTTCCCTCAGCAATATGGCAAAACCGAGAGCCCCCAGCTGCAGGACAGTTCATAATGGGCCTTTGGGAAATAAGCCCTCAAATCATCTTGCTGGGAGCTCTTTTACTCTAGGAAGTGGAGAAGGAGCCAGTGAAGTGCCTCATTCCAGACAGGCTGCTTTCAGTAGCCCCATTGTAAGTATGAATGCATGACTAGAGTCTTGCACATCCACAATGTATGATGAGAGAACAGCCTTGTA----------ATTATGATAGAGT chr4 - 94230402 25562482 25562481 25562815 68667588 68667587 68667921 334 AATTTTCTTTCTATTTCTTTAGCAAAAAGGTTGGAATCCTATCAAGAGAGGGATTTGAAAGATGAGGATT---------CAGC---TGACTCTTTGGGCCACATGTCAAAATGGAGCAGACACGACTGTGG---AGCTGAGAATGAATCTTTGAACAGAAAGTCTTCAAATCTGTTATCTGGTAGTTACTCTGCATTAGGAAGGGAACGTTCATCAAGTGATGCTCCCTGCTCAGGACATGTTGCTTTCAGCAGCCGCATTGTAAGTAAAAGTTGTTAGTTTTGATACTGAATTTTTGAAGTAACTCATGAAGGAACATCTTTTTACTCTACTTTTATTTTAATAGAGT .:.x.x....:...::.x:-...x.::........:........:..::xx.x:.:x:.......:....---------...:---..::..::.x:..x.:...x.....:x...x:xx.x.::...::.---..:.x.x....:::.....::x.:x...:.:.......xx:.xx....x..:.x:.:.:.x:.......x.:.x:xxx.x.x.....x.:x..::::..x:....x.:.........:....x...........x:.:.xxx.:::.xx::.x:..x.:x.:::x.:.:xx.x....::.....x.:..x..----------...x.:....... 19M1I50M9D4M3D45M3D192M10I13M 197/323 61.0% 334/94230402 0.0% 26/323 8.0% 21984121 NA +7217 chr4 + 190214555 47554681 47554680 47554924 244 TTTATATACTTCTTATAACAACACACTGTCTTATTGG----ATCTTCAGGAAACAGACGTGGTACCAGACACCAGGCTTTTAGACAAATTTAGTCAGATTACACCTCGGCTCTTTATGCCACTAGATGAGACCATCCAAAATCCACCAATGGAAACTTTGTACATTATCGACTTTTTCATTGCATTGGCAATTTGCAACACAGTAGTGGTTTCTGCTCCTAACCAACCCCGACAAAAGGTGAGTAAGT chr4 - 94230402 25563300 25563299 25563547 68666856 68666855 68667103 248 TTTCCATAGTTTATATCCTAATTCACAGCTTTGTTTGTTTAATCCATAGGAAACAGATGTTGTACCAGATACACAACTGCTGGAGAAATTTAGACATATTTCTTCTCTTTCCTATCAAGAATCGGAAGACGTTATCAGCAAGTTAGCTTTGGAGACAATGTACATCACTGACTTCTTTCTCGCCCTGGCAATCTGTAATACTGTTGTTGTTTCAATCCCCAATCAGCCACGTCAAAAGGTAAGAAGGT ...x:...x..:x...xx:..:x...x.::..:..x.----...:x:..........:..x........:..xx::..x:.:..x........x..x...x.x:...xx::..x.xx:xx.:::..x..x:::...x:x..x::.x.xx....:..xx.......:.::.....:..:x.:..x:.......:..:..:..x..x..x.....x:::..:..:..:..x..x........:..x.:.. 37M4I207M 153/244 62.7% 248/94230402 0.0% 4/244 1.6% 21991381 NA +21050 chr4 + 190214555 47557654 47557653 47558287 634 TCTTTCATAGATCAGACACCCTTCACTGGGGGGGTTGCCCATTAAGTCTTTGGAAGAGATTAAAAGTCTTTTCCAGAGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGGGAAAGAGCCATCTTCTGGAGTTCCAAACGCCTTTGTGAGCAGACTCCCTCTCTTTAGTCGAATGAAACCAGCTTCACCTGTGGAGGAAGAGG-TCTCCCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAG-------CTTGCTGCACAGAAACAGAGAAACAACACGGTGA-------TGCAGGCCTCCTGAATGGCAAGGCAGAGTCCCTCCCTGGACAGCCATTGGCCTGCAACCTGTGTTATGAGGCCGAGAGCCCAGACGAAGCGGCCTTAGTGTATGCCGCCAGGGCTTACCAATGCACTTTACGGTCTCGGACACCAGAGCAGGTCATGGTGGACTTTGCTGCTTTGGGACCATTAACATTTCAACTCCTACACATCCTGCCCTTTGACTCAGTAAGAAAAAGAATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGTATACGAAAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGGTGGCTTCCCCAGGTAAGTTTATACAA chr4 - 94230402 25565319 25565318 25565956 68664447 68664446 68665084 638 TCTGTTCCAGATGAGACGCTCTTCGCTGGGAAGAATGCCTATTAAATCCCTTGAGGAAATCAGGCAGATGTTCCAGAGGTTGTCAGTCCGTAGGCTAAGTTCCTCCCCACTTCCAAGCATAAAAGAGTCATCATCTGAAAACCCAAGTAGTTTTGTGAGCAAACTGTCTATTTTCAA---AATGAAACTGGCTTCACCTGCTTTGGATGGGGCTGTTCAAAGTGC-TGCTCGGCCTCACAATCCTGACAGCCCAGAAAATCCCCAGTTACCCGAAGA-----AAGTTATACGGTGAATGTAACTGCTGGCCATGAAACCCACAGTGCTGAGTCACCTATTGAATGGTCTCCCTTACCTAAGCTTTGTTATGAAGCTGAAAGTCCAGATGAAGCTGCTTTGGTCCATGCTGCTAAAGCTTATAAATGTATTTTACAGTCTAGGACTCCTGATCAAGTAACTGTGGATTTCTCAGGATTGGGATCTTTAACATTTCAGCTTTTGCATATCCTGCCTTTTGACTCAGTGCGAAAAAGGATGTCAGTGGTGGTTCGGCATCCAGTCTCCAACCAAGTGGTGGTGTACACAAAAGGTGCAGACTCAGTCATGATGGATTTGTTGGAAACTGCATCTGAAGGTA--TTTGTAGAA ...x.:x:....x....:.:....:.....::.:x....:.....:..::.x..:..:..:.::x:xx.x........:.x...x.....x..:::......::.x:.:...xxx..::x:......:....x....:.:x:....:::x:..........:...x:..x.:..:.:---........::..........:xxx...x.:..-.x.:.x.:...:-..xxx.x..:..xx:::.::::...:...-------.:x.:.:.x.::.:.-----..::x.:.......-------...x....x:xx:.x:x:..:x..x.....x.::x:..:.::.:.x::xx:x:x:..x..x........:..:..:..:.....:.....x..:..:..x:....:..:.::.....:x....:.:.....:....x....x..x..x..:..x.:x.....:..:x.x.xx......:.x...........:..::.:..:........:...........:x.......:.....x..x.....:..:..:..xx.:.....:.....x........:..:.....:..x..:..x..x..x.....x..::..xx:::x..x..:xx.....--...:..x.. 177M3D32M1I12M1D29M7I15M5D14M7I335M2D9M 408/623 65.5% 638/94230402 0.0% 26/623 4.2% 21992335 NA +5047 chr4 + 190214555 47558931 47558930 47559032 102 AGTCTGGAGAAACAACAGATGATAGTAAGGGAGAAAACCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTATGTATAGCAAAGAAGGTG chr4 - 94230402 25567315 25567314 25567416 68662987 68662986 68663088 102 AATTCAGAAATGCAACAGAAGAATATTAAAGAGAGGACCCAGAAGCATCTGGATGACTATGCCAGAAAGGGACTGCGCACTCTTTGTATTGCTAAAAAGGTG .:.:::..:.x:.......x..xx:.x.::....::...........::...............:.x.:..x..x..:...:.x.....x..x..:...... 102M 73/102 71.6% 102/94230402 0.0% 0/102 0.0% 21991616 NA +3023 chr4 + 190214555 47560488 47560487 47560526 39 AAAAACAAAAACAAAACAAAACAAACAAACAAAAAAAAC chr4 - 94230402 50118709 50118708 50118747 44111656 44111655 44111694 39 AAAAACAGAAACAAAGCAAATTAAACAAACAAAAAAAAC .......:.......:....x:................. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -2558221 -91672181 +3038 chr4 + 190214555 47560489 47560488 47560538 50 AAAACAAAAACAAAACAAAACAAACAAACAAAAAAAACATCAAAAGGTAT chr4 - 94230402 88287908 88287907 88287957 5942446 5942445 5942495 50 AAAACAAAAACAAAACAAAACAACAACAACAAAAAAACATCTTAAGATAT .......................xx.x.xx...........xx...:... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% -40727419 -53502983 +3081 chr4 + 190214555 47560489 47560488 47560550 62 AAAACAAAAACAAAACAAAACAAACAAACAAAAAAAACATCAAAAGGTATGAAAGGTGCTGC chr4 - 94230402 24629529 24629528 24629585 69600818 69600817 69600874 57 AAAAAAAAAACCAAACGGAACAAACAAACAAAAAAAACACAAA-----ATCAGAGGTTTTGC ....x......x....::.....................:x..-----..x.:....x:... 43M5D14M 47/57 82.5% 57/94230402 0.0% 5/57 8.8% 22930960 NA +3040 chr4 + 190214555 47560494 47560493 47560533 40 AAAAACAAAACAAAACAAACAAACAAAAAAAACATCAAAA chr4 - 94230402 15215973 15215972 15216012 79014391 79014390 79014430 40 AAAAACAAAACAAAACAAGCAAACAAAAAAAAACCCAAAA ..................:.............xx:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 32344521 NA +9666 chr4 + 190214555 47560926 47560925 47561083 158 CTCTCTTTTAATTCTTCCCGTAGGTCATGAGTGACACTGAATATGCAGAGTGGCTGAGGAATCATTTTTTAGCTGAAACCAGCATTGACAACAGGGAAGAATTACTACTTGAATCTGCCATGAGGTTGGAGAACAAACTTACATTACTTGGTAGGTGA chr4 - 94230402 25568250 25568249 25568407 68661996 68661995 68662153 158 CTGTGTTTTCTTTCCCTCTATAGGTCATGAGTGATGAAGAATATACAGAGTGGTTAAATAATCATTTTTTAGCAGAAACCAGCATTGACAACAGGGAAGAGTTGCTGCTGGAATCTGCCATCAGGCTTGAAACCAAACTAACTTTGCTTGGTAGGTAA ..x.x....xx...:::.::..............::xx......:........:.:.:x..............x..........................:..:..:..x...........x...:.x..:.x......x..x..:..........:. 158M 126/158 79.7% 158/94230402 0.0% 0/158 0.0% 21992676 NA +10904 chr4 + 190214555 47563576 47563575 47563801 226 TTTAGGTGCTACTGGCATTGAAGACCGTCTGCAGGAGGGAGTCCCTGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGACAGGGGACAAGCAGGAGACAGCTGTCAACATAGCTTATGCATGCAAACTACTGGAGCCAGATGACAAGCTTTTTATCCTCAATACCCAAAGTAAAGTGCGTATATTGAGATTAAATCTGTTCTTCTGTATT chr4 - 94230402 25569822 25569821 25570043 68660360 68660359 68660581 222 TTAAGGTGCCACTGGCATTGAAGATCGCCTGCAGGATGGTGTTCCAGACACAATACAGGCATTACGGAAAGCAGGAATAAAAATATGGATGCTGACAGGTGACAAGAGAGAGACAGCTGTCAACATTGCCTATGCTTGTAAATTGCTGGAGCCAGATGACAGAATCTTCACACTCAAATCGCAAAGTGGAGTGAGTAGA---AAATTGCA-CTTTTTTTCAGTGTT ..x......:..............:..:........x..x..:..x..xx.x...x.:..x:.x.:x.....:..x..x..:..x..............x......x::.................x..:.....x..:...:.:................::x.:..:.:x.....xx.x......::....x...x.---.:...:x.-..x..:...x..:.. 199M3D8M1D15M 168/222 75.7% 222/94230402 0.0% 4/222 1.8% 21993754 NA +3700 chr4 + 190214555 47563604 47563603 47563719 116 CTGCAGGAGGGAGTCCCTGAATCTATAGAAGCTCTTCACAAAGCGGGCATCAAGATCTGGATGCTGACAGGGGACAAGCAGGAGACAGCT--GTCAACATAGCTTATGCATGCAAACT chr4 - 94230402 89119497 89119496 89119612 5110791 5110790 5110906 116 CTGCAGGAACAGTCAGCAGAGACGATCGAAGCTCTGCATGCTGCTGGCATGAAGGTGTGGGTACTGACAGGGGACAAGATGGAGACTGCCAAGTCCACCTG--CTATGCCTGTAGGCT ........:x::x:xx.x..:x.x..x........x..::xx..x.....x...:.x...:.:...............xx......x..:--...x..x.:--:.....x..:.::.. 90M2I9M2D15M 78/114 68.4% 116/94230402 0.0% 4/114 3.5% -41555893 -52674509 +9938 chr4 + 190214555 47568820 47568819 47569241 422 TTGCCTCTTGTTTCAAGGATGCCTGTGGGATGCTGATGAGCACAATTTTGAAAGAACTTCAGAAGAAAACTCAAGCCCTGCCAGAGCAAGTGTCATTAAG----TGAAGATTTACTTCAGCCTCCTGTCCCCCGGGACTCAGGGTTAC-GAGCTGGACTCATTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGTCTGCTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGATGACCCTTGCTATTGGTGAGTGAGGATGAATCTGAGTCCTGCTCTTCTCCCTTTCAC-ACCACACCAGACACCGATCCTTCTGTCTCTTTCTTCTCCCACTGTTCCTTCCA chr4 - 94230402 25571698 25571697 25572106 68658297 68658296 68658705 409 TTTTCTCTTGTCTTTAGGATGCCTGTGCTTTGGTGATGAACAATATTTTAGAATGCATGCAGAAAAGCACTC----CTGACCAAAAAAAAGGAAATCAGAAACTTGAGAATGTCCCTGCAAGTCCTTCTACCCAAG-CTCACGGCTTCAGTGCAGGCCTGGTTATTGATGGAAGGACTTTAGAGCATGTCCTTCAGGACAGCCTGCAGAATGCTTTCTTGGAGCTCACAGAAAAATGTCGAGCTGTAGTCTGCTGCCAAGCCACACCACTGCAAAAGAGCGTGCTGGTCAGACTGGTGCGAAATAAGCTAAAGGCAATGACGTTAGCTGTAGGTGAGT--------------CTCATGGTTTCCTTCTTTTCTCTGAGATGTAGAAGGCAGTTTCTTCTCTCCTTTATTTTTCTCAGTGTCTGTTACA ..x:.......:.:x............xxx..x......:..xx.....::..x:xx.x.....:.:x....----.:x:...:.:x..:x.xx..:.::----...::..x.x.:.xx:xx....x::x...::.-....x..:.x.-.x..x..x..x:....::x...:.:...::.:...:x..:...x..:..x..:.....:..xxxx...:....:..x...xxxx::....:......:..........:.........:.....:..:..:.x:x....x.:.:....x..x.::x.x..xx...::.....x:.x...:.x.......--------------x..x..x.:.:..:.:....x.-:xx.:::x::.x:.x.x.:.....x..::..x:..:..:..x...::x..x.. 72M4D24M4I32M1D11M1I189M14D22M1I53M 253/403 62.8% 409/94230402 0.0% 25/403 6.2% 21997122 NA +5706 chr4 + 190214555 47572125 47572124 47572232 108 TTTCTCTCCTTTTTTTCTGCCTCATGAAGGTGATGGTGCCAATGATGTTAGCATGATACAAGTGGCAGACATTGGGATAGGGGTCTCAGGTCAAGAAGGCATGCAGGT chr4 - 94230402 25572629 25572628 25572728 68657675 68657674 68657774 100 TTTCTTACCTTTTCTC--------TGTAGGTGATGGTGCCAATGATGTCAGTATGATCCAGGTAGCTGACACTGGTGTGGGAATCATGGGCCAAGAAGGCATGCAGGT .....:x......:.:--------..x.....................:..:.....x..:..:..x....:...x:.:..::..x::..:................. 16M8D84M 79/100 79.0% 100/94230402 0.0% 8/100 8.0% 21999496 NA +10165 chr4 + 190214555 47572869 47572868 47573006 138 CAGGCTGTGATGGCCAGTGACTTTGCCGTTTCTCAGTTCAAACATCTCAGCAAGCTCCTTCTTGTCCATGGACACTGGTGTTATACACGGCTTTCCAACATGATTCTCTATTTTTTCTATAAGAATGTGGTATGTAAC chr4 - 94230402 25573175 25573174 25573312 68657091 68657090 68657228 138 CAGGCTGTGATGGCAAGTGACTTTGCGATTTCTCAGTTCAGGCATCTCAGGAAGCTTCTGCTTGTCCATGGTCACTGGTGTTATACCAGGCTTACCAACATGATACTCTACTTCTTCTACAAGAATGTGGTATGTAGC ..............x...........x:............::........x.....:..x...........x..............xx.....x..........x.....:..:.....:................:. 138M 121/138 87.7% 138/94230402 0.0% 0/138 0.0% 21999694 NA +13405 chr4 + 190214555 47576758 47576757 47577011 254 TCTTTGTGTCTCTAGGCCTATGTGAACCTCCTTTTCTGGTACCAGTTCTTTTGTGGATTTTCAGGAACATCCATGACTGATTACTGGGTTTTGATCTTCTTCAACCTCCTCTTCACATCTGCCCCTCCTGTCATTTATGGTGTTTTGGAGAAAGATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAACTTTACAGAAGTGGTCAGAAATCAGAGGTAGGTGTTAAAGCAAGAGTGCTTGGATGGATGCATAT chr4 - 94230402 25573766 25573765 25574013 68656390 68656389 68656637 248 TCATTGACTTTTCAGGCCTACGTGAACCTCTTATTCTGGTACCAGTTCTTCTGTGGGTTTTCAGGCACATCAATGACTGACTATTGGATCTTGATTTTTTTCAATCTCCTTTTTACATCGGTGCCACCCATCATTTACGGTGTCTTGGACAAAGATGTGTCTGCAGAGATACTCATGCAGATCCCACAGCTGTACGTGATGAGCCAGAAATCTGTGGTAG--GTTA----AAGAATGCTTGGCCTGAAGCAAAT ..x...xx.:.::.......:.........:.x.................:.....:........x.....x........:..:...:.:.....:..:.....:.....:..:.....x.:x..x..::.......:.....:.....x...................:x........:x.x..xx.:..x...:x:.xx:.:........x.x.....--....----....:.......x:x..x...x.. 220M2D4M4D24M 193/248 77.8% 248/94230402 0.0% 6/248 2.4% 22002992 NA +5766 chr4 + 190214555 47580376 47580375 47580484 109 CCGTTATCT--GCTTCATTTCT------------AGGCATACTTACCCCATACCTTCTGGATCACCTTATTGGATGCTTTTTATCAAAGCCTGGTCTGCTTCTTTGTGCCTTATTTTGTGAGT chr4 - 94230402 25575531 25575530 25575653 68654750 68654749 68654872 123 CCGTTATCTTTGTTTTGTTTTTGTTTTTTCTTACAGGCCTACTTGCCTTCAACCTTTTGGATAACCTTGCTGGATGCTTTTTACCAAAGTCTTGCTTGCTTTTTTGTGCCTTACTTCGTAAGT .........--.:..::...:.------------....x.....:..::xx.....:.....x.....::.............:.....:..x.::.....:...........:..:..:... 9M2I11M12I89M 86/109 78.9% 123/94230402 0.0% 14/109 12.8% 22004845 NA +5720 chr4 + 190214555 47581948 47581947 47582089 142 CTCTCTTTGTAGACCTACCAGGGCTCAGATACTGACATCTTTGCATTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTTTGGTGAGTGGTTTTCTTGCCTCTGAAG chr4 - 94230402 25575886 25575885 25576024 68654379 68654378 68654517 139 CTTCCTTTGCAGACTTACTGTGGCTCAGACATAGACATTTTCTCCTTTGGAAACCCTATAAACACAGCAGCACTTTTTATAATATTGTTTCACCTTCTCATTGAGTGCAAATCTGTGGTGAGTACTTTGTTT---CCTGAAG ..::.....:....:...::x........:.:x.....:..:x.x...........:x.:........x..x..x..:..x:.x:.x:.:..:..xx.......:x....:xx.x........:x...x:..---:...... 132M3D7M 97/139 69.8% 139/94230402 0.0% 3/139 2.2% 22006062 NA +3080 chr4 + 190214555 47587955 47587954 47588008 54 TTTGTTTTTATATTTTTGTTTGTTTGTTTGTTTTTCATGTAGTGGCATGAACCT chr4 - 94230402 30753427 30753426 30753480 63476923 63476922 63476976 54 TTTTTTTTCATTCTTTTATTTGCTTGTTTGTTTTTCAAGTAGTGGTTTTAATTT ...x....:..x:....:....:..............x.......:x.x..::. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 16834528 NA +5574 chr4 + 190214555 47591007 47591006 47591151 145 TGAATTTAATTCTAATGATGTTCCTTGTCACCTAGGTTTGTATACA--------GAGTTCTTCAGGGATCCCTGTTTCCATCTCCAATTCTGAGAGCTAAGCACTTTGACAGACTAACTCCAGAGGAGAGGACTAAAGCTCTCAAGAAGTGGA chr4 - 94230402 25578095 25578094 25578247 68652156 68652155 68652308 153 TGAGTCTGCTTCTAACCAGCTTATTTGGAACCATATTTTGTAGATATTTCCTGAGGGCTCTCCAAGGAACATTGTTTCCATCTTCAGTGTTGAGAGCCAAGCGCTTGGACAAACTGGTCCCCGAGGAGAAGAGGGAAGCAATTAAGAAATGGA ...:.:.:x......:x.xx..x:...xx...xx:x......x.:.--------.:.:...:..:...x.x:...........:..:.x:.......:....:...x....:...::::..x.......:..xx:....xx.:.....:.... 46M8I99M 99/145 68.3% 153/94230402 0.0% 8/145 5.5% 22012912 NA +12108 chr4 + 190214555 47595673 47595672 47595916 244 CCATTTTCTTTTAGTGTAGCTGGCAAAAGTCTCTGATCATCCTTATAATTAGTTTAGGAGAAAGGTCTGGATGTAAATCTGTCTTTTAATCCATTCGACGAAATATGACACATTACTATAAACGCCAGGCCCCAGGACTTTGGAAAAGCAGACGGAGCCCCATGAAGTTAATCCAAATAATGTCCACCGTCCTCCAGGCTTCTCACAAACAAGAGGCCCACCGCTGTCACCCTGCAATAAGTAA chr4 - 94230402 25585407 25585406 25585645 68644758 68644757 68644996 239 CCATTTTCCTGTTGCTT-GTCAGCACAATTCTT--ACCATC--TGGCGTTAGTTCAGCAGAAAGGTGTGGATGTATATTTGTTTTTCAATCCAGTCAATAAAATGTGACACGTTGCTGTAAACTCCTGGTCCCAAAACCTTGGAAAAGCAGACAGAGCCCCAAGATGTTAAACCAAACAAAGTCCAGCGTCCTGCAGGTTGCTCACACACAAGTGGTCCTCCACTGTCACCCTGCAAAATGAAA ........:.x.x.:x.-.:::...x..x...:--.:....--.:xx:......:..x........x........x..:...:...:......x..:.::....:......:..:..:.....x..x..:....::..:..............:........x..x.....x.....:..x.....x......x....:.x......x.....x..:..x..:..............x.x.x.. 17M1D15M2D6M2D201M 184/239 77.0% 239/94230402 0.0% 5/239 2.1% 22010266 NA +9758 chr4 + 190214555 47600209 47600208 47600460 252 CTTACCATGCATGAATCAACTGTGCCAGACTCATAGCCAGCACATATCATCCGAGTGGTGATGGTCTTCATGTCAAAGTAGGACTGACAATGTTCCAGAGAAATAATGCGGACCTCTCCCTCTTGCAGCTTAAATGGCACTGAATTTTTAAA---AAATAAGAAT--ATATATATGATGATAAAATGACTCAAAAGTGA--GGCTAGTGAGGCTAGCCAAATATG----------AAATGCAAATATAA---TATAAATATTTTTATACCAA chr4 - 94230402 25586161 25586160 25586427 68643976 68643975 68644242 267 CCTACCATGCAAGAGTCTACAGTGCCAGACTCATAGCCTGCACACAGCATCCTGCTGGTAATAGTCTTCATGTCAAAGTATGACTGGCATTGTTCTAAGGAAATGATGCGCACTTCTCCTTCTTGGAGCTTAAAAGGCACTGAA-----AAACAGAAATCAGCATTAATACATATGGACATACAAATATTTATTTGTGATGGATCTTTGAGATATGATAAATATTTCCTTTAGACAAATCTAAATATTACTTtatatatgtttgtatataaa .:.........x..:..x..x.................x.....:.x.....x:x....:..:.................x.....:..x.....:.::.....:.....x..:.....:.....x........x.........-----...---....x..x..--...:.....:xx...x..xx.:.:.xxx....--.:::xx....::xx.x:......x----------....x:......x.---....x..:...x....:x.. 144M5D3M3I10M2I32M2I24M10I14M3I20M 188/247 76.1% 267/94230402 0.0% 25/247 10.1% 22014048 NA +17085 chr4 + 190214555 47603392 47603391 47603670 279 CTTACTTTTATTGCCCATGTGGCCCCAGCCTGTGATATAGCAGTACGTGTCAGGCTCTAGCCACTGCTCCGGGTTGGGCAAGCAGACAGGCCGGACGTAGCCAGTCTCACTGATGTCTTCACTCAGCTCAACGATGCTGATGTCATAGTCCACCACTGCTCGACTGTAGCGGGGATGCAGGATGATGGTCTTCACAAAGCGTGTCTGCATGAACACTGATGGATGGTCTAGATTGTTGATGCCAAGCACCACTTTCCAAACTGCAGCATTCTCTCTCCT chr4 - 94230402 25587847 25587846 25588125 68642278 68642277 68642556 279 CTTACTTTTGTTGCCCATGTGTCCCCAGCCTGTGATGTAGCAGTAGGTATCTGGCTGTACCAACTGTTCCTTGCTGGGCAAGCAGACAGGTCTTACATAGCTCGTTTCATTGATTTCTTCATCTAGTTGTACAATGCTGATATCATAGTCTACAACTGCTCTGTTGTAGCGTGGATGCAAGATGATGGACTTCACCAGTCGGGTCTGCATGAAGCTTGATGGATGATCAAGATTGCTTATCCCAAACACTACTTTCCAGACAGCTGCATTTTCTCTCCT .........:...........x..............:........x..:..x....x..x.x....:...xx.:................:.xx..:....:x..:...:....x......:::..:.xx..:........:........:..x.......x::.......x.......:........x......x.:x..x...........xx:.........:..x......:.x..x....:...:........:..x..x.....:........ 279M 223/279 79.9% 279/94230402 0.0% 0/279 0.0% 22015545 NA +3523 chr4 + 190214555 47606619 47606618 47606749 131 CCTTCCTACCTTCTTTCCCTCCTTCCTTTCTTCCCTCCTTCCTTCCTTCCTTTCTTTTTCTTTCCTTTTTTCCTTCTTTCTTTTACTTCTTTCTTCCTTTCC--TTTTTTCCTTCTTTTCCTTATTTCTTCCT chr4 - 94230402 85832816 85832815 85832943 8397460 8397459 8397587 128 CTCTTTTACCCTTCTACTCCCCTT--TTTCCTGGCTTCTTTCTGCCCCACATCTTTTGTGCTTTATTTTTTCC-TCTTGCTCTTGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCT--CTCACTTCCTTCT .::.::....:.::.x.:.:....--....:.xx..:...:..x..::x.x.::...x.x:..:x........-....x..:..:::..x...x.....::.--:...x.......:.--..:.:...:.:.. 24M2D47M1D28M2I14M2D13M 83/126 65.9% 128/94230402 0.0% 7/126 5.6% -38226197 -56004205 +3709 chr4 + 190214555 47606644 47606643 47606802 159 CTTTCTTCCCTCCTTCCTTCCTTCCTTTCTTTTTCTTTCCTTTTTTCCTTCTTTCTTTTACTTCTTTCTTCCTTTCCTTTTTTCCTTCTTTTCCTTATTTCTTCCTTCTCTTCCTCCCTTCTCTCCTTTCTTCTTTCTCTCGTTCCTTCCTTTTTCACT chr4 - 94230402 34857648 34857647 34857799 59372604 59372603 59372755 152 CTTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATT-TTCCTTTTATTACTTACC------CTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATT ....:.:.:..:x..xxx.::x:.....x..x..::.....x..x.:x..-..:......:.x...x.:------.:...x..x..x:...:....x.x.:x.::..:......:....:x:.:..:.:x..x..x:.x.::..::.:.:...x.:.:. 50M1D18M6D84M 93/152 61.2% 152/94230402 0.0% 7/152 4.6% 12748996 NA +3122 chr4 + 190214555 47618341 47618340 47618408 68 AAAAGGAAAGGAAAGGAAAGGGAAGGGAAGGGAAAGGAAGGGAAAGGAAAGGAAAAATGTGATCTTGA chr4 - 94230402 28060523 28060522 28060590 66169813 66169812 66169880 68 AGAAGAACAGGTGTGCAAAGGTAAGCTAAGAAAAAGAGAGGGAAAGCAAACGTGAAATGTGATCTTAA .:...:.x...x:x.x.....x...xx...::....::........x...x.x:............:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 19557818 NA +3001 chr4 + 190214555 47623077 47623076 47623130 54 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACACA chr4 - 94230402 80495418 80495417 80495471 13734932 13734931 13734985 54 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCA ..:..:.x...:......x.:.......:.:.x.:.x....:.........x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -32872341 -61358061 +12454 chr4 + 190214555 47623566 47623565 47623760 195 CTTACCCCTCGAAGCAGTGGGCAACTGTCAGAACCCACTTCTTGGCAATGAGGACACAGCCACAGATATGTCCACTGGGTTCACTCTGCAGAGAACACTGCCATGGCCACCTTCCAGGGCGACTCGTCCGACCTCCAAGGATCCTTTTGTTCATTCGGGCAGCAGGGCGGCGCCCACAGTCTACCAAGGAGCAGA chr4 - 94230402 25590733 25590732 25590927 68639476 68639475 68639670 195 CTCACCCTTCAAAGCAGTGTGCTACTGTTAAGACCCATCTCTTTGCAATCAAAACACAGCCACATATGTGTCCACTTGGCTCGCTCTGCAGAGAGCACTGCCATGGCCATCGACCTGGGCGACTGGTCCTGCCACCAAGGATCCTTTTGTTCATGCGAGCAGCAGGGCGATGGCCACAATCTAGTGAGAAACAGA ..:....:..:........x..x.....:.::.....::....x.....x.::...........x..:........x..:..:...........:..............:.xx..x........x....x:..x....................x..:...........::.x.....:....x::..:.:.... 195M 156/195 80.0% 195/94230402 0.0% 0/195 0.0% 22032833 NA +3694 chr4 + 190214555 47623890 47623889 47623976 87 TTCTCTCACCTTGTTTAGTACACAGAAGAGAAATTTTACTTCTGCTCTCACAAGACTGCCTGGAT-TTGGAAACATAAAATGGTATAA chr4 - 94230402 25592446 25592445 25592533 68637870 68637869 68637957 88 TTCTCTTACCTTCTTTAGTGCAAAGTAGAGCCACTTTGCTTCTGCTTTGGCACATCTGCCTAAATATTGGAAAAAGAACATAATGAAA ......:.....x......:..x..x....xx.:...:........:.x:..x:x......::..-.......x.x..x..::.:x.. 65M1I22M 63/87 72.4% 88/94230402 0.0% 1/87 1.1% 22031444 NA +4839 chr4 + 190214555 47626400 47626399 47626539 140 CTTACCCATTTACTAGAAGTTCATGTAAAGTGGTCCCATTGAGGCTCTCCCAGTTGGAGTGTAATGTCAGCCAC------CGCGGCTCTTTCTCCTGTTCCTGTATCAATTTGGTCACAGATGGTTCTCTGATACAAGGCAAATAC chr4 - 94230402 25593869 25593868 25594014 68636389 68636388 68636534 146 CTTACCCATTCACTAGAAGTGCATGTAAAGTGGAAGCATTCTTACTCTTCCAGTCTGAGTGCAGATGCAGCCACTTTTGTTGCTGCATTTCTCCATCTTCTAATACAATCATTGTTTTAGATGGTCCTCTGAAACGAATGAAAGAC ..........:.........x............xxx....xxx:....:.....:x.....:.:xxx.......------:..x..x:..:::.x.x...:x:..:x.x:x.x..:x:.......:......x..:.:xx...x.. 74M6I66M 95/140 67.9% 146/94230402 0.0% 6/140 4.3% 22032531 NA +10221 chr4 + 190214555 47641880 47641879 47642072 193 TTCTGAGAAATTCATCAGTGCTACAAACTACTGACCTTACCCTAAACCCATCTGCTTGCAGGCCAGCTGACTCAATATCTCCTGCCAGCCATCTGCACACACATGGTGTTCTGTGGCAGCTCTGTGAACCATCAGAAAGGAAGAGGAGTTCACATTTATAGAGAGGGTCACTAGGGAAAGAAAAGACAAGGGA chr4 - 94230402 25600559 25600558 25600750 68629653 68629652 68629844 192 TCCTAAGAAATTCACCAATGCTACAAACTACTGACCTTACCCTAAACCCATTTGATTGCAGGCCAGTTGGCTCAAATTTTCTTGCCACTCATCAGCACAAACGTGATTATCAGCAGCTGACCTGTGAACGGTCAGAAACATCAGGGAATTCATGTTTTTAGACAGGGTAACT-GTGAAGAAAAAGAAAAAGAA .:..:.........:..:.................................:..x...........:..:.....xx.:..:.....x:....x.....x..:..:.xx..x.::..x.x:........x:.......x:xx::...:....::...x....x.....x...-.x...::......x..:.:. 172M1D20M 146/192 76.0% 192/94230402 0.0% 1/192 0.5% 22041321 NA +7596 chr4 + 190214555 47643124 47643123 47643293 170 ATGGCAGAAACAAGTAGCTCACCACAGTCCCATTCATCTGAACTGTCTGAGCAGTCGGCTTCACCATCACACCACAGGTCACGTGACACACACGCATGGTTTGCACATTCCAGCTCATCATCTTGGCAAAATGCTGGCATGGGGAACAAAAAG--------TGAGAAGGAAAACATTT chr4 - 94230402 25602379 25602378 25602549 68627854 68627853 68628024 171 ATGGCAGGAAC-------TCACCACAGTCCCACTCATCTGAGGTGTCACTGCAATCTGCTTGTCCATCACACCAAAGTTCACGTGGCACACATTCATGGTTGGCACACTCAAGCTCATCCTTCTCACAGAATGCTGCAAGGAGGAGAAACACAGTTCACTCTGAGAAAAAGAATATCT .......:...-------..............:........:x....xxx...:..x....xx...........x..x.......:......:x.......x.....:..x........x.::.x:..:.......xx.x.:...:x..x.x:--------......::.:..:..:. 11M7D135M8I17M 124/163 76.1% 171/94230402 0.0% 15/163 9.2% 22040745 NA +8850 chr4 + 190214555 47645061 47645060 47645225 165 AAATTCGCATAAGCACTTACAGCAGTTTTTCTCGTCCATGTAATCAGGGCAGTCTGGGAACCCATCGCAGATCACTGTGTGCTTCAAACATTGTTTATTGGATGGACATTCCCAAAGATCTCTCTCTTTACAACCTAGAGACAGAAG------------AAAAGGTTATTTGCAATA chr4 - 94230402 25603155 25603154 25603331 68627072 68627071 68627248 177 AAAACTGCATAAGCTCTTACAGCAGTTCTTTTCATCCATCATGTCAGGGCAATCTGGGAAACCATCACAGATCATTGTGTGCTTGATACAGAGCTTCTTCAAAGGACACTCCCAGAGACCTCTTTCTTTACAGCCTGGAGGCAGAAAAGCACAATTTTCAAATAATTGTATGCAATA ...x::........x............:..:..:.....xxx:........:........x.....:.......:.........x.x...xx.:..x..x:.x.....:.....:...:....:........:...:...:.....:------------...x::..:.x....... 147M12I18M 128/165 77.6% 177/94230402 0.0% 12/165 7.3% 22041906 NA +3159 chr4 + 190214555 47646030 47646029 47646069 40 CCTCCACCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGTGA chr4 - 94230402 52964877 52964876 52964916 41265487 41265486 41265526 40 CCTCCCCCTGCCTCAAAAAAAAAAAAAGAAAAAAAAGTAA .....x....:................:..........:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -5318847 -88911555 +8938 chr4 + 190214555 47652184 47652183 47652432 249 TCTAAAAACACTGTACATTCCTCCATAACAAAATTACCCCAGA-CATTGTACCATCATTCTGACAGCTGAAGTTTTCCAGAAGATGCATTAGTCCATATTTATAGGAGCTGACAGGATTTCAGTTGATTGCTTGTGACATTTTTGTCTAGATCAGAAGGGCA-----ATGTTTACCACCTAAAATTCACTTAATGGAGCAACGCAATATTTCATACTTCAAAGGCCAAAAGAATGAAATTATTTCAAAAGATGTA chr4 - 94230402 25606766 25606765 25607018 68623385 68623384 68623637 253 TCTACAAGGACTGTCTGTTCTTCAGTAACAACATTACCTCTGGTCAATGTAATGTCACCCTGACAGCTATAATTTCCTAGCAGATAGAGCTTTCCATATTTATAGATGCTGATAAGAATTCTGCTGATTGCTAGTGACA-TTCTGTCTAGACTATAGAGACACAGAGAGATCTACTGGA-AAAATTAATGTTACATATTAGGGCAATATTTCATATGTTAATGACTAGGAGAATAAAATTATCCTAAAAGACATA ....x..:x.....x::...:..x:......x......:.x.:-..x....x::...::.........:x.:...:.:..x....:x.x:xx.............:x.....:.:..x...x.:........x......-..:........::.x.::.:..-----.x:.:...::xx-......x.:x.x.::x.x:.:x.............:x.:..x.:.:.::.....:.......:::......::.. 43M1I95M1D22M5I12M1D75M 169/247 68.4% 253/94230402 0.0% 8/247 3.2% 22045418 NA +8685 chr4 + 190214555 47653528 47653527 47653673 146 GAAAAGTACCATT--GCACATACA-------TACCACAGTTTTCCTCATCACTGTCATCGTCACAGTCGGCCTGGCCATCACATCTTCTGGAAGCCAGAACACACTGTCCTGAGCGGCACTTGAAATGACTAGGTGAGCATTCTATTAAAAACAA chr4 - 94230402 25608239 25608238 25608393 68622010 68622009 68622164 155 GGAAAGTACCCTCCAACTCATATAATTTATTTACCACAGCTGTCTTCATCACTGTCATCCTCACAGTCAGCTTGACCATCACATCTCCTGGATGCCAGGACACACCTTCCTGAACGGCATTTGAAGTGGCTGGGTGAGCACTCTGTTAGTGACAA .:........x.:--:.x....:.-------........:.x..:..............x........:..:..:...........:.....x.....:......:x......:.....:.....:..:..:........:...:...:x:.... 13M2I9M7I124M 118/146 80.8% 155/94230402 0.0% 9/146 6.2% 22045289 NA +3925 chr4 + 190214555 47656213 47656212 47656313 101 TGGCATGATCTTGGCTCACTGCAGCCTCCACTTCCCAGGTTCGAGTGATTCTCATGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCGCCTGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ......x..x..------..:.....:xx.x:.:.::.....:....x...x..x.x.........:...........:.:....x.:..--:....::.. 12M6D72M2D9M 69/93 74.2% 93/94230402 0.0% 8/93 8.6% 29459099 NA +3208 chr4 + 190214555 47657538 47657537 47657599 62 AAAAAAAAAAAAAAAAGAAAAAGAAATACCTGATAGTGCATAATTTATAAAGAGGTTTATTT chr4 - 94230402 10933977 10933976 10934038 83296365 83296364 83296426 62 AAAAAAAAAAAAAGAAGAAGAAGAAAGAACTGACAGTATGTATTTTTCAAAGAACCACATTT .............:.....:......x.x....:...:::..x...x:.....:x:x:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 36723561 NA +10092 chr4 + 190214555 47661709 47661708 47661936 228 ACCTTCCACATATTCATCAGGCATCAGGCAGGTTTGATTGTCTGAATTTTCCTCTGGAAATTGACTGCAATCTGTGTCTTCAGGCCACTGTAGGCCCACAATCCCAAGAACAGACTCACAGCGTTCTTTAGAGTGTTCACACAATGCCCTAGATGAACA--------------AGAAAGACAAAACATTAGAAGCAGAAATAGCTCCATCTGAGACAGATGTCATAAATTTATGTCAAGTTT chr4 - 94230402 25609729 25609728 25609966 68620437 68620436 68620674 238 ACCTTCTACGTCCTCATCTGGTGTCAGACAAGTTTGATTGTCTGAGTTCTCATCTGGAAACTGAGTGCAGTCAGTATCCTCCGGCCACTGCAGACCTACAATCCCAAGCACAGACTCACAGCGTTCCTTAGACTGTACACATAATGTCCTGAGGAGACAAAGTGGAGTTGCACAGAATAACTGAGCAAAAGCCTTAGAAATTGCCATGTTT----TAGAAGTTAATAATTCTAGCCAAATTT ......:..:.x:.....x..::....:..:..............:..:..x........:...x....:..x..:..:..x........:..:..:...........x.................:.....x...x....:....:...:::x::...--------------....x:..x:.:..xx..xxx:......x..:x::.:.----:...x..:.xx....:xx.:...:... 159M14I38M4D27M 163/224 72.8% 238/94230402 0.0% 18/224 8.0% 22051980 NA +14395 chr4 + 190214555 47665025 47665024 47665274 250 ATATTACCTGCAAGGAGGGATATGCTCGCCTGTATTCACATCACATTTTGGTACCAAAATGGTGCAAGAAAAGAACATGAGGTATTTATAACAGTTGGTTTGAACAAGTGCAGGGAAAAGAGAAGACTCCCAGCTGATGGATGCTTCCTTTTGAGTCCTGTGGCCAAAATAATTTGGATAACTTGTACTGTTGTAGGGCAAATTCATGCAGAGTTCCAATGTAATTGGTTCACATTGACCTAACAAAGAA chr4 - 94230402 25615885 25615884 25616134 68614269 68614268 68614518 250 ATAGTACCTGCAAGGTGGGATCCGTTGATTTGTATGGGGGTCACATTTTGGTACTAAGACTGTACAGGCGAAAAACATAAGGTACTTGTAGCAGTTGGTCTGAACCAAGGCTGGGAAGAGAGAAGACTCCCAACTGACAGAAGCTTCTTTCTGAGTCCTGTGCCCCAGGTAGTTTGGGTAACTAGTGTAGTTGTAAGGCAAGTTCATACAGAGTTCCAGAGTAATTGGTTCACACTGACCTTTCACAAAA ...x...........x.....x:.:.x:::.....xx:x:..............:..:.:x..:..:.x:..:.....:.....:..:..:........:.....x.:x..x.....:..............:....::..x.....:..:...........x..x.::..:.....:.....x..::x......:.....:.....:..........:x..............:......xx..x.:.. 250M 191/250 76.4% 250/94230402 0.0% 0/250 0.0% 22049140 NA +8728 chr4 + 190214555 47677925 47677924 47678093 169 GGGACACACTTACTGACGCTGCAGTTCTCCTCATCACTCCCATCCTTGCAGTCCTCGTCACCATCACATTGAAACGTGCTGGGGATACATTGTCCATTTCTGCATTCCACCAGACCCTGGCTGTGACAGGCTAGGAAGGACCATAACAATATTCACTTTATTTATTAAT chr4 - 94230402 25624764 25624763 25624930 68605473 68605472 68605639 167 GGTATATCCTTACTTTCACTGCAGTTTTCTTCATCACTTCCATCTTTACAGTCCTTATCTCCATCACACTTGAACGCACTAGGAATGCACTGTCCATTTTTGCACTCTACCAGACCCTGACTATGACAAGCTGGAAAAAA--AAAATGGTATCCTGATCACTAATTAAT ..x.:.:x......xx.:........:..:........:.....:..:.......::..x........:.x:....::..:..:..:..:.........:....:..:...........:..:.....:...:.:..::.--.x..:::...:.xxx.:.:.x...... 140M2D27M 122/167 73.1% 167/94230402 0.0% 2/167 1.2% 22053161 NA +6595 chr4 + 190214555 47680096 47680095 47680265 170 CAGAAATGGAAAAA--TAAGCAAAACAAACGTCCTCAGAGCACTCACAGCAGTTGACCTCGTCAGACTTATCCACACAGTCGTGGTCACCATCACACACCCACTCCATGGCGATGCAGCGCCCGTCCCCGCAGCGATGCTCTGTTGTGGGATTGCAATCTGGAGAAATGAAA chr4 - 94230402 25625770 25625769 25625933 68604470 68604469 68604633 164 CAGAAAGAGAAAAAACTCATTTAGACA------TTAAGAGAACTTACAGCAATTGATTTCATCTGATTTGTCTATACAGTCATGGTCACCATCACATACCCAATCAGCTGTTATACATCTTCCATCTCCACACTGATGATCAGTCATTGGATTACAATCt--aaaaataaaa ......x:......--.x.x:x.:...------:.x....x...:......:....::..:..x..:..:..:.:......:..............:.....x..x::x.:x..:..x.x:..:..:..:..x:....x..x..::.x.....:......--.:....:... 14M2I11M6D127M2D10M 116/162 71.6% 164/94230402 0.0% 10/162 6.2% 22054326 NA +3359 chr4 + 190214555 47680150 47680149 47680226 77 CCTCGTCAGACTTATCCACACAGTCGTGGTCACCATCACACACCCACTCCATGGCGATG----CAGCGCCCGTCCCCGCAG chr4 - 94230402 43175810 43175809 43175889 51054514 51054513 51054593 80 CCTCGTCAGAGCCATCCGCACAGTCCTTCTCTCCATCACACACGTACTCCTGGGCCACGCACTCAGCG-CCGTCACGGCAG ..........x::....:.......x.xx..x...........x:.....xx...x.:.----.....-.....x.x.... 59M4I5M1D12M 60/76 78.9% 80/94230402 0.0% 5/76 6.6% 4504340 NA +7960 chr4 + 190214555 47683725 47683724 47683850 126 ACTTACCACAGTTTTGCTCATCACTCAAATCCCCACAGTCATCATATCCATCACACACAAGGCTGTAATTAAGGCACTTGCCTGTGTGACAGTGAAACAGATTCTCGCTGCAGTCTGCAAATAAAA chr4 - 94230402 25630500 25630499 25630625 68599778 68599777 68599903 126 ATTTACCACAGTTCTCTTCATCACTAAGGTCTCCACAGTCATCATATCCATCACAAACAAAGGTATAATTGAGGCATTTTCCTGTGTTGCAATGAAATAAATCGTCACTGCAGTCTGCAAAACAAA .:...........:.x:........x.::..:.......................x....:.x.:.....:.....:..x.......x:..:.....:.:..:x..:..............xx... 126M 101/126 80.2% 126/94230402 0.0% 0/126 0.0% 22053225 NA +3165 chr4 + 190214555 47689296 47689295 47689373 78 TGAGAGATATTCACTATTTATTGTTTCCATTGTACTACTGAAGAAACTGAGGCACAGAGAGGTTGAGTAACTTGCCTA chr4 - 94230402 10729180 10729179 10729257 83501146 83501145 83501223 78 TGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ..x...:..xx:.x.xx:...::x:......x...x:x..:::.............x.x.....:.....:.....:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 36960116 NA +9642 chr4 + 190214555 47692964 47692963 47693168 205 ACATACTGCAATGAGCCTCGTCACTCCAGTCGTCACAGTCGTTGTAGCCATTACATTGCAGTTTCCCGGGGATGCAGATTCCACTGGCACACAGAAAGTTCTCACCCCTTCCACAGAGCACTAAAAA-AAAAGGGCAGGAAATA-ATGTCAGAATAAGATGGGTTTTTTTTCTTTTAAGATTACAAAAAATAAATACATAGAAAATC chr4 - 94230402 25635968 25635967 25636155 68594248 68594247 68594435 188 ACTTACTGCAATGAACCTCATCACTCCAGTCATCACAGTCATTGTAGCCATTACACTGCAGTTTCCCTGGAATGCAGATTCCACTGGCACACAGGAAACTCTCCTCTCCTCCACATAGTGCTGAAAATGAGCAAAGAGTAAATATATGTTAGA-------------------TTTTAAATATACGCTAAAGAAATAAGCAGAAATTC ..x...........:....:...........:........:..............:...........x..:.......................:..::....x:.:.:......x..::..:....-:.:x:::x..x.....-....:...-------------------......:xx...:xx...x.....x::.....x.. 127M1I16M1I8M19D35M 147/186 79.0% 188/94230402 0.0% 21/186 11.3% 22056996 NA +11199 chr4 + 190214555 47744358 47744357 47744659 302 TCAAATAAAATCTTCTAAA---AATGAAATG---AAACACAGACACCTACATTGCTTTCCGTTTTCCTGCTGAGGTGAGAAGCAAATTCTGCTGACATTGCTGCTTTCAGTTTGGTTTCTAAACTGGGAGCATCTGAGGAAATCCGGCCAGGAGTAATTCACCATCCCCAGGACTGATTCACAGCCTTCTTTTGCAGCCTCACAGAAGGACCTACAGGGCAGGAGTCCATGACTAAAAAAAAAA---AAAGAGAAAGGTGAAAATTAGTGT--CTTTACAGAATAG----GTTTTGAAATAATAGTGAAATTAAAGT chr4 - 94230402 25645599 25645598 25645914 68584489 68584488 68584804 316 TCAAATAGGAATCCTTGAATATAGTGTAATATTTAAGAACAGAAACATACATTGCTTTCCTTTTTCTTGGTGTGGCGAGAAGCATACCCTTGCAGTTGTGTCGTTTTCAGTTTGGTTGTGGAATTGAGAGCACTTGAGGAATTCTGGCCAAGAAGCATTTACCATCCCTAGGACTGGTTCACACCCTTCTTTTGCTGCTTCACAAAATGTTCTGCATGGCAAGAGGACTCGACTAGAGAAAGGAGACAGAGAACAAAGAAAAAAGGATTATTACTCTAATAAATAGCCATATCTTGAATTAAAAG-AAAATAAAAGT .......::.x::::.:..---.:..x...:---..:x.....x..x.............x.....:..x..x..:........x.::..xx::::xx..::.:.............x:x:..:..:.....::.......x..:.....:..:xx...:........:.......:......x...........x..:.....:..x.x:..:..x....:...xx.x:.....:.:...::.---.:...:x..:.x:....xx.x.:.--..:..xx:.....----:.:.....x...x..-:....x..... 19M3I9M3I210M3I24M2I13M4I15M1D11M 212/301 70.4% 316/94230402 0.0% 16/301 5.3% 22098759 NA +3059 chr4 + 190214555 47761961 47761960 47762043 83 TCTCTAAGTGTGTATATATATACACACAAATATATACATATATACACACATATATATACACATATTAATGTATATATACACAT chr4 - 94230402 50941864 50941863 50941935 43288468 43288467 43288539 72 TCTTTAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTT-----------TGAATACATACGTAT ...:...:.x.x.......::...x...x......:...x......:::......x.-----------..x...:....::.. 57M11D15M 54/72 75.0% 72/94230402 0.0% 11/72 15.3% -3179903 -91050499 +3042 chr4 + 190214555 47762013 47762012 47762114 102 TATATACACATATTAATGTATATATACA------CATGTATACACACATATATGCACACATACATATATGTATGTGTCTGTATATATATGTACACACATATGTGTATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::.::......x..::.:.......------....x:....:..:....x.:....:x::....:..x:.:::.x.:x...:::x:::.x.x...:.::...... 28M6I74M 62/102 60.8% 108/94230402 0.0% 6/102 5.9% -25359089 -68871313 +15937 chr4 + 190214555 47763330 47763329 47763713 384 TTCTGCTATAACCAACTCTTATCACTGAATAATCTGGGTTCCGAAATACCTGTCATCGCCATCAATGATGCACTCAGGGAAGGCGAGGGTACAGCCAAACAGCATGATATGTTGATAGCAACTGAGGCGATGGAGATATGTGAAAAACTTGAGGAACTTTTCCATTTCCATGTTTCTGACAACTGAGAGGAGAGGTGTCAGCGTGGCGTGG---TAGGGCAGCATCTGACACTGGCTGTGGGTGATGTTCATACAGGCACCTGGGAAGT--------------------AAAGACATGCACATTTAAGAGTGGACACATCAGAAGTATATGTTTGCAAACTCATTTAATATTTGTTTATAAGATAAAGTATACTTATCAC----AAGAAAAAATTTAGATATGCAATCATA chr4 - 94230402 25664586 25664585 25664994 68565409 68565408 68565817 409 TTTTACCACAATTGGCTCTCATCACTGACTGATTTTGGTTTCCAAATACCTGTCATCACCATCACTGATGCATTCAGGAAGAGCAAGACTACAGCCAAACAGCATGATGTGTTGATAGCAGCTGAGACGACTGAGATAACTGAAGAACTTCAGGAACTTTTCCATTTCAGTACTTTTGACAATGGAAAGAACTGAAGTTAGAGTCGTGTAGTTATACGGCAGCATTTGGCACTGGCTGTTGGTGATATTTATGCAGGCACCTGTGAAATCAAAAGAATATATTTAGAACAAAAGTATCACCATTTAATAGTTGGTTCAAAGTATGTATTTAATTGGGAAGTCAGCAAATA-CAGCATATAAG-TAATGTCTATTCCTCACGGATAAGGTGACATTCCATAATGCTATCACA ..:.:.:.:..::::....:........x.:..:.x....:.x..............:......x.......:.....:.::..:..:x...................:...........:.....:...:x......xx....:.....x.................x:.::..:......:x..:..:.xx.:x..:..x..x.:..:.---..x........:..:..........x......:..:..:..........x...:.--------------------...:::..xxx.......x...x.::x..xx:x.x....x.:x...x:..x...x:x....-:x.:x......-...x..x..:.:x....----...:x:.x...:x:xx....x....:. 211M3I55M20I61M1D11M1D17M4I27M 277/382 72.5% 409/94230402 0.0% 29/382 7.6% 22098744 NA +9602 chr4 + 190214555 47806896 47806895 47807088 193 CACCCACCAACATAGGAAAGCAGGATCACCAGCAAGAGAACGAGAGCACAGATACATGGAATCAGGACCAGCAATAGGAACCGGAGGAGGTTAGCAGTCGCCAGCTTCTGAGAGCAGCCATTGCCCATGTTATTGTCATCAGCTCTCAAGACCT--AAAGTAAAAGAGGAAAATGCAACATGGTTTTAGTTTTAC chr4 - 94230402 25690497 25690496 25690689 68539714 68539713 68539906 193 CACCCACCTACAAAGGTAAGCAGAATAACCAGCAAAAGGATAAGGGCACAGATGCATGGAATCAGAATTAGGAGCAAAAGTCGAAGGAACTTGGCAGAAGCCAGTTTTTGAGAGCAGCCATCCCCCACGTTATCCTCATCTGCTCCTAAGACCTGAAAAACAAAAGAGCATAGTTC--TATCATTTTGGTGTCAC ........x...x...x......:..x........:..:.::..:........:...........:.::..x.::.::.::..:....:x..:....xx.....:..:.............:x....:.....:x.....x....::.......--...::.......x.x.:.x.--:..x:....:..x.:.. 154M2I20M2D17M 142/191 74.3% 193/94230402 0.0% 4/191 2.1% 22116399 NA +9644 chr4 + 190214555 47848066 47848065 47848352 287 ATATATATCATGTTCTATAATATACATTTTCTAATATTTCAAATTTAACAACTTATCTAAATCCAATCTGAGTTACATTAAAAGATCAAAACTTTTTTTAATT--GACATCATGGGTGATGTACCAGGCAAACACTACAACCACAACTCCACACACTGA------AATGAGATAATATTTATGTTTTTGCCATAGTGATAGCTCAACTGCCACTTCATCTCTTTTCCTGTTCTTCTTCCGACGACCCTTCAGTCTGTTTTCAAAAGCTTCTAGTTCAGCCTAAATAAAAACAGCA chr4 - 94230402 25711947 25711946 25712228 68518175 68518174 68518456 282 ATGCACATTAAGTTCTGTTGCATACAAACTA-AACGTTCTAAGAATAATAG-TTACCTAAAGCCCAACTGAGGTATACTGAATACTGAGA--------TGATTCAGTCATTGTAGACCATGAGCCATGCAACCATCACAACAGCAACTCCAAACACTGGCAGCATAATGAGGTT---TTTATATTTTTGCCATGATGACTGTTCAATTTCTACTTCATCTCTTCTCCTCTTATTCTTTCTTCGTCCTTTTAATCTGTTTTCAAAAGCTTCCAGTTCAGCCTACAAGAGAAAACCA ..::.:..:.x.....:.x::.....xx:.x-..::..::..:xx...:.:-...:.....x..x.x.....x..:.:.:..x:x.x.:.--------.:...--.x...::.:.::x...x:...x....x..::.....x:........x......:------......:.x---.....:..........::...:x.:....:.x.:............:....x..x.....:.xx..x..:..:.:..................:...........x.x:.:..x.x.. 31M1D19M1D38M8D5M2I54M6I9M3D118M 193/274 70.4% 282/94230402 0.0% 21/274 7.7% 22136119 NA +5635 chr4 + 190214555 47851080 47851079 47851163 84 ATTTTGTTTGGTTACCTGTTGTCTTCGTTTTTCTTCTTCAAGAGCAGCTTTGGCTTCTGCTTCTTTTATCTGTTTATACACATA chr4 - 94230402 25715206 25715205 25715288 68515115 68515114 68515197 83 ATTATGTTTGAT-ACCTGCTGTCTTCGTTTCTCCTCTTCAATAGCAGCTTTGGCTTCTGCCTCTTTTATCTGTCCAGACATACA ...x......:.-.....:...........:..:.......x..................:............::.x...:.:. 12M1D71M 71/83 85.5% 83/94230402 0.0% 1/83 1.2% 22135874 NA +5647 chr4 + 190214555 47851832 47851831 47851944 113 AAATGATATTTAAC---GAGACATTACCTCAGATGCTTTCCGCTTCATTTCCTTGCACGTTGTGTCACATTCTATTGAAACCTGATTTTCACGTACTTTGTTGCACTGCAATTCCT chr4 - 94230402 25718229 25718228 25718344 68512059 68512058 68512174 116 AAATTATAACTAAAATGGATACGCTACCTCAGACGCCTTCCGTTTCATTTCCTTGCATAATGCATCGCACTCCAGTGAAACCTGGCCTTCTTGAATCTTGCTGCACTGTACTTCCT ....x...x:...x---..x..::.........:..:.....:..............::x..::..:..:..:.x.........:::...x:.x.::...:.......:.x..... 14M3I99M 83/113 73.5% 116/94230402 0.0% 3/113 2.7% 22133603 NA +7682 chr4 + 190214555 47855018 47855017 47855183 166 ACTTATATAGAAAAG----TATTTTCAA-----TAACTTAAAATATTTACCTTTTTTATTCTTTTACAAGGACATCTAAGTTTTACCTTCTGGTTGCAGTTAAAGGGACATTCACCAGGATGACACATCTCTTTGCATCTATGACCACAAGGAAGCTAAAATAAAATCAAAATAA chr4 - 94230402 25721223 25721222 25721394 68509009 68509008 68509180 172 ACATACAAAGAAAATACATCATTCTCAGAACTGTAACTTCAAA-ACTTACCTTTTTCAGTCTCTTACAAGGACACTTGAGTTTAACCTTCTGGCTGCAGTTCAGAGGACAATCACCTGAATGGCAAATCTCTTTACACCGGTGACCACAAGGCAACTACA--AACAGCAAAACAA ..x..:.x......x----:...:...:-----......x...-.:..........:.x...:...........::.:.....x.........:.......x.::.....x.....x.:...:..x........:..:.x:...........x.:...x.--..x.x.....:.. 15M4I9M5I10M1D116M2D13M 128/163 78.5% 172/94230402 0.0% 12/163 7.4% 22133795 NA +3054 chr4 + 190214555 47859837 47859836 47859885 49 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAA chr4 - 94230402 1220213 1220212 1220261 93010142 93010141 93010190 49 ATCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAA .......:::x.............x....x........x.....:.:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 46639624 NA +3008 chr4 + 190214555 47859838 47859837 47859879 42 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAAC chr4 - 94230402 22746113 22746112 22746154 71484249 71484248 71484290 42 TCTCAAAAAAAAAAAAAAAAAGAACAACAAAAACAACCAGAC .....................:..x..x........x..:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 25113725 NA +3001 chr4 + 190214555 47859851 47859850 47859903 53 AAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAAGTAGAAATACCACATGA chr4 - 94230402 46081823 46081822 46081875 48148528 48148527 48148580 53 AATGAAAAAAAAAGAAAAAACAACCAAACAAAAAAAATATATACAACAAATAA ..x:.........:.........x............:..x.x.:.x..x..:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 1778028 NA +3022 chr4 + 190214555 47859853 47859852 47859892 40 AAAAAAAAAAAAAAAAAACAAACAAACAAAAAAAGTAGAA chr4 - 94230402 81661610 81661609 81661649 12568754 12568753 12568793 40 AAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAA .........x....x...................::.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -33801757 -60428645 +4586 chr4 + 190214555 47862840 47862839 47862951 112 GCTTACCTCTTTAGGGCACTGATTTTTGCAACAACTGAGGAGGTTCTTTTCATTTACATCAGCTGTGGTTATTTTTCTAAAAATAAGAAAG---------TTGATGACATTCAAACAAAAA chr4 - 94230402 25729838 25729837 25729958 68500445 68500444 68500565 121 GCTTACCTGTTTTGGACACTGGTTTTTGCAGGAAGTAAGAAGATCTTTTTCTTTTATATCTGCACTTGTTAGTTTTCTACAGAAAAAAAAAGATGTATTTGTGGTAAAATCCAAATTAaaa ........x...x..:.....:........:x..x.:..:..:.::.....x....:...x..xx.x....x.......x.:.x..:...:---------x..:.:.x..:....:x.... 91M9I21M 81/112 72.3% 121/94230402 0.0% 9/112 8.0% 22133002 NA +10502 chr4 + 190214555 47875081 47875080 47875327 247 TTCAACTAATTGTAATAAAATAAGACTTTTTTTTCAGTCT----ACTTACCTACATTCCACATACAGGCTTGTGATCTTACAGTGACATTTTATTCTAAGCATCTGAACACAAGGTGGACATTCTCCAGGGTGACATCGCAAAATACATGGGTGAAGACAACCTAGTGGCCGTGACTTGGAGCACCCTTCCTCACAATGAAGGCATTCTGGGCCAGCCTGAAAAACAGCATGGAAATAAATCACCTAAGTA chr4 - 94230402 25730745 25730744 25730991 68499412 68499411 68499658 247 TCCAATTAGGAGCATTTGAATGAAAAGTTGGGTTCAGTTCTGACACTTACAAGCATTCAATATACAGTACTGATAGTTTGCAGTGACACTTTATTTTAAGCATCTGGAGACAAGATGGACAATCCCCAGGATGACAGGGTAAAACACATCGGTGAGGACAGCCCAATGGCCGTGGCTTGGTACACTCCTCTTCACACCGCAAACATTCTGGACCTGCCT----AACAAAATAAAAACAAAGTACTAAAGCA .:...:..:xx.:.x.x:...:.:.xx..xxx......::----......xx:.....x.:......xx:..xx.x:..:........:......:..........:.x.....:......x..:.....:.....xx.:....:....x.....:....:..:.:........:.....x:...:.:..:.....x:.x.::........:..x....----....:x..::...:...x:..:x...:. 40M4I175M4D28M 172/243 70.8% 247/94230402 0.0% 8/243 3.3% 22144336 NA +7910 chr4 + 190214555 47878522 47878521 47878681 160 TACCTTGTTTTTTCCAGTGCAGCCATCAGTTTTGGTTACTTTGTGGCATTCTTTCATACATGTGTGATTCTGACAATCCAAGATTCTTCCACAAACTCTTTTACAAGAGTAGGGTCCTACAGCATGGCATGGTAGTGGACTCACCT-----TAAAAAATAAAGGA chr4 - 94230402 25733420 25733419 25733584 68496819 68496818 68496983 165 TACCTTCTTTCCATCTGCGTTACTGTTGATTTTAGTAACATGATGACATTCTTTCATACAAGTGTGATTCTGACAACTAAGAAGTCGCCCACAGAATCTTTTACATGAGTAGGGACCTGCAGAGTGACATGGTAGTGGACTAACCTGGAAGTTAAAAATAAAAGA ......x...::x:.x.:.:x:.::.:::....:..x..x.x:..:..............x...............::x.::.x..x:.....:.x.........x........x...:...x:..:..............x....-----.x.........:.. 146M5I14M 119/160 74.4% 165/94230402 0.0% 5/160 3.1% 22145102 NA +7780 chr4 + 190214555 47884300 47884299 47884456 157 CAAAAGTTTTTTGTTTTTTTTTTTTAATTGAAATTCTAATACTTACATAGGAATAGGAACTTGACATGGAGGACACGGTAATGCAGTCTGAATAAATGCTGGCTCAGAAGGCTGTTCCCAAGGGCCTGTAGGCTGGTGCTACAAATAAAATACATAA chr4 - 94230402 25740322 25740321 25740470 68489933 68489932 68490081 149 CAAAACTTTGTTTTCTTATTCACTTA--------TTTAATACTTACACTGGTATAGGAACCTCACAGGGTGGACATGGTAACGCAGTCTGAATAAAAGCTGGCTCAGATGGCTGTTCCCAAGGACCTGCGAATTGATGCTGAGAGCAAAGTATAAAA .....x...x..x.:..x..:x:...--------.:...........:x..x........:.x...x..x.....:.....:..............x...........x..............:....:::::..:....:x:.::...:..:.x.. 26M8D123M 114/149 76.5% 149/94230402 0.0% 8/149 5.4% 22143978 NA +7093 chr4 + 190214555 47885873 47885872 47886010 138 ACTCACCTGCATTGCTCCTTGCACTTGGGTGGTCTTGTGGTACGTTCTCGGCCACAGGGCACTGTCACCTTTGTATTGCCACAATTACACTTCACATCTACGGTTTCTGGGCAGGGATAGCAACTGCCTGAAAAAAAA chr4 - 94230402 25741956 25741955 25742093 68488310 68488309 68488447 138 ACTGACCTGCACAGCTGTTTACATTTTGGAGGCTTGATGGTGCGCTCTCTGCCACAGGGCACTTTAATAACAGTTTTTCCACAATTGCATTTCACATCTACAGTCTCTGGACATGGATTACAACTACCTAAAAATAAA ...x.......:x...x:..:..:..x..x..::.x:....:..:....x.............x.x.:xx:x..x..x........:..:...........:..:.....:..x....x:.....:...:....x... 138M 102/138 73.9% 138/94230402 0.0% 0/138 0.0% 22143917 NA +6795 chr4 + 190214555 47890609 47890608 47890712 104 TTACCTCTGTGACAGACAGATGGACACTTATGGTTTCTACATCCTAAAGTCCGTCCACAGTTTTGATCACAAGGTGGACAGTTTCCAGGGCAACACTGAAGAGA chr4 - 94230402 25745094 25745093 25745197 68485206 68485205 68485309 104 TTACCTCTGTGGCAGCCTGAAGGACATTTGTGATTTCTGCAACCTAGAGTCCGCCCACACACTTGATCACAAGGTGGACAGTTTCCAGGACAGCACTGTTGAAA ...........:...x.x..x.....:..:..:.....:..x....:......:.....xx:...........................:..:.....xx..:. 104M 85/104 81.7% 104/94230402 0.0% 0/104 0.0% 22145515 NA +8949 chr4 + 190214555 47894172 47894171 47894306 135 ACACAAACCTTTCTTCTACATTGATGCTTCTGACAGTCACGCATCTTAACACACTTAGTTTCACACAGATAAGGTTTATGACAAGGCATTCGTTTTGTATGCTTTCCACAGCGACAATGCTTTTCCACTTCCTGG chr4 - 94230402 25745553 25745552 25745687 68484716 68484715 68484850 135 ACACTTACCTTTCTTCTGCACTGGTGCTTTTGGCAATCACGAATTTTAGTACACTTTGTCTCACATAAATAAGGCTTATGACAGGGCATGCGTTTAGTGTGCTTCCCACAGCGACACTGTTTTTCAACTTCCTGG ....xx...........:..:..:.....:..:..:.....x..:...::......x..:.....:.:......:........:.....x.....x..:.....:...........x..:.....x......... 135M 110/135 81.5% 135/94230402 0.0% 0/135 0.0% 22148619 NA +9093 chr4 + 190214555 47896516 47896515 47896682 167 GACTAACTTGTCTACATGTTTCACAGGGACCTCGGTGACAACGCTGTGAACATCTATGGATTCCGCATTCAAGTACTTTGTCACAACTGTCTCCACAAGTTGGTACATCTTCTGTACAAGGCAAAGAAAACTCTAAAAACATACA-AAAAGTCAATGTTAATAATGAG chr4 - 94230402 25746561 25746560 25746728 68483675 68483674 68483842 168 GACCGACCTGTCGGCATGTTTCACAGGGACCTCGATGACAGCGCTGCAAACATTTATGGATGCCACACTCTAAAACTTTGTCACAGCTATCACCACAGGTGGGCACATCTTCTGTACAAGGCAACGTAAATTCTAGATGAAAAGAGAGAAGTACAGGCAAACAATAAG ...::..:....x:....................:.....:.....::.....:.......x..:..:..x.:x...........:..:..x.....:..x..:....................x.x...:....:.x:x.x.x.-.:....xx.x.:x..:...:.. 145M1I22M 128/167 76.6% 168/94230402 0.0% 1/167 0.6% 22149955 NA +15591 chr4 + 190214555 47897952 47897951 47899154 1203 AAAAACAAGTCTTACTTGATTTCTGACATGGACAGAACCTTTTCCCAGATCGAGGACATTCTCCACAAGCACCAACATGGCAAACTTGCTCACATGTGTGATTACCACATGGCAGTGTTTTTCCACATACCTAAAA---------------------TAAAATGCAATAAA------CACTAA--TGAAGGATTT------AAAAGTTAACAAAAAAA------GACTTCATA---CAAGACACAATCCA--TTTTTCAATCACAAATAAACAACTG---------CTTTACGTCCCTCATATTATTTTACTTT--------------ATATTTTATACAGGTGTCAT---------ACATATGTATAT---ATAGATACATATATACA--------TATGTATACACACACATATATTTC--------CTATGCACCAAAAAGT--------------------------------ATATTTTAAA-------AGTACAATACAGAAAAAAA--CTACATGCAGCTCCATATGGCCATTCACCAAGGAGTTCTAAGTGGCATTAAAACCATGCCAATTCTAGGAC---------------AAGCAA-----------CCTATAAAATCAATCTTACTTCCT--CAATTGGATTAATTCAAGAAGCAGGGAGGCGTGCTGGTTGAAGAGAGGGGAAAGAGAAGAAGGGGACAAGAGCTAGCAA------GAAAGAGTACAAATGTAGTGAATCCAAAACTCAACAAATAGCTGTTACTTTGAA----AAAAATTTTTCCTCTAATAATTAAAAATGATATTAAATTTAAAAGTAGTTTCTTAAAA-----CATGATATAATTCATCTGAGTTGCTATTCTTCCTTGCCTTTTA-------TCCAACTAAACCTGATTAGCCTTGCTGCTTTCTAGGTTGTCTATGCTT---------------------TCTGTACTCTTTAATACCC--ACCCCTCAAAATGCATA---------------------------------TAAACTTACTTGATCACAGTGCCATAGTGGACTTGCACAACTTCTTTCAGCTACTTTTTTGCCACAGACACACTTTTGTCTACTAACTCTTGGACAAGGCTGACAGCTTCCTAAAACCAGAATGATAAATTAGCACAGAAACATAAAAGCAATAAAGATTGCTTTGACTTTTG---------------CTTAA--AGTCAGA-------------AAAATCTAATGGGTATGGCCTTTTACCTGCATGACAAGGATTTTCACACTTATGTTGCCCACAAAGCAACTTCTGTCCACATGGCAGCTGACAAGACCATTCCTTGGCACTGCACCTACGAGGGATAGGTTTTGCTTTCTTACAGTAACAAGTAGTTGTGACCATCTTTGGACAAGGAGGGCAGGGACCTAGAATTCAGTAAAAGCAAAAAAAAAAAAAAAA chr4 - 94230402 25746995 25746994 25748384 68482019 68482018 68483408 1390 AAAAGAATGGCTTACTTGATTTTCCACATGGACAGGACCTTTTCCCAGAACGAGGACAGTCTCCACAGGGACCAGCATGACAAACTTGTTCACATGTGTGATTACCACAAGGTAAAGCTTTTCCACACACCTGGAAAAGTCAGAGAACTCAAGTGAATGCAACGTAACAAAATGTCACATTAAGATTAAGCAATCCAAGACAAAAACAAACAAACAAACGTATGGATGCCAGATGTCTGGATGGAATTAAGCTTTCTCAGTAATGAGGAGCTAATTGTAGCAATAACTTAACAAGCCTTCTGTTTGCTGAGTTTGCCAAATGAAACCAATCACCCCTACAGCAATCCTGACTGGAAGACCGCTGTACATTGAATGGTCAGTGATTCACAAAACAGCCTGAGCAGGCACAGGCCTGTACTGCGGTAGGCTACATGTAGCACAGACTTCAGGCCTGTGTAATGCATACATCCCATGGCCATAGTTTAAACTTAGCCAGTTAAAAGCAACAAAGGAGCCCACAGGCAGCTCC---------------------TACTTGATGACAGTGA--TTATGCCAAGCACAGGACCTTGCCTTTATCTAGAAGCACAGTGAGAAGTTCTCACAGGAACATCCTTCCTGTTTGGCAGTAGCAGTGATT-----AATAGAATTGTTTCCTTGT--------------------------AACAAAATCCTGCAACAGTTTGAATGACTA-AAACAGAGTAACACC----TGCTACGGACAGGGTCTGCTCAGCATGCTGAACATGGATCCCAGGAGCACTAAA--TGCTGCACAGCTTAGGATTCGCACCATCTAAAGGGTCGTAATATTAGTTAT-------ACTGTTCTCTCTTTCTGTACAGTGTTAGCTCAAATAAACATCATTTTAACTGATACTTTACAGACTCTTCATTATTATTCTCATACAGAAAAGTGTCTTTTCAATCTATAATACACCGAGTAATCAAGTTTTATAAAGATGTGAATAAGGTGAGGAAAGTCATCTTCATGAACATACCTGTTCACACTGCCACTGAGGACTTGCACAAAGCCTTTCTGCTGTCTGCCTTCCACAGATGCACCGCTGTTTACTGACACGTGGACAAGGCTGACAATCTCCTGTA--TGAAATCGTAAAGTTACACTGAG-CATAGGAATTAGATTTTTTGTATTCAACTTGGAAAATAGTAATACTTCTTAAGAAGTAAAACAACTGCTCTTTGGAAGCCTAAGGAGGCAGGC----TACCTGAGTGACAGGGATTCTCACAAGTATGCTGTCCACATAGCAACATTCGTCCACATGGCAGACGACATGACCACTCCTTGGCACTGCACCTTCGGGGCACTGGTTTAGCTTTCCTACAGTGACAGGATGTTGTGACCATCTTTGGGCAAGGTGGACAGGGACCT------------AAGCACAGAAAAAAAAGAAA ....:x.x.x............::x..........:.............x........x........:.x....:....:........:....................x..:.:x.:.........:....::..---------------------.:x..:.:..:...------..:...--.x...x.x.:------....::x......x...------..:x:..x.---.x:..::x...:x.--...:...:.x.::.:x.:x:..:..---------...x..:xx...:x.:..xx:.x.x...--------------..xx:::x.....xx:..x.---------..xxx....:..---..:.x:.xxx..x:...--------.:x.:.x:....x:.x.:..:.x.--------x:...:.x..x.:.x.--------------------------------...x......-------...xx..x:..:x...::.--.:...x........---------------------.x..x::..:..x.:.--::.......x:x:.....---------------.....x-----------.::.:.::.x..x:...x..x::.--..:.x.x.x.:...-----.::..::xx.:x.x..x..--------------------------:....:.x.:x....------...x..x..-...::x...:.xx..----:x.x..::.:..xxx:.:..:x.x.----:..x..xxx...:xx:.xx.:....--..x.::xx.::...::.x.x.:x:.x.xx..-----.:.:....x.x.:..-------:..:....::...x.:x.x:.-------::...x.....x.x...xxxx:..x.:....x:..::.x.::..xx..---------------------.:.x:.x...x......x.--.x:xx....:x.x:...---------------------------------.:...x...:..x.....x.....:x.x............xx:.....x...:::.x::.x.......::...:x:...:....:..x.x...............:::....:x.--:::...x:....x.x:...x..:-....::.::x.x.xxxx...:x..x.x:..x.---------------.....--...x.:.-------------:..::....x.:.xxx...----......x:.....:.....:.....xx....:..:.....x......x.::.............x:....x.....:.................x..:..x.:x.....x......:......:...:.xx.................:.....x..:.........------------.....x.:........:... 136M21I14M6I6M2I10M6I17M6I9M3I14M2I25M9I28M14I20M9I12M3I17M8I24M8I16M32I10M7I19M2I14M21D16M2D18M15I6M11I24M2I14M5D19M26D15M6I9M1D15M4D25M4I25M2D31M5I15M7D21M7I48M21I19M2I17M33I115M2D23M1D32M15I5M2I7M13I19M4D167M12D20M 746/1116 66.8% 1390/94230402 0.0% 361/1116 32.3% 22150957 NA +13454 chr4 + 190214555 47899363 47899362 47899564 202 AACTCACCTGGATGACAGAGGAGTAAACATTTATGGCCACAAGGAGGTTTAAATTCACGCTCACATACTTGGCCACATGAATGAGGCACAAGCCACGGATCTAAAGGTGGATCTTCTACTTTTCCACAATAGCAATAGTACCTACTAGGTGTTTCAGATCGTTTGTATTCAAACCTACATTTTGGACTACAAAGAAGAAGAA chr4 - 94230402 25748969 25748968 25749170 68481233 68481232 68481434 202 AATTTACCTGGATGACAAAGTAGCAAGCATTTATGCCCACAAGGAGGTTTGAATTCCTTCTCACATACTTGACCACAGGAATGAGGTACCAGCCATGGGTCCACTGTTGGATTCTCTACTTTTCCACAGTAACAGTAATACTTATTGGGAGTTTCAGACCGTTTGTATTCAAACCTACATTTTGGGCTATAAGAAGGAAAAA ..:.:............:..x..:..:........x..............:.....x:x............:.....x........:..x.....:..:..:.xx.x.....::..............:..:..:..:...:..:.:..x........:..........................:...:..::.:...:.. 202M 164/202 81.2% 202/94230402 0.0% 0/202 0.0% 22150394 NA +9488 chr4 + 190214555 47903134 47903133 47903337 204 CAAGAGCAAAACTCCATCTGAAAATAATAATAATAATCCAACTAATTA--GAAAAAGTTACCAAGGCCAGGGACAATCTTTCTTTCCAAAATCATCATCAGTCACAGAAGAT---ACAAGAAACTGGCTGTCTTTAGCCCACTTCTGGATACAGGGCATGTGAAATATACAGAAACATCCCGAACAGCTCCAAACCTAA--GACAAATGTA chr4 - 94230402 25750395 25750394 25750601 68479802 68479801 68480008 207 CAAGTGCACA----CATTTCACAACAAAAGTACCTATGTAAATATGTAACGAAGAACTCACCATGGCCACGGATAATCTTTCTTCCCAAAATCATCATCTGTCAAAGGAGATGACACAAGGAAAAGGCTGTCCTTGGCCCACTTTTGGATACACACCAGGTGAAATATACAGAAGCATCCACAACAGCTCCAGACCTAAAGAGCAGATGTA ....x...x.----...:.x.x..:..x.:..x:x..x:..x..xx..--...:..x.:....x.....x...:..........:..............x....x..:....---.....:..xx.......:..:........:........x:x..x...............:.....xx..........:......--::..:..... 10M4D34M2I62M3I84M2I10M 157/200 78.5% 207/94230402 0.0% 11/200 5.5% 22152739 NA +7869 chr4 + 190214555 47905227 47905226 47905348 122 AAAAACTTACTGCTTGGTTTCTCTTCACCGAAGCAATACAAATTAGGCATGTCATAGCCCCTGCTTGAAAAGCTTCATTTACATATTGTTTTGTTCGCTCTAATTCACGTGTATCTCCATCT chr4 - 94230402 25751670 25751669 25751791 68478612 68478611 68478733 122 AAGTACTTACAGCTTGGTTCCTTTTAACTGAAGCAATGCAGATCAGACATGTCATAGCCCCTGACTGAAAAGCTTCGTTCATGTACTGTCTTGTACGTTCCAGTTCACTTGCATCTCCATCT ..:x......x........:..:..x..:........:..:..:..:................x:...........:..:.::..:...:....x..:..:.:.....x..:.......... 122M 97/122 79.5% 122/94230402 0.0% 0/122 0.0% 22153557 NA +3297 chr4 + 190214555 47906004 47906003 47906066 63 CTATTATCTTCATTTTACAGATGAGAAAACTGAGGCACAAAAGAATTAACTTCAGTTTGCCTA chr4 - 94230402 10729197 10729196 10729257 83501146 83501145 83501206 61 CTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGT--AATTTGCCCA ....:.x..:..........:..:...............x.x:::....x.--.:......:. 51M2D10M 48/61 78.7% 61/94230402 0.0% 2/61 3.3% 37176807 NA +11225 chr4 + 190214555 47910797 47910796 47911017 221 AAAAGTCAAAATTTAAAAGATCAGTACCTGTCTGAGTAGTGTATGTTATAAACGTATTTGCAAGTATTTTTCCCTGTTTTCCTTCAAAATCTTCATCTCCTTCTTCAGATGAAGAGCTAAACTGTTCTTCAACAAGTTTTCTGGCTGCAGCTTGGTTAGCTTTCTTGATTTCTTCAAATTTTTTCTGAGACATTAGCTCTGTTTAAAAGAAAAAAGTTTCA chr4 - 94230402 25752134 25752133 25752354 68478049 68478048 68478269 221 AAAAGTCAGCACACAAAAAAAGTTTACCGGTTTGACTGGTGTAAATGGTAAATGTTTTCGCCAAAATCTTTCCTTGTTTTATTTCAGCATCTTCATCATCATCTTCTGACGAAGAACTAAACTGTTCTTCAGCCAGCTTTCTTGCTGCAGCCTGATTCGCCTTCTTAATTTCATCAAATTTCTTCTGTGAAGATAATTCTATTTAAAAGAAAAGACTGTCA ........:x.:x:....:.xxxx....x..:...x.:.....x:.x:....:..x..:..x.:x..:.....:......x:....:x.........x:.x.....x..:.....:...............:.x..:.....x........:..:..x..:.....:.....x........:.....x..x:x..::...:............:.x.x... 221M 164/221 74.2% 221/94230402 0.0% 0/221 0.0% 22158663 NA +3111 chr4 + 190214555 47912414 47912413 47912487 74 TCTCAACTGTCCAGGTAGAGAATGCTTGTTTTCTTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTGAGACGGAGT chr4 - 94230402 45363838 45363837 45363911 48866492 48866491 48866565 74 TCTCAATCTTTTTAAAAGGAAAACCTTGTTTTCTTTCTTGTGTTCCTCTTTTTTTTTTTTTTTTGGATCTGAGT ......::x.::x::x..::..xx............:.:x.x.:::...................::x.x.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 2548576 NA +85873 chr4 + 190214555 47936457 47936456 47937836 1380 TCCCTCAATACTTGAAAATTCTGTGTCAATAAGCGGTTTCAGAAATTTCTCAACCTTGGTTAATCTTTGTTTCAGTTTCTGCTGCATGGACTCATACTCAGCCAAGATTCGGGCAAACCTGGTTTGCAGGAGGTCTACTGACCCCTCCATTCGAGTAACCTTCTCTTCAAGATCTTTAGGATCACTGCCAGCATTTGCAATGTTTAGATCCAGTAGACCATCTTTCATTAAAATCTGCTTCCCTTTCTCTTCCAGCATAGTTTTGGCATCTGGGTACTCAGTTAGAGCTTCCATGAGGTCATCTTTTGAGAGACAGAACAGGTCTGAGTAGCCAATACTTTTAATATTGGCCGTTCTTCGATTGCCAGCTTTGCTCCCTTTAATGTTAAGAATGCTGATCTCACCGAAGTAGCTGCCATCGCTCAATACCACAAACTGAGTGACTCCATCATCTGCCACCACAGCGAGTTTGCCTTCCTTGATAATGTACATCTCTCGTCCGATATCCCCTTTCTTGCAAATATAATCTCCAGGACTGTAGACTTGGGGTTGCAATTTCAAGACCAACTCCACCAACAGACCAGCTTCACAATCAGCAAAAATGCGTACCTTTTTTAATGTGTCTAAGTGAACGTTGATGGCAATTTCTGCTCTTAGTTTATCAGGTAGATACTTTAAGACTTCTTTCTCATCAACTGTTTTTTTGTTGGTCCACAGGTAGTCAAACCATTTAATAACCCTCTTTTCCATATCTTTGCTTACATTTCGAAAATGCATATATTGCTTGATAGCATCAATTCTTGCTTGAAATTCTGCTCTGGCTGCATTCATGTTGGAAATCATAGAACCTATGTTACCAACGATGGTAGCAAAAATTAACACTCCAATTAGGAAATCAACCACCACAAAGACATACTCAGAATCCCTCACGGGAGGGGGTGTTTCACCAATGGTAGTCAAAGTCAGTGTAGACCAGTAAAGGCTGTATACGTATTTTCTAGCCAAACGGCCAAATTCAGGATCATTAATATCAGGGTAGACCCATGTATCATTTCCAAATCCAATAGCTTTAGAAATAGAGTAGAACACACATGCATTCCAGTGGATAATGATGACGATATACATAACAAGGTTGGAAATCCTGAAGATGTTTGGATAGTTTGTCCTTGTTTCTGTTCTCTGGAAGAACTCAAACATACGAGAGAACCGTAACAACCTGTTTAATCTAATTTCTGGATAGTTCCACCCTAACTTAAAATACAGCAAATCAGTTGGTATCAGTGACAGAACATCAAGTTTAAATTGCAAGTTGGATTTATATTTATTTATGAGTTTAAGTTCTTCCTTTACCAGCAGTCCTTGTTCTAGGTAACCTAAAAT chr4 - 94230402 25755017 25755016 25756396 68474007 68474006 68475386 1380 TTCTTCAAAGTCTAAGAATTCTTGCTCCATAACTGGCTTCAATATTTTCTCAATCTGTGTAAGTCTTTTTTTCAGTTTCTGTTGTGCAGCATCATACTCAGCTAACAACCTGGCAAACTTCGTTTGTAACCTGTCCATTGATCCTTCCATATAAGCAACCTTCTCTTCCAGGTCTTTAGGATCACTTCCTAAATTTGCAACTTCAATATCCAGCAATCCATCTTTCATGAGGATTTGTTTACCTTTCTCTTCCAGCATTGCCTTTGCATCAGGATACTCTGTTAAAGCCTCCATGAGATCATCTTTAGACAGACAGAACAGGTCTGAGTATCCAATACTTCTAATATTGGCCGTTCTTCGATTGCCAGCTTTGCTACCTTTGATATTAAGAATGCTGATTTCTCCAAAATAGCTGCCATCACTTAGGACCACAAATTGTGTCACTCCATCATCAGCGACTACTGCGAGTTTGCCTTCTTTGATAATGTACATTTCTCGTCCAATATCTCCTTTTCTGCAAATATAGTCTCCAGGACTGTACACTTGTGGCTGGAGTTTCAAAACAAGTTCAACCAACAGACCAGCTTCACAGTCTGCAAAAATCCGAACTTTTTTTAATGTTTCCAGGTGAACGTTGATTGCAATCTCTGCTCTTAGTTTGTCTGGCAGATACTTCAAGACTTCCCTTTCATCCACAGCCTTTTTGTTTGTCCAGAGATAGTCAAACCACTTTATAACTCTTTTTTCCATGTCTTTACTTACATTCCGAAAGTGCATGTACTGCTTGATAGCATCAATCTTGGCTTGAAACTCTGCCCTGGCAGCATTCATGTTGGAGATCATAGAGCCGACGTTACCAACGATGGTAGCAAAAATCAACACTCCAACCAAGAAGTCAACAACCACAAAGAAATACTCAGAATCTCGTACAGGAGGAGGTGTTTCACCAATAGTAGTCAGGGTCAGAGTGGACCAGTAGAGGCTATAGACGTACTTTCTGGTCAGACGGGCAAACTCAGGATGGGAGGTGTTGGGGTACACCCACGTGTCAGCCCCAAATCCAATCGCTTTTGAGATTGAGTAATACACACAGGCATTCCAGTGAATAATAATCACAATGTACATGACAAGGTTAGAGATCCTGAAGATATTTGGGTAGTTTGTTCTTGTTTCTGTTCGCTGGAAAAATTCAAACATCCGAGCTACTCGGAGCAGTCGGTTTATTCTCAATTCCGGGTAATTCAGTCCTAACTTAAAGTATAAGAGGTCAGTTGGTATGATTGACAGAAAATCTAATTTGAATTGTAGGGAGCTCTTGTATTTCTCTTTAAGCTTTTGTTCTTCTTTCACTAGAAGACCTTGTTCCAGGTAACCTAAAAT .:.:....x:::.:.:......xxx..x....x:..:....:x.x........:..xx..x.:.....x............:..::::.xx...........:..x.x:.x.......:.x.....:.:xxx...:.:...:..:.....x::..:............x..:..............x..x:x........:x.:x.x......:.:x...........x.::..:..:..x.................x.::..x.....x..:.....x....:...:........:........x..x....................x.........:..................................x.....:..:..............:..x..:..:...........:..:.:x........:..x..x...........x..x..:..x..............:..............:........:.....:.....::..........:..............x.....x..:..x.:......:..x.::..x....................:..x........x..x..:...........x..:.:............x.....:..............:..x..:........:........::.:.....x..x.::........x.....x..:...........:..x.....:..:........:.....:........:.....:.....:..:.................::.x........:.....:.....x..............:........:..x.:........................:..........::.:...:.....x..........x............:.x:..:.....:..............:.......::.....x..:........:.....:..x.....:.....:.:..:....x....:.......x:xx::.:.::.....x.....:..:...x::...........x.....x..:..x.....:x.......x...........:.....:..x..:..:.....:........:..:...........:.....:........:.............x......:..:........x....xx.x:..x.:..::.x.....x...x.x...:..:..:...x::...........:..:.:x.::...........x.x........x...x.:...:.....:.:.xx.xx:..:.....x.:.x.:..:..xx.......:..:..:..x..x........:.............. 1380M 1102/1380 79.9% 1380/94230402 0.0% 0/1380 0.0% 22181440 NA +3622 chr4 + 190214555 47937320 47937319 47937385 66 TGGTAGCAAAAATTAACACTCCAATTAGGAAATCAACCACCACAAAGACATACTCAGAATCCCTCA chr4 - 94230402 25758094 25758093 25758159 68472244 68472243 68472309 66 TGATAGCCAAAATCAGTGCTCCAACCAAGAAGTTAACAACCACAAAGAAACATTCAAAAGCCCTTA ..:....x.....:.:::......::.:...:.:...x..........x.:.:...:..x....:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 22179226 NA +3003 chr4 + 190214555 47938188 47938187 47938234 47 AAAAAAAAAGAAAAAAAGAAAAATTTTGTAAGTGCAAAAGTGAGAGT chr4 - 94230402 40592459 40592458 40592505 53637898 53637897 53637944 47 AAAAAAAAAGAAAAAAAGACAAATTCTGTATTTGCAGAAGTCAAAAT ...................x.....:....xx....:....x.:.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 7345729 NA +3319 chr4 + 190214555 47938899 47938898 47939005 107 ATTATTTGAAAGAAAAAAAGAAAGAAAGAAAGAGAGAGAGAGA----------------------------------GGGATGGAGGGAGGGAGGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAA chr4 - 94230402 71899214 71899213 71899354 22331049 22331048 22331189 141 ATTACTGCAATGACAAAAAGAAAAAGAAAAAGGAAAAAAAACAACTTAATGTGCAACTACCCAAACTTTTTTGGTAGGACATGGAGGGAGAGATGGCGAGGAGATGAAAAAGAAAGAAAATAGAAAAAGAGGGAAAAAAAA ....:.xx..x..x.........:.:.:....::.:.:.:.x.----------------------------------.:x..........:..x..x:..:.::x:.:.......::...x.:.:......::.:...:.. 43M34I64M 72/107 67.3% 141/94230402 0.0% 34/107 31.8% -23960315 -70270087 +3473 chr4 + 190214555 47938906 47938905 47939092 187 GAAAGAAAAAAAGAA------AGAAAGAAAGAGAGAG-AGAGAGGGATGGAGGGAGGGAGGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGGAAAGAAAGAAAAAGAAAAGTGTCTTTT chr4 - 94230402 33149016 33149015 33149202 61081201 61081200 61081387 187 GAAGGGAGGAAGGAACTGCTGGAAATGAAAAATAAATTAGTGCAGAATAGAGCAGGTGATGG---GAAAGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAAC--AGAAATAAGATTAGGCAAAGGAAATCTGAGGGGAG--AAGAAGGCATAAAAAGAGAATTAGAAAAGAGTTTTTT ...:.:.::..:...------::..x....:.x.:.x-..x.x:.:..:...x::.x..x..---.....x.:.xx..xxx....:....x.:..:x....x.:x..::...:....x--.....x..::xx..:x....:..:xxx..:..:.:--.....:.x:x...:.:....xx.......x..:.... 15M6I16M1I24M3D53M2D35M2D37M 114/180 63.3% 187/94230402 0.0% 14/180 7.8% 14789890 NA +3123 chr4 + 190214555 47938946 47938945 47939028 83 TGGAGGGAGGGAGGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAAAGAAGAAAGAAAG chr4 - 94230402 87442274 87442273 87442356 6788047 6788046 6788129 83 TGGGGGGGGGGGGGGGAGAAAAAAAAAAAAGGCAAAATACAAATAGATATACATTAATGAACAACAAGAAAAGGGAAAGGAAG ...:...:...:...:.::...:...:....:x..:.x.x...x.:.x.x.x.xx..x:..x..x:.....:::.....:... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -39503328 -54727074 +5952 chr4 + 190214555 47940723 47940722 47940909 187 AGCATGAAATTTTAAAATATTCA-----------AAACTGAAC--------ATATTTACCTGTCCTTGTTCGTACAAACATATCGATTAAATAGACTATGTCTGATACGTAATCCAAAATGAGCCAATATTCTAGGTAATCAGATTGAAGTTCATCAAAACATGCTCT--ATAAAAAAAGAAACACTTGTATAA--ATAAAAAAGAAATG chr4 - 94230402 25756771 25756770 25756980 68473423 68473422 68473632 210 AGTATAAGATTTTAAAACGAACATGTTAGTAGAAAGAATGAATTATCAAGTATACATACCTGTTCTTGTCCGTACAAACATGTCAGCAATATAGATGACATCAGAAACATAATCAACAATAAACCATACAGCTAAGTAGTCATTCTGAAGCTCATCAAAACAGGCTCTGAGTAGGAAAAGGAAAAAATAAGTTACCATGAAAAGAAAATG ..:..:.:.........::xx..-----------.:.x....:--------...:x.......:.....:...........:..:::x.x.....:x.::..x..x..:.....x.x...:.:...xxxxx...:...:...xx:.....:...........x.....--:..::.....:..x.xx.:x:.x.--..:....::..... 23M11I9M8I117M2I24M2I14M 130/187 69.5% 210/94230402 0.0% 23/187 12.3% 22183952 NA +7883 chr4 + 190214555 47942038 47942037 47942172 135 CACCTGGCAATAACCATTGTCCAGTTGTACATAACAGGTAATGTGATGCAAAACAGCCAGTTGTAATATGTGTTTCCCGAGGGATCAATAACCACAACTTCTTTCTTCTCCCT-AGCGGCAATTAGAAATAAAGGG chr4 - 94230402 25757073 25757072 25757208 68473195 68473194 68473330 136 CACCTAGCAATAATCATAGTCCAGTTGTACATGACAGGCATTGTGATGCAGAACAACCAGTTGTAATACATATTTCCTGCTGGATCAATGATGAAAATATCTTTCTTCTTCCTGAGTGATAGGTAGAGAAAAAGAG .....:.......:...x..............:.....:.x.........:....:............::.:.....:.xx........:.:x.x..:x..........:...-..:.::.:x....:.x....:. 113M1I22M 106/135 78.5% 136/94230402 0.0% 1/135 0.7% 22184965 NA +3037 chr4 + 190214555 47971142 47971141 47971200 59 ATACATATATATGTAAATATCTATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT chr4 - 94230402 19704280 19704279 19704338 74526065 74526064 74526123 59 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTT ...........:...x....:.:.:.x...x::..............x:.x.xx...:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 28266862 NA +3008 chr4 + 190214555 47971892 47971891 47971937 46 AAAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 37057558 37057557 37057603 57172800 57172799 57172845 46 AATAAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAA ..x..x............x.xx...............x........ 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 10914334 NA +3037 chr4 + 190214555 47971892 47971891 47971937 46 AAAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 64409953 64409952 64409998 29820405 29820404 29820450 46 AAAAACAAACAAACAAACAAAAAAAAACCACCACCACCAACAAAAA .....................x...x.x..x..x..x......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% -16438061 -77792341 +3088 chr4 + 190214555 47971892 47971891 47971965 74 AAAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAAAACCACTGTAATCTCCCAGTCCCTTCCCTA chr4 - 94230402 45213065 45213064 45213138 49017265 49017264 49017338 74 AACAACAAATCAACTCACAAGCTAACAACAACAACAAAAAAAAAAAACAACACACCCCACAAGTCTCTACCTTA ..x......:x...xx....:.x..............x..x.....x..x:::.x:.:x.x....:..x..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 2758827 NA +3187 chr4 + 190214555 47971893 47971892 47971942 50 AAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAAAACCACT chr4 - 94230402 4027217 4027216 4027266 90203137 90203136 90203186 50 AATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAACCTCT ..x.....x...x...x..x...................x.......x.. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 43944676 NA +3226 chr4 + 190214555 47971902 47971901 47971937 36 AAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 79230836 79230835 79230871 14999532 14999531 14999567 36 AAACAAACAAACAAACAATAACAACAACAACAAAAA ..................:................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -31258934 -62971468 +3584 chr4 + 190214555 47976155 47976154 47976265 111 ATATATATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATA-TATATACACATACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:.......:.....:...:.x:x.:....::..:x:x..x.::.:..:...xx.x::.:x..x.....:......x...x.....:-:.:.x....xx....... 93M1I18M 73/111 65.8% 112/94230402 0.0% 1/111 0.9% 43558812 NA +3277 chr4 + 190214555 47976157 47976156 47976272 116 ATATATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAAC ..x..x.:...........:...:.:.x:x.:.:.:::..:x.x:.x.::.:..:..:xx.x:...x..x.......:....x.:.x.....::-:...x.:..xx.:.....x.. 94M1D21M 72/115 62.6% 115/94230402 0.0% 1/115 0.9% 43558814 NA +3057 chr4 + 190214555 47976167 47976166 47976229 63 ATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.:.:...x.:.:.x...:.....:..:..x..::x.:....x......:.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 30455418 NA +3651 chr4 + 190214555 47976173 47976172 47976307 135 ACATACATATATATATACATAT-ATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATATATA-TATATACACATACATATA chr4 - 94230402 4417318 4417317 4417454 89812949 89812948 89813085 137 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ....:.x.:.x:...x.x.:x.-.x..x..x.:.......:.....:...:.x:x.:....::..:x:x..x.::.:..:..:xx.x:...x..x.......:....x.:.x.....:-:.:.x....xx....... 22M1I95M1I18M 87/135 64.4% 137/94230402 0.0% 2/135 1.5% 43558855 NA +3567 chr4 + 190214555 47976174 47976173 47976277 104 CATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:.....x:...:.......:.::x.x::..:x:..:.:..:..:.x:..:.::x::....:.:x...:.....x....:.x:...x.x.:.:.:.::.... 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% -25144932 -69085470 +3022 chr4 + 190214555 47976195 47976194 47976286 92 ATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x.:x.:.......:.:.....:...x:x.:...::...:x:x:.x.::.:..:...xx.x::.:x..x.....:......x...x..... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 43558852 NA +3080 chr4 + 190214555 47976215 47976214 47976330 116 ACATACATATATATATACATAT-ATATGTATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATAT chr4 - 94230402 4417318 4417317 4417434 89812969 89812968 89813085 117 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ....:.x.:.x:...x.x.:x.-.x..x..x.:...........:...:.:.x:x.:.:.:::..:x.x:.x.::.:..:..:xx.x:...x..x.......:....x.:.x..... 22M1I94M 72/116 62.1% 117/94230402 0.0% 1/116 0.9% 43558897 NA +3698 chr4 + 190214555 47976216 47976215 47976319 104 CATACATATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:.....x:...:.......:.::x.x::..:x:....:.:::...x:..:.::x:.....:..x:..:.....x....:.x:...x.x.:.:.:.::.... 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% -25144890 -69085512 +3044 chr4 + 190214555 47976222 47976221 47976288 67 TATATATATACATATATATGTATATATATATACACATACATATATATATACATATATATGTATATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:.............x.:.....::x....:.::x:.....:..:..:::..:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% -190816 -94039586 +3300 chr4 + 190214555 47976237 47976236 47976349 113 ATATGTATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATATATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x.:x.:.......:.....:...:.x:x.:....::..:x:x..x.::.:..:...xx.x::.:x..x.....:......x...x.....::-:.:.x....xx.:..... 94M1D18M 71/112 63.4% 112/94230402 0.0% 1/112 0.9% 43558894 NA +3057 chr4 + 190214555 47976249 47976248 47976311 63 ATATACACATACATATATATATACATATATATGTATATATATATATACACATACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.:.:...x.:.:.x...:.....:..:..x..::x.:....x......:.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 30455500 NA +3689 chr4 + 190214555 47976256 47976255 47976359 104 CATACATATATATATACATATATATGTATATATATATATACACATACATATATATATACATATATATGTATATATATATATACACATATATATATATATGTATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...:.....x:...:.......:.::x.x::..:x:..:.:..:..:.x:..:.::x::....:.:x...:.....x...::.x..:.x.x.:.:.:....... 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% -25144850 -69085552 +3264 chr4 + 190214555 47983589 47983588 47983642 54 CAAAAACAACAACAACAAAAAAAAAGTAAAAGAAAAAGAAAAAGAAAAAGAGAA chr4 - 94230402 12139749 12139748 12139802 82090601 82090600 82090654 54 CAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAA ...x....:.............:.:.x....x.:..:.........::.:.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 35843840 NA +3604 chr4 + 190214555 47984602 47984601 47984687 86 GGCATTGAGACTCCATCTC---AAAAAAACAA-ACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 60979320 60979319 60979409 33250994 33250993 33251083 90 GGCATTAATATTCTTTTCTTGTAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ......:.x.:..:x.:::---.......:..-.x.......:.....xxx........:.:.....:.............x.x.x.x.. 19M3I10M1I57M 65/86 75.6% 90/94230402 0.0% 4/86 4.7% -12994718 -81235684 +3602 chr4 + 190214555 47984621 47984620 47984682 62 AAAAAAACAAACAAACAAATAAAAAAAATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGG-AAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:......:.x.....::-....::...........................::..x.x.. 19M1D42M 50/61 82.0% 61/94230402 0.0% 1/61 1.6% -22722958 -71507444 +3209 chr4 + 190214555 48002670 48002669 48002723 54 GGTGTCAGACATGCAAAAAAAAAAAAAAAACAAAAACAAAAAACCCTGAAAAGA chr4 - 94230402 75231108 75231107 75231161 18999242 18999241 18999295 54 GATATCAGAGAAAAAAAAAAAAAAGAACAACAACAACAAAAAACCCTAAAAAAA .:.:.....x.x:x..........:..x.....x.............:....:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -27228438 -67001964 +3238 chr4 + 190214555 48012715 48012714 48012768 54 AAAAAGACCAAAACAACAATAAAAAACAGACAACAACAACAAAAAACAGTTAGG chr4 - 94230402 78376854 78376853 78376907 15853496 15853495 15853549 54 AAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAG .....:.xx........x.:.:......:.x..................:x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -30364139 -63866263 +3056 chr4 + 190214555 48017843 48017842 48017893 51 ATATATATAGTTCCCTTACACATATATATATATATATATGTATATACATAT chr4 - 94230402 84365848 84365847 84365898 9864505 9864504 9864555 51 ATGTATATAATTCCCATCCACACACATGCATATATGTATACATACACATAT ..:......:.....x.x....:.:..::......:...::...:...... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -36348005 -57882397 +3256 chr4 + 190214555 48019109 48019108 48019175 67 CTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGAATACAGGCACATGCCACCATG chr4 - 94230402 18197142 18197141 18197206 76033197 76033196 76033261 65 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ...........::x...x.xx.x........:............:.x....x.::..--....::.. 57M2D8M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 29821967 NA +8368 chr4 + 190214555 48025052 48025051 48025345 294 CTTTCCTTTTTTCCAGGAT-ATGTGCTGTCTCTGGTCT---GTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTGAATTACAGCATAAACAACTTGAGCATTTCAGCAAATGTAGAAAACAAATACAGTCTTTATGTGGGCTTGGTACTGGCAGTAAGCTCAAGTATTTTTATTGGCTCCAGCTTCATACTGAAAAAGAAGGGCCTCTTGCAACTGGCCAGCAAGGGCTTTACTAGAGCTGGTAAGAAACAC chr4 - 94230402 25771771 25771770 25772067 68458336 68458335 68458632 297 CTTTCCCTGCTTCCTCCCTCAGGTGCTGTGTTTGGGCTTATGCCATCACATCTACCAGGCCTGGGGTCAGGCCTTCAGCAGGGC-CAAATTCCTCCTTCTCCCCTCACCCCTATGGACGGGACTTTTAATGAAACAAGCCTGAGGCCTTCTACACCTGCAGGAAGCCAGTACCAGCTCTACATTGGCTTGGCTCTGGCAGTCAGTTCCAGCATCTTCATTGGATCCAGCTTCATCTTGAAGAAAAAGGGCCTCCTGAAGCTGGCCACCAAAGGGGCTCCCCGTGCTGGTAAGCAGTAC ......:.x:....xxxx.-.x.......x.:...x..---.:.xxx..x:..x......:...x..x..::.x:x.:::x.x.-..:x.x.:xx.......:x.xx:.:x:.:....xx..x..x:.:::x..xx.:.:....xx:...x:..xx..:..:..:.x.:...x:x..:..::.x.......:x........x..:..x..:..:..:.....x...........x:....:..:.........:..x.:.......x...:..xx:.x.:x.x.........x.::.. 19M1I18M3I43M1D213M 187/293 63.8% 297/94230402 0.0% 5/293 1.7% 22253281 NA +3809 chr4 + 190214555 48025219 48025218 48025337 119 CAGTCTTTATGTGGGCTTGGTACTGGCAGTAAGCTCAAGTATTTTTATTGGCTCCAGCTTCATACTGAAAAAGAAGGGCCTCTTGCAACTGGCCAGCAAGGGCTTTACTAGAGCTGGTA chr4 - 94230402 92204389 92204388 92204507 2025896 2025895 2026014 119 CGGCTTTTACGTGGGGCTGGGGCTGGCTTTGGCTTCCAGCGCCTTCATCGGGGGCAGCTTCATCCTGAAGAAGAAGGGGCTGCTCCGGCTGTGCGGCCGCGGTCGCCCCAGGGCAGGTA .:.::....:.....x:...x:.....xx.::x:..x..::::..:..:..xxx.........x.....:........x..x:.x.::...xx.:..x:x..::x:x.:..:..x.... 119M 73/119 61.3% 119/94230402 0.0% 0/119 0.0% -44179170 -50051232 +4996 chr4 + 190214555 48030114 48030113 48030182 69 TTTTAGGACAAGGTGGACATTCTTACCTGAAGGAATGGCTCTGGTGGGTAGGATTGCTGTCAAGTAAGT chr4 - 94230402 25772960 25772959 25773028 68457375 68457374 68457443 69 TTCCAGGACAGGGTGGATATTCTTACTTGAAGGAATGGCTTTGGTGGGCTGGACTACTTTCAAGTAAGT ..::......:......:........:.............:.......:x...:.:..x.......... 69M 58/69 84.1% 69/94230402 0.0% 0/69 0.0% 22257154 NA +7102 chr4 + 190214555 48032957 48032956 48033090 134 CCATTTTTTATATCAATATCTCTGCTTGCTTTCTAGTGGGAGCAGGAGAGGCTGCAAATTTTGCTGCTTATGCTTTTGCACCTGCCACCTTGGTCACCCCTCTGGGTGCTTTGAGTGTTCTCATAAGGTATGTG chr4 - 94230402 25773410 25773409 25773542 68456861 68456860 68456993 133 CCATTGTGTTCATCCAAATGT-TCTTTCTTCTGCAGTGGGATTGGGAGAAGCTGCAAACTTTGCTGCCTATGCCTTTGCACCAGCAACCTTAGTTACCCCTTTGGGTGCGCTGAGTGTTCTCATAAGGTTAGTG .....x.x.x:...x.x..x.-.x:..x:.:.x:.......x::.....:........:........:.....:........x..x.....:..:......:.......x:..................xx... 21M1D112M 103/133 77.4% 133/94230402 0.0% 1/133 0.8% 22259547 NA +6184 chr4 + 190214555 48032980 48032979 48033086 107 GCTTGCTTTCTAGTGGGAGCAGGAGAGGCTGCAAATTTTGCTGCTTATGCTTTTGCACCTGCCACCTTGGTCACCCCTCTGGGTGCTTTGAGTGTTCTCATAAGGTA chr4 - 94230402 92205574 92205573 92205680 2024723 2024722 2024829 107 GTTTCTCTTGCAGTGGGAATTGGAGAAGCAGCAAATTTTGCTGCCTACGCCTTTGCCCCTGCAACGCTGGTAACTCCGCTGGGTGCTCTGAGTGTCCTCGTTAGGTA .:..x::..x:.......::x.....:..x..............:..:..:.....x.....x..x:....x..:..x.........:.......:...:.x..... 107M 82/107 76.6% 107/94230402 0.0% 0/107 0.0% -44172594 -50057808 +3840 chr4 + 190214555 48034217 48034216 48034313 97 TCCAACCCATGGCCCATGGGCTGCATGTGGCCCAGGACGGCTTGGAATGTGGCCCAACATAAATTTGTAAACTGTCTTAAAATATTATGAGTTTTTT chr4 - 94230402 75796546 75796545 75796639 18433764 18433763 18433857 94 TCCAACCCAGGGCCCACGAGCTGCATGCAGCCCTAGACAGCCAGTAATGTGACCC--CACAAGGTCACACACT-TCTAGCATTACTATGTGATTTTT .........x......:.:........::....x:...:..:x.x......:...--..:..:x.:::.x...-...x:x.x..:....x.x..... 55M2D16M1D23M 68/94 72.3% 94/94230402 0.0% 3/94 3.2% -27762329 -66468073 +27295 chr4 + 190214555 48034857 48034856 48036186 1330 TTTTAATTTTTTCTCTCCCAACAGTGCAATATTATCTTCCTACTTTTTAAACGAGCACTTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGGTCAACTGTGATGGTTATCCATGCCCCACAAGAAGAGGAAGTCACATCTTTGCATGAAATGGAAATGAAATTGAGAGACCCAGGTCTGTG-ATTCAACCTAA-------------AGAACCACT-CAAATTCTGCTCCACTTTCTCTCCTCACCAAATAGTATCTGTAAT------------AATATTGTAATAAG------CTTTCTACATTGTGGGCCGCATTGTG--GGTTGTG-------------------------------AGACACA-GTGAGGTTTGATTAT------TATTTCTCCTGAAAAGATG-----------------------------------GCAGAACTTATT------------TTTGTGTTCATGCTTCCCCTGTTACACAATGAAAGGGAGAGGTGGGGATGGTAGAGGCAAAAGACATATATTCAAAAT----CAAATCTTT-------GCCACTCTCTTCC---TCTGAAAATA---------AAAAGTTAATCTGATAATATTCGC--------CCTAGCTC------------------------------------------ATAGTGGTATTGGTGAGATTTAAATGA-----TATGTTTG------TGAAAATCCTT-----------TGTAAAATA-----------------------------------TTGAGAACT-ATGCAATAGAATGTT---------GTTTTTAATTTGA--------------TCTCACTTCTATTTC--TAAAATACCTATGCTCTTAAACTCAT-GACTAACAAGATTTCAGAAAGGTATAATCCTGTGAGCATTTTCT-----AAAGTCAAAT------TCTTTTCTCCTTCTAACAGGGTTTATTTCCTTTGCTGTGATCATAACTGTGATCTCCTTGGTGCTGATTTTGATTGTGGCTCCCAAGAAAGGACAGACCAATATATTGGTTTATATTTCAATCTGTTCCTTGATTGGAGCGTTTTCAGTTTCTTCTGTGAAAGGCCTGGGAATTGCCATTAAGGAGCTGATAGAATGGAAGCCAGTTTACAAACATCCGCTGGTCTTTGTTTTGCTGGCTGTACTTGTGCTTTCAGTAACTACACAGATTAACTATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTATTATGTATTCTTCACATCCATGGTAGTGACTTGCTCTGCCATCTTATTCCAAGAGTGGTATGGCATGACAGCTGGA-GATATCATTGGGACCCTGAGTGGATTCTTCACTATTATCATTGGCATCTTCCTTCTACATGCTTTTAAAAATACTGACATTACTTGGAGTGAGCTTACATCCACTGCTAAGAAAGAAGCCGTCTCTCTGAATGTCA---ATGAAAACAATTATGTTTTACTAGAGAACTTGGAGTGTTCAGCCCCAGGATACAATGATGACGTTACCTTGTTTAGTAGAACTGATGACTGAAGTCTCTAGAAACA chr4 - 94230402 25774645 25774644 25776239 68454164 68454163 68455758 1595 TTTTATTTCTGTTTTGTCAAACAGTGCTATATTGTCATCCTACTTTCTGAAGGAGAAGCTGAATATTCATGGCAAGTTGGGCTGTGTTCTCTGTGTTTTGGGTTCTACAGTCATGGTTATCCATGCCCCAGAGGAGGAGGAGATCACCTCACTGGATGAGATGGAAATAAAACTGCAAGATCCAGGTCTGTACGCTTAACCTGACATATGTCATGGCAGACACATGACAGATTTTGAT--GTGTTCTCACTTCACTGGTTA-TGTTTGTGAGTGAGTGGATTGGGATATC-TAATCAGAATGTCCTGGCTGCA----GAGCTGTCTTGAGCTGATTGTGCCAGGAGCCCAGAATCCCTTAATACATGCATGAGCACATATGGCTTCTGCACATGTACTGTATTTCTC----AAAGATGCAGGATTAAAAGCAGTTCATCTTACATGGCTTCTTGCAGA--TTATTCAAGTAAGAAATTATGTACTGATTTTTCCTGCCTTCCAGCCCGTTGAGGAGTTCTAAGGCTCTATAAACCATGTTACCTCCACTTAAAATAAATCACAGCTTTAAATAAGGCTACTTTCAACCAGTTCTTAACTTACTTCATTTGAAATGCTGTTCAGTTCTAAGTCCCAATTACTACCTAGCTCTAAGTAAGCAGGTGCTCATACTAATTCAAACAAATATCCTTGATGATAGCCTTGGGTACACTTCAAAGAGAATGTATGTTTGAGAAGTTGAAGACTTTCATATGGAGGAGTGTAGCATAGGACCAAAAGAGCTAAATTCAGATCAGCTCATAATTTAAAAGCTGATACAATTAAAAATTAAACATACAGTTGGCATTTTAAAAACAAAACATGTATCCTTTGTTTATTTCAATGCAATGAGTTTGTGCTTCAGTTCTTCGAGAAATTGAATT----GAAGTTGAACAACTTTTAGCGTGTGTTTGAACACAGTCTGATATTTCATCTTTCCTCTTTTATATAGCGTTTGTTGCATTTGCTGTTCTCCTAATGTCTGTTGCCCTCGTGCTGATTTTTGTTGTGGCTCCACGGAGAGGTCAAACAAATATACTGATCTACATTTTAATTTGCTCACTCATTGGTGCCTTCTCTGTCTCATCTGTCAAAGGCCTGGGCATTGCCATTAAAGAAATGTTGGAACGGAAGCCAGTTTATCGACATCCCCTGGTTTATATTTTGGTGGGAATCCTATTGCTCTCAGTCAGCACCCAGATCAATTATCTCAACAAAGCACTGGACACATTTAACACATCTCTAGTGACACCTATTTATTACGTGTGTTTCACCATGACGGTGGTGACATGCTCCATCATCCTGTTCAAGGAATGGAGTAGTATGG-ACCTGGATGACATCACTGGGACCCTCAGCGGATTCTGCAGTATAATAATAGGAATTTTTCTATTACATGCTTTCAAAAATACTGATATCACCTGGAGTCAGTTGATGTCCAGTGTTGCAAAAGAATCATCATTGCCGCATTGCGAGTATGAAACCTCTCACACTTTACTGGAGAGCATGGAAGACCCAGCTGTGATATATGGGGAAGATAATGTTTTATTCAG-----CCAATGA---AATTCTCAAGTGACA .....x..:.x.:.:x:.x........x.....:..x.........:.:..x...x.x:....:........x..:x.:.....::.x:.xx..:.x.....x..x..x..x..................x.:..:.....::....x..x:..x....:........:...:..x:...:..........:-::.:.....:.-------------...xx..:x-..:...:..x.--::x.....x.:....:::x..-.:.:...:.x------------:....:-....x..------..xx..:..----.:..:.:x...x.--.:.....-------------------------------:::....-:..:xx.:..xx:..------........----.......-----------------------------------.....--.....------------.x...::.x..x:....:x:x..x..xxx:.xx::....xxx.::..x.xxxx:.:x..x:xx..x.x:.:.:.....----..x.x....-------..:...:..xx..---...x..xx..---------...x.:.:x..x.x.xxx.x..x.--------........------------------------------------------..::.:.:x....xx.x.:..x..x..-----........------....:.:::.:-----------....:x...-----------------------------------..:.:.:..-..:....x:..x:..---------...xx:.x...:.--------------..::x:x.:......--.:x...:xx.x..:x...x.::..x.-..xx..:x::...----:...x.:x.xxx..x.x...:.x.x:.-----.x....x:..------.....:...:..:xx.:..x....:..x.x........xx..x...:xx:x:.:x..:.x...........x:..........xx:..:...x..:..x......:..:.:..:....:...:..:..x:.x.....x..x..:..x..:..x.....x...........x...........:..:x..x.:...:.............:x:......x.....:.x.:.....x...xx:.x..xx....:.....x.x:..x.....:..:...........:...........x.....:..x.....x........:........:..:.x:.....xx:x.:...:.....x.....:::....:.:...x.:..:...x:.:.:...:-.x.....-..:....:.........x..:.......x..x...x..x..x..x..:..:..x:..........:...........:..:..:......x..:.x.::....x..:.:x:......x.xx:x.:x.:.x..xx.:---......x.xx.:.:::......:....:.x....:x:::....:x:::x...:::x..x..::x.:::..:..:..-----.::....---..x....x..x:... 192M1I11M13I9M1I11M2D21M1D10M12I6M1D7M6I9M4D13M2I7M31I7M1I15M6I8M4D7M35I5M2D5M12I78M4I9M7I13M3I10M9I24M8I8M42I27M5I8M6I11M11I9M35I9M1I15M9I13M14I15M2I26M1I13M4D27M5I10M6I394M1D7M1I136M3I76M5D7M3D15M 886/1303 68.0% 1595/94230402 0.0% 319/1303 24.5% 22260212 NA +3146 chr4 + 190214555 48041515 48041514 48041615 101 GAAATTGTGCC--ATTGTACTCCAGC-------CTGGGCAACAAGAGTGAAACTCCATTCTCCAA--AAAACAAAAGAAACCAAAAAAAAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 94076827 94076826 94076934 153469 153468 153576 108 GAAAATGTGTTTTATTATAATCCAGTAAAAAGGCTGGTCAAAAAAAAAAAA----TAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAA ....x....::--...:..x.....:-------....x...x..:.:x:..----:.x.:.x..:--.x.....x.:x...x..........................x... 11M2I13M7I18M4D10M2I45M 74/97 76.3% 108/94230402 0.0% 15/97 15.5% -46035312 -48195090 +3248 chr4 + 190214555 48050471 48050470 48050612 142 CAACAGAGTGAGACCTTGTCTGAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAGAAAAGAAAAAAAAATAAAGAAGAAAAGAAAAGATAAGATAAGATGAT-GGACTGCATGGAAAATGGCCAGAAAGCAAGAGGGGAA chr4 - 94230402 62511286 62511285 62511420 31718983 31718982 31719117 135 CAATAGAAGGA---CTCTTCTCTAAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCT-----GACAGCAACTTGAAAGAGAGAGCAGAA ...:...:x..---..:x...xx....:.x...::...:....:....x.:..::x..x.:xx.:x.......:....:...::x.:...:x....:.::.x.:.-:.:..-----..x.::::.:x.....x:....x:... 11M3D91M1I5M5D27M 84/134 62.7% 135/94230402 0.0% 9/134 6.7% -14460815 -79769587 +3097 chr4 + 190214555 48060147 48060146 48060265 119 AAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATGCAATAAGAAGAGCTAACTTCTCGGTGATTATACATATATATATACACATACATACATACATATAT--ATATATAAT chr4 - 94230402 38405728 38405727 38405848 55824555 55824554 55824675 121 AATAAAGTCAGAAGATACAATAACATGAGGTCAGAGTTTCAAAAGTCATAGAAAGGAATGAATTCACACTGAATATTCATATAAATAACCACGTATATGTGTATATATATTCATATATAAT ..x....x..:.::.x:xx..x....:.x.x:.:..xxx:x..x.:x...::...::x.:.x...x.:x...x...x......x...xx...:..:..:::..:......--......... 110M2I9M 75/119 63.0% 121/94230402 0.0% 2/119 1.7% 9654419 NA +3083 chr4 + 190214555 48063816 48063815 48063875 60 ATTCTAGAATGTTTTCTTTCTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTT chr4 - 94230402 14160031 14160030 14160090 80070313 80070312 80070372 60 ACTTCAAAAGGTTTTGTTTACTTCCTTGCCATTCTCATTATTTTTCTTTTTCTTTTTCTT .:.::.:..x.....x...x:...:..x.:x....:x..x.................... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 33903785 NA +3486 chr4 + 190214555 48067633 48067632 48067719 87 CCGGTCACCAGGTTTCCGCAATCTCTGTGACAGCCCGCAGCAGCTCGGCAAATGTAGGGCGGCCTTCAGGTTTCTGGAAAAGGGAAG chr4 - 94230402 25781687 25781686 25781773 68448630 68448629 68448716 87 CCAGTTATCCCATCTCCATTATATCTGTGAGGGTTTCTACTAATTCTGCAAAAGTAGGACGTCCTTCAGGCTTCTGGAAAGAAAAAG ..:..:.:.xx:.:...::x..x.......x:.:::x:.x:.::..x.....x.....:..x........:.........::::... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 22285946 NA +7236 chr4 + 190214555 48071491 48071490 48071724 234 TTCATAGG---AAAGTAACATATGCTTACCTCATGCCAGCAGCTGTACATGACTTCATATATGGACATTGGTGCCAGGTGAGGGCGATATAGCCTGAAGCCTTCAG--AA--ATAGCTTCCACGACTTGCAAATTTGACTTATTTTCAAAAGGCATTTTTCCTTCTGTAAAAACTTCCCACATTAAAACTCCTGCAAACAAAAATGCAGGAAAACAAGGGGTTAG-AGAGAAATGATTGCTT chr4 - 94230402 25803415 25803414 25803650 68426753 68426752 68426988 236 TTCAAAGGCAAAAATAAAAATGTGCTTACCTCCTGCCAGCACATCATCATGACTTCATATACTTGCTTGCAGGCTAGTTTGGGGCGGTACAAAC-GATGCCCTTGGCTAACCATAGTTACCACATCAT---AGTTGGAACTTTTTTCGAAGGGCATTTTTCCTTCTGTAAACACTTCCCACATTAAAACACCT--AAAAAAAAAATTAAATAAACATTAAGTAAGCAAACAAATAATTTCTT ....x...---...xx..x..:..........x........xx.xxx..............:xx:.x.xx:x..:..x.x:.....:..:.:x.-..x...:.::.--..--....:.x....:x.x.---.:..x..x:.x.....:..:....................x.................x...--...x.....xx:.::x.....xx::..x..-.:.x....:...x... 8M3I83M1D11M2I2M2I16M3D62M2D30M1I16M 166/228 72.8% 236/94230402 0.0% 14/228 6.1% 22268076 NA +8672 chr4 + 190214555 48071492 48071491 48071685 194 TCATAGGAAAGTAACATATGCTTACCTCATGCCAGCAGCTGTACATGACTTCATATATGGACATTGGTGCCAGGTGAGGGCGATATAGCCTGAAGCCTTCAGAAATAGCTTCCACGACTTGCAAATTTGACTTATTTTCAAAAGGCATTTTTCCTTCTGTAAAAACTTCCCACATTAAAACTCCTGCAAACAAA chr4 - 94230402 25782291 25782290 25782484 68447919 68447918 68448112 194 TCACAAGAAAGAAGGAGCAACAAACCTCATGCCAGCAGCTGTACATGACTTTGTACACTGTGTGTGACGCCAAATGCGGTCGATAAAGTCGGTTACCTGCAGAAATCTCACGGACAACTTCGTAATTTGATTTACTTTCAAAAGGCATTTTGCCTTCTGTGAAAACTTCCCACATCAGTACACCTAGAAATGAA ...:.:.....x.:x.xxx:.xx............................::..:.:x.xxxx..::....::..x..x.....x..:.x.xx:...x.......xx.x:xx..:....xxx.......:...:................x........:..............:.:x..x...:x...::.. 194M 139/194 71.6% 194/94230402 0.0% 0/194 0.0% 22289201 NA +9544 chr4 + 190214555 48073928 48073927 48074057 130 CACTCACCAAATGACCAGACATCAGATTTACTGCTGTACTTATTGAAAAGAAAAACTTCAGGAGGGGACCACTTGATTGGGAACTTGGCTCCAAAAGAACTGACATACTCATCATCCAAAACGTACCTAA chr4 - 94230402 25782901 25782900 25783030 68447373 68447372 68447502 130 CACTCACCAAATGACCAGATGTCAGATTTACTGCTGTACTTTTTGAAATGAAAGACTTCAGGAGATGACCACTTGATTGGAAACTTGGCACCTGAAGAGCTGACATATTCATCATCAATGACGTATCTAA ...................::....................x......x....:..........:x..............:........x..x:....:........:........x.x:.....:.... 130M 113/130 86.9% 130/94230402 0.0% 0/130 0.0% 22291027 NA +6013 chr4 + 190214555 48073930 48073929 48074057 128 CTCACCAAATGACCAGACATCAGATTTACTGCTGTACTTATTGAAAAGAAAAACTTCAGGAGGGGACCACTTGATTGGGAACTTGGCTCCAAAAGAACTGACATACTCATCATCCAAAACGTACCTAA chr4 - 94230402 25803946 25803945 25804073 68426330 68426329 68426457 128 CTTACCGAACGACCAGACATCTGACTTGCTGCTGAATCGACTGTAATTAAAAACTTCTGGCGGGCACCACTTCACAGGAAATTTAGCCCCTGAGGAGCTTGTGTATTGATCATCAAGGACATACCTAA ..:...:..:...........x..:..:......x.::x.:..x..xx.........x..x...x.......x.:x..:..:..:..:..x:.:..:..x:::..:.x......x.::..:....... 128M 90/128 70.3% 128/94230402 0.0% 0/128 0.0% 22269984 NA +3870 chr4 + 190214555 48076399 48076398 48076498 100 TACCTTGTCATTCCAAAGTCTGAAATTTTTACTATGCATGTTGAACTGACCAAACAATTCCTTGCCGCCTATGGAAAGAAGAAAAGAATCCAAGTTTGAA chr4 - 94230402 25785160 25785159 25785256 68445147 68445146 68445243 97 TACCTTGCCATGCCAAAGTCGGATACTTTAACAGTGTGTTCAGCATTGACTAAGCAGTTCCTTGCAGCCTAGGAGAAATGGGAAAA---CCATATCTGAA .......:...x........x..x.:...x..x:..::.x:x.x.:....:..:..:........x.....x.::..:x:.:...:---...x:.:.... 86M3D11M 67/97 69.1% 97/94230402 0.0% 3/97 3.1% 22291239 NA +12476 chr4 + 190214555 48079900 48079899 48080136 237 CACCATACTTACCAAATCCCTATGAATATAGCCATTCCTCTCCAGATATTCCATTCCTTCACATATATCCTGGCATACACTCAGTAGCATTTCCTTCCTAAGCTTTCCTTTATTCTCCCTGAGATAGTTAAGCAGGCAGCCATTTTCCATGAACTCTGTCACAATGTAAAGGGGCTTCCGCTGTATACAGACTCCATAAAGTTGCACTAGCTTTGAATGAGATAATTTCCTGGTGAA chr4 - 94230402 25785772 25785771 25786008 68444395 68444394 68444631 237 CATTGTACTTACTAAATCACGGTGAATAAAGTTGTTTCTTTCCAGATACTCCATCCCTTCACACACATCCAGGCACATGCCCAGCAGCATGTCTCTGCTGAGCTTCCCCCGCCGCTGCCGCAGGTAGTTGAGCAGGCAGCCATTCTCCAGGAATTCAGTCACCACATAGAGAGGCTTCTGGCGTGTGCACACCCCATACAGCTGGACCAGCTTTGGATGGGATAGTTTCCTGTTTAA ..:::.......:.....x.x:......x..:::..:..:........:.....:........:.:....x....:.::.:...:.....x..::.x..:.....:..::xx:x..x..xx..:.....:..............:....x...:..x.....x.::..:..:......:.x:..:.:..x..:.....x..:..x..:.......:...:....:.......x.x.. 237M 172/237 72.6% 237/94230402 0.0% 0/237 0.0% 22294128 NA +10984 chr4 + 190214555 48079908 48079907 48080156 249 TTACCAAATCCCTATGAATATAGCCATTCCTCTCCAGATATTCCATTCCTTCACATATATCCTGGCATACACTCAGTAGCATTTCCTTCCTAAGCTTTCCTTTATTCTCCCTGAGATAGTTAAGCAGGCAGCCATTTTCCATGAACTCTGTCACAATGTAAAGGGGCTTCCGCTGTATACAGACTCCATAAAGTTGCACTAGCTTTGAATGAGATAATTTCCTGGTGAAGAAAAACATACACCAGTGAG chr4 - 94230402 25805371 25805370 25805614 68424789 68424788 68425032 244 TTACCAGGTCTCTGTGGATAAAGCTGTTCCTCTCCAGGTACTCCATTCCCTCGCAGACATCTTGGCACATCGTGAGTAGGACATCTTTACTCAAAACCCCACGTTTTTGTCTTAGGTAATTCAGAAGGCAGCCATGCTCCATGAACTCTGTCACAATGTAGATGGGTCTCTGTTGTGTGCACACACCATACAGCTGAACTAACTTCGGATGCGTTAGTTTCCTG-----AAAAGATCAGCATCAGGGAG ......::..:..:..:...x...::...........:..:........:..:..x.:...:.....:.:xx.x.....x.:x..:..x..x.:xx::..x:xx..:.x:..x..:..:..x..x..........x:.......................:.x...::..:.:...:.:..x..x.....x..:..x....:...:.:...x.x..:.......-----:...:.:xx:..:...x... 224M5D20M 172/244 70.5% 244/94230402 0.0% 5/244 2.0% 22274537 NA +9716 chr4 + 190214555 48086455 48086454 48086664 210 TTTATACGTACATCATCACTTTGGCCTCTTCAATGAAATCCTCTTCAGACATGGAGCCTTCATTGATGGCCTTGATAGCTACCTGGATATGTGACCGCCATTCACCTAAATGGACCACTCCAAACTGACCGCTTCCAATCTCCTTTATAAAAGCCAACTCAGATGGATCTATCTCCCACTTTTCTGAAAAAGTAAAACATCCATGTTACA chr4 - 94230402 25786783 25786782 25786991 68443412 68443411 68443620 209 TTTGTACTTACATCATCAATTTGGCCTCCTCCATGAAATCGTCTTCAGACATCGCACCTTCATTGATTTTTTTGATGGCAACCTTGATGGTTGTTTTCCATTTACCCAGATGAACAATTCCAAATTGCCCTCGCCCAAGCTCTTTCATAAACGTCAGTTCTGAGGGGTTCAATTCCCACTCCTCTATAAAAAC-AACCCTGTATGTTACA ...:...x..........x.........:..x........x...........x.x:...........xx::.....:..x....x...:xx..x::x.....:...:.:...:..x.:......:..x..x.x:....x...:..:.....x.:..::..x..x..:.::.x:.......::...:x....::-..x.x.x:........ 193M1D16M 151/209 72.2% 209/94230402 0.0% 1/209 0.5% 22299672 NA +9676 chr4 + 190214555 48086460 48086459 48086653 194 ACGTACATCATCACTTTGGCCTCTTCAATGAAATCCTCTTCAGACATGGAGCCTTCATTGATGGCCTTGATAGCTACCTGGATATGTGACCGCCATTCACCTAAATGGACCACTCCAAACTGACCGCTTCCAATCTCCTTTATAAAAGCCAACTCAGATGGATCTATCTCCCACTTTTCTGAAAAAGTAAAACA chr4 - 94230402 25805728 25805727 25805921 68424482 68424481 68424675 194 ACTCACATCATCACTTTGGCTTCTTCAATAAAATCCTCCTCATACATCGCGCCTTCCCGAATTGCTTTGATGGCCACTTTGTACTGTGCTCTCCATTTCCCAAGGCGCACTACTCCAAACAGGCCACTCCCCAGCTCTCTCATGAAAGTCAGCTCCGATGGATTGATTTCCCACTTCTCTGCAAAACCATAACA ..x:................:........:........:...x....x.x......x:x:..x..:.....:..:..:.x.xxx....x:.x.....:x..x.:::.x..:.........x.:..:..:..x.x...::.:..:....:..:...x.......:x..:........:....x....x:.x.... 194M 141/194 72.7% 194/94230402 0.0% 0/194 0.0% 22280732 NA +5374 chr4 + 190214555 48089745 48089744 48089849 105 TTTACCGTAGCTAAACCCAGCTGTGGCTGGTAAACAACTGCCCATCAGCCCAACTGGATATCGGAGACGAGTCATGAGACCTAAGGAGAAAGAGAAATCAATATT chr4 - 94230402 25787514 25787513 25787618 68442785 68442784 68442889 105 TTTACCGTAACTAAATCCTGCTGTTGCTGGTGAAGAACTGGTGATTGATCTGACTGGATGTCGGAGACGGGTGATAAGACCTGCAGGAAACAAAGCACCAATATT .........:.....:..x.....x......:..x.....x:x..::::.::.......:.........:..x..:......:x:.::..x:.::x.:....... 105M 75/105 71.4% 105/94230402 0.0% 0/105 0.0% 22302231 NA +4447 chr4 + 190214555 48095138 48095137 48095249 112 CTTACCTTCTAGCTCCCATAAATACGGAAATTGTGT-AGGAT-CCTAAATGTCTTGAATCTCTGACAATAAATGCACCTTCTTTAGACTGCAAAAAAAAT-----CATTTA-----TTGAATAA chr4 - 94230402 25788842 25788841 25788963 68441440 68441439 68441561 122 CTCACCCTTTAGA--CCGTGAATACACAGACAGTGTCAGGATTCCCTGTTGACTTGAATCTCTGACAACAAATGAACCTTCTTTGGACTGAAAAAGAAATGCAGGTATTTACTTTCTTGAATAA ..:...:.:...x--..:.:.....:x.:.:x....-.....-..:x:x..x................:.....x.........:.....x....:....-----:.....-----........ 13M2D21M1I5M1I57M5I6M5I8M 88/110 80.0% 122/94230402 0.0% 14/110 12.7% 22306296 NA +3747 chr4 + 190214555 48104893 48104892 48104961 69 TGAATTACCTCTTGTCTCAATAGATGTTCTGCCTGATTTCTGGTAATGTTTCTATGGTACCACCTGTAA chr4 - 94230402 25789702 25789701 25789770 68440633 68440632 68440701 69 TGAGTTACCTTCTGTCGCAAGAGTAGTTCTGCCTGGCTTCTGTTGATGTTCTTGCAATACCACCTGAAA ...:......::....x...x..xx..........::.....x.:.....::.::::.........x.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 22315191 NA +5571 chr4 + 190214555 48110520 48110519 48110635 116 ATTTTGGAGAAGACTTACTCATATATTTCTAAATTAGTTATTTTGTTTTCAGTCACATAGTTGCTTGGGATTAAGCCTTCATTCCTACAACAAA---AGAAAAAGCAAAAATCAAAATG chr4 - 94230402 25790717 25790716 25790835 68439568 68439567 68439686 119 ATCTTCAAGAGTACTTACTCATATGTTTCCAAATTACTTTTTGTGTTCTCAGTAACATAGTTGCTAGGAATTAGACCTTCATTCCTGAAATATATTGAGGATAATAGAATACTAAGATG ..:..x:...:x............:....:......x..x..x....:.....x...........x..:....::...........:x..:.x.---..:.x..xx:..x.::..:... 94M3I22M 87/116 75.0% 119/94230402 0.0% 3/116 2.6% 22319803 NA +3397 chr4 + 190214555 48110532 48110531 48110612 81 ACTTACTCATATATTTCTAAATTAGTTATTTTGTTTTCAGTCACATAGTTGCTTGGGATTAAGCCTTCATTCCTACAACAA chr4 - 94230402 25809686 25809685 25809766 68420637 68420636 68420717 81 ACTTACTCATATTGATCAAGGTTGTTGGACTTCTTTCCTGTTACGTAGTTGCTTGGGATATATCCTTCATGCCTAAAAGAA ............xxx..x.::..:x.x:x:..x...:.x..:..:..............xx.x.......x....x..x.. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 22300846 NA +7580 chr4 + 190214555 48112297 48112296 48112479 183 AGTGTCTTACCCCAAACGGTCTCTTGCCTTCCACCAGTGAGGATTGTATTTCTCCAGTATCAGGTATTCTTCTGCTCTCCTTAAGGCTAAATTACAGGGTTCTCTGGGCAGAAAATCATAAAGTGCCTTGACTTGGATCTTC---------TCTTCAGCAACCTCAGAGGGTGGGAGGGGAGGCAGTGGCTT chr4 - 94230402 25791897 25791896 25792085 68438318 68438317 68438506 189 AGTCTCTTACCCATAATGGTCTCTTGCCTTCCACCAGTGAGGATCATACTGTTCAAGGATAATGTATTCTTCTGACTGCTTGAGTGTTAAATCAGAGGGTCCTCTAGCGAAAAAGTCATATAGAGCAATAACTTTGAGGTTTTTTGTGTAGTCTGCAAAAGCCTCAGCAGGT---AGAGGAGGTAACGGCTT ...x........xx..:...........................::..:.x:..x..x..x.x...........x::x.:.x.:x.:.....:.x.....:....:.xx.:...:.....x..x..xx.:....x..xx..:---------...x..:x.:......x:...---..:.....:.::..... 142M9I21M3D17M 131/180 72.8% 189/94230402 0.0% 12/180 6.7% 22320400 NA +5617 chr4 + 190214555 48112303 48112302 48112484 182 TTACCCCAAACGGTCTCTTGCCTTCCACCAGTGAGGATTGTATTTCTCCAGTATCAGGTATTCTTCTGCTCTCCTTAAGGCTAAATTACAGGGTTCTCTGGGCAGAAAATCATAAAGTGCCTTGACTTGGATCTTCTCTTCAGCA---------ACCTCAGAGGGTGGGAGGGGAGGCAGTGGCTTTCGTT chr4 - 94230402 25810641 25810640 25810828 68419575 68419574 68419762 188 TTACCCATGCTTGTCTCTTGCCTTCCACCAGTGAATGTCATTCTTCTCAATTACCATATATTCTTCACCTTTATCTAACCTTAAATCATGACATTCTGTGGGCTGGAAGTCATACATCGCAACCACT---ATCTCCTCCTCATCGTTATCATTTTCCTCAGCTGGAGGAACAGGTGGTGGCGGCCTTCGCT ......xx:x:x......................:x:.::.x:.....x.x..:..x:........xx..:.x::...xx:.....:.:::x:....x.....x.:..:.....x.x:..xx:x...---....:...:...x.:---------x......xx..x..:.x:..x..::.:...:....:. 127M3D15M9I37M 118/179 65.9% 188/94230402 0.0% 12/179 6.7% 22301662 NA +3290 chr4 + 190214555 48120066 48120065 48120131 66 TCAGCATATATATACACACACACACACGTACACAAATATACGTATACATACACATACATATGTATA chr4 - 94230402 17520746 17520745 17520811 76709592 76709591 76709657 66 TCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...:..x.......x.....x.:....:....::x:x..:.x.:..:.x......:.....:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 30599320 NA +3355 chr4 + 190214555 48120069 48120068 48120199 131 GCATATATATACACACACACACACGT----ACACAAATATACGTATACATACACATACATATGTATATACATGTGTATATATGTATATATGCATATATATGTATATACGTATA-------TGTGTATATATACATACACACA chr4 - 94230402 89016086 89016085 89016227 5214176 5214175 5214317 142 GCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCA ...:.:..x.:..::...........----:....x.:..:.:x..:.......:..x..:...:.::.x.:::x.::::.:::.::x....:.::x:...x::.:..x.::.-------....:x:....x..:..x.x.. 26M4I83M7I22M 78/131 59.5% 142/94230402 0.0% 11/131 8.4% -40896017 -53334385 +3637 chr4 + 190214555 48120112 48120111 48120217 106 CATACACATACATATGTATATACATGTGTATATATGTATATATGCATATATATGTATATACG----TATATGTGTATATATACATACACACATATATACGTATATATGTA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:::...:.....x:...:....:.::.:.x.x.:..:x:.:....::...:x:..:...----...:..x...:.....x....:.x..:.x.x..::.:..:.:.. 62M4I44M 67/106 63.2% 110/94230402 0.0% 4/106 3.8% -25000988 -69229414 +3524 chr4 + 190214555 48120141 48120140 48120213 73 ATATATGTATATATGCATATATATGTATATACGTATATGTGTATATATACATACACACATATATACGTATATA chr4 - 94230402 8395788 8395787 8395860 85834543 85834542 85834615 73 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ..:.:.....:.:......x.:......x...:...:.:..:x..:..xx.........:.:.:..::.x.:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 39724353 NA +3190 chr4 + 190214555 48120170 48120169 48120239 70 TACGTATATGTGTATATATACATACACACATATATACGTATATATGTACATATATACGTAT---ATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .::...:..::x.:.........:....x......xx..:.......::..:...x.::.:---......... 61M3I9M 51/70 72.9% 73/94230402 0.0% 3/70 4.3% 10757130 NA +3123 chr4 + 190214555 48131404 48131403 48131480 77 CAAACTCCTCAGCTTAAGCAAT---------CTTCTTCGC----TGGACTTTTTTTGTTTGTTTGTTTGTTTTTTGATTAACAGTAATAC chr4 - 94230402 15641944 15641943 15642031 78588372 78588371 78588459 88 CAACCTCTACA--TTAAGCAGTAGCTTCCCACTTGTTTGCAGGGTGGTTTTTTTTTTTTTGCTTGTTTGTTTTTTTAATAACAGTAATGC ...x...:x..--.......:.---------...x..:..----...x:.......x....:.............x.x..........:. 11M2D9M9I9M4I46M 62/75 82.7% 88/94230402 0.0% 15/75 20.0% 32489460 NA +3140 chr4 + 190214555 48132550 48132549 48132613 64 CTTTGAGAGCTTATTTATACATATAAACTCATTTATATATGTGTGTATGTGTGTGTGTATATAT chr4 - 94230402 26564508 26564507 26564571 67665832 67665831 67665895 64 CTCTGGGAGTAGTTTTTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ..:..:...:xxx...x.:x.xx...::.x..........:.....:.......:......... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 21568042 NA +7833 chr4 + 190214555 48138586 48138585 48138840 255 CTATAAAGACTGCATGTTATCCATCTACCAAGCCCAATCCCTAAGAGATTCA---------------AAAAGAAAGCACACAAAAAAT------CTATACCTCCTGCCAACATCTCAGCATCACCTCATACACATAGTTGGACGCCAACTTCGGCTGGTAGAGTCGGTGGCCTCGAGTAACCATGGTTACCACTTCATAATTGGTGTATTTTTCAAAAGGCATTCTGCCTTCCGTGAATACTTCCCACATTAAAACACCTGGAAAAGGATAAGGAT chr4 - 94230402 25782222 25782221 25782491 68447912 68447911 68448181 270 CTATCAAGGATAC---CTATCTATCTATCAAGGATAGCCTTCA---GATCCACATTGCAAGTGAAGTAAAATAAGTCACAAGAAAGAAGGAGCAACAAACCTCATGCCAGCAGCTGTACATGACTTTGTACACTGTGTGTGACGCCAAATGCGGTCGATAAAGTCGGTTACCTGCAGAAATCTCACGGACAACTTCGTAATTTGATTTACTTTCAAAAGGCATTTTGCCTTCTGTGAAAACTTCCCACATCAGTACACCTAGAAATGAATCAAGAT ....x...:x.:.---:....:.....:....xx:.::.:::.---...:..---------------....x..:x....x:...:.x------x:.x.....x.....:..x..xx:...x..:.::.....xxx..xx........x.x...::.:..:.......x:...xx..x..:.x::xxx..x.....:.....x.xx.xx:..............:.......:.....x...........:.:x......:....x.:..x.:... 13M3D27M3D6M15I21M6I182M 171/249 68.7% 270/94230402 0.0% 27/249 10.8% 22356364 NA +10849 chr4 + 190214555 48138633 48138632 48139027 395 ATTCAAAAAGAAAGCACACAAAAAATCTA--TACCTCCTGCCAACATCTCAGCATCACCTCATACACATAGTTGGACGCCAACTTCGGCTGGTAGAGTCGGTGGCCTCGAGTAACCATGGTTACCACTTCATAATTGGTGTATTTTTCAAAAGGCATTCTGCCTTCCGTGAATACTTCCCACATTAAAACACCTGGAAAAGGA-------------------------------------------------------------------TAAGGATTACCAAATGGA--------------------------------------------------TGTATCCACTTTCTCCT------------------------------------------------------------------CAGGGCGGACG---------------------------------------------------------------GACATGAGG-AAACATGG---------------------ATCTTACCAAATGACCAGACATCTGATTTGCTGCTGAAGCGGCTGTAATTAAACACTTCAGGTGGACACCACTTCACAGGAAACTTAGCACCAGAAGAACTTGTGTACTGATCATCCAGAACATACCTAGA chr4 - 94230402 25803414 25803413 25804074 68426329 68426328 68426989 661 ATTCAAAGGCAAA----AATAAAAATGTGCTTACCTCCTGCCAGCACATCATCATGACTTCATATACTTGCTTGCAGGCTAGTTTGGGGCGGTACAAACGATGCCCTTGGCTAACCATAGTTACCACATCATAGTTGGAACTTTTTTCGAAGGGCATTTTTCCTTCTGTAAACACTTCCCACATTAAAACACCTAAAAAAAAAATTAAATAAACATTAAGTAAGCAAACAAATAATTTCTTAAAATAGATGTTTATTTTGAGCTCTGGACTCAGGCTTACTAAAAGGAAAAAATAGTTTGAAATCCATATTACAGAACAAGCCTGCACACGTCATCACTGAACAAACTTTATTCTAGTAGCATGTGTTTTAATACATAACACCTCTAATAACCTCTGTGGAGCTTCATGCAAGCATAAAACCACAGCAAATGATTTCTCTGAGCTCCTTCTTAGATGTGTGAATACTACCCAATAACTAGAGTTTAACTGCTATTGACAAAATGTAAAAATAGTGCTTTGTTTCAGTGATAAACACCTTACCGAACGACCAGACATCTGACTTGCTGCTGAATCGACTGTAATTAAAAACTTCTGGCGGGCACCACTTCACAGGAAATTTAGCCCCTGAGGAGCTTGTGTATTGATCATCAAGGACATACCTAAA .......::x...----.xx......x.:--............:..:x...x...x..:.....:..x.:x...x.x..:.::..x..x:....x.:x..:..x...:.:x.......:........x.....:....x::x......:..:......:.x.....:..:..:.....................::....::.-------------------------------------------------------------------.x...x....:...x...--------------------------------------------------..x.:xx.....x.:..------------------------------------------------------------------..x:..::.:.---------------------------------------------------------------....x:.x.-...x..:.---------------------.:......:..:..............:...........x..:...........x.....x..:..:.................:.....x..x..:..:........:........x..:.........:. 13M4D12M2I172M67I18M50I17M66I11M63I9M1I8M21I131M 301/391 77.0% 661/94230402 0.0% 274/391 70.1% 22335219 NA +8977 chr4 + 190214555 48138661 48138660 48139030 370 ATACCTCCTGCCAACATCTCAGCATCACCTCATACACATAGTTGGACGCCAACTTCGGCTGGTAGAGTCGGTGGCCTCGAGTAACCATGGTTACCACTTCATAATTGGTGTATTTTTCAAAAGGCATTCTGCCTTCCGTGAATACTTCCCACATTAAAACACCTG-----GAAAAGGATAAGGATTACCAAATGGATGTATCCACTTTCTC-------CTCAGGGCGGACGGAC---------------ATGAGGAAACATG-GATCTTACCAAATGACCAGACATCTGATTTGCTGCTGAAGCGGCTGTAATTAAACACTTCAGGTGGACACCACTTCACAGGAAACTTAGCACCAGAAGAACTTGTGTACTGATCATCCAGAACATACCTAGAGTA chr4 - 94230402 92210180 92210179 92210573 2019830 2019829 2020223 394 ATACCTCGTGCCAGCAGCTGTACATGATGGCGTAGACCCGCTCCGAGGCCTGCTGGGGCCTGTAGAGGCGCAGGCCTTGAATGACGTGTTCTGTGGTCTCACTGTTGTTAAACCTCTCGTAAGGCATCTTTCCCAAAGAGTAAACCTCCCACATCAGCACGCCTGCAGTGGGAAATGGCAGGGA----CACATCATAGCATCCATGCGCAGTGGAGAGCTCACTGCTGGTGGGCCTCCTCCTGCCCTGAGTCATTAACCCTGTGCTCTTACCAAACGACCACACATCGGATTTGCTGCTGAACTTGCTGTACAGAAGCACTTCAGGAGGAGACCACCGAACTGGAAACTTTGACCCCATGGAGCTTGTGTACTCATCATCCAGGACGTATCTGCAGCA .......x.....:..x..xx:...x.:xx.:..x..x::x.:x..x...x:..xx...:x......x..xx.....:..:.:..xxxxx:.::x:::...:x:...x.:x.::.:..:x.......::.x..:xxx.x.x.x..:........:.:x..:....-----.:...x.::.:...----..x..x:xx.:.....:x:x.xx-------....xx..x.::..:.---------------:.x.xx..x.x..-.x..........:.....x.....x..............x:x......xxx..:.........x...x.....:xx..x........x.xx..x:x:..:..........x.........:..:..:..:x..:. 165M5I14M4D23M7I16M15I13M1I135M 236/366 64.5% 394/94230402 0.0% 32/366 8.7% -44071519 -50158883 +5206 chr4 + 190214555 48141339 48141338 48141427 89 GTATACTTGGACATACCTGGCCATTCCAAAATCAGATACTTTTACAACTCCCGCCTCACTTACTAGACAATTTCTGGCAGCCTGGAAAA chr4 - 94230402 25804821 25804820 25804909 68425494 68425493 68425582 89 GCACACTCAGCCATACCTTGTCATCCCAAAATCAGATACTTTGACCACTCCCAAATCATTCACCAAGCAGTTCCTGGCAGCCTGCAAAA .:.:...::.x.......x.:...:.................x..x......:xx...:.:..:.::..:..:...........x.... 89M 68/89 76.4% 89/94230402 0.0% 0/89 0.0% 22336518 NA +3336 chr4 + 190214555 48141352 48141351 48141427 76 TACCTGGCCATTCCAAAATCAGATACTTTTACAACTCCCGCCTCACTTACTAGACAATTTCTGGCAGCCTGGAAAA chr4 - 94230402 25785160 25785159 25785235 68445168 68445167 68445243 76 TACCTTGCCATGCCAAAGTCGGATACTTTAACAGTGTGTTCAGCATTGACTAAGCAGTTCCTTGCAGCCTAGGAGA .....x.....x.....:..:........x...::x:x:x.xx..:.x....::..:..:..x.......:.:.:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 22356192 NA +24553 chr4 + 190214555 48145074 48145073 48145588 515 GTTACCAGATCTCTGTGGATGAAGCTGTTTCTCTCCAGATACTCCATCCCTTCACACACATCCTGACACATGCTCAGCAGTACGTCTCTACTGAAATGACCTTGTCTCTGTCGGAGGAAATTCAGAAGGCAGCCCCTTTCCATGAACTCAGTAACAATGTATATTGGTTTCTGCTGGGTGCACACACCATAAAGCTGCACTAACTTCGGGTGTGTCAGTTTCCTGGGAAGGAAGACATATATATAGTTACT---------------ATA-------------------GGAAAAGAAACTACCA-----AGTTTTTG--GTAAGGGGCCACTTCTTAATACAAAAAGATGAGCCAGAAAGATG-ATAGCAACTTACATCATCACTTTAGCTTCTTCTATAAAGTCCTCCTCGCACATTGCACCTTCCCGAATAGCTTTGATTGCGACTTTGTACTGGGCTCGCCATTTGCCAAGCCTCACCACTCCAAACAGTCCACTTCCCAATTCCCTCATAAAGGTCAGTTCTGAAGGGTTAATCTCCCATTTCTCTGCAGGAC chr4 - 94230402 25805370 25805369 25805914 68424489 68424488 68425033 545 GTTACCAGGTCTCTGTGGATAAAGCTGTTCCTCTCCAGGTACTCCATTCCCTCGCAGACATCTTGGCACATCGTGAGTAGGACATCTTTACTCAAAACCCCACGTTTTTGTCTTAGGTAATTCAGAAGGCAGCCATGCTCCATGAACTCTGTCACAATGTAGATGGGTCTCTGTTGTGTGCACACACCATACAGCTGAACTAACTTCGGATGCGTTAGTTTCCTGAAAAGATCAGCAT-CAGGGAGTTACTGCTTTCCACCTCCCAATACCGCCAAAGTACACCCGCCTGAAGTGATTTTTCCATAACTAGTATATGCCATCAGAGGCCA-----------AGAATAAAGGTCCCAAGCACTGTGCAGCAACTCACATCATCACTTTGGCTTCTTCAATAAAATCCTCCTCATACATCGCGCCTTCCCGAATTGCTTTGATGGCCACTTTGTACTGTGCTCTCCATTTCCCAAGGCGCACTACTCCAAACAGGCCACTCCCCAGCTCTCTCATGAAAGTCAGCTCCGATGGATTGATTTCCCACTTCTCTGCAAAAC ........:...........:........:........:........:..:..:..x.....:..:.....xx.x..:..x..:...:....x...xxx..x:..:.:....xx...x................x:x:...........x..x........x..x...:....:..x..............x.....x...........:..:..:.........::...:xx::...-:.x:x.......---------------...-------------------x...:x..xx:.x...-----...x.x..--:.x..:.....-----------.:..x:.x.:x..x:.:x:x..-::.......:.............:........x.....:........::....:..:...........x........x..x...........x....x......x.....x.x...:...........x.....:....::..:.....:..:.....:..:..x..:..:..:.....:.........::.. 238M1D12M15I3M19I16M5I8M2I11M11D22M1I193M 389/503 77.3% 545/94230402 0.0% 54/503 10.7% 22339704 NA +12397 chr4 + 190214555 48145075 48145074 48145298 224 TTACCAGATCTCTGTGGATGAAGCTGTTTCTCTCCAGATACTCCATCCCTTCACACACATCCTGACACATGCTCAGCAGTACGTCTCTACTGAAATGACCTTGTCTCTGTCGGAGGAAATTCAGAAGGCAGCCCCTTTCCATGAACTCAGTAACAATGTATATTGGTTTCTGCTGGGTGCACACACCATAAAGCTGCACTAACTTCGGGTGTGTCAGTTTCCTG chr4 - 94230402 25785780 25785779 25786003 68444400 68444399 68444623 224 TTACTAAATCACGGTGAATAAAGTTGTTTCTTTCCAGATACTCCATCCCTTCACACACATCCAGGCACATGCCCAGCAGCATGTCTCTGCTGAGCTTCCCCCGCCGCTGCCGCAGGTAGTTGAGCAGGCAGCCATTCTCCAGGAATTCAGTCACCACATAGAGAGGCTTCTGGCGTGTGCACACCCCATACAGCTGGACCAGCTTTGGATGGGATAGTTTCCTG ....:.:...x.x...:..:...:.......:..............................x.:.......:......:.:......:....:x.xx..::.:.x...:..x...x.:..x..x........x:.:....x...:.....x..x.::..x.xx..:.....x:.x........x.....x.....x..:.:...:..:..x.x:......... 224M 170/224 75.9% 224/94230402 0.0% 0/224 0.0% 22359295 NA +12099 chr4 + 190214555 48145076 48145075 48145603 528 TACCAGATCTCTGTGGATGAAGCTGTTTCTCTCCAGATACTCCATCCCTTCACACACATCCTGACACATGCTCAGCAGTACGTCTCTACTGAAATGACCTTGTCTCTGTCGGAGGAAATTCAGAAGGCAGCCCCTTTCCATGAACTCAGTAACAATGTATATTGGTTTCTGCTGGGTGCACACACCATAAAGCTGCACTAACTTCGGGTGTGTCAGTTTCCTGGG--------AAGGAAGACAT--------ATATATAG---------------------TTACTATA-----------------------GGAAAAG-----------------------AAACTACC-----------AAGTTTTTG--GTAAGGGGCCACTTCTTAATACAAAAAG---------------------------------------------------------------ATGAGCCAGAAAGATGATAGCAACTTACATCATCACTTTAGCTTCTTCTATAAAGTCCTCCTCGCACATTGCACCTTCCCGAATAGCTTTGATTGCGACTTTGTACTGGGCTCGCCATTTGCCAAGCCTCACCACTCCAAACAGTCCACTTCCCAATTCCCTCATAAAGGTCAGTTCTGAAGGGTTAATCTCCCATTTCTCTGCAGGACAGAAAGTGAAAGTGT chr4 - 94230402 92211732 92211731 92212416 2017987 2017986 2018671 685 TACCAGGTCTCGGTGCAGGAACTGCTTGGATTCCAGGTACTCCATAGCTTCACAGACATCTTTGCACATTTCCAGCAGCTCAGCAGGCTGGAACCGCCGCTGAGTTTCCCTCAGGAAGTTCAGGAGACAGCCATTGGCCATGTACTCAGTGATGATGAAGATGGGACGCTGCTTTGTGCAGACCCCATAGAGCTGCACCAGCTTCTCATGAGATAGGTTCCTGTGTTGGGGGCAAGAAGGGCATTTCTGAGCATCTGCAGGGACAAGCTGCAAAAGAAGCATTGCTGAATAAGGAGAGGGAGAATTGGGCAGGGAAAAGTGCTCCTGGAATTCTCACTGGCAAAACCAGCACAAAGAGTATAGGCTGTTGAAGTGTGGATTCATGTAGCAATGCACGAAGCAGCCTGATGCTGTCCCTCCAAACCATCTGGGAGTGCAGGTATTCTGACAAGATATATGCTGCACTGACCTGGGGGCTGCTCACCACTTACATCATGACTTTGGCTTCATCAATAAACTCGTCCTCTGACATGGATCCCTCCCTGATCATCTTGATGGCAACGTTGTATTGGCCTCTCCATTTCCCGTACTTCACTACGCCAAACTGCCCTGTCCCCAGTTCCTTCAGGAAGGTCAGGTCCTTCGGGTCAATCTCCCACGACCCT--AGGACAGAGAGTGTGAGTGT ......:....x...x.x...x:xx..xxx:.....:........xx.......x.....:.x:.....x::......:x.:x.xxxx:x...x:.x.x:..xx.:.x:.xx.....:.....:..:.....x:.xx.....x.......:.::...x.x..x..x:x.....xx.....x..x.....:........:.:....xx:..x.x:..x......x.--------...:.:.:...--------..x.::..---------------------..:..:x.-----------------------.......-----------------------....:.x.-----------.:.:.x...--..:x..:x:..:x.xx:...:..x:...---------------------------------------------------------------.:x::..x.:::.x..x.x:.x...........x.....:.....x..x.....x..x.....xx....x.xx..:....x:..x:::.....x..:..x.....:...x...x......x..:x:.:....:..x......x.:..xx.:....:....:...x:........x..:xxx....:.........:xx.:..--........:....x:..... 225M8I11M8I8M21I8M23I7M23I8M11I9M2I28M63I202M2D20M 357/526 67.9% 685/94230402 0.0% 161/526 30.6% -44066656 -50163746 +7613 chr4 + 190214555 48145402 48145401 48145587 186 ACTTACATCATCACTTTAGCTTCTTCTATAAAGTCCTCCTCGCACATTGCACCTTCCCGAATAGCTTTGATTGCGACTTTGTACTGGGCTCGCCATTTGCCAAGCCTCACCACTCCAAACAGTCCACTTCCCAATTCCCTCATAAAGGTCAGTTCTGAAGGGTTAATCTCCCATTTCTCTGCAGGA chr4 - 94230402 25786788 25786787 25786973 68443430 68443429 68443615 186 ACTTACATCATCAATTTGGCCTCCTCCATGAAATCGTCTTCAGACATCGCACCTTCATTGATTTTTTTGATGGCAACCTTGATGGTTGTTTTCCATTTACCCAGATGAACAATTCCAAATTGCCCTCGCCCAAGCTCTTTCATAAACGTCAGTTCTGAGGGGTTCAATTCCCACTCCTCTATAAAA .............x...:..:..:..:..:..:..x..:..:x....:........x:x:..xx:......x..:..:...xxxxxx.:.:x......:..x..x:xx..x.:......:x.:..x.x:..x.::..::.......x...........:.....x.x:.....:.:....::.::. 186M 125/186 67.2% 186/94230402 0.0% 0/186 0.0% 22358614 NA +5131 chr4 + 190214555 48146319 48146318 48146412 94 AGTTACCATAGCTGAATCCTGCAGTGGTGGGTGCATTCTTCCCTTTCACACTAACTGGGTACCGAAGCCTGGTGACAAGTCCTAATAATCAAAG chr4 - 94230402 25806651 25806650 25806744 68423659 68423658 68423752 94 AGTTACCATAGCTGAATCCTGCAGTTGTTGGTGCTGCTGTCTTCTTTGGCGTCACTGGGTAACGTAGCCTGGTAACAAGACCTGATGATCAAAG .........................x..x.....xx::x..:::..::xxx.x........x..x........:.....x...:..:....... 94M 72/94 76.6% 94/94230402 0.0% 0/94 0.0% 22339668 NA +9294 chr4 + 190214555 48149545 48149544 48149812 268 CAGCTCACTTACCTGCTGCATTGTGCTTATGATATTCAATAATCTCAGGAATGGAGCCAAAAGCATGTTTTTCAGCTAGGTAATACTTCTTTGGAGATGTTGTTGTTTCCTTTATATGATAATGCCTAAAACCCGATGAACCTTCTCTAGAACAA--AAATCAAAATGTGTCA--GAACCAAGTTGAAATAATAGAACTTCATTCTTAAGATG---TTTTCTACAAGGGCAACCACAGTGTCTCTCCATATGATCCCATCTATTCCTGGCACAAA chr4 - 94230402 25807853 25807852 25808114 68422289 68422288 68422550 262 CAGTCCATCTACCTGCTGCATTATGTTTGTGATACTCAATGATTTCTGGAATGGAGTTAAAGAGATGTTTTTCTGCAAGGTAGTATTGCTTTGGAGAGGTCACTGTTTCTTTTATATGGTAGTGTCTTATTCCTGATGAACCTTCTCTGAAAAAAACAAGTAAAACAACGTCATTTATTGAAGATTAACCCACAAGAATTAATTCTCAGTTTGGCTTGCTCCTCAA-------CACAG---CTCCCCACATGAGCAAATAGG---CTGGCACAAA ...::..::.............:..:..:.....:.....:..:..x.........::...::x.........x..x.....:..:.x.........x..:::......:........:..:..:..x.xx..:..............::..x..--..:.x...xx::....--x.x:x...x.x..x:x.:.::.x..x.....:.:xx..---.x:..:x...-------.....---...:...:....x.xx..xx:---.......... 155M2I16M2I38M3I10M7D5M3D21M3D10M 183/255 71.8% 262/94230402 0.0% 20/255 7.8% 22341692 NA +5215 chr4 + 190214555 48149553 48149552 48149775 223 TTACCTGCTGCATTGTGCTTATGATATTCAATAATCTCAGGAATGGAGCCAAAAGCATGTTTTTCAGCTAGGTAATACTTCTTTGGAGATGTTGTTGTTTCCTTTATATGATAATGCCTAAAACC----CGATGAACCTTCTCTAGAACAAAAATCAAAATG---TGTCAGAACCAAGTTGAAATAATAGAACTTCATTCTTAAGATGTTTT-CTACAAGGGCAACCACAG chr4 - 94230402 25788311 25788310 25788520 68441883 68441882 68442092 210 TTACCTGCTGCATTGTGTTGATGATATTGAATGAGCTCAGGAATAGAGGAGAATAGATATTTTTCTGCTACATAATACTGTTTC----AAGTGGT--TTTTCTTAATTTGATAATGTCGAATGTCTCCACCATGA--CTTCT--------GAAATCAAAAAAGATTGTCAGTAAAAACATTTGATACTACA-----AGTCTAACTATATTTTACTGGTATGGCAGCCACAG .................:.x........x...:.x.........:...xx:..x:x..:......x....x:.......x:..:----.x..x..--...:...x..x........:.x..x::.----.x....--.....--------:.........x:---......x.xx..xx.xx:...x..x.-----.x...x.xx..:....-..:xx.x....:...... 84M4D7M2D28M4I6M2D5M8D12M3I26M5D16M1I18M 149/202 73.8% 210/94230402 0.0% 29/202 14.4% 22361242 NA +7247 chr4 + 190214555 48150812 48150811 48150968 157 AAGTTCATACAAAAACTCTAAATTATAAAAAAAAATGGCAGGATTACTCACCCTCCAAACTTGGTATAAAGGGAGACTGTGTACAAGCCTGGTTGACTGGAATCCCTTACCATAAAACCACCTTCTTTATCCTAAAATCCAAGTTCAGAAAAAATTT chr4 - 94230402 25808319 25808318 25808469 68421934 68421933 68422084 151 AAATTCAGACAAGG----TAAAGTATGCAGGGTGGACACAGAA--ACTTACCCTCCAAATTTTGTATAAAGGGAAACTGTATACAGGCCAGGCTGACTTGAATCTCTCACCACAAAACCACCTTCTTTGTCCTAAAATGCAAGCACATTGACAGTTT ..:....x....::----....x...:x.:::x::xx:...:.--...:..........:..x...........:.....:....:...x..:.....x.....:..:....:...............:.........x....:x..xx:.x.:... 14M4D25M2D112M 113/151 74.8% 151/94230402 0.0% 6/151 4.0% 22342493 NA +3703 chr4 + 190214555 48156674 48156673 48156744 71 ACTTACTTCACTGCGGAGGAGTTGCTCTGCCTTGCTTCTATTCATATTTCTGCAATACCATCTG-AACAGAA chr4 - 94230402 25808594 25808593 25808665 68421738 68421737 68421809 72 ACTCACCTCATTTCTAAGGAGCTGCTCTGCCTTGCTGCGGTTCAGGTTCCTGCTGTACCATCTGCAACACAA ...:..:...:.x.x:.....:..............x.x:....x:..:....x:.........-....x.. 64M1I7M 55/71 77.5% 72/94230402 0.0% 1/71 1.4% 22348080 NA +3112 chr4 + 190214555 48160733 48160732 48160795 63 AAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAGAAAGAAAGAAAAGAAAAGAAG chr4 - 94230402 32280614 32280613 32280676 61949727 61949726 61949789 63 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAG ........:...............::...x.xx.:...:..x..:..x:..:x.x:....:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 15880119 NA +7327 chr4 + 190214555 48163662 48163661 48163796 135 TTTCTGATTTTCCACATTCACAAAATAAACATTTACTTACTCATATTGATCTAAGTTGTTTGATTTCTTTCCCGTTACGTAATTACTTGGGATATATCCTTCATTCCTAGAA----ATAAGAAAAATACTTTAGGTAAA chr4 - 94230402 25809653 25809652 25809790 68420613 68420612 68420750 138 TTTATGATATTCCACATTT-TAGTTCAAACATTCACTTACTCATATTGATCAAGGTTGTTGGACTTCTTTCCTGTTACGTAGTTGCTTGGGATATATCCTTCATGCCTAAAAGAATATGTAATATATACTCTGAGCAAA ...x....x.........:-:.:xx:.......:.................x.:......x..:........:........:..:...................x....:..----..:x:.x.x.....:.::.:... 19M1D92M4I23M 107/134 79.9% 138/94230402 0.0% 5/134 3.7% 22354009 NA +4179 chr4 + 190214555 48167766 48167765 48167911 146 GGGAATACTTACCCATATTTATCTCTTGCTCTCCACCAATGAACATCATTCTTTTCTAAAATGAGATACTCTTGGCCTCTCTCTAATCTGAGATCATGTCCTTCTGCTGCTTGGAAATCATACATGGCTACAACGATTTCTTCACT chr4 - 94230402 92214868 92214867 92215011 2015392 2015391 2015535 144 GGGAGTTCTTACCCATTTTTGTCACGTGCTTTCCACCAAGGCAGGTGGCTTTCCTCCAGGATGAGGTACTCCTCACCCTTCTGAAGCTGCAGGTCCTGCACATTCATTGGCACATAGTTGTACAGGGCCACCAC--CTTCTTCATT ....:.x.........x...:..x.x....:........x.x.x:.x::.:.::..:.::.....:.....:.x:..::...xx.:::xx..:..x..:x.x.::::..x:xx:x.:.::....x...:..x..--:.......:. 134M2D10M 88/144 61.1% 144/94230402 0.0% 2/144 1.4% -44047102 -50183300 +8873 chr4 + 190214555 48167770 48167769 48167972 203 ATACTTACCCATATTTATCTCTTGCTCTCCACCAATGAACATCATTCTTTTCTAAAATGAGATACTCTTGGCCTCTCTCTAATCTGAGATCATGTCCTTCTGCTGCTTGGAAATCATACATGGCTACAACGATTTCT------TCACTATTATCTTCTTCTTCTAGTGGAATTGGTGGGGGAGGCCTTCGCTAGACAAGGAAGATAACA chr4 - 94230402 25810637 25810636 25810838 68419565 68419564 68419766 202 ATATTTACCCATGCTTGTCTCTTGCCTTCCACCAGTGAATGTCATTCTTCTCAATTACCATATATTCTTCACCTTTATCTAACCTTAAATCATGACATTCTGTGGGCTGGAAGTCATACATCGCAACCACTATCTCCTCCTCATCGTTATCATTTTCCTCAGCTGGAGGAACAGGTGGTGGCGGCCTTCGCT-------GAAAATGACA ...:........::..:........::.......:....::........:..x.xx.:x.x...:....x:...:.x.....:..x.:......x.x.....:x.x:.....:........x..x..x..x..:..:------..::...:..:...:..xx..:.x....:x.....x..x..........-------...:..:... 137M6I49M7D10M 144/196 73.5% 202/94230402 0.0% 13/196 6.6% 22357133 NA +10660 chr4 + 190214555 48170195 48170194 48170419 225 ATAATACGTTCATTCTAAGCACAATATAATT--ATGGAATAAAATGAATACTTACTGCTCTCAAAAAGATTGTATTTTTCACATCCGGGTGCTAATTTTTCAGTTTGTCTACAACACTGATAACTTCCATCTGTCCAGAATTTAGGATGATATTTAATCATAATATTATTGTTGTTCTTTATTTCTGTAATTCACAGATATAGTAATTAATAGTGAAATACAAAAGC chr4 - 94230402 25812130 25812129 25812346 68418057 68418056 68418273 217 ATGACATGATCAT----AGGCCAACACCATTTCACGTAAGAACACATGTACTTACTATTTTCAAAAAGATTGTATTTTTCACACCCAGGTGCTAATTTTTCTGTCTGTCTGCAGCACTGATAAATTCCTTCTGTCCAGAATTTAGGATGATATTTTATCATTATATTGCTGTTGTTCTTTATTCCTACA------GGAAATAAAGAGCAAAGGTCAAACAAACAAAC ..:.:.:.x....----..xx...:.:x...--.:.x..x..x.::x:........::.:.......................:..:..............x..:.....:..:.........x....x..........................x.....x.....::..............:..::.------:..x...:x:.x:..x:..x...:.x.x..:. 13M4D14M2I156M6D32M 166/215 77.2% 217/94230402 0.0% 12/215 5.6% 22358065 NA +6410 chr4 + 190214555 48171364 48171363 48171465 102 TTACCTTCTTTTAACTTCTTCACCCACAGGTCCCTGCTTTGTGGACTAGGTGCAAAAATGTAAAGTGTGTTAGCATCATGAACAACCTAAAATAAAACAAAA chr4 - 94230402 25813758 25813757 25813859 68416544 68416543 68416645 102 TTACCTTCTTTCAGATTCCTCACCCACTGATCCCGGCTTTGTGCACTTGGTGCAAAAATATAAAGTGTATTAGCATCATATACAACCTGAAGGGGAAAAGAA ...........:.:x...:........x.:....x........x...x...........:........:..........:x.......:..:x::..x.:.. 102M 82/102 80.4% 102/94230402 0.0% 0/102 0.0% 22357606 NA +8275 chr4 + 190214555 48176048 48176047 48176215 168 AGCACTGCACTGCCACAAAAATACACCAGCTCACCTGAAATGGATACTTATTTTGACAGGGAATGACACCATCATCATTCTTCACTATTTCCACACACTTGATTTTTGAAACATCAATAAACCCCTTTCTGTATTTCTTCTGTTAAAAGAAAAAAAGGAGAAACATTA chr4 - 94230402 25814532 25814531 25814696 68415707 68415706 68415871 165 AGCACTGTATTTTATATAAACCAAAGAAGCATACCTGAAATGGATATTTATTTTGACAGGGAATAATAC---CATCATTTTGCACAACTTCCACACATTTAATCCTTGAAATATCCACAGATCCTTTTCTGTACTTTTTCTGTAAGAGAAAAGTAAAAAAAAACATTA .......:.:.x:xxxx...x:.x.xx...x:..............:.................:.:..---.......:.x...x.:.........:..:..::......:...x.:.:.:..:........:..:......x.:.::...:x..::.:........ 69M3D96M 122/165 73.9% 165/94230402 0.0% 3/165 1.8% 22361516 NA +4219 chr4 + 190214555 48178461 48178460 48178556 96 CTCACAATATCCCTGTGAGGTACACA----TTATTCTCCTCATTTTACAGATGAGGAAACTGCAGCTGAGACAAGTTATGTACATTACCCAGGCCCTGAG chr4 - 94230402 10729167 10729166 10729266 83501137 83501136 83501236 100 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGG .........:............x::.----:...:xx.::..........:..:.:......x:..xx.x...:....x...xx..:.....:x:...:. 26M4I70M 69/96 71.9% 100/94230402 0.0% 4/96 4.2% 37449294 NA +3144 chr4 + 190214555 48179275 48179274 48179402 128 AATGTGCCCAAGTTTACT-----TGTGGAACAGACTGACATAGCAACTATCATGTAATGACGTGGGTAGTA-TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTCA chr4 - 94230402 4200196 4200195 4200329 90030074 90030073 90030207 134 AATGAGGCTAAATTTACTGTAGTTGTGGGGCAGTCTTAAAGCATGATTTTTACAATGCTACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCA ....x.x.:..:......-----.....::...x..x.x.xx:::.:.x.:.::xx::x..:.xxx..x:.-..x.xx..x............:.:.:.........x....::...:xxx.......x..... 18M5I48M1I62M 83/128 64.8% 134/94230402 0.0% 6/128 4.7% 43979079 NA +3496 chr4 + 190214555 48179309 48179308 48179391 83 ATAGCAACTATCATGTAATGACGTGGGTAGTATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681901 8681900 8681983 85548420 85548419 85548502 83 ACAACAACTAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .:.:......xx...x.xxxx.:..xx.::....x..........:...::.:.:.:...:.....xx.:............. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 39497408 NA +3388 chr4 + 190214555 48179340 48179339 48179393 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 39497410 NA +3320 chr4 + 190214555 48179343 48179342 48179401 59 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 92735348 92735347 92735406 1494997 1494996 1495055 59 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCC .::....x.....:...:..:.:..........x....:.x.........:.x...::. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% -44556005 -49674397 +3596 chr4 + 190214555 48179345 48179344 48179401 57 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 92735348 92735347 92735404 1494999 1494998 1495055 57 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTC .::....x.....:...:..:.:...............:.x.........:.x.... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% -44556003 -49674399 +3123 chr4 + 190214555 48179347 48179346 48179398 52 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .::....x.....:...:..:.:........x......:.x.........:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -44556001 -49674401 +3595 chr4 + 190214555 48184163 48184162 48184248 86 AATTACTGTCACCCCCATTTTGCAGATGGAGAAATCAATACATAGAGAGTATAATTAACTTGCCCAAAGTC---ACACAATAATCCAGG chr4 - 94230402 10729192 10729191 10729279 83501124 83501123 83501211 88 AATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAG-AATCCAGG .......:...x.:.......:...:...::...:::.x:..:.x.x..xx...x...:.......:....---::...:-........ 71M3I6M1D8M 62/85 72.9% 88/94230402 0.0% 4/85 4.7% 37454971 NA +3053 chr4 + 190214555 48222230 48222229 48222301 72 TGAAAGGGCAACTGTAAGTAGGAGACACAGCCAGAAGAGGAGGAAGAGGAGAAGAAGAAAAAATTGCATCAA chr4 - 94230402 57329399 57329398 57329470 36900933 36900932 36901004 72 TGAGATGGCCACTAGACTGACAAGAAAAAGCCAGAAGAGGAAGAAGAGGAAAAAAAAAAAACAAAACAGCAA ...:.x...x...:x.xxx.x:...x.x.............:........:..:..:....x.xx:..x... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% -9107169 -85123233 +3012 chr4 + 190214555 48225138 48225137 48225194 57 CACAGATTACTCATGTCACATCCTTTTTTTCTCTTTCTTTTTTTCTTTTCCTTTTTT chr4 - 94230402 44808483 44808482 44808539 49421864 49421863 49421920 57 CACAGAATATGCAGAAGGCATCTTTTTTTTCCCTTCCTTTTTTTTTTCCCCTCTTTT ......x..:x..x:xx:....:........:...:........:..::...:.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 3416655 NA +10623 chr4 + 190214555 48228467 48228466 48228679 213 TGTCTCTTACCTCTGCTCGACCCTCATAGTAGGTTAGCATGGACTTTGTAAGTACAAAAAGTCTCTCTTTGTAGTTTAAGGGCGATGTCTTCTTTTTCTGCTGTGACCTTTTAATAAGAATCTCCTCCAAAATAGTGTTAAAATTCATCTCCGTCTTCTGATTACTC---CTCCTGCCACTGAAGATCCCAGTATTCTACAGTGAAAAAAGAAACA chr4 - 94230402 25826149 25826148 25826361 68404042 68404041 68404254 213 TATCTCCTACCTCTGCTCGACCTTCATAATATGTTAACATAGAATTTGTAAGTACAAAAAGCCTCTCTTTGTAGTTTAAGGGAGAAGTCCTCTTCTTCTGCTGCGACCTTTTAATCAATATCTCTTGTAGAATAGCAGTCATATTCATTTCAGCCACTTGTTGCCTCTGTTTCTAGCCATTGAATAT--CAGT-TCCTGTGAAGATGAGAGAAACA .:....:...............:.....:..x....:...:..x.................:....................x..x...:....:........:...........x.:x.....:.x:.:.....::x.x.x......:..x.:.x::..x.xx...---:..:x....:....x..--....-.:..::::x..x:.:....... 167M3I17M2D4M1D22M 161/210 76.7% 213/94230402 0.0% 6/210 2.9% 22402318 NA +4921 chr4 + 190214555 48228489 48228488 48228605 117 CTCATAGTAGGTTAGCATGGACTTTGTAAGTACAAAAAGTCTCTCTTTGTAGTTTAAGGGCGATGTCTTCTTTTTCTGCTGTGACCTTTTAATAAGAATCTCCTCCAAAATAGTGTT chr4 - 94230402 92218391 92218390 92218507 2011896 2011895 2012012 117 CTCGTAGTAGGACAGCTTGCTCTCTGTCAGCAGAAACAGGCGCTTCTTGAAGTTGAGGGGAGATGTTTTCTTCTTCTGCTGTGAGCGCTTCAAGAAGATGCTCTCCAGGATGATGCT ...:.......x:...x..xx..:...x..:.x...x..x.x..::...x....x.:...x.....:.....:...........x.x:..x.x:.::..x::.....::..::..:. 117M 80/117 68.4% 117/94230402 0.0% 0/117 0.0% -43989902 -50240500 +3169 chr4 + 190214555 48265368 48265367 48265434 67 GAGATAGATATATATATATATGTGTGTGTATATGTATATATATACACACACATATATATACACACAC chr4 - 94230402 14964818 14964817 14964884 79265519 79265518 79265585 67 GACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:.:....:.x.:::.:..:::::..:..........:.xx.........::.:.:........ 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 33300550 NA +3031 chr4 + 190214555 48265403 48265402 48265467 65 ATATATATACACACACATATATATACACACACACATATATACGTATATATATACATATATACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:...::.....:.:...:.........:..x..x::x:.x:.:......xx:....:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -18639444 -75590958 +3030 chr4 + 190214555 48265405 48265404 48265472 68 ATATATACACACACATATATATACACACACACATATATACGTATATATATACATATATACACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x.::..:...x..:....:......:...:.....:x.:.....:x:.:::.::...:.x... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 40668992 NA +3202 chr4 + 190214555 48265406 48265405 48265482 77 TATATACACACACATATATATACACACACACATATATACGTATATATATACATATATACACACACATATATACGTGT chr4 - 94230402 27943552 27943551 27943628 66286775 66286774 66286851 77 TGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .:..:...::....x:.:.::.x.:.::.....:...::.:x:......x..x..:.x....:....x:.:...... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 20321854 NA +3050 chr4 + 190214555 48265426 48265425 48265496 71 TACACACACACATATATACGTATATATATACATATATACACACACATATATACGTGTGTGTATATATGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...:::..::......:..::.:.x..........x.x:::.::...:.:.x:.::....x....:..... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% -23364709 -70865693 +3624 chr4 + 190214555 48265443 48265442 48265531 89 ACGTATATATATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTTG chr4 - 94230402 71630132 71630131 71630220 22600183 22600182 22600271 89 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTG ..x..::.::..:......:.......x.....:.::.x.x.....::......x.::..:.:x....:.:.:.:..::.xxx...:.. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -23364689 -70865713 +3129 chr4 + 190214555 48265448 48265447 48265524 77 TATATATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATATATATATATATATATTTTTTTTT chr4 - 94230402 71630135 71630134 71630211 22600192 22600191 22600268 77 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCT ..::.::.:::.............x......:.:.x.x.:...:::.....x.::..:.:x....:.:.x.:..::. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% -23364687 -70865715 +3235 chr4 + 190214555 48265453 48265452 48265516 64 ATACATATATACACACACATATATACGTGTGTGTATATATGTGTGTATAT-------ATATATATATATAT chr4 - 94230402 61485373 61485372 61485443 32744960 32744959 32745030 71 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGAT ...:.:...:.:........::.:..x.........:.....:.x.....-------..:....x...x.. 50M7I14M 50/64 78.1% 71/94230402 0.0% 7/64 10.9% -13219920 -81010482 +3116 chr4 + 190214555 48265475 48265474 48265525 51 ATACGTGTGTGTATATATGTGTGTATATATATATATATATATTTTTTTTTT chr4 - 94230402 42757855 42757854 42757905 51472498 51472497 51472548 51 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTT ...:....:x............x.......:.....x..:x.....::... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 5507620 NA +3022 chr4 + 190214555 48265484 48265483 48265530 47 TGTATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735394 1495009 1495008 1495055 47 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTT ..:....x.:.:.....:..:.:...............:.x...... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -44469864 -49760538 +3091 chr4 + 190214555 48265484 48265483 48265532 49 TGTATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTTGA chr4 - 94230402 8681937 8681936 8681985 85548418 85548417 85548466 49 TATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA .:.........:..:.:.:.:...:.....xx.:............... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 39583547 NA +3203 chr4 + 190214555 48326394 48326393 48326478 85 AAAAAAAAAAAGAAAGAAAGAAAAAGAAAAACCCTCTTAAAAATAGAATAAACATTTATGCTTGGGTGGGAAGGGA----ACATTATTT chr4 - 94230402 85934331 85934330 85934419 8295984 8295983 8296072 89 AAAAAAGAAAAGAAAGAAAGAAAAAGGAAAATTGAAGTCAAAACAAAGAAACTATTTTTACATTTATAGGGAGAGAAAGGACAATATTT ......:...................:....::xxxx.x....:.:.:x..x:....x.:.x.xx:.:..:..:..----...x..... 76M4I9M 60/85 70.6% 89/94230402 0.0% 4/85 4.7% -37607937 -56622465 +14904 chr4 + 190214555 48341588 48341587 48342175 588 GAGGTGGGGGGACCCTGGCGGTGGGGCCTGGTCCT---GCTATATGCCGGCGCCTCGGCTAGAGTGAGCGGCGGCGAC------GCCTCTTTCCTCCGTCTCTTTCCC-TGTCGCTGCGAGAGCGAGC---------GGGCGGCGGAGGCGGC------------GGCGGCGGCGGGGCCGGGA-------TGGAGGACGTTAACTCCAACGTGAACGCGGACCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAGCTGAGGAGCCGCTCGGGGGCCGTGCAGGGCGCCGGCTCCCTTGGGCCCGGCAGCCCGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGCGCGGCGTCTCCTCGGGGCTTCCCCTTGGGCCTCAGCGCCAAGTCGGGCGGCGGGCCCGGGTCGGGCCCGAGGCGGACGAGTAGCGAAGAGCTGCGGGACGCCACCTCCTTG------CTAGCGGCGG-GCGAG-GGCGGCTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGGAGCGCCTGTCAGGCTGGGAGGAGGAGGAGGAGAGCTGGTGAGCGCGAGGCGCCGGGCAGGAGCTGGGCGGGGACGGGCCCGGGG chr4 - 94230402 25859004 25859003 25859580 68370823 68370822 68371399 577 GAGGAGGCGGCAAGATGGCGGCCGGATGCGGGCCCTACGCCGCCCGCCGGCGCC---GCT-GAGAAGGCGGCAgcgcccgacccgccccgccccgccgccgccctccagtgccgcgggccgcccggccATGTAGACGGGGCGGCGCGGCCGGCCTTCCCCGCTCAGACAGCCTCGCAGCCGGCAGGCGCCATGGAGGACGTCGGCTCGAGCGTGAACGCGGACGCGGAGGTGCGGAAGCTGCAGGAACTGGTGAAGAAGCTGGAGAAGCAGAACGAGCAGCTTCGCAGCCGCCACGGCGCCCTGCC---CGCCGCCCCCGCCAGCCCCAAGCGCCTCCTCAGCGGCGGGGCCTCCCCTTCGCCCCCCGCCGCCGCCGCCTCTC----CCTCTCC-----------------GTCCGACGGCCG--CTGCCTCAGCCCCAGGGC---------------CGCGGCACGGCGGCAGCCCCCCGAGGAACCCGGCGGCGGTGAGAGCGACGGCCTCCTGGACGACGCGGCGCCTCTCCGGCCCGACGAGCTGGAGCGCCTGGCCGGCTGCGAGGAGGACGAGACCGGCTGGTGAG---GAGG---------GGAGGCAGGCGGGGAGCAGCCCGAGG ....x..x..x.xxx......:x..::x:..x..:---..:::x:.........---...-...x::.....:...x.------...:.x::..x...:.x.::...x-..:...x.xxx.xx..:x.---------........x:.x....------------.:.:..xx..x:.....x.-------..........:::...x.:.............xx.....................:.............................:.....xx.x......:xx..x...x...x---.....x.:..x:::.x...::xx...:xx.:x.x.x...x..x...x:.:.x:..:...x...x..xx.::...----.:..:..-----------------...x.:....x.--.:.xx..:.x...::...---------------x..x..:x.:..x..x.:..::.------.::.......-.x...-.:....:.x........x.:..x...x..x........................x.x.....x........x...:xx:.........---....---------....x::........xx:.....:.. 35M3I16M3D3M1D17M6I24M1I19M9I16M12I19M7I115M3D74M4D7M17D12M2D18M15D23M6I10M1I5M1I88M3D4M9D26M 380/531 71.6% 577/94230402 0.0% 103/531 19.4% 22482584 NA +4786 chr4 + 190214555 48341757 48341756 48341836 80 CAACGTGAACGCGGACC---AGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAGCTGAGGA chr4 - 94230402 82921401 82921400 82921483 11308920 11308919 11309002 83 CGAGGTGGGCCCGGAGCTGGAGGAGGTACGGAAGCTGCAGGAGCTGGTGAGGAGGCTGGAGATCCAGAACCAGCACCTGAGGA .:.x...::.x....x.---.......:......................:..:........xx......x.:..x....... 17M3I63M 66/80 82.5% 83/94230402 0.0% 3/80 3.8% -34579644 -59650758 +10433 chr4 + 190214555 48369835 48369834 48370003 169 TTGTCTTCTTCT-AGGCTGTATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCATTAGTTTGGTGCAGGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAGTGTGCTAAAAAATCTCTTATCCACAAACTTGATCAAACTATGTCAGGTATGT chr4 - 94230402 25867723 25867722 25867892 68362511 68362510 68362680 170 TTTTCTTCTTTTCAGGTTATATACGTCTCCAAAGAAGAGACTGACTCCAATGCAGAAATGCGTCAGCCCATTAGTTTGGTGCAGGCAGGTGTTGGATTACCCAAGTCCTGACATTGAATGTGCTAAAAAGTCGCTGATCCACAGGCTGGAACAGACAATGTCAGGTGAGT ..x.......:.-...:.:...x.:..x........:.:...x..x.............xx..:..:....................:..x....................::....:...........:..x..x.......::..x..x..:..x.........:x.. 12M1I157M 138/169 81.7% 170/94230402 0.0% 1/169 0.6% 22502112 NA +3805 chr4 + 190214555 48371958 48371957 48372082 125 AACAAAAAGTATATACACACACACAC---ACACACGCGCGCACACACACACACACACATATACATA----------TATACACATATATATACATATACATATATACATATATATATATACAC------ACACACACATATATA chr4 - 94230402 73121066 73121065 73121209 21109194 21109193 21109337 144 AACTGAAACTGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...x:...x.:..:..x....x.x..---.xx.x..:.:...::..:.:x..:...........:.----------..:.:..:....x:....::x::....:.:x:..:.....x....:.------.x........:.... 26M3I37M10I47M6I15M 86/125 68.8% 144/94230402 0.0% 19/125 15.2% -24749108 -69481294 +3578 chr4 + 190214555 48371980 48371979 48372082 103 ACACACACACGCGCGCACACACACACACACACATATACATATATACACATATATATACATATACATATATACATATATATATATA---CACACACACACATATATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ...:.:.:..:.:.:......x:x...:..:...:x:x:.x.::...::...xx.x:...x..x.....:......x...x....---....x....xx.:..... 85M3I18M 69/103 67.0% 106/94230402 0.0% 3/103 2.9% 43954631 NA +3297 chr4 + 190214555 48372005 48372004 48372092 88 CACACACATATACATATATACACATATATATACATATACATATATACATATATATATATACACACACACACATATATATCCCTAGAAA chr4 - 94230402 8395787 8395786 8395874 85834529 85834528 85834616 88 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ..::::::...:::.::...x....:...x.......::..::x.....xx...:.:.:...........x.:.:.x..xxx..:... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 39976218 NA +10618 chr4 + 190214555 48377850 48377849 48378065 216 TTTTTCTCAGTTGTTA---------AATTTGATTTTCCCCTTCTCATTAATGCAGCTCTCAAGAGGCAGAATTTATATAATAATCCTTTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAAG chr4 - 94230402 25868873 25868872 25869097 68361306 68361305 68361530 225 TTTTTCTTGTTTGTTCCTGTATTACAATTTGTTATTTTCTTCCTCTTTGGTACAGCCATGAAGAGACAGAGTTTGTACAATAGCCCTTTCAGTGCAGTCAGCTATGCCAGCTCCTATAGTCCAAATACCAGTAGCCCCTACAGTAGTGGTTTCAACTCTCCCTCCTCAACACCAGTGAAATCTGCATTAGTGAAACAGTTCATATCTCCGGGTACCTCAGGTAAG .......::x.....x---------......x.x..::.:.:...x..::.:....:x.x.....:....:...:..:....::.......::x.x:.x..:..::....::.:..:.........:..........x.....:.....:.....:.....x........x......x:.:..x.xx....x......:.:...::...x..x.x:......... 16M9I200M 158/216 73.1% 225/94230402 0.0% 9/216 4.2% 22508977 NA +12315 chr4 + 190214555 48379643 48379642 48379857 215 TAGTTGCTTTACCAGAGTTTGAATTTTTTTCTTTTTTTTTTTTTA-----------------------------AGGTAACTTGAAAAGCTCAG---ACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGGATGCAGGAAGAAAGTAAGTATT chr4 - 94230402 25870301 25870300 25870547 68359856 68359855 68360102 247 TGGTTCTTCTACCAGGATATGTATCTTTTTTTTTTTTTTTTTTAACATCTTCTATTACTTTATGTTCTTTCTATAGGTCATCTTAAAAGCTCAGCTGATAGGAATCCTCCACTAAGTCCACAGTCCTCTGTGGACAGTGAATTAAGTGCATCAGAGATGGATGAAGACTCTATTGGATCTAATTACAAGCTAAATGATGTTACAGATGTGCAAATTTTAGCACGAATGCAAGAAGAAAGTAAGTATT .:...x:.:......::.x..x..:.....:............x.-----------------------------....x.::.x..........---.:..:...........x.....x.........:.:..:.....:........x.....:x.:........:..x........:.....:..............x..x.....:..:...:....x..:.....:................ 45M29I20M3I150M 176/215 81.9% 247/94230402 0.0% 32/215 14.9% 22509342 NA +25128 chr4 + 190214555 48382553 48382552 48382931 379 ATTCATTGTTGCCAGGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCACCTCGTTCACGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGATTTACAGACAAGCAATGTTAAAAATGAAGGTAA chr4 - 94230402 25871315 25871314 25871693 68358710 68358709 68359088 379 ACTCACTGTTGCCAGGCCTCCGGCAAGAGTATGCAGCATCGGCTTCTCGGCGTAGTTCTGGTTCTTCTTGCAATTCTACGAGGCGAGGCACATTCAGCGACCAGGAGCTTGATGCACAGAGTTTAGAAGATGAAGAAGATGGCACACATCACACAGTGCACCCTGCCGTCAGCAGGTTCTCACCGTCACCTCGTAGCTCTCCCTGGCCTTCACCAAAACAGTCTCCAAGGAATTCTCCTCGTTCCCGATCACCTGCTCGAAGTATAGAATACAGTAGAGTGTCACCCCAACCTATGATTAGCCGTTTACAGCAACCTCGTCTTTCACTTCAAGGCCATCCTACAGACATGCAGACCAGTAATGTCAAAAGTGAAGGTAA .:...:..........:...........:........xx.x:.x........:...........x..............:..:..:..:..x..:..:..:.....:...........:........x........x..::::.::.....::....::.......:..:.:......:.....:.....x..:.::..x..::.:..x.....x..:.....x..x..:.....x........x.....x........::.x........:...........x..x..:..............:..............:....................:.....:x.:.....x..:.....:....:......... 379M 307/379 81.0% 379/94230402 0.0% 0/379 0.0% 22511238 NA +11753 chr4 + 190214555 48383644 48383643 48383820 177 CAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTAAGTATCCTTCTTATGCTTTCATGTATCAGTTAT chr4 - 94230402 25873840 25873839 25874016 68356387 68356386 68356563 177 CAGAAAAACTAAGGCGTAGTCTTCCAAACCTGTCCAGGACATCAAACATCCAAGCTGAGTCTGTGAAAAACAGCAGAAGTGACTCAAACTTCCAAGTGCCAAATGGAGGAATACCTCGCATTCAACCTCAAGCCTCAGCCAGTAAGTACTTTCCTGATATTTCAGTGGATTGGATAT .............:..:..................x.:.....x..:.:x....:...x..x.......:..................:..:...........:..............:..x........:..:..............:::.:..x..::..:x:..x..::.x... 177M 144/177 81.4% 177/94230402 0.0% 0/177 0.0% 22509804 NA +3125 chr4 + 190214555 48390038 48390037 48390098 61 GAGGGTGATGAGATCTGGATGAATTTTGTTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTTT chr4 - 94230402 50095574 50095573 50095634 44134769 44134768 44134829 61 GAAGGTGACTGGTTCAGAATAATCTTTGCCTCTTTTTTTTCTTTTTCTTTTTTCGTTTTCT ..:.....:x:.x..x.:..:.x:....::.::....................:x....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -1705536 -92524866 +3142 chr4 + 190214555 48390044 48390043 48390103 60 GATGAGATCTGGATGAATTTTGTTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTTTCCTGA chr4 - 94230402 16595566 16595565 16595625 77634778 77634777 77634837 60 GGTGATTTCTGTATGACTTTTGTTTGCTTGTTTTCTTTTTTTTTTTTTTGCATTTTTTAA .:...xx....x....x........x...x..........:........x:x...::.:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 31794478 NA +8918 chr4 + 190214555 48394238 48394237 48394710 473 GTGTTCATCACTTTTTTCT----TTGTATTCTTTGTATCCCTAGCATGTTTGT-GGTGGTTTGTTTTCTCTTTGATAT-------------TTTGACCAATAGACATATTGGAGATTTTCTCACCTGTAAGAA-----ACTCTT--------------TTTTAAAGTTTATGTTCTATCCCCTTTTCTTTCCAACTTAATGC-------ACTAAGCATCACTTTAAAATTCTTTTGCTTCTAGGATTCTAACATATTT----GCACCTTATGGCTTCTGTTCTTTGATACATTTTTAAGTTTGTATTAAAACATTC--AAGTTTACAGACGCTGTAGCCTTTGTCTTGTACTTCCAGGCAAATATTACAGTTCCTTATTTTTCAACAGCTTCGCAAAGGCTGAAAAATTTGCCTCGCACTTCCCTCAAAGCCAAACAGTTGCTTCAAACTTCATCTACAAAAAGAGGTAA-----CTACAGCCTCTTACTCAGTTT---AAAATTTCAGCAAATGATCTA-----GTTAAATCTTA chr4 - 94230402 25878283 25878282 25878801 68351602 68351601 68352120 519 GCGGTCATCATTATTATCTGATCTTGCACTCATACTG-CTGTAGCATGCTGCTAGGTGGCTTGTTCTCCCTTTGGTGTATTTGTTTGTTTGTTTGGTT--TTGCCTTTCTGGGCGTTTTGCC--CCGCAAGCAGCTTCACTCTTACAGAACCTGCGCATTTTGCACTGCAAGATTCCTTCACGCTTCTTTGTAACTCTCGGCCATTAAGAGCAAGCACCG-TTTAAAAAGCCATCACTTTCGGAGTCATAACAGCTTTTAGAGTGTTTTACTCACTCTATTCCTTAAGC--TTCACAAGCGGATGC-----CATTCTGAAATTCCCAGTAAATGCAGCTTA---CTTATCATCGTAGACAAATATAACACTTC-TTGTCTTTCAACAGCTCTGCAAAGGCAGAAAAATTTGCCTCGCGCGGCCTTCAAAACCAAACAGTTTCTTCAAACTCCATCTGCAAAAGGAGGTAATGAACTTACAGCCTCTTATTGAGCTCCAGCAAATCTCGGATAATTGTTCACCTGCATTAAATCTCA .:.x......:.x..x...----...:.:..x.xx.:-.:x.......:.xx.-.....:.....:..:.....:.:.-------------....:::--.x.x.x.x:...:x:....x:.--.:.:...x.-----......--------------....:x.x.x:.x.x.::x.:.x.x:......x:....:xxx..-------.x:.....:.:-.......xx.:x.::...:::.::.:x.....xx...----.::::...:xxx:...:...:..:.xx--..:x:...:xx:.::-----.....--..:..:x...xx:x..:...:.x---...:.xx.:x:..:.......x...x...-..:.:...........::........x................:.xx..:.....:..........x.........:.....:.....:.......-----:............:.x..:.:---x....:..:.xx...x:.::.-----:........:. 19M4I14M1D15M1I24M13I7M2D22M2D9M5I6M14I44M7I11M1D37M4I27M2D15M5D5M2I23M3D29M1D96M5I21M3I21M5I11M 308/456 67.5% 519/94230402 0.0% 80/456 17.5% 22515955 NA +3326 chr4 + 190214555 48406484 48406483 48406543 60 CTGAAAACAATTTTTACAACTTTTGGTTATGCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 50117628 50117627 50117687 44112716 44112715 44112775 60 CTGGAAATGTCTTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:...::x:..::.x:...x.xx:....x............................. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -1711144 -92519258 +3448 chr4 + 190214555 48410221 48410220 48410313 93 CATTTGTATATCTTCTTTGGAGAAATGTCTATTCAAATTCTTTGTCTCTGTTTTTTTAGTTTTTTTTTTTTTTAATTGAGTAGTCACATTCCT chr4 - 94230402 38448701 38448700 38448793 55781610 55781609 55781702 93 CATTCATAAATTTTTTAAAAATACATGTTCACTCAAGTTCTGTTTTCTCATCTTTTTGTGTTTTTTTTTTTTTAATTGACTGAAAACATTTTT ....::..x..:..:.xx::.x.x....::.:....:....x.x.:::::.:.....:xx...................x.::xx.....::. 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 9961520 NA +3617 chr4 + 190214555 48412329 48412328 48412425 97 AATCTTAATAGTTCCTGTAATG-TATGTTTGTATATGTACACACACACACACACACACACACACA------CACACACACACACACACACACACATTCCCTCTC chr4 - 94230402 66904818 66904817 66904920 27325483 27325482 27325585 103 AATCTTGCTGGTTTC-GCACTGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTC ......:x.:...:.-.:.x..-.:.x..::.........::.........:...........:.------:x..x::::.:...xx..:..:....:...... 15M1D6M1I42M6I33M 69/96 71.9% 103/94230402 0.0% 8/96 8.3% -18492489 -75737913 +3031 chr4 + 190214555 48412347 48412346 48412402 56 AATGTATGTTTGTATATGTACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395807 8395806 8395862 85834541 85834540 85834596 56 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..::.:.:...::.......::.x:...:xx.:.................x..... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 40016540 NA +3088 chr4 + 190214555 48412348 48412347 48412414 67 ATGTATGTTTGTATATGTACACACACACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 33416688 33416687 33416754 60813649 60813648 60813715 67 ATGAATTCTTGCATGTTTACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACA ...x..x:...:..:.x...:..:x.x..x.........:.........x:x......xx.x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 14995660 NA +3271 chr4 + 190214555 48412351 48412350 48412409 59 TATGTTTGTATATGTACACACACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ........::.:..:....::::.:::.:.:...xx........::............. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 33447525 NA +3107 chr4 + 190214555 48414161 48414160 48414213 53 CATTATGCCTGACTCGAGTGTAATTCTTGGTATTCAAAAAGAGTAAAGAGAAA chr4 - 94230402 91561853 91561852 91561905 2668498 2668497 2668550 53 CACTGTGCCAGCCACGAGTGCAAGTCTTGGTATTCCAAAACAGCAAGGAGAAA ..:.:....x.x.x......:..x...........x....x..:..:...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -43147692 -51082710 +3646 chr4 + 190214555 48418073 48418072 48418187 115 ATTTCTTCTT-CTTCTTCTTCCTCTTCCTCCTCTTCCTCCCTCCTTCCTCCTTCTTTCTCCTTCCTCCTTCTTTCTCCTTCCTTCTCCCTCTTCTTCTTTTTTTTTTTTCTTGTTT chr4 - 94230402 92912891 92912890 92913005 1317398 1317397 1317512 115 ATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCT-CCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTT ........::-...x.x..::.......::.:..-...xx...x..:.:x.....:x:.::xx.:x::.::......:......:...:.....:...xx.:..x..:.x:.:... 10M1I23M1D81M 74/114 64.9% 115/94230402 0.0% 2/114 1.8% -44494818 -49735584 +20061 chr4 + 190214555 48420122 48420121 48420450 329 CAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGTAACCATGGCTCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCTCACACAAACCACCTCCTCACCTGGGCCTCCTATGGTTCAGAGCACAGTCTCAGCAAATCCTCCCAGCAATATCAACAGCGCTACTCTAACCAGACCTGCAGGGACAACTGCAATGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTG chr4 - 94230402 25883448 25883447 25883776 68346627 68346626 68346955 329 CAGTACCTTCTTCAAGTAAATTCCGCTCACCTGCAGCACCATCTCCCCTCGCTCTGCGACAACCGGTGAAGGCATTTAGTAACCACGGACCTGGTTCTGTTGCTCCTCTGGAAGCCACACAGCTGACACACAGCAGTTCTTCACCGGGGCCTCTTGCAGCTCAGAGCTCAGGCTTGCCCGGCCCTGCCAGCGGTGTTAACAGCACCACCCTCACCAGGCCGGCAGGGACAGTGGGGATGAGGAGTAGTTTGCCCAGACCCAGTGCCCCTTCCACAGGGGGCATCCCAGTGCCTCGTAGCAAACTTGCACAGCCTGTCCGCAGGTGAGTG ...........:..:.:........:..x.................::.x.....x..:.....:.....:..............:..x:........x:..x.xx:.x:...::x........x.....x.x..x:..:.....x.......:.:::.:.......x...x..::x.x:::...x.....::.:.:......:.:..:..x.....:..x.........::x.x:.....:...:.:.......................::.x........x...........:....................:.......:.... 329M 256/329 77.8% 329/94230402 0.0% 0/329 0.0% 22536674 NA +45905 chr4 + 190214555 48422001 48422000 48424642 2642 TTTATTACAGATCCTTGCCAGCTCCTAAAACCTATGGTAGCATGAAAGATGACAGTTGGAAAGATGGCTGTTACTGACCAGCAAAGACAAGAATGCAGAAGTCCACGGCTTCATGGATAC-CCTTCACCAGGCTAAAAAACAACTTTTATATGCAGACTGTTCAGATAAGACTCTTGGGATTTATA-AAATCCCAGCCCTCTCTGTCT-TAATTAGCACAAACCGACAGAGATCATCAAACAGCACTTTAATGACATTTAACATCAGATGTGTTTGGTAATCATACAATCACTCTC-CATAGAATCACTTTTAGTTTTGTTTAATAG------------------AAACTAGGTTGATTTTTAAAAAATATTTGACAGAGGCCAATATCTGGGCAAATACCTAATGGATGCCAAAGAGAAATGCCCATTTGTAAATGAGAAAAATGCCCATTTGTGCACAAGAAAATGGTGAATTCAGGCTATCCAAAACTTCACATTCAACCTAATTTACTGTATAAATAGTATCAATAAATATTTGTGTTAATGAGA---------ACTAATATTCTGACT--AATTATCTAAAGTGTTTCACTAGTACACCAGGAAACTACAGATTGAGATTAGGGGGTGGGAGGAAAGAAACCTGGGCTAGAGATTAAAACATTCCTAAATTTAGCAGAATTTCAGAAATGATTTTTGCAGATTCATTAGAAAAGAAAAA-------TTGTCATTTAAT----CTTAAGTTTTGGATGTAGCTCACATGTCACCACCACCAGATAGTGT-TACAGCATGTATCCATCATGTTGCATTGACACATCAAACTTGTGTGTGTTTG--TTTTGATTGCCAAAAGGGCTTAATATCAGTTGTACAATCTTTCTGAACTTTATAGTTCCTGGCTCAGGAAAGATGGCCTTTGCTATTGAAGCCAACTTCTTCACATGCTGTTATCTTTACAGAACTAAGAGATCTTGTTTCTATTAGCAGGTTTTCATGATAGGAAAGAA-CAAGTAGT-GTGTGTCTTTATTCTTGATACAACACCACCTCGGTGCTTGCAACCTGGAACAAAACCATA-----CCATGAGAGA-GAGGGGGAAAAAAATCTATGCACT--TAACCTACAAAATCTCTGGTGATGACAGTTGTATTGTTGCTATTACATGGCA-----TAACGGTCTATTATGTGGTAGGAAAATATAGCCTGCTAAATCCTA---------------------CTTAAGTTGATCCACTTTAAACTG--AGTAACTGTATAAAACATCTAT----TGAAAATTCTTTTCCTTTTGACTTAGATTCTGCCTTACATCAAT---TTTTGCATTTTTGGTAAAAAAA---AAACCCTACTACGTATGACTCTAACCTGATACTTG---CTCTCTAATGGCTCTTAATATATCCTTGAAATCGGCTATTTCAATTTTATCAGACTTTTACCAGAGTAAAACTTGCTTCTGTAGCAGGCCTCTCATTTTTTATTATGAGGTCTGTTTTTAAATACTTAATTTGAACAGCTCTAAGATATTGTCACTTAGGTCATCTAAAAGCTTTTAGAG-----ATTTGAACATAAGTTCATTTCCTGTTAATCAAAGACATTCCGTAAGTTG--------GCAAAAGAAATTGGGAGAGAGAAATAGAAGGCTTGATAT----TCTGGACAGCATT--AAGGTTGATAGGTTGAT-GAT---------------AAAAACTTAAAACCAGGACCTCCATTCTGTCATGACTGACACCATGGTAGTCTGTCAGCTTGACCAG--TGGAGAGTCATTCA-------TTTAGCACAAGCAGCTGGAGATT------TAAACTGC----CAGTACTATGTATTTGGTGTATAATGCAAGGAAGAAA-----------------------CTTTATC-CTTGA--ATTTGAGGGTGATGGGGTGGGTCAGGAAAGGATG---GCGCCAGA--ATTCTACATGATAA-----------TGAACTAAAAAATGTTGC-----------TTTTCAGAGGAA-------GATAAAGCATCTT---CTTTTG-----------------GGA----GGGGGGTATCTCATGTCTAAG-TAAGTAAAAGAAAGAAGTAGCTACTGTCTCTTTTAAAAACCACGTACAAAACAGAACAAGTCTCAGTTTTCAGTGCAACATTTCAAAAAATATATATGCTGCAATCTAATAATTAAAAGGAA-----TTTTACCTA-------TTATGAAACATATTA---CATTTTTTAAGTTAGATAATCAGTTTCAAAAGGAGTATTCAGGTTATTTAACTTTGTTTTTAAATGGCTGCATCAGAAAAAAATGTCTATTTTTT---TTTATTAAAATATTTCATCACTTGTTAAAACATATTTTTGATCTGAGTTTGGTAAAGTATTATTTTACCTGCTGTTGTACTACCACAGACTGTTGACTTTTAGTTTCTTAAAGAGAAAAATTGCCTTTTTACTAGAAAGCCTTTGTATATTGCAATTTTTCTG-TTTGGGAAAATCTAAGGATTTACTGTGGTTAG-----TCTTACAGAA-----GAAATGTGGATTTGATAAACTAGTGCCTATGATT---TTAACTTATGTTTGATATATAGTAGTAAGGGTTTTATGAATGTTGATTA--TTTTGTGCCAACAGCCCAGAATTGTCACTTATATGTAAGCAGAAAACAATGAGCTCTGCTTCCAAAGTTATTTAATTTTCTCAGTGTTTGAATGTTATTTTTTGTAAGTGTGTTAATAAAAGTGTAAAGAATTGGAAAAAATAT---AAATATTCTTAACTC-AAGCATTTGCTGGATCATT-TTTCTACAAAACTTGTTTGTACAATAT chr4 - 94230402 25884764 25884763 25887450 68342953 68342952 68345639 2687 TTTGTTTTAGATCATTACCTGCTCCCAAAACCTACAGCAACATGAAAGACGAGAGTTGGAAAGATGGCTGCTATTGAACTGCAGAGCT--TAATGCAAAGTTCCAGTGC-TCATGGATGCTTCCTCACCAGGCTAACACACAGCTTGATTCTACAGACTGTTCAGATGTGACTTTTGGGATTTGTATAAATTCCAAACCTCTCTGTCTCTAATTAGCACAAGCTGGCAGAGATTATAAAGCAGCACTTTAATGACATCTAACATCAGA--TGTTTGGTGGTCATACAATCACTTTCACATTAAATTGCTCTCAG--TTGTTTTGTAGTTTTTTTTCTTGCTTGCTAAAATGGGTCAAATTT--GAGCATTTATGACAGTGGCCAATGTCTGGGCAAAAACCTAACGAATGCCAA--AGAAATGCCCATCT-TGAATAACAGCAA-----------GTACAACAG------TCACTTAGATTTTCCAAAACTTCGTTTTCAACCTATTTTAATTCAACAGAAGGGTTGGTAAATA--TGTACTATTGAAACGAGACTACATTAACATTCTGATTTCAGACTGCTACAGTGCTATTGAAACATTGCTGTTAACAATTGAATGAGATTCTTGTAGGGGAA----------------AGTGGTACGTACATCCTTCA----GGAAGAA--TCAGAAGCTACTCTGGAAGATGAGGCAGAACAGTAAGGAGTAGCCGTGGCTTTTGGTAACGTTAAAGACTTGAATGTAGCAGACATA-CACAAATGC--AATAGTATAGATGGCATCTTTCC-------TGTGTTGATTTATCAGCTTTACATGCTCTTAGCGCTTGATTGACAAAAGGGCTTAGCATCAGTTGTACAATCTTTCTG-ACCTTAAAGTTCCTGGCTCAGGAAAGATGGCCTTTGCTGTTGTAGCCACGTTTTAAACACATTACTCACTATTTGG-----GGAAAACTT-TTTTTA-TAGCAGGTTTCCTTAAAAAGGAAGAAGCAAGTAGTAACGTTCCTTTGTTC-TAATACCATACCACT---ATGCTTGCAGCCTGGAACACAACTGTAAATGCTGATAGTAGAGGAGAAGGAAACACAACTATGCACTTGTAACATACAAATTTTAAGGTAATG--AGTTG-ACTCTTGATGCCAAATGATATTCATTTAGGTGATGTTCCATGGTATGAGGG---AGTTTTCTGTATCCTATTTTTTTACTTTCATCCATTTCTTAAATTGGTTTATTTTAAATTGTAAATATTTTTACAGAAGGTATTTCCCATGTAAGTAAGTGTGTTTTAAATATGTACTTTGCCTTACATATGTGTATCTTACATTACTGGTAATAGAGTATGAAACCTGCTATGTCTGTTTACAATCT----CTTGAATTTCTCCTGTGGCTCTGA-------CTT----------------ATTCTAACACACATTTTTCTCAGAACAACTCATTTATATAATCAGCATTTGAACCATCATT-----TTCTGTTTCGGAAGACGTCATACAAACA----------CTTGTAACTAAGGTT--------GTATTTGGTGGGACAAGTTAAATGGAAGGGATTTTGTTG------AAGCTTTTTCAGTATGTTGGATGTACAGTCGATGAAATAATGAAGTGTGAATGGTATCCTTTGTGCAATGACTGACAAACACTAAAAGTTGGATCAGGCAATAGATAGCCTTCAGCCCCTGAAGTACCTGAGTTTGGAACTGCTGGTGTACTTTGACTCCCACCA-------CTAAGAGGATAACTAACCCTGAAATTCATGCACGTGAGTTTTAG-GCTAGCACTTGCATATTCCTGGATAAAAAGCCATGCAATACTACTTG--TGTTGGAAGAAGCCAAGCAGAAAGTAGCAGAGACTGATTTGCAGCTCTTAATTACTTGAGCAGCTGTAGGCAAGCTGGAGGTTGATGAGTGACTTCACACTCCAGACCAATATCCGTGCTGAGACTTTGAAATTGGTATCAAATATACTGTAATTCAGTAAGATTTCAGCAGAAGTCACCTGCTGAAACAACCTGGCCTTGTGTCGCTGGCACAGACAGCGGATGTCAGTAAGTGTCTCATGCAGCTGTTAAGTAGAAGAGATGAAATGCACCTGTTCCCATCAAAGAC---------------AGAATTCTGACATGTCAG-----CATTTTACAAAGCA---ATGCTGC------TTCATTGAAAAAAGATTATTTTTAATTGGTGGATTTTATTAAACACCTTGGTTGACTTTTAAACCCTGAAAGTCAGTTTAGATGACACTATTGGGGTTAT---ACC----------ATGGCTGCATCAAA---------CTGTTCTTTACATTTCCTTAAGCAATTCGTTACTTGGGTAAATTCAGCTTTAGTTC--------TTGAGCATTCTTTTCTCTGCTGTTCTACTCCCCCTGAAATACAACAAACAGCTTCCTGAAAAGACAGACTGTCTGTTTACTAGAAAGCCTTTGTGCATTACCAGTTTATTGATATCAGGAAATCATGGGGCT--CTGTGTTTAGAGATTTACTGCAGAAGTGTGGAAATATGGATTTGATAAACTAGTGCCTATGATTTACTTAACTTATGTTTG--ATATAGTAGTAAGGGTTTTATGAATGTGGATTACTTTTTGTGCCAACAGCTCGGAATTGTTGTATGTATGTAGGCAGAAA--GACTCATTCTGCTTCCAAAGTTATTTAATTTTTTT-GTGTTTGAATGT--TTTTTTGTAAGTGTT------AAAGTGtaaa-------aatatatatataaaatattCTTACCACAAAATATTGCCTGCATTGTTATTTTTATAA---CTGTTTATAAAGTAT ...:..x:.....x..:..x.....:........::.:.:.........:..x.................:..:...x.x...:..x:--x......:.:x....xx..-........:.-:.:............x.x...:...xxx.x.:..............:x....:.........:..-....:...:x...........-............:.:.:.......:..x..:.................:..........--........::.............:..-...x:...::..:.:..--......x:...------------------...x.:...::.x...--:.:x..x.x......x.......:..........x......:.:.......--............:.-.:...:.x.:x..-----------.:....x.:------xx.:.:..::.x...........::x.........x....x.x:.xx.:x..x:.:::......--...::..x...:.---------.:...:.......:.--.:x:xx...x....:.x:xxx.::.:xx.x.xx...x.:x..x.......xxx.x:x....:----------------..x.:.xx:x....:.:.x.----:.x....--......::x.:.:.x.x....xx:x:....x..x..::-------x..x.x...::.----:.x...x:...:.......xx....:-...x.x::.--:.....:.-x.::....x.x...-------..::....:x:....:x:..:::..:x:..:--x:.......x............::.....................-..:...x...............................:...x.....xx..:.xx...:::.::.xx..x.x::.-----:..:.x...-...:..-..........:.x.:.x.:.:.....-........-::..x:....:...-.:....x.:.....:---:........:.........x...::..-----:x..::x...-...::.....x.x.x.........--....x......x.:.xx...:...--.....-.:.x...x.:::.x...::.-----.x.x.xxx.:..x::.....x..:::---..::.x..:x......---------------------.....:...:.::.:......:..--.:..x:.x..:.:..x:.x.x.----..x..:.xxx.x.x:...x:.:x.:x.:.:..........xx:.---.:..:....x:......x.:.:---:..x...:...:..x..x:.x:..:..----....---:....:x:.......x.-------...----------------...:..x..x..x...x:.xx..x.x....:::..x.:..::x:..x.:.x.x::x.:...-----x.......:x:..x..x.x..x::....----------x....x...x....:--------.:x...:.x.-----.x..:..::x...xxxx...x:..------..:xx:x...x...x....--------.:x:.x.....x:x..::x:x:...:.x.xx...x:.::----x...:xx.:..:.--...x.x...x:.x::..-...---------------..:x..:.:.:x:::.:..:x.::x.x.:::x.....xx.....-------..:xx..xx.:..:.:--:x..:.x....x..-------.....-:.x....x:..x.x...------....xx..----..:.....:x.:--..x..x.x:.x..x.:.x.....-----------------------...x..:-.....--.x:..x:..::.xxx..x..x.x.x..:x.:x.x---:.x.....--.x.x.x.:..x.:.-----------..:xx.x...x..::..:-----------x......x:...-------.x.:..:..x.:.---...x..-----------------...----:.x::..:.......:xxxx.-......:....:.x:.:xx..xx....::.:x.:...:..---------------.x..x...x.xx.x....-----.....:.x...::.---.......------x.x...:...::.:-----.....x:.:-------....x.....:x..:---x.:....x..x::x..x.:.......x:.x::x.x....x:......---..:----------............:.---------..:..:...---...x:.x..::.x...:.:.....xxx...:x:.x:...::.::--------.x:..:...x....x:........x....x..x.x..xxxx::..xxx:..:...:.:..:...x.:.:..:..x...................::...:.x.x...x:..-.x.x:.:.....xx:..::.--.....x....-----.x:.:.....-----.....:............................---..............--...........................x.....--...............:.:.......:::x.:......:.......--:.:xx::.........................:.:-............--..............x------..........-------..x.x....---...........x.x.-..::...xx...x..::..-...:..:..---:.....:..x.:... 88M2D19M1D10M1I65M1I21M1I59M2D26M1I17M2D11M18I16M2D51M2D14M1D13M11D9M6D64M2D13M9I15M2I62M16D20M4D7M2D38M7I12M4I26M1D9M2D8M1I14M7D31M2I45M1D76M5D9M1D6M1D26M1I8M1I14M1D15M3D27M5I10M1I24M2I24M2D5M1D20M5I26M3D16M21I24M2I22M4I44M3I22M3I27M4D4M3I17M7D3M16D61M5D28M10D15M8D10M5I24M6D19M8I39M4I13M2I17M1I3M15I44M7D16M2I14M7I5M1D17M6I8M4I12M2D23M23I7M1I5M2I34M3I8M2I14M11I18M11I12M7I13M3I6M17I3M4I21M1I40M15D18M5D14M3D7M6D14M5I9M7I15M3I47M3D3M10D14M9D9M3I44M8D111M1I20M2D10M5I10M5I34M3I14M2D33M2I45M2D35M1D12M2D15M6D10M7D9M3I15M1I19M1I9M3D15M 1677/2411 69.6% 2687/94230402 0.0% 507/2411 21.0% 22537237 NA +3556 chr4 + 190214555 48437370 48437369 48437481 112 CTGATCCCTTTATTTTCTGTCTATGTGTGTCTTTATAGGCAAAGT-GTATCTTGTAGCAACAGATTGTTAGGGTCTTA-TTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTAAAT chr4 - 94230402 21022121 21022120 21022229 73208174 73208173 73208282 109 CTTAGCCCTTTCTTCCATATATCTTCAACTCTTCTTGAATAAAGTCTTTTCTCATAGCTCCAG-----TAAGCTCATAGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTAAAT ..x.x......x..::x.:.x.x.x::xx....:x.::::.....-x.x...::....xx...-----..:.x..x..-................................... 45M1I17M5D10M1I35M 78/107 72.9% 109/94230402 0.0% 7/107 6.5% 27415249 NA +4273 chr4 + 190214555 48455726 48455725 48455882 157 AGGGAAAAACAAACAAAAGAGAAAAAAGAGAGAAAGAAAAAAAGAGAA-GAAAAGAAAGG----GAAGAGAGAAAGAGAAAGAAAGAAGAAAGAAGAAATAGAAAAGGAAGAAAGAGAAAGAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAAAGAAAGGAAA chr4 - 94230402 44053978 44053977 44054137 50176266 50176265 50176425 160 AGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAA--GAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA .....x.x:::..x..x:...:.:.....:.::...:.:.x....:..-.:::..:x:..----.....:.......::.x:...:x::.x.x..::..:.....--...x..x.x:....x:.:x:..x....:.......:.:.:x.:x:...x..:... 48M1I11M4I41M2D55M 98/155 63.2% 160/94230402 0.0% 7/155 4.5% 4401748 NA +3618 chr4 + 190214555 48455761 48455760 48455867 107 GAAAAAAAGAGAAGAAAAGAAAGGGAAGAGAGAAAGAGAAAGAAAGAAGAAAGAAGAAATAGAAAAGGAAGAAAGAGAAAGAAGAAAGAAAAAGAAAGAAAGAAAAA chr4 - 94230402 59433013 59433012 59433119 34797284 34797283 34797390 107 GAGAAAAACAAGAGGGAACAGAGTCAGCAGTGCTTGTGTATGGAATGGGAATGCAGACTGGGAAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGA ..:.....x.::..::..x.:..xx.:x..x.xxx.x.x.x.:..x::...x.x...xxx:...:..................:..x......:..:....:.x.:. 107M 70/107 65.4% 107/94230402 0.0% 0/107 0.0% -10977252 -83253150 +3405 chr4 + 190214555 48455795 48455794 48455866 72 AGAGAAAGAAAGAAGAAAGAAGAAATAGAAAAGGAAGAAAGAGAAAGAAGAAAGAAAAAGAAAGAAAGAAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .:...x...x........x..x.:.x..x::::.x....:.:....:...........::x......::... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 23388810 NA +3381 chr4 + 190214555 48455844 48455843 48455887 44 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAAGAAAGGAAAAGAAA chr4 - 94230402 25781763 25781762 25781806 68448597 68448596 68448640 44 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAA ..............................x.::...::..... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 22674081 NA +16915 chr4 + 190214555 48483738 48483737 48484160 423 CCCCGGCCCCACTCCGACCCCGGAGCCCACGACCAGCGGCCTCGCGGGCGGCGCGGCGAGCCACGGCCCTTCCCCGTTCCCTCGGCCCTGGGCGCCCCACGCGCTCCCGTTCTGGGACACGCCGCTGAACCACGGGCTGAACGTGTTCGTGGGCGCCGCCCTGTGCATCACCATGCTGGGCCTGGGCTGCACGGTGGACGTGAACCACTTCGGGGCGCACGTCCGTCGGCCCGTGGGCGCGCTGCTGGCAGCGCTCTGCCAGTTCGGCCTCCTGCCGCTGCTGGCCTTCCTGCTGGCCCTCGCCTTCAAGCTGGACGAGGTGGCCGCCGTGGCGGTGCTCCTGTGTGGCTGCTGTCCCGGCGGCAATCTCTCCAATCTTATGTCCCTGCTGGTTGACGGCGACATGAACCTCAGGTACGGATC chr4 - 94230402 25899944 25899943 25900353 68330050 68330049 68330459 410 ccgcggccccgcggcgcgcccatggccggctcggagcagcccc-----cggcg--gcgggcggcggccc--cgacggcggagaggcgccgggggccgccgAGGCTCTGG----GGGAGCGGCCgctgagccaggggctgagcgtgctggtggggctggcgctgtgcgtgaccatgctggggctgggctgcgccgtggagctggggcagctggggcggcagctgcggcgccccgtgggggtgctgctggcgctgctggggcAGTTCGTGGCCATGCCGCTGGTCGCTTTCCTCCTCGCCCTCATCTTCGCGCTGGACGAGGTGGCGGCCGTGGCGGTGCTGCTGTGCGGCTGCTGCCCCGGGGGGAACCTCTCCAACCTCATGTCGGTGCTCGTCGACGGCGACATGACCCTCAGGTAGGCACC ..x.......:.xx..xx...:x:...x:.xxxx...:...:.-----.....--...:..x:......--.xx..x:xxxxx...x.:...x...x.xx:x....:x.----....xxx........:...x.......:....:.x.....xx:x..x......:.x...........x.........:.x.....xx..::x..x:.x...xx...xx.x..x..x........x.:.........:x:...xx.x.......xxx:.x........x.x..:.....x..x......::....:x...............x..............x.....:........:.....x..x..:........:..:.....xx....x..:.............x.........x.x.:. 43M5D5M2D14M2D38M4D310M 299/410 72.9% 410/94230402 0.0% 13/410 3.2% 22583794 NA +11164 chr4 + 190214555 48484917 48484916 48485148 232 TTCCCTTTTCTGCAGCATCATCATGACCATCTCCTCCACGCTTCTGGCCCTCGTCTTGATGCCCCTGTGCCTGTGGATCTACAGCTGGGCTTGGATCAACACCCCTATCGTGCAGTTACTACCCCTAGGGACCGTGACCCTGACTCTCTGCAGCACTCTCATACCTATCGGGTTGGGCGTCTTCATTCGCTACAAATACAGCCGGGTGGCTGACTACATTGTGAAGGTAAGG chr4 - 94230402 25900483 25900482 25900714 68329689 68329688 68329920 232 TTCGCTCCCCCGCAGCATCATCATGACCGCCTCCTCCACGCTGCTGGCGCTGCTCCTGATGCCGCTGTGCCTGTGGCTGTACAGCCGGCCCTGGATCCACACGGCGCTGGTGCGGCTGCTGCCCCTGGGTGCCGTCAGCCTGACGCTGGGCAGCACGCTGCTCCCCATTGGCCTGGGGGTGCTCATCCGCTACCGGTACCCCCGCGCCGCCGACCTCCTGGTCAAGGTAAGG ...x..:::.:.................::............x.....x..xx..:.......x............x.x......:..x.:......x....xx.xx.x....:.:.:..:.....:..x:....x.x......x..xx.......x..xx.x..:..:..x:....x..x:....:......x::...xx...x.:x..:...:x.x.x..x......... 232M 170/232 73.3% 232/94230402 0.0% 0/232 0.0% 22584434 NA +7614 chr4 + 190214555 48488416 48488415 48488581 166 TCTATTACTAGGTTTCCCTGTGGTCTCTGCTAGTGACTCTGGTGGTCCTTTTCATAATGACCGGCACTATGTTAGGACCTGAACTGCTGGCAAGTATCCCTGCAGCTGTTTATGTGATAGCAATTTTTATGCCTTTGGCAGGCTACGCTTCAGGTTATGGTTTAGC chr4 - 94230402 25900833 25900832 25900998 68329405 68329404 68329570 166 TCTGTGGCCAGGTCTCGCTGTGGTCCCTCTTAGTGACCCTGGTGGTCCTCTTCATCCTGACCGGCACCATGCTGGGGCCCGACCTGCTGGCGCACATCCCCGCCTCAGTCTACGCCATCGCCGTGCTGATAAGGCTGACGGGGTACGCCCTGGGGTACGGTTTGGC ...:.x:.:....:..x........:..x:.......:...........:.....xx..........:...:.:..:..:..x........:x::.....:..xx.x..:..:.:x..x..x:.x:.x..:xxx:..:.:..x.....::::..x..:.....:.. 166M 114/166 68.7% 166/94230402 0.0% 0/166 0.0% 22587583 NA +15152 chr4 + 190214555 48488524 48488523 48488902 379 TTTATGTGATAGCAATTTTTATGCCTTTGGCAGGCTACGCTTCAGGTTATGGTTTAGCTACTCTCTTCCATCTTCCACCCAACTGCAAGAGGACTGTATGTCTGGAAACAGGTAGTCAGAATGTGCAGCTCTGTACAGCCATTCTAAAACTGGCCTTTCCACCGCAATTCATAGGAAGCATGTACATGTTTCCTTTGCTGTATGCACTTTTCCAGTCTGCAGAAGCGGGGATTTTTGTTTTAATCTATAAAATGTATGGAAGTGAAATGTTGCACAAGCGAGATCCTCTAGATGAAGATGAAGATACAGATATTTCTTATAAAAAACTAAAAGAAGAGGAAATGGCAGACACTTCCTATGGCACAGTGAAAGCAGAAAA chr4 - 94230402 25898056 25898055 25898431 68331972 68331971 68332347 376 TCTACGCCATCGCCGTGCTGATGCCGCTGACGGGGTACGCCCTGGGGTACGGTTTGGCCACGCTCTTCAGAATGCCCCCGCACTGCCGAAGAACGGTGTCGCTGGAGACAGGCTGCCAGAACGTTCAGCTCTGCACCGCCATCCTCAAGCTCACCTTCCCCCCACAGCTGGTGGGCGGCATGTACATGTTCCCCCTGCTCTACGCGCTCTTCCAGGCGGCGGAAGCGGGGCTCTTTGTGCTGGCCTACAAGGTGTACGGCAGAGACG---GCCCCAAGCAGGAGATGCTGGGCGAGGAGGAGGACACGGACATCTCCTACAGGAAGCTGAAGGAGGAGGAGGTGCCCGATACCTCCTACGGCACGGTGACCGCTGAGGA .:..:.:x..x..x:.x:.x.....x:..:.:..x.....::::..x..:.....:..:..x......x:xx.x..x..xx.....x::..:..x..:.xx.....:.....:x.:.....:..x........:..x.....:..x..:..x:....:..x..:..::.x:.:..x:.............:..::....x..:..:..:......x.x..:.........x.:.....x:.:::...:..::....:..x..x..x:---xx.x.....::..xx:x..:.::..:..x..:..:..:..:..:..:..:.::..:..:..:..:.....::..x.x..:..:.....:.....:....xx..x..::. 267M3D109M 248/376 66.0% 376/94230402 0.0% 3/376 0.8% 22590468 NA +9330 chr4 + 190214555 48490812 48490811 48491270 459 GCTTCCCGCGCACCGTCGCCGTGTACTCGCCCCTGGCCTTGCGCCGTCTCACCGCCTTCCTGGAGGGGCCCGGGCCCGCGGCGGGCGAG---CAGAGGTCCGGGGCGTCGGACGGAGAGAGGGGGCCGCCGCCCGCGCGGCTTCAAGGCCCAGAGGAGGGGGAGGTGTGGACGAAGAAGGCGCCCCGGCGGCCGCAGTCCGACGACGA-CG--GCGAGGCCCAGGC---CGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCCGAGCTGCCGCCGCGAGAGGCCCAGGAGGGCGAGGCGGCTCCGCGGTCGGCGCTAAGGAGCCCGGGGCAACCTCCGTCGGCGGGGAGGGCCCGAGACGGCGGCGACGGACGGGAGG---CGGCCGTCGCGGGAGAGGGGCCGTCGCCACGGAGCCCGGAGCTGGGCAAGGAGCGGCTGCGCTTCCAGGTAA-------AGCCTAGGGCGG chr4 - 94230402 25902424 25902423 25902799 68327604 68327603 68327979 376 GCTTCCCGCGCACCGTCGCCGTGTACTCGCCCGTGGCGTCCCTTCGGCTCACCGCCTTCCCCGAGGAGCCCGAGCCGCCGCCGCGGGAGCTCCAGGAGCCGCGGGAGCCCGA---------GGAGCCGCCG--------------------------------------------------GCCCCGGCGGCCG----TCGAGGAGGAGCGGCGCGAGGCGGAGGCGGAGGCGGTGCGCGCCAGCTGGGAGAAACCGCCCGA-------GAGC-----------GAGGCC---GGGCGCGAGGCCGCTCCTCTG--------GAGCAGCGCGGGGCCG----CGGCGCCGGAAGGGACCCGGGAGGAGGCAGAGCCGCGGGAGGAGCCGCCCGCCGCGCCCCAGAAGCAG------CAGGAGGCGGCCCCGGGCAAGGCCCGTCTGCGCTTCCAGGTGAGGAgcggggcctggggcgg ................................x....x.:x.x:..x.............:x....:.....:...xx..x..x.x...---...::.:.xx...x.:.x..---------..:.......--------------------------------------------------.............----:...x..x..-..--.......xx....---x..:..x..x..x.........x.:...x....-------....-----------......---.:.x.......x.....x.x.--------:..x...x......x:----..x..x...:::..:....:..x.:x.xx..xxx:.......---..x...:....xxxx..::..x.------.:.::xx...xx.:........xx..x..............:.-------:....:...... 89M3I20M9D10M50D13M4D10M1I2M2I13M3I33M7D4M11D6M3D21M8D16M4D42M3I23M6D43M7I12M 270/357 75.6% 376/94230402 0.0% 121/357 33.9% 22588388 NA +11374 chr4 + 190214555 48492756 48492755 48493016 261 TGTTGTTCAGTTCTTAGAGCAGAAATATGGCTATTACCACTGCAAGGACTGCAACATCCGCTGGGAGAGTGCTTATGTGTGGTGTGTACAGGGAACTAACAAGGTAAGAAATACCAGGTAACTGGCATCTTCTTGCTGAAAGTGTCAAGGCGATTTTAAGTTTATCCTCTTTGT-CATCACAGGTTTACTTCAAACAGTTTTGCAGAACTTGTCAGAAGTCTTATAACCCTTACCGAGTGGAGGATATCACCTGTCAAGTAA chr4 - 94230402 25902834 25902833 25903087 68327316 68327315 68327569 254 TGTCCCTCAGTTCTTGGAGCAGAAGTACGGCTACTACCACTGCAAGGACTGCAACATCCGCTGGGAGAGCGCCTACGTGTGGTGCGTGCAGGGCACCAACAAGGTAcgtcccgtcccgtcccgcccggctcctcgcc----gcccccccgcgccc----gctgacctcccccgcgccccgcAGGTGTATTTCCGTCAGTTCTGCCGCACCTGCCAGAAGTCCTACAACCCGTACCGCGTGGAGGACATCACCTGCCAGGTAA ...:x:.........:........:..:.....:...................................:..:..:........:..:.....x..:.........x.xxx:::.xx..xx.xxx.:x..:..:..:----.:x:.xxx...x::----.:.x.:.::.:::.:-.x:.:.....x..:...x:x.....:...x.x..:..:........:..:.....x.....x........:........:..:.... 137M4D14M4D15M1I87M 182/253 71.9% 254/94230402 0.0% 9/253 3.6% 22589922 NA +9745 chr4 + 190214555 48494077 48494076 48494245 169 CCCTTCTGTATTTTTTTCCCCCAGAGTTGTAAACAAACGAGATGTTCCTGCCCAGTAAAACTTCGCCACGTGGACCCTAAACGGCCCCACCGTCAAGATTTGTGCGGTAGATGCAAAGGCAAACGCCTGTCCTGTGACAGCACTTTCAGCTTCAAATACATCATTTAGG chr4 - 94230402 25903131 25903130 25903299 68327104 68327103 68327272 169 CCCCGCTGACGCCTCTCCCCGCAGAGCTGCAAGCAGACGCGCTGCACCTGCCCCGTGAAGCTGCGCCACGTGGACCCCAAGAGGCCGCACCGCCAGGACCTGTGCGGGAGGTGCAAGGGGAAGCGCCTCTCCTGCGACAGCACCTTCAGCTTCAAATACATCATCTGAG ...:x...xxx::.:.:...x.....:..:..:..:...x.x..:x.......x..:..:..x..............:..:x....x.....:..:..::.......x..:.....:..x..:.....x.....:........:....................:.::. 169M 128/169 75.7% 169/94230402 0.0% 0/169 0.0% 22590946 NA +92635 chr4 + 190214555 48497541 48497540 48500233 2693 TTCTTTGTTAAAATACAACACAAACCAACAGCTACAATGCTTTTTATTTTTAACAAAAAGGATGTAAGGAGGGTAAGAAAAACAGAGGACAGTAAGATAGGATGTAAA-----GTGTGATGTATCTCTGGACACCATCCCTCTCTGCCTGCCCCACACCCAAAAG---TTTTAAATAATTTAAAGGATACCAATTACAGTACCAGAACACCATCAAAATAATT--GTCTTTATCAGGGTCA------AAAAATACAGTGATT-ATGAATGAGCTGTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGGTGTGCACAGTGCCTTCAATTAATGCACTTGAGCATACGTAATTACATTTCTGGCAGGGTCCACACCCCCCAAGAAAAGGTAAAGCTAAGCATTTCATTTCTACATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAG---TCACAGTGGATAAGAGATGTATATAAAAAATACAAGGTGTTTCTTTCAAATCA--GGAGTTGTGGGACTACATTCTTTTTTTTTTTTT----------------------------------TTCTTTCTTTTCTTACAAAATGC----GATTTTAGAAAAGGATAGAGACTCCAGTTCATGTTATACTACAGACTTAGACAGTGAAT---AAGTATATTGCATGTT--------TTGGTAGTCAGTCTTCAGGCTTCCTTTCATTTCCCCTAGCCCCAGGTTTCTTTAGGGTAAAGCATGTGAGTCCTGAATAAAGATACAAAAATGCATTTGCAGCTCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCACAATTTTTCTTT-----AGCTTTGTACACCTATTCTTGTATAACAACAGTGCATGGCACAAATGTACAAGAAAATAACTGGTTTTAGTCTCTACAGTTTCTA-------TATGGAGTAAAATAAGTTAAAACTTTTCTAATGAGAATAGCTGACAGGCAGCATACATCTTTATTTTACATTTTAAAGTCTCTGCAGGCATCTACTTT--GGTTAGTT---ATCAACAATCATAACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATATTATTTCTTTTTGAAATACTGGGAAAGCCCAGTTTTAAAATATTATTAAAATGTTCTAACATTTACATACTATGAAGAGTTAGATCTAATAAAATAACATTTCTTCAAAAATAATCTTGCAGTGCTCTTTTAGGCATGCTCTGAGACGTTATC-ACCAAACATCCATACCTTGAAAATATGACTATCACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAACAAAAAAACCCAAACCCTTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACG--AGTCTTGATGCGTATAGCTGACTGCATG---TTCATGTGGATGGA-------TGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATT-GGAGGCCATTATTGCAAACATTCTTGGAATTCTTTTCTTTCCCCAGAAAGTAATGTATTTGTAGGCATCACTTTTA-GCCCTTTTCTTTTCACGTAGGTT----------AAGTAATTAAAAAATTCCTTCT-TCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTTTTTC---TTTCAGATCTTTGT--TTTTGATGATACAGTTT-------------------GACATTAGTTA----CACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCC------ATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTTCCTAAAGGCCTGAAGTGTCTCAGAATCCAGTGCTCACCATATTTCCCATTGGTTTGGCCTGTGCTAGAAGTTGGTATGATTGCACCATGCGTAGAGACTCTCTTATTTCCAGATTAAGTTCCATCAGTTTGTAGTTGGCTTCTGACATGTCCAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTGCCAAAGATATCACTGGGCCAGAGAGATCTGAAAATACACAATAGTTTTTCAGTTCTGAGACTT--------------AGGCAATAGTTAAG----ACTAA---------CTCAATTTAAGTTAAATACCTGTAACAACAACATTTCCTT----------------GTGAATAACATGATCTGTTTTA-----ATATTT----GAGCAAATATTACTCAAAGTACCACCTGAATTCACTTTCAAAGTACCATCTGAAAGTGAAAAGAAATCTAA-AATTG-----GTATCATTTCAGTGGCAACTGTTAAAAATACTCA----TGTTTTTCTTTCACAAAGACATGATATGGAAACAGC-----AAATTGA-------------------------AAATGAAAACCTAGTATTACTAAACTTCCTGTCTAATTTAAAGGCATCACCTTTAAATCCCGTCACGTTTTACCTGAAAGCTTTGACTTGTGCTACAGCTGATATAAATTCTTTATTTTTCAAAGTTTCAATTAAAGAATGAATGGCAGTTTCTATAGTAGTTTGTGCAGCTTTGGAAATGTCAATTTCTTCG------TTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTTCCAGTTGGGCAAGTTCCTCTGACATGTTGATGACCTAAAACAAATAC chr4 - 94230402 25905955 25905954 25908730 68321673 68321672 68324448 2776 TTCTGGCTTGTAAAACTACACGAGATGACAGATACAATGTCTTTTATTTTTA---------------------CAAAAAAAAAAAAAGCTGGTAAAAGATGATGTAAATAAAAGTGTAATGCGCCACTAAATAGAA-------CTACTTATCCCCCCCTGTAAATACTTATTAAATAATT--AAGAACACCATCTACAGTACCACAAAACCACCAAAATAATTCAATTTTTATCAGGGTCAGGAAAAAAAAATACAGTGATTTATGGATGTGCCTCGACTGGTTAC-AGAGCTTGTTAGGATAACGTAACTACTGTCAGCAGCCCAACAGTGTGCACAGTGCCTTCAGTTAATGCGCTTCAGTACAGTTAATTACATTTCTAGTGGGGTCGAATTCCCCCAG--AAAGGCAGAGCTAAGAATTTCAGTTCTACATTCTAAACTCTGGAATTA--GAGCCCATTTAAAAAAAAAAAAAATCACAGTGGGTAAGAGATGTATATAAAAA-TACAGGGTGTTCCTTTCAAATCACAGGAATGGTGGGACTACAttctttttttttttttcttctttttcttttttctttttttctttttattattttttctttttttACAAAATGCTGTTGGTTTCA---------ACAGAATCCAGTTTGTTTTATGCTACAGACTTTGACACTGAACTAGAAGAATATTGCCTGTTCGCATGGTTTGGGAGGCAGTC----------CTTTTGTCTATA-TAGTCCCAA--TTCCTTAGGCTTAA---CTTGAGCCATGTATG------------TGCATTCAGA---CTTTGTTTGAACCCTGCAGGCGACTCAGACTGCAAGTCACATATGTGACTACCAATAGTGAGAACTCCCCTTCCCCTCAGCTTTATACACAC---CTAATGTCTTAACAGTGCATTGCACAAATTTACAAGAAAAATACTGGTTTTGCACTATACAGTTTCTAGAATATATACAGAATAAAATAAGTTAA----CTTCTAATGAGAATTGCTGATGGGCAGCATATATCTTTAATATACATTTTAAAGTCTCTGCAGGCAGCTACTTTTTGGTTAGTTGTTATCAATATTTGTAACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAAAGTTAACAGATATATTATTTCTTTTAGAAACACTGGGAAATCCCAGTTT-AAAATATTATTAAA-TGTCCTAACATTTACACGCTATGAGGA-TTAGATCTAATAAAATAAAATTTCTTCAAAAATAATCTTGCAG--CTCTTATAAGCATGCTCTGAGACCTCATTTAACAATCATCCATACCTCCAAAAAACAACTGTCACATAGCCACACATACCAACTCACACACATCGTTTCCTCGTTACGGACAACAAAACAAAA----------------------CACCGAGAAGTCAATGGTTTTTGCAGTCAGAAGCCATCCTACTCATAGTCGACCGCACGCTCTTCATGATGCTGCAAAGTGTCTCATTAGGTATCAGCTGATGATTATATCTACTGCTGCTGGAAAGCCAGGGAGCCTTGCAGGTCTTCAGCCAAAATAAACCAGCCTTGATTTTAGCCTCATCCCACCTGCAGT--ACTGATTCAACGTTTAGAGGCTGTTACTGCAAACA--CCACGTATAGTTCTGTTACGACAGAAAATAATGCATATGTATGCATTACATTTAAGCCCTTTTCCTTTCATGTAGGTTTTATACATACATTTAATTAAAAAAATACTACTGCCACACAGCTACTGTGTAGAAAA-----AGCAGTTAAG---TAAGATGTTAACTTCAATTTTCAGATTTTTTTACTTCTGAAGAAATAAGTTCTCGCTGTGATGAAACCGGGTCATTTGTCAGGATTGCTGGACAGT---TTCTTTTTCATGGTTTTTGTTGTTTGTTTGTTTGTTTTTAAATGAAAGGTGCTCAAT-AATAGTCCGAAGCATCTTCAGAATCAGTTCTCTTCTAAATGACAGCTGT---TCAGAATCCAGTGCTCACAAGACTGACTCCTGGTTTGATTTTCCCTAGAAGGTGATAGGATTGCACCATGCGTAGAGACTCTCGAATTTCTAGATTAAGTTCCATCAGCTTCGAGCTGGCCTCAGACATATCCTGGTTGGAGCCCACTACTGCAAAGCTCCCGGTCTGACCAAGTGTCTGGTGACGGAAATATATGTGCAGCAGTGTTTGGATCGGGTCGTCTTCCGAACTGCCAAAGATGTCGTGGGGCCAAATGGATCTGTGGACACACAA-----TTTGCATTTAGACATTTTAAATAAAGAAAGAAAGAAATATTGAAGCATTCCTAAAACAGGGATCTGAACGGAAGGTATGGAAATGCAAGAGGAGTCTTTTTTTCTGTAGAGTCCTTATAGTTCACAGTATGATTTTTCACAAAGCCAAATTCTAAAGAACAAGTATTACTACAGTTGC----------CTTTTTTAAAA----ATCAAAAAATGCCGATGAACataataattaataatataatatattaataattaatGCAATAGTTAATCAACTGTGCTTGTCTTTTTCAGTAAGAGTATCTAGCAATAGCTGAAAAAATTGGAATAGTGCCTACCATCCCTGTCTTTAAATTAGAACGGCCCATTAGCAAA------GTCTGGCCCGAAAGCATAATCCTTATGCAC---------TCACCTGAAAGCCTTGACCTGTGCTACGGCTGACACAAACTCCTTGCTTCTCAGGGCTTCAATGAGAGAGTGAATCGCTGTTTCTGTGCTAGCTTGGGAAGCTTCTGCAATTTCAATTTCCTCGATACCACTGTCAGATGCAGCCTCAGCCTCTTTCAGACAGCTCTCCAGAAGAGCAAGTTCCTCAGACATGTTTATGACCTAAAAGAAATAC ....xxx..:x..x..x....:.:x::....x.......::...........---------------------:..:.....x.:.:.x::....:.x.x........-----....:...:::.x..::.:.xx.-------..:.:.::...x.x.:xx...x---.x..........--...:.:....x:..........x..x....:..........--:.:.............------...............-...:...x..:x:...::.....-.:.x:..::.:.:.xx::x.....::x........:....::..................:.......:...x..:.:.xx.............:.::.....x.xx:......:--.....:.:.......x......x.......................:.--.......x..x....:....:---.........:...................-....:......:...........--...:.x...........................----------------------------------..:........:...........----.:...:.---------.x...x.......::.x....:..........x....x....:---...x.......x....--------....x..x.....----------....::.:.x:x-...:....:--...:.....x.x..---:x....:.x..x..:------------......::x.---....x:.....::......:.xx.xx..x..........:....x:x.::.:....:::x.x..:.:::...:-----......:.....x:---..x:.:.xx:..........x........x..........xx.........:xx..x...........-------..::..:.............----:.............x.....::.........:.......x.x........................x.......--........---.....:.x.::..........................................x........................x....:.........x........-..............-...:............::......:..-..................x........................--.....x..:..............x.:..:-.x...x...........:x....x.::...:.......x...:....x..............:xxxx.:.::xx...:...x.x.........----------------------:..:..:..:...............:x.:--..:.x.xx.:.x:....::...:...:.---......xx.x..x.-------.x....:.:....::..xx.:...x:.:.x.x:.....:....x...:.x...:...............:.....:..x............:........::.......xx.--::..x....:::..-:.....::...:........--.:xx.x..xx..:.x..x.xx......:.....:..x....x....:..x....-.........:.....:.......----------.xx...........x.x..x..-:...:...:..:....x:::.x.-----...x.....:---.x.......xx:...---........:...x.--..:...x..x.:.:x..-------------------.x....x..:.----::..::.x...---.x..x::xx.x:...x.::x..xx..:xx.xx.x:------..:.........:::.-....x..:xx.x.........xx.x:x....:.:.....x.x.x.xx..---..................x.x.:.xx.:x:.......:::.x:x.......x..:..x.........................xx.....:.................:..xx..:....:..x.....:...x....:.....:.:x...........:..x.....:..x..:.....:...:..........:..:.:......:..x.:x.....:.....xx.............:..::x......:.x:......x::.:......-----...xx:..:x..x.:..--------------.:.x....x.x...----x....---------..x..:xx...x..x:x.xx..:..x.:x.::x...::..----------------..xx.:.::.....:.x.:x:.-----.x...:----..:...:.......xx.:x.:.----------.x:...:...:----...x:...:..xx:.x:..:x...-....:-----:..x:..x.:.:.:::x.x..:x.x.:x..x...----..:..x.....:x..:x:.x.xx..x.:.x..:...-----......:-------------------------....x.:...xxxx:....x:...------....::::::..:....x.:.:...x::x.---------.:..........:.....:........:.....:.:...:..:..::..:...::.:......x.:...:.....x..x......:.:x...:...x.x.....:x.x...x........:...------:.x..:..x..:.x......:.....x..:xx:..:.....xx.:...........x........x...........x...... 52M21D35M5I23M7D22M3I12M2D41M2I16M6I15M1I23M1D115M2D48M2D21M3I29M1D23M2I33M34I23M4I7M9D43M3I16M8I13M10D12M1D9M2D14M3D15M12D10M3D73M5I14M3D68M7I20M4D74M2I8M3I102M1D14M1D27M1D43M2D29M1I93M22D29M2I28M3I14M7I112M2D14M1I20M2D54M1I23M10I22M1I23M5D10M3D15M3I14M2I17M19I11M4I11M3D35M6I16M1D49M3D273M5D17M14I14M4I5M9I40M16I22M5I6M4I22M10D11M4D24M1I5M5I34M4I36M5I7M25I24M6D30M9D124M6I84M 1901/2530 75.1% 2776/94230402 0.0% 409/2530 16.2% 22591586 NA +3016 chr4 + 190214555 48499934 48499933 48500015 82 ATGATATGGAAACAGCAAATTGAAAATGAAAACCTAGTATTACTAAACTTCCTGTCTAATTTAAAGGCATCACCTTTAAATC chr4 - 94230402 16230432 16230431 16230513 77999890 77999889 77999971 82 ATGCTAAGTAAACAACAAAGTAAAAATTACAGCCTAATATTTTGAGAATACATAGTTAATTTAATGTAATTACATCTAAATC ...x..x.x.....:....x.:.....x.x.:....:....x:x.:.x.x.x.:x:........x.xx..:..x.:...... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 32269502 NA +18782 chr4 + 190214555 48501619 48501618 48502957 1339 TTACCTCTGCTTCATTTTTTATCGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGAAAATGCAATTTGTATAATCTTCGGCAGAGCTCCAATTCCTAGAAAT--AAATAACATTACATTAAATTTA----------GGTGTTATTTTCTAGACAGCATATTTCCAATGGAAATTT--------------------ATAGTTAAAATTGTCTTGTCGTTTATTTTTCTGCAGTAAGGA------AGTTAATATGGTATGAAGCTGATGAAAGGCACGTGAAATATGCTTTAAAGACTAAGATTA-AAATAAAAACAAATATCACTGCTGGTTACATAATTCA-GTTTTAATGTTAAGC-ACATTTTCACATTCTACAAATAGACTGTTTCAGCAGGCAATTAATAGGATACTTTAAAAAGGATTCATTAGAATTTAAAACTTTAAATTCATAATTAAAATAATCTACAAATGCAAAGACT-TTTGCCCTCATTGAGATGTAGATCTCACTGCATTTATCAACAAATGCTTGATAAAGCAAAGTGAAACCGGATAACCTCTTACCTAAAAAGTAAGAAAA--GCTGTCTTTTAAAGTGAGGTCATTTTTCTAAAGAAAACCACTTGGTAATCTCATTGAAATGAAACTATGAAATTAACAACGTGGGCCGAGCACGGTGGCTCACACCTGTAATCCTAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGCTCAGGAGTTTGAAACCAGCCTGGCCAATGTGG--TGAAACCCCGTCTCTACT---AAAAATACAAAAAATAATTAGCTGGGCATGGTGGTGGGTGTATGTAATCCCAGCTACTGGGGAAGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATCATGCCACTGCCCTCCAAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAGTTGTGCACTTTGATTTTTTAAATTAAGAAATTTAAGAGGAGATATGTTTAAGAAAAAGGTGACTGCTA----ATTTTATGTATTTTAACATCTCACTATTTTAAAAGAACCAACATTTCATGGATTAGGGCTTTGCAAAACTGAAGCACATACTACTTGTAAAGTAGTCCACGAGAAAACATTGCTGGGTCACAAATGGACAAATGGCAGATGAAAACCAGTTTGT---CTGGCAAGGGTGAGTAGTCTATAAATCAAGACAGGTCACTTACTGCTAGTATTTCCATTTGCTAAGCAAGAAGGTGATCAGGTCACAAAAAATACAAAGGAAG-AAAAAGACCAAGAATTAGTGTAAGAAATCATTTTAACTAGGGTCACAGATGTTCCAGGTAAACTGAAGAA chr4 - 94230402 25910055 25910054 25911220 68319183 68319182 68320348 1166 TTACCTCTGCTTCTTTTTTGATTGTGTTTACTTGGCTGATAAGTTTGCAGTAGGCTTGGAACAGAAGCAGCAACTGGAAATGCAACTTGTATAGCCTTCGACATAACTCCAGTTCCTACAAATGTAAACAACGT--CATTAGATTCACAAAGTGAGAAACGTGCTATCCAATACAAGAAA---CAAATGACAACTTCAGTATAGAATGTGCAAAAAGTAGAAGTAGTTATTTGGTTACTGATGAAAATGCCAAAAAGATTTGCAAGCTAATGCAGCAAGAAGCTAATGAAAAGCAAATGAAAGTTTCATTCAGTTCTATATTTATAGGTAGACTC---TCTCAC-ACAGGTTA-AGAGTTCACATTTTAATAAGAAGTTACATTTCCAAAT-----------------------GGCAGGAGAAAAAGTGATTCAAAATGCATT---------TTAAAATGTCATGTTCCCAGACAGAATA----------TCACGGATTGTTTACTTGTATTG---TTGATGTTTTACTGCTTT----------------------------GAATTCAGG---------AACTAAAACAAAAGAATATCGTTGTGATTGGTAAGTACACCATCTTTC-----ATAACCACT---------------AATATAAATAGTACAT----AACCTGGTCTT-------TAGCTTATAACTG----CCTGATTGAATAAGAGG-----------AAAATAATTCCATTCTTGAATGTAAGAATAATGTTTCCTTTGTGAAAGGTAGCTCTGTTTCTGTTTTAGAACATACCA----------------CATG-----------ATATAATCTTAA--------AGAAATGAAACAGCAGCATT-----AACTTG------------TGCACTG--------TCTTGTTTC-AATTTTTATGCTTCTGAAACTATTCGAGATGC-----------------AGACAGTGCTG----GTACTGCTTTACAGAAAGATAT-----AAGAGCTAATTCTAATGGAAAAAT--CTTCTATAAGGTTCTACTTACTACAGGATTCTGTTATCTACAAAGAACCAACAGTTCACTGGGTTAGATGATGCAGAAATGAAGCACACAGCATTTTTGTAATAGTCTATGACAAGACACCACTATGTCACAAATGGATGA--GACAAATGGAGACCAGCTCGTTGACTGGCATGGTTAAATATTCGATAAATCAAGAACCATCACTTACTGCTAGAATTTCCATTTGCTAAGCAAGAAGATGAGCAGGTCAC-AAAAATACAAAGAAAGAAAAAAGATCAAGAATTAGTGCAGGAAATCATTTTAATAAGGGTAAAAGATGTCCCAGGTAAAATGGAGAA .............x.....x..:..:.........:..........:........:.................:..:........:.......::.....:..x.:.....:......x....--...:...:.--.....:...:.----------:::..xx.x.:.x.x...:x.x.---.x....:x..:..--------------------:...xx:x.:..:.:.x..:::.x..xxxxx...x:x..:..------..:....:::.:.x......:......:...x:.....xx.x.x..x.:xx...x:x...-.::..:.xx.---.x....-:.x.....-.x.:....-:.......:xx...:-......:..x..-----------------------....:xx:.x.:::.:x..:....x.x...---------......:x.:.x:...x:.:x:.:....----------x..x:..:.-...:.::x:....---.xx.x:.:.:.....x..----------------------------...x:.:.:---------.x......x:x.....x.--.:...xx..x:x.:xx.x::...:....-----.x.......---------------...:x..x..xx.x..----...x...x.:x-------.:...:.:.x...----...:::xxxx.::....-----------.:.x:.x..xx::..xx..:.x.:.:.x:.::x.xx..xx....:--x.x.:.:.:..:...::.---:..x....x.----------------....-----------..:.....::.:--------::.:x...::...x..x..:-----...:..------------....x..--------..x..::x.-:x::.::.x..:.xx.x...x:xx.:...:x.-----------------.:.x...xx..----x.:x.x:....x.xx....x..-----.:...x..xx.:...x::...::.--..x...----:..:..:x..:.x:.:x..:::::...:.xx............x....:x.:x.x:.::xx....:..x.........:.x:.:..x.:x.:.....:.:..x..:...:::..:x............::.--.:..:...:.:.....:.:..---......x..x.:.:..x..x...........xxx:..............x.......................:...x........-............:...-.......:............:.:.............:x.....x.x......:.........x..:.... 123M2I9M2D11M10I23M3D13M20I42M6I60M1I10M3D6M1D8M1D8M1I15M1I12M23D30M9D28M10D9M1I13M3D18M28D9M9D18M2I28M5D9M15D16M4D11M7D13M4D17M11D45M2I18M3I10M16D4M11D12M8D20M5D6M12D7M8D9M1D32M17D11M4D22M5D24M2D6M4I131M2D21M3I86M1D16M1I70M 751/1109 67.7% 1166/94230402 0.0% 287/1109 25.9% 22591564 NA +6921 chr4 + 190214555 48510046 48510045 48510174 129 AAAAGAGACTGACCTGCTCAGCGGCTTCTCTTTTCACATTGTATGTATCCAGGTGTTCTTGCAACTCCAAAACACCAAACTTGAGTGTTTCCAGCAAACCACATGACATCAGCTGTCAAATCAGAAGTA chr4 - 94230402 25917625 25917624 25917753 68312650 68312649 68312778 129 AAAACACACTCACCTGTTCTGCAGCCTCTCTTTTGACATTATAAGTATCCAAATGTTCTTGGAGTTCTAGAACACTGAACTTCAATGTTTCCAGCAGGCCACAAGACATTAGCTGAAAAGATAAAAACA ....x.x...x.....:..x..:..:........x.....:..x.......::........x.::..:.:.....::.....x.:...........::.....x.....:.....xx..:x:.:..::. 129M 96/129 74.4% 129/94230402 0.0% 0/129 0.0% 22592421 NA +12043 chr4 + 190214555 48510831 48510830 48511332 502 TTACTGTTTCAGCATCCACAAAGACTGTTGGGCATTCTGAACACAGCATCATCACTTCCAAGGAACTTTTAAATTTGGTACCAATGCGTTGCAGACTATCACCAAGAAAGCTGACTGCCTCATTAGTTATTTCTCCAAACTTTCTTTGAATTGTCTATGGAGAAAAGCAGAAGAAAGAGTTTAGTGTTTCATAAGAAGGCCTTTTTTCATCTTTAAGTAAAGAAGCATAATAGGGTAGACTTTTATTTTAAAATTATAATGATATATAGAACTTTAATCATTGATCTATAAATC----CATATTTTTAGGTATTTCCTTAGAAAACATTAATTTCTAAAAAGAAACAAAAATTTAC-------AAAATAGTATT--ACTGAAAAAATGATATATGCCATTCATCTCCCTATTCCTGAGATTTTTTCATCAGGGGGCAGACAGATGGATGCATGCTGTACATTCTTAGCAATGAAAGTCCTCACCTGTCT-TG----AGGAAGTTGTTCATCAAAAGTTAT chr4 - 94230402 25920302 25920301 25920782 68309621 68309620 68310101 481 TTACCGTTTCTGCATCCACAAAGACTGTTGGGCATTCTGAACATAACATCATCACTTCCAGTGAACTCTTGAATTTCTTTCCAATGCGCTGTAGACTTTCTCCAAGAAAGCTGACTGAATCATTTGTTATAGCTACAAACTTTCTCTGAATGGTCTAGAAAGCAAATAAGAAAAAAAAAATTA---TTTCAAAATCCCTCCACCCCTGGTGTTTTAGTTTAAAA--ATTTCAAGGAAAATTTCCATTGTGACA----------GCATAGATTTTTTGACACTAAATTACAAAGTAAGACATAATTGTATG---TTCATTTAAAAGTAT---CTCCAAAAAGGTAAGAAATAAGTAAATAAAGGAAAACAGCATGCAACTATGAAGATGATAC-TTCCTTTCATAT--------CTGGGCCTTTACCATCA--GGATATCCAAATGACTGTGCCATACAGATTCCACTCA-------TTTTCAACTGTTTGTGTTGCAGAAAGTTATACACAGAATGTTAT ....:.....x................................:.:..............:x.....:..:.....xx.x........:..:.....x..x................xx.....x.....xx..x..........:.....x.....x::..x...xx....:...:.:x...---.....x..xxxxx..x::::.x:.x...x...xx.:..--..xx:.:..x.:.:..::...x.:.x.----------::.....x:...x:x..:.:.x:..:...x:----....x..x..x.---...x..x:...::..---:.:.x....:.x..x...x.xx..x-------....:..:..x--...:x:..:......:-.x..x.....x.--------...:.x:...x:.....--..::.xx..:...:x..:::xx.::.x....:xxx..-------.::...x....:.-..----..:.....:.x..:x:..x..... 183M3D38M2D27M10D31M4I12M3D15M3D25M7I11M2I16M1D12M8D17M2D37M7D13M1I2M4I24M 322/463 69.5% 481/94230402 0.0% 57/463 12.3% 22590529 NA +14483 chr4 + 190214555 48512473 48512472 48512703 231 TCACTGACCTGAAACAGCCTAGAAAACACATGAAAAGTAAACACTGCAGAGGACCCGTCGGTGTCAGACAGCATCTGATTGACGTGGCAGCGCCAGGCTTCCTCTTCATCATCATATGCCACGGGCTGAAAGGCGGCTATGATGGCAGAAAGAAATGGTGACGGCAGAGGCGACGTCTGTACTTCTGGAAAACCATCTTGCTCTTCTTCATCTTGACTATTAAC-ACAGATA chr4 - 94230402 25922410 25922409 25922641 68307762 68307761 68307993 232 TCACTGACCTGAAATAATCTTGAGAAGACATGAAATGTATAGACAGCACATGAACCATCTGTATCAGATAGCATTTGATTGACATGGCAACGCCAGGCTTCCTCTTCATCATCATACGCCACTGGTTGAAAAGCTGCCAATATGGCAGAAAGAAATGGTGAAGGAGGTGGAGAGGTTTGTACTTCTGGGAAACCATCCTGTTCTTCTTCATCTTGGCTGTGAACAACAGACA ..............:.::..x..:..x........x...x.x..x...x.x..x..:..x..:.....:.....:........:.....:..........................:.....x..:.....:..x..:.xx....................x..x:.x..x..x..:...........:........:..:..............:..:.x...-.....:. 224M1I7M 189/231 81.8% 232/94230402 0.0% 1/231 0.4% 22590063 NA +12692 chr4 + 190214555 48515019 48515018 48515297 279 TATTCTCACCTAGACAGTCCGGAGAAATCCGCTTCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGACTGACTCGGGGTAACTTTCAGGAGCTAGAGGCTCTGGCATTTC---AGTTTCTTCTAAATCAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCCTTCATCTTCAAAGGTTG---TAACATGTTCCTCCTTTAATACTGAAGTTGTATCCTACAAAACAATCATAGTTTTA chr4 - 94230402 25923580 25923579 25923864 68306539 68306538 68306823 285 TAATCTGACCTAGACAAACCAGAGAAGTCAGCTTCTTCTTCTTCACATCTCTCATCCAGTTCTTTCAAAGCCAGAGTGACATCTTCTTCACAGATAGATTCACAATAGCTCTCTGGAGCTGCAGGCTCTGCCAGTTCTGGGGTCTCTTCCAACTCAAGAGGTTCATGACAGACCAGACAGTCTTGCTGTTCTTGTAGTAGATATGACCCAGTGTCTTCACTAGCAGTGCTGACCTGTTCATCCCTTATTGCTGAACAGCCTTCCTGTGAATCAAACATACTTTTA ..x...x.........:x..:.....:..x....................:.....:..:.......:...:.::..:.....:..........:x..:..:x::..:..:..x......:x........x..x...---:..:.....:..x......:x.:.x.....x..x...x.x..:...........x.x..x...x..:..xx::......xx:.:x.---.:..x.....x...:...x.:.....xxxx:x....:::..x...x....x..... 137M3I86M3I56M 204/279 73.1% 285/94230402 0.0% 6/279 2.2% 22591439 NA +4093 chr4 + 190214555 48519809 48519808 48519887 79 CTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGGACTACACGTGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACAC--GTGCACCAC ..:..:..:xx:x..:.:...........x...x.xx.x.........:.:.........:.......--......... 68M2D9M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 30322683 NA +28144 chr4 + 190214555 48520474 48520473 48521272 799 TTACATTTTTAAAAAG--TATAATAATCTTTAAAAAAAACACTAA--TACTTACTTATTTTTGGTCAGTCATTAGCTTCAAATCTGGCTTACTTCTCACAGGCCTTTCCAAAAAA-CATAATACTAGTGGTTCCAAAGTCTTTTTAAAAG----ATTTCATTTAAC-AACTGCTAAAAACCACAGCTGGCCTGAGGTTTTAATCCCAATCACAGCACCAATCACATAAACCCAACACAAAGCAAAAAGAGAAGAAAAAACCAAAGCGGTCCTTCTAAGAAAATACAGTGCAATAGATGATGCTCGCCA-ACCCCAGAGAAGCGTCT-GTACATTAACCTCATCATGTTCTGCAATGCAAACTGCTCATTAAAAACACT-CAAGATTATTTTTAACCTGTAGGTCATTTCCTTAATCTACCA-----ACTTAAGAAAAAATCAGATTTGACTATTTCATTTAAAATAAC---TCAACAGGTTAGAAATACTGGAAACAAATCAACTTCAAAACTTTTTTGAAAGA---------AAAGCGGGAGCTATAAAAGAGTGCTAAAAAGAGCCCAGATTGGCCATGCACCAGCCTCCATTTCTCCCCACCTCAGGCAGCCGGCTGTTAGCATTATCTAGAGAAGCCTCCAAAGTTGGGGTCTCATCCCTGATTTGAAGCACTTCCTCTGTTGTGATGCTGCCAGTGGAATCTTCAGACTGGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTTTAACTAAAAAGAGAAAGAGTAAAATAAGGAATTCATTTATGAGTCAAAAGCCACAGGAAA chr4 - 94230402 25927131 25927130 25927916 68302487 68302486 68303272 786 TTAAATTATTCAAAAGATTTTAAAAAC----AAAAAAAAAACTGAAGTACTCACAGATTTGCAGGCAGCCATTAGCTTGAAATCTGTCTCACTCCACAAAGGCCTTTCCAAAAAAGTACACCACTAGCA--TCTGTGGTCCTTTTTAAAGGATTATTTAATTGAACCAACTGCTAA----CACAGCTGGCCTGAGGTTTTATTCCCA--CATAGCACCAATCACATTAACCCAA-AGAAAGCAAACAAAGGAAATAAA---------GTATTTGAAAGAAAATTTTGCTCAAGA-AGGATTTCAACCGTATCAAGGAAAAGTATCTTAAATATTAGCCTATTTTCATTCGGCACCATGAAATGTTCATTATCAGCCCTTCCAGAATATTTTTAACCTGTGGTAAGATCCCTGAGTGCAACACATGTACTT---------TCCGTTCTGAGGGAACCTTTTACAAGAACATTCCAACAGGTTAGAAATATTAAAAGCAAATCAA----ACAACCAGTGTAACAGATGAAAAAAGAAAGCAAAAGTTGCTACTGAACACTAGAAGGAGCCCAGATCAGCCATGCACCAGCCCACATTTCTCCCCACCTCAGGCAGCTGGTTGCTAGAGTTATCTAGAGACGCCTCCAAACTTGGGGTCTCAGTTCTGATTTGAAGCACCTCTTCCGTTCCCACACTGCTAGTGGAATCCTGTGACTGAAGTGATAAGCCAGCATGATCAGATATTGTTTCATCTATGGCAGAATCACTGTTTAACTGAAAGAGAAAAGAAAAAAGT--GAAATTCCTTAGTGTATCAA-----ACAGGAAA ...x...x..x.....--.x...x..:----........x...:.--....:..xx....x::.x...:.........x.......x..:...:.x..x................-:.:.x:.....::--..::x:...:....x....----....x...x...-.........----.....................x.....--..:..............x.......-.x........x.:..:.:.x...---------..x:..xx........x:x.:x...x.-.x...x::x:..:-.:.xx:..:...::...-:x.:....:...xx.:x::...x...x::::..x..:......xx.:.x..-.x...x..............:.xxx:x.:...x.:.x:.x..-----....---------..x.x.:...xx:xx:.x....x..x...---:................:.::..:........----.x...:xx.x.:.x...---------.....:::..:.::x.xx..:::...:..:..........::..............:x.......................:..:..:...x:...........x.........x...........x::..............:..:..:...x:x.::....:.........:.xx.....:..x::....:...x...:..x.:............x:.....................:...::::.....:x...:.--.:.....x..x:..x:....-----........ 16M2I9M4D14M2I68M1I13M2D19M4I12M1I9M4D27M2D25M1D23M9D27M1D13M1I17M1I51M1I42M5I4M9D29M3I32M4D17M9I261M2D20M5D8M 562/756 74.3% 786/94230402 0.0% 73/756 9.7% 22593343 NA +29984 chr4 + 190214555 48522899 48522898 48523829 931 ACCATCTGTGTGCGTGAGAGTATCTGGCTTGCTGTAAGTGCCGCTTCTTCTTCCGAGGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAGCACTGGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCTGCGAACTCCCCAGTTGAAATTGTCCATACTTTCACCCTGGAAAAGCAAGACACGATTTCTAAAACCTCAAATACATGCTTCTAAATGTACTAAATGTAATATACCAGAAAAACATATACCAAGATGAAAAATACTTAATGCATCATTAAAAGCAGAGTTTCAATCAGCCCTTCAATTTCTTTAAACTGTTAACACACCAT-CAAATATTTATATTTAAAAAGATCAAAATTATTTGGTTGACAACCTGTTTTAACGAA--ATAATTTTCTTGACTTTCTATCTTGTATTACTGGGGACCAAGTAAATCTACTATCTAAGCCATTTCTATTCTAATACACAAACATGAATGAGACCACAAAGAAGACAAATACATCACAGATGACAACAAATAAACAATCCATAACACCAGGCTGCAACTTACCTGCAGCTCCTGGTTAGCAAAAAGGAAAACACACAGAATTAGAAAAAAACGAAGACAAACATTTAAATATACACTACACTTTTGGGGCAAACTCTTTGTGAT------TTCTCAAAC--CCAAAGACTGATTCAAGCTCTGGAT-TAAGCTTTGTGCAGAAAGTCAACATGTGATTCAAAT--CTTTTTTTATGCAAAATATGTTGTGAAAAAGTCAGAGAC-AGACACTTAAAACAACATTTCTATGATACACTTTGGC-AACACAAACTTTAAGAAAATCTTCAAGATTTACAAAGGTTTAATACTTAGTACAATGCAAAAACTGACTTTAAATACCCACATGCACTTGACAA chr4 - 94230402 25928711 25928710 25929602 68300801 68300800 68301692 892 ACCATCTGTGAGCGAGACAGTATCTGACTTGCAGTCAGTGCTGCTTCTTCTTCTGAAGACTCATCAGTATCTTCCTGGTTGGTCAGGTTCAAGCTGGGTGTGCTACCAGAGTACTGACATTCTTGAAGAGATGGTGTGTCTCCTTTGTCAATACTGTCAAGAGAGCGCCTACGAACACCCCAGTTGAAGTTGTCCATGCTTTCACCCTGTAAGAAAAAAA------GTTTGCACACATACATGTATGAATGTTAACATATTAAAACTAATGTACAAATGCAATATAGACAAC----ACAAGTATCAAATGCATTATGAA---CAGAGTTTCAATCAGCCCTTTAATTTTATTGGAA-GTTTAAACACCTTGCTAAAAGATGTTTGCAGAGAAATTAAAA-TATATAGC--ACAA-----------GAAGCAGAATTCTTTTGA---------TTATATTCTTGGGAAGTAACTCAATCTATAATCTA---CATCTATATTGGTATCCAT-TTTATGTATCTGACTAGAAAG--TACAAACACACCACAGACAACAACAGATGAACAAGCCAGGGCACCAGGCTGCAACTTACCTGCAGCTCCTGGTTAGCAAAAAGGAAAACACATATAATTAG-AAAGAACGAGGACGAACACTTAAAGATACTCTAGAA-CCAGGGAAAAATGTTTTATTACATAAGATTTGCAAACAGTAAAAGACTGATTCAAGCTCTGGAGAAAAGCTTTAGTCAAAAAGCTAGTACTTAAAATAATTTATCTTTCTAATGGGAGACTGATTAAAAATAAACTGATGACAAAACACCAAAACCAGCATGCTTATGATACATTTGCTCTAGCGTAACATGTAAAGCAA---CAAACATTAGATGAGGTCTATTAACTAACAC-------ACATGAATCTGAAGTGACCACATTCAACTGACAA ..........x...x..x........:.....x..x.....:...........:..:........x.....:.....:.....x.......:......x.......:....:....::.:..:..:..:.....x.....:.................x..x........:.....x...........:........:...........x..:.:x..:.------x.:.:x.xx.x:.x..::...xx.x.x..::..:....xx....:...x.:x:x..:...x..x.x----.x..:..::x.......:..x..---....................:.....:x..::.x-...x.x.....x.-.x..x.xx.:.x.x:.:.:.:..:....-...x.:.:--....-----------...--.x....:.:....---------..:....x:....:.x:..x.x......:x.....---...:.x....xxx..x..:-xx:...x..xx...:.x....--x.....:...:......::......:..:.....x...x::...................................................:.x......-...:.....:...:....:.....x....x...x.x-::x...:x...:x:...:.x.:------..:x.....--:x......................x-x.......:xx..:....::.::.:x.:.xx:..x.--::...:.x...x:.:.:xx:..:x:..x..:::::x...-.:....:x...x..:...x::.........:..xxx.-.:.::..xx.x...::x..---:x..x...x:xx:....:..x..x:..::..-------.x.:x:.::.x..:.:x......x..x:...... 220M6D66M4D23M3D34M1D13M1I28M1D8M2D4M11D3M2I13M9D35M3D19M1D21M2D101M1D36M1D22M6I9M2I25M1I36M2I39M1I37M1I19M3D31M7D34M 629/876 71.8% 892/94230402 0.0% 71/876 8.1% 22594188 NA +23955 chr4 + 190214555 48527458 48527457 48528354 897 AGAAAGCCCACATCCTTACCTCTGCATCTTCCAATTCAACATCTAAAAAGTCAAAATCCTTAAAAACACCAAACTGTTGTTCACTGCTATTATCTTCCACAGCTACTTCTTCCTCTTGATTTATGTCTTCTGTTGTAGAAATTAGGCTAGTCTGTTGGTCACCGACTTCCAAATCCTCATTAGAAGAAAATACAACCTGATG-CCCGATTAAAAAAAAAAAAAAAGTCCATC-----------CATCAGATTTG--TCACTCTGCGT------ATGAGGTATCAGTA----CCCCAAA---GCCACCGCAGGCCTCATTCTTCAATGA-ATTCACAGCTTAAATTTGGTCTTCATGTTTAACTAG---------------TTGAACACATAGTTAGCATGGCTGCCAGGTGTCACAAGAGATA-AGAAATCT-----------------------------------------------------------TTTTTTCATTCTGAGTTAATACCGTAAGTAAGGTAAATTA-GAAAAGGCAAGCAAGGAGACAGATCATTTCTTCAAGG----------------------AATAACAT-----------GATCTTTAAGACCTTGACACAGGTCTTCATGATTACTCACTGATGGGTTCTTTGGGAGGCCAGATTCTGGACCACAGAGAGAAAGCACATTCATTAGCTTTTCTCTTGTTCTTCGCTAAAGGAAAAAAAAAAATTAAAATGTT--------------------AGGACTGCTGATAAAATAAGACAAATTCTCAAGTTTT-----------------------CATAC-CTATAACAAAACTGATTCTTCTG-------------------TTCTATGAATGTTCCATTTTG-------------------------------------ATATTCTT-----------------------------------------------TATGTACCTGTGATAACTGTGGCCTTTTCCAACTAACAGGAACCAAGGCATTAGAATTAGAACCAGAAGAAGTTGAGGAAGTACTTCTAGTGACAGCAATAACTTTTGGTTTCCCATTTCTTCCAGCCGCACTGTGCTGATCACCATATTTGTTTCCAATAATTGGTGTCTACACAGAAACAAAATG chr4 - 94230402 25931474 25931473 25932640 68297763 68297762 68298929 1167 AGAAATCCCAAGGTCTCACCTCCGCATCTTCCAATTCAACATCTAAAAAGTCAAAGTCTTTAAAAACTCCAAACTGTTGTTCACTGGTATTGTCTTCTACAGCCACTTCCTCCTCTTGAATCACTTCTTCCGTTGTTGAAATAAGACTGGTTTGTTGATCTCCAACTTCCAAGTCTTCGTTAGAGGAAAACACAACCTGAAGATATGGGTAAGAATAGAAATAAAACCTTTCAACTTCTGTAACACCAGAAGTGATCCACCCTGCTTCACACAGTTTAATAGCAATAGCAGCACTGAATGTGCCAGTGTAA---TCATTGTACTGTGGCACACGCAACATGCAGTTCAT-TTCACGACTAGCTGGACTTCCAACTAGATCTTTAAAGTAGAGATATCAT--CCTCTCATTACTGTGAGAGCTGTGGAAGTCTGGACCTCTTGAAGAGTAACAGTAATTCATTGTTTATTATTCCATTTCTATTCTCTTTGCTTTTTATATTTTAATCTTCTATTGGATTT---GTGAATTACTTAACTGAAAACCAGTTTCTAAAACCTTTCTTCATAATTTCACCAGTATCTGAAAACCCAATAGCATTCTCATTTCTGGAGCTTTAAAAGC--AAAATAAAACACCACCACTACTTACTGAAGGATTCTTGGGAAGACCAGATTCGGGACCACACAGAGAAAGCACATTCATGAGCTTCTCCCTGGTTCTTCTCTGAAAAAATATACCAAATAATAATAATCACATAGCAAGGCATCTACCAGAAGTCCAAGTAAA--AACGTAAATGTCTACATTTTTGACTAGTCATCTTATATGCTGACATCCTCTAGAAAGAATCTTATTCTCTTAACTTTTACTGGCTTTCACCTTCTATTAGTTTATTGCTTTGCCAGTACATAATGCAATTTCAAACTATATTTCAACAAATATTTTTATTACACAAATACTGTGTATATTGCATGAGTAACATGCTTGAGACACAATGTACCTGAGATAGCTGTGGTCTCTTCCAGCTGACAGGAACTAACGCATTTGAATTGGAGCCTGATGAAGTTGAAGAAGTGCTCCGGGTGACAGCAATGACTTTCGGCTTCCCATTTCTACCAGCAGCACTGTGTTGATCACCATATTTATTCCCAATAATTGGTGTCTAC-CAAAAACAACACG .....x....x:x:..:.....:................................:..:........x..................x....:.....:.....:.....:.........x.:.:x.....:.....x.....x..:..:..:.....:..x..:........:..:..:.....:.....:.........x.-:x:.:x...:..x.:...x...::.:x..-----------..:....xx..--:...:....x.------:.xx::..x..:..----.x.::..---....x:.:.:---.....x.x.x:..:-.:x.:..:.x.:x.x..x:.-....:.x:..:..:.---------------..x..x::.x..x..x...--.:x.:x:x.::::::....x.:-:...:...-----------------------------------------------------------.....x:...:.:.x:.xx..::.x.xx.---..:.....-xx..xx.x..:.x..xxxx:.:.x.x........x::----------------------....:...-----------..x......:.x.--:.x.:.::x.x:..:x.:....:.....x..:.....x..:..:........x........x.................x.....:..:..x.......x..:..::..x.x.xx....x.x...:x.--------------------..:.x.x.x::....--..x::....x:::.x:....-----------------------...x.-...x..x:..x..x.....::.:-------------------......x.:.x.x::::....-------------------------------------.....:..-----------------------------------------------x.........x....:......:..:.....:..:........:..x.....x.....:..:..x..x........:.....:..:.x:...........:.....:..:...........x.....x........:..............:..:..................-..:......x.:. 202M1I29M11I11M2I11M6I14M4I7M3I10M3D14M1I20M1D15M15I19M2D22M1I8M59I29M3D8M1I37M22I8M11I13M2D128M20I15M2D20M23I5M1I23M19I21M37I8M47I173M1D13M 639/883 72.4% 1167/94230402 0.0% 298/883 33.7% 22595984 NA +14190 chr4 + 190214555 48531152 48531151 48531504 353 TTACCTCAGATATATCAAAATGAAAATCTAAGGTCTTCCCAGGCAACTCCTTAGAAACATTATTAAAAATTTTAGTGAAGGATATTTCAGGAGAACCTGTATCTCCTCCATAGGTCTTGGGGATATCACTGGGTACGACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCCAGTAAGGACTCTGGTTTAAAAAATAATTGACACGTAAAAGTTACAAATGCACATTCAACTAAGAACAACAATTTACTGTACACCATAAAAATATTATTTCTACAAAAATACTTGTAAAAATTATTCATTTTGAAGATCCTTAA--TGAAAGGTTTGAGTTACA chr4 - 94230402 25933463 25933462 25933786 68296617 68296616 68296940 324 TTACCTCTGATATATCAAAATGAAAATCCAAGGTCTTGCCAGGTAGCTCCTTGGAAACATTATTAAAAATTTTCGTGAAGGAGATTTCAGGAGAACCTATGTCACCTCCATAAGATTTTGGAATATCACTAGGTACAACGAGGCTTGCTGATCTAGACACCACCAGTTTCAAGATATTGAGGGCTTCCTTCCAATATGGGCTCTA----AAAAGAAAATAAATCCATCA---CCAAACAATCACTTTGAAT--AATACAGCAATTTTCAATGTACAGTAGGATTTTTCTT----------------------TGACTCATTTCAAGGTTCCCAAAGCCAAAAGCTCTAATTTACA .......x....................:........x.....:.:......:....................x........x...............:.:..x........:.x:..x..:........:.....:..:..:..:..x..x.xx...........:..:..x..:..:..............:..x..:....:----....:.x...x:.:x.:.x.---::.x.x.xx...x..x..:--.:x...:......x.x:.::..x:..::.x.x..x..----------------------.x.:......::.:.x...:x..--::....x.:.:.x..... 205M4D20M3D19M2D37M22D23M2I18M 242/322 75.2% 324/94230402 0.0% 33/322 10.2% 22597689 NA +17914 chr4 + 190214555 48534539 48534538 48535883 1345 ACTCACCTGTACATATTTGCCAATAATCTTTATGATCTCCAGATTAAACTGCTTGGCTGGGGCTGCAGACAGGTCAATATGACTCAATAGACTATAAATAATCTGTAGTAATGATTGCTGCATACTGGACAATCCTTTCTCTAACAGCTA--AAAATAATGTTAAAAGTAATATTAAAGTATACTTTAATCAGGTTGAATAAAAACTCAATATTTACATTTGACAGGTTGGAAAACAT--AGATTTAGCCTATGAGTTTATAGTTATGTGGATTAGAAATCTAGAGACTAATAAAGTGAAAGGCAGAGTCTATTACTGTTA----TTTTTCCTTGGTTCAGAAAGGAGA---------ATTAGACGATAACTTTTCATCTAAATCATGGTGTTTTATTTCC----TTAACTAATTTAGTAGGTATTACTTTA-------TTATAAACTGACAAACATTTTTAGTGACTAGGAATCTCTTGCTTTTGACTTTCTCTTTGTGCCTATCTACTTAGTAA-----TTTACTTTTCTGGGTATAAAGTTAC--------------------TTCTTAGGCATCAAATAGATATTAACTTTTTGTGCTGTTCTAGGGCTACTTTATCATCCATTTTTTGCTGTCTCAAAATCATATTTT----AGATAGGAAGCAAATGTATCATCAAACTAAAAACTTTTCCAGAAGAAATA------CTTTTGTAT-----GCTGTAATTATTATTCTAGAAAAGATTTCTAAGCTAAAACCTAATTTTGTAGAAATAAAA-------ATTATAACCATTCTCTAGGATCAGGACCACTAAAAACCCATTTTCCATTTTTAATTAGGTAAAGTGTATATTAT----TTTGAGTTTCATGT----CACTTAAG----GACAGTAAATAAGGATATAAACACTGGACATGGAAAAAAAACCCACCTTTATAAAAACTTCTTTTACACTTGATAGGAAGTAACTTATATTT-TTATCTTAAAAAATTGTTAACTATGTTGACTGTCAGACAATTTGAATATCAGTTAATACCAGT-GCTGCTTCTGCATAT---AAATCAACTTGATAAGGTGCCACAGAGTAGTTAAAATATATATATGTGTATATATATACACATACACACACACACACACACACACACACACATATATATATAGTAAATAAGAAA---ATATTTTTGGTAAATTTACCTCTGCAAGATAAGTCACAAGATTAAATGTTGTATCTGAGAAGGAGTCATGCAGGTATCTGCACACGACATTGATCCAGTTAGAACAGTCTCTGGAATACGTGTGTGTACTGTACAAACTCATCATGTGTGCCAGATTGACAAGTGTTGGGCATTTTTCTTCTGCACAAACCTAGAAAACAAATAAAATTATTTCATTCACCTAAAATAAA---GACACAAGTTTAACTT chr4 - 94230402 25935778 25935777 25937096 68293307 68293306 68294625 1319 ACCTACCTGAACATATTTACCAATAACTTTAATGATTTCCAAATTAAACTGCTTCACTGGTGCTGTGGACAGGTCAATATGACTCAGAAGACTGTAAATGATCTGTAGCAAGGATTGCTGCATACTGGATAACCCTTTCTCTAACAACTAGGAAAGAGATTTTAAGA-----ATTAATGC---CTTTAAT--GGT--AGCAAGAAATGAAAATGAACATT-AAAATGCAGACAAACTTCCATACTTAGT-----------TATTTTTCCCTACAATAAATTT---------TAGTGTGCCAC------TCCATGACTTTCTAAATCTTTTTTTTAGCTTAAAAGGAAAATAAAATGCAATAAAACAATATTACCTCTTCTAACTCAT-----TTTCCCCCCAAATTTCACAATGTCTGTCAGCACAGACCTAGAGTACCTAATAAA---AAAAATACTTCTTACTAAAAGAAGTGTTTTCTTTTAG--------TAAGTGCTAAAATAA--AGTAAAAATCTCAAAGCTGCATGGAAAACAATTACACCCATGCATGGTATGCACAGTCTTATGAATGAAATATATAGGAATTCATT-------TGTAATAATATTTACGTATTTTTTCCTTATCAGTTTGAAGGAATATTCTTCACGGACAAGCTCTAAAAGCTTT-TCACATCACGTACTTTTTTAAAGGCAACAACAGTTCGTCTGTATAAGTGGTTGGCAAAATCATATT------GAATTCTATCCTTAAAT-TATCTTTGATGATATACTATGCATTACTTACAAATGAACTTTGAAATTAG---TTCTTAAGGACAAATTTAAATGTGTACTTGGCTAAAAAATGTATTTTAAAATATGCATTACATGTATTCTACTAAAGTCAAGACTGTGCATAT---TTTACTCATGTAGCATAGAGCATAA--CTAACATTACAAAA----CAGTAGTATT--GTAAAAAGGGATCTGTGGTTATTATTTCAAGGCAC-----ACTCCAGTTGCTGC-----------ACTCCCAAGTGGCAGTAGTCATCTCTTTTCCATATCCTAAAACATTTTATTATTATTTCCCAT----GATGAAAGATGT-------TCTTTTCCTACCAATATTCAGAGTCATATGAACAGGGA-----ATAGGTAAAGAGTCAACATGAAATACACCTTCATTAAAAATTTACCTCTGCAAGATAAGTTACAAGGTTAAAGGTGGCATCTGAGAAGGAGTCATGCAAATATCTACACACAACATTAATCCAGTTAGAACAGTCCCTGGAATAACTGTGTGTACTGTATAAACTCATCATATGAGCCAGATTGGCAAGAGTTGGTGATTTCTCCTCTGCACAAACCTGAAAAGC---CAAAAGTAT---ATACAATTACATTACAGATGACAAAATTTTAACCT ..::.....x........:.......::..x.....:....:............x:....x....::...................:x.....:.....:........:..x.................:..:.............:...--...:x:..x....:.-----.....x.:---.......--...--.::..:..x.x..x..xx.....-:.x.x.:x.:x....x.--.x.:....:-----------..x..x.x:xx.:x.x....:.---------..:x...xx.x------..:..x...x.:x----:....::..:.:.:.:..:.:.:.---------..x.:..:...x:x::..x.....x....-----...x:::..----..x..x.xx.:x..x:.:.:x:x::..-------.x.....---.x...:.:..:.x::x.xx..:.:.x.:..x:...x.--------.xx....:x.xx..x--.....-----.:x.xx:.x.xx..x.x.x.:....--------------------x.....x.x..x.....x...xx..:.:x..-------.x..:x:x..:..xxx:..::x..::..::::x:.::..:xx.....:.----:..:.:.xxx:...x.:x.:-...x.::.x:x......::.:.:.x..:.------.x.:.....-----.:..xx.xx..:..x:.------..x.....xx..x...:-..x:....xx..x...xx.-------x...:..x::xx..:.:::..:..---:x..x..::x.x.x...xx..x.x..x..:.x....:x:.:....x.----.x..x:..x.....----:...x...----...x..:x...x---.x..xx..:xx::...:..:x.x..--.:.x.x...:....----.xx.x::.:.--:..::...x:.::.:.:x..-....:.:..::x.:-----...x::x.x:...:-----------.x.x:..:x.:::.x:...-:::x...:.x.....---...x..x:..:x..xx:.x:.x..x----.x.:...x..:.-------.x.x.x:x...xx...:x..x.xx..:.::x...x:x.-----...x:..x.x...x..:.x....---.:x..:x.x:x.......................:.....:.....x..x.:....................::.....:.....:.....:.................:........xx.............:...........:..x.........:....x.....xx....:..:.............::...:.---:....x...---..x..x:..x.x..x.---....x..x......:. 150M2I15M5D8M3D7M2D3M2D23M1D17M2I9M11D22M9D11M6D13M4I24M9I29M5D9M4I27M7I7M3D37M8D15M2D5M5I25M20I31M7D49M4I20M1D29M6I9M5I17M6D17M1D19M7I24M3D47M4I14M4I8M4I12M3D25M2D14M4D10M2D20M1I14M5D14M11D19M1I15M3I25M4D12M7D38M5D23M3I199M3D9M3D16M3I16M 806/1221 66.0% 1319/94230402 0.0% 222/1221 18.2% 22598761 NA +3199 chr4 + 190214555 48535557 48535556 48535621 65 AAATATATATATGTGTATATATATACACATACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395806 8395805 8395870 85834533 85834532 85834597 65 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:..:...x.:::...:...::x:....xx.:.................x.....x..:x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 40139751 NA +3075 chr4 + 190214555 48535559 48535558 48535623 65 ATATATATATGTGTATATATATACACATACAC--ACACACACACACACACACACACACATATATATA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x.:..:.:.x..:....:..::.x....:--.:.................x.....x..:x... 32M2I33M 49/65 75.4% 67/94230402 0.0% 2/65 3.1% 40139755 NA +3020 chr4 + 190214555 48535563 48535562 48535624 62 ATATATGTGTATATATATACACATACACACACACACACACACACACACACACATATATATAT chr4 - 94230402 4481692 4481691 4481753 89748650 89748649 89748711 62 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .....x....:.:...:.:....x...:.....:x....:..x.xx...:.:..:..:.:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 44053871 NA +3347 chr4 + 190214555 48535578 48535577 48535639 62 TATACACATACACACACACACACACACACACACACACATATATATATAGTAAATAAGAAAAT chr4 - 94230402 79214688 79214687 79214749 15015654 15015653 15015715 62 TATGCATATGCATACACACCCACACATATACATACATGCTTAAATTTAATAACTAAGAAAAT ...:..:..:..:......x......:.:...:...:::x..x..x..:...x......... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -30679110 -63551292 +6804 chr4 + 190214555 48539953 48539952 48540071 119 AGCATAACATTTGCTTACCTTTGCTATTCGACTAGCTGTTTCTTTGCAAAACTGAGTTGGGCTGTCAAAATGCTGGATTAAGTGAGGCAATAAGCAAAGGATGTTAAGAGGAAAGCCTA chr4 - 94230402 25938226 25938225 25938343 68292060 68292059 68292177 118 AGCATGAT-TTTACATACCTTTGCTATCCTGTCAGCTGTTTCCTTACAGAACTGAGTTGGGTTATCAAAATGTTGAATCAGATGAGGAAGTAGGCACAAGATGTTTAGGGGAAATCCTA .....:.:-...:.x............:.x:::.........:..:..:............:.:........:..:..:.::.....x.:..:...x.:......x..:.....x.... 8M1D110M 91/118 77.1% 118/94230402 0.0% 1/118 0.8% 22601727 NA +43274 chr4 + 190214555 48540245 48540244 48540971 727 ACTATGACTATTTGCAAAAAGCA-------GAAATTAGTAGATTTCAAAACAAATGATTA----------------GTTTACATTTTACTGCAT----AAAATGCAAAGTGCT-GGTGCAATTATATT----AACATCACCTGACAATTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGTGCACGGTCATTTCTTGTGTAGATGCTGAGGTAAAACCCTTAAGGAAGAGCTGCTGAAGTCCTGGAAAATTAGTCCATTTCAATTTGCTTTGTACATTTTCAATCTTCTCTCGACTCTCTGATTTATCCAAAGGCAAATGGATAAGCAGTTTGTTGAGAAGCCTGAGAGCCAGGAGGTATTCATATTCATAATCTGATTCTAATAAAGATGCTGCTATCCAAAAAATGGTGGCCATCAAGTTGGTAGGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGCTTCTAGTCCTTGCTAAACTACTGCTATGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTCGTCGGTCACCAATCAAACTTAATCTCAAAGAGTTACTTCTTGCATTACTGTTATATCCCAAATAACTGCTACTATTAATGGGACTTGTGCTTAGATTGAGTTGTCCAGTGCTTTTCCTGTTAGCTGCATACTTGTTTCCCATTATAGGATCATGATATGAGGTTCTTAAAAAAAA chr4 - 94230402 25938803 25938802 25939561 68290842 68290841 68291600 759 ACTACCAACAGCTACAAAAAACATTTGATTGAAGGCAGTTCTTCTCAAGGCAAATGCATAACCCACTACTGATCTTGATTATACTTCACTTGATTAAAAAAACACCACATCTTCATTACAATTATATTCACTAATGATACCTGCTAGCTGAGAAGGATCCACCAAAGCATGCCTGGAAATTGTGATGAGTTTACTGAGGAGGTGAACGGTCATTTCTTGTGTGGATGCTGAAGTAAAGCCTTTTAGGAAAAGCTGCTGAAGGCCTGGAAAGTTATTCCATTTCAGTTTATTCTGCACCTTTTCTATCTTTTCCCGACTCTCCAATTTATCCAGAGGCAAGTGAATGAGAAGTTTGTTGAGCAGCTTGAGAGCCAAAAGGTACTCATACTCATAGTCTGACTCTAGCAATGAAGTTGCAATCCAAAATATGGTGGCCATCAGATTGACAGGATCAGTAGTTGGCTGCACATCATACATCCCTCCCTCTCTCAGGGAGGAAAGGCTTCTAGTCCTGGCCAAACTTCCACCATGATTTATCCTTCCATCCATTATATCCAGTGTGTTGCTCCGTCGACGGTCACCTCTCCTCTCACTGATCAAATTCAGTCTCAAAGAATTACTTCTTGTATTGTTGTAGTATCCCAAACAACTGCCACTGTTAATGGGACTTGTGCTTAGATTTATCTGTCCAGTGCTTTTCCTATTAGCTGCATACTTGTTCCCCATTACAGAATCATGGTATGAGGTTCTAAAATAAAA ....:x.x:.x:.:......:..-------...:x:...xxx.:....::......xx..----------------.x...:.:..:...xx..----....::.x.x:.x:.-:x.:..........----..::x:.....x:.::..:..............x.:...::....:.:x.x:....................x.................:........:.....:..:..x.....:...........x........:...x.........:...::.:..:..x.....x.....:..:........::.........:......:..:..:..x...........x...:.........::.....:.....:.....:.....:....::..x..x.:...x........x.............::...::...x........x.:......:........:...::......:..:....................x..:.....x.::.:...:.......x........................:.....:..x..........x:.xx....::......:.:.:.........:..........:...::...x:.........:......:...:.......................x.x:.................:.................:.......:..:......:...........x...x.... 23M7I30M16I18M4I15M1I14M4I627M 581/727 79.9% 759/94230402 0.0% 32/727 4.4% 22601442 NA +8655 chr4 + 190214555 48542002 48542001 48542176 175 TAGGTTGCCTGGTTTAAATTCTTACTGAGAAAGGGCAGAAAGAAGATCATAATGCTTCATGGTTTCAGCCAAAGTATCAATTGCAGATTCCAATGTGAGAAGAAGCTCAATCACAAATCCCTGGGGGGAAAAAGGCAGATTTTAATTAATTATGC--TCTGGAATAAAGAAACTGCA chr4 - 94230402 25941298 25941297 25941472 68288931 68288930 68289105 175 TAGCTTGACTAGTGCAAGAACTTACTGAGAAAGAGCAGAAAGCAGATCATAATGCTTCATGGTTTCAGCCAACGTATCAATAGCAGATTCTAAAGTCAGAAGCAGTTCTATGACAAAACCCT--GGGGAAAGCCACAGGTCATTATAAATTATGCAATGTGCAGAAGGGAAATCACA ...x...x..:..x:..:xx.............:........x.............................x........x........:..x..x.....x..:..x..x.....x....--.......:xx:...:.:x.x..x........--.x..x.:x.::....:::.. 122M2D31M2I20M 135/173 78.0% 175/94230402 0.0% 4/173 2.3% 22600704 NA +24222 chr4 + 190214555 48543789 48543788 48546294 2506 AAGAATATAAGGAAATACCTGTGCATCTTCTCCTGGATCCCCTACAGTTTCTACAAGTCTGGAGAGAACATCAGAAAGTGTAGTTGCAGTGAGAGGCTGCTTTAGGGCCCTGAAAATCTGAAAGGATCTCCCAGCATAGTGTCGAGAAGAACAGGAAAGTGCTGTTTGCAGAGCAACTTCACTAAGATGATGTTCCAGATGAATTCCTTCTGTGAATGCAAAGGAAACGAGTAGGTTGTTCTTGTTCTTTAGAATACTAATGGGGTTATAATCAGAAGTGAATCATCTTAAAGCTAGCAGCTAGCACACTTCCTGGCTCTCACATTTTATAAGTCAATGCTTTTTCTTTGCTTAAACTCCATTTGCATTTTAGATGACCCTTTAATCTTTACGGAAGCAATCCTTCAGACCAGGGT-TTCTCAACCTTGGCACTACTGACCTTATAAGCCAGAAAATTCTTTGCTGGAAGGGCTGCCCTGAGCAGGGTATGA-----TGTTTAGCAGTGTCTCTGGCCTCAACCCACCAGATACCAGTAGTAACCCCTTGCCCCCAACCCATAACGGTGACACTGTCTCTAGACATTGCCAAATGTCCCCTAGTTGAGAACCACTGCTCTAGACATATACAATTTGACTATGATTTTCAGAATGTGTTGAATTTTAGATTACTGAAGACTATACCAGCACAATTTTTTTTAAGTTTCCAATTTCTATATACGTCCGTTTAATGTATTTTTTCATAATACGCAAT--TGTATTGTAATTTTATGATGCCATCAAACACAAAACTAAGGAGCCTAGCATTTCATAGATAGCACTCATTTTTAAGTAGTAACTTAATTTTTCTTCAGTGAAAACAGATCTGTTATCATTAATAAATTAAAAGTCTAAAACTTTTAGAGGTATCACAATATCAACTATTAACTTTTTGCTAAGCATTATCAGAAATTGACATCACA------------TTAAA-ATGTCACTAAAACTAAAATATTTCTTAAAAGATACCTGAGCTTGACTGCTTAAAAACAGAAACCACATGTTTCAAAAATGTAGTTAACTGTTCAGCACTCTTTATGCTAGGATTCTTGGCAGAAACATCCTCATGGTTCCAAAGGGGCCCTCTTTTTC--------TGAAAACAGA------------GAACAGATGTAATTTCCTTGGATTTTCACTTGTGATTAACAGTTGTACTCACACTTGCCTAAATTACACCTTTACAATTAGAAAGGATGGTAGTTGAATAAATAGGTCACAGTCTACTACTACTTAGGCACATGAATATGTAATGATCTACAGCAAGGAGAGAAAGATCTCATTTCAGTGTCTAGCAACAGACCAGTCAAATTCTCTCAGACGTA---------GTAGAAAAAGATGCCAAATTTTGCCAA---GTGTGAAGCATATTGGTTACTGCTTATGTGTTCCAGGTCAAAATATAATCTGTATTTAGATTGTAATGCAAAGAAAATAATTTGCTGGTGAAATGCAATGAGAATAATTTACTAGCTAAAACTACAGGGAAAGTTTAGGACAGAGTAATGTCCTCTTGATTCTTTCTTCAAAACGTCTTTGTGTTCTTGGCCACCACCTCAGTTAAGCTCTTTATTAACACAGGCCCAA----AGTGCCCTGAGAACCTGCTACGCACTGCTTCTGGTTCCTTCCACCTCTAATGCATCCTACACGCTGTTATGGGGCTGATTTTCTCCACATACTTATTAAATGA--TGCCTCCCACCCTCCTCCCAGCTTAATGATTTTCAATATAATCTACAACCTTATGGCCTGGGCTTCATGGCCCGCCAGTTTGAACTCTCCCAAGCTTTCCATAATTGTCTAGAACAACTCTCTTTTCTCTGCATTACAGTCAGAGTGGATTCCTCACCATTTCCAAACACATGGTTTTCTTGTGCTCC---TGTGATTTTGTTCTTGCAATGGAATACCATGCCCTTTCTCCCCACCT---ATATTCCCTCTCTACTTATTGTGTCTTGCAA--AGAGTAGACCATAAATAAATATTTGATGACTGAATGATAATGTAGCTA-----------ATAAAAGTGAAATATATATTCAGATAATACTCATTCTCTTTGGCCATTAAATAGCCAGATATGATTAAAGTCCTGAGGTATAACTGCACTGGCACAAAAGAGTCTTTGATTGCATCCTAATTTTCAAAATACTGTGCAATACAAACCTGTGTATTTCACATCAATGGTATTTCAGACAACAAAAATATGGCTCATAATACCTGATCAATGAAAGAATGACTTAACACATACACTGCTGGGATGATAAGAGCTGCCAGTGTTACCTTGAGGTAATGAATTCCATGAGGGTTTTGACTTTTCCATCCTGCTCCACTGAGATGTCAACCTCATTGAGGATAGTGGTGTGCAGATGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTGAGCTAAGCCCTGAGTCAGTCATAGGGGAGGGCTGGTAATCAGGTATAAAATCGTTAATGCCTGCTGAAAGAGAA---AGATCGTCATGA chr4 - 94230402 25942098 25942097 25944026 68286377 68286376 68288305 1929 AAAAAAACAAACAAATACCTGAGCTTCTTCTCCTGCATCTCCAACAGTTTCTACTAATCTGGAGAGAACATCAGAAAGCGTAGATGCAGTAAGAGGCTGCTTCAGAGCCCTGAAGATCTGAAAGGATCTCCCGGCATAGTGTCGAGAGGAACACGAAAGAGCAGTTTGCAAAGCAACTTCACTGAGACAGTGTTCCAATTGAAATCCTCCTAT------ACAGGAAAATA----------------------AATACT---------------------------------------CAGATATCACAGTGCTTCATTAAAAAATCCCACAAA--AATACCTG-----------------------ATTTTAATAAACAGTATAACTGTT---GAAGTCATCCTTAACTTCAAAATATTCTCATCTCCTACATTTTT--CCT-------CAAGGAATACCCATTTGAAAGATCTTTCCAG----GCATATGAACATGTGTTCCACAATACCT--------AACACTTGAGAGACTTGT-----------------------------TGATAATG---------------------------------------------AAACACTTATGATTTGAATGTCATGTCCGCAAT---------------------------CAACTAGTAAGATATTTATCTAG------ATATCTAGAATATTACATTTAAA------TCTCATTCAACAGAACCATGAACTGAAAT------GTGCAAT---GCACAAGAAAAA-----TCAGTATTTTTTAGA---------------AGCAGGAG-----------------------------GCTATCAT----------AAAGTC---ATTTTATAGAG------------CAATTGTAAACTTACTG----GCACT----GAAAAAAAAATCACGCAGTTTGCAGACTTAAACATTCTACTACATTTTGACTGTTTTCTAGCT--TACCTGAGCTAGACTGTTTAAATATAGATACCACATGCTTTAAAAATACAGTTAACTGTTCAGCACTCTTTATACTAGGGTTCTTAGCCGAAACATCTTCATGATTCCAAAGTGGCCCTCTTTTCCTAAAAATGTAAAAGCAGAGCAAACGTGACAGAATGAAAGTCACAGCCTTTG----TCACTGGT-ATTAAATGTTATTTTTGC-CTTACGTAA---------CTGCAA-------------------AATAA-----------TCTACTGCCTATCAGATAAATGAAGCCACTTAGAATTGCAGACATAAATCAAAGAACTCTGACAACAGCCTAATATCACTACAAT--AATACACAGAAAAGTAAGGAACAGGGAAAAGCAATGTATCAATTCTAACTGAACAGTGTGAATC-----------TACAGAGATGCTCTCCATTAGGCGATATTCAGT----------TACCTAACAAAAAGCCAGTTGCAG--------CTACCACCATTATGCAACAGTTAAAACCACA---------------------------------TTCTTTCTT------ATCTTTTTCTTCCCAGCAA----------TAAACT--------ACACTATTCTAATTTCAGGGCTATGAAAATCT------------------TTTTTT----------------------GTTGTTGTTGGCAAGTTTCTCATCAACTTTTGATTAAGTAAATTAGATTTCAGCCTTACACGATCTTGAAAGCTTtatatatactatatatacatatatacta--------------------tatatacatataAACT---------------GAACAAATGCTGCTTTTTTTTCTTACAG-------ATGTTCTTTGCCATT-----------AATTCTCCCCTCCCCCAAATCCCAGCTTTTTTCTCTAAGTCAAT-CCATAACTTTTCCACAAATCTTGCAACTTCCTGATCATTTTTCTGTATTTTTTCACCAGGATGGA-----AGAAAATATGTGGAAAGC-AATGATTATAAACCTATGTGGAGCATGGTAAAAGACTTTTAAACACTCAGGACAAGGAAATTCTTTCAAATAGTTGGAGAGTTAGAATTGTTCATA------------AGCTGCAC---CACATAAAAACCCTTCAGGG-----TTAGACTCAATATTCTTACTGATACAA-----------------------CATTTTTCTTAACAAAAATG------------------------AAAACTAA------------------------------------AATCTTACCTTGAGGTAATGAATTCTATGAGAGTTTTTACTTTTTCATCCTGCTCTACTGAAATGTCAACCTCGTTGAGGATGGTGGTGTGCATATGAGACATGGCAGCACTCGTATTTCCTAAGCTGATGCTAGAAGAGGTAGAACTTGAACTAAGCCCTGAGTCAGTCATTGGGGAGGGCTGGTAATCAGGTATAAAGTCATGAACACCTGCTGAAATAAAAATGAGATCATCATGA ..:..x.:..:x.........x..x..........x...:..x...........x.:.....................:....x......:...........:..:........:.................:..............:.....x.....x..x.......:............:...:::.......:x....x....:..:.------.x......xx.----------------------......---------------------------------------...x..x....x.x.:.x::.xxx.x..:::.:..:--...:.:.x-----------------------......:xx:..xx.x...::x..---....:x......x.xx:..:::.-......x.:::x:..:.x:.--...-------..:::...x.::xx:..:...:x..x:..x.----.x:.....-----....:x:..:.::..--------...x.x:x...x..:x..-----------------------------...:.x..---------------------------------------------.:...:x..::......x.:.x..x.:.:x...---------------------------xx..:..:.x:..x...x.:x..------..x....x.xxxx.x.:.....x------.:....xxx..:x..:--..x.:..x...------:...x..---:.....:.xx..-----::..:....:x....---------------..:..x.:-----------------------------.:......----------......---.x:..x.....------------...:.:.x.....x:..----...:.----....xx:.x.....:------------.....-..x::....x.x:.x:.x.:...::..:xx--..........x.....:.....x.:...x........:..:......::........................:.....:.....:..x........:.....:........x...........:.--------.:...:....------------...:::.x..x.:xx....x.----.....x..-.....xx...:.x:.::.-...:.x...---------:.:...-------------------.....-----------......:.:xx.:..::.x.....xx:::xxx..x:.:...xx.x:.:xx.....x...xxx:x.xx.:...::.x..xxx..:.--...x.x.xx.:.x...---------.x.:.:x..x:.::...x.:.x:.::.---.......x.-----------.:.xx.x:..:..:xx:.:.::xx...x..x..----------..x:xx.x.:...::x.x....x.--------.x.:x.xx..x..x:.x:..:......:...---------------------------------.........------:.....x.x...:::..x.----------...:..--------....x:x:.:..----..x..:x...:..:..------------------..::..----------------------.:....:.x..xxx.x..:..x:..xx.x:.x.....:.:.--.:xx.::..x...:x:x.x.x...:.x:::...xx.....x.x..:.xx.x...:xx..:--------------------.:x.:x.x:x:..:..---------------......x.x::x:..:.:.x:x......-------:x:...:.::.....-----------::..:..::x.x.:..---.x:x.x:..x..::.x:..xxx...-....:x.:....:x.xx.:..---.xx....:xx..xx:..x:...:.:..x:x.--..::.:..-----.:x......x..:x:.x:-......x..:x.x...-----------:......xxxxx..x.:.:....:xx.x:xxx.....:.:x:::x:..::.x..::...xx..x.:.x.------------.:......---....x..:.::.:..x.xx.-----.x.xx:....x..x..xxx::......-----------------------:....:xxx:.........:------------------------..:.x.:.------------------------------------.:.x.....................:.....:.....x......:..........:.....:...........:........:..........x...x..x...........xx................:....................:....................x..........................:..:.x..::..........x.:..---.....:...... 213M6D11M22D6M39D36M2D8M23D24M3D23M1I20M2D3M7D31M4D8M5I15M8D18M29D8M45D33M27D23M6D23M6D16M2I11M6D7M3D12M5D15M15D8M29D8M10D6M3D11M12D17M4D5M4D15M12I5M1I30M2D126M8I10M12I21M4D8M1D18M1D9M9D6M19D5M11D85M2D16M9I27M3I9M11D33M10D24M8D31M33D9M6D19M10D6M8D12M4I16M18D6M22D41M2I60M20D16M15D28M7D15M11D16M3I25M1D21M3I31M2I8M5D18M1D16M11I69M12D8M3D20M5D27M23D20M24D8M36D224M3I12M 1262/1848 68.3% 1929/94230402 0.0% 739/1848 40.0% 22601691 NA +15060 chr4 + 190214555 48547573 48547572 48549626 2054 AAAGCAAATACCTGTGAAATTATAATCTAAGTGTGCAACTTGTTTGACTGTAAGCACCCTGGGCTCATTAAACTCCTTGTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACTATTAATAAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCTAAAAAGGAT------AGTAGAGAAACATTATC-AATAAAGAGAA-ATAATGAGTATTCTTACTACCAAACTCACATTTTGAAGAAAAGGAGAAATTA-TATGAAAGATTTCATGGAAGGTGACATATTATATGGTTTTTTATTGCCCTAGAGTTCTTATATACTTTTACAATAGCCTACTGTCTTATAGTACTAGGGAGACTCAAGGTAAGCTAAATG-TGTTTCATGTCTAAAATTTAGTGATCTCTTAAAAATTATTTCTGTTACATAACATAAAAAAATTCATGGAAATGAATTTTTTTTTTTAAAGGCAGGGTTTTTTGTGTGCTTAGCACATAACAGAAAGTACATGATTAACTGAAGGAATGATGTAATACACCAACATTAAGTGTGCCCATCAGGAAAACTTATAAGGAGATGGCTATCTGGACTTGCTTCAGGAAGCCAATCCTATAAGCATCAAATGTATTATAGATATGGTAGATCCCACATGTTTGCTACAGAAGGCACGATGGAGTTTCAGGTATAATAATGAGGCTATCCAACAACCCAGTTCTTTTGGGAAATACTTAGAACCTATCTCAACTTTTCATTCACTCTGAAAGTTTCCAATCCCAGAG----TTAAGTTAATTTGACTCTTGCCACAGCCACA-GAATTTTTCCTTGGTATAGTATATGTGTGTTTGTGTGTGGGCAGGCGAGGCCATAAGATAGGAATAGGAATGGGGGTAATAGACATGTTTGTTTGTGGTTAGAAGAGGGGCCAGACATAACTCCCCAAGAGA-------CCAGAGGAATCATAGTGAAAAGTGTCATG--GAAATAACATAAAAATAACAGGAAACA-----------GAAACACATAAAAAC--TGTCATAAAACCATACTGCTTTTAAATTATCATAAAAATATAACATGAAAGAATTAGAACCAAATATTTATTACCTATAAAAATTGCATGAAGAAGAAGATGGAGGTAGCTTCCCCATTCCACCTTCACACTATGATCAATGATGAGATCAGTCAAAAGGATCACTGCTATGTTACACCTATGACAAATAAGAGTTTCATTAACGTTTTACTAGATCTCAGTAAACCTAGAGAGAATTTGGTACAAAATTACTTGAAGACTTTAATATCACATTTCATGGAAAAATACAACTTATCAAGGAAAAAGGAGGAAAAACAAATACAGCTGAAGAAAACGTTAACCATTAAGTTAAAGAGATGGAACAGAACATAAGGGCTAAGGGTTCCTTGAACTCAGGAGCCACATTTTCTTCATCTTTCAACCTTGAGACTTAGCACACTGCTTGCCACAGTAGGTGTTCAATACATGTTTGGTGCATTAATACATTTTGAAAGAATGCAGTAATTGCTCTATTGTGATTTTGCTAAGTAGAATTCAATTTAACTCGATGCAAAATAATAGTGCCTACCATAGGAAAGTCATATTTTTCAGATGTAGTAACTGGGTCCCAGAAAGGTCAAGTAACTATGCCAGACACCCAGAAAAGCAGCAGCAGAATTAGATTTAATAATATTAATTTTATAAAGTTAGAATTCTGAGTTTTTTAGATTTCTTAGAATCTAAACACATTGATCTGTGTTGCAGTATCTCCATAAAGAAGATTGCTTTCATTCTGTGTTGTCAGATAGCACAAAGAAAGCCGACAGTGTTCAGCAGCAACTTGGTGCATATGTAAAAGGAATGACGCTGTAGTCCACCTGTGAAGAGGTAATCCAGGTGATGACGTTTCAGGCACGTAATCCACCAGTGGTGACCAGCAGCCTCCAGCTGGTGGGAAGGGCAGTGGCTCTCCTTGGTTATGCTCCATCACTTTCAGTCGCCAATTAGAATAAAGTGGCATTGAATCACCTA chr4 - 94230402 25945630 25945629 25947149 68283254 68283253 68284773 1520 AAAGCA--TACCTGTAAAAGTATAATCTAAATGTGTAGTTTGCTTGACAGTAAGCATCCTGGACTCATTGAACTCTCTGTTTCTGAGTAGGACAGAAGCAACTGATTGGACATTACTGCCAGATCCCATCACTATCAACAGATGCAAAAGCAGTCGTTTACAATGCTCATAAACTTCAGGGTGACAGTGGTCAAAACCTAACACAGACAAAAAAAATGGAAAAGTTTTATTAAATGCAGAGAGCACATTTAATTTGATTATTATAAAAATAGCAGTTCTTC---------AAATTGTTATGTTATACTTTAT-CAGGCAGACACATAATGAAATAATTAACTGCACACGATTCCTGCTAGAC----ACAGAAGCTATTTCTTCCATCCT----------------------TAGATGCTTTTTCAGTGTTCAAATATAAAAAC-------AAAGCACATCGTTTAACAAACATAAATATATCC------------TCGTTTCTTACAGAGCAGT------------------------CAGAAATTAGTACGTTCTCTGTATGAA-----AACTACAACAAAGACAAA------CAGAAAGAAAAA--ATAAGCAGAATTTCACTTTGTCTT-CTACAAGAAG-------------------------------------------------------ACAGAGGAAAAAGTGG-------------------------TACACCAA---ATTGCTTTCGAACAATA---GCAATCCATCTTAA--TTATATTCATTTTAA------CCAAGTTGAAAGGTATTTAGGTGAA---GTCTTTTTCGAAAGGAAAAGGAATGCTGTTTTTATTTTTTGAAAGTAAGTTTTCAAAT---------AGGCCAT--------CATGGGTATGTGAATAGTGCGGATTTTT------------------AGCTATACAGCAGTCCTTTCCACATTTTGTGTTAAAGCTGTTTCTGTAAACATTAACATATTGACGAAATTTAAATACAATGGTAAACACTAATTTAAATGGAGAAAAGAAGAGCTATGTCCTTAG---ATACAGTTTGTAAGTAAC--TAAAAATATTTCTAGAATG----------------TTGGTACCTATAAAAATGGCATGAAGCAAAAGATGCAAGTAACCTCCCCATTCCACTTTCACACTGTGGTCAACTATCAAGTCAGTCAAAAGGATCACTGCTATGTTGCATCTAAAAACAAAAA------------------------------TAAACCTG--------TTAGCAGAATAT--------------------------------AACATACAATCTTT---------------------ATGTAGAGCTGCAAAGAAC-------------TTAAA---ATGCTTCTGAAC----------AGTATTCTCTCAAGTCTAG------------------TTACAA--------------ACAC------CCACAA------------ACA-------TGCATTAA--------GGGAAAATACA-TA--TGCTC-ACAGTGA---AGATGGAGAAACTCCAGTTC----------------------CCCAGAATAAAAAGTTTAAA--------------------AATCTTAGAAGTGCCAAA----TATGTAAAAC-CACAGAAAA-------------------TAATTGTACTATCTTAATA----TATAA--------TCTTTAAACTCACTAT-GTTTAAATTCCTGTACTTGTACAACAGAA-----ATTGAAAAG----------TATTGAGTTGCCA--------------------------TCAGCAAGCATTTA--ACAACTGTAAAAACAAT------------TACCTGTGCAGAGACATGCCCGGAGAAGTTGTCTCAGGCAAGTAATCCACTAAGGGTGACCAGCAACCTCCAGTGGGTGGAAAAGGGAGAGGCTCTCCTTGATTGTGCTCCATCACCTTCAGCCGCCAGTTTGAATACAGAGGCATTGAATCACCTA ......--.......:...x..........:....:.::...:.....x.......:.....:......:.....::....:.....x..............x.x.:...::.....::::.:......:.....:..:.::....:......x...........:.....x..:........:...........x.....x.x:..:------.:.:..:..::x....:-...:x.....:-.:.x.x.:.x.xx...:..:x...x.x:..x..:xxx---------.....:-....xx.x.:..:..-x.:.xx....:..x..:x::.xx..x.:...x.xx..x.:..xx..x..----...:x...:xx:.x.:::..xx.----------------------..:...-.x.....xxx:.x....x..:x:.:-------...x:.:x..xx...xxx........x.x..:.------------.:x...:..xx.::....x------------------------......x..xxxx:..xx...x.x...-----x.x....x...x:x:..:------..xx.:.....x--.....x...xxx::.::.x.x...-..x..:....-------------------------------------------------------.....:.:x.x::...-------------------------.x..x...---.x.x....:.::x....---:x..:.:....:..--..x:.....:.:.:.------....x::x.:..----...:..x..---.x..:..x.x.x..xx.x.-....x:.x::..x:.x.xx.:x.x..:x....x::x:.---------.......--------x..:..x...x.::..:.:x:x..x...------------------:..:.x...xx.x...::xxx.x.-------::.:..xx:.:x:x..:..x.x.:x...:--..x:x..:x....x.:..::.x.....-----------.:.:x.x.x..:.:.--....x.x.:---....x.:..x...:.x.:--.........xx.xx...x.----------------..:x.............x........x.:......x.:...:.:............:........:..:....:x..x.::..........................:..:...x:.xx..x..------------------------------.......:--------..:.:.x..x..--------------------------------..x......::.x.---------------------.x:..x.....x.:.:...-------------.....---...xxx.x....----------..x:...::.x..x..x:.------------------..x...--------------....------.....:------------...-------........--------.::.:...:..-..--.....-.:x....---x.x.:::x.:.x.:..:..:----------------------..:.xx...::..:x.:.x.--------------------::..::....:x.:...:----....:x.:..-.x.......-------------------....x:..:..x:..x...----..x..--------.:....:.:.:x:..x-:.:....:x.x.xx.::...::x:...x.-----..x:.:...----------.x:..x....:..--------------------------......:xx.:..:--:..xx.......:x...------------:.......x....::.xx..x..x..x.x:..:.......x.........:.:x...........:.......:x.....:..:..x..x...........:..:...........:.....:.....:..x.....x..x................ 6M2D200M6I17M1I11M1I37M9D6M1I15M1D49M4D23M22D6M1I25M7D33M12D19M24D27M5D18M6D12M2D24M1D10M55D16M25D8M3D17M3D14M2D15M6D12M4I9M3D19M1I38M9D7M8D28M18D24M7I29M2I27M11I15M2I9M3D18M2D19M16D124M30D8M8D12M32D14M21D19M13D5M3D12M10D19M18D6M14D4M6D6M12D3M7D8M8D11M1D2M2D5M1D7M3D20M22D20M20D18M4D10M1D9M19D19M4D5M8D16M1D29M5D9M10D13M26D14M2D17M12D157M 1011/1483 68.2% 1520/94230402 0.0% 608/1483 41.0% 22601943 NA +8656 chr4 + 190214555 48550569 48550568 48550732 164 TAAAAACATTTGGAATTTA-----TTACTTTTTTCTTCTTCATAAGATCCTCCAGAGCTGCTACTGTATCGGGATTCTAGTCTGTGATGTTGCCGATTCAAATGACTGTTTAGTCCACTGTAAATGTCCAGGTGCACATAGCTATGGGAATGATCACTGAA--GTTAGTCA chr4 - 94230402 25948084 25948083 25948254 68282149 68282148 68282319 171 TAGAAATATTTATAGATTAAAATATTACTTTTTTCCTCTTCATATGATCCCCCAGAGCTGCTGCTGTAGCGAGATTCCAGTCTGTGGTGCTGACGGTTTAAGTTACTGTTCAACCCACTGTAGATGTCTAGATGTGCATAACTGCAGGAACAAATAAAGAGACATTAGTCA ..:...:....:x.:x...-----...........:........x.....:...........:.....x..:.....:........:..:..x..:..:..:.x......:.::........:.....:..:..::....:..:::....::.x:.xx..:--:....... 19M5I137M2I8M 124/164 75.6% 171/94230402 0.0% 7/164 4.3% 22602485 NA +7366 chr4 + 190214555 48551483 48551482 48551596 114 GAAGTACTTACCTCTCTTCAATATTCTCTTTAATGGGCTTATTATCAGGATTGCCATCTGTGGGAGCTACCATTGTATTGCTACTGGAAGTAGTTCCTGT-AATCAAAGACAAAG chr4 - 94230402 25949708 25949707 25949822 68280581 68280580 68280695 115 GAGATACTTACTTCTCTTCAATGCTGTCTTTTATATGTTTACTGTCAGGGTTGCCATCTGTAGGAGCTACCATTGTATTGCTACTAGAAGTGGTACCTGTAAATTATGGACAAAG ..::.......:..........::.x.....x..:x.:...:.:.....:...........:.......................:.....:..x.....-...:.x:....... 100M1I14M 94/114 82.5% 115/94230402 0.0% 1/114 0.9% 22601775 NA +14373 chr4 + 190214555 48553205 48553204 48553398 194 AATTTCTCACCTGAGGTGACAGAAGGGATTTTATAGCTGGAAGTGATGCGATAATACGGGGGATTATCCATGTGAGTGACCCCTGAACTGACAGGATCGGTCAGCTGAAGCTCACTCACCAGCTCTTCTAGCAACTGCATTGTTTTATCTCTACCTAAATATACAATGACCTTCTTCACCTGTCACAAAAGAAA chr4 - 94230402 25950915 25950914 25951108 68279295 68279294 68279488 194 AAATTCTCACCTGAAGTGACAGAAGGGATTTTATAGCTGGAAGTAATGCGGTAGTATGGTGGATTATCCATATGGGTGACTCCTGAACTGACAGGATCTGTAAGCTGAAGTTCACTCACCAGCTCTTCCAGTAGTTGCATTGTTTTGTCTCTACCCAAATAAACAATAACTTTCTTTACCTGCCATCAAATAAA ..x...........:.............................:.....:..:..:..x...........:..:.....:.................x..x........:.................:..:.::...........:........:.....x.....:..:.....:.....:..:x...x... 194M 167/194 86.1% 194/94230402 0.0% 0/194 0.0% 22602290 NA +3214 chr4 + 190214555 48553644 48553643 48553731 88 CTTTACTTTAAAAAAAAAAAAAAAAAAAAACAAAAAAATACTTTTCTGTAAAAATTTCTCTTTTAATGGA-----AACACAGGTAATAACATC chr4 - 94230402 28462986 28462985 28463078 65767325 65767324 65767417 93 CTTTGCTTTAAAAAAAACAAAAACAAACAAAAAAAAAACACCTCTCTGTCTGCATTTGTGTTAACATCAGCCACTAACACAGGAAGTTACTTC ....:............x.....x...x..x.......:..:.:.....xx:x....x.x..xxx..x::-----........x.:.x..x.. 70M5I18M 64/88 72.7% 93/94230402 0.0% 5/88 5.7% 20090658 NA +9970 chr4 + 190214555 48556970 48556969 48557123 154 ATACATACGTAAGGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAATTATTTTCAGGTTTTTGGGCCAGCCATCTGCAAGTGTGGTCCACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTAGA chr4 - 94230402 25952821 25952820 25952974 68277429 68277428 68277582 154 ATACTCACATAAGGCAAAAGGCTGGGTTCACTGTTCACTCCACAGATACTGATCAGGAAGTGCAAAATTATTTTCAGATTCTTTGGCCAGCTGTCTGCCAAAGTTGTCCAGACATTTTCAATCTCAGACCAAGCCACTTCATCACCATACTGGA ....x:..:........:.....x.....:..:.....:.....:..:.......::....................:..:..x.......::.....x.:x..x.....x.....:..x.:...x.....:....x......:.......:.. 154M 124/154 80.5% 154/94230402 0.0% 0/154 0.0% 22604149 NA +18218 chr4 + 190214555 48557434 48557433 48557724 291 AATACAAAACTCATTTTACCTTTGCTGTCATATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTCTCCCCGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTTCATCTTCATCATGTCGCCTTGCTGTGGGGAGAGGTTTTAAGTCCACCAGCTCGATGTTGTTCATCCATGGTAGCAGGTAGTGCAGCATCACCTGCCGCCCAGCAGGGTGAGCTGTCTGGATTCTCTGGCTTATCTCTGAAATTGAAA chr4 - 94230402 25954063 25954062 25954353 68276050 68276049 68276340 291 AATACCAACTAGTTTTTACCTTTGCAGTCATATACATAAGGTTGTTCAGGACCATGGCTGTAGCCTGCGGTGATCCCCAGCCTTCTCCTCGTAGCCAGCGCCTACTGTTCACCATTATTTCTCTATCCTTCAAAGAATCTTCTTCATCTTCATCTTGCCGCCGAATGGTTGGCAAAGGTTTCAAGTCTACTAGCTCAATATTGTTCATCCATGGCAGCAGATAATGCAGCATCACCTGTCTCCCAGCTGGGTGAGCCGTTTGGATTCTCTGGCTTACTTCTGTAATTCAAA .....x..x:xxx............x...........x..:.......::.....x..x..:..:..:..x........x........:....:............:x.......x.x.....x:..:..:..:.....x..............x..:....xx::x..x..x.:......:.....:..:.....:..:..............:.....:..:..............:.x......x........:..:................::....x....x... 291M 234/291 80.4% 291/94230402 0.0% 0/291 0.0% 22603371 NA +12389 chr4 + 190214555 48561461 48561460 48561728 268 ATCATACCTGAGAATATGGCGAGAGTTAGCTCAGGATACGCCCTTGCTAGTTCCTCGGACAACTGATAATATGAAACAGAATAGAGATGTGGTAGAGGAGACAGCTGGCTGAGTACTCCATCTGTTCTCTGAACCTCCAATTTGTGAGCATAGCGAAACATCTTCGGTTCCAGAATCTATAGGAATGTGATTCCATCAACTTAGGTTAAGATTTTATGGGTTCTCTAAAGTTTAACTATAATTTTATAATTTTTAAAAAAACTCTTCT chr4 - 94230402 25955527 25955526 25955776 68274627 68274626 68274876 250 ACCATACCTGAGAAGATGGCAAGAGTTAGCTCAGGATAAGTCCTTGCCAATTCTTCTGACAGTTGATAGTATGACGCAGAATACAGATGTGGTAAAGGAGAAGGCTGACCCAAAACTCCATCCGTCCTCTGAACTTCCAGTTTGTGAGCATAACGGAACATCTTTGGTTCCAAGATCTA--------------CAACAGCAATGTTTAGAATTTGAAGCTCTGTACAAAGTTATATTGCAAGTCT----TCATAAAAAAAACACCTTT .:............x.....:.................x.:......:.:...:..x....::.....:.....x:.......x..........:......x:....:.:x.:x........:..:........:....:............:..:........:.......::.....--------------..x..:.xxx.x...::....x.x.xx:.x.x:......xx.:.::..x.:.----.:x.x........x.:.:. 179M14D52M4D19M 189/250 75.6% 250/94230402 0.0% 18/250 7.2% 22605934 NA +11065 chr4 + 190214555 48562847 48562846 48563038 192 AATCCTGAGTAAAAAAATATTTAAATTCACATG--TTTACAAACCTGTAAAAGTTGCATAGCAACTTCATAGATACTTCTAGAAGAATCAGCTGCTTTAAACAGTATCAGATTTAGAAGCATCACTGTGTCACATTGATAATCCCTAGGAATAAATTTTACATATTAAGTAAATAACAATGTTTAGAGGCTTTT chr4 - 94230402 25956856 25956855 25957049 68273354 68273353 68273547 194 AATTTTTAAAACAAAAACAATTGAATCAAAATGAGCTTACAAACCTGTAATAGTTGCATAGCAACTTCATAGATAGCCCTAGTAGAATCAGCTGCTTTAAACAGTATCAGATTTAGAAGGGTCACTGTATCACACTGGTAATCCCTAGGGAAAAATTGCAAACATGaaataaataacattaatttgattttttt ...::.x.:x.x.....:.x..:...:x.x...--:..............x........................x::....x....................................x:.......:.....:..:...........:.x.....x:.x.:..x..:.........x.:x..x..xx:.... 33M2I159M 154/192 80.2% 194/94230402 0.0% 2/192 1.0% 22605991 NA +21189 chr4 + 190214555 48563886 48563885 48565758 1873 AAGAAAAACTTTTCTTTAAGAAAACAGAAC---AAAATGAAAC-----AAAAAACCTGTATCTAAAGTACCTGTTCTGGAAAACATTAGCAATGGCTTTAAAGCAGCCGGCCGCCACCCTCCCGGAGCCCGTGTAGCAGCGGTCCACAGCCCAGTACATCAGGTTGCTCTGATCAGGGTTCAGCTCCAGTAACAACGTAACTGCTTCACAGCCCAGCTGGTGAACCTAGGT-------------------------------------------------AAAGG------TTGTGAAA-TTGCCCGAGAGAGAACGTTATATATTT---------TTTGTCTATTTCCCTATAGTTCTT---ACTAAAGTAATATAGTGCATATATTCATTGTAATTAATAGAAAAATTCCATCT--CCTTTTGTTCACCTCCCTCTCATTTTATTCAGCCAGCAGAAAAAACCACACAGATGAACTGAATTTGGCCTCTCGCTTTTTACG---CGAGCCTCTCTAGTATGATTTTGTCTTCC---AACAGAGCCCTGAAGGCAGTTAATGAATATGAATAGTGATTAGGTGCTTTCAGA-------------AAAATGAGTCATTAACCTCTCCAATTATTTTTATCAAGCTTT-ATTCTTGTTTTTGATAACCCAATAGAAAAAC-------TGTTCTGAGGGGAAAA----AATGTAAGTCCTAT-TTTAAATTGTGAAGTCTGTATATGTACAATATGAGAGTAAGGAAGGCAGAGTGTGGAGGGCAAGG------AGGAATGATTAAATGGAAAGTGG--TTAAAAAAACGAAATGAAACATAGCAAATAACATATTTTTCCCATGCAGCTCAA---TATGTTCTATGCTGGTATTTTATTTA-----TTGACTTA----------GAACCCTGTTGAGAGACACATACCACTGTATTAATCCTATAATATA-------AAAAGGGAAATGAAAA-----TTATTCAAATTAATGATA-CATAAGAATTGGAACGTTTTTACATTATGGGATCCTATTTAACTTTATATAATATGCTTTTTGCATATGATCCTAACCTATCTTATTTTTTTAAAAGACTTGTTTTTAGTGCAAC-------ATACATTAACTGCAAATAATACAATGACAACTTATTATGAACCTTTAAGGAAATTGTCATAATTACCTTTTTGTCCAGAGAATCCAAAATGTTATCCAACCATTTGTACAAATAGCCATCTGATGAAAGTCCTACATTATCTGCAACAGGGCCACAACACAGTACAGCAGACATAGCCTTCAAATAATAATATTAGAATTACATTT-AACAAATTTAAGAGGTTAAATGTTGGTTGCTTAATGAGAAGAGGCAAAATACTTATCTAGTCACAATACTTTAATCTTTTTTCTTTACAAATTA------------TTTTTTAAAACTGAGAAATTTATTATGAGTAAGTAAATA-TGATACCAAATTAGACATGGAGTTTGAACAGTACTGGAAGGGAAGATAAAAAGACCAAGAAAAAGTAATTAAGTAAGGG---AAAAAAGGCATTTCTTTCAAGTAATCCT------AAGTTCTTT------------AAGATAATGGTGA-TCAA------------ATTTGAGTAGATTCTGGAACTGTTTTTCATTGTATTTTATGTATTTAAATATAACTTATGGTATAAGTTT---TGAATATGGCAGAAAAACATTTTAATACTCTCAGATCCTCTTTTTAATACTAGTGACTGAGAGAC------TTAAAAATACTTAACTCTGCTCTTAAGAAAAAAGAAATCAGGTTTCTAAGT-------------AAATACCTTTAACGCACAGTATTGATGTCTATTAATTTGCATATTTCTATCACTGTATCTGTCCAAGGGCGTAAACATGATGCTAAAAGGACCTGCCCAGTGACTGAACAGCATAAATAGACTGTGACGAAGGCTCTGTTGAGGAAAAATACTTCTTCTCTGGTGCACTGTGAATAAAAAAAGATAGAAAACATTTATTTCCATTTCTTTTTGCTTTAACTTTTATACCAACAT chr4 - 94230402 25957175 25957174 25959121 68271282 68271281 68273228 1947 AGGAAAAAATGTTCTAAATGAAATTATGCTTGGAAAATGAAAGTTTTGAAAAATTCTGTA------GTACCTGTTTTGGAACACACTGGCTATGGCTTTAAAGCAGCCAGCTGCTACCCGCTTGGAACCTGTATAGCACCGGTCTACGGCCCAGTACATGAGGTTACTCTGGTCAGGGTTGAGTTCCAAGAGCAGCGTAACTGCCTCGCAGCCCAGCTGGTGAACCTGCATTCAGAAATGAACCAATTAaaaataaaataaaataaaataaaaaaataaaaAAGGGCCAACTTATAAAAATGGCATAAAAGAGGGAAATAGATATTTAATCCAAAACATCTGTAATGCACAAAAATTATTCCAGCTAAAAATA-AGAGTCCACA-----GTTAAAAATAACAGATAA--TCTATCAAACCGTTTAATGTCC--------AAACTGTACACACAGTA-AAAGAAGTAAACAACTAGA-TAGCTCTAACCTTCCTTTTTCTCAGTTCCAAGCCCATATTGTGCTATTTACTCTTTTCTGAACATGGATCTGAAGGCATCAGATACA---GAAAAGCGCTTAAATATAGACAGGTATTCTACAGTGGGATACAAGGGACCAATCCATCCAGAGGCTTGTATAATCCCCTGAATCT----------AGCCCACTGGAGCAGCAATTTTATGCTATCACAGTATTAGTGCAATGGAGGCCCTATCTTTTAGATGTAAAGCTGGCTTTTCTA---------AGTAG---ATGTAAAGCTTGGTCTTCAGAATTCCATAGGACCCCATCAATGGACACTGGAGTCTCACAGACTT-------CATGTTAAAAATCTTGTCTCCTTTATGTTTCTGAAGCTTGTACTTATTACTACAACTTTATCTAGCTGATTAGTTTATAAATTATAAGAAACCTGTTTCAG--CCCTTTCCTCT---TTAGTTCTGCTTTGTCTGTGCTCAGAACGTGCCTGGTGACTGCCTTCCTCAACTTGGTGATAGTGTGTCAA---GGACAAGGCAAAAATATGCACTCCTAA---------------GAGCTTTAGGCATA-------AGCCACTCT----------AAAGCCCTCGGGTCAATGTGACCACAATAATTCATGAA-TGCCTATGTTGAAAGCACTGATAGTTGCAAACCAATATTTACATTGCCTGCATTACCTTCTTATCCTGTGAATCCAGAATATTATCCAGCCATTTGTATAAATAGCCATCAGATGAGAGCCCAACATTATCTGCCACAGGGCCACAACACAGTACAGCAGACATAGCCTTTAGAAAGTAA----AACAGTACATTTTAATAGCTCAGATACAGCAGATGT--GTTTCT--ATCAAACCCATTAAAATCC---------CAAAAAACTACAGTCTATTCT---GACAGGTGAGAAAGACTAAGGCTAACAAAAACCGAATAACATCTTGT---TAAAGAAATACTAAAACCAAATCAGGT---TACTCTGAACTCTC----AAGTAAAAGTGAAAAG-----------TGACTTATGCAGGAGTTTATATGATGTTTTTGTTACTAATGAACTTTACATGAAAGTCTTTCTCCTTAGCTGAAAAGTCATGGGAAGTCAACATTTACTAGTAATTTTAGGTAATTCTCCTACTAAGTGCAACGGTTTACAGTATGCAAAAAAACAGATTATCAAAAATGAGCAAATAGCTAGAACAGAGAAATAACAAAGTCATAAATGACGGGGATATGAAAACCATCTCCCAAAAGCCGAGGTGTTAAATATACATTAGCAAAATC-----AACATGGGAATTTATTTTCAAAGCTCAAAAAGGATTGAAATACCTTTAATGCACAGTATTGGTGTCTGTTGATTTGCATGTTCCTATCACTGTATCTATCCAGGGGAGTAAACATGATACTAAAAGGACCTGCCCAATGACTGAACAACATAAATAGACTGTGGCGGAGACTTTGCTGTGGAAAGACACTTCTTCTCTGGTGGACTGT-AAGAAAAGAAAATAAA--------GTTAGAAGTACTTTTTGTATCACTTTTTAAAATAATGT .:......x.x....xx.x....x:.x:x:---.........x-----.....x:.....------.........:.....x...:.:..x.................:..:..:....x.::...:..:..:.....x.....:..:...........x.....:.....:........x..:....:x.:..:.........:..:...................:x:.-------------------------------------------------.....------..:.:...-.x..x::.:....::x:x..x......---------:x.x.x..x.x.x.x.x.:..x..---:.....:xx.-.x...x..:.-----:..:x..x...:...x..--..:...x--..x...:x.xx..--------.xx:.:.x..xx...:.-...:..x:.x...:x.::.-.::x.:.::...::.x:...:.xx.---.:....:x.x.x..::x....xx....::---....x:.x:.........x:x:..:x.---...x..:.x...::.::xxx...:-------------:.x.::..xx.::..:.:x....:xx::..x...x.xx.::.-.x...----------.:....x.:..:x.:.-------..:.x.x.x:.x.xx.----....x.:.:.....-...x.:x...:...::x.:x.x.x..---------....:---.x.:.:..:x...xxxx..:::------....x:xxx.x......x.x...--.:xx.x.:..xx-------...:x:...x.x.x.:.:.:::::...:xx..x..---.:.::.:xx.:..:xx.:.....:..-----..:::...----------...x......xx::--.x.x.x..x..---...:.:..::xx.:.x-------.:..x.x:xx..:x:.-----..x:....x..::.....-::.:xx..---.:..:xxx:x.x.x....x:x.....x---------------:x.....xx.....-------.:..xx...----------....x.:.xxxx.:.:..::..-------..x...x..-...xx..:x.:x..xx..x:x.x:..:::....xx..xxx.x....:.xxx........:..:...x.x.......:...:.......:.........:...........x.....:..:..x...........x...................................:.:.x.:...----.:x.x.......-..:.:x.:x:.x.x:x:.:....--...x..--..x.:.xxx:x:.....x.---------..x..x...x:.:...x..:.---x...::.x.------------:.xx:x.....:..:x..:x.x..:.---...:x.....-.:.x.......:..::---x.x.:.....xx.x----...x:..::.:.....-----------xx.x...x.:.:.:.---.x.x:.x.:x...x..x.x.:.:.x.:.------..:x.....------------..::.x....x:.-....------------....x..xx:.....xxx...:xx.x:x.:x..x.x:x:.:.::xx...x.:.:x....x:x.x.x.xx:---.::x..x::....:...:.x:xx.:.xx.xxxx..:xxxxx.x.x..x..:.x:xx.::.:..x.------.....x....x.x.x:xx:x..-----..x.x:.:...:x:x....x...:-------------............:...........:.....:..:........:..:..............:....:...x...........:.................:..........:...............:..:..:..:..:..x.....:.:...............x.....-..x....:..:...:.--------:..xxx.x.x.......:x.:.x:.....x.x:..::. 30M3I10M5I12M6D165M49I5M6I8M1I27M9I24M3I10M1D10M5D18M2D7M2I13M8D17M1D19M1D25M3I29M3I27M3D24M13I42M1I5M10D16M7I16M4I14M1I26M9D5M3D22M6I23M2I12M7D35M3I26M5I8M10I14M2D11M3D16M7I16M5I18M1I8M3D27M15D14M7D9M10D22M7I9M1D180M4D12M1I23M2D6M2D19M9D21M3D9M12I26M3D10M1I16M3D14M4D16M11D15M3I28M6I9M12I13M1I4M12I70M3I65M6I22M5D24M13I171M1D16M8D38M 1120/1721 65.1% 1947/94230402 0.0% 378/1721 22.0% 22606711 NA +14310 chr4 + 190214555 48567244 48567243 48567427 184 ATACCTGGAACATTCTGAATAATATTCGCCACTAAGGCACTAAAATGGCATCGTATATCCTTCAGTGTGTCAGAGTCTTTTTCATTTTCTGCTTCCAGGAGTTGTCTAGTTAAATCTACATATTCCAATAAAGTGTTGTTGAGAAAATGTGTTTCATTATCAAGGCCACCACTTGCACTGAAAA chr4 - 94230402 25959493 25959492 25959676 68270727 68270726 68270910 184 ATACCTGGAACATTTTGAATGATATTTGCCACTAAGGCACTAAAATGGCATCGGATATCTTTCAATGTATCAGAATCCTTTTCATTTTCTGCTTCTAGGAGTTGTCTTGTGAGATCAACATACTCAAGTAAAGTGTTGTTGAGGGAATGTGTTTCATTATCAAGGCCACCACTTGCACTTAAAA ..............:.....:.....:..........................x.....:....:...:.....:..:.................:...........x..x.:...x.....:..x.:...............::..................................x.... 184M 164/184 89.1% 184/94230402 0.0% 0/184 0.0% 22607751 NA +8635 chr4 + 190214555 48570825 48570824 48570940 116 ACCTGTGACTAATGACACCAGCATCTGCCAGCAGTTCAAATATTCGTACCAGTTGTACTCGTAAAATGTCTCGACGCCTGCGCCGTTTCATATTCTATTCCAAAGATACAAACACA chr4 - 94230402 25960029 25960028 25960143 68270260 68270259 68270374 115 ACCTGTGACTAATGACACCAGCATCTGCCAACAGTTCAAATATTCGTACTAGTTGTACACGTAAAATATCCCGACGCCTGCGCCGTTTCATGTTCTGCTCAACAGAGG-AAACACA ..............................:..................:........x........:..:....................:....::..x.x...x:-....... 108M1D7M 103/115 89.6% 115/94230402 0.0% 1/115 0.9% 22610796 NA +5830 chr4 + 190214555 48573182 48573181 48573254 73 TCACCTCTGGCCTTCTTTCGAGTGCTTCTTTAATTATGGGATGTAATTCCTCTATTAGTTCCCTGGAAGAAAA chr4 - 94230402 25961078 25961077 25961150 68269253 68269252 68269325 73 TTACCTCTGGCCTTCTTTCAAGTGCTTCCTTAATTATAGGATGTAATTCCTCTATTAGTTCCCTGaattaaaa .:.................:........:........:...........................:.xx.... 73M 66/73 90.4% 73/94230402 0.0% 0/73 0.0% 22612104 NA +11633 chr4 + 190214555 48575111 48575110 48575254 144 AGTTACCTAAAAGCTCCTGGGTTGGTCCTGCCAAGACCTAGAACAAGGGATTCTGTGATTTCCATGCTCTCAGAACGCATCATTGGAACTATGTGCTTAAACAAGGATGAAGGGGATGGGATGCCAATAATCTGGAAAAAAAAT chr4 - 94230402 25962510 25962509 25962653 68267750 68267749 68267893 144 AATTACCTAAAAGCTCCTGGGTTGGTCCTGCCAAGTCCCAGCACAAGGGATTCTGTAATTTCCATGCTCTCAGAGCGCATCATTGGAACTATGTGTTTAAACAAGGAAGAAGGGGATGGAATGCCAATGATCTAAGAAGAAAAT .:.................................x..:..x..............:.................:....................:...........x...........:........:....:::..:..... 144M 130/144 90.3% 144/94230402 0.0% 0/144 0.0% 22612601 NA +15026 chr4 + 190214555 48576015 48576014 48576243 229 ATCTGAGAAACTTACTTTAGAATCAATGCTATAGCCGCTATCTGGGGTAGACGCCAGCGTCTCAGGAGGAGAACATCTCACAGAACCTGCAGATGTGGAAGA---TGACGATGTTGCTGCACTGCAGCAAAGGATCAGATAGTTTCTCCACAGGCCAATGTATGAGTCACTGCTTGTGGTGGTATTTACTTTCTTAGCATTGATGGGGCTACTAAGGAAAAAAAAAGAAAAA chr4 - 94230402 25964027 25964026 25964258 68266145 68266144 68266376 232 ATTGGAAGAACCTACTCTTGAATCAATGCTATAACCACTGTCAGGGGTAGACGCCAGCGTCTCAGGAGGGGAACATCTCACAGAGCCAGTGGAAGTAGAGGAGCTTGAAGACGATGCTGCGCTGCAGCAAAGGATCAGGTAGTTTCTCCAGAGCCCAATGTAGGAGTCACTGCTTGTAGTTGTATTCACTTTCTTTGCATTGATAGGGCTGCTATTTAAAGAAGAAAAAAAA ..:x..::...:....:.x..............:..:..:..x..........................:..............:..x.::..x..:..:..---...x..:.x......:.................:...........x..x........x..............:..x.....:........x........:.....:...xxx...:..:..:..... 102M3I127M 190/229 83.0% 232/94230402 0.0% 3/229 1.3% 22611988 NA +20240 chr4 + 190214555 48578960 48578959 48579260 301 GAAAATAACTTACTTTATATCGACCTGAGGGGACAACAACTGAAGTCTTGTGTATGCAAACATCCAAGCATAGCTCACAGCTGTAGAGCAGTGTTTAGGAAGATTTTCTTGCTTTAAAAAACTGGAGAGACTTATAATCCATGGGTCTTGGCCTTGGGTCACATGTGCAAATATCCATATATGTGATGGACTAATCACATCAAACTGGTGGCTAATAGGAGAAGAGTTCCATTCTGCTAAAGTTTGTAAATCTATCGAGCTAGGGCAATAGAGCAAAGTAGTCTATATGGAGAGGAAAAAA chr4 - 94230402 25964639 25964638 25964939 68265464 68265463 68265764 301 GAAATGAGCTTACTTTATATCCACTTGTGGAGACAGCATCTGGAGTCTGGTATAAGCAAACATCCAAGCATAGCTTACAGCTGTTGGGCAGTGTTTTGGAAGATTTTCCTGCTTCATAAAACTTGAAAGGCTTATAATCCACGGATCTTGGCCTTGAGTCACATGTGCAAATATCCATATATGTGATGGACTGACCACATCAAACTGGTGGCTGATTGGAGAGGAACTCCAGTCAGCCAAAGTCTGTAAATCTACTGAACTGGGACAGTATAGTAAAGTAGTCTGTATGCATTAAAAACAA ....xx.:.............x..:..x..:....:..x...:.....x..:..x....................:........x.:.........x...........:.....:.x......x..:..:...........:..:...........:...................................:.:..................:..x.....:..::....x..x..:.....:..........::..:..:..:..:..x..:..........:....x.xx::...x.. 301M 249/301 82.7% 301/94230402 0.0% 0/301 0.0% 22614321 NA +6950 chr4 + 190214555 48580842 48580841 48580963 122 TAGAATGAAGTCACTATAGTTACCTGATCAGCCCCAGTGAGATGTATGAAGCTCTCAAGAATGGATGGGCTTAGCCTGTCCATCACATCTATGGCTAATTCATCATCACCCTGTAAAAAAGA chr4 - 94230402 25965798 25965797 25965916 68264487 68264486 68264605 119 TAAGATAAAATCTCTCC---TACCTGATCAGCACCAGTGAGATGTATGAAACTCTCCAGGATAGAAGCACTTTGTCTGTCCATTACATCTATAGCCAATTCATCATCACTCTAAAAAAACGA ..::..:..:..x..x:---............x.................:.....x..:..:..x.x:...x.:........:........:..:.............:..:x.....x.. 17M3D102M 95/119 79.8% 119/94230402 0.0% 3/119 2.5% 22615044 NA +23376 chr4 + 190214555 48581382 48581381 48582760 1379 CTTTCAATAGATAACTGAATGAA---ATACCTAAATCTTACCTTAGGTATTTCCAGAAGTGCAAATAAAGCCCGTATTTCTCTAAGGACACTGACGGCTAGTCTCCTAGTGGCAGGTCGACTGCTACAGAGAATGACAAGCGCAAAGCCTTCAACCACATGGAATACATTGGAATATGGGCTCCTTTCCAGAGGAGGGGGATGAGAAGCTCCATTAGCTACACCATGCTTGAAAAA-----CAGAAGTTAAAAACAAAATATAAAAATATATGCACAGACATTTCCGAAAAACAGTTAATAAAAAATAAAGCAAATCATAGTGATTATGACTACCGGTCTGCCTCAGCTCAAGCAATGTAAATCGCATGTATTTTATAAAAATGGAATAGTGTGCACAGTGAAAACATTTCACTGGCAGTCTAAATATGAATTCTGTACCTAACTTCTACCATTCTCTGACTATTTTGTAACCTTGGAACTGACAGTTGCTCTTCATCTGATTTCT-ATGTGGAAAATGAGGGGATTGTAGTGTATCTTTCACACTCAGAGTGTGGACCAGCAGCCTGGCAATACCTGAGAGCTTCTAAGA--AACTCCTGAAACTCTTTCTTAGGGCCCTGTTGATTTGCATGCTCATTAAAGGTTGAGA---------AGCTAGGGTGGCTTCAATGGCTCGGGTCTAAAATTTCAAGGTTC----------TATGATTTACACATTATCATAAATCAATGATTTGAGCATCTTTTATGGTTAAGGAGCACAGTTACTGTCTATGTGAAACAGGGACTGGTGACATGGATAAAACAATCAAATAACCCAAATGGAAGACTACCAAAAATTTATTGTACTGGCTTTAAATATATTGGAAACAACCTAAAAGTGAGCTGGAATTATCTCTAATTTCTATGCTCATTAAAAACCCAAAGAAGAAGATTAGAAAAGTTAGACACATAAACACTATATATTCACTACAGGAACTATGGGAAAGTTCAGTTTAAGGGATTAGGAACACATTGAGAGTGAATAGAACTAATAATACTTTTAGTGTTTGATAAAGTAAATCTGTATTAAAACCATTATTGGTCATTTAGCACTGACCACATACAAAAGGACAATAGAAAAGAATCTGGTACCTGAGTGTCCTGGTTTTTATTATGCATTTGGGCTGCTTGTTTCCACTGATTTATTAATTGTACCAACATCTTTACGGCATTATCAAGAAGTGTGGGATGGACATCAGTCACTTCACGAACAATAAAATAAACAAATCCTGAAAGAACATCCTCCCGCCAATCTGGAAAATCAAGCATTAGTGCCTGCAGAGTATTGAAAGCCAGAGCACGCAGTTCTTCATCCATATGAATTGTGAGCCTACCAAGAACAAAATTCCATTAGCA chr4 - 94230402 25965969 25965968 25967068 68263335 68263334 68264434 1100 CTTTCATTAAGCATTTACATCAATGGATAAACAACTCTTACCTTAGAAATTTCTAGAAGTGTGAACAAGGCCCTTATTTCTCTAAGCACGCTGACTGCTAATCTTCTTGTTGCAGGCCTTGTGCTGCAAAGAATGACCAAAGCAAAGCCTTCCACCACATGAAATACATTGGAATAAAGGGTCCTCTCCAGAGGAAGGGTATGGGCAGCCCCACTGGAGACACCACGCTAAGAAAAAACCACAGAAGTTAAACAAATGAAGGAAAAA-------GTAAACACCATCGAATTACAGT------------------------GTCATTATTAGTGATGACAGAATTAATCATAAGATATTTAAGTCTTTTCTACTTGTCATATTTTAAATTATGCAAATGG------CATGGCATCAGC-----------------------TAGCTTGTATTTTTTTTT------TTTTTACCACAGGAA-----AGTCCTTCTTATTTTAATTCCTCACGTAAGTGATGCAATGAGTGCA-----------AAATTAAAAAAGAGTAAATGACACTCTCTCATATTTAATATTGTATAAAATTATTTCTTGGAACTCTT----ATACCTCTTTT---CTATTTGTTAGTGGAAAGTGGTGCTTTTTTGCCAGCTCTGCTGTTTAAAACTGCTC---TTTAATATTTCCAATTCCGCATGTTGAATTTGATGTAAAGA--AACATGTGGCAATTAATCAG----------TGTTTAGGGAGTAC--------TTAATATTAAATGAATTTTGGGGGAAAAAATAAAATAAT-----------------------------------------AGCACTAAATGTCTTCAGCACTGTAAGAAAATAAACTG-----------AATTTTTAT-TACTTTAATAA----AAAAAGCATACTAACAGA---------------ACTGTATATAGATTACA--------------------------------------------------------------------TTATGCTTCGATATCAAAGGATTGTATTTAA--------------------------------------------------------GATACCTGAGAATCTTGGGTTTTATTATGCATTTGGGCTGCTTGTTTCCACTGATTTATGAGCTGCACTAACATCTTTACTGCATTGTCAAGAAGCGTTGGGTGGATGTCAGTCACTTCACGCACAATAAAGTATACAAATCCTGAAAGAACATCTTCTCGCCAATCTGGAAAATCAAGCATTAATGCTTGGAGGGTATTGAAAGCCAAGGCACGAAGTTCTTCATCCATATGAATTGTCAGCCTGTTTAGAA-AAAATACCAGTATCA ......x..:::.x:.:x..x..---...xx:..x...........:x.....:.......::..:..:....x............x..:.....x....:...:..x..x.....:.xxx....:..:........x.:x...........x........:..............x:..x....:.........:...x...:.x...:...:.:.xx......:...x::....-----...........x.x.x:.x:x.....-------::.:...::x:....xx.....------------------------..x.....x.x.:x:.::xx:x:.x.x.x:...xx..x...:..x:x.x..:..xx:.x.xx.x:...x:..::x.::.------...xx..:::..-----------------------..:...x..::x..:.:.------...x..x.x:x....-----...:x:....xx.:.:...:..-.:..:::x:...x::x..x..:.-----------.x.:.x.:.:x.x.x.xxx.xx:.::xx:x...::.:.x.x:x.x...:.--.x:..:..:.......----.x:x.:..x..---:.::x..:.x:.x:..:..x.x.x---------....xx.x..x:.xx..:x....---.:...x.....x.:x.:.----------.x....x..x.x.--.x...:x:x....x.x.:::----------..x...:....:..--------.:x..:.x...::::xx:...x.:x.x::......:...-----------------------------------------:..x:.....:.x..x::x..x::xx:...:.:.:...-----------.....:...-:x.x....x..----..:...x.x.:..:x.:.---------------...:.....xx.:....--------------------------------------------------------------------...xxx..:....xx:x.::x:......x..--------------------------------------------------------.:........x:..:...x........................................x.::..:..:...........x.....:........:..x..:....::..............x........:..x....................:..:.........................:...:..x..:.............::.....x.......................x.....:::x....-.....x...x..x.. 23M3I210M5I26M7D22M24D79M6D12M23D18M6D15M5D22M1I23M11D50M2I16M4D11M3D24M9I23M3D18M10I13M2D20M10D14M8D39M41D38M11D9M1D11M4D18M15D17M68D31M56D253M1D15M 735/1070 68.7% 1100/94230402 0.0% 339/1070 31.7% 22615413 NA +9142 chr4 + 190214555 48586611 48586610 48586736 126 TCTCATTTACCTTGCTAACAATTCAATCAGGTCAGTTCTGCTCATACCGTCAGGAATCAACCTTGGAATCGCAGCAATACAAGTTCTAAACAAATCAATCTTGGGTTTTCTTTCCCCCCTGAAAAA chr4 - 94230402 25967956 25967955 25968081 68262322 68262321 68262447 126 TTTCACTTACCTTGCAAGCAATTCAATGAGGTCAGTCCTGCTCATACCATCTGGAATCAATCTTGGAATAGCAGCAATACAAGTTCTGAATAAATCTATCTTAGGTTTTCTTTCACCCCTACAAAA .:...:.........x.:.........x........:...........:..x........:........x.................:..:.....x.....:...........x.....:x.... 126M 109/126 86.5% 126/94230402 0.0% 0/126 0.0% 22618655 NA +18353 chr4 + 190214555 48589731 48589730 48590874 1144 AATTTACTACATACGTAATCATGTCTTCAGGCTCCTTATTAGACATCTGCACACTGGTCATACACATTGGTCTCCCAACTTCTTTGTCCAAATGTCTGAGGATGCTATCTAATGCTTTTCTTACTTGAGGATAGTAAACTGACATTCCTAGGGGAAAAAACTTCA---CAGTTATAAAATATCTGAAATTAGATAAAGAATACTTACTTTCTGTAATAAAAGCCTATTAATCTTTAAATGATTAGCTTATTGTTGCCACAAAAGGGGTTTCAACTGTGACATATTCTTCTCCCTGATGATCAGCTTCAGTATATTGGACTAATTGGAGAAATTATGT---GAAAATTATGCAGAGGACTAAAACTAAGTTGAAGAAAGGACAGAATGCAGTGAATAGGA-----TCCTGTGA---TAAAGATTTAACT---GGAAAACTCTTAACATGAAGACTCATGACTATTATCAAAAAAACGTATTCACTGTGGGCTGAGCATGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGAGTGAAATCACTTGGGGTCAGGAGTTCAAGACCAGCCTGGTCAAGGTGGCAAAA----------CCCCATCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGATGCACGCCTGTGGTCCCAGCGACTTGGGAGGCTGAGGCATGAAAATCACT----TGAACTCAGGAGGTAGAGCTTACAGTCAGCCAAGACTGCACCATGCCCTCCAGCCTGGGCAACAAAGTGAGACTCTGTCTCAAAAACAAAAACAAAAACAAAAAACAAAAAAAACCCAGAAGTATTC--------ATTTTGTATG-----GCTGTATATACTAGAAAAACCATATTAGGCAAATTTATATACATTT---------TATATTTGATCAGACTTTTATAAAAGAATATGAAAC---------TGTATTACAAAGCAACATTTAATTTCAATTAAACTA------ACCTATGACTTTTGCTTCTTCATCTGTCAAGGTTTTATTGAGAAATATTTTCTTTACACGAAGAGTATTTCCTGAGGGAAGAATAACTCCTGTTGTTGGCATGGGTGGTTCACCATCTTTCTGCTGCAAACTGTCTGCTATTACAAGGAAGACTCTGAGACCTATGTTCATTCTCTTCAAAGGAAAAAAATGCAAAAGGAAGAGATGAGTATCATAAA chr4 - 94230402 25968229 25968228 25969272 68261131 68261130 68262174 1044 AATGTTATACATACGTAATCATGTCCTCAGGTTCTTTATTGGACATCTGCACGCTAGTCATGCACATGGGCCTTCCAACTTCTTTGTCCAAATGCCTAAGAATGCTGTCCAGAGCTTTTCTGACTTGAGGATAGTAGATTGACATTCCTGAAAATGAGAGTTCCAACCTCGTCTTTCAATATTGCACATTCT--------CACTTGTTTTTCACATT-----CTTATTAAAATATA-----------------TACCACA-------TTCAGTTTAGGACAAATTT--------------------------------CTTATTGTACAAAGCCTGTCATGAAACTCATTTTAAGAGTCAAAAAGAA-----AAGAAGCATATCAAGCAAGCAGCAGGAGGTAATTTTATGAAAGTAGAAGTTTCCTTCAGGGAAGAACATAAACA-GAGAAGTAATAATTAGTTGC-----------TTTTCTCATTTCTGAGCATTTTAGTTCTAGCTTGAGATTGT----CTTTTAGAGAC-------AACTATTTCATCTG----CAGAAGATCCA-------CCAAACAAAGGGATAAAAAAATTTCTCACTCCAACTCAGCTGTATTTTGGAACATT---CTAGAGTGG--------------------ATCAACGGAACAAAAATTGCCGTGCTAATTACTAAACTAATCTCAGTATTTTGTGTGCTAATTCAGC----AGTGCAAAATAGTTTTCAGAAAAAGCCACG------GATCCGGTCTTGGACAC-----------CAGAAGTTCAATACTGTCTAGAGCTTCTCTCTAAAGAATCTTGTTTAAACATGCTGC---CACTACATAAATTCTAC-ATAAAAATTGAAATAAATACAGAAATAAAGATACACAAACATACTATTTGAGAATAACTGAGAACATACATGTACGTATTGGAATGCAA-----AATTCCAAA-AGACTAGTACATACCTATAACTTTTGCTTCCTCGTCTGTCAGTGTTTTATTAAGAAAAATTTTCTTCACACGCAGAGTATTTCCTGAGGGAAGGACAACTCCTGTTGTTGGCATTGGTGGTTCACCATCTTTCTGCTGTAAACTATCTGCTATGACAAGGAAGACTCTGAGGCCTATATTCATCCTCTTCAAAAGCAA------CAAAGAGAAGAAAAAAGAAGCAGAAA ...x.xx..................:.....:..:.....:...........:..:.....:.....x..:..:....................:..:..:.....:..:.:x........x..............:.:..........:::::x:.:.::.:..---:x..:x.xx.....:xx.x...xx--------:....::...::::.x.-----.:......xx.x..-----------------.:.....-------..:x:x:.:x....x...:--------------------------------..x....x.x...x:x...---....x.:..x:x:..::::....xx..-----.::...x.:.xx.x...:xx.::....-----.::.:...---..:.::...xx:.---....:.x:x.x....-..::.x.x..:.:..x.xx.-----------..:x..xxxxx........xx.:.:..xx.::..x:..:x:----....x:...:.-------.::x.xx...::..----...:..x..x.-------.:::x...:.x.::....----------.:...x...x:..:x.xx.xx:..x...---.x:.x....--------------------.x.:..xx::x.::xxxx.x.:..xx...:...----.:.x.....x.xx.x.x.:x:xx.x.....----.x....xx..:x::.:...xxx::..x..:------..::.x....:::.x..-----------..:..:x:x..x.xx::.:...:x.x:..--------..:....x.:-----....:---:....x.x...::x..:-.x:x.....x.x...x..x:---------x...:x::.x..x...x..xx.:..x..:xx::...---------:.....:x..x....-----....:...x-.:....------......:...........:..:.......:x........:.....x........:.....x....................:.:..................x.......................:.....:........x.................:.....:.....:.........:.x..------....::.....:.x:..x.x..x... 165M3I24M8D17M5D14M17D7M7D19M32D19M3I27M5D27M5I8M3I13M3I15M1D20M11D41M4D11M7D14M4D11M7D18M10I28M3D9M20D33M4I30M4D30M6D17M11D29M8I10M5I5M3D17M1D20M9I36M9I15M5D9M1D6M6I186M6D26M 660/976 67.6% 1044/94230402 0.0% 236/976 24.2% 22621502 NA +3064 chr4 + 190214555 48592071 48592070 48592123 53 AAATAAAGCTCTTATATATATATATATATATATATATATATATATTTTATCTA chr4 - 94230402 92735336 92735335 92735388 1495015 1495014 1495067 53 AAAGTAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTA ...xx..x.....::....x.....:...:..:.:.............x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -44143265 -50087137 +8479 chr4 + 190214555 48593921 48593920 48594040 120 TTTTTTTACCTCTGGATTAATGGTGAAAGTTTTAGTAGATTTTCCAACACTGAGAAGATCAAATATTATTTCTTTCATTGCAAAATCCAAGCGTTCCT-TAAAAAAAAAAAAATCCTTATA chr4 - 94230402 25969890 25969889 25970010 68260393 68260392 68260513 121 TTGTTTTACCTCTGGATTAATTGTGAAGGTTTTGGGTGATTTTCCAACACTAAGAAGATCAAATATTATTTCTTTCATTGCAAAATCCAAGCGTTCCTATGAAGGAAAAAAAGTTTATACA ..x..................x.....:.....:.xx..............:..............................................-.:..::.......:.::x..:. 98M1I22M 105/120 87.5% 121/94230402 0.0% 1/120 0.8% 22624031 NA +9490 chr4 + 190214555 48595585 48595584 48595713 129 CTCACCTGAGCAATGAACTGAATAATCTTCACAAATATATTGAGAGGTGTGTCACGAGGAACCACACTTCGTGAGCCTTTTGGAAAAAGTGCTGACACTATGCTCATAAGACGACTACAGGGAAAAAGA chr4 - 94230402 25971647 25971646 25971775 68258628 68258627 68258756 129 CTTACCTGAGCAATGAACTGAATAATCTTCACAAATATATTCAGAGGTGTGTCTCGTGGGACCACACTACGTGATCCTTTTGGAAAAAGTGCTGATACAATGCTCATGAGACGACTACGAGAATTGAGA ..:......................................x...........x..x..:........x.....x....................:..x........:..........::.:.xx:... 129M 113/129 87.6% 129/94230402 0.0% 0/129 0.0% 22623938 NA +10324 chr4 + 190214555 48595850 48595849 48596044 195 AAAAACAAGAATTTATTTTTAATGCACTTTAAAGCAAAGATACTCACCTTTGAGTTACAGTGTTGCTTTCACATTTTATTCTAATTACATAAACCCACAATAATCTATACAAAGATTCCAGTGCAACTCGAGACATTTTCGGATCTTTATTCTGTTTTAAAACAAAAG-AGAATAAACTTATTATAATACTTGCAA chr4 - 94230402 25972342 25972341 25972528 68257875 68257874 68258061 187 AAAAAAAAAAACCAACTTAGAATCCCTTGCACAATGAA----CTTACCTTTGAGTTACAGTGTTGCTTTCACATTTTATTCTAATAACATAAACCCACAACAACCTATACAAAGATTCCAGTGCAACTCGGGACATTTTAGGATCTTTATTCTG---TAAAATAGAAGAAAAATACAGTTACTGC--TGCCTGCAA .....x..:..::x.:..xx...x.x:.x:.x.:::..----..:........................................x..............:..:..........................:........x..............---.....:.:...-.:....x.x...:.::--.:.:..... 38M4D112M3D11M1I16M2D9M 153/186 82.3% 187/94230402 0.0% 10/186 5.4% 22623508 NA +12765 chr4 + 190214555 48598758 48598757 48599021 264 AAAGGAAAAACAAATGCCACGCTTAAAGGAAATAAAGCAGTATTTTACTTTGTAATGTCGACACA---ACTCACCTGGAGTGTTTCTATTTGTTTTCTGATACTGTTGTTAGATGGCATCTAAATAAAGCAATGTGAGACAGCAAA----CATAAACATGAGA---TGCAGCACATGCATGTTAGATGAAAATAAGCAC-AAAACA--AGACAGCTCTTCACCAAGGTCTCTATTTAGAAGAAATTTGAAATGTCCAAGACAGTGGCCAGAAACACT chr4 - 94230402 25974911 25974910 25975185 68255218 68255217 68255492 275 AAAAGAGTACAAAATACATTATTTACACGAGACAAAGCAACATTTCACTGAGTTGTAACAACATATTAACTCACCTGCAGTGTTTCTATTTGTTTTCTGATACTGTTGTTAGATGGCATCTAAATAAAGCAATGTGAGACAGCAAAACATAACAAACATGAGAATGGGAGGCACATGCATGTTAGATGAAAAAAAGCACAAAAACAACAGATAGCTGTATACTAAGGACTCTATTCAGTAGAAATACTGTTTTTTC--TACAGTGGCAAAAAACATT ...:..:x.xx....:.xx:::...x.x..:.:......::....:...xx..x:.:x.:...:.---.........x....................................................................----x.:..........---x.x:......................x......-......--...:....x.x:..:....x.......:..x......x:x:xx.x.:.--x........x.:.....:. 65M3I78M4I13M3I33M1I6M2I48M2D19M 209/262 79.8% 275/94230402 0.0% 15/262 5.7% 22623847 NA +9570 chr4 + 190214555 48602014 48602013 48602142 129 TCTTACCTTTAAATGTGACAAACAGTTCTGTAGGAAAATATGCCAGTTATTTAAAAAAAATTGTTTCTGACTGACACATAAAAGGCAGGTAATTAGTGGATATAAAGCCTAT-AGGAGACGGGGAAAAGA chr4 - 94230402 25977698 25977697 25977827 68252576 68252575 68252705 130 TCTTACCTTTAGATGTGACAAACAGTTCTGCAGGAAAACGTGCCAGTTATTTAAAAAAAACTGTTTCTGACTGACACACAACAGGCAGGTGATCAATGGATACAAAGCCTATGAGTAGGGGGGAAAAAGA ...........:..................:.......::....................:.................:..x........:..:.:......:.........-..x..:x...:...... 112M1I17M 114/129 88.4% 130/94230402 0.0% 1/129 0.8% 22624316 NA +10183 chr4 + 190214555 48603258 48603257 48603504 247 AATATGAAAAGGTTTGAAATGTTTCTT---AATACCAATGAATGCTTCTTTCTCGAGCTCAGTTCAAAAGTAGTCTGATAAAGCATCTCCACAAAATTTTTCAAACAGGGAACATTCACTTCATTTTTAACAGCCTAGTAAAAAGATAATGCAAACAA--------AGAAAATGATACAGATGTTAGATTAAACTATACA----AA-------GAATACAAGAACTTTC---TGTAAGGTTTGAAATTGGTTAATAATTCACTGAGACTCTC chr4 - 94230402 25979248 25979247 25979517 68250886 68250885 68251155 270 AAAATGGAGAAGTT-GAAATATTTCTTTAAAATACCAGCGAATGCTTCTTTCTTGAGCTCAAGTCAAAGGTAGTCTGATAAAGCATCTCCACAAAATTTTTCAAACATGGCACATTCACTTCATTTTTAACAGCCTATTAAAAGAAATACACACATAAACTGATTTAAAATTTTATAAAGAAGGTAT-TTAAAACATGCATTAGAACATCCCTGGATTTAAGAACATTCAAAAGTTAAATCTCACGTTGGCTAAGTATTTGATAACACTGTC ..x...:.:.:...-.....:......---.......::..............:.......:x.....:......................................x..x..........................x.....::.xx.::..x.:..--------.:..xx.x...x...x.x..x-.....x:..:..----..-------.:..x:......x...---x..x.::.:.x.x:....:...xx...::x.:.x...x.. 14M1D12M3I128M8I21M1D12M4I2M7I16M3I40M 191/245 78.0% 270/94230402 0.0% 27/245 11.0% 22624010 NA +10050 chr4 + 190214555 48605699 48605698 48605901 203 TGTATAACACACAAATGGTATGAAAATAAGAAAAATACTTACAGCAGCTACAGGGATAAGAATCTCCACAAATAAACCAGCAAGTGCATGTTTTATATCTTTATCTTTCACTTCTAAGAAATACTGAGCACATTCCTTAAAGGGAAAGAGGT---ATATACTTAGATTAACAAAAGAGGAAAGGTTAAAGAAT-TTGTAATATCACA chr4 - 94230402 25981970 25981969 25982172 68248231 68248230 68248433 203 TGTAAAAGAGGAAAATGGAATGAGGA-AAAAAAAATACTTACAGCAGCCACAGGGATAAGAATTTCCACAAACAAACCAGCAAGTGCATGCTTTATGTCTTTGTCTTTTACTTCCAGGAAGTACTGCGCACATTCCTTTGTGATGAAGAATTAAAACAAGTTT---TTGAAAAAAGAAGAAAGACTTAGAAATGTTATTATACCATA ....x..x.x:x......x....::.-..:..................:..............:........:.................:.....:.....:.....:.....:.:...:.....x...........x:x.:x:....:x.---.:.x::..---..:.x......:.....::.x.::...-..:.x...:..:. 26M1D125M3I8M3D27M1I13M 155/199 77.9% 203/94230402 0.0% 8/199 4.0% 22623729 NA +13234 chr4 + 190214555 48606433 48606432 48606608 176 ATCACCTGCATAAATTGAAATGATGCTTCAAAATCTTCTACAGGATACATTTTTACTCGAAAAAATTTCATTCCCATTATTAAGCTGATGACACTTTGTACCACATGTGGGCTTTGTTCCTTTTGTCGCAGTTCTTTTAATTCTGTCACAAACTTCTTCCTTACAGCCTGAAACCT chr4 - 94230402 25983043 25983042 25983218 68247185 68247184 68247360 176 ATTACCTGCATGAACTGAAATGATGCTTCAAAATCCTCCACGGGATACATCTTTACTCGAAAAAACTTCATTCCCATAATCAAACTGATGATGCTTTGTACTACATGAGGACTCTGTTCTTTTTGCCGCAGTTCTTTTAATTCAGTGACAAACTTCTTCCTAACAGCTTGAAACCT ..:........:..:....................:..:..:........:..............:...........x..:..:.......::........:.....x..:..:.....:.....:.................x..x..............x.....:........ 176M 153/176 86.9% 176/94230402 0.0% 0/176 0.0% 22623390 NA +7886 chr4 + 190214555 48608980 48608979 48609084 105 AACTTACTTTGATTGGGCAAGAACCCCTATCACCTCTGCATATAAATCAGCAATAATATGCACATTCCCAGTGTTGGTTCCTGAATATCTAAAATAACAAAAGAA chr4 - 94230402 25983620 25983619 25983724 68246679 68246678 68246783 105 AGCTTACTTTGATTGAGCAAGAACCCCTGTCACTTCTGCATATAAGTCTGCAATAATGTGCACGTTCCCAGTGTTGGTTCCTGAATACCTAGAAGAAAGAAAAAA .:.............:............:....:...........:..x........:.....:.......................:...:..x..x:...:.. 105M 91/105 86.7% 105/94230402 0.0% 0/105 0.0% 22625360 NA +7305 chr4 + 190214555 48609738 48609737 48609879 142 ACTTACCCTTCCTTATGTTTAAAGTGCTTAAAAGCTAAGTTTAGAACTTCATGAACTAAGGGATCGGGTACAGGATGAACAGGAATCTAGAATTTAAAAAAATTATCAAGTAAGAGTTAAATTATTGGTTTTTTATGAGTAT chr4 - 94230402 25984433 25984432 25984568 68245835 68245834 68245970 136 ACTTACCCTTCCTTATGTTTAAAGTGCTTAAAAGCCAAGTTTAGAACTTCATGTACTAAAGGATCTGGCACTGGATGAACAGGTATCTGAAAC-----AAAAGTGTTATGT-ATAGGTAAGTAATTATGCATATATGTGTGT ...................................:.................x.....:.....x..:..x...........x....::..:-----....x.:.:.x..-.x..x...:.x...:xx:x.x....x..:. 93M5D13M1D30M 110/136 80.9% 136/94230402 0.0% 6/136 4.4% 22625305 NA +9257 chr4 + 190214555 48619177 48619176 48619381 205 TAAAATTCTAGACACAGCATCTTAAAGTAACTGAAACACGAAGGCACAGTAAGCAAAGAATAAGGAATACAGACTTTGCAGAAATAAAA-GAGCTTACCTGCTTTAGAACTTCAACTAAAACTAAACAAAAAATGAAGTCTACTGCTAAGTCCCTCCTTTCAAGAAGATAATCTCTTTCACGTTGCTGTTCATCCCTGAAACAAGA chr4 - 94230402 25986875 25986874 25987063 68243340 68243339 68243528 189 TAAAATTTTAGAGGAGGTAACTAAAAGTGA-----------------GATGAAAAAATAATAATTAAGATAAATATATCAAAGACATAATAAACTTACCTGTTTTAGAACCTCTATTAAAACTAAACAAAAAATGAAATCTACAGCTAAGTCCCTCCTTTCAAGTAGATAGTCTCTTTCACGTTGTTGGTCATCCCTAGAATAAAA .......:....x:x:.:.x..x.....:.-----------------::.:.:x...x.....xx..x.:.:.:x.xx..:.:.:.x..-:.:........:........:..x.:.....................:.....x....................x.....:..............:..x........::..:..:. 30M17D42M1I116M 144/188 76.6% 189/94230402 0.0% 18/188 9.6% 22632302 NA +12785 chr4 + 190214555 48620624 48620623 48620784 161 AAATAAAGCACTTACCCCTTAGACTTTGTGCTAGACCGAGGCCTATATTCATAAGATTCATCTTCCGTTCCATTTTGGCGTCTGTACCAGTCAAACAAGGTGCGAAGTAAGGAAGGGAGACAGTGCTCTGCTACTGAGCTCATAGAGCTTATCAACTGAAA chr4 - 94230402 25987505 25987504 25987665 68242738 68242737 68242898 161 AAGGAAAACTCTTACCCCTTTGATTTTGTGCTAGATCGAGGTCTGTATTCATAGGATTCATCTTCTGTTCCATTTTGACGCCTGTACCAGTCAAACAAGGTGCGTAACAAGGAGGGGAGACAGTGCTCTGCTACTGAGCTCATAGAGCTTATCAACTGAAA ..:x...:.x..........x..:...........:.....:..:........:...........:...........:..:.......................x.::.....:............................................... 161M 144/161 89.4% 161/94230402 0.0% 0/161 0.0% 22633119 NA +5142 chr4 + 190214555 48623120 48623119 48623205 86 TCATACCTGATCAAACTGAAGATCTTCACCCCTCTGAAGAGATCTGGACAATAGCTTCTCCTATGATTAAA--AAAAACAAACATTAA chr4 - 94230402 25990330 25990329 25990417 68239986 68239985 68240073 88 TCCTACCTGATCAAACTGAAGATCTTCACCTCTTTGAAGAGATCTAGACAAGAGCTTTTCCTGGAAGAAAAGTAAGAAGAAATATGAA ..x...........................:..:...........:.....x.....:....:x:.xx...--..:..x...:..x.. 71M2I15M 71/86 82.6% 88/94230402 0.0% 2/86 2.3% 22632790 NA +3028 chr4 + 190214555 48632050 48632049 48632107 58 CTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATAT chr4 - 94230402 47152902 47152901 47152959 47077444 47077443 47077501 58 CTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATAT ..x:.x.................xx.:...x:x...:x.....x......:....... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 1479148 NA +3162 chr4 + 190214555 48632071 48632070 48632140 70 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATA------TATATATATATATATATATATGCGCACACAAA chr4 - 94230402 59708318 59708317 59708393 34522010 34522009 34522085 76 AAAAAAACAACATAAAACAAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACAAA .......x..x.x....x....:.:..x......:..x------.x.:.:........:.:...::.:........ 38M6I32M 53/70 75.7% 76/94230402 0.0% 6/70 8.6% -11076247 -83154155 +3017 chr4 + 190214555 48632075 48632074 48632113 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% -20805664 -73424738 +14598 chr4 + 190214555 48634285 48634284 48634513 229 ACTCACCAAGGGTTCGGCCATTACAACTTCAATTTTCTTTTCAGCTTGAACAGCAAATTCTGCAAAGAGGCTCTTGATGACATATTCACCAGGTTTGACATCTGGGTCAATCGTAATGTTTGACATGATGATATTTTTTTTTCCCCAAGTGGAATGAAAGTTGGAAGAAGCACAGTATTTATTTACTTTGCTGACTGGCGCTGAAGCT-------AAAAGTAAAAGAAACAAAAGA chr4 - 94230402 25997009 25997008 25997244 68233159 68233158 68233394 236 ACTCACCAAAGGTTCAGCCATTACAACTTCAATTTTCTTTTCAGCCTGAACAGCAAATTCAGCGAAGAGGCTTTTGATGACATACTCGCCAGGTTTTACATCTGGATCAATAGTAATGTTAGACATGATGATGCCTCTCTTTTCCCAAGTGGAAGCAACACTTGGAGAAACTCTGCGTTTATTTACTCTGCTGGGTGGCGTGGAGGCTATTGGAAAGAAGAAGAAGAAATGAAAAA .........:.....:.............................:..............x..:........:...........:..:........x........:.....x........x...........:::.:.:...:...........xx..x::.x.:....:.x.x.::..........:.....:x.....:x..:...-------.:...x.:......::...:. 208M7I21M 187/229 81.7% 236/94230402 0.0% 7/229 3.1% 22637276 NA +11543 chr4 + 190214555 48649603 48649602 48649808 206 AACATCCTCACGACACAGCTGGTTTAACAGAATGTTCCTGATTCAGTTTTTAAAAGAAGTAATGCCTAAAACTGTTGGCACAAAGACAAAATCCTGAATTTAGGCCATATGAATGTCACTTCATTGTTGTTACTGAAAGAAATAAGCTCAACTATAATCAAACTTCAG------CAGCACTGCATCAACATTCTGCCAGCTAAGCAGGCCCT chr4 - 94230402 26020682 26020681 26020892 68209511 68209510 68209721 211 AACACCCTCCCTACAGCACTGGTTTAAAAGGCCACGCCTGACTCC-CTTCAAAAAGAAGTAATGCCTAAAATTGTTGGCAGAGAGACAGCATTCTGAAACTAGGCCATACAAGTGTCACTTCATTGTTGTCAATGAAAGAAGAAAGATCAACTACAATAAAACCTCGGCCAGGCCAGCACTGCAGCAGCATTGTGCCAGCTAAGCAAGCCCT ....:....x.x...xx:.........x..:x:::x.....:..x-:..:x....................:........x.:.....:x..:.....x:.........::.:.................:.x........:x...x.......:...x....:..:.------..........x..:....x.............:..... 45M1D122M6I38M 163/205 79.5% 211/94230402 0.0% 7/205 3.4% 22628921 NA +3058 chr4 + 190214555 48655837 48655836 48655888 52 TACTATATATAATGTATTATATACATACATATATACACATACATGTATATAA chr4 - 94230402 16272575 16272574 16272626 77957777 77957776 77957828 52 TGTTATATATAATACTTTACATACATATATATAAACACATACATAAAAATAA .::..........::x...:.......:.....x..........:x.x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 32383262 NA +3526 chr4 + 190214555 48656312 48656311 48656391 80 TATTACATAATATATACTAAA--TATATTATATAATATATACTAAATATATTATATAATATATACTAAATATATAATATATA chr4 - 94230402 67910059 67910058 67910140 26320263 26320262 26320344 82 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATA .........xxxx........--....:...xx:...:...x..........:....xx:....:xx.....:..:...... 21M2I59M 61/80 76.2% 82/94230402 0.0% 2/80 2.5% -19253747 -74976655 +3375 chr4 + 190214555 48657246 48657245 48657319 74 CTGCAGCCTCAAACTCCTGGGATCAAGCCATCCTCCCACCTCAGCCTTTCAAGCAGCTGGGTAGACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..:..:.....x.....:xx.:.x.xx:x..............:......:xxx...x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 30460120 NA +4443 chr4 + 190214555 48659361 48659360 48659622 262 AAAAAAAGAGAGAGAAGAAGAAGGAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAA-------GGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAGG-----------AGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAG--------------GGAGAAGGAGAAGAGGGAGAAGGA chr4 - 94230402 27548008 27548007 27548296 66682107 66682106 66682395 289 AAGAACTGAGGCAACACGAGACTGAGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAG-----GAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGA ..:..xx...:x.:x.x:...xx.....:x:.x:xx.....:.:...:.::::..-------.::...x:.:....:xx..x....x.::.x:.......:::.x.::::x.....xx.............xxxxx.....xx..::x.:..xx::.:x.:.:::......xx..:..-----------.:....::..x:....::.:.x.x..x.xxx....-----...:.....:..:x...:.:...xx.:--------------.......:.:x...:.x..:.:.. 55M7I116M11I35M5D27M14I24M 153/257 59.5% 289/94230402 0.0% 37/257 14.4% 21111353 NA +4300 chr4 + 190214555 48659363 48659362 48659607 245 AAAAAGAGAGAGAAGAAGAAGGAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGAAGAAGAGGG-----------AGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAG--------------GGAGAAGGAGAAGAGGGAGAAGGA chr4 - 94230402 27548032 27548031 27548296 66682107 66682106 66682371 265 AGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAG-----GAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGA .:...x:.x.xx.:..:....::...:..:.xx.:xx:..:.:.x..::....xx..x:.:.x..:.x:.:..:...:.:x.::::x.....xx.............xxxxx...:.xx..::x.:..xx::.:x.:.:::....:.xx.....-----------.:....::..x:....::.:.x.x..x.xxx....-----...:.....:..:x...:.:...xx.:--------------.......:.:x...:.x..:.:.. 154M11I35M5D27M14I24M 141/240 58.8% 265/94230402 0.0% 30/240 12.5% 21111331 NA +3324 chr4 + 190214555 48659389 48659388 48659482 94 GGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAG chr4 - 94230402 40465775 40465774 40465863 53764540 53764539 53764628 89 GGAGAAG-----GGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAG .......-----.:.x..x...:.x:..:.:.:.x...::..x...:....:x..:x.x...:.::..::........::.:...::..::... 7M5D82M 58/89 65.2% 89/94230402 0.0% 5/89 5.6% 8193614 NA +3245 chr4 + 190214555 48659404 48659403 48659497 94 GGAGAAGG-AGAAGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAG chr4 - 94230402 40465775 40465774 40465863 53764540 53764539 53764628 89 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAA---GCAAGGGGAAATGGGTGTGGAGGGAGGGA---AAGAGGAAAGGAGAGGGGAAAAAG ........-.x:.x:....x.....:...x....:.---.x...:....:x...x.x:....:..:.:---........::.:...::...:... 8M1I27M3D29M3D24M 64/88 72.7% 89/94230402 0.0% 7/88 8.0% 8193629 NA +3267 chr4 + 190214555 48659426 48659425 48659507 82 AAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAGGAAGAGGGAGAAGAAGAAGAGGGAGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ..........x..x..x...x.x.xx.:x.:xx............x:........:....:.:x:..xx.:...:.x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% -10662722 -83567680 +3052 chr4 + 190214555 48659498 48659497 48659604 107 AGGGAGAAGAAGAAGAGGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAA chr4 - 94230402 81479729 81479728 81479835 12750568 12750567 12750674 107 AGGGAGAAAAAGAGCAGGCTGGATAGGATGGAAATGAAGAGCAGATCTGAGAAGCTGGGGAGGGAGAAGGGGAGAGGAGACAAAGCCAAACAGAATGAAAGTGAGAA ........:....:x...xx.:.x...:x.:.::x......x:::xxx......xx..:..:.......:..::::::..x..::xx:.:x..:.x:.:..x..... 107M 63/107 58.9% 107/94230402 0.0% 0/107 0.0% -32820231 -61410171 +3413 chr4 + 190214555 48659511 48659510 48659639 129 AGAGGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312665 1312664 1312802 92917601 92917600 92917738 138 AGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..:.:.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 89M1I30M8I10M 78/129 60.5% 138/94230402 0.0% 9/129 7.0% 47346846 NA +3357 chr4 + 190214555 48659523 48659522 48659654 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346861 NA +3357 chr4 + 190214555 48659538 48659537 48659669 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346876 NA +3357 chr4 + 190214555 48659553 48659552 48659684 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346891 NA +3357 chr4 + 190214555 48659568 48659567 48659699 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346906 NA +3357 chr4 + 190214555 48659583 48659582 48659714 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346921 NA +3357 chr4 + 190214555 48659598 48659597 48659729 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346936 NA +3357 chr4 + 190214555 48659613 48659612 48659744 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346951 NA +3357 chr4 + 190214555 48659628 48659627 48659759 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346966 NA +3357 chr4 + 190214555 48659643 48659642 48659774 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346981 NA +3357 chr4 + 190214555 48659658 48659657 48659789 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47346996 NA +3357 chr4 + 190214555 48659673 48659672 48659804 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47347011 NA +3357 chr4 + 190214555 48659688 48659687 48659819 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47347026 NA +3357 chr4 + 190214555 48659703 48659702 48659834 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------......:... 92M1I30M8I10M 79/132 59.8% 141/94230402 0.0% 9/132 6.8% 47347041 NA +3479 chr4 + 190214555 48659718 48659717 48659849 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGGAGAAGAGG--------GAGAAGAAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:..:..x.:x.--------.......... 92M1I30M8I10M 80/132 60.6% 141/94230402 0.0% 9/132 6.8% 47347056 NA +3384 chr4 + 190214555 48659733 48659732 48659867 135 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG-GAGAAGGAGAAGAGGGAGAAGAAGAAGGAG-----AAGGAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.::..::..:..::.::..:..:..:.-....:.:.:...:x:..:.:.::..x..x.-----.x:......:... 92M1I30M5I13M 80/135 59.3% 141/94230402 0.0% 6/135 4.4% 47347071 NA +3403 chr4 + 190214555 48659748 48659747 48659879 132 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGG----GAGAAG-GAGAAGAGGGAGAAGGAGAAGAGGGAGAAGAAGAAGGAGAAGGAGAAGGAG-----AAGGAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAG-GAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.----......-.:.:..:...:.:....::x...:.-...:...:x:..:.:..:..x..x.-----.x:......:... 62M4I6M1I25M1D25M5I13M 85/131 64.9% 141/94230402 0.0% 11/131 8.4% 47347086 NA +3242 chr4 + 190214555 48659778 48659777 48659915 138 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAG-----AAGGAGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAA--AGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx:.x..:.........x.xxx.:::.::...:..:..:.::.::....x:::....:..--..:x:..:.:..:..x..x.-----.x:......:... 103M2D20M5I13M 80/136 58.8% 141/94230402 0.0% 7/136 5.1% 47347116 NA +3293 chr4 + 190214555 48659808 48659807 48659948 141 GGGAGAAGGAGAAGAGGGAGAAGGAGAAGAGGGAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x..:::.:...::x...x.::..:x...x......:x::.xxx..x.....:..:...x.xxx.::..::...:..:..:.::.::....x:::....:..:.:x.:::..::.:.x::x:xx.:x.x::......... 141M 76/141 53.9% 141/94230402 0.0% 0/141 0.0% 47347146 NA +3370 chr4 + 190214555 48662733 48662732 48662796 64 CTTGGCAACATAGCAAGATCTCATCTCCTGAAGAAAAAAAAAAAAAAAAAAAGCAGGAAATTAT chr4 - 94230402 36313569 36313568 36313632 57916771 57916770 57916834 64 CTTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAAGCAATAGACTGT .......:.....x....x.x:x...x:.x..:.......:..............:x.:.:.:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 12349164 NA +3260 chr4 + 190214555 48671853 48671852 48671916 64 AAAAACAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAGAAGGAAAGACAGAAAAA-GGTGCTC chr4 - 94230402 77498341 77498340 77498405 16731998 16731997 16732062 65 AACAACAATGAAAAAAAAAACAACATGTAAAAAAGGGTGGAAGGAAAGGCAGAAAAACAGTGCTC ..x.....x:.............x.x:x......:::x:.........:........-:...... 57M1I7M 50/64 78.1% 65/94230402 0.0% 1/64 1.6% -28826488 -65403914 +3079 chr4 + 190214555 48737261 48737260 48737302 42 AAAAAAAAAAAAAAAAAGAGAGAGAAAGAGGGGACAACCAAT chr4 - 94230402 87676347 87676346 87676388 6554015 6554014 6554056 42 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAAT ...............:.........:....:.:.:...x... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -38939086 -55291316 +3973 chr4 + 190214555 48760753 48760752 48760834 82 TGCAACCTCCGCCTCCTGGATTCAAGTGATTCTTATGCCTCAGCCTCTCGAGTAGCTGGGACTACAGTCGTGCACAACCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:..:..:xx:x..:....:........x...x:.x.x........:..:.........:......--.......x..::.. 66M2D14M 60/80 75.0% 80/94230402 0.0% 2/80 2.5% 30563626 NA +3039 chr4 + 190214555 48770948 48770947 48771013 66 AAATACTAAACTAAGAATCAAAGCACAGTTCTTTTTTTGTTTGTTTTTTGTTATTTCCTTTCAAAT chr4 - 94230402 13677680 13677679 13677745 80552658 80552657 80552723 66 AGACATTCAACCAATAATTGAGGCACAGTTTTTTGTTTTTTTGTTATTTGTTGGGTTTTTTTGAAT .:.:.:.x...:..x...::.:........:...x...x......x......:xx.::...::... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 35093268 NA +3093 chr4 + 190214555 48776038 48776037 48776099 62 GAGGTTAAAAAAAAAAAGAAAAAGAAAAAAAGGAAAAAAAAAACCTGAAAGAATAAACAACC chr4 - 94230402 29816354 29816353 29816415 64413988 64413987 64414049 62 GATACTAAAAAAAAAAAAATAAAGGAGAGGAGGGGAAAAAAAACCAAAAACATTAGAGAACC ..x::............:.x....:.:.::...::..........x:...x.x..:.x.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 18959684 NA +3131 chr4 + 190214555 48797531 48797530 48797604 74 AGGAAAAGACAGAAGAGAAAGGAAGAAGGAAAGAAAGAAAGAAAAGGAAGGAAAAGAAAGAAAAGAAGAGAAAG chr4 - 94230402 65614384 65614383 65614455 28615948 28615947 28616019 72 AGCAAAAGGAAAAAGGGAGAG--AGTAGAAAACACAGAATGACAAGTGAAGCAAAGGAGAAAAAGAAGAGAAAG ..x.....:x.:...:..:..--..x..:...x.x....x..x...x:.:.x....:.::.............. 21M2D51M 53/72 73.6% 72/94230402 0.0% 2/72 2.8% -16816853 -77413549 +3051 chr4 + 190214555 48798908 48798907 48798970 63 AGAAAGAAAAAAGAGAAAGAGAAGGAAGGAAGGGAAGGGAGGAAGGAAGGAAGGAGAGAGAAG chr4 - 94230402 32025575 32025574 32025637 62204766 62204765 62204828 63 AGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAG ....x:...::.......:.....:.......:x..:...:....:xxxx:....:.x..... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 16773333 NA +3137 chr4 + 190214555 48799881 48799880 48799950 70 AGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACA chr4 - 94230402 34399246 34399245 34399315 59831088 59831087 59831157 70 AGGTTCTTCCTATGCAAGATAAAAAAAAAAAAAAAAAGAAACACACAAAACCACACAAACCACATGCACA ..::...x:..xx:x..:.x.................:.x.......x.xx.........x...x:x... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 14400635 NA +3238 chr4 + 190214555 48799894 48799893 48799947 54 AAAAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAA chr4 - 94230402 52796033 52796032 52796086 41434317 41434316 41434370 54 AAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGA ...x..x..x.......:.:.:..........:.............:.x.x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -3996139 -90234263 +3112 chr4 + 190214555 48799896 48799895 48799962 67 AAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAACATGTTTCTTT chr4 - 94230402 21325750 21325749 21325816 72904587 72904586 72904653 67 AAAAGAAAAAAAAAAAAAAAAGAACATCTGCAAAAATCTACAAATAATAAAAGCAGATTGCTACTCT ....:................:....:x::..x.x.:x:.....:..:....:..:xx..:.x..:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 27474146 NA +3214 chr4 + 190214555 48799896 48799895 48799953 58 AAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAACA chr4 - 94230402 39735306 39735305 39735363 54495040 54495039 54495097 58 AAAAACAAAAACAAAACAAAAAAACCCACACAAACACCCCCCCACAACAGCAACAACA .....x.....x....x........x......x....x.x.xx......:x....... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 9064590 NA +3136 chr4 + 190214555 48799898 48799897 48799960 63 AAAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAACATGTTTCT chr4 - 94230402 62846380 62846379 62846442 31383961 31383960 31384023 63 AAAAAAAAAAAAACAACAAACACACACACACAAACCCCCAGATATTGAAATCAAATTATTTCT .............x..x...x...........x..x.x..:.:.x::...x...xx.:..... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -14046482 -80183920 +3131 chr4 + 190214555 48799899 48799898 48799947 49 AAAAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAA chr4 - 94230402 39968916 39968915 39968964 54261439 54261438 54261487 49 AAATACAAAGAAAAAAGAAAACAAACACACACACACAAAAACAATCAAA ...x.x...:......:......x.............x......:x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 8830983 NA +3087 chr4 + 190214555 48799901 48799900 48799951 51 AAAAAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAA chr4 - 94230402 3417584 3417583 3417634 90812769 90812768 90812819 51 AATGAAGAAACAGGAGAAACACACACACACAAACAAAAACAACAACAACAA ..x:..:...x.::.:...............x...x.........x..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 45382317 NA +3167 chr4 + 190214555 48799904 48799903 48799952 49 AAAAAAAAAAAAAAAACACACACACACACACACAAACAACAAAAACAAC chr4 - 94230402 56248436 56248435 56248484 37981919 37981918 37981967 49 AAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAAC ...:x...:.x...x.............:.............x..x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -7448532 -86781870 +3230 chr4 + 190214555 48812281 48812280 48812370 90 TCAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAACTAAATTTGGCATTTATGATATGGTATTTAAAGCCTTG chr4 - 94230402 52634659 52634658 52634751 41595652 41595651 41595744 93 TTAAAAAAAAACTGAAAAAAAAACCAAAAAAAACTGAAACAAATTAAAACCAAAAGCAATTTTACCATCTGTTGTATATTAATTAGAACTTTG .:.........---.........xx........xx:...x...xx....xx....x:..x...:x...:.:.x:...:x..x...:.:.:... 11M3I79M 64/90 71.1% 93/94230402 0.0% 3/90 3.3% -3822378 -90408024 +3190 chr4 + 190214555 48812298 48812297 48812373 76 AAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAACTAAATTTGGCATTTATGATATGGTATTTAAAGCCTTGACA chr4 - 94230402 80007183 80007182 80007254 14223149 14223148 14223220 72 AGAAAAAAAAAAAAAAAGAGAAAAGAAAGAATTAATTAAAGTCAGTATTCTTAATAT----TTTCAAGAAATGACA .:...............:..........:.:xx..:....x.::.:...:x.:....----...x...xxx..... 57M4D15M 54/72 75.0% 72/94230402 0.0% 4/72 5.6% -31194885 -63035517 +3570 chr4 + 190214555 48825741 48825740 48825877 137 TCTTGCTCTTGTATTTT----CTCTTTCTTTCCCTCCCTCCCTCCCTTCTCTCTCTTTCTCTCTCTTCTTTCTTTCTTACTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCATCTTACAAGAGCCTCACTCTGTTG chr4 - 94230402 9693726 9693725 9693855 84536548 84536547 84536677 130 TCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTA--TTTTTGTTATTTTTTTCTTTCC-------CTTTCC--CTTGACAAGGCCTCATTCAGCTG ....x......x..x:.----..x:.xx...:x..x.x.xx..:.:.:.....:.....:..:.:.....:x:...:..--..:..x..x...:.......:.-------......--...:xx.::......:..x.:.. 17M4I58M2D22M7D6M2D23M 88/126 69.8% 130/94230402 0.0% 15/126 11.9% 39132015 NA +3140 chr4 + 190214555 48825799 48825798 48825879 81 CTCTTCTTTCTTTCTTACTTTCTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCATCTTACAAGAGCCTCACTCTGTTGCC chr4 - 94230402 68077852 68077851 68077932 26152471 26152470 26152551 81 CTCTCCTTCCATTTATTTGTTTTGTTTGTTTTTTTCTTGTGTGTCTTTTTTTCCCTGGTATAAGAGCCGCACTGTTTTATC ....:...:.x..:x.x:x..:.x...x...:......x.x.x.....:.....x.xx..:.......x....x.x..::. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -19252053 -74978349 +3325 chr4 + 190214555 48843695 48843694 48843759 65 TTCTGTATTGTGA-AACAACAACAACAACAACAACAAAACAAAAAAAACCCCACTTGAATTACATT chr4 - 94230402 29762476 29762475 29762541 64467862 64467861 64467927 66 TTCTTTATAGTGGCAACAACAACAACAACAGCAAAAAAAAAAAAAAAAACCCACCCTTTTTATATT ....x...x...:-................:...x....x........x.....::xxx...:... 13M1I52M 52/65 80.0% 66/94230402 0.0% 1/65 1.5% 19081219 NA +4809 chr4 + 190214555 48851894 48851893 48852015 122 CTTCCTCATTATGAGCCAATTCCATTCAGTTCTTCTATGAATGAATCTGCTCCCACTGGTATTACTGATCATATTGTCCAAGGTAGAAACTTCTCTTGAAATGAATTTCAACATTTTATGGT chr4 - 94230402 26074480 26074479 26074595 68155808 68155807 68155923 116 CTCTCTAGTTACGAACCCGTTCCATTCAGTGCTTCCCTGAATGAGTCTTCACCTACAGGAATTACCGATTATAATGTTCAAGGTGGGATCTG-TCTTAATA-----TTTAGCAATTTGTAGT ..::..x:...:..:..x:...........x....:x.......:...x.x..:..x..x.....:...:...x...:......:.:.x..x-....:.x.-----..:.:..x...:.:.. 92M1D8M5D16M 84/116 72.4% 116/94230402 0.0% 6/116 5.2% 22777414 NA +3517 chr4 + 190214555 48852840 48852839 48852898 59 TGAAATTCAAAAAGGTTTAAGCCAAGTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTT chr4 - 94230402 79220496 79220495 79220554 15009849 15009848 15009907 59 TGAATTTCAATGAGTTTAAAATCAAGTCTTTTTCGATTTCTTGTTTTTTTTTTTTTTTT ....x.....x:..x..x..::.....:.....:x:...:................... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% -30367656 -63862746 +7145 chr4 + 190214555 48857198 48857197 48857445 248 TGTTTGTTGTTTT---AGGACCTGATCCCAACCTTGAAGAAAGTCCTAAAAGAAAAAATATTACATATGAGGAATTAAGGAATAAGAACAGAGAGTCATATGAAGTATCTTTAACACAAAAGACTGACCCCTCAGTCAGGCCTATGCATGAAAGAGTGCCAAAAAAAGAAGGTATGATAGTTTAGTCTGAATCACTTTACTGTTGAGGATTGGAAACTAAAACATTACTTTAAAACAATACTATAAAAAAT chr4 - 94230402 26075923 26075922 26076151 68154252 68154251 68154480 229 TGTTTGTTGTGTTTATAGAAACTCCTCCAATTCCAGAAGAAAGTCGTAAAAAAAAAAGTGTCACGTATGAGGAATTAAGGAATAAACACAGGGAGACATATGAAGTAATGTCACCACTGAAGGCAGAAACTCCAGGCAAATTTCCCCAGGAAAGA---CCAGTTAAGGAAGGTA------------CTGTGCTGATTTACAACAATAGGTGGTAAATTCAAACAGT-------AGCAATAATTTGAAAGAT ..........x..---..:.x..xx...x.x:.:x..........x.....:.....:.:.:..:....................:x....:...x...........x:x.:.x...x:...:.x..xx.::...x..::::.x:x..x......---...:xx..:.......------------...x::::x.....x::x:x:.:.x.x...:.x.....x.-------.:.....x.x.:...:.. 13M3I139M3D16M12D40M7D18M 156/226 69.0% 229/94230402 0.0% 25/226 11.1% 22781275 NA +4007 chr4 + 190214555 48860703 48860702 48861169 467 ATTATTTATGCTTTTTTCCTAGTCAAAGTAAACAAGTATGGAGATACTTGGGATGAGTGAAAAATTACATCATTGGACATGAAGGAG---------TTTCAAC---ATCCAGCTTCATCTA-GGTGGTCATGATTACCTGCATGCTT--TGAGCTC-----AGCAGCAGTCTTCATAAACACATTTAAAACAAGATCCTGGGTTTTTGTGGTTTGACTTCTATGGTGTTTTAAAAAAACACAGATTTTTAGTGTTAATATTGTGTAAATGTACTCACCTTAGGGATTCATTTGAATGATGGTATTATACCATGATTGTATACAGTTTGTGAAATTGTT--GCAAGGGCAAAGATAACTCTTAAAAAACCGT-CGAGATTACAATGCTCTAGAATCAGCATATAAGAAAATAAATGATATCTGCATGTTGAATTGGGGTGGATGGGGGGAGCAAGCATAATTTTT---AAGTGTGAAGCTTTGCATCAAGAAAT chr4 - 94230402 26078708 26078707 26079157 68151246 68151245 68151695 450 ACTGTTTCTTTCTCTTCTTTAGTTAAAGTAAATAAATATGGAGATACCTGGGATGAAT-AAGAACAGAATGA--AGAACTGAAGAAAATTCTCTTCTGTCAGCTCAATTGAGTTTCATCTATGTTAGTCACGGATGCTGGTACGTTTGGTGTGCTCTGCCAATCAAAGGTATTAATAAA-----TTAGGAGAAAATC---------------TCAACTTGCCAGAAGATGTAAAAGAATATA----TTTAGGCTTAACGTCATTT---TTTATTTTGCATAAGTGGTGAGCCAGGCTGCTGTGAGGTGTCATGGTTGTAAACCATTTGTGCTGTTATTTAAGAATGAAGAAGGTAACTAGCAATAACTCATATGAATGTATAAGA----AAGGGTAAAATGTATGTAAATAAAAGCAAT-TGC---TTGTATTGGGAT-----GGGAAAAATGTCAAAATCTTCTGAAATTTTCAAGATTTGCATTAAAAGGT .:.:...x.x::.:..:::....:........:..:...........:........:.-..:..:x:x..x.--:..xx.....:.:---------.x...:.---..:x..:........-.x.:....:.:x.:.:x.:.:.:..--..x....-----.x..:x:..x..x.....-----...::.x..:...---------------.::....x:xx.:x.x.x.....:..:.:.----.....xx....::.::.x.---.x..:.:xx.x..:.x:x.x.x::::::x::x..:xx:.::....:.....x..x:......xx:..:..--:x..x.:x:...:.....xx:..x..x:.:.-:..:xx..:..x:----.:::x:.:x..:..x.x.......x.xx..-...---...x......:.-----...::.:xx:x..x...:..:---..x.x.x...x.......:..:.::. 58M1D13M2D13M9I7M3I15M1I25M2I7M5I18M5D13M15D30M4D19M3D70M2I31M1I13M4D30M1D3M3D12M5D21M3I26M 261/424 61.6% 450/94230402 0.0% 69/424 16.3% 22781995 NA +3488 chr4 + 190214555 48872044 48872043 48872126 83 CATTGTGCCCTGCAGCCTTGAACTCCAAGGCTGAAGTGATCCTCTCACCTAAGCTTCCCGAGTAGCTAGAACTACAGGTGCAC chr4 - 94230402 18197117 18197116 18197199 76033204 76033203 76033286 83 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...::..::..:.....:x:.:..:.x:..:.x.....x.:.x.xx:x..x...:.::.:.......:........x...... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 30674927 NA +3298 chr4 + 190214555 48873550 48873549 48873607 58 GCGGGAAGCCAGTGGAATAAATGTATTTCTATCTGAAAAAAAAAAGTTTGTCAGAATT chr4 - 94230402 91372084 91372083 91372141 2858262 2858261 2858319 58 GCAGGAATACAGTGAAATAAATATACTTCTATTTGGAAAAAAAAAGGCCACCAAAGTT ..:....xx.....:.......:..:......:..:..........x::::..:.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -42498534 -51731868 +3072 chr4 + 190214555 48883574 48883573 48883626 53 TGGAAGGGTTTCTTTTTTTTTCCTTTCTTTCTTAATTTTTTTTTTTTTTTTTA chr4 - 94230402 87666905 87666904 87666957 6563446 6563445 6563498 53 TGTGAGGGTTTTTTTTTTCTTCCTTTCTTCCTTATCTTTCCATTTACTTTTTA ..x:.......:......:..........:....x:...::x...x:...... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -38783331 -55447071 +3391 chr4 + 190214555 48901818 48901817 48901891 74 CTGCAGCCTCGAACTCCTGGGCTCAAGTTAACCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.:..:.....:......xxx:.x.xx:x........::::.........:....:.x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 30704692 NA +3313 chr4 + 190214555 48910282 48910281 48910411 130 CCTTCCCTTCCCTTCCCTTCCTTCCTTCTTTCCTTCCTTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCCTCTCTCTC chr4 - 94230402 93005073 93005072 93005192 1225211 1225210 1225330 120 CCATCCCGCCCCATCCTCCCCTCCCCGTGCAGCTGCCTGGGCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTC----------TCAGTCCTCTTTCTC ..x....x:...x...:::...:..:x:x:xx..x...xxx...x:.......:..:x........:x.xx:.x:.:...::..:..x......:x..:.:x...----------..xx......:.... 105M10D15M 76/120 63.3% 120/94230402 0.0% 10/120 8.3% -44094791 -50135611 +3969 chr4 + 190214555 48931292 48931291 48931397 106 GGCTCACTGCA-ACCTCTACCTGCCAGCAACCTCTGC---------CTCCTGGATTCAAGTGATTCTCCTGTCTCAGCCTCTCGAGTAGCTGGGATTACAGGTGCCCACCACCATG chr4 - 94230402 18197093 18197092 18197206 76033197 76033196 76033310 114 GGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ....:.xx...-..x...:.:..x..x..xx:...:.---------..:....:........x...x.xx.x........:..:.........:.:....x...--......::.. 11M1I25M9I58M2D10M 78/104 75.0% 114/94230402 0.0% 12/104 11.5% 30734199 NA +3124 chr4 + 190214555 48936101 48936100 48936151 51 AAGCAAAGAAGCAACAACAACAAAAACAACAATAAAAAGAGCAGACCAGTT chr4 - 94230402 30247807 30247806 30247857 63982546 63982545 63982596 51 AATCAACAAAGCAACAATAACAAAAACAACAAAACAAAGAGTAGACAACTT ..x...x:.........:..............x.x......:....x.x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 18688294 NA +3166 chr4 + 190214555 48942725 48942724 48942789 65 TCTTTCCTTCCTTCCTTCTCTCTCTTTCTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCT chr4 - 94230402 45597713 45597712 45597777 48632626 48632625 48632690 65 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCT ...:.::...x...:.:.x..::...:.x:..:.....:.::...x.........::.x...... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 3345012 NA +3541 chr4 + 190214555 48942740 48942739 48942894 155 TTCTCTCTCTTTCTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTCCTCTCTCCTTCCCTCCCTCCC--TTCCTTCTCTTTTTCTCTCTCTTTTTCTTTCTTGCTTTCTTTCTCTCTCTCTCCC--TTCCTTCCTTCC chr4 - 94230402 17604543 17604542 17604701 76625702 76625701 76625860 159 TCTTCCTTCTGTGCATCTTTATTCTTATTTTTTCCACAGTCCTTCTGTATTTGTTTTCCACTCTGTTCTCTCTGTTCCACTTCTATCCTATTTGTTTTTTGTTTTGTTTTGTTTTCACTTCGCAGCTTCTTTCCCTTGTTTACCCAGTCCCATCCTACC .::..::...x.x:x...:.x.....x:....:::x.xx..:....x.x...x:.....x:...x.:......x:.:.x..:.:x:..--..:x..:.:.x...:x:.:.x....:x:...x::x:.......:..:x:.:x...--.:..x....x.. 88M2I55M2I12M 93/155 60.0% 159/94230402 0.0% 4/155 2.6% 31338197 NA +4592 chr4 + 190214555 48942744 48942743 48942888 145 CTCTCTTTCTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTCCTCTCTCCTTCCCT---CCCTCCCTTCCTTCTCTT----TTTCTCTCTCTTTTTCTTTCTTGCTTTCTT---TCTCTCTCTCTCCCTTCCTT chr4 - 94230402 45185589 45185588 45185743 49044660 49044659 49044814 155 CTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x:....:....::..xx.:..xx..:.:.x....x................x...:.:x...:...:...:.:.---.:..:..:.:::..x...----:.....x..x:..x.......x:.:x:.::---.....:x:...::::..:.. 77M3I18M4I30M3I20M 96/145 66.2% 155/94230402 0.0% 10/145 6.9% 3757155 NA +3055 chr4 + 190214555 48942749 48942748 48942834 86 TTTCTCTCTCTCTTCTTTCTTTTCTTTCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTCCTCTCTCCTTCCCTCCCTCCCTTCCTTC chr4 - 94230402 83048905 83048904 83048990 11181413 11181412 11181498 86 TTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTCAGCGCTTCTCC ...:...:...x.::............:::.x:x.:.::.x::...x...x.x.x.:.........x....:::.xx.x:.:..:. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% -34106156 -60124246 +3180 chr4 + 190214555 48942775 48942774 48942900 126 TCCTTCTTTCTTTCTTTTCTTTCCTTTCTTTCCTCTCTCCTTCCCTCCCTCCCTTCCTTCTCTTTTTCTCTCTCTTTTTCTTTCTTGCTTTCTTTCT---CTCTCTCTCCCTTCCTTCCTTCCTTCTCT chr4 - 94230402 40845016 40845015 40845141 53385262 53385261 53385387 126 TTTTTCTTTTGTTGTTTTTTTTCCCCCCTCACCTTTCTCTAGCACAGCCAGTTTTTCTTATCTTTTTCTTTC---TTTTCTTTCTCAACTCCAGTTGAGATTATTTCTCCAGTTCTTCTCGTTTCCTCT .::......:x..x....:.....:::..:x...:....:xx.x.xx..xx::..:...x.........:..---..........::x:.:.xx.:x---:.x.:.....xx.:....::x::.:.... 72M3D22M3I29M 77/123 62.6% 126/94230402 0.0% 6/123 4.9% 8097759 NA +3141 chr4 + 190214555 48942891 48942890 48942947 57 TTCCT--TCTCTTTCCCTCCCTCCCTCCCTCCTTCCTTCCTTTTTTTTTTTTTTTTGTA chr4 - 94230402 43997987 43997986 43998044 50232359 50232358 50232416 58 TTCCTCATTTCTTTCCAGCCC-CTCTGCCCCCCCCCTTCCTTTTTTTTTTTTTTTTGTA .....--.:.......xx...-.:..x..:..::......................... 5M2I14M1D37M 48/56 85.7% 58/94230402 0.0% 3/56 5.4% 4944904 NA +3891 chr4 + 190214555 48955290 48955289 48955430 141 TTTTCTTTTCTTTTCCTTTTCCCTTTCCTTTCCTTTCCTCTTCTCTCCTCTCCTTTCCTTCCTTCCTCCTTCCTCTTTCCTCCTTCCTC---CTTCCTTCTTCCTCCTTCCCTT-----CCCTTCTCCTCCCTCCCTCCCTCCCTCCCT chr4 - 94230402 61964779 61964778 61964917 32265486 32265485 32265624 139 TTCTCTATTATTTTCCTTCT----------TCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT ..:...x..x........:.----------...:.:.....:..........:....:.:.:.:.x::x:x.x.x:x.:........:.---..:..::.:..x:x..:.:.x:-----.:.:.....x:x......x.x....:..:. 20M10D59M3I22M5I30M 87/131 66.4% 139/94230402 0.0% 18/131 13.7% -13009489 -81220913 +3503 chr4 + 190214555 48955423 48955422 48955490 68 CCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCCTCTTCTATTTTCAGACAAAG chr4 - 94230402 78956228 78956227 78956295 15274108 15274107 15274175 68 CTCCCCCTCCCTCCCTGCCTTTCCCCCATTTTTAATTCCCTTCTCCTCTCTTCTATTTGAAAACCAGG .:.:............x....:.::..x.::..xx....:.:....:...........xx.:..x.:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -30000805 -64229597 +3993 chr4 + 190214555 48959993 48959992 48960075 83 TTACTTACTGTGTGACCTTAGGTAAGTTATTTAACCTCTCTGTGGCCCAGTTTTCTCATCTGAAAGCAAAATAATAATAGTGC chr4 - 94230402 11947208 11947207 11947286 82283117 82283116 82283195 79 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGT----ATGAAATGATTATAATAC .:...x.................x...:.:....:..x:.....x........:.:...x.----:::....:..x...:.:. 61M4D18M 60/79 75.9% 79/94230402 0.0% 4/79 5.1% 37012785 NA +3007 chr4 + 190214555 48979460 48979459 48979519 60 TCTACTAGTAGAGAGTCCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 48657023 48657022 48657082 45573321 45573320 45573380 60 TCTGCTAATAGAAGGCCTCTGTACCTTTGTATTTGCTTTTTTTTTTTTTTTTTTTCTTCT ...:...:....::.:.::x..x::...x.x...x:...................:..:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 322437 NA +10773 chr4 + 190214555 48988446 48988445 48988673 228 TTTCTCTCTTTAACTTTTTTTTTTTTTGTAGGATGTGTTTCTTGGTCTCTCTACCATGACCTGGGACCGATGATCTATTACTTTCCTTTGCAAACACTAGAACTCACTGGGCTTGAAGGTTTTAGTATAGCATTTCTTTCTCCAATATTCCTAACAATTACTCCTTTCTGGAAATTGGTTAACAAGAAGTGGATGCTAACCCTGCTGAGGATAATCACTATTGGTAAG chr4 - 94230402 26100026 26100025 26100252 68130151 68130150 68130377 227 TTTCTTTCCTTTCCTTTTTTTCTGTTT-CAGGCTACATTTCTTGGTCTCTCTACCACGCCCTGCCACCAATGATCTATTACTTCCCTCTGCAGACACTGGCACTTACTGGTTTAGAAGTTTTTGCAGTTGCCTTCTTGTCTCCAGTATTCCTGATAATTGGTCCCTGTTGGAGGCTGGCTAACAATAAGTACATCCTTGCCCTTCTGAGACTGACTGTGGTTGGTGAG .....:..:..xx........:.x...-:...x.:::...................:.x....xx...:..............:...:....:.....:.x...:.....x:.x....x....:xx:.x..x..::.x......:.......:.:....:x...:.x:....:::...:......x....:x..x..x:....x.....:x.:.::::x:.....:.. 27M1D200M 163/227 71.8% 227/94230402 0.0% 1/227 0.4% 22888420 NA +6296 chr4 + 190214555 48991443 48991442 48992094 652 TTTGTTTGTAGGCAGCATAGCCTCCTTCCAGGCTCCAAATGCCAAACTTCGACTGATGGTTCTTGCGCTTGGGGTGTCTTCCTCACTGATAGTGCAAGCTGTGACTTGGTGGTCAGGAAGTCATTTGCAAAGGTATGGTTAATGTTTCATGTACTTATAGACAAACAAGTATAACCAGTTACCAAAGGGAAACCTGGGGCCAGGAGTTCCAGGTTATAGTTTTTACCTTCCATATGGCTTTGTCAAAGTCTCCTTTTTTTTCCTTTTCCCAAAACAAGGACATGAATACTTGCCATCAATCTCAATAAGGTTTTGAAAACTAAAGAATTATAGCAAGTTGCTGAAGTTGCTATATAGAGGCTAAATCACATTCATTATTGCAAATTACCAATAAGACTATTTCAGCTACTTATTCTATGAAACTGAAATTCATGATGGACATAGTACATTGAGTCCACATAAAAAGTGTTTAAAAATACTTTTGCACTTACAGGTACCTCAGAATTTGGGGATTCATTTTAGGACAGATTGTTCTTGTTGTTCTACGCATATGGTATACTTCACTAAACCCAATCTGGAGTTATCAGATGTCCAACAAAGTGATACTGACATTAAGTGCCATAGCCACACTTGATCGTATTGGCACAGGTAA chr4 - 94230402 26104640 26104639 26105075 68125328 68125327 68125763 436 TTTGTTTGTAGGGAGCTTAGCGTCATACCAGGCTCCAAATGCTTCCATTAGACTGTTCATCTTGGCTGCTGGTGTTTCGTCCTCATTGCTGGTTCAAACAGTAACATTGTGGTCAGGAAACAGTTTACAAAGGT-------ATTTTTTTTATACTGATGG------AATTAT------------AAAAGACATCT-----------CTCTATCTTAAAACGTGTATT-----TATGGTTTTG-------------TTTTCTCC----CTCAGAA-------------------------------------------------------------------------------------------------------------------AACAAGATTGTTTTTTCCCCCCCTTTCAT--------------------------------------ACGTGTCAATGATCTAAAACTGATT-----CTTGCAGGTTCATCAGGATATGGGGCTTCATTCTAGGCAAGATGATGCTCCTTGTTCTTCGAATCTGGTATACATCACTGAACCCAGTGTGGAGCTCACAAGCTGCCAATACTGTCGTGCTGACAATTGGTTTAGTAGCAGCAGCGGAGAGAATTTATTCAGGTAA ............x...x....x..x.x...............:xxxx..x.....x.x:.::.x..xx:...x..x..x......:..x.:..x...:.x..:..x.x...........::x:...:.......-------..x...:x.:....x..:.------..x...------------..::..x.:..-----------:..:.xx...x.::x.x..::-----.....:....-------------....:...----.:..:..-------------------------------------------------------------------------------------------------------------------..:....:.:...:xx.:x.::x..::..--------------------------------------..:.:xx..xx:.:.....x.:x..-----...:.....x.x....:..x.....x......:....xx....x:.x..:x.......x..x..x........x.....:......:.x.....:.xx..:::xx....:.xx..x:.:......x.x:..x:x:....x:..x:x..xx.x...x::x....... 134M7D19M6D6M12D11M11D21M5D10M13D8M4D7M115D29M38D25M5D166M 295/436 67.7% 436/94230402 0.0% 216/436 49.5% 22886803 NA +10484 chr4 + 190214555 48994596 48994595 48994826 231 ATATATGTATTTTTAAATTCTAGATGGTGACTGCAGTAAACCTGAAGAAAAGAAGACTGGTGAGGTAGCCACGGGGATGGCCTCTAGACCCAACTGGCTGCTGGCAGGGGCTGCTTTTGGTAGCCTTGTGTTCCTCACCCACTGGGTTTTTGGAGAAGTCTCTCTTGTTTCCAGATGGGCAGTGAGTGGGCATCCACATCCAGGGCCAGATCCTAACCCATTTGGGTGAGT chr4 - 94230402 26106174 26106173 26106402 68124001 68124000 68124229 229 ATATTCCTATTCTTA--TTCTAGTTGAAGACGAGAGGAAACAAGGAGCAAACGCCACTGGTAATACAGTCAGGAAGGCTGTCTCGCAGCCTAATTGGCTTTTGTCAGGAATGGCTTTTGGCAGCCTCATGTTCCTCACCGTTTGGATATTTGGGGAGGTCTCGCTAATTTCTAGATGGGCAGTAAGTGGACATCCACATACGGGTCCAGATCCTAATCCATATGGGTAAGT ....x:x....:...--......x..:x...x:x..x....xx.:..x...x:xx......:.x::..:..x.::.::x.:...xx::..:..:.....x:..x....:::x........:.....::...........xx:...:.x.....:..:.....x..x:....:...........:.....:.........x.:..x...........:....x.....:... 15M2D214M 163/229 71.2% 229/94230402 0.0% 2/229 0.9% 22888422 NA +11209 chr4 + 190214555 49003705 49003704 49003994 290 CTGTCTGATTCTTTTCTCTCTCACAAACAGGAACAGCTTCAGCTGCGGGGCTCCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCATCCATGTGGCCCCAAACACTTGGACACCTTATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTAGAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGT chr4 - 94230402 26108621 26108620 26108907 68121496 68121495 68121782 287 CTGACTTGTTTTTCTTCTGCCCCTTCACAGGTATAGCATCTTCAGCTGGTCTCCTTTACTTACACACCTGGAGTGCTGCTGTTGCAGGCAATATTCTTGCTGTCTTTACTATGTGTGTGTGGCCCCAACTGGCTGGACGCTTTGTTGGTT---GTCTGCATCCTGGAAAAGCCATGAGTACAGCCATGTTCACCTACGTTCTTGAATTATTCTTCTGTGTATGGTGTACAGCTTATAAATTTGTACCTGGAGGAGTTTACGCTAGAGAAAGCTCCCATCTTCTTTTAGGT ...x..x:..:..:.:::x.:.x:xx.....x.:...x..xx.x..x..x.........:.:.....x...:xx........xx.x...x:.:.::.:..::........:::.x::...........x::x:.....:.:..:..:::.---.xx::x.:.....:...:......x:.:x......x.xx::..:x....x...x....:.......:x.....:.......x...:.....x..x.....x..:..............x..xx..x.x.....:... 150M3D137M 194/287 67.6% 287/94230402 0.0% 3/287 1.0% 22895084 NA +5026 chr4 + 190214555 49007189 49007188 49007342 154 CTCTTATAACAGGGACAATGATGTTAATTATCGGGCTGAATATGCTATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTTTTCAGAAAGAGTGAAAAATACATGAAACTTTGTAAGTATAGTTTTAC chr4 - 94230402 26112688 26112687 26112841 68117562 68117561 68117715 154 CTGTTTTTACAGGGTTTATTATGTTATGCATTGGGCTAGGCTTCCTAACAGGATCCAAGAAAGACCTGAACTCCATCTTTGAAGTGAAAAGCGACCAAAAGCCATTTTTTAAAAAGAGTACAGAATACATTAAGCTACGTAAGTATAATTTGAC ..x..x.x......x:x..x......xx:..:.....::::x.x...x:x..x:.:......:....x:...:xx.::..x..:::....:.::::xx..:x:::....:.:.......:x.:.......x..:..x:.........:...x.. 154M 96/154 62.3% 154/94230402 0.0% 0/154 0.0% 22894501 NA +5570 chr4 + 190214555 49017200 49017199 49017384 185 TTATTTTATTTATTTTAAAAAAACCCAATTATTTCT---TTTTTCTGTTT--AGTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTATGAGAGAAAACTGGGCAAAGTGGTAAGTAATTAAAAACCTTGAAATAG-AATTT-----TATATGGTATATATATGTGCATATA chr4 - 94230402 26113739 26113738 26113923 68116480 68116479 68116664 185 TTATTTC--CTGCTTTAAAAACAGCT-----TTTCTGTGTTTCTCTGTTTCGAGTGTTGTGGCTGTTTGTTGGTGCTGGCTTGCTAGGATTGGGTCTACGTTATAGAACTTATGAGAAGAAGTTGGGCCGAGGGGTGAGTAG-CATGTATCTGAAAATGGTAATTTTCAAATATACGGTG---AAATGTGCCTCTA ......:--:.::........x.x.:-----.....---...:.......--...x:........:.........:x..x...:.:.....:..x.....x:...:.:.:.......::..::.....x:..x...:....:-:.x:x.:..x:....:.-.....-----....:...:---.x......x.x.. 7M2D17M5D5M3I11M2I90M1D17M1I5M5I9M3D13M 129/174 74.1% 185/94230402 0.0% 22/174 12.6% 22903461 NA +6329 chr4 + 190214555 49028620 49028619 49028743 124 ATTCCTCAGGCACCAACCAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCTAGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACAGGTAAGTCTT chr4 - 94230402 26114544 26114543 26114667 68115736 68115735 68115859 124 ATTTTTGAGGTTCCAAAAAGAGATTTCTCTGCTATGATCTGGCCGTTTAGATTTGCATATGACAATGAAGGGTGGTCCAATTTGGAAGGATCTGCTACTTTACTTAATCAGACAGGTAACTTTT ...::.x...:x....xx.:...xx........::x........x..:..:....x.....................:.:.:.:...:....x...xx::.:..:...x.:........x.:.. 124M 91/124 73.4% 124/94230402 0.0% 0/124 0.0% 22914076 NA +9105 chr4 + 190214555 49032546 49032545 49032721 176 CTCTTTTCAT--TCCAATACAGGATTATGGCTTTGTCAAGATACCCAATTGTGAAATCTGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTTAACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACACACTTTGGGAACCACGAGTGGGT chr4 - 94230402 26117098 26117097 26117275 68113128 68113127 68113305 178 CTCTTTCCATCTTTTCATGTAGGATTATGGCACTGTCAAGATATCCAATTGTAAAATCTACTCATCACCTTCTCCCTTCTCCAGAGGGAGAAATTGCACCTGCCATCTCCATGACTGTCAACTTCACGGGGAGACTGATTGATTTTGTTGTTGCTCACTTCGGAAATGAAGAGTGTGT ......:...--.::x..::...........x:..........:........:......:xx...........:..x..x........x..:..:.....x......x.xx....:..:...x.:x....x.::...:.x........:..x:.x.....:..:..:x.x.....x.. 10M2I166M 133/176 75.6% 178/94230402 0.0% 2/176 1.1% 22915448 NA +9115 chr4 + 190214555 49038020 49038019 49038189 170 TTTTTACATTTTTTAGAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTTTCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACTGAACATGGCAATGTGAAGGTAACATAA chr4 - 94230402 26119345 26119344 26119514 68110889 68110888 68111058 170 TTCCTACTTCTTTCAGAGAGGACTTGGACAGAAAACTTCAGGCTATAGCTGTTTCAAAGTTGTTGAAGACAAGCTCTAAGCAAGTTGTATTTCTAGGATACGTCACTTCAGCTCCTGGATCCAGAGATTATACTGAATTAATAGAAAATGGAAATGTCCAGGTAATGTAA ..::...x.:...:.....x...:.x.....:.....x........x...........::.::....:.xx........x.....x:.......:.....::..........x.....x............x:xx.::.x.:x...x....x.....xx......::... 170M 129/170 75.9% 170/94230402 0.0% 0/170 0.0% 22918675 NA +3000 chr4 + 190214555 49049515 49049514 49049550 36 CACTCTAAAAAAAAAAACAGCAACAACAACAACAAC chr4 - 94230402 38434053 38434052 38434088 55796315 55796314 55796350 36 CACTCCAAAAAAAAAAACAACAGCAACAACAACAAC .....:.............:..:............. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 10615462 NA +8384 chr4 + 190214555 49050671 49050670 49050855 185 AACCATTTCTGTTTCTGCTACAGGTTGGGTTATGCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAACCAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAGAAAATTCATTTTAATCCCAGGTGAGT chr4 - 94230402 26121185 26121184 26121367 68109036 68109035 68109218 183 AACTCTTCTTGTATCTG--ATAGGTTGGGCTATGCCCGCATATCTCACGCTGGTTTAAGTGACTCAGAAGTCCAAATGGCCAAATTTAGAATCCCAGATGACTTAGATAACTATGTTGACAATGACAGAATTGTCACTGATCCCAGCCAAGTTCCTGAGGATGTCCATTTCAATCCCAGGTCAGT ...:x..::...x....--.:........:.....xx.x..x..:..:....:x:.:.....:......:.:..:.....x........:.....x......::x:x...:...:xx.....:x.x.:.:.x....:x..:.x...xx.....:.....:.x:.:.....:..........x... 17M2D166M 131/183 71.6% 183/94230402 0.0% 2/183 1.1% 22929486 NA +3441 chr4 + 190214555 49051652 49051651 49051725 74 CTGCAACCTCTGCCTCCTGGGTTAAAGCAATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.......x...::x...x.xx.x........::::.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 30854526 NA +3132 chr4 + 190214555 49085913 49085912 49085960 48 AAAACAAAAACAAAAACAAAAAAACAAAAAACAGCAACAAAAAACCCT chr4 - 94230402 68691692 68691691 68691739 25538664 25538663 25538711 48 AGAAAATAGACAAAAGCAAACAAACAAACAACAACAACAAAAAACCCT .:..x.x.:......:....x.......x....:.............. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -19605779 -74624623 +3469 chr4 + 190214555 49157785 49157784 49157857 73 CTGCAGCCTCTGCCTCCCAGGTTCAAGTGATTTTCCTGCCTCAGCCTCTGGAGTAGCTGGAAGTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:xx:x..:.::..........x..:x.xx.x........:.x:...........x....x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 30960659 NA +3326 chr4 + 190214555 49244994 49244993 49245098 105 TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATCTCCAAAATATAATTTGCAGTGAAATAAATGAAAGCA chr4 - 94230402 37363040 37363039 37363140 56867263 56867262 56867363 101 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATA----TTAAGCTGGAATAACCAGAAGCA .:.:..:...:x.:......:..::.:.x......xx:.:.....:.:...:...x:.:.:.:..x..x.x:......----..:x:x..:.....x:::..... 78M4D23M 65/101 64.4% 101/94230402 0.0% 4/101 4.0% 11881954 NA +3317 chr4 + 190214555 49273664 49273663 49273837 174 ACCTCAGCGACA---------AGAGCGAAACTCCTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----CAAAAAAAAAAAAAAAA---CAAGAAAG--------------AAAAGAAGTCATAGATGACACAAA--CAAATGGAAATGCATCCCCATGCTCATGGATGGGTAGAACCAATATTGTGAAAATTACCA chr4 - 94230402 4077698 4077697 4077904 90152499 90152498 90152705 207 ACCTCAGCAAAATAACAGCTCACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCAAGAAGAGGGAACAGAGGCTGGGAAAACCTACTTGGGGGGCAAAAGGAATCAGGGAAAGTAAAAAGGGAAATGAAGATGTGTTTAAATATATATAATATGGCAGGAGTGATGTTAGAAAATGTCCCA ........:.x.---------.x..:....:.:.....:.............x.::...::.:....::..:..-----...:..:.:::..x.:.---:::....:--------------.....:.:...x:..x:::.x...--x.....:.:...::.::xx..::x:..::xxx..:..:.x::..:..:x:...xx.x... 12M9I53M5I17M3I8M14I24M2I60M 108/174 62.1% 207/94230402 0.0% 33/174 19.0% 45195966 NA +3094 chr4 + 190214555 49273687 49273686 49273791 105 CCTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAGTCATAGATGACACAAACAAAT---GGAAATGCA chr4 - 94230402 56708871 56708870 56708978 37521425 37521424 37521532 108 CTTTGGGAAAAAAAAAAAAGGGGGGGGGGAAAAAAAGGAAATCAAGAAAATAACACATAGGAGGGAGAGGGGAAGTATAAAAGGACAAGAAAGAATCAGATAAATGCA .:..xx.............::::::::::.......::...x...:....x..x.x.x.x:..::...:::.....xxx.:.x....x:..x:...---:x....... 96M3I9M 66/105 62.9% 108/94230402 0.0% 3/105 2.9% -7435184 -86795218 +3213 chr4 + 190214555 49273693 49273692 49273771 79 GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAGTCATAGATGA chr4 - 94230402 87912486 87912485 87912564 6317839 6317838 6317917 79 GAAATAATGATAATAATAAAAAGCAACTAAAGAAAACATTGAAAAAAAAAAGACATGAAACTAAAGAAGAAATAGACAA ....x..x:.x..x..x.....:x..xx...:......xx:..........:...x....xx.......xx.....::. 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% -38638793 -55591609 +3141 chr4 + 190214555 49273714 49273713 49273762 49 AAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAGT chr4 - 94230402 54229013 54229012 54229061 40001342 40001341 40001390 49 AAAAAAACAAACAAACAAAAAAAAACAAAAAGCAAGAAACAACCGAAGT .......x...x.............x.....:.......x..xx..... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% -4955299 -89275103 +3223 chr4 + 190214555 49284272 49284271 49284335 64 GAAAGAGAGAGGGCAGAAGGAGTAAGAGAGTAATAGGAGGAAGGAAGGAAGGAAGGAAAGAAGG chr4 - 94230402 36691893 36691892 36691956 57538447 57538446 57538510 64 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAG .:.:...:.....x.x..:.::x:...:.:...:...........:...:x....:.:.:..:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 12592379 NA +3009 chr4 + 190214555 49290287 49290286 49290350 64 GAAAGAGAGAGGGCAGAAGGAGTAAGAGAGAAATAGGAGGAAGGAAGGAAGGAAGGAAAGAAGG chr4 - 94230402 36691893 36691892 36691956 57538447 57538446 57538510 64 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAG .:.:...:.....x.x..:.::x:...:.:x..:...........:...:x....:.:.:..:. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 12598394 NA +3943 chr4 + 190214555 49497362 49497361 49497422 61 CTCCTGGGTTCAAGTGATTCTCCTGTCTCGGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.............x...x.xx.x...:....::...........:......x...... 61M 50/61 82.0% 61/94230402 0.0% 0/61 0.0% 31300223 NA +3035 chr4 + 190214555 49508789 49508788 49508839 51 TTGAGACTTTTTTTTTGGGGGGGGGGGGGCAGGTGCAAAATGGAAAACAAA chr4 - 94230402 30912787 30912786 30912837 63317566 63317565 63317616 51 TTTAGATTTTTTTTTTGGGGGGGGGGGGGGAGGGGTGGGAAGGAAGAAAAA ..x...:......................x...x.::::.x....:.x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 18596002 NA +3390 chr4 + 190214555 49518107 49518106 49518186 80 ATCAGTGGGGACCCAGGCCCGGCTTCTCCGAGGTGCTGATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 5683003 5683002 5683082 88547321 88547320 88547400 80 ACCGGTGGGAAGCAAAGAGGGGAGGTTTTGGGGGGGTGATATACACACACATACATATATATGATTTTTTTTTTTTTTTT .:.:.....:.x.x.:.xxx..xxx:.::.:..x.x.......:.:.:.:...:........:x................ 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 43835104 NA +3152 chr4 + 190214555 49518130 49518129 49518210 81 TTCTCCGAGGTGCTGATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGCCACAG chr4 - 94230402 71841432 71841431 71841511 22388892 22388891 22388971 80 TTTTTTAACGTTCTGA-ATGTTTATACAAATCCAATCACATTTCTTTCTTCTTTTTCTCTTTTTTTTTCTCTCTGTCTCAG ..:.:::.x..x....-..:.x....:.x..x:.xx:.:....:...:..:.....:.:.........:.:....:.x... 16M1D64M 55/80 68.8% 80/94230402 0.0% 1/80 1.2% -22323302 -71907100 +3129 chr4 + 190214555 49518132 49518131 49518204 73 CTCCGAGGTG----CTGATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTG chr4 - 94230402 92735332 92735331 92735408 1494995 1494994 1495071 77 CTCCAAAGTAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTG ....:.:..:----..x::....x.....:...:..:.:....x.x.x......:.x.........:.x...::... 10M4I63M 53/73 72.6% 77/94230402 0.0% 4/73 5.5% -43217200 -51013202 +3165 chr4 + 190214555 49518140 49518139 49518263 124 TGCTGATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT---------------TTCTGCCACAGGTGACTCACCTCTCCTCCCTTAAATCTCGCCTTCCCCTC-ATGGGCTTTCTGGC chr4 - 94230402 92735348 92735347 92735485 1494918 1494917 1495055 138 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTGGCTTCTGCCAC--GTCCATCACTGCTTTCTCCGGAGTGCTCACACTGAATTCAATGGGGCTTTTGGC ...xx..x.....:...:..:.:........x......:.x.........:.x...:::.---------------.........--..xxx....:x..::::..xx.:xx...:.x:.xxx:..-.....x:..:.... 60M15I9M2D39M1I14M 83/122 68.0% 138/94230402 0.0% 18/122 14.8% -43217208 -51013194 +3179 chr4 + 190214555 49518144 49518143 49518207 64 GATATATATATATATATATATATATATTTTTTTTTTTT-TTTTTTTTTTTTTTTTTTTTCTGCCA chr4 - 94230402 4200276 4200275 4200340 90030063 90030062 90030127 65 GATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGTTATCTGTCA .............:.:.:..............::...:-xx.......x...:xx..x....:.. 38M1I26M 50/64 78.1% 65/94230402 0.0% 1/64 1.6% 45317868 NA +3039 chr4 + 190214555 49518145 49518144 49518197 53 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:......x.x......:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -43217206 -51013196 +3217 chr4 + 190214555 49518146 49518145 49518193 48 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735403 1495000 1494999 1495047 48 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....:...:..:.:...............:.x.........:.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -43217210 -51013192 +3053 chr4 + 190214555 51833998 51833997 51834104 107 GTATTTTAGGTTTTGGTGTTGAGCCATTTGTTTGTTAGGAGT-CTTTCTCTCT-----------CTCTCTCTCTCTCTCTCTC------TCTCTCTCTCTCTCTCTCTTTTCTTTTCTTCTTTCT chr4 - 94230402 47552607 47552606 47552730 46677673 46677672 46677796 124 GTACTCTAGGGCTCTGCACTGA-TCATTCATATATAAGGATTACTTTCTTTCTGATGCACATTTCTATCTCTAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTACT ...:.:....x:.:x.:::...-:....::.x.:.x....x.-......:...-----------..x.....xx:.:...::.------.:x..............:....:....:..:..x.. 22M1D19M1I10M11I19M6I36M 75/106 70.8% 124/94230402 0.0% 19/106 17.9% 4281391 NA +3096 chr4 + 190214555 51834054 51834053 51834102 49 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTTTTCTTCTTT chr4 - 94230402 28071375 28071374 28071423 66158980 66158979 66159028 49 CTCTATTTCTGCCTCATTTCCTCTCTCTCTCTCTTTTCTTTTTTTCCTT ....x.:...x:...x:.::......................:...:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 23762679 NA +3177 chr4 + 190214555 51834067 51834066 51834128 62 TCTCTCTCTCTCTCTCTCTCTTTTCTTTTCTTCTTTCTTTTTTTTTTCTTTTTTTTTTTTTT chr4 - 94230402 9693769 9693768 9693830 84536573 84536572 84536634 62 TCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTT ...::.....:..:..:..:.......:x....:.x:....x..x..:....:...:::... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 42140298 NA +3038 chr4 + 190214555 51834072 51834071 51834142 71 CTCTCTCTCTCTCTCTTTTCTTTTCTTCTTTCTTTTTTTTTTCTTTTTTTTTTTTTTGCTGTAAATCTGTT chr4 - 94230402 36600617 36600616 36600681 57629722 57629721 57629786 65 CTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCC------TTTTCATTTCTTTTTTATGGGTATTAATTTGCT ..:.:.::..........:.:.........:.------.....x...:......x.x.x.:.x...:..:. 32M6D33M 49/65 75.4% 65/94230402 0.0% 6/65 9.2% 15233455 NA +3302 chr4 + 190214555 51839120 51839119 51839301 182 AGAGAAGGAGGGAATGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAGAAGGAAGGAAGGAAGAAAGGAGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAAGAAAGAAAGAAAGAAAAGAAGGAAAGGAAGAAAGAAAGAAAGAAACTAAAGCCCAACACAGGAAT--ATTAAAAACATGGA chr4 - 94230402 42358061 42358060 42358237 51872166 51872165 51872342 177 AGAAATGGACTGAGTGGATGGGGAAGGTAC-------AGGGAGGAGGAGGAAGGAAGTTACCACGAAACACAGCTGGACAAAAGCAGTTAAGCTGGAGGCACCAAAAGAAAAAACACAAATTTTGGAAAGAAAAAAGAATACATAAAAACAAAGCCAAATACTGTCATAAATCAGAGACCTGGA ...:.x...xx..:..::x.:..:.:.x.x-------...:.....:..........xx.xx.x.:.:x.x::xx.:.x:..:.x..xx.:.xx...:.x.xx:.......:..x:x...xxxx.:..:...:......x:x.x:...x:......x..:..x.xx..--..:.:.:..x.... 30M7D131M2I14M 105/175 60.0% 177/94230402 0.0% 9/175 5.1% 9481059 NA +3120 chr4 + 190214555 51839176 51839175 51839243 68 GGAAGAA----AGGAGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAAGAAAGAAAGAAAGAAAAGAAG chr4 - 94230402 87012015 87012014 87012086 7218317 7218316 7218388 72 GGAAAAACCTTAGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG ....:..----...::.::...x.::..:....:..::..::..::......:.x:.......:....:... 7M4I61M 47/68 69.1% 72/94230402 0.0% 4/68 5.9% -35172839 -59057563 +3161 chr4 + 190214555 51839182 51839181 51839286 105 AAGGAGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAAGAAAGAAAGAAAGAAAAGAAGGAAAGGAAGAAAGAAAGAAAGAAACTAAAGCCCAACACAGGAA chr4 - 94230402 17708401 17708400 17708498 76521905 76521904 76522002 98 AAGCAGAGAGAGTGATAAGCAGAACAAAGGCAGGAAG-------AGAGAGACCAAGAACAAGTAAGGTAAGAAGGGGAGAAAGAAAGGACAACCCAGCATGGGAA ...x...::..:x..x:::x:...x:....x:.....-------...:...xx:.:..x...x..:.x.....:.::.........xx.x.:....:..::.... 37M7D61M 64/98 65.3% 98/94230402 0.0% 7/98 7.1% 34130781 NA +3103 chr4 + 190214555 51839223 51839222 51839280 58 GAAAGAAAGAAAGAAAAGAAGGAAAGGAAGAAAGAAAGAAAGAAACTAAAGCCCAACA chr4 - 94230402 31023812 31023811 31023869 63206534 63206533 63206591 58 GAAAGAAAACAAGGAGAGAAGGAAAAAAAAAATCAACAAAAAAAACCAAAGCTAAACA ........:x...:.:.........::..:..xx..x:...:....:.....:x.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 20815411 NA +8140 chr4 + 190214555 51843067 51843066 51843515 449 GACGCAGCAGGGCGGC----CCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGATGGGCGGGCTGGGAGTGCCCGGCGGCGGGTCCTCAGCTTCGAGCCGAGGTGCAGTGAGCTGGTGGGGGGACCGCGAGGCGAGCGCGGGAGCCTGGGCGG--CGAGCCGGGTGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGCTGTCAGTGAGTAGCAGAGAGCCAGCCAGCGGGCCGGGGCCGGGCGGCTGCCAAACTCGCCACTCGGCTC---CCGCAGTCCCCGCCCCACGCCTCGGGTCCCGAAACGCGCCGGGAGCCCCTGCCTGGGAACCACCC--CTTCCCCTCCCGGGGCCGGGGCGG-GCGGTGACGCTGCG------GGCGGCGTGGGGCGGGGGCGGGCGTGGGGGGAAGGGACCGGCCTGCGGGGAGGGCGGAGGTGAGGGGGGTGGGGACTGGCT chr4 - 94230402 26129044 26129043 26129433 68100970 68100969 68101359 390 GACGCAATAGGAGAGCAGAATCCCGAGCAG--GCCGAGCCAATGG-----GTGCCGCCGGTGGGC--GGAGCGGTGGGCGGCCGTGCCTGGGCTCTG------------------TGATTGGGAGA----GGGGCA---GCGGGAGCCGGGCCGGGCAGGGCCGTGTGTGCGCCGCACGAAAATGCACTCGGATGCCGCCGCTGTCAGTGAGTAGCGGCGGGC-------CGCGCCG---------------------CGCTCCTTTGCCCGCTCCGCAG----CGGCCCTGGCCT-GGCT-----AGCCCGCCGCCAGGCCCTGCC---AACCCGCCCGGCTCCTCCGCACCTGGCTGGGGCGGCGCGGCCGTGCGGCGCCTCTCGTTcgcgggggacggcgccgggccagcgggcgcggagccggc--gcggggagggcggcgggcaggccgggggcggcgggTT ......::...:x:..----:..:....x.--.::x.........-----.:.xx::x..:....--....:.x:x......x.xx...x:...::.------------------..:.x...:..----.:...:---.........x..x...--x.:....x.....x..:..x:......................................:.x.:..-------..x....---------------------...:x..:x..:.---......----..x...xx....-..x.-----.:.x.....xx..x.......---:.x..:...--..:.:..x.x.xx...:.......-....:x::..x...------.x:x...x...:...x.x.....xx.x...x:x..::.....--.............x..xx...xx..x..x.:.x..:. 16M4I10M2D13M5D15M2D30M18D11M4D6M3D16M2I66M7D7M21D13M3I6M4D12M1D4M5D21M3D9M2I24M1I14M6I42M2D37M 271/372 72.8% 390/94230402 0.0% 95/372 25.5% 25714023 NA +3051 chr4 + 190214555 51859635 51859634 51859683 49 AAGCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAGACAAGTTTATGCC chr4 - 94230402 49791652 49791651 49791700 44438703 44438702 44438751 49 AGGAAAGAAGGAAAAAAAAAAAAAAACAAAACCCACACAAATCCATGCC .:.x..:..::...............x........x....:.::..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 2067983 NA +7089 chr4 + 190214555 51863395 51863394 51863511 117 TGGAAATAAATGACGCTGACATTTTTCCTTTTTCTTTTCAAGATTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTGGTAA chr4 - 94230402 26139089 26139088 26139205 68091198 68091197 68091314 117 TGGAAACCAAGCAGTTGAAAACTTTTCTTTTTCCCCCTCTAGATTTTCAACTGAATTCTCACCTATCAACACTGGCAAATATTCACAAGATTTACCACACCCTCAATAGGCTGGTAA ......:x..xx.xx:x:.x.:.....:....:.:::..x.........:.....:.....:..x....................:.....:...........:....:........ 117M 92/117 78.6% 117/94230402 0.0% 0/117 0.0% 25724306 NA +4012 chr4 + 190214555 51863660 51863659 51863715 56 TTTCTTTCAGAACCTAACAGAAGACATTGGCCAAGACGATCACCAAACAGGTATCT chr4 - 94230402 26139982 26139981 26140037 68090366 68090365 68090421 56 TCTCTTGCAGAATCTGACTGAGGACGTTGGCCAAGACGATCACCAGACAGGTATTT .:....x.....:..:..x..:...:...................:........:. 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 25723678 NA +10385 chr4 + 190214555 51874243 51874242 51874390 148 TTTTGTGCT----CTTTGAATTTGTTTTGTAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGGTATG chr4 - 94230402 26147332 26147331 26147483 68082920 68082919 68083071 152 TCTTGTACTGGTGTTTTTAATTCCCTCTGTAGGAAGTCTCCGGTCTTGCAGTTCATCAGACTGCTTTAGTAAAGTGATGCCTCCAAGGAAAAAGAGGAGACCTGCAGCAGGAGATGATTTATCTGCTAAGAAAAGTAGACATGATGGGTACG .:....:..----:...x....:x:.:............x..............x.............:............x..............:........xx.x.................:..................:....:. 9M4I139M 129/148 87.2% 152/94230402 0.0% 4/148 2.7% 25726911 NA +8062 chr4 + 190214555 51877756 51877755 51877862 107 TTTCCAGCATGTATAGAAAATATGATTCGACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAATATGCAGGTAGGTAT chr4 - 94230402 26155190 26155189 26155296 68075107 68075106 68075213 107 TTTTAAGAATGTATAGAAAATATGATTCGACTAGAATAAAAGCAGAAGAGGAAGTCTTTTCAAGTAAAAGATGCTTAGAATGGTTCTATGAATATGCAGGTTAGTGT ...:x..x................................::.x.....:....:...............:.....:........................x:..:. 107M 94/107 87.9% 107/94230402 0.0% 0/107 0.0% 25722566 NA +6089 chr4 + 190214555 51886561 51886560 51886644 84 TTCACAGGAACTGATGATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTGAAGACATTGGTGTTGAACCAGAAAACGTGAGT chr4 - 94230402 26157539 26157538 26157622 68072781 68072780 68072864 84 TTTGCAGGCACCGATGACATTGTAGGGCCAGAAGGTATGGAGAAATTTTGTGAAGACATTGGAGTTGAACCAGAAAATGTAAGT ..::....x..:.....::.......x..x.....:..........................x..............:..:... 84M 72/84 85.7% 84/94230402 0.0% 0/84 0.0% 25729022 NA +8006 chr4 + 190214555 51891689 51891688 51891860 172 CAGATCTATTTGTTTTTTCTTTTTAATTTGTGTAATATATTTTTTTTTAATTGTGTATTTTTTTTTAACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACATGGGTTATTTTACTCTACAGGAGTGGTTAAAAGGAATGACTTCTCTCCAGTAAGTCCT chr4 - 94230402 26159151 26159150 26159305 68071098 68071097 68071252 155 CAGATATTTTTGTTGCTTCTCTTCAGCTTTC-------ACTTTTTTTT----------CCCTCTGAAACAGGTAGTAATGCTTGTATTAGCATGGAAGTTGGATGCACAAAACATGGGCTACTTTACATTACAAGAATGGTTAAAAGGAATGACATCACTACAGTAAGTGCT .....x.x......x:....:..:.::..x:-------.:........----------:::.:.xx..........x........x:....x.....:....................:..:.....x:....:..:.................x..x..x........x.. 31M7D10M10D114M 123/155 79.4% 155/94230402 0.0% 17/155 11.0% 25732538 NA +9726 chr4 + 190214555 51899231 51899230 51899392 162 GAACTCAGGTCATAATTTGCCTTTATTCTGTTTTTCTAGATGTGATACAACAGAAAAACTCAGAAATACTTTGGATTACTTAAGATCATTCTTAAATGATTCTACAAACTTTAAACTTATTTACAGATATGCGTTTGACTTTGCACGGGTGAGTTCTCTGGA chr4 - 94230402 26160150 26160149 26160311 68070092 68070091 68070253 162 GAATTTAGATCATGAATTCACTCTTTGCTTTTCTTCCAGATGTGATACTACAGAAAAATTGAGAAATTCCCTGGATTGCTTGAGATCTTTATTAAATGAGCCTACCAATTTTAAACTTATTTATAGATATGCATTTGACTTTGCACGGGTGAGTACTGCAGA ...:.:..:....:.x..xx..:.x.x..x..:...:...........x.........:.x......x.::......:...:.....x..x........x:....x..:..............:........:.....................x..x::.. 162M 129/162 79.6% 162/94230402 0.0% 0/162 0.0% 25739081 NA +3172 chr4 + 190214555 51909110 51909109 51909166 57 AGTCTGTCCAGGTCTTTTGTATCTTTTTTTTCTTTTTTGTCACCTTAGTGTATGTCC chr4 - 94230402 83257192 83257191 83257248 10973155 10973154 10973211 57 AGTCTTTCCAGGCCTTTTTTATTTTCTTCTTCTTTTTTTTTCCCCCAGTATATTTTC .....x......:.....x...:..:..:.........x.:x..::...:...x.:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -31348082 -62882320 +8274 chr4 + 190214555 51911052 51911051 51911177 126 TTTTTGTTTGTTAAACAGGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTTTTCCAGTTTTTCACCAATTCTTAGAGGTA chr4 - 94230402 26162480 26162479 26162605 68067798 68067797 68067923 126 TTTTTCCATTTCATCCAGGAAAAGGACCAGCGCAGCCTAGACATAAATACTGCCAAGTGTATGTTGGGCCTTCTTCTAGGAAAAACATGGTCTCTTTTTCCAGTATTTCATCAATTTCTAGAGGTA .....x:x.x.:.xx................................:...........:........x..x:.x:.........:x...:.:...........x.....:.....::........ 126M 104/126 82.5% 126/94230402 0.0% 0/126 0.0% 25748572 NA +3109 chr4 + 190214555 51912393 51912392 51912477 85 GCTTTGTTCTCTCTCTTACATTAGTTTGCATTTTTCTTTAAAAAAGACAGTATTCCTCTCATT--TCAGCTTTTCTTGTGTTTGCAT chr4 - 94230402 85592703 85592702 85592789 8637614 8637613 8637700 87 GCTTAATTCTCTCTCCTACATTAATTTGTGATTTTTTTCTTAAAAGATTTCTTTCTTTTCACTTATCACTTTTTTTTTTTTCCCCAT ....x:.........:.......:....::x....:..:xx......:xx:x...:.:...:.--...x:....:..x.x.::x... 63M2I22M 58/85 68.2% 87/94230402 0.0% 2/85 2.4% -33680310 -60550092 +47161 chr4 + 190214555 51913252 51913251 51914845 1594 TAAGTGTCAGTAATTCATATTACTTTTCCCTCCATCAGCAATCAAAATACAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGCAACTATGATGAAGATGGAGCATGTAAGTACTGCCGCTACCATTCTGCCATTCGTGTACATTTCTATATCATCCTCATTGGGAAAAGCCTCAGCTACATTACTATTATTATTATTGTTATTATTATTATTATTACTACTGTTTCTCTCTTTCTCTCCAGGGCCAGTTTTGTTGGACGAGTTTGTGGAGTGGTATAAAGACAAACAGATGTCCTAGGACTT----TATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTTCTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGATTATGTGTATATTGCTGTTTAAATTTTGTATATGTGTATAAAAGGAAAAAGGTTCACCTAGAGATTATTTCTG-AAAAATGTATTGTAAAAATAATTTTGTGGC--ATTTCTAGTCCCT---------TTTTTTGAA--TGAACCAATTATACTTT--ATTTGGTCTCCTATGTAGCATTTCAGAAAACAAGA---------GAAAACTGTTACCATGAACAAACATTGCCAGAATTAACCTTACTGTTTAAGAGGCCAACTTCTGGAAGGAGGTAGGA-GTCATAACTTT-TTAG-AGGCATATGCCAAA-------TATCATTTGGTATACTTAACAATATTAGTGTTTTAA----------AATGATGAGTTATAATTATTTGAACA-TATAGATATGTAACATGCCACAAATCATTTCTACCATGCAAGGTGTATAAGTTGTTTATTTTTTAGTGTTAAAACTATAATAGCTTGAATATAGGTACCAATGAACAAATTCAAATTGCACCTCTTTTCTTAAAAGAATGGGATTTAAACTCTTATAAACATTCTTTAACTTTTTTGTTTGTTTGTTCTCTTTTTTTCCTTTTGCATTCTTCTAGCCAGTGATTGATCTGCTAATGCTTTCTTTGCCACTCTA-AGTAAAATTTATTTCACCTCCTCAATGAAAACCTCATGGTTTTGCTGGCTGTTTATAACTGCATCGCACTTCTAG-----------TTGTGGCTTGAATTTTC----------AGTTAAGCTTT--CATGGTATGTAATTTTCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAGCTGTTTTGTTTTCCTTGTTTGTTTGTTTCATGCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAG-AAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTG--TCCTAGAGGGGCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTTGTGGATGAGGAAACAAGAATAAACAGAATGGTATTTTTAGGTTTGTATTTTATGTCTTTTTTTTTTTTTTTTTTTGCC chr4 - 94230402 26163514 26163513 26165051 68065352 68065351 68066889 1538 TATGTTTCAGTAACTTCTGTT--TCTTGCCTCAAGCAGCAATCAAAATACAAAGTTATCAATAAGGACCAATGGTGTAACGTTCTTGAATTCAGCAGAACAATCAACCTTGACCTCAGTAATTATGATGAAGATGGAGCCTGTAAGTACTACCAT----ATGTTGGTGTTTGAAAATAATT-TATTTC-----------------TCTGAGCTTAATCATT--TGGTGCTCTTTTATGAAATTTTGTAA--AATACAGTTATTTGATCTCTCTACAGGGCCAGTATTGTTGGATGAGTTTGTGGAATGGTATAAAGGAAAACAAATGACGTAGGAGTTCAACTATGCACAGCCACTCAAGAGTCACTGTTACCACAGTTATGTCAACCATTAGCCATAAACTGCTGTTTGTATCGAAGTGCATGCTGCTTTTCTTGCACTGCGTCCCTTTTGCAGGGAACTTTTGGTGTTTGCCATTTAACAAGCTAGCTATGCTTGCTGTGTAGCATTGTTCTCCTTGAAGGCTGCTTTGCATTTTGTATTTACACTACAAATTGGTGAACTTGCCAGCGTCTTCACTGTGATTATGTGTATATTGCTGTCAAAATTTTGTATATGTGTATAAA---AAAAAGCTTCAACTAGGGATTATTTCTGCAGAAATGTATTGTTAAAATAATTTTGTGGCATATTTCTAGTCATCACTTACATGTTTGTTGAAACTTCAGTTATTTTGCTTTTCTTTTGGTCTCAAACGTAGCATTTCAGAAAATGAACAGACTGCTTGGACATAGTTACGGTGAAGAACTATTGTCAGTTTTAATGTTACTATCTGAGATGCCAATTTGTGAGGGGAGAAGAGACGAAGTGACTTTCTTAGTGGGAATCCGCCAAACTTGACCTATTGCTTAATAGGAGTGA-AGCATCGATGTCTTAATAACAACAACAAAAATCATATATAAATATTAAAACACTGTAGTAGTTGTACATGCCACAGTTTATTT---CCATTTGAAG---AAAAAGTACTGACTTTTTAATGTTAAAACTGCAGTGG--TCGTTACAGGTACAATTGAACAAATTAAA---GTACCTTTT------AAAAAATGGGTGTTAGACTTTTGTAAATTGCCTTTG------------GCACACTCCTTTTATTTTTTGTTGTACC------GAGAGTGTTTGG-------------ACTTTGTTGCAATATAGTGAAACTTA----AAGTTCTCGCTAAGAA--TAGTGGT----CTGGGGAATAAAATCTG---CTCACCTCTAGCACATAGGTAATAGAGATTTCTCTTTTCTGATTTGTAACGTTGGTCTTTCACATGGTCTCTAACTTT--ATGTTTCTGAGTAATTAAACATATTGTCA--AAGCGTTGCTTTTTCTTTCACGCTGG---------GGATTGGAATTCCCTAGCAGGGTGTCCATTGCAGGCAATGGGCACGTTAAACACCAGTATTAAATGA--CTACTTTTTATTAGGGACCGCTTCCTA-----------CTTCACTAATTTCTTTATCTGTGTAGGACAGTCCTAGTGATTACCTT--------GGGAAAAATGAGTGAGT-GAGTGGGAT-----GATGCTTAATTTCTGTATTTTTGTTGCATTGTCTTTGCC ..x..x.......:.:x.:..--.:..x....x.x.......................:.....:.....:.....:..:..:..x..:..:...........:..:...........:..:.................x..........:..::----..x:..x::..:.x:x.:.x..-...x..-----------------:..x....xx..:.:.--.:x.::.x..x.xxxx.x.x..:.x.--.x...x...x:.:xx.:.....x..........x........:...........:..........:x.....:...x.x.....x..----......:...x:.xx:.....................x.....x..............:.............:...:...........:..........:x.......:.......xx.x...........:...x..:x:..:....x............:...........:.x...............x.................:.........:......:....:...........................:x......................---......x....x....:...........-.:...........x................--..........x::---------...x.....--.xx.x:x...x.:....--x.........xx.:................::.:x---------.:.x.:x.....x:....x..x:....:...xx....:x.....:.:.:...x.....:..x..:::....:x::..-.xx:.:.....-....-:..x..x:......-------...:::..::..x:xx.:.-.::..:::...:....----------..x:..x.xx.....x....x:....-.:...xx:.xxx..........:x.:....---....x::.:.---.x..:x.::.x.:......:..........::.:.:.--.x:x..:......x.x..........x..---.:....:..------...:......xx...:...:..:....:xx:....:------------.:x:::..::...x...::.x...:.::------.xx....x...:-------------x.....:::.xx..-...:...:...----.xx.:...:x.:.:..--.x:....----....xx:x.x.x.x...---.x...:.....-----------.x.x.::..xxx.....----------x...::x....--......x.x...:...--.xx:..:....x..x:..:....:.:.x.--:..x.:..:...x.:..:.x:.:.x.---------x.x.x..xx..:...:....x:...............:...:..x.-x..x......:...:.::x.--.:.x.x:x.::....:x.:.--.....-----------:....:..x:.xxx....:...::..:.x:.:xx...:x....::..--------:.....x.x..:.:.::-..:...x..-----.:.x:x..x...x...x.....x..x:x..x.:...... 21M2D132M4D22M1D6M17D16M2D26M2D87M4I283M3D28M1I30M2I13M9I9M2I17M2I35M9I77M1I11M1I4M1I14M7I19M1D16M10I26M1I30M3D10M3D37M2D29M3D9M6D36M12D28M6D12M13D14M1I11M4D16M2D7M4D17M3D11M11I17M10I11M2I16M2D29M2D26M9D46M1I20M2D20M2I5M11D47M8D17M1D9M5D39M 1069/1461 73.2% 1538/94230402 0.0% 210/1461 14.4% 25749738 NA +15724 chr4 + 190214555 51916369 51916368 51916895 527 GATTTATTTTCTCTCTCAGTCTCCATTTTAACAG---------TGCTTTTGAAGTTTATACAGAAAGCTTTAAAAGTTAGTTTGTGCCCTTGGTTTTTATTCTTAAAACTGCTAAAATACCTCT--GTAAGCCTTATCCTTTATTCTTTCATATGTTGTATAATAAATGTATAGATTTCATTGACCAACTAAAATGTTGGGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTTTTT------------------------------------------------------TCATAAAATAATTTCTATTGGGGGTTACTGTTCAATGACAGCAGGTAACCTATAACTGTGAATGCTTCGTGTCGTCAGTATTT--GCATTACATTCATAAAAGTGTGC--AAGTCCTGTGACTCCCAGCTTAACTGAAATACTGTTATGCCACCTAACTTGAGTACAGCAAACTGGTTTTAGG---TTTCAATGACATTGATGTAAAATGATATCCCATGAATAAAAAGTATTTGTGTTTGGTTTCAGAACAGATGTGTAAATTTTTTCTTCTCTCTTCTGGCTTTCATTTCAAAAACCATTTAAGGT chr4 - 94230402 26167544 26167543 26168121 68062282 68062281 68062859 578 GATTTCTGTTGACCCTTAGTCACAAGCCTAACAAGTTGTTAAATGCTCTTAAA-TTCATATAGACAGCTTTAAAGGTTACCATGTGCCCT--GCTTTTA--ATTATAAGTGCTATAATACCTCTTTATAAGCCTTATATTTTACCCATTCTAAT--TGCTATGTAAGTGTATAGAACCCATTCACCAACTAAATAGGTCATTGTCTGTAACTGAGACCAAAATGTGTTTTTTTTTTTTCCCCTCTCTATATATAtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtTGTCACCAAGTAGTTCCTAAT-GAAGCTGCTGTTGGA--ACAGCAGTTAACCTGTAACTGTGAATGCTTTATGTCTTAGTTATTTGGGTATTACATGCAT-AAGGTGTGCTAAACTCGTATGACTTACAAACTGGTGGAAATGCTGTTATACCACCTTACATGAGTTCATCTGGTTAATTTTTAGGTCTTTTGCTGGTGTTGATGTAAAATGGAATCCCACAAATAAAGAGTATTTGTG-TTGGTTTCAGAAACGGACTTAAGATTTTT---------CTGTGGTTCGTGCTTCAGAAATTCTCTGATGT .....x.x..xx.:..:....x.x.x::.....:---------....:..:..-..:...:...x.........:....x:x........--.:.....--x...x..x.....x.........--:..........x:....::.x...xx..--..:xxx:...:........x::....x..........xx.x.x:x.........x...........:...xx..x:.....------------------------------------------------------...:x..:..:..:...x.-.::.:.:.....x:.--.......x......:...............::....x.x:x.....--.:.......x...-..:......--..x..x.:.....:x..:x:.:::x.....:.......:......x..x.....x..x.x:::.::....x:.---...::x..:::.............:x......::......:..........-............xx.:xx.xx.:......---------:.x...:.:x:::....:...::x.:.:.x.. 34M9I10M1D36M2D7M2D23M2I28M2D81M54I19M1D15M2D46M2I13M1D9M2I73M3I51M1D29M9D32M 367/506 72.5% 578/94230402 0.0% 93/506 18.4% 25748825 NA +3705 chr4 + 190214555 51933857 51933856 51933992 136 TACTAATATATATATATACACACACAC---ACACACACACACACACATATATATACACACA-----------CATATATACACAC---------ACACATATATATATACATATATATACACACATATACATACATACACACACACACACGCACACACA chr4 - 94230402 14964725 14964724 14964883 79265520 79265519 79265678 159 TACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ....x...x..:....x.:...x:::.---:...x:...x.x.::...x.:..:..x..x.-----------...x....:.x.x---------.....x....:.x.:.:.:.::.:..::::..:..:.....xx........::...:........ 27M3I31M11I13M9I65M 91/136 66.9% 159/94230402 0.0% 23/136 16.9% 36969132 NA +3249 chr4 + 190214555 51933858 51933857 51933935 78 ACTAATATATATATATACACACACACACACACACACACACACATATATATACACACACATATATACACACACACATAT chr4 - 94230402 66904835 66904834 66904912 27325491 27325490 27325568 78 ACTGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...:x.:.x.x:.....:::..::.........:.........:....x..x::x..x:.:......xx..:..::.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -14970977 -79259425 +3151 chr4 + 190214555 51933861 51933860 51933925 65 AATATATATATATACACACACACACACACACACACACACATATATATACACACACATATATACAC chr4 - 94230402 17520748 17520747 17520812 76709591 76709590 76709655 65 AACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ..:.x.......x.....x.:.....:...::::x.::.x.:....x.....::........:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 34413113 NA +3611 chr4 + 190214555 51933862 51933861 51933975 114 ATATATATATATACACACACACACACACACACACACACATATATATACACACACATATATACACACACACATATATATATACATATATATACA-CACATATACATACATACACAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x..x.:.....:.............x:x...:..:...:x:x:.x::....::...xx.x:..:x:.x.....:.:...:x...x....::-....x.:..xx.....:.x.. 93M1I21M 74/114 64.9% 115/94230402 0.0% 1/114 0.9% 47516519 NA +3472 chr4 + 190214555 51933863 51933862 51933962 100 TATATATATATACACACACACACACACACACACACA----------CATATATATACACACACATATATACACACACACATATATATATACATATATATACACACATATA chr4 - 94230402 4417346 4417345 4417454 89812949 89812948 89813057 109 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x.:...................x:x...:..:..----------..:..:...xx.x:..:x..x...:.....:.:x...x.....:.-:.:.x.:..xx....... 36M10I45M1D18M 71/99 71.7% 109/94230402 0.0% 11/99 11.1% 47516517 NA +3719 chr4 + 190214555 51933864 51933863 51934029 166 ATATATATATACACACACACACACA-CACACACACACATATATATACACACACATATATACACACACACATATATATATACATAT-ATATACACACATATACATACATACACACACACACACGCACACACATATATATATACATATACACACACACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAA-GTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGT------------GCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..:....x.:...x:::.xx.-...x:...x.x..::..x.::....x..x.x.x:..x.-:::...x......x.x:.:.-:.:x.....x....::x.:.:.::------------......:::...:........xx:.......::............. 25M1I38M1D20M1I24M12D46M 100/153 65.4% 155/94230402 0.0% 15/153 9.8% 36969134 NA +3169 chr4 + 190214555 51933866 51933865 51933930 65 ATATATATACACACACACACACACACACACACACATATATATACACACACATATATACACACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:...::.........:...........:..x..x:.x..x::::...:.xx..:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -14970981 -79259421 +3269 chr4 + 190214555 51933868 51933867 51933933 66 ATATATACACACACACACACACACACACACACATATATATACACACACATATATACACACACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......::..::.........:..............x..x::x..x:::....:.xx..:..:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -14970979 -79259423 +3071 chr4 + 190214555 51933883 51933882 51933944 62 CACACACACACACACACATATATATACACACACATATATACACACACACATATATATATACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x.::..:...x..:...........:...:......x...:.:.:x..:::.::.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 44337471 NA +3477 chr4 + 190214555 51933899 51933898 51933963 65 CATATATATACACACACATATATACACACACACATATATATATACATATATATACACACATATAC chr4 - 94230402 7596412 7596411 7596476 86633927 86633926 86633991 65 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ....:.x..:..:...x..:....:......:...:....:.x.......:x...:...::.::. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 44337487 NA +3728 chr4 + 190214555 51933899 51933898 51933965 67 CATATATATACACACACATATATACACACACACATATATATATACATATATATACACACATATACAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .......:...::.....:.:................x..x:.x..x:.:......xx....::... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% -14970947 -79259455 +3360 chr4 + 190214555 51933907 51933906 51934030 124 TACACACACATATATACACACA---------CACATATATATATACATATATATACACA-------------CATATACATACA-------TACACACACACA------CACGCACACACATATATATATACATATACACACACACACACACACACACA chr4 - 94230402 14964725 14964724 14964883 79265520 79265519 79265678 159 TACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...x..:.x..:....x.:...---------...x..:.x.x..:...x.:..:..x..-------------...x..:...x.-------.:x.....x.:.------.::.::.....:.:...:....:.:.xx........::............ 22M9I28M13I12M7I12M6I50M 89/124 71.8% 159/94230402 0.0% 35/124 28.2% 36969182 NA +3103 chr4 + 190214555 51933909 51933908 51933983 75 CACACACATATATACACACACACATATATATATACATATATATACACACATATACATACATACACACACACACAC chr4 - 94230402 8395787 8395786 8395861 85834542 85834541 85834616 75 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..::::::...:.:::..:.x....:...x..:.:..:...::x:...:xx.....:...:.........x.... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 43538122 NA +3211 chr4 + 190214555 51933911 51933910 51933996 86 CACACATATATACACACACACATATATATATACATATATATACACACATATACATACATACACACACACACACGCACACACATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACAT-TA-ATACACACACACACACACAGACACAAATGAATA ..::::.:...:::::..:.x.:..:...x.......:...:.x:....-..-.....:.............x:....x.::x... 49M1D2M1D33M 58/84 69.0% 84/94230402 0.0% 2/84 2.4% 43538124 NA +3166 chr4 + 190214555 51933923 51933922 51934000 78 CACACACACATATATATATACATATATATACACACATATACATACATACACACACACACACGCACACACATATATATA chr4 - 94230402 54293151 54293150 54293228 39937175 39937174 39937252 78 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..x.::.....x...:....:..:...:.::.::xxx:..::..x.xxx::......x....:............... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% -2359228 -91871174 +3766 chr4 + 190214555 51933929 51933928 51934031 103 CACATATATATATACATATATATACACACATATACATACATACACACACACACACGCACACACATATATATATACATATACACACACACACACACACACACAT chr4 - 94230402 73121106 73121105 73121208 21109195 21109194 21109297 103 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTAT ..:::....x:.....:.....:...x.x::..:x:.......::.:.x::.....x::.:.::.:x:..:...:.x....:.x....x.x.......:::.. 103M 64/103 62.1% 103/94230402 0.0% 0/103 0.0% -21187177 -73043225 +3326 chr4 + 190214555 51933930 51933929 51934000 71 ACATATATATATACATATATATACACACATATACATACAT----ACACACACACACACGCACACACATATATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::.:.::...x....:...x....:.::...:.x.....----..............:..x.....x..:x... 40M4I31M 53/71 74.6% 75/94230402 0.0% 4/71 5.6% 43538134 NA +3535 chr4 + 190214555 51933948 51933947 51934029 82 ATATACACACATATACATACATACACA--------CACACACACGCACACACATATATATATACATATACACACACACACACACACACAC chr4 - 94230402 89016082 89016081 89016171 5214232 5214231 5214321 90 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACAC ..:.:.......x.:...:..:.....--------........:...x.::....:.::..x.::.:.:::..x....x::.:....... 27M8I55M 57/82 69.5% 90/94230402 0.0% 8/82 9.8% -37082134 -57148268 +3129 chr4 + 190214555 51933957 51933956 51934030 74 CATATACATACATACACACACACACACGCACACACATATATATATACAT--ATACACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:::..::.:::..:.x...:::::x:...:..:...::x.....--...................x..... 49M2I25M 50/74 67.6% 76/94230402 0.0% 2/74 2.7% 43538170 NA +3278 chr4 + 190214555 51933957 51933956 51934022 66 CATATACATACATACACACACACACACGCACACACATATATATATACATATACACACACACACACA chr4 - 94230402 66904846 66904845 66904911 27325492 27325491 27325557 66 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......::...:..........:....:......:..x..x:.x:.x:.:..:...xx..:..:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -14970889 -79259513 +3100 chr4 + 190214555 51962787 51962786 51962852 66 CCTTTCTCATTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTGCTCTGTT chr4 - 94230402 52825907 52825906 52825972 41404431 41404430 41404496 66 CTTTTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTTATGACAAGCTTTAGCTTTATT .:...:::.:::........x...:....x.......:...x...:x....:.x.:.x...:.:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -863120 -93367282 +3022 chr4 + 190214555 51963079 51963078 51963116 38 TGCCTCCCAAAGAATTAGAATTACAGGTGTGAACCACC chr4 - 94230402 59799603 59799602 59799640 34430763 34430762 34430800 38 TACCCCCCATGGAATTAGAATTACAGGTGTGAACCACC .:..:....x:........................... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -7836524 -86393878 +3042 chr4 + 190214555 51966194 51966193 51966335 142 TTTCCTCCTTCCCTCCTTCCCTCCTTCCTTCCTTCCTTTCCTCCTTCCCTCCTCCCTCCTTCCTTCCTTTCTTCCCTCTCTCCTTTTCTCCTTCCTTTTTTCCTTCCCTCCCTCCTTTTCTCCTTCCTTCTCTCCCTCCTTT chr4 - 94230402 51102254 51102253 51102394 43128009 43128008 43128149 141 TTTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTTTTT-ATCTATTCATATCTGTTTTCTTTGCCCATCTGTGTCTTTT ...:..::x..::::.....x..:x:..x.:..xx:.x.:::::..:...x...:..::x.:xx.:...x:....:::........:....x.x.:.....-x.::x:..x:x:..x..:..:..x.::x...x:x..:... 101M1D40M 79/141 56.0% 141/94230402 0.0% 1/141 0.7% 863940 NA +3625 chr4 + 190214555 51966203 51966202 51966409 207 TCCCTCCTTCCCTCCTTCCTTCCTTCCTTTCCTCCTTCCCTCCTCCCT---------CCTTCCTTCCTTTCTTCCCTCTCTC--CTTTTCTCCTTCCTTTTTTCCTTCCCTCCCTCCTTT------TCTCCTTCCTTC---TCTCCCTCCTTTTCTCCTTCCTTCC---------CTCCTTCCTTTTCTTTCTTTTTTTTGAGGCAGGGTTTCACTCTGTCATACAGGCTGGAGTG chr4 - 94230402 91731746 91731745 91731981 2498422 2498421 2498657 236 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCGCACCCGCCTCACCCCCCTCACTCACTGCTTGGGGACACGAGCCCCCCCTCCCTGCCATGCTGGGGTG .::...x..:.:.:..x.:..x...:.:....:......:.:......---------:.....x.:::.:..:..:.x....--.x...x.:x:...::x.:....x.x..:x..x.:x.------..:..x.:x...---.....x..::..xx.x.x...x...---------.::.x:..:::..x:..x:.x:..x.:.:..x.:x::.x.:..x:.xxx..x.....:... 48M9I25M2I36M6I12M3I25M9I61M 126/207 60.9% 236/94230402 0.0% 29/207 14.0% -39765543 -54464859 +3296 chr4 + 190214555 51966221 51966220 51966276 56 CTTCCTTCCTTTCCTCCTTCCCTCCTCCCTCCTTCCTTCCTTTCTTCCCTCTCTCC chr4 - 94230402 83554927 83554926 83554982 10675421 10675420 10675476 56 CTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC ..:x:...:.:...:..:.x.....:.........:.........::.:...::.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% -31588706 -62641696 +3131 chr4 + 190214555 51966249 51966248 51966359 111 CTCCTTCCTTCCTTTCTTC--CCTCTCTCCTTTTCTCCTTCCTTTTTTCCTTCCCTCCCTCCTTTTCTCCTTCCTTCTCTCCCTCCTTTTCTCCTTCCTTCCCTCCTTCCTTT chr4 - 94230402 12140644 12140643 12140756 82089647 82089646 82089759 113 CTCTATGCTTGCTGTTTGCAGCTTCATTTCCTCTTTCTGTTCATTTTTCCTTTCCACTCTCCTTTTGTACCACCTGCCTTCTGTCCTATCCTTACTATTTCTCTACATGCTTT ...:x.x...x..x.:.x.--.:..x:.:.:.:.:..:x.:.x.........:..x.:........x.x.:x...x.::..:x....x.:..:x:.x:...:..x.x.x.... 19M2I92M 70/111 63.1% 113/94230402 0.0% 2/111 1.8% 39825605 NA +3304 chr4 + 190214555 51966256 51966255 51966325 70 CTTCCTTTCTTCCCTCTCTCCTTTTCTCCTTCCTTTTTTCCTTCCCTCCCTCCTT-TTCTCCTTCCTTCTC chr4 - 94230402 179499 179498 179569 94050834 94050833 94050904 71 CTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTC ...:::......:....xx.....x.x:.:x.:....x..:..:...........-..:...:..:.:... 55M1I15M 51/70 72.9% 71/94230402 0.0% 1/70 1.4% 51786757 NA +3461 chr4 + 190214555 51968956 51968955 51969050 95 AAGAGGTCCTTCATTTCATTTGTTAGCTGTATTCTTA--GGTATTTTATTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGTAGTCTCACTCTGTTGC chr4 - 94230402 5847601 5847600 5847695 88382708 88382707 88382802 95 AAGAGGTCTGTCAGCCC--CTGGGAGCTGTGTGGTTATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ........:x...x::.--:..xx......:.xx...--.xxx..:...x...............:.::.........x.:x....::...:x.... 17M2D18M2I58M 67/93 72.0% 95/94230402 0.0% 4/93 4.3% 46121355 NA +3031 chr4 + 190214555 51979742 51979741 51979819 78 AACACACACATACACACACACACACACACACACAGGTGGACAAAATACATGTCAGCCAAAGGCTAAAAAGATTTTATT chr4 - 94230402 85245750 85245749 85245827 8984576 8984575 8984653 78 AAAACACAAAACCACACACACGCACACACACAGAGAATAATAAAATAAATGAAAACAAATGGCAGGAGATGTTTTCTT ..x.....x.xx.........:..........x..:xx:.:......x...xx.:.x..x...x::.:.x:....x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% -33266008 -60964394 +6369 chr4 + 190214555 51995739 51995738 51996196 458 TCATCGTAGAAGCCCTCGTTTGAATACGCGTTGTCCAGGCCAGGGCTTTTGCTCTGGCACTTTTTTTGCCACAGTCTGTCAACATAAGGCCTTGTGAAAGCCCCCAGGCTGAAGGCGACAAGGAATGTGATGAACACTGACAGGCACACCGCCAGAGCCAGGTCCTGGGGAGCGTCCTCTTTTTTG---CCGGCAGCCTGCACATCGCGGGTGCTTCTAACACTCCTTGGCAGCCGTCTCTGCTTCTTCCTGAGACCAGAGCCGGCCTTTGCCTTCTTCCCCAGAGTAGAAATGCCCGTGTGCCTTCCTCCCTGGGGCCTCTCTGCTTTGCTCCTTATGAGGCTTTTCATGCGATGCAGATGAATGGGAGGAAGGCGGGTTTCCCTGGAAATCCTGCTCTGGGGAGTGCCCCCGTTGGCCTCCTCACTCCCTGCAAGTGGGATTAAAAAAATACACATTGA chr4 - 94230402 26174966 26174965 26175418 68054985 68054984 68055437 453 TCATCTGAAAAAGCATGGTTAGCGTAGATGTGTTCTGGAGCCGGAGCTTTGTTCCTGCACATGCGCATCCACAAGCGTGTGAGGCAGGGCCTGGCCAGGGCGCCCAGGCAGAAGGCACAGAGGAATGTAATGAACACTGAGAGGCATACAGCCAGCGTCAGGTCCTGCTGCGTTCCTCCTGCTCTGACACCGCCTGGGTTGGTGGCCCGAGTTTTTCTAACCAGAGATGCTGGAACCCTTTCTTTCACCTGTACACTGTAGATGAGATACTTCTTCCTTGCTGTATTAAAAGCACACACATATAAGCCCTCATCGGTTTTCTCAGCATTGTGTATTACTAAATTATTAATTTTATCCAGTGTCAGATGAGGAGAACTGCTTTCCTCTGAAATTCTGCCTTTAGGTGT-CCACCAAGAGACTC--CATTACCTG-AAATGA----AAGAGAACACAAATTGA .....xx.:..:x.x.x...x.x:..x::..xx..::.:x.x..:x:....:..:x....x.x:x:xx.....:x.xxx::.x::.:.....x.:x.::..x.......x......:xx:........:...........x.....:..x.....x.:.........xx.x.:x:.::..x:.:..---...x.x.xx.xx:::x.x..:..x:.......xxxxxx..x::.xxx:..:.x:...x:.:xx.x..::x..x:.:xx.x:x:....:.:x.::x.x..:..:::.x.:::.::xxx..::.x.x..x::....x..x...:x:x...:x.:::.x..x..x:x..x...xxxx.x:x.....:::.x.x.....::x.....:....::.x:..x..-..x..:xx:.x...--..:.x....-..:..:----..:.:..:...x..... 186M3I218M1D14M2D9M1D6M4D17M 251/450 55.8% 453/94230402 0.0% 11/450 2.4% 25820773 NA +8211 chr4 + 190214555 52003197 52003196 52003394 198 AAATATTATAAAAATGATTTTAGAACCTGTAATTTTTTGAGGTCCTTGAAGGCTTGTGGGGGAATTTTGAATATCTTGTTGCTCTTTAAACAGAGATTCTCCAGTTGCAGGCAGTTGTGAAAATCAGACCACCCTATTTGCAATATCCCATTGAATGACAGATCCAAACTCTGCAATGACTTCAGTTTCCACAGTCCT chr4 - 94230402 26178882 26178881 26179078 68051325 68051324 68051521 197 AACTGTTGTAATGCTG-CTTTACGACCTGTAGTTTGTTGAGATCCTTGAAGGCGTCGGGATGAATGTTTGCTATCTTGTTGCTTTGCAGGTAGATGTTTTTCAGCTGCAAACAGTTGTGAAAATCATTCAGGTCAATCTGCAGTATGCCATTGAACGACAGATGGACAGTCTGTAAAGACTGCAGCAGTCCTAGCCCT ..x.:..:...x:x..-:....x:.......:...x.....:...........x.xx..:x....x..x:x............:.x:.:::...x:..:.:...:....::...............xx.x:x:.x..:....:...x........:.......xx.x.x....:..x....x...:xx:.x:..:... 16M1D181M 138/197 70.1% 197/94230402 0.0% 1/197 0.5% 25824315 NA +3232 chr4 + 190214555 52006681 52006680 52006805 125 CCCTAAAACTTAAAGTATAA-------TAATAATAATAATAATAATAATAATAAAGAAAAAAAAACAAAAACAAAAAAA----------CAAAAAAAAAGTGACAGAAGAAATTATTTTTAAGCTCCTAATTGTGTACTCTT chr4 - 94230402 75135090 75135089 75135231 19095172 19095171 19095313 142 CCTCAATACTGAGAGGATAAGAAGGAATGATAATAATAATAATAGTGAAAAGACAAAAAACAAACAAAAAACCAAAAAACTATATTAACCAGAAAATAAAATAAATAAGACCCtttttttttttttttttttttttGCTCTT ..::..x...x.:..x....-------.:...............:.:.x..x.x.:....x...xx......x......----------..:....x..:xx.x.x....xx:.x.....xxx:.::.xx..x.x.:..... 20M7I52M10I53M 86/125 68.8% 142/94230402 0.0% 17/125 13.6% -23128409 -71101993 +3076 chr4 + 190214555 52006726 52006725 52006781 56 AAAGAAAAAAAAACAAAAACAAAAAAACAAAAAAAAAGTGACAGAAGAAATTATTT chr4 - 94230402 38540320 38540319 38540375 55690028 55690027 55690083 56 AAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAATTATCT ...:.x....x..x.x......:x.............:.x.x:...........:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 13466406 NA +9936 chr4 + 190214555 52017072 52017071 52017630 559 ACTCCACGTAAGCATTGTTTCTCTGCCTAGTTAAAATTGTACTCACCCTTGGGAGTGTCACTGAGTTTATTTCTTTGAAGAATGAGCACCTTCA----------GCAATGGAAACCTGTTTCTGAAGCTGCTTCTGTGGCGTTTCACCCATGAGGACTTAGGACTGAGTAGATCCAATGAGAGGGAGTGGATGGCATTGTTGCTGAGGTTTAACACTTCCAAAGCATGTAAATATGCAAAAGGGCTTAAGGTTATTTTTGATATGAGATTGTTACTGAGGTCCAGATGTTTTATTTTCCACTCTTCTTTTTTCGTGTGAGACTGTAAGAGAACTCTAAAGAAATTGAAACTTACATCCACAGTGGCTGCTGTCTGTGATATGTCCACAGGTATATCACACTTTCCGGTAAAAGAACAATTTGTCAGAATATATTCATTCCATTGGCATTCAGAATTG--------AATAAAATATTGCTTTTTCTTGATGCATTTGTCATTATTCCAG------TAAAATAAAGACCTATAACTATGGTAATGACTCTGAAATAGAGGTTTTTCATAATGCCTGGAAAAAGGA chr4 - 94230402 26180431 26180430 26180985 68049418 68049417 68049972 555 ACTCCTTGTGAGTGATGT--CCTTACATATTTTGAAATG--CTCACCTGTTGGAACTGCATGGAGGTTATTCCTTTCAGCTGACAATACTTTCAAAGCAGGCAGGAAATGGTGG---ATTTCTCCAAATGTTT-------GAGATACACGTGCAGGTGTAGG------TGGGTCCAGTGTGAGGGTGCTGATGGAGTTACCATTGAGGTTTAGAGTTTCCAAAATTGGTAAGTTTCTAAAAGCAGTGATGGAGATTTCAGAAATCAGGTTGTTACTGAGATTCAGATGTTTCAGCATCCAGTCTTCATTTCTCCCGGTGGTGCACAGGAAAGTTTTAATGTTATTGTAACTTAAATCGGCTGTTACGGCTGTTAGTGATAGATCTTCAGGAACAGCAGGCAGTCCCATGAAAGAGCAATTCACTACGAACTTCTCATCCCACCAGCAGTCTGTATGGTGATGTGTATTAAGAAGCTGCTGTGACTTGGTTC-----CCGCTGATCCAGGACGATTAAAGTAAAGG---AGCAGCACAGCTGTGACACTCAGGTGAATGTTATCCATAACGTCTATACATAAGA .....x:..:..::x...--.::.:.x..x..x:..x..--......:x.x...::xx..:x...x.....:....x.:xx:xx.::..:....----------.x.....x::---:.....xx.:x..:..-------.xxx:..x.:..x:.::x....------.:.:....:..x.....x.:x.....x:..:::::.........:x::.......::xx....:.x.x:.....x:x.x.x..xx....:x..x..x..:...........:.:.........:.x:x....x.....x...:..x:.xx:.xx:::.:..:.::.:...x.xx....x......x...x:.x..x:.x.....:x......x:..:x....x.:.x..x:.xx...x:.:.....:.....::::.x:.xx.x:....:...:::...x..x.x..x.--------.x...:.x::....x.xx....:.x.-----:.::.:x.....------....:.....:---.xx.x:.::.:x:....x..x.::.::.x...x.:.....:.:..:x.x.x.:.. 18M2D19M2D53M10I10M3D16M7D22M6D289M8I26M5D12M6I11M3D55M 325/531 61.2% 555/94230402 0.0% 52/531 9.8% 25836641 NA +11845 chr4 + 190214555 52023825 52023824 52024178 354 CATAAAACAG----ATACAGCAGTGCTCTGCCATTAAAATAATTATGA-------GTTATCACAAACTCT-GTAAAAACAATGAT--TTGCATGCATAAAAAAGTCAAGTCA-------AGATATAAACATGTTGGTGACCTCT----GGGGTTCTTT------TAATGAGTGTTTCCACAGGGGTTGTCTGAGATTTGGCAGCCCATGTTCTGGCTGGTTACTTGCACCTTGAAGAGCGTCCCATCAGCACACATGCAGAGCTTGTAGCGTACCCAGTCACCACTACCCAACTGGTCTCCACTGGAGGAACTGGGTAGGCGGGTGGTGCTGACCATCACAGATCCATTTAGGATGATACTGTTTTCCTATTAGGAGAATAGTAA chr4 - 94230402 26183200 26183199 26183578 68046825 68046824 68047203 379 CATGAAACTGCTGAATGTAACAGC---CTGTGCTTAAAAATATTACGTAACAAATGTTAGTATAAACTCTTGTAGAAACAGAAATCCTTGAAGGCATGCA---GTTACTTCATACAAATACATGTAAACACATAGGAGAACTCTTCTGGTAGTGCTTTGTGTTTTAGTGCGTGGCTCCACACGGATTGACAGAGGTCTGACAACCCATGTTGTGCCCTGTCACTTGCACCTTGAACAGCGTGCCATCTGCACACATGCAGAGCTTGAACCTCAGCCAGTTGCCGTTGTTAAACTGCTCCCCGTAAGAAGAGCTTGGCAGTCGCGACGGGCTGACCATCACAGTTCCATTCAGGATAATGCTGTTCTCCTTTAAAGAGGGAAGGAA ...:....x.----..::.:...:---...:xx......xx....:.x-------....x:.:.......-...:.....:x:..--...x.x....:x.---..:.xx...-------.x..:......::.x..x..x....----.x:..x....------..:..x...x:......x..:...x.x...:.:..:..:........x..x.:x..:..............x.....x.....x..................x.x.x:.x.....::..::.:::x.....x..:..::x:..:..:..x..:..x..x.xx.x..............x......:.....:..:.....:....x.x.:...::x..x.. 10M4I10M3D21M7I15M1I14M2I13M3D9M7I25M4I10M6I221M 251/348 72.1% 379/94230402 0.0% 37/348 10.6% 25840625 NA +3166 chr4 + 190214555 52026212 52026211 52026269 58 ATTTAATTTTACTTTCTTTAAATTGTTTTTTG-TTGTTGGTTTTTTTTTTTTTTTTTTT chr4 - 94230402 61884651 61884650 61884709 32345694 32345693 32345752 59 ACTCAGGTTTAATTTCTTTTAATTGTTCTTTGAGTGTTGTTTTTTTTTTTTTTTTTGTT .:.:.:x....x.......x.......:....-x.....x................x.. 32M1I26M 48/58 82.8% 59/94230402 0.0% 1/58 1.7% -9858439 -84371963 +10162 chr4 + 190214555 52027959 52027958 52028128 170 AATACTCACCGCCTTTAACTCCATATTACCACCCATGTGAAATTCAATGGTTTTGCCCATAATGAATACACCTTCATTTCCACGCACAATAGCACGCCCATCAACTTTTATATTTAAATCACTGGTAGCATTGCTGGTAATCTGAAAATTTAAAAAACAAGTACTAAAAA chr4 - 94230402 26184207 26184206 26184371 68046032 68046031 68046196 165 AATACTTACTGCTTTAAGCTCCATGTTGCCCCCCATTCGGAACTCAATGGTTTTGCCTGTGATGAAAACGCCTTCATTTCCACGGACAATAGCACGGCCATCAACCTTTATATTTAGGTCACTGGTTGCATTGCTAGTAATCTACA-----CAAACACAAGTATTACAGA ......:..:..:..x.:......:..:..x.....x:.:..:..............::.:.....x..:..............x...........x........:..........::........x........:.......:x.-----x...x.......:..x.:. 146M5D19M 134/165 81.2% 165/94230402 0.0% 5/165 3.0% 25843752 NA +13798 chr4 + 190214555 52028725 52028724 52028939 215 CATACCCTTTCAGTAGATGCCTTTTGAACATTCAAACTTTTCACTCCACTTGGCAAATGAAACTCATGAGTTTCATAGTCTGTGCTGAATAAGATATTTTGAGTCCTCGGGTCAAAAAACTGCATGCCGATGTCACTTGTAATAGAAGTTTTGTTGTTTTCTACACTGAGCTTTGTTGTCCCTTGCTGAAAAACAATCTTCAAAAAAAACAGTTT chr4 - 94230402 26185340 26185339 26185554 68044849 68044848 68045063 215 CATACCCTCTCCGTAGAGGCCTTTTGCACGTTCAAGATCTTAACTCCATTTGGCAGATGAAACTCGTGAGTTTCATAGTCAGTGCTGAACAAGGTATTTTGTGTCCGCGGGTCAACAAATTCCATGCCGATATCGCTGGTGATGGAAGTCTTGTCTTTTTCCACGCTAAGCTTGGTCGTTCCTTGCTGAAATACAATCTTCAGAAGCAAGAGCCT ........:..x.....x........x..:.....:x.:..x......:......:.........:..............x........:...:.......x....x........x...:.x.........:..:..x..:..:.....:....:x.....:..:..:.....x..:..:...........x..........:..:x..x..::. 215M 174/215 80.9% 215/94230402 0.0% 0/215 0.0% 25843385 NA +13040 chr4 + 190214555 52029655 52029654 52029873 219 TTTCAGTTAATGTGGCAACTTACAGGCTGGTTGTTGCCAGTGATGACCAAATTTTCATTTCGCCTTCCTCCTACTGTGCTTTTATAAAGAGGGTGGATCACTCCCATGTCAGATACTTGCTTAAATCGAAGCAGGCCACTTTCATGAAACTCCATACTATCACAGCCATTTGGTCCAATGCGAATCACGGCCCAAATAACAAGTGTTATCTGAAAAAGA chr4 - 94230402 26185605 26185604 26185823 68044580 68044579 68044798 219 TTCCAATTCACGATATAACTTACGGGCTGATTATTCCCTGTGATCACCAGATCTTCATTCCGTCTGCCTCCCACAGTGCTTTTATACAGTGGGTGTATCACACCCATGTCAGAAACTTGCTTAAACCGCAGTAAGCCGCTCTCATGGAACTCCATGCTGTCACAACCATTGGGGCCGATTCGAATCACCGCCCAGATAACGAGGGTAATCTGAACAAAA ..:..:..x.:.xx::.......:.....:..:..x..x.....x....:..:......:..:..x.....:..x...........x..x.....x.....x...........x...........:..x..:.:...:..:.....:........:..:.....:.....x..x..:..x........x.....:.....:..x..x.......x..:. 219M 172/219 78.5% 219/94230402 0.0% 0/219 0.0% 25844050 NA +15034 chr4 + 190214555 52033424 52033423 52033643 220 TACTCACTATTAAATTGATGACAGCCAGGATAAACAAGAGGATAATCACACAGATGGCTAAATTGCCCTTTCTTCCTCTCAACCCTGTTTTGTGGAGACGATCTTCATCAATCGGAATGTATCCAGCTTTAAAGTTACTGTTGTGCTCTTTATTGACACTCCTTCTCTCAACAGCCTTCTCACGCATGGACTTCTTTACAGGACCATTGGAACTTTGCTA chr4 - 94230402 26186207 26186206 26186426 68043977 68043976 68044196 220 TACTCACAATCAGATTGATGACAGCCAAAATGAAAAGAAGGACAATCACGCAGATGGCCAAGTTGCCTTTCCTGCCACGTAAGCCCGTCTTATGGAGTCGGTCTTCATCAATTGGAATGTATCCAGCCTTAAAGTTACTGTTGTGCTCCTTATTGACGTTCCTGCGCTCTACAGCCTTCTCACGCATAGATTTCTTCACTGGCCCATTGGAACTTTGCTA .......x..:.:..............::..:..x.::....:......:........:..:.....:..:..x..x.x:..x..:..:..:.....x..:...........:..............:....................:........::....x.x...x.................:..:.....:..x..x................. 220M 182/220 82.7% 220/94230402 0.0% 0/220 0.0% 25847217 NA +4124 chr4 + 190214555 52045685 52045684 52045781 97 TGGCGCCATCTTGGCTTACTGCAACCTCCGCCTCTTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACAGATGTGCACCAC chr4 - 94230402 18197114 18197113 18197202 76033201 76033200 76033289 89 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ....::...x..------..:..:..:xx:x..::............x...x..x.x........::.:.........:.....--.:......... 12M6D66M2D11M 68/89 76.4% 89/94230402 0.0% 8/89 9.0% 33848571 NA +3979 chr4 + 190214555 52060413 52060412 52060529 117 TTGCAGACAAACACGTGTGATCAAAATCTAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGTGAG chr4 - 94230402 26191311 26191310 26191427 68038976 68038975 68039092 117 TTACAGATCAATTCCTGTGATCAAAATCTGAACCAGTGTTGTGAATTAATAGAAATGACATCTGTGATTCAAGGGCAGCTCTTCACAATCCTCAATGAGACATCTCGAGAAAGTAAG ..:....:x..:x.x..............:.....x..::x....:.x..x..:xx:::xx.::x.:.x..:..:..:.....::x:.......xx.x::..x.:.:....:..:.. 117M 73/117 62.4% 117/94230402 0.0% 0/117 0.0% 25869102 NA +3024 chr4 + 190214555 52077347 52077346 52077400 54 TCCCTCCCTCTCTCCATCTCTTCCTCCTTCTTTCCTTCCTTTCTCCCTTCTTCC chr4 - 94230402 83554928 83554927 83554981 10675422 10675421 10675475 54 TCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCC ..x:.:.:....:..x::x.:...:..:..:...:..........:........ 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% -31477581 -62752821 +6843 chr4 + 190214555 52078726 52078725 52078899 174 TATGTGCAGGAGGCATTCCATGTAGCAAAAATGGCATTCAGACACTTCAAGATCCATGTGAGAAAATCGTTGACACCATCT------TATGTGGGGTCGAATGACTTTGAGAATGCTGTCTTGGATTATGTCATTTGTCATCTTGATCTATATGATTCTCAAAGCAGTGTCAATGTAAGT chr4 - 94230402 26200306 26200305 26200479 68029924 68029923 68030097 174 TATTTCCAGGAGTCTTTCCATGCAGCAAAGATGGCCTACAGGCAGTTCAAAATGCGTGTAAGAAA------GACATTATCTATAGGACATTCGGGGCCTGAGTCACTTGAAGACACCGTTATGGATTATATAGTTCGCCATGAGGATCTGTATGATGTTCAAGCCAGCGTCAATGTAAGT ...x.x......x.x.......:......:.....x.x...:..x.....:..x.:...:.....------....::....------:..x:....:.x:.xxxx:....::.::.:..:x........:.x:..:.:...xxx.....:......x:....:x...:............ 65M6D10M6I93M 120/168 71.4% 174/94230402 0.0% 12/168 7.1% 25878420 NA +7019 chr4 + 190214555 52082366 52082365 52082515 150 TTTTTTGTATATTG----AAAACAGATACCGCCGCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCCTCTATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTGTCATTATGAAGGGAGAAGCTGTCACCAGGAGAGGGGCTTTTGTACG chr4 - 94230402 26203054 26203053 26203207 68027196 68027195 68027349 154 TTTCTTATGCACTGTGTTACTACAGGTATCATCGTAGTGTTGACTCAGATTACACAGCTGCCTTGGTGGCCTATCATGTATGGCCTGCTCTGATGGAAAATGATGTTGTGATCGTGAAGGGAGAAGCAGTCACAAAAAGAGGAGCTCTGGTATG ...:..:.::.:..----.xx....:..:.::..:..:xx:.....:....x...x...x....:..xx:......:..:...........x.....:.....:xx...x..::.............x.....x.::.....:...:.x...:. 14M4I136M 108/150 72.0% 154/94230402 0.0% 4/150 2.7% 25879312 NA +3510 chr4 + 190214555 52109169 52109168 52109238 70 CTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTTTTGAGTAGCTGGGATTACAGGTGCCCGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:...........::x...x.xx.x..........::.........:.:....x...--.:....::.. 58M2D10M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 33912030 NA +3773 chr4 + 190214555 52114377 52114376 52114450 74 CTGCAGCCTCCACCCTCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCTCAAATAGCTGGGGCTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx.x.:......:.....:.x.:.x.xx:x........:....:.......::.....x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 33917251 NA +3165 chr4 + 190214555 52118078 52118077 52118129 52 TGCTTGAGCTGTACTCTGGCCTGTCCAAAAAAAAAAAAAAAAAAAAAAGCTG chr4 - 94230402 89096825 89096824 89096876 5133527 5133526 5133578 52 TGGTTGAACTTTATTTTGGGCTGCCAAAAAAAAAAAAAAAAAGAAAATGCTG ..x....:..x..:.:...x...:.x................:....x.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -36978747 -57251655 +3103 chr4 + 190214555 52139798 52139797 52139834 37 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAGG chr4 - 94230402 48383086 48383085 48383122 45847281 45847280 45847317 37 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGG ..................:...........x...... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 3756712 NA +3669 chr4 + 190214555 52143609 52143608 52143680 72 CTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGCAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.............x...x..x.x........::::..:......:.:....x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 33946483 NA +6139 chr4 + 190214555 52144360 52144359 52144760 401 CTTTGACATTTTCTTCCCTAGAA---GATACGCTTTTGTTGAAATTGATAATTTA-CTACAG--------------TCACGCACTA--AGGCTAAGGTTTGCTGCCATACGTCGCTTATCATAGGA-AGTACAAAGGATCAAAGTCCAACAGAACATTTTGTATTCTGCGTGTTCCACAGAGCTGTCTTGTTATAACTTTTTTTTTTTCCATTAACACTGGAGAGGAAAATAAACTGATGTCAGCTGTGGACATTGCCAAAATAGACATTTGATTTCTGTTAGCTTCGATCCCCCTCTCCTGGGCTTGCCACGTCTCACAGTGGGCT---------CTCAGGGCCT-GATCTG--CTGTGTGTAGGGCTTCCAGTGACAAGCATGGGAGAATCTCCTGTTCAGAGCTCAGCTGTCCTGTTGGAGTTCTTTCTCT chr4 - 94230402 26221416 26221415 26221805 68008598 68008597 68008987 390 CTCTGA-ACTTCCTTCCTGAGAACATGATATGTTTTAATGAAAAATAACATGATATCTTCAGCATTTTTTTTCTCCTCATGAACCACTAAGATAAGGTCCATTGC-ATATGTTGTGTATCAGAGAAGAGCAGTAAAGAGAAAA-----CCAGAACATTCC--AGTCAGCCTCTTTCAC----------TTTGACAATTTCTTTATTT--CTTTAGCAAAGGGGAGAAAAT--AACTGACATTAGCTGCAGGCCCTGCCAAAATAGACATTTGTTTTCCATTAGCTGCACATACCCTTTCTTAAG--------GGCTTACTGTGAACTGAGACGCAGCTCTGGGCATAGATCTGGTTTATGTATAGAATTTT---TGATAAGGAGAAGTAAACCTCGCACTCAGAAGTTTACTGTC----------TCCTTCTCT ..:...-.:..:.....:x....---....:.:...x:.x:...x.:.:.xxx..-..x...--------------...:.x..:.--.:.x......::::...-...:..:.:x.....x..:.-..:.xx..:..xx...-----x.........::--.x..x..x.x..:...----------.x.x.:..:..:...x...--.x...:..xx..:...:...x--......::.:.....::.:.x:..................x....::......x.:xx:x....:..:.::.--------.x..:..x...::..---------...x....x.-......--:.:...:...:::..:---...:...x.x::.x:..:...x:::.....:x.:x:.....----------..:...... 6M1D16M3I29M1I6M14I10M2I17M1D20M1I16M5D12M2D16M10D19M2D21M2D72M8D15M9I10M1I6M2I16M3D41M10D9M 244/357 68.3% 390/94230402 0.0% 77/357 21.6% 25922944 NA +3075 chr4 + 190214555 52159050 52159049 52159170 121 TTTCCTCAATAAAAAAGTTTTCTCCTTTCCTTCCTTCTTCTCTCCCTCCTTTCTTTTCTTTTCTCTTTTCTTTTCTCTTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTTTC chr4 - 94230402 20485597 20485596 20485715 73744688 73744687 73744806 119 TTTTCTGAAAAATATGACTTGCT--TTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTTAATTTCATATTTATTCC ...:..x..x..x.x:::..x..--..:.x::...x.::.x.:...:..:..:.:::...........:.::..::.:.......:.:::..xx:.:x.x....xx..::x.x.:.x..:. 23M2D96M 70/119 58.8% 119/94230402 0.0% 2/119 1.7% 31673453 NA +3233 chr4 + 190214555 52159101 52159100 52159168 68 TCTTTTCTTTTCTCTTTTCTTTTCTCTTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTT chr4 - 94230402 9693768 9693767 9693835 84536568 84536567 84536635 68 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .::..:..:.:.::..::.....:....:x...:..x.:...x..x...:........::.:..:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 42465333 NA +3465 chr4 + 190214555 52160780 52160779 52160841 62 CAGCTCCATTTTACAGGTGAAGAAATAGAGTCACAAAGAGGTCAAGTCCCTTGCTCAAAATC chr4 - 94230402 10729201 10729200 10729262 83501141 83501140 83501202 62 CAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...................:::...:x...x....x.x....:....xx:....:..:.:.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 41431579 NA +3082 chr4 + 190214555 52182823 52182822 52182878 56 AACAACAACAACAACAATAACAACAATTTAAAAATGGACTAAGGACTTGAATATAC chr4 - 94230402 43413740 43413739 43413795 50816608 50816607 50816663 56 AAGAACAACAACAACAAAACCAACAATGAAAGAATGGACTATGGATTCAGGTGTAC ..x..............x.x.......xx..:.........x...:.::::.:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 8769083 NA +4110 chr4 + 190214555 52183657 52183656 52183739 83 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGTGCACACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx.x..:.::..........x...x..x.x........::...........:..x...x...--.......:.. 71M2D10M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 33986531 NA +3720 chr4 + 190214555 52188169 52188168 52188250 82 TATGAAGCAGATA-TTCCTGTGAGCTTAATTGTATAGATAAGGAAACTGAGGCAGACAAAGGTTCTATGATTTGCCCAAAGTC chr4 - 94230402 10729180 10729179 10729262 83501141 83501140 83501223 83 TGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:...:.:..:..-..x..:.x....:x...x..:..:.::.:...........x.:.x.....xx:.:.........:.... 13M1I69M 59/82 72.0% 83/94230402 0.0% 1/82 1.2% 41458989 NA +3046 chr4 + 190214555 52198911 52198910 52198966 56 AAAAAAAAAAAAAAACACACAAGAAAACCTCCTGCTCATGTTTCCCCCTCATTCCC chr4 - 94230402 57376802 57376801 57376857 36853546 36853545 36853601 56 AAAAAAAAAAAAAAAAACGCAAGGAAACAGCATGCTCAAGTTCTCATCGCATTTCC ...............x..:....:....xx.x......x...::.x:.x....:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -5177891 -89052511 +3250 chr4 + 190214555 52211846 52211845 52211891 46 ATGGCTATTATTTAAAAGTAAAAACAAAAAAACAACAACAAAAAAA chr4 - 94230402 36779181 36779180 36779226 57451177 57451176 57451222 46 ATGTCTGTAATTTAAAAACAAAAACAAAACAACAACAACAAAAAAA ...x..:.x........::..........x................ 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 15432665 NA +3130 chr4 + 190214555 52233918 52233917 52233976 59 CATCTCTCTGTATGTAGACTTGTGTGTGTGGGGGGGGGAGGGGGGTGGGTGTTTGTGTG chr4 - 94230402 28930613 28930612 28930671 65299732 65299731 65299790 59 CATTTTAATGTATATATAAGTGTGTGTGTGGGGGGGGGGGAGGGGAGGGGGTGTTTGTG ...:.:xx.....:..x.xx..................:.:....x...x..x.x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 23303305 NA +3419 chr4 + 190214555 52233926 52233925 52233975 50 TGTATGTAGACTTGTGTGTGTGGGGGGGGGAGGGGGGTGGGTGTTTGTGT chr4 - 94230402 28930623 28930622 28930672 65299731 65299730 65299780 50 TATATATAAGTGTGTGTGTGGGGGGGGGGGAGGGGAGGGGGTGTTTGTGT .:...:..:::x........x..............:.x............ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 23303303 NA +3850 chr4 + 190214555 52251232 52251231 52251310 79 CTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:.:...........x...x.xx.x........::.............:....x...--...... 71M2D6M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 34054106 NA +3537 chr4 + 190214555 52274434 52274433 52274502 69 CAAGAGTGAAACACCATCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA-TATATAAG chr4 - 94230402 69437718 69437717 69437787 24792616 24792615 24792685 70 CAAAAATCCAATGCAATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAG ...:.:.xx..::.x..:.::.........x........:x...................x-..:..... 61M1I8M 54/69 78.3% 70/94230402 0.0% 1/69 1.4% -17163284 -77067118 +11983 chr4 + 190214555 52359104 52359103 52359497 394 TGATAGGCAGAGATTCTGAA---GGGAGCTTTGGGAATGGAACATCTGGTTTGGAAGGAAGCC-----------TTATAGGCCAACCCCCTGTAGGCCAGGGTAGGAGAGGAAAACAGGAAGTTTTATTCATCTTACTTTCTTGGTTTTTCAAGTTACAGTCTCCAGCTGTTTATATCAACTTTGTTTTTCCTAAAGAGCACAGAGAGTATAAAGCACTGTTAAGTCACAGC-------CTTTCCATTAAGTAGCCCTTTGTAGAAAAT--CGGAGTTATTCTTTGACTTGGCTAGTTCATCTTTTATTTTTCTTTTCTTCGCCCAAAGCAAATATCTTTTCCCTGGCTTCTTTTCAGGCCTGAATAAGTTGTAGAGAAGGACGAGAGGAAAGAAGTTTGGGAAGAAGAAGGTGGGG chr4 - 94230402 26268109 26268108 26268502 67961901 67961900 67962294 394 TGCTGGAAAGAGAGCCCAAACCTGAGCCTTTTGGGAATCCACCATCTGTTTTGAAAAGGAGCTGAGGAGGTTATCCACAGCTCCATCCCCTGCAGGTTGGGATAGGAGAGGCAAACAGGAAGTTTGATTCATCTGACTTTCTCAGTTTTCCAAGTTACAGTCTCCAGCTGTTTCCCAAAACTTTATTTTCTGAAGGAAAAAAAAAGACAACAAAACACCTCTATG----AGCTATTTAGCTTTCTTTTAAGCTGCTCTTTATTGAAACCTGTGTAGTCATTTTTTAACAACTCCAGAGTATA------CTCTCTCTTCTTTTCCCAAAACAAACATCTCTTACTCAGCGTTTCCTCA-GCCTGAA-----TGCAGAGAA-------AGAAAAGCAATAAGGAAACAAGAGGCTGGGG ..x.:.:x.....x:.::..---.:.xx:.........xx.x......x....:..:.:...:-----------::.:..x:.x.:......:...:::..:.........x.............x........x.......::.....:.......................x:xxx......:....::xx.:::.:x.x.:...xx.:...:...:x:..x.----...-------.....:x.....:x..:....:.x....x:--:.x...:...:...:..xxxx.:..xx:..x------:.:...:.....:x......:....:....:..x.:::..x.:.::...-.......-----..:......-------..:....x.:.xx..:..x....:.x..... 20M3I40M11I151M4D3M7I30M2I31M6D49M1D7M5D9M7D31M 259/371 69.8% 394/94230402 0.0% 46/371 12.4% 26090995 NA +3162 chr4 + 190214555 52396683 52396682 52396746 64 AATATTTATGTCTTTTTCTTATTTTCTAATTAAACTGTTTGGGTTTTTTTTTGTTTTTTTTTTT chr4 - 94230402 11962628 11962627 11962691 82267712 82267711 82267775 64 AATGATTAATACTTCCTCTTATTCTGTAAATTATTTGTTTGGGGTTTTTTTTGTTTTTGTTTTT ...:x...xxx...::.......:.x...x.x.x:........x..............x..... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 40434055 NA +3127 chr4 + 190214555 52416065 52416064 52416121 57 ATATATATATATGGGTATATATATGTGTGTGTGTGTATATATATATATATATATATA chr4 - 94230402 81401317 81401316 81401373 12829030 12829029 12829086 57 ATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .......:...x.....:..:..x..........:..x..:.x:....:x..:..:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -28985252 -65245150 +3723 chr4 + 190214555 52490076 52490075 52490268 193 GCAACAATGAAAGAGAAAGAGAAAGGAGAAAGAAGAAAGCG---AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAA--AGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAAA chr4 - 94230402 22272873 22272872 22273068 71957335 71957334 71957530 196 GCATCAAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGG--GGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA ...x...x:.x..:x..:..::x:...:....x.xx:.x.x---....:.:.:..:.:::.::...:.......:xxx.:.:x...xx.:.:.:xx.xx.:::xx....:...x..x...--.:.......:.:.--:..x...x.x......::...:.:.x.....::x.::.xxx:.....x....x.xx..... 41M3I76M2I13M2D61M 114/191 59.7% 196/94230402 0.0% 7/191 3.7% 30217203 NA +3529 chr4 + 190214555 52490084 52490083 52490241 158 GAAAGAGAAAGAGAAAGGAGAAAGAAGAAAGCGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAA chr4 - 94230402 21758901 21758900 21759058 72471345 72471344 72471502 158 GAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA .....:..::...x....::.:...:.::.x:xx.:x:.x..:x.x:x...x..:x.x.:...x.x:x..x:.x:...:..x.x..xx.:::...:.....::.:.:......:.....x.:.x.:::..xxx.::.:.:..xxx.x....:.:.... 158M 89/158 56.3% 158/94230402 0.0% 0/158 0.0% 30731183 NA +3317 chr4 + 190214555 52490118 52490117 52490201 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAGGAAGAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:........:..x::x..xx.:.:.:.::..:.:..x..:.:x......:...:... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 15631824 NA +3793 chr4 + 190214555 52490128 52490127 52490274 147 AAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAA----GAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAG-AGAAAG-------AAAGAAAGAAAAAGAAAGAAAGAAA--AAGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATA chr4 - 94230402 29503819 29503818 29503979 64726424 64726423 64726584 161 AAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAATGTA ...::.:.:...:..:.:.........x:.........:..:...----:x:....:.....:..x.:..x:x.:.x..x.:x...-......-------...xx.x..::..x.:..x..::..--.::...xxx....x..:::.x......::.x:.. 45M4I37M1I6M7I25M2I34M 97/147 66.0% 161/94230402 0.0% 14/147 9.5% 22986309 NA +3962 chr4 + 190214555 52490129 52490128 52490340 212 AAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAGAGA-----------AAGAAAGAAAGAAAAA------GAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 79684109 79684108 79684332 14546071 14546070 14546294 224 aagaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCTATACATAAAGAAAATATAATTACTCCAACCACAGAAATACTGATTTTTATTGGTAGAAAACATAGCAGGGCTTTTTGAGAGAACACCACTGAATGAAAGC-----AAGAGAAGCAAAAACCAGATGAAAGGAAAAAAAGAAGAGACAGATGAAAGAAAAGATGAGAGCTGGGCAAGAAAACAGGAGGG ..........:...:...:...:..:...:...::..::xx.x.x.x.......:x:x..xx.xxxx..xx.x.:.:.x.xx..-----------.::...x.x..x.:::------..:....x:xx.xx...x.....x-----..::....x..:..x:.:.x.....x...:..:....:..x:..x.:...:..:..x.::..xx:..x.:...::x....:.. 84M11I16M6I24M5D83M 127/207 61.4% 224/94230402 0.0% 22/207 10.6% -27193980 -67036422 +3988 chr4 + 190214555 52490134 52490133 52490262 129 AGAAAGAAAGAAAGAAAGAA---------GAAAGAAAGGAAGAAGAAAGAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAA--GAGGAAGAAAGG chr4 - 94230402 89963535 89963534 89963674 4266729 4266728 4266868 140 AAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAAAAATCGAAGAGGAAAAG .:..:..:.....::x.:..---------..:.:.x..xx.........:x.:......xx.......x::...x.......x::.x..x.:.:.:x..xx:x:...::.....:...:x..:...--..:..:....:. 20M9I97M2I12M 85/129 65.9% 140/94230402 0.0% 11/129 8.5% -37473401 -56757001 +3383 chr4 + 190214555 52490149 52490148 52490252 104 AAGAAGAAAGAAAGGAAGAAGAAAG----------AGAAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAG----AGAAAGAAAGAAAGAAAAAGAAAGAAAGA-AAAAGAAAGAAAGA chr4 - 94230402 11253653 11253652 11253771 82976632 82976631 82976750 119 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGA .........x:.........x..x:----------...x.....:.......:.::..:..:::.x..:..----.x...:.:x::.x.:.....x.:..:.:.-......x...x... 25M10I36M4I29M1I14M 74/104 71.2% 119/94230402 0.0% 15/104 14.4% 41236496 NA +4046 chr4 + 190214555 52490159 52490158 52490301 143 AAAGGAAGAAGAAAGAGAAAGAAAGAGGA------AAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAA---GAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGA chr4 - 94230402 90814937 90814936 90815088 3415315 3415314 3415466 152 AAAGGGTGGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGA .....:x.::..:.....:...::x:...------.x.::..::...x:.....:...x.........:::.xxxxxx.....:...x.:...xx:..x.....---........x.:::xx.x:..x....:x.:.:x.....:....:.. 29M6I69M3I45M 92/143 64.3% 152/94230402 0.0% 9/143 6.3% -38324778 -55905624 +3635 chr4 + 190214555 52490163 52490162 52490296 134 GAAGAAGAAAGAGAAAGAAAG-------AGGAAAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGA-------GGAAGAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGG chr4 - 94230402 89963534 89963533 89963675 4266728 4266727 4266869 142 GAAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAA------AAATCGAAGAGGAAAAGG ...:.:..:...:..:x...:-------.x..:.:.x..xx.........:x........xx::..::.x...::x.......x:..x..x.:.:.:-------........:..::...x...------...x::....:.:..:.. 21M7I69M7I20M6D18M 86/128 67.2% 142/94230402 0.0% 20/128 15.6% -37473371 -56757031 +3720 chr4 + 190214555 52490172 52490171 52490304 133 AGAGAAAGAAAGAGGAAAGAAAGGAAGAAGAAA--GAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGAAGG chr4 - 94230402 91538021 91538020 91538155 2692248 2692247 2692382 135 AGATAAAGCAGAATCCTGGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGG ...x....x.::.xxxx:..:..x......:..--..x:..........x.........:.x:x.xx.x..:x::..:.x.x..:......x.::..xx:.xxx:....x..x...x.:......:.:.:.:... 33M2I100M 85/133 63.9% 135/94230402 0.0% 2/133 1.5% -39047849 -55182553 +3217 chr4 + 190214555 52490176 52490175 52490267 92 AAAGAAAGAGGAAAGAAAGGAAGAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAA chr4 - 94230402 10903378 10903377 10903469 83326934 83326933 83327025 92 AAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ..:..:.:..:.....x..:..:.x.x.....x::::xx...x......:........:::.xx.:.:.:.x.....x.:x...x::.:... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 41586798 NA +3345 chr4 + 190214555 52490206 52490205 52490324 119 AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAA------GAAAGGAAGAAAGAAATAAAAGAAAGTAAAGAAGGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAA--TGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:...........:::::..:.....:.xx:x....:..x..------:.:.x:....xx......:.....--.:.:...::..:.::.::.x:xx:.:.....::.:.:x..:. 51M6I24M2D42M 73/117 62.4% 123/94230402 0.0% 8/117 6.8% 21957042 NA +3576 chr4 + 190214555 52490219 52490218 52490283 65 GAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAGGAAGAAAGGAAGAAAGAAATAAAAGAAAGT chr4 - 94230402 25781763 25781762 25781827 68448576 68448575 68448640 65 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAATTTAAATTAATAGAAGATGGT ............................:.x..:...:..:.::xxx...xx....:....x:.. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 26708456 NA +3268 chr4 + 190214555 52490728 52490727 52490829 102 AAGGAAGGAAGGGTGGGAGGGAGGGAAGGAAGGAAGGGAGGGAGGGAATGAGGGAGGAAGGCAGGAAGGCAGGGAGGGGAGGAGGGAAGGAGGGAGGGAGGA chr4 - 94230402 1000425 1000424 1000524 93229879 93229878 93229978 100 AAGGTAGGAGGGGTGGGAAGCAGGGAAGGGACGGAGGATGGCACGGGGTGGCCTAAAAAGTCCGTGGGGGGCACAGAGGGTGAGGGATG--GGGATGGAGGA ....x....:........:.x........:.x.:...:x..x.x..::..:xxx.::...x.x.x::..x:x:x..:..:x......x.--....x...... 89M2D11M 66/100 66.0% 100/94230402 0.0% 2/100 2.0% 51490303 NA +3276 chr4 + 190214555 52524482 52524481 52524581 100 AAAATAAAGGGATAGAGGAAGATCTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGGGTT chr4 - 94230402 66946909 66946908 66947005 27283398 27283397 27283494 97 AAACTCAAGTGACAATGCAA---CAACCTAATAAGTAACAAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTT ...x.x...x..:.:x.x..---.x...x.::..:.::x........x:...x.x........:...:........:.::.:..x.:x:...:...:x.. 20M3D77M 65/97 67.0% 97/94230402 0.0% 3/97 3.1% -14422427 -79807975 +3286 chr4 + 190214555 52528315 52528314 52528407 93 CTTAAAGTCTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA-GAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858283 36858282 36858376 57372027 57372026 57372120 94 CTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.x.:.x.......x.:xx..x.....x...::...:.........:.x..x.:xx...-.:.:...:.:..x..::.x..::.......:. 61M1I32M 63/93 67.7% 94/94230402 0.0% 1/93 1.1% 15670032 NA +3045 chr4 + 190214555 52528371 52528370 52528474 104 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 54827386 54827385 54827489 39402914 39402913 39403017 104 AGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAA .....:....:.x.......::.x...x....xxx.:xx.x:..x.:x::...:.::.x..x:.x..xx.:..:..::..:.:...x....:...:...::x.. 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% -2299015 -91931387 +3167 chr4 + 190214555 52528371 52528370 52528474 104 AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 54828363 54828362 54828466 39401937 39401936 39402040 104 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAA .....:....:.x........:.x...x....xxx.:xx.x:..x.:x::...:.::.x..x:.x..xx.:..:..::..:.:...x....:...:...::x.. 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% -2299992 -91930410 +3860 chr4 + 190214555 52528373 52528372 52528499 127 AAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA---GAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGG------GGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAA--GAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ...x......:..........::.:.------:..:.......xx.x:.:....x....:---:.:.x.....xx....x....--:..x:.:....:.....:.:..x:xx:.....:.:..:..x... 26M6D28M3I21M2D44M 83/119 69.7% 122/94230402 0.0% 11/119 9.2% 21995209 NA +4058 chr4 + 190214555 52528400 52528399 52528554 155 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAG------AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAA chr4 - 94230402 21758891 21758890 21759058 72471345 72471344 72471512 168 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA ..:::..xx......::..::..x...::......::.------..x..x.::x.x:x...x..:x.x.:...x.x:x..x..x.:.....-------.......:........:.:....:.:...::x..:x......xxx....:.:.:xxx.x....:.:.... 38M6I47M7I70M 99/155 63.9% 168/94230402 0.0% 13/155 8.4% 30769509 NA +3362 chr4 + 190214555 52528406 52528405 52528519 114 GAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAA---AAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 91538039 91538038 91538155 2692248 2692247 2692364 117 GAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGG ..:..x.....:....x:.x.:.:.:.....x.......:...x:x.xx.x...x.::...x.x.........x:::..xx:.xx......x.---..x:..:::.:..:...:.:. 93M3I21M 73/114 64.0% 117/94230402 0.0% 3/114 2.6% -39009633 -55220769 +3516 chr4 + 190214555 52528410 52528409 52528538 129 GAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAG chr4 - 94230402 91538039 91538038 91538162 2692241 2692240 2692364 124 GAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGAC---TAATCAGAAAGCAATTAATGGAGGAAG--AGGAAGGAGGCACAGAG ..:..x.....:....x:.x:..........x.........:.x:x.xx.x...x.::...x.x.........x:::..x---x..xx.:....x..xx..x::..:...--..:...:.:.x.x.... 80M3D27M2D17M 83/124 66.9% 124/94230402 0.0% 5/124 4.0% -39009629 -55220773 +3841 chr4 + 190214555 52528413 52528412 52528555 143 AGAAAGAAAGAAAGAAAAGAGAAAGAA---AGAAAGAAAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAA---AAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAAGAGAAAGAAAGAAAGAAAAA chr4 - 94230402 29503818 29503817 29503975 64726428 64726427 64726585 158 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAA .:.....::...:..............---......:....:...-------:....:....:.:.x:...x:x..:x:.x..x:.:x......:x.---...:xx.x:.:...x::.:x......--.....:xxx....x..:::.x:.....:.. 27M3I15M7I45M3I26M2I30M 96/143 67.1% 158/94230402 0.0% 15/143 10.5% 23024595 NA +3132 chr4 + 190214555 52528414 52528413 52528546 133 GAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAG chr4 - 94230402 91538039 91538038 91538162 2692241 2692240 2692364 124 GAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAAT---GGGGACTAATCAGAAAGCAATTAATGGAGGAAG------AGGAAGGAGGCACAGAG ..:..x.....:....x..x::.........x...:.:...:.x:x.xx.x...x.::...x.x.........x---:.::.xx..xx......x..xx..x::..:...------..:..:...:x.x.:.. 74M3D33M6D17M 81/124 65.3% 124/94230402 0.0% 9/124 7.3% -39009625 -55220777 +3863 chr4 + 190214555 52528428 52528427 52528550 123 AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:...........:::::..:.......xx.x:.:....x..:::xxx....x..::.xx:...x....::.x::::.:...:.:.....:x.xx::..::..:..:..x.... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% 21995264 NA +4036 chr4 + 190214555 52528435 52528434 52528570 136 AAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--------AAAGAAAGAAAAGAAAGAAAAAAG-----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAA chr4 - 94230402 44053989 44053988 44054137 50176266 50176265 50176414 149 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA .....x.:.:..:.......::...:.::x......:x::.:.:.--------:..........::.:.x.....x.-----......x::..::..x..x.x..:.:x.::x:..x....:.......:.:.:x.:x..:.x.:.:.. 45M8I24M5I67M 87/136 64.0% 149/94230402 0.0% 13/136 9.6% 8474446 NA +3159 chr4 + 190214555 52528437 52528436 52528520 84 GAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..:.:.x..xx..x.....x...::...:.........:.x..x.:xx..::::....:..::.x..::.x..::.......:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 15670144 NA +3048 chr4 + 190214555 52528438 52528437 52528495 58 AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ...::x...........:...:.......:..xx:..:x....:..::..::...... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 44817089 NA +4012 chr4 + 190214555 52528442 52528441 52528560 119 AAAGAAAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAAGA--AAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:..........::.--:..:.......xx.x:.:....x....:--x.::.x.....xx....x.:.::..x:.:....:.....:..:.x.xx.:..:::...::..x.... 24M2I28M2I67M 80/119 67.2% 123/94230402 0.0% 4/119 3.4% 21995278 NA +3875 chr4 + 190214555 52528443 52528442 52528621 179 AAGAAAAAGAAAGAAAGAAAGAAAGA-----------AAGAAAGAAAGAA-AGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 22272878 22272877 22273068 71957335 71957334 71957525 191 AAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA .....x.:.x...:...x::....:.-----------.x:.:.......:-...:......:........xxx::.:x...xx.:::.:xx:xx....xx::..:...x..x:..xx.....:...:.:.::.x...x.x.:.:.::....:.:.x.....::x..::xxx..:..:x....x.xx..... 26M11I13M1I140M 108/179 60.3% 191/94230402 0.0% 12/179 6.7% 30255565 NA +3342 chr4 + 190214555 52528444 52528443 52528524 81 AGAAAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x..--..x.....x...::...:.........:.x..x.:xx....::....::.:..x..::.x..::.......:. 8M2I73M 57/81 70.4% 83/94230402 0.0% 2/81 2.5% 15670150 NA +3381 chr4 + 190214555 52528445 52528444 52528528 84 GAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..:...x.:xx..x.....x...::...:.........:.x..x.:xx....::.:...:.:..x..::.x..::.......:. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 15670152 NA +3843 chr4 + 190214555 52528446 52528445 52528568 123 AAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.::...:.:.:.xx:x.....::x.:.::xxx:.:.x.....xx....x.:.::..x:.:.....:.::.::...x.xx.:...:..:..:..x.... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% 21995282 NA +3017 chr4 + 190214555 52528450 52528449 52528532 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x.:x.:xx...:::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 15670156 NA +4533 chr4 + 190214555 52528469 52528468 52528617 149 AAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAA-AGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGA--GAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .....x.:.:..--............:..:.x......:x::.:.:.x::.xxxx:..........::...x.:...x:..x.x......-........x:.x:x.:..:x:::x::.x....:.......:.:::x..x:...x..... 12M2D76M1I59M 95/147 64.6% 148/94230402 0.0% 3/147 2.0% 8474480 NA +4016 chr4 + 190214555 52528479 52528478 52528621 143 GAAAGAAAGAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-----AAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAA-AGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ...::.x:..::..........:.:::...x.::..:.x:.::..:x:.:-----......::.::....x.:...x:..x.x......-........x..x:x.:..:x:::x::.x....:.......:.:::x..x:...x..... 50M5I34M1I59M 88/143 61.5% 149/94230402 0.0% 6/143 4.2% 8474491 NA +3138 chr4 + 190214555 52528487 52528486 52528584 98 GAAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAA chr4 - 94230402 10862979 10862978 10863076 83367327 83367326 83367424 98 GAATAGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACAAAACAGAGAAGAAAGGAAGAGACAAAACAAA ...x.....:......:...:....::x.::....x:...:x..x..xx..:..x.x:xx.x.x.x...:x.:::.......:..:...x.:..x:.. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 41665508 NA +3219 chr4 + 190214555 52528514 52528513 52528608 95 AGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ......:.::..::.....x.::.:..x.x.....x::.:xx...x......:.:.:....:::.xx.......x.:.:.x::x...x:..:... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 41625139 NA +3352 chr4 + 190214555 52528518 52528517 52528612 95 AGAAAGAAAGAAAGAAAAGAGAAAGAAA-GAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGA-GAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ......:.-...........x.:.:...-.x.....x.:::xx...x......:........:::.xx.......x.:.:.x::x...x:..:... 8M1D19M1I67M 66/94 70.2% 95/94230402 0.0% 2/94 2.1% 41625143 NA +3661 chr4 + 190214555 52528529 52528528 52528682 154 AAGAAAAGAGAAAGAAAGAAAGAAAAAGA------AAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAA--------------GGAAGGAAGGAAAGAAAGAAAGAGAGAGAA chr4 - 94230402 65242461 65242460 65242634 28987769 28987768 28987942 174 AAGAAAGGACAAAAAAAAAAAAAGAAAGATGTGCTAATACTCAAGTCAAGAGGATAAAGGAAGGTAAGAAAGTGAGATGAAGTGAGAAAGAGAAAAAATAAAACAGGTAAGTTAAAAAGGTAGGTTGTAACTTTGTGATGTTGCATAATGAAGTAAAAATGGAAACAAAAAGGA ......:..x...:...:...:.:.....------..x.xxx..:xx..:..:.x:..:...:.x.......x:...x::.:x..:.:.:.....:..x:...x.::x...xx.::....x...xx.x..--------------:x..x....x...:.x:....x.:.:..:. 29M6I95M14I30M 98/154 63.6% 174/94230402 0.0% 20/154 13.0% -12713932 -81516470 +4067 chr4 + 190214555 52528533 52528532 52528657 125 AAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAG--AGGAATAAAG ...x.:....:...........:::::..:.......xx:x....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx....:.:..--.....x:... 113M2D10M 79/123 64.2% 123/94230402 0.0% 2/123 1.6% 21995369 NA +3850 chr4 + 190214555 52528547 52528546 52528674 128 AAAGAAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGAC--AAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGA---AAGGAGAGGAATAAAG ...x......:..........::.:::..:.......xx.x:.:....x..:::xxx....x--.....xx....x.:.::..x:.....::..:..:::..x:xx...---.....:..:..x.... 62M2D45M3D16M 81/123 65.9% 123/94230402 0.0% 5/123 4.1% 21995383 NA +3447 chr4 + 190214555 52528565 52528564 52528693 129 AAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGAGAGAAGAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGG--GGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACA-AAGACCGAAATAGAAGAATGAGGAAAAAAAG---AGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:..........::.:.--:..:.......xx.x:.:....x..:::xxx....x.-...:xx.:..x::.:...x..:.:..::...---.....:x.xx:..:..:.......x:... 26M2D37M1D31M3D29M 81/123 65.9% 123/94230402 0.0% 6/123 4.9% 21995401 NA +3093 chr4 + 190214555 52528589 52528588 52528671 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x..xx.::::.::.:.:....x:.:::x...:.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 15670295 NA +3855 chr4 + 190214555 52528642 52528641 52528724 83 GAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGAGAGAAGAGGAAGGAAGGAAGGAAGGAAATAGAT--ATGCATTCATTACT chr4 - 94230402 48273072 48273071 48273156 45957247 45957246 45957331 85 GAAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAATCCATGTATTTATTACT ......::...x.....::.x.......::x..x..x...:x..:.....:.:.:.:..:....x.:..--...:...:...... 69M2I14M 60/83 72.3% 85/94230402 0.0% 2/83 2.4% 4255570 NA +6893 chr4 + 190214555 52535357 52535356 52535487 131 ATATATATATATACACACACACATATGTGTGTGTGTATATATGTGTAAACATATGTGTATATATGTATATATACACACATATATAATTATATATTTTATATATAAT-TATATATAATAAATTATATATGTAA chr4 - 94230402 49987095 49987094 49987218 44243185 44243184 44243308 124 ATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatatatatatatatatacacacacacac-------attatatatattatatattatatatatat-atacattatatatataA .......:.:.x...........:.:..........:.:.x......x.:....:.:.......:..:.:.:......-------.........x........x..-.......-...x.........:... 78M7D21M1I7M1D17M 103/123 83.7% 124/94230402 0.0% 9/123 7.3% 2548262 NA +3918 chr4 + 190214555 52574594 52574593 52574688 95 ATTTGGTCCTCACAACAACCCTATGC---------CAATTATCACCTCCATATTACAGAAGCGAATACTGAGGCACCAAGAAGTTAAATAACTTGTCCAAGGTC chr4 - 94230402 10729160 10729159 10729262 83501141 83501140 83501243 103 ATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....:.-........:.x....:..x---------:x.:.....x......x......:x.x...x..........xx.x.:.....:...:...:...::... 6M1D19M9I69M 71/94 75.5% 103/94230402 0.0% 10/94 10.6% 41845434 NA +3017 chr4 + 190214555 52584600 52584599 52584663 64 ACAGATGAATGGATAAATACATGTCATATATATATATATGTATATATACATATATACATATATA chr4 - 94230402 50291210 50291209 50291271 43939132 43939131 43939193 62 ACAGA--AGTAAATAAACACACTTTGTATTTCCATATGTGCATATATACATATGTATATATACA .....--.:.::.....:...:x.::...x.x:....:..:............:..:.....:. 5M2D57M 46/62 74.2% 62/94230402 0.0% 2/62 3.2% 2293390 NA +6383 chr4 + 190214555 52594215 52594214 52594432 218 AGAGGCAGGGTGTTAAACTGATTAAAATTTCACAAGATTGACATTATTGCTTAAAGTGCTTGAATTGGTTACATTTTAAAAAATTAAGGTACAGATTATTTTAAATA-AAAACTACAATATTTTTAGCAAC-AAAATAATAGGAATGCCACACAAATACAGTAACTATTTTGGTTATACAGAAATGGAAGCCAAAAATAAATTAATGTAATACTGGAAAA chr4 - 94230402 26337147 26337146 26337341 67893062 67893061 67893256 195 AGCAGCAAAGTGCTAAGCTGATTGGAATTCCACAAGATTGACACTGATGCTTAAAGTGCTTGAGTTGTTTACA-TGTAAAAACTCAAAGTACATAAAAATTAAAATACAGAACT--AATAATATTAACTGCTTAAATGATA--------ATACAGATACATTAAC------------AGAGCAACAAAAA--AGAAATAAATTAAAACAGAATTTGATAA ..x:...::...:...:......::....:.............:.:x................:...x.....-.x......x.:..:.....x.xx.x..x.....-.:....--....x.x...:.x:.-x....:...--------.:...:.....x....------------.x..x..:::..:--.:...........x::.:x.:.x..x.. 73M1D33M1I6M2D15M1I9M8D16M12D13M2D28M 144/193 74.6% 195/94230402 0.0% 27/193 14.0% 26257068 NA +10707 chr4 + 190214555 52597395 52597394 52597831 437 GCAACCGTTATTC-ATATAAATCAGACTACAATCTGATTGCAGTTAACT-CTATGTCAGACTGAAATAAAACCAAGAGT------------------AGTGCTGCATGTAAAAACACAAAAGGAGAGAGTCTAACACAGCCAGACCATT----GAGACTCGGAGTGATACCATTAGTGGGCCACTGGGGAAGAGGAAAGCCTGCGGAGAAGCCGGGTGACAGTGCTGTGAACATTCTCCCCACGTGAAT---------CAGTC-CCGCAGGTCTTTCAGTTACTCTCTTGACTGATAGAATAAAATATATCCAGATTCTGAATTTTTTGATATATCTGACGTCAGGCCATAGAATTCTTCAATAGCTTGAGCATCTATTTTCTGCAATAAAGGAGAAAGAAAACAACACAATTACTTAACATGATTCCTGGGGAAAGGAAATAAAAACTAATGGAATATATATTAAAATGC chr4 - 94230402 26340909 26340908 26341352 67889051 67889050 67889494 444 GTAAATGTTATTCCATATAAATTCCACTAAAATCTGACTGCAGTCAACTTCTCAATCAGACTTAAAAACAACAAACTATCCTCTCCTCCTGAAAGAAAGTTCTGTATGTCAAAA-ATGAACAGTTATGGTCAATATCACATAAGCCATTTAATGAGAGATGGGATATATCCATTTTTCAACCATACAAGATGAGA----TCTTTTTAAAAGTCAGTTCAGTGGGCCATCACCTTCTTTGCCTGCAGAGTTGTTGTGTGCAGTTGTCACAGTTTCCCAAGTCACTCTCTTGACTGGTAGAATAAAATATAACCAGACTCTGAATTTTTTGATATATCAGAGGTCAGTCCATAAAATTCTTCAATAGCTTGAGCATCTATTTTCTGTA-------------AAATAAATAGAATCAATTAACGT-ACTGCTAAGTAAAAGAAATGCCA--------AGCATAGATTAAAAAGC .:..x:.......-........:xx....x.......:......:....-..xx:.......x...x.x...x..xx:.------------------...x...:....x....-.::..x:.xx.x:...x.xxx..xx:.::.....----....xx:..::.:xxx.....xx.x::...:xx::..x...:----:..x:xx.:...:.:.x.x.xx.x..::.x.x.x.::.:x..xxxx..:.---------....:-:.:...x.::::x...:.............:..............x.....:....................x..x.....x.....:................................:.-------------...xx..:.x...:.x.....:.-.:.x..::.x...:.....:xx.--------.::...x.......x.. 13M1I35M1I29M18I17M1D34M4I42M4D50M9I5M1I122M13D23M1D23M8D17M 285/410 69.5% 444/94230402 0.0% 61/410 14.9% 26256486 NA +7497 chr4 + 190214555 52597633 52597632 52597762 130 CTTTCAGTTACTCTCTTGACTGATAGAATAAAATATATCCAGATTCTGAATTTTTTGATATATCTGACGTCAGGCCATAGAATTCTTCAATAGCTTGAGCATCTATTTTCTG-CAATAAAGGAGAAAGAAA chr4 - 94230402 81862008 81862007 81862138 12368265 12368264 12368395 131 CTTTGTCTTAGTCTCTTGACTGGTAGAAGAGGATATATCCAGATTCTGAGTTTTTGGAAATGTCTGATGTAAGCCCATAGAACTCTTCAATGGCCTGAGCATCGATTTTCTGAAAATGAATGAGAGGTAAA ....xxx...x...........:.....x.::.................:.....x..x..:.....:..x..x........:........:..:........x........-x...:..x....::x... 112M1I18M 105/130 80.8% 131/94230402 0.0% 1/130 0.8% -29264375 -64966027 +7511 chr4 + 190214555 52598615 52598614 52598725 111 TCTGCAAACCAACCTCTACAATGTCATCATCAAACAAAAGCCAGAAGCCGTGACTTTTCACAATAGTGATATAATGCCCACGATTAGGACCACTGGAAAAGAACAAATAAA chr4 - 94230402 26342298 26342297 26342406 67887997 67887996 67888105 109 TCAGCATACTGACCTCTACAATGTCATCATCAAACAAGAGCCAAAATCCATGACTTTTCACAATAGTAATATAATGCCCACGATTCGGTCCACTGAAAAGG--TAAATGAA ..x...x..::..........................:.....:..x..:.................:.................x..x......:...:.--:....:.. 101M2D8M 94/109 86.2% 109/94230402 0.0% 2/109 1.8% 26256317 NA +7073 chr4 + 190214555 52598618 52598617 52598754 137 GCAAACCAACCTCTACAATGTCATCATCAAACAAAAGCCAGAAGCCGTGACTTTTCACAATAGTGATATAATGCCCACGATTAGGACCACTG-GAAAAGAACAAATAAAAGGCAGTTAGCAAGTTAACATTTATCTCT chr4 - 94230402 81866838 81866837 81866967 12363436 12363435 12363565 130 GCATACCTACCTCTACAATGTCATCATCAAACAGCAACCAAAAGCCATGGCTCTTCACAATGGTGATATAATGGCCACGATTTGGACCACTGCCAGAAGAATAAAAGAGAAG--------GATCAAACACTTATCACT ...x...x.........................:x.:...:.....:..:..:........:...........x........x.........-x.:.....:...x:.:.:.--------:.x:x....:.....x.. 92M1I19M8D18M 104/129 80.6% 130/94230402 0.0% 9/129 7.0% -29268220 -64962182 +13390 chr4 + 190214555 52601852 52601851 52602069 218 CTTACCTGCCACAGTGAACGACCACCGCAACCAAGTCATACATGCGGTCCAGGTTCACTGCATCACTGGAGGTGTTGAAGAGCCGGAGTTCCAGAGGGAAGACCACACGGTAAGACAGCTTGGTGTATCTGTGCAGCTGCTCCATGTACTTGAACCGCTTTAGGTGCAGGGCCAAGATCATGGGCAGCTTTTTTACCCTCATCCTAAGAAACC--AAGAA chr4 - 94230402 26343229 26343228 26343448 67886955 67886954 67887174 220 CTTACCTTCCACAGTGAACAACAACAGCTACTAAGTCGTACATCCGGTCTAAGTTGACAGCATCACCAGACGTATTGAAGAGACGTAATTCCAGGGGAAATACTACACGATAAGACAGCTTAGTATACCTGTGCAATTGCTCCATGTACTTGAATCTCTTGAGGTGTAAGGCAAGAATCATTGGTAGCTTTTTTACTCGCATCCTGTGAAACCGTAAGAA .......x...........:..x..x..x..:.....:.....x.....:.:...x..x.......::..x..:........x..x.:......:..:..x..:.....:...........:..:..:.......::.................:.x...x.....:.:...x.::.....x..:...........:.x......:x......--..... 213M2I5M 175/218 80.3% 220/94230402 0.0% 2/218 0.9% 26258623 NA +12728 chr4 + 190214555 52601854 52601853 52602072 219 TACCTGCCACAGTGAACGACCACCGCAACCAAGTCATACATGCGGTCCAGGTTCACTGCATCACTGGAGGTGTTGAAGAGCCGGAGTTCCAGAGGGAAGACCACACGGTAAGACAGCTTGGTGTATCTGTGCAGCTGCTCCATGTACTTGAACCGCTTTAGGTGCAGGGCCAAGATCATGGGCAGCTTTTTTACCCTCATCCTAAGAAACCAAGAAATA chr4 - 94230402 81868760 81868759 81868976 12361427 12361426 12361643 217 TACCTGCCACAGTGAACAACTACAGCCACAAGGTCATACATTCTGTCAGGATTTGTAGCATCTCCTGACGTGTTAAAAAGCCGGAGCTCCAAGGGAAAGACAACACGGTAGGAGAGTTTGGTGTATCGATGCAGCTGGTCCATGTATTTGAACCTTTTTAAGTGCAGAGCTAGAATCATGGGCAACTTTTTCACTCTCATTCT--GAACCACAGAAATA .................:..:..x..x..x.:.........x.x...x:.:..:::x.....x.:x..x.....:..:........:....::..:.....x........:..x..:..........x:........x........:.......x:....:......:..:.::..........:......:..:.....:..--...x.xx....... 203M2D14M 170/217 78.3% 217/94230402 0.0% 2/217 0.9% -29266906 -64963496 +7491 chr4 + 190214555 52604462 52604461 52604602 141 CACCACACAAAGATAACCCTGAGCTAAATCTTTACCTACCTTTTCTGGGCTTCTTGTTTGCTGCAGCATGTTTCACAATAATATTTTTGTTCACTACACAGTGTTTCTGTGTTGCTGAAGTCTCTGTAGAGGAAAATATTT chr4 - 94230402 26343685 26343684 26343819 67886584 67886583 67886718 135 CAACATATTGAAACCACCCTGC------TCTTTGCTTACCTTTTCTGTGCCTCTTGCTTACTGCAGCAGGTTTCACAGTAGTATTTCTGCTCACTACATAATGTCTCTGTGTTACTGAAGTCTCTGTAAGTAAATACAATT ..x..:.:x:.:.:x......x------.....:.:...........x..:.....:..:........x........:..:.....:..:........:.:...:........:..............::x:..x.:.x.. 22M6D113M 104/135 77.0% 135/94230402 0.0% 6/135 4.4% 26260777 NA +5616 chr4 + 190214555 52604474 52604473 52604598 125 ATAACCCTGAGCTAAATCTTTACCT-ACCTTTTCTGGGCTTCTTGTTTGCTGCAGCATGTTTCACAATAATATTTTTGTTCACTACACAGTGTTTCTGTGTTGCTGAAGTCTCTGTAGAGGAAAAT chr4 - 94230402 81869591 81869590 81869713 12360690 12360689 12360812 123 ATGAGCCTGA---ATATTTTAACCTTACCTCTTCTGTGCTTCCTGTTTACTGCGGCACTGCTCACAATAGTACTTATATTCACTGCACAGAGTTTCAGTATTACTAAACCCTCTGAAAATAAAAGT ..:.x.....---.x..:..x....-....:.....x.....:.....:....:...:xx:........:..:..x.:......:.....x.....x..:..:..:..x:.....x.:.x:...:. 10M3D12M1I100M 91/122 74.6% 123/94230402 0.0% 4/122 3.3% -29265117 -64965285 +6842 chr4 + 190214555 52610532 52610531 52610638 107 TTCATATACCTTAGACAGTGGGTAATGGATGTATTCTGCTCCACATCAACAGAAAGGTCAAGAAAATCTTCATCTTTGCTACTAACCTGAAACAAAAAACAGAAACA chr4 - 94230402 81870526 81870525 81870630 12359773 12359772 12359877 105 TTCATTTACCTCAGACAGTGTGTAATTGATGTATTTTGTTCCACATCAACCGATAGATCCAGAAAGTCCTCATCTTTGCTACTAACCTTGA--AAAAAAGAGAAACA .....x.....:........x.....x........:..:...........x..x..:..x.....:..:...................x:.--......x....... 91M2D14M 90/105 85.7% 105/94230402 0.0% 2/105 1.9% -29259994 -64970408 +8284 chr4 + 190214555 52610532 52610531 52610632 101 TTCATATACCTTAGACAGTGGGTAATGGATGTATTCTGCTCCACATCAACAGAAAGGTCAAGAAAATCTTCATCTTTGCTACTAACCTGAAACAAAAAACA chr4 - 94230402 26344567 26344566 26344667 67885736 67885735 67885836 101 TTCATTTACCTTAGACAGTGTGTAATTGATGTGTTCTGCTCCACATCAACAGAAAGGTCAAGAAAATCTTCATCTTTGCTACTAACCTGTAGCAAAAAATA .....x..............x.....x.....:........................................................x.:.......:. 101M 94/101 93.1% 101/94230402 0.0% 0/101 0.0% 26265965 NA +3110 chr4 + 190214555 52616448 52616447 52616526 79 CTGCAACCTCCGCCACCTGAGTTCAAGTGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGAATTAGAGGCATGGGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x.x:...:.........x...x::x.x........::.............:..x.--.:..x:.... 67M2D10M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 34419322 NA +13030 chr4 + 190214555 52625980 52625979 52626261 282 GAACATGCGAGCTACATAAGAGCTCC-------CCTAGTACTTACAGTTTCACAGTTCAAGCATCGAGTTTCATTGGTAAGCGTTCCCTGAAAAATCTCATGGACCCAGGTGAGTTCTGGTTTATTATTTTCCGCAGGTTCGTTCATGTTGCCATTTTTTAATTTTCCATTTTGTTTTTCCTGTTTCTTCTCCTCCTGAAGGATGTCCGCAATAGTGTTTAGCAAATAATTTAAAAATTCATGAGCATCCTGCTGCATGTAGTTATCAAAGAGATCTGGAAAGGAGAAG chr4 - 94230402 81871599 81871598 81871884 12358519 12358518 12358804 286 GAACTTGTGAAAAATATAAGAGATTTGGTTTTGTTTTAAACGTACAGCCTCACAGTTAAGACATCTGGTTTCATTGGTTAGTGTTCCTTGGAAGATTTCATGGACCCACGTCAGATCAGTCTTGTCTCCTTCTTCACTTTCA---ATGCTGCCATTCTGGAGTTTGCCATTCTGCTTCTCCTGCTTTTTCTCTTCTTGTAGCAAGTCAGCAATAGTGTTAAGTAGGTAGTTTAGGAATTCATGTGCATCCTGCTGCATGTAATTATCAAACAATTCTGAAAAGGAAGAG ....x..:..:xx.:.......x.::-------::.x:x..x.....::........x.::....x:...........x..:.....:..:..:..:...........x..x..x..x.x:..:.:x::...:x..xx...:---...:.......:.xx.:...x.....:..:..:.....:..:.....:..:..x..x.x...x...........x..:.::..:....::........x.................:........x.:x....:......::.. 26M7I109M3D144M 203/279 72.8% 286/94230402 0.0% 10/279 3.6% -29245619 -64984783 +18861 chr4 + 190214555 52625997 52625996 52626272 276 AAGAGCTCCCCTAGTACTTACAGTTTCACAGTTCAAGCATCGAGTTTCATTGGTAAGCGTTCCCTGAAAAATCTCATGGACCCAGGTGAGTTCTGGTTTATTATTTTCCGCAGGTTCGTTCATGTTGCCATTTTTTAATTTTCCATTTTGTTTTTCCTGTTTCTTCTCCTCCTGAAGGATGTCCGCAATAGTGTTTAGCAAATAATTTAAAAATTCATGAGCATCCTGCTGCATGTAGTTATCAAAGAGATCTGGAAAGGAGAAGGTGGTTATTTC chr4 - 94230402 26348413 26348412 26348688 67881715 67881714 67881990 276 AAAATCTATCCCAATGCTTACAGTTTCACAGTTCAAACATCTAGTTTCGTTAGTCAGTGTTCCCTGAAAAATCTCATGCACCCAGGTGAGTTCTTGCTTATTGTTCTCTTCAGCTTCGTTCATGTTGCCATTTTTCAGTTTCCCATTTTGCTTTTCCTGTTTCTTCTCCTCCTGCAAAATGTCGGCGATTGTATTCAGCAAGTAATTTAAAAACTCATGTGCATCCTGCTGCATGTAGTTGTCAAAGAGATCTGTGAAGAAGAGAGTCAAGATTTC ..:.x..x:..:.:.:....................:....x......:..:..x..:....................x...............x.:.....:..:..:x...x.....................:.:...:........:.......................x.::.....x..:..x..:..:.....:...........:.....x....................:.............x:...:...::..x:xx..... 276M 230/276 83.3% 276/94230402 0.0% 0/276 0.0% 26277584 NA +12441 chr4 + 190214555 52627944 52627943 52628183 240 ACTCACCATTCTCTTTTCTCAGCCTTGAAATGAACTTCTTTGGTGGGATGACGCCAACCTTCTTCTTCTGTGTGGCAATGCTGTGGAAAAGGTCCGCCAGGCACGTCAGCAAGTTTTCCTTCTTCTTTTGCTGGGCCTTGTATGCCAACACATTCTCCCGGAATGGACGGCAGAAGTACAATGCCTGAAGCACGGAGTTACAGTAGCATGTGTTTCCAAACTGCC----AAGGGACAAGAGGGA chr4 - 94230402 81872821 81872820 81873064 12357339 12357338 12357582 244 ATTTACCATTTTCTTTCCTCAATCGGGAAATAAATTTCTTGGGTGGGATGACTCCCACCTTCTTCTTTTGGGTAGCAATACTGTTGAAGAGATCAGAGAGGCATGTCAGGAGGCTTTCCTTCTTTCGAGGCTGCACTTTGTATGCCAGAACTTTTTCCCGAAATGGACGACAAAAATAAAGTGCCTGCAAGACTGAGTTGCAGTAGCAGGTATTGCCGAACTGGTTAAAACAGAACAAAAGGAA .:.:......:.....:....::.xx.....:..:.....x...........x..x...........:..x..:.....:....x...:..:..x.xx.....:.....x.:.:..........::xxx....x:.:..........:x..x..:.....:........:..:..:..x.:......x.:x..x.....:........x..:..x..:.....x:----.x:.:....:...:. 225M4I15M 179/240 74.6% 244/94230402 0.0% 4/240 1.7% -29244877 -64985525 +16595 chr4 + 190214555 52627944 52627943 52628169 226 ACTCACCATTCTCTTTTCTCAGCCTTGAAATGAACTTCTTTGGTGGGATGACGCCAACCTTCTTCTTCTGTGTGGCAATGCTGTGGAAAAGGTCCGCCAGGCACGTCAGCAAGTTTTCCTTCTTCTTTTGCTGGGCCTTGTATGCCAACACATTCTCCCGGAATGGACGGCAGAAGTACAATGCCTGAAGCACGGAGTTACAGTAGCATGTGTTTCCAAACTGCCA chr4 - 94230402 26350301 26350300 26350526 67879877 67879876 67880102 226 ACTTACCATTCTCTTTTCGTAACCTTGATATGAACTTCTTTGGTGGAATAACTCCGACTTTCTTCTTCTGAGTAGCAATACTGTGGAAAAGATCTGCCAGGCAAGTCAAGAGATTTTCCTTCTTTTTCTGTTGGGCCTTGTATGATAACACATTTTCCCGAAATGGCCGGCAAAAGTACAATGCCTGCAGCACGGAGTTACAGTAGCAGGTGTTCCCAAACTGCCA ...:..............x:.:......x.................:..:..x..:..:...........x..:.....:...........:..:........x....:x.::...........:..:..:.............x:........:.....:.....x.....:..............x....................x.....:........... 226M 194/226 85.8% 226/94230402 0.0% 0/226 0.0% 26277643 NA +6487 chr4 + 190214555 52631028 52631027 52631160 133 AACATTTGATGAAAATAATACATTTTACATACTTACATTGACCAATCCGAAATAGTGTTCATTGATTGGAAACTGCTCTGGACCAATGTCTTTTTCCAGAGCAGAGGCATTGGTGCCCTAAAAGAGAAAAATA chr4 - 94230402 81877605 81877604 81877730 12352673 12352672 12352798 126 AGCATTTGAAGCATAGAATATAA-------ACTTACATTGACCAAGCCAAAGTAATGCTCATTCACAGGGAACTGTTCAGGACCAATCTCTTTCTCCAAAGCTGAGGCATTGGCGCCCTGCAAAGAAACAATA .:.......x.x.x.x....:.x-------...............x..:..:..:..:.....x.:x..:.....:..x........x.....:....:...x..........:.....:x..:::..x.... 23M7D103M 97/126 77.0% 126/94230402 0.0% 7/126 5.6% -29246577 -64983825 +8377 chr4 + 190214555 52631057 52631056 52631201 145 TACTTACATTGACCAATCCGAAATAGTGTTCATTGATTGGAAACTGCTCTGGACCAATGTCTTTTTCCAGAGCAGAGGCATTGGTGCCCTAAAAGAGAAAAATAGCAAAAGTTCTGTTGCATGTAAAATAGACAAAAAGTAAAAT chr4 - 94230402 26351162 26351161 26351296 67879107 67879106 67879241 135 TACTTACATTGACCAATCCGAAGTAGTGTTCATTGATGGGAAACTGCTCTGGGCCAATGTCTTTTTCCAGAGCAGAGGCATTGGTGCCCTA----AGGAGAGAGGGAAGAATT------AATGTAAACTATTAAAATCATAAAAT ......................:..............x..............:......................................----..:.:.:x:.x..:.:..------x.......x..xxx...xx:...... 91M4D18M6D26M 116/135 85.9% 135/94230402 0.0% 10/135 7.4% 26279895 NA +3121 chr4 + 190214555 52632003 52632002 52632086 84 GGAAAGGGAAGGCAAGGGAAGGGGAAGGGGAAGGGGAAGGGGAAAGGGAAGGGGAAG--AAGGGGAAAGAGAGGTAAGTGAGGTAA chr4 - 94230402 93115363 93115362 93115448 1114955 1114954 1115040 86 GAAAAAGGAAGGAGATGTAAGGAGATGTTGAAGGGAAATTGGAAAGGGAAAGGGAAGGAAAAGGGCCAGCGAACATAGTAAGAGAA .:...:......x:.x.x....:..x.xx......:..xx..........:......--..:...xx..x..:xxx...:..:x.. 57M2I27M 59/84 70.2% 86/94230402 0.0% 2/84 2.4% -40483360 -53747042 +3730 chr4 + 190214555 52632869 52632868 52633003 135 CAGAGAAAGAAAA-----GGAAGGAAGGAAGGAAGGGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA--AAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGA chr4 - 94230402 91538020 91538019 91538161 2692242 2692241 2692383 142 CAGATAAAGCAGAATCCTGGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGGCACAGA ....x....x.:.-----...::.x.:.......:x..x:..........x.....:...:.x:x.xx.x...x.::...x.x.........x:::..--..xx.::..:x..xx..x.:.:...:..:..:..::x.x... 13M5I80M2I42M 88/135 65.2% 142/94230402 0.0% 7/135 5.2% -38905151 -55325251 +3246 chr4 + 190214555 52632887 52632886 52632953 67 GAAGGAAGGAAGGGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237694 9237693 9237760 84992643 84992642 84992709 67 GAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..:..:.x:x..x.::........:x..x::...:.....:....:....:..:...:....::... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 43395193 NA +4640 chr4 + 190214555 52632896 52632895 52633041 146 AAGGGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGTAAG chr4 - 94230402 44053977 44053976 44054122 50176281 50176280 50176426 146 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAG ......x.x:x:.....x.:.:..........::...:.::x......:x::.:.:.x::.xxxx:.............::x..:..x...x.x...::.x........x:.x:x...::x:.:x:..x.:.::........x:.. 146M 90/146 61.6% 146/94230402 0.0% 0/146 0.0% 8578919 NA +3747 chr4 + 190214555 52632901 52632900 52633006 106 AAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGA-----AAGAAAGAAAG---------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA---GAAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:........:..:::::..:.......-----..:..:x....---------.....xx....x.:.::..x:.:....:.....:.:..x.---....:..:..:..x.... 37M5I11M9I40M3I18M 76/106 71.7% 123/94230402 0.0% 17/106 16.0% 22099737 NA +3015 chr4 + 190214555 52632910 52632909 52632994 85 GAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:.:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::...::..... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 15774617 NA +3070 chr4 + 190214555 52632918 52632917 52632999 82 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAGAAAGAAAGA-AAGAAAGAAAAGAAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x.:xx..x.....x...::...:.........:.x..x.:x-....::....:..-:.x.::..x...........:. 47M1I13M1I22M 59/82 72.0% 84/94230402 0.0% 2/82 2.4% 15774625 NA +3586 chr4 + 190214555 52632920 52632919 52633017 98 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA------AGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 48787367 48787366 48787472 45442931 45442930 45443036 106 GGAAGATAGGAAAAAGAAGAGAAAGGAATACAGAACTTTTTAAAAAGGAATTCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAAGAAAGAACTCACTGAAGAAA .:....x..:..:..::.:......:..x.x....------.:....:..x--.....x:x...:...:...:.....x..x...........xxx.xx:...... 35M6I10M2I53M 71/98 72.4% 106/94230402 0.0% 8/98 8.2% 3845553 NA +3269 chr4 + 190214555 52632932 52632931 52633047 116 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGTAAGTTTCAT chr4 - 94230402 61334701 61334700 61334815 32895588 32895587 32895702 115 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAG-AGGAGACAGATTGGATTTAT ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x......x.x...:.:x:.x.:::...:.x..:.......-.::...x..:.x:.x..:.. 95M1D20M 72/115 62.6% 115/94230402 0.0% 1/115 0.9% -8701769 -85528633 +3023 chr4 + 190214555 52632969 52632968 52633040 72 AAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGTAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x.:x.:...:x.::..x.::.::.:..:...........::.x......:.x.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 27565984 NA +3363 chr4 + 190214555 52636885 52636884 52636962 78 CTGCAGCCTTGACCTCCCAGGCTCAAGCGATCCTCCCACCTCAGCCTTCCAAGTAGCTGGGACTTACAGGTGCATAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAAC-TACACGTGCACCAC ..:.....:x:.x..:.::..:.....:.x.:.x.xx:x.........:...........:..-....x.....:x.. 63M1D14M 55/77 71.4% 77/94230402 0.0% 1/77 1.3% 34439759 NA +3173 chr4 + 190214555 52651096 52651095 52651156 61 AAAAAAAAAAAAAAGAAAGAAAGAGAAAAAAGAACAGAAAAAGTTAAGTTACTAGCTTAAA chr4 - 94230402 39567140 39567139 39567200 54663203 54663202 54663263 61 AAGAAAAAGAAAAAGAAAGAAAAGGAAAAAGGAACAGGTGCAGTTAATGGGCCAGACTAAA ..:.....:.............::......:......:x:x......xxx:.:..x:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 13083956 NA +10501 chr4 + 190214555 52658919 52658918 52659337 419 CGCCGGGGGCTCGGGGACCCTCCCCGG------CCGCTGAGGTGGCTGCGGCCGCGC----GCCCAGCTCGGGGGCCGGGAACTTCTGGCGGCGCGGACCCCGCCGCCCCCGCCGCCCCA-GCCACCGGGCGTGTGTGCAGCTCGGGCTTCCCTTTCTTTGCCTCGCCGCGAGTCGGGCGCGACCCCGAGGCGGCTCGGCCACTCACCATATTACAGATGGAGGCGATGTTTCGGACAGTCATTAGTCTAAAGGTTGCAGCGATCCCTCACCGCCATCTTTACAAGGGGAAACCGGGACTGCCCATGGTGGCGCGCTGGCGGGGAGGCCGGGCGGCAGCGCGGCGGCCTGGGGTCCGGCTTTCAGTTTGGCTGGGAGAGGGAGGCCGGGAGGAGGAGGCG----------GCGGCGCGGGGAGGGCGGGGAGGGAGCGCG chr4 - 94230402 26361590 26361589 26361991 67868412 67868411 67868813 402 CGTCGGTGCCTCCGT--CCCTCCTCGGGACGGTCCGCCG----GGCCTCGGCCGCCCCCAGGCGCAGCCTGC---CCGG---CTCCCCGCCGCCGCCTCCTTTCCTTCTCCTCCTCCCGAcgcccccgggc--------agcccccgccgcccctccgccggccc-cggcaggcctgccgtaccgccccgcccgccgg--cACTCACCATATTACAGATGGAGGCGATGTTTCTGACAGTCATTAGTCTAAAGGTTGCAGCGATCCCACACCGCCATCTTTACGAGGTGAAAACGGCCCCGCTCATGGTGGGAAGAGCGCAGGAAAGGCAGAGGGGGTGTCGGCGGCTCCGGCTCGG-----------GGCTGGGGATGAG----CGGGAGGAAGGCCTGCCCGCGCCCCGAGGCGCAGGCGGGGGAGGGAAGGAGCTCG ..:...x.x...x.x--......:...------....:.----...:x.......x.----..x....::.x---....---..:.:x..x..xxxxx..::x..x:.:..x..x...x.-...x......--------...:.xx..:x...:.:.x::.x.:.-.x..::.:.x.x..::x.x..xx.x.x..:x.--.................................x.................................x...............:...x....x...xx.:..:........x:x.xxx..:..:.:.x.:.:x..x:xxx.......::x..x..x.-----------.......::x.:.----........:.:xx:.----------.x.....:..x:...x:....:.....x.. 15M2D10M6I6M4D14M4I11M3D4M3D38M1I10M8D26M1D32M2D157M11D13M4D15M10I30M 271/381 71.1% 402/94230402 0.0% 59/381 15.5% 26297329 NA +4326 chr4 + 190214555 52666262 52666261 52666415 154 GGAGGGAGGGAGGGAAAGAAAGGAAGAAAGAAAGAGAGAGAGGGGGAG--------AGAGAGAGAGAAAGAAAGAAAGAAAAGAAATAAAAGAAAGAAAGAGGAAAAAGGGAAGGAGGGAGGGAGGGAAAGAGAAAGAGAAAAGAGGGAGAGAGAAAGAAAA chr4 - 94230402 44053988 44053987 44054137 50176266 50176265 50176415 150 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGA------------GCAGTGAGACAGAAAA .:..::x..::.:........:....:.::x....:.:x.:..:..x.--------...:...:....::x..:..x...x.x...x..x........x:.x.x.....x.::x.::x:.:...:.:..:....------------.x..x....x...... 48M8I78M12D16M 94/142 66.2% 150/94230402 0.0% 20/142 14.1% 8612274 NA +3090 chr4 + 190214555 52690377 52690376 52690453 77 AAATATTAAGGAG---AAAGAGAGAGAGAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAGGAGAAAAGAAAAGGCAA chr4 - 94230402 48273057 48273056 48273136 45957267 45957266 45957346 80 AAATAGCAAGTAGCTGAAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAA .....x:...x..---..:......:x..:::::.x.........x.:x..x.:.:x.........:..:......:x.. 13M3I64M 54/77 70.1% 80/94230402 0.0% 3/77 3.9% 4417320 NA +3077 chr4 + 190214555 52710177 52710176 52710270 94 AGGAAGGAAGGGAGGGAGGGAGGGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGATTGATTAGACATACTAATTTCTCTAAAAAAATTAG chr4 - 94230402 44400496 44400495 44400587 49829816 49829815 49829907 92 AGGGAGG--GGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAG ...:...--...:.....:..:........:.:...:.:.:.:..:x::.x..:..x:.x:x.:x::.x..:xx.x.:..x...:......... 7M2D85M 59/92 64.1% 92/94230402 0.0% 2/92 2.2% 8309681 NA +3058 chr4 + 190214555 52710181 52710180 52710233 53 AGGAAGGGAGGGAGGGAGGGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAG chr4 - 94230402 44393358 44393357 44393410 49836993 49836992 49837045 53 AGGATGGGAGGGATGGAGGGGAGAGGCAAAAGGAAAGAAAAGAAAAACAGGAG ....x........x......:.::::x.:..:.............:.x..:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 8316823 NA +3658 chr4 + 190214555 52719144 52719143 52719240 97 CAGTGTGTGTGTG------TGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGT chr4 - 94230402 15882754 15882753 15882856 78347547 78347546 78347649 103 CAGTGTGTGGTAGCTGCATTGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTGT .........xxx.------..x......................:..xx.:.:..xx.......:..x...x....x..x...xxx:...xx.:..x:.:... 13M6I84M 71/97 73.2% 103/94230402 0.0% 6/97 6.2% 36836390 NA +3343 chr4 + 190214555 52719153 52719152 52719218 66 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882838 78347565 78347564 78347630 66 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTT ..x..............:.:.....:..xx.:.:.xx:.......:..x...x....x..x..... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 36836380 NA +3382 chr4 + 190214555 52719155 52719154 52719220 66 TGTGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882838 78347565 78347564 78347630 66 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTT ..x..............:.......:..xx.:.:.xxx.......:..x...x....x..x..... 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 36836382 NA +3163 chr4 + 190214555 52719159 52719158 52719218 60 TGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882832 78347571 78347570 78347630 60 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTT ..x............:.........:..xx.:.x..xx.......:..x...x....x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 36836386 NA +3259 chr4 + 190214555 52719159 52719158 52719214 56 TGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::.:.x.:.:.....:..:.:...............:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -40016189 -54214213 +3049 chr4 + 190214555 52719161 52719160 52719221 61 TGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882833 78347570 78347569 78347630 61 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTG ..x..........:.:.........:..xx.x.x..xx.......:..x...x....x... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 36836388 NA +3103 chr4 + 190214555 52719161 52719160 52719222 62 TGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA ..::.:.x.:.:.:...:..:.:........x......:.x.........:.x...:::... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% -40016187 -54214215 +3196 chr4 + 190214555 52723630 52723629 52723708 79 ACAGAGCTATACTACATTAAAAAAAAGA--------AAAAAAGAAATAGAAAGAAAGAGAGAGAGAAAGGGAAGGAAGAAAGGGAGG chr4 - 94230402 37322357 37322356 37322443 56907960 56907959 56908046 87 ACATAACAGTAATAAGGTGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGG ...x.:.x:..x..x:x.:...:...::--------.....::...x.:...:..............::x.:....:.......x.. 28M8I51M 56/79 70.9% 87/94230402 0.0% 8/79 10.1% 15401273 NA +3460 chr4 + 190214555 52733384 52733383 52733469 86 TATGTATGTATATACACA----TACACAGTTTTCTATATACTATATATATGTGTGTATATATTTATACACATATATACATATATACACAT chr4 - 94230402 87985352 87985351 87985441 6244962 6244961 6245051 90 TATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT ...:...:.x........----.......xX....x:.xxxx:..x:x.:....:.........:..:.:........:.:.x....::. 18M4I68M 61/85 71.8% 90/94230402 0.0% 4/86 4.7% -35251968 -58978434 +6071 chr4 + 190214555 52733501 52733500 52733683 183 TACATATACAATATGTATACATATATACACATATGTATACATATACACACATA------TGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACACATGTATACATATGTACACACATGTATACATATATGTATACACACGCATATATACATATATACACACACACA chr4 - 94230402 80747678 80747677 80747859 13482544 13482543 13482725 182 tatatataca-tatatatacatatatGCACACAAATATACACACTCACAGATAGGGgtgtgtgtgtgtgtatgtgtgtgtgtATATATAT-TGCACATTTAAAGCCCCTTGAACAGATAACTGTAC-----TGCAAGCATGTGTATAGCTATGCATACATACGCAACTATACATACATACACACACATA ..:.......-...:...........:....:.x:......:.:x....x...------...:.:::.:..::::::.:.:..:.:.:..-.::....x.:x.xx.x.x..x...x.:.xx.:...-----.:..x:.....:..:.xx....:.....:.....xx........:...........:. 10M1D42M6I31M1D35M5D58M 122/176 69.3% 182/94230402 0.0% 13/176 7.4% -28014177 -66216225 +3148 chr4 + 190214555 52733507 52733506 52733585 79 TACAATATGTATACATATATACACATATGTATACATATACACACATATGTATACATATACACACATATATACACACATG chr4 - 94230402 24136189 24136188 24136267 70094136 70094135 70094214 79 TAGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACACCCTTG ..x...:..:...:....x..::x.xx...x..:...:.:.:.....::x.:.x.:.x..........x.....x.x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 28597318 NA +3033 chr4 + 190214555 52733520 52733519 52733582 63 CATATATACACATATGTATACATATACACACATATGTATACATATACACACATATATACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ....:.x.::....::x..::..........::.........x.:.:.:..x..:::..:... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 45137108 NA +3801 chr4 + 190214555 52733521 52733520 52733637 117 ATATATACACATATGTATACATATACACACATATGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACACATGTATACAT----ATGTACACACATGTA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGT----GTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..:.::......x..:..:..:.:....::x.::.:.:...:..:..x.:::...:..::.x....----:.:..:.x....x..::......:.x..:.:.----...x:.....x..:. 66M4D32M4I15M 73/113 64.6% 117/94230402 0.0% 8/113 7.1% -36282561 -57947841 +4033 chr4 + 190214555 52733524 52733523 52733670 147 TATACACATATGTATACATATACACACATATGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACACATGTATACATATGTACACACATGTATACATATATGTATACACACGCATATATACATAT chr4 - 94230402 73121075 73121074 73121216 21109187 21109186 21109328 142 TGTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAG----CATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.....x:.::x.x..-.:..xx.x.:.:..:..:.....x..:...:.........x.x.----...:x.....:..:.:..x::...:.x:..:..:..x::...:..:x....::x:.::x.x......:::....x:..x.. 17M1D44M4D81M 89/142 62.7% 142/94230402 0.0% 5/142 3.5% -20387551 -73842851 +3997 chr4 + 190214555 52733541 52733540 52733684 144 ATATACACACATATGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACACATGTATACATATGTACACACATGTATACATATATGTATACACACGCATA-------TATACATATATACACACACACAC chr4 - 94230402 89016082 89016081 89016228 5214175 5214174 5214321 147 ATGTGCACACATCTGCATGC----ACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCAC ..:.:.......x..:..:.----.......::.x.:.:....:::..:..x...:.:....:.:x.::::::..:.x...:x..::......:.x..:.:.::x::.:x:.....x:::.-------.:.:.x:....x.....x.x... 20M4D97M7I23M 85/140 60.7% 147/94230402 0.0% 11/140 7.9% -36282541 -57947861 +3051 chr4 + 190214555 52733550 52733549 52733612 63 CATATGTATACATATACACACATATATACACACATGTATACATATGTACACACATGTACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ....::x..:....:.x.:::.....:....:..........x.::..:..x:.:.:..:... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 45137138 NA +3301 chr4 + 190214555 52733601 52733600 52733697 97 ACATGTACACACATGTATACATATGTACACACATGTATACATATATGTATACACACGCATATATACATATATACACACACACACACATATGACTGTG chr4 - 94230402 27943537 27943536 27943633 66286770 66286769 66286866 97 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGTTGGTG .:.x.:.:....xx..:....:...:...x:::..:.x.:..::.::.:..::::.x.......x..x..:.x....:...:x....::..x:x... 97M 59/97 60.8% 97/94230402 0.0% 0/97 0.0% 24790064 NA +3361 chr4 + 190214555 52733620 52733619 52733689 70 CATATGTACACACATGTATACATATATGTATACACACGCATATATACATATATACACACACACACACATA chr4 - 94230402 8395787 8395786 8395856 85834547 85834546 85834616 70 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ...:...::.::::..:...x.:..:.:.x....:.:.:..::x.....xx.................:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 44337833 NA +3599 chr4 + 190214555 52733627 52733626 52733687 61 ACACACATGTATACATATATGTATACACACGCATATATACATATATACACACACACACACA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .:...x...:.....x..:.:.............:......x.:...:..x:..:...:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 45137214 NA +3357 chr4 + 190214555 52734457 52734456 52734523 67 TTCTCTCTCTCTCTCTCAACCAGTTGTTTCTTTTCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC chr4 - 94230402 50770967 50770966 50771033 43459370 43459369 43459436 67 TTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATTTGTC ...................:.x...x..x:..x.:......:....x::x.x...:....x:..x.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 1963490 NA +3455 chr4 + 190214555 52736058 52736057 52736149 92 ATATACACATATATATACACATATATACACATGTATATACATACACACATATATACACATATACACATATATACACATATATACACATGTAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x:..:.:.:xx:.::...:..::...x:...::.x.:..:....::...:.:.x......:x..x..:.x......:..x....:..:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 24792521 NA +3643 chr4 + 190214555 52736078 52736077 52736221 144 ATATATACACATGTATATACATACACACATATATACACATATACACATATATACACATATATACACATGTATATACATACACACATATATACACATATACACGTATATACACATATATACAC-GTATATATACACATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCAC----ACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ..:.::......x.::..:..:......:.x.:::...----......::.x.::....:.:::.x....:.:.:..x....x:::::.:....:x..:.::.:x:..:x:..:.:x.:...-.:xxx.:.:.x.....x:.... 38M4D80M1I22M 82/140 58.6% 141/94230402 0.0% 5/140 3.6% -36280004 -57950398 +3007 chr4 + 190214555 52736093 52736092 52736204 112 TATACATACACACATATATACACATATACACATATATACACATATATACACATGTATATACATACACACATATATACACATATACACGTATATACACATATATACACGTATA chr4 - 94230402 8395759 8395758 8395870 85834533 85834532 85834644 112 TGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:........x.x:x.x..x.x.xx:xx..::.:.:..::::.::...x........x......:::.:::x..:.:xx...:....::.:.:.....x.:.:.x.:.x... 112M 65/112 58.0% 112/94230402 0.0% 0/112 0.0% 44340334 NA +3615 chr4 + 190214555 52736134 52736133 52736250 117 ATATATACACATGTATATACATACACACATATATACACATATACACGTATATACACATATATACACGTATATATACACATATATACACACATATATACACATATATACACATATGTA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..:.::......x.::..:..:......:.x.:::....:.:.::.:x..::.:...::..x.:::..:.::.x....x.::::......:x..:::::.x:..:x:....:x..:. 117M 65/117 55.6% 117/94230402 0.0% 0/117 0.0% -36279948 -57950454 +3850 chr4 + 190214555 52736161 52736160 52736283 123 CATATATACACATATACACGTATATACACATATATACACGTATATATACACATATATACACACATATATACACATATATACACATATGTATACACATACATATACACACATATATACACATAT chr4 - 94230402 73121100 73121099 73121216 21109187 21109186 21109303 117 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTA------CATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.:.::.::.....x..:::.:...:...:.x.x:..:.x:..:....::...x:.....:x:.....:::x:..------.....:x....:.x:...x.x........:....x:..x.. 76M6D41M 74/117 63.2% 117/94230402 0.0% 6/117 5.1% -20384939 -73845463 +3804 chr4 + 190214555 52736183 52736182 52736339 157 TATACACATATATACACGTATATATACACATATATACACACATATATACACATATATACA----CATATGTATACACATACATATACACACATATATACACATATATATACACACATATATATACACACACACACATATATATATAG-TGTGTTTTTTAGAT chr4 - 94230402 73121075 73121074 73121233 21109170 21109169 21109328 159 TGTACACCCACAGAAAC---TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGAT .:.....x:.:.x.x..---.:..xx.x.:.:.::.::..:..x:...........:...----...:x...:.:..:..:.x:.....:x:.....:::x:..:.....x.:..::x:.:.x.x.......:::...x::.x..xx-:x.:.....:.... 17M3D40M4I83M1I14M 95/154 61.7% 159/94230402 0.0% 8/154 5.2% -20384892 -73845510 +3446 chr4 + 190214555 52736191 52736190 52736327 137 TATATACACGTATATATACACAT-ATATACACACATATATACACATATATACACATATGTATACACATACATATACACACATATATACACATATATATACACACATATATATACA-----CACACACACATATATATATAGTG chr4 - 94230402 4417317 4417316 4417459 89812944 89812943 89813086 143 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTG ..:..:.x:..x:...x.x..x.-.x..x:.x.............:.:.:...x:x.::..::..::x:x:.x.:....::...xx.x:...x..x...:........x...x:.-----....x....xx.:.....x.x.. 23M1I91M5I23M 88/137 64.2% 143/94230402 0.0% 6/137 4.4% 48318874 NA +3653 chr4 + 190214555 52736205 52736204 52736306 102 TATACACATATATACACACATATATACACA----------TATATACACATATGTATACACATACATATACACACATATATACACATATATATACACACATATATATACACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.:..:::....x..:...:.........----------..:....::...x...:..:x:..:..:.:x::.......x.:..::x:.:.x.x.....:..:....x:.. 30M10I72M 67/102 65.7% 112/94230402 0.0% 10/102 9.8% -20384897 -73845505 +3150 chr4 + 190214555 52736228 52736227 52736295 68 ATACACATATATACACATATGTATACACATACATATACACACATATATACACATATATATACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....x..::.....x..:.:........::...:..:...x.:......x:.:::.:::..:.x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 45139815 NA +3155 chr4 + 190214555 52736246 52736245 52736323 78 ATGTATACACATACATATACACACATATATACACATATATATACACACATATATATACACACACACACATATATATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ....:.::.::.::::...x...::...x....:..:...::x:...:xx...:.:.............x.:.:.x.. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 44340458 NA +3279 chr4 + 190214555 52741095 52741094 52741191 97 GAAAGAAAGAAAGTAAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGGAAAGGAAAGGAAAGAAAGAAAGAAAG-------AAAGAAAGAAAGAAAGAAAG chr4 - 94230402 54300390 54300389 54300493 39929910 39929909 39930013 104 GAAAGGTTAAGTGCCAGGAACTGAAAAGGGAGGGAGAAAGACATGGAGAGGAAAGGAAGCCAAAAAAAAAAAAAAAACCAACCCAAAACAAAACAGAAGAAAAG .....:xx:.:x.:x.....xx:..:.::...:....:...x.x:..:..........:xx...:...:...:...:-------...:x..:.x....::.... 77M7I20M 64/97 66.0% 104/94230402 0.0% 7/97 7.2% -1559295 -92671107 +3058 chr4 + 190214555 52747228 52747227 52747267 40 AAAAAACAAAACCAAAAACAAACAAACAAAAAACCTTTCC chr4 - 94230402 17429030 17429029 17429069 76801334 76801333 76801373 40 AAAAAACAAAACAAAAAACAAACAAACAAAAAACCCCACC ............x......................::x.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 35318198 NA +3234 chr4 + 190214555 52752737 52752736 52752781 45 CAAAAACAAACAAACAAACAAACAAACAAAAAAAAAACCACAAGG chr4 - 94230402 51198564 51198563 51198608 43031795 43031794 43031839 45 CAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGG ......x..x....x...:...........x.............. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 1554173 NA +3043 chr4 + 190214555 52752745 52752744 52752779 35 AACAAACAAACAAACAAACAAAAAAAAAACCACAA chr4 - 94230402 71528712 71528711 71528746 22701657 22701656 22701691 35 AAAAAACAAACAAACAAACAAAAAAAAAACCACAA ..x................................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -18775967 -75454435 +4247 chr4 + 190214555 52795698 52795697 52795856 159 AGCTAC-TCTAGGAGAAGCTGAAGCAGGAGAAGGAAGGAAGGAAGGGAGAAA-GAAAGAAAGAAAGAA----------AGAGAAAGAAAAG----AAAGAAAGACAAAAAAAGAAAGAAGAAAGAAA----AGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAA chr4 - 94230402 65901795 65901794 65901973 28328430 28328429 28328608 179 AGCTATATTTAAAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGACAATATAAAATGGAAAAACATTGGAAGCAGAGAACAATAGACAGGGAGAAAA .....:-.:..::......::..::...x.......:x...x:..x::....-.x...:......:..----------.......:.:x..----..x....:x.....x.x:....:.....x.:.----.x....x::.:...x.xx....:x.:....x:.x...x.::..:.:.. 6M1I45M1I15M10I13M4I32M4I48M 109/159 68.6% 179/94230402 0.0% 20/159 12.6% -13106097 -81124305 +3281 chr4 + 190214555 52795707 52795706 52795810 104 AGGAGAAGCTGAAGCAGGAGAAGGAAGGAAGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAA---AAAGAAAGAAGAAAGAAAAG chr4 - 94230402 53664679 53664678 53664785 40565618 40565617 40565724 107 AAGAGCAGCTGGAGCAAGAGAGAGGGAGTGTTTGTTGTAAGAGAAAGCAAGAGAGTAAAACAAAAGAAAGGCCGAAGGAGAAAGACCAAAGACAGAGGAAAAAACAG .:...x.....:....:....::.:::.x:xxx:xx.x:.:......x....:..x..:.x...::....:xx...:..x...:---.....x...:....:..x.. 84M3I20M 67/104 64.4% 107/94230402 0.0% 3/104 2.9% -868972 -93361430 +3383 chr4 + 190214555 52795736 52795735 52795880 145 AGGAAGGGAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAGGAGAGGAGAGGAGAGAA chr4 - 94230402 57463185 57463184 57463322 36767081 36767080 36767218 138 AGGAGCTGAGCACTACAGTAAGGCAGTAAGCAATAGGAAGAAAATGCAGACAAAAAGCCCAGTTC-------CAGACAGGAAACATGGAAAGGAGAGAAAGGTGAGAATAAAGGTGCTGAAAGAAGAATTGAGGAGAAGAGAGAA ....:xx...x.xx.x..x...:x..x...x:.x..:..::...x:x.........:xxx.:xxx-------x...x.:....x.x:.......:......:x:::..x...::x:xx.........:xx.......:....... 65M7D73M 87/138 63.0% 138/94230402 0.0% 7/138 5.1% -4667449 -89562953 +3685 chr4 + 190214555 52795746 52795745 52795888 143 AAAGAAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGA---AGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGA-------AAGAAAGAAGAGGAGAGGAGAGGAGAGAATAGAAGAG chr4 - 94230402 42084013 42084012 42084165 52146238 52146237 52146390 153 AAAGGGAGTAGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAAGCACAAATGGG ....::..x.::.:x.:.::...:.....::.:.:....x.x.:......x.x.---:.x:x.x....::....:x.x.:...xx..x....::.x.:x:....xx...-------..:...:..:.....:.:....:::..x.:.:.x.:. 54M3I52M7I37M 88/143 61.5% 153/94230402 0.0% 10/143 7.0% 10711733 NA +3095 chr4 + 190214555 52795751 52795750 52795899 149 AAGAAAGAAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAGGAGAGGAGAGGAGAG-AATAGAAGAGAAAGAGAAAAA chr4 - 94230402 53020648 53020647 53020787 41209616 41209615 41209755 140 AAAAAAGCAAGAGAGAAAAATAAACCCAAGTAAGAGAAAGATTGAAATGACAGTGGGCATTAAGTACAGAAACAAAGGAAAAAAAGCTGTCAAAAATAAT----------TAGGAGAAGAGTTAGAAGCAATCCAAGAGAAGTAAAAGAA ..:....x....:...:...x...xxx...x....x...:.xx....x:.x.:x.::x.xx..:x.x.....x........:....xx:xx..:..x..x----------x......:...xx:::..-...xx.......:x.:..:.. 100M10D18M1I21M 90/139 64.7% 140/94230402 0.0% 11/139 7.9% -224897 -94005505 +3319 chr4 + 190214555 52795758 52795757 52795846 89 AAAGAAAGAGAAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAA chr4 - 94230402 22088979 22088978 22089067 72141336 72141335 72141424 89 AGAGAAAGAGAAAGAAAACCAAGCATAACAGATAAAGAACAATGTAGAGTGGAAAAAGAAACACTATAACAAAAGAACAAAAGAAAAAA .:................xx...x.x:...:.x......x:.x.x.:::x:::........x.xx:x..x:......x:.......:.. 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 30706779 NA +3198 chr4 + 190214555 52795768 52795767 52795835 68 AAAGAAAAGAAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAA chr4 - 94230402 83987815 83987814 83987882 10242521 10242520 10242588 68 AAAGAAATGAGTGCTAGAAGAATATGGACAGAAGAGAAAATAGAAATGAAAAAAAAAAAGAAAAGAAA .......x..:x.xx...x:..x.x:..x......:.:..x.....x....:...:....:....... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% -31192047 -63038355 +3468 chr4 + 190214555 52795777 52795776 52795857 81 AAAGAAAGACAAAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 25066975 25066974 25067055 69163348 69163347 69163428 81 AAAGGCTGCCAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA ....:xx.x....:.x...x........x..x...:.:x:::::x....:..:..:...........::.x......::.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 27728802 NA +4000 chr4 + 190214555 52795788 52795787 52795915 128 AAAAAAGAAAGAAGAAAGAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAAAGA---AAGAAAAAGAAAGAAAGAAGAGGA----GAGGAGAGGAGAGAATAGAAGAGAAAGAGAAAAACAGATTCAGCTGGGCA chr4 - 94230402 30533164 30533163 30533297 63697106 63697105 63697239 134 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGA-AAGGAGAGGAATAAAGTCTGTGGAGTA ...x..:..:..............:::..:.......xx.x:..:..:x....:---....x.....xx....x.::..:.----..::.:.:....:..:.xx:..-..:....::..:.:.x..x.:x.:.:. 54M3I24M4I22M1D27M 85/127 66.9% 134/94230402 0.0% 8/127 6.3% 22262624 NA +3027 chr4 + 190214555 52809201 52809200 52809302 102 AGAAAGAAAGAAAGAAAAGAAAGAGAGAGAAAGACAGAGAAAGAGAGAGAGAAAAAAAGGAAAGAAAGGAGAGAGAAAAAAAGAAAGAAAAAGAAAATAACT chr4 - 94230402 60992639 60992638 60992740 33237663 33237662 33237764 102 AGACCAAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACT ...xx:.:...:.x...:x.:.:x:...:x.:..x..:...:.::..x..:...:x:.:.:..:x....x:::....x.:.xx.....x....:.:.x.... 102M 61/102 59.8% 102/94230402 0.0% 0/102 0.0% -8183438 -86046964 +3510 chr4 + 190214555 52811219 52811218 52811310 92 AAAGGAAAAATAAAGTG-TTAGTTTGAACACTGTAAATTGTCCATATTTGGCCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCTCTCT chr4 - 94230402 60463206 60463205 60463298 33767105 33767104 33767197 93 AAATGCAAAATCTAGTGCTTTGATTAACCACTTTAGAGAGTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGTCTGTTTTT ...x.x.....xx....-..x.x..:.x....x..:.xx..:...x.:.x.x:.........x.............:.:x..:....x.:.:. 17M1I75M 66/92 71.7% 93/94230402 0.0% 1/92 1.1% -7651987 -86578415 +9854 chr4 + 190214555 52824789 52824788 52825007 219 CTGTGTGCAGAGGCAGTGAGTGGATGAGAAAGTTTTAGCTCT-GGTGAGGCTGAAGGGACTTGACATGTTATTGAATCAAAGGCTGTAGAAGGTGAAGCTGGGGCCGCCACACATTCCAGGAATGCGGATATAGCACTCTCAGTGTGTATCTGAGGCTGACAGGGTTTGACAATCTCCATCTGGGAACAATAAC--CTCGAGCAGCA-GGCCAGGCCATGCTG chr4 - 94230402 26384904 26384903 26385126 67845277 67845276 67845499 223 CTAAATGGAAGGCCTGTAAGTGGGTGAAAGTATTTTAGAGCAAGGTGAGACTGAAGAGAGGTGACATTTTATTGAATTAAGGGCCTTAGAAGGTGAGGGCTGTGCAGCCATAAATTCCAGGAATGCGGATGTGACTCTCCGAATGTGTATATGAAGCTGACAGGGTCTGACAGCTACCATCTGTGAACAATAACGTATAGAGAAGCACGGCTGCACGATGCCG ..:x:..x.::.x.x..:.....:...:.:x:......xx.x-......:......:..xx......x.........:..:...:x..........:.x:x.x..x....:.x.................:.::.x...:x.:.......x...:...........:.....:::x.......x..........--x.x...x....-...::x:.x....:. 42M1I151M2I11M1I15M 161/219 73.5% 223/94230402 0.0% 4/219 1.8% 26439885 NA +9578 chr4 + 190214555 52853386 52853385 52853675 290 CTTGCAACACTTTGGAGCAG-ATAGCTTTACATTCCAGCTGAATTAATAATAATTAATTATGGACTTCACACAACATTCTCAGCAGAGATGTCCCAGCATACCAGCCTTCACACTACTGATGCTTGGAATGTGCAGTTCCTCTATCAGTTACAATCTGCTGTGCACAACTTCTATTTTGGGCCTAAGTTGTTTCTTTATATAG---AAACCAGTACCCTTGTCAAATCAAGTGAG-TGCATGAGTCATTTGTGCATTTCCTAAAAACCATCACATCAAATTTTCCTCATCTGTTA chr4 - 94230402 26396280 26396279 26396551 67833852 67833851 67834123 272 CTTAAATCCCATTTGAACGGCATAGATTTACATTCCAGATGAAGCATTAAT----------GGCTTTCACACAATATCCTCAGCAGAGATGCCCCAGCATACCAACCTCTGTGTTTTTGGTAGCTGGAATTTGTAAGTCCTCGAGGAGCTGCATTCTTCTGAGTGTTACTTCTATTTTTGGACTGAGTGCTTTCTTTATTTAGCAAAAAACTGTGCTCTTGTCAGACTGTGGAGGCTATATGAGTCATCTATACA-------------ATAACACTAAATTACCCCTTTCTGCTA ...:x.x.x.x..x..:.:.-....x............x....x:.x....----------..x:.........:..:.............:............:...::::::.x:..:.:x:......x..:.:x.....x.xx..:.:..x...x...x.:::x...........x..x..:...xx.........x...---...x.x..:.:.......:.:::x.x::.-.::.........:.:.:..-------------..x...::.....x:..::x....:.. 20M1I30M10D142M3I29M1I19M13D27M 188/267 70.4% 272/94230402 0.0% 28/267 10.5% 26457106 NA +3207 chr4 + 190214555 52857883 52857882 52857925 43 CCAAGTAAACCTTTTTCTTTTCTTTTCTTTTCTTTTTTCACCT chr4 - 94230402 2273559 2273558 2273601 91956802 91956801 91956844 43 CCAAATAAAGCTTTTTTTCTTCTTTTCTTTTCTTTTTTCCCCT ....:....x......:.:....................x... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 50584324 NA +6985 chr4 + 190214555 52862484 52862483 52862657 174 GCGCGGTGCGCCGCAGC-CGAGGCGATGCGCCTCATTCAGAACATGTGCACCATCGCCGAGTACCCCGCGCC---------GGGCAACGCCGCGGCCTCCGACTGCTGTGTGGGCGCCGCCGGCCGCCGCCTGGTCAAGATCGCCGTGGTGGGCGCCAGCGGCGTGGGCAAGACCGGTGAGTCG chr4 - 94230402 26402651 26402650 26402807 67827596 67827595 67827752 157 gcgcggggctgcgcggggctgcgcgATGCGCCTGACGCAGAGCATGTGCACCATCGCCGAGTGC---GCGCCCGGCGGTGAGGGCTGCCCCGCGGCT-----------------------CGGCC-TCGCCTGGTCAAGATCGCCGTGGTGGGGGGCAGCGGAGTGGGCAAGACAGGTGAGGCG ......x..xx...:.x-.x:x...........x.:x....:....................:.---.....---------....x:.x.......:-----------------------.....-:..........................x.x......x...........x......x.. 17M1I46M3D5M9I16M23D5M1D58M 124/147 84.4% 157/94230402 0.0% 37/147 25.2% 26459833 NA +3699 chr4 + 190214555 52863264 52863263 52863329 66 GCAGCACTGGTGGTCCGGTTCCTCACCAAACGATTCATCGGTGACTATGAAAGAAATGCAGGTGAG chr4 - 94230402 26402876 26402875 26402941 67827462 67827461 67827527 66 GCAGCGCTCGTGGTGCGGTTCCTGACGCGGCGCTTCATCGGCGACTACGAGCGGAACGCAGGTGGG .....:..x.....x........x..xx::..x........:.....:..:x.:..:.......:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 26460388 NA +3899 chr4 + 190214555 52864476 52864475 52864559 84 AGGTAATCTCTATACTAGACAAGTTCAGATAGAAGGTGAAACCCTGGCTCTTCAGGTTCAAGACACTCCAGGTATTCAGGTGAG chr4 - 94230402 26403751 26403750 26403834 67826569 67826568 67826652 84 AGGTAACCTCTACAGCCGGCACATCCAGATCGACGGGGAGGTGCTGGCCATCCAAGTGCAGGACACCCCGGGTGTGCAGGTGAG ......:.....:.x:x.:..x:.:.....x..x..x..:::x.....:x.:..:..x..:.....:..:...:.x........ 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 26460725 NA +40612 chr4 + 190214555 52864940 52864939 52865833 894 TATAGACAAAAGCGCCATGCTAGGGTTTTTCCCCCCGCCTCCTGAACTGGGCAGTTATCCAGGTTTAAATGCTTCCAGCTCCTATCTTTACTTCCCCAGACTTACTGTCTAGCCAGTTAATTTCCCATTTTGTGCAACTACAAAGTCG--CTCTGCATGGAGTTCTCTGCAGGTCAATTTTCCACTTGAGTGTGGTAAGCTGCACTGTTA---TTTATTCCCACTCTGTGCAGCTGGATCAACATAT-----TGTCAAGAAAGCTGAA----------GTGTGTGGGATATAAGTTG----TTTATGGCCCTCAACCTGGCACTACTATGAAGGGCTCTTTTGAATTTGAAATCTACCCAAGCCC----AGGCTCTTTGTACAACTGGCCAGCATTCACCTTGCCATCACTCCTCTCTTTCAGGTCCATGAGAACAGCCTGAGCTGCAGTGAACAGCTGAATAGGTGCATTCGCTGGGCAGATGCTGTGGTGATCGTTTTCTCCATCACTGACTACAAGAGCTATGAACTCATCAGCCAGCTCCACCAGCACGTGCAGCAGCTACACCTGGGCACCCGGCTGCCTGTGGTGGTCGTGGCCAACAAAGCTGACCTGTTGCACATCAAACAGGTTGACCCTCAGCTTGGACTGCAGCTAGCCAGCATGCTAGGCTGCTCATTCTATGAAGTGTCTGTCAGTGAAAATTATAATGATGTCTACAGCGCCTTCCACGTCCTCTGTAAAGAGGTCAGTCACAAACAGCAGCCTAGCAGTACACCCGAGAAGCGAAGAACCTCCCTCATTCCCAGGCCCAAGTCACCCAACATGCAGGACCTGAAGAGGAGGTTTAAGCAAGCCCTCTCTGCCAAAGTGAGGACTGTCACCTCCGTCTGAAGCAGGAGGAGCACTCAAGGGGGTTTGG chr4 - 94230402 26404316 26404315 26405203 67825200 67825199 67826087 888 TATAGACCTGAGCG--GTGCTGGATTTTTGCCT------TTTTGAACTGGGCAGCACTCCAGGTCTAAATGCTTCCAGCTCATATCTTTGCTTCCCCAGACTTACTGTCTAGCCAGTTAATTTCCCATTCTGTGGAACTACAAAGTCTTTCTCTGCATGCAGAACGACTCAGGTCAATTTTCTGTTTGAGTATAGCAAACTCCAGTGTTACATTCCATTTTTTTTTTTTGCAGCTGAATCAACATATGTATTTATTCGCCACGCTCAGATTAAGTTTTGTACTTAGAATGTGAAATGCAGATATGTACGTCTGAAGCCG---------TAAAATGCTATTTAGA-TTTAAAG-------GAGCCTTTTAAAAGTCTTT-TACGACCT-CAACCATCTAATTTGAGACCATTCACTCCA--CAGATCCACGAACACAGCCTGGATTGCAACGAGCAGCTGAACAGATGCATTCGCTGGGCAGACGCCCTGGTGATCGTCTTCTCCATCACAGACTATAAGAGCTATGAACTGCTCAGTCACCTGTACCACCACGTTCGGCAGATGCATCCGGGGAATGCTGTCCCTGTTGTCATCGTAGCGAACAAAGCTGACCTCTTGCATATTAAAGAGGTGGAGCCTCAGCATGGACTTCAGCTGGCCAACATGCTGGGCTGTGCTTTCTATGAAGTGTCTGTCAGCGAAAACTACAACGACGTCTTCAATGCCTTCCACGTCCTCTGCAAAGAAGTCAGT---AAACAACAGACCACCAGCACCCCCGAGAGACGGAGAACTTCTCTCATTCCACGGCCCAAATCGCCCAACATGCAGGATCTGAAGAGGAGGTTTAAGCAAGCTCTGTCTGCCAAAGTGAGGACTGTCACGTCTGTCTGA--CAGCAGGGCCAAGAAGAGGCGTTGGG .......xx:....--:....:.:x....x..:------.::............:xx.......:................x.......:.......................................:....x............x--.........x..xx.xx:x.............:::......:.:.:..:..x..x.....---.::...:::x:.:.x........:..........-----.:.:x:xx.x...x.:----------..::x.:.:..:.:.:x..----.x.:.:xx:..x..x.:.---------.:..:x...x...x..-...:..:-------:....:----.::x.....-...:..:x-.x.x...::.x:...xx.:..:..x:::.x--...:....:..:x........:::....::..:........:..:.................:..:x..........:...........x.....:..............xx....:..x..x:....x.....x.:....x.:..:.:...x.x:xxxx.x.....x..x:....:..x..............x.....:..:...x....x..x.......x......x.....:....:......:.....:x.x....................:.....:..:..:..:....x..::.................:.....:......---.....:...x.:.x...:..x.......::..:.....:..:........xx.......:..:..............:.......................:..x.......................x..:......--...x...:x..xxx.::..x...x.. 14M2D17M6D109M2I60M3I34M5I16M10I19M4I18M9D16M1D7M7D6M4I9M1D8M1D30M2D333M3D138M2D26M 659/860 76.6% 888/94230402 0.0% 62/860 7.2% 26460624 NA +12211 chr4 + 190214555 52865345 52865344 52865810 466 ACAGCCTGAGCTGCAGTGAACAGCTGAATAGGTGCATTCGCTGGGCAGATGCTGTGGTGATCGTTTTCTCCATCACTGACTACAAGAGCTATGAACTCATCAGCCAGCTCCACCAGCACGTGCAGCAGCTACACCTGGGCACCCGGCTGCCTGTGGTGGTCGTGGCCAACAAAGCTGACCTGTTGCACATCAAACAGGTTGACCCTCAGCTTGGACTGCAGCTAGCCAGCATGCTAGGCTGCTCATTCTATGAAGTGTCTGTCAGTGAAAATTATAATGATGTCTACAGCGCCTTCCACGTCCTCTGTAAAGAGGTCAGTC--ACAAACAGCAGCCTAGCAGTACACCCGAGAAGCGAAGAACCTCCCTCATTCCCAGGCCCAAGTCACCCAACATGCAGGACCTGAAGAGGAGGTTTAAGCAAGCCCTCTCTGCCAAAGTGAGGACTGTCACCTCCGTCTGAAGCAG chr4 - 94230402 81901812 81901811 81902274 12328129 12328128 12328591 463 ACAGCATCTGCTGCCAGGAGCAGATAAACCGCTCGATCTACTGGGCAGATGGCTTCGTTTTCGTTTACTCCATCACAGAATACGAGAGCTACCGCGTCATCCGGCCCCTGTACCAGCACATCCGCAAGATTCACCCCAATGCTAACATCCCCCTGCTTCTGATGGCAAACAAAGGAGATCTCCTGCGAGCCAGGCAGGTGTCCTCCAAAGAAGGACTCCAGCTGGCCAGCGAACTGGGAGGTACTTACTATGAAGTCTCAGCGCGGGAGAACTGCGAGGGCGTGCATGAAGCCTTCCAGCAGCTTTGCCAGGAGGTCAGCAGGATGATTGGCAGCT--GCAATGGA---GAGAAACGAAGAGGCCTCCACCTTGTCCGACCCAAGTCTCCAAATATGCAGGACTTGAAGAGACGTTTGAAACAGGCTCTGACTTCCAAAGGGAAATCTGCCACTACGCTTTGATGTAG .....x.xx.....x:x..:...x.:..:x.x.xx..:::...........x:x.x..xx......x.........x..x...:.......:x:xx.....x.x.xx..x:........:.x.:xx..x.x....:x::::.:x:xx.x..:x..x.xx.x:....x.......xx..:..x:...:x::..::.....xxx.:.:x.:xxx.....x.....:......:x:..:..xx.:x.x.x.........x..x.:xx.x..:..:.:::.x.::..x:.:::x........xxxx..:..:x.:........:x--.::.x::.....:--...:.:x.---.....:......:x.::..x.x..x:.x.:........x..x..:.........:.......:x.x..x..:..:..:..xx..x......x..::x...:...:x.xx.:...x.:.. 321M2I13M2D8M3D119M 287/461 62.3% 463/94230402 0.0% 7/461 1.5% -29036467 -65193935 +3296 chr4 + 190214555 52866191 52866190 52866285 95 GCTTTCTTTTTTCCCCCTTTTTTCTTTTTTCTCTTTTCTTCTTTCTTTTCCTCTTTTTCCCCAAGAGGAAGAATTGCTTTTCTCTTACCAGTATG chr4 - 94230402 68014328 68014327 68014422 26215981 26215980 26216075 95 GCTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATTATAAAAAAGAGCTTATCTGTTGGAAGTATG ...x:...:.::..:..::x::.::......:.:.::.:x.........:..:.:....x.:.xx.x:..:..xx....x...x..:xx...... 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% -15148137 -79082265 +3079 chr4 + 190214555 52866192 52866191 52866233 42 CTTTCTTTTTTCCCCCTTTTTTCTTTTTTCTCTTTTCTTCTT chr4 - 94230402 66510365 66510364 66510406 27719997 27719996 27720038 42 CTTTTATTTCTCCTTCTTTTTTCTTTTTCCTCTTTTCTTCTT ....:x...:...::.............:............. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% -13644173 -80586229 +5400 chr4 + 190214555 52866705 52866704 52866816 112 TTATCTTACAGCAAGTGAACAGGGGCTACCTGCCACATCCCCTCCACAGATGCACTTTAAAAAGCCACTCATGCTTTGGCTTAAACTGTAATTAATTTATTTTATGTACAAT chr4 - 94230402 26406186 26406185 26406297 67824106 67824105 67824217 112 TTTTCCTACACTGAGCCAGTGGAGTTCACAGGCTAAAGGCCTTACACACATGCACTTTAAAAAGCCAGTTGTGCTTTTGTTTGAACTGTAATTTATTTATTTTATGTACAGT ..x..:....x::..:x.:::.:.x::..xx..:.x.xx..:.x....x..................x.::......x.:..:..........x................:. 112M 81/112 72.3% 112/94230402 0.0% 0/112 0.0% 26460519 NA +3094 chr4 + 190214555 52866992 52866991 52867064 73 TAGTATTATCCCCATAATACAGATGAGGAAACAGGCTTATAGAACAAGATCAGTAACTTGTCAAAGGCCACAG chr4 - 94230402 80987859 80987858 80987931 13242472 13242471 13242544 73 TAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAG .....x......:..xx........:......x.:xx:..x::.x.:.x.xx..:.....:.x....:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% -28120867 -66109535 +4746 chr4 + 190214555 52873870 52873869 52874109 240 AGTGACAGGGACGCTGGTTGT-GGAGGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTT-ATCTTCTTAGCGGATGCTC-------AGAAGCCAAGGTCTGGATGCAGTCGGTCAGTTGCAAATAACAGCTCAGGAATGTTAAGTGGCTTCAGGAGTCGTGTGGACAGCACGATTACCTAACAACAGGAGAGGGCAAACACACCGCAGG---GAATTAGGGGGGCCAA chr4 - 94230402 26409303 26409302 26409551 67820852 67820851 67821100 249 AGTGGGGGACATGCTGCTTTTCAGAGGGCTGTTGGGAGCAGTGATAAACCAGGGACTTGATGCTTCTAGCCAAGGCAGCCATCCATCTTCTCCACAGATCCTCCCATGTCAGATATCACGGTCAAGTTGGGGATGATCAGCTGCAAACAGCTGCTCAATAGCACCTTGTGGGGTCAGGAGCGTTGAGGAGAGCACAATTACCT---GTAAGAAGGGGGAAAAGAAACAAGAAGTCAAAATTAAGGGGATCGA ....:x:.:x.:....x..x.-:....:x.:..x....::...::.:.xx.xx.xx.:.::::...:...:x::.:..x:x.:-.......:x:.:...x...-------...x::..x....x:.x..x:.x:.:....:......:.:.x.....:x.:::::xx....xx.......:xx..x...x.....:.......---:xx..:..:...x...x.x..x:x.:.---:.....:....::.:. 21M1I61M1I19M7I93M3D27M3I16M 143/237 60.3% 249/94230402 0.0% 15/237 6.3% 26464567 NA +7143 chr4 + 190214555 52885744 52885743 52885879 136 TACCTGGGTTCCTGGCTTCAACGATGCCACAAGATCTTTGACCATTTTCACTTCAGAGACTGTGACCCCACCTACCACAAAGAGGATCAGGAGGGGGTAGTCACTAGGATGAGGCCGGCTCACCTGCAAAACAAAA chr4 - 94230402 26413439 26413438 26413574 67816829 67816828 67816964 136 TACCTGAGTACTAGGTTTGCGTGTTGCTACCAGATCCTTCACCATTTTGACCTCAGACACTGTCACACCACCAACCATAAAGATGATCAGAAGAGGATGGTCACCGGGGTGAGAGCGATTCACCTGTAAAATGAAA ......:..x.:x..:..xx::.x...:..x.....:..x........x..:.....x.....x..x.....x....:.....x......:..:..:.:.....::..:....:x..::.......:....::... 136M 100/136 73.5% 136/94230402 0.0% 0/136 0.0% 26472305 NA +10482 chr4 + 190214555 52894242 52894241 52894751 510 TTCTTAAAAAGCACACATAAAAGGAGGTA-----AAAGGGCCTCATGCAGTTTCATTAGATAAAAACCCACCCTTCTCATGTCAATTTTAGCAGAGAAAGCATCTTGACAAATCATGTCCTTTAGTCAAAACAAGCTGAGGTCCAAACATATGGAGTAGATAGAAAATAAATTATTTT--CAGGAGACTGAGATCCAAACCACAAATTCCAGAAATGCACTTTAAAAGTGCTGCCTATTAGACATGCTAGTTTTAAATTAAATTAATGTTGTAGGGAGAGGGGTAAGGTATGTCTTGATTTATTTGTTAGATCATTATCAAGCTTTCCTCTAAGGAGCTCAAGGTATTCCATGCACAAGGATTTTAGAGAAAAGGCTGTTTGAAGAATGTCAGGTTCTGCCAAAGCTGTTTCTCCCTAGTTTGCTAGAACCACTCCCTAGTGGGCTTCACACACTGCCCTTTGAAGCTGACAGCTTTGTGTGGCTAACCGCAAGTCTATCCTCTGGTTGAGAAGTAC chr4 - 94230402 26415482 26415481 26415952 67814451 67814450 67814921 471 TTCTAAGCAAGCACGCATAACACTAGACACACTGAAAGGACACCCAGTATATTAATCAGA---AAACACAAGCTT-TCATGGCAGTACTGG--AAGAAAATGTCTTGACAAATCAT-----TCAGTCAAAATAAACCCAGATCCAAACACGTGTTGTCTATACAAATCTTAGTATTTTTTCAGAAGACCAAAGTTCAAGCCACAGATTCCAGAAATGCATATTAAAAATATGAC----TAGGTATGCAAACTCAAAATTAAATTAAAATTGCAATGAACGGGGTTTTGGAATCTGTAAT---TTTGTTATGATACGCACAAGTGTT--TTGAAGGAG--GACGATACTTCGGGTACAAAATATTT--------GGCTGTGCTAAGAATGCAAATTTCTGCCAAGATTTTTT-------GTTTGATAATACAACCACCCA--AGGCT-------CTCTCTTTTGAAGGAACTGGCTTCGTGTAGCAAAACACAACTCATTTTTGTGTTACAGAAGAAC ....x.:x......:.....x.xx..::.-----.....:.x:.xx.:.xx..x..:...---....x..xx...-.....x..:.x:.:.--:.....:::..............-----.:........:..:.:x..:........::..xx..xx...x...x:xx.x......--...:....::.::.:...:.....:..............:x......:.::x:.----...::....x.::.:x............x:...:.:x..:x.....xxx.x.xx::x.:..---.......x:x:.:xxx....:x..--.:x......--x.x.:..:.:.:x.:....::xx...--------......x:x.......:x.:x.........:::.x...-------.....x..:x..x..:x..:.--:....-------..x:.:.......xx:x::....:....:..x..x.:...x..xx.::.x..x.xx.....x.. 29M5I26M3D12M1D15M2D23M5D57M2I54M4D61M3D24M2D9M2D26M8D38M7D21M2D5M7D64M 309/464 66.6% 471/94230402 0.0% 53/464 11.4% 26478760 NA +10256 chr4 + 190214555 52907452 52907451 52907688 237 TTTACCTTCATGAACATGCTAAATCCAGTTTTAAGGAGATCAGTGAGGCCTGAAGACATGTGTTCAATATCAACGGAATCTGGCCTCTCGGGATGAAATATTTCCTCCACAACTTGCTTCAACAATGGCTTATAAGATGCCTG-----GAAAGACAAAATACTATGAGTAAAGGGATT---GTTTGGTTTGTCTGGAGAGAGGACAGCTTTATCTGCAATGAAGAAAGCAAAGCAAGTTTATTTT chr4 - 94230402 26418651 26418650 26418895 67811508 67811507 67811752 245 TTTACCTTCATGAACATGCTGAATCCAGTTTTAAGTAGATCAGTGAGGCCTGATGACATATGCTCAATATCAACAGAATCTGGTCGATCAGCACTGCAGATCTCTTCTACCACCTGTTTCAGCAGCGGTTTGTAAGAAGCCTGCACAAAAAGAACAACACGCTGTGAGTAAAGCTGATGAGGTTTGGTGCAACTGCTCTTCTAAATCTTCTATTTCCATTAAAGGAAACAAAAAATATTTATTCT ....................:..............x.................x.....:..:...........:........:.xx..:.x.:x:x.x..:..:..:..x..:..:....:..::..:..:.....x.....-----:..::....x.::..:.........xx:x.---.......x::x...xxxxxxx:.xxx:.:...:.x..x.:...:..:....:x.x:......:. 143M5I30M3I64M 170/237 71.7% 245/94230402 0.0% 8/237 3.4% 26488801 NA +3714 chr4 + 190214555 52925034 52925033 52925137 104 ATACATAATAGCTCATTTAATCTCCACAGACACCTAATGTGCTAGGTA-CTATTATCATTCTCATTTTGCAGATGGAGAAACTGAGCCACAGAGAAGTTAAGTAA chr4 - 94230402 10729146 10729145 10729249 83501154 83501153 83501257 104 ATAAACAGGAATTGATTTAGCCTCACAATACCCCTG-TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAA ...x.:.:x.::.x.....::...xxx.x..x...:-..x.x......-:..:.....x:::......:...:...::........x....x.x.:......... 36M1D11M1I56M 72/103 69.9% 104/94230402 0.0% 2/103 1.9% 42195888 NA +3335 chr4 + 190214555 52938263 52938262 52938337 75 AACAGAGAGGTTGAGTAACTTGCCTAAGGCCAAGCAGCCAGTCAATGGCAGAACCATTATTTGAACCCAGGCAGT chr4 - 94230402 29822134 29822133 29822201 64408202 64408201 64408269 68 AACTGAGTGATTGAGTGACATGACTAAGGTCAAGCAGTAAGTCAGTGGCAAAGCTGTGA-------CTAGGCAGT ...x...x.:......:..x..x......:.......:x.....:.....:.:.::.x.-------.:....... 59M7D9M 52/68 76.5% 68/94230402 0.0% 7/68 10.3% 23116129 NA +6118 chr4 + 190214555 52996620 52996619 52996926 307 TGAGAAGAGGGAGAACAAAATGAAATTCTAACTAATCTGGCCCATCTCATCTCAGAAAACCAGAACTCTGTGAATGATTTATGATTCTCCTGACCCTCACAGCAATGCAGATTGTGGCTCTTGCCAAGAACAAATTAGGCTGTCTGCATCTGTTACTTTTCCCAACCAAGAAAATCTCCTTGTGTGAGGA--AGGAGCAAGGTCAGCAGCCAGGACAAAGGATCAACCCAAGAGAAGGAAAAGATAAGGCTGCATTCC--AGTGCTTCTATTGGAAACACCA----CTCACTGGAAGCAAAATCAAGTCTTCTTT chr4 - 94230402 26447268 26447267 26447551 67782852 67782851 67783135 284 TGGGAAAATGAAGAAAGAAGA------CTGACTAATTGAGCCCAGCTCAGCACATA---------TTCT---CATGAATTATGACACTTCTGACCCCCACAGCAATGCAAACTTTCAGATGTGCCAAGAACAAATTAGGCTGTCTGCAGTTGGGACTTCTCCCCAGAAGAAAAAAGTCTTTCTCTAGACATTAGAAACA-----AGCAGCTTTGCCAGTG--------CTGGAGAACACAGAGATAAAGATTCCCTCCCGAAAGTCTCATTTGGAAAATTCAAGGCTTTATCAGAATGAAGATAACAtttttttt ..:...:.x.:....x:..:x------..:......:x:.....x....x.x..x.---------:...---x....x......:x..:.......:............:.:.x.x:xx:x...........................x:..xx....:....x.xx.::....xx..:..x.x.:::x.--..:.:..-----......:xx.x..:x.--------.x:.....x:x.:......:.x.x.x:...--.:x.::..xx.......xx:..----:.:.:::...xx..:..x.x:.:..:... 21M6D29M9D4M3D118M2I7M5D16M8D30M2I22M4I29M 184/276 66.7% 284/94230402 0.0% 39/276 14.1% 26549352 NA +3448 chr4 + 190214555 53007361 53007360 53007423 63 GAGAGAAAGAAGGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGG chr4 - 94230402 69066686 69066685 69066748 25163655 25163654 25163717 63 GGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGG .:....::......:..:..:..........x...x..:.:...::.:.:.x...:.x.:... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% -16059325 -78171077 +20973 chr4 + 190214555 53010953 53010952 53011668 716 CAAACTCTTCAAAATGCCTTCAGGAAATAAA------GGTGACATTTGTTTCTATAGCGTACCTTGAAAAAGCATCCA-------GTTCAA-------ACACTGTTCCAAAGCACTAGCTATGTCTGATTTCATATTTTACATTTGGA-------------------------CTTTATTTTCCCCCTAAAAAAGGCAGAC----ATCAGAATATTA--TGTTTGCCAACTCATGAAACAATTGTTACTATTCTGTATTCTTTCTATGAGGATAGTATTATGAGG--CTGTGCTCATAATAAAACCTTCATCCTAAATCTCTGTGCACCTTATGAATTTCACTGCATCTTTGCTTTTTTTTCCCCCCCAAAGAAGTCATTCAGGTTCCTTTAATAATACCAGTAAATAGCTCCAGCCTTCCACAGCTGCAGAGGTTTACTGTCCTGAGAGATTTTTCAGTGTTACAATTCATGCTTCCAATCAAAACAGTGACAGAGTTGACAGGATTTAGTGAGAAGAAGGACTTGATTAGGAACCAGGACACTACTGAGCAAATATTAAACAACTACAGGGAATTTCTAATATGCAGTGTTCTCTCTGTTCACAACA----------------AAAACAAGCCAGAAACAATTTCCTGTGCTGCAGCTAAGTGAAATGGAAGTTTGTTTTTAAGGTTCCTTGTAGTGTGTTGTGTACATTTCAGCAAAGCCGATTTCACCTATGAGAGGCACTGGCTCCTTAAATAACTCCATTCTTCTCATTTCAAATAGAA chr4 - 94230402 26456255 26456254 26457013 67773390 67773389 67774148 759 CAAAACACTCTCAACACCTTCATGAAAACAAAATTATGGTAAAATTT---TCCAGGATGTTTCTAGAAGGAAAACCCATGCCTTCATTCAACAGGAAGGCAGGTTGCTGAAGCCCTAA--ATGCCTGATTG-ATATTTTGTATTTAGAAATAATTCATGGATGTTAGAATATACTTTTTCTTACGGCGGATAAGGTGAGAACGGGGCTATAATTTTACGTGTTTGCTGTTTTG----ACAATTAGAACAATTCAGT--TTCTGTTACCAGAGTACCATTGTTAAGTGCCGTGCCCGCTATAAAACCTTCATACTAAATCTCTGCACACCTTATGAATTTCACTATGTCTTTATATT------------AAAAAAAAATCTCAGATTCCTTTAATAACAACAGCAAATAGTTCCAGCTTTCCACAGCTGCAGAAGTTTGCTGTCCCCAGAGATTCGCCA-TGGTACAGCTCTTGCTTCCAATCAAAACAGTGACAGAGCGGCCGTGATTTACAGCCTACGGGGGTTTGATTAGGGAACAGCACACTACTGAGCAAATATAAAACAACCAGGCTGAATTTTTAACGTGCAGTGCTTTCTACCCTCACACCACCTCCTCCTGCCCCCCCAAAAAAGCCCAGTACAATTGCCTGCCCCAAAGTGAAGGGAAAGGGTTGCCAGTATTTAAGATTTCTCTTCCTTTGTTGTTGAGATTTCAATAACAATG-TTTGACCCACAACAGAGACTGGTTCTCTAAACAGCTCTATCCTTTACATTCTAGATAAAA ....x:x:..xx..::......x....xx..------...:.x....---..:.x:::..x:..x...::.:x.:...-------:.....-------:..xxx.x.::....x...:--...:......x-.......::....:..-------------------------....x.:..x.xx.x:.x..:.xx...x----:::.x...x...--.......::x:.::----......:xx..x....x..--.::.x:..:x..::..x:...:.x.:.--.:....:.::x.............x...........::..................:::.....::x..------------...:..:xxx:....:............:.x...:......:......:...............:....:......:x.......:x:..-..x....::..x..........................:x.x.:x......xx.xxx.x::..::.........:.x...x..................x.......:.x:xx......:...::.......:.:...x:x:.....x..----------------x...x.....x::x......x....:x.::x..:x...x....x..xx.::x..x......:..:..:x.xx.x......xx.x......::..x:x:.-...x...:.::.x..:x.....:..::....:.:...:..:...:x....::.:...:.. 31M6I10M3D28M7I6M7I20M2D11M1D16M25I28M4I12M2I14M4D19M2D27M2I69M12D90M1D150M16I99M1D60M 479/690 69.4% 759/94230402 0.0% 95/690 13.8% 26554698 NA +16517 chr4 + 190214555 53012723 53012722 53013095 373 AAAAAGGCATCTGCATTTATGGAGTTAATTGACATCTTATTAATTTTGCTCAGATTCTTTCTTTTACCTCCCTCTCCCTCTCCCCTCCTTTCTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTAAGAGAGAGAAAGCTAATGAAAACCATGTTTATATGCTCAAAGGCACAGAGGAAATTCATTACTCTGAGGAATAGCACACTCCACAAGTGAAATGAAAGTAATCTTATTTATGACAGGAAGGGGCCCTAGCTAGACTGAACTCCACCACACTTCCACTGTTAC-----ATAGAAAAGGAGCTGCAGAGCTCCTGCACCAACTCCAAATG-GCGGCCTCACTGA---CAACAAACACATTTGCACTCTGTGTTTGAAAAC chr4 - 94230402 26458456 26458455 26458782 67771621 67771620 67771947 327 AAAGACACATCCGCATTTATGGAGTTAATAGCCTTCTTATTAATTTTACTCAG----------------------CCCCCCCCCCCCCTTT--------------------------TTTTTTAATAGA----AACCTAATGAAAACCATGTTTATGTGCTCAAAGGCACAGAGGAAATTCATTACTCTGAGGAATAACACACTCCACAAGTGAAATGAAAGTAATCTTATTTATGACAGGAAGGGGCCTTCACGAGACTGCGCTCCACCACACTTGGCCTGATACTGGCTGCACGAAGGAAGCTGCAG---TCAGGGACCAACTGCATATGCAAGGCTCCTCCCAATGCAATAAACACACTTGCGATTTAGCTTTGCAAAC ...:.x:....:.................x.x.x.............:.....----------------------...:.:....:.....--------------------------........x...----..x....................:........................................:...................................................:.x:.x......x:.............xxx...x...-----::.x:..:.:........---..xx.x.......x..x...-:x...::.x.:x.---...:.......:....:x.:.:xx....x.... 53M22D16M26D12M4D153M5I18M3D20M1I13M3I33M 266/318 83.6% 327/94230402 0.0% 64/318 20.1% 26554267 NA +7287 chr4 + 190214555 53018623 53018622 53018862 240 TTTCACGCTTGGAGTTTCCTTTATTGCTAGGCCAGACATTTCTGGGAAAGAGACC-CAGCAT-ATCAACCCTGAAGACCAAACACAACCCTCCCAAAGGATGCTTAGGACATCTAAATATAACAAAACTTACGCCAGCCTGACCTTGCTCATTAAGAACAAGACAGTGCATGTGTTCATGCAGGATGCATCAATGATGGTG--TGTACGCTCTTGTTCACCTTTAGACTAAGGAT----AGCCATAAT chr4 - 94230402 26462551 26462550 26462794 67767609 67767608 67767852 244 TTTCAATCCTGCTATTTTCCTCACAGTTAAAATAGGCATTTCCTGAAAGCAGATCTCTGTGTTATCAGTACTGAAGATCATATGTAAACTTTT-GAAGAATATTCAGGAAATATAAATATAACAAAACTCATGCCAGTCTGACCTTGCTCATTAATAAGTATGTAGAGCATATGTTCATGCATAAC---TCTGAGATTGTACTCATACAATCAAATTAACCTTTGGACTGCTGGTGTTCAGCCATAAT .....xx.:..xx:...:.:.:.:x.:..::x:..:......:x.:..:x...:.-.x.::.-....::x.......:..x.:::..x.:.::-:...:..::.:....x..x................:.:.....:.................x..xx.x::..x....:..........x:.:---..x:x...x..:--::...:x..xx:..x......:....:xx.:.----......... 55M1I6M1I30M1D92M3D12M2I32M4I9M 159/236 67.4% 244/94230402 0.0% 12/236 5.1% 26556072 NA +3432 chr4 + 190214555 53028262 53028261 53028309 48 AAATAAATAAAAGAGAAAAAGAAAAATATGAGAGAAATGCTTAAAGTT chr4 - 94230402 54171819 54171818 54171866 40058537 40058536 40058584 48 AAATAAATAAAAGAGAACAAGAATAACATGAAAAAATTGCTTAAAGTT .................x.....x..:....:.:..x........... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -1143557 -93086845 +3087 chr4 + 190214555 53044601 53044600 53044665 65 CTTCCTTCCTCCCTCCCTTCTTCCCTCCCTCCCTCCTTTTTTCCTTTTTCCTCCTCCTCCTCCTT chr4 - 94230402 83441843 83441842 83441907 10788496 10788495 10788560 65 CCTCTTTTTCTTCTCTGATCTTCCCTCCCTCCCTTTTCTGTTCCTTTCTATTTCTTCTGCTCTTT .:..:..:::::...:xx................::.:.x.......:.x:.:..:..x...:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -30397242 -63833160 +7491 chr4 + 190214555 53065857 53065856 53066203 347 AAATAAGTAAGATTGCTGA---CTGAGGTTTAAAAAAGAAAATGATCAACTGAGCCCTTAAATAAAAATACCACATGCTTTTCATCCATTTTCTCACTACTGTATTCACTGAACAGCTCTTATAAGAATAAAACTTTAAGGAATA--TGAACTTGTGGCAAGACCAGAAAGAATATTCTG-GAACTACGCTTT-----GAAGTAAAATGATTCCCCTAACATCAGGAGACTTAATACTACAATTTCACCGTGAAAATAATC-----ACAGATGAATGTTCTGACCAGGACTAATTGTCTTTGAAGTTCTCTAAATTCAAGTATTAAAAACAGTGCTTGACAAAACTCTTTACCTTATCAAAAA chr4 - 94230402 26478227 26478226 26478584 67751819 67751818 67752176 358 AAATATGTAAAACTGCTGAGTTCAGATGTTCACAAAA---CCTGAGTCACTGGATTCCTGAATAAGAACAACAGATGTTTTCCATTTGCTTCTGTGCTACTGTATTTATTTAGCTACCCTGGTAAGAGCAAAATTCAAAAGAAAAAGGGAATGTATGGCAAAACCAAGAAGGAAATCATGAGAACTGGATCTTTATCAGAAAAAAAAAGGCTCCTTT-GCTTGAGGAGCTTTTATGCCACCACTTCTTTATGAAGGAAAACCCCAAACATATCAAAATACTGA-AAGTAACAGACCTTTTTGAAGTTCTGTAAGCACATACATTAAAATAATGGAGTAAAGTAACCCTTTCATTAAGCAAAAA .....x....:.:......---.x..x...:.x....---xx...x:x....::::.:.:.....:..:.x..x...:...:...::::..::x::..........:.:.x.:.x:.:..x:.....::....:.:x..:...x.--x...:x.:......:....::...:.x..:x..-.....:x:::..-----...:x....x.::...::.-:.x.x.....x:..x..:.:..x.:...x:::....::x..x.-----...x..x..x:.x....-x..x.x:.:x:x.:...........x...::x..x::.......xx.xx.xx.:.x:x...:....xx:.x.x...... 19M3I15M3D105M2I33M1I12M5I19M1D43M5I17M1D79M 215/342 62.9% 358/94230402 0.0% 21/342 6.1% 26587630 NA +20393 chr4 + 190214555 53068873 53068872 53069311 439 ACCCTTGTTTAACTTTAGACGGATGTGCACAGTCCAAGGCCAGCAAAGTGATAAATGGGTTTTGGCAGCTCATTCTCCCTACCTTAAGTAATATTACAATGTGTCATTGGAGTGGGTCATTTAGAACAGGAAGCCAGGGACACTCTGTGGTATTCTCCCAGGGTAAATTCACAGATACCTCATAGAAGGCTTTGGCAGGATTCTCAGTATGCACAGAGAGGCATAGAAAGTGGCTTTATTTTTAAGGCTCAGATTCAGCTGAAGGATCCGCTAGGGAATCCAGAGAAGGGAATGCCTGGGCTTGGGTTAAAATAGCTGGTTTATTCTTGCCTTCACAGTGCACAAAAGCTTTACTGATTTG-CCCAGCAGTCATCTGCTAATCTCACACCTTGG-GATAAGTAAGTA-ACACACACACATCCTCATTATGAATGAGTCCACG chr4 - 94230402 26481219 26481218 26481659 67748744 67748743 67749184 441 ACCTCAATTTAACTTCAGACGGATGTGCATGGTACAAAGCCAGTCGAGTGATAAATAGTTTCTGGCAGCTCACCCTTCCTACCTTGAGTTGTATTACAGTTTATCATCAGGGCTGGCCATTCAGCACAGGAAACAGGGGAAGCAGTGTAACGTCGTCTCAGGCTATATTCACAGATACTTCATAGAATTCCTTGGCA-AACAGTCAGCAAGTACTAAAAAGCATAAAAAGTGGCTTTATTTTGAGAACAGACATATCTCAAAAGGATCCGCTAGGAAACCCAAGAGAGGGGAAGCCTAGGCTGGGGTTAAAATAGCTAGTTTATTCACTTCTTCACAGAGCACAATAGCTTTACTGATTCATTCCACAAGTCATTTGCTAATTTTGCACCTTGGAAATGTGTATGGACACACATACAAATTAACATTTGCAGCAAATGCACG ...::x:........:.............::..x...:.....:x:..........:.x..:..........::..:........:...x:.......:.x.:....::.:.:x..:....:..x.......:.x:....x:.xx...::::.:x..:....x..x............:........xx.:......-:.:xx....:.x.:..x:.:.:.....:................x.:::.xx.x..x:xx.x:..............:..:...::::....:.x....:....x..............:........x:x:........x......x.............::-:...xx......:.......:.::........-:..:x...x.x.-.....:...x..:xx....xxx.:::.:.x.... 197M1D163M1I32M1I12M1I34M 317/438 72.4% 441/94230402 0.0% 4/438 0.9% 26587654 NA +3277 chr4 + 190214555 53078628 53078627 53078703 76 TAAGGCAGGTG-CTATTGCTAGCCACACATTCCAGGTAAGAACCCTAAGGTACAGAGAGGTTAAATAACTTGCCCAG chr4 - 94230402 10729182 10729181 10729258 83501145 83501144 83501221 77 TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .:...:....:-:..:.:::...:x..:x..x.....::...xx..:...:...x.x.......:...:........ 11M1I65M 53/76 69.7% 77/94230402 0.0% 1/76 1.3% 42349446 NA +11623 chr4 + 190214555 53128794 53128793 53129388 595 TGTTTATGTGGTGC---ACTGTTTCTATGATTTCACAGAAGGGCTGTGCATTCCCAGTTAGCATGTATCCAATCACATTTTAACTATGAAGAAAACTTTCTTGGCCAAAGATTGAATTCTTTGCAAGGTGGTGATTTGTATGGAAAA--GAACCCCCAAATTGTACATCACTATGTGAGAAGAACAGTACAGATTTGTTTTTCTTAACTACCACAACACAAATAAGGAAATAAAG-AGTTTAG----TCATTTTACAGTATAATTTGGCTTTAAAAAAGCTTCAAAAATTAAAA-----CTCTAAAGCAT------TTTGCATGTTGGGAAATGT---AAGTTGCTAATGAACACTGCACCTCATCAGTTTCCTCTGCCAGTTGGCTTTCT-GTCAGGTTGGCAACAACTCAAGAGCCAGACAGGAAAGTTCAGGCGTGTATCTTGGAAGAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACGAACAGAAAAAAATAGAGAAAGGGGCTTCATTTTGTAAACACTTCAATGAAAATTAATACTCCACTTGGGACCAATTCAGTCCAGGTGCTAAAGACAGAATAAACAAGCAACACATGAAGGCCTAAAAAG chr4 - 94230402 26504964 26504963 26505490 67724913 67724912 67725439 527 TGGTTATTTAATGCTATACCATTTCTA--GTTTGCCAGGCTGGGTGTACTCTGCAAAACAGCAGGAATTTACTCATAATTTTACAATA--------------TGCCAAAACTTGAATGTTTTGCAAGGAAGTGACTTGCATGGAAAGATGAAATGAAGAATTTCACTTTGCCACATACAAAGAAGAGCAC-------CTTTTTAAAAGTTCCCTAATTC-----------TAAAGCAGTTTCTGTTTTCATTTTATGCTTAAAGC-------AAAGAGACATTTAATGTTAGGAGCATCCTCCAAATACTATTGGATTTGCATGCTGAAAAATACCACAAATCATTAATGAAAATTGCACCATATCAGTTTCCTGTTTCAGTTGGCTGTCTTGCTAAGTTGGCAAGAAGTCAGAGGCCTG-CAG--AGCTGCAGGCATATGTCTCATGTTAAAACAGAAAAAAA------------------------------------------------AGACTTTTTGTTATAAACACTTCAATGAAAATTACTATCCAGTTTGGAGCCAACTGAG-CCAGGTGCTGAAGACAAAATAAACAGGCAACATATGAAAGCTTaaaaag ..x....x.::...---..::......--:...xx...:xx..x...:.x:.x.x.:x:....x.x..::.x...:.x...x..x..:--------------x......:x......x:.........x:....:...:.......:--...x:xxx:....x:..x.::.:.::.:x:.....x..:..-------:....:xx..x.x..x:..:x.-----------.....-.....xx----........::x.xx..x:-------...:.::.x.:x..x:...::.-----...:...xxx.------........:..::....::---..:.:::.......x.:......x:...........x.x:.........x...-.::.:........x..x...:::...x.-...--.:x.x.....:.:.:...::x:xx......:..x....------------------------------------------------:.:...:x.x..:.....................x..::.x::....::....:.x..-.........:......:........:......:.....:..:....... 14M3I10M2D59M14D45M2I41M7D22M11D5M1I7M4I18M7D22M5I11M6I19M3I53M1I28M1D3M2D38M48D58M1D49M 347/502 69.1% 527/94230402 0.0% 118/502 23.5% 26623830 NA +25909 chr4 + 190214555 53161509 53161508 53162395 887 AAACAACTTTCAATGGATGCTCAGTTTAAAACATGCATATGTTTTAAGGGAGATATAAACTTTTTTGTAACGTTTTTTCCC-ATCTCTCGGGAAATGATGTTATGCTGTGCTTCAAACAGAACTGCCAAGTTTAAGAGGCTGTTTTCTGTAAACAGGCCAGTTGAGCCGTAAGTTGCATGAAACAAGGGACAAGTGACTTCTTCAGAGAGCAGAACAGAACACCACAGGGAATTGAGAACTATGCATCCAACAAAACC-ACTAGTCATTCGTCTTTATCTGGCTACATTTAATGATTTAAGAACTCTTGTTATCATATTATCATCAATCAATTACAATGATTGAGCAGCCTCTAAAAACCCAGGGTTTTTAAAATGCAACTATCCGTGACCTAAATTTCCTGCTGATTCTGTTGGCCCCAGGTTAGGCCTGTTTGTCTATCATCAAGGGAGCCAATAAAAATAATAAAAACAGGTCAATACTGGGCTTTCCAAAGGCTTTATAAAAATATGCATACTTCTCCAGCCAGTGCCAACTCAACATGTCCACTCTTTG----CTTGAGCTC----------TTGGTAAATTCTGC--CCCTAATTACAAATTACAAATATTTCACAGAATGT-----ACACATTATCTAAAAACCTGCTTATTTTTCCTTTTTCC--CTTGCTTGCTTTTTTTTTTAGTCTGGCTAAGCAACAATTTTGCAACTCTGATCAGGCAACATAAATGATGTCATTTTGCTGTATTCAGCAAAGGAGCTACATCTTGGCAAATTAGGAGATATATGAGAAGATGAGAGTCTAAATTTTAGCTATCTGAATGGAGAATGTGATACTGCTGCACTCCCAAGCCTGTG-CTAGAATCTGACTTCCAGGATCCACA-GAACAAAGCAAAAGTCTAA chr4 - 94230402 26517234 26517233 26518126 67712277 67712276 67713169 893 AAAAAGCTATAATAAGCCGTTAACTTCAGAATGTACATAGGGTCTTTCTGGGGTATGAACTTCTCTGGAATGTTTTTCCCTTATCTCTTGGGAAATGGTGCTGCAGAGAACTTCAAATACAACTGCCAAGTTTA-GAGGCTGTTTTGTATGAACGGGCCAGTTGGATTGGAGCACATATGAAAAAAGGGACGTACAGCTTTGCCACAGCACAG-------CTCCACAGGGAGCTGAGAAATGTGCCTCAAACAAAACCCACTAGCAGACTGTCATTATCTGGCCACCTCTGATGATTTAGGAGTTCCCTGCACCGTGGAACCATCAATCAATTACCCTGATTGAACAACCCTAAAACAC---AACTTTTAAAAATGTAACTACCCATGACCCAAATTTCCTGCTGGTTATGTTGGCCTCAGGTTAGCCCCATTTGTCTATCATCAAGGGAGCCAATAAAAATAATAAAAACAGGTCAATTCTAAGCTTTCTAAGGGCTGTATAAAAACATTAACGCTGCTTAATTCAGAGCCAGCTAAG---GCCCAAGCTCTAATGCTTTCAGCTCAGTTGCATTGTTTGGACATTTTAATGCTATAATCATACACTCTTCAAAATCCAGGGAGAGTCTGTGATAGATT-TCTGTTGTTTTCCATGTCTCTCCTCCACCCTTCTTACTTATTTATTTTTTAACTTAAGCCGTGTAATAATTTACTATCCCTAA--GGGTAAATGAACTGACGTCAATCTGCTGAGTTTTGCAAAAGGCTTGAGTTTTGGCAGA-CAGGAGAACAGTGAAGTAAAAAAATCTTTTTTTCTTTTGTTTTAAATAGTGAACATGATA---TTGTGCTTCAAAATTGACATTTAAAATGTGATTTAAAGGATCAAGAGGAATTAGGAGAAAGTGTAA ...x.:..x.x.xx:.x:.:.x.x..:.:..::.:....x.x.:.xxxx.:.:...:.....:.:..x..:......:..:-......:........:..:.:::xx.x:.......:.x..............-...........x.:.:...:.........::::.x.:xx:::......x.......:x::::...:x:..x..x:...-------.x.........::......x.:...x..x.........-.....:x:x::...x.........:..x.:.:........:..::..::xx:.:.:.:xx.:..............xx.......:..:..::x...x..---::x....x......:.....:..:.....:.............:..x........:........x..::................................................x..::......:..:....x........:..xx.::..x..:x.x:...x....:..x.:---.:...xx..:.:----:..x.....----------..x.x.x...:.:x--.:x....:.:.x.:.x:xx.x.x.:..x:..:x..-----.:.x...-...:xx:x::.x.x.:.:.:....::x:..--...:...::..x......x.x.:x:..::x.:..:.....xx:.x.:..:.--:..:..xxx..x...:....x.:.....x:..:x.....:.:x:.:x:.:......:.-:......xxx:...::x:.x:.:.x::.xxx..:.xx:xx.:.:...:.x...::.....---:..::..:.x..:::x:::-:..:...x...:..xx......x.x.-...:x.:.x:.....x... 81M1I52M1D78M7D38M1I100M3D177M3D12M4I9M10I14M2I35M5I7M1D30M2I51M2D58M1D60M3D19M1I26M1I19M 573/866 66.2% 893/94230402 0.0% 48/866 5.5% 26644275 NA +3016 chr4 + 190214555 53176939 53176938 53176992 54 AACAATCTCAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAGAAAGAGAAACAGGT chr4 - 94230402 16882721 16882720 16882774 77347629 77347628 77347682 54 AACAAGTTAAAAAAAAAAAAAAAAGACAAAGAAAATAGAGTAGGAGTAACTGGT .....x:.x...............:.x........x.:..x.:...x...x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 36294218 NA +24595 chr4 + 190214555 53196216 53196215 53196971 756 AAATAAATTGAAAGTAGGTGGTCTGGTTAGTCTTCACAATGCTACATTTTAATCAGGCAAAGCAGTGAA-AAACATGATTGTCGAAATGCTGGCGTGTCTTCAAACAACAGTGTATGCTGTCCATTTTACTCTCAGTGAAAAAGCTCTTCAAGAGATTTCGATAAAGGTTTCCTTCCTACTTGCAGTCCACATTTGTAATGTTTATATAAGTGGAGGATATAAATCTTTCTCCAATGAACCCCATGGTTTTTAAAGCAGATTCTTGTTATAAACTGCCTGTTTCCGTTTTGCCTGCCTAAGCAAGCCAGGCAAAGACCATTCGCGAGAGACTGGAACTAATTTAATGTGCTCCAGGTTTAAGCCCCTAGCCTCTGCGCCTTTGC-AGGGAGATTTTACACAGTGGATTACTGCTGACTTTAACAATGATTCATATGATAAGTGGCTTTTGATTTGTTT--TTTAATGTCAGAAAATATGCATTGGCAAAAGAAATGTCATTGAAATCATTTCGTTAAAGCAATATCCATAAAAAGGGGTGGGGGAAGGAGAATTCAACTTTTCATCAAAAAAAAAAAAGTCTAAATCATGCCAATGTCTTGTTCACATAAATTTATAGTTTTACTCAATGCAAAAGAATACAAAGC-TATTTAGAGACAGCTAGATTTAAGACTGGATGAACTGCAAGATAGGATTGGTTGAATCGATATACTTTACCACAAAATTGGTTATTATTATT-AAAATACCAAAGCCACACGGAA chr4 - 94230402 26526575 26526574 26527311 67703092 67703091 67703828 737 AAACAAATCACTGGGTGGTGGTCTTGCTGTTCCACCCCGAGCTGTATTTTAATTAGTTGGAGCACTGAGGAAAGATGACTGTACAAATGCTGGCGAATCTTCAAACAAGAGTACACGCTGTCCATCCTATTCACAATGAAAAAGCTCTCAAACGGATTTTGATAAAGATTTGCCTCCTGCTTGCAGCCCACATTTGTAATGTTTACATAAGCGCGGGATATAAATCTTCTTCAATTGAACCCCGCCA-TTTTAAACCAG--CCTTGTTATAAACTGCCTGTTTCCGCTTGGACTGCCCGAGCGAGCAGCGCTGGGCCTGCTTGGGATCGACTGGAACTAATTTAATGTGCTCCAGGTTTAATCCCC-ATCCGCCCAGCTTTGACTGGGGAGACCCTACACAGAGGACCGCTGCTGACTTTAACAATGATTCATGCGATAAGTGGGTTTTGATTGGTTTTCTTCCACATCAGAAAACAC------GCAACGGAACCGCCACAG-AATCACTCCGACAGAACAAGATCGAGCAGACAAAAC---AAAACAAAAGTTAAACTTT-----AACACAGAAGCTGTGGTAATCCTG--AAT---TTATTCGCGCGAATAACCGACTTTCTTTATTCAAAAAGAAAACAACACGTGTCTGTACACCTCTGCGTTT-GGTTTGGAAGGAGGCCAGCAGGCATTCCCTTGCACCGACAGATTGGCTCACGGGGACTGTATTTATTATTAAAAACGCAAAAGCAACGCAGGA ...:....::xx:.xx........x.:.:x..:x.x.x:x...::........:..x:::....x...:-...x....:...xx...........x:...........x...::.:.........::..:..x..:............:x..x:.....:.......:...x.:....:.......:..................:.....:.x:.............::..x.x........::x:-.......x...--:........................:..x.x.....::...:...x:x..x::.x.:::.:.x..xx.................................x....-.x..x.:xx..:..x:.-:......:::.......x...:::........................::.........x........x....--..:x.::........:.:------....x:...x:.:..:x.-.....:.:..x:.:.:...x...x.xx.:.x:::::---::..x:.:.:..x......-----..x.x.:..:xx..xxx....x..--...---..:...:.:::...xxx::::...x:.:.x.xx.......x....x:.-.:.:.:x.x..xx..:x:...-:.x:....x.:.xxx..:x.x:x:x.:xx...x.:...:.x.:.xxx:...::::x:x..xx........-....::.x.....x..:.:.:. 69M1I177M1D11M2D105M1D17M1I73M2I18M6D18M1D36M3D19M5D24M2D3M3D48M1I21M1D70M1I22M 503/731 68.8% 737/94230402 0.0% 31/731 4.2% 26669641 NA +3074 chr4 + 190214555 53248751 53248750 53248813 63 GTTAGAAGGAAAACGAACAAACAGAAAGGACACCCACACCAAAAACCCATCTGTACATCACCA chr4 - 94230402 59596906 59596905 59596967 34633436 34633435 34633497 62 GTGAGAGGGGAAA-AAACAAACAAAAATAACACCCACACAAAAAGCCCCACTATAGAGCACCA ..x...:..:...-:........:...x:..........x....:...xx..:..x.x..... 13M1D49M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% -6348155 -87882247 +3058 chr4 + 190214555 53258549 53258548 53258601 53 TATATATATATATATATATATATATATATACACACACATATATACATAACACA chr4 - 94230402 10572843 10572842 10572895 83657508 83657507 83657560 53 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACATCATACA ..x.........x.x.x............:........x.:.x....x.:... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 42685706 NA +10742 chr4 + 190214555 53273813 53273812 53274004 192 CATAGCAACATACCTGAAGAAGGAGCCTTTCAAAAGCCAGAAAGTTGTCCCACTTGGCAGTCTGTGGGTGTTTCAACGTTTGAGCTGTGGCCAGTCCAAGCTGGAGGAGGCCACAATGATTCATTAGAGCTTTGAGGTTGTTCTTGAAGAGCTGAATATAGGACATGAGCTGTCCCGGTGTGACTCTCCCTG chr4 - 94230402 26544404 26544403 26544594 67685809 67685808 67685999 191 CATAGTA-CGTACCTGCAGAAGTAATCTCTCAAAGGCTAGGAAGTTGTCCCATTTGGAAATCTGAGGGTGCTTCAAAGTCTGGACAGCAGCCAGCACAAGCTGTAGAAGACCACAGTGATTCTCCAAAGCTTTGAAATTATTTTTGAAAAGTTGTACATAGGAGCTGAGCTGTTCTGGGGTGACTCTACCTG .....:.-.:......x.....x.::..:.....:..:..:...........:....x.:....x.....:.....x..:..::.x.::.....:x.......x..:..:.....:......x::.:........::..:..:.....:..:..x.:......xx........:.:..x........x.... 7M1D184M 145/191 75.9% 191/94230402 0.0% 1/191 0.5% 26729409 NA +4776 chr4 + 190214555 53278887 53278886 53279191 305 AAAAAAAAAAAAAAGGCCAGTGACATTTTTAAAATTTTTAA--------ATTTAACCATAACCTTACCAAAAGCAAATGGAAATCAA-CTAATTGACCATCAAAAATGCTGCAGTAAGACTAACCACTGAAGTAAAATTTCT-------TAGTTTATATAAACTAAAACAGCAAGCAACTAGACAAGTGTTGAAAAAGTAATGGACAGAATATTTATTCATACTTCAC--CTTACAAAAACAAGCAAACAAACAAAACCCTTGACAGACAGATTTACATGGTTATTTAAAAATGTCAACCCACCAGGCTTTACAGCACATTTT chr4 - 94230402 26546077 26546076 26546368 67684035 67684034 67684326 292 AAATAAAACAAAAACACACGGAGTATTTATGTGAATTTTAACAGAGCGCATCAAACCGAAAAGTCAGCAAATTAAGACACAAATCAAGCTGAC--ACCACT----------CAGTAGGCCTGAGAGCTGACAAAAGGCTTCTATACAGTTAGTCCGCATAGGCTAAAACAGCAACCACAGCCATGTGTGTTTTTAGACTAAACATCGGAGCTTTCAGACGTGTTTTATTTCTTGTAAAG-------------------CTGTGTCAGGCAGATTTACATGGTGATTTGAAAATGTCAGCCCATGGTGCCTTGCAGCATACCTT ...x....x.....x:.xx.x:::....x.:x:.x......--------..:x....:x..xx.:.x....xxx.:.::x.......-..:.:--....::----------.....:.x..:.xx:....x:x..:::....-------....::::...::............x..xxxxx.::x.....xxx.:.x...xx:x.:..::x..:.xx.:.::..:.:--...::...:-------------------.:x..x...:..............x....:.........:....:x:x..:..:.....:.::.. 41M8I38M1I5M2D6M10D31M7I79M2I9M19D65M 173/274 63.1% 292/94230402 0.0% 49/274 17.9% 26732810 NA +3691 chr4 + 190214555 53283644 53283643 53283722 79 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGGCTCAGCCTCCCAAGAAGCTGGGATTACAGGCGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.::..........x...x..x..........::....x......:.:....--..:x...... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 35086518 NA +3341 chr4 + 190214555 53335169 53335168 53335240 72 CTGGCGACAGAATGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAACAACAAAAAAAAAAACAACAACAACAA chr4 - 94230402 20077998 20077997 20078069 74152334 74152333 74152405 72 CTAGCTACAGGGAAAATTTGCAAGTTAAAAAAAAAAAAAAAAAAGCAGCAACAAAAAAAACCCCAACACcaa ..:..x....::x:.:x:.x.:xx.:..................:..:...x.........xx.....x... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 33257171 NA +3102 chr4 + 190214555 53335175 53335174 53335239 65 ACAGAATGAGACTCC--GTCTCAAAAAAAAAAAAAAAAAAACAACAAAAAAAAAAACAACAACAACA chr4 - 94230402 52251233 52251232 52251299 41979104 41979103 41979170 67 ATAGAATGTGAAATCAAGTCACTAAGAATTAAAAAAAAAAACAACAACAAAAAAAACCACCACAACA .:......x..xx:.--...x.x..:..xx.................x.........x..x...... 15M2I50M 52/65 80.0% 67/94230402 0.0% 2/65 3.1% 1083942 NA +3311 chr4 + 190214555 53335196 53335195 53335242 47 AAAAAAAAAAAAAAAAAACAACAAAAAAAAAAACAACAACAACAACC chr4 - 94230402 85540822 85540821 85540868 8689535 8689534 8689581 47 AAAGAAAAGGAAAAAAAACAACAACAAAAAAATCAATAACAGCAACC ...:....::..............x.......x...:....:..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -32205626 -62024776 +8858 chr4 + 190214555 53352557 53352556 53352770 214 AAGACAGAGAAAGATAAGATGACAAAAACTATATATCTTACCTGGATTGTGAAAGACAGCCTGGTGCAACCACATTATAATTTTCCTCCTCAGTATGGAGTGCAGTGAGCGCTATCATGTTAACCATCACATCATTTGTGTGGCCTGGGAGCTGGGGAAGTGCTGAAATGATCTTCTCTACTAAGTTGTCTCCATGATGTCCAACTGCTCCTGT chr4 - 94230402 26584950 26584949 26585160 67645243 67645242 67645453 211 aaaagaaaaaaaaaacaaaaaacaaaaagaaTGT---TTACTTTGGTTGTGCTAAGCAGCCAGGTGCTATAATACTGCAAGCTTCATCTGGAGTCTGCAGCGCAGTAAGTTCCACCATATTCACCATCACATCTGTCTTGTGGCCAGGAAGCTTGGGAAGCACAGAAAGTATCTTCTCTGCAAGACTGTCACCATGATGACCAACTGCTCCTGT ..:.x.:.:...:.xx.:.x:.......xx..:.---....:.x.:.....xx.::.....x.....x.:x.:.:.::..x:...x..:xx...x..x..:.....:..:x.:.:...:..x...........xx.:x.......x..:....x......::.x....xx.........:.x.:::....x........x.............. 34M3D177M 148/211 70.1% 211/94230402 0.0% 3/211 1.4% 26767607 NA +7949 chr4 + 190214555 53365099 53365098 53365289 191 CTTACCTGTGAGATCCAGGGTTCTGTCCACAAAAACCACTGATGCCCTGCCTGCAGCAGTCTTCTTCCTGTTCTTTGCAGGGGCATAATTGGCCAGATCCGCAGCGATGACCTGACTTAAGGAACCTACAGCAAAACACTCCTCCCGTACTCCTAAATGTTCACACAGAGAACTGAGGCCTGACACTAGGC chr4 - 94230402 26589493 26589492 26589683 67640720 67640719 67640910 191 CTTACCGGCGAGGTCCAGCGTCCTGTCCACGAAGACGACGGAGGCCCTGTTGGCGGCCGCCCTCCTCCTGTTCCTGGCCGGGGCGAAGCCGGCCAGCTCGGCGGCCAGCACCCTGCTGAGGGCCCCCACCGCGAAGCACTCCTCGCGCACGCCCATAGCGCCGAACAGGGAGTCGAGATCGGCCACCAGGC ......x.:...:.....x..:........:..:..x..x..x......::x..:..x.:.:..:........:.x..x.....:x.:::......x..x..:..x.xx...:x:..x.:..xx..:..x..:..:........x..:..x..:.x.xxx:.:x....:..:::...::.x.x...:.... 191M 128/191 67.0% 191/94230402 0.0% 0/191 0.0% 26775606 NA +3394 chr4 + 190214555 53370485 53370484 53370569 85 ATCATAGCTCACAGCAGACTCAAACTCCTGACTTCAAGCAATCCTCCGGCCGCAGCCTCTTGAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197118 18197117 18197199 76033204 76033203 76033285 82 ATCATGTTCTACAGC---CCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:x:::.....---.:x..:..:...:x......::x.:.x.x..x.x......:.::.......:.:......x...... 15M3D67M 57/82 69.5% 82/94230402 0.0% 3/82 3.7% 35173367 NA +3108 chr4 + 190214555 53373651 53373650 53373722 72 CTGCAACCTCCTCCTCCTGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCTGAGTAGTTGGAATCACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xxxx..:...........:.x...x:xx.x........::::.....:.....::...x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 35176525 NA +5702 chr4 + 190214555 53377767 53377766 53377928 162 GGGGCTGCGAGGCTGGGGAAGGGGTTGGAGGGGGCTGTTGATCGCCGCGTTTAAGTTGCGCTCGGGGCGGCCATGTCGGCCGGCGAGGTCGAGCGCCTAGTGTCGGAGCTGAGCGGCGGGACCGGAGGGGATGAGGAGGAAGAGTGGCTCTATGG-CGGTACG chr4 - 94230402 26594188 26594187 26594343 67636060 67636059 67636215 156 GGGGCCGCCGAGC-GGGGAAGAGGCCGCGGAGCCC----GGTCCGGGCGCTGGCGTCCCGCGGGAGGCGGCCATGTCTACCGGCGAGGTGGAGCGGCTGTCCACGGAACCT--CGGCGGGGCCGCCGTGGACGAGGAGGAGGAGTGGCTCTACGGCCGGTACG .....:..x::..-.......:..::.x:.:.xx.----.:..xxx...:.x:x..:x...xx.:............x:..........x.....x..:x:xx....:.:x--.......:...xx.x...:........:...........:..-....... 13M1D21M4D72M2D42M1I7M 111/155 71.6% 156/94230402 0.0% 8/155 5.2% 26783579 NA +3676 chr4 + 190214555 53379196 53379195 53379271 76 TTTATTTAT-----TTGTTTATTTTACTTGGTAGATGAAAATGAAGTTGAAAGGCCAGAAGAAGAAAATGCCAGGTTAGTG chr4 - 94230402 26595617 26595616 26595697 67634706 67634705 67634786 81 TTTATTCATATCTGCTGCATGTCTTTTCTTGCAGATGAAAATGAAGCAGAGAGACCAGAAGAAGAAAAAACTAGGTGAGTG ......:..-----:..:x.:.:..x::.x.:..............:x..:..:..............x:.:....x.... 9M5I67M 57/76 75.0% 81/94230402 0.0% 5/76 6.6% 26783579 NA +9445 chr4 + 190214555 53383768 53383767 53383887 120 TGTAGAAAGTGACTGAGACCGAAGATGATAGTGATAGTGACAGCGATGATGATGAAGATGATGTTCATGTCACTATAGGAGACATTAAAACGGGAGCACCACAGTATGGGTAAGTTATTT chr4 - 94230402 26600409 26600408 26600528 67629875 67629874 67629994 120 TGTAGAAGGTGACtgaggctgaggatgacagtgatagtgatagcgatgatgatgaagatgatgTTCAAGTCACCATAGGAGATATTAAAACAGGAGCTCCACAGTTTAGGTAAGTTATTT .......:.........:.:..:.....:...........:..........................x.....:........:........:.....x.......x.:............ 120M 107/120 89.2% 120/94230402 0.0% 0/120 0.0% 26783359 NA +5277 chr4 + 190214555 53389747 53389746 53389879 133 ATTACTGTTTTGTTTAAGCTT----TTCAGGATAATTTCTGTTTTTTTT-TGTTTGTTTGTTTTTAGGAGTTATGGTACAGCACCTGTAAATCTTAACATCAAGACAGGGGGAAGAGTTTATGGAACTACAGGTAAAA chr4 - 94230402 26602557 26602556 26602694 67627709 67627708 67627846 138 ACTGTTGTTTTGTGTTTTCTTCCGTTTTAGAGTTTTCTCTGTCTAATTCACTTTTGTTAATTTCTTTAAGTTATGGAGCAGCACCTGTGAACCTCAATATTAAGACAGGAGGACGAGTTTATGGATCTTCTGGTAAGA .:.::........x.xxx...----..:..::.xx.:.....:.xx..:-:x......x:...:.xx:........x:..........:..:..:..:..:........:...x...........x..x.x.....:. 21M4I24M1I88M 95/133 71.4% 138/94230402 0.0% 5/133 3.8% 26787190 NA +7757 chr4 + 190214555 53390380 53390379 53390655 276 TAGTAAAAAGATGTTTGTTTTCTGTTTGTGTGTGTATATGTGCCAGGAATAGTAAAAAGGTGTTTATATTTTCTGTTTGT-----CTATGGTATCGCCTGGCTTCTTGCAAGTATA----GCTCCTTCATTTTGTAATTTTATAAAACAGGGACAAAAGTCAAAGGAGTAGACCTTGATGCACCTGGAAGCATTAATGGAGTTCCACTCTTAGAGGTAGATTTGGATTCTTTTGAAGATAAACCATGGCGTAAACCTGGTAAGATTATTGTGGATTATATTAATT chr4 - 94230402 26603711 26603710 26603960 67626443 67626442 67626692 250 TGGAACAAATCTGTTCGTTTTTTGTTTTTGTTTGT-------------------------TCTTTTTATTTTAAGTGTGTTACAACTATTAAAACTCCT----CTTAGCAGAGACAAAAAGCTCATT---TTTCTAACTTTTCTTAGCAGGTGTAAAGGTGAAAGGGGTGGATTTAGATGCACCAGGAAATATTAATGGTGTACCACTTCTGGAAGTAGATCTAGATTCTTTTGAAGATAAACCTTGGAGAAAACCAGGTAA---TGTTCTGATTTATGTTAACT .:.x.x...xx....:.....:.....x...x...-------------------------.x...x......xx..x...-----....x:x.x.x...----::.x...::x.:.----....x..---...x...:...x:xx.:....x::...:..x.....:..:..::.x........x....::........x..x.....::.:..:......:.:....................x...x.x.....x.....---.:..x..:x....:....:. 35M25D20M5I14M4D13M4I7M3D132M3D20M 176/241 73.0% 250/94230402 0.0% 44/241 18.3% 26786669 NA +23280 chr4 + 190214555 53390997 53390996 53391781 785 TTTTATCTTTAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAATGAAGATACCTGGAAAGCTTACTGTGAAAAACAAAAGAGGATACGAATGGGACTTGAAGTTATACCAGTAACCTCTACTACAAATAAAATTACGGTAATTAATAAATACTCCGGAATACCCTTGGCTTGTCTACCGTCCCACTTTTACTCCCCAAATAAATCGCTTCCCTATAAAAGTGGTTAAATGCTATATGATAGTTTAAAAATTCCATTTTGT------TTACCATGTTTGTTTTTCCCTTCCCTCCCTT----TTAGAGT-TTCGTATTTAATGATTATCTGATGTTCTTACTTTCAAAT-----CACAGACTAGCCACAGCTAGTTTGTCTTTATA--------------TGGCCTATTAATTAAATATTATGTGGTATCTTAATGGGGAATATGTTATTTAACTTAGGCCGAAGACTGTACTATGGAAGTTACACCAGGTGCAGAGATCCAAGATGGCAGATTCAATCTTTTTAAGGTGAATTTTAGTAAATTATCCTTGGTTGCTCTCATTTTTTGTTCTTGAGT-CTGCT-CCCATGCCACTACTCAAGGGACAAGATTAAAGTGGAAATAGCT--ACCTTTTTTCCAAACCTTCAGCTTCC--TGGTGACTTAC-----------AAATTTGCTGAT-------TGTTGTTTTA-TCTCCACTTTTGCAAGCATGTGAATTTATAGCCTATTATACTAACAAATGCCGAGTAAAACTATTGTTTGCTATATGTTGTGATTTCATTTTGAGTCGTAATACATGTTTGTA---GGATAGAAAAGTT chr4 - 94230402 26605023 26605022 26605809 67624594 67624593 67625380 787 TTCTATTCATAGGGGCTGATTTATCTGATTATTTCAACTATGGGTTCAATGAAGATACCTGGAAAGCATACTGTGAAAAACAGAAGAGAATACGAATGGGTCTTGAAATTTTACCAGTTACCTCAGCCACAAATAAAATTACGGTAAGTACTACA------------------ACTTTTGTGGTGTTGCACATGCTTTTCCC--------------CCTGTAAAGCTGCTTGTGTGTCATAAGCTTGTTTTG----CCCAGTCAGTGGTTTGTTGGTAAGTCTGCACCTGAGTGCCCACTCCTAAACCTAGAGTGTTCTTGTGT--TGCTTCCCTGGCAATTTG---TGTGGATAGCGGCACAGCCTACTTAGAGCTAGATTGCATCTGTACCATCACTCAAATGTGGCCCATGGGTTAAAAGTTGCGTGGTATCTTAATGGGCAATGTGTTATTTAACTTAGGCTGAAGACAATGCTATGGAAGTAACATCAAGTGCAGAGATTCTCGATGGCAGATACCATCTTTTTAAGGTGAATTATAGTAAACTTTTGTTGGTTGCTCTCATTTATG----TTGAGTATTGCTACCCATACCAACACAGACCGATAGAAGAACAACTGGAAAAGACTCAGCCATTATTTCAAACTCTCATCTTACATTGGTGACTTTCTGCATATGTCAAAAAATGCTAATTAAAAAGTGTTGCTTTGTTCGTCATCCTTGCAAGCGTGTGAGTTAGTGGCCTGGTGTACTAATGAACTTCCA----------TTTTTTCTTTATGCGATGATGT-ATTTTCAGTTGTAGTGCATTTGTTTATGCAGATTAAAGAATT ..:...::x....x......:.x...........:..:........:....................x..............:.....:...........x......:..x.......x.....x:.:...................x..x..x.------------------:...x.x.:x:..:x...x.x:x:.:...--------------...:....:x..x..:x:..::...x.x.x....x:----:...x.:x..------..:x:.x..:..:x::.xxx.x...x.:.:.----:......-...x.:.x.--..x..x:...:::x.:.x---.x:::..-----.....x...x::.x......x...:x.:.:..--------------.....:..x::.....x:..::................x...:.................:......x:.:..........x...:..:..........:.xx..........x.x..................x.......:.x.:x................x.x----......-:....-.....:...x:..xx.xx.:xx:.::xxx..x......x::..--:..x..x..:.....::...x...x.--.........x.-----------...xx....:..-------.....:...:-..x:..:::........:.....:..x:.:....:x.:......::..:x:.x.----------.x...x..x....:x:....x.-.....x...:...:.:...x.x.x..---:...x:..:.:.. 155M18D29M14D36M4D10M6I31M4I7M1I9M2D18M3D7M5I32M14I167M4D6M1I5M1I43M2I26M2I11M11I12M7I10M1I54M10D22M1D26M3I13M 529/729 72.6% 787/94230402 0.0% 114/729 15.6% 26785974 NA +7649 chr4 + 190214555 53399702 53399701 53399863 162 AACAAGCTAAT---AACCTTTTTTTTTTAAGGTACAGCAGGGAAGAACTGGAAACTCAGAGAAAGAAACTGCCCTTCCATCTACAAAAGCTGAGTTTACTTCTCCTCCTTCTTTGTTCAAGACTGGGCTTCCACCGAGCAGGTTAGTTACATAGTTATAACTCAA chr4 - 94230402 26607710 26607709 26607874 67622529 67622528 67622693 165 AACAAACTAATGATAAAATGTTATTTTGAAGGTACAACAGGGCAGAACTGGAAATCTGGAGAAAGAGCTGGCAGTGCAGTCGACCAAAGCTGATTTCACATCTCCTCCTGCCTTATTCAAATCAGGAATTCCAACAAACAGGTCAGTTAGACGGTTGTAACTCAA .....:.....---..xx.x..x....x........:.....x...........::::........:x:x..xx.x.x:..x..x........x..:..x.........x.:..:.....:x.x..:x.....x.:.:.....:.....x.::...:........ 11M3I151M 120/162 74.1% 165/94230402 0.0% 3/162 1.9% 26791992 NA +7534 chr4 + 190214555 53414556 53414555 53414729 174 ACAAGGGG--GGTCAGAGACA-ACAATATGTAAGAAAAAACATAGAAAATTTATCTCACCAGAAACAGCACTTCTTCTCAGTCTCAGACAAGTACTGCCTCCAGAAAAGCCAATTCAAGCGTTGGGAAGTGGCAGGATCGATATGGGAGGGCCGAATCACCTGATCTAAGGTAAGGC chr4 - 94230402 26609272 26609271 26609433 67620970 67620969 67621131 162 ACAAGGAGCTGATTAGAGACACACAA---------------AGAGACAATTGATCTCACCAGAAAGAGTGCCTCTCCTCAGTCAAAGACAAGCACTGCCTCCAGAAATGCCAGTTCAGGCATCAGAAAGTGCCAGGAATAAAACAGGAGGGTTGAGTCACCCAAATTCAAGTAAGAC ......:.--.:.:.......-....---------------.x...x....x.............x..::.:...:.......xx.......:..............x....:....:..:.::.:.....x.....x::.x.::......::..:.....::.x:.x.:.....:. 8M2I11M1I4M15D136M 121/159 76.1% 162/94230402 0.0% 18/159 11.3% 26805284 NA +3199 chr4 + 190214555 53417677 53417676 53417768 92 TTCCACAACAGATACCCTGGATAAAAGCTACTTTTTCTCTTTGCTACTTTTTCTCTTTTTAAACACACACACACACACACACACACACTCTC chr4 - 94230402 44143171 44143170 44143245 50087158 50087157 50087232 75 TTCAAAAACAAACACCTCTAATAAAA-----------------TAACTGTTTCTTTTTTTAAATACACACACACACACACAAAAAAGCCCTC ...x.x....:.:...::x:......-----------------:x...x.....:........:.................x.x.x:.:... 26M17D49M 57/75 76.0% 75/94230402 0.0% 17/75 22.7% 9274506 NA +7255 chr4 + 190214555 53425859 53425858 53426006 148 TTTTATGTTACAGGAGATTACCTGGGGCAATTGATGTTATCGGTCAGACTATAACTATCAGCCGAGTAGAAGGCAGGCGACGGGCAAATGAGAACAGCAACATACAGGTTTAGTATTTTAAAATAAATAATTTTCTTTAACTGAAGGA chr4 - 94230402 26615975 26615974 26616122 67614281 67614280 67614428 148 TCTTGTGTTGCAGGCGATTATCTGGTGCAATAGATGTGATTGGACAGACCATCACTATCAGCAGGGTAGAAGGACGACGACGTGCTAATGAAAACAGCAACATACAGGTTTTATATACTGCAGATTTACACTATCTTCAACTAAAAAA .:..:....:....x.....:....x.....x.....x..:..x.....:..x.........x.:........xx.:.....x..x.....:...................x:...x:.:x.:xxxxxx.:.x....:....:..::. 148M 109/148 73.6% 148/94230402 0.0% 0/148 0.0% 26809884 NA +12158 chr4 + 190214555 53427976 53427975 53428231 256 ATCTTACATAATATTTATGCATCTGTTTAATTAACTGTGCTCTAATTTT----AGGTCCTTTCTGAAAGATCTGCTACTGAAGTAGACAACAATTTTAGCAAACCACCTCCGTTTTTCCCTCCAGGAGCTCCTCCCACTCACCTTCCACCTCCTCCATTTCTTCCACCTCCTCCGACTGTCAGCACTGCTCCACCTCTGATTCCACCACCGGGTAAATAGTAAATAAGACATTTGACTTTGAAAGAAAAATAGCTTGCGA chr4 - 94230402 26617061 26617060 26617313 67613090 67613089 67613342 253 ATCCTCTACACTTTTTACGTAGCAATTG---TAACTACAGTTTGATATTTTACAGGTTCTTTCAGAACGATCTAATCCTGAAGTAGACAA---TTTTACCAAGCCACCTCCATTTTTCCCTCCAGGAGCTCCACCTACTCACCTTCCACCACCTCCTTTCCTCCCACCCCCTCCAACTGTCAGTACTGCTCCGCCTCTGATTCCTCCTCCAGGTAAATATTCAGTCCCACA-TAGACTTTGGAAAATAAGAGGCTGATGA ...:.x:.:.x.x....:.:.x.x:..x---.....:::x.:.:..x..----....:.....x...x.....:x.x.............---.....x...:........:....................x..:..............x.....x..:..:.....:.....:........:........:...........x..x..:........x.x.:.xxx...-.x.......:..:.x..:x:...x::.. 28M3D18M4I37M3D138M1D28M 192/249 77.1% 253/94230402 0.0% 11/249 4.4% 26810915 NA +3635 chr4 + 190214555 53440565 53440564 53440658 94 CATCACTTGTT----TTTTAGGTATTCCAATAACTGTACCACCTCCAGGTAAAACTTTTTTCATGTTTTCTCCATCATTG-TTAATAAACATGAAATTT chr4 - 94230402 26620600 26620599 26620698 67609705 67609704 67609803 99 CGTTATTTGTTATCGTTTTAGGTATACCAATAACAGTACCACCACCAGGTAAAGTTGCTTAGAATTTTCTTCCACGTTTGATTAAAAAGTAAAAAACTT .:.:.:.....----..........x........x........x.........::.x:..xx.xx...::....:xx...-....x..::.x:...:.. 11M4I65M1I18M 69/94 73.4% 99/94230402 0.0% 5/94 5.3% 26819965 NA +6305 chr4 + 190214555 53444027 53444026 53444170 144 ATATATCTTTTTCTTCAACAGTGGACATTCCTCTGGTTATGATAGTCGTTCTGCACGTGCATTTCCATATGGCAATGGTAAGTAGTATTATTTAGATGCCTAGATTCAGTTTGAATCAGTAAAGTACTTGAATATTTTTAAAGC chr4 - 94230402 26623545 26623544 26623682 67606721 67606720 67606858 138 ATATATTTTCTTCT-CAACAGTGGACATTCCTCTGGCTATGACAGTCGTTCTGTTCGTGCATTTTCATATGGCAGTGGTGAGTAG----GTTTGCACACTTTGAAACATTTTT-ATTAGTATGTTGTCAAATTGTTTTAAATGC ......:..:....-.....................:.....:..........:x.........:.........:....:.....----:...:x.::.:.x..xx..x...x-..:....x:x.:::x:.x.:....x..x.. 14M1D70M4D24M1D30M 105/138 76.1% 138/94230402 0.0% 6/138 4.3% 26820482 NA +12758 chr4 + 190214555 53452870 53452869 53453139 270 GTTTTTTTAAAGTACCATAACGT-TTGTTTTTAAT-----CGTGTTTTTTCTTTAGTTGCCTTTCCCCATCTTCCTGGTTCTGCTCCTTCGTGGCCTAGTCTTGTGGACACCAGCAAGCAGTGGGACTATTATGCCAGAAGAGAGAAAGACCGAGATAGAGAGAGAGACAGA------GACAGAGAGCGAGACCGTGATCGGGACAGAGAAAGAGAACGCACCAGAGAGAGAGAGAGGGAGCGTGATCACAGTCCTACACCAAGTGTTTTCAACAGGTTTGT chr4 - 94230402 26628891 26628890 26629171 67601232 67601231 67601512 281 GTTTTCTTACGGTATCTGATTTTGTTCTTTCTAATACCGGCGT-CTTTTTCTTTAGTCACCTTTCCGCACCTTGCAGGTTCTGCTCCTTCATGGTCTAGTCTTATGGACAGCAGCAAACAGTGGGATTACTATGCACGGCgagagaaggatagggagcgggacagagatcgatctcgggatcgagatcgcgaccgggaccgagacagagatcgagaacgtaccagagacagggaaagggaccgagaTCACAGCCCGTCTTCGAGCGCGTTCAACAGGTTAGT .....:...x:...:.xx.x:x.-..x...:....-----...-:............::.......x..:...x.x..............:...:........:......x......:........:..:.....xx.:x.......:..:x.:..xx.:..x.....:x..------..:x....x..x.....x..:..:........xx.......:........x..:..:.....x..x........:..xx.x:.:..:.:x...........x.. 23M1I11M5I3M1D128M6I104M 205/269 76.2% 281/94230402 0.0% 13/269 4.8% 26823979 NA +10697 chr4 + 190214555 53456566 53456565 53456917 352 GTATATGTTGCTTTACAAATTACAGGGCCATTGTTTTGAAAATTACAGGCCAGTTTCAACTTCTGTTTTTTAGGGAGCTTAATTATGGGCCAGAAAGAAGGCTGGTCATTCTAGGATGTTTGAAATGAACTCTAATAATTTCCAGGTCCAGAGAAACCTTTGTGGTTCAGCC--ACTTATCAGAAAAGGGGATGGAAGGAGGAGGGTCTTTATATTTTGTGTGTAGGACCCAATCTTCTACCATCTGTTATAAGGTTCCCATCACAGGGCTGCTTTCAGAATCT-AAAGGCTCCAGGTTCAACAAGAGCTGGTTTTAGGGT-------AAGAGGAAAAAGAGTTAACAAATGACACATTATG chr4 - 94230402 26630123 26630122 26630470 67599933 67599932 67600280 348 GCATGTGCTGC-------GTTACATGGTCA--GTTTCTAAGAACTCAGCCCAATCTAAACATCTGTTTCTCAGACAGCTTGATTGAAGGCCAGAAAGGAGCCTGGTCATTCAAGGGTGCTTGAAATGAACCTTAATAGCTTCCAGGCCTGGAGAAATCTCTGTGCTGCTGCCAGAGTTATCTGCAAAGGAGGGGGAA-GAGCAGG--CCTCAAGTTTTTTTTATGTGACTAAATTATCCACCATCTGCAGCAAAGCTGTTGCCACATGGCTATGTTAAGAAAATGGGAGGCCTTTAGCTC-ATATGAGTTGGTTTAGGAATCGCAGAGAAGGTGGAAGTGATTTAAGAAA-GACAGAACATG .:..:..:...-------:.....x..:..--....:x..:.x:x...x...:.:.x...x.......:.:..:x.....:...:x:..........:..x..........x...:..:...........::.....::.......:.::......:..:....x.x.x...--.x.....x.x.....:.:x....-...x...--.:.:.x:....x.x.:.:x...:x...:x..:........:x::..:.:.x::::....x....::x..x....xx.-::....:::x:.:..-.:.x...:......x:.::.-------...:x.:..:x..x....x...-....x.x:... 11M7D12M2D140M2I23M1D7M2D77M1I15M1D20M7I22M1D11M 232/338 68.6% 348/94230402 0.0% 24/338 7.1% 26826443 NA +19638 chr4 + 190214555 53458622 53458621 53459614 993 TGTCAAGAAAACATTTCTATTTCAATTTCAGCGATGAAGAACGATACAGATACAGGGAATATGCAGAAAGAGGTTATGAGCGTCACAGAGCAAGTCGAGAAAAAGAAGAACGACATAGAGAAAGACGACACAGGGAGAAAGAGGAAACCAGACATAAGTCTTCTCGAAGGTTTG-----------CTCTTTAATAAAATAGTGAA-------CCA----------ATAGTATGT--------------------------------GAGAGATTTTGACTTACTACATTGTCGCATTGGAAGAGG--------GGAAATTTTGGCC---TATGAACCAGTCTTGCT------TGGTTTCATTAAAGAAAAATTCAGGGCCTTGTCTCAAATTTTTTTAAAAAAGCATTAA------ACAAAATACCTA---TTGTTTGCCAAAAA---------TCAACCCTATA-----CAGTATTTCCGGTTTTGAGT----TAATGCCTGTTTCTAATTTGTT--------ACTGTATATTATAATATGCATT---TCAGAAGCTGTGTATAGGCACTGGGAATCTGAGATAATATCAGTGAAGATGGCCCTA------TAAAATAAATACAATCCCTGC-------ATAAAAGTCACATAAAACTGATTATTCCTCACAT---------------TATAT-TTATGAGAAAATGCATTAGATTATTTTAA--ACCCAGTGTTATATTGAGA---ATTTCCTTAGAGTGATTGGA----------------TTTT-------------------TGTCACTGATTGTGTATTTAAACAGAACACACCTT-------------------------TTTTTTTTTTTTTTTTTTCCAGTAATAGTAGACGTCGCCATGAAAGTGAAGAAGGAGATAGTCACAGGAGACACAAACACAAAAAATCTAAAAGAAGCAAAGAAGGAAAAGAAGCGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGC----ATGGTTTTGGCCTTTTG---TGTATATTAGTACCAGAAGTAGA-TACTATAAATCTTGTTATTTTTCTGGATAATGTTTAAGAAATTTACCTTAAATCTTGTTCTGTTTGT-TAGTATGAAAAGTTA--------------------------ACTTTTTTTCC-------------------------AAAATAAAAGAGTGAATTTTTCATGTTAAG chr4 - 94230402 26632253 26632252 26633491 67596912 67596911 67598150 1239 TGTCCTGAAAAGATCTTCTTTTAA---TCAGTGATGAAGAACGATACAGATACAGAGACTATGCAGAAAGAGGCTATGACCGCCATAGGACAAGCAGAGAGAAAGATGACCGACACAGAGAGAGGAGACACAGAGAGAAAGAAGATACAAGACACAAATCATCTCGAAGGTTTGatttattttttttttttaataGGATACTAAAGACTTAACCAGCTTAAAAAAATAATTTCTTAAAAGAACCCCAAACAAACTGGAGCTCTGTGGAAAGACTGTAAACTCTTAGATGTACTACTTGGAACAAGTCTGCTGTATAAAATGTGGACAGACAAAAAGCGGTGTTGGTGAGGGGTAACTTCAT-----ACTGATGCACGTGACTGTCTTACATAGTGAACAGAAATGATGAATTTGGGGAAAAAAATCTAAAATGATGGGTCAGAAAGAGGTAGAGTGAAGCTGACATTCGTCAGCATTAACA--CATGAATGTAGTGAAATCCATCTTAGTTTCGCTCCATAGGAATTGTTCATCTTGATCCTTTTTGACTTAGAAA-----TATAGGGGAAGGGGAT---GAATAAGAACGTTAAGGGTAGTTGTAGGGACGTGACATAACTAGAATTATCACTATTAGGATATGGGTTGCA--AATCTAAATATTACTCAAATATCGCAGTAAAAAAGTACAGGCTGTGTGAATGTACATACCACTACTTGAACAATTCAGCTCGATTTTGATGCCCAGCTTCTATGTGGGACAGAACAGGAGCAGGCGCCACTTTTCAAGTACGAACGCAAAGGCTGTGGTTTTCAGTGCTCTTAAGAAGGGGGGGCCTGAAGTGTCATGCAATGGCTTGAGGTGTATTTTCCCTCTTTTTCTTTAGTAACAGCAGACGCCGCCACGACAGTGAAGAAGGGGACAGCCACAGAAGGCACAAACACAAAAAATCCAAACGAAGCAAAGAAGGAAAAGAAGCCAGCAGTGAACCAGCTCCTGAGCAGGAAAACACTGAAGCTGCCCCCGCGGAATAGGCCTGTGTGATTTTTGCCTATTGGCATATATATTAGTGCCAGAAATAGATTCCTATAAATCTTGTTATTTTTCTGGTTA---TTAAAATAATTTGTTCTTAATCTTGTTCTGTTAGTACGAGATGGAAAGTTACTTGGTTTTGGTTTTGGTTTCGGTTGGCTTTTTTTCTGTTGGGTTTTTTTTTTTTTTTTTTGAGAATAAAAGAATAAATTTTTCACATTAAG ....xx.....x..:.::x...x.---....:.......................:..x..............:.....x..:..:..::....:x....:.....x..x.....:.....:..:x.......:........:..x..x.....:..:..x.............-----------:.:.......::...x.:..-------...----------...:.x.x.--------------------------------..:...:.x.:.x:.x:..x..xxx.xxx......x.:.--------:x...x.x...x.---:.x:..x.:..x...x.------.:::.....-----.xx:..x..x.xxx:.....:.x..xx.xxxx.:...xx..x..------:x....x.:...---.x:.xx.:..:...---------.x..x.:x.:.-----...:...xx.:--:x...:.----.:.x::.::.:.:x:x..:.:.--------.:...x:..:x.:..x:x:x..---.:....:-----......x:xx...:..---::....x.x.:x.:.:.:.:.::x..------.:.x....x..x...:x:::.-------...x::..::..--..x..:.x....x....x..---------------..:.x-:.:..x...x:.:...xxx.:..:..x..--.::...:x:x..x....x:---.x:.:..xx.x.x..:x.:.----------------....-------------------...x::.xx:x...:x:....:x..::x:x:...x-------------------------.x....:::.:.....:.::.....:..:.....:.....:..x...........:..:..:.....:..:.................:...x......................x:.......:..x..:.....:.....:.:...:......:.x..:..:........----:..:....x....x...---.:.........:......:....-.x........................x..---..x..:x.....::::.x..............x..-:::x...:.......--------------------------:.........:-------------------------.:.........:.:.........::..... 24M3D147M11I20M7I3M10I9M32I39M8I13M3I17M6I9M5D44M6I12M3I14M9I11M5I11M2D7M4I22M8I22M3I7M5D16M3D26M6I21M7I12M2D20M15I5M1I29M2I19M3I20M16I4M19I35M25I172M4I17M3I23M1I29M3D35M1I15M26I11M25I30M 675/970 69.6% 1239/94230402 0.0% 292/970 30.1% 26826369 NA +16334 chr4 + 190214555 53460900 53460899 53461603 704 ATTGATTCTATAAAAAAGTGCCAGGCCAAGAAACAATAGTTAGAGTAATTCTTCCTTTAAGTTCTTTCAGCAGTCTTGCCAAGCAAGCATGTATCATTCCTGATGTACTTCTACCATTGACAGCAAGAAGAATATCACCACATCTAAAAAAAAAAA---CAAAACAAGA---TATGAT-----------------------------TAGTATTTTAATTCGTTG-----------------------------------CTGAAGTTAATGCAA-----------------------------------GTTTATCTTAGTGGTGC-TAGATTTTGCTACATCTGA-----CCATTTTA--ATTATG-----------------------TTAACTTCTAATTGAGATAT--------------------TTCTTGCCTCTTATTTACATTCTCCAAACTCACTATCCATTCAGCTTGTGTTAGAAGGAATGCTAAAAG-----TATGGGGAGTTGTAGTATGGGACCAAGAATATGTGTAATTATTTT--GGAT------------TTCTCAGAAGTTGAATGCTACGTACATACTTTTAATCCCCACAAAGTAT-AATAAAT----------------ACATGCCTTATCTCAAATGGGGCCAAG-----------CTTTGGCATTTATGAAACAACATTTAATACAAGTATTTTT------------------------GATTAGTCA--------------TTATTATTACCTAATTCTTCCATCATTGTATGCTGGTGTTCCTTCAACAATGGATTTGATGAAAAAAGGTTTGTTTCCATTGTATTCTTCATAACCTCCTACAATGCAGAAGCCCAGACTTCCAGCTGTGTTTCTTCGTAATACAATATCTTTACAGTTATACAAGCACCTGAAATAGA chr4 - 94230402 26634810 26634809 26635739 67594664 67594663 67595593 930 ATTTGTTTTATAAAAAAGTGCCAGGCCAGGAGACAATCGTGAGAGTGATTTTTCCTTTCAGTTCTTTGAGCATCCTTGCCAAGCAGGCGTGCATCATTCCTGATGTGTTTCTGCCATTGACAGCAAGGAGGATATCACCGCATCTGAAAAAACAAAAGGCAAAACATGAGAATATGAAACAAGGGCACTTCTCCTTGGGAAATGCCACAGTATGTCCATTCATTGGGTAGGAGGAGTGTCACCATACCTTCTCAGGCTCACTGCTGTTCATGAATAAGGGAACAGCAGCATAGAGCAGtgtcctatcactgtctgcctaagtaaaaagttgattcccctccttcttataatccccttttaGTATTGTGCTTGGATGGTTTTGTTGTTTGGTTTGGCTTTTATTTGAGCTTTGGGGTGTAGGTAAGCTTCTCTGCTGGCATTCTTTTTACTGCCCTAGAAATCAACCTG-ATGCATCTTATACTACA--GATTGCTAAGAAAGCTATCCAGAAAG----ACTCTAAAATTAAAGTTAAATCTGTTTATGTTCAGGACGCTTGTGTCCTGTTTTCAGAGCTTAA---TTCTGTGCTCCATTGAGCTCACTAGAAAGTCTTAATTAATTTGTTAATATGAAGAAGTATGCTTGTCTTCCTACCTGTCAGAGGATTCCTTTTATTTCCCCATTCA-----CAGCATTCAAGTAAAGCTTCTTTAACAAATAAAAAACCTGGATGAAAGACTACTCAGTGAGAAGTAGCATTTACCATTACCTGATCCTTCCGTCGTTGTATGCTGGTGTTCCCCCGACAATGGATTTGATAAAGAAAGGTTTGTTCCCGGTGTGTTCTTCATAGCCTCCCACAATGCTGAAGCCGAGGCTCCCGGATGTATTTCTTCGTAACACGATTTCTTTGCAGCTGTACAAATACCTGAAACAAA ...x:..:....................:..:.....x..x.....:...:.......x........x....x:...........:..:..:..............::....:..............:..:........:.....:......x...---.......x..---.....x-----------------------------:.....x.:x....:...-----------------------------------...xx...x...x.x-----------------------------------..:.::..x...::x:x-.x....::x..x.x...x.-----..x.....--...:..-----------------------..::...:..x.....x.x.--------------------.x..x..x.::.x.....xx:.::x:..x...x:x.x-..x..x...:.::..x.--..x......:.:-----.x::.::..----.x.x.:::.::..::x..x:.x.:x....x..--...:------------..:.....:x..:.---:.x:..:.x:xx..xx:x..x.:.x.....x.-...x...----------------::....:.xx::..xx.:xx.x.x:..-----------:..:xx....:.-----..:....:..xxx...:x.:...------------------------..:..x...--------------...::.......:..:.....:..:.................::.:..............:..:...........:..:x...:.........:.....:.......x......x..:..:..:.x...:...........:..:..x.....:...:.:.....::........:.:. 156M3I10M3I6M29I18M35I15M35I17M1I19M5I8M2I6M23I20M20I37M1D17M2D12M5I9M4D32M2I4M12I14M3D32M1I7M16I27M11I12M5D23M24I9M14I179M 495/689 71.8% 930/94230402 0.0% 256/689 37.2% 26826090 NA +3248 chr4 + 190214555 53472625 53472624 53472745 121 TTTTCTGTATTAAATCATTTATTTGAACAATGATTTATTCAACAACAACAACAACAACAACAAAAAAAAAAAAAACAAAAAACAATGGGGAAGTAAAGGACTCTTTGCAATATAATTGATG chr4 - 94230402 12139712 12139711 12139827 82090576 82090575 82090691 116 TTTTTTCAATAAAGGCATTCCCCTGTTCAAT---TTA--CAACAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAAATCACACCTAAATGTATCAATGATG ....:.xx..x..:x....:x::..xx....---...--...........:.........x...:.::.....x.x..::..x..x::....:x...xx..x.:.x:xx:...x.x..... 31M3D3M2D82M 78/116 67.2% 116/94230402 0.0% 5/116 4.3% 41332913 NA +3351 chr4 + 190214555 53472642 53472641 53472706 65 TTTATTTGAACAATGATTTATTCAACAACAACAACAACAACAACAAAAAAAAAAAAAACAAAAAA chr4 - 94230402 56474464 56474463 56474528 37755875 37755874 37755939 65 TTTATCTGGGCAGGAATACACACAACCAGCCCAACAACAACAACAAAAAAAAAATGAACAAAAAA .....:..::..:x:..x:.:x....x.xxx.......................x:......... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% -3001822 -91228580 +3127 chr4 + 190214555 53472658 53472657 53472704 47 TTTATTCAACAACAACAACAACAACAACAAAAAAAAAAAAAACAAAA chr4 - 94230402 67415458 67415457 67415504 26814899 26814898 26814945 47 TTAATTAATTAAAAACAACAACAACAACAAAAAAAAAAAAAACAGGA ..x...x.x:..x...............................::. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -13942800 -80287602 +3012 chr4 + 190214555 53472667 53472666 53472702 36 CAACAACAACAACAACAACAAAAAAAAAAAAAACAA chr4 - 94230402 29762489 29762488 29762524 64467879 64467878 64467914 36 CAACAACAACAACAACAGCAAAAAAAAAAAAAAAAA .................:...............x.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 23710178 NA +11259 chr4 + 190214555 53476579 53476578 53476984 406 GCATGCATTTTCAGTTACAAATGGGA-------AGAGAGAATTATTTCACAGTCCCACAACCAAGACTGGGTCTAATTAAGATGCTAGTGCCATGAATCAGCCCTAGAGAGTGAAAGAGTGGTTTAAGAAATGTAATCGTTTTCTCCCACGCCCCTACAG-----GGATGTTGTGTTTGGACTTACCGTGGTAATTCCAGCCACATGACCCAGGATGGGGACCAGTCACTGGGTGGGGCCATGTTGTGGTTGGAGTCCAGGGCTGCTGGGCTGCT--GCAGTCTTCCTGGGGCTCATACTCTTTGACTTCCAAAGCTTTGAGTACTATCGAGGATGATGTTCTTTTCAATAATGCCACTGCCTCACTCCGGCTGACCTCTGTCAGTTCGACCCCATCCACATTCAACAAAATGTCACCTG chr4 - 94230402 26641561 26641560 26641932 67588471 67588470 67588842 372 GTACACATACCCACTTACAAAAGGGAGGTATTTAGAGGAAAGTCTGTGACGG-----------AGCCTGGGTTTAATTAACATGTCAGGGCAATGAATCAAGCCAAAAGAG----AGAACTGCCAGAGAACACAAATC-TTTCCTCCCACTCCCCTTCAGCGGGAGGCGGCCGCTGCCGGACTCACCGGGGCAGCCCCAGCCACGTCACCCAGGACGGCGACCACTCGCTG--------------------------------TGCTCGGCGGCCTCGCTGCGCTCCCGGCCATCACATGTCCTCATCTCCAGGGCCTTGAGCACCACCGAAGAGCTGGTGTTTTTCAGCAGGGCTACAGCCTCGTTCCGACTGACCCCTGTCAGGTCGATTCCGTTCACATTCAAGAGGATGTCACCTG .:.::...x::..x.......x....-------....::..x.x.x.x..:.-----------..x......:.......x...::..x..x........:x..x.:....----...::x.::x:....xxxx....-...:.......x.....x...-----..xx.::.:xx::.....:....x..:.:::........:.x........:..x.....x..:...--------------------------------....x...x..:--..x.:x:...:..xxx...:.:x:::.x.::....::..:.....:..:.:...:..xxxx..x:......::.:x..:..x.....::....:......:.......x....::..:.:.........x.::.......... 26M7I19M11D48M4D23M1D21M5I66M32D12M2I143M 246/358 68.7% 372/94230402 0.0% 62/358 17.3% 26835018 NA +10017 chr4 + 190214555 53478545 53478544 53478734 190 AAAATCCCTTTACTTTTTACCTGTTTTTATTCTTCCATCTCTGCTTATGACTCCTCCGGGCTCAACACTGATGACATAGATAGGCAAATCCCATTCTCTATGTGATGCTCCCCCTGCGACGGTCATGCCGAGAGATTCACCGGGGTCTTTTTGGATATTTACCACCTTCTCATGACAAGTAATTGTAGGA chr4 - 94230402 26643253 26643252 26643441 67586962 67586961 67587150 189 AAGATCCCCAT-CCTTTTACCTGTTTTTATCCTGCTGTCTCTGCTGATAACTCCTCCCGGTTCAACGCTTATCACGTAGATAGGCAAATCCCATTCTCGGTTCGTTGCTCCGCCTGCCACCGTCATTCCCAGTGATTCCGTGTGATCTTTCCGGACAGCCACCACCTTCTCGTGACAGGTGACAGTGTGA ..:.....:x.-.:................:..x.::........x..:........x..:.....:..x..x..:......................x:.x:.x......x.....x..x.....x..x..x.....xx:.x.:.....::...:.x::...........:.....:..:.:x..:x.. 11M1D178M 144/189 76.2% 189/94230402 0.0% 1/189 0.5% 26835292 NA +6705 chr4 + 190214555 53481662 53481661 53481873 212 CAGCCTTCCCAAGAAATAGCCCCTTGCAGGAGCAGGCGACCTGCCCTAGAGGCCTCACCTTGGGAGTGTTGCTCCTCTCCCCTGGCC----CTGGGGACCAGCTGCCATTGCTGTTCCAGCCGGCTTCCTGAAAGATGTCAGGGCTCCGCTGCCGAACCTGGCGGGACACGACGAGGTGAACACGTCTTTCACTGGCCTGGGCAAGAAGACACAGG chr4 - 94230402 26648310 26648309 26648516 67581887 67581886 67582093 207 CAGCCACCCCAAGG--TCCCCCTTCCCAAGGACAGCAGAGCAGAC---GTGGCCTCACCTTACTGGCATTGATCCTCTCAGCAGGACAGGGCTGGGGAC----TGCTGCTGTAACTCCATCCCGTCTCCTGCAAGATGTCGGGGGGCTGCTGCCTGGTCTGCCGCGATACCACAAAGTGGACATGCCGCTCACTGGCCTATGGGAGGAGGCACAGG .....x:......:--.xx...:.:x..:.::...xx..x.x.x.---.x...........:xx:.::...x.......xx.x..x.----........----...:::..:x::....x..x.::.....x........:...xx.:......x:::...x..x..:..x..:.:...:...:.:.x:..........:x.x:..:..:...... 14M2D29M3D39M4I8M4D113M 138/203 68.0% 207/94230402 0.0% 13/203 6.4% 26833352 NA +3206 chr4 + 190214555 53493058 53493057 53493116 59 CTCCCGAGTTCAAGCAGTTCTCCTACCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.:.......::x...x.xx:x........::.............:....x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 35295919 NA +19435 chr4 + 190214555 53496016 53496015 53496401 386 GACTCACCTGAATCAGATGAGCCGCACTTTCTGGGCTGCCATATCGAAGATCATGTCCATTGATGGCTAACACACGGTCATTCTCCTCAAGCTGACCATGTCGATATGCCACACCGCCATCCAGCACATTGAAGATGAAAACCCCAGGCTCATCCACCTTGCGCACCAGTTTTATTCCAAGCTGCTCCTCGGGGCTACTTTTGTTGAGAATCACATGAAAGCTGTCATCTCGGGGTCTGTAGGCATCCGGGGCCTGTCCATTGTTCCTGCTGCGGAACTTCTGTTCACGCATCACAGTCAGCCACAGCACCTGGCAGGGCTGCCGCAGGAGACGCACAGCGTAGTTGTGAGGGACATTGCTGATGTCCATCCCGTTGACCTGGGGG chr4 - 94230402 26652996 26652995 26653381 67577022 67577021 67577407 386 GACAGACCTGGATCAGCTGGGCTGCGCTCTCCGGGCTGCCGTATCGATGGTCATGCCCATTGATGGCCAGGACCCGGTCGTTCTCCTGCAGCTGGCCATCACGGGCAGCCACTCCTCCATCCAGCAGGTTGAAGATGAACACACCAGGTTCGTCGGCCCTGCGTACCAGCTTTATCCCTAGCTGCTCGTCGGGGCTGCTTTTGTTCAAGACGACGTGGAAGCTGTCGTCCCTGCTGCAGTGAGCGTCGAGGCTGAGCCCGCTGCTTCGGCACCGGTACCGCTGCTCCCTCAGCACCGTGAGCCGCAGCACGTGGCAGGGCTGCTTCAGGATGGACAGGGCGTAGTGGTGAGGCACGTTTTTGATGTCCATGCCGTTCACCTGGAAG ...xx.....:.....x..:..:..:..:..:........:......x.:.....:...........:.:x..x.....:.......xx.....:....xx..:xxx.....x..x..........x:...........x..x.....:..:..x:..:....:.....:.....:..x........x........:........x.::.:x..:..:........:..:.x.xxx.x..::..:..x:..x:xx.:..::..:.:.x..xx...x..:x...:..x.x..x...x..x....:......x............:x.....x:x:..x:.......x......x..:..x:..........x.....x......::. 386M 283/386 73.3% 386/94230402 0.0% 0/386 0.0% 26843020 NA +13276 chr4 + 190214555 53498561 53498560 53498871 311 ATCCATCTAT-CCAATTGTTTGCTCAGAAGCATTTTTTTATATCAAGCCCCTTGCTGCAGCCCCACAGCCACAGTCTCTACCTTTAGAATGATGTCTCCTGGCAGTAGCCGGCCGTCTCTGGCGATCACCCCATCACGATAAATGTGTTGGATAATGATATGGACCAGTGGGGTTTCGCTACCTCCCACCAGCCTAATAGAGAGGCTTTCACTGGGATCTACTCGATTGATCTTGATGCTGGTAATTTCACCATCTGGAATCAGGTGGTACAACCTTGGAAAGACT-GAAATGGACA---AAGAGTGTTTATTTAA chr4 - 94230402 26654651 26654650 26654954 67575449 67575448 67575752 304 ATCCATTTATGCTTACTCTTTGTTAGGATATAATTTTTTTTTTTA-------TCTTGTACTCCCAC-----CATACTGTACCTTTAGTATCATGTCTCCAGGCAGCAATCTTCCATCTCTGGCAATTACTCCATCTCGATAAATATGCTGTATGATAATGTGAACCAAAGGAGTCTCGCTGCCTCCCACAATCCTAATGGCCAGGTTCTCATGGGGATCAGTCCGGTTGATCTTAATGCAGGTGATTTCACCATCTGGAATCAGGTGATACAATCTGGGAAAACCTGGAAATGTACATCGTAAGGTATTTATATGA ......:...-.:x.:.x....:.x:..x::.x......x.x.:.-------.x:..:.x:.....-----..xx..x.........x..x........x.....:.::.xx..:........:..:..:.....x........:..:..x..:..:..:..:....:x..:..:.....:........x.x......:.xx...:.:...:x......x:::..:........:....x...:.......................:.....:..x.....:x..-......x...---x.::..:.....x.:. 10M1I34M7D14M5D215M1I10M3I16M 222/299 74.2% 304/94230402 0.0% 17/299 5.7% 26843910 NA +8624 chr4 + 190214555 53507325 53507324 53507500 176 GCAGTGGTGTTTTCAGAATTTTCCCTGCCCTGGTCGGCATGGTTGGCAACTGCACTCCCGCTCTTTGTCCTTCGAAGAACACTCAAAGCTCGATTTATTTTTTTAAATGATCTGCTTCTAATAGTGGATCTCTCAAAGGGCCGTGCTGAGGAATAGCGACAGGAGGAACAGTAGTT chr4 - 94230402 26663475 26663474 26663648 67566755 67566754 67566928 174 GCAGCAGAATTTCCAACAGCCTCCCTTTCCTGGTCAACCTGGTTGGAAACCGCACTTCCACTTTTTGTCCTTCGAAGAACACTGAATGCCTTGTTTATTTTTTTAAAAGATCTGCTTCTTATAGTGGAGCGTTCAAAGTGTCGAGCTGC--AAGAGCAGCAAAAAAATCAATGTTT ....::.x:...:..:x.x::.....x:.......::.x.......x...:.....:..:..:....................x..x..::x:..............x...........x........x.x:......x.:..x....x--..x...::..::.::.x..:.:x.. 149M2D25M 128/174 73.6% 174/94230402 0.0% 2/174 1.1% 26843850 NA +10871 chr4 + 190214555 53507881 53507880 53508259 379 ATTTCCCCTTAAAAA----ACATTTACAGAACTTTCCACAGTAAGTATTCCACAGAGGGCAATCGCAAGCCAAGGAGCCCA--TTCCCGGACAACCACCCATTTGA---CTCACCCCTAGTTCGGTTGCTCCGGCCAGAGTCCACTGGGCTGATTGCTGGCTGCCCGTCCTCTGCCGAGGACACGTAGGCAGGGTTGTCTAGGCCAGGCTCGTCTGTCATTAAGGAGATGGTGGCAGCTGCAGAAACCTCTGGGGAGGGAGCCGTGGCTGTGAGGCTCGCACAGCCGTCTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTGGTCAGGCCGTAGTGGGAGGCACCTTTACAGCTGTAACAGAACCAGCGGGGAGGTGAAGAAGA chr4 - 94230402 26665013 26665012 26665382 67565021 67565020 67565390 370 ATTTTTCTTTAAAAACCCAACAT--------CCTTCACCAACAAGCGTTTCACAGAAAACAGATGCTGGAAGAGGCCGCCAGGCTCCCA---AACCAGCCCTTTGGGTCCTTACTTCTGTTGCGGTTGCTGCAGTGCAGGTCCCTGGGGCCACTACCCGACTGGCTGTCCTCCGAGGTGGGGCTGAAGGCTGGGTTCACCAGCCCCGGCTCGTCGGTCATTAAGGCGATGGCTGCAGCTGCGGAGAGCTCGGGACCCAGAGCAGCGACTGCCAGGCTGGAGCTGCGATCCGGGGAGCAGTCCTGGGAACGCCGCTTCCGCTCCTTGGTAAGGCCATAGTGGGATGCTCCTTTGCATCTG-AGGAGAA------GGTAGGGAAAGGAGA ....::.:.......----....--------.:...xx..::...::..:......:::..:x:..x:.xx:...xxx...--:....:---.....x..x....:---..:..::..:x.x........x.:.:xx::....x:x....::x.xx.:.:...x.:......:.xx.x..:xx:.x....x.....xx.:..x..x........x..........x.....:x........:..:.x...x..:xxx:....x.:.:...:x.....x.x:.x..x:..:..:x...x:..:..x..:....x.....xx..:.....x.....:........x..x.....:..x...-.:x....------..x...x:...:... 15M4I4M8D50M2I6M3D14M3I250M1D7M6D15M 243/361 67.3% 370/94230402 0.0% 27/361 7.5% 26842868 NA +3045 chr4 + 190214555 53526740 53526739 53526798 59 AAAATTACTCTCTTTTCTCTTGAACTTTTGTAACCTCTGGAACTTATCAGTTGTGAATT chr4 - 94230402 50000945 50000944 50001003 44229400 44229399 44229458 59 AAAAGTACTCTTTTTTTTCTTGAACCTTTCAAATCACTTCAGCTTCTCACTTGCGAATT ....x......:....:........:...xx..:.x..xx.:...x...x...:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 3525795 NA +17023 chr4 + 190214555 53557821 53557820 53558333 513 CCCCAACATACTAGGCACATAAACACACAGG-CACGGACAGAGAGGGGACTCACAGTTCTGAATACAGGAAGTGCAGGTTGCCCACATTGTCAATGTAGTTAGCAGGACTGAGCCAAGGCAAGACCAGCAACAGAAGCGCCTTCATTCTCCGAGCAG-------------TGTGCTGCCTTCTCCCTGGCCACCTTCTGTCAGC-----------TACAAGGGCCCAAACCAGCCAAGCTCCTT-TAAGCAAACCTTGCCATGCCCCCACAATCAGTAGATCACAAAGAATTTGACTGAGAACCTTCAGATTAAGCCACGTTAATAAATCACGGGCCCGTAAGAAGATTATGCTCTCTGATTCTCAGATGAGAGGATGTAGGAACGCAAGGAGCCACCACGG-----TTGGCGAGAGAG---CTTAGGCTG-AGAGCAGGCAAGCTGATGCCCAGGAAAGGAACCAGCCCCTCCTGCAGGATGCGGACTGGTTCTTGGGAAGCAGCTGGTACATTTACATCACCGGCTGGGAGCAGACAGGCTGGGAG chr4 - 94230402 26691868 26691867 26692406 67537997 67537996 67538535 539 CCCCACCACTATGGTGAGACAGACAGACAGAACACGAGGACCGCGCGTACTCACAGCTCGGAGTACAGGAGGTGCAGGTTGCCCACATTGTCTATGTAGTTTGCAGGACTTAACCAGGGGAGGACCAGCAGCAGGAGAGCCTTCATTCCCAGCGCTGATGGCACCGCTGCCAGGTTTCCTCCTTCCCGCTCGCTCTGTGCGGGTGGGACACGCAACGCGAAGCTCTGTGCCGGCCAAGCCCCTTCTAAGCCAGCCTTCCCATTTCAACGCAA-CGGTAGCACATTACGAATTGAGCTTAAATCCCATAAACGAGGCTACACTGCAAAATCATTGACCTGTAAGAGGATTACTCGATCTGACTCTCAGACGGGGAGTTGTGAGGGTTTAGGGA--CAGCACAGCGTGCTTGGCGAGACAGTGACTTATGCTGCAGAGCAG---AGC-GATGCTCAGGGAAGAGACCTG--CCTCCTGCACGATTCAGAGTGGTTCTTCGCAGGCAGCTGGTAGGTTTACATCACTGCCCACCAGCAGATGGGTTACGAG .....x..:xx.:.xx.x.:.:...x....:-....::x.xx.x.x.x........:..x..:.......:.....................x........x........x.:...:..x.:........:...:..x..........:.x.x..x.-------------::x.:.x...:..:..:.x:.:.::.x..:x:.:-----------::.:.:.x:.::x:..:.......:....-.....x.:....x....x:.xx.:...-.:....xx..:x.x.....x::..x.:.x..:x:.:.:x.:..:..::.:xx......:x.:..:......:.....:x.xx.....:.......:.:.::.x...::.:::x:.:...--..x...:.-----.........x..---....x....-.......---...-.....:....:...::...x.--.........x...x.:..x........x.x.:..........x:..........:.x.::xx......::..:.:x... 31M1I125M13I34M11I29M1I27M1D119M2D8M5I12M3I9M1I7M3D3M1D21M2D79M 351/504 69.6% 539/94230402 0.0% 44/504 8.7% 26865953 NA +3819 chr4 + 190214555 53571098 53571097 53571177 80 CAGCCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCTTGGGCCACCATG chr4 - 94230402 18197129 18197128 18197206 76033197 76033196 76033274 78 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:xx:x..:.............x...x..x.x........::...........:.:....--.x..x:....::.. 64M2D14M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% 35373969 NA +19129 chr4 + 190214555 53573617 53573616 53573968 352 ACCTACCTGGTTTGAAAGTGATGCTCGAGGTCACAGCGCTGCAACACCTGGGTGCAGTGCTCCCTGAATGGGCAGGTCACCAGTAGCTTGTTGAGGAGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTGCTGCAGAACCAGAGGCTTGCGGTCCATGGGACAGAAGTCCTTCTCCACCAGGAAGTTGGTGAGGCAGAGGGTGCAGTAGGTGTGTCCACACGGAGTGTCCAGGGGGTCCAGCAAAGCCTGCAGGCAGATGTGGCAGATGAGGTCATCATCCACTTCCTCTGGATAGCTGTAGAAGTGGTTTTCCTCCAAGGAGTGGGCTTGGCCACACACTGCACACAGGG chr4 - 94230402 26695536 26695535 26695887 67534516 67534515 67534867 352 ACTTACCGGGTTTGGAAATGCTGTTCAAGGTGACCGCGTTGCACAACCTCTGAGCAGTGTTCTGTGAAAGGACAGCTAACCATTAGCTTGTCCAGGAGGTTATTCACCAGTATGCTGGACTTCCTGCAATTCTGGAGAGCCACCAGCTTGCGGTCCATGGGGCAGAAGTCTTTTTCCAAGAGGAAGTTCGTAAGGCAGGCAGTGCAGAAGGTGTGACCGCAGAGCGTGTCTAATGGCTGAAGCAAAGGTTGCAGGCAAATGTGGCAGATCAGATCATCATCTACTTCCTCAGTGTAGCTGTACAAGTGGTTTTCCTCTGGTAAATGTGCCTGGCCACAGGTGACACAGAGAG ..:....x......:..:..x..:..:....x..x...:....xx....xx.x......:..:x....x..:...x.x....x........:x.....x..:..x.....x............:....:.x...x...:...xx:................:........:..:....xx........x..:......:x:......x.......x..:..x:.x.....:.:x..x.xx.......x:........:...........x..:........:........x.x:........x..............:::x:.:..x..:........x::x:....x..:. 352M 268/352 76.1% 352/94230402 0.0% 0/352 0.0% 26878081 NA +3501 chr4 + 190214555 53576163 53576162 53576287 125 CATGTTGCTGACTTTCAGTGGTGGGTGGATGTGACAATCTCCAC-----CAGTGCCCTGGCTCGCTTCCTGCAGCCGAGGGTCCTGATGCAGCTGAAGCTTTCAGATGGGTTAGCATACCGCTTCGAGGT chr4 - 94230402 77377921 77377920 77378047 16852356 16852355 16852482 127 CATGCTGCTCGTGTTTATTGTTGTA---ATGTAATAATGTAAATAATTGCAGTTCACTGGCCCGTGCTCTTCAACCATCCATTTTAATGCTGATGAAGCTTTCAGACGGGACAGCTCATCGCTTTGAAGT ....:....x::x..:.x..x..x:---....:.:...x.xx.:-----....x.x.....:..:x::..x..:..:xxx:.::.:....x.x.............:...x:...x:.:.....:..:.. 25M3D16M5I81M 79/122 64.8% 127/94230402 0.0% 8/122 6.6% -23801758 -70428644 +4432 chr4 + 190214555 53576280 53576279 53576392 113 TTCGAGGTCCCCATAGCCAAGTTCCAGGAGCTGCGGTACAGCGTGGCCCTGGTCCTAAAGGAGATGGCAGATCTGGAGAAGAGGTGTGAGGGCAGCCTGCAGGACTGACCCCT chr4 - 94230402 77382247 77382246 77382359 16848044 16848043 16848156 113 TTTCAGGTGCCAGTTGCAAAGTTTCAGGAGCTGAGATACAACGTAGCCCTTATCTTGAAGGAAATGAATGATTTGGAGAAAAGAAGCATACTGAAAATCCAGGACTGAACGCT ..:x....x..x:.x..x.....:.........x.:....:...:.....x:..:.:.....:...:xx...:.......:..:x.::x:xxx.:xx.x.........x.x.. 113M 76/113 67.3% 113/94230402 0.0% 0/113 0.0% -23805967 -70424435 +14372 chr4 + 190214555 53622291 53622290 53622709 419 AAGTTCTTTAGAAAACCTATTGACTTTTCAAAGTGCGTGG--------ATTAGAAA-TACTGACAATTTTCAAACCACTAGCCTTGCATTTTAATGTCCCGGTGTCGCAGGAGTGAACAGTAAACCTCTGTTGCCACACACTGGG--CCACTCAGCACACATGAAGTGTGTCAACCTGATTGGCGTGGCGAGACCACAGCTCCCCTTGT---TCCCTCCCTCACTCTCTCACCCCAGGGCTAGCAATGGACCATTATCTCCAATTTTGACATCTGAAGAGAAAATCTGGATGCCAGGAAGGAAGTTTTTCCAAATTGGTATAAAAAACGCC-----AAATCCTCT--------TATTACAACAGGATACAGTAAAT-ATAACAAAGGAGGAAGTTCATGAGATTGAAAAGGTTTAAAAGTGTAAATGAAAAATACTTCTGAGAAAAA chr4 - 94230402 26719174 26719173 26719602 67510801 67510800 67511229 429 AAGTTCCTTGGGAGATCTGTTGGCTCT-----GTGTGTGGGGAGATGGATCAGAAAATACTGACAATTTTCAGAATGCTTGCCCTGAATTTCAATGTCTCCTTCTTGTCCTGGCTAACAGTGCACTACTGTTGGGACACACTGAGTGCCTCACACCACACGTGAAGTGTGTCAACTTGCCGAGTGTGCGGGGACTGCAAATTCCTTTGCACACCCCTCCCT-----TCCCAACACA---CCAGCAATGGGTCATTATCTTTGATTCTGACATCTGAAGAGAGAATGCAAATGTCAGGAAGGAAGTTTTTAGAATCTGTAAAAAAATACTCTATAAAAGACCTTCCAAAGGGAATATTGCAACAGGATACAGTAAAGAAAAACAGGAGAAGAATT---TGAGGGGGAGAAG--CTCACACTATAAATGTGAAATACTTCTGAGAATAA ......:..:.:.:.:..:...:..:.-----...:....--------..:.....-...............:.x::..x...:..x....:......:.xx.x.:.:xxx:.:x......:x..:x......xx........:.--..x.x..x.....:..............:..x:x:.:...xx.:...::..:x.:..:...:---:........-----..:..x.x..---.:........::........:::...:...............:...x:::...:................xx..x:..xx.x....x..x.:-----.:.:.:..:--------....:.................x-.x....:::..:...x.---....:xx..:...--:.x.x.x.:......x:...............x.. 27M5D8M8I8M1I88M2I62M3I9M5D10M3D92M5I9M8I23M1I17M3D13M2D35M 293/401 73.1% 429/94230402 0.0% 46/401 11.5% 26903117 NA +3101 chr4 + 190214555 53631354 53631353 53631439 86 TCAGCAGAAAGAGACCTGCTAAAGAAGACCTGAAGAAACAAATGATTCCTGAAAATCTAGTTCCACTTTACATTTGATAGGAAATG chr4 - 94230402 66565066 66565065 66565151 27665252 27665251 27665337 86 TCAACAGAAAAGAACCTTCTCAAGAAGAACTGAAGATGCATGGCCTCTTTAAGGATTTTGTTCCATGTTATATTCTTATGGAAATG ...:......:::....x..x.......x.......x:..x:xxx.:::.:.::..:.x......:x...:...:xxxx....... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% -12933712 -81296690 +3450 chr4 + 190214555 53634320 53634319 53634392 73 TGCACCCTCCACCTCCTAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:..x..:xx.x..:..:........::x...x.xx.x.....:..::.:.........:......x...... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 35437193 NA +3021 chr4 + 190214555 53636168 53636167 53636210 43 ATCTATTACTCCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTC chr4 - 94230402 20596761 20596760 20596803 73633600 73633599 73633642 43 ATCTAACACCTCTTTTTTTTTTTTTTTTTTTCCCTTCCTTTTC .....x:..::....................:::......... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 33039407 NA +3174 chr4 + 190214555 53670803 53670802 53670907 105 CAATTCCTATAATATATCTTTTT-----------TCCTTCCTTCCTCCCTTTC----------CCTTTTTTCCTTCCTT--CCTTCCTTCCCTCCCTTTCATTTCTTTTTCTTTTTGTTCTTCTCTTT chr4 - 94230402 83441780 83441779 83441907 10788496 10788495 10788623 128 CAATTCCTATAGGCTATTCTTCTGATTCTGGCATTTATTCTTGGTTCTGTGTCAGAGCTAAAACCTCTTTTTCTTCTCTGATCTTCCCTCCCTCCCTTTTCTGTTCCTTTCTATTTCTTCTGCTCTTT ...........:xx...::..:.-----------.:x...:.xx:..:x.x..----------...:....:....::.--:.....:...........:x.x.:::.....x...x....x...... 23M11I19M10I16M2I47M 75/105 71.4% 128/94230402 0.0% 23/105 21.9% -29770977 -64459425 +3955 chr4 + 190214555 53670820 53670819 53670943 124 CTTTTTTCCTTCCTTCCTC------CCTTTCCCTTTTTTCCTTCCTTCCTTCCTTCCCTCCCTTTCATTTCTTTTTCTTTTTGTTCTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCCTCTTCTTCTTTTT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGT---GTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTC--TCTGTAGCTTCTTCTTTCT ..:::.......x.x.:..------.:x.:..:::........::..:::..::x......x.---:..:.x...:xx..:..xx.....x..................--...x:xx..........:. 19M6I38M3D43M2D19M 83/119 69.7% 125/94230402 0.0% 11/119 9.2% 10588920 NA +3258 chr4 + 190214555 53670820 53670819 53670909 90 CTTTTTT---CCTTCCTTCCTCCCTTTCCCTTTTTTCCTTCCTT---------CCTTCCTTCCCTCCCTTTCATTTCTTTTTCTTTTTGTTCTTC---TCTTTCT chr4 - 94230402 81339729 81339728 81339833 12890570 12890569 12890674 105 CTTTTTTAAACTTTTTTTCCTCCCTTTCTCTTTTTCCCTTCCGCCAGGACTCACCTCATTTTTCATGCTTTGATTATTCATTCTGTTTGTTCTTAGAGTCTTTCT .......---.:..::............:......:......x:---------...:x:..::.x:x....x...x:.:x....x.........x---....... 7M3I34M9I42M3I7M 68/90 75.6% 105/94230402 0.0% 15/90 16.7% -27668909 -66561493 +3518 chr4 + 190214555 53670821 53670820 53670974 154 TTTTTTCCTTCCTTCCTCCCTTTCCCTTTTTTCCTTCCTTCCTTCCTTCC---CTCCCTTTCATTTCTTTTTC------TTTTTGTTCTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCC-TCTTCT----TCTTTTTTCC----------------TTTTTTTTTCCCTTTTTCTGTTTCTCTG chr4 - 94230402 28459086 28459085 28459269 65771134 65771133 65771317 184 TTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTG ..x..x.:...:x.x....:.x:::x..:.:...:.:.:....xx.x..:---:..x..:.x...::.:....------.......x...:...:.....:x:.....:.:....:..x-......----.x...:..x.----------------..:.x.:..:x:..x::.....:..... 50M3I20M6I40M1I6M4I10M16I28M 103/154 66.9% 184/94230402 0.0% 30/154 19.5% 25211735 NA +3049 chr4 + 190214555 53670903 53670902 53670945 43 TCTTTCTTTCTCTCTCTCTCTTTCTTCCTCTTCTTCTTTTTTC chr4 - 94230402 44996840 44996839 44996882 49233521 49233520 49233563 43 TCTCTCTTTCTCTCTCTCTCTTTCCTCCTCAGCTGTTTTTTTC ...:....................:.....xx..x:....... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 8674063 NA +3080 chr4 + 190214555 53670904 53670903 53670975 72 CTTTCTTTCTCTCTCTCTCTTTCTTCCTCTTCTTCTTTTTTCCTTTTTTTTTCCCTTTTTCTGTTTCTCTGG chr4 - 94230402 44322037 44322036 44322108 49908295 49908294 49908366 72 CCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTTACATTTAGCTGG .:...x..:.x:...x:.:x..:x....:.........x..:....:.....:..::...x::...xx.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 9348867 NA +3041 chr4 + 190214555 53783596 53783595 53783642 47 ATTGTTTCTTTATCTCTCTCTCTCTCTTTTTTTTTTCTTTTTGACAG chr4 - 94230402 50117646 50117645 50117692 44112711 44112710 44112757 47 ACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAG .:...x.x..xx.............:..........:......:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 3665950 NA +3228 chr4 + 190214555 53784556 53784555 53784743 188 TGCAGCCTCAACCTCCTGGGCCCAAGCAGTTCTCCTGTCTCAGCCTTCCATGTAGCTGGGATCACAGACATTGGCCACCATGCCTGGCTACTTTTATTTTTATTTTCTGTAGAGATGAAGTTTCACCATCTTCCCCAGGCTGGTCTTGAATTCCTGGGCTCAAGTGATCCTTCTGCCTTCGCCTCCCA chr4 - 94230402 18197127 18197126 18197282 76033121 76033120 76033276 156 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG------------TATCATCCTTTC--------ATGACATTACA-TACTTTCCCAAACCAGGTC-------CCTAATCTTTACTG--CCTTCTGCCCTCCTCTTTCA .:.....:x..x..:.....::....::x...x.xx.x.........:..x........:.::..--..:.xx:....::..------------...:x.:x...:--------....x:..x..-:.::.....x.:x.x....-------...::x..:x.x..--.........:..x:..::.. 65M2D15M12D12M8D11M1D19M7D14M2D20M 105/156 67.3% 156/94230402 0.0% 32/156 20.5% 35587429 NA +13158 chr4 + 190214555 53801285 53801284 53801769 485 AATACATCT--CAGGAGAAGGTCGAGCTTTTCCTACTGAACCGAGTGACATTTAAAAGGGGGCATTTGGATGGAACATGGT---AGAAAGTAGCAAACTGCTTTAGGGAAGAGGCAGGGTTATCTTGGTTTTATAGGTCTTGC-AAATATTTATTCAAGGTGCTAAAAAGTAGCGTCTCTCCTTCTTAAAATTATTGGCCAAAGTGGTCTTATGCCATTAGTTTGTAAGTAAATATTGCTGCAACATTCTAAACAGATTTATTAGGCCTGTCACCAGCAGCCAAATATTTATGTAAGCTCCGTGGGTTGAAAAGGTAGTTTAAGGAGATTGTTTTAACCACAGCTT--TGTAAATGTTTAAGGTAACATCCTGTCTCTTTGAAACCATCCCACCTAGCC-ATATCGTCATATTTATAATAAAAGGACAACATGTTCAAAGTGATGCATTATTTCCTGCTGTCCAAAGTTAGGCTTCTGTCCTTTTATCACAGCT chr4 - 94230402 26766347 26766346 26766823 67463580 67463579 67464056 477 AATACAACTTGCAGAGAAAAATCAAGCTCTT--TGCAAAA--GAACAACAAAAATGAGAGGGCCTTTGG--GGAAAAGGTTTTAAGGAAGCAGTAAATATATCTAAGAGAGAGGCAAGGTTATCTGGGATTTATAAATTTTTCCAAATATTTATGCCAGGTGCTAAAAAGCAGCATTGCCCTTGCTTAAAACTATTTGGACAAGCAGGCTTACAGCTTTCCTCTCTGTGTAAACAGTATAGCAACATTCTAAACAGA-TTAATAGTGGTATCTGTTCAAGTCAAATATTTATTTAAGCTAGATGAGTGGAAAAGGTAGTCTAAGGAGAATATTCTAACCACAAATTACAGGAGGTACTGAAG----TATCCTGCCTGCAAGCAAACATCTCACCTTGATGAAATGATGATGTTTAAAATGAAAAGACTTCATGACCTAAGC----TGTTGCTTCCGGTTACCTAAGA--AGGATGTTCTCTCTCTTTCAGAGCT ......x..--...:::..::..:....:..--.:.x:..--..:::...xxx.x:..:....x.....--....x.x.x.---..:...:..:...:xxx.:..:.::.......:........x..x......::.:..x.-..........x.x.............:...:.:x.:.:.x.......:....x.xxx...::.x....::x.x..xx.:.x.:x.....:.x.::x.................-...x...xxx.:..xx:xxx..:...........x......xx:..:..x...........:........x.:..:........:x..--x.x.::.::.x...----:......:..x:xx.x..x....:.....x.x:-.x..x:.x..:....x...:...:...xx....x:.x...:----::..::....x.:.::.:..::--...x.x:.x..::.:.x...x.... 9M2I20M2D7M2D27M2D10M3I59M1I113M1D88M2I14M4D33M1I41M4D22M2D25M 317/468 67.7% 477/94230402 0.0% 26/468 5.6% 27034938 NA +7218 chr4 + 190214555 53849016 53849015 53849338 323 AAAGCATGGCTCTGCCTTCTCTCTTGAGAGCTGGCTTCGAGAATGAGCTATGTGCTGGGTAGGACATAAGTGGAGCCCTTTCTCACGGGGAAGGTTGGCCACTACTGTGGCGCCTTCTT-GTGTGTTCCCTCCAGCACTGCTAGACAAGCCCGTCCTCGAAACAAATCTGGGGAAATTTATGCTGACACTTGGTTCCACATCTGGAAATGCTGAGGGTCAGTTATGATTCTTAGCATTGTGTTCATTCTCTTCTTAAGCAAAACTTCAACTTACCTTGCAGGCCAGTGCTCTTTTTTCCAGACACCCAAGGCATTCCAGCAATC chr4 - 94230402 26787037 26787036 26787349 67443054 67443053 67443366 313 AAAATGTGGTTTTGCTTTGTATACTTAACGCTAGTTTCTATG-TAAGATACACACTGGACAAATCTCAAGTAAAGGTCTCTTCCA-GCAGAAGGTCAGACATT----TGGTGCCTTTTCCATATGTTCTGAACCGCGCTGCTGGCTGACTGTGTGCTGAAAAGGAGCTTTGAGAAAG--AAGTCGAGTCCTATTCACACATCTGGAAATGCTGATGGTCAGTTAGATTTTAAAGCACTATGGTCATTCTCCAC---AGCAAAGATCCTACGTACCTTCAAGGCAAAAGCAGTGATTGCCGAATGCTCATGACATTCCAGTGGTC ...:::...:.:...:..x.x.x:.x.:x...:.:...x.x:-.:..x..::::....::.::x.x:....::..x:..:.::..-.x:......::.x..:.----...:.....:.:-:.:.....:xxx.x..:.....:.x::.x:x:..x..x:...x:.:::.x.:....x--.x.::..xx.:.:x.:x..................x.........x:x..:xx....:.:..x........:x.---......:x.:.x..x......xx....x.:x..xx.xx..x..::.::.:..x.:........:::.. 42M1D42M1D17M4D12M1I57M2D74M3D68M 191/312 61.2% 313/94230402 0.0% 12/312 3.8% 27061979 NA +3102 chr4 + 190214555 53850297 53850296 53850332 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -27778767 -66451635 +3475 chr4 + 190214555 53850297 53850296 53850336 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................:... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 34867982 NA +3216 chr4 + 190214555 53850299 53850298 53850427 129 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAAGAGAGAGACAG-----AGAGAGAGAAAG-----AGAGAGAAAGAGAGAGCGAGAGCACGCACACACGTGAGAGAGAGGTGGCGAGGGTTACTCTTAATCTGG chr4 - 94230402 81629064 81629063 81629189 12601214 12601213 12601339 126 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAG--AGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATAC----------TGGAGAGTGGTGGGGAGGATT-TTCTAAAACTGG ..........:.......................--..x.xxxx....-----.:.x.x.:.x:.-----.:.......xxx....x..x.::..----------x:.....x.....x....:..-:...x..x.... 34M2D12M5I12M5I25M10D21M1D12M 88/116 75.9% 126/94230402 0.0% 23/116 19.8% -27778765 -66451637 +3436 chr4 + 190214555 53850299 53850298 53850338 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...................................:::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 34867984 NA +3222 chr4 + 190214555 53850301 53850300 53850340 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x................:..::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 34867986 NA +15821 chr4 + 190214555 53863773 53863772 53864146 374 ACCATCCTTCATTTCTGATTTCTCTCCTCCAAGGAGATAAGGACGAGCCAGGGCCTCTCGGTGTGTTTTACATCAAAGGCCACTGAAGGGTCTTGACAGGCTGGATGTCAGTGCTGTAAATAAACCATTAATCACTCTGCCATTTCATGG-ACACACTCTTCCCAGAGGGCATGAACTTTCTCCAGGGCACTAATATAAACCACATCTTTCCTGAGCCAATGGGGGAGGCAGAGTGGGGCGTCAGAGCTCAGAGAGCAGGCTCCCTCATTGACACAA-------CCATTACTCTCCTCTTAAAACCACAGGTC------------CCTGTAGCTTGGAAATGGTTAATGAAAAGAGATACAGTTGAAACGGATTCAACAAATGAAGTCACAGCT chr4 - 94230402 26794581 26794580 26794963 67435440 67435439 67435822 383 ACCATCCCTCACTTCTGATTTCT----TCTGAGCAGATAAGAATGACCTAGGGCCTCTGAGTATGTTTTACATCAAAGGCTGATGAAGAGTCCTGACAGCCTTGATGTCAGTGCTGTAAATAAACCATTAATCACACTGCCATTGCAGGGAACAGTCTTTTCCCAGAGGGCATGAACCTTCTTCAGGTCACTAATATAAACCACATCTTCTCTAATCCAGTGGGGTATG------GTAATGGCAGGGCTTTCAAGGTGGGCTGACTCCTTGTCAGGGGGATACTCTATTACTC-CTATTTGAACGCACAGGTCATTGTTACGGTTCCCATGGATTACAAATGGTCAATTAGCGAGGAAGAAACTAAGGTGAACTATATAAAGTGTATCACAGTT .......:...:...........----..::..x.......:.:..x.:.........x:..:.................::x.....:...:......x..x................................x........x..x..-...xx..:..................:....:....x.....................::..:.x...:.....x.x.------.x:::.x...:...:xx.::.::....xx...x...x..x::-------.:.......-.:x:..:..xx........------------..::.:.x..:x.......:...x.:x:::..x:x.::.:.:::.:.:.xx.:...xx:x:......:. 23M4D123M1I78M6D42M7I9M1D19M12I69M 268/363 73.8% 383/94230402 0.0% 31/363 8.5% 27069192 NA +3630 chr4 + 190214555 53867287 53867286 53867367 81 GAAACAAAGAAAGAAAGAAAGAGAGAGAGAAAGAGAGAGAG-AGAGAAAGAGAGGAAGAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858295 36858294 36858376 57372027 57372026 57372108 82 GAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......:xx..x.....x...:............:.:.x..-..xx....:...:.:..:..x..::.x..::.......:. 41M1I40M 59/81 72.8% 82/94230402 0.0% 1/81 1.2% 17008992 NA +3359 chr4 + 190214555 53867297 53867296 53867389 93 AAGAAAGAAAGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGGAAGAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44400475 44400474 44400568 49829835 49829834 49829928 94 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ..:...x....x.x.x.x.x:..:...:.:.:.:..:...::.:.........:...........-.::x:...:x...xx.x.:.:..x.:.. 65M1I28M 62/93 66.7% 94/94230402 0.0% 1/93 1.1% 9466822 NA +6776 chr4 + 190214555 53875672 53875671 53875860 189 ATTAGCTAACTTCACTCACTGTCTCCTATGTTTATGCTTCCCTGCCCAATTCCAAGTGACAAATAGCTATCCAAAGCCATGGGCTTGACCCCAGATGACCTCATGCTTGAGTGCCTTCATCCCAGTGCATGGGTCAGCACTCAGA-------GACTGCCATAG-CCCTTGCTCAGCTGGTAATTGATTTCCATGTGA chr4 - 94230402 26800968 26800967 26801157 67429246 67429245 67429435 190 ATCTGTTAACCTCCTCCACTGTCTCAGATGTTTAGAGTTCCCTTCCCTATAGCGAATGAAAAATGGAAAGC-ACAGCCATGG-CGTGACCTGGACTGACCTAACGCTTGATTGCCTCCATCCCTGTTCATGGGTGAG-----AGATGGTGTTGACTTCCACAGTCCCCTGCACTGCTTGTAATTAATTTCCATTTGA ..:x.:....:..x::.........xx.......x:x......x...x..xx.:.:...x....:.xx.x.-.x........-.x.....:x::x......x.:......x.....:......x..x.......x..-----...-------....x...:..-...:...x.x...x......:........x... 71M1D10M1D54M5D3M7I11M1I33M 137/182 75.3% 190/94230402 0.0% 15/182 8.2% 27074704 NA +3295 chr4 + 190214555 53876408 53876407 53876533 126 TCCTTCATTTGTGAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAGGAAGACACAAAAGAAAGAAAGAGAGAGGAAGAAAGGAGAGAGGGACAGAA-----GGAATAAAAAGAGAGAAAAAGAGGTTAGAC chr4 - 94230402 90750608 90750607 90750733 3479670 3479669 3479795 126 TCCTTCAC-----AGCAAAAAAAAGAAGAAGAAGAAGAAAATAGAGAGACTTGCAAAATGTTGAGAGATTGAAGAAGAATTTAACATGGGATTAAATATTGGGGGGAAAAATAGGAAAAAGAAAAGCAGGC .......:-----.:x........:..............:.x....::.xx::.....x:xx..:...xx..:......xxx.:x:x....:x:..-----..::x.....x..::....::.::x:..:. 8M5D83M5I30M 78/121 64.5% 126/94230402 0.0% 10/121 8.3% -36874200 -57356202 +3102 chr4 + 190214555 53885147 53885146 53885223 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x..:.xx..:xx.x..:..xxx.x..x....x..x..x......... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -35193624 -59036778 +3091 chr4 + 190214555 53885150 53885149 53885226 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x..:.xx..:xx.x..:..xxx.x..x....x..x..x......... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% -35193621 -59036781 +3222 chr4 + 190214555 53885153 53885152 53885229 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x..:.xx..:xx.x.....xxx.x..x....x..x..x......... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% -35193618 -59036784 +3211 chr4 + 190214555 53885156 53885155 53885232 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x..:.xx..:xx.x.....xxx.x..x....x..x..x......... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% -35193615 -59036787 +10599 chr4 + 190214555 53889272 53889271 53889630 359 AAAGTCCCTTATGGGCTCTAACTCTTTCCATTA---------TTCAAACACAAACGATGTTTAAATAAGCATTGTTATTGTATATTCGGATTTCAAAGTGGGCTTTTCCCCATCCAGATGTTATTGCTTACATGACTGTCTACATCCAGAGAAACACTGCTGAGGACGCC--GCCTCTGAGACACTGTT-CTATAACTCACCACTTGGCTGTTCTCTTTCCAAAAAAAAAGACTGTTTTTGATGTAAAACACTAGTTGATTTCAGAAT----GTGGCTTTCTCCCTGCTAAACTTTCTCCTCACTTACCCTACCCAACAAGAAGTCTCTCTCCTAATGGAATTGCTGGAACCACTTACCCTCCATTAAGACGCTA chr4 - 94230402 26802658 26802657 26803005 67427398 67427397 67427745 348 AAAAGCTCCCAGAGACTCTTGCTCTTGGTGTTGGGATCTCCTTTCTAACACAGATATTGTTTAAATACGCAATGTTATTTTAC-TTTAGTTCTCAAATGAGTCTTTATTTCATCCAGATGTTACTGCTCATATCCCTGTCTTCGTTTAGAGCAACACTTTGTAGAATACCTAATCTTTAAGTCACTTTTACTTTAATTCACCACTATATTTTT-------------AAACGACTGTGTTTGACATAAACCACTAGCTGGTTTCACAACTGCAGCGTCTCCACCTTTGGCAAACTCTTCACTTATTTATTCCCTCC-------------TCTTTTAATGGAGTTGCTGGAACCACTTAAAATCCATTAATACACTA ...:x.:.::.x:.:....x:.....xx::..:---------...x......:.::x..........x...x.......x..:-..::.x.:.....xx:.x....x:::.............:....:.:..xx......x.:.::....x......x:xx..:.::..--::..:.:..x....x..-..x...:........xx::.x..-------------...x......x.....::....x......:..:.....x..:----.:.x..::x:.::..x:.....:.::x..:.:...::.:x:..-------------...::.......:................xxx........x..:... 33M9I41M1D86M2I17M1I23M13D42M4I43M13D47M 228/332 68.7% 348/94230402 0.0% 43/332 13.0% 27086614 NA +4497 chr4 + 190214555 53901504 53901503 53901714 211 AGGAGGAGAAGGAAGGAAGGAAGGGAGAAAAGGAAGGAGGGAGTAAGAGGGAAGGAAGGAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAAGGGAAGGGGAGGGGAGAAA---GGGAAGGGAAGGGAATGGGAGGGGAGAAAGGGAAGGGAAGGAAATGGGAGGGGAGGAGAGAAGAAGGGAGGGTAGGGAAGACAATGGCAGAGA chr4 - 94230402 26501920 26501919 26502126 67728277 67728276 67728483 207 AGGAGGAGGTGGATGAAAAAAAAGGAGCCAAGGGAGGACTGGATCCACGTGGGTGATGGAGAGGATGAGGAAAGAACTGGGGCAG---AAGATGGGGAAAGTAGTAGGAGTAGTAACAGATGGGTAGGGAGAAATATGAGAAGGGTGTAGGGGAAAAAAAAGAGGCATAA--GCATGAAAGAACAAAGAAGCCAAAGGAAGACA--GGCAGAAA ........:x...x.:..::..:....xx....:....xx.::.xx:x.x.::x..x...:::::x....:.:.:.xx.:..x..---::..x......:.x.:x:....x:.x:.x.---...x.....::::x...:..:...x.x.:.....:::..:..::::x:.--.x.x..:....x..:.:..xxx.:........--......:. 85M3D30M3I49M2D32M2D8M 123/204 60.3% 207/94230402 0.0% 10/204 4.9% 27399584 NA +3359 chr4 + 190214555 53901517 53901516 53901665 149 AGGAAGGAAGGGAGAAAAGGAAGGAGGGAGTAAGAGGGAAGGAAGGAAGAAGGGAGGGAGGGAGGGAGGGAGGGA----GGGAGGGGGAAGGGAAGGGGAGGGGAGAAAGGGAAGGGAAGGGAATGGGAGGGGAGAAAGGGAAGGGAAGGAAA chr4 - 94230402 90814934 90814933 90815086 3415317 3415316 3415469 153 AGCAAAGGGTGGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAA ..x..:.::x..:..:.::..::....x:.x.x.:.xx.x..:..::...x:::..:...:x.::..::....:.----xx:..::....x:.:.:xx..:x:.::.x:x.:....:.x:...x.:...:x.:.:....::x...:....... 75M4I74M 82/149 55.0% 153/94230402 0.0% 4/149 2.7% -36913417 -57316985 +3056 chr4 + 190214555 53901584 53901583 53901631 48 GGGAGGGAGGGAGGGGGAAGGGAAGGGGAGGGGAGAAAGGGAAGGGAA chr4 - 94230402 35162195 35162194 35162242 59068161 59068160 59068208 48 GGGATGCAGAGGGGAGAAAGGGAGGGAGAGGGGAGAAAAGGAAGAAAA ....x.x..:.:..:.:......:..:...........:.....::.. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 18739389 NA +4296 chr4 + 190214555 53903348 53903347 53903525 178 AAGGAAGGAAGAAAGGAAGGAGGGAGGGAAGGAGGGGGGG------------GAAGGGAGGGGAGGGGAGAGAGAGAGAAAGAGAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAGAAAG----AAAGGAAAGAAAGAGGG chr4 - 94230402 21758891 21758890 21759084 72471319 72471318 72471512 194 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAACGTTTCAGTGAAAAGTAATAGGG ..:.:..xx.......:...::.x.:..:.:...:....:------------.x.x.x.::x:..x:x.:.:.x.x:x..x..x.:.....x:x.:xx.......:.......:....:..:.:...::x..:x......xxx....::...xxx:x....:..:...x..x.----.:x.:....x..x.... 40M12I121M4I17M 111/178 62.4% 194/94230402 0.0% 16/178 9.0% 32144457 NA +3222 chr4 + 190214555 53903372 53903371 53903429 58 AGGGAAGGA---GGGGGGGGAAGGGAGGGGAGGGGAGAGAGAGAGAAAGAGAGAAAGAAAG chr4 - 94230402 87012026 87012025 87012086 7218317 7218316 7218377 61 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG .......::---......:.:....:.........:..:..::x:.....:.:...:.... 9M3I49M 44/58 75.9% 61/94230402 0.0% 3/58 5.2% -33108654 -61121748 +3711 chr4 + 190214555 53903375 53903374 53903534 160 GAAGGAGGGGGGGGAAGGGAGGGGAGGGGAGAGAGAGAGAAAGAGAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAAGAGAAAG-AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGAAAGGAAAGAAAGAGGGAGAAAGAAA chr4 - 94230402 21758901 21758900 21759061 72471342 72471341 72471502 161 GAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ...:.:.:...:.x......:.:.......xxxx:.x::x...x:x.x..:x...x.x...:.x.x.x..x:.x::.....x:x..-x......:...::..:.:.:....:.:...:.x.:.x......xxx....:::..xxx:x:..:..:...:x.. 86M1I74M 95/160 59.4% 161/94230402 0.0% 1/160 0.6% 32144474 NA +3106 chr4 + 190214555 53903382 53903381 53903437 56 GGGGGGGAAGGGAGGGGAGGGGAGAGAGAGAGAAAGAGAGAAAGAAAGAAAAAAGA chr4 - 94230402 67346022 67346021 67346077 26884326 26884325 26884381 56 GGGGGGGTGTGGGGGGGGGGGGAAGGAGAGAGAGAGAGCAAAAGCAAAAACACAGA .......x:x..:....:.....::........:....x:....x..:..x.x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -13442640 -80787762 +3009 chr4 + 190214555 53903456 53903455 53903509 54 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGA chr4 - 94230402 27809323 27809322 27809376 66421027 66421026 66421080 54 GAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAA ..:.:.::.:....x:....x...::......x.....:........:....:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 26094133 NA +3017 chr4 + 190214555 53903463 53903462 53903520 58 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAGAAAGAAAGGAAAGAAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA .:..:x.:.:.......:...:..........xx:..:x....:..::...:...... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 46192114 NA +5455 chr4 + 190214555 53904753 53904752 53905002 250 CAATGCTTATGCCTGGAACGAATGAGCCTTTATTGTGGACAAGC--TCTGTGAGTGAAG--GCCCTCCTTGAGTCTGGTGATAAAAATAGGCTATGGCCAGGCAGGATACAGAAGAGCATGACCAATCACCAAATAAAGGTTTATTGGCTTATACATTTTATTGTACCGTGACATCCCTCCTTTCAGCTTTAGATGTCAGCAGCTGGTGGCAAGCTTAATGACTGATGCATAGGGGAACAGC--CATGGACACCAC chr4 - 94230402 26812166 26812165 26812415 67417988 67417987 67418237 250 CAGTGCACCGGCATGCAACTAAGACGGCGTTGTTGTGGAAATGCATGCAGGAAATGGAACAGCTCTC----AGTCTGAAGGAGAAAATGGCCCATTTTTAA-CAGGATGCAGAAAACCATGACAAATCATTAAGTGTGGTTTTATGGGCTTGTGGTCTTTATTGTGCCATCTTTTCTAAGCTCCTGTCTTCAGATGTTGGCAGCAGGTGACAAGTTTGTTAGGCAGT-TATAAAGAGACAATTGCATGGCTACCAC ..:...x:xx..x..x...x..x:x.x.x..:.......x.x..--x.x.x:.:..:.:--..:...----......:x.:x:.....:.x.:..xx::.:-......:.....:.x......x.....::..:.:x:.x.....x.....:.:xx:........:..:.xx:x..:xxx..::::x...:......::.....x....:....:..:x.::x:::.-:...::.::...::--.....x:..... 44M2I13M2I6M4D30M1D125M1D14M2I12M 152/244 62.3% 250/94230402 0.0% 12/244 4.9% 27092587 NA +5373 chr4 + 190214555 53905523 53905522 53905801 279 AAATGCTCTGAAAAATAAACTGCTAACACTCTGGTAAAGAGCCTTCTGCAGTTAG-----------------CAAAAT-----AGTCACCAGGACCTTCTTTTTAAAT-GACTACACTTTCCACACTTTTTCTATCTTTGTTGAC-TTAAGTTCAAAGTCAAACTAGAAAATCTGTTTTGTCAGATGGAAGTTCGCTACTCACCGTTCTGAGAGGCTCCATGCACAGCTCATTGTG-TTACCCCACTGCACAGAATCTACTCTTCTAGAGAGACACTGGCAGCTTTGTGCTTTGCATTTATTTA chr4 - 94230402 26812999 26812998 26813276 67417127 67417126 67417404 278 AAACACTCTGAAAACTGTGC----AGTGCTCTTGGAAAGCTCCTG-TGCCGTTAGATGTATGTCGCACACAGCAAAGTCTGTCAGGCACTGGGGCCCTC-----AAATAGAGCCCCTTTCCCACACTTTTCC---ATCTGTTGACACTAAGTTCAAAGCCAGGCTGGAAAACCTGTTTTGTCAGATG-------GCTGCTAGCTGTTTAGAGAGGTT--ATTGGTAAC-CAGTGTGCTCACCCCAC-GCACAGCAGCACCTCTGC-AAAGAGACAGC-ACAGCCTCCTGTTCCTAATTTACATA ...::.........x.:x:.----.:::....x.x....xx...x-...x.....-----------------....:.-----..x...::..:..:..-----....-..x:x.x:..:..........:.---x.:.......-:...........:..::..:.....:...............-------...:..x:.:...:x......:.--..xx::.:.-..x....-.:.......-......x.x.xx....x.-.:.......x:-:....:.:x..:.::xx.....:x.. 20M4D21M1D9M17I6M5I16M5D4M1I23M3D10M1I41M7D23M2D9M1D7M1I9M1D18M1D11M1D26M 184/253 72.7% 278/94230402 0.0% 51/253 20.2% 27092524 NA +3672 chr4 + 190214555 53925175 53925174 53925245 71 CTTCACTTGCTGTGTGGCCTTTGGCAAGTTACTTAACCTCTCTGTGCCTCCATTTCTTCATCTGTAAAATG chr4 - 94230402 11947206 11947205 11947276 82283127 82283126 82283197 71 CCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG .:.....x:.......:....x..:x...:......:..x:.....:.:.x:....::...x.:.:..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 41977969 NA +3844 chr4 + 190214555 53925179 53925178 53925242 64 ACTTGCTGTGTGGCCTTTGGCAAGTTACTTAACCTCTCTGTGCCTCCATTTCTTCATCTGTAAA chr4 - 94230402 60684686 60684685 60684749 33545654 33545653 33545717 64 ACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAA ....x.....::.:..xx.......x.:x.x.............:.......:..x........ 64M 51/64 79.7% 64/94230402 0.0% 0/64 0.0% -6759507 -87470895 +3112 chr4 + 190214555 53928174 53928173 53928237 64 TAGCTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGTGTCCTCTCTGTC chr4 - 94230402 80433411 80433410 80433474 13796929 13796928 13796992 64 TAACTTGTGTACTTGTTTTTGTATTTTGGTCTCTTTTTTTTTTTTGGTTGGTGTGCCCTCTGTC ..:.....x.x:..x.....x.x....xx.:.:...........x:.x......x.:....... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% -26505237 -67725165 +3026 chr4 + 190214555 53929545 53929544 53929634 90 TTCTTAGTGATTTTTTTCTTCTCTCTTTTTTCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAAGGTCTTGCTCTGTCACCCA chr4 - 94230402 15259909 15259908 15259998 78970405 78970404 78970494 90 TTCCTGATAATTTTTCTCTTTCCATTTTGTTTTCTGTTTAGCTTCTGCTTGTTTTTTTCTTTTTTAGACAAAAATGAACTCTGGCAATCA ...:.::.:......:....::.x:...x..:.::x.:.xx:..:.x:..x.......:.....x......::x:xx:.....x..x:.. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% 38669636 NA +3140 chr4 + 190214555 53929569 53929568 53929628 60 CTTTTTTCTTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAAGGTCTTGCTCTGT chr4 - 94230402 76182411 76182410 76182470 18047933 18047932 18047992 60 CTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGT .......:x..x...::xx........x............:...x..:.xx...:..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -22252842 -71977560 +3732 chr4 + 190214555 53937178 53937177 53937257 80 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGTCTACTGAGTAACTGGGATTACAGGTGCACCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGT ..:..:..:xx:x..:.............x...x.xx.x.....:..x:::....:....:.:....x.........::. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 35740052 NA +19281 chr4 + 190214555 53943780 53943779 53944119 340 TTCTAGATGCCATCAACCAAAGGGTGTTTAGAAATGTGTTAATAATTCCCAGGAGAAATTGGCCAGGATTACCTAGTCATGACTAATGAAGCTGTCATCTGCCTTTCCTTCCTGCTGTTTAATAATGCCTTCTAAAGAGTGCTTTATGAAGATGGATAGTATTATAATGCTGCACTCAAGAAACTGGCACAATGTCAATGAAAACAGAGGCCAGCTTATTTTGCATGCCACTCTATTTTTCATTACGCTCCACAATAACTTGTTATTAAATGAAAATGAATTTGCCATTAGGGACTAGGTACTATTTAATAACT-GTTCAGCAATGTTTCATGATTTAATT chr4 - 94230402 26824210 26824209 26824549 67405854 67405853 67406193 340 TTTTGGATGCCATCAACCCAAGGATGTTTTGGAATGTGCTAATAATCCCCAGCAGAAAGCGGCCAGGTTTGGCTCGTAGTGACTAATGAAGCTGTCATACACCATTCCTTCCTGCTGTTTAATAATACTTTCGAAAGAGCTCTTTATGGAGATGAATAGCATAGTAGTACTGCAGCTGAGGAACTGGCGTGCTGTCAAAGAAAACAGAGGCTAGTTTACTATGCATGGCACTGTATTTTTCATTATACTTCACAAAGCCTTGTTA-TAACTGAAAATGAATTCATCACTGGGGGACAGATATTATTTAATAAATAGTTCAATACTGTTTCGAGGCTTTATT ..:.:.............x....:.....x.:......:.......:.....x.....x:.......x..:x..x..x:...................x::..x......................:.:...x......:x.......:.....:....:..x:..:.:.....x:::..:.......:::x......x............:..:...:.x......x....x............::..:.....x:x.......-...x............:::..:.:...:x:..:..:..........x.-.....::.x......:x.::..x... 265M1D48M1I26M 264/339 77.9% 340/94230402 0.0% 2/339 0.6% 27119570 NA +17459 chr4 + 190214555 53963831 53963830 53964399 569 GTTACTTAAAGCATTTGAGAAGAAAACTGCAGGAAGTAGTAGATTCGGGACATAAAGGACATCATTTGCCTGCCTTATTATCTCATTTTTCAGTGAAGCTGACAGGACAGCTGCCTGTTATTACAGGGCACACCAGGAAATGTTTAGCTGCCAAACAGAAAAGAACGAGTGAGGGATTAACAGCCCTGTTCATGCCACACAAATAGAATTCTTGCACCTGGTAGTCACGCAGTTAGATTTATTAT-TTCATAGGGTATGTTACTTAAATCCCATTTACAAAGAAACAAAAACAACCCAAAAAGGCACCTTAATGATACTGTAATTATGAGAAGTATTAGTAACCATTTTGCAGTTTTTAGTCTAGATTAAATTAATTGGTGGTGGTTTTCATTTAATCACACTAATCTTTTATTTGGTTTCTATAA-TGTCGCAAACTTACTATTCTATGTTGCAAATCTAAAGCGTTCTTAAA-AATGAAAGATCGATAACAGTTTAATCCTCCACAAGGCTGCTCTCATTAATGATGTTGTGTAACAATAGAGAGCTCTTTGCAAGGTGGCAGATCACCT chr4 - 94230402 26830093 26830092 26830615 67399788 67399787 67400310 523 GTTACTTGAGTAAGCTGGGAG---ATCTGTAAGAAGCAT---GTCTACAAGAGGACAGACACTATCTGCCG-------TATCTCATTTTTCACTGGAACTGAGGGGACAGCTGCCTGTTATTTCCTG-CACCCCAGGAAATGCCTGGCTGCCAAAGAGCTCAGAGCCAGCAAGGGATTAGCA---------------CACAAACAGAATCCATGCACCTGGTAGTCACGCAGTTAGATATGCCATCTTCATGGGATACAATACTTCAATCTCATTTACAAAGAAACAAAAACAAACAGAAATGA---CTTCATGTTGCCATAATTATGATAAGTATTGG-AATAATTTTGCAGTTTT-----AATACTACATTAAGTGGCAGTTGTTTTCCTTTAATTGCAGTAATTTGTTGAAAGACTTATATAACTGTCATAGATGTAACACTCCTGGTTGCATGCATAAACTGTTCCTAAATAATGCAGGATAAATATCATTTTAAGTGACCAGAGCCCTGACAGCTCTACTGATTTCATGT-----------GCTCTGTGCAGTATATGAAATTAACT .......:.:xx.x:..:..:---.x...:.:....:.x---:.:::x:.x.x:.x:....::..:....x-------..............x..:.:....x:..................x.xx.-...x..........::.:.........x..xxx...:.x..::........:..---------------......:.....:.x..........................x.:::..-.....:..:..::x.....x....:.......................x.x:...x.:---...x...x.:.::.........x.......:.-..:x.............-----x.x.:..x.....x...::..x......x......::..x....:.x..:xxx.::..x.....-....::.:.:x..x:.:..:xx......x::x....x:....:....-....x.:...x:...x..x.....x:xx...x.:xx...x:xx.x:..x....x.::...-----------.....x....:x:.:xx.:..:.x.. 21M3D15M3D29M7D49M1D54M15D48M1I58M3D32M1D17M5D64M1I47M1I60M11D26M 370/520 71.2% 523/94230402 0.0% 52/520 10.0% 27133738 NA +3138 chr4 + 190214555 53986471 53986470 53986549 79 TTCTTTTTTGTTGTTTTTTGATTTTTTTGTTTTGTTTTGTTTTACAGCCAGAGGTCTTTTATTTTATTTTATTTTATTT chr4 - 94230402 11044434 11044433 11044512 83185891 83185890 83185969 79 TTCTTTTTTGTTGTTTTTTGGGTTTTTTTTACTGAGTTAATTAGAATAAAGAGGCTTTCCTTTTTTTTTTTTTTTTTTT ....................:x......x.x:..xx..:x..x:x.xxx.....::..::x....x....x....x... 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 42942037 NA +6246 chr4 + 190214555 53997821 53997820 53998074 254 TCCTACCAGCACCAAAGAAAATACATTTGACAACCACA---------ATTGGATCGGTGGCAGTA---------AAACATAAAATAATTTTAATTTAGAAAACAACACACCCCTTGCACTTTTTGTAACGAAATTAAGTTTTTAGG-TTCCAAG------CTATTCATCATGAAGAGAATGTGTTTAATCTGATGTGAAGTTGGCTACCCAACAGTCTAGTCAGGCTGTAGAATGTTTAACTCGGGGTCTGGTAGGCTGCCAGCCATTCTAAATGTTTT chr4 - 94230402 26848247 26848246 26848506 67381897 67381896 67382156 260 TCTTAGTAGCAACGAAGTAAA---ATT---CAACCACACCAATATAAATAACATCGATACCAGTGTTGGGAAGTAAATATAAAAACATTTTAAAATAGAACTTAGAAACCATATTGTATTGTTTAGTATGAAAATAA-----TAGGCTTTCAAGGCAGTACTATT--------AGAGAATGTATTTAATCCAGAGCAGAATTGGCTATGAAACCGTCCACTCTACCATGGGAATGCTTAGCTCAGTATCTGGTAGGTTGCCAGCCATTTAAAATGTTTT ..:..x:....x.:...x...---...---........---------..x:x....:.:x....:---------...:......xx.......xx.....xx:.:x.xx.x:x...:.:.x...:xx.:....x...-----....-..:....------.....--------.........:.......:::x.:::.:.......:xx...x...:.x..x:x.xxx:.....:...:...:.x:.........:...........:x......... 21M3D3M3D8M9I18M9I63M5D4M1I7M6I5M8D106M 168/235 71.5% 260/94230402 0.0% 44/235 18.7% 27149574 NA +44397 chr4 + 190214555 54001656 54001655 54002233 578 AGTGGGTGGTCTTTGCAGAGGGAGGTGCTCACTC------ACTCTACCTCTGGCCAGAGCCAGTTCCTGCAGCTGGACCAAGGGCAGCCCACAGACTGCACTCGGCACATTTCTTCATTTCTCACTTGAGTGCCCTTCTTTAGTCTCCTTTCAACTGCCCACTTTATATCGGCTTCATTACACCACCGCTCCATTTGTAATGTAAATTGGGAAACTCGGGGAAGTTTTTCTTTTGGCCTTGTCTACGAAAGAATACCGAGAGGTATTCAAAACGTATTAACACAAATCAATGGCAGCAATAAAAGCAAAATCTCCTTAGCAACATAATCTTGATTGCAAAAGGAGAACTGAGAGCATTTAGCAGAACAGTGGCCCACATGGAATACGCATTTGTCTGGAAGAATCCAGCACAAAGCCTAAAAGAGAGATTTTGAAGAAATCCAAAATTAACTCACAGGGAACAGTTACTCTTTTTTTCAAAAGTACACAATTGGCTACATTAAATCTATCGTGTGCTTTT-GGCTCAGCAACATTGTATCACACCGCTTTGCAAACTGAAATTACAACACCCTGCATGCTTCACA chr4 - 94230402 26850222 26850221 26850802 67379601 67379600 67380181 581 AGTGGGTGGTCCGCGGGGACG-AGGCACGGGCTCCGCGCTGCCCGGCCGCTGGCCTGAGCCAGCTCCTGCAGCTGGGCCGAAGGCGGCC-GCAGACCGCTCTCGGCACATTTCTTCATTTCTCACTTGAGTGCCCTTCTTTAGTTCCCTTTCAACTGCCCACTTTATATCGGCTTCATTACACCACCGCTCCATTTGTAATGTAAATCGGGAAACTCAGGGAAGTTTTTCTTTTGGCCTTGTCTACGGAAGAATACCGAGAGGTATTCAAAACGTATTAACACAAATCAATGGCACCAATAAAAGCAAAATCTCCTTAGCAACATAATCTTGATTGCAAAAGGAGAACTGAGAGCATTTAGCAGAACAGTGGCCCACATGGAATACGCATTTGTCTCGAAGAATGCGGCACAAAGCCTAAAAGAGAGATGCTGAAAAAATCCAAAATTAACTCACACCGAACAGTTACTCTTTTTTTCAAAGGTACACAATTGGCTACATTAAATCTATCGTGCGCTTTTCTGCTCAGCAACATTGTATCATACCGCTTTGCAAGGCGAAATTACAACA--CGGAATGCTTCACA ...........:x:.x:..x.-...::.xx:...------:.:.x:..x......x.......:............:..:.:...:...-:.....:..x............................................::.............................................................:.........:.............................:...............................................x....................................................................................................x.......x.:......................x:....:....................xx.......................:...............................:......-x...................:............:x:............--.x.x.......... 21M1D12M6I49M1D430M1I48M2D14M 526/574 91.6% 581/94230402 0.0% 11/574 1.9% 27151434 NA +3406 chr4 + 190214555 54002235 54002234 54002299 65 GAGTTAGAGGGTGTTTTTTGTTTGTTTTGTTTTTTGGATTTTTTTTCCCTTGGTTGATTTCTTTA chr4 - 94230402 82822574 82822573 82822638 11407765 11407764 11407829 65 GGGTTTGGGGCTGTTTTTTGTTTGTTTTGTTTTGTTTGTTTGTTTTTCACTCTTTGATTTTTTTA .:...x.:..x......................x.xx:...x....:.x:.xx.......:.... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% -28820339 -65410063 +25960 chr4 + 190214555 54008552 54008551 54010198 1647 AAAAAATCTTAAATCCTAGTTTTTAAGATAGCTCCTAATATCCAAGACAGGATATAGGA-CATGAGATACTGGCATTTGACTATTCAAATTTATATAGGATTACAGTACTTTGGCAAGTACAAAGAAATACTTTTAAAAATACAGGTAT-----ATAAATTA-------ATGAAACTGGTATTTAAAAGATTTAATACAGGAAAAAAGTATTGTATAGTGGTACCAA-TTCTCA---ATACAAATTATTAAGCATAGTTTA---TATAATTCCAAAAGTTATTAACATTATTGCTCGATACCACAGTTGTAT--GGAACAAGTTCTTGACACACATTAAAACTTGTATA-----ATTTCTGGTTTATAAAAACAAAAATTTACACATAGGTCATTCACAAATCTAAAAGTTTAAAAATGCATAGAGATATGCACAACAAAAA-----GGAGAAAAAATTATATGTATTTGTGTATATGTATATTTAAAAGAAACAAGCTAATCTGATTTAACATGTATGTCACACTCTCAATC---AAAACAAGTATACATA-ACTGTACTGAAAGTGAACT------------------------------------AGTGGATAAAAATAGTACTAAATGCATCCTCCATTTCTTATTAACAATCTTT--TCTAAATATCAACGGGATATTAAATACCAGCTTACTTTTAGTTCTAGAACTTTTGCT--------TTCTTTCAAAAACTTT--TCAGAAACATATATCCATTCTATAATTGTGATAGATTGGAAGAAATA-----------------------TTTTCCTT----AGAAATTTT-GTAAAGGAAT-ACTTCCACTCTTTTGTATGTAAGATTTGATAAACGATAAAAACCCAAGTAAGGCCATTATTATCATCTTGATCAAAAATA-----------------------TACACAGATCGTGATGCTACTATATTGT-GTGATCCTGAGTTCTAGTAACCACTAGATACATGCATACCATTCACTGATTTGTCTATTCTAATAAAA--ATTTAATCCTGTCTTACTACCTTTGAAGACAGAAATACTTTTAAAACTTTTTGATAGGTCTTCATAACATTACAGATTATCTGCCATAAACAGAGCATTAGGAATTGTATGA--GAAAGGGTATGTTAGGTCCCAAAAG-ACTATT---AAAGAAAACTTA-----CTATTTT------AAAATAATGACAATATCAAATTTGAAAAGAAAGAAAAAA--TGACAGAAAAAGTGTGCTTGCTGGAATAGGT--AAGTTGAGCCTTACAAAGGTGTTTTTCTCTGTTAAGGAATTTATAAATAAA-GGACTG----------------------TGTGTACCTTGGTGACAAAATAAAAAAGGCTGGCCACTTTTTATGCTAAGTTCAAATGTATTTTTTTGATAATACA-------------------AAAAAGTAATCCTTGAAAATCAGAATACAT-AACAGAAAAGAGCA-------CAATAACTTAAGTATTA---AACATCTGTATGAAATAACTGTTGCAAAGATTGACAAAAATGCACACTTAGAACATGCGGTTATTTAAAAAAA-----AAACAAAAACAAA--AACAAAAAA-------AACACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGGA-AAGTCTCTATAAATAAAGTAAATGCTAATCTGGTCGAAAAATCGGTGTCTTTGGTAAAAATTCTATGAGGATGACCTGTAAAAGGAGAAGAAAA----AGGTTTTAAAAGATTTAAACAAAATTTTTTCTTA chr4 - 94230402 26856836 26856835 26858593 67371810 67371809 67373567 1758 AAGAAAACTTAAAAC-----TTCCTAGACCACTCCCACTATCAAACA-----TTTAGGAACATAATAT----TCACTAGAGAAT---ATTTTACAGAGAAT--AAATATTTTGA-AGACATAGAAAAATAGTTCACAGCATCAAGGTACCTGTAATATATTACCTTGAAATAAAACTTGTATTTAAAAGATTAAAAAGAGAAAATTACTCTTGTA--GTGGTATCAACTTCTCATTCATACAAAT-ATTAAGCAGAGTATAATATCTGTTTTTCATA--TATTCACATTATTGCTTGCTACCACAACTGTACAAGGAAGATATTCATAGCTTACATTAACGTTCATGTACAGTAATTTTAGATACATAAAG-CAAACTTTAAAATATGATTGAGTAGCAATTTAGAAAAGCTA----TGTGTGAAGATATGTACAACTAAAATACAAGCAGGAGAAAT-----------------------------AAAACACAA-CTGGCCTGACCCAA-GCATACATCATATATCCAGTTTAAAAAAAAAATGTCTTTATACTGTGCAGAAAGTAAGCTTTGTAAACCAAAAGCAATGAGCAGAAGCAAGGGTGCAGTACATAATTATAAAGCATAATTGAATCCACACTGCTGACCAGCAGACCTTGCTTTGATTATTTCTGATACATGGCA------CCTGCATTTGTATCCAGAA-TCGTACTATTCAAGATTAGTCCAATAACTTTCTTCTG---CTTATGTGGCTTaaaataaaatgaaaaatgaaaaaaaataaaaataaaaacaaCCCTGAAAGGTCTGCCTGGAGAAAAAATTTCAGTAAAACAATTCCTTCTGCACCCCTGTATACTGTATCTGGTAAACGGTACAAATAAAATGAAACGTGGCATTAGC--CTGAATTAAAACTGCTACGTTATAAACCAATATATTTTACATTGGTTTATATACTAATATATTGTTGAAATCTTGAATTCTACTAAT---TGGATGCATGCAATTCTCTCAACGATTTTCTAATATGAGTAAAGTCATTCTACTTCGTGTTTTTTCTTCTAAGTTTAGAACTTCTTC-AGAACCAGCTGACAGGACTTCTT-------------------CATGGA--AAGCACAGAGATTCCTACTAATGCAATGGCATATGAGTTCCAAAAAGCACAATTTCAAAAGGAACTTTATTTCCCTCTTTTGTTGGAAGAAGCTAGCCAATATCCAA-----AAAGAAATAAAAATATTTACAGCTGAC---TAGTCACTGACAAAAGTTTAGGTAGATCTTTG--ATGGTATTT----CAGCACATAAACTAATAATTAAAAGGACTTACACGATGTACAATCAAACAATTTTGTCATTTAGGGGTAAAA-AAAAATACCTGCTCACTTGT-AGAACATTTTCAGCTGTGTATTTATAGTAATATATGTACACACGCGCGCACACATAAAAGACTCTCTGAAAATCAAGATACATTAACAAACAGAAGTAGTAAAAGTAATAACTTAAGTAGTAGTTAACATTTGCATGAAATGACT-TTGCAGAGTTTGACCAAA---TGCACTTAGAACATGC---TCTTAaaacaaatggacaaacaaaaacaaacaaacaaaaaaGAATGGAAACACCACAAGAGTCTGTAGAACCAATGCTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGAATAAGTCTCTAAAAATAAATCAAATGCTAATCTGGTCGAAAAATCGGTGTCTTTGGTAAAAATTCTATAAGGATGACCTGCACAAAAAGAAAAAAAAAACAGGTATTAAATGACAGTAGCAACCCTATTACTTA ..:...x......x.-----..::x...:x:....:.x....x..x.-----.x.....-...:.x..----x..:.x..xx..---.x....:.x..:..--x.:..:....:-.:::.:.:.:.....x..:xx.:x..xx.....:-----...x....-------..:.....x..............x..x.x..:...xx.x.x.....--......:...-......---........-........x...x..---.x.:x..::x.x.--....x...........:.x.......::....:--....x.x:...x.::.x:.......x::.::.:..-----....:x.:.x:.....:-....xx..x.x.:..::x.x.x.x:...x.:x:...:x:..----..::.::.......:.....x....-----.x..:.:....-----------------------------..:.x....-..:::....:::..-:::..::...:.:x::..:.:---....x..:.:.x:x..-.....:.x......:.:..------------------------------------...:x....xx...:x:.xx...xx.x:.:x..:.x..x.::.:..:x.:..--.:.:.x...:xx:.:x.:..x:x.------.:.:.x...:xx..:....-.:x.:..--------..xx.:...x......--..x.---.x...:.xxx..xx.xx.xx:...x.:..x::..:.....-----------------------.:.x...x----.:......:-.....:x...-x....::.x.:::.....::x:x..:..:......:..x...:xx..xx..:xx::x:....x.--..x:..:....x.:-----------------------....:x.:.:xxx..:...x........-.x:...:...:.....x...:---.:...:......xx:.x:...x:.....x::x..x:x.:....:--...:x.::::..x..x:.x.:.:.:.:xx:....x.x...:-.:...:xx:...:...x....x.-------------------...::.--:....:x::..x.:x..:x.--.x..x..:..:.x..x...x.....-..x...---....:..x:...-----..x....------.:..xxxx.x.......x..-----.......x.....x--.x....xx:.x---.:x.::...:x.x.:..--.:..x..x.:..:--.x...:...----.x.:xx.x:..:.x....x....-.....x----------------------.x...xx:..:.x.::....-.....x:x...x:.....x.-.x:x:.xx....:x...:.x...x.::.....:.-------------------.x...:x.x..::.........::......-....:.x.::..:.-------:.............x..---.....:..:.......:...-.....:..x.....x...---::..............---.x..x...x...-----.............--.........-------.........x..x...............:........................................................:.-.........x.......x:...............................................:...........:.x..::....:....----....x.....x..:xxx.:...xx:.x..x.... 15M5D27M5D7M1I8M4D12M3D14M2D11M1D34M5I8M7I46M2D10M1I6M3I8M1D15M3I13M2D33M2I35M5I17M1D41M4D25M5I11M29D9M1D14M1D21M3I16M1I19M36I52M2I24M6D19M1D7M8I16M2I4M3D40M23I8M4I9M1I10M1I64M2D14M23I28M1I21M3D44M2I41M1D23M19D6M2D20M2I25M1I6M3I12M5I7M6I20M5D14M2I11M3D17M2I13M2D9M4D23M1I6M22I20M1D20M1D34M19I30M1I14M7I17M3I20M1D18M3D16M3D12M5I13M2I9M7I87M1I94M4I34M 1063/1526 69.7% 1758/94230402 0.0% 353/1526 23.1% 27151716 NA +159665 chr4 + 190214555 54012743 54012742 54016958 4216 TACATTAACATGTTTGATGTAGTAAAGATAAAA-------TCTACATTATTTGGTTCATTGAATAAAGCTAGTCT----AAGACATTTTAAAAATATTTTTTATGTTCAAGGCTAGAAATAGGATTTGACTGTGGGATAATGAAAGAACAGGAAAATGCTAACAGACAAAAATGATTTTATGATAATTTACAACTA---AACACTGTTTTAA-TCAATATTTTACACATACACACGCACACATCTATGATGGCTATATTGTTTTAAAGAATAGACAAAATTCCT------------------------CAGAAATGTTGTAACAGGTACTTCACAAAGGCTCTGAGTTTTATTTTCAACTAT---TAACTTTTCCTTAGATCTTTTCTTTTAAAGTAATAACCTGGCCATATTTAAAATAAAATATCCAAGCTCAAAAGAGAATTAAAATT------CTTAATTT-----TCTAGAGTATTCT--------------GAAATTTTCAAAAGGAGAAAAACTGTTCAAGTAAATCATGGAGTCAGTAAATTAAATCCCATGCTGAGTAAGTTCTAAAATTCATTGTATATATATGCCAAATTAGATATTTTTTAACAAGTAAACA-------------CAAGATGATCAAC--ATCTCATCTCCTGCTT--ACTTTTAATTTT---TACAAAGC-----AGTATTCTAATAA---CACTTTAAAA--GAGATTCTTTAAAGGGCACTGAGGTACGGG-CAGTTAAAATCTATAAAGGGTAAAGGTTTCTTAAGCTCCAATGGCTTGGCTGAAAGGTTTTCTTCCATACTTGGAAACTTGATTAGCATTATATAAAAAAGCCATATCTGACTTGCTGCGTAACCAAAGTTGTGGTTATTCTTTATACAGCATCTAAAATTTCACACTCCATCAACACATGTTCAGGCTATTTTATCTTGGCAATTAATTTATTATTTTTCAGAACACAGTGAAGCCTTGTTTTCAAGTCATTCATAACTTTATAAATCAGTCTTGCACATGAAACCATGCATCTGTGAACCGTAGAAAATCCTTGCACTCAGGAGATTAAGCTCCTGACACCTTTGCTGATTAATAATCATGGAAAGAATAAGATCAGAAGCAAAATAAATGATCATTTAATAGAGAAACTCACAAAACAGCCCTTTAACTTACATATTCCATCATGTTATTCGTTTCACATTTCCTTTTGCTCAGTCTCCAATGCAAGCACAGCTAGACAAGTAGGAAAGTAAAAGAAGAAAAATGAGCTCTATTTTATTGCAGCACACAGACTAACCCATTTGTCCACCTTTCATATTTTTAGTTCAACAAAAGCATCTGTTTCCATACTGTGCAATTCAGACCCCAACAGTACGAAGCTGCTCCCTGTGGTACTCACCTTGTGGTATAACCTATTGTTTTCCCATTCTAATAACTTCTCAATCGATCTTCGTGTCTGGAAGACAAATGAGAAAAAAGTTTACTCTTGACTGGTTTTAG-AAAACTTTGTTTTGCAGCTGCTTTTTCTGTGAAAAGGGGAGAGGTATAAGACAGTGACTGAGTATAGTGTGGTGTGCATCACTATC--GATGTTCTAAGCACTAAATGGTAACCTGAACACAAAA-------------------GAGTA-CTCTTTCTTAAA--------AAAGATATGCC---TTTA---------TTTTTATCATACGAATCTTTTTTTACTAGCCTCTGATTTAAAA-CTATCAAGGTTTAAAAAGCTAATGTCATCT---------------------GCCAAATAAAATTA-------AATTCCCACTTCTTTCAAAAATG---TTTC------CAATACTT--AAATAGTAACGGAAGTTCC------TTAATACA------------TATTTTAAAACAAAAGTAAATATTAGTTAACAAAATGCAAATGGCCTTTCAGTAAGT---TCCAAAA--CAAAAAATTG-----------------GAATATTAAAAAAATCAATGAGTTATAAAATCAAATTAATTTTCACATCATGCTTAAAATAATGCCCATATTTAAAAGCCAGCTTA-----CTGATTATTCTACCAATAGATTTTTTGAACAGAG----CCAAAAT--------------TTTATTTAAACCA-ACATAAAAGTGTCA--------TCTG-ATAGTAAAATCAAAC-----TCTTAATTCAATACTACTG-----------TTTCAGGAATCAA--CTGAGAATTTACTTCAGTTGATTTTTGCAAGATATGCTATGCTGCATGAAATGTTTCTTGCTTGAGAATATGAATAAA-AGAGGGTAATTCATGGTGCCAGGTGTTAGGATGAGACTGACACAGCTGCAGGTGCAAAAATGACAGTGTTGCCACCAGGATCAACTTGCAACTTGGTTCAGCTGCACTTTTCTTGCAAGAGAAAGA-------------------AAAAAACATCTTACCACTATTAATGTGGTATAAAGAAGTACTAGTAATCAAATATGAAAATTTGCGTGTCAAGCAAGGATTAGCTAGGTGAAAAACTGTTAGGATCAAGCTGGGTTTGAAC-AGTTTAATGTTACATAATAAAATTTTAAT--------ATGTATTTAAAGTATCTACTTTAAATAGTTACATTACCTTTTAGCATATT-------------------AAACATGCTAAAGACACACCAAAGTCACATAGATGCCAATTATAATTCATAACTACCAATGAATTACGACTACTGCCTTACATTTTCCAAGCTTATGTCATAAAAATCGGAAAATCAACTACTTCCCTGGGTAATAATATGCCAATGACTAATTTATTACATTACTTT-----------TTCTGAAGAGTCTTTTTGGCA--AGAATTTTAAAGAAAAAAAAGTGCCCTTGTTAACAATGATCAGCAGACCTCACTTGTTTCTTTGTAAAGATAGCCTTTTAGAGGCAGCTCTCCTTTTAAATGAAAATAGGGCAGCAGTTATGGTCACACTTTTTGTTAATTTAGTTGCCAGTCAGCCCCAAATCAAAAGAAAATAAGGCTGCAGAGTGTAATTAACATTCAGTTCGGTCGTTTTGTCCCTTGTCTAGCCCCCAAGCTTTGTTAAAATTGCCATCTGAATGCTGAAGGCTGTAGGGAAATCGATTTGATTCTAATCGCACCATGAAAAGAACATGATCTAACTGCTTTCAGCCCTCCGTAAATCTGTACTAGGTCTTTAGCACAATGCAACTTCCAATTTAAAAAGCACTGAATGTCTCGTCAATGACTTTGTGAAGAAAAAAGAACAAGGAGCAGACATAAAAATTCCAATAGTTGTTTAAGCATTAAAGTTCATTTGCATCACAGCGAACCTGAAAAGGGCTGACCTCTCAAACCGCCTCTCAGGTCTATGAAGTTGTAGCCTTGACAAGCTCACATTGACAGAGCTCATTGACTCTGAAAGGCTACTCTATCAATGGTGAAAAATGGCAATAGGTTCTACTCTGAGCAGGCATCTGCCTGCCCACCCGCTGCTAAACCAATGGCAAAACCGATTCAAAACCTGAATCTACCTTGTAATCTTTCTTTCTAGGGCCTTTTAATAATAGATTAAGATTACTATACAATTTGAGGTTTTACTTTTACTGATGATTTTGGGGGTGGGTGGATGATGAAAGAACTAGAGCAGAACAAGTTTTCCAAGCCCACTGTTTTATATTAATGTATAAAATAGTACCCAAAAGCTTAATACTACATT-CTGCAAATACTTATTACTTAAAGAAAAAAATGTAGTTACCACCATCATTTCATCAGAAGTTTAAACCCATGCTATAATAAGAATAGATCTCATTATGATATATAGACACATACATACACACAATTTTAAAACTTAAAAATATTTACTTTAACTTAAATCAACTACTAGTATTTGAATAAAAGATA---------ATTACAAAGTATAAATCTTGAATTCCAAAATATTTAAGTAGGAATTCTGAATTTCTTCTCTGTTTATAATTAGGAGTTTAATGATAGGGCTTGGTATAATAATTGTATCTTACAATATTTAAGAATTATAAAACAAACAAGCCCTGATATGCCACATTCTGAATAAGCATATAAATATAAAATATTTCTACACACTTCACAGTCTGAAGT-AAAAGCTGTGAATT----AGCACCATCTAATTTTGCTATA--AGACTTCTTTCCTGCTTGACAGGTGAAAAAAAAAGCACTTGCACGTGCAGCTTAATTAATCATTGCACTTGACATCTCAATGATTTACAGTGAGGAGCAGGTGAGAACATACAAAACCAGAAAGGAACCCTTGATTTGAGTGGAACATTTCTAGCACACTAAGGTGACAAGTATATAGATTCTAGCAGTCATTTAAAAAAAAAAGGAAAGAAACTGTGCCACAAATTATTTGTTAGTAACAACAAAAGCTCAAATTAAATAGAAAAAAAAAAGGTTGAGCTACTGAGAATGTTTAATACTATGCAATTATT chr4 - 94230402 26860135 26860134 26864375 67366028 67366027 67370268 4241 TAAATTAACAAGTTT--TGTAGAAAAGGTGATACAAAGTGTCTAC-TTATTCAGTGAATGGAGTAGAGCTACTCTGCAAAAGAAAACTTGAAAAT----CTTATGTTTCAGGCTAGAAATCAGATCTAA-TGTAGAAAAAGGAAAATA---GAAAAGGCTAAAAGGAAAAGGT-----TAAAATAATTTCCTACTATTTAACCAGGTTTTAAATCAATTTT------------------ACATGCCTGATAGCTTTGTTGTTTCAAAAAATAGACAAAGTATCTATGGTCTTTCATTGTACGGTAAGTTAGAACTAATACAGTAGATA-TCCTCAAAGATTATT--CTTTATTTTAAAAAATAGTTAACTCCTCCTGTCACCTACTTCCTAGAGGG----------------TTACATGAAATTCTGCACGTTCAAATAAATCTTACATTTTAGCAGCTTAATTTCACCCTCTCTTGTACCCTCTGTCTATCTCCAAGAGATTTTCAAAATGGAAACA------TAAGCAGCATTAAGAACAAGGAAGAACGCTGCCA-GCTAAACAAA--CTGAAATCC--CACATATGTATAATATATTATGTCCT-----ATAAGTTATCAATGTGCCTTTCTTCAAAAGGCTTATGTGGTCTCAGCCAAAGACTGGAGCTGTAAGTTTAAGCACTGAACTTGAAAATATTTTAGTGATGTCAATTTGAAATAAAGATACTTTCAAGACATTTGAGATAAGGGGCAGTTAAAACCCAAAAAGGCTAAAGGTTTCTTAAGCTCCAACAGCTTAATTGAAAGGTCTTCTTCCATACTTTTCGACTTGATTAGCATCATATAAAACAGCCATATCTGACTTGCTGCGTAACCAAAGTTGTGATTATTCTTTATACAGCATCTAAAATTTCACACTCCATCAGCACATGTTCGAGCTATTTTATCTTGGCAATTAATTTATTATTTTTTAGAACACAGTGAAGCCTTGTTTTCAAGTCATTCATAACTTTATAAATCAGTCCCGCACATGAAACCATGCATCTGTGAACCGTAGAAAATCCTTGCACTCAGGCGATTAAGCTCCTGACACCTTTACTGATTAATAATCACGAAAAGAATAAGATCAGAAGCAAAATAAATGATCATTTAATAGAGAAACTCACAAAACAGCCCTTTAACTTACATATTCCATCATGTTATTCGTTTCACATTTCCTTTTGCTTAGTCTCCAATGCAAGCACAGCTAGACAAGGAGGAAAGAAAAAGAAGAAAAATGAGCTGTATTTTATTGCAGCACACAGACTGGCCCATTTGTCCACCTTTCATATTTTTCGTTCAACAAAAGCATCTGTTTCCATACTGTGCAATTCAAACTCCAACAGTACGAAGCTGCTCCCTGCGGCACTCACCTTGTGGTATAACCTATTGTTTTCCCATTCTAATAACTTCTCAATCGATCTTCGTGTCTGGAAGACAAATGAGAAAGAATTTTACTCTTGAGTGGTTCTCGAAAAACTTTGTTTTGCAGCTGCTTTTG-TGTGAAAAGGAGAGAGGTACGGGACAGTGACTGAGTAGAGTGTGGTCTGCAGCACTACCAAAACTTCCCTGGTTTTAAAAAGTAACCAGTGGAGAAAGTTGTTTTTTTATGACACGCGAATAGCTATTGCCAAAACAGTGTAGAAAGACATAACCAGTTTGGAACAAAATCTGTTCACATGTATACACCTTCATAGCAGTTACAGCTTCAAAACCTATTACAG----AAACTTTAACGTGACCTAAGTATAAATGCAGGAGCATAGCTCAGTGGTATCAGTGGTCTAAACACCACTTCTTAAAAGGTCGGCATTTCAGCAGACAACAGTTGCAAGCAGTATTTACAATGTCATAGGTTGAGTACAAACACGCAGTCGTCTATTTGAGCAAACAAAAAAAGGAGTTGTCACATTTATACTCAGATTTTAGGGAGCGAATCCGAAACGCAAAAAGTTTCAGCAACTCACAGAAGCGAATGTTAGAAAAACCTACGATTTGTATAA--AGAGCAA-----ACCCAGTATTTAGGAT----------TCTAAAGCCAAGTTTAAATGCCTGTCTTTTCCA-CAGTTGACACTTCAGATAGAGAATTCTGAAATCTGTTTCTTCGCAGCTTTTTCAAACCACACACACAAGCACTAAAGGACTTTCTGCACTGTAAAGTTTCACGGCATTTTGAATACAATTATTCTGTTGTATTTACATTTGAGAAATACATTCTGACATTTATGGTCATTTGACTGCCAGAATATATACTGCTTAGCTCTAAATGGGATTTGCTACTGACTATGAATAAATAGAGGATAATTCATGGTGCCAGGTGTTAAGATGAGACCAACAGAGCTGCAGGTGCAAAAG-GACGGAGCAATGACAAGGATCAAA-TACAACTTAGTGCAGCTGCAGCTTCCTTACAAGGCACAGAGGGGTGAGGGGAAGGGATGAGAAAGCATCTTGCTGCTATTCCTACAAAATAC--AAGTACT-GTAA------ATGAAGCTTAACAAATCA----------AGCTAAATGCAGTCCTGGCAAACAAGAAC---GTCTGAACAAAATAAAAATTAGACAACAAATTATTCATTTCCCACCAAATACTAACATCTTCTGCTTTGAAAACTCCAGTTGCTCTCCGGCATAATATTGCGGTGTCTACAGGGAAGCCCGGCTAAGCATGGAGTGCGGTCACGTGATTAAAAATTAGA--TCATTGCCATCCATAAATACTCATTA--AACTGAATTTTTATTATTCTGTATTTTAAAAAGCGT-AAGTCAAGGAATTATCCAGAGGTGGAGGTGCCAGCGACTAATTTATCACTTCAGTTTGGAATTGAGCGTTTTGGGGGTTATTGTTATTATTATGTTTTTAAAG-----ACAGTGCCCT--TTAACAATAATCAGTAGACCTCACTTGTTTCTTTGTAAAGATAGCCTTTTAGAGTCTGCTCTCCTTTTAAATGAAAATAGGGCAGCAGTTATGGTCACAC-TTTTGTTAATTTAGTTGCCAGTCAGCTCCAAATCAAAAGAAAATAAGGCTGCAGAGTGTAATTAACATTCAGTTCAGTCGTTTTGTCCCTTGTCTAGCCCCCAAGCTTTGTTAAAATTGCCATCTGAATGCTGAAGGCTGTAGGGAAATCGATTTGATTCTAATCGCACCATGAAAAGAACATGATCTAACTGCTTTCAGCCCTCCGTAAATCTGTACTAGGTCTTTAGCACAATGCAACTTCCAATTTAAAAAGCACTGAATGTCTCGTCAATGACTTTGTGAAGAAAAAAGAACAAGGAGCAGACATAAAAATTCCAATAGTTGTTTAAGCATTAAAGTTCATTTGCATCACAGCAAACCTGAAAAGGGCTGACCTCTCAAACCGCCTCTCAGGTCTATGAAGTTGTAGCCTTGACAAGCTCACATTGACAGAGCTCATTGACTCTGAAAGGCTACTCTATCAATGGTGAAAAATGGCAATAGGTTCTACTCTGAGCAGGCATCTGCCTGCCCACCCGCTGCTAAACCAATGGCAAAACCGATTCAAAACCTGAATCTACCTTGTAATCTTCCTTGCCGGGACCTCTTAATAATAGATTAAGATCACTATACAATTTAA--TTTCATTGTT-------------------------TGCCCAAAAGAGT-GTGAAAAACA-----TCTAAGCT-----TTTCAAATT----------------CCAATAAAATTACAAATATATTACAACGCATACACATAAATAAGAAACTGATAGGTAGTTA----------------------------------TGTAGTATTAATTGGTTCTCTT---------------AAACAGGAGCCCGGTTTTAAGTC--------ATTTG------------------ACCAGCATTAGATAAAAACACACGCAGCTTTGTGACCAGGATCA---TTTGTGTTCCCAAGGATGTACATCCAAACCCT----------CCTG-----------------------------TAGCATAA---------CTTGGGATATTCACAGCTCCCAAATCACACCACATTATATATACTAAAACGTTAATGAAAATTAGACTGTAAATTATTTCTGCAAATCTCAGAGCTTGGAATAAAAAGAAATGAATTAAGCAGCATCACACAA-TTCACTATAGTAAGTTTTCTTCCTACTTGACAGGTG--AAAAAAAGCACTTGCACGTGCAGCTTAATTAATCACTGCTCTTGACATCTCAATGATTTACAGTGAGGAGCAGGTGAGGATATACAAAACCAGAAAGGAACACTTGATTTGAGTGTAGCATTTCCAGCACACTAGGATGACAAGCTTATATATTCTGTCAATGGTGTACAGAAA---------AACCTATACGGCAAATTATTCGTTAGCCACAACAAAAGCACAAATTAAGTGGAAGAGAGACTTGCT----TATTAGAAAGATCTAACACTATCCAGCTTTT ..x.......x....--.....x....:.:.x.-------.....-.....::..xx..x..:..:.....x...----....x.x:..:.....----:.......:x...........x:...:.:.-...:.:.x..x....:x.---.....x.....x..:x...::.-----..x:.......x.x....---...xxx.......-.....x..------------------....x:x....:...x.:......:...:..........:.x:..------------------------:....x.:x.::.::..:..-.:.x.....::.x.x--:........x..xx..---.....::....xxx.:..x:.:::.x:.:.x----------------...x.xx...x.x.x..x.:.....x:.:xx...x.x..------........-----...xxx...::..--------------..:..........x.::..x.------:...:.:xx:xx:..::x..x..:xxx:x.x...-...:.::..:--..:....:.--:::....:...:x:.x....x:.x:.-----.:....x.x..-------------...:.x.x.:.xx--:.....x.:xxx.x:.--.x:.x...x...---:..x:.:.-----.:....:..:.:.---..x...:...--:....x....x...:xxx:....:..x...-.........:.:.x.....x.....................::....:::........:.............xxx:.............:........x...................................:.......................................:.........::..................................:....................................................::.................................................x.....................:..............:.:..............................................................................................................:.............................x.......x...................x.......................::..........................x......................................:..:........................:..:..................................................................................:..x...........x.....:.x.-.........................x-..........:........:::...............x........x....x.....:.--:.:x.:.:x:.:x:....x:......x.x:x.x...:-------------------..:..-..x..x.:x...--------.....:..:x.---...:---------:.x..xx...:::x.:x::..:x..x:..::x.x.x..:....-....:.x:.----...xx:...:..x.:..---------------------..:x.:.::x..:.-------..x:x.........xx..::x:.---....------...:.x..--..::....x:x:x.:.x:.------.x.:....------------.x.x..x:.:....x:x...x.xx....:x..x.x.xxx.x.x:xx...:..x:..:---...:...--......:..x-----------------....:...:.....:.x.:..x..:..x..--.:.x:..-----..x:x:.::...::..----------.:....:x.x..:...-----...x:.x...:.-..:.x..:x:..:::.:....----.::....--------------:..x..:......-...:.x...::::.--------....-.:x.....:.:xx..-----.:.x...x....xx.x...-----------...x..:...xx.--....x.x..xxxx...x....:.x:::x..x....:..::x:x..x:x.....xxx:.....xxx..x..........-.....:......................:........::...x................:-...:.x.:x::x..x........x-.:......:..x........x:..:...:....:x.x...-------------------.:...:......:.::.....xx.::::x...x--.......-....------.....:x..x:.:x:...----------.....::..x.:xx...x:.::xxx:.:.---..:.....-.:x.x..x:...x.:..:...x.x..x..--------.x:..:.x.x.x:x...:....:..x.x.:xx:..:.::.:::.....x.-------------------.:x.xx.....:x.::x.x::x:.....:.::x.:xx.....x.--....x:.:.:.x..:...xx:x.:..--:x..x.xx....x:x.x::.:.:.:x......x..x-..:....xx.x..x:.::.:x:xx:.x:.....::...........:..x.:.x...-----------..:..::.:x.x..x..:x:.--.x:x........-----.x........--........:.....:.......................................x.x...........................................-..........................:................................................:.........................................................................................................................................................................................................................................................................................:.......................................................................................................................................................................................................................:...x.::..:...:..................:............:.--...:.:.x..-------------------------..x:x...::.x.-.x.x.:....-----..:....:-----...:.x...----------------..x.x..:x...xx.x..:...-.x:.:x....x:..x.x.x.:.:.xx:.x.x.......----------------------------------.:..:..xx...x.:.:::x..---------------.x...x:x:.x.::......:x.--------....:------------------..:..:...x..xx....x.:.---------:.x..x.:.xx:.---:...x:....x..:x..x..x:.xx:..::..----------:...-----------------------------.:.:....---------...:x:.....:.x::x.:x:...x..x..x.xx::xx....:.:.x.x:x.x...:.:x..xx:.x.:....x.......:..x.::...x..::..:.:.-.....xx:......----....:..:x:..-..::.....--.:::..::.....:...........--...................................:...x......................................:.:....................x.............x.:......:.........:.:.......:x....x.....:x..:.x:.x..x.:...---------..x..:.:.x:.........:.....:x...........x........:.:...:.:.:.xxx.:.----..:.:::..x:.:...:.....x..::.x.. 15M2D16M7I5M1D29M4I16M4D30M1D18M3D22M5D18M3I13M1I8M18D45M24I20M1D15M2D16M3I31M16D39M6I8M5I13M14I21M6D34M1D10M2D9M2D26M5D11M13I13M2I16M2I12M3I8M5I13M3I10M2I30M1I762M1I26M1D59M2I37M19I5M1I12M8I11M3I4M9I43M1I9M4D17M21I14M7I23M3I4M6I8M2I19M6I8M12I57M3I7M2I10M17I30M2D7M5D16M10D16M5I12M1D21M4I7M14I13M1I14M8I4M1I15M5I19M11I13M2I78M1I60M1D24M1D40M19I33M2D7M1D4M6D18M10D29M3D8M1I29M8I50M19I44M2D26M2D36M1D57M11I21M2I12M5D10M2D100M1D621M2D10M25D13M1D10M5D8M5D9M16D22M1I38M34D22M15D23M8D5M18D22M9I13M3D32M10D4M29D8M9D102M1I14M4I12M1D9M2I25M2D174M9D66M4D31M 3033/3891 77.9% 4241/94230402 0.0% 675/3891 17.3% 27152608 NA +6993 chr4 + 190214555 54013785 54013784 54014173 389 AAAATAAATGATCATTTAATAGAGAAACTCACAAAACAGCCCTTTAACTTACATATTCCATCATGTTATTCGTTTCACATTTCCTTTTGCTCAGTCTCCAATGCAAGCACAGCTAGACAAGTAGGAAAGTAAAAGAAGAAAAATG--------AGCTCTATTT-------TATTGCAGCACACAGA-------CTAACCCATTTG-----TCCACCTTTCA------TATTTTTAGTTCAACAAAAGCAT----CTGTTTCCATACTGTGCAATTC--AGACCCCAACAGTACGAAGCTGCTCCCTGT--------------------GGTACTC-----------ACCTTGTGGTATAACCTATTGTTTTCCCATTCTAATAACTTCTCAATCGATCTTCGTGTCTGGAAGACAAATGAGAAAAAAGTTTACTCTTGACTGGTTT--TAGAAAACTTTGT chr4 - 94230402 82000388 82000387 82000835 12229568 12229567 12230015 448 AAAATAAAGGAT-GTTGAATACCAAA---TAAATAACAGAAATAATACTTACATATTCCATCATATTGCTAGTTTCACATTTCCTTTTACTCAGCTTCCAGTGCAAACCAAGCTAAGAAAGT----AATTATCAGGGGATTAACACGTATTACAACATTATTTTGATAACTAATGTAACAGGCATAAGCAGTGTCAAATCATTTGGATCTGCAACACTTCAGAGAACGAGATTTAACTTGTAGAAAGTATGGTATTATAATGAGACAGTAAAATTCCTACATGCCAATTATGCAAAAA-GCTTCCCATACTTAATAGCGAAGAAAACAAGCACTCTAACTTCTCTTACCTTATGATATAGTCTGTTATTTTCCCATTCTAATAACTTCTGAATTGATCTTCTAGTCTAAAA---AAATAAGTGAAAACTGTATTA-TGAATGGTTCAGTAGACAGCCTCAT ........x...-:..x....xx:..---:.x.x.....xxx.xxx..................:..::.x.................:.....::....:.....:.xx.....::x....----..x..xx..::..xx..::--------.:.x:.....-------..x..:.:..x:..x.-------::..x:......-----x.x..x:....------x.xx....::.::xx:....:..----:.:.xx:x.x..x..:x.....--.x.:x....:x:.:.:..:x-...:..::.--------------------:.:....-----------.....:..:....::..:..:......................x...:.......xx....::..---....:..x:....x.x..:.x-...x.....:--....x.:.:.::. 12M1D13M3D93M4D19M8I10M7I16M7I12M5I11M6I23M4I22M2I20M1D9M20I7M11I65M3D21M1D10M2I13M 259/376 68.9% 448/94230402 0.0% 85/376 22.6% -27986603 -66243799 +3376 chr4 + 190214555 54017404 54017403 54017618 215 TTAAGAGAATTTAGTGCTTGTGAAAAGCACCAGATTGATAGTCATGGGAACTAAAA------ATCTATTTAGCTGAAAGAACAGGG--GAAGGGGCAGTGCAGGCTTTAGTGTAAGCTTCCCTACAGTGGGCCTTAATCCT---TTTCACTGCTCACACCCTGGGGGTGAGGGGACAGGTTAGCGGTTC--TTTACCAATGTA---ATTCTCC-GTCTTTCTGCAAAAGATG chr4 - 94230402 83672354 83672353 83672564 10557839 10557838 10558049 211 TTAAGTGAATTTAGTGCTTTTGAAAGGTGCCAGATTGACAGTTCTGAG-TCTGAAGTCCTCTATTCATGGAGCAGCTAGACCCGGGCTGTAGCAGCA----------------AATCTTCCTCACACTGCCCCTCAACCTTGACCTGCGGGGCTCAC-CTCTAGCGATGA---GCCGGGCTGGCGGCTCAGTTTCCGAGTCTGTTCATTCTCTGGCCTCTCTGGGGAGGCTG .....x.............x.....:.::.........:...:x..:.-x..:..:------..::..xx...x.xx...x.x...--.x..x:...----------------..x.....::...x..xx...:..:.:.---:.x.:xx......-.:..:.x.:...---.x.:..:.:....:..--...x.x.:.x.:---......:-.:..:....x::.:.x.. 48M1D7M6I24M2I9M16D28M3I13M1D12M3D16M2I12M3I7M1I18M 134/194 69.1% 211/94230402 0.0% 38/194 19.6% -29654950 -64575452 +3061 chr4 + 190214555 54030519 54030518 54030571 53 AAAAGAAAAAAAAAAAAAAATATATATATATATGTATACACACACACACACAC chr4 - 94230402 70707582 70707581 70707634 23522769 23522768 23522821 53 AAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ....x.:.....x.::....x:x..........:....:..........::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -16677063 -77553339 +3421 chr4 + 190214555 54030519 54030518 54030610 92 AAAAGAAAAAAAAAAAAAAATATATATATATATGTATACACACACACACACACACATATACAATATATAAATGTATAAATCTATATTTATAA chr4 - 94230402 70707584 70707583 70707675 23522728 23522727 23522819 92 AACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCAATTTGAGACTGCCGTGATATAAATCTCAATTTAGAA ..x.......x.::....::x............:.............::..x.x..xx.xx.:xx.::x:xx:.........xx.....x.. 92M 63/92 68.5% 92/94230402 0.0% 0/92 0.0% -16677065 -77553337 +3033 chr4 + 190214555 54030520 54030519 54030572 53 AAAGAAAAAAAAAAAAAAATATATATATATATGTATACACACACACACACACA chr4 - 94230402 70707587 70707586 70707639 23522764 23522763 23522816 53 AGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .:.:...x.::....::...............:..:........::..x.x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -16677067 -77553335 +4481 chr4 + 190214555 54030543 54030542 54030661 119 TATATATATGTATACACACACACACACACACATATACAATAT-ATAAATGTATAAATCT-ATATTTATAAAATATATAAATATATATACACACATATATATATGTTTATATTTACTAAAAT chr4 - 94230402 21704674 21704673 21704794 72525609 72525608 72525729 121 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAATCAGAAT ............:................:::....x...:.-...:....:x.x:x..-::.::x.x...x.x....x..:x.....x.x.:........:.:.x.:...xx.::.:... 42M1I16M1I61M 84/119 70.6% 121/94230402 0.0% 2/119 1.7% 32325869 NA +4481 chr4 + 190214555 54030543 54030542 54030661 119 TATATATATGTATACACACACACACACACACATATACAATAT-ATAAATGTATAAATCT-ATATTTATAAAATATATAAATATATATACACACATATATATATGTTTATATTTACTAAAAT chr4 - 94230402 21701101 21701100 21701221 72529182 72529181 72529302 121 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAATCAGAAT ............:................:::....x...:.-...:....:x.x:x..-::.::x.x...x.x....x..:x.....x.x.:........:.:.x.:...xx.::.:... 42M1I16M1I61M 84/119 70.6% 121/94230402 0.0% 2/119 1.7% 32329442 NA +3735 chr4 + 190214555 54030545 54030544 54030651 107 TATATATGTATACACACACACACACACACATATACAATATATAA-ATGTATAAATCTATATTTATAAAATA-TATAAATATATATACACACATATATATATGTTTATAT chr4 - 94230402 21704674 21704673 21704782 72525621 72525620 72525729 109 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGT .......:.:...................:.:..:..x..:...-.x:.:.:...xxx.:x:xx:..:.x.-.x..x.:..:x...:.x.x............x...:. 44M1I26M1I37M 75/107 70.1% 109/94230402 0.0% 2/107 1.9% 32325871 NA +3735 chr4 + 190214555 54030545 54030544 54030651 107 TATATATGTATACACACACACACACACACATATACAATATATAA-ATGTATAAATCTATATTTATAAAATA-TATAAATATATATACACACATATATATATGTTTATAT chr4 - 94230402 21701101 21701100 21701209 72529194 72529193 72529302 109 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGT .......:.:...................:.:..:..x..:...-.x:.:.:...xxx.:x:xx:..:.x.-.x..x.:..:x...:.x.x............x...:. 44M1I26M1I37M 75/107 70.1% 109/94230402 0.0% 2/107 1.9% 32329444 NA +3133 chr4 + 190214555 54031590 54031589 54031645 56 TAAGTAGCCTAGATGTACTTGCTTTTTTTTTTTTTTTTTTTTTTTGTGAGACAGAG chr4 - 94230402 67837400 67837399 67837455 26392948 26392947 26393003 56 TAAGTATCCAAAATGTGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG ......x..x.:....:x..x.x..x.:.................x.....x.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% -13805810 -80424592 +17608 chr4 + 190214555 54048880 54048879 54049345 466 AAAATAAAAACTAGATAAATGCAAGACTTGCTTGTCCACTTCTAAATTTAAATTAAAATATATAATTCAACTTACTCTTTTACTGAGGCAAATAACTGGCCACATACTGCAACCTAATGTGCAGCAGCAACAAAGGCAGCCACAAAGTAGCCAACGTACATTAACAGGAAGGTTCTTCTTAAGACAACTGTTAACTCTGTTGATGCTGGCTTTAAATTCTTCAGGAGCTACCTA-AAGAAAAATTTTAAGAA------ATAATAACAATGCAA--TATTAATGTCAAAA---AACATGACTGATGAGCATACTTTTTTCTAATTT---------TCTCAGAAAAAAACTTTCATTTTGAGGCATACAAATAGTACATAAATGAGACACTCACTTTTCCAGTTAATGAAGAAGGGAATTCAGATTCAAATTTGTTGCTCAGTCCAAATCTATTTTAAAAAATAAGAAGAATATGTTATTACATGTTAT chr4 - 94230402 26871314 26871313 26871761 67358642 67358641 67359089 448 AAAAAAAAAACAAAGCCAATATAATTCTGACT-------------ACCAAAAGTAAGA---ATAGTTCAACTTACTCTTTTACTGAGGCAGATAACTGGCCACATACTACAACCTAAAGTGCAGCAGCAGCAAAGGCATCCACAAAGTAGCCATCGTACATTTACTGGAAGGTTCTTCTTAAGACAACTGTTAACTCTACTGATGCTGGCTTTAAATTCTTCGGGCGCAACCTACAAGAAAAAAGCAAACTACCTATTACCACAACAGTGTGACTCATTATTCTTTGAATGGACCACAACT--TAAGC-----TTTTGCTATTTTAATAGCAAGTCTTA-AATCAAATTCtaattttttta-atattattattattCAC---AGATACTCACCTTTCCAGTTAAAGATGAAGGAAATTCTGCTTCAAATTTGTTGCTTAGTCCAAACCTG-----------AAAAAAAAAATGACATTCCATATGAT ....x......x.:::x...::..xx..x:..-------------.::x...x...:.---...:.........................:.................:........x...........:........x..............x........x..x................................::......................:..x..x.....-........xx:x..xx.------.:x.:....:..::.--:....x.x.:x:..---.x..::...--.:...-----....x...x...---------...:.-..xx...:.:.x.....xxx:-...:x.x..x..:x:.x---...:......:...........x..x.....:.....x.x...............:........:..:-----------..:..:..x...x:...x...:.x.. 32M13D13M3D173M1I17M6I15M2I14M3I9M2D5M5D12M9I5M1D21M1D17M3D68M11D26M 336/427 78.7% 448/94230402 0.0% 60/427 14.1% 27177566 NA +9289 chr4 + 190214555 54048949 54048948 54049121 173 ACTTACTCTTTTACTGAGGCAAATAACTGGCCACATACTGCAACCTAATGTGCAGCAGCAACAAAGGCAGCCACAAAGTAGCCAACGTACATTAACAGGAAGGTTCTTCTTAAGACAACTGTTAACTCTGTTGATGCTGGCTTTAAATTCTTCAGGAGCTACCTAAAGAAAAA chr4 - 94230402 82002778 82002777 82002950 12227453 12227452 12227625 173 ACTCACTCTTTTGTTAAGACAGACTACAGGCCACAGGCTACAGCCCAGTGTGCAGCAGCAGCACAGACAGCCACAAATCAGCCATTTTACATTGACAGGAAGATTCTTTCTTAAACAAGTATTCACACGACTGATGCTGGTCTTGAATTCTTCTGGGGCAACCTGTAAAAGAA ...:........::.:..:..:.:x..x.......x:..:..:..:.:............:..x..:..........x:.....x:x......:........:.....::.x.:....x.:..x..x.x::.........::..:........x..:..x....:x.:..:.. 173M 127/173 73.4% 173/94230402 0.0% 0/173 0.0% -27953829 -66276573 +3409 chr4 + 190214555 54049243 54049242 54049333 91 ACACTCACTTTTCCAGTTAATGAAGAAGGGAATTCAGATTCAAATTTGTTGCTCAGTCCAAATCT----ATTTTAAAAAATAAGAAGAATATGTT chr4 - 94230402 82009373 82009372 82009467 12220936 12220935 12221030 95 ACACTTACCTTCCCTGTCAGAACAGAGGGAAATTCTGTATCAAACTTGTTGCTCAAGCCAAACCTTGAAAACAAAAGAGACAAACAAAATATATT .....:..:..:..x..:.:x:x...:..:.....x.xx.....:..........:x.....:..----.x:xx..:.:.:..:x.:.....:.. 65M4I26M 62/91 68.1% 95/94230402 0.0% 4/91 4.4% -27960130 -66270272 +5636 chr4 + 190214555 54064065 54064064 54064306 242 CCTACTCTTTCGGAAGGCCCCCGACACCAGACGGACACAGGGGAAACGGGGCTCCCGTGGAGTAACGGGGCCCACCCCAGCCC--GCACCTCCCGCCCTCGCCCTCCTCCGG---------------------------GCCTTACACGGTGACGTGACCGGAGCCGCGGACGACCACCGGGTCCGGCGAGTACTTGAGCAGCTGCTCCTCCAGGGCCCGC---------------------------------------------TCCTCGTCCTCCTCTTC---CTCATAGATTTCGTCGAAATCCGCCATCCTGAG chr4 - 94230402 82016868 82016867 82017180 12213223 12213222 12213535 313 CCCACCCCTCCGAAAAgggc--ggcgcggggccgccgcggcgggACGGTGGCAC----GGTGGCACGCTGCCCCTCACAGCCCCCGCAGCTCCGTCCCTCGCTCCCGCCCGGCCCGCCACGCCGCCCCGCAGCCCCCACTCCTTACACGGTGATGTGCCCGGCGCCCCGCACCACCACGGGATCCGGCGCGTCGCGGGGCCGCGGCAGCTCCTGGCTCCGCACCACGGGCTCAGGCTCGGACGActcctcctcctcttcctcatcttcctcctcctcctcctccAGCTCATAGATCGTGTCAAAATCCGCCATGTTGGG ..:..:.:.:..:..:.xx.--.:.:.x:.:.x.x.:.:.x..:.xx.x...x.----..x.xx...xx....x:.x......--...x....xx.......:.:.x:....---------------------------x.............:...x....x...x..x..x.....x..:.......x..xx:x.:..x..x..xx....x..x:....---------------------------------------------.....x........:..---.........:x:...:...........x:..:. 20M2D32M4D25M2I27M27I82M45I17M3I33M 167/236 70.8% 313/94230402 0.0% 83/236 35.2% -27952803 -66277599 +11044 chr4 + 190214555 54064133 54064132 54064421 289 GGCCCACCCCAGCC----CGCACCTCCCGCCCTCGCCCTCCTC---------------CGGGCCTTACACGGTGACGTGACCGGAGCCGCGGACGACCACCGGGTCCGGCGAGTACTTGAGCAGCTGCTCCTCCAGGGCCCGCTCCTCGTCCTCCTCTTCCTCATAGATTTCGTCGAAATCCGCCAT-CCTGAGCCTCCGAGCTCCCCTGCCCAAAGGGCCTGACTCCCGGGGTTGGCGCCGGGGTACCGGCGGGCGAGGCGGCGGAGGCTGAGGGGAGTC------------GCCGCTGCCGCCGGCTCCGAGGCCGCGG chr4 - 94230402 26880312 26880311 26880617 67349786 67349785 67350091 306 ggtccgccccggcctcctctcacctcccgccccggcccccAGCGCGCAGGCCCCGGCGCGGCCCTTACACGGTGACATGGCCGGAGCCGCGCACCACCACCGGGTCGGGAGAATACTTGAGGAGCTGCTCCTCCAGCGCCCGTTCCTCGTCCTCCTCCTCTTCGTAGATCTCGTCGAAGTCCGCCATGGCCGAGCCCGGGAA-----------GGGGAGGTCGAAGTGGGAAGCCGAggcggcgggcccggcgggtg----ggcggggggcggcgggaggcccaggtcccggggccggagcgggcggcggcaggcccgcgg ..:..:....:...----.x............:x....:.xx.---------------...x..............:..:...........x..x...........x..x..:........x..............x.....:..............:..:..:.....:........:........-x.:.....:xx..:-----------:::.:.x::..xx:xx.::.::.:x..x.x..xx........:.----.....:..x:.:x.....x.------------....xx..x.x....xx.::.x...... 14M4I25M15I129M1I14M11D44M4D20M12I28M 205/274 74.8% 306/94230402 0.0% 47/274 17.2% 27183821 NA +3004 chr4 + 190214555 54080116 54080115 54080165 50 ATATATATATACATATATATATGTGTATATATGTGTATATGTATGTGTAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...:........:.......x.......:.x::...:.:...:....x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 34375836 NA +3139 chr4 + 190214555 54083006 54083005 54083056 51 TTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACTGAGTCTT chr4 - 94230402 7632211 7632210 7632261 86598142 86598141 86598192 51 TTTTCTTTCTCTCCTTTTTTTTTTTCTTTTCTCCATTTAAAACTGGATCCT ..........:..:...........:....:.::x...:.:....::..:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 46450795 NA +47967 chr4 + 190214555 54095469 54095468 54096543 1075 GTTTGCAG-GTTATAGCCTTATCT-----GGGGACCCACGTTTTCCACCCTGGCTACACATCCTGT-GAACAATTGCCTCTCCAGAGCCTGAAAGGAGAGCGAGCGCCCCATTTCTGCTGAATACACTTCTCAGTTCATCCAAGGCTGGCGGGCTTTTGATGGC-CACAATGCAAGTTACGCCCAAAGAGTGTCTCTTTGGTCAGATCGACAACGCTTGGCTTCACGTTTGCAAGTTAAACGGGCAGAAACCCGGCTGAAACTCCCACGCCAGACGCCA-GGGACGTTTC-----CCTCCGCCCTGCTCAGAGCAAAACTGGGGAATGGGTCTGGGCGGGGGGAGGAAAGAAAGGAGGGGTAGTTGTGAGCAGAGGGTGGGGGAGAAGAGAGTCCTTATTCTCAACAGCCATCTAGAAGAAGAAAGGGGGGGGGGCATTTTCTCTGGCATTTCTTATTTTTATTTTTTCCATTTTGCTTTGTTGGCAGCTTTACCCAAACAAAAAATAAAATAAAATGAGAGCATTTTCTTCTTGTCTTCACC---TAGGTAGCTGCTTTCCTCCAGCCCCTGAAAATGTGACTCCTTCATAAAATCAAAATTTATGATTATTCAAATGTTGGGGACTGTGAAAAGAGAGGAAGAAAGAGAGAAAATTAATATTGCAGCTGTTCTTCTGATTAATGAGAGATAATTGCTCATGAAAAGTCACCCCTGTGGCATTTTGTTGTCTCCTGGATCTTTGTTCTTTTCC-ACTATTATTGAGGACTTTCTTGAAGACTAAGCGGTTCTTTTCAATTTTTGGGTATTCAGAAAGGGTTGCCTGGTTACAGAGAATGGGGAAATCTCGGGCTATATCGGGTAAGATGTGCCACAGACAGCAATATCACAATGCCACTCGGAGAAAAGGATGGATACAAGTTAACGATGCACTTTCAATAAAACATTCATAGACTTGTTCACGCTTTGATAATGACCTCATTAAAGGGAGCTGGGGGCAAGTAAGTCCTGTC-----------TCCTGTTTGTGTTCGGCTAACAAAACCCAGCTTTGAGATCATTCATCGCTTTGGAAACTAATATGAAATCAATGTAAGA chr4 - 94230402 26890044 26890043 26891084 67339319 67339318 67340359 1041 GTTTTCAGTGTTACACCCCTCTCTTTGGAAGGAGTGCGGTTTTCTGGCCGCGGCGACATCGCTCGTTAAACAATCAGCTCCCGAGC-CCTGAAAGGAGAGGCATTGCACCCTTCTTGCTGAATGCACTCCTCAGTGCATATAACGCCAG-GGCCTTTTGATGTCTCACAATGCGTGTTACGCCCCAAGATTGTCTCTTTGGACAGATCTACAACGCTTGGCTTCATGTTTGGAAGTTAAATGGCCAGCGAAGTTGTCGAAACTCCCACGTCTGGAGCGGCGAGGCGCTCCGACCGCTCCATccccgcccgccgc----cggggccgtggggctg--cggggcggcggtggggcggcggggcggc--------ggggccgggcctcgggcggcTCC-----------------------GAGGAGAGGGGAAAGCGGCCCGGCCCCGAGTTTTTTCTCTTTTCTTTTCTCCGCTTCATTCT-TTGGCAGCCTTAA------------------AAAAGGGGGCCGTTTGCAAAGCGTCCTCCCCGTGTAGGTGGCTTGTGTGTCGAAGCCGCTGGCAATGCTGCCGCTCCATGAAATCAAAATTTATGATTATTCAAATGTTGGGGAGTGTGAAAAGAGAGGAAGAAAGAAGGAAAATTAATATTGCAGCTGTTCTTCTGATTAATGAGAGATAATTGCTCATGAAAAGTCACCCCTGTGGCATTTTGTTGTCTCCTGGATCTTTGTTCTTTTCCCACTATTATTGAGGACTTTCTTGAAGACTAAGCGGTTCTTTTCAATTTTTGG-TATTCAGAAAGTGTTGCTTGGTTACAGATAATGGAGAAATCTCGGGCTATATCGGGTAAGATGTGCCACAGACAGCAATATCACAATGCCACTCTCAGAAAAGGATGGATACAAGTTAACGATGCGCTTTCAACAAAACATTAATAGACTTGTTCACGCTTTTATAATGACCTCATTAATGGGAGCTGTGGGC----AAGTCCTGTCTTTTTTTTTTTTTTTGCTTGCGCTCCCTTCACACAGCCCGGCTCCGAGACGGCCAGCGGCTTTGGGAGCCGATACCGAATCGATGTTGGA ....x...-....:.x..:.x...-----:..:::x.:xx...::x:..x:...x...:xx.::..-:......::x...:.x..x-.............xx.x:..x..x..::........:....:......x...x:..x..::.-..x.........x.-........:x.........x....x...........x......x................:.....x........:..x...x:.xx:x.::............:.x.:x..x:-.:.:..:.:.-----.::.xx...:..:.:xx..----.x...xx:....x...--.....x.:x.:x:.::x..x....::.:--------.:..x:...xxxx::.x.:x...-----------------------..:..:.....:::.x.xx::xx.:.:.:xx...:.:x:....x....:...::..:::.:.-........:...x------------------....x.:.:x.:...x.xxxx:...:..x..---.....:...xx.x.x::xx....x...:x....:x:.:x..:...:..................................x......................::.......................................................................................................-...................................................-...........x.....:..........x.....:...........................................................xx.............................:.......:........x...................x................x........x....----..........-----------.::..:...:.:..xx:.x...x.:...:...::....:x:::x::x.......:.:.::...:x:....:....x:.. 8M1I15M5I37M1I19M1D62M1D14M1I114M1I10M5I19M4D16M2D28M8D23M23D62M1D13M18D31M3I208M1I51M1D193M4D10M11I79M 784/1012 77.5% 1041/94230402 0.0% 92/1012 9.1% 27205425 NA +22615 chr4 + 190214555 54097112 54097111 54097474 363 AAAGAACAATTTTGTTACCATCACATATGTGACACTGTCTTGCACTCAAGGAAGACAAAACCATACTCTATTGTCCCAAGCAAGAGGGAGATAATAAAAAGATTTCCCCTTTCCTTTAAAAGAACTAATTTTCTCCTTGAATTATGAAAGTAATGGCTTAGGTAACAGCCTGTACTCTGTACCCGACTGCTTAATACAGAATAAATCCTTCCACGTGGCTCCTGGAGTTGTGGCAATTAGAGCTCATTATAGGCTCATAAGAGCTCTCATTTTGGGGATTACTTAATGGACGATGAAATTTTATCGGACAGAATCACTGAGAAATAAAATTGTGTGGCGGCTCAGACACCATGGGCACACGCC chr4 - 94230402 26892266 26892265 26892621 67337782 67337781 67338137 356 AGGGGGCAATTTCGTTACATTCTCATTTGTTACACTGCCTTGAACTAAAGGCAGACAAAGCTATACTCTGTCACCCCGAGCAGAATGAAGGGAATCAAAGGATTTTCCCTT------AAAAGGACTAATTTTCTCCTTGAATTATGAAAGTAATGGCT-AGGTAACAGCCTGTGCTCTGTACCCAACCGCTTAATACCTTCTAAATCCTTCCACGTGGCTCTCCCAGTCGTAGCAATTAGAGCTCATTATAGGCTCATAAGAGCTCTCATTTCGGGGATTACTTAATGGACAATGAAATTTTATCGGACAGAATTATTGAAAAATAAAATCGTAACGAGGCCGATGTGATGTGGGCGCACGCC .::.::......:.....xx..x...x...x......:....x...x....x.......:.:.......:.:::...:....::.x.:..:x...x...:.....:.....------.....:...................................-..............:..........:..:.........xxxx....................::xx...:..:........................................:..................:......................:.:...:.........:..:xx.x...:x.x:::x::.....:...... 111M6D41M1D204M 292/356 82.0% 356/94230402 0.0% 7/356 2.0% 27204846 NA +14883 chr4 + 190214555 54098464 54098463 54098700 237 GAGCTGCCCCATGTTAAGCCCTGAGACTCCTTAATTGTTGTCACAAGATGTTGGATTAGCACATTTCTGGAATAGCTGTCTGTTTACACTCCAGAGACCCACCGTCCACTAACCGCTTTCTAATTGAATTCTAATCACATTCAAATAGCTCAATAACCAGCCTCAGCTGCAATTCATAAAACTTTAATTGCCATCCATAAATCCTGGGCTCCCCAGAGCCGGGCATCCCTACAACCC chr4 - 94230402 26893093 26893092 26893327 67337076 67337075 67337310 235 GAGCTGACCCGCCGAAAGCCGCCGG--TCCCTAATTGTTGTCACAAGACGCGGGATTAGCGCATTGCTGGAATAGCTGTCTGTTTACACTCCGGAGCCCCGCCGGCCGGTAAACACTTTCTAATTGAATTCTAATCACATTCAAATAGCTCCATAACCAGCCTCAGCTGCAATTCATAAAACGTTAATTGCCATCCATAAATCCTCACTTCGCGGCTGCGGAGCGTCCCTAAAACTC ......x...::xxx.....x:x:.--...:.................:.:x........:....x..........................:...x...:...x..:x...x.:....................................x..............................x......................x:x:..x.x:xx..x.:..:......x...:. 25M2D210M 195/235 83.0% 235/94230402 0.0% 2/235 0.9% 27205371 NA +10202 chr4 + 190214555 54099980 54099979 54100460 481 CCCCCATCCCCCTCCCCCGAGTTCTTCCCCGCCGCGCGCCCGCCCCTCCTCGCGGCTTCTGTTGTGACTCGGGCAGCCTATCCCGAGGGTGCGGAGCTGCCGAGGAGCCTGAG--CCGAGCGGTACTCCGCAGCATCACGTGCCAGGGTGGGGGGCTATAAAATACCC-GAGCCGGGGCGCCGGGCGGGGG-ACGTGAGGACCAGCCCTCTCCGGGGACCCCTTTGTTCCCAGCCCAGACGCCAACACCTCTGCGTCCC-CAAGGGCTTGACTGCCCGTGTCTGCGCGGCTCCCAGGGCAGAGCTTAGAACACTAGAGGAGAGGGGTCGCCGCGAACTGCCGGGGCTTCCAGCCACCCACCCCTCTCGACATGTCGCGCTCCTTCTATGTCGACTCGCTCATCATCAAGGACACCTCACGGCCTGCGCCCTCGCTGCCTGA--ACCG----CACCCCGGGCCGGATTTCTTCATCCCGCTTGGCATGCCGCC chr4 - 94230402 26894506 26894505 26894904 67335499 67335498 67335897 399 CCcccctccccttccc------tcctctcc-ccgctcccctccccctcccctcg-------------------ccgcctctcccGCCGGC-CTGAGAAGCTGGGCAGATTTAGGTCCGAGAGGCTTTCAGC--CATCACGTGTTTAAATAGTTGA-TATAAAACCCCTAGCGCAGGGGATCCAGGCGGGGGGACTTTAAGACCAGCCCTCTCCGGGGACCCTTTTGTTCTCCTCTCCAACATAAGCACCTTCTCGCCTCGCCAGGACTT------CAGTGGCAGCCCGGTCGGCAG--CAGCGC-------------------AGCCCGCCGCGA------------------------------------TGTCGCGCTCCTTCTATGTGGACTCCTTAATCATCAAGGACTCCTCGAGGCCGCTGCCGGCCCTGCCCGAGCACCACCACCACCACGGGCAGGACTTCTTCTTCCCCCTCGGCGTGCCGTC .....x.....:....------..:..:..-....x.x..:x.......:.x..-------------------.x....x.....xx..:-.x...xx..:.:.x..x:.x..--.....x..:x:..x..--.........::x:::.:.xx.:-.......:x..:-.x..x....xx..:........-..x.x.:......................:.......:.xx.:.x:..::x.:.....::x..:.:.-.x...:...------.x...x.x..x...::xx...--...x..-------------------:.x:........------------------------------------...................x.....x:.x............x....:x....xx:...xx.x.....:..--...:----....x.....x...:......x....x..:...:.....:. 16M6D8M1D23M19D17M1D22M2I16M2D22M1D12M1I22M1I67M1I9M6D21M2D6M19D12M36D70M2I4M4I41M 285/388 73.5% 399/94230402 0.0% 104/388 26.8% 27205474 NA +20405 chr4 + 190214555 54101575 54101574 54101936 362 TCCGCAGGAGGCTCTGACGCCAGCCAGGTACCCAATGGCAAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTACCTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAGGGGAAGGGCACGCAGAGGAACAGTCACGCGGGCTGCAAGTGCGTCGGGAGCCAGGTGCACTACGCGCGCTCCGAGGATGAGGACTCCCTGTCGCCGGCCTCAGCCAACGATGACAAGGAGATTTCCCCCTTATGA---GGGAGGGCCTCCTC chr4 - 94230402 26895877 26895876 26896241 67334162 67334161 67334526 365 TCCCAAGGAGGGTCCGATTCCAGTCAGATCCAGAATGGGAAGAGGATGCGGACGGCGTTCACCAGCACGCAGCTCCTGGAGCTGGAGCGGGAGTTCTCGTCCAACATGTACCTGTCCCGGCTGCGCCGCATCGAGATAGCCACGTACCTGAACCTCTCCGAGAAGCAGGTGAAGATCTGGTTCCAGAACCGCCGCGTCAAGCACAAGAAGGAGGGCAAAGGCGCCCCGCGGAGCTCTCACGGCGGCTGCAAGTGCGGCACGGGCCAGGGCCACTTCCCCAGGTCGGAGGACGAGGAGTCCCTGTCCCCATCCTCGGCCACCGAGGAGAAGGAGATCTCCCCGCTCTGAATCGGCGGGGACACCTC ...xx......x..:..:x....:...:.x.xx.....x.........x.............:........:...............x.:..:.....x.................:..:..x..xx.x..:..:..x.....x...........x..x..............:........:...........x..x.................x..:...:.x.x.x...:.xx.....xx.............x.:x.:......xx....x.x.xx.x..x.....:.....x........x..:x....:....x...x..x........:.....x:.x...---..x:...x.x.... 348M3I14M 287/362 79.3% 365/94230402 0.0% 3/362 0.8% 27205698 NA +4403 chr4 + 190214555 54101599 54101598 54101787 189 CAGGTACCCAATGGC----------AAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATG------TACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTACCTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAG chr4 - 94230402 9818922 9818921 9819120 84411283 84411282 84411481 199 CAGGTGTTCAGCGGCGGGAGGCAAGAAGAAGACGCGGACCATCTTCTCCAAGAGCCAGGTCTTCCAGCTGGAG------TCCACCTTCGACGTGAAGCGCTACCTGAGCAGCGCCGAGCGGGCCGGTCTGGCCGCTGCGCTGCACCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGAACCGCCGCAACAAGCTCAAGAGACAG .....:::..::...----------....:..:.x....x::x...x.:.:x.xx..:x..:.xx........------.:.x.:.:.:..:..------......xx:x.xx:.x:.x..:::.:xx.x...:..xxx...x....xx.x....x.........:........:...........x:xx....x.....::x.. 15M10I48M6D15M6I105M 118/183 64.5% 199/94230402 0.0% 22/183 12.0% 44282677 NA +4704 chr4 + 190214555 54101614 54101613 54101793 180 AAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATG------TACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTACCTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAGGGGAAG chr4 - 94230402 9809502 9809501 9809675 84420728 84420727 84420901 174 AAGAAGACGCGCACGGTGTTCAGCCGCAGCCAGGTCTTCCAGCTGGAG------TCCACCTTCGACGTGAAGCGCTACCTGAGCAGCTCCGAGAGGGCCGGCCTGGCCGCCTCGCTGCACCTCACCGAGACGCAGGTGAAGATTTGGTTCCAGAACCGCCGCA------ACAAGTGGAAGCGGCAG ....:..:.x.x....:.....x:x...xx..:x..:.xx........------.:.x.:.:.:..:..------......xx:x.x::.x:....:::.:xx.x...:.:.xx...x....xx.x....x.........:..:.....:...........x:------.....x:.:..x..x.. 48M6D15M6I88M6D17M 112/168 66.7% 174/94230402 0.0% 18/168 10.7% 44292112 NA +3182 chr4 + 190214555 54103603 54103602 54103670 68 GCGCGCGCGCACACACACACACACACACACACACACACACACACACACACACAGTAGGCTCAGAAGGA chr4 - 94230402 14964833 14964832 14964900 79265503 79265502 79265570 68 GCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAATAGGA ...:.:..:...::::.:::.:.:...xx........::.............x..x.:..x.:x.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 39138770 NA +20092 chr4 + 190214555 54107031 54107030 54107378 348 CCCAGGAAGGCCCCAGGG-----GCTCCCCTGAGTGAATCCTAACAGATCGGAAGTGTATGCTGTGTGCTTAGG-AAAGTAACTAGTTTCAGATTAATGAAGCAGTGACAATTTCAATCTGCTTAAAGGCGGAGGTTGGCACTGCCCAGGCCTGAGCGTGGGGAGCTCGCCAGGCTGGGCTTTATATTGTCCCCTTTTCTGAAGAGCAGACAAAGATGGATAGAGAGACATTGAAAAGCAAGGGGAGTATTTCAAACAGTCTCATAAAGCAGGCTGTCACTTTAAGACAAGAACCATAGTGCTTTGATGACTTTGTATTAGCTGCACCATTTCAAATAGGGGACTCAAGTCTCT chr4 - 94230402 26898786 26898785 26899129 67331274 67331273 67331617 344 CCGAAGCAGCCCCCCGGGAGAAGGCTGCTGCGGGCGAATCCAAAGGGATCGGCAGCGTGTGCTGTGCGCTCTGGCAAAAAGACTGCTTGCAGATTAATGAAGGAGTGACAATTTCAA----------GGCTAACGTTGGCACTGCCCAAGCCAGAGCGTGGGGAGCTCGCCAGGCTTTGCTGTATATTGTCTGGTTTTCTGAAGAGCAGACAAAGATGGATAGAGGGACATTGAAAAGCGGGAGGCGTATTTCAAGCAGTCCCATAAAGGGGGTTGTCACTTAAAGACAAGAACCATAGTGCTTTGATGACTTTGTATTAGCCTCACCGCTTCACAGAAGTGACTCCGCTCCCT ..x.:.x..x....x...-----...x.:x:.:.:......x..x:......x..:..:.......:...:x..-...:x:...:x..x.............x..............----------...x:.x..............:...x.......................xx...x.........:xx...............................:.............::.:..x.........:.....:.......x:..:........x.......................................:x....::....x.x.:.x.....x:x..:.. 18M5I51M1I42M10D227M 277/338 82.0% 344/94230402 0.0% 16/338 4.7% 27208245 NA +39000 chr4 + 190214555 54108420 54108419 54109615 1196 TTTTTTTCTTGGATACGGGAACCAGAACCACGAAATCCTGCAAGCTTTGAAGGC-CGGCGAAAGGGCTCCCCCGTCGGTGGCGCCGGAGGGAGAAGCGTTTAGTCACTGTTTCATTAGGCACTATTTGAACCTTGCAACATGTGGTAATTTCTGGGGCAAGCTGAAAAGGGGGGATTATGTAGGAGGGACATAAGGAAATTAGCCAACGGTTAATTTAACTCGTTTTCTGCTAGACTTTTCGATACATTCCTAATTGACTGAGG-GGCAGGTGAAG-CTCCCGCCCCATGCAGGCTCATTCACGGTGGGAATAAATGGCTCTTTCTCAACTCACACTGCTCACAATATATCATCAGGGAAAAGACATGCAATGAATATGTTGATTT--------------TTTTTATTAATGGAATTACACCCTGCCATGCAGGTGTGAGGGTAAAAACCTATACTGCAATGAAATAAGATTAACAATGAAATTAGAATTTTATTAGCTTTATATGTCACACAGACCTGGATTTGAACTGTCAAAACAAGCAACAAGA-------AAAGATATTCTGAACGCAGCCCTGTCAATCAACCAGGAGAAACGA--------ACAGCGTGGTATCGAAATCATAATCACC------TTCCAGT---TCTTCA------GCGCCTCACTTGGGCCTTACGTGAGAAGCAAGTGGGTGGAGGACCCCGCGTGGGCAAAGGCCTGGTCTCTGGACCTGCAGATAGTAGATGAAAAACACCACCTGGGTTCGGTAGACCCGGCCTAAAAAAGGCTCGGGTCCAG--GCTAGAAGGGCCTGGATGGCCCGAGGCCTCCAAGATATCAGACGGACCGGCTGGGCACCCGCGGCCTGCAGGCCATATTTCGCGTCCTCCAAATCAGCTGCCTAGGGCGGGCCGTGACCCGAGGGAATTGGAGAGAAAAGTCCAAACGCTGGGCGAGAGGCGGGGTAGGGCGCCCTTTGGAAACCGCCCTGGGTTTTGTTACTCCGGGGCCCCCGGAGCTTCGGCACAGCTACCTGGGTCTGGCAGGCGCAGAGGTGCCGTATGCAAATGGTTCACTATTAGGCGAGAAAGAAATACTTCAAATGGCCCTTTGTAACCTTCTATAGAAAATCGAGGTACTCTGCATGACAAAGCACAATTAAGCTTTCTATTCAGGAGTTCTGCAGCTGGTAGCCCATTGGGAAAGTGGGAGGAAACGCGAATATATTAATAGTGTG chr4 - 94230402 26900238 26900237 26901271 67329132 67329131 67330165 1034 TTCTTTCCTAAGACAGGGACCCCCGACCGCTGCAGCCCCACAGGCTTTGAAGGCACAGCGAAAGGGCTTCGCTGTGAGTTT-------GAGCGAACCATTTAGTCACTGTTTCATTAGGCGCTATTTGAACCTTGCAACATGTGGTAATTTCTGGGGCAAGCTGAAAAGGGGGGATTACGGAGGAGGGACACAAGGAAATTAGCCAACGGTTAATTTAACTCGTTTTCTGGTAGAATTTTCGATACATTCCTAATTGACAGAGGAAGCAGGTGAAGTCTTCGGCTCCCGGCAGACTCATTCACCGTGTGAATAAATGGCTCTTT-TTAACTCACACTGCTCACAATATATCATCGGGGAAAAGACACGCAATGAATATGTTGGTTttattattattattattattattaATGGAATTACACCCTGCCACGCAGGTGTGAGGGTAACAACCCGCCCCGCGAAGGAATCAGATTAACGATGAAATGAGAATTTTATTGGCTTTCTATGTCGCGTAGACCTGGATTCAAACTGTCAAAACAAGAAACAAGACGGGGAGAGAGATACTGTGAAGGCAGAGGTGCCCGTCAACGGGCAGAGGCAGCGGGATCCAAATCTTGCTATCCAAATAATAGTTAGCCGTAATTCGCAGTGAATATTCACAGCCCACGCTCCACTCTGTTTATAC-----------------------CTCCTGTAGGACATATGATTAGCCTATAA------------------------------------CGGCCCATCTCTCCCGA-----GCCCGGGCTCTGCCGTTA-----GCCCCCATCGCT-----CCTCTTTGCTACGAAAC-----------TCGCCCGCGGCGT--------------------CCCACTTCTATCGCCCCGTGTGGGAC---AGCGGAGGGGCT-------------------------CCAGGAGTGGGATCGGTCCCCCCGCGGGCGCTA-CCTGAGCGGTg------cggggccgcccgcccgcc--cgccgccACCT-----------CCGCTGGGGC--------------------------------------------------CCCTTTGGAACCTGCTATAGAAAAGGGAGGTACTCTGCATGACAAAGCACAATTAAGCTCGCTATTCAGGAGCGCTGCAGCTGGTAGCCCATTGGGAGAGTGGGAGGAAACGCGAATATATTAATTATGCG ..:...:..x:..:.x..:xx..x..x.xx:.x.::..::..:...........-.:...........:.x.:..x:..xx-------.:.x...x.:......................:.........................................................:.x..........:......................................x....x.......................x....-:..........-..:.x..:..xx....:.........x...x................-.:...........................:...........:...............:...--------------..x.........................:................x....:::x.:..:.x.:...x........:.......x...........:.....x......:.::...........::...............x.......-------.:.....:.x....x....xxx..:.x:.....x:.x...::.::--------.x.x.x..x....x....x...:.:.x.------.:x....---.x....------:...::....:x.x::x...-----------------------.:..xxxx..:..x.x.x:.:.:..x.::------------------------------------...:xx.:.:xx..::.-----..:....::.x.--.:..-----...:xx..x..:-----....:xx.x..:x.:..-----------x.:........x.--------------------:...xx..x:::...:x.x.:...x.---.x.x.....:x.-------------------------.x..::.:...:.x..x.x...:x:..:x:.::-....:.:xx..------.......x..x.xx.x:.--.:.x..:....-----------x...x.:..:--------------------------------------------------.......x.....x..........xx.................................:x...........:x.......................:...........................x:..:. 54M1I26M7D176M1I11M1I47M1D61M14I148M7I45M8I28M6I7M3I6M6I20M23D29M36D17M5D12M2I4M5D12M5D17M11D13M20D26M3D12M25D33M1D11M6D18M2D11M11D10M50D131M 768/985 78.0% 1034/94230402 0.0% 260/985 26.4% 27208182 NA +3194 chr4 + 190214555 54111230 54111229 54111306 77 TTACTAGCAGTGTGACCTCGGGCAATTCACTTCATCCCTCTGACTTCCACTTGCCTCATTTGTAAAATAAGGATAAT chr4 - 94230402 11947208 11947207 11947284 82283119 82283118 82283195 77 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAAT .:....:.x.........::..:x.x......x...:x:...xx.:...x..x..:...x.:.:....:.xx..... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 42164022 NA +3065 chr4 + 190214555 54130490 54130489 54130545 56 TTCATTCATTTCTGCTCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37306409 37306408 37306464 56923939 56923938 56923994 56 TTTATTCACTTCTGTTTTTAACTTTATTTCTTTTTCTTCTTTTTTTTCTCTTGTTT ..:.....:.....:.:.x.x:...x...:.....:..:........:.:..x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 16824081 NA +3337 chr4 + 190214555 54133258 54133257 54133321 64 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237697 9237696 9237760 84992643 84992642 84992706 64 GGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:..x.x..x.:......:..:x..x.:...:.....:....:....:..:...:....::... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 44895561 NA +3012 chr4 + 190214555 54157125 54157124 54157185 61 AAGAGAAAGGAAGGAAGGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAA chr4 - 94230402 37794329 37794328 37794389 56436014 56436013 56436074 61 AAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAA ..:.:...::..::.:..::..::x...x.:...:.:.....:....:........:::.. 61M 40/61 65.6% 61/94230402 0.0% 0/61 0.0% 16362796 NA +3356 chr4 + 190214555 54157128 54157127 54157189 62 AGAAAGGAAGGAAGGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAA chr4 - 94230402 37794330 37794329 37794391 56436012 56436011 56436073 62 AAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAAA .:...::..::..:.::..::..x...x...:....:..:.....:.......:....::.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 16362798 NA +3295 chr4 + 190214555 54157141 54157140 54157190 50 GGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAG chr4 - 94230402 59650634 59650633 59650683 34579720 34579719 34579769 50 GGAGGGAAGGGTGGAGGGAGGCAAAAAAAAAAAGGGGGTGGGGGGGGAGG ...:.......x.........x....:.....:.....x.:..::...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -5493493 -88736909 +3372 chr4 + 190214555 54157158 54157157 54157261 104 GAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGA----GGAAGGAAGGGGGAGGAAGGGAGGGAGGGAGGGAG chr4 - 94230402 93153859 93153858 93153966 1076437 1076436 1076544 108 GAGGATGAGGAAAAGCAGCGGTTGAAAAGACCGGAGGGGGGCGGGGAGGGGAATAAAAAAGGGTGGGGATACCAGAAAAAGTGTAGAGGCTGGAAAAGAGGTGGAGAG ....:x:.:.....:x:.x..xx:::...:xx...:.....x:.......:..x:........x.....----:...::.:x.x:....xx..:.::....x:.:... 69M4I35M 66/104 63.5% 108/94230402 0.0% 4/104 3.8% -38996701 -55233701 +3295 chr4 + 190214555 54157186 54157185 54157235 50 GGAAGGAAGGGGGGAGGGAGGGAAAAGAAAAAGGGGGGGGAGGAAGGAAG chr4 - 94230402 59650634 59650633 59650683 34579720 34579719 34579769 50 GGAGGGAAGGGTGGAGGGAGGCAAAAAAAAAAAGGGGGTGGGGGGGGAGG ...:.......x.........x....:.....:.....x.:..::...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -5493448 -88736954 +3124 chr4 + 190214555 54157548 54157547 54157603 56 AGAAAGAAAGAAAGACAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAGGAA chr4 - 94230402 16975759 16975758 16975814 77254589 77254588 77254644 56 AGACATAAACAAGGACAAGAGGAAGGAGAGAGAGAACGTGAGGGAGAGGAAAGGAA ...x.x...x..:....:.::..::..........:x.x...:......:...... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 37181789 NA +3074 chr4 + 190214555 54158919 54158918 54158991 73 ATGTTACATAAGGATTATTCAGTA----TTCATGTATATGTGTGTGTATATATATATATATGTATGTATTAGAGATG chr4 - 94230402 9151828 9151827 9151901 85078502 85078501 85078575 74 ATGTAACACAA---TCTTTCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAGGAGTG ....x...:..---.:x....:.:----..x:...:.:................x....x.....:......:::.. 11M3D10M4I49M 54/70 77.1% 74/94230402 0.0% 7/70 10.0% 45007091 NA +3171 chr4 + 190214555 54182520 54182519 54182603 84 ATGACTTAAAATTCCCCCTTTTTGTCTTTACTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTTTCGCTC chr4 - 94230402 77850728 77850727 77850811 16379592 16379591 16379675 84 ATATCTGAAAATCCTTTGTGTTCTTCCCTTATTTCTCCTTCTTTCCTATTTTGTTTTTCATTTTTTGGGGACAAGGTTCTTCTC ..:x..x.....:.:::x.x..:x..::.xx.....::......:..x....x.....:x......x.:...:.:...::x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -23668208 -70562194 +3009 chr4 + 190214555 54192136 54192135 54192186 51 AAAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAACGAGGCTGAGGGCTG chr4 - 94230402 42895012 42895011 42895062 51335341 51335340 51335391 51 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTG ...:.:.......:.....:.........:.x...:x...:x....::... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 11297124 NA +3177 chr4 + 190214555 54199387 54199386 54199458 72 TCTTCAGGATATTTTTTTCTGTTTTTTCCTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTTTT chr4 - 94230402 8439370 8439369 8439441 85790962 85790961 85791033 72 TCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCT .....x..:.x.:.::::x....:.x.:..::....x.:::.:.:.::.....:..:.............:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 45760017 NA +3008 chr4 + 190214555 54200521 54200520 54200599 79 TCTCAAAACATATATA-----TATATATATATATATATATATATATATATATATATATATATATATACACACACATATATATAC chr4 - 94230402 17520729 17520728 17520812 76709591 76709590 76709674 84 TCTTAAAATGCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...:....:::..x:.-----:.x.......x.:.:.x...:.:...:..:.:x..::x.:....x.....::........... 16M5I63M 54/79 68.4% 84/94230402 0.0% 5/79 6.3% 36679792 NA +3296 chr4 + 190214555 54200532 54200531 54200601 70 ATATATATATATATATATATATATATATATATATATATATATATATATATACACACACATATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..:.::........x...:x.xx.:.x......:.....:...:.x.:.x...x.....:....x..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 30064339 NA +3491 chr4 + 190214555 54200542 54200541 54200624 83 ATATATATATATATATATATATATATATATATATATATATACACACACATATATATACACACACACACATATATATACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.::...x.:..:...x..:....:...:.x:...:xx...:.:.............x.:.:.x.::x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 45804754 NA +3101 chr4 + 190214555 54200552 54200551 54200620 69 ATATATATATATATATATATATATATATATACACACACATATATATACACACACACACATATATATACA chr4 - 94230402 24136193 24136192 24136261 70094142 70094141 70094210 69 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA ..:.::........x...:x.xx.:.x....:...:.:.:...:.x...x...x.....:....x.... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 30064359 NA +3062 chr4 + 190214555 54200557 54200556 54200623 67 TATATATATATATATATATATATATACACACACATATATATACACACACACACATATATATACATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:......:......x...:....:x.:..:::.x..:......:..:.:.::... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 6033519 NA +3015 chr4 + 190214555 54200563 54200562 54200617 55 TATATATATATATATATATACACACACATATATATACACACACACACATATATAT chr4 - 94230402 72800653 72800652 72800707 21429696 21429695 21429750 55 TGTTTACATATATATATATACACACACATATATAAACCAAAAGAAACGTTTATAT .:.x..:...........................x..xx.x.x.x..:.x..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -18600090 -75630312 +3018 chr4 + 190214555 54200570 54200569 54200610 41 ATATATATATATACACACACATATATATACACACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x..............:......:..:...x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 8928882 NA +3433 chr4 + 190214555 54214849 54214848 54214932 84 CTGCAACCTCTGCCTCCCAGGCTCAAGAGATTCTCATGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGTGTACACCGCCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGT ..:..:..:xx:x..:.::..:.....x.x...x..x.x........:.::.........:.:....x...--....:.::... 71M2D11M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 36017723 NA +9649 chr4 + 190214555 54227254 54227253 54227917 664 TCACACATGGAAACCTTTAGCAAATGTTTGTTAATGATCATAACAAAGGCATCATTCAAATTAGGCAGGTAATTACTACCAGAAGGACAACTGGGTGCTCGCTTGCTCATCCATTGCTTTCTGCTTTA-----AACTCCCGAGGAGTCGCTGCC-------------------TGGAGACACTCCCGCCCGGACTGCTTCTCGGGCCCCATTAAAC-----GGCTCTGAAATGAACTGTGAAGTTACCATTTGTGGGCGGAGAGCGCTGGGGCCCTGCGGACGGAAGACCCTGGCTTGACCGGACTAACAGTGTCGCCGAAGCAAAGCAGCCCCTCTGGGTAGGCTGTCTGT-CTCGCCTCCTACCCTCTGGGGCAACTAGCCTAAAAACCCGGTTCTCAACTTAACAGCATGTGGCCCAGCACCCGCTTTTGCCTTTTATTCCGCACTCTGATTTT-------TGGGGGGATCGTTTGTTCCCGCTCATTTTCTACAAACATTACGGTATCCTGTTAGCATTCCGAACAAGGGGCTGTTCATATATTTGCCTTCAATGATTTCCTGAAGGGACATGTGGAAGTAATAGCGAGCG-GTGCAGTCACCCAAGCTGAAGATGCACGAGAGCGGGTCGCGTAGAAGAACTGCGGCAATGGGACCCCCAGCGCAGCCCCAGG------CGCCCTGTTTTCGAGGCTGACATC chr4 - 94230402 26926559 26926558 26927168 67303235 67303234 67303844 610 TCCCACATGGAAACCGTTAACGAATGCTCGATAATGATCACGACAAAGGTATTATTCAAATGAGGCAGGTAATTGCAACCAGAA---------GGCGCCTTCTTCCCTTCCTTTTGCTCTTTCCTTTACCGAGAGCGCCCTTCGCATCGCATCCGATCCCGGCGATGCTCCATCGGGGATCGCCCCACCCGTACGGCCGCGGGGTCTCCGCGGGGCTCCCGGGCGCTG---CCCACGGCCGCATCCCCGCCGGTGCTCGAAGCCCTC-GGGGCTCCACGGATGG--GACTTTTCCTC--CTCAAATTCCAGGGTCG---------------------GGCT--GCTGCGTGTGTTCGCCCCC---------AGGCAGAGAATCT------CCGG------------------GTGTACCGG--TTTGTTTTTCTCCTTATTTTCCCCCTATGCTTTTGATTCACTCGCAGCGTTGTTTATTC-------------ACAAGCATTCCGGTATCCTGTTAGCATTCCGAGC-AGAAGCCGCTCGCAGATCCGACTCCGATGGTTTCCTGCAGAAACATGTGGAAGCAATAGCGGGGACGTGAGCTCCCCCAAGCAGGGGAAGCCCCGGAGCGCAGCGTGC-------CCGAGGC--CGGCACCCCTTGAGCCGCACCGGGGGGCTCGGCCCCGGCCTCGGCGCACACGTC ..x............x...:.:....:.:.x.........::.......:..:........x............:.x.......---------..:..::x...x.::x:.:x.....:.:.x.....-----.:.x...xxx.x:....xx..-------------------:..:..:xx:...:....x..x..:x.xx..x.:..::x:::.-----...x...---:xx..x.:x:x:.:x..:::x...xx..:..xx.x.-.....:.::....:..--...::.xx..:--.:x:.x.xx...x....---------------------..x.--....:x...-:.....:..---------:....:xx.::..------....------------------...xx..:.--:::.:....x:.:..xx..:.x.x..x..x....-------.x.x:.x:.:....:...-------------....:....x......................:.-..::..:.:..::.x..::.x..:.:...:.......x..::...........:.......:.x:-...x:x..x.......x.::..x..x.x:.....x:x..:.:-------.:.x...--:..x.....:x.x..x..x..:..------x....:.x::...:x..xx..:.. 84M9D35M5I21M19I43M5I7M3D36M1D16M2D11M2D17M21D4M2D9M1I9M9D13M6D4M18D9M2D34M7I18M13D34M1D65M1I42M7D7M2D24M6I24M 376/566 66.4% 610/94230402 0.0% 142/566 25.1% 27300695 NA +12932 chr4 + 190214555 54228983 54228982 54229446 464 GCAGAGCACCAACACCTCCCCCTTCCACCACCCCCCATC--CCATCTGGTCTGCTTCTCCCCGCCCCCCAGTTGTTGTCGAAGTCTGGGGGTTGGGACTGGACCCCCTGATTGCGTAAGAGCAAAAAGCGAAGGCGCAATCTGGACACTGGGAGATTCGGAGCGCAGGGAGTTTGAGAGAAACTTTTATTTTGAAGAGACCAAGGTTGAGGGGGGGCTTATTTCCTGACAGCTATTTACTTAGAGCAAATGATTAGTTTTAGAAGGATGGACTATAACATTGAATCAATTACAAAACGCGGTTTTTGAGCCCATTACTGTTGGAGCTACAGGGAGAGAAACAGAGGAGGAGACTGC-------AAGAGATCATTGGAGGCCGTGGGCACGCTCT-----TTACTCCATGTGTGGGACAT--TCATTGCGGAATAACATCGGAGGAGAAGGTAAGGGAAAAGAAAAAATG-----ATTTTTTGTTT chr4 - 94230402 26928010 26928009 26928459 67301944 67301943 67302393 450 GCAAAACGCTCACAT-TCCCCCTCCCTCCCCCTCGCCTCTGCCATATGG-CGGCCGC-CCCCTCCCCTGCGAGGCCGGGGAAGGCTGGAGGCTGAGGCTGT-CCCCCTGCCTGCGTAAGAGCC----------------Tccgcccgcgggg---ccgggggcgcgggccgagccggggcggcTCTTATTGTGAAGGGGCC------GGAGGGGGCTTCATTTCCTGACAGCTATTTACTTAAAGCAAATGATTAGTTTTGGAAGGATGGACTATAACATTGAATCAATTACGGGACGCGGGTTGTGAGACCATTGCAGTCGGAGCCGGAGGGAGGGCGAGCGGGAGGGAGCGCGCCTGAGCGGGGAGAGTCACAAAAGCCGTGGACATATTTTGGATATTTTACAATCTGCGGGACGGGATCTGCGCGTTATAA------AGGAGGAGGTAAGAGGTGAGGAGCAGTTTTCCCACCTTTTGTTT ...:.:.:.:x...:-.......:..x..x..:.x.x..--....x...-.x..:x.-....x....:xx.xx.::.xx....x....:..:..:.:...x-.......x:...........x----------------..:.xx.:.x...---::x..:....:..xx.xx:x:.:.x::..:.....x.....:.:..------.::.....x:.:.......................:.................:...............................:::......x..x....x.....:.x..:.....::x......:.x:.xx.:.::....xx:..-------::....x:xx:::.:.......:..:::.:.-----..x:x.x..x..:.....:x--..xx:...xx....------.....:.......:.:x:..:.:x.:.x-----.::........ 15M1D23M2I8M1D7M1D43M1D21M16D13M3D46M6D149M7I31M5I20M2I14M6D28M5I11M 299/429 69.7% 450/94230402 0.0% 56/429 13.1% 27300973 NA +3022 chr4 + 190214555 54236802 54236801 54236870 69 AAAAAAAGAAAAAGAAAGAAAGAAAAAAGAAAAAAAGAAAGTTCACAAACAGGCCTGATTTCTACCCAG chr4 - 94230402 78786699 78786698 78786767 15443636 15443635 15443704 69 AGGAAAAGAGAAAGAGAGGAAAATAAAAGAGAATAAGAAAGTTTCAAATGAAGTAATACTTCTATCCAG .::......:.....:..:..:.x......:..x.........:xx..xx.:.:xxx.:.....:.... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -24549897 -69680505 +4234 chr4 + 190214555 54253760 54253759 54253842 83 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTTTCCAGTAGCTGGAACTACAGGAGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.............x...x..x.x...........x................--x...::....::.. 67M2D14M 63/81 77.8% 81/94230402 0.0% 2/81 2.5% 36056634 NA +15855 chr4 + 190214555 54261080 54261079 54261421 342 TGCTTCCTTTTGCAGGGCTGAGCCTAATCCTCTGCCAGCTTTCATTACCCTCTATCCTTCCAAATGAAAATGAAAAGGTTGTGCAGCTGAATTCATCCTTTTCTCTGAGATGCTTTGGGGAGAGTGAAGTGAGCTGGCAGTACCCCATGTCTGAAGAAGAGAGCTCCGATGTGGAAATCAGAAATGAAGAAAACAACAGCGGCCTTTTTGTGACGGTCTTGGAAGTGAGCAGTGCCTCGGCGGCCCACACAGGGTTGTACACTTGCTATTACAACCACACTCAGACAGAAGAGAATGAGCTTGAAGGCAGGCACATTTACATCTATGTGCCAGGTGAGTTGG chr4 - 94230402 26936585 26936584 26936923 67293480 67293479 67293818 339 TGTGTCTTTTTCCAGGACCGCTCCTAACACTTTGCCAGCTTCCTCTGCCGACTATTGTTCCCAATAGAAATGAGATGGTTGTACAGCTGAATTCCAATTTCACACTCAAATGCTCTGGAGACAGCGAAGTGAGCTGGCAGTACCCGGTGACCGAGGGA---AGCCACAGGATAGACATCAGACACGAGGAGAACAACAGTGGCCTCTTCATGACAGTGCTTGAAGTCGGAAATGCCTCAGCCGCTCACACGGGCATGTATGTTTGCTATTATAACCACACGCAAGTGGAGGATGGGGAAGTCGAGGGGAAGGACATCTACATCTATGTGCCTGGTAAGTGGG ..:x..:....x....:.:.xx.....:x..:.........:.x:.:..xx....:x....x...::......:.x......:...........xxx:..:x.x..x.:.....:...:..x..:....................x:..x.:..:.:.---...:x.::x:.:..x......x.:..:..:........:.....:..::....:..x:.x.....x:.x.:......:..x..:.....:..xx....:::.........:........x..::::..:..x::x..:x.:..:..x.:.x....:..............x...:...x.. 158M3D181M 240/339 70.8% 339/94230402 0.0% 3/339 0.9% 27324495 NA +3071 chr4 + 190214555 54261895 54261894 54261945 51 TTACATATATATATATATATATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 92735347 92735346 92735397 1495006 1495005 1495056 51 TTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT ..:.....x.....:...:..:.:..........x.x..:.x......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -38473452 -55756950 +7102 chr4 + 190214555 54264902 54264901 54265055 154 TTTGTTCTTTTTTATAGCAACATCAGAGCTGGATCTAGAAATGGAAGCTCTTAAAACCGTGTATAAGTCAGGGGAAACGATTGTGGTCACCTGTGCTGTTTTTAACAATGAGGTGGTTGACCTTCAATGGACTTACCCTGGAGAAGTGGTAGGT chr4 - 94230402 26940157 26940156 26940310 67290093 67290092 67290246 154 TCTCTCTCTTCTCTTAGCTACTTCACAGCTGCCGGTTGAAATTGAAGCTCTGAAAACTGTCTACAAAACAGGCGAGACCATCGTAGTAACTTGTGTGGTCTTTGACAATGAGGTGGTTAATTTACAGTGGAATTATCCTGGGAAAGTGGTAAAT .:.x.:::..:.:x....x..x...x.....xxxx.x.....x........x.....:..x..:..:x....x..:..x..:..:..x..:....:x..:...:..............:.::.x..:....x...:.....::........::. 154M 109/154 70.8% 154/94230402 0.0% 0/154 0.0% 27324745 NA +18829 chr4 + 190214555 54267267 54267266 54267754 488 TTTTCTTCCCCTTTT----GCTGTAGAAAGGCAAAGGCATCACAATGCTGGAAGAAATCAAAGTCCCATCCATCAAATTGGTGTACACTTTGACGGTCCCCGAGGCCACGGTGAAAGACAGTGGAGATTACGAATGTGCTGCCCGCCAGGCTACCAGGGAGGTCAAAGAAATGAAGAAAGTCACTATTTCTGTCCATGGTACATTCCGCTTTCTAAAATGTC----AGTTGTCCATGCTGCTCGGGATCCAT-----------ATGTGGTA-ATCATTATTTAATGGAAACTCTTCCCTGTACAGAGAAAGGTTTCATTGAAATCAAACCCACCTTCAGCCAGTTGGAAGCTGTCAACCTGCATGAAGTCAAACATTTTGTTGTAGAGGTGCGGGCCTACCCACCTCCCAGGATATCCTGGCTGAAAAACAATCTGACTCTGATTGAAAATCTCACTGAGATCACCACTGATGTGGAAAAGATTCAGGAAATAAGGTAAAGAAACTCT chr4 - 94230402 26941662 26941661 26942165 67288238 67288237 67288741 504 TTTTTTTTTCCTTCTCCAAACTACAGAAAGAAAAAGGTCTGATAAAACTTGATGATATCAAAGTCCCATCACAGAAGTTGGTTTACACGTTGACCATACCTGACGCATCAGTGAAAGACACAGGGGATTATGAATGTACTGCCCGACATGCAACCAAGGAGGTTAAGGAAAATAAGAAAGTAGTCATTACAGTTCATGGTATAGTCTGATTTC---AGTGTCCAAAAATTATTAATG-TGTTGGAAAACACTCTTCTTGAAAAATGCTGCGCAGCATTGTTCATGCATGGCTTTTTCATTTACAGACAAAGGGTTCATTCATCTAGAGCCTCAATTTAGCCCTTTGGAAGCTGTCAATCTACATGAAGTCAAAAATTTTGTCGTCGATGTGCAGGCGTACCCCGCTCCAAAAATGTACTGGTTGAAGGATAATGTGACTCTGATTGAAAACCTTACTGAGATTGTTACTAGTTCAAACAGAGTCCAGGAAACACGGTAAAAATACTCT ....:..::....:.----:..::......:x.....:x.x.:..x:..x..x..x..............xxxx..:.....x.....x.....x:.x..:..x..xx.:..........xx..:.....:......:.......x..x..x....:......:..:....xx........x:::...x.x..:.......:.x..:.x....---.:....----.:..:.:x...-..:.x.::.x.xx.-----------...:x.::-.x....:..:.xxx:x::..:..:.x.x......x.....x......x.xx.x:.:..:xxx..:....xx..............:..:............x.......:..x..x....:...x.....xx....x.::..:.x....:....::.:...x................:..:........::::...::.x:::.x.:::.:.......:.x......:.x..... 15M4I194M3D6M4I11M1D14M11I8M1I236M 341/484 70.5% 504/94230402 0.0% 24/484 5.0% 27325605 NA +6217 chr4 + 190214555 54270610 54270609 54270751 142 AAACAAAATCCTTTTTTTAAAAGGTATCGAAGCAAATTAAAGCTGATCCGTGCTAAGGAAGAAGACAGTGGCCATTATACTATTGTAGCTCAAAATGAAGATGCTGTGAAGAGCTATACTTTTGAACTGTTAACTCAAGGTA chr4 - 94230402 26942651 26942650 26942792 67287611 67287610 67287752 142 AACCAGAACTGTCATTTCTGCAGGTTTCAAAGTGTACTAAAATTGATCCGGGCCAAGGAAGAAGACAGTGGGTACTATACTTTGGTTGCTGAAAATGAAGATGAGATTAAGAGATACACCTTCTCGTTGCTAATACAAGGTA ..x..:..::x.:x...:x:x....x..:...::x.:....::.......x..:.................x:.:......x.x..x...x............xx:.x.....x..:..:..:xx::..:...:x....... 142M 99/142 69.7% 142/94230402 0.0% 0/142 0.0% 27327959 NA +3294 chr4 + 190214555 54271606 54271605 54271677 72 CTTTCCTTTCTCTCCTTCCTTCCCTCTTCCCTTTTTCCTTTCTCTCCTTCCTTCCTTCCTTGCTTCCTTCTT chr4 - 94230402 20485614 20485613 20485685 73744718 73744717 73744789 72 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTT ...x.:..:.x.:...x..::x..:.::.......:..:..:....:....::::.:....x...::.:... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 33785992 NA +3318 chr4 + 190214555 54271615 54271614 54271701 87 CTCTCCTTCCTTCCCTCTTCCCTTTTTCCTTTCTCTCCTTCCTTCCTTCCTTGCTTCCTTCTTCCCTCCC---TCCTTTGTTCTCTCTTT chr4 - 94230402 93339646 93339645 93339735 890668 890667 890757 90 CTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCT .......:.x.:x.....xx::.:.::.:x:x.....:..:..:.x.:.x:.x.........x.......---....:..::.:....:. 70M3I17M 58/87 66.7% 90/94230402 0.0% 3/87 3.4% -39068031 -55162371 +4472 chr4 + 190214555 54271627 54271626 54271773 147 CCCTCTTCCCTTTT-TCCTTTCTCTCCTTCCTTCCTTCCTTGCTTCCTTCTTCCCTCCCTCCTTTGTTCTCTCTTTTCCTTTCCT-----TTCTCTTTTTCTTTCCTTCCTTCCTTCCTCACTCACTCTTTTCTTTTCCTTTCTCTCCTTCCT chr4 - 94230402 19119059 19119058 19119211 75111192 75111191 75111344 153 CCATCTTCcttctccttctctttcttgttgttctctttgttgttgttgttcttcttcttctccttgctctccttgttctACTATTAGTAGTTTTCTCTTTCTTTGACACCTCCCTTACACCCCCATCCTTCTCTTTGTCTTTCTCTCTCTCCT ..x......:.:.:-.:..:.:...:x..x:.::...:x...:.x::x.::.:.:..::::.:...:....::.x...:x:.x:.-----..:...:.......xx:x...:....x.x.x.:..::...:.....x:.........::.... 14M1I70M5I63M 91/147 61.9% 153/94230402 0.0% 6/147 4.1% 35152568 NA +3031 chr4 + 190214555 54271669 54271668 54271724 56 TTCCTTCTTCCCTCCCTCCTTTGTTCTCTCTTTTCCTTTCCTTTCTCTTTTTCTTT chr4 - 94230402 35176013 35176012 35176068 59054335 59054334 59054390 56 TTTGTTTTTCCCTTCATTCTCTATCTGCTTTTCTCCTTTCCTTTCTCTATTTCTCT ..:x..:......:.x.:..:.:.::x..:..:...............x.....:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 19095656 NA +4601 chr4 + 190214555 54271768 54271767 54271984 217 CTTCCTTCCTTCCTTCCTCCCTCCCTCACTCTCTCTTTTCTTTGCC-------TTTCTCT---CCTTCCTTCCTTCCTTTTCCTCCCTCCCTCCCTCCCTTGTTCTCCCTTTTCCTTCCTTCC---TTCTTTCCTTTCTTCCTTCCTTCCCTCTTCCCTCACTCTCTCTTTTCCTTTCTCTCCTTCCTTCCTTCCTTCATT----------CTCCCCTCCCCTCCCCCCTCCCCTCCCCC chr4 - 94230402 59424941 59424940 59425163 34805240 34805239 34805462 223 CTGTTTTCCT--CTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATC-------------TTTCCCCACTCCCAGCCCTTC--TCCTTCATTAAAGCTGTCACAGCCAGCTTCTCCCTCCTGCTTCCGCCC ..x::.....--..x...:.:.......:.:.............x.-------....:.:---::..x......:.:..x....x:.:.:x.x.:.::...x.:x.x.:..x..x...x.x..---..:..:x.x..:..::....:.:....x..-------------.....::x...:.xx:.....--.........----------.xx..xx.::.....:...x.:::.x... 10M2D34M7I7M3I60M3I30M13D21M2D9M10I29M 136/200 68.0% 223/94230402 0.0% 40/200 20.0% -5153173 -89077229 +3014 chr4 + 190214555 54271825 54271824 54271912 88 CCTTCCTTCCTTTTCCTCCCTCCCTCCCTCCCTTGTTCTCCCTTTTCCTTCCTTCCTTCTTTCCTTTCTTCCTTCCTTCCCTCTTCCC chr4 - 94230402 23891361 23891360 23891448 70338955 70338954 70339042 88 CCTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCC ...:..xx::x:..:.x.:.....:x..:.x.:xx::.:...x:::..:::...:..:..:..x......:...::..:..:...... 88M 52/88 59.1% 88/94230402 0.0% 0/88 0.0% 30380464 NA +3008 chr4 + 190214555 54271940 54271939 54272011 72 CCTTCCTTCCTTCATTCTCCCCTCCCCTCCCCCCTCCCCTCCCCCTCCCCTCCCCCCTCCCCCCCTCCCCTC chr4 - 94230402 83554911 83554910 83554982 10675421 10675420 10675492 72 CCTACCTTGACTCATACTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC ...x....xx:....x...x::..::.........x..::........::::::..:.:.:.:.:..::.:. 72M 45/72 62.5% 72/94230402 0.0% 0/72 0.0% -29282971 -64947431 +7962 chr4 + 190214555 54272368 54272367 54272544 177 TTCTGACTTCTTTCTGCCTCTTGCAGTTCCTTCATCCATTCTGGACTTGGTCGATGATCACCATGGCTCAACTGGGGGACAGACGGTGAGGTGCACAGCTGAAGGCACGCCGCTTCCTGATATTGAGTGGATGATATGCAAAGATATTAAGAAGTATGGAAAACAGATGTGTCTTCT chr4 - 94230402 26943267 26943266 26943434 67286969 67286968 67287136 168 TCCTGACTCCTTTC---------CAGTTCCAGCCTTGATCTTAGACCTCATGGACGACCACCAAGGCTCTGCTGGCAGGCAGACGGTGAGGTGCTTGGCTGAAGGTACCCCGCTTCCTGATGTGGAATGGTTGGTTTGCAAGGACATTAAAAAGTAAGAAGAGGAGCTTTGTTGTCT .:......:.....---------.......xx.x.:x..::.:...:.x:.x..:..:.....x.....x:....x:.:...............x::........:..x............:.x..:...x..:.x.....:..:.....:.....x.:.:.:x..x.x...:x... 14M9D154M 123/168 73.2% 168/94230402 0.0% 9/168 5.4% 27329101 NA +9564 chr4 + 190214555 54273524 54273523 54273737 214 TTTTTCTCTCTAGATGTAATAATGAAACTTCCTGGACTATTTTGGCCAACAATGTCTCAAACATCATCACGGAGATCCACTCCCGAGACAGGAGTACCGTGGAGGGCCGTGTGACTTTCGCCAAAGTGGAGGAGACCATCGCCGTGCGATGCCTGGCTAAGAATCTCCTTGGAGCTGAGAACCGAGAGCTGAAGCTGGTGGCTCCCAGTGAGTT chr4 - 94230402 26944352 26944351 26944565 67285838 67285837 67286051 214 TTACTCTCTGCAGATGCAGCAATGACACTTCCTGGACTCTTCTGACTAACAACATCTCTGATATACACATGGAAGCCCACCTGGATGAGAGGAATATGGTGGAAAGCCAGGTGACCTTCCAGAAGGTAGAAGAAACCCTGGCTGTGAGATGTGTAGCAAGAAATGACCTTGGAGCTGTTACTCGGGAACTGAAACTTGTGGCTCCCAGTGAGTT ..x:.....x:.....:.::.....x............x..:..:.:.....::....x:.:..xxx..:...:::....::xx:x..x....:..:x.....::...:x.....:...xxx..:..:..:..:...x.x..:...x....:x.:..x.::...xx...........xx.x:..:..:.....:..x................. 214M 148/214 69.2% 214/94230402 0.0% 0/214 0.0% 27329172 NA +13975 chr4 + 190214555 54274509 54274508 54274982 474 GCCTCTCTCTCTTGTCACGTAGCCCTGCGTTCTGAACTCACGGTGGCTGCTGCAGTCCTGGTGCTGTTGGTGATTGTGATCATCTCACTTATTGTCCTGGTTGTCATTTGGAAACAGGTAGATATTTTCTCATAAAACTAAAGATCTTTGAAGCCAATGAGAACAAGCATAGCAACCTAGTTCAGTGCTTGGCACAGAGAAGGAGCTCAGCAATTACATGTGGAGTGAACGTTGTTGGACTCTACTGTGTCCAGTCACTGTGCTGCTTCAGTGAAGCTCTGGTGCACTGGGACTTTGG--TAATTCACCAGTTACCTGTCCTGGTCATTTATAGAAACCGAGGTATGAAATTCGCTGGAGGGTCATTGAATCAATCAGCCCAGATGGACATGAATATATTTATGTGGACCCGATGCAGCTGCCTTATGACTCAAGATGGGAGTTTCCAAGAGATGGACTAGTGCTTGGTAAGTTCC chr4 - 94230402 26944959 26944958 26945317 67285086 67285085 67285444 359 GCCTGTCTTTTTACTC-CACAGCCTTGCGATCAGAACTGACGGTGGCTGCTGCTGTCTTAGTACTGCTGGTGATTGTGATAATTTCACTGATTGTCCTGGTCATCATCTGGAAACAGGTA---ATTT------------------------------------------------------------------AGAAAGAAGTATTTCAGT--TTGGATGC----TGAGCCCCGTTGGGTTTTG--ATCTCAAGTC---------------------------------GGACATAAGACTAAT-----GATTACAT-TCAATATGCTTTGCAGAAGCCAAGGTATGAGATAAGATGGAGAGTCATTGAGTCTATCAGCCCCGATGGCCATGAATACATTTATGTGGACCCAATGCAGCTACCTTATGACTCCAGATGGGAGTTTCCTCGAGATGGGCTAGTGCTTGGTAAGTTTC ....x...:.:.xx..-.::....:....x..x.....x..............x...:.:..:...:.............x..:.....x...........::....:............---....------------------------------------------------------------------.x.:.....x.x:....:--..:x...:----...:.x::.....::.:.:--:.x..x....---------------------------------....x.x:.--....-----::....x.-..xxx:.xx...::....:..:........:..xx.x.....:........:..x........x.....x........:..............:........:...........x..............xx.......:.................:. 16M1D103M3D4M66D18M2D8M4D19M2D10M33D9M2I4M5D8M1D158M 282/357 79.0% 359/94230402 0.0% 119/357 33.3% 27329550 NA +5708 chr4 + 190214555 54274831 54274830 54274980 150 TCATTTATAGAAACCGAGGTATGAAATTCGCTGGAGGGTCATTGAATCAATCAGCCCAGATGGACATGAATATATTTATGTGGACCCGATGCAGCTGCCTTATGACTCAAGATGGGAGTTTCCAAGAGATGGACTAGTGCTTGGTAAGTT chr4 - 94230402 27074992 27074991 27075135 67155268 67155267 67155411 144 TCCTTCCCAGAAACCCAAATATGAAGTCCAGTGGAAAGTTGTTGAAGAAAT------AAATGGAAACAACTATGTTTACATAGACCCAACGCAACTTCCTTATGATCACAAATGGGAGTTTCCTAGAAACCGGTTGAGTTTTGGTTAGTT ..x..:x:.......x.::......:.:.:x....::..::.....xx...------.:.....x.::.x...:....::.:.....:.:...:..x........::xx.:............x...:.:x.::.::xx:.....x.... 51M6D93M 97/144 67.4% 144/94230402 0.0% 6/144 4.2% 27199839 NA +7441 chr4 + 190214555 54277385 54277384 54277498 114 CAGGTCGGGTCTTGGGGTCTGGAGCGTTTGGGAAGGTGGTTGAAGGAACAGCCTATGGATTAAGCCGGTCCCAACCTGTCATGAAAGTTGCAGTGAAGATGCTAAAACGTAAGT chr4 - 94230402 26949304 26949303 26949417 67280986 67280985 67281099 114 CAGGTCGAATCCTTGGTTCTGGTGCATTTGGAAAAGTGGTGGAAGGGACAGCATATGGATTGAGTCGTTCTCAACCTGTGATGAAAGTAGCCGTGAAAATGCTGAAACGTAAGT .......::..:.x..x.....x..:.....:..:.....x.....:.....x........:..:..x..:........x........x..x.....:.....:.......... 114M 93/114 81.6% 114/94230402 0.0% 0/114 0.0% 27328081 NA +4743 chr4 + 190214555 54277386 54277385 54277499 114 AGGTCGGGTCTTGGGGTCTGGAGCGTTTGGGAAGGTGGTTGAAGGAACAGCCTATGGATTAAGCCGGTCCCAACCTGTCATGAAAGTTGCAGTGAAGATGCTAAAACGTAAGTG chr4 - 94230402 27075376 27075375 27075489 67154914 67154913 67155027 114 AGGTAAAACCCTTGGTGCTGGAGCTTTTGGAAAGGTTGTTGAAGCCACTGCTTATGGCCTATTTAAATCTGATGCCGCTATGACAGTAGCAGTGAAAATGTTGAAACGTAAGTG ....x::::.:.x..xx.......x.....:.....x.......xx..x..:.....x:..xx:x::..:x.xx.:.::....x...x........:...:.:........... 114M 78/114 68.4% 114/94230402 0.0% 0/114 0.0% 27202010 NA +16391 chr4 + 190214555 54277878 54277877 54278531 654 GATTTATTCTTTCAACAGCCACGGCCAGATCCAGTGAAAAACAAGCTCTCATGTCTGAACTGAAGATAATGACTCACCTGGGGCCACATTTGAACATTGTAAACTTGCTGGGAGCCTGCACCAAGTCAGGTGGGCTCA-CTGACCTGGAGTGAGGATTTTCACTGGACACATGTGGTTGTGAAAACTGTTCAATCAGGCTTAAATCCTCCACTCTCCATCCCCACACATGGCAG--GGAATAGAAGTC--CCTTGAATGGAGCTGACTGGTCCCTTGAATTGATGGAAGCTCATTGGTTTTTGAGCAAAATCTGTTGCCAGTCCAGTCATAGCCATTCATGGCTCTTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTT---TTGGTATCTTATTTTTTTCTGTGCCATATGGTCTGCAGGACAATTCATGGCTTTTCTGTTCTTCATTTTCATACCCATCTCCTAACGGCTTTTGTCCCCATAGGCCCCATTTACATCATCACAGAGTATTGCTTCTATGGAGATTTGGTCAACTATTTGCATAAGAATAGGGATAGCTTCCTGAGCCACCACCCAGAGAAGCCAAAGAAAGAGCTGGATATCTTTGGATTGAACCCTGCTGATGAAAGCACACGGAGGTGGGTGCAAAGAGAG chr4 - 94230402 26950114 26950113 26950656 67279747 67279746 67280289 543 GGTGTGCTTTTTCAACAGCTACAGCTAGATCCAGCGAAAAACAGGCGCTCATGTCTGAACTGAAGATAATGACACATCTTGGGCCCCACCTGAATATTGTGAACCTGCTTGGAGCTTGTACGAAATCAGGTGGGTTTGGCTGA---------------TTAAATGGAAGCTTGTTGTGG----AGCTGTC-------------ATTCACTGTTTAACAATCACACATATATCAGATGTGATTGACCTTAACATTAAATATAAATAAATA------TGAGATTTCACAAGCCTACTTGTTATTTGGCAGTAGTTA---------CAGTCATAAC----------------TTAATAAACTGAAATGTATTAACTCCTAGTAATCTTCATGTTGGGAGCTGTCATTTTT-------------------GAAAGATGCGTTATTTTGCTTTATTTCATC----------------------------------AGGTCCTATTTACATAATCACTGAATACTGCTTTTACGGTGATTTGGTGAACTATCTGCACAAGAACAGGGACAACTTCCTCAGCCGACATCCAGAGAAACCAAAGAAAGATCTGGATATTTTTGGGATGAACCCAGCTGATGAAAGCACAAGAAGGTGGG---AAAGAGGG .:.x.::.:..........:..:..:........:........:..x..........................x..:..x.....x..::....:.....:...:....x.....:..:..x..:.........:.::-....---------------..x.x....x:.x...x..x.----.:....:-------------..:.x.:::.:xx..x:.x....:..:x...--.x:..x..xx.:--.x..:...:x.:x.:.x.:------...:x.xx::x....::.:.x...x..x:...:x.x:.:---------........:.----------------....x...xx:...x:x.xx..xxxxx.:x..::..:---....x.x..xx:x.....-------------------.:.x:..x.:.x::...x..x.x:.....:----------------------------------...:..:........x.....x..:..:.....:..:..x........x......:....:.....:.....:.:......x....:x..:........:...........x........:.....:x.......x...............x.:.......---......:. 138M1I4M15D21M4D7M13D31M2I12M2I19M6D39M9D10M16D37M3I18M19D30M34D161M3D8M 383/535 71.6% 543/94230402 0.0% 127/535 23.7% 27327764 NA +3014 chr4 + 190214555 54278224 54278223 54278277 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTTTGGTATCTTATTTTTTTC chr4 - 94230402 39660444 39660443 39660497 54569906 54569905 54569959 54 AAAGAAAAAAAAAGGAATAAAAAAAAAAAACATACCTGGCATCTTATGTCCCTC ...:.........::..x.............x.x::...:.......x.:::.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 14617780 NA +11630 chr4 + 190214555 54280294 54280293 54280486 193 ATTTCTCTTTCTGTTT--TTACAGCTATGTTATTTTATCTTTTGAAAACAATGGTGACTACATGGACATGAAGCAGGCTGATACTACACAGTATGTCCCCATGCTAGAAAGGAAAGAGGTTTCTAAATATTCCGACATCCAGAGATCACTCTATGATCGTCCAGCCTCATATAAGAAGAAATCTATGTTAGGTAA chr4 - 94230402 26951967 26951966 26952161 67278242 67278241 67278436 195 ATTTTTTATTCTTTTTAATTTCAGCTATGTGATTTTATCATTTGAAAACACCGGAGAATATATGGATATGAAACAAGCTGATACCACTCAGTATGTGCCAATGCTGGAAAGGAAGGAGGGATCTAAATACTCTGATATTCAGAGATCTGTATATGATCGACCTGCTTCATATAAGAAGAAATCTTTGTCAGGTAA ....:.:x....x...--..x.........x........x..........x:..x..x..:.....:.....:..:........:..x........x..x.....:........:....xx........:..:..:..:........xx.x........x..x..:..................x...:...... 16M2I177M 158/193 81.9% 195/94230402 0.0% 2/193 1.0% 27328327 NA +11976 chr4 + 190214555 54285339 54285338 54285969 631 CAGCACCAAT--ACATTTAATTTC------TTTTCTGCAGACTCAGAAGTCAAAAACCTCCTTTCAGATGATAACTCAGAAGGCCTTACTTTATTGGATTTGTTGAGCTTCACCTATCAAGTTGCCCGAGGAATGGAGTTTTTGGCTTCAAAAAATGTAAGTTCAAGGAACA-----------------------CAGACCTTTTTAGACCCAGATTTCAGTGAGTGGAGTGTGGACGGAGATGCTAGGAGATAGATGTTGGAAA----GGCCATTAATAACAGGGGCCTCTTA-CTTACCTG------------------------------------------TCTCTCTCCTTCATCCCCTACGC--------AGGTCAGGG----------------------------AGTCTGAA----------------------------------------------ATCAT-----------------------CAGGCATC-------TACTCTT----------------CTCTAGAGCTTTCT--------------------------CTCTGTTGGGAGTGGGTGGAGTGAGAACCTGGG----AGAAGGCCAGCCCTTTA------TATCCAGGCAGACAGC----TCCAAGTGCCACCATGGATCAGCCAGTCTTGCAGGGGTGATGCTATTCAGCTACAGATGGCTTGATCCTGAGTCATTTCTTCCTTTTCCATGCAGTGTGTCCACCGTGATCTGGCTGCTCGCAACGTCCTCCTGGCACAAGGAAAAATTGTGAAGATCTGTGACTTTGGCCTGGCCAGAGACATCATGCATGATTCGAACTATGTGTCGAAAGGCAGTGTACGT chr4 - 94230402 26953233 26953232 26954095 67276308 67276307 67277170 863 CAGCACAAATGTATATCTACTTTTCTCTCTTTTTCAATAGAATCAGAAGTAAAAAACCTTCTTTCAGATGACGGTTCGGAGGGTCTAAGCCTACTGGATTTGCTAAGCTTCACCTACCAGGTTGCACGGGGAATGGAATTCTTGGCTTCTAAAAATGTAAGTAAATAAAACAGTAAGTAAAAATGCAAGAAATGTCCAAATGTCTCAACTATGGGTTTCAGTT--TAGATTCTGAAAACAAATACAATATAACCATGATTTGGGATTCTAGCCATTTTTAACTTACCATTTTTAACTTACCTGGAAACTGAAATTGCCATGATTTGAGAAATCAAAGCAGCATGCTCTTCCTCATTTGCAGCCTATGTCATTGGTAAAGTCAGGGTCCTAGATCCAGTGGTGGATCTTGACAGGGTCTGGGTGGAGGATCCATCCAAGCACAGGCCAGTGTGGTACAAGCACAAACTATCATAAGCACACCATGGGTGGAGAGGACAGGCATCACTTTTACACCCTTTCCACTGTTGTAAATGCACGAGGCCCCTCTGTTTCTGAGGAATCATGCCTCCCTGACTCTGTT---AGTGGGCAGTATTGGTGCCTGTGCAGTAGAAGAAGGGCTTGTTAAGACTTTGCCCAGAAAGCCAACATGATCTGGGTGTTTTCAGAGAGC------TCTGGAAGTGAAACAGCCCTCCAGGAAT---TAGCACGTCCTTGAAAGACTTAATTTCTCTCCATGCAGTGCGTACACCGTGACTTGGCAGCTCGTAATGTCCTTCTGGCTCAAGGCAAAATCGTGAAGATCTGCGACTTTGGGTTGGCTAGAGACATCATGCATGATTCCAACTATGTCTCCAAGGGCAGCGTATGT ......x...--.:..:..x...:------.....x::...x........x........:...........::::..:..:..:..x.x::..:........:.:...........:..:.....x..:........:..:........x............xx.x::....-----------------------.x:.x:x.:.:.:x:x::.:.......x--.:..x.x..:.x:x.:..:.x.x:x:.:x:xx:..x.::.----:......xx....xx:xxx:.:...-........------------------------------------------...::...x..:::xx....:.:--------.:.......----------------------------:.....::----------------------------------------------.....-----------------------........-------:..:...----------------.x.x..:x.::...--------------------------.......---......::.x:.x:.x:....x.----.....:xx:..::x...------.::....:x..x..:.----..:::...::x:..x:..x.------...x.x..x.:x:xx..:x.:...xx.:---.:..x:.x:.:...:xx.:..xx.:::.:...........:..x........::....x.....:..:.....:.....x.....x.....:...........:........x:....:....................x........x..x..:.....:...:.. 10M2I12M6I142M23I28M2D40M4I25M1I8M42I23M8I9M28I8M46I5M23I8M7I7M16I14M26I7M3D23M4I17M6I16M4I20M6D28M3D167M 426/617 69.0% 863/94230402 0.0% 260/617 42.1% 27332106 NA +3278 chr4 + 190214555 54285427 54285426 54285495 69 GATTTGTTGAGCTTCACCTATCAAGTTGCCCGAGGAATGGAGTTTTTGGCTTCAAAAAATGTAAGTTCA chr4 - 94230402 27079743 27079742 27079811 67150592 67150591 67150660 69 GATCTATTAAGCTTCTCTTACCAGGTGGCAAAGGGCATGAGCTTCCTGGCCTCTAAAAACGTAAGTTCA ...:.:..:......x.:..:..:..x..xx::..x...::x..::....:..x.....:......... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 27205684 NA +5730 chr4 + 190214555 54285818 54285817 54285969 152 TCATTTCTTCCTTTTCCATGCAGTGTGTCCACCGTGATCTGGCTGCTCGCAACGTCCTCCTGGCACAAGGAAAAATTGTGAAGATCTGTGACTTTGGCCTGGCCAGAGACATCATGCATGATTCGAACTATGTGTCGAAAGGCAGTGTACGT chr4 - 94230402 27082638 27082637 27082789 67147614 67147613 67147765 152 TTGTTTGTCTGTTTGTTACGTAGTGCATTCATAGGGATCTGGCAGCAAGAAATATTCTTCTCACTCATGGTCGAATAACAAAAATCTGTGACTTTGGTCTGGCAAGAGATATAAGGAATGACTCAAATTACGTGGTTAAAGGAAATGTAAGT .::...x.::x...x::.:.:....::.:..:x.x........x..xx.x..::.:..:..x:.x..x..xx:...x:::..:..............:.....x.....:..x.x.x....:..:..:..:...x:x.....x.:....x.. 152M 99/152 65.1% 152/94230402 0.0% 0/152 0.0% 27203180 NA +8730 chr4 + 190214555 54287417 54287416 54287546 130 TCCTTCCT--TGCAGACCTTTCTGCCCGTGAAGTGGATGGCTCCTGAGAGCATCTTTGACAACCTCTACACCACACTGAGTGATGTCTGGTCTTATGGCATTCTGCTCTGGGAGATCTTTTCCCTTGGTATG chr4 - 94230402 26954666 26954665 26954797 67275606 67275605 67275737 132 TTCTTTCTGCTACAGACCTTCCTCCCAGTAAAATGGATGGCACCTGAAAGCATTTTTGACAATCTGTACACAACATTAAGTGATGTCTGGTCTTATGGCATTCTGCTGTGGGAAATATTTTCTCTTGGTATG .:...:..--.:........:..x..x..:..:........x.....:.....:........:..x.....x...:.:.............................x.....:..x.....:......... 8M2I122M 110/130 84.6% 132/94230402 0.0% 2/130 1.5% 27332751 NA +6089 chr4 + 190214555 54287439 54287438 54287544 106 CCCGTGAAGTGGATGGCTCCTGAGAGCATCTTTGACAACCTCTACACCACACTGAGTGATGTCTGGTCTTATGGCATTCTGCTCTGGGAGATCTTTTCCCTTGGTA chr4 - 94230402 27085406 27085405 27085511 67144892 67144891 67144997 106 CCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGCGTTTACACCTTCGAGAGTGATGTCTGGTCTTATGGAATATTGCTTTGGGAACTCTTCTCCTTAGGTA ..:..............x.....:.....:..::..x:.x.:......x:xxx.....................x..x:....:.....:x....:...:.x.... 106M 82/106 77.4% 106/94230402 0.0% 0/106 0.0% 27202033 NA +13910 chr4 + 190214555 54288774 54288773 54289120 347 TGGTGTTTTATTGTTTGGCTTT-----TAGGTGGCACCCCTTACCCCGGCATGATGGTGGATTCTACTTTCTACAATAAGATCAAGAGTGGGTACCGGATGGCCAAGCCTGACCACGCTACCAGTGAAGTGTGAGCTC--------CTTCCCCATCCCGGG--GGCCTGTGTTCA---CAGTCTGTGGGTCTAGGGGGAGGGAGGGGCCCTGAGA-CTTCCCCCTGTGCCCACTC-------TTGAGTTCTGTCC---CCACAGCTACGAGATCATGGTGAAATGCTGGAACAGTGAGCCGGAGAAGAGACCCTCCTTTTACCACCTGAGTGAGATTGTGGAGAATCTGCTGCCTGGACAATATAAAAAGGTGTGT chr4 - 94230402 26956707 26956706 26957068 67273335 67273334 67273696 362 tagtatttttttCTTCTGTTTTATCTGCAGGTGGCACACCATATCCTGGCATGATGGTCGACTCCACCTTCTACAATAAGATAAAGAGTGGCTACCGAATGGCAAAACCTGATCATGCTACCAATGAAGTGTACGTGTGTATTTGGCTTTCCCATGCCTGACTAGCCTCTGGACAATTTTGGCTTTTGTTTTTG--------------CCTGATAGCTTGTTTTCCTTCCCAGTTGATTAAATTGTTTTCCGTCTTATCTGTAGGTATGAGATCATGGTAAAGTGCTGGAACAGTGAACCAGAGAAAAGACCTTCGTTTTACCATCTGAGTGAAATTGTGGAGAGCTTGTTGCCTGGAGAGTACAAAAAGGTCTGT .:..:....x..x..:x.:...-----:.........x..x..:..:...........x..:..:..:..............x........x.....:.....x..:.....:..:.......:........:x.:x:--------...:.....x..x.:--:....x..xx..---:x.x..x.x.x.:.x.--------------.....x.-...x:::::x.x....x.:-------...xx...:...:---.:::..x..:...........:..:..............:..:.....:.....:..x........:........:..........:::..:........x.:..:........x... 22M5I111M8I15M2I12M3I16M14D7M1I19M7I13M3I118M 251/333 75.4% 362/94230402 0.0% 43/333 12.9% 27332067 NA +16177 chr4 + 190214555 54290268 54290267 54290558 291 TTGGTTGTTAACACTTGATTAAATATGTTCAATGAATGTTTATAGAGTTATGAAAAAATTCACCTGGACTTCCTGAAGAGTGACCATCCTGCTGTGGCACGCATGCGTGTGGACTCAGACAATGCATACATTGGTGTCACCTACAAAAACGAGGAAGACAAGCTGAAGGACTGGGAGGGTGGTCTGGATGAGCAGAGACTGAGCGCTGACAGTGGCTACATCATTCCTCTGCCTGACATTGACCCTGTCCCTGAGGAGGAGGACCTGGGCAAGAGGAACAGACACAGGTAG chr4 - 94230402 26957700 26957699 26957984 67272419 67272418 67272703 285 TTAGTGAATAACATCTAATGAGGTTGTTGAAATGAATATTTTCAGAGCTACGAGAAGATTCACCTGGACTTCCTGAAAAGCGATCACCCAGCTGTCACTCGAATGAGAGGGGACTGTGACAATGCTTACATTGGTGTCACCTACAAGAAT---GAAGACAAGATAAAGGATAGAGAGAGTGGATTTGATGAGCAGAGGCTGAGTGCTGACAGTGGGTACATCATCCCCCTGCCTGACATTGACCCTGTTTCTGAAGATGAG---CTTGGCAAAAGGAACAGGCACAGGTGG ..:..x:x.....::.:..x.::.xxx.xx.......:...x:....:..:..:..:....................:..:..:..:..x.....x:.x..x...x.x.x.....xx........x....................:..:---.........x.:.....:x.:...:....x:.x...........:.....:...........x........:..:....................::....:..x...---..x.....:........:.......:. 150M3D108M3D27M 224/285 78.6% 285/94230402 0.0% 6/285 2.1% 27332568 NA +29497 chr4 + 190214555 54295098 54295097 54296269 1172 ATATTTGCTCT----TCTCTCCCTCCTCCAGCTCGCAGACCTCTGAAGAGAGTGCCATTGAGACGGGTTCCAGCAGTTCCACCTTCATCAAGAGAGAGGACGAGACCATTGAAGACATCGACATGATGGATGACATCGGCATAGACTCTTCAGACCTGGTGGAAGACAGCTTCCTGTAA---CTGGCGGATTCGA---------GGGGTTCCTTCCACTTCTGGGGCC--ACCTCTGGATCCCGTTCAGAAAACCACTTTATTGCAATGCAGAGGTTGAGAGGAGGACTTGGTTGATGTTTAAAGAGAAGTTCCCAGCCAAGGGCCTCGGGGAGCGTTCTAAATATGAATGAATGGGATATTTTGAA-ATGAACTTTGTCAGTGTTGCCTCTTGCAATGCCTCAGTAGCATCTCAGTGGTGTGTGAAGTTTGGA--GATAGATGGATAAGGGAATAATAGGCCACAGA-AGGTGAACTTTGTGCTTCAAGGACATTGGTGAGAGTCCAACAGACACAATTTATACTGCGACAGAACTTCAGCATTGTAATTATGTAAATAACTCTAA--CCAAGGCTGTGTTTAGAT-TGTATTAACTATCTTCTTTGGACTTCTGAAGAGACCACTCAATCCATCCATGTACTTCCCTCTTGAAACCTGATGTCAGCTGCTGTTGAACTTTT---TAAA--GAAGTGCATG-AAAAACCATTTTTGAACCTTAAAAGGT-------------------ACTGGTACTATAGCATTTTGCTATCTTTT----TTAGTGTTAAAGAGATA--------AAGAATAATAATT--AACCAACCTTGTTTAATAGATTTGGGTCATTTAGAAGCCTGACAACTCATTTTCATATTGTA----ATCTATGTTT-----ATAATACTACTACTGTTATCAGTAATGCTAA----ATGTGTAATAATGTAACATGATTTCCCTCCAGAGAAAGCACAATTTAAAACAATCCTTACTAAGTA----GGTGATGAGTTTGACAGTTTTTGACATTTATATTAAATAACATGTTT----CTCTATAAAGTATGGTAATAGCTTTAGTGAATTAAATTTAGTTGAGCATAGAGAACAAAGTAAAAGTAGTGTTGTCCAGGAAGTCAGAATTTTTAACTGTACTGAATAGGTTCCCCAATCCATCGTATTAAAAAACAATTAACTGCCCTCTGAAATAATGGGATTAGAAACAAACAAAACTCTTAAGTCCTAAAAGTT chr4 - 94230402 26959338 26959337 26960550 67269853 67269852 67271065 1213 ATTTTAGCTCTGAGATCTTTGTCTCTTCCAGTTCCCAGACATCTGAAGAGAGTGCCATTGAAACCGGTTCCAGTAGCTCTACCTTTATAAAGAGAGAGGATGAGACCATTGAGGACATTGACATGATGGATGACATTGGAATTGACTCCTCGGATCTTGTAGAGGACAGCTTCCTGTAATCCCAGACACCTTCTAACTGCACATGGGGAAGCTTACCGTGCTGTATACAGACTTCTG--CTACACAGAGAAAACCACTTCGTTGCAATGTCAAGGATGTGAAGAGAA---GATGGATTTGTTAAGAGGGATGCCCAGTGATGGGCA-AAGGAATCAGCCTGAGAATGAAAGGGAGAGAACTGTCAAAGATGGATTTTTTTAGTGTTGCTTCTTGCAGTACTTTATGAGCATCTCAGCGTTGTTTGCCATTCCAACTGGTAGA-GGACAACAGAA----AGGCCACAAACAGACCAGTTTTGTGTTTCAAGGGCATTCCTATGACTTTGATGGATAGAATTTCCACTGCAGCAATACTTCATCATTGTAATTATGTAAATAACTATCAGCTCAAGGATCTTTTAAGGTGCACATTGAACACACTCCATGGATTTTAGAAGAGATCACCCATGAATTTTGTGCACTTCTTCCCTCAATCTCAGTGTCAGCTGCTGTTGAACTATCATGTGAATTGAAGAACATGCAAAAACCACTCTTAGA-CTGAGAAGGTCTGAAACCACAAAAAACTGACCGGTACTACAAAA-CATGTTACTTTTTAACATTAATGCAAGGGGaataataataataataataataatTAAAACCAGTC---TATAATAGGT--------GTTAGAAACCTAGTAAGTCTTTATTA-ACTATAGAAGATAGCTGTTTTCATGATAATACTACTACTGTTTTCCGTAACACTAAGCCTATATTTTATAAT------TCATTGTCCTTCAGA-AAAGCACAGTCTCAAGAAA-CATTATTAAGTACAAGGAAAAAAAATATGAC-----CTGAAAATGTGATGAAGCAACCTTTATCAGGCCCTACAGAGTATGATAATTGCTCCGACTAGCTAAAACTACTTTAATATGGAGAAAAAATTGCATCCTGTAATACACTAAGATTTAGTTTTCTATTTTGAATAGAGCAGCTTGTCTAATCAGCTGTACT-AGAAACAATT-ATTGTCCTCCAATTAAATGAACTTCTAAGCATTCaaaaattt----ttttaaaaatt ..x..x.....----...:.x:...:.....:..x.....x....................:..x........:..:..:.....:..x...........:...........:.....:.................:..x..x.....:..:..:..x..:..:...............---.x.:.:xx...x.---------....xxx...x.xx.x...x:xx.--..:....--::x.::xx............::........:x:...x..x..:...:.---.:.x...x.x.x.....:::.x.....:x.x....x-x:..:.x.:x:..:.:x.....x.::x.:..xx.x.::..-...:.:...x.:........:.......:.:.:.:.xx..........:.x...x..xx:..:x:.--.:....-...:..x:...----........:.-..::x.::......:.......:....xx.:x..x.:::.::..:.x.....x:.....::..:x......x......................x.x.--:.....x.x.x..x..:.-:::...:.x:.:x:..:x....:..:x.......:...:..xxxxx.:::..:.....:::.:.x..x.::::...................x.:---.:..--....x:....-........:.:..::.-..x.:.....-------------------..:.......:.:x.-:x..:..::....----...:..:x.::.::...--------..x..........--.....::.---.x......:.--------x......:...:::..x..x..x.:.-.:.:..----..xxx.....-----.................x..x....::....----..:.x.x.....------.x...x:...:....-........:.:.x..:x..-.x...:......----.:x:.x:.:.x....-----:...x.x.xxx..x..::...x.x.x.----.:...:.:......:....x...:::::x.::....x:..x..x.::..:.....x...x.:x.xx:x..:x.::x.x:::.x.:..xx..:.xxx:..x.:x..::..x..x:.:....x:::...:.-.:........-.:..:....::.xxx....::x..xx..:..xx.....x.:.----.::.....:.. 11M4I164M3I13M9I24M2I7M2D48M3D36M1D40M1I66M2I6M1D11M4D10M1I98M2I18M1I95M3I4M2I10M1I16M1D10M19I15M1D13M4I17M8I13M2I8M3D10M8D26M1D6M4I10M5I31M4I12M6D15M1D19M1D12M4I15M5D27M4I129M1D10M1D42M4D11M 775/1128 68.7% 1213/94230402 0.0% 129/1128 11.4% 27335760 NA +23563 chr4 + 190214555 54297669 54297668 54298317 649 TGTTTTCAGCAAATTCCAGATTTGTTTCCTTTTGGCCT----CCTGCAAAGTCTCCAGAAGAAAATTTGCCAATCTTTCCTACTTTCTATTTTTATGATGACAATCAAAGCCGGCCTGAGAAACACTATTTGTGACTTTTTAAACGATTAGTGATGTCCTTAAAATGTGGTCTGCCAATCTGTACAAAATGGTCCTATTTTTGTGAAGAGGGACATAAGATAAAATGATGTTATACATCAATATGTATATATGTATTTCTATATAGACTTGGAGAATACTGCCAAAACATTTATGACAAGCTGTATCACTGCCTTCGTTTATA--TTTTTTTAACTGTGATAATCCCCACAGGCACATTAACTGTTGCACTTTTGAATGTCCAAAATTTATATTTTAGAAATAATAAAAAGAAAGATACTTACATGTTCCCAAAACAATGG-TGTGGTGA---ATGTGTGAGAAAAACTAACTTGATAGGGTCTACCAATACAAAATGTATTAC-GAATGCCCCTGTTCATGTTTTTGTTTTAAAA--------CGTGTAAATGAAGATCTTTATATTTCAATAAATGATATATAATTTAAAGTTATACTAAGGTTTCAGCATTTTTGTTTTTAGTTTAATCATAAGAATTAAAGCAATCCTGTTCTATTTACTTTCT chr4 - 94230402 26962181 26962180 26962821 67267582 67267581 67268222 641 TATTTTCAGTA--TTACCAACCTTTTAGTTTATGGCTTAATTTTTGAGAAGCCACTGGAAAAGATATTCCCAAATCTTACTCTAGGGTAATTGTATAATGACAATCAGTGTTAGCCT----ATCACAGCCTTTGA--TTTGGAATGGCCAACCAATTCCTTACAGTGTGGTCTGC-AGCTTGTACAAAATGGTCCTATTAC-ATGGTGAAGGACGTGAGATATGGTGATGTTATACATCAATATGTATATAAGTATTTTTATATAGACTTTTAGAATACTGCCAAAACATTTATGAC-AGCTATATCACTGCCTTTGTTTATATTTTTTTTTTACTGTGATATATTCCACAGGCACGTTAACTGTTGCAC-TTTGAATGTCCAAAAGTTATATTTTAGAATAATAAAAAAGGAAG---------TGTTTCCAAAATGGTGGCTGTTGTGAAATATTTGAAGGGCAAACTAGCCTGAGTGATGGTA--GGCACGAAATGTATTACAAAATGCCCCTGTTGATATTTTGTCTTTGAAAAATCAAATCCTGTAAATTAAGATCTCTATATTTCAATAAATGATATATAATTTAAGGATATGTGAGGGGTCTATACTCACTTATTGAAAAATTGTTATAAG----GGATCAATCTTGCTTGATTTTTTTTTT .:.......:.--..x.x:.::.x..xx:..x....:.----::..x:...:.x.::...:.:.xx..x....x::..x..x:xxxx..x..x...:..........:x.:::....----.x...x:::.x...--...x:..:.:::.::x.xx......x.:..........-.:::...................x:-:..:x..:....:.:.....x::..........................x......:...........xx.........................-....:............:.......--.......x.........xx::..........:.............-...............x.............xx.xx......:...---------....:......:::...-...x....---..x..x::.:x......:.:...xx.:xxx..--:::..:...........-:............x..:....xx:...:...--------.x.......x.......:.............................:.x...::x.:..x.::.xxx.:x:.xx..xx.:xx.x:.:.....----::.x.....:..:.:x....x:...:. 11M2D25M4I75M4D14M2D38M1D25M1D95M1D25M2I45M1D44M9D17M1I8M3I32M2D17M1I31M8I93M4D27M 459/622 73.8% 641/94230402 0.0% 46/622 7.4% 27335488 NA +3239 chr4 + 190214555 54304337 54304336 54304435 99 AAAACAACAACAACAAAAACAAACAAACAAACAAACAGAAAAAACACTACAGACCGATATCCTTGATGAACATAGATGCTAAAATCCTTAACAAAATAC chr4 - 94230402 68812208 68812207 68812292 25418111 25418110 25418195 85 AAAACCAAAATGCTAAAAAAAAACAAACAAACAAACAAAAAAAACACCCCAAA--------------AACCCTAGAGGCTGAACTTCCTCACTCAGTAC .....x.x..::x:.....x.................:.........:x..:.--------------:.x.x....x...:..x.:.:.x..xx.:... 53M14D32M 62/85 72.9% 85/94230402 0.0% 14/85 16.5% -14507871 -79722531 +3100 chr4 + 190214555 54326528 54326527 54326591 64 GAGACAGGAGAGGGAGAGGGAGACCGTGGGGAGACGGGAGAGGGAGAGGGAGAGGGAGAGAAAA chr4 - 94230402 86549271 86549270 86549334 7681069 7681068 7681132 64 GGAGCAGGAAAGGAAGAGATTGAACGTGGTGAGGGAGAGAAGGGAAAAGGATGGGGAGAGAAAA .:::.....:...:....:xx..x.....x...:x:.:::.....:.:...x:........... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -32222743 -62007659 +3082 chr4 + 190214555 54360826 54360825 54360919 94 CCTCTCATTTGAAGTGGATAATTATTGTATTATTGTTATTATTTTCATTTTACAGATGAAAAACTGAGATGCAAGGAGATTATGGGTATGATTC chr4 - 94230402 4115137 4115136 4115230 90115173 90115172 90115266 94 CCTTTCATCTGACCTAAATTCCATTGGCCTTCATCCTTTCATTTTCATTTTACAGATGGAAAACTCAAATACAGGTAGACTAAGTTTATTACCC ...:....:...xx.::..xx:xx.x.:x..xx.x:.x.:..................:......x.:..:..:.x...:..x.xx...x.::. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 50245689 NA +3449 chr4 + 190214555 54362751 54362750 54362824 74 CTGCAGCCTTTACCTCCCAGGTTCAAGTGATCCTCTCACCTCAGCCCCGCTAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx.x..:.::..........x.:.x.xx:x.......::x.x.........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 36165625 NA +5309 chr4 + 190214555 54368985 54368984 54369115 131 AGCCTGAGCTGAAAAGTATTTTGCTAAAGCACAGCTATATATAGAAACTTCTCATCTGTCTGAAG----ATATAAACAACTGCAGGAAGTTTGGAATATGTTGTTAAGACTGTTCTCTTGGTTTCCTCGTCACAG chr4 - 94230402 26972944 26972943 26973077 67257326 67257325 67257459 134 AGCACTAGCTACAAGGTATTTCGCACTAGTCCACAAGTAAGAAAAAGCTTTTCATCAGTCTGAGGTATGGTATAAACAACCTCAGGAAGTTTGGAAAATGTTGTTAAAACTGTTCT-GCAGTATCCTTGTTGCAG ...x:x....:x..:......:..xxx..:x..xxx:..x:x.:..:...:.....x......:.----:..........:x..............x..........:........-x::..x....:..::... 65M4I47M1D18M 94/130 72.3% 134/94230402 0.0% 5/130 3.8% 27396041 NA +3133 chr4 + 190214555 54380423 54380422 54380461 39 TTCCTTCCTTTCTTTTCTTTTTCTTTTCTTTTTTTTTTT chr4 - 94230402 92014229 92014228 92014267 2216136 2216135 2216174 39 TTCCTTCCTTTCTTTCCTTTTTCTTCTCTCTTTTCTTTT ...............:.........:...:....:.... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -37633806 -56596596 +3830 chr4 + 190214555 54380520 54380519 54380599 80 TCTGCTACCTCCACCTCTGGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCGCCAC chr4 - 94230402 18197125 18197124 18197202 76033201 76033200 76033278 78 TCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...:.x:..:xx.x..::x...........x...x..x.x........::...........:......--:....:.... 68M2D10M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% 36183395 NA +4315 chr4 + 190214555 54380753 54380752 54380827 75 TCTTTTCTTCCTTCCTTTCCTTCCCTCCCCTCTCTCCTTCCCTCCCTCTTTCCTTCCCTCCCTCTCTCTTTCTGT chr4 - 94230402 11801303 11801302 11801375 82429028 82429027 82429100 73 Tcttccctcccctcccctcc--ccttccctTCTTTATTTTGCTCCCTCTTTCCTTCCTTCCCTCTTTCTTTTTGT ....::..:..:...::...--..:....:...:.x:..:x................:.......:.....:... 20M2D53M 57/73 78.1% 73/94230402 0.0% 2/73 2.7% 42579450 NA +4183 chr4 + 190214555 54389476 54389475 54389545 70 CTTACTAACTGTGTGACCTTGGGAAAATTACTTACCCTTCCTGTGCTTCAGTTTCCTCATTTGTAAAATG chr4 - 94230402 11947207 11947206 11947276 82283127 82283126 82283196 70 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG ..:.................:..xx.:.:.....x:..x......:::........:...x.:.:..... 70M 54/70 77.1% 70/94230402 0.0% 0/70 0.0% 42442269 NA +7726 chr4 + 190214555 54398580 54398579 54398947 368 AAAATCTTTAAAAAAAAATGACAGAAACCAGAACATGCTATCTAAAGTATACATCCTCTCCTGTTGTTTTGGAAAGCCAGTGGCACATACTTCATATGCAAGACCCTCATTCTTGGGACCATTACATATGGATCATCAAGTGTTGGTTAC-GCATTTTTATATAAACTTGATCTTGCATAGCTCAGCTGCTTTGCTGAGGCACAGTCCTGAGGAAGGTTGCTT-----GGATTCTCAGTTTAGCATAACATTTGAGTGATACAGCACAGTATTCCTGTTCATATAAATATTTTAGGTTGAAAAAACTCCTTTTGTTATTTTTCTCTCTGCCTAAGAAATA--CTTTCATGAACT--CTTCCCATAACAGAGCAGTTCT chr4 - 94230402 26975894 26975893 26976243 67254160 67254159 67254509 350 AAAATCTAAAAATACAAAAGATAGAAACCAGATTTTGTTATCTAAAATATACATCCTCTCCTGTCGTGCTGGTAACTTAAGTTCACACAGTGTAAACACAGAACTAACAAGCTCTGG-------------TATTGTCATTTG--GGTTACAGCTTTTAAATATAAACTAGCTCC-AAGCAGCTCACAAGGCTCTCCGAGAGA------TCAGGTACATAGATTTCAACACATCTTCAAGTCCACG-AGTGTTTGATTGATATAGTACAGTACTCCTGTTCGTGTAAATATTTGAAGTTGGAGAAA--CCTTCTG---TTTTAAATTCCGTTTAAAAAAAAAGCCAGTTTAAGCTAACTTCCCACAGCAGAGCAGTCCT .......xx...x.x...x..:..........x:x..:........:.................:..x:...x..x::.:xxx....:.x.x:.x.::..::..:xx..xx..:x..-------------x..::...xx..--......-..x...xx.........x.x..:-:x::......xxx.x:.:x.:...:x.------.x...x.x:.x.x..-----:x..::...:x.:x:.:-.:::.....x.....:..:......:........:.:.........x.:....:.:...--....:..---....xxx:..:.::...:...x.--.:xx:x.:.:..--.......:.:.........:.. 117M13D12M2D6M1I23M1D27M6D15M5I17M1D59M2D7M3D23M2I12M2I22M 228/340 67.1% 350/94230402 0.0% 38/340 11.2% 27422686 NA +4147 chr4 + 190214555 54399299 54399298 54399383 85 TTCTCTTCTCTTCCTTCCTTGTCTTCCTTTCTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982265 18982264 18982349 75248054 75248053 75248138 85 ttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA ....:..:....:...:...x::..::...::x.xx.x.x.x.x.x.x.x................x.................. 85M 63/85 74.1% 85/94230402 0.0% 0/85 0.0% 35417034 NA +3848 chr4 + 190214555 54399299 54399298 54399384 86 TTCTCTTCTCTTCCTTCCTTGTCTTCCTTTCTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982284 18982283 18982356 75248047 75248046 75248119 73 ttctttttttttctctctctctctctctctctG-------------TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ....:..:.:...::..::.x...::..:....-------------................x.x...............::..:. 33M13D40M 57/73 78.1% 73/94230402 0.0% 13/73 17.8% 35417015 NA +4791 chr4 + 190214555 54399299 54399298 54399395 97 TTCTCTTCTCTTCCTTCCTTGTCTTCCTTTCTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA-GAAAGATTTATCTT chr4 - 94230402 18982270 18982269 18982364 75248039 75248038 75248133 95 ttttctttctttctttctttttttttctctctc---tctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTT ..:....:::...:...:..x.:..:..:...x---.x.x.x.x.x.x...................................-...:.......:.. 33M3D47M1I14M 75/94 79.8% 95/94230402 0.0% 4/94 4.3% 35417029 NA +3854 chr4 + 190214555 54399300 54399299 54399380 81 TCTCTTCTCTTCCTTCCTTGTCTTCCTTTCTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 18982275 18982274 18982350 75248053 75248052 75248128 76 tttctttctttctttttttttctctctctctc-----tctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG .:....:::...:..::..x...::..:...x-----.x.x.x.x..................x................. 32M5D44M 59/76 77.6% 76/94230402 0.0% 5/76 6.6% 35417025 NA +3102 chr4 + 190214555 54399345 54399344 54399380 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -27229719 -67000683 +3316 chr4 + 190214555 54399347 54399346 54399382 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -27229717 -67000685 +3198 chr4 + 190214555 54399349 54399348 54399391 43 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGATTTA chr4 - 94230402 81629064 81629063 81629106 12601297 12601296 12601339 43 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTA ..........:.....x..................:x.x.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% -27229715 -67000687 +4362 chr4 + 190214555 54420522 54420521 54420603 82 GATCTACCTAAATTTTCATAAAAGTTCCTATGGGATGTCAGTTTGAATAATTAGAATTGACATTTTGCTTACAAGCAAAATA chr4 - 94230402 26980359 26980358 26980440 67249963 67249962 67250044 82 GAGCTGCCTGTATTTTCATAAGGGTGCCAGTGGGGTACCAGTTTGAATAATTAAACTTTTCATTTTACTCATGTGCAAAATA ..x..:...:x..........::..x..x:....:.::...............:.x..xx......:..:.::x........ 82M 61/82 74.4% 82/94230402 0.0% 0/82 0.0% 27440163 NA +3157 chr4 + 190214555 54424051 54424050 54424124 74 CTGTAACCTTGAACTTCTGGGCTCAAATGATCCTCCTACTTTAGCCTCTTGAGTAGCTAGGACTATAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::.:..:x:.:........:....:..x.:.x.xx:x:.:.....:.::.......:.:....:.x.:.... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 36226925 NA +18588 chr4 + 190214555 54440548 54440547 54441067 520 GGATTTGGGAAAATCTTCATGTCACTCTTTTAATAAAGCCACAGTGAGCACTTCAT-GCTGCTTCCACTTCCCACACACAAACTTTCTAATTATAAAAGGACCTTTTCAGACTTATTCAGGGCATATAATCTTATTTGCAGCTCCTAATTGGAGGACTGTGTTTGTTGAAAAGAACAGAAGTCTTCAGTCATTTAGAA-TAAAGCTGGCCCATCAACCCCTGTGGGAAGAAAAGAACTATTTATTTTATCCGTTAATCCCAAATACAAAC---ACAATAAAGCTGTCTTTTCTAATAGTGACCTATTTCATGTTAAATTGGGATAAAGCTAGCTTTGCTCAATAAGACTATTGTTGTCAACAAAAAAGTCAA--TCTTATTAGGATTCCCATTGAATAACTTCCAATAACTTATCTTTTAAAATGCTAAACCCAAATCCCAGTTGAATTCTCTACGTT--GTCTGCAAA--TCGGGAAAGGAAATAACCTCAACCGGTGAGCCCCATCTAGTGTCAGGGAAGTAAATTGCT chr4 - 94230402 26987300 26987299 26987790 67242613 67242612 67243103 491 GGATGTGACAAAGTCATTA-GTTAGTATTTTAAAAGAATTACAATGAACACTAAAGAGAGACCCCCACTTCCCCCATACAAACTTTCTAGTGATAAAGAG-CCTTTTCAGACT----------GTATAATCCTATTTACTGTTCTTAATTGGAGAACTGTGTTTGTCAAAAAGTACAGAAGTCTTCAGTGGTTTGAAAGTGAGTCTGGCTCATCAGTTCCCAAGGGAAGAAAAGGACTATTTATTTTAACCGTTGAGCCTAAACGCAAACTGCACAATAAATCTGTCTATCCAAATACTGACCTATTTCATGTAATGTCGGGGTGAGGCTGGCCTTGCTGTATGAGGCTATTGTTGCCGACAAAAAAAGCAAGCCCTGTTCGGGCAGCCCCTTG--CAGCTCCCAAGA---------TGGGGATG-TATGCTCA---CCCA---------CCCACCCTCAGCCTGAAAAAGTCAGGAAAGG----AACCTCAGTTACCCAGCTCCATCTAGTGTCTGGGAAGGAAATCACT ....x..:x...:..x.:.-..:.x.x......x.:.:::...:...:....xx.x-.xx:.::.........x..:............:.x.....::.-............----------:.......:.....:.x.:..:.........:...........::.....x...............x:...::..-.:.:x.....:.....:::..::x...........:.............x.....:.x..:...::.....---........x......x.:.x....x...............x.x:.:...:.:.:...:..:.....xx..:..:.........:.:........:x...--:..xx.::..xxx...x...--:.:..:....x.---------.x:::...-..x:.:..---....---------:.:..x:.--.:...x...--..:.......----.......::::x:x...:............x......x....::.. 19M1D36M1I43M1D12M10D75M1I71M3I99M2I20M2D12M9D8M1D8M3D4M9D8M2I9M2I10M4D46M 358/480 74.6% 491/94230402 0.0% 51/480 10.6% 27453248 NA +3100 chr4 + 190214555 54477530 54477529 54477579 50 CAGTTGCTATTTTCCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929898 18929897 18929947 75300456 75300455 75300505 50 CAGATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...x..x..:.xxx:..:.............:.................. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 35547632 NA +3013 chr4 + 190214555 54477537 54477536 54477584 48 TATTTTCCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 21634156 21634155 21634203 72596200 72596199 72596247 48 TATCTTTATGTTCTCTCTCTCTCTTTTTTTTTTTTGTATATCTTTTTT ...:..:x.x.........................x.x.x.:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 32843381 NA +3086 chr4 + 190214555 54477546 54477545 54477581 36 TTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...............:.:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 35547634 NA +3595 chr4 + 190214555 54477890 54477889 54477955 66 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCATGTGCCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:...........::x...x.xx.x........::..................--.:..::.... 54M2D10M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 36280751 NA +3003 chr4 + 190214555 54479681 54479680 54479726 46 CAGAATTTGGGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 45399580 45399579 45399625 48830778 48830777 48830823 46 CATAATGTGGATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTT ..x...x...:.::.............:.:............::.. 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 9080101 NA +3404 chr4 + 190214555 54479692 54479691 54479745 54 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGATTCTCTTCTTTCTATAA chr4 - 94230402 18929913 18929912 18929966 75300437 75300436 75300490 54 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAA ..................:.................:.:.:x..:x.:::.x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 35549779 NA +3044 chr4 + 190214555 54479693 54479692 54479726 34 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929945 75300458 75300457 75300491 34 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT .:................................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 35549781 NA +3021 chr4 + 190214555 54488685 54488684 54488720 36 CCCTGCCTCAAAAAAAAAAAAAAAAAAAAAAGGAAA chr4 - 94230402 52964882 52964881 52964917 41265486 41265485 41265521 36 CCCTGCCTCAAAAAAAAAAAAAGAAAAAAAAGTAAA ......................:.........x... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 1523803 NA +3163 chr4 + 190214555 54517289 54517288 54517373 85 CACATGTTTTTGTAAAGTTTGAGAAATGCAATATTTTTTTCTTTTTCTTTTTTCTAAGAGGAACCATAGTTTACAAAGCAATACA chr4 - 94230402 75478954 75478953 75479029 18751374 18751373 18751449 76 CGCATGTTCTGGCAAATGCAGAAGGGTGTGTTATTTTTTTTTTTTTTTCTTTTCTGGGAGGAA---------ACAAAGCACTATA .:......:.x.:...xx:x..::::..::x.........:.....:.:......::......---------........x..:. 63M9D13M 54/76 71.1% 76/94230402 0.0% 9/76 11.8% -20961665 -73268737 +3036 chr4 + 190214555 54520523 54520522 54520605 83 GATCTTGGCTCACTGTAACCTCTGCTTCCCGGGCTCAAGCAATTCTCCTACCTTTTTTTTTTTTTTTTTTTTTTTTCATATTT chr4 - 94230402 25139050 25139049 25139132 69091271 69091270 69091353 83 GGTGCTAGCTCTCAGTTCCTTTTAAAATCAAGACTCAAACATTTTTATAACCTTTCTTTTTTTTTTTTTTTTTTGCCAGATTT .:.x:.:....x.x..xx.:.:.:xxx:.x:.:.....:..x..:.x:x......:..................x:..x.... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 29381473 NA +3162 chr4 + 190214555 54543550 54543549 54543605 56 GGCTATTATCATTAGCCCCATTTTACAGATGAGAAAACTGAGGCTTAAAGAAGCTA chr4 - 94230402 10729189 10729188 10729244 83501159 83501158 83501214 56 GGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTA ..:x....::..:...:...........:..:............x:.x.x.:.:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 43814361 NA +3391 chr4 + 190214555 54584373 54584372 54584436 64 CTCCAGGGTTCAAGTGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGAATTACAGGTGCATGAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.x...........x...x.xx.x...:....::::...........:....x.....:x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 36387234 NA +3214 chr4 + 190214555 54646455 54646454 54646616 162 AGCACTTTACATATATT------AACTCATGTAATAGTCATCATAGCCCTAGGAGGTGGTTATGACCCTATTCTCACCCTATTTTACAGATGAAAAAATTGAGGTGCAGGAAGGTTAAATAACTTGCCCAAGGTCACACAGCTAGGGAGTGAAAGCAAAAGGTGCAGT chr4 - 94230402 15193152 15193151 15193315 79037088 79037087 79037251 164 AATATTTTGCATATTTTGCAAATAGCACCTATAAT-GCTTTCAAAGCACTTTGGAAAGGTGGAAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAG---AAATAAAATTTATAGT .::.:...:.....x..------.:.x.x.:....-.::x...x...x..xx.:::x...x:x:.x:.xx.x:.:x..x:......:.xx..:.::......:::x...:x.::.x.........x..:.......:......x.xx..---..::....xx.::... 17M6I12M1D113M3D16M 97/158 61.4% 164/94230402 0.0% 10/158 6.3% 39453303 NA +4129 chr4 + 190214555 54648406 54648405 54648520 115 GGTGATCTCAAGTAAGTCACTTGACCTTTCAGTGCCTTCCTTTCCTTATCTGTAAAATGGGGCTAATGATAGACCTACCT---------CAAAGCGTTGTTTGAAGGAGAAATGCGATAATACA chr4 - 94230402 42976386 42976385 42976506 51253897 51253896 51254017 121 GGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGATAAATG---GGCCTCTCTTGGATAAGGCAGCCCAGGGGTTGCCAAAGAAATGCGATAACACA .......:::x...........x....:.:::x.....:x.......x....x........::x....---.:...x:..---------..:xx.:xx.x...xx::.............:... 68M3D9M9I35M 80/112 71.4% 121/94230402 0.0% 12/112 10.7% 11672020 NA +4372 chr4 + 190214555 54661407 54661406 54661468 62 AGGGTTTTGACTCATTTCCTCAAGTCTCTTCCAGCTGATTAAAGAAGGACACGAGGAAATGA chr4 - 94230402 27040446 27040445 27040507 67189896 67189895 67189957 62 AGGATTTTGACTCATTTCCTTAAGTCTCTTTCAGCTGTTCAAAGAATGGCTGGAGGAAATGA ...:................:.........:......x.:......x.:.xx.......... 62M 53/62 85.5% 62/94230402 0.0% 0/62 0.0% 27620961 NA +4046 chr4 + 190214555 54666355 54666354 54666428 74 CTGCAGCCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx.x..:.:...........x...x.xx.x........::.:.........:......x.:.... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 36469229 NA +3999 chr4 + 190214555 54699624 54699623 54699729 106 TTCTAGCCTTCAAAGCTGTGCCTGTTGTGTCTGTGTCCAAAGCAAGCTAT---CTTCTTAGGGAAGGGGAAGAATTCACAGTGACGTGCACAATAAAAGATGTGTCTAG chr4 - 94230402 27062234 27062233 27062339 67168064 67168063 67168169 106 TTCCAGTTCACAAAGCTCTTCCAGTCATTACCTTATCCAAA---AGCTATGAGCTTCTCAAAGAAGGGGAAGAATTTGAAGTTACATGCATAATCACGGATGTGGATAG ...:..:::x.......x.x..x..::.xx.:x.:......---......---.....:.::..............::x...x..:....:...x.x:......xx... 41M3D6M3I56M 74/103 71.8% 106/94230402 0.0% 6/103 5.8% 27637390 NA +12606 chr4 + 190214555 54703548 54703547 54703962 415 GAAGTGTTCCAATGACAGACTTGTCATGATGCTTTATTATTCTTACTTAAGTAGTGTATAATGAAAGTTAATATGGAGAAGT--TAATTGCTGCTATTTTTAATTTATCTAGGAAAGATTCTGAATATAAATTATATGGTAATCTTCATTTTTTTTTCTCCTTTTCTGAAACCAGCAGACTAAACTACAGGAGAAATATAATAGCTGGCATCACGGTGACTTCAATTATGAACGTCAGGCAACGTTGACTATCAGTTCAGCGAGAGTTAATGATTCTGGAGTGTTCATGTGTTATGCCAATAATACTTTTGGATCAGCAAATGTCACAACAACCTTGGAAGTAGTAGGTAAATACCT-CTATGGGAATGTTTAAATTACTGGCAGTA----GTGAAAGAAGAAATTATTAGACAGTTTCTTT chr4 - 94230402 27064301 27064300 27064691 67165712 67165711 67166102 391 GAGACATTCTAGTGACAGGTTTGTCATGATGGCTTATTATTCCGGTTTAAA------GTTATGAATATTAATACAGTGAAGTCATAATTACTTCTATTTTTAATTTATCGAGGAAAGATGCTGCATACACAGTGTTTTA-GATGTTAATTGTTTTTTT------------ACCGACAGATTG--TTACAAGCAAAA-------GCAGAAATTTGGGTGATTACGGATACGAAAGGAAATTAACATTGAACATCCGTTCAGTGGGAGTTAATGATTCTGGAGAATTCACATGCCAAGCAGAGAACCCTTTCGGAAAAACCAATGCCACGGTAACCTTGAAAGCACTAGGTAAATAATTCCTGTAGAAATCTTAACATTTCTAATTGTAGAAGGTGGAAAGGGAAGATACTG---AGTATCTTT ..::::...:.:......::...........x:.........:x::....:------:.x.....x:......::.x.....--.....:..x................x.........x...x...:.x.x.:.x.x:-:..x..x...x......:------------...::....:.:--:....:.x:...-------..x.:x..:xx.....:.x.::x..:...x.xx.:x:...:....x:...x......:.:..................x:....::..::.x..x:.x..:x....:...xx.:.x....:...:::.......:...:.x..........x:.-..:.:.:...x..x.x...x..:::x...----...:..:::...:x..:.:---...x..... 51M6D25M2I55M1D18M12D12M2D12M7D154M1I29M4I19M3D9M 267/384 69.5% 391/94230402 0.0% 38/384 9.9% 27639247 NA +7445 chr4 + 190214555 54709406 54709405 54709547 142 GTTGTCTTTTCTTTGTAGATACGTAAGTGAACTTCATCTAACGAGATTAAAAGGCACCGAAGGAGGCACTTACACATTCCTAGTGTCCAATTCTGACGTCAATGCTGCCATAGCATTTAATGTTTATGTGAATAGTAAGTAA chr4 - 94230402 27068058 27068057 27068199 67162204 67162203 67162345 142 GCTTTTTTTCCTCTACAGTTATACAAGCGAACTTCACCTTACCCGATTAAAAGGAACAGAGGGAGGCATTTACACATTTTTTGTGTCCAACTCAGATGCCAGCTCCTCTGTAACATTTAATGTCTACGTGAAAAGTAAGTGA .:.x.:...:..:.::..x..:::...:........:..x..xx..........x..x..:.......:.........::.x........:..x..:.:..::x.:x.::..:..........:..:.....x.......:. 142M 103/142 72.5% 142/94230402 0.0% 0/142 0.0% 27641348 NA +7714 chr4 + 190214555 54723579 54723578 54723710 132 TGTAGCAAAACCAGAAATCCTGACTTACGACAGGCTCGTGAATGGCATGCTCCAATGTGTGGCAGCAGGATTCCCAGAGCCCACAATAGATTGGTATTTTTGTCCAGGAACTGAGCAGAGGTGAGATGATTA chr4 - 94230402 27072346 27072345 27072477 67157926 67157925 67158057 132 TGCAGCAAAACCAGAGATCCTTACCTTGGATATGCTCGGCAATGACATTCTTCAGTGTGTGGCAACTGGATTCCCAGCCCCTACCATTTACTGGTATTTTTGCCCAGGAACTGAACAGAGGTGAGTTAAGTA ..:............:.....x..:.xx..:.x.....xx....:...x..:..:.........:.x..........xx..:..x..xx.:...........:...........:..........x.:.x.. 132M 104/132 78.8% 132/94230402 0.0% 0/132 0.0% 27651233 NA +5798 chr4 + 190214555 54725844 54725843 54726042 199 TTCTTCCC-----TTTAGATGCTCTGCTTCTGTACTGCCAGTGGATGTG-----CAGACAC-TAAACTCATCTGGGCCACCGTTTGGAAAGCTAGTGGTTCAGAGTTCTATAGATTCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGGCTTACAACGATGTGGGCAAGACTTCTGCCTATTTTAACTTTGCATTTAAAGGTAA chr4 - 94230402 27073555 27073554 27073762 67156641 67156640 67156848 208 TTCTTCCCAGGTGTTTAGA--CTCACCAACGATATCCCCCATGGATGTGAAAGTCAGTTACACAAACTCATCGGTGCCATCCTTTGAGCGGATCCTGGTCGAGAGCACTGTGAACGCCAGCATGTTCAAGAGCACTGGTACCATCTGCTGTGAGGCATCCAGCAATGGTGACAAGAGCTCTGTTTTCTTTAACTTTGCTATTAAAGGTAA ........-----......--...xx.xx.x:..::x..x:........-----...x:..-:.........x.x....:.x....::x:.x.xx....:x....:x..:.::.:x.:..::::......x:..x...:..x:.:x:x...:....x.x..:.:...xx.:.....x:....::.x:...........xx.......... 8M5I6M2D28M5I7M1I148M 132/197 67.0% 208/94230402 0.0% 13/197 6.6% 27652289 NA +27551 chr4 + 190214555 54727201 54727200 54728127 927 TTTCTCTTCCATTGTAGAGCAAATCCATCCCCACACCCTGTTCACTCCTTTGCTGATTGGTTTCGTAATCGTAGCTGGCATGATGTGCATTATTGTGATGATTCTGACCTACAAATATTTACAGGTAACCATTTATTTGTTCTCTCTCCAGAGTGCTCTAA--------------TGACTGAGACAA--TAATTATTAAAAGGTGATCTATTTTTCCCTTTCTCCCCACAGAAACCCATGTATGAAGTACAGTGGAAGGTTGTTGAGGAGATAAATGGAAACAATTATGTTTACATAGACCCAACACAACTTCCTTATGATCACAAATGGGAGTTTCCCAGAAACAGGCTGAGTTTTGGTCAGTATGAAACAGGGGCTTTCCATGTCACCTTTTTGGGTACACATAACAGT---------GACTTTAAGGAACTCCAGTGGCTTCCTTTGTTTTGTTCCACCTGAAACAATGAGTTTTCTGTGAAATTGCGCCCCTTTTGATAGGTTTGCCATAGAGA-ACATCGTAGGAAAATGTCTCTGGACAACATTGTTTTTAATTCCTTTATTGATTTTGAAACTGCAC---------------AAATGGTCCTTCAATTCCACCACCAGCACCATCACCACTTACCTTGTTGTCTTCCTTCCTACAGGGAAAACCCTGGGTGCTGGAGCTTTCGGGAAGGTTGTTGAGGCAACTGCTTATGGCTTAATTAAGTCAGATGCGGCCATGACTGTCGCTGTAAAGATGCTCAAGCGTAAGTTCCTGTATGGTACTGCA----TGCGCTTGACATCAGTTTGCCAGTTGTGCTTTTTGCTAA--AATGCATGTTTCCAATTTTAGCGAGTGCCCATTTGACAGAACGGGAAGCCCTCATGTCTGAACTCAAAGTCCTGAGTTACCTTGGTAATCACATGAATATTGTGAATCTACTTGGAGCCTGCACCATTGGAGGTAAAG chr4 - 94230402 27074786 27074785 27075684 67154719 67154718 67155617 899 TTTTTTTTTTTTTCTAGAGCAAATCCGTACCCACACCCTTTTCACACCTTTACTAATCGCATTTGGGGTCGCCGCTGGACTGATGTGCATCATAGTCATGATCCTGGTGTACATATATTTGCAGGTAA------AATCAACAGCTCCTGAAGTTGAGGTAGGAAAGAGTGGGAGCTGCCTGAGGGAGCGTCAGTAGTGACAGCTG--------TTCTCTTTCCTTCC-CAGAAACCCAAATATGAAGTCCAGTGGAAAGTTGTTGAAGAAATAAATGGAAACAACTATGTTTACATAGACCCAACGCAACTTCCTTATGATCACAAATGGGAGTTTCCTAGAAACCGGTTGAGTTTTGGTTAGTTTATATTGA-----TTTAATTTCGTCTGTGGGGTGAAACCTGCAGGTCTCATGTGAGACCTTGGTCAAACATAGCAA-------GGTTTTGT-----------CAAAAAG----ATGTGCAAGGATGCAAATAGTGGTAATTGCTCATTTGGGACACAAAGCAAGCAGATGTATCTATGC-----------TAGCTTCCCTAAT-ACCATGAAACAAAACCCTAATCCCTTCCCGAAGAAGTGCTTCAAT----------------TTGCTACACGGTGTATTGTTTTAATTTAT-TAGGTAAAACCCTTGGTGCTGGAGCTTTTGGAAAGGTTGTTGAAGCCACTGCTTATGGCCTATTTAAATCTGATGCCGCTATGACAGTAGCAGTGAAAATGTTGAAACGTAAGTGGCTGTCATCTGCTGCCCAGTTTTTTCTGTCTTCCTTCTGGTAG--GTGCTACTTACTGAGCATTGCGTTTTGCC--TTGCAGCAAGCGCCCATTTAACTGAAAGAGAAGCCTTGATGTCAGAGCTAAAAGTTCTCAGTTACCTTGGTAACCACATTAATATTGTGAATCTACTTGGAGCTTGCACTATTGGAGGTATAG ...:.:..::x..x............:.x..........x.....x.....:..:..:.xx..:.x::...:x.....xx..........:..x..x.....:...::x....x......:.......------.x.::x:xx...::x.::x..xxx..:--------------..x.....:x.:--.x.x..x.:.x..x..--------...:.....:::..-..........x:........x........:........:..:..............:....................:................................:......x..:...........:...x.:x.x:::-----..:x..x..::..x.xx..xx.x..x.:xx:..---------...:..::xx..x:x:..:::-------x.......-----------...x:..----x....x..xx::..xxx.xx..:..:x.x:x.xx.x.:..-...xx.:.:.x.:....x...:x:.-----------..::.:.::..x.-.::x......x:x..---------------..:x:..x.......----------------.::.:..x::x:x.:....:..xx..:x.-:...x........x..............:..:...........:..x............:..x....:..x.....x..:.....x..x..x..:..:...:.x..:.......xx....xxxx.:....x----.x:x::..x.x..xx.:..x:..--.....x:..:..:.--.x...:.x..x..--..x:...:..:........:..x...x.:......:.x.....x..:..x.....:..x..............:.....x.......................:.....:..........x.. 128M6D27M14I12M2I16M8D14M1D145M5D33M9I21M7D8M11D7M4D40M1I25M11D13M1D15M15I15M16D29M1D131M4I23M2D14M2I13M2D123M 608/852 71.4% 899/94230402 0.0% 122/852 14.3% 27652415 NA +5284 chr4 + 190214555 54727413 54727412 54727548 136 CAGAAACCCATGTATGAAGTACAGTGGAAGGTTGTTGAGGAGATAA------ATGGAAACAATTATGTTTACATAGACCCAACACAACTTCCTTATGATCACAAATGGGAGTTTCCCAGAAACAGGCTGAGTTTTGGTCAGT chr4 - 94230402 26945173 26945172 26945314 67285089 67285088 67285230 142 CAGAAGCCAAGGTATGAGATAAGATGGAGAGTCATTGAGTCTATCAGCCCCGATGGCCATGAATACATTTATGTGGACCCAATGCAGCTACCTTATGACTCCAGATGGGAGTTTCCTCGAGATGGGCTAGTGCTTGGTAAGT .....:..x.x......::..x::....::..::.....xxx..x.------....xx.::.x..::....::.:.......::..:..x........::x..:............:x..:.::....::xx:.....x... 46M6I90M 91/136 66.9% 142/94230402 0.0% 6/136 4.4% 27782240 NA +4102 chr4 + 190214555 54728035 54728034 54728113 79 AAGCCCTCATGTCTGAACTCAAAGTCCTGAGTTACCTTGGTAATCACATGAATATTGTGAATCTACTTGGAGCCTGCAC chr4 - 94230402 26950156 26950155 26950234 67280169 67280168 67280247 79 AGGCGCTCATGTCTGAACTGAAGATAATGACACATCTTGGGCCCCACCTGAATATTGTGAACCTGCTTGGAGCTTGTAC .:..x..............x..::.xx...xx:.:.....xxx:...x.............:..:........:..:.. 79M 59/79 74.7% 79/94230402 0.0% 0/79 0.0% 27777879 NA +13953 chr4 + 190214555 54728888 54728887 54729506 619 TCTTGTCCCAGCTGGCTGCTCCTTGTGGCTGATTTTCCC-ACTATGCCACAGTTTGTG----CCTTCATTATTTCCATAATAACGTTACAGAGAGTGTGTGAAGCCCTGCTGTAAACAGAAGTGAACCAGA-GGATTCACGTAGGAAGCTTGATAATAGTAGAATCTTTGAAAGCAGTAACTTCTCTCTGTAA---------AACCAGCAGTCATGCTTGGCTCCAAATACTAATGTCACTTAGAAATTCAGGTTAAAAGAGGCTTGCTTGTTTTATGTTACTCCACATAAGGCTGCTTTTTTGATAAGCAGTGTTAATATATGGGA------------------------------------------------------------TTGTATTGG--------GACTAAGTAGTCTGATCCACTGAAGCTGAATATTAATGGCCATGACCAC---CCTTG------GGTATTTTTATGGGAGGC----------AGAATTAATCTATATATCTCACCTTCTTTCTAACCTTTTCTTATGTGCTTTTA--GGGCCCACCCTGGTCATTACAGAATATTGTTGCTATGGTGATCTTTTGAATTTTTTGAGAAGAAAACGTGATTCATTTATTTGTTCAAAGCAGGAAGATCATGCAGAAGCTGCACTTTATAAGAATCTTCTGCATTCAAAGGAGTCTTCCTGGTAAGACTGATTTACATAAAT chr4 - 94230402 27076830 27076829 27077518 67152885 67152884 67153573 689 TTCTGTCTCAGCAGGCTGTTCTATTTGAATGATTTTTCTTATTATACTAAGGAATATAACACTCTACATCATTTCCAAAA---CATTACTGAAGGAGTGTGAAGCTCTACTGTAAACAGAAGTGAATCAAAAGGATTAATGTTTGAAGCCCGA-ATTACTCGAACGTTTGGAACAAATAACTTCCTTCAGGAAGTGAGCAAAATCAAACAGATGTGTCTGGCCAGAAACATTA---TCAC----------AAGAAGAAAAAGACTTATTTGTTTAATTTT--TTTGTACAATGCTATACTATTGGGGAGGGTGGAAATTAATTGGGAGTGACACAGCTTTCGCTGGACAATAGCTACTTGCCTGTGAAAGAGAAGAAGCTGGGTGGCTTGTCTTAACTTTTCACGTCTAGTCAGTGTAAGGCACTG----TGATTGTTAACAGACCAGTCTGTGTGCTTTGCTGAATGGTATCTTTATGTAGGGTTTTCTGCTTTGGAAATAAT-------GCCCACCTGCTTTCTCAAC----CTCGTGTACATCTACAGGGCCCACGCTGGTCATTACAGAATATTGCTGCTATGGCGATCTCTTAAATTTCCTGAGGCGGAAGCGAGATTCATTCATTTGTCCAAAGCATGAAGAGCACGCAGAAGCAGCTGTTTATGAGAACCTTTTGCACCAGGCAGAGCCCACAGCGTAAGTGTGACCTGCTGAAGT .::....:....x.....:..:x.x..:x.......:.:-.:...:.:.x:.xx.:.:----:..x...:.......x..---.:....x..::.x.........:..:.................:..:.-.....x.:..xx.....::..-.x..x.x...:x....:..xx.:.......::..x.x..---------.x.x.:...x::..::....:xx...:.:..---....----------.:.xx:...:..:...::......x..x..--.::::.:..x...::x:.x...:x:..x:xx.xx.x..xx.....------------------------------------------------------------....x..::--------.x...:x:...x.:.xx.....----...x.:....::.x.xx.x.:::---.:...------.....:......x::..:----------:...x....-------x.:.....x......x.x.----..::...:.x.:..--........x....................:........:.....:..:.....::....:x.:..:..x........:......:.......x.....x..:........x..xx.....:....:...:....::x::x:...:.:x.xxx.....xx...::.:.xx..:. 39M1I18M4I18M3D48M1I21M1D39M9I31M3D4M10D30M2D45M60I9M8I22M4D23M3I5M6I18M10I9M7D19M4D14M2I173M 402/585 68.7% 689/94230402 0.0% 138/585 23.6% 27652058 NA +6039 chr4 + 190214555 54731301 54731300 54731427 127 AGTCATGACTTGTTTCATCTCT---CCCAGCAGCGATAGTACTAATGAGTACATGGACATGAAACCTGGAGTTTCTTATGTTGTCCCAACCAAGGCCGACAAAAGGAGATCTGTGAGAATAGGTGAGTAC chr4 - 94230402 27079211 27079210 27079340 67151063 67151062 67151192 130 AATCATGTTTCGTTTCATCTGCTGCCTCTGCAGGGATGCTGTCAATGAGTACATGGACATGAAACCAGGAGTGTCATATGCTGTTCCCCCAAAAGCTGATAAAAAAAGGCCGGTGAAATCTGGTGAGTAC .:.....x:.:.........x:---.:.x....x...:x.:::.......................x.....x..x....:...:..xx.x..:..:..:....::..::.x....:.x:x......... 22M3I105M 93/127 73.2% 130/94230402 0.0% 3/127 2.4% 27652090 NA +4065 chr4 + 190214555 54731854 54731853 54732004 151 TCCTCTCTTCCTCA-CAGGCTCATACATAGAAAGAGATGTGACTCCCGCCATCATGGAGGATGACGAGTTGGC---CCTAGACTTAGAAGACTTGCTGAGCTTTTCTTACCAGGTGGCAAAGGGCATGGCTTTCCTCGCCTCCAAGAATGTAAGT chr4 - 94230402 26953255 26953254 26953394 67277009 67277008 67277148 140 TTCTCTCTTTTTCAATAGAATCAGAAGTAAAAAA----------CCTTCTTTCA-----GATGACGGTTCGGAGGGTCTAAGCCTACTGGATTTGCTAAGCTTCACCTACCAGGTTGCACGGGGAATGGAATTCTTGGCTTCTAAAAATGTAAGT .:.......::...-:..:x...x.x:..:...:----------..:x.:x...-----.......:x.:..x---:...::.:..xx:..:.....:.....:x.:........x...x:...x....xx...:.x..:..:..:......... 14M1I19M10D10M5D14M3I79M 94/136 69.1% 140/94230402 0.0% 19/136 14.0% 27778599 NA +7327 chr4 + 190214555 54731866 54731865 54732004 139 CACAGGCTCATACATAGAAAGAGATGTGACTCCCGCCATCATGGAGGATGACGAGTTGGCCCTAGACTTAGAAGACTTGCTGAGCTTTTCTTACCAGGTGGCAAAGGGCATGGCTTTCCTCGCCTCCAAGAATGTAAGT chr4 - 94230402 27079670 27079669 27079808 67150595 67150594 67150733 139 CATAGGATCTTACACCGATCAGGATGTTACCCTTTCCATGTTGGAAGATGACGAACTTGCTCTAGATGTTGAAGATCTATTAAGCTTCTCTTACCAGGTGGCAAAGGGCATGAGCTTCCTGGCCTCTAAAAACGTAAGT ..:...x..x....:x..xx::.....x..:.::x....xx....:........::.x..:.....:x.x.....::.::.:.....:........................:x:.....x.....:..:..:...... 139M 102/139 73.4% 139/94230402 0.0% 0/139 0.0% 27652196 NA +3656 chr4 + 190214555 54733066 54733065 54733164 99 ATAGTGTATTCACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCCAGAGACATCAAGAA chr4 - 94230402 7799508 7799507 7799606 86430797 86430796 86430895 99 ACAGTGCATTCATCGTGACTTGGCAGCCAGGAATGTGTTAGTCACTGAGGACAATGTGATGAAAATAGCTGATTTTGGCCTTGCTAGAGACGTTCACAA .:....:.....:x.x..............:...:.x:.xx.:...x.x.::x:x:.x.::..:..xxx.........:..x..:......:.:x.x.. 99M 65/99 65.7% 99/94230402 0.0% 0/99 0.0% 46933558 NA +9133 chr4 + 190214555 54733067 54733066 54733210 144 TAGTGTATTCACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCCAGAGACATCAAGAATGATTCTAATTATGTGGTTAAAGGAAACGTGAGTA--------CCCATTCTCTG chr4 - 94230402 27082658 27082657 27082809 67147594 67147593 67147745 152 TAGTGCATTCATAGGGATCTGGCAGCAAGAAATATTCTTCTCACTCATGGTCGAATAACAAAAATCTGTGACTTTGGTCTGGCAAGAGATATAAGGAATGACTCAAATTACGTGGTTAAAGGAAATGTAAGTATGTGGTACCTTATCCTCTG .....:.....:..:..::.......x........:..:..:...........:..x.....:..:.....:........:..x.....:..x.:......:..x.....:..............:..:....--------.::..:..... 133M8I11M 117/144 81.2% 152/94230402 0.0% 8/144 5.6% 27650409 NA +6383 chr4 + 190214555 54733068 54733067 54733261 194 AGTGTATTCACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCCAGAGACATCAAGAATGATTCTAATTATGTGGTTAAAGGAAACGTGAGTA-----------CCCATTCTCTGCTTGACAGTCCTGCAA--AGGATTTTTAGTTTCAACTTTCGATAAAAATTGTT chr4 - 94230402 26953965 26953964 26954167 67276236 67276235 67276438 203 AGTGCGTACACCGTGACTTGGCAGCTCGTAATGTCCTTCTGGCTCAAGGCAAAATCGTGAAGATCTGCGACTTTGGGTTGGCTAGAGACATCATGCATGATTCCAACTATGTCTCCAAGGGCAGCGTATGTATTTCTTAATCTCCCAAGCTCTGCTTTA----ACTGCAATGAGAAGTGTCAGCCTTAAATGCTGGTTAGCAGTATT ....::.x...x.x...........:x.x...:....:..x:....x..:x::...:::.....:..:..:.....x:.:..:..........x.x.......:..:.....xx::..:..x.:...:x...-----------....xx........x.----x......--..:.x.x.:..::.:..x.x::.:.x.:x.x.:.. 132M11I16M4D7M2I35M 129/190 67.9% 203/94230402 0.0% 17/190 8.9% 27779103 NA +3208 chr4 + 190214555 54736473 54736472 54736568 96 TGACTCTGTTGTGCTTCTA-TTACAGGCTCGACTACCTGTGAAGTGGATGGCACCTGAAAGCATT-TTCAACTGTGTATACACGTTTGAAAGTGACGT chr4 - 94230402 7801123 7801122 7801219 86429184 86429183 86429280 97 TGTTCCCATTGTTTTCCTAATCACAGGGTCGGCTGCCTGTGAAATGGATGGCTCCAG-AAGCATTGTTTGACCGGGTCTATACTCACCAGAGCGATGT ..x::.::....x:.:...-.:.....x...:..:........:........x..x.-.......-..::..:.x..x..:..x:x:x.:..:..:.. 19M1I37M1D7M1I32M 66/95 69.5% 97/94230402 0.0% 3/95 3.2% 46935350 NA +6208 chr4 + 190214555 54736487 54736486 54736612 126 TTCTATTACAGGCTCGACTACCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGTGTATACACGTTTGAAAGTGACGTCTGGTCCTATGGGATTTTTCTTTGGGAGCTGTTCTCTTTAGGTA chr4 - 94230402 26954670 26954669 26954795 67275608 67275607 67275733 126 TTCTGCTACAGACCTTCCTCCCAGTAAAATGGATGGCACCTGAAAGCATTTTTGACAATCTGTACACAACATTAAGTGATGTCTGGTCTTATGGCATTCTGCTGTGGGAAATATTTTCTCTTGGTA ....::.....:.::xx..x..x..:..:.......................::..x:.x.:.....:x:xxx......:........:.....x...:.x..x.....:x.:..:...:.x.... 126M 91/126 72.2% 126/94230402 0.0% 0/126 0.0% 27781817 NA +13019 chr4 + 190214555 54736507 54736506 54736825 319 CCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGTGTATACACGTTTGAAAGTGACGTCTGGTCCTATGGGATTTTTCTTTGGGAGCTGTTCTCTTTAGGTAAAATGATCCTTGCCAAAGACAACTTCATTAGACTCAGAGCATCTTCTTGAAGTTTCATTGGTGTCCTGCTTCCT-TGTGATTAACACTGCTTTGCAAACTGTGTCT---CAGGAAGCAGCCCCTATCCTGGAATGCCGGTCGATTCTAAGTTCTACAAGATGATCAAGGAAGGCTTCCGGATGCTCAGCCCTGAACACGCACCTGCTGAAATGTAAG chr4 - 94230402 27085406 27085405 27085711 67144692 67144691 67144997 306 CCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGCGTTTACACCTTCGAGAGTGATGTCTGGTCTTATGGAATATTGCTTTGGGAACTCTTCTCCTTAGGTAAG--------TTCCATCAAAATCTGTACTG---TGGGGGGGTTTT------GTTTCACTTTGGCTTTACTCCATCTGCAGCAAACCACGCATCTCACCTGTTCTCTCAACAGGAAGCAGCCCTTACCCAGGGATGCCCGTGGACTCCAAGTTCTATAAAATGATCAAGGAGGGATATCGGATGTTCAGCCCCGAGTGCTCACCCCCCGAAATGTAAG ......................................:..x.....x..:..:.....:........:.....:..x..x........:..x.....:........:--------.x...xx:.x.x..x:.:.:---.x:.:.x:.:..------......:.xxx.:::.:..:.x.-..::::x...xx:..x.:x..xx:xx.x...---.............:..:..x..:.....x..x..:..:........:..:...........:..x.x:......:.......:..:::.x....:x.:.......... 108M8D20M3D12M6D23M1I31M3I108M 222/302 73.5% 306/94230402 0.0% 21/302 7.0% 27651101 NA +6461 chr4 + 190214555 54737169 54737168 54737286 118 TTGCAGGTATGACATAATGAAGACTTGCTGGGATGCAGATCCCCTAAAAAGACCAACATTCAAGCAAATTGTTCAGCTAATTGAGAAGCAGATTTCAGAGAGCACCAATCATGTGAGT chr4 - 94230402 27086327 27086326 27086444 67143959 67143958 67144076 118 TCGCAGGTACGACATAATGAAGAGTTGCTGGGATGCCGATCCCTTGCAGAGACCCACATTCAAACAGATCGTGCAGCTGATAGAACAGCAGCTTTCCGATAATGCCCCCCGGGTAAGT .:.......:.............x............x......:.:x.:.....x........:..:..:..x.....:..x..:x.....x....x..x.:::..xx:.:x..:... 118M 89/118 75.4% 118/94230402 0.0% 0/118 0.0% 27650842 NA +14070 chr4 + 190214555 54740191 54740190 54740709 519 TCTGGAAGTAACCATTTGCACTGGAGTT--CTATGCTCTCGCACCTTTCCAAAGTTAACAGATTTTGGGGTTGTGTTGTCACCCAAGAGATTGTTGTTTGCCATACTTTGTCTGA-------AAAATTCCTTTGTGTTTCTATTGACTTC---AATGATAGTAAGAAAAGTGGTTGT-TAGTTATAGATGTCTAGGTACTTCAGGGGCACTTCATTGAGA---GTTTTGTCTTGGATATTCTTGAAAGTTTATATTTTTATAATTTTTTCTTACATCAGATGTTTCTTTGCAGTGGCTTAATGTTTGAAATTATTTTGTGGCTT-TTTTTGTAAATATTGAAATGTAGCAATAATGT-CTTTTGAATATTCCCAAGCCCATGAGTCCTTGAAAATATTTTT-------TATATATACAGTAACTTTATGTGTAAATACATAAGCG-GCGTAAGTTTAAAGGATGTTGGTGTTCCACGTGTTTTATTCCTGTATGTTGTCCAATTGTTGA----CAGTTCTGAAGAATTCTAATAAA-ATGTACATATATA chr4 - 94230402 27089194 27089193 27089717 67140686 67140685 67141209 524 TCGAGAAGTAGCCATTTGCACTGAACTTACTTAGGCTGTTGCACCTTTCCAAAGTTAGCCAGTTGTTTGGAGGCACTCTTATGCATAC--TTGTTGTTGAGCATTTTCAGTTTAATGCTATAAAAGCTCTTTCGTAGTG-TGTTGGCTTTCAGAGCAACTGTAGACAAACTAGTTTTATAATCATAGATGTCTTGGTACTTTATGGACATTTAGCTGAAAAAAGTTTGGGTTTTTTCTTTCttaaaa-tttatatttttataatttGGGGGGGGTTGAAAC-TTATTTTGCAATGGCTTAGTGTTTGAA-TGGTTTTATGCATTGTTTTTGTAAATATGGAAATGTAGCAATAATGTCCTTTTGACTATTCTC-AGTCCTTGAGT-CTCaaaaatatttttatatatatatatatGCAAAAACTATATGTATAAATATGTAAGTGTTCAAAAGTTTATGAAACACTTATG------------------GATATGTTGCTCGGTTGTAGAATTGCAGTTCAGAAGAGTTCAAATAAATCTGTAAATATGTA ..x:......:............:.x..--:..x...x.:.................:.x::..x.xx..xx.:::.x.:.:x..x:x--........x:x...x:.:x..:.:.-------...::..:..:..:x.x-.:...:...:---.:::.:x...::x...x.:...x.-..:.:..........x.......:.x..:..:..x::...:.---....x.x:..xxx:x.....:...-..................xxxxxx:xx.x.:.:-..x:......:.......:........-.x:....:..xx..-.............x..................-.......x.....:.-..:..x.....-..::...........-------.......:..:x....x.....:......::....:.-x.:x.......x:::.:::.x:..------------------x:.......::.::....x..----......x.....:...x......-x....x....:.. 28M2I58M2D25M7I17M1D10M3I24M1I42M3I24M1D33M1D27M1D14M1I32M1I15M1D11M1D15M7I37M1I24M18D21M4I23M1I13M 354/493 71.8% 524/94230402 0.0% 57/493 11.6% 27650997 NA +3392 chr4 + 190214555 54765866 54765865 54765956 91 TCTCTCTCTCTCTATATATATACATATGTG-----TATATATATATATATATACACATATGTGTATATATATATATATACACATATGTGTATATAT chr4 - 94230402 35554927 35554926 35555022 58675381 58675380 58675476 96 TCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ...:...x...:..:.xx.x..x:...:x.-----.....x.:x:.:.:.:.:........x..:.........::.....x.x.......x.x.. 30M5I61M 64/91 70.3% 96/94230402 0.0% 5/91 5.5% 19210939 NA +3086 chr4 + 190214555 54765954 54765953 54766021 68 TATATATATACCCACAAATACACATGTACATATATATATACCCACACATACACATATATACATGTATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xx...:.x..::.:..:x.....:..:x.:.:x::.x.........:..:......... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 6598916 NA +3148 chr4 + 190214555 54768392 54768391 54768458 67 TGTGTGTGTGTGTGTGTGTGTGTAGGTCAATGTATCTATTTATACATTTATTTATATCTATTTATAT chr4 - 94230402 6864197 6864196 6864263 87366140 87366139 87366206 67 TGTGCACACATGTACACGTGTATAGGTCTCTTTCTCTAAGTATATATGTATTTATATCTATTTGTAT ....::::::...::::....:......xx.x.x....xx....:..x...............:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 47904195 NA +3485 chr4 + 190214555 54786616 54786615 54786689 74 CTGCAGCCTCGAACTCCTGGACTCAAGCGATCCTCCCACCTCAGCCTTCCAAGTAGCTGAGATTTTACGGGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.:..:....::.....:.x.:.x.xx:x.........:..........::.:.x:...x.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 36589490 NA +4941 chr4 + 190214555 54793393 54793392 54793491 99 ATTTATCCTTACAATAGCATTCTGAAGTAGGTA----CTATTATCTCCATCTTACAGGTAAGAAAACTGAAGCTCAGAGGGGTTAAGCAACTCGCACTAGGTC chr4 - 94230402 10729160 10729159 10729262 83501141 83501140 83501243 103 ATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .....x...:......x.x:.x...:.......----....:.x......:........::.........:..x..x.x:.......:..:.:..x.x::... 33M4I66M 75/99 75.8% 103/94230402 0.0% 4/99 4.0% 44064233 NA +3242 chr4 + 190214555 54806071 54806070 54806167 97 GGACAAAAAGAACATTAAAAAAGAAAGAAAGAGAAAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAG------AAAAAGAAAGAAAGAAAGAAGAAAGA chr4 - 94230402 45355434 45355433 45355536 48874867 48874866 48874969 103 GAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGA .:.x.x......x.:x.:.:...:...x..x...x.........x:::x:.:..:x..:.:.:...x....------.......:.x.x:x:.......:... 71M6I26M 65/97 67.0% 103/94230402 0.0% 6/97 6.2% 9450637 NA +3353 chr4 + 190214555 54806073 54806072 54806198 126 ACAAAAAGAACATTAAAAAAGAAAGAAAGAGAAAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGAAAGGGGG chr4 - 94230402 65303692 65303691 65303808 28926595 28926594 28926711 117 ACTGATAGAAAACTAACATATATAAAAAGATAAACAGAATGAAGAATGCAATTACAGGCTTAAAAAAAAAAAGAAAAAAAAACACAGTAAAAAGCCATAAC---------AAAGAAATAAAGGCGG ..x:.x....x.:...x.x.x.x.:.....x...x....x....:.x.x..xx.x..:xxx...:...:...:.:...:...x.x..x.:....x..x..x---------.......x.....x.. 101M9D16M 80/117 68.4% 117/94230402 0.0% 9/117 7.7% -10497619 -83732783 +3671 chr4 + 190214555 54806123 54806122 54806292 170 AGGAAAGAAG--------GAAAGAAAGAAAAAGAA---AGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGA-------------------AAG-----------AAAGAAA--------GGGGGAGGGAGAGAGGAAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGA chr4 - 94230402 30232025 30232024 30232242 63998161 63998160 63998378 218 AGGAAAGAAATGGTCTCTGAAAGAGAGAAAAGGAAGTCAGAAAGAATAATAAAAGTCGGCATGGTAAAGGGCCTCTTACTCTCTGTGGTCTAAGTTTTATGTTCTAAGTAAATCTTTCATAGAAGGTAGAATGAGGTTAAAGGGTAA-AAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAA .........:--------......:......:...---........x:.x:....x.:.x.x.:x.:....x-------------------...-----------..:x...--------:.::.:x:..:x....xx......x.:-.....x:.::..x......:..xx...:.......x..x...:.:.:...:.x:x:.::.......:..:. 10M8I17M3I34M19I3M11I7M8I27M1D71M 117/169 69.2% 218/94230402 0.0% 50/169 29.6% 24574098 NA +4593 chr4 + 190214555 54806196 54806195 54806445 250 GGGAGGGAGAGAGGAAAAAGGGAAGGAAGGGAAAGGGAAGGAAAG-----AAAGAAAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGA--------AGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGA chr4 - 94230402 75014838 75014837 75015097 19215306 19215305 19215565 260 GAGACAGAGGATAGAAAAATATAAGGCAGAAAAAAGTCAAGAGAAGCCTTAAAGGATGGCAAAAGAAATAAAAA--GAAGCTGGAGAATACAGAACTCAAGAAACA-AAAGAATAAAGAATTGCTAGAATTAAAAAAAAAAAAAGGGGGGGGGGAGGGGGGGGTTGCGGGTGCCAGGGAGAATACGCTAAAAGATGAAAGTGGAATATTCATAATTAACAAGAAAATAAAATAAAAATTTACCAACAGAGAGGAAGGCAGAGA .:..x:...::x:......x:x....x..::...:.xx.:..:.:-----....:.x.:x:..:....x...:.--....xx:.::..x.x:...xxx......x.-......x:.....xx:.x::..xx..:.:::...:..:.....:.......:...:xx:x..:x.xx.....:.:x:x:xx...::.x.....x:..--------.:xx..x..::...x....x.:...xxx.xx:.x..::.......x..:.. 45M5I24M2D30M1D97M8I51M 148/247 59.9% 260/94230402 0.0% 16/247 6.5% -20208642 -74021760 +3477 chr4 + 190214555 54806197 54806196 54806369 173 GGAGGGAGAGAGGAAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAA-AGAAAGAA----------GAAGGAAAGAAAGAAGGAAGGA-AGGAAAGAAGGAAAGAAAGAA---AAAGAAAGAAAG------AAGAAAGACAGAAAGAAAGAGG------------GAAAGAAAGGGGGAGGGAG-----------GGAGGGAAAAGGGAAGGAAGGGA chr4 - 94230402 4547797 4547796 4548013 89682390 89682389 89682606 217 GAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA .:::..x.:...x.:...x.xx..:x.x:....:x..::..x....-.:.:....----------..............:.:.....-xx.....x..:..x:......---.:...:.x..:.------..:.x...x.x...xx..x..:------------......:....x..:x:..-----------:...::....::.x..x...... 46M1I8M10I22M1I21M3I12M6I22M12I19M11I23M 120/173 69.4% 217/94230402 0.0% 44/173 25.4% 50258400 NA +3092 chr4 + 190214555 54806223 54806222 54806300 78 AGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAAT-----GGGCAAAAATAAGCCACAGAAAATGGAA .....::...::...:....:..........::..........:x-----:..x..:..x:.:xx.x......x.:.. 45M5D28M 52/73 71.2% 73/94230402 0.0% 5/73 6.8% 10405727 NA +3318 chr4 + 190214555 54806234 54806233 54806360 127 AGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAGGAAGGAAGGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGGGGGAG--GGAGGGAGGGAAAAGGGA chr4 - 94230402 83348735 83348734 83348863 10881540 10881539 10881668 129 AGAAGAAAAAAAAAAAAAGAGCACAGAAAATAAAATGGGAGAAATGAGAGAAACACATGAGATAACAGAAGCTATCGGTACCTGAATTCAGAGGGAAAGGGAGGAGGAGCAGATGGGAGAGAAAGATGA ..:.:.:...:...:..::..x.x.....:x.::.x..:..:..x..::....x.x.x:.:.x:.x....:xx.xx::x..xx:..xxx..........::...:....--.:x.....:....::x.. 109M2I18M 77/127 60.6% 129/94230402 0.0% 2/127 1.6% -28542501 -65687901 +3014 chr4 + 190214555 54806300 54806299 54806361 62 AGAAAGAAGAAAGACAGAAAGAAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAA chr4 - 94230402 73085396 73085395 73085457 21144946 21144945 21145007 62 AGAAAATATTAATGTAGGAAGGAAGGGGAAAAAAAAGGGGGAGGGGGAAGAGGAGAAAAGAA .....:x.xx..x::..:...:...:..:...:............:.::::...:..::... 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% -18279096 -75951306 +3015 chr4 + 190214555 54806314 54806313 54806434 121 CAGAAAGAAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAG chr4 - 94230402 65224894 65224893 65225014 29005389 29005388 29005509 121 CAAAGAATAAGCAAACAAGGAATGGAGAGGGAGGGAAGTAAGTCAGAACAGAAAGCATGAAGTCAAGAGAATAAAAACAGTACAAAAGAAAGGAAAATGAATAATCTGGGAGGAAAGAAAG ..:.:.:x...x:::x...:..x..:..........:.x..:xx:...x::.::.x.x.:::xx:.:....x:...:x..x.x:........:..:.x:..x:.xxx:.:.:.....:... 121M 69/121 57.0% 121/94230402 0.0% 0/121 0.0% -10418580 -83811822 +3404 chr4 + 190214555 54806317 54806316 54806406 90 AAAGAAAGAGGGAAAGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGA chr4 - 94230402 76099077 76099076 76099163 18131240 18131239 18131326 87 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGA---AGAGAAGAATGAAAAAACGA .:........:::.:.x:....xx:.........x...:.:.:....::.:.xxx.:.:...x.:..---.:.......x....:..x.. 67M3D20M 59/87 67.8% 87/94230402 0.0% 3/87 3.4% -21292760 -72937642 +4728 chr4 + 190214555 54806331 54806330 54806538 208 AGAAAGGGGGAGGGAGGGAGGGAAAAGGGAAGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAAGGAAGGGA----------GAAGGAGAGAGGG---AGGGAGGGGAAAAAGG-AAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAGAAAAAAAG chr4 - 94230402 8437549 8437548 8437769 85792634 85792633 85792854 221 AAAGAGGAGGAGGAAGGGAGGGAAGGGATTAACGAGGCAGAGTAGAGAAATGAATTTGAGAAGAAAACATGAAAAACATGTACAGGAAAAAGGCAGAGA-GAAGAAGTGAAACGAGTATTTTAATGACGAAGAGTAAGTTTAGAGAAAGGAAAAAGACAACTCAAGATGAAATGAAATGGTGTGAAAACTAAGAAAAGACATTTAAAGAAAAAGAGAAACAG .:.:...:.....:..........::.:xx.:x:...x.:..x::..:..x...xxx:.......::x.x....:.x.x:x.x.:....:..:x...:.-....:.:x...:x..----------..x.:....x::.---..:..::........:-..xxx.::.x.:..x....x..x:x::...xx......::.x.xxx.....:.....:...x.. 99M1D15M10I13M3I16M1I64M 130/207 62.8% 221/94230402 0.0% 15/207 7.2% 46368782 NA +3096 chr4 + 190214555 54806361 54806360 54806433 73 AGGAAGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:....:::....::...:.......::..:..:........x:::x.....x:.:xx.x.:.:..x.... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 10405865 NA +3380 chr4 + 190214555 54806365 54806364 54806437 73 AGGGAAAGGGAAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGAAAGGAAGGAA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA .....::...::...:....:..........::...........x:::x..:..x:..xx.x.:.::.x.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 10405869 NA +3023 chr4 + 190214555 54806375 54806374 54806427 53 AAGGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAGAAAAAAGAAAGAGAAAGA chr4 - 94230402 299356 299355 299408 93930995 93930994 93931047 53 AAGCACAGAAAAGAAGCAGCAGGAAGGAAAGAAAAAATAAAGGGAGAGAAAAA ...x.x.....::...x..x.....:........:..x....::.......:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 54507019 NA +3174 chr4 + 190214555 54806441 54806440 54806529 89 AGGGAGAAGGAGAGAGGGAGGGAGGGGAAAAAGGAAGGAAGAAAGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGAAAGAGAAA chr4 - 94230402 7739259 7739258 7739345 86491058 86491057 86491144 87 AGAGGGAAAAACAGAGGGGGGG--GGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA ..:.:...::.x......:...--........::...:....:.::.x.x.:::..:::.xxxx....:...:..:...:...xx.... 22M2D65M 57/87 65.5% 87/94230402 0.0% 2/87 2.3% 47067182 NA +3260 chr4 + 190214555 54806484 54806483 54806546 63 AGGAAGGAAAGGGAAGAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAG---AAAAAAAGTTGCAGAA chr4 - 94230402 44400496 44400495 44400561 49829842 49829841 49829907 66 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAA ...:...:::...:......:.......::..:.........:.x:.---....x...:::..... 47M3I16M 47/63 74.6% 66/94230402 0.0% 3/63 4.8% 10405988 NA +6550 chr4 + 190214555 54819079 54819078 54819419 341 GGTCATGTTTTTGACTCTAGCAAGAGGAAACAAGG-GGCCTTCAGTGGGAAAGC-AAGAGGTTTCCAGTGCTCACCAAATACAGATGCTCAGGAAATGGGGGACTCATGTGGCTTACATATAGGGAACTTCACAGCTAAAATACCATGTCCTGTGTAGGAGGCCCAGATCACTTCTCGGCGTGTCCCAGCCTGCCTGCCTCCAA---ATGTCCTCTGGAATAATTCAACTTCTTATCTAAGGTACGAGCCAGCTTCCTTGAACT-------------GCCAACTGCT------CGATTGCACAACAAATCGGTTATATAAGAGGATCTTAAGAAAGAATAAAATCATGAGCACCCCATAATTGCC chr4 - 94230402 27103667 27103666 27104014 67126389 67126388 67126736 348 GGTTATATTTTTAGCTCTGCAGAAAGGAAGCCAGAAGGCCTTTGCCGGGCAGGCTGCGGGGCCCACCGATCCCATGAGCTACAGATGCTCAGGAAGCCAAGTGCCCATGCAGCTTGTGCATAGGAAGCGGTGCCTGCCAGCTGCC---TCCCGTG----GGGCCCTGTTAG--TCCTGGCCT-------CCTCCCCATCTCCAGCCCGTGTCACCGCGCTAACCCCCACTGCTTATCTAAGGTA-GGGCCGGCTTCCTCACACTCGCCTGGTGTGTGGCAACCTGCCGCTGTGTCATTGCACAACCCCACAGTTACATAAGAGGGTCTTAAGAAAGGGTGGGATGAAGAGAAGCGAGTAACTGCC ...:..:.....::....:xx:.:.....:.x..:-......::x:...x.:..-:x.:..:::x.x.xx.:..:x.:x................::x::.x:.:....::....::::.....:.:.xx::.xxx:x.:x.:..---...:...----:.....x.x.x:--..::...x.-------...x..:::.....:---:....x:.xx.xxx.x::.x...x.............-.:...:.......::x...-------------..x.x....:------:x..........xxxx.:....:........:...........::.:::..x.x...x.x.xx:...:.... 35M1I18M1I90M3D7M4D12M2D9M7D15M3I37M1D19M13I10M6I72M 206/324 63.6% 348/94230402 0.0% 41/324 12.7% 27715412 NA +6405 chr4 + 190214555 54847236 54847235 54847512 277 TGGCACCACTTCAAGTCCTATTTTTTAACCCCTTTAAGCCAGGCCAGAAACATTGCCAGTGAGTGTGACACAGTGATGCAAAATGCATTAAGCTTTTACAGCAGAGCCTCAAGACCCCCAATGGCATCAAGAGATTAAT--AATTGGAGTAAGAAAGATAGATGTATTTT----ATGAATAATTCAGTCTATCATTAGAAATTAG--AAACTTGAGAGCCTTGCTACATGGGAG-AGTAAACAGAAGCTTGCCTTAATGGGTTA---TAATTTTAAAATGAGGAAGACT chr4 - 94230402 27105008 27105007 27105286 67125117 67125116 67125395 279 TGGCATTAAGCCAGAGCCTGTTATT-AACTCTTTAGTGGCTGAACACAGATTTTTCTAGCATGAGCTACACACTAATGCAAAGTGCATTATGCTTTTATGGCAAAA---------TCCCAACAGCACTAAGAGGTTAATTAAACTAGAGAGAGGAAAATAAAGAGGCTTTTAAAATGAATTATTCAGGAGATCATAAAAAATCAGGCACACATGAGAAGCATGATACTTAGAAATCCTAAATGTAAACATGCATTCATGGATTAATGTAAGATTAAGAAAATAAATACT .....::.xx:..::x...:..x..-...:.:..x:x.x.x.:x..x.:.:x..x.:..::x.x.:x.....x.:.......:.......x.......::...:.:---------:.....::...::.....:.....--..:.:...x:..:..:...:.x:x::...----......x......xxx.....x.:....:..--.x..x.....:x.x..x...x.:.:.:-xx....::x..:.x...x..x....:...---...xx....:.x:.x:..x... 25M1D80M9D24M2I29M4I31M2I27M1I29M3I22M 175/267 65.5% 279/94230402 0.0% 22/267 8.2% 27742228 NA +3615 chr4 + 190214555 54848683 54848682 54848790 108 GGGTTCGGATCCTGCCTCTGTCACTTACCAGCT--ATGTAACTTTGAACATGTTACTTAATTTCTCTGTGCTTCAGTTTTTTCACCTGTAAAATAGGGGTAATAACACTA chr4 - 94230402 10384312 10384311 10384417 83845986 83845985 83846091 106 GAGTTCTATTCCTGGCTCAACCAC----CAGCTCAATATGACCTTGGGCAAGACGCTTAGTTTCTTTGAGCTTCAGTTTGTACAGCTGTAGAATTGAGTAAAAAAAATTA .:....x:x.....x...x::...----.....--..:.:..:...::..x.x::....:.....:..x..........x.x..x.....:...x.:.xx..x..x.:.. 24M4D5M2I75M 73/104 70.2% 106/94230402 0.0% 6/104 5.8% 44464371 NA +3698 chr4 + 190214555 54851022 54851021 54851124 103 AGAATGATTATTATCCA-ATTCTATAGGTGAGGAAGCTGAGGCCCAGAGAAGTTGGGTAACTTACCCCAAGTCATACTGCTAGTCAGTGGCAAAGCTAGTATTC chr4 - 94230402 15193213 15193212 15193316 79037087 79037086 79037190 104 AAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTTATAGTC .:...x......x....-...:....xx..::.:.::...::.:....x..:.x:::......x..:x.:.......x...x.....x:::...::.x:..x.. 17M1I86M 68/103 66.0% 104/94230402 0.0% 1/103 1.0% 39657809 NA +4104 chr4 + 190214555 54869616 54869615 54869689 74 TGCAGCCTCAAACTCCTAGGTTCAAGTGATACTCCCACCTCAGCCTCTTGAGTAGCTGGGACTACAAGTGCACC chr4 - 94230402 18197127 18197126 18197200 76033203 76033202 76033276 74 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC .:.....:x..:..:..:..........x.x.x.xx:x........:.::.........:......x....... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 36672489 NA +3376 chr4 + 190214555 54874525 54874524 54874583 59 AAAAAAAACAAAAAACAAAACAAAACAAAAAAAGAAAATAGCAAAGTACAGCCACATGC chr4 - 94230402 21291814 21291813 21291872 72938531 72938530 72938589 59 AAAAAAAACAAAAAACAAAACAAAACAAAAAAACAACCGAGCATATTATCACTATATAC .................................x..xxx....x.x..:x:.:.:..:. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 33582711 NA +3367 chr4 + 190214555 54878377 54878376 54878437 61 TATAGTGCCTAACACTGATACTGCATTTCTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929887 18929886 18929947 75300456 75300455 75300516 61 TGTACTGTCTGCAGATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:..x..:..:xx:x........x......:.:.:...:...:.:................ 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 35948490 NA +3112 chr4 + 190214555 54921207 54921206 54921290 84 CTATCTCTTTTTCCATCTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCT----TTTCTCTCTCTT chr4 - 94230402 18988806 18988805 18988892 75241511 75241510 75241597 87 CCACTTCATTGTCCCT-TATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT .:.::..x..x...x.-.x.x.:..x......:.xx.:..x...:..........:............x...----..:..x.:..:. 16M1D55M4I12M 61/83 73.5% 87/94230402 0.0% 5/83 6.0% 35932401 NA +3038 chr4 + 190214555 54921229 54921228 54921283 55 CTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCT chr4 - 94230402 15963380 15963379 15963434 78266969 78266968 78267023 55 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCT ......:.......:......:.:..:.xx:...:.....:xx.....x...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 38957849 NA +3088 chr4 + 190214555 54935612 54935611 54935651 40 AGTGTTTTTGTTGTTGTTGTAGTTTTGTTTTATTTTTTTT chr4 - 94230402 12266169 12266168 12266208 81964195 81964194 81964234 40 AGGGTTTTTGTTGTTGTTGTTGTTTTGTTTGATTTTTTTT ..x.................x.........x......... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 42669443 NA +15781 chr4 + 190214555 54942031 54942030 54942483 453 TAACGCCAGAACAAGTTT----------GAATCAA----AGAAATGACACATACAGTGGCCAGATGTTTGGAGAATAAGAAAGGGAGCTAAGTTCACACAATTGTTCTGCCTTCTT-GCTTTCCGCTGAGGTTCTTTCCTGTGAGCTGTAGGACTCATTAACAGACAGCTCTGCTCTGGGCAT-----GCACACCGACAGCCTCAGCCTAGCCCTTCAGCGAGAGGCTGCTAACAGGCGGCCTTCCTTTTCCTGTGCAGCTGGTGTTTGCAGAAGGACATGATTTGAAAGTTGATTTATTTACCCTG-------TCTTTGAAAAAAAATGAATGGACATAGATGT-CTGTTTGTTA------------AAACAATTAATAAACTCTAATAATATGATTA-GAATTTAACAGAAAAACATCGTTGGCTTGCAGGTGGAAATCCAAGGTCTTCAACTTTTAGG-ATGTTCATCATGTAGCTGTCTCACTCAGAACAA chr4 - 94230402 27113566 27113565 27114052 67116351 67116350 67116837 487 TAATGCTTGGGCAAGTTTTTCACCAAATAAACCAAGTGAATGAATGAAATGTTCAGAGGCCAGATGTTTTCAGAATAAGATGGGGTGTTCAGTTCACACAATTGTTCTGCTTTTTTTGTTTTCCTGCACAGTTCTTTCCTGTGGAGTGTAGGATATATTAACTTGCAGC----CACAGAGCACTTGAAACGCATCTACTGGCTCAGCCCAGCACATCAGTGAGAGATGGCTAACAG----TCTTCCTTTTCCTGTGCAGCTGTTGTTTGCAGAAAGGGATAATTTTTAAGTTGATTTATTTACCTTGGGCATTTTTTTTTTCTCTTAATCAGTGAACATCAGCATGCTAATTGTTACTAGTGGCTTTGAAACAATGAATAAGCCTCATTGATACAATTATGACGGTAATAGAAAAACATCCTTGACTTGCAGGTGGAAAGCTAAGAACTTTTGTCCTCAGGAATGTTGATATCGTAGAGTTCCCAGGtaaaaaaa ...:..:x.::.......----------:..:...----.x:.....x.::.x...x............xx.........x:...x.:.x....................:..:..-.:.....xx::x:.............::x.......:x:......xx:....----.x.x.:...:-----:.:..:.x..x.x.......:...x.x....:.....::x........----:.....................x...........:.:x..:....xx.................:..-------.:...xxxxxxx...x.:..:....x::::.-..:x......------------.......x.....:.:::.x.:...::....-..xxx...:...........x...:..............x.:...:x...:x::::.:...-.....x..xx:....xxx..:..xx:.:..x.. 18M10I7M4I77M1I52M4D10M5I48M4D67M7I31M1I10M12I31M1I61M1I33M 323/445 72.6% 487/94230402 0.0% 50/445 11.2% 27828465 NA +3058 chr4 + 190214555 54942730 54942729 54942772 43 TCTCAAAAA-AAAAAAAAAAAAACAAAACAAAACAAAAAAACAG chr4 - 94230402 1220214 1220213 1220257 93010146 93010145 93010189 44 TCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAG ......:::-...........................:...... 9M1I34M 39/43 90.7% 44/94230402 0.0% 1/43 2.3% 53722516 NA +3608 chr4 + 190214555 54942737 54942736 54942825 89 AAAAAAAAAAAAAAACAAAACAAAACAAAAAAACAGCTGATCA-GTTCTTGTTTTTTA-CTCTACA-GCCTTTGAGTCATGAATGAAGAAAA chr4 - 94230402 21291814 21291813 21291905 72938498 72938497 72938589 92 AAAAAAAACAAAAAACAAAACAAAACAAAAAAACAACCGAGCATATTATCACTATATACCTTCACATTCCTTGGAGGTGGGAATAAAAAAAA ........x..........................:.:..x..-:..x.:::.x.x..-..::...-x....x...x::x....:..:.... 43M1I14M1I7M1I25M 68/89 76.4% 92/94230402 0.0% 3/89 3.4% 33650923 NA +3085 chr4 + 190214555 54954180 54954179 54954237 58 GTTTTTTTTTTTTTTTTTTTTTGGTTGTTGGTTTTTTTTTTTTTTGGTTTTGTTTTTT chr4 - 94230402 39399621 39399620 39399676 54830727 54830726 54830782 56 GTTTCTTTCTTTCTTTTTTTAAGTGTGTGGGTTTTTTTTTTTTTTG--TTTGTTTGTT ....:...:...:.......xx.xx...x.................--.......x.. 46M2D10M 47/56 83.9% 56/94230402 0.0% 2/56 3.6% 15554559 NA +3486 chr4 + 190214555 54954183 54954182 54954304 122 TTTTTTTTTTTTTTTTTTTGGTTGTTGGTTTTTTTTTTTTTTGGTTTTGTTTTTTGTTTTTTTTTTTAACTCTTTGTCCT-------------------------GTATGGTTCTGAAGGCAATGGCAACCATGACATAGACATCTT chr4 - 94230402 82822554 82822553 82822699 11407704 11407703 11407849 146 TTATTCTTGTTTTGCTTTTGGGGTTTGGGGCTGTTTTTTGTTTGTTTTGTTTTGTTTGTTTGTTTTTCACTCTTTGATTTTTTTATGCTCTCTCAACTTTATGAGGCATTTTCCTGGAGACAGTGAGCTCCATGAC-TAGGCATTTT ..x..:..x....x:......xxx....xx:.x......x..x..........x.x.x...x.....x........x::.-------------------------.:..xx.:...:..:..:..:xxx.......-...:...:.. 80M25I31M1D10M 86/121 71.1% 146/94230402 0.0% 26/121 21.5% -27868371 -66362031 +3072 chr4 + 190214555 54954191 54954190 54954246 56 TTTTTTTTTTTGGTTGTTGGTTTTTTTTTTTTTTGGTTTTGTTTTTTGTTTTTTTT chr4 - 94230402 89732297 89732296 89732350 4498053 4498052 4498106 54 TTTTCTTTTTTGGTTGTTGGTTTTTTTTTTTTTT--TTCCCCTCTCTGCTTCCCTT ....:.............................--..::x:.:.:..:..:::.. 34M2D20M 43/54 79.6% 54/94230402 0.0% 2/54 3.7% -34778106 -59452296 +3848 chr4 + 190214555 54997960 54997959 54998042 83 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCTTGCCTCAGCCTTCCAAGTAGCTGAGATTACAGGCGCCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:...........:.x...x.xx.x.........:..........::.:....--..:x......::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 36800834 NA +4927 chr4 + 190214555 55005145 55005144 55005395 251 CAGCATTGTTCAGCCTGACAGATGACCCAGCCTCCTGGTTTTCTTAAAATAACAAGAGAACATTTGCTCTCTGGAAATACAAGGTCGCAT-CCAAATTTAAAGAAGAAAAATAGGAGAGGAAAGCATTCAAACAAAACTCTTGGAATT---GGGCTCCTGTGGTAACATTTGGAATAAAGGAAAACAGGAAAGCAATTGCAATATTAAAAATAGATGATTTCCTGCATGTAAATTCTTTGCTGACCTTGTTGATT chr4 - 94230402 27130416 27130415 27130643 67099760 67099759 67099987 228 CAGTGTTGTCCTGCT---CCGCTGACATAGTGCAGAGGCTTTCTTAAAATAAATAACAAATGCT-GATCTCT----CTCCCTGATTGCATACCGTGTCCAAGGAAAAAATA---------AATGCTT-------AAACCCTTGAATTTCACAGGCAC---TGGAGAAATCTTGGCCAAAAGAAAACAGGAAAGCACTTGTAACATTAAAAATAGATTGCTTCCTGGAAGTAAGAATCCTGATGGTCTTGTTGACT ...::....:.x..:---.x.x....x:..:x:xxx..:.............xx.:x:..:::.-.x.....----x.x.xx.:.:....-..:x:.::..:...:...x.---------..x..x.-------....:....:.x..---:...x.---...x:.x..:.x.:x:...:...............x...:..:.............x::......x.x....:xx:::..x..::........:. 15M3D46M1D7M4D14M1I20M9D7M7D14M3I6M3D95M 151/224 67.4% 228/94230402 0.0% 31/224 13.8% 27874729 NA +3023 chr4 + 190214555 55011758 55011757 55011830 73 GTTGAATGACTTTGCACAAGTAATGTGGCCTCTCTGTGCTTCTGTTTCTTTCTCTGTAAAATGAGGTTAATAG chr4 - 94230402 42976382 42976381 42976454 51253949 51253948 51254021 73 GTTGGGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGATAAATGG ....::...:::..:::....x.:x.x:.....:x:x..:.:......:..:....x......:.:.x...:. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 12035376 NA +6461 chr4 + 190214555 55012999 55012998 55013159 161 TCCTGGAACTATAGCCTAA-TACCCATGAAATT----GTTTTTTCACGCCTAA-TAGTGTCCTCACCCTGCGTGCTGGATAAACAGGCGCTGAAGTGGTTTCTATGCCAGGCTTGTTTTCCTTCTGAAACATGATCCTTAAAGTAACTTCAGAAAACAGAAGGTCAA chr4 - 94230402 27132440 27132439 27132606 67097797 67097796 67097963 167 TCCCTGAAATATCGACTGACTCCCCATGAAATTAAGTGTTTATACACATCTAAGTTGTGTCCTCATACTTTGGCTTGGATAAACACTAACCAAAGTGGTTTATATGCTGAGGTTGTTTTTCTTCAGAAAGATGATCCCTAAACTAACTTCAATCAAGAGAAGTGCAA ...:x...x...x.x..:.-.x...........----....x.x...::....-.x.........:x..x:.xx:..........xxx:.::.........x.....:::.x.......:....x....x.......:....x........:xx..x.....xx... 19M1I13M4I16M1I113M 120/161 74.5% 167/94230402 0.0% 6/161 3.7% 27880559 NA +9358 chr4 + 190214555 55020948 55020947 55021164 217 GGTTGTAGTGGTAGCA-TCATAGACCTCAAAAGCATGTTGGAAGTTGACCCCAATTAACACCACTGGGCATACTCAGTTTAGCTGTAATATCATGTAACTGCTACAACATCCTTAAGACCCCAGGTTCTGTTTTCCAGGGTGACTGATGACAGTTTTGTTTTCAGAACAAACAAGTAGAGT---GGGATAAGGATTCCCAGTGGATATTTAGTCTCTAGAG chr4 - 94230402 27134527 27134526 27134747 67095656 67095655 67095876 221 GGTTGTAATGGTAGCAATCAGAAGCCAATAAAACACATCTGATGCTGACCTCAATTAACACTAACACGCACTCTCATTTTAGCAGCAATATCAAGTGACCTCTACAACATACTTATAGCCCGGAGCTCTGATTTCAAGGGATGCTGGTGACAGTTCTGTTTTGAAAACAAACAATTAGAGGCCACAAATCAGGATACCAAGTTGAAATGTGGTCTCCTGAG .......:........-...x.::..xxx...:..::.:x..x.:.....:..........:.x::x...:x....x......x.:.......x..:..:x.........x....x::...x::.:....x....x....xx:...:........:......x.:.........x.....x---x::..x.....x..x...x..x..x.:.....:x... 16M1I164M3I37M 157/217 72.4% 221/94230402 0.0% 4/217 1.8% 27886421 NA +3040 chr4 + 190214555 55067064 55067063 55067194 131 AACCTTTCTCAAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTC chr4 - 94230402 48781248 48781247 48781378 45449025 45449024 45449155 131 AACTTTTTTAAAAGTGTTGGTTCTCAAGACTTTCATTCTTGCCCTTATTCTTTATTAAACTTCATTTATCTCATCTCTGTTTTGGGTTTGTTTTTTTTTTTTTTTTTGAGGGTTGTTATTTCAACATTTTC ...:...:.x..::.x..:x....:xxxx....:x:.:.:x:.:..x:.:...x..xxx...:x...x.:.:x.:.:.x....xxx...x.................xx.:.x..xx:.....x:x..x.. 131M 79/131 60.3% 131/94230402 0.0% 0/131 0.0% 6285816 NA +3042 chr4 + 190214555 55067069 55067068 55067155 87 TTCTCAAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 48781268 48781267 48781354 45449049 45449048 45449135 87 TTCTCAAGACTTTCATTCTTGCCCTTATTCTTTATTAAACTTCATTTATCTCATCTCTGTTTTGGGTTTGTTTTTTTTTTTTTTTTT .........:...xx.....x::::.x..::..x:.xxx:...x...x::.:x...:.x....xxx...x................. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 6285801 NA +3129 chr4 + 190214555 55067070 55067069 55067174 105 TCTCAAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 45185609 45185608 45185713 49044690 49044689 49044794 105 TCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAA .....:xx..:.:....x..:..::.........x.:...:x::......:..::...xx:.:..:::...:.:x:..xx.x:..:.:x:.x:..x.:...:.:. 105M 62/105 59.0% 105/94230402 0.0% 0/105 0.0% 9881461 NA +3168 chr4 + 190214555 55067074 55067073 55067154 81 AAGATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 24648093 24648092 24648171 69582232 69582231 69582310 79 AAGATTTGGCCACTTTC--ATGGTTCTCTCCTCTTTTCGTTGTCATTTTTGTCATTTTTTTTCTTTCTTTTTTTTCATTCT .......x:.:x....:--x.xx....:..:.......x..x..x....:x.:x........:...:........:x..:. 17M2D62M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 30418981 NA +3097 chr4 + 190214555 55067077 55067076 55067170 94 ATTTTACTTCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 64340617 64340616 64340710 29889693 29889692 29889786 94 ATTGTAATATTTTCTTCTTCTACTTGTTTCTTATCTTTAGCATCTGACATTTTTAAATTTGATAGTTTTTTTTTCTTTTTTTTTTCTGTCTGTT ...x..x.x:...:.....:.x...x:.....x.....xx.x.:.xx:x.....xxx...xx.xx.........:..........:.x.:.x.. 94M 64/94 68.1% 94/94230402 0.0% 0/94 0.0% -9273540 -84956862 +3134 chr4 + 190214555 55067085 55067084 55067172 88 TCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 35294589 35294588 35294676 58935727 58935726 58935814 88 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCT .:.::.:.:...::...x.x.:x......:...:...x....:..x....::..::.:..:x.....::..xx.:x:.x....:..:. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 19772496 NA +3223 chr4 + 190214555 55067085 55067084 55067169 85 TCTTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 51995564 51995563 51995648 42234755 42234754 42234839 85 TCTTGTTTTATCTACTTTCCCTGTTTCTTATTAATCTTGCTTCACTTTTTTTTTATTTTTCTTTTTTCTTTAATTACTTTGCTTT ....x...:x.:.x.....:::x......x..xx.:..x:..:x:.........x.....:......:...xx..x:...x:... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 3071521 NA +3162 chr4 + 190214555 55067087 55067086 55067148 62 TTTTTTCTTTTTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193311 40193310 40193372 54037031 54037030 54037092 62 TCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT .:......:.:...x....:.x:..:.:xx.:..:x.................:.....::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 14873776 NA +3214 chr4 + 190214555 55067096 55067095 55067190 95 TTTCTTTCTTCTTTTCTTTTTC--TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCT chr4 - 94230402 81709496 81709495 81709592 12520811 12520810 12520907 97 TTTATTTTATCTCATTTTGTCCAGTTTTACCCATTTGTTTGTTGTTATTGTTCTTTCATTTTTTGGTTTTTTTTTTTTTCAAATGAAGCTTGATGCT ...x...:x...:x.:..x.:.--....x.::x...x...x..x..x..x..:...:x......xx.............x.:...:..:..x.:x.. 22M2I73M 66/95 69.5% 97/94230402 0.0% 2/95 2.1% -26642400 -67588002 +3076 chr4 + 190214555 55067097 55067096 55067166 70 TTCTTTCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193303 40193302 40193372 54037031 54037030 54037100 70 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ..x....x........:.:...x.:.:..x:.::.:xx::..:x:................:.....::. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 14873794 NA +3116 chr4 + 190214555 55067102 55067101 55067181 80 TCTTCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 40645439 40645438 40645518 53584885 53584884 53584964 80 TCCCTTTGGCCTTGTCTTCTTCAGCCTTTTCTGCCTTTCTTGTTTGTTTTGTTCCTTTTTTTTTTTTTCGTCAAATGGGG ..:::..xx.:..x....:...xx::....:.x::...:..x...x....x..::.............:x.x.:....:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 14421663 NA +3064 chr4 + 190214555 55067105 55067104 55067161 57 TCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 2972464 2972463 2972520 91257883 91257882 91257939 57 TCTACTCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTTTATCTGCTTT ...x:......................::.....x:..:::.x.....x.:.x:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 52094641 NA +3064 chr4 + 190214555 55067112 55067111 55067183 72 TTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTT chr4 - 94230402 50985357 50985356 50985428 43244975 43244974 43245046 72 TTTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTTCTCTTTATTCTTTTTTTCCCTGAAAAAGAGCT ...:.:....:.xx...x.:..:....xx...:...x...:.:...x..:.......:::...:.x:...:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 4081755 NA +11102 chr4 + 190214555 55068501 55068500 55068826 326 ATCCATCACTAGTTGCCATTCTAATGATCTATCAGGAAAAGATA-CCTGCCATTGATTCGGTTTCCCTGGGGTGGACTCACAGTAATTTATGAAC-------CAGCCAGAGTGTCCTCTCCTTGCGGACTTAATACGCTTAACAGCTAATTACATCTGTGTAGGGATTACACTTTACATTGTCCAGCTTTATGAAAACAAACCCTGGGCTTCCTCAGATTCCGTTAAATAGCTCCTTATCTCTAAGGCTGTGATCCTTATCAGTGCCATATGTT-TGAGCACCCGTGCAGTTTCCAAATGACTCCACGAACGTCTTCTAGGGTCTAATTAGTCTA chr4 - 94230402 27143277 27143276 27143587 67086816 67086815 67087126 311 ATTCACCATAACATGTCATTCTAACAAGCTGCAAGGCAGAGATAGTTTGCCTTTGAACCAACT-------GGTGG-----CAGTCAGTGAATAACATCTAGGTAACCAGAACACCCT-TCATCATGAACCTGATACCTTTAACAGCTAATTAAATCTGTGTAGGGATTAGGCTTTACATTGTATAGTTTTATGGTAACAAAACCCCAGCTTCCTAAGATTACTCTGAGCAGCTCCTTATCTCTGATGCTGAGATGTTTATCAGCAACATATGTTAAGAGCTCCTGCTATGTTTCCTAATGAC-----------CTTCTGGGACTTAATCAGCCCA ..:..:..:x.xx..:........::.x..::x...x.:.....-::....x....x:.:::.-------.....-----....x.x.x.xx...-------:.:.....::::...-..x.:::.:..:.:....x:..............x................x:...........x:..:......:x......x..:x:.......x.....x.x:.:.::..............:.x....x...x:.......::x........-x....x..:.:xxx......x......-----------.....:..:::....:..:.:. 44M1I18M7D5M5D15M7I15M1D156M1I27M11D22M 217/302 71.9% 311/94230402 0.0% 33/302 10.9% 27925224 NA +10996 chr4 + 190214555 55078480 55078479 55078781 302 CTTCAAGTTTTTCAATGTTCTTTAATAAAATGACA----TCAATTGCTGAAAGCATTATGACCTTTGTTATGCTACATAATACTGATACAAAATGTGAATAGTACAAAGTTCATTATATA------------TAAGGCTTTAATATATTACATTTGTTTCTACATAAACAGACTATAAATATATGTGCCATAGCATGTCTTATAGTCATTGTTCCCAGCATTTCACACTATGGTA---CCAAACAAAAAACACATTTTCTTTTTTGAAAAAAAGGACAGAACAAGGGCAAAAATCAGTAGAAATAGCTCTATATGTTAAAA chr4 - 94230402 27146296 27146295 27146600 67083803 67083802 67084107 305 CCTCTAAGTTTCCAGTCTCTTACAATAAAATGAAAAGCTTTATCTATTAAAAATGTTGTGACCCTCATAATGCTACAGAACACTGATACAGAATGTGAATAGTACAATAACCattatataatatatatatatttatattttaatatattacatttatttCTACATAAGGAGGCTATAAATA------CCGTA-TATGCCTTATATTCATGGTTCCCAGCAACTGACTTTATAGTAAGTACAAACAAACAAAATAATCC--------AACAATATAAAAATACAAAAA-AGAACTCAGTAGAAATAGCTTTACATTTTAAAA .:..x.:x...:..:.x.::.x:..........x.----.:.x:.::.:...:::..:.....:.::.x........x..:.........:................x:x:.........------------.x.x::.................:...........:x..:.........------..:..-:...:......x....x..........x:.x..x:...:...---x........x..x.:.x.::--------..x..x.x:.x.:x....:::-.:..x...............:..:..x...... 35M4I81M12I49M6D5M1D42M3I20M8D21M1D33M 212/286 74.1% 305/94230402 0.0% 35/286 12.2% 27932184 NA +4514 chr4 + 190214555 55079117 55079116 55079231 115 GAGCCTTGAGCTGAATGTCCTTTCTTT------GTGGTATTCTGAATAAAGGATCAGCCTGGGAGACAAGGAGCCAGAGCTGCATCATTTCCTTCCTGGGGCTTGGCCAGGAGACACGTAA chr4 - 94230402 27147227 27147226 27147347 67083056 67083055 67083176 121 GAGCCTTGAGGTGGAGGTTCCTTTTTTTAGTTTGTGGAGGTGCAGGCACGGGATAACTCTGAGAAACAAGAAGCCAGCGCTGTGCTGTTTCCTTCCTGGAGTCCAGCCGGGAAAAACAAAA ..........x..:.x..:.:..:...------....x:x.x:::::.x:....x.x:...:..:.....:......x....:::::............:.::::...:...:.x..:x.. 27M6I88M 76/115 66.1% 121/94230402 0.0% 6/115 5.2% 27931890 NA +8188 chr4 + 190214555 55080032 55080031 55080203 172 AAAAGTTCTGCTTCCTCACTGGAGTACACGGTGGTGTCTGTGTCATCGGAGTGATATCCGGACTGGTAGCCGCTTGTCTGGTTTGAGCCTTCAGATGCCACAGACTCCCTGCTTTTGCTGGGCACCATTCCACTGCAGAAGAAATGGCAAACAAAGGAGTTGGCAGAGAGAA chr4 - 94230402 27147805 27147804 27147971 67082432 67082431 67082598 167 AAGAGTTCAGTGTCCTCACTGGAACAGACCATGGTGTCCATGTCATCTGAGTGATACCCTGACTGGTAGCCACTTGTCTGGTTGGATGCCTCGGACATGACAGACTCATTGCTCTTGCTGGGCGCTAGTGTGCTGCAAAAGTAACAG-----ATAGGTCAAGTCAGAGAGAA ..:.....x.:x...........::.x..x:.......::.......x........:..x...........:...........x..xx.:..:..:::x........x:....:.........:.:.x.x::.....:...x..::.-----.x...xxxx.x......... 147M5D20M 124/167 74.3% 167/94230402 0.0% 5/167 3.0% 27932227 NA +5189 chr4 + 190214555 55081910 55081909 55082056 147 AAAAATTCCTATTGAAATTTGTCTTTTTAATATGGCTGAGTCTTACCCAAAAGATGG---AGATAATTTGGTTCTGTCTTCCAAAGTTTTCAGCTCTTCTGAGGCAAGAACCATACCACTGTCCGTCTGGTTGTCCTTTTTAAGAGACAA chr4 - 94230402 27148684 27148683 27148827 67081576 67081575 67081719 144 AAAATTTCATATTCAA-----TCCTTTTTGCA-GCCTGAGCCTTACCTGAAGGGTATTTTGACTTGTTTATCTCGCTCTTCCAGTGTCTTCAGCTCTTCAGATGCAAGAACCATCCCACTGTCTGTCTGGTTTTCCTGTAAAAGTGGTAA ....x...x....x..-----..:....x::.-.x.....:......::..:.:.:x---::x.x:...:x:..xx.......:x..:...........x..x...........x........:........x....x.xx...x.::.. 16M5D11M1D24M3I90M 102/141 72.3% 144/94230402 0.0% 9/141 6.4% 27933226 NA +7025 chr4 + 190214555 55082524 55082523 55082917 394 AGACGTACTTACATCTGGGATTACTTTTACTTCTGGTTCTTCTAACGGGATATCTTCAAATGTTTTTACACTCACAGGCCGGCTCTTTCGCTTACTGTTCTGCAGATACTGACTGCAAA-AGAACAAATATTTATATTTTAGTGGTGGTAT-----ATTTGACTGCAGATCG------GCTACCTAAGTTC-ATTATCTTTCAACCACAAACTTAATA--------------------GCAACCTTCAAAACATCC-----TTTAGAAAAACAA-------AACAAA------------------------ATAAAAATCTT--TCTCTG--------CTAGCACACA---------------------------------TGGAAGGCTTAATTTCCTGAGAAAGTACATTTAAAAGTATAATATAACTGAGGAGTCTCG---------ATGAGCCTGTTCTTTTGAATCCTACTTCTGAGGTCCAGTTCTGGACTAAAGACAACAACAGCAGA chr4 - 94230402 27148908 27148907 27149417 67080986 67080985 67081495 510 AGACAGTCTCACCTCCTGAACAACTTTTACAG-TGGTTA--CCAATGGGATATCTTCAAATGTTTTCACACTCACAGGTCGGCTTTTCCTTTTGCTACCTTGTCGGTACTGACTGAAAAGAAAACAAAAACAATCGCTTTGCGTCCATTATCCACAACTGGGCTGAAAACAGTACAGTGATATCGGAACCCTTTTATCTCTCTACAGAGAAATTAATCCTTCTGTCACAACATATTATGCAAACCTCAAAATATCCATTTATTGAAAAGGACAAACTGCCTAACAAGTGGCAAGTTTCTGACCTTCTGCTCCTGACAACCTTGATCTCTGAGCAAATTCTAAGAAACAGCTTTGAAAAACAGCTCCTTTCCTCAGTTACACTGGAGGGCTTCACTTCCTGC-AAGCTTTACTCAGAAGTATAATA-AACAGAGGAGCCTGGAACACAGACATGTGTCTCTTTCTTCGGGTTGAACTTCTGGGACCCCTGCCTGGACCCAGGACAACAACAGCAGA ....:xx..:..x..:x.:.:x........xx-.....x--.:..:....................:...........:.....:..:.x:..:..::::..:x.:.........x...-.:......x.:xxx:::...:xxxx::x...-----.:.x.:...x.:.:x.------.x..:.x:.:::.-x......:..x..x:x:..x.....x--------------------....x.:......:....-----..x.:..::....-------.....:------------------------x.:.x..:...--......--------...:x.x...---------------------------------....:.....x.:......x-..:x.x:.:.:.:..........-...x......:..x.---------...x.:..x..::..:.::.:xx.......:.::..xxx:......:x.:............... 32M1D6M2D78M1I31M5I16M6I13M1I26M20I18M5I13M7I6M24I11M2I6M8I10M33I20M1D23M1D15M9I65M 269/389 69.2% 510/94230402 0.0% 126/389 32.4% 27933616 NA +12550 chr4 + 190214555 55087473 55087472 55087761 289 TAACCTCAGGGCTAAGGTTATGTGGAAGTGGGATGCAACAGCCTTAGACAAGGTCTTCCTTCCACTTCCAATCCCCCTCCCGAGATGGCCTTGAAGTCACCC---TCCCCCGGGGGATGTTAGGCCATATACAGTACCTGATTCCTGCTGTGTTGTCATAATGGAATTTGGGGTCACATACTTCCTCCTCCTCCATACAGGAAACAGGTGAGGTAGGCAGAGAGAGTCCAGAATCCTCTTCCATGCTCAAAGTCTCTGATATCGGAAGAACAATGTAGTCTTTGCCATCCTG chr4 - 94230402 27151225 27151224 27151504 67078899 67078898 67079178 280 TATCCCTATGGAGGAGGTTAAATA----TGGACCACAGCAGCTGAAGTC----TCTTCCTTTCATTTTC---CCTTCCCCCAGCATGAACAAAAACTGCCCCAAGGCCCCAGTAGGATGTC-GACCATATAAAATACCTAATTCCTGCTGTGTTGTCATAATGGAATTTAGGATCACAGACTTCCTCTTCCTCCTTACAGGAAGCAGGTGAAGTTGGGAGAGAGAGGCCCGAATCCTCTTCCATATTCAGCGATACTGACAAAGGAAGGACAACGTAGTCTTTACCATCCTG ..x..::.x..xx:......x:.:----...:x::..:....:xx..x.----........:..:..:.---..::.:...::x...:x.xx:..x.xx...---x....x.x:......:-.:.......x.:.....:.............................:..:.....x........:......x........:.......:..x..x........x..x..............::...:x.x:x....:.xx.....:....:.........:........ 24M4D21M4D16M3D30M3I16M1D170M 208/277 75.1% 280/94230402 0.0% 15/277 5.4% 27936248 NA +6328 chr4 + 190214555 55088866 55088865 55089003 138 ACCTGCTGAGCATTAGCTTGCAAGAGATTTCCCAAATGTTCCACCAACTCTGAAAACGTGGGTCTCTGACTGGGCTCCCCGTGCCAGCAGTCCAGCATGGTCTGGTACCTAGAGAAGCAAAACACTGATTTCATTAAA chr4 - 94230402 82109423 82109422 82109555 12120848 12120847 12120980 133 ACCTGCTGTACATTGGCCTGAAGAAGGTCTCCTAAGCGCTCTACAAGCTCAGTGAAGGTGGGCCTCTCTGTGGGCACTCCATGCCAGCAGTCCAGCATTGTCTGGTATCTAGATAA--AAACCACAGGT---ATTAAA ........x:....:..:..x.::..:.:...:..::.:..:..x.:...x.x:..x.....:....xxx.....x.:..:.................x........:.....x..--...x...x.:.---...... 116M2D11M3D6M 100/133 75.2% 133/94230402 0.0% 5/133 3.8% -27020557 -67209845 +7176 chr4 + 190214555 55088866 55088865 55088985 120 ACCTGCTGAGCATTAGCTTGCAAGAGATTTCCCAAATGTTCCACCAACTCTGAAAACGTGGGTCTCTGACTGGGCTCCCCGTGCCAGCAGTCCAGCATGGTCTGGTACCTAGAGAAGCAA chr4 - 94230402 27152431 27152430 27152550 67077853 67077852 67077972 120 ACCTGACGGACGTTGGCTTGCAGTAAATTCCCCAGGTGCTCCACCAGCTCTGAAAAAGTTGGTCTCTGCTTAGGATCTCCATGCCAGCAATCCAACATAGTTTGGTACCTAGAAGGACAA .....x:.::.:..:.......:x.:...:....::..:.......:.........x..x........x:.:..x..:..:........:....:...:..:...........::::... 120M 90/120 75.0% 120/94230402 0.0% 0/120 0.0% 27936435 NA +21992 chr4 + 190214555 55089369 55089368 55090304 936 CTTACATTTCTGGTGTAGTATAATCAGGGGCCCTCATTCTAGTTCCTTCTTTCAATCGCCTACAAAATTCTTCATCAATCTTTACCCCAGGATATGGAGAAGCACCTAGAATAAAACAGGGAGGAGAC-------------------ATTCTTTGATTTGATTTTCTCTTATAGAAAACCCTG-AGCCTGAATC------------TTGCACAT-------------------------------------------------------------CCTCATCAC-------------------------------CTATGTATCTATTTTTT--TTTTCAAAGCTTCCGAGAAGTTTTGCCTGA---------TAGACATGAAGTACAGGAGAGGAAAAGACAACT-------------------TTTGTCT---------------TCCTCTTTGGAGTCT--GGATGGAAGGACAAAAAGAAATGACTTACCTAAGGAAAATATTTCCCACAGCAAAACACCAAAAGACCAGACGTCACTCTGGATTGTGTACACTCTGTCAAAAATTGTTTCTGGGGCCATCCATTTCAAAGGGAGGCGAGCCTACAGGGGTAGAAGACAAGGATTCAGAACCCAAATTAGCAAATATCTGA----AGAAAAAAACTTCCTCTGTTCCTGAACACAGGTCCTGAAGCTCTCTACGAGGAGTTTTAATTCTGTTACTTAAC-------------CAAGCACTGGGTTCATATTTGAAACTTACATCTCCTTTTCTGACATAATCTGGATCTTTATAAATATCCCGGGCCAAGCCAAAGTCACAGATTTTAACCACGTTCTTCTCCGATAAGAGGATATTTCGTGCCGCCAGGTCCCTGTGGATACACTGCAAAGAGAA----------TCATGTG-TGCATTAGGTCTCGGCAC---------AGCTGATCTCTTTCACATCTGTTGTGACCTCATGCATCAAAAA-------------AAAATCCCACATCAGAAAGCCAACT---GATTAACAAGGACTGGGTT--AGTATCTTTT-----ATCAACACT--------TCAGGAAAAAAGTCTGTGAGCTTT---GCTGAGACACACATCTGCTTATTCCATAAACAGCCCCAGCCTTTGGAGTTAAATAATTA chr4 - 94230402 27152648 27152647 27153783 67076620 67076619 67077755 1136 CTTACATTTCTGGTGTTGTATAGTCTGGTGCTCTCATTCTTGTGCCTTCCTTCAGTCTTCTGCAAAATTCCTCATCAATTTTCACTCCAGGGTATGGTGATGCACCTAAAATGAGAGCAACGGTAATTTTAATGCATTGTATTCTTAATTTCTAGAATTAATTTTCTAACATATAATTCACTGTGGCCTGAGTTAATAAGGTAGTTCAGTACATTTGGATGTGCAAACAAATTATATTTACAATGGCAGAAGCAAGTGAATGAGTAAATGAGGCACATAATCACATACTGAAATCGCAAGACGATGCATTTAAGTCCATGTTCCTACATTTGCATTTTAAGGAAATTTGAGTATTTCAGTTTGACGGAGAAAATAAACAGGAAGTCTTCAAGAAGTAAAAAATACTGAAGAGAATCCAGGAACATTTTGACTATTTTGTTCAACAGATTGTTGTTTAAGTTTTAAGATGGTCAGTGAAATCAAAGTGACTCACCTAATGAAAATATTTCCCACAGCAGAACTCCAAATGACCACACATCACTCTGAATGGTATATACTCTATCAAAAATGGTTTCTGGTGCCATCCATTTTAGCGGTAGCCTAGCCT---------GAAAACatttaatttaaatatatatatatataCATCACAGCTCAGTAAAAGACTGATTTT----CCAAACACCCATTT--------------AAGGGTTTGAGTTCTG--ACTTCACATTAACTCTCTTTCAAATAGAGAGTC------TGAAACTTACATCTCCTTTCCTGACGTAATCTGGGTCTTTGTAGATGTCTCGAGCCAAGCCAAAATCACAGATTTTGACCACGTTATTGTCTGACAAGAGGATATTACGAGCAGCCAGGTCCCTGTGGATGCACTGCAAAGAGAAGTAAACAACTTCAAGCGCTGCCTGTTGTCACAGCTCTGTCCATGGGGCTGATCTCTTTCACATATGTGCTCTCCTCC--CCTCAAAGGGCAGATAATTCTTAAAACCTCTCAAGAAAAAGAAACCTCAGCATTAACAGTTACTGATTTTAAGTGCTTTTTTGATGGTCACAACTGATTTGGCTCAGGAA-----TACTTGTGTTTCCAAGTCCAAACATACATCTGTTTATCCACTACGCAAAGAGGTCCTTTGAAGTTATCTAATTA ................x.....:..x..x..:........x..x.....:....:..x:..:........:........:..:..:.....:.....x..x.......:...:.:.xx::x:.x.:x:-------------------...::.x..x..:.......xx:...x..xx.x...-:......:.:------------:x.:....-------------------------------------------------------------.x.x.....-------------------------------.:....x:...:x...x--....x.:::xx.::...x.x..:x.::...---------..:...x.....x:xx:...:.x...:.xx...-------------------....x..---------------.:x.:x..x:...:.--:.....xx:.xx...xx:..:.....:......x...................:...x.....x.....x..:........:..x..:..:.....:........x........x...........:.:x..x..x.x.....---------...:...xxx.x.:x:..:x:.x..xx::.x.:...xx.----..x....:...xx:.:.----.::.....xx:.::--------------.:.:....x.:.....--....x..-------------...::.xx.:..:------...................:.....:........:.....:..:..:..:..:...........:...........:........x..x..:..:...........x..x..x.................:..............----------...x.:.-...x.xxx...x.:..x.---------:.................x...xx.xx....x--.x.....::-------------....:.:.x..xx.:....xx.x..---x.......:xx....:x..--...:::....-----:...xx...--------.......-----.x:x..x.:..:---.::x.:...:.......:....:.xx..x:..:xxxx:x......:.....xx...... 128M19I36M1I10M12I8M61I9M31I17M2I30M9I33M19I7M15I15M2I143M9D39M4I17M4D14M14D16M2D7M13I13M6D145M10I7M1I18M9I32M2D9M13I25M3I19M2I10M5I9M8I7M5D12M3I59M 643/894 71.9% 1136/94230402 0.0% 284/894 31.8% 27936721 NA +14719 chr4 + 190214555 55089665 55089664 55090089 425 TGGAAGGACAAAAAGAAATGACTTACCTAAGGAAAATATTTCCCACAGCAAAACACCAAAAGACCAGACGTCACTCTGGATTGTGTACACTCTGTCAAAAATTGTTTCTGGGGCCATCCATTTCAAAGGGAGGCGAGCCTACAGGGGTAGAAGACAAGGATTCAGAACCCAAATTAGCAAATATCTGAAGAAAAAAACTTCCTCTGTTCCT----GAACACAGGTCCTGAAGCTCTCTACGAGGAGTTTTAATTCTGTTACTTAACCAAGCACTGGGTTCATATTTGAAACTTACATCTCCTTTTCTGACATAATCTGGATCTTTATAAATATCCCGGGCCAAGCCAAAGTCACAGATTTTAACCACGTTCTTCTCCGATAAGAGGATATTTCGTGCCGCCAGGTCCCTGTGGATACACTGCAAAGAGA chr4 - 94230402 82114922 82114921 82115301 12115102 12115101 12115481 380 TAGGAGAAAAAAAACCACGTTCTTACCTAGAGAAAATATTTCCCATAGCAGAACTCCAAAAGACCAGACATCACTCTGTGTTGTGTAGATCTTATCAAAAATTGCTTCTGGAGCCATCCATTTGAGTGGAAGTCTTGCCTAAGAACGCAGAAGACATAA----------CACATTGCCAG--AACTGTTGTTAACAATCTGCTCAAGTCCTAGAAGAATAAAGG-CCTGAGATT--------AGCATTTTAGGTTTTTTCC----------------------------ACTTACATCTCCTTTCCGTACATAGTCGGGGTCTTTGTAAATGTCCCTGGCTAGCCCAAAGTCACAGATCTTCACCACGTTGTTCTCAGAAAGAAGGATGTTCCTTGCTGCCAAATCCCGATGGATGCACTGTGAGGGAA .:.:..:.x.....xx.xxxx........::..............:....:...x..............:........x:.......x.:::.:..........:......:...........x.:x..:..x.xx.....x:::x.:........x::----------..x...:x..:--.x...xx.xx..x..::.x...x:x....----...:.x...-.....:::.--------:.x:.....:x.:.x..x.----------------------------...............:.xx.....:..x..:.....:.....:....x...:.:x..............:..x........x.....x..x.::.....:..:.x...:....::....x:.....:.....::.:.::. 159M10D11M2D29M4I9M1D9M8D19M28D140M 273/376 72.6% 380/94230402 0.0% 53/376 14.1% -27025257 -67205145 +6470 chr4 + 190214555 55092591 55092590 55092713 123 GCTGATTTCCCCTCAACCTTTCTTACCTTTCGCGATGCCAAGAACTCCATGCCCTTAGCCACTTGGAAGCTGTAACAGATGAGATGCTCCAAGGTCAGGAAGTCCTTATACAGATCTTCAGGA chr4 - 94230402 27154818 27154817 27154940 67075463 67075462 67075585 123 GCCATTCTTCCCGAGAAGTTCCTTACTTTGCGTGAAGCCAAGAACTCCATTCCTCTGGCCACCTGGAAGCTATAACAGATGAGGTCCTCCATGGTCAAAGGGTTCTTGCAAAGGTCTTCAGAA ..::x.:.:...xx:.xx..:.....:..x..:..x..............x..::.:.....:........:...........:.x.....x.....::::..:...::.x..:.......:. 123M 89/123 72.4% 123/94230402 0.0% 0/123 0.0% 27937773 NA +5729 chr4 + 190214555 55092612 55092611 55092716 105 CTTACCTTTCGCGATGCCAAGAACTCCATGCCCTTAGCCACTTGGAAGCTGTAACAGATGAGATGCTCCAAGGTCAGGAAGTCCTTATACAGATCTTCAGGAGCT chr4 - 94230402 82116159 82116158 82116263 12114140 12114139 12114244 105 CTCACTTTTCTGGAGGCTAGAAATTCCATCCCTTTTGCCACTTGGAAGCTGTAACAAATCAGATCCTCCAAAGTCAGTGGCCGCTTGTACAGATCTTCAGCATCT ..:..:....xx..x..:.::..:.....x..:..x....................:..x....x......:.....x::x:x...:.............x.x.. 105M 80/105 76.2% 105/94230402 0.0% 0/105 0.0% -27023547 -67206855 +8789 chr4 + 190214555 55094728 55094727 55094974 247 TCCTTGTAACACCCTATCACCCTGTCTGCTCTGACAAGAGC-ATGCCATAGCATGCAGGAAGCACTAGCCAGTACCTTCCTCTTCTTCTACATCACTGAGGGACTTCTCCTCCACAAATCCAGAGCTGGCTGAGCTCTGGCTACTGGTGATGCTGTCCAAGCGCCGTTTCAGATCCACAGGGATTGCTCCAACGTAGTCTTTC---CCTTGACGGAATCGTGCCCCTTTGGTCTATAAAAAAGCAAAGGAA chr4 - 94230402 27156334 27156333 27156576 67073827 67073826 67074069 243 TCCCTGATGCCCCTCATCATCCTCTA----CCAATGAGAGCTGTTCCAAAACCAGGAGAAGACA-TATCC--TACCGTCCTCCTCTTCCACGTCGCTCAGGGACCGCTCTTCCACAAAGCCGGAGCTTGTGGAGCTCTGGCTGCTCGTGATGCTGTCCAATCTTTGCTTCAGGTCTGTGGAGATGTCCCCAATGTAGTTTTCCTTACCTTGCCGAAACCTGGCACTTTTAGTCTAGAAAGGA-CAGAGAAA ...:..xx:.x..::....:...x.x----.::.::.....-:.x...x.:.xx.x..:.::..-..x..--....x.....:.....:..:..:..x......:x...:........x..:.....x.:x...........:..x..............x.x::.:.....:..::::.:...xx.:....:.....:..:.---.....x..:..:.xx..x.:...:.....x...::.-..:..:.. 26M4D11M1I22M1D5M2D131M3I36M1D8M 168/239 70.3% 243/94230402 0.0% 12/239 5.0% 27938394 NA +3530 chr4 + 190214555 55094802 55094801 55094895 94 CTTCCTCTTCTTCTACATCACTGAGGGACTTCTCCTCCACAAATCCAGAGCTGGCTGAGCTCTGGCTACTGGTGATGCTGTCCAAGCGCCGTTT chr4 - 94230402 82116846 82116845 82116939 12113464 12113463 12113557 94 CTTCATCCTCTTCGGAGTCACTGTAACTCTTATCTTCAATAAATCCTGAGCTGGCAGAGCTCCCAGTGCTGGCTACACTCTCAAGGCGTCTCTT ....x..:.....x:x:......x::xx...x..:..x.:......x........x......:x:x.:....:x.::..x..x.:...:.x:.. 94M 62/94 66.0% 94/94230402 0.0% 0/94 0.0% -27022044 -67208358 +3953 chr4 + 190214555 55095574 55095573 55095800 227 TACCTTGTAGGGGACAAATTCATTTCTCTTGCTCCTCAGGTAAGTGGACAGGTTTCCAAATTTGCAGAATTCCACAATCACCATGAGTGGCCCT--GCAGGCAGCATGTCCAGGAAGGAAAATGGGTTTTCACTCATATTCCTCACTAAGCGTTTAATATAGTGATGAACCCAAAAACACC-TTAGAAGAAGGC---TACAACCTTTC------ATTGGGACAGGAGTGTAGAAATCAG chr4 - 94230402 82117983 82117982 82118208 12112195 12112194 12112420 226 TACCTTGTATGCAATGAAATCTCCTCGTTTTCCTCGTAGATAATTGGACAGATTTCCATATTTGCAATATTCTACTATGACCATTAAAGGACCTAAAAAGACAGT-------GAAAGTCAATTGAGTTCTGAAGCA------CTGCAAAGCACTTAATGTTACCTTATCCTCACAAATCCTATTCAAAATAGGCAAATACTATCATTCTTGGTAAATAGGTGAGGAATTTAGGAAACAG .........x.x:.::..x..x::..x:..x.::.x:..:...x.......:......x.......:x....:..x..x.....x.:x..x...--:x..:...:-------.:...xx..x..:...:.x.xx..------:::.x....::.....:.x::xx.:xx.:..x...:x.:-..x:..:x....---...x.:.x...------.x.:..xx....:.x...:..x... 94M2I9M7D24M6D39M1I12M3I11M6I25M 137/214 64.0% 226/94230402 0.0% 25/214 11.7% -27022409 -67207993 +6794 chr4 + 190214555 55095575 55095574 55095817 243 ACCTTGTAGGGGACAAATTCATTTCTCTTGCTCCTCAGGTAAGTGGACAGGTTTCCAAATTTGCAGAATTCCACAATCACCATGAGTGGCCCTGCAGGCAGCATGTCCAGGAAGGAAAATGGGTTTTCACTCATATTCCTCACTAAGCGTTTAATATAGTGATGAACCCAAAAACACCTTAGAAGAAGGCTACAACCTTTCATTGGGACAGGAGTGTAGAAATCAGCTGGTCCCAATCCCCTT chr4 - 94230402 27158131 27158130 27158339 67072064 67072063 67072272 209 ACCTTGTATGGGACAAATTCACTCCTTTTGCTCCGTAGGTATGCTGAGAGATTTCCAAACTTGCAGTATTCTACAATCACCATGAGTGGGCCTGC--GTAACATACAAAGCAA-------------TTACTTAG-------AATGATCGTTT-atagaatcatagaatcacaga-atcatagaatgg----------tttgggtgggaagggacctttaagatcatctagttccaacccccct ........x............:.:..:.......x:.....x.:x..x..:........:......x....:.................x.....--.:.:...::xx..x..-------------.:...:.x-------.x.:.x.....-...x.:.x..::.x:..x.:.-.:.x.....x::----------...x:x.....x:...x:x.x:.:....x..:..:....:....:. 95M2D16M13D8M7D11M1D21M1D12M10D46M 151/209 72.2% 209/94230402 0.0% 34/209 16.3% 27937444 NA +9203 chr4 + 190214555 55096211 55096210 55096391 181 CCACCCAC-----AGTTACTCACCTCCTGGCTTGGTACAGGCACCTAGAAGGTTGACCACATTGAGATGGTGACCAATATGAATGAGGATCTTGAGTTCAGACATGAGAGCTCGATGCTCACTGTGTGTTGCTCCTTCTACA-----AATACAGTACAAAG-AGGGAAATCATAGGTATGGACATTTCCTTC chr4 - 94230402 27159546 27159545 27159737 67070666 67070665 67070857 192 CCACTCACTGAGAAGTTACTCACCTCCTGGCTTTGTGCAGGCTCCAAGTAAATTGACAACGTTGAGATGATGACCAATGTGAATGAGGATCTTCAGCTCGGACATAAGTGCTCTGTGCTCACTGTGAGTTGCACCCTCTGCAGAAGTAAAACAATACAAGTCAGGAGCATCACAGACAGAAAGGTTCTCCTC ....:...-----....................x..:.....x..x..x.::.....x..:........:........:..............x..:..:.....:..x....x:...........x.....x..:...:..-----..x...:.....:x-...::x....:..::.x::.x:..::.:.. 8M5I129M5I14M1I30M 140/181 77.3% 192/94230402 0.0% 11/181 6.1% 27936665 NA +6412 chr4 + 190214555 55096224 55096223 55096372 149 CTCACCTCCTGGCTTGGTACAGGCACCTAGAAGGTTGACCACATTGAGATGGTGACCAATATGAATGAGGATCTTGAGTTCAGACATGAGAGCTCGATGCTCACTGTGTGTTGCTCCTTCTACAAATACAGTACAAAGAGGGAAATCAT chr4 - 94230402 82120304 82120303 82120450 12109953 12109952 12110099 147 CTTACCTCCAGCTTTGGTGCAGGCTCCCAGCAGGTTGACTACATTCAGATGGTGTCCTATGTGGATGAGGATCTTCAGTTCAGACATTAAAGCCTTGCATTCATTAGTAGTTGCACATTCTGC--TTAAGATAAACAGGAAAAAACCAT ..:......x.x:.....:.....x..:..x........:.....x........x..x..:..:...........x...........x.:...::x::::...:.:xxx.....x.x....:.--x..x::..x.x..::::...:... 123M2D24M 104/147 70.7% 147/94230402 0.0% 2/147 1.4% -27024080 -67206322 +24628 chr4 + 190214555 55097656 55097655 55098860 1205 TTTTACCTTTCAACATTTTGACTGCTACTGTCCTGCAAGTTGCTGTCTTGTCAATTCCAAAGGCATCTGCTTCAATCACTTGGCCAAAGGCACCACGGCCAAGAGGCTTACCTAGAGTCAACAACAACAGCAACAAGAAAACAGACTTGGATTACTATACAACCAAAGTGATACGCAGAGACATCAACTAGATAGGGTGACCATACATCCCAATTTAACATGGATAGTCCAGTTTACTCCTTTGTCCTGGCTTAATTATTTAATAACTCCCCCTTCACTCTCCAAATGTCCTGCTTTGGATGATTACATAGGGACCCTACCTCTAAGTGGCTATATGAATGATTATACAAATTCAAGAAATGGAATTAATATTTCTAAACCAGAATCCA-ACATCTGAATA----CACCACATTTGTCATCATTCTAATG--------GAGGAAGAGATGGCCTGGTAAACACAATATCAAATTAATAGCA-----ATTGAAAATGCACCTAGCTTCAGCCGGTCTCTGGGGAATTCCCATTTGCTGGCATCATAAGGCAGTCGTTCACAATGTTCATCCAATGGGAGTTCATCTGGATCCATGACGATGGACAAGTAGCCTGTCTTCAGTTCCCCTCCATTGGCCTGGAAAGCATCAATCCTTCCAGTCATAAACACACTGTTGTTTGGCTGTTGTTTTGT---GTGCTTGTT----------------ATTGCTGTTTATTGGAGCCTCATTCCTGTCTCATTTTCCAATAAAACTCATGGAGT--TTGAGAGTGGTCCTATTATAACCCTGCTTCTAGTTTCCCTTGTCCCCCAAAGGAGCTCAGAATTAAGGTTTTAAAGCTTAATTACAC-TAGACAGTCCAAGCCCTTTTCCTCTC-TAGTGGCTTCTATCAATTAAA-------------TCCCTGAGATCCAGCCAAAAGAAAGTGGGCAGGAACGTTATTGTATTGAAAT--AAAAATGTGCCCATTGAGCCAATAACAATGGGAAGAAACAACTC-AAAGAACCCCAGTCAGTTTTCATTAATCATG-AAAACCAATGTGCAT-GGGCAGAAGGGAAATTATTTTTTTACCCGCTTAACGGTCCGTAGGATGATGACAAGAAGTAGCCAGAAGAACATGGCAATCACCGCCGTGCCTACTAGAATAATGATTTCCAAGTTCGTCTTTTCCTGGGCACCTGGAAAGACACAATTGAATGAGT-ATCAACAGTTGGAAACTTATACTTTTTGTTTGT chr4 - 94230402 27160454 27160453 27161531 67068872 67068871 67069949 1078 TTTTACCTTTAAGCATTTTGACTGCCACAGTTCTGCAGGTAGCAGTTTTGTCAATCCCAAAGGCATCAGCTTCTATGACTTGGCCAAAAGCTCCACGCCCAAGAGGTTTACCTTGAAGTGAGAAGAACAG----------ACCGATT----------------------------------CATTTGCCTGGTACAGTGGTCAAAAGACACAGAATAA-----ACAGCAAACTGAATTTCTATATGATAAATTAA---------------------------CAGATGACAGACAGTGGG------------------------GAGAGGCTGTATTATATCCTATGGGACTTTGG-----------AGCGCTCCCAG----GAGGCTGTGCATCAGGGCAGTCCCACCAC--------CCGCTCTGAAGCCCCTCCTGGTGCAGGGCTGGCT--------GCAGGGTCACAT-AATGGCCTGTGCAGGGAAGACACACCTAGCTTCAGTCGGTCTCTGGGAAACTCCCACTTGCTGGCATCATACGGAAGCCGCTCGCAGTGCTCATCTATGGGGACTTCATCAGGATCCATGATGATTGACAAGTACCCAGTCTTCATGTCACCTCCATTGGCCTGGAAAATGGCATT------AGTTGTAAATGTATAAGTTTTTTGGTGGAGATGTGCAAAGTGCCAGTTTCTCACTCTGAAGTACTCTGCTGTTTCCCAGAA----GTGCCTGGCTACCATTCCTCTA-----CACGATGTCACTGGGAGTGCCATCATCGTTA-ATTACTTGCACttttttt---------------------attattattt---attttaaaCAAACAAAAACAGCTGAAGAACTTTTTCTCTCACAAAGGCCTGT-TCAATTAAAAACAAATTTCTGTGCCCTCAGTTCCA--------------GGCAAGAATGTTACAGCACGGAGAGAAAAAAATGTGTCTGTTGATTTAAGAACAATGGAAAGAAACAACACAAAAGGATTCAAGTCAGCTTTCATTTGTCATGCAAGACCAGTGCTGATAGGACAGTACAAGAATTTTTTCATTACCCGCTTAACGGTCCGAAGGATGATTACAAGAAGCAACCAGAAAAACATGGCAATCACTGCAGTGCCAACAAGGATAATGAGCTCCAGATTTGTTTTCTCTTCGGCGCCTGGGAAGAAATAAATGAATATCTGAGCGATAGCTGGAAGCGTATTGGTTTTGTTCAT ..........x.:............:..x..:.....:..x..x..:........:...........x.....x..x...........:..x.....x........:......x..:x::.x..x.....----------..x..:.----------------------------------...:x:.:x.:..x:...::..x.x:x.x..:xx...-----.:..:xx.x.xx.:.:..x.:.xx.::x....---------------------------..:...x.xx:.xx...:------------------------:..x....:...x.xxxx:...:x:.x..:::-----------.::::.:.:.:----..:x.::-:....x.:::.----......--------:.::...:.x.--------.:x.x..:.x....:--------:..:x:...x..-...:..x-----.xx...:.::.............:...........:..:.....:..............x..x..:..:..:..:..:.....:.xx....x......x..........:...x........x..x.......xx..x..................:::x..x.------...::....:::.:x:x.x...x.x..xx.x.x..:---....:x...----------------x:........x:::..:----:.x....x..xx:x....xx..-----..:.:x..--:..:.....x:x::..::.x.-x:.:...x:.x...:::.---------------------....xx:...---.x:....x:.x..-x.:....::x...xx.....:.....-:.:x...:.x.-.........-------------x....x..x....--------------....:...:....:x.:.:x..:.x--.........:.::....x::..x........:..........x.-....:.::.x......:.......x:.....-..:....:..:xx..-..:...x.x:::....x...:x...................x........x........:.:......:..............:..x.....x..x..:.......x:....::..:..:..:..:.x...:.....:....x.:..x.....:xx.-.x.:.:..:.....:.x...xxx.......::. 130M10D7M34D37M5D32M27D18M24D32M11D11M4D7M1I11M4I6M8D11M8I15M8D12M1D7M5I164M6D36M3I9M16I17M4D22M5D8M2I21M1D18M21D10M3D13M1I26M1I11M1D9M13I13M14D25M2I44M1I31M1I15M1I157M1I33M 709/1018 69.6% 1078/94230402 0.0% 247/1018 24.3% 27937202 NA +6470 chr4 + 190214555 55098134 55098133 55098279 146 CACCTAGCTTCAGCCGGTCTCTGGGGAATTCCCATTTGCTGGCATCATAAGGCAGTCGTTCACAATGTTCATCCAATGGGAGTTCATCTGGATCCATGACGATGGACAAGTAGCCTGTCTTCAGTTCCCCTCCATTGGCCTGGAAA chr4 - 94230402 82124199 82124198 82124344 12106059 12106058 12106204 146 CACCCAGCCGCAGTCTGTCTCTTGGGAACTCCCATTTACTGCTGTCATAGGGAAGACGGTCACACTGCTCATCAAGAGGCATTTCCTCTGGATCCATTATAATTGACAGGTACCCTGTTTTAATATCTGTGGCATCAGGCTAAAAA ....:...:x...:.x......x.....:........:...x::.....:..x..x..x.....x..:.....x.:x..x.x...x...........x.::..x....:...x.....:..x.xx..:x:xx...::.x..::... 146M 103/146 70.5% 146/94230402 0.0% 0/146 0.0% -27026065 -67204337 +11245 chr4 + 190214555 55101891 55101890 55102510 620 ACTGACCTTCTATTATGAAAAATGCCTCCACTTTTGCACAGCCAAGAACACTGCATGCCTGGCAGGTGTAGAGGCCTTCGTCCTCCTTCCTCACTCTGCGGATAGTGAGGTTCCGGTTCCCATCCTTCAATACAATGCCTAACAGAGGAAGAAAACGATCATTCTCATTTATGATGATGTAGTCTGTGAAGTTTTTCAGGGAAATTTAGAAAATATAAATGCTGCCCTTCATCTTGTTCTATTATCTAACTCTGTAGAGTCACATGGGATCTACTGCTGACTAATCTCCTATATGGCTTTCATGAAAATTCAACAGGGCCCCATACTCCAATTCTAAGTCTGTGAAATGAGCCAGGTCATGGACACCAATACTGCTTTTTTTCTACATTACATCAAGAAATAATATGGCTTTTTAGATAACATCCCTGGGAAAGTTCTGCAACCCAAGAGTGATAGCCAAATTCTATTTACCTGAGTCTTCTACAAGGGTCTCATTATCTTTAAACCACATGATCTGTGGAGGGGGATTCCCAGATGCCGTGCATGAGACTTCGATGCTTTCCCCAATACTTGTCGTCTGATTCTCCAGGTTTCCTGTGATCGTGGGTGCCACACGCTCT chr4 - 94230402 27162650 27162649 27163092 67067311 67067310 67067753 443 ACTGACCTTCCACTGAAAAATAAGCCTCTGCTTTTTTGCATCCAAGAATATTGCAGGCAAGGCAAGTGTACAGCCCTCCATCTTCTTTCCTCACTCTACGTATAGTTAGTGTTTTGTTTCCATCTTTCAAAACGATACCTA---GGAAAAAAAAGTCATTATACTTAGTT---------------GGGTAGTTTTT----------------------------------ATGTTGGTTTGTGAT--AACAATGCAAA-----ATGAAACCT-----TGAG--------------------ATTAAAATTAAA------------------------------------AGTTAGCCCTAGGAAACGAAG---------------------------------------TCCTTAAGCGACA--------GAAAATCTGTAACAAAAGAG--------AAATTCC--TCACCTGAATCTTCAAAAAGTGTTTCACCATTTTTAAACCACGTGATGTTTGGAGGAGGAATGCCATTTACTGTGCATGACACTTCTATGGTTTCACCAATGTTTGTTGTTTGATTTTCCAGATTTCCCACAAGTGTGGGTGCCATGGGCTCT ..........:.:.:x:...x.x.....::.....x::..x.......:.:....x..xx....:.....x..x...:.:..:..:...........:..x.....x..xx.::x...:.....:.....x..:..:....---.:::..:...::x..:..x..:.x..---------------.x.x.......----------------------------------..x...x.:.:.x..--...xx..:.:.-----...::.:..-----...x--------------------..x......x..------------------------------------..::..x:.xx...x..x..x---------------------------------------.::...::::...--------:..:x....:...xx.....--------......:--.:......:.....x.x...x..:...::..:..........:....x.x......:...x.x...xx.:.:........x.....x...x....x.....::....:..:.....:.....:.....::::.x:..........::x..... 141M3D26M15D11M34D15M2D11M5D9M5D4M20D12M36D21M39D13M8D20M8D7M2D153M 317/443 71.6% 443/94230402 0.0% 177/443 40.0% 27939241 NA +21222 chr4 + 190214555 55104636 55104635 55107905 3270 TCCCTACCTAGGACTGTGAGCTGCCTGACCACGCAATGTCTTTTCTTGGTCTTCCTGTCTTGAGCAAGGCAGACATAGTCTCCTTGGTCCTGCAAGGATGCATTCT------TAAGCTCCATGATCAAAATGTCATTTGTGCTATTAGAGAACATGGTGGCATTCAATTTCCAAAGAGTATCCAAGTTCTTGCAAACAGGTGTGGGCAACTCTCCCACATGGATTGGCAGAGGCTGTGGGCCAAGCTTGTACCATGTGAGGTTCTCAAACGTAGATCTGTCTGCAGTGCACCACAAAGACACGCTCTCCTGCTCAGTGGGCTGCATGTCAGGTTGCAAAGTAATTTCAGGACCCCCT-----------AAAATGAAGAGGCCATAGTTATTGAATGGTGATTTAACTTGGTACAGCTCACTATCATCTTGCTGCTTTCAGACTACTACAAAGTACCAAAAGAAATGAAGCTCTATCCGTTCCAGGTGATGTACTACAACTTGACAAACAAACTAGACAATTCAGGTCCCAAAATATCTTATTTGGCCAAACACATTACTTGAAAATGTAAACGAATTCCTCAGATATTTACCACATCTCCACTATGAGCTCTACGCAATGTTTA-ATATATTAAAAA--------TCCAA--AGCAAAATCTCTAATTCTAACAGAATTTTAAAATTAGGTCTTCATTAACACTAACACTCAATGATATGAAAGCTACATTTATGCCAATGAATTAGCCCTGGCTATAATATTCCAT-TCAGCACAATCAGCTAAAGCTTATCCATAAAACTAAGATGCACAGGCAAAA------------TCGGC---AGCATTGGGAGGGCACTGCTCCTATGTCCTTCTGATTGCCTCCATAAAGCCCACCCTCATCAACTGTTCCACAGCAAGCCCACCAATATGTACTGAAGCTCAATAAGCCAGGCACTGTGCCAGACTCTGAAGACTGAGATGTAAATACCACACAGAGCTTGTGGTTTAAAGCATCTGTGAAACCATTCTCTCTCCAGTGTAGTTAGACG---CACTGACTTCACATAAGCCCAGGAGATACCTGAGAAGTTGTAATTTATGAATGAAAGCATCAATGATCAATCCAAGTCCTCTTTCCTAAATGCCATGCCACTCACATGAATGGCAAAAACAACAGGGAATTACATAGCTTAGTACCCACTGTGTGAGTGATCCAACCCAAACCTCCAGAGAAGAGTACTTACTGGTCACGTGGAAGGAGATCACCCTCTCTCCTCTCCCGACTTTGTTGACCGCTTCACATTTGTACAAAGCTGACACATTTGCCGCTTGGATAACAAGGGTACTTACAGTCTGTG--CGGGGAAAAAACAAATCCCAGGCCATAAACAACGCGGCTGTTTGTGCACAAGCACTCAGTCCAGCAGTCTCCACAATCACTC--CAACCTGC--------CTATGCCATTCCCACTTCTGCAGCGGTTGGACACGCTCAAATTTATGCAATTGCAGGTTGAGTATCCCTTACTCA---AAACGCTTGGGACCAAAAGTGGTTTGGATTTTGGATTTTTTTTTTTGGATTTTGGAATATTTGC-ATTGTATACTTACCAGTTGAGCATCCCTAATCTGAAAATC--CAAAATGCTCCAACGAGCGTTTCCTTTGAGCACCATGTCGGCACTCAAAAAG----GTTCAGAATCTGGAGCATTTTGGATTTGGGGTTTTTAGGTTTGGGATATTTACTCAATTTGTATAATTATGCTGCTGTGGAGCTCACACATTATATAAAAAGGGCTTTGGAAGCCATGAAACTAATGATGTGTTTTAATATGATATGATACACATTTTTTCATTCTCATGTTTATAAAATCAGAATCACCCTACACAGATGCATAGATTTAATGTCA--TAGATGTTTTTATTTTTCTCTGATAAGCTATTAATAAGTTAATGGTACTGCTAAAAGTCAATGGTATTTTCAAAGTGACTTAATACGCTCTATTTAATCATCCAGACTATTTGATTATTAATCTCCAATATGCCTCACATATTATTGTACCATCCTTCCATTAAAGAGAGAGAGATTTTCAAATTTTAAAACTTCAAACTCACTTTGTTTTTTCCTTCAATTAGAGCAAATTGATTTTTATTAACTTCAATTTTATTTCCTCCCTGGAAGTCCTCCA------CACTTCTCCATTCTTCACAAGGGTATGGGTTTGTCACTGAGACAGCTT------GGCTATAAGAAAGAGATAACAGCGCA---------------------TATTATGATTTAATTTTTCTTTAATTAGAGTCAAGAGTAAGGAAAAGATTCAGA-----CTTTGGTTAT------------------------TCTGTTCTTAGAAATAAC----TTCCAACGCAGCCTACCATGGTACAAGA-CTTGGCGCCAATTAAA--AATAGGCATTGACAATGAAGGAAAAGGT--------------TCTAGGTAGATTCATTCAGGATAC-AGGAGGGAAGCAGCTATTCTGGGAATAAACCTTCATTCATAAATTGGATCGACAAGACAATTCAAGTTAATTTAGTTCAAAGGAAGGCAAGGAAACTTAGAAGCCACTGGGCTCCTTAAAGTAATTTCTCTGGGACCATGGTCTCTGTGAAGGAAATGATCA-GCAGCTGAGGAAGAAGCTCATAGTGGCCATTTCAAAAACAACAACAGG-AAGTGGACTGCTTAGGGTGGTGGTGGGTTGGCTGCTGTTG--TTGTGTTTTTCCCTAAGGATGTCTGGACTTGTGTCAGAGCATGATAAGCTGGGCC-TGAGACCCTGAGGACTGGGGCTGGGTCTATCACTGCCTCTCATCTATCA--GCATTTCCTCTGAGAGATGGATCTTCACACACACAAGAAGGAGGGATGTGGTATTCACCAGCCGATTGGTATCGGGAGAAAAA----------CCAAAGACTGGCAATTAGCAAACTGAGCAAATAGCCTGTGTTTGGAGAAGTGTACCTCACGGCTAACCTAACAAGGCTGAG---------CTTAGCT--------AACCC--CAAAGG--AGGATACTCCAAGCAAAGACATCCCCTAAAATGTAAGACACAGAG----------------AAAGATGG-------------------------------ATGG------AGATTCAGGCTACCTCTTGAGAGAAA--ACTTTTTTTG----------------GTTTAGGCT--------------------TCTCC----ATTTAGGATGGAGTCATATCA-------------------------------------------------------------------------------TAGCTCAGCTGTAAGAAATGCAAG----------ATGGCAGGAAAGCAAAGAGCATGTGGCC---------TTACTCACCTGGGCTCGTTGGCGCACTCTTCCTCCAACTGCCAATACCAGTGGATGTGATGCGGG-GGAGGAATGGCATAGACCGTACATGTCAGCGTTTGAGTGGTGCCGTACTGGTAGGAATCCACAGGAGAGATTAGAGATTTCTCACCAATCTGGGGTGGGACTGAAGATGGGA chr4 - 94230402 27163991 27163990 27167175 67063228 67063227 67066412 3185 TCCATACCTTGAACAGTGAGGTGCTTCACCAGGCAGTGCTGTGTTTTAGCCTTCTTGTCCTGAGCAATGCAAACATAGTCGCCTCCATCCTGGAGGGAGATGTTACGGAGAATGAGTTCTAAGGTGACATTTTCACCGTTGGTATTTGAAA---CAGTTGCATTCAGCTTCTGAAGAGCATCAAGGTTCTTGCAAACAGGCATGGGCAGCCCTCCAAAGGGTGTCTGTGAGGCGTGAGCGCTGAGTTTGTACCACGATAGCTTCTCAAAGGTGAATTTATCAGCTGTGCACTGTAAGGACGTGTTATCCTTCTCTGTCAGTTGACTCCGAGGCTGGAGATTAATTTCAAGACCTCCTGCACGTTAAGAAAAATTACAAGGAAATAAAT-TCCCATGAGGTTGTA-------------------TATTTTGTTGCCAACATGAAATTGAAAGGCCTTTTTACAAATAAAGCATTATCCT-----------------CATCTCGTCTA----------------------------TTTTTAACTGAAGGAACAAATCACTGAAAAA--TCAATTAATCACTTAGGTAAAGGGCATAATCTCATTAAAAGCAAT-----ATATTTATATGGATTAAAGAAATGCTTCTCTAATTAATACAGTTTCTATTCCTACAGAAACTTCTGG--CAAGCAGTGATGATTCTTAGCAGT-----ATCTTACAGCTCTTTTTTTTGGTATGGATTTAA-------ATATTATTTCACGTGAGTA----TGGGAAATGATCTTCAAGAAGACAGAAGCTCTTTGGCACCAGTTTTGAACATTTTAGCCTTAGCTTTTATAGCACATCACTAC----TCCTTTTGTGAAACTACCCAAATTTCTCTCT----AGCTCTTCCAAAAGAC-------------TGCAAAAACCCAACAG--CAATCACTGT----------------CAGGATATTGGTGCC-CACTTAGTAT-TATTTTCATGGGACTG-----------CCACTCCAGTGATGCCAGCAGAACCAATGTCTTGGTTGAAGTTAGTTGGTGACTTTAAAAACTGC--TTTAGGA---AAACCTTCAGTAA--GATCAAAG------------GATTTTATAAAGCACATCTAAATAGTGAGAAATACA--AAATAACAT----------------------TAATTTAACATGACTCCTCAGAAAGATATACTTACTGGTCACATGAAAGGAGATAACTCTTTCACTTGATCCAGCTCTGTTAGTAGCCATACATCTGTACAAAGCAGATACATTTGCTGCTTGAATCACAAGGGTGCTCACAGTCTACAACAGAAGAAACAAGAAATTTCATACCAC-ATCAGTGCTAAGGTTCCTGCATGAG---TCTGACCA-------CCACAACAGCTCAGCAAAATGCTCTGCAAACTGAAACACTCTCCATAGCATAGTGGCTATACAGTCCCTTACTGATGCTCACGT-GCTTAAGTGCATGACAATCAGATAAAAGAAAACAACAAAAAGCAGGCTG----TGGTGTTCATGTCCATAAATACTG---TACCCACTACTCTCCGCTCTTCAGTT-----TTCCTAGCTTATTAACTGACAAAATTAACTCAC------------------CTAATTCAGACCCCTAAAAGAAAAGTACTGAAACATAAGCA------------------------------AGCTTCACAA--TGAACAATCACTTTGGGGAGGTGTCTACA--------------GACTTAAGTGTCCAT--CTCTACCTATTAGCTTCAGTAGGAT--------------------------CTTATATCACCAGA--------GAGCAGATCCCCCAGTTTTATGTTAGGTAAAAACGCTCATCTCTAG-TGATATACTTCTGATATGT-----GGACTGCTGAA---CAG------------------------------GTCTAGTCATTC------------------------------------------------------CCAATCAACAGAAAAGAAAATCC-----------------GCTCACCTTTGTTTTCCCAGCAATAGTAACAACTCGCTGT---TTGATTTCAACCTGATTCCCACCCT-----TTCTCTCTGAGATCACTT-TCCATTTTCTGCATGCATATGGATTGGCTCCCAGGCGAACTTTTCTGAGACAAGAGAAGAGACATATTAGCCCACAGGACACAATAGCCCTTTCCTAGTGTGTTTTTGTGTTTTCTCTATAATATGAAGATGCTGATCAACAAATCAGATGGATCACTGGCTACAGCCTACATTTCAGAAGGAAAAAGTATGTTTCTTGAAATATTTCTATTAAATTGAACCCCATAACCTTCTGAGACCTTTGTGCTCTGTAAAATAAGAAGCCCCCAAGCTGAAAGGTGAATTCCCTAATTAATCTGCCTGTGTCAGCTCTATCAGGGTGCTTGGAGGGAAGCAGCTATTCTGGGAACAAACCTCCATTCATAAAT-------GCAAG---ATTCAAGTTAATTTAGTTCAAAGGAAGACAGAGAGACATAGAAATCACTGAACTCCCTACAAGAATTTCTTGAGGACAGTAGCCATTGTGTAGGAAGCAACCAGGCACCAAAGGAAGAAACTTGTGGAAATCACTTTAAAAACAACAACAGGAAAGAAGAATGCT--------------GTTTTTTTTTCTTGACTTTTTTTTTTTTTAAAGGAAATCTGGGCTTATGGCAGGCCCAGATAAGGGAAGCTGCGTGAATCTCAGT-CAGGCACTCTCTCTATCTTTCCCCAACATCAATCAGTGCACTTCCTTTGAGATAC--ACTTTCACACA---GATAAAGAGCACTGTCACACTCAGTGCTTGA---GCATAAGGAGAAAAAAACAACAACCACAAAGGTCTGCAATTAGCATAAACAGCAAGTTTCCTGTGTTTG--GGACTGAGCCCAATGGGAGAGCTGACAGGGGTGGGGGGCACAAAAATAGCTGTATTTGAAACCCATCATGGGTCAAGATGCCCTTGAAGAAGG-----CTTGAAAGCAACAAGCCAGCGTTGCCAGCTCCTCACCACAGGTGGCCCTTGTCAACCCCCTCTCAACTCCCTGCCCATGAGTCAGCAGAGCCTGACTGCCTACTGAGTACAACGATCTTCTTTGTTGGCAAGTGAAGTCATTTTGAGCCTACAGGTGTCATGAGCAAAATCTCTCATGACTTAAGAGGGAGCAAAACCAAATCCTAGGGCTGAATCCTTCAGTGTCCACCACTCTCTGTCCAGCACATATGGCATAGGGAGGCCCCAAACTGCTAGCCCAGCTCAGCTGAGCTCACCTCAAAGCCCAGACACAAAGCAACACCACAGTGAGCTCCCAGCCCCACCACTGCCACTCACTGGGGGCTGAAGGTGCACTCCTCCTCCAGCTGCCAATACCACAGGACG-GCGGCGGGTGGTGGGACGGCATAGATGGTGCACGTGAGTGTCTGCGTTGAGCCATACTTGTAGGAGTCAACAGGGGCCATCAGCGCGTTCTCACCAATCTGGGGGGGGACTGGAGAAGAGA ...x.....x.:..x.....x...:.x....x...:..::x.x.:..:.:....:....:.......x...:........x...:x:.....x.:...x:::..x:------.:..:..:.x.:.x.x.x.x...::xx..x....x..:.---::..x.......::...::.....:...x.:...............::......:.:....x.x:x.x:.:x.::::.xx..x.x..::..:........:.xx..x........x..::..:.:..x..x......:::..:...::.:.x....x...x..x:.:..xx.x:x...:..x.:.x........:....:...-----------.....x.x:...xx...:x.-.:xx...:x.x.x..-------------------:..:...:...:xx..x:xx.:.:x..:.:x::xxx.x....:....x:.....x-----------------..x..:.x.x.----------------------------x.:...x:..:xx:....x..:...x:....--.x..:x...:x..:..:..xxx:x..:.x:::..:..x:...xx.-----..:....-..:x......:.--------..:..--.::.x.:.:....x.:...xx::..:..:x::--:.:.:xx.x..x.x:x:..:..x.-----..x.x.x....x:x...x.xxxx...:...x:x-------...x....:..:-.x..:.----::.xx..x.x.:x..x.x..:..x:.:::x.x:x....xx.------------.::..---...x..x:x..x:..:::..x.----.....:..xxx:x..x.x:...x::.x.:..----.:..x.....x.:x.x-------------.:.x:..:.:...:.:--..:x......----------------:::...:.x::.:..-...xx..:x.-.:x...x.x.x:x...-----------:.x........xx.::..xx.---..x..x...x::xx...::x:xx:.xx..:.x.:..::..:--....x..---...x.x...:.:.--:...x...------------:..x::..:xx:.x..:x.:...:.::.:..xx...--:...x....----------------------.:..::...x::.x:.::....:.::x:..............:..:........x..:..:..x.:.xx:..::..:....:::x..:x:....:..........x..:........:.....:..x........:..:.......:::--x.::....x..x....::..x:...:-.x..::..x:xx...:x....::..---..x.x...-------......:x:...--...xx...--------..:x:x..:..:.xx.xx:::..:..:.:x...xx.:.xx.:.x....xxx:.:-.x..:...::x:xx:.x...---...x.xxx:x:..x.....::.x:..----.x.x:..:x.x.::x.::..x:..---..::::.-.:.x.x::..:x:.....-----.:....:::.:xx..::--......xxx.:x..------------------.:.xx..:.xx.:.x.....----..x.x...x.xx:....------------------------------.x:.x.x...--..x.:...:.:x:..xx.x..x.:::...--------------.:...x:.x:x....--xx...x:x..xx.:..:.:..x...--------------------------:.....xx.:....--------:x:.....x.x:x::...x....:.--..:.x::x:.:..:.:.xx-.....x:..x:.:...x..-----.x......:..---..:------------------------------:.:..:....:.------------------------------------------------------...x.x..x...:.:::.xx.:.-----------------:.....:..xx....:..xx....x:x.:...x.:.x.x.---..:.:.....::.x...:..x....-----.:...:x------.....-......:.:::..x.x:.....:..x.::x.:::.xx.:...------.:.x.x.::.:...x...x:...x..---------------------..x.:..x...x:.x...::.:x..x.x.xxx.::x.:x::xx..x:.x.....-----.x:...:..:------------------------.x....::.x......x:----..xx.x:.x.x..:.:x.:xx.x::...-...x.:..:xxx....--..x.:..x::x.x:x....:.:x:.:x.--------------:..:x..x:::..xx.....:.:.-x........................:......:...........-------:....---...........................:..::..:..x.....::.....::....:..x.:x.......:x:....x:.:.:.x:....x.....:::.:..-...x.x:........:..::.:.x:::..:..:...............-...x:..x....--------------...xx:.x:.x...--..x.x.....:::x.....x:.....:...:..x...:x.xx......xx::..:-:.x..x:..x..x-.x..x:..xxx......x:.x..:xx....x....--...:.....:.....x.:--.::........---:.x..:...x:x...x::.:...x::x::..---.:..x:.........----------x.....:::x..........x.xxx.....:.xx..........--.:.x..x:..:x.:..xx:.x..:...:..x..:.---------xx.....--------.....--..x:..--.:...:.:.:x::x:...:-----.:.:...xxx.x:.xx...x.----------------.x..:...-------------------------------...:------...x:.x.:..:...x:....x:x..--.::..:....----------------x...::..:--------------------....:----.:...:..x....:x.x.:..-------------------------------------------------------------------------------:..........x:xxx.x:x...:----------.x:...:x.xx:..:x....x:x::...---------::......:x...x::.xx..:......:.......:............xx...:.-.xx.....-..x..:.:........:x..:..:..x..:..:..x..x.x...:....x......:..x.....:.xx..:..x.xx.................x.......:...x.:.. 106M6I39M3D203M11I20M1D15M19D55M17D11M28D31M2D45M5D7M1I12M8I5M2I32M2D24M5D33M7D12M1I6M4D41M12I5M3I22M4D31M4D16M13D16M2D10M16D15M1D10M1D16M11D21M3I41M2D7M3D13M2D8M12D36M2D9M22D149M2I26M1D25M3D8M7D12M2I8M8I54M1D20M3I26M4D24M3D7M1I18M5D17M2I14M18D20M4I17M30D10M2D29M14D15M2D25M26D14M8D25M2I19M1D19M5D11M3D3M30D12M54D23M17D40M3D25M5D7M6I5M1D42M6I26M21I54M5I10M24I18M4I28M1I16M2I28M14I24M1I44M7D5M3D103M1I48M1I12M14D14M2I55M1I13M1D35M2I18M2D11M3D31M3D15M10I44M2D35M9I7M8I5M2I6M2I19M5D21M16I8M31I4M6I26M2I10M16I9M20I5M4I21M79I24M10I28M9I56M1D8M1I112M 1748/2798 62.5% 3185/94230402 0.0% 859/2798 30.7% 27940645 NA +3107 chr4 + 190214555 55108716 55108715 55108785 70 CTCCCTTTCCCTCTTCCCCTTTCTTCCTTCTCCCTTCTCTCACTTCCTTCTTTCTTCTCTCCCTTTTTCC chr4 - 94230402 83554912 83554911 83554981 10675422 10675421 10675491 70 CTACCTTGACTCATACTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCC ..x....xx.::x.x.:.x.......:::.:..:x:...:.x.:..........:.:....:...:.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -28446196 -65784206 +6465 chr4 + 190214555 55113301 55113300 55113476 176 TACCATGGACCCTGACAAATGTGCTGTTCTTCTTGGTCATCAGCCCACTGGATGCTGCACAGGTGTACAATCCTTGGTCACTCCGGGTTACACCATCTATAGTTAAGGTGCTCAAAAATTTCTTCATCTCACTCCCAGACTGGGTTTTTAGGTCTC---GGTTTACAAGTTTCTTATGC chr4 - 94230402 27169763 27169762 27169938 67060465 67060464 67060640 176 TACCATGGATAATGAAGTAGCTGCTGTTCTTCATGTTCATGCGACCACTGGATGCTGCACACGTGTATCGACCTTTGTCACTTAAGTTCACACTGTCAATGGTAAGAGTGCTTACAAACGTCTTTATTTCTCCTGCAG---TGGTTTTTAAATCTCTTATGGTTGCACGCTTTTCCTGC .........:xx...x:x.xx...........x..x....xx.x.................x.....:x:x....x......:x:.x.:....::..x..:..x.::.....:.x...:x....:..:..x.::x...---x........::....---x.x..:..x.:..:.:x... 138M3D15M3I20M 121/173 69.9% 176/94230402 0.0% 6/173 3.5% 27943538 NA +7198 chr4 + 190214555 55114122 55114121 55114279 158 TTACCTTCGAAGAAGGGTATTCCCAGTTGAAGTCAATCCCCACATTTAGTTCAGTTCTTGCTGTACAATTTAAGACAAGCTTTTCTCCAACAGATAGTTCAATTCCATGAGACGGACTCAGAACCACATCATAAATCCTATACCCTAGAGCAAGTAAA chr4 - 94230402 27170088 27170087 27170245 67060158 67060157 67060315 158 TTACCTTGATGGAAGGGTAGTCCCACTTAAAATCAATTCCCACGTTCAGCTCTGTCCTTACAGTACAATTGAGAACTAGTTTTTCTCCTACCGCCAGCTCAACTTGGTAGTGTGGGTTCATTGTTAGATCATAAATCCTATAACCTGGAGAAAAAAAA .......x:x:........x.....x..:..:.....:.....:..:..:..x..:...:.x........x.::..x..:........x..x.x:..:....:.:x:.::x::..::...xx:::.x...............x...:...x..:x... 158M 110/158 69.6% 158/94230402 0.0% 0/158 0.0% 27944034 NA +14478 chr4 + 190214555 55114850 55114849 55115461 612 TATGGAAAGGAAATGTCCTCTTACCTACAACGACAACTATGTACATAATAGACTGGTAACTTTCATCATTAATTTTTGCTTCACAGAAGACCATGCCAGCATAGCTGATCATGTAGCTGGGAATAGTAAAGCCCTTCTTGCTGTCCCAGGAAATTCTGTTACCATCAGGAACAAATCTCTTTTCTGGGTATCTCTGGGTAATAAAAAGACATATCAAATATTTAATCCAGTACCAAAAATGAGAGCCATGTACAATGATCA-CTGAAGAATTCATCTTATTTTTAAGAATACTAATTAGTTTTATTCATTGCATTTGA---------CCCTTCCTAAAGGAT---------CCTTAAAACT-------CATTGTG----------------------------------------AATATTATAAACAGGTT--------ACCCATCT------------TAATATTAGCTTAAAATT-------ATAAAAACTTAAGAGACGATTGGAGGAGATGCAACTTACTGCACAAAGTGACACGTTGAGATTTGAAATGGACCCGAGACATGGAATCACCACAGTTTTGTTTTTGTTCTCAGTAATGTACACGACTCCATGTTGGTCACTAACAGAAGCAATAAATGGAGATCTGTAATCTAGAAGAAAATTTAGTTTTATTAATGAGTTAATAGTAT--TTACTAGAAAA chr4 - 94230402 27171217 27171216 27171897 67058506 67058505 67059186 681 TATACAGAAAAAACTTGGGCTTACCTACAACCACGACGATATATATCACAGACTGGTAGCTTTCGTTATCTATTTTAGCTTCACAGAAGACCATGCCTGCGTAGCTGATTAGATGACTGGGTATAGTGAAGCCTTTTTTATTATCCCACGAAATTGATTTGCCATCAGGAACAAATACCTTTTCTGGATATTTCTGTTTGAAATAGTAACA----AAATACATTGTCAGGTTTCGAAATC--AAACAACTTCGGATTTTCAGGTGCAACATTTTCCATGTCAGCCAGA-----AGCCAGTTTTA-GCATCTCAGCTCAGGCTCTGCTCCCTTCGTGGGCAATCACCCCACACCTTCAAAGCACAGGAGCATGGTGACGCACAGTTACAGCACTCACCACAGGCTGCAAAGTTCCCAACAAGGGAAAGAAGTTTTCAAGAAACACATCTATAGCTCGGGCAAAATATTTACATCACAGTGATTTCAATTAACTCTTAAAATA--ATAACAAGAG-TTTTCCTTACCGCATGTAGAGATACATTGAGATTTGACACAGTTCCAAGGCATGGTACTACCACAG------TTTTATTCTCAGTGATGTACACAATGCCAAGCTGATCACCAACCGAAGTCACAAATGGAGATCGGTAATCTATAAGAATATTCA-----ATTGGTAAGTTTGTCGTGTGATTACCAAGGAA ...:x.:.::...:x.xxx............x..:..x..:..:..x.:.........:.....:.:..:x.....x....................x..:........:.x:.::.....x.....:.....:..:..::.:.....x......xxx..:...............x:.........:...:....xx.:.x.x.:x:...----.....:x.x:..x:..x:.:...x:--:.:.x.:x.xx:..xx...-x..x.:x...:x:.x.:.:xx:x...-----.:::.......-x...:x..x:.x.---------......x.:::x:..---------....x...x:-------...x...----------------------------------------..:.xx:x...x.:...--------..x.....------------x......x:.x.x.x.x.-------..x..xx.....:.x.--..x:x.:...-.x:xx.....:...::x..x..:..:...........x.::.x:..:..:.....x.::.......------....:........:........:.:x...x.:..:....:...x....:x.:...........x........x.....x...:.-----...::.:....x:.x..:.--....:.:::.. 211M4D25M2D19M1I26M5D11M1D13M9I15M9I10M7I7M40I17M8I8M12I18M7I16M2D10M1D66M6D84M5D19M2I11M 405/586 69.1% 681/94230402 0.0% 121/586 20.6% 27943633 NA +9785 chr4 + 190214555 55118598 55118597 55118806 209 ACTTACCTTGAACATAGACATAAATGACCGAGGCCAAGTCAGTTTCCCGGTAGAAGCACTTGTAGGCTCCAGTGTCATTTCCGATCACTTTTGGAATTGTGAGTGTCTTACAGAAGAGGCCATCGCTGCACTCAGTCACCTCCACCCTTTGCTCACTGCCACTCTGATTATTGGGCCAAAGCCAGTCCAAGTCCCTCTGTCCCCTGAAA chr4 - 94230402 27172273 27172272 27172481 67057922 67057921 67058130 209 ACTTACCTTGAACATAGACATAAATGGTTGTAGCTGCCTGGCTGTCTCCGTAAAGGCACCTGTAGTCCCCGGTGTCGTTGCCTATGACTCTGAGGAGGGTGAGGGTCTTGCAGAAGGGGCCATCGCTGCAGCCCGTCACAGCAAGGCGCTTCTCAGCACTGCTCTGGTTATTGGGCCAGGACCAGTACACGGCCCTCTGACCACTGGAA ..........................:::.x:..::xx.x:x.x..:.x...:.:....:.....x.:..:.....:..x..x..x...:.x:.:.xx.....x.....:......:.............x:.x.....xx.x.xx.x:.x....x::.::.....:...........:::.....x..x.x.......x..x...:.. 209M 149/209 71.3% 209/94230402 0.0% 0/209 0.0% 27946325 NA +15371 chr4 + 190214555 55121038 55121037 55121600 563 CACTCAATAAACAATCAGTTACTTAACACAAGAAATCTAGATCTAGAATGAATCCTTACCTGCAAGTAATTTGAAGAGTTGTATTAGCCTTAATTGTAAGTATGTCTTTTTGTATGCTGAGCCTGGGCAGATCAAGAGAAACACTAGGCAAACCT-----------------AGAAACAAATT-------AAATA----AATGAATGTAGTTGCCACTGAGTTAGACC----TAATAGGAAACACCTTCCATAAACAATGCATACTCTATACTTTAAAAGGCCTCTT------CAGCAATTCATTGTATAAAACTGGGAATTTACTTTTCACCATTCTCAGTAAAAGTTCACAAGCTGTGTCATAACAGGAAGAATGGGCAGATGGTCATAAACCAACACAACAGTTCTGCAATTCATGGAGCTAGGGTGGAGTTCCTGTTTTCCTGCATTGCCAACTTCAAGGTCTTACAAAAGGATACGGGACATTGAAACCAAATGAACCTTCATCTGATGATCTCACTCCCTTGGGAAAGGACCCACTGACATTTCTTATAGAACATAGGATGTACACATTTGACT-----AAATTGCTGATTAACGAATCC chr4 - 94230402 27172882 27172881 27173454 67056949 67056948 67057521 573 CACTGCATAAATCACC-----CCTACCAAAATGAATGTACA-----GATTGACCCTTACCTGCAAGTAATGTTCAGAGTATCATTTGTGGTTATGGTGAGGACACTTTTTTGGATACTAAGGGTTGGCTGATCCATAGAAA---TAAACAAACCTGTGAAAACTGATATAAAAAAAAAAAACCCTCAGACAAATACAATAACGAAAGGAAATGCTACTCGACCAGAACAGTATTGTAGGAAAGA---------------ATATGCGGCGTGCTTTAAGCGGCCACCTTCACATCATCTACTTAGCAGTGAAAGGTAAATAATGACTTTTCACACATCACAG--AAAGGTCAAAAACTCTGTCATAACAGGAAGGCCAGGCAGATGGTCAGGAGCTGGCTGCAGAGCACGACAATTCAGCCGGCCAGGGTGGAGTTCCTGTTTCCTTGTGCTGCCAACTTCAAGGTCTAACAAGAGGATGTGGAACATTGAAATAAAGTGAACCTACATCTGATGATCTCACTCCCTGGGGAAAGGGATTACAAGCTTCTCTCATAATAAACCAAATACACTCAT---ACTCTCTGAGACTGTTGATCAATGAATCC ....xx.....:x.:.-----.:..x..x..x:...x..x.-----:..x:.:.................x.xx.....xx:...x.:xx.x..x..:..x.::::......x..:..:..xx.x...x....x.x.....---..::.......-----------------.:...x...::-------.....----..:...x.x.:x...:...x::::...x.----.x:.......x.---------------::..:.xx::.:......:x....x.:.------..x.x.:.:.x::xxx...:x.:::x.x.x.........xxx..x...--....x...x..:..x...............:x::............x:.:.:::.xxx.x..:x.x:.......xxx:..:..................:.:..:::.................x....:.....::..:.........:x..:.......x.....................x........:x::..x::.x.:...:...:x.x.:x::..::..x...---...-----.:.:..:....:..:...... 16M5D20M5D95M3D11M17I11M7I5M4I29M4I12M15D28M6I48M2D231M3D3M5I21M 365/530 68.9% 573/94230402 0.0% 76/530 14.3% 27948156 NA +3138 chr4 + 190214555 55133101 55133100 55133157 57 CAAACCACAGA-TCTTCTCTTCAAAAAAAAAAACAACAAAAAAAAAAACAAAAAAAAG chr4 - 94230402 52375084 52375083 52375141 41855262 41855261 41855319 58 CAAAACACAACCTCCTCTCCCCACCAAAAAAAACAACAAACAAACAAACAAAAAAAAG ....x....:x-..:....::..xx...............x...x............. 11M1I46M 47/57 82.5% 58/94230402 0.0% 1/57 1.8% 2758017 NA +3117 chr4 + 190214555 55133122 55133121 55133175 54 AAAAAAAAAAACAACAAAAAAAAAAACAAAAAAAAGGAGCAGTTGCTTCTATAC chr4 - 94230402 19031258 19031257 19031311 75199092 75199091 75199145 54 AAAAAAAAACCCAACAAAATAAAACACAGAAAAAAAGACAAATTACTTCTATGC .........xx........x....x...:......:..xx.:..:.......:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 36101864 NA +3258 chr4 + 190214555 55179519 55179518 55179576 58 ATCAGATTCTTTATACAATTAATTTTTTGTTTTTTTGTTTTTTGTTTTTTGTTTTTTT chr4 - 94230402 4585584 4585583 4585641 89644762 89644761 89644819 58 ATCATGCTGCTTGCTCAATTACTTTGTTGTTTTTTTGTTTTTGTTTTTTTGTTTTTTT ....x::.x:..::x......x...x................xx.............. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 50593935 NA +3750 chr4 + 190214555 55220270 55220269 55220373 104 ATTTAGTCTGTATAACAGCCCTTAAAAGTAGATA-CTATTAGTGTCTCCATTTTACAGATGAGGAAACTGAGGCATGGAGCAATTAAGGTACTTGCACAAGGTTT chr4 - 94230402 10729160 10729159 10729263 83501140 83501139 83501243 104 ATTTAGCCT-CACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ......:..-:.:..:.x....xx:.:....:..-:..:..x::x.............:..:.:...........::x.xx::.....xx.:....x..::..:. 9M1D24M1I70M 70/103 68.0% 104/94230402 0.0% 2/103 1.9% 44491110 NA +9140 chr4 + 190214555 55254135 55254134 55254427 293 ACCACGCTAAAAGGC---TGATAAACCCCAATCTCTTTTCACAGCTGGCCTTCGGCGCCCCTTAATGTAACTCCCTCATTTGTTCATCAGCACTTTATGAGAAAATAAACAAAAACATGGCCTGTTTCCTCATTGTCAGCA----CAT-CAGACACTTCCTGCTCAGAGAGGCCACCATCCCACCCTAAGAGTCAGAAGCCCACTGCCTATTT----TGCCTCAGC-TTTTTAACAGCC-ATTTTCTAAGCTGCATTCCAAGG--GCCTAATCAAA--TCCAAAGCCCCCTGTGGGTGGATGTCATAGACT chr4 - 94230402 27208674 27208673 27208975 67021428 67021427 67021729 302 ACCCTGCCAAGAAGCAGCTGATAAACTCAAATCTCTCCTCTCAGC-------ATGAGCTTCTTAATGCCTCAGCCTCATTTGTTCATCAGCACTTTATGAGAAAATAAACAAAAACACTGCCTGTTAGCCCATTGTCATCAAGGGCATCCCAACACTTCCTGCCGGGAGAGGTACTTGCACCACCCTTGGAG-CAGAGG-CGACTGCATCTTTCTTCTGCCTCTACATTTACAATGGTCAATCTACAAAGCTGGAATCCCAGGGAGCTTAATCAAAAGCCAGAGGACACCCCAGGGTACGTGTTATTGTCT ...x:..:..:.:..---........:.x.......::..x....-------xx.x..::.......:xx.xx............................................:x.......xx.:........x..----...-.x:...........:x:......:xx::::x.......x:...-....:.-.x.....x.x...----......x:.-...x:..::.:.-..:.x.x......x.x...x...--..:........--:.x:.:.x.x..:xx....:x:...:..x.x.. 15M3I27M7D89M4I3M1I43M1D6M1D13M4I9M1I12M1I23M2I11M2I33M 210/284 73.9% 302/94230402 0.0% 27/284 9.5% 28045461 NA +10136 chr4 + 190214555 55256819 55256818 55257180 362 TAGATTATCTGTAAACCAACTGACAGGTATCCAATGCAGACCA---TGTGCAGACGTTTCTTTCCCCTCTATCACTGCCCTCAGATGATGCCGTGAAAAGTAAAAGTTCATCAGATGCTGACGGGG-----------------TTCGTGATAGAGCTGCACTGTGAATTCCTAAGGCTGAGGGCT-GTTTGTGATTTATCACTGCTCCTGCTTATCTGCCATGGAGTGA--CTTTCCTC------CACTTAAA--TAGCAGCCTGCTTCCCTCCTGTGGCTCCATCTCGGTTGCCAAGGTTCTCTAAATGCTAATCAGGAGATAGAGGACATTCTGTGATCTTGTGAAGTGCTCACCCAGCAATTCGGTAAAAACA---GAGTGCAAACATCATGC chr4 - 94230402 27210322 27210321 27210706 67019697 67019696 67020081 385 TAGAGTACTAACAAAACTACCAAAAGGCAGGCACTGCTCACTAATTCTTGCTAACTTTGCTTCTTGTTCTGCCA---------GAGAGCATTTCAAAAGGCAAATCCTCATCAGATATTGGGGAGGGAGGGAAGGGAAGGAAATTCATGACAGA-TTGTGCTGTGAATTCCTAAGCCTGAAGTTTTGTTTGTGATTTATCATTGCTAAGCCTTATCAACCACTGATTGAGTCTTTCCTCTCTCAGCCCTTGAGGGTGGCAGGCT-CTGGTCTCCTGTGGTTCCCTCCCGGCCCACCAGCTTCTCTAAATGCTAATCAGATGATATGGACCCTCCTGTGATCTTGTGAAGGGCTCTATCAGCAGTTTGGTAGAAACACCGTAATGTAAAAATGATAC ....x..::x::...x.x..::.x...:.xx..x...xx..:.---:x...x:..x..x...:::x:...::..---------..x::::::x::...:.:...xx:.........::..:x.:..-----------------...:...:...-:..::...............x....:.x:.-...............:....xxxx......x:...:x..x...--........------.x...:.:--.:....x..-..xx:.........:...x..:...::xx.x..x...................:x....x:.:x.x.:................x....xx:.....:..:....:.....---x.:..:...x..x..:. 43M3I28M9D43M17I11M1D30M1I43M2I8M6I8M2I9M1D111M3I17M 243/351 69.2% 385/94230402 0.0% 45/351 12.8% 28046497 NA +17053 chr4 + 190214555 55258550 55258549 55259546 997 TTCATTAATGTCAGGCCTGGTTTTAATATTAATTGCT----------CCGGGTCAAGTTCAGAT------------GCAAAAAGCACAAGCGTGCAAGTAGATACAACCTGATGTGTTTATCTTTTCAGTGCACACTTTCTGCTGCAGGCGTGTGCCAGATGTAGCAGCAGCTGTAGGAAGTTGTTTATCTACCCTCTTAACCTTTGTAAAGTGTTAAGAGATGGCAAAAATCATGTTTTTAAATCATAGGCATCAC--CATCCAAACTAGTATCTTCTTAGTATTAGTCAAAACACATCAATAAAGGCATAAGAAGGTCAAGAAGATTTGATTGTGCCCCAATGATATCTGTTAAAACATACTTCTGCCATGATTTACATGCCCCAATAGCTCTCTGCTTATTTCCAAATGCACTTCACCCATTCAACATTCAGAAAATATTT-----CTTGAACTCCCACTGTGCACAGGCCACAGTTGAAAGGTACTGGTTAGGTAACGCTAATACCTGTAACATTTGTGTCTTGCCTAACGTTTTACAAAT---GTCAGTTGTTCTTTGTAA---ATTTATCCT----TTAAAATTTTCAAAA-TATATTAATAGTCC------CAGAAT-----GAG--------AGATAGTTGAAAATCTTTA-------GGCATTCTTGTTAAGAAAACATTATTTTGGGGGCTCATA-------GCCAAATATCAAAATTTCAGCATCATGTGACATTTTTCTTGCAGAGAAGAGAGCT--TCAGCCAAGCTTCAGAGCCATGCAGCTT-CTGTACTGATGGGCT--TCCCACTCACA--CCTG------------CAGGGATTATGCTAAATGCAAGTGGGATTGATCTATCAACCTAATCACTCATGAGAAATAATAACAATGTCATTAACTAAGTTTCCAAAACAACCCAG-TTCCTGCTTGAAAGTCAATCCTTCAGAAGCATGCTAAGCCTTACTTTTGTTTTGACATTTGGATGAAGTCGCAAAGTTTCCTTTGGCCTTTCTCTGTCAACGTCAATGTCCTCTAGGGAAACCAGTGTGACGATATCAAAAGACAAA chr4 - 94230402 27212690 27212689 27213708 67016695 67016694 67017713 1019 TTTGTTAGCAGCAAAGCAGCTTCAGACATTAATTACTGCTGGCACTGCAGGGCCAAGTTCAGTTCCCTAAGCTTTATCCAGAAGAGTAGGAGACTATGGAGATACAGCCTGATATGTTTATCTTTGTGAAGCACGCTCTCTGCCTCGGTCGTGTGCCAGATGTTGCCACAGCTGCAGGAAGTTGTTTATCTGCCCTCATGACCTTTCAGAAGTGTTGGGCGATGGT-AAAATCATGTTTTTATA----GAGCATCTCTTCTCTTTAACTGGAAACTTTCCATCAGCAGTTAAAATAGATTTTAAATTCTATAAGGAAGCCAGGGA---TTGGTGTTGTA-----GATATCTAT---AATCTAATTATATCCTTTACTGTGTGCTCC---------CTG------TAAGAGTTTACTTTAGGGAGCTAGCGT---GGAAAAACCTGGCCACTTGAACACCTGTGGT-----AGCTACTGTTAC----TGCTACCTTTCTAA-------ACCTGCAAAGTCTGTATGTTTATT-ACTTTTTACATCTCTAGACATTAGATTACAGCGAGTGACTCAGCCTATGGCTGAGTTTTCCAGGACTCTGGTGGCATCCCGTTGCTCAGCACTCATGGAGTTCTCCTTGGTCACTTAAAAATGTTGATCTCTACAGTGCTCCCAAGAAAAAAAAAGCATGCTGTGTG-TCAGATAATTCTGCCAA--AATAAATTCACAGCTGCAAATGACACATC----------AAGAGCATTTCTCAGCGGAGCTAGATACTAATACACATTGATTGATCAATGGTATGGTGTAAGTGATAGTCCTGAGCATGGGAGAAAAAGAATTAAGCAAAATACAAGTGGTATGTATCCATCAACCTTATCATTCAGGAGAAAAAATAACAGTGTCATTAGCTAAGTTTCCAAAATAGCCCAGTTTCCTGCTTGAAAGCCAATCCTTCAGAAACAGGTTAAGCCTTCATTTTGTTATGACATGCTGGTAAAGTCACAAGGGTGTCTTTGGTCTTTTTCTGTCAACATTAATGTGCTAAGTGAAAATCATTGT-------TCAAATGAAAAA ..::...:::x..::x.x.x..:x:.:.......:..----------.x...:.........x.------------x.x.:...x::.:.x.xx:.x.x.......:......:...........x:::x....:..:.....:x.:.x..............x..x:......:................:.....x.:......xx:.......::.x.....:-...............x.----::.....x.--.x:::x....:.x.x...:::.x:.x:...:....:.x..:xxx..xxx:.....:.:.:..:.:.---...:.xx..:x-----.......:.---..:x..x..x.::.x.xxx:.:::...:..---------...------.xx:.:.x:....:.xxx.x::.:.:.---.:...x.::.-----.......x..:::x..-----:..:..x...:x----.:..:x:.xxx...-------.....:..x:.:...:.x..xx:.-..x.......xx.---.x..x.x.x.:x:x.::.---.:.:.x...----:.:.:x...:..::.-.x.:x.:::.x:..------...x.:-----...--------:.x:.x..:.....x..x.-------:.:::..:::xx..:....x.x:..x:..x.x.-...x.-------.....--.x:...x.:x....xx..x:.....:x.:----------.....x::.--.....x:....xx.x.x:x..:..xx..-x.xx.:::....xx.--.x:x.x.x.:.--....------------x.:.:....x..x....:.......x..xx...:........x....:...x......x.......:........:..............:.:.....-..............:.............:..x.:........xx.......x......x:x.:.:.....:...:.x.x:......:....:.........:.:.....x..xx:x.:...:..x...-------.....x..x... 37M10I17M12I150M1D17M4D9M2I66M3D11M5D9M3D30M9D3M6D27M3D10M5I16M5D12M4D14M7D24M1D13M3I18M3I9M4I15M1I14M6I6M5I3M8I19M7I33M1D5M7I5M2D29M10D9M2I28M1I15M2I11M2I4M12I98M1I128M7D12M 619/926 66.8% 1019/94230402 0.0% 164/926 17.7% 28045860 NA +3075 chr4 + 190214555 55325414 55325413 55325487 74 GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGACAAAAAAGGAAAAAGT chr4 - 94230402 32767839 32767838 32767912 61462491 61462490 61462564 74 GGGAGAGAGCTGGAAAGGGATTGAAGAGGGAAAAAACCTGGGAAGGGAGGGAAGAAGACCAAGAATAAAAAAAT ..:..::..xx:.:....:.xx:.:..:.....:..xxx:............:.:....x..:..x:.....:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 22557575 NA +3675 chr4 + 190214555 55326272 55326271 55326338 67 CTACAACCTCCACCTCCTGGGTTCAAGTGATTCTTATGCCTCAGCCTCCCAAGAAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .....:..:xx.x..:.............x...x:.x.x........::....x......:.:.... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 37129146 NA +5826 chr4 + 190214555 55346310 55346309 55346561 252 GCAGCGCGGAAGGCGGGCACGCGGGCCATGGCTCCCTGGGCGGAGGCCGAGCACTCGG----CGCTGAACCCGCTGCGCGCGGTGTGGCTCACGCTGACCGCCGCCTTCCTGCTGACCCTACTGCTGCA----GCTCCTGCCGCCCGGCCTGCT-----------CCCGGGCTGCGCGATCTTCCAGGACCTGATCCGCTATGGGAAAACCAAGTGTGGGG-------AGCCGTCGCGCCCCGCCGCCTGCCGAGCCTTTGATGTCCCCAAGAGGTAA chr4 - 94230402 27224269 27224268 27224530 67005873 67005872 67006134 262 GCGGAGCGG--GGCGGGCCTGTGGCGGGCGGTGCTC----CGCAGGCCCCGCGCCTGGGCCATGCCGGCCGTGCTGGGCGCTGCCTGGGCCCTGCTGGCCGCCGCCTTCCTACTGCTGCTGCTGCTACACCGGGCCCAGGCGAGGCGGCCCGGTGGAGGCACCGACGTCGCCTCCGCATTTTTCCAGGATCTCATCCGCTACGGGAAGACCAAGAGAGGCGGGCAGCAGGCTGCCTGGCTGCACCGCTTGCAG----------GTGCCCAAGAGGTGA ..:.x....--.......x:.:..xxx::..:x.:.----..x.....xx..:.::..----:..:.:x.x:....x....x.:x...x:.x:....:.............:...x:x..:.....:..----..:.xx..x:xx.....:.x.-----------.x:x.x..x...:x.:........:..x........:.....:......x.x..x.-------:..:.:.xx..:x.:....:...x.----------..x..........:. 9M2D25M4D18M4I67M4I21M11I56M7I25M10D15M 160/236 67.8% 262/94230402 0.0% 42/236 17.8% 28122041 NA +3063 chr4 + 190214555 55349110 55349109 55349183 74 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTCCCTCAGTCTCCTGAGTAGCTGGGACTAGAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:...........::x...x.xxxx.....:..::::.........:....x.x...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 37151984 NA +3029 chr4 + 190214555 55362418 55362417 55362476 59 ATCCAGCCTGTTTCTTTTGTTTGTTTCATTTTTTTCTTTCTTTTTCTTTTTTTAAGAGA chr4 - 94230402 35056079 35056078 35056137 59174266 59174265 59174324 59 ATCCAGTGGGATTTGTTTGTTTGTTTCTTTGTTTTGTTTCATTTTTTTTTTCTGAGAAA ......:xx.x..:x............x..x....x....x....:.....:.:...:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 20306339 NA +10245 chr4 + 190214555 55364061 55364060 55364277 217 TTCTGAATTGTAGGAGGGGAGCTGGCACTG-TCTGCATTCTTAGTGCTAGTATTTCTGTGGCTGCACAGCTTACGAAGACTCTTCGAGTGCCTCTACGTCAGTGTCTTCTCCAATGTCATGATTCACGTCGTGCAGTACTGTTTTGGACTTGTCTATTATGTCCTTGTTGGCCTAACTGTGCTGAGCCAAGTGCCAATGGATGGCAGGAATGGTGAGT chr4 - 94230402 27227264 27227263 27227481 67002922 67002921 67003139 218 TTTTTATTTGTAAGCAGATAGCGAAAGCTTCTCTGCACTCTTGGTTCTCCTGCTCCTTTGGCTGCATAGCTTTCAAAGACTTGCAGAATGCCTCTATACCAGCGTGTTTTCCAATGGCGTCATCCACATTGTGCAGTATTGCTTTGGACTTGGCTATTACGTTGCTGTTGGCTCAACTGTGCTATGTCAAGTACCTACTAATGTTAGGAATGGTAAGT ..:.x.x.....:.x:.:x...x::x:..x-......:....:..x..xx.::.:..x........:.....x.:......:x:x..:........:::...:..x..:.......x.:.x..:...:.:........:..:..........x......:..:x:.......::.........:x.:.....:..x.:x:...x:.........:... 30M1I187M 154/217 71.0% 218/94230402 0.0% 1/217 0.5% 28136797 NA +4138 chr4 + 190214555 55368500 55368499 55368582 83 CTGCAACCTCCGCCTCCAGGGTTCAAGTGATTCTCCCGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCGCACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCACTGTG ..:..:..:xx:x..:.x...........x...x.xx.x........:............:......x..--........:.. 70M2D11M 63/81 77.8% 81/94230402 0.0% 2/81 2.5% 37171374 NA +4379 chr4 + 190214555 55369108 55369107 55369207 100 ATATAGCTTCACAATGCCGACATGAGATG----ACTACAGTCCGGTCTTCATTTTACAGATGAGGAAACTAAGGCACAAAGAGGTTAAGCAACTTATCTAAAGT chr4 - 94230402 10729160 10729159 10729261 83501142 83501141 83501243 102 ATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAG--CTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ..x....:.......:..xx::....:.:----.:...x:..x.--..:..........:..:.:.....:.......x.x........:..:..::.:.:... 29M4I11M2D58M 72/98 73.5% 102/94230402 0.0% 6/98 6.1% 44639948 NA +12530 chr4 + 190214555 55369825 55369824 55370132 308 CTTTCAGGAGTGGTCATTCACTGTAACCACAGGATCCCATTTGGAGACTGGTTTGAATATGTTTCTTCCCCTAACTACTTAGCAGAGCTGATGATCTACGTTTCCATGGCCGTCACCTTTGGGTTCCACAACTTAACTTGGTGGCTAGTGGTGACAAATGTCTTCTTTAATCAGGCCCTGTCTGCCTTTCTCAGCCACCAATTCTACAAAAGCAAATTTGTCTCTTACCCGAAGCATAGGAAAGCTTTCCTACCATTTTTGTTTTAAGTTAACCTCAGTCATGAAG-------AATGCAAACCAGGTGATGGTTT chr4 - 94230402 27229285 27229284 27229596 67000807 67000806 67001118 312 CTTACAGGAGAGGTTTTAAGTCTGCACCACAGTATACCTTTTGGGGACTGGTTTGAAAGAGTTTCTTGCCCTCATTATTTTGCAGAACTCCTCATCTATATATCCATGGCCATCACATTTGGATTTCACAACGTGACGTGGTGGTTTGTGGTGCTGTATGTCTTTTTTAACCAGACGCTGGCTGCTGTTTTGTGTCATGAGTTCTATCAGGAAAAATTTACCTCCTACCCAAAGCATCGAAAAGCATTCATACCATTTATTCTTTAG---AACATGCCTTCTAAAGTGTATTTAGTGCAAACTGGGAAATGTTTT ...x......x...:x.xx:::xxx.......x..x..x.....:............x:x.......x....x.:..:..x.....:..xx.x.....::.x.........:....x.....:..:......x.:..x......:.x......x::x.......:.....:...:.x...x....:x..:.xx.:..:x.:.....:x.:::x......::...:.....:......x.:.....x...x........x.x:....:---...x.xxx.:x.:...-------.:.......::..x:...x... 267M3D16M7I22M 216/305 70.8% 312/94230402 0.0% 10/305 3.3% 28140540 NA +3290 chr4 + 190214555 55402304 55402303 55402428 125 CAAAAATACGTAATGAAAATTAAAATACTTTAATGTT-ATCTTTCGAAATCAGG----------TTTATCTGTGGTGT----CATTGTTTAAGTGCGTGCGTGTGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 9151764 9151763 9151893 85078510 85078509 85078639 130 CACAAATATGTAAT----------ACACAATAATGTTCAGCTACTGAGGTAAGGAGATGATGGCTTTTCCAGTGATGTAACACAATCTTTCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ..x.....:.....----------.:..xx.......-.x..x::..::.x...----------...x:.x...:...----..x.x...x.:...x.x:xx..............:........x....x.:....... 14M10D13M1I16M10I14M4I58M 86/115 74.8% 130/94230402 0.0% 25/115 21.7% 46250540 NA +3021 chr4 + 190214555 55402385 55402384 55402443 59 GTGCGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTT chr4 - 94230402 50558510 50558509 50558568 43671835 43671834 43671893 59 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTT ....:.....x.........::..:.:....:..:....x.:.x.x.x.xx........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 4843875 NA +3223 chr4 + 190214555 55402386 55402385 55402468 83 TGCGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882855 78347548 78347547 78347630 83 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTG ..x..............:.......:..xx.:.:.xx:.x.x.x.x.xx...x....x..x.....:x.xx......:..... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 39519613 NA +3069 chr4 + 190214555 55402390 55402389 55402466 77 TGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882849 78347554 78347553 78347630 77 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTT ..x............:.........:..xx.:.:.xx:.x.x.x.:..x...x....x..x.....:x.xx...... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 39519617 NA +3200 chr4 + 190214555 55402391 55402390 55402467 77 GTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882776 15882775 15882852 78347551 78347550 78347627 77 GTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTT ......................:..xx.:.:.xx:.x.x.x.x..x...x....x..x.....:x.xx......:.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 39519615 NA +3061 chr4 + 190214555 55402392 55402391 55402467 76 TGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882848 78347555 78347554 78347630 76 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTT ..x..........:.:.........:..xx.:.:.xx:.x.x...:..x...x....x..x.....:x.xx..... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 39519619 NA +3005 chr4 + 190214555 55402395 55402394 55402444 50 GTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 34066892 34066891 34066941 60163462 60163461 60163511 50 GTGTGTGTCTCCACATTTATATATACACATATATATATATTTATTTTCCT ........x.x:.:..x........:.:..............x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 21335503 NA +3291 chr4 + 190214555 55402400 55402399 55402455 56 TGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::...x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -37332948 -56897454 +3627 chr4 + 190214555 55402402 55402401 55402457 56 TGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x.....:...:..:.:...............:.x.........:.x... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% -37332946 -56897456 +3131 chr4 + 190214555 55402403 55402402 55402487 85 GTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT-TTTTTTTTTTTTGAGACAGAGTCTCACTGTCA chr4 - 94230402 4865453 4865452 4865538 89364865 89364864 89364950 86 GTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTACAAAAGACATTCAGTATCA ...x.x..............x.:x.x...x.xxx.:.........x..x....-..........:.:x:.x...xx:...x.:... 53M1I32M 62/85 72.9% 86/94230402 0.0% 1/85 1.2% 50536950 NA +3144 chr4 + 190214555 55402404 55402403 55402463 60 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681944 56681943 56682003 37548400 37548399 37548459 60 TATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .....x:.:....x:.:...:....:..x:.......x...x...x....x......... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -1279540 -92950862 +3282 chr4 + 190214555 55402404 55402403 55402459 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -37332944 -56897458 +3068 chr4 + 190214555 55402406 55402405 55402461 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -37332942 -56897460 +3043 chr4 + 190214555 55402408 55402407 55402469 62 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::....x.....:...:..:.:....x.x.x......:.x.........:.x...:::... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -37332940 -56897462 +13806 chr4 + 190214555 55411608 55411607 55411878 271 TTCCAGAAAATATTTACACCAGCAGCTCCAGTTCATACCAATAAAGAAGATCCTGCTACCCAAACTAATTTGGGATTTATCCATGCATTTGTCGCTGCCATATCAGTTATTATTGTATCTGAATTGGGTGATAAGACATTTTTTATAGCAGCCATCATGGCAATGCGCTATAACCGCCTGACCGTGCTGGCTGGTGCAATGCTTGCCTTGGGACTAATGACATGCTTGTCAGGTGA------GTGTGCTTTTCCCTCTCATG----AGTTCGCTGAATTAA chr4 - 94230402 27233821 27233820 27234101 66996302 66996301 66996582 281 TTACAGAAGGGGCCCTCGCCAGTTGCTCCAGTTCATCTTGTCAATGAAGAGTCAACTGACAAGACTAATTTGGGCTTTATTCATGCATTTGTGGCTGCTATATCGGTCATCATTGTATCAGAGCTTGGAGATAAGACCTTCTTCATTGCAGCCATCATGGCAATGCGATACAACCGTTTGACTGTACTGGCTGGTGCTATGCTTGCCTTAGGACTGATGACGTGCTTATCAGGTTAGCCCTTGTGTTGTTTTGTTTTGCATGTTTAAATGTGCTGGATAAA ..x.....::x::::x.:....:x............x:::x:..x.....x:.x:..:x.x.:...........x.....:...........x.....:.....:..:..:........x..::.x..x........x..:..:..x....................x..:.....::....:..:...........x...........:.....:.....:.....:......x.------....xx....x::.:x....----.:.x:....:..x.. 236M6I20M4I15M 204/271 75.3% 281/94230402 0.0% 10/271 3.7% 28177787 NA +18860 chr4 + 190214555 55417047 55417046 55417992 946 AAACATACTGTTGTATTTTTTCCAGTTTTGTTTGGCTATGCCACCACAGTCATCCCCAGGGTCTATACATACTATGTTTCAACTGTATTATTTGCCATTTTTGGCATTAGAATGCTTCGGGAAGGCTTAAAGATGAGCCCTGATGAGGGTCAAGAGGAACTGGAAGAAGTTCAAGCTGAATTAAAGAAGAAAGATGAAGAAGTAAGCC---------------------------ATGGCACTGTT---GATCTGGA---CCAAAAAGGCAC---------------------TCAACTAGG-----------------------AATAAAC---------ACTCTACAGAGG---------------TTTCTCAGTGG------CCCCATCTGTGTGATATGC-----------------GGGGCTACAC----AAAAATAGCTTCTTTTGCTTTGTTCTGTTCTTATACCTGTCTGTGAT--CTGACTTGGGGTTGGTGTGAATGTAGTAGAGAAAGGAAGCTGACAGATGAATACTGAACACAGGTAATC-AGTTTCCTTAATTAGGTTGATTATAAGCTCCTGA----AAAGCAGGAACTGTATTTTATAATTTTACCTGTTTCTCCCGTGGTGTCTAGGATAGTAAGTGAGCAG----------AGCAGTAAATACTGTTTGGTTTGTTCAGCTGAGGAGAAACGG-AAGAATTGAGACTAT-AGCATTTGTTGCTGTGTGAGACCAGTGGTTCAGAGGGGAGGTTTGGGGGTCACA-TAAATGTAGTTTTTTTGGAGCATATTT----------CATAGAATTTAAACACT----------------------------TAGAA-----------AAGTCAAGTGATTT---------GTGTGCTATTTTGATTTGCTTCCTG---TGCTTACTTTCATTTGTTTATT---ATTTATTTT---------AGTTTCAACGAACCAAACTTTTAAATGGACCGGGAGATGTTGAAACGGGTACAAGCATAACAGTACCTCAGAAAAAGTGGTTGCATTTTATTTCACCCATTTTTGTTCAAGCTCTTACATTAACATTCTTAGCAGAATGGGGTGATCGCTCTCAACTAACTACAATTGTATTGGCAGCTAGAGAGGTGAGTG chr4 - 94230402 27236205 27236204 27237310 66993093 66993092 66994198 1106 AATTATGCATTTGTTTTCTTTTCAGTTTTGTTTGGCTATGCCACAACAGTTATTCCCCGTGTGTATACATACTATGTGTCAACTGCACTGTTTGCAATTTTTGGCATCAGAATGCTTCGAGAAGGCTTGAAAATGAGTCCAGATGAGGGCCAGGAAGAGCTGGAAGAAGTTCAGGCAGAAATTAAGAAAAAAGATGAGGAAGTAAGTCATCAACTCTCTTTGTGAATTATGGCTGATGAAACAGTTATGGCTTTGAAGTTGCAAAGCAGCACTAAGTTTCATGTTTGGGGTGTTCAGCCATGGCTGCAATTAATAAGTCTAACACAACAAACGTGTGGTCAGCTGGACAGAAGTGGCCATATGAAGGCTGTTTCAATAGATGATTCCAGATCTGTGGCATATCCTACTTCTCTGGAGAAAAGGGGCTTTCCCTGTAGAAtttctttctttttttttttttttttttttAAATGGTGTGTGCTAACAGACTT--------TATAAATGC--------------TCTGATCCACTTCTAAGGAATA---GTGATCTTGTTTCTCTGGGCCAATT--TTATCCACTCCTGATTTGAGAGCCACCACT-----------TTTGAAGGGAGATTCCTGC----CTTAGAATAGGTGGGAAGCAATCTGTCGTTTGAAACTAGATATTGTTCCTGTTGT--AACTGCTATGTGATTGCAAGATTTAAAACTATCAGCAATTG---------GAGA--------TCAGAGGCGatatttatatattatattaaacattatatataCGTAGTAAGCTTTAAAAAATACCATCTAATATAAATAATGTGTTAGTAATGCACAGTCAGTGGCTAATAGCATTCCAGATGTTAAATTAACAGCTTTACAGTTGAAGTATTTCATTTGGATTGTTTAGCTGACATTTCTAATCTTATGTATATATTTTAATTTCCTTTGTCTTCTACAGCTTCAGAGAACTAAACTGTTAAATGGGCCAGGGGATGTGGAAACGGGATCAACTGCCACTATACCTCAGAAGAAATGGCTCCATTTTATTTCTCCCATCTTTGTACAAGCGTTTACTTTAACATTTTTAGCAGAGTGGGGTGATCGTTCCCAGTTAACAACCATCGTCTTGGCAGCCAGAGAGGTGAGTG ..x:..:.xx....x..:...:......................x.....:..:...x.x..x..............x.......:.:.:.....x...........:...........:........:..:.....:..x........:..:..:..:..............:..x...x.x.....:........:........:.---------------------------...:x..x...---.x.:..:.---x....:x:....---------------------...:.:.x.-----------------------..:....---------:..xx.....:.---------------.x.:...:.:.------..xx.......xx....x.-----------------......x:x.----.:..x.xx:.......x:...x..:.x..:..xx.x:x..x....x.--.x.....--------.:.:....:--------------x....:xx.:xxx..xx...:.---..:...-x.....::.::x:x::..--....xx:.......----.:...x:xx...-----------...x.xxx.xxx:...:.:----::...:....xx:.x:....:----------::x.x..:...:....:xxx....--.:...xx:x.x:.:x.-....x..:.:.....-....x...---------....--------.......x..x:...:x:x:.:.:.-....::.x:.x.x.x:.x..:.x::..----------...xx...x....:.x.----------------------------...x.-----------..:.:..xx.x...---------..:.x::....x....xx:.xx...---.x::..x.:.:..x.:.x....---....x:...---------..:....:x....:.....x........:..:..:.....x........xx...x:::x..x:..........:..:...:.x...........x.....:.....x.....x:....x........:........:...........:..:..::....x..x..:..x........:............. 208M27I11M3I8M3I12M21I9M23I7M9I12M15I11M6I19M17I10M4I47M2I7M8D9M14D22M3D6M1I18M2D14M4I12M11D19M4D21M10I24M2D16M1I15M1I8M9D4M8D25M1I27M10I17M28I5M11I14M9I25M3I22M3I9M9I192M 631/885 71.3% 1106/94230402 0.0% 282/885 31.9% 28180842 NA +3083 chr4 + 190214555 55421143 55421142 55421223 81 GTCGACAGAGCTAGATTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGACGACTCAGTATACAAATAAAGACTGGAAAGTCC chr4 - 94230402 25488126 25488125 25488206 68742197 68742196 68742277 81 GTTGGAATAATCACATTCCTACTGGAAAAAAAAAAAAAAAAAAAGAGGCCAATTTGGGCAGAGAAAAAGACTGTAAAGGCC ..:.:x.x.:::.x.....xx..x:...................:..:.x.x.:x.x::.x.:.x........x....x.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 29933017 NA +7935 chr4 + 190214555 55424534 55424533 55424659 126 CCAGGACCCCTATGGTGTAGCCGTGGGTGGAACTGTGGGGCACTGCCTGTGCACGGGATTGGCAGTAATTGGAGGAAGAATGATAGCACAGAAAATCTCTGTCAGAACTGGTAAGTCTTGAAAATT chr4 - 94230402 27240119 27240118 27240241 66990162 66990161 66990284 123 CCAGGATCCTTACGGTGTGGCAGTAGGAGGAACGGTGGGACATTGTCTATGCACTGGTTTAGCAGTTATTGGAGGGAGAATGATAGCACAAAAAATTTCTGTTAGGACTGGTAAG---TGAAAACT ......:..:..:.....:..x..:..x.....x.....:..:..:..:.....x..x..:.....x........:..............:.....:.....:..:.........---......:. 115M3D8M 101/123 82.1% 123/94230402 0.0% 3/123 2.4% 28184415 NA +7422 chr4 + 190214555 55425320 55425319 55425583 264 ACAGTATCAAGGTATAGGAATTTTA-CTGTATTTGACTTTTTTTCTCTCTCTTCCAGTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATTTTCTGCACTATTTATAAGCCCTGATTCTGGTTTTTAACAAGCTGTTTGTTCATCTATATTTA--GTTTAAAATAGGTAGTAT--------TATCT--------TTCTGTACAT-AGTGTAC---ATTACAACTAAA-----AGTGATGGAAAAATACTGTA--TTTTGTAGCACTGATTTTGTGAGTTTGACCCATT chr4 - 94230402 27241005 27241004 27241290 66989113 66989112 66989398 286 ACATTATAAAGATAAATTTATTTAATCCATCTTTGGTTTGTTCTTCCT---TTTCAGTGACAATCATAGGAGGCATCGTCTTCTTAGCTTTTGCATTTTCTGCACTATTTATAAGTCCAGACTCTGGTTTTTAAATA-----TTTTTCATCGCTGCGAAAGGACAAGGATGGGAAGCATCTAGCAGCTATCCTTGTGTGGTTTTGTATATAAATGTACAGAATTATAGTTAAACAAGCACCGAAGATGAGACACTGAACTTTTTATAGCAAATGATTGGTGGGATTGACACGTT ...x...x...:..x.xxx....x.-.::.x....::..x..:.::..---..:.........................:..:..:..x..........................:..x..:............xx.-----..x......xx.::xx.--.x:x.::..:..x..:..--------....:--------..:....:..-.:.....---....:.::....-----.x:..x.:x:.:.:....x.--....:.....xxx:x..x...:.x.....x.:.. 25M1I22M3D86M5D17M2I18M8I5M8I10M1I7M3I12M5I20M2I34M 187/256 73.0% 286/94230402 0.0% 38/256 14.8% 28184315 NA +42015 chr4 + 190214555 55434098 55434097 55435603 1506 ATGACACTGACACCCACATGCTGTTAAAAAGGTACTAAGGTTTCAAAACTG-------CTACGGAAACCGGACAATG-ACTTCAAGATGGTGA--GTTATCACCTGAATTAAAATCAAGGCACTATGGGGTTTTTTCCC----CTCAAATAACCCTGAATCATTTCTGACTAAAAGAAGCATTGAAATTGTGAAGGATAATAAAAAAGATTTCAACAAATCCCAA-AAGTTAAAATTCCCATGATTGAGAA---TGTTAAAAAGTGCCTAAGA------------------TGTTTTGTGTGCAAATTTTACCTCTATAACTGAAACATTCTTGAAA----------TTACTTTCAGGCTTGTTGAAAACCATTTACGCAAATATTTCCAACTATGAACTATAACAAAATAT-------GCAATCAAAACTCCCAGCCACCTAAAATAAAGCAGTGCAAATCC--------------TATTTTCAAACATAATTGAAAAATAATGAAATGAGGGATATTTCTGAATAACTTGAA-------AATCCTGTTGTAT------------------------CAATAATTTAACCTGAAAAAAAAAATCCATTCCCAGCAGCACATCATACCTCACTGAACAAACTGTGACATCACAGCCAAAGTATGAACAAAAAAACTTGTGCCCCGG--AAAAGTGAACAGAACACTACTG--TGTTGTAAACAAAAGGAAAAACAGGATGGA----TCAGTTTGCACATGGTGTCAGAATTTCAGGAAAGGTGCTCACACCTGTAAGGAAGAGATAACGCTTTCATGCAGCATACAAAATGTTTTGCTTTCTCTCCTTTTATCTAGACATATACATATT--TTTACATCATCTGTACA-TAGAGAATTTGAACCCACACAACATTCTGAAAGTAATTACTGTTCCATCATTATCTGAAAAGGGAGAGGGGTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGT-------AAGCAAACCCCTGACATGGCAGTGGTATGTCCTCTGTAACACTTGATAAGAGGCACAGAACCACTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCAT---AGCTGAGCTTCTTAATATTTGGCAATATATTCTTTTTCCATCAAAAAATATCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACTAATTCCAGGAACTAG----AACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTCAGGTCATCTGAGTAACTCTTAATGGGCCATCCCCTTCC---TCCCTTGATGTCAAGAGAGGAAGCACGTGT-GCTACTGTGGTTGAACCTTGGAAGGGTCGGGCAAGCTGTCAGTCCTGTGCCGGCTGAGTTGCTGCTGTTGCTGAGACTGATGTTGCTGGTGATGTGACTGAGGGAAGGTGCTCTGTTGTAGAGGAAATGCAGCAGAGAGAATGAGTTGAGTTGAGGGATTCCCATGGAGCAACCTAGAAGTCTAAAAAAC chr4 - 94230402 27250403 27250402 27251926 66978477 66978476 66980000 1524 ATGAAGTAGATACACGAGTTTGGCTGACAATGCACTAAGACTTCAAAATCGAGAATGGTTACAGATTCGAGACACCGTACGTCAAGATGTTCAACGTTATCACCTGAATTAAAATCAAGGCACTATGGGTTTTTCTGTCGCTGTTAAAATGACCCTGAATTAGTTCTGACTAAAGAAAG-ATCTAATTTTTGAATGAGAATAAAAA-GATTCCAACATATTTTAACAAGTTACAATTCTCACCACAGAGAAAGTGGTTAAAAAGTGCCCAAAAGGTTATTAAATGTAAATATATTTCTTGTGCAAATT--ACTCCTATAACTGAAACATTCTTGAAAATTACCGTCTTTTTTTTTTTTTTTCTTTTAAACATTTTACATAAATATTTCCAACTATGAACTATATCAAAAGATAGCTTTGGGGAATAAAATTCCAAACCATCCGCAAGGAAGCAGTGCAAATTCCTATTATTTTTTTTTTTTCTCAAATAAAATGAATTAGGTATGAAACGATGGATGATACCCATGAACCTGAACACCCTGAACCCTGATGCATGATCACCAGTTCAAACGGCTTCGTCAATAATTTAACCTCGAGAAGTCAA------CTGACCAACACACCATACCTCACCGAACAGACTGGGACATCACAGACAAAGCACAAACGGGAGA-CTTGTGCCCACACTGAGGGTGAAAGTAACGATGCAGCATGTTGTAAACAAAGGGGCAGAACAGAGGAAAACATCAGTCTGAGTATGGCGTGAAAATCTGCGGAAACATATTCAAACCTACAAATAACAGGTTACA-TTTCATGCATCATATAAAATATTTTGCTCTTTCTCCTTTTATGCAGACATATACACAATATTTTACAGCATCTGTACAACAGAGAACTGGATTTCCCACAACATTTTCAAAATATTTACTGTCCCATAATCATCTGAAAAAA--------TTAG-----------------ATGTTTGTCGGGCTATATTCCTGGCATTTTTTTTCTGCTAAATCAAACAATTGCTCTG---------TGTCCATTTTAGTACTTTA-AAAATGTACAGAACTGATAAAAAATACCAATATTTTCAGCATCCCTCTCATTTCAGTCACATTTTTTGATTTCACCTGGACAAATTAACACATGGCAGCAAACCCTTT---------AGAGCA--CAGAAACCGGGACAACGATCAAAGTTGGCCACGTCCCTGCCATCACCTGGTG---------------------------------------GTTTTCCTT---AACAGATTCCAGAAGTTAGCTGTAGGTCTCAATACCGCGGCATTAGAAA------GGCTTTGTACTGCTACCTCTGCAACTTCAGTGCAAGTGGTTATGGAGCAGCCCCCTCCCGGTAGCTGACTTCCCAGAGAGGCAGAGCCCCCAGCTACTGTGGCTGAGCTTTGGAAGGATCCGTCATCTTGTCAGTTCTGTGCCGTGAGAgctgctgctgctgc---ggctggtgctgctgGTGGTGGGACTGAGTAAAAGTGCTTTGCTGTAGTGGGAAAGCAGCAGAGAGGATAAGCTGAGCTGACTGATTCCCGTGAAGTAACCTGGATGTCTAAAACAC ....x::x..:..x.:x:.x:x.:.:.x..x.:......::.......::.-------:...:..xx.x:....x:.-..x........x.x.--..................................x....:.x:.----:.x....:.........:.x...........::...-..:x..x..x....x..x........-....:.....x..:::..-......x.....:..:x.:x.....---x.............:..:.------------------.:...:x..........--..::.......................----------..x:...:xxx:..x..xx....xx.....::........................x.....x..-------.x:.x:....:...x.:...:.::x..x:.............:.--------------.x..:.....:.x...x:.xx.:xx......:..x....:x.x.:x.xx...:....-------..:....x..:..------------------------..............x:.:..:xx..------.:x.x..:....:..........:.....:....x..........x.....:.::...:::.:.-.........xx:--:.::.....x:x...:x.:.x.--.............:..:x.:.xx:..x.:.----.....:..x::....:..x.:...:.xx.....x:.::...x....::..:x..x..:.x..:-.........x....:.....:.......:.:...........x:...........:.x.--......x..........-:......:.x..x::.x.........:.x...:..x.......:....x..:.........::--------..:.-----------------.x..:.:::..:..:.x...x......:x:.x.-------..x.....xx:..x:x..---------.....x:.x..::....x.-..:.x.:.......::x.....:x...:..:..:x.:..:::.::...x...:.xxxx.x:.:x...x..---.x...::.xxx....:.:x.....::.x.::....---------.:.::.--...:x...x::.xx..x:...:.::....:.:.:....::x.......xx..---------------------------------------:.....::.---...x:.......:.::...----.:xx........:..:x.x:xx....------.:x:..x:x..x..x:.::::x:x.x..x.x.:..x.xx.x....:x..x....:...---.xx..x:x.x:.x.......x..x:.x:x:-..........:...:.:........:..x.x..xx:.......:........xxx...:........:...---.:...:..:........:..x.......x:..:.....:..:.....x..:..x...........:..:..:....:...xx.......:..:..:.....:..x........x.. 51M7I19M1I15M2I44M4I36M1D26M1D18M1I25M3I19M18I17M2D27M10I65M7I44M14I57M7I13M24I25M6D64M1D12M2I22M2I30M4I63M1D59M2I17M1I63M8D4M17D33M7I18M9D19M1D70M3I35M9D6M2D52M39D9M3D19M4I26M6D58M3I30M1I71M3D116M 988/1397 70.7% 1524/94230402 0.0% 236/1397 16.9% 28183695 NA +16936 chr4 + 190214555 55438277 55438276 55438552 276 ATTACCTGTAAAAATTGTTGCGGTGGCTGGGTCAGCTGAGCCTGAGATGGTTGCTGAACTGAAGTGAGCTGCTGCTCCTG-----------------------------GGAGCT-CTGCTGCTGCTGCTGCTGCGTTACTGACAATGTCTGTGACTGTTGCTGTTGTGTAGCAAAAGTAGGATATGCAGTCACCACCTGGCCCATAAGCATAGTACTAGGTACCATGACTGCCCCACAAGCTACAGGAGCAGTCACTAATTTGGTCACAAGTTGTTGACCTTGAGAAAATCTGTTAGAAGAAAGA chr4 - 94230402 27253995 27253994 27254300 66976103 66976102 66976408 306 ATTACCTGTAGGAACTGTTGCGGGTGCTGGGTCAGCTGTGGCTGAGCTGGTTGTTGAACTGCAGTGAgctgctgctgctgctgctgctggtcttgctgactttgctgctgctgctgctgctgctgctgttgctgTGTTACTGGCAAAGTCTGTGGCTGCTGCTGTTGGGCAGCAAAAGTGGGATAAGCTGTCACCACCTGTCCCATAAACATAGTACTTGGTACCATTACCGCTCCACACGCTACTGGGGCTGTGACAAGTTTTGTTACAAGCTGCTGACCTTGAGAAAATCTGTCAATAGAAAAA ..........::..:........xx.............x.x.....x......:.......x..............x...-----------------------------.xx...-............:.....:.......:...x.......:...:........x.:.........:.....x..x...........x.......:.........x........x..:..:.....x.....x..:..x..x..x.:...x..:.....:..:...................:.:x.....:. 80M29I6M1I190M 231/276 83.7% 306/94230402 0.0% 30/276 10.9% 28184282 NA +12569 chr4 + 190214555 55442422 55442421 55442678 257 TGACAACT-ACCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTGCAGCA---CTCTGGGTGCTGTTTTGTGGCATACTAGATGGAATCTGGACCATGCTTCCGGCTGCAGGCTGAGAAATCACCATAGTGTTATACAGTGGGGCTGTAAGAGTGCTCTGTGTCTGACTGGGTAGAGATGTTTGCTGACTGTGCCCACTCAGTACATTTTGTTGACTCTGTTAAAAATAAAGAG-ATTTTATAGACAGATTAACTGAAAATA chr4 - 94230402 27254576 27254575 27254837 66975566 66975565 66975827 262 TGAAAACTTACCTGATTTGTCTATCTTGTGTAAAAGTAGTTACTGCAGCAGCATTCTGGTTATTGTTCTGTGGTAAGCTAGAAGGAACCTGGACCACATTTCCGGCTGTTGGCTGAGAAATCACCATAGTGTTATACAAAGGTGTTGAGACTGTGTTCTGGGACTGACCGGCAAGAGAAGATTGTTGACCGTGTCCACTAAGTACATTTTGCTGATTATGCTGTAAAGGAAGAATATGTAATGAATCAGTCACTTGAAAATA ...x....-....x..:..:..:..:..x..:..x...............---:.....x.::....:.....:.x:.....x....:........:::.........:x............................:x..x.:..x:.xx...:....x.x.....:..xx.....x.x...:....:...:.....x...........:...:.x..:.:x...x:....:-..x.x..::.:x::.:.x:........ 8M1I41M3I181M1I27M 193/257 75.1% 262/94230402 0.0% 5/257 1.9% 28187846 NA +12309 chr4 + 190214555 55443679 55443678 55443935 257 AACATTACCTGAGTTGATGTACTCTGTAAAGTCTGTTGTTGTATCATGTGCTGAGTTGTGCCAATGTGTCCAGTATTCATTCCACTTTGAATCTGGTTAGTAGGAACAACTTGGCCTTGCATATTTATAGGTGCAAGTTGCTGGATATTAGATGAATTTCCAGAAGAAAGTTGAACGGAACCAAAATTCAACCCAGGATTTGATTGTTGCAAAAACATCTTTAAAAATAAAGATTATGTTAAAATGAGCTTTGTAGA chr4 - 94230402 27256058 27256057 27256304 66974099 66974098 66974345 247 AATTTTACCTGTGATGCAGAGCTCTGCAAAGGCTGTTGCTGGATCATGTGTGG---TGTACTTGTATGTCCTGTGTTCATTCCACTTTGAGTCTGATTAGTCTGAACAACCTGACCTTGCATGTTTCCTGGTGCAAGTTGCTGAACACTTGAAGAATTTCCAGATGTAAGCTGCACAGAACTGAAGTTTAGTCCAGAAGTTGACTGCTGCAAGAACATCTTAAAAAA-------AATCCTAAAATTAGCTCTTAAGA ..:x.......x.x..xx.x:.....:....x......:..x........:x.---...:.:x:.:.....x..:...............:....:.....xx.......:..:........:...x:x..............:.:.:.x..x...........x.x...:..x..:....::..:..:.::....:.x....:..:.....:........x.....-------x..x:......x....:.xx... 53M3D171M7D23M 187/247 75.7% 247/94230402 0.0% 10/247 4.0% 28187621 NA +11820 chr4 + 190214555 55444569 55444568 55444800 232 TAATTTTCCTAGAAATCCAAAATGTGAATGGGATGCTTTGTTTGTATTCAAATATAACAATTACCTGCAGCCCCTGACCATGGACCATCTGAAGTTGTTCTTGAATTTTTCTTAGTTCTTCTTGTTGCCGATGAATATTTGCTTCTATCATGCGTGTCCGTTGTTCCAATTGGTCTTTCAGATGTTGCATGGCTCCTAATTGAGCTGAAAACTGAAA------CTGAAGTACCATGTA chr4 - 94230402 27258043 27258042 27258260 66972143 66972142 66972360 218 TAAATTCTCTACAGATC--AAATGTGTGTGAGTTACACTA------------------ACTCACCTGCAGTCCTTGACCGTGGACAATCTGAAGCTGTTCTTGAATTTTCCGCAACTCTTCCTGCTGCCGATGAATATTTGCCTCTATCATGCGTGTTCTTTGCTCTAGCTGGTCCTTTAGGTGCTGCATAGCTCCTAATTGAGCTGAAAACTGAAAGACAGGCTGTAGTGGCATGTA ...x..::...x.:...--.......x:..:.x.:.x:.:------------------.x.:........:..:.....:.....x........:..............:.x:.::.....:..:.................:..............:.x...:..:.::.....:..:..:..:.....:..........................------...x...:x...... 17M2D21M18D159M6I15M 170/212 80.2% 218/94230402 0.0% 26/212 12.3% 28186526 NA +4200 chr4 + 190214555 55445655 55445654 55445744 90 ATCATGGCTCTCTACAGCCTTAACTTTCTGGGTTCAAGAGCTCCTCCCATCTCAGCCTCCCCAGTGGCTGGGACTACAGGCATGCACCAC chr4 - 94230402 18197118 18197117 18197202 76033201 76033200 76033285 85 ATCATG---TTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ......---:.........:x..x:.............x...:.x.xx:x........::.x...:.....:......--.:........ 6M3D69M2D10M 67/85 78.8% 85/94230402 0.0% 5/85 5.9% 37248537 NA +10627 chr4 + 190214555 55449372 55449371 55450280 909 AAGAATATCCACTAAAGAGCTTACCTGACTACTAAATGATGACCTTCTTTGCACCATCTTCTCATGAGCTGGTAAATGCTGCCTGGGTGGAGTGCTCGTATCCGTCGGGATCTTGGTTGGTGTTGCTGAAGTCAACAAAATCAGAAGAGCATTAGTACTTTATAAAATATAGTTTTTAAAGATTAATCTCAA------AATG---TATTTCAGTTAATAAAAATGGCTTTTGAATTATTTTTCCAAACCATTCAATGAAAGTGAAGTCCATGACAGATGATTCAATGTAGTTACTTCTATCTTTTTATGA---GCA----CAAAGAAAATA-----------GTTGAAATAGGAAAATTTTAAATACAAAAAGTCACTAATTTAATGACAATTATACAAGTCTTCAAAAAGAGAAGACAATAAAAAACTTTCAAAAAGCAAACCTAAGAACACTTACTGGCCCTACAGTAAAAAAACACAATAAATAGTTGCCTTTCTTTTTGAGGGATGATTAAAAACATCACCATCACCATTACCACCTACACA-TTTTAATAGGCTACTTGAAGAACTTAATTCTTTGCTGAAAGTGGGCAATGTCCCTTTAACTCACTGGAAAGGTTACTACATTTCAGAAATGTAAAAACTTATAATTTTAAAGAAGCGTTTGATGAGAAATGCTGATATAAGTAACTAAAAGTTTAGTTAGTTACTTTAAAGGAAGTCTGCTTTGAAGCAAGGGTACTCACAGGAAGGGTCTGAGACGGCCGTGTGAGATGATTTTCTTGAACTCCGAGAAGAGGCAGAAGGGGTTGGGCTGTGATCAAACCTTTCCAATGCTTCCTTGAGACTGACTGTGTTTATACGATTATCTGACCCAGAATCTTGGCTCTATGGAGACAGAGTAAAATAAATGTTTTCTTGT--GGTTCAGTTCAGAG chr4 - 94230402 27259671 27259670 27260379 66970024 66970023 66970732 709 AAAAATTTTCTTCAAAGCG-TTACCTGACTACTCAGAGATGATCTTCTTTGTGTAGACTTTTCATGAGCAGATAAGCTTTGTCTTGGGGGAGTGCTAGTGTCCACTGTCATTTTAGTTGGTGTCGCTGA------CAAAGTTG----------------TTACAAGAAAAGGATATTAAC-AGCAATCTCAATTCCGCAATGCAGTAATCAAATCACAGGAAACTATTCCTGAATTA-----------------AAAAAACTTAAGGCTTGGAC-------------TCTTTTTTTTTTTTTTTTTTTGCCTTGCATTTCCAAAAATAATGCAATCTGATGGACTGAAACAGGGCAGTGT--------AGGGGCTGCTACTGCAGT----------------TTTAAAAGCAGAAACCATTACACAAGGTCTGAAAATC--------------TTAGTGGCC---------------AGAATA--------------TCTCTGATCCATCATAAAGGACACTCTCATC------------TGCACACTTTTAATA----------AAATGATGATTAATTGCTAGAGATGGA---------TTTAATTAAGTAAAA--------------CAGAGA-----------------------AAGTCTTCACTAAGAA------------GGAACTTATATATTCAATAGTT-----------------------------GATGCTTACATGAATGATCTGATACTGCAGTATGTGAAGATTTTCTTGAACTCCTGGAGGAAGCAGAAGGTGTGGGGCTGGTATCAAACCTTTCCAGAGCTTCTTTGAGGCTCACCGTGTTTATGTGATTATCAGACCCAGAGTCTTGACTCTGAAGAGACACACAGAAAGAACAGCTATTTTATCAGATTCAGCACACAG ..:...x.:.x::....x.-.............x.:x.....:........:::x:x...:........x.:...::x:..:..x..x........x..:...:::.xx..:..:........:.....------....:.::----------------...:..:.x.x:.x.x....x-.x:........------....---..x.:x.:.:.xx::...:x::.::.......-----------------.x:...x.x...x.:xx...-------------.xx..x:..:.x.:.....x..x---...----....:.x...:-----------::.....:...:x.:.x.--------.:::.:::...x.x:.:.----------------..:....:x....:x..x..x.x..xx.:::....x.--------------...x.....---------------.x....--------------.:.:...xxx..x..x..::...::x:....------------.:....-........----------.:.xxx.:...xx.....::.::...:---------.....:.x.x.::..--------------....:.-----------------------...:x..::x.:....------------.x....x.x.xx..x:x.....-----------------------------.:.:..:...x...x.:.....x..x..x..:..x..x................x:..:..:........x..x......xx..............:x.....:.....:..x..:........::.......x........:.....:....:x:......x.xx:...x..xx.:.x.:..:.--.:.....:x..x.. 19M1D109M6D8M16D21M1D11M6I4M3I32M17D20M13D23M3I3M4I11M11I18M8D18M16D37M14D9M15D6M14D31M12D6M1I8M10D27M9D15M14D6M23D16M12D22M29D185M2I14M 466/679 68.6% 709/94230402 0.0% 260/679 38.3% 28189701 NA +5698 chr4 + 190214555 55453014 55453013 55453168 155 AGAAATTAAAAATAATTTTTTTTAATTATAAGAAACATACTTTGTCAGCAGCTGTCTCAGGAAGAGACTCTTCAATGCCAAGTTCTCGTCGTCTTTCAGCCCTAACTTCTGCATAACTACAAATGGAAAAAATAATCAAATTTTAGTGTCTGGTC chr4 - 94230402 27261104 27261103 27261240 66969163 66969162 66969299 137 AGAAGTGAAACAAAAGGTTTGTTACTCA-----------CTTTATCTGCTTTTATCTCTGGCAGAGACTCCTCAATACCAAGTTCTCGCCGCCTTTCTGCTCTGACTTCTGCATAACTA-------GAAGAACAAACCAAATATGGTGTTTAATC ....:.x...x.x..xx...x...x.:.-----------....:..x..xx:.:....x..x........:.....:...........:..:.....x..:..:...............-------:..:..:..x.x..x.x.:....:.::.. 28M11D80M7D29M 102/137 74.5% 137/94230402 0.0% 18/137 13.1% 28191910 NA +11442 chr4 + 190214555 55453673 55453672 55453902 230 TTACCTTACTACAGTGTGAGTACAAACAATAAACTCTGGCCTTGAATTCCACTGATGGTAAGTGATATAATAATGAGTCTGAAGCCAAATCCACTGTTGCCCCTTAGTCAGGAACCTATAATAACATGATTTGCCTTTCCCATATTGCATTACTAAAAGGAAAATAGAGAAATATTTTTTCTTTAATTCATATTATATAAAGATTGTTTTTTAACCAAAAGCTATCATTT chr4 - 94230402 27261420 27261419 27261644 66968759 66968758 66968983 225 TTACCTTACAACTGTGTGCGTACAGACAATAAACTCTGGCCTGGAATTCCACTGGTGGTACGTGATATAGTAATGTGTTTGCAGCCAAATCCATTGCTGTCCCTTTGTAAGGAATCTGTAATAACATGACTTCCCTTTCCCATATTGCATTACT----GTAAAAGTGAAGAATAAAGTTTACTGCCTTTCCAGTTTATAAATACTGCAATTATATAATAAGC-ATTATTT .........x..x.....x.....:.................x...........:.....x........:.....x..:..x...........:..:..:.....x..x.....:..:...........:..x.....................----.x....xx..::....xxx...x:.xxx..:x:.x.x......x.:..:xx..xx.:x.x....-..:.... 154M4D64M1D7M 176/225 78.2% 225/94230402 0.0% 5/225 2.2% 28192253 NA +14262 chr4 + 190214555 55455890 55455889 55456320 431 TACTTACAGTGCTCATGACATTTTGCCAAATTTTCTAGGTCATCCACATGATAGTAATCATAGCCTGATGTTCCCAGAACTTCAAATGGCAAATACCCTATTATGGGTGGTGCCCTAAATTACACAGAAA----ACAATCATTATTATAAGTTTTTCCATAATAAGAAATATTTCAACTAGAAATAAACTTTGGGGGGGGGGCTTTATTTT---------------------------TCAAAAAATGGGAACAGGTTTCAAAGTCCTAATTTAAAAAAAAGT----------TTGCCCTTGATCCATTAATTTCAAGAATTATATAACATG--------------ACTATTACCTTTTCATGGAATTTAAAAATGGAATTACCTGTGATCTAGAAACAGAAACTTCCATTCTAAACTATGTCTAGATGTAAACTCTTCATTGGGTTCTTCAACAGTGCACATTTCCTACAAATAAATAATTAAAA chr4 - 94230402 27262162 27262161 27262619 66967784 66967783 66968241 458 TACTCACAATGCTCATGACATTTTGCCAGATTATCTAGATCATCCACATGATAATAATCATAGCCTGATGTTCCCAAAACTTCAAATGGAAGATAGCCTATTATTGGAGGTGCCCTAA--TAAATAGAAAAATTACAGTCATTTTC-----TTTTGACAGGACAAAACAAAATC--attatatatttttttt----------ctttttttttttGCATTTGCATTTTTTATGTTTTTCTCAGaaaaaaaaaata------aaaaattaaaCTCAATATAAACTATGAGTATAATTAATACTGATCAGTGAACTCTACACATTACA-GCCATAGAAGTGATTCAGCTACTATTGCTGCTATATATAG--GAAGAACTGCAGCACCTGTGATCCAAGAATAGGAACTTCCATTCTAAGCTATGCCTAGATGTGAACTCTTCATTGGGTTCTTCAACAGTGCACATTTCCTGAAAAGTGAAAAAAAAAA ....:...:...................:...x.....:..............:......................:............x.:...x........x..x..........--..x.:.....----...:.....x.:-----....xx..x:.:..:.x.x.x.:--.:..x.x..xxx:...----------....x....---------------------------...:....x:::..:.------...:x::x..:.:..x.x...x.----------..:x:x:.....x:.x..:.::.x:x....:.-:x...:--------------......:.:x:.x:..:x.:--x..:..:x.x.x:..........:.::..:..:..............:.....:........:.....................................:x...xx:.x..xx.... 118M2D10M4I12M5D23M2D16M10D9M27I16M6D23M10I32M1D6M14I20M2D118M 302/403 74.9% 458/94230402 0.0% 83/403 20.6% 28193728 NA +8176 chr4 + 190214555 55458872 55458871 55459027 156 AAATAAAATTAAAA-ACATACCTTGATGAACTGAGGTGTAGCTAACCTGACAGTAGCTACAAAACAAACTCTATCTTCATAAGATGGCCTATGTGTGCGTTGTATAGTTCCTTCAAAACCATTGTGTGCTGAAGAGGATACTAAAACAATAGGGAAA chr4 - 94230402 27263883 27263882 27264039 66966364 66966363 66966520 157 AAATGATATGAAAGTGCATACCTTGATAAATTGAGGTGTAGCTAATCTAACTGTGGCTATAAAGCAAACTTTGTCTTCATATGAAGGCCGGTGCGACCGCTGAATAGTTCCTTCAAAACCGTTGTGTGCCGAATTGGGAACTGAGGGAAGACAGAGA ....:.x..x...:-:...........:..:..............:..:..x..:....:...:......:.:........x..x....x:..:.xx..:..x.................:........:...xx..:x...:.::x..x.x:..:. 14M1I142M 118/156 75.6% 157/94230402 0.0% 1/156 0.6% 28194989 NA +9732 chr4 + 190214555 55459142 55459141 55459358 217 ACTCACCACTGTTTAAAGATTTGAAATTTCCTATAAATTTTACATATTCATAGGTAGATGGCTCCTTTGGGTCTATTGTTCCTCGCAGCATGTGACAACAGAATTCTAACTGATTTTTTGCTGAAATAA----AAGAGATTTTAAAAATCACATATTTCTGATATAAAACAATGATTGATATACCACATAAAGTAAGATCATAAAAGTTGTGTAAGTTTAC chr4 - 94230402 27265769 27265768 27265977 66964426 66964425 66964634 209 ACTTACCATTATTCAAACACTTGAAATTGCCTATAAATTTTACATATTCATACGTAGGTTGCTCTTTTGGGTCTATTGTTCCTCGCAGCATATGGCAACAGAATTCTAGCTGATTTTTTGCTGAGAAAAGAACAAACAAATTAAAAGATTGCGTGGTT----GATGAAACAG--------ACAACAAGAAATGGAAAGCAGGAATAATTAAGTAACTTTAC ...:....:.:..:...x.:........x.......................x....:.x....:..........................:..:.............:...............:.x..----..:x:.x..x...:..::.:.:x..----x..:.....:--------.:.x..x:x..x.x..:::x:x..x.:..:x....x..... 129M4I25M4D10M8D41M 157/205 76.6% 209/94230402 0.0% 16/205 7.8% 28193373 NA +11259 chr4 + 190214555 55463673 55463672 55463818 146 GCTACTACTTACATTTTAAATATTCTGGGGTTAATGAATCACTTTCCAGCAGATGAGTAGAGAGTATTTTATAAACCTCTGAATGTTCCCCTTCTGGGATAAAATTAAATATACTTTGATCCACAAGATCAGACTGAAAAGAAAAT chr4 - 94230402 27266430 27266429 27266575 66963828 66963827 66963973 146 GCAACTACTTACATTTTAAGTATTCCGGTGTCAATGAATCGCTTTCCAGCAGATGAGAAGACAGAATTTTATAAATTTCTGAATGTTCCCCCTCTGGGATAAAATTAAATACACTCTGATCCACAAGATCAGACTGAAAGAAAAAT ..x................:.....:..x..:........:................x...x..x..........::..............:...................:...:.......................::..... 146M 130/146 89.0% 146/94230402 0.0% 0/146 0.0% 28197243 NA +10737 chr4 + 190214555 55470709 55470708 55470844 136 ATACTTACTGGTAAATGTTCAAGTAATGAAGTTACACTCTCAGACACATATATTATGCTTCCATCTGTCATGATTGCTAAAAAAAAACCATCAAGAGCCTGAAATTAAACATAATGATATGTTAAATGAAAAGAAA chr4 - 94230402 27267569 27267568 27267704 66962699 66962698 66962834 136 ATACTTACTGGCAAATGTTCAAGTAAAGGAGTTACACTTTCAGACACATATATTATATTTCCATCTGTCATAATTGCTAAAAAAAAACCATCAAGAGCCTGAAATTAAACATAATAGGCAGTTAAATAAAAAGAAA ...........:..............x.:.........:.................::.............:...........................................::xxx.......:........ 136M 123/136 90.4% 136/94230402 0.0% 0/136 0.0% 28203140 NA +8598 chr4 + 190214555 55475957 55475956 55476060 104 ACATACCTCTAACATTAATTGTGTAAACTCTTCATTACTAAGGAATGTAGGTTTCCAGTCCTGTCGAATTTCACTAGCATCTGACTGTGCAGTGATTTCTGTAA chr4 - 94230402 27268586 27268585 27268689 66961714 66961713 66961817 104 ACATACCTCTAACATTAACTGCGTGAACTCTTCATTACTAAGGAATGTTGGTTTCCAGTCCTGTCGAATCTCACTGGCATCTGACTGTGCAGTAATTTCTACAA ..................:..:..:.......................x....................:.....:.................:......::.. 104M 95/104 91.3% 104/94230402 0.0% 0/104 0.0% 28207371 NA +12236 chr4 + 190214555 55478762 55478761 55478982 221 ATTCTAACTA-----ATGCTTTGAGAGTCTGTTCCATTTTACAGAGTTAAAAATTTACCTTTATGTTTTCGTAAAAAATCAATGCTTTTCTGCAGAACAGTAGATTTGTCCATCTTTCTAGCATTACCAGGAAGCATGGATCCCAGTTCTTTAATGAGAACATTAAATTGATCTCTACGTTTCTTTTCAGATTTGTTTCTAGATACTCTG----ATGAAATGAAAAATAT chr4 - 94230402 27270803 27270802 27271025 66959378 66959377 66959600 223 ATCATAACTACTTTCATACCTTACAAATGTATTTTTTCTT-----GTTACAA--TTACCTTTGTGCTTCCGTAAAAAGTCAATGCTCTTCTGCAGTACAGTGGATTTATCCATCTTCCGAGCATTACCTGGAAGCATGGAACCCAGCTCTTTGATAAGAACATTAAACTGATCTCGACGTTTCTTTTCAGACTTGTTTCTAGACACTCTGACAAATAAAACAGAAAATGT ..:x......-----..:.:..:x:.:.x.:..::x.:..-----....x..--........:..:..:........:........:........x.....:.....:........:.x.........x...........x.....:.....:..:...........:.......x...............:...........:......----..:...:::.....:. 10M5I25M5D7M2D156M4I16M 175/214 81.8% 223/94230402 0.0% 16/214 7.5% 28207959 NA +5520 chr4 + 190214555 55479633 55479632 55479734 102 AAACTACCTTTTCGCTTTGTCCTTGTCATCTTCTTCCACCAACCCATCAAAAATACTACTGTCATCTCTAAAAGA---AAGCGGATAGAGAAAGTAAGAGCAGAC chr4 - 94230402 27271352 27271351 27271456 66958947 66958946 66959051 105 AAATTACCTCTTTGCTTTATCTTTGTCATCTTCTTCCACCAGACCATCAAAAATGCTTCCATCATTTCTGAAAGAAACAAAAGTAATGAGAAAGAAAAAAAAAAC ...:.....:..:.....:..:...................:x...........:..x.::....:...:.....---..:x.x.xx.......x..:.:x.:.. 75M3I27M 79/102 77.5% 105/94230402 0.0% 3/102 2.9% 28208281 NA +3501 chr4 + 190214555 55480340 55480339 55480422 83 CTGCAGCCTCAACCTCCTGGGTTCAAGAAGTCCTCTTGCCTCAGCCTGCTGAGTAGCTGGGACCACAGGTACATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:.....:x..x..:...........x:x.:.x.xx.x........x:::.........:..:...x..:..--....::.. 73M2D8M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 37283214 NA +7115 chr4 + 190214555 55482648 55482647 55482851 204 ATTCCTTCTATCAATTTCATATAGACCATTATTCTAATAGTGCATTT----------TAAAATAATTA-------TATATAAC----------TTAAAAT---AAGTCTTCAAAAACATACCTGTCAACAATCGAGCTCATTTTACTACAGCTTACGGTAAACAACATAACATACTACGTTTTCGTCTTGTAGTAGACATTTGTACTTCTCCTTAGGTGAAAAGAAAAATAAAT chr4 - 94230402 27272963 27272962 27273194 66957209 66957208 66957440 232 ACCCCTCTTATTTTTTTTGCATAAATTATTGTTCT--CTGTGTATTAACTGTAAAGATAAAATCAGTAATGGAAATATTTAACAGTAAGTTCCTCAAAACTCACAGTTTCTATAAACATACCTGTCTGCAATGGAGCTCATTTTATGGGTGCTTATGGTAAAAAACATAACATAGCACACTTTAGTCTTGTGGTAGACATTTGTACGTTTGCCTGTAGGAAAAGAAAAAACAAT .::...::...:xx...:::...:.::...:....--:x...:...x----------......x.x..-------...x....----------.:....:---x...:.::.x.............x:....x............:x:xx.....:......x...........x:..::...x.......:..............x.:.x.:.:x:x...........xx... 35M2D10M10I11M7I8M10I7M3I131M 148/202 73.3% 232/94230402 0.0% 32/202 15.8% 28209685 NA +3746 chr4 + 190214555 55519127 55519126 55519208 82 CTACCGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCTGGAGCAGCTAGAACTACAGGCACAAACCACTAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGT ....x...:x..:..:.....:.......x.:.x.xx.x........:.x:..:....:........x.::.--......:. 72M2D8M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% 37322001 NA +6467 chr4 + 190214555 55545940 55545939 55546311 372 GCCGCGCGCTGCCTAGGAACGGAACCCCGGAACCACCACCACTAACGGAACCAGCCCGCGGCCGGCAACGGCGGCCGTTCGGACTGCGGACTGCGGCACGCGGGCCGGGCGCCGGGAGGGCGGGGGTTCCCCGGAGGAGCTGGCCGCCCCGGCGCCCCATTGGGCGCTGCTCCAAACGTGCCCG--AGTGGTGACAGGAATAAAGTGGGTCACAAGGCCTAGCGGGTCCCCAGCGAAAGCTCTCTCGGCACCCGGTCCCCGTCTTTCCCCGCCTCCCAGCTGCTGGAATCGGCCGCAGCTCCGGGCGCCCTCAAGCCGCCCGGCCCCGCCGTGCACCCCACTCCCGCCCCTGCCCCGCAGGTAACCCCAGCTGC chr4 - 94230402 27301233 27301232 27301498 66928905 66928904 66929170 266 gccgcccgccgccccgcagcg---ccccgggccc------------ggacgcggcctgcagccgcccgccgcg----------ctgccgggagcggc---cgggccgggcgacggg-------------------------------ccaggcg--------ggcAGCGCTCCAAACGTGCCCGGGAGTTGTGACAGGAGCAAAGTGGGTCACCGGGCCCTACGGGTGCCCCGCGAGCGCcc--------cccgg-ccccgccgccgcccgcgcccc----gctcaa---------------gggcgccc----gccgcccttccc------gcgccccgccgccgccccgg---cGCAGGGGGACCCGGCGGC .....x...:...:x.x.:..---......:x..------------...xx.:...:..:....x.x:.x...----------....x.:xx.....---...........x....-------------------------------..x....--------...:x:................--...x.........::............x:....:x:.....x...x....:x..:.--------.....-.....:.x::x.....x:...----...x:.---------------........----.......xx...------..:....:.:x.......x.---......x::x...:..x.. 21M3D10M12D27M10D14M3D16M31D7M8D22M2I56M8D5M1D21M4D6M15D8M4D12M6D20M3D19M 203/264 76.9% 266/94230402 0.0% 110/264 41.7% 28244707 NA +8217 chr4 + 190214555 55556573 55556572 55556720 148 TCACTGTTGGAGCTATCACTGTCATCATGAATAGAAGTGTTTCTAATTGAAGATACCATCATATCTACCATGTCTTTTCTGGGGTTTTCTTCCAAATCAGTCTGTATTGCTCCAACTTCTGCTAGCTTCCATTCAAGTTCTGTAATAA chr4 - 94230402 27305249 27305248 27305396 66925007 66925006 66925154 148 TCACTGCTTTTTGTATCCATGTTTTCATGAACAGAAATGTTTTGCATTGATAATGTCATCATATTTATAATGTCCTTCTTGGGGTTTTCCTCTAAGTCACTTTCAATTGCTCCAACTTCTGCTAGCTTCCACTCAAGCTCTGTAACAA ......:.xxxxx....xx...:x.......:....:.....:xx.....x:..::........:..:x.....:..::..........:..:..:...x.:.xx..........................:.....:.......:.. 148M 113/148 76.4% 148/94230402 0.0% 0/148 0.0% 28251324 NA +3746 chr4 + 190214555 55556909 55556908 55556982 74 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGCAATTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::..........x...x..x.x........::::........x..:....x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 37359783 NA +3018 chr4 + 190214555 55561555 55561554 55561603 49 TTCTGTCTCAAAAACAAACAAACAAACAAACAAAAAACAAAAACCGAAA chr4 - 94230402 71528704 71528703 71528752 22701651 22701650 22701699 49 TCTTACCTAAAAAACAAACAAACAAACAAAAAAAAAACCACAACAGAAA .::.::..x.....................x.......x.x...x.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% -15967149 -78263253 +10513 chr4 + 190214555 55562400 55562399 55562623 224 TTACCTTCCAGCTTGAGATTTATCCCTCCACATTCTATAATTCCAATGAATTTGGCTTCTATCTGACCATTTTTATACACAAAAATTGTTGGTAAACAATTGTCATGGTAGTGTTGAATACAGCTATTCACGATGGCTTTAACAAATTTAGTTTCTGGAAACTTTCTTGCTAGAAGACTAAGATGCTGGTTAACCAACAAACACATTGGGATGCTAAAAAGAGA chr4 - 94230402 27305686 27305685 27305909 66924494 66924493 66924717 224 TTACCTTCCACTTTAAGATACGCCCCGCCGCATTCAGCCACCCCGATGAACCGGGCTTTTATTTCACCAGATTTGTATACAAGTATAGTGGGCAAACACCTGTCGTGGTACCTCTGGATGCAGCTGTTCACAGCGGCTTTGACAAACTTGGCTTCTGGAAACTTCCTGGCTAAGTGGCTGAGGTGTTCATTGACCAGAAGGCACACGGGGATGCTAGGGAAGGA ..........x:..:....x:::...x..:.....x::x.::..:.....::x.....:...:.x....xx...:..:....:x..x..x..:.....x:....:.....x:x:..:..:.....:.....:::......:.....:..:.:............:..x....::x.:..:..:..:.x:..:....:x.::....:x.........:::.::.. 224M 153/224 68.3% 224/94230402 0.0% 0/224 0.0% 28256714 NA +7815 chr4 + 190214555 55569710 55569709 55569871 162 GTAATTACCTTGATCTGTATAGATGAATTATAACCCACACATCTTCTTCTGCATTTGTGACTTCATTCACATACTGATTTCCAGAAATTTCTCTTAATTCTCCAAATTTTTGTTTTTTCTTAAGAGCTTTCCATTCCTGTAACCGCTTCTTTCTAATTAAAA chr4 - 94230402 27306846 27306845 27307007 66923396 66923395 66923557 162 GTAATTACCTTGACCGATAAAGATGAATTATGACCCAAACATCCTCAGGAGCATTTGTAACTTCCTTAACGTACTGCTCTCCGCTGATCTCTCTCAGCTCCCCATACTTTTGCCTCCTCTGAAGGCATTTCCATTCTTGCAAGCGTTGCTGCCTGATCAGAA .............:.x:..x...........:.....x.....:..xxxx........:.....x..x..:.....x.:...:xx:..:.....:.::..:...x.:.....::.::...x...:xx.........:..:..x..:.x..x:..:..:.:.. 162M 116/162 71.6% 162/94230402 0.0% 0/162 0.0% 28262864 NA +3425 chr4 + 190214555 55572040 55572039 55572098 59 AACAACTTCCCTTCCTCCTCTCCTCTTCCACTTCTTCCTCCTTCTCATTTCTCTGTTAT chr4 - 94230402 36600608 36600607 36600666 57629737 57629736 57629795 59 AGCAAACTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTAT .:...x:...:..::.......:::....x:......:.....:........:.x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 18971432 NA +3485 chr4 + 190214555 55573857 55573856 55573912 56 TCCATTACTTTAGCTTATCACTAGTTTTTGTTTGTTTTTTGTTTGTTTTTTTTTTT chr4 - 94230402 15879293 15879292 15879348 78351055 78351054 78351110 56 TCCATTGCTTTAACCTTTAGTGGTTTTTTGTTTGTTTTTTGTTTGTTTTTTCTTTT ......:.....:.:.x.x::x:x...........................:.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 39694564 NA +6463 chr4 + 190214555 55580805 55580804 55580926 122 AAATGAATCACTGTACCTATATGTTTCAACAGCCTGCATATCTTCTTCATCAAATTCATCTTCAGCTTCCTTTAGCTGTGCAAGAGTCATCTTTTCAAATGGTTTCACTA-AAACAACATAAA chr4 - 94230402 27308108 27308107 27308230 66922173 66922172 66922295 123 AAATATCTCACTACACCTGTACATCTCAATAGCCTTCCTATCAGCCTCATCAAAGTCATCTTCAGCTTCTTTTAATTCTTCAAGACTCATTCTCTCATATGGTTTCACTAGAAACAAAACAAA ....:xx.....::....:..::.:....:.....x.x....xx.:........x..............:....::.x.x.....x....::.:...x............-......x.:... 110M1I12M 94/122 77.0% 123/94230402 0.0% 1/122 0.8% 28272697 NA +8705 chr4 + 190214555 55582122 55582121 55582239 118 GCTTCTTTCTGTAAACGTAAAACCATTTCTTCAATTTCATCTTTTGACTCTTCTTTAGGAGGAAGAATGCCGAAATCTCTTAAAATGTCATTCCATTCTGTATCTTCATTGGGATCCT chr4 - 94230402 27308597 27308596 27308714 66921689 66921688 66921806 118 GCTTCTTTCTGCAAGCGTAAAACCATCTCTTCAATTTCATCTTTTGGCTCTTCTTTTGGAGGAAGAATCCCAAATTTTCTTAGTACGTCATTCCATTCGGTATCTTCATTTGGGTCCT ...........:..:...........:...................:.........x...........x..:..x.:.....:x.:............x...........x..:.... 118M 103/118 87.3% 118/94230402 0.0% 0/118 0.0% 28273525 NA +3281 chr4 + 190214555 55584223 55584222 55584267 45 AAATGTTACTAGTTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTT chr4 - 94230402 83544329 83544328 83544373 10686030 10686029 10686074 45 AAATAAAACTGTTTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTT ....:xx...:x................................. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% -27960106 -66270296 +3095 chr4 + 190214555 55584235 55584234 55584270 36 TTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTGTT chr4 - 94230402 14023440 14023439 14023475 80206928 80206927 80206963 36 TCTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTGCT .:................................:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 41560795 NA +3023 chr4 + 190214555 55595547 55595546 55595642 96 TATATATATATATATATACACACACACACACACACACATGCACACAGACAGAAGAAATATATATATGTGTGTGTGTGTATATATATATATATATAT chr4 - 94230402 87985346 87985345 87985441 6244962 6244961 6245057 96 TGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT .:.:.:.........x..:......x.x:.....x:Xx.x:x..xx:.xx:::..x:.:.......:.x...:.:.:......::.:.x..:..:. 96M 59/95 62.1% 96/94230402 0.0% 0/96 0.0% -32389799 -61840603 +3397 chr4 + 190214555 55595549 55595548 55595652 104 TATATATATATATATACACACACACACACACACACATGCACACAGACAGAAGAAATATATATATGTGTGTGTGTGTATATATATATATATATATATTTTTTTTT chr4 - 94230402 87985346 87985345 87985449 6244954 6244953 6245057 104 TGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTT .:.:.:.........x:.:......x.x:.....x:Xx:x:x...xx..x..::.::.:.....:.:.x...:.:........::.:.x..:..:.:::.x:.. 104M 63/103 61.2% 104/94230402 0.0% 0/104 0.0% -32389797 -61840605 +3065 chr4 + 190214555 55595605 55595604 55595687 83 ATATATATGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGT chr4 - 94230402 8681930 8681929 8682006 85548397 85548396 85548473 77 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA---AGAGCTT---TTGATTGTCCAGAT .....x..:.:.:.:...:.::.:.:.:...:.....xx.:...............---....::.---.:x:...:....:. 56M3D7M3D14M 55/77 71.4% 77/94230402 0.0% 6/77 7.8% 46913675 NA +8067 chr4 + 190214555 55605242 55605241 55605379 138 TGGCAAAGCCAGCATGCA--GTTTG-TATTACATACGTCCACTCTGAATCTCTTCATTCTTCTCTCATGCAGGTGAGGAACGAGCTGCAGCAACGGATGCACAACTGACGACTGAGAGGACATGAACAC--ACACGTGAATAA chr4 - 94230402 27314513 27314512 27314655 66915748 66915747 66915890 143 TGAGAATGCAAGCATGCACAGTTTAAGATTACATACGTCCACTTTGTATCTCTTCAGTCTTCTCTCATTAAGCTGGGGAACGAGTTGCAGCAAAGGATGCAGGACAGACGACTGAGAGGACATGAACACAGACACATGAGCAA ..:x..x..x........--....:-x................:..x.........x...........xx..x..:........:........x.......x:..x.......................--....:...::.. 18M2I5M1I103M2I12M 117/138 84.8% 143/94230402 0.0% 5/138 3.6% 28290729 NA +6526 chr4 + 190214555 55607253 55607252 55607475 223 TTAAACAAATATTAGTGATTACTAAGAAGTAGTTCTACAACTTACCACAACATTTGACTTGCCCAACTTCTGTGTCTTCGAATAATGAAATAAGAACTGTTTAAAAAAAGCAGTAA------------GTTTTACTATAAAA-----------ATTAATGGTTCCCTTATTATT----------TTATAAGGTATAGATGTATGAAAATCATCTTACCCTTTTAGTATTATCTTTTTCATCTTGTTCCTATTGAAA chr4 - 94230402 27316120 27316119 27316367 66914036 66914035 66914283 248 TTAAAGGCACATGTGTACTCACATGGAGGT-GCTAGGCCACTTACCCTGACGTCTGAGTTTCCTGAGTCATGAGTCTTAGAATAATGAAATAAGAACTGTTCaaaaaaaaaaaaaaattaaaaGTGGGGTTTTACTACAAAATAGGACAAAAGAGTTAGGATTTCCTTATTAATATTAGACTGATCGTAAGGCATACATA---GAA----ATCTTACCCTTTTCATGTTGTCTTTTTCATCTGAACCCTGTGGGAA .....x:x.:..xx..:x.:..xx:..:..-.:.xx:.x.......x::..:.:...x..x..::.x.:x..x.....x......................:.......:x.:x..------------.........:....-----------.x.x.x.:..:........x.----------.::.....:...x..:---...----.............x:.:..:............x:x:...:.x.:.. 30M1D85M12I14M11I21M10I16M3D3M4D46M 155/215 72.1% 248/94230402 0.0% 41/215 19.1% 28291133 NA +3966 chr4 + 190214555 55609116 55609115 55609201 86 TTACCTGAGGCTTTGGTAGCATTCCCATAATCATAAAGCAAAGCTCCTCCAGTGCGTTGGATGCCTAACAGAAATGAGAAGATATG chr4 - 94230402 27317277 27317276 27317359 66913044 66913043 66913126 83 TTACCTGTGGCTTCTGGAGAAACCCCATGGCCAAAAAACAAAGTTCTTCCAGTGTGCTGGACACCTAATGAAA---AGAAAACATG .......x.....:x.x..x.x:.....:::..x...:.....:..:.......:.:....::.....:::..---....:.:... 73M3D10M 60/83 72.3% 83/94230402 0.0% 3/83 3.6% 28291839 NA +3897 chr4 + 190214555 55616313 55616312 55616393 81 ACAAAATATCTTCAATTGGAATTACCTGAGGCTGAGAATCAATGGACAGAAAAGACGAACAAGTATCATCTATCTGTAGAA chr4 - 94230402 27317410 27317409 27317490 66912913 66912912 66912993 81 ATAAAGCAACCTTCATTTGTCTCACCTGAGGCTGAGAATCTGTGGACATGTAGGCAGAACAGGCATCGTCTATCTGTAAAA .:...::.x.:.:x...x.xx.:.................x:......x:x.:.xx.....:.:...:..........:.. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 28298903 NA +3593 chr4 + 190214555 55618506 55618505 55618688 183 TGTAATTTTTAAATCTTCAAGCAGAAAAATTAACTATATGTTCCTAGCATCT--TAACTTCCTTTCTTTCTTTTCTTTC----TTTC---------TTGTCTTTCTTTCTTCTCCTTCTTTTCTCTCTCCTCTTTCTTCTTTCTTTTCTTCTCTCTTTCTTTCTCATCTTTCTTCTCTCTCTTCCTTTCTTCTCTCTT chr4 - 94230402 78374841 78374840 78375028 15855375 15855374 15855562 188 TGTTACTGCTAAAACTTCAAATAGAAAGCTT----------TCCATGCATTTATCAACTTCCTATACTATTAGTTTATAAAAGTTTCACCAACCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCTT ...x.:.x:....x......::.....:x..----------...xx....:.--:........x.x:.x:.xx.:.x.x----....---------..x..x.......:.x.....:.::...:...:....:...:::.xxx.:.:.:.::.xx:.:x.:.xx:........x..:x::.::..:....:x..... 31M10D11M2I25M4I4M9I102M 110/173 63.6% 188/94230402 0.0% 25/173 14.5% -22756335 -71474067 +5003 chr4 + 190214555 55618528 55618527 55618760 233 AGAAAAATTAACTATATGTTCCTAGCATCTTAACTTCCTTTCTTT---CTTTTCT---TTCTTTCTTGTCTTTCTTTC-----TTCTCCTTCTTTTCTCTCTCCTCTTTCTTCTTTCTTTTCTTCTCTCTTTCTTTCTCATCTTTCTTCTCTCTCTTCCTTT----------------CTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTC---TTTCTTCTTTCTTTCTTTTTCTTCTCTTTCTTTCTTC chr4 - 94230402 79478320 79478319 79478576 14751827 14751826 14752083 257 AGAAAAGTCAATT------TCTCAACATACCAACACTTTTTTTTTAACCATCTCTAAGCTCTTTGGTGTTGCTATTGCAATGTTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTTTATATTGCCAGAGGTTTTCTTACTTTCTCC ......:.:..:.------..::.:...x::...x:::...:...---.x.:...---:.....xx...:x:.x..x.-----...:.:..:..x....:..:xx:...x:....x......x....:.:......:.x...:.:.....:::...x.....----------------......:x::....::.:.:x:.x::..xx...x........x.:---.:..:.:.x.x..x.:xxxxx..:....x......:. 13M6D26M3I7M3I20M5I79M16I45M3I37M 147/227 64.8% 257/94230402 0.0% 36/227 15.9% -23859792 -70370610 +3114 chr4 + 190214555 55618565 55618564 55618633 69 CTTTCTTTCTTTTCTTTCTTTCTTGTCTTTCTTTCTTCTCCTTCTTTTCTCTCTCCTCTTTCTTCTTTC chr4 - 94230402 37306404 37306403 37306472 56923931 56923930 56923999 69 CTTACTTTATTCACTTCTGTTTTTAACTTTATTTCTTTTTCTTCTTTTTTTTCTCTTGTTTCCCCACTC ...x....x..:x...::x..:..:x....x......:.:........:.:....:.x....::.x:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 18312161 NA +7860 chr4 + 190214555 55618580 55618579 55618902 323 TTCTTTCTTGTCTTTCTTTCTTCTCCTTCTTTTCTCTCTCCTCTTTCTTCTTTCTTTTCTTCTCTCTTTCTTTCTCATCTTTCTTCTCTCT--------------CTTCCTTTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTCTTCTCTTTCTTTCTTCTCTCTCTTTCTTCTCTTTCTTTCCCTTTCTTTCTTCTCTTCCTTTTCTTCTCTTTCTTCTCTCTTTCTTCTTTCTTTTCTCTCT-CTTTCTTTCTTCTCTCTCTCTTTCTTTCTTTCTCTCTTTCTT--TTTTTTTTTTTGTCTG chr4 - 94230402 62274880 62274879 62275210 31955193 31955192 31955523 331 TTCTTTTTGGTCTTCATTAATCTCCCTTGTTTTCTCTCTCCTCTTTGTCTTTTCTTTCTTATTGTCTTGTGTCTCACTCTTTTTGCTATCTATAGCTAGGATGTCTTTCCTTACGTCtttctttccttttccttctttttccatttaatgctcagctgtttttttaatactggttttcctccatcttcttttggtgttccatttcttctctctgattttctctctgtat-------ctttcagtcttttttctttatctttct--gtcctattcagtttgctttCTGTCCTGCATGCCTGATTGTTTCCCTTTCTCTTCCTTAATATTGTCTATCATCTG ......:.x.....:x..xx.:::....x.................x.::.......::.x:.x....x:x.:::xx.....:.x..x...--------------:......x.x...:......:.:.::..::.:....:x...xx.x..:xx..x...:..:xx.x:.xx....:..:.x::......:xx:x:..:x..........:.xx..::..:...x.x.-------....:xx...:...::.:.x.......--x.:..x...xx.:.-......x..:.x:x.x:..xx..x....::.:......:...--.x..x.:.x.::.... 91M14I124M7D27M2D14M1I42M2I16M 202/314 64.3% 331/94230402 0.0% 26/314 8.3% -6656300 -87574102 +3257 chr4 + 190214555 55618677 55618676 55618747 71 TTCTTCTCTCTTTCTTCTCTCTCTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTCTTTCTTTCTTTTTCTTC chr4 - 94230402 40193303 40193302 40193373 54037030 54037029 54037100 71 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTC ..x..::x.....::.......x.::...x:.::..xx:....x..:...:..:...:..........:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 15425374 NA +3284 chr4 + 190214555 55618747 55618746 55618855 109 CTCTTTCTTT-------CTTCTCTCTCT------TTCTTCTCTTTCTTTCCCTTTCTTTCTTCTCTTCCTTTTCTTCTCTTTCTTCTCTCTTTCTTCTTTCTTTTCTCTCT-CTTTCTTTCTT chr4 - 94230402 83016315 83016314 83016430 11213973 11213972 11214088 116 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCT-------CCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTT .....:...x-------....x......------:..x.....-------...:.......x........:.....:x.::...:x..:x::.....::x...xx..:...-..::....... 10M7I11M6I9M7D61M1I11M 76/102 74.5% 116/94230402 0.0% 21/102 20.6% -27397568 -66832834 +3630 chr4 + 190214555 55618801 55618800 55618898 98 CCTTTTCTTCTCTTTCTTCTCTCTTTCTTCTTTCTTTTCTCTCTCTTTCTTTCTTCTCTCTCTCTT-------TCTTTCTTTCTCTCTT-TCTTTTTTTTTTTTTG chr4 - 94230402 78374924 78374923 78375029 15855374 15855373 15855479 106 CCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCTTG ......::x:......:.x..::....:........:.........:.xxx....::.::.xx...-------........x::.x...-...:.:...x:.:... 66M7I16M1I16M 69/98 70.4% 106/94230402 0.0% 8/98 8.2% -22756123 -71474279 +3108 chr4 + 190214555 55634853 55634852 55634910 58 TCAAGTAGGGGAGTCTCTCTTTCTGTCTCTCTCTCTCTCACACACACACCCCCCTCCA chr4 - 94230402 84145739 84145738 84145796 10084607 10084606 10084664 58 TCAAGCAGGAAGCTTTATTTCACACTCTCTCTCTCTCGCACACACACACTTCCCTCCA .....:...:::x.:.x.:.:x.xx............x...........::....... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -28510886 -65719516 +3223 chr4 + 190214555 55650388 55650387 55650461 74 CTGCAGGCTCAATTTCCTGGGCCCAAGGGCTCCTCCCACCTCAACCTCCCTAGGAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...x.:x..x:.:.....::....x...:.x.xx:x....:...::.x..x......:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 37453262 NA +3279 chr4 + 190214555 55668344 55668343 55668408 65 CTCCCGGATTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGTCCACCA chr4 - 94230402 18197139 18197138 18197201 76033202 76033201 76033264 63 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:.:..:......:.x...x.xx.x........:..:.........:.:....--...x..... 54M2D9M 49/63 77.8% 63/94230402 0.0% 2/63 3.2% 37471205 NA +3380 chr4 + 190214555 55689847 55689846 55689926 80 CTGTGAAGTGGATATAATTATTCTCA------TTTTTTAGATGAGAAAACTGAGGGTCATACAGGTTAGGTGACTTGGGTAAGGTC chr4 - 94230402 10729179 10729178 10729262 83501141 83501140 83501224 84 CTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ......:..:.:..--....:.x...------....x:..:..:...........xx...........:..:.:...xx:.::... 14M2D10M6I54M 59/78 75.6% 84/94230402 0.0% 8/78 10.3% 44960668 NA +3171 chr4 + 190214555 55705618 55705617 55705676 59 TTGAAATGTAAATGTTGCATTTCTGTTTTTTGTTTTTGTTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 35469551 35469550 35469609 58760794 58760793 58760852 59 TTGGAAAGTAGATGTCTAATCTTTGTTGTGTGATGTTGTTTTTCTTTGTTTGTTTGTTT ...:..x...:....:xx..:.:....x.x..x.x........x............... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 20236067 NA +3206 chr4 + 190214555 55705634 55705633 55705677 44 GCATTTCTGTTTTTTGTTTTTGTTTTTGTTTGTTTGTTTGTTTG chr4 - 94230402 61200150 61200149 61200193 33030210 33030209 33030253 44 GCAATTGTGTTCTTTGTTTTGGTTTTTGTTTGTTTATTTGTTTG ...x..x....:........x..............:........ 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% -5494516 -88735886 +9894 chr4 + 190214555 55752535 55752534 55752886 352 CTTTTAGCAAAACTAAGTCTTTA-----AGAATGTGCCATAAGCTCTACTGGAAAGAATATAAATAATGGAAGCCGGAGCCTAGAAAATGGCA--AGCT-----------GGCTCAGCCTCCTGTAGCATCATTCATTAGATCCAACTCCAAAAGCTAGAAGTCATAAAAAAATGCATGCAGGATTTCTTTTTAAGCATTAACACACCACTACTTTAAATGTTGTTTCTGACTGAGAAATTCCT-CTCTGCAGGTACTTTTTACCCCT--GTAACCTCAGCAAACTGCCAGGGCCTCAGGAGACTAAACAAACGGCCAACTTAAAAATTCATTATAGTATCTGCTCCCTTTCCAAGACATAAAATATACTCTG chr4 - 94230402 27347526 27347525 27347889 66882514 66882513 66882877 364 CCTTTAGTAAGACAGAACCTTTACTTTAAATATGTGCCATCAGGTCTATTAGGGAAAGCATCAATAATTAAAGTTAATGCCTGGAAACTGGCATCAGCTACGGGCATGATGACTCAACCTCTTGGAGATCCATTCATTACATTCAACTACAAAAGCAAGAAGTTAT-AAAAAATGCATGAATAAATCC--TTTAAGTATTAACACGCTGCTTCTTTAAATGTTTGTCCTGACCCAGGTGGCACTGCTCTG-----ACTTTTTTCACTTAAATGACCTTAGATTATTGCAACTGTGTCCTGGGATTAAACAAATTACTCTC-TAAAAATGTGTTATTGAAGGTTGCTACTTTGTAAGAGAGACAGTGCTCTCTG .:.....:..:..x:.::.....-----.:x.........x..x....:.:.::.:.::..x......x:...::::x....:....x.....--....-----------.:....:....:..x..xx:.........x..:.....x.......x......:..-............x.x:.x.:.--......:........:.::..x...........xx.:.....:x..:x:x:x..-.....-----.......x.x.:.--:.:....:..xxx.:...x.xx.:x..xx.:..:........:x:.:xx.-.......x::....x.x.xx.xx::x....x:....x.x.x.:.::x..... 23M5I65M2I4M11I56M1D21M2D54M1I5M5D13M2I50M1D52M 236/343 68.8% 364/94230402 0.0% 30/343 8.7% 28405009 NA +3075 chr4 + 190214555 55761550 55761549 55761608 59 TACATACTATATATATATACACATATATATATACACACATATATATACACATATATATA chr4 - 94230402 28470359 28470358 28470417 65759986 65759985 65760044 59 TAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ..x:..x..:....:........x.:..:...:......:...:....x..:.x..x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 27291191 NA +3108 chr4 + 190214555 55761557 55761556 55761616 60 TATATATATATACACATATATATATACACACATATATATACACATATATATATACACATA chr4 - 94230402 7596414 7596413 7596473 86633930 86633929 86633989 60 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:.x..::.....x..:......:....:...:....:.x.......:x..::...::. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 48165143 NA +3028 chr4 + 190214555 55770290 55770289 55770338 49 TGTCTCAA----AAAAAGAAAGAAAGAAAACAACAACAACAACAACAAAAACC chr4 - 94230402 4027211 4027210 4027263 90203140 90203139 90203192 53 TGTCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAACC .....:..----.....:...:...xx..................x....... 8M4I41M 43/49 87.8% 53/94230402 0.0% 4/49 8.2% 51743079 NA +3128 chr4 + 190214555 55780898 55780897 55781001 104 AAAGAAGATAGGGAGGGAAGAGAGAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGCAAAGAAGGGAGGGAGGGAGGGAGGAAGGGATTT chr4 - 94230402 60249501 60249500 60249604 33980799 33980798 33980902 104 AATGGGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTT ..x.::......:.:..:..:.::..x.x.....:......x......x:...xx.....x:...x:..:x:.x.xxx.x...:.x::.:x..xx.::.:.... 104M 64/104 61.5% 104/94230402 0.0% 0/104 0.0% -4468603 -89761799 +3087 chr4 + 190214555 55811154 55811153 55811223 70 CTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTGCAGGTGCCCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.:.......x.:xx...x.xx.x........:..:.........:...:..x...--......:::. 58M2D10M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 37614015 NA +3484 chr4 + 190214555 55824222 55824221 55824296 75 TATTTTTGTTCAAGACTCTATATTTTTTTCAAGTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAC chr4 - 94230402 51342034 51342033 51342108 42888295 42888294 42888369 75 TAGTTCTGTTTATCTTTTCATATGTACTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ..x..:....:.xxx:.::....x.x:..:..:.....x..............x..........xx..x..x... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 4482188 NA +10062 chr4 + 190214555 55831275 55831274 55831482 208 TTGAATAATTTATTA-----GCTTCTAAGAA-------TTTATGTAAACTAAGTATTTTTCTGTCCTACAGTGACCAAAAAGGAAGAAGTAAAAATAGTCATGGTGAAACACTACAGAATAGGTTTAGATGAAAAATATGAAGTAACAAAAAAGTGGTCTTTGAACGATCTGCAGATGATTGATGGAAAAGAAGCAGATACTGTAAGTGTTACATTTTAT chr4 - 94230402 27371198 27371197 27371412 66858991 66858990 66859205 215 TTAAGTATTTTATTATTAGAACTTTTAGGAAGTATTTGCTTGCATATCGTAACTATTTTT--GTCTTGCAGTGACTAAAAGTGAAGAAGTAGAAATATGTATGGTAAAACACTTTCGA---GATCGAGAAGAGAAATATGAAGTAGTTGAAAAGTGGTTTTTAAAAGATCTGGAGATGATTGATGGAAAAGAAGCAGATACTGTAAGTGTTATGTATTAT ..:.:..x.......-----:...:..:...-------:..:::..xxx...x.......--...:.:.......:....:x.........:.....xx:.....:.......x:x..---.:.:x...x..:............::x:.........:...:..x......x.......................................::.x.... 15M5I11M7I22M2D56M3D99M 160/203 78.8% 215/94230402 0.0% 17/203 8.4% 28460077 NA +16836 chr4 + 190214555 55837068 55837067 55837359 292 CTCTCATTCTCTTCCAGGACAATCCATTTTTTGATCTGCACTTCAAGAAAGTGTACAGTTTGGAAGCATATAGCTGTGCTTCTAAATATGCCTTTGCTCGAACTGTAAATAAGCTGAATCATGCATATCTTAAAAAGGACTTACAGATCGTGAACTTTGATTCTACATACATTAACGATGATTCCATTTGGTCCTCCAACAATAAGGATTGTTTGGTCCTTATGAGAATATGCTTTTACGCTTTCAATCTTGTGTGCTTGTCCCTATGTCCCTTGCCACTCTGAAGCTGTGT chr4 - 94230402 27373284 27373283 27373572 66856831 66856830 66857119 289 CTCTTGATTTTTTTTAGGATAATCCATATTTTGATATGCACTTCCACAAAGTCTACAGTATGGAGGCATACAGTTGCGCATCTAAATATACCTTTGCTCGAACACTAAGCAATCTGAATGAAATGTATCTTAAAAAGGACTTGAAGATTGTGAACTTTGATAGCACCTACCTAAATGATGATTCGATCTGGTCATCCAACAATAGGGATTGCCTAGTACTTATGAGAATATGCTTTTATGCTTCCAACCTTTTATGTCTCTCCTTATGTCCTTTGTC---CTGAAGATGTAT ....::x.:.:..::....:.......x.......x........x.x.....x......x....:.....:..:..:..x.........:.............xx...::..x......x.x:::.................:x....:............xx:..x...x.x..:........x..:.....x..........:......::.:..x....................:....:...:...x.:..::.x...:.......:...:.---......x...:. 277M3D12M 228/289 78.9% 289/94230402 0.0% 3/289 1.0% 28463784 NA +10661 chr4 + 190214555 55858305 55858304 55858519 215 ATTTTTCAGCTGAGAAAAGATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGAACGCCTGCTGAGCATTGTGAATGTCTGCAAAGCAGGAAAAAAGAAAAAGAACTGTTTTTTATGTGCCACAGGTGGGTATTTAGTAAGAAAG------AGTACTTGTTTTGTATCCTTTTATTATTTAGAAGATATTTCCTCTTTGTTTT chr4 - 94230402 27382772 27382771 27382983 66847420 66847419 66847631 212 ATCTTTCAGTTGAGAGAAAATGACTGCAATCAAGCATGCTTTACAGAGGGATATTTTCACTCCCAATGATGAACGCTTACTGAGCATTGTAAATGTATGCAAAGCAGGCAAAAAGAAGAGAAACTGTTTTTTGTGTGCCACA----GGTATGTAGCAATACTGCACTGTATTGCATGTCTT---TGCCTTTTTTATTCAGTTG-CATTT-CTCTTAGTTTT ..:......:.....:..:.....x..............x.....:..:..:.....:..x..x............:.:...........:.....x...........x........:.::...........:.........----.....x...:..x.xx.------.x.:.x...:..---.x.:...x.....:..xx.-:....-.....x..... 142M4D17M6I12M3D19M1D5M1D11M 168/206 81.6% 212/94230402 0.0% 15/206 7.3% 28475533 NA +10749 chr4 + 190214555 55860394 55860393 55860652 259 TGCGTTTTACTCAACAGTGACAACTGAACGCCCTGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGGAGATTTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGATCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGTAGGT----TTTTCTCAGTTCTTTGACCTGTGTTCAGAAAGCATCTTTCATTTTATAACATGGTATTACATATTCTAAAA-----TGATCTAAAAA-CAAATTAATATATATGTTTGTTT chr4 - 94230402 27383395 27383394 27383660 66846743 66846742 66847008 266 TGTACTTCACTTCACAGTGACAACAGAACGACCGGTGCAAGTAAATGTGGTAAAAGTGAAAAAATCTGACAAGGGAGATTTCTACAAACGGCAGACTGCGTGGGCACTTCGAGACCTTGCTGTTGTTGATGCCAAAGATGCTGTTAAAGTATGTGTAACTTTTTGGGGGGTTAGTGCTTGGCTCAGAA--CATCTTTTTGGTTCCAAGGCAGCGTTAACTTCCCTGAAACCAATTGCTCTAAAGCTCAGTTTAATA-ACGTGTTTGTTT ..:::..:...:x...........x.....x..x.....:..x..x.....x.....x..:.....:..:..................x......:...:.....x........:........x..x...............:.:......x..----:...:.x:.xxx..x.xx..xx.:......--.......:xxx..x:..x:::.::...xx.x::..:...-----..x......:x-..:x......-.::......... 154M4I30M2D39M5I11M1I10M1D12M 191/256 74.6% 266/94230402 0.0% 13/256 5.1% 28476999 NA +3442 chr4 + 190214555 55862976 55862975 55863055 80 CTGCAGCCTCCACCTTCCGGGCTCAAGCCATCCTCCCACCTTAGCCTCCCGAGTAGCTGGGACTACACGTACATGCCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACT ..:.....:xx.x....:...:.....:xx.:.x.xx:x..:.....::.:.........:.........:..--..... 73M2D5M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 37665850 NA +11421 chr4 + 190214555 55864199 55864198 55864417 219 TAATATCTTTTGTATATTTTTATTTTAGGAAAATCCTGAATTTGATTTACACTTTGAAAAAATATATAAATGGGTTGCCAGCAGCACTGCTGAAAAGAATGCATTTATTTCATGCATTTGGAAATTGAATCAGCGATATCTCCGGAAGAAAATTGATTTTGTCAATGTTAGCTCACAGCTTTTGGAAGGTAAAGTTAAATAA--------AAATGTATATGTAAAAT chr4 - 94230402 27384444 27384443 27384664 66845739 66845738 66845959 221 TAACATATCTTGT------CTTTTGCAGGAGAATCCTGAGTTTGATTTGCATTTTGACAAAGTATACAAATGGGTTGCAAGCAGCGCAGTGGAGAAGAACACCTTCATTTCATGTATCTGGAAACTCAATCAGAGATACCTTAGAAAAAAAATTGACTTTATTAATGTTAGTTCACAACTTTTGGAAGGTAAATTTATACAATTTCTATGATATCTGCATGTTAAAT ...:..x.:....------:.x..x:....:........:........:..:.....x...:....:...........x......:.x.:x..:.....::.x..:........:..:......:.x......x....:..:x.:..:........:...:.:........:.....:...............x...x.:..--------.x..x.::....x.... 13M6D183M8I17M 166/213 77.9% 221/94230402 0.0% 14/213 6.6% 28479755 NA +6454 chr4 + 190214555 55866785 55866784 55866920 136 TTAAAAATTTAAGCCTGTTTACTTTTCTACCCAGCTAATATTCTTTGCTTACTTTCCTCTGCTTTTTTCATACTTTTTACT-CTCCAGAACTGCCTAAAGTTACAGAAGGTGCGTAACACCTTTTCTTCTTCTATTC chr4 - 94230402 27385438 27385437 27385572 66844831 66844830 66844965 135 TTAGAAATACACACACTGTTCGTGCTTTGCCTAGCTAACATTCTCTGCTTCCTTTCCCTCTGCTTTTCCATACCTTTTAATACTGCAGAACTGCCTAAAGTCGCAGAAGGTGCGTAACACCTTT--TTCCTTTATTC ...:....x:.x:.x:xx..xx.x:.:.:..:......:.....:.....x......:::xx:....:.....:.....x.-..x................::.....................--...:.:..... 81M1I42M2D11M 101/134 75.4% 135/94230402 0.0% 3/134 2.2% 28481347 NA +15927 chr4 + 190214555 55868321 55868320 55868564 244 TTTTACCTCTTTA----AGAATCTGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGGTGATGAAGAAGTAGTAGATGAATACCAAGAGTTAAATGCAAGAGAAGAACAGGATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGTAAGACTTTCCTGAATTCTATGAATAAGTGATGTATAGTG chr4 - 94230402 27386270 27386269 27386502 66843901 66843900 66844133 233 TTTTACTTCTCTACACAAGAATCAGTTCCAAGTGGAGAGAATCAAAGTGTAGCAGGAGGTGATGAAGAGGCGGTGGATGAATACCAGGAATTAAATGCAAGAGAAGAACAGGATATTGAAATAATGATGGAAGGGTGTGAATACGCGATCTCTAATGCTGAAGCCTTTGCAGAGAAATTGTCTAGAGAGCTGCAAGTTCTAGATGGGGTAAACGTTTCTT---------------CTGATGTACAGTG ......:...:..----......x..............:.....:.....::................:.::..:...........:..:..........................:.................x........:..:.....x.....x..............:........:...........:..x.............:xx....:.---------------x.......:.... 13M4I203M15D13M 200/229 87.3% 233/94230402 0.0% 19/229 8.3% 28482051 NA +23817 chr4 + 190214555 55870670 55870669 55871247 578 CTTTGTAGGCTAACATCCAGTCAATCATGGCATCTGAAAAACAAGTCAACATCCTGATGAAATTGCTAGATGAGGCTCTAAAGGAGGTAGATCAGATTGAATTGAAACTGAGCAGTTATGAGGAAATGCTCCAAAGTGTAAAAGAACAAATGGATCAGATCTCTGAAAGCAACCACCTAATTCATCTTAGTAACACTAATAATGTAAAACTCCTATCTGAGATAGAGTTCCTTGTGGTAAGTATGATCATA--AATTACCAACAAAAAAAAACTAGTGATGATATATAAAACCCATTTGTAA------ACATTTTTTAATTTCCTTGTGAGAACAGGATTTAAAATAATTCCA--------------------------------AAGACCTAATGATAGGACTGAATAGCATCTTGC-CTGTAAATTTCCCAAAATTACACATGCAAATGGTGTGTTTGCATA-------------TATTCTAGAACCACATGGACTTGGCCAAAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGTA---TGTTCATTAGA chr4 - 94230402 27387040 27387039 27387664 66842739 66842738 66843363 625 CTGTACAGGCAAATATCCAGTCAATTATGGCCTCAGAGAAACAGGTGAATATCTTGATGAAGTTGCTGGATGAAGCTCTAAAGGAAGTTGACCAAATTGAGATAAAATTAAGCAGTTATGAAGAAATGCTTCAGAGTGTAAAAGAACAAATGGATCAAATTTCAGAAAGTAACTACCTAATCCATCTCAGCTACACAAATAATGTGAAACTACTGTCAGAGATAGAGTTCTTAGTGGTAAGCATTTTTATGGTGTTTACT--------GTGTCTGTTCACATTTGGTATAAATTTCTTCTAAGTTGCTACCTTCTTTGTCTTCTGTAGGTGAAAGTTCTTTAATATCAGTTTATTTTTCTGCTTTATTATTGCACTCAATTCAGTAAGGTTTTATAATAGAG--GAATTGTATTTATCATTCTTGGTTTAGCAAGATAGCAAGCTATAACCTGCTTTTTGCTTAAGGAAATCTATTGCTTTGTAGAATCACATGGATTTGGCTAAAGGTCACATAAAGGCCCTTCAGGAAGGAGATCTGACATCTTCTCGAGGCATTGAGGCCTGCACTAATGCAGCAGATGCCCTTCTGCAGTGTATGAATGTAGCTCTTCATCCAGGTAATGTTTTTGTTAGA ..x.::....x..:...........:.....x..x..:.....:..x..:...:.......:.....:.....:...........:..x..:..:.....:x.:...:.:...........:........:..:.......................:..:..x.....:...:.......:.....:..:x....x........:.....x..:..x............:.x........:..xx.:..:--:x....:--------:x:x..:x.x.::x.xx:..x..x::x:..x...------..x..:...:x:...:x.:x.x...x:xxx.....x..x.x.::.--------------------------------...:::.x..:....::--....x.:..:.xx.-:.x.x::...xx...:..x:..x::xxx..:xxxx.x.....x..-------------:x..x.....:........:.....:........:..........................x:.x.....:x...................:.....x..x.................:................:x.......---.x..::..... 251M2I7M8D34M6I45M32I17M2D14M1I45M13I144M3I11M 420/568 73.9% 625/94230402 0.0% 67/568 11.8% 28483630 NA +7540 chr4 + 190214555 55871845 55871844 55871977 133 TCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACTGGCCAGTCACCTCAACAATGTTTTTGTTCAACAGGTAATTTTATTTTATTATT chr4 - 94230402 27387835 27387834 27387966 66842437 66842436 66842568 132 TTAGGACATGATATGCTTCATGCAGTCAAACAGCAACAGCAGCGATTTAGTGACTTGCGTGAGCAGTTTGCACGGAGACTTACCAACCATTTGAACAGCGTATTTGTTCAGCAGGT-ATTATTTCTTATTGTT .:...x.....:x......xx..........................:.....:.....x....xx.....x........x:...::..::.x....::..x........:.....-...x.x.:.....:.. 116M1D16M 105/132 79.5% 132/94230402 0.0% 1/132 0.8% 28484010 NA +8153 chr4 + 190214555 55872683 55872682 55872916 234 TGGATTTTTACTTTATTTTCACTTTGCAATATTCTAAAACAATTGTATTTA---CTATATTTTATTTCCAATTAGTTTACTCAGGCCCTCCTTCAACTCTATAACAGGTCCTACTTTCTTTCGGTTCCTGTGAGTACATCAAATTTGGCTCAAGCTTCTCTGATTCTGTTTTTTTTTTTCTATAAAGTTTGCTAAACTTAAC-AGCAGCCGAATCTTTACAGATTATAA---------CTTACTGAT chr4 - 94230402 27388386 27388385 27388617 66841786 66841785 66842017 232 TGGATGTCTTTTCTATCTT----TCTCAATCTTTTATTGCTTTATTGTTTAGTTTTTTTTTTTATCTCCAATTAGTTTACTCAGACCCTCCTTCAACTCTATAACAAGTCTTCCTATCTTTCAGTTCCAGTGAGTACATCAGCTTTCATACAAGCTTCTCCAA--CTAATTTTTTT--------GAGCTTGACTTACCCAACTAGCAGCTGCATCTTTGTAT-TTACAATAAGAAATCCTTACTGAT .....x.:.x:.:...:..----.:x....x..:..xx:.xx.xx.:....---:.x.x......:..................:.....................:...:.x..x......:.....x............:x...x::x..........::.--..:x.......--------:..:...x:xx..::...-......:.x......::.x-...:..---------......... 19M4D28M3I109M2D11M8D18M1I19M1D6M9I9M 166/219 75.8% 232/94230402 0.0% 28/219 12.8% 28484297 NA +12688 chr4 + 190214555 55877840 55877839 55878071 232 GTCATTGTTTAGACTTTTTA----TTGTAACGTTTCTTTGTACTGTTGATTACATTTATTTACTTATTTTA-CTCACTTTAGGGTCATGATCAGAGTTCGACTCTTGCCCAACACTCTGTTGAACTGACTTTACCCAATCATCATCCATTTCATAGAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCTAAAGAGTACAGATTATGGAAAATATGAAGGACTAACAAAGGTATG chr4 - 94230402 27391662 27391661 27391897 66838506 66838505 66838741 236 GTCTTTTTTCAAGTTTTTGAACCTCTGTAGTACATCTGTATTGTGCTT-CTAGATTTATTTTAATACTTTCTCTTACTCCAGGGTCACGATCAGAGTTCTACTCTTGCTCAGCACTCTGTTGAGTTGACATTACCCAATCACCATCCATTTCACAGAGATTTGCTTCGCTATGCAAAACTCATGGAGTGGCTCAAGAACACAGATTATGGAAAATATGAAGGGTTAACAAAGGTATG ...x..x..:.:::....x.----:....::::x...x.:.xx..:.x-:..x........xxx..:...x-..:...::.......:...........x........:..:...........::....x...........:...........:...........:..x.....x..:..x...........x....::.......................::............. 20M4I24M1D22M1I165M 183/231 79.2% 236/94230402 0.0% 6/231 2.6% 28486178 NA +3004 chr4 + 190214555 55882097 55882096 55882139 43 TTTTTGTTGTTGTTGTTGTTGTATTGTGTTTTGTTTTGTTTTT chr4 - 94230402 44858319 44858318 44858361 49372042 49372041 49372084 43 TTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTT ............:..:......:....x........xx..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 11023778 NA +9772 chr4 + 190214555 55883809 55883808 55883965 157 ACTTTTATTTTAAGAATTACATGGATTATTTATCCCGACTATATGAAAGAGAAATCAAAGATTTCTTTGAAGTTGCAAAGATCAAGATGACTGGCACAACTAAAGAAAGCAAGAAGTTTGGTAAGCTT-----AGGC--ATGTCAGTTCATTATCTTCCTATTA chr4 - 94230402 27393198 27393197 27393361 66837042 66837041 66837205 164 ATTTCTCATTTAAGAATTACATGGATTATTTATCACGTCTATATGAAAGGGAAATAAAAGATTTCTTTGAAGTTGCCAAGATCAAGATGACAGGCACAACCAAAGAAGGAAAAAAGTTTGGTAAGCTTCTAGGAGGCATATATCTTTTTTTGATTTTTTTATTA .:..:.xx..........................x..x...........:.....x....................x..............x........:......:.x..:...............-----....--..:..xx..:x.x..:..::..... 128M5I4M2I25M 134/157 85.4% 164/94230402 0.0% 7/157 4.5% 28490611 NA +17257 chr4 + 190214555 55888695 55888694 55888990 296 TTCTCTCATATAATTTCTCAAACAGTAGGTGACCAACTAAACATGTGTTTGCACTTCTTGTTACTTGATGCTCATGGTTCTTTGCATGTGTCTTTTAAACTAGAGCTTTAACTTCCTCTTGTGCATGGTTTGTGCAAATTGCAGTTTATTAACTTGTCTTTGTCTTTGATGCTTGCAACCTAATCCATCACAGCTACACTGCCTCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGAGTGAGTATGCTTAG-TGTATTAGTAGGTATTCTCAATGCATGTTTGTTTAATGTCTAGA chr4 - 94230402 27396501 27396500 27396786 66833617 66833616 66833902 286 TTCTCTCA----ATTTCTAGGATAGTACCTCTCCAACTAAA--TGTGTTTGC-CATGTAGTTACTTGCTGCTTATAGTTCTTTGCATGTTTCTTTCCAGTTAGAGCTTAACTTGCATCTTGTGCATGGTTTGTGCAAACTGCATTTTA---ACTTGTCTTTGTCTTTGATGCTTGCAACCTAATCCATCCCAGCTACACTGCCTCGAAAAGAAAGTGCTGTCAAACAGGAAACTGAGAGTGAGTATGACTAGTTGCATTAGTTGGTATTGTCAGTGCATGTGTG-TCAATGTAAAGA ........----......x::.:....xx.xx.........--.........-.x.x.x........x....:..:.............x.....:x.::........x.x:.x.x......................:....x....---......................................x...........................................x.............x:...-..:......x......x...:.......x..-.:.....xx... 8M4D29M2D9M1D95M3D101M1I31M1D12M 247/285 86.7% 286/94230402 0.0% 12/285 4.2% 28492194 NA +14145 chr4 + 190214555 55890198 55890197 55890397 200 CTTTCAAAGTTTTATTATTTCTTAGGTCTTCATGGAAGTTCGGGGAAATTAACTGGATCTACTTCTAGTCTAAATAAGCTCAGTGTTCAGAGTTCAGGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGATATGGGAAACATGTCTGCCTCTGATCTCGATGTTGCTGACAGGACCAAATTTGATAAGGTAAACTAAAA chr4 - 94230402 27397878 27397877 27398077 66832326 66832325 66832525 200 CTTTCATGGTTTCTTTATTTAACAGGTCTTCATGGAAGCTCTGGAAAATTGACTGGGTCCACTTCTAGCCTAAATAAACTCTCTGTTCAGAGTTCAGGAAATCGTAGGTCTCAGTCATCCTCACTGTTGGATATGGGAAACATGTCTGCTTCTGATCTTGATGTGGCTGATAGAACAAAATTTGATAAGGTAAAGCAAAA ......x:....:x......xx:...............:..x..:.....:.....:..:........:........:...xx...............:.....:..:...........:..x..........................:........:.....x.....:..:..x.................x:.... 200M 170/200 85.0% 200/94230402 0.0% 0/200 0.0% 28492320 NA +9086 chr4 + 190214555 55891301 55891300 55891431 131 TTGGTTTTCTTCAGATCTTTGAACAGGTACTAAGTGAACTGGAGCCCCTATGTCTGGCAGAACAGGACTTCATAAGTAAATTTTTCAAACTACAGCAACATCAAAGTATGCCTGG---AACTATGGTATGGCTC chr4 - 94230402 27399352 27399351 27399485 66830918 66830917 66831051 134 TTTGATTTCTTTAGATTTTTGAGCAAGTATTAAGTGAACTAGAGCCCCTATGTCTGGCAGAACAGGACTTCATTAGTAAATTTTTCAAACTACAGCAGCATCAGAGCATCTCAGGAACAACAACGGTATGACTC ..x.x......:....:.....:..:...:..........:................................x.......................:.....:..:..x:.x..---...x.:......:... 115M3I16M 113/131 86.3% 134/94230402 0.0% 3/131 2.3% 28491949 NA +4242 chr4 + 190214555 55892626 55892625 55892742 117 TTTTTGCAGGCTGAAGCAGAGGACCTGGATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAGTATGTCTTTGTTACTATCATTGTTTATTTT chr4 - 94230402 27399976 27399975 27400085 66830318 66830317 66830427 110 TTCTTACAGAATGAAACAGAGGAAATGGATGGAGGAAATTTATCTCGTTCATACATTCCTGGTGTTCCACAGACAGTATCATCTGAGTATG-------TGCTGATGCTGTTTATTCT ..:..:...:x....:.......xx............xx.....x..x:x.:.:.x.:x...:::x....x.x.x..x.............-------.:..:x:::........:. 91M7D19M 77/110 70.0% 110/94230402 0.0% 7/110 6.4% 28492650 NA +18146 chr4 + 190214555 55893526 55893525 55893796 271 ATACTTCTTGTCTGTTTTCTGAACAGGAAAGATATGATCCGCCAAATGATGATTAAAATATTTCGCTGCATTGAGCCAGAGCTGAACAACCTAATTGCATTAGGAGACAAAATTGATAGCTTTAACTCTCTTTATATGTTAGTCAAAATGAGTCATCATGTGTGGACTGCACAAAATGTGGACCCTGCTTCTTTCCTAAGTACTACATTGGGAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACAAATGCATTGTAAGTTTTCTTTTTT chr4 - 94230402 27400327 27400326 27400597 66829806 66829805 66830076 271 ACATTTTTCTTATGTATTTTTCCTAGGAAGGACATGATCCGACAAATGATGACAAAAATATTTCGTTGTATTGAACCTGAGCTGAACAATCTTATAGCACTGGGGGACAAGATTGATAGCTTTAATTCCCTTTATATGTTAGTTAAGATGAGCCATCACGTGTGGACTGCACAAAATGTGGACCCAGCTTCCTTTCTCAGCACAACACTTGGAAATGTTTTGGTGACTGTCAAAAGGAACTTTGATAAATGCATTGTAAGTTCTTTAGTTT .:.:..:.:x.x...x..:.xxx:.....:..:........x..........:x...........:..:.....:..x...........:..x..x...:.:..:.....:..............:..:..............:..:.....:.....:..........................x.....:..:..x..:..x...:.x...................................:................:.:.xx... 271M 224/271 82.7% 271/94230402 0.0% 0/271 0.0% 28493199 NA +13393 chr4 + 190214555 55896696 55896695 55896909 214 TTGCTCTCTGCCTAACTTTAGAGTAACCAAATAAGGCAAATGGAAGAAGTAAAGATCTCAAAAAAGAGTAAAGTTGGAATTCTTCCATTTGTTGCTGAATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACTTATCAGAGGAGTATTTGTTAATGGTAAGCTTT chr4 - 94230402 27401727 27401726 27401940 66828463 66828462 66828676 214 TTTCTTTCCTTTTAATTTAAGAGCAATCAAATGAAACAGATGGATGAAGTAAAAATCTCAAAGAAAAGTAAAGTTGGAATCCTTCCATTTGTTGCTGAATTTGAAGAGTTTGCAGCCCTTGCTGAATCAATTTTCAAAAATGCAGAACGACGAGGAGATCTGGATAAAGCATATACAAAACTTATTAGAGCTGTTTTTATCAGCGGTAGGTCTT ..x..:..:x::...:..x....:..:.....:.::..:.....x........:........:..:..............:..........................:.....x.xx.....x........:...........x..:..x..x.....:..............:..x........:....xx..x...:.:.::....:.::.. 214M 171/214 79.9% 214/94230402 0.0% 0/214 0.0% 28494969 NA +3290 chr4 + 190214555 55897184 55897183 55897276 93 TGGCATGATCTTGGCTCACTGCAACCTCCACCTCCCAGGCTCAAAAGATCCTCCTACCTCACCCTCCCAAGTAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197114 18197113 18197200 76033203 76033202 76033289 87 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ......x..x..------..:..:..:xx.x..:.::..:....:x.x.:.x.xx:x....x...::...........:......x....... 12M6D75M 61/87 70.1% 87/94230402 0.0% 6/87 6.9% 37700070 NA +15187 chr4 + 190214555 55899621 55899620 55899898 278 ATGTTTATAGCTAAATATGGTCATACTCAGAGATGT-----TATTTTATTTTTTCTGTTTTGGTTTTAGTGGAGAAAGTAGCAAATGAAAGCCAGAAGACCCCCAGGGATGTGGTTATGATGGAAAACTTTCACCATATTTTTGCAACTCTTTCTCGATTGAAAATCTCATGTCTAGAAGCAGAAAAAAAAGAAGCCAAACAAAAATACACAGATCACCTTCAGTCTTATGTCATTTACTCTTTAGGACAACCTCTTGAAAAACTAAATGTAAATATATTTTC chr4 - 94230402 27402247 27402246 27402525 66827878 66827877 66828156 279 ATGTTTTTTTCTGCATTTGGTTGTCCTTTGGGAGTTCTGAATATTTTGTTTCCCTTATCTT----TCAGTTGAAAAAGTAGCTAATGAAAGCCAGAAAACACCCAGAGATGTGGTGATGATGGAGAATTTCCATCATATTTTTGCAACGCTTTCTCGGTTGAAAATTTCTTGTCTTGAAGCTGAGAAAAAAGAAGCCAAACTGAAATACACTGAACATCTTCAGTCTTACGTAGTCTACTCACTTGGGCAGCCTCTTGAGAAATTAAATGTAAGTATGTATTC ......x.xx..:x..x....::.x..:x.:..xx.-----......:...::::.:.:..----.:...x..:........x..............:..x.....:........x........:..:..:..:..............x........:........:..x.....x.....x..:................x:........x..x..:...........:..x:.:.....x:.x..:..:........:...:.........:...:.x... 36M5I20M4D218M 215/274 78.5% 279/94230402 0.0% 9/274 3.3% 28497374 NA +9117 chr4 + 190214555 55902306 55902305 55902541 236 GCAGGTC-TTAGCCATTGTTTCTTTTCATTTCCTTGAAGCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAAAGTCATTAAGGAGTACCCTGGAAAGGAAGTAAAAAAAGGTCTAGATAACCTCTACAAGAAAGTTGATAAACATTTATGTGAAGAAGAGAACTTACTTCAGGTA chr4 - 94230402 82788953 82788952 82789185 11441218 11441217 11441450 233 GCAGCTCATCAGCGGATGACTCCTTGTATTTCC----AGCACTTCTTCGAAGGGGTGAAAGCCCGTGTCGCTCAGGGGGTGAAAGAAGAGGAGATCAGTTTCCAGCTGGCCTACAGCAAGCAAGAGCTGAGGAAAGTCATTGAAAGATACCCTGGCAAGGAAGTCAAAAGAGCTCTTGAGACCCTCTACAGAAAAATCCACAAGTATCTTTCCCCAGAGGAAAACCTTTTCCCGGTA ....x..-.:...x:x..x:..:..x:......----....:.....:.....x..x:....:..:..x..x.....x:.:.::..:.....::.x....x...:..x..x.x:.:...:.....:..xx.x.........:.::::........x........x....:..x...x..x.x........::...:.:x.:..::..:.x.x:xx...:..:...:.x:.:.x.... 7M1I25M4D200M 159/232 68.5% 233/94230402 0.0% 5/232 2.2% -26886647 -67343755 +13903 chr4 + 190214555 55902342 55902341 55902545 204 AGCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAAAGTCATTAAGGAGTACCCTGGAAAGGAAGTAAAAAAAGGTCTAGATAACCTCTACAAGAAAGTTGATAAACATTTATGTGAAGAAGAGAACTTACTTCAGGTATGCT chr4 - 94230402 27403423 27403422 27403626 66826777 66826776 66826980 204 AGCATTTCTTTGAAGGTGTTGAAGCTCGTGTGGCCCAAGGTATACGAGAAGAAGAAGTAAGCTATCAACTGGCTTTTAATAAACAAGAGCTTCGTAAAGTTATAAAGGAGTATCCTGGCAAAGAAGTCAAGAAGGGATTGGATAATCTTTACAAGAAGGTAGACAAACATCTCTGTGAAGAAGAAAACTTACTTCAGGTAAACT ............................:.....x..:..:...x.:..:..:........:..:.....x..x.....:........:...........:..x........:.....x..:.....x..:..:..x:.:.....:..:........:..x..:......:.x...........:...............x:.. 204M 169/204 82.8% 204/94230402 0.0% 0/204 0.0% 28498919 NA +11494 chr4 + 190214555 55904326 55904325 55904552 227 TTTTTTTTTAATAATAGGTGGTGTGGCACTCCATGCAAGATGAATTTATACGCCAGTATAAGCACTTTGAAGGTTTGATAGCTCGCTGTTATCCTGGATCTGGTGTTACAATGGAATTCACTATTCAGGACATTCTGGATTATTGTTCCAGCATTGCACAGTCCCACTAAACCTTGTGAAAGA---AGAAAAGATAACTGA---------------ATGAAGCATTTGAGTATAACAGACACTAT chr4 - 94230402 27404364 27404363 27404608 66825795 66825794 66826039 245 TTTGCTTTTGTTGGCAGGTTGTGTGGCATTCAATGCAAGATGAGTTCATACGACAGTACAAGCACTTTGAAGGGCTGATAGCTCGCTGCTATCCTGGATCAGGAATTACTATGGAATTCACTATACAGGATATTTTAGACTACTGCTCCAGTATTGCACAATCTCATTAAAGTTCTATAAAGGGACAGAGAAGCTAGCAAAGTCTGTGCCTGTATGATGAGGGAATCAAACACTATAGACACTGT ...x:....:x.:::....x........:..x...........:..:.....x.....:..............x:.............:...........x..x:....x..............x.....:...:.:..:..:..:.....:........:..:..:....x:.:xxx....:---...:...x..:.x:.---------------....:.x.x.::.::.:x.:.......:. 183M3I15M15I29M 172/227 75.8% 245/94230402 0.0% 18/227 7.9% 28499962 NA +3007 chr4 + 190214555 55916231 55916230 55916282 52 TTTTGTTTTTGTTTTTGTTTTTTTTTTTTGGAGACGGAGTTTTGCTCTTATT chr4 - 94230402 65741001 65741000 65741052 28489351 28489350 28489402 52 TTTTGTTCTTGTGTTTGTTTTTTTTTTTTTCAAACCAAGTCTTGCTTTCTTT .......:....x................xx.:..x:...:.....:.:x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -9824770 -84405632 +3696 chr4 + 190214555 55917536 55917535 55917596 61 TGAGTTTTTTTTTGTTTTTTTTTTTGTTGTTGTTGTTTGTTTT-TATTTTGACAGGGTCTCC chr4 - 94230402 20565641 20565640 20565702 73664701 73664700 73664762 62 TGGGTTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTTTTATAATTTGACAGAGACCCC ..:..........x........x.......:.......x....-..x........:.x.:.. 43M1I18M 52/61 85.2% 62/94230402 0.0% 1/61 1.6% 35351895 NA +3304 chr4 + 190214555 55947022 55947021 55947122 101 TGACAGAGCAAGACTCCATCTCA--AAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAAAACAAGCAGCAAATAATGTAATAATTATAGCCACACAAA chr4 - 94230402 49950080 49950079 49950182 44280221 44280220 44280323 103 TGACTGACAAAAACACCACCTAATTATGTAAAAACAAAAACAAACAAACAAACAAAAAGAGATAAGTAGCTAGGAGGAAATAGAGAAATTATATTTACATAAA ....x..xx..:..x...:..x.--.x::...............x.x.x.........x.:.x..::.:x:..x.::x...:x.:x.......x::...:... 23M2I78M 68/101 67.3% 103/94230402 0.0% 2/101 2.0% 5996942 NA +6760 chr4 + 190214555 55951985 55951984 55952246 262 ACAAAAAATAATTGCTTCATATTAAAATAATTTTTTCTTCTTATTGTGAAACAACAATCATAGCTATAATAAGATAATGATGTTTCA------TTCTTTTCTCTCAGGACTTTAAT-------TTTTGGAAGTGAATAAAACTTGTTTTAGAAGACGAGATGACTACAGCTGTAGAGAGAAAGTATATTAATATTAGGAAAAGGCTGGATCAGCTGGGATACCGCCAGACTCTGACAGTGGAGTGTTTACCTTTGGTAGAAAAACTTTTCAGGTA chr4 - 94230402 27406614 27406613 27406863 66823540 66823539 66823789 250 ACAAGAAATTACTTTTCCATTCCTAGTTTCTGTATTATTCCTGCTTTAAGGGACAAGT----GCTGTAACAA----ACGATATTTTACAGGTGTCCTTTTTTTCCTGAATTTTACAAAAGCCACTTTGGAGCTG---------TGTTT--------ACAATGACGACAACAGCGGAGCGGAAGTTTGTTAACCTCAGGAAACGTCTGGATCAGCTGGGCTATCGGCAGCCCTTAGGAGTGGAGAGTTTACCTTTGGTGGAAAAGCTTTTCAGGTA ....:....x.:.x:.:...x::x.:x.xx.x.x..x...:.::.x.:.::x.xx.:.----...:...:..----.:...:...:.------.:.....:.::.x.:.:....xx-------:......:x..---------.....--------:x:.....x...:.x.::...x.:....x.:....:x.:......x.x..............x..:..x...x.::.::x.......x.............:.....:........... 58M4D10M4D11M6I23M7I11M9D5M8D119M 163/237 68.8% 250/94230402 0.0% 38/237 16.0% 28545371 NA +9648 chr4 + 190214555 55953079 55953078 55953303 225 TTTTAGCGACTTAGTTCATACAACTGAGAGCCTTCGGCAATCAAAATTATCTGCTGTGAAAGCTGAAAAAGAAAGTGCCAATTTTGATTTTGTTTTGGAACCCTATAAACTTGAAAATGCAAGATTGAGTAGAGAAAATAATGAATTATACCTAGAGTTAATGAAACTGAGAGAACATTCAGACCAACACGTTAAAGGTAA-GTGAAAATT-TGATAATTTTTAAAA chr4 - 94230402 27408398 27408397 27408624 66821779 66821778 66822005 227 TTCTAGTGACCTTGTTCATACAACAGAGAGCCTGCGCAGTGCAAAGTTATCTGCTGGAAAAATTGAAAAAGAGTGCAGCAATTACGATGCTATCATAGAGCCATATAAAACTGAGACTGCAAAACTTACCAGGGAAAATAATGAGCTGCATTTGGAAGTATTAAAACTGAAAGAGCAATCTGATCATCATATTAAAGGTAATATAAAGATTACGAGACTTCTTAAAA ..:...:...:.x...........x........x..xx:xx....:..........x:...::.........:x.::x.....x:...x:.:.:x.:..:..x......x:...:.x.....:.:.x.x:..:...........::.::.::.:..:x..x.:.......:...:..x..x..:..x..::..........-:.:..:...-:..x.x..:...... 201M1I9M1I15M 158/225 70.2% 227/94230402 0.0% 2/225 0.9% 28544681 NA +10551 chr4 + 190214555 55954202 55954201 55954389 188 TTTTTCATTTTAAGAGTTGAAAACTTCATTGAAGAAATGTGCACGTGAAACAGCTGATCTGAAATTTCTGAATAACCAATATGCTCATAAACTCAAACTGTTGGAGAAAGAGAGCAAAGCTAAGAATGAAAGAATTCAACAACTTCAAGAAAAGAATTTGCATGCTGTAGTACAAACTCCAGGTAAAT chr4 - 94230402 27408895 27408894 27409082 66821321 66821320 66821508 188 TCTCTCCCTTGAAGATTTGAAAGCCAGCTTAAGGAGGGCTGAAAATGAAGCAGCTGACTTGAGATTCCTGAATAACCAGTATGTGCATAAAATCAAACTGCTGGAAAAAGAGAGCAAAGCCAAGACTGAAAAAATTCAGCAGCTTCAGGAGAAGAATCTGCAAGCAGTGGTGCAAACTCCTGGTGAGT .:.:..x:..x....x......:.:xxx..:.:..::xx..x.x:....:.......::...:...:...........:....:x......x........:....:..............:....x.....:......:..:.....:..:......:....x..x..:..:........x...:.:. 188M 142/188 75.5% 188/94230402 0.0% 0/188 0.0% 28545307 NA +9558 chr4 + 190214555 55957216 55957215 55957387 172 TTTTTAGGTGGCAAGAAAAGAAGTATTGCTTTCAGGCGCCAGCGTATGCAAATTGATGAACCGGTTCCTCCCTCTGAAGTCAGTTCATATCCAGTTCCTCAACCAGATGACCCTTACATTGCAGACCTCCTTCAAGTGGCTGATAACAGGTGCATTAAATAATTCTTTCTTG chr4 - 94230402 27410721 27410720 27410892 66819511 66819510 66819682 172 TTTTCAGGTGGCAGAAAAAGAAACATCCCATTCAGGCGTCAACGCATGCAGATAGACCAGCCTGTTCCTCCATCAGCTGTTAGTGCTTATCCAGTGCCTCAGCCAGAGGACCCGTACATTGCAGACCTTCTTCAGGTGGCTGATAATCGGTAATCTAAAGAATTTTTACATG ....:........::.......::..:x.x........:..:..:.....:..x..:x.:..x........x..x.xx..:...x.x........x.....:.....x.....x..............:.....:...........:x...:xx:....x....:..x.x.. 172M 132/172 76.7% 172/94230402 0.0% 0/172 0.0% 28546495 NA +5155 chr4 + 190214555 55959577 55959576 55959786 210 GAGAAGCTGAAAGTATAGAATTTATGAAATAACACATCTAGCTTCGTTTCTTATTTTGTATTTCTTAACAAAAGTGTATTGGCATTAATTTAAAGTGCTTTTCAGGATTCAAGAACTTCAACAGGAAGTCCACCAGCTACAAGAAAAGTTAGCAATGATGGAAAGTGGGGTGAGAGACTATAGCAAGCAGGTAGGATTTTTATTTACTTG chr4 - 94230402 27412371 27412370 27412554 66817849 66817848 66818032 184 GAGAAAATAACAGTATTGAATTTTCGTG----CATGGATGGCT-CATTCATGAATCTACAT-------CAACAGTATATTGCTA-------------CATTTCAGAATACAAGAACTTCAGTCAGAAGTAACACAGTTACAAGAAAAGCTAGAGATATCAGAAAATGGAAAGAAGAATTACAGCAAGCAGGTATG-TTTACATTTATTTG .....:x.:.x.....x......x:.x:----..::xx.:...-.:..:x.x.x.:.::..-------...x...:.....x:.-------------.x......:..x...........::x:.....xxxx...:...........:...x:..:x::....:...::x..:::.:..:............x.-...x:.....:... 28M4D11M1D17M7D16M13D98M1D14M 126/184 68.5% 184/94230402 0.0% 26/184 14.1% 28547206 NA +7282 chr4 + 190214555 55964267 55964266 55964412 146 TCTTCA--GATTGAGCTAAGAGAACGAGAGATAGAACGACTGTCAGTTGCTTTGGATGGTGGTCGGTCCCCTGATGTCCTTTCTCTGGAGTCTAGAAATAAAACCAATGAAAAGCTTATTGCTCATTTAAATATTCAGGTAATGGCTT chr4 - 94230402 27413375 27413374 27413522 66816881 66816880 66817028 148 TCTTCAAAGGTTGAGCTTAGAGACAAAGAAATAGAACGCCTCATGCTAGCATTGGATGGTGGTCGTTCTCATGAAGTTATATCTCTGGAATCAAGAAGTAAAAGCAATGAGAAACTTATTGCCCAATTAAATTTGCAGGTAATAAATT ......--.:.......x.....xx:...:........x..xx::x.x..x..............x..:.x...x..:x.x........:..x....:.....x......:..:........:..x......x.x........::x.. 6M2I140M 112/146 76.7% 148/94230402 0.0% 2/146 1.4% 28550892 NA +12777 chr4 + 190214555 55965639 55965638 55965873 235 TTTAGGTTGACTTTCTTCAGCAAGCTAATAAAGACCTGGAGAAGCGTATACGAGAGCTTATGGAAACCAAGGAAACAGTGACATCTGAAGTCGTTAATTTAAGTAACAAAAATGAAAAACTCTGCCAAGAATTAACTGAAATAGATCAGTTAGCACAGCAGTTGGAAAGACATAAAGAAGAAGTGCTTGAGACTGCTGATAAAGAGCTTGGGGAAGCAAAGGTAATGAATGATAT chr4 - 94230402 27415149 27415148 27415383 66815020 66815019 66815254 235 TTTAGGTTGAATATCTTCAGCAGTCAAACAAAGAACTTGAAAATCGCATTCAAGACCTCTTGGACACAAAAAAAAATGTGACTAGTGAGGTAGTGCACTTAAGCAATAAAAATGAAGAACTCTGTCAAGAACTGAATGAAATAGACCATTTGGCACAGCAGTTGGAAAGACATAAGGAAATTGTGCTTGAAACTGCAGATAAAGAAATAGGAGAAGCAAAGGTAATCAGTAGTGT ..........x.x.........:x.x..:.....x..x..:..x..:..x.:...x..:x....x..x..::...xx.....xxx...:..x..xx.:.....:..:.........:.......:......:.:.x.........:..x..:.......................:...:xx........:.....x........:x.x..:..............x.:.::.:. 235M 180/235 76.6% 235/94230402 0.0% 0/235 0.0% 28550490 NA +4432 chr4 + 190214555 55969005 55969004 55969134 130 TATGACTTAAGTATTCTTAGACTTTTAAGTATATACCT--------AATAGGCTTTTTATTCCTAGAAAGAGATTAAAAGAAAGCTCTCTGAAATGCAGGATCTTGAAGAAACAATGGCAAAACTTCAGCTGGTAAGT chr4 - 94230402 27415912 27415911 27416046 66814357 66814356 66814491 135 TATAACAAAGGAATTGTTG---TTTTGAGTATGTAACTTTATTTTTAAAGTTTGTTTTGTTGACAGAAGGAAATTGAGAGAAAGGACAGTGAAATACAGGATCTTGAAGAAACAATAACGAGGCTTAAATCAGTAAGT ...:..xx.:.x...x..:---....:.....:..x..--------..x:xx:x....:..xx:....:..:...:.:......xx.xx......:....................::.:.::...x.::::...... 19M3D16M8I92M 88/127 69.3% 135/94230402 0.0% 11/127 8.7% 28553093 NA +6010 chr4 + 190214555 55971249 55971248 55971428 180 TTATAGTATTAAAATTTGCAGGAATTGAACTTATGCCAGAAAGAAAAGGAGAGACTGAGTGATGAACTCCTTGTAAAATCAG------------ACCTAGAA--ACTGTTGTTCATCAGCTTGAACAAGAAAAGCAAAGACTTAGCAAAAAAGTTGAAAGTTTTGCAGTTACAGGTAAGATGTCAAATTTTGAT chr4 - 94230402 27417003 27417002 27417194 66813209 66813208 66813400 192 TTGTAATATTTATTACTTGAGGAGTTGAGCTCATGTCGTCGACAGAACGAGAGATTGAGTGAAGAACTCTTTGGAAAAGCAGATGATAAAGAGAATCTTGAACTACTGCTG--AACCAGCTTGAACAAGAAAAACAAAGGCTGACAGAAAAAACAGAGAACTTTGAAATAAAAGGTAAATGATAAAATGTAGAT ..:..:....x.xxx:.xx....:....:..:...:.:xx:.x.:..x......:.......x......:...x....x...------------.:..x...--....:..--x.:.................:.....:..x.xx:.....::x..:.::....x.:.x.x......:xx:.x....x.x... 82M12I8M2I7M2D81M 125/178 70.2% 192/94230402 0.0% 16/178 9.0% 28554246 NA +8600 chr4 + 190214555 55974739 55974738 55975000 262 TTTACAGAACGACAACTTACTCTGGAGGTTGAGAGGATGAGACTAGAACATGGAATAAAACGTCGAGACAGGTCACCTTCTCGTTTAGATACATTTCTGAAAGGTATAGAAGAAGAACGAGATTATTATAAGAAAGAGCTAGAGAGACTCCAACATATAATACAGCGAAGATCTTGCTCTACAAGTTATAGCGCACGTGAAAAAAGTTCAATATTTAGAACACCAGAAAAGGTAATGTCCCT-TTATAAGAGTAGGCCAGAAA chr4 - 94230402 27418180 27418179 27418412 66811991 66811990 66812223 233 TTGGCAGAACGAGAACTTGTCCTAGAAATAGAAAGAATGAGATTAGAATACGGTATAGCTCTAGGAGACAAATCTCCATCTCGTCTAGATGCATTTGTCAAAACTTTAGAAGATGACAGAGATTATTATAAAAGAGAATTAGAGTATCTTCAGAAAATGATAAAACGAAGACCTAGCC---CAAGTCGTAG------------GAGT---------------CCAGAGAAGGTAACGTTCCTATTGTCAATACAGGCTGGAAA ..x:........x.....:::..:..::.x..:..:......:.....:.:..x...:xx.xxx......::..x..x......:.....:.....x.x...:x.x.......x..xx.............:.:...::.....x:x..:..:x.x..:...x.:......:..x..:---.....::...------------:...---------------.....:.......:..:...-..:.x.:x::....::.... 178M3D10M12D4M15D20M1I20M 165/232 71.1% 233/94230402 0.0% 31/232 13.4% 28556559 NA +8667 chr4 + 190214555 55980108 55980107 55980315 208 TGATGATTATATTTTG--------TTTTTTAATTATGTTTCAGGGTGATTACAATTCAGAAATTCATCAGATCACAAGAGAAAGAGATGAACTTCAGCGTATGCTAGAAAGATTTGAAAAATATATGGAAGATATACAGTCCAATGTTAAATTATTGACAGCAGAAAGAGATAAACTAAGTGTCTTATATAATGAAGTAAGAAATGTATTATAATT chr4 - 94230402 27418800 27418799 27419006 66811397 66811396 66811603 207 TAATTAGTATATTTTGACCTCAATTTTATTAATCACTTTGCAGAGTGA----AGATCTGAGATT-----GATCACTAGAGAAAGAGATGAGCTACAGTCCATGTTAGACAGATTTGAAAAGCATATGATAGAAATTCAATCCAATGTCAAGCTACTGACTGCAGAAAGAGACAGATTAAATATTCTTTATGAGCAAGTAAGAAGATCTTTATATTT .:..x.x.........--------...x.....:.:x..x...:....----.:x..x..:...-----......x..............:..x...:x:...:....x...........::.....:x...x..x..:........:..::..:....x...........:.:.:...:.:.::.x...:.xx.........:xx:x.....x.. 16M8I24M4D12M5D147M 149/199 74.9% 207/94230402 0.0% 17/199 8.5% 28561308 NA +5212 chr4 + 190214555 55981202 55981201 55981390 189 AATTTATATCTTTTCATTCTTTAAGGCTCAGGAAGAATTATCTGCCCTAAGAAAGGAATCCACCCAAACCACAGCACCCCATAATATTGTT------AGTCTTATGGAAAAGGAAAAAGAACTTGCGTTATCTGACTTAAGAAGAATTATGGCAGAAAAGGAAGCTTTAAGAGAAAAATTAGAGGTAAGAAGATT chr4 - 94230402 27419534 27419533 27419707 66810696 66810695 66810869 174 AACTAATAACTTTTTA------AAGTCTCAGAGTGAATTAAACAGACTGAGAAGAGAA---------------GCAAAACATAATTTAGTTTCTCAAAGTCATGTGGGAGAAGATGGAGATGCTTCACTGGCAGACTTTAGAAGACTGATGGCAGAAAAGGAAAGTCTAAGAGAAAAGTTAAAGGTGAGACTATT ..:.x...x.....:.------...x.....::x......xx::xx..:....::...---------------...xxx......x.x...------....x.:...:.:.:..x::...xx:.x.::.:x.x.....x......x.x...............:x.:..........:...:....:...xx... 16M6D36M15D18M6I98M 118/168 70.2% 174/94230402 0.0% 27/168 16.1% 28561668 NA +6405 chr4 + 190214555 55991909 55991908 55992102 194 TACTGTTTTTTTATTT---AAATTATAGCTTGAAAGCGAAAAATATGAATTAAAGTCTAAAGTGTTAATAATGAAAGAAACAATAGAGTCGTTAGAGAACAAATTAAAAGTCCAAGCTCAAAAATTTAGCCATGTGGCTGGTGACTCATCTCATCAGAAAACAGAGGTGAACTCACTTAGGTAAGTTT-ATTCAAAAT chr4 - 94230402 27420463 27420462 27420660 66809743 66809742 66809940 198 TAATGTCTTTTTATTTTTTCAATTGCAGTTTGAGTTGGAAAGGTGTGAACTAAAGAGTACAATCTCTATCCTGAAAGAAAGAATAAAGTCTTTGGAAAATGAATTAAAATTGAAGTCCAGTAAACTTATCCAAACATCTGATGATTCTTCTCAACTTAAAGCTGAACTTTGCTCACTTCAGTAAGTCTAATACAAAAT ..x...:.........---x....::..:....:xxx....::.:....:.....xx..x.:.x.:x..xx.........x....:....x..:..:..::........x.xx.:x.:x:x...:...x...x:::x...:...:..x.....x.xx...:.x..:x.xx:.......x:......:.-..x...... 16M3I169M1I9M 131/194 67.5% 198/94230402 0.0% 4/194 2.1% 28571446 NA +13198 chr4 + 190214555 55999261 55999260 55999652 392 AGATAAAGAATACC---ATTTGTTT---TTGTCCATTGATTCTTTAGGATAGTGAATGAGCAGCTACAGCGGTCAGTTGATGACTATCAGCACCGACTTTCCATAAAAAGAGGTGAACTTGAATCAGCCCAAGCACAAATTAAAATACTGGAGGAAAAGATAGGTAAATGTTTTAAAATTTTGTTTCTGCTAATCCTAATGTACTTTGTCTAACAAACATTTCT----TTTCATTTGTAGATGAACTAAACCTTAAGATGACTTCACAGGATGAGGAGGCTCATGTAATGAAAAAGACCATTGGTGTTATTGATAAAGAAAAAGACTTTCTCCAGGAGACTGTAGATGAGAAGACAGAAAAGATTGCAAATTTGCAAGAAAACCTAGCTAATAAAGTATGTG chr4 - 94230402 27422083 27422082 27422476 66807927 66807926 66808320 394 AGTTAAAGAGTTCCCAAATATCTTTCAATTGTATACTGATTTTCCAGCCTCTTAAATGAACAACTTCAGAGGACTGTGGAAGACTTACAGCACCGATTATCTCTCAAAAAGGATGAACTTCAGTCAGCTCAAGAAGAAATTGTAAAGCTAGAGGAGAAAATAGGTGATCACTAGTTATTTTTACCTTTGTT--TCCTG------TTTTGAAGACAAGAATACTTACTGTTATATTTATAGATAGGTTAAACCAGAAGAGCACTTCACAGGATGAGGCAGTCAATGTGCTTAGAAGTACTATAACTGTTTTGGACAAAGAAAAGGATAATCTTCAAGAAACTGTAGATGAAAAAACAGAAAAAATTGCGTGCTTAGATGACAACTTAGCTAACAAGGTATGTG ..x......:.x..---..x.x...---....x:.:.....:.::..xx.xx.:.....:..:..x...x..x.x..x..x....xx.........:.x..:x.x....::.:.......x.:.....:....x.x.....:x..x:..:.....:..:......:.x:::.xxxx.x....:::.:..:.--....:------...xxxx:....:x..x::.----..x:....:.....::::......xx....xx................x:.::x....:x.x.:..:x..:..x:x....x.x..:........:..:xx...:..:..:...........:..:........:.....:x::..:x.x..x...:.......:..:....... 14M3I8M3I163M2D5M6D20M4I174M 262/384 68.2% 394/94230402 0.0% 18/384 4.7% 28577178 NA +9947 chr4 + 190214555 56009719 56009718 56009955 237 ATCACTCATTTAACAGCCAGCTGAAAGAAACATTGGTTAATCGAGATCGTGAGATAAACAGCCTCCGGCGCCAGCTTGATGCAGCTCACAAAGAACTCGATGAAGTAGGAAGATCTAGAGAAATCGCTTTTAAGGAAAACAGAAGACTGCAAGATGACCTGGCTACAATGGCAAGAGAAAATCAAGTATGAACACAAGGCATAAATTTTGATAGTTTTATACTTTCCATTGTTTGCT chr4 - 94230402 27423690 27423689 27423924 66806479 66806478 66806713 235 ATCTCTCACTCAATAGCCAGCTAAAGGACCTCCTGAGCAGCAGAGACCGTGAAATATCTAGCTTACGTCGCCAGCTTGATGCATCCCACACAGAGATTGCAGAAACAGGAAGAGTAAAGGAAATAGCTCTGAAAGAAAATAGGCGACTACAGGATGACCTAGCTACAATGACCAGAGAAAACCAGGTACCAAGATAGTACAT-ACTGTTGA-AGTATTGAATTATTTATTGCTTGCT ...x....:.:..:........:..:..xx:x:..:x:.::x....:.....:...xx:...:.x..x...............x.:....x...:x.:.xx...::.......x:x.::.....x...:.x..:.....:..:x....:..:........:.........:.x........:..:...:x..x.:.:x:...-.x.x....-...x..:x.:.x.::....:..... 202M1D8M1D25M 164/235 69.8% 235/94230402 0.0% 2/235 0.9% 28586029 NA +12538 chr4 + 190214555 56011780 56011779 56011991 212 TTTTATTGTGATTAAACCAGGAAAAAGAAAATCAAGATTTGTTAGATAGATTTCAGATGCTTCATAACCGTGCTGAAGACTGGGAGGTCAAAGCCCATCAAGCTGAGGGAGAAAGCAGCTCAGTTCGACTGGAACTTCTTTCTATTGACACTGAGAGGAGACATCTTCGAGAAAGAGTGGAGCTATTAGAAAAAGAAATTCAAGAGGTAATA chr4 - 94230402 27428523 27428522 27428732 66801671 66801670 66801880 210 TTTTACTGC--TTCACCTAGGAAAAAGAAAACCAAGAATTATTAGAGAAGTTCCGAATGCTCCATACACAAGCTGAGGACTGGGAAATCAAGGCTCATCAAGCTGAAGGGGAAAGCAGCTCAATACGACTTGAACTCCTTTCTGTAGATACGGATCGGAGACATCTTCGAGAGAGAGTAGAACTTCTGGAGAAAGAGATTCAAGAGGTAACA .....:..:--..x.x.:.............:.....x..:.....x.::..:.::.....:....xx.:x.....:........::....:..:...........:..:............:.x.....x.....:......:.x..:..x..xx................:.....:..:..x:.:..:.....:.............:. 9M2D201M 165/210 78.6% 210/94230402 0.0% 2/210 1.0% 28583257 NA +8590 chr4 + 190214555 56017633 56017632 56017862 230 TTTTTCTTTTTTCAGCACATAAATGCCCATCATGCTTATGAATCTCAGATCTCATCAATGGCAAAAGCCATGTCTCGATTAGAAGAAGAGCTGAGACATCAAGAAGATGAGAAAGCAACAGTATTAAATGACTTGTCATCTCTTAGAGAACTTTGCATTAAACTTGATTCAGGCAAAGATATTATGACCCAGCAATTGAATTCGAAAAACCTTGAGTTTGAGAGGGTAAG chr4 - 94230402 27429623 27429622 27429852 66800551 66800550 66800780 230 TTTGTTTTTGTTTAGCATATGATTGCACATCAAGCTTATGAATCTCAGATCTCCTCCATTACAAAAAATATGTCTAAATTGGAAGAGGACATTAAACGTGAACATCAGGATAAGTCCTCCGTGCTGGCTGACCTGACTTCTGTGAGAGAACTTTGTGTTAAGCTTGAAGCTAGCAAAGACCTTTTATCTCGACAGCTTGCATCTAAAAGCATGGATTATGAAAAGGTAAG ...x.:...x..:....:..:.x...x.....x....................x..x..x:.....:x:......x:...:.....:..xx.x.:..:.x..x.xx.x..x..:x.xx.x..::.::x....:..x.x...x.x...........::....:.....xx.x:.......:x..x.:x.:.::..::.x:xx..x....:.x.x..x.x...:.:...... 230M 155/230 67.4% 230/94230402 0.0% 0/230 0.0% 28588010 NA +11890 chr4 + 190214555 56019350 56019349 56019586 237 TAGGTTGTGGTGGAATTAGAAAATGTAAAGTCAGAGTCAGACCTACTGAAAAAACAACTTTCAAATGAGAGACATACAGTTAAAAACCTCGAATCATTGTTGGCTACAAACAGAGATAAAGAATTTCATTCTCACTTAACCTCCCACGAGAAGGATACAGAAATCCAGCTACTTAAGGAGAAGTTAACCCTTTCTGAAAGCAAATTGTAAGTGTCTTAAGTCA-------------ACTTATGCAAAGAC chr4 - 94230402 27430464 27430463 27430711 66799692 66799691 66799939 248 TAGGTTCTAGGTGAATTAGAAGATGTTAAATCAGAAGCAGAGTTGCTGAAAAAGCAGTTATCCAGTGAGAGACTTACAATTCAGAATCTTGAAACATTGCTGGCTACCAGTAGAGATAAAGAATTTCAGAACCATTTAACGTCTCACGAAAAGGATTCAGAAATTCAGTTATTGAAAGACAAGCTAACACTTGCCGAGGGGAAACTGTAA--GTCTTAAGTTATGTGTTTTACGTGACTTACACAGAGAC ......x.:.xx.........:....x..:.....:x....x:.:........:..::.x..x.:........x....:..x.:..:..:...x.....:.......x.::.................xxx:..:.....x..:.....:......x.......:...:..:.x..:..x...:....x...x.:..::.x...:.....--.........:.-------------.....::..:.... 210M2D11M13I14M 179/235 76.2% 248/94230402 0.0% 15/235 6.4% 28588886 NA +6384 chr4 + 190214555 56020661 56020660 56020855 195 TAATTTGTTTTTAAGAACTAGTCAAAGCCGGGAAAACACCATGCTTCGAGCTAAAGTGGCACAGTTACAAACAGATTATGATGCTCTGAAAAGGCAGATCTCAACTGAAAGATACGAACGGTAAGACAAATTTTTTTTACATTTGACAATGTTTTTATGTGTTCTCTATTGTACTTCAGAAAGTA-------TTTAATATGG chr4 - 94230402 27434356 27434355 27434547 66795856 66795855 66796047 192 TGGTTTTTTTTTCAGAAGCAGTCATAATAGAGAGGTTTCCATGCTTCGAAGTAAAGTTGCGCAGCTGCAGACTGACTATGATGTTTTAAAAAGACAGCTGACGACTGAAAGATTTGAACGGTAAGA-GGCTGTTTTCTTCATATGGAGG---------GGGTTCTCTTTCTCATTTTGAAAACTGGCTTTTTTTTAACATGG .::...x.....x....x:.....x.::x.:..::x:x...........:x......x..:...:.:..:..x..:.......:.:.:.....:...x.xx.:..........x:...........-::x.x....:.x...x..:x::---------.x.......x.:x:.:..:::...x.:-------.....:.... 126M1D22M9D27M7I10M 127/185 68.6% 192/94230402 0.0% 17/185 9.2% 28586305 NA +3493 chr4 + 190214555 56023671 56023670 56023792 122 TATAATATATAT-CACATAAT--ATATATATAATATACTGTATATTATATGTAATATATATTGTATCATATATAGTATAT-------CATATATAGTATATTATATATAGTATATTGTATTTTATATAGTAT chr4 - 94230402 48211465 48211464 48211596 46018807 46018806 46018938 132 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ...x....x...-..:.::.:--......x:x..:.............x.x.x......xx.:.::.....x..x:....-------......:x:....:x..x...::xx:....x..xx...::..... 12M1I8M2I57M7I45M 85/122 69.7% 132/94230402 0.0% 10/122 8.2% 7812206 NA +3746 chr4 + 190214555 56042462 56042461 56042601 140 TCCTTCCCTCCCTCCCTCCTTCCT-------TCCTTTCTTCTTCCATCCCTCCCTCCCTTCCTTCCTTCTC-----------------TCCTTTCTTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCCCCTCCTCCTCCTCCCTCCCTCCCTTCCTC chr4 - 94230402 77707045 77707044 77707206 16523197 16523196 16523358 162 TCTTTTAACTCCTCTCTCCTTATCAACAGAGTCCCTCGGTATTCC--CCCTCCTTCGCCTTCTTATTTCTCGGAGGAATCACCAGATCTCCTCTCTTCCCCTTCTCTTTGTGACTTTGTTTCTCTTCGCAGCTCTCCTCCGTCTCCTGCCACCACTCCTCCCTC ..:..:xx::....:......x::-------...:.:xx.x....--......:..x.:.:...x:.....-----------------....:.......:......:.x.xx..:.x.:.....::x:xx:..:.....x:.....x..x..x::...:.... 24M7I14M2D24M17I76M 92/138 66.7% 162/94230402 0.0% 26/138 18.8% -21664583 -72565819 +3297 chr4 + 190214555 56042512 56042511 56042582 71 CTTCCTTCCTTCTCTCCTTTCTTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCCCCTCCTCCTC chr4 - 94230402 179499 179498 179569 94050834 94050833 94050904 71 CTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTC ...:::.:........:xx:...:x.x.:.x..:.:.x...:.::...:...:......:.....:..... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 55863013 NA +3246 chr4 + 190214555 56042537 56042536 56042605 69 CTTTCTCTCTCTCTCT-CTCTCTCTCTCTTTCTTTCCCCTCCTCCTCCTCCCTCCCTCCCTTCCTCCCCC chr4 - 94230402 90116977 90116976 90117046 4113357 4113356 4113426 70 CTGTCTTGCACTCCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTC ..x...:x.x...:..-.................:x...:......:::...:..:.:x....::.:::. 16M1I53M 49/69 71.0% 70/94230402 0.0% 1/69 1.4% -34074440 -60155962 +3144 chr4 + 190214555 56056584 56056583 56056637 54 TATAAAAAAAAAACCAAAAAAAAAACAAACAAAAAAAACACCCTCTCCCCGAAA chr4 - 94230402 17429023 17429022 17429076 76801327 76801326 76801380 54 TACAAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAACCCCACCCTCCAAA ..:..:........x...x..............x....x....:x:..:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 38627561 NA +3057 chr4 + 190214555 56101763 56101762 56101826 64 AAAAAAAAAAAAAAAAAGAATGTGTTACTAAACAATGTATGATACGATTGTGCATATATTAAAC chr4 - 94230402 88135015 88135014 88135078 6095325 6095324 6095388 64 AAAAAAAAAAAAAAAAAGAATGTAGTCCTAAAAAACTTGTAGTGAAATTGTGAAGGGATTCAAC .......................:x.x.....x..:x.:.::.:x:......x.x:x...x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -32033252 -62197150 +3092 chr4 + 190214555 56119239 56119238 56119355 117 CTATAGTTTAGAAAGTTTTAGACTTTTTACAATGGGGTAAATTTTCAAGGAATGTTACAAAGTGATATGTAATTGAGTTCTATTCTCAGTCTTTTTTTTTTTCTTTTTTTCTGAGAC chr4 - 94230402 91437277 91437276 91437386 2793017 2793016 2793126 110 CTATTAGCCAGAAATTTATAGTAGTCTCA---TGAGGTAGA----AAAGGAAACTAAAGAAATGATATTTAGTTAAGTTCTATCATTGGGTGTTTTTTTTTCTTTTTTTTAATAGAC ....x:x::.....x..x...xxx.:.:.---..:....:.----x......xx.x.x:..:......x..:..:........:x.::.x:x.........::.......xxx.... 29M3D9M4D72M 74/110 67.3% 110/94230402 0.0% 7/110 6.4% -35318038 -58912364 +3049 chr4 + 190214555 56119322 56119321 56119370 49 TCTCAGTCTTTTTTTTTTTCTTTTTTTCTGAGACAGTCTTCCTCTGTTG chr4 - 94230402 60903208 60903207 60903256 33327147 33327146 33327195 49 TTTCAGCCTTTTTTTTTTTTTTTTTTTCCAGCACAGTTTTAGTCTGTTG .:....:............:........:::x.....:..xx....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -4783886 -89446516 +3299 chr4 + 190214555 56122310 56122309 56122383 74 AAAAAAAAAAAAAAAGAATTTTTAAATTCAAAAAAGAAAAAAAAAGTCAGGAAAAGCAGGGAAGGGGAAAAAGA chr4 - 94230402 64536499 64536498 64536572 29693831 29693830 29693904 74 AAAAAAAAAAAAAAAGAATGTTTGAATTGTTAAAGCAAAAAAAAAATCTAAATAAGCAAAACAGAAAAGCAGGA ...................x...:....xxx...:x.........:..x::.x.....:::x..:::.:x.:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -8414189 -85816213 +3379 chr4 + 190214555 56123582 56123581 56123728 147 CACAATTTAGTCCATAGAAGGTAGGCAGTC-TTATTAATCTCGTTTTATAGATGAGGAAACAGAAGCATAGAGAGGTCAAACAATTTGCCCCAAATTACTCAGCTAGTAGGTG-AAAGGCCTGGGATTCCAGTCTG-GGCATCCATCTTC chr4 - 94230402 10729169 10729168 10729305 83501098 83501097 83501234 137 CACAAT---ACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC----------TGGGTACAGAATCCAGGTATGTGGGTGTGTGACACCCATCTTC ......---::..x.:x:.......:.:.:-:...:.::::.:.....:..:..:.:....x..:...:.x.x....:..::.........x:.:.:----------.:...:-.:.:x..x..x..x:x:..x..-.:..:........ 6M3D21M1I66M10D6M1I22M1I13M 88/134 65.7% 137/94230402 0.0% 16/134 11.9% 45394413 NA +3033 chr4 + 190214555 56161527 56161526 56161591 65 CTGTAGCCTCCGCCTCCTGGGCTCAAGCGATTCTGCTGCCTCAGCCTCCCAAGTAGCTGGAATTA chr4 - 94230402 18197126 18197125 18197190 76033213 76033212 76033277 65 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA ..::....:xx:x..:.....:.....:.x...xxxx.x........::.............:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 37964401 NA +3761 chr4 + 190214555 56184149 56184148 56184228 80 CAACCCCCGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCATG chr4 - 94230402 18197129 18197128 18197206 76033197 76033196 76033274 78 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...xx:x..:.::..........x...x..x.x........::.:.........:......--.:..::....::.. 64M2D14M 57/78 73.1% 78/94230402 0.0% 2/78 2.6% 37987020 NA +3005 chr4 + 190214555 56216979 56216978 56217025 47 TCCGTCTCAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAGAAAATGT chr4 - 94230402 27825830 27825829 27825876 66404527 66404526 66404573 47 TCCATCTCATAAAAAAAAAAAAAAGATGAAAAATAAAAGGAACGTGT ...:.....x................x:.....x....:...x:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 28391149 NA +3483 chr4 + 190214555 56223834 56223833 56223905 72 CTGCATCCTCGAACTTATGGGCTCAAGTGATTCTACCACCTCAGCCTTCCAAGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..x..:x:.:...x....:.......x...xxxx:x.........:...........:......x.::. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 38026708 NA +3354 chr4 + 190214555 56231026 56231025 56231101 76 TCCTGGAAAATATAGAAAAGTAAAAAACAAAACAAAACAAACAAACAAAAAAATTGTTAA-------CAAACACTTTACCTAA chr4 - 94230402 24339895 24339894 24339976 69890427 69890426 69890508 82 TTCTAGAAAAGTGATAAAAGAAATTAATAAAACAAAACAAACAAACAAAAAAA-TGTTAAGATACTCCAAACCTCTTATCTGA .:..:.....xxx.x.....x..xx..:.........................-......-------.....x::...:..:. 53M1D6M7I16M 60/75 80.0% 82/94230402 0.0% 8/75 10.7% 31891131 NA +3313 chr4 + 190214555 56267196 56267195 56267267 72 CTACAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTATAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:..:xx:x..:.:.........::x...x.xx.x........::.............:..:.x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 38070070 NA +3212 chr4 + 190214555 56271095 56271094 56271146 52 AACTCCATCTCAAAAAAAAAAAAAAAAAAGTTTTTAAAAATAGTTGTCAGAC chr4 - 94230402 71765206 71765205 71765257 22465146 22465145 22465197 52 AGCTCCATTTGGAAAAAAAAAAAAAAAAAAAGTTTAAAAGTGGTTGTCACAC .:......:.x:.................:xx.......:.:.......x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -15494111 -78736291 +7375 chr4 + 190214555 56272277 56272276 56272496 220 CAGCCCTGCCACACTGCAGCATGTGTTTGTTTTACAATCCACAGACAAGAAGAAGGGAGGCAAATTCCAGCCTTTTAAAAAGTTGTTTGGCAAAAGGAAAAAGAAAGACCCTTCGTTGTTCCGGGTGCCGTCGTTGGGGAAGAAGAGTTACTCTCACCAGAGTGTCAGCAATGGGACCTTCTCTTCGGATGAGGAG----ACCCTGGAAGACAATCTAAGGTAA chr4 - 94230402 27518527 27518526 27518732 66711671 66711670 66711876 206 CAGCCCTGCC-----------CGTGTTTGTCTTGTCATCTGCAGACAAGAAAAAAGCAGGCAAGTTCCAGCCCTTCAAGAAGTTATTTGGCAAACGGAAGAAAAGGGAACCTGTGTCAGATTGCGAGGAAGCCAAACTGAAGCCGAGCCACTCCTTTGGGAACGTCTGCAATGGTACCTTCTCCTCTGACGAAGAGCCAAACACTGGG-------CTGAGGTAA ..........-----------:........:..::x...::..........:..:.x......:........:..:..:.....:.........x....:..:.::..x...x:..::xx::.x.x.xx:x.xxx:xx....xx...::....::x:x:..::...x.......x........:..x..:..:...----..x....:-------..:...... 10M11D175M4I8M7D9M 140/202 69.3% 206/94230402 0.0% 22/202 10.9% 28753750 NA +3865 chr4 + 190214555 56273289 56273288 56273454 166 CTGCCTGCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTACGTCCCTCCCTCCCTCCCTCGTTTCTTCCTTCCCTCCCTC----CTTTCTTCCCTCTCTCTCCCCCACTTCTCCCTTTCTTCCCTTCCTTCCTTCCTTCTTTCTTTC-CCCGCCTC chr4 - 94230402 91731756 91731755 91731924 2498479 2498478 2498647 169 CTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTT--CTCCATCTCTTAATACATCCATCCCCGCACCCGCCTC ..x:....:..x...:.:...::........:..:....:xxxxx..:..:..xx:x::.......:x:::.xx.....x..x..:...x:.::.----...x..x..x..x.:x::.....:.x:......--:...x.::...xx.x.x.:.x.:.::x.-........ 95M4I33M2D28M1I8M 101/164 61.6% 169/94230402 0.0% 7/164 4.3% -35458467 -58771935 +3008 chr4 + 190214555 56294917 56294916 56294973 57 AAAAAAAAAAAAAAAAAAGTAAAAAGAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAA chr4 - 94230402 90390567 90390566 90390623 3839780 3839779 3839836 57 AAAGAAAAAAAAAGATAGTTAAAAAAAAAAAAAAGAAGGGCACAGAAATAGAGGCAA ...:.........:.x.:x......:...........::.x.x.....x.:..:x.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% -34095650 -60134752 +3060 chr4 + 190214555 56295076 56295075 56295126 51 AAGTAAAAAAAGTAAAAACAAAACAACAACAACAAAAAACAGACAAGTAGA chr4 - 94230402 16619856 16619855 16619906 77610497 77610496 77610547 51 AAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCTGTAGA ..:.:......::.....xx...................x.:..xx..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 39675220 NA +10274 chr4 + 190214555 56298208 56298207 56298371 164 TTCCAGGTCCTTCAACTATTCTATGGGAACCCGGGCATTTTCCCATGACAGTATTTTTATCCCTGATGGGGGAGCAGAAAGTGAGCAGACAGTTCAAGCAATGTCACAGGACAACATCCTGGGCAAAGTCAAAACTCTTCAGGTAAGACAGCTTGAGAGTGGAA chr4 - 94230402 27531868 27531867 27532029 66698374 66698373 66698535 162 TTCCAGGTCTTCCCATTATTCTATGGGCAGTCGAGCTTTTTCCCATGACAGCATTTTTATACCTGATGGGAGAACAGAGAGTGAACAGGCCATCCAAGCAATGTCACAGGAGAACGTTTTAGGAAAAGTCAAAACTCTTCAGGTAAGAAA--CTGCAAGTGGGA .........:.:.x.:...........x.x:..:..x..............:........x.........:..:....:.....:...:.x:.:.................x...:.::.:..x........................x.--:..x:.....:. 150M2D12M 132/162 81.5% 162/94230402 0.0% 2/162 1.2% 28766340 NA +6864 chr4 + 190214555 56307514 56307513 56307741 228 CTTTCTTCTGTTTCTCTCCAGCAACAGTTGGGCAAGAATATCAAGTTTGGGCAGCGGTCACCCAATGCCATTCCCATGAATAAGGCAAACAGTGGAG----AGGCTAGCTTAGAAGAGGATCTGTTCCTGACCAGTCCCATGGAAATTGTGACTCAGCAGGACATCGTCCTCTCAGACGCAGAGAACAAGGTAAGTCTCCTCCAGGGAATGACTTGATGGCTC----------ATAAACCAG chr4 - 94230402 27540184 27540183 27540420 66689983 66689982 66690219 237 CTCCCTCTTTTTGTTTTTCAGCAACAGTTGGCCAAGAATATAAAATTTGGGCAGCCTCCGCAAATGACAATTTCTGGG----AGGACAATGGGGGAGGCAAATGCTAGTGTAGAAGAGGATGCATTTCTTGGTAGCCTCATGGAGATTGACTCTCAACAGGACACGGTGCTCTCAGAGAGTGGTAATAAAGTAAG-CACTTCAAATTGACGTTTTCATGGCTTTATAGTGATAATAAACCAG ..::..::.x..x:.:.:.............x.........x..:..........xx:.:.xx.xx:.x...:.::x.----...xx..::.x....----.x.....:x...........x::..:..x:x:..:.:......:....xxx....:.......:x..x........x:xx.:x..:..:.....-.x.:..x.:xx:.:.x:..x......:----------......... 78M4D15M4I94M1D27M10I9M 151/223 67.7% 237/94230402 0.0% 19/223 8.5% 28767330 NA +10154 chr4 + 190214555 56313193 56313192 56313383 191 ACAGGTTGCTCCCGTTAAACCGTCTCGGCCAAAAAGGCACTTCTCTTCTGCTGGCACCATCGAAAGTGTCAACTTAGATGCCATCCCCCTGGCCATCGCTCGCCTGGACAACAGTGCCGCCAAGCACAAGCTGGCTGTTAAGCCAAAAAAACAGAGGGTGTCAAAGAAGCACAGGCGCCTTGCCCAGGTGT chr4 - 94230402 27543896 27543895 27544086 66686317 66686316 66686507 191 ACAGGTAACTCCAGTCAAGTCATCTCGGCCAAAAAGACAATTTTCCTGTTCCGGCACAATTGAAACAATCAATCTGGATGCAGTTCCCCAGGCTGTTGCTCGTCTAGACAACAGTGCAGCTAAACACAAGCTGTCCGTAAAGCCAAAAAAGCAGAGGATGTCCAGAAAGCACAAGAGATTAACAAAGGTAT ......x:....x..:..::.:..............:..x..:..:.x.x.:.....x..:....xx:....::.:.....x:.:....x...::.:.....:..:...........x..:..:.........x.:..x...........:......:....x.::.......:.x.x:.x:.xx....:. 191M 140/191 73.3% 191/94230402 0.0% 0/191 0.0% 28769297 NA +38363 chr4 + 190214555 56314107 56314106 56316695 2589 AGGACAAGCCAACGTGGCACGAA---GAGGAACCCAATCCGCTGGATTCCGAGGAAGAGAGAAGACGCCAAGAAGACTACTGGCGAGAACTGGAGGCCAAGTGCAAGCGGCAAAAGGCGGAAGCAGCCGAGAAGAGACGCCTAGAGGAGCAGAGGCTGCAGGCGC-TGGAGAGGAG--------GCTTTGGGAA------GAGAACAGAAGGCAGGAGCTCTTGGAGGAGGAGGGCGAGGGGCAGGAGCCGCCTCTAGAGGCGGAAAGGGCGCCGCGGGAAGAGCAGCAGCGGAGCCTGGAAGCGCCAGGTTGGGAGGA---CGCGGAGCGGAG------GGAGCGTGAGGAGCGCGAGCGCCTGGAGGCGGAGGAGGAGCGAAGGCGTCTGCAGGCCCAGGCCCAAGCGGAGGAGAGGCGGCGGCTGGAGGAG-------GACGCCAGGCTGGAGGAGCGGAGGCGGCAGGAGGAGGAGGAAGGAAGATGCGCGGAGGAGCTCAAAAGGCAGGAGGAGGAGGAGGCTGAGGGATGGGAAGAGCTGGAACAGCAGGAGGCGGAGGTGCAGGGGCCGCCCGAGGC---------------GTTGGAGGAGACTGGGGAGGGCC------------GGCGGGGCGCGGAGGA---GGAGGATCTGGGGGAAGAGGAG------GAGGAGGGCCAGGC------GCACCTGGAGGACTGGAGGGGGCAG---------------------CTCAGTGAGCTTCTGAAC------------GACTTTG------AGGAGAGGCTCGAA---------GACCAGGAACGCCTGAAACCCGAAGGACAAAGAGAACACTCCGAGGAGCCAGGTATTTGCGAGGAGCAGAACCCAGAGGCC---GAGCGGCGAAGAGAGCAGCAGGGAAGGAGCGGGGATTTCCAGGGGGCCGATCGTCCTGGGCCCGAGGAAAAGAGAGAAGAAGGGGACACGGAGCCTCTC--------------CTGAAACAAG--AGGGGCCGGTGGAAGCCGCGCAGCCTCCGGTGGAGAGGAAAGAAGCCGCCGCCCTTGAACAAGGCCGCAAGGTGGAGGAGCTGCGGTGGCAGGAGGTGGACGAGAGACAGACCATGCCCCGGCCCTACACGTTCCAGGTGTCCTCCGGAGGGAAGCAGATTCTCTTTCCCAAAGTCAACCTGAGCCCCGTGACGCCCGCAAAGGACACGGGGCTCACCGCTGCTCCC--CAGGAACCAAAGGCC-CCCAAAGCCAGCCCAGTCCAGCACGCCCTACCGTCGTCCCTGAGCGTTCCCCACACCGCCATTCTGGTCACGGGCGCGCAGCTCTGTGGCCCGGCAGTCAACCTGAGCCAGATCAAGGACACCGCGTGCAAGTCCCTCCTGGGCTTG---GAGGAGAAGAAGCACGCGGAAGCCCC--AGCTGGGGAGAACCC--------TCCCCGAGGCCCCGGCGACGCGAGGGCGGGCAGCGGGAAGGCTAAGCCCCGCCAGGAGTCTCCCAGCAGCGCGTCCGCACTCGCAGAATGGGCTTCCATTCGGTCCAGAATCCTGAAGAACGCAGAGAGTGACCCGCGCAGC-AGCGAGAGGGACCAGTTG-----AGGCCCGGTGATGAGTCCACTCCCAGGGGCCGGTGTGATTCCCGCGGGAACCAACGGAAGACTCCGCCAGTCAATGCAAAGTTCTCTATTATGCCTGCCTGGCAGAAATTTTCCGATGGTGGCACGGAGACCTCCAAACAGAGCACGGAAGCTGAAAGCATA-------CGAAAAAGACCCATGCTGGGACCCAGCGAAGAGACAGCCCCCCAGCCTCCTCCTGCTGGTGTTCGCGAG------------------------------CTCGGGAAGGGTCCGGAGAAGTCGGAGATGCACCGGGAGCCCGCAGACACCACCGAGGGATGCAAATTTGCCAAAGACCTCCCGTCTTTCCTTGTCCCAAGCCTTCCTTACCCTCCGCAGAAAGTGGTGGCCCACACAGAGTTCACGACCTCGTCGGACAGCGAGACTGCAAACGGGATAGCAAAGCCAGACCCTGTGATGCCAGGTGGAGAGGAAAAAGCCTCACCGTTTGGAATAAAATTGAGAAGGACCAACTATTCCTTGCGCTTCAACTGCGACCAACAGGCAGAACAGAAGAAGAAGAAGAGGCACAGCAGCACCGGAGACAGCGCGGATGCAGGGCC---------GCCTGCAGCGGGGAGCGCTCGTGGAGAGAAAGAGATGGAGGGTGTGGCCCTCAAGCATGGTCCATCCCTCCCCCAAGAGCGGAAGCAAGCCCCTTCCACCCGGAGGGACTCCGCTGAACCTTCCAGCAGCCGCTCTGTT-------------CCTGTGGCCCACCCTGGGCCTCCACCGGCCAGCAGCCAGACCCCGGCTCCGGAGCACGACAAGGCAGCAAACAAAATGCCACTGGCACAAAAGCCAGCACTGGCTCCCAAGCCCACCAGTCAGACCCCACCAGCATCCCCACTTTCCAAACTGAGCAGGCCCTACTTGGTAGAGCTGCTGTCTCGCCGAGCGGGG--------AGGCCGGACC---CAGAGCCAAGTGAGCCGTCCAAGGAGGACCAGGAGAGCAGTGACCGCCGGCCACCCTCGCCCCCAGGCCCCGAGGAAAGGAAGGGACAGAAGAGGGACGAGGAGGAAGAGGCGACAGAGAGGAAACCTGCTTCCCCACCTCTGCCTGCCACTCAGCAAGAGAAACCTTCTCAAACACCCGAGGCCGGGAGGAAAGGTAGGT chr4 - 94230402 27547618 27547617 27550281 66680122 66680121 66682785 2664 AGGACGAGCTACAGAGACAGGAACTGGAAGAACAGAAGCACCAGGAAT----GGGAAAAACAAGAGAGAGAGAAG----CTGG--AGGAACAGAAGCACTGGGCGTGGGATGaacagcagagacag-------gag----ctggaggaacagaagcgtcaggaacacagacaagagctgcagcagcactgggaacaggaggagcaacaaagacaagagttggaggagcagaaatgccaggaacaggaacaac----agagacagaa-----gctggaggaacggaagcactgggaactggagaagcagaagaggcaagagctagaggagcaaaaacaccaggaatgggaagagcagaagcacaaggagctggaggaggaacagagaaatgtgctgg---------aggagcaggagAGGCTAGAGCTGGAAGAACTGAGGCAACACGAGACTG----AGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAA---TAAGGAA---GAAAAACAGAGACAA---GAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGAACCAAGAAAACATAAACTCACCAAACAAATGCACTTGGAAAGTACAGACATTGTGCAACAAGATGAACTGAAACAGCAAAAGGAACAAGAGTGGAACAAACTGGAAGAGCAGAAAATAGACACAGAAGGGCAAAATCTTCATCGGAAGCAACAGGAAAAATCCTTGGAGCAGCAAAATGACAAG-----AATGAGCTGTGGTCTG-GGGGGGCTGATAG----GAATCCAGCAAATGACAAGCTCCAGGAGAGACCAAGACCCCCAAAAATCAAACAGCCTGAAAAAGGCAATAAAACAACAGAAGAAATCCTGTCCCAGAAACTGAAGAGAGAAGTTGATGCTCAAGAGCAACAGCGAATTGGGGAAGAACTTAGGTGGCAGGAGGTGGATGAAAGACAAACTGCATCCAGACCCTTCACATTTCAAGTGTCTTCTGGAGATAAACAGATCATATTTCAGAAAGTAAATCTGAGTCCAGTCATGCCTGCTAAAGGAGCAGGACTCTCTTCTCCATCCGTCAAGGACAGCAGGATGCACGCCTCCAGCAAGGGCTCTCATACGCTCCCATCATCTGTGTGTGTTCCCCATACAGCCATTCTGGTTACTGGAGCACAGCTGTGTGGCACAGCAGTTAACTTGAACCAGATAAAGGACACAGCTTGTAAATCATTGCTTGGCTTAACAGAAGAGAAAAAAAATGTGGATATTCCTTCACCGGAGAAAGCCCAGAAAAAATCTCCTGGTCCCAAAC----------CCAGCAGCAGTAAAATGAAATACACACAAGAGGCGTTGGACCA---GGCCACGTTAGCTGAGTGGGCCTCTATCCGTTCTAGAATCTTAAAGAATAAGGAAAATGGCAAATACAATGAGAAAGACAGAGTAAATGTCTGCAGACACAGTGATGACTGGACGCCCCGGGGAAGAGGTTCTCCTCATGGTAACTTGAGGAAAACCCTATCTGCAAATGCAAAGTTCTCAATAACACCAGCGTGGCAGAAATTTTC------------AGAAGCTTCCAAAACCAATTCAGGCACTGAGAATATAAGTGCAGCAAAAGGCAATGAAAAAGTGGCTGTGGGAAGAAACATT------GGCTCGTCC-ACTGATGCAAATGAGGATGCAGTATCCACATTTAAGGATAACTTATCTGAAATGGCTAAAGAGAAAATAGAAACCCACAGTGAAATTACAGACAACACAGAAGGTTGTAAATTTGCAAAAGATCTTCCGTCTTTCCTTGTTCCGAGTTTTCCCCGTTCTCCAGGTAAAGAGTTACCCCAACCCGAACTTCCAGGTGCTCTGGAAAATCAGCAGAGTAACAGCACAAAAAAACCAGATAAACCAGCACCAAATGGAGAAGAGAACGTTTCTCCCTTTGGGATAAAGTTACGGAGGACAAACTATTCTTTACGTTTCCATTATGATCAACAGGCGGAGCAGAGGAAAAAGAAAAGGTA---CAGTGCAGGAGACAGTTTTGATGGTGTGCCTGACCCGCTACTCACAACAGAAGGC---------GAAAAGGAATCAGCTGTTTTTGCTCCACAAGAGAGTACATCCCCTGGCACAGGGAAAGCGAATGTCCACGGCAGTTTAAAAGACTCAAAAGGTTCTT----CAGTTATCGTGTTGGAGATTTCACAACCAGTGGGC------GCACCACTGCCACCCCCCAGCCAGAGTGCTTTACCTCCTCATGAGAAACAAGCGTGCAAATCGCTGTTCCCACAGAAACCTGCTTTAGCTCCGAAGCCTGCCAGCCAGACACCTCCATCATCTCCTCTCTCGAAAATGAACCGATCACACCTGGCTGATACGCTG-------GGGCAGAGGTTTGTTAAGGCTGAATCGGACGGGGGCTGGAGA-------AAAGATGAC----AGAGCAGTGCC-----------------------TCCTGTGGCACTGAACG---AGAGCAAAAATGAAGAGGAAGAAATCAGAGAGAAGAAGTCATTTTTCCCATCTCTGAGTATTCCCTGGAGAGAAAAAAATGACAAAAAGCCTGAGCCATTGAAGAAAGGTATGT .....:...:.xx.x.:..x...---..:....xx..x.xx.x...x.----..:.:.:.x....x:xx:.....----....--..:.x::..:..xxx.x..:x.x.:::..x:..:..::...-------...----..:.....:....:..xx....x:.-::..x.:...--------..x:......------...x.xx:...:..:...:.xxx....x..:.:x..x...::.....:.x:.----....:.:...-----..:.x:....x:.x....x:..::x.....::x..x:::xx..x.:..---x.x.....::.:------...::.x..:....:x:...:.xx....x:.........:.::..:x:.x...x..---------.:.x.x.........x:x:......:..:-------:..:.x..:...----..x::x..:.x........:......:...:x::xx:......:.xx...:::.x:.x...:x.::.---.:...:.---...:.:.x.::...:---...x::..:.x.x.:.:..:x..x..:..---------------.:x:...:.::xx.xx.......------------:.x::.:..x...:..---.x..x..:..::....:::..:------.....:.:...:x.------..xx.:....:.xx::x:.::....---------------------....x::.:.xxx..x..------------...x...------.:..x:::..x:..---------..x..:..::.xxxx....:x....::..:.:.:x.x..x.x..:.:..x.::.x..:::x:.:....:x.xxx.:.:x..---....:..:..:x..xx..-----..x....x.x.:.:.x-:......:...x.----.:::..::x:..x::x:..xxxx...:..x..x:..x.:.:.--------------......x.:.--.x:::x.::::....xx::x.x.:.:.x.:x:xx..:..:.....::.x:..:.xx..:...x:x..x.xx.x...:..:..xx................:..:.....:..:::::..x.:....x...:..:..:.....:..:....:x..:.....:x.x....xx.....x..:.....:..x..x.:...:..x..:.:x:.:..:...x.:x..x.x:..--..:.:..x:x...x:-.x.:xxx.....xx:.x.:xx..::.x..x..:..:..:x..x.:........:..x...........:..x..x..:.....x......x.:.....:...:...:......x........x..x..:..:..x:.x..x.....:---..:.....:..:x.:.:...x:::..--x:.:..:..:.:...--------..:..x:.x...x::.----------.x:.....:.x..:::x..::x.xxx..:...x.x::x::.x:---.x..:.::.x..x..:.....:..:..:..x..:......:.:.....::x:..:.:..:.xx:::..::-..x:...x:..x:.:x..-----..:.x.:.......x.xx..x...x....xx.:x..xx.:.:.::..x...:x:x....:..:.:::.x.:x..............x..x.::..x..x..............------------:..::.:......xxx.::x.:.:x:....:.::...-------.:...::x.x:x.x:xx.x.:.:xx.x.....:...x:------.x...x...-:...:..:xx::...------------------------------:::.::.x..x.xx:.....:x::..:.:x...x.x..:x:::......x...x..:..x..:........x.....:..:..............:..:..::....:::::....:x:x....x.x.:x....xx.x..::.:x.::x:x.x::...x.::x..xxx:xx...:.x.:.:x...:.....:xxxx:::::...::......:..:..x.::..x..x.....:.....:..:x.:.....x........:..:..:...x.:.::..:........:..:....:...:.....:...:.---...::.x........:x:x....xx.x...---------:.:::..:.:.:::..---------..:..:..:x::.xx.x.x.x..:.:xx.:x.x:..x......::xx.xx..:.x:::x.x.x.:..x:xx..x::x:.::.....x:xx.:x:...----...:::::x....-------------..x....x.------.x:..x.::..:x..xx........x:x.xx:x..xxxx..:..x..:xx...:x:....x:..:::.xx....:..:..x..x:.:.....x.....::....:.....x..x...x....:..x..:..x...x...:.x.::.x:..:...:x..xx:....-------.:..:.:.--------....:.:.:.---.:.:.x.x:.x..-------..:..x...----.........x.-----------------------:..:.x..x.xx...x.---...:x.:::.:..:........:::x.x.....:...::.xx:..:....:.....xx.:::x.:::.x:...:...xx.xx:x...x:..:...x.xxx..:........x.. 23M3I22M4D23M4D4M2D41M7D3M4D25M1I10M8I10M6I52M4D10M5D48M3I12M6I56M9D29M7I12M4D67M3D7M3D15M3D29M15I23M12I16M3I22M6I14M6I25M21I18M12I7M6I14M9I81M3I18M5D16M1D13M4D42M14I10M2I227M2I15M1I147M3I26M2I15M8I16M10D43M3D70M1I18M5I113M12D37M7I38M6D9M1D15M30I311M3D30M9I16M9D97M4D13M13I9M6D165M7D8M8I10M3I13M7D9M4D11M23D17M3D114M 1467/2429 60.4% 2664/94230402 0.0% 395/2429 16.3% 28766489 NA +13119 chr4 + 190214555 56323348 56323347 56323574 227 CAAACCGTTCTTTGTCTTATTCCCCACAGAGAAGCCGATGCTTCAGAGCAGACACTCCTTAGATGGCTCCAAACTTACAGAGAAAGTGGAAACTGCTCAGCCGCTGTGGATAACGTTAGCACTGCAAAAGCAAAAGGGGTTTCGGGAGCAGCAGGCGACGCGGGAGGAGAGAAAGCAAGCCAGAGAGGCCAAACAGGCAGAAAAGCTCTCCAAAGAAAATGTGAGTA chr4 - 94230402 27551923 27551922 27552149 66678254 66678253 66678480 227 CAACCAATTATTTTCATGTTTCCTTTCAGAAAAACCAGTCCTCCAGAGCAGACACTCTTTGGATGGCTCTAAATTGATGGAAAAAGTTGAAACTTCACAACCACTGTGGATCACATTAGCACTGCAAAAGCAGAAGGGATTTCGTGAGCAGCAAGCTACTAGGGAAGAGAGGAGACAAGCCAGAGAGGCAAAGCAAGCAGAGAAGCTGGCTAAAGAAAATGTAGGTA ...x.x:..x...x:x.xx....::x....:..:..::.x..:..............:..:........:...:.x.::..:.....x......x.x..:..:........x..:.................:.....:.....x........:..x..xx....:.....:.::..............x..:..:.....:.....xx.:...........::... 227M 174/227 76.7% 227/94230402 0.0% 0/227 0.0% 28771425 NA +7376 chr4 + 190214555 56324124 56324123 56324329 206 TGGAAGCAGCAGTGTCAGCAGAGCAGGTTCCCTGCACAAGTCCACTGCTCTGCCAGAAGAGAAGAGGCCCGAGACTGCAGTGTCCAGGCTTGAGCGCAGAGAACAGCTGAAAAAGGCCAATACTCTTCCTACGTCTGTGACAGGTAGAGAGCAGGTCCA---TTGCTTT----GTAACTGTAGTTCCAGGTTTCTCTTTGTAGAGCGTGCTTT chr4 - 94230402 27553025 27553024 27553235 66677168 66677167 66677378 211 TAAAAGCAGCAGCAGCAGCAAAACGAGCGCACTGCAGAAACCTACACCTCAGGAAGGGGAGAAGAAAATCGAGACGGCTGTGTCAAGACTAGAACGAAGGGAGCAGCTGAAGAAGTCTAACACCCTTCCAACTTCTGTGACAGGTACAGAG-AGATTCACCTTTACTCTAGCAGTAA-TATAGTTTTAGTATTATTATGGTTTTGCATGTTTT .::.........::x.....:.:.::.:x.x.....x..::.:..xx...x.xx..::.......::x:......x..x.....x..:..x..:..x..:..:........:...x.:..:..:.....x..x.............x....-..:.:..---..:..:.----....-.:.....::..xx..x.:x.x..xxx..:..:... 151M1D7M3I7M4I4M1D35M 142/204 69.6% 211/94230402 0.0% 9/204 4.4% 28771099 NA +12416 chr4 + 190214555 56327612 56327611 56327970 359 ACTTTTTCCTTTTCCTTCAAAACAAAATCCAGTGGAGATCTCCGACTCGGCTCCCCCAGCGCCGCTGGTAAAAGAAGTCACCAAGAGGTTTTCCACCCCGGATGCTGCCCCCGTGTCAACAGAACCAGCCTGGCTGGCTTTGGCCAAAAGGAAAGCAAAGGCTTGGAGCGACTGTCCACAGATTATTAAGTAAAGAGTGACTCTCACCCATCCCTACTGCCAGTTATTGGCTCCTCTCTTGCCCTTTTTATTTATTTATTTTTTATATGGGGTAAAGAAATCAAGCTAGGGAAAAGAAGCATGTTTTATAGGCTCCAAAATAATGTTTAGAAACTGAACTGGTGGT------------GTTCATTGTAAAG chr4 - 94230402 27554509 27554508 27554841 66675562 66675561 66675894 333 ACTTGTTTTGTTTCCTCCTCCCCA-----CAGTGGAAATTTCAGATTCTGTTCCACCACCACCACTGGCAAAAGAGGTGGCCAAGAGATTCTCCACACCTGATGCGAACCCCGTGTCAACAGAACCAGCCTGGCTCGCACTGGCCAAGAGGAAAGCAAAAGCCTGGAGTGACTGTCCACAGATCATAAAGTAAACTGTAAAATT---ACATCTCTATTGCAGCCTACTAACTGCTTT------CTTTTTATTTATTCAGCTTTTAAACACATGACAAAACT-----------GAAAATGCATGTATTGGAGGA-------------CTGGAAACTGAACCGATTACCATTTTGCTCTAGCTCACTGTAAAG ....x..::x......:.xxxx..-----.......:..:..x..:..x.:...x...x.:..:....:......:..x:.......:..:.....x..x.....x:x...........................x..x:.......:...........:..:.....:..............:..x.......xx..:.xx:.---x....:...:...x:x:..:.::..x..:.------.............:.x:.....x.::x:xx.x.:..x.-----------:..:.x......x..:x...x-------------:.:..........:.:.x::------------.:...:....... 24M5D175M3D30M6D38M11D21M13D20M12I13M 235/321 73.2% 333/94230402 0.0% 50/321 15.6% 28773103 NA +18017 chr4 + 190214555 56338422 56338421 56338809 388 ATAAATCCAGACAATAAACATAATTATCTCTACACCCAATAATGAGCATTGATTCCAGGACCACAGGAGAAGAGAAGACTTCTCCAGGAAGTTCATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGCATAGACCCTTGAAGTAGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCATGGGAACCAAAAAATATTTTTTGCTCTGATGGT---GAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAACCTATAACAAGTAATAAAA chr4 - 94230402 27558967 27558966 27559356 66671047 66671046 66671436 390 ACAAATCTAGGCAATAAACATAATCATTTCTACAGCCAACAACAAGCTTTGTTCCCCATACTATGGGTGATGAGAAAACCTCTCCTGGAAGCGTATCTATTCCTTCTGCTGTTCCACTCCTGGCATTCAGGATCCACACTTTGCCATCTGTAGATACTGCTGCCAAAAGAACTTTGTTCTTTGAGTCATCACTTTGGAAAACAAATGGCGTTCCATATACGCTTGAAGTGGCTTCAAATTTCCACAGTAAATTCCCCTCCGTATTACAGCAGTAGATAAAGTGATCATGGGAGCCAAAAAATACTTCTTGCTTAGTTAAGCTAGAGATGCATGGAGATGAAAACACCGGTCCATTAGTGGAAAACTGCCAAACCTACAG-AAATAACATAA .:.....:..:.............:..:......x....:..::...x...x.:..x:x..:.::..x..x.....:..:.....x.....:x:..xx.:x.:..x::x.xx.......:x:.xx.:..:............x.....x......:.........:x.:x.:..::..x:.xxx:.::.x::.x......:....:..:...x....x..x........:.:.............x.:.::.xx..:.:.:.:.....:............::.........:..........:..:.....:x.x.::x---...:.:..:..:........x.::......:.:..:..:..............:.:-..:...:.x.. 320M3I56M1D11M 275/387 71.1% 390/94230402 0.0% 4/387 1.0% 28779455 NA +6878 chr4 + 190214555 56342831 56342830 56342977 147 TTACCTGTTCTCCAAAGTGAGTAAAGCAGAGTAAATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCAGTAGCCTGTCACAGGA chr4 - 94230402 27560371 27560370 27560517 66669886 66669885 66670032 147 TTACCTTTTCTCCAGAATGAGTGTAACAATATAAGTTTCCATCCACACATCCAATACAAACACACTTCTCATTGCAGTGAGGAGAAGAGAAAAGTGGTTTTCCCAGGAAACTCTTCCAAATCTTATTCCCTGTCACCTGTCAACGGA ......x.......:.:.....:x.:..:x:...:..:.....:.....x..........:.:...x:xx::x:..x..x..:........:...........xx:.:..:x:........xx::.....x..x:.......xx... 147M 104/147 70.7% 147/94230402 0.0% 0/147 0.0% 28782460 NA +6595 chr4 + 190214555 56343555 56343554 56343706 152 TGCCTACAGGATTTACAGCCAGTAAAAGTCCTCCCAATGTAGCAAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTT---CCTCCACATTTTGACTTCCAAACACACTTCTTTCTCTGCAAATAAGAAAACAAATTA chr4 - 94230402 27561723 27561722 27561877 66668526 66668525 66668680 155 TACATACCGGGTTGACAGCCAGTAACAGTCCTCCTAGCGTAGCAACATAAACATGATGAGGAAAAGAGCTTATACAAGGAGATGAAAACACAGCTCCACCTTCACAATGCAATTTCCATACACACATCTTTTCCTGTAAGAACAACAAAAATTTA .:.x...x..:..x...........x........:.::.......x...x.x......x....xx::.:.:.x...x.....x.....x....:.---...:....x.x::.:.....x......x.....::...:..:x.x:.x..x..x... 95M3I57M 110/152 72.4% 155/94230402 0.0% 3/152 2.0% 28781832 NA +9766 chr4 + 190214555 56345120 56345119 56345311 192 TCCTTACATAAATATCTAAAGCATATGCGTGCTGGTCATGAGATCCAATGTAAATGAGTCCTGTGGTTGGATCCATGGTTGCCGAGCTTTTGACAGCATCTTCAGTAGTAAACATCCAGTATTTTTCTCCACTATTACTTTTCAGAACATAAACTAATCCATTATAACAGCCTACCAAGAAACAAAGCACAA chr4 - 94230402 27562405 27562404 27562595 66667808 66667807 66667998 191 TTCTTACATAAATATCCAAAGCATACATATGTTGGTCATGTGATCCTATGTAGACTAGTCCACTGGAAGGATCTACCACTGCAGAGCTTTTCACAGTGTCTTCTGTGGCAAAAGTCCAGTATGCTTCTCCATCGCTGCTTTGGAGCACATACACTAAGCCATCATAACAACCTG-TAGGACACAAAACACAA .:..............:........::::..:........x.....x.....:.:x.....xx...xx.....:.:x::...x........x....::.....x..:.:...x:........x:.......::::.:....xx..x.....x.....x....:......:...:-:.:..x.....:..... 174M1D17M 142/191 74.3% 191/94230402 0.0% 1/191 0.5% 28782715 NA +21050 chr4 + 190214555 56349254 56349253 56350107 854 AAAACTTACCCACCACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCTGTTCCCATTTTACCTTCCCAGAGTAAAAGTCAACTGCCTTCATTCTATGAGAATGGGAACCAATGTACACAGTTGTAGATGACTTATCAAAAGTGGGTATTACAACCAGCGGTGAAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCA--TTTTCTGAGTCCCTATCGCAGGTTTCCCCTCTTCAGAAACTTTTGCAACACAG-------GATGGATCTTTTGACTTCCCAATAAGAACTGGAGAATTTAAG-----CCTTTCA-AATTTTGAATGTTG--GTCTGTGAAACT--GAGTC----------AGAAGGACAG--GCTGAAG----------------AGCAATGTCCTA----ACTTTGTTAAAAACCTAGTGGAATTCAGAGACAAAATTTGACTCCCTCTGCTCAGTACAACAAAAG-CATTAATCTCATTGTGGCAAGTGAAAGTCATGATGGCTTTCTGATGTAA-------AGATGTTCCACTGGCTTCCTCTTGATTAATGTCGCTGAGTTTCCTTTTTGTGGCACAACTCTTCCTGAATGTCACATCTTCATCTGGAACCACTGTTTGAAGGATGTGATTATAAATCTCTAAAATGGAACTGCTGAGAATAATTTCCAGAAGCCCAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTACAGATGAGAGAATAGAGAAATATGTGACGTAAAGGTCTAAAAGCAA chr4 - 94230402 27563374 27563373 27564259 66666144 66666143 66667029 886 AAGACATACCGACAACAATGAAATTTCCACACTTAGATACGCAGGCAGAAGATTCAATACGATCTCCAAGCTTCTTCTCCCATTTTACTTCTCCTGTATCTAGATCAATAGCCTGCATTGCATGAGAGTGAGAGCCAACAAATACAGACGCAGATTCCTCATCTTTAGATGATATTACAATCAGTGGTGATGCATCAACACATCTTCTTGTATTTGACTTCCATCTCATGCGCAATGCCAAGTCTGCTG-----TTGTTACATGACTACATTCTGCACAGG--TTTGCTGCACAGAGCAGCAGTCAGTTTTATTTACTT--CGTTGGTAATTGTTAAAGTTCTGTTCTCCTTTTCATACCCTTGCACGTGGCTTTTTGTTATACTTGGAGTCACAGCATGCAAGAAGGATGGTTGTTGTAGTGACTCCCCTCCCACCTGTACTGTACTACTGGGTTGTATAAAAGACTTGGTAAAGTTCATAGAAAAAAAATGATTTCCTCTGCTCAGTGCTATAAATGATATTAATC---CTGGAGCAACC-----TTAAGATATCCTTCAGATTTCAGTTTAGCATATTTTCTGTGAATTTCCTCTCCATTGTTTTTACTTAGTTTTCTTTTCAAAACACTGTCATCATTTATTAGCTGGTCTTCATCCGGAAACAGAGTTTTAAGAATATGCTTATAAACCTCCTCAATCGAGCGGCTGAGAATAACTTCAAGGAGCCCAGGCACACCTCTGCCTACCAGCATCTCAATTTCATCATAAAATTGTAGAGCTTTTAAGGAGTCTCCACCACTGTACAAAAATACCGCATCTTTAGAAATTCCACTTGAATCGCCTAGGAGACCCAGAACGACCTA-----GAGAAAAGAAGGAAA-----GAGAGAACGGTCCATAAGTAA ..:..x....x..x.....:..:.................:..x..x..:........x........x.:xx...x:...........:.::..x.x:.xx.::....:x....x....x:......:..:..:....::x.:....x:.:....xx..:...xxx..xx.:........:...:.....x.....x......:.x.:...:.:....:....:....:::.:..:x...--.:.x...-----:.:.::..x.x:.x.x:...x..x.::--.....x:.....-------.x::.x.:.x..x....--.:x.::x..:..xx:..x..xx.-----.:.....-.x::...x.:..x.--x.:...x.x...--.....----------.......::.--.:..x..----------------x.:.x...x...----::.x.:.x...:..:.:..::.:....x...x....xx...:.:............:.x.:...x.-:.......---:..x:....x:-----.:.x...:x.:...x...x.x.-------.x..x...:::x:::.......:x...:x.x.::..x.....:.....::x::...x:::x.:x:.x.x.:x.xx:........:....x..xx....x...:..:..x.......:...:xx...x..:.x...........:...x..:........:..xxx.x.:..x..x..:x.:.....:...:::x::.:::.x.x:.x:........:...........:.x:..:..x.x:.xx..x.:..:..::.:xxxx::...x:..:.....::....::::x...-----....:..x.::....-----..x:x..x....:.x...:.. 240M2I7M5D27M2D12M7I17M2D23M5I7M1I14M2I12M2I5M10I10M2I7M16I12M4I66M1I8M3D11M5D22M7I291M5D15M5D21M 543/827 65.7% 886/94230402 0.0% 86/827 10.4% 28785880 NA +4133 chr4 + 190214555 56352469 56352468 56352549 81 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATCCTCCCACCTCAGCCTTCCAAGTAGCTGGGACTACAGGCGTGCACCACTG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG ..:..:..:xx:x..:...........:.x.:.x.xx:x.........:...........:......--............ 67M2D12M 61/79 77.2% 79/94230402 0.0% 2/79 2.5% 38155343 NA +9241 chr4 + 190214555 56353390 56353389 56353612 223 TTAAATTAC--TTTACCGTGGGATGTAAATGGTAGAGAGTCGATCAATACAAGCTCATCCGGGACTGCATGACTTGGAAGATATTTCTGCAGTTCTTTAAAGATGTATTCTTTTACTGAAGCATCTTTAGACACCATGAAGAGAATTAATTTTTCCTGATTATACCATGTAACTGCACAAGACTCCACTTGCTGAAGCTCTTCAGCAACCTATAAGAGAGATTAT chr4 - 94230402 27566474 27566473 27566698 66663705 66663704 66663929 225 TTAAAGTATCATTTACCGTGTGATGTTAAAGGCAAAGCTTTAATCTGTACAAGCTCATCAGGAATTCCATGAGTTGGCAGACGTTTCTGGAGCTCGTGAAGAGTTTCTCTCTCTTCTAGATCACCCCTGGGAACCACAAATAGGATAAGTTTTTCCTGCTGATACCAGGTCACTGCACAAGCTTCTACCTGACAAAGATCTTCAGCAGCCTGTAATTAAAAGTAT .....x..:--.........x.....x..x..:.:..xx.::...x:............x..:.:.x.....x....x...::......x..:..x.x..:::.x.x.:::.:.x..::.x..:.::.:.:x....::..x..:..x.:.........x.x......x..x..........x:..:..:..x::...x.........:...:...xx:.:.x... 9M2I214M 154/223 69.1% 225/94230402 0.0% 2/223 0.9% 28786916 NA +14303 chr4 + 190214555 56354033 56354032 56354869 837 TTCTACCTGTTGCACAAGTTCAATGTTAAGACGTTTGCCATGACGTTTGATCTGACTGTCTTTTCGTCCCAAAAAAAAAATCTCTCCATCTTTCACAGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTGGTACTGTCACTTCATCATCAAGAAAACACACTCTGTTTCTGCCACCTTCCCAAGATATAAACACCAATGTCATAAAAATCCAAGGGAAATATATTAA--AAACCATAAAATCAACA---------TCTCCAAAAGT------TCAGTGACTAAACTTCAAAATT-TAAATATTAAAAGATGGGCTCATTTTAAAATGTTATCTGATAAAATCAGACACAATAAGTTCAGTAAATAAGCAGAGATAAAATGAAATTTATTTCTTAAAATTTATGGAATTAAAAAAATTCTTAGACTACTGATTAAATATAATTTTGGCTATAAATATAAATATGAAGGTCCAAGTTACAGTCTCTAAATTACTTTTATTAATGTGTTAGACATTATTATCTGAAATAATTATTGTAACATTTGGTATTTCATGACTATATGAATGAGAATAAAAATTATCACTGAAA-------AGCATGAGATAGACA--AAAGAAAAAGACGAAAGGAATAAAATTAACACATCA---------------GATCATTTTTCTTGAAAAAAAAATTCCCAATCAACAAATATAAAACAACCTAAAAATACTTGGCCACTGCCTTCCTGAATTGTGAAGCCATTAGTATCTCTGACTTCAACTACTGTTCCAAGAAGTGGAAATCCCAGTTGTACAGGCAATTCACATCTATGAAAATAAGATACAGAGCAGATTTAAAATTTTTCATT--TGAATAGAATATTTTCC chr4 - 94230402 27567684 27567683 27568460 66661943 66661942 66662719 777 TCTTACCTGCTGCAAACATTCCATATTAAAACGCTTGCCATGACGTTTGATCTGATTGTCTTTCCGACCCAAAAAGAATATCTCTGCATTCTGCACTCTTACAAAATCCCCTGTTGCTCTCATTGTGCCCTGTGGAACAATTATCTCATCGTCAAGAAAGCAGATTCGTTCTTCACCACCT-------ATAAAGAAAAGATTGTGGTCATTATTAAATGTCTATCTGTAAATGAAGTAATGAATGGAATACTAAGTATTTTATCAGAAGTTTCTTATCAGTGTCTTAACTTCTACACTGTACAAATTAGGCAGTAGGTTTAATTGAA----TTAATACATATAAACTACTTCAGCTGACTCACAATGCAAGCAGGAAAAAAAAAAAA-------------------AGAATCAGTA---------------TAATGAAACCTGTCTGCAGCTA---------------------AAGTGGTGATC-----ATTTCCTAT----------------TCATCATTCCAACAAGCTAAAATACCATCAGAAGGTCCCTGGCCC----AATGGGAATTTACAGTGTTACTCCAACCTGTTTAGCA-GAGGCAGGCACCAAGAAAACAAACAAACAAACAAAGCCCAACACATTACTAAAACTCAACTAGGAAAAATATCTTAGAAGaataaa---------aaaaaatataaaataaCCTATAAATATTTGTCCCTCGCCTTCTAGAACTGCAGAACCATTGGCATCTCTGATCTCAACCGTTGTTCCAAGGAGTGGTGATCCCAAAGGGACAGGGAAATCACTCCTAAATATATTAAGAGAGAAACAG---TAAAATCTTTCCTTTCTGAATACAAATCTTTCC .::......:....x.x:...x..:....:...:.....................:.......:..x........:..x......x...::.x...xx.:.....:..:.....x....x.........xx....x..x:.:.::.....:........:..x.:..xx.:.:::......-------...x.:.x.xx.x...x:.x.xx..:x..x.xxx..x.:.x..--..::x..:..xxx..:.---------.:x:..:....------......x..x......x.x.:.-..x.x....::x::.:..:.:.x..x..----...x:xx...x..x.x:x:x..::x:::...xx.x::......::.x....x:...-------------------:....:.:x.---------------.:..x...:x.:x:.x::....---------------------....x::::..-----...x.:.x.----------------.:..:..::x..xx.::..xx:..x...:x.:x:x.:.x..:.:x----....:....xx.x.x.:.:...xx..-------....-...::..:..--..::...x.:..:..x::.xx..:x::.......:.---------------..xx.x.x.::.x...:..x...---------..x..........:......x.....:...x..x::......:x...:..:::.:.....:.:........::.....:::.........:.....x:......:xx.x.....x..x....x:...x:x.x..x.::x:x::.:...---......:....x..--......x..xx:..... 181M7D43M2I17M9I11M6I22M1I28M4D56M19D10M15D22M21D11M5D9M16D45M4D26M7I4M1D10M2I36M15I23M9D148M3D14M2I17M 479/733 65.3% 777/94230402 0.0% 148/733 20.2% 28786349 NA +11662 chr4 + 190214555 56355169 56355168 56355444 276 TGAAAACCCTTACTTGAGAGTAGAGTTAAGAGTCTTCTCTGGAATCCTATAAATGGTCGCCCAACTTGATACCTCTGTGATACCATAAACATTAAATATTTGTGTTTTATTGCCTTCTCCTCTCCAGCTTCTGAGAACTGTCAATGATGGAAACGCTTCACCACCAAGGGCTAATACTCGAAGAGAAGTAGTGGCTGACAAAACAGTTGACTTGATAAGCTGAGATCCAAATCTTCTAAGCAATGTTGGTGTTGCCTGTA-GATACA---TTAAAAATAA chr4 - 94230402 27571366 27571365 27571645 66658758 66658757 66659037 280 TGAAATTTCCTACCTAAAATCAGCACTAAAAGCCTCTTCAGGAATCCTGTAGCAAGTGGCCCAGCTTGAAACCTCAGTTATACCATACAAATTAAAAATACTTGTTTTGTTCTCCTTGTGCTTCCAACTCTTCCAGAGATTCAGTACGGGAAAGGCTTCACCACCAAGGGCTAAGACTCGGAGCGAAGTGTTTGCAGACAATACTGTTGATTTAATTATGTGAGCTCCAAATCTTCTGAGAAGTGTTGGTGTTGCCTAGATGATACATATTCAAAAACAA .....x::.:...:.:.:.x:..x::...:..:..::..x........:..:xx:..x.....:.....x.....x..x........x.x......x..x:x......:..x:.:.:x:x::....:..::.xx::.xxx...:.:xx.....x....................x.....:..x.....:x.x..x.....x..x.....:..:..x.xx....x............:..x.:..............:x.-......---.:.....:.. 260M1I6M3I10M 196/276 71.0% 280/94230402 0.0% 4/276 1.4% 28783803 NA +3076 chr4 + 190214555 56355592 56355591 56355636 45 TGTTTTTTTTTTTTTTTTTTTTTTGGTTTTGTTTGTTTGTTTTTT chr4 - 94230402 23073757 23073756 23073801 71156602 71156601 71156646 45 TGTTCTTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTT ....:......:.x....x....xx.................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 33281835 NA +3187 chr4 + 190214555 56355607 56355606 56355658 52 TTTTTTTTTGGTTTTGTTTGTTTGTTTTTTGAGACAGGGTCTCACTCTGTTG chr4 - 94230402 50147695 50147694 50147746 44082657 44082656 44082708 52 TTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCTTCTG .........x....................xx.....::x.:...:..x:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 6207912 NA +8861 chr4 + 190214555 56371392 56371391 56371662 271 TAAAACACTTAA--AATATTGAAAAATGATAAACAAAACGTTCATTGCTACTAAAATGT-----ACCTGCAAAACAGTCACTCTATGATGGGAAAAGAGAACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTGATAGAGCAAGAAATATTTCCACAACAGAAGGATCGAAGGTCAGAGGTGAAGCCAGAAACAAAACATCTTCTTGTGTGATGTCAAAAAGTACCCTAAGGCAAAACAGAATGC chr4 - 94230402 27572816 27572815 27573085 66657318 66657317 66657587 270 TAACACACATGAGCAAAAGTGAGAAGTGAGAGACAGAAA----ACAGTCACTCAGGTGTTGCCTACCTGCAACACTGTCACATGGTGATGGTTAAACAGGGCAGTAGACAGCTCCACAGGCATCATTTTAACAGCATTTGGTACTATGAGAATAGAGGCTCCACTTGTCAGAGCAATGAACAGTTCGACCACAGATGGGTCAAACGTTAAAGGAGAAGCCAGGAACAGCACATCATCCTGGGTGATCTCAAAAATTGATCTA----AAAACAGAAAGC ...x....x.:.--..x.x...:..:...x.:...:..x----.:x.::...x.::...-----........x..x.....x:x:......xx...x..::.:x.:.x:.::.:::xx..x.x..x:..:..:.x.x.......x..:..x.x......x.......x:.......x:..:.x...x..x.....x..:..:..x..:.:...x........:....:x.....x..:..x.....x.......x.:x:...----.........x.. 12M2I25M4D16M5I198M4D12M 182/263 69.2% 270/94230402 0.0% 15/263 5.7% 28798576 NA +3053 chr4 + 190214555 56377880 56377879 56377951 72 CTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCCAGTACCTGGTATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:...........::x...x.xx.x........:..x....x....x.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 38180754 NA +9407 chr4 + 190214555 56378102 56378101 56378437 336 GGCCTAAAATATAGATTCTG-AGAAAGAGTCAAAG-----ACTAGAA------CTTACCGAAAATGCTGGATATTTGGTACTATACACTTATGAGGCACTCTGACAATCTTCGGTATCCCTGTAGTCCCTGATGTATGTAGAACATAGGCTAAGCAATGCTTTAGCCTCAGATCCATGTGTTCTTCTGCT--TTTTCTTCATT-GACATGCTCAGAACTTATGCTTTTT---------------------ATTTTTTCTTTTTCATATTTCTCTTTTCCATCATTTAGCATCAAGTTCACCTCAGTATTTTTCCAGTGAAGTCTGAAGAGCACTAGGTCATTATGTTCCACTGTAAATGTATCATAGTTCAA chr4 - 94230402 27573657 27573656 27574028 66656375 66656374 66656746 372 GACCCCAAATATCAAATTTGTAGAAACATTTAAAGGAAAAACCAGAAACCACACTTACTTAAGATGCTGAATATTTGGCACTATACATGTATGAGGCACTCTGACTACTTTGGGGGTCCCTGTAGTTCCTGATGTATGCAAGACGTATGCTAAAGAGCATCTCTGGCCAACATCCCTGTATCCTCCTTCTGATGTTTTTAATTCGAGATGCTCTGGGCAGACAGTATTTCTGAGCTGTGAGTTACCCATAACTTTGAAAGCTTCAAGTTTACTTTTCACATTGTCTGCTTGCAAATTAACATCAGTACTGCTCCGGCTCATATGGAAGAGAGTTAAACCAATATGTTCCACTGTGGAAGAACTGTGGGACAA .:..:x......x:.x.:..-.....x.x.:....-----..:....------.....:x..:......:........:........:x................x.::..x..x:..........:...........:.::..:..x.....:x.:::::.:x.x.:x.x....x...:.:..:..x..--.x..:..x...-..x......x.::.xx.::x.x...---------------------.:...xxxxx:....x:...x::...:x...::.:.:x:xx...:..x..x......:.x:...:.:xx.xx:x......x::..:::..x.............::.x.x.:::.:.xx... 20M1I14M5I7M6I137M2I11M1I25M21I122M 222/336 66.1% 372/94230402 0.0% 36/336 10.7% 28804445 NA +3338 chr4 + 190214555 56379209 56379208 56379286 78 CTGCAACCTCGAACAGCTGGGCTCAAGCGATCTTCCCACCTCAGCCTCTTGAGTAGCTGGAACTACAGGTGTGCACCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:..:..:x:.:.xx.....:.....:.x.::x.xx:x........:.::................--:........ 67M2D9M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 38182083 NA +10083 chr4 + 190214555 56383995 56383994 56384302 308 AACTTGCAATATACTCTATTAAAAATTTACATTAGCTTGGAGTAACATCAAATTTACAGTTCTAAAAAATATTACCCTAAAATCCAAGAGGGTAAGTCTATCCCAGGTTGGCAGTAGAGACCAATTTCCCGAATTCCTTGAAAGTCACAGTGTAACAGCAGAAAATTTGATAATTCAGAAGCAGCATTAACCACAGTCTTGTAGGTGTAGTAAACTGGAAGCTGGTTGTTGCATTCATCAAAACATACAGCTACTCTGTCCATATAACAGGAGGCAGCCTTATGCACCAATTCCTGAAGAGTCATTTC chr4 - 94230402 27576845 27576844 27577149 66653254 66653253 66653558 305 AACTTGCAGTTTGCTTTAATGGAGATGATCATTAAA--AATACAACACAGAATGCA-GGCATTCTAAATCATTACCCTAAGATCCAGGATGGTAAGTTTATTCCAGGACAGCAGTAAAGGCCTATTTCACACCTTCCTTGAGGATCACAGTACTTCTGAAGGAAAGCTGTTAACTCCGTGGCATGTTTAATCACTGTTGCATACGTGTAGAAAGTTGGAGGTCCATCATTGCATTCATCAAACCAAACAGCTTTTCTACCTGAATGCAGGCTGGCCGCCTGAGCCACCATATCATGGAGAGTCATCTC ........:.x.:..:..x.::.:..xxx.....:x--::x::....:x:...x:.-:.:x:.xx...x:..........:.....:..x.......:...:.....x::......:..:..x.....x.:xx........:::.......::xx.x.x..:...x:..x...:..x.x:...xxx....:...x..:x::..x......x..::....:.::x:.::..............x..x......x:...::.::x..:xx:.xx...x....x.xx.....xx..x..:........:.. 36M2D18M1D251M 198/305 64.9% 305/94230402 0.0% 3/305 1.0% 28807150 NA +8757 chr4 + 190214555 56395324 56395323 56395557 234 TGAAACTACACACATCCAACCCTACCAGCTACCATTCTAATTCTACAGGATATTTTCCAGTGAGACAAGCTGTACAATGACCACTCTTTTCAAAACATTCCAGACCATTTCCATTTTCTTGGATCATAATATCGTGCTTTTTCTCTTTCTGTTTTTTAAACTTTATCCCTTCTTGTACAGATGAAACCAGTCCTTCTACTGACAGATACACAACACTGTTTGCTCCTAAAGAAA chr4 - 94230402 27582115 27582114 27582325 66648078 66648077 66648288 211 TGAACCAATGTCCATCCA--CTAAACATTCACCATTCTAGCTCTACAGGATAATCTCCAGTGAGACATGCTGTGCAATGACCAATCTTTCCAACAC-------GCGATTTC--------TGGGTCTTAA------GGCTGTTCTCGTTCTCTTTTCTTGCTTTGATGCTTTCTTGCACAGACGATACGAGCCCTTCCACAGAAAGATAAACAACACTGTCGGCCCCTACAGGAA ....x.x.:::x......--.:x.x..x::.........::...........x.:............x.....:.........x.....:...x..-------:.x.....--------...:..x...------.x:.x.....x....x....:.x:x:..x..x.:......:.....:..x..x..:.....:..x..x.....x..........:x..:....x..:.. 18M2D76M7D8M8D10M6D99M 159/211 75.4% 211/94230402 0.0% 23/211 10.9% 28813209 NA +8148 chr4 + 190214555 56396584 56396583 56396829 246 TAATAATCAAAGTTTATAGAAATTTTAATACTTACCTAGATATTCTGCAAGGTGATCAAATTCTGGTTTATTGGCAATGAGCTCTTCTTTTGTAGGAATGTTTATTCCCATGAAGCATGGATATTTAATTGGTGGTGAAGCTACTCGAATGTGTACCTTGGAAAGAAATCATTGCACACAAGGTTTTTAAGACTATGCAAAATTCTTTCATTGTGCAAATACAATACAAAATTGTTTTGCAGAATA chr4 - 94230402 27583494 27583493 27583715 66646688 66646687 66646909 222 TGAAAACCATCTTTCAAAGAAACCCCA-CATTTACCTATATAGTTCGCAAGATCATGAAATTCAGGTCTGTTGGCAATAAGTTCTTCTTTTGTTGGAATGTTTATTCCCATATAACATGGAAATCTTATGGGAGGTGAAGCCACACGAATATGCACCT--GAACAAAA-------ACACAA---TTTCAAAACAGTGC--TATGAGTCCAATATCTAAGTCCAA---------GTTCTGCAAAATA .:.x..:..xxx..:.x.....::::.-:.:.......x...x.::.....:.x..x......x...:.:........:..:...........x.................:x.:......x..:.x..x..x........:..x.....:..:....--...x:...-------......---...:..:..x:...--x..xxx.:..x.:.x:..:.x...---------...:....:.... 27M1D130M2D8M7D6M3D14M2D24M9D13M 164/222 73.9% 222/94230402 0.0% 24/222 10.8% 28813090 NA +15115 chr4 + 190214555 56399173 56399172 56399556 384 ACTTACCTCTTTTGCACCAGATTCTTTGAGCAGTTTTATTATAGGTGAGATGGTATTGCCTCTGACAATTGAATCATCTACAAGAACAATTCTTTTGCCTTTAAAGTTGTCTGACAATACTCCAAATTTTTTTGCAACACCAAGTTGTCTTAACCTCATGTTTGGCTGAATGAAGGTTCTCCCTACATACCGGTTTTTACACAGCACCTCCACATATGGAAGTCCACACTG-ATAGAGAAGAAATGAAA---GGATAATGAGGAGTAATATACAGAATAGGCAAATATTTTCTCTAGGTTGTGTTGCC--------GCCACAATATTCAAGTAAAATTTCAAAATAATT--------------TTCCTTTATTATTTGGAAAAAAGGCAAAAAGAAAAACCACTAAACAA chr4 - 94230402 27584393 27584392 27584777 66645626 66645625 66646010 385 ACTTACCTCTTTAGCTCCTGATTCCCTTAGTAGTTTTATTATGGGAGAAATAGTATTGCCCCTCACAATTGAATCATCAATGATAACAACTCGTTTGCCTTTAAAATTGTCAGATAGAACACCAAACTTCTTTGCAACACCAAGTTGCCGTAACCTCATATTTGGCTGGATAAAAGTTCTTCCTACATAGCGATTTTTACAGAGTACTTCAACGTATGGCAGTCCACACTACAAACAGGAGACATTAAACAGAGTTAGTG--------TCTACAGAACTGG-------TTATTCTCAGTTACTGTGCTTTAAAGAAACCTTAGGATTC-AGTATGACTTCACAATAACCAAAAATCTTTGAAATACCTTAATACAGTGGAATAATGACAAAA---------ACTAAACAA ............x..x..x.....::.x..:...........:..x..:..:........:..x..............x.::.x.....:..x............:.....x..:.:x..x.....:..:.................:.x.........:........:..:..:.....:........x..:........x..:..:..x..:.....x..........:-.x.x..:...x..x...---:.x..:..--------.x.......:x..-------..x:...x:...::xx...:--------:..x:.:x....-....x:.:....x.....::--------------.x....x..xxxx.....x..x.:.....---------......... 231M1I17M3I8M8D13M7D20M8I12M1D20M14I29M9D9M 276/359 76.9% 385/94230402 0.0% 51/359 14.2% 28814780 NA +7560 chr4 + 190214555 56400768 56400767 56400913 146 AATTAAGAGAAAATACCTTTCCTGCGTAAGCAAGAGCAGCAGGCGTAGCAGATTCTGGAACAGTGCTAACCAAATCTGCATCCACAGGTGCTTCAATCGCTAGCTGCTGGCCACAACGGTATCTTACTGTATAAACCATTTGGTCT chr4 - 94230402 27584885 27584884 27585027 66645376 66645375 66645518 143 AATTAACACAAA---CCTTTTGAGCGTAACCCAGAGCTGCTGGGGTTGCAGACTCTGGAACAGTGCTGACCAGGTCTGCCTCCACAGGTGCTTCAATAGCAAGTTGCTGGCCACATCTCCTCCTGACTGAATACACCATTTGACCT ......x.x...---.....:xx......x.x.....x..x..x..x.....:..............:....::.....x.................x..x..:...........x.xx:x:..x....x...x........::.. 12M3D131M 113/143 79.0% 143/94230402 0.0% 3/143 2.1% 28815883 NA +10620 chr4 + 190214555 56401320 56401319 56401493 174 ATCTACTTACCTTCGAACATACTGTCTGGTCTTGCAAAATAAACATATTCAAAGATACAAAAAGCCACTGGGTTTCCTTCAGACCTTGATATAATATCAAGAGTTTGGACATTGTGTCTGGATATTTCCACAATTTCTCCAGGCAAGACTTCACGGTAATATCTTGGGAAACAA chr4 - 94230402 27586155 27586154 27586328 66644075 66644074 66644248 174 ATCTTCTCACCTTCAAAGATACTGTCTGGTCTTGCAAAATAAACATATTCGAAGATGCAGAATGCTGATGGATCTCCTTCTGGTCTTGGTACAACATCCAATGTTTGGACATCATACCTGGATATTTTCACAATCTCTCCAGGAAGTACCTCACGATAGTACCTTGAAAGAGAA ....x..:......:..x................................:.....:..:..x..::x...:.:......x.::....:..:..:...x.:x..........::.::..........:......:........x.:x..:.....:..:..:....::.:.x.. 174M 135/174 77.6% 174/94230402 0.0% 0/174 0.0% 28815165 NA +5323 chr4 + 190214555 56402100 56402099 56402227 128 AAAACTTACCTTGCACCAATAGATAAGAAGCTACAAGATTCTGAAGACACCACCCATCCTTCTGTTTCTGATGTTTTTTTCTCTGTAAATCACAAATCAATTCAATTA---ATGGATTCCAGAAATTTTAA chr4 - 94230402 27587084 27587083 27587211 66643192 66643191 66643319 128 AACACTTACTCGGCACCAATAGATAAAAAGCTACAGGATTCAGAAGAGACCACCCATCCTTCTGTCTC-ACTGTTATCTTTTCCTGAAATAAAAAG--ATTTCTGTTATAGTTAGATTCCACCATTTTTGA ..x......::x..............:........:.....x.....x.................:..-:x....x.:..:..:xx....x.x..:--.x...x:...---x.:.......xx.x....:. 68M1D27M2D10M3I20M 96/125 76.8% 128/94230402 0.0% 6/125 4.8% 28815016 NA +14183 chr4 + 190214555 56403036 56403035 56403419 384 TTACCTTTGTCATTTATATCAGACACTGGAATAAGACGACCAATGCATAAGGGACGATTTCCATAAGGATCTCGTACTGCATAAATAACATCTCTGTGCATTATAAGCAGGGAGTATGCTGTGGGTGCTTCCTTCATCAAGTTTTTAATCCTGGAATTAATTAAATAATTGAATGAATAACTTCAGTTATAAACATATG--------CAAGGCAAAA--------CTCTCCTTACT----AGAGCTCTAAGTTTAGTCCAGTTCTCTGCTTACCTGGCTACCCAGTCTGGGGTGTCATCTTGTTCCTGAGGAGGGGTATACGCCAGTAACTGGGTAATCATTTCACTATCAGAACTTGTAGACAGACCAATACCATGACGCAGAAGCTATATAGA-------AAAAAAGAG chr4 - 94230402 27588195 27588194 27588573 66641830 66641829 66642208 379 TTACCTTTTCCATTTATGTCCCCTACTGGAATAAGGCGACCAATGCAGAGTGGGCGATTCCCATATGGATCACGTACTGCATAGATTATGTCTTTGTGCATAATTAGCAATGAGTATGAAGTTGGAGTTTCGTTCATTAAATTTTTAATTCTGCAATGAG--ACATAGGTGAA--------------CATAATCATGTGTTGCACACCATGGTGAGAACAGACTGCTGTTCTTGCTTCTGAAACCTGTAA----------------TCCTCACCTTGCTACCCAGTCAGCAGTGTCGTCATTTTCTAGAGGAGGTGTGAAAGCCAGCAGCTGGGTGATCAATTCACTGTCAGAACTGGTTGACAATCCTACACCATGCCGCATAAGCTTTGAAGACACACACAAAAAAGGG ........x:.......:..xxx:...........:...........x.:x..:.....:.....x.....x...........:..x.::...:.......x..x....:x.......xx..x..x.:...x.....:..:........:...x...x.:--.x...:x....--------------:....x...:..--------..x..::.:.--------..x.:...:..----.:.x..x...----------------.x..:....x...........x.x:.....:..x.x...:x.......x..:x.x.....:.:......:....x......:........x..x....:x..x.:......x....x.....x.:x...-------.......:. 160M2D11M14D12M8I10M8I11M4I10M16D129M7I9M 268/352 76.1% 379/94230402 0.0% 59/352 16.8% 28814841 NA +12956 chr4 + 190214555 56406493 56406492 56406717 225 ACCTTTTTCCTTAATCGAGCAGCATTTACCAATTCGCCATTATGTGCCACAGCTATCTTCCCATGAAGTGTTTCAACAACGAAGGGCTGACAATTTTCTAGTTCACATTTTCCTGTGGTGGCATACCTGGTGTGTCCAATTCCAAGATTTGAAACATATAATTTTTTCAAATTGTCTTCAGTAAAGACGTGATTTACAAGACCCATTCCCTT---GAGAAATCAAAAA chr4 - 94230402 27589831 27589830 27590058 66640345 66640344 66640572 228 ACCTTCCTCCTCAGTCGTACAGCGTTTGTTAGTTCCCCATTGTGTGCCACAGCTATCTTTCCATGAAGAGTTTCTACAACGAAAGGCTGGCAGTTCTGCAGCTCAGAGATCCCCGAGGTAGAGTACCTGGTGTGCCCGATACCAAGGTTTGAAACATACAGCTTCTTCAGGCTGTCTGCATTGAACACGTGATTTATAAGACCCATTCCCTTCAGGAGAAAAGGAAAA .....::....:.:...x:....:...:::.:...x.....:.................:........x.....x........:.....:..:..:.x:..:...x.xx.:..:.x...:.x:...........:..:..x.....:...........:.::..:....:::.....x..x.:..x..........:...............---......xx:.... 212M3I13M 174/225 77.3% 228/94230402 0.0% 3/225 1.3% 28816662 NA +4707 chr4 + 190214555 56407604 56407603 56407736 133 CACCGCACTTGGTCTGTCATCAACATTTCTTAAAGTTCAAATT-TACCTTGTGTGATTTGAATGTTGGCACCGAACTCCCATCACTAGTCACAATACCAGCACTCTCCTGACCCCTGTG-----AATATAAAAAGATAT chr4 - 94230402 27592162 27592161 27592291 66638112 66638111 66638241 130 CATCTCACTTGGGC----ATCTACAA-----AACATTTACATTCTACCTTGTGCACTTTGAATGCCTGGGATGACTCTCCATCACTTGTCACAATTCCAGCACTCTCCTGGCCCCTGTGGACAAAATACAAATAAACAT ..:.x.......x.----...x...x-----..x:..:.x...-.........::x........::x.x:x:..x:::........x........x..............:........-----....:...x.:.:.. 14M4D8M5D12M1I75M5I15M 94/124 75.8% 130/94230402 0.0% 15/124 12.1% 28815442 NA +26350 chr4 + 190214555 56410429 56410428 56410903 475 CGGAGCTTATTGACAACCAGCCATGTGGTTTCCTAGGAAACAAAACCTTGGCTGGAAATAGTGAATCATTTCCAGGTCACTTTCAACATGGAGAGTGGAGCAGGAAAGCACTGGACTGAGGAGGAGGTTAAAGCTTTGCTAAGTGTCTGGGCAGAAAAAAATATACGAAAACAACTTTATGGAACACTAAGAAATAAAGGAATATTTATTTACATTGCTAAAAGGCTGCAATCATTAGGAGTATACAGAGACTGGAAACAGTGCTGGGCTAAGTACAAAAATCTCAAATATGAATATAGAACAGTTAAATATGCCCATAACTCTGGAGACAGCTCTAAAACTATGAAGTTCTTCCATGATTTGGATGTAATCCTGCAGTATGAACCTGCCACACAATTTACAGAGGAAGATGCAAATGGCAGGTACCT---------GGAAACGCTCAGCCCAAGTACAGCCCCAGAGACCACTGAAGGTAAAA chr4 - 94230402 27594335 27594334 27594811 66635592 66635591 66636068 477 CGGAGCC-GCTGAGAAGCAGGCGCCTGGTTGCCTAGGGAACCAGATCTTGGCTAGAAATAGTGAATCATTTCCAGGTCACTCTCAACATGGAGAGTGGAGCGGGGAAGCACTGGACTGAGGAGGAGGTTAAAGCCTTGCTAAGCATCTGGTCGGAGAAGAGCATCAGGAAGCAGCTCCACGGCACCCTGAGGAATAAAGGAATATTCATCTACATTGCCAAAAGGCTGCAGGAGTTAGGAGTTTGTAGAGATTGGAAACAGTGCCGGGCAAAGTACAAAAACCTGAAGTATGAATACAGAACGGTTAAATACGCCCGCAACTCCGGGGACGCCACTAAAACTATGAAGTTTTTTCACGACCTGGATGCCATACTGCGATGCGAACCTGTCGCACACTTGGCCGAGGG------GAACGGCAGGTGCTCCTCCACCGAGGCGCGGCTCAACGCCAGCCCCACCGCAGACAGCAGCCAAGGTAAAA ......:-::...x..x...x.::x.....x......:...x.:.:.......:...........................:...................:..:.............................:........::.....x.:..:..:.::..xx.:..:..:..::.:..x..x..:..:..............:..:........:...........:xx:........x.::.....:............:....x...........:..x..:........:.....:........:....::.....:..:...:x.x................:..:..:..::......:x..x....::.::.......:.:....x..x:.x....:------:..:.......:.::---------..x:xx.....:.x.x..:x.x:..x....x.x..x:x......... 7M1D399M6D15M9I47M 362/468 77.4% 477/94230402 0.0% 16/468 3.4% 28816094 NA +9573 chr4 + 190214555 56410474 56410473 56410731 258 CCTTGGCTGGAAATAGTGAATCATTTCCAGGTCACTTTCAACATGGAGAGTGGAGCAGGAAAGCACTGGACTGAGGAGGAGGTTAAAGCTTTGCTAAGTGTCTGGGCAGAAAAAAATATACGAAAACAACTTTATGGAACACTAAGAAATAAAGGAATATTTATTTACATTGCTAAAAGGCTGCAATCATTAGGAGTATACAGAGACTGGAAACAGTGCTGGGCTAAGTACAAAAATCTCAAATATGAATATAGAACA chr4 - 94230402 27611252 27611251 27611508 66618895 66618894 66619151 257 CCTTGGA-AGAAGCACAAAATCACTTTAAAGTTATTACAGTTAATGATACTGGAGCAGGAAAACACTGGAGTGACAATGAAGTCAGAGCTCTGATAAATATATGGTCAGATGAAAAGATACAGCAAATGCTTGAAGGGGCAACAAGAAATAAAGAAATATTTGAGGAAATTGCCAGACGGTTAATGAAATGTGGAATAGACAGAGACTGGAAACAATGTCGCACGAAGTACAAGAACCTAAAATATGAATATCGTGCA ......x-:...::.xx:.....:..:x.:..:.:.x:x:x:.xx..x.x............:.......x...x:.x..:..:.:....:..x...:.:.x...x....x:....x....::x..xx:...x.x..::..x:...........:.......:xxx.x.....:.:.x..:.:xx:xx..xx...:..x................:..::.x:.x........:..:..x............x.x:.. 7M1D250M 173/257 67.3% 257/94230402 0.0% 1/257 0.4% 28799222 NA +11454 chr4 + 190214555 56410509 56410508 56410808 300 TTTCAACA-TGGAGAGTGGAGCAGGAAAGCACTGGACTGAGGAGGAGGTTAAAGCTTTGCTAAGTGTCTGGGCAGAAAAAAATATACGAAAACAACTTTATGGAACACTAAGAAATAAAGGAATATTTATTTACATTGCTAAAAGGCTGCAATCATTAGGAGTATACAGAGACTGGAAACAGTGCTGGGCTAAGTACAAAAATCTCAAATATGAATATAGAACAGTTAAATATGCCCATAACTCTGGAGACAGCTCTAAAACTATGAAGTTCTTCCATGATTTGGATGTAATCCTGCAGTA chr4 - 94230402 27602115 27602114 27602415 66627988 66627987 66628288 301 TTCCAACAGTAGCAAATGAAGGAGGAAAACACTGGACTGTTAATGAAGTCAGAGCTCTGATACACATATGGTCAGACAAAAATATCCAGCAACAACTGGAGGGGACAGTGAGAAATAAAAGGATATTTGAACAGGTTGCTGCTAGACTTCAAAAGTTCGGAATTGACAGGGACTGGAAGCAGTGCAGGACAAAATATAAAAATCTGAAACATGAATACAAGAGCATAAAAAATGGCCAAGACTCAGGGAGTACAAGTAGAAGCATGAAATTTTTTAATGAACTGGATGCTATTCTGGGGCA ..:.....-.:.x:.:..:..x......:..........xx:.x..:..:.:....:..x..x:::.x...x....x........x.::x.......xx.x..:...x.:.........:.:......:xx:.x:.....:xx..:..x...xx:..x...:.xx....:........:......x..:.x..:..:........x...:.......:.::.xx:.x...x...x...x:....x..::::.xxxx..:..x:.....:..:..:x....x:......:x..:...x:.:. 8M1I292M 202/300 67.3% 301/94230402 0.0% 1/300 0.3% 28808394 NA +3081 chr4 + 190214555 56410887 56410886 56410931 45 GACCACTGAAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 - 94230402 17904573 17904572 17904617 76325786 76325785 76325830 45 GACTGCTGAAGATTAAAAAGAAAAGAAAAAAAAAAAAAGAGAGAA ...::......:.x.....:....:.............:.:.... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 38506314 NA +3130 chr4 + 190214555 56413115 56413114 56413151 37 TGGTTTTTTGTTGTTGTTGTTTTTGTCTTGTTTTTGG chr4 - 94230402 38372665 38372664 38372701 55857702 55857701 55857738 37 TGGGTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTTGG ...x......................:.......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 18040450 NA +5503 chr4 + 190214555 56416320 56416319 56416453 134 TGTTTCTAAAAGGAATTCTGTTATATTTACAGGTAAAATGTCAATTGCATCAGTAGATAAGGAAGATGTCTCAGGAAATCCTTTACTTCTGGTTTCTCATGTCAGACCAATGGAACTAGGTATAGTATAATGGA chr4 - 94230402 27599247 27599246 27599380 66631023 66631022 66631156 134 TATTTTTCATCTGAAAACTCTTTCCTTCCCAGGTGAATTATCAGTTTCTTTAGAAGACGATGAGGATGCTCCAGGAGACCCACTACTTTTTATGTCACATGTCAGACCAGTTCAACTAGGTATAGTATGATGGA .:...:.x.xxx...xx..x..x:x..:x.....:..x.:...:..x.x.:..x...::.x..:....:::.....:.:..x:.....:.x:.x..x............:.xx...............:..... 134M 92/134 68.7% 134/94230402 0.0% 0/134 0.0% 28817073 NA +21645 chr4 + 190214555 56419563 56419562 56420053 491 CTTGTCTGATGTATATAA----TGCATATATCTTTTACCT-CTCTACCTAATGCAGGTATCTCTACGTCAGTATTGGAACCCTCTAATAATACAACTTTTATCCCAACTGTAGCAAATGAAGGAGGAAAGCACTGGACTGTGCCAGAAGTCAGGGCTCTAATAGACATCTGGTCTGATAAAAGCATACAACGACAACTAGAGGGAACAGTGAGAAATAAGAGGATATTTCAACAAATTGCAGCCAAGCTTCAGAAATTTGGAATAGACAGAGACTGGAAACAGTGCAGAACAAAATACAAAAACCTAAAACACGAATACAAGATCGTAAGAACAGCTCAAGATCTAG---GCATGACTAAGAGTATGAAATTTTTTACTGAGTTGGATGCTATTCTGGGACCCAATAAAACAGAAAAATCACGAGACCAGGAATCCCAAGATGGAGAACATGTCA------CAGAATGTGCCAACGTAAAAATGGGAGAGGACCAGACAGGTAGG chr4 - 94230402 27602014 27602013 27602512 66627891 66627890 66628389 499 CCTACCTAATGCAGGTAACCTGTGTCTGTATCTCTCCCCTACCCCATACGATACAGGTAATCCACCGCCAGCAGTAGAGGCTTCCAAAACACCGGCTTTCATTCCAACAGTAGCAAATGAAGGAGGAAAACACTGGACTGTTAATGAAGTCAGAGCTCTGATACACATATGGTCAGACAAAAATATCCAGCAACAACTGGAGGGGACAGTGAGAAATAAAAGGATATTTGAACAGGTTGCTGCTAGACTTCAAAAGTTCGGAATTGACAGGGACTGGAAGCAGTGCAGGACAAAATATAAAAATCTGAAACATGAATACAAGAGCATAAAAAATGGCCAAGACTCAGGGAGTACAAGTAGAAGCATGAAATTTTTTAATGAACTGGATGCTATTCTGGGGCACAGTACCATGGAACAAGCAAG------TAAATCAGATAATGAGGAAAGTGAGAGGCCTCCAGAGTGGACAGAAGCAAAATCAGGAAAGGACTCCATAGGTAAG .:.::..:...:.x:...----..:x.:.....:.:x...-.:.:.:x::..:......x::.xx..:...:.x.:..:x.:..:..x.xxx.::....:..:.....x....................:...........xxxx........:.....:...x....x.....x..:....::..x..:.:......:.....:..............:.........x....::....x..:.::.....:..:..:.....x.....:........:........:........:.....:..:.....:..........x.:...:..xx.x:.....:::..---.:.::.x..::..:.............x...::................:.x..:..xx.::...x..x..x.------x:....xx.x:...::...x:..xx.------....:..x:.x:.x.:....x::...:.....:xx.:.....:. 18M4I18M1I306M3I73M6D26M6I44M 348/485 71.8% 499/94230402 0.0% 20/485 4.1% 28817549 NA +9713 chr4 + 190214555 56419656 56419655 56419954 299 TTATCCCAACTGTAGCAAATGAAGGAGGAAAGCACTGGACTGTGCCAGAAGTCAGGGCTCTAATAGACATCTGGTCTGATAAAAGCATACAACGACAACTAGAGGGAACAGTGAGAAATAAGAGGATATTTCAACAAATTGCAGCCAAGCTTCAGAAATTTGGAATAGACAGAGACTGGAAACAGTGCAGAACAAAATACAAAAACCTAAAACACGAATA-----CAAGATCGTAAGAACAGCTCAAGATCTAGGCATGACTAAGAG---TATGAAATTTTTTACTGAGTTGGATGCTATTCTGGGA chr4 - 94230402 27611282 27611281 27611586 66618817 66618816 66619121 305 TTATTACAGTTAATGATACTGGAGCAGGAAAACACTGGAGTGACAATGAAGTCAGAGCTCTGATAAATATATGGTCAGATGAAAAGATACAGCAAATGCTTGAAGGGGCAACAAGAAATAAAGAAATATTTGAGGAAATTGCCAGACGGTTAATGAAATGTGGAATAGACAGAGACTGGAAACAATGTCGCACGAAGTACAAGAACCTAAAATATGAATATCGTGCACTGCAGAAAGAAAA--TGAACATCTTGGTAATCCCAGGAGAAAAATGAGATTTTACGATGAAGTTGACTGTATCTTAAGA ....:x..::.:xx.xx.x..:..x......:.......x..xxxxx........:.....:...:.:..x.....x...:...:x.....:.:.xx:..x..:..::..:::........::::......x.:x.......x:xxx:.:.xxx.....x........................:..:x.x..:..:.....:.........:.:.....-----..xx::x.x.....x.--.x..x....x..:.xxx.:.:...---x....:.....x::x...:x.x..:xx...::.::.. 220M5I16M2D24M3I37M 198/297 66.7% 305/94230402 0.0% 10/297 3.4% 28808374 NA +10119 chr4 + 190214555 56419659 56419658 56419959 301 TCCCAACTGTAGCAAATGAAGGAGGAAAGCACTGGACTGTGCCAGAAGTCAGGGCTCTAATAGACATCTGGTCTGATAAAAGCATACAACGACAACTAGAGGGAACAGTGAGAAATAAGAGGATATTTCAACAAATTGCAGCCAAGCTTCAGAAATTTGGAATAGACAGAGACTGGAAACAGTGCAGAACAAAATACAAAAACCTAAAACACGAATACAAGATCGTAAGAACAGCTCA-AGATCTAGGCATG--ACTAAGAGTATGAAATTTTTTACTGAGTTGGATGCTATTCTGGGACCCAA chr4 - 94230402 27594414 27594413 27594716 66635687 66635686 66635989 303 TCTCAAC-ATGGAGAGTGGAGCGGGGAAGCACTGGACTGAGGAGGAGGTTAAAGCCTTGCTAAGCATCTGGTCGGAGAAGAGCATCAGGAAGCAGCTCCACGGCACCCTGAGGAATAAAGGAATATTCATCTACATTGCCAAAAGGCTGCAGGAGTTAGGAGTTTGTAGAGATTGGAAACAGTGCCGGGCAAAGTACAAAAACCTGAAGTATGAATACAGAACGGTTAAATACGCCCGCAACTCCGGGGACGCCACTAAAACTATGAAGTTTTTTCACGACCTGGATGCCATACTGCGATGCGA ..:....-:.:.x:.:..:..x:..:.............x.xx:..:..:.::..::.:x..::.........x..x..:.....xx::x::..:..xx.x..x..xx....:.....::.:.....:xxx:.x.....x:xx.:...x...:.:..x...:.xx::.....:............x.::....:...........:..::.:.......::.:x..x.:.xxx..:.:-.:x..::..x.:.--.....:.x......:......xx:..x:.......:..x...x..:x.:. 7M1D230M1I13M2I50M 195/300 65.0% 303/94230402 0.0% 4/300 1.3% 28825245 NA +4323 chr4 + 190214555 56422349 56422348 56422477 129 TGTTCATACAGTCATTGCTGGAGATGTAGCTGAAGATGATTCAGTCAGTAATAAGTCAGAAGACATAGGAGATACAGATAAAAAACAAGGTCTTGACACACATAAAATAATATTCTGGTTTTTTTTTTT chr4 - 94230402 27603520 27603519 27603644 66626759 66626758 66626883 125 TATTTACACAGAAATACCTGGAGACACAGGTGAAGAGGACTCTGTTAGTAATTTGTCTGAAGACCTACAGGTTGCAGATATAAAGAAAGTTTCTGACTCAGGTAAACTGAAA----AGTCTTCTATTTT .:..:.:....xx..xx.......:::..x......x..:..x..:......xx...x......x..x::.x.:......x...:x...x.::....x..x:....x.:.x.----:..:..:.x.... 112M4D13M 85/125 68.0% 125/94230402 0.0% 4/125 3.2% 28818829 NA +18275 chr4 + 190214555 56428238 56428237 56428609 372 ATTTGTAGGTAATC------CTTTAGAAGATGCTAAAAGTCATTTACAGATTATAACAGTGAGTAACACAGAGGCCGGAAAATACTGGTGTGACAGTGAGGTCAGAGCATTGATA------TGGTCTGATGAAAAAATTAAGCGAATGCTTGAAGGGGCCACAAGAAACAAGAAAATATTTGAGGAAATTGCCAGAAGATTAATTAATGCAGTTTGGGATAGACAGAGACCGGAAACAATGTCATACGAAATATAAAAATGTAAAATATGAATATAGCATTTTACAAAGAAAAAA---------TGGCAACCCTCCAAGAAAAATGAGATTTTATGAAGAAGTTGACTGCATCCTAAGAAAACCAACTCTCAGAACTGCCAAATGGAGACATG chr4 - 94230402 27611232 27611231 27611620 66618783 66618782 66619171 389 ATTTTCAGATAATCATATCCCCTTGGAAGAAGCACAAAATCACTTTAAAGTTATTACAGTTAATGATACTGGAGCAGGAAAACACTGGAGTGACAATGAAGTCAGAGCTCTGATAAATATATGGTCAGATGAAAAGATACAGCAAATGCTTGAAGGGGCAACAAGAAATAAAGAAATATTTGAGGAAATTGCCAGACG----GTTAATGAAATGTGGAATAGACAGAGACTGGAAACAATGTCGCACGAAGTACAAGAACCTAAAATATGAATATCGTGCACTGCAGAAAGAAAATGAACATCTTGGTAATCCCAGGAGAAAAATGAGATTTTACGATGAAGTTGACTGTATCTTAAGAAGACAGCCTCTTGGTCCATCAGGCTGGGGATGTG ....x:..:.....------.:..:.....x..xx...:...:..xx.::....x.....x.:.:.:..x.::..x......:.....x......:...:........x:.....------.....x........:..xx...:...............x........:..::.......................x.----:......x.:.x...:............:............::.....:..:..:..:x..............x.:::x:.:..:.:.:....---------...:..:..:xx:.................:..x...........:...:......:..x:x....::.xx.xx.x::x...:..::.. 14M6I95M6I77M4D93M9I89M 279/368 75.8% 389/94230402 0.0% 25/368 6.8% 28817006 NA +9862 chr4 + 190214555 56435345 56435344 56435517 173 CTCACCGGTGCTGCAGCCCCACGAGTCCCAGAGTGATCACATGCGGTACATCCAGCTGCGTGGGCCACTCTCCTGAGGCGATGCACCCGAACACGCCACATTCCTCTCGGATCCCCAACTCCTCCAGCTCCATGTCGCCGCCGAAAGCACGT---GGAAGGACCTG-------CCGCTGCGGC chr4 - 94230402 27621558 27621557 27621731 66608672 66608671 66608845 174 CTTACCTGTGCTGCAGCCCCACGAGCCCCAGCGTGATCACATGGGGCACGTCCAGCTCGGTGGGCCACACGCCGGAGGCGATGCAGCCGAACACGCCGCACTCTTCGCGGATGCCCAGCTCCTCCAGCTCCATGGCG---------GCACGTGGCGGCGGGACCCGGCCCGGCCCGCTCCGGC ..:...x..................:.....x...........x..:..:.......xx.........x.x..x...........x...........:..:..:..x.....x....:................x..---------......---..x:.....:.-------.....x.... 137M9D6M3I11M7I10M 140/164 85.4% 174/94230402 0.0% 19/164 11.6% 28813787 NA +3261 chr4 + 190214555 56438404 56438403 56438466 63 AAAGGTTTTTTTTGTTGTTGTTTTTTGTTTGTTTTGCTTTGTTTTTGAAATGGAGTCTCGCTC chr4 - 94230402 45866970 45866969 45867032 48363371 48363370 48363433 63 AAAACCTTTTTTTGTTGTTGTTTTTTGTTTGTGTGGTTTTTTTTTTGTTACAGCATTTTGTTC ...:x:..........................x.x.:...x......xx.::.x:.:.:.:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 10571434 NA +11126 chr4 + 190214555 56441622 56441621 56441862 241 AAGTTTCTGAATTTTGGTCTATTTCCATTTTATTTCCAC---AGTACTGAACATTGGTAAAAAATTATATGAGGGTAAAACAAAAGAAGTCTACGAATTGTTAGACAGTCCAGGAAAAGTCCTCCTGCAGTCCAAGGACCAGATTACAGCAGGAAATGCAGCTAGAAAAAACCACCTGGAAGGAAAAGCTGCAATCTCAAATAAAATCACCAGTTGTATTTTTCAGTTATTACAGGAAGCAGGT chr4 - 94230402 27622644 27622643 27622887 66607516 66607515 66607759 244 AACTCTTCGCATCTAAAATTGCCTTTATTTTATTTTTCCTCTAGAACTGAAACTTGGTAAAAAAGTTAATGAGGGTAAAACGAAAGAAGTGTATGAGCTGCCGGATATCCCGGGATGCGTTCTGATGCAGTCCAAGGACCAAATAACAGCAGGGAATGCCGCTAGGAAGGACCGGATGGAGGGGAAGGCTGCCATCTCCAACACCACCACCAGCTGCGTGTTCCAGCTGCTGCAGGAAGCAGGT ..x.:.::.x..:.x::x:.:::.::.........::x.---..x......xx...........x.xx.............:........x..:..::..:::..:.x:..:...x:x..:..xx................:..x........:.....x.....:..::...:xx....:..:..:.....x.....x..:.xx.:......:..::.x..:...:.::.:............ 39M3I202M 170/241 70.5% 244/94230402 0.0% 3/241 1.2% 28818978 NA +3582 chr4 + 190214555 56443257 56443256 56443323 67 CTGCAACCTCCATCTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCCAGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx.x..:...........:.x...x..x.x........::.x.........:.:.... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 38246131 NA +12647 chr4 + 190214555 56446688 56446687 56446883 196 TATGTAGGTATTAAAACTGCCTTCACCAGAAAATGTGGGGAGACAGCTTTCATTGCACCGCAGTGTGAAATGATTCCAATTGAATGGGTTTGCAGAAGAATAGCAACTGGTTCTTTTCTCAAAAGAAATCCTGGTGTCAAGGAAGGATATAAGTTTTACCCACCTAAAGTGGAGTTGTTTTTCAAGGTAATTATCT chr4 - 94230402 27623999 27623998 27624194 66606209 66606208 66606404 196 TATTTAGGAATCAAAACGGCTTTTGTCAGGAAACAGAGTGACACAGCTTTCATAGCAGCTCACTGTGAAATGATCCCAATTGAATGGGTCTGCAGAAGAATTGCTACTGGCTCTTTCCTCAAAAGAAACCCTGGTGTCAAAGAAGGCTATAAGTTTTACCCACCTAAAATTGAGATGTTTTACAAGGTAAGTTTCT ...x....x..:.....x..:..:::...:...::x:.x..x...........x...x.x..x...........:..............:...........x..x.....:.....:...........:...........:.....x.....................:.x...x......x........x.x... 196M 162/196 82.7% 196/94230402 0.0% 0/196 0.0% 28822689 NA +19906 chr4 + 190214555 56448391 56448390 56448942 552 AATTGTACTACTATACTTTAT-------------TCACAGGATGATGCCAATAATGACCCACAGTGGTCTGAGGAACAGCTGATTGCTGCAAAATTTTGCTTTGCTGGACTTCTTATAGGCCAGACTGAAGTGGATATCATGAGTCATGCTACACAGGCTATATTTGAAATACTGGAGAAATCCTGGTTGCCCCAGAATTGTACACTGGTTGATATGAAGGTACAGATAAAACAAGTACAGATAAAACAACAGGATTTGAAAGTAAAGGTTATAGTTGAGAGATGCTTTCATAAAATAGTTTTTGAAAACTTTGTTGACATGCTGTTTCCAGATTGAATTTGGTGTTGATGTAACCACCAAAGAAATTGTTCTTGCTGATGTTATTGACAATGATTCCTGGAGACTCTGGCCATCAGGAGATCGAAGCCAACAGAAAGACAAACAGGTAGATAATGCTTCAGGTTTTTTTATCCTTTTTGAGATCAAGCTGAGATAGAGGAGAAAGGAGAGATGAGGGGAAAAAGCAAATTATTGTTCCTAATGATATGAACCTGT-----------TTTGTGGAT chr4 - 94230402 27624509 27624508 27625037 66605366 66605365 66605894 529 AACTGAACTTGCATGCTTTATCTGATTGGTTCCTTAATAGGATGATGCCAATAATGATCCACAGTGGTCTGAGGAGCAGCTAATTGAAGCAAAATTCTCTTTTGCTGGACTTACTATTGGCAAGACTGAAGTGGATATTATGGCTCGTTCTACTCAAGCTATTTTTGAGATCCTGGAAAAATCATGGCAGCCCCAAAACTGCACTCTGGTGGACCTGAAGGTAT-GAAAATCTGATTTCCCATGATCTTA---GTTTTGACAGGAAATATACCACT------ATAGTTCCTTAAAGAAACTTCTTA-----TTGTC---------TTTATAGATTGAATTTGGTGTTAATATTTTGACCAAAGAAATTGTTCTTGCTGATGTTATTGATAATGATTCATGGAGACTGTGGCCATCGGGAGACAGAAGCCAGCAGAAGGACAAACAGGTAA--------------CATTTTAGTCTT-------TAAATTTTAAGTCAATAGGAAAGGAGAAAGGTTGAGAAAAATAACAT--TTCTTCCTATAGCTAAGCATCTCTACTATATATagtttgtggat ..:..x...xx:..:......-------------.x.:...................:.................:.....:....xx........:.x:............x:...x...x................:...:x..:.x....x..:.....x.....:..x.....:.....x...:x......:..:..:..x.....x..:x........:-..x..xx::.x.x.xx..:.xx:x.---.x.....x..x...x:.xx:.x.------..:x..:.x....:x.::..:.x.-----....:---------...x:.................:..:.xx:x................................:........x........x........:.....:x.......:.....:............:--------------:x.....x:...-------.x..x:.x.::.x:.x::.........:.x.xx.:......xx.x..--..x......xx.x..x.x.:..x.-----------......... 21M13I190M1D25M3D23M6D24M5D5M9D125M14D12M7D47M2D24M11I9M 381/505 75.4% 529/94230402 0.0% 71/505 14.1% 28823882 NA +6926 chr4 + 190214555 56450584 56450583 56450754 171 TACTTGTTTTCTAAACTTTCTATCTTATTTTCTAGTCTTATCGGGACCTCAAAGAAGTAACTCCTGAAGGGCTCCAAATGGTAAAGAAAAACTTTGAGTGGGTTGCAGAGAGAGTAGAGGTAAACCTTCTATAGTAAAACTGTATGTATTATGTGTTTTTCTTCTAAGAAA chr4 - 94230402 27625935 27625934 27626082 66604321 66604320 66604468 148 TGCTTGTCTTTT---TTTTTTTCTTCCTTTTTCAGTCCTATCGAGATCTGAAGGAAGTGACTCCTGAAGCATTGCAGATGGTTAAGAGAAACTTTGAATGGGTTGCAGAAAGAGTAGAGGTA----TTCCCTGGTG----------------GCATTTTTCTTCTAATGAA .:.....:..:.---:...:.x::.:x....::....:.....:..:..x..:.....:..........x::.x..:.....x....:.........:...........:............----...:x.:..:----------------.::............x:.. 12M3D107M4D10M16D19M 113/148 76.4% 148/94230402 0.0% 23/148 15.5% 28824649 NA +3039 chr4 + 190214555 56450906 56450905 56450964 59 CTCCCGGGTTCACGCCATTCTCCTAGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.......x.:xx...x.xx:.........::.:.........:......x.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 38253767 NA +12756 chr4 + 190214555 56451819 56451818 56452067 249 TTTATTCATTTTTGTTTTTATGTTCTTTTCATATCCACGTATTTTTTCTT-CAGTTGCTTTTGAAATCAGAAAGTCAGTGCAGGGTTGTAGTGTTGATGGGCTCTACTTCTGATCTTGGTCACTGTGAAAAAATCAAGAAGGCCTGTGGAAATTTTGGCATTCCATGTGAACTTCGAGTAACATCTGCGCATAAAGGACCAGATGAAACTCTGAGGATTAAAGCTGAGTATGAAGGTAAACCACAAGTAA chr4 - 94230402 27626130 27626129 27626379 66604024 66604023 66604273 250 TTTTTTTTCCTTTTTTTTCCTCCTTCTGTCTTCTCCCTTAACTCTTTCTTGTAGTTGCTTCTGAAAACAAAGAGCCAAGGTAGAGTTGTGGTATTGATGGGATCTACTTCTGACCTTGGCCACTGTGAGAAAATAAAGAAGGCATGTGCAACCTTTGGAATTCCTTGTGAGTTAAGAGTAACCTCCGCTCACAAAGGGCCAGATGAAACTCTGAGGATCAAAGCAGAATATGAAGGTACATGTCAAAGAA ...x..:x::...x....:x.x:.::.x..x.x...x:xx.:.:......-:........:.....x..:.:..:..:x.:..:.....:..:........x...........:.....:........:.....x........x....x..x:.....x.....x.....::.xx.......x..:..x..:.....:....................:.....x..:..........x.:xx...:x.. 50M1I199M 187/249 75.1% 250/94230402 0.0% 1/249 0.4% 28825689 NA +11777 chr4 + 190214555 56453586 56453585 56453768 183 TCTTGTCATTTCCCT-----AGGGGATGGCATTCCTACTGTATTTGTGGCAGTGGCAGGCAGAAGTAATGGTTTGGGACCAGTGATGTCTGGGAACACTGCATATCCAGTTATCAGCTGTCCTCCCCTCACACCAGACTGGGGAGTTCAGGATGTGTGGTCTTCTCTTCGACTACCCAGTGGTAAGAT chr4 - 94230402 27627399 27627398 27627586 66602817 66602816 66603004 188 TTTTTTCTTTCCCCCCTGCAAGGAGATGGAATCCCGACTGTGTTTGTTGCAGTAGCTGGCAGAAGCAATGGTTTAGGGCCAGTAATGTCTGGTAACACTGCTTACCCTGTTGTCAACTGTCCTCCCCTCTCATCTGACTGGGGTGCTCAGGATGTGTGGTCCTCTCTCAGACTGCCCAGTGGTAAGAT .:..x..x..:...:-----...:.....x..:..x.....:.....x.....:..x........:........:..:.....:........x........x..:..x...:...:.............x..:.x........x.:...............:.....:x....:.............. 15M5I168M 151/183 82.5% 188/94230402 0.0% 5/183 2.7% 28826187 NA +10241 chr4 + 190214555 56459352 56459351 56459539 188 TTTCCTTGCTGAACCAATAGGTCTTGGCTGTTCAACCGTACTTTCTCCAGAAGGATCAGCTCAATTTGCTGCTCAGATATTTGGGTTAAGCAACCATTTGGTATGGAGCAAACTGCGAGCAAGCATTTTGAACACATGGATTTCCTTGAAGCAGGCTGACAAGAAAATCAGAGAATGTAATTTATAAG chr4 - 94230402 27628236 27628235 27628414 66601989 66601988 66602167 179 TTTCTTTGC---------AGGTCTTGGCTGTCCTACTACTCTGTCACCTGAAGGAGCTGCTCAGTTTGCTGCCCAGATTTTTGGTTTAAACAACCACTTGGTATGGGCCAAACTGCGATCAAACATGTTAAATACATGGATCTCTTTGAAGCAGGCTGACAAAAAATTGCGGGAGTGCACCTTGTAAG ....:....---------.............:.x..:::x..x..x..x......x.x.....:........:.....x.....x....:......:.........:x..........x...:...x..:..:........:..:.................:...x.xx.:..:..:.x:..:.... 9M9D170M 142/179 79.3% 179/94230402 0.0% 9/179 5.0% 28831116 NA +3355 chr4 + 190214555 56469827 56469826 56469935 109 ATAATCTCTTCCATGTTTTTTCCCAACTATTTGCTGATTTTTTTTAACGTTTTTTTCCTTCCTTTTTTTCCCCCCTTTTGCTTGTCAATAATGTTTCTGAACTGGAAGG chr4 - 94230402 33215651 33215650 33215757 61014646 61014645 61014752 107 ATAACCCCCTGAACATGTGTTCTTCATCAGTTGCTTTTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCTCACA--GTTTCCCAGCTGGCAGG ....:.:.:.xx.::.x.x...::x.::.x.....xx......:.:.x.::.........::.:......:::...:..x:..x::x.:.--.....:x.:....x... 90M2D17M 67/107 62.6% 107/94230402 0.0% 2/107 1.9% 23254176 NA +3349 chr4 + 190214555 56472421 56472420 56472498 78 CTGCAGCCTCTGACTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGTGATTACAGGCATGTGCCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:.....:xx::..:.::........:.x...x.xx.x.........:..........x:.:....--.:..::... 67M2D9M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 38275295 NA +3011 chr4 + 190214555 56477257 56477256 56477316 60 AAATATGTCTCTTTTCACATTCATAGTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 - 94230402 56232426 56232425 56232485 37997918 37997917 37997977 60 AAACATTCATCTTTTCTCTCTTAAAAGATTATTTCTCTCTCTCTCTTTTTTTTTTTTTTT ...:..x:x.......x.x:.:.x.:xx:.x.:........................... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 244831 NA +3135 chr4 + 190214555 56477283 56477282 56477317 35 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929913 18929912 18929947 75300456 75300455 75300490 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..................:................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 37547370 NA +3226 chr4 + 190214555 56477284 56477283 56477319 36 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:.................................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 37547372 NA +3095 chr4 + 190214555 56477286 56477285 56477321 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 37547374 NA +3725 chr4 + 190214555 56480335 56480334 56480416 82 CTGCAGCCTCCACCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCACCCGAGTAGCTGGGACTACAGTCACGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA----CACGTG-CACCAC ..:.....:xx.x..:.:...........x...x..x.x.......x::.:.........:....----......-...... 65M4D6M1D6M 61/77 79.2% 77/94230402 0.0% 5/77 6.5% 38283209 NA +3327 chr4 + 190214555 56502475 56502474 56502543 69 ATATATATGTATATATATATACATATATATATATATATAAACATGAAATATATATATATGGCTCCTTTG chr4 - 94230402 45565800 45565799 45565863 48664540 48664539 48664603 64 ATAGATATGTATGTAAATGTATGTATATGTATATCCATAAACATGAAAT-----CAAATGGCTTCTGTG ...x........:..x..:..::.....:.....x:.............-----:.x......:..x.. 49M5D15M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 10936675 NA +3757 chr4 + 190214555 56510847 56510846 56510920 74 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTTTTGTGCCTCAGCCTCCCAAGTAGCTGGACTTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.............x..:x::x.x........::............x:....x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 38313721 NA +3565 chr4 + 190214555 56519931 56519930 56519996 66 CTCCTGGGTTCAAGTGAGTCGCATGCCTCAGCCTCCCAAGTGGCTAGGATTACAGGCATGCGCCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.............xx..:..x.x........::.....:...:.:.:....--.:...:.... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 38322792 NA +3374 chr4 + 190214555 56520078 56520077 56520150 73 CCACAACCTCCGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAACCTCCTGAGTAGCTGGGACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .:...:..:xx:x..:.::..........x...x..x.x....:...::::.........:......x.::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 38322952 NA +3054 chr4 + 190214555 56540598 56540597 56540653 56 GAAAGAAAGAGAGAGAAAGAAGGAAAAGAAAGGAAGAAAGAGAAAGAAAGAAAAGA chr4 - 94230402 68467542 68467541 68467597 25762806 25762805 25762861 56 GAAAAAAAGTGAGAGGAAGAAAGAGAAGAAAGAGATCAAAATAAATAAAAGAAAGA ....:....x.....:.....:..:.......::.xx..:.x...x...::..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -11926944 -82303458 +3141 chr4 + 190214555 56540599 56540598 56540663 65 AAAGAAAGAGAGAGAAAGAAGGAAAAGAAAGGAAGAAAGAGAAAGAAAGAAAAGAGAGAAAGAAA chr4 - 94230402 53664718 53664717 53664782 40565621 40565620 40565685 65 AGAGAAAGCAAGAGAGTAAAACAAAAGAAAGGCCGAAGGAGAAAGACCAAAGACAGAGGAAAAAA .:......x:.....:x:..:x..........xx...:........xx:..:.x....:..:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 2875881 NA +3229 chr4 + 190214555 56543911 56543910 56543978 68 TGTGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTG-----TGTGTATGTGAGAG chr4 - 94230402 18982315 18982314 18982386 75248017 75248016 75248088 72 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT-TTTGTGATAATTTTGTGCCTGAGAG ...............:..x.................::..x:.x.:.-.x....-----.x...::x...... 47M1D6M5I14M 54/67 80.6% 72/94230402 0.0% 6/67 9.0% 37561596 NA +3307 chr4 + 190214555 56543913 56543912 56543948 36 TGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG .............:...................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 37561598 NA +3548 chr4 + 190214555 56543913 56543912 56544012 100 TGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGAGAGA--------GAGAGAGATGGAG chr4 - 94230402 81629064 81629063 81629171 12601232 12601231 12601339 108 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAGAGTGGTGGGG ..........:..:......................x..x.xxxx..:.x.:x:.:..x:..:xxx.x.:.....:.xxx....:..--------.....x.:...:. 87M8I13M 70/100 70.0% 108/94230402 0.0% 8/100 8.0% -25085151 -69145251 +3093 chr4 + 190214555 56543915 56543914 56543950 36 TGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ...........:....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 37561600 NA +3204 chr4 + 190214555 56543915 56543914 56544012 98 TGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAG chr4 - 94230402 81629064 81629063 81629161 12601242 12601241 12601339 98 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAG ..........::....x...................:..x.xxxx..:.x.:x:...:x:x.:xxx.x.:.....:.xxx....:..x.:x:x..... 98M 64/98 65.3% 98/94230402 0.0% 0/98 0.0% -25085149 -69145253 +3222 chr4 + 190214555 56543955 56543954 56543994 40 TGTGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...............:..x.................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 37561640 NA +3185 chr4 + 190214555 56543957 56543956 56543992 36 TGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:..:...................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -25085107 -69145295 +3436 chr4 + 190214555 56543957 56543956 56543996 40 TGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .............:......................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 37561642 NA +3222 chr4 + 190214555 56543959 56543958 56543998 40 TGTGTGTGTGTATGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...........:....x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 37561644 NA +3786 chr4 + 190214555 56584042 56584041 56584114 73 CTGCAGCCTTGACCTCTTGGGCTCAAGTGATCCTCCCGCCTCAGCCTTGCAAGTAGCTGGGACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x:.x..::....:.......x.:.x.xx.x.........x...........:......x.::.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 38386916 NA +3517 chr4 + 190214555 56589666 56589665 56589756 91 TTCCTAAGGTTTTTTTTGTTGTTGTTGTTGTTTTGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTGTGTGTGGGGGGGTTTTGTTTTT chr4 - 94230402 59743360 59743359 59743442 34486961 34486960 34487043 83 TTCAGAGGGGTTTGCTTGGTGTGGTTTTTTTTTTTTGCTGTTGTTGTTGCTGCTGTTGCTTTGTTTT--------GGGGAAGTTTATTTTT ...xx.:..x...x:...x...x...x..x....xx.:.x.........:..:.....:........--------....::x...:..... 67M8D16M 62/83 74.7% 83/94230402 0.0% 8/83 9.6% -3153694 -91076708 +3171 chr4 + 190214555 56589685 56589684 56589770 86 TGTTGTTGTTGTTTTGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTGTGTGTGGGGGGGTTTTGTTTTTTTGTTTTATTTTTT chr4 - 94230402 70302652 70302651 70302737 23927666 23927665 23927751 86 TGGTACTTTTTTTTTGTTTGTTTGTTATTGTTATTGTTGTTAGTTTCTATTTTCTGGGTGGCTTTTATTTGTTTATTTTTTCCCTT ..x.::.x..x.....xx.x......:.....:........xxx..:.xx.x.x....x..x....:...x...:....x.:::.. 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% -13712967 -80517435 +3181 chr4 + 190214555 56589692 56589691 56589734 43 GTTGTTT-TGGGTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTG chr4 - 94230402 38372657 38372656 38372700 55857703 55857702 55857746 44 GTTGTGTGTGGGTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTTG .....x.-.....................x.............. 7M1I36M 41/43 95.3% 44/94230402 0.0% 1/43 2.3% 18217035 NA +3123 chr4 + 190214555 56600097 56600096 56600151 55 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGAGATGAGGTTTTGCCATTTTGT chr4 - 94230402 46673276 46673275 46673330 47557073 47557072 47557127 55 CTTTCTTTTTCTTTTTTTTTCTTTTTTGTTTAAAAATAAAGCTTTGACAATCTGT ....:.....:.........:......x.x..:.:..:.:.:....x..x.:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 9926821 NA +3058 chr4 + 190214555 56636314 56636313 56636368 55 AGAAAACACAATTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTCTTCCATTTTTAG chr4 - 94230402 43675272 43675271 43675326 50555077 50555076 50555131 55 AGAAAACACATGATCCTTTCTTTTTCCTTTTTTTTTTTTTTCCCCTCCTTGTTAG ..........xxx..:...:......:...:..........:.:::.x..x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 12961042 NA +3080 chr4 + 190214555 56638417 56638416 56638485 69 TTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTCTTTCTTTCTCTCTTTCTTG chr4 - 94230402 9693768 9693767 9693836 84536567 84536566 84536635 69 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTTG ...:.:..:..::.:.::....:..::.:x...:..x.:...x.:x...:........:..:.::.... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 46944649 NA +3398 chr4 + 190214555 56638450 56638449 56638513 64 TCTTTCTTTCTCTTTTCTTTCTTTCTCTCTTTCTTGCTCTGTCTTTCTTTCTTTCCTTTGTTTT chr4 - 94230402 88442035 88442034 88442098 5788305 5788304 5788368 64 TCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTTT .....:.x...:..x...........x:......::.::.x........xx.x.x......... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -31803585 -62426817 +3029 chr4 + 190214555 56641465 56641464 56641538 74 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGGAGTGGGAAGAGAGAGCTTCTATCTGGAAGAAGAAAGAAA chr4 - 94230402 69606398 69606397 69606471 24623932 24623931 24624005 74 TTTTCTTTTTTTTTTTCTTTATTTCTTTTTAAAAAAGTTTAAAGAAACAGCAGTTAGTCTCAGGAGTAAAGAAA ....:...........:...x...:......x.::...xx:....:.x...xx:..x::xx.:..:x....... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% -12964933 -81265469 +3015 chr4 + 190214555 56647149 56647148 56647200 52 AAAAAGAAAAAGAAAAAGAAAAGAAAACAAAGAAACAAGCCTATTTGCTTAA chr4 - 94230402 22603669 22603668 22603720 71626683 71626682 71626734 52 AAAAAGAAAAAGAAAAACAAAACAAAACAAAGGAACAACATTGTTTCCCAAA .................x....x.........:.....xx:.:...x.:x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 34043480 NA +3245 chr4 + 190214555 56683097 56683096 56683187 91 TTATTATCGTTATTTTACAGAAGAGGAAACTGATACTCAGAAAGACTAAATAACTTTCCCAAGGTCACAGTGAATGGTGGGGGTGGAATTT chr4 - 94230402 15193220 15193219 15193310 79037093 79037092 79037183 91 TTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTT .....x..xx:......:.xxx.::.:..:...x.......x.:.:x.........:..:.......:.xx.xx..x::.:::.::..... 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 41489877 NA +3816 chr4 + 190214555 56685878 56685877 56686038 161 TAATGTATTATATATAATGTATTATATTGTATTATATATAATGTATTATAATGTATTATATATAATGTATTATATATTATATGATGTATTATATATTATATAATATATTATTTGTATT-ATATATTATATAATATATTATTTGTATTATATATTATATCAAT chr4 - 94230402 67847357 67847356 67847508 26382895 26382894 26383046 152 TGATGTTTTTTAT-TAATGTA----AGTGTAATGTATATTGTACATCAGAG---ATTGTAAACACTGTATTATAAATCATACATTGCATTATATATATTACAATACATTATGTACTTTAATAGAGCGTGT-CTGTAATGTGTGTGTT-TACATTATACAAAT .:....x..x...-.......----.x....x.:.....x:.::..:.x.:---...:..x.:.x.........x..:...::x..:.........xx..:....:.....x.::x..-...x.x::.:.-x.:..x.:.x...:..-..:......:x... 13M1D7M4D26M3D64M1I11M1D16M1D14M 106/151 70.2% 152/94230402 0.0% 11/151 7.3% -11161479 -83068923 +3013 chr4 + 190214555 56688082 56688081 56688150 69 GAGGGAGGATGAGGAGAAGAAGGAAGGAAGGAAGGAAAAAAGGAGGGAGGGAGGAAGGAAGGGAAGGAG chr4 - 94230402 73368862 73368861 73368930 20861473 20861472 20861541 69 GAAAGCAGATAAAAATTAGAAGACAGGAAGGAGGGAAAAAGGGAGAGAAGGGAAAAAGATGACAAGAGG ..::.x:...:.::.xx.....:x........:.......:....:..:..:::..:..x.:x...::. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% -16680780 -77549622 +3541 chr4 + 190214555 56688246 56688245 56688382 137 GGAAGGGAAGGAGAGAGGGGGAAGAGGAAGGAAGGAAGAAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAGGGAAGGGGAAGGGAGGGAAGAAGGGAGAGAGGGAGGGAGGGAAGGAGGGAG--------AGAGGGAAGGAGA chr4 - 94230402 1312662 1312661 1312802 92917601 92917600 92917741 141 GGCAGGGAGGGAAAG---TGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAG-ATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGA ..x.....:...:..---x...x:::...x::.x.:.....x...xxx..x...::::....-.x.xxx:...:::......:...:....:....x.....::::.:..x:.:....:..:x.--------.x..:....:... 15M3D44M1D61M8I13M 85/133 63.9% 141/94230402 0.0% 12/133 9.0% 55375584 NA +3258 chr4 + 190214555 56688292 56688291 56688389 98 GAAGGAGGGAAGGAAGGAAGGAAGGAGGGAAGGGGAAGGGAGGGAAGAAGGGAGAGAGGGAGGGAGGGAAGGAGGGAGAGAGGGAAGGAGAGAAGGAA chr4 - 94230402 40465775 40465774 40465860 53764543 53764542 53764628 86 GGAGAAGGGATGACAAGAATGA----------GAAAAGGTAGAGAAGCAAGGGGAAATGGGTGT--GGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAA .:..:.....x.:x.:...x..----------.::....x..:....x.:..:..:.x..:x.x--...:.......:.....:........::.:.. 22M10D32M2D32M 61/86 70.9% 86/94230402 0.0% 12/86 14.0% 16222517 NA +3109 chr4 + 190214555 56694302 56694301 56694354 53 GGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGAGAGGGAGAGGGAGGAGAGGGA chr4 - 94230402 7707318 7707317 7707370 86523033 86523032 86523085 53 GGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ....:.xx..:....:::.::.:........:..x..........:.:..... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 48986984 NA +3178 chr4 + 190214555 56719480 56719479 56719523 44 CTATATATATACACACACACACTATATATATATATATGCATACA chr4 - 94230402 71295528 71295527 71295571 22934832 22934831 22934875 44 CTCTCTATATGCACACACACACTATATATATATGTATGTATATA ..x.x.....:......................:....:...:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% -14576048 -79654354 +3119 chr4 + 190214555 56720178 56720177 56720241 64 AACAGAGCAAGACCCTGTCTCAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAATAAAA chr4 - 94230402 78791803 78791802 78791866 15438537 15438536 15438600 64 AACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAATCACAAAA ....:.:...:xxx.....:x..::.........:.:...:...:.....x.....xx.:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -22071625 -72158777 +3679 chr4 + 190214555 56721186 56721185 56721238 53 ATATATATATATATATATATATATATTTGTGTGTGTGCATATGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.............:...x...:............ 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 37016912 NA +3061 chr4 + 190214555 56738978 56738977 56739059 82 AAGAAGAGGAAGAAGATGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:..:..x..x......x.x.xx.:x..xx.:.....:....x......:..:..:...:x...xx....:::x..x.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -2583170 -91647232 +3777 chr4 + 190214555 56775386 56775385 56775461 76 ATATATATATATATATATATATATATA-TATATATATATATATATATATGTAGAGAGAGAGAGAGAGAGAGAGAAAA chr4 - 94230402 89611970 89611969 89612044 4618359 4618358 4618433 75 ACATATA-ATATATA-ATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAA .:.....-.......-......x....-......x.x......::...x.:..............::.......x.. 7M1D7M1D11M1I49M 63/74 85.1% 75/94230402 0.0% 3/74 4.1% -32836584 -61393818 +3020 chr4 + 190214555 56782662 56782661 56782705 44 ATATAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAA chr4 - 94230402 3462454 3462453 3462497 90767906 90767905 90767949 44 ATATCACTTCCTTTTTTTTTTCTTTTTTTCTTTTTAGTACAGAA ....x.....:..........:.......:.....::x...... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 53320208 NA +6221 chr4 + 190214555 56794458 56794457 56794634 177 GCTAGTTCACCCCAGGTGAACCTGGTGGTCTCCTGCTCCCAGGAGGTCACCATATTGATGTCAAACTTAGTGTGGACGCCTGATCGACATAGCACAGTACAGCCCAGAACTCCTGGGCTCCAGTGATCCTCCTAGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCATGCGCCACTG chr4 - 94230402 18197032 18197031 18197204 76033199 76033198 76033371 173 GCTGTCTCTCCTCAGAC-AGCCTTGTGACCCCAAGCTCTCTGCAG-TCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTG ...:x:..x..:...::-.:...x...::.:.xx....:.x.x..-.......::..:x:x..::.....x.::x..::...x.:.:...x::::xx.........:.:..:.....:..x....x.:.x.xx:.........::.:.........:......--.:...:...... 17M1D27M1D117M2D12M 115/173 66.5% 173/94230402 0.0% 4/173 2.3% 38597426 NA +3236 chr4 + 190214555 56794784 56794783 56794829 46 CAAAAAAAAAAAAAAAAAGAGAGAGAGAGGAAGAAGAGGAAATTTG chr4 - 94230402 87676346 87676345 87676391 6554012 6554011 6554057 46 CAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTG ................:............::....x.:x....:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% -30881562 -63348840 +3223 chr4 + 190214555 56830522 56830521 56830570 49 ATCTCAAACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAA chr4 - 94230402 87676338 87676337 87676386 6554017 6554016 6554065 49 ATTCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAA ..::.x.x................:..................x:.x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -30845816 -63384586 +3033 chr4 + 190214555 56830525 56830524 56830578 54 TCAAACAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAA chr4 - 94230402 9490823 9490822 9490876 84739527 84739526 84739580 54 TCAAAAAAAAAAAATACAAAAAAGAGAGAGGTGGCAAGCAGGGAGAGAAAGAAA .....x........x.x.............:x:.x:..x.:.:.:......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 47339702 NA +3051 chr4 + 190214555 56830532 56830531 56830569 38 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAA chr4 - 94230402 37597028 37597027 37597065 56633338 56633337 56633375 38 AAAAAAAAAAAAAAGAGAGAGGGGGAGGGAGAAAGAAA ..............:......:.:...:.......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 19233504 NA +3018 chr4 + 190214555 56830533 56830532 56830573 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAAAAGAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............................:.:x..x:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -30845814 -63384588 +3709 chr4 + 190214555 56833026 56833025 56833086 61 CTTTCGGGTTCAAGTTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...::..........xx...x.xx.x........::...........:......x...... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 38635887 NA +3808 chr4 + 190214555 56854330 56854329 56854399 70 CTTCTGGATTCAAGCAATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTATAGGTGCCCACCATTATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .......:......::x...x..x.x........::.............:..:.x...--.....:.:.. 58M2D10M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 38657191 NA +4717 chr4 + 190214555 56871461 56871460 56871578 118 TAATTGCCTTTGATGTCT--GTTCTTCGGTCTTTCTCCCTTGCCTAACCCCTGTCGCTGTCAATTACCCTGGGAGGCTGCCCACAACAATGGAGACTATTGCCTCAGTAACAGCCGCCTA chr4 - 94230402 43528341 43528340 43528460 50701943 50701942 50702062 120 TAATTGGCTTTGATGTCCCCATTACATGCTCTCTCCTCCCTACATAATCCCTGTCGCTGTCAATTAGCCAGTGTCAGGGCAAACAACAAAGAGGGCTATTGCTTAAGAAACAACTGCTCA ......x..........:--:..x:x:.x...:..::..:.:.x...:..................x..x.x.xx:xx..xx.......x.::.:.......:.x..x....:.:..::. 18M2I100M 82/118 69.5% 120/94230402 0.0% 2/118 1.7% 13343120 NA +3752 chr4 + 190214555 56877739 56877738 56877821 83 CTGCAACCTCTACTTCCCAGGCTCAAGTGATTCTCAAGCTTCAGCCTCTCAAGTGGCTGGGACTACAGGCACATGCCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx.x:.:.::..:.......x...x..:.x:.......:......:.....:......x.::..--.....:.. 73M2D8M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 38680613 NA +3750 chr4 + 190214555 56881231 56881230 56881311 81 CTGCAACTTCCATCTCCTGGACTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGGCGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT-GCACCACTGT ..:..:.::xx.x..:....::.......x...x..x.x........::...........:.:....x..-..:....::. 70M1D10M 58/80 72.5% 80/94230402 0.0% 1/80 1.2% 38684105 NA +3137 chr4 + 190214555 56892296 56892295 56892357 62 TCTCAAAAAAAAAAAAAAAAAGTTATTCCAGATATTTTTTCATTATCTTTTTTTTTTTTTTT chr4 - 94230402 56617124 56617123 56617185 37613218 37613217 37613279 62 TCTTAAAAAAAAAAAAAAAAACATCTTCTCGATATTTCTTTATAATCACTTTGCCATTTTTT ...:.................xx.x...:x.......:..:..x...x:...x::x...... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 275172 NA +42284 chr4 + 190214555 56910699 56910698 56911541 843 AACATTGGAATGGCCCTGCCTAACGACATGTATGACTTGCATGACCTTTCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGCAAATGTGGCCTTAACTGGGGAAGTAAATGGCAGCTGCTGTGATTACCTGGTCGGTGAAGAAAGACAGATGGCAGAACTGATGCCGGTTGGGGATAACAACTTTTCAGATAGTGAAGAAGGAGAAGGACTTGAAGAGTCTGC-TGATATAAAAGGTGAACCTCATGGACTGGAAAACATGGAACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTCA--GCCTGTATTTGAGGCATCAGGTGCTCCA---GATATTTACAGTTCAAATAAAGATCTTCCCCCTGAAACACCTGGAGCG------------GAGGACAAAGGCAAGAGCTCGAAGACCAAACCCTTTCGCTGTAAGCCATGCCAATATGAAGCAGAATCTGAAGAACAGTTTGTGCATCACATCAGAGTTCACAGTGCTAAGAAATTTTTTGTGGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTGGCTCTTCCACTGCAGAAGAGGGAGATTTCTCCAAGGGCCCCATTCGCTGTGACCGCTGCGGCTACAATACTAATCGATATGATCACTATACAGCACACCTGAAACACCACACCAGAGCTGGGGATAATGAGCGAGTCTACAAGTGTATCATTTGCACATACACAACAGTGAGCGAGTATCACTGGAGGAAACATTTAAGAAACCATTTTCCAAGGAAAGTATACACATGTGGAAAATGCAACTATTTTTCAGACAGAAAAAACAATTATGTTCAGCATGTTAGAACTCATACAGGTAAG chr4 - 94230402 43534335 43534334 43535183 50695220 50695219 50696068 849 AACATCGGCATGGCGATGTCCAACGACATGTATGACTTGCACGACCTTTCCAAATCTGAACTGGCGGCCCCGCAGCTGATCATGTTGGCCAACGTGGCCCTGACGGGAGAGGTGAACGGCAACTGCTGCGATTACCTGGTGGGAGAGGAGAGGCAGATGGCCGAGCTGACCACGGTGGGCGACGGCAACTTCTCAGACAGCGACGCGG----AGGGCGTGGAGGATAGCCACGCTGTGGAGAGCGACCGTGACGCCCCGGAAAACGTGGAATTGAGCTCTCTGGAAGCACCCGGTGTGGAAACCCAAGGCCCG-----GACGCTT---GTCCCCCACCTGAGACTCCCAGCACGGACAAAGATGTCCCGTTGGAAGCTCCGGGAACTCCGGAAAGCTCCGAGGACAAGTGCAAGAGCCTCAAGAACAAACCTTTCCGCTGCAAGCCCTGCCATTACGAGGCCGAGTCTGAAGAGGAATTTGTGCACCACATCAGGGTTCACAGTGCTAAGAAGTTTTTCGTGGAAGAAAACGCGGAGAAACAAGTGCAGGTCAAGGAGTCGGATTCCTACAGCGCGGAAGAGGTGGACTTCTCCAAGGGCCCGATCCGCTGCGATCGCTGTGGCTATAACACTAACAGATATGATCACTACCTGGCTCACCTGAAGCACCACAACAAGGCGGGAGAAAATGAGAGAGTGTACAAGTGTACCATATGCACTTACACCACCGTCAGCGAGTATCACTGGAAGAAGCACCTGAGAAACCATTTTCCCAGGAAAGTATACACCTGCTCGCAGTGCTCCTATTTTTCAGACAGGAAAAACAACTATATTCAGCATATTAGAACTCACACGGGTAAG .....:..x.....xx..:.:....................:............x..........x..x..x.....x..:...:....x..:......:.:..x..:..:..:..:....:......:...........x..x..:..:..:........x..:....:xx....x..x..:::......:.....:..:..x.x:.----...:.x..:..::.xxx.-:.x.:.::.::.:..x.x.x.:.xx.:.......:.....:....xxx.:.....x:xxx..x:..:...x.:..--...:.-----..x..x.---..x.:...---..x.:.:x...:x.::.:......x.:..x::x...:.x..x...:.x------------........:x........::x....x......:..:.....:.....x.....x..:..:..x..:........:x.:........:........:.................:.....:........:.::..:.....:..:.::x.:.:..:...:..x.::..:.x..x:..:.......x:..:..............x..:.....:..:.....:.....:..:.....:x.............:x::..x........:.......x..::..x..:..x......x....x..........:...x.....x.....x..x..x................:...:..::.:..............x..............x..:xx:x.:...xx...............:........:...:........:..........:..:...... 208M4D18M1I75M2I5M5D7M3D8M3I48M12I462M 625/831 75.2% 849/94230402 0.0% 30/831 3.6% 13376364 NA +3726 chr4 + 190214555 56913724 56913723 56913806 83 CTACAACCTCCACCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCCAGTAGCTGGGATTATAGGTGCCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .....:..:xx.x..:.::........:.x...x..x.x........::.x.........:.:..:.x...--......::.. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 38716598 NA +6149 chr4 + 190214555 56919779 56919778 56919879 101 TTTTGCAGGAGAACGCCCATATAAATGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTCATCTAACTAGACATATGCGTACTCATTCAGGTTGGTAAG chr4 - 94230402 43539430 43539429 43539530 50690873 50690872 50690973 101 TTTCACAGGAGAGCGACCCTATCAATGTGCTATGTGTCCCTATTCCAGCTCTCAGAAGACCCATTTAACCAGGCACATGCGCACCCACTCAGGTTGGTAAG ...::.......:..x..x...x......xxx.x.....:..:..x..:...........:...:....:..:..:.....:..:..:............. 101M 79/101 78.2% 101/94230402 0.0% 0/101 0.0% 13380349 NA +3090 chr4 + 190214555 56928505 56928504 56928564 60 TCCTGGGCTTAAGTGGTCCTCCCGCCTTTGCCTCCCAAGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197140 18197139 18197199 76033204 76033203 76033263 60 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.....:.:.....x.:.x.xx.x..:x....::...........:...:..x...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 38731365 NA +36225 chr4 + 190214555 56929835 56929834 56930654 820 CTTCAGGTGAGAAGCCATTTAAATGTGATCAGTGCAGTTATGTGGCCTCTAATCAACATGAAGTAACCCGCCATGCAAGACAGGTTCACAATGGGCCTAAACCTCTTAATTGCCCACACTGTGATTACAAAACAGCAGATAGAAGCAACTTCAAAAAACATGTAGAGCTACATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGTAATCTACAGTATCACTTCAAATCTAAGCATCCTACTTGTCCTAATAAAACAATGGATGTCTCAAAAGTGAAACTAAAGAAAACCAAAAAACGAGAGGCTGACTTGCCTGATAATATTACCAATGAAAAAACAGAAATAGAACAAACAAAAATAAAAGGGGATGTGGCTGGAAAGAAAAATGAAAAGTCCGTCAAAGCAGAGAAAAGAGATGTCT---CAAAAGAGAAAAAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAAGAGATGGATGTGCATACAGGAAGCAATTCAGAAAAATTCAGTAAAACTAAGAAAAGCAAAAGGAAGCTGGAAGTTGACAGCCATTCTTTACAT---GGTCCTGTGAATGATGAGGAATCTTC-----AACAAAAAAGAAAAAGAAGGTAGAAAGCAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAA---TAAAAAGCAAAATACTTGCATGAAAAAAAGTACAAAGAAGAAAACTCTGAAAAATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGAAGGA chr4 - 94230402 43543946 43543945 43544759 50685644 50685643 50686457 814 CTTTAGGTGAGAAGCCATTCAAATGTGATCAGTGCAGTTACGTGGCCTCAAACCAGCATGAAGTAACTCGTCATGCAAGGCAAGTTCACAATGGGCCGAAGCCTCTGACTTGCCCGCACTGTGACTACAAAACAGCCGATCGCAGCAATTTCAAAAAGCACGTTGAGCTCCACGTCAATCCGCGCCAGTTCCTTTGTCCTGTTTGTGACTACGCGGCATCTAAGAAGTGTAACCTGCAGTATCACATCAAATCCAGGCATCCCGATTGTTCGGACATCACCATGGATGTTTCAAAGGTGAAGCTACGG---ACTAAAAAGAGCGAAGCTGACTTTTCCGAGAGCAT---CAGTGACAAAGTGGAGAAAGAGCAAAC------AAAAGGGGATTCGCCCACAAAGAAAACTGAGAAAACTGTGAAAGTGGAGAAAAAAGAGAACTTGGCAAAGGAAAAGAAGCCAACGAGCAATGTTCCTGCACGTCAGGTTACGACCAGAAGTCGGAAATCGACTTCAGAAAACAAGGAGGTAGATATTAAAACTGAGAAAAATACTGAGAAACCCTGCAAAACAAAGAAGGTCAAAAGGAAGGCAGAGGCAGAAATAACTTTCTCAAAGGAAGAGCCTGCGAACGAT-----ACCATCGTAATGACAAAAAAGAAAAAGAAAGTGGAAACTAAACCCAGA---GACTGTCAGGAAGCTCAGAAAAGTGATGATGTACCAGAGGCGGAACCTAAAAAGCAAAATTCCTGCCTGAAGAAAAGCAGGAAAAAGAAAGCTCTGAAAAGTAAGCACAGTAAGAAAAGCAGTAGACTTGATGAGGAGAA ...:...............:....................:........x..:..:...........:..:........:..:..............x..:.....x.x......:........:...........x...x.x.....:........:..:..x.....x..:..x..:..:..x......xx...:.....x........:..:..x..:...........:..:.........x.......:.:......::x....:.x:.:.xx..x........:.....:.....:...x:.---..:.....:x.x..:........x:.:..x.::..---..:...x...:::..:.x...:.....------..........x:.x.::x........x...:..:x.:..x....::.......:...x:x..---....:..:..:.....xx.x.::.....x:.x.::xx:.....x..x.......x...:.....:::xx....::xx..:...:.:...:.xx.x..x.::.:x...x.x..:...::.x.:.....x.....::x..........x::..:.:x..x.xxxx..::.:.x.x---.:x....:...:...-----.:.x..-----:.................:..:....x:...:...:.---:.:x.........:x.x:..::....:::::x.x::....x.:.---.............x.:...x....:.....:.x:..:......:.........:...::xx................::.:.xx.x..:..:. 308M3D35M3D27M6D62M3I173M3I15M5D6M5I37M3D44M3I93M 583/800 72.9% 814/94230402 0.0% 34/800 4.2% 13385889 NA +19627 chr4 + 190214555 56931808 56931807 56932980 1173 GCAGTGTCCAAAACT-GCACTGGC---ATCACCTCCTGCTACAATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAAAATGCAAAGGAAGCCTTGGCAGT--CAAAGCGGCTAAGGGAGATTTTGTTTGTATCTTCTGTGATCGTTCTTTCAGAAAGGGAAAAGATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA-AACTTTGAACAAGGTTTCAGTTCTTAGTTTGTAAGGTATATTACATTTTATATTCATTTATGATAGCAGACAACCTTTT------AAGATTGCTTTAATTAGTATCTGA--------TGTTGATTTTTAAG-TGGCATTCTTTTCCTTAGGACTTTTTATGTA--TACCT-GTTGATTGTTGTGTAAATT--TTAGTAAATCTAAGAGAGTGTACTAA-------------------ACCAGCAGGTA-TCTGTTAGCTTATGTGTTT--------AATTGAAATT-----AGAAGGCT----------------AAGATGG-------TATAACAGCATTTTATTGCTTTGTCCAGCTACAACTTGTCATTTTTTTCTCCATGTCTTATCTTCCTGTTTCACTTTAGTTTAT------TCTTCGTTTTT----TATTGAGATCTATAAAAAATTGGCTTACTTAATAGCAAATTACTTGAAGAATTTGCCTGCTTTATATAAAGTTAGCACTT--TAAGATTTTT-----TTTTTTAGAGATGAG-----------AAGACATTTAAATTGAAGAA----------AAATTCCCCCAGCAATAGACAGT----------------CTATCAGTCCAAGTATTTACTT------CCTGAGTTTTGATCAATATTTTTTATTTGTGTATGTTAATCGTCATAAAAAC----------------AGTGATTTTGGTGT------GTTTTTTATT--------TTGGTGCTTTAATGGCTTAAGATGTTGCACATTTTTTTTTTCTTTTGGTTTCTGTTTATGTTTTTTTGCCTATGCAGTTAAATTTTTCCTAGAAATAGCATTTGTGTTGAACAGTAACACTTTATACATATATATATGCATGTTTATTTTGTTTGGCGT------------CTTTGGAGGGATGCTTTTAGAC---TTGTTTGCAAAAGGGCAGTTTTCT----TTTTCTTTGCTGCAGTTGTCTATTTT chr4 - 94230402 43545300 43545299 43546588 50683815 50683814 50685103 1289 GCAGAGCCCTGAAGTAGCTCTGGCCTTATCACCTCTGGATAACGCAGCAGCGAACGAATCTCAGGAAATGGATGAGGATGAGGGCATCCACAGCCACGAAGGCAGCGACATAAGTGACAACATATCAGAAGGCAGCGATGATTCGGGGTTAAATGGTGCTCGCTCTGTACAAGAGGAAACCAGTCCGAAGACATCACAAGGAGC--TGCCAGTAGCACAGCAGTCAGGGAGAACTATGTGTGCATTTTTTGTGACCGCTCATTTAAGAAGGAAGGTGAATACAGCAAGCACCTCAATCGCCACTTGGTCAATGTGTATTATCTTGAGAAGGCAACAAAAGGGCAGGAGTAGAAATAGCTGTGGTTTGGGGGCATGTGTATCTTTTGTAAGATCTTATACAGCTTATGTACAGATATTGTAG------ATTTTTTTTTTAAAGCATGGTTTTCTTTAGTGTCTGCATTGGGATTTTTTTTTTTTAAGCTGAAAATATTTT--GGACAACTTTTCGTGTAATGACCTCTTTAAATATTGGATCTCTTCATTAAAGAAGTAGGTAGGGTGTATGAGGCTGTGTCCTGTAAGGTCTGCCTGCTTATAGTTTGTTAGCTGATGCATTTGTTTTATAAGTTGAGCTTTAGGAACAAGGCTGTAGCTACCCATACACAAGTTGGATGTTTATAGAGCCCCTGGCAGTTGCTTTTTCTTGTAGCAGCCAACTCCTCTTTCC-------CCTCTCCTCTGCTTTTGTTTTAGTTCGTAATGTATCTTAGTGTTCAAAGTGGGAAGAACTACTCAA---TGCTTTTTCTACCAGGAAGATA------------GCTTCTATTACATAAAA-GAGCACTTTGTAAGACATATAGAAGTTGGCTAGTGATGAACGTAACTGTTTAAGATAATTATAATTGTGAACATACATTTCAGATCCCCTTAGT-ATGAACAGTGAGCCAAAATTTAGGGCTAGTCCTTCCAACTTTTGTTTGGAGAACCTCTGTCTTGATTAATATCTTAT-----TAACTGTTACGTGTCGTTGACTCTGTTGTGGGGGGGGGGAGCAAGTTTGTTGTTTCCAAGTTTTTGCTTTGTTGTTGTTGTTGCTTTAAAGGCTTAAAATGTTGCACATT--------------GTTTCTGTTTA--------TACCTATGCAGATAAATCCTT--TAGGAATAGCGCTTGTGCAGTACATGTACACTT--------TATATATGCATGTTGGGTTTCATTTGTGTAAGCTTTTCTTACTTTGAA-----CCATTCAGATTCGTTGCTTACCATGGGCCAGTTTCCTGTGATGCTCTTTACTGCAGATTTTTCTTCT ....x.:..x:..x.-..x.....---........:x.x..xx:::.....:..:..:...........x.....:.....:..............:.....x..:...x.............:.....:..:..:........x..:..:x....x.....x:.x..x.x.x.:...x.:..:xx:..:.xxx..x.:.:...--..x....--..x...:.::.:..:::.:.x...x..:..:..:.....:..:..x..:.::....:.::x..x........:..............:.....:........:........::.:...:.xx.............:x:.-.:..x..:x:x:..xx:xx..x:x.xx........:.x.xx....x:....:.x..xx...x:...------.::....------.:x..x.:...xx.....:....x--------.x..xx........-..:x.x.x....--xx.x:......::....--x....-x..:.x.:...x:.xxx..--...:x:..x:x::x..:.....:x.:-------------------:..x..xx:..-.:........x...::...--------.:....:x..-----.x......----------------...x...-------..x.:.xx.xxx:x:.......x..:x.:x:..:.:x:::x:.:...:.-------.:.x..:..:xx...:::.......::.------....x..x..:----.:xx:...x...:xx..---..x:..x::..x:..x..:x..------------..:.x:x...:.....:-x.......--.....:x.x.-----..xx:...x.....:-----------....:.x...x.x.x:x...----------.:..:...::..:-..::.....----------------...x:xx.:.x.::x...::..------...xx..:.....:.....:..x.-----.:xx.....xx:...:.x:.xx.----------------..::.x....x...------......xx..--------...x........x.......:............--------------...........--------.:.........x.....::..--...:......::.....:x.x...xxx......--------..............x:x...xx..x.:..------------.....:.-----x.x..:...:---...:..:.x.x:..x......:..----.x:.....:......x.x.:.x..:. 15M1I8M3I177M2D7M2I139M1I66M6D7M6I24M8I14M1I12M2D17M2I5M1I19M2I26M19I11M1I19M8I10M5I8M16I7M7I49M7D28M6I11M4I17M3D22M12D17M1D8M2I10M5I15M11I20M10I13M1D9M16I22M6I24M5D23M16I14M6I10M8I33M14D11M8D21M2D33M8D29M12I7M5D10M3I24M4I26M 752/1097 68.6% 1289/94230402 0.0% 268/1097 24.4% 13386508 NA +5759 chr4 + 190214555 56934007 56934006 56934246 240 TGACTGGGAGGCCAAAGATTTAAAGAAGCGGAAGATTCTTCTCTTAAGACATGAGGAGTAAGTTGTGTGATAATGGTATGTGTTTTGTGTGCATGAATGGACATTGTAAATGTTGAATTCTAGGCTCCGACAATCATTGTCAACAGAAGATCAAGCTGCAAATATTTATGTTTTAAAACTTAA-ATTATAAAGCTAGTTAAGTCTTTCT----AATGACTAGTTTTAATGTTCATGGGTACATTT chr4 - 94230402 43547618 43547617 43547843 50682560 50682559 50682785 226 TAAATAGGAGGCCAAAGATTTGAGAGGGAGGG-----CATCCCTCGTGGCG---GAAATAAATTGT------ATAGTGAGTTTTTTGTTTGCTTAGATAG-CATT--CAATCCTTA--CCTTGGCTGTGACAATCATTGGCAACTGAAGATCAAGTTGCAACTATATTTATGCTAAATGTTAAGAAAAGAGACTTAGTTGAGTTGTTTTCCTAAACAACTGGTTGTAATAGTCTTAGGTGTATTT .:.x.:...............:.::::.x..:-----.x..:..::x.:.:---.:.:...:....------..:..:x..x......x...x.::..:.-....--x...x:.x.--:..x....x:...........x....x..........:.....x...x.x.:.x:....xx....-.xx.x.:.x:.....:...:x..:.----..::...:...x....:x..x.:...::.... 32M5D14M3D12M6D28M1D4M2D9M2D65M1I25M4I32M 153/221 69.2% 226/94230402 0.0% 24/221 10.9% 13386389 NA +13268 chr4 + 190214555 56935329 56935328 56935835 507 TTGACCTCAGCAGATGAAGTGAA--CAGATAGTGTTAATTCAGATTGAAGAAATTATCTGAATCTTGGTTTGTGTAGATTTACAATCTACATGCAATATTAACTAAATC-AGATAGCTTTTACAGTT-TCACATGTGTACATAGGTTCCCTCCCGGTCCCTTCCATATCCAT--TAGTTATTGAACTTTCTAAACTGGCATTGAAACATTACAACAATGTTTTGTTGCACCAATTTTATAAACTTAAGCAGTGCAATACGTGTTACTTTTCTGAGGCAAACCAAAGGTAAATTTCTCAAGGTTCTTGCTGCCTTCTTTAGCAGCATTTGATGGAAGATCTTTTATACATTTGTAATAGATA-AAAATAAACCAGATTGCAAATCCTTTTTTAAAATCCTAAACCATGTACCAAGTTTTTGGTCCAAATTATGTAGGATAAGTTAAACTTAAATTGCATTCTATTAACCAATATGAGTGTATTTCTGTAAGCATAGTTATGTTGAAATAAAGTTT chr4 - 94230402 43548944 43548943 43549422 50680981 50680980 50681459 479 TTGATTTCAACAGATTTAATATAGCTGAAAAGTATTAACCCA-ATTCAAGAGGTTTCTTGAATGGCAGTT-GTGTAGATACGTGG----CATGCA-TATTAACAGAATCCAGAGAGCTAATGGAATTGTTTCATGTGTACATACGTTTCCTCCC-------TTTAAAACTATCCTAGTTA---ACTTTTGTAAGCTGGCATGGAGTTGTGTTTATGACATTTGGTTGCACCATGTTTG-ATGCTTTTACAGTGCAATACTTGT--ATTCTCTGAATAAAACCAAAGGTAATTT------GTTTTTTCATGTTCTCTACTGTAGTGCATGATGG----CCTTTTCTACGTTTTTAATAAATGTAAAACAAGCCAGATCATACATCCTGTTTTCA---CCTAAAGTATGTTTTAAGTCTTTTGTTCAAA--ATGTAGTGTAAAGTTAAACTAAATTGCATTATATTAACCTTTTCAAGTGTATTTTCCTAAGCATAGTTCTGATTAAATAAACTTT ....::...:.....xx.:.:x.--:::.x...:....::..-...x....::..x::.....xx::...-........x:::::----......-.......x:....-...x....xx.:x.:..-.:x............x...:......-------.::.x.x.:..--......---.x:...x...:.......x..:x::.xx:x.::.::...x.........xx...:-.x:...xx:...........x...--x..:.....:xx.............x..------.x..:..xx..:::...x:x.:..:::x......----:.....x...:...x.....:..:-....:..:......:::.x.....x....x.---......x:....x::....:...x..:....--......x:...:x.x..x:...........x........xx.x::.........::x...........x..x.x.......x... 23M2I17M1D27M1D14M4D6M1D13M1I17M1I26M7D11M2I6M3D55M1D24M2D28M6D34M4D24M1I31M3D31M2D85M 334/472 70.8% 479/94230402 0.0% 42/472 8.9% 13386385 NA +6697 chr4 + 190214555 56963476 56963475 56963663 188 TCCTCACGTTGTACATAAGGGAAGGAGGCTTCTTGGTTTTATAGGCCACACTTTTCTTGATGCGCTGTCCTTTGATGTTAACAATATATGGCAAGAGAGGGGG---CCGGACGGTCAAAACTGTTCCTTCAGGTGTATAGCCTCGGAGATGCAGTCTGTCCTTAAAATTAGGTGTTACTGAAACCCAACCT chr4 - 94230402 43552692 43552691 43552882 50677521 50677520 50677711 191 TTTTCAAGTTTTCTACGAGGGAAGGAGGCTTTTTGGTTCTGTAGGCAGCAGTACCTGGGATCCGGGCCCCTCTGATGTTACTGATATATGGTAAAAGGGGAGGCTCCCGTACCACCACTGTGGTGCCCCTGGGCGTATAGGCTCGGAGCAGCAGTTCCTCTTCTGCATGAGCTGTCACTGCCACCCAGCCT .::...x...x.x:.::..............:......:.:.....x:..x.x:::xx...x..xxx:...:........x::........:..:..:..:..---...x..x::..xx::x..x..::::..:......x.......xx.....::x..:.:x:x..x..x...:....xx.....:... 103M3I85M 123/188 65.4% 191/94230402 0.0% 3/188 1.6% 13410784 NA +6729 chr4 + 190214555 56964399 56964398 56964560 162 AAATTACCTGCAGAGGAAAACTTGATGTCGGCCACTGCTTCAGATGCCCCCAGTCCTTCTTTTAACATAATGTCTTCAGCAACAAGAGGAGGAAATCCTGCCATTCGTTCTTTTCCACCCATTGGAATCTTCCAATGAAATA--AAGATATTTACAAGTTCAAA chr4 - 94230402 43552965 43552964 43553125 50677278 50677277 50677438 161 AAATTACCTGCAGAGGAAAGTTTGATATCTGCAACTGCCTCAG-TGGTACCAGTTC--CTTTCAGTGTAATGTCCTGGGGGACGAGTGGGGGGAACTCTTTCATTCGCTCTTTCCCACCCATTGGAACCTAATGTCAAAACAGTAAAAGATTTAACAGCTAAGA ...................::.....:..x..x.....:....-..x:x.....:.--....:.:::.......:.x:.x:..:..x..:..:..::..x:......:.....:.............:..xx::x::...:.--..:.x.....xx..:.x.:. 43M1D12M2D84M2I20M 114/159 71.7% 161/94230402 0.0% 5/159 3.1% 13411434 NA +3036 chr4 + 190214555 56966012 56966011 56966057 46 AATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCTGTT chr4 - 94230402 2943234 2943233 2943279 91287124 91287123 91287169 46 AATTATCTTTTTTTTTTTTTTTTTTTCCTGAAATTGAGACTCTTTT ....x.....................::...:..x...x....x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 54022778 NA +3182 chr4 + 190214555 56967993 56967992 56968074 82 CTGCAGCCTCCGCCTCCCAGGTTTAAGTGATCTTCCTGCCTCAGCCTCTCTAGTAGCTGGGATTACAAGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.....:xx:x..:.::....:.....x.::x.xx.x........:..x.........:.:....x...-----...... 71M5D6M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 38770867 NA +6725 chr4 + 190214555 56973850 56973849 56974041 192 ATGCTTACCTACGACATAACCATGCTTTTTGAGGACATTAAGCTGATTTTGTTCTTGCTCACTAAGATCTTCTTCAGCTTGAGTTGAATCTTTTTTAAGTCTTTGATGCCTTTTAAACATTCTGTAAGGAGTTGGGTTGCAAATAGGAAACTTCAGAAGGTTTAATGTAGTACCTGAAATACACAGAATAAA chr4 - 94230402 43556216 43556215 43556407 50673996 50673995 50674187 192 ATACTCACCCACTAAGTAGCCTTGCTTTTTAAGGCGATTAAGGTGCTTCTTTTCTTTATCGCTTAGCTGATCTTCTGTTTTTAGTGCCTCTTCTTTCAGCCTCTCCTGCCTTCTGAATATCCTGTCACACGTAGGGTTAATAATTGGAAATTTCAACAAGTTCAGTGTTGTTCCTGGCAGAAAAAAAAAAAA ..:..:...:..x.x:..:..x........:...xx......x..x..:.x.....xx..:..x..x.xx.....x.:..xx:x..xx....:...x..:..:.xx......:.:..:..:....x.x:x..x.....:xx...x.....:....:x.:...:.:...x..x....:x.x.x.x.:..x... 192M 128/192 66.7% 192/94230402 0.0% 0/192 0.0% 13417634 NA +23018 chr4 + 190214555 56976437 56976436 56977418 982 CTCACCTGGCCAAGGGGAGATGGTGGCTCTGTCGATGGCCTCGGAGCCCTTGGCAGTGCAGTAATCGGACTCCAGGAGCGTGTTAAAGAGAGTGGATTTGCCGGCGTTGGTGGCGCCCACTAAGTAGACGTCCCCACGGTAGCGCCAGGAGCGCTGAAGGGCAGAGATCAACTCTTCCACTCCATAGCCGGTCTTGGCGCTGATCAGCCGCACGTCCCTGACCACTGTGCGGGACCAGTTCGGCGGATTCGGATTCTCCCCGTCCTGTGGCTCGTCCTTGACGGGGCGCTGTGGCCCTTGGTGGCCAGGGGCCAGCAGGAGCCCGGCGCGGGCACAGTCCTCCCACAGTCGCTCCCGCAGCCTCTGCCGGTAGCCAGGAGCATCCTGGGGCAGGAGGTCCACTTTGTTTCCCAGCACGATCAGCT------------GCTTGGGGCCCACCAGCGCGGGCAAGTCGGGCAGCAGGGCGTCGGGCAGGTCCAGCAGGTCCACCATGTA---GAGCACCAGGGAGGGGCCGGGCCG---------CCGCAACGCGGCGCTCACCAGCTCCAGGTACTGCTCGCGGCTCACCTGCAGGCGTAGAGCGCGCCGGTGGTGCGACAGCAGCCAGCAGCGCTGGCACACGGTCCGTGCCAGCCC------GCCGTCTGCCTCCGC---CGTGCGGAGGAACTTCTCTCGGGGCAGGTAGCCGGGCACTCCGGCGTCCTGGCAGTGCAGCTCTGCCCCACAGCCCGAGCAGTTCACGCCGCTGGGCGGCAATGCCGGGTCCGGGTGCCCCACGACCGGGTGCTCCCGGGACCTGGCCCGTAGGTTTTGCTGTCGCCGCTCCT-CCCGCCGCTGCTGCCTCTGTC--GCTCCTCCTCCTCCTGCTGTTGCTG-GAGCTCCTGCAGCTGCTTTTCGCGGGTGGGTTGCGGCTCCGGATCCAGGATGTACTCCGGGAACAGA-AAACGCTCCTGCATGTCACCACCTTCTCCAAAGCCCTCCGTGTCCACG chr4 - 94230402 43557288 43557287 43558186 50672217 50672216 50673115 899 CTCACCTGGCCAGGATGACACGGTGGCCCTGTTAACCACGTCGGGGGCACGCGACTTGCAGTAGTCGGAGAGCAGCAGGGCGTTGAAGAGCGTCGACTTGCCCGAGTTGGTGGCCCCCAGCAGGTAGACGTCGCCGGCGCACTTCCAGGAGCGCTGCAGCCGGCTGACCAGCCTCTCTATCCCGAAGCCCGTCTTGGCGCTCACCAGCCGGACATCC----------------ACCAGCT-----------------------------------------------------GCGCTCGGGAGATGCCGGCCTGCAGG---------------CAGGCAGCCGTCACCCTCTGCCGCAGCCGCCCCAGATGCCCGGGGGAGTCAGCCGGCAGCAGGTCCACCTTGTTGCCCACCACCAGCAGCCCCGCGGCGGGCACCTCGGGGCTCAGCAGCGCGGGCAGTTGGGGTAACACGGGGTCGGGCAGCTCCAGCACGTCCAGCAGGTAGAGGAGCAgcgggccgcggccgtgccggggggggctgcggagcgcggcgcTGAGAACCGCGCGGTGCTGCTCGGGGGGCAGGTCCAGGCGGACTACCCGGCCGCCGTGCTCCAGCACCCAGCACCGCTGGCACACGGCATCCCGCAGCCCGGCCGTGCCGTCCGGACCCGCGCACAGGCTGCGGTACTTGTCGGCCGGAACGAAACCCGGCGCCGCGGCGTCGCGGCACTGCAGCTCGGCCCCGCAGCCCGAGCAGCCCACGCCGCTCGGCGGCACTGACAGGTCGGCCACCCCCCGGACCCGGTTCCCCT---------CCCG-----------GGCGCCGTCCCTGCCCGCCGC--CCGACTCCGCACGGCCTCTCTGCCCCTCGCCGAAGCGGCGGGCGGCGGCAGCAAT---------GGCGGTGGCGGCTCCGGCTC------GTACTCGAGGAAGACATAAGCGCTCCTACTCGCCGCCCGCCGTCGCAGCTCGTCCCAGGTCCACG ............:.:x..x.:......:....::.:x:.x....:.x.x:xx.xxx.......:.....xxx...x..x.:...:.....x..x..:.....x.x.........x....x:.:.........x..:xx.:.x:x............x..xxx:xx..:..:.:::..:.::..:x....x...........x.:......x..:...----------------.....:.-----------------------------------------------------..x..:..x:.x::xx....x.....---------------...x.xx..xx..x:.x..x........x.:x.x.:.:x..:..:.x:..xxxx.....x........:.....x....x...x.x....:------------x..:.....:..x...........:x.x...:.:..x..x.........x.......x.....x..x...---.....x.:..xx.x.....x....---------x..x.:.........x.xx.x.x.xx...:.......x..xx..xx.x......x.xx:.x..x.x.:x....xx.....x......x.............:x:x:xx......------......:.xx:....---.:x..x.x..x....x..xxxx..x.x.x.:..x...:.:x.......x:....x........x.....:............::.........x.......x..x.:....x.xxxx....xx....x...x.:..:---------....-----------.x.....::...-........--.:.x...:.:x--..::...:x..:.::..:.xx..x.-.:..xx.x.....x::---------.xx...x..........x..------......x:....x.x.-..:.......:.x:.:.:..xx.:x::x..:xx.x::..:x....... 217M16D7M53D26M15D91M12I70M3I24M9I114M6I15M3I137M9D4M11D12M1I8M2D11M2I25M1I16M9D20M6D16M1I48M 594/861 69.0% 899/94230402 0.0% 159/861 18.5% 13419149 NA +5787 chr4 + 190214555 56986351 56986350 56986430 80 CAGATATGCAATATGATGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAA chr4 - 94230402 43558992 43558991 43559071 50671332 50671331 50671411 80 CAGATATGCAATACGATGAAGACGACGACGAGATCACCCCCGATCTGTGGCAGGAGGCGTGCTGGATTGTCATTAGGTAA .............:.....:..:..:..:..:........x...:.......:..:..:...........x..:...... 80M 67/80 83.8% 80/94230402 0.0% 0/80 0.0% 13427359 NA +11440 chr4 + 190214555 56990739 56990738 56990903 165 TTTTCCCAGTTCCTATTTTGACGAGAAAGGCTTGGTTAGACAACAGCTGGATTCTTTTGATGAGTTTATTCAGATGTCTGTTCAAAGAATTGTGGAAGACGCTCCTCCTATAGACCTACAGGCTGAAGCTCAGCATGCTAGTGGAGAAGTTGAAGAACCGGTAAG chr4 - 94230402 43561637 43561636 43561801 50668602 50668601 50668766 165 TTTTTTTAGCTCCTATTTTGATGAAAAAGGTTTAGTCAGACAACAGCTGGATTCTTTTGACGAGTTTATTCAGATGTCTGTGCAGAGAATTGTTGAAGATGCTCCACCGATTGATTTACAAGCAGAAGCCCAGCATGCCACAGGAGAAGTGGAAGAACCAGTAAG ....:::..:...........:..:.....:..:..:.......................:....................x..:........x.....:.....x..x..x..::....:..x.....:........:.xx........x........:..... 165M 138/165 83.6% 165/94230402 0.0% 0/165 0.0% 13429102 NA +20777 chr4 + 190214555 56994388 56994387 56994892 505 TTTTGTTTAATTTCAGCCACGATATTTGCTGAAGTTTGAACAAATTTATCTTTCCAAGCCTACCCATTGGGAAAGAGATGGTGCTCCTTCACCAATGATGCCCAATGAAGCTAGATTAAGGAATCTCACGTAAGAAAGAATTTT------------------------------TCCTTGTCAGCAGTAGATA-------CTGAAATAG-AATTTTGAAAATGTAATTTTAACCACTTGAGGATTTGTTTTAA-----------------CAGATACCCT------ATTGCTTAA------CTGTGA-------------------------TCTAC--------------------------------------TTTTATTTTCAAAGGTATTCTGCTCCGCTTTATGTTGATATAACAAAAACAGTCATTAAAGAAGGTGAAGAACAACTTCAGACTCAGCATCAGAAAACTTTTATAGGAAAAATTCCAATTATGTTGCGGTCAACTTACTGCCTTTTGAATGGCTTGACAGATCGTGATCTTTGTGAGTTAAATGAATGCCCTTTGGATCCTGGTGGCTATTTCATTATTAATGGATCAGAAAAGGTATAGTAACATTATTTTAAAAAATT chr4 - 94230402 43564244 43564243 43564868 50665535 50665534 50666159 625 TCTTGTTT---TCCAGCCCCGGTATCTCCTGAAGTTTGAACAAATCTATCTCTCCAAACCTACGCACTGGGAAAGAGATGGAGCACCATCACCTATGATGCCCAATGAAGCCAGGCTGAGAAACCTTACGTAAGAAACATCTCTGTGATGGTTAGAACACAAGGAAGGACTGGCTCTATGTTATTAACCGATAGTCTTTTTTTATTTAGTCATTTTGACAATGTAATCATTACTGCTC------TTATTGCAATTTCTAATCATTAGATCCAGATGACTTGATAATAATGCTCAATATTACCAGTGAGTAGAATAATTGCATTTGTCAGCTTTCTGCACAGGCTGGAGTAGTAACTGATAAACAACACAATGGTATTTTTCTTCTGTAGGTATTCAGCCCCCTTGTACGTGGATATAACTAAAACAGTTATTAAAGAAGGGGAAGATCAGTTACAGACACAACATCAGAAAACTTTTATAGGAAAAATTCCCATTATGTTACGATCAACGTACTGTTTGTTAAATGGCTTAACTGACCGTGACCTTTGTGAACTGAATGAATGCCCTCTGGATCCAGGTGGCTATTTTATCATTAATGGATCAGAAAAGGTA-AGGGATGATACTTTGCATAGTT .:......---.:.....x..:...:.x.................:.....:.....:.....x..:..............x..x..x.....x.................:..::.:..:..:..:..........x.x:.:.------------------------------..:x...:.x:.::x....-------:.x.xx...-x.......x........:x.x..::..:------..:..x:..-----------------.....:x.:.------.x....:..------.x....-------------------------...:.--------------------------------------....x:..:::x........x..:..x:.x..:..x........x........:...........x.....x..::.x.....x..:.............................x........:..:.....x.....::.x..:........:..x..:.....:........::.:............:.......x...........:..:.....................-..x:.::x..:...:x.x.:.. 8M3D133M30I19M7I9M1I28M6D9M17I10M6I9M6I6M25I5M38I237M1D22M 388/495 78.4% 625/94230402 0.0% 140/495 28.3% 13430144 NA +12963 chr4 + 190214555 56995233 56995232 56995414 182 TTCTTATTGTCCAAATAGGTTCTGATTGCCCAAGAGAAAATGGCAACAAACACAGTTTATGTGTTTGCCAAAAAGGATTCTAAATATGCCTACACAGGAGAGTGTAGATCATGTCTTGAGAATTCTTCCCGACCCACCAGTACTATATGGGTTAGCATGCTGGCAAGAGGAGGACAGGTATG chr4 - 94230402 43566657 43566656 43566837 50663566 50663565 50663746 181 TTCTTGTC-TCTACACAGGTTCTGATTGCTCAAGAAAAAATGGCTACAAACACAGTATATGTGTTTGCAAAAAAAGATTCCAAATATGCCTACACGGGAGAGTGTAGATCTTGTCTGGAGAATTCCTCTCGACCAACAAGTACTATATGGGTTAGCATGCTAGCCAGAGGTGGGCAGGTATG .....:.:-..:.x.:.............:.....:........x...........x...........x.....:.....:..............:..............x.....x........:..:.....x..x.......................:..x.....x..:........ 8M1D173M 158/181 87.3% 181/94230402 0.0% 1/181 0.6% 13428576 NA +3048 chr4 + 190214555 56996221 56996220 56996273 53 TGTGTGTGTGTGTGTGTGTATGTATATGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........::...:.x::.:x:........:...:.:.:.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% -13986408 -80243994 +13151 chr4 + 190214555 56999603 56999602 56999789 187 CTTTATTTTTCTAGGGTGCCAAGAAGAGTGCTATTGGTCAGCGCATTGTGGCAACTCTACCATATATCAAGCAAGAAGTTCCCATCATTATTGTGTTCAGAGCATTAGGTTTTGTGTCCGACAGAGATATTTTAGAACATATTATTTATGATTTTGAAGATCCAGAGATGATGGAAATGGTAATGTG chr4 - 94230402 43567650 43567649 43567836 50662567 50662566 50662753 187 CCCTGTCTTTTTAGGGTGCAAAGAAGAGTGCTATTGGTCAGCGCATTGTAGCAACGTTGCCATATATCAAACAAGAAGTGCCAATCATAATCGTCTTCCGTGCCCTAGGGTTTGTGTCTGACAGGGACATTTTAGAGCACATCATTTATGATTTTGAAGATCCAGAAATGATGGAAATGGTAATATG .::.:.:...:........x.............................:.....x:.:...........:........x..x.....x..:..x...x.x..x:....x........:.....:..:........:..:..:.......................:.................:.. 187M 158/187 84.5% 187/94230402 0.0% 0/187 0.0% 13431953 NA +14170 chr4 + 190214555 57005202 57005201 57005449 248 GCAACATGAATTTGAAAATAACTTTTATTTAAATTGTCTGATAGGTTAAACCTTCTCTCGATGAAGCTTTTGTCATCCAAGAACAGAATGTTGCACTAAATTTCATTGGTTCAAGAGGAGCAAAGCCTGGTGTTACTAAAGAGAAAAGAATTAAATATGCAAAGGAAGTTTTACAAAAAGAAATGCTCCCTCATGTTGGTGTCAGTGATTTTTGTGAGACCAAAAAAGCCTATTTCTTGGGGTATGTT chr4 - 94230402 43568274 43568273 43568518 50661885 50661884 50662129 245 GCACCATAAGCTTCAGGGT---TTTGCTGTAATTTGTTCATTAGGTTAAGCCATCCCTGGATGAAGCCTTTGTGATTCAGGAGCAAAATGTTGCTCTGAACTTCATTGGATCAAGAGGTGCAAAGCCAGGCGTCACCAAGGAAAAGAGAATCAAGTACGCTAAGGAAGTCCTGCAGAAAGAAATGCTTCCACACGTTGGTGTCAGTGACTTCTGTGAAACCAAGAAGGCCTATTTCCTAGGGTATGTT ...x...:.::..x.:::.---...xx.x...x....:::x........:..x..:..x........:.....x..:..:..:..:........x..:..:........x........x........x..:..:..:..:..:..:.....:..:..:..x........::.:..:...........:..x..:..............:..:.....:.....:..:.........:.:......... 19M3D226M 189/245 77.1% 245/94230402 0.0% 3/245 1.2% 13436928 NA +8237 chr4 + 190214555 57005588 57005587 57005723 136 TTTTTTTTAAAGATACATGGTTCATAGGTTACTTCTGGCAGCTTTGGGTAGAAGAGAACTAGATGACAGAGATCACTATGGAAACAAGAGATTGGATCTTGCTGGGCCGCTGCTTGCATTCTTATTTAGAGGGTAA chr4 - 94230402 43569261 43569260 43569396 50661007 50661006 50661142 136 TTATTTCTTTAGGTATATGGTTCATAGATTGTTGTTGGCTGCACTGGGCAGAAGGGAGCTTGATGACAGAGATCATTATGGCAACAAAAGGCTGGATCTTGCTGGGCCACTGCTGGCTTTTCTGTTCAGAGGGTAA ..x...:.xx..:..:...........:..::.x:....x..x:....:.....:..:..x..............:.....x.....:..::................:.....x..x..::.:..:......... 136M 106/136 77.9% 136/94230402 0.0% 0/136 0.0% 13436327 NA +14144 chr4 + 190214555 57006808 57006807 57007005 198 TTCGGCAGTATGTTTAAGAATTTGCTTAAAGAAGTGCGGATCTATGCACAGAAATTTATTGATCGAGGAAAGGATTTTAACTTGGAGTTGGCAATTAAAACACGGATCATATCTGATGGCCTAAAATACTCTTTAGCTACTGGAAACTGGGGTGATCAAAAGAAAGCTCATCAAGCCAGAGCTGGAGTATCTCAGGTA chr4 - 94230402 43569717 43569716 43569914 50660489 50660488 50660686 198 TTCTCCAGAATGTTTAAGAATTTGCTGAAGGAAGTGAGAATATATGCACAGAAGTTTATTGACAGAGGGAAGGATTTCAACTTGGAGCTGGCAATTAAAACGAGAATTATTTCTGATGGTTTGAAATACTCATTGGCCACTGGAAACTGGGGTGATCAGAAGAAAGCTCATCAAGCCAGAGCAGGTGTATCTCAGGTA ...xx...x.................x..:......x.:..x...........:........:x....:........:.........:.............:x.:..:..x........::.:........x..:..:....................:.......................x..x............ 198M 170/198 85.9% 198/94230402 0.0% 0/198 0.0% 13437091 NA +26309 chr4 + 190214555 57010356 57010355 57011103 748 TCTAGGTGTTAAACCGCCTGACTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCTCCTATTGGTAGAGACGGCAAGCTAGCAAAACCAAGACAGTTGCATAATACGTTGTGGGGAATGGTGTGTCCTGCCGAGACCCCAGAGGTAATACAT-TAGAATTTACATT----------CAGGACAAAAAG------TCAGTGGGTAATTATGTAG--GGCATAATTACTTTTAG-----------AAATAGATGTTTGAAAAATTATG--CAGAGTGGTTTAGA-------------------------------------AATAAGTTTTTTTTATAATTGTATTCTTAGAAAGTAAGAATAAATCTTGAAATCACATTGAAGGAAAAATGTTTATG-------------------GAAAAGAAGTTTGATAG-----GCATGTAAAATCAG------------------AATGACTAATACT-TGGTTTATTTTTTAGGGCCATGCTGTAGGACTTGTGAAGAATTTAGCCTTGATGGCGTATATTTCAGTTGGATCTCAACCATCTCCAATTCTGGAATTTTTAGAAGAATGGAGTATGGAAAATTTAGAAGAAATTTCTCCTGCAGCTATTGCTGAGTGTGTATAGATGGAATTAGTTTTTTAAAC-TATAGTTAATCTTTAGTTGTTGCTTAGTATAGAATTGTTAAGTGTAAAATGCTTTTGCTTTT------------TCATTGTAGTGCAACCAAGATTTTTGTTAATGGCTGCTGGGTTGGAATACATAAAGATCCCGAACAACTTATGAACACCCTAAGGAAATTGAGACGTCAGATGGACATCATTGTGTCTGAAGTA chr4 - 94230402 43570036 43570035 43570888 50659515 50659514 50660367 853 TTCAGGTGTTAAACCGCCTGACTTTTGCATCAACACTTTCCCACCTGAGACGCCTGAATTCTCCAATTGGTAGAGATGGAAAGCTAGCAAAGCCCAGGCAGCTGCACAATACGCTGTGGGGAATGGTTTGCCCAGCTGAGACTCCAGAGGTAATGAACGTAGTATTTTCATCACTACTTGTATCTGTCAAACTGCTTTTATCTGGTGGTCATTTTGTGGCTGGACTAGATGATTTCAGTCGTCATTCCAACCTTAATGGTCCTGTGATTACGATCATGGCAGTTTAAGCGATCACCTGCACTTCACTTTTAATGCTGACACGAACACTTAGCTTTATAGCTAACTTTTTATTTAAGTGGTAGAAATAAAAT--------ACATTAAATAGTGTAT-TTTGTGTACAGTTCCTTGAGGGCTTGAAACAAAGTTCTCCAGTCTTGGTTTGGAAGATCGGGGAGTCTTTTGGTTTGGAAATGCAAAATACTCTTACGTTTCTCCTAGGGTCATGCAGTAGGACTTGTGAAGAACTTAGCCCTGATGGCTTACATTTCTGTGGGGTCTCAGCCATCCCCAATTCTGGAATTCTTGGAAGAGTGGAGTATGGAAAACCTGGAAGAAATATCTCCAGCGGCGATCGCAGAGTATGTGCAAATGGAATTA----CTTAAACAGATAGAAGGCTTTTATTACCTGCACAGTGC-------TTCAGGGTTTTGTGGCTTTGTTTTTTTTTTTTTTCCGTCTTTCTAGTGCTACCAAGATTTTTGTTAATGGCTGCTGGGTAGGAATACACAAAGATCCAGAGCAGCTTATGAATACCCTAAGGAAGCTCCGTCGTCAGATGGATATCATTGTGTCAGAGGTA .::.........................:..x..x.....:......x.x..::.:........x...........:..x...........:..x..:...:....:......:.............x..:..x..:.....:...........:x.:-...x....x...:----------:xx.x....xx.------..x.xx...x...x...:.--..xx..:x.:x...:..-----------.xx.x:...x.:xx:x:....:.--..x:.::.....::-------------------------------------.x.x..:...x.xxx...:.x.x.x:...::x:...::......x:--------.....:..x::x:x..-...:..-------------------....x:.....:xx:..-----.:x..x..:...:.------------------....xxx......-.x::x.x.:.::.....:.....x.................:......:.......x..:.....x..x..:.....:.....:..............:..:.....:..............::.:........x.....x..:..x..:..x....:...::.:.........----:......-x....xx::::....x.xx:...x:...::-------..x..x..xxx:..x:....:....------------..x..x......x.............................x........:........x..:..:........:...........::.xx.x...........:...........x..:... 158M1I13M10I12M6I19M2I17M11I23M2I14M37I46M8D16M1D6M19I17M5I14M18I13M1I174M4D7M1I30M7D25M12I124M 541/728 74.3% 853/94230402 0.0% 145/728 19.9% 13440320 NA +10997 chr4 + 190214555 57015485 57015484 57015662 178 TTTCTTTTTATATGTAGGTTTCTATGATCAGAGATATTCGAGAGAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTAGACCACTTCTGATTGTGGAAAAACAAAAGCTACTTTTGAAGAAGAGGCATATTGACCAATTGAAAGAGAGAGAATATAACAACTATAGGTAAAA chr4 - 94230402 43571180 43571179 43571357 50659046 50659045 50659223 178 TTTGCTTTCTTGTGCAGGTCTCAATGATTAGGGATATTCGTGAGCGAGAAATCCGCATCTATACTGATGCAGGCAGAATTTGCCGACCTCTTCTAATTGTAGAAAAGCAGAAGTTACTGTTGAAGAAAAGGCATATTGACCAACTGAAGGAACGAGAGTATAACAACTACAGGTGAGA ...x:...:x.:..:....:..x.....:..:........x...x.:..:..:..x........x.........x.x.....:x....x.....:.....:.....:..:...:....x........:...............:....:..:x....:...........:....:.:. 178M 141/178 79.2% 178/94230402 0.0% 0/178 0.0% 13444305 NA +22671 chr4 + 190214555 57017036 57017035 57017740 705 TTTTTAGTTGGCAGGATCTTGTGGCCAGTGGGGTAGTGGAGTATATTGATACCCTGGAAGAAGAAACAGTGATGCTTGCAATGACTCCAGATGATTTACAGGAGAAAGAAGTAGCTTATTGTTCCACATATACACACTGTGAGATTCATCCCTCAATGATCCTTGGTGTCTGTGCATCTATTATTCCCTTTCCTGATCATAACCAGGTTGGT--ATCACTTTTTGTCTTCTGGTGTGAGGAATTGGGAGAAGTAATA-AAAATTGAAAGTAACTCTGTAGTCTTATCTGGAGGGAAAAAGCCTTTTAATGAAAAGGCTATTAACTCCTACGGAATCAGTATTTGATATAATTGCTGTTGTGTTTCATGGTTAAGAGCCGTAATTGATTATTCCAAATGGTTATTACTTACTGTTTTTGAAAAAAATCAGGAGTTTTACCAATCATATTTCTTTTGATTTATTGTCAGAGTCTTTTCCATTAGTGATAGTAACTTTTTGTTGTTTCTGCTTTTCATTTTTACGTTTAGTCCCCTAGAAACACATACCAGTCTGCTATGGGTAAGCAGGCTATGGGAGTTTACATCACCAACTTCCATGTTCGCATGGACACATTGGCCCATGTTCTCTATTATCCTCAAAAGCCACTTGTGACTACACGGTCTATGGAATATCTACGATTTAGAGAGCTGCCAGCAGGTATG--GTCAGTT chr4 - 94230402 43571599 43571598 43572110 50658293 50658292 50658804 512 TTATCAGTTGGCAGGACCTTGTGGCCAGTGGTGTCGTAGAGTACATCGATACACTGGAAGAAGAGACTGTGATGCTGGCCATGACTCCAGATGACTTGCAGGAGAAGGGTGTTGCATATTGTTCAACGTATACCCACTGTGAGATTCACCCATCCATGATCCTGGGAGTGTGTGCATCTATTATTCCTTTCCCCGATCACAACCAGGTCAGTGCATCACTTCTGCCATCCTGCT---------------------TATAAGATTGATAGGAAACCTACAG---------------------------------------------------------GTATATG----------TGTTA-----------TAGGAGCCATATGTGCATATATAAA--------TATCTAC------------------------------------------------------------------------------------------GTTGCTGTCTTTC-CTTGTCTGTCTAGTCTCCTAGGAACACATACCAGTCTGCTATGGGTAAACAGGCAATGGGAGTCTACATTACAAACTTCCATGTTCGTATGGACACGCTGGCCCATGTTCTGTACTATCCTCAGAAGCCCCTTGTAACAACACGCTCCATGGAGTACTTGCGATTTAGAGAGTTACCAGCAGGTATGTTGTCAGTT ..x.:...........:..............x..x..:.....:..:.....x...........:..x........x..x..............:..:........:.:x..x..x........x..:.....x..............:..x..x........x..x..x.................:..:..:.....:........::..--.......:.xx:x.:...x.---------------------..-..:.....x..x..x:..::..---------------------------------------------------------....x..----------....:-----------..:.....:..xx..xx...x:x..--------..::...------------------------------------------------------------------------------------------...x...::....-:..x.x:..:.....:.....:..........................:.....x........:.....:..x..............:........::.............x..:........:.....x.....:..x.....x..:.....:..::.:............:.:............--....... 212M2I20M21D2M1I22M57D7M10D5M11D25M8D7M90D13M1D187M2I7M 413/507 81.5% 512/94230402 0.0% 203/507 40.0% 13445437 NA +7540 chr4 + 190214555 57020869 57020868 57020997 129 TTTTAATGTATGCTCTTAAATTCACTGCAGGCATCAACTCAATTGTGGCCATTGCATCATACACTGGATATAATCAGGAAGACTCTGTTATCATGAATCGTTCAGCTGTAGACCGCGGCTTCTTCAGGT chr4 - 94230402 43572524 43572523 43572651 50657752 50657751 50657879 128 TTTCAAAGTATTCACTCAA-TGTATTACAGGTATCAATTCAATCGTAGCCATTGCGTCATATACAGGCTATAACCAGGAAGATTCTGTCATCATGAACCGTTCTGCTGTTGACAGAGGCTTTTTCAGGT ...:..x....x.x..:..-.x:.:.:....:.....:.....:..:........:.....:..x..x.....:........:.....:........:.....x.....x...x.x.....:....... 19M1D109M 102/128 79.7% 128/94230402 0.0% 1/128 0.8% 13448345 NA +7642 chr4 + 190214555 57022146 57022145 57022251 106 TTTTAGGTCTGTTTTCTATCGCTCATACAAAGAACAGGAGTCTAAAAAAGGATTTGATCAAGAAGAAGTTTTTGAGAAGCCTACACGTGAAACATGCCAGGGTAAG chr4 - 94230402 43573959 43573958 43574064 50656339 50656338 50656444 106 TTTCAGGTCTGTGTTCTATCGCTCCTACAAAGAGCAAGAGTCCAAGAAAGGCTATGACCAAGAGGAAGTTTTTGAGAAGCCTACCCGTGAGACTTGCCAAGGTAAG ...:........x...........x........:..:.....:..:.....x.x...:.....:....................x.....:..x.....:...... 106M 91/106 85.8% 106/94230402 0.0% 0/106 0.0% 13448187 NA +23146 chr4 + 190214555 57023315 57023314 57023822 508 TCTATTTCCTCACAGGCATGAGGCATGCCATTTACGACAAGCTGGATGATGATGGTTTGATAGCTCCAGGGGTTCGTGTATCAGGAGATGATGTTATTATAGGCAAAACAGTCACCTTGCCTGAAAATGAAGATGAATTGGAGAGCACCAATAGACGCTATACCAAGAGAGACTGTAGCACTTTTCTCAGAACTAGCGAGACGGGCATTGTGGATCAGGTTATGGTAACTCTCAATCAGGAAGGATATAAATTTTGTAAAATAAGGGTGAGTACAACTTTGTTCATG---------TAGCTAGTTTT---AGAAAGTAAACCAAATCCACTTAACTAACTTATTTTTATATGAATT-TAGGTACGCTCTGTTAGGATTCCACAGATTGGAGACAAATTTGCTAGTCGACATGGTCAAAAGGGTACTTGTGGTATTCAGTATAGACAAGAGGTAGGTATCTTTGATCTCCCTCATGCCCAAACCAGTTTTGTTAAATATTTTTTTTTTAATCAAAATTTGCT chr4 - 94230402 43574312 43574311 43574793 50655610 50655609 50656091 482 TTTCTCTCCCCCAAGGTATGAGACATGCAATCTATGACAAACTGGATGACGACGGTTTGATTGCACCTGGGGTACGTGTGTCTGGGGACGATGTCATCATTGGCAAAACAGTAACTCTGCCAGAAAACGAAGATGAACTGGAAAGCACTAACAGGCGCTTCACAAAGAGAGACTGTAGCACTTTTCTGCGAACTAGCGAGACTGGCATTGTAGATCAGGTCATGGTAACCCTTAACCAGGAAGGATACAAGTTCTGCAAGATCAGGGTGAGCACCAACCCGTACGTGTTTTCTACTTAACCACTTTTTTCTGTATCTAAGTT--ACCCATTTAA------TGTTTTCCTATGGTTCACAGGTACGGTCTGTAAGAATCCCTCAAATAGGAGATAAATTTGCCAGCAGGCATGGTCAGAAAGGAACCTGTGGTATCCAGTACAGGCAAGAGGTAG-------TGATTCC-----------------TTTTTTTA-------TTTTTTTAATCATACTTTATT .:.x.:...:.xx...:.....:.....x..:..:.....:........:..:........x..x..x.....x.....:..x..:..:.....:..:..x...........x..::....x.....:.........:....:.....:..:..:....x:..x.......................xx.............x........:........:........:..:..:...........:..:..:..:..:..x........:..x.x:::..x.:..---------..:.:.x....---x.x.xx...:::--.:...:....------.:....:x....:x.:-:.......x.....x..:..:..x..:..x.....:........:..:x.:........:..:..x..:........:.....:..:..........-------....::.-----------------....x...-------............x.x...::. 287M9I11M3I12M2D10M6D16M1I97M7D7M17D8M7D21M 364/469 77.6% 482/94230402 0.0% 52/469 11.1% 13449003 NA +13359 chr4 + 190214555 57024002 57024001 57025546 1545 TAGGATATGCCTTTCACCTGTGAAGGTATCACCCCTGATATCATCATCAATCCCCATGCCATCCCCTCTCGTATGACTATTGGTCACTTAATTGAATGCCTTCAAGGGAAGGTAAGAGATGTTCTTCAAAAATATAGATTCTAAGCTGATGCTTCTTCTAAAACTCTGATAGGTGATTGCTCTCACATTTGAGCCAGGGTACTTTGTAAAAAGCTAGTGTGAGACTTACTTTTCTGCTTTCAAATTGCTTATGATTCTGCCATTTTTTTTGGCAATTTGCAAAGTTATGGACAAGTCAGAATT------------TTTGTGAGATATACTACATTCAACTAATACATATG-TGATTTTCCTTTTGACTAGTTCTTTTCTGTAGATGAACAGTTAATTTGTTGATGGAGAGTTCAATGTGAACTTAATAATTTTATAGTTCTATTATCAGCTCTGCATACATCTTTTGGTGGAGGTTTTCTATTTTTAA-GTATTCTTTTA---AGGTAAAGTGGTAATAGTCTAACATATGGATGGCTTGGTTTTAGGGCATTAAAATGTCATTTTCCTTTGAGCCATCTGAAGTACTTAGGAGTCTCACTCT---TTTTGTACCTGATCCCATGGATCGACTTCTATTTGAATACTTATAATTGAGTTTTTCTTTTTTAAGCAAGTTTATTTGTTCTAAATGTTTTGTGTAAGGTTATAAAATGAACCTTATATATCACAGCTTTCCATAACATAGATTTTGAGTTCAAAATCTTTGAATTTTAAAATACTTAAAATAATACTTTCAAATTTTAAAAGTATTTAAAA---ATTTTTTGAATGCATTTTTATTGATATGACTTTTAGGGGGAGACAGACTGAAGCAACATTTTAAAGAGTACTTTTTTTTTTAAAAGGTATCGGCTAACAAGGGTGAAATTGGTGATGCCACTCCATTTAATGATGCTGTTAACGTGCAGAAGATTTCTAATCTTTTATCTGATTATGGCTATCATCTCAGAGGAAATGAGGTATATTTGCTCTTATAGTAGTAATTTGCCACTTGTTTTTTTTTGTATGTGTGTAGTTTTATTCTGAAACAATGTAACCTTTTATTGAAGTATCATATGTGCACATATAGAAATGTACAGCTTGATGAATTTTCACAAAGTAAACACAGCTGCATGACTAACACCAAGATCTAAAAATGTGAAGGTAGCGACTGAACCTTTTTTAGTCGCTACCTTTCCACTCCCACCCCAAGCTAATTACTCTCTTAATTGCTAACATTATAGATTAGTTCTGTGCTTTAATTTTTATATAAATGGAGTAACACAATATATACACATATCTTCTTTGACGTTGTTTAATTTTTAGGTCTACACTTCAAAATCTGTGTTTGTTGCAGGTCCTGTACAATGGGTTCACTGGTCGAAAAATCACATCACAAATATTTATTGGCCCCACTTATTACCAGCGTTTGAAGCATATGGTGGATGATAAGATTCACTCTCGTGCTAGGGGACCTATTCAGATCCTCAATAGACAGCCCATGGAGGGTAGATCTCGGTAAGAACT chr4 - 94230402 43575676 43575675 43576614 50653789 50653788 50654727 939 TAGGATATGCCCTTCACCTGTGAGGGCATCACACCAGATATCATCATCAACCCCCACGCCATCCCTTCCCGCATGACCATTGGTCACTTGATTGAATGTCTTCAGGGGAAGGTAAGA-----------AGAATGT----TTTATGCTG-----------------------------------CATGTTTAAG---GGATAC--------GAGttaatata-------------tatgtatatattttttat------------ttttttGGTAAAT---------ATGCACAAGCAAGCATTAAATACACATAAGTGGTAAGTGCTAATGCAGTTTAAAAAAAAATAGGATTGTTCTCCATTTACTTAAT-----------GGCAAATAGAAAAGTTTCT--TGGAGGATCTA---CAATCTTGTAAATTTTGT----------CCAGA-------AAATCATCTGTTG-----CTTTTATTCCAAACGTATCCTGTAACCTAGAAAAAGGGGTAGAAATT--------------------------------AGTTGATACTGCCCAGT------TCTGAAAACCTCAG----------CTAGATTTTGTAGCTGAT--------------------------------------------------------------------------------------------AATGAA----AGAAGATACAGCGCT-----------ATCATGGGTGGGGAATCTC------------------AAGTTCTGGCCTTAAAAGCTAAAATTATTTGAAAGGTATTGCTTGA---------TGCTGAGA------------------AATCTGA--CAAGTTTTTGCAAA-----TCTTTTCTCTGTAGGTGTCGGCAAACAAGGGAGAAATTGGTGATGCTACACCATTTAATGATGCTGTCAATGTGCAGAAGATTTCCAATCTTCTATCAGATTATGGCTATCATTTAAGAGGAAATGAGGTACA--------------------------------------------------------------ACCAAAATATCAATTCATTG---TATC--------------------------TTTAATACGTTT-----------------------GGCAGACAGTAAGGCTTA---------------------------------------------------------------------------------------------TGGTTCAGTGATTGCATT----------------------------------------------------------------------------------GACTGCTTTAGGTCCTCTACAATGGCTTCACTGGGCGAAAAATCACATCACAGATCTTCATTGGTCCTACGTATTATCAGCGGCTGAAGCACATGGTAGATGACAAAATTCATTCTCGTGCAAGAGGGCCCATCCAGATACTTAACAGACAGCCCATGGAAGGTAGATCTCGGTAAGGATT ...........:...........:..:.....x..x..............:.....:........:..:..:.....:...........:........:.....:............-----------.:...:.----.:..x....-----------------------------------..::...:..---..:...--------:..:..:.:.:-------------.::x.x:.x...x:....------------........:..x.---------...x.....:x..x...------------x.x..:..xxx..x.:..x.:x.xx..x.x...x.-.x:..:...x...:x:..:.-----------.:::..:..xx..x..x:.--.....::.::.---::.x...:xx......:.----------:...x-------.x...x.:..x..-----:..:....::x..-....:..x.x.---..:x....x....:x.:.:--------------------------------.:x..x:.:.x:..xx.------......:xx..:..----------..---.......x.....--------------------------------------------------------------------------------------------......----.x.x:x:.....x:.-----------..:x..:..xx::.....:------------------..:.xx.:x::.:...xx:.....x.....:...---...x:....---------.::...x.------------------.:x....--...xx....:x.:.-----.:....:.:x:x....:.....x........x..............:..x.................:..:..............:......:....x...............:.x...............:.--------------------------------------------------------------.x...x:..x.xx..:....---....--------------------------:..:..:x:...-----------------------.:.x:...x:...:::..---------------------------------------------------------------------------------------------.:....x...x..xx...----------------------------------------------------------------------------------.x:..:.x:.......x........x........x.................:..x..:.....:..:..x.....:.....x:.......:.....:.....:..:.....:........x..:..:..:..:.....x..:..:..............:................:.:. 117M11D7M4D9M35D10M3D6M8D11M13D18M12D13M9D17M12I35M1I20M11D19M2D11M3D18M10D5M7D13M5D13M1I11M3I19M32D17M6D14M10D2M3I13M92D6M4D15M11D19M18D34M3I9M9D8M18D7M2D14M5D133M62D20M3D4M26D12M23D18M93D18M82D181M 679/916 74.1% 939/94230402 0.0% 652/916 71.2% 13448326 NA +15011 chr4 + 190214555 57030187 57030186 57030443 257 TTTTTTTCTCTTAACAGTGATGGTGGCCTGCGTTTTGGAGAAATGGAACGAGATTGTCAGATTGCCCATGGAGCAGCCCAGTTTTTAAGGGAAAGATTGTTTGAGGCATCAGATCCATATCAGGTTCATGTTTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATAAAACCCAGGTGTGTATAGACTTTACTGGCAGTTGATATTTGTTTAGAGGAAA chr4 - 94230402 43577267 43577266 43577513 50652890 50652889 50653136 247 TTTTTGTCCCT----AGTGATGGCGGCCTCCGTTTTGGAGAAATGGAACGAGATTGTCAGATTGCCCATGGAGCAGCCCAGTTCTTGAGAGAGAGGCTGTTTGAGGCGTCAGATCCGTACCAAGTCCACGTATGTAACCTGTGTGGAATCATGGCAATTGCAAACACAAGGACTCACACGTATGAATGCCGGGGATGCCGAAATAAAACACAGGTAAGTGTGGGATTCAGCATCCAGTGA------CTCAGAGGAAA .....x..:..----........:.....x.....................................................:..:..:..:..::..........:........:..:..:..:..:..x..:..:..x........x.....:.....x.....x.....:..:..:.........x....x.....x........x.....:x..:.:.:x..:.x::x.x:x...------:.:........ 11M4D225M6D11M 200/247 81.0% 247/94230402 0.0% 10/247 4.0% 13452920 NA +8198 chr4 + 190214555 57030881 57030880 57031353 473 TTTGTTTTTTCTTTTCAGATTTCTTTGGTGCGAATGCCTTACGCATGCAAACTATTGTTTCAGGAACTTATGTCTATGAGTATTGCACCGCGAATGATGAGTGTTTAGCTATTTTACAGGAGT-------CAACAAGATAATTAAATATCTTGGTGTCTTGTTTC-TATTGTGTGGCTTTTTAAAAATGACAAATATGTACTGTGTTGTGATAAAAAGTATTTTATT--------------TGTTTAATGATATGCATGCTTTTCTTCTGTAAATATATAATAAATTTTTGTAGATAGTCTTGATGTGTGA---TCTTTATTTTGTATTTCTCTGTGTAAAACCAGTGAATA----------TAACTAAAGTGTTAGTGGATTGGATTAAAAGAAACTTATTAGGCAAGAACAGGT-----AATGTAGTTATCC---ATGACTACTTTTAACCATGCAGACTAATAATATTCTGGAGGTTTATAGCTCGGCACCTTCACCTGTTTAAAAAAAAAAA chr4 - 94230402 43578610 43578609 43579071 50651332 50651331 50651793 462 TTTGAAATCTCTTCCCAGATATCTTTGGTTCGAATGCCCTACGCCTGCAAACTCCTCTTCCAAGAACTGATGTCTATGAGCATTGCACCTCGGATGATGAGTGTTTAGCT-TCTTAAAGAGGTATTTTTAAAACGTGAGACTGAA--GTCTTTAGATTTTGTTTCATTTTGTGTAG----------------------------GTTGTGTTTAAAACAGTCTTACTCAGCAGCTGTGTGCTCTTTAA----AAGTATGTTTATTTCCTGTAA--ATAGAATTAAAATTTGTAATCAAACT-----CGTGAATCTCTTTA-TTTGTATATC----TGCAAAAGAAGTGCGCAAGCAAATGGGTAATCAAAG----AATAAAGGAGGTAAGAGAATGATTAGTGAGCTAGAAAAAGCCCGAGGCTGTGGCTTTCCAAAATACTAACTTAAAATTGTGCATA--AGTGAAAGTCCTCACA-TCACAGCTCTGCACCATCATCTGCGGAAAAACAGAAA ....xxx.:....::.....x........x........:.....x........x:.x..:..:.....x...........:........x..:.................-.:...x..::..-------x...:x..x.x.x..--:....x:x:.:.......-.x......:.----------------------------......x.x....xx:.:...:.--------------.x.....----.x.:...:..x.:.:......--...x...x..xx......:x:.:x..-----:....---......-.......x..----..:....xx....x::.----------...::....----.:.::.xx:.:.x.:.::.x:x...x.::..x....x.:.:-----:x...:.:.x...---..:x:x....xx..:::....x.--.:.:.x.x..:xx.x:-.:.:.....x.....x...:...:xx.....x.:... 110M1D12M7I15M2D18M1I10M28D23M14I7M4D21M2D26M5D5M3I6M1D10M4D17M10I9M4D41M5I13M3I23M2D16M1D37M 294/419 70.2% 462/94230402 0.0% 97/419 23.2% 13452271 NA +7178 chr4 + 190214555 57032423 57032422 57032565 143 TACCTTTTTTCACTGGTATTTCATGTAAGGCATCAACCACTGTAATTTTTGCTGATGCTGAAGCCTGTCCTTGGGAATTGGATGCATGGCACTCATATTCTCCAGCATCTTCCTTACTTAGAGGAGATACCTGTGAAAGAAAA chr4 - 94230402 43580165 43580164 43580307 50650096 50650095 50650238 143 TACCCTTTGTCAGGGCTATTTCATGCAGAGTTTCCACAACATGGATTTTTGCAGAAGCTGTTGCCTCTCCTTTGGCATTTGATGCATGACACTCATATTCTCCTGCATCTTCTTTGCTCAGAGGAGAGATCTAGGGAAAGAAA ....:...x...xx.x.........:.::.:x..x..x..xxx:........x..x....xx....x.....x..x...x........:..............x........:..:..:........x.:..:x.:..::... 143M 107/143 74.8% 143/94230402 0.0% 0/143 0.0% 13452258 NA +7413 chr4 + 190214555 57033187 57033186 57033304 118 GTACTCACCAGCACCCAGCCAGTTACTTCATGCTTTTCTGGGCCACCCCGGGTCTGAATGGCCAGGTTGTCCCGGTCACCAGGCAGGAGTTCTGTCCTTTGAACTCCATAGTGACCCC chr4 - 94230402 43581149 43581148 43581266 50649137 50649136 50649254 118 GTACTTACCAGTACCCAGCCGGTCACTTCATGTTTCTCAGGCCCCCCTCGGGTCTGAATAGCCAGATTTTCTCGGTCACCAGGCAGAAGCTCCATTCTCTGGATACCATACTGTCCTC .....:.....:........:..:........:..:..x..x..x..:...........:.....:..x..:..............:..:..::.:..:..:.:x.....x..x..:. 118M 92/118 78.0% 118/94230402 0.0% 0/118 0.0% 13452038 NA +8136 chr4 + 190214555 57040822 57040821 57040957 136 ACCTTGTTCCAGATGAGGACAGGTGTCGGGATTCCGATGACCTCACAGCTCAAGTACACCTGGGCACCAGTGACATTCCAGATGTCCTTGGGGGGCGTCACTATGGAAGGACCTGC--AGGAGAGGGCACAAAGCCAA chr4 - 94230402 43582434 43582433 43582571 50647832 50647831 50647969 138 ACCTTGTTCCAGATGAGGACAGGGGTTGGGATGCCAATGACTTCACAGCTCAGGTAGATCTGTGCTCCTGTCACATTCCAGATGTCCTTAGGAGGGGTCACGATGGAGGGTCCTGCAAAGAGGAAGAAACAATTCTAA .......................x..:.....x..:.....:..........:...x.:...x..x..x..x.................:..:..x.....x.....:..x.....--..::..:.:x....xx.:.. 116M2I20M 110/136 80.9% 138/94230402 0.0% 2/136 1.5% 13458388 NA +3510 chr4 + 190214555 57045801 57045800 57045883 83 CTGCAACCTCTGCCTCGTGGGTTCAAGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCTCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:x..........:.x.:.x.xx.x........::.............:....x...--.:....::.. 71M2D10M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 38848675 NA +3190 chr4 + 190214555 57057081 57057080 57057153 73 CTGCAGCTTCGTCCTTTAGGGCTCAAGAGATCCTCCCAACTCAGCCTTCCAAGTAGCTGGGACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:....::x:xx...:x...:.....x.x.:.x.xx::.........:...........:......x.::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 38859955 NA +4606 chr4 + 190214555 57078179 57078178 57078303 125 TGCTCACTATGGGCATTC---ATATGTGTAAATAATTTAACCCTCACGACAGCCCTGTGAGGTTCGTACTGTCT------CCTATTTTACAGAGGAGGAAACTGAGACACAGAAAGGTCGAGTAACTTGCCCAG chr4 - 94230402 10729125 10729124 10729258 83501145 83501144 83501278 134 TACTCACTCTGAAGATCCTGAATAAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .:......x..::x..:.---...x:::x:...x:x..x.x......:.:.x...........xx...x.xx..------:.:.........:x.:.:........:....x.x....::.....:........ 18M3I53M6I54M 88/125 70.4% 134/94230402 0.0% 9/125 7.2% 46349054 NA +3072 chr4 + 190214555 57078207 57078206 57078287 81 ATAATTTAACCCTCACGACAGCCCTGTGAGGTTCGTACTGTCTCCTATTTTACAGAGGAGGAAACTGAGACACAGAAAGGT chr4 - 94230402 25455219 25455218 25455299 68775104 68775103 68775184 81 ATTAATTAAGCCTCAGAACAGCTCTGTGAAAGACACAAGATTTATTATATTACAGGTGAGTAGATTGAGGTACAGAGAAGT ..x.x....x.....x:.....:......::xx.::.xx:.:.x:...x......:x...x.:.:....::.....:.:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 31622988 NA +3128 chr4 + 190214555 57084866 57084865 57084936 71 CTGCAACCTCAGACTCCTGGGCTCAGTTTGTCCTACCACCTCAGCCTCCCAAGTAGCTGGAACTACAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:x.::..:.....:...:x.xx.:.xxxx:x........::..................x... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 38887740 NA +4263 chr4 + 190214555 57095511 57095510 57095634 124 CTTAAAATACATTAAGTCATGTAACTCTCACAACCGCCTTGTGAGGTCGGTAGT-------ATCTTCACTTTACAGATGAGAAAACTGATGCTCAGAGAGGTTAAGTAGATTTCTCAA-----GGCTGCACAATCC chr4 - 94230402 10729142 10729141 10729276 83501127 83501126 83501261 135 CTGAATAAACAGGAATTGATTTAGC-CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCC ..x..x.x...xx..x.x..x..:.-.......:xx..:........x....:.-------.x..:..:.......:..:.........x..x..x.x..........:x..x.:..:-----..x.:..x..... 25M1D28M7I57M5I13M 91/123 74.0% 135/94230402 0.0% 13/123 10.6% 46366369 NA +7312 chr4 + 190214555 57109872 57109871 57110388 517 CCCACCTTGCTCGCAGGTGCCCTTGCTGACCTGGGTGATGGCCTTCTCCCCGCGGCTCTCGGCCCTCTGGCTGGCGGCGCGCAGCTGGCAGCCGCTCGGGTAGGTGGTGCCGTCGCTGCCGCACACCGGGTAGCGGCTCTTGCACACGCACACGCCGCTTACACCCGGACCGCCGGCTGCTGCCCCGGCTTTACCCTTCCGCCTCTTGCGGCTCTTCACGCACTCCATGCCCGGCGCGCAGTACCCCCTGCCGGCGCCGCCACCCCCGCACGGCTCGCCCTCGCCGCGGGCGCACATAGGGCAGCAGCCGCACGCGTCGCGGGTCTCGCCCAGCAGGCAGCCCAGCGGGGGCAGGGGCG-----------GGCAGGAGGCCGGCTCGCAGGGGCCGCAGGTGTCCGAAGAGGAGGAAGAGGAGAGGGGCAGGAGCAGGAGCAGCAGCC----CAGCGGCGCCGAGGAGCAGGGCGCGCAGCGACGGCCGC-TCCATGGCGGGGTGCGGTGGCAGCGGCAAGGGCGCGAGTGAG chr4 - 94230402 10386086 10386085 10386554 83843849 83843848 83844317 469 CCTACCCGATTCGCAGGCTCCTTTCTGCACCTGAGCCACGGCGGGCAGACCGTGCTGCAGCGCCTTGCGGCTCACAGCCTTCAGCTGGCAGATGTTGTCGTAGGTGCGGCCGTCGCTGCCGCACACCTGGACGCTGAGCTTGCACTGGCAGACCCCCTTGG----CGAAGCGC------TTGCCCATGGGGTA--------------GCGGCAGTCGAGGCTGTCCCCGCAGGGAG---GGTCTTCCTTGCGG------------CCGCACGAGTCCCCCTCTCCCGCGGCGCAGATGAGGCAGCAGTTGCAGCGGTCGGGGACGTAGCCGCTGGGGCAGCT-----GGGGCTGGGGCACTTGGAGACATCGCAGCGGGTCGG---GCACTTGGCTCGGGCTGCCG-------------GGAGCTCGGC-GGAGCCGCGGCTGCGGCTGAGACAGAGGAG--GAGCAGCGGGCTGAGCAGCGACAGCCGCATCCTCGGCGGCGGG-GAGAGCGGCGGGAGGGGCGCGAGGAAG ..:...:x::.......:x..:..x:xx.....:.:x.:...xxx.xxx...:.x:x.xxx...:.x:....x:.:..x:x..........x:.:.xxx.......xx...................x..xx..x.xx.......xx...x..x..x:.x:----..:.x...------:.....xx.xxx..--------------.....xx.:x.x..xx...x:..xx..x.---:..x::..:...x.------------.......:x..x.....x..xxx......x..::........::...xxx....x..::x.x...xxxx:......:-----.....x.....:-----------x....x:..:...---...xxx.x.x.:..:xx...-------------....xxx...-.....x.x:..x..:..:----...x..x.--...x...:..x:.x........:.....-...x:.....x.x.-.:x:..:....x.:.........x:.. 161M4D8M6D14M14D29M3D14M12D77M5D12M11I13M3D20M13D10M1D18M4I8M2D28M1I14M1D27M 297/453 65.6% 469/94230402 0.0% 80/453 17.7% 46723786 NA +19632 chr4 + 190214555 57109874 57109873 57110515 642 CACCTTGCTCGCAGGTGCCCTTGCTGACCTGGGTGATGGCCTTCTCCCCGCGGCTCTCGGCCCTCTGGCTGGCGGCGCGCAGCTGGCAGCCGCTCGGGTAGGTGGTGCCGTCGCTGCCGCACACCGGGTAGCGGCTCTTGCACACGCACACGCCGCTT---ACACCCGGACCGCCGGCTGCTGC----CCCGG-----CTTTACCCTTCCGCCTCTTGCGGCTCTTCACGCACTCCATGCCCGGC-GCGCAGTACCCCCTGCCGGCGCCGCCACCCCCGCACGGCTCGCCCTCGCCGCGGGCGCACATAGGGCAGCAGCCGCACGCGTCGCGGGTCTCGCCCAGCAGGCAGCCCAGCGGGGGCAGGGGCGGGCAGGAGGCCGGCTCGCAGGGGCCGCAG------------GTGTCCGAAGAGGAGGAAGAGGAGAGGGGCAGGAGCAGGAGCAGCAGCCCAGCGGCGCCGAGGA--GCAGGGCG-CGCAGCGA-CGGCCGCTCCATGGCGGGGTGCGGTGGCAGCGGCAAGGGCGCGAGTGAGCCGTGTCGGGCCGGCCGGCGCCTTAAACCCGCCGCCCCGCCCGGCCTGTCCGCGGGAACCACACCCCGGGGCGGTGAGAG-CACGGGGGCC-CCGCCCGTGCCGCCCTCCCGGCCCCGCGGGGCCTGCG chr4 - 94230402 43592094 43592093 43592728 50637675 50637674 50638309 635 CACCTTGCTCGCAGGCTCCCTTGCTGCGCTGGCTGATGGCGGGCTCGCCGCGGCTCTGTGCGCGCAGGCTGGCGGCGCGGAGCTGGCAGCCGCTGCCGTAGGTGAGCCCGTCGCTGCCGCACACCGGGTAGCGGCTCTTGCACACGCACACGCCGAccggggcggcggggccggaggcggcggcggggcccgggccgcccTTCGCCTTGCGGCGCTTGCGGCTCTTCACGCATTCCA-gcccggcggcgcagcgcccgccgccagcgccggcgggggcAGGCGGCTCGGCTTCGCCGCGCCCGCACTGCCAGCAGCACCCGCAGGCGTCCCGCAcccggcccagcgggcagccccgcggcggcagcgccgggcaccgcgccgcATCGCACGGCCCGCAACCCCCCAGCTCCGTCACCGCCACCACGGC---------GGGCGCCAGCAGCGCCAACAACC--ACAGCACCGAGGAGGGCATGGCGACGCGGCGACCGGCCGTCCC----------GCGCCGACTTAAGCCACGGCGCGGAAAACCC----CGCCCCGGGAGGCGGCC--GATCTTCCGCACCGCCCA-------CGCGGCGGCCCCGCCGT-GCCCGCCGGGAGCCATGTTGGCCGCCTCTCCTGCTGCCGTTCCG--CCGGCGAGGACGGCG ...............:x.........xx....x.......xxx...x..........xx..x.x.x.............x..............xxx.......:xx................................................x::---:.:x.x..:...xx...x..x..----.....-----.:..xx....x..x.x..................:....-.......-......::...x.:...:......x.:xxxx.:x:.......x.:........xx.....xxxx:......x.....x.....x..x::.:x.......:........x....x.....x.x......xx:x....xx.....x..x.....:------------..xx...xx:xx:x..x---------....:xx.....x:x..:..:..--:.:..:.......--...x....-...:....-......::..----------...x:.:.xxx:..x.x......::x:.x..----..xx....xx....x.:--:.:.:x....x......:-------.....x::..x.:..x:-.xx..x:.:...-..:.xx....-..x.:.x...:...x.:...--..x...:..x.x... 158M3I23M4I5M5I39M1D7M1I153M12I17M9D23M2D13M2I8M1I8M1I10M10D31M4D17M2D18M7D17M1D12M1I10M1I20M2D15M 443/604 73.3% 635/94230402 0.0% 69/604 11.4% 13517780 NA +3055 chr4 + 190214555 57115490 57115489 57115595 106 AATTGCATGCCCCTACCGGGGAGCGTGGCCTCATGCTAATAGTGTGTCTGGTACAGAATTGGCAATCAATTAAAATTTTTTTTCTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 10343523 10343522 10343621 83886782 83886781 83886880 99 AGCTGTATGTTCTTACAA-------TGGCTTACTGCTGGTAGGCAAATTGGGCAAAATTCAGTAATTAAGCAAAATGCTTTTTCTTTTCTTTTTTTTTTTTTCAGA .::..:...::.:...x:-------....:.xx....::...xxx:x:...xxx.:.x.::.:...:..x:.....x:..........:.............:x.. 18M7D81M 64/99 64.6% 99/94230402 0.0% 7/99 7.1% 46771967 NA +3628 chr4 + 190214555 57142523 57142522 57142601 79 AGTCTCAAGCTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCTCAAGGTGCTGGGATTACAGGCGTGAGCCACTGTG chr4 - 94230402 18197130 18197129 18197206 76033197 76033196 76033273 77 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.:x.....:.....:.....::x.:.x.xx.x........:.....xx.....:.:....--....x:........ 63M2D14M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 38945393 NA +3763 chr4 + 190214555 57145191 57145190 57145269 79 CTGCAGCCTCGACCTCCTGGGTTTAAGCAGTCCTCCCATCTCAGCCTCCCAAGTAGCTGGAACTATAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:x:.x..:.......:...::x.:.x.xx:x........::................:.--.:........ 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 38948065 NA +3004 chr4 + 190214555 57151845 57151844 57151916 72 CTTTTTACTGTTTTTTCTTTTGTCCATTTTTTTTGTTAATTACCAAAATAATTTATATTTAATTTTTTTTAT chr4 - 94230402 29693550 29693549 29693621 64536782 64536781 64536853 72 CCCTTAGCAGATTTTTCTTCTGTGAATTTATTTAGTTGTTTTTCAAACACTTTTATATTTAATTTTCTTTAT .::..x:.x.x........:...xx....x...x...:x..x:....xxxx...............:..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 27458295 NA +3018 chr4 + 190214555 57156899 57156898 57156948 50 TATATATATGTACACACACATATATACACACATATATATGCACACACATA chr4 - 94230402 49414754 49414753 49414803 44815600 44815599 44815649 50 TGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .:.:...:....x...x.:...:.:...:x.....:.............. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 7742145 NA +3048 chr4 + 190214555 57156899 57156898 57156952 54 TATATATATGTACACACACATATATACACACATATATATGCACACACATATATA chr4 - 94230402 66904848 66904847 66904901 27325502 27325501 27325555 54 TATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA .....:..:.............:.:..........x..x.:x..x:::....:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -9747949 -84482453 +3266 chr4 + 190214555 57181850 57181849 57181940 91 GACTTAATGGCTCCATGCCTCAGTTTCTTCGCCTGTAAAGTGGGGTTAATATCGGTAACCTACCTCATAG-GATGCTAGGAGGACTGAGTTA chr4 - 94230402 66214153 66214152 66214244 28016159 28016158 28016250 92 GACTAAGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAGGTGCAGGAAGGTTTAAATCA ....x.::xx...::.::.x.::.....:.::.......:....:x......:.x.x.....:...x...-.:...x:.:...x:.:.:.:. 70M1I21M 59/91 64.8% 92/94230402 0.0% 1/91 1.1% -9032303 -85198099 +3035 chr4 + 190214555 57182047 57182046 57182120 74 GTCTATTACTTGACATATAAGTTGTTTGTGATTCTTTTTTTTTTTTTTTTTTGCTAAAACAAACACTGTTGTGA chr4 - 94230402 30332298 30332297 30332371 63898032 63898031 63898105 74 GTCTACTTAAAGGTATCTAAAATGTGTTAGCTTCTTTTTTTTTTTTTTTTTTGCCAAAACAATCTTCTTTCTGA .....:.xxxx.::..x...:x...x.xx.x.......................:.......x.x::x..x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 26849749 NA +3476 chr4 + 190214555 57210594 57210593 57210695 102 AATTATTTGACTCTCCAAAAAAGTCTTCGAAATAGTTA-CTGCTATGAATTATGTTTTACAAATGAGAAAACTGAGACACAGAGAAGTTAAGACATTTGCTCA chr4 - 94230402 10729155 10729154 10729257 83501146 83501145 83501248 103 AATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ....:x..x.x:...xx..x.xx:..x:..::...x..-:.:....x.::.x::.......::..:..........:....x.x.:......xx......:.. 38M1I64M 68/102 66.7% 103/94230402 0.0% 1/102 1.0% 46481439 NA +3194 chr4 + 190214555 57219927 57219926 57219993 67 ACTAGCTTGGTGGTCCTGGACAAGTTTCTTAACCTCTCTAAGCCTCAGTTTCCTCTTCAGTAAAATG chr4 - 94230402 42976378 42976377 42976444 51253959 51253958 51254025 67 ACCTGTTGGGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATG ..:x.:.x....:.....x::....:x...x......:x.:....:x.......:...x.x...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 14243549 NA +3261 chr4 + 190214555 57266316 57266315 57266373 58 TAAACATGTACATGCATGTGTGTATACACACACACACACACACACACACACACACACA chr4 - 94230402 8395805 8395804 8395862 85834541 85834540 85834598 58 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..........:x.:...:...:.::x:...:xx.:.................x..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 48870511 NA +3284 chr4 + 190214555 57266320 57266319 57266370 51 CATGTACATGCATGTGTGTATACACACACACACACACACACACACACACAC chr4 - 94230402 14964834 14964833 14964884 79265519 79265518 79265569 51 CGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...:..::.:...:......:...xx........::............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 42301486 NA +3024 chr4 + 190214555 57266322 57266321 57266368 47 TGTACATGCATGTGTGTATACACACACACACACACACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:...:.::.:...:......xx........::............. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 42301484 NA +3060 chr4 + 190214555 57266322 57266321 57266375 54 TGTACATGCATGTGTGTATACACACACACACACACACACACACACACACACACT chr4 - 94230402 14964832 14964831 14964885 79265518 79265517 79265571 54 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACT ..::::....:::......::.:.:...xx........::.............. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 42301490 NA +3103 chr4 + 190214555 57309598 57309597 57309643 46 ATATGTGTGTGTGTGTGTGTGTATATATATGTATATATATAACTTC chr4 - 94230402 89821281 89821280 89821326 4409077 4409076 4409122 46 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTC ..:.......x.x.................:.....:..:.:.:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -32511683 -61718719 +3069 chr4 + 190214555 57314563 57314562 57314610 48 CAAAAAAAAAAAAAAATTAAATAAATAAATAAATAAAGTTGAATATAG chr4 - 94230402 53293872 53293871 53293919 40936484 40936483 40936531 48 CAAAAAAAAAAAAAAAGTGAATGAATAAATAAATAAAAATGGAGAAAG ................x.:...:..............:x..:.x.x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 4020691 NA +3482 chr4 + 190214555 57326187 57326186 57326293 107 TGAGAGTACTACAAAGACCATAGGTTTTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAACCCCAACAGAATAAAGAGCAGATAA chr4 - 94230402 28306088 28306087 28306194 65924209 65924208 65924315 107 TAAGATTTCAAAAAACAAAAGAAATCTGTAAGAAATCAAAAATCAAAGCAAAAAATAAAAATAAAAAAAGACCAGCAAAACACACAGAAAAGATAAGGAGCAAATAA .:...x.x.x.x...x.xx.x.::.:.x..x....xx.....xx...:x......x.....x.......:.xx..x....x..x.x:.x.::....:.....:.... 107M 72/107 67.3% 107/94230402 0.0% 0/107 0.0% 29020099 NA +3173 chr4 + 190214555 57326188 57326187 57326259 72 GAGAGTACT---ACAAAGACCATAGGTTTTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 79443269 79443268 79443343 14787060 14787059 14787134 75 GAAAGCACTGTAACAGAAAACACATACTTTGATGAAAAAAAAAAAAAAAGCAAAACAGAACAAAAACCCAAAAAA ..:..:...---...:.:.x..:.x::...x..................:x....x.:..x.....xxx...... 9M3I63M 54/72 75.0% 75/94230402 0.0% 3/72 4.2% -22117081 -72113321 +3330 chr4 + 190214555 57326242 57326241 57326317 76 AAAAAAAAAAAAAAAAAAAGAAAAAAACCCCAACAGAA---TAAAGAGCAGATAAGAGATAGCATGTTCTTTATTTAAT chr4 - 94230402 62085391 62085390 62085469 32144934 32144933 32145012 79 AAAAAAAAAAAAACTGCAGCAAAAAAATCACCACATAAAGCTGAGAAGTAGATAAGCAATTGCGTGTTCTTTTTTTAAT .............xx:x.:x.......:.x.x...x..---.:.::..:.......x:..x..:........x...... 38M3I38M 57/76 75.0% 79/94230402 0.0% 3/76 3.9% -4759149 -89471253 +3141 chr4 + 190214555 57338982 57338981 57339074 93 TTCTTTCCTTCCTTCCTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCTTTCCCTTC----CTTTCCCTTCCTTTCCCTTCC chr4 - 94230402 83048908 83048907 83049004 11181399 11181398 11181495 97 TTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTCAGCGCTTCTCCATCCATCCGCACCC .......:x..:..:...:::.:....:x:x.....:x...::x.:.x.x.x......:....x.:......----...::..x...x.:.x.x:.. 72M4I21M 61/93 65.6% 97/94230402 0.0% 4/93 4.3% -25709926 -68520476 +3776 chr4 + 190214555 57339052 57339051 57339292 241 TCCTTTCCCTTCCTTTCCCTTCCTTTCCCTTCCTTTCTCTTCCTTTCTCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCTTCCTTTCCTTTCCCTTC------TGTTCCTTTCCT-----------TTCCCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTT---CCTTTCCTTTCCCTTCCTTTCCCTTCCTTTCCTTTCCTTT chr4 - 94230402 85832817 85832816 85833077 8397326 8397325 8397586 261 TCTTTTACCCTTCTACTCCCCTTTTTCCTGGCTTCTTTCTGCCCCACATCTTTTGTGCTTTATTTTTTCCTCTTGCTCTTGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCTCTCACTTCCTTCTGGCTCTATCTAAAAGATGTGCTTCTCCTGAGTAGGAGTATTTCTGCAAATTAGTTTCCTGCTGTTCATTTTTCTTTTGTCTTCTTTCCCTTACGCTTGCTGTGTTGCTGCTTTTCTCTTATTCTCGTTGCCATT ..:...x..:.:..x::..::::.....:xx.:.:.:...x..::x.x::.::.x.x....x:...::::..:.x::...x:..:x:::x.....::.:x:::.x.....::..:..x.......::xx:..:x.::------...x.:.:....-----------..:.:x:xxx..xx......x::x..:x:...:....:x.:.:......:..---.:.x::x.x.:x..x.:....:...x:.:..x..x..x.. 137M6I12M11I52M3I40M 132/241 54.8% 261/94230402 0.0% 20/241 8.3% -28493765 -65736637 +3345 chr4 + 190214555 57339383 57339382 57339458 76 CCTTTCCTTTCTTTCCTTTCCCTTCCTTTCTCTCTTTCTCTCCTTCTCTCTTTCCTTCCTTCCTTCCTTCCCTCCT chr4 - 94230402 22629302 22629301 22629377 71601026 71601025 71601101 76 CCTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .....:........:.....x:x.:.x.x:..x:.:...:.:x...x:.:x...:..x..........::.:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 34710081 NA +3221 chr4 + 190214555 57380007 57380006 57380122 116 ATATTCCATCATATGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGATGGAGTACTACTCAGCCATAAAAAGGAATGAATTAACAGCATTTGCAGCTACCT chr4 - 94230402 4406413 4406412 4406505 89823898 89823897 89823990 93 ATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA----------------AGTCAGAAAAAG-------TTACTGGCAAATGCTCCTACCT ...x::..xx...:........:xx.:.:x....................x:.......----------------..:..x......-------...x::...xx...xx...... 59M16D12M7D22M 70/93 75.3% 93/94230402 0.0% 23/93 24.7% 52973594 NA +3120 chr4 + 190214555 57380020 57380019 57380082 63 TGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT------ATATGATGGAGTACTACTCA chr4 - 94230402 48089505 48089504 48089573 46140830 46140829 46140898 69 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTA ........:::........:....x.x................------.x..:..:.x...x:.:.:. 43M6I20M 49/63 77.8% 69/94230402 0.0% 6/63 9.5% 9290515 NA +3319 chr4 + 190214555 57402034 57402033 57402112 79 GTGAGGGAGGGAGGGAGAGAGAGAGAGAGAGGAAGAAGGAAAGAAAGAAAGAAGGAAAGAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 44400493 44400492 44400568 49829835 49829834 49829910 76 GTGAGGGAGGGGGGGGGAGAGA---AGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...........:...:......---..::.:......::...........x::.x...:.x..:xx.x::..:.x:... 22M3D54M 54/76 71.1% 76/94230402 0.0% 3/76 3.9% 13001541 NA +3273 chr4 + 190214555 57402035 57402034 57402097 63 TGAGGG-----AGGGAGGGAGAGAGAGAGAGAGAGGAAGAAGGAAAGAAAGAAAGAAGGAAAGAGAAA chr4 - 94230402 9237693 9237692 9237760 84992643 84992642 84992710 68 TGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ......-----..x.:.:....:..:x..x.:..............:....:..:..::....:..:. 6M5I57M 48/63 76.2% 68/94230402 0.0% 5/63 7.9% 48164342 NA +3065 chr4 + 190214555 57429302 57429301 57429358 57 TTCTTTCTTTCTTTCTTTCTTTCTTATCTCTCTCCCTCTCTTTTTTTTTTTTTTTGA chr4 - 94230402 56232431 56232430 56232487 37997916 37997915 37997972 57 TTCATCTTTTCTCTCTTAAAAGATTATTTCTCTCTCTCTCTTTTTTTTTTTTTTTAA ...x.::.....:....xxxxxx....:......:....................:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 1196871 NA +3067 chr4 + 190214555 57440246 57440245 57440324 79 GACTCCATCTAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGACAACCCAGTAAAAAATGGCCAATAGATTTGAACAGG chr4 - 94230402 16964562 16964561 16964640 77265763 77265762 77265841 79 GACCCAATCAAAGAAAAAAAAAAAAAAAAAGGAAGTCATAGGACTTCCTATGAACAGAGGGTTGAGAGTTTTGAAAGGG ...:.x...x..:..................:..:xx.x.:...xx..:.xx..x.:.x..:::.x..x......x:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 40475684 NA +3671 chr4 + 190214555 57479000 57478999 57479170 171 TATCATATATAT-TATATAATTATTATATGTTATTATATATTATAATATATAATATATAATATATATTATATATTATATATAATATATATTATATATTATATATTATATAATATATATTATATATTA-----TATATAATATATATTATATATA--TAATATATAATATTATAATATAT chr4 - 94230402 48211465 48211464 48211626 46018777 46018776 46018938 162 TATCATATCTATACATACGACTAATATATTCTAT---------------GTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT--CACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAAT ........x...-:...::.:..x.....x:...---------------:..x.:....x...x.x.............::x....x...:......--:.:.x:.....x:.....:x..x...x.-----.:x..:....::.x...xx.x:--...:...x...:.:x...x.x.. 12M1I21M15D48M2D28M5I22M2I23M 108/154 70.1% 162/94230402 0.0% 25/154 16.2% 9267535 NA +3974 chr4 + 190214555 57479019 57479018 57479183 165 TTATTATATGTTATTATATATTA-TAATATATAATATATAATATATATTATATATTATATATAATATATATTATATATTATATATTATATAATATATATTATATATTATATATAATATATATTATATATATAATATATAATATTA-----TAATATATATTATATATAAAA chr4 - 94230402 48211464 48211463 48211624 46018779 46018778 46018939 161 TTATCATATCTA--TACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT--CACAGCATATACCATATACGATCTATGA-----ATCAT-TGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAA ....:....x.x--..:...:x.-........xx...:..x.:........x.x........x....::xx...x...:......--:.:.::.....::.....:x..x...:.-----..:..-.:x..:....::.:...:.-----...:...x.x.:.x.xx.... 12M2D9M1I61M2D28M5D5M1D19M5I21M 110/155 71.0% 161/94230402 0.0% 16/155 10.3% 9267555 NA +4213 chr4 + 190214555 57479029 57479028 57479210 182 TTATTATATATTATAATATATAATATATAATATATATTATATAT-TATATA----TAATATATATTATATATTATATATTATATAATATATATTATATATTATATATAATATATATTATA-TATATAATATATAATATTATAATATATATTAT------ATATAAAATATATATTATATATATAAAATATTATA chr4 - 94230402 48211431 48211430 48211620 46018783 46018782 46018972 190 TTACTATTCATTTTGATAGGTTTGGACTAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATC----TATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ...:...x:...x.:...x:.xxx:xx...:x.x...:....x.-..:...----........x:...:..:.:........x.xx............:::....x..x:......:.:.-:.....x:.....xx..:----...:x..:..------....:x.:...xx.xx..xx.:.......:.:x.. 44M1I6M4I65M1I18M4D10M6I35M 121/178 68.0% 190/94230402 0.0% 16/178 9.0% 9267598 NA +3862 chr4 + 190214555 57479047 57479046 57479186 140 TATAATATATA---ATATATATTATATATTATATATAATATATATTATATATTATATATTATATA--ATATATATTATATATTATATATAATATATATTATATATATAATATATAATATT--ATAATATATATTAT---------ATATAAAATAT chr4 - 94230402 48211465 48211464 48211616 46018787 46018786 46018938 152 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGT ...x....x..---...::xx.x.......x...:..x.:........x.x.............:--....x...:......----:.:.::.....::.....::xxx...:x.x:...--..:....::.x...---------.:.......:. 11M3I51M2I15M4D34M2I14M9I11M 99/136 72.8% 152/94230402 0.0% 20/136 14.7% 9267582 NA +3135 chr4 + 190214555 57479060 57479059 57479165 106 ATATATTATATATTATATATAATATATATTATATATTATATATTATATAATATATATTATATATTATATATAATATATATTATATATATAATATATAATATTATAA chr4 - 94230402 22326845 22326844 22326950 71903453 71903452 71903558 106 ATATATAATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGATTAAAATACCTAACATTTCATATATAATACATTCGATAATGTAA ......x..::.........:xx.:..:..xx..x.......xxx:......:....x..:xx.x.x...:xxx.:..x.:.......xx.:..x::...x.:... 106M 69/106 65.1% 106/94230402 0.0% 0/106 0.0% 35152215 NA +3813 chr4 + 190214555 57479070 57479069 57479240 171 TATTATATATA-ATATA----TATTATATATTATATATTATATAATATATATTATATATTATATATAATATATATTATATATATAATATATAATATTATAATATATATTATATATAAAATATATATTATATATATAAAATATTATATTATATACATTAT-----AT--ATATAAAATATCATA chr4 - 94230402 48211465 48211464 48211620 46018783 46018782 46018938 156 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCAT--------------ATATCACAGCATATACCATATACG-------------ATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ...:....x..-.:...----..x.....x:...:..:.:....x...x.x.............::x....x...:..--------------....:.:.::.....::.....::-------------..x...:..x:...:x..x....:..x...-----..--.:.......:..x.. 11M1I5M4I57M14D24M13D30M5I2M2I15M 107/144 74.3% 156/94230402 0.0% 39/144 27.1% 9267605 NA +3730 chr4 + 190214555 57514384 57514383 57514512 129 TTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45185615 45185614 45185743 49044660 49044659 49044788 129 TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ....:.x:...x........:..::..:x...:.:x.:..::..........xx:....:.:..::.:x:..xx.x...:::x..x::.x.......xx.:x.::::xx...:.:x......::.::.. 129M 76/129 58.9% 129/94230402 0.0% 0/129 0.0% 12328769 NA +3064 chr4 + 190214555 57514385 57514384 57514454 70 TTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .:.:.:....x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 11916672 NA +3806 chr4 + 190214555 57514386 57514385 57514539 154 TTTTCTTTCTTTCT----------TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTT chr4 - 94230402 45185593 45185592 45185751 49044652 49044651 49044810 159 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTT---TCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACT---TGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT .....::....:..----------....x:...x..........---......x..:..:-.:..::..........xx:....:.:..::..x:.:xx.x:....:x..x..---.x.......xx.:x:.::.xx.::...x......::.::..xx.:.... 14M10I20M3D13M1I52M3D49M 99/148 66.9% 159/94230402 0.0% 17/148 11.5% 12328793 NA +4006 chr4 + 190214555 57514393 57514392 57514551 159 TCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTT chr4 - 94230402 45185590 45185589 45185751 49044652 49044651 49044813 162 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..:.::.....:..xx::.:xx..:.:.x:...x..........::..::x.:....---......::..::..xx:....:.:..::.:x:.:xx.x:....:x..x::.x.......xx..x:.:::xx...:.:x.......:.....xx.::... 60M3I99M 94/159 59.1% 162/94230402 0.0% 3/159 1.9% 12328803 NA +3875 chr4 + 190214555 57514397 57514396 57514555 159 TCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC---TTTCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTT chr4 - 94230402 45185590 45185589 45185751 49044652 49044651 49044813 162 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..:..::....:..xx::.:xx..:.:.x:...x..........::..::x.:....---......::......xx:....:.:..::..x:.:xx.x:....:x..x::.x......:xx.:x.::::xx...:.:x..:..:.:.....xx.::... 60M3I99M 93/159 58.5% 162/94230402 0.0% 3/159 1.9% 12328807 NA +3467 chr4 + 190214555 57514418 57514417 57514542 125 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTT---CTTTCTTTCTTTCTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTT chr4 - 94230402 40218680 40218679 40218808 54011595 54011594 54011723 129 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTT ..:...:...:..:...:x.:....x....:.:..:x.x:.x:xxx:..:...---....xx:x:....x:.:......x..-.x....xxxx.x.:..:.:..:.....x........x......:.. 53M3I26M1I46M 82/125 65.6% 129/94230402 0.0% 4/125 3.2% 17295738 NA +3450 chr4 + 190214555 57514426 57514425 57514546 121 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTT---CTTTCTTCTTTCTTTCTTTCTTTCTT-TCTTTC----TTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTT chr4 - 94230402 40218680 40218679 40218808 54011595 54011594 54011723 129 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTT ..:...:...:..:...:x.:....x....:.:..:x.x:.x.xxx...:...---....xx:x...::x:.:......x..-.x....----.x.::.:...:......x........x..:...:.. 53M3I26M1I6M4I36M 82/121 67.8% 129/94230402 0.0% 8/121 6.6% 17295746 NA +3596 chr4 + 190214555 57514444 57514443 57514539 96 CTTTCTTTCTTTCTTTCTTTCT-----TCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTT chr4 - 94230402 83960510 83960509 83960610 10269793 10269792 10269893 101 CCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTT .:...x..:x....:....:.:-----......:..:x.....:x.x....::..xx:::...x.......x..::...........x:.x...:.:.x.. 22M5I74M 66/96 68.8% 101/94230402 0.0% 5/96 5.2% -26446066 -67784336 +4000 chr4 + 190214555 57514459 57514458 57514609 151 TCTTTCTTCTTTCTTTCTTTCTTTCTTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTC-----CTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTT chr4 - 94230402 9693678 9693677 9693835 84536568 84536567 84536725 158 TTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .:..xx..:..x.:.....xx.:.....:.:.:--.:.:....x.:.x.......:.:-----....xx..x::xx.:..x..x:x.xx:.....:..:..::.:.::......::...x:.::..x.:...x..x...:.:......::.:.::... 33M2I23M5I95M 93/151 61.6% 158/94230402 0.0% 7/151 4.6% 47820781 NA +3311 chr4 + 190214555 57514494 57514493 57514645 152 CTTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCT---------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCT chr4 - 94230402 69667737 69667736 69667897 24562506 24562505 24562666 161 CTTTAGTTTTTTCTTTTGATCTGTTTTGTTTCTGTTTTGGCTTTTCAGTCTCATATCATAATTCATGTTCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTCCACCCACCCATACCATTTCCATCTCTTTCCTTTGCTTACTGCTTTGTCT ....xx..:.......:xx..:x.:..x.....x.:..xx:....:xx.:::x.x.:x:xx.::x.x..:.:....::x..::...:.....xx.........:...:...::x:---------::x....:x...:.:.:::..x...x..x....x... 115M9I37M 90/152 59.2% 161/94230402 0.0% 9/152 5.9% -12153243 -82077159 +3470 chr4 + 190214555 57514495 57514494 57514600 106 TTTCTTTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTT--TCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCT chr4 - 94230402 49363792 49363791 49363897 44866506 44866505 44866611 106 TTTCATTTCTTCTTTCTTCCC--CCTCCTTTGTCATTTTTTCTGTATTATTCTATTTCTTTCCTAGTTATTTGCTGTCCCTGTTTTTCTTTGTCCTGTATGTCTTTCT ....x..::.........:..--.:..:..:x.:x...:..:.x.x..x:.:.x........:.--.:x...x..x..::.x.:.......x.:..x.x.x....... 21M2D41M2I42M 72/104 69.2% 106/94230402 0.0% 4/104 3.8% 8150703 NA +3123 chr4 + 190214555 57514498 57514497 57514579 82 CTTTCTTTCTTTCTTT-CCTTCTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTT chr4 - 94230402 44322020 44322019 44322102 49908301 49908300 49908383 83 CTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTTACATTT .....:.:..xx:..x-.....x.:..x.:.:x...x...x.:....::......x.............::::....x:x... 16M1I66M 57/82 69.5% 83/94230402 0.0% 1/82 1.2% 13192478 NA +3357 chr4 + 190214555 57514501 57514500 57514614 114 TCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCT-------------TTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTC----TTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT .:...:...:........x...:.:x:.:.....-------------.....:xxx....xx:x:....x::...:..:x..x.x.:..----.x.:..:...:.....:x........x...:...:.:. 34M13I42M4I38M 77/114 67.5% 131/94230402 0.0% 17/114 14.9% 17295821 NA +3317 chr4 + 190214555 57514523 57514522 57514608 86 TTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCT-TCTTTCTCTCTTTCTTTCTTTCT chr4 - 94230402 18988810 18988809 18988896 75241507 75241506 75241593 87 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...x..x.::...x.x.:..x......:.xx.:..x.:............:..:.........-...x.xx:..:.x:..:..x... 63M1I23M 61/86 70.9% 87/94230402 0.0% 1/86 1.2% 38525713 NA +3223 chr4 + 190214555 57514524 57514523 57514572 49 TCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTT chr4 - 94230402 88442035 88442034 88442083 5788320 5788319 5788368 49 TCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTT .....:.x......x...........x:......:x.:........... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -30927511 -63302891 +4573 chr4 + 190214555 57514527 57514526 57514715 189 TTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCTTTCTTTTCTTTCCTTTCTTTTTCTT---TCTTTTTGATAGT chr4 - 94230402 45185576 45185575 45185758 49044645 49044644 49044827 183 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTT---------CTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGGTAAT ..:x.x...x..x..:x:....::....:..xx::.:xx:.....x::..x.........:.:.:..x:...::x:.......---------........xx:....:.:.:.:..x..:xx.x::....x..x::.........xx::x:::..xx...:.:x..::...:....---......x.:..:. 83M9D84M3I13M 111/180 61.7% 183/94230402 0.0% 12/180 6.7% 12328951 NA +3738 chr4 + 190214555 57514573 57514572 57514677 105 TCTCTTTCTTTCTTCTT--------TCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-----------CTTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:...:...:x.x...--------.x..:..:::....:..:...:.:...:x.::..:x.x..:.x..-----------.....x.:...:...............x.:x...::....... 17M8I45M11I43M 74/105 70.5% 124/94230402 0.0% 19/105 18.1% 14432672 NA +3578 chr4 + 190214555 57514590 57514589 57514811 222 TCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCTTTCTTT----TCTTTCCTTT----CTTTTTCTTTCTTTTTGATAGTCTCACTTTGTCATCTAGGC--------TGGGGTGCAG-TGACTCA------------ATCTTGGCTC---ACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTC--CTGCCATAGTCTCC chr4 - 94230402 71741111 71741110 71741364 22489039 22489038 22489292 254 TTTCTCATTCTTGTTCTAATTATTTTCTACTTACATTTCACCTCTCTTCTTTCTTGCTGTCTTTATCCTTGCCTGGCTTTCCATCTGTTTCTCCAAAGCATTGCCATTGGAATCTTTTCTCCTCTCATGTTATTTTGATTTTACCATCCATATTTCCCCTGTGGAGTACAGCTAATTCAAATGTGTTGTATATTTTTGCTTTAGACTGCAACAGTCA--GCCTTGATCCTAGCTCTTTTCATCTGCCACCTTTTCC .:....x.....x:.:.xx..x...::.x...x.x..::x:..:..........:x..x...:.x..::.x:...x.....:x.:.x.....::----:x..x..x..----::......::::.:x..x..x.:.x.:...::....:.x::--------...:..:...-.:.:...------------..:..x...:---........xx:..--x...x.:.:.x...xx..:..--......:xx.:... 94M4I10M4I41M8I10M1I7M12I10M3I13M2D21M2I14M 141/220 64.1% 254/94230402 0.0% 36/220 16.4% -14226521 -80003881 +3813 chr4 + 190214555 57514603 57514602 57514715 113 CTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCTTTCTTTTCTTTCCTTTCTTTTTCTTT-CTTTTTGATAGT chr4 - 94230402 78374923 78374922 78375035 15855368 15855367 15855480 113 CCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTC---CACTTCTCTCTCTTTACTCTTGGACAGT .::.:....x.......:.--:....:::..........:.........xxx...:..:..:x:::.x..:xxx........x..---.x:....:.:.....-..:..x..:... 19M2I64M3D15M1I12M 77/110 70.0% 113/94230402 0.0% 6/110 5.5% -20860320 -73370082 +3103 chr4 + 190214555 57514628 57514627 57514708 81 TTTCTTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTTTCTCTTTCTTTCTTTTCTTTCCTTTCTTTTTC-----TTTCTTTT chr4 - 94230402 72415628 72415627 72415713 21814690 21814689 21814775 86 TTTCTCTCTTTTTGCTCTATATTTCTCTGGCTATTCTTTTATGTTTTTCTTTCTTTCCCTCCCTTTGGTGCTCTGCAGTTTCTTTT .....:....:..x....x.x.:.....xx..x.::x.:.x.x.:...........:.:.:.....xx.x:..-----........ 73M5I8M 58/81 71.6% 86/94230402 0.0% 5/81 6.2% -14901000 -79329402 +3085 chr4 + 190214555 57518389 57518388 57518433 45 AAAACAAAACAAAACAAAACAACAACAACAAAAAACCCAAAAAAA chr4 - 94230402 75231116 75231115 75231160 18999243 18999242 18999287 45 AGAAAAAAAAAAAAAAGAACAACAACAACAAAAAACCCTAAAAAA .:..x....x....x.:.....................x...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -17712727 -76517675 +3472 chr4 + 190214555 57518393 57518392 57518449 57 CAAAACAAAACAAAACAACAACAACAAAAAACCCAAAAAAACCCAAAGACTGGGTAA chr4 - 94230402 47475135 47475134 47475191 46755212 46755211 46755268 57 CACAAAAAAACAAAACAACAACAACAAAAAAGCCCAACAAACCTAAACACCAGTTAA ..x..x.........................x..x..x.....:...x..::.x... 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 10043258 NA +3314 chr4 + 190214555 57586598 57586597 57586733 136 TAGCATTTTTTTTTTCTTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTGTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTTTCTTTCTTTCATCCAT------------TCTTTCTTTTTCT chr4 - 94230402 69667740 69667739 69667884 24562519 24562518 24562663 145 TAGTTTTTTCTTTTGATCTGTTTTGTTTCTGTTTTGGCTTTTCAGTCTCATATCATAATTCATGTTCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTC---CACCCACCCATACCATTTCCATCTCTTTCCTTTGCT ...:x....:....xx.:.x:...x.:...x...:xx::....xx...:x:x..x.xx..:x.x.::.:....x:x.:::...:.....xx...............:..---.x::..:....------------......:...x.. 109M3D11M12I13M 86/133 64.7% 145/94230402 0.0% 15/133 11.3% -12081142 -82149260 +5141 chr4 + 190214555 57586609 57586608 57586727 119 TTTTCTTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTT----TCTTTCTTTGTCTTTCTTTCTTTCTTCTTTCTCTCTCTCTCTTTCTTTCTTTCATCCATTCTTTCT chr4 - 94230402 89818613 89818612 89818735 4411668 4411667 4411790 123 TTTTCCTTTCTTTCTCTATCCTTTCTCCTTCATTTTTTTCTGTTATCTTTCTTGGTGCCTTTCCCAGttttctttcctttctcctttcccctttcctttccccttttccctttcctttcTCCT .....:...........x..:..::.:...:x...:.....x:.x........----:.....::x..:..::..:......:.....:.::.::..:.::.:..:.::.x.:.x..::.:.. 53M4I66M 80/119 67.2% 123/94230402 0.0% 4/119 3.4% -32232004 -61998398 +3398 chr4 + 190214555 57634102 57634101 57634241 140 CCTACCACCTGTTTTGTAAATAAAATTTTATAGGAGCACACCCTTGCCCATTCAT-----TTATATATATATATGAATATATTTATGTGTATATATATGAATATATTTATGTGTGTGTGTGTATATATATATATATATATATATG chr4 - 94230402 40224581 40224580 40224714 54005689 54005688 54005822 134 CCTCCTAACAGCTTTGT---CAGAATTAAACA----CACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCA---ACA-GGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTG ...x.:.x.x.:.....---:.:....xx.:.----....xx..x..x...x:..-----.x...:x....:..:x:..xx...x....:.---.:.-.:.:.x....x...............:........x...:....:.. 17M3D12M4D19M5I31M3D3M1D47M 93/129 72.1% 134/94230402 0.0% 16/129 12.4% 17409521 NA +3140 chr4 + 190214555 57634167 57634166 57634222 56 ATATGAATATATTTATGTGTATATATATGAATATATTTATGTGTGTGTGTGTATAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x.:....:..x...::........x..x:...:..:..............:x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 37929893 NA +4459 chr4 + 190214555 57669501 57669500 57669615 115 TACTTCCCCTGGCTACTAACAGTTTCT--CTTTCCTATCTATCTATCTATCTATCTATCTATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTATCTATA chr4 - 94230402 33033645 33033644 33033761 61196642 61196641 61196758 117 TGCTTATTTTGGTCAGTTGCAACTTCTAGCTGTTCTATCTATATCTATGTCTATATAAATATCTATCTCTCTCTCTCTCTCTCtatatatatatctgtatttatatatatagacata .:...x:::...::.x.x:..::....--..x.:........x.x.x.:.....x..xx.........................x.x.x.x.x...x...:...x...x..xx:... 27M2I88M 82/115 71.3% 117/94230402 0.0% 2/115 1.7% 24635856 NA +3698 chr4 + 190214555 57669536 57669535 57669659 124 TCTATCTATCTATCTATCTATCTATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTATCTATATGCAAGTTAATCAACCATCTTACCTGATTAATATGTAATTTTAA chr4 - 94230402 33033678 33033677 33033787 61196616 61196615 61196725 110 TCTATCTATATCTATGTCTATATAAATATCTATCTCTCTCTCTCTCTCTCtatatatatatctgtatttatatatatagacatagat---------atatTTCCTAAT-----AGCAATTTTAA .........x.x.x.:.....x..xx.....x...................x.x.x.x.x.x.x...:...x...x..x.:::.::.---------..x..x...:..-----x.:........ 87M9D12M5D11M 81/110 73.6% 110/94230402 0.0% 14/110 12.7% 24635858 NA +3104 chr4 + 190214555 57686461 57686460 57686529 69 TCTGCCTGTTCAAGTAGACTTCAAGTTTTATGAGAGCAGAATTCTTGTCTGCCTTGTTTTCCATTGCAC chr4 - 94230402 33782057 33782056 33782125 60448278 60448277 60448346 69 TCTGCCTGTTCAAATAGACTTGAAAGTTAATGAAACAGAGAATATTGTTTGCTCTGTAGTTCATTTCAC .............:.......x..:x..x....:.xx:::.x.x....:...::...xx.:....x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 23904404 NA +3151 chr4 + 190214555 57698423 57698422 57698505 83 TAAAGTGAACAATTAAAAAAATAAAAATGTCATCCTCTTTTTTTTTTTTTTTTTTTTGATAAACACCATACTGTTCCATCCTA chr4 - 94230402 81144640 81144639 81144719 13085684 13085683 13085763 80 TACAGTGAAC---TCAAGAAGTGCAAATGTCATCTATTTTTTTTCTTTTTTTTTTTTCCTAAGTCCAGAACAGTTTGATACTA ..x.......---.x..:..:.:x..........:x:.......:............xx...::x.x:x..x...:x..x... 10M3D70M 58/80 72.5% 80/94230402 0.0% 3/80 3.8% -23446217 -70784185 +3138 chr4 + 190214555 57731913 57731912 57731961 49 AAAACAAAACAAAACAAAGAAACAAACAAACAAATCAGAGAAAAGAAAG chr4 - 94230402 68654351 68654350 68654399 25576004 25576003 25576052 49 AAAACAAAACAAAACCAACCAACAAACAAACAAACCAAAAACCAGAAAG ...............x..xx..............:..:.:.xx...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -10922438 -83307964 +3005 chr4 + 190214555 57751565 57751564 57751609 45 AGGAGATCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCACACACA chr4 - 94230402 77897765 77897764 77897809 16332594 16332593 16332638 45 AGGAGTTCTCATCCCCTCTTTCTCTCATTCTCTCTTTCACACACA .....x....x::.:....:......x........:......... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% -20146200 -74084202 +3181 chr4 + 190214555 57783736 57783735 57783807 72 ATTTATATATATATATATATATATATATATATATATATATATATATATATATATATACACGCACACACACAC chr4 - 94230402 8395788 8395787 8395859 85834544 85834543 85834615 72 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGAC ..x.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:....:........x.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 49387948 NA +3151 chr4 + 190214555 57855828 57855827 57855887 60 ATATAGTATATAATATATAGCCTATATATAGTATATAGTCTATATAGTATACAGTATATA chr4 - 94230402 67910081 67910080 67910140 26320263 26320262 26320322 60 ATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATA .....x...xx:...:...::xx......x.........x......:...::........ 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% -10054253 -84176149 +3368 chr4 + 190214555 57858514 57858513 57858662 149 GCATTTGATGGTGCATGTATGCAGATTTT-----CCAG--------------TTGAGCCAAAATGACTTTAAAAATATATACACACACACATACGTGTGTAT-------ATGTGTATATATGCATATATGTGTATATATACATATGTGTGTACATACATATATGTGTATATATGT chr4 - 94230402 17853357 17853356 17853531 76376872 76376871 76377046 175 GCCTCTGAAAATACATGTGTTCAGGATTTGGTTATCAGCCACAGCTGGTAACTTAGGTCATAGCAGCCTTCCTGATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGT ..x.:...x::.:.....:.x...:x...-----:...--------------..::.:..x.::::.:..xxx:..:..x...x:......x.x:x.:::..-------..x...x........:......:..:.:.x::.xx.x...:.:.......:...x.x.::...... 29M5I4M14I50M7I66M 95/149 63.8% 175/94230402 0.0% 26/149 17.4% 40005157 NA +3131 chr4 + 190214555 57858668 57858667 57858739 72 TACATACATATATGTGTATATATATGTGTGTGTACATACATATATGTGTATATATGTGTGTGTATATATTTA chr4 - 94230402 19704277 19704276 19704348 74526055 74526054 74526126 72 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTA ..x..........::........x.....:...x...:::.:.:.....:x..x.xx....x.x.xx..:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 38154391 NA +3143 chr4 + 190214555 57858800 57858799 57858870 71 TCTACATGTATATATATGTGTGTACCTACATACACACACATACACACACACACATACTTAAAGCAAAAGGA chr4 - 94230402 14964830 14964829 14964900 79265503 79265502 79265573 71 TTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAATAGGA .:.:.:...::.:.::...:....:x....xx.........:............:xx..:.xxx..x.... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 42893970 NA +3016 chr4 + 190214555 57867580 57867579 57867660 81 AAGTGCAGAGATTTTTAGAAAGGAGATATATACATAGTAAACTAAAAAAAAAAGAGACATATAGTAATCTAAAAATGAGAT chr4 - 94230402 60040328 60040327 60040408 34189995 34189994 34190075 81 AACTGCAAAAATTATGCAAAAGAAGATTTTGAGAGAGGGAACAAAAAAAAAAGGCTGCATATAGTGAAATAGAAATTAGAT ..x....:.:...x.xx:....:....x.xx.x.x..x:...x.........:.xx:........:.xx..:....x.... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% -2172748 -92057654 +3630 chr4 + 190214555 57869279 57869278 57869451 173 TATCATATATATGTGATATATATCACACATATATATAATATATGTATCATATATATAATATATATCATATATATAATATATATCATATATATATATAAAAAATTGTACCGAGGACTCCATATACATATACACACACACACACACAAATATATATATATATACACACACCATAT chr4 - 94230402 67910059 67910058 67910220 26320183 26320182 26320344 162 TATTACATATACA------ATACTAAAAATATAC-TATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAA--GCTGATTAAATATCAACATTTGAATACATATAAGAAAATAT-TTTATTAATG-ACACACTACAT ...:.:.....::------...::.x.x.....:-..x..x..::..x...x.....x.:.....x:............:..x:.....:..:.:x:.x.....xx.--.xx..:.xx....xx.:..x::x.:...:.:.x:x......-.x...xx..:-......:.:.. 13M6D15M1D72M2D41M1D10M1D11M 108/162 66.7% 162/94230402 0.0% 11/162 6.8% -10040780 -84189622 +3026 chr4 + 190214555 57869379 57869378 57869433 55 AATTGTACCGAGGACTCCATATACATATACACACACACACACACAAATATATATA chr4 - 94230402 64220281 64220280 64220335 30010068 30010067 30010122 55 AATTGTACCAAGAAATAGATTTATGTATATATACGCACATACACAGATGTATATA .........:..:.x.xx..x..::....:.:..:....:.....:..:...... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -6350902 -87879500 +3709 chr4 + 190214555 57874849 57874848 57874931 83 CCACAACCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTTTCAAGTAGCTGGGATTACAGGCATGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx:x..:.:.........:.x...x.xx.x.....................:.:....--.:..::....:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 39677723 NA +8315 chr4 + 190214555 57894521 57894520 57894735 215 TATTGAAATGCCCCAAACTCACCAAT-----TCAACTCTTCTGTGGATATTAAACATGTAAGATTAATTACCTAAAAACTCCCAAATGAAACAAACTCAATGACATTTACTGTACCATTCAGCCATTTACTCCTT-TTCATCAATCTTGTAATCCTTCTTGAATCACAATTAAAACCTA--TAATACGTGAAGATGCTGAAAATTTCAAGCAGCATTTCTTTT chr4 - 94230402 45676926 45676925 45677146 48553257 48553256 48553477 221 TGCTGAAATGTCCAAAGAACACAAAACTTGATCAGTCCATCTCCAACTATTAACAATGCAGGATTAATTATTTTAAAACCCATAGATGAAATGAGTTCAATAACATTTACTGTGCCATTCAAGCATTTACTCTTTCTTCACCAACCCTTTATTACTACCTGAATTACAATTGCTCTCTGGCTAATAAATGAAGAAGCTGAAATTTTCAGGC--TATTCCTGTT .::.......:..x..:xx...x..x-----...:::.x...x:::x......xx...:.:.........::.x.....:.x:.:......::.::.....:...........:.......:x.........:..-....:...:.:.x..x.x..x.:.....:......:xxx:..:--.....x:......x.......x.....:..--:...:..x.. 26M5I104M1I43M2I30M2D10M 152/213 71.4% 221/94230402 0.0% 10/213 4.7% 12217595 NA +3526 chr4 + 190214555 57906568 57906567 57906643 76 TATAAAATATATATAAAATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATAAAATAT chr4 - 94230402 68928695 68928694 68928770 25301633 25301632 25301708 76 TATAAAGCATTTTTAATGTATATGAAGAATACATTGAAATATATATGGTTTACATATATATATATATATAAAGTGT ......::..x.x...x:.....:..:x...:..x:.x........::xx..:.....x.............:.:. 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% -11022127 -83208275 +4204 chr4 + 190214555 57906617 57906616 57906808 192 ATATATATAAATATATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATATAAATATATATATAAAATATACA--TATATAAAATATATATAAATATATATAAATATATATAAAATATA---TATAAATATATATAAATATATATATAATATATATAAATATATATATAAAAT chr4 - 94230402 16155645 16155644 16155836 78074567 78074566 78074758 192 ATCTGCATAAGCTAAAGTATATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATAATATACATCTATATACTATCATACAATATACAATTATATAAATTACATATGGATGTATACAATTGCAATAAGAAGACAGTTTCCTGGCATGCAT-----TAAATACATGATTTGTGAGTATGAAAATAAAAT ..x.::....::xx.x:....x.x....:.xx.x.:..x..x..x......:.xx..x:...........:..x..x...:xxx:...x........--........x..:....::..:....:..x.::.xxx.:..x.:.---.x:x:::..::..-----..x...:.xx..x.:.:.:...:x.x....... 97M2I44M3I13M5D33M 120/187 64.2% 192/94230402 0.0% 10/187 5.3% 41750972 NA +3655 chr4 + 190214555 57906634 57906633 57906710 77 TATAAAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATATAAATATATATATAAAATAT chr4 - 94230402 68928695 68928694 68928770 25301633 25301632 25301708 76 TATAAAGCATTTTTAA-TGTATATGAAGAATACATTGAAATATATATGGTTTACATATATATATATATATAAAGTGT ......::..x.x...-.:.....:x.:....:..xx..........::.x..:.....x.............:.:. 16M1D60M 58/76 76.3% 76/94230402 0.0% 1/76 1.3% -11022061 -83208341 +4041 chr4 + 190214555 57906739 57906738 57906989 251 TAAATATATATAAAATATATATAAATATATATAAATATATATATAATATATATAAATATATATATAAAATATATATATAAAATATATAAAAATATATATATAAAATATATATAAATATGTATAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATAAATATATATA--TAAAATATATATAAATATATATAATATATATAAATATATATAATATATATAAATATATATATAAAAT chr4 - 94230402 16155588 16155587 16155836 78074567 78074566 78074815 249 TAATAATAAAGAACATTTCTTCAAATGTACAAAATTTTACAGTCATTTCACAATGCCATCTGCATAAGCTAAA-GTATATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATAATATACATCTATATACTATCATACAATATACAATTATATAAATTACATATGGATGTATACAATTGCAATAAGAAGACAGTTTCCTGGCATGCAT---TAAATACATGATTTGTGAGTATGAAAATAAAAT ...xx...x.x..x..x.x.x:....:..:.x..x.x..:.xx:.x.x:.:.xx:x:..x.::....:x..x.-:....x.x....:.:x.x.:..x..x..x......:.xx..x:.:.........:..xx.....:xxx:.x.xx.....:..x......x.x..:....::..:....:.--.:x....x:x.x.x.xx.x:x.:::..::..---..x...:.xx..x.:.:.:...:x.x....... 73M1D110M2I31M3D33M 149/247 60.3% 249/94230402 0.0% 6/247 2.4% 41751151 NA +4017 chr4 + 190214555 57906852 57906851 57907012 161 AATATGTATAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATAAATATATATATAAAATATATATAAATATATATAATATATATAAATATATATAATATATATAAATA-------------TATATATAAAATATA-----TATAAATATATATATAAAAT chr4 - 94230402 16155658 16155657 16155836 78074567 78074566 78074745 179 AAAGTATATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATAATATACATCTATATACTATCATACAATATACAATTATATAAATTACATATGGATGTATACAATTGCAATAAGAAGACAGTTTCCTGGCATGCATTAAATACATGATTTGTGAGTATGAAAATAAAAT ..x:.:....x....:.xx.x.:..x..x..x......:.xx..x:...........:..xx.....:xxx:.x.xx.....:..x......x.x..:....::..:....:...xxxx....:x.-------------:..::..x.....:.-----.:.:.:...:x.x....... 126M13I15M5I20M 107/161 66.5% 179/94230402 0.0% 18/161 11.2% 41751194 NA +3471 chr4 + 190214555 57906912 57906911 57907038 127 AAATATATAT-ATAAAATATATATAAATATATATAATATATATAAATATATATAATATATATAAATATATATATAAAATATATATAAATATATATATAAAATATATATAAATATATATATATAAAATA chr4 - 94230402 16155659 16155658 16155779 78074624 78074623 78074744 121 AAGTATATATTATACAGTAT-TGTAAATTTATA--ATATACAGTAAAGTATATAATATACATCTATATAC-TATCATACA---ATATACAATTATATAAATTACATATGGATGTATACAATTGCAATA ..:.......-...x.:...-.:.....x....--.....:.xx..x:...........:..xx.....:-...x.x.:.---...x.:.xx........x..:....::..:....:.xx.:x.... 10M1I9M1D12M2D35M1D9M3D45M 89/120 74.2% 121/94230402 0.0% 8/120 6.7% 41751253 NA +3105 chr4 + 190214555 57907076 57907075 57907235 160 TATAATATATATAATATATATAAATATATATAAAATATATATATAATATATAAATATATATAAATATATAT--ATAAATATATATATAAATATATATATAATATATAAATATATATAAATATATATATAAATATATATATAAATATATATATATATATATAT chr4 - 94230402 19637026 19637025 19637183 74593220 74593219 74593377 158 TGTAGTATAGGCAGAATAACTGGGAAGATCTAAGTTCCTAACATGATTTTTACAGGGAAATGAATAGATTTCAGTAAATGGATACAGAAAGTTAAG----ATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCAT .:..:....x::.:x...xx.:::x.x..x...:x.x:xx.:..:..x.x..x.x:x.x..:....x..x.--:.....:x...:.x...xx..x:----..:x......::........xx.......x....x...x..x::..:.x...::....::.. 71M2I23M4D62M 96/156 61.5% 158/94230402 0.0% 6/156 3.8% 38270050 NA +3078 chr4 + 190214555 57907198 57907197 57907245 48 ATATAAATATATATATAAATATATATATATATATATATTCTTGTAGTT chr4 - 94230402 71873891 71873890 71873938 22356465 22356464 22356512 48 ACATGAATATATTCATACATATATATATATATGGATATTCTGGTAGTT .:..:.......x:...x..............:x.......x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -13966693 -80263709 +16934 chr4 + 190214555 57928045 57928044 57928591 547 TCTCAGATTTGAGCCTTCTGCGCTATTCCAATTAAGGTGGATCTTTCTCTCCACGTGGGAATTGCTCTACATAACTGATTACCAAGCACATCATGTAAATGGTTCTTAGAAACTGCAAACAGCCCATTATGGAGAATCCACCTTATTAACAAAGGTCATATTAGAATCTCACCCTGGTAACTAATCACGTCAAATGTACAGTACATCAATAGGCACATAGACTAGGAAGCAGCGTTTTCCAATTAAGTGAATCAGTTTGACCTTCTGAACTATAAATAAACTGCAGCAACAGCTCCTGATTAGGCTTAAAGAGTCCAACTTCCATCTCAAACAAATGCCTCAGAATTTAAGCATACTTAGAAAGTTAATCCTGTAAAGAGTCAATGAACGGATTTAAAATTTCAGCATTTATGCCTTGGACCTGAGTTTTCTCAAATTTCTGCAGTGCAGGCAGAATGGGAATGGTATCCGTCTAAATAGATAA-ACAAAGCCTGAATTAGTTTTACCCTCCCTCGGGATAACCAATTTAACAGGAGCAAACCCATTT chr4 - 94230402 45579860 45579859 45580387 48650016 48650015 48650543 528 TCACAGACGTCTGCCTGGCACCCAGGTACAGTTCTGACAGCTATTGCTTTCAGTATGGGTTTAGCATCATCTAACT---TGTCAAACTTAGCATATAAATGGCTCTTGGAACCTGCAAGCAGCCCATTATGGAGAATGTATCTTATTAACAAAGGTGATATTAGAAACTCACACAAGTATCTAATGGCATCGAATGCAAAGTACATCAATATGCTCAGAGACTGGTGAGTGGTGTTTTCCAATTAAGGCAACTA-TTTGACCTTCTGAACTATAAATAAACTGCCT---GAGTCCCTCAT----CTCAGAGA--CTGGCTTTTAGTGCAACATGATGCCACAGAACTCAGATGTACTTACAAGGCTAATTCTGGAGCAATCTAATGGACAGGATGAAATTTTAAACACTACTGCTTCAGAGAAAAGCATCCTCAAATTTCTGCAGTATTGGCA------GAGTTGCACCCGTTGGAACAGAGAGCACCAATGCAGAGTAGGTATCA-CATCCTTCAGTGGAGCTGCATTCACCGTAGGAAACCACTTT ..x....:x.xx....xx::.x.x:x.x..:..xx.:::.x.x..x..:..x:::....xx.x..x::.:x.....---.::...:.x:.x...:.......:....:...x......:..................x:.:...............x.........x.....x.x:...x.....x:.:..:....:.x............x..x..x.....:.x:..::.:..............xx..::.-.............................xx---x..::...x..----..:.:...--.:::...::.x:x...xxx:.....x.....:.:.::::......x..:.:....:...x.:x:.x::....:..:.:x.x...x...x.:..:.xx...:.::..xxx:..:x.:................::x....------..:.x.:.:....:x:..:...x.:-..x..xx.x..:.x:..x.:.-.x...:..:.x:x.:.::xx..x..x.x..x.....xx... 76M3D175M1D31M3D11M4D8M2D139M6D25M1I21M1D41M 354/527 67.2% 528/94230402 0.0% 21/527 4.0% 12348185 NA +7291 chr4 + 190214555 57931652 57931651 57931955 304 AGGCAAATGTTTACTGAAGAACAGCCATTAATTAATCTGGGGACAATAAAACCCTTTTCCTGTCCTATCTCC-----AGTTAATAATGCATGACTAAAAGTTATGTTCTAACTGTAAATCAGGACAAACAACACATACCACAAACTTATTTCTCTCTCAAGTCCAATAGTTTGATATGTGTGATGTTATAAAATTCCCACTTCGGGCTGCACATCTAATGCTATCTTTGAAAATGTGCTAACAAACTTGAAAGTACTGGGGCTTTTTAATACATTTTTATTACAATGAGAATTTTGAAAAATGAAATCT chr4 - 94230402 45585185 45585184 45585471 48644932 48644931 48645218 287 AAGTAAACGTTTACTGAAGGATGCGCATTAATTAATTGGAGAACAATCAA-CCATCTTTTTGTCGTACCTTCTTTCAGATTAATAATATATGACTAAGAAGAAAAGCAAAACTATAAATCAGGAAA-----------CCAT----TTACCCGATGCTCAAGTGCAACGGTTGTGCATGTGGTTTGTTACAATACTCCCACTAGGTACAGCTCATCTAATTCTGCCTTTG-AAATGCTCTAAGAAGAAAGAATGGATTGTAGGCTGACCTTGCATTGT--ATCCGGAGAGAA---TGAAAAATGAAATCT .:.:...:...........:.::xx...........:x.:.:.....x..-..x.:..::....x..:..:.-----::........::........:.:xx.x:x:xx....:..........x.-----------...:----...:::xx:x.......x...::...xx::.....xxx.....:..x.:.......xx.x:.x..x........x..::.....-.....:x....x..:xxx...x.x.:..x:.x:.xx:xx.:....x.--x.x.::x.....---............... 50M1D21M5I49M11D4M4D84M1D47M2D12M3D15M 190/282 67.4% 287/94230402 0.0% 27/282 9.6% 12346467 NA +3728 chr4 + 190214555 57953455 57953454 57953566 112 GGAAGGAAGGAAGGAAGGGGAGGGGAAGGGAGGGGAGGGGAA------AGGAGAGGAGAGCAGAGG---AGAGGAGAGGGGAGGGGAGGGGGGAGGTGAGAGGAAAGGAAAAGAAGAGAAG chr4 - 94230402 1312662 1312661 1312778 92917625 92917624 92917741 117 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAG----GAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGG ..x...:...:.:::x..:x..:.:.x:.:x..:..::x...------.....----...x...x.---....:............:...:...:...........::::x....::.::. 42M6I5M4D9M3I52M 74/108 68.5% 117/94230402 0.0% 13/108 12.0% 56640793 NA +3353 chr4 + 190214555 57977686 57977685 57977746 61 CAATAGCACTGTTTCTCCTTTGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 - 94230402 17488379 17488378 17488437 76741966 76741965 76742024 59 CAGCAGTTCTGTTTGT--TTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT ..::..:x......x.--..x.:.......x...........:..x............... 16M2D43M 49/59 83.1% 59/94230402 0.0% 2/59 3.4% 40489307 NA +3008 chr4 + 190214555 57977695 57977694 57977763 69 TGTTTCTCCTTTGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTGTCAAGTGATGA chr4 - 94230402 41112021 41112020 41112089 53118314 53118313 53118382 69 TGTGTAACTTATTTTACTTTTTTTGTTGTTGTTGTTGTTTGTTTCCTCAAGTTATTTGGAAAGAAATGA ...x.xx.:.x.x..x:...........................x:.::xx...:...xx...x:.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 16865674 NA +3220 chr4 + 190214555 57977697 57977696 57977775 79 TTTCTCCTTTGT--TTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTGTCAAGTGATGATCATTACATTTC chr4 - 94230402 16244379 16244378 16244459 77985944 77985943 77986024 81 TTTCTTCTTTTTAATTATTTTTCCTTCGTTGTTGTTGTTTGCTTGTTTGTTGTTGTTGTTGAAGGGAGAGCAGTAAGTCTC .....:....x.--..x.....::x.:..............:.........x.xx....::.:x.:x..x..x..x:.:.. 12M2I67M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 41733318 NA +3112 chr4 + 190214555 57977706 57977705 57977742 37 TGTTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 - 94230402 54317741 54317740 54317777 39912626 39912625 39912662 37 TGTTGTCTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT ....x.:.............................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 3659965 NA +3284 chr4 + 190214555 57977706 57977705 57977755 50 TGTTTTTTTT------TTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTGTCA chr4 - 94230402 16135025 16135024 16135080 78095323 78095322 78095378 56 TGCTTTTTCTCGTGGCTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACCATTCA ..:.....:.------..................................:xx... 10M6I40M 45/50 90.0% 56/94230402 0.0% 6/50 12.0% 41842681 NA +3157 chr4 + 190214555 57977709 57977708 57977742 34 TTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 - 94230402 70105253 70105252 70105286 24125117 24125116 24125150 34 TTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% -12127544 -82102858 +3100 chr4 + 190214555 57977712 57977711 57977761 50 TTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTGTCAAGTGAT chr4 - 94230402 72014472 72014471 72014521 22215882 22215881 22215931 50 TTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTAATGCTAGCCTGGTAAT ...............................x.xx.:..x.:.x:..:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -14036760 -80193642 +3067 chr4 + 190214555 57977713 57977712 57977752 40 TTTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTACTTG chr4 - 94230402 48989524 48989523 48989563 45240840 45240839 45240879 40 TTTCTGGTTGTTGTTGTTGTTTGTTTGTTTGTTTTTCCTG ...:.x.............................x.:.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 8988189 NA +3135 chr4 + 190214555 57977714 57977713 57977748 35 TTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTA chr4 - 94230402 4472007 4472006 4472041 89758362 89758361 89758396 35 TTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCA .................................:. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 53505707 NA +3119 chr4 + 190214555 57978569 57978568 57978654 86 AATAGTAATTTGCATTTTTGTTG-TTGTTGCTGTCTTTTTTTTTTTTTTTTTTTTTTAATTTTTAAGACAGGGTCTCACTTTATCAC chr4 - 94230402 59930662 59930661 59930748 34299655 34299654 34299741 87 AATGTTGGTTCAGATTTCTTCTGATCTTTATTAGCTTTTTTCCTTTTTTTTTTTTGTAATGTGTAAGGCATGATCACACTTTTTTGC ...:x.::..::x....:.x:..-.:x..::.:x.......::............x....x.x....:..x.:..x......x.::. 23M1I63M 58/86 67.4% 87/94230402 0.0% 1/86 1.2% -1952093 -92278309 +3027 chr4 + 190214555 57978577 57978576 57978624 48 TTTGCATTTTTGTTGTTGTTGCTGTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 3484467 3484466 3484514 90745889 90745888 90745936 48 TCTGTACTTTAGTTGTTGCTGTTGTTTGTCTTTTTTTTTTTTTTCTTT .:..:.:...x.......:..:...:.x.:..............:... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 54494110 NA +3040 chr4 + 190214555 57978584 57978583 57978623 40 TTTTGTTGTTGTTGCTGTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801532 67801531 67801571 26428832 26428831 26428871 40 TTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT .................::xx................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -9822948 -84407454 +3199 chr4 + 190214555 57993030 57993029 57993144 115 CCTTTTTCTTTTTTCTTTTTTTCCTTC--------CTTACTTC-CTTTGTTCCTTCCTTCCTTCCTTCTTACCTCTTTCTTTCTTTGTTCCTTCCTTCCTTCCATATCTCTTTCTTCTTTCTTT chr4 - 94230402 79652978 79652977 79653101 14577302 14577301 14577425 124 CCTTACCCTTCCTTAGCTGTCTTCTTCAACTCTGGCTCATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTT ....x::...::..xx:.x.:.:....--------..:.::..-.:..x:..x::.....::....x.:...:::..:xx...::::..:..::......:::x....:..:..x....:.... 27M8I8M1I80M 70/115 60.9% 124/94230402 0.0% 9/115 7.8% -21659948 -72570454 +3710 chr4 + 190214555 57993067 57993066 57993224 158 TTGTTCCTTCCTTCCTTCCTTCTTACCTCTTTCTTTCTTTGTTCCTTCCTTCCT-----TCCAT--ATCT-CTTTCTTCTTTCTTTCTCT------CTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCT chr4 - 94230402 38122942 38122941 38123112 56107291 56107290 56107461 171 TTGTTCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTT-TCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCT ........:xx.:x...:..:...x...x.......:...x:.x....:x:x..-----.:...--.:..-..:.x...::x:......:------:....:.:.x.x..:.::.x..x.x...-.:.x.x.x.........:.x..:..:.:.:::x..x.x...:..... 54M5I5M2I4M1I19M6I28M1D47M 104/157 66.2% 171/94230402 0.0% 15/157 9.6% 19870125 NA +3944 chr4 + 190214555 57993076 57993075 57993294 219 CCTTCCTTCCTTCTTACCTCTTTCTTTCTTTGTTCCTTCCTTCCTTCCATATCTCTT---TCTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCT---------------TCCTCCC-----------TTCCTCC-------CTTCCTTCT-TTCCTTTCTCTCCTTCCTTCCCTCCCT--CCCTCCCTCCCTTCCTTCCTTCCTTTTTCCTTCCTT chr4 - 94230402 85832816 85832815 85833071 8397332 8397331 8397587 256 CTCTTTTACCCTTCTACTCCCCTTTTTCCTGGCTTCTTTCTGCC--CCACATCTTTTGTGCTTTATTTTTTCCTCTTGCTCTTGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCTCTCACTTCCTTCTGGCTCTATCTAAAAGATGTGCTTCTCCTGAGTAGGAGTATTTCTGCAAATTAGTTTCCTGCTGTTCATTTTTCTTTTGTCTTCTTTCCCTTACGCTTGCTGTGTTGCTGCTTTTCTCTTATTCTCGTT .::.::.x..:.::...::.::.:....:.x.:.:...:..x..--...:....:..---::..x...:..:....:x.....x::.:x..:x.:::.:..:x::..x::.....:...:x...:.....xx....---------------.:....:-----------..:..x.-------:.....x..-...x...:...::.x:....::.....--.x..:x..x:x..x..x.:..:..:..x:::..x.. 44M2D11M3I76M15I7M11I7M7I9M1I27M2I36M 135/217 62.2% 256/94230402 0.0% 41/217 18.9% -27839740 -66390662 +3417 chr4 + 190214555 57993133 57993132 57993301 169 TCTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTTTTCCTTCCTTTTTTCTC chr4 - 94230402 2458545 2458544 2458713 91771690 91771689 91771858 169 TTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGCTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTTTCCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACTGTTCCTGTGCATTTTCTCTCAGCACCTTCCCGTCTTCATTATTCTTCCATTTTGCCTC .:...::.:...::.:..x.x...::.....:xx:.:.:..:.:x...:.:x::.x..:.:x.:.x....:..::::x:.:x..:x.xxx..x.::...:::x..:..x::x.....x:x.x:::..:...xx:x......:x:....x..x...:.:.x....x:... 169M 90/169 53.3% 169/94230402 0.0% 0/169 0.0% 55534588 NA +3539 chr4 + 190214555 57993133 57993132 57993301 169 TCTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTTTTCCTTCCTTTTTTCTC chr4 - 94230402 2456306 2456305 2456474 91773929 91773928 91774097 169 TTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGTTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTCTTCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACTGTTCCTGTGCATTTTCTCTCAGCACCTTCCCGTCTTCATTATTCTTCCATTTTGCCTC .:...::.:...::.:..x.x...::.....:xx..:.:..:.:x...:.:x::.x..:.:x.:.x......:::::x:.:x..:x.xxx..x.::...:::x..:..x::x.....x:x.x:::..:...xx:x......:x:....x..x...:.:.x....x:... 169M 91/169 53.8% 169/94230402 0.0% 0/169 0.0% 55536827 NA +3425 chr4 + 190214555 57993155 57993154 57993243 89 TTCTTTCTTTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTTCTTCTCTCTCTTCCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTC chr4 - 94230402 70202174 70202173 70202262 24028141 24028140 24028229 89 TTCTTGAGTTCTGACGTTCCTGAACTGTCTCTGCTTCTTCTCTCTTCTCTCTTCTCCCCCCTCCCCCCCTTCCCAATTTTCCTTTTCTC .....xxx....xx.x...:.xxx::x...::x:.::....:..........::...:....:..:.......:xx...:.:..:.... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% -12209019 -82021383 +3043 chr4 + 190214555 57993210 57993209 57993283 74 CCTCCCTTCCTCCCTTCCTTCTTTCCTTTCTCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTT chr4 - 94230402 85651755 85651754 85651828 8578575 8578574 8578648 74 CTTCTCCTCCCCCCTGCTCTGTTCTGTAGTTCACCTCTCTTCCTCCCCCCCCCCCCTCCGTTCCTGCACTCCCT .:..:.:...:....x.::.x..::x.xx:..x...::.....::...:...:......x.....x.x:...:. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% -27658545 -66571857 +3068 chr4 + 190214555 58022118 58022117 58022174 57 ATAATAAAAACAAAACAAAACAAAACAAAACAAAAAAAAAAAAAAAAAAAAAGAAAA chr4 - 94230402 4677582 4677581 4677638 89552765 89552764 89552821 57 ACAACAGAAACCAAACCAAACCAAACATTTAAAGTAAAAAAAAAAAAAAAAAGAAAA .:..:.:....x....x....x.....xxxx..:x...................... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 53344536 NA +3003 chr4 + 190214555 58022126 58022125 58022174 49 AACAAAACAAAACAAAACAAAACAAAAAAAAAAAAAAAAAAAAAGAAAA chr4 - 94230402 39607346 39607345 39607394 54623009 54623008 54623057 49 AACCAACCAAAGCAAAACAAAAAAAAAAGTTAAAAAAAAAAAAAGTAAA ...x..x....:..........x.....:xx..............x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 18414780 NA +3015 chr4 + 190214555 58058239 58058238 58058293 55 AAATGTGTATGTGTGTGTGTGTGTATATATGCATATATATGTAAATTTATTCCCT chr4 - 94230402 89821279 89821278 89821333 4409070 4409069 4409124 55 AAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCT ........:...x.x...............::......:.::.:x:.:.x..:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% -31763040 -62467362 +14506 chr4 + 190214555 58063434 58063433 58063868 435 TAGAATAATTAGGGAGGGTAGAAATCATCACAGTGTCAGCC-TTCCTATTACCGAATTGTAAGCCTTCGATACAGAACTGCCTAAAGCAATTGCAGAATGCAATAGATCCAACT----GTATTTCCTTTGGAGCCCACAAAACCATCCAGCTGTAGCCTGCAGGTTCCAAGTGAGGCCCTTCCCCCAATTAGGATTTAATCACCTTGGAGAGCAGCTGAGAATTTCAATCATTATTTTTTTTCCCGAGGTC--------CCATCAATCTTGTCCTTCGAAGTAATGTGATTTTTTTTTCCTCTGCATGAATACTAAATCTTCTTAGTGGAGAAAAATGATGCTAGGAAATAAAGTGGAAGAAACTAATTTTTATAGGATATTTAAACGGAACTCTTGAAGAACTGTTGTTTTAAACCACTCCATTATACTTCCAATTTAATGCCTTGG chr4 - 94230402 45605688 45605687 45606119 48624284 48624283 48624715 432 TGGAATAAGGAGAGAAAGCAGGAATCCTTACACTGTCAGCCCTTCCTGTTATTCAATTGTACCCATTCAATACAGGATTGCCTCAAGCAAT----AAATACACGTGCTACAACTACAAGTGGTCCTTTTGTAGCTTACAGACCCATCCTAGTACAGCTTGCAGGTTTAACATGAGGCACTTCCTGCAAGTAGAATTTAATCACCCTAGAGAACAGCTGAGAATTTCAGTCTTTTTTTTTTTTTCTTCCACCTCTCCAGTCCATCAGTCTTGTTTCTTAAGGTAATTTAATTTCCCCCT-CTCTCAAAAAGTACTAAATCTTCTCAGTGGCAAAAGGGAGCGCT------TAAAGAGGAAGAAAGTGAATTTCAGTGGAAATTCAAAGACAATGCT-----GATTGTTTGCTAGGAGAACATCTGTGTACCTGCAGCTAGATACCTCAG .:......xx..:..::.:..:....x.:...x........-.....:...::x.......xx.x...:......:.:.....x.......----:...:..xxx.x.x.....----..:x.:.:....x...::...:.x......x:x.::...:........:x.x:......x.....:x...x...:...........:.:....:...............:..x..x........:.:xxx::.--------......:......:::.::.:.....x.:....:::::.-....xx.x:.:.............:.....x:...::x:::...------.....x........x.:.x...:.xx...x...:...x:x..:x..-----:.:....xx:.x::.xx..x:.xx.:...:.x..::.x:..:...::. 41M1I49M4D19M4I133M8I39M1D44M6D46M5D48M 287/419 68.5% 432/94230402 0.0% 29/419 6.9% 12457746 NA +3906 chr4 + 190214555 58077655 58077654 58077719 65 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 - 94230402 60979336 60979335 60979400 33251003 33251002 33251067 65 TCTTGTAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ...::x.......x..x.....x...x.....x.x........:.:.....:............. 65M 53/65 81.5% 65/94230402 0.0% 0/65 0.0% -2901681 -91328721 +3333 chr4 + 190214555 58077659 58077658 58077719 61 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::..x...............:.:......::..x.x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -12629920 -81600482 +3717 chr4 + 190214555 58077659 58077658 58077717 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .......x..x.....x...x.....xxx........:.:................... 59M 50/59 84.7% 59/94230402 0.0% 0/59 0.0% -2901683 -91328719 +3678 chr4 + 190214555 58077661 58077660 58077721 61 AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::..................:........::..x.x.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -12629918 -81600484 +3473 chr4 + 190214555 58077663 58077662 58077721 59 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .......x..x.....x...x....xx.x........:.:...:.:............. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% -2901679 -91328723 +3595 chr4 + 190214555 58077663 58077662 58077723 61 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::x..........................::..x.x.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% -12629916 -81600486 +3075 chr4 + 190214555 58077664 58077663 58077725 62 AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAAC---TCTATATATACACATATATACACACACACACA .......x..x.....x...x...x.:---.x........:...:.:.:............. 27M3D32M 48/59 81.4% 59/94230402 0.0% 3/59 5.1% -2901678 -91328724 +3390 chr4 + 190214555 58077665 58077664 58077725 61 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....x:x...............:..........::..x.x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% -12629914 -81600488 +3009 chr4 + 190214555 58077667 58077666 58077722 56 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACAC chr4 - 94230402 70707579 70707578 70707634 23522769 23522768 23522824 56 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ..:....x.:.....x.::..x.x:x.............:.:..........::.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -12629912 -81600490 +3061 chr4 + 190214555 58077670 58077669 58077734 65 AAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACATATATATAC chr4 - 94230402 64433200 64433199 64433264 29797139 29797138 29797203 65 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.....:x.....xxxx.x.:.:.:.........x:.....:......:..:..:...:...:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -6355530 -87874872 +3033 chr4 + 190214555 58077687 58077686 58077747 61 ATATATATATATATATATACACACACACACACACACACATATATATACATATATATACACA chr4 - 94230402 4481692 4481691 4481752 89748651 89748650 89748711 61 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .....x:.:.:.:...:.:....x...:.....:x......:x:xx........:...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 53595995 NA +3774 chr4 + 190214555 58077688 58077687 58077787 100 TATATATATATATATATACACACACACACACACACACATATATATACATATATATACACACAAATATATATATACATATA--------TACACACACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x:.......:.:.....x.x:..::x:..:....:....x:.....:x:x....:.:x:........--------:...x.x........:.... 80M8I20M 68/100 68.0% 108/94230402 0.0% 8/100 8.0% -15043414 -79186988 +3888 chr4 + 190214555 58077692 58077691 58077802 111 TATATATATATATACACACACACACACACACACATATATATACATATATATA--CACACAAATATATATATACATATATACACACACACACATATATATATGTATACGATCAA chr4 - 94230402 73121102 73121101 73121214 21109189 21109188 21109301 113 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAA .:.::..::....x..:.....:.:.....x.x::..:x:......::....--:....:.:.....:.:x::.:.....x.:..:.x....x.x.:.:.::.:..::.x... 52M2I59M 70/111 63.1% 113/94230402 0.0% 2/111 1.8% -15043410 -79186992 +3108 chr4 + 190214555 58077693 58077692 58077756 64 ATATATATATATACACACACACACACACACACATATATA--TACATATATATACACACAAATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..........:..............x..--.x..x:.:......xx..x.:::.. 39M2I25M 49/64 76.6% 66/94230402 0.0% 2/64 3.1% -8827154 -85403248 +3083 chr4 + 190214555 58077695 58077694 58077760 66 ATATATATATACACACACACACACACACACATATATATACATATATATACACACAAATATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..:::.........:.........:....x..x:.x:.x:.::.:....x:...:::.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -8827152 -85403250 +3157 chr4 + 190214555 58106816 58106815 58106864 49 TGATTATAGTGGGTCATTTAATTAGAGTTACTGAACAAAATAAAAATAG chr4 - 94230402 41531133 41531132 41531181 52699222 52699221 52699270 49 TGATTTTAATGGGTCATTTAATTAGAAATACCAAATATAATGAAAATAG .....x..:.................:x...::..:.x...:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 16575683 NA +3818 chr4 + 190214555 58117421 58117420 58117556 136 TTATACATATACAAATGTTTATATTTTTATACATATTTTCATATATATATATATATATATATATATATATAGGAAAAGGGGTATCCATTTATTTTTAACATATTTTTGACCTTTTATTCAATATATCTATGTAAAC chr4 - 94230402 50291206 50291205 50291331 43939072 43939071 43939197 126 TTAAACAGAAGTAAATAAACACACTTT-----GTATTTCCATATGTGCATATATACATATGTATATATACAAGGTAGGAGGTATCCATGCATATT-----AATTGTTCGGCTGTTACTTTATAAATATACAGAAGC ...x...x.x::....:xx:.:.:...-----:.....:.....:.::.......:....:........:.:.:x.:.:.........x:..x..-----x...x..x:x..x...:.:x...x..x..::x..:. 27M5D63M5D36M 84/126 66.7% 126/94230402 0.0% 10/126 7.9% 7826215 NA +3368 chr4 + 190214555 58121240 58121239 58121309 70 AAGCCTAACAGGTAAAACTTCAAGATCCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTGTCTT chr4 - 94230402 16390097 16390096 16390166 77840237 77840236 77840306 70 AAGCAAAACAGGTATATCCTCATGACCCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATT ....xx........x.x.:...x..:..x.:xx...:......:......:.......:::..:...x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 41731143 NA +3118 chr4 + 190214555 58121244 58121243 58121312 69 CTAACAGGTAAAACTTCAAGATCCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTGTCTTGTA chr4 - 94230402 57221687 57221686 57221755 37008648 37008647 37008716 69 CTAAGAATTTGATTTTCAAGGTTCATTTTTTTTCTTTGTTTTTTTTTTTTATTATTCATCTCTCTGATA ....x.:x.x:.x:......:.:...:......:...x............x..x..:.x..x...x:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 899557 NA +17657 chr4 + 190214555 58138760 58138759 58139157 398 TTTATGATGTCAGAGAAACTTCCATAATACTAAATCTGACACTATTAATTTCTCTCCTATAATTGTGTCAATAGCATTTT---GTAATTTAATATTAAATCATTTTTTATA--AATAACAGATTGGGCATCAGTCTGCCTTATTCTGATGTCTGTGGGAGGCAAGCCAAAGATACAGCTGATGAAATACAACCTTAGACAAGCTCCATCTGTCCCATTTAGACGATATACAGTGTCAGATCTCAGTAGCGGAAGTAATAACTGCAAGCTGCTCTCCAGGGCAGACAGCAAGAGAGGGCTACTGATCACATTGATTAAAATAAACAAACCCTTTGGGTGGGTTGTAGTAAGTATAAACTTGAACTAGATAACCACTTTCAAA---GAGATTTCTGCATTTAGGGCCA chr4 - 94230402 45630371 45630370 45630770 48599633 48599632 48600032 400 TTTCTTACATCAGAGACACCTCCTTATTACTAAATCTGACAGCCT--ATTTTCCATGTGTAAACATGTCAATGCCATTTTCATGAAATTCAATATTCCTTCATTTTTTCTTTTACAAAAACGTAGAGCATCGGACTATCT-GCTCTGATGTCTATGGGAGGCCTGCCAAGGACAAGGCTGATGAAATACAGCCTGAGACAAACTCCATCTGTCCCATTTAGGCAATCCACAGGGTCAGGTCTCTGCAGAGAAAGTAATAACTGCAAGATGGTTTTCTAAGCAGACACCGAGAGAGAACTACTGCTCATATTGATTAAAATAAACAAGCCCAGAGGG-AGGTTGTATTAATTGTACATTTGAGTTAGATTACTAATTTCAGATTGTGGCTTTCT--ATTTAAGACCA ...x.x.::.......x..:...x..x..............x:x.--....::.x:x.:...x::.......:x......---.x....:......xxx.........x.x--.xx..x.x:.x.:.....:.x..::..-::..........:........xx.....:..:.x:..............:...x......:...................:.:..x:....x.....:....x.:..x.:................x..x.:.:.x::.......x.:......::......x...:..................:...xxx...-:.......x...x.:..x.:....::.....x..:.x.....:.---x:.x.....--.....:.:... 45M2D33M3I28M2I27M1D195M1D44M3I9M2D11M 296/392 75.5% 400/94230402 0.0% 14/392 3.6% 12508389 NA +3043 chr4 + 190214555 58157537 58157536 58157586 50 CTATGTATGTGTATATATATGTGTGTATATATACATATATATGTATGTGT chr4 - 94230402 43600821 43600820 43600870 50629533 50629532 50629582 50 CCATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT .:....x.......x..:...........:...:x......x....:.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 14556716 NA +3034 chr4 + 190214555 58157544 58157543 58157610 67 TGTGTATATATATGTGTGTATATATACATATATATGTATGTGTGTATATATATATGTATATGTGTGT chr4 - 94230402 71630139 71630138 71630205 22600198 22600197 22600264 67 TGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::.....:::::::.x..........x.x......::...:.x.::..:..x.......... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -13472595 -80757807 +3031 chr4 + 190214555 58157589 58157588 58157638 50 ATATATATATGTATATGTGTGTATACATATATACACCTACATATGTGTAG chr4 - 94230402 81378300 81378299 81378349 12852054 12852053 12852103 50 ATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGATTTGTAG ........:...:.:x.....:..........:.:::....x..x..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -23220711 -71009691 +10468 chr4 + 190214555 58166670 58166669 58166892 223 AGGACAGCTCA-TGGGGCTG-GCTGGCTGGTAGCCAAGTGCACCGGTGTTCTGTTTGCACCATGCCAATCCTTTTGTCACTTGTTAAAAATTCAGTGTTATCTCCTCTCCTAAACATTGCTACCATCTGCCTACACATGAATTTGACAATGATTTTGTAGTAATTGCAGCTGTGTGTTGGATACCAATTATTATTATATAGACTGACCAATACAAATTCACTTTT chr4 - 94230402 45636813 45636812 45637036 48593367 48593366 48593590 224 AGGACAGCACAACAGTGCTGCTCTGGTTGCCAGCCAAGCATTGTGGTGCTCTGTTCACACCATGCCAATCCTTTTGTCACTTGTTAAAA-TTTAGTGTTATTTCCACTCCAAAGCATTGAGACCATCTGCCTACACACGACACTGACAGCTATTATGTGGCACTTACAGCTATATCTCAGATACCAATTACTATACCGCTGGGCAGCTAGAAGAAATTCATTTTT ........x..-::.x....-x....:..x:.......:::xx:....:......::................................-..:........:...x....x..:.....xx................:..xx:.....::x...x...:.:.x..:.....:.:.x.::...........:...xx:::x.:x:::.:.:x.x.......:.... 11M1I8M1I68M1D135M 164/222 73.9% 224/94230402 0.0% 3/222 1.4% 12529857 NA +3209 chr4 + 190214555 58172019 58172018 58172074 56 AAGTTTTTGTTTGTTTGTTTGTTTTTGAGATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 21034595 21034594 21034650 73195753 73195752 73195808 56 AATTTTTTGTTTGTTTGTTTGTTTTTGCAGTTGTCATTTGTGTTTTGCTTTTTTTT ..x........................x::..x.:x...x.x....x:........ 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 37137424 NA +3061 chr4 + 190214555 58172021 58172020 58172081 61 GTTTTTGTTTGTTTGTTTGTTTTTGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 - 94230402 26671554 26671553 26671614 67558789 67558788 67558849 61 GCTGTTGTTTGTTTGTTTGTTTTCTGCTCTTTTTTTCTCCTGCTTTTTGTTTTATTGAGGC .:.x...................:x:xx:.......:.::.x:.....x....x.....:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 31500467 NA +3180 chr4 + 190214555 58178122 58178121 58178171 50 TTCCTCCTTCTTTCTCTCTTTTTTTTTTTTTTTTCTTTTTGAGACGGAGT chr4 - 94230402 49339974 49339973 49340023 44890380 44890379 44890429 50 TTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAGGT ..:........:.......:.............:...x.x..:.x.::.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 8838148 NA +3044 chr4 + 190214555 58185113 58185112 58185159 47 ACACACACACACAAAAAAAAAAAAATAAATAAAAAAAAGAAAAGAAA chr4 - 94230402 10929387 10929386 10929433 83300970 83300969 83301016 47 ACACACACACACAAAAAAAAAAAAATCTTTGAAGAAAAGAAATTAAA ..........................xxx.:..:........xx... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 47255726 NA +3562 chr4 + 190214555 58186232 58186231 58186383 152 AAAAAGAAAGAAAGAAAGAGAGAGAGAGGGAGGGAGGATGGGAGGGAGGGAGGGAGGGAAGGAAGGAGAGAGAGAGAAAGAGAGAGAGAAAGAAAGAAAA----AGAAAGGAAGGAAGGAAGGAACGAGAAG-----------AAAAAAGAAAAGAAAGAAAAGAAA chr4 - 94230402 30533164 30533163 30533330 63697073 63697072 63697239 167 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCACATTTAAATATAATAAGAAAGCATGGAAA ...x.:....:........:.::::.:.:...::..:x..x..:::..x:.:..xxx:.::x..:..xx..:.x....::.x:::..:...:.:......----:.......::.:.:x..:.xx:.x.:..-----------...x.x:.x.......x.x:.... 100M4I28M11I24M 91/152 59.9% 167/94230402 0.0% 15/152 9.9% 27653068 NA +9204 chr4 + 190214555 58188373 58188372 58188716 344 CTGACTCTTGTTTTAAAGCAAACAAAACTCTTCACTATTTTAAA-AGATTAACAA--TGTCCCAGATAGATTTATTATTCGTTCGGTATACAGCATCACTCTGT-TGCCATGTTTGACACTTCCAATTTCAATTTATTTCCTCACCTCAGGGTAACCTCAGATCTTAGATCAATGTCATTTGATAACAGAGTACAATTCTGCATGACATATTCTCAGTTGCCATAGACAATGCTTTGATGAACGCCTTTAAAGTAGAATAAATCTCTTATGCTATAAA--ACAAATGGCCTTGTATACTT-TTGCAACAATAATGAATACT-TTTCAGGGGTAAAAATGTCAACAAAAATTT chr4 - 94230402 45640806 45640805 45641155 48589248 48589247 48589597 350 CTGTTTCTCAGTTAAAAGCAAACATGTCTTTTTAGTACTCCAAACAGCATAAGAAGACATCAAAGATTGATTTAGTATTAATTTGGTGAAGGGCTTTGTGCTGTATGCTGTGTTAAACAGCAATGGTTTCATTTTATT-CCTCACCTTAGGGTAATTTCCAACCCTAGATTAATATTATTCGTTAAGAGAATGCAATTTTATAAGATACACTTTGTGCAGCCACAGAAAATG-TTTGACAGGTACTGTGCAAGCAGAATAATTCTCTGAAATCATAAAGGAAAAATGGCTCGCAGGACTTGCTGAAATAACTACAAATATTGTCTTAGAAATCAAAACATCAAGCAAAACTT ...x:...::x..x..........x:x..:..:.x..:.::...-..xx...x..--::..xx....x......x....x:..:...:x.x:..x.:::x....-...::....x:...x:xx:::.....x......-........:.......::..x:.:.:.....:...:.:...:.x...x...:.:.....:.::.x..:.:.:.:.xx.:x....:...x....-.....::::::.:x.xx...:.......x.....x.x:::.....--.x.......::xxx:x....-:..x..:..:x.::....:.-.:.:..:::.x....::....xx....:.. 44M1I10M2I47M1I33M1D93M1D45M2I20M1I20M1I30M 221/342 64.6% 350/94230402 0.0% 10/342 2.9% 12547567 NA +3433 chr4 + 190214555 58193889 58193888 58193978 90 AAACTGTGGTATATATATGTGTATATAGGTA-------TATATGTGTGTATATATGGGTGTATATATACACACATATGTGTGTGTATGTATATATGG chr4 - 94230402 70982587 70982586 70982683 23247720 23247719 23247816 97 AGGCTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGG .::..:.xx:........:.x...x:.x...-------.x:x.......:.:....x.....:....::x..:.x.........:..::.:.:.... 31M7I59M 62/90 68.9% 97/94230402 0.0% 7/90 7.8% -12788698 -81441704 +3374 chr4 + 190214555 58193976 58193975 58194084 109 TGGGTGTATATATACACACATATATACACA----CATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGTATATAT--GTGTGTATATATACACACATATGTGTGTGTATAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..x.::.::....x..:...:.........----...:x..:::..:..:.:x:..:.:.x..:......x...:....--:.::.:x:.:.x.x.....:....:.:x.:.x.. 30M4I45M2I34M 70/109 64.2% 115/94230402 0.0% 6/109 5.5% -14927126 -79303276 +3065 chr4 + 190214555 58193980 58193979 58194068 89 TGTATATATACACACATATATACACACATATGTGTGTATGTGTGTATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACAC chr4 - 94230402 17853469 17853468 17853557 76376846 76376845 76376934 89 TGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATGACAGTTCACAC ...x.....:....:..:........x:..xx.x......::.::..:...x.x..:..:...:x.x.x:.:..::.:xxx:.x..... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 40340511 NA +3544 chr4 + 190214555 58194025 58194024 58194110 86 ATATATGTGTGTATGTGTGTATATATGTGTGTATATATACACACATATGTGTGTGTATATATGTGTGTATATATACACACATATTT chr4 - 94230402 35554961 35554960 35555046 58675357 58675356 58675442 86 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAGTTTT ......x..x..:......:.:.....x...........::..:.:.x:x:......x.x..x::x..x:.x.....x...xx... 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% 22639064 NA +3669 chr4 + 190214555 58194040 58194039 58194103 64 TGTGTATATATGTGTGTATATATACACACATATGTGTGTGTATATATGTGTGTATATATACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x...:....:..:....x....:.xx........:...:.....x:.:..... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 20831000 NA +3577 chr4 + 190214555 58194076 58194075 58194139 64 TGTGTATATATGTGTGTATATATACACACATATTTGTGTGTATATATGTGTGTATATATACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x...:....:..:....x....x.xx........:...:.....x:.:..... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 20831036 NA +3482 chr4 + 190214555 58194284 58194283 58194386 103 TGTATATATACACACACGTGCGTATATATGTGTATATATGTGCACGTGCACGTGTATGTGTGTATATACGTGCACGTGTGAGTGTATGTGTGTATATACGCAC chr4 - 94230402 39267121 39267120 39267213 54963190 54963189 54963282 93 TGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCA----------TCTGTATGAATATACAAAC .....:..x.x.x.x.xx.x......x......:...:x.:.......xx:....:.....:....x::.....----------.x...:..x......:x.. 74M10D19M 67/93 72.0% 93/94230402 0.0% 10/93 10.8% 18927163 NA +3226 chr4 + 190214555 58194365 58194364 58194431 67 GTGTATGTGTGTATATACGCACACGTGTGTGTATGTGTGTATATATGCGCAAGTGTGTGTGTATATA chr4 - 94230402 39267142 39267141 39267208 54963195 54963194 54963261 67 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA ..:..x:.....:...:x..:......xx...:............x.:.::x:.x...:..x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 18927223 NA +3035 chr4 + 190214555 58194429 58194428 58194514 86 ATATGTGTATATATATGCACGTGTGTGTATATATGTGTATATATGTATATACATGTTTATACATATACATATGTGTGTATATATAC chr4 - 94230402 36547797 36547796 36547882 57682521 57682520 57682606 86 ATTTGTGTGGATGTATGCACATATGTGTAGATATGTATCTATCTAAGAATTCAAGACCAGACATAAACAAAGATTTGTTTTCATAC ..x.....:x..:.......:.:......x......:.x...x.:x:x..x..x.x::.x.....x...x.x:.x...x.x:.... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 21646632 NA +17278 chr4 + 190214555 58203992 58203991 58204332 341 AAACTTCATAGGGAATATT-------CAAGAAAAATGCAGCTTTAATTTTAATATGCACATGATATCAATTAATATATTCACATATGCAAATATGAAGGCAATGACCCTGATTCTGAA-GCTTGTTATTTCTGGAGTTGGCATATGGCTCTTTCTAACAGCAGACATAATGATTTCAATAAATTAGCTGCTAATGCCATGTAATGAACTCTGATTTGTGTTAATTTGGCCATTACTTAGTAATTTTATGTTAATTTTTTTAAAAAATCAGTTTTG-AAGGCA--GTATTAGAATTTCATTTTCCATCTAACATTTTAAAAATAAACAAGAAAAAG------ATTTTGATTCAGATGTT chr4 - 94230402 45644543 45644542 45644895 48585508 48585507 48585860 353 AAAATTCTGAGTGAATATTTCAGCAGCAGAAAACGTGTGGATTTAATTTCAATATGCACAGGAGATCAATTAATGTATTT-CATATGCAAATATGACAGCAATGACCCTGATTTAGAACGCTTGTTATTTCTGAAGTTGGCATATGGTTCTCTCTAACAGCAGGCAAAATGATTGCAATAAATTGGCTCCTAATGCCATGTAATGAACCCTGATTTGTGTTAATTTGGGCAGTACTTAGCAATTTCACGTTAATTTTTTT----AATCAGCTTTGTAAGGCACTGTATGTGAGTTCAACTTCATGTTTGGGTTTTTATCAATGCTAAGAATACAGTCTGGTATTTAAATTCAGCTTTT ...x...xx..x.......-------..::...x:..::.x........:..........x..x..........:....:-...............x:...............:x...-..............:.............:...:...........:..x.......x.........:...x...................:...................x..x.......:.....:.:............----......:....-......--....xx..:..:x.:..:x::.:.::xx.....xx...:xxx.::.x.x..------....x:......x.x.. 19M7I54M1D37M1I141M4D11M1I6M2I51M6I17M 272/336 81.0% 353/94230402 0.0% 22/336 6.5% 12559449 NA +5846 chr4 + 190214555 58228224 58228223 58228416 193 GCAATTTG---TGAGCAGGTAA--------TTTTTTTTCACAAACCTTATAACCCATGAAGTAAACCATGCACAGATAATCCGCCTGTTCTCCAGGCTTCTTTTGATTAACTGCATAAAAGAGCAAAGATTTATGAGGGGATTTTGTTTCTGCATTGACCTCTTGTGGTGCTCCTTTCAGAGTATGAAAAATGGCATCATCTGA chr4 - 94230402 45648665 45648664 45648867 48581536 48581535 48581738 203 GCAATTTAAAATAAGCAAATAAGTCACATTTTCCCTCCCTCTGAACTTACGGCCTCAATTGTGAACAAAACACATCAAATCCTTCTCTTCTCCAATTTCCCTTTGGTGAACTGCATAAAAGAAGAGAAATTCACT-GGGGAGTTTGATTTTGCAGTGATCTCTGGTGGCCATGCTTCCTGAATATGAATAATAACAGCGTCAGA .......:---.:....::...--------..:::.::.x.x:.x....:::..:xx:xx..:...x.x:....xxx.....x:..x.......:x:.:.:....:.x..............:x.:.:...:.:x-.....x....x..:....x...:....x....:xx.x...:.x..:......x...::..x.:..x.. 8M3I11M8I105M1D68M 127/192 66.1% 203/94230402 0.0% 12/192 6.2% 12579559 NA +3260 chr4 + 190214555 58252417 58252416 58252465 49 AAAAACAAAAAACAACAACAACAAAAAAAAAACTAGAGCTCTAGTCCTG chr4 - 94230402 79656120 79656119 79656168 14574235 14574234 14574283 49 AAAAACAAAAAACAACAACAACAAAAATAAAAAAACAACCCGAGTCCTG ...........................x....xx.x.:.:.x....... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% -21403703 -72826699 +3145 chr4 + 190214555 58283815 58283814 58283912 98 CCTTTATATGTATCT-ATATAAAGAATATATATATA-GATTCAATATATATTTAGATTCATAGATATATTCTTTATATATATTCTTTATATATATATTCT chr4 - 94230402 36586094 36586093 36586192 57644211 57644210 57644309 99 CCCCCATAT-TATCTCATATAATCACTGTATTTAAACAAATCAGATCTTATTTTGATTTACACATATATTATTTATATATATTCATTTCACATATATTTT ..:::....-.....-......xx.x.:...x..x.-:.x...:xx:x.....x....:.:.x.......x.............x..x:.:.......:. 9M1D5M1I20M1I63M 71/97 73.2% 99/94230402 0.0% 3/97 3.1% 21697721 NA +3303 chr4 + 190214555 58287250 58287249 58287357 108 CCCTTACTCTTGGTCTTTCTTTCGCCCTTCCTCTTTTCTCTCTCTCTCTTTCAACCTCTCTTCTTCCTTTCTTCCTTCCTTCGTTGTTC-CTTTTCTTTCTTTCCACTT chr4 - 94230402 78374923 78374922 78375028 15855375 15855374 15855480 106 CCCTT--TTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTC-TTGTCCACTTCTCTCTCTTTACTCTT .....--.:.:.x......:.x:x.::.........::...........:.x:.:..:..:::.xx...x:::xxx..:...-....:.-...:...:.....x.x... 5M2D75M1D6M1I19M 71/105 67.6% 106/94230402 0.0% 4/105 3.8% -20087673 -74142729 +22458 chr4 + 190214555 58288294 58288293 58288832 539 ATAGGTAAACTAGATTTTAGTACACAG-ATGTCTTTTCTTACACAA-AACCAGACAATTGCAGGTTTGAGCAGCTTATTGTATAGTCATTGCTGCCTCTTCAATAACTCATTTTGATATTTTGTAATTTGCCAAAATGTGCCTTTGTGATCCCACAGGCTCTTAACTACTTTGTAATGAGTGTGTATGAACAGATGGAAAATGTTTTCAATTTCAGAGAAAACCACTAATGGATGTTACCAGCTATTAGAAAAGCTCAGGTGGCTCCGTTTTCCAAGGAAAGGTATTGTCATAAAACTCTTCATTTTTCAATGAAATGTTTGCTCATTTATATCTAGATGGTAA-TTTAAGACT-----TCAAAGTCTTAACAGATTAGAACGATAGTTGGAAATTATTCAGTGCTAAATAGCCTGGAAATCCAATCTCAAGAATCTCACCTGAAAACGGTAAT--GCCAATTCAGGTCATTTTATTA--GAACAACATGAACTACTATAAAAACAA---------------TTTCCCTAAAGAAGTAGATAAAGCAATTTAACTA-AAAAGTTAAA chr4 - 94230402 45660890 45660889 45661439 48568964 48568963 48569513 550 ACAGGCCAGACAGGTTTTAACTAATAGGATGTCCTCAGTGACTGAGGAAAGAAAAAGTTGAAGGTTT-AGCTACTTATTACAAAGTCATCCCTGCTTCTTCAATAACTCATTTTGATATTTAGTAATTTGCAAATATGTGCCTTCGTGATCCCATAGGCTCTTAAATTCTTTGTAATGAGTGTGTATGAACAGATGGAAAATGTTTTCAATTTCAGAGAAAACTGCTAATGGATGTCACCAGCTATTAGAAAAGCTCAGGTGGTTCAATTCTGGGAGAACAGGTATTGTCATAAACTGTCTCATCTTT-AATGAAATGTTTGCTTATTTATACCTTGATGGTAAGTTCAAGGCTGTCTGTACTAGTCACAACAGATTAGAAC---------------TTGACAGTTAAATAGTCCAGAACCTTACATCCAAATATTTGACCTGAAAATAACAATAGGTTGTTATAAATCATTTCAGTATGAAAGAAAATTAATCACTGGAAAAACAAGGTTATACTAATTTCCTTCCCTATCCAACAGGAGtaaaaaattaaaatgtaaaaattaaa .:...:x.:x:..:.....::xx.:..-.....:.:xx.x..xx.:-..xx.:.x.:...x......-...x:......::.x......:x....:.........................x.........x..x.........:.........:..........x.x.......................................................::...........:..........................:..x:..:.xx:..:.x...............x:x::....:...-...............:.......:..x........-..:...:..-----.xxx....x:.............---------------..x.xx.:.......:.::...x:::.xx::...:x..:.x.........::::...--.:::x.x:.::......:.x..--:..x..x..x..::...:x........---------------:.......xxx..xx:..xx..:x....x..x.:-....:..... 27M1I18M1I20M1D240M1D35M1I9M5I23M15D57M2I22M2I27M15I34M1I10M 397/522 76.1% 550/94230402 0.0% 45/522 8.6% 12627404 NA +3485 chr4 + 190214555 58302351 58302350 58302425 75 AACTGGAGATGCATA--TTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCAAAAAAAAAACTTGCTTGTG chr4 - 94230402 79443280 79443279 79443356 14787047 14787046 14787123 77 AACAGAAAACACATACTTTGATGAAAAAAAAAAAAAAAGCAAAACAGAACAAAAACCCAAAAAACTATTTGCTTATG ...x.:.:.::....--...x.:...............:x....x.:..x...x...x......xx.:......:.. 15M2I60M 57/75 76.0% 77/94230402 0.0% 2/75 2.7% -21140929 -73089473 +3049 chr4 + 190214555 58324557 58324556 58324618 62 TATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACA chr4 - 94230402 8395795 8395794 8395856 85834547 85834546 85834608 62 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:............. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 49928762 NA +3349 chr4 + 190214555 58326221 58326220 58326306 86 ATATTAATATATGTATTATATAAATATATATTTGTATA----------TGTATTTATTTTCATATGTGTCTATATATAACATATATTTT-TATAGAG chr4 - 94230402 31376969 31376968 31377064 62853339 62853338 62853434 96 ATTTTAATGTATTTATTACATAAATATACACGTGTATATGGACACATTTGTGTTTCTTTTTATA-GTGTGCATATATAAAGTGTAGTGTATACAGAG ..x.....:...x.....:.........:.:x......----------...:...x....:...-....x:........x:.:..x.x.-..:.... 38M10I16M1D24M1I7M 67/85 78.8% 96/94230402 0.0% 12/85 14.1% 26949252 NA +3038 chr4 + 190214555 58333206 58333205 58333288 83 AAATAAAGGGATAGAGGAAGAG--------CTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCC chr4 - 94230402 94016291 94016290 94016381 214022 214021 214112 91 AAGTAAGCAGATGGCTGAAGAGGAGAGATGTGGCCAAGATAATGGAAGATGACAAAGGAAAAAAAGAAAAGAAAAAAAACCAACAAATGCC ..:...:x:...:.xx......--------:x:.....xx.......::::.x...::.......:....:........xx..x...x... 22M8I61M 58/83 69.9% 91/94230402 0.0% 8/83 9.6% -35683085 -58547317 +11720 chr4 + 190214555 58368389 58368388 58368701 313 GCATACTGCCATTACAGCATCCTTTAATAAGCAAACACATCTATTCAATGTCACAGCAAATTAGAAAGTACTTATTTCTGTTCAGTGAGCTAGATGAAATCAATAATCACTGGGGAGTTGCCACTATAATTCATTAGAGGCATTCACTGGCCCTCAGTAATCAGCTCAGAGAATGGAGCCAA-AGTCTGACTTATCTGGGGAGAGGAAGTTAGGATCAA--ATGTCTCAGCTCAAGTGAAAATAGTATCTGATAATCATT--ACATTATACACTTTTAGACTTCAAAATAA----AGTTCTTTCTAAATAATGGAAGAAATG chr4 - 94230402 45569135 45569134 45569449 48660954 48660953 48661268 315 GCATGCTGCCACAGCTCTCTCCTTTAATAAATAAACACATCTATGCAATGCCACAACAAATTAGGAACTATTTATTCCTGTTCATTGAGCCAGATGGAATCAATAATCAGCGGGGAGCTAGCAC------TCATTAAAGCAGCTCTCGAGGCCTCAGCGATAGGAGT-GAGAAGTGACCCACTAGCCAGGTTTCCCTGTAGAGAGGAAACGGTGCTAAAACATTTCTCAGCTCAAGTGAAAATAACGGATAATACTCACTTGACATTGCACCCTTTTACCATCTAAAACAGCTGTGGTTTCTCTTAAATAATACATGAAATG ....:......:x:.xx:x...........::............x.....:....:........:..x..:.....:.......x.....:.....:............x:......:.:x...------......:..xx::..x.x:.x......::..x:.xx:-.....xx..x...x-..:.x.::..x:...x:........::x:x.x.x..--..x....................:::xx.:...x...:.--.....::..x......xxx.::....:.:----:...::.::........:x.x...... 124M6D37M1D14M1I36M2I39M2I29M4I27M 219/306 71.6% 315/94230402 0.0% 16/306 5.2% 12799254 NA +3841 chr4 + 190214555 58393647 58393646 58393716 70 CTCCTGGGTTCAAGTGAATCTCCTGTCTCAGCCTCTCAAGTAGCTGGCATTACAGGTGCCCACCACTATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.............xx..x.xx.x........:............x.:....x...--.......:.. 58M2D10M 56/68 82.4% 68/94230402 0.0% 2/68 2.9% 40196508 NA +3382 chr4 + 190214555 58394658 58394657 58394817 160 TTTAAAGTCTACAAAAATATGTGTATGAATATATGTATTTATAAATTATAATAAATGTACAGTAATT---------------CCTCTCTTAACTTTGTCAATAGGTTCTTGGA---------------AACTGAGACGTTAAGAGAAGTGACA----------TAAATTTT-TTTTTTAAATCAAGGTTGTAAGAAAACTA chr4 - 94230402 52487163 52487162 52487360 41743043 41743042 41743240 198 TTTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCAGTAGTTTTTAAAAAGGTGGAACCTTTATAAATTTGG---AAGGGTTTTTGAATTCTGTAAGTAATATAAATGAGTTATTATCAAAATTAAAAAATATATATCTAGATTTTCCTTTTTATTTTGAGATTGTGGTAAAACTA ...x..:.x:...x.x....:x:..:::..:.....:.x.........x....x....:.....:..---------------...:.x.x..:..x.---.x:....:...:.---------------..x....x::...xx.:..x.:.x.----------..:.....-:......xx.::..:....::x....... 67M15I15M3D13M15I25M10I8M1I29M 109/157 69.4% 198/94230402 0.0% 44/157 28.0% 5907495 NA +3261 chr4 + 190214555 58449122 58449121 58449263 142 TGGTGTTTTTTTATTTTTTATTTTTTATTCCCAAGAATTCTTACTCTGATATTCCCCTTGCGTTTTTGTTTGTTTGTTTTTTTGTTTTTTCTGGTTCTTCTCCTCAGT-------------AATGAGTCACAATAAACGCTTTTATTGGGTTGCT chr4 - 94230402 61605790 61605789 61605931 32624472 32624471 32624613 142 TAGTATTATTCAAGTTCTTCACTTTTTCTCCAAATTTTTTCTACTCT-----------TGTGGTTTTGTTGGTTTGTTTTTTTTTTTTTTTTTGCTCTCCTTCATTGTGCCATGCATGTTGAATAAG--ATATTTAGCCCTTTTAGTGCGTGGCT .:..:..x..:x.x..:..xx:....x:...x..xxx..::......-----------..:.x.......x............x......:.x.:...:..:.x:x..-------------...:..--.:.x.x.:.x......x..x..x... 47M11D50M13I6M2D26M 90/129 69.8% 142/94230402 0.0% 26/129 20.2% -3156668 -91073734 +3062 chr4 + 190214555 58464303 58464302 58464372 70 CTCCGTCTCACACAAAAAAACAAACAAACAAACAAAAAAAAACAAAAAAAA----AAAACAATGAA-ATCTATCT chr4 - 94230402 64558406 64558405 64558480 29671923 29671922 29671997 75 CCCCCCTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAATAAATATCTCTCT .:..x:::.x.x.x.............................x....x..----.x..x...:..-....x... 51M4I11M1I8M 56/70 80.0% 75/94230402 0.0% 5/70 7.1% -6094103 -88136299 +3046 chr4 + 190214555 58464303 58464302 58464359 57 CTCCGTCTCACACAAAAAAACAAACAAACAAACAAAAAAAAACAAAAAAAAAAAACA chr4 - 94230402 52375100 52375099 52375156 41855247 41855246 41855303 57 CTCCCCACCAAAAAAAACAACAAACAAACAAACAAAAAAAAGCCCCAAAATAAAACA ....x:x:..x.x....x.......................:.xxx....x...... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 6089203 NA +3257 chr4 + 190214555 58464307 58464306 58464363 57 GTCTCACAC--AAAAAAACAAACAAACAAACAAAAAAAAACAAAAAAAAAAAACAATGA chr4 - 94230402 51829425 51829424 51829483 42400920 42400919 42400978 59 GTCTCATTCTTAAAAAAACAAACAAACAAACAAAAAAAAACTTGAATGAGAAAGAATGA ......:x.--..............................xx:..x:.:...x..... 9M2I48M 48/57 84.2% 59/94230402 0.0% 2/57 3.5% 6634882 NA +3378 chr4 + 190214555 58464314 58464313 58464380 67 ACAAAAAAACAAACAAACAAACAAAAAAAAACAAAAAAAAAAAACAATGAAATCTATCTTTACTCTA chr4 - 94230402 87529345 87529344 87529411 6700992 6700991 6701058 67 ATAAAATAACAAACATACAAACAGAAAAAAACAACAAAACCAAAGAATTAAATGAATCATTTCTGTA .:....x........x.......:..........x....xx...x...x....xx...x..x..x.. 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% -29065031 -65165371 +3099 chr4 + 190214555 58464317 58464316 58464359 43 AAAAAACAAACAAACAAACAAAAAAAAACAAAAAAAAAAAACA chr4 - 94230402 50998073 50998072 50998115 43232288 43232287 43232330 43 AAAAAACAAACAAATAAACAAAAAAAAACAACGACCAAAAACA ..............:................x:.xx....... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 7466244 NA +3004 chr4 + 190214555 58567262 58567261 58567315 54 TTTCTTTTTTCCTTTTTCCTTCCTTCTTTTTTGTTTTGTCTATTTTTTCTTGAT chr4 - 94230402 79920083 79920082 79920136 14310267 14310266 14310320 54 TTTCGCTTTTCTTTTTTCTCTCCTGCTTGTTTCTTTTGATTCTTTTTTCTTAAT ....x:.....:......::....x...x...x.....x:.x.........:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -21352821 -72877581 +3030 chr4 + 190214555 58580552 58580551 58580624 73 TTCTGTAAGTTACCTGTTCACTCTGATGATAGTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGCAGAAGCTCTT chr4 - 94230402 59902242 59902241 59902314 34328089 34328088 34328161 73 TTCTACAATTCACATTTTGTTGCTTGCTATAGAGTCCTTTTTTTTTTTTTTTTTTTCCTGTGCAGAACCTGTT ....::..x.:..x.x..xx:x..x::x....xx.::...................x..........x..x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -1321690 -92908712 +3120 chr4 + 190214555 58591481 58591480 58591525 45 AAATAGCAAAAATAAATAAATAAATAAATAAAAGCAAGGAACACT chr4 - 94230402 3840975 3840974 3841019 90389384 90389383 90389428 45 AAATAGCAACAGTAAGAAAATAAATAAATAAAAGCAAGAGACATT .........x.:...:x.....................::...:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 54750506 NA +3110 chr4 + 190214555 58603496 58603495 58603574 79 AAAAATAAAGTTTGATTTGGTTTTACTGAGTTTTCAAGTTTATATCCCTTCCTTTCTTTTTTTTTTTTTTTTTTTGAGT chr4 - 94230402 3462413 3462412 3462491 90767912 90767911 90767990 79 AGAAGCAGAATGTGATACATTAGCATTGATTCTGTGGTTTCATATCACTTCCTTTTTTTTTTCTTTTTTTCTTTTTAGT .:..::.:.:.x....x::x.xx:.:...x.:.x:::x..:.....x........:......:.......:....x... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 55141083 NA +3179 chr4 + 190214555 58630182 58630181 58630305 124 TAAAGAAAGGTAAGAAACTTTGGATGTCATT--------AAATATCTTAGTCTAATCCTAAAGTGTATGAGAGTGTTTAGTAAAAAAAAAAAGTCCTTTAAAAATTTATTAAATAAAAATATTTAAAAATAA chr4 - 94230402 49075413 49075412 49075543 45154860 45154859 45154990 131 TAAAGAGGTATGGGAGACTTGTAGTGATATTTTCTGGCCAAATTGATTAA-CAAATTCTCAAGTGGAGGAGAAGACTGAGTAAAAAAAAAAAGTCATTGGAGAACAAAATAAAAAGAAACACATAAAGCTGA ......::x:.::..:....xx::..x:...--------....xxx...:-.x...:..x.....x.x....:x::.x.................x..x:.:..:xx.x....x.:...:.:x....:x.:. 31M8I11M1D81M 80/123 65.0% 131/94230402 0.0% 9/123 7.3% 9554769 NA +3649 chr4 + 190214555 58689684 58689683 58689809 126 TTTTCTTTCTTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTGTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCTTTTTTTCT chr4 - 94230402 81461666 81461665 81461788 12768615 12768614 12768737 123 TTTTTAATTCTTCCTTTTCTTTTTTTC--TCCTGACTTC-TCACCATGTTTCCTTCATTAAATGTCATCCATTCCACTTCTTGCTGTGCCTTCCCTCCCCCTTCTCTTCTTGCCCCCTTCTTGTCT ....:xx.::............::...--....xx....-..x.:x...:..:...x..xxx.x..x.:.x...:x::.:..x::x.x......:...::.:.:.....:.x..::...:..x... 27M2D10M1D86M 80/123 65.0% 123/94230402 0.0% 3/123 2.4% -22771982 -71458420 +3760 chr4 + 190214555 58689684 58689683 58689817 134 TTTTCTTTCTTTCCTTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTGTCTCTTTCTT-------TC---------TTTTTCT-------TTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCTTTTTTTCTCTCTCTCT chr4 - 94230402 9693678 9693677 9693834 84536569 84536568 84536725 157 TTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ....xx..:..x....:.:xx..::.:.:...:xx:::.:...x.:.:...:.:....-------..---------....x..-------.....:..:..::...:....::...:.:x......x.:..:x..x:..:...:....:..:..:.. 58M7I2M9I7M7I67M 88/134 65.7% 157/94230402 0.0% 23/134 17.2% 48996006 NA +3037 chr4 + 190214555 58689702 58689701 58689763 62 CTTTCCTTCCTTCCTTCCTTCCTCTCTCTGTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 57389177 57389176 57389238 36841165 36841164 36841226 62 CCTTCCTTCCAACCTTGAGTTCCCTCCCTACCTCTGTCTTTCTCTTCCTAGCTTCCTTTCTT .:........xx....xxx.:.:...:..::....x.......:..:..xx...:....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 1300525 NA +5063 chr4 + 190214555 58717164 58717163 58717468 305 ATAAATTGTATTCTATTGAATTAGCATTGGAGATATCAGTAGGGGTTATTTTTA---GCTTAAAACTACATACATACCTATACAATTTATATATATATGGACAG-AGAAATAATTGTAAATATATAATTATACATAAATTTGAATAGATTTATACAGCTTAGAATATATATTATATTATTATATTTTATATTTATGAATATTATAAAATATATAGATATGTGTATTTTTATAATATATATTATATTAGGATACATATATATATAGAGAGAGAGAGAGGCAGAGAGACAGAGAGAGAGAGAGGGAGACAG chr4 - 94230402 89611789 89611788 89612064 4618339 4618338 4618614 276 ATCAACTGCAACCTACAGGGTTAG-ACTGGAACT-TCAACAGAAGCAAATATTACATTCTTTtatatacatacatatatata-----tatgtatatatgtattgtatatgtaatctaacacatatatatatatataA-------TAGAAT-ACGAAGCATAGA--------TAAATCCTTATCTATC-TCCGTATTATTAGTACAACATATA-----ATATATAATAT----ATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAG ..x..:..:.x:...:x.::....-.:....:x.-...::..::.:x.x.x...---x...xx.xx..........:x....-----...:........x.:x.-.x.x:....:xx.x.:.....xx....:....-------....x.-.::x...x....--------..x..:x....x.x.:-.x:x...x.x..x..:..x.....-----..:.:..x.x.----..x....:.....x::....:..::...x::...............x.......:.::.x:x:...:..::.:.... 24M1D9M1D19M3I25M5D17M1I32M7D6M1D12M8D16M1D24M5D11M4D77M 184/272 67.6% 276/94230402 0.0% 37/272 13.6% -30894625 -63335777 +3009 chr4 + 190214555 58732598 58732597 58732641 44 TTAAAATATTGGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTAA chr4 - 94230402 13534422 13534421 13534465 80695938 80695937 80695981 44 TTAAAATGTTAGGGGTTGTGTGTGTGTGTGTGTGCTTGTGTTAA .......:..:.:xx...................:x........ 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 45198176 NA +3102 chr4 + 190214555 58742039 58742038 58742162 124 AAAAAAAAAAAAAAGACAATACTAAATTATAAATATAAAATTAGGTACAAAATCAAGTACTTGTTTATAATGAGAAAATAAATAAATTACAAAATAATTACAAACAAAAAACCAAATACCAGAA chr4 - 94230402 57593519 57593518 57593635 36636768 36636767 36636884 117 AAAAAAAAAAAAGAGAAAATACAAAACCAAAAATAGACTTCCAGATCCACTCTATAGGTGTAATTTACAATAAGAAAGCAACACTAATAAAAAAGA-----AAACAAAAAA--AAACACCAAAA ............:...x.....x...::.x.....x.xxx::..:.x..xxx.xx..xxx.x:....:...:.....::..xxxx.x..x....x.-----..........--...:....:.. 96M5D10M2D11M 80/117 68.4% 117/94230402 0.0% 7/117 6.0% 1148520 NA +4296 chr4 + 190214555 58762065 58762064 58762182 118 TGTATATACATATATATATACACATATGCGTATATATAAAATATATATATACACATATGCGCATATACAAAATATATATACGCATATGCGCATATATAAAATATATATACGCATATGC chr4 - 94230402 44659994 44659993 44660102 49570301 49570300 49570409 109 tatatatatatatatatataAA-ATATGCGTAGATGTAAAATACATATACACACTTCTATAAATACGTGATTTATATATAAGCA-------ATAGGCAAAATATA-AAGCGTAAATGC .:......:...........x.-.........x..:.......:.....:....x.x.:::x...::::.xx........x...-------...x::........-.x:..:.x.... 22M1D61M7D14M1D12M 82/109 75.2% 109/94230402 0.0% 9/109 8.3% 14102071 NA +3019 chr4 + 190214555 58768154 58768153 58768230 77 CTGTAATCCCAGAGAGCTATGGAGAAATGTGTGTGTGTGTGTGTGTGTATGTTTGTGTGGTGTATGTGTTTACAAAA chr4 - 94230402 92830140 92830139 92830214 1400189 1400188 1400263 75 CTGCAGTCATGCATAGCTATTGCAAAATGTGTGTGTGTGTATATATATATATATGCTTG--GTATGTTTTCATGAGA ...:.:..x::x.x......x.x:................:.:.:.:...:.x..:x..--......x..:.::.:. 59M2D16M 52/75 69.3% 75/94230402 0.0% 2/75 2.7% -34061986 -60168416 +3699 chr4 + 190214555 58801666 58801665 58801758 93 ATTTACATATATTTATATATATTTACATATATTTATATGTATAAATACATATGTGTGTGTGTATATATATATATAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398869 60831534 60831533 60831623 90 ATATACACACATGCGCACAGAC---CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGA ..x....:.:..x:::.:.x.:---......xx.:...x..x..:.:::::.......:.::.:.......:.:.............x..... 22M3D68M 62/90 68.9% 90/94230402 0.0% 3/90 3.3% 25402886 NA +3699 chr4 + 190214555 58801674 58801673 58801914 241 ATATTTATATATATTTACATAT-ATTTATATGTATAAATACATATGTGTGTGTGTATATATATATATAGAGAGAGAGAGAGAGAGAACACTTAGTCTAACAACAGAAATAAATATTGTTTAGGCCTGTC--ACCGTGGTTTATGCCTGTAATCCCAGCACTTTGGGAGGTCAAGGTGGGCA-GAACACAAGGTCAGGAGTTCGAGACCAGCCTGACCA-ATATGGTGAAACC-----CCATCTCTACTAAA chr4 - 94230402 33398780 33398779 33399007 60831396 60831395 60831623 228 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAG------------------ACAGAGATAGATAtgtatgggaactgttgaatcatagcctgaacctctgat-tgaccacctgaggaaagcac--tgagcaggagcacaggtgaaggcaattcag--ctgtgtgaccagaaggggtggagccaggctccatctctcctaga ....x:.:.:..::x:...x.:-..x..x......xx.x.x:.:..:...........:.:.......x.x............------------------.....:...:....xxx.x:.:x....:--.:.:.:.::.:x:...x.:..-:x.x...:.x:...::x..x--..:...-..:....:.xxx...x:x.:x..--.x.:x......-.x:x....:.:..-----........x...:. 22M1I60M18D28M2I21M1D20M2D6M1I23M2D11M1I13M5I14M 144/218 66.1% 228/94230402 0.0% 33/218 15.1% 25402894 NA +3262 chr4 + 190214555 58801694 58801693 58801758 65 ATATTTATATGTATAAATACATATGTGTGTGTGTATATATATATATAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398867 60831536 60831535 60831600 65 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGA ....xx..:.:.x..:.x:::.::........:..:.:.......:.x.............x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 25402891 NA +3215 chr4 + 190214555 58822136 58822135 58822180 45 TACAAAGATAGAAATTGTAAAAAAAAAAAAAAAAAAAAGAAAAAG chr4 - 94230402 21086036 21086035 21086080 73144323 73144322 73144367 45 TACAAAGATAAGAATTGTAAAAAAAATTAAAAAAAAAGAAAAAAG ..........::..............xx.........::...... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 37736100 NA +3604 chr4 + 190214555 58832871 58832870 58833068 198 AGGAAAACACAGTATATTTAGGTGTCATGTCTCCTGGTAATTTCTAAAGGCTTCTTCCT-TTCTC-----TCTGTCTCTTTCCCCCCTTCCCCTTCGCCTTCCCCTTCCCCTTCCCCTTCCCCTTTCCCTTCCCCTTCCCCTTCTCCTTCCTTCCTTCCTTTCTTCCTTTCTTCCTTCTCTCCTTCCTTTCTCTTTTCTTTTTT chr4 - 94230402 45185559 45185558 45185751 49044652 49044651 49044844 193 AGGGAAACGCA------TAGGGATTTATGCTTATTGCTCATTTTC-----CCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ...:....:..------.x:..xx.:...::.x:..x.x....::-----.:.......-x....-----....::..x...:::.:..:.::.:xx::...x....:.:::.::.:..xx.::.......:.:.x:::xx.x..:..:x..x.:.x:......xx.:x:.:::xx.....:x...:.........xx.:.... 11M6D28M5D9M1I5M5I134M 111/187 59.4% 193/94230402 0.0% 17/187 9.1% 13647312 NA +4268 chr4 + 190214555 58833000 58832999 58833154 155 TTCCCCTTCTCCTTCCTTCCTTCCTTTCTTCCTTTCTTCCTTCTCTCCTTCCTTTCTCTTTTCTTTTTTCTTTTTCTCTTCC---TCTCTTTCGTTCTTTCTCTTTATTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCTTTCATTTTCTTTCTTCTTT chr4 - 94230402 45185594 45185593 45185750 49044653 49044652 49044809 157 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACT-TGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..:....::....xx::..xx.::.:.x:.:.x.....:...:...:::x::....x.:......:.......xx.......---....x:.::x.x:.....x:..:.-.x.......xx.:x:..:.xx.::...x..::x..:.....xx..... 82M3I24M1D48M 97/154 63.0% 157/94230402 0.0% 4/154 2.6% 13647406 NA +3521 chr4 + 190214555 58833110 58833109 58833192 83 CTTTCTTTCTTTCCTT--CCTTCCTTCTTTCATTTTCTTTCTTCTTTATCTCCTTTCCTTTTCTTTTTCCTTTTGTTTTTCCTTT chr4 - 94230402 20485614 20485613 20485698 73744705 73744704 73744789 85 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTT ...x.....:x:..:.--..:x..::.:::.x...:.::.:....:.x..:.......:..............x.:..x.x.... 16M2I67M 58/83 69.9% 85/94230402 0.0% 2/83 2.4% 38347496 NA +3067 chr4 + 190214555 58876988 58876987 58877123 136 CTATTATATTATATAGAATATATATAATATACTCTATATTATATTGAATATATATAATATACTCTATATTATATTATATAGAATATATATAATATACCCTATATTACATTATATAGAATATATATAATATACCCTA chr4 - 94230402 48211485 48211484 48211620 46018783 46018782 46018918 136 CTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ...x......x...:x.x.:.....x..x.x:.x..........xxx....x...x.....::x:.xxx....::.....x:..x...:x.x:..xxxx.:xxx.:..x...xx..:..xx.:....x..::.:.. 136M 84/136 61.8% 136/94230402 0.0% 0/136 0.0% 10665503 NA +3107 chr4 + 190214555 58878423 58878422 58878494 72 CTGTATATAGTCTATATATTATAT----GCATTCTATATATATTCTATATATTATATGCATTCTATATATATTCTA chr4 - 94230402 69400059 69400058 69400133 24830270 24830269 24830344 75 CTGGATACTATTTAC-TATTATATATCTGTATCCTATTTATATTTTATATATTCTATGCAATGTATAAATATTTTA ...x...:x:.:..:-........----.:..:....x......:........x......x.x....x.....:.. 15M1D8M4I48M 56/71 78.9% 75/94230402 0.0% 5/71 7.0% -10521636 -83708766 +3403 chr4 + 190214555 58958657 58958656 58958737 81 AGACATCCGTAAGTGTATATATATATATATATATATATATAT------ATGTATATATATACACACACACATATATACATATATATA chr4 - 94230402 54293142 54293141 54293228 39937175 39937174 39937261 87 AAAAAACCCCAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA .:.x.x..x:..:..:.:..x...:.......:...:.:...------.....x.xxx:.......x...:..:.:........... 42M6I39M 59/81 72.8% 87/94230402 0.0% 6/81 7.4% 4665515 NA +3875 chr4 + 190214555 58958697 58958696 58958770 74 ATATGTATATATATACACACACACATATATACATATATATACATACATATATATATATACACACACACACACGC chr4 - 94230402 8395788 8395787 8395861 85834542 85834541 85834615 74 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..:...:...:.:.:..:.x...::...x.......:...:.x.....xx...:.:.:...........x..:. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 50562909 NA +3112 chr4 + 190214555 58958699 58958698 58958767 69 ATGTATATATATACACACACACATATATACATATATATACATACATATATATATATACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ....:.:...:.:::..:.x....:...x:.:....:..:::x:.:..xx...:.:............. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 50562911 NA +3077 chr4 + 190214555 58958714 58958713 58958765 52 CACACACATATATACATATATATACATACATATATATATATACACACACACA chr4 - 94230402 45271677 45271676 45271728 48958675 48958674 48958726 52 CACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ...xx..x.x:...:x..........:..........:......x....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 13687037 NA +18496 chr4 + 190214555 58991597 58991596 58992133 537 ATCAGGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGCAATAAAGAAAAAAGAAAAGAAAGAAAGGCAATAAAGAAAAAAAGAAAAGAAAGGAAGGAAAGAAAGAAGGGAGAGTGAGAAAGAAAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAGGTAGGAAGAAAGAAGGAAAGAAAGAAAGAAGGAAAAGGAATGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGCAATAAAGAAAAAAGAAAAGAAAGAAAGGCAATAAAGAAAAAATAAAAGAAAGGAAGGAAAGAAAGAAGGGAGAGTGAGAAAGAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAAAAGGAGGAAGGAAGGAAAGAATGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAT chr4 - 94230402 67066077 67066076 67066708 27163695 27163694 27164326 632 ATCTTAAAAAaaagaaagagagaaagagagaaagagagaaagagagaaagaaag-----aaagaaagaaagaaagaaagaaag-----aaagaaagaaagaaagaaa--gaaagaaagaaagaaagaa-agagagaaagagagaa-agagagagagaaagagagaaagagagaaagagaga-gagagagagagagaaagaaagaaagaaagaaagaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAGATTTTATGAATgaaagaaagaaagaaagaaagaaa------gaaagaaagaaagaaagagagaaagagagaaagagagagagaaagagag-----aaagagagaaagagagagagagag----------------agagagaaagaaagaaagaaagaa---------agaaagaaagaaagaaagaaaga---------aaagaaagaaagaaaagaaagaaagaaagaaagaa---agGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAGTAGAGTAATAGT ...xx:...:..:......::......:.......:.......:..........-----.......:..::............-----.......:.......::..--...:...........:.:.-..x........:....-.:...:......:..::......:x...:..::..-..:...::..:................:.......:.XXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------.x....:.xxx.x...x...:...............:....------...:..............:.......:.......:...:.......:..-----.....:.:..::.:...:...:..----------------.:.:::..:...:...........---------........::.............---------........::.......:.:...:...:.......---...:................:....:xx.:...x.:.:..::...:.x.:....:.:x.:..x..x.:. 54M5D24M5D19M2D19M1D16M1D35M1D42M158I41M6D49M5D24M16D24M9D23M9D35M3D69M 375/469 80.0% 632/94230402 0.0% 221/474 46.6% -8074480 -86155922 +3649 chr4 + 190214555 58991670 58991669 58991856 187 AGAAAGAAAGGCAATAAAGAAAAAAAG--AAAAGAAAGGAAGGAAAGAA---AGAAGGGAGAGTGAGAAAGAAAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAATGAAGGAAGGTAGGAAG-AAAGAAGGAAAGAAAGAAAGAA chr4 - 94230402 65901786 65901785 65901971 28328432 28328431 28328617 186 AGAACTGAGAGCTATATTTAAAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGA-------CAATATAAAATGGAAAAACATTGGAAGCAGAGAACAATAGACAGGGAGAA ....xx:.::..x...xxx....:...--....x.::x........x..---..x...:.:x..:..:......:..:xx.:.:x.:::..:..:::x.....:..x...::xx:...x.x::..:..:.:.x...-------x..x.x::....:.::..x:.x.....-.:....x:.x...x..::.... 27M2I20M3I84M7D27M1I22M 111/180 61.7% 186/94230402 0.0% 13/180 7.2% -6910116 -87320286 +3185 chr4 + 190214555 58991711 58991710 58991836 126 AAAGAAAGAAGGGAGAGTGAGAAAGAAAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAATGAAGGAAGGTAGGAAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .::......::x:x:.:.:xx.:.::.x:......:x............x..x::..:...:...:x.::x..:..:x..:.:::...x.....xxx.x.:..:..:xx.x.x:.:.x..::.... 126M 72/126 57.1% 126/94230402 0.0% 0/126 0.0% 13636299 NA +3601 chr4 + 190214555 58991716 58991715 58991915 200 AAGAAGGGAGAGTGAGAAAGAAAGAAGAAAGAAAGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAATGAAGGAAGGTAGGAAGAAAGAAGGAAA--GAAAGAAAGAAGGAAAAGGAATGA---------AGGAAAGAAAGAAAG---AAAGAAAGAAAGAAAG-------AAAGAAAGAAAGAAA chr4 - 94230402 72111985 72111984 72112205 22118198 22118197 22118418 221 AAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGTGAGTCCAGGAAGGGAATGGAAGTACTGCCAAACAAAGAGTGAGa ...........:.:.:.....:.:::x.x.:..x:.x..x:x.x.:x.::..:.::::.:..:x:.xx..:x...:.:x.::.:.x:..::..:.:....xx....:...::x.:..:.x.xx.....x.--::......x.xx:x...::.....---------:........x.x:..---.:::.::...x.:...-------...x.....:x..:. 130M2I24M9I15M3I16M7I15M 118/200 59.0% 221/94230402 0.0% 21/200 10.5% -13120269 -81110133 +3082 chr4 + 190214555 58991749 58991748 58991868 120 AGAGAAGGAAGGAAAGAATGAAGGAAGGAAGAAAGAAGGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAATGAAGGAAGGTAGGAAGAAAGAAGGAAAGAAAGAAAG-----AAGGAAAAGGAATG chr4 - 94230402 76139340 76139339 76139464 18090939 18090938 18091063 125 AGGGCTGAAAATCAATAGTGAAAGATGTAAAAATGAAAGACAGTGAAAGAGAAAACTGAAAAATAGAATTAGTCGGGGATAGATAAGAAAAGTGAATGAAAGAGAGTATCAGAGGAGATGGAATG ..:.xx.:..:xx..x.:....:..x.x..:..x...:..x..x:.:.:.....:xx.:...:x..:.x.::xx.::.:...:x.::..:.:x...x......:..-----:....:.x...... 106M5I14M 73/120 60.8% 125/94230402 0.0% 5/120 4.2% -17147591 -77082811 +3257 chr4 + 190214555 58991965 58991964 58992067 103 AGAAAGGAAGGAAAGAAAGAAGGGAGAGTGAGAAAGAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAAAAGGAGGAAGGAAGGAAAGAATGAAGG chr4 - 94230402 10903375 10903374 10903475 83326928 83326927 83327028 101 AGAAAGGA-GAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATG-GTGAATAAAGGAATGTGGG ........-.:..::.....x:.:.:.:..x:.:.:x...:xx...x...............:::.xx..::...x..:..x.-:x...x:..:.....x:.. 8M1D74M1D19M 67/101 66.3% 101/94230402 0.0% 2/101 2.0% 48088590 NA +3699 chr4 + 190214555 58992009 58992008 58992130 122 AAAGAAAGAGAAAGAAAGAAAGAAAGGGAGAAAAGGA--GGAAGGAAGGAAAGAATGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----AGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACA------AAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...:..:..........::.:......:..:..--.x:.::...x....:x.x...:x.------...:xx....x.:.::..x:.:....:.....:.:..-----::..:..:..:..x.... 37M2I24M6D37M5I18M 79/116 68.1% 123/94230402 0.0% 13/116 11.2% 28458845 NA +3041 chr4 + 190214555 59014721 59014720 59014767 47 ATTTTTCCTCATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67274507 67274506 67274553 26955850 26955849 26955896 47 ATTTTGTCACTTAAATATGTATATATAGAGAGAAGGAGAGAGAGAGA .....x:.x.x..x....:..............::............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -8259786 -85970616 +3501 chr4 + 190214555 59014739 59014738 59014802 64 ATATATATAGAGAGAGAGAGAGAGAGAGACAGAGGGAGCACTTATTGCTAGAAATTTTTCTCTT chr4 - 94230402 68616316 68616315 68616379 25614024 25614023 25614087 64 ATATATATATATAGAGAGAGAGAGATGAAAAAAGGAAACCTTTATTGGTGGAAATTTTTCATTT .........x.x.............x::.x.:...:.:.x:......x.:..........x:.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% -9601577 -84628825 +3198 chr4 + 190214555 59016833 59016832 59016917 85 CCTTTTTTCTTTCCTTTTCTTTACTTTCTTTTTTTTTTTTTTTTTATCCTTGACCTTTAGGAGTTTAATTATTAAAGGTCTTAAG chr4 - 94230402 40700180 40700179 40700262 53530141 53530140 53530223 83 CTTTTCTCTTTTTCCATTCACCAATTTCCTTTTTTCTTTTTTTTCATTCCAAAATTTGGGGAGTTTTATTCT--AGGGTTTTGAG .:...:.::...:.:x...x::.x....:......:........:..:.:x:.x:..x:.......x...x.--.:...:..:.. 72M2D11M 56/83 67.5% 83/94230402 0.0% 2/83 2.4% 18316653 NA +3063 chr4 + 190214555 59030474 59030473 59030535 62 TGTGTGTATGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATGTA chr4 - 94230402 39267149 39267148 39267210 54963193 54963192 54963254 62 TGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ..........x::.:::...xx.:.........:....x.....::.x.....:x....::. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 19763325 NA +3293 chr4 + 190214555 59030482 59030481 59030539 58 TGTATGTGTGTGTATATGTGTGTGTGTATATGTGTGTGTGTGTATATATATGTACATA chr4 - 94230402 48089497 48089496 48089553 46140850 46140849 46140906 57 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-TACACA ....x..x...:....:::..........:..x.x................-....:. 51M1D6M 47/57 82.5% 57/94230402 0.0% 1/57 1.8% 10940985 NA +3604 chr4 + 190214555 59065962 59065961 59066062 101 TGGTATAATGTTAGCACACTGCAGCCATGATTTCCCAGGCTCAATGGATCCTCTCACCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGTGCACCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ...:..x.....------..:.....xx:.x:.:.::..:....xx.x.:.x.xx:x........::..................--:.........::.. 12M6D67M2D14M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 40868848 NA +3178 chr4 + 190214555 59077042 59077041 59077132 91 GTGACAGAGCCAGACTCTGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAATACATAG chr4 - 94230402 91846532 91846531 91846622 2383781 2383780 2383871 91 GTAACAGGGCCACTCAGCGTGCCCCACAAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGTCAAGTAAACTAAATGG ..:....:....xx.xx:..x:..x.x..:::...::..............x....:..:...:..x..::x.:xx..:x...x..x..:. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% -32769490 -61460912 +3037 chr4 + 190214555 59077055 59077054 59077147 93 ACTCTGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAATACAT--AGCAAAGTGATTTATTT chr4 - 94230402 34672382 34672381 34672473 59557930 59557929 59558021 92 ATTGTATCTCCTGTAACAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAAATGA---GAAACACATCAAACACAGTTACTGAATT .:.x.:.....x:x..x.....:......x::....:..........::..::.:.:....x:.---:...:....--.:..x...x.:.x.x.. 64M3D9M2I17M 62/90 68.9% 92/94230402 0.0% 5/90 5.6% 24404673 NA +3076 chr4 + 190214555 59077059 59077058 59077240 182 TGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAATACATAGCAAAGTGATTTATTTAAAATGAACTATACCATCAATAACTTAAATGATCTAGACATCTCAATTAAAAG---AAGGTATTATCA---TATTTGATAAAAAAAAAAAGTGACACCA chr4 - 94230402 44177684 44177683 44177845 50052558 50052557 50052719 162 TATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGATGATCAACAGCA-------CTGTTTGAAAGGTAC-----------------AAATG--CTTGATATCTAAAGAAATAGTTTAATGTATTATAAAGGCTTTCACTGCAAATAATGAGTGATATTA .:.:.....xxx...............:....:.:.x.....x:x:.:..:.:..:..::.x..x:..xx.:....-------:.:...:...x.x..-----------------.....--..x..:....x..xx..x..---..x.......x.---:x..::x.:x...x..x:.....:.::. 76M7D15M17D5M2D20M3I12M3I28M 105/156 67.3% 162/94230402 0.0% 32/156 20.5% 14899375 NA +3253 chr4 + 190214555 59085411 59085410 59085474 64 TTCTCTCTTTCTTTCTCTCTCTTTCTCTCTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTC chr4 - 94230402 9693768 9693767 9693831 84536572 84536571 84536635 64 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTC ....::..:..::.:..:..:...:::..x...:..x.:...x..x...:........:..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 49391643 NA +16454 chr4 + 190214555 59086357 59086356 59086785 429 TTCAAGTTCAGGTATTAATTCTAAAAGTCAAAATTGTACTGCACTTTAATATTCTTGTGTAACAAAACTACGAACTATCTGAAATAGTCGA----TATTACAAGAGAGTCTTATAAAGGACATGCCAGCCAATTTTTGACATATATAATGTTAGGGACCT-TAGTACAACCATGTCTCAGCAGTAGCTGAAAGGTTAATGGAATTGGGATTTGTGCAGACATGACTGATTTTCCTCCTGCGGAAAGAGAAGGATGGAGGAAAGAAGCTGATTTGGATAAAGACCTTTAA-TGTCATTCACATTTACATC-TTCCTTTTTAAGGGAAGCACAGCACATGTCTCTTTGACAGCAAATCACTGTAATCTCTTAGAGGCATCCAAAGCTTATCAAAGAAAACATTGTTCAACCAAGAATAAGCTAAGAGACAAGATTAAA chr4 - 94230402 45417326 45417325 45417745 48812658 48812657 48813077 420 TTTGAGCCTGGGAATTAATTTTGAAATGGTAAATTAATCTTCAGTTTAATATTCCCAGTCATCTGACCTGCAAACTAACCAGAATAATCAAGATATACAGCAAGAGAGACTT-TAAAGGATATGTCAGCTGTTTCTTGACATATG--GTGCGAGAGACTTACTGTACAAGAATGTC--AGCAGTACTTGAAAGGTTAATGGAAGTGGGATTTGCAGAGACATGACTGATTCGCCT---------AGAACAGGAAGG--GAAAAAAGCTGATTTGGGCAAAGACCTTTAAAGGCCTTTTGCGTTTGCATCCTTCCATCTGAAGGGAAGAAAAGCACTAGTCTCTTTTAACTTAGATCACTCTAATCTCTTGAAGGGATCCAAAACTTGTCAAAGAAAACATTTTCAAACTAGGAATGAGCCATCAGAGTGGGTGAAA ..::..::::..x.......:.:...xxxx.....:xx..x..x..........:::xx:.x.x:.x..:.:.....x.:::....:..:.----..:x:........x...-.......:...:....::x..:.........:--:..:x..:...:.-:x......xx.....--.......x:................x.........::x..............:x...---------...:x....x..--....:............::............-x.:.x..::.:...:....-....x.:.x........x.x.....xx........x.xxx:.:......x.........::...x.......:...:..............x.:x...:.:....:...:.xx...xx:.:.x... 91M4I17M1D32M2D13M1I15M2D57M9D12M2D31M1I19M1I126M 303/413 73.4% 420/94230402 0.0% 23/413 5.6% 13669031 NA +3391 chr4 + 190214555 59088845 59088844 59088934 90 CCTCCTCTCCTTCCTCCTCCTTCTCCTCCTCCTCCTCCTCGTCTCCTTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCTCCTCCTC chr4 - 94230402 6793829 6793828 6793914 87436489 87436488 87436574 86 CCTCCGCTC--TGCTGCTCCTTCT--TCCTTCTCATCATCCTCACCGGCCTGCCCGTGCTCTCCCTCCTCCCCCCCCACCCCTCTAGCTC .....x...--.x..x........--....:...x..x..x..x..xx...x.:.x.x...:.........:..:..x......:xx... 9M2D13M2D64M 65/86 75.6% 86/94230402 0.0% 4/86 4.7% 52295016 NA +3333 chr4 + 190214555 59088875 59088874 59088972 98 CCTCCTCCTCGTCTCCTTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCTCCTCCTCCTTCCCCTCCTCTTCCTCCTCCTCCCCCCCTCCTCCTT chr4 - 94230402 77208612 77208611 77208708 17021695 17021694 17021791 97 CTTCCTCACTGCCTC-TTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTTTGCATTTAGAATCTCCCCCCATCCTGCTT .:.....x::.:...-...:x.:...:..:..:..:.......x.x:xxx.:....:.:.........::x.x.::xxxx:........x....x... 15M1D82M 63/97 64.9% 97/94230402 0.0% 1/97 1.0% -18119737 -76110665 +3135 chr4 + 190214555 59088878 59088877 59088975 98 CCTCCTCGTCTCCTTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCTCCTCCTCCTTCCCCTCCTCTTCCTCCTCC---TCCCCCCCTCCTCCTTCTT chr4 - 94230402 77208612 77208611 77208708 17021695 17021694 17021791 97 CTTCCTCA----CTGCCTCTTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTTTGCATTTAGAATCTCCCCCCATCCTGCTT .:.....:----..x....:..:x.:......:.....:.......x:x.xxx.:..........:.:.:.::x.x.::---x:.:....:.x....x... 8M4D67M3I19M 63/94 67.0% 97/94230402 0.0% 7/94 7.4% -18119734 -76110668 +3134 chr4 + 190214555 59088924 59088923 59088988 65 CCCTCCTCCTCCTTCCCCTCCTCTTCCTCCTCCTCCCCCCCTCCTCCTTCTTCTTTTTCTATCTT chr4 - 94230402 70202202 70202201 70202266 24028137 24028136 24028201 65 CTCTGCTTCTTCTCTCTTCTCTCTTCTCCCCCCTCCCCCCCTTCCCAATTTTCCTTTTCTCACTT .:..x..:..:..::.::::......::..:...........:.:.xx.:...:......xx... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% -11113278 -83117124 +3029 chr4 + 190214555 59088945 59088944 59088992 48 TCTTCCTCCTCCTCCCCCCCTCCTCCTTCTTCTTTTTCTATCTTCCTC chr4 - 94230402 83554933 83554932 83554980 10675423 10675422 10675470 48 TCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTC .....::..:...x..:...:..........:::.....x.....:.. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% -24465988 -69764414 +3075 chr4 + 190214555 59094471 59094470 59094546 76 TTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGTTTTGT--TTTAAATAGA chr4 - 94230402 2453082 2453081 2453159 91777244 91777243 91777321 78 TTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTTTGCAGTTTCACTAGA ..::.x..:....:..:..:.:...:..x::.::.::..x:......:...x...:.........:--...x.x.... 66M2I10M 52/76 68.4% 78/94230402 0.0% 2/76 2.6% 56641389 NA +3026 chr4 + 190214555 59094474 59094473 59094535 62 TTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGTTTTG chr4 - 94230402 51995588 51995587 51995649 42234754 42234753 42234815 62 TTCTTATTAATCTTGCTTCACTTTTTTTTTATTTTTCTTTTTTCTTTAATTACTTTGCTTTG ..:..x..xx....x...:x:..:......x.....:......:...xx..:.....:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 7098886 NA +3577 chr4 + 190214555 59162267 59162266 59162455 189 AGATACTATACAAGATCACCATCCCCAAGGCACAT---AGTAATCAGATTCAGCA------AGGTCAATTTGAAAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAA chr4 - 94230402 18943090 18943089 18943281 75287122 75287121 75287313 192 AGATGCTA---AAGGGTAACATTGCTAAATCACACTAGGGTAAGCAAAATAAGCACAACTTATGTGAGGTTTAGGAAAAAGGAGGAATTAAAGAAAAATGAAAATACAGTGAGGTGAAGTAAG---GAGACGAAAAAGGCAAAATAGAATAAGCACATTAAAATGAGAGGACTGAGAGCAAAGGAAAGGGAAGAAAAA ....:...---...:x:.x...:x.:..:x....:---:....x..:.x.x....------.x..x.:x..x.::...:.::..:..xx........:x:..:.x.x.:x..::x:...x...---..:.x:..:..:.x..:.x....x:.:x.x.xx..:.x::....:xx.::..x...:.....::........ 8M3D24M3I17M6I62M3D72M 113/183 61.7% 192/94230402 0.0% 15/183 8.2% 40219177 NA +3350 chr4 + 190214555 59162329 59162328 59162436 108 GAAAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGA-AAGAAAGGAGGGAAGGAAGG chr4 - 94230402 30533174 30533173 30533286 63697117 63697116 63697229 113 GAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:..........::.:.:.....::xx:x....:.:x:..:.----.:.x.....xx....x.:.::..x:.:....:.....::...x.-x:........:.:.:x..:. 44M4I44M1I20M 70/108 64.8% 113/94230402 0.0% 5/108 4.6% 28629155 NA +3278 chr4 + 190214555 59162343 59162342 59162460 118 AAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAA chr4 - 94230402 61334684 61334683 61334801 32895602 32895601 32895719 118 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ...:...x.x:x...xx......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x.:.:..x:x..:...x..x:.:...:..x:::......:.:..:. 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% -2172341 -92058061 +4256 chr4 + 190214555 59162348 59162347 59162503 156 AAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAGAAAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGG-----AAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGA chr4 - 94230402 44053989 44053988 44054137 50176266 50176265 50176414 149 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAA----------------AATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA .....x:..::.........::...:.::x......:x::.:.:.x::.----:...............x.:.----------------..x...x.x......x.....:..x..x.x...:.-----::.:....:...:..:..:....:x..:.x::..:. 49M4I20M16D35M5I36M 95/140 67.9% 149/94230402 0.0% 25/140 17.9% 15108359 NA +3164 chr4 + 190214555 59162367 59162366 59162446 80 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG--AAAGAAAGAAAGGAGGGAAGGA-AGGAAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x..--....::....:.::.:x.:...-.:.........:. 45M2I22M1I13M 58/80 72.5% 83/94230402 0.0% 3/80 3.8% 22304073 NA +3672 chr4 + 190214555 59162402 59162401 59162533 132 AAGAAAGAAGAAAGAAAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGGGGAG--------AGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAG--AATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ..:x..:...:..........:.....:..--------.......xx:x:......x..:.:xxx:.:.......xx.:..x::...--..x:.:.:...:..::...:.x.xx:::.....:..:..x... 30M8D49M2D43M 80/122 65.6% 122/94230402 0.0% 10/122 8.2% 28629238 NA +3779 chr4 + 190214555 59162417 59162416 59162593 177 AAGAAAGGAGGGAAGGAAGGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAA-----GAAAAGAAAGGAAAAAAGGAAAG----GAAACAAAGAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAG-------------AAGGAGACAAGAAAATG------------GGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ...::.x:x.x....:.x...::...........-------------.....:....::...x.------------.::...x::.xxxx...............:x..:..x...x.x:.::..x.:.:.:.:x..x.x...-----.x::.x.......:......:..----..:...:.:.. 34M13D17M12D67M5I23M4I11M 103/152 67.8% 161/94230402 0.0% 34/152 22.4% 15108440 NA +3544 chr4 + 190214555 59162435 59162434 59162574 140 GGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAG--GAAAGAAAGGAAGAAAGAAA--GAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAA chr4 - 94230402 89963534 89963533 89963673 4266730 4266729 4266869 140 GAAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAG---GCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAA-AGAGAAAACAAAAAATCGAAGAGGAAAA .:...:..:.......x....xxxx..x.x::......:xx.:.:.....---...:......--.......x::...x.::..:--...x:.x:..::.x.:xx.x.:......-.:......x....:.xx::.:....... 50M3D10M2I20M2I28M1D28M 91/136 66.9% 140/94230402 0.0% 8/136 5.9% -30801099 -63429303 +4055 chr4 + 190214555 59162435 59162434 59162570 136 GGAAAAGAAAGAAAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAA------AGAAAGAAAAAGAGAA---AGAAAGAAAGAAAAGAAAAGAAAAGAAAGG chr4 - 94230402 72821453 72821452 72821596 21408807 21408806 21408950 144 GGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGG-GGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAG ..:....:x.::..::...:x...xxx.x.:x...:.x...::-..........x........:.x..xxx.x.:.:.:..::.::....------x............x..---........xx.:x.:...:.....x...:. 43M1D46M6I16M3I30M 92/135 68.1% 144/94230402 0.0% 10/135 7.4% -13659018 -80571384 +3951 chr4 + 190214555 59162447 59162446 59162611 165 AAAGAAAAAAGAAAGGAAAGGAAACAAAGAAAGGAAAGAAAGC--AAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAGGAAAGGAAACAAAGAAAGAA-----AAGAAAGGAAAGAA chr4 - 94230402 21758891 21758890 21759061 72471342 72471341 72471512 171 AAAGGAGTCAGAAAGGGAGGGAG-CAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ....:.:xx.......:.:...:-...:.:...::.:.::.x:--..x..x.:.x.x.x..:x...x.x:...:x.x.x..x:.x:....::x.x.:xx......:..............:::.....:.x.::x...:..x.x.::.:.:..-----....:.::...x.. 23M1D19M2I108M5I14M 102/164 62.2% 171/94230402 0.0% 8/164 4.9% 37403556 NA +4031 chr4 + 190214555 59162472 59162471 59162595 124 AAAGAAAGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAA----GGAAAGGAAACAAAGAAAG chr4 - 94230402 30533165 30533164 30533286 63697117 63697116 63697238 122 AATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTA------AAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..x:...:.:.......x.....::...:......:xx.x:.:....x.------..:.xxx....x.....xx....x.:.....x::::..:...:..:....----........:.x:..x.... 49M6D50M4I19M 82/118 69.5% 122/94230402 0.0% 10/118 8.5% 28629307 NA +3346 chr4 + 190214555 59162478 59162477 59162588 111 AGGAAAGAAAGCAAAGAAAGGAAAGAAAGGAA---GAAAG-------AAAGAAGGAAAGAAAGAAAAAGAGA-----AAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAGGAAAGGAAACA chr4 - 94230402 9412073 9412072 9412198 84818205 84818204 84818330 126 AGAAAAACAGGCAAGAAATACAAGGTAATTAATTTGCAAGCCTTTTTAAAGGAGCTGGAAAAAAAAAAAAAACCCACAAGGAAGAGGGAACAGAATAGAAGAGGAAGGACAAAAGGAGAGTAAGCA ..:...:x.:....::..x:x..:.x..xx..---.x...-------....:..xx:::...:.....:.:.-----...:....::...x....x....:..:.....x.......:..x..:.. 32M3I5M7I25M5I49M 77/111 69.4% 126/94230402 0.0% 15/111 13.5% 49750405 NA +3315 chr4 + 190214555 59162499 59162498 59162568 70 AAAGAAAGGAAGAAAGAAAGAAGGAAAG--AAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x..:x....::..x:.x:..:..--::..x.:...:.:..:..............x........... 28M2I42M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% 34095514 NA +3357 chr4 + 190214555 59162518 59162517 59162624 107 GAAGGAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAGGAAAGGAAACAAAGAAAGAAAAGAAAGGAAAGAAGGCAAGAAAGAAA chr4 - 94230402 48787367 48787366 48787472 45442931 45442930 45443036 106 GGAAGATAGGAAAAAGAAGAGAAAGGAATACAGAACTTTTTAAAAAGGAATTCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAA-GAAAGAACTCACTGAAGAAA .:.:..x..:..:..:.........:..x.x....xxxxxx.:...:...xxx...:.x.x...::...x...:....x..x....-.......xx..xx:...... 86M1D20M 72/106 67.9% 106/94230402 0.0% 1/106 0.9% 10375151 NA +3521 chr4 + 190214555 59166046 59166045 59166099 54 TCTGTTTCAAAAAACAAAACAAAACAAAACAAACAAACAAACAAAAAAAACAGA chr4 - 94230402 68654336 68654335 68654389 25576014 25576013 25576067 54 TCTGTTTAAAAAAGAAAAACAAAACAAAACCAACCAACAAACAAACAAACCAAA .......x.....:x...............x...x..........x...x..:. 54M 46/54 85.2% 54/94230402 0.0% 0/54 0.0% -9488290 -84742112 +3122 chr4 + 190214555 59166059 59166058 59166107 49 ACAAAACAAAACAAAACAAACAAACAAACAAAAAAAACAGATGGATTTA chr4 - 94230402 70657707 70657706 70657755 23572648 23572647 23572696 49 ACAAAAAAAAACAAAACAAACAAACAAACAAAAACAGAAGGTTAAATTA ......x...........................x.:x..:.x:.x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -11491648 -82738754 +3489 chr4 + 190214555 59166061 59166060 59166174 114 AAAACAAAACAAAACAAACAAACAAACAAAAAAAACAGATGGATTTAAAGACTTAATTATA-GGACGTCAAACTATAAAAATCCTAGAAGAAAACCAAGGAAATAGCTTTCCTGA chr4 - 94230402 38540321 38540320 38540424 55689979 55689978 55690082 104 AAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAA-------TCAAGGAAGAAATTATCTGGATCTCA----GTAAAACTTACTGGAACATATTAGAGAGAAAATTTTCCTGA .....................:.............x.-------.:..:..xxx......x-...:x...----:.....x.:x:x.:.:x.x.::.::..:.x.::........ 37M7D17M1I8M4D41M 75/103 72.8% 104/94230402 0.0% 12/103 11.7% 20625740 NA +3418 chr4 + 190214555 59166061 59166060 59166106 46 AAAACAAAACAAAACAAACAAACAAACAAAAAAAACAGATGGATTT chr4 - 94230402 81661610 81661609 81661655 12568748 12568747 12568793 46 AAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTT ....x..................................x.xx... 46M 42/46 91.3% 46/94230402 0.0% 0/46 0.0% -22495549 -71734853 +3001 chr4 + 190214555 59177559 59177558 59177603 45 TTTTTACTTAGTTTTATTTTATTTTACTTTTTTTGTAATTTTATT chr4 - 94230402 28951577 28951576 28951621 65278782 65278781 65278826 45 TTATTACTTAATGTTACTCTATTTTAATTTTTTTGTAATTCTATT ..x.......:.x...:.:.......x.............:.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 30225982 NA +3149 chr4 + 190214555 59188859 59188858 59188941 83 TTTGTTTCCCTTCCTTTCTACCTCTCTCT----TTGCTTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTTCTTTCCTTTTT chr4 - 94230402 18988810 18988809 18988896 75241507 75241506 75241593 87 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..::..x:..:.:x.x.:.xx..:.....----:.::.............:............x...x.xx..::.x......x.:. 29M4I54M 58/83 69.9% 87/94230402 0.0% 4/83 4.8% 40200049 NA +3820 chr4 + 190214555 59188873 59188872 59189029 157 TTTCTACCTCTCTCTTTGCTTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTCTTTCTCTGT-CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45185586 45185585 45185743 49044660 49044659 49044817 158 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x..xx:.:..:..:.x.:.xx.:::xx:.....x:...x...............:x:...:.x::..::...:..::..xx::::..:......:x..:x..-.....:x..x::.x.......xx.:x:.::.xx.:::..x..::.....:.:. 104M1I53M 91/157 58.0% 158/94230402 0.0% 1/157 0.6% 14003287 NA +3267 chr4 + 190214555 59188892 59188891 59188977 86 TTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTTCTTTCCTTTTTCTTTCCTTTCTTTCTCTCTCTCTTTC----TTTCTCTGTC chr4 - 94230402 83048904 83048903 83048993 11181410 11181409 11181499 90 TTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTCAGCGCTTCTCCATC ............x......::.......:.:.x.x...:.:x:.::.x.:.x.x.x.::..:....:x..:.:...----:.....::.. 76M4I10M 58/86 67.4% 90/94230402 0.0% 4/86 4.7% -23860012 -70370390 +3352 chr4 + 190214555 59189013 59189012 59189086 74 TTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTTCTTCTT chr4 - 94230402 7499881 7499880 7499954 86730449 86730448 86730522 74 TTTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTCGTCTT ....:.x....:.:..:..:x..:..:..:.:.::x...x:.::.xx...x.:................x.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 51689132 NA +3103 chr4 + 190214555 59189023 59189022 59189082 60 TCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCCTTCTTCCTTTTTTTTCTTTCT chr4 - 94230402 31754630 31754629 31754689 62475714 62475713 62475773 60 TTTCCCCACCCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTTT .:.::.:x:.:....x.....:.........:..x....::.::.:.........:..:. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 27434393 NA +3362 chr4 + 190214555 59202407 59202406 59202502 96 ACTCCTTTGCAACTCCTTCCTCCTCTCCTTTTTCATCTTCTTCTTTTTCTTTCTCTTTCTATTTTTCTTCTTCTCCCTCTCCCTCTCTCTTTTCCT chr4 - 94230402 84866936 84866935 84867031 9363372 9363371 9363467 96 ATTCCTTCCAATTTCATTGTGTCTTCCCCTTATTATCTTTTACTTTTTTTCTCTCCTGTTATTTAGCTTCCTTTCCATTTCACAGGCTCCTTTCCT .:.....:xx.x:..x..x:x:..::..:..x.:.....:.x......:.:....:.x:.....xx....:.:...x.:..x.xxx...:...... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% -25664529 -68565873 +3018 chr4 + 190214555 59204498 59204497 59204546 49 TCCCCTCCTCTCCTCTCTTTCTTTCTCTTCTTTTCACTTCTCTTTTTTT chr4 - 94230402 91992966 91992965 91993014 2237389 2237388 2237437 49 TTTCCCCCCCCCCCCCCTTTTTTTTTCTTTTTTTCAGTTCTCCTTTTTT .::..:..:.:..:.:....:...:....:......x.....:...... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% -32788468 -61441934 +3220 chr4 + 190214555 59244831 59244830 59244884 54 GCAAAAACAAAAAAAAAAAAACAAAAATAAAACAACAGCAACAACAACAAAAAA chr4 - 94230402 8722672 8722671 8722725 85507678 85507677 85507731 54 GCAGAACCTAAAAAAGAAGAGAAGAAATTAACCAACAACAACAACAACAAAAAA ...:..x.x......:..:.:x.:....x..x.....:................ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 50522159 NA +3119 chr4 + 190214555 59244834 59244833 59244889 56 AAAACAAAAAAAAAAAAACAAAAATAAAACAACAGCAACAACAACAAAAAAACCTT chr4 - 94230402 44544173 44544172 44544228 49686175 49686174 49686230 56 AGAACAAACAGGGAAGAAAAAAACTAAAACAACAACAACAACTGTGAAAAAGCCTT .:......x.:::..:..x....x..........:.......x:::.....:.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 14700661 NA +3053 chr4 + 190214555 59244835 59244834 59244884 50 AAACAAAAAAAAAAAAACAAAAATAAAACAACAGCAACAACAACAAAAAA chr4 - 94230402 58324937 58324936 58324986 35905417 35905416 35905466 50 AAAGAAAAAAAAAAAAACAAATGAGAAACAACAACAACAAAAGCATAAAA ...x.................x:x:........:......x.:..x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 919898 NA +6258 chr4 + 190214555 59270622 59270621 59270890 269 TATATTACTTAATTATGTCAATTTTTCACATTCCAGGGATTTGCTGAATATTACTTCAATTAATGA--CTGCAGATACCCTTACATGGAAATATAAGGCAGTTATCGCCAAATAAAGTGCTGTATTGTGTGTACGTTAAAGAATGGGTATGCTTTAGAATATTTGA--ACAGTTTATTTTTT-ATTTATGAAGGTCAC-TAGTGAATATAATCGATCGAAATGTGACTTGTTTTCAATAAGGGTCTTGATTGAGCAATCAATAGACAAGTGCATT chr4 - 94230402 45366015 45366014 45366270 48864133 48864132 48864388 256 TGCATTACTGTCTTTTTTTTTTTTTTTATGGCCAAGGCATCTGCTAAATCTGCATTCATTACATGGAGTTGCTGAAGCATTGACACAGGACTG--AAGCAGTAACTGCTGAGTG----------------GTATTTTAAAGTGTGAATATGCTTTGACACATTTCACTACAGTTAGTTCTTTGACTTATAAAGGTCAAATAGTGACTGCA-TAGATCAAAATTTGATTTGTTTTCAATAAGGGTCTAACTTAGTCAATCAATAGGCTACCACGTT .::......xxx..x.x.:xx.....:.::x:.x...x..:....:...x.xxx....x.xx...:--:...x..x:.x:.x...::.:.x.:--.:.....x.::..::.:.:----------------...:x......x:..::........::x.:....x.--......x:..:...-.:....:.......x-......x.::.-.x....:....x...:...................x:x..::x..........:.x.x::.:.. 66M2I25M2D19M16D36M2I14M1I15M1I11M1D64M 167/250 66.8% 256/94230402 0.0% 25/250 10.0% 13904607 NA +5235 chr4 + 190214555 59286723 59286722 59286909 187 TAATCCTTTAAATCAAAAACTTATTTTTGAATTTTTAATAAAGCTAAAATAAATTGATACATTATTTGATGTGATGTTATTTAGCTTTCTTTCTTTTTTTTAAAACTTGCATTTCAATCAGTTGCTTAAAAGGTCATGTTTAATGTCACATTAGCACTTTTGCAGAAAGATTTATTTTTGCTTAGGC chr4 - 94230402 45368284 45368283 45368468 48861935 48861934 48862119 185 TAGTATTCTGAACAAAGCAGAGATTTTT--ACTCTGAATAAGACTGGTATTAGTAGATGTAGTATTGTATATGTTTTGTTTCTGTTCTTGCGTTTGTTTTAAAGATTCTGTTTTCAATCAGCGCCTTAAAAGATCATGTTTAATGTTGCGTCAAAACTCTTTCACAGACATTAATTTTTGTTCTGGC ..:.x:.:.:..:x..:x.xxx......--.:.:.x.....::..::x..x.:.x...::.x....xx..:..x.x.xx..:x.:.:.:x:x:..x....x..:.:.:xxx..........:xx........:.............::.:.:.:x...:..x..x.:.x...x.......:.:x... 28M2D157M 116/185 62.7% 185/94230402 0.0% 2/185 1.1% 13918439 NA +10682 chr4 + 190214555 59308912 59308911 59309445 534 TTCCCTATTGAGATGATAATAAATGTTTGA-ATTGCTCACCTAGAAAGATTTTCTTTGAGGAGAAAGTGCTGGGGTCATTTAAAAAGTCACTTGATACTATGCTAGAGAGAGAATAGCTTTTCTCTTG-GGTTGGCTATCAATAGATGAAATAGCTTTTTTTCTCTTTCCTTGCCTCATCCACACCCCCGTTTCCCATGCCCTTTATAATGTTCGACAAAAGCATTGCTCAACTGTATCTTGTCTGACAGTGAAGGTACATAAAACACCCATTTTGTTTAAATGAATGGCAGTCACCTTTTTGCTATACTAACTACTACTGCACCACAGGAAA--CAGCATGGGCTCCGC---TTGTATCTCCTCTCTTTCAGCTCATGGTGTCTTACAGGTGATATAAATCACAATCCCCT--TTAATCTGATAATCGTTCAACATTAAGTCTCTGT--------GCTGCAT--TCGAGTAAGTTCTTGTACTTGTTTGAGACACCTAATGTTTTTAAAGTTGTGTACTCCCTAGCATTGATAAA---CAACACGTTTTCTTAAA chr4 - 94230402 45371543 45371542 45372053 48858350 48858349 48858860 511 TTTTCAATTAAAA-GGTAATAAAAGTTTGGGATTGTCTGCATGACAGGA----CTTTTAGGTCAGAATACCAAGTTTATTCTGAAAACAAACTCATACT--------GAGAGAATGAAATATTTCAAGTGGTTGCCTAGTT-TGCACCGAATAGC---------CCTCCCTTTTCCTAT----------ATTTCTCATGCCTTTTATCATGCTCAACAAAAGCGCTGTTCAGCTGCATCTTGCCCGACAGTTAAGATATATAAAATGCCCATTTTTTTCAAATGAATGACAGTAACCTTTATTCTGAACAAATAGCTAGTCCAGCAGGGCAAATGCAGCACTGTCTCTGCAGTTCCTCTGTGCTCACTTTTCATCCATTATGCCTAA------ATAACAGTCATATTTCCCTCCTTTCCCTTTTGCCAGCTCTAGTTCCAGTCTCTGTAAGTGATCACTGTATGGTTCATTAAGTTCTTGTACGTAT------AAACTGATGTTTTGGGAGTTGGCCAGATCCCACCAATCATAGATCTCAACATGTTTCCTCAAA ..::.x...:.:.-.:.......x.....:-....::::.x.::x.:..----....x...xx.:.:.:.:::.x.:...:x:...::x.x:.x.....--------........::xx.x.:..xx.-.....x...x:x-.:x.:x:......---------.:.:....x:.::..----------:....:......:.....x...:..:........::..:...:...:......:.:......x...:..:......::........x..:.........:....x......x.x..:x..x..:x:...x.x..x..x:.x...--.....:x.x...:..---.:x.x.x.x...x....:x:::...x:..:..x.------...xx.:...:.x.:....--..xx:..xx.:x:x.:..x.xx.:x.........--------:...:..--.:x.x.............x.:.------x.x..:.......x::.....xx:.xx:..:.x..x.x...:.---.....:....:..:... 13M1D16M1I18M4D46M8D21M1I12M1D13M9D15M10D144M2I15M3I34M6D19M2I34M8I7M2I22M6D43M3I17M 326/489 66.7% 511/94230402 0.0% 67/489 13.7% 13937369 NA +3010 chr4 + 190214555 59325683 59325682 59325725 43 AAATGCTCATTCACTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 82617151 82617150 82617193 11613210 11613209 11613252 43 AAATGTTTGCTGACTTTCTCTCTCTCTTTTTTTTTTTTTTTTT .....:.:::.x.......:...:................... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -23291468 -70938934 +3475 chr4 + 190214555 59369427 59369426 59369524 98 TGAGTAAGGGAATTGGATTCATTTTCTGGTGGGGTGATTGTGGGTTTTGATATGTTTTAGTTTGTTGGAAGTTCTTGGA----AAGTAGGATTTTCAGTAAG chr4 - 94230402 3688556 3688555 3688655 90541748 90541747 90541847 100 TGAGTAAAATAGTTGGATTTGTTTTGTGGTTGAGTGGTTGTGGGTTTTGTTTTGTTTC--TTTTTCACCAGTTTTCTGACTGGGAATGGACATTACAGTAAG .......::x.:.......::....x....x.:...:............x.x.....:--...x.::xx....:.:x..----:.:.:.:xx..x....... 58M2D19M4I19M 68/96 70.8% 100/94230402 0.0% 6/96 6.2% 55680871 NA +3004 chr4 + 190214555 59373154 59373153 59373188 35 TTCTCTTTTTGTTGTTGTTGTTGTTTGTTTGTTTT chr4 - 94230402 70105253 70105252 70105287 24125116 24125115 24125150 35 TTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTT ..:.:.............................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -10732099 -83498303 +3211 chr4 + 190214555 59373160 59373159 59373198 39 TTTTGTTGTTGTTGTTGTTTGTTTGTTTTGTTTTGTTTT chr4 - 94230402 2688654 2688653 2688692 91541711 91541710 91541749 39 TTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTT ...........................x.x......... 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 56684506 NA +3015 chr4 + 190214555 59373627 59373626 59373686 60 TCTGTGAGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACATATCAAAA chr4 - 94230402 48089495 48089494 48089554 46140849 46140848 46140908 60 TCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAA .....:...x...:...::::........:....x.x........:.x..:..xx..x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 11284132 NA +3050 chr4 + 190214555 59377588 59377587 59377662 75 GCCTTTCACTTAGAAAAGGAAAAAAAAAGAGAGAGAGAGAGAGAAACAGTCAAGGGGCAAAAAGGAGAGATCCTA chr4 - 94230402 44621302 44621301 44621376 49609027 49609026 49609101 75 GCCATTCTTCTTATAATTAAAAAAAAAAGAGAGAGAGAGAGAGAGACTGTGGACAATCAAGAACAGAAAATCCTA ...x...x::.x:x..xx:.........................:..x..x:.x::x...:..x:::.:...... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 14756286 NA +3035 chr4 + 190214555 59377591 59377590 59377634 44 TTTCACTTAGAAAAGGAAAAAAAAAGAGAGAGAGAGAGAGAAAC chr4 - 94230402 2114460 2114459 2114503 92115900 92115899 92115943 44 TTTCATTCAAGAGAGAAAAAAAAAAGAGAGAGAGAGAGAAACAC .....:.:.::.:..:.......................:.x.. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 57263131 NA +3005 chr4 + 190214555 59384872 59384871 59384969 98 AAAGAACATACAATAGAGGAATTATAAATTATATGAATCTATCTTTAAACTGAATTGGACTTCTTAGATATCCTACATGGAAAGGCTGTGGGGCTTAC chr4 - 94230402 84212174 84212173 84212271 10018132 10018131 10018229 98 AATGAAAATATAATGGAAGAACTATGAATTACAACTGATTGTGGTTAAACTGATTTTTATTTCTCAGAAATACCTTTTGAAAACACTTCAGAACTTGC ..x...x...:...:..:...:...:.....:.xxx:x:.:.xx.........x..xx.:....:...x..x.:x:x..:...x:..x::.::...:. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% -24827302 -69403100 +3526 chr4 + 190214555 59461421 59461420 59461535 115 CAGGCT---GGAGTGCAGTGGCCTGATTTTATCTTACGGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTGACTGGAACTACATGTGTGCACCACCAT chr4 - 94230402 18197091 18197090 18197205 76033198 76033197 76033312 115 CAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ......---..x:::..x:x..:..::x.:..x..-.x:.....:x..x..:...........::x.:.x.xx:x........::::...::...........--:.........::. 6M3I26M1D67M2D13M 75/112 67.0% 115/94230402 0.0% 6/112 5.4% 41264330 NA +3134 chr4 + 190214555 59477147 59477146 59477230 84 CATTTTAAAAAGGCAGAGGGAAATTTCTCACACACACAGAAGAGAAGGCAATGTTAAGATGAAGCAGAAAGTCTTTTGAAGACT chr4 - 94230402 65271165 65271164 65271248 28959155 28959154 28959238 84 CATCTTTCATAGGTAGAGAAAAGTTTTACTCAGACACCAAAGACAATATAGAGTTAAGATGATGTAGAAAGTATCTCAATGTCT ...:..xx.x...:....::..:...:x.x..x....x:....x..x::.:x..........x.:.......x.:.::.x.x.. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% -5794018 -88436384 +3409 chr4 + 190214555 59500996 59500995 59501061 66 CTCCTGGGTTCAAGTGATTCTCCTGCTTCAGCCTCTCGAGTAGCTGGGATAACAGGTGCCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:.............x...x.xx.x:.......:..:.........:.:x...x...--...... 58M2D6M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 41303857 NA +3129 chr4 + 190214555 59537862 59537861 59537961 100 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG------ACAG-AGACAAAGACAGAGGCAGAGACAAACAGAGAGAAA--GAGAGATGTAATAATAAATAATGGT chr4 - 94230402 81629064 81629063 81629167 12601236 12601235 12601339 104 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAAT-----GGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAGAGTGGT ..........:.......x.................------....-.xx:...x.:.:.x-----.:.xx...:.......--x....:x::....x.::.x.:.... 36M6I4M1I14M5D16M2I25M 72/95 75.8% 104/94230402 0.0% 14/95 14.7% -22091202 -72139200 +3270 chr4 + 190214555 59537862 59537861 59537901 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................:x.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 40555547 NA +3216 chr4 + 190214555 59537864 59537863 59537898 35 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:........................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% -22091200 -72139202 +3342 chr4 + 190214555 59537864 59537863 59537903 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...................................x::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 40555549 NA +3028 chr4 + 190214555 59540135 59540134 59540186 52 TTTATTCTTTTTCTTTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 2972464 2972463 2972515 91257888 91257887 91257939 52 TCTACTCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTTTATCT .:..:.............:..:.....:......x...:::.x.....x.:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 56567671 NA +3496 chr4 + 190214555 59558268 59558267 59558387 120 AGAGACTATGATTGCAACCCTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAAATATTCCTCTATCCCTTTATTTTGAGCCTATGTGTGTCTT chr4 - 94230402 13027526 13027525 13027631 81202772 81202771 81202877 106 agtgattgtttttgcatcacttCCTTTGTTTTTTTTTTTTTTTT-----TCCTCTCTTCTGCTTCTCCTTTGTTTATTAAATGAT---------TTTTATCTTGACCCCCAGCTTGACTT ..x..:.:.xx.....x.x..x.....x................-----.::.:.:..:.....::.x....:..:x.....:x.---------:.....:....x..:xx.:x..x... 44M5D36M9D26M 75/106 70.8% 106/94230402 0.0% 14/106 13.2% 46530742 NA +3737 chr4 + 190214555 59646394 59646393 59646476 83 CTGCAACCTCTGTCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACACGCCACCGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx:x..:.::..........x...x.xx.x........:............:.:....x.::..--....:... 73M2D8M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 41449268 NA +3204 chr4 + 190214555 59657748 59657747 59657808 61 TCTACAAGCCAGAAGAGTATTCAACATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 56807324 56807323 56807384 37423019 37423018 37423079 61 TTTATAACCCTGAAAAGGGGTAAACATTATAAAAAAAGAAAAAAAGAAAAACAAACAAAAA .:..:..x..x...:..x:x.x......x........:.......:.....x...x..... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 2850424 NA +3024 chr4 + 190214555 59740752 59740751 59740817 66 ATAAAATATGTGTGTATATATACACACATAAATATATATATATATACACATTTTTTATACTTATAT chr4 - 94230402 69706440 69706439 69706505 24523898 24523897 24523963 66 ATAAGATTATTATATATATATACACACACAAGTAAACATATATATATGCCTGTTGTATTTTCATGT ....:..xxx.:.:..............:..:..x.:.........::.x.x..x...x:.:..:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -9965688 -84264714 +5220 chr4 + 190214555 59757972 59757971 59758161 190 CTCAGTATTACAAAAAATAAATGAGCAGAACATTGACTGCAAGACTTTGTCATGATATTTCCTATGTGCAATGGCTAGGCAGGAAATGTTCATTTCATACACCATTTGAGCCTAGCTGCAGTGATTTCACAAAAGC---CAACAGGCTTTGAAAAGTTAATAATAAAGAAAATTTGTTTTTGTTATTTTGAGA chr4 - 94230402 83946672 83946671 83946861 10283542 10283541 10283731 190 CTAAATGCTACTTCAAACAGCAGAGTACAGAAGTGATTGCAAAGCACTGTCTGTGAATTCTTTTTCCGC--TGGGTGGGCAGGGATTTCTCATTTCATACATCATTCACAACTCGCTGCAATGATTCCACAAAGTCACTTAGGAGGCTGAAAACAGTTAATGGAAAAGAAAAACT-TCCTTTTTAGTTTGGGA ..x.:.::...xxx...:.:xx...:.x.:x.x...:.....::.x:....xxx:x...:::.x.x:..--...x.:......:.x.x:............:....::x:x..x......:.....:......:x.---:.:x.....xx:..x.......::x........x:.-.::..x...x....:.. 69M2D65M3I36M1D17M 121/187 64.7% 190/94230402 0.0% 6/187 3.2% -24188700 -70041702 +3166 chr4 + 190214555 59758049 59758048 59758104 56 GGCAGGAAATGTTCATTTCATACACCATTTGAGCCTAGCTGCAGTGATTTCACAAA chr4 - 94230402 88793262 88793261 88793317 5437086 5437085 5437141 56 GGCAGAAATTTTTCTTTTCATACATCATTTACAAGTAGCTGCAGTGAGTCCACAAA .....:..x.x...x.........:.....:x:xx............x.:...... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -29035213 -65195189 +3188 chr4 + 190214555 59767756 59767755 59767830 75 TCTAATGTCAGCGTTTTGGAT-TTTTTCTTTTTCTTTTTCTTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 4658064 4658063 4658139 89572264 89572263 89572339 76 TCCAACTTCAGATTTTTAATCATTTTTATTGTGCCTTTACTGTTCTCTCTCTCTCTTTTTTTTTTTTTTCTGTTGA ..:..:x....xx....::x:-.....x..x.x.:...x..x..:.:...:..................:.x.... 21M1I54M 55/75 73.3% 76/94230402 0.0% 1/75 1.3% 55109692 NA +3172 chr4 + 190214555 59797445 59797444 59797490 46 TTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGTTTAGATGAAGT chr4 - 94230402 39479570 39479569 39479615 54750788 54750787 54750833 46 TTTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTCATATGGATGAAAT .........:...:...:..............::.x.:......:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 20317875 NA +3335 chr4 + 190214555 59799141 59799140 59799248 108 TTTGTATATTCC------TAAGATATATATATATATATATATACACACACACACACACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACAC chr4 - 94230402 14964772 14964771 14964884 79265519 79265518 79265631 113 TTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......:.:..x------:..::.::..x......x.x:.:.-::::x.....x.:.:::x::.:::.:..:.:......:........xx:.:...:..:............. 12M6I24M1D71M 68/107 63.6% 113/94230402 0.0% 7/107 6.5% 44834369 NA +3020 chr4 + 190214555 59799153 59799152 59799220 68 TAAGATATATATATATATATATATACACACACACACACACACACACACATACATATGTGTATATATAT chr4 - 94230402 87372727 87372726 87372793 6857610 6857609 6857676 67 TAAGAGAAAAAAAT-TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT .....x.x.x.x..-...x.x:.x...........x.........:x:....:.....:::....... 14M1D53M 51/67 76.1% 67/94230402 0.0% 1/67 1.5% -27573574 -66656828 +3626 chr4 + 190214555 59799157 59799156 59799259 103 ATATATATATATATATATATACACACACACACACACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACA chr4 - 94230402 73121107 73121106 73121209 21109194 21109193 21109296 103 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..::....x:...:.:.........x.x:..::x::...:..::...x:..:::.x:.....:.:x:.::...:.x....:.x....x.x.......:::.:. 103M 63/103 61.2% 103/94230402 0.0% 0/103 0.0% -13321950 -80908452 +3659 chr4 + 190214555 59799158 59799157 59799267 110 TATATATATATATATATATACACACACACACACACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTG--AGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x:...:...:.:.....x.x:..::x::......:...:x...:.::x:..:....:--x:..:.:.:.x.:..:.x....x.x........:.... 70M2D38M 68/108 63.0% 108/94230402 0.0% 2/108 1.9% -13321944 -80908458 +3601 chr4 + 190214555 59799163 59799162 59799284 122 ATATATATATATATACACACACACACACACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACA-CACACATATATATATATACACATAGCAGT chr4 - 94230402 4417343 4417342 4417465 89812938 89812937 89813060 123 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAAT ..x..x.:...................x:x...:..:...:x:x:.x..:.:..:...xx.x.:..x:.x...:.....:.:x:.:x:.:.::-....x.:.:xx.:.....x..xx....:. 93M1I29M 77/122 63.1% 123/94230402 0.0% 1/122 0.8% 55381820 NA +3962 chr4 + 190214555 59799164 59799163 59799278 115 TATATATATATATACACACACACACACACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATATATATATATACACAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.::..::....x..:.....:.:.....x.x:..::x::.:..::.....x:..:..:x.....::.:x::...:.:.x.:..:.x....x.x...:.:..:....x:..x.. 115M 70/115 60.9% 115/94230402 0.0% 0/115 0.0% -13321938 -80908464 +3023 chr4 + 190214555 59799172 59799171 59799224 53 TATATACACACACACACACACACACACACATACATATGTGTATATATATACAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x..x...........x..........x:...:..:.:..::....:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -27573569 -66656833 +3116 chr4 + 190214555 59799191 59799190 59799256 66 ACACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:.::.x::::....:.:.::.:..::.:......xx:.......::............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 44834372 NA +3369 chr4 + 190214555 59799193 59799192 59799258 66 ACACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:..::x.::....::.:.::.::.......:.:.xx........::............. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 44834374 NA +3227 chr4 + 190214555 59799195 59799194 59799260 66 ACACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x...::.x..:..:.::.:.::::.:.:..:...:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 44834376 NA +3041 chr4 + 190214555 59799196 59799195 59799263 68 CACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATA chr4 - 94230402 8395803 8395802 8395870 85834533 85834532 85834600 68 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.x.:.::...x.::....:...:.x.::..xx...:...............x.....x.::x... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 51403393 NA +3179 chr4 + 190214555 59799196 59799195 59799269 74 CACACATACATATGTGTATATATATACATGTATA----CATATACACACACACACACACACACACACACATATATATA chr4 - 94230402 54293151 54293150 54293228 39937175 39937174 39937252 78 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..x.:::....x.:.........:..::.....:----:..:..x.xxx::......x...::............... 34M4I40M 53/74 71.6% 78/94230402 0.0% 4/74 5.4% 5506045 NA +3633 chr4 + 190214555 59799197 59799196 59799261 65 ACACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .....x.:..:.x..::.:.::.:..:.....::.......xx........::............ 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 44834378 NA +3134 chr4 + 190214555 59799198 59799197 59799265 68 CACATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATATA chr4 - 94230402 8395803 8395802 8395870 85834533 85834532 85834600 68 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.x....:.:.x..:....:..:::x..:.:xx...................x.....x.::x... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 51403395 NA +3020 chr4 + 190214555 59799200 59799199 59799278 79 CATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATATATATATATACACAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:::.:.:...:.::...x........x:.:...:::.::.x:...:xx.:.........:.:.:.:.x.:...x.. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 51403413 NA +3651 chr4 + 190214555 59799200 59799199 59799267 68 CATACATATGTGTATATATATACATGTATACATATACACACACACACACACACACACACACATATATA chr4 - 94230402 8395803 8395802 8395870 85834533 85834532 85834600 68 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....x.:....:.x..:....::...:x.....xx.:.................x.....x..:x... 68M 52/68 76.5% 68/94230402 0.0% 0/68 0.0% 51403397 NA +3708 chr4 + 190214555 59819425 59819424 59819496 72 CTACAACCTCCATCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:..:xx.x..:.::........::x...x.xx.x........:............:......x..:. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 41622299 NA +3014 chr4 + 190214555 59819665 59819664 59819704 40 GAGAGACAGACAGACACACACACACACAGACACACATCCA chr4 - 94230402 47140419 47140418 47140458 47089945 47089944 47089984 40 GAGAGACAGACAGACAGAGACACACAGAAACACACATCCA ................x.x.......x.:........... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 12679246 NA +3221 chr4 + 190214555 59899312 59899311 59899354 43 CTCTCTCTCTCCATATATATATATATATATATATATATATATA chr4 - 94230402 67224365 67224364 67224407 27005996 27005995 27006038 43 CTCTCTCTCTCCAAATACATATAGATATATAAATATATATATA .............x...:.....x.......x........... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% -7325053 -86905349 +3092 chr4 + 190214555 59899338 59899337 59899386 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTATATACACATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x....................x:.:.:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 55492915 NA +3068 chr4 + 190214555 59899341 59899340 59899397 57 TATATATATATATATATGTGTGTGTGTGTGTGTGTATATACACATATATGTATATAT chr4 - 94230402 32959568 32959567 32959624 61270779 61270778 61270835 57 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATAT .:.:..:x....:..:x....x.....::...:.........:.....::x...... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 26939773 NA +3335 chr4 + 190214555 59899362 59899361 59899421 60 GTGTGTGTGTGTGTATATACACATATATGTATATA----TATACAAATATATGTATATATACAG chr4 - 94230402 47095164 47095163 47095227 47135176 47135175 47135239 64 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACAG .....:........:..:.......:.....:...----x..x..x:.:....:.....:.... 35M4I25M 48/60 80.0% 64/94230402 0.0% 4/60 6.7% 12804198 NA +3013 chr4 + 190214555 59899669 59899668 59899745 77 TATATGTGTGTATATACATGTACGTGTGTATATACATGTACATGTATATGTGTGTATATACATGTACATGTATATGT chr4 - 94230402 81401294 81401293 81401370 12829033 12829032 12829109 77 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGT ...x.x.....x.:.::x.:x.x:.:.:..:...x:x.........x:.......:....x....x...:.:x.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -21501625 -72728777 +3192 chr4 + 190214555 59899734 59899733 59899800 67 ACATGTATATGTGTGTATACATGTATATGTGTATGTGTGTGTATACATATATACATATACACATATA chr4 - 94230402 8395788 8395787 8395854 85834549 85834548 85834615 67 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACA .::...:........:...x.::.:...x.::..:...:..:x.....xx.....:.:.....:.:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 51503946 NA +3494 chr4 + 190214555 59899739 59899738 59899818 80 TATATGTGTGTATACATGTA---TATGTGTATGTGTGTGTATACATATATACATATACACATATATGTGTGTATATATACATA chr4 - 94230402 70982598 70982597 70982680 23247723 23247722 23247805 83 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA .....:.:.x...x......---.x.x.x:x.........:..::.:.:.......::x....x........::...:...:. 20M3I60M 58/80 72.5% 83/94230402 0.0% 3/80 3.8% -11082859 -83147543 +3077 chr4 + 190214555 59899747 59899746 59899803 57 TGTATACATGTATATGTGTATGTGTGTGTATACATATATACATATACACATATATGT chr4 - 94230402 32959568 32959567 32959624 61270779 61270778 61270835 57 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATAT ...:...x.:..:...x..:.x.....:::.:.:............:...x....:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 26940179 NA +3018 chr4 + 190214555 59899750 59899749 59899801 52 ATACATGTATATGTGTATGTGTGTGTATACATATATACATATACACATATAT chr4 - 94230402 81378296 81378295 81378347 12852056 12852055 12852107 52 ATAAATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGATTTGT ...x..:.........:..x.....:..........:.:.x....x..x.:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -21478546 -72751856 +3014 chr4 + 190214555 59899769 59899768 59899817 49 TGTGTGTATACATATATACATATACACATATATGTGTGTATATATACAT chr4 - 94230402 66471242 66471241 66471290 27759113 27759112 27759161 49 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT ......::.::...:..:.............:...x....x...:.:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -6571473 -87658929 +3687 chr4 + 190214555 59905253 59905252 59905372 120 TGGTCTTTCCAAATGTCCTCACTGGAACTTACATATATATAAA--------------ACCATATATACATATATATATACACACACACATATACATATATATACACATATGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630072 71630071 71630205 22600198 22600197 22600331 134 TAATCTTTCCAGGTTTTCTAATTTGGAACAAAGTAGAAGCAGATCAGGATTTTCACTATCACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::........::.x.:..x.:.x.:.x:x.x:..x.x::.:.--------------.:..:x..:::::..::.............x..........x.x.::.:::......x..::....x:.:....... 43M14I77M 76/120 63.3% 134/94230402 0.0% 14/120 11.7% -11724819 -82505583 +3467 chr4 + 190214555 59905266 59905265 59905344 79 TGTCCTCACTGGAACTTACATATATAT----AAAACCATATATACATATATATATACACACACACATATACATATATATACAC chr4 - 94230402 24136180 24136179 24136262 70094141 70094140 70094223 83 TGTTTTTTCTAGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ...::.:x..:...:x.:.........----::...::.x....:.:.....:.....x...x...x.:...:....x..... 27M4I52M 57/79 72.2% 83/94230402 0.0% 4/79 5.1% 35769086 NA +3123 chr4 + 190214555 59905286 59905285 59905353 68 TATATATAAAACCATATATACATATATATATACACACACACATATACATATATATACACATATGTGTG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:......xx:........::.....x.:.....::x...::.::x....:.:..::...:....:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 11738248 NA +3321 chr4 + 190214555 59905304 59905303 59905374 71 TACATATATATATACACACACACATATACATATATATACACATATGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...:.::..::...:.........x...:.:....x.x:::..:::.....x..::....x:.:....... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% -11724831 -82505571 +3126 chr4 + 190214555 59905327 59905326 59905379 53 ATATACATATATATACACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.....:..:...:.:.x.....:...x::.............. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 40201053 NA +3138 chr4 + 190214555 59909373 59909372 59909460 88 ACCTGTAATCATATGAGTTAATACTCAAAAAACTCCCCTTTTTATACATACATATATATACACATATATATATATATACACACACACA chr4 - 94230402 45271644 45271643 45271728 48958675 48958674 48958759 85 ACCAATCATCATGAGGAGAAAGATTGGAAAAATCACTAACTTC---CATATCTATATATACACACATATATATGTATACAAACACACA ...x:.x.....:x.::xx..x.:.x:.....::x.:xx:..:---....:x............:........:......x....... 43M3D42M 59/85 69.4% 85/94230402 0.0% 3/85 3.5% 14637729 NA +3122 chr4 + 190214555 59915470 59915469 59915538 69 ATATATATACACACATATACATATATGTATGTGTGTGTATGTGTGTGTGTGTACATATATATATATACA chr4 - 94230402 58439388 58439387 58439456 35790947 35790946 35791015 69 ATGCACACACACCCATGCACCCATCAATGTGTAAGTGCATGTATGTGTGTGCACATATACCTACAGACA ..::.:.:....x...::..x:..xx:.:...:x...:....:........:.......:x..:.x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 1476082 NA +3025 chr4 + 190214555 59915498 59915497 59915538 41 ATGTGTGTGTATGTGTGTGTGTGTACATATATATATATACA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:..:..........:.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -29905783 -64324619 +3400 chr4 + 190214555 59933183 59933182 59933361 179 TCATTCTCCTTCCTTC-ATTCTTCCTTCCTTCCTTCTTTCCCTTCCTTCCTTCCTTCTTTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTTGTAATCCTTGGCTTTCTCATATTTTGG chr4 - 94230402 45185590 45185589 45185753 49044650 49044649 49044813 164 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCT-TTCTTTTCTTTCATTTTTC-------ACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTT---CTCACTACTTGTCTTTCTAACCACCCCTAATCTCTT-----ATTCTTTTCTCTTTAATCTTTTAG .....:...:..:.:.-.x...:xx..:::.x....x...:-...:..:...:.x.:....-------x....:....:...:..xx:..:.:....:..:x...xx.x.:.---:..x:.x...x:......xx..x::.:.xx.:....-----..:...xx..:.:.x..x....:. 16M1I24M1D19M7D44M3D36M5D24M 105/163 64.4% 164/94230402 0.0% 17/163 10.4% 14747593 NA +3257 chr4 + 190214555 59933221 59933220 59933326 106 CCCTTCCTTCCTTCCTTCT-----TTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTTCTTTCCTTTCTTTC chr4 - 94230402 93005082 93005081 93005192 1225211 1225210 1225321 111 CCCATCCTCCCCTCCCCGTGCAGCTGCCTGGGCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCTC ...x....:..:...::x.-----.x.:.xxx:..x:.......:..:x........:x.xx:.x:.:...::..:..x......:x.....x..:..xx....:.:.:.. 19M5I87M 68/106 64.2% 111/94230402 0.0% 5/106 4.7% -33071861 -61158541 +3011 chr4 + 190214555 59933293 59933292 59933341 49 TTCCTTCCTTCCTTTCCTTTCTTTCCTTTCTTTCTTTCTTTTGTAATCC chr4 - 94230402 92014229 92014228 92014277 2216126 2216125 2216174 49 TTCCTTCCTTTCTTTCCTTTTTCTTCTCTCTTTTCTTTTGCTGTAACTC ..........:.........:.:.:..:.....::..:.x:.....::. 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% -32080936 -62149466 +3503 chr4 + 190214555 59940251 59940250 59940411 161 ACACACACATTTATATATATACATATATATTATATATATACACACACACATATATACACACACATATATCTTATATAAAATAAGATATATAGTAAATGTATAAATATATCTCTTTATATATATAAATATATCCATATTATAAATCTATTTATATGGATATA chr4 - 94230402 67999885 67999884 68000033 26230370 26230369 26230518 149 ACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGACTTGCACCATCTTCTCTCATAAAA-AAGTTCTGTGTTAACTGT-----------TCTTTGAAGCCAGAAACATGCATTTTGCATACATCTAGATGTACAGATGCA ..........x:........x...::.:xx..........::......x.x.:.x..x::...xxx:x...:x:......-...x.x.:.:x...x...-----------.....:x.xx:.x...:..::x:x.xx:...x.....xx.:..::...::. 80M1D18M11D51M 95/149 63.8% 149/94230402 0.0% 12/149 8.1% -8059634 -86170768 +3013 chr4 + 190214555 59952211 59952210 59952283 73 ATATATGGGATATGTGTGTGTGTATGTGTGTGTGTGTATATATACATTACATATATATGTGTATATATATAAA chr4 - 94230402 41863333 41863332 41863405 52366998 52366997 52367070 73 ACAAATTAAATACGCACGAGTTCATGTGCGTGTATGTATGTACACATTAAAAAAAAATGTGTACATGCAAAAA .:.x..x::...:.:::.x..x:.....:....:.....:..:......x.x.x.x.......:..::.x... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 18088878 NA +3048 chr4 + 190214555 59970632 59970631 59970715 84 ATATATAATATATATATCTATATATATATTTACCTACATATGTATATATATTTTTATGTGCATATATATATTTTGTGTGTGTGT chr4 - 94230402 24478096 24478095 24478179 69752224 69752223 69752307 84 ACGTGTAATGTACAAATATGTCTAAATATTTTAATGTAAATGTAAATATCTCTATATGTAAATATTTACATTGCATATGTGTGT .::.:....:..:.x..x.:.x..x......xxx.::.x.....x....x.:.x.....:x....x..:...x::.:....... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 35492536 NA +3111 chr4 + 190214555 59987802 59987801 59987871 70 TTTTTTTTGTTGTTGTTGTTGTTGTTGTTTTTGCCTAATTCGTACTATAAACCTCTTACT-CTATGTTACT chr4 - 94230402 54545410 54545409 54545480 39684923 39684922 39684993 71 TTTTTTTTGTTGTTGTTGTTGTTGCTGCTACTGCCTAAATGTTACTGGTAGTTTCCTTTTATTATGTCATT ........................:..:.x:.......x.xx....:xx.:::..:.x:.-:.....:.:. 60M1I10M 51/70 72.9% 71/94230402 0.0% 1/70 1.4% 5442392 NA +3147 chr4 + 190214555 60004651 60004650 60004712 62 CACACACACACACGCACACACACACACACACACATATATATATATATTTCTTCCAAAAATAT chr4 - 94230402 87372747 87372746 87372808 6857595 6857594 6857656 62 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAATTAT ..x..........:x.........:x:.:..::..:..::............xx::..x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -27368096 -66862306 +3096 chr4 + 190214555 60007281 60007280 60007328 48 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGTCAGCAACATTTA chr4 - 94230402 13723346 13723345 13723393 80507010 80507009 80507057 48 AAGAAAAAATAAAACAAAAAAAAAGGAAAAACATGGCAGCAAAATTCA ..:......x....x.........::.........x......x...:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 46283935 NA +3258 chr4 + 190214555 60039059 60039058 60039133 75 TATGTATGCATATGTTTGTGTGCCTATGTATGTGTCTATATGTGTATGTGTCTATATATATGTATAAACATAATT chr4 - 94230402 86633731 86633730 86633805 7596598 7596597 7596672 75 TATGTACTTGGAAGTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATAAACAAAGTT ......:x::x.x..:.x....::.......:.:.xx..x....:......x.:.x....x.........x.:.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% -26594672 -67635730 +3390 chr4 + 190214555 60066058 60066057 60066134 77 TATTCCTGAAATGAGTGTGAATTAGGTTTTTGTTTTCTTTAATTTTTCTTTTTTTGTTTCTTTTCTTTTCTTTCTTT chr4 - 94230402 28082846 28082845 28082921 66147482 66147481 66147557 76 TATTGCTACAAGGAGTATGTATTGGGAAGTCATTTTCTCTGCCTTTTTTATTTTTGTTTC-TTTCTTTTCATTCTTT ....x..:x..x....:..x...:..xxx.::......:.:x:....:.x..........-.........x...... 60M1D16M 57/76 75.0% 76/94230402 0.0% 1/76 1.3% 31983212 NA +3105 chr4 + 190214555 60066124 60066123 60066179 56 TTTCTTTCTTTTTTTTTTTTTTTCTTTTTTTTGGGATAAAGTCTCACTTTTTTGCC chr4 - 94230402 61854693 61854692 61854748 32375655 32375654 32375710 56 TTTTTTTCTTTTCTTTTTTGTTCCGTTTTATTTTGAAAAAGTTTCACTACTTTGCC ...:........:......x..:.x....x..xx..x.....:.....x:...... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -1788569 -92441833 +3413 chr4 + 190214555 60084027 60084026 60084091 65 GGAAGTAAAACACTGCTCAGTAAATG--------GAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACACA chr4 - 94230402 40371478 40371477 40371550 53858853 53858852 53858925 73 GGGAATAATTAACTGCAGAGTATATATATGAGGCAAAAAAAAAAAAACAACAAACAAACAAACAAAAAACACA ..:.:...xxx.....xx....x..:--------:............x......................... 26M8I39M 54/65 83.1% 73/94230402 0.0% 8/65 12.3% 19712549 NA +3012 chr4 + 190214555 60084047 60084046 60084095 49 TAAATGGAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACACAAATT chr4 - 94230402 70200774 70200773 70200822 24029581 24029580 24029629 49 TAAATAAAATACAAAATAATAACAAACAAACAAACAAAAAACCCACATT .....::..x.x....x..x......................x..x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -10116727 -84113675 +3434 chr4 + 190214555 60084055 60084054 60084132 78 AAAAAAAAAAAAAACAAACAAACAAACAAAAAACACAAA------TTATAAAAAGCAGTCTCTCAGACCACAGTGCAATCAAAT chr4 - 94230402 81661610 81661609 81661692 12568711 12568710 12568793 83 AAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTTCCCAAAAAGCCGTTCAACAG-CCACACTGAAATAATAT .........x.......................x...:.------.:x:.......x..::xx...-.....x..x...x.x.. 39M6I21M1D17M 62/77 80.5% 83/94230402 0.0% 7/77 9.1% -21577555 -72652847 +3050 chr4 + 190214555 60090536 60090535 60090609 74 ATTTTTTAAAGCAATCAGCAAAATGGACAAATCTTTAGACAAAGAAAAAAAGAAAAATTACTGAAATCAGAAAA chr4 - 94230402 8468646 8468645 8468719 85761684 85761683 85761757 74 ATCTCTAAAAGGAAACAGTATAATGGAAAAAGGTTTAGAGAAAGACAAACAGAAAGATTACAGTTATGGGACAA ..:.:.x....x..x...:.x......x...xx......x.....x...x.....:.....x.xx..x:..x.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 51621890 NA +3016 chr4 + 190214555 60122983 60122982 60123099 117 TACATATATGCATATACGTATACATGTATATATGCATATACGTGTACATGTATATATGTATATACGTATACATGTATATATGCATATACGTATACTTGTATATATACATATACGTAT chr4 - 94230402 68323944 68323943 68324060 25906343 25906342 25906459 117 TGCGTAGTTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTAAAGAAAACCAGAGGTATTTTTGGTTATGGGAATATTCATGT .:.:..xx.:::....x.:..:::.x........x...x.x....:..:..x..:......::.x::.x.:.....x.x.x:xx:.x.x....x:...xx...:x:x....x.:.:. 117M 70/117 59.8% 117/94230402 0.0% 0/117 0.0% -8200961 -86029441 +3152 chr4 + 190214555 60220812 60220811 60220869 58 TAAGACAGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATA chr4 - 94230402 4406414 4406413 4406471 89823932 89823931 89823989 58 TAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...xx...x...::........xx....x..................:.x::.:.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 55814398 NA +3162 chr4 + 190214555 60220821 60220820 60220870 50 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...:.......::.......x.....:...x::.............:x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 40516541 NA +3077 chr4 + 190214555 60220822 60220821 60220927 106 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT-------------------ATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATATGTG chr4 - 94230402 48089497 48089496 48089621 46140782 46140781 46140906 125 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAAACTGTACCACTGTG .:..x:.x.:......:.:........:....x.x........:.......-------------------.::.x...xxxx...:..x..x..::::.:....x....x.xx....:xxx.... 51M19I55M 72/106 67.9% 125/94230402 0.0% 19/106 17.9% 12131325 NA +3041 chr4 + 190214555 60220824 60220823 60220929 106 TATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGT-ATATGTAT----ATATATGTATATATGTATATATGTGTA chr4 - 94230402 48089497 48089496 48089605 46140798 46140797 46140906 109 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-TACACA-AAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTA .:..x:.x.:......:::........:....x.x................-..:.:.-:x...xxx....-.:..x...----...:..x.:x..::::.:....x.... 51M1D6M1D12M1I8M4I27M 74/104 71.2% 109/94230402 0.0% 7/104 6.7% 12131327 NA +3076 chr4 + 190214555 60220850 60220849 60220936 87 TGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATA-TGTGTATGTATAT chr4 - 94230402 1888758 1888757 1888845 92341558 92341557 92341645 88 TGTGTTAACGATTGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATAT .....xx::.xx..x:....:.......:.xxx..::x.x......:..:....:.....x..x.:........-.x..:..:x.... 74M1I13M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 58332092 NA +3076 chr4 + 190214555 60220850 60220849 60220936 87 TGTGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATA-TGTGTATGTATAT chr4 - 94230402 1885617 1885616 1885704 92344699 92344698 92344786 88 TGTGTTAACGATTGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATAT .....xx::.xx..x:....:.......:.xxx..::x.x......:..:....:.....x..x.:........-.x..:..:x.... 74M1I13M 60/87 69.0% 88/94230402 0.0% 1/87 1.1% 58335233 NA +3038 chr4 + 190214555 60220852 60220851 60220923 72 TGTGTGTGTGTGTGTATATATATGTATATATGTATATATGTGTATATGTATATATATGTATATATGTATATA chr4 - 94230402 8395789 8395788 8395860 85834543 85834542 85834614 72 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .......:......:...x.:......x..::...:....:x..:..xx...:.:.:::.:.:.:::.x.:. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 51825063 NA +3090 chr4 + 190214555 60220880 60220879 60220955 76 TATGTATATATGTGTATATGTATATATATGTATATATGTATATATGTGTATGTATATGTGTATATATGTATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATA .:....:...:x.......::..::.:.x:.....xx..:...............x:::::.:.---:........ 64M3D9M 51/73 69.9% 73/94230402 0.0% 3/73 4.1% 22857840 NA +3408 chr4 + 190214555 60220991 60220990 60221162 172 ATATGTATATATATGTATATATATGTGTATATATGTATATATATGTGTATATATGTGTGTATATATGTATGTATATGTGT---ATATA----------TATGTATGTATATGTGTATATATATGTATATATATG----TGTATATATATATGTACATTAGTT---AAGACAGTAAGTTTTTGGTAATTTGGT chr4 - 94230402 40224636 40224635 40224824 54005579 54005578 54005767 189 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCAT---TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGTTTTGGGAATTGTAGGTTTATGTCAAGCTGAT ...:x....:.......xx.x.x....:.xxx:x::.x..x.x.....:.:.:...:.........:x..::........---.....----------.x..:..x:..---.::.:.:...x...xx..x...----...x.....:.x.::...:xx...---:::.:x...:....x..x:..x:..:. 80M3I5M10I11M3D22M4I24M3I27M 111/169 65.7% 189/94230402 0.0% 23/169 13.6% 19996355 NA +3078 chr4 + 190214555 60251215 60251214 60251290 76 CAATCACACATATATGTGTACACACACATGTATATACGTATATATAAACACACACATTCAAATACACACACATATA chr4 - 94230402 54293151 54293150 54293226 39937177 39937176 39937252 76 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATA ...x::.....x.....:..:.:::.::.....:xxx....:..x..xx::.....::..x:........:..... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 5958064 NA +3277 chr4 + 190214555 60251220 60251219 60251285 66 ACACATATATGTGTACACACACATGTATATACGTATATATAAACACACACATTCAAATACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x......x.:.:::::..::::.:..:.......:.:x.........x..x.:........ 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 45286401 NA +3037 chr4 + 190214555 60261983 60261982 60262030 48 CTTTCTTTTCTTTCTTTCTTTCCTTCCAACTCCCAGAAAGAATTACTT chr4 - 94230402 15692203 15692202 15692250 78538153 78538152 78538200 48 CTTTTTTTTCTTTTTTTTTTTCCTTCCCCCCCCCAGGAATAAATACTT ....:........:...:.........xx.:.....:..x..x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 44569780 NA +3673 chr4 + 190214555 60312559 60312558 60312650 92 TTTTTGTTT--TTGTTTTTTAAAAAAACAAACAAACAAACTACCTATACTCAATGTGGAGGATTCATAAACTAGTCACGAACTACTTGATGAAA chr4 - 94230402 67291267 67291266 67291360 26939043 26939042 26939136 94 TTTTTGTTTGTTTGTTTTTTAAAAAACCAAACAAACAAACAACTCATCTCCTTCAAAAGAGCTTTGTACATCTGTCACAACTCACTTGCTGAAA .........--...............x.............x..::..x::.xx::x::::.x..::..x.::x.....:.x::.....x..... 9M2I83M 64/92 69.6% 94/94230402 0.0% 2/92 2.2% -6978708 -87251694 +3897 chr4 + 190214555 60337987 60337986 60338316 330 CTCTCTATTTCTTCTTATAGTTTTAATGTCCTTAAAAATTGGTTGTTTCCTTCCTGTAATTCTTATTTTAGGGCTACATTTCTCATTACATTTTTTTCCTCACGTTCTTACTTCTTT-----------------GGCCACTCTTTTAAATATATGCATCTGTGTATGTGTATGTTTTTATTTCGATTTGTATGTAGCTTTTTCTTGATTTGGAGAACTTTTTTTTATTTATCTTATATCAAACTATGAAAATCTTTCACTTATTCAAGTT---------TTTTTAACCAAAGACTCTTAGTTTTTCTTTTTTTTCTTTTTACTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4657813 4657812 4658137 89572266 89572265 89572590 325 CCctttatttccttttcttgtccttttcttcct------------tctttctcttttctttctttcttt-------cattccc--tttcatttctttcttttttttctttctctttttcAGTGTTGGATGTCGTGTTCATTGATTTCAATAATTACTGTAGCCTCCATACCTGCATTCTTTCCCGTTAATTGAAGGGTTTATTTTAAACTGG-GTACTTTAATATGTATGTCTTG-ATTAAACTAAA-------TTCCCTTATTTGATTTGATTGCCTCCCTCCAACTTCAGATTTTTAATCATTTTTATTGTGCCTTT-ACTGTTCTCTCTCTCTCTTTTTTTTTTTTTTCTGTT .:..:......:.:..x.x..::.xx.x.:.:.------------.:.:::..:.x.xx.....x:...-------....:.:--..x.....:....:.:x:x.....x..::...-----------------.x:..:.xx...x....xx.:.xx:x.:x.x::.::x..:x..:x..:.x:..x:.xx:x:.x...x.:..:.x:...-.x.....xx.x.:.x.:....:-..:......x:-------...x......::.x..---------::.::...:xx...:.:...:.:x..:..x..x.x.:...-...x:...........:..............:.x.. 33M12D24M7D7M2D32M17I78M1D22M1D11M7D16M9I40M1D36M 186/299 62.2% 325/94230402 0.0% 57/299 19.1% 55680174 NA +3202 chr4 + 190214555 60338217 60338216 60338318 102 AAAATCTTTCAC-----TTATTCAAGTTTTTTTAACCAAAGACTCTTAGTTTTTCTTTTTTTTCTTTTTACTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193277 40193276 40193369 54037034 54037033 54037126 93 aaaatCTTTAGTGGGCATTATTGGAGTTGTTTCATC--------------TTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTT .........x::-----.....x:....x...:.x.--------------......:.:.:.x::.......:...xx:..::x:................:..... 12M5I19M14D57M 65/88 73.9% 93/94230402 0.0% 19/88 21.6% 20144940 NA +3400 chr4 + 190214555 60338257 60338256 60338312 56 TTAGTTTTTCTTTTT--TTTCTTTTTACTTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339953 49339952 49340010 44890393 44890392 44890450 58 TTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ....:x.........--.x.x...:.x...........................::.. 15M2I41M 48/56 85.7% 58/94230402 0.0% 2/56 3.6% 10998304 NA +3055 chr4 + 190214555 60338281 60338280 60338317 37 ACTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929911 18929910 18929947 75300456 75300455 75300492 37 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:..............:.:.................. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 41408370 NA +3148 chr4 + 190214555 60343302 60343301 60343353 52 TTTTTTTCATATGTGTGAGCTTTCTCATTACTTTTTGTTGTTGCTGTTAGTT chr4 - 94230402 31220379 31220378 31220430 63009973 63009972 63010024 52 TTTTTCCCATAGTTGTGGGTTTTCTCTTTGCTTTTTTCTGTTGTTGTTAGTT .....::....xx....:.:......x..:......x:.....:........ 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 29122923 NA +3384 chr4 + 190214555 60344194 60344193 60344276 83 ATCAGGGCTCACAGCGTCTTAACCTTCTGGGCTCATAGAATTCTCTAACCTCAGCCTTTTGAGTAGCTGGGACTACAGGTGCA chr4 - 94230402 18197118 18197117 18197198 76033205 76033204 76033285 81 ATCATGTTCTACAGC--CCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ....x.x:::.....--.:x..x........:...x:x:x...x.x::x..........::.........:......x..... 15M2D66M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 42147076 NA +3261 chr4 + 190214555 60358139 60358138 60358286 148 TTTTCTTTTATTTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTCTTCTTTTTCTTTTCTTTCTCTTTCTTTTTTTCTTCTCTCTCTCTT--TCTTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTTTCCTTTTCTTTCTT chr4 - 94230402 18235258 18235257 18235407 75994996 75994995 75995145 150 TTCTCCCTTGCTGTTTTTCTAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTTAGGTTTCTTATTGTCATGTTCATCCTACCTTCTTGTGTGCGGTATTCCTCTGACTACAACCTCACATCTTTCTT ..:..::..::.x...:.:.xx..:.:.:x.x....:.xxx.......::.....x.......x:........::.xxx......x.:x::x.x..--..:.x.....:.x:x.x.xx.x..:....xx..x:xx:::.x:x........ 96M2I52M 89/148 60.1% 150/94230402 0.0% 2/148 1.4% 42122881 NA +3076 chr4 + 190214555 60358142 60358141 60358188 47 TCTTTTATTTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTT chr4 - 94230402 60688300 60688299 60688346 33542057 33542056 33542103 47 TCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCCTTT ......x......:.....:.:....:......::.x.....:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -330158 -93900244 +3725 chr4 + 190214555 60358144 60358143 60358278 135 TTTTATTTTTTCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTTTCTTCTTTTTCTT------TTC---------TTTCTCT-------TTCTTTTTTTCTTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTTTCCTTT chr4 - 94230402 9693679 9693678 9693835 84536568 84536567 84536724 157 TTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ...x......x.:..::.xx...:...:.:.:xx.::...::x..:x.....:....------...---------...:x..-------.....::.:..:::.::.::.:......:x......x::..:x..x...:.:...:..:......:.. 57M6I3M9I7M7I68M 88/135 65.2% 157/94230402 0.0% 22/135 16.3% 50664465 NA +3475 chr4 + 190214555 60358173 60358172 60358292 120 TCTTCTTTCTTTCTTTCTTCTTTTTCTTTTCTT---TCTCTTTCTTTTTTTC------TTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTTTCCTTTTCTTTCTTTCTTTC chr4 - 94230402 24861534 24861533 24861662 69368741 69368740 69368869 129 TTTTCTTTTAATCTGTTCTCTTTTGCTTTCGTTATGCCACTGGCCCTGGTACAAACCATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTC .:......:xx...x.::......x....:x..---:.x..xx.::.xx.x.------..:...:.x..::.x.x..x..:...:.....:..:x:.x:....:.:.......:.::.....:.:.... 33M3I16M6I71M 78/120 65.0% 129/94230402 0.0% 9/120 7.5% 35496639 NA +3182 chr4 + 190214555 60358197 60358196 60358255 59 TCTTTTCTTTCTCTTTCTTTTTTTCTTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTT chr4 - 94230402 65215671 65215670 65215729 29014674 29014673 29014732 59 TTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTT .:..............:.........:.....:.:::...:..:x.xx..:.:.:x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -4857474 -89372928 +3079 chr4 + 190214555 60375448 60375447 60375486 39 AAAATAAATAAATAAATGAAATAAAATAAATAAACAGAA chr4 - 94230402 14337900 14337899 14337938 79892465 79892464 79892503 39 AAAATAAACAAACAAATGAAACAAAATAAATAAACAAAA ........:...:........:..............:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 46037548 NA +3045 chr4 + 190214555 60404914 60404913 60404962 49 AAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAATATTTCTTTAAG chr4 - 94230402 25738884 25738883 25738932 68491471 68491470 68491519 49 AAAAAAAAAAAAAGAGAGAAAAAAGACTTAGAAAACATATTTCTTTAAG .............:.:.:....:...xxx...:..x............. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 34666030 NA +3228 chr4 + 190214555 60406436 60406435 60406486 51 CCTGTGTGTGTGTGTGTATATATATATATAGTAAAGATTTTGTATGCTTTG chr4 - 94230402 63396165 63396164 63396215 30834188 30834187 30834238 51 CCTGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATACCATG ..............................xx.x.x..x......:.:x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% -2989729 -91240673 +3381 chr4 + 190214555 60423739 60423738 60423881 143 AGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGG chr4 - 94230402 93320445 93320444 93320578 909825 909824 909958 134 AGAGCTGGAGGAGGGCAGGGAGTGATAGGGCAAAGCAG---------AAGGTGGGGAGGCACGGGGGTGTGGGGTCTTGGGAAGAATGAACAGGGAAGTGATGTGAGAGAAGCGCAGCACAGAGAGGAGAGGAGGGAAGGAGG ..:.xx......:..x......x..x:.:.x..:.x..---------....x:......x.x..:..x:x..:.xxxx..:::..:x..:x.:.....x:.x.x::..:::.x.x::x:x..:.....::.......:..... 38M9D96M 81/134 60.4% 134/94230402 0.0% 9/134 6.7% -32896706 -61333696 +3065 chr4 + 190214555 60447223 60447222 60447306 84 TCATAAA-CTTGCTAAGCAAAATACATACATATGTGTATATACATGTACACACACACACACACACACACACAAACACAAAGTCGA chr4 - 94230402 28470346 28470345 28470424 65759979 65759978 65760057 79 TCGTAAATCCTATTAAGTAG------TACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAAGTAGA ..:....-.:.::....:.:------.........:..:.:.x.::.::.::........:...:..x......:x:.....x.. 7M1I12M6D59M 55/78 70.5% 79/94230402 0.0% 7/78 9.0% 31976877 NA +3208 chr4 + 190214555 60447224 60447223 60447295 72 CATAAACTTGCTAAGCAAAATACATACATATGTGTATATACATGTACACACACACACACACACACACACAAA chr4 - 94230402 8395803 8395802 8395864 85834539 85834538 85834600 62 CATAAACATG----------TATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA .......x..----------..:x.........:.::x.....xx.:.................x....... 10M10D52M 51/62 82.3% 62/94230402 0.0% 10/62 16.1% 52051421 NA +3006 chr4 + 190214555 60447244 60447243 60447290 47 TACATACATATGTGTATATACATGTACACACACACACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:..:..:.:.:..........xx:.......::............. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 45482406 NA +3113 chr4 + 190214555 60447244 60447243 60447307 64 TACATACATATGTGTATATACATGTACACACACACACACACACACACACAAACACAAAGTCGAA chr4 - 94230402 8395817 8395816 8395880 85834523 85834522 85834586 64 TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAA ......::....:x..:..xx..::...............x.....x.::..:.x...::.x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 52051427 NA +6021 chr4 + 190214555 60502735 60502734 60503098 364 AATATTACCATTCTCTGTCTTTTCTTCTTTTTTTCTCTTTCCTTTTTCTTTC-------------TTTTTTCTTCC------------TGTCCTTCCTTCTTTCCCTCCCTCCTTTCCTTTTTCTTTCTTACCTGCTTACT--TGTTTGCTTG------------ATTCTTTCTTTTCTTTTTTTCTTCTTT----CCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTT---TTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCT----TTTCTTTCCTTTTTTCTTTTCT---TCTTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCT-----TTCTCTCTCTGTCTTTCTCTCTTCCTTTGTTTCTTTCTTTTCCTTT chr4 - 94230402 69435794 69435793 69436211 24794192 24794191 24794609 418 AGTAGTCCCATTTACATTCATCCCTTTTTTTTTTTTTTTTTAAACTTCTTCCCCACTAAGCATGTTTTACCCTTCCACAGTCTTAGTATATCTAGCCTCCCTTCTGTACCCATATTAGTTTTTGCTTCTT-CCCACTTAATAATGTTGGCCTGCCTACCCTTCAAGCTCCTCTTATTCTTTCTTGTTTCTTTTTAACCCTAATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGGGTCTTAC---TTCTTTTCTGACTACTTCACCAAGCTTCTGCCTCTCTTCCCATCTTCTATTTTGGTCCTTTTTATTCCTTT .:..x.x.....:x.xx..x.::...:.......:.:...:xxx:.....:.-------------...x::.....------------.:..:xx...:.:...:x.x..:x:x..xx.....x:.....-..::....x.--....x..:..------------::..:.::.x......:..x:......----....xx..x..:xx:x.........x:.x.:x.:.:::xx..x...:.---.x...:..:..x.x...:....x:.:..:::.:...----.:.:...x.::.....:.:x..---.:........::::...:....x.xx.xxx...:x.---.........xx..x...:x:-----....x:....x.::::x...::.x:....x.:....:.x....... 52M13I11M12I42M1D10M2I10M12I27M4I48M3I36M4I22M3I36M3D20M5I46M 229/360 63.6% 418/94230402 0.0% 62/360 17.2% -8933059 -85297343 +4443 chr4 + 190214555 60502829 60502828 60502983 155 TTTTCTTTCTTACCTG-CTTACTTGTTTGCTTGATTCTTTCTTTTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCT----CTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTT chr4 - 94230402 45185593 45185592 45185751 49044652 49044651 49044810 159 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTC-ACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT .....::....x.:x.-..:.x..x.:.....x................:x..:...-x:.::..:.:.....::xx..:..:.:.....:x::.----......x:.x...x.......xx.:x.::::xx..:..:x:..:.....:..:xx..:... 16M1I40M1D37M4I61M 100/154 64.9% 159/94230402 0.0% 6/154 3.9% 15317236 NA +3070 chr4 + 190214555 60502869 60502868 60502931 63 TTTTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTT chr4 - 94230402 27426821 27426820 27426883 66803520 66803519 66803582 63 TTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ..:...::..x:..x..x:.............:..:......:...::..:...x:.:.x.:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 33076048 NA +3892 chr4 + 190214555 60502871 60502870 60502982 112 TTCTTTTTTTCTTCTTTCCCTCCTTTTTCTCCTCCTTTTTCTTTTCTTTTCTCTTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTC--CCTCCCTCCTTTCTTTTCTTTCCTT chr4 - 94230402 81583171 81583170 81583284 12647119 12647118 12647232 114 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTTTCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTT ....:.....:..:......::.x:xx:..:x....x...::::x:....x.:.....:...xx......:.:x.:xx:........--..:...:....x.x..:x..x.... 87M2I25M 74/112 66.1% 114/94230402 0.0% 2/112 1.8% -21080300 -73150102 +3177 chr4 + 190214555 60502896 60502895 60502992 97 TTTCTCCTCCTTTTTCTTTTCTTTTCTC---TTCTCTTTTCTTTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCTTTCTTTTCTTTCCTTTTTTCTTTTC chr4 - 94230402 35294578 35294577 35294677 58935726 58935725 58935825 100 TTCCTGCACAATTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTC ..:..x.x.xx...:..:..:..::..:---..x.:.:.....:::..x.......x...:...:....:::x:...:::..xx.:x..x.......:.. 28M3I69M 62/97 63.9% 100/94230402 0.0% 3/97 3.1% 25208318 NA +3833 chr4 + 190214555 60502933 60502932 60503069 137 CTTTTCTTTCTTTCTTCTTTCCCTCCCTCC-CTCCTTTCTTTTCTTTCCTTTTTTCTTTTCTTCTTTTCTTTTCTTACTTTTTCTTTCT------------------------TTCTCTCTCCCTTTCT---TTTCTTTCTTCTTTCTTTCT-CTCTCTGTCTTTC chr4 - 94230402 8174015 8174014 8174180 86056223 86056222 86056388 166 CTTTTCCAAATTTCTGCTTTTTTCTCATCCTCTGCTAATTTTTCTCCACTTCTTTATTTTCTTTTTCTCGCTTCCTACTCCTTATTTATTTAAGATAAAAACCTCCAAATAGCTTTTCTTCCCTATTCTGGGTTTCTTTCCCCATCCCCTCTACTCCCTGTCCTTC ......:xxx.....x....:::::.x...-..x..xx:......::x...:...x.......:..:..x:...:....::..x...x.------------------------..:...::..:x....---........::.x.:.::...-...:.....:... 30M1I58M24I16M3I20M1I13M 95/137 69.3% 166/94230402 0.0% 29/137 21.2% 52328918 NA +3188 chr4 + 190214555 60502973 60502972 60503092 120 TTCTTTCCTTTTTTCTTTTC--TTCTTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCTGTCTTTCTCTCTTCCTTTGTTTCTTTCTTT chr4 - 94230402 43081901 43081900 43082022 51148381 51148380 51148502 122 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTT .:.:......:x.x...:xx--.x..x.:.:.:::..x.:....:.....:..x.:....x.x.:::x.:.:xx....xxx:....x.:...x...:.......::..x.:x:.::...... 20M2I100M 73/120 60.8% 122/94230402 0.0% 2/120 1.7% 17421072 NA +3556 chr4 + 190214555 60502975 60502974 60503074 100 CTTTCCTTTTTTCTTTTCTTC---TTTTCTTTTCTTACTTTTTCTTTCTTTCTCTCTCCCTTTCTTTTCTTTCTTCTTTCTTTCTCTCTCTGTCTTTCTCTCT chr4 - 94230402 83960510 83960509 83960611 10269792 10269791 10269893 102 CCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTT-TCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTT .:...x...x....:.::.:.---.x:.....:...xx..:...x.x....-...:xx.....:x.......x....:.::....:..x....:.....x.:. 21M3I27M1D51M 70/99 70.7% 102/94230402 0.0% 4/99 4.0% -23457535 -70772867 +3378 chr4 + 190214555 60507452 60507451 60507523 72 GACAGAGTAAGAC------TCTGCCT-CAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACAAAAGAAAAGAAAAAGA chr4 - 94230402 93527739 93527738 93527817 702586 702585 702664 79 GACAAAACATGACATCATTTCTGCCTGCAACAAGAAAAAAAATAAAAAATAAAAGGGGAATCAGAAGAAAAGAAGAAAA ....:.::.x...------.......-...x..:........x......x....:.::..x..:..........:..:. 13M6I7M1I52M 57/72 79.2% 79/94230402 0.0% 7/72 9.7% -33020287 -61210115 +3008 chr4 + 190214555 60507466 60507465 60507520 55 CTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACAAAAGAAAAGAAAA chr4 - 94230402 59582174 59582173 59582228 34648175 34648174 34648229 55 CTTCCTCAAAAAAAAAAAAAAGAAAAATTAAAAAGATCAACATATAAAGTGAAAA ..x..................:.....xx.......xx....x.x:..:x..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 925292 NA +3120 chr4 + 190214555 60510309 60510308 60510367 59 CCAAAACCAGACAAAGAAGAAAGAAAAGAAAAGAAAAGAAAGAGAGAGGAAGGAACGAA chr4 - 94230402 7711347 7711346 7711405 86518998 86518997 86519056 59 CTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA .:....x....x......:...:.........:.xx::..x:.......:...:.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 52798962 NA +3214 chr4 + 190214555 60510532 60510531 60510622 91 AAAGGAAGGGAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAAAGAAAGAAAAGAAGAAAG chr4 - 94230402 60373493 60373492 60373583 33856820 33856819 33856910 91 AGAGGAGGAAAAGAAGAGGAGGGGTTGGGGGGGCATGGGATGGGAAGAAAATATTTAAGAGAAGCGTAGAGACCAAAAGAAGAGAAAAAAG .:....:.::...:.:.......:xx::..:..x:x....x..:.....::x.xxx..:.:...x:x.:...xx:......:....:.... 91M 57/91 62.6% 91/94230402 0.0% 0/91 0.0% 137039 NA +3631 chr4 + 190214555 60510538 60510537 60510598 61 AGGGAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAG chr4 - 94230402 87012026 87012025 87012086 7218317 7218316 7218377 61 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG .......::..x.:...::.:...:....::..::......:.x:............:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -26501488 -67728914 +3194 chr4 + 190214555 60510541 60510540 60510604 64 GAAGGAAAGGAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAA chr4 - 94230402 59863356 59863355 59863419 34366984 34366983 34367047 64 GAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAAAACACAAAAAAA ...::...:.:...:...:..:.............:.:.:::x..:..x:....x.x:...:.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 647185 NA +3542 chr4 + 190214555 60510550 60510549 60510643 94 GAGGGAGGAAGGAGGGGAGGGAAGGAAAGAAGGAAAGAAAAAAAAGAAGAAAGAAAGAAAGAAAAGAAGAAAGGAA--------GGAAGAAAGAAAGAGAAA chr4 - 94230402 44400495 44400494 44400594 49829809 49829808 49829908 100 GAGGGAGG--GGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA ........--..:......:............:...:..:...:.:.x.::x:...:x...xx.x::.:..x....--------:...:..xx.:....... 8M2D66M8I18M 66/92 71.7% 100/94230402 0.0% 10/92 10.9% 16110055 NA +3148 chr4 + 190214555 60526374 60526373 60526472 99 ATTATAGATACTCTAT---ATGATAGGTTTTGTGAGATATATGTTTGTGCCTATTTCTTATGCATATATATGTTGATATGGTTTGGCTGTGTCCCCATCCAA chr4 - 94230402 55948097 55948096 55948195 38282208 38282207 38282306 99 ATCATTGTTCCTTTATCTCACCACACGTTCCCTGAAATATATGTATGGGCGTATTTCTTATATATATATATTCTGATAAGAAT---CTTTGCCCTGCTCCAA ..:..x.x.x..:...---.:x.:.x...::x...:........x..x..x..........::........x:.....x.:x.---..x..:..:xx..... 16M3I64M3D16M 68/96 70.8% 99/94230402 0.0% 6/96 6.2% 4578277 NA +3023 chr4 + 190214555 60541069 60541068 60541128 60 TTTCTTACTTTTTTCTGAAGTTTTTGGCATCACTGATTTCCTTCAAATGCTCTCTTTCTT chr4 - 94230402 47378454 47378453 47378513 46851890 46851889 46851949 60 TTTCTTATTATTCCCTGAAAGTTTTCCCTTCACTGCTTTCCTTCAAATGCCCAGTTCTTT .......:.x..::.....:x....xx.x......x..............:.xx..::.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 13162615 NA +3163 chr4 + 190214555 60553999 60553998 60554052 54 TTAAACATAAAAGCATTCATTTTTTAAAAATAAGAACACAATAGAAAATTTCTG chr4 - 94230402 69142704 69142703 69142757 25087646 25087645 25087699 54 TTCAACATAGAAGTGTTCTTTTTTTAAAGAAAAAAACACAACAGGAAATCACTG ..x......:...::...x.........:.x..:.......:..:....:x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -8588705 -85641697 +3020 chr4 + 190214555 60572428 60572427 60572477 50 ATGCATACATATATAAATGTATGCATATGTGTGTGTGTGTACACATATAT chr4 - 94230402 48829765 48829764 48829814 45400589 45400588 45400638 50 ATACATATATACATAAATGTATACATCTGTGTGTGCATGTGCAGTTACAT ..:....:...:..........:...x........::...:..xx..:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 11742663 NA +3107 chr4 + 190214555 60572965 60572964 60573030 66 TGTGTACACATATATGTGTGTATGTGTGTGTGCATATATATGCGTACACACACACATATATACATG chr4 - 94230402 32959568 32959567 32959629 61270774 61270773 61270835 62 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATA----CATATATACAAATATATTCATG .......x:...:...x....x.....::....:......----:.:.:.:...x......x.... 40M4D22M 48/62 77.4% 62/94230402 0.0% 4/62 6.5% 27613397 NA +3328 chr4 + 190214555 60593236 60593235 60593301 66 TTTTCTTTTATTTATATTGATAGCAAAAGAAAAAAATGAAAAATTTAAAAAGATGAATAGCAAACA chr4 - 94230402 64904270 64904269 64904335 29326068 29326067 29326133 66 TCTTGCTTTGGTAATATTGACAGCAAGAAAAAAAAATAAAAAAAAGAGAGAGACAAATAGTAAACA .:..x:...:x.x.......:.....:.:........:.....xxx.:.:...::.....:..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% -4311034 -89919368 +3603 chr4 + 190214555 60611365 60611364 60611513 149 CAGCCTTTGTGACAAAATGGGATGCTGACAGAAAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAG chr4 - 94230402 5029055 5029054 5029189 89201214 89201213 89201348 135 CAGTGTTTTAGGAGAAATGGGATGTTAAGTG------------GAGACAGGAAGGAAGG--GCATGAAAAAAAAAAGGGAGAGAGGTCAACAAGAAAAGTACAGCTTAAAGGAAAAAAAGGAAAAGAAAAATAGCCAAAAGCATGAGAG ...:x...xx.:x:..........:.:.xx.------------....x..:...:...:--.x.x....:...:..:.:.:::.:.xx.:x......::x.x.:xxx........:....:.........:x.:xx.....x.x..:.. 31M12D16M2D88M 88/135 65.2% 135/94230402 0.0% 14/135 10.4% 55582310 NA +3399 chr4 + 190214555 60611384 60611383 60611518 135 GGATGCTGACAGAAAGA---AAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAGGCAAA chr4 - 94230402 61334664 61334663 61334801 32895602 32895601 32895739 138 GGATGTTAGCACAAATGTATAAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA .....:.::..x...x:---..:....x.x:x::.xx......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x..:...x.x...:..x..x.:.....:.x.:...::..::.x.:. 17M3I118M 82/135 60.7% 138/94230402 0.0% 3/135 2.2% -723280 -93507122 +3003 chr4 + 190214555 60611397 60611396 60611519 123 AAGAAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAGGCAAAT chr4 - 94230402 61334684 61334683 61334806 32895597 32895596 32895719 123 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGAT ...:...x.x:x::.xx......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::...:x.x...:.:x:.x..:...:..x..:..::..::::..:..:.. 123M 70/123 56.9% 123/94230402 0.0% 0/123 0.0% -723287 -93507115 +3194 chr4 + 190214555 60611424 60611423 60611513 90 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAGAAAG chr4 - 94230402 65573505 65573504 65573595 28656808 28656807 28656898 91 AAGGAATTTAGAAAGGAAACAGAAAACAAAGACAACAACGCACCAAAGCAGAGCAAATAAAGAAAGAAAAACTAAAAGAAAAAACACAAAG ...:..xxx......:..:x.::...x.....-..x..x.x.xx....x.:..x...x.......:.:...xx.........:.x.x.... 32M1I58M 64/90 71.1% 91/94230402 0.0% 1/90 1.1% -4962081 -89268321 +3276 chr4 + 190214555 60620927 60620926 60621007 81 TACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTTCAATGGT chr4 - 94230402 49036864 49036863 49036941 45193462 45193461 45193539 78 TAATTTTTTTTTTTGCTTTCTTTTTTTTTGTGGGAGTGGGATGGATTTTTATTATTGTT---TAGATGGAAGTTCGTTAGT ..x...........x:...:.........x..xx:...:..:...x...:.:.x.....---:..::x.:.....:x.:.. 59M3D19M 56/78 71.8% 78/94230402 0.0% 3/78 3.8% 11584063 NA +3145 chr4 + 190214555 60624160 60624159 60624206 47 GAATTGTTTTTTGTTTTTTGTTTTTCGTTTTTTTTTGTTTTTTTTTT chr4 - 94230402 61946759 61946758 61946805 32283598 32283597 32283644 47 GGGTTGTTTTTTGTTTTTGGTTTTTTGTTTTGTTGTGTTGTTTTTTT .::...............x......:.....x..x....x....... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% -1322599 -92907803 +3159 chr4 + 190214555 60642822 60642821 60642884 63 TCTCCTCCATTTATTTCAGTTCACAAAAGGCTTTTTTTCTCTCTCTTTTTTTTCTTTTTGCCT chr4 - 94230402 70081429 70081428 70081491 24148912 24148911 24148974 63 TCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCT ...::.::x...x:...x::.....x.:x.x...............:......:.....x... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -9438607 -84791795 +3174 chr4 + 190214555 60660997 60660996 60661095 99 CCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGAATTTCAATTATGCTTTTAAAAGAAGTGTTCTTTATAGTGTTGTTTAAATAGAAAA chr4 - 94230402 9288364 9288363 9288462 84941941 84941940 84942039 99 CCAATTCAAAGAGAAGAAATAAAAGCAAACATCTAAAAAAAAAATCTTCCATTGTGCTATTGAAAGAAAAATGTGCTGTGCTGCTGTTGGGAAAAAAAA ...x:.....:.:..:...x....:x...x.xxx:...:...:.x:...x...:....x..:......:x:.x:x:.:.:x..:....x::.x.:.... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 51372633 NA +3957 chr4 + 190214555 60672884 60672883 60673056 173 GAGAAGAGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAGGGAGGGAGGGGGGAGGGAAAGAAGGAAGGAAGGAAGGGCAATAAAAGGTTGAATATGTGATTAAATCCAATATGGGGGTAAATCAATGGTTAGACCTATTTGCTAATAAATTAATAATAATAATGAC chr4 - 94230402 40465776 40465775 40465939 53764464 53764463 53764627 164 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAA--CAATAC-------AAAAAGAGCCTAAAAACAATAGCTATTAAATTATTTATAGTTACGAC ......:..x.:x.:...x..:::....x.:::.:.x.:.::.:.:x.:.x.x..:............:.:.....::.::.::x..xx....x.....xx.:x:x.x...--.....:-------..xx.:x.x:..:.xx:.x.x....x.......x.x...:.x.:... 111M2D6M7D47M 101/164 61.6% 164/94230402 0.0% 9/164 5.5% 20207108 NA +3091 chr4 + 190214555 60691323 60691322 60691382 60 ACCAGGAAGAGACACAGAAACAACAACAACAACAACAAAAAAAAAAAAAAAAAAAAAACC chr4 - 94230402 18021887 18021886 18021946 76208457 76208456 76208516 60 ATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATC .:...:..:..:x.xx:..xx........................x.:::...:....:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 42669436 NA +3464 chr4 + 190214555 60691325 60691324 60691399 75 CAGGAAGAGACACAGAAACAACAACAACAACAACAAAAAAAAAAAAAAAAAAAAAACCTCAGGCCAATATCTTTG chr4 - 94230402 56474474 56474473 56474548 37755855 37755854 37755929 75 CAGGAATACACACAACCAGCCCAACAACAACAACAAAAAAAAAATGAACAAAAAAAGCCTGTGTTAAAATCTCTG ......x.x.....:xx.xxx.......................x:..x.......x.:::x.::..x....:.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 4216851 NA +3069 chr4 + 190214555 60691336 60691335 60691378 43 ACAGAAACAACAACAACAACAACAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 29762482 29762481 29762524 64467879 64467878 64467921 43 ATAGTGGCAACAACAACAACAACAGCAAAAAAAAAAAAAAAAA .:..x::.................:x................. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 30928854 NA +3117 chr4 + 190214555 60691341 60691340 60691375 35 AACAACAACAACAACAACAAAAAAAAAAAAAAAAA chr4 - 94230402 29762490 29762489 29762524 64467879 64467878 64467913 35 AACAACAACAACAACAGCAAAAAAAAAAAAAAAAA ................:.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 30928851 NA +3541 chr4 + 190214555 60705134 60705133 60705222 89 GCAGAATATATATATATA-------TATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACAC chr4 - 94230402 14964789 14964788 14964884 79265519 79265518 79265614 96 GCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.:.::..x......-------.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:.....:..xx........::............. 18M7I71M 60/89 67.4% 96/94230402 0.0% 7/89 7.9% 45740345 NA +3792 chr4 + 190214555 60705135 60705134 60705215 81 CAGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACA chr4 - 94230402 8395782 8395781 8395862 85834541 85834540 85834621 81 CAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:x:..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...::..............x..... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 52309353 NA +3127 chr4 + 190214555 60705138 60705137 60705224 87 AATATATATATATATA-------TATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACAC chr4 - 94230402 14964791 14964790 14964884 79265519 79265518 79265612 94 AAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x:.::..x......-------.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:...::...xx........::............. 16M7I71M 57/87 65.5% 94/94230402 0.0% 7/87 8.0% 45740347 NA +3098 chr4 + 190214555 60705139 60705138 60705220 82 ATATATATATA-----TATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACAC chr4 - 94230402 14964798 14964797 14964884 79265519 79265518 79265605 87 ATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x......x.-----.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......::xx........::............. 11M5I71M 55/82 67.1% 87/94230402 0.0% 5/82 6.1% 45740341 NA +3546 chr4 + 190214555 60705139 60705138 60705213 75 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:.::............x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 52309351 NA +3100 chr4 + 190214555 60705140 60705139 60705203 64 TATATATATATATATATATATATATATATATATATATATATATATATATATATATGCACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .:.:..:...:x.:......:..::.:.x......xx:.:.....:.:...:...x........ 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 23342100 NA +3808 chr4 + 190214555 60705143 60705142 60705217 75 ATATATATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx..:................x..... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 52309355 NA +3145 chr4 + 190214555 60705144 60705143 60705228 85 TATATATATATATATATAT-----ATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACACAC chr4 - 94230402 14964795 14964794 14964884 79265519 79265518 79265608 90 TGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::..x......x.x:.:.-----.:.:.x....:.x.:::.:.::.:.::.:....:.:.:...xx........::............. 19M5I66M 56/85 65.9% 90/94230402 0.0% 5/85 5.9% 45740349 NA +3686 chr4 + 190214555 60705145 60705144 60705219 75 ATATATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx::.................x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 52309357 NA +3826 chr4 + 190214555 60705147 60705146 60705221 75 ATATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 52309359 NA +3188 chr4 + 190214555 60705148 60705147 60705218 71 TATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 45740334 NA +3573 chr4 + 190214555 60705149 60705148 60705223 75 ATATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:::xx.:.................x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 52309361 NA +3704 chr4 + 190214555 60705151 60705150 60705225 75 ATATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x.:..:xx.:.................x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 52309363 NA +3693 chr4 + 190214555 60705153 60705152 60705227 75 ATATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:...::x:...:xx.:.................x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 52309365 NA +3966 chr4 + 190214555 60705155 60705154 60705229 75 ATATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:....:.....x:...:xx.:.................x..... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 52309367 NA +3659 chr4 + 190214555 60705157 60705156 60705234 78 ATATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACACACACACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.:...:.:.::...x.:..:...x..:....:.:::.x:...:xx.:.................x.....x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 52309369 NA +3722 chr4 + 190214555 60705159 60705158 60705233 75 ATATATATATATATATATATATATATATATATATATGCACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:.....:.::.x:...:xx.:.................x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 52309371 NA +3226 chr4 + 190214555 60705160 60705159 60705210 51 TATATATATATATATATATATATATATATATATATGCACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:.....:............. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -27442020 -66788382 +3124 chr4 + 190214555 60705176 60705175 60705238 63 TATATATATATATATATATGCACACACACACACACACACACACACACACACACACACATTTTC chr4 - 94230402 90815415 90815414 90815477 3414926 3414925 3414988 63 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTTTC .:...:..:.:.:::.xx..::......:...x.....::......:.x:.....x....... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% -30110239 -64120163 +3122 chr4 + 190214555 60705188 60705187 60705252 65 TATATATGCACACACACACACACACACACACACACACACACACACATTTTCTTTTTTTTGAGACA chr4 - 94230402 78588435 78588434 78588496 15641907 15641906 15641968 62 TATATATGCCTGTGGACACAGACATAGACACACACACATACACGCATT---TTTCTATTGAAACA .........x::::x.....x...:.x...........:....:....---...:.x....:... 48M3D14M 48/62 77.4% 62/94230402 0.0% 3/62 4.8% -17883247 -76347155 +3112 chr4 + 190214555 60717548 60717547 60717597 50 TTTTTAAAAAACATTTATGTATATATATGTGTGTGTGTGTATATATATAT chr4 - 94230402 26564522 26564521 26564571 67665832 67665831 67665881 50 TTTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ....x...xx.x:..x..x.......................:....... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 34153026 NA +3002 chr4 + 190214555 60717568 60717567 60717629 62 ATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACAT chr4 - 94230402 4481692 4481691 4481753 89748650 89748649 89748711 62 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .....x:.......:....:.:.x.:...:.:..x:.:.:..x.xx.:......:....... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 56235876 NA +3031 chr4 + 190214555 60717568 60717567 60717630 63 ATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATA chr4 - 94230402 14964821 14964820 14964883 79265520 79265519 79265582 63 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.x......x..:.....:.:.::.:...:...:..:.xx......:..::.:.:.....:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 45752747 NA +3049 chr4 + 190214555 60717568 60717567 60717644 77 ATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATACACATATA chr4 - 94230402 35554961 35554960 35555037 58675366 58675365 58675442 77 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACA ......x..x.........:.:....:x:.:...:....::..:...x.x..:.:..x.x..x:.x:.x..x...:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 25162607 NA +4468 chr4 + 190214555 60717568 60717567 60717683 116 ATATATATGTGTGTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATACACA------------TATATATGTGTGTATATATATGTGTATATATATACACATACAC chr4 - 94230402 25393253 25393252 25393380 68837023 68837022 68837150 128 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCACATGAAC ...x.x.......::.......:...:...x.:...:..........:.:::.:.:::x.x..:xx:x..x:.------------.:::.:........x:...:.:.....:...........:x.. 73M12I43M 79/116 68.1% 128/94230402 0.0% 12/116 10.3% 35324315 NA +4215 chr4 + 190214555 60717580 60717579 60717717 138 GTGTGTGTATATATATATATATGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATATATATGTGTATATATATACACATACACACACACACACACATACATATGATGGCTTTTTTTT chr4 - 94230402 73121101 73121100 73121228 21109175 21109174 21109302 128 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAA----------ATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTT .....::.::....x:...:.::........x.x::..:x:..:.:..:....x:.....:x:........x...:.....x----------....:.x:...x.x.......:::...x::.x:x.xx...x..... 82M10D46M 84/128 65.6% 128/94230402 0.0% 10/128 7.8% -12403521 -81826881 +3146 chr4 + 190214555 60717585 60717584 60717648 64 TGTATATAT----ATATATATGTATACACACACATATATATATACACATATATATACACATATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .........----......:.:....x...:....:x.:..:.:.x....:.:..::...:..:.... 9M4I55M 48/64 75.0% 68/94230402 0.0% 4/64 6.2% 12550547 NA +4055 chr4 + 190214555 60717591 60717590 60717674 84 TATATATATATGTATACACACACATATATATATACACATATATATACACATATATATGTGTGTATATATATGTGTATATATATA chr4 - 94230402 22514816 22514815 22514898 71715505 71715504 71715587 83 TATGTATCTATGTATACACAAACACAAAGATATGTACAAATGTTTGCAAGTACATATGCATGAatatatatatat-tatatata ...:...x............x...:.x.x....::...x..:.x.:..x:..:.....::..x........:.:.-........ 75M1D8M 63/83 75.9% 83/94230402 0.0% 1/83 1.2% 38202775 NA +3449 chr4 + 190214555 60717627 60717626 60717702 76 CATATATATACACATATATATGTGTGTATATATATGTGTATATATATACACATACACACACACACACACATACATA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:..::::.::...x:::.....x..:..:.....::x..:.:xx...................x...:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 52321840 NA +3121 chr4 + 190214555 60738783 60738782 60738837 55 TATTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGATTGATTTATTAT chr4 - 94230402 18982315 18982314 18982369 75248034 75248033 75248088 55 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTGAT .:.x..............x.................::.:::x..:x...:.x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 41756468 NA +3184 chr4 + 190214555 60738785 60738784 60738821 37 TTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982313 18982312 18982349 75248054 75248053 75248090 37 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA .:................x.................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 41756472 NA +3253 chr4 + 190214555 60738785 60738784 60738852 68 TTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGATTGATTTATTATGGAAAT-----TGGTTCACA chr4 - 94230402 81629062 81629061 81629132 12601271 12601270 12601341 71 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTA--CAGTATTTAAATATAAATGGCTCACA ............:.....x..................:x.x..x.--:.x...xx....-----...:..... 45M2D12M5I9M 55/66 83.3% 71/94230402 0.0% 7/66 10.6% -20890277 -73340125 +3125 chr4 + 190214555 60738787 60738786 60738820 34 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629066 81629065 81629099 12601304 12601303 12601337 34 TGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ........:......................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -20890279 -73340123 +3813 chr4 + 190214555 60738787 60738786 60738838 52 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGATTGATTTATTATG chr4 - 94230402 18982317 18982316 18982365 75248038 75248037 75248086 49 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG---GATTTATTTTG ..................................:...---........x.. 38M3D11M 47/49 95.9% 49/94230402 0.0% 3/49 6.1% 41756470 NA +3262 chr4 + 190214555 60754096 60754095 60754160 65 CTCCCGAGTTCAAGCGATTCTCCTGTCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGCCA chr4 - 94230402 18197139 18197138 18197201 76033202 76033201 76033264 63 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:.:.:.......:.x...x.xx.x........:..:.........:.:....--.:...:... 54M2D9M 48/63 76.2% 63/94230402 0.0% 2/63 3.2% 42556957 NA +4367 chr4 + 190214555 60784537 60784536 60784682 146 CTGTGCTAAA---TAGAGATCTGATTATAGAAGT---------AAGAGTCTTTGCCAA-AGTC---TCCATCAT------------TCTGTTATCAGTGATTGTGAGACATGCATCTCACTAAGAGACCTTAGTGTCATCTTCTAGCACTTGACCTTCAGTATTAGAAGCTTTA chr4 - 94230402 11681056 11681055 11681229 82549174 82549173 82549347 174 CTGTACTGAAACCTATGGATTTGATGGTAGAAGTCACTCCCCGGAGAATCTTTGCTAATGGTCACACCTATCATGTCAACTCAATATCTGTCAACAGTGACTGTGAGACATACATGTCAGCGGATGATCTCAGGATTAATCTCTGGCATTTAGCAATCACAGATAGAAGCTTCA ....:..:..---..x:...:....x:.......---------:...:.......:..-:...---:.:.....------------.....:.x......:..........:...x...x::::x..:..:..x:.:.x::...:...:..::.xx...xx:x.........:. 10M3I21M9I15M1I4M3I8M12I88M 103/146 70.5% 174/94230402 0.0% 28/146 19.2% 49103481 NA +3549 chr4 + 190214555 60823195 60823194 60823284 90 GTCCATCTGCCATGATGGCAATGTGCCCATTGAGAAAATACTCTGCCAGGTTTAGCTGGACAAAGGTACCAGTCAAAAAGGGA-TTAGAAA chr4 - 94230402 75464943 75464942 75465033 18765370 18765369 18765460 91 GCTCATCTGCTAGAATGGCATTATGCCCACTCAGAAGGTGCTATGCTAGTCTCAACAAAGCACAGGTGCCAACCAAATGTAGATTTAGAAA .::.......:.x:......x.:......:.x....::.:..x...:..x:.:.:.x:::..x....:...::....x:x:..-....... 83M1I7M 60/90 66.7% 91/94230402 0.0% 1/90 1.1% -14641748 -79588654 +3585 chr4 + 190214555 60865096 60865095 60865165 70 TTAGTCATTCTCATTCTC-TGTCTCTGCCTCTCTCTCTCTCTTTCTGCCTCTCTTTCTTTCTATCTCTCTT chr4 - 94230402 93177147 93177146 93177217 1053186 1053185 1053256 71 TTTGTCTGTCTCCTTCCCATGTCTTTGCCCCTCTCCCCCTTCCTCTGGATTTCTATCTTTCTATCTCTCTT ..x...xx....x...:.-.....:....:.....:.:..:::....xx.:...x................ 18M1I52M 54/70 77.1% 71/94230402 0.0% 1/70 1.4% -32312051 -61918351 +3498 chr4 + 190214555 60875254 60875253 60875330 77 TATATTTATTCATATATATATTTCATATATATATTTATTCATATATATTTCATATATATTTATTCATAT--------ATATTTCA chr4 - 94230402 19659964 19659963 19660048 74570355 74570354 74570439 85 TGTTTTTATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATATCCTATCATTCAGATAGGataagatatttca .:.x.....x:..........:.:x:.:......:....:......x........x:xx.:.....x..--------........ 69M8I8M 59/77 76.6% 85/94230402 0.0% 8/77 10.4% 41215290 NA +3193 chr4 + 190214555 60875275 60875274 60875333 59 TTCATATATATATTTATTCATATATATTTCATATATATTTATTCATATATATTTCATAT chr4 - 94230402 19659960 19659959 19660018 74570385 74570384 74570443 59 TTTCTGTTTTTATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATAT ..:x.:.x.x...x...x:......x.....:......:....:......x........ 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 41215315 NA +3838 chr4 + 190214555 60958699 60958698 60958810 112 ACCCTGCCTCTTTTATATACATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTATATATACAAGATATTATGTATAATATAATATACATTATATTATAT chr4 - 94230402 48089486 48089485 48089584 46140819 46140818 46140917 99 ACCTTGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-------TACACAAAATA------ATAGTGTAACATTTATTGCAATACAT ...:..x..::.x..x:.x::......:.:........:....x.x........:.:.....-------..:....:...------...:.:...:..x:...::.x..:.. 62M7D11M6D26M 71/99 71.7% 99/94230402 0.0% 13/99 13.1% 12869213 NA +3446 chr4 + 190214555 60958712 60958711 60958823 112 TATATACATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTAT----ATATACAAGATATTATGTATAATATAATATACATTATATTATATAGTATATATTATA chr4 - 94230402 19704285 19704284 19704396 74526007 74526006 74526118 112 TATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATATTTTCAGGAAAGTGTCCTCTAGGT----TTATACAGACTATATAATA .......:.......x.....:...x::..............x:.x.xx....x.----..x.....x..x..xx.x.x.:.:.xx.x..x:.----.....:..xx.....x... 55M4I34M4D19M 78/108 72.2% 112/94230402 0.0% 8/108 7.4% 41254427 NA +10050 chr4 + 190214555 60959943 60959942 60960376 434 AGTCCTTAAAAGG----------------ATATTGATTATTTACGGTAAAATAATCTTTAAAAAGTGTATTATGTTTTGCCAAATTACAATTTCTCCAGAGAAACCACCAGCTTCAGATACAGTAGCCTTTATCTATTATAAG---------AATG--GTTCCCTCTTTCCTCAGGACATTGGTATAAAAATAGTAACTCTGGTGAATTGTAAATAATGCAGTCAAATTATCTATATTAATAAATGGTGCTACGTGTGTGATTC---TCCTTTGCTTTCAGAAATT--GTTTGAAAACCCCAAATGTCACTTCAGCAGCCCGCTTGAAATTTTTCCCCTACAATGA------CACTGGGAATAATTAAGTTGTTAAAAGAAGATTCCTAACAAAGCAAAA-AACACAAAAC--------------------------------------TCGTTAGTATTTAAAGATC-AGAAAACATTTATAATTTAGAGAAAAAAAGGATAAAACATAAA chr4 - 94230402 44933911 44933910 44934407 49295996 49295995 49296492 497 AGTCCTTGAAAAGGCCATTTGAGCATACAATATTAATCATCTGCTGTGCAATAATCTTGGAAAAATGTAATATATTCTGGCAAATTGCAGGGCCCCCAGAGGAACCGCCTGCCTCTAAC-TAACGGCTCTCATCCATTATCAGGCAGCCACAAATGCAGCTCCCCACTTGCTTGCCCCATCAGCATGCAAACAGTGACTCAATTCAATTGTGAGAAATGGGAGGAAATGATCTGTATTAATAAATGGTGA-------GAGACTCAGATCGCCTGATTTCAGAAAATAAGATCAAAACTACTGA-----ACTTCATTGTCTCATCTGATACCTTCACTTCGCTGTAAATGCAGCACTGGGAGTAATTAAGCTTCTGAAAGAAGTTTCACCGTGAAGCCACATCACCCAAAACAATTAAGACAAACATTTTGTGCACATTGTCATCTGCCTTCATTAGTGTTTAAAGGTCAAGGAAACATT--TCATTAGGAAAAAAAAAGGGGGAGAGAAAAA .......:...:.----------------.....:..:..:.:.x..:x.........x:....:....x...:..:..x......:..:xx:.:......:....:..x..:..x:.:-:.:::..::.:...:.....x..---------....--.:....:x:..x..::xxx...::.:..:x...:...:....x:x.x......:.:x....x::xx....x....:...............x-------.x..:..---..x::..x.........x.--.x.::...x:x.::.-----......x::x.:.:::...x.::..:x.::::.x:.:.------........:........:.x:.:.......x...x:x:::....x.x.-x..x......--------------------------------------..:.....:.......:..-..:.......--.x...x:..:.........:x:.:.x.x... 13M16I90M1D23M9I4M2I92M7D7M3I19M2I15M5D38M6I48M1I10M38I19M1I10M2D31M 284/419 67.8% 497/94230402 0.0% 93/419 22.2% 16026032 NA +3178 chr4 + 190214555 60978120 60978119 60978206 87 AAAATTCCCTTTTACTTCCTATCTACAAAAAAAAAAAAAAAAACAAGAACTGAAAAAGTTTCTCCTCAT-----TTTTTTTTAATTAAAAAA chr4 - 94230402 88525833 88525832 88525924 5704479 5704478 5704570 92 AAGCTTCCCCCTCTCTTCTGATCTACAAAAGAAAAAAAAAAAACAACAAAAAACAATGTTCATCTTGATAAGAATTTTCTATAGTGCTAAAA ..:x.....::.:x....:x..........:...............x..xx:.x..x...:x..:.x..-----....:.x..:.xxx.... 69M5I18M 62/87 71.3% 92/94230402 0.0% 5/87 5.7% -27547713 -66682689 +3038 chr4 + 190214555 60979385 60979384 60979452 68 TCATATGTATGCATATATATGTATATGCATATACATATATATGCATACATATATACGCATACATGTAT chr4 - 94230402 48167037 48167036 48167104 46063299 46063298 46063366 68 TTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .::...:...xxx:............:x.:......:x.:...:::x....:.:.:.:.:........ 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 12812348 NA +3499 chr4 + 190214555 60979386 60979385 60979464 79 CATATGTATGCATATATATGTATATGCATATACATATATATGCATACATATATACGCATACATGTATACATATACATAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:...:.:::.:.::..:x.:...:..x.......:.....x.....xx....:..:...:::.:...x.:...x.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 52583599 NA +3161 chr4 + 190214555 60979415 60979414 60979482 68 ATACATATATATGCATACATATATACGCATACATGTATACATATACATATATGCATATACATGCACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....x..::..:..x.::.......:..::..........x.:.:...:x.:.::.::..:..x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 53383002 NA +3127 chr4 + 190214555 60979425 60979424 60979488 64 ATGCATACATATATACGCATACATGTATACATATACATATATGCATATACATGCACATGCATAC chr4 - 94230402 19637122 19637121 19637185 74593218 74593217 74593281 64 ATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATAC ...x...x..::...::x..xx..:.........x:..x.......:.x:.....:........ 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 41342303 NA +3632 chr4 + 190214555 60979432 60979431 60979529 98 CATATATACGCATACATGTATACATATACATATATGCATA--TACATGCACATGCATACATGTGTATATATGCATACATATACATGC----------ATACATGTGTATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:.::.:.....:x::..:.........:.x.x....:--.....:.::..:x:....:.x......:..x:........x..:.----------.:...::...... 40M2I45M10I13M 68/98 69.4% 110/94230402 0.0% 12/98 12.2% -12141668 -82088734 +3386 chr4 + 190214555 60979453 60979452 60979524 72 ACATATACATATATGCATATACATGCACATGCATACATGTGTATATATGCATACATATACATGCATACATGT chr4 - 94230402 38535895 38535894 38535966 55694437 55694436 55694508 72 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT .:.......:.::.:...:x:x..:.....:..:..........:..........x:x...x.x::.:x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 22443558 NA +3141 chr4 + 190214555 61010827 61010826 61010901 75 TTCAGCATGCTACTTAAAAATAGATTTTCCCTTAGAAAATCTCATTACATTTTTCAACTAAAGTAACTTTGTTCT chr4 - 94230402 20166596 20166595 20166670 74063733 74063732 74063807 75 TTTAATCTCCTATTTAAAAATAGATTTTACTTCTAAATATAGCATTAGATTTTAAATATAAAGCAATTTTGTTTT ..:.::x.x...:...............x.:.:x:..x..xx.....x.....xx.xx.....:..:......:. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 40844231 NA +3835 chr4 + 190214555 61062117 61062116 61062325 209 GGAGGCAGAGAGAGAGAGAGAGGGAGACAGAGAGAGAGAGGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG----GAAGGAAGG---AAGGAAGGAAG------------GAAGGAGGGAAGGAA-----GGAAGGGGAAGGGAAGGGA--AAAGGGAAGGGAAGGGAAGGAGGGAGGGAGGGAGGGAGGGAATGAAGGAAGGAAGGAAGGACGGGAGGGAGGGAGGGAAGGA chr4 - 94230402 93521796 93521795 93522030 708373 708372 708607 235 GAGGATGGAAAGGCAGATGGGGAAAGGCAGATGGGGAGAGGGGAGGAGGGAAGGCAGGGAGGGTAAAACACAGTCCTGGGTGACGGGCTAAGTCTGGAAGAGCAAGCATCTTGAAGGAAGAAAGTAACAACCAGAAACAGCAGAAAAAGGATGAAATGTGACAGAAAAGTTGGCCTGAGGGAAATAACGGGAGCTAAAAATAAGCATCCAAGGGCTGCAATGGGGGAGAGAAGGA .::.:::..:..:x...x:.:.::..:....x:.:............:......x...:...:x::..x:x..----.::x..x..---...xxx.....------------......:.:...x..-----:...:x:.x..::..:...--...x.x:.x:...::.xx..xxx......::x.:x.:.:.xxx:..:x...x.xxx....:.x.x.:x.:.....:...... 73M4I9M3I11M12I15M5I19M2I82M 128/209 61.2% 235/94230402 0.0% 26/209 12.4% -32459679 -61770723 +3204 chr4 + 190214555 61073704 61073703 61073773 70 TTTTCTTTCCAGTAGTTTTCTTTTCTTTTTTCCTTTCTTTCCAGTAGTTTTCAGGGCATCACATTCTCTT chr4 - 94230402 72231872 72231871 72231941 21998462 21998461 21998531 70 TTTTCTTTCCAGCAAATTTCTGTTCTTTCTCCTTCTTTGGTCAGAAGCATTTAGAATGGCACATTCTTTT ............:.:x.....x......:.:.:.:.:.xx:...x..:x..:..::::x........:.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% -11158168 -83072234 +3916 chr4 + 190214555 61145427 61145426 61145545 119 TGACCAACAATCATTA--CAGCTTGATGTCTGTTCAGTGGCTGGAATGAAATGAATTGGT---CTCAGTCCAATTCCTAGTGGACAAGTGTCTAAATCAAAAAACACCACCACAATTAACATTA chr4 - 94230402 49300632 49300631 49300752 44929651 44929650 44929771 121 TAAGCAGCCTTCATTATCCAATCAGAAGCCTGTTT-GTGGC--ACATGAAATAACTTGGTGGTCTTAGTCCAATTCCAACTGGACAGCTGTTTGGACCATAAAACTCTACCATAATTGGCTTTA .:.x..:.xx......--..:::x..x.:.....:-.....--:x.......:.x.....---..:...........x.x......:x...:.::.:..x.....x.:....:....::.x... 16M2I17M1D5M2D17M3I61M 84/116 72.4% 121/94230402 0.0% 8/116 6.9% 11844795 NA +3189 chr4 + 190214555 61156663 61156662 61156786 124 TAACATTTTGAAAAGCCTTTATAGTCATGTAGAT-GTAAGGTAAATACCAAAAAAAAAAAAAAAAAAAAAGACTCCATCTTTCTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTCTGAGATGAA chr4 - 94230402 86453131 86453130 86453240 7777163 7777162 7777272 110 TAACATGTTG------CCATACAG-CATGTATACCACAGAGTAAATTTCAGGTAAAAAAAAAAAAAAATTGAA--------CTTCTCTTATGTTTCTTCTTCTTTTTTTTTTTTTCCAAAAAAAA ......x...------.:x..:..-......x.:-::.::......x:..::x...............xx..x--------::.:.:..x.x...:.....:..............::.:.x:.. 10M6D8M1D9M1I38M8D44M 78/109 71.6% 110/94230402 0.0% 16/109 14.7% -25296468 -68933934 +3320 chr4 + 190214555 61156712 61156711 61156771 60 AAAAAAAAAAAAAAAAAAAAGACTCCATCTTTCTTTTTTCTTTTTTTTCTTTTTTTTTTT chr4 - 94230402 93378612 93378611 93378665 851738 851737 851791 54 AAAAAAAAAAAGAAAAAAAAAACTCC------CTTTTTTCTCTTTCTTCCCCTTTTTATT ...........:........:.....------.........:...:...:::.....x.. 26M6D28M 46/54 85.2% 54/94230402 0.0% 6/54 11.1% -32221900 -62008502 +3533 chr4 + 190214555 61280185 61280184 61280258 74 CTGCAACCTCCACCTTCCAGGTCCAAGCGATTCTCCTGACTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x....::...:....:.x...x.xx.:........::::.........:......x.x.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 43083059 NA +3158 chr4 + 190214555 61318172 61318171 61318263 92 TGATAGAGTGAGAACCTGTCT-CAAAAAAAAAAAAAAAAAAAAACACAAAACACACACACACACACACACAAAAGAAAATATATAGGATAATA chr4 - 94230402 25075174 25075173 25075266 69155137 69155136 69155229 93 TAATAAAAAGACAGTTTAACTGCAAAAAAAAAAAAAAAAAAACACCCATCCAACACAAAAGCAAACAAACAAAAACAATCAAACAGTATAATA .:...:.:x..x.:::.:x..-....................x..x..xxxx.....x.x:..x...x......:x..x:.x.:..x...... 21M1I71M 64/92 69.6% 93/94230402 0.0% 1/92 1.1% 36242998 NA +3014 chr4 + 190214555 61318185 61318184 61318245 61 ACCTGTCTCAAAAAAAAAAAAAAAAAAAAACACAAAACACACACACACACACACACAAAAG chr4 - 94230402 11261206 11261205 11261266 82969137 82969136 82969197 61 ACCTAGCACAAAAGGGGGAAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAG ....:x.x.....:::::.......::.....x......x.x...x...x...x....... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 50056979 NA +3088 chr4 + 190214555 61318190 61318189 61318229 40 TCTCAAAAAAAAAAAAAAAAAAAAACACAAAACACACACA chr4 - 94230402 68107315 68107314 68107354 26123049 26123048 26123088 40 TCTCAAAAAAAAAACAAAAAAAAACAACAAAACACACACA ..............x.........xx.............. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -6789125 -87441277 +3439 chr4 + 190214555 61338392 61338391 61338444 53 TCTGTGTGTGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAAGA--GATTGATTT chr4 - 94230402 18982309 18982308 18982363 75248040 75248039 75248094 55 tctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTT ...x.x..................x..:.............:..--....x.... 44M2I9M 47/53 88.7% 55/94230402 0.0% 2/53 3.8% 42356083 NA +3549 chr4 + 190214555 61338392 61338391 61338449 58 TCTGTGTGTGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAAGAGATTGATTTGATTT chr4 - 94230402 18982307 18982306 18982364 75248039 75248038 75248096 58 tctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTT ...x.x.x...................:.............:::..xx.....:x... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 42356085 NA +7868 chr4 + 190214555 61356589 61356588 61356874 286 AACACATGTCATTCCATGGAGTATTTGACAAGGTCATTG-CATCAAATAGCTTCTTGAATTTTTGCTTCTTAATTTTATTTGCTTGGTTTGA-------TTTAAATTAAAAACAAACATAAAAATTTTCCTTGCAGTTACTTATCATAAACAAAATGGCTTGGAAATACAGTTTATCATTTATCATAGAAAGGACAAAGATAAGTGTTAAAAAAACAACCCACTAAAATAACCATGACTGCAAAGTCCT--GGCCTTAAAGGTTCTGTTTCTTTTTGTTTGACACAACTAGTCAAA chr4 - 94230402 44796436 44796435 44796717 49433686 49433685 49433967 282 AACACAGATCTTCTC--TGTGTATTTGAGAAGGTCACTGATTTTCAACAACTT----AATTCTTTTTTCTAAATTTT-CTCGCTTGGTTTCACACTACATTTTCTTAAAAGGTAAACGATAAAGTTTTGTTTGCAGTTAGCCAGCATAAACAAATCATCTCTCAAATACTCACTACAATTTTTCACAGAAAGGACAAGAATAAGTGTT---ATAATAACTTGCTTAAATATCCGTGACAGAAGAGTCCTTCTGCTGCAAAGCTGCTG----CTTGCATTTGACACACCTGAGCAAA ......x:..x.::.--x.x........x.......:..-:x.:x..:.:...----....:..x:....x......-:.:.........x.-------...xxx.x...:::....:xx...:....x:.........x::.x..........x::x..:xx......xxx:..:x....x...:...........::.........---.x..:...:::..x.....x..:....x.x.:......--x..:x:....x.x...----:..x::.........x..::x.... 15M2D22M1I13M4D20M1D14M7I109M3D38M2I16M4D25M 191/272 70.2% 282/94230402 0.0% 24/272 8.8% 16560153 NA +3077 chr4 + 190214555 61432555 61432554 61432640 86 ATTTCTTTTCTTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570556 41570555 41570641 52659762 52659761 52659847 86 ATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ....x..x..:....x:.::...:...............xx..:x:x.xx:::x...:::....:.xxx............xx... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 19861999 NA +3043 chr4 + 190214555 61432557 61432556 61432661 105 TTCTTTTCTTTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTT chr4 - 94230402 19053884 19053883 19053988 75176415 75176414 75176519 105 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCT ...:..:...x::.:..x..xx......:x..:..:.:......xx...:.x::.:::::.:...:.....:.x:...x.x..:.x..:x:.xx..x...x..:. 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 42378673 NA +3040 chr4 + 190214555 61447913 61447912 61447993 81 ATTTCCAAACAACAACAAAAACAACAACAAAATACGGACCTGGGCCTGAACCTAGGTTAATACTGGCAGTGCTGCCTATAG chr4 - 94230402 82310992 82310991 82311072 11919331 11919330 11919411 81 ATCCCAGAACAGCTACAAAAACAACAATAACACATGGACCTGCCCATGAAGCCAGGGTATTCCTTTTGGCCCTGGCTGCAG ..::.x:....:.x.............:..x.:.:.......xx.x....x.:...x..x.x..xx::.:x...x..::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -20863079 -73367323 +3292 chr4 + 190214555 61448799 61448798 61448891 93 GGAGGAAGGGAGGGAAGGAAGGAAGGAAGAAGGGAGGGAGGGAAGGAAGGGAAGGAAGGGAGGGAAGGAAGGAAGGAAAGGAAGGAAGGAAGA chr4 - 94230402 40465775 40465774 40465867 53764536 53764535 53764628 93 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAA ....:.:..:x.:x...:.x.::.::.:.x..:..:.x.:..::::.x...x:x.:..........:..:.:.....:...::::..:.x.:. 93M 55/93 59.1% 93/94230402 0.0% 0/93 0.0% 20983024 NA +3011 chr4 + 190214555 61467473 61467472 61467507 35 TGGGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..x.......:........................ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -20161591 -74068811 +3501 chr4 + 190214555 61467473 61467472 61467513 41 TGGGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGATGAAGG chr4 - 94230402 18982315 18982314 18982355 75248048 75248047 75248088 41 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ..x................................x..... 41M 39/41 95.1% 41/94230402 0.0% 0/41 0.0% 42485158 NA +3207 chr4 + 190214555 61499997 61499996 61500050 54 CACACACACACACACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:......xx.x.x.:...x...................:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -6152087 -88078315 +3037 chr4 + 190214555 61499999 61499998 61500052 54 CACACACACACACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:.:.:..xx.x.:...x.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -6152085 -88078317 +3373 chr4 + 190214555 61500001 61500000 61500054 54 CACACACACACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x.......:..xx.:...x.:.:...................:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -6152083 -88078319 +3203 chr4 + 190214555 61500003 61500002 61500056 54 CACACACACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x.:.:...:..x:...x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -6152081 -88078321 +3120 chr4 + 190214555 61500005 61500004 61500058 54 CACACACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx..x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% -6152079 -88078323 +3359 chr4 + 190214555 61500009 61500008 61500075 67 CACACATACACACACAGAAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATCTCCAAG chr4 - 94230402 67652084 67652083 67652150 26578253 26578252 26578319 67 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATTGCCAAG .....:....x...:.x.x..x:.:.:.:.:.:...................:.xx.x..:x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -6152075 -88078327 +3108 chr4 + 190214555 61517493 61517492 61517566 74 CCAAGGAGC---ACAGATTGCAGCGCAAGGTGCGGCCAGCGGTGGGGAGAGAGGGCTGGGGGTGGCTGGGCAGGGGC chr4 - 94230402 82685116 82685115 82685192 11545211 11545210 11545287 77 CCATGGAGTGGGACCAAGCGCACCTCGATCTGCAGGTAGAGGTGAGGAGAGAGGGATGGGAGATGCTGGGCAGGGGC ...x....:---..x:.x:...x.x.:.xx...:.x:..x....:..........x....:.xx............. 9M3I65M 54/74 73.0% 77/94230402 0.0% 3/74 4.1% -21167623 -73062779 +3059 chr4 + 190214555 61538419 61538418 61538457 39 GGAGTTTTTTATTGTTGTTGTTTGTTTGTTTTTTTGTTG chr4 - 94230402 79423443 79423442 79423481 14806922 14806921 14806960 39 GGGGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTAGCTG ..:.......:.......................x.:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% -17885024 -76345378 +3015 chr4 + 190214555 61541824 61541823 61541870 47 TATATATGTGTGTGTGTATACACACACACACACACACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::.:.:....:...:......xx........::............. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 46576986 NA +3531 chr4 + 190214555 61545589 61545588 61545662 74 CTGCAACCTCCGCCTGCCGAGTTCAAGTGATTCTCCGGCCTCAGCTTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..x.:.:.........x...x.x..x......:.::::.........:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 43348463 NA +3342 chr4 + 190214555 61554269 61554268 61554352 84 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGTCTCAGCCTCCAGATTAGCTGGGATTACAGGCGCGTGCCACCACGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:..:..:xx.x..:.::..........x...x..x.x........::x:.x.......:.:....--..:.::....:::.. 67M2D15M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 43357143 NA +17352 chr4 + 190214555 61557288 61557287 61557795 508 ATACTTCATCCTTAAATAGCAGGAACACTCATACA-AACATATAATCTAAAACAAATTTCCTTTATGAACCTATAATAGATGGATGGTTCAGTTGTTTTTATTACAAATACATCATTGATTCACAG-----------ACCTCAGGCACCAGGAATTGCTGGAATCCATAGACTCACTATGTAGTTTTAGTAAAAATA-AAGCAGTAAAAGTCTATAACCCATTTATTATCAATGTGTACCCTCTAAA----TAAATGGGCATTTTAATGATGGCACTGCCTATTCCAGTGGATAGAGCTGCCTTACAGTGGCATTTATAAG---TCATTACTAATGTAAAATTGTACAGCAGG-----CTGACTGCCTTTCAC---TCTTTAATGCTAAAGTGCTTTAGGTCTCCAGAGTTGCAATTAATAAGAGCACTCAAACACTAACCTTAGGAATTCCTCACAGGGTGTGCACTCTTTAGTGAGAAAGTATATACTTTGGCTATTTTGCTCTGAATCATTGATCAGGGTTTCAGTGTTTTTT chr4 - 94230402 44665604 44665603 44666125 49564278 49564277 49564799 522 ATACTTCATCTTTAAATAGCAGCAATCAATACACACAGTATATAACCTAAA-CAAATTTCTATTATGAATGCTTAATGGATATATGCTTTGGTCATTTTTATTACTAATATAGTATTGATTTACAGAATACATTACCACCTTAGGCACTGGGATCTGCTGGAGTCCTTGGACCCTGCATAGCATTTTAGTCAAAACAGGAGC--TGAAAGTCAATAACCCATTTACCACCAGAGCAGACCCTCTACGGCGTTAA---GATATTTTAATGACAGT-CTGATTCTCACAGAGCAATCATTTGTCTTACAGTGGCATTTATAAGTCATCATTATTAATGTAAAGTTATCCATGAGGTTTGTCTGCTTATCTTTCACACTTCTTTATTGCCAAAATGCTTTAG-------GAGTCGCAGCAAGGAGGAGCACTTGCAGCCTAACCTTGCAGAACCCTCACTGGGCAGGGGTGCCGTGAAATCAAAGCATCCACTTGGACTCTTTTGCTCTGAATCAATGAGCAGTTTCTCTGCCTTTGTT ..........:...........x..:xxx:.:...-.::......:.....-........:x.......:x:x....:...:x...x..::..::..........x....:.x:.......:....-----------....:......::...x:.......:...x.:...:.xx:..:xx:.......x....:.-:...--.:......x............::.:..:x.::x........x:----...---.::..........::.:-...x:.x.:x...x.x.xxx.x:..:....................---......:.........:..:.x..xx...-----...x:.::.......---......x...:...:........-------....:...::x.:x.:.......::x.xx........:x::.x:......x...::x.x::x.:x.::x:xx....:..x:....x.:..x...............x...x...xx.:..x.:x...x.. 35M1I15M1D74M11I60M1I4M2D43M4I3M3D17M1D46M3I29M5I15M3I23M7D130M 353/494 71.5% 522/94230402 0.0% 42/494 8.5% 16891684 NA +3194 chr4 + 190214555 61564332 61564331 61564423 92 TGGCATAATTACAGTTCATTGCAGCCTCGAATTTCCAGACTCAAGAGATCCTCCCACCTCAGCCTCCTTAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCAT----GTTC--TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......x..----....--.:.....:x:.::...::.::.....x.x.:.x.xx:x........:::x.........:......x...... 9M4D4M2D73M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 43367218 NA +3096 chr4 + 190214555 61593349 61593348 61593446 98 TTTTTTTGTTGTTGTTTGTTTGTTTCTTCTTTTCTTGTTTTGTTTTTTTCCTTCAGGTGATTTCTTATTGCTCATTAACATCTTTTTTATTTCTGATT chr4 - 94230402 45023729 45023728 45023825 49206578 49206577 49206674 97 TTTTGTTGTCGTTGTTTGGTTGTTTGCTTTTGTGTGTTTTTTTTTTTTTTCTTCCTAAAGTTTATAACATTTCATTTA-ATTCTTCTCATTTTCGTTT ....x....:........x......x:.:..x.x.xx....x.......:....xx:x::...x.x.:xx:.....x.-..::..:.:....::.x.. 78M1D19M 65/97 67.0% 97/94230402 0.0% 1/97 1.0% 16569620 NA +3200 chr4 + 190214555 61626065 61626064 61626140 76 TTTGACCTTAAAATCAAATTAGAAAACCCCGGATAAAAATATTAAGTCATTTCTCACTTTAAAATCTACAAAAAAA chr4 - 94230402 65071915 65071914 65071990 29158413 29158412 29158488 76 TTTCACCTTAAAATGAAATTGAAATACATGAGATAAAAGTATTTCAGTATCTTTCTCTGTAAATTCTACAGAGGAA ...x..........x.....::..x..x:x:.......:....xx:x:..:.:..x..x....x......:.::.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -3445850 -90784552 +3037 chr4 + 190214555 61629687 61629686 61629767 81 AGCCTAGGCGACAATGCAAGACTCCGTCTCGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT chr4 - 94230402 66946910 66946909 66946990 27283413 27283412 27283493 81 AACTCAAGTGACAATGCAACAACCTAATAAGTAACAAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAAT .:.::.:.:..........x.x:.::x:xx.x::...:x....x:...x.x........:...:........:.::.:... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% -5317223 -88913179 +3371 chr4 + 190214555 61694122 61694121 61694217 96 CCATTATATTATATCATGCTATTTT----TCTGTCCTATACTATTTTAAAATTTTGTCATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 20788920 20788919 20789019 73441384 73441383 73441483 100 CTGTCATATTTCTTTTTACTATTTTCTTTTCTAGCCTAAACTATGTTTAAAATTTAAAAGTTCCTGTTTTTTTTTTTGTTTGTTTGTTTTGCTTTTTTTT .::.:.....x:x.:x.:.......----...:x....x.....x..x...x...:xx.x.x::.x...........x...x...x....x:........ 25M4I71M 68/96 70.8% 100/94230402 0.0% 4/96 4.2% 40905202 NA +3151 chr4 + 190214555 61698428 61698427 61698497 70 GGTGACAGTGAGACTCCATCTCAAACAAACAACAAC--AACAACAACAACAACAAAAACAAATACAAAAATA chr4 - 94230402 20245441 20245440 20245510 73984893 73984892 73984962 70 GGTCATGGTAAGCCTCCATCTAAAATAAACAACAACCAAACAAAAACA--AACAAAACCACAGACCAAAACA ...x.::..:..x........x...:..........--.....x....--.......x..x.x..x....:. 36M2I10M2D22M 55/68 80.9% 70/94230402 0.0% 4/68 5.9% 41452987 NA +3249 chr4 + 190214555 61699843 61699842 61699999 157 TGAAAGTTGCTTAACTTGGAAAAAAAGTACTATGGATAAACTATGCTTATAAGAAGTTACAGCCTAGTAGGAAAATTCAGATCTGTGATCAAATAACAAGGAGATACACAC--ACACACACACACACAAAAACACACACAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 67651981 67651980 67652136 26578267 26578266 26578422 156 TAAAAGGTTTTACACTTTGAATACGAGCA---TAAACAAACTTTGCTCACTGTGATATGAAGACCAGTATGTTTACTTACTGCACCAAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .:....x.x:.xx....x...x.x:..:.---.::.:.....x....:.:x:x:.xx.:x..x.:....x.xxx.:.:.xxx.xx::.xx...xx.x.:...:x.x.....--...x...:...:..x....x.x.x.x.................... 29M3D79M2I46M 97/154 63.0% 156/94230402 0.0% 5/154 3.2% -5952138 -88278264 +3158 chr4 + 190214555 61711446 61711445 61711512 67 ACATATGCTTCATTATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::.:...x.x.x:..:...x..:....:...::x..:..xx...:...............x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 53315650 NA +3278 chr4 + 190214555 61711460 61711459 61711532 73 ATATATATATATATATATATATATATATATATACACACACACACACACACACACAATAGCATGATTGTAGAAC chr4 - 94230402 8395808 8395807 8395876 85834527 85834526 85834595 69 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA----ATGAATAAAAAAC .:..:...x..:....:...::x..:..xx...................x......----....x.:x.:... 56M4D13M 53/69 76.8% 69/94230402 0.0% 4/69 5.8% 53315652 NA +3709 chr4 + 190214555 61719666 61719665 61719759 94 TGCTTGGC-TCA----CTGCAACCTCCGCCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGCCCACCACTACG chr4 - 94230402 18197110 18197109 18197206 76033197 76033196 76033293 97 TGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ........-...----..:..:..:xx:x..:.::.:........x...x.xx.x........::::................x...--.......::. 8M1I3M4I71M2D10M 69/92 75.0% 97/94230402 0.0% 7/92 7.6% 43522556 NA +3212 chr4 + 190214555 61775377 61775376 61775432 56 CTAAAATTTTCTTTTTTTTCTTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 28563575 28563574 28563630 65666773 65666772 65666828 56 CTAAACTTTTTTTTTCCTCCTTTTCTTGTGTTTGTTTTTGTGTGTGTGCATGGGTG .....x....:....::.:....::......x...x.x..........::..x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 33211802 NA +3021 chr4 + 190214555 61775381 61775380 61775424 44 AATTTTCTTTTTTTTCTTTCTTTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 16400264 16400263 16400307 77830096 77830095 77830139 44 AATTTAATTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTG .....xx.........:..:...x.x.................. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 45375117 NA +3158 chr4 + 190214555 61775384 61775383 61775426 43 TTTCTTTTTTTTCTTTCTTTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804591 23804590 23804633 70425770 70425769 70425812 43 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG ...:......:.:...:..........:.........::.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 37970793 NA +3206 chr4 + 190214555 61775386 61775385 61775428 43 TCTTTTTTTTCTTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804591 23804590 23804633 70425770 70425769 70425812 43 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG .:............:...x........:.........::.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 37970795 NA +3112 chr4 + 190214555 61781319 61781318 61781379 61 AAATTCTGCCTCCAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAAGAAAGTGTT chr4 - 94230402 37024462 37024461 37024522 57205881 57205880 57205941 61 AAATTATAACCTGAATTTAAAAAAAAAAATGAAAGAAAAGAAAAAGAAACACGAAAATGTT .....x.:x.::x..xxx...........x:..................x.x....:.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 24756857 NA +7008 chr4 + 190214555 61782360 61782359 61782541 182 AAAAAATTTTATGACGGTACTGTAGCTTAGCAGCATTGCTTATGGTAATGAAGAAGTTAATTAGCAATATTGAGCAAGACTTTAAGACATGAGTTTTAATAAGTAGTGCTAAAAATATTACAGTAGTCATCCACAG-ATAAACATAATAAACCTCAGACAAATGGGGAAA---ATGGTCAAATTAT chr4 - 94230402 44554696 44554695 44554872 49675531 49675530 49675707 177 AAAAGCTGGCATGGCAGCACTGCAG------AGCACTG---GCAGCATCGAAGAAGTTAATTAGAAATGTTGAACAAGGCTTCAAGAGACGAGTCTTAATAAGTGGCGCTAAAAATATTACAGTATTCATTTTCAGAACAAACACAATCAGTGGCAGACATGCAAAGAGAGCCATGGTGGAGGTAT ....:x.xx:...:.:.:....:..------....:..---:::.:.x:...............x...:....:....:...:....x.:....:.........:.:..................x....::x...-.:.....:...x.::xx......x:::::..:.---.....x:.:x... 25M6D7M3D95M1I33M3I13M 125/173 72.3% 177/94230402 0.0% 13/173 7.5% 17227664 NA +3104 chr4 + 190214555 61810970 61810969 61811005 36 TCAAAAACAAACAAACAAACAAAAACCTCAAAATGT chr4 - 94230402 46805580 46805579 46805615 47424788 47424787 47424823 36 TTAAAAACAAACGAACAAACAAAAACCTCAAAATGT .:..........:....................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 15005390 NA +3006 chr4 + 190214555 61821313 61821312 61821363 51 AATATAGTGAACTACTTTTTATTTATTTATTTATTTATTTATTTGTTTATT chr4 - 94230402 66350747 66350746 66350797 27879606 27879605 27879656 51 AACATAGTGTACTACTTTCTATACATTATCTGATTTATTTATTTATTTATT ..:......x........:...x:...xx:.x............:...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -4529434 -89700968 +3155 chr4 + 190214555 61831381 61831380 61831451 71 ATGAAGATGAAGAAAGGAAAAGATGCTAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGCTAA chr4 - 94230402 34134877 34134876 34134947 60095456 60095455 60095526 71 ATGAACATTTAGAAAGTAAAAATTGCATCCAAAAAAAAAAAAGATAAAAAAAAAGTAGAAATAAATGCTAA .....x..xx......x....:x...xxxxx...........:.x.........:x.:...x.:....... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 27696504 NA +3002 chr4 + 190214555 61844557 61844556 61844598 42 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATT chr4 - 94230402 69437739 69437738 69437780 24792623 24792622 24792664 42 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTT .........x........xx...................x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% -7593182 -86637220 +3077 chr4 + 190214555 61844559 61844558 61844599 41 AAAAAAAAAAAAAAAAAATATATATATATATATATATATTT chr4 - 94230402 69437739 69437738 69437779 24792624 24792623 24792664 41 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT .........x........:x...................:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -7593180 -86637222 +3149 chr4 + 190214555 61846940 61846939 61846995 56 TATATATTATGTGTGTGTGTGTGTGTGTGTGTATATATATGTATATATGTATATAT chr4 - 94230402 43600815 43600814 43600870 50629533 50629532 50629588 56 TAAACACCATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT ..x.:.::....x.....:.x.:::..........:....x......x........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 18246125 NA +3051 chr4 + 190214555 61852982 61852981 61853035 54 TTCTTTCCATGCTTGTTTTTTGTTGGTTGGTTGGTTGGTTTTGTTTTGTTTTTT chr4 - 94230402 87951235 87951234 87951288 6279115 6279114 6279168 54 TCCTCTCTGCGTTGGTTTTTGGTTGGTTGGTTGGTTGTTTTTTTTTATTTTTTT .:..:..:::.:.x......x................x....x...xx...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -26098253 -68132149 +5709 chr4 + 190214555 61856267 61856266 61856479 213 ATTTCTTTCTTTCCTTCTTTCTCTTATTTCCTTCCTTCCATTCTTTATTTCCCTTCCTTTCTCCCTCTCTCCCTCCCTCCCTTCTTCTTTCCTTCTTCCCTT---------------------CCTTCCTTCCTTCTTCCTTCCTTTCTTG--------------------------------GAACTTGGAACTGTGTCTGAGAATTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTT chr4 - 94230402 90656103 90656102 90656368 3574035 3574034 3574300 266 AtttctttccctttttgctttctttctttccctctttctttccttctttttcttctttttctttttctttttcttcttcttcttttttttttttttttttttGGACCCTCATTAAGGCATGCGCATTTGTTCCTCCTTGCCACCGCACTGGAGTCTGCCTAGAAACAAAGAGCAGAGCCTGGCGAAGTTGGGGCTGCCTCGGGAAGTGGCTGCCTTCTTTTATTTTTTCATTCCTTTTTCCTTTTCTTTCCCCACCCCCCCTCTTT .........::.::..x:..:::..x.....:..:...:x.:...:x...:.:.:::.....:::...:.::..:.:..:::.:..:...::..:..:::..---------------------.x..:x.....:...x.:x..x:x..x.--------------------------------...x....::...:x..x.::.:.xx..x.....:..:x..::...x.........:.........:.::x:.::::..:... 102M21I28M32I83M 132/213 62.0% 266/94230402 0.0% 53/213 24.9% -28799836 -65430566 +3045 chr4 + 190214555 61856296 61856295 61856356 61 CCTTCCTTCCATTCTTTATTTCCCTTCCTTTCTCCCTCTCTCCCTCCCTCCCTTCTTCTTT chr4 - 94230402 57389177 57389176 57389237 36841166 36841165 36841226 61 CCTTCCTTCCAACCTTGAGTTCCCTCCCTACCTCTGTCTTTCTCTTCCTAGCTTCCTTTCT ...........x:...x.x......:...x:...:x...:..:..:...xx....:.:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 4467119 NA +3257 chr4 + 190214555 61856436 61856435 61856491 56 TTCCTTCCTTCCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTATTTTCTCCCT chr4 - 94230402 32546808 32546807 32546863 61683540 61683539 61683595 56 TCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCT .:.x.:........:...x........::...:.x:x..:............:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 29309628 NA +3983 chr4 + 190214555 61856449 61856448 61856625 177 TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTATTTTCTCCCTCACCTCCCCTCCTTCTTTCCTCCCCTTTCATTCCTCCCTCTTTTCCTCCCTCCCTCTCTCTCTCTGTCTCTCTCT------CTCTTTCTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 31003938 31003937 31004120 63226283 63226282 63226465 183 TTTCTCTTATCCATTCCTTCCACTTCTCACTTATTTTGTTCCTTTTCCTATCTGTATTTTCAGCCCCATACCACTCTTTCCTCTCCCTTACAACCAGACTCTCGTTCTGACCCTTTTTAACAAAATTTCCCCTTCTGCCTTTTTTCATTTTCTGTTTTACTCTGCTCTTACTATTTTTATCTT ...:....x..:x...:..:.x:....:x:.......x.:...:x:.::x:..x:x.:..:xx:...x.x:..:..:.:.....:::::x.xx:.xxx.....x:....x.:..:.:.------x.:.::.::...x:........x:.:...x.:.:x....x:.:..x:.x.....x.:.. 118M6I59M 102/177 57.6% 183/94230402 0.0% 6/177 3.4% 30852511 NA +3110 chr4 + 190214555 61856570 61856569 61856621 52 TTTCTCTCTCTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339959 49339958 49340010 44890393 44890392 44890444 52 TTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT .....:.:.xx:x.x......::.........................::.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 12516611 NA +3035 chr4 + 190214555 61856579 61856578 61856629 51 CTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 36600614 36600613 36600664 57629739 57629738 57629789 51 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTT ...:.....::........:..:..:.:..:..::....:x...:...... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 25255965 NA +3138 chr4 + 190214555 61856579 61856578 61856619 41 CTCTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 - 94230402 81156781 81156780 81156821 13073582 13073581 13073622 41 CTCTTCTTTTTCTCTCTCTCTCTCAGTTTTTTTTTTTTTTT .....:...:..............xx............... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -19300202 -74930200 +3060 chr4 + 190214555 61856581 61856580 61856627 47 CTTTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770966 50770965 50771012 43459391 43459390 43459437 47 CTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT ...:.:............xx...x.....x...x............. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 11085615 NA +3102 chr4 + 190214555 61856584 61856583 61856629 46 TTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770967 50770966 50771012 43459391 43459390 43459436 46 TTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT ..:..............xx...x.....x...x............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 11085617 NA +3226 chr4 + 190214555 61856585 61856584 61856620 36 TTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...................:................ 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 42926673 NA +3102 chr4 + 190214555 61856586 61856585 61856631 46 TTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770967 50770966 50771012 43459391 43459390 43459436 46 TTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT .................xx.:.x.....x...x............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 11085619 NA +3226 chr4 + 190214555 61856587 61856586 61856622 36 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:.................................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 42926675 NA +3128 chr4 + 190214555 61856589 61856588 61856638 50 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGAT chr4 - 94230402 50770968 50770967 50771017 43459386 43459385 43459435 50 TCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCAT ................xx.:.x.....x...x.............:.x.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 11085621 NA +3190 chr4 + 190214555 61856941 61856940 61857034 94 TTTCTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTT---TCTTTCTTT-----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTCCCTTCCTTCCT chr4 - 94230402 73388662 73388661 73388763 20841640 20841639 20841741 102 TTTCATCTGCATTGTTCTTCATTTTTTCTTTTTACCTCGAGTCTTTTTTTAGTTACCTTATATCTTTGTTTTTGTTTTCTGATCCTTTTTCCTTTCCTTCCT ....x...x.x:.x.::...x..:.......:.x:..:---.....:...-----.:..x.x.....x...:.x.:..::xx.....::...:......... 38M3I9M5I47M 66/94 70.2% 102/94230402 0.0% 8/94 8.5% -11531721 -82698681 +3628 chr4 + 190214555 61856993 61856992 61857136 144 TTTCTTTCTTTCTTTCTTTCTTTCCTTCCTCCC-TTCCTTCCTTCCTTCCCTTTCTCCCTCCCTCCCTCTCTCTCTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTTCTTCTTTTTTCAGACAGGTGT--CTTGCTATCTT chr4 - 94230402 79422459 79422458 79422600 14807803 14807802 14807944 142 TTTTTTCCCTCCTTTCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTTTCTCCTTTGCCATTGTTATTTGAGGCTTTCACTCTCTCTTTTC-----TCTCCAGTCAGATTTCCCCTGCTGTATT ...:..:.:.:.....:x.:.........:xx.-...:.x:.....xx.::....:x...:.x.:.:xx.:....::..x.:x.:x..x...xxxx.....x:...:.......-----.:.:...x...:.x.--.:....:.x.. 33M1I80M5D15M2I11M 90/139 64.7% 142/94230402 0.0% 8/139 5.8% -17565466 -76664936 +3976 chr4 + 190214555 61857626 61857625 61857745 120 TTTTTTCTTTTCTGTCTTTTTCCTTCCTTCCT-TCCTTCTTTCTTCCTTTCTTTCTTCCTTC------CTTTCTTCCTTCCTTTCTTCCTTTCCTCCTTTCTT-----TCTTCTCTCTTTCTTTCTTTTTTT chr4 - 94230402 28459066 28459065 28459197 65771206 65771205 65771337 132 TTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTT ......:...x...x....x.:x..x...:..-.x..:...x...x:.:...::......:.------..x.:...x:..:xx.::.:........:xx.:..-----.:..........:x....:..... 32M1I29M6I35M5I24M 85/120 70.8% 132/94230402 0.0% 12/120 10.0% 33398560 NA +3439 chr4 + 190214555 61857649 61857648 61857739 91 TTCCTTCCTTCCTTCTTTCTTCCTTTCTTTCTTCCTTCCTTTCTTCCTTC----CTTTCTTCCTTTCCTCCTTTCTTTCTTCTCTCTTTCTTTCT chr4 - 94230402 91731746 91731745 91731840 2498563 2498562 2498657 95 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACT ..:..:x:...:....x::..x.....:...::...........:....:----x.:......x..:.....::...x::..xx:x...x..x.. 50M4I41M 62/91 68.1% 95/94230402 0.0% 4/91 4.4% -29874097 -64356305 +3259 chr4 + 190214555 61857661 61857660 61857732 72 TTCTTTCTTCCTTTCTTTCTTCCTTCCTTTCTTCCTTCCTTTCTTCCTTT-----CCTCCTTTCTTTCTTCTCTCTT chr4 - 94230402 91731746 91731745 91731822 2498581 2498580 2498657 77 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTT ..::.:x..:......x::..x...:.:...::...........:.....-----:...:.::x.....:...:... 50M5I22M 51/72 70.8% 77/94230402 0.0% 5/72 6.9% -29874085 -64356317 +3027 chr4 + 190214555 61869895 61869894 61869993 99 GCCATTGCAC----TCCAGCCTGGGCAACAAGAGCAAAACT--TTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGA chr4 - 94230402 7711301 7711300 7711405 86518998 86518997 86519102 105 GTCATCGCATGTTTTCAAGCTTGGAAAGCATTCAGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA .:...:...:----..x...:...:x.:..xxx:x....:.--xx.:.....:x.:.....:.............:.:.:xx::.:x.......:...:..:.:. 10M4I27M2I62M 65/99 65.7% 105/94230402 0.0% 6/99 6.1% 54158594 NA +3761 chr4 + 190214555 61869930 61869929 61870064 135 CTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGA---GAGAGGGAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAGAAGAAAGAAAGAAAGAGAAAGAAAAG----AAAGGAAAAAACGTA chr4 - 94230402 30258254 30258253 30258390 63972013 63972012 63972149 137 CTATTCTAAAGAGACAAAAATTGAATGAACAAAAGAGAGAAAGAGAAACATTGAGAACTGAATGTGA-----AGAATTAAATACAGGGTAAATAAAGAAGAGGAAAACAATGAGAAGGAAAAGGGTAAAAGTAATAAACATA ..x.x:....:.:.x.....xx:..x:..x..:.......:.......x.xx....---..:x.x..-----...:xx.:.x.x.::.x...x........:::...x..x.....:......----....x..x....:.. 56M3I8M5D51M4I15M 91/130 70.0% 137/94230402 0.0% 12/130 9.2% 31611676 NA +3295 chr4 + 190214555 61869931 61869930 61870059 129 TTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAGAGAGAGA-GAGAGAAAGGAAAGAAAGAAGAAAGAAAGAAAGAGAAAGAAAAGAAAGGAAAAA chr4 - 94230402 11253644 11253643 11253772 82976631 82976630 82976759 129 TTTAATATGAAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAG-GAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA ...:x..x:..:..:...x:..::..:..x.:x:.::.:..xxx.:.x...:.:..::.:........-......-.....xx.x:x..:..:x.::x:::....x.:......x......x..:x.:.. 68M1D6M1I54M 79/128 61.7% 129/94230402 0.0% 2/128 1.6% 50616287 NA +3288 chr4 + 190214555 61874750 61874749 61874811 62 TTCATTTGTGTAAAATATTTTCAACGACATCAAAATGCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 62215841 62215840 62215893 32014510 32014509 32014562 53 TTCATTTGT---------CTGCAGTGACATTAAAATGCTCTTTTCTTTTTCTTTTTTTTTTT .........---------:.x..::.....:.............:.....:........... 9M9D44M 46/53 86.8% 53/94230402 0.0% 9/53 17.0% -341091 -93889311 +3045 chr4 + 190214555 61892112 61892111 61892163 52 TGTGTTTAAGGAGACTATATTCAGGATTGCTCTTTATTTTTTAGCTTGTCAG chr4 - 94230402 27699442 27699441 27699493 66530910 66530909 66530961 52 TATCTTTATAGCAACTATATTCAGAGTTGCTCTTTATTTCTTAGAATGTCAG .:.x....x:.x:...........::.............:....xx...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 34192670 NA +3469 chr4 + 190214555 61931972 61931971 61932057 86 CCTGAATCTGTTCATTAGTTTATATATATATATATTTACACACGTACACACACATATACATTCATATATATATACACATACACATA chr4 - 94230402 53842106 53842105 53842186 40388217 40388216 40388297 81 CCCAAATGTGTTT-----TTTTTATAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACA ..::...x....:-----...x....xx..:.:.x.......:x.::.::.......:...x...:..x...x...........:. 13M5D68M 59/81 72.8% 81/94230402 0.0% 5/81 6.2% 8089866 NA +3018 chr4 + 190214555 61936653 61936652 61936720 68 GCATGTATCTGTATGTGTGTATATATGTATGTATAGATGTGTGTGTATATATATATAAATATGTATAT chr4 - 94230402 53636609 53636608 53636676 40593727 40593726 40593794 68 GCATGTATCTGTATGTCTTTATTTAGGCATGTATAGATGTATATGGGACTATCTGTGAGGATAAAGAT ................x.x...x..x.:............:.:..x:xx...x.:.:.:x..:x.x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 8300044 NA +3049 chr4 + 190214555 61936755 61936754 61936808 54 CATATTTGTACATATGTACATATGCATACACACACACACACACACACACACACA chr4 - 94230402 8395809 8395808 8395862 85834541 85834540 85834594 54 CATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.x.x..........:::x.:...xx.:.................x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 53540946 NA +3133 chr4 + 190214555 61936756 61936755 61936875 120 ATATTTGTACATATGTACATATGCATACACACACACACACACACACACACACACACACAGAGATATATTTCTCTTTTGCC-----AAGAAAGGGAGATCATTTAATCTGCCAAGTGATAGGAAGA chr4 - 94230402 14964825 14964824 14964935 79265468 79265467 79265578 111 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA-------------CTGTTGACTGAATAGGACAGCTACAGCTATCAATCTGTAGAGTGA-AGGAAGA ....x.x.:.:.:..:...::..:..::.:.:...xx........::............-------------..x...x.-----.:..x..xx.x.x.xx.:......:x:.....-....... 59M13D8M5I32M1D7M 75/106 70.8% 111/94230402 0.0% 19/106 17.9% 46971931 NA +3024 chr4 + 190214555 61936761 61936760 61936820 60 TGTACATATGTACATATGCATACACACACACACACACACACACACACACACACAGAGATA chr4 - 94230402 8395811 8395810 8395870 85834533 85834532 85834592 60 TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:x..::..::.....x....:xx.:.................x.....x.x::... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 53540950 NA +3034 chr4 + 190214555 61993256 61993255 61993329 74 TGTTTTTGTTTCTGTTTCTTTTTTTCTTTCTTTCCTTTTTTTTTTTTTTTTTTTTGAGGTGAATTCTCATTCTG chr4 - 94230402 39136248 39136247 39136321 55094082 55094081 55094155 74 TATCTTTGTGTTTTTTAATCTGTTTCTTTCTTTCTTTTTTTTTTTTGTCCTTGTGGAAGGGAAGGCTATTTTTG .:.:.....x.:.x..xx.:.x............:...........x.::..x.x..:.x...xx..xx..:.. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 22857008 NA +3482 chr4 + 190214555 62005914 62005913 62006010 97 AAAATTTGCTAGTTTTTATTT-TATTTATATATATACATACATATATATACACATACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395773 8395772 8395870 85834533 85834532 85834630 98 AAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......:x.:..x::x.:.x.-...x.:.::...x....::..x..:...:::..:.x:...:xx.:.................x.....x..:x... 21M1I76M 65/97 67.0% 98/94230402 0.0% 1/97 1.0% 53610141 NA +3064 chr4 + 190214555 62005935 62005934 62005991 57 TATTTATATATATACATACATATATATACACATACACACACACACACACACACACAC chr4 - 94230402 14964828 14964827 14964884 79265519 79265518 79265575 57 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...:::.:.::...::::...:....:...xx........::............. 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 47041107 NA +3069 chr4 + 190214555 62005935 62005934 62006006 72 TATTTATATATATACATACATATATATACACATACACACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395799 8395798 8395870 85834533 85834532 85834604 72 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.x:...x.:..::..x:.:....:..::.x....:xx.:.................x.....x.::x... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 53610136 NA +3330 chr4 + 190214555 62005935 62005934 62006012 78 TATTTATATATATACATACATATATATACACATACACACACACAC--ACACACACACACACACACACACACATATATATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.x...:.:.::.:.x....:...x....:..::.::.x:...:--.:.................x.....x..:x... 45M2I33M 55/78 70.5% 80/94230402 0.0% 2/78 2.6% 53610144 NA +3020 chr4 + 190214555 62005939 62005938 62005996 58 TATATATATACATACATATATATACACATACACACACACACACACACACACACACACA chr4 - 94230402 8395805 8395804 8395862 85834541 85834540 85834598 58 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x.:..:..:x.......:...:.x:.:.:xx.:.................x..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 53610134 NA +3014 chr4 + 190214555 62005940 62005939 62005992 53 ATATATATACATACATATATATACACATACACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x......::...::x....:xx.:.................x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 53610130 NA +3082 chr4 + 190214555 62005944 62005943 62006032 89 ATATACATACATATATATACACATACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATA chr4 - 94230402 89016082 89016081 89016170 5214233 5214232 5214321 89 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACA ..:.:..:....x.::..:....:....::x::.:........::..x.::..:....::.x..:.:.:.::.x.:.:x.::::.:.:. 89M 51/89 57.3% 89/94230402 0.0% 0/89 0.0% -27010138 -67220264 +3361 chr4 + 190214555 62005945 62005944 62006028 84 TATACATACATATATATACACATACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATA chr4 - 94230402 73121102 73121101 73121185 21109218 21109217 21109301 84 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATA .:.:...:.....x:.........:.....x.x:..::x::...:..::.:.x::....:x:.....:.:x:..:.....x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% -11115157 -83115245 +3009 chr4 + 190214555 62005979 62005978 62006025 47 CACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x....::...:..::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -25366768 -68863634 +3131 chr4 + 190214555 62005981 62005980 62006027 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -25366766 -68863636 +3046 chr4 + 190214555 62005994 62005993 62006052 59 ACACACACACATATATATATATATATATATATATATATATTTTTTTTTTTTTTTGAGAA chr4 - 94230402 8681930 8681929 8681988 85548415 85548414 85548473 59 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGA .:.:.x.:.:......:...::.:.:.:...:.....xx.:...............::. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 53324064 NA +3332 chr4 + 190214555 62005996 62005995 62006075 80 ACACACACATATATATATATATATATATATATATATATTTTTTTTTTTTTTTGAGAAAGGGTTTTGCTCTTGTTGCCCAG chr4 - 94230402 8681930 8681929 8682004 85548399 85548398 85548473 75 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTG-----ATTGTCCAG .:.:.x.:........:...::.:.:.:...:.....x:.:...........xx...::.x.....-----:...:.... 66M5D9M 54/75 72.0% 75/94230402 0.0% 5/75 6.7% 53324066 NA +3075 chr4 + 190214555 62006003 62006002 62006047 45 CATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 92735350 92735349 92735394 1495009 1495008 1495053 45 CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTT .....x.....:...:..:.:...............:.x...... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -30729347 -63501055 +3127 chr4 + 190214555 62007327 62007326 62007403 77 GCAGAGCTCAGGGCAAGAGGACAAAATGATTATATATATATATATATATATATATATACACACACACACATATATAT chr4 - 94230402 64433186 64433185 64433262 29797141 29797140 29797217 77 GTACAGCTCAACGTAGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTAT .:.x......:x.:.::.::.xx...x:x..x.x.:.:.:.........x..:.:........:..:..:...:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -2425859 -91804543 +3247 chr4 + 190214555 62007370 62007369 62007462 93 ATATATATATATATACACACACACACA----------------------TATATATATACACGTATATATATATACACATATATATATATATACACACACATATATATACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATA ..x..x.:...................----------------------:.:..:...xx.x.:..x..x............x...x.....:.---....x.:.:xx....... 27M22I45M3D18M 70/90 77.8% 112/94230402 0.0% 25/90 27.8% 57590027 NA +3055 chr4 + 190214555 62007372 62007371 62007434 63 ATATATATATATACACACACACACATATATATATACACGTATATATATATACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x.....x.:.......:..:.:x.::.x.:....x.:.:.::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 44486623 NA +3035 chr4 + 190214555 62007394 62007393 62007457 64 ACATATATATATACACGTATATATATATACACATATATATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x....:x...:.:...:.::::x..::x.:....x.....::........... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 44486645 NA +3395 chr4 + 190214555 62007397 62007396 62007464 68 TATATATATACACGTATATATATATACACATATATATATATATACACACACATATATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xxx.:.....:......x.....:..:x.:..:.:.x..:...:..:..:....:.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 13840359 NA +3022 chr4 + 190214555 62007400 62007399 62007476 77 ATATATACACGTATATATATATACACATATATATATATATACACACACATATATATACATATATGTGTGTGTATATA chr4 - 94230402 89016082 89016081 89016158 5214245 5214244 5214321 77 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACA ..:.::....:.x.::..::.:.....::.x.::::.:.:...::..x..::...:..:..x.........:.x.:. 77M 47/77 61.0% 77/94230402 0.0% 0/77 0.0% -27008682 -67221720 +3069 chr4 + 190214555 62007428 62007427 62007506 79 ATATATATATATACACACACATATATATACATATATGTGTGTGTATATATATATATATGTATATATATCTCCTAACCTC chr4 - 94230402 66904847 66904846 66904925 27325478 27325477 27325556 79 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTC ......:..::............:.:.:...:....x.:x..x:.x:.:....:.xx::..:::..x..::..x.x... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% -4897419 -89332983 +3279 chr4 + 190214555 62011937 62011936 62011985 49 TTTTTTTTCCTAACATAGCTTTCTTTAAAATGACACAACTTATTTTAAA chr4 - 94230402 52410874 52410873 52410922 41819481 41819480 41819529 49 TTTTTTTTCCTAATTTAACTTTCTTTAAAATGACATTACCTATCTGAAA .............:x..:.................:x..:...:.x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 9601063 NA +3199 chr4 + 190214555 62080909 62080908 62080978 70 TAGGTGAAAAATGTCATGGGAAAACGATACACACACACACACACACATACATATGTGTGTATGTATATAT chr4 - 94230402 87372727 87372726 87372793 6857610 6857609 6857676 67 TAAGAGAAAAAAATTATTTCCAAAC---ACACACACAGACACACACATCTATACGTATGTACGTATATAT ..:.x......x:.:..xxxx....---.........x..........x:...:..:....:........ 25M3D42M 52/67 77.6% 67/94230402 0.0% 3/67 4.5% -25291818 -68938584 +3203 chr4 + 190214555 62100172 62100171 62100267 96 TGGCATGATCTTGGTTCACTGCAGCATTTGCCTCCCAGGTTCAAGTGATGCTCCTGCCTCAGCCTTCTAAGTAGCTGGGATTACAGCTGCCACCAC chr4 - 94230402 18197114 18197113 18197202 76033201 76033200 76033289 89 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-CACCAC ......x..x..------..:....x:xx:x..:.::..........x.x.x.xx.x.........::..........:.:....xx..-...... 12M6D71M1D6M 65/89 73.0% 89/94230402 0.0% 7/89 7.9% 43903058 NA +3176 chr4 + 190214555 62106536 62106535 62106653 118 GCATAGTTTGCAAAAATTTTCTCCCATTCCGTAGGTTGTCTGTATACTCTTTTTTTTT----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTGCAGAAGCTCTTTAGTTTAA chr4 - 94230402 11044409 11044408 11044548 83185855 83185854 83185994 140 GCATTGTTTCCCAAAATTGTTGCTGTTCTTTTTTGTTGTTTTTTGGGTTTTTTTTACTGAGTTAATTAGAATAAAGAGGCTTTCCTTTTTTTTTTTTTTTTTTTCCCATCTCTTTGGTGCCCATAAGCACTTTAGACTAA ....x....x.x......x.:x.:xx.:::x.xx.....:.x.xx:x.:......x:.----------------------...::...................:::x.:.:....x..:x..x....x......x:... 58M22I60M 79/118 66.9% 140/94230402 0.0% 22/118 18.6% 51062127 NA +3061 chr4 + 190214555 62126816 62126815 62126882 67 AAAATAACACAAACAAAAAAAAATAAAAACAAAACAACAATAAAAAAAGTAAATTTCAAATTGTATT chr4 - 94230402 24587683 24587682 24587746 69642657 69642656 69642720 64 AAAATGGGGAAAATAAAAAAAAA---AAGCAAAACAACAACAAAAAAAGGCAGTTTCTAAAAGTATT .....::x:x...:.........---..:...........:........xx.:....x..xx..... 23M3D41M 50/64 78.1% 64/94230402 0.0% 3/64 4.7% 37539133 NA +3212 chr4 + 190214555 62141961 62141960 62142074 114 AATATGAAAAAATAACTAAATAAAAAATATACATATATACAT---------ATATAAATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATTT chr4 - 94230402 19704223 19704222 19704341 74526062 74526061 74526180 119 AaaacaaacaaacaaagaaacaagcaaaACAGAAACAAGCAACCTGAAGCAATCTAAATACATAT----ATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTT ..x.::..x...:..xx...:..:x..x.:.x.x.:.x:..x---------..x......:....----...::..:....x.....:...x::..............x..x.xx:...x... 42M9I14M4D54M 76/110 69.1% 119/94230402 0.0% 13/110 11.8% 42437738 NA +3670 chr4 + 190214555 62141964 62141963 62142075 112 ATGAAAAAATAACTAAATAAAAAATATACA-------------TATATACATATATAAATATATATTTATATATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTATTTT chr4 - 94230402 19704234 19704233 19704357 74526046 74526045 74526169 124 acaaagaaacaagcaaaACAGAAACAAGCAACCTGAAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA-ATATTTT .::..:...:..x:...xx.:...:.x:..-------------..x...........x:.........:.:...:.x...:............x:.x.xx....x.x.xx..x..:.-:...... 30M13I74M1D7M 79/111 71.2% 124/94230402 0.0% 14/111 12.6% 42437730 NA +3370 chr4 + 190214555 62148100 62148099 62148289 190 TTTTGATTA---TATACTATA-TGTAAGTTCTCTATTTATAATTATAATTTTCTCATTAATAATAATAATAAATCATACCTATATTGTACCTT-----GAAATTATCAAAGCCCCTTTCATTTCCACCTCATTTTCTCTCTTTCTCTTTTTCTCTTTCTTTTTCCCTGTTCTTTTAGTCTCTGTCTCTCCTTCAGAAAA chr4 - 94230402 40193205 40193204 40193380 54037023 54037022 54037198 176 TTTTGATAAAATTGTAACATACTGTATGCTTTCTACCTGTAAATGC-----------Caataatagaattaaa--atatttatttaaaatCTTTAGTGGGCATTATTGGAGTTG-TTTCATCT---------TTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGAAAA .......x.---.:..x:...-....x.:.:....::.:...x.::-----------:.......:x.x....--...::...x.x:x.:...-----.:x.....:::..::x-......:.---------.........:.x......x...:.:xx::...x..x..:....xx.:.:.x.:.:....:....... 9M3I9M1I24M11D16M2D18M5I16M1D8M9D67M 114/167 68.3% 176/94230402 0.0% 32/167 19.2% 21954895 NA +3139 chr4 + 190214555 62150615 62150614 62150654 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 43168300 NA +3102 chr4 + 190214555 62150617 62150616 62150652 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -19478447 -74751955 +3353 chr4 + 190214555 62150617 62150616 62150656 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 43168302 NA +3330 chr4 + 190214555 62150619 62150618 62150718 100 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG-------------AGAGAGAGAGA---CAGAGAGAGAGAAACAGACAGAGAA------AGAGAGAGAGAGAAGATATTTGAAAA chr4 - 94230402 81629064 81629063 81629185 12601218 12601217 12601339 122 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAGAGTGGTGGGGAGGATTTTCTAAAA ..........:.........................x.-------------.:.x.x.:.x:---..x.:.....:.xx....x:..x..------....x.:x:.:..:...x..:x.... 38M13I11M3I25M6I26M 75/100 75.0% 122/94230402 0.0% 22/100 22.0% -19478445 -74751957 +3567 chr4 + 190214555 62150619 62150618 62150658 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 43168304 NA +3102 chr4 + 190214555 62150621 62150620 62150656 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -19478443 -74751959 +3353 chr4 + 190214555 62150621 62150620 62150660 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 43168306 NA +3139 chr4 + 190214555 62150623 62150622 62150662 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 43168308 NA +3158 chr4 + 190214555 62180202 62180201 62180239 38 AAAAAAAATTAAAAAAACAAAACAAACAAACAAAAAAA chr4 - 94230402 24339910 24339909 24339947 69890456 69890455 69890493 38 AAAAGAAATTAATAAAACAAAACAAACAAACAAAAAAA ....:.......x......................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 37840292 NA +3306 chr4 + 190214555 62215158 62215157 62215237 80 CTGCAACCTCCGCCTCCTAGGTTCAAGTGAATCTCATGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCATGTTCCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACT ..:..:..:xx:x..:..:..........xx..x..x.x........::::....:....:......--.:..:x..... 67M2D11M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% 44018032 NA +3139 chr4 + 190214555 62219060 62219059 62219099 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 43236745 NA +3102 chr4 + 190214555 62219062 62219061 62219097 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -19410002 -74820400 +3224 chr4 + 190214555 62219062 62219061 62219097 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ..................x................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 43236747 NA +3473 chr4 + 190214555 62219064 62219063 62219103 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGCAGG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................x.:. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 43236749 NA +3416 chr4 + 190214555 62219064 62219063 62219100 37 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGC chr4 - 94230402 81629064 81629063 81629100 12601303 12601302 12601339 37 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGC ..........:.......................... 37M 36/37 97.3% 37/94230402 0.0% 0/37 0.0% -19410000 -74820402 +3752 chr4 + 190214555 62253694 62253693 62253785 92 TGGCATCATCATAGCTCACTGCAGCCTCAAACCCCCCGGGCTCAAGTGATCTACCGGCCTCAGCCTCCCAAGTAGCTAGGTCTACAGGCACA chr4 - 94230402 18197114 18197113 18197198 76033205 76033204 76033289 85 TGGCATCATGTT------CTACAGCC-CAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .........xx.------..:.....-....x.::.:...:.......x.::..x..x........::.........:.:x.....x.::.. 12M6D8M1D65M 64/85 75.3% 85/94230402 0.0% 7/85 8.2% 44056580 NA +3727 chr4 + 190214555 62264646 62264645 62264758 113 GTAAAAAGTTGTTATCACTTCCTTTTTACAGTTAAGGAAATTGAGAGTTACACAGGTTAAATGATTTGTCCTAGGTCATATAGATAAAGAGAGTATGGGTATGTCTGTGTAAC chr4 - 94230402 10729186 10729185 10729295 83501108 83501107 83501217 110 GTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC---TGGGTACAGAATCCAGGTATGTGGGTGTGTGAC ...::x.:..::.....x:...x........x.::.:...:....:xx:.:.........:.:.....:..x::...---.:.:..x...:xx:.x.x:.:..xx.....:.. 77M3D33M 71/110 64.5% 110/94230402 0.0% 3/110 2.7% 51535460 NA +3477 chr4 + 190214555 62274474 62274473 62274552 79 CTGCAACCTCCGCCTCCCGGGTTCAAGGAATTCTCCTGCTTCAGCCTCTCAAGTAGCTGGAATTACAGATGTGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:..:..:xx:x..:.:.........x:x...x.xx.x:.......:..............:...--.:...:..... 66M2D11M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 44077348 NA +3235 chr4 + 190214555 62281155 62281154 62281250 96 GTCTTC---TATTTTACCATTTTTATTTTCTCTTT--------TTTTTAATTTTTTTCCCTTTGCTCTTTCTTTTTTTCTTTTTCTTTTCCTTATGCTTTAGTTCTT chr4 - 94230402 5983365 5983364 5983471 88246932 88246931 88247038 107 GTCTTCAGACGTCTTTCTATTTTTAACATCATTCTGTGGAGTATTTCAGGTTTTATTCAATTTCCTCTTTCTTTTTTTTTTTTTCTTTTGCTTGAGCCTCCATTCCT ......---::.:..x.:.......x:x..x:.:.--------...:x::....x...xx...x..............:..........x...:x..:.:x:...:. 6M3I26M8I64M 68/96 70.8% 107/94230402 0.0% 11/96 11.5% 56297790 NA +3157 chr4 + 190214555 62281189 62281188 62281254 66 TTTAATTTTTTTCCCTTTGCTCTTTCTTTTTTTCTTTTTCTTTTCCTTATGCTTTAGTTCTTTTCT chr4 - 94230402 40466336 40466335 40466401 53764002 53764001 53764067 66 TCTAATATTTTCCATTTTGTCCTTTTTTTTTTTCCTTTTCTTTTCCCCTCATTTAGATTCCCTTTT .:....x....:.x:....::....:........:...........::x:::..x::...::..:. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 21814853 NA +3541 chr4 + 190214555 62287853 62287852 62287970 118 GTGTATATGTGTGTATGTATATGTAT----ATATGTATATGTACATATGTATACACACCCACATATATATACACATACATAGTA---------TACATTCAGG-------GTTAGATATAATGATGGCAAAGATGTAT chr4 - 94230402 8395790 8395789 8395922 85834481 85834480 85834613 133 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTAT-----TAATAAAGCTGTAT ....:........:..:x.:......----........::x.....xx:..:......x....:.:.x.:...x..:x...:x.---------.......x..-------.x...:...-----.:::....x..... 26M4I54M9I10M7I9M5D14M 84/113 74.3% 133/94230402 0.0% 25/113 22.1% 53892063 NA +3290 chr4 + 190214555 62287867 62287866 62287941 75 ATGTATATGTATATATGTATATGTACATATGTATACACACCCACATATATATACACATACATAGTATACATTCAG chr4 - 94230402 49414744 49414743 49414815 44815588 44815587 44815659 72 ATTTATAT---TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATAGTCCTCATTAAG ..x.....---.:.:.....:....x.:.x:.........x:x.....:...:....:.......x:x....x.. 8M3D64M 54/72 75.0% 72/94230402 0.0% 3/72 4.2% 12873123 NA +3207 chr4 + 190214555 62287875 62287874 62287929 55 GTATATATGTATATGTACATATGTATACACACCCACATATATATACACATACATA chr4 - 94230402 79214675 79214674 79214729 15015674 15015673 15015728 55 GTTTATAGGTTTCTATGCATATGCATACACACCCACACATATACATACATGCTTA ..x....x..x.x.:.:......:.............:.....:.:....:.x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -16926800 -77303602 +3062 chr4 + 190214555 62326068 62326067 62326131 64 TGACAGAGTGAGACTCTGTCTCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAAAGA chr4 - 94230402 31704319 31704318 31704382 62526021 62526020 62526084 64 TGTCTGTGTAACACCTCCTTCCACCACCAAAACAAAACTAAAACAAACAAACAAACAAAAAAAA ..x.x.x..:.x..:::x.::..xx.x..........x:.......................:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 30621749 NA +3085 chr4 + 190214555 62326081 62326080 62326129 49 CTCTGTCTCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAAA chr4 - 94230402 37389975 37389974 37390019 56840384 56840383 56840428 45 CTCTGT----GAAGAAAAACAGAAACAAAACAAACAAACAAACAAAAAA ......----:..:x......:........................... 6M4D39M 41/45 91.1% 45/94230402 0.0% 4/45 8.9% 24936106 NA +3049 chr4 + 190214555 62326083 62326082 62326130 48 CTGTCTCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAAAG chr4 - 94230402 18056074 18056073 18056121 76174282 76174281 76174329 48 CTGATTCCACAACAAAACAAAAGCAATGAAAACAAACAAACAAAAAAG ...x:..x.x............:...x:x................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 44270009 NA +3049 chr4 + 190214555 62326083 62326082 62326130 48 CTGTCTCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAAAG chr4 - 94230402 18052519 18052518 18052566 76177837 76177836 76177884 48 CTGATTCCACAACAAAACAAAAGCAATGAAAACAAACAAACAAAAAAG ...x:..x.x............:...x:x................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 44273564 NA +3097 chr4 + 190214555 62326088 62326087 62326134 47 TCAAAAACAAAACAAAAACAAAACAAACAAACAAACAAAAAAGATGA chr4 - 94230402 40527164 40527163 40527210 53703193 53703192 53703239 47 TCAAATTCTAGACAAAAACAAAACAAACAAACAAACAAAAAGAACAA .....xx.x.:..............................::.::. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 21798924 NA +3094 chr4 + 190214555 62326093 62326092 62326129 37 AACAAAACAAAAACAAAACAAACAAACAAACAAAAAA chr4 - 94230402 57216528 57216527 57216564 37013839 37013838 37013875 37 AACAAAACAAAAACAAAACAAACAAACAAAAAAAAGA ..............................x....:. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 5109565 NA +3712 chr4 + 190214555 62343111 62343110 62343256 146 ATCTACAATCTTGGTATTTGATTTCTATTTGTCCCATATTGTACAATTT--TAGTTC--TGCTGTTGTTTGTTTGTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGAGT-ATTCCATTTTAACTCTTCTGAAAGCTTTATAACT chr4 - 94230402 26671500 26671499 26671641 67558762 67558761 67558903 142 ATCTATTATTTCAGT--TTAACTT-TGCATATCCC---TTGTACAGTTTCCTAGCTTATTGCTGTTGTTTGTTTGTTTGTTTTCTGCTCTTTTTTTCTCCTGCTTTTTGTTTTATTGAGGCCATCATAA---TTCAGCAAACTCTGGAACT .....:x..:.::..--..:.:..-.::x.:....---.......:...--...:.:--.......................::.x..:.:...:.:..:.x....:.x.:.x.x.-.xx....:x...---...x.x..:..:.:x.... 15M2D7M1D10M3D11M2I6M2I57M1I12M3D19M 99/137 72.3% 142/94230402 0.0% 14/137 10.2% 35671611 NA +3120 chr4 + 190214555 62343149 62343148 62343204 56 TTGTACAATTTTAGTTCTGCTGTTGTTTGTTTGTTTGTTTCTTTCTTTCTTTCTTT chr4 - 94230402 59995204 59995203 59995259 34235144 34235143 34235199 56 TTCTACAATTTTGCTTCTGCTGTTTTTTGTTTGTTTGTTTGTGTTACAATTTCTTT ..x.........:x..........x...............x.x.:x:xx....... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 2347945 NA +3163 chr4 + 190214555 62355209 62355208 62355294 86 TCCCTTCCCTTCCCCTCCCCTCCCCTCCCCTCCCCTCCTCTCCTCTCCTCTCCTTTCCTCTTTTCTTTCTTTTCTTT------TCTTTCTCC chr4 - 94230402 18501281 18501280 18501372 75729031 75729030 75729122 92 TCACTCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCC ..x..:..:..x..:.:..x.....:....:........:.::.:...:.:.:..x.::.x.:.x:xx:..:...:.------...:.:... 77M6I9M 56/86 65.1% 92/94230402 0.0% 6/86 7.0% 43853928 NA +3111 chr4 + 190214555 62355243 62355242 62355292 50 CTCCTCTCCTCTCCTCTCCTTTCCTCTTTTCTTTCTTTTCTTTTCTTTCT chr4 - 94230402 36600614 36600613 36600663 57629740 57629739 57629789 50 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTT .....:.::..::.....:..:...:.:.....:......x.......:. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 25754629 NA +3090 chr4 + 190214555 62389936 62389935 62390035 100 TGCCGAGCAAAGTTTCCAACCTCATCTGTGGCT------ATATATATGTATATATATATATATGTATATACACACACACACACACATATATATATATACATATATA chr4 - 94230402 8395765 8395764 8395870 85834533 85834532 85834638 106 TACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.x..:x...:..:..x.xx:...x....xx.------...x.:......x..:....:....:x..:.:xx.:...........:.:.:.x.:.:.x..:x... 33M6I67M 66/100 66.0% 106/94230402 0.0% 6/100 6.0% 53994171 NA +3256 chr4 + 190214555 62389965 62389964 62390043 79 GGCTATATATATGTATATATATATATATGTATATACACACACACACACACATATATATATATACATATATATATATATT chr4 - 94230402 4481676 4481675 4481754 89748649 89748648 89748727 79 GACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATT .:..:...:.:.x.x:.....x:.:.:.....:.:....x...:.....:x:.:...:x:xx........:..:.:... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 57908289 NA +3053 chr4 + 190214555 62389968 62389967 62390018 51 TATATATATGTATATATATATATATGTATATACACACACACACACACATAT chr4 - 94230402 25393260 25393259 25393310 68837093 68837092 68837143 51 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGT .:.:.::....:...:...:...x...:.:.............:....::. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 36996708 NA +3049 chr4 + 190214555 62401582 62401581 62401626 45 CAACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGA chr4 - 94230402 36532068 36532067 36532112 57698291 57698290 57698335 45 CAACTCTGTGTGTATGTGTGTGTGTGCATATGCAAGTAAAAGAGA .............:............::.:..::x..:.:..... 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% 25869514 NA +3382 chr4 + 190214555 62401585 62401584 62401637 53 CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982302 18982301 18982354 75248049 75248048 75248101 53 ctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....x.x.x.x.x..................x.x...............:... 53M 45/53 84.9% 53/94230402 0.0% 0/53 0.0% 43419283 NA +3367 chr4 + 190214555 62401585 62401584 62401641 57 CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAGGG chr4 - 94230402 18982298 18982297 18982354 75248049 75248048 75248105 57 ctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....x.x.x.x.x.x.x.................................:..:::. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 43419287 NA +3409 chr4 + 190214555 62401585 62401584 62401640 56 CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAGG chr4 - 94230402 18982300 18982299 18982355 75248048 75248047 75248103 56 ctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ....x.x.x.x.x.x..................x................:::... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 43419285 NA +3414 chr4 + 190214555 62401585 62401584 62401694 110 CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGAGGGAGAGAGAGAGAGAAGAGTGAATTTTGTTGCTAAGATTTTATTGCTAAGACTCT chr4 - 94230402 18982296 18982295 18982389 75248014 75248013 75248107 94 ctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG----------------GATTTATTTTGTGATAATTTTGTGCCTGAGAGTTT ....x.x.x.x.x.x.x.x................x..............:.....:..----------------..x..x.x...:x.x:.....:.xx..:...x.:. 59M16D35M 70/94 74.5% 94/94230402 0.0% 16/94 17.0% 43419289 NA +3002 chr4 + 190214555 62401600 62401599 62401634 35 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.......x................ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% -19227464 -75002938 +3185 chr4 + 190214555 62401602 62401601 62401637 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................:.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -19227462 -75002940 +3231 chr4 + 190214555 62406519 62406518 62406589 71 GAGCTTTAAGATTTGACTGTCCCACTGGATTTCCTTCTTTTTTATTTCTTTTTTCTTCTTTTTTTTTTTTT chr4 - 94230402 73302892 73302891 73302962 20927441 20927440 20927511 71 GGGCTTTACAGATCCACTGTCTCACTGGGTTGAATTATTTCCTCACTTTCTTTTCTTCTTTTTCTTTTTTT .:......x::x.:x......:......:..xxx..x...::.xx:.:.:.............:....... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -10896373 -83334029 +3169 chr4 + 190214555 62461338 62461337 62461414 77 CTAAATATATATATATATATGTTTAAAGAGTATATATATATATATATATATATATATATATATGTTTAAAGAGTATA chr4 - 94230402 43886407 43886406 43886483 50343920 50343919 50343996 77 CTGATTACGAATATATTTATGTACAAAGTGTATATATAAGTATGTATAGATATAATTACATGTATTTGCAAATGATA ..:.x..::x......x.....x:....x.........x:...:....x.....xx..:..:.:...:x.:.xx... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 18574931 NA +3001 chr4 + 190214555 62476774 62476773 62476820 47 TTCTTATATTTTCTTTCAAAATCTTTCTTCTTCATTTCTTCTGTGTT chr4 - 94230402 29179461 29179460 29179507 65050896 65050895 65050942 47 TCTTTAAATTTTCTTTCTAAATCTTTCCTGTCCATTTCTTCTGTCTT .::...x..........x.........:.x.:............x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 33297313 NA +3101 chr4 + 190214555 62490379 62490378 62490449 71 TGTCCCTTCTCTCTTCCTTTCTTTCTCCTTCTTTCCTGTTTCAATAATACAATCTTCCTAAATGTATGAAG chr4 - 94230402 39586707 39586706 39586777 54643626 54643625 54643696 71 TGTACTCTCCCTCTTCCTTTCTTTGTCTCTCTTTGTTATTTGTGTAATAAAATTCCTCTAGGCATACAAAG ...x.::..:..............x..::.....x:.:...xx:.....x...::::...::::..::... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 22903672 NA +3424 chr4 + 190214555 62504319 62504318 62504385 67 CTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCATCACT chr4 - 94230402 18197139 18197138 18197203 76033200 76033199 76033264 65 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACT ..:.::........::x...x.xx.x........::.............:....--.:....:.... 54M2D11M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 44307180 NA +3229 chr4 + 190214555 62532238 62532237 62532324 87 GCCAAAAAAGAAACGAAGGAAGGATGGAAGGAAGGATGGAAGGAAGGATGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGAAAGAAAG chr4 - 94230402 92290874 92290873 92290960 1939443 1939442 1939529 87 GCCGAGCAATGGATGGGAGGAGAACAAAGGGAAGGATGAAAGGAAGGACGTGCTGTAGGAAAGCAAGGTTAAAAGGGAAAAAGAAAG ...:.:x..x::.:.:::.:..:.:::.:.........:.........:.x:xx.x.....:.x.:.:xx:..:..:::........ 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% -29758636 -64471766 +3122 chr4 + 190214555 62533026 62533025 62533072 47 TGTCTGTCGGTGTGTGTGTGTGTGTATATATATATATGTATATATAT chr4 - 94230402 9151847 9151846 9151893 85078510 85078509 85078556 47 TGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ..::.x.::.......................x....x.:....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 53381179 NA +5455 chr4 + 190214555 62602090 62602089 62602214 125 TCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTGTCTTTTTCTTTTCTTTTCTTTCTTTCT------------------TTCTTTCTTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTTCTTCCCT chr4 - 94230402 54286407 54286406 54286549 39943854 39943853 39943996 143 TCTTTTCCTCTTTCATTCTTCTCTACTCTCATTTTCTCTCTTTATGCTCTTCTTTCTCCCTGCTTGCTAtcttctcttattctttcttctcctctttcttctctcccttccctctttgcttattctcctttcttttttttcct .....:.:......x......::.x..:..x..x...:.:.:.x.x..:........::..------------------...........:....:.:.......:..::::.:..:x..:x:...:::..:....:..:... 61M18I64M 88/125 70.4% 143/94230402 0.0% 18/125 14.4% 8315683 NA +3066 chr4 + 190214555 62602137 62602136 62602179 43 TTTTCTTTCTTTCTTTCTTTCTTCTTCTCTCTTTTCTCTCTCT chr4 - 94230402 92014228 92014227 92014270 2216133 2216132 2216175 43 TTTCCTTCCTTTCTTTCCTTTTTCTTCTCTCTTTTCTTTTGCT ...:...:.........:..:................:.:x.. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% -29412091 -64818311 +3494 chr4 + 190214555 62602158 62602157 62602221 64 TTCTTCTCTCTTTTCTCTCTCTCTTTTTTTCTCTCTCTCTTTCTTTTTTTCTTCCCTTTGAATG chr4 - 94230402 31754631 31754630 31754694 62475709 62475708 62475772 64 TTCCCCACCCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTTTGAATG ...::.x.:.:...x.:.......:...:....x:..:.:::.:......:....:........ 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 30847527 NA +3153 chr4 + 190214555 62623144 62623143 62623247 104 TTTATTGAAAAACAT--GTGGGGTGCCTTGGAGAAAAGGATGTTATTT--TCTTTTTCTTTTCTATTCTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193270 40193269 40193368 54037035 54037034 54037133 99 tttatttaaaatCTTTAGTGGGCATTATTGGAG---------TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTT ......x....x.x.--.....xxx:x......---------..:...--......:::.:.....::...x:..:..xx.:.::x.................:.... 15M2I16M9D6M2I58M 70/95 73.7% 99/94230402 0.0% 13/95 13.7% 22429874 NA +3339 chr4 + 190214555 62623176 62623175 62623239 64 AAAGGATGTTATTTTCTTTTTCTTTTCTATTCTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTT chr4 - 94230402 69513201 69513200 69513264 24717139 24717138 24717202 64 AAAAAAAGTTATTTTCTTTTACCGTTTTACTGTTTCCTCTCCTTTTTCCTCCCTCTTTTCCTTT ...::.x.............x.:x..:..:.x....:...:...:...:..::.:....::... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -6890025 -87340377 +3043 chr4 + 190214555 62623203 62623202 62623267 65 TATTCTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTAGAGGGACTCTTGCTCTGTT chr4 - 94230402 76182407 76182406 76182471 18047932 18047931 18047996 65 TATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ...x....:..:x..x.....xx:.......x............x...:::.xxx...:...... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% -13559204 -80671198 +3152 chr4 + 190214555 62650059 62650058 62650156 98 ATTTCCTGCCTGTTAATTTCATCATCTCTGTCACTTCTGGGTGTTTTAATTGACTATTTTTCTTTATCTTCTGACTCTTATTTTTCTGATTCTTTGCC chr4 - 94230402 35240442 35240441 35240539 58989864 58989863 58989961 98 ATTTTCTCCCTTTCAATTTCACTGTTGTTAAAGTTTATCTGTGTTTTACTCATTTATGTGTTTTTATTCCGTGTTTCTTTTTTTTCTGCCTCTTTCCC ....:..x...x.:.......:::.:x:.:xx::..x.xx........x.::x:...x.x.:.....:::x..x:....x........x:.....x.. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 27409617 NA +3134 chr4 + 190214555 62654076 62654075 62654126 51 AATAACACAAAATTTAAGATAAAGTATGGAAAACAAAAATTACAGTCTATT chr4 - 94230402 3431346 3431345 3431396 90799007 90799006 90799057 51 AATAACACATGATTTACAGTAAAATAGGAAAAACAAAATTTGCAGTCTATT .........x:.....x::....:..x.:.........x..:......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 59222730 NA +3082 chr4 + 190214555 62701258 62701257 62701332 75 AGGAATGTATTACTATTAAAGGAAAACTATAAACCATAAGAGCATTGATCAATGAAAGAGTAGACTGGAGAACAG chr4 - 94230402 63932296 63932295 63932370 30298033 30298032 30298107 75 AGGAATTTTTTCTTATCAAAGGGAAATTAAAAACAAACAGGCCATTAGTTTGACAAAGAGCAGAATGAAGAACAG ......x.x..x:...:.....:...:..x....x.xx..:x....::.:x:xx......:...x..:....... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -1231038 -92999364 +3148 chr4 + 190214555 62707368 62707367 62707426 59 TACATATATATATACATATATATATACACACATATATATACACACACACTCAATATGGA chr4 - 94230402 28470366 28470365 28470424 65759979 65759978 65760037 59 TACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAAGTAGA .......:....:...x.:..:...:......:...:....x....x.:::..x:.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 34237002 NA +3379 chr4 + 190214555 62726278 62726277 62726347 70 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCATGTAGCTGGAACTATAGGCATGTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...........::x...x.xx.x........::..x.............:.--.:..::....::.. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 44529139 NA +3108 chr4 + 190214555 62741932 62741931 62742065 134 ATATATAGTTATAGTTATATATATAGTTATAGTTATATATAGTTATAGTTATATATATAGTTATAGTTATATATAGTTATAGTTATATATATAGTTATAGATATATGTATATATACAAACACACACACATATAA chr4 - 94230402 84339114 84339113 84339244 9891159 9891158 9891289 131 ATATCTCCTTCTGTTTATCTCTAC---TAAAGTTCTGCAAAGCTTTGGACATTTCTGGAATTTGAATTATTGATAGAAATGATCATGGATATACATATATAGGTATATAGATATATAAACACACACTGATGCAA ....x.xx..x.:x....x.x..:---..x....x.::.x..:.x.:.x:..x.x.:x.:..xx.:....xx....xx..::.:..:x.....xx....x.x:...:..x.....:..........xx..::.. 24M3D107M 83/131 63.4% 131/94230402 0.0% 3/131 2.3% -21597182 -72633220 +3213 chr4 + 190214555 62756442 62756441 62756578 137 GTGACGTATTTTCTTTTTTCCTTCAGAAAAGTGATACAGTTTTTACTTTTTCAGTTGTTAAAAAAAAGCTAAGCTTCAATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAACTTCAATATGT chr4 - 94230402 19559237 19559236 19559343 74671060 74671059 74671166 107 GTAACTTATTTAACTTATTCCTTC----------------TTCTGCATTTTTAATTTTT--------------TTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ..:..x.....xx:..x.......----------------..:.:.x....:.:..x..--------------:..x:x.:.x.x.x.x...............:..............:.xx...:..:x:...:. 24M16D19M14D64M 77/107 72.0% 107/94230402 0.0% 30/107 28.0% 43197205 NA +3521 chr4 + 190214555 62756487 62756486 62756612 126 CTTTTTCAGTTGTTAAAAAAAAGCTAAGCTTCAATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAACTTCAATATGTAAGATTTACATTTATTAACATACCCTTAGCTTTA chr4 - 94230402 9151817 9151816 9151933 85078470 85078469 85078586 117 CTTTTCCAGTGATGTAACACAATCT----TTCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATA--TTAGGAGTGAAAAGT---CCTTTAATGGTGAATTCTTAACTTTA .....:....x:.xx..x.x..x..----.......:x.x.xx................:......x....x.:......--..x::x:..x..::.---.x....x.::::x.::....:..... 25M4D51M2D15M3D26M 82/117 70.1% 117/94230402 0.0% 9/117 7.7% 53604670 NA +3538 chr4 + 190214555 62756527 62756526 62756574 48 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAACTTCAAT chr4 - 94230402 89821282 89821281 89821329 4409074 4409073 4409121 48 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAAT .........x.x.......................:..:.:.:..... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% -27064755 -67165647 +3139 chr4 + 190214555 62783350 62783349 62783427 78 TTGCAACAACAACACCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGGTGAATCCCATAAGCATTTATC chr4 - 94230402 12139743 12139742 12139820 82090583 82090582 82090660 78 TTACAACAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAAATCACACCTAAATGTATC ..:...........x...x..x......:.::.....x.:...:..:..:.:::.::x:....x..:xx:x..x.... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 50643607 NA +3388 chr4 + 190214555 62795668 62795667 62795744 77 TGTGTACATATGTGTATATATGTATATATGTACATATGTGTATATATGTATATATACATATATACATAAGCAGAAAA chr4 - 94230402 37363040 37363039 37363115 56867288 56867287 56867363 76 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATAAAA ..........:x........::.::.:.x:..:..xx........:.....:...x..:.:.:.-...x.:.x.... 64M1D12M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% 25432628 NA +3933 chr4 + 190214555 62830008 62830007 62830136 129 ATCTTTTCTTTCTTTCTTTCTTTCT-----TTCTTTCTTTCTTTCTTTCTTTC-------------------TTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 9693683 9693682 9693835 84536568 84536567 84536720 153 ATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ..:...x.:.....xx.:....:..-----.:.:....x.:.x.......:.:-------------------...x..x.x.xx....:.:.::...:.:.::....:..::.:x...:..x.:...x..x...:........::.:.::... 25M5I23M19I81M 86/129 66.7% 153/94230402 0.0% 24/129 18.6% 53136325 NA +3595 chr4 + 190214555 62830046 62830045 62830174 129 TCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTT------TCTTCTTTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCTCTCTTTCTTTCTTTTTCT chr4 - 94230402 28459063 28459062 28459199 65771204 65771203 65771340 137 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTT ..x..:...:...x..xx...:x..x:.x.:...:x.x:.:...x...x:.:...::...:..:------...x:....x:...--.....::..:..:.xx..:..x:x:.:.:......:..x:.:.......:. 64M6I14M2I51M 82/129 63.6% 137/94230402 0.0% 8/129 6.2% 34370983 NA +3975 chr4 + 190214555 62830071 62830070 62830172 102 CCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCTCTCTTTCTTTCTTTTT chr4 - 94230402 83960510 83960509 83960611 10269792 10269791 10269893 102 CCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTT .....x..:x....:....:.:xx:x:......:..:x......x.x....::..xx:::...x.......x..:::....:..:..x..x.:.....x... 102M 68/102 66.7% 102/94230402 0.0% 0/102 0.0% -21130439 -73099963 +3066 chr4 + 190214555 62830081 62830080 62830186 106 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCTCTCTTTCTTTCTTTTTCTTTCTTTCTTTCT chr4 - 94230402 69728989 69728988 69729094 24501309 24501308 24501414 106 TTCATGCTAGCTATTCTTGTTTTTTTTTTAATTTTCTTTTTCCTAAATTCTGGTTTGTTTTTTTTCTCCCCCCTCTCTCCTTCCTAATTATACTCAAGCTCTTCCT ...x.x..xx..x.::..x...:...:..xx..:.:.:....:.xxx....xx:..x:...:.....::.:........:...:.xx..x.x..:xxx:....:.. 106M 66/106 62.3% 106/94230402 0.0% 0/106 0.0% -6898908 -87331494 +3478 chr4 + 190214555 62856043 62856042 62856187 145 TGAAAAGAACAAAA-------AAAAAAAAAAAAAG------------GAAGAAAGAAAGAAAAGGAAAG--AAGGAAAGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAGGAAAAGGCCTAAGCATTAACTAAATGTTAATGAATATTAAGGGAAGGAAATA chr4 - 94230402 60249453 60249452 60249618 33980785 33980784 33980950 166 TGAGCAGCACAAAATTTCCATAATAAAAAATGAGGTGAAGTGAACCTGAATGGGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTA ...:x..x......-------..x......x:.:.------------...x:::..x..:.....:.:.--...x.x.....:......x......x:...xx.....x....x:.....::x:xx...xx...x.....x:x.x::.xx..:...x:..:..:.. 14M7I14M12I22M2I95M 97/145 66.9% 166/94230402 0.0% 21/145 14.5% 2606590 NA +3129 chr4 + 190214555 62887944 62887943 62887999 56 TAAAAGCTGCAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAAGAGAAAAAAAAG chr4 - 94230402 7711348 7711347 7711403 86519000 86518999 86519055 56 TAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAG .......x.x....:...........:......xx....x..:....::.:::... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 55176596 NA +22853 chr4 + 190214555 62907749 62907748 62908475 727 CTGTTAAATCATTCTAGGTAATAATCTGTCTTGGAAAAGCTCATTATATGGGGGTTTAATGTACAGAAAAATAAATTT-------ATAAAATTCTCAACATG-ATGGTTTCTGAGAATTAA---------AGACATTTAACCCATCTATAAATCCATCTATAACTCAGTGGGTTAGAATAAATGATGGACATAAAAG---CTCTGTTAATCCAAAGTCACAAATACTAATGGACTGCTTGGTAGATTAACAGCAATCGTGGCATCTTGCTAGAACCATACTGTTTACTTCTATCCTCAGCTTGAAAGGATGCACAAAGCACATTCAGGTCTCTAAGAACATTTAATTCAAGTGGACAGAAACACATGAATATGCATTCAAGCTGACTATTGAACTTGCAAGCTTTATCTTTGAGCTGCTCTAGTGCTTCAAGCTGTGGAGATA----TAAAACTCTACCTTTGGGACAAGGAGTTGGAGCATCACCAAACTCTGATCAACAAAGAATGTAT-CCAGTGTTTTTTTTTTTTTCTTTACCAATGACAAAGAAAATTCTTCATTTTTATAACACTGTCTTTCCAGTTCTTAAATAATAGCATGCACAGGTGGTGTGAGGGATTACCATAGTAAAGCAACAAAAGGGTTATGAGCTTCCAAAGAACTATTATTAAATATAGGCACACTATAAAAAAATACTTTAGAATGATGACACCGTCAGGTACCATATTTTCTTTTTTTTTTTCTTTATTTCT chr4 - 94230402 44137664 44137663 44138380 50092023 50092022 50092739 717 CCATTACCTCATCCTGAGTGACTCTCTGGGATGATAAAACCCATCTTATTTGGACTTA--TTACTGAGAAATAGACTTCTAAGGCATAAGGTTCTCCAGATGGATGCTTTTTGGGAATTAGTTGAATAAGAGAGATTTAA------------TCCATCCAACAGTCAGTACACTTAAATACATGATGAACATAAAAAACTCATTGCTAATCCAAAGTGACAGGTACTAATAGGGTACTTAGTGGATTAATAGCTGGCATGCTATGTTGCTAGGATCATGCTGTTTATTTCAATCACGTGCTTGAATGGATGCAGAAAATAAACTCACTCCCTTAGGCACATTTAATTTAAGTGGACAAAATC-CATGATTGTACATCTATGAAGGCAATTGAAACTGTAAG-TTTATCTTTAAGATGTCATATTACCTCAAGCTCTTGAGAAAAGAGTAACAAACTAATTTTGGAA---------GAACTATCACA-----CTGTTTCACATGGAGGTTTTGCTGGTTTTGATAGTGCTACCTTT-----TGGCAAAGAGAATTTTTCAGCTTTATAGCACTGTCTCCCCAGGTCTTAATTAATACAGTGCACAGGTGGCATACAGGATACCCACAGTAAATCACATAAAGGGTTATGAGTCTCTGAAGAACTGTTATTAAAGATAGTCGCATCATAAAACAATAGGCTAGAAGGATTAAACTGTCACACACTATCCATTTCAGTTGTGTCTTTTCATGTCT .::...xx....:..::..:.:xx....xxx..:x...:.:...:x...xx..::...--x...x..:.....:.:..-------....::.....x.x...-...x...:..:......:---------...x......------------......:.xx.x.....:x::.x:....x......:........:---.x:..:...........x...::.......:.:x.:...:..:......:...x:x.:..x:..x.......:.:...:.......:...x...x:xx.......x.......x...::.x.:...xx:.::..:.x..........:.........:..x.-.....x.:.:...::.x.xx.:.x......x:..:...-.........:..x..::x..x.:.:.......x.x....x.----...x.xx...x:.....:.---------.:.x:.....x-----...x.:x...x:..:xx.x.-.::..x..xx.xx.x:.x:....-----..:......:....:....x:......:........::....x......x.....xx:...........::.:x:....xx...:......x..xxx.............::..::.......:........x....x.:..::......x....xx:.....x...x.x..:....x::..:..x:x..::xx..x.x.:.:..:..x... 58M2D18M7I17M1I18M9I10M12D45M3I162M1D38M1D41M4I19M9D11M5D20M1I23M5D212M 482/692 69.7% 717/94230402 0.0% 60/692 8.7% 18770085 NA +3521 chr4 + 190214555 62955384 62955383 62955474 91 ATATATATATTTATTTCTACACATTGTGCTGTATATATATGTGTGTGTGTGTGTATATACATATATACGTATACATATATACACACACACA chr4 - 94230402 70982597 70982596 70982680 23247723 23247722 23247806 84 ATATATATATTTATTCATGTAACTTTTTTCCT-------TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...............:x.::.xx..x.x::x.-------...........:...:.:.......:.x.:..x.::.:.:.:..:....... 32M7D52M 60/84 71.4% 84/94230402 0.0% 7/84 8.3% -8027213 -86203189 +3248 chr4 + 190214555 62955413 62955412 62955505 93 TGTATATATATGTGTGTGTGTGTGTATATACATATATACGTATAC--ATATATACACACACACACACACATATATGTGTAAAGGA---AAAAGACATT chr4 - 94230402 8395791 8395790 8395888 85834515 85834514 85834612 98 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATT ...:...:.:..::.:x:::...:.x..:.:..:...:.x..:.:--...:.:.............x...:.x...x:....::.---...xx..... 45M2I38M3I10M 63/93 67.7% 98/94230402 0.0% 5/93 5.4% 54559622 NA +3723 chr4 + 190214555 62955413 62955412 62955497 85 TGTATATATATGTGTGTGTGTGTGTATATACATATATACGTATACAT--ATATACACACACACACACACATATATGTGTAAAGGAAA chr4 - 94230402 8395789 8395788 8395875 85834528 85834527 85834614 87 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ...:.:...:....::.:x:::.....x.......:..:.:x.....--...:...............x.:.:.x:..x.x.::... 47M2I38M 60/85 70.6% 87/94230402 0.0% 2/85 2.4% 54559624 NA +3032 chr4 + 190214555 62955415 62955414 62955461 47 TATATATATGTGTGTGTGTGTGTATATACATATATACGTATACATAT chr4 - 94230402 81378297 81378296 81378343 12852060 12852059 12852106 47 TAAATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGAT ..x......:........x....::..........:...x....x.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% -18422882 -75807520 +3191 chr4 + 190214555 62955416 62955415 62955476 61 ATATATATGTGTGTGTGTGTGTATATACATATATACGTATACATATATACACACACACACA chr4 - 94230402 49414744 49414743 49414803 44815600 44815599 44815659 60 ATTTATAT-TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA ..x.....-.......:......x.:.x.....:..::..x.....:..::........:. 8M1D52M 47/60 78.3% 60/94230402 0.0% 1/60 1.7% 13540672 NA +3773 chr4 + 190214555 62955422 62955421 62955499 78 ATGTGTGTGTGTGTGTATATACATATATACGTATACATAT----------ATACACACACACACACACATATATGTGTAAAGGAAAAA chr4 - 94230402 8395788 8395787 8395875 85834528 85834527 85834615 88 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ........:......:...x....:...x:::...::...----------...................x.:.::x:.:..x:..... 40M10I38M 59/78 75.6% 88/94230402 0.0% 10/78 12.8% 54559634 NA +3255 chr4 + 190214555 62980180 62980179 62980218 39 TCTCAAAAAGAAAAAAGAAAAAAAAAAAAGGAGGAAAGA chr4 - 94230402 6438507 6438506 6438545 87791858 87791857 87791896 39 TCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGA ...:...........:....................:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 56541673 NA +3188 chr4 + 190214555 62980185 62980184 62980234 50 AAAAGAAAAAAGAAAAAAAAAAAAGGAGGAAAGAATGTCTGTTCAGTAGA chr4 - 94230402 15951015 15951014 15951064 78279339 78279338 78279388 50 AAGGGAAAAAAAAAAAAAAAAAAAGGAGAGAGAAATATCAGCTCAGTAAA ..::.......:................::.::...:..x.:......:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 47029170 NA +3320 chr4 + 190214555 63096206 63096205 63096269 64 CAGAGAAACAGAACCAAGAGGGGGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629048 81629047 81629099 12601304 12601303 12601355 52 CAGAGCAATAGCAC------------TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .....x..:..x..------------.x..........:......................... 14M12D38M 47/52 90.4% 52/94230402 0.0% 12/52 23.1% -18532842 -75697560 +3139 chr4 + 190214555 63096230 63096229 63096269 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 44113915 NA +3102 chr4 + 190214555 63096232 63096231 63096267 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -18532832 -75697570 +3353 chr4 + 190214555 63096232 63096231 63096271 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 44113917 NA +3576 chr4 + 190214555 63096234 63096233 63096300 67 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTATTTT chr4 - 94230402 18982315 18982314 18982364 75248039 75248038 75248088 50 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG-----------------GAAGGATTTATTTT ....................................-----------------..::.......... 36M17D14M 48/50 96.0% 50/94230402 0.0% 17/50 34.0% 44113919 NA +3102 chr4 + 190214555 63096236 63096235 63096271 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -18532828 -75697574 +3124 chr4 + 190214555 63096236 63096235 63096270 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982349 75248054 75248053 75248088 35 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 44113921 NA +3051 chr4 + 190214555 63109016 63109015 63109092 77 AAAAAAAAAAAAAAAAAAAAAAAAAAAGTTGTGAGGAGGGAGGGAGTGGGGAGGATCCTAAAAGCAGTAAGAGAAAA chr4 - 94230402 83829325 83829324 83829401 10401002 10401001 10401078 77 AAAAAAAAAAACAAAAGAAAAAAACCATGGATGAGAAAGGAGAGAATAATGTGGCTACTAAAAATGTCAGTAGAAAA ...........x....:.......xx.xxx:....:.:....:..:.::x.x..x.x......:::x:.:x...... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% -20720309 -73510093 +3420 chr4 + 190214555 63113869 63113868 63113952 84 TTACTTTTAACTATAATTTTTGTATTATTTTGCTTGTGTTTTTTTTTTTTTTTT----------------GCATCAATTA--AAAGACACTCACTTTTAAAT chr4 - 94230402 72269637 72269636 72269738 21960665 21960664 21960766 102 TCACTGTTAGCAATAACTTCAGCATTATTTTGTTTTTGTTTTTTTTTCTTTTTTTCTTCATAGCACTGAAGCACTGATGAGGAAAAATACTTACTTTTTGAT .:...x...:.x....:..:x.:.........:..x...........:......----------------...:::..x.--...:.:...:......x:.. 54M16I10M2I20M 64/84 76.2% 102/94230402 0.0% 18/84 21.4% -9155768 -85074634 +3215 chr4 + 190214555 63194045 63194044 63194120 76 TATATTAAAACTATTTTTTTTAGTTTCTAATGGAAGGTTTTTATTTGGTTCTATGAATAGTCATTGTGTTTATTAT chr4 - 94230402 71280414 71280413 71280489 22949914 22949913 22949989 76 TACATAAGAGTTATTTTTATTATTTTCTAATGTGAGAATTTTGCTTGGTTTAATTAAGAGATGTTGTATTGCTTAT ..:..x.:.::.......x...x.........x:..:x....::......:x..x..x..x::....:..xx.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -8086369 -86144033 +3183 chr4 + 190214555 63200834 63200833 63200916 83 TCTCCAAAAAAAAAAAAAAAAAAAACAAAAAAGGAGAGACTGGCCTAGCCTCCCAGCTACATCTTGTTCCCATGCAGGATGCT chr4 - 94230402 10005045 10005044 10005127 84225276 84225275 84225358 83 TCTTCCAAAAAAAAAAAAAAAAAACCCAAAAAACCCAAATTGATTTAATCTTACATCTTTTCCATGTTCCCCTTCAGAAAGCT ...:.x..................x.x.....:xxx.:.:..:::..::..:x..x..x:x:.x.......x.x...:.x... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 53195789 NA +3258 chr4 + 190214555 63218516 63218515 63218573 58 GGTCTTTTTTGTTGATGTTGTTGTTGCTTTCTGTTTCTTTGTTTTTCTTTTAACAATC chr4 - 94230402 66916764 66916763 66916818 27313585 27313584 27313639 55 GGTTTTTTTTGTTG---TTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTCATAATAATC ...:..........---.........:.........:..xx....:..:x...:.... 14M3D41M 46/55 83.6% 55/94230402 0.0% 3/55 5.5% -3698248 -90532154 +3628 chr4 + 190214555 63228861 63228860 63228967 107 AAAAATAAATAAATAAAAAAGAAGTATAATATCCCCTTAAAATAGATT----AAAAGTATACACACACACACACACACACACACACACACACATATATATGTATACATATA chr4 - 94230402 38535839 38535838 38535949 55694454 55694453 55694564 111 AAAAAAAAAAAAACAAAAAACAAACCTTGAGCTATTTTACGGCAATTTTCTCAACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA .....x...x...:......x..::x.x:x:::x::...x:::.:x..----..x.:....:......::...::x:x.:.....:........:.:.......:....:. 48M4I59M 69/107 64.5% 111/94230402 0.0% 4/107 3.7% 24693022 NA +3177 chr4 + 190214555 63228926 63228925 63228976 51 CACACACACACACACACACACACATATATATGTATACATATATACATATCT chr4 - 94230402 87372747 87372746 87372797 6857606 6857605 6857656 51 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT ..x...........x..........x....:....::.::....:..x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -24143821 -70086581 +7750 chr4 + 190214555 63289933 63289932 63290088 156 TTTGAACTTAAATAGCCAAAGAAAAAAGAAAATAATTTAGCTGGTGATTTCATGGTCCTGTTTTTCTTCATTATCCCTTGTTGAGTCTCCTACTGTTTATAAAATTGAAAAATCATGCTGAGCTGAATGTCCAATGGCCTGAATAAAATTGATTTT chr4 - 94230402 43974385 43974384 43974540 50255863 50255862 50256018 156 TTTGGATTTAAATGGCATAGGAATCAAAAGTGGATTCTATCTGCTGATTCTATAGCCCTGTTTTTCCACATTGTTTCTTCCTGAGCCTCCTACTGTTTATAAAATTGGAAAATCAAGCTGAGCTGAATGACCAATACCTTCATCATGATTGAATCT ....:.:......:..xx.:...xx..:.:x:x.x.:..x...x.....::..:.:..........:x....:.::...x:....:.....................:.......x.............x.....:x.:.x.x:.x:.....x.:. 156M 114/156 73.1% 156/94230402 0.0% 0/156 0.0% 19315548 NA +3060 chr4 + 190214555 63325073 63325072 63325133 61 GTTTAAATATATATACATACACACACACACACACACACACACACACACACATATATATATA chr4 - 94230402 66904841 66904840 66904901 27325502 27325501 27325562 61 GTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA ....xx......:...:..........:...........:.:x:.x::x..x:.:....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -3579768 -90650634 +3308 chr4 + 190214555 63325074 63325073 63325152 79 TTTAAATATATATACATACACACACACACACACACACACACACACACACATATATATA-----TATACTACAGTGTGTGAAATA chr4 - 94230402 8395815 8395814 8395898 85834505 85834504 85834588 84 TTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATA ....x....:...:.x....:xx.:.................x.....x..:x...x.-----:.x......x.x..xx..... 58M5I21M 60/79 75.9% 84/94230402 0.0% 5/79 6.3% 54929259 NA +3086 chr4 + 190214555 63358991 63358990 63359050 60 TAAGATATACATATATTTACACACACACACACACATACACATACACACACACACTCCCAT chr4 - 94230402 93909771 93909770 93909830 320573 320572 320632 60 TGAGGCTTGCACACTTGTACACATATGAACACACGTATACATACACAGACACACCCCCAT .:..::x.:..:.:x.x......:.::x......:..:.........x......:..... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% -30550780 -63679622 +23557 chr4 + 190214555 63389919 63389918 63390568 650 TTTGAGACCAGTTGTTCTTAGAAATAATAATATAAATAAAAACTCCTTACTGATATATGGAGACAATTAAGCCTATTTTAAATAATTTCATTAATAATGTAAAATGACTTCTGTTCATTCCTATCCTA-----------TTACATCATTAAATATTATTGAGTTAGGTCCTGACATTTTATTCAAAATTATGTTTCTGGCATTTAAGTATTCAGCTCTAAATGTTAAGGATGCCAATTATGTGAGCATCCATCTTTTTCACTCTGGTCTCCCATCAAACATTAATGGTGGAAGTGTTAATTCATTTCAAGTAGTCTGAAATATCTGCCCTGAAGAAGGCTGACACTCTACAAGTGCT---CTGACAACCTCTGGTAAGTAATGACTCTTAAAAATATCTCAGTAAATTCAACTCACTCCTAGAGGCATTTTAAATTATGTGTCATTAAAATGTAATGCCTTCTCAAATGACAAGGTCATGCCAAAAACCAAAACTACACTGTATTTTTTTCTGAAACATACCCACAC-CAATAAAAATGTTACAACTTACACTTCAAAACAG-TAAAGATAAGTCGTGCCATATTTAGAGGC----------ATGTAGTAATCAAGGTAAATTGTTATTTATAGCAACCATAAATTTATACTAT--GATACCACTCTATGTGAGAAAA chr4 - 94230402 43998818 43998817 43999484 50230919 50230918 50231585 667 TTTCAGAATATCAGATCTCAGAAATA-TATTACTAAAACAAAACCCCTGCAAA-ACACAATTATTATTCAACTCATTTTAA-CAATTCAATAAATGCAGTGCAATGACTTCCGTTAGCTATTCTCCTAGCCAAGGTCTACTACATCATTAAATATTATTGAGTTGGG-CCTGCCATTTTACTTGAAATTATGCGCCTGGCATTTTAGTCTATGGCCATAAATGCTGGAAATGTCAGTTATATAAGCATCCATCTTTTTCACTACTGCCTCCCATCAAACATTAATGGTAGGAGCTCTAATCCATTCTACACAGTCCAAGATATCTACATTTGCTAGGAAAGGAACTGTAACAGAGCAATACTGACAACTCACAGTAAGTAATTACTCTTAGAAATATCTCAGTAAACTCAATTTGCTCCCAGAGGTCTTTTAAATTATATCTCGTTAGAGTGCAATGCTTTTTCAAACGACAAGGTCACACAAAAAAGCAAAACTCTATTTCATCTTTATCAGAGCTTTACCCCCCCACAATAAAACTGTTATAACACATAATTCCAACCAGATAGAGATACTGTGTTTTACTGTTAGAGTCCAGAAAAGCTATAGAGCAAGCAGA-------GTTGTTTACAGTCACAATAAATCTGGAATATTGTATAGCATTCTAGGTGAGGCAA ...x...x:.x:x.x...:.......-..x..:x..x.x...x:..:.:.x:.-.:.:::xx.:x...x.:.::.......-:....:x..x...:xx..:x.........:...x::.x:.x.....-----------:........................:..-....x.......:.::........:x:.........x...x.x::..:x......:.::::...:..:....:.:...................x:x.:.....................:.:..:x:....:....::.x::....::.:......:.x:.x:xx.:.:xx.:x...x..xx..x..x---........::x::.........x.......:...............:....:.::....:.....:x...........:.x..:...:.:..:.....:..:.....:..........::.x.....x.......x:.:.x:..:...x..x..:x:x.....x.x.-........x.....:...x:.:.x...x..x...-..:.....xxx:..x::.:xx......x.----------..:x..:..x..::-------...:....:..:x..x......:.:x.x...--x...x..:....x.....:x.. 26M1D26M1D27M1D46M11I28M1D189M3I167M1I34M1I29M10I14M7D31M2I22M 449/639 70.3% 667/94230402 0.0% 39/639 6.1% 19391101 NA +3393 chr4 + 190214555 63417573 63417572 63417669 97 ATTTGTAGGTATAGA--------------GCCATCAGAACAGGTATATATATATATATATATATATATATATACACACAC----ACACACACACACACACATACACACACACATA chr4 - 94230402 8395756 8395755 8395870 85834533 85834532 85834647 115 ATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .......x:..:...--------------.....xx.x::.x..:.::...x.:..:...x..:....:...:.x:...:----.................x.....x.::x... 15M14I51M4I31M 70/97 72.2% 115/94230402 0.0% 18/97 18.6% 55021817 NA +3195 chr4 + 190214555 63417596 63417595 63417651 56 AACAGGTATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395807 8395806 8395862 85834541 85834540 85834596 56 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....x....x..:....:...::x..:..xx...:...............x..... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 55021789 NA +3054 chr4 + 190214555 63417597 63417596 63417655 59 ACAGGTATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:::..:...x..:....:...::x..:..xx.:.................x..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 55021793 NA +3486 chr4 + 190214555 63417597 63417596 63417678 82 ACAGGTATATATATATATATATATATATATATATACACACACACACACACACACACACATACACACACACATATATATACAC chr4 - 94230402 88147181 88147180 88147259 6083144 6083143 6083222 79 ACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATATAGGGAGAAGCATATATCAACAC ...x...x:x..............:.x.:.:...:.:.............---..:.:...x:x.x.x:.......xx.... 50M3D29M 59/79 74.7% 79/94230402 0.0% 3/79 3.8% -24729584 -69500818 +3101 chr4 + 190214555 63417602 63417601 63417661 60 TATATATATATATATATATATATATATATACACACACACACACACACACACACATACACA chr4 - 94230402 8395811 8395810 8395870 85834533 85834532 85834592 60 TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...x..:....:...::x..:..xx...................x.....x..:x.:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 55021791 NA +3047 chr4 + 190214555 63417619 63417618 63417683 65 ATATATATATATACACACACACACACACACACACACATACACACACACATATATATACACACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:..::..........:...........:.:x..x::x..x:::....:.xx..:..:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% -3487228 -90743174 +3147 chr4 + 190214555 63417621 63417620 63417686 66 ATATATATATACACACACACACACACACACACACATACACACACACATATATATACACACACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..:::.........:...........:..x:.x::x..x:.:....:.xx..:..:... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% -3487226 -90743176 +3289 chr4 + 190214555 63417623 63417622 63417688 66 ATATATATACACACACACACACACACACACACATACACACACACATATATATACACACACACATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::.........:.............:x:.x::x..x:.:......xx..:..::.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% -3487224 -90743178 +4455 chr4 + 190214555 63448217 63448216 63448395 179 CCCTTTTTCCTTCCTTTCCTTCCTTTCCTTCATTTCCT-TCCTTTCCTTCATTTGCTTCCTTTCCTTCTCTTTCT-------TTTCTTTC------TCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTT-------CTTTCTTTCTTTC---TTTCTTTCTTTCTTT---CCTTTTTCTTTCCTTCTTTCTTT chr4 - 94230402 32948234 32948233 32948439 61281964 61281963 61282169 206 CCATTTCTGTTCTCTGTCGTTCCATTTATTTATTCCTTACCCTGTCTTTCCTTTGCTTCTAGTATTTCTCTCCCTCCACATATTTCCTTTAAGGGATTTTTGTTCCTTCTATTCTTGTCTTGGTAACTTTCTCATTTTCATTATCAGTGTTTTGTTTCCTTCAGGTTTCATCTGTTCTTTTGCCCTTTCTCTTCCCACTTTTATTT ..x...:.x:.::..x..x....x..:x..:...:.:.-:...x..:...x........:xx.x:......::..-------....:..:------.:...x..:...::x.....x....xx.xx......:x:....x..-------:...x....:...---....x.::x......---.....:....:..x::...x... 38M1I36M7I8M6I46M7I13M3I15M3I23M 124/179 69.3% 206/94230402 0.0% 27/179 15.1% 30499983 NA +3097 chr4 + 190214555 63448267 63448266 63448342 76 TTTGCTTCCTTTCCTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ...x:..::..:.x..:...:.x.xx:xx...:...x.x.......::::.............::.:......x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 7296717 NA +4122 chr4 + 190214555 63448267 63448266 63448407 141 TTTGCTTCCTTTCCTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTC-----------TTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTT--CTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCT chr4 - 94230402 4165265 4165264 4165420 90064983 90064982 90065138 156 TTTGGTTTGGTTCATTTTCCTTCTTTTCTTCCACTTCTTCACTTATTAAATATTTTTTATCTCAACCCACATGTTTTCTTTACTGCCTTTTTAAACTTTATTTGTTTCCTTAACTTTTTTGCTCTCTTCTTCCCCTTTTTCCTTGTCTCCTGTCCT ....x..:xx...x..:..:..........:.x...::.:x...x:.xxx.x..:...x.:..-----------.......x:.x.:..:..--x....x...x....:..--....:..x.::.:.....:..:.:....:..x....::x.:.. 63M11I18M2I17M2I43M 96/141 68.1% 156/94230402 0.0% 15/141 10.6% 59283002 NA +4291 chr4 + 190214555 63448268 63448267 63448437 170 TTGCTTCCTTTCCTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCT---CTCTCTTTCTTTCTTCTCTTTCTTTCTTTCTTTTCTTGAG chr4 - 94230402 45185586 45185585 45185754 49044649 49044648 49044817 169 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTT-CATTCTTTCTTTTCTTTC---ATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGG .....:x:.....:...:::.xx.:..xx.:.::.x...-.x................---x...:.:x.:..::..........xx:....:.:..::.:x:..xx.x:....:x.:x::.x.......---.x.:.:.xx.:....x.::..:.:.....xx.:.:..::. 39M1D18M3D69M3I40M 104/166 62.7% 169/94230402 0.0% 7/166 4.2% 18262682 NA +3555 chr4 + 190214555 63448279 63448278 63448354 76 CCTTCTCTTTCTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 22629302 22629301 22629377 71601026 71601025 71601101 76 CCTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT ....:...............x:x...x.x:.:x:.:......x..:x...x..::..x...:...:..:....:.. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 40818977 NA +3453 chr4 + 190214555 63448311 63448310 63448392 82 TCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTTTCTTTCCTTCTTTC chr4 - 94230402 91731746 91731745 91731827 2498576 2498575 2498657 82 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTC .:.:..x.........x::..x.....:...:::...:......::....xxxxx.:....:.x...:..:.:....x.:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% -28283435 -65946967 +3093 chr4 + 190214555 63448366 63448365 63448434 69 TTTCTTTCCTTTTTCTTTCCTTCTTTCTTTCTCTCTCTTTCTTTCTTCTCTTTCTTTCTTTCTTTTCTT chr4 - 94230402 27426810 27426809 27426878 66803525 66803524 66803593 69 TTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTT ...x.x....x..:::.:.:.x.:.x..x:.:...::...::.......:...:.........:.x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 36021556 NA +3113 chr4 + 190214555 63449667 63449666 63449780 114 TATATATATATACACACACACACACACACACACACACACACACACACACATATATACACACACATATATACGTATATATGTACGTATGTATACATATATATATATATATGACCT chr4 - 94230402 4417346 4417345 4417458 89812945 89812944 89813057 113 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAACT ..x.:...................x:x...:..:..::x:x::x::.....:...xx.x:..:x..x...:::.:....x..:x...:.::-..:.x.:.:xx.:....:.x.. 91M1D22M 69/113 61.1% 113/94230402 0.0% 1/113 0.9% 59032321 NA +3025 chr4 + 190214555 63449670 63449669 63449735 66 ATATATATACACACACACACACACACACACACACACACACACACACATATATACACACACATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::.........:...........:.:x:.x::x..x:.:......xx..:.:::.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% -3455177 -90775225 +3078 chr4 + 190214555 63449690 63449689 63449776 87 ACACACACACACACACACACACACACATATATACACACACATATATACGTATATATGTACGTATGTATACATATATATATATATATG chr4 - 94230402 4417349 4417348 4417435 89812968 89812967 89813054 87 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG ...:.:.:.............x:x.....:::.::x:x::x.::.:.:....xx.x.:.:x..x:......:....x...x...... 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 59032341 NA +3087 chr4 + 190214555 63449701 63449700 63449775 75 CACACACACACACACATATATACACACACATATATACGTATATATGTACGTATGTATACATATATATATATATAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x:..:::..::......:.......x.....:.::.x.x.:.:.:.:.:...x.:...:.:x....:.:.:. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% -8180430 -86049972 +4092 chr4 + 190214555 63449703 63449702 63449798 96 CACACACACACACATATATACACACACATATATACGTATATATGTACGTATGTATACATATATATATATATATGACCTACTAAGTATTTGTGATGT chr4 - 94230402 71630131 71630130 71630226 22600177 22600176 22600272 96 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTGCTGT ...x:..:::..:::.............x......:...x.x....:.:....:.x:::..:.:x....:.:..x.:.x..:.:.x.:....x... 96M 64/96 66.7% 96/94230402 0.0% 0/96 0.0% -8180428 -86049974 +3029 chr4 + 190214555 63449707 63449706 63449753 47 CACACACACATATATACACACACATATATACGTATATATGTACGTAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x.......:.:.x..........x.........:..:...::... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -23923040 -70307362 +3159 chr4 + 190214555 63467584 63467583 63467644 61 ATATATCTACACACACACACACACACACACACACACACACACACACACACACAGTTGAATA chr4 - 94230402 8395810 8395809 8395870 85834533 85834532 85834593 61 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:...:....:.:::.::.x:...:xx.:.................x.....:x...... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 55071774 NA +3167 chr4 + 190214555 63476435 63476434 63476534 100 TTGTGTATTTTTTTCTTTTAAAATTTTAAAAATTTTTCTTTTTTTCTTTTCTTTTGAGACAAGTTTTCACTCTGTCACCGAGACTGGAGTATAGTTGTGT chr4 - 94230402 67307723 67307722 67307822 26922581 26922580 26922680 100 TTGTTTGGTTTTTTTTTCTGAATAGGTTAAAGTGCTTCTTTTTTTCTTTATTTTTAAGCAGAATTTATACTTTGGACCTGAAATAAGAGTTCATTTTTGT ....x.:x......:..:.:..xxxx.x...:.x:..............x:....:..xx:.:...x:...:..xxx.:..:.:x:....x:.x..x... 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% -3831288 -90399114 +3303 chr4 + 190214555 63511395 63511394 63511474 80 TTAAACTAAAGAGCTT-CCACACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTATCATTAGAGTTAACAGGCAACC chr4 - 94230402 45758364 45758363 45758443 48471960 48471959 48472039 80 TTGACCCAAAGAAAGTACTACATGGCAAAAAGAAAAAGAAAA-AAGAAAGAAAGAAATACCAGTGTGGTTAAAAGGTAACC ..:.x.:.....:xx.-.:...::.......:.....:....-..:...:......x..:..x.:x:.....x...:.... 16M1I25M1D38M 58/79 73.4% 80/94230402 0.0% 2/79 2.5% 17753031 NA +3005 chr4 + 190214555 63529336 63529335 63529397 62 AAACAAATTACAGTATGTGTGTGTGTGTATATATATATATATATACATATATGTATATATAA chr4 - 94230402 52579760 52579759 52579821 41650582 41650581 41650643 62 AAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAA ...:..x.:.:.:x..::..........:................::.x..xxx.x..:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 10949576 NA +3070 chr4 + 190214555 63529357 63529356 63529405 49 TGTGTGTATATATATATATATATACATATATGTATATATAAATATATAT chr4 - 94230402 66471242 66471241 66471290 27759113 27759112 27759161 49 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT ......::.:....:..::.......:......:.x.:......:.... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% -2941885 -91288517 +3199 chr4 + 190214555 63561371 63561370 63561430 60 TTTATTGCATGCCTAAGATACTGTTTTTTTGAGGGTTTTTTTTGTTTGTTCTTTGTTTTT chr4 - 94230402 71439629 71439628 71439682 22790721 22790720 22790774 54 TCTATTTCAGGCTT------TTGTTCTTTTGTGGGTTTTTTTTGTTTGTTTTTTGTTTTT .:....x..x..:.------:....:.....x..................:......... 14M6D40M 46/54 85.2% 54/94230402 0.0% 6/54 11.1% -7878258 -86352144 +3002 chr4 + 190214555 63584956 63584955 63585022 67 AAAAAGTATGTTTCTGAATGTGTGTATATATATATATATATATATATTCAATGTATATATATTCAAA chr4 - 94230402 89821278 89821277 89821344 4409059 4409058 4409125 67 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGA ....x..:...x...xx:.....................:..:.xx:.....x.x.x..xx..:.:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -26236322 -67994080 +3145 chr4 + 190214555 63584966 63584965 63585019 54 TTTCTGAATGTGTGTATATATATATATATATATATATTCAATGTATATATATTC chr4 - 94230402 19559292 19559291 19559345 74671058 74671057 74671111 54 TTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTC ...:..x:.......:.:................:.x::...x.x.:....... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 44025674 NA +3054 chr4 + 190214555 63611147 63611146 63611192 46 TCTGTGTGTGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982305 18982304 18982350 75248053 75248052 75248098 46 tctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ...x.x.x.x.x..............x................... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 44628842 NA +3431 chr4 + 190214555 63611147 63611146 63611194 48 TCTGTGTGTGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982307 18982306 18982354 75248049 75248048 75248096 48 tctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x.x.x...x................................::.. 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 44628840 NA +3487 chr4 + 190214555 63611147 63611146 63611225 79 TCTGTGTGTGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGTTGATATCATAGAATCATAGAAGCTGAGAAT chr4 - 94230402 18982309 18982308 18982387 75248016 75248015 75248094 79 tctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTGATAATTTTGTGCCTGAGAGT ...x.x.....x............x.................::..::..x..x.::.::x.x:x.x.x:x......:. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 44628838 NA +3091 chr4 + 190214555 63611155 63611154 63611190 36 TGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ...x......:......................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -18017909 -76212493 +3079 chr4 + 190214555 63611159 63611158 63611196 38 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGTT chr4 - 94230402 81629066 81629065 81629103 12601300 12601299 12601337 38 TGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTT ........:.....x...................x... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -18017907 -76212495 +3664 chr4 + 190214555 63629868 63629867 63630016 149 TGAGAAAATATTTACAGACTATTCATGTTACAAGGCATTAATAACCAGAACATATATATATACACACACACATATATATACACATATATATACATATATACACATATATACACATATATATACATATATACACATACATATACATATAT chr4 - 94230402 27943496 27943495 27943628 66286775 66286774 66286907 133 TGAAAAAATATTTAGAATAGATTGA----ATATGGAACAAATAAA------------ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...:..........x.:xxx...x.----.:.x..x.:x.....x------------...x:..:....xx:.:..:.:.::..:.x:.:.:..x....:.....:...:::.x:......x..x..:.x.........x:...::.:. 25M4D16M12D92M 87/133 65.4% 133/94230402 0.0% 16/133 12.0% 35686372 NA +3075 chr4 + 190214555 63629917 63629916 63630025 109 ACATATATATATACACACACACATATATATACACATATATATACATATATACACATATATACACATATATATACATATATACACATACATATACATATATACACATATA chr4 - 94230402 89016090 89016089 89016198 5214205 5214204 5214313 109 ACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ....x.::..::........::x.::::.:......::.x..:....:.:::.x..:.:.:::..x.:.:x.:.::.:.:..:x..:.:.::x...:x::....x.::. 109M 59/109 54.1% 109/94230402 0.0% 0/109 0.0% -25386173 -68844229 +3033 chr4 + 190214555 63629957 63629956 63630020 64 ATACATATATACACATATATACACATATATATACATATATACACATACATATACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x...:.x.........:..:.:x..::x.::.:.x...:..:........:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 46109208 NA +3067 chr4 + 190214555 63629981 63629980 63630051 71 ATATATATACATATATACACATACATATACATATATACACATATATATACATACATATGATCAAACAACTC chr4 - 94230402 88029584 88029583 88029654 6200749 6200748 6200819 71 ATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATAGCATTAAAAAATTC ....x...:::.:x.x.:...:.x.:.......x............::...x.x...xx..:...x..:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -24399603 -69830799 +3278 chr4 + 190214555 63636595 63636594 63636764 170 GATATATTACTCT-CTGTGATTTCTAAATTCTGC-------------ACTTGCATTACAATTATTATATTATGACATGTATTTAATAAAATGAAATAAAATTAAATGTTGGAGTATTTCATGTGTTGTACAAAAAATATTCTAGTCCTTCTCATAAATATGCAGGTAAGTGATG--ATTGTTTATT chr4 - 94230402 14951000 14950999 14951179 79279224 79279223 79279403 180 GGTCTATCACTTTTCTGTGTTCTCT----TCTGCTTATGATGGGATAATTTGTTTTATAAATATTCTGCAATGTCATGTCTTTATTAAAAAAAGAGAAAAGCTAACATTGGATTGCATGAGCTGTCGCAAAGAACACATTCT--TCTCATTTATTATTCTGAAAGTAACATATAACATTGTCTATT .:.x...:...:.-.....x.:...----.....-------------.:...:x...:..x....x.::x...x.....x....x.....x:.:.x....x:x..::.....x.::x.x.xx...:.:.x.:..x.:.....--..::x:.:..x.x.x..x.:....xxx..:--.....:.... 13M1I11M4D5M13I95M2D30M2I10M 109/164 66.5% 180/94230402 0.0% 22/164 13.4% 48685595 NA +3058 chr4 + 190214555 63643288 63643287 63643327 40 TGTGTGTGTATATGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -26177994 -68052408 +3027 chr4 + 190214555 63643290 63643289 63643352 63 TGTGTGTATATGTGTGTGTATATATATATATATATATATATATATAATTTATTTGGGTGTAAA chr4 - 94230402 89821282 89821281 89821344 4409059 4409058 4409121 63 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGA .......:.x.x.......:...............:..:.xx:x:...:.x...:.x.x..:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% -26177992 -68052410 +3071 chr4 + 190214555 63663946 63663945 63664054 109 ATTTTTATTTTAAAGATGAAGAATCTGCAGTGCAGAGAAACTTTGACACTTCAAAGTCAAGAGAAGTGCCACTGGTAGACAGAAAATGAAAGAGAAAGGATGCAAGTTT chr4 - 94230402 89220520 89220519 89220613 5009790 5009789 5009883 94 ATTTTTATTTTAAAGATGGAGAATCTGTAGCATAGGGACACTT------------GGCGTGATGGGTG---CTGGTAAGCAGGCAAAGACAAACACTGCATAAATGTTT ..................:........:..:::..:..x....------------.x.:x..x::...---......::...:x..x..x.:.x.xx.x..:x.x.... 43M12D13M3D38M 67/94 71.3% 94/94230402 0.0% 15/94 16.0% -25556574 -68673828 +3349 chr4 + 190214555 63676844 63676843 63676909 66 GAGAAAAGTAAGAATACCTCTGCAGTGGAGAAATAGCACCTTTTTCAAATGATCAAAATTAACATC chr4 - 94230402 69781498 69781497 69781563 24448840 24448839 24448905 66 GATAAAAGTTAGAAAACTTATGAAATGAGAAAACAACATCGTTTTTAAATGTGCAAAATTAACATC ..x......x....x..:.x..x.:..:::...:.:..:.x....:.....xx............. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -6104654 -88125748 +3120 chr4 + 190214555 63705667 63705666 63705722 56 TACACACACACACACATATATATACACACACATATACACACACATACACATATGTA chr4 - 94230402 1470662 1470661 1470717 92759686 92759685 92759741 56 TACACACACACACACATATATATATCTCAACACATGCACAAATGTGCACCAATGTA ........................:x:xx...:..:....x.::.:...xx..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 62235005 NA +3383 chr4 + 190214555 63705681 63705680 63705760 80 CATATATATACACACACATATACACACACATACACATATGTATACATATATACACATGTGTGTGTGTGTGTATATATATA chr4 - 94230402 73121106 73121105 73121185 21109218 21109217 21109297 80 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATA ...::....x..:.............x.x::.::x:..::..:::...x:.....:x..:.:....x..::.....x... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -9415425 -84814977 +3090 chr4 + 190214555 63705700 63705699 63705754 55 ATACACACACATACACATATGTATACATATATACACATGTGTGTGTGTGTGTATA chr4 - 94230402 38535895 38535894 38535949 55694454 55694453 55694508 55 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ...:.:.....:::....:x.x.....:...:..........:...:..::..:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 25169805 NA +3238 chr4 + 190214555 63705706 63705705 63705759 54 ACACATACACATATGTATACATATATACACATGTGTGTGTGTGTGTATATATAT chr4 - 94230402 75495545 75495544 75495598 18734805 18734804 18734858 54 ACACAGATTCAAATGAATACATGTATACATATGTGTGTGTGTGTACATGTCTAT .....x.:x..x...x......:......:..............::..:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -11789839 -82440563 +3151 chr4 + 190214555 63766834 63766833 63766946 113 AAGTCAAGTATCTCTTACTTTGATATTAATAAACCCATTATTCTGTCAATGACACTCTTCCTTTCTTCTTCCCTTGGATAATTCTTGTTTTTTTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 64615222 64615221 64615333 29615070 29615069 29615181 112 AAATTACATGTCT-TGATTTTGATGTGCATAAAATATCTACTGAGTTACTACTATTACTTATCTTTAGTCCCTTTTGAGAATAGATGTTTTTTTTTTTTTTGTTTGTTTGTTT ..:.:.x:.:...-.x.:......:.xx.....x:xx:..:.xx..:.x.:x:.:.x:.:x.:.:.xx.:..:..x..x...xxx............x............... 13M1D99M 72/112 64.3% 112/94230402 0.0% 1/112 0.9% -848388 -93382014 +3191 chr4 + 190214555 63782856 63782855 63782905 50 TCTAAAATAGCAAAAAAAAAAAAAAAAAAAATAGAAAAGAAAAAAATTCC chr4 - 94230402 46124008 46124007 46124057 48106346 48106345 48106395 50 TTTAAAATAGTAGAAAAGAGAAAAAAAAATAGAGAAAAAAAAAAGGTTCC .:........:.:....:.:.........x.x......:.....::.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 17658848 NA +3025 chr4 + 190214555 63815692 63815691 63815752 61 TTCCTGTTTGTTTATTTGTTCTCTTACATGTTATTTTTTTAAAAAAATATTTTCCAGTTTT chr4 - 94230402 87319786 87319785 87319846 6910557 6910556 6910617 61 TTTTTGTTTGTTTGTTTGTTTTCCTACAAGTTAATTACTTAAAAATGCATATTGCTGCTTT ..::.........:......:..:....x....x..x:.......x::..x..x.x.:... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% -23504094 -70726308 +3210 chr4 + 190214555 63839798 63839797 63839895 98 ATCTCCTTTTGCCTACTTTTTTATGGTGTTATTTTGTTGTTGTTGTTGTTGTTACTAAGTTGTTTGATTTTCTTGTAGATTCTGGATATTAGTCCTTT chr4 - 94230402 35084317 35084316 35084410 59145993 59145992 59146086 94 ATCTTCCGTCACCTTCCTTTCAGC----TTTTCTGTTTGTTGTTGTTGTTGTTACTGATTTGTTTGTTTTGTTTTTTAATGTTGGGAATAATTCTTTT ....:.:x.::...x.:...:x::----..x.:.xx....................:.x.......x...x:..x.x:..x:...:x..x.x..:... 24M4D70M 64/94 68.1% 94/94230402 0.0% 4/94 4.3% 28755481 NA +3288 chr4 + 190214555 63848192 63848191 63848252 61 ATATATTACATATATTATATATAATACAAACATATTCATATATATTATATATTGTATATTA chr4 - 94230402 52829212 52829211 52829272 41401131 41401130 41401191 61 ACATATTATTTATATTATACATTATATAGTAACACACATATATATTATGTACTGTATACTA .:......:x.........:..x...:.:xx.:.:x............:..:......:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 11018980 NA +3277 chr4 + 190214555 63868876 63868875 63868921 46 TGTGTGTGTGTGTATTATATATATATATATATATATATGTTTGTGA chr4 - 94230402 46964825 46964824 46964870 47265533 47265532 47265578 46 TGTGTGTGTGTGTAGGACATATATATATATATATATGTGTGTGTAA ..............xx.:..................:...x...:. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 16904051 NA +3670 chr4 + 190214555 63877224 63877223 63877312 89 TTTACAAGGATTGGAAGGACTCACCAAGT-----GCTAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAA------AAGAGAGAGAGAGAAAGACACACA chr4 - 94230402 7711312 7711311 7711411 86518992 86518991 86519091 100 TTTTCAAGCTTGGAAAGCATTCAGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAACTACA ...x....xx.x.:...x.:...xx..:.-----..........:.....:...........:......x------.......:...:...::.xx:... 29M5I36M6I24M 68/89 76.4% 100/94230402 0.0% 11/89 12.4% 56165912 NA +3577 chr4 + 190214555 63885832 63885831 63885943 112 AGAAAAAGAAAGAAA-----GAAAAGGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAAGAGAGAGAG-------AGAAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 91538040 91538039 91538161 2692242 2692241 2692363 122 AGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAG--AGGAAGGAGGCACAGA ...:x.....:....-----..:..:....x.......:...x.x.xx.x...x.:....x.x.......:.x:.:.-------......x..xx..x.:......--........:.x.x:.. 15M5I57M7I22M2D16M 81/110 73.6% 122/94230402 0.0% 14/110 12.7% -27652208 -66578194 +3691 chr4 + 190214555 63885834 63885833 63885954 121 AAAAAGAAAGAAAGAAAAGGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAAGAGAGAGAGAGAAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 30533168 30533167 30533286 63697117 63697116 63697235 119 AAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAA--AAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ......:............::::..:.......xx:x...--....x...::xxx....x.:...xx..:.x.:.:...x..:.:..::...::.::.x:xx:.:.....::.:.:x..:. 40M2D79M 74/119 62.2% 119/94230402 0.0% 2/119 1.7% 33352666 NA +3054 chr4 + 190214555 63885858 63885857 63885926 69 AAAGAAAGAAAAGGAAAGAAAGAAAAAAAGAAAGAAAGAGAGAGAGAGAAAGGAAAGAAGGAAGGAAGG chr4 - 94230402 53862997 53862996 53863065 40367338 40367337 40367406 69 AAAGGGAGAAAGGGAAAGAAAGAAAAGAGAATAGGCAGAAACAGATGCTAAACAGAGAAAGCAGGCAGG ....::.....:..............:.::.x..:x...:.x...x:xx..:x.:....:.x...x... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 10022861 NA +3271 chr4 + 190214555 63926358 63926357 63926458 101 GAAAAACAGTCCATGTCAAGTATGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTTCTGGGGGGAGCCAGAGAGGAG-GTACA chr4 - 94230402 34493701 34493700 34493802 59736601 59736600 59736702 102 GAAAAACAGATCACATTTTGAGTGTTGTTTCCTTATGTATGTTTCTGAGTGTGTGTGTGTGTGTATTTGCCCCCTGTAGGTGGGGTCTGGTAGGTGTGTACA .........x:..::.:xx.x:..x...x.x:x.:...:...x.x..x................:....:x:x:.x.:..x..:.:.x.:x...x.-..... 96M1I5M 67/101 66.3% 102/94230402 0.0% 1/101 1.0% 29432657 NA +3101 chr4 + 190214555 63930795 63930794 63930835 41 CAAAGTGCTGATGGAAAACAAACAAACAAACAAAAAAAACA chr4 - 94230402 68812213 68812212 68812253 25418150 25418149 25418190 41 CAAAATGCTAAAAAAAAACAAACAAACAAACAAAAAAAACA ....:....:.x::........................... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -4881418 -89348984 +4511 chr4 + 190214555 63930938 63930937 63931039 102 CATCATCACCAGACAAACTCTAAGAAGTACTCAAGGAATTTGAAAACTGAAAG-TGAAAAAAAAAAAAAAAAAAAAAAAAAAAATGATATC----------TGCCATCATGAA chr4 - 94230402 75156676 75156675 75156788 19073615 19073614 19073727 113 CATCACTGCAAAGTAAACTCTAAGAAATATGCATTGAATTTGAAAGCAGTGAGATTAAGAAAAAGAAAAAAAAGAAAAAAAACATGATAACATATGTCATGTGCCATTAAGAA .....:::.x.:::............:..:x..xx..........:.x.x:..-.x..:.....:........:........x......x.----------......:.x... 53M1I37M10I12M 78/102 76.5% 113/94230402 0.0% 11/102 10.8% -11225738 -83004664 +3179 chr4 + 190214555 63957607 63957606 63957675 69 AGATAAACAATATTATACATGTGTGTGTGTATATATATATATATATATATATATATATATGTATCTAAA chr4 - 94230402 52579760 52579759 52579828 41650575 41650574 41650643 69 AAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAA .:....x:x...xx....:...........................:.x..xxx.x..:.:x:x..... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 11377847 NA +3819 chr4 + 190214555 63996879 63996878 63997018 140 TTTGTCCATTCCACCAACCCAGAGGATTGGGGATGGTAGGCACAATGGAAATGTTCTGTTATGGGCCAGATTTTGCAAATGGATTGAACAGCTTGTCCAGTAAAATGAGTCCCACAATCACTGTGCAGCTCAGAAGGAGT chr4 - 94230402 45748699 45748698 45748838 48481565 48481564 48481704 140 TTTATTCTTTCTACTACACAGCTGGATTGAAGATGGTAGGCACAATGCAGGTGCTGCTTAACATTTAATGCTTTGCAAATATCTTTAATCACTTGTCTTGTTAAATGAATGCCTCATGCACTACCTATTGTAAGAGGAAT ...:.:.x...:..:.xx.x:xx......::................x.::..:.x:x.x.::xx:x.x::.........:xx..x..:x:......:x..x......:.x..x..xx....::x:.x:x:.::....:. 140M 84/140 60.0% 140/94230402 0.0% 0/140 0.0% 18248180 NA +3099 chr4 + 190214555 64005605 64005604 64005657 53 AACTCCTAGAAAGTCTTATTCTACATTGATTTTTTTTCTTTGCCTAACTTCCA chr4 - 94230402 57115015 57115014 57115067 37115336 37115335 37115388 53 AACTCTTAAATTGTCTTATTTTTCTTCAACTTTTCTTCTTTGCCTGACTTCCA .....:..:.xx........:.x.x.::.:....:..........:....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 6890590 NA +3096 chr4 + 190214555 64048507 64048506 64048549 43 CCATATACATATATACACACACATATATATATACACACACGCA chr4 - 94230402 45271686 45271685 45271728 48958675 48958674 48958717 43 CCATATCTATATATACACACATATATATGTATACAAACACACA ......x:.............:......:......x....:.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 18776821 NA +4047 chr4 + 190214555 64053016 64053015 64053131 116 TATACATACATATACATATACATATACATATA--CATATACATATACATATACATATAC----ATATACATATACATATACATA----TACATATACATATATATATATACACATTTTTTTTTTTT chr4 - 94230402 73121102 73121101 73121227 21109176 21109175 21109301 126 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTT .:.:...:.....x....:.........:.x.--...:x::.:....:....x:..:..----....:::x:........x...----:...x.x...:.:..:....x:..x....::..x.... 32M2I25M4I21M4I38M 82/116 70.7% 126/94230402 0.0% 10/116 8.6% -9068086 -85162316 +3140 chr4 + 190214555 64053020 64053019 64053131 112 CATACATATACATATACATATACATATACATATA--CATATACATATACATATACATATAC----ATATACATATACATATACATATAC--------ATATATATATATACACATTTTTTTTTTTT chr4 - 94230402 73121100 73121099 73121225 21109178 21109177 21109303 126 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATT .:.::::..:.....x....:.........:.x.--...:x::.:....:....x:..:..----....:::x:........x...::.--------.:.:.:..:....x:..xx...::..x.. 34M2I25M4I24M8I29M 74/112 66.1% 126/94230402 0.0% 14/112 12.5% -9068080 -85162322 +3180 chr4 + 190214555 64053033 64053032 64053119 87 ATACATATACATATACATATACATATACATATACATATACATATACATATACATATACATATACATATACATATATATATATACACA chr4 - 94230402 73121107 73121106 73121193 21109210 21109209 21109296 87 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACA ..:.....x....:.........:.x.x::..:x:..:.:.::..:.x:....::x::....:::x:........x...:::x.... 87M 54/87 62.1% 87/94230402 0.0% 0/87 0.0% -9068074 -85162328 +3083 chr4 + 190214555 64074926 64074925 64074973 48 AAAAAAAAAAAAAAAAAAGAAATAAAAGAGGACACAATCAAATGGAAG chr4 - 94230402 29269118 29269117 29269165 64961238 64961237 64961285 48 AAAAAAAAAAAAAAAAAAGCAACAAAAAACAACACATTGAAATGGGAG ...................x..:....:.x:.....x.x......:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 34805808 NA +3175 chr4 + 190214555 64099270 64099269 64099321 52 AAAAAAGAAAAGAAAAAGAAAAAGTGGCTAAGGGAGGGAGATGGAGAGGACA chr4 - 94230402 6438511 6438510 6438562 87791841 87791840 87791892 52 AAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATGACA .....::.....:....:.....:x..xx:.:...............x.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 57660759 NA +3108 chr4 + 190214555 64155273 64155272 64155336 64 TATACATACACATATACATATGTGTGTACACATATACATATGTGTGTATATATATACACACATA chr4 - 94230402 53842123 53842122 53842186 40388217 40388216 40388280 64 TATAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACA ....xx......xx....:..x...:.:.......:....::...:x...x.:.:.:.....:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 10313150 NA +3081 chr4 + 190214555 64155552 64155551 64155606 55 ATACACATACACGTATGTGTGTATACACATATACGTATGTGTATATATATACATA chr4 - 94230402 38535895 38535894 38535949 55694454 55694453 55694508 55 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ...:.:.:.......::..x.x.........:..::........:...::.:.:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 25619657 NA +3036 chr4 + 190214555 64167883 64167882 64167926 44 AACACAGTGAGACTGTCAAAAAAAAGAAAAAAAAAAAGCAATCT chr4 - 94230402 90015666 90015665 90015709 4214694 4214693 4214737 44 AACACAGTAAAACTTTCAAAAAAAAAAAAAAAAGAAGGGAATCT ........:.:...x..........:.......:..:.x..... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -25847783 -68382619 +3233 chr4 + 190214555 64178571 64178570 64178619 49 TGTAAATTATTCTTTTCGGTTTTTTTTTTTTTTTTTTTTTGAGATTGAG chr4 - 94230402 11962652 11962651 11962700 82267703 82267702 82267751 49 TGTAAATTATTTGTTTGGGGTTTTTTTTGTTTTTGTTTTTGAAATTGAG ...........:x...x..x........x.....x.......:...... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 52215919 NA +3053 chr4 + 190214555 64189274 64189273 64189326 53 GTTGTTCACTCTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTT chr4 - 94230402 50347413 50347412 50347465 43882938 43882937 43882990 53 GTTTTTCACTTTTTTTGTTGATGCTGATGTTTTTGTTGTTGCTATCATTCTTT ...x......:.........x..:..x....x.........:.:.:x..x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 13841861 NA +3239 chr4 + 190214555 64200656 64200655 64200786 131 GAACCCGGGCGGCGGAGGTTGTGGTG-----AGCTGAG--ATCATGCCATTGCACT-CCAGCCTGGGTGACAGAGCAAGACTCTGTCACACATACACACACACACACACACACACACACACAGAAAAAAAAAAAGAAAG chr4 - 94230402 76394326 76394325 76394442 17835961 17835960 17836077 117 GAATCATGGAGTGGGAGCTGGCAGTGGCATTAGCGGAGCCATTGAGCTTTTGCCCTTCCAGCCTGGGAGACA----------------------CTCACCAGCTTACACACACACACACACAAAAAAAAAAAAAAAAAG ...:.xx..x.xx....x.x.::...-----...x...--..::x..:x....x..-..........x....----------------------.x...xx:.x:.................:...........:.... 26M5I7M2I16M1I15M22D45M 83/109 76.1% 117/94230402 0.0% 30/109 27.5% -12193670 -82036732 +3036 chr4 + 190214555 64200745 64200744 64200793 49 ACACACACACACACACACACACACAGAAAAAAAAAAAGAAAGAAAGAAA chr4 - 94230402 51255353 51255352 51255401 42975002 42975001 42975050 49 ACAATCACACACACACACATCCACAAACCAAAAAAAAGAAAAAAAAAAA ...xx..............:x....:.xx............:...:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 12945392 NA +3145 chr4 + 190214555 64249604 64249603 64249691 88 TCATTTGTCATAATTGCTTCACTACCTCTCTCTAATTTCTTTTTTCTTCCTGACCACCTGCTTCCTGTTTAGCAATTTCTCTTTTTTA chr4 - 94230402 64117859 64117858 64117943 30112460 30112459 30112544 85 TTATTGGCAATTTTTGTTGCACT---TCTCTTTTATATTTTCTTTTCTCCTTAGAACCTTCTTTGTACTTAGCAGTTTTTCCTTTTTA .:...x.:x..xx...:.x....---.....:.x..x.:..:...::....x.xx....x...:x.::......:...:..:...... 23M3D62M 59/85 69.4% 85/94230402 0.0% 3/85 3.5% 131745 NA +3047 chr4 + 190214555 64448539 64448538 64448590 52 ACATTTTGGATTCCAACAGAAATTCATTTTATATTTCTTGTTACTGGGTAAA chr4 - 94230402 33629970 33629969 33630021 60600382 60600381 60600433 52 ACATTTTTGTTTCTAACAGAAATTCATCTTTTATCTTTCTTTGCTGGGGAAA .......x.x...:.............:..x...:.:.:x..:.....x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 30818569 NA +3240 chr4 + 190214555 64469894 64469893 64469948 55 ATAATTTCTGACAAAATGTATATATACATATTAGACTATTTTGATTTCTACAGAT chr4 - 94230402 71667119 71667118 71667173 22563230 22563229 22563284 55 ATTAATTCTGACAGAATATATATATACATATAGGCCTATTTATATTTCTACATAT ..x.x........:...:.............x:.x......xx.........x.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% -7197225 -87033177 +3378 chr4 + 190214555 64488213 64488212 64488303 91 AATGTGTGTATTTATTTGTATGTGTGTATATACATATATGTATATATTCTTTATGTGTGTGTATATGTGTGTACGTGTGTAAAATCCTATT chr4 - 94230402 12785630 12785629 12785720 81444683 81444682 81444773 91 AGTGTATAGATTTGGTTATATATACTTACACACATACATGCTTATATTCTTTATATATGAATACATTTAATCACATTTGTAGGGTAATATT .:...:.:x....:x..:...:.::x..:.:.....:...:x............:.:..x:..:..x.:xx:..:.x....:::.xx.... 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 51702583 NA +3054 chr4 + 190214555 64495725 64495724 64495762 38 TGTATGTGTGTGTGTATATATATATATATTATATATAT chr4 - 94230402 63396167 63396166 63396204 30834199 30834198 30834236 38 TGTGTGTGTGTGTGTATATATATATATATAATACATAT ...:.........................x...:.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 1099558 NA +3107 chr4 + 190214555 64523126 64523125 64523176 51 AAAAAAAAAAAAAAAAAAAAGATAAAAGAAAAAAAATTATACATACTAACC chr4 - 94230402 37758204 37758203 37758254 56472149 56472148 56472199 51 AGAAAAAAAGAAAAAAAAAAGATAAAATAAAAAGTGTTACTCATCTTAACC .:.......:.................x.....:x:...:x...x:..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 26764922 NA +3561 chr4 + 190214555 64553630 64553629 64553703 74 CTGCAACCTTCCCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAAACTACAGGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xxxx..:.::........:.x...x.xx.x........::..........:.......x....:. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 46356504 NA +3054 chr4 + 190214555 64742459 64742458 64742517 59 CGACACAGCAAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCCTTCA chr4 - 94230402 91230452 91230451 91230510 2999893 2999892 2999951 59 CAAGACAACCAAAAGAAAAAAAAAAAAAAAGAGCAAGCAAGCAAAAGGAAATCCACTTA .:.x...:.x....:...............:.:...:...:....x::...x..x:.:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% -26487993 -67742409 +3029 chr4 + 190214555 64742468 64742467 64742511 44 AAAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAAC chr4 - 94230402 11261225 11261224 11261268 82969135 82969134 82969178 44 AAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAGGC ......::...x.:....x......................::. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 53481243 NA +3136 chr4 + 190214555 64742469 64742468 64742515 47 AAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCCTT chr4 - 94230402 59297020 59297019 59297066 34933337 34933336 34933383 47 AAAAAAAAGAAGAAAAAAAGCAACAAACAAACAAAAATCAAACCCTT ........:..:.......:x..............x.xx........ 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 5445449 NA +3032 chr4 + 190214555 64742476 64742475 64742533 58 AAAAAAAAAAAAAAAACAAACAAACAAACAAAAAACCCTTCACTGGTGATATCAAAAT chr4 - 94230402 66233659 66233658 66233716 27996687 27996686 27996744 58 AGAAGAAAGAAAAAAACAAACAAACAAACAAAAACCTCACCTCAGTTCAAGTCAAAGT .:..:...:.........................x.:.x:.x.x.x.x.x:.....:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% -1491183 -92739219 +3116 chr4 + 190214555 64742476 64742475 64742511 36 AAAAAAAAAAAAAAAACAAACAAACAAACAAAAAAC chr4 - 94230402 40371512 40371511 40371547 53858856 53858855 53858891 36 AAAAAAAAAAAAACAACAAACAAACAAACAAAAAAC .............x...................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 24370964 NA +3183 chr4 + 190214555 64806365 64806364 64806501 137 TTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCTTCTCTCTTCTCTTTTTCTCTCTT--CTCTCTTCTTCTTTCTTTT chr4 - 94230402 28459137 28459136 28459275 65771128 65771127 65771266 139 TTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTT .....x:.::xx.....:.:.::...xx...:.x.x.....:...:..:.x.......:.:...:::xx......xxxx.x:.::.:x..xx:.:.x:..xx.x.:.:.x...:.x..--.:..x...:...x:..... 118M2I19M 82/137 59.9% 139/94230402 0.0% 2/137 1.5% 36347228 NA +3221 chr4 + 190214555 64806366 64806365 64806455 90 TTTCTTTTCTTTTCTTT---TCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTC chr4 - 94230402 35294589 35294588 35294681 58935722 58935721 58935814 93 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC ....:.:.:...:.:..---.:x......:..:....x....:..x.....::.:......x:..:..:.:xx.:x::x......::..x:.. 17M3I73M 59/90 65.6% 93/94230402 0.0% 3/90 3.3% 29511777 NA +3275 chr4 + 190214555 64806378 64806377 64806502 125 TCTTTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCT-----------TCTCTCTTCTCTTTTTCTCTCTTCTC-TCTTCTTCTTTCTTTTC chr4 - 94230402 24861592 24861591 24861728 69368675 69368674 69368811 137 TTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTTACAAGCCTTTAATCTATAACCCTGCCGTGTCACCTTTCCCTTTCTTTTC .:..:.:.x.:.:.x.x..x.......:...::.:.x.:x:...:.:.:.:..:......:..::...:.....x:..x..:-----------:..:.xx...x.xx::..x:.x.x..-:...:::.......... 82M11I26M1I17M 78/125 62.4% 137/94230402 0.0% 12/125 9.6% 39944786 NA +3261 chr4 + 190214555 64806380 64806379 64806462 83 TTTTCTTTTCTTTTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCTTCT chr4 - 94230402 7586132 7586131 7586214 86644189 86644188 86644271 83 TTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTTTCAGCTCATTACTCCCAACTCCTTCTGCT .......xx...............::.........xx.:x....x:..:.:..:..xx...x..x:::.:xx:::.....x.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 57220248 NA +4037 chr4 + 190214555 64806383 64806382 64806526 144 TCTTTTCTTTTTTCTTTTCTTTTTTCTT---TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTTTTCTCTTCTCTCTTCTTCTCTCTTCTCTTTTTCTCTCTTCTCTCTTCTTCTTTCTTTTCTTTTCTTTTCTTCTCTTT--TCTTCT chr4 - 94230402 28459063 28459062 28459211 65771192 65771191 65771340 149 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCT ..x...:......x:.xx....x..x..---....x.x...:.:x...x.::....:::....::.xx.x...x.:...x::::xx....::...:....xx.:.:.x.x...:.:...:..:.x....:..:..:..:.:--...... 28M3I110M2I6M 92/144 63.9% 149/94230402 0.0% 5/144 3.5% 36347320 NA +3237 chr4 + 190214555 64806432 64806431 64806493 62 TCTCTTCTCCTTTTCTCTTCTCTCTTCTTCTCTCTTCTCTTTTTCTCTCTTCTCTCTTCTTC chr4 - 94230402 70202201 70202200 70202262 24028141 24028140 24028202 62 TCTCTGCTTCTTCTCTCTTCTCTCTTCTCCCCCCTCCCCCCCTTCCCAATTTTCCTTTTCTC .....x..:...:...............:.:.:..:.:.:::...:.xx..:..::..::.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% -5395769 -88834633 +3184 chr4 + 190214555 64806463 64806462 64806513 51 CTCTTCTCTTTTTCTCTCTTCTCTCTTCTTCTTTCTTTTCTTTTCTTTTCT chr4 - 94230402 36600614 36600613 36600664 57629739 57629738 57629789 51 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTT ...:.:.:..::........::.::........:......x........:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 28205849 NA +3211 chr4 + 190214555 64823599 64823598 64823692 94 TAAAAAATATTTTTATGTTTTATGTTTTTTTCTTTTGAAATTAGCCGAAAAAAAAAGTACTTAA-TGGCAATTGTTTATTTCATATAAAAATTAA chr4 - 94230402 24355384 24355383 24355478 69874925 69874924 69875019 95 TAAATCATAGCTTCCTGTTCTATTTTTTTTTCTTTTGACATGAGCAGAAAAAAAGGGAAATGAAGTGGAAATAACACACCACACAGAATAATCAA ....xx...x:..:x....:...x..............x..x...x........::.x.x.x..-...x...x::x:.::x..:.x..x...:.. 64M1I30M 65/94 69.1% 95/94230402 0.0% 1/94 1.1% 40468215 NA +3600 chr4 + 190214555 64832304 64832303 64832419 116 TTGACTTCCTCTTTACCGATTTTCTTTTTCTTTCTTTTCTTTCTTTCCTTCTTTCCTTCCTTCCTTTCTCCTCTTTCT-TTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCT chr4 - 94230402 4731685 4731684 4731796 89498607 89498606 89498718 112 TTAATCTTTCCTCTACCTATCTTCTTTTTCTTTCATTCATCTGCTCCC-----TCCCTATTTGCTTTTTGCTCTTCTTAATCCTCCTGCATTTTTATTCCCTTCCATTTCTTTTCCT ..:.::.:::..:....x..:.............x..:x.:.x:.:..-----...:.x:..x....:.x.....::.-x..:.:..x:x.:...x..:.:...:x.:......:.. 48M5D25M1I38M 73/111 65.8% 112/94230402 0.0% 6/111 5.4% 60100619 NA +3442 chr4 + 190214555 64832313 64832312 64832517 205 TCTTTACCGATTTTCTTTTTCTTTCTTTTCTTTCTTTCCTTCTTTCC--------TTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCT---------CTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 52305119 52305118 52305340 41925063 41925062 41925284 222 TCCTCACAAAGTATCTTGGGCTCCCTTTAATCCTTTCTCAGTTTTCTGAACTCTATTTTGATCTTCCACCAGCTCCCTTGTGCCATTCCCATTCTGTCATCTCCCCTAGAGAACATTTCTCTCTTGCTCTCATGCTTTCCCTCCGCCTTACTCTGTTATTCCTTCACTTTCACGTGATGTACCTGATTGTCTCCCTGTGTTTTTTTTTGTTTTTTTTTTCCT ..:.:..x:.x.x....xxx..::....xx.:::..::.xx:....:--------..::xx:...:.x..xx:.:.:..x.x:.x...:.x....x..x.:::::..---------:.:.:....x..:..x.x.....::..:x:...x....x.:x...:...x.....x.x.xx.x.x::.xx:.x....::.x.x.:...:...x...:...:..:.. 47M8I52M9I106M 118/205 57.6% 222/94230402 0.0% 17/205 8.3% 12527194 NA +3595 chr4 + 190214555 64832325 64832324 64832436 112 TTCTTTTTCTTTCTTTTCTTTCTTTCCTTC----------------------------------TTTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 4165275 4165274 4165420 90064983 90064982 90065128 146 TTCATTTTCCTTCTTTTCTTCCACTTCTTCACTTATTAAATATTTTTTATCTCAACCCACATGTTTTCTTTACTGCCTTTTTAAACTTTATTTGTTTCCTTAACTTTTTTGCTCTCTTCTTCCCCTTTTTCCTTGTCTCCTGTCCT ...x.....:..........:.x:.:....----------------------------------....:..x..x.....:.xxx....x...x....:..xx....:..x..:....::..:::..:..:...x::.:..x..:. 30M34I82M 78/112 69.6% 146/94230402 0.0% 34/112 30.4% 60667050 NA +3224 chr4 + 190214555 64832326 64832325 64832403 78 TCTTTTTCTTTCTTTTCTTTCTTTCCTTCTTTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTC--CCTTTTTCTTACT .:.....:....:x..:.:...x.xx:xx..:....x.x.:.....:...:............--:..:......x.. 63M2D13M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 8680776 NA +3401 chr4 + 190214555 64832331 64832330 64832423 93 TTCTTTCTTTTCTTTCTTTCCTTCTTTCCTTCC----TTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:.:......:..:...:::...:x..:...----.:.x....xx:...xxx:....x.:.:.:...:...:...:...x.xx...:........ 33M4I60M 62/93 66.7% 97/94230402 0.0% 4/93 4.3% 21750403 NA +3646 chr4 + 190214555 64832333 64832332 64832501 169 CTTTCTTTTCTTTCTTTCCTTCTTT----------CCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTT----CTT--------TCTCTTTCTCTTTCTTTCTTTCT chr4 - 94230402 61332288 61332287 61332477 32897926 32897925 32898115 190 CTGTCTTTTCTCTGTCCCCTTTTTTATCATCCAATCTTTATTTTCCTTCTTCACTTTTTGTCTTTCTTAATTTCCCTTTAATTGTTCCTAGCGTTGATTTTGTC-TTCTTTCTCTGAAGTTGTTCTGTTCCATTTCCCCTTTTCTGATTCATTGAAGCCTGAAAAAGATTTGTTTCTCTTTTTTTCTTCTT ..x........:.x.::....:...----------.:..x:..:.:....:.x....:.x........xx.:.::....xx..x..:..xx:x..xx..:.x..-........:.xxxx:.x.:::x...:x.:.::.::.....xx...x..----.:.--------.:.x.........:......::. 25M10I69M1D48M4I3M8I23M 109/168 64.9% 190/94230402 0.0% 23/168 13.7% 3500045 NA +3318 chr4 + 190214555 64832340 64832339 64832457 118 TTCTTTCTTTCCTTCTTT------CCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------.:x...:......::.:.:...:.:...:x.::..:x.x.:::x:..:xx....xxx:....x.:.:.:.:...:...:.....x.xx..::........ 18M6I100M 72/118 61.0% 124/94230402 0.0% 6/118 5.1% 21750439 NA +3132 chr4 + 190214555 64832343 64832342 64832440 98 TTTCTTTCCTTCTTTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTC----------TTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTC chr4 - 94230402 52305234 52305233 52305341 41925062 41925061 41925169 108 TTTCTCTCTTGCTCTCATGCTTTCCCTCCGCCTTACTCTGTTATTCCTTCACTTTCACGTGATGTACCTGATTGTCTCCCTGTGTTTTTTTTTGTTTTTTTTTTCCTC .....:..:.x..:..x.x.:....:.:.x...:x:...x.:x...:...x.....----------::.xx..x.:..:..x.x.:...:...x...:...:..:... 56M10I42M 65/98 66.3% 108/94230402 0.0% 10/98 10.2% 12527109 NA +3202 chr4 + 190214555 64832348 64832347 64832423 76 TTCCTTCTTTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCT----TTCTCTTTTTCTTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .:....x.x.::.x.:...::.xx....x...:..........:..:.........x...----...::x...:..x... 60M4I16M 55/76 72.4% 80/94230402 0.0% 4/76 5.3% 45843531 NA +3679 chr4 + 190214555 64832355 64832354 64832489 135 TTTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTT-----CTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTT-TCTCTTTCTCT chr4 - 94230402 4165280 4165279 4165420 90064983 90064982 90065123 141 TTTCCTTCTTTTCTTCCACTTCTTCACTTATTAAATATTTTTTATCTCAACCCACATGTTTTCTTTACTGCCTTTTTAAACTTTATTTGTTTCCTTAACTTTTTTGCTCTCTTCTTCCCCTTTTTCCTTGTCTCCTGTCCT ........:..:...:.x.:....:x:..x..xxx.x:.:...x.:..xx:.:x:x.x....::..x..x:....-----....x...x.:..:..xx....:..x..:...::...:.:..:..:...-....:.x::.. 75M5I49M1I11M 86/135 63.7% 141/94230402 0.0% 6/135 4.4% 60667075 NA +3573 chr4 + 190214555 64832356 64832355 64832477 122 TTCCTTCCTTCCTTTCTCCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCT--TTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.........x.x::..xxxx.x..x..::..:..:..:..:...:.:...:x.:..::x.x..:.x..::--....xxx:....x.:.:.:...:...:...:...x.xx..::........ 72M2I50M 76/122 62.3% 124/94230402 0.0% 2/122 1.6% 21750455 NA +3215 chr4 + 190214555 64832373 64832372 64832497 125 CCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTT--CTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCT--CTGTAGCTTCTTCTTTCT .::.:...:...x.x...:xxxx.x..x..::..:..:..:....:.....:..x::..::x.x.::.x:..:--:...xxx:....x.:.........:...:...--..x.xx..::........ 73M2I32M2D18M 77/123 62.6% 125/94230402 0.0% 4/123 3.3% 21750473 NA +3184 chr4 + 190214555 64832375 64832374 64832444 70 TCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT ...:.:....x.....:.x...:...:.x...::...:..::::.x......:..::.x......x.x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 19234662 NA +3529 chr4 + 190214555 64832407 64832406 64832549 143 TTTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTC chr4 - 94230402 79422434 79422433 79422576 14807827 14807826 14807969 143 TTTATCTTGGTCTGTCGTCTTCTAATTTTTTCCCTCCTTTCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTTTCTCCTTTGCCATTGTTATTTGAGGCTTTCACTCTCTCTTTTCTCTC ...x....xx...x..x.::.:.xx..:....:...:..::.x..:..:...:.:xx:x:....x::...:xx..:....:x::.::x.::.xx.....:::..x.:x.:x..x...xxxx.....x:...:........:.. 143M 83/143 58.0% 143/94230402 0.0% 0/143 0.0% -14590027 -79640375 +3134 chr4 + 190214555 64832431 64832430 64832491 61 TTTCTTTCTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTT----CTCTTTCTCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ..:.x..:.:...........:...:......:.:::.::....:....----...:...x.... 49M4I12M 46/61 75.4% 65/94230402 0.0% 4/61 6.6% -383235 -93847167 +3601 chr4 + 190214555 64832433 64832432 64832568 136 TCTTTCTCTCTTTCTCTTTCTTTCTTTC--TCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCT chr4 - 94230402 63216368 63216367 63216507 31013896 31013895 31014035 140 TCTTTCTCACTTGCCTTATTTTTCCTTCAGTCCTCTTCATTTTTTGCTTTGTTTTTGTATGATTTCTTTAACTTCCTCAGTTCCAACAAATCTTTCCTTTTGTCTACTCAATTATTTTTTCTATCTTTCTTTTTCTTCTT ........x...x.::.x.:....:...--..:.::..x..:...x:..:x:...:x:x.xx.......--...:..:xx..:.xx:xxx......:..:.x...x:::xx:.x..:.....x..............::. 28M2I39M2I69M 87/136 64.0% 140/94230402 0.0% 4/136 2.9% 1616065 NA +3200 chr4 + 190214555 64832443 64832442 64832525 83 TTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 53118144 53118143 53118225 41112178 41112177 41112259 82 TTTATCCTCCTTTATT-CTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT ...x..:.:....x..-....x.x.::..........x...x.xx..:..:.x....x...x...x..x......:::..:.. 16M1D66M 59/82 72.0% 82/94230402 0.0% 1/82 1.2% 11714299 NA +3230 chr4 + 190214555 64832451 64832450 64832573 123 TCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTC chr4 - 94230402 23468147 23468146 23468269 70762134 70762133 70762256 123 TTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTC .:...xx.x.::...:.:...:....:..:....:xx.x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx.:::.x.:x.....:x:......x...::....x..x:..:... 123M 74/123 60.2% 123/94230402 0.0% 0/123 0.0% 41364304 NA +3895 chr4 + 190214555 64832454 64832453 64832578 125 TTCTTTCTCTTTCTCTTTCTTTCT-TTCTC---TTTCTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCT--TTCTCTTTCT chr4 - 94230402 45185583 45185582 45185711 49044692 49044691 49044820 129 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT---TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x..x...x..:..::....:..-x....---.....x:...x........---........-...:.:x.:..::..........xx:....::......:x...xx.x:....:x..--..x....... 24M1I5M3I19M3D8M1I56M2I10M 91/122 74.6% 129/94230402 0.0% 10/122 8.2% 19646871 NA +3686 chr4 + 190214555 64832483 64832482 64832596 114 TTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTCTTGTCTAACTGACCTAG chr4 - 94230402 45185576 45185575 45185688 49044715 49044714 49044827 113 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAG ...x.x:..x..x..:x:....::....:..xx::.:xx..:.:.x:...x................x..:..:x::....-........:.xx.....x:..xx..x..:... 81M1D32M 75/113 66.4% 113/94230402 0.0% 1/113 0.9% 19646907 NA +3058 chr4 + 190214555 64834381 64834380 64834454 74 ATATGTAGAGAGATATGTGTGTGTGTGTATATATATATACACACATATATATCTACATATGTATACATATATAC chr4 - 94230402 56650832 56650831 56650905 37579498 37579497 37579571 74 ATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATGGCCCAAGGTAAAGCCATATAC ..x..:.x..xx.....:.....::.x......:...:..............xxx.xx.x...x.xx:...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 8183549 NA +3594 chr4 + 190214555 64834434 64834433 64834550 117 TACATATGTATACATATATACATATATACATATATGTATACATATATACATATATACATATATGTATACATATATACATATATACATATATGTATACATATATACATATATACATAT chr4 - 94230402 73121108 73121107 73121224 21109179 21109178 21109295 117 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .:.....x:.....:.......:.x.x:...:x:.::....:....x::.:.::x::....:..x:........x.:.:::x:...x.x.:::.:.::....x:..x..x.x.x... 117M 70/117 59.8% 117/94230402 0.0% 0/117 0.0% -8286674 -85943728 +3406 chr4 + 190214555 64834562 64834561 64834629 68 TATACATATATACATATATGTATACATATATACATACATATATACATATATACATATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:..:....xxx............:.x.:......:x.:..:.:.x:...:....:..:....:.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 16667524 NA +3142 chr4 + 190214555 64834588 64834587 64834655 68 TATATACATACATATATACATATATACATATATACATATATGTATACATACACATATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:....:..xxx:.....::......x.:...:.::x.:....::x.........:..:....:.... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 16667550 NA +3708 chr4 + 190214555 64834599 64834598 64834752 154 ATATATACATATATACATATATACATATATGTATACATACACATATATACATATATGTATATACATATAAGTATACATATATGTATATATATACACATATACACATATATCTACATATATAT---------CTACATATGTGTATATATACACATATATATCT chr4 - 94230402 4417343 4417342 4417497 89812906 89812905 89813060 155 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-------CACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACA-ACACACAGAAATCT ..x..x...........:.:.:...:.x:x::....::.::x:x:.x.:..:..:.:.xx.x:...x..::......:....x...x.....:.-------....x.:.::x.......x.:---------..x...::x...:..:.-.....:.x.x.... 94M7D21M9I17M1D14M 95/146 65.1% 155/94230402 0.0% 17/146 11.6% 60417256 NA +3000 chr4 + 190214555 64834625 64834624 64834711 87 ATATGTATACATACACATATATACATATATGTATATACATATAAGTATACATATATGTATATATATACACATATACACATATATCTA chr4 - 94230402 64944124 64944123 64944210 29286193 29286192 29286279 87 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATA .:..:x....:..:.x...x.....x...........:x.:.:..xx.::..x.x.x...x.:....::.x.x.:.:::...:.x.. 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% -109499 -94120903 +3541 chr4 + 190214555 64834656 64834655 64834727 72 TATATACATATAAGTATACATATATGTATATATATACACATATACACATATATCTACATATATATCTACATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x.......::.....:........:...::......:xx.:...x.::..:..:.:.:.:..:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 12353420 NA +3033 chr4 + 190214555 64834738 64834737 64834803 66 TACACATATATATCTACATATAAGTATACATATATGTATATATATACACATATACACATATATCTA chr4 - 94230402 32959562 32959561 32959627 61270776 61270775 61270841 66 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCA .:..xx.:.:..:...:.:..:...:.x::.:..:..:::........:.......x......::. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 31875176 NA +3928 chr4 + 190214555 64834744 64834743 64834876 133 TATATATCTACA-----TATAAGTATACATATATGTATATATATACACATATACACA----TATATCTACATATATATCTACATATGTGTATATATACACATATATATCTACATATACATATACACACATATATACACATAT chr4 - 94230402 73121075 73121074 73121216 21109187 21109186 21109328 142 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:..:.:.:...-----.:...x:x::::.::...:....x:...............----:..:xx......::...xx::.:.:.x......:.:x::.:.....xx...::x:...x.x........:....x:..x.. 12M5I40M4I81M 85/133 63.9% 142/94230402 0.0% 9/133 6.8% -8286331 -85944071 +3364 chr4 + 190214555 64834755 64834754 64834819 65 ATATAAGTATACATATATGTATATATATACACATATACACATATATCTACATATATATCTACATA chr4 - 94230402 52481243 52481242 52481307 41749096 41749095 41749160 65 ATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA .......::.....:........:...::......:xx.:...x.::..:..:.:.:.:..:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 12353512 NA +3071 chr4 + 190214555 64834802 64834801 64834868 67 TACATATATATCTACATATGTGTATATATACACATATATATCTACATATACATATACACACATATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .::......xx.:.:......:....x.:.:....:x.:..x.:.x:.....:..::......:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 16667764 NA +3051 chr4 + 190214555 64834822 64834821 64834906 85 TGTATATATACACATATATATCTACATATACATATACACACATATATACACATATACATATATACACATATATACACATATCTAT chr4 - 94230402 29942997 29942996 29943081 64287322 64287321 64287406 85 TGTATATAGGAAAGAAAATGTCCAAACAGAAAGACAGATACATGTTTTCACATATGAATATATGCATCTGTATACATGTATTTAT ........x:x.x:x.x..:..:.x.:.x.x.x.:.x.:....:.x.x.......:x......:..:x.:......::...:... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 34891825 NA +3143 chr4 + 190214555 64834826 64834825 64834940 115 TATATACACATATATATCTACATATACATATACACACATATATACACATATACATATATACACATATATACACATATCTATACATATATACACATATATACATATATACACACAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.::.::.....x:..x:.........:.x.x:..::x:..:.:..:....x:..:.::x::....:.:x::.:..x..x.:.:::x:...x.x.:.:....:....x:..x.. 115M 65/115 56.5% 115/94230402 0.0% 0/115 0.0% -8286276 -85944126 +3791 chr4 + 190214555 64834849 64834848 64834984 136 ATACATATACACACATATATACACATATACA----TATATACACATATATACACATATCTATACATATATACACATATATACATATATACACACATATATATATACACATATATATA-----CACACACACACA-CACATACACCG chr4 - 94230402 73121107 73121106 73121252 21109151 21109150 21109296 146 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACACCG ..:.....x..:...:.........x.x:..----..:....::...x:.....:x:.x...:::x:..:.:.:.x...::.x:.:.x.x.....:..:....x:..x..x.x:x..-----..x.:..:.x..-.x......... 31M4I82M5I12M1I11M 90/136 66.2% 146/94230402 0.0% 10/136 7.4% -8286258 -85944144 +3136 chr4 + 190214555 64834902 64834901 64834973 72 TCTATACATATATACACATATATACATATATACACACATATATATATACACATATATATACACACACACACA chr4 - 94230402 7596410 7596409 7596479 86633924 86633923 86633993 70 TCCATACAGATGCATACAAATGTA--TATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:.....x..::.:...x..:..--....:....:...:....:.x...:...:x..::...:...:.x.. 24M2D46M 50/70 71.4% 70/94230402 0.0% 2/70 2.9% 57238492 NA +3267 chr4 + 190214555 64834903 64834902 64834979 77 CTATACATATATACACATATATACATATATACACACATATATATATACACATATATATACACACACACACACACATA chr4 - 94230402 8395786 8395785 8395862 85834541 85834540 85834617 77 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:::.:...::::::...x....:...x:...:..:...::x....:xx...:.:.............x...:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 56439117 NA +3207 chr4 + 190214555 64834907 64834906 64834981 75 ACATATATACACATATATACATATATACACACATATATATATACACATATATATACACACACACACACACATACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::.:.:..::::.::...x.:..:..:x:......:...::x:....xx...:...............x.:... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 56439119 NA +3326 chr4 + 190214555 64834918 64834917 64834991 74 CATATATACATATATACACACATATATATATACACATATAT----------ATACACACACACACACACATACACCGTGGAATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.::..:.:.:..:.x.:..:...x....:..:...----------...................x....x:xx..... 41M10I33M 55/74 74.3% 84/94230402 0.0% 10/74 13.5% 56439131 NA +4042 chr4 + 190214555 64868350 64868349 64868481 132 TATACATCTATACATACATGTATACACATGTGTATGTATACACATATACATACATGTATACACATGTGTATGTA--------TACACACATACATACATGTATACACATGTGCGTACACACATACATACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:....:.:.:.x.x..-....xx.x.:....:...:...:x....:.....:.:::.x.x:....x...::..--------.....:x:..:..:::x...:.:.:.x:.:..:x....x.x...:.........x:.. 17M1D56M8I58M 85/131 64.9% 139/94230402 0.0% 9/131 6.9% -8252725 -85977677 +3704 chr4 + 190214555 64868386 64868385 64868515 130 TATACACATATACATACATGTATACACATGTGTATGTATACACACATACATACATGTATACACATGTGCGTACACACATACATACATGTATAC----ACATGTGCGTACA------------CACACATACATACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAAC-TGTAATCTCGTGTGCATG------CATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.....x:.:.x.x..-....xx.x.:....:...------..:..x......::........x:x..:.:x::......:..:.x...:..----.:.....x.....------------....x.x...:.........x:.. 17M1D18M6D51M4I13M12I24M 89/123 72.4% 139/94230402 0.0% 23/123 18.7% -8252689 -85977713 +3875 chr4 + 190214555 64868403 64868402 64868534 132 ATGTATACACATGTGTATGTATACACACATACATACATGTATACACATGTGCGTACACACATACATACATGTATACACATGTGCGTACACACACATACATACATGTATACACATG---------TGTGTACACACACATAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ....::......x..:...:.:......:.x::::..:::.:.::..x:...:.....::.x.::.:::..:.x....x..:..::....:x.:::::::x....x::....x..---------....:x..:.:x..:.. 115M9I17M 77/132 58.3% 141/94230402 0.0% 9/132 6.8% -24147679 -70082723 +4417 chr4 + 190214555 64868439 64868438 64868568 130 ATGTATACACATGTGCGTACACACATACATACATGTATACACATGTGCGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATA--CATGCATACACATG---------TGTGTACACACACATAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ....::......x...:.:......:..:.x:::.:.:.......::x:.:..:....:..x..:::...::.x...:x..:.:......:x..:.:.:--....x::....x..---------....:x..:.:x..:.. 99M2I14M9I17M 84/130 64.6% 141/94230402 0.0% 11/130 8.5% -24147643 -70082759 +3705 chr4 + 190214555 64868455 64868454 64868579 125 GTACACACATACATACATGTATACACATGTGCGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATG--------------CATACACATGTGTGTACACACACATACATGTATACACA chr4 - 94230402 73121076 73121075 73121213 21109190 21109189 21109327 138 GTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ......x..:.x.x..-....xx.x.:.....:.:..:.:x......:.:..::.:.x.x:::..x.....:..::...x:....:.--------------....:.x..::.:x:...x.x...:.........x:.. 16M1D70M14I38M 82/124 66.1% 138/94230402 0.0% 15/124 12.1% -8252621 -85977781 +4384 chr4 + 190214555 64868494 64868493 64868603 110 CACATACATACATGTATACACATGTGTGTACACACACATAC--ATACATGCATACACATGTGTGTACACACACATACATGTATACACATGTGTGTACACACACATACATACA chr4 - 94230402 89016087 89016086 89016198 5214205 5214204 5214316 112 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ....:.:x.:....:.:.....:..x..::.........:.--..:...:..:::.x........:..x....x.:.::::.:..:x...:...:x..::x:..:..x.:.. 41M2I69M 72/110 65.5% 112/94230402 0.0% 2/110 1.8% -24147593 -70082809 +3186 chr4 + 190214555 64868499 64868498 64868566 68 ACATACATGTATACACATGTGTGTACACACACATACATACATGCATACACATGTGTGTACACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:.:.x...:.....x....:.:.......:...::.....x:....:..x.::.::::...:.x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 57272086 NA +3804 chr4 + 190214555 64868505 64868504 64868626 122 ATGTATACACATGTGTGTACACACACATACATACATGCATACACATGTGTGTACACACACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACAC--ACGTTTGCGCACACACATGCAAATGCATACACGTAGATG--------TGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC ....::......x..::.:.......--..:.x:::...:.......::x:.:..:....:..x...--------......:.x....x::::..:...:.x..:.::::x.:..x:..... 26M2D39M8D47M 73/112 65.2% 112/94230402 0.0% 10/112 8.9% -24147577 -70082825 +3003 chr4 + 190214555 64868514 64868513 64868580 67 CATGTGTGTACACACACATACATACATGCATACACATGTGTGTACACACACATACATGTATACACAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...:.:.....::.....:.......::..:...:..x.:x..x..x::::.....xx:....:... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -2036332 -92194070 +4222 chr4 + 190214555 64868528 64868527 64868633 106 CACATACATACATGCATACACATGTGTGTACACACACATAC--ATGTATACAC----ATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACATACA chr4 - 94230402 89016087 89016086 89016198 5214205 5214204 5214316 112 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ....:.:x.:......:.....:..x..::.........:.--...:......----........:..x....x.:.::...::::x.::.:...x::.:x:.....x.:.. 41M2I10M4I55M 73/106 68.9% 112/94230402 0.0% 6/106 5.7% -24147559 -70082843 +3064 chr4 + 190214555 64868533 64868532 64868600 68 ACATACATGCATACACATGTGTGTACACACACATACATGTATACACATGTGTGTACACACACATACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:.:.x.........x....:.:.......:...::..::.x...:..::x.:::...:...::x... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 57272120 NA +3673 chr4 + 190214555 64868539 64868538 64868651 113 ATGCATACACATGTGTGT--ACACACACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATACACATGTG chr4 - 94230402 89016082 89016081 89016196 5214207 5214206 5214321 115 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTG ...:::......x..::.--........:.x:::.:.:.......::x:.:..:....:..x..:::...::.x...:x:.:.:......:x..:.:.:.x::.:x:....:x.. 18M2I95M 68/113 60.2% 115/94230402 0.0% 2/113 1.8% -24147543 -70082859 +4260 chr4 + 190214555 64868554 64868553 64868667 114 TGTACACACACATACATGTATACACATGTGTGTACACACACATAC--ATACATGTATACACATGCGTGTACACACACATACATACATGTATACACATGTGTGTACACACACATACA chr4 - 94230402 89016083 89016082 89016198 5214205 5214204 5214320 116 TGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ...:......:x.:....:.:.....:..x..::.........:.--..:...::.:::.x...:....:..x....x.:.::...::::x.::.:..:x::.:x:.....x.:.. 45M2I69M 72/114 63.2% 116/94230402 0.0% 2/114 1.8% -24147529 -70082873 +3945 chr4 + 190214555 64868554 64868553 64868681 128 TGTACACACACATA-----------CATGTATACACATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .......x....x.-----------.:...::.::...:.x::......:.:.:...x.x:::.:x::....:...:..x::....:x::...::..x:....:..:x:.:::.x....x.x...:.........x:.. 14M11I114M 79/128 61.7% 139/94230402 0.0% 11/128 8.6% -8252521 -85977881 +3286 chr4 + 190214555 64868562 64868561 64868630 69 CACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:.:.x...:.....x....:.:.......:...::.....x::...:..x.:..::::...:.x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 57272150 NA +4126 chr4 + 190214555 64868569 64868568 64868685 117 ATGTATACACATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATA--CATGTATACACATGTA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACAC--ACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ....::......x..::.:.......--..:.x:::.:.:........:x:.:..:....:..x..:::...::.x...:x..:.:......:x..:.:.:--....x::....x..:. 26M2D73M2I16M 75/115 65.2% 117/94230402 0.0% 4/115 3.5% -24147513 -70082889 +3092 chr4 + 190214555 64868579 64868578 64868694 116 ATGTGTGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATAC----ACATGTGTGTACACACACATACATACATGTATACACATGTATGTACACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACA--------CACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC .....:::...:x::...:..:...--------..:.:x..::.........:..x.::::..:..----.::......:.x....x::::..:...:.x..:.::::x:...x:..... 25M8D33M4I50M 66/108 61.1% 112/94230402 0.0% 12/108 11.1% -24147503 -70082899 +3835 chr4 + 190214555 64868584 64868583 64868701 118 TGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATACAC----ATGTGTGTACACACACATACATACATGTATACACATGTATGTACACACACATACA chr4 - 94230402 89016083 89016082 89016198 5214205 5214204 5214320 116 TGTGCACACATCTGCATGCA------CACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ...:......:x.:...:..------....::...x.:.:......:.:::.x...:......----........:..x....x.:.::...::::x.::.:..:x::.:x:.....x.:.. 20M6D37M4I55M 73/112 65.2% 116/94230402 0.0% 10/112 8.9% -24147499 -70082903 +3795 chr4 + 190214555 64868584 64868583 64868715 132 TGTACACACACATACATACATGTATACACATGCGTGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACA----------TGTATACACATGTATGTACACACACATACATACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAAC---TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .......x....x.x.:---....xx.x.:..:.::.:..:.:x......:.:..::.:.x.x:::..x.....:..::...x:....----------..x:....:..:x..:::.x....x.x...:.........x:.. 17M3D68M10I44M 84/129 65.1% 139/94230402 0.0% 13/129 10.1% -8252491 -85977911 +3630 chr4 + 190214555 64868618 64868617 64868749 132 TGTACACACACATACATA-------CATGTATACACATGTGTGTACACACACATACATA--CATGTATACACATGTATGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGT--ATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .......x....x.x.:x-------.:...::.::...:.x::......:.:.:...x.--....x:....:.:....:x::....:x:.--...::..x:....:..:x:.:::.x....x.x...:.........x:.. 18M7I34M2I29M2D49M 84/130 64.6% 139/94230402 0.0% 11/130 8.5% -8252457 -85977945 +3988 chr4 + 190214555 64868626 64868625 64868739 114 CACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTATGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACA chr4 - 94230402 89016087 89016086 89016198 5214205 5214204 5214316 112 CACACATCTGCATGCACACACACGTTTGCGCACACACATGC--AAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ....:.:x.:....:.:.....:..x..::.........:.--.x...:......:.:x....:::::..x.:..x.:.::::.:..:x...:...:x..::x:..:..x.:.. 41M2D71M 70/112 62.5% 112/94230402 0.0% 2/112 1.8% -24147461 -70082941 +4108 chr4 + 190214555 64868637 64868636 64868753 117 ATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTATGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTG chr4 - 94230402 89016082 89016081 89016196 5214207 5214206 5214321 115 ATGTGCACACATCTGCATGCACACAC--ACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTG ....::......x..::.:.......--..:.x:::.:.:.......:.x:.:..:....:..x..:::...::.x...:x..:.:......:x..:.:.:.x::.:x:....:x.. 26M2D89M 72/115 62.6% 115/94230402 0.0% 2/115 1.7% -24147445 -70082957 +3949 chr4 + 190214555 64868660 64868659 64868812 153 CACATACATACATGTATACACATGTATGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATG-TGTGCATGTATATATAC chr4 - 94230402 89016087 89016086 89016222 5214181 5214180 5214316 136 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAA------------------TGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ....:.:x.:....:.:.....:..x..::.........:..x.------------------.:..:....:..x..:::...::.x...:x..:.:......:x...:....x::.:x::.:..x.::..xxx..-.....x::...x:.:.. 44M18D74M1I17M 86/135 63.7% 136/94230402 0.0% 19/135 14.1% -24147427 -70082975 +3177 chr4 + 190214555 64868665 64868664 64868732 68 ACATACATGTATACACATGTATGTACACACACATACATACATGTATACACATGTGTGTACACACACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:.:.x...:.....x......:.......:...::.....x::...:..x.::.::::...:.x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 57272252 NA +3321 chr4 + 190214555 64868686 64868685 64868845 160 TGTACACACACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAAC---TGTAATCTCGTGTG----CATGCATATTCATACACATATACACAGAAG------------------CATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .......x....x.x.:---....xx.x.:....----..::..:..x......::........x:x.------------------....x:..:....:....x:..:::.x.:..:.:.:x:........x...:.:x::..x:x.:.:.:.::.... 17M3D14M4D30M18D74M 88/135 65.2% 135/94230402 0.0% 25/135 18.5% -8252389 -85978013 +3740 chr4 + 190214555 64868694 64868693 64868840 147 CACATACATACATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATG-TGTGCATGTATATATAC chr4 - 94230402 89016087 89016086 89016222 5214181 5214180 5214316 136 CACACATCTGCATGCACACACACGTTTGCGCACACACATGC--AAATGCATACACGT----------AGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ....:.:x.:....:.:.....:..x..::.........:.--.x...:......:.----------.x..:........x::.:x.:::..:.:..:x...:....x::.:x::.:..x.::..xxx..-.....x::...x:.:.. 41M2D14M10D63M1I17M 86/135 63.7% 136/94230402 0.0% 13/135 9.6% -24147393 -70083009 +3418 chr4 + 190214555 64868705 64868704 64868870 166 ATGTATACACATGTGTGTACACACACATACATACATGTATACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATGTGTATGTATATATACATAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACAC----------------ACACGTTTGCGCACACACATGCAAATGC--------ATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGC-TGTGCCCATATCCACAC ....::......x..::.:.....----------------....:.x..:.:........:::x:...--------.....::..x..:........x::.:x.:::..:.:..:x...:....x::.:x::.:..x.::..xxx..:-.:..:x:....x..:.. 24M16D28M8D72M1D17M 88/141 62.4% 141/94230402 0.0% 25/141 17.7% -24147377 -70083025 +3325 chr4 + 190214555 64868739 64868738 64868843 105 ATGTATACACATGTGTGTACACACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATA------TACATATGTGTGCATGTATATATACATA chr4 - 94230402 89016082 89016081 89016192 5214211 5214210 5214321 111 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACA ....::......x..::.:......:.:..x...::::.:.:..:..x..:....:::..:x....:.:.::.x.:.------:...:.:.x:...:..:x:..:x:..:. 77M6I28M 63/105 60.0% 111/94230402 0.0% 6/105 5.7% -24147343 -70083059 +3766 chr4 + 190214555 64868767 64868766 64868873 107 GTGTGCATGTATAT--ATACATATACATATGTGTGCATGTATATATACATATACATATGTGTGCATGTATATATACATATACATATGTGTATGTATATATACATACACA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .........:....--.....:...:.:.::x:x.....x:..:....:....x:..:::.x.:..:.:.:x:........x...:.:x:.::x.x.:.:....::.:. 14M2I93M 68/107 63.6% 109/94230402 0.0% 2/107 1.9% -8252334 -85978068 +3600 chr4 + 190214555 64868790 64868789 64868893 104 CATATGTGTGCATGTATATATACATATACA------TATGTGTGCATGTATATATACATATACATATGTGTATGTATATATACATACACATATATATGTGTATATGTATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:..::.....:.x:...:.........------:...x..:...:::....x::.:.::x:...:...:x...:.....x....:.x:.:.x.x::::.:....... 30M6I74M 66/104 63.5% 110/94230402 0.0% 6/104 5.8% -8252310 -85978092 +3217 chr4 + 190214555 64868813 64868812 64868884 72 ATATACATATGTGTGCATGTATATATACATATACATATGTGTATGTATATATACATACACATATATATGTGT chr4 - 94230402 38535895 38535894 38535966 55694437 55694436 55694508 72 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT .....:.:.:::..:....x:x...:.....:...:............::.....x:x...x:x::..x... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 26332918 NA +4077 chr4 + 190214555 64868818 64868817 64868921 104 CATATGTGTGCATGTATATATACATATACA------TATGTGTATGTATATATACATACACATATATATGTGTATATGTATATATACATACACATATATGTGTATGTATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:..::.....:.x:...:.........------:...x...::..::....x:.....:x:........x:..::....x....::x....x.x.:::::....... 30M6I74M 70/104 67.3% 110/94230402 0.0% 6/104 5.8% -8252282 -85978120 +3326 chr4 + 190214555 64868868 64868867 64868958 91 TACACATATATATGTGTATATGTATATATACATACACATATATGTGTATGTATATATACATATACACATATATGTGTATGTATATATACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATAC-TG-------------ATATAAACTTATATGTGTGTTTATATAATCAT ....::x.....x.:...:......:.........:..:...:-..-------------.....x..x.........:.x......xx... 43M1D2M13D32M 61/77 79.2% 77/94230402 0.0% 14/77 18.2% 12387632 NA +3143 chr4 + 190214555 64868877 64868876 64868959 83 ATATGTGTATATGTATATATACATACACATATATGTGTATGTATATATACATATACACATATATGTGTATGTATATATACATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.......:...::...x....::.:x..:..:......:x..:..xx...:.....:.:.:::::.x::.:.x..:x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 56473089 NA +3223 chr4 + 190214555 64868904 64868903 64868987 84 CATATATGTGTATGTATATATACATATACACATATATGTGTATGTATATATACATATACACACACATATATGTGTATATGTATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:...:.:...::...x....:..:x:.:......:.::x..:..xx.:.:.:.........:.:.x::::.x...x... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 56473117 NA +3299 chr4 + 190214555 64868906 64868905 64868979 74 TATATGTGTATGTATATATACATATACACATATATGTGTATGTATATATACATATACACACACATATATGTGTA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:.:.:::..:x.:.........::...x......xx..:.:...:.:..::...x........-......:.. 64M1D9M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% 27505866 NA +3038 chr4 + 190214555 64868915 64868914 64868973 59 ATGTATATATACATATACACATATATGTGTATGTATATATACATATACACACACATATA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ..:....x.:...x.........:.....x...:x.:....x.:.:.::..:.:..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 47348162 NA +3180 chr4 + 190214555 64868925 64868924 64868977 53 ACATATACACA--TATATGTGTATGTATATATACATATACACACACATATATGTG chr4 - 94230402 56650830 56650829 56650884 37579519 37579518 37579573 55 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG ....x.:....--......:..:..:..x....:.:................:.. 11M2I42M 44/53 83.0% 55/94230402 0.0% 2/53 3.8% 8218095 NA +3392 chr4 + 190214555 64868934 64868933 64869020 87 CATATATGTGTATGTATATATACATATACACACACATATATGTGTATATGTATATATACATACACATATATATATAGAGAGAGAGAA chr4 - 94230402 8395787 8395786 8395873 85834530 85834529 85834616 87 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ...:.:...:.:...::...x....:..:x:...:..:....:x..:..xx...:.:...:.....:.:.x.:.:.:.x::.x.:.. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 56473147 NA +3223 chr4 + 190214555 64868938 64868937 64869021 84 TATGTGTATGTATATATACATATACACACACATATATGTGTATATGTATATATACATACACATATATATATAGAGAGAGAGAAG chr4 - 94230402 81401300 81401299 81401383 12829020 12829019 12829103 84 TGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAG .:...x.:...x..x.x.:.......:.x:x:..:....:x:.:...:.:....x..::x.....:x..:..x.:....:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% -16532362 -77698040 +3032 chr4 + 190214555 64888281 64888280 64888334 54 AAAAAAAAAAAAAAAAAAAAAAGGAAAATAAATAAAATGAGGCAAACCTGTATT chr4 - 94230402 40155343 40155342 40155396 54075007 54075006 54075060 54 AAATGGAACAAAAAAAAAAAGAGAAAAAGAAATAAAGTAAAGCAGAACTGTGTT ...x::..x...........:..:....x.......:.:.:...:.x....:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 24732938 NA +3058 chr4 + 190214555 64936857 64936856 64936911 55 TTATATATATAAATATATACACACACATACATATATATATACACACACAAACATA chr4 - 94230402 15682768 15682767 15682822 78547581 78547580 78547635 55 TTATGTGGATGAATATGTACTTACACATACATACATTTACACCCTCACAAGCATA ....:.:x..:.....:...x:...........:..x..:..x.x.....:.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 49254089 NA +3065 chr4 + 190214555 64938944 64938943 64939063 120 ATTATGCAACTATAAAAAGAAGTAAATCCTCCTGTATTAGTCATGGTTCTCTAGAGGGACAGAACTAATGGAATATGTGTGTGTGTATATATATATGTATGTGTGTGTATATATATATAA chr4 - 94230402 52579726 52579725 52579821 41650582 41650581 41650677 96 ATTATGGCTACATCAAAAGAAGAAAA-----CTGCATT-------------------GAAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAA ......xxxx:..x........x...-----...:...-------------------..x.x....x..:::...:..........:.........:...:.:...x..xxx.x..:... 26M5D7M19D63M 71/96 74.0% 96/94230402 0.0% 24/96 25.0% 12359218 NA +5987 chr4 + 190214555 64963030 64963029 64963302 273 AGAATATATAAATGTTTATGTTTCT--CATTTTTTCTCCAGAGTAAACACA-CACATATCTGTGCATTATTC-TAAATCAATTAAACTTTCCACTTGCCAGTAAAAGTAGAAAAGGTCAAGCTCCTTTAAATAAAGGGTAATTAATATTTCCTTGCTGGATAAATGGGTGCTCAATGGTTAAAATTAATTTTCCTAAACAAGGGGATGAGTAACTATAAATGACATAAACAATATCAATAGTTTTACTCAG-GAAATTACAATGACATTTCAATAAAC chr4 - 94230402 41686160 41686159 41686428 52543975 52543974 52544243 269 AGAAAACAAAAGGGTTAATTTCTCTGCAATCTTTTTCTCCGAGTAAACAAAGCACATTTCCCTAGGTTCTTCATAGATCAATTGCATCTTCCGCACAGTAGTGCAGGTTAAAAAGGTCAGCCACCTTTAAATAAGCCCTAATTGACATTTACTTCCCAGA-ATGAGGGTTATCAAAGGTTAAGGTACATTTCCCTAGGCAGTCAGTGACCTAATTCTAAACATCATTAAT----CCAA----TTCACTCTGAAAAATAACACTGGCCTTTTGAAAAGC ....x.:.x..:x...x..x.:...--x..:....:::.x.........x.-.....x..:x.:x:..x...-..:.......:x.::....:.x::x:...:x.:..x:.........:x.x...........:xxx.....:.:....x...x.::..-.x:x....xx....x......::.xx....:....::..:xx:.xx:xx...:.x....::x...x..:----:...----..:....x.-:....x...x..:.x...::.x..:. 25M2I24M1I20M1I87M1D69M4D4M4D9M1I26M 172/264 65.2% 269/94230402 0.0% 14/264 5.3% 23276870 NA +3572 chr4 + 190214555 64986501 64986500 64986601 101 TGGCACCATCTCGGTTCACCACAACATCCACCTCCTGGATTCAAGCGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCGCCACCACG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:...x.:------.:...:.x:xx.x..:....:......:.x...x:xx.x........::.............:....--.:...:....:::. 12M6D67M2D14M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 46789387 NA +3209 chr4 + 190214555 65000008 65000007 65000075 68 AAAAAAAAAAAAAAAAGCACCACCACCAACAATAAACAACCAAGCAACCAAGCAAGCAATGTAGTGTT chr4 - 94230402 20330203 20330202 20330257 73900146 73900145 73900200 55 AAAAAAAAAAAAAAAACCACCACCACCACCAAAAAACAGTC-------------AGCAATGTAATATT ................x...........x...x.....::.-------------.........:.:.. 41M13D14M 48/55 87.3% 55/94230402 0.0% 13/55 23.6% 44669805 NA +3072 chr4 + 190214555 65088302 65088301 65088382 81 ATATATATATGTATGTGTATATATATATGTATGTATGTGTATATATATATATATATATATATATATATATATATATATACA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.:...x.....x..x.x....:..::..x.x...:..:..x:.:.:.:.:....x..:.x:....:x..:.... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -16312991 -77917411 +3069 chr4 + 190214555 65135209 65135208 65135266 58 AATAATCAAAAAGAAAGACAGTAAAAAAAAAAGAAAGAAAGAGAAGAGTTATGAAACA chr4 - 94230402 66946942 66946941 66946999 27283404 27283403 27283461 58 AACAAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATA ..:..x.....x....x...:x.....:...::...:......:...:.x:.....:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -1811733 -92418669 +3202 chr4 + 190214555 65150239 65150238 65150292 54 AAAAAAAAAAAAAAAACCATACATATATATATGTGTGTGTGTGTATATATATAT chr4 - 94230402 60606747 60606746 60606800 33623603 33623602 33623656 54 AAAAAAAAAAAAAAAACCAACCATGCATTAATGTGTGTGTGTGCATGTGTTTGT ...................xx...::..xx.............:..:.:.x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 4543492 NA +3526 chr4 + 190214555 65150848 65150847 65150960 113 CTTTCTTTCTCTCTCCCTTTC-TTTCTTTCTTTCTTTCTTTCTTTC-------------------------------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTT chr4 - 94230402 9693690 9693689 9693834 84536569 84536568 84536713 145 CCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT .:.....xx.....:...::.-x.:.:....x.:.x.......:.:-------------------------------:.....:..:..::.:.::....:..::.:x...:..x.:...x..x...:........:.....::. 21M1I24M31I68M 77/113 68.1% 145/94230402 0.0% 32/113 28.3% 55457158 NA +3922 chr4 + 190214555 65150849 65150848 65151031 183 TTTCTTTCTCTCTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTT-----TCTTTCTTTCTTTCTTTCTT---TCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCTTCCTTTCT chr4 - 94230402 28459089 28459088 28459276 65771127 65771126 65771314 188 TTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTC-CTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCT--CTGCCTTTTT ..x......x.x::....x...x:.:...::...:..:-..xx.x.::x..:.:x..:.xx.....::..:..:.xx..:..x:x:.:....:.....:x........:....:.:xx.::.:-----.x......x..xx.::.x::---.x.....x.....x...x.::.x.:...--..x.....:. 38M1D84M5I20M3I28M2D10M 113/180 62.8% 188/94230402 0.0% 11/180 6.1% 36691760 NA +3169 chr4 + 190214555 65150953 65150952 65151046 94 CTTTCTTTCTTTCTTTCTTTCTTTC-----------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCCCTTCCTTCCTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 23468157 23468156 23468261 70762142 70762141 70762246 105 CTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATT ....:...:...:..:....::...-----------x.:....xx...x..:..::.:.x.....xxxx.:...x..x..:...x:......x....:....x.. 25M11I69M 65/94 69.1% 105/94230402 0.0% 11/94 11.7% 41682796 NA +3209 chr4 + 190214555 65176235 65176234 65176300 66 CCAAGGTTGAGCATTAGGTTCTTTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTGAGAT chr4 - 94230402 62444480 62444479 62444545 31785858 31785857 31785923 66 CCATAGCTGAGCTTCTGGTTAGTTTTATCTTCCTTTTTCTTTCTTTTTTTTTTTCTCCTTGTAAAT ...x:.:.....x.:x....xx....x....:::....................:.::..xx.:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 2731755 NA +3196 chr4 + 190214555 65198994 65198993 65199044 51 GATAAAAGAAATGTGTATTTGTTTTATTGTGTTTTATTTCTTTGTTATTTG chr4 - 94230402 26870209 26870208 26870259 67360144 67360143 67360194 51 GACAAAAGAAATGTGCACTGGTTTTATTATGCTCTATTCTTTTTTTGTTTG ..:............:.:.x........:..:.:....::...x..:.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 38328785 NA +3460 chr4 + 190214555 65203552 65203551 65203667 116 ACTCCAGGAGAACATACACACACACACACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCCTATTTTGCTGAGTGAAAATATCTTCTCAAAAGAAGATATTGATGTA chr4 - 94230402 44044382 44044381 44044496 50185907 50185906 50186021 115 ACTCAAATAGCACATACACACAGAAACACATATTGACAGATAAACAGATATTCCCCCTCTTGTTTCCTCTTTTTCTTGTGAATG-CATTGTGAGCTTTAGAGAAAGTATTGATATA ....x.:x..x...........x.x.....:.:xx...x.:.x...x.:.:..:.:....:x:.::...:.x..:.xx...:..-x.x.:.xxx..:x.:....::.......:.. 84M1D31M 74/115 64.3% 115/94230402 0.0% 1/115 0.9% 21159170 NA +3343 chr4 + 190214555 65218691 65218690 65218767 77 GGAAGGAAGGAAAGGAAAGAAGGAAAGAAAGGAAGGAACGAAGGAAAGGAAGGAAGGAAAGGAAGGAAGGAAAGAAA chr4 - 94230402 16117437 16117436 16117513 78112890 78112889 78112966 77 GGAAGGAGTAGTAGTAGGATGGGAAAGAAAACTATTAGCAAAGGAAAGGAAGGAGGGAAAGGAAGAAAAATGAAAAA .......:x::x..x.:::x:.........:xx.xx.:.:..............:..........:..::x:.:... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 49101254 NA +3560 chr4 + 190214555 65218699 65218698 65218971 273 GGAAAGGAAAGAAGGAAAGAAAGGAAGGAACGAAGGAAAGGAAGGAAGGAAAGGAAGGAAGGAAAGAAAGGAAGGAACGAAGGAAAGGAAGGAATGGAAGGAAGGAAGGGAAGGAAGGAAGGGAGGGTGGGAAGGAAGAAAGAAAAAGAAAGAAAAGAAAAACTAGAGGGAGTTATTTAGTTATTTCAGCTGAAAGAAAAGCATGGTAATTAGTAAAATGAAAACATATAAAAGCAAACTC--TTACTAATAAAAATGAGTACACAAATTCAAAA chr4 - 94230402 72821454 72821453 72821697 21408706 21408705 21408949 244 GGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGG-----GGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAAT--------------AGAAAGAACCAGTAAAAAGGAAAATAAAAGTTCTTTTCA-TGATTTTGATATTGCTGCT----------CTTGG-AGTTAGTAAGAGAAAGGCACTTGAAAGAAAGATTTGTGACAAAGGAAAATATGTAGAAAGAACTGAAA .......x......:....x.::xxx.x.::....xx....:-----......:...:..:.......x:.xxx.x.x.:....::..::.:.x::.xxx...:...::::.x:..:x--------------..:.....xx.:x..:..:.....x....::.xxxxxx.-.x....x.x....x.x...----------.x...-.:.......:.x:..::..:x.:....x..:x.:--.x..x..x:.....:x...x.x.:.x:::... 42M5D71M14D39M1D19M10D5M1D34M2I32M 149/242 61.6% 244/94230402 0.0% 33/242 13.6% -7602755 -86627647 +3025 chr4 + 190214555 65218738 65218737 65218814 77 GGAAGGAAGGAAAGGAAGGAAGGAAAGAAAGGAAGGAACGAAGGAAAGGAAGGAATGGAAGGAAGGAAGGGAAGGAA chr4 - 94230402 16117437 16117436 16117513 78112890 78112889 78112966 77 GGAAGGAGTAGTAGTAGGATGGGAAAGAAAACTATTAGCAAAGGAAAGGAAGGAGGGAAAGGAAGAAAAATGAAAAA .......:x::x..x.:.:x:.........:xx.xx.:.:..............:x.:.......:..::x:.::.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 49101301 NA +3001 chr4 + 190214555 65218790 65218789 65218845 56 GAATGGAAGGAAGGAAGGGAAGGAAGGAAGGGAGGGTGGGAAGGAAGAAAGAAAAA chr4 - 94230402 7707310 7707309 7707365 86523038 86523037 86523093 56 GAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAA ..:.......::..xx...:....:::.........x...:.x.:...::..:... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 57511480 NA +3275 chr4 + 190214555 65237026 65237025 65237089 64 ATGTGTTTATGTACATGTTTGAATTTGTGTGTACATGTACATACACATACATGCATA-CAGAACT chr4 - 94230402 25393259 25393258 25393323 68837080 68837079 68837144 65 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACT ......x:....::....x..x.............:::...:..:..:..:.x.x..-....... 57M1I7M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% 39843767 NA +3018 chr4 + 190214555 65238219 65238218 65238293 75 TTTTATTGTGTGTGTATATGCATATATACATATATGAGTAAACACTAAGTTAATAGAGTTTTTCTGTGTCTTTTA chr4 - 94230402 10898947 10898946 10899021 83331382 83331381 83331456 75 TTCTATTTTATGTGTGTATATATATATACACATATACACACATAATGATTAAAGAGTGCTTCTGGTTGTCTTTTA ..:....x.:.....:...::.........:....:x::.x.:.x.:.x.x..x..x.:..:.xxx......... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 54339272 NA +3029 chr4 + 190214555 65238874 65238873 65238928 55 TATCTGTATATAATATATGCATACATGTTATATATGTATATAGGTATTATATATT chr4 - 94230402 56330040 56330039 56330094 37900309 37900308 37900363 55 TATGTGGGTGTAATATATACATACATATTATATACACACATATGTAGTATAGATT ...x..x:.:........:.......:.......:::.:...x...x....x... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 8908834 NA +3288 chr4 + 190214555 65274005 65274004 65274068 64 GTTCATACACGCACACACACAGACACGCACACATACACAGACACGCACACATACACACACATAT chr4 - 94230402 90815410 90815409 90815473 3414930 3414929 3414993 64 GCTCTTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCAT .:..x.::.:.:......:...x:::...........x.x...:.........x:.....x:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% -25541405 -68688997 +3635 chr4 + 190214555 65278516 65278515 65278621 106 ATAAATTAACAAATATGATAGTGGGCAGTTCTTTTCTTTTTTTTTTTCTCTCCTT--CTCCTCCTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTCTTTTTT chr4 - 94230402 27426789 27426788 27426883 66803520 66803519 66803614 95 ACAAATTAAGAAATGTGGAA-------------TTTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT .:.......x....:..:x.-------------..:.x.x.::.x..........--..x..x.::......:..................:...:.:.x::..x.:. 20M13D22M2I51M 69/93 74.2% 95/94230402 0.0% 15/93 16.1% 37851727 NA +3225 chr4 + 190214555 65278542 65278541 65278636 95 AGTTCTTTTCTTTTTTTTTTTCTCTCCTTCTCCTCCTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTGACAAGAACTCAC chr4 - 94230402 17018344 17018343 17018438 77211965 77211964 77212059 95 AACTCTTCTCCCATTCTATTCCTCTCTCTCTCCCCTCTCTCCATTTTCTTTCCCTTTCCTATTTGTCTCACACATGATTTCTTACAGAAACTAAC .::....:..::x..:.x..:.....::.....:.::.....x.:.....:::....::.x...x.:.:x:x:x.xx...:.x...::....x.. 95M 58/95 61.1% 95/94230402 0.0% 0/95 0.0% 48260198 NA +3158 chr4 + 190214555 65283174 65283173 65283229 56 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...:.......::.......x.....:...x::.........:.:..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 45578900 NA +3044 chr4 + 190214555 65283175 65283174 65283223 49 TATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 19704277 19704276 19704325 74526078 74526077 74526126 49 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ..x...:.......::.......x.....:...x::...........:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 45578898 NA +3081 chr4 + 190214555 65283180 65283179 65283228 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATGTA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x..................:.x:....:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 60876757 NA +3135 chr4 + 190214555 65283183 65283182 65283272 90 TATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATGTATATACAAACATGCAATAAATATATATTTCTCTATATATAATATA chr4 - 94230402 86633749 86633748 86633835 7596568 7596567 7596654 87 TGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATAAACAAA---GTTATAATTTCACATTATTTCTCATGTATCATA .:.:.x...:........x:.x....::.........x....x.....x.....---.:x....x.x:.:...x:.::x:..:..x:... 54M3D33M 60/87 69.0% 87/94230402 0.0% 3/87 3.4% -21350566 -72879836 +3015 chr4 + 190214555 65283199 65283198 65283254 56 TGTGTGTGTGTGTGTGTGTGTGTATATGTATATACAAACATGCAATAAATATATAT chr4 - 94230402 26165535 26165534 26165590 68064813 68064812 68064868 56 TGTTCGTGTGTGTTTGTGTGTATCTGTATATACATAAATATACAATAAGGACACAT ...x:........x.......:.x.:.:....:.:...:..:......:x.:.:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 39117664 NA +3073 chr4 + 190214555 65342524 65342523 65342598 75 TAAACATATAAGGAATATGTATACATATGTATATGTATGTATATCTGATGTGCCAGATATACATATATACATATA chr4 - 94230402 65911682 65911681 65911756 28318647 28318646 28318721 75 TAAACTTATAAGAACCATGTATACATATATATATACGTATGTATATGTTTCACCTGGGGCACATACAAGCTTACA .....x......:.x:............:.....:::.:.:...x..x.x::..x.:x::.....:.x:.x..:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% -569158 -93661244 +3328 chr4 + 190214555 65346064 65346063 65346123 60 GTGCCTCTTCTTTTCTCTCTCTTTTTTTTTTTTCTAATTTGTAGTTCTTTTATTTAAAAA chr4 - 94230402 58110450 58110449 58110508 36119895 36119894 36119953 59 GTACCTCTCCCCTT-TCTTACTATTTTTTTTTTCTGATTTGTTGTTCTTTAGTTTAAAAA ..:.....:.::..-...:x..x............:......x.......x:........ 14M1D45M 48/59 81.4% 59/94230402 0.0% 1/59 1.7% 7235614 NA +3461 chr4 + 190214555 65348653 65348652 65348752 100 ATTGGAGATATATATATATATATATATATATATATATATATA----TATAAAATATATATGTGTGTGTATATATATGTGTGTGTATATATATGTGTGTGCATAT chr4 - 94230402 87985338 87985337 87985441 6244962 6244961 6245065 104 ACTTAAGGTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT .:.x:..:.:.:.:.........x....:.:.:x:x..:.:.----.x.xx.::.x:..x.x::............x...:.:........:....x.:...:. 42M4I58M 66/100 66.0% 104/94230402 0.0% 4/100 4.0% -22636685 -71593717 +3197 chr4 + 190214555 65348737 65348736 65348815 79 ATATGTGTGTGCATATATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATATATATATATATATA chr4 - 94230402 81401293 81401292 81401371 12829032 12829031 12829110 79 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTA ....x.x....:x.:.:.x..x:x:......:..:x.x..:.....:x.............x..:.x:....:x..:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -16052556 -78177846 +3233 chr4 + 190214555 65348749 65348748 65348796 48 ATATATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTAT chr4 - 94230402 19704282 19704281 19704329 74526074 74526073 74526121 48 ACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT .:.......:..:.....x.:...:...x................x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 45644467 NA +3281 chr4 + 190214555 65348752 65348751 65348802 51 TATATATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x........:.:.......:.....x.x................ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 17259255 NA +3372 chr4 + 190214555 65348756 65348755 65348876 121 TATGTGTATATATATGTGTGTGCATGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTGAGACAGGGTCTCGCTCTGTCTCCTAGGCTGGAGTGCAGTGGT chr4 - 94230402 57691394 57691393 57691509 36538894 36538893 36539009 116 TAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATAT---TTTAATTTGCATTTTTTTAATATGAAGTTTGGAAATGCATC--AAGTTAGAATGGAATAGT ..x...:...:..::x......:...:x.........::..x....:x...x.....---...xx...x:x.......:.x.::::..:.x.xxx..:x..--.:.:.:..:..x.:.:.. 57M3D41M2D18M 76/116 65.5% 116/94230402 0.0% 5/116 4.3% 7657362 NA +3025 chr4 + 190214555 65348770 65348769 65348833 64 TGTGTG-----TGCAT---GTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 - 94230402 15882757 15882756 15882828 78347575 78347574 78347646 72 TGTGTGGTAGCTGCATTGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTT ......-----.....---......................:..xx.:.:.xx:.......:..x...x... 6M5I5M3I53M 53/64 82.8% 72/94230402 0.0% 8/64 12.5% 49466013 NA +3371 chr4 + 190214555 65348780 65348779 65348834 55 TGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTG chr4 - 94230402 19559296 19559295 19559350 74671053 74671052 74671107 55 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtg ..............................:.xx..x.....x.x.x..:..x.. 55M 46/55 83.6% 55/94230402 0.0% 0/55 0.0% 45789484 NA +3031 chr4 + 190214555 65348784 65348783 65348833 50 TGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735397 1495006 1495005 1495055 50 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT ..::.:.x.:...:...:..:.:...............:.x......... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -27386564 -66843838 +3038 chr4 + 190214555 65354060 65354059 65354106 47 TCTTATCTCTGTGCCTCAGTTTTCTCATATGTAAAATGAGGATAGCA chr4 - 94230402 89950177 89950176 89950223 4280180 4280179 4280226 47 TTTTGTTTCTGTGACTCAGTTTTCTTACCTGTAAAAGGAGGATAACA .:..:.:......x...........:.:x.......x.......:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -24596117 -69634285 +3129 chr4 + 190214555 65375743 65375742 65375809 67 AATGACCATTTTTAGTTTTTCATAGCACAGAAACACACACACATACACACACACACACACACACACA chr4 - 94230402 56248407 56248406 56248473 37981930 37981929 37981996 67 AATAAACACTTTTAGATTGTCACTGTTTGAAAGCAAAGACAAACACACACACACACATACACAAACA ...:.x..:......x..x...:x.:x:::..:..x.x...x.:.............:.....x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 9127336 NA +3060 chr4 + 190214555 65401040 65401039 65401080 41 GTGTGTGCATGTGTGTGTGTGTGAGAGAGAGAGAAAGAAAA chr4 - 94230402 81022622 81022621 81022662 13207741 13207740 13207781 41 GTGTGTGCATGTGTGCATGTGTTAGAGAGAGGGAGAGAAGA ...............::.....x........:..:....:. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% -15621582 -78608820 +3136 chr4 + 190214555 65401043 65401042 65401094 52 TGTGCATGTGTGTGTGTGTGAGAGAGAGAGAAAGAAAAAAAATCAATCATGT chr4 - 94230402 18982315 18982314 18982366 75248037 75248036 75248088 52 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGT ....::............x............:...::..::..:x..:x... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 46418728 NA +3496 chr4 + 190214555 65401886 65401885 65401927 42 TTTGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982313 18982312 18982354 75248049 75248048 75248090 42 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:.....:..............................::.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 46419573 NA +3367 chr4 + 190214555 65401886 65401885 65401923 38 TTTGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .......:....:......................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -16227176 -78003226 +3031 chr4 + 190214555 65401888 65401887 65401925 38 TGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....:..........x.................::.. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 46419571 NA +3455 chr4 + 190214555 65478560 65478559 65478625 66 CTCCTGAGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCAGGGATTACAAGTGTGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:...:.........x...x..x.x........::::......x..:.:....--:......... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 47281421 NA +3031 chr4 + 190214555 65518388 65518387 65518444 57 TGTTTGTTTGTAAATACATGTACTTATATTCACACACACACACACACCCACACACAC chr4 - 94230402 14964828 14964827 14964884 79265519 79265518 79265575 57 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......:x...:x.:..:....:x.....x..xx........::...x......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 50553560 NA +3230 chr4 + 190214555 65540730 65540729 65540787 58 GTGTATTTAACTGAGTTTTATTTCCTGATTTTTTTTTTCTTCTTTCTCTCTTCCCCCA chr4 - 94230402 62062421 62062420 62062473 32167930 32167929 32167982 53 GTGTGTTTGATTGAGCTTAATTTTCTTATTTTTTTTTTCTT-----TCTTTTCCCCCA ....:...:.:....:..x....:..x..............-----...:........ 41M5D12M 45/53 84.9% 53/94230402 0.0% 5/53 9.4% 3478309 NA +3826 chr4 + 190214555 65551239 65551238 65551442 204 TGTATATATTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGGAGTCAGCATATCATTTATT-------ATCTAAACCTATTTATGTTTGAGA------------GTGAAAGGAATCAGTTTTCATAATTACCCTAAGGGAATAGTGTAAAACAGAATG----GTTCCAGGAAAACCAGAATGTATATCTAACCTTTGAAAAAGC chr4 - 94230402 48089497 48089496 48089707 46140696 46140695 46140906 211 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-----TACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAAACTGTACCACTGTGAGAGA-----------CTAGATACAAAAAGAGAACAGAGCACAGCAGCTTGATTTGTTATGAGAAAAATAAAAAGTATATAGATCTGTTAAGAAAGC ....x:.x.x......:::........:....x.x................-----..:.:.x::x:x:..::..x........-------..:.:..:x:.:x:..:.:..x:.------------....:..:-----------x..:x...xxx...:...:..x.:.x.:...xx..----...x:::.....x:.:..x......xx.x.:x..:.:..... 51M5D28M7I24M12I8M11D35M4I42M 123/188 65.4% 211/94230402 0.0% 39/188 20.7% 17461742 NA +3036 chr4 + 190214555 65551261 65551260 65551300 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -24270021 -69960381 +3107 chr4 + 190214555 65572071 65572070 65572119 49 AAGATATTCTTTTTTCTCTATTCTTTTTCTAGTTTTACAACTGAAAATA chr4 - 94230402 79818799 79818798 79818847 14411556 14411555 14411604 49 AACATGTTCTTTTTTTTCTGTTCTTTTTTCAAATTCACAACTGAAAGTA ..x..:.........:...:........::.:x..:..........:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% -14246728 -79983674 +3667 chr4 + 190214555 65574454 65574453 65574775 322 AGAAAATAATTATAAATGT----AGTTAAATATTTGTGTAAATAAAAATTTATTAAA--ATGTCATTCCACATAA---------TGTAGTCTAAATGTCCAATACTGGAAAAATTATTAAATAAATTGCCAGAATAAATATGTCTCTCTCTATATATTGCTGTATATATA-----------TATACATATATATATATACACATATATATATACACATATATATACACATATATATATACACATATATATACATATATATACATATATATACATATATATACATATATATATACATATATATACATATATATATACATATATATATATATACACAGTAATTTTCTCAG chr4 - 94230402 4417179 4417178 4417503 89812900 89812899 89813224 325 AAAATATAACTGTAAAGCTCTCAGTTTAAACACTGCTGTTAT----AATTAATTAAAGTATTTCCTTCCAAATGACCTCAGGACTGTAGT--AAACTGTGATGTCTGGAAAACTTTTTGACGAAA-------AATACTGATTCATTTTTCT-TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAACTGAGCAATGC-----TTCATGCCTGTGTACA---ACACACAGAAATCTTGACAG .:..x....:.:....xx.----:x.....:.:.xx...x.x----....x......--..x..x.....x..:.---------......--...:xx:x.xxx........x..x..:.xx...-------....xxx..x:x.:.:...-..:..xx....x:...x.-----------..x.........:.:.:.....:.x:x.:....:...:x:x:.x::..:..:...xx.x:...x..x...:.:.:....x:..x.....:.-:.:.x.:..xx.:.....x..xx.xxx..:.-----.x:..:.x.:.:..:.---.:......x...:..xx... 19M4I19M4D11M2I16M9I6M2D33M7D19M1D18M11I91M1D31M5D16M3D20M 194/299 64.9% 325/94230402 0.0% 49/299 16.4% 61157275 NA +3408 chr4 + 190214555 65574601 65574600 65574704 104 TATATATATATACATATATATATATACACATATATATATACACATATATATACACATATATATATACACATATATATACATATATATACATATATATACATATA chr4 - 94230402 4417352 4417351 4417454 89812949 89812948 89813051 103 TATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ......:.:.:...:.:.x:x.:....:...:x:x:.x.:.....:...xx.x:...x..x............x...x:....::-:...x.:.:xx....... 85M1D18M 68/103 66.0% 103/94230402 0.0% 1/103 1.0% 61157249 NA +3889 chr4 + 190214555 65575972 65575971 65576124 153 TCAAAAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAG-------------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAA chr4 - 94230402 21758889 21758888 21759061 72471342 72471341 72471514 173 TCAAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA .....::..xx...:..:...:...x:..:...:::.:.-------------..:x.x:x...x..:x.x.:...x.x:x..x..x.:.....-------......:..............:::.:...:.x...x:.:..:xxx....:.:..xxx:x....:....:.x.. 39M13I41M7I73M 98/153 64.1% 173/94230402 0.0% 20/153 13.1% 43817083 NA +3083 chr4 + 190214555 65575979 65575978 65576035 57 AGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237704 9237703 9237760 84992643 84992642 84992699 57 AGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x::......:..:x..x.:...:.....:....:....:..:...:....::... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 56338275 NA +3987 chr4 + 190214555 65575982 65575981 65576147 166 AAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGA-AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAG------AAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ...:..x.x:x::...:x.::::.........::...:.::x......:x::.:.:.x::.xxxx:.............:.x....:x:..x.-......x..------......x.:x:x.:..:x.::x:..x...:...:.:.::...:x..x:...x...... 93M1I9M6D58M 97/160 60.6% 161/94230402 0.0% 7/160 4.4% 21522005 NA +3437 chr4 + 190214555 65576000 65575999 65576077 78 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 36858293 36858292 36858375 57372028 57372027 57372110 83 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA ......x.:xx..x.....x...::...:.........:.x..-----....::....:..:::x.::..x............ 43M5I35M 57/78 73.1% 83/94230402 0.0% 5/78 6.4% 28717707 NA +3039 chr4 + 190214555 65576002 65576001 65576106 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::...:x.x...:..x:.x..:...:..x..:..::..:..:.:.x.:. 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 4241301 NA +3096 chr4 + 190214555 65576004 65576003 65576092 89 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 31350830 31350829 31350918 62879485 62879484 62879573 89 AGGGAATGAAAGGATAACTAAAATACGGAAGAAAATACAACAGGAAGAATTGAAGAGGTGGAAGGAAAAGCAAGGAAAGGAAAATAAAA .:.:..x:..:::.x..xx...:x.x.:......:x.x:.x..:.....xx:....::x.:..:......x..:....:.....x.... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 34225174 NA +3266 chr4 + 190214555 65576006 65576005 65576106 101 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x......x.x.:::..x..x.:.....:.x.:...:.:.:.:..:. 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% 4241305 NA +3306 chr4 + 190214555 65576007 65576006 65576076 70 AAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..--::..x.::.::.:..:..............x........... 28M2I42M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% 40509022 NA +3359 chr4 + 190214555 65576015 65576014 65576086 72 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..x::..:x::...::::....::..........x........... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 40509030 NA +3276 chr4 + 190214555 65576016 65576015 65576167 152 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGA---AAAAGAAAGAGAGAGAGAAAGTA chr4 - 94230402 22272917 22272916 22273071 71957332 71957331 71957486 155 AAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAAATA ....:.:.:..:.:::.::...:.......:xxx.:..x..:xx..:...xx.xx....xx....::::x..x:..xx..:.::..:..:::..x..:x.x.:.:.::::......x..::.:.x....---:.:..:x...:x.xx.....:.. 129M3I23M 86/152 56.6% 155/94230402 0.0% 3/152 2.0% 43303099 NA +3106 chr4 + 190214555 65576035 65576034 65576106 72 AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:.:x:::..x.:.::::::....::..........x........... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 40509050 NA +3173 chr4 + 190214555 65576049 65576048 65576129 81 AGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA .......xx:::..:.........::........x::.x..:x.:..:.:..x.x.:.x....x..:x...x....:.:.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% -4677773 -89552629 +4038 chr4 + 190214555 65576051 65576050 65576191 141 AAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA--------AAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 65242436 65242435 65242584 28987819 28987818 28987967 149 AAATGAAAGACATGCAATAACATTGAAGAAAGGACAAAAAAAAAAAAAGAAAGATGTGCTAATACTCAAGTCAAGAGGATAAAGGAAGGTAAGAAAGTGAGATGAAGTGAGAAAGAGAAAAAATAAAACAGGTAAGTTAAAAAGGTAGG ...x:..::.x.x:x..x..x.xx:......:..x..:....:....::.....x:x.xx..x.--------..:.:..x..:::...:x.......x:...x:...x:...:.....:...:....:x.:.x...xx.::....x... 64M8I77M 90/141 63.8% 149/94230402 0.0% 8/141 5.7% 333615 NA +3261 chr4 + 190214555 65576063 65576062 65576145 83 GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA------GAAAAGAAAAGAAAAGA----AAAAAGAAAAGAAAAGAAAAGAAAGAAAGAA chr4 - 94230402 48787367 48787366 48787459 45442944 45442943 45443036 93 GGAAGATAGGAAAAAGAAGAGAAAGGAATACAGAACTTTTTAAAAAGGAATTCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAAGAAAGAA .:..::x.:::.......:.....:...x.x.:..------:.....:..xxx.....----.....:....:.....x..x........... 35M6I17M4I31M 62/83 74.7% 93/94230402 0.0% 10/83 12.0% 16788696 NA +3622 chr4 + 190214555 65576070 65576069 65576179 110 AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAGGAAGG chr4 - 94230402 58035036 58035035 58035145 36195258 36195257 36195367 110 AAACAAAAGAGGGGGCAAGGGAAGCAAATGAGTAAATTTAAAACAAACAAAGGAAAAAAAGAAAAACAAGAAAGAAAATGCTATTGGAAGATGAAAAACACGAAGGAAAG ...x......:::.:x...::...x...x:.:x:..xxx....x...x..:::..:.........:x...........x.xx.xx.::...x:..:x.x.x.......:. 110M 71/110 64.5% 110/94230402 0.0% 0/110 0.0% 7541034 NA +3260 chr4 + 190214555 65576089 65576088 65576160 72 AAAAGAAAAGAAAAGAAAAGAAAAGAAA--------AAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAGAGA chr4 - 94230402 21846953 21846952 21847032 72383371 72383370 72383450 80 aatataaaaGCACAAAAAAAAAAAAAAACCCACCACAGAGAAAGGAGAGGAAAGGGATGAAAGGGAAAAAGAGAGAGGGA ..x.x.....x.x.:....:....:...--------.:.....:..:.:....:.:.x.....::...:.:......:.. 28M8I44M 53/72 73.6% 80/94230402 0.0% 8/72 11.1% 43729136 NA +3584 chr4 + 190214555 65576092 65576091 65576191 100 AGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAG--GAAGGAAGGAAGGAAGG chr4 - 94230402 10903375 10903374 10903475 83326928 83326927 83327028 101 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAA-GAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAATGTGGG .....:..:..::...::.x.......x.x..-...x...:xx...x......:........:.:.xx......xx..:..x.--...x:......x.x:.. 32M1D50M2I17M 71/99 71.7% 101/94230402 0.0% 3/99 3.0% 54672717 NA +3191 chr4 + 190214555 65576122 65576121 65576184 63 AAAGAAAAGAA------AAGAAAGAAAGAAAAAGAAAGAGAGAGAGAAAGTAAAGGAAGGAAGGAAGGA chr4 - 94230402 37322376 37322375 37322444 56907959 56907958 56908027 69 AAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGA .........xx------..:..::...:.....:..............::.::....:.:....:x... 11M6I52M 48/63 76.2% 69/94230402 0.0% 6/63 9.5% 28253746 NA +3276 chr4 + 190214555 65596466 65596465 65596512 47 AACAAACAAACAAACCAAAAAAACAAACAAACAAAAAACAAAAAAAC chr4 - 94230402 61828079 61828078 61828125 32402278 32402277 32402324 47 AAAAAAAAGACAAACCAACAAAACAAACAAACAAAAAGCAATAAAAC ..x...x.:.........x..................:...x..... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 3768387 NA +3004 chr4 + 190214555 65608491 65608490 65608536 46 GAGACTCCATCTCAAAAAAAAAAAGAAAAAAAGAAAAAAGAAAATG chr4 - 94230402 71886270 71886269 71886315 22344088 22344087 22344133 46 GAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATG ...x:..:..x...:......................::x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -6277779 -87952623 +3119 chr4 + 190214555 65612010 65612009 65612057 48 CTCTCTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAGAAAAGAA chr4 - 94230402 79828830 79828829 79828877 14401526 14401525 14401573 48 CTCTCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAAGTGGA ......:..........:.....:........:::.....:..:x.:. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% -14216820 -80013582 +3274 chr4 + 190214555 65639741 65639740 65639802 62 TAAGTTTCTGTTTATTTCTGTTCATTAATTTTTCTTTCTGTTCCTCAGATTTGA--TTATCTCA chr4 - 94230402 60423090 60423089 60423151 33807252 33807251 33807313 62 TAAGTTTCA--TTATTTCTGTTCATTATCTTTTCTTTCTGTTCTCTATATTTGAGCTTATTCCA ........x--................x:..............:::.x......--....::.. 9M2D43M2I8M 51/60 85.0% 62/94230402 0.0% 4/60 6.7% 5216651 NA +3080 chr4 + 190214555 65644181 65644180 65644240 60 AAAAGGAAGCCATTTATGAGTATCTACACACACACACACCCCCATGCACACACATACACA chr4 - 94230402 43020230 43020229 43020289 51210114 51210113 51210173 60 AGAAGAAAGCCAGTTTGGAATATCTACACACACACACACCTTAGGAAACATACCTGCACA .:...:......x..xx..:....................::x:x:x...:..x.:.... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 22623951 NA +3048 chr4 + 190214555 65676283 65676282 65676356 74 AGAGAGATATATATAAATATATACAAATATATATATTTTATATATATATTTATATATAAATTTATAAATAAACA chr4 - 94230402 36248628 36248627 36248701 57981702 57981701 57981775 74 AGAGAAGAATATATAAATATATATAGATACATATATTTTCTGTAATTCTGTAAAACAAGGATTATCAATAATCA .....::x...............:.:...:.........x.:..xx.x.x..x.xxx.::x....x.....x.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 29427655 NA +3171 chr4 + 190214555 65676319 65676318 65676410 92 TTTATATATATATTTATATATAAATTTATAAAT----AAACATATGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 - 94230402 83983227 83983226 83983316 10247087 10247086 10247176 90 TTTATA---ACATCTAAATATAAA---ACAAAAGCGAAAAAATGCTTCCAAAAATATACATATGTGTGCATCTCTGTGTGTATTTGTGTGCATATA ......---.:..:..x.......---.:...x----...x..::x.x:.x.......:.........::.x.x.......:.x......:..... 6M3D15M3D6M4I59M 66/86 76.7% 90/94230402 0.0% 10/86 11.6% -18306908 -75923494 +3167 chr4 + 190214555 65676325 65676324 65676416 92 TATATATTTATATATAAATTTATAAATAAACATATGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406380 4406379 4406471 89823932 89823931 89824023 92 TATTTTTTCTCATGGGGATTGAGGTAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...x.x..:x:..:x::...x.x:x.x..:.....:xx.xx:....::.....:.:xx.:.:x....................x:....... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 61269945 NA +3024 chr4 + 190214555 65676349 65676348 65676402 54 AATAAACATATGTATATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704273 19704272 19704326 74526077 74526076 74526130 54 AATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...xx.x...::......x:.......x.....:...x::.............. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 45972076 NA +3265 chr4 + 190214555 65676363 65676362 65676420 58 TATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACACA chr4 - 94230402 48089497 48089496 48089553 46140850 46140849 46140906 57 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-TACACA .:...:.x.:.....::::........:....x.x................-...... 51M1D6M 46/57 80.7% 57/94230402 0.0% 1/57 1.8% 17586866 NA +6675 chr4 + 190214555 65682675 65682674 65682793 119 TGACATTTCAAAAGATGTGTTCAAATACATTTGCAGAGATATTTTTGAGTTCATTCAAGCCGAGCAGTACTTCTTATCTTTTGAAATGTCAGGTAGCTGGTCTAAAGAAAATGGAAACA chr4 - 94230402 78198524 78198523 78198642 16031761 16031760 16031879 119 TGACATTTCTCAAGATGAGGCCAAATGTGTTTACAGAAAGATTTCTGAGTGTATTCAAGCTGAAAGGTACTTCTCATCTTTTGAAATGTCAGACTGCTGCTCCAAGAAAAATGAGTACA .........xx......x.x:.....:::...:....:.x....:.....x:........:..:x:........:.................::x....x..:..::......::x... 119M 90/119 75.6% 119/94230402 0.0% 0/119 0.0% -12515849 -81714553 +3463 chr4 + 190214555 65698617 65698616 65698696 80 GTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTCCTCCTATTCCTCCTCCTC chr4 - 94230402 93005113 93005112 93005192 1225211 1225210 1225290 80 GCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCTC .:..x........:..:x........:x.xx:.x:.:...::..:..x......:x...:.x...::.x.....:.:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -27306496 -66923906 +3911 chr4 + 190214555 65731120 65731119 65731214 95 CCTTACAACAATCCTGTGAAACAGGTAGACTTTTCTGTCTCCGTATTTTAGGTGAGAAAACTGAGCCACATAGTGGTTTACTAACTTGGCTAAAG chr4 - 94230402 10729166 10729165 10729260 83501143 83501142 83501237 95 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG ...:....:.x:.......:::.....:x:x:.x:::x....:.x..x:.....:..........x......xx....x.x...:...x.:.:.. 95M 64/95 67.4% 95/94230402 0.0% 0/95 0.0% 55001954 NA +3627 chr4 + 190214555 65732057 65732056 65732166 110 TATACACACATATATATATACATATACACACATATACATATATACATATATACACATATACACATATATACACATATATACATATATACACATATATATACATATATACA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATAT--ACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:..::.....x:...:......--.....x.x:...:x:......::..:.x:..:..:x:.....:::x:..:...:.x...::.x..:.x.x.:...:..:..:. 25M2D83M 68/108 63.0% 108/94230402 0.0% 2/108 1.9% -7389045 -86841357 +3297 chr4 + 190214555 65732064 65732063 65732127 64 ACATATATATATACATATACACACATATACATATATACATATATACACATATACACATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x.:.......:.::.:x..:.x.:....x...:..:..:........ 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 48211315 NA +3412 chr4 + 190214555 65732074 65732073 65732163 90 ATACATATACACACATATACATATATACATATATACACATATACACATATATA--CACATATATACATATATACACATATATATACATATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x::......xx:.:....:..::...x:.:.:..x....:.....:...:--.x.......x..x..:.x......:..x:...::.:. 53M2I37M 61/90 67.8% 92/94230402 0.0% 2/90 2.2% 37788537 NA +3035 chr4 + 190214555 65732087 65732086 65732148 62 CATATACATATATACATATATACACATATACACATATATACACATATATACATATATACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ....:.x..::.....x..:..:.:.:.:..:...:......x.:......x..:::..:.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 58135675 NA +3603 chr4 + 190214555 65732094 65732093 65732230 137 ATATATACATATATACACATATACACATATATACACATATA------TACATATATACACATATATATACATATATACATATATACATATATATACATATATACACACATATATATAGGTGTGTGCTTCTGTGTGTGTGTATA chr4 - 94230402 4417343 4417342 4417483 89812920 89812919 89813060 141 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAACTGAGCAATGCTTC-ATGCCTGTGTACA ..x..x.............:.:.....x:x.:.:..::..:------.:..:..:..:xx.x::..x..x.....:......x..:x.....::-..:.x.:..xx.......x.:x.:xxx:......-:..:x......:. 41M6I47M1D34M1D13M 89/135 65.9% 141/94230402 0.0% 8/135 5.9% 61314751 NA +3037 chr4 + 190214555 65732134 65732133 65732195 62 ATACATATATACACATATATATACATATATACATATATACATATATATACATATATACACAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC .....x..::.:...x..:....:.:.:.::...:......x.:......x..:::..:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 58135721 NA +3030 chr4 + 190214555 65744747 65744746 65744804 58 TGTTTGTTGTATTTGTATTTTGTTTTGTTTTTCTTGTTTCTTTACTCACACATTTTCT chr4 - 94230402 51070715 51070714 51070772 43159631 43159630 43159688 58 TATTTGTTGTGTTTTTGTTTTGTTTTGTTTTTCTCATTTATTTGATTATTTGCTTTTT .:........:...x.:.................::...x...:x.:.:x:::...:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 14674032 NA +3083 chr4 + 190214555 65793508 65793507 65793558 51 TGGGAGATTTTCTTTTTTCTTTTTTTTTTTTTGGAAACAGAGTCTCGCTCT chr4 - 94230402 75519844 75519843 75519894 18710509 18710508 18710559 51 TGGAGGATTTTCTTCATTCTTTTTTTTTTTTTAAAGAAAAAGTCTTGCCTT ...::.........:x................::.:.x.:.....:..::. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% -9726336 -84504066 +3238 chr4 + 190214555 65800600 65800599 65800671 72 TATATAAATACACACGTATATATATATATGTTGACACATACACTTACATATACATATATGTCTGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..::...:.x:....:..:...:...::xx..:..:.:...x.:...x..x.......x...x...... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 13319364 NA +3080 chr4 + 190214555 65851944 65851943 65851997 54 TCGGTCTTTTTAGTGGTGTTGTTGTTTTGTTTTTTTGAAGTTTATATTTTAAAT chr4 - 94230402 91774312 91774311 91774365 2456038 2456037 2456091 54 TCAGCTTTTTTGGTGGTTTTGTTGTTTTTTTTCTTTTAAATTTGTATAATAAAT ..:.::.....:.....x..........x...:...x..:...:...xx..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -25922368 -68308034 +3130 chr4 + 190214555 65888735 65888734 65888837 103 ATTAAGATTATCTTCATTTTATGGTAGAGGATACTGAGGCACAGAACAGTAAAATAATTTGCCCAAAGTCATAGAGCTACAGAAAGTTACAAAACTAGAATTT chr4 - 94230402 15193216 15193215 15193310 79037093 79037092 79037187 95 ATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCT--------TGTCAGAAATAAAATTT ..:.xx...x..:x........:x.x.::.:x.:...::.x....xx.:........:..x..:..:......x....--------.xx..:..x..:..... 78M8D17M 65/95 68.4% 95/94230402 0.0% 8/95 8.4% 50695519 NA +3069 chr4 + 190214555 65902159 65902158 65902233 75 TTTCAATATTATTTAGTTCTGCTCTAATATTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTC chr4 - 94230402 78951541 78951540 78951613 15278790 15278789 15278862 73 TTTCAAT--CATTTAGTACAACTGGAGTGGTTGTTTCTTTGTTTTCTTTTTTCCATTTTTTTTTTTAAGGAAGTC .......--:.......x.x:..xx.:.:x..........x....:......::x.........xx:.x.:.... 7M2D66M 54/73 74.0% 73/94230402 0.0% 2/73 2.7% -13049382 -81181020 +3002 chr4 + 190214555 65902167 65902166 65902221 55 TTATTTAGTTCTGCTCTAATATTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37306410 37306409 37306464 56923939 56923938 56923993 55 TTATTCACTTCTGTTTTTAACTTTATTTCTTTTTCTTCTTTTTTTTCTCTTGTTT .....:.x.....:.:.x.xx...:.........:..:........:.:..x... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 28595757 NA +3093 chr4 + 190214555 65963277 65963276 65963426 150 CATATATAAAGTATATATATACACACACACATATATGTGTGTATATATACATATCACATTGTATGTATATATGTATGTATATATACATATCACATTGTATGTATATATGT---ATATGTATACATGATACATACATATATACCACATTTTATT chr4 - 94230402 40224622 40224621 40224771 54005632 54005631 54005781 150 CATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATAT-GTGTTCAATATA-ATTTGTTGATTCTGCATTCATTACACACATAAGTA-ACTAAATGTTGTT ...:.......:xx...:x..:...:.:::.xx.x.x....:.xxx:x...x..:x.xx...:...:.:.......:....x........-:::..xx..:..-..x...---x.x..:..x...x.:...:.:.x:..-..:.x..x..:.. 90M1D12M1D6M3I26M1D13M 95/147 64.6% 150/94230402 0.0% 6/147 4.1% 25738655 NA +3055 chr4 + 190214555 66001072 66001071 66001135 64 TACAACTTCAAGGCCTGAAAAAAAAAAAAAGAAAGAAAAAAACAGAGGTCTGAAAATCCATTGC chr4 - 94230402 65994236 65994235 65994299 28236104 28236103 28236167 64 TAAATCTTTAGGCACTGAAAAAAAAAAAAATAGCAAGAAATATTAAGGTCTGAAAATTCTTTGC ..x.x...:.:.xx................x.:x:.:...x.:x:............:.x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 6836 NA +3442 chr4 + 190214555 66053034 66053033 66053093 60 TGCCAAAGGTTTTTGTTTTGTTTTGTTTTTGTTTGTTTTGTTTGTTTTGTTTTTTTCCCA chr4 - 94230402 7804459 7804458 7804517 86425886 86425885 86425944 59 TGCCGGAGGATTTT-TGTTGTCAAGTTTTTTTTTGTTTTGTTTGTTTGGTTTTTTTCCCA ....::...x....-.x....:xx......x................x............ 14M1D45M 50/59 84.7% 59/94230402 0.0% 1/59 1.7% 58248575 NA +3110 chr4 + 190214555 66093042 66093041 66093105 64 TATGTACATATATATGTGTGTGTACATGTGTGTGTATATATATGTGTGTATATATATGGAGAGA chr4 - 94230402 35554958 35554957 35555021 58675382 58675381 58675445 64 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGA ..x:..:..x.:x:........:....:..x.............::.::.x.x..:..x..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 30538084 NA +3031 chr4 + 190214555 66094825 66094824 66094934 110 TAGCAAATTAAAAGGGAAAGATACAGGAAAAGAGAGAAAGAGGGAGTGCGAGCAAGTGAGCAAATCAAATGAAAAACTGTTGGATAAGTTTCTGCTATCCTAGATGATGT chr4 - 94230402 20486973 20486972 20487082 73743321 73743320 73743430 110 TAGCAAGTACAAATGAAGATAGGGAGGGAGGCGGAGCAAATGAGAGAGAGAAAAAAAAAACAAGTGAAAGGAAACACTGTAGATGTGGATTTTGCTGTCTAAAATGATGT ......:.xx...x.:.:.x.x:x...:.::x:...x..:x.:...x.x..:x..:x:.:...:.x...x....x.....x.:xxx:.x..:....:..:x.:....... 110M 67/110 60.9% 110/94230402 0.0% 0/110 0.0% 45607852 NA +3188 chr4 + 190214555 66124547 66124546 66124588 42 TTTGTGTGTGTGTGTGTGACAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982313 18982312 18982354 75248049 75248048 75248090 42 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:................xx..................::.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 47142234 NA +3059 chr4 + 190214555 66124547 66124546 66124584 38 TTTGTGTGTGTGTGTGTGACAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ............:.....xx.................. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -15504515 -78725887 +3151 chr4 + 190214555 66124549 66124548 66124586 38 TGTGTGTGTGTGTGTGACAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .................x................::.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 47142232 NA +3239 chr4 + 190214555 66159333 66159332 66159411 79 AAGTAATAGCAATAATAAAAGAACAATGAAAAAAAAAAGAAATCAAGAAAACAGTCTCACTTATGAGCATATCAAAAAG chr4 - 94230402 8876773 8876772 8876851 85353552 85353551 85353630 79 AACCAACAACAGCAACAAAATAATAAAGAAAAAAAATAAACCCCAAAAAATCAAACCCATCTCTGAGCGTCTCAGAAAG ..x:..:.:..::..:....x..:..x.........x.:.xx:...:...x..:x.:..::.x.....:.x...:.... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 57282560 NA +3111 chr4 + 190214555 66173033 66173032 66173102 70 ATGTACATAAATACTTATACACAAATACATATATATGTGTATGTATATATATGTATACATATGTGTGTAT chr4 - 94230402 71630136 71630135 71630205 22600198 22600197 22600267 70 ACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .:..:...:x...:x:.:.........:.:....x.x......:..:.:.x..:..:::x..:.....:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% -5457103 -88773299 +3759 chr4 + 190214555 66199472 66199471 66199609 138 TCTTTTTCTTTATTCTTCTTTTTTCTTTCCTTCCTTCCTTCCTTTTTTCCTCTCTCCCTTCTTTGTTCCCTCTTCCTTC-CTTGCCTCCCTTTTTCCTTTCCTCCTTTTCTTCTCTCCTTCTTTGTTTTTTTTTTTTCC chr4 - 94230402 28459063 28459062 28459201 65771202 65771201 65771340 139 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCC ..x....:...x.x..xx:...x.:x..x...:..x:x:.....x:..x:...........:.:x.xx.x...x::...-..:xxx.:.:.:......:.xx.::..x.x:.:.:::..::...:..:.:......... 79M1I59M 85/138 61.6% 139/94230402 0.0% 1/138 0.7% 37740409 NA +3240 chr4 + 190214555 66199547 66199546 66199614 68 CTTCCTTGCCTCCCTTTTTCCTTTCCTCCTTTTCTTCTCTCCTTCTTTGTTTTTTTTTTTTCCAAGAA chr4 - 94230402 46769686 46769685 46769753 47460650 47460649 47460717 68 CTTGCTTTTGTCTCTTTCTTCTTTGCTGCTTACCCCCCCCTTTTCTTTGTTTTGTTTTTTTCTAAGGA ...x...x:x..:....:.:....x..x...x:.::.:.:::...........x........:...:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 19429861 NA +3009 chr4 + 190214555 66211211 66211210 66211278 68 CGGCAAAAAACAAAACAAACAAACAAAAAAAAACCCACCTTTTTTAAAATGCACAAGTAGCTTGTGTT chr4 - 94230402 66237607 66237606 66237674 27992729 27992728 27992796 68 CGGTTGAGAAAAAAACAAACAAACAAAAAAAAAAACCATCATCATAAAATGTACAAGAACTTTGTTTT ...:x:.:..x......................xx.xx::x.:x.......:.....x.x:....x.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% -26396 -94204006 +3293 chr4 + 190214555 66218633 66218632 66218725 93 TTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081932 43081931 43082024 51148379 51148378 51148471 93 TCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:......:...:......:..x::..::x.x.:::x....xx:.:.xxx:....x.:.:.....:...:...:...x.xx..::........ 93M 59/93 63.4% 93/94230402 0.0% 0/93 0.0% 23136701 NA +3321 chr4 + 190214555 66218639 66218638 66218733 95 TCTTTTCTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCT----TTTTCTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTTT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTT--TTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..::.:......:..--..:.....:..x:::.:.x.x..:.x...:xx....----..:.x.........:...........x.xx:.::......:. 15M2D36M4I42M 65/93 69.9% 97/94230402 0.0% 6/93 6.5% 23136711 NA +3102 chr4 + 190214555 66218645 66218644 66218717 73 CTTTTCTTTCCTTCTTTCTTTCTTTTTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTCT chr4 - 94230402 8141248 8141247 8141320 86089083 86089082 86089155 73 CTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ....x..x..::........x:.:x..:.::..x.......:...:....:.:.x.x:.:....:..::::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 58077397 NA +3192 chr4 + 190214555 66218670 66218669 66218751 82 TTTCTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCT-------CTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGATGGAG chr4 - 94230402 20485333 20485332 20485421 73744982 73744981 73745070 89 TTACTGCTTTCTATTCTTTTGTTTTTATTTCTCTCTCTCCATCTACAATCCATCTTCCCTGTTTTGTTTTTTTTTTTCTCCAGAAGGGG ..x..x......x..::...x.....x.....:...:..:x...-------x....:.:.x:...x...........:.::x..x..:. 44M7I38M 59/82 72.0% 89/94230402 0.0% 7/82 8.5% 45733337 NA +3146 chr4 + 190214555 66235813 66235812 66235872 60 GAGTTTTTGTTGTTGTTGTTGTGTTTGTTTGTTTTCTTTTGCTTTTTCAAG--ATGGCCACA chr4 - 94230402 79435098 79435097 79435159 14795244 14795243 14795305 62 GGGTTTTTGTTGTTGTTGTTGTAGTTGTTTGTTTGCTTTTATAAACACAAGAAATGACCACA .:....................:x..........x.....::xxx:x....--...:..... 51M2I9M 48/60 80.0% 62/94230402 0.0% 2/60 3.3% -13199285 -81031117 +3297 chr4 + 190214555 66251742 66251741 66251848 107 AAAAAAAAGAACAACAACAACAAAAAGAATATAAGGGAAGTTTTTCTACCGTCTTATAACTTAATTAGCATAATGCTACTGAATCATGCTTATCCTTTGTGGAAAAA chr4 - 94230402 70351545 70351544 70351629 23878774 23878773 23878858 85 AAACAGACAAACAACAACAACAAAAAGAATACCTGAAAAGTTTTTCTGCTG---------------------ATACTTCTGAATTCCTTTT-TCTTTTGAGGAAAAA ...x.:.x:......................:xx.::..........:.:.---------------------..:..x......:x:x:..-..:....x....... 51M21D19M1D15M 65/85 76.5% 85/94230402 0.0% 22/85 25.9% -4099803 -90130599 +3079 chr4 + 190214555 66284438 66284437 66284512 75 AATGAATATATATATATATATATATATATATATATATATATATATATATACACACATATATACAATTATTTCTCT chr4 - 94230402 8681912 8681911 8681977 85548426 85548425 85548491 66 AATGGATATCCATGTCTG---------ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTT ....:....x:..:.x.:---------.....x..........:...::.........:...:..:.x...:.:. 18M9D48M 50/66 75.8% 66/94230402 0.0% 9/66 13.6% 57602526 NA +3033 chr4 + 190214555 66309608 66309607 66309645 38 TGCATGCACACACACACTATATATATATATATATATAT chr4 - 94230402 71295533 71295532 71295570 22934833 22934832 22934870 38 TATATGCACACACACACTATATATATATGTATGTATAT .::.........................:...:..... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% -4985925 -89244477 +3661 chr4 + 190214555 66337062 66337061 66337122 61 GCTTCCAAGTTCAAGTGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCGCA chr4 - 94230402 18197138 18197137 18197198 76033205 76033204 76033265 61 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .....:::.........x...x:xx.x........::..................x.:... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 48139924 NA +3164 chr4 + 190214555 66354371 66354370 66354436 66 TTCCTTCACTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTGTTTTTTG---TTTTTTTTGAGATGGAGT chr4 - 94230402 46961850 46961849 46961918 47268485 47268484 47268553 69 TTTCTTCCTTTTTACCTCTCTGTTTTTTCTTATTGTTTTGGTTTGTTGCTTTTTTTTTTGAGAAGTGGT ..:....x:....:::.x.:........x..:.......x....x...---............x.x:.. 48M3I18M 51/66 77.3% 69/94230402 0.0% 3/66 4.5% 19392521 NA +3280 chr4 + 190214555 66390591 66390590 66390654 64 GCAAATAACAGAATTTTTTGTTTGTTTGTTTTGTTTTGTTTTCTAGATGGAGTCTCACTTTATT chr4 - 94230402 9440350 9440349 9440413 84789990 84789989 84790053 64 GCAATTAAACTGTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTCTGGATGAGAGCATATGTCATT ....x...xxx:x...............................:....:::x.x:.:x.:... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 56950241 NA +3082 chr4 + 190214555 66405294 66405293 66405363 70 TTTGTATATTTCTGTGTGTGTGTGTGTGTATGTGTGTGTGGGTATATATGTGTGTGTATATATGTATATA chr4 - 94230402 39267139 39267138 39267208 54963195 54963194 54963264 70 TCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA .::.....xx.x.....:..x.:.:::..:xx........x.......x.....::.x.:....x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 27138155 NA +3329 chr4 + 190214555 66405484 66405483 66405556 73 AATAAAATTCTATTCTTTCAAAATGTCTAAAGTACTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTGAG chr4 - 94230402 28570450 28570449 28570522 65659881 65659880 65659953 73 AATGGAATTCTGTGTTTTCAAATGAAGGAAATCACTGTTTTTTCCTTCCCCCTCTTTTTTTTTTTTTCTTGAG ...::......:.x:.......xx:xxx...x:...x....:.::..:.:::...............:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 37835034 NA +3009 chr4 + 190214555 66418696 66418695 66418755 60 ACAACGAAAACAAAACCGAACCAAACAAACAAAAAAACAACAAT-----AGAAAAAGCTAATAAA chr4 - 94230402 31694636 31694635 31694700 62535703 62535702 62535767 65 ACCACCAAAACAAAACTAAAACAAACAAACAAAAAAACAACTATTTCAAAGTAGGTACTAATGAA ..x..x..........::..x....................x..-----..x.::x:.....:.. 44M5I16M 48/60 80.0% 65/94230402 0.0% 5/60 8.3% 34724060 NA +3010 chr4 + 190214555 66425792 66425791 66425850 59 AAGGAATGGAAAAAAAATATTCCATGGAAATGAAAAGCAAAAAAAAAAAAAAAAAAGCA chr4 - 94230402 56710740 56710739 56710798 37519605 37519604 37519663 59 AAGAAATGAAACAAAAGCCTTCCAGGGTAAACAACAACAAAAGAAGAAGAAAAAAAGCA ...:....:..x....::x.....x..x..xx..x.:.....:..:..:.......... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 9715052 NA +3400 chr4 + 190214555 66440680 66440679 66440756 77 ACAGATATAGATATGCCATGTATACCATATATATATATATATATATATATACATATATATATATATTCTTTTTTCTT chr4 - 94230402 8681907 8681906 8681982 85548421 85548420 85548496 76 ACTAAAATGGATAT-CCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTT ..x:.x..:.....-......x.:x:...x..........:...::.:.:.....:.....xx.x..:......:.. 14M1D62M 56/76 73.7% 76/94230402 0.0% 1/76 1.3% 57758773 NA +3095 chr4 + 190214555 66564636 66564635 66564684 49 AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAATAATTCTCTTCTT chr4 - 94230402 33737989 33737988 33738037 60492366 60492365 60492414 49 AAAAAAAAAAAAAAAGATAGAAATGAAGAAAAAGTGTATTTCCCATCTT .................x.....x:.........x:..x...:.x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 32826647 NA +3146 chr4 + 190214555 66602132 66602131 66602206 75 ATAAATACCCTGGGTTCTCACTCATATGTAGAAGCAAAAAAACAAATAAACAAAACAAAACAAACAAACAAAAAA chr4 - 94230402 24339879 24339878 24339946 69890457 69890456 69890524 68 ATAAAAACCC--AGTTCTTTCTAG-----AAAAGTGATAAAAGAAATTAATAAAACAAAACAAACAAACAAAAAA .....x....--:.....:x..x:-----.:...::.x....x....x..:........................ 10M2D12M5D46M 55/68 80.9% 68/94230402 0.0% 7/68 10.3% 42262253 NA +3146 chr4 + 190214555 66627215 66627214 66627299 85 TATAGATATATATCTGTTTGTATATATATATCTAGATGTGCATGCACACACACACACACATGCACACACACACATCTTCTACTGA chr4 - 94230402 14964814 14964813 14964894 79265509 79265508 79265589 81 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACA----TGCACACACACACACTGTTGACTGA .:.:..:.:.x..x......::.:.::.:.:x.:x....::..:..xx........----..............::x.:x..... 56M4D25M 55/81 67.9% 81/94230402 0.0% 4/81 4.9% 51662401 NA +4585 chr4 + 190214555 66667511 66667510 66667596 86 CCAATTCTCATTACAATCTTTGTCACTGCAATGAATTCACGGTGTATCATTTTCCATCCTTGTTATATTCTTTGTCAGAAAAATGA chr4 - 94230402 44013198 44013197 44013282 50217121 50217120 50217205 85 CCAATTCACACAGCAATCATTGCCACCAGAATGCATTCATGTTGTGCCATTTTCCAT-CTTGTTATAACCTTTGTCACAAGAATGA .......x..:x:.....x...:...::x....x.....:.x...::..........-.........x:........x..:..... 57M1D28M 67/85 78.8% 85/94230402 0.0% 1/85 1.2% 22654313 NA +3079 chr4 + 190214555 66679446 66679445 66679519 74 ATATATATATGTATGTGTGTATATATACGTATATATACGTATATATATTTGTGTGTGTATATATATATACATGG chr4 - 94230402 81401293 81401292 81401366 12829037 12829036 12829110 74 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGG ....x.x.:...x.....x..x.x...::..:...x:x...:..:..xx............x..:.x:.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% -14721847 -79508555 +3224 chr4 + 190214555 66702566 66702565 66702646 81 CTCTTTATAGATAAGTAGATAGATAGATATATCTCCACATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAAATG chr4 - 94230402 67274479 67274478 67274559 26955844 26955843 26955924 81 CTCCCTGCATGTTAGGCAGCAGCTAAGCATTTTGTCACTTAAATATGTATATATAGAGAGAAGGAGAGAGAGAGAAATGTG ...::.::.x:.x..xx:::..x..:::..x.:x:...x..x....:..............::............:.x:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% -571913 -93658489 +5923 chr4 + 190214555 66723540 66723539 66723778 239 TCTTTACCACAATTAGATGGATTTAAGTCAGTTT----TTATTTCTACTTGAGTAACATGAAATTTGGTTTACAGCTCTTTTTTCAACCCCTACATTCATAATTAAATGACTAAATCCCATCCACAGCATTACCCACAGAACAAGATTGGAGAAAGATTATCCATTAAAGAGAGAGGGCATTGCTATTATGGCTTTTGAAGACTATAGCCATGCACTCTCTTAGGAATCCTATTATGGCTGAG chr4 - 94230402 41253534 41253533 41253768 52976635 52976634 52976869 235 TTCTCAGCCCAGTAATTTGGATTTATGTCACTTCAAAAGTAGTTTCCTTTGAGGAACAGGAACACCAGATTAAAGCTTTATT--------CCAGACAGGTAATTAAAAGGCTAAATCCCATGTACAGCATTATAACTCTAATATGGATAGAAGAGGATTGCTCATTAGAGTCCATAGGGATTTCTATTATGACTCTAGGAAAAGATAGCCACCCGTCTCGTTGTGAATCCTATTACAGCAAAG .::.:.x.x..:.x.xx........x....x..:----x..x..::x:.....x....x...xx:::.x...x....:.x..--------.:.x.:xx:........x.:...........x:.........:xxx:xx..:.x.:x.:..::.:....:::.....:..xxx:x:..x...x........:..:.x.:.:.xx.......:x.:::::x..:x...........::..x:.. 34M4I44M8D153M 144/231 62.3% 235/94230402 0.0% 12/231 5.2% 25470006 NA +3088 chr4 + 190214555 66761566 66761565 66761643 78 GAAACAACAACAACAAAAACAACAAAAACAAACAAACAAAAAGCTTGACTAATGGTGAGATATTTCTTCTATATTAAA chr4 - 94230402 87979338 87979337 87979415 6250988 6250987 6251065 78 GAAAAAAAACCAACAAAACCAACAAAAACAAACAAACAAAAACAGTTATTGCTCGAAAATCAGTTCTTCAGTGACAAA ....x..x.x........x.......................xxx.x.:.:x.x.x:.:x:.x......x:.:x:... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% -21217772 -73012630 +3014 chr4 + 190214555 66799329 66799328 66799389 61 ATGAGTGGGGAATGAAGGGCTTTGCAGCGCATTTCTTTTTTTTTTTTTGTTTGTTTGTTTT chr4 - 94230402 64624506 64624505 64624566 29605837 29605836 29605897 61 ATGTGCGGGTGATGTGTGGTTTGGTGGTGGTTTTTTTTTTTTTTTTTTGTTAGTTTGTTTT ...x.:...x:...x:x..:..x.::.:.xx...:................x......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 2174823 NA +4418 chr4 + 190214555 66835028 66835027 66835188 161 CTTCCTTCCTTTTTCTTTTCTTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTTTTGACAGAGCCTCACTCTGTCCC chr4 - 94230402 43081900 43081899 43082058 51148345 51148344 51148503 159 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTT--TTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAACGCCATTTGCCACAGCCCCGTGCTCTCCC ..:........:x.x:..:xxxx.x:.x...:.....--......::..:::..:.x......x.x::::x....xx.:..xxx:....x.........:...:.......x.xx..::........x.xxx:x::x....x..x....:.::x..x.... 37M2D122M 100/159 62.9% 159/94230402 0.0% 2/159 1.3% 23753128 NA +3592 chr4 + 190214555 66835032 66835031 66835158 127 CTTCCTTTTTCTTTTCTTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTT--TTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:....::.::x.x...:xxxx.x.:x...:.....--......::..::...:.x....:.x.x:.::x:...xx.:..xxx::.:.x.........:...........x.xx:.::........ 37M2D88M 78/125 62.4% 125/94230402 0.0% 2/125 1.6% 23753132 NA +3409 chr4 + 190214555 66835064 66835063 66835162 99 TCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTT--TTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:.....--......:::.::...:.x:...:.x.x::::x:...xx....xxx::.:.x.....................x.xx:.::........ 9M2D88M 64/97 66.0% 97/94230402 0.0% 2/97 2.1% 23753136 NA +3091 chr4 + 190214555 66887784 66887783 66887841 58 ATTTTCACAACAACAACAACAACAACAACAACAACAACAAAAAAATTAAAATGAATTT chr4 - 94230402 79230829 79230828 79230886 14999517 14999516 14999574 58 ATCTTCAAAACAAACAAACAAACAATAACAACAACAACAAAAAAACCCACATAAATTT ..:....x.....xx.x.xx.....:...................::x.x..:..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% -12343045 -81887357 +3551 chr4 + 190214555 66891338 66891337 66891399 62 AAAAAAACAAGCCAAACCAAACCAACCAAACAAACAAACC--AAAAACC-----ACTCTAGGTAAACAT chr4 - 94230402 2717933 2717932 2718001 91512402 91512401 91512470 69 AAAAAAACATACCAAACCAAACCAACCAAACAAAAAAACCCAAAAAACCTGTTGGCTCTGTGCAAATAT .........x:.......................x.....--.......-----:....:x.:...:.. 40M2I7M5I15M 54/62 87.1% 69/94230402 0.0% 7/62 11.3% 64173405 NA +3096 chr4 + 190214555 66932371 66932370 66932442 72 ATAATTTTAAAAAGATAAAAAAGAATAAAAATAAATAAAT--AAAATGTTTTTAAAAAGTGAAAAAAAAAAAAA chr4 - 94230402 19975031 19975030 19975104 74255299 74255298 74255372 74 ATAAATTGAAAAAGATACAAAAGAATAGCACTTAGTAAATGCAAAACTTTTTTAAAGAAAAACAAACAAACAAA ....x..x.........x.........:x.x.x.:.....--....:x........:.:x:.x...x...x... 40M2I32M 55/72 76.4% 74/94230402 0.0% 2/72 2.8% 46957340 NA +3079 chr4 + 190214555 66993338 66993337 66993384 47 CATAAATATATATGTATGTGTATATATACATATATAAATGTATTTAT chr4 - 94230402 3236598 3236597 3236644 90993759 90993758 90993805 47 CATAAATTCATAGGTACATGTATTTATACACATACAAATGTATTTAT .......x:...x...::.....x......:...:............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 63756740 NA +3072 chr4 + 190214555 67058360 67058359 67058459 100 GGCAACAAAGGGAGACTCCATCTCAAAAAAAAAAAAAAAAAGCTGTTGTATTTTGACTACTCAATATCCATTTGTCTTCCACAATAGAGATAGCCTTGAG chr4 - 94230402 10503756 10503755 10503855 83726548 83726547 83726647 100 GGTAAGAAAGTTATAATCCTCTGCTGTAAAAAAAAAAAAAAGTTATTGTACTAAATTGAATCAGTAGTCATTGGTGTACATCAGAAGTGATAGCCTTGGG ..:..x....xx.x.x...x::x.x:x...............:.:.....:.xx:x:x.x...:..x:....x..x.x.xx..:x..x..........:. 100M 65/100 65.0% 100/94230402 0.0% 0/100 0.0% 56554604 NA +3327 chr4 + 190214555 67109857 67109856 67109930 74 GAAAGAAAGAGAAAGAAAGAAAGAAAAGAGAGGAAGAGAGGGAGGGAGGGAGGAAGGAAGGGAGAAGGAGAGAA chr4 - 94230402 40472541 40472540 40472614 53757789 53757788 53757862 74 GGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAA .:::....:.:..::...:..:.....:.:....:.:.:...:...:....xxx.:..:.x..:..:..x:... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 26637316 NA +4066 chr4 + 190214555 67109886 67109885 67110003 118 GAGGAAGAGAGGGAGGGAGGGAGGAAGGAAGGGAGAAGGAGAGAAAGAGAGAAAGGAAAGAAGAAAGAAGAGAGAAAGAAAAAAAGCAGACAGAAAGAGAGAAATAAAGAAAGAAAGA chr4 - 94230402 11253652 11253651 11253767 82976636 82976635 82976751 116 GAAGAAGAAATGAAGGAAGA-ATAACAAAGGGGACTCAGACAGAAAAAG-GAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGA ..:.....:.x.:...:..:-.x:.x::.:....xxx:..x.....:..-.......:...:..:...x.....xx.x.x..........::....::x..:.:x..x:.....x... 20M1D28M1D68M 79/116 68.1% 116/94230402 0.0% 2/116 1.7% 55856234 NA +3672 chr4 + 190214555 67109927 67109926 67110066 140 AGAAAGAGAGAAAGGAAAGAAGAAAGAAGAGAGAAAG---AAAAAAAGCAGACAGAAAG-AGAGAAATAAAGAAAGAAAGAAAAGTAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAAGTATAAAGATCTTAGAAACCAAG chr4 - 94230402 29503818 29503817 29503956 64726447 64726446 64726585 139 AAAAAGAGGGAAGGAAAAGA-GAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGA----TAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAG .:......:...:.:.....-........x.......---.......x.xx...:..:.-........::.:x.x:..x..----...x:.:x.....:.x.xxx....xx.x:..:..x..x:......x::x::...:.x.. 20M1D16M3I19M1I21M4D59M 93/135 68.9% 139/94230402 0.0% 9/135 6.7% 37606109 NA +3291 chr4 + 190214555 67109928 67109927 67110048 121 GAAAGAGAGAAAGGAAAGAAGAAAGAAGAGAGAAAGAAAAAAAGCAGACAGAAAGAGAGAAATAAAGAAAGAAAGAAAAGTAAAGAAAAGAAAAGAAAAG--AAAAAGAAAAGAAAAAGTATA chr4 - 94230402 72526229 72526228 72526351 21704052 21704051 21704174 123 GAAAAATGGAAAGAGAAAAAAATAGAATATTTGAGAGAGCAAGGCAGACAGGAAAAACAGTCTGAAAGAATCAGAAAGAAAAAAGAAGAGGAACTAGCTGCAAAAAAGAAGAGAGACAGCATA ....:.x:.....::..:..:.x....x.xxx:.:::.:x..:........:..:.:x::xx.:..::..xx.::..:.:x......:..:..xx.:xx.--........:...:.x..:... 100M2I21M 73/121 60.3% 123/94230402 0.0% 2/121 1.7% -5416301 -88814101 +3257 chr4 + 190214555 67133852 67133851 67133954 103 AAAAAAAAAAAGGAAAGAAAGAAAGAAAAGAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAATAC chr4 - 94230402 44053989 44053988 44054091 50176312 50176311 50176414 103 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGC ..:..x::.:::........::...:.:.x......:x::.:.:.x::.xxxx........:...:.:.x.....x:..x.x.:....x::..::..x...:. 103M 62/103 60.2% 103/94230402 0.0% 0/103 0.0% 23079863 NA +3268 chr4 + 190214555 67133853 67133852 67133963 111 AAAAAAAAAAGGAAAGAAAGAAAGAAAAGAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAATACGTGGTACAT chr4 - 94230402 54828363 54828362 54828473 39401930 39401929 39402040 111 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAGACAAAGTCCAT .:..........x........:.x...x:...xxx.:xx.x:..x.:x::..::.::.x:.x.:x.:xx....:..:::.......x....:...:...x..:x:..x... 111M 68/111 61.3% 111/94230402 0.0% 0/111 0.0% 12305490 NA +3002 chr4 + 190214555 67133871 67133870 67133950 80 AGAAAGAAAAGAAGAAAGAAAGAAAGGAAGAAAGGAAGAAAGGAAGGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGA chr4 - 94230402 10903375 10903374 10903454 83326949 83326948 83327028 80 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGA ......:.:.:.::.....x.....::x:x..:::x...:xx...x......:........:::.xx.:.:.:.x..... 80M 51/80 63.8% 80/94230402 0.0% 0/80 0.0% 56230496 NA +3071 chr4 + 190214555 67147021 67147020 67147093 73 TATATATATATATATATATATATATATATACACACACTACACAGACACACACACACACACACACACATACACC chr4 - 94230402 67999876 67999875 67999948 26230455 26230454 26230527 73 TGTATGTGGACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGACTTGCACC .:...:.:x.:.:.:.:..::........x..::.....:.:.x.:.:.::......x.x...x..x.:.... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% -852855 -93377547 +3552 chr4 + 190214555 67187164 67187163 67187237 74 CTGCAACATCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTTAGCTTTCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.x:xx.x..:.::........:.x...x.xx.x..:...:..:...........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 48990038 NA +3058 chr4 + 190214555 67205420 67205419 67205489 70 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTTATGCCTCAGCCTCTCCACTATCTGGGATTACAGGT chr4 - 94230402 18197126 18197125 18197195 76033208 76033207 76033277 70 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT ..:..:..:xx.x..:.::..........x...x:.x.x........:..x.x..x....:.:....x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 49008294 NA +4024 chr4 + 190214555 67208482 67208481 67208622 141 TCTGCCTTTAATTCTGTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAAATAGGATTATCACCTACTTTACAAAGTCTTTGTAAGTAAAAGT chr4 - 94230402 18982281 18982280 18982387 75248016 75248015 75248122 107 tctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGT--------------------------------GAGAGAGAGAGAGAGAGAGGA--AGGATTTATTTTGTGATAATTTTGTGCCTGAGAGT ...x:....xx..:.x...................................--------------------------------..:...........:.x....--.xx.::..:...:::.x:x:.....:xx.:.:... 51M32D21M2D35M 81/107 75.7% 107/94230402 0.0% 34/107 31.8% 48226201 NA +3045 chr4 + 190214555 67216252 67216251 67216318 67 CTCCAGAAAAAAAAAAAAAAAGGAGTGGG--GGGGAAGAAAGAGCAAAAGAAAGAGGAAAGGAAAGGAA chr4 - 94230402 37794323 37794322 37794391 56436012 56436011 56436080 69 CCCAGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAAA .:.x:..................:.x...--...x::.:::...x....:....:..:::..:..::.. 29M2I38M 47/67 70.1% 69/94230402 0.0% 2/67 3.0% 29421929 NA +3121 chr4 + 190214555 67216336 67216335 67216428 93 GGAAAGGGAAGGGAAGGGAATGGAAGGGAAGAGAAGGGGAGGGGAGGGGGAGGGGAGGGGAAGGGAGGGGGAGGGGAGGGGGGGAAGGGAGGG chr4 - 94230402 40465776 40465775 40465868 53764535 53764534 53764627 93 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .::......x.:x...::x:x.:..:..x.......x:::...:.:x...x.x......:::.::..:..:.:..:::....::..:.x.::. 93M 54/93 58.1% 93/94230402 0.0% 0/93 0.0% 26750560 NA +3053 chr4 + 190214555 67216387 67216386 67216479 93 GGGGAGGGGAAGG-GAGGGGGAGGGGAGGGGGGGAAGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGGGAGGGGAAAGGAGGGGGGGAGGGGAAG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG ..:..:....x.:-:..::x...:::...x:.:....x:.....:.:x..:x.x......::..:::....::.:::......:::.:.x:... 13M1I80M 55/93 59.1% 94/94230402 0.0% 1/93 1.1% 26750612 NA +3013 chr4 + 190214555 67216416 67216415 67216478 63 GGGGAAGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGGGAGGGGAAAGGAGGGGGGGAGGGGAA chr4 - 94230402 37794327 37794326 37794389 56436014 56436013 56436076 63 GGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAA ..::..:::.:::::.:...:.....x...x:........:::...::........:..::.. 63M 40/63 63.5% 63/94230402 0.0% 0/63 0.0% 29422089 NA +3208 chr4 + 190214555 67230187 67230186 67230243 57 TTTCTGTTTCTTATTCTCTCCCTGTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 76538986 76538985 76539038 17691365 17691364 17691417 53 TTTCAGTATCTT----TCTCCCTGTTTATTTGTGTTCTTTTTTTTTTTTTTTTTTGA ....x..x....----...........x...x.x..:.................... 12M4D41M 47/53 88.7% 53/94230402 0.0% 4/53 7.5% -9308799 -84921603 +3190 chr4 + 190214555 67252877 67252876 67252957 81 CTGCAACCTCTGCTTCCCAGGTTCAAGCCATTCTCCTGTCTTAGCCTCTCAAGTAGCTGGGACTACAGGCACATGCCACTG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTG ..:..:..:xx:x:.:.::........:xx...x.xx.x..:.....:............:......x.::..--...... 73M2D6M 55/79 69.6% 79/94230402 0.0% 2/79 2.5% 49055751 NA +3270 chr4 + 190214555 67319334 67319333 67319403 70 TATCTGTCTATCTATCTATCTATCT-----GTGTGTGTGTGTGTGTATATATATATTTATGTATGTGTGTATATA chr4 - 94230402 70982600 70982599 70982674 23247729 23247728 23247803 75 TATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATA ...x.:.:...::..x..x..x.:.-----..........:.....:..:....:..:..:x........::... 25M5I45M 52/70 74.3% 75/94230402 0.0% 5/70 7.1% -3663266 -90567136 +3389 chr4 + 190214555 67319340 67319339 67319409 70 TCTATCTATCTATCTATCTGTGTGTGTGTGTGTGTATATATATATTTATGT-----ATGTGTGTATATATTTGTG chr4 - 94230402 19559276 19559275 19559350 74671053 74671052 74671127 75 TTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtg .:.x.:..x....:.x.:.x.........................x...::-----..x.x.......x:..... 51M5I19M 55/70 78.6% 75/94230402 0.0% 5/70 7.1% 47760064 NA +3197 chr4 + 190214555 67319399 67319398 67319474 76 ATATATTTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATACATATATAT chr4 - 94230402 81401293 81401292 81401368 12829035 12829034 12829110 76 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGAT ....x.......x.....x..x.x.......:...x:x:..:..:..x:.:.:.:.:....x..:.x.....:x.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% -14081894 -80148508 +3235 chr4 + 190214555 67336304 67336303 67336410 107 AAGAAAGAAAGAAAGAGAGAGAGAAAAAAA--GAAGAAAGGAAAGAAAGCAAGA--AAGCAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAAGAAGAGAAA chr4 - 94230402 30533171 30533170 30533281 63697122 63697121 63697232 111 AAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAA ...:..........::::.:....:...:.--.x::...:.x..:::xx.....--...xxx....xx:.::..x:.:....:.....:.:..x.xx.:....:....:.. 30M2I22M2I55M 69/107 64.5% 111/94230402 0.0% 4/107 3.7% 36803133 NA +3150 chr4 + 190214555 67348559 67348558 67348655 97 GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGAAAGAAAGGAAGGAAGGAAGGGAGGGAGAGAGAAAGAAAGA chr4 - 94230402 30232146 30232145 30232242 63998161 63998160 63998257 97 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAA .....x..:.x.:::xx..:.::x:..:.::x...:..x....:.:.:xx...:....:..x..x.........:..:x:x..::::.....:..:. 97M 58/97 59.8% 97/94230402 0.0% 0/97 0.0% 37116413 NA +3064 chr4 + 190214555 67367059 67367058 67367106 48 GAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGGAGAAAAAG chr4 - 94230402 41477419 41477418 41477466 52752937 52752936 52752984 48 GACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGG ..x...x.:.....x.:...............:....:...:....:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 25889640 NA +4089 chr4 + 190214555 67369411 67369410 67369522 112 AAATAATTTAACCCTCAGATTAGTCCTATGAGATCAGTTCTATTATTGCTATCTTCATTTAACAGATGAAAACATGGAGGTTCAGAGAGGCTAAGTAACCTGCCCAGGGTCT chr4 - 94230402 10729155 10729154 10729263 83501140 83501139 83501248 109 AATTGATTTAGCC-TCACAATACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT ..x.:.....:..-...x.x..x:...:....:.x:..x--....:.:::.x..:.....x....:..::..x.:x....:x..x.x...:.......::.......:.... 13M1D25M2D71M 76/109 69.7% 109/94230402 0.0% 3/109 2.8% 56640256 NA +3640 chr4 + 190214555 67385567 67385566 67385634 68 ATCAGACAAGAGAAAG---AAAAGGAAAAGAAAGAAAAAGGAAGGGGAGGGGGAGGGGAGGGGGGAAGGAG chr4 - 94230402 58845091 58845090 58845161 35385242 35385241 35385312 71 ATTAAAAAAAAGAGAGCTGAAATGGAAAAAAAAAAAAAAAAAGGGGGGGGGGGAGGGGAGGGGGCATGTAG ..:.:.x..:...:..---...x......:...:.....::.:....:................x.x.x.. 16M3I52M 53/68 77.9% 71/94230402 0.0% 3/68 4.4% 8540476 NA +3149 chr4 + 190214555 67385580 67385579 67385649 70 AAGAAAAGGAAAAGAAAGAAAAAGGAAGGGGAGGGGGAGGGGAGGGGGGAAGGAGGGGGAGGGGAGGGGA chr4 - 94230402 40465789 40465788 40465858 53764545 53764544 53764614 70 AAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGA .....x::......:x...:..:x:.:...:.:x...x.x......:..:.::::..::...:....... 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 26919791 NA +3166 chr4 + 190214555 67385704 67385703 67385821 118 AGGGAAGGGAAGGGAAGGGAAAGGAAGGGAAAGGAAGGGAAGAGAAAAAGAGAAGGGAAGGGAAAAAGAGAAGAGAAGA--AAAGAAAAAAGAAAAGCATCAAAATTGGAAAACAAGAAG chr4 - 94230402 60992644 60992643 60992758 33237645 33237644 33237759 115 AAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAA---CAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCAT--GCAAACAGTGAG .:.::..:x..:.x.:::x..:::x...:..:..........x.......x.....:..---x..::x......:x...--.....x...:..:..:xx...:x..--.x.....:x:.. 59M3D17M2I25M2D12M 75/113 66.4% 115/94230402 0.0% 7/113 6.2% 6393060 NA +3285 chr4 + 190214555 67442682 67442681 67442741 60 TGTACATG--TATATATACATACACATATATGTGTACATATATGTGTATGTATACACACATA chr4 - 94230402 37363042 37363041 37363103 56867300 56867299 56867361 62 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .......:--.:.........:....x....:.xx:::...............x......:. 8M2I52M 48/60 80.0% 62/94230402 0.0% 2/60 3.3% 30079640 NA +3113 chr4 + 190214555 67485829 67485828 67485878 50 TTTTATGGATGAAGAAACTGAGGCACAGAGAGGTTAAGTAATTTTCCAAG chr4 - 94230402 10729209 10729208 10729258 83501145 83501144 83501194 50 TTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG .....::.:..:::.............x.x..............x..x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 56756620 NA +3259 chr4 + 190214555 67491434 67491433 67491503 70 ATTTAAATAT-TTCATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..x.....:.-..:.x.x:.:.:::.:.:.:....:.:.......:.:.............x.....x... 10M1I60M 51/70 72.9% 71/94230402 0.0% 1/70 1.4% 34092631 NA +3087 chr4 + 190214555 67491444 67491443 67491503 60 TTCATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 62409757 62409756 62409816 31820587 31820586 31820646 60 TTCATCCATACAGAGAGATATATATATATATCAATATAGAGAGAGAGATTGATACAGAAA .....x:...:.x.x.x..............xx...............xx..x.x...:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 5081687 NA +3054 chr4 + 190214555 67504063 67504062 67504114 52 TGATGCTTCCCGATCAGTGGTGAATGGGGCAAAAAAAAAAAAAAAAAAGAAC chr4 - 94230402 4718758 4718757 4718809 89511594 89511593 89511645 52 TAATACTTTCTTCTAAGTGGTGAATAGGGGAAAAAAAAAAAAAACAAAAAAC .:..:...:.:xx.x..........:...x..............x...:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 62785305 NA +3240 chr4 + 190214555 67509147 67509146 67509255 109 AGATGATTTGGCTCACTGAAATA--CCAACAGCATTTATAT---------TTGCATATAAACATATACACATACACACACACACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964765 14964764 14964884 79265519 79265518 79265638 120 AAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...xx..x.:x....x...x.--.x..xx..........---------x..x.:.:...:..:.x::.:.:::.....::::.:::.:.:...xx........::............. 23M2I16M9I70M 72/109 66.1% 120/94230402 0.0% 11/109 10.1% 52544382 NA +3210 chr4 + 190214555 67509176 67509175 67509307 132 GCATTTATATTTGCATATAAACATATACACATACACACACACACACACACACACACACACACACACACACACACACACACATCTCAGGCTAAATTTATTTCCAAATTAAATTCT-TTAAACAATGTAGCTCTT chr4 - 94230402 8395790 8395789 8395909 85834494 85834493 85834613 120 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT----------GAATAAA---AAACCCAAACTACATTCTGGCAAATAAGGTAGGTATT .::.x...:.x......x.x.::...x:.....:::.::.x:...:xx.:.................x.....x.:----------.:x....---.xx:.....:..x.....-x:...:..x....x.x.. 76M10D7M3D18M1I18M 81/119 68.1% 120/94230402 0.0% 14/119 11.8% 59113386 NA +3163 chr4 + 190214555 67509181 67509180 67509250 70 TATATTTGCATATAAACATATACACATACACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...x..:::........:..:x:.:.:.:::.::.x:...:xx.:.................x..... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 59113388 NA +3170 chr4 + 190214555 67509181 67509180 67509239 59 TATATTTGCATATAAACATATACACATACACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.....:.:.:x...::.::.::..:.:...xx........::............. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 52544355 NA +3086 chr4 + 190214555 67509182 67509181 67509256 75 ATATTTGCATATAAACATATACACATACACACACACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.x..:..:.:x:....x...::..:x:...:.:::.::.x:...:xx.:.................x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 59113394 NA +3117 chr4 + 190214555 67515472 67515471 67515509 38 AAAAAAAAAAAGAGAGAGAGAGAGAGATTGGGGACAAT chr4 - 94230402 44621321 44621320 44621358 49609045 49609044 49609082 38 AAAAAAAAAGAGAGAGAGAGAGAGAGACTGTGGACAAT .........:.................:..x....... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 22894151 NA +3123 chr4 + 190214555 67562058 67562057 67562130 73 GAGACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAGAGAAAGAAAGAAAAGAAAAAGAAAGAAA chr4 - 94230402 24662120 24662119 24662191 69568212 69568211 69568283 72 GAGAC-CAGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAA .....-.x.:...................:.xx::.:x..:::.:...:.x.:..:.:...x....:.:.... 5M1D67M 51/72 70.8% 72/94230402 0.0% 1/72 1.4% 42899938 NA +3307 chr4 + 190214555 67562070 67562069 67562130 61 AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAGAGAAAGAAAGAAAAGAAAAAGAAAGAAA chr4 - 94230402 20475871 20475870 20475931 73754472 73754471 73754532 61 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAA ...................:...:...x...:x..:....x.x.x.:...x.x:....:.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 47086199 NA +3151 chr4 + 190214555 67570694 67570693 67570809 116 AAGAAAGAAAGAAAGAGAAAGGAAGGAAGGAAGGAAGGGAGAAAGGAGGGAGGAAGAAAGGAGGGAGGGAGGAAGG---AAATAAAATGTTAAGCCAGGTATGGTGGCA--TATGCCTGTA chr4 - 94230402 32280614 32280613 32280729 61949674 61949673 61949789 116 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAAAGG----GCCATTTA-GGCGGCATTTATGTTTGTA ..:...:...:.:.:......:..:....x.xx.:.::..:x.....x....x.x........x:x:.x..x.::.---...x....x.----....xx..-..:....--....::.... 76M3I10M4D8M1D7M2I10M 78/111 70.3% 116/94230402 0.0% 10/111 9.0% 35290080 NA +3084 chr4 + 190214555 67571338 67571337 67571393 56 GGCAATTCCGAAGAAGATATTGACTCATGTTTTTTACTTTTCATTATTTTCTTTCT chr4 - 94230402 29043961 29043960 29044016 65186387 65186386 65186442 56 GGCAGGCTTGAAGAAGATATTTACTAAGGTTATTCATTTTTTATTATTATCTTTCT ....:x:::............x...x.x...x..:.:....:......x....... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 38527377 NA +3015 chr4 + 190214555 67577615 67577614 67577674 60 ATACATTCCAATTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGATGA chr4 - 94230402 41992575 41992574 41992634 52237769 52237768 52237828 60 ATACGTTTCAACTTAGTTAGCCTTTATTCTTTCCTTTTTCTTTTTTTTTTTTTGACATAA ....:..:...:..xx..xx::..:x.......:..:..:...............x..:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 25585040 NA +3719 chr4 + 190214555 67577724 67577723 67577806 83 CTGCAACCTCCACCTCCAGAGTTCAAGTGATTCTCCTGCTTCAGCCTCTCAAGTAGCTGGGATTACAGGCATGCACCATCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.x.:.........x...x.xx.x:.......:............:.:....--.:.......:::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 49380598 NA +3162 chr4 + 190214555 67588386 67588385 67588425 40 TTTTTTTTGTTGTTGTTGTTGTTTTTTGTTTTTGTTTTTT chr4 - 94230402 66916766 66916765 66916805 27313598 27313597 27313637 40 TTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTT .........................:.......xx..... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 671620 NA +3020 chr4 + 190214555 67657827 67657826 67657874 48 AAAAAAAAAAAAAAAAAGAAAACAAAAAACAAACAACCCCATCAAAAA chr4 - 94230402 31822900 31822899 31822947 62407456 62407455 62407503 48 AAAAGAAAAATAAAGGAGAAAACACAAAACAAAGAACCACAGCAAAAA ....:.....x...::........x........x....x..x...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 35834927 NA +3142 chr4 + 190214555 67657827 67657826 67657874 48 AAAAAAAAAAAAAAAAAGAAAACAAAAAACAAACAACCCCATCAAAAA chr4 - 94230402 31821411 31821410 31821458 62408945 62408944 62408992 48 AAAAATAAAAAAAAGGAGAAAACACAAAACAAAGAACCACAGCAAAAA .....x........::........x........x....x..x...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 35836416 NA +3417 chr4 + 190214555 67662344 67662343 67662472 129 ATAAAAGAATGTGGGATTTTTGCCAACAGGTAGCACAAAATGTTGTACTGATTTAAAGATGATTGGCTTATAAATACATTACTTCAAAATCACACTTATATCAGTATATAAATAAGTTTAGTTTTTTTT chr4 - 94230402 12797290 12797289 12797398 81433005 81433004 81433113 109 ATAATAGAAAATGGA--TTTTGCTAACTGGGAGAACA----GTAGTAATTATTC--------------CATAGACACATTATTTTAAAATCACATTTAGATAAATTCATAACTAGAATGATTTTTTTTT ....x....x:...:--......:...x..x..x...----..x...x.x...:--------------:...:.:......:..:.........:...x..x.:.x:....x..::x.x.x........ 15M2D20M4D13M14D61M 80/109 73.4% 109/94230402 0.0% 20/109 18.3% 54865054 NA +3284 chr4 + 190214555 67665309 67665308 67665440 132 TTAAAAAATCATTACACAGGGATAT----AGATATTTAAATTTCAACTCTTAT---------TGTCATAAGAGGTTAATTATCCCTAATTTACAAAATTAAAGAATTCCAGCATAGTGTTTTTTTTTGTTTGTTTGTTTTTTTTT chr4 - 94230402 78870532 78870531 78870667 15359736 15359735 15359871 136 TTAAAAAAATGTTCCAAAGCACTGTCATGATTTATTTAAATATAAATTCCTAAGTGCATGCATGTGACAAAGGATG---------TAATTCAGAAAACTAGATACATTCAGTGTTTTTTTTTTTGTTGTTTGTTTGTTTTTTTTT ........x::..x..x..x:x.:.----.xx.........x.x..:..:..x---------...x.:..::.:.x---------.....:.x....:..:.x.xx.:...::.xx.x......x.................... 25M4I24M9I14M9D60M 87/123 70.7% 136/94230402 0.0% 22/123 17.9% -11205223 -83025179 +3663 chr4 + 190214555 67683462 67683461 67683520 59 CAAGCTTGTCCAACCCACGGTCCACAGGCTGCATGCGGCCCAGGACAGCTTTGAATGCG chr4 - 94230402 10959672 10959671 10959730 83270673 83270672 83270731 59 CAAGCATGTCTAACTCACAGTCCACAGGCTGCATGCAACCTGGCACAGCTCACAGTGCG .....x....:...:...:.................::..::.x......:xx.:.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 56723790 NA +3210 chr4 + 190214555 67686956 67686955 67687071 116 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAAACAACCTACCGTTTTTACATAAAATCTTTAAGACTATGTTTTTTTTTTTTTTTTT------TTGAGACAGAGTCTCACTTT chr4 - 94230402 49357066 49357065 49357187 44873216 44873215 44873337 122 AAAAACCTGAAGAAGAAGAAAAAAAAGAAAAAACAACAAAGAAGAGCTAGGACTTCTTCATAAAATATAACAGTTTATAAATATCTTTTTGTTTTTACAAACTAAAAACATGTTCCCATTTT .....xxx:..:..:..:........:......x.x....:.x:.x...xx::..:.x........x.xxx..x:...:xx.x.:.....x.....------.x:.:...x:x..:..:... 96M6I20M 76/116 65.5% 122/94230402 0.0% 6/116 5.2% 18329890 NA +3291 chr4 + 190214555 67696380 67696379 67696444 65 TCTTTATATATATGTGTGTATATATAC--ACACACATATACATATATACACACATATATATACACAT chr4 - 94230402 4481687 4481686 4481753 89748650 89748649 89748716 67 TCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ....:.....x:.........:.::..--...:...:..x..:...:x.xx........:....... 27M2I38M 50/65 76.9% 67/94230402 0.0% 2/65 3.1% 63214693 NA +3797 chr4 + 190214555 67696402 67696401 67696527 126 TATACACACACATATACA-------TATATACACACATATATATACACATATACACA----TATATATACATATACATATATACAC--ATATATACACACACATATATATACACACATACATATATACATACACACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.....x....x.x..x-------::.:.:..::.....x:...............----:..:x:......:::...x:.....--:.....:::x::.......x....:.x..:.x.x.:.:....::.:.x:.. 18M7I32M4I25M2I51M 84/126 66.7% 139/94230402 0.0% 13/126 10.3% -5424673 -88805729 +3822 chr4 + 190214555 67696403 67696402 67696538 136 ATACACACACATATACATATATACACACATATATATACACATATACACATATATATACATATACATATATAC--ACATATATACACACACATATATATACACACATACATATATACA---------TACACACACACACACACACAC chr4 - 94230402 89016082 89016081 89016228 5214175 5214174 5214321 147 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCAC ..:::.......x.:...::.:......:.x.::::.....:..:..x..::...:..:..x.::.:.:.:.--...:x.:::.......:x..:::.:.x..::x:..:.:x.:..---------.:.x..:.:x.....x.x... 72M2I43M9I21M 82/136 60.3% 147/94230402 0.0% 11/136 8.1% -21319679 -72910723 +3164 chr4 + 190214555 67696427 67696426 67696490 64 ACACATATATATACACATATACACATATATATACATATACATATATACACATATATACACACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x.....x.........:..:.:x..::x::....x......::...:.:.:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 50175678 NA +3033 chr4 + 190214555 67696437 67696436 67696500 64 ATACACATATACACATATATATACATATACATATATACACATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.:.....x...:.x...:.....:.::.:x..:.x::....x.....::........... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 50175688 NA +3216 chr4 + 190214555 67696459 67696458 67696533 75 ACATATACATATATACACATATATACACACACATATATATACACACATACATATATACATACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::.:.::..:.:.:..:.x.:..::.:x:......:...:.x:....xx...:.:...:.........x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 59300671 NA +3349 chr4 + 190214555 67696463 67696462 67696548 86 ATACATATATACACATATATACACACACATATATATACACACATACATATATACATACACACACACACACACACACACACATATAA chr4 - 94230402 8395788 8395787 8395873 85834530 85834529 85834615 86 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ..:::.:...::::::...x...:::.:x..:....::.::.x.....xx.....:.............x.....x.::x...x.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 59300675 NA +3524 chr4 + 190214555 67696466 67696465 67696544 79 CATATATACACATATATACACACACATATATATACACACATACATATATACATACACACACACACACACACACACACAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.:.::.::.:.::.:.x...::...x..:.:.:::..:.x..:..xx...................x.....x.. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 59300679 NA +3475 chr4 + 190214555 67696469 67696468 67696548 80 ATATACACATATATACACACACATATATATACACACATACATATATACATACACACACACACACACACACACACATATAA chr4 - 94230402 8395788 8395787 8395867 85834536 85834535 85834615 80 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA ..:.::::..:.:.:..:.x....:...x....:.::..:::x..:.:xx.:.................x.....x..:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 59300681 NA +3072 chr4 + 190214555 67696476 67696475 67696532 57 CATATATACACACACATATATATACACACATACATATATACATACACACACACACAC chr4 - 94230402 80495438 80495437 80495494 13734909 13734908 13734965 57 CATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ............x...x....::.......:x..xxx:....x........:.x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -12798962 -81431440 +3532 chr4 + 190214555 67696476 67696475 67696544 69 CATATATACACACACATATATATACACACATACATATATACATACACACACACACACACACACACACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ....:.x.::..:...x..:....:.....::...:......x...:.:..x:..:...:...:.x... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 60100064 NA +3066 chr4 + 190214555 67696976 67696975 67697016 41 ATATATATTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTC chr4 - 94230402 71168431 71168430 71168471 23061932 23061931 23061972 41 ATCTAGGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTC ..x..x:................x................. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -3471455 -90758947 +3235 chr4 + 190214555 67696982 67696981 67697017 36 ATTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTCT chr4 - 94230402 64800067 64800066 64800102 29430301 29430300 29430336 36 ATTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCCT .................................:.. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 2896915 NA +3430 chr4 + 190214555 67697081 67697080 67697154 74 CTGCAACGTCCACCTCCTGGTTTCAGACGATTTTCATGCCTCAGCCTCCCAAGTGGCTGGGACTACAAGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.x:xx.x..:....x....:::.x..:x..x.x........::.....:.....:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 49499955 NA +3257 chr4 + 190214555 67698959 67698958 67698993 35 AAAAAACAAACAAACAAAACAAAACAAAAAAACCC chr4 - 94230402 25002888 25002887 25002922 69227481 69227480 69227515 35 AAAAAACAAACAAACAAAACAAAACAAAAAAACCC ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 42696071 NA +3024 chr4 + 190214555 67733929 67733928 67733970 42 AAAAAACAAAACAAAACAACAACAAAAAAACAGACTTCAGTT chr4 - 94230402 80081940 80081939 80081981 14148422 14148421 14148463 42 AAAAAACAAAACAAAACAACAACAACAAAAAAGAGCCCAGTT .........................x....x...x::..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -12348011 -81882391 +3174 chr4 + 190214555 67749597 67749596 67749674 78 TTTTCTTTTCC----------TCCTTCCCTCCTTCGTT-------------TTTCTTTTCTACCTTTCCTCCTTTTTCCTCCCCTTCCCTCCTTTCCCTCC chr4 - 94230402 200588 200587 200688 94029715 94029714 94029815 101 TTTTCTCTTCCAGGCACTGAGCTCATCCCTCTTTCATTACACGGTTTGTTTTTCCTTTTTTTCCCTTCTTCTTTATTTCCCCCCCCCCCTCTTTTCACTCC ......:....----------::.x......:...:..-------------..:.....:.x..:...:..:..x..:.:....::.....:....x.... 11M10I17M13I50M 59/78 75.6% 101/94230402 0.0% 23/78 29.5% 67549009 NA +3249 chr4 + 190214555 67766674 67766673 67766725 52 CACACACACACACACACACACACACACATATATATACTTATTATTTTCATCT chr4 - 94230402 43966806 43966805 43966857 50263546 50263545 50263597 52 CATACACACACAAACGCACACATATACAAATACGTACTTATTATGCCCATCT ..:.........x..:......:.:...x...::..........x::..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 23799868 NA +3300 chr4 + 190214555 67771451 67771450 67771511 61 AAAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAA-AAACAAAAGAAAA chr4 - 94230402 14334317 14334316 14334376 79896027 79896026 79896086 60 AAAAGCCAAAAAAAAA--AAAAAAAAAACCAACCAACCAACCAAACAACAAACACTAGGAAA ....:.x...x.....--......................x.......-.....xx..:... 16M2D30M1I13M 52/59 88.1% 60/94230402 0.0% 3/59 5.1% 53437134 NA +3393 chr4 + 190214555 67771452 67771451 67771508 57 AAAACAAAACAAAAACAAAAAAAAAAACCAACCAACCAAACAAACAAAAACAAAAGA chr4 - 94230402 90957681 90957680 90957737 3272666 3272665 3272722 57 AAAAAAAAAAAAAAAAACCAAAAAAAACCAACCAACCAAACCCACAACAACAGAGGA ....x....x.....x.xx......................xx....x....:.:.. 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% -23186229 -71044173 +3236 chr4 + 190214555 67771463 67771462 67771508 46 AAAACAAAAAAAAA--AACCAACCAACCAAACAAACAAAAACAAAAGA chr4 - 94230402 63063423 63063422 63063470 31166933 31166932 31166980 48 AAGGCAAAAAAAAACCAACCAACCAACCAAACAAACAAAAAAAAAAAA ..::..........--.........................x....:. 14M2I32M 42/46 91.3% 48/94230402 0.0% 2/46 4.3% 4708040 NA +3246 chr4 + 190214555 67771467 67771466 67771520 54 CAAAAAAAAAAACCAACCAACCAAACAAACAAAAACAAAAGAAAACAAAATGAA chr4 - 94230402 88019370 88019369 88019423 6210980 6210979 6211033 54 CAGAAAGAAAAAGAAAACAAGCAAACAAACAAAAACTAGGGAAAACAAACTGAA ..:...:.....xx..x...x...............x.::.........x.... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% -20247903 -73982499 +3157 chr4 + 190214555 67771470 67771469 67771511 42 AAAAAAAAACCAACCAACCAAACAAACAAAAACAAAAGAAAA chr4 - 94230402 63063428 63063427 63063469 31166934 31166933 31166975 42 AAAAAAAAACCAACCAACCAACCAAACAAACAAAAAAAAAAA .....................x........x.x....:.... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 4708042 NA +3040 chr4 + 190214555 67771472 67771471 67771515 44 AAAAAAACCAACCAACCAAACAAACAAAAACAAAAGAAAACAAA chr4 - 94230402 36243906 36243905 36243949 57986454 57986453 57986497 44 AAAAAAACCAACCAACCAAACAAAAAAAAAAAAAACCCAACAAA ........................x.....x....xxx...... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 31527566 NA +3366 chr4 + 190214555 67796049 67796048 67796149 101 TATTTACTTATCAATCATCTATCTGTGTGTGTATGTGTATATGTATATATGTGTGTGTATGTGTGTGCGTGTGTAAATAGC--AGGCATACCTAACTTTTCAG chr4 - 94230402 70982604 70982603 70982706 23247697 23247696 23247799 103 TATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTGGATTGTTCAG ......:.:..xx.x.x.:.x..:x.......:...:.:.:....:......x::.:x..........:.::::.x..:.:--..x...x::x:.:.x..... 81M2I20M 65/101 64.4% 103/94230402 0.0% 2/101 2.0% -3186555 -91043847 +3032 chr4 + 190214555 67826901 67826900 67826958 58 AGAAAGTCTT-TGTCTCTAAAAAACAAGCAAACAAACAAACAAACAAAATCTTTTTTAT chr4 - 94230402 87068623 87068622 87068681 7161722 7161721 7161780 59 AAACGGTCTTATTTTTCCAAAAGAAAAACAAACAAACAAACAAAAAAAAACTCTTTTAT .:.x:.....-.x.:..:....:.x..:................x....x..:...... 10M1I48M 46/58 79.3% 59/94230402 0.0% 1/58 1.7% -19241722 -74988680 +4352 chr4 + 190214555 67833196 67833195 67833340 145 GGCCTCACCTTCTGAAGCAGTGAGCTGCTGTCAGGATCCACATGTTATTGATCAGGCTGCCTCCACAGTGGTG-----GGCATTATTGAGCC----GCAGACTGACTTGCCACGGCCAGCTTCCCTCCTCAGCCTCAGTGCCTCCAAGGATTCT chr4 - 94230402 31005611 31005610 31005764 63224639 63224638 63224792 154 GGACTCACCTCATGAAACAGTGGGCAGCTGTAAGGATCCACTGGTTACTGATGATAGAGCCTCCACAGAGGTGTCTCTGGCGAGATAGCTTCACATGTAAGCTCACTTGCCAAGGCCATTCACCAGGGGAAGAGTCCGTCCCTCCAATTATCCT ..x.......:x....:.....:..x.....x.........xx....:....x.x:xx..........x....-----...:xx..x.xx:.----.:.::..x........x.....x::x..xxxxxx..xx..x..x.......xx..:.. 73M5I14M4I58M 100/145 69.0% 154/94230402 0.0% 9/145 6.2% 36827585 NA +3112 chr4 + 190214555 67857260 67857259 67857347 88 AAGAAAATATGGTATATATATATA-------------TATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 14964783 14964782 14964883 79265520 79265519 79265620 101 AAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ..:..:::.x:..::..x......-------------:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............ 24M13I64M 58/88 65.9% 101/94230402 0.0% 13/88 14.8% 52892477 NA +3916 chr4 + 190214555 67857260 67857259 67857347 88 AAGAAAAT-----ATGGTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395770 8395769 8395862 85834541 85834540 85834633 93 AAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ........-----.x.x:..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 8M5I80M 64/88 72.7% 93/94230402 0.0% 5/88 5.7% 59461490 NA +3020 chr4 + 190214555 67857264 67857263 67857342 79 AAATATGGTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACAC chr4 - 94230402 14964806 14964805 14964884 79265519 79265518 79265597 79 AGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.x:..x.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.:.....::............. 79M 49/79 62.0% 79/94230402 0.0% 0/79 0.0% 52892458 NA +3228 chr4 + 190214555 67857265 67857264 67857333 69 AATATGGTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACA chr4 - 94230402 37363035 37363034 37363103 56867300 56867299 56867368 69 AACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ..:..x..:..:...:x.:......:..::.:.x......xx:.:.....:.:...:..:x........ 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 30494230 NA +3071 chr4 + 190214555 67857271 67857270 67857331 61 GTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACA chr4 - 94230402 37363043 37363042 37363103 56867300 56867299 56867360 61 GTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ...:...:x.:......:..::.:.x......xx:.:.....:.:...:...x........ 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 30494228 NA +3676 chr4 + 190214555 67857271 67857270 67857354 84 GTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATACACAA chr4 - 94230402 8395792 8395791 8395875 85834528 85834527 85834611 84 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.::x...x.x.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 59461479 NA +3759 chr4 + 190214555 67857271 67857270 67857354 84 GTATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATACACAA chr4 - 94230402 8395790 8395789 8395873 85834530 85834529 85834613 84 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ..:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x.....x.::x.:.x.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 59461481 NA +4004 chr4 + 190214555 67857272 67857271 67857354 83 TATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATACACAA chr4 - 94230402 8395789 8395788 8395871 85834532 85834531 85834614 83 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA .:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x.....x..:x.:.. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 59461483 NA +3068 chr4 + 190214555 67857274 67857273 67857344 71 TATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 52892460 NA +4155 chr4 + 190214555 67857279 67857278 67857361 83 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATACACAATGGAATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.::...x.:..:...x..:....:...::x....:xx.:.................x......xx..... 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% 59461491 NA +3098 chr4 + 190214555 67857288 67857287 67857349 62 TATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATA chr4 - 94230402 88147180 88147179 88147238 6083165 6083164 6083223 59 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATATA ..:..:..x:x..............:.x.:.:...:.:.............---..:.:... 51M3D8M 46/59 78.0% 59/94230402 0.0% 3/59 5.1% -20289892 -73940510 +3457 chr4 + 190214555 67920549 67920548 67920615 67 ATTTTTTTTTATATATACACACACACATATATGCATATATATACACACATATATATGTATGCATATA chr4 - 94230402 38535883 38535882 38535949 55694454 55694453 55694520 67 ATTTTCTCAACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA .....:.:xxxx.....:......::.:..:x.x...:.:..........:.:............:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 29384666 NA +3136 chr4 + 190214555 67920559 67920558 67920622 64 ATATATACACACACACATATATGCATATATATACACACATATATATGTATGCATATATATGTGT chr4 - 94230402 71630142 71630141 71630205 22600198 22600197 22600261 64 ATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::...:.........x....:.....x.x.::.::...:.:.x..:...::x....:..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% -3709583 -90520819 +3104 chr4 + 190214555 67920575 67920574 67920633 59 ATATATGCATATATATACACACATATATATGTATGCATATATATGTGTGTGCATATATA chr4 - 94230402 17853474 17853473 17853532 76376871 76376870 76376929 59 ATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTA ....:::.....:........x:..xx.x..........:..:.:.x.x.......:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 50067101 NA +3043 chr4 + 190214555 67961431 67961430 67961524 94 CATTTCCTTTCTTTTTCCTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 51354242 51354241 51354335 42876068 42876067 42876161 94 CAGTTCCTTTCATCATTCTTCCCTCTCTCATCAGATTTTTTTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTT ..x........x.:x.:...:.:.:...:x..xxx::...::..:xx..:.x.xx:xx......x..x..x..x...:......:......... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 16607189 NA +3050 chr4 + 190214555 67961441 67961440 67961504 64 CTTTTTCCTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 83441844 83441843 83441907 10788496 10788495 10788559 64 CTCTTTTTCTTCTCTGATCTTCCCTCCCTCCCTTTTCTGTTCCTTTCTATTTCTTCTGCTCTTT ..:...:::....:.xx.:...::...:.:........x.......:.x...:..:.x:.:... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% -15480403 -78749999 +3142 chr4 + 190214555 67961448 67961447 67961551 104 CTTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGTTCTGTTG chr4 - 94230402 9693767 9693766 9693855 84536548 84536547 84536636 89 CTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT---------------GACAAGGCCTCATTCAGCTG ...::.::...::::..:.....::.:...x:.....x.....x..x.......:...:::...:::..---------------....::.:..::...x.:.. 69M15D20M 58/89 65.2% 89/94230402 0.0% 15/89 16.9% 58267681 NA +3045 chr4 + 190214555 67961449 67961448 67961522 74 TTTCTTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 27426810 27426809 27426883 66803520 66803519 66803593 74 TTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ...x.x.:..x....:.....x...x:.x:::::.:.....:..:..:.........:...:.:.x:...x.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 40534639 NA +3005 chr4 + 190214555 67961453 67961452 67961527 75 TTTTCTTTTCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 27426809 27426808 27426883 66803520 66803519 66803594 75 TTTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ....x.x.:..x.:..:.....x:..x:.x.:::.::.....:..:..:.........:...:.:.x:...x.:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 40534644 NA +3275 chr4 + 190214555 67961461 67961460 67961550 90 TCTTTCCTTTCCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGTTCTGTT chr4 - 94230402 56101365 56101364 56101451 38128952 38128951 38129038 87 TTTTGCCATTCCTTATTTT---CTTTTTCTTTATTTTTTCTTTCTGTTTTTATTGCCTTTTCTAGTTGCAAAACATGATCTTATTGTGTT .:..x..x......x.:..---......:...x......:...:.x.....x..x::....:.xx..x::.:...x::....:..x.... 19M3D68M 61/87 70.1% 87/94230402 0.0% 3/87 3.4% 11860096 NA +3235 chr4 + 190214555 67961491 67961490 67961550 60 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGTTCTGTT chr4 - 94230402 76182412 76182411 76182471 18047932 18047931 18047991 60 TTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT .......x.:x.:..:xx........x............:...x.:..xx.......... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% -8220921 -86009481 +3321 chr4 + 190214555 67979145 67979144 67979217 73 CTGCAACCTCTGCCTCCCAGGTTAAAGTGATTTTCCTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.::....x.....x..:x.xx.x........::.:...........:....x..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 49782019 NA +3114 chr4 + 190214555 67979783 67979782 67979843 61 TATTCTGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA chr4 - 94230402 81428420 81428419 81428480 12801923 12801922 12801983 61 TATTTTAGTTTTTTGTGTGTGTGTGTGTGTATGGTCATGTATACGTACAATTGTGTTTGGA ....:.:.....x.................:..xx::...:.::..:::xx.....x.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% -13448637 -80781765 +3079 chr4 + 190214555 68023473 68023472 68023529 57 CTGGGCAACACAGGGAGACCCCGTCTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAT chr4 - 94230402 36313569 36313568 36313625 57916778 57916777 57916834 57 CTTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAAGCAAT ..x....:..:...:...x.x:x...xx............:...........:x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 31709904 NA +3027 chr4 + 190214555 68040274 68040273 68040365 92 TGGAGGGTTTTTTTGTTGGTTTGTTTGTTTGGTTTTGTGTTTTTTTTTGAGACGGGGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCA chr4 - 94230402 67992467 67992466 67992558 26237845 26237844 26237936 92 TGGTTGGTTGGTTGGTTGTTTTGTTTGCTTGGTTTTGGTTTTCTGTTTTAAACTTGGATCTGTTCACTGCTTCAGATTAAAGAGCAGCCGCA ...xx....xx..x....x........:.........xx...:.x...x.:..xx..x::..:..xx.xx::...::.::..x....:x... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 47807 NA +4610 chr4 + 190214555 68053918 68053917 68054070 153 AGTCTTTGAGGCAATCCAATCTCGATACTTAGTTACTCTGGTGTAGACTCCAGGTTTTTTGGGAAGTGCACATGATTGTCCCCAACTTACTATACCTACAATGTACCAGATGTCATGATTATCATAAACCAGAGGTCCACCAGAATCTCCCTG chr4 - 94230402 30999175 30999174 30999327 63231076 63231075 63231228 153 AGTTTTTTCCAAAATCCAGTCTGAAAATTCAACAACTTTTGTGTAGACTCCTGGCTGCTGGGGCCGAGCACAGCCTTCACCCCAACTAGTGATGCCCACCAGATACCACACTTCCTCGTGCCTGCATGACAGTGGTCCTCCAGAATCTCCCTG ...:...xxx:x......:...x:.x.:.:.::x...:.x...........x..:.x:.x...xx.x.....xxx..xx........x::x..:..:..x.x:.....x.:x..x.x:.xx::::.x:x...x.....x.............. 153M 97/153 63.4% 153/94230402 0.0% 0/153 0.0% 37054743 NA +3109 chr4 + 190214555 68134638 68134637 68134743 106 CAGGAACTTTACAGGCCAGGAGAGAATGGGATGATATGTTGAAAGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCCTGCCACCCAAA chr4 - 94230402 53403724 53403723 53403829 40826574 40826573 40826679 106 CATGGAATGTAAGGACCCGGGGGCATTAGTGTGCACTGCTGAGTACGTTAAGAAGAAAAAAAAAAAAAAAAAAGCAAGCAAGATTAAAATAGACCTGCAGCTGAAA ..x.:.x.x..x:.:..x..:.:x.x.:.x:..xxx..:...:x::.....:..:..................:x..:x..:.xx....xx:x.....x:.:x... 106M 66/106 62.3% 106/94230402 0.0% 0/106 0.0% 14730914 NA +3668 chr4 + 190214555 68138460 68138459 68138541 82 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGTCTTTCCAGTAGCTGGGATTACAGGTGGGCGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..:xx:x..:.............x...x.xx.x.....:.....x.........:.:....x...-----...... 71M5D6M 59/77 76.6% 77/94230402 0.0% 5/77 6.5% 49941334 NA +3148 chr4 + 190214555 68185664 68185663 68185743 80 AAATTATAATTTGAAATATGTTTCTAATGTTGCCTGTCTCTCTTTATCTCTCTTCCTACATCTTTGGACTAGAGCTTTCT chr4 - 94230402 3578132 3578131 3578209 90652194 90652193 90652271 78 AGACTATAATACTAAACATCGGTTTAAAGTAGGCTGTTTCTCTCTTTCTCTCTTCATACATATTTGGA--AGATTTTTTT .:.:......x:x...:..xxx.:...x..x.x....:.....:.x.........x.....x......--...x:...:. 68M2D10M 57/78 73.1% 78/94230402 0.0% 2/78 2.6% 64607532 NA +3380 chr4 + 190214555 68227485 68227484 68227558 74 CCACAGCCTCAACCTGCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCTGAATAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:......:x..x..x.....:.....::x.:.x.xx:x........::::.:.......:....:.x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 50030359 NA +3212 chr4 + 190214555 68254944 68254943 68255009 66 TCCAGCCTGGG--TGAGACCCTGTCTCAAAAAAAGAAAAAACAAAGCAAAACAACAACAACAACAAAA chr4 - 94230402 59458469 59458468 59458535 34771868 34771867 34771934 67 TCCAACCCTGGAAGGAAACCTTATTCTAGAAGAAAACAAAACAAA-CAAAACAACAACAACAACAAAA ....:..:x..--x..:...:.:.:::.:..:..:.x........-...................... 11M2I32M1D22M 51/65 78.5% 67/94230402 0.0% 3/65 4.6% 8796475 NA +3356 chr4 + 190214555 68275064 68275063 68275153 90 ATTTTACAAATATCACAGTTTGGAAACAATTTCTCTCTTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTTTGAG---ACAGGGTCTTGTTTT chr4 - 94230402 28058631 28058630 28058723 66171680 66171679 66171772 93 ATTCTTTTATTAGTGCATTATGGACAAAATTACTGCCTTATAGATTTCTCTCTCTTTTTTTTTTTTTTTTTTAAGCAAATAATGTCTTTTTTT ...:.x:x.x..x::..x.x....x.x....x..x:...x.xxx.:..........................:..---.:.:x.....x.... 75M3I15M 65/90 72.2% 93/94230402 0.0% 3/90 3.3% 40216433 NA +3095 chr4 + 190214555 68275101 68275100 68275136 36 TTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTTTG chr4 - 94230402 18929913 18929912 18929948 75300455 75300454 75300490 36 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ..:...:............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 49345188 NA +8232 chr4 + 190214555 68302264 68302263 68302462 199 TATTCACATGACAATTTTA--TTTCTTTTGCCTTTCCCCCCCCTTCAGGAAAATGCACTACAATTATCTGAGATAATGGGAAAAGCTGAAATGTGGCTCATTCGAAACTACTGGTATTTGGAATTTCCTCGCCCACTCTTACCTAATTTTGAATTTGTTGTAAGACTCTACTGCAAACCTGTCAACCCCCTGCCTAAGGTA chr4 - 94230402 40937947 40937946 40938140 53292263 53292262 53292456 194 TATACACGTGATTGTTGTAAATGCCTTGTACTTTGCCCAC------AGGAAGGCCCACAACA-CTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTA ...x...:...:x:..x..--.x:...x.:.:..x...x.------.....:::x...x...-:.:.x.....::...........x..:..:.....x..:x...xx......x....x..............x:..:.:..:..:.....:.......x.:....::.....x.:....:x..x..x.....x...... 19M2I19M6D16M1D138M 141/192 73.4% 194/94230402 0.0% 9/192 4.7% 27364317 NA +3217 chr4 + 190214555 68303596 68303595 68303699 104 AGTGAGCTGTAATCATGCCACTGTATCCTAGCCTGGGCAACG-GATGGAGACCTTGTCTTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 4027157 4027156 4027261 90203142 90203141 90203246 105 AGGAAGCTATAACAATGACAAAATTCCCTCTACTGTACTATGTGAAGCTGATAATGTCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA ..x:....:...:x...x..xx:.x:...xxx...x:.x.:.-..x.xx..:xx..........x..............xx...x..x..x..x..x........ 42M1I62M 72/104 69.2% 105/94230402 0.0% 1/104 1.0% 64276439 NA +45255 chr4 + 190214555 68313325 68313324 68314346 1022 TCAATCTTTACCAATTTATTTT-ATACAAAACA-------GTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTGGAGGGGAAGGCTAAACAATAGCATCAACCA---CGCTACTGAACATAGGAA----TTTTTCATTTAAAAAGATTAAAAATTAGATAGCAAT---GTCTTCTTAATATTGCTCTCGTCATTGAAGACTGAGGAAAAATAAAAAGTGACTTTATAAGTTTTTTAAAAAAAGAGGCAATGGGGAAAAAAACAAGAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGCAAAATATCA-TGGCAGTTATCAATCAAGATCCAAAAAGGAAAAAAACAAACAAAAAAATAACTCTAGGATGAACACACTA----TAAGAACATTTATGGAGAAAGAATCAGTATCTACATTCTTGGACTGTT--CCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGG-------ATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATGATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGAAAAT-AAATTTACTACTTGTAAACACACACAAAAAAAAAATACAAGAT-TTTTTGTATCTTTAAACAATCAGTGCTTCCAAAAGCCCATTATCTTCTATATCGACCTCTCTCCCCTCGGTCTCTGTCTCGATCACATAATCGCTCTCTTTCTCTTTCTCTATCACGTCCTCTATCTCGCTCTCTGTCTCGTCTGTTATCTCTAGGGCGGTCTCGCTCTCGTTCCCGGTCTCTTTCACGGGGTCTACTTCTCCGGCCACTGACAACAGCTTGTGTGCGACGAAGGAAATCATCCACCCTCATATCATAATCATGCTAGAAAAGGAAAGAAATGTGTT chr4 - 94230402 40946873 40946872 40947862 53282541 53282540 53283530 990 TCAACAGTTACCGatttatttttatataaaaaaaGAAATGGTAGCAATGTAGAATACAGCAATA--CTTCCTGTTCCACACACGCAGGTTGTGAACATTCCAAGC-AATGTGTACATTTTGGAAGG--AGACTAGACAAGATAATTGACCAAAATGTTACTGAACACGGGAAGATTTATTTTTTTAAAAAAGGTTAAAAATTAGGTATCAATATTGTCTTTTTAATATTGCTTTCATTACTGAAGACTGA-----AAGAACACTTGACTTTACAGACAGTTAAAAAACAA---------GAAGAAAAGAAGAAAGCTGCTATGGCACCGCCATTCAGTCAAAA-ATCATACTT-AATATTTGCATACTTGATAGCAGCATTCTCCCCACAGAACCATGTGAAACTACAGGAAGAAA-ACATCAAAGCAAAAAAAAAATGGCAGTTTTCCATCAGTATTCAAAAA-------------------------CCTAGAATGAAGTTACTAAGTAGATGAACACTCACTGAGTATTAATCAATATGTACATTCTTG-ACTGTTTCCCATTCTGCTCCAATAGAATTGTCAAGT-----GTCAGCTTTGTGTACTCTATTTTTGGCCAAACTGAGTTTTTCCAGTTCACAGTTCACTGCATGCTTGGAATAAAGAGGGTCATTATAAATCCTTCTACACAACGAACTT--TAAGTAGACAGCTGAAAAGAAAATGTACTACTTGTAAACACAC-----AAAAAAATACAAGCTCTTTTTGT---TTCAAGTGAGCACTGGTTCTAGA--CAGATTATCTtcggtatctacctctttctcctctgtctctgtcccggtcacaaatcctctctctctccctttccctgtcacggcctctgtcacgttctctgtctcttctattatctctaggccggtcccgttcccgctctcgatccctctctcGAGGCCTGCTTCTCCGACCGCTGACAACTGCTTGTGTGCGGCGAAGAAAGTCGTCTACCCTCATGTCATAGTCGTGCT-GTGAGGGAAGGACAGCTGTT ....:xx.....:.........-...:....x.-------................::.x...x--.....xx.x....:......:..................-.....:....x......:..--..:...:....x.xx..::....---:.:.........::....----.x...:x..x......:...........:..x....---.....:...........:..:.:.:..........-----..x..x.xx........:.:::xx..x.....x.:---------.:.:....:x.::.:.......:::...:.....x........x-.........-..............:............x.::::..x.....:....x.......x.x.....-..............x.xx.-........x..x....:x..:......-------------------------:....:.....xx:....----x.x.....:.:.:x...x.xx.....:...x..........-......--.........:......:..x......x.-----.......x..x-------.........x:.x:................x:.xxx:...............:....:.......x..................:......--..:.:.............x-....x..................-----.............x.-.......---..:..:::.x..x..x...:.:.--.xx.........x:....x......:..:....x.........:..:.....x.x:.x......:..:.....:..:.....x.....:..x..:..........x...:...........x.....:..:..:..:..:..:..:..:..x..:..:..:........:..:........x...........:.....:..:..:..:........:.....:..:....-.x:.:....:..x.xx.... 22M1I10M7I24M2D39M1D20M2D23M3I18M4I36M3I35M5D35M9D44M1D9M1D62M1D19M1I27M25D18M4I41M1D6M2I28M5D11M7I91M2D19M1I23M5D15M1I7M3D23M2D231M1D20M 765/956 80.0% 990/94230402 0.0% 100/956 10.5% 27366452 NA +11857 chr4 + 190214555 68316291 68316290 68316470 180 CCTTTGCCTCCTTGTGCACTTACTACTCGTTTATCTCTGTATCTTGCTTCATGTGGTACTGGATGATGTCCTGAGTAAGGGGGATGAGCTTGAGGAGGTGGAGCATGGTGCTGATAGTAAGGATGGTGTGGAGGTTGTTCCATTCCTGGGTAAGGGGGCTAAA--------AAAGGAAAACCATTTAC chr4 - 94230402 40948556 40948555 40948743 53281660 53281659 53281847 188 CCCTTGTCTTTTTGGACACTTACTACTCGTTTGTCTCTATATCTTGCTTCATGTGGTACAGGATGATGTCCTGAGTATGGAGGGTGAGCTTGAGGTGGAGGTGCATGGTGCTGATAGTAAGGATGGTGTGGTGGCTGCTCCATACCTGGATACGGTGGCTACAAGAAAGTTAAAGGCAGTCTGTTTAC ..:...:..::...x:................:.....:....................x.................x..:..:...........x..x..x.............................x..:..:.....x.....:..x..x.....x.--------.....x.:x.::..... 163M8I17M 152/180 84.4% 188/94230402 0.0% 8/180 4.4% 27367735 NA +16573 chr4 + 190214555 68318500 68318499 68318880 381 AAAATAGAATAA--TACAAACCATTCCTTGCCAAGGTGGTGGTGGTCCCATGTTATGAAATTCCCTCACATAATCATTGTAGGACTAAAATAAAAGATGATAATGTCAATATAATTAAAAATTATCACAGAA---CTGCAAAATAAATCAGAGCCTGATTTTA--------TCCACATTAAATAGATAAAATGAAATGCTTACCCCATTTAAAAACACATCTCGGCGAACTCCTGAAAATCGTCTGTTGGGAAT-AAGATTTGTGAAACTAAATTCAGGTAATTCATA--AACTAGTTCCAAGAATGTAATTCAAAACTAGGCAAGAGTGAACCCGACTTACCTGTCCACTTCCTGGTATCGTGGATCCTTTAAATACCCTGTTCAAACATCAAGCA chr4 - 94230402 40950216 40950215 40950590 53279813 53279812 53280187 375 AAAGTTGAACAAGACACAAACCATTCCTTGCCATGGTGGCGGTGGTCCCATGTTGTGGAATTCCCTCACGTAATCATTGTAGGACTAAAATGAAAGACAGGGATATTAATAT---------TTGTGACAGGAGTTCTTCAGAAGTGCTGAAAGCTGAATATAAGAAGGTCCCCCAAAATGAGCATGCACAA------ACTTACCCCATTTAAAAACACATCTCGTCGAACTCCTGAAAATCGTCTGTTGGGAATAAAAATTTGCAGAACTAAATTCACATTATCCATACGGATAAGTTACCAGGA-------CATAAAAAGAACAGCATGAACACACCTTACCTGTCGACTTCAGGATACCTGGGATCCTTTATATACCCTGTTCAAACATCAAGCA ...:.x...:..--:..................x.....:..............:..:...........:.....................:.....:::x:..:.:.....---------..:.x....:.---..x..:..xx:x.x.:...:x:..x.x.--------:...x.x.:.::.x::.x..------:..........................x.............................-..:.....:::...........x:.x..:....--:.:x....x.x..:.-------..x..xx..:xx..x:.....x.:x..........x.....xx.:..:.xx..........x....................... 12M2I98M9D11M3I28M8I20M6D57M1I33M2I15M7D85M 281/359 78.3% 375/94230402 0.0% 38/359 10.6% 27368284 NA +109168 chr4 + 190214555 68320111 68320110 68322998 2888 TAAAATATTAACCTGGTCTCTGGTGAAACTCAGGGGGATAGTCAATCCTTGGTTTCTTTCTGCTGTTATGAATATCATAATCTTCTGGTCGACGCCTACACAAATTAGACACATTAGAAATTAAACCAAAAACTGCTGGGAGAACAAAGAGTAAAGCAAGAGTTTCTGACAGAGATA------AGTACAAAGAATAACCCATTATTTAACA--TCTTAATTTTTTTAGTGAGCAAATTATTTTAAAATTCCTACATTT-TGATTCTCAAATTAATTCCT-----ATAAACCAAACTTTAAATGTACTGCTGGAAGTAGATATTCTCTGCCAACTCATGCTATGATGAGAAAATTGCAGACTAGTCCAATCAAAACATGTA---AGTCACATTTTAGTAGTCTAAACAAAAGTAAACAAAGTCATTCTCAAACTAAATATCAGTTTTAACAATTAAAACACTTTCCCAAATAAAGTCT---CCATTCAGATGAAAAATAAAAACTAGAAAAACCTATCATC-------------ATTGTACAATATGTAACTCTAAAATCTGCATATTTAAAACTTATAAATGTCATTTTA--------------GGTTAAGTCTAAACAAAATTAAGAATTTATTTTTCCTCTGCTTTGCACAAA------------TTATGAA--------TTTTACA------TGATCATACAGAAAATTTGATAC--TTATTAA-------------AAGCAACTTTACAGGAAAGTTTTTAAAATCTTAATAGTTAAAAAACT----ATTTCTTAATAATCCTTAGTAACAT--TTAGTTTTTCTTTCTACATCTAATGACATTTAAGAATTAAGGGAATT------------TTTTTTTTCCAGAGACAATGCCTTGTAATAAAATAGGCTTTTATAAATTGGCAAGTAATGGGTCAGAATTTTAACAGAGTTCATAAAACTAATTCAAAATATATTCTTTAGAAGGT-----------------GAAACTTTACTGACTACAGAGGGCTGTTCTTTACTGTCTTCCATAAATCGGGTTAACTTAACACATCATTAAATACACTTCAATTTACTTAGCAGCTAATAAAGAGTTAAACAAAAAAAAAGTCCAAAATATTTAGAAAATAAATATATCTTTTTAAC-CTTAATGTCAAATAAAAACTTGATAACAACCTAGCATTCACTAGTTTTCAGCTATTTGTCTGAGTACCAACTGCTTTCATTAACTTTTTCAAC----------ACAGTTCACT----CAAACTGCAAAGTTAAGTGCAATAATCCCAAGCCCCCCAACAG-------------AATAAAAACAGTTGCATCTACAATAAA-TAATACTAAGAAAATTAAAAGCTGGTTTAAAAAATAAACATACCGCTTTCCTGTAGTTTGGGGAGTGCATTTACGACCGGTATAAAACATGATAGTAACAGTTCATATAGTAGTCCAACTACTGACTTTAAGCTGTAAGCCACATACATAAATGGAGGCCCTGGCAGGCTTGAGAGAAGGTGTAGTGGTGTAATAAGTATAGTTTGCAGTCCATTGCAAAACTGAGGTAAAAACTTCACTTGTATATATTGTATTGCACTGGAAACCTCTTAGCTTAAAACTTCAAAAGACATCTTGGTGCTCAGTCCTTTTAGGCCAAAAATAAGGGG-CTCTGCCAGGTTTCCTCCTACCTACTCGACAGTGTCCTTTTT-----------------AAGCTCAAAGAAATGGGGACTCTTGTTGGATTATCTGTACCTACCACAGGATGTCTCCACCAAAAGGAAATTTAATCAAAGGTTTCATCCCATCAACCATACATCCAATAGTCTTTAGCAGAATATTTTAGATTTAGCTGTATGCAAAT---CTACACAGGGGAA-GGTGTTGGGTAGAAGGGCTTAAATCAGTCCTTTGCAAAGACTTCTCCAATTCTGTAACAAGTTAAACCCCCTTTTT--CTGGAAAATGCTGTTTAGTTCATAAAGTAGTGATCAATAACCATGGCGATCCTCTAAAAAACACTTTTAAGTCCACAGGTACTGCCAGCATCTGGAAAAGTTGTAAA--CAGACACAGCAACAGCCCTTCTTTTTGGTTTGTTGCCGGGTCTCCCAGGGCCACTTGATCCCCTTTGGAAAGAACCTATTGTTTTCAGAAGCTCAGCAAGATGTGTGAATTCACTGGGTACATGTTAGAGAATATTTGGCAATAGGGTTAACACATCACGGTGATAAAATCTGAAACAGTCCCAATAATGCTCCTC---TTGAATATCAAAATAACTTAAAATATTTTATCCTCTAAATGAGGCGTCATCTTCTGAAAAAATATTAGTGATCCTTTATAAAAGTCCCATATCTGATAAGGCTTATCCAGAGACATACCTGAAAGAAAAGGCTTTTTAAAAAGTATTAACA-ATTTTTG-CAAATAAAGACTTCCTCCTCTTCCTCCTTTCTAGCCTGTTCTTAGCAA---CAAATGCCTACCTCATTTCAATTGTATACATTGTATTATCAGAGTA--TTATCTAATCTAAACTGGTTATCACT------GGTTATACTTTTTT----CTGCATAAGGAAAGATCCCCATTTTCCTCTTGAAAAATGACTGAGACCAAG-------GTGACCATGTGAAATCCTCAATGAAGCCACAAACTAGTCCATGCAGCTTGATTTGAGGATTTTCTCTTTCTTCTTTACCGCAGGACAAACTTTTGACGAATCATATTCCTCCATCATGTTATTCTGATACATGTGCCTATTATCAGTCCAAAGAACGTTTCTAACCTTCCCACATCCCGGACTGGTTCTCGACGGGATGGACGTCCTCGTGATCGGGGCTGAGAATGCATTCTTCTCTTGTGACGCATTTTATGAATGACCTGATACAAGTCAATACTTTCATCGGGGGGAAACAGAAGACAAAGCTGGGTTCCACATTCAAGTTCAATTTCCTAGAAT--------AGGAAAGTAGCAATTTATAAAACAAAAACAGACCCTTTCAACAGACTTGCATTTTCCTGATGTA-CCAGAACAAAAA chr4 - 94230402 40952063 40952062 40954967 53275436 53275435 53278340 2905 TAAGATATTAACCTGGTCTTTGGTGAAACTCAGGGGGATAGTCAATCCTTGGTTTCTTCCTGCTGTTATGAATATCATAATCTTCTGGTCGACGCCTACACAAATTAGATA--TCAGAGATTAAAC--AAGGTTGTTTGGAG--CATTCGGCACAGCA-GAATACCTCAAAGGAATATCTTGAGCTGCCCAGGATCTCC----ATTTAACCATTCTGAATTC----------CATCTGATTCAAAACATTCCACAGCTGTAAGTACGAACTCAAGTAATCAAGAACAAGTCAAA--TTAAATACCCCCTTCCTATTT--CACTTTCTGGCTACACGTGCTTTGGT----------------AGTTAGGAAAAAACCTCTACCTACTGATTCCTTTGTAAC--AAACAAAGGGTAACAATTTCAT-CTGAAAAAAGAACTTAGACTCATGCTTTAACATACCTTCCGCTCTACATTCTGAACTAGTCTGTTGGACAACAAAATTTACACTCACTTCTAAATCTAGTTAAAATAAATGGTAAAGTATATAATT-----------ACAGTAAAAAGGCACAGACATTACTGTATTTGCCAACTATGGGGTGAAGGTTCTACAAAA-----GGCTTATTTTTGTACATTATTAAATAAAACTGTACGTTATTTGTGAAACGGCTTCTTTCACTGTAGCTTGTTTAGCTAGGCAGGCCAATGCCATTTCTAACAGCTTCTGATCCAAGCAATTTACCAGTAATGCATCAGTGCCATTAGAA--CAGGAAACTCAAGAACACTTAAGCTCCCTAATTAAAATAATTAGTGCTCTCTTTTACACAAGCCACCTTTTCAG---TAAGAGAACTGTTACCTGAGAATCTTACTCTCAGGGAGAAAGCCTGTTTATGAAACAGT------TAAATT--CCAGTCACTGTTATG---TTTAATACAGAACCGAAAACTGGCTGCTAATGC-TGCTTTGTCAGGGAACATAAACACTACTGGGAGACTTCAACGCGAACACAGAAGCATTTTTAAA-------CACAAATCAGCT-------ACACATC----------CCTCCCTCCCTCCCGCAGTGAGCGGTAAAATTACTTATGACAAAGAC----------AAGAAATTGATATTTTCTTGTAATGCTTAATTACCGT--ACAACTTGCTTGCTGAGTAACA------AGCTTTC-----TTTTTATGAAGAGCCATT--TTTCCTCCCCCTTCCCAATTTCAGTTCTTAAAGCCCACTATACCCAGTTACTAAGCTCTTTAAAATGAAAGCAGATTCTCTACGAGCAAAAAGCCCAAAAACCAAAACAGTTGCATCTACAGTAAAATCAGATCAAGAAAAACAAAAGCTGGTGTAAAGAATAAACATACCGCTTTCTTGTAGTTTTGAGAGTGCATTTACGACCGGTATAAAATATGATAGAAACAGTTCATATAGTAGTCCAACTACTGACTTTTAGCTGTAAGCCACATACATAAATGGAGGCCCTGGCAGGCATGAGA--AGGTGTGGTGCTGTTATATGTATAGTTTGCAGTCCATTGCAAAAC-----------CTTCACTTGTATATACTTTATTGCACTGGAAACCTCTTAGCTTAA--CTTCACAAGCCATCTTGGTGTTCAGTCCTTTAAAGCCAAAAATAAGGGGACGCTGCCAGGTTTCCTCCTACCTACTCGTTAGTGTCCtttttttttttttttttttttAAAGATCAAAGAAATGGGGACTCTTGTTGGAT-ATCTGTACCTACCACAGGATGTTTCCACAAAGAGGAAACTTAACCAAAGGTTTCAGCCCA--AATCATACATC----AGTCT-------------------------GTATGCAAAGTGGCTACACAGGGAAAAGGTGTTTGGCAGAAGGGCTAATATCAGTTCTTTGCAAAGACTTCTCCAATTCTGTAACAAGTTACACCCCCTTTTTTCCTGGAAAATGATGTTAAGTTCATATAGCAGTGATCAATAACCATGTCGATCCTCTAAAAA-TACTTT-AAGTCCACAGGTACTGCCATCATCTGGAAAGGTTGTATATACAGACACAGCAACAGCC-----TGTTGGTTTGTTGCCGGGTCTCCAAGGGCCACTCGATCCCTTTTGGAAAGAACCTATTGTTTTCAGAAGCTCAGCAAGATGTGTGAATTCAGTGGTTACATGTTAGAGAATATCTGGCAATGGGGTTAACACAGCACGGTGACACAATTTGAAACAGTCCCAATAATGCTCCTCCTCTTGAATATCaaaataaattaaa-tattttatCCTCAAAATGAGGCGGCTTCTTCTGAAAAATTATAAGTGATCCTT-ATAAAAGTCCCATATTTGATAAGGCTTATCCAGAGACACACCTGAAAGAAAAGGCTTTT-ACAAGATATTAACACATTTTTGGCATATAAATATATCCTTCTCTTCATC-----TAGCCTCCTCATAATAAATCCAA--GCTTACCTACAGCTAGTGTTACACATTGTAATATCTCAATAAATTATCTAGTCTAAACTAGATGGCACTTTAAGAGCTTTTTTTTTTTTTCCTCTGCAAAAGCAAAGATCCCCATTTTCCTCTTGAATAATGAC--AGACCGGGAAATCATGTGAACATGTGAAATCCTCAATGAAGCCACAAACTTGTCCATGCAGCTTGATTTGAGGATTTTCTCT--CTTCTTTATCGCAGGGAAAGCTTT-GACGAATCACATTCCTCCATCACGTTATTCTGATACATGTGCCTATTATCAGTCCAAAGAACGTTTCTAACCTTCCCACGTCCCGAACGGGGTCTCGACGAGATGGTCGTCCTCTTGATCGGGGCTGTGAGTGCATTCTTCTCTTGTGCCTCATTTTATGAATGAGTTGATACAAGTCAATACTTTCATCAGGAGGGAACAGAAGACAAAGCTGGGTTCCACATTCCGGCTCAATTTCCTACAATTAGTTAGAAGTTCAGTAGTGGTTTATAAACCAAGATAAGAAACTCTCCCCAG--TTACATTAACAATACATATTTAAAACAAAAA ...:...............:......................................:..................................................:.--.:...:.......--..:::..:.x....--..xxx:.:.x....-..:.x:..x.x..::...------:x.:.xx..:..xx..----.......x--...x....:----------..xx.x...:x...xx.:.:...x:.-.:.x.x:x..x.:..x.xx.-----.:..::....--......::x.:x:.xxx.x.x--:.:.:....x.x..x.:....x..:.----------------...:x::xx.....x.x..---.x.x.:x::..x...::--.......:.xx.....xx....-..x...xx.:.xx.:..x:.:.xxxx....x.:..:....xxxx..x.x...---.:.x..x.x..:.x..:....x:..x.xxx..:.x.x.x:-------------..x...x.:...:...:.-----------.:.x.x....xx:.:.:.::.:.:.x..--------------...x...x:.xx......-----:::........x:x.xx:x..:x.:...------------..:....--------...:..x------..x.:.xx:..:x.:x:::..:.--..x:...-------------......:..xx...x..x.:x.:x:x:x:x...:x.--:.::.....----.x:x.....xxx:...x.x...x..--.....x:.:::..:....:xx:x::x.x...x..---....:...:.------------.:..x:.::...:..x..x....xx.x..:...:..x------......--.x...x.:x.x.xx.---.....:.x..xx.xx......:::.xxx...::-.x....:xx...x-----------------..:....:.x:.xxx...x..::x::..:..x.x-------..:.....:.x.-------.......----------.:..xx.::x:::x....:x.::::x:.:x.x.x:x.x:.x....x.----------.::....x:....x.::..x...:-......xx.x:x--.x......x.x:.x:xx..:..------..:....-----...x.x...:x.x.x.:.--....x.:xx.:..::...:----------.x..::....----.x.::.:.x...:.xxx.:x...:.xxx..::::.:.:.xx..-------------..:x..................:....-.x.x.::.......x:..........x....:..................:........x.:.........................:.......x.................................x.......................................x.....--......:...x...x...x..........................-----------...............:.x...........................--.....x...x..........:..........x.:...............-.x..........................x:............-----------------...x...........................-......................:.....x..:......:....:...........x....--..:........----.....-------------------------.........x---..........:..-......x..:.........x.x......:...................................x...........--..........x....x........x..:.................x..............-:.....-...................x..........:......x.--.................-----.x.....................x.........:......:..................................................x...x.................:.......:...........x........:.x...:.........................---................x.....-............x..........x.x............x...x..........-...............:......................:....................-.x..::........-.......-..x.....x.:x....:......x..-----......x:..x..::..---...--..:.....xxxx::.:.xx..:........x....xx.:..--.......:........:.x.:x....------.x..x.x:......----.....x...x........................x......--.....::.-------....x..............................x...............................--........:......:x..:....-.........:............:........................................................:.....:..x..x........:.....x.......x............x..:.................x.x..............x:.......................:..:..:.............................x:.:...........x...--------..xxx.....:::........x...:.xx...xx..:..xx...--..:....xx.xxx.::..-::.:........ 111M2D13M2D14M2D14M1D18M6I16M4D8M2I9M10D26M1I20M5I10M2D21M2D26M16D19M3I17M2D22M1D52M3I40M13I18M11D28M14I18M5D28M12I7M8I7M6I23M2I7M13I36M2D9M4I25M2I34M3D10M12I37M6D6M2D15M3D33M1D13M17I34M7D12M7D7M10D47M10D24M1I12M2D22M6D7M5D18M2D19M10I10M4I43M13I27M1I175M2D45M11D45M2D49M1I42M17I31M1D60M2D11M4D5M25D10M3I13M1I76M2I60M1D6M1D39M2I17M5D174M3I22M1D53M1D59M1D14M1I7M1I26M5D17M3I3M2D41M2I26M6I14M4I41M2D8M7I67M2D24M1D245M8I44M2D18M1I12M 2121/2691 78.8% 2905/94230402 0.0% 411/2691 15.3% 27368048 NA +8259 chr4 + 190214555 68324133 68324132 68324254 122 ACAAACCTGTCCATCACGTCCGATCTTTACTGGTTTATGTTCATTCCAAGGATTGGTGAGATGAGCCGACTTAGTGAAGGGTAATTCACGCCTAAATACA-AAGTAATATCAATTACATTCTT chr4 - 94230402 40956735 40956734 40956857 53273546 53273545 53273668 123 ACAAACCTGTCCATCGCGTCCAATCTTTACTGGCTTATGTTCGTTCCAAGGATTGGTCAGATGAGCAGACTTAGTGAACGGCAATTCACGCCTAAATATGCAAGCGGTGTTATTTATAGTTTT ...............:.....:...........:........:..............x........x...........x..:................::-...:::.:.:.x...:.x.:.. 100M1I22M 103/122 84.4% 123/94230402 0.0% 1/122 0.8% 27367398 NA +3650 chr4 + 190214555 68326645 68326644 68326744 100 CAGCTGCATGATCTCGGCTTGCTGCAACCTCCGCCTCCTGAGTTCAAGGGATTCTCATGCCTCAGCCTCCCATGTAGCTGGGACTACAGGCATGCGCCAC chr4 - 94230402 18197106 18197105 18197202 76033201 76033200 76033297 97 CATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..x....x..::x..:xx..-..:..:..:xx:x..:...:.......x.x...x..x.x........::..x........:......--.:...:.... 20M1D67M2D10M 69/97 71.1% 97/94230402 0.0% 3/97 3.1% 50129539 NA +16805 chr4 + 190214555 68329993 68329992 68330327 335 ATAATTTACCTGCAAATCCAGTCAATTTTAAAGACACCTCCCAGCATTTTAGCACTCATTCCTGCTGGAAGCACCCAGTGTATAGGAGATCCTCCGTGATGTGATTCTGAAGAAAGTCTTGCAAACCCTAAGAGAATCATATCA----TAATATAATATGTAGATGCTAATATAATTAATGTT-------TTTATATGTCCAAATTATTTTTATTCTTACCTTGAAATTTTCCACTCTCTCTGACAGAAAATATTAAGATAACACTCCTTGCAGATCTAAATGCAAGATTTAATTTCTTCTCATTTACAGGGAGCGTGGACCATACACCCTACATAAATAACATAA chr4 - 94230402 40957835 40957834 40958173 53272230 53272229 53272568 339 ATTATTTACCTACAAATCCAGTCAATTTTAAATACACCTCCCAACATTTTTGCATTCATTCCTGCAGGCAACACCCAGTGTATAGGTGATCCTCCATGATGGGATTCCGAAGACAGTCTTGCAAATCCTAGGGATTTCACATCAGTTGTAACA----ACAGAAAAGCTACCACACAAAATGTCACTTTCACTTACCTTACTAAAAGCTTATCTCCCTTACCTTGGAATTTGCCACTCTCTCTTACGGAAAATATCAAAATCACACTCCTCGCTGATCTAAATGCAGCATTAAGCTTCTTCTCATTCACTGGAAGAGTTGACCATACTCCCTA---AAACAAAACAA ..x........:....................x..........:......x...:..........x..x.:...............x........:.....x.....:.....x...........:....:.::xx...:....----...:.----.::x.:.x....x:.:.xxx.....:-------:...:x.xx.:...xxx..x.:x::.........:.....x...........x..:........:..:..x........:..x............:x...x.::...........:..x..:..x..x........x.....---...:..x.:.. 144M4I5M4D26M7I142M3D11M 257/328 78.4% 339/94230402 0.0% 18/328 5.5% 27372158 NA +42904 chr4 + 190214555 68332077 68332076 68333407 1331 AGTTTCAACAGAACTGATGCTAATACCTTCGCTTTGGCAAGAGACACATTCTCATGGTTGTTACTCTTTATGAGGAAAAATCTTGCATCTTGAAGCACATATTTGAGTTTACTGGTTTGATCTGAAAAAAAAAG----AAACCCAAATCGATTAACCACAAGCCATTATCACACAAAGGGGTCAAAACTGTACTAACTGAAATTAGCCCTCCACAA------------CCCAGCTAA-----ACTTTTAAAACGCAACAATCACCCATTCAACCTG------GAAGGCTAAGCCACATGTAATAAAGCAAAGCTAAGAAAAGACAA--------TCAGCATATTGCAAGAAAGTAAA------------CCTAACCTAGTGATGTTCCGATATATCAAATCCATATTTAAGTATGAAAATGGTTACCAAGTTTTATAGATTTTCTTACTCAGATTCAAGAATAACAGACCATTATATACATACATATATATACACACACATCTATATATAACACATACACA--------CATACACACACACACC-CATCCCATTTTGTC-------CAAAAACTAAAATATCCTGAAATGTTTGGTATTATTCTA-AAAAATATGCAGTAAGAAGCAGACACAGAGCTTTCTATGTTAAGATATTATTTTTTGCTTCA---TGTAATATATCGGAACATTACTACATTAAAAGCAGCTATTAATGGAGAACCAATAAGGAAAAATAATGACTATGCAGCATGCAATGAAAACAATTTCAAATTTAAATGATACCTTTTCGGACAGCACGAACGGAAGATGATAATTTCTCATGCTTCTTTTCTGAACCTGTATTTAGCCAAAGTACATTT-GTTCAGATTGAGCTTTAATAGAGATAAGACAAAATTTCTACAGTCTTGTCACATAAAATTCTCATTCAAGACAAATTATTCTTCCTGGCGC--ACCCACACACACAAAAAAA-ACTTCTCAATGTGTACGAGTGTTT------------TGCTT-------TTTGGGTTGTTTGGATT-------TTTTTAAAAGTATGTATATTTGAACAGTTTCCCACTCAGAAAACTAGTCACTGAATCATCATCTTCCAAGA---AAAAAAAAGTGAAAATTCCACTTAAGCAGTAACAGAACAGGATTAAAATAATAAGAAAAAGCTTA---------------------GTTTTCTCTAGAATTATT-ACACTGAACATGCCAAAAATCAGTGCTAATGGACATCAACAAGTTCACACTAAACTACAGCCTCCACACGCTTTCTAAAGCAGATTACATT-------------------AGAATC-----AAGTCAGAT--ATGATCACAAAATG---AGAATACCTGCATATGACTCTGATGCAGAGCTTCCACTTCTATCAAAAACAATTGGAGATATGCCTCTAGCTCTCTTCCTTTCCTTCTTTTTCTCATCTAAAAAGAA chr4 - 94230402 40960826 40960825 40962217 53268186 53268185 53269577 1392 AGTTTCAAGAAAAATTAA---CATACCTTAGCTTTAGCAAGTGAAACATTTTCATGGTTATTACTCTTGATGAGAAAAAATCGTGCATCTTGGAGAATGTATTTAAGTTTACTTGTTTGGTCTGAAAAAAAAAAGCATAAAATAAGTTCAATTGTAAAAATTCAGTTTTCAAA-AATGTTGCTGTAAGTGTA--GATAGTTATTTGCCTCCTTCAAAATAGACTGTATCCCACCCAATTCCTACCTATGTATCAAAACAGTCAACCACCCAACTTGAAATTTGAAATCTAAGCTGTATAGTACAAA---ATGCCAAGGGAAATCAAACTTAAACTTAAGATATTCAAGTAAAGAAAAAACTAAAAGTAGCAGGATTCAGTGATGTTCCGATATATAGGACTTATTTCC---------------------TTCCTTGAGACTCTCTGAATGAATATCAGGAA----------------ACATACATATCAACATTAATCCTCCAATAGATATTACTGATACAGTCCTCTTTTTACATGGAAGCACCTCTTTTTGCTTTGTTGCTTCTGTGAGGAGGAAAAAAGGCTGAAGTTTTTG-CATTACACTCTGAACACATGCA-----AAATTAGCTCAAGATTTACT-CATTATGCTCACAGTTATGGGCTCAAAATGCTTTATATCGGAACATTACTACTTACACAAT-----TTCATG-------AACAGAGACAATGGCTTGCTGTGGGGCATGCATTAAAAA----TTCAAATTTAAATGATACCTTTTTGGACAGCACGAACGGAAGATGATAATTTCTCATGCTTCTTTTCTGAACCTGTGTTTAGCCAAAGTACATTTTGTTCAGATTGAGCCTTAATAGAGATAATATACAATTTCTACAGCCTTGTCACATACAATTTTCATTCATGACAAATTATGCTTTCTGGCGCGCACCCACACACACAAAAAGATACTGTTCCATGTGCACGAGTGTTTGTTTGTTTTAATTGTTTGGTTGGTTTTGGGTTGTTTGGTTCGGGTTTGTTTTTTAAAATA---GCATTTGAACAGTTTCCTACTCAGAAAACTAGTCACTGAATCATCATCTTCCAAGTTTTAAAAAAAAGTGAAAATTCCACTTAAGCA---ACAGAATAGCATTAAAGTAACAAGAAAGCCCACATTCTCCTCCCCACCTCCCCCCATCTCCTCCAAAGGTACCCACACACAACATGCCAGAAGTCAGTATTAAA--------------TTATACAAAGCTACATACCCCATAAA-TCTCTACAGCCAGTTACATTTATTTCAGACTACTCATTAAGACTCGATGCAAGTCAGGACAACAAGCAATAAAAGGAAAGAATACCTGCATAGGATTCTGATGCAGAACTTCCACTTCTATCAAAAACAATTGGAGAGATACCTCTAGCTCTCTTCCTTTCCTTCTTTTTCTCATCTAAAAAAAA ........x.:..x.x.x---x.......x.....:.....x..x.....:........:........x.....:.......x.........:..x.::.....:........x.....:.............:----...x:x.:x..:...:xxx.x.xx.x:..x...x.-..x.xx.:::x..x....--:.:x.xx...x...::.:x...------------....x.:..-----..:.x.:x.x.:x....:...x...::....:..------...:x......:::..:xx.:...---.x..:...::..:x...--------.:.:x.....xx.:x....x...------------.xx:.:::..................x::.:::..x.::---------------------x.::.xx...:.:...x.x.x.:xx...:...----------------..........xx.:.:xx.:x.x:.x...x...x:..xx.:...--------:x....::x.x:....-.x.:::::.....:-------::.::.xx....x.xx.....:.x....-:....:x..x-:..x.:.....-----..::x::.x..::::..x..-::...x.x.xx:.x..x.x.x:...---..:xx...................x.xx.x.::-----..x...-------..:.::..x..xx:x.x:..:..x:.......x.:....----.......................:....................................................:..................-.............:.............x.:.x...........:...........x....:.......x..........x...:.......--.................:.-...x:..x.....:..........------------..:..-------..............x.:-------.....x...:..---::...............:.....................................x---............................---......:..x......:...:......:xx.x:.---------------------:.:.:...:.:.:x..::-....xx.........:..:.....::...x--------------.:.:..x..:.....xx.:...:.x:-.:....x...x::.......-------------------...x..-----.......:x--.::.x..xx...x.---..............x..:...........:.............................x..:.........................................:.. 18M3D113M4I35M1D18M2D22M12I9M5I34M6I24M3D17M8I23M12I39M21D32M16D44M8I16M1I14M7I28M1D10M1I11M5D20M1D25M3I33M5D6M7D39M4D95M1I91M2I19M1I24M12I5M7I17M7I12M3D56M3I28M3D34M21I18M1I30M14D26M1D20M19I6M5I9M2I14M3I107M 939/1241 75.7% 1392/94230402 0.0% 241/1241 19.4% 27371251 NA +43387 chr4 + 190214555 68337024 68337023 68338409 1386 TACCTGATCCATCTGTGCCTGAACCAGATCTGACAGACCCATCTGTGAAGGAAACAGATTCAGAACCAGAGTCACTGGCCTCACTTCGAGTGTCATAATCATTTCCCTCCTCTTTCTGGTCTCTCTCATCCTGTTCATATTCTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCATCTTCATCCACCTCTTCATCTTCTTCTGCATCTTCTTCTACTTCTTCATCTTCCTCCACATCTTCTTCCACTCCTTCCTCCTCATTCTCAGTGTTGTTCCCTTGCTCATCAGAAGAACCACTGCTGCCAGTCTCATGGTCAGAGCCATATTCTTCAGAGTTCACTTCTTCCTTAGAAGACTGGCTGGATCTGCTTGCACGTCTATCCACTTCAAGCCCAATTCTCTGATGTTTAAAGAAAAAGGGAATCAGCAGTCATATAAAAGACAAGGTCAGGGTGAATAAACAGTTCTAAA-------GCCTCAAAAAG-----AATGGCTTTCTGTTTTATATCTGCAATAATATTTACTACCTCAGAACCATCTGGCGTAGGAGATTTGGCCCTCCTTTCAGGATCCCTTTTCCGGACACAGGTTTTTTCAGGTTGATTCTTATAAGGTTCTCTGGAGGCACTACTTGATAGACGAATTTTCCGATCAGCATCTAGACGCTTGTTTCTTTCAGATCTTTGATATTCCTCATTTTTATACTCTGTGGCTGACTTTCCTTTTGTACTAACTATTCTTTTGTTATTGCTAACAGATGAGCTCAGTGGCTTAGAAACCAGTTGTCT---AGAATGGACAGAAGGCTTTTGTCGTTTGGTATCAGTAGATTCCATTCGATCACTTTTTCTTTTTGATCCTT---TAAAATACAATGTAAAA----------------AAAAAAAAAAGAAGTATTTGTAG-----------TATTCCATTTAT------------------------TTCACCAAAGACTGACAATAATATATACA--------TCAGGAAGGGGGGA-----TAGGCCTCATTT----CTTTAAAAG---------TC-------TTCTGAGAGATTTCTTCTCCAGAGTTAATCTAAAAGAAAACAT--------AGCTTTCAACTATGGGAATAAAACCATAT---------------------ATTTGAGAA------------GTTTCATAT-ATTAGAAAAAA----ACAGATTATCCC-----------TATTCATATGGATACCAGTTTATTATGTACATTTAGT---------------GTTAACTGCCT-----CAAGGAACAAGCACAAAAAAGCACAGTCATTT----------------TTTTTAAGAAATTGAATC---------------------------------------------------TCCTCTATTTATACTGTTATTTCAACAAAAATAATAGAACTCTTACATACCCTTTTTCTCATTTTTATCTTGTTCACTCTCTGGATTATACAGTTCATCATCTTGTTCTGGTACTTCAGTTAAAATATCATCCAGAACATTAAGTTCTCCATCTGCAAATAAAA---TTAAAAATTAATA chr4 - 94230402 40963578 40963577 40965127 53265276 53265275 53266825 1550 TACCTGATGCATCTGAACCAGATGCAGATCTGACTGACCCATCTGTGAAAGACGCAGATTCAGAATCAGAATCGCTGGCTTCGCTTCGCGTGTCATAGTCATTTCCTTCCT---TCTGATCTCTCTCATCCTGTTCGTACtcttcttc---------atcctcttccccgtcttcttccacctcttcatcctcctccccttcatc---------------------------atcttcttct------------------------tcttccattccttcctcctcgttttctGTATTG---CCTTGTTCA---GAAGAGCCACTGCTACCAGTCTCACGATCTGAACAATATTCCTCAGAGTTAACCTCTTCTTTAGAAGAATGGCTGGATCTGCTTGGTCTTCTATCCACATCATGTCTGATTCTCTGATGTTTAAAGAAAAAGCGAATCAGTGGTCACATA----ACATTGTTAGGATGCACACACAGTCCTAAGACAACGTGCCTTACAAAAGTCTCAGTTGTTTTAT-TTATAAGGCAGCAAGAACATTTAATACCTCTGAACCATCTGGTGTGGAAGACTTTGCCCTTCTGTCAATATCCCTCTTCCTCAGACAAGTCTTTTCTGGTTGTCCTTTATAAGGATCCCTGGA---ACTGCTTGACACGCGTGTTTTTCGATCACCATCTGGACGTCTGTTTCTATCAGACCTCTGGTACTCCTCATTCTTGTATTCTGATACTGGCTTTCCTTTTGTAGTCACTATTCTCTTGTTATTGCTAACTGATGAACTAGGAGGCTTTGGCATCATCTGCCTTGATGAATGCACAGAAGGTTTTTGTCTCTTGCTTTCAACGTTTTCCAACCTGTCACTTTTTCTTTTTGATCCTTAAATAAGAAGAGATATCAAACTCAACGTTATTTTGTATAACAAATCTGAACCTCTACAGAGACTCCTGCTTTCTCTACTTATGATAAATGCTGTTATGGTAAATACTCAGTCTAAGTTCAGTAACAATATTCAGAAGGGCTTGTTTGGAACAGCTGATGCTGTAAAACTCACATAACACTTTAAAAGAGCAACTAATCCTTTCGGTTTTGGTAGGTGTTTTCT----AAATGTTATATACGGAAACATTAAACAAATGCTTATGA-TACTGGCCTAAAGCCATATTAACAACTGAGCTAGAACAAGACTTGTGGACCCCCTTGCTCTGTTTCATTTCATTAAAGCAAATAGTACAGACTTTTCTAACACCAAATACACTCATGACTATGCAGACTCCGCAATTACTTCTGAGGCAAAAGGTAACCTAGTTAAATGCTTGTTTGCAAGG--TCAG-ATGAAAGAGCAGATCCCCTTGGAAGACTTTCTGGACTCCTTAACTCTTTGAATCGGGTTCTAAAACCTGTTACTCAAAGACTTAACCCTAATAAGACAGATTTTTTTTTCTTTTTACACCTTTTACATAAGACATCCACTACAAAAGTCACCTACCCTTCTTCTCACTTTTATCTTGCTCGCTGTCTGGGTTATATAACTCATCATCTTGGTCAGGAGCATCAGTTAAAATGTCATCTAGAACATTTAGTTCACCATCTGAAAACAAAAAAGTTAAGAACAACTA ........x......x:..x..xx..........x..............:..x:...........:....:..:.....:..:.....x........:........:....---....:.................:..:........---------x.....:...:.x..:..:...x.......x.........:..:....---------------------------..........------------------------.......:............:..:..x..:...---.....:...---.....:........:.........:.:..x..:.x......:........x..:.....:........x................xx.x.........x...x.:.::........................x.......::....:...----...xx..:...:..x.:.x.....:....:-------....:.x...:-----.:.x.:...x.-..x..x:x.x....x..:.....x......x...........:..:.:...:..x.....:..x...:x......:....xx.x...:..:.....x.....x:::........x..:.....---...:.....:.x:..x:....:......x.....:....::.......x.....:..:..:..:........:..:..:....xx:...:.............x.x........:..............x.....:..x:.x.....x.:x.:..x:..:..---x.....x........:.......x:...x.x...:::xx.....x:.x:......................---...:.x:x:..:.x...----------------.x..x...xxx:.::x.:.::..-----------.x:..:.:....------------------------.:x::.x...x:::::..:.....x:.x.--------.:x....x:.xx..-----..::x....:x.----.........---------..-------..:..:x..:.x.:....----.:x.:x.x..x.x.:......--------x....x::.-..:x..xx....:......---------------------.:...x.:.------------.......x.-....:.:x...----.....:.x.:.:-----------:.:....:xxx..:.x:::.:xx:.xx...x.:.::x---------------.....x...:.-----.....--:x..-.::...:....x.x:.x:..----------------.::....xxxx.......---------------------------------------------------.::...x....:..:x..xx:x:..x.x.xx:.x..x..xxx.:..x.......:......:..........:..:..x.....:.....:.::...........x..x..x:.x...........:.....:........x.....x.......x...:....---....:..:x.x.. 111M3D34M9D48M27D10M24D33M3D9M3D150M4D30M7I11M5I11M1D123M3D162M3I71M3I17M16I23M11I12M24I29M8I14M5I12M4I9M9I2M7I18M4D21M8I9M1D19M21I9M12I9M1I11M4I12M11I37M15I11M5I5M2D4M1D20M16I18M51I164M3I13M 969/1301 74.5% 1550/94230402 0.0% 334/1301 25.7% 27373446 NA +3127 chr4 + 190214555 68337190 68337189 68337289 100 CTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCATCTTCATCCACCTCTTCATCTTCTTCTGCATCTTCTTCTACTTCTTCATCTTCCTCCACATCT chr4 - 94230402 58401563 58401562 58401662 35828741 35828740 35828840 100 CCCTTTTTTTTCCCCCCCCTCTCCATTCTGCACTATAATTTAAAACATACCCCAACATTCCTCCTCATCCTCTTCAATGACTTCATCTTCATCCCCATCT .:...::.::...:..:.:..::.x.:..x.x..x:.x:..x.xx..:x:.::x.:x...:..:x....:.....x.:xx..........x...x..... 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 9935627 NA +3150 chr4 + 190214555 68374737 68374736 68374805 69 TATATAGTAAAAAAAATGTTCCTTTTACAGTTTTCAATTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 3834813 3834812 3834879 90395524 90395523 90395590 67 TATATAG-GAAAATAATGT-ACTTTTGTAATAATTACTCTTTTTTTTTTTTTTTCTTTTTGAGGTGAAG .......-:....x.....-x.....::.:.xx.:.x.:...............:........:..:.. 7M1D11M1D49M 53/67 79.1% 67/94230402 0.0% 2/67 3.0% 64539924 NA +3001 chr4 + 190214555 68375899 68375898 68375979 81 TCTGTAAAAACAATTTAAAGAGAGAAAGAGAAAGATAGAGAGAGAGAGAATTCTTGTTTCAATGACCT---AGAGGAAAAAAGA chr4 - 94230402 67459014 67459013 67459085 26771318 26771317 26771389 72 TCTGTAAGAAGAGTTTAAAAAAAAAAAGAGAGAG--CAAGAGAGAGAGAATT----------TGGTCTGTGAGGGGAAAAAAAA .......:..x.:......:.:.:.......:..--x:..............----------..::..---..:........:. 34M2D16M10D6M3I13M 56/69 81.2% 72/94230402 0.0% 15/69 21.7% 916885 NA +3381 chr4 + 190214555 68387970 68387969 68388052 83 CTGCAACCTCTGCCTCCAGGATTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCACCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.x..:......:.x...x.xx.x........::.............:....--.::x......::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 50190844 NA +3803 chr4 + 190214555 68408997 68408996 68409078 82 CTGCAACCTCTGCCTCTTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCGCCGT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:..:..:xx:x..::............x...x..x.x........::...........:.:....--.:..::..:.:.. 67M2D13M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 50211871 NA +3035 chr4 + 190214555 68413592 68413591 68413648 57 TCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGTGGAGAGGAA chr4 - 94230402 44177688 44177687 44177744 50052659 50052658 50052715 57 TCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGA ...:x..x...............:....:.:.x.....x:x.:..:.x.......:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 24235904 NA +3725 chr4 + 190214555 68417262 68417261 68417338 77 ATATATATATATACACACACACAC----GTATATATATATATATATATATACCGTATATATATATATATATATATATATAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACAT .....:...:.........::...----..:.:...:...:...x.....x.:...x..:....x...x...x:.:..:.. 24M4I53M 58/77 75.3% 81/94230402 0.0% 4/77 5.2% 6931889 NA +3362 chr4 + 190214555 68417293 68417292 68417406 114 TATATATATATATATACCGTATATATATATATATATATATATATATATATATATACACTTTTTTTCCAACTCAATATTTTGCTCAAGTGTTTAA---TTGCAAGTAGTATGCTGATG chr4 - 94230402 87389224 87389223 87389339 6841064 6841063 6841179 116 TGTGTATGTACTTACACAATTTATATATATGTAAGTATGAATATATGTATATGCACAA-TTTTTTCAAGATCTACTTTTTGCCATAGCATTGGATTTTTGGAATTTATTAGCTGATG .:.:...:..:x..:..x:.x.........:..x:...:x......:.....::...x-.......x.:x..x.:x......:xx..::..x:.---...x..x.x:.xx....... 58M1D35M3I20M 76/113 67.3% 116/94230402 0.0% 4/113 3.5% -18971931 -75258471 +3329 chr4 + 190214555 68444379 68444378 68444451 73 AGGTGTTTTTCAAAGACTACTTGCAAAAAAAAAGAAAAAAAAAAAAGAGACTTAAAATGGCCCCCAAAATGTT chr4 - 94230402 38552510 38552509 38552582 55677821 55677820 55677893 73 AAGTTCCTTTTAAAAACAACTTGCAAAAAATAGAAAAAAAAAAAAAAAGATCTGTTCTGGATGCTAAAATATT .:..x::...:...:..x............x.::............:...::.:xxx...x:x.:.....:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 29891869 NA +3419 chr4 + 190214555 68471117 68471116 68471297 181 ATAGTAAACAGTAGCAATATAGAAGGAAACATTT--ATGGATGTATT-------------TTATGTGTGCATTTCATGTAAGTGATAAAGAAAAAAGCAGATTGTGATATTACCC---TTCTTTCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCTC----TCCCTCTCTCTCCTTCC--TCCCCTCCATTCCCTTCTCTTCA chr4 - 94230402 86871980 86871979 86872160 7358243 7358242 7358423 181 ATTGAAAACTTTAGCAAGTTGGAAGGAAAAGTGTGGACAGATCTATTCATTTCCTTCCTCTTCTGTCTGCATTCTA------------------------ATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCCCCATCTCAGCCATGGTCTCCTTTTCA ..x.x....xx......xx.:........x:.x.--.::...x....-------------..x...x......::.------------------------...x.:..x:.x..:---.:..:..:x..:..:.....:....:.:...x.........----:..:.....:.:..:..--..:.xx....xx:..:..:.... 34M2I11M13I16M24D15M3I41M4I17M2I23M 111/157 70.7% 181/94230402 0.0% 48/157 30.6% -18400863 -75829539 +4158 chr4 + 190214555 68471181 68471180 68471445 265 AAGTGATAAAGAAAAAAGCAGATTGTGA-TATTACCCTTCT------------------TTCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCT------CTCTCCCTCTCTCTCCTTCCTCCCCTCCATTCCCTTCTCTTCACTTCCTTTTTCCTTTCCCTTCTCCTTCCTTCCTTTTCTCTTTTCTTTCTTTCCTCCCTCCCTCCTTTCTTCACTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCCTGCCTTTCTTTCTTCTTTTCTTTTCTTTCTTTC----ATTTTCTTCT chr4 - 94230402 92912737 92912736 92912998 1317405 1317404 1317666 262 AAGTAGCAAAGAAGAAAACAAATTGTAACTCTGAGTTTTCTAATGGAAGAATGGGCATGTTTTTGGCATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTT------TCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCC----------ACTTGTGCTCTCTCTTCCCTCCCTCCTGACT-CATTTCCACTT---------------CTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCT ....:::......:...:..:.....:.-.x.x.x::....------------------..:..xx.x.....::.::.:x..x...:x..xx------......:.xx........:------........xx.xx..x.x........:.xxx.:.xxx.:..:.:..----------x:..x:x:...:..:............xx..-..:....x.:.---------------...x:..:xxx:x.......::.....:......:.....:.----..:..x.... 28M1I12M18I34M6I19M6D46M10D31M1D11M15D42M4I10M 157/233 67.4% 262/94230402 0.0% 61/233 26.2% -24441556 -69788846 +3545 chr4 + 190214555 68471213 68471212 68471317 105 ACCCTTCTT--TCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCTCTCCCTCTCTCTCCTTCCTCCCCTCCATTCCCTTCTCTTCACTTCCTTTTTCCTTTCCCTT chr4 - 94230402 78374922 78374921 78375028 15855375 15855374 15855481 107 ACCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCTT ......:..--.::....:.x..::...:..:..::.............:xxx...:...:.:xx.::x....xx:.:....:x..xx:.:..:.:..:..x.:... 9M2I96M 67/105 63.8% 107/94230402 0.0% 2/105 1.9% -9903709 -84326693 +3212 chr4 + 190214555 68471218 68471217 68471265 48 TCTTTCTTTTCTTTTCTCTTTTCTTTTCTTTCTCTCTCTCTCCCTCTC chr4 - 94230402 88692422 88692421 88692469 5537934 5537933 5537981 48 TTTTTTTTTTCTGTTCTTTTTTCTTTCCCTTCTCTCACTCTCCTCCTC .:...:......x....:........:.:.......x......::... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -20221204 -74009198 +3119 chr4 + 190214555 68471229 68471228 68471294 66 TTTTCTCTTTTCTTTTCTTTCTCTCTCTCTCCCTCTCTCTCCTTCCTCCCCTCCATTCCCTTCTCT chr4 - 94230402 6886337 6886336 6886402 87344001 87344000 87344066 66 TTTTCCCTTTTCTTTTCCTTCTCTTTCTCTCCCAAACATTTCTTGCTGTTTTTCTTATCCTTCTTT .....:...........:......:........xxx.x:.:...x..x:::.:.x.x:......:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 61584892 NA +3074 chr4 + 190214555 68471295 68471294 68471341 47 TCACTTCCTTTTTCCTTTCCCTTCTCCTTCCTTCCTTTTCTCTTTTC chr4 - 94230402 50697976 50697975 50698022 43532381 43532380 43532427 47 TCCCCTCCTATTTCCTTTCCTCTCTCCTTCCTTCTCGTTCTCCTTTC ..x.:....x..........::............::x.....:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 17773319 NA +4344 chr4 + 190214555 68471304 68471303 68471461 158 TTTTCCTTTCCCTTCTCCTTCCTTCCTTTTCTCTTTTCTTTCTTTCCTCCCTCCCTCCTTTCTTCACTTCCTCCTTCCCTCCCTCCCT----CCCTCCCTTCCTGCCTT-TCTTTC--------TTCTTTTCTTTTCTTTCTTTCATTTTCTTCTTTTTTGGCCCACAGTC chr4 - 94230402 59424944 59424943 59425111 34805292 34805291 34805459 168 TTTTCCTCTGCCTTCT---TCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCC .......:.x......---...:..x...............xx:x.:..xx.::.:..x.x:..:...........:x::.:x.....----:::..::...x...:..-..x...--------..:..:x.x...:...:.::.x.::..x.....:::x:.:.x...:. 16M3D69M4I17M1I6M8I47M 103/155 66.5% 168/94230402 0.0% 16/155 10.3% 9046360 NA +6864 chr4 + 190214555 68477377 68477376 68477633 257 ACCCTGCCAGATGGACTGCTTCCTTTGGAGTAACAATAAAACCTTCGAAAATGAAACGGGGTCTCCGGAGAATAATTGTCCATGAAAAATACAAACACCCATCACATGACTATGATATTTCTCTTGCAGAGCTTTCTAGCCCTGTTCCCTACACAAATGCAGTACATAGAGTTTGTCTCCCTGATGCATCCTATGAGTTTCAACCAGGTGATGTGATGTTTGTG--------ACAGGATTTGGAGCACTGAAAAATGATGGTGAG chr4 - 94230402 41060075 41060074 41060331 53170072 53170071 53170328 257 ACCCTCACAAGTGGACTGCTACTTTTGGAGCTCTTTTGAAGCCACCAACTTTGAAACGATCAGTCAAGACCATTATTATTCACGAAATGTACCGCTACCCAGAACACGATTATGACATTGCACTTGTGAAGCTCTCTAAACAAGTTGAGTTTACAAGTAACATACACCGCGTTTGTCTGCCTGAGCCATCTCAGACTTTTCC--------ATATAATATTTATGCTGTCATCACAGGCTGGGGAGCGCTTACCAATGATGGTGAG .....xx..::.........x.:.......:xx:xx.:..:..x:.:.xxx.......:xxxx..x:..xx..x...:.:..:....x:...x:x:.....xx...:..:.....:...x.x....:::....:....:x.xx...xxx.x:....:.:xx:....:x.x........x.....xx....::.x:xx....x--------..:.:..:...:..--------.....x.xx.....:..x.xx............ 202M8D14M8I33M 161/249 64.7% 257/94230402 0.0% 16/249 6.4% 27417302 NA +7030 chr4 + 190214555 68478817 68478816 68478995 179 TCTACAAATACAAAGACTTTTTTTTCTTTTAGGTTACAGTCAAAATCATCTTCGACAAGCACAGGTGACTCTCATAGACGCTACAACTTGCAATGAACCTCAAGCTTACAATGACGCCATAACTCCTAGAATGTTATGTGCTGGCTCCTTAGAAGGAAAAACAGATGCATGCCAGGTAA chr4 - 94230402 41013602 41013601 41013780 53216623 53216622 53216801 179 TCTGCTAAGTCTAATATTACTTTTCCTTCTAGGCCCTAGTGTTAATCAGCTTCGACAAGCAGAAGTAAAAATTATTAGCACTGCGGTTTGTAATAGACCACAAGTGTATGCTGGAGCAATAACACCAGGAATGTTGTGTGCTGGATACTTAGAGGGACGGGTGGATGCTTGCCAGGTAA ...:.x..xx.x..x.:.x:....:...:....::x:...xxx.....x............x.:..:.xxx.:..x::.:..:.:::...:...::...x....:x..::x..:x..x.....x..x:.......:........x.x......:...x:::::.....x.......... 179M 119/179 66.5% 179/94230402 0.0% 0/179 0.0% 27465215 NA +3077 chr4 + 190214555 68482566 68482565 68482620 55 TAATGTGGCAAAACTGCATCTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 86759767 86759766 86759821 7470582 7470581 7470636 55 TAATGTAGCAGAACAGCATTCCCTGGAATGAAAAAAAAAAAAAAAACAACAAAAA ......:...:...x....::..xx:..x:................x..x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -18277201 -75953201 +9002 chr4 + 190214555 68496598 68496597 68496806 209 TAATGAACTGAAT--TATGAATTACTAATTTCTGTC----------TTCTCCTTTAGGGTGACTCTGGAGGACCACTGGTTAGTTCAGATGCTAGAGATATCTGGTACCTTGCTGGAATAGTGAGCTGGGGAGATGAATGTGCGAAACCCAACAAGCCTGGTGTTTATACTAGAGTTACGGCCTTGCGGGACTGGATTACTTCAAAAACTGGTATCTAAGA chr4 - 94230402 41014139 41014138 41014359 53216044 53216043 53216264 221 TAGTGAAGTGAATGTTGTTTGCTTTTTGTTCCTGTCCGCTGACATTTTTCTCTTTAGGGTGATTCTGGTGGGCCACTGGTTCATGCAAATTCCAGAGGAATCTGGTATCTCGTGGGAATAGTGAGCTGGGGTGATGAATGTGGCAAGGCTGATAAACCAGGAGTGTACACACGAGTGACTGCATATCGAGACTGGATCGCTTCCAAAACAGGCATCTGAAA ..:....x.....--.:.xx::.x:.x:..:.....----------..:::...........:.....x..:.........x:.x..:..x.:....:x........:..:.:x.................x..........xx..:x.::.:..:..x..x..x..:..xx....x..x..x.xx..:........::....x.....x..:....:.:. 13M2I21M10I175M 151/209 72.2% 221/94230402 0.0% 12/209 5.7% 27482459 NA +10558 chr4 + 190214555 68496613 68496612 68496804 192 TGAATTACTAATTTCTGTCTTCTCCTTT------AGGGTGACTCTGGAGGACCACTGGTTAGTTCAGATGCTAGAGATATCTGGTACCTTGCTGGAATAGTGAGCTGGGGAGATGAATGTGCGAAACCCAACAAGCCTGGTGTTTATACTAGAGTTACGGCCTTGCGGGACTGGATTACTTCAAAAACTGGTATCTAA chr4 - 94230402 41062456 41062455 41062653 53167750 53167749 53167947 198 TAAATTGTTTTTTTTTTCCCCCTCCTCTTTCTCCAGGGAGACTCTGGGGGACCGCTGGTTACTCCAGATTCTAGACTGATGTGGTACCTCGTGGGAATAGTGAGCTGGGGAGATGAATGTGCCAAGCCAAACAAACCTGGAGTTTACACACGAGTGACTTATTTCCGTGACTGGATTACCTCAAAAACTGGCATCTAA .:....::.xx...:.x:.::.....:.------....x........:.....:.......x.:.....x.....xxx..x........:.:x.............................x..:..x.....:.....x.....:..xx....x..xxx:..x..x...........:...........:...... 28M6I164M 151/192 78.6% 198/94230402 0.0% 6/192 3.1% 27434157 NA +3304 chr4 + 190214555 68536414 68536413 68536475 62 ACTTGGGCTCCAGGCACAAAACAAACAAACAAAA----CAACAACAACAGCAACAAAAAACTCCTG chr4 - 94230402 20093804 20093803 20093869 74136534 74136533 74136599 66 ATTTTGGCACCTGAAAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAACCCCCG .:..x...x..x.:x.xx................----.........:.:...........:..:. 34M4I28M 50/62 80.6% 66/94230402 0.0% 4/62 6.5% 48442610 NA +3523 chr4 + 190214555 68536432 68536431 68536514 83 AAACAAACAAACAAAACAACAACAACAGCAACAAAAAACTCCTGTAGCTAGCTTGGTGTCTGCCCAAACAGCTCCCCAGTTTG chr4 - 94230402 37986053 37986052 37986126 56244277 56244276 56244350 74 AAGCAAACAAACAAAACAACAGCAACAACAAAAAACAGTGTTAGTAGTTAATTTGGC---------AACAGCACACCAATTTG ..:..................:.....:...x...x.::x::x....:..::....:---------......x.x...:.... 57M9D17M 56/74 75.7% 74/94230402 0.0% 9/74 12.2% 30550379 NA +3791 chr4 + 190214555 68539860 68539859 68539931 72 CTGCAACTTACGTCTCCTGGGTTCAAGTGATTCTCATGCCTCAACCTCCCAAGTGTCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:.::.x:x..:.............x...x..x.x....:...::.....:x....:......x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 50342734 NA +3181 chr4 + 190214555 68588454 68588453 68588531 78 TTTGTTTTTTATTTTAAATTGTTTCAGCTATTTTTTTTTCTTCTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGC chr4 - 94230402 40100164 40100163 40100241 54130162 54130161 54130239 78 TTTATTCTTTCTCTTCATGTGTTTAAGTTATTTCTGTATCTTCTCCACCCATTTTTTTTTTCTTTTCTTTTTCTAGAC ...:..:...x.:..x.xx.....x..:.....:.x.x......xxx:::x..........:....:.....:x..:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 28488290 NA +3430 chr4 + 190214555 68588458 68588457 68588522 65 TTTTTTATTTTAAATTGTTTCAGCTATTTTTTTTTCTTCTAGCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 19650851 19650850 19650915 74579488 74579487 74579552 65 TTTTATTTCTTGAACTATTTCAGTTATTTTTTTTTCCTCTGTCTTTTTTAAGTTGTTTGTTTTTT ....x.x.:..:..:.:......:............:...:x.......xxx..x...x...... 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 48937607 NA +3621 chr4 + 190214555 68615257 68615256 68615326 70 CATTTATATATGTGTATATATACATTTATATATATATAAATGT--------ATACACACACACACACACACACACAGA chr4 - 94230402 8395787 8395786 8395864 85834539 85834538 85834616 78 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ...x.:.:.......::...x....x...x..:....:x...:--------...................x.....:. 43M8I27M 56/70 80.0% 78/94230402 0.0% 8/70 11.4% 60219470 NA +3038 chr4 + 190214555 68615264 68615263 68615338 75 ATATGTGTATATATACATTTATATATATATAAATGTATACAC--------ACACACACACACACACACAGAAAGAGAGTAGTA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.......:.:.:...xx.:..:...x..x..:.:..::.--------.:...................x.x.:.xx.:.. 42M8I33M 54/75 72.0% 83/94230402 0.0% 8/75 10.7% 60219476 NA +3651 chr4 + 190214555 68649354 68649353 68649425 72 CTGCAATTTGCATCTCCTGGGTTCAAGTGATTCTCATGCCTCAATCTCCCAAGTATCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:::::x.x..:.............x...x..x.x....::..::......x....:......x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 50452228 NA +3533 chr4 + 190214555 68649908 68649907 68649981 74 CTGCAACCTCCGTCTCCCGGGTTCAAGTGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:...........x...x.xx.x....:...::::.........:....:.x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 50452782 NA +3302 chr4 + 190214555 68664249 68664248 68664298 50 TCAATGTATTCTCACACCAAAAAAAAAAAAAGAGAGAGAGAAAGAGGAAA chr4 - 94230402 87676331 87676330 87676380 6554023 6554022 6554072 50 TCAGTGTATTCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA ...:.......::..xxx.......................:....::.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% -19012082 -75218320 +3060 chr4 + 190214555 68689760 68689759 68689819 60 AAGACAAACAAAACAAAACAAAACAAAACAAACAGGTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865307 4865306 4865366 89365037 89365036 89365096 60 AGGAAAAACAAAAAACAACAACAGAATCCAAAAAGTATTCTTTTTTCTTTTTTTTTTTTT .:..x........x.x.....x.x..xx....x..xx..:......:............. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 63824453 NA +3031 chr4 + 190214555 68710750 68710749 68710803 54 TTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGC chr4 - 94230402 5847642 5847641 5847695 88382708 88382707 88382761 54 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ....x.x....:...:......:.::.........x.xx.........:x.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 62863108 NA +3007 chr4 + 190214555 68718084 68718083 68718149 66 TCTGTTCTGAAAAAATGTAAGTTGTAATAACTAAAAAATTAAAACAAATTATAATGAAACTGATCT chr4 - 94230402 34343644 34343643 34343709 59886694 59886693 59886759 66 TCTATTTTATGAAGCTGGGAATCTTAAAAACAAACAAATTAAATCAAATAATAATGAAACTGCTCT ...:..:.:x:..:x..x:.:.:x...x...x..x........x.....x............x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 34374440 NA +3053 chr4 + 190214555 68739862 68739861 68739927 66 TATATATATAGTATATATACACACACACACGTATGTGTATGTGTGTATATATATATATATATCTCG chr4 - 94230402 61485361 61485360 61485426 32744977 32744976 32745042 66 TGCATCTACAGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTG .::..x..:..x.....:.:...:......:.::::::x.........:...:...x.....:::. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 7254501 NA +3137 chr4 + 190214555 68777195 68777194 68777251 57 AGCAGGAAAAAAAAAACAAAACCAAACACACACACACACACACACAGAAGACATTCA chr4 - 94230402 45463080 45463079 45463136 48767267 48767266 48767323 57 AACAAGCAAACAACAACAAAACCAAACACACACACACACGCGAAAAAAAAAAATACA .:..:.x...x..x.........................:.:x.x.:..:.x..x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 23314115 NA +6604 chr4 + 190214555 68784520 68784519 68784755 236 AATAATTTCTCAACTCTTTATTTTAGAAGTGTAAATAACCTTTATTTTAATATTTTTCATATTACACCTCTGTAATGCAGAGAAATTTTTATCTTC-AGGAAATGGAAAATTTTGTCCAGAGTTCATGGGAAGATGGTATTGTGGTGCTTTCTCTGGGGTCACTGTTTCAAAATGTTACAGAGGAAAAGGTTAATATCATTGCTTCAGCCCTTGCCCAGATCCCACAGAAGGTCAGT chr4 - 94230402 40939323 40939322 40939539 53290864 53290863 53291080 217 AATAATTTAT--ACTCTCTCTTCACATAATCTGTGTAACATGCATTTTGTGATTACCGTTAGTATGCCT------------------TCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAGT ........x.--.....:.x..:xx:x.:.x.:x:....x.x:.....:xx...x::xx..x..::...------------------.:.::..:.-.......x...:.x.....:.........x.....x....:........::.......x......x..x.::.x..:x.x..x::x....:::x....:.x.....:xx......::x....x.:.....:..x..x... 10M2D57M18D9M1I140M 146/216 67.6% 217/94230402 0.0% 21/216 9.7% 27845197 NA +4115 chr4 + 190214555 68786035 68786034 68786143 109 GTGTTTCTTCCAT--AGGTGTTATGGAGGTACAAAGGAAAAAAAACCATCCACATTAGGAACCAGCACTAAGCTGTATGATTGGATACCCCAGACTGACCTTCTTGGTAGG chr4 - 94230402 40939897 40939896 40940006 53290397 53290396 53290506 110 gtgttCCTTTGTTCAAGGTCCTCTGGCGATACAAAGGTAAAAAA-CCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAG .....:...:xx.--....x:.x...x.:........x......-...xxx:.x:.x..xx...:...:.:.x.x.....:...........:.x......x......::. 13M2I29M1D66M 78/108 72.2% 110/94230402 0.0% 3/108 2.8% 27846138 NA +15921 chr4 + 190214555 68786529 68786528 68787481 953 AGGTCACCCCAAACCAAAG-CTTTTATCACTCATGGTGGAATGAATGGGATCTATGAAGCTATTTACCATGACGTCCCTATGGTGGGAGTTCCCATATTTGGTGATCAGCTTGATAACATAGCTCACAGGAAGGCCAAAGGAGCAGCTGTAGAAATTAACTTCAAAACTATCACAAGCGAAGATTTACTCAGTGT-TTGAGAACAGCCATTAACAATTCCTCGTAAGTACTACTGATTGTAAAGACTGAT-----------CTAACATTGATTATGTTATACATTATG-----CCAGGAAATGTTAAATAT-----------------AATCCTGGTAGACA-------TTTTAAGGGAT-------TTTCCTCCGCAATATTAAGTCATTAATC--ACCTTG----GTATTGGAATAGTCCT--GGATATTATAGTTCATAGTGTGTCAATCTTCATGGAAATATTAGGTTTAAGTTAACAACTGGCTTACTAAACTTTT---ATTCACCTC-------------TTTGTTTTACCCCATTTTGTTAAGAATATA--------CTCTT-TTTCAGTCTCC----CCACTATATCTGTTTAATGCTATGC---AACCAAT-----AATGTTCACGTCAC---------------AACCAGCATCAATC-------TTTTACCCAACAAA-------TTTTT-------AGCTTGCATAACATATACTAC-----------------------------AGTTTATCTACCTGTCTTTTATGAAAACAAAACTACAACTTTCTAATTTCT-----------------------ATGTGTGTTTTTG-----------------------------CCTTCCAGTTACAAGGAGGATGCTATGAGATTATCAAGAATTCACCATGATCAACCCATAAAGACCCTGGATAGAGCAGTCTCCTGGATTGAGTTTGTCATGTGCCACAAAGGAGCCAAGCACCTGCGATCAGCTGCCAACGACCTCACCTGGTTCCAGCACTACTCTATAGACATGATTGGGTTCCCACGTGCCTGGGTGGCAACTGCTA----TATTCTTGGTCTCATGATGTTGTTTATTTTCCTCTCAAAAATTTAATAAAACTAGAAAGATAGAAAAGAGGGAACAGAT chr4 - 94230402 40940731 40940730 40941878 53288525 53288524 53289672 1148 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGACACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGTTTTGTTCTTCCATTAGAGTGATGCTATTTAAACCTTGGGCTGCTGATGTGAGACATGCTGACTCTTCTGGGAACTCAAAATATCGAATAGCTGGCACTCGGGTCTTAGAGAAAAAACAAATCTTTACTAAATATCAGCATCTTCTCAGAAAAGAGAGACCAGCAATTCTACCTTGTATTGCATTTTAAGATTCCTTTGAGAAAGATAGCTC----CGGAGCAACTCCCAGGATGAT------TCTGTGTTCACTGCTAGC---ATAAATTCTTTGGATACACTGCATGACAGTGCAAAGTTGTTTTATCTATTCTCTGTATGGAGCCATCACAGTTCTCTTATCTGAGCCTCCAGTATCCTTAGGTTATTGTAGCGATGTACCTGAACAGATGTAAAAAAGTTTACGTCACTTTTTTTTACAGAGTAATTGGAATCATTTGGCATAATTTTTCTTTGCAAAGATTGACTTTCTCTATTAAAGTTTGTATCTCAAGTTCTGTGCAGATAGGAATAAACTGGGCTGGTTTCAAATATTTTTATGTAATATTGACGAAAGTAAAAGCACAGCTTTCTACCTTCCTCAAAACAACAGCCAGTTGTGGAATGGGTTGTTTCAGAAATCAGTGACAAATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTG---TCAAG-TGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGA---AAAAGAAAGAATAGAT ...:..:...xx:x.....-.:..:..:...........:.:x............................:x:....x.....x..::.......:....x...:....x...:...:.x.......x..:...x........x..x..x..:x.x:.:....:x..xx.x..:.xxx.::..:..x.:::..:-x...:x....:............:x...:...x:.::.xx.:xxxx...x....-----------..x:x::..x.x....x.x....xx..-----:.x..:..:x:x......-----------------::..:.:.x::.x.-------:....xx::..-------.:.:...x.x..x:xx.:::..x:...:--......----.:...xx..x.x....--.::x.xx....:..----:.x:x...::::..x.:x:..------.:.:x...x..x:..:..---x....:.:..---..x...:x.-------------x........:.:xx.:.:xx..x.:.xx:.--------.....-.:.x..:....----:.x:..x:.:xx.x..::.x.:.:.---...x:..-----..x...:.......---------------..:::.x....x.:-------....x.::x:....-------...:.-------..:...:..xx..x:.x..::-----------------------------.:.x.x.:..:x.:x:x..x.:....::....x:...:.......x:...:-----------------------...x..xx...::-----------------------------::..:...:........:::..:.x.:.::.....x.::..x.....:..:..:..x..x...x.:.....:.....x....:.........:.........:.:...........x......:..x..:.......:x..x.:..:.......x....:..:...x:x.:..::.xx.x.x:...::::x:::...x.::..x.:....:----:.......---...x.-..:..:x.:....x..x.x:.....x.::..:::::.x.....---......::...:.... 19M1I175M1I54M11I27M5I18M17I14M7I11M7I28M2I6M4I16M2I14M4D21M6D18M3D10M3I9M13I30M8I5M1I11M4I25M3I7M5I14M15I14M7I14M7I5M7I21M29I51M23I13M29I211M4I8M3D5M1D43M3D16M 610/933 65.4% 1148/94230402 0.0% 235/933 25.2% 27845798 NA +3539 chr4 + 190214555 68791649 68791648 68791725 77 TATAGGACAAGAGTGTCCAATCTTTTACCTTCTCTGGACCACATTAGGAAAAGAAGAATCACCTTGGGCCACACACA chr4 - 94230402 50314690 50314689 50314766 43915637 43915636 43915713 77 TAAAGCACATGGGCATCCAAACTTTTGTCTTATCTGGGACACATTTAGTGAAAAGAAATTATCTTGGACCACATATA ..x..x...x.:.::.....x.....::...x.....:x......x:.x:..:.::...:.:.....:.....:.:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 18476959 NA +4135 chr4 + 190214555 68795992 68795991 68796119 128 GAACTTGTGCGTAAAAAGTAAAGGAAAAAAAAGAAGAAAGAAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAACAGAAAGAAAGAAAAGAA chr4 - 94230402 62511294 62511293 62511420 31718983 31718982 31719109 127 GGACTCTTCTCTAAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGA--GGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGAGCAGAA .:...:x.x:x.....::.....:.......:.....x...:::x.:-..xx..x..:...x:....--.:...:x....:......x....::.x...:xx..x..x..x:x......:...:x.... 47M1I19M2D60M 85/126 67.5% 127/94230402 0.0% 3/126 2.4% 6284698 NA +3121 chr4 + 190214555 68796029 68796028 68796116 88 AAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAACAGAAAGAAAGAAAA chr4 - 94230402 36858288 36858287 36858375 57372028 57372027 57372115 88 AATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA ..x.x:.....x.:xx..x.....x...::...:.........:.x..x.:xx....::....:..:::x.::x.x..::........ 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 31937741 NA +3404 chr4 + 190214555 68796039 68796038 68796120 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAACAGAAAGAAAGAAAAGAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx....::....:..::....::.x..::...::... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 31937745 NA +3044 chr4 + 190214555 68798028 68798027 68798076 49 TTTTGGTTTGTATTTTTTGTTTGTTTGTTTGTTTTTGGTTTTGAGAGGG chr4 - 94230402 41756526 41756525 41756574 52473829 52473828 52473877 49 TTTTGGTGGGCTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTCACAGAG .......xx.:x.........................x....x.x..:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 27041502 NA +8830 chr4 + 190214555 68818026 68818025 68818190 165 CAGGAAGACCCACTACATTATCTGAGACAATGAGGAAAGCTGACATATGGCTTATGCGAAACTCCTGGAATTTTAAATTTCCTCATCCATTCTTACCAAATGTTGATTTTGTTGGAGGACTCCACTGCAAACCTGCCAAACCCCTACCTAAGGTAAACATACTTT chr4 - 94230402 40937986 40937985 40938150 53292253 53292252 53292417 165 CAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTATTCTGACTTT .......:.....x...:.:.x......:...:.:.....x..x........x..xx...xx.x....:.....:.........::..x...:.:..x..:x....x..............:......x.:.....x..:..x..:..x......xx.xx..... 165M 126/165 76.4% 165/94230402 0.0% 0/165 0.0% 27880040 NA +7295 chr4 + 190214555 68822190 68822189 68822407 218 AATATTTTGTACCAATTCTTTCGGTAGTGCCTGCTGTGGTGATACTC-TTTTATGATGA-----AACATTTTTTCTTTTTCCCACAGGAAATGGAGGAGTTTGTACAGAGCTCTGGAGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAATGGTCAGTAACATGACAGAAGAAAGGGCCAACGTAATTGCAACAGCCCTTGCCAAGATCCCACAAAAGGTAAG chr4 - 94230402 40939323 40939322 40939538 53290865 53290864 53291080 216 AATAATTTATACTCTCTCTTCACATAAT-----CTGTG-TAACATGCATTTTGTGATTACCGTTAGTATGCCTTCTGCCTCCTA--GGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAG ....x...:...:xx:....:xx:..:.-----.....-.:.:.:x.-....:....x.-----.::..x::....x::...:.--......x..:..:.....x.....:..x..:...x....::.......:........x............x::...x.:..x::x.....::x:..:..:.....x.x......::x.x..x.:........x..:.. 28M5D5M1D8M1I11M5I20M2D138M 147/210 70.0% 216/94230402 0.0% 14/210 6.7% 27882867 NA +4142 chr4 + 190214555 68826408 68826407 68826501 94 AGGTTCTTTGGAGATTTGATGGGAATAAACCAGATGCCTTAGGTCTCAATACTCGACTGTACAAGTGGATACCCCAGAATGACCTTCTAGGTAA chr4 - 94230402 40939912 40939911 40940005 53290398 53290397 53290491 94 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGA ....:..:...x...x::.x..x..x........x..::.x..:::...:..:x.:x.x..::.x...........:........x..x...:. 94M 65/94 69.1% 94/94230402 0.0% 0/94 0.0% 27886496 NA +11102 chr4 + 190214555 68827327 68827326 68827554 228 AGGTCATCCAAAAACCAGAGCTTTTATAACTCATGGTGGAGCCAATGGCATCTATGAGGCAATCTACCATGGGATCCCTATGGTGGGCATTCCATTGTTTTTTGATCAACCTGATAATATTGCTCACATGAAGGCCAAGGGAGCAGCTGTTAGAGTGGACTTCAACACAATGTCGAGTACAG-ACCTGCTGAATGCACTGAAGACAGTAATTAATGATCCTTCGTGAGT chr4 - 94230402 40940731 40940730 40940958 53289445 53289444 53289672 228 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ...:.....xxx::.x.::..:..:..x...........::.......x........:..x..:........:.....x.....x..x.....xx.....x:...:..:.x...:..::............:...x..:.....x..x...:::x....:....:....x..x...-:....-.:..:x.x:.....x....x.....x.....::..:..x....... 176M1D5M1I46M 169/227 74.4% 228/94230402 0.0% 2/227 0.9% 27886596 NA +12041 chr4 + 190214555 68830568 68830567 68830886 319 TCAGTGTCGG-TATCTTTATTTTTATCCTTCAGATATAAAGAGAATATTATGAAATTATCAAGAATTCAACATGATCAACCAGTGAAGCCCCTGGATCGAGCAGTCTTCTGGATTGAATTTGTCATGCGCCACAAAGGAGCCAAACATCTTCGAGTTGCAGCCCACAACCTCACCTGGTTCCAGTACCACTCTTTGGATGTGATTGGGTTCCTGCTGGCTTGTGTGGCAACCGTGCTATTTATCATCACAAAGTGTTGTCTGTTTTGTTTCTGGAAGTTTGCTAG------AAAAGGAAAGAAGGGAAAAAGGGATTAGTTATATC chr4 - 94230402 40941567 40941566 40941892 53288511 53288510 53288836 326 TCAGTGACAAATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAAAAGAAAGAATAGATACATTGATCCCATC ......x.::-.x..:..x:...:x.::.....x..:..:..:.:.:..x.:..:.....x.::..x..x..:..:..:...:.x.....:.....:x....x..........................:...........x..:..::.xx..x:x..x..:...x.:..:.......x...........x::.......xx.x.x:...:..:.x:::....::..x.::.:xxxx..:..:x.:::x.....:..:x.......:.x:x.:..:.x..x...------...:::......:.:.x.:.x:x...::.:x:... 10M1I274M6I35M 212/319 66.5% 326/94230402 0.0% 7/319 2.2% 27889001 NA +3094 chr4 + 190214555 68870333 68870332 68870420 88 ATATATGTATATATACA----CATATATATGTGTGTGTATATATATATGTGTATGTGTGTGTATATATGTGTATGTGTGTGTATATATATGA chr4 - 94230402 39267120 39267119 39267211 54963192 54963191 54963283 92 ATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAA ..:......x.x.x.x.----.:....x........:.:x::::.::..xx.:..............x....:::.x...:.:x.....::. 17M4I71M 59/88 67.0% 92/94230402 0.0% 4/88 4.5% 29603213 NA +3025 chr4 + 190214555 68881249 68881248 68881353 105 TCCTCCCTGCAGTTCCCTGCCCCTCTTCCATATCATTTCTTTCTCCTCTTCCTCCTCCTCATCCTCCTTCTTCTTCTGAGAAAGAGAGAGAAAGAGAGAGGGAGA chr4 - 94230402 45382885 45382884 45382989 48847414 48847413 48847518 105 TCCTTCCCACACATGCTTTTCTTTCTTTCATTTGATATTGTTTCTTCCTTTTGTCTCTTCTGCTTTCTCCCTCACCTAGTAAACAGTGAGAATGAGAGATGAAGA ....:..::..xx.x.:.x:.::....:...x.x..x.:x..:::::...::x:...:..xx.:.:..:.:..x:..::x...x..x.....x......x.:... 105M 62/105 59.0% 105/94230402 0.0% 0/105 0.0% 23498364 NA +3008 chr4 + 190214555 68881506 68881505 68881569 64 TGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAAATGGGCTCTCTCTAAGT chr4 - 94230402 44905910 44905909 44905973 49324430 49324429 49324493 64 TGCTTTTTGTTGTTTTTTTTTATTTTTATTTTCTGTCCTTCAGAGAAAAGGGGATTGTTCAAGT ........x..x.........x.....x....:.x.::..:.:.....x...xx:.x.::.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 23975596 NA +3061 chr4 + 190214555 68881515 68881514 68881565 51 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAAATGGGCTCTCTCT chr4 - 94230402 55774446 55774445 55774496 38455907 38455906 38455957 51 TTTTTTTTGTTTGTTTTTTGTTTTTTTTTCTTAAACAAATTTGTTTTCTCT ........x...x......x.........:.....x....xx.:.:..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 13107069 NA +3082 chr4 + 190214555 68896985 68896984 68897050 66 TGACTAAAGATTATTCGTTAATTTTTACTTGTTTATCTGACCTTTAATTATCTTTTTTTTTTTTTT chr4 - 94230402 88358284 88358283 88358349 5872054 5872053 5872119 66 TGAAAAAGGATAAAACATTGATTTTTATATATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTT ...xx..:...x.xx.:..:.......:x.:...x.:.x.x.:......x................ 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% -19461299 -74769103 +3107 chr4 + 190214555 68911615 68911614 68911656 42 ATGTGTGTGTGTATGTGTGTATATATATATATATATATATAG chr4 - 94230402 89821281 89821280 89821322 4409081 4409080 4409122 42 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAG ..........x.x.......:...............:..:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -20909666 -73320736 +3211 chr4 + 190214555 68911620 68911619 68911665 46 TGTGTGTATGTGTGTATATATATATATATATATATAGTGATATGTA chr4 - 94230402 52579775 52579774 52579820 41650583 41650582 41650628 46 TACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTA .::....:.......................:.x..:...x..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 16331845 NA +3160 chr4 + 190214555 68996077 68996076 68996143 67 GTATATTTTACATATATATGTGTATATATATATGTGTGTGTGTATATATATGTATATATATATGTGT chr4 - 94230402 35554950 35554949 35555016 58675387 58675386 58675453 67 GTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT .....xx:..x......x..x..:.:.:.::.::.:..x.............:...:.x.x...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 33441127 NA +3096 chr4 + 190214555 68996092 68996091 68996211 120 ATATGTGTATATATATATGTGTGTGTGTATATATATGTATATATATATGTGTGTGTGTGTGTATATATATATATATGTGTATATATATATATATATCTTGGTTAATTGGTCCACTCATTA chr4 - 94230402 40224636 40224635 40224746 54005657 54005656 54005767 111 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA-------ATATAATTTGTTGATTCTG--CATTCATTA ...:x.:..:....:..xx.x.x....:.xxx:x.::x..x.x.:.:.........:...:......x...:........x:.-------.....x:...x.x.x.:x.--..:...... 83M7D19M2D9M 75/111 67.6% 111/94230402 0.0% 9/111 8.1% 28771456 NA +3027 chr4 + 190214555 68996100 68996099 68996155 56 ATATATATATGTGTGTGTGTATATATATGTATATATATATGTGTGTGTGTGTGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...::.:.:.::........x...:...:.x:...............x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 49291826 NA +3570 chr4 + 190214555 69001511 69001510 69001567 57 ATCTTATCAATGTTTTAGAGTGTGTGTGTGTGTGTGTATATATATATATATATATAT chr4 - 94230402 9151838 9151837 9151893 85078510 85078509 85078565 56 ATCTT-TCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .....-......:...xx.................:......x....x.:....... 5M1D51M 49/56 87.5% 56/94230402 0.0% 1/56 1.8% 59849673 NA +8180 chr4 + 190214555 69027874 69027873 69028559 686 GCTGTTACATTAGCTCTGGAAGTTGTGGAAAGGTGCTGGTGTGGCCCACAGCATTCAGCCATTGGATGAATGTAAAGACAATCCTGGATGAGCTTGTCCAGAGGGCGCATGAAGTGCCTGTACTGGCATTTTCAGCTTCCAT--TTGTTTGATCCCA--ACAGCCTACCTACTCTTAAACTTAAGTTTATCCTGC-----ATCTTTAACTAAAA-----------CTGAGTTGGAGGACATCATCATGCAACTAGTCAAGAGATGGGCAGCCCTTCCAAAAGGCACGTTTT---GGTCATATTTTTCACAAGTACAAGAAATCATGTGGACATTTAATGACATACTTAGAAAGTTCTGTAAGGATGTAGTTTAAAATAATAAACTTATGAAAAAACTACAAAAGTTAAAATTTGATGTTGTTCTTGCAGATGCTATTATTCCCTGTGGTGAGCTGCTGGCTGAGCTATTTAACATACCCTTCCTGTACAGTCTCCACTTCTCTGCTGGCTACACACTTGAAAAGCACAATGTAGGATTTCTGTTTCTGCCTTCCTACATACCTGTTGTTATGTCAGAATTAAGTGACCAAATGACTTTCATAGAGAGG--GTAAAAATATATGATCTATCT-------GGTTTATTTTC-----AATTTTGGTTCCAACCAAATATTTAATATGAAGAAGTGGGATCAGTTTTCCAGTGAAGTTTTACCTAAG chr4 - 94230402 40935023 40935022 40935705 53294698 53294697 53295380 683 GCTGGAATGTTGGCTTT------TGTGGGAAGGTGGTGGTCTGGCCCACCGATGCCAGTCACTGGATCAACATGAAAGTGCTGCTGGAAGAACTCATTCTCCGGGGTCACGAAGTGACTGTGCTGGTACCATCAATAAATATGCTCATTGACTACCAAGACACATCATCTCCTTTCACCTTTGAG---GTCCTGAAAGTGAACTTCACCCAAGAGACCTTCGATGCTCTGATGGTGGACTTCTTA--------GATCTCTGGATTAATGACCTCCCTAATCTGTTCCCCTGGGAGGTCATGTG----GAGGATGAAAGAAGCCATATACTCCTTTTCCAACTTGTCAAAGCACTCCTGTGATGCCTTGGTGTCAAATCATCAGCTGATAGCAAAGCTGCATCAGGCCAAGTTTGATGTTCTGATCGCTGACCCTTTAGCTGTATGTGGTGAGCTTGCAGCACAACTCCTGGAAATTCCTTTTGTCTACAGCTTCCGTTTTTCTGAGGGAAATGTGGTAGAGCGGCTGTGTGGTGGGCTCCCATCTCCACCTTCTTACGTGCCTGCTAGCACAACAGGGTTGACAGACCAGATGTCCTTTGTGGAGAGACTGTGGAATTTCTTCTTTTACCTTTCCATGGATTTATTTTTCTTAAAGTTTTGG---------------CGAGATGAA----TGGGATGGATACTACAGTAATGTCTTGGGTAAG ....xx.::..:...:.------.....:......x....x........x.xxx:...:..:.....x..::.:..::::x.x.....x..:..::.:.xxx...xx..:......x....:....:.::x...::xxx:..--.::..x:x.x...--...xx::.:..x..:.:.xx:..:..---:.....x-----.x...:.x.:..:.-----------..xx.x...x....x..x.x--------::..xxx:...x:::::..:::.:..xxx.:x.x::.x---......:.x----:x:::.:x.....::...:.:xx.x...xx::..x.:::x.::x.x.:....:.x.x:x.:..x.x....x..x.:..x..::x...:..:..xx..x:x..:.........x.xx.:..x..:x..x.x::.x:x...........xx::..xx.:..x:.x:.x..x..:..:x.x.....::...::..:....xx..xx.::::x.x..:x:..xxx:..xx..::.:.::.:..::.....:...:.:....:.:x:.::x...::..:.xx.....:...x.:..::.:.....:--..::..x.x:x.xx.:..:..-------.:........:-----.:......---------------::.x.....----......x::.x:.x....:.x..:..:xx.... 17M6D119M2I13M2I26M3D7M5I14M11I20M8D38M3I9M4D301M2I21M7I11M5I8M15D9M4D33M 374/646 57.9% 683/94230402 0.0% 77/646 11.9% 28092851 NA +7786 chr4 + 190214555 69030115 69030114 69030281 167 TTTCCTCTCAGGAAGACCCACTACCTTATCTGAGACAATGGAGAAAGCTGACATACATATGGCTTATTCAAAACTCCTGGAATTTTCAATTTCCTCATCCACTCTTACCAAATGTTGAATTTGTTGGAGGACTCCACTGCAAATCTACCAAACCCCTACCTAAGGTA chr4 - 94230402 40937978 40937977 40938140 53292263 53292262 53292425 163 TTTGCCCACAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATA----TGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTA ...x.:.x.......:.....x..x:.:.x......:....::.....x..x...----.....x..:x:..xx.x....:.....x.........::..x:..:.:..x..:x....:..............:......x.::..:.x..:..x..:..x...... 55M4D108M 120/163 73.6% 163/94230402 0.0% 4/163 2.5% 28092137 NA +6587 chr4 + 190214555 69035339 69035338 69035474 136 TCACAGGAAATGGAAGAATTTATCCAGAGCTCTGGAGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAATGATCAGCAACATGTCTGAAGAAAGGGCCAATGTAATTGCATCAGCCCTT-GCCAAGATCCACAGAA chr4 - 94230402 40939396 40939395 40939532 53290871 53290870 53291007 137 TCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAA ..x:.......x.........:.:.....:..x..:...x....::.......:........x.........:..x:....x.:x.:::x.....::x:.....:.....xxx......:-....:xx......:.. 120M1I16M 100/136 73.5% 137/94230402 0.0% 1/136 0.7% 28095943 NA +3743 chr4 + 190214555 69038225 69038224 69038324 100 AGGTTCTGTGGAGATTTGATGGGAATAGACCACATGGCTTGGGACTCAATACTCGAGTGTACAAGTGGATACCCCAGAATGACCTTCTTGGT----ATGACTCT chr4 - 94230402 40939912 40939911 40940015 53290388 53290387 53290491 104 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGAATGATTCT ....:..x...x...x::.x..x..x.:....x.x.x::.x..x::...:..:x.::.x..::.x...........:........x......----....:... 92M4I8M 69/100 69.0% 104/94230402 0.0% 4/100 4.0% 28098313 NA +8197 chr4 + 190214555 69039168 69039167 69039425 258 AGTTCATCCAAAAACCAGGGCTTTTATAACTCATGGTGGATCCAATGGCATCTACAAGGCAATCTACCATGGGATCCATATGGTGCACATTCCATTGCTTGCAGATCAACCTCATAACATTGCACACATGAAGGCCAAGGGCACAGCTATTAGATTGGACTTCCGCACAATGTCTAGTACAGACT-TGCTCAATGC-TTGAAGCCAATAATTAATGACCCTTTGTGAGTATAACAATATCTTTTCACTA----GGTGGTATTTA chr4 - 94230402 40940731 40940730 40940988 53289415 53289414 53289672 258 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGTTT-----TGTTCTTCCATTAGAGTGATGCTATTTA ..x:.....xxx::.x.:...:..:..x...........:x.......x.....::.:..x..:........:....xx.....xx:x.....xx..:....x..:..:.x.x.:...:....x.......:...x..:..x:.x..x:..::::....:...x.....x..x.x.-:.....x.-.:x.::....-x....xx..:.x.....::.::..x:......x.-----.:.::..:..:..----.:..x...... 176M1D8M1I10M1I34M5D13M4I11M 172/252 68.3% 258/94230402 0.0% 12/252 4.8% 28098437 NA +8214 chr4 + 190214555 69044229 69044228 69044579 351 AAAATAAAAGCCTTATATGGACTTGATATGCTCAAGAAA------ATAAACTTACTTTCAATTTTGGTATCTCTATGTTTATCCTTCAGATATAAAGAGAACACTATGAAGTTATCAAGAATTTGACATGATCAACCAGTAAAG-------GTCGAGCAGTCTTCTGGATTGAATTTGTCATGTGCTGTAAAGGAGCCAAGCAACCTCGGGTTGCAGCCCAGGACCTCACAGGCTTCCAGTAACACTCCTTCAACGTGATTGGGTTCCTGCTGTCCTGTGTGGCAACTGTGATATTTACCATCATGAAATGTTGTATGTTTTGTGTCTGGAAATTTGCTAGAACTGGAAAGAAGGGAAACAGAT chr4 - 94230402 40941529 40941528 40941874 53288529 53288528 53288874 346 AAAACAACAGCCAGTTGTGGAATGGGT-TGTTTCAGAAATCAGTGACAAATCTCCTTTC----------TTTCT-------TTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAAAAGAAAGAAT ....:..x....xxx.:....x.x.:.-..:.:x.....------.:...::.x.....----------.:...-------.::.....x..:..:..:.::::.x.:........x.::..x::x..:..:..:...:.x...-------::x....x........................:.::::........x.....x::xx.:x:x..x..:..xx.:..:..xx.x.x......x....x.:.x:.:..xx.x.x:...:..:.xx:.....::..x.:..:x:xx..:.::x.::.x..:..:..:........:xx:x.:....x..x...:::::x......::::..x::.. 27M1D11M6I14M10D5M7D63M7I213M 207/333 62.2% 346/94230402 0.0% 31/333 9.3% 28102700 NA +3670 chr4 + 190214555 69047980 69047979 69048110 131 TATAAACATGTGTGTATATATACACACATATATATCACTATATATACACACACACATAT---ATGTTATATATATCAC-TATATATATCACTAAATATGTAGATTTGTATTTGTATACATATATATAAATCATGT chr4 - 94230402 80747802 80747801 80747932 13482471 13482470 13482601 131 TGCAAGCATGTGTATAGCTATGCATACATACGCA--ACTATACATACATACACACACATAGCATTCCCAATCCATCACGTATATGTGTACC--AATGTAAAGAGCTGTGTGTAGATACGTATGTAAAAGATACGT .::..:.......:..xx...:..:.....:::.--......:.....:.......:..---..x::xx..x:.....-.....:.:.xx.--...:.:x...x:...:.x.:x....:...:..x..:x:.:.. 34M2D23M3I16M1I12M2D42M 86/127 67.7% 131/94230402 0.0% 8/127 6.3% -11699822 -82530580 +3049 chr4 + 190214555 69052516 69052515 69052610 95 CTAGTCCAAAGACATCAAAAAAGTTTGCTTAAAAAAAAAGAAATGGTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAGAAGGGGAGGCAAAATTT chr4 - 94230402 25064346 25064345 25064440 69165963 69165962 69166057 95 CTAGTAGAAAGACATCAAAGCTATGTATTTAAATTAGAAAATCAAGTTACATTAAAAAAAAACAAAAATAAAATAAGTCAGTGGGAGTAGTACTT .....xx............:xx:.x.::.....xx.:..:.xxx:....:x..x........x.....x....x..:xx..x..::.:.:x.:.. 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 43988170 NA +3102 chr4 + 190214555 69052542 69052541 69052594 53 GCTTAAAAAAAAAGAAATGGTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAGA chr4 - 94230402 14798984 14798983 14799036 79431367 79431366 79431419 53 GCTTAAACTCACAGAAATGACAATCTTTAAAAGGAAAAAAAAAAAAAAGAAGA .......xxx.x.......::x.....:....::..............:.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 54253558 NA +3480 chr4 + 190214555 69064003 69064002 69064118 116 AGGGGAAGATGAGATGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAA chr4 - 94230402 61334684 61334683 61334799 32895604 32895603 32895719 116 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA .:..:..x...x..xxx......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..::...:.x..:......:..:. 116M 72/116 62.1% 116/94230402 0.0% 0/116 0.0% 7729319 NA +3323 chr4 + 190214555 69064011 69064010 69064102 92 ATGAGATGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG chr4 - 94230402 36858286 36858285 36858377 57372026 57372025 57372117 92 ACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .::.x...:....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.....:.... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 32205725 NA +3247 chr4 + 190214555 69064056 69064055 69064169 114 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAACAAAATTAAAAAGAGAAAT-----AAGCTTTCC chr4 - 94230402 472365 472364 472483 93757920 93757919 93758038 119 GAAAGAGAAGAAATTGCAAAAGGAGGAAGACAGAGGAATAAAGAAACGAAAGATGAAAAAGACAGCAAGGGAAGATGAACATTCTTCAAAATTAAAGAGATGATTGTTCAAAGCTCTCC ......:.::..:xx:x...:::..:....x...:::.x.:.....x:..::.x........x..x...::.::.x...x:xxxxx..........:...x:.x.-----.....:... 105M5I9M 72/114 63.2% 119/94230402 0.0% 5/114 4.4% 68591691 NA +3159 chr4 + 190214555 69064059 69064058 69064141 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x.:x::xx:..:.:.:...:.:..x..::.x..::......... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 32205765 NA +8442 chr4 + 190214555 69067401 69067400 69067627 227 AGGTCATCCACAAACCAAAGCTTTTATAACTCATGATGGATCCAATGGAATGTATGAGAGAATCTATCATGGAATCCCTAGGGTGGGGCTTCCTTTATT-GCAGATCAACGTGACAACTTTGCTCACATGAAGGCTAAGGGGGAAGCTGTTAGATTGGACT------CAAAAACAACATAAATTACAGATTTGCTCAATGCATTAAAGGCAGTCATTAATGGCCCTACACAAAT chr4 - 94230402 40940731 40940730 40940958 53289445 53289444 53289672 228 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGACACAGA------ATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ...:.....x:x::.x..:..:..:..x.......:...:x.......:..x.....::xx..:..:...........x.x...x...x....:x.:..-..x..:..:.:.......x............:...x..:..:.xx..x...::::....:.------..xx:..:...:.:.------..:.:x.::.....x.:..x:..........:::::....:::.:. 99M1I61M6I15M6D46M 151/221 68.3% 228/94230402 0.0% 13/221 5.9% 28126670 NA +7022 chr4 + 190214555 69069617 69069616 69069890 274 ATGTCTATTTGATTTTCCTTTAGCTGTAAAAAAAAAATGTAATGTAGTTATCAATCATTTATTATGATCAGTCTCTGAAGCCATTGGACCAAAAACTCTCCTGGATTGAGTTTGTCATGCACCACAATGGAG--------------CCACCTACCAACAGTCTCACCTGGTTCCAGTACTGCTCTATGGATGTGCTGGA------------CTGCATGGCAATTGTTACTCTCTTTGTCATAATATGTTGCTTGATTATC-----AAAAGTTGTTAAGGCGAGAAAGAAAGAAAAGAGAGTACAT chr4 - 94230402 40941577 40941576 40941878 53288525 53288524 53288826 302 ATCTCCTTTCTTTCTTTTTTCAGCT--ACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAA-AAGAAAGAATAGAT ..x..:x..:xx.:..::..:....--.x..::...:...xx.:x.......x.xx..x:.::.:..:...:.xx.x.....x:.....x:.:xxx...:.........:..........::.....x....--------------...x..:.:x..x:...:.......x.......::..x:x.......x....x------------...::::..x....:.:x::..x..x.::.x.x:..:...x..x..xx.-----....xx..x..:..:x.x.......-..:.:...:..x.. 25M2D105M14I53M12I49M5I25M1D14M 179/271 66.1% 302/94230402 0.0% 34/271 12.5% 28128040 NA +6079 chr4 + 190214555 69089371 69089370 69089612 242 TACATATCACAACTTCTTCAGATTTTTATTAAAGCATAAGTAAACTATATTAT---TCTACATGATAT--------TGCATCTTTATGAT-GCAGAAATTATTTTCTTTG-----TAGGAAATGAAAGCATTTGTCCAGATCTCTGGCAAAGATGGCACTGTGGTGTTTTCTCTGGGGCCAGTTGTGCAAAACCTTATAGAAGAGAAGGCTGATCTCATTGCTTCAGACTTGGCCCAGATTCCACAGAAGGTGAGTACA chr4 - 94230402 40939287 40939286 40939542 53290861 53290860 53291116 256 TGCTTATAACACCATGATCATCTTCTTAATAAA--CTAAATAATTTATACTCTCTCTTCACATAATCTGTGTAACATGCAT-TTTGTGATTACCGTTAGTATGCCTTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAGTTCA .:.x...x...x.x.xx...xx..:...x....--x...:...x:....:.x.---.::....:..x.--------.....-...:....-:.x.xx.x...x:::.:..-----........x:...x......:....x:..x..x:..x......:......:........x...:..:.x..x:.x.....x.:x::x..:.:::x.:..x.x.....:xx..x.:.x:x....x.......:..x......x.. 33M2D18M3I12M8I5M1D8M1I19M5I144M 162/239 67.8% 256/94230402 0.0% 20/239 8.4% 28150084 NA +8381 chr4 + 190214555 69098537 69098536 69098701 165 CAGGAAGACCCACTACATTATCTGAGACAATGGGGAAAGCTGACGTATGGCTTATTCGAAACTCCTGGAATTTTCAGTTTCCATATCCACTCTTACCAAATGTTGATTTTGTTGGAGGACTCCACTGCAAACCTGCCAAACCCCTGCCTAAGGTAAACATACTTT chr4 - 94230402 40937986 40937985 40938150 53292253 53292252 53292417 165 CAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTATTCTGACTTT .......:.....x...:.:.x......:.....:.....x..x:.......x..:x...xx.x....:.....x.:.....x:::..x:..:.:..x..:x....x..............:......x.:.....x..:..x.....x......xx.xx..... 165M 123/165 74.5% 165/94230402 0.0% 0/165 0.0% 28160551 NA +7262 chr4 + 190214555 69102729 69102728 69102943 215 AGTAATTTGCACCAATTCTTTTGGTAGTGCCCGCTGTGCTAATACTC-TTTTGTGATGA-----AGCAAATTCTTT-CTTCACAGGAAATGGAAGACTTTGTACAGAGCTCTGGAGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAATGGTCAGTAACATGACAGAAGAAAGGGCCAACGTAATTGCATCAGCCCTGGCCCAGATCCCACAAAAGGTAAG chr4 - 94230402 40939323 40939322 40939538 53290865 53290864 53291080 216 AATAATTTATACTCTCTCTTCACATAAT-----CTGTG-TAACATGCATTTTGTGATTACCGTTAGTATGCCTTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAG .:......::..:xx:....:xx:..:.-----.....-...:.:x.-.........x.-----..:.x::::.:.-.:..x:.......x.....x.....x.....:..x..:...x....::.......:........x............x::...x.:..x::x.....::x:..:..:.....xxx......x:x....x.:........x..:.. 28M5D5M1D8M1I11M5I12M1I145M 147/209 70.3% 216/94230402 0.0% 13/209 6.2% 28163406 NA +4344 chr4 + 190214555 69107166 69107165 69107268 103 TTGTAACAGGTTCTGTGGAGATTTGATGGGAATAAACCAGATACCTTAGGTCTCAATACTCGGCTCTACAAGTGGATACCCCAGAATGACCTTCTAGGTAAGA chr4 - 94230402 40939905 40939904 40940007 53290396 53290395 53290498 103 TTGTTCAAGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA ....xxx....:..x...x...x::.x..x..x........x:.::.x..:::...:..:x..x.:..::.x...........:........x..x...:... 103M 71/103 68.9% 103/94230402 0.0% 0/103 0.0% 28167261 NA +11272 chr4 + 190214555 69108101 69108100 69108328 228 AGGTCATCCAAAGACCAGAGCTTTTATAACTCATGGTGGAGCCAATGGCATCTACGAGGCAATCTACCATGGGATCCCTATGGTGGGGATTCCATTGTTTGCCGATCAACCTGATAACATTGCTCACATGAAGGCCAGGGGAGCAGCTGTTAGAGTGGACTTCAACACAATGTCGAGTACAGA--CTTGCTGAATGCATTGAAGAGAGTAATTAATGATCCTTCGTGAGT chr4 - 94230402 40940731 40940730 40940958 53289445 53289444 53289672 228 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTG-ATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ...:.....xxx.:.x.::..:..:..x...........::.......x.....:..:..x..:........:.....x.....x........xx.......:..:..:.x...:...:............:...x.::.....x..x...:::x....:....:....x..x...-:.....--..x.:..-.....x....x.x...x.....::..:..x....... 176M1D6M2I7M1D37M 172/226 76.1% 228/94230402 0.0% 4/226 1.8% 28167370 NA +12821 chr4 + 190214555 69112437 69112436 69112742 306 TCTTTATTTTTATCTTTCAGATATAAAGAGAATGTTATGAAATTATCAAGAATTCAACATGATCAACCAGTGAAGCCCCTGGATCGAGCAGTCTTCTGGATTGAATTTGTCATGCGCCACAAAGGAGCTAAACACCTTCGGGTTGCAGCCCACGACCTCACCTGGTTCCAGTACCACTCTTTGGATGTGATTGGGTTCCTGCTGGTCTGTGTGGCAACTGTGATATTTATCGTCACAAAATGTTGTCTGTTTTGTTTCTGGAAGTTTGCTAGAAAAGCAAAGAAGGGAAAAAATGATTAGTTATAT chr4 - 94230402 40941580 40941579 40941882 53288521 53288520 53288823 303 TCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAA---AAAGAAAGAATAGATACAT ..:..x:...:x.:......x..:..:..:.:....x.:..:.....x.::..x..x..:..:..:...:.x.....:.....:x....x..........................:...........x..:...:.xx.:x:x..x..:...x.:..:.......x...........x::.......xx.x.x:...:..:.x:......::..x.:..:x:xx..:..:x.:::x..:..:..:x.......:.x:x.:..:.x..x...::xx:.......---...:..x..x...x..:.. 284M3D19M 209/303 69.0% 303/94230402 0.0% 3/303 1.0% 28170857 NA +3186 chr4 + 190214555 69127149 69127148 69127324 176 AAGATATCATGAAGAAAGCATGTATTGTGTGGAAGTATTTTTTTCTAATTTGTAGTGACCTACATT------TATA---TATACATGTTAAGAGTAAGGATGACCAAATGTAAATTTAA--TGAGTGGGCCAATTAACAACCATATATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 28944633 28944632 28944817 65285586 65285585 65285770 185 AATATACAATACACAAAGTGTATTGTATCTACGAGTATTTATTCTCAGAAAGTAATAGCTCAGATTAAGAATTATAAAATATGTATATTATTCCAATGGTTGG--AAAACTAGTTTCAAGATGAGTAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATA ..x...:x..:x.x....::.:.xx.:.x.:x:.......x..:::.:xxx...:.::.::.x...------....---...::..:...xxxxx.x..x..:--...xx..:x..:..--.....:.:xx..x...:...xx.x....x.:.:.:.x.........x....:.......:..x... 66M6I4M3I24M2D14M2I66M 110/174 63.2% 185/94230402 0.0% 13/174 7.5% 40182516 NA +4786 chr4 + 190214555 69132321 69132320 69132540 220 AGGTCATCTAAAAACCAAAGCTTTTATACCTCATGGTGGAGCCAATGACACCTATGAGAGGATTTACCATGGGACCCCTATGGTGGGACTTCCTTTGTTTGCAGATCAACCCGGCAAGTTTGTTCACATGAAGTCTGAG-----GGGGAAGCTGTTAAGAGTAGACTCAAAAACAATGTCAACTACA--GATTTGCTCAATGCATTAAAAGCAGTCATTAATGACTC chr4 - 94230402 36415963 36415962 36416181 57814222 57814221 57814440 219 AGGTCACCCTAACATAAAAGCTTTTCTTAGTCATGGTGGTTTGAACAGCATTTTTGAAACCATGTACCATGGGGTCCCAGTGGTGGGAATTCCCCTTTTCGGAGACCATTACGATACTATGACCCGAGTGCAGGCCAAAGGCATGGGAATATTGTTGA------ACTGGAAGAC--TGTCACTGAGAGTGAATTGTATGAAGCACTAGAAAAAGTTATTAATGATCC ......:.:x..x.:x.........x.xxx.........xx:x..:::..::.x...:.xx..x.........::...x:........x....::.x..:.x...:..x:x..::.xxx.x:::.:x:..x..x.::.:-----...:.x::....:.------...x:..:..--.....x:x.x.--..x...:x::.x...:..:..:x...:........::. 139M5I14M6D10M2D11M2I38M 132/212 62.3% 219/94230402 0.0% 15/212 7.1% 32716358 NA +10867 chr4 + 190214555 69134524 69134523 69134819 296 ATGTCTATTTGATTTTCCTTTAGCTGTAAAGAGAACGTTATATGGTTATCCATCATTCATTATGATCAGCTTATGAAGCCCATGGACCAAACAGTCTTCTGGATCAAGTTTGTCATGCGCCACAAAGGAGCCAAATACTTGCTGCCACCTGCGAACAACCTCACCTGGCTCCAGTACTGCTCTCTGGTTGTGCTGGC------------CTGCGAGGCAGTTTTTACTCTCTTTGTCATAATATGTTGCTTGTTTGATTATCAAAAGTTTGTTAAGACCAGAAAGAAAAAAAAGAGAGAGTAGCACTG chr4 - 94230402 40941577 40941576 40941884 53288519 53288518 53288826 308 ATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAAAAGAAAGAATAGATACATTG ..x..:x..:xx.:..::..:....::..:..:.::...x..x:........xx..x..::.:..:....:x..x.....:x.....x:.:.x...........::.:...........:...........x..::.....xx:...x....xx..x.:..:......:x.......::..x:....x...x.....------------...:.x:..x:..x:.:x::..x..x.::.x.x:..:...x.....x::.:.x:...:.x..x..:.::..x.........:..:::.x..xx:..:.. 197M12I99M 195/296 65.9% 308/94230402 0.0% 12/296 4.1% 28192947 NA +3539 chr4 + 190214555 69146206 69146205 69146345 140 TTATCTTGTGGTTTAGCTTGTGGAATGCATACATTTTCTTCCTCA-GGTTTTATGGAGATTCCAAGGAAAGAAACCAACTACATTAGGAAGCAATACTCAGCTCTATGTTTGGATATCCCAGAGTGATCTTCATGGTAAGA chr4 - 94230402 40939877 40939876 40940007 53290396 53290395 53290526 131 ttatcttagtgtttatctta----------gtgttCCTTTGTTCAAGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA .......:xx.....x...:----------:::..:::..x:...-...::.x...x...x.x....x..:......:xx:.x:.x..xxx...:..:x:.x.:....x:......:....:.:...:..x.x....:... 20M10D15M1I95M 84/130 64.6% 131/94230402 0.0% 11/130 8.5% 28206329 NA +13768 chr4 + 190214555 69146725 69146724 69147683 959 AGGTCATCCCCAAACCCAAGCTTTTATCACTCAAGGTGATATAAATGAGATACATGAAGCTATTTACCATGCAGTCCCTATGGTGGGAGTTCCCATGTCTGGTGATCAGCCTGATAAGACCTCTCATATGAAAGCCAAATAAGCAACTGTGCAGGTGAACATGAATACAATTACACGGGCAGAAT-TGCTTAGGTCTTTGAGAACAGTTGCTAATGATCCTTTGTAAGT---ATTACTGCCTTAAAAGGCT--TATCTA--CCTACCATTGATTATGTTATAATCATACTAG---------------AAAATGTCAG-------------GGGCCATACCTGAAGACTATTTAAAAGATATTTCCCCTCAATCTCAGGTCATTCATCATCTTACCATTGCAAGTCCTGGAAATGGTAA--TGCATAGAGTGTCAATCTTCCTTCTTGGAAACACTAGATTTAAATTAAGGACCAG-CTTACTAAGTATTT--------------TTCTATGTCTTCA---------------------TTTTACCCATTCTGCTAAGAATATGCTTCTTTTTCAATTTCCCCACTGTAGCTCTTCAGT-----------------GCTATGCAACC----------AACAAAGTTAGTATCAC---------------AACAAGGATCAATC--------TTTTATTCAACAAGGTT-----------TTGGA--TTGTATAATATATGCTATG-----------------------GTTTACCTACTTCTTTTTAAT------GAACGCAAAA-CAAAACTCTCTGTTTTCC-----------------------ATGTGTG-----------------------------CTCTTGTTTTCCAGTTATAAACAGAATGCTATGAGATTATCAAGAATTCACCATGATCAACCTGTAAAGCCCCTGGATTGAGCAGTTTTCTGGATCGAGTTTGTCATGCGCCACAAAGGAGCCAAGCACCCTTGGCTAGCTGCCCACAACCTCTCCTAGTACCAGTGCCACTCTTTGGATGTGATTGTGTTTTGGCTGGTCTCCGTAGCAATTACTATATTGTTGGTCACAAAACTTTGTTTGTTTTTCTGTTGAAAATTTGGTAAAATAGGAAAGAAGAAAAAGAGGAAATAGAT chr4 - 94230402 40940731 40940730 40941878 53288525 53288524 53289672 1148 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACG-ACACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGTTTTGTTCTTCCATTAGAGTGATGCTATTTAAACCTTGGGCTGCTGATGTGAGA--CATGCTGACTCTTCTGGGAACTCAAAATATCGAATAGCTGGCACTCGGGTCTTA---GAGAA------AAAACAAATCTTTACTAAATATCAG------CATCTTCTCAGAAAAGAGAGACC-AGCAATTCTACCTTGTATTGCATTTTAAGATTCCTT--TGAGAAAGATAGCTCCGGAGCAACTCCCAGGATGATTCTGTGTTCACTGCTAGCATAAATTCTTTGGATACACTGCATGACAGTGCAAAGTTGTTTTATCTATTCTCT-----GTATGGAGCCATCACAGTTCTCTTATCTGAGC-CTCCAGTATCCTTAGGTTATTGTAGCGATGTACCTGAACAGATGTAAAAAAGTTTACGTCACTTTTTTTTACAGAGTAATTGGAATCATTTGGCATAATTTTTCTTTGCAAAGATTGACTTTCTCTATTAAAGTTTGTATCTCAAGTTCTGTGCAGATAGGAATAAACTGGGCTGGTTTCAAATATTTTTATGTAATATTGACGAAAGTAAAAGCACAGCTTTCTACCTTCCTCAAAACAACAGCCAGTTGTGGAATGGGTTGTTTCAGAAATCAGTGACAAATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGT---CACAAAGAAAAAGAAAGAATAGAT ...:......:x::.xx.:..:..:..:.....x....:x.:x....:...x:..................x.:....x.....x..::.........:..x...:....x...:..x:::x....:....::..x...x:...x:.x..xx..x..:.:x.x.::...x.x..:-:x:......-.:x..::xx.xx...:x.....:::...::..:..x:..:...---:..x:.x.x...:.:x.x.--...:..--...xxx::..x.x....x.x.--...:..::---------------.....:..::-------------...:.x..---..::.------....x.x..:.::x..x...x....------....x...:.xx.xx.x:..x..-:.x...xx..x--..:..x.x:.x.:..xx......--..::..x:x...x.::::.x:..xxx....-x.x.:.xx..:..:--------------....x..xx.x..---------------------.....:.:.....x:-----:....xxx.:x.:x..:..::.::.::xx...-..:....-----------------..x...:.x.:----------..x......x:::....---------------..:x:.:....x.:--------....x..::xx...:..-----------..::.--......xx:.x:.x..:..-----------------------x..:.xx..:..:.x.x....------...x.:....-..x.:..:...:::....-----------------------...x..x-----------------------------..:.:x....:...:..:..:x.:.:..:.x.:.::.....x.::..x.....:..:..:..x:.x.....:.....:x....x..:........:..:...........:...........x......::xx.:.:......:...x.:..:x...:........:.....x::.......xx.x.::..:.x.:.x:...x:.:...x...:..:xx..xx.xx.:::x..::x:..:x......x....x......x.....:::.---x.x:..........:::....... 175M1D9M1I43M3I19M2I6M2I21M2D8M15I10M13I8M3D5M6D25M6D23M1D11M2I23M2D30M1I14M14I13M21I15M5D32M1D7M17I11M10I17M15I14M8I17M11I5M2I19M23I21M6I10M1I18M23I7M29I269M3D24M 602/929 64.8% 1148/94230402 0.0% 249/929 26.8% 28205994 NA +3071 chr4 + 190214555 69191247 69191246 69191296 50 CAAATGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCACAAGA chr4 - 94230402 26405343 26405342 26405392 67825011 67825010 67825060 50 CAGATGGGAAAAGAATAAAAACGAACAAACAAAAAAAAAAATCCACAAAA ..:....x....:..x.....x:..x...x..................:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 42785904 NA +3187 chr4 + 190214555 69191257 69191256 69191305 49 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCACAAGAGAAAAATAA chr4 - 94230402 21208658 21208657 21208706 73021697 73021696 73021745 49 AAAAAACAAAAAACAAACAAACAAAAAAAAACCCACAGAAGAAAAACAA ......x......x...x...x.........:.....::.......:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 47982599 NA +3313 chr4 + 190214555 69205326 69205325 69205381 56 ACAATTCTACCATATTCTTTTCCCCTAGGACTGGAAAATAAATACAAAGAAGTTCT chr4 - 94230402 64821209 64821208 64821264 29409139 29409138 29409194 56 ACAATTTTTCTATTTTCTTTTTCTCTAACACTAGAAAATAAGTGTAAAGAAATTCT ......:.x.:..x.......:.:...:x...:........:.::......:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 4384117 NA +5733 chr4 + 190214555 69247879 69247878 69248100 222 TCTTTATTTTAGAAATGTAAGTAACCTTTACTTT----------AATCTTTGTTATATTACCCCTCTGTAAT----GCAGATAAATTTTTATCTTCC--GGAAATGGAAAATGTTGTCCAGAGTTCAGGGGAAGATGATATTGGGTTGTTTTCTCTGGGGTCACTGTTTCCAAATGTTATAGAAGAAAAGGCTAATATCATTGCTTCAGCCCTTGCCCAGATCCCACAGAAGGTCAGT chr4 - 94230402 40939304 40939303 40939539 53290864 53290863 53291099 236 TCATCTTCTTAATAAACTAAATAATTTATACTCTCTCTTCACATAATCTGTGTAACATG--CATTTTGTGATTACCGTTAGTATGCCTTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAGT ..x.:x.:...:x..xx...:...::.x....:.----------.....x...x.:..x--.x:.:...:..----.:x::..x:::..:xx.:...--......x...:.xx....:...............x...::....x.x.:........x......x..x.::xx..:x.x.:x::x....:::x....:.x.....:xx......::x....x.:.....:..x..x... 34M10I15M2D11M4I21M2I139M 144/220 65.5% 236/94230402 0.0% 18/220 8.2% 28308575 NA +3769 chr4 + 190214555 69249377 69249376 69249486 110 GTGTTTCTTCCAT--AGGTGTTATAGAGATACAATGGAAAAAAAACCATCCACATTAGGAACCAATACTCGGCTGTATGATGGGATACCCCAGAATGATCTTCTTGGTAGGA chr4 - 94230402 40939897 40939896 40940007 53290396 53290395 53290506 111 gtgttCCTTTGTTCAAGGTCCTCTGGCGATACAAAGGTAAAAAA-CCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA .....:...:xx.--....x:.x.:.x.......x..x......-...xxx:.x:.x..xx....:..:x..x.x.....:x..........:.....:..x......::.. 13M2I29M1D67M 77/109 70.6% 111/94230402 0.0% 3/109 2.8% 28309480 NA +15409 chr4 + 190214555 69249835 69249834 69250820 986 GTATCTCACCATTTCTCATCCATTTTGCATACTAGGTGACCTCAAACCAAAGCTTTTATCGCTCATGGAGGAATGAATGTGATCTATGAAGCTATTTACCATGAGGTCCCTATGGTGGGAGTTCCCCTATTTGGTGATCAGCTTGATGCCATAGCTCACATGAAGGCCAAAGGAGCAGCTGTAGAAATAAACTTCAAAACTATGACAAGCAAAGATTTACTCAGGGTTTTGAGAACAGTCATTAACGATTCCTCGTAAGTACTACTGCTTGTAAAGACTGAT-----------CTAACATCGATTATATTATACATTATG-----TCGGAAAATGTTAAATATCATGCTGGTAGATATTTTAAGGGATTTTTCCCTTCGATATTAAGTCATTCATCACCTTGGTATTGGAATAGTTCTGGAAATTATAGTTCATAGAGTGTCAATCTT------CATGGAAATATTAAGTTTAAATTAATAACT---------------GGCTTATTCAGGTTTTACT-----CACA---TCTTTG-CTTTACCCCATTTTGTTAAAAATGTACTCTTTTTCACTCTCCG--------CATTATATCTGTTTAATC------------------------------CTATGCAACC----------AATAATGTTCATGTCAC---------------AACCGGAATCAATC-------TTTTATTCAACAAGTTTTGGCTTGCATAACATATACTACAGTTTATCTACC------TGT---------------------------------CTTTTATG-----------AAAACAAAACTACAACTTTCTAAGTTCT-----------------------ATGTGTGTTTTTG-----------------------------CCTTCCAGTTATAAAGAGGATGCTATGAGATTATCAAGAATTCACCATGATCAGCCTGTGAAGCCCCTGGATCAGGCAGACTTCTGGATCGAGTTTGTCATGTGCCACAAAGGAGCCAAGCACCTGTGGTCAGCTGCCCATGACCTCACCTGGTTCCAGCACTACTCTATAGATGTGATTGGGTTCCTGCTGGCCTGTGTGTCAACTGCTA----TATTCTTGGCCACAAGATGTTGTTTATTTTCCTGTCAAAAATTTAATAAAACTAGAAAGATAGAAAAGAGGGAATAGGT chr4 - 94230402 40940710 40940709 40941878 53288525 53288524 53289693 1169 GTGTCTCACCTT-------CCTTGTTGCAGGCCAT----CCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGACACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGTTTTGTTCTTCCATTAGAGTGATGCTATTTAAACCTTGGGCTGCTGATGTGAGACATGCTGACTCTTCTGGGAACTCAAAATATCG----AATAGCT-------GGCACTCGGGTCTTAGAGAAAAAACAAATCTTTAC-TAAATATCAGCATCTTCTCAGAAAAGAGAGACCAGCAATT--CTACCTTGTATTGCATTTTAAGATTCCTTTGAGAAAGATAGCTCCGGAGCAACTCCCAGGATGATTCTGTGTTCACTGCTAGCATAAATTCTTTGGATACACTGCATGACAGTGCAAA-GTTGTTTTATCTATTCTCTGTATGGAGCCATCACAGTTCTCTTATCTGAGCCTCCAGTATCCTTAGGTTATTGTAGCGATGTACCTGAACAGATGTAAAAAAGTTTACGTCACTTTTTTTTACAGAGTAATTGGAATCATTTGGCATAATTTTTCTTTGCAAAGATTGACTTTC------TCTATTAAAGTTTGTATCTCAAGTTCTGTGCAGATAGGAATAAACTGGGCTGGTTTCAAATATTTTTATGTAATATTGACGAAAGTAAAAGCACAGCTTTCTACCTTCCTCAAAACAACAGCCAGTTGTGGAATGGGTTGTTTCAGAAATCAGTGACAAATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTC----AAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGA---AAAAGAAAGAATAGAT ..:.......x.-------..x.x.....x:.:.x----..::x::.x..:..:..:..::.......x..:.:x....x.......................:::....x.....x..::.....x.:....x...:....x...::x.:.x..........:...x........x..x..x..:x.::.:....:x..xx....:.xxx.::..:..x.:::x.:xx...:x............:....:x...:...x:.::.x:.:xxxx...x....-----------..x:x:::.x.x..:.x.x....xx..-----..x.::..:x:x.......:----::...x.-------..x.:.:xxx:...x..x.xx..::x.x..x.:..-.x::...::.x..xx.::::....xx.x..x:..xx:.x.--.x.:...------...xxx..x...xxx..x.:.xx:...:..---------------..x.x....x.xx..:...-----..:.---......-x.x:..:x...xx::x.:x...-..xx.:..x.::.:....:.--------...:.:.x:.x.:.x...------------------------------.x...:.x.:----------..x..x...:.:.....---------------..::.......x.:-------....x:.:x:...:xx...:...x.------.x..:..x.....:.x.x:.------...---------------------------------:.......-----------...::....x:...:.......xx...:-----------------------...x..xx...::-----------------------------::..:...:..:..:..:::..:.x.:.::.....x.::..x.....:..:.....x:.x.....:.....:x::..x.x.........:..:.........:.:...........x......:..x.::.......:..:x.:..:.......x....:..:...x:x.:.....xx.x.x:...:..:.x::.....::x.x.:....:----:.......x.----.::..:..:x.:....x....x:.....x.::..:::::.x.....---......::......:. 12M7D16M4D243M11I27M5I20M4D7M7D35M1D40M2D7M6I30M15I19M5I4M3I6M1I22M1D20M8I18M30I10M10I17M15I14M7I25M6D20M6I3M33I8M11I28M23I13M29I211M4I10M4D46M3D16M 615/947 64.9% 1169/94230402 0.0% 261/947 27.6% 28309125 NA +3724 chr4 + 190214555 69254971 69254970 69255043 73 CAAGACTGTCCAATCTTTTGCCTTCCCTGGACCATATTGGGAAAAGAAGAATTGCCTTGGACCACACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ..:....:.....:...:..:........::...:.x..:.x:..x.:.....:...x..:.::..:x...:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 59369114 NA +3025 chr4 + 190214555 69261561 69261560 69261631 71 TCTTCCTTTCCTTCTTTCTTTCTCTTTCTTTCTTGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988826 18988825 18988896 75241507 75241506 75241577 71 TTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .:..x.....::.xx.:..x.:.:..........x..:.........x...x.xx...:.x:..:..x... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 50272735 NA +6739 chr4 + 190214555 69280534 69280533 69281141 608 ATACATCTCGGTTGTTACTTT------AGCTCTGGGAGT----------TGTGGAAAGGTGCTGGTGTGGACCGGTGAATACAGCCATTGGATGAATATGAAGACAATCCTGAAAGAGCTTGTTCAGAGAGGTCATGAGGTGACTGTACTGGCATCTTCAGCTTCCATTCTTTTTGATCCCAATGACGCATTCACTCTTAAACTCGAAGTTTAT-------CCT---------ACATCTTTAACTAAAACTGAATTTGAGAATATCATCATGCAACAGGTTAAGAGATGGTCAGACA--TTCAAAAAGATAGCTTTTGGTTATATTTTTCACAAGAACAAGAAATCCTGTGGGAA---TTTCATGACATATTTAGAAACTTCTGTAAAGATGTAGTTTCAAATAAGAAAGTTATGAAAAAACTACAAGAGTCAAGATTTGACATCATTTTTGCAGATGCTTTTTTTCCTTGTGGTGAGCTGCTGGCTGCGCTACTTAACA-TACCGTTTGTGTACAGTCTCTGCTTCACTCCTGGCTACACAATTGAAAGGCACAGTGGAGGACTGATTTTCCCTCCTTCCTACATACCTGTTGTTATGTCAAAATTAAGTGATCAAATGACTTTCATGGAGAGGGTAAAAAACAT chr4 - 94230402 40929467 40929466 40930096 53300307 53300306 53300936 630 ATGCCTCCAGCTTCTTGCTTTCCATGTGGCTCTGGTAGCACCTGTCTTCTGTGGGAATGTGCTGGTCTGGCCAACGGAGGGCAGCCACTGGCTAAACGTGAAGATGGTTATTCAGGAGCTCATCCGCCGTGGGCACAGCGTTACCATCCTGGTGTCCAATGCTTCCCTCTTCATTCAGCCAAAGGCTGAGACCACCGAGAAGTTTGAGGTCTATAACGTGCCCTTCAAGAAAGACACCATTG--CAAACCTGA--TTGAAGACATCATGACGTTATGGCTGAACAACAGGCCA-ACAGCTTCGAC-------CTTCTGGC---AGTTTTACAAGGAGCTGGGGAAACTGTCCAAAAGCTGGCACCAGGTCAACAGGCAGATGTGCGATGCAGTGCTGACCAACCAGGAGCTGATGGCCCATCTGCAGGGCTCTGGCTACGACCTGCTGCTGTCAGACCCAGTGACTCCATGCGGGGACCTCGTAGCT-CTCAAGCTGGCACTGCCTTTTGTGTACTCCCTGCGCTTCTCTCCAGCCTCGACTGTTGAGAGGCACTGTGGCAAGATCCCAGCCCCACCATCCTACACACCTGCGGCCCTGTCTGAGCTCACTGACCACATGTCCTTTGGCGAGAGAATTAAAAATAT ..:.x..:x.x..x..:....------:.......x..:----------.....:..x........x...x.x:xx..:x:......:...x.:..::......:::.:x.xx.:.....::.:.:xx.x..x..:::x..x..::.x....::..:xxx......x.::.:x..x.x..x..x.x:.x:x:...:xxx..::.:..:..:...-------...---------...:.x..:--:...x....--....::.:.....x.:.:x.::.x.x..x.:xx..:..-...--...:.x-------...:...:---.x....xxx.:..:.x:.::.xx....xx:..---.xx..:x.x:.xxx:..:x.xx.x..::.x.xx..:x.xx.x..:x..:.:x.x...:xxx.x..:..:.:x..x:.x.x:...x.xx.x:.xx....:x.xx.xx:...x..:..x..x..xx.:...-.x.x.x:.::..-.:..x.........xx:..x:.....x....x.x..xx..x:....:......x....x:::x.xx:xx:...x..x.......:.....:x.::x....x:.::.x.x...:..x...x.:..::xx.....::.x.....:.. 21M6I12M10I165M7I3M9I9M2D9M2D38M1D3M2I6M7D8M3D32M3I129M1D12M1I145M 347/592 58.6% 630/94230402 0.0% 54/592 9.1% 28351067 NA +8673 chr4 + 190214555 69282511 69282510 69282675 165 CAGGAAGACCCACTACCTTATTTGAGACAATGGGGAAAGCTGACATATGGCTTATGCGAAACTCCTGGAGTTTTCAATTTCCTCATCCATTCTTACCAAACATTGATTTTGTTGGAGGACTCCACTGCAAACCTGCCAAACCCCTACCTAAGGTAAACATACTTT chr4 - 94230402 40937986 40937985 40938150 53292253 53292252 53292417 165 CAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTATTCTGACTTT .......:.....x..x:.:.x......:.....:.....x..x........x..xx...xx.x....::....x.........::..x...:.:..x...x....x..............:......x.:.....x..:..x..:..x......xx.xx..... 165M 126/165 76.4% 165/94230402 0.0% 0/165 0.0% 28344525 NA +6702 chr4 + 190214555 69286739 69286738 69286888 150 TTTTTTTTCACAGGAAATGGAGGAATTTGTACAGAGCTCTGGTGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAGTGATAAGTAACATGACAGCAGAAAGGGCCAACGTAATTGCAACAGCCCTTGCCAAGATCCCACAAAAGGTAAG chr4 - 94230402 40939389 40939388 40939538 53290865 53290864 53291014 150 TTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAG ..:.x::..x:.......x..:........x.....:..x..x...x....::.......:........x......:..:.xx::...x.:..x:xx.....::x:..:..:.....x.x......::x.x..x.:........x..:.. 150M 105/150 70.0% 150/94230402 0.0% 0/150 0.0% 28347350 NA +4301 chr4 + 190214555 69289663 69289662 69289756 94 AGGTTCTGTGGAGATTTGATGGGAATAAACCAGATGCCTTAGGTCTCAATACTCGGCTGTATAAGTGGATACCCCAGAATGACCTTCTAGGTAA chr4 - 94230402 40939912 40939911 40940005 53290398 53290397 53290491 94 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGA ....:..x...x...x::.x..x..x........x..::.x..:::...:..:x..x.x...:.x...........:........x..x...:. 94M 67/94 71.3% 94/94230402 0.0% 0/94 0.0% 28349751 NA +10731 chr4 + 190214555 69290590 69290589 69290817 228 AGGTCTTCCAAAAACCAGAGCTTTTATAACTCATGGTGGAGCCAATGGCATCTATGAGGCAATCTACCATGGGATCCCTATGGTAGGCATTCCATTGTTTTGGGATCAACCTGATAACATTGCTCACATGAAGGCCAAGGGAGCAGCTGTTAGACTGGACTTCCACACAATGTCGAGTACAG-ACCTGCTGAATGCACTGAAGACAGTAATTAATGATCCTTCGTGAGT chr4 - 94230402 40940731 40940730 40940958 53289445 53289444 53289672 228 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ...:.x...xxx::.x.::..:..:..x...........::.......x........:..x..:........:.....x.....x..x.....xx.....xxx..:..:.x...:...:............:...x..:.....x..x...:::.....:...x:....x..x...-:....-.:..:x.x:.....x....x.....x.....::..:..x....... 176M1D5M1I46M 168/227 74.0% 228/94230402 0.0% 2/227 0.9% 28349859 NA +11085 chr4 + 190214555 69294510 69294509 69294810 301 TCTTTATTTTTATCCTTCAGATATAAAGAGAATGTTATGAAATTATCAATAATTCAACATGATCAACCAGTAAAGCCCCTGCATCGAGCAGTCTTCTGGATTGAATTTGTGATGTGCCACAAAGGAGCCAAACACCTTCGAGTTGCAGCCCGTGACCTCACCTGGTTCCAGTACCACTCTTTGGATGTGATTGGGTTTCTGCTGGCCTGTGTGGCAACTGTGATATTTGTCGTCACAAAGTTTTGTCTGTTTTGTTTCTGGAAGTTTGCTAG------AAAAGGGAAGAAGGGAAAAAGAGATTAGT chr4 - 94230402 40941580 40941579 40941886 53288517 53288516 53288823 307 TCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAAAAGAAAGAATAGATACATTGAT ..:..x:...:x.::.....x..:..:..:.:....x.:..:.....x.x:..x..x..:..:..:...:.x.....:...x.:x....x....................x...:.:...........x..:...:.xx..x:x..x..:.::x.:..:.......x...........x::.......xx.x.x:..::..:.x::.....::..x.:..:x:xx..::.:x.:::x....x:..:x.......:.x:x.:..:.x..x...------...::::.....:.:.x.:.x.x...::. 272M6I29M 197/301 65.4% 307/94230402 0.0% 6/301 2.0% 28352930 NA +3071 chr4 + 190214555 69322363 69322362 69322409 47 TTTTTGTTGTTGTTGTTGTTGTTTTATTTTTTTTTGTCCCTGTTGAA chr4 - 94230402 28153549 28153548 28153595 66076808 66076807 66076854 47 TTTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTTCTGTTCATGTAGAA .....x..................xx.......:...:.x...x... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 41168814 NA +5285 chr4 + 190214555 69355309 69355308 69355455 147 TTTTATCTTCCAG-AAATGGAAAATGTTGTCCAGAGTTCAGGGGAAGAGGATATTGGGTTCTTTTCTCTGAGGTCACTGTTTCAAAACGTTACAGAAGAAAAGGCTAAT---ATTGCTTCAGCCCTTGCCCAGATCCCACAGAAGGTCAGT chr4 - 94230402 40939389 40939388 40939539 53290864 53290863 53291014 151 TTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAGT ..:.::..:.:..-....x...:.xx....:...............x.x.::....x.x.x........x:.....x..x.::.x...x.x..x::x....:::x....---.....:xx......::x....x.:.....:..x..x... 13M1I95M3I39M 102/147 69.4% 151/94230402 0.0% 4/147 2.7% 28415920 NA +3741 chr4 + 190214555 69356746 69356745 69356854 109 GTGTTTCTTCCAT--AGGTGTTATAGAGATACAATGGGAAAAAACTATCCACATTAGGAACCAATACTCGACTGTCTGATGGGATACCCCAGAATGATCTTCTTGGTAGGA chr4 - 94230402 40939897 40939896 40940007 53290396 53290395 53290506 111 gtgttCCTTTGTTCAAGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA .....:...:xx.--....x:.x.:.x.......x..x.......:.xxx:.x:.x..xx....:..:x.:x.x.x...:x..........:.....:..x......::.. 13M2I96M 74/109 67.9% 111/94230402 0.0% 2/109 1.8% 28416849 NA +15872 chr4 + 190214555 69357251 69357250 69358181 931 AAAGCTTTTATCACTCATGGAGGAATGAATGGGATCTATGAAGCTATTTACCATGAGGTCCCTATGGTGGGAGTTCCCCTATTTGGTGATCACAATGATGCCATAGCTCACATGAAGGCCAAAGGAGCAGCTGTAGAAATAAACTTCAAAACTATGACAAGCAAAGATGTACTCAGGGCTTTGAGAACAGTCATTAACGATTCCTCATAAGTACTACTGCTTGTAAAGACTGA------TCTAACATTGG-----TTATATTATACATTATG-----TCGGAAAATGTTAAATATCA---TGCTGGTAGAC--ATTTTAAGG--------GATTTTTCCCTTCAATATTA------------------------AGTCATTCATCACCTTAGTATTGGA-------ATAGTTCTGGAAATTATAGTTCATAGAGTGTCAATCTTCATGGAAATATTAAGTTAACAACTGGCTTG----CTCAGGTTTTATT---------CACATCTTTGCTTTACCCCATTTTGTTAAAAATATA--------CTCTT-TTTCAGTCTCC----CCACTATATCTGTTTAATGCTATGC---AACCAAT-----AACGTTCATGTCAC---------------AACCAGAATCAATC-------TTTTACTCAACAAGTTTTGGCTTGCATAACATATACTACAGTTTATCTA------CCTGT---------------------------------CTTTTAT-----------GAAAACAAAATTACAACTTTCTAAGTTCT-----------------------ATGTG-----------------------------TGTTTTTGCCTTCCAGTTATAAAGAGTATGCTATGAGTTTATCAGGGATTCACCATGATCAACCTGTGAAGCCCCT-GATCGAGCAAACTTCTGGATCGAGTTTGTCATGTGCCACAAAGGAGCCAAGCACCTGTGATCAGCTGCCCACAGCCTCACCTGGTTCCAGCACTACTCTATAGATGTGATTGGGTTCCTGCTGGCCTGTGTGGCAACTGCTATATTCTTGGTCACAAGATGTTGTTTATTTTCCTGTCAAAAATTTAATAACACTAGAAAGATAGAAAAGAGGGAATAGAT chr4 - 94230402 40940747 40940746 40941878 53288525 53288524 53289656 1132 AAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGACACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGTTTTGTTCTTCCATTAGAGTGATGCTATTTAAACCTTGGGCTGCTGATGTGAGACATGCTGACTCTTCTGGGAACTCAAAATATCGAATAGCTGGCACTCGGGTCTTAGAGAAAAAACAAATCTTTAC--TAAATATCAGCATCTTCTCAGAAAAGAGAGACCAGCAATTC--TACCTT-GTATTGCATTTTAAGATTCCTTTGAGAAAGATAGCTC-CGGAG---CAACTCCCAGGATGATTCTGTGTTCACTGCTAGCATAAATTCTTTGGATACACTGCATGACAGTGCAAAGTTGTTTTATCTATTCTCTGTATGGAGCCATCACAGTTCTCTTATCTGAGCCTCCAGTATCCTTAGGTTATTGTAGCGATGTACCTGAACAGATGTAAAAAAGTTTACGTCACTTTTTTTTACAGAGTAATTGGAATCATTTGGCATAATTTTTCTTTGCAAAGATTGACTTTC------TCTATTAAAGTTTGTATCTCAAGTTCTGTGCAGATAGGAATAAACTGGGCTGGTTTCAAATATTTTTATGTAATATTGACGAAAGTAAAAGCACAGCTTTCTACCTTCCTCAAAACAACAGCCAGTTGTGGAATGGGTTGTTTCAGAAATCAGTGACAAATCTCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGA---AAAAGAAAGAATAGAT ..:..:..:..:........x..:.:x............................:::....x.....x..::.....x.:....x...:..xx....::x.:.x..........:...x........x..x..x..:x.::.:....:x..xx....:.xxx.::..x..x.:::x..xx...:x............:....:x.:.:...x:.::.x:.:xxxx...x...------.:x...x....-----.x..:.x.x....xx..-----..x.::..:x:x.......:---x.....:.xx.--:.:...::.--------:..:...x.--.x.....:.------------------------..:x....--:.....-......x.-------..xx:.:..::..xx....:..-::...---...::::..x.:x:..x:.:x...x..x:..:..x.:----..:x..x.x:.:.---------::..xxx...:....:.:xx.:.:xx..x::.xx:.--------.....-.:.x..:....----:.x:..x:.:xx.x..::.x.:.:.---...x:..-----..x...:.:.....---------------..:::......x.:-------....x..:x:...:xx...:...x.------.x..:..x.....:.x.x------:....---------------------------------:......-----------....::....x:...:.......xx...:-----------------------...x.-----------------------------.x:...:x::..:...:..:..:..:x:..:.x.:.:x.....x::...x.....:..:..:..x:.x.....:..-..:x....x:x.........:..:.........:.:...........x......:..x..:.......:...x::..:.......x....:..:...x:x.:.....xx.x.x:...:..:.x::.....::..x.:....:xx...x.xx.:::x.::..:..:x.:....x....x:.....x.::..:x:::.x.....---......::........ 233M6I11M5I17M5I20M3I11M2I9M8I9M2D9M24I8M2D6M1D8M7I22M1D5M3D37M4I13M9I36M8I5M1I11M4I25M3I7M5I14M15I14M7I25M6D18M6I5M33I7M11I29M23I5M29I76M1I202M3D16M 600/913 65.7% 1132/94230402 0.0% 237/913 26.0% 28416504 NA +3031 chr4 + 190214555 69370156 69370155 69370236 81 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTATCTGTCTCTCTGTTATTCCCATC chr4 - 94230402 37303286 37303285 37303366 56927037 56927036 56927117 81 TTTCAGTCTGTTGCTTTCTCCTTCTGTCTTTCTTTCATTCTTCTCACAAAACTTTCCATTTGTTTTCTTGGTATTTTCATC ....xx...x.:x:.:.:..:....x..........x.....:::x.xxxx.....:..:...:.:::..x....::.... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 32066870 NA +3933 chr4 + 190214555 69371303 69371302 69371388 86 TATTACATACATA-TATTACATATATA-TAATATATATATAAATATATATATTATATATATTATATATAATATATATAATATATATGT chr4 - 94230402 67910059 67910058 67910145 26320258 26320257 26320344 87 TATTACATATACAATACTAAAAATATACTATTAGATACATAA-TAAATATATTGTATATAGTATATATAATATGTAGTATATACATGT .........:.:.-..:..x.x.....-..x..x...:....-..x.......:......x............:..xx.....:.... 13M1I13M1I14M1D45M 70/85 82.4% 87/94230402 0.0% 3/85 3.5% 1461244 NA +7724 chr4 + 190214555 69389545 69389544 69390232 688 TAGCTCTGGGAGT----------TGTGGAAAGGTGCTGGTGTGGGCCACAGAATACAGCCATTGGATGAATATGAAGACAATCCTGAAAGAGCTTGTTCAGAGAGGTCATGAGGTGACTGTACTGGCATCTTCAGCTTCCATTCTTTTTGATCCCAATGATGCATCCACTCTTAAATTTGAAGTTTAT-------CCT---------ACATCTTTAACTAAAACTGAATTTGAGAATATCGTCATGCAACAGGTTAAGAGATGGTCAGACA--TTCGAAAAGATAGCTTTTGGTTATATTTTTCACAAGAACAAGAAATCCTGTGGGAATTATATGA----------CATATTTAGAAACTTCTGTAAAGATGTAGTTT---CAAATAAGAAACTTATGAAAAAACTACAAG--TCAAGATTTGACATCATTTTTGCAGATGCTTCTTTTCCTTGTGGTGAGCTGCTGGCTGAGCTATTTAACA-TACCCTTTGTGTACAGTCTCCGCTTTACTCCTGGCTACACAGTTGAAAGGCACAGTGGAGGACTGATTTTCCCTCCTTCCTACATACCTATTGTTATGTCAAAATTAAGTGATCAAATGACTTTCATGGAGAGGGTAAAAAATATGATCTATGTGATTTATTTT--GACTTTTGGTTCCAAATGTGTGATATGAAGAAGTGGGATCAGTTTTACAGTGAAGTTTTAGGTAAGAATTTGAAGCAAAGCTT chr4 - 94230402 40929493 40929492 40930195 53300208 53300207 53300910 703 TGGCTCTGGTAGCACCTGTCTTCTGTGGGAATGTGCTGGTCTGGCCAACGGAGGGCAGCCACTGGCTAAACGTGAAGATGGTTATTCAGGAGCTCATCCGCCGTGGGCACAGCGTTACCATCCTGGTGTCCAATGCTTCCCTCTTCATTCAGCCAAAGGCTGAGACCACCGAGAAGTTTGAGGTCTATAACGTGCCCTTCAAGAAAGACACCATTG--CAAACCTGA--TTGAAGACATCATGACGTTATGGCTGAACAACAGGCCA-ACAGCTTCGAC-------CTTCTGGCAGTTTT----------ACAAGGAG--CTGGGGAAACTGTCCAAAAGCTGGCACCAGGTCAACAGGCAGATGTGC-GATGCAGTGCTGACCAACCAGGAGCTGATGGCCCATCTGCAGGGCTCTGGCTACGACCTGCTGCTGTCAGACCCAGTGACTCCATGCGGGGACCTCGTAGCT-CTCAAGCTGGCACTGCCTTTTGTGTACTCCCTGCGCTTCTCTCCAGCCTCGACTGTTGAGAGGCACTGTGGCAAGATCCCAGCCCCACCATCCTACACACCTGCGGCCCTGTCTGAGCTCACTGACCACATGTCCTTTGGCGAGAGAATTAAAAATAT--CCTGTCTTATCACTTGCAAGACTACATTTTCCAGA---GCTACTGGGGAGAATGGGACATCTACTACAGCAAGATCTTGGGTAAGCTGTTGCTACATAGCTT .:.......x..:----------.....:..x........x...x.x..:..:x:......:...x.:..::......:::.:x.xx.:.....::.:.:xx.x..x..:::x..x..::.x....::..:xxx......x.::.:x..x.x..x..x.x..x:x....:xxx..:.....:..:...-------...---------...:.x..:--:...x....--....::.:...:.x.:.:x.::.x.x..x.:xx..:..-...--.....x-------...:...:x:.x..----------.....:.:--...x..:..:.:.x::.----------..x:.:x.x.::.xxx...:x-....:...x:---.x..:x..:.:..x...:xxx.x..:..:.--..x:.x.x:...x.xx.x:.xx....:x.xx:xx:...x..:..x..x..xx.:...-xx.x.x:.::..-.:..:.........xx:..x.....:x....x.x..xx..x.....:......x....x:::x.xx:xx:...x..x.......:....::x.::x....x:.::.x.x...:..x...x.:..::xx.....::.x........--:..:.x.x..:xx..x:--....x:xxx.....:.---.:x.:xx.::::.:.....:xxx.x:.....::.::.:..:......xxx...xx:..x..... 13M10I165M7I3M9I9M2D9M2D38M1D3M2I6M7D14M10D8M2D17M10I21M1D10M3I30M2I57M1D12M1I145M2D17M2I16M3D64M 395/657 60.1% 703/94230402 0.0% 77/657 11.7% 28460052 NA +10837 chr4 + 190214555 69389557 69389556 69390215 659 TTGTGGAAAGGTGCTGGTGTGGGCCACAGAATACAGCCATTGGATGAATATGAAGACAATCCTGAAAGAGCTTGTTCAGAGAGGTCATGAGGTGACTGTACTGGCATCTTCAGCTTCCATTCTTTTTGATCCCAATGATGCATCCACTCTTAAATTTGAAGTTTATCCTACATCTTTAA----CTAAAACTGAATTT-------GAGAATATCGTCATGCAACAGGTTAAGAGATGGTCAGACATTCGAAAAGATAGCTTTTGGTTATATTTTTCACAAGAA----------------CAAGAAATCCTGTGGGAATTATATGACATATTTAGAAACTTCTGTAAAGATGTAGTTTCAAATAAGAAACTTATGAAAAAACTACA--AGTCAAGATTTGACATCATTTTTGCAGATGCTTCTTTTCCTTGTGGTGAGCTGCTGGCTGAGCTATTTAACATACCCTTTGTGTACAGTCTCCGCTTTACTCCTGGCTACACAGTTGAAAGGCACAGTGGAGGACTGATTTTCCCTCCTTCCTACATACCTATTGTTATGTCAAAATTAAGTGATCAAATGACTTTCATGGAGAGGGTAAAAAATATGATCTATGTGATTTATTTTGACTTTTGGTTCCAAATGT----GTGATATGAAGAAGTGGGATCAGTTTTACAGTGAAGTTTTAGGTAAG chr4 - 94230402 40935039 40935038 40935705 53294698 53294697 53295364 667 TTGTGGGAAGGTGGTGGTCTGGCCCACCGATGCCAGTCACTGGATCAACATGAAAGTGCTGCTGGAAGAACTCATTCTCCGGGGTCACGAAGTGACTGTGCTGGTACCATCAATAAATATGCTCATTGACTACCAAGACACATCATCTC-----------------CTTTCACCTTTGAGGTCCTGAAAGTGAACTTCACCCAAGAGACCTTCG--ATGC-TCTGATGGTGGACTTCTTAGATCTCTGGATTAATGACCTCC-CTAATCTGTTCCCCTGGGAGGTCATGTGGAGGATGAAAGAAGCCATATACTCCTTTTCCAACTTGTCAAAGCACTCCTGTGATGCCTTGGTGTCAAATCATCAGCTGATAGCAAAGCTGCATCAGGCCAAGTTTGATGTTCTGATCGCTGACCCTTTAGCTGTATGTGGTGAGCTTGCAGCACAACTCCTGGAAATTCCTTTTGTCTACAGCTTCCGTTTTTCTGAGGGAAATGTGGTAGAGCGGCTGTGTGGTGGGCTCCCATCTCCACCTTCTTACGTGCCTGCTAGCACAACAGGGTTGACAGACCAGATGTCCTTTGTGGAGAGACTGTGGAATTTCTTCTTTTACCTTTCCATGGATTTATTTTTCTTAAAGTTTTGGCGAGATGAA----TGGGATGGATACTACAGTAATGTCTTGGGTAAG ......:......x....x...x....x..xxx...:..:.....x..:.....::::x.x...:....:..::...xxx.:.....:..:........:....:.:.x...::xxx:..x..:x....::x.x.x..::....xx...-----------------.:.x..:....:.----..:...x....:..-------....x:x...--....-x.x.:.x:x.::x.xx.:...:x.::.:.xx:..::.:.::-x.x..x.x..:.x.x:.:.----------------x.....::.x.:.:xxxx..x.x::..x.:.:x.::x...:....:.x.x:x.:..x......x.xx.:..x..::x...:..:..--..x.x.::.....::.:x.xx.:..x..:x...:xx:.x:x...........xx::..xx.:..x:.x:.x..x..:.....x.....::....:...x..xxx..xx.::::..x..:x...xxx....x..:..xx:x.::..x.....:...:.:...::.:x:.::x..:::..:.xx..:..:...x.:..::.......:x.:x::...x.xx...x.xxxx...x:x.x..:..x.xx...:x..x..----.:..x.....----......x::.x:......:.x..:..:...... 149M17D13M4I14M7I10M2D4M1D41M1D19M16I86M2I255M4I10M4D33M 378/634 59.6% 667/94230402 0.0% 58/634 9.1% 28454518 NA +8765 chr4 + 190214555 69391460 69391459 69391624 165 CAGGAAGACCCACTACCTTATTTGAGACAATGGGGAAAGCTGACATATGGCTTATGCGAAACTCCTGGAATTTTCAGTTTCCTCATCCTTTCTTACCAAACGTTGATTTTGTTGGAGGACTCCACTGCAAACCTGCCAAACCCCTACCTAAGATAAACATACTTT chr4 - 94230402 40937986 40937985 40938150 53292253 53292252 53292417 165 CAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTATTCTGACTTT .......:.....x..x:.:.x......:.....:.....x..x........x..xx...xx.x....:.....x.:.......::......:.:..x...x....x..............:......x.:.....x..:..x..:..x...:..xx.xx..... 165M 126/165 76.4% 165/94230402 0.0% 0/165 0.0% 28453474 NA +6588 chr4 + 190214555 69395681 69395680 69395830 150 TTTTTTTTCACAGGAAATGGAGGAGTTTGTACAGAGCTCTGGAGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAATCATAAGTAACATGACAGCAGAAAGGGCCAATGTAATTGCAACAGCCCTGGCCAAGATCCCACAAAAGGTAAG chr4 - 94230402 40939389 40939388 40939538 53290865 53290864 53291014 150 TTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAG ..:.x::..x:.......x..:..:.....x.....:..x..:...x....::.......:........x........x:.xx::...x.:..x:xx.....::x:.....:.....x.x......x:x.x..x.:........x..:.. 150M 105/150 70.0% 150/94230402 0.0% 0/150 0.0% 28456292 NA +4292 chr4 + 190214555 69398605 69398604 69398698 94 AGGTTCTGTGGAGATTTGATGGGAATAAACCAGATGCTTTAGGTCTCAATACTTGGCTGTACGAGTGGATATCCCAGAATGACCTTCTAGGTAA chr4 - 94230402 40939912 40939911 40940005 53290398 53290397 53290491 94 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGA ....:..x...x...x::.x..x..x........x...:.x..:::...:..:x..x.x..:..x......:....:........x..x...:. 94M 67/94 71.3% 94/94230402 0.0% 0/94 0.0% 28458693 NA +10769 chr4 + 190214555 69399530 69399529 69399757 228 AGGTCATCCAAAAACCAGAGCTTTTATAACTCATGGTGGAGCCAATGGCATCTATGAGGCAATCTACCATGGGATCCCTATATTGGGCATTCCATTGTTTGCCGATCAACCTGATAATATTGCTCACATGAAGGCCAAGGGAGCAGCTGTTAGATTGGACTTCAACACAATGTCGAGTACAGA--CTTGTTGAATGCACTGAAGACAGTAATTAATGTTCCTTTGTGAGT chr4 - 94230402 40940731 40940730 40940958 53289445 53289444 53289672 228 AGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTG-ATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ...:.....xxx::.x.::..:..:..x...........::.......x........:..x..:........:.....x..:x.x..x.....xx.......:..:..:.x...:..::............:...x..:.....x..x...::::....:....:....x..x...-:.....--..x....-.....x....x.....x.....::x.:..x:...... 176M1D6M2I7M1D37M 169/226 74.8% 228/94230402 0.0% 4/226 1.8% 28458799 NA +12301 chr4 + 190214555 69401784 69401783 69402089 306 TCTTTATTTTTATCCTTCAGATATAAAGAGAGTGTTATGAAATTATCAAGAATTCAACATGATCAACCAGTGAAGCCCCTGGATCGAGCAGTCTTCTGGATTGAATTTGTCATGCGCCACAAAGGAGCCAAACACCTTCGAGTTGCAGCCCGTGACCTCACCTGGTTCCAGTACCACTCTTTGGATGTGATTGGGTTTCTGCTGGCCTGTGTGGCAACTGTGACATTTATCATCACAAAGTGTTGTCTGTTTTGTTTCTGGAAGTTTACTAGAAAAGTGAAGAAGGAAAAAAGGGATTAGTTATGT chr4 - 94230402 40941580 40941579 40941882 53288521 53288520 53288823 303 TCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAG---GGTCACAAAGAAAAAGAAAGAATAGATACAT ..:..x:...:x.::.....x..:..:..:......x.:..:.....x.::..x..x..:..:..:...:.x.....:.....:x....x..........................:...........x..:...:.xx..x:x..x..:.::x.:..:.......x...........x::.......xx.x.x:..::..:.x::.....::..x.:..:x:xx..:..:x.:::x.....:..:x.......:.x:x.:..:.x.:x...---:..x.x:...:....:.::..x...x..::. 272M3D31M 204/303 67.3% 303/94230402 0.0% 3/303 1.0% 28460204 NA +7112 chr4 + 190214555 69408890 69408889 69409562 673 TAGCTCTGGGAGT----------TGTGGAAAGGTGCTGGTTTGGGCCACAGAATACAGCCTTTGGATGAATATGAAGACAATCCTGAAAGAGCTTGTTCAGAGAGGTCATGAGGTGACTGTACTGGCATCTTCAGCTTCCATTCTTTTTGATCCCAACGACTCATCCACTCTTAAACTCGAAGTTTAT-------CCT---------ACATCTTTAACTAAAACTGAATTTGAGAATATCGTCATGCAACAGGTTAAGAGATGGTCAGACATTCCAAAAGATACATTTTGGTTATATTTTTCACAAGAACAAGAAATGCTGTAGGAA---TTACATGACATATTTAGAAAATTCTGTAAAGATCTCATTTCAAATAAGAAACTTATGAAAAAACTATTAGAGTCAAGATTTGACATCGTTTTTGCAGATGCTTTTTTTCCCTGTGGTGAGCTGCTGGCTGCGCTACTTAACA-TACCCTTTGTGTACAGTCTCCGCTTTACTCCTGGCTACACAGTTGAAAGGCACAGTGGAGGACTGATTTTCCCTCCTTCCTACATACCTATTGTTATGTCAAAATTAAGTGATCAAATGACTTTCATGGAGAGGGTAAAAAATATGATCTATGTGATTTATTTT--GACTTTTGGTTCCAAATATGTGATATGAAGAAGTGGGATCAGTTTTACAGTGAAGTTTTAGGTAAG chr4 - 94230402 40929493 40929492 40930178 53300225 53300224 53300910 686 TGGCTCTGGTAGCACCTGTCTTCTGTGGGAATGTGCTGGTCTGGCCAACGGAGGGCAGCCACTGGCTAAACGTGAAGATGGTTATTCAGGAGCTCATCCGCCGTGGGCACAGCGTTACCATCCTGGTGTCCAATGCTTCCCTCTTCATTCAGCCAAAGGCTGAGACCACCGAGAAGTTTGAGGTCTATAACGTGCCCTTCAAGAAAGACACCATTG--CAAACCTGA--TTGAAGACATCATGACGTTATGGCTGAACA---------ACAGGCCAACAGCTTCGACCTTCTGGCAGTTTTACAAGGAGCTGGGGAAACTGTCCAAAAGCTGGCACCAGGTCAACAGGCAGATGTGCGATGCAGTGCTGACCAACCAGGAGCTGATGGCCCATCTGCAGGGCTCTGGCTACGACCTGCTGCTGTCAGACCCAGTGACTCCATGCGGGGACCTCGTAGCT-CTCAAGCTGGCACTGCCTTTTGTGTACTCCCTGCGCTTCTCTCCAGCCTCGACTGTTGAGAGGCACTGTGGCAAGATCCCAGCCCCACCATCCTACACACCTGCGGCCCTGTCTGAGCTCACTGACCACATGTCCTTTGGCGAGAGAATTAAAAATAT--CCTGTCTTATCACTTGCAAGACTACATTTTCCAGA---GCTACTGGGGAGAATGGGACATCTACTACAGCAAGATCTTGGGTAAG .:.......x..:----------.....:..x........:...x.x..:..:x:.....x:...x.:..::......:::.:x.xx.:.....::.:.:xx.x..x..:::x..x..::.x....::..:xxx......x.::.:x..x.x..x..x.x:xx:x....:xxx..::.:..:..:...-------...---------...:.x..:--:...x....--....::.:...:.x.:.:x.::.x.x..x.---------...xx....x..x.x.:x::.xx.x::.x....xxx.:..:.x:.::.x:....xx:..---.x:..:x.x:.xxx:..:x.:x.x..::.x.xxx.xx.xx.x..:x..:.:..x...:xxx.x..::x:.:x..x:.x.x:...x.xx.x:.xx....:x.xx.xx:...x..:..x..x..xx.:...-.x.x.x:.::..-.:..:.........xx:..x.....:x....x.x..xx..x.....:......x....x:::x.xx:xx:...x..x.......:....::x.::x....x:.::.x.x...:..x...x.:..::xx.....::.x........--:..:.x.x..:xx..x:--....x:xxx.....:.---.:x.:xx.::::.:.....:xxx.x:.....::.::.:..:...... 13M10I165M7I3M9I9M2D9M2D30M9D59M3I129M1D12M1I145M2D17M2I16M3D47M 372/654 56.9% 686/94230402 0.0% 51/654 7.8% 28479397 NA +9638 chr4 + 190214555 69408902 69408901 69409562 661 TTGTGGAAAGGTGCTGGTTTGGGCCACAGAATACAGCCTTTGGATGAATATGAAGACAATCCTGAAAGAGCTTGTTCAGAGAGGTCATGAGGTGACTGTACTGGCATCTTCAGCTTCCATTCTTTTTGATCCCAACGACTCATCCACTCTTAAACTCGAAGTTTATCCTACATCTTTAA----CTAAAACTGAATTT-------GAGAATATCGTCATGCAACAGGTTAAGAGATGGTCAGACATTCCAAAAGATACATTTTGGTTATATTTTTCACAAGAA----------------CAAGAAATGCTGTAGGAATTACATGACATATTTAGAAAATTCTGTAAAGATCTCATTTCAAATAAGAAACTTATGAAAAAACTATTAGAGTCAAGATTTGACATCGTTTTTGCAGATGCTTTTTTTCCCTGTGGTGAGCTGCTGGCTGCGCTACTTAACATACCCTTTGTGTACAGTCTCCGCTTTACTCCTGGCTACACAGTTGAAAGGCACAGTGGAGGACTGATTTTCCCTCCTTCCTACATACCTATTGTTATGTCAAAATTAAGTGATCAAATGACTTTCATGGAGAGGGTAAAAAATATGATCTATGTGATTTATTTTGACTTTTGGTTCCAAATAT----GTGATATGAAGAAGTGGGATCAGTTTTACAGTGAAGTTTTAGGTAAG chr4 - 94230402 40935039 40935038 40935705 53294698 53294697 53295364 667 TTGTGGGAAGGTGGTGGTCTGGCCCACCGATGCCAGTCACTGGATCAACATGAAAGTGCTGCTGGAAGAACTCATTCTCCGGGGTCACGAAGTGACTGTGCTGGTACCATCAATAAATATGCTCATTGACTACCAAGACACATCATCTC-----------------CTTTCACCTTTGAGGTCCTGAAAGTGAACTTCACCCAAGAGACCTTCG--ATGC-TCTGATGGTGGACTTCTTAGATCTCTGGATTAATG-ACCTCCCTAATCTGTTCCCCTGGGAGGTCATGTGGAGGATGAAAGAAGCCATATACTCCTTTTCCAACTTGTCAAAGCACTCCTGTGATGCCTTGGTGTCAAATCATCAGCTGATAGCAAAGCTGCATCAGGCCAAGTTTGATGTTCTGATCGCTGACCCTTTAGCTGTATGTGGTGAGCTTGCAGCACAACTCCTGGAAATTCCTTTTGTCTACAGCTTCCGTTTTTCTGAGGGAAATGTGGTAGAGCGGCTGTGTGGTGGGCTCCCATCTCCACCTTCTTACGTGCCTGCTAGCACAACAGGGTTGACAGACCAGATGTCCTTTGTGGAGAGACTGTGGAATTTCTTCTTTTACCTTTCCATGGATTTATTTTTCTTAAAGTTTTGGCGAGATGAA----TGGGATGGATACTACAGTAATGTCTTGGGTAAG ......:......x....:...x....x..xxx...:.x:.....x..:.....::::x.x...:....:..::...xxx.:.....:..:........:....:.:.x...::xxx:..x..:x....::x.x.x...x....xx...-----------------.:.x..:....:.----..:...x....:..-------....x:x...--....-x.x.:.x:x.::x.xx.:...:x.::x:.xx:..:-.::.:xx.x..x.x..:.x.x:.:.----------------x.....::xx.:..xxxx..x:x::..x.:.:x.::x.x.:....:.x.x::.x:.x......x.xx.:..x..::x...:..::xxx..x.x.::.....::.:x.xx.:..x..:x....xx:.x:x...........xx::..xxx:..x..x:.x..x..:.....x.....::....:...x..xxx..xx.::::..x..:x...xxx....x..:..xx:x.::..x.....:...:.:...::.:x:.::x..:::..:.xx..:..:...x.:..::.......:x.:x::...x.xx...x.xxxx...x:x.x..:..x.xx...:x..x:.----.:..x.....----......x::.x:......:.x..:..:...... 149M17D13M4I14M7I10M2D4M1D35M1D25M16I343M4I10M4D33M 372/636 58.5% 667/94230402 0.0% 56/636 8.8% 28473863 NA +8592 chr4 + 190214555 69410846 69410845 69411000 155 CAGGAAGACCCACTACCTTATTTGAGACAATGGGGAAAGCTGACATATGGCTTATGCGAAACTCCTGGAATTTTCAGTTTCCTCATCCATTCTTACCAAACGTTGATTTTGTTGGAGGATTTCACTGCAAACCTGCCAAACCCCTACCTAAGGTA chr4 - 94230402 40937986 40937985 40938140 53292263 53292262 53292417 155 CAGGAAGGCCCACAACACTGTGTGAGACGATGGGAAAAGCAGAGATATGGCTAATCAGAACATACTGGGATTTTGAATTTCCTCGCCCTTTCCTGCCCAACTTTGAGTTTGTTGGAGGACTTCACTGCCAGCCTGCAAAGCCACTGCCAAAGGTA .......:.....x..x:.:.x......:.....:.....x..x........x..xx...xx.x....:.....x.:.......::..x...:.:..x...x....x............:........x.:.....x..:..x..:..x...... 155M 120/155 77.4% 155/94230402 0.0% 0/155 0.0% 28472860 NA +7215 chr4 + 190214555 69415053 69415052 69415221 169 TTTTGTGATGA-----AACAATTTTTTTTTTTCACAGGAAATGGAGGAGTTTGTACAGAGCTCTGGAGAAAATGGTGTTGTGGTGTTTTCTCTGGGGTCAATGGTCAGTAACATGACAGCAGAAAGGGCCAACGTAATTGCAACAGCCCTTGCCAAGATCCCACAAAAGGTAAG chr4 - 94230402 40939365 40939364 40939538 53290865 53290864 53291038 174 TTTTGTGATTACCGTTAGTATGCCTTCTGCCTCCTAGGAAATCGAAGAATTTGTTCAGAGTTCAGGGGAACATGGCATTGTGGTATTTTCTCTCGGGTCAATGGTCTACAACCTAACCAGTGAAAGAAGTAATGTGATTGCCAGAGCCCTCAGCCAGCTTCCACAAAATGTGAG .........x.-----.::.xx::..:.x::..x:.......x..:..:.....x.....:..x..:...x....::.......:........x............x::...x.:..x:xx.....::x:..:..:.....x.x......::x.x..x.:........x..:.. 11M5I158M 119/169 70.4% 174/94230402 0.0% 5/169 3.0% 28475688 NA +5749 chr4 + 190214555 69418016 69418015 69419171 1156 AGGTTCTGTGGAGATTTGATGGGAATAAACCAGATGCTTTAGGTCTCAATACTCGGCTGTACAAGTGGATACCCCAGAATGACCTTCTAGGTAACACTCTGGTGAACAAATACTGGATATATTAGTAACTGCACATTAGAGTGTTAATAGTTCATCTTGAAACAAGCTTATTGATTATTTGTTATAGGAAAACAAAAAGGAACTTCTTTATATTTATTTTCCAGTCCTAGGGGAAAAGAATATACTATAATTGTTGGCATTTTGTGATACACACTCACATTCTTTATGGTCAGAATCAGAGAGAATCTTTATTTCAGGTGTTATTATATCTCA-----CAGAATTTTTCAATATCTT----CCTTGGCTGTCTCTCTGTCTCCTATTTCTACAGCTTTACACCTGTTTTCTCCTCTCCTGCA---GGGTTATTTCAAATGCCACTAAATATAATAGCTCTTCTATC------------ACCAGTGACTCTGTATTTTCCGGAGGACTAAATTC---CTAATCTTAATCTTAAAGTAATGACACATTTCATGATGAAGTGTAACCTGTCTTTCCTCAATCCTAGCACCACCAACAACCCACTGCCTGCTGCCTTGCATACC------CCGCATATCACACTCTGTGACTGTACTTAAAATAAAACTTTATTTCATGCCCATC-TCTTTGCTGTCC-TCTTTTGTGCACATTTAAAAAATCTAGAATGCACTTTTCA--TTAGTGCAACTGAAAATCTT------------GTATTAAGTTTTG-CAGTCTGAAGTCACACACACCAT--------ATAGCTTTCAGTTACATCTCCTAAAC----AAGTACGTGCTTTTTCAT---CTGAAGTCTGAAAAGTA---ATAGCAAATTAGTTCAATGTG--TTATCTAGAAAACACTGTCACTTTCAGAGCCTTTCATTGTGCATCTCATTT------------------TATTCCTATGAATA----ATTTTGCTA--AAATTCATCCAATCCT---------AGGTCATCCAAAAACCAGAGCTTTTATAACTCATGGTGGAGCAAGTGGCATCTATGAGGCAATCTATCATGGGATCCCTATGGTGGGCATTCCATTGTTTTGGGATCAACCTGATAACATTGCTCACATGAAGGCCAAGGGAGCAGCTGTTAGACTGGACTTCCACACAATGTCGAGTACAG-ACCTGCTGAATGCACTGAAGACAGTAATTAATGATCCTTTGTGAGT chr4 - 94230402 40939912 40939911 40940958 53289445 53289444 53290491 1047 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA-----ATGATTCTATCTGGGATGAATT--------------------------------------ACACCCTT-----------------------CGCAAAGTTATTTCC-----TTTGTTTTTC--------------------TGCTAAAATGGCT--CATTTGGCTGAAAGAACCCCAACACTTAATGGCTACAGTTAG----------------------TTTTGTACCACAAGCAGCAGAGGTTT----GATCTTGAAGCCCTA-----------ATTTCCTAGTT---------------TGTTTTTGACTTTGTGGCAAGTGGGCTA-TACAAGAACCATGGAAGAT-ACAGCCAGACCATAAAGGGAGTAGGGATCAGTGGCTCAG--------GAAGGCAGCAATTTGAGCTAAGCT----------ATACAGATGGATCTCATAAGGAAAAGT------------CCCAGTCTTAAC-------AGAGCCCAGTGGCATCAGTCTGCAAGGACTAAGAACCACATGTCA--------GACAGTA---AGAAAGAAGGTATGTGTTCTGGACTTCAACATTGCAGTTCATTTCTCGGGCACATTC------TTCCAAATGCATCAAGCATCTTAGGTCAACTAGAAAGCTGCAGAAGAGACTATTATGAACCTGAGCCAATGTGAAAACTAGAACAGCATGACTGCAGAAGGACTGAAGTAACTTCACAGTAGTCTGGAGGCATATACTAGTTCACATACTGCATTCAAATATGAATATGTGGAAGTTAAGCTAAGTGTGCATGCTCTGG-------TGCCAATCCAGAAG----TCAGGGTGCATTTGCTCTAGTAGTTGACAGCTCTGATACTCCTGTGAACATGGCCTGCTGCTGCTACATGTGTCTCACCTTCCTTGTTGCAGGCCATCCCTTGGCAAAGGCCTTCATTACTCATGGTGGGACCAATGGGATCTATGAAGCTATTTACCATGGAATCCCAATGGTTGGGATTCCCATGTTTGCTGACCAGCATGACAACGTTGCTCACATGAGGGCAAAAGGAGCTGCAGTTGAGCTGGATTTCAGCACACTGACGA-CACAGAATCTAGTTGATGCAGTGAATACAGTCATTAACAATTCTACGTGAGT ....:..x...x...x::.x..x..x........x...:.x..:::...:..:x..x.x..::.x...........:........x..x...:.x.-----:...x:xx..x:x....:x...--------------------------------------...xx...-----------------------.:x....xx.:...:-----...:....:.--------------------.:...x...x.:.--.....x.:x:x.x:x..:.xx.:x...x....::.x.:.:..----------------------.x..:..:.x..-----....:x...----x.....----..:.:-----------:.:.....x..---------------......:xx..:.x:x...---...:..-.x...:x:...:x:..x..-.:...:xxx.:..x------------.:.....:...x.--------.:...xxxx....:---....x..----------:..xx..::x..:....:.x...:x..------------.:..:..:..:.-------.x.:....x..x.xx.x.:..xxx.x:x.------..:...:...--------...x...---.:..x:..:x.x.:.x.:x..xx.x..-x.x....x..:.-.:.:.:.x.......:------.::x:......::xxx..--....xx.....::...x..x------------x...x..x:.xx.-..:.x....:x.xx:x...x...--------.x:.x:.xx...x..x..x.xxx.::----.:.:.::.:..xx....:---...x.x..x:.x.x.x.---:.:.x.:x.x..:.x.:....--.xx...:.-------..:..x.::x::..----...xx......:.xx.:.------------------..:....:....:.----x.x:....:--.x..x::..:x.:.:.---------...:.....xxx::.x.::..:..:..x...........::.x.:...x........:..x..:..:.....:.....x.....x..x.....xx.....xxx..:..:.x...:...:............:...x..:.....x..x...:::.....:...x:....x..x...-:....-.:..:x.x:.....x....x.....x.....::..:..x:...... 96M5D22M38D8M23D15M5D10M20D13M2D42M22D12M5I9M4D6M4I5M11D11M15D19M3I6M1D19M1D14M12I13M8D14M3I7M10D27M12D12M7D29M6I10M8D7M3D27M1I12M1I16M6D18M2I20M12I13M1I23M8I26M4I18M3I17M3I21M2I8M7D14M4D18M18I14M4I9M2I16M9I176M1D5M1I46M 612/943 64.9% 1047/94230402 0.0% 317/943 33.6% 28478104 NA +3028 chr4 + 190214555 69420974 69420973 69421018 45 ACATATATACATAAACAATATACATGTATGTATTGTATATATCAA chr4 - 94230402 84587120 84587119 84587164 9643239 9643238 9643283 45 ACAAATATATACACACAATATATATGTATGTATCGTATATATAAA ...x.....:.:.x........:..........:........x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -15166146 -79064256 +12057 chr4 + 190214555 69422867 69422866 69423172 306 TCTTTATTTTTGTCCTTCAGATATAAAGAGAATGTTATGAAATTATCAAGAATTCAACGTGATCAACCAGTGAAGCCCCTGGATCGAGCAGTCTTCTGGATTGAATTTGTCATGCGCCACAAAGGAGCCAAACACCTTCGAGTTGCAGCCCGTGACCTCACCTGGTTCCAGTACCACTCTTTGGATGTGATTGGGTTTCTGCTGGCCTGTGTGGCAACTGTGACATTTATCATCACAAAGTGTTGTCTGTTTTGTTTCTGGAAGTTTACTAGAAAAGTGAAGAAGGAAAAAAGGGATTAGTTATGT chr4 - 94230402 40941580 40941579 40941882 53288521 53288520 53288823 303 TCCTTTCTTTCTTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAG---GGTCACAAAGAAAAAGAAAGAATAGATACAT ..:..x:...:x.::.....x..:..:..:.:....x.:..:.....x.::..x..x.::..:..:...:.x.....:.....:x....x..........................:...........x..:...:.xx..x:x..x..:.::x.:..:.......x...........x::.......xx.x.x:..::..:.x::.....::..x.:..:x:xx..:..:x.:::x.....:..:x.......:.x:x.:..:.x.:x...---:..x.x:...:....:.::..x...x..::. 272M3D31M 202/303 66.7% 303/94230402 0.0% 3/303 1.0% 28481287 NA +3001 chr4 + 190214555 69428886 69428885 69428928 43 CTTCTGTTTCTCTCTCTCTCTCTTTCTGTTTCTTTCTCTTTTT chr4 - 94230402 43081982 43081981 43082024 51148379 51148378 51148421 43 CTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...........:...........:.....xx...::.....:. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 26346904 NA +3123 chr4 + 190214555 69434765 69434764 69434846 82 AATAAGAGCCAAAAAAATGCCGAAGAGAGATCAATAGAGATTATATAATCCAAAGAACAGAGAAACAAAGAATGAAGAGAAA chr4 - 94230402 4730960 4730959 4731041 89499362 89499361 89499443 82 AAAAAGAACTGAAAACTTTTCAAAAATGCATAAAGAGAAATTATTTCACTTTAAGAAAAGAGAAAAAAAAAATAAAGAGGAA ..x....:.::....xx.x:.:..:.x:x..x..x...:.....x.x.:::x.....x.......x...:...:.....:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 64703805 NA +5188 chr4 + 190214555 69438323 69438322 69438548 226 TAATCCTAGGTCATCTAACAACCAAAGCTTTTATACCTCATGGTGGAGGCAATGACATCTATGAGAGGATCTACCATGGGATCCCTATGGTGGGCCTTCCTTTGTTTGTAGATCAACCCGATAAGTTGGTTCACATGAAGGCTAAGGGGGAAGCTGTTACAGTAGACTCAAAAACGATGTCATCTACA--AATTTGCTCAATGCATAAAAAGCAGTCATTAATGACTC chr4 - 94230402 36415956 36415955 36416181 57814222 57814221 57814447 226 TATTTCCAGGTCACCCTAACATAAAAGCTTTTCTTAGTCATGGTGGTTTGAACAGCATTTTTGAAACCATGTACCATGGGGTCCCAGTGGTGGGAATTCCCCTTTTCGGAGACCATTACGATACTATGACCCGAGTGCAGGCCAAAGGCATGGGAATATTGTTGAACTGGAAGAC--TGTCACTGAGAGTGAATTGTATGAAGCACTAGAAAAAGTTATTAATGATCC ..x.:.:......:.:x.xx.:x.........x.xxx.........xxxx..:::...:.x...:.xx..x.........:....x:.......xx....::.x..:.x...:..x:x.....xxx..:::.:x:..x....:..:..x:x:.xx:.xx::x.::...x:..:..--.....::x.x.--:.x...:x::.x...:x.:..:x...:........::. 175M2D11M2I38M 135/224 60.3% 226/94230402 0.0% 4/224 1.8% 33022367 NA +9542 chr4 + 190214555 69440870 69440869 69441141 272 TTTCCTTAACTGTAAAGAGAATGTTATATGGTTATGAATCATTCATTATGATCAGCTTATGAAGCCCATGGACCAAACAGTCTTCTGGATCAAGTTTGTCATGCGCCACAGAGGAGCCAAGTACTTGCTGCCGCCTGCGAACAACCTCACCTGGCTCCAGTACTGCTCTCTGGTTGTGCTGGC------------CTGCGAGGCAATTTTTACTCTCTTTGTCATGATATGTTTCTTGTTTGATTATCAAAAGTTTGTTAAG---ACAAGAAAAAAGTAGAGAGTAG chr4 - 94230402 40941591 40941590 40941876 53288527 53288526 53288812 286 TTTTTTCAGCTACAAGGAAAGTGTTTTAAAGTTATCCAAGATACACCACGACCAGCCAATTAAGCCTCTGGACAGAGCTGTCTTCTGGATTGAATTTGTCATGCGTCACAAAGGAGCAAAGCACTTGAGACCAGCTGCTCACCATCTTACCTGGTACCAGTACCACTGCCTGGATGTTCTGGCATTCTTGTTCATCTGTGCAGCCATTGCTGGCTTCATTCTTGTCAAGTGCTGCATGTTTTGCTGTAGAAAATGTGGTAGGGTCACAAAGAAAAAG-AAAGAATAG ...::.:.:..::..:..:.:....x..x:.....xx.xx..x..::.:..:....:x..x.....:x.....x:.:.x...........::.:...........:....:......x...:.....xx:..:x....xx..x.:..:......:x.......::..x:....x...x.....------------...:.x:..x...x:.:x::..x..x.::.x.x:..:.x.x.....x::.:.x:...:.x..x..:.---....::......-.:...:... 183M12I67M3I12M1D9M 182/271 67.2% 286/94230402 0.0% 16/271 5.9% 28499279 NA +3765 chr4 + 190214555 69451510 69451509 69451605 96 AGGTTTTATGGAGATTCAAAGGAAAGAAACCAACTACATTAGGTGCCAATACTCAGCTCTATGTTTGGATATGCCAGAGTGATCTTCATGGTAAGA chr4 - 94230402 40939912 40939911 40940007 53290396 53290395 53290491 96 AGGTCCTCTGGCGATACAAAGGTAAAAAACCAGAAGCTCTTGGCTCCAACACCAGGATTTATGACTGGATACCCCAAAATGACCTGCTTGGTGAGA ....::.x...x...x......x..:......:xx:.x:.x..:x....:..:x:.x.:....x:......:x...:.:...:..x.x....:... 96M 64/96 66.7% 96/94230402 0.0% 0/96 0.0% 28511598 NA +3043 chr4 + 190214555 69462709 69462708 69462779 71 CTTTCTTTCCATGTCTTCCTTTTCCCTTCATCTCTTCACCTATTTCTGTACATCATTCAGGTTTTGCTTTT chr4 - 94230402 58312350 58312349 58312420 35917983 35917982 35918053 71 CCTCCTGTTTCTGTTGTTTCTCTTCATTCATCTCATCTCCTATTTCTGTACCTCGCTCATGTTTGGTTCTT .:.:..x.::x...:x.:::.:.:.x........x..x.............x..::...x....x.:.:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 11150359 NA +3169 chr4 + 190214555 69479338 69479337 69479391 54 AGATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTT chr4 - 94230402 19704278 19704277 19704331 74526072 74526071 74526125 54 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCT .:...:.......::.....:.x.....:...x::..............x:.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 49775060 NA +3183 chr4 + 190214555 69479340 69479339 69479395 56 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTAT chr4 - 94230402 19704282 19704281 19704337 74526066 74526065 74526121 56 ACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT .:.......::.......x.....:...x::..............x:.x..x..:. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 49775058 NA +3091 chr4 + 190214555 69500494 69500493 69500559 66 AAGAAAGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGACAAGAAAGAAA chr4 - 94230402 48273074 48273073 48273139 45957264 45957263 45957329 66 AGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA .:..:....x.....::.x..:....::x..x:.x.:..x......:.:...:..x......:... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 21227420 NA +3141 chr4 + 190214555 69500561 69500560 69500631 71 CAAGAAAAGAAAGCAAGAAAGCAAGAAAGCAAGCAAGAAAGCAAGGAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 7997250 7997249 7997320 86233083 86233082 86233153 71 CAGAAGAAAAAGGCAAAAAGACCAAAAAGAGAACACGGAGGCGTAGAACAAAAAACGAAGGGAAGAAAGAA ..::.:..:..:....:..::.x.:....x:.:..x.:.:..:x:...x...:..x...:.:......... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 61503311 NA +3304 chr4 + 190214555 69500595 69500594 69500693 99 AAGAAAGCAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAAGAAAAGAAAGCAAGCA chr4 - 94230402 36858285 36858284 36858383 57372020 57372019 57372118 99 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCA ..x..x:::..:..x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x...:.x:.:.:..:.:.....x.... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 32642310 NA +3172 chr4 + 190214555 69500597 69500596 69500666 70 GAAAGCAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858307 36858306 36858376 57372027 57372026 57372096 70 GAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..........:...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 32642290 NA +3076 chr4 + 190214555 69502031 69502030 69502111 81 GACATCATCCTGCCTTGTCTCTCTTTCCCTTCCTTCCTTCTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 32546787 32546786 32546867 61683536 61683535 61683616 81 GATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT ..:...x....::xxx.xx:x..:x...........:..x............:::x.x::..:...x...::...:..:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 36955244 NA +3540 chr4 + 190214555 69502045 69502044 69502168 124 TTGTCTCTCTTTCCCTTCCTTCCTTCTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCTT chr4 - 94230402 28459086 28459085 28459209 65771194 65771193 65771317 124 TTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTT ..:.:x..:.:.x:x:.....x...x..:...::...:..:::xx:x...x.:..:x:.::xx.::.......:.::xx.:...x.x::.....:.....:x........:....:.:xx.... 124M 73/124 58.9% 124/94230402 0.0% 0/124 0.0% 41042959 NA +3118 chr4 + 190214555 69502056 69502055 69502114 59 TCCCTTCCTTCCTTCTTTTCTTTCTTTCTTTCTCTC-TCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 32546808 32546807 32546867 61683536 61683535 61683595 60 TCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT ...x.:............x:...........::.x.-..:..:..x:......:....:. 36M1I23M 46/59 78.0% 60/94230402 0.0% 1/59 1.7% 36955248 NA +3652 chr4 + 190214555 69526100 69526099 69526199 100 CTGCGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTCCAATAG------AGATAGTCCATAGTGAAGAGTGTTTAAAGAATATTTAGT chr4 - 94230402 30765307 30765306 30765409 63464994 63464993 63465096 103 CTGCTTTTCAACAACAAAGAGTAAAGAGTAGGAAAAAAAAAAAAAAAAAAGGCATAATTAGACCCTTAAAGAATCCAAAATGAAGA---TTTGGTTAACATTCAGT ....x......x..x...:.:x...:.:x.::.....................x:x.x...------.:.x.:....x.:......---...::xx..:...:... 61M6I19M3D17M 71/97 73.2% 103/94230402 0.0% 9/97 9.3% 38760793 NA +3069 chr4 + 190214555 69541432 69541431 69541500 69 AGGGAGACTCCATCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAACAGAAAAGAAAAAATTAAAC chr4 - 94230402 37322377 37322376 37322445 56907958 56907957 56908026 69 AAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGAC .:.:.:.x:..x.x:......:..........:.....:...:.:..:.::..::..:...::x.::.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 32219055 NA +3743 chr4 + 190214555 69572888 69572887 69573007 120 AGTGGAAGAAGTTAAAGCCAAAAGGAAATTTATATATATACATATATATATATATGTATATATACACACATGTACATATATATAC--------------------------ATGTATATATATATACATGTACATATATATACATG chr4 - 94230402 25393232 25393231 25393377 68837026 68837025 68837171 146 AGGGCAGGAAATTAAGTTCTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCACATG ..x.x.:...:....:x:.x:.x::....x.:.::..:.::..:...:...x.:...:..:.:.......:.:...::.x:x...--------------------------:...:.:..x:...::.....::......:..... 85M26I35M 77/120 64.2% 146/94230402 0.0% 26/120 21.7% 44179656 NA +3085 chr4 + 190214555 69572944 69572943 69573003 60 TATATATACACACATGTACATATATATACATGTATATATATATACATGTACATATATATA chr4 - 94230402 53016466 53016465 53016525 41213878 41213877 41213937 60 TATGTATCCACACATGAACATATGAATTACTGTACATGTACACATATGTACATACAAATA ...:...x........x......:x..xxx....:..:..:.:.:.........:.x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 16556478 NA +3549 chr4 + 190214555 69578497 69578496 69578682 186 TCCTCCTCCTCCTCCTCCTTC----TTTCTTCTTCTTCTCCTTCTACTTCTCTTCTTTCTCTCCCTCTTCTTTTCTTCTGTTCTGTTCTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCT-CCTTCTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCCTTCTTCTTCTGCTTCTTCATCTTCTTCCTCC chr4 - 94230402 38122946 38122945 38123113 56107290 56107289 56107457 168 TCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTC-------CCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCT-----------TTTTTCCGCT-----ACATTCTTCCCTC .....xx:.x.:.:......:----......:..:....x.......x:::x.xx..:x..xx...x:...x...-------.::..:...:...x:.x.:..:....x.x::.....x..-:x..:...x.x.x..:::.:....x.....-----------..:...:...-----.:x.......::. 21M4I50M7D39M1I30M11D10M5D13M 108/163 66.3% 168/94230402 0.0% 28/163 17.2% 31455551 NA +3062 chr4 + 190214555 69609301 69609300 69609373 73 AACACCAAACCT-----AGCTATTTTTTTCTTTTCTTTTCTACTATTTTTTATTTTTCAGTTTTAATTTTTTGTTTGT chr4 - 94230402 15419008 15419007 15419085 78811318 78811317 78811395 78 AAAAGCAAGCCTTTTGCAGCTTCCTTTTGCTTTCCATTTCTATTATTTATTTTCTTTCAATCTTGTTTTGTTGTTTAT ..x.x...:...-----....x::....x....:.x......:.....x..x.:.....:.:..:x...x......:. 12M5I61M 54/73 74.0% 78/94230402 0.0% 5/73 6.8% 54190293 NA +4135 chr4 + 190214555 69627511 69627510 69627629 119 AAGAAAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAGA--GAAAGAAAAAAAGAAGAAAGAAAAGAAAGAAAGAAAGAGAAGAAAGAAAAAA chr4 - 94230402 30533164 30533163 30533284 63697119 63697118 63697239 121 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA ..:x..:..:...........::.:.:......:...xx.x..:.:..x:.::.xxx....x.:...--....x.:..:..x:..:..:......:.:..x:xx:..:.:..:..:..x.. 67M2I52M 77/119 64.7% 121/94230402 0.0% 2/119 1.7% 39094347 NA +3073 chr4 + 190214555 69627556 69627555 69627625 70 GAGAGAGAGAGAAAGAAAGAGAGAAAGAAAAAAAGAAGAAAGAAAAGAAAGAAAGAAAG----AGAAGAAAGAA chr4 - 94230402 44400495 44400494 44400568 49829835 49829834 49829908 74 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:...:.:.:::..:...::.......:....:..........x.::x:...:x...----....:.x:... 59M4I11M 49/70 70.0% 74/94230402 0.0% 4/70 5.7% 25227061 NA +3070 chr4 + 190214555 69634236 69634235 69634310 75 CTCCATCTCAAA-----AATCAAACAAAACAAAACAAAACAAAACAACAACAACAACAAAAACCCACAACACTGATCACA chr4 - 94230402 15003702 15003701 15003781 79226622 79226621 79226701 80 CCCTATCTCACACAAATAAACAACCAACCAAAACCAAACCAAAACAACAACAACAACAAAACACCAAAAAACCTCCCACA .:.:......x.-----..x...x...xxx...x....x......................xx...x..x..:xx:.... 12M5I63M 57/75 76.0% 80/94230402 0.0% 5/75 6.7% 54630534 NA +3057 chr4 + 190214555 69635818 69635817 69635869 52 TCCACCTCACCAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAT chr4 - 94230402 85416484 85416483 85416535 8813868 8813867 8813919 52 TTCACCTGAATTAAATGTTAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAAAT .:.....x.x:x...x:xx............................:.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% -15780666 -78449736 +3172 chr4 + 190214555 69635837 69635836 69635875 39 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAATAAGGTT chr4 - 94230402 67652106 67652105 67652144 26578259 26578258 26578297 39 AAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATT ............:....................x..:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 1983731 NA +3285 chr4 + 190214555 69637861 69637860 69637987 127 AGAGAGAATGAAGGAAGAAAAGTAAAAAAGGAAGGAAGGCAAGAAGGAAGGCAGGCAGGCAGG----CAGGCAGGAAGGAAGGAAGG----AAAGAAGGAAGGAAAAAAAGGAAGGAAAAAAGGAAGGCAAGAAG chr4 - 94230402 56098387 56098386 56098520 38131883 38131882 38132016 134 AGAGAGG-TGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAG ......:-...:.x::.x....x.:...:.xxxx..::..x:.:.::...x.:.:x::..x..----..::...:.:.:.x:..::.----....x......:...........:::x..:...::..x..:... 7M1D55M4I20M4I44M 79/126 62.7% 134/94230402 0.0% 9/126 7.1% 13539474 NA +3045 chr4 + 190214555 69637940 69637939 69638003 64 AAGGAAAGAAGGAAGGAAAAAAAGGAAGGAAAAAAGGAAGGCAAGAAGGAAGGCAGGCAGGAAG chr4 - 94230402 51550814 51550813 51550877 42679526 42679525 42679589 64 AAAAGAAGAATGGAGGAAAAAGAGGGGGAAAAAAAAAAAAACAAGCAGGAAAACCCACAAAAAG ..:::.....x.:........:...::.:......::..::....x.....::.xx:..::... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 18087126 NA +3290 chr4 + 190214555 69693830 69693829 69693922 93 TTGAGTTATTTTGTTGGTGTGTGTTTGTTTTTTGTTTGTTTGTGTGTTTGTTTTGTTATGTTTTTTGAGACGAAGTTTCACTCTTGTTGCCCA chr4 - 94230402 29206404 29206403 29206484 65023919 65023918 65023999 81 TTTGGTTTTGTTATTGATGTTGGTTT------------TGTGTGTGGTTGTTTTGTTTTGTTTTTTTAAGCGAATCTTTATTCTTGATGGCCA ..x:...x.x..:...:...xx....------------.x......x..........x........x.::....x:..:.:.....x..x... 26M12D55M 61/81 75.3% 81/94230402 0.0% 12/81 14.8% 40487426 NA +3021 chr4 + 190214555 69706179 69706178 69706253 75 ATAGAGATTCTTTAAAACAAAACTTCCTTTCAAAGTTGTAATAAAAAGAAATAAAACAAACAATTATTATTCTGT chr4 - 94230402 9056057 9056056 9056131 85174272 85174271 85174346 75 ATGTAAATTTTATAAAGGACAGCCTTATGTTAAAGTTGTAATAGAAATAATTAAAACTTGAGATTATAATTCTGT ..:x.:...:.x....:x.x.:.:.:x.x.:............:...x..x......xx:x:.....x....... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 60650122 NA +3417 chr4 + 190214555 69762970 69762969 69763041 72 CCAAGAATGATCAATGAAAAAAAAAAAATAAAATAAGAACTACAAAAAAAAAAAAAAAAAAG---ATGCTGCCAA chr4 - 94230402 61010155 61010154 61010227 33220176 33220175 33220248 73 CCAAGAATTCTAAAT--AAGAAAAAGCATGTAATAAAAACTACCAAAAAAAAAAAAAAAGAGCTAACGCTACCAA ........xx.x...--..:.....:x..:x.....:......x...............:..---.:...:.... 15M2D45M3I10M 57/70 81.4% 73/94230402 0.0% 5/70 7.1% 8752815 NA +3929 chr4 + 190214555 69792634 69792633 69792738 105 TATATATATACACACACACACATATATAAATATAT-AAATGTATATAAATATATATAAAT----------ATATGTATAAATACATATAAGCATATATATATATATATATATATAT chr4 - 94230402 21704674 21704673 21704788 72525615 72525614 72525729 115 TATATATATGTACACACACACACACACACGTGTATAAAATGTA-ATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .........::...........:.:.:.x:.:...-.......-...:..:.:x..:.x.----------.xx.x....x..:x......:x..........:.....:...:x.. 35M1I7M1D16M10I46M 78/104 75.0% 115/94230402 0.0% 12/104 11.5% 48087960 NA +3929 chr4 + 190214555 69792634 69792633 69792738 105 TATATATATACACACACACACATATATAAATATAT-AAATGTATATAAATATATATAAAT----------ATATGTATAAATACATATAAGCATATATATATATATATATATATAT chr4 - 94230402 21701101 21701100 21701215 72529188 72529187 72529302 115 TATATATATGTACACACACACACACACACGTGTATAAAATGTA-ATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .........::...........:.:.:.x:.:...-.......-...:..:.:x..:.x.----------.xx.x....x..:x......:x..........:.....:...:x.. 35M1I7M1D16M10I46M 78/104 75.0% 115/94230402 0.0% 12/104 11.5% 48091533 NA +3100 chr4 + 190214555 69817238 69817237 69817310 73 TTAGGCTTTAGCCTTCAGCAAGAAGGCCATATATATATATATGTGTGTGTGTATATATATATATATATATGTA chr4 - 94230402 15949035 15949034 15949107 78281296 78281295 78281368 73 TCAGGCATATGACTTAGGTTAAAAGGCAATTTATATATATATATGTGTGTGTGTGTATTAATACACCCATATA .:....x.xx.x...x:.:x.:.....x..x...........:.........:.:...xx...:.:x:..:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 53868203 NA +3499 chr4 + 190214555 69817250 69817249 69817352 103 CTTCAGCAAGAA---GGCCATATATATATATATGTGTGTGTGTATATATATATATATATATGTATATATATATATATGTATATATATATATGTGTATATATATATA chr4 - 94230402 81401268 81401267 81401373 12829030 12829029 12829135 106 CTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .......x....---..xx.x.x.x....x.x.....x.....x..x.x.......:...x.x:..:..:..x:.:...:.:....x..:.x::...:x..:..:. 12M3I91M 71/103 68.9% 106/94230402 0.0% 3/103 2.9% -11584018 -82646384 +3010 chr4 + 190214555 69817320 69817319 69817364 45 ATATGTATATATATATATGTGTATATATATATATATTTCTTTTTT chr4 - 94230402 42757855 42757854 42757899 51472504 51472503 51472548 45 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTT ......:..x:...........x.......:.......x:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 27059465 NA +3194 chr4 + 190214555 69862477 69862476 69862514 38 CAAAAAAAACCCAAAAAACAAACAAACAAACAAAAAAC chr4 - 94230402 51198564 51198563 51198601 43031802 43031801 43031839 38 CAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAAC ...........x......:................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 18663913 NA +3339 chr4 + 190214555 69862478 69862477 69862513 36 AAAAAAAACCCAAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 59709223 59709222 59709258 34521145 34521144 34521180 36 AAAAAAAACCCAAAAAACAAACAAACAAACAAAAAA .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 10153255 NA +3132 chr4 + 190214555 69872571 69872570 69872618 48 TGGCCTATATTGATTTTCTGGGATTTTTGTTTGTTTGTTGTTGTTTTT chr4 - 94230402 59937393 59937392 59937440 34292963 34292962 34293010 48 TAGCCTTCATTATTTTTCTGGTGTTTTTGTTTGTTTGTTTTTGTTTTT .:....x:...:x........x:................x........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 9935178 NA +3234 chr4 + 190214555 69899852 69899851 69899922 71 CTCCCAGGTTCAAGTGATTGTCCTGCCTCAGTCTCCCAAATAGCTGGAATTACAGGTGCCCGCCACCATGT chr4 - 94230402 18197139 18197138 18197207 76033196 76033195 76033264 69 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGT ..:.::..........x..xx.xx.x.....:..::...:.........:....x...--.:....::... 58M2D11M 51/69 73.9% 69/94230402 0.0% 2/69 2.9% 51702713 NA +3132 chr4 + 190214555 69919555 69919554 69919601 47 TAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAATGAACTCTAAATGA chr4 - 94230402 93865321 93865320 93865367 365036 365035 365082 47 TAAGAGAAAAAAAAAAAAAAAGAGTAGGAAAAGTGAATTCTAGGTGA ...:.:.................:x.:.....:....:....::... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% -23945766 -70284636 +3921 chr4 + 190214555 69964707 69964706 69964918 212 TTTTCTATATTTTATAAGTAATATAAACTTTACTAGTTTTAT-----TACTAATCTA--CTAATATATAT----AATA--ATTTTATATACGAATGTATAATTACAATGCT---AATTTATATACTAATATACTAATATATACTAATACTAATTATACTAGTTTTTATACTCATTTCTATACTATAAATATACT-ACATACTGG---TATACTTTTATA-------TACTAATTTTTAA chr4 - 94230402 50890396 50890395 50890630 43339773 43339772 43340007 235 TTCTTTCTCTGCTATAAGTTTTATGAA---TACAGATTTTTTGAAGATACTGAACTAAACTGATATTTAGTAAAAATACTATTTTATA-ACTCATGCAGCACTATAATTTTTTAAGTTCAAATATAGGAATAAACATATATACTAATAATAGTAATACTCATTTCTATACGTATTTCAAAACATCAAATAAACTAATATAATTGATTTGCATTTTTATAGCCTTGTCACTAATTTATAA ..:.:.x.x.x:.......xx...:..---...x::....x.-----....:.x...--..:....x..x----....--........-..xx...:.xx.:..:...x:.---.:..:.x...:x::x...xxx.............x..:.x.....x:...:.....x:.....x.x..xx:.....x...-.:...x.x.---.::.:.......-------:........x... 27M3D12M5I10M2I11M4I4M2I8M1D22M3I80M1I9M3I12M7I13M 148/208 71.2% 235/94230402 0.0% 31/208 14.9% 19074311 NA +3136 chr4 + 190214555 70061316 70061315 70061365 50 TTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTGTTGGTGGAGACAGGGTTT chr4 - 94230402 37235831 37235830 37235880 56994523 56994522 56994572 50 TTCTTTTTTTTTTGTTGTTTTGTTTTGTTTTGGTGGTGGTGGTGGGGTTt ..:.x......x.x..................x......x.:::...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 32825485 NA +3029 chr4 + 190214555 70079894 70079893 70079969 76 CATAAACTTACAG-TGCAAATAAAGAAAAAAATATATATATACACACACACATATATATACATGTATATACATATAT chr4 - 94230402 71167173 71167172 71167241 23063162 23063161 23063230 69 CATAAAGTCATGGCTGTAAAAAAAAAAAAA--------TACACACACACACATATATATATATATAATTACAAGTAT ......x.:.::.-..:...x...:.....--------..:...................:..:..xx....x:... 13M1I16M8D39M 54/68 79.4% 69/94230402 0.0% 9/68 13.2% -1087279 -93143123 +3530 chr4 + 190214555 70079938 70079937 70080053 116 ACACACATATATATACATGTATATACATATATATATATATATAAAATCTCAACTCTTTCTTCCCCTCAACTTTCACATCACTGAATTCCAAATAAATATTTAAAATCAAATTTAAA chr4 - 94230402 44322483 44322482 44322594 49907809 49907808 49907920 112 ACACGCATATGTACATATGTATAGACCTATGTATACATCTATCAAGACCTACCCCACTCCTTCCCTTTAGGTTCATGCTA--GCATCaaaaataaataaataaa--caaataaaaa ....:.....:..:.:.......x..x...:....:..x...x..:x.::.x.:.x:..:.:....:x.xx....::::.--.x..:xx.........xx....--.....xx... 80M2D22M2D10M 76/112 67.9% 112/94230402 0.0% 4/112 3.6% 25757455 NA +3005 chr4 + 190214555 70080787 70080786 70080843 57 TCATGGATCCAGTCAACACTTACTGTATGTTCATAAAAACTGGAAATTATCTTGTGT chr4 - 94230402 31601486 31601485 31601542 62628861 62628860 62628917 57 TCAAGACTCCAGTCAACATTTATTGCAAATTCATTAAAATTAGGAATTAATTTGTAT ...x.:x...........:...:..:.x:.....x....:.:.:.....x:....:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 38479301 NA +3052 chr4 + 190214555 70082319 70082318 70082377 59 CTCAGAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 58307446 58307445 58307504 35922899 35922898 35922957 59 CTCAGGGAAAAAAAAAAAAAGGGGGGAAATATAAAAAGGGGGAAAAAAAAAGGAAAAGA .....::.............::::.:.:.x.x:.....:::::....:...:....... 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 11774873 NA +3059 chr4 + 190214555 70082346 70082345 70082402 57 GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAACAAAAAAGAAAGCTGAA chr4 - 94230402 91846563 91846562 91846619 2383784 2383783 2383840 57 GAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGTCAAGTAAACTAAA ....:.....:....:....x.......:.:::.....:...:xx...x..:..:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% -21764217 -72466185 +3336 chr4 + 190214555 70089671 70089670 70089759 89 AAAAAATAAAAAATAAAATTAAAAATAAAAACAAGAGAAAAAGA---AAAAGAAAAGAAAAGGAAAGAAAGAAAAGAAGAAAAGAAAAGAAA chr4 - 94230402 51684912 51684911 51685003 42545400 42545399 42545491 92 AAAGTACAAAAAATAATGCTAAAAGTAAAAATATGAGATAATAATTCTAAAAAATATATATGGGAAAAAAAAAAAAAAGGAGGAAGGAGAAA ...:x.:.........x::.....:......:.x....x..x:.---x...:..x.x.x.x..:..:...:....:...:.:::.::..... 44M3I45M 61/89 68.5% 92/94230402 0.0% 3/89 3.4% 18404759 NA +3023 chr4 + 190214555 70089685 70089684 70089766 82 AAAATTAAAAATAAAAACAAGAGAAAAAGAAAAAGAAAAGAAAAGGAAAGAAAGAAAAGAAGAAAAGAAAAGAAAAGAAAAA chr4 - 94230402 28315451 28315450 28315532 65914871 65914870 65914952 82 AAAATTCCAATTTGTTACAAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGGAAAGAACAA ......xx..x.x:xx......x.....:.x...:x...:x.:x.:...x..:...:x:....:.....x..:......x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 41774234 NA +3114 chr4 + 190214555 70089697 70089696 70089746 50 AAAAACAAGAGAAAAAGAAAAAGAAAAGAAAAGGAAAGAAAGAAAAGAAG chr4 - 94230402 82177855 82177854 82177904 12052499 12052498 12052548 50 AGAAACAAGGGGAAAAAAAAGAGAAAGGAAATAGAAAGGCAGAAAAAAAG .:.......:.:....:...:.....:....x:.....:x......:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -12088158 -82142244 +3016 chr4 + 190214555 70125193 70125192 70125285 93 TTTAACCATTCACTATATATATATACTCAGTAGGTAGGGCATGAAGCTCACATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 16373814 16373813 16373906 77856497 77856496 77856589 93 TTAAACCCTTTTTTGAATATATATATTTAAAATGTCCTACAAGTAGGCCATATTTATATAGATACACAAATATTTATAGACATTTATGTATGT ..x....x..:x:.:x.........:.:.:x.x..xxx:..x.x..x:..:..x......x...:.:.x....x....x.:..x...:...:. 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 53751379 NA +3264 chr4 + 190214555 70125240 70125239 70125315 76 TCACATATATATATATATATATATATATATATATATATATATATATATGTATATATATATGTGTGTGTGTGTGTGT chr4 - 94230402 71630130 71630129 71630205 22600198 22600197 22600273 76 TCACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ....x..::.::..::.....:.:.:.:.x.....:....x.x.:....:..:.:.x.:::....x:.:....... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% -1504890 -92725512 +3185 chr4 + 190214555 70125258 70125257 70125310 53 ATATATATATATATATATATATATATATATGTATATATATATGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.......x.:.....:.x:..:............ 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 50420984 NA +3316 chr4 + 190214555 70125260 70125259 70125312 53 ATATATATATATATATATATATATATATGTATATATATATGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.......x...:...:.x:............... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 50420986 NA +3199 chr4 + 190214555 70161152 70161151 70161223 72 CACTGTATATATATATATATATATATATACACACATACATATATATACACGTATACATATATATATATATAT chr4 - 94230402 48167033 48167032 48167104 46063299 46063298 46063370 72 CACCTTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT ...:x.:.......xxx:......:....:.x........:x.:..:::.x:.....:..:..:.:..:... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 21994119 NA +3223 chr4 + 190214555 70191325 70191324 70191405 81 GGGAAGGAGAAAGGAGTGGAGAATAAGAAAGAAAGACAAGATAGCAATTTTTTTGTTTTTTGTTTGTTTGTTTTTTGTTTG chr4 - 94230402 28792606 28792605 28792681 65437722 65437721 65437797 76 GGGAACTTGAGAGAAGAAGAGGAAAATAGAGAAAGAAAA-----CAACATACTGTTTTTTTGTTTGTTTGTTTTTTGTCTG .....xxx..:..:..x:...:.x..x.:.......x..-----...:x.x:.xx.......................:.. 39M5D37M 57/76 75.0% 76/94230402 0.0% 5/76 6.6% 41398719 NA +3030 chr4 + 190214555 70191372 70191371 70191412 41 TTTTTTTGTTTTTTGTTTGTTTGTTTTTTGTTTGTATTTTT chr4 - 94230402 20380499 20380498 20380539 73849864 73849863 73849904 41 TTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTT ..x.............................xx.:..... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 49810873 NA +3099 chr4 + 190214555 70224787 70224786 70224840 54 CACACACACACACACACACACACACACACACACACACCTGTCATCCCCATCCCT chr4 - 94230402 43966806 43966805 43966859 50263544 50263543 50263597 54 CATACACACACAAACGCACACATATACAAATACGTACTTATTATGCCCATCTCT ..:.........x..:......:.:...x.:..::..:.:.:..x......:.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 26257981 NA +3066 chr4 + 190214555 70253795 70253794 70253857 63 TCAAAAAAAAAA------AAAAAAAAAAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAGACATAAATAGA chr4 - 94230402 32280596 32280595 32280664 61949739 61949738 61949807 69 TCAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGA .....:x....:------.........................:...x.xx.:...::...x::..:.. 12M6I51M 49/63 77.8% 69/94230402 0.0% 6/63 9.5% 37973199 NA +3103 chr4 + 190214555 70334271 70334270 70334373 103 GTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAAT--------AAAATAAAATAAAAATAAATGAAAAAAAAAAAAACAAAAAACAAAAAAAGAAAAAAAAAAAAAAA chr4 - 94230402 28864555 28864554 28864665 65365738 65365737 65365848 111 GTTCCTTAGCAATGAAAGAGTAGAAAATGAATTAGAGCTCTCGTTCAACATAAAGTCAAGCTAATTAAAAAAAAATAAATCAGAAAACAAAACAAACAAACAAACATAAAA ..x..:..:x.x.x.:..x:..:x...x:..x..:.::--------..x.....:.x..:x...x.:........x...x..:.........x..:x...x...x.x.... 38M8I65M 70/103 68.0% 111/94230402 0.0% 8/103 7.8% 41469716 NA +3270 chr4 + 190214555 70334288 70334287 70334362 75 GTATAATAAAAAAAAT----AAAATAAAATAAAATAAAAATAAATGAAAAAAAAAAAAACAAAAAACAAAAAAAGAAAA chr4 - 94230402 91489892 91489891 91489970 2740433 2740432 2740511 79 GTCTGATAAATAAAATCATAGAAATAGAAAAAAATAAATAGAGCAAAAAAAAAAAAAACCCAAAAACAGAATGAGAGAA ..x.:.....x.....----:.....:..x........x.x.:xx:............x.x.......:..x:...:.. 16M4I59M 57/75 76.0% 79/94230402 0.0% 4/75 5.3% -21155604 -73074798 +4019 chr4 + 190214555 70366606 70366605 70366879 274 TATCTGATTTAAAATTATTTACTTCTTTGTTTCCACAGCCTGGTGAG--AGTCAAAGAGGCCCCAGGGGACCATATCCACC------TGGACCACTGGCTCCTCCTCCTCCACCATGTTTTCCTTTTGGAACAGGATTTGTTCCACCACCCCATCCTCCACCCTATGGTCCAGGGAGATTTCCACCACCCCTTTCTCCACCCTATGGTCCAGGGAGAATCCCACCATCCCCTCCTCCACCCTATGGTCCAGGGAGAATTCAATCACACTCTCTTCCTCCTCC chr4 - 94230402 88284440 88284439 88284707 5945696 5945695 5945963 268 TGCCTGGTGGAACAGTAGTTCCTCCTGCGCCTCCGCTGCCTGGTGGAGCAGCCGTAATTCCTCCT-----CCGCCTCCGCTGCCTGGTGGAGCAGCCGTAATTCCTCCTCCGCCTCCGCTGCCTGGTGGAGCAGCCGTAATTCCTCCTCCGCCTCCGCTGCCTGGTGGAGCAGCCGTAATTCCTCCTCCGCCTCCGCTGCCTGGTGGAGCAGCCGTAATTCCTCCTCCGCCTCCTCTGCCTGGTGGAGCAGCCGTAATTC---------CTCCTCCTCCTCC .::...:.xx..x.x..x..x..:..x:.::...:.x........::--..:.:x.:xxx.:..x-----..::x...:.:------....x..x:x.:xx:.........:..x:xx:.x...xx....:...xxx.x:....x..x..x.x...x.::..:x:...xx...xx:x.x....x..x..x.:.:.x.::..:x:...xx...xx:x...:..x..x:.x.......::..:x:...xx...xx:x.....---------...:......... 47M2I16M5D11M6I173M9D13M 154/260 59.2% 268/94230402 0.0% 22/260 8.5% -17917834 -76312568 +3476 chr4 + 190214555 70381422 70381421 70381483 62 AGGGCAGGAGGGAAGGAGGGAAGGAGAGAGGGGAGGGAGGGGAGGGAGGGGAGGGGAGGGGA chr4 - 94230402 7707309 7707308 7707370 86523033 86523032 86523094 62 AGAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ..:.::.:....::.xx...:......:.:.............x....:..::.::.:.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 62674113 NA +3007 chr4 + 190214555 70390964 70390963 70391024 61 TAATACTTAATAAACTTCCATATATATATATATATATAGACACACACACACACACACACAT chr4 - 94230402 44683436 44683435 44683496 49546907 49546906 49546967 61 TAATTAATAGTAGACTTCTAGAGACATCTATGTTGACAAACATACACACACACACACACAT ....xxx..:..:.....:.x.x.:..x...:.xx.:.:...:.................. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 25707528 NA +3281 chr4 + 190214555 70390991 70390990 70391056 66 ATATATATATAGACACACACACACACACACACATATATATATACACATACATATATATATACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::x.........:..............x..x:.x..x:.::...:.xx:....:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 3486144 NA +3082 chr4 + 190214555 70391008 70391007 70391072 65 CACACACACACACACATATATATATACACATACATATATATATACACATACATATATATATACAC chr4 - 94230402 7596412 7596411 7596476 86633927 86633926 86633991 65 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ..:...x.::..:...x..:..........::...:....:.x...:....x..:::.:::..:. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 62794596 NA +3338 chr4 + 190214555 70391021 70391020 70391113 93 ACATATATATATACACATACATATATATATACACATACATATATATATACACATACATATATATATTCCTTTAGTTCTGTCCCTCTAGAGAAC chr4 - 94230402 17520749 17520748 17520838 76709565 76709564 76709654 90 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAA--CACATGCATATATATACCCCACTGG-TCTATTCCATCAGACAAC ...x.......x.....x.:.:.:...:..:::x..:.x.:....x.--.....:..........::..x:.:.-...:.:..x::...x... 47M2D25M1D18M 63/90 70.0% 90/94230402 0.0% 3/90 3.3% 52870272 NA +3125 chr4 + 190214555 70445009 70445008 70445076 68 CTGGGTGACAGAGACTCTGTCTAAAAAACAAACAAACAAAACAAAACAAAAACAAACAAAAACAAAAC chr4 - 94230402 33205647 33205646 33205713 61024690 61024689 61024756 67 CTGAGTGCCA-AGTTTACCTCTTAAAAACAAACAAACAAAAAAAAACCAATACCAAAAAAAAAAAAAC ...:...x..-..x:.x:x...x..................x.....x..x..x..x.....x..... 10M1D57M 53/67 79.1% 67/94230402 0.0% 1/67 1.5% 37239362 NA +3163 chr4 + 190214555 70445027 70445026 70445073 47 GTCTAAAAAACAAACAAACAAAACAAAACAAAAACAAACAAAAACAA chr4 - 94230402 43796986 43796985 43797032 50433371 50433370 50433417 47 GCTTAAAAAAACAACAAACAAAACAAAACAAAAACCAGCAACAACAA .::.......xx.......................x.:...x..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 26648041 NA +3083 chr4 + 190214555 70467627 70467626 70467695 69 AACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACATATACACCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:....x.xx.:...:x.:..::x.x....:.......x.....x:...:...:....:.x.:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 54084056 NA +4004 chr4 + 190214555 70479129 70479128 70479196 68 TAATTGAATGACTTTGGGCAAGTCACTTAATATGCCTGGATCTCAGTTTATTCATTTATGAAATGATT chr4 - 94230402 11947212 11947211 11947279 82283124 82283123 82283191 68 TAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATT ...:..x:....:..:..:x...........x......x:..:......x::...x............ 68M 53/68 77.9% 68/94230402 0.0% 0/68 0.0% 58531917 NA +3056 chr4 + 190214555 70516337 70516336 70516424 88 TATACGTATATATATACATATATATGTATATATATACATGTATATATATACGTATATATATATATACGTATATATATATATATATATA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ....:::x:..xx.......x......::..:x...:..x..x:...........xx.x.x.xx.x:.:.:..::.x...:....... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 57713551 NA +3104 chr4 + 190214555 70516342 70516341 70516407 66 GTATATATATACATATATATGTATATATATACATGTATATATATACGTATATATATATATACGTAT chr4 - 94230402 48167039 48167038 48167104 46063299 46063298 46063364 66 GTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT ........xxx.......:.:....x.:.......x.:..:.::x.:..:.:..:..:.:.:.... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 22349303 NA +3167 chr4 + 190214555 70548663 70548662 70548711 49 GAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTCC chr4 - 94230402 54317735 54317734 54317783 39912620 39912619 39912668 49 GAATGATGTTGTCTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTTGCCC ..:.xx......:x..x............................x:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 16230928 NA +3007 chr4 + 190214555 70548670 70548669 70548707 38 GTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTT chr4 - 94230402 79435100 79435099 79435137 14795266 14795265 14795303 38 GTTTTTGTTGTTGTTGTTGTAGTTGTTTGTTTGCTTTT ...x................x............:.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% -8886430 -85343972 +3219 chr4 + 190214555 70561505 70561504 70561575 71 CTGTACTGCTATTTCTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTTGCTCTGTCGC chr4 - 94230402 5847625 5847624 5847695 88382708 88382707 88382778 71 CTGTGTGGTTATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ....::x.:....x:x:..:.x.x::...:.........:.::...........xx.........:x.:.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 64713880 NA +3289 chr4 + 190214555 70574621 70574620 70574682 62 TTTGGGGTTGTTTTTTGTTTTTTTTTTTTTTTTTGCCATCTAACACCTGTGTCCACACAAAA chr4 - 94230402 8959379 8959378 8959440 85270963 85270962 85271024 62 TCTGAGGGTTTCTTCTCTTCTTTTTTTTTTTTCTGCCATTTACTATCTGTGACCGCACCAAA .:..:..x.x.:..:.x..:............:......:..x:.:.....x..:...x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 61615242 NA +3025 chr4 + 190214555 70583361 70583360 70583424 64 ATATATATGTGTATATATGTATATACATATATATGTGTATATGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x..:::......:.......:x.:.:.....x:..:............x:.x.xx.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 50879087 NA +3074 chr4 + 190214555 70588863 70588862 70588912 50 TATATGTTATATATGTATATATGTTATATATGTATGTATATATACACATA chr4 - 94230402 65119362 65119361 65119411 29110992 29110991 29111041 50 TATATCTTATTCAAGAATATTTGATACATATGTATGTATATATACACATA .....x....x:.x.x....x..x..:....................... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 5469501 NA +3617 chr4 + 190214555 70589014 70589013 70589132 119 ATATATAAAATGTATATATACATATATATGCATATATACATACATATATACAT----ATATATAAAATATATGTGTATGTGTATA-TATATATAAAA----------TATATGTATTTATATAAAGTGAAAACA chr4 - 94230402 12217105 12217104 12217238 82013165 82013164 82013298 134 ATTTCTAAAAAGGAGATATATGTATACATGCATATATGCATACATATACAAATTTTACTGTGCAAAGTTTGTGTTCTTATGCAGACTCTATATGAAGATGGACACTTTATAAGCAGTGAGATAAAATAAAAGCA ..x.x.....x.x.x.....::....:..........:..........:.x..----x.:.::...:.x.:...x:x.:..:.x.-.x.....:..:----------....x.:.x.x.x.....:.:...:.. 53M4I28M1I11M10I27M 84/119 70.6% 134/94230402 0.0% 15/119 12.6% 58371909 NA +3513 chr4 + 190214555 70621929 70621928 70622020 92 ATAAATATTAT-TGTATTATATATAATATATTATAAATATATAATATAATATAAATATATTATATTATA----TATTTATAAATATATATATTATAA chr4 - 94230402 83778399 83778398 83778495 10451908 10451907 10452004 97 ATAAACTGTATCTTTATAATTTATAATATGTCATAAATCTATAACAAAATATAAAGGTAATATATTATAAAGGTAATTACAACTGTGAAGATGATAA .....:xx...-.x...x..x........:.:......x.....:.x........x:..x.........----..x...:..x.:.:x.x..x.... 11M1I57M4I24M 70/92 76.1% 97/94230402 0.0% 5/92 5.4% -13156470 -81073932 +3110 chr4 + 190214555 70622718 70622717 70622787 70 TATAATATAATATATAATATATAGTATATATAATATATTACATATAATATATGATTTATATTATATATAT chr4 - 94230402 44197641 44197640 44197710 50032693 50032692 50032762 70 TACAATCTCCAATATATTATATAGTATATATAGTGCTTGGGATATAGTATAGTATTTATACTACAGATAT ..:...x.xxx.....x...............:.::x.x:x.....:....xx.......:..:.x.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 26425077 NA +3140 chr4 + 190214555 70624718 70624717 70624807 90 CACTGTGATCTAGTTTCCTTTTTTCTTTTTCTTTCTTTTTATTTTCTTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATGGAGTT chr4 - 94230402 50985344 50985343 50985428 43244975 43244974 43245059 85 CAGTGTAATATAATTTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTT-----CTCTTTATTCTTTTTTTCCCTGAAAAAGAGCT ..x...:..x..:....:.....:.xx...x.:.::.....x.......x:..-----:.:...x..:.......:::.:.:.x:...:. 53M5D32M 58/85 68.2% 85/94230402 0.0% 5/85 5.9% 19639374 NA +3152 chr4 + 190214555 70633868 70633867 70633937 70 TTTTCTTGTTTTTTATTTTTTGTTTACAGTCTCACTTCCTTTATCTTATTTTTGTTTTTTCTCTTCTTCA chr4 - 94230402 40339556 40339555 40339625 53890778 53890777 53890847 70 TCTTCTGATTTTTCCTTTGCTGCTTTGCATCTCTCTTCATTTATCTGATTTTCATTTTTTCTCTTTGTTA .:....x:.....:x...x:..:..xxx:....x....x.......x.....::...........:x.:. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 30294312 NA +3671 chr4 + 190214555 70648967 70648966 70649040 74 TGCAACCTCCACCTCCTGGATTCAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAC--GCACCAC chr4 - 94230402 18197127 18197126 18197202 76033201 76033200 76033276 76 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC .:..:..:xx.x..:....:....:.:.x...x.xx.x........::...........:.......--....... 67M2I7M 56/74 75.7% 76/94230402 0.0% 2/74 2.7% 52451840 NA +3039 chr4 + 190214555 70649301 70649300 70649353 53 TCCCGGGTTCAAGGGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACA chr4 - 94230402 18197140 18197139 18197192 76033211 76033210 76033263 53 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .:.:.........x.x...x.xx.x........:..:.........:.:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 52452161 NA +3275 chr4 + 190214555 70678880 70678879 70678992 113 TTTCCTTTTCCTGTATATTATCTGCTAATTCCTGTTTCAGAATCTTTTTTAGTTTGTCATTTTCCTTACCATAAATTTATTTCTCTTTCCTTCCTGTTCATCCTCATAAAAAA chr4 - 94230402 86374821 86374820 86374930 7855473 7855472 7855582 110 TCTCATTTTCAAGAACATT---TGGTATTTGTTGTTACAAAAGCTCTTTTAGTCTTGTATCTGACTTAGAATAACTTTTTTTTTTTTTTTTTTCAATTAAATCCCAGAAAAAA .:..x.....xx.x.:...---..x..x..x:....x..:..x..:.......:.xx:..:.xx....xx....x...x...:.:...::..:.x:..x.x:.:..x...... 19M3D91M 73/110 66.4% 110/94230402 0.0% 3/110 2.7% -15695941 -78534461 +3576 chr4 + 190214555 70683384 70683383 70683490 107 ATCTATGCAGGACTGTGGTGA-----TGAAGCATATGAATTTGATCCTATAGACCAAGCTTGTCCAACCCACAGCCTGCAGGCCATATGCAGCCCAGGAGAGCTTTGAATGC chr4 - 94230402 10959620 10959619 10959729 83270674 83270673 83270783 110 ATCTAT--AGGATAGTGAAGAAGGAGTGGAGCTTCTAAAACAGATACACCAGACCAAGCATGTCTAACTCACAGTCCACAGGCTGCATGCAACCTGGCACAGCTCACAGTGC ......--....:x...:x..-----..:...x.x.:..x:x...x.xx:.........x....:...:.....:.::.....:::.....:..::.x.x....:xx.:... 6M2D13M5I86M 72/105 68.6% 110/94230402 0.0% 7/105 6.7% 59723764 NA +3087 chr4 + 190214555 70692344 70692343 70692386 43 TTGGTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATGG chr4 - 94230402 62187356 62187355 62187398 32043005 32043004 32043047 43 TTAATGTTTTTTTTTGTTGTTTGTTTGTTTGTTTCTGAAATGG ..::..........xx..................:...:.... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 8504988 NA +3160 chr4 + 190214555 70698236 70698235 70698274 39 CAAAAAAAAAAAAAGAAGGAGAAGAAGAACCAGAAAGAG chr4 - 94230402 61793097 61793096 61793135 32437268 32437267 32437306 39 CAAAAAAAAAAAAAGAAGAAGAAGAAGAGCCAGGAGGAG ..................:.........:....:.:... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 8905139 NA +3107 chr4 + 190214555 70699490 70699489 70699574 85 TATATATATATATGTATATATATGTGGGTGTGTGTGTGTGTATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGT chr4 - 94230402 9312516 9312515 9312600 84917803 84917802 84917887 85 TGTATATCTATATCTATATATCAGTGTGTGTGTGTTTTTGTCAGTAGATAAATGTTTTATTTAGTGTATTAGGGTGTTTTTTTGT .:.....x.....x.......xx...x........x.x...xx:..x...x..:....xx.xx......xx.x....x.x.x... 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% 61386974 NA +3009 chr4 + 190214555 70699493 70699492 70699541 49 ATATATATATGTATATATATGTGGGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::.....:..xx....x...x................x:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 66293070 NA +3280 chr4 + 190214555 70699510 70699509 70699580 71 TATGTGGGTGTGTGTGTGTGTATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:...x:..::.:.::::::.:.x.....:.............::.:...x..::....x:.:....... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -930625 -93299777 +3054 chr4 + 190214555 70699518 70699517 70699613 96 TGTGTGTGTGTGTATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTT chr4 - 94230402 81401300 81401299 81401395 12829008 12829007 12829103 96 TGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAGTGCCTTTTTGTT .....x.....x..x.x.......:..xxxx...::....x..........:.:x:...x::...:x..:..:.x.x.x:x.x:.::x.....x.. 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% -10701782 -83528620 +3210 chr4 + 190214555 70699530 70699529 70699632 103 TATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAT-------ATATATTTTTTTTTTTTTTTTTTTTTTAGACA chr4 - 94230402 40224641 40224640 40224750 54005653 54005652 54005762 110 TATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACA ....:....:..xx.......:::xxx:x:::x:.x.x...............:........x...:....-------.....x...x..xx..:.x:x..:x...x... 71M7I32M 70/103 68.0% 110/94230402 0.0% 7/103 6.8% 30474889 NA +3127 chr4 + 190214555 70699530 70699529 70699571 42 TATATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTG chr4 - 94230402 19704285 19704284 19704326 74526077 74526076 74526118 42 TATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ......::.........x.......x:............... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 50995245 NA +3052 chr4 + 190214555 70699532 70699531 70699607 76 TATATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATT chr4 - 94230402 40224641 40224640 40224716 54005687 54005686 54005762 76 TATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTT ....:....:..x:...x.:..::xxx.x:::x:.x.x...........:...:........x...:....:.:.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 30474891 NA +3262 chr4 + 190214555 70699534 70699533 70699620 87 TATATATATATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 19559264 19559263 19559347 74671056 74671055 74671139 84 TGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA---ATTTTTGTATATTCTt .::..x.x..x....x.x.:xx...x.x.x.x..............................:.xx..---......x.x.x..:.. 68M3D16M 63/84 75.0% 84/94230402 0.0% 3/84 3.6% 51140270 NA +3270 chr4 + 190214555 70699536 70699535 70699618 83 TATATATATTTTTGTATGTGTATG------TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 57691380 57691379 57691468 36538935 36538934 36539023 89 TATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ....:x.::.:.:...x...:..:------.......:..:x..........:..x....:x...x.....x.xx....x:x....... 24M6I59M 60/83 72.3% 89/94230402 0.0% 6/83 7.2% 13008156 NA +3154 chr4 + 190214555 70699542 70699541 70699611 70 TATTTTTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTT chr4 - 94230402 50558499 50558498 50558568 43671835 43671834 43671904 70 TGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTT .::...:x.xx...:......x..........::........:..:....x.:.x.x.x.x:.x...... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 20141043 NA +3178 chr4 + 190214555 70699548 70699547 70699613 66 TGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTTTTT chr4 - 94230402 32959570 32959569 32959635 61270768 61270767 61270833 66 TGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGTT ....:x.:..::..x....x.....::...:.......:.......:.x......x:..xx..x.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 37739978 NA +3005 chr4 + 190214555 70699557 70699556 70699597 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -19121724 -75108678 +3036 chr4 + 190214555 70699560 70699559 70699599 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -19121722 -75108680 +3158 chr4 + 190214555 70699572 70699571 70699627 56 TGTGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::.:.x.....:...:..:.:..........x....:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -22035776 -72194626 +3224 chr4 + 190214555 70699574 70699573 70699625 52 TGTGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ..::.:.x.....:...:..:.:...............:.x.........:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -22035774 -72194628 +3132 chr4 + 190214555 70699576 70699575 70699627 52 TGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ..::...x.....:...:..:.:........x......:.x.........:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -22035772 -72194630 +3159 chr4 + 190214555 70701069 70701068 70701140 72 AAAGTTTTAAAATATATTTTTAAGTATCTATCTGTAAGATCACCAAAGGATTTTTTGTTTGTTTGTTTTTTT chr4 - 94230402 68676841 68676840 68676912 25553491 25553490 25553562 72 AAAATTTGAAAGGAAATTCTTCAGTCACCATTTGGCAGGTGACAAATTGGTTTTTTGTTTGTTTGTTTTTCT ...:...x...:x.x...:..x...xx.:..:..xx..:.x..x..xx.:....................:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 2024228 NA +3282 chr4 + 190214555 70710643 70710642 70710712 70 CTGGGCAACAAGAGTGAAACTCCATCTCAAAAAACAAAAAAAAAGAAAAAGAAAACAGTATACCTGGTCA chr4 - 94230402 48944160 48944159 48944229 45286174 45286173 45286243 70 CTGTGTACCAAGAAAGAGATTTAATAACAGAACACAAAAAAAAGAAAAAAGAAAACAATACAACTGTCCA ...x.:.x.....:x..:.:.:x..xx..:..x..........::............:..:.x...x:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 21766483 NA +3191 chr4 + 190214555 70715574 70715573 70715638 65 AGTAACACTATCTCCAAAAAAAAAAAAAAAAAAAAAAAAAGCTACCCTTTCATGCTAACAGCAAC chr4 - 94230402 50705308 50705307 50705372 43525031 43525030 43525095 65 AGTAACACTGTCTCTTGAAAAAAAACCAAACAAACAAAAAGCCAACCCCTCTCCCGAACAACAAC .........:....:x:........xx...x...x.......:.x..::..x:x.x....:.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 20010266 NA +3441 chr4 + 190214555 70726945 70726944 70727054 110 AATTTAGGGAAACATGTACCACCATTGAAATAACCTCTCAGA-----------------CTTTTGTTTGTTTGTTTGTTTTACTTTGTGAAAGCGTAGTGGGA---------TTTCTTTCCTTTTTTTTTTTTTTT chr4 - 94230402 26881429 26881428 26881564 67348839 67348838 67348974 136 AGTTTATGGGGACATGAAAAACTTCTCAAGAAACTTTTTGGAGATAAACCTGGTCTGGTTTTTTGTTTGTTTATTTGTTTTTTTAAGTGGAGGCAGAACTCTACGTTCCCCCTTTCTTTCCTTTTTTTTTTTTTTT .:....x..::.....x.xx..:x:.x..:x...:.:.::..-----------------:............:........x:.xx...:.:..:x.::xxx.---------........................ 42M17I44M9I24M 78/110 70.9% 136/94230402 0.0% 26/110 23.6% 43845516 NA +3225 chr4 + 190214555 70733048 70733047 70733106 59 CAGAGTGAGACTCCATTTCAAAAGAAAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAG chr4 - 94230402 55704975 55704974 55705033 38525370 38525369 38525428 59 CAAAACAAAATACTGTTCCAAAAAAAAAAGAGAGAGGGAGAGAAAAAGAAGAGGGAGGG ..:.:::.:.:x.::..:.....:...:........:......:.:..:....:...:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 15028073 NA +3060 chr4 + 190214555 70733110 70733109 70733169 60 GAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ..:...:...x..:...:...:.......:.::...:::.:...:.:...:.x.x.:... 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% -6452967 -87777435 +3221 chr4 + 190214555 70765851 70765850 70765911 61 CTCCCGGGTTCAAGCGATTCTCCTGCCACAGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.........:.x...x.xx.x.x......::::.........:......x.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 52568712 NA +3083 chr4 + 190214555 70774593 70774592 70774674 82 TGACAAAGCAGGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATAT--ATATATATAAAA chr4 - 94230402 59607247 59607246 59607330 34623073 34623072 34623156 84 TGAAAAAACAATGCCTAATATTAAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAA ...x...:..:x:.::x::x.:....::.....xxxx:.x.:.......:....:.:......:......--.........:.. 70M2I12M 56/82 68.3% 84/94230402 0.0% 2/82 2.4% 11167346 NA +3152 chr4 + 190214555 70774630 70774629 70774706 77 AAAAAAAAAAAAAAAATATATATATATATATATATATATATAAAATAAACA--TTCAATCTTCGTGAAACCCTTTTTAA chr4 - 94230402 69437739 69437738 69437817 24792586 24792585 24792664 79 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGTTCTTTCTCACACTGTTTTCAA .........x......x.:x...................x.x.x....::.--.:::x....:x.x.x..:x....:.. 51M2I26M 57/77 74.0% 79/94230402 0.0% 2/77 2.6% 1336891 NA +3034 chr4 + 190214555 70787168 70787167 70787207 40 GAAAAAAAAAAAAAAAAAAAATATATATATATATATATAT chr4 - 94230402 69437738 69437737 69437777 24792626 24792625 24792665 40 GAAAAAAAAACAAAAAAAACCTATATATATATATATATAT ..........x........xx................... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 1349430 NA +3017 chr4 + 190214555 70787171 70787170 70787209 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 1349432 NA +3056 chr4 + 190214555 70821640 70821639 70821700 61 AGTAATAGAATGAATGTCCGTGTTTTTTTGTTCCTTTTTTTTTTTTTTTTTTGAGACAGAG chr4 - 94230402 21338253 21338252 21338313 72892090 72892089 72892150 61 AGCAATAAGATAATTGGTTATGTGTTTTTATCTCTTTTTTTTTTTTTTTCCTGGGGCGGGG ..:....::..:.x..x:::...x.....:.::................::..:.:.:.:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 49483387 NA +3643 chr4 + 190214555 70821734 70821733 70821829 96 TGGCACCATCTCAGTCACTGCAACCTCCGCCTCCCAGATTCATGTGATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGAACTACAGACATGCACCAC chr4 - 94230402 18197114 18197113 18197202 76033201 76033200 76033289 89 TGGCATCATGTT-----CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC .....:...x.:-----..:..:..:xx:x..:.::.:....x...x...x.xx.x.........:.x...............--..:........ 12M5D66M2D11M 66/89 74.2% 89/94230402 0.0% 7/89 7.9% 52624620 NA +3209 chr4 + 190214555 70830441 70830440 70830502 62 TGTCTTAAAAAAAAAAAAAAAACACACACACACACAGAGAATTATGGACATAACAATCAAAT chr4 - 94230402 62846374 62846373 62846435 31383968 31383967 31384029 62 TGTATTAAAAAAAAAAAAACAACAAACACACACACACAAACCCCCAGATATTGAAATCAAAT ...x...............x....x...........x.:.x::x::..:..x:x........ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 7984067 NA +3855 chr4 + 190214555 70856380 70856379 70856456 77 CTGCAACCTCTGCCTTGTGGGTTCAAATGATTCTCATGCCTTAGCCTCCCTAGTAGCTGGAATTACAAGTGCACAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x...x.........:..x...x..x.x..:.....::.x...........:....x......x.. 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 52659254 NA +3281 chr4 + 190214555 70859672 70859671 70859749 78 CTGCAACCTCCGCCTCCCGCGTTCAAGCGATTCTCATGCCTCAGCCTCTCTAGTAGCTGGGATTACAGGCCCGCACCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:..:..:xx:x..:.:.x.......:.x...x..x.x........:..x.........:.:....--.x:...... 67M2D9M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 52662546 NA +3160 chr4 + 190214555 70867767 70867766 70867816 50 CTGGCTTTTTTTTTTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 3335139 3335138 3335188 90895215 90895214 90895264 50 CTGATCCTTTTTTTTTTTTTTTTTAATGTGTGTGTGTGTGTCAATGTTTG ...::::.................::...............xx:...x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 67532628 NA +3008 chr4 + 190214555 70874263 70874262 70874304 42 GAAAAGAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAATATA chr4 - 94230402 2781193 2781192 2781234 91449169 91449168 91449210 42 GAAAAGAAGAAGAAAAAAAGAATGAAAGAAAAGAACAAGATA ........:..:..........x............x..x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 68093070 NA +3080 chr4 + 190214555 70878496 70878495 70878557 62 CTGTCTCTTTAAAAAAAAAAAAAAAAAAATTCCAAAAATTAGCTGGTCATGGCCAGGCATGG chr4 - 94230402 56564739 56564738 56564800 37665603 37665602 37665664 62 CTATTTCTCTGAAAAGAAAAAAAAAAAAACTCTGAAAAGTGGCTAACTAGCACTAGGCCTGG ..:.:...:.:....:.............:..::....x.:...::::.xx:.:....x... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 14313757 NA +3379 chr4 + 190214555 70880170 70880169 70880214 45 TTTTGTTGTTGTTGCTGTTTGTTTGTTTGTTTTTTGAGACGGAGT chr4 - 94230402 64800068 64800067 64800112 29430291 29430290 29430335 45 TTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCCTGAAACATAGT ..............:.................::...:..:x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 6080102 NA +3486 chr4 + 190214555 70880262 70880261 70880343 82 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTACCTCAGCCTTCTAAGTAGCTGGGATTACAGGCACATGCCACTAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGT ..:..:..:xx:x..:...........:.x...x.xx:x.........::..........:.:....x.::..--.....:. 73M2D7M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 52683136 NA +3737 chr4 + 190214555 70888778 70888777 70888860 83 CTGCAACCTCTGCCTCCTGGGTTCAAGGAATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGAATTACAGGCATGCGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........x:x...x.xx.x.........:.............:....--.:...:....:::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 52691652 NA +3031 chr4 + 190214555 70891490 70891489 70891535 46 TTGAATGACTGGGGTTTTTTTTTGTTGTTGTTGTTTTGTTTTGTTT chr4 - 94230402 14023426 14023425 14023471 80206932 80206931 80206977 46 TTGGGAGACCCAGTTCTTTTTTTGTTGTTGTTGTTTTGTTTTGTTT ...::x...:x:.x.:.............................. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 56868064 NA +3339 chr4 + 190214555 70894351 70894350 70894427 77 CTGCAACCTCCGCCTCCCGGGTTCAAGTGAATCTACTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGC-CCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACT ..:..:..:xx:x..:.:...........xx..xxxx.x........::.............:....x.:..-..... 72M1I5M 56/77 72.7% 78/94230402 0.0% 1/77 1.3% 52697225 NA +3183 chr4 + 190214555 70896683 70896682 70896749 67 CCTGGAACTTCTGAACTCAGGCACTCCTTCTGCCTTGGCTTCTCAAGTAGCTGGGACTACAGGTGCA chr4 - 94230402 18197132 18197131 18197198 76033205 76033204 76033271 67 CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:::.:......:::...:.::..:.x:xx.x..::..:.:............:......x..... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 52699551 NA +3043 chr4 + 190214555 70899187 70899186 70899236 50 ATATATATACATATACATACACACACACACACATTTCCCTCTTTTTTTTT chr4 - 94230402 8681930 8681929 8681979 85548424 85548423 85548473 50 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTT .....x...:.....::..::........:....x.xx............ 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 62217257 NA +3314 chr4 + 190214555 70908101 70908100 70908183 83 CTGCAACCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCACCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.:.......x.:xx...x.xx.x........:..:.........:......--.::x......::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 52710975 NA +3047 chr4 + 190214555 70933502 70933501 70933565 64 AGAGTCAAATAGTTCTATAGGGCTTGTAATAAAAATAACTCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4446552 4446551 4446615 89783788 89783787 89783851 64 AGAAAAAAAGACTTGTATAAGACTTGTATGCTCAATAGCTCTCTCTTTTTTTTTTTTTTTTTTT ...:xx...x.x..x....:.:......xxxxx....:....:.:................... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 66486950 NA +3311 chr4 + 190214555 70937600 70937599 70937658 59 CTCCCAAGTTCAAGTGATTCTCATGTCTCAGTCTCCCAAGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:::.........x...x..x.x.....:..::...........:......x.::. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 52740461 NA +3845 chr4 + 190214555 70938260 70938259 70938354 95 TCCTGGTATGATTATCTTTTCAGGTCCTTATACATGGTGTGGTCAGATTTGCCGCCCCCGCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAGAGCT chr4 - 94230402 65683031 65683030 65683122 28547281 28547280 28547372 92 TCCTTATTTGTTTATCTATTTATTTAACCATACATATGACAATTA---CTGCCCCCCTCTCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAATCT ....x:.x..x......x..:.xx.xx::......:xx::::.:.---:....x...:.x..............................:.x.. 45M3D47M 66/92 71.7% 92/94230402 0.0% 3/92 3.3% 5255229 NA +3602 chr4 + 190214555 70963762 70963761 70963865 104 GTGAGTTGTGATTGCACCACTGCTCTCTAGCCTGGGTGACAGAGTGAGACTCCAT-----CACAAAAGAAGAAAAAAACAAAACAAAAAAAACCCCAAACAAACACACC chr4 - 94230402 64675527 64675526 64675623 29554780 29554779 29554876 97 GTAAGTCATAGGTGCTCCATTGC------------ATAACAGTGCAAAATACCATGTTCAAATAAGGGAAGAAAAAAACAAAACCAAAAAAATCACAAACAAACATATC ..:...::.::x...x...:...------------:.:....x.::.:.:x....-----x.:..::.................x.......:.x..........:.:. 23M12D20M5I49M 67/92 72.8% 97/94230402 0.0% 17/92 18.5% 6288235 NA +3226 chr4 + 190214555 71006096 71006095 71006167 72 ATCTCAAAAAAAAAAAAAACAGAAAAAACAAAAACACCAAAAAAAAAAAAAAAAAAGCAAATAAGAAAAAGA chr4 - 94230402 75231109 75231108 75231178 18999225 18999224 18999294 70 ATATCAGAGAAAAAAAAAA--AAAAGAACAACAACAACAAAAAACCCTAAAAAAAAGCAGGCATGGAGAAGA ..x...:.:..........--:...:.....x....x.......xxxx...........:::.x.:.:.... 19M2D51M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% -4225013 -90005389 +3223 chr4 + 190214555 71006108 71006107 71006170 63 AAAAAAACAGAAAAAACAAAAACACCAAAAAAAAAAAAAAAAAAGCAAATAAGAAAAAGAAAA chr4 - 94230402 25255651 25255650 25255713 68974690 68974689 68974752 63 AAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAA ..:.....x...x.:.x:..::...x...................x:.x.:.::..x...... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 45750457 NA +3211 chr4 + 190214555 71038989 71038988 71039071 83 CTGAAGCCTTGAATTCATGGGTTCAAGCGATCCACCCACCCCAGCCTCTCGAGTAGCTGGGTCTATAGGCACATGCCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:x....:x:.::.:x..........:.x.:...xx:x.:......:..:.........:x...:.x.::..--.....:.. 73M2D8M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 52841863 NA +3057 chr4 + 190214555 71041833 71041832 71041898 66 ATTTATTTTTATTTACTTCAAAATATTTTAAAATGTCTCTTGAGAGGTTTGTTTGTTTGTTTGTTT chr4 - 94230402 7958181 7958180 7958243 86272160 86272159 86272222 63 ATTTACTTGT---TACTACAAAATTTTTAAGTATGTATTTTCAGATTTTTGTTTGTTTGTTTGTTT .....:..x.---....x......x...x.:x....x.:..x...xx................... 10M3D53M 51/63 81.0% 63/94230402 0.0% 3/63 4.8% 63083652 NA +3257 chr4 + 190214555 71115374 71115373 71115435 62 ACACAAACAAACAAACAAACAAACAAAAAAGAGCAAACAAAACAAAACAAAACAAAAAACCC chr4 - 94230402 44550964 44550963 44551025 49679378 49679377 49679439 62 ATAAAACCAACCAACCAAACAAACAAAAAAGACCAAATGAAACCAAACAAATAAAAACATTC .:.x..x...x...x.................x....::....x.......xx....x.::. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 26564410 NA +3516 chr4 + 190214555 71152949 71152948 71153052 104 ATATATGTGTGTGTGTGTATATATATGTAAATATATATGTGT---ATATA------TAAATATATATGTGT-----ATATATATAAATATATGTGTGTGTATATATATATATATATAT chr4 - 94230402 40224674 40224673 40224791 54005612 54005611 54005729 118 ATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACAT ..x.x...............:.....:......:........---.....------.:.x.x.::..x::.-----.:...x:...x..x....xxx...x.....:.x..:.:.:.. 42M3I5M6I15M5I42M 77/104 74.0% 118/94230402 0.0% 14/104 13.5% 30928275 NA +3606 chr4 + 190214555 71168271 71168270 71168339 69 TCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTCCAGGCCCACGCCACTGTG chr4 - 94230402 18197140 18197139 18197206 76033197 76033196 76033263 67 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG .:.............x...x.xx.x........::.............:.x..x.:x..--........ 59M2D8M 54/67 80.6% 67/94230402 0.0% 2/67 3.0% 52971131 NA +3878 chr4 + 190214555 71195179 71195178 71195276 98 AGATTTTCT-TACCCAAAGACTGAT----GTTCTTTTCCTTTTTTCCTGTATTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAGCTTATGGGGGTCTTG chr4 - 94230402 61467013 61467012 61467115 32763288 32763287 32763390 103 AGCTTTTCTGTACCTATAAACTGATTTATGCTCTTTTTTTTTTTCCCATAATTTGAGGGTTTTTTTCTTTTTCTTTTTTTTCACAAGTTTGGGAAAGGTCTTG ..x......-....:.x.:......----.:......::.....:..xxx.......xx.......:.....:........:.x.::x:.x:x:::....... 9M1I15M4I74M 71/98 72.4% 103/94230402 0.0% 5/98 5.1% 9728166 NA +3195 chr4 + 190214555 71240174 71240173 71240273 100 ATCCTATGG-ATGTTTTATTCCTAAAAAAGCCAGCCAGAATTTTGGATCTGTATGATATAAACAGATTACTTAATAGTCTCATATTTTGCAATAGGGGAAA chr4 - 94230402 13849323 13849322 13849422 80380981 80380980 80381080 100 ATTCTGTGGTCTGCTCTAAAACAAAAATATTAAGCCAAATGTTTGGCTCTGTACAATAAAAACAGATTATCTAATAGTTTC-CAGTGGGAAATATGAGAAA ..:..:...-x..:.:..xxx.x....x.x:x.....:.xx.....x......::...x..........::.......:..-:.x.xx.x....x.:.... 9M1I71M1D19M 69/99 69.7% 100/94230402 0.0% 2/99 2.0% 57390851 NA +7028 chr4 + 190214555 71253213 71253212 71253760 548 TCACTCTCTGAACTGGCCTAACTCTTTCATTAGATTGACCATGATGACACTTCCTAG----CCAGTAATCTTA---CCTTAGCATCTTATCCACCCATATAGACTGTCTATTAAATGATTTGATCAAATGT--ACTATGCAGATTTGGGTAAATATAATTTAAAAAACCTTTCTATATAACATCATATGGCAATATAGCTTAATTACCATTTTTTGCTTAGCCGCCATATTTAATAAGGTGAATAGAAAA----TATTTAATGTGATAGGTTTAAAAAAATTTTTCAACCTC-----------------------------TTAATTTGTGTGT---GTTTTCTTGAAAACAACCAAGCA-------TTTCGTGTTTGATTTATTGAAGCAATTGGTTGGCTTTGCTCACTTACATTGTTAAGACT--TGAGATAAAACTTCAGGACTCCCTC-----AGTAACTGGAGCACAGGAAACAATTGACACTGTTTCTTAATTCACATTGTTTCTGAGACATTTCCTACTTCCTAGTATAATATAGCTTTCCCATGAGAACCATTTGCTTGCAAATGGTTACACATGATAGAT---ACACTTCTCACTGGCAC chr4 - 94230402 42501474 42501473 42502040 51728363 51728362 51728929 567 TCCTCCTTTGAATCACTTTAATTCTGTGGTCAGCTTGATAATACAAACACATCATAGTAAGCCCGTAGTCTTAATGCTTTAATATGCTGCCAACAGAACTGGACAATCTCTTTAATCTTTTGACCACGTGTGCACAGTACAGATTTTGGTGATATGAAACTAAGTTGCATATACGCAGGCCAACATCTG----CATTGCTTAGCTGCTTTT-------------CCCTATTT-------TGCATGGGAGAGCCTTAGTTAACGTCAC---TTTTTGTCCTTTTCCCTGCCTCCCCACCCCCTTTTTTTTTCCCTTTTCTTTTTAATTTTTCTCTCACAGTCTGTTCAGAGTGACCAATCAAGATGTTTTCCTTTTCTGCATACTTGAAGTACTTGGC-------ATCTGTTTATGCTGTTGCAAATGCTGAGATAAA-CTTCTAGGCTCCCTTCCCAAAATGCCTGGA----AGGAAACAATTGACACATACTCTCAATGCACAAC---TTTGAGACATTTCCTACTCACTGGGCTAACAGAGCTTTCCCATGAGAACGATTCAC-TACAAATGGCAATGCCTGATAAATTTAACAGTACACACATGCAC ..x::..:....:::x::...:...x.x:.:..x....:x..:xx:....x..x...----..x...:.....---.:...::..x:.::.x..xx.xx.:...x:...x..x...xx.....:..x:...--..x:.:.......x...:.xxxx..x:...:xx:.x.x.x:::.x:x..x...x..----:..x.....::.:.:x..-------------..x.....-------..x..:.:.:.----..x....:..x.:---...xx:xxxx...::.x:....-----------------------------.......x.x.x.---:x.:.x..x.:.:::.....x..-------..:.x.x.:..xx.xx......:.x....:-------::::::...:::....:x:.x.--.........-....x:.:......:-----.:.:x.....----................xxx:...:...x....x:---.:................:x..:.xx...:.x.................x...::.-.:.......:x.::.x.....:..---...x.x.x...xx.... 57M4I12M3I55M2I56M4D18M13D8M7D11M4I13M3D22M29I13M3I23M7I30M7D22M2I9M1D15M5I10M4D34M3D56M1D24M3I17M 329/505 65.1% 567/94230402 0.0% 105/505 20.8% 28751739 NA +3246 chr4 + 190214555 71277503 71277502 71277652 150 TTTTCCTTCCCTTTTCCTTCCTTCCTTCCTTCTCTTTTTCTTTCTTTCTCTTT-CTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTCTCCTTCCTTCCTT--CCTTCCTTCCTCTCTCTCTCATTCACTTCTCTCTC chr4 - 94230402 69667744 69667743 69667896 24562507 24562506 24562659 153 TTTTTCTTTTGATCTGTTTTGTTTCTGTTTTGGCTTTTCAGTCTCATATCATAATTCATGTTCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTCCACCCACCCATACCATTTCCATCTCTTTCCTTTGCTTACTGCTTTGTC ....:...::xx.:.x:..:x..:..x::..xx.....:xx.:::x.x..x.x-:..x.x....::::...x.:.:..::..:..xx.....:.............x:..x:..x.--.x..:.:x:....:..::.:::.:...x..:.x.. 53M1I62M2I35M 88/150 58.7% 153/94230402 0.0% 3/150 2.0% 1609759 NA +4181 chr4 + 190214555 71277551 71277550 71277716 166 TCTTTCTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTCTCCTTCCTTCCTTCCTTCCTTCCTCTCTCTCTCATTCACTTCTCTCTCCTTCTTTCTCTGTTTTTCTTTCTCTTTTTCTCTCGCTCTGTCTTTTTCTGTTGAGTTTTCAGAG chr4 - 94230402 28459063 28459062 28459214 65771189 65771188 65771340 152 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGT--TTTCACTCTAATTC--TTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTC----------TCTTTTTTTCCTCAGTCTTCTAAG ..x..:.:.....x:.xx...:x..x:.x.:...:x.x:.:...x..:x:.......:.:.:....xx.x..:x.--.:..x....x....--....:..::..xx...:.x..:......:...:..x...----------.......:.x:.x...:...x:.. 75M2D14M2D39M10D24M 101/152 66.4% 152/94230402 0.0% 14/152 9.2% 42818488 NA +3742 chr4 + 190214555 71277553 71277552 71277698 146 TTTCTCTTTTTCT---TTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTCTCCTTCCTTCCTTCCTTCCTTCCTCTCTCTCTCATTCACTTCTCTCTCCTTCTTTCTCTGTTTTTCTTTCTCTTTTTCTCTCGCTCTGTCTTTT chr4 - 94230402 28459066 28459065 28459211 65771192 65771191 65771337 146 TTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTC---CTCAGTCTTCT ...:.:....x..---..:x..x:.x.:...:x.x..:...x...x:......:..:.:....xx.x..:x.::.:x....xx:...:x..:x..::xx.:.::x.x:..:...x.:...:x..........:..---...x.....:. 13M3I119M3D11M 90/143 62.9% 146/94230402 0.0% 6/143 4.2% 42818487 NA +3034 chr4 + 190214555 71376026 71376025 71376131 106 AAACTACATATATATACATATATACACGTATATATATATACATATACACGTATATATATACATATATACGTGTGTATATATATATACGTTTGTGTATATATATATA chr4 - 94230402 12802769 12802768 12802873 81427530 81427529 81427634 105 AAGCCACATAAAGTCAT-TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ..:.:.....x.xx:.:-.......x.:.xx...:...x.:..:.:..:.x......x..x:.........:.xx.x.x.xx.x.:.::x..::x...:....... 17M1D88M 68/105 64.8% 105/94230402 0.0% 1/105 1.0% 58573257 NA +4062 chr4 + 190214555 71376028 71376027 71376188 161 ACTACATATATATACATATATACACGTA-TATATATATACATATACACGTATATATATACATATATACGT-GTGTATATATATATACGT-TTGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACACACACAC chr4 - 94230402 14964723 14964722 14964884 79265519 79265518 79265680 162 ATTACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACA--TGCACACACACACAC .:...x:...x..::...x.....x..:-.:x::.:x....x.x.::.:.x.:..:.:x..x.x.x:.:x-...:..x......x.x..-.....x.:.:.x....::x.:.:::.::.:..x.....:....:...xx........--::............. 28M1I41M1I18M1I57M2D15M 103/159 64.8% 162/94230402 0.0% 5/159 3.1% 56411305 NA +3099 chr4 + 190214555 71376057 71376056 71376133 77 ATATATATACATATACACGTATATATATACATATATACGTGTGTATATATATATACGTTTGTGTATATATATATACA chr4 - 94230402 19704274 19704273 19704350 74526053 74526052 74526129 77 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ..x..x.........:..........x.:::...:.x.:.....:.:.:.:.:x.:x..x....x.x.xx..x.... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 51671783 NA +3172 chr4 + 190214555 71376101 71376100 71376175 75 ATATATATATACGTTTGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...::..x::.:x.:..:...x......:::..::x...x.xx...:.:.............x..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 62980313 NA +3975 chr4 + 190214555 71376105 71376104 71376179 75 ATATATACGTTTGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:::.x....:...x.:..:..:x....:..:...:...::..xx...................x..... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 62980317 NA +3631 chr4 + 190214555 71376116 71376115 71376197 82 TGTGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .....:...:.:.::.:.x...::...x...x.:.:...::x:...:xx.:.................x.....x.::x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 62980327 NA +3884 chr4 + 190214555 71376118 71376117 71376199 82 TGTATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:...:.:.:....x....:...x:x::...:...:.x:...:xx.:.................x.....x..:x... 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 62980329 NA +3322 chr4 + 190214555 71376120 71376119 71376200 81 TATATATATATACATACACATATATACCTGTATATATACACACACACACACACACACACACACACACACACACATATATAT chr4 - 94230402 8395789 8395788 8395869 85834534 85834533 85834614 81 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT .:.:.:...:.::::.:.x.:..:..::.::....:..::.x:...:xx.:.................x.....x..:x.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 62980331 NA +3146 chr4 + 190214555 71376166 71376165 71376217 52 CACACACACACACACACACACACACACATATATATGTGTGTATATATATTTT chr4 - 94230402 87372747 87372746 87372798 6857605 6857604 6857656 52 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ..x...........x.........:x:...::.....::........x.:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -15996581 -78233821 +3520 chr4 + 190214555 71376168 71376167 71376222 55 CACACACACACACACACACACACACATATATATGTGTGTATATATATTTTTTGAG chr4 - 94230402 87372747 87372746 87372801 6857602 6857601 6857656 55 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAG ..x...........x.........:x....::.:...:::.........:..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% -15996579 -78233823 +3239 chr4 + 190214555 71376170 71376169 71376218 49 CACACACACACACACACACACACATATATATGTGTGTATATATATTTTT chr4 - 94230402 87372747 87372746 87372795 6857608 6857607 6857656 49 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT ..x...........x..........x....:..:....::.....x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% -15996577 -78233825 +3114 chr4 + 190214555 71385170 71385169 71385222 53 TTTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 70265139 70265138 70265191 23965212 23965211 23965264 53 TTTAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG ....x......x...........x.xx.:............::.:...x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 1120031 NA +3220 chr4 + 190214555 71466917 71466916 71466987 71 ACCAACAAGACGGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGGTCTGAGT chr4 - 94230402 82145322 82145321 82145392 12085011 12085010 12085081 71 ACCAGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAGTGGGGTCTGTGT ....:::..:x...::......:....:.........::..x..:.x.:x:::..::..x.:......x.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% -10678405 -83551997 +3207 chr4 + 190214555 71531776 71531775 71531829 54 CACACACACACACACACACACACACACACAGAAAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.x.:....................... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 3879692 NA +3037 chr4 + 190214555 71531778 71531777 71531831 54 CACACACACACACACACACACACACACAGAAAGAGAGAGAGAGAGAGAGAAAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:...:.................:.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 3879694 NA +3060 chr4 + 190214555 71531780 71531779 71531831 52 CACACACACACACACACACACACACAGAAAGAGAGAGAGAGAGAGAGAAAGA chr4 - 94230402 67652084 67652083 67652135 26578268 26578267 26578319 52 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA .....::...x...:...:..xx.x.:...:.:...............:... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 3879696 NA +3275 chr4 + 190214555 71535840 71535839 71535885 46 TGGAGAGTAAAA-CAAACAAACAAAACAAACAAACCAACAAAAAAAC chr4 - 94230402 85674682 85674681 85674728 8555675 8555674 8555721 47 TGAAAAGTAAAAACAAACAAACAAAACGAACAAAACAACAAAAAAAC ..:.:.......-..............:......x............ 12M1I34M 42/46 91.3% 47/94230402 0.0% 1/46 2.2% -14138842 -80091560 +3217 chr4 + 190214555 71536958 71536957 71537023 66 ATACATATCC-TTTCTTATATGTATATGTATATGTATACACACATATACATATACATATCCTTTCTT chr4 - 94230402 8681913 8681912 8681979 85548424 85548423 85548490 67 ATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTT ..:x......-.x...x....:x....:.........:......:.........xx.x.::...:.. 10M1I56M 51/66 77.3% 67/94230402 0.0% 1/66 1.5% 62855045 NA +3422 chr4 + 190214555 71537376 71537375 71537473 98 ATATACATATGTGTGTGTATATATTATACATATATGTGTGTATATATACATATATGTGTGTGTGTGTGTATATATAGAGAGAGAGAGAAAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGAC----CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .......:.::..:.:::.x.:----:.:...x....:.x..x.x:.:::::.:.....:.:::::.:....:.:.............x.....x... 22M4D72M 60/94 63.8% 94/94230402 0.0% 4/94 4.3% 38138596 NA +3543 chr4 + 190214555 71537391 71537390 71537480 90 TGTATATATTATACATATATGTGTGTATATATACATATATGTGTGTGTGTGTGTATATATAGAGAGAGAGAGAAAGAGAGAGAGAAGCCC chr4 - 94230402 65737668 65737667 65737757 28492646 28492645 28492735 90 TGCATATATGCAGTATGCACGTATGCATCCATAGGCAGGTGTTTGTGTGTATGCCAATGTATAGAGGGAGAGAGAGCAACAGAGAAGTCC ..:......xxx::..::.:..:..:..x:...x::.x:...x.......:..:xx..:..x....:......:..x:.x.......:.. 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 5799723 NA +3400 chr4 + 190214555 71589053 71589052 71589147 95 TCTCTTTCTACTTTAAAAATTATCTCTCTCTCTCTCTTATTTTTTACTTTTG--------------------------ACAATTTAATTACAGTATGTCTCACTGTAAACCTTTTTGGGTT chr4 - 94230402 56232435 56232434 56232551 37997852 37997851 37997968 117 TCTTTTCTCTCTTAAAAGATTATTTCTCTCTCTCTCTTTTTTTTTTTTTTTAATGTAATCAAAATTTTTGTGCATTTTACATTTTAATTAGAAAGT-TCTCACTTTAAAC---TTTGGGTT ...:..:::x...x...:.....:..............x......x:....:--------------------------...x........x.:x:.-.......x.....---........ 52M26I18M1D13M3D8M 73/91 80.2% 117/94230402 0.0% 30/91 33.0% 15356618 NA +3074 chr4 + 190214555 71589515 71589514 71589568 54 TTGTATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTC chr4 - 94230402 5847636 5847635 5847689 88382714 88382713 88382767 54 TTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTC ....::....x.x:..............:.::.........x.xx....:.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 65741879 NA +3210 chr4 + 190214555 71595295 71595294 71595375 81 TTCTTGGCAAAAAAAAAAAAAAAAATCCAAAAATGTTATCATTCCATAAATGACCCATGGAAAGACTAATAATGACTATTT chr4 - 94230402 59823840 59823839 59823920 34406483 34406482 34406563 81 TTCTTGAAAAGAAAAGAAAAAGACATTAAAAAAAGATAACATCCCAGAAATGAGCCATCAAAAGCAAAATGAGATGTATTT ......:x..:....:.....:.x..:x.....x.x..x...:...x......x....x:....xxx...:.x:xx..... 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 11771455 NA +3038 chr4 + 190214555 71598275 71598274 71598335 61 TTAGAAACAACAACAACAACAACAACAAACCCAACCAACCAACCAACCAAATAACCAACAA chr4 - 94230402 53041001 53041000 53041061 41189342 41189341 41189402 61 TTTAAAATAACAACAACAACAAAAAAAATCCACCCAAACCAACCAACAAAACAAACCACAA ..x:...:..............x..x..x..xxx.x...........x...:..x.x.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 18557274 NA +3299 chr4 + 190214555 71652671 71652670 71652736 66 AGAGCTATTTAGGTAAAATAGTGGTGGCAAAAGCTTGATTGGGTAGAGTTAAAGACAAAATGGAAG chr4 - 94230402 57710501 57710500 57710566 36519837 36519836 36519902 66 AGAGCTATTTGGTCAGAACAGGGAGGGCAGATGCTTGACTGGGGAGAATTAATGGCTGAAAGGAAG ..........:.x:.:..:..x.:x....:.x......:....x...:....x.:.x:..x..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 13942170 NA +3096 chr4 + 190214555 71696845 71696844 71696895 51 AGGTTTTTTTGTTGGTTTGTTTGTTTGTTTTTTGAGACAGGGTCTCACTCT chr4 - 94230402 50147692 50147691 50147742 44082661 44082660 44082711 51 AAGTTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCT .:........x...x..................xx.....::x.:...:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 21549153 NA +3206 chr4 + 190214555 71709247 71709246 71709342 96 CACTTGGTCATGGTATATATATATATATACACACACACATATATATATACACACATATATATATATACTCAATTTGCTAATATTTTGTTGAAGATT chr4 - 94230402 85546015 85546014 85546104 8684299 8684298 8684388 90 CATTTTGTCACAGTAGCTATTTATATATATACACACAC------AGATACACACATAGAGCTATATGTATTATTTCTGAAAAATCTGTTAAGAACT ..:..x....::...xx...x........:........------.x...........x.xx.....::x:x....x:x..x.x.:....:.::.:. 38M6D52M 63/90 70.0% 90/94230402 0.0% 6/90 6.7% -13836768 -80393634 +3366 chr4 + 190214555 71755251 71755250 71755320 70 CTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTACCTGGGATTATAGGCGCCCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...........:.x...x..x.x........::.:....x....:.:..:.--..:x......::.. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 53558112 NA +3319 chr4 + 190214555 71788648 71788647 71788737 90 CAGAAAGGGAGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAGAAAAAAAGAAAAAGAAAGAATGAGAAAGAAAGAAAGAAATTGAAAATA chr4 - 94230402 7739258 7739257 7739347 86491056 86491055 86491145 90 CAGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAACA ....::.::.:.x...:..:::.::::...:...............x:x:::.::.:..xxx...:...:...:...:...x.x:...:. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 64049390 NA +3241 chr4 + 190214555 71811801 71811800 71811879 79 CTGCAACCTCTGCCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTTTCAAGTAGCTGGGATTACAGGCAGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:.::........:xx...x.xx.x.....................:.:....x.::--...... 71M2D6M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 53614675 NA +3455 chr4 + 190214555 71816089 71816088 71816168 80 TAAAGAAACTG-----TGGTGTACATATATATATATACACACACACATATA----TATACATATATATATATACACACAC-ATATATATA chr4 - 94230402 37363023 37363022 37363112 56867291 56867290 56867380 90 TGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:..:...:..-----.x.........:x.:........::....x.....----.:..:..:.:...:...x.......-....:.... 11M5I35M4I25M1I9M 63/80 78.8% 90/94230402 0.0% 10/80 12.5% 34453066 NA +3554 chr4 + 190214555 71816101 71816100 71816214 114 GGTGTACATATATATATATACACACACACATAT----ATATACATATATATATATACACACACATATATATACATATATATATACACACACATATATATACATATATATACACACACA chr4 - 94230402 89016081 89016080 89016198 5214205 5214204 5214322 118 GATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .:...:..:.:..x.::..:.........:.x.----.:.:....::.x..::......::.x..:.:.:.:..x.:.:x.:::.......:x..:::.:.x:..:x::....x::.. 33M4I81M 68/114 59.6% 118/94230402 0.0% 4/114 3.5% -17199980 -77030422 +3408 chr4 + 190214555 71816106 71816105 71816169 64 ACATATATATATATACACACACACATATATATACATATATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x.:...x.:.......:..:.:x..::x.:....x.....::........... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 54295357 NA +3225 chr4 + 190214555 71816123 71816122 71816206 84 CACACACATATATATACATATATATATATACACACACATATATATACATATATATATACACACACATATATATACATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::::...:.:.:....x.:..:...x:...:.::...::x.....xx...:.:.........:.:.x.:...x..:x... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 63420336 NA +3177 chr4 + 190214555 71816127 71816126 71816188 62 CACATATATATACATATATATATATACACACACATATATATACATATATATATACACACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:.:.x..::.:.:.x..:...........:...:....:.x.:.....:x...:...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 64219715 NA +3308 chr4 + 190214555 71816155 71816154 71816216 62 CACACATATATATACATATATATATACACACACATATATATACATATATATACACACACATA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x..::.....x..:...........:...:....:.x.:.....:x:..:...::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 64219743 NA +3288 chr4 + 190214555 71816160 71816159 71816223 64 ATATATATACATATATATATACACACACATATATATACATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.....:.x.:.:.x.......:....:.:x..:.x.:....x.....::........... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 54295411 NA +3297 chr4 + 190214555 71816181 71816180 71816242 62 CACACACATATATATACATATATATACACACACATATATATACATATATACATATATACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x..::...:.x..:...........:...:....:.x.:......x..:::..:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 64219769 NA +3457 chr4 + 190214555 71816190 71816189 71816307 118 ATATATACATATATATACACACACATATATATACATATATACATATATACACATATATACATATATATACATATATACATATATATACACATATATACATATATACACATATATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATAAAC ..x..x.........:.........:.x:x.:.:.:::..:x:x:.x.:.....:...xx.x::..x..x.....:......x...x:.:..::---..:.x.:..xx.:.....x.. 94M3D21M 74/115 64.3% 115/94230402 0.0% 3/115 2.6% 67398847 NA +3037 chr4 + 190214555 71816209 71816208 71816270 62 CACACATATATATACATATATACATATATACACATATATACATATATATACATATATACATA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x..::.....x..:..:...:.:..:...:......x.:......x..:::..::. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 64219797 NA +3734 chr4 + 190214555 71816209 71816208 71816321 113 CACACATATATATACATATATACATATATACACATATATACATATATATACATATATACATATATATACACATATATACATATATACACATATATATACATATATATACACAT chr4 - 94230402 73121106 73121105 73121216 21109187 21109186 21109297 111 CATGCATATTCATACACATATAC--ACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..::.....x:.....:......--.:.x.x:...:x:......::....x:..:.::x:.....:.:x::.:.....x...:::x....x.x.:.:....:....x:..x.. 23M2D88M 71/111 64.0% 111/94230402 0.0% 2/111 1.8% -1304897 -92925505 +3331 chr4 + 190214555 71816228 71816227 71816313 86 ATACATATATACACATATATACATATATATACATATATACATATATATACACATATATACATATATACACATATATATACATATAT chr4 - 94230402 27943543 27943542 27943628 66286775 66286774 66286860 86 ATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .....:xx:.::...:..::...x:.:.::.x....::....:...:.:.x.......x..x..:.x......:..x:...::.:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 43872685 NA +3541 chr4 + 190214555 71816239 71816238 71816340 102 CACATATATACATATATATACATATATACATATATATACACATATATACATATA--TACACATATATA------TACATATATATACACATATATATATACACATATACA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:::.::..:.....x:.....:.......:.x.x::.::x:..:....:....--.....:x:....------........x....:.x:.:.x.x.:......:..:. 54M2I12M6I36M 69/102 67.6% 110/94230402 0.0% 8/102 7.8% -1304861 -92925541 +3102 chr4 + 190214555 71855018 71855017 71855144 127 AAGATGAAGAAAACTATATATATAATA-AATATAAATATACTATAAATATATAAAAAGATATACAA---ATGTATATGTGTGTAAACACATATGTACATATATGTATATGCATGTTTATGTGTATATATGT chr4 - 94230402 19704195 19704194 19704325 74526078 74526077 74526208 131 AAAACTAAGCCAACCAAATAAACAATGGAaaacaaacaaacaaagaaacaagcaaaACAGAAACAAGCAACCTGAAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ..:.:x...xx...:.x...x.:...:-..x.:...:.x..x.x:..xxx.xx....x.x.x....---.:x.:x.xxx:.x....:......:...:.....:.x.:..:.....:......:.:.:... 27M1I38M3I62M 82/127 64.6% 131/94230402 0.0% 4/127 3.1% 52150823 NA +3431 chr4 + 190214555 71862864 71862863 71862952 89 AGGCCTTATGTATATGTGTGTGTGTATATATATATATACACACACACATATATATATACACACACATATATA-TATACACACACACATAT chr4 - 94230402 50941846 50941845 50941935 43288468 43288467 43288557 90 AGGCTTTAAGCATGTTAGTCTTTAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTAT ....:...x.:..:.xx..x.x.:x..x.x.......:....x..........::..x:.:...::......-.x.:x.:...:..:... 72M1I17M 62/89 69.7% 90/94230402 0.0% 1/89 1.1% 20921018 NA +3214 chr4 + 190214555 71862869 71862868 71862986 118 TTATGTATATGTGTGTGTGTATATATATATATACACACACACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 68323951 68323950 68324068 25906335 25906334 25906452 118 TTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTAAAGAAAACCAGAGGTATTTTTGGTTATGGGAATATTCATGTTTGAATAT .........x.::.....x.......:x...x.x:::::...:.x..:..:..::..x...x....:..x.x.x.xx..x.x:...x.x.:xx...:x:x....x:..:.x.:x.... 118M 73/118 61.9% 118/94230402 0.0% 0/118 0.0% 3538918 NA +3012 chr4 + 190214555 71862870 71862869 71862928 59 TATGTATATGTGTGTGTGTATATATATATATACACACACACATATATATATACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.::.....::::::.:...:........xx......:..::.:.:........ 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 56898044 NA +3293 chr4 + 190214555 71862888 71862887 71863109 222 TATATATATATATACACACACACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATA-TATATATATATATATATACACACACACACACACACATACATGTTGGCAACAGACCACCAAATCTTGCCA--TAAACTGGCTGACACAGAAAACAATTATACTTATGGGGCATATTTATCAATCTTGGCTGGCAA chr4 - 94230402 4417346 4417345 4417563 89812840 89812839 89813057 218 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGC-TTCATGCCTGTGTACAACACACAG--AAATCTTGACAGCTTGATTACCAGTATAAGAAATCAACTGAAC----AGGAAATATTTAATAAATTTAACCAGAAA ..x.:.......:...........x:x.:...::..::x:x:.x.::.:..::.:xx.x:...x..x.....:.:....x...x.....:-:.:.x.:.:xx.:.....x..xx.xxx.::.-:x...:.x...xx:.....x..x:--........x..--.x:.:.:x.x.xxxx.....x...:.:x..----:..:x.......x:..x:..::.::.x.. 90M1I31M1D24M2D11M2I30M4D29M 129/215 60.0% 218/94230402 0.0% 10/215 4.7% 67445542 NA +3060 chr4 + 190214555 71862896 71862895 71862962 67 TATATACACACACACATATATATATACACACACATATATATATACACACACACATATATATATATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:....:.:xxx..:....:......x...:....:x.:..:.:.x..:......:..:.:..:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 23695858 NA +4039 chr4 + 190214555 71862898 71862897 71863018 121 TATACACACACACATA-----------TATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATA--TATATATATATACACACACACACACACACATACAT chr4 - 94230402 73121075 73121074 73121208 21109195 21109194 21109328 134 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTAT .:.....x....x.x.-----------.:.::..:..:.:x....:.:.........x.x:...:x:..:...::....x:..:.::x:.....:.:--..:.....x....:.x....x.x........::.. 16M11I70M2I35M 82/121 67.8% 134/94230402 0.0% 13/121 10.7% -1258177 -92972225 +3386 chr4 + 190214555 71862906 71862905 71863017 112 CACACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATACA chr4 - 94230402 89016087 89016086 89016198 5214205 5214204 5214316 112 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .......x.::..::........:.x.::::.:.....::..x..::...:.::..x..:.:.:.::.x.:.:x.::::.:.:.::x..:.:::.x..::x:.....x.:.. 112M 62/112 55.4% 112/94230402 0.0% 0/112 0.0% -17153181 -77077221 +3118 chr4 + 190214555 71862908 71862907 71862949 42 CACATATATATATACACACACATATATATATACACACACACA chr4 - 94230402 45271687 45271686 45271728 48958675 48958674 48958716 42 CATATCTATATATACACACATATATATGTATACAAACACACA ..:..x..............:......:......x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 26591221 NA +3604 chr4 + 190214555 71862909 71862908 71863015 107 ACATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA .........:.:.........x:x.:...::..::x:x::x.::.:..:...xx.x::..x..x.....:.:....x...x.....:.-....x....xx...:... 88M1D18M 70/106 66.0% 106/94230402 0.0% 1/106 0.9% 67445560 NA +3396 chr4 + 190214555 71862911 71862910 71863022 112 ATATATATATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATACATGTTG chr4 - 94230402 4417349 4417348 4417459 89812944 89812943 89813054 111 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG-CCACAAACACTAACATATAAACTG .:.......:.........:.x:x.:....:..::x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x....::-x....x....xx.....:.x::.. 87M1D24M 71/111 64.0% 111/94230402 0.0% 1/111 0.9% 67445562 NA +3325 chr4 + 190214555 71862919 71862918 71863019 101 ATACACACACATATATATATACACACACACATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATACATG chr4 - 94230402 89016082 89016081 89016180 5214223 5214222 5214321 99 ATGTGCACACATCTGC--ATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTG ..:::.......x.::--..:.........:.x.::::.:.:.:..::.x..::...:.::..x..:.:.:.::.x....x::.:.......:x..:.:.. 16M2D83M 60/99 60.6% 99/94230402 0.0% 2/99 2.0% -17153163 -77077239 +3041 chr4 + 190214555 71862944 71862943 71863020 77 CACACATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATACATGT chr4 - 94230402 54293151 54293150 54293227 39937176 39937175 39937252 77 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATAT ..x.:::.:..x...:.......:...:.:...:xxx:...:..x.xxx:.......x...::.........:..:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 17569793 NA +3474 chr4 + 190214555 71862949 71862948 71863019 71 ATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATACATG chr4 - 94230402 8395796 8395795 8395866 85834537 85834536 85834607 71 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x...:.x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 63467153 NA +3189 chr4 + 190214555 71862960 71862959 71863018 59 TATATATATATATATATATATATATATATATATATACACACACACACACACACATACAT chr4 - 94230402 88147180 88147179 88147237 6083166 6083165 6083223 58 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATAT ..:..:..x:x..............:.x.:.:...:.:.............-....:.. 51M1D7M 46/58 79.3% 58/94230402 0.0% 1/58 1.7% -16284220 -77946182 +3061 chr4 + 190214555 71871920 71871919 71871979 60 AAATAAGTATATATATATATAT------ATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865451 4865450 4865516 89364887 89364886 89364952 66 AAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTT ..:...:x..............------...x.x.x.:.........x..x....x.......... 22M6I38M 50/60 83.3% 66/94230402 0.0% 6/60 10.0% 67006469 NA +3028 chr4 + 190214555 71871922 71871921 71871974 53 ATAAGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...xx.....:...:..:.:........x......:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% -20863429 -73366973 +3035 chr4 + 190214555 71871927 71871926 71871972 46 TATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735358 92735357 92735403 1495000 1494999 1495045 46 TATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...:...:..:.:...............:.x.........:.x... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -20863431 -73366971 +3185 chr4 + 190214555 71875350 71875349 71875434 85 CTTCTTTTGCGAAATGTCTATTCACGTCCTTTGCCTATTTTTAATGGGATTTTTTTCTTTTCTTTTTTTTTTTTCACTGTTAAGA chr4 - 94230402 31939911 31939910 31939995 62290408 62290407 62290492 85 CTTGTTCTGTGAAATGTGTTTTCCTGTGCCCTCCCATTTCCTGATGTGGTTTTTTTTGTTGTTTTTTTTTTGTTTGTTTTTTAGA ...x..:..:.......x.x...x:..x.::.x..xx..::.:...x.:.......:x..x:.........x..:::.x..x... 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 39935439 NA +6443 chr4 + 190214555 71876066 71876065 71876275 210 CTTCCTGTTTTCAATTTGAATACATTTTCTTTCCTTCCTGCCTTCCTTCGTTCCTTCCTTCCTTCTCTCCCTTCCTTCCTTCCTTTGTTCCTTCCTTCCTTCTCTCCCTTCCTTCCTTCCTTTACTTCCTTCCTCCCTCCCTTCTTTCCTTTCTTCTCTCCCTTCCTTCCTTCTTCCCTCCCTCCCTTCCTCCCTCCCTTCTTCCCTCCC chr4 - 94230402 92729502 92729501 92729701 1500702 1500701 1500901 200 cttcctttcccccttctttctccattttcttttttccc---cttcctctcctcccccccccttttttcctcttc--tatttccatt--ttctttcttttttttttccatt--ttccttcctttATTCCCCTCATATCACCCCCTATTTCTC-CTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ......x.:::.xx.:.xxx.x..........::.:..---......::x:...::..::.:..:.::.:....--.x:....x..--.:...:...::..:.:...x..--............:.:..:..x.x:.x...:::x..:..:-...:..::x:..::.....:......::.x:::.....:...x..:......:..:.. 38M3D33M2D10M2D22M2D39M1D58M 131/200 65.5% 200/94230402 0.0% 10/200 5.0% -20853436 -73376966 +3557 chr4 + 190214555 71876482 71876481 71876614 133 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTCCTTTCCTTCCTTC-------CTTCCTTCCTTCCTTCCTTCCTTCCCTCCT chr4 - 94230402 61964778 61964777 61964917 32265486 32265485 32265625 140 TTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT ..:..::x..x:..:.:.:.....:...:..::::.....:..:..:.........x::x:x.x.x.x...:::::.:..xxx..:..:..:.:x.x::.:..-------..:.::...x.x..:...x.x.:...:.:. 103M7I30M 77/133 57.9% 140/94230402 0.0% 7/133 5.3% 9911704 NA +3087 chr4 + 190214555 71876534 71876533 71876630 97 TTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTCCTTTCCTTCCTTCCTTCC--------------TTCCTTCC-----TTCCTTCCTTC-----CCTC-------CTTCCTTCCTTGCTTCCT chr4 - 94230402 61964778 61964777 61964905 32265498 32265497 32265625 128 TTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCT ..:..::x..x:..:.:.:.........:..::::.....:..:..:.........--------------:.......-----:...::..:..-----....-------..:.::...x....:... 56M14I8M5I11M5I4M7I18M 70/97 72.2% 128/94230402 0.0% 31/97 32.0% 9911756 NA +3294 chr4 + 190214555 71883294 71883293 71883368 75 TTGCATATACTTTTATGGGAATCTATTTTATTTTATTTTCTTTTTTCCTTTTTCTCTTTCTCTCTTTTTTTTTTT chr4 - 94230402 30157073 30157072 30157147 64073256 64073255 64073330 75 TTGCCTGTTCTTTTATGGAATTCTTCTTCTCATTCTATTTTTTTTTCCTGTTCCTCTTTCTAATATTTTTTTTCT ....x.:.x.........:.x...x:..:x:x..x.x..:.........x..:........xx:x........:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 41726221 NA +3024 chr4 + 190214555 71887018 71887017 71887097 80 ATATATACACACATATATACACACACTATATATATGTGTATATATATATACACACACATATATACACACACTATATATAT chr4 - 94230402 82696759 82696758 82696838 11533565 11533564 11533644 80 ACGTCTGCAAGTACATATATAGTAAAAATACGTATTTGGAGGCATATACACACACACATATATATTTACCCTGTATATAT .::.x.:..x::.:.....:.xxx.xx...::...x..x.x::.....:...............:x:..x..:....... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% -10809741 -83420661 +3029 chr4 + 190214555 71887041 71887040 71887116 76 CACTATATATATGTGTATATATATATACACACACATATATACACACACTATATATATGTGTATATATATATACACA chr4 - 94230402 12785629 12785628 12785704 81444699 81444698 81444774 76 CAGTGTATAGATTTGGTTATATATACTTACACACATACATGCTTATATTCTTTATATATGAATACATTTAATCACA ..x.:....x..x..xx........:x:.........:..:.x:.:.:.x.x.....:..x...:..x..xx.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 59101412 NA +3476 chr4 + 190214555 71887121 71887120 71887198 78 TATATACACACAC-TATATATATGTGTGTATATAGTGGTATATGTGACTATATATACACACACACTATATATATAATAT chr4 - 94230402 37363040 37363039 37363118 56867285 56867284 56867363 79 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATAT .:.:....:..x:-......:...::::x.....x....:...:..xx...:...x........x...:....x..... 13M1I65M 57/78 73.1% 79/94230402 0.0% 1/78 1.3% 34524081 NA +3168 chr4 + 190214555 71919499 71919498 71919571 73 TCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAAGAAAATAGAAAAAAAAATTTTAAGATTT chr4 - 94230402 19983831 19983830 19983903 74246500 74246499 74246572 73 TCCCTATCAAGAAACAAAAACAAAGCAACCAAACAAAAGAAATCAAACAATAAAAAGAACAATTTACAGATTT ...x.x....:...x.....x...:x..xx...x........xx.:.x....:...:..x.....xx...... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 51935668 NA +3158 chr4 + 190214555 71919503 71919502 71919568 66 TCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAAGAAAATAGAAAAAAAAATTTTAAGA chr4 - 94230402 61014057 61014056 61014122 33216281 33216280 33216346 66 TTTCAAAAGAAGAAAACAAAAAATAAAAGGGAAAGAGAAGACAAAATAGGGCAAAGACTTCCAAAA .:......:..:....x......x:...:::.....:..:.x.......::x...:.x..::..:. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 10905446 NA +3139 chr4 + 190214555 71930063 71930062 71930118 56 TACAAGAGTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAAAGTCT chr4 - 94230402 61429761 61429760 61429815 32800588 32800587 32800642 55 TAAGAGAGCTTTTTTCTTTCTTTTTTCTTTTTTTCTCCTTTGTTGAG-CAAAGCTT ..x:....:..:..............:.......:.::...x.....-.....::. 47M1D8M 44/55 80.0% 55/94230402 0.0% 1/55 1.8% 10500302 NA +3358 chr4 + 190214555 71930164 71930163 71930229 66 CTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGTCTCTCGAGTAGCTGGGACTAC chr4 - 94230402 18197126 18197125 18197191 76033212 76033211 76033277 66 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC ..:..:..:xx:x..:...........:.x...x.xx.x.....:..:..:.........:..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 53733038 NA +3018 chr4 + 190214555 71949876 71949875 71949933 58 AAAAATTAAAAAAAAAGCAGAGGTTGCAATCCTACTCTCTGATAAAACAGACTTTAAA chr4 - 94230402 20495337 20495336 20495394 73735009 73735008 73735066 58 AGAAATTTAAAAGAAAGCAGAAAGCACATTCTTACTCTCCAACAAAACAAATTCTAGA .:.....x....:........::x::..x..:.......::.:......:.:.:..:. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 51454539 NA +3087 chr4 + 190214555 72009252 72009251 72009314 63 ACAGATAATTGCTCTAAAATTTATATATACATATATATTTATGTATACATATATATATGTATA chr4 - 94230402 19637122 19637121 19637184 74593219 74593218 74593281 63 ATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATA .::.....x...x:xx.....x............x...:....:..::x...::.....:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 52372130 NA +3057 chr4 + 190214555 72009301 72009300 72009349 49 TATATATATGTATATTTTATATATATATATATATAACATTT----GAAACAGA chr4 - 94230402 70311063 70311062 70311115 23919288 23919287 23919340 53 TATATGTGTGTATACCTTATATATATATATATATAAGATTTCCaagaaaaaga .....:.:......::....................x....----....x... 41M4I8M 43/49 87.8% 53/94230402 0.0% 4/49 8.2% 1698238 NA +3064 chr4 + 190214555 72031712 72031711 72031793 82 TTCTCAGATTACTTACTGATTAATATCATCATCATCTCTATTTTACAAACGAGGAAACTGAGGCACAGAGAGGCTAAATCAC chr4 - 94230402 73089421 73089420 73089502 21140901 21140900 21140982 82 TTCTCAGACTGCCTTCAAAAAATGGGCATTAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAAC ........:.:.:.x.x:.xx.xx:x...:.x::..:..:....::.:.:x......x..........x....:x....x.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% -1057709 -93172693 +3379 chr4 + 190214555 72036543 72036542 72036644 102 TATAGTATATATAATGT---ATATATACATTTAAATATATAGTATATATAATGTATATA-TACATTTAAATATATAGTATATATATGAGATTCTGAGTCAAAATTA chr4 - 94230402 67910059 67910058 67910157 26320246 26320245 26320344 99 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATAT-AATATGTAGTATATACATG------TGAGATAAATTTA ...x::.....:...::---.x......xx...:...:...:..x.....x........-..:..x.-.....:.........:...------....x:...x... 17M3I39M1I7M1D19M6D13M 74/95 77.9% 99/94230402 0.0% 11/95 11.6% 4126484 NA +3000 chr4 + 190214555 72048680 72048679 72048743 64 AGTACTAATTTTTTTTTAATGATACTTTGGTAATGTGGTCAAAATGTGAAATAACTTATCTTTT chr4 - 94230402 22829627 22829626 22829690 71400713 71400712 71400776 64 AGTACTTTTTTTTTTTTAATGAAATTTTGGCAACAGTTTTAGAGCATGACACAAATTATCTTTT ......xx..............x.:.....:..::xxx.:.:.:::...x.:..x......... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 49219053 NA +3451 chr4 + 190214555 72080071 72080070 72080172 102 GTTTCACAACATAGAGATGTCTCTAAAGTTCTGGGACCAATTTCTTTTGAAATATAAATACCTGTTTTTTGTTGTTGTTGTTGTTGTTTTTTTGTTTTGTTT chr4 - 94230402 29791436 29791435 29791537 64438866 64438865 64438967 102 GTTTCAGAACATAGAAAACTTTAAGCAAGTTACAGATCCACACATTTTATAATCAAAACAACAGTTTTGTGTTTTTGTTGTTGTTGGTTTTTTTTTTTTTTT ......x........:.xx.:.xx:x.:x.:xx:..:.x.:x:x....:x...xx...:.x.x.....x....x............x......x....x... 102M 69/102 67.6% 102/94230402 0.0% 0/102 0.0% 42288635 NA +3225 chr4 + 190214555 72080122 72080121 72080181 60 ATATAAATACCTGTTTTTTGTTGTTGTTGTTGTTGTTTTTTTGTTTTGTTTTTCTTTTTT chr4 - 94230402 33197800 33197799 33197859 61032544 61032543 61032603 60 ATAGAAACATCTTCTGTTTGCTGTTTTTGTTGTTGTTTTTTTTTTTAATCTGTCTTTTCT ...x...:.:..x:.x....:....x................x...x:.:.x......:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 38882322 NA +3628 chr4 + 190214555 72127286 72127285 72127376 91 AGAGCTAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCATACAGATTCTAAATAATTTCTTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 4865283 4865282 4865366 89365037 89365036 89365120 84 AGGGTTCAAGTTCAGTTCAAAAAAAGGAAAAACAAAAAACAACAA-------CAGAATCCAAAAAGTATTCTTTTTTCTTTTTTTTTTTTT ..:.:.x:.x.:..x:.........::.....x......x..x..-------....x..:...x.:.x.::...:..:............. 45M7D39M 62/84 73.8% 84/94230402 0.0% 7/84 8.3% 67262003 NA +3208 chr4 + 190214555 72127312 72127311 72127375 64 AAAAAAAAAAAAAAAAAAAAGTCATACAGATTCTAAATAATTTCTTTTCTTTTTTTTTTTTTTT chr4 - 94230402 44523886 44523885 44523949 49706454 49706453 49706517 64 AAAAAAAAAAAGAAAAAAAAAGCAAGCAAGTTAAAATGCATTTTTTTTCCTTTTTTTTCTTGTT ...........:........:x..x:..::..xx..xxx....:.....:........:..x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 27603426 NA +3348 chr4 + 190214555 72149454 72149453 72149524 71 TCTAGTCTTTTGAGAAATAATTGTAGAGT---------TTTTTGCTTATTTGTTTGTTTTTGTTTTTTTGGGTTTTTTTT chr4 - 94230402 25965615 25965614 25965694 68264709 68264708 68264788 80 tttatttacttGAGAAACAGCTTTGGAGGCCCTGGATGTTTTTGCTGGGTTTTTTGCTTTTGTTTTTTTGGGTTTTTTTT .:..x.:x:........:.::.x.:...x---------........x:x..x....:....................... 29M9I42M 55/71 77.5% 80/94230402 0.0% 9/71 12.7% 46183839 NA +3334 chr4 + 190214555 72208136 72208135 72208189 54 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGGCTGTATGTTCTTTTGTG chr4 - 94230402 18982315 18982314 18982367 75248036 75248035 75248088 53 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT-TTATTTTGTG ..................x.x................xx.x..-..x....... 43M1D10M 47/53 88.7% 53/94230402 0.0% 1/53 1.9% 53225821 NA +3222 chr4 + 190214555 72218300 72218299 72218339 40 TGTGTATGTGTGTGTGTGAGAGAGAGAGATAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....:.......................x......::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 53235985 NA +3187 chr4 + 190214555 72218302 72218301 72218348 47 TGTATGTGTGTGTGTGAGAGAGAGAGATAGAGAGAGAGAGATCTTAT chr4 - 94230402 18982315 18982314 18982361 75248042 75248041 75248088 47 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ...:............x..........x........::..:x:.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 53235987 NA +3107 chr4 + 190214555 72243214 72243213 72243355 142 CAAATTATTATAAAAAGTGAAG------TATTGCATGTATACTTTAATGTTTCATATTATATGAATATAATCTCTGTGATTAAATATGTTGTTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATACAT chr4 - 94230402 70982563 70982562 70982681 23247722 23247721 23247840 119 CAGATTACTACTACAATTGGAGGTAGGCTATTTCATATATATATT--------------TATTCATGTAACTT---------------TTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..:....:..:x.x..x..:..------....x...:....:x..--------------...xx..:...::.---------------..x.:x............:.......:::.:...x::.:x:........::..:.:.... 22M6I17M14D14M15D60M 79/113 69.9% 119/94230402 0.0% 35/113 31.0% 1260651 NA +3176 chr4 + 190214555 72254586 72254585 72254668 83 CTGCAACCTCCACCTCCCAGTTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx.x..:.::.x......x.x...x.xx.x........::::...........:....x...--.:....::.. 71M2D10M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 54057460 NA +3435 chr4 + 190214555 72305707 72305706 72305838 132 ATTTTGATTCTTACATATACGTATGCACATGTATGTACATATACATATGCA-CATGTACACACATATACACATGCACATGTACGCACATATACGCATGCACATCATGCACATGTACGCACATATACGTATGCA chr4 - 94230402 61485320 61485319 61485452 32744951 32744950 32745083 133 ATCTAGATTTTTCCACGAATTTTTGAACTCTTATCCTTGGTTGCATCTACAGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACA ..:.x....:..x..::x.:x.x..x..x:x...x:x::xx.:...x.:..-x..:....:.....:...........:x.::.:::..:..:.:..x:.:..:x..:.x.....::x.:.x...x..:.:.. 51M1I81M 79/132 59.8% 133/94230402 0.0% 1/132 0.8% 10820387 NA +3234 chr4 + 190214555 72305735 72305734 72305811 77 ATGTATGTACATATACATATGCACATGTACACACATATACACATGCACATGTACGCACATATACGCATGCACATCAT chr4 - 94230402 4481682 4481681 4481756 89748647 89748646 89748721 75 ATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATG--TACACATTAT ....:.x.x......x:.:..:::....:....x.:........x.....::x.xx.......:.--.:.....:.. 65M2D10M 54/75 72.0% 75/94230402 0.0% 2/75 2.7% 67824053 NA +3290 chr4 + 190214555 72333777 72333776 72333864 88 TTTAATAATCAATTCCTGAAAGAAGGTTTTCTTTTTTGTTGTTTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTT chr4 - 94230402 33926079 33926078 33926166 60304237 60304236 60304324 88 TTTAAAGATAATTTGATGAGGAAATGTATTATTTAAGATTACTGTTATGTTGTTGTTTTTTTAGTTGGTTGTTTTTTTTTCTTTTTTT .....x:..x.x..xx...:::..x..x..x...xxx:..::.x.xx...........x...:x...x...:........:....... 88M 61/88 69.3% 88/94230402 0.0% 0/88 0.0% 38407698 NA +3723 chr4 + 190214555 72333780 72333779 72333867 88 AATAATCAATTCCTGAAAGAAGGTTTTCTTTTTTGTTGTTTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 45023699 45023698 45023778 49206625 49206624 49206704 80 AATAATAACTTCCTT--------TTATTTACCCTGTTCTTTTGTTGTCGTTGTTTGGTTGTTTGCTTTTGTGTGTTTTTTTTTTTTTT ......x.x.....x--------..x.:.x:::....x.........:........x..........x:x.x.x.............. 15M8D65M 63/80 78.8% 80/94230402 0.0% 8/80 10.0% 27310081 NA +3135 chr4 + 190214555 72333809 72333808 72333865 57 TTTTTGTTGT-TTTGTTGTTGTTGTTTGTTTGTTTGCTTGCTTTTTTTTTTTTTTTTT chr4 - 94230402 34237840 34237839 34237897 59992506 59992505 59992563 58 tttctgctacaTTTGTTCTTGTTGGTTTTTTGTTTGTTTGCTTTTCTTTTTTCATTTT ...:..:.::-......x......x..x........:........:......:x.... 10M1I47M 46/57 80.7% 58/94230402 0.0% 1/57 1.8% 38095969 NA +3810 chr4 + 190214555 72390370 72390369 72390483 114 ATTAATTCTCAAAAGAACCCAGTGAGGAAGACACTTGTCTTT--CCCCATTTTACATGTGTGAAAACTGAGGCACAGAAAGTTAAAATAAATTGTCTTAGATGGAGCCTGAATTCA chr4 - 94230402 10729160 10729159 10729270 83501133 83501132 83501243 111 ATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCC-----CAGAGTCTGGGTACA ...x.x:....x..x.x...x......x..::.x..:::x.:--.:..........x...x...............x.x..x.x..:...x...:.-----::...:...::.x.. 42M2I52M5D15M 77/109 70.6% 111/94230402 0.0% 7/109 6.4% 61661210 NA +3031 chr4 + 190214555 72392897 72392896 72392946 50 AATTCTTCTACCCATCGGATTTTTTTTTTTTTTCTTTTTTTTTTTCTGAG chr4 - 94230402 5803535 5803534 5803584 88426819 88426818 88426868 50 AATCCTTTCACATCTCGGATTTATTTTTTTTTTCTTTTCCCCTTTCTGAG ...:...::..x:x........x...............::::........ 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 66589362 NA +3164 chr4 + 190214555 72404774 72404773 72404858 85 AAAAATCTAAAGAACTCCTTCAACTCAGTAGCAAAACAAACAAGCAAACAAAACACACACACACACACACACACACACACACACA chr4 - 94230402 31707613 31707612 31707697 62522706 62522705 62522790 85 AAGACTTTTGAGAAGTCTTTCAAATCCCTTAAAAAATAAACAAAACAACAAAAAAAAAAAACCAACACATACACAAACACCCACA ..:.x.:.x:....x..:.....x..xx.x:x....:......:xx.......x.x.x.x..xx.....:.....x....x.... 85M 59/85 69.4% 85/94230402 0.0% 0/85 0.0% 40697161 NA +3224 chr4 + 190214555 72416153 72416152 72416219 67 TATGTTTTCAGCAAATATAAATATAAATATATATATT--CATATATGTATATAAATAAATAAATATATA chr4 - 94230402 30104184 30104183 30104252 64126151 64126150 64126219 69 TGTATTTTCACCTATCATGAAGATATACAGATATACTTCCATATATGTATATAAGTAAATGAAGATATA .:.:......x.x.x:..:..x...x.:.x.....:.--...............:.....:..x..... 37M2I30M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 42311969 NA +3755 chr4 + 190214555 72456287 72456286 72456367 81 TAGTATATATACTGTATATACTATATA-TATTTTATATATAGTATATATACTGTATATACTATATATAGTATATAGTATACA chr4 - 94230402 67910059 67910058 67910140 26320263 26320262 26320344 82 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATA ..x..:......x:..:xx.xx.....-....xx...:...:..x.....:........x........:...:.......:. 27M1I54M 62/81 76.5% 82/94230402 0.0% 1/81 1.2% 4546228 NA +3499 chr4 + 190214555 72456334 72456333 72456432 99 TACTGTATATACTATATATAGTATATAGTATACAATATATAGTATATATAGTATATATATTATAGATTTTATATATAGTATATATATAACATATATATA chr4 - 94230402 67910059 67910058 67910157 26320246 26320245 26320344 99 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTA ..:.::......x...:xx.:x.....x...xx:...:...:..x.....x.:......x....x..xx...:..xx:....:..:.:.x...x..x.. 99M 67/99 67.7% 99/94230402 0.0% 0/99 0.0% 4546275 NA +3166 chr4 + 190214555 72463645 72463644 72463714 70 ATTTTTTTACTATTTTTCAGTGTTTTGAAATCTTTTTTGGATACTAAAACAGGCAAAAAAAAAAAAAAAA chr4 - 94230402 17257572 17257571 17257641 76972762 76972761 76972831 70 ATTTATTTGTAGTATTGCAGTGTTACGACATTTTTTTTTGGCCAAAAAGAAGGCAAAAAAAAAAAAAAAA ....x...::x:.x..x.......x:..x..:......x.::xxx...:x.................... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 55206073 NA +4701 chr4 + 190214555 72526655 72526654 72526803 149 CTTTTATATAACCATATACACATGCATATCTTTGTATACACT--------------ACACACATATATAGAGACAGAAAAA--------ATATATACATACATATATAT-------------------------ATATATA-TATATATATA-TATATATATATATATATATAGACAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 89611845 89611844 89612040 4618363 4618362 4618558 196 CTTTtatata--catacatatatatatatgtatatatgtattgtatatgtaatctaacacatatatatatatataATAGAATACGAAGCATAGATAAATCCTTATCTATCTCCGTATTATTAGTACAACATATAATATATAATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAG ..........--....:.:.:..::....x.x.:...::.:.--------------.....:.......x.x.:.:x.:..--------...x...x..x.x...x...-------------------------.......-.....x....-......x.x......::....:...............::...... 10M2D30M14I25M8I20M25I7M1I10M1I45M 116/147 78.9% 196/94230402 0.0% 51/147 34.7% -17085190 -77145212 +3713 chr4 + 190214555 72526696 72526695 72526807 112 TACACACATATATAGAGACAGAAAAAATATATACATACATATATATATATATATATATATATATATATATATATATATATATAGACAGAGAGAGAGAGAGAGAGAGAGGAAT chr4 - 94230402 33398783 33398782 33398880 60831523 60831522 60831620 98 TACACACATGCGCACAGAC--------------CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .........::::.x....--------------....:.x..:...x..x.x:.:.:::.:.:.:....:.:.......:.:...x.........x.....x...x.x.x.. 19M14D79M 69/98 70.4% 98/94230402 0.0% 14/98 14.3% 39127913 NA +4066 chr4 + 190214555 72526718 72526717 72526811 94 AAAAATATATACATA-----------CATATATATATATATATATATATATATATATATATATATATATATAGACAGAGAGAGAGAGAGAGAGAGAGGAATCCAT chr4 - 94230402 33398776 33398775 33398880 60831523 60831522 60831627 105 AGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .:.......:...:.-----------......x..:...x..x.x:.:.:::.:.:.:....:.:.......x...............x.....x..:x..x:.. 15M11I79M 69/94 73.4% 105/94230402 0.0% 11/94 11.7% 39127942 NA +4350 chr4 + 190214555 72530718 72530717 72530875 158 AATATTA--TACATTATATATTATATATATTATA-TATTATATATTATATAGATTATATATATTATAT----TATACATTATATATTATATATATTATATATTATATATTATATAGATTATATATAATATATAATATA------TAATATTTTATATGATATATATTATAT chr4 - 94230402 20596459 20596458 20596623 73633780 73633779 73633944 165 AATGTTAATTACCATGTATATCATA-ACATTATAACGTGaaataatattta-ataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGT----TGTCTTATAT ...:...--...xx.:.....:...-.:......-::.x.x...x...x..-..x..x.:.......x----x....x.....x.x:.......x........:....x...:.....xx.......x:..:...x..------........x..:.----.:.x...... 7M2I16M1D8M1I16M1D16M4I66M6I13M4D10M 117/152 77.0% 165/94230402 0.0% 19/152 12.5% 51934259 NA +3868 chr4 + 190214555 72530734 72530733 72530873 140 TATTATATATAT---TATATATTATATATTATATAGATTATATATATTATATTATACATTATATATTATATATATTATATATTATATATTATATAGATTATATATAATATATAATATATAATATTTTATATGATATATATTAT chr4 - 94230402 48211465 48211464 48211596 46018807 46018806 46018938 132 TATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCAC-----------AGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ...:....x...---..::xx.x.......x...:x.:.:.....xx.x.x.....:.......:::....x...:......:.:-----------.x:.....:x.....::..x...:.xx:x..:x.......::.x... 12M3I70M11D47M 88/129 68.2% 132/94230402 0.0% 14/129 10.9% 24319269 NA +3353 chr4 + 190214555 72530757 72530756 72530868 112 TATTATATAGATTATATATATTATATTATACATTATATATTATATATATTATATATTATATATTATATAGATTATATATAATATATAATATATAATATTTTATATGATATAT chr4 - 94230402 48211465 48211464 48211572 46018831 46018830 46018938 108 TATCATAT---CTATACATACGAC-TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTAT ...:....---:....:...:x.:-.x...:...x...:.xx.:........x.x.............:xxx...x...x......x.:.xxxx...::x....:...x... 8M3D13M1D87M 76/108 70.4% 108/94230402 0.0% 4/108 3.7% 24319292 NA +3266 chr4 + 190214555 72533583 72533582 72533689 107 ACATTTATATGTATACACATATGCACATATGTATATATACATATATATGTATATGCACATATGTATATATACATATATATGTATATGCACATATATGCACACATGTA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ....x....:::.:.....:.x.x.....:.:..:x:x::x.::.:......xx:x:...x.:x.....:......x...x.......-..:.x.::.xx....:.. 88M1D18M 68/106 64.2% 106/94230402 0.0% 1/106 0.9% 68116234 NA +3269 chr4 + 190214555 72533604 72533603 72533668 65 TGCACATATGTATATATACATATATATGTATATGCACATATGTATATATACATATATATGTATAT chr4 - 94230402 2899028 2899027 2899092 91331311 91331310 91331375 65 tgtatgCATGTATATATTCAAATGCATGATTTTGTGTATATGTATGTAATCATATATATGTATAT ..:.:::..........x..x..::...xx.x..:::........:..xx............... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 69634576 NA +3155 chr4 + 190214555 72539488 72539487 72539604 117 TCAGAAAAAAAAAAAAAAAAAAAAAACAGAAAATAACAAGTGTTCACAAGAATGTGGAAAAAAATCA------------AACTCTGTGCACTGTTGATGGGAATGTAAAATGGTATAGCTACTTATATG chr4 - 94230402 37918492 37918491 37918620 56311783 56311782 56311911 129 TCAGAAAAAAAAAAAAAAAAGAACAGAAGAAATCAGCATATGTCCAAAGGGACTTCAAAATAGATCAGCAAGGAAAAACAAATCTGTGCTGAGGAAAGGGCAAAGGCAAACAAGAAAGCAGCATATGTG ....................:..x.:x.....x:.:..x:...:..x.:.:.:x.x:...x.:....------------..x.......xxx.xx:.x..x..x.xx...:::x.x...x:.x...:.. 67M12I50M 77/117 65.8% 129/94230402 0.0% 12/117 10.3% 34620996 NA +3152 chr4 + 190214555 72576072 72576071 72576118 47 AATCTAGCTTGTTAGGAAGAAAAAACAAAACAAAACAAAAAACTGAA chr4 - 94230402 39864951 39864950 39864997 54365406 54365405 54365452 47 AATCTAGCTTCCACATAAGAAAAAACAAAACAAAACAAAAAACTGGA ..........x:xx:x.............................:. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 32711121 NA +3015 chr4 + 190214555 72604826 72604825 72604895 70 TTTATTTCTGTAAGTTTCTTTTCTTCTTTCTTTTTTTTTTTTTTAAAGAAACGGGGTCTCACTCTGTTGC chr4 - 94230402 42133355 42133354 42133424 52096979 52096978 52097048 70 TCTACTTCTGTCAGTTTTTCTTCTTTTTTCCTTCTGTTTTTTTTAGTGGAATCTGTTGACAGTGTGCTGC .:..:......x.....:.:.....:....:..:.x.........:x.:..:xx.x.xx..x.x..:... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 30471471 NA +3104 chr4 + 190214555 72615366 72615365 72615429 64 TGAAAATACACAATCAGAGAAAATAAAAGAAAAAAGACTAAAAATGAATAAAGCACAAGTACAA chr4 - 94230402 12885751 12885750 12885814 81344589 81344588 81344652 64 TGAAAACAAACAATCAGAAAAAAAAAAAAAAAAGTGACTATGAAAAAAAAGAACACAAAATCAA ......:.x.........:....x....:....:x.....x:..x:..x.:.:.....:xx... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 59729615 NA +4485 chr4 + 190214555 72629486 72629485 72629583 98 GCTTCAGGGAAAGCCTAGGCCCTGGATTTTGTTGTTGTTGTTGTTCATTTGT--TTGTTTGTTTTGTTTGTTTTTGTTTTTTAAGGCTCACCTCATTGGA chr4 - 94230402 2688628 2688627 2688727 91541676 91541675 91541775 100 GCTTTAAGAGAAGCCCAGACTACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTTAAATGTTTTTTCTTCCTACCACTCATTTCAAAGGA ....:.:.::.....:..:.:x:x.....................::.....--..x........:xx.......x:..::..xx:....::...xx... 52M2I46M 71/98 72.4% 100/94230402 0.0% 2/98 2.0% 69940858 NA +3113 chr4 + 190214555 72629508 72629507 72629543 36 TGGATTTTGTTGTTGTTGTTGTTCATTTGTTTGTTT chr4 - 94230402 64800064 64800063 64800099 29430304 29430303 29430339 36 TGGATTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT .......................::........... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 7829444 NA +3898 chr4 + 190214555 72795858 72795857 72795937 80 CTGTGAGACAAATAGCT----TTCTCTCTGTTTTACAGATGAGGAAACTGAGGCCCAAACAGATTAAATGATTTGCACATAGTC chr4 - 94230402 10729179 10729178 10729262 83501141 83501140 83501224 84 CTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .......::.::..::.----.:xx...::........:..:.:..........x..x....:....:.:......x..x.... 17M4I63M 59/80 73.8% 84/94230402 0.0% 4/80 5.0% 62066679 NA +3288 chr4 + 190214555 72842009 72842008 72842084 76 AAATTTAAGGTTCCTAGAATAGCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAACCTT----GAATTTATTTGAAGGGCA chr4 - 94230402 90576667 90576666 90576746 3653657 3653656 3653736 80 AACTGTGAGGACCTTCAAATAGCTGGGAAAAAAAAAAAAAAACAAGAACGAAAGCCTTTCGAGACTTTTTTTAAACGATA ..x.x.:...x:.:.x:..........:..............x..:..x:...:....----..x...x...:..x.::. 58M4I18M 56/76 73.7% 80/94230402 0.0% 4/76 5.3% -17734658 -76495744 +3298 chr4 + 190214555 72950076 72950075 72950165 90 TTGTGTGTGTGTGTATATATATGTATCACATTTTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982593 70982592 70982681 23247722 23247721 23247810 89 TTTCATATATATATTTATTCATGTAACTT-TTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..x::.:.:.:.:.x...x:.....x.x:-....x:x...........:........:....:.x:...x..:.:.:.::...:.:.:.. 29M1D60M 59/89 66.3% 89/94230402 0.0% 1/89 1.1% 1967483 NA +3127 chr4 + 190214555 72950110 72950109 72950150 41 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.......................:..:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% -16871171 -77359231 +3016 chr4 + 190214555 72955695 72955694 72955765 71 CAAAAAAAAAAAAAAAAAAAAAAGAATAAAGAAAAAAAAGAAAAAGAAAGAAAAGAAAGAAAGAAAGCGAG chr4 - 94230402 24662129 24662128 24662199 69568204 69568203 69568274 71 CAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAG ...................:.xx...xx:..:....:.::x.:.:..:...x..:::..:..:x..x:... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 48293566 NA +3313 chr4 + 190214555 72957827 72957826 72957911 85 TTTCTTTATCTATTTCTCTTATATCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGA chr4 - 94230402 84182645 84182644 84182723 10047680 10047679 10047758 79 TTTCTGCATTTACAGTTCCCATATATTTTTTACCTTTTCTTCTTTTTTTTTTTTTT------AAGTTTCAGTCACATTGTCAAGA .....x:..:..:xx:..::....x...:..x.:....:.................------:......:x..x::...:.x... 56M6D23M 57/79 72.2% 79/94230402 0.0% 6/79 7.6% -11224818 -83005584 +7484 chr4 + 190214555 73026726 73026725 73026876 151 GCTCTTTTAAAATTACTAGCTAGT-----GTTGTACAAAAGGAGAGAAGGTTAGCACTCCCCTTGACAAGGATGGAAGAGGCCCT----TGGGCCTGACAACATGCATATGGTTAAGGCATTGCCACCTACTTCGTGGCATCCAACCATCGTTTTTATGG chr4 - 94230402 48615051 48615050 48615208 45615195 45615194 45615352 158 GTTCTTATGAAATTA-TAGCCAATTTCTTATTGTATGAAACGTGAGAAGGTGAGTGTTCCCCTTGATAAGGATGGAACAGGCCCTAGCCTGGACCGTACAATATGCATGCGGTGAAGGCACTGCCAACTACGTCATGGCATCTAACCAT-GTTTTtgggg .:....x.:......-....:.:.-----:.....::...x.x........x..:::.........:..........x.......----...:..xx....:......::...x......:.....x....x..:.......:......-......:x.. 15M1D8M5I56M4I60M1D10M 119/149 79.9% 158/94230402 0.0% 11/149 7.4% 24411675 NA +3191 chr4 + 190214555 73086860 73086859 73086957 98 TGCACTCCAGCCTGGGCGTCCGAGTGAGAC---TCCATCTCAAAAA---------------AAAAAAAAAAAAAAAAAATATATATATATATATATATA---TATATATATATATCTGT chr4 - 94230402 69437681 69437680 69437796 24792607 24792606 24792722 116 TGCATTCCAG---GGGATTGAGATTGAGATGGATCAACTCCAAAAATCCAATGCAATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGT ....:.....---...xx.xx..x.....:---..x.:::......---------------.........x........:x..................---..:...x:..xx..... 10M3D17M3I13M15I38M3I17M 76/95 80.0% 116/94230402 0.0% 24/95 25.3% 3649179 NA +3618 chr4 + 190214555 73115366 73115365 73115438 73 CTGCAACCTCCACCTTCCGGGTTCAAGCGATTTTCGTGCCTCAGCCTTCCAAGTAGCTGGGATTATAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x....:.........:.x..:x.:x.x.........:...........:.:..:.x.::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 54918240 NA +3612 chr4 + 190214555 73132197 73132196 73132254 58 CTTCTGGGTTCAAGTGCTTCTCCTGCCTCAGCCTCCCAAATAGGTGGGATTACAGGTG chr4 - 94230402 18197139 18197138 18197196 76033207 76033206 76033264 58 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ....................x.xx.x........::...:...x...:.:....x... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 54935058 NA +3734 chr4 + 190214555 73158087 73158086 73158194 108 TCTTGAAGGAAAGAAAGGAAGGAA--AGAAGGAGAGAAAGAAAGAAGGAGAAAGAAAGAAAGGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAG chr4 - 94230402 55334386 55334385 55334494 38895909 38895908 38896017 109 TCTTAGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAA-AGAGAG ....::.:..x:..x.:.:..x..--.....::...::....:x..x:x:x...:...:........x.x......:..:...:...x:::.x.x..::....-...... 24M2I77M1D6M 72/107 67.3% 109/94230402 0.0% 3/107 2.8% 17823701 NA +3464 chr4 + 190214555 73158112 73158111 73158211 100 GAAGGAGAGAAAGAAAGAAGGAGAAAGAAAGAAAGGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAAG chr4 - 94230402 61334701 61334700 61334800 32895603 32895602 32895702 100 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAG ...:........x......x.:x.:......:x::.:...x:xx..x....xx.:x::..:.x.x.:....x..x..::.:.:.x..:........::.. 100M 64/100 64.0% 100/94230402 0.0% 0/100 0.0% 11823411 NA +3188 chr4 + 190214555 73158143 73158142 73158200 58 AAAGGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ...:.x...........:...:.......:..xx:..:x....:..:...:...::.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 65446794 NA +3110 chr4 + 190214555 73179370 73179369 73179490 121 AAAAACAATTTTTTAAAATTATATATATTTTAAATTATATATATATGTGTGTGCATATATGTGTGTGTGTATATATATCTGTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 81401286 81401285 81401400 12829003 12829002 12829117 115 AAAAAAGATATTTT-----TGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAGTGCCTTTTTGT-TATGTA .....x:..x....-----.:.:.x.:.x..x..xx.......:..:x.x..:...:..x.............x..:..::.:.:x..:.::.x.x.x.x:x...:x.x.x...-.:.... 14M5D95M1D6M 76/115 66.1% 115/94230402 0.0% 6/115 5.2% -8221916 -86008486 +3348 chr4 + 190214555 73179377 73179376 73179481 105 ATTTTTTAAAATTATATATATTTTA-AATTATATATATATGTGTGTGCATATATGTGTGTGTGTATATATATCTGTGTATATATGTATATATGTGTGTGTGTGTGT chr4 - 94230402 51537714 51537713 51537819 42692584 42692583 42692689 106 ATTCTGTAGAGTTGCACAAATAACATAATTAAACATATAGATGTATGTATTTCTGTGTCCGTTTATATATATTTCAGTATAAATTTATTTCTGTAGATGGGTATAT ...:.x..:.:..::.:.x..xx:.-.....x.:.....x:...:..:..x.x.....x:..x.........:.xx.....x..x...x.x...:x:..x..:.:. 25M1I80M 70/105 66.7% 106/94230402 0.0% 1/105 1.0% 21641663 NA +3180 chr4 + 190214555 73179438 73179437 73179500 63 GTATATATATCTGTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406409 4406408 4406471 89823932 89823931 89823994 63 GCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA .:.....xx..x.x:..::...:....xx.:.:x....................x:....... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 68773029 NA +3137 chr4 + 190214555 73179443 73179442 73179527 85 TATATCTGT----GTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTT chr4 - 94230402 57691380 57691379 57691468 36538935 36538934 36539023 89 TATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ....:...:----...x:.:::..:..::x.......:..:x..........:..x....:x...x.....x.xx..x.::x....... 9M4I76M 59/85 69.4% 89/94230402 0.0% 4/85 4.7% 15488063 NA +3108 chr4 + 190214555 73179447 73179446 73179499 53 TCTGTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089495 48089494 48089547 46140856 46140855 46140908 53 TCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .....:x:.x.:.:....:.:........:....x.x......:......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 25089952 NA +3097 chr4 + 190214555 73179448 73179447 73179515 68 CTGTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959561 32959560 32959628 61270775 61270774 61270842 68 CTGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ...::xx.:.:.::x....::..x....x.....::...:.......:.......:.x......x:.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 40219887 NA +3025 chr4 + 190214555 73179450 73179449 73179525 76 GTGTATATATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTT chr4 - 94230402 57691393 57691392 57691468 36538935 36538934 36539010 76 GTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ..:x:.::..::..::x.......:..:x.........::..x....:x...x.....x.xx..x.::........ 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 15488057 NA +3687 chr4 + 190214555 73179458 73179457 73179561 104 ATGTATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTAAAGAGACATGGATAGTCTCACTGTG chr4 - 94230402 8681913 8681912 8682009 85548394 85548393 85548490 97 ATGGATATCCATGTCTG-------ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTGATTGTCCAGATGTG ...x....x::...x..-------:.:.:x:.........:...::.:.:.:...:.....x:.:.............:.....x:x.x...x...:x:x.... 17M7D80M 67/97 69.1% 97/94230402 0.0% 7/97 7.2% 64497545 NA +3005 chr4 + 190214555 73179466 73179465 73179506 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% -16641815 -77588587 +3104 chr4 + 190214555 73179468 73179467 73179526 59 GTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTT chr4 - 94230402 50558510 50558509 50558568 43671835 43671834 43671893 59 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTT ...::.....x..........:..:.:....:..:....x.:.x.x.x.x:........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 22620958 NA +3036 chr4 + 190214555 73179469 73179468 73179508 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -16641813 -77588589 +3005 chr4 + 190214555 73179480 73179479 73179529 50 GTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 34066892 34066891 34066941 60163462 60163461 60163511 50 GTGTGTGTCTCCACATTTATATATACACATATATATATATTTATTTTCCT ........x.x:.:..x........:.:..............x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 39112588 NA +3196 chr4 + 190214555 73179494 73179493 73179541 48 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTAAAGAG chr4 - 94230402 5683041 5683040 5683088 88547315 88547314 88547362 48 ATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGAGGAG .....:.:.:.:...:........:x................:.:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 67496453 NA +3034 chr4 + 190214555 73199193 73199192 73199248 56 TAACAGGCTGCGAAAACATACAGTTTGGCTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 18660874 18660873 18660929 75569474 75569473 75569529 56 TAATAGTCTGTGCAGACAGACCAATTGGCTGTGTGAGTGTGTGTGTATATATGTAT ...:..x...:.x.:...x..x:x...........x..........:.:.:...:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 54538319 NA +3107 chr4 + 190214555 73199231 73199230 73199292 62 GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGAGGAGGGAAGGGGAAAACAAGGAAAGTAAA chr4 - 94230402 51474480 51474479 51474541 42755862 42755861 42755923 62 gCGTGTGTGCGTGTGCGTGTGCGTGCAGGGGGAGGGTGGGGGGGAAAAATCAAATAAATAAA .:.......:.....:.....:...::xx......:x..::...:....:x.::x..:.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 21724751 NA +3036 chr4 + 190214555 73206422 73206421 73206481 60 AAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAGAGAAAGGGAGGCAGGCAGGGA chr4 - 94230402 17078261 17078260 17078320 77152083 77152082 77152142 60 AAATGGGGGGGAGGGGGAGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAGA ..:..:.:.:...:.:.................x..xxx..::...:::.x:.....:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 56128161 NA +3071 chr4 + 190214555 73214845 73214844 73214918 74 ATTAAAAAAAAAAAAAAAAAAAAAGCAAGAAAGAAAAGAAAAAGAAATTTTTTCAGTCTTGAATATATTACTTT chr4 - 94230402 14228946 14228945 14229019 80001384 80001383 80001457 74 ATTAAGGAAAAAAAAAAAAAAAAGGTAAAAAAGAGTTAAAAACATAATGTATTTCATTGCAAATATTTTTCTTT .....::................:.:..:.....:xx:....x:x...x.x..:x:.:x::.....x..x.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 58985899 NA +3007 chr4 + 190214555 73226365 73226364 73226414 50 AATAGTAATAATTTCTTTTCTTCTGTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 72340311 72340310 72340360 21890043 21890042 21890092 50 AATAACAATAAAATCCTTTCTTCTGCTATTTTTTTTTTTTTTATCTCTGA ....::.....xx..:.........:.x..............x.:.:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 886054 NA +3418 chr4 + 190214555 73258622 73258621 73258861 240 CCTTCTGCAGCCGTCGCCGCCGCCA---CCGGAACCGTCGCCTTCTCCATCCCCAGGGAAAGAGGGAGGGCGCGGACGGGGGAGGGGCGTGGGGCTACGCTCTACCGCGACTTCG-GCCGCACTGGGGCCGACA----CAGCAATCGGTGCCGCCT-------CCGCCGCCA------------CCGCCTCGGTCACCT----CTACTGCCGCCGCCGCCGCCGCCGCTCCGCCAGCTCTCACCTCGTCTCGCGATACTAAGGGCGGGGAG chr4 - 94230402 57798501 57798500 57798758 36431645 36431644 36431902 258 CCGTCTGCCACTACCTGCGCCGGCAGAGCAGGAGCCCGGGACTgccccgctcc--------gccggcggccgcgg--gggggagcgctgcccggcccggct-tcccgcctccccgcgccggacgccggcccACAGCCGCAGC--TCCGAGCGGCCCGGAGGTGCCGCCGCCTGCCTGGCTCGGTTCGGCTCGGGCGCCCGAGGCTGCTCCCGCCGCCGGTGCCTCCTCTCCGCCCGCTCCGGCTGCGTCTCCCTACCCTCGCAGCGGGGAG ..x.....x:.:::.xx.....x..---.x...:..xxx.x..x.:..:::..--------.xx..x..x.....--.......x.x:.:xx...:xx...-.x....xx.::..-....x..xxx....x...----....--..x.x..x...:-------........x------------:..x.....x.:..:----..:..x.........x:...x..x.......x....:x:.:x......x.x.:x..x:x:........ 25M3I25M8D14M2D24M1D13M1I18M4I4M2D12M7I9M12I15M4I68M 154/227 67.8% 258/94230402 0.0% 44/227 19.4% 15460121 NA +3116 chr4 + 190214555 73300986 73300985 73301031 46 TCTCTCTCTCTCTCTTTTTTTTTTTTTTCTATAATCCTATCTCTTT chr4 - 94230402 18929916 18929915 18929961 75300442 75300441 75300487 46 TCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCT ............................:.x.::...:..:.x.:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 54371070 NA +3229 chr4 + 190214555 73314908 73314907 73314987 80 CAAAACAAGACACTGTCTCAAAAAAAAGAAAAAAAAAGAAAAAAGAAAAAAAAAAGAAAGAAAAAGTAGAAAACAAATGA chr4 - 94230402 83671941 83671940 83672020 10558383 10558382 10558462 80 CAAAACGCTGCTTTGTGTCAAGACAAGAAAAAAATAAGGAAAAGGAAAAAAAAACAATGGAAAGCATGAAATGCAAAAGA ......:xx:.x:...x....:.x..::......x...:....:..........x:.x:....:x:.::..x:....x.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -10357033 -83873369 +3160 chr4 + 190214555 73318639 73318638 73318795 157 TCTCCCTCATTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTATTTCTTTCT chr4 - 94230402 34857698 34857697 34857850 59372553 59372552 59372705 153 TTCCTTTTATTACTTACCCT-TTTATTACTATTTTCC---CTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCT .::.::.:...x...x.:..-...x..x..x.:..:.---....:x..x...:......:.:::..:x.:::.:.:x.:x:.x.:x:.x.:.:..:..:.x.:x...x..x:..::xx:x..:..:...:..x.:x...:.::..x:...x...... 20M1D16M3D117M 88/153 57.5% 153/94230402 0.0% 4/153 2.6% 38460941 NA +3537 chr4 + 190214555 73318651 73318650 73318750 100 CTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..:...:..:.:::...:.....:..x::..::x.x.:::x:..:xx....xxx:....x.:...:.......:.......x.xx..::........ 100M 63/100 63.0% 100/94230402 0.0% 0/100 0.0% 30236726 NA +3248 chr4 + 190214555 73331189 73331188 73331249 61 AGGCTCCCCTTTTCATTCCTAATACTGCTTTTTTTTTTTCTTTTTCTTTTTTGAGACAGAG chr4 - 94230402 17623038 17623037 17623098 76607305 76607304 76607365 61 AGACTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAG ..:..:..:..:...x:...xx.x.:x..............x...:x........:..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 55708151 NA +3360 chr4 + 190214555 73343063 73343062 73343153 91 TCTTTTCTTTTCGTTTCTTTTCTTTTCTTTTTTGTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAGAAGTCTCA-CTCTGTCA chr4 - 94230402 40100168 40100167 40100259 54130144 54130143 54130235 92 TTCTTTCTCTTCATGTGTTTAAGTTATTTCTGTATCTTCTCCACCCATTTTTTTTTTCTTTTCTTTTTCTAGACTAAATCTCAGTTCTGTCA .::.....:...:.x.x...xxx..x:..:.x.:.:....::x.::x..........:....:.....:x...xx..:.....-:....... 83M1I8M 62/91 68.1% 92/94230402 0.0% 1/91 1.1% 33242895 NA +3931 chr4 + 190214555 73412534 73412533 73412599 66 CTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.............x...x..x.x........::...........:.:....--.:...:.... 54M2D10M 53/64 82.8% 64/94230402 0.0% 2/64 3.1% 55215395 NA +3031 chr4 + 190214555 73423669 73423668 73423747 79 GGCCTCTTAGATCTTTGTCTATTAATTCACATACTTATTTTATCCTTATTAGTTTGTGTTTTTAAAATTTTTATCAAAT chr4 - 94230402 26748817 26748816 26748895 67481508 67481507 67481586 79 GGCTCTTTTTTTTTTTTTCTACTCGTGCACAAACTTCTACTACCTATATTAGTTTGTGTTTGTAACATTTCTCTTCAAT ...:::..xxx.:...x....:.x:.x....x....x.x:..:.:x...............x...x....:.x.:x... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 46674852 NA +3075 chr4 + 190214555 73449656 73449655 73449691 36 ATTGCTTCTCAGCCTTTTGGCTAAGATCAAGTGTAG chr4 - 94230402 56292881 56292880 56292916 37937487 37937486 37937522 36 ATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAG ..........:x........................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 17156775 NA +3136 chr4 + 190214555 73459518 73459517 73459592 75 CTTCCAATCTCTTTATTTTATTTTATTTTATTTATTTATTTATTTATTTATTTTTTTTTTTGTATTATACTTTAA chr4 - 94230402 17604077 17604076 17604151 76626252 76626251 76626326 75 CTTTCATCCTCTTTATTTTATTGTATTTTTTTTGTCACTGTGGCCATGTTTTCTTTGTTTTGTTTTGTTTTTTAA ...:..x:..............x......x...:.:xx.x.:x::..x.x..:...x......x..:.x:..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 55855441 NA +4744 chr4 + 190214555 73460924 73460923 73461234 311 CCCCTCCCCCTTCCCCTCCTCCTTCCCCTCCCCCTCCCCCATCCCCCTCCCCCCTCTCCCATCACCCTCCCCCATCTCCCTCCCTTTCCCTTCTCCCCCTTCTTCTCCCCCCCACTTCCCCTCCCCCTCCCCTTCCCTTCCCTCCTCGCCTTCC--TCCTCTTCCTCTT-----CTTCTTTCTTCTTTCTTCTTTCTTCTTTCTT-----------CTTT-------------------------------------------------------------------------CTTCTTCTTTC-----------------------------TTTCT-----------------TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCTCTTTTTCTTCATCTTC----------ATTTTCTTTCTCCTCTTTCTCTTC chr4 - 94230402 84694559 84694558 84695013 9535390 9535389 9535844 455 ctcctctgcctcctcggcctcttcttccgcccctgccacca--cctcttcttcctctgcca-cagcctcttccacctctaccacctcttccccctctgctccatctcccccaccttccccatctacccctccttcctgtccctctgctctgccaggtccttttccCACTGGTGAATTTTCTTTTGATTTTTCTTTTGGGTTTTTTGGATTGCACAACTTTGCTGTAGTCGTGGTCTCCATCAATGTAATCCTGATCTGTTCTAGATGTTGATTCAGAGTCTGAATCAGAGCCACTTCTGCTTTCAGAACTTGAACTAGATCCTGATTCCCCACTTTCTGATGAAGACAAACCAGATTTTTCCTTTAATTCTCTTTTCTTATTTTCTTCTTCCTCTGCCTCTCCCTCCTCTAGATGCTCATCTTCTGATGTACTTATTAGCTTCCTCTTCACTCCTGTC .:....:x...:.:.xx....:.:::..x....:x..x...--..:..:.::.....x...-..x....::...:...:x:.x.:.:::.::.::.:x..:.x........x.x:.:...x..:x..:.:......:x......:x.x.:x:.x--....:....:x:.-----x..:.:.:..xx..:......:xxx...:..-----------....-------------------------------------------------------------------------.....x.....-----------------------------.....-----------------..:...:.:.xx....::..::.:x.:.............x.....:........xxx.x:........----------...xx...:...:..x:..::x.. 41M2D18M1D92M2I13M5I31M11I4M73I11M29I5M17I69M10I24M 205/308 66.6% 455/94230402 0.0% 150/308 48.7% -11233635 -82996767 +3550 chr4 + 190214555 73460966 73460965 73461094 129 CCCCCTCCCCCCTCTCCCATCACCCTCCCCCATCTCCCTCC-CTTTCCCTTCTCCCCCTTCTTCTCCCCCCCACTTCCCCTCCCCCTCCCCTTCCCTTC---------------CCTCCTCGCCTTCCTCCTCTTCCTCTTCTTC chr4 - 94230402 93339637 93339636 93339780 890623 890622 890766 144 CCCCATCCACTCTCCTCCATCACC-TCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCTGGACTTC ....x...x.:...::........-..:xx:x.......x.-..:..::......x:.:x.....:..::.:..:::.....::....:x.::..::..---------------..:....x..xx.x...::..x..xxx.... 24M1D16M1I57M15I31M 84/128 65.6% 144/94230402 0.0% 17/128 13.3% -19878671 -74351731 +4408 chr4 + 190214555 73461079 73461078 73461239 161 CCTCTTCCTCTTCTTCTTTCTTCTT----TCTTCTTTCTTCTTTCTTCTTTCTTCTTCTTTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCT-----CTTCCTCTTCCTCCTCTTTTTCTTCATCTTCATTTTCTTTCTCCTCTTTCTCTTCTCCTT chr4 - 94230402 45185582 45185581 45185750 49044653 49044652 49044821 169 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTT-TTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT .:.x..x...x.:...::.....:.----..xx:.....x...:x.........-.......x..:..:x:::........::.:.xx:.....:::....:x..-----....::x:.x..:x.....:.xx:..:.:::.x.:....x:..:.:.:...:.xx..:.. 25M4I25M1D50M5I60M 102/160 63.8% 169/94230402 0.0% 10/160 6.2% 28275497 NA +4402 chr4 + 190214555 73461097 73461096 73461314 218 TCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTCTTTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCTCTTTTTCTTCATCTTCATTTTCTTTCTCCTCTTTCTCTTCTC-CTTCTTCTCCTTCTTCCCCTCTTCTCTTTCTCTTGGTCTTTCTCCTCCTCTTTCATTCTCTTCTCTTTAATATTTTAG chr4 - 94230402 45185590 45185589 45185753 49044650 49044649 49044813 164 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCT--------TTCTTCTTTCTTTAACTCTTCC-------------------------CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCA----------------------CCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAG ..x.:..:.:....:..xx.:..xx:.....x....x..........::.:.:x..:...x:..--------........:..:.xx.......-------------------------.......x::.xx:x......-..x...x..:....xx..x----------------------.:...xx...:.:.....:...........x...... 64M8D22M25D21M1I19M22D37M 118/163 72.4% 164/94230402 0.0% 56/163 34.4% 28275507 NA +3038 chr4 + 190214555 73461134 73461133 73461235 102 TTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCTCTTTTTCTTCATCTTCATTTTCTTTCTCCTCTTTCTCTTCT chr4 - 94230402 69039967 69039966 69040068 25190335 25190334 25190436 102 TTCTTCTCTCCTTTTTCTACTGTTTTATACCTCTCATCTCTGTCTATTCTCTCTTACATTTCTTCTCTACCACATTTGATTTTTTTCTTTTCTCTCTCATCT .....:::.:...:....x..x:..:x.x::::..x...::x..:x:.::.....x.x::....:.::x:..:x..::x...:.....::...:....x... 102M 59/102 57.8% 102/94230402 0.0% 0/102 0.0% 4421167 NA +4071 chr4 + 190214555 73461147 73461146 73461341 195 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCTCTTTTTCTTCATCTTCATTTTCTTTCTCCTCTTTCTCTTCTCCT---------TCTTCTCCTTCTTC----------CCCTCTTCTCTTTCTCTTGGTCTTTCTCCTCCTCTTTCATTCTCTTC---TCTTTAATATTTTAGAATGTGAAAACCTTTTTAAGCTCATAT chr4 - 94230402 2456274 2456273 2456487 91773916 91773915 91774129 214 CCTCTACTCATTTTTCTTACTCTTAAAATGTATTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGTTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTCTTCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACTGTTCCTGTGCATTTTCTCTCAGCACCTTCCCGTCTTCATTATTCTTCCATTTT---GCCTCCTGAAATTCATAT .:...x..:x..:.....x:....xxxx.x:x.:....::..::...:..x.x.:...x......x...::.:...x.::..:x...x....---------........x.:.x.----------.:....:..x..:..x:..x..:.x:x.x.::...:...x:x:....---....:.x....:.xxx..x.x---:...::.x..::...... 92M9I14M10I47M3I21M3D18M 122/192 63.5% 214/94230402 0.0% 25/192 13.0% 71004873 NA +3087 chr4 + 190214555 73461191 73461190 73461290 100 TCCTCTTTTTCTTCATCTTCATTTTCTTTCTCCTCTTTCTCTTCTCCTTCTTCTCCTTCTTCCCCTCTTCTCTTTCTCTTGGTCTTTCTCCTCCTCTTTC chr4 - 94230402 28727263 28727262 28727362 65503041 65503040 65503140 100 TCCTGCTTAGCTTCAGCAATCTCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCTTCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTCC ....x:..xx.....x.xx:x.:::...x.:...::..x:...:.:.::x.x..:x.........:x.:.x....x....xx....:..::.:...:.:. 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 44733928 NA +3020 chr4 + 190214555 73480608 73480607 73480680 73 CTGCAACCTCTGCCTCCCAGGTTTAAGTGATTCTCATGCCTCAGTCACCTGAGTAGCTGGGATTACAGGCGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.::....:.....x...x..x.x.....:.x::::.........:.:....x.:... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 55283482 NA +4137 chr4 + 190214555 73484382 73484381 73484548 167 AAATTACCTGTAAGTAAATTGCTTGTGTTTCTTTTCCTTT--------TATC----TTATGTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC-----------TTTCTTT---CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCTTTTTTT chr4 - 94230402 40218619 40218618 40218810 54011593 54011592 54011784 192 AAATAGCTTGGAAGTGAGATGCTTCTTTTGCTATTCTTTTGTAAAGAATAACGGAATTAAGTTTTTTTTTTT-TTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ....x:.:..x....:.:x.....x.x..x..x...:...--------..x.----...x..:...:...:.-..:...:x.:....x....:.:..-----------...:...---....xx:x:....x::...::..x:.x.x.....xxx.x.:..:...:......x........x:..:.....:. 40M8I4M4I16M1D24M11I7M3I75M 115/166 69.3% 192/94230402 0.0% 27/166 16.3% 33265763 NA +3808 chr4 + 190214555 73484415 73484414 73484508 94 TTCCTTTTATCTTATGTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCAT chr4 - 94230402 18988810 18988809 18988901 75241502 75241501 75241593 92 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTT--TTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCAT ...x..x.x:.......:..x........xx:::.x...:..........:...--.........x...x.xx...:.x:..:..x...x:... 54M2D38M 67/92 72.8% 92/94230402 0.0% 2/92 2.2% 54495605 NA +3285 chr4 + 190214555 73484419 73484418 73484503 85 TTTTATCTTATGTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 41570552 41570551 41570636 52659767 52659766 52659851 85 TTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCT ......:.xx....:....x::.:...:...............xx..:x:x.xx:::x...:::....:.xxx............ 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 31913867 NA +3442 chr4 + 190214555 73485526 73485525 73485603 78 GAAGAAGCAGAAAACAAGGAGAAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGAGAAGGAGAAGGAGAAGAGGAAGAGG chr4 - 94230402 35568986 35568985 35569063 58661340 58661339 58661417 78 GAAGCTGCAAGAGACAAAGCCATGGAAGAGGAAAGCACTGAACAGAAGAAAGAGAGGGAGAAGAAGAAGAGGTCGAGG ....xx...::.:....:.xx.x...::....:::x.xx..:x..:.........:.......:........xx.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 37916540 NA +3056 chr4 + 190214555 73485610 73485609 73485676 67 AAGAGGAAGAAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGGGGAGGAGGAGGAGGAGGAGGA chr4 - 94230402 59322148 59322147 59322214 34908189 34908188 34908255 67 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGA ..........x..x..x...x.x.xx.:x..xx....:.....:.x...:...........::x... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 14163462 NA +3915 chr4 + 190214555 73492798 73492797 73492907 110 AAAAAAAAAAAAAGAATATTTATTAATTTAAAGTTTATTAGTAATGTAATATAATCCAGGGACTTTACTGTTTTTTTTTTTGTTGTTGTTTGTTTTTTTTATCTCCTGGA chr4 - 94230402 14581334 14581333 14581438 79648965 79648964 79649069 105 AGGAAGGAAAAGACAATAATT-TTGATTT----TCTATTGATATTTCAAAATAACTTAAAAACCCTTCAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTTGGA .::..::....:.x....x..-..:....----.:....::..x.x:..x....:::.:::..::.x.x.........x................x....x.x.::.... 21M1D7M4D77M 74/105 70.5% 105/94230402 0.0% 5/105 4.8% 58911464 NA +3051 chr4 + 190214555 73530276 73530275 73530346 71 AGTATGATACAACAAAATAATAATAAATTATAAAATATAATTAAATTTTATTTAATAATATTCATTAAATA chr4 - 94230402 23183832 23183831 23183902 71046501 71046500 71046571 71 AGTCTGTTCAAAAAAGATCATAATAAATTGAAAAGCAAAATGAAATTTTATTTAATATTACCTGCTGAACA ...x..x.xx..x..:..x..........:x...::.x...x...............x..:::::.:..:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 50346444 NA +3501 chr4 + 190214555 73543015 73543014 73543139 125 ATCCATTATAAACATAGAT-------ATGTATAGTATAGAAATATATATATAGAAATATAGTATGGAAATATATACTATATATTCTATATAGTATAGAAATATATAGAAAT-----ATACATAGTATATATAGTATA chr4 - 94230402 62847291 62847290 62847424 31382979 31382978 31383112 134 ATATATTATATACAGAGATTATATAAGAATATATTATAGAGAGATATATGTAGAATTTAAGTAGAGAAATACATGACATCTATTCTCTA---TATGACAATGTATTGTGGTTGACAACCCATTATATACCTAGTATA ..x:......x...x....-------:x:....x......:.x......:.....x.xx....x:......:..:x:..x......x..---...::x...:...x.x::.-----.:x...x:....:x....... 19M7I63M3D19M5I21M 86/122 70.5% 134/94230402 0.0% 15/122 12.3% 10695724 NA +3180 chr4 + 190214555 73543748 73543747 73543787 40 TAGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 9151854 9151853 9151893 85078510 85078509 85078549 40 TAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .........................x....x.:....... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 64391894 NA +3073 chr4 + 190214555 73569228 73569227 73569276 49 TGAAGGTTTTTTCTTTTTTTCTTTTTCTTTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 61894412 61894411 61894460 32335943 32335942 32335991 49 TGATGCATTATTTTTTTTTTCTTTGTCTTTGTGTGCGTGTGGGTGTGTG ...x.xx..x..:...........x..........:.....x....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 11674816 NA +3018 chr4 + 190214555 73615148 73615147 73615222 75 CAGCCTGGGTGATAGAGTGTGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAGCAAAACAAATAAACAAACAAAA chr4 - 94230402 14097411 14097410 14097485 80132918 80132917 80132992 75 CAGCATGGATTTTAAAATGTTTTTTTCCCTAAAAAACAAACAAAAAAAAACATCCAAACAAACACAGAAGCAAAA ....x...:.xx..:.:...xx:.:.x:..x.....x...x.........x.x.x.......:.x.x..:..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 59517737 NA +3013 chr4 + 190214555 73636529 73636528 73636613 85 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ......x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.:...:.:.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 36778236 NA +3080 chr4 + 190214555 73636551 73636550 73636646 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x:::.:.x.x.....:x..x..::.:.:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 12301850 NA +3080 chr4 + 190214555 73636555 73636554 73636650 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x...:xx..x:::.:.x.x.....:x..x..::...:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 12301854 NA +3025 chr4 + 190214555 73636563 73636562 73636663 101 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x...:xx..x:::.:.x.x.....:x:.x.:::...:.x..:..........::. 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% 12301862 NA +3891 chr4 + 190214555 73636578 73636577 73636701 124 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG--AAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG .:.x.:....:..........::.:.:......:...xx.x..:.:..x:.::.xxx...--.....xx....x.:.::..x::.....:.....:.:..x:xx:.....---..:..:..x.... 60M2I48M3D13M 80/121 66.1% 123/94230402 0.0% 5/121 4.1% 43103414 NA +3473 chr4 + 190214555 73636583 73636582 73636678 96 GAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x.....:..:x:::....x:xx..x...:xx..x.::...x.x...:.:x:.x...:...:.x..:........ 96M 63/96 65.6% 96/94230402 0.0% 0/96 0.0% 12301882 NA +3153 chr4 + 190214555 73636601 73636600 73636666 66 AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGA chr4 - 94230402 9237695 9237694 9237760 84992643 84992642 84992708 66 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.:..x.x..x.:......:..:x..x.:...:.....:....:....:..:...:.::.::... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 64398906 NA +3036 chr4 + 190214555 73636621 73636620 73636674 54 GAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGA chr4 - 94230402 27809323 27809322 27809376 66421027 66421026 66421080 54 GAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAA ....:..:.::...x:....x...::......x...:...:......:....:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 45827298 NA +3086 chr4 + 190214555 73636636 73636635 73636729 94 AGAAAGAAAGAAAGAAAGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAA chr4 - 94230402 10862983 10862982 10863076 83367327 83367326 83367420 94 AGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACAAAACAGAGAAGAAAGGAAGAGACAAAACAAA .....:...:...:...:..:.:x..:.::.x.:...x..x:.xx....:x:x.xx.x.x.x...:x.::....:........:.x....x... 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 62773653 NA +3910 chr4 + 190214555 73636651 73636650 73636808 158 AAGAAAGAGGGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGG--AAGGGAAGGGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAA chr4 - 94230402 44053977 44053976 44054136 50176267 50176266 50176426 160 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAA--GAAAGGAGAGCAGTGAGACAGAAA ...::.x.x.x:.....x.:.--.........::...:.::x......:x::.:.:.x::.xxxx...........::.:.x....:x...x:x.::........:.:--..x.x..::.x:..x:::x.......--.......:..x.:x.::.x:.... 21M2I85M2I26M2D24M 97/156 62.2% 160/94230402 0.0% 6/156 3.8% 29582674 NA +3286 chr4 + 190214555 73636652 73636651 73636735 84 AGAAAGAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x..xx..x.....x...::...:.........:.x..x.:xx..:::::......:.:x..::.x..:.:..::..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 36778358 NA +3064 chr4 + 190214555 73636669 73636668 73636767 99 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGGAAGGGAAGGGA chr4 - 94230402 61334701 61334700 61334799 32895604 32895603 32895702 99 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA ......:.....x......x.:x...:.:.::x:.:.::.x.xx.:x....xx.:x.....:x.x..:...x..x:....x.:.x:.....::.::... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 12301968 NA +3224 chr4 + 190214555 73636682 73636681 73636766 85 AAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGG----AAGGGAAGGG chr4 - 94230402 32280615 32280614 32280703 61949700 61949699 61949788 89 AAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAAAGGG ...:...:...............:....x.xx.:.:.:.:x..:..x:..:x.x.:.....:x:x.:...x..:.----...::..... 75M4I10M 58/85 68.2% 89/94230402 0.0% 4/85 4.7% 41356067 NA +3320 chr4 + 190214555 73636710 73636709 73636801 92 GAAGGAAGAAAGAAAAGAAAGAAAAGGGAAGGAAGGGAACAGAAGGGAAGGGAAGGGAAGGAAA--GGAAAGGAAAGGAAAGGAAAGGAAAGGA chr4 - 94230402 10903376 10903375 10903469 83326934 83326933 83327027 94 GAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ...:.:............x......:x.x.:...x:..::x...x.:...:...:.:....:::--:.....:x..:..x:.x:..x:..:.:. 64M2I28M 60/92 65.2% 94/94230402 0.0% 2/92 2.2% 62733334 NA +3232 chr4 + 190214555 73650872 73650871 73650949 78 GTCCATATACATATATAAATAGAAATAATGTGTATATATATATATATATATATATATATATATATATATATATATAAG chr4 - 94230402 19793066 19793065 19793143 74437260 74437259 74437337 78 GTCCATATCTAGATGCATACAAGTACAACATGCACATATACACAGATGAACGTGCATATATGTACATATATAAATAAG ........x:.x..::.x.:.::x.:..::..:.:.....:.:.x..:x.::.::......:..:.......x..... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 53857806 NA +3046 chr4 + 190214555 73650877 73650876 73650941 65 TATACATATATAAATAGAAATAATGTGTATATATATATATATATATATATATATATATATATATA chr4 - 94230402 50291207 50291206 50291271 43939132 43939131 43939196 65 TAAACAGAAGTAAATAAACACACTTTGTATTTCCATATGTGCATATATACATATGTATATATACA ..x...x.x:......:.x.:.x.x.....x.x:....:.::.......:....:........:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 23359670 NA +3161 chr4 + 190214555 73673013 73673012 73673071 59 TTGGCATTAATTAATTTTGTCTTTTTCTTTTTCTTTTTTTTTTTTTTTGGAGATGGAGT chr4 - 94230402 188178 188177 188236 94042167 94042166 94042225 59 TTGGCATTACTTCATTTTGTTTTTTCCCCTATATTTTTCCTTCTTTTGGGAGAGGGTGT .........x..x.......:....:.::.x.x.....::..:....x.....x..x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 73484835 NA +3052 chr4 + 190214555 73674190 73674189 73674261 72 TATATATATATATATATACGTGTATATATATATACACGTATATATATATATACACATATATATACGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x.....x:::...:.....:....:....:.::...:xx.....x..x:....:.:.::x...... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 21192954 NA +3162 chr4 + 190214555 73674229 73674228 73674337 109 ATATATATATATACACATATATATACGTATATATATACATATATACGTGTATATATACATATATATATACACGTATATATATATACATATATATATACACGTATATATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATA .:.......:.:.....:.:.x:x..:..:::..:x:x:.x.::..:.....xx.x:...x..x........:...x...x....:::---:.:.x....xx.:..... 88M3D18M 67/106 63.2% 106/94230402 0.0% 3/106 2.8% 69256880 NA +3029 chr4 + 190214555 73699768 73699767 73699824 57 CTTTTCTTTCTTCTTTTTCTTCTCTCCATCCTTTCCTCCTTTTCTTTTTTCCCTCCT chr4 - 94230402 29300176 29300175 29300232 64930171 64930170 64930227 57 CCTTTCTGTTTCCTTCTGCCTCTTTTCACCACTTCTGCCTTTTTTTTTTTTCCTCCT .:.....x.:.:...:.x.:...:.:..:.x:...:x......:......:...... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 44399592 NA +3341 chr4 + 190214555 73706879 73706878 73706932 54 TCAAGCTTTTTTCAAAAAAAAAAACAACAAACAAAAAAAACCCACAACATTCTA chr4 - 94230402 34778275 34778274 34778328 59452075 59452074 59452128 54 TTAAGTTGTTTAAAAAAAAAAAATGAACAAACAAAAAAAACGCACAACATTTTA .:...:.x...xx..........xx................x.........:.. 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 38928604 NA +6266 chr4 + 190214555 73724218 73724217 73724392 175 CAGGCTGGCTCACCCTTTCTTGGGCAAACTGGTGGTTCCCCTGCTCCCCGGAGGTCACCATATTGATGCCAAACTTAGCGTGGACACCCAATTGGCATAGTGCACTATAGCCCAGAACTCCTGGACTCAAGTGATCTTCCTGGCTCAACCTCTCAAGTAGCTGGGATTACAGGTG chr4 - 94230402 18197025 18197024 18197196 76033207 76033206 76033378 172 CAGACCCGCT-GTCTCTCCTCAGACAGCCTTGTGAC-CCCAAGCTCTCTGCAG-TCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ...:.:x...-::.::.:..::.:..:x..x...::-...xx....:.:.x..-.......::..:x:x..::.....x.::x...:.::x.......x:..:x...:......:.:..:....::.......x.::x.xx......:...:............:.:....x... 10M1D25M1D16M1D121M 114/172 66.3% 172/94230402 0.0% 3/172 1.7% 55527193 NA +3129 chr4 + 190214555 73757791 73757790 73757843 53 ACACATATATATACACCATATATATGGTGTATATATACACACACACATATATA chr4 - 94230402 59708339 59708338 59708391 34522012 34522011 34522064 53 ACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ......x........:..x..x.x:x...............:.....:.:.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 14049452 NA +3386 chr4 + 190214555 73757802 73757801 73757880 79 TACACCATATATATGGTGTATATATACACACACACATATATATCTATATATACACACACACACACATATATATATCTAT chr4 - 94230402 48865233 48865232 48865311 45365092 45365091 45365170 79 TACAACACCTAGATTTCTTGCTTATACACTTTCAAATATATTCCTATATATAAAGACATACATACATAGATATATCTAT ....x..:x..x..xx:x.::x.......x:x..x......x:.........x.x...:...:.....x.......... 79M 57/79 72.2% 79/94230402 0.0% 0/79 0.0% 24892569 NA +3548 chr4 + 190214555 73778770 73778769 73778841 72 CTACAACCTTTGCCTTCTGGGTTCAAGGGATTCTCACGTCTCAGCCTCCCAAGTAATTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:..:xx:x..............x.x...x..x.x........::......::...:.:....x.::. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 55581644 NA +3079 chr4 + 190214555 73788329 73788328 73788408 80 AGGATGAGGAGAAGGAGGAGGAGGAG------AAGGAGGAGGATGAGAAGGAGGAGGATGAGGAGGAGGAGGAGAAGGAGAAGGAG chr4 - 94230402 49393628 49393627 49393710 44836693 44836692 44836775 83 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGA---CGTGAAGGAGGAGAAGAGGAAGAAGGAG ....:..xx....x.:.....x....------....x:...:x::.....:x...---:.x.:........:...:.:........ 26M6I23M3D28M 57/77 74.0% 83/94230402 0.0% 9/77 11.7% 24394701 NA +3030 chr4 + 190214555 73788338 73788337 73788420 83 AGAAGGAGGAGGAGGAGAAGGAGGAGGATGAGAAGGAGGAGGATGAGGAGGAGGAGGAGAAGGAGAAGGAGGAGAAAAAGGAG chr4 - 94230402 49393628 49393627 49393710 44836693 44836692 44836775 83 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAG ..:.x..xx..:.x.:.:...x.....x.xxx....x:...:x::..:..:x...x.x.......:..:..::...:...... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 24394710 NA +3130 chr4 + 190214555 73788377 73788376 73788453 77 AGGATGAGGAGGAGGAGGAGAAGGAG------AAGGAGGAGAAAAAGGAGGAGGAGAAGGAGGAGGAGGAGAAGGAGAAGGAG chr4 - 94230402 49393628 49393627 49393710 44836693 44836692 44836775 83 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAG ....:..xx..:.x.:....:x....------....x:....xx...:..:x...x:x.:........:...:.:........ 26M6I51M 55/77 71.4% 83/94230402 0.0% 6/77 7.8% 24394749 NA +3145 chr4 + 190214555 73788715 73788714 73788763 49 ACATTTGAAGTATCTACTTTTTTCTTTGATAAACGTGGACTCAAAAATT chr4 - 94230402 44886170 44886169 44886218 49344185 49344184 49344233 49 ATATTTAAAGAACCCACCTTTTTCTTTAATGAATGTGGACTCCAAAATT .:....:...x.:.:..:.........:..:..:........x...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 28902545 NA +3114 chr4 + 190214555 73806000 73805999 73806086 87 CAAAAGAAAAGAAATAAACAGAATCAGAGCTGAACTGAATGAAATGGAGATTAGTAGAACTATGCAAAAGATCAACAAAACCAAAAG chr4 - 94230402 86704087 86704086 86704173 7526230 7526229 7526316 87 CATAATAACAGAAATTAGAATTTCCAAAGCAGGGATAAATTAAATAAGGATTTGTAAAACAAAACAAAAGAGCAAAGAAACCAAAGG ..x..x..x......x.:x.xxx:..:...x.::x.:...x....:::....x...:...x.x:.......x...x:........:. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% -12898087 -81332315 +3550 chr4 + 190214555 73855014 73855013 73855121 108 CAGAAACGCTTTCCAACTCAAGTTCTCTAATACATCTGCAAAGATATATATATAT-----ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 8681872 8681871 8681982 85548421 85548420 85548531 111 CAAAATAGCTTTTTGAAACAAGAAGTTT--TACAACAACTAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTT ..:..xx.....:::.xx....xxx.:.--....x.x:.x..:..:x....x:..-----.....x..........:...::.:.:.:...:.....x:.:............ 28M2D25M5I53M 74/106 69.8% 111/94230402 0.0% 7/106 6.6% 65173142 NA +3376 chr4 + 190214555 73855056 73855055 73855120 65 GATATATATAT---ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681916 8681915 8681983 85548420 85548419 85548487 68 GATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x:..:.---.....x..........:...::.:.:.:...:.....xx.:............. 11M3I54M 51/65 78.5% 68/94230402 0.0% 3/65 4.6% 65173140 NA +3496 chr4 + 190214555 73855058 73855057 73855169 112 TATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTG---CCATGT-TAAGCAACACATTCATAGTGTCCAGAGAGTAGAACACAAGG chr4 - 94230402 71856854 71856853 71856968 22373435 22373434 22373549 115 TATAATGACATGTATACATTTGCATGTTTATATATGTATGAAAATACATTTTTCTTTTTTTTGTGATCCCACGTGTCAGCAATA-ATCCACAGTATTCATTTAGAAAATTAGAAGG ....xxx.:..:....:..x.::..:.x.......:...:x.x...:......:........x..---...:..-.x.....:.-..:..:...:.:..xxx..x.:.x:.x.... 65M3I6M1I9M1D31M 78/111 70.3% 115/94230402 0.0% 5/111 4.5% 1998204 NA +3008 chr4 + 190214555 73855063 73855062 73855116 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 65173133 NA +3222 chr4 + 190214555 73855065 73855064 73855118 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 65173135 NA +3009 chr4 + 190214555 73855070 73855069 73855122 53 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTG chr4 - 94230402 92735348 92735347 92735400 1495003 1495002 1495055 53 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG .::....x.....:...:..:.:..........x.x..:.x.........:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -18880278 -75350124 +3063 chr4 + 190214555 73855072 73855071 73855121 50 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735397 1495006 1495005 1495055 50 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT .::....x.....:...:..:.:..........x....:.x......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% -18880276 -75350126 +3095 chr4 + 190214555 73855074 73855073 73855121 48 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735395 1495008 1495007 1495055 48 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTT .::....x.....:...:..:.:...............:.x....... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -18880274 -75350128 +3444 chr4 + 190214555 73858640 73858639 73858713 74 TATATGTATGTGTGTATGAA--TGTATGTATATATTTCCACACATACAGATACATACACACTCACACAAACATAAA chr4 - 94230402 8395789 8395788 8395864 85834539 85834538 85834614 76 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA .:.:..........:..:..--.....x..:....x.x::.x:.:.:x:.....:......x......:...:... 20M2I54M 54/74 73.0% 76/94230402 0.0% 2/74 2.7% 65462851 NA +3094 chr4 + 190214555 73861663 73861662 73861713 51 TCTCAAAACAAACAAACAAACAAACAAAAA-AAAAAAAAAAAAAAAAAATAT chr4 - 94230402 72570653 72570652 72570704 21659699 21659698 21659750 52 TCATGAAGCAAACAAAGAAACAAACAAAAATAAAAAAGAAAGGAAAAAATAT ..x::..:........x.............-......:...::......... 30M1I21M 43/51 84.3% 52/94230402 0.0% 1/51 2.0% 1291010 NA +3202 chr4 + 190214555 73861665 73861664 73861745 81 TCAAAACAAACAAACAAACAAACAAAAAAAAAAAAAAAAAAAAAAATATAAAAACAATAACCACCCCTCCAAAAAAAAATC chr4 - 94230402 18021888 18021887 18021968 76208435 76208434 76208515 81 TCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTCATCTCTTTAAATAATGACC ...:..x..:x..............x..x..x..x.........x.x:x...:.x...xx:..:.:..::...x..x:.:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 55839777 NA +3001 chr4 + 190214555 73861676 73861675 73861728 53 AAACAAACAAACAAAAAAAAAAAAAAAAAAAAAAATATAAAAACAATAACCAC chr4 - 94230402 12885754 12885753 12885806 81344597 81344596 81344649 53 AAACAAACAATCAGAAAAAAAAAAAAAAAAGTGACTATGAAAAAAAAGAACAC ..........x..:................:x:.x...:....x..x:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 60975922 NA +3240 chr4 + 190214555 73889758 73889757 73889828 71 TTTTAAAATTTCTCTGCGATTCTCTTTCCTTAAAATTTTTCTCAGTAGAAATTTATTGAAATAAAACAAAA chr4 - 94230402 82154426 82154425 82154496 12075907 12075906 12075977 71 TTCTCCAAATTCTTTAGGACATTATTTTCTTGAAGCTTTTCTCAATAAGAATTTAATCAAACAAAACAAAA ..:.xx..x....:.:x..:x:.x...:...:..::........:..::......x.x...:......... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% -8264668 -85965734 +3349 chr4 + 190214555 73900314 73900313 73900460 147 CTGTTGTGAGCATTAAATTGAGTA-ATTCA------------TGTCAAGAGTTTAAAATAATGTTTGACATTT-----------AATAGGGATACATAAACGTTTACACACACACACACACACACACACACACACACATATATATATATATATATACCTTGGAGAGAAATG chr4 - 94230402 87372641 87372640 87372809 6857594 6857593 6857762 169 CTGTTTTAAAAGTTACACTGTGTATATTCAATCTGAATTCTGTGCCACGAGTTAGGAAACATGCTGAGTAATTTTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT--CTTGAGGAATTATG .....x.:.:x:...x.:..x...-.....------------..:..x.....x::..xx...:.x:::.x..-----------:...:.::x.x.x..x::...x..x...........x.........:x:.:..:...:..::.......x.--....::..:xx... 24M1I5M12I31M11I71M2D14M 97/145 66.9% 169/94230402 0.0% 26/145 17.9% -13472327 -80758075 +3270 chr4 + 190214555 73961085 73961084 73961184 100 GTCCAT-TAAACCTCTTTTTCTTTATAGCCAGTCTTGGGTACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGT chr4 - 94230402 53202535 53202534 53202628 41027775 41027774 41027868 94 GTCCATATCAATCTCTTCCTCG-------CGTTCCTAGGTGAATGTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTTGTGAAGTGAAAT ......-.x..:.....::..x-------.:x..:.:...:x..x.:...:.::.....:.::............::.:x..:......x...:::.:.:. 6M1I15M7D72M 63/93 67.7% 94/94230402 0.0% 8/93 8.6% 20758550 NA +3365 chr4 + 190214555 73961096 73961095 73961170 75 CTCTTTTTCTTTATAGCCAGTCTTGGGTACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 43521134 43521133 43521208 50709195 50709194 50709269 75 CTTCTTTTCTTTGAAAACAGTCTTTGGTCCACCATTTTGTTTGTTTTTTCTTTTCCTTTTCTTCTATGTGCTTCT ..::........:x.:x.......x...x..:.x....x...x......:....::....:..:.x.x.x:..:. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 30439962 NA +3183 chr4 + 190214555 73982154 73982153 73982231 78 CCAAGATTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAA chr4 - 94230402 30973292 30973291 30973369 63257034 63257033 63257111 78 CCTAGGATGCTGTGAAAGCTAAAAAGACTAAAAAAAGAAAAAAAGAAAAAAATGGAGCACTGAAAAGAATGGAAGAAA ..x..:x.:.::x:...:xx.....:.xx.......:.......:.......x::..x.xx........x.:...... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 43008862 NA +3050 chr4 + 190214555 73982155 73982154 73982221 67 CAAGATTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGA chr4 - 94230402 72165091 72165090 72165157 22065246 22065245 22065312 67 CACGATGACCAAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATAAGGAGAAAGAA ..x...x.......x.....x..:.:.......:.......xxx.x..::....x:.::.....::. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 1817064 NA +3153 chr4 + 190214555 73982167 73982166 73982235 69 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAA chr4 - 94230402 78376854 78376853 78376922 15853481 15853480 15853549 69 AAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAGTCAGGAATAAAGAAA .............x..xx.x.:....x......x..x..x...:..x..x:...xx..:..x....... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% -4394687 -89835715 +3172 chr4 + 190214555 73982169 73982168 73982253 85 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGCTCTGGG chr4 - 94230402 32025543 32025542 32025627 62204776 62204775 62204860 85 AAAAAGACCCACAAAACACATACACACAAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAG .....:.xxx.x....x.x.x.x.x.x....x.:..x.....:.:......::.......:....x.:.:::.:...::.:..:. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 41956626 NA +3000 chr4 + 190214555 73982171 73982170 73982239 69 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 78376854 78376853 78376922 15853481 15853480 15853549 69 AAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAGTCAGGAATAAAGAAA .............x..xx.x.:....x......x..x..x....:.x.:x:...xx..:..x....... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -4394683 -89835719 +3233 chr4 + 190214555 73982193 73982192 73982255 63 AAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGCTCTGGGCA chr4 - 94230402 30533164 30533163 30533226 63697177 63697176 63697239 63 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACA ...x.....::..:..........:::..:.......xx.x:.:....x........x:.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 43449029 NA +3676 chr4 + 190214555 73987305 73987304 73987382 78 CTGTACAATTTTCTTGATTCTGGGAGCATCTGGGTCCAGGCAGATTTTCCTCCCATCCTTCAGTGTGGCTCTGCAAAA chr4 - 94230402 41781907 41781906 41781984 52448419 52448418 52448496 78 CTTTACGATCAGCTGTACCCAGGGAGCAGTGGGGTCCAAGCACACCTCTCTTCCATCCTTTAGAGTAGCTCTGCAAAA ..x...:..:xx..xx.::.x.......x:x.......:...x.::.::..:........:..x..:........... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 32205398 NA +3190 chr4 + 190214555 74019337 74019336 74019444 108 TTATATATATTTATATATATATTTATATATATTTATATATATATT--TTTATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATTTAT chr4 - 94230402 37291710 37291709 37291819 56938584 56938583 56938693 110 TTTTATATGCATATACATCTGCATGTACAGAATAATGAATACAGTATCTGTTATATATTTGAATACATATAAAAGCATATATTCATTTATATTTTAATATATCTATGTGT ..x.....::x....:..x.::x.:..:.x.x.x..:x...:.x.--:.xx.........:x...:....xx.x::.......:..x.....x..x......x...x.:. 45M2I63M 72/108 66.7% 110/94230402 0.0% 2/108 1.9% 36727627 NA +3023 chr4 + 190214555 74019407 74019406 74019478 72 ATATATATATTTATAT--ATATATTTATATATATATTTATATATATATTTATATATATATTTTATATATATATT chr4 - 94230402 1888773 1888772 1888846 92341557 92341556 92341630 74 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATT .....:....x..:.x--:.::x.:.:.:..:....x..:....:x....:.:..........::...x..... 16M2I56M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% 72130634 NA +3023 chr4 + 190214555 74019407 74019406 74019478 72 ATATATATATTTATAT--ATATATTTATATATATATTTATATATATATTTATATATATATTTTATATATATATT chr4 - 94230402 1885632 1885631 1885705 92344698 92344697 92344771 74 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATT .....:....x..:.x--:.::x.:.:.:..:....x..:....:x....:.:..........::...x..... 16M2I56M 51/72 70.8% 74/94230402 0.0% 2/72 2.8% 72133775 NA +3833 chr4 + 190214555 74019443 74019442 74019566 124 ATATATATATTTATATATATATTTTATATATATATTTTTATATATATATATTTTTATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA----------GGGATTATT-AGTTATTGTCTGACTCTCTCATT chr4 - 94230402 33398780 33398779 33398914 60831489 60831488 60831623 135 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaactgttgaatcatagcctgaacctctgatt .....:.:.:x.::::.:.x.::x....x..:.....xx.x:.:.:::.:.x.x....:.:.......:.x.............x.....x.----------..:.:.:..-.:.:..x.:....x:....x... 92M10I9M1I23M 82/124 66.1% 135/94230402 0.0% 11/124 8.9% 40620663 NA +3543 chr4 + 190214555 74019445 74019444 74019539 95 ATATATATTTATATATATATTTTATATATATATTTTTATATATATATATTTTTATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGGGAT chr4 - 94230402 33398780 33398779 33398874 60831529 60831528 60831623 95 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGAT .....:.:x:..::::.:.xx::.....x..:.x....x.x:.:.:::.x.x.:....:.:.......x.x.............x.....x:... 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 40620665 NA +3079 chr4 + 190214555 74019497 74019496 74019546 50 TATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGGGATTATTAGT chr4 - 94230402 12340926 12340925 12340975 81889428 81889427 81889477 50 TACATAAAAATATATGGAGAGAAAGAGAGCAAAAGAGAGGGATGATTAAT ..:...x.x......:......:......x:.:..........x....:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 61678571 NA +3121 chr4 + 190214555 74074824 74074823 74074898 75 CCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAGAGTGCAGGATGTTTTCAGGAATGGAAG chr4 - 94230402 44540668 44540667 44540742 49689661 49689660 49689735 75 CCACCTCATTTTTTTTTCTTTGTTTTTAATCTTTTTTTCTTTTGAGATAATATAAGTTATGTCTCAGCATGAAGG ......:x.........:...x.....xx.:.......:...x....x.:.::.:.x.:.x.::x:.x...:.:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 29534156 NA +3023 chr4 + 190214555 74147645 74147644 74147707 63 TCTTTCCAATTTCTCCACATCCTCCCAACACTTGTTATTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 61605805 61605804 61605867 32624536 32624535 32624598 63 TCTTCACTTTTTCTCCAAATTTTTTCTACTCTTGTGGTTTTGTTGGTTTGTTTTTTTTTTTTT ....:x.xx........x..::.::.x..x.....x:.......x........x...x..... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 12541840 NA +3519 chr4 + 190214555 74149998 74149997 74150094 97 AAGAGAGAGACAGAGAAAGAGAGAGAAATAATGGAAGAAGAGTAAGAGAGGGATTTCGACAT----TCTTGGCTTTGAAGATGGGGGAAGGGTGCCAACAA chr4 - 94230402 32247542 32247541 32247642 61982761 61982760 61982861 101 AAGAGCAAGATATAAAGAAGAAGGGAAATGATGCAATAAGAGTAAGGGAGAGATTTAAAGTTAATGTATTGGCTAAGGGACTGTGGAAGGGGAGCCAAGAA .....x:...:.x.:.:.:::..:.....:...x..x.........:...:.....x:.xx.----.x......xx.:::x..x..:.:...x.....x.. 62M4I35M 66/97 68.0% 101/94230402 0.0% 4/97 4.1% 41902456 NA +3312 chr4 + 190214555 74189453 74189452 74189514 62 ATGGCAGCATTGAGCAAGCAGTGTTTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTAAAG chr4 - 94230402 35683214 35683213 35683269 58547134 58547133 58547189 56 ATGACAGCA------AAGTAGTGCTTCCCCCCCTTCCTTTTTTTTTTTTTTTTTTTGTAAAG ...:.....------...:....:..::.::....::...................x..... 9M6D47M 46/56 82.1% 56/94230402 0.0% 6/56 10.7% 38506239 NA +3051 chr4 + 190214555 74263093 74263092 74263145 53 ATATATGTGTATATATGTATACATATGTATGTATATTTATGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x:.::......:::..:....x.:.....:..:............... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 54558819 NA +3044 chr4 + 190214555 74267273 74267272 74267324 52 TTTTTTCTATTCTATTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCT chr4 - 94230402 14228685 14228684 14228736 80001667 80001666 80001718 52 TTTTTTCTATCTAAATTTTTTCTTTTCTTTTTTTTTCCCTCTCTGCCTTTTT ..........::x.x.:..............:.....::...:.x:....:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 60038588 NA +3794 chr4 + 190214555 74267281 74267280 74267447 167 ATTCTATTCTTTTCTTTTCTTTTCTTTTCTTTCT------TTCTCTTTCTCTCTTTCTTTCTTCCTT----------TCTTTCT------CCTTTCTTTCTTCCTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTTCTTCTTTCTTTGACAGCATATCACTTTGTTG chr4 - 94230402 9693677 9693676 9693855 84536548 84536547 84536726 179 ATTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTC----------CTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTTGACAAGGCCTCATTCAGCTG ...:..x.:...x.:..::.xx...:...:.:.:------....x...x...:.:....xxx.x...----------.:..x..------.:.:.:::...:......:..........:x:...----------:.x...:.x.:x...:........:::..:.:......:x::x...:.:x.:.. 34M6I27M10I7M6I35M10D54M 103/157 65.6% 179/94230402 0.0% 32/157 20.4% 64573604 NA +3309 chr4 + 190214555 74267311 74267310 74267397 87 TTCTTTCTCTTTCTCTC-----TTTCTTTCTTCCTTTCTTTCTCCTTTCTTTCTTCCTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTTCT chr4 - 94230402 19053884 19053883 19053975 75176428 75176427 75176519 92 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACT ...:...::.x..:...-----......:x.....:.:.....:xx..:..x......:::.:........:.x:...x.x..:.x..:x.. 17M5I70M 60/87 69.0% 92/94230402 0.0% 5/87 5.7% 55213427 NA +3410 chr4 + 190214555 74267341 74267340 74267430 90 TTCTTTCTCCTTTCTTTCTTCCTTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTTCTTCTTTCTTTGAC chr4 - 94230402 45185583 45185582 45185669 49044734 49044733 49044820 87 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCAC---CTTTCTTCTTTCTTTAAC ..x..x...x...::::::.:.:.xx...:xx..:.:.x:...x................x..:..:x.---...............:.. 69M3D18M 61/87 70.1% 87/94230402 0.0% 3/87 3.4% 29081758 NA +3082 chr4 + 190214555 74277807 74277806 74277874 68 TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTCTGAGATAGGTAGCCTAGGTTCATTTAACCATTCCTCT chr4 - 94230402 25641674 25641673 25641741 68588662 68588661 68588729 68 TTTTTTGTTTGTTTGGTTGGTTGTTTTTTTTTAAGAAGGGCAACCTTGGCTTGTTTTATTATACATTT ..x............x...x......x...:.:...x:..:.:...x..:.::...x.::..x.x.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 48636133 NA +3007 chr4 + 190214555 74290965 74290964 74291037 73 TAAGATTAGCTTCCTGTCTTACATTTATTTTTCCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 11601286 11601285 11601358 82629045 82629044 82629117 73 TGAGATTTGTTTTCTGGCCCTCATTTTCTTTTCCATACTTCAAATTTTGCCTTTTTTTTTTTTCTTTTTTTAA .:.....x.:..:...x.::x.....x:......x.x::.:xxx....x::............:.......:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 62689679 NA +3345 chr4 + 190214555 74301496 74301495 74301560 65 ATCATCCACAGAAGTATTCGTCTAAGTGAGTGTGAGCGTGTGTGTGTGTGTGTGTGTGTGTGTCT chr4 - 94230402 70212903 70212902 70212967 24017436 24017435 24017500 65 ATTATTCATAGATGTACTCCTCTAAGTGTGTAGGGGTGTGTGTGTGTGTATATGTTTATTTATTT ..:..:..:...x...:..x........x..:x.:.:............:.:...x.:.x.:.:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 4088593 NA +3314 chr4 + 190214555 74355438 74355437 74355520 83 CCACAACCTCCACCTCCCGGGTTCAAGCAATTCTTCTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx.x..:.:.........::x...x:xx.x........:..:.........:.:..:.--.:..::....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 56158312 NA +3831 chr4 + 190214555 74370538 74370537 74370649 112 TTTTCTTCTCTCTCTTTCACATTTTTATCTCTTATTATATTATTATATTATTCAGTATTAACTGAAGATATTTGTGTGTGTGTGTGTGTGAGAGAGAGAGATAGAGAGAGAG chr4 - 94230402 18982258 18982257 18982354 75248049 75248048 75248145 97 Ttttcttttcttttttctttctttctttctttttttttctctctctctctctc---------------tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .......:...:.:..::x:x...:.x...:..x..x.x.:x:.x.x.:x:..---------------.x.:.............................x......::.. 53M15D44M 70/97 72.2% 97/94230402 0.0% 15/97 15.5% 55388280 NA +3270 chr4 + 190214555 74370540 74370539 74370651 112 TTCTTCTCTCTCTTTCACATTTTTATCTCTTATTATATTATTATATTATTCAGTATTAACTGAAGATATTTGTGTGTGTGTGTGTGTGAGAGAGAGAGATAGAGAGAGAGAG chr4 - 94230402 18982258 18982257 18982354 75248049 75248048 75248145 97 Ttttcttttcttttttctttctttctttctttttttttctctctctctctc---------------tctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..:.::.:...:...:x:x.:...x.:....x..x.x.:x:.x.x.:x:..---------------.x.:.x................x..........x........::.. 51M15D46M 67/97 69.1% 97/94230402 0.0% 15/97 15.5% 55388282 NA +3284 chr4 + 190214555 74370608 74370607 74370645 38 TTTGTGTGTGTGTGTGTGTGAGAGAGAGAGATAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ............:..................x...... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% -7258454 -86971948 +3559 chr4 + 190214555 74373628 74373627 74373771 144 ATATATATTTATATATAAGTAAT------------ATATGTATATATGTGTTCATA---------TATATTTATATATAAGTAATATTTATAAGTATATATGTATGTATATATATAAGTATATACGTGTGCGTATATATATCTATACACACACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGT----------GTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..:.x..x...:....:x.------------.x...:..x.:.::::...x.---------.::.........x.:..:x.:.xx.:.x:x....:.x.::..----------..::.:......::.......:.x.:.:.....::............. 23M12I21M9I42M10D48M 90/134 67.2% 155/94230402 0.0% 31/134 23.1% 59408898 NA +3392 chr4 + 190214555 74373696 74373695 74373798 103 ATAAGTATATATGTATGTATATATATAAGTATATACGTGTGCGTATATATATCTATACACACACACACACACACACACATATATA------------TACTCTCTGAAAAGTAGG chr4 - 94230402 8395788 8395787 8395900 85834503 85834502 85834615 113 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAAT--ACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAG ..:x..:...:...:::..x.:..:..xx..:...:..:...x..:..xx..--.:...............x.....x..:x...------------...x:....:x..:..:. 52M2D31M12I18M 71/101 70.3% 113/94230402 0.0% 14/101 13.9% 65977908 NA +3856 chr4 + 190214555 74373700 74373699 74373782 83 GTATATATGTATGTATATATATAAGTATATACGTGTGCGTATATATATCTATACACACACACACACACACACACATATATATA chr4 - 94230402 8395790 8395789 8395870 85834533 85834532 85834613 81 GTGTGTATGTGTGCATAAACAT--GTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.....:..:...x.:..--....x...:.:..::.::x..:..:x...................x.....x..:x... 22M2D59M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 65977910 NA +3399 chr4 + 190214555 74400963 74400962 74401084 122 CCTTCCTTCCTTCCTTCCTTCTTTCTTCCTTTCTTTCTTTTTCTCTTTCTTTCTTTCCTTCTTTCTCTCTTTCTGTCTTTC----------------TCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:..:xx.x:x..:.....:...x.x...:xxxx:x:.x..:..:::....:..::..:.:....x.::..:..x..:.----------------...x.:...:.:.............x.xx:.::........ 81M16I41M 77/122 63.1% 138/94230402 0.0% 16/122 13.1% 31319076 NA +3947 chr4 + 190214555 74400972 74400971 74401080 109 CTTCCTTCCTTCTTTCTTC------CTTTCTTTCTTTTTCTCTTTCTTTCTTTCCTTCT-----TTCTCTCT---TTCTGTCTTTCTCTTTCTCTCTTTCTCTCTCTC--TCTCTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.........x.x....------..x..::..:.....::...:.....:..x::..-----...:x.:.---.....xx:....x.....:...:..........--.xx..::........ 19M6I34M5I8M3I33M2I15M 82/109 75.2% 125/94230402 0.0% 16/109 14.7% 31319072 NA +3490 chr4 + 190214555 74401011 74401010 74401151 141 CTTTCTTTCCTTCTTTCTCTCTTTCTGTCTTTCTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCCTTTTTTGTTTTTTTGTCTTGCTCTGTTGCCCAGGCTGGAGTGCACTGGCACAATCATAG chr4 - 94230402 15266896 15266895 15267032 78963371 78963370 78963507 137 CTTTCCCACCCCCCTTCTCATTTTCAGGCTTTATTTCCTTAACCTTTGATTTCAGTCTTACTTTTTCTACATTTTTCTTAACTTTTTTCTTTTCTT-TTTTGCTCTACTG---AAGCAGGGGTTCAGCTCCTCAATAAAAG .....::x..::.:.....x:....x.x....x.:.:::.xx.:..:xx.:..xx...:x....:.:.x:x.:......xx.......x....:..-.:.......::..---.:..x..:..x..x:xx.x....x.x.. 96M1D13M3D28M 87/137 63.5% 137/94230402 0.0% 4/137 2.9% 59134115 NA +3144 chr4 + 190214555 74406928 74406927 74407003 76 TCAAAAAAAACAAAACAACAACAACAACAACAACAAAAACAAGAAAAAAAGGAGTAAGGAGCAGATAGTGGGAGAT chr4 - 94230402 94076864 94076863 94076931 153472 153471 153539 68 TCAAAAAAAAAAAATAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAG--------AGAGAGAGAGAGAT ..........x...xx.x:x...:.:..........x.....:......::...--------...x..x.:..... 54M8D14M 53/68 77.9% 68/94230402 0.0% 8/68 11.8% -19669936 -74560466 +3068 chr4 + 190214555 74421806 74421805 74421860 55 AGGAGGGGAAGGGGAAGGAAGATGGGGAGGAAAAGAGAAAGAAGAAAAAAGAAGA chr4 - 94230402 59863355 59863354 59863409 34366994 34366993 34367048 55 AGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAAAA ..:.::::......::...:.:x.......:..:.........x.....x...:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 14558451 NA +3211 chr4 + 190214555 74421828 74421827 74421973 146 TGGGGAGGAAAAGAGAAAGAAGAAAAAAGA-AGAAAAGGAGGATGCTAATGGGGAGGAGGAGGAAAAGGAAGAGAAAGAGGGAAGAAGAGAGGAAGAAA--------GGAAGGAAAGAAGGACAAAAGAAAGAAAACACATACATTAAGGCTCTT chr4 - 94230402 40465774 40465773 40465919 53764484 53764483 53764629 146 TGGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAG---------GGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGAGCCTAAAAACAATAGCTATT ...:..:.::.x..x..::.x..:.....:-...:...x.:.---------....::x..:x.x::...:..:........:...:....:....:..:--------.:..xx...xx.::....x.x...:.:.:.x:.x.x.:x.x:...x.. 30M1I11M9D48M8I48M 87/137 63.5% 146/94230402 0.0% 18/137 13.1% 33956054 NA +3055 chr4 + 190214555 74476908 74476907 74476990 83 GAGCAAAACTCCATCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGTAATATAGAGAATTAAAGAATTTCAGAAGAA chr4 - 94230402 90750599 90750598 90750681 3479722 3479721 3479804 83 GATTAGAAATCCTTCACAGCAAAAAAAAGAAGAAGAAGAAGAAAATAGAGAGACTTGCAAAATGTTGAGAGATTGAAGAAGAA ..x:.:..x...x..x...x........:..:..:..:..:....x...:..xxx.::.:.:x:..:.:::...xx....... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% -16273691 -77956711 +3904 chr4 + 190214555 74495516 74495515 74495629 114 CATACACACATATATACACACATATATACACATATATACACATATATACACATATATATACACATATATATACACACATATATACACACACATATATATACTCACATATACACA chr4 - 94230402 73121100 73121099 73121213 21109190 21109189 21109303 114 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.:::..:::....x..:...:.........x.x::.::x:..:....::...x:..:..:x:.....:.:x::.......x.:..:.x..:.x.x.:..x..::....x:.. 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% 1374416 NA +3475 chr4 + 190214555 74495518 74495517 74495628 111 TACACACATATATACACACATATATACACATATATACACATATATACACATATATATACACATATATATACACACATATATACACACACA-TATATATACTCACATATACAC chr4 - 94230402 4417346 4417345 4417457 89812946 89812945 89813057 112 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x...:.....:.......:.:.x:x.....:::.::x:x:.x.:.....:...xx.x:...x..x...:........x..:x:.:.::-:.:.x.:...x.......x.. 90M1I21M 71/111 64.0% 112/94230402 0.0% 1/111 0.9% 70078172 NA +4605 chr4 + 190214555 74495528 74495527 74495684 157 TATACACACATATATACACATATATACACATATATACACATATATATACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACACACACACACACACACATATATATATATATATATTTTTTTTT chr4 - 94230402 73121075 73121074 73121228 21109175 21109174 21109328 154 TGTACACCCACAGAAAC---TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTT .:.....x..:.x.x..---.:..xx.x.:.:.::.::.....x:...........:.:.x.x:...:x:....:..::...x:..:..xx::....:::x::...:.:.x.:..:.x....x.x........:....x::.x..x.x:..x..... 17M3D137M 96/154 62.3% 154/94230402 0.0% 3/154 1.9% 1374453 NA +3051 chr4 + 190214555 74495543 74495542 74495606 64 ACACATATATACACATATATACACATATATATACACATATATATACACACATATATACACACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x.........:..:.:x.:::x.:....x......::...:.:.:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 56974794 NA +3594 chr4 + 190214555 74495544 74495543 74495653 110 CACATATATACACATATATACACATATATATACACATATATATACACACATATATACACACACATATATATACTCACATATA----CACACACACACACACACACACACACACA chr4 - 94230402 73121100 73121099 73121213 21109190 21109189 21109303 114 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:::.::..:..:..x:...........:.:.x.x::..:x:....:..:....x::....:x:.....:.:xx:.......----.:.x....x.x.......:::.:.x:.. 82M4I28M 69/110 62.7% 114/94230402 0.0% 4/110 3.6% 1374444 NA +3162 chr4 + 190214555 74495546 74495545 74495621 76 CATATATACACATATATACACATATATATACACATATATATACACACATATATACACACACATATATATACTCACA chr4 - 94230402 66904846 66904845 66904921 27325482 27325481 27325557 76 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCA .......::..:..:.:.......:.:.:........x..x::x..x:.:......xx..:.:::..x.x...x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 7590700 NA +3233 chr4 + 190214555 74495553 74495552 74495618 66 ACACATATATACACATATATATACACATATATATACACACATATATACACACACATATATATACTC chr4 - 94230402 17520749 17520748 17520814 76709589 76709588 76709654 66 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCC ...x.......x...:.x...:...:.:..:.:x.::.x::....x.....::...........:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 56974804 NA +3142 chr4 + 190214555 74495571 74495570 74495645 75 ATATACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.::::..:.:.::.:.x....:...x:...:.::...::x...x:xx...:...............x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 66099783 NA +3142 chr4 + 190214555 74495573 74495572 74495647 75 ATACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:::::...:.:.:..:.x.:..:..:x:...:..:...::x:x..:xx...................x..... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 66099785 NA +3252 chr4 + 190214555 74495575 74495574 74495639 65 ACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA .:.:..:..::........:...:............x..x::...x:.:..:...xx..:..:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 7590728 NA +3265 chr4 + 190214555 74495575 74495574 74495643 69 ACACATATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACA chr4 - 94230402 7596413 7596412 7596479 86633924 86633923 86633990 67 ATACAGATGCATACAAATGTATATACACACGCATGTATACA--AACATATACTTACGCACGCACGCTCA .:...x..::.....x.::...........:...:....:.--x........x:..:...:...:.x.. 41M2D26M 50/67 74.6% 67/94230402 0.0% 2/67 3.0% 66899162 NA +3165 chr4 + 190214555 74495577 74495576 74495624 48 ACATATATATACACACATATATACACACACATATATATACTCACATAT chr4 - 94230402 28470367 28470366 28470414 65759989 65759988 65760036 48 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAAT ......:........x.:..:..::......:...:.........x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 46025210 NA +3472 chr4 + 190214555 74495580 74495579 74495649 70 TATATATACACACATATATACACACACATATATATACTCACATATACACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:::..:.x.:..::.:x:......:...:.::....xx.:.................x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 66099787 NA +3473 chr4 + 190214555 74495593 74495592 74495667 75 ATATATACACACACATATATATACTCACATATACACACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:..:.x....:...x...x:.::...:.x:...:xx.:.................x.....x..:x... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 66099797 NA +3020 chr4 + 190214555 74495622 74495621 74495679 58 TATACACACACACACACACACACACACACACACACACATATATATATATATATATTTT chr4 - 94230402 87372741 87372740 87372798 6857605 6857604 6857662 58 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ...x:x..x...........x.........:x:.:..:...:..::.......x.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% -12877119 -81353283 +3205 chr4 + 190214555 74495634 74495633 74495688 55 CACACACACACACACACACACACACATATATATATATATATATTTTTTTTTTGAG chr4 - 94230402 87372747 87372746 87372801 6857602 6857601 6857656 55 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAG ..x...........x.........:x....::...:..::...x.x...:..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -12877113 -81353289 +3338 chr4 + 190214555 74537083 74537082 74537136 54 CTGTCTGTGTGTGTGTGAGAGAGAGAGAGAAAGAGAAACAGAATTGAATGTGTG chr4 - 94230402 18982314 18982313 18982367 75248036 75248035 75248089 54 ctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTG ....x............x............:.....::x..:...x.x.x.... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 55554769 NA +3042 chr4 + 190214555 74537084 74537083 74537120 37 TGTCTGTGTGTGTGTGAGAGAGAGAGAGAAAGAGAAA chr4 - 94230402 18982317 18982316 18982353 75248050 75248049 75248086 37 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ...x.........................:....:.. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 55554767 NA +4080 chr4 + 190214555 74560412 74560411 74560589 178 ATGACTATATATAT-ATAATGCATATTATATAATATATTTTATATTATATATAATATATATTATATATAATATATTTTATAT--TATATATAATATATATTATATATAATATATAAGTTATATAATATATATTACGTATATTATATATAATATGGTATATTATATATATTATATATTATAT chr4 - 94230402 20596466 20596465 20596639 73633764 73633763 73633937 174 ATTACCATGTATATCATAACAT-TATAACGTGaaataatattta------ataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGTTGTCTTATATCTCTACAATGTGATAT ..x..:..:.....-....:::-...x.::.:.x...x.x.x..------.....x.:.......x.xx.x...:......x--:................:....xx..:..x.x.........x:..:.x.x::x.x:..xx....xxx...x.:.x......x.x.xxx..:.x.... 14M1I7M1D21M6D32M2I97M 117/171 68.4% 174/94230402 0.0% 10/171 5.8% 53963946 NA +3541 chr4 + 190214555 74560566 74560565 74560731 166 TATTATATATATTATATATTATATATATGTTTTATAATATATATTATATATATTATATATTATATATATATTTTATAATATATATTATATATTAACTAAAATATGTTCTATTATATATTATATAT---AATATGTTATATAATATATATTAACTATAATATGTTATATT chr4 - 94230402 67910059 67910058 67910221 26320182 26320181 26320344 163 TATTACATATACAATAC--TAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATA---TACATGTGAGATAAATTTAAGCTGATTAAATATCA-ACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATT .....:.....:x...:--..x.x....::.x.xx:...:...x..x.......:.....x:........x.x.:..:....---..:..:.x.:x....x.xx:x::x....x....:.-.:..---....::.xxx.x..x....x...x:x..:.:.:::..:... 17M2D63M3D35M1D4M3I41M 105/160 65.6% 163/94230402 0.0% 9/160 5.6% 6650507 NA +3626 chr4 + 190214555 74560672 74560671 74560860 189 TCTATTATATATTATATATAATATGTTATATAATATATATTAACTATAATATGTTATATTTTATATATTATATAT--TAACTATAATATGTTATATTATATATATTATATATAATATATAATATGTTATATTATATATTATATATAATATGTTATATTATATATAATATATAATATGTTATATTATATATT chr4 - 94230402 48211463 48211462 48211643 46018760 46018759 46018940 181 TTTATCATAT-CTATACATACGAC------TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACA--GCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT-TAACATAAAATGTCTTAAAAAATCACTGATTTTCTATATT .:...:....-:....:...xx.:------........x:..xx..:x:...:....x...............::--..x:...x....:.:.:.--::.....::.....::..x...:.xx::..:x..x....::x:...xx.:x..-.x.:..x.x..:.xx..x.x...xxx.x..x..x...... 10M1D13M6D45M2I18M2D53M1D40M 117/179 65.4% 181/94230402 0.0% 12/179 6.7% 26349209 NA +3846 chr4 + 190214555 74560726 74560725 74560886 161 TATATTTTATATATTATATATTAACTATAATATGTTATATTATATATATTATATATAATATATAATATGTTATATTATATATTATATATAATATGTTATATTATATATAATATATAATATGTTATATTATATATTATATATAATATGTTATATTATATATT chr4 - 94230402 48211489 48211488 48211643 46018760 46018759 46018914 155 TATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCA-----TATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT-TAACATAAAATGTCTTAAAAAATCACTGATTTTCTATATT ......:...:..:.:.......x..x.x....:......xx:.-----...x...x......x.:.xxx....::.....:x..x...:.xx::..:x..x....::.:...xx.:x..-.x.:..x.x..:.:x..x.x...xxx.x..x..x...... 44M5D71M1D40M 102/155 65.8% 155/94230402 0.0% 6/155 3.9% 26349237 NA +3475 chr4 + 190214555 74562580 74562579 74562673 94 GTTTATATATTATAATTTACAT----ATTATAATTTATATATTATAATTTACATATTATTATATATGATATATGATATATAATATATATTATTATATA chr4 - 94230402 56109686 56109685 56109779 38120624 38120623 38120717 94 GCCTCTGTATTATGGTTCACATTACTCTCATAATTTGC----TCTACTTTACATATTATTACATATTATGTATAGTGTATAATATTACATATTATGTA .::.x.:......::..:....----x.:.......::----.x..x..............:....x..:...::.:........xxxx......:.. 22M4I12M4D56M 66/90 73.3% 94/94230402 0.0% 8/90 8.9% 18452894 NA +3025 chr4 + 190214555 74562705 74562704 74562753 49 TATATAATACTATATATTATATATGATATATAATACTATATATTATATA chr4 - 94230402 56109731 56109730 56109779 38120624 38120623 38120672 49 TACATATTATTACATATTATGTATAGTGTATAATATTACATATTATGTA ..:...x..:..:.......:...::.:.......:..:.......:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 18452974 NA +3143 chr4 + 190214555 74565152 74565151 74565229 78 GGAGATCGAGAC-----CATCCTGGCCAACAAGGTGAAACCCCATTTCTACTAAAAAAAAAAAAAAAAAAATACAAAAAAAAA chr4 - 94230402 34388164 34388163 34388246 59842157 59842156 59842239 83 GAAAATCCAGACATCTTCATTCTGGACAATGAATTGATTCTACATTTCTACATTTAAGGAAAAAAAAAAAACACAAAAAACAA .:.:...x....-----...:....x...::.:x...xx.:x.........xxxx..::............:........x.. 12M5I66M 57/78 73.1% 83/94230402 0.0% 5/78 6.4% 40176988 NA +3011 chr4 + 190214555 74565187 74565186 74565230 44 CCCATTTCTACTAAAAAAAAAAAAAAAAAAATACAAAAAAAAAT chr4 - 94230402 78955861 78955860 78955904 15274499 15274498 15274542 44 CCCTTTTCTGTTAAAAAAAAAAAAAAAAAAGTACTGAAAAGAAT ...x.....::...................:...x:....:... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -4390674 -89839728 +3579 chr4 + 190214555 74589144 74589143 74589196 53 AAAAGAAAAGGGA-AGGGAAGAGGAAGGGGAAAGGAAAGGAAAAAGAAAAGGAC chr4 - 94230402 19799670 19799669 19799723 74430680 74430679 74430733 54 AAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGAC ...:......:..-.......:..:.......:::..........:........ 13M1I40M 45/53 84.9% 54/94230402 0.0% 1/53 1.9% 54789474 NA +3703 chr4 + 190214555 74589541 74589540 74589729 189 GAAGGGAGGGAGGGGA-------GAGAAAGAAAGATAGAGAAAGAAAGAAGGAAAGAAAAA----GAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAG----AAAGAAAAGAAAGAAAAAAAGAAGGAAA-----AGAAAGAAAGAAAAGGAAGGA--------AGGAAGAAGGGAAGGAAGCAAGGAA chr4 - 94230402 4547797 4547796 4548013 89682390 89682389 89682606 217 GAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA ..::..x.....x:..-------..x.x.....:xx.....x....x:...::..:x.:::----...:..:.......:....:..xxx:..:.x.....x...:....xx...:...x.:::.:----...:x.:...x.:.xx..x....xx..:-----x......:..::x:::x.:..--------.:::....:::..:.x.......:. 16M7I38M4I61M4I28M5I21M8I25M 119/189 63.0% 217/94230402 0.0% 28/189 14.8% 70041744 NA +3843 chr4 + 190214555 74589578 74589577 74589753 176 AAAGAAGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAAG------AAAGAAAGAAAAGGAAGGAAGGAAGAAGGGAAGGAA----GCAAGGAAGGGGGAGAAATAAAGG-AAGAATGT chr4 - 94230402 72111981 72111980 72112161 22118242 22118241 22118422 181 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAG-----AAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGAC-ATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGT .:.....:.::..:..x:...:......:.x.x....x..x:.x.x:x:.x....x.:....-----....:x..xx:..x:.....x::....x::...::......------..::......:...x.xx.....x-.x.:....:..----:...::..:x.:x..x.::.x:..-........ 62M5D41M6I24M1D11M4I24M1I8M 111/170 65.3% 181/94230402 0.0% 17/170 10.0% 2477597 NA +4813 chr4 + 190214555 74589583 74589582 74589729 147 AGGAAAGAAAAAGAAAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAA-AAAAAGAAGGAAAAGAAAGAAAGAAAAGGAAGGAAGGAAGAAGGGAAGGAAGCAAGGAA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .:...x.:.::.......:.::...:...x......:x::...:.x::.xxxx..............::x..:..x...x.x......-.:......x:.x:x:....x::.x::.x:.......:...:..:.x..x:..xx..:.. 88M1I59M 94/147 63.9% 148/94230402 0.0% 1/147 0.7% 30535594 NA +3068 chr4 + 190214555 74589591 74589590 74589684 94 AAAAGAAAGAGAGAAAGA--AGAAAAGAAAGAAAGGAAGAAA---GAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAA chr4 - 94230402 51550768 51550767 51550866 42679537 42679536 42679635 99 AAAAGACAATGATAAATGCCAGAAAATAAATAATATCAACAGCCCAAAAAGAAGAATGGAGGAAAAAGAGGGGGAAAAAAAAAAAAACAAGCAGGAAAA ......x.:x..x...x:--......x...x..x:xx.:x.:---:...:......x.:.:....:.:..:::.....:...:....x...x....... 18M2I22M3I54M 65/94 69.1% 99/94230402 0.0% 5/94 5.3% 23038823 NA +3953 chr4 + 190214555 74589597 74589596 74589730 134 AAGAGAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAG----AAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAAGAAAGAA------AGAAAAGGAAGG---AAGGAAGAAGGGAAGGAAGCAAGGAAG chr4 - 94230402 44053989 44053988 44054133 50176270 50176269 50176414 145 AAGAATGGAGGAG--AAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAG ....:x.:.:..:--.......::.....::x......:x::.:.:.x::.----:.............:.x...:.x:..x.x..:...x........------.:..:x..:x..---.........:...::.x..::..:x.. 13M2D36M4I44M6I12M3I27M 90/132 68.2% 145/94230402 0.0% 15/132 11.4% 30535608 NA +3048 chr4 + 190214555 74589601 74589600 74589679 79 GAGAAAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAG-----AAAGAAAGAAAGAAAGAAAAGA-AAGAAAAAAAGAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ......x.:xx..x.....x....:...:......:..:.x..-----....::....:..:::x.::..-.......:..:... 43M5I22M1I14M 57/79 72.2% 85/94230402 0.0% 6/79 7.6% 37731308 NA +3139 chr4 + 190214555 74589605 74589604 74589696 92 AAGAAGAAAAGAAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAAGAAAGAAAGAAA chr4 - 94230402 36858285 36858284 36858376 57372027 57372026 57372118 92 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x..x.x:.....x.:xx:.x.....x....:...:.........:.x..x.:xx....::....::.:::x...:.x.::..:.:.:... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 37731320 NA +3215 chr4 + 190214555 74589616 74589615 74589721 106 AAAGAAAGGAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAAAAAGAAGGAAAAGAAAGAAA--GAAAAGGAAGGAAGGAAGAAGGGAAGGAA chr4 - 94230402 58035036 58035035 58035143 36195260 36195259 36195367 108 AAACAAAAGAGGGGGCAAGGGAAGCAAATGAGTAAATTTAAAACAAACAAAGGAAAAAAAGAAAAACAAGAAAGAAAATGCTATTGGAAGATGAAAAACACGAAGGAA ...x...:..:.:::x..:.....x..:x:..x..:xxx:...x...x:..:...........::.x..........--.xx.xx.:.:..x.:..:.x:x....... 77M2I29M 69/106 65.1% 108/94230402 0.0% 2/106 1.9% 16554580 NA +3879 chr4 + 190214555 74592945 74592944 74593062 118 AAAGAAAAAGAAAGAAAGAGAGAGAGAGAGAAAGAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:........:.::::.:....:.:.:.----....:.:x:..:.xxx:.:.x.....xx....x.-.....x:.:....:.....:.:..x:xx.:..::.....:..x.... 37M4I34M1I47M 78/118 66.1% 123/94230402 0.0% 5/118 4.2% 44059781 NA +3024 chr4 + 190214555 74592973 74592972 74593077 105 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAG----AGAGAAAGAAA----------GAAAGAGAGAGAGAAA chr4 - 94230402 44400476 44400475 44400594 49829809 49829808 49829927 119 AAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA .:...x....x:x.x:x.x:..::..:::.:::..:....:...........:...........x:::x..:..x:..----...:..x.:..----------:...:xx......... 78M4I11M10I16M 69/105 65.7% 119/94230402 0.0% 14/105 13.3% 30192497 NA +3585 chr4 + 190214555 74593008 74593007 74593127 120 AAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGA-GAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 11253653 11253652 11253772 82976631 82976630 82976750 120 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAG-GAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA .....::..x....:.....x:.x.:.::.:.xxx...x...:.:..:..:::...:..-......-..:..xx.x.x..:...x.:.x::.:..:x....::..x:.....x...x.... 59M1D6M1I54M 77/119 64.7% 120/94230402 0.0% 2/119 1.7% 63339355 NA +3401 chr4 + 190214555 74593012 74593011 74593131 120 AAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 11253653 11253652 11253772 82976631 82976630 82976750 120 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA .....::..x:...:.....x:.x.:.::.:.xxx...x...:....:..:::......:::::.x..:..xx.x:x.::..:x.:.x::...:.x..:.::..x:.....x...x.... 120M 70/120 58.3% 120/94230402 0.0% 0/120 0.0% 63339359 NA +3623 chr4 + 190214555 74593016 74593015 74593135 120 AAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 11253653 11253652 11253772 82976631 82976630 82976750 120 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA .........x:...:.....x:.x.:.:.::.xxx...x.:.:....:..::.......:.:::.x..:.:xx.x:x..:..:x.:.x:.:..::x..:.::..x:.....x...x.... 120M 72/120 60.0% 120/94230402 0.0% 0/120 0.0% 63339363 NA +3213 chr4 + 190214555 74593036 74593035 74593139 104 AGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGA---------AAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ......:.......---------.....x...:.:.x:x..::.x...:xx...x......:.:.:.....::.xx.......x.:.:.x::x...x:..:... 14M9D81M 64/95 67.4% 95/94230402 0.0% 9/95 9.5% 63689661 NA +3370 chr4 + 190214555 74593039 74593038 74593126 88 AAGAAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAAAGGA-AGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858288 36858287 36858376 57372027 57372026 57372115 89 AATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.x..:.:.x..xx..x.....x...:..............:.x.:x.:xx....::....::....-..::.x..::.......:. 69M1I19M 61/88 69.3% 89/94230402 0.0% 1/88 1.1% 37734751 NA +3326 chr4 + 190214555 74593109 74593108 74593209 101 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAGAAAGAAAGAAAGAAGGAAAGAAAGAAATAGAGAAAGAAAGAAAACA chr4 - 94230402 61334701 61334700 61334803 32895600 32895599 32895702 103 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....--..x::..:.x.x.:....x..x..:..:......::.:.:.:..:.:... 51M2I50M 65/101 64.4% 103/94230402 0.0% 2/101 2.0% 13258408 NA +3196 chr4 + 190214555 74607449 74607448 74607531 83 CTACAACCTCCACCTGCCAGTTTCAAGCGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGATTACAGGCATGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx.x..x.::.x......:.x...x.xx.x........:..x.........:.:....--.:..::....:::. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 56410323 NA +3391 chr4 + 190214555 74626959 74626958 74627030 72 TGCAACCTCCATCTCCTGGGTTAAAGCGATTCTCCTCCCTCAGCCTCTTGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197127 18197126 18197198 76033205 76033204 76033276 72 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .:..:..:xx.x..:.......x...:.x...x.xxxx........:.::...........:....x..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 56429832 NA +3072 chr4 + 190214555 74643030 74643029 74643113 84 TAGGTAA---AGAAGCAGTATAACCATGATACTAAAATGAAAAAAGGACAAAAAAAAGAAAAAAAAGGAATTACAAGCTAATTTAAG chr4 - 94230402 6416839 6416838 6416917 87813486 87813485 87813564 79 TAGGTAACATAGAATTTCTATAACCA--------AAAGGGGAAGGGGAAAAAAAAAAAAAAAAAAAGGCTTTAAAAGGTAATTTCAG .......---....x:xx........--------...x.::..::...x........:..........xx...x...x......x.. 7M3I16M8D53M 60/76 78.9% 79/94230402 0.0% 11/76 14.5% 68226191 NA +3228 chr4 + 190214555 74651059 74651058 74651132 74 GGTGACAGAGTGAGACCCTGTCAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGGAAGGGAAGGAAAAGGAAGGGA chr4 - 94230402 37322372 37322371 37322444 56907959 56907958 56908031 73 GGTGAAAGAA-AAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGA .....x...:-:..x..:..:......:..............:.:..::..:::.x...:.:::..:.::x... 10M1D63M 50/73 68.5% 73/94230402 0.0% 1/73 1.4% 37328687 NA +3614 chr4 + 190214555 74651204 74651203 74651365 162 GGAGGGGAGAGGAGAGGAGAGGAGGGGAGGGGAGAGGATGGAATGGGAGGGAGAGGGGGAGGGCCAGGGATGGGAGGGAGGAGGGGGAGGGAGGAGGGGGAGGGAGGAGGGGGAGGGAGGAGGGGGAGGGGAGGGGGAAGGGAAGAAGAAATGTATTCTAGG chr4 - 94230402 1312662 1312661 1312815 92917588 92917587 92917741 154 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGA--------AGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAGACGTGTCTTTCAGG ..x:.....:.:.::x.::x:...::x..:x.:::::...:.x:x:.x:....::.::..x.x:...:..--------..::...:.:...:.....::.x.:.....::::.:x:..:::....:x..x.xx:.x:x..:........x:...x..::... 70M8D84M 84/154 54.5% 154/94230402 0.0% 8/154 5.2% 73338542 NA +3001 chr4 + 190214555 74666561 74666560 74666623 63 GTGTGTATATGTACATGCATATATATGGATACATATACATATATGCATTTAATGTCTGTGTGT chr4 - 94230402 60813610 60813609 60813672 33416731 33416730 33416793 63 GCGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGT .:.:::...:..:..x:...:.:...:x.x.:.....:....:.::..::.:........... 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 13852951 NA +3919 chr4 + 190214555 74795225 74795224 74795285 61 ACAACAACAACATCAGCAACAAAAAAAAAAAAAAAAAAAAAGAAAAGAAATGAAAAAAGTC chr4 - 94230402 12139745 12139744 12139805 82090598 82090597 82090658 61 ACAACAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAAATC ............x..:..........:.::.....x.:..:.....::..x.......:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 62655480 NA +3069 chr4 + 190214555 74846677 74846676 74846738 62 TCAAGCATTTCAATGAATAGCCCTTTCTCAATGAGTCTTGCATTGACTACCCTATTTAAAAT chr4 - 94230402 11413373 11413372 11413434 82816969 82816968 82817030 62 TCAAGAACTACCAGGACCAGCCCTTTCTCAGATAGCCTCACAATGACTACCCCTTTTAAAAT .....x.:.x.x.x..x:............:xx..:..::..x.........:x........ 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 63433304 NA +3986 chr4 + 190214555 74871555 74871554 74871637 83 CTGTAACCTTGAACTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..::.:..:x:.:..:.....:.......x.:.x.xx:x........:............:......--....::....::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 56674429 NA +3498 chr4 + 190214555 74877808 74877807 74877904 97 TGGCATGATCTTGGCTCACTGCAACTTCCACCTCCCAGGTTCAAGTGACTCTCCTGCCTCAGCCTCCCAAGCAGCTGGCACTACAAGAGCACAGCCG chr4 - 94230402 18197114 18197113 18197204 76033199 76033198 76033289 91 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG ......x..x..------..:..:.::xx.x..:.::..........x:..x.xx.x........::....:......x......x.x....x:.:. 12M6D79M 64/91 70.3% 91/94230402 0.0% 6/91 6.6% 56680694 NA +3007 chr4 + 190214555 74878383 74878382 74878431 49 TGGGTGAAAAACAAAAAACAAAACAACAACAACAACAAAAAAAAAAAAC chr4 - 94230402 18021884 18021883 18021932 76208471 76208470 76208519 49 TGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAAC ...:.x.:...x.::.......xx..............x.......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 56856499 NA +3102 chr4 + 190214555 74878389 74878388 74878426 38 AAAAACAAAAAACAAAACAACAACAACAACAAAAAAAA chr4 - 94230402 4027224 4027223 4027261 90203142 90203141 90203179 38 AAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA .....x.......x........................ 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 70851165 NA +3243 chr4 + 190214555 74880975 74880974 74881065 91 AAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAAGAAAGAAAGAGA------AGAAAGGAAGAAAG-----AAAGGGA---GAAAGAAAGATGGTGGAGGCAGG chr4 - 94230402 42895012 42895011 42895116 51335287 51335286 51335391 105 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAATCATGCCAAGTGACTGAAAAGACATAAGGAGGATGCAGG ..::.:.......:......:.......:..x.....:....x....------.....xx.:....x-----x...x..---:.....x.x.x..x...x..... 47M6I14M5I7M3I23M 70/91 76.9% 105/94230402 0.0% 14/91 15.4% 31985963 NA +3345 chr4 + 190214555 74975507 74975506 74975578 72 AGAAATTTTACCAAAACATGCACACCAGAGAAGTTTATAAAATGCATGTATTTCATGAACATGAAGTCAAAG chr4 - 94230402 50484834 50484833 50484903 43745500 43745499 43745569 70 AAAAATTTCATCAACACA--CTACCTATAAAGATTTATGAAATACAGGTATTTTATGAACAAGAAGTCAAAG .:......:.:...x...--.xxx.:.x.:.::.....:....:..x......:.......x.......... 18M2D52M 53/70 75.7% 70/94230402 0.0% 2/70 2.9% 24490673 NA +3421 chr4 + 190214555 74979120 74979119 74979219 100 AAGGAGATAGAGACGCACACACACACACAAAAAAAAACCTTCGAAAAAATCAATGAATCCAGGAGCTGTTCTTTT-TTAAAAAAAATATTAAAATAGACCA chr4 - 94230402 10929375 10929374 10929464 83300939 83300938 83301028 90 AAGGAGGTACAAACACACACACACAAAAAAAAAAAAATCTTTGAAGAAA-----------AGAAATTAAACTTTTATTGCAAATAAAATAAAAAGAGTCCA ......:..x.:..:..........x.x.........:...:...:...-----------..:.::.:xx.....-..:x...x..x..x....x..x... 49M11D15M1I25M 67/89 75.3% 90/94230402 0.0% 12/89 13.5% 64049745 NA +3199 chr4 + 190214555 75030289 75030288 75030352 64 AAAACCTTAATCTCTCTGAGCCTTAACTTCCTCATCTATAAAATGGGAATAATTCTGCCCACCT chr4 - 94230402 66214150 66214149 66214213 28016190 28016189 28016253 64 AAAGACTAAGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCT ...:x..x.::.......x::.x::.:...::.....:...............x:...::.... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 8816139 NA +5641 chr4 + 190214555 75033864 75033863 75033968 105 TGCCCTTCCT-----CCTTCACAGGCAGCATCGCCGCCATTACCGTGACAGTCATTGCCGTGGTGCTGCTGGTGTTTGGAGTTGCAGCCTACCTAAAAATCAGGTGAGAC chr4 - 94230402 58475398 58475397 58475507 35754896 35754895 35755005 110 TGCCCTTTCTGGTGCTCCCTGCAGGCAGCATCGTGGCCATAACCGTGACGGTCATTGTGGTGGTAGTGCTGGTCTTCGGGGCGGCGGCGTACCTCAAGATCAGGTAAGGC .......:..-----:.::::............:x.....x........:.......:x.....:x.......x..:..:.:x..:..x.....x..:.......:..:. 10M5I95M 80/105 76.2% 110/94230402 0.0% 5/105 4.8% 16558466 NA +7399 chr4 + 190214555 75046152 75046151 75046308 157 TTCTCCACCAGGCATTCCTCCTATGGAAGACTTTTGGACGACCATGACTACGGGTCCTGGGGAAACTACAACAACCCTCTGTACGATGACTCCTAACAATGGAATATGGCCTGGGATGAGGATTAACTGTTCTTTATTTATAAGTGCTTATCCAGTA chr4 - 94230402 58476285 58476284 58476416 35753987 35753986 35754118 132 TTCCCCAC-AGGCACTCCTCCTATGGAAGGCTGCTGGATGACCACGACTACGGCTCCTGGGGGAACTATAACAACCCCCTCTACGACGACTCCTAGCAGGAGAA------------------------GATCCTTATTTATCAGCGCTTCCCCAGCA ...:....-.....:..............:..x:....:.....:........x........:.....:........:..x.....:........:..:x:...------------------------.x..:........x..:....x:....:. 8M1D95M24D29M 108/132 81.8% 132/94230402 0.0% 25/132 18.9% 16569867 NA +3174 chr4 + 190214555 75049857 75049856 75049906 50 CTTTTTTTTCTTTTTTTTTTTTTTGGCAAATGAATGTACCATTTCAACTT chr4 - 94230402 44901916 44901915 44901965 49328438 49328437 49328487 50 CTTTCTTTTCTTTTTTTTTTTTTTGACAAATTCCTATTTCATTTCAACCT ....:....................:.....xxx.:.x:.........:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 30147941 NA +3946 chr4 + 190214555 75051994 75051993 75052083 90 AACATCCCTATGAGATAGATA-TTATTAACATCTCTATTGTACAGAAGAGAAAACTAAGGGCCAAAGAGGTAGAGAAAATTACCCAAGGTC chr4 - 94230402 10729172 10729171 10729262 83501141 83501140 83501231 91 AATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.:....:....:...:..-...:..x..x...:...x.....:x.:.......:...xx..x.x....x:..x..x..:....::... 21M1I69M 65/90 72.2% 91/94230402 0.0% 1/90 1.1% 64322822 NA +4432 chr4 + 190214555 75101650 75101649 75101734 85 AATATATCACTCAAACATTAAATAATAATGGGAGCATTCATCT--------TAGAATCACAGTGGTCTCTTGCTTTTATTGTTTCTAAAGTTA chr4 - 94230402 31484473 31484472 31484564 62745839 62745838 62745930 92 AATCTATCATCCAAATATTAA-CAGTAATGGCAGCATTTGTCTCGATATTCTAAGATCACAGTGGTCTCCTGCTTTAACTATTTCTAAAGGTA ...x.....::....:.....-:.:......x......::...--------..::..............:......x.:.:.........x.. 21M1D21M8I42M 68/84 81.0% 92/94230402 0.0% 9/84 10.7% 43617177 NA +4641 chr4 + 190214555 75101824 75101823 75101903 80 GCACAACAGAATATCTTAGCAATGGACTCCGAAGCATGC---------------------CAGAGAAGCATGCATTATAGCTAAAATAAACTTTAAATTAC chr4 - 94230402 31487646 31487645 31487746 62742657 62742656 62742757 101 GTACAACAGAATATCTCGGGAATGGACTCAGAAGTATGCCATGTGATGCTACCTTAAAGTCAGAATAACCTGCATTATAGCTGGAATAAACTTTAAATTAC .:..............::.x.........x....:....---------------------....:x.:.x............::................. 39M21I41M 68/80 85.0% 101/94230402 0.0% 21/80 26.2% 43614178 NA +3050 chr4 + 190214555 75109537 75109536 75109633 97 TCCAATGCTCATCTGCCACCCT-----------GCAAGAATGCAAATTTAACAACATTCTACAACAACAACAACAACAAAAAAAAAACACCTTCATAAGAAGCAAAAT chr4 - 94230402 15430259 15430258 15430351 78800052 78800051 78800144 93 TCCAATACCAGTTTCCTACCATCTTTTTCCTCAGGAAAAATACAAAT---------------AACAACAACAACAACAAAAAAAAAACACACACAGAAGAGTGAAAAT ......:.:x:.:.x.:...x.-----------.x..:...:.....---------------............................x:x..x....:xx..... 22M11I14M15D46M 64/82 78.0% 93/94230402 0.0% 26/82 31.7% 59679278 NA +5138 chr4 + 190214555 75122362 75122361 75122584 223 AAGGAGAGAAACAGGGGAGGAAGGAAGGAAAGAAGGAAGGAATGAAAGAAGGAAGGAAGGAGAGGGGAGAGGGAGGGAGGGAGAGAGGGAAGGAGAGA----GGGAAGGAAACAGGGGAGAGAGGGAGGGAAGGAAGGATGGGAGAGAGAGAAAGGAAGAGAAAGAAAAAGAAGAAAGTAAGAGA-------------GAAAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGA chr4 - 94230402 32944086 32944085 32944317 61286086 61286085 61286317 232 AAGGACAGAACCAGAAGAGGAGAGAGTGGGAGATGGGAGGAAAGACAGAAAAGAACAGACAACTGGAGGAGGCAGAGAGGAGGAAGATGTTACAGAGAACTGGGCAATGAAATAAGGGGTTTAGCAAAGGACTAAAGGA--------ATAGAATGGCTGTGGAAGAGAGTGAGAAGAGTAAGAAATGATTCTTAGGTTTAAAAAAAAAAAAAAAAAGAAATGACTTGAAGAAAATAAGGA .....x....x...::.....::..:x.::...x..:.....x..x....:::.:x.::x.:xx..::....x..:....::..:::x.xx:x.....----..x..x....:.:...:xxx..x:.:...xx:.....--------.x....x..xx.x.:....:.:x..::.:.......:.-------------x...:...:..:...:..::.:x..xxx:......:x..... 98M4I37M8D38M13I42M 134/215 62.3% 232/94230402 0.0% 25/215 11.6% 42178276 NA +3632 chr4 + 190214555 75122509 75122508 75122635 127 AAAGGAAGAGAAAGAAAAAGAAGAAAGTAAGAGAGAAAGAAAGAAGAAAGAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAA-AGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .::.:......x.x...x.xx....::...-...:..x:.:.....:...x..x...x.........x.:.x....::x:....::.:.x.:...xxx:x.:::..::.x:x:x....:...x.... 30M1D96M 79/126 62.7% 126/94230402 0.0% 1/126 0.8% 29767097 NA +3186 chr4 + 190214555 75122558 75122557 75122656 99 GAAAGAGAGAAAGAAAGAAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAAGAAAGAAATAGA chr4 - 94230402 63699093 63699092 63699191 30531212 30531211 30531310 99 GAAAGAAAGGAAGGAAAAAAGATAGAGGGGACAATAACAGCAGTAAAATCCATGGTAAAAAAATGGGACGAGAAATTACAAGAGAAAGAGAGAAATAGA ......:..:...:..:....:x..:::..:x..x.:x::x..x:.:.xxx.x..x::..::.x..:.x....x.xx.x..........:......... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 11423465 NA +3353 chr4 + 190214555 75122587 75122586 75122682 96 GGAAAGAGAGAAAGAGAGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAAAAAGAGAAAGAAAGAAATAGAGAAAGAAAGAATAAGAAGAAGGAGGG chr4 - 94230402 67772343 67772342 67772438 26457965 26457964 26458060 96 GAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAAAAAGAATGGGAAACAGTAGAG .:....:.x...x..:.....:.:x...:..x:::.x.:.:::.:.:.:x.:..:::.:..:...x.::..:..:.......::...:x..x..:. 96M 57/96 59.4% 96/94230402 0.0% 0/96 0.0% 7350244 NA +3442 chr4 + 190214555 75122627 75122626 75122757 131 GAGACAGAAAAAGAGAAAGAAAGAAATAGAGAAAGAAAGAATAAGAAGAAGGAGGGAGAGGA---GGAGGGAGGGAAGGAAGGAAGGAAGGAGAAGAGAGGAAAGAAAGAGACAAAGAGAAAGAAAGAAAGGAA chr4 - 94230402 40465769 40465768 40465897 53764506 53764505 53764634 129 GAGTCTGGAGAAGGGATGACAAGAATGAGAAAAGGTAG-----AGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAA ...x.x.:.:...:..x::x.....xx...:..:.x.:-----.....x.:.:..:.:x..:---............:..:.:.....::.:.:.:.:..x....xxx..:..x..:xx...:x..x.x.::.. 38M5D19M3I69M 80/126 63.5% 129/94230402 0.0% 8/126 6.3% 34656858 NA +3963 chr4 + 190214555 75122777 75122776 75122919 143 AAGAATAAGAAGAAGGAGGGAGAGGAAGAAGGAAGGAAGGAAGAGAAAGGAAAGGGA--GAGACAAAGAAAGAGAAGGAGGAAGAGGAGGAGGAAGGAGGAAGGAATGAAGGGGAAGAGAGGAAAGAAAGAGAAAAAAGAAAGAA chr4 - 94230402 11253628 11253627 11253772 82976631 82976630 82976775 145 AGGGGTGAGAAGGTGATTTAATATGAAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA .:.::.:.....:x.:xxx:.x.x.......:..x.........:x..x:..:....--x.....:.:....::......::..::...:x.::..xx:x.x::..x.x..:x.:.:.::x:::.....x.:..:.x...x.... 57M2I86M 86/143 60.1% 145/94230402 0.0% 2/143 1.4% 63869149 NA +3100 chr4 + 190214555 75174829 75174828 75174907 79 TATCTCACTATATATATATCTCACTATATATATATATATATATACATATATATATATATATATATATATATATATATAT chr4 - 94230402 48167028 48167027 48167104 46063299 46063298 46063375 77 TATTGCACCTTGTATATATT--GCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT ...:x...:x.:.......:--:.:......:......x.:......:x.:..:.::x:...:.:..:..:.:..:... 20M2D57M 52/77 67.5% 77/94230402 0.0% 2/77 2.6% 27007801 NA +3203 chr4 + 190214555 75174879 75174878 75174930 52 TATATATATATATATATATATATATATATATGGCTAATTTTTTTGTATTTTT chr4 - 94230402 19559296 19559295 19559347 74671056 74671055 74671107 52 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt .:.:.:.:.:.:.:................::..........x.:....:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 55615583 NA +3173 chr4 + 190214555 75322462 75322461 75322520 59 AAAAAAAAAAAAAGAAAGAAAGAAAGAAAATAAAATTTTTTAAAGAAAAAATATTATAG chr4 - 94230402 48812285 48812284 48812343 45418060 45418059 45418118 59 AAAAAAAAAAAGTGAAAGAAAAAAACATAACATATTTCATTAAAAACAAAATATTACAG ...........:x........:...x.x..:.x.x..:x.....:.x.........:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 26510177 NA +3514 chr4 + 190214555 75343804 75343803 75343874 71 CTGCAACCTCTGCCTCCTAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACGGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx:x..:..:........x.x...x.xx.x........::.................:x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 57146678 NA +3393 chr4 + 190214555 75451334 75451333 75451511 178 ATATATACACATATACATATATACACAAACATATACACACAAACATATATACACACGTGTGTGTATATGTGTATATACATACATATATATAT-------ATATATATATATAAACTATTTTTAAAAGCAAGGC----------------AAACACAAAATTTAGGACAGCT--ATTATTTCCAAAGGCAAGCAGGGGAACAGG chr4 - 94230402 4417343 4417342 4417537 89812866 89812865 89813060 195 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACT--------GAGCAATGCTTCATGCCTGTGTACAACACACAGAAATCTTGACAGCTTGATTACCAGTATAAGAAATCAACTGAACAGG ..x..x...:.......:.:.:......:x.:....:..::::x:.x.::...::::.xx:x.:..x.:x:....:.....:x...x.....-------.:.:xx.:.........--------:.....x..----------------.x.....:..x.:xx.......--....::xx:.x.:.x..x..:xx....... 92M7I17M8D9M16I22M2I30M 109/170 64.1% 195/94230402 0.0% 33/170 19.4% 71033991 NA +3621 chr4 + 190214555 75451341 75451340 75451447 107 CACATATACATATATACACAAACATATACACACAAACATATATACACACGTGTGTGTATATGTGTATATAC--ATACATATATATAT----------ATATATATATATAAACTATTTT chr4 - 94230402 73121100 73121099 73121218 21109185 21109184 21109303 119 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTT .:::.::.:::....x..:.x...........x..:...:x:....:....:.:x...:.:.x......::--:........x...:----------.:.:.:..:.....:.x.x... 71M2I14M10I22M 72/107 67.3% 119/94230402 0.0% 12/107 11.2% 2330241 NA +9767 chr4 + 190214555 75490576 75490575 75490748 173 CTCACATCCACAGTCATGTTCTGATATTCTGATGGCATAGGAGTCTGTGCTACTTCATCATCCAGCTGTCTCCAATACCTGGTCATATCTAAAGCAGAGTGCATACATAATGGACATCTGTAGCCTCTG--AAAGAGATAGAAAGGTTATTTTCCAAATATTAAACAAGAATATA chr4 - 94230402 58485479 58485478 58485653 35744750 35744749 35744924 175 CTTACCTCCACCATCATGTTCTGATACTCGGAGGGCATAGGAGTTTGTGCTACTTCATCATCCAGCTGACGCCAGTACCTTCTCATATCTAAAGCAGAGTGCATGCACAAAGGACACCTGTAGCCTCTGGCAAAAAGGGGAAATAGTCGTATTCAGAAAATGGAGTAGGACCACA ..:..x.....x:.............:..x..x...........:.......................x.x...:.....xx......................:..:..x.....:............--...:..:x::..x:..::.x...x:..x..x:.::.:..x:.:. 129M2I44M 135/173 78.0% 175/94230402 0.0% 2/173 1.2% 17005097 NA +3784 chr4 + 190214555 75491601 75491600 75491679 79 AAACACTCACTCTTTCAACATTTCTTCATAACACGTTCT-GAAAGAAAATATAAGATTATTTTAGTAAAACAAAAACTGT chr4 - 94230402 58485863 58485862 58485938 35744465 35744464 35744540 76 AACTACTTACTCTTTTAACATCTCTTCATAGCACGTGCTGGAAAGAAAACACAAGA--AGTTCAGTAAG--AAGAACTGT ..x:...:.......:.....:........:.....x..-.........:.:....--.x..:.....:--..:...... 39M1I16M2D11M2D9M 62/75 82.7% 76/94230402 0.0% 5/75 6.7% 17005738 NA +6794 chr4 + 190214555 75491717 75491716 75491957 241 ACTTTACCTATGTAAAAGATGTCCACATGGCAAGACATGAGCAACAACACGGGATGTGTGAATGTCCTGTAAATGAAATAAATGTTAGTGCTTGTATGAAGACAATATAAACATCCAAGTATTTTAAATTCAAGAGCTGAG----------------ACTTCCAAAGTAAAAAATATTTTAAGCCTACCTCCAAACATATTGGACAATTCTGTCGGGACACATTTTCAATACACTGTTTA-----AAAGAGAAATTCACATT chr4 - 94230402 58487519 58487518 58487770 35742633 35742632 35742884 252 ACTTTACTTGTGAAGAAGGTGACCGCACGGCAGAACGCGAGCTTCAACACGGGACGTGTGAATGTCCTGT-TTTGAGACAAGTATCA--GACAAAAGAAAGGAAACATTAAGTTCCAA------CAGAGCCCACAACACAGCTCCCAGCCCAACACAGCTCCCAGAGCCGAAAGCAAAGT-AGCTCACCTCCAAGCATATGGGACAATCCTGCCTGGAGACATTTTCGATGCACTTTGCAAAGACAAAGACAAAGTTACACT .......:.:..x.:...:..x..:..:....::..::....xx..........:...............-xx...:.:..:.:.:.--.x:x:x.x:...:x..:..x..xx.....------:.:.x:.x.x.:.xx..----------------:..:...:..:x:...::.xxx.-...::........:.....x.......:...:.x...x........:..:....x.x:.-----.....x...x.:...:. 70M1D16M2D29M6D17M16I23M1D59M5I17M 159/231 68.8% 252/94230402 0.0% 31/231 13.4% 17004198 NA +3326 chr4 + 190214555 75549653 75549652 75549734 82 CTGTAGCCTCGACCTCCCAGGCTCAAGTGATCCTTCCACCTCAGCCTCCCAAGTAGCTGGAACTACAGGTATGGGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..::....:x:.x..:.::..:.......x.:.x:xx:x........::..................x..:-----...... 71M5D6M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 57352527 NA +3335 chr4 + 190214555 75563365 75563364 75563450 86 TACATATGGGTACATATAAATGTGTGTATGTGTATAAACATATGTATGTACATATATATCTGTTTATATACAAATTATATATGTGT chr4 - 94230402 4481679 4481678 4481764 89748639 89748638 89748724 86 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTAT .::..:..xx.x......::............:.:.......:::..x:.....:x:xxx::.x...:....x.....x..x..:. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 71081686 NA +3082 chr4 + 190214555 75602149 75602148 75602198 50 TGCCCTACATTTTGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTT chr4 - 94230402 60385934 60385933 60385983 33844420 33844419 33844469 50 TGATTTATATATTGTTGTTTTTTTGTTGTTGTTTTTTGCTTTTTTTTTTT ..x::..:..x.....x................x....:..x........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 15216215 NA +3006 chr4 + 190214555 75602161 75602160 75602202 42 TGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTTGACA chr4 - 94230402 87809159 87809158 87809200 6421203 6421202 6421244 42 TGCTGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTATTTCATA ..:.x.............................x...x.:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -12206998 -82023404 +3043 chr4 + 190214555 75602161 75602160 75602195 35 TGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTT chr4 - 94230402 72014470 72014469 72014504 22215899 22215898 22215933 35 TGTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTT .........x......................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 3587691 NA +3190 chr4 + 190214555 75602162 75602161 75602233 72 GTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTTGACATGGAGTCTCGCTCT-GTTGCCCAGGCTGGAGT chr4 - 94230402 39858688 39858687 39858759 54371644 54371643 54371715 72 GTTGTTTTTTTGTTGTTGTTGTTTGTTTG-TTTTTTGGACAATGACTGTTACTTTGGCTGCCTATGCCAAAAT ...x.........................-......x....xx..x.x.::..:.-.:....:.x..:::.:. 29M1D25M1I17M 55/71 77.5% 72/94230402 0.0% 2/71 2.8% 35743474 NA +3315 chr4 + 190214555 75602162 75602161 75602202 41 GTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTTTGACA chr4 - 94230402 37883991 37883990 37884031 56346372 56346371 56346412 41 GTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTCCCAACA ..................................::::... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 37718171 NA +3250 chr4 + 190214555 75609605 75609604 75609681 77 AAATATATATATAAAAAATATTATATAGATATATATCA--TATATGATATATTATATATATAATATATATATATTTAAA chr4 - 94230402 59342381 59342380 59342459 34887944 34887943 34888022 79 AAAGGGATATACAGAGATTATCATATAGATGTATATCACCTAGGTGAAAAAATACATATATAATAGATGTATTCATAAA ...x:x.....:.:.:.x...:........:.......--..x:...x.x.x..:..........x..:...x:x.... 38M2I39M 57/77 74.0% 79/94230402 0.0% 2/77 2.6% 16267224 NA +3019 chr4 + 190214555 75622717 75622716 75622769 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAACAGACAAGAAGACCAAGAAACAAAA chr4 - 94230402 25339712 25339711 25339764 68890639 68890638 68890691 53 AAAAGAAAAAAAAAAAAAAAGCAATTCATAGAAAATGAGACCAGGAAACAAAA ....:...............:x..xxx.:...x..x:......:......... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 50283005 NA +3001 chr4 + 190214555 75627674 75627673 75627749 76 ACATAACAAATTAACACAGAGCATCTTTCATAAAATATTTTTCTTTACTTTTTTTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 50001474 50001473 50001549 44228854 44228853 44228929 76 ACATCACAGAAGAAAAAAAAGCATCTTTTTTACATACTTTTTCTTTTCCCTTTTTTTTTTTTCCTTCCTATCTTCT ....x...:.xx..x.x.:.........:x..x.xxx.........x.::.......:....::..::.x.:..:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 25626200 NA +3056 chr4 + 190214555 75627675 75627674 75627754 80 CATAACAAATTAACACAGAGCATCTTTCATAAAATATTTTTCTTTACTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTGAA chr4 - 94230402 88358279 88358278 88358358 5872045 5872044 5872124 80 CAAAATGAAAAAGGATAAAACATTGATTTTTATATATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCTGGA ..x..::..xx.:x.:.:.:...:xx.:x.x.x........:.:x..:..xx..:....................:..:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% -12730604 -81499798 +101131 chr4 + 190214555 75642767 75642766 75645751 2985 AATTAGGGACATAGATAAATGCTGCAGACATCAGTAGTTTATTGTT-TGTTTAGTCCAAACACATTCAATATGGAAACTCAAAGAATACTTTCCACCTGAAACAATTAAACTAGATTCTACTAGCATATAATGCTTAACACATTACAGCAATAAAGATGGTAATCCATTGTCTTCTATACCTACTAAAGCCAAGATGGTAAAGCCAATTTGGTTGCAATAGTGTCATAAGGATAGAATATTACCATCAAAAAATAAAACAAAATCAGCAAATAACAGTAATGGTAGATGAATATTTTTACTCTGTT-------------TCACTGAAAAGAGGACAAAATG--TTAAAACTCCACAGTACTGCAGGTGAACAATCACCATGTAAACTTCTCCATATGATGTTTTAATGTTTTATTCATGGTATGTA---AAGACTGAAGCT--------GAATGGCTCTTTGCTCTACTTTTCTATTATTACACTTAACATT--------TGTCATTACTTTTGGTGCCAGAACAGTTTTCATGGATGGCAGGGCAATATCCTGAATTGGAAATTATATATATATATATATATATGGAAACAGAAATACAAGAAAATATGCTTGGGGGAAAAAAAACATTGACAATAAAACA--------------ACTGCTTCTTTAAA--AGTAGTATTAATAAAGGCTTCAAAACTCCAAAGTAATTTTCTGGTAAGAATTTCAAGTACTATAT--------CAGAAAGTATAAAACTGTTTCAAACAGAAAAAAAAAAAATCCTTAAGCCCCCCAAAAATGGAAACTATGAAAATCTGTGTCCCCAAAATATATGC-------AATAGTGCAAGACTTTCCCTCAAACATGGAAGACCTCATTCAAAGGGGGAAAAAGGGACAGATTTTACT-CATATTGCCCAGTACATGAAAAACAAAATACATGCATCATTTGCTAGTTTACT---AAATAGCAAACAGTTGCATAATTCAGAACCAATTTGCTACTATGTCAAGTGCATATCTTGTCTGTTTT--ACAAAGATAGAA---TGGAGAAGTCTTCCATGCTAACGAGCAGCTTTAAGTGGTCACACT---------------------TATTTACCCCACTCCTGC-CTGAAACATCAGAAACTGGTATGTACTGACTGCTCCAAGCATAAAATTGGATAAGCTTTGCCATACT------TGTGGTTTACTGGAACTTGCTATAAAGACAGACAATAATCCAGCAGCTACAAACTTTGCTCACAGAATTGTTTAAAGATTCATGTAAAAATAAAA-----GATGTCG---TCCCAGACTTAAATTCAGGAGCCACTCGGGTGCTGACATCAGTTCAAGAAT-TGTGCAAAATGAAT------GACAGTTCCCTGCCCCCCAAATAGAAAATGCAAACACTTAAAGAGCTGCTGTTCTTTTCTCCGAAAATTGCAGTATCCTCACTT-CAGGCTTACTTGCCATTTATAG--------AATCTGACTGCTTTTAAAATGTCACTAAAAATGTACGTCAAGTTGA-CTGACTTTTCCAA-GCCCTGAAGTGATAT------GTTTC----AACGTCCACATTCAGGCTAAGAGAAAAGTCAAC-TAGAGGCTTACTCAAATAACTGACTTCCTCCTTCCCTCTCCCCACAAACACACAGGACTCCCTCCCTCCCACAGAGAACACAAAGTTGTTAACTGAAGAACAAGATAAATAATATGCTAGTCCAT-TTTACTGATTTTAAAGATACTGCAATTTTTA-TACATTT-----CGATGATTTTTCAACATT--TTGCAGCTGTTTGGCTTTGCAGCACAGCAATTCATACACTATACTGTACAAAATTACCAGCAAGACTGGAATGATGTATTAATAGAAGGCACCATCATGCTTATTACATTACCAGAGAACAAAAATACAGTAAAGACAATTTTCACTGTACACAGCTTAAAGAAAGGAAAAAAGGGGAGGAGGAGTGTGTTGAGCAGCCAGCCATCCCTGTACTGAAGAGGGGCAGGTAGAAAAATCTTAGATATGGAGCTACTAAATCTGGTCTAATAGTCAAGACCATCGCATTTGAAGTTCTAATTTTTATTATTTAGTTCATAACTAAAATGATTTCCTTCTGGAATATACTTGTAGTCTTGTTAAGGTTTATGTGTA--CACACGCTGGTCACAGCAAGCAGATAAAATGCCCTCATCATTTCACAAACTATTTTCTACTGGAAAAGA---AGATGAGATTTTTTCC-CTGTTGCCTCCTGTTGCAGATGTCAATGTTAATGAGTTCAGAGTACCCATTAGTACATTTTGATGAGTGCATAA-CAAGTTTCTGTTGG----TTTGTATTTTTGGGGGGAGC---------CAAGAAAAAAGGCAAGATTCTCCAATTGCACAAATTGCACTATTTGTGTTCCCAGCATTAACAGGCAGAAACAGTAACACTTAAACAAAATGTGCAGCAGAAGATTTTTTTTTTACTCAAAGGACCTGAATTC-AGTGGGCATGTCCTTTTAAGTTCACTTT-GTCGTAGATAGTTTAAGATATGGTCATTTCT---------------------CAGTCCTTAATTCTCCAAGTCTAGATTTATAAATTAACAATGTGAATCCTGTTGTGAAATTGGGGAAATAATGTCCACCTCAATTTAA-CTGATAACCAAAGATGCTTTTCACATCAAAGAAATGATCAAAAAGGCTGTGTCACATTCCAAAGCCAAAAAAAAAATTAACAAGAATGCAAACACGATGAATAATGTACCACTGCCAAGAC--TTTGCCAACAGTGGAGCTTCAGCGACGCTGTCCTGTGAAGCGGCCCTCCATTTGCCCGGTTCCTCTTCCAGAGCCAAGTTTCTGTGCCATGCCACCCCTTGGAGGAGGTCCTCTTCCATCACGATCACGCATCATTCCACCACCCACAATTCCACGTGGACCACCGGGACCTCGATCATTGCGCCTAATATCCCTGCGATCATCACCACCACCTCTGGTTTCTCGCTCTCTTGCAGCTCTTGTTTTTTTCTCTTCCACATTTAAACGTACTTCCCCTCGAAACATAATCGGCTTTATAAAAGAGAAGAAAAATATTTACATGGGCAGGTTAGACAGCAAT chr4 - 94230402 47954373 47954372 47957347 46273056 46273055 46276030 2975 AACTCGGGACATGGGTCAATGCTGCAGACATCAGTAGTTTATTGGTATGTTCAGTCAAAACACATTCAGAATGGAAACTTAAA-AATACTTCCCACCTGCAACAATTAAACTAGAATCTACGAGCATATAATGCTTGACACATTACAGCAAGAAGGATGGTAATCCACTGT--TGTAGAACTA-TGAAGCCAGAATGGTCA-GCCAAGTTGGTCAAAATAGAACCGTAATGACAAAACACACCCACTACCCAC-------AAACCAGCAACAAACAGCAATGGTCAGCAAATCCCTTC-CTTTGCTCAACGAGGTACATTTACTAAAAGAGGGTCAAGAACACGTAAGAGTCCACAGAACAGC-GATGAACTGTCACCATGTAAACTTCTCCAGATGACGTTCCAAT-CATTGCTCATGTCATTTACACAGGAATCAAGCCAGAAAATGGAATGGCTCTTAATACTCCTTTT-TGTTGTCGTTGTTCAGATTATCCCCAGTGCCATT--------TGCCATAAAAATGA-AATGGGTGGCAGCAAAACACC-----------ATCGCAC---------CACaaaaggaaaaagaaaaaaaaaaaaa---------gaaaaaaaaaaTCCCTACA-TAAAACACACAGCATTGAGAAACTGCTAACTGAAGGCAGCAATCTGTCCAAAGGCTTTGAA-CACAAGTAGAGCTGTGTGCTGAGCAGTTCAAGTACTACAGGTTTCCAGCTGAACATGTCAAAGACTTTCAATGAAAAACTGAAATA--------------CAAAAAAAAGAGACAAGAAGAAACGTGCCTCAGAAAAAAATGTTTATGAACATAGTGCAAGACTTACCATCATGCACAGAAGACCCTGGGTCTGGGAGAAAA------CAGATGCCACTTCACTTTGCCTGATGTA---GAAGTAAAATATGTGCAAAATCTCCCAGATAACTCGAAAACAGCAAGGGAATGCATAATCCGGGGACAGACTAATGCTAT-----------ATCCTGTCTGCTTTTGCTTCAGATTGCTGTTTTTTGAGGTCTTCCATGTTTATAAGCAGCTTTAAGTGGTCACGCTGTCACACAGACTCACATCAAACACACACCCCTCTTTCACTCTGACGCACCGGAGCCTCGTGCTCACTGCCTGCCCCA-GCAC---------TGAGCCCAAACACACTGCCTGCTGTAGCTGATGGGAACGTGCTC------CGGAATGCCATCCAGAA---ACAGACCTCTCAACCTGGA------AAACTCGCACTTGAAACTGAAGACAACGACGTCTCTTTCCTATCCTTTAGTCCCG-AGCCAC---AGTGGCAACTTCAGCTGAGAGATATGTGCAAAATGAGTTTTAAAAAGAG----------CGCAAATGGAAAACGCAAATACTCAA-GAGCTGCTGTGTTGTTCTCTGAAAATTGCAGTATCCGTATTGATATGCTCACCGG-----TACAGGGACACTCAGTTCTACTGATCATGAGCTG--GCCAAAAGCGTTCATCATTCCAAACTGGCTTCCGAAACGTCCCAGAAAGATCTCACTCCGTTTTCCTGAAGTTTGACATTGAT-TAAAGAGAAGAGACAACCTGGAGACT------ATTAGATGCCTTCTTCCTCCCTTCCCCCC--------------------CGCTGCAAAAGAACAGACAAACTTGTTAATTGAAGAGCAAGGTGGATGGTAATTTCAGCAATGTTTACTGATTG-ACAGATACTGCAATTTTTAATACATTTTTTTTCCATGATTTTTTCAGATGCGTTGCAGCCGATTGGCTTTGCAGGACAGTAGTTCATACACTACACTGTACAAAATCACCAGCGAGACTGGAATGATGTATTCATAGAAGGCACCATCATGCTTGTTACATTACCAGAGAACTCAAATACAGTCAAGACAATTTTCACCGTACAATGCTTATCGAAGGGGAGAG-GGGAAGGAGGAGTGTGTTGAGCAGCCA----TCCCTGTA-TGAAGAGGGGCAGATAGAAAAATCTGACGT---GAGCTATCAAA-CTCATTAAGTACTCAGGACTACGGC-TTCGGAACTCTAGGTTCTGTT---TAGTTAACGGCTAAA-TGGATTCCTTCTGGAATGAACTCATAGTCTTGTTAAGGTTTGTGTGTGTGCATATGTTGGTCACAGCAAGCAGGTTGGATGCCCGCACCGTTTCACAAGCTATTCTGT-CTGAGTAAGAGAAAGAAGGGTTTTTTTCCTCCGATGCCTCCTG---CAGATGTCAATAC--ACGAGTTCAGAGTACCCAGTAGTGCATTCTGATGAGTGCGTAAACAAGAGTTTGTTTGGAGCCAAGTGTTCTAAAAAAAACCGAAACCAAACAAAAAAAAAGGCAAGCTTCTCCGATTGCACAAATTGCACTATTTGTGTTTCCAACAGTAACAGGCAGAAACAGTAACACTTACACAAAATGTGCAGCAGAGGGCTTTG-----ACTGTAAGGACCTGAATTTTATTGGGCATGTCCTTC--AGTTCACTTTTGTTGCAGACAGTTTACTGTTTTGTTGtttttttttttttttttaaatCTTTCCAGTCCTCAATTCTCCAAGTCAACATTTATAAATTAACAGTGTGACTTCTGTTGTGAAACTGGGGAAAGAACGTCCACTTTAATTTAAACCGGAAACCAAAGGATGCTTTCACATCAAAGAAATGATCAGAAGGGCGGTGTCACATTCCAAAGCCAAAAGAAA--TGAACAAGAATGCAAACACGATGGATGATGTACCACTGCCAGGACCGTCTGCCTGCGGTGGAG-TTCAGCGACGCTGTCCCGTGAAGCGCCCTTCCATCTGCCCGCTGCCTCGTCCAGAGCCGAGCTTCTGCGCCATGCCACCTCTTGGAGGGGGTCCTCGGCCGTCACGGTCGCGCATCATGCCACCACCCACTATTCCACGGGGACCCCCGGGGCCTCTATCATTGCGCCGAATATCCCTACGGTCATCACCTCCGCCTCGGGTCTCTCTCTCACGAGCAGCTCTTGTTTTTTTCTCTTCTACGTTCAAGCGCACCTCACCCCGGAACATAATGGGCTT--------ACAGGGAAAATATTCA-AGGCACACATTAGTCACCAGT ..:.x.......:.:.x...........................x.-....:....x...........:x.........:...-.......:.......x...............x.....x..............:..............x..:............:...--.x..x.x...-.:......::.....x.-.....x.....::x.....x::.:...x..:.:..:.:xx...::.xxx.x-------...:......xx.....:......x::::...x::..:-..:..:.-------------.:...:...:::..x...:.xx--x...:.x.......x..x..-.:.....x:....................x....:...::...-:x..::.....x:..x..---.:..x.x....:--------...........x::x..x.....-.:..:.:::xx..x.x...--------..:....--------.....x..x.:.xx-x....:......x:x..:.:.-----------..:::.:---------:.:.x.x.....x.....x.x..:....---------.::........:x::x...-.......--------------......xx:.x..:--..:.:.x.xxx:........::..-.x.x.:x:x.::.x.x..x.:..x.x...........:.x--------.x...x:.:.x...xxx......xx.:...xx:...x.--------------......x:::.:x:.x...:.xx:...:.:.x:...x.x...:-------x..............x..x...x:..::.......:::xx:xx:..:.:...------.....x::...-..:x.....:::.::.---:..::......::....xx..:.x.:..x.x...---...:.....:x::x........:.:.::x..:x:.:x.:....-----------...:......:...--x:xx....x.xx---.xxx..:..........:.x.::...................:..---------------------:.:x:.....x..::::.-....x:..:.:..:x..x..::x:....x....:...-...:---------.:...::x:x..:...------...:.:.x.:x.....x....x------.:..xx::x......x.---...:..:.:x.xxx.x.:.------...xx:x..:x.:...x.:..:-----..:...x---...:.xx...x.:.:.x.-......---:...x::..x....:.x.:::..-............:.------:.x..----------.x.....:.....:.....:...:..-..........x:.x.....:................x:.:.x-:.x...:..:x.-----..:..--------.:.::x....x.:x.:.:x..--:.:....::..x.:...xx:::.-...:...::xx..-.:..:::.:x...x.------....:----..xx.:x.....x.x-:x.......:..x....-.:...:..------.x..:x..x....:....:..:..:....--------------------.x..x.x.x...:x.x.....x.......:......:....:.::..::..xx:.x:x.x..-..........x-.x.................-.......-----.x.........:x.x..x--.......:.x............x....:.:...........:............:......:..................x.....................:.................xx.........x..............:.....xx.....xx...:..:.:.:-...:.......................----........-.............:...........x.x:.---......::...-..x:.:x.:..x...:...:.:x..-..:.:.::....:x..:.:..---.....x.:::.....-..:x.............:x...::.................:.....:--..:.:.:................:.x::......x..:.:........:.....:.x.-...::x....---...x.:.x........-.:.x.........---...........::--.:................x....:....:..........:...-....xx.:....x.----:xx..:..:.x::::::.x.---------...:............x......:..........................:...:..x.........................x.................:.::...x-----...xx.............:-.x.............:--..........-..:.:...:......xx:.x.x..::...:.---------------------.......:.............x.x...............:.....x.:...........:........x..:......:.:.......-.:.:x........:xxx:......................:..:...x......................:...--.x.....................:..:..............:...--.:....x:.:......-................:........x..:.....:......x.x....x.........:..:.....:...........:........:.......xx..:.....:..:........x...........x........x.....x.....:....x...........x.........:..:........x..:....x...:....x...x.xx.......................:..:..:..:..:..:..x..:..:........x.....--------.x.:.:........:.-.x.x:..x:....x..x..:. 46M1I36M1D87M2D10M1D17M1D51M7D38M1D7M13I22M2I20M1D43M1D18M3I12M8I23M1D19M8I7M8D14M1D21M11D7M9D28M9D19M1D7M14I14M2I24M1D40M8I38M14D43M7I52M6D11M1I16M3D34M3I43M11D14M2I12M3I45M21I18M1I37M1D4M9D16M6I22M6D17M3D19M6D22M5I7M3I18M1D6M3D23M1I14M6I5M10D26M1D42M1I12M5D5M8I21M2D23M1I13M1I15M6I5M4I15M1D17M1I8M6D29M20D62M1I11M1D19M1I7M5I18M2I172M1D27M4D8M1D30M3D11M1D25M1D21M3D15M1D48M2I58M1D10M3I16M1I13M3D13M2D43M1I14M4I20M9I109M5D19M1I16M2D10M1I31M21I88M1I74M2D45M2I16M1D277M8D16M1D21M 2096/2780 75.4% 2975/94230402 0.0% 400/2780 14.4% 27688394 NA +9216 chr4 + 190214555 75646332 75646331 75646464 133 ACTTACTTTTGCAATTAAGATTCTCTGAACTGGTTCAGAGTCATCAAAAACCACAAAACCAAAATTTGGAAGCTTTCCCCCAACACCCTTGGTATTGATGCGAAGTTCCACAACGTTTCCAAAACCTGTGAAA chr4 - 94230402 47958229 47958228 47958361 46272042 46272041 46272174 133 ACTTACTTTTGCAACCAAAATTCTCTGGACTGGCTCAGAATCATCAAATACCACAAAGCCGAAATTGGGCAGTTTTCCTCCAACTCCTTTTGTGTTGATGCGGAGTTCAACCACATTTCCAAAGCCTGTGAAA ..............::..:........:.....:.....:........x........:..:.....x..x..:.....:.....x..:..x..:........:.....x..x..:........:......... 133M 111/133 83.5% 133/94230402 0.0% 0/133 0.0% 27688103 NA +9093 chr4 + 190214555 75647023 75647022 75647182 160 ACTTACTCATGAAGAATTCCTTTAGCTCATTTTCATCAATATCATGTGGCAAGTTACCAACAAAAAGTTGATGACTATCTGGATAGCGAATTATTCTACGGTTGTCAGAGTCATTCTGTTCCATATCTCCTCTGCCT------GAGAATAGAAATAGAGCAGATAC chr4 - 94230402 47958513 47958512 47958677 46271726 46271725 46271890 165 ACTTACTCATGAAGAACTCTTTCAGTTCGCTCTCGTCGATGTCATGCGGCAGGTTCCCAACAAACAGCTGATGGCTGTCTGGGTAGCGGATTATTCGGCGATTGTCCGACTCATTCTGCTCCACATCCCCTCTCCCTATGTCAGGGGAAAGAAG-AAAGCAGAGAC ................:..:..:..:..::.:..:..:..:.....:....:...x........x..:.....:..:.....:.....:.......x:..:.....x..x........:....:...:.....x...------.:.:.x....:-.:......x.. 137M6I11M1D11M 125/159 78.6% 165/94230402 0.0% 7/159 4.4% 27688510 NA +3282 chr4 + 190214555 75648348 75648347 75648414 67 AAAAAAAAACAAACAAACAAAAAAAAAAAACAAAAAACCGTGACAATAACCAAATAAGACTTAAGTC chr4 - 94230402 24689313 24689312 24689379 69541024 69541023 69541090 67 AACAAAAAACAAACAAACAAAAACAAAAATCTAAAAACCAAAGAATCAGCTAGGTAAAACCAAAGTC ..x....................x.....x.x.......:x::x.x:.:.:.::...:..:x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 50959035 NA +8845 chr4 + 190214555 75648634 75648633 75648929 296 CTCACCTGGTCTTGGTCCTCTAGGAGGAAAACCAGGTCGTTCTCTAGGTCGTTGTTCACGCACACGAGGTGGCTGAGATTGAACTTCTGGTTTAGCTTCGACTCTTGGCTAAAATATAAAGAAAAAAAAACATTATAAAAAACACTCCACTGGAGAAAAA--CCAACCAAAGCACCTAACGACAAGTCACTAGCAGACATAACAGTAGTT-------------TTAAGTTTAGAATGTTTTTAACATAGTGTCCTATGTATGAGAAAAATAAATTTTTATC-----AAGATATTCTGTACCAATCTAGGACTGTAG chr4 - 94230402 47960320 47960319 47960628 46269775 46269774 46270083 309 CTGACCTGGTCGAGGTCCACGGGGTGGAAATCCTGGTCGTTCCCTTGGGCGCTGCTCACGCACGCGAGGAGGCTGAGATTGAGCTTCGGGTTTTGTTTCAACTCTTGGCTGAAACA-GGAGGAGGACAGCTATTATTCAGTACCGTCTATTAAAGAAAAGGCCCAGCAAAAACAA--AACCAAAAAGCAACACAAGACATA--GGTAAGTGGCATGCAGAAAATGAACTCTGGAAGATATACATCCAAGTA-AATATGTTTG-GAAATACATTTTTTCATCTCTGTAAGTTCCTCTGTACCAATCCAGGACTGCAG ..x........xx.....x.x:..x.....x..x........:..x..x..:..:........:.....x............:....x.....x.:...:..........:...:.-::..:.::.x.:x:.....xx.:x..xx..:.:.::......:--...:.x...:..x--...x.x..:x..x:.xx.......--:...:x.-------------.x..x.:.:...x:.x.x:.x.xx...:-xx.....x..-....x.:.xx....:...-----...x.x:............:.......:.. 116M1D43M2I13M2D24M2D7M13I28M1D10M1D18M5I30M 205/289 70.9% 309/94230402 0.0% 27/289 9.3% 27688314 NA +21362 chr4 + 190214555 75653840 75653839 75655254 1415 AAAGTGGGTGCACTGACATATAATACAAGTTTTTTGTATATTTAATCCATAATTTCTGATTGACTCATTTTTAAAAGTATTTTAAAAAT--AAGCAATTGGCAATGTAACAAGGATACAATCCAATGTGTTCACAGATTGGTTACCTGTGAGACTGGTGCTTTAACATGGGGTGGAATTCCAGAGGAAGAAACAGTACCACTAGGAGGCAGGTTTTTACTGGTCACTGAAGCCCAGGAGAAAGCCTGCAGGAAATGCAACAAACCTAGACTACTAATCATGGAAAACCACCAACATTCCTATAGGGAAACTT-----CCAAATATATATTTTCTTTTCATTTCTAAACTATTGCTCTATATTGGAAGACTCCTAAAAGAAAGGCACACACACACATGCCAGTC-TATGTGCCAGCTTTCAAAATCTCATTATGCAAGCTTATTTATAACTTTTGTCTGACTACTAAGTAAAACCATAAGCAAGTTCCTACGTACTCTAAGTAGATGAGCAAGTGGCAAACAAAAC----------CACTAACAAACATGCTAGAAAAACCTGAACCTAATAGAAACAATTTATTTCCCCTTTGGGGGTAAGATAGGGTGTGTGATG------GTGTTAACGGGAGAGGGA---AGGATAGGAAAGA----AGAGAGTATT-----AGCTGGAAACTCTGACAT-TCACAAATTGAACAAAGAATCTCCTCCTATCACCACTCAAATATACTTTAACCTT--TGACTTTGAAGAAAGATAAAAGAAGTTTCAGGTAGGCTTACATGATACACTAAGGATGTCACTC--ATCTTTCCAAGATAGTTTAATTGGTGTAGAAAGGAAACTGATCCCATTTAAACCACAAA--CAACAGGTATCTCTTCTTTTAATTATAGACCAACTTGTTTAAGTTGGGAAACTGCA-TGATTCCTGGTGCATCTGTGCTCAGAGAATTTAATACAGAATGAAAGAACAACTGACAGCTCTATACATGGATCCAAATAATTTCATATAAGTTACTAAACAATGCATACAGACAAGGATTCATCTTAAGTTATAAGTTTCAC-TCTTAGAGGGGTATTTTGCGGGGCAGGGAAACAATAACATTTTCTCAGGTAACAAACAAACCCCACAGCTTCTTTCATATACATAAAATAATTTA--CTAAACAATTTAACATAATAGAAAA----AGGTCATACTTCATTAACAGCACCAAATTTGAA-------------CATGTGATGTTGTAAGTCTAAAGAGTTCTTTGATCTAACCTTTGGTGGTTCTTGTGGCAGAGAAACAGGTTCTGCCGGAGGAGGAGTAGTAGATTTCTCCTCTAGTTCTTCTAAGTTCTTCTCCTCCACTTGTGGTTTCAGCTCTTCAGTCTTTGTTTCAGATTCTGGCTCAGGTTCAGGTTCATGAGAGGATTCTTCCAAAGGCTCCTCTATGCCATTACTACAATA chr4 - 94230402 47964067 47964066 47965412 46264991 46264990 46266336 1346 AAGGTGAATGCATTCACATTTAAGACAATTAATTTGTGCA--------ATAAAAGTCAAACAAATCAATCT----GTTAATTGAAAAACGGAAGCAGTTTGCA--GAAGTAATGAGACAATCCAAGGTGTTCACAGATGGGTTACCTGTGAGACCGGTGCTTTAACATGGGGCGGAATTCCAGAGGAGGAAACAGTACCACTAGGAGGCAGGTTTTTACTGGTCACTGAAGCCCAAGAGAAAGCCTGCAGGAAATGCAACAAACCTAGGCTACTCATCATGGCAAACCACTGACATTCCCACAGGGAAACTTGTCTGCTGAAAACATACTTTTGGTTCATAACT-GACTACTACTTAATGTTACAAAGATACAGCAGGATTTGCA-----GTTCAAGCCATTTGTAGACTCCAACAGTACAGAGCAGGGTGTGCAGCTCTCACTGCCACTACTG----------------------AAACAAG---CTGGGCTCGCTCAGCA----------TTCCCAACTCAATGCTTCCCTAGCACTGACAATCCTGC---AGTGCTCAGTGTCTTCTGCACACA-----------------GGAAGAGAGCGGATGCCAGAAGTTAGAAATAAAAACAGCAAAGAGAAACAGGATTGAAAAGATACGGGAGACTGATGTTGGAGCTAGAGA--ATGACCTCTCTCCAGCTG------TCATCCACTCCTCTCATCTCTTTCAGCTACCTCCAGGTTACTACATCAGATGACGCATGGCACTTTTTAAAATTAGGCAT-CCTGCT--TCTAAGGGAGACAATCAAAGCCTTCAGACTTATTTT--TTAACCTATACTG----TGGGTCATTTTCCAAGTGCCAATGCATCAGGGgtttgtttgtttgtttgt-------ttttttctttTAAAGGAAGAGCAGTGGTTCCCATTGCAT---------GAGTTTTTCAT------TGGTGGTAGTCTGGGTTGTTTTTTTAATATACCTTAACTACACATTTTAAAAGGTTAACACATGCATAAAACCACACACACACTTTACA----GAGCATTACATCTACAATACATAACTTGAACAGCATTGAAG-AATAACTTTTTCT--GGTGAC------ATTTCACAATTTTT------TAAGTTGAAGGTTTAAATCTAGACAGTTTCAGATACTGAAAAGTGTTTGGCCACTCAAAATGACTAAGATCAGATCCAAACCTTCTGGCTTACCATCTGCACTAAGAAGCACAGATATGTATTCTAACTGACCTTTGGTGGTTCCTGGGGTAGTGAAACAGGTTCTACAGGAGGTGGAGAAGGAGACTTCTCTTCCAGCTCCTCAAGAGCCTTTTCTTCTACCTCAGTCTTCAGCTCCTCAGGTTTTGTTTCCGATTCCAATTCTGGCTCAGGCTCATGAGATGATTCTTCCAGTGCCTCCTCTATACCATTGCTACAATA ..:...::....:.x....x...x....x.xx.....::.--------....xxx:::.x::.x...x.:.----:x..x..x.....:--.....:..x...--.x.::..x..x.........x............x...............:.................:..............:...............................................:................................:.....x.......x.......::.......:.:..........-----.::..x.:...:...:xx.....xx..-:....:.:..:x..:..:x..::x.x.x:x.:..xxx...-----::x..x....x.:-..x::x...:.xx.xx.:.x.xx:x.:....:x::.xx:.::x...x:..----------------------..:....---..:x.:x.x..x..:.----------.xx.x...xx..:----------....:....x.x...---.:x:x:.x.x::..xx.:x.x...-----------------..:x:...xx..:..:xx..x.------:.:xx...:.x.:..:..---.....x.:.....----:....x.:x.-----....:..:.--x....x.-..x.x.::..------xx...:x.....x...:.x..:xx.xx...:.:x.xx..--.:xx.:x..x..x:x..::x.xxxx..xx.:x.....x.-.x..x.--x......:x.x..x..--.x.:...x:.xx..x...--..:::x..x.xx.----:x.:..x:x..:x..x::.x..--..x....x:.:.x..:x...:x..:.-------:..x..:xxx.x::.:..xx...-..:....::x.....---------...xx...x..------..:x:.x.xxx:x.::x.:.:.x.xx..:x.:.:x..:x.:x:xx.x...:xx::...xxx.......x.:x..x:x.:x..::...x:----:..:x.:..-...xx:.x:x:..x:...x:x:...xx...:-......x......--...:..------.:::....::..:.------..x:.x:..x:x..x.--...:...:...x.x...x.::...:----x..:..:x.xxx..x.x:.:x.:..:..:::..-------------...x..xxx.x:x...:x:.:.x.xx.x..:x.x..:..............:..x..:..x............:.x.....x....x..x...:.....:..:..:..:..x.::x:...:..:..:..:.xx.x:........:....x:........x.....::::..x..:.....:........x..........:x.x.........:.....:........ 40M8D23M4D14M2I12M2D207M5I27M1D40M5D13M1I50M22D7M3D16M10D13M10I15M3D24M17D22M6I18M3I13M4I10M5I9M2D7M1I10M6D39M2I39M1D6M2D16M2I18M2D13M4D22M2I26M7D23M1I15M9D11M6D89M4D9M1I31M1D13M2D6M6D14M6D16M2I25M4I33M13I228M 833/1282 65.0% 1346/94230402 0.0% 197/1282 15.4% 27689773 NA +7878 chr4 + 190214555 75655753 75655752 75655874 122 AAATAGTATGCTTACGTCACAGGGTGAGCTTCATAGTAACCACTGTTAGCATTTTCTTGCACAGGTTCAGGAGATGGTTGTCTTTCTTCTTGTTCCTCTTCTACTTCATCTTCTGATTCTGA chr4 - 94230402 47966191 47966190 47966312 46264091 46264090 46264212 122 AAATGGCCTTCTTACGTGACAGGATGATTTTCATAGTAGGTACTGCTTGCATTTTCTTGCACAGGTTCAGGTGATGGTTGTCTTTCCTCCTGTTCTTCCTCCACCTCCTCTTCGGACTCTGA ....:.:x.x.......x.....:...x:.........:x:....:.x.......................x..............:..:.....:..:..:..:..x.....x..:..... 122M 99/122 81.1% 122/94230402 0.0% 0/122 0.0% 27689562 NA +6628 chr4 + 190214555 75656919 75656918 75657039 121 CTCACCTTCATCAAGTTCAGGCTCAGAATCACCAAACACTTCATCTTCATAACGAAACATATCATTGTGAACATAAAATTTATTTGGAACAGATCCCTATAGGA-AACAACATTTATTCCAT chr4 - 94230402 47967189 47967188 47967310 46263093 46263092 46263214 122 CTCACCTTCATCAAGTTCTCCTTCAGAATCCCCAAATACTTCATCTTCATATCTGAAGATATCGTTATGTACATAGAACTTGTTTGGAACAGACCCCTGCAAAAGAGCAACACACACTCTGT ..................xxx:........x.....:..............x.x:..x.....:..:..x.....:..:..:...........:....::.::.-.:.....:x:.:..::. 104M1I17M 93/121 76.9% 122/94230402 0.0% 1/121 0.8% 27689730 NA +10189 chr4 + 190214555 75657551 75657550 75657732 182 ACTTACTTCAGGAGCCAGAACAAAGGTTTGCATAAACTTTCTTTCTGGTTGTCCACTGTTAGACAGCAAACCCATGACCTGGACAACTACTCCATCACTCAAGGTTGCATGAGCATCCACATGACGAATTTTAGTATGACATTCACTGAAGTTCAGAGATAATACTTTGTGGTGTATATCCT chr4 - 94230402 47967407 47967406 47967588 46262815 46262814 46262996 182 ACTTACCTCTGGAGCAAGTACAAAGGTCTGCATGAACTTCCTCATGGGCTGCCCATTGTTGGACAGCTCCCCCATGACTTGCACCACCACCCCATCGCTCAGAGTGGCATGAGCATCCACATGGCGAATCTTGGTGTGGCACTCACTGAACTGCAATGACATCACCTTCTTGTGTATCTCCT ......:..x.....x..x........:.....:.....:..:x:x..:..:...:....:......xxx........:..x..x..:..:.....:....::..x.................:.....:..:..:..:..:........x.x..:x..:.x:..:..x.x......x.... 182M 138/182 75.8% 182/94230402 0.0% 0/182 0.0% 27690144 NA +7246 chr4 + 190214555 75658832 75658831 75658931 100 TTGATACTTACATTTTGGCCATAAACAGCTTCCTGGGGCTTTCCACTAGCATCTACTCCACCATGAACATAGGAAGAATTCCTGCCATAAAACCTGCAAA chr4 - 94230402 47968041 47968040 47968140 46262263 46262262 46262362 100 TTGATACGTACAGCTTGGCCATACACTGCTTCTTGTGGCTTTCCGCTAGCATCCAGTCCTCCATGGACATAAGAAGAATTCCTGCCATAAAACCTGCAAA .......x....x:.........x..x.....:..x........:........:.x...x.....:.....:............................ 100M 87/100 87.0% 100/94230402 0.0% 0/100 0.0% 27690791 NA +8370 chr4 + 190214555 75661916 75661915 75662052 137 TTGTTTAAAATTTACCTGTGTAAATATTCCGGAGCTTTATTCAGCAAAGTATAATATTGCCTCACAAACTCCCGCCCTACAAGCAGCGGACTGGGCTTCTCCATAACCATTTCTTTGCTGCACAATGTCAAATGCTG chr4 - 94230402 47971494 47971493 47971630 46258773 46258772 46258909 137 TTGTGTCAGTGTTACCTGTGCAGGAAGTCGGGAGCTTTATTGAGCAGAGTGTAGTACTGTCTGACGAACTCCCGCCCTACAAGCAGGGGACTGGGCTTCTCCATCACCATTTCTTTGGTACACAGGGTCGAAAGCTG ....x.x.:xx.........:.::x.x..x...........x....:...:..:..:..:..x..:....................x.................x............x.:....:x...:..x.... 137M 110/137 80.3% 137/94230402 0.0% 0/137 0.0% 27690422 NA +3008 chr4 + 190214555 75674680 75674679 75674735 56 TGCTATATGTATGTACATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681928 8681927 8681983 85548420 85548419 85548475 56 TGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..x....x:...:..:..:...::.:.:.:...:.....x:.:............. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 66992752 NA +3350 chr4 + 190214555 75674687 75674686 75674759 73 TGTATGTACATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTAAGATGGAGTCTCTCTGTG chr4 - 94230402 92735348 92735347 92735420 1494983 1494982 1495055 73 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTG ..:..:.x:....:...:..:.:...............:.x.........:.x.xxxx:x..:....:x.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% -17060661 -77169741 +3029 chr4 + 190214555 75674689 75674688 75674740 52 TATGTACATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x..:..:...:..:.:..........x....:.x.........:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% -17060663 -77169739 +3155 chr4 + 190214555 75678295 75678294 75678362 68 CTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGTGTGTGTGTACACAGGGTCTCATTATGTTG chr4 - 94230402 70982627 70982626 70982696 23247707 23247706 23247776 70 CTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTG .............:.......:::.:...x::.--:........::.::.....x....xx:.:..x... 33M2I35M 49/68 72.1% 70/94230402 0.0% 2/68 2.9% 4695668 NA +3022 chr4 + 190214555 75680973 75680972 75681034 62 TAAATAAAAAATTAAAAAAAAAAAAAGAAAAACCGTGGCCTAAGTCTTTCTCTTAAATATAG chr4 - 94230402 69534928 69534927 69534989 24695414 24695413 24695475 62 TAGATAGCAAATAAAAAAAAAAAAAAGAAAATTCATCATGTAAGTCTTTCTTTGATGTAAAG ..:...:x....x..................x:.:.x::x...........:.x.x:..x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 6146045 NA +3168 chr4 + 190214555 75694736 75694735 75694797 62 CTCGAAAAACAAACAAACAAACAAACAAACAAACAAAAAACCACTATGTCTTTATACCTTAC chr4 - 94230402 51198561 51198560 51198617 43031786 43031785 43031842 57 CTCCAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGG-----AAACCTTAC ...x.....x..x....x...:......................x.x.-----.x....... 48M5D9M 49/57 86.0% 57/94230402 0.0% 5/57 8.8% 24496175 NA +3012 chr4 + 190214555 75703962 75703961 75704031 70 AATTTTAGATCTTAAGCAAAATGCATAGTCCTCTGTAATGTCTATGAAAGGTTTTTTTTTTTTTCTTTTT chr4 - 94230402 41062676 41062675 41062745 53167658 53167657 53167727 70 AATTACATAGGTTACACGTAACTCATAATTCTCTGTATGTCTTGTGGAAGGTTTTTTTTTTTTTTTTTTT ....x:.x.xx...x:.:x..:x....:.:.......xxx::.:..:.................:..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 34641286 NA +3123 chr4 + 190214555 75703962 75703961 75704035 74 AATTTTAGATC-----TTAAGCAAAATGCATAGTCCTCTGTAATGTCTATGAAAGGTTTTTTTTTTTTTCTTTTTTTTT chr4 - 94230402 56332029 56332028 56332107 37898296 37898295 37898374 79 AATTTTAAATTGTTTACTTATTGAAACACCCACTCTTCTGTGAGGTCTTTGAAAGGTTTTTGTTTTTTTTTTTTCTATT .......:..:-----:.x.x::...::.x:.x..:.....:.x....x............x.......:....:.x.. 11M5I63M 54/74 73.0% 79/94230402 0.0% 5/74 6.8% 19371933 NA +3836 chr4 + 190214555 75710742 75710741 75710815 74 CTACATCCTCAAACTGCTAGGCTCAAGCAATCCTCCTGTCTCAGCCTCCCACGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....x..:x..:..x..:..:.....::x.:.x.xx.x........::..x...............x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 57513616 NA +5322 chr4 + 190214555 75724602 75724601 75724941 340 GCCACGT-AATGCCACGTCCCCGCGCATGCGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGGCTTAGAGGGCTGGAGTGGCCGCCGAGTTGGAGGCGGTGGTGGCAGCAGTAGGAGTGTGTAGAGTGCGGGATTGGGGCCCAGGCCCTGCGGAGGGCGGGGGAAGTTGTCTTCTTTTTTTTCCGGAGGGGCCGGTAAACCTGGTGGCTGAACGGCAAGATGAATTTCCTCCGCGGGGTAATGGGGGGTCAGAGTGCCGGACCCCAGCACACAGAAGCCGAGACGGTGAGAG----GAGCAGCGGGTCTGGGACTTGGGAAGGGGTCCGGGCAGGGACGGGGACG chr4 - 94230402 47979964 47979963 47980213 46250190 46250189 46250439 250 GCCACGTCGGCGCCACGTCGCGACGCACGCGCAG--TGGCCGCTTCCGGCG---------------------CGGGGGTGGCGGCGGGGCTGGGAGCGGTGAAG-------------------------------------CGGGGCCGGCGGTGTGCGGGG--------------------CCGGTGGG----------CGCGCAGCGGAACTGCCA--TGAACTTCCTGCGGGGCGTCATGGGGGGGCCCAGCGCCGGGCCGCAGCCCTCTGGCGCCGATACGGTGAGGGATACGGGAAGCGGG--CGGGGACGGGGATCGGGACCGGGCCTGG-CGGGGCCG .......-:::........x.x:....:.....x--........x.:....---------------------.x..:.....x..x.:.:...::......:x.-------------------------------------.:..x..x....x.x......--------------------....x...----------.xx.::..x....x..x.--....:.....x..x..x..x........x.xx..:.....:..x....x.x.x.:x.....x........:.----.:.x......--:...:x:x....xx...x......xx..-.....x.. 7M1I26M2D15M21D32M37D21M20D8M10D18M2D72M4I10M2D28M1D8M 181/245 73.9% 250/94230402 0.0% 100/245 40.8% 27744638 NA +3876 chr4 + 190214555 75729415 75729414 75729488 74 CTGCAGCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCTGGCTCAGTCTCCCGAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx:x..:...........::x...x.xx.......:..::.:..:......:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 57532289 NA +5799 chr4 + 190214555 75757483 75757482 75757580 98 TTTCTTTTTTCCAGTTCAGATTCTGAAATAATAGGTTATGCTTTGGACACACTATATAATATAATATCTAATGA---AGAAGAAGAAGAAGTAGGTAAGTT chr4 - 94230402 47985715 47985714 47985815 46244588 46244587 46244688 101 TCTTTTCTTCCCAGTTCAGATTCTGAAATAATTGGCTATGCCTTGGACACGCTCTACAACGTCATATCAAATGACCTAGAAGAGGAGGAACAAGGTAAGCT .:.:..:..:......................x..:.....:........:..x..:..::.x.....x.....---......:..:...xx.......:. 74M3I24M 79/98 80.6% 101/94230402 0.0% 3/98 3.1% 27771768 NA +3109 chr4 + 190214555 75762246 75762245 75762310 65 CTGCAACCTCTGCCTCCTGTATTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTA chr4 - 94230402 18197126 18197125 18197190 76033213 76033212 76033277 65 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA ..:..:..:xx:x..:...x:......:.x...x..x.x........::...........:.:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 57565120 NA +6083 chr4 + 190214555 75770422 75770421 75770545 124 ATTTTTGAATATTACAGAAGAAAATTCCACAAGACAGAGTGAAGATTTGGGAAGCCAATTTACAGAAATTTTCATTAAGCAGCAGGAAAATGTCACTCTTCTGTTATCTTTATTGGAGGTAAAT chr4 - 94230402 47990344 47990343 47990467 46239936 46239935 46240059 124 ACTGTTGGTGATTGCAGAGGAGAACTCACCAAAACAAGGTGATGACTTGGGGAGTCAGTTCACAGAGATCTTCATTAAGCAGCCGGAGAACGTCACACTGCTGCTGACACTCGTGGAGGTGAGT .:.x...:xx...:....:..:..:..xx...:...::....x..:.....:..:..:..:.....:..:.............x...:..:.....x..x...:.:x.x:.xx.......:.:. 124M 88/124 71.0% 124/94230402 0.0% 0/124 0.0% 27780078 NA +10951 chr4 + 190214555 75770820 75770819 75771144 325 AGGAGTTTGATTTCCATGTCCGCTGGCCTGGTGTGAAGCTTCTTACTTCTCTTTTAAAACAACTAGGGCCTCAGGTGCAACAAATTATTTTAGTCAGTCCTATGGGTAAGTGACTTATCTTTTTTATATTATTTTGATTCAAGCATGAGTATC-----ATTTCCTAGAGAAAGGGA-----CTGAA--ATGGTGTGTTAGTAAATTGTTAATAATTTGAGTCACTATTTGTATTTTTGGTCTGCCAGCATTTTTCACATGGTTGTATGTTCTAGGTGTTTCAAGATTGATGGACTTACTAGCGGATTCCAGGGAAGTTATACGTAATGATGTAAGTT chr4 - 94230402 47994154 47994153 47994472 46235931 46235930 46236249 319 AGGAATTTGATTTCCATGTCCGTTGGCCTGGAGTGAAGCTCCTCACCTCTCTCCTAAAGCAGCAAGGGCCTCAGGTACAGCAGATCATCCTCGTCAGCCCCATGGGTGAGTGCTGCAGCGTTC---TACTGCTGAGCTTTAATATGGAAACTCAGCAAATGTGGTGGAGGGTTGGAGGAATTTGAAGCATGGGGTGCTAA-AGACCTTTAGCAAGAAAAATC------TGCATCTTT----TGCACTCATTTCT---ATTG-TGTTTCTTGCAGGTGTGTCCAGACTGATGGATTTACTAGCAGACTCCAGGGAGGTTATACGCAATGATGTAAGTT ....:.................:........x........:..:..:.....::....:..:.x............:..:..:..:..::.x.....:..:......:....x:x:.x.x..:---..:.::.xx.x..:..xxxx..:xx..-----..x.xx.:...::xx...-----:....--....x...:..:-.:.::x...::..xxx:.:..------..:..:...----...xxx.....:.---..x.-...x.x..x:......x..x...:.......:........:..:........:........:............. 123M3D27M5I18M5I5M2I12M1D21M6D9M4D13M3D4M1D75M 223/307 72.6% 319/94230402 0.0% 30/307 9.8% 27776666 NA +8192 chr4 + 190214555 75774674 75774673 75774829 156 AGGGCGTCTTACTACTGCAGGCACTAACAAGAAGCAATGGTGCAATCCAGAAAATTGTTGCTTTTGAAAATGCTTTCGAGAGACTACTGGACATTATTTCAGAGGAGGGGAACAGTGATGGAGGTATAGTATGAAGAAATTATTTGAAGACATTCC chr4 - 94230402 47994678 47994677 47994825 46235578 46235577 46235725 148 AGGGAGTCTTGTTGTTACAGCAGCTGACAAAAAGCAATGCAGCCATACAGAAGATTGTTGCCTTTGAAAACGCCTTCGAGAGACTTCTGGATATTGTAACAGAAGAAGGAAACAGTGATGGAGGTATAG--------AAATATCTGAAGCTTTTCC ....x.....::.::.:...xx:..:....:........xx..x..x.....:........:........:..:...........x.....:...:.xx....:..:..:...................--------..x...:.....x:x.... 129M8D19M 116/148 78.4% 148/94230402 0.0% 8/148 5.4% 27779996 NA +11838 chr4 + 190214555 75782661 75782660 75782861 201 TTTTACATTATTTCCCCAGGTATAGTAGTTGAAGATTGTTTGATTTTGCTCCAAAACTTATTAAAAAACAACAACTCCAATCAAAATTTTTTTAAAGAAGGCTCATATATTCAACGTATGAAACCTTGGTTTGAAGTTGGAGATGAAAATTCTGGCTGGTCTGCACAGAAAGTGACCAATCTACATCTAATGCTACAGGTA chr4 - 94230402 47995715 47995714 47995915 46234488 46234487 46234688 201 TCTTTTGTTGTCTCACCAGGAATAGTGGTGGAAGACTGTCTCCTCCTCCTGCAAAACTTGCTGAAGAATAACAATTCCAATCAGAACTTCTTTAAAGAAGGTTCCTACATTCAGCGCATGAAGCCGTGGTTTGAAGTTGGGGATGACAACTGTGGTTGGTCTGCACAGAAAGTAACGAATCTCCACCTCATGTTGCAGGTA .:..x::..:.:..x.....x.....:..x.....:...:.xx.::.x..x........::.:..:..:.....:........:..:..:...........:..x..:.....:..:.....:..x..............:.....x..:.x...:.................:..x.....x..:..x...:.:...... 201M 155/201 77.1% 201/94230402 0.0% 0/201 0.0% 27786946 NA +10776 chr4 + 190214555 75787044 75787043 75787213 170 TTTCTCTTTCTTTCACAGCTTGTTCGTGTATTGGTATCTCCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGCTATGTTCCAGTGTGGGTTATTGCAGCAGCTTTGTACTATCCTAATGGCTACTGGGGTTCCTGCTGATATCCTGACTGAGGTAA-----AGCAAAT chr4 - 94230402 47996332 47996331 47996505 46233898 46233897 46234071 174 TTTCTTTTTCCCCC-CAGCTTGTCCGAGTGCTTGTGTCCCCCACGAACCCCCCAGGTGCTACCACCAGCTGCCAGAAGGCCATGTTTCACTGTGGGTTGCTACAGCAGCTCTGTACCATCCTGATGGCAACCGGAGTTCCTGCTGATATCCTGACAGAGGTAAGAGGGAGCAAAT .....:....:::.-........:..x..::.x..:..:.....x.....:..x..........x:..............:.....:..x........::.:........:.....:.....:.....x..:..:....................x.......-----....... 14M1D148M5I7M 140/169 82.8% 174/94230402 0.0% 6/169 3.6% 27790712 NA +14194 chr4 + 190214555 75790124 75790123 75790800 677 TTCTTTTTCTTTCTTCCC-CTTAACAGACCATAAATACTGTATCAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTACTTTGCATCTGTAAATGCACCTTCAAACCCACCAAGGTAGAAAAAGGGAAATACTGAGATTACTCTGAGGAAGTAAAAACTTTGGGTTGTTAATGTATCTCATATACACATCTTACTCTTTTTAAAGAAGTTTAGTTGTATGTTTTGGAACTAGAAATTATCTGACAAGATAAATGATATTGATATTTTAAAAGAGTTGGTAGTC------TTTGGAATTTAGATACTTAGATTCAGATATCATGTCGTCCACATCCTAGCTGTATGCCTTAAGCAAGCAGTCACTTC--ACTTCTGTCAGTTACAGTTTTCTGTGAAATAGAGATGGAAATACTTAACTTGCTGGTGTTCTGGTTATGATTCTTCAATCAACAAAAATGACTAGTTATTGACTTGTATACTTGGGTTGCAATGTTTCATTTTGTTCTTTTCTTTTTAAATGCAACAGACCGGCAATTGTAGTACTTCTCATGTCCATGGTTAATGAAAGGCAGCCATTTGTTTTGCGCTGTGCTGTTCTCTATTGTTTCCAGTGTTTCTTGTATAAAAACCAAAAAGGACAAGGAGAAATCGTGTCAACACTTTTACCTTCTACCATTGATGGTA chr4 - 94230402 47996597 47996596 47997113 46233290 46233289 46233806 517 TTCATTTTTTCTCTGCCCTCTTTGCAGACCATTAACACTGTGTCAGAGGTCATCCGAGGCTGCCAGATGAACCAGGACTACTTTGCCTCTGTGAATGCACCGTCAAACCCACCGAGGTAGGGGAAGAGAAGTGT---------------------ATACCTGTTGGGTAATGATGT--------------------------------------GTTGTACA----GGCAATGGCAGTGTCCTG------TAAAGGACTTGTACATTCAAGACAAGACAatagccaggtcgtttggggct---------agaactggataat-------------------------ctttaag------gtcacttccaacttgagcca---------ttctataattctaagaC-----------ACTTGTTGTTCCTCAGCCATTGTTTCTGCACACAG---------------------TTCTACCCT--------GATGGTTTTCTTTGCCCTTACC-----------AACAGGCCTGCCATCGTGGTGCTGCTGATGTCTATGGTGAACGAGAGGCAGCCCTTTGTGCTCCGCTGTGCCGTGCTCTATTGTTTCCAGTGCTTTTTGTACAAAAACCACAAAGGACAAGGGGAAATTGTCTCAACACTTCTGCCATCAACCATTGACGGTA ...x....:.:...x...-...x:........x..:.....:.....:..:..:...........::.:.....:...........x.....:........x...........:......:::...:...:.::---------------------.x.x..x.x..x.:x.:....--------------------------------------......::----..x.x.:.x.:.xx:...------....x..:x.xx.:...:x.:.x:..x:::...:.------.....:::.---------...x:::....x:-------------------------.:.....------........--....xx.:..---------....:.:.xx:x:...:-----------.....:..x.x:..x.x:xx..x....x..xx..:---------------------..x..:x..--------:...x..:x:....::...x:.-----------.....:..x..x..:..:..:..x..x.....:.....x..:..:........x.....x:.x........:..x.................:..:.....:........x...........:.....:..x.........:.:..x..x........:.... 18M1I115M21D21M38D8M4D18M6D35M6I9M9D13M25D7M6D8M2I10M9D17M11D35M21D9M8D22M11D163M 370/508 72.8% 517/94230402 0.0% 178/508 35.0% 27793527 NA +11938 chr4 + 190214555 75793663 75793662 75793907 245 TTTATTGTCTGCCT---GCCATCTTTGTAGCAACAGGTAATTCAGTTTCAGCTGGCCAGTTATTATGTGGAGGTTTGTTTTCTACTGATTCACTTTCAAACTGGTGTGCTGCTGTGGCCCTTGCCCATGCGTTGCAAGAAAATGCCACCCAGAAAGAACAGTTGCTCAGGGTTCAACTTGCTACAAGTATTGGCAACCCTCCAGTTTCTTTACTTCAACAGTGCACCAATATTCTTTCACAGGTAAAG chr4 - 94230402 47997334 47997333 47997581 46232822 46232821 46233069 248 TCTGCTGTGTGCCTCTGGCCTCTCTGGCAGCCACAGGGAGCTCTGTGTCGGCCGGGCAACTGCTCTGCGGGGGTCTCTTCTCCACGGACTCGCTCTCCAACTGGTGTGCTGCTGTGGCCCTGGCCCACGCCCTGCAGGAGAATGCCGCTTTGAAGGAGCAGCTCCTGCGGGTGCAGCTGGCAACGAGCATTGGCAACCCACCCGTGTCGCTGCTGCAACAGTGCACCAACATACTCTCACAGGTACAG .:.::...x.....---...x:::.x.:...x.....x.::..x..x..:..:..x..::.::.x..:..:...:.x..:..:..x..:..:..:..x.......................x.....:..x:....:..:......:.::x...:..:...:.x..xx....x..:..x..x..:..:...........x..x..x..x:.:..x..............:..x..:.........x.. 14M3I231M 177/245 72.2% 248/94230402 0.0% 3/245 1.2% 27796329 NA +6306 chr4 + 190214555 75795308 75795307 75795600 293 TGAATAATTTGTAATGTATAATTTGCAGGGTGATAAGATCGACAGACGGGTATGTATCACTTGATTAAGCTTAGGCATTTTCCTCTTATAGCAAAGCTTTTTCTCTGTCTTGGGTTTTGCTGATTGGTTTTTTTTTAACTGCTTGTTTGAAGTTACATTCTACTCACACTTTTGCGTGTCAGCC--AATTTATTTCTATTGTAAATGGCTCTCCAGTTTTTCTCCATGGGATATTGTATTGGTGTTACTAAACACTGTGGGAATGAGAATCTGAATCTATACTTGTGCTTCTTCT chr4 - 94230402 47997833 47997832 47998114 46232289 46232288 46232570 282 TGAGTAACATGT---GTGTAACTTGCAGGGCGATAAGATCGACAGACGGGTATGTATCTGTTGGCACAACTGTGGCA-CTTCCTTGCCCAACGTGGCCTTTTCTTTTGCCTTGGGTTTGCTGGGAGG--TTTCCCTAACTGCTCCTCCATGTGT---TCCCACTCACAGCTCTGTGTTGCAGTTGGATTTGGTTTCTCCTGGCACAGCCATAACCACTTCTTTCTTTG---TCTTCTGGGGGTGCTCCACAACACTCTGGG-ATAAGGATCTTGGGATACACGGGTGCTTTCTTT ...:...:x...---..:...:........:...........................xx...::xx.:..xx....-:.....:x:x:.:.:x:..:......:.xx.:.x..x.......:xx..--...:::........:x.:::x:xx.---.:.:.......x:.:..:..xx...::--.x..x:.....x:..xx.xx.x.x:xx.x::..:.:..:x..---.x..x.:xx....:.x.xx......x....-..:..:....x::xx..:..xx......::.:. 12M3D62M1D49M2D25M3D27M2I42M3D30M1D33M 179/280 63.9% 282/94230402 0.0% 15/280 5.4% 27797475 NA +7624 chr4 + 190214555 75799608 75799607 75799766 159 TTTATCTGTTGCAGGGAAGCAAAATACAAACAAGAGTTGGATTATTAATGTTGCTTTGTACCTGGCTAAGCAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAGCCAATGTTCCATTTGTATCCTTTATGTTTTAGTA----------ACGTACATGTAAGT chr4 - 94230402 48000406 48000405 48000574 46229829 46229828 46229997 169 TTTGTTCCTTTCAGGGCAGCAAAGTGCAGACCCGGGTTGGACTGTTGATGCTGCTCTGCACGTGGCTCAGCAATTGCTCCATTGCTGTCACGCACTTCCTGCACAACCCAGCCAACGTGCCCTTTGTATCCTTGACCTGTCTGCAGGTTAGCATCACTTGCATGCAAGT ...:.::x..x.....x......:.:..:..xx.:......:.:..:...:....:..:..x.....x........::.......x..x.....:..:..x.....::.......:..x..x...........x.:x.x.:x.:.----------..x.:....:.... 145M10I14M 117/159 73.6% 169/94230402 0.0% 10/159 6.3% 27799202 NA +8306 chr4 + 190214555 75800322 75800321 75800479 158 ATCCTTAGCCTCCTTAACAAAGATTTCAGCTTACAGGACAAATTGCAGAAAATCTTGGAGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCTTTTGTTGGGCATTTCGATTTATTTCAATGATAACTCACTTGAGAGCTACATGAAGTAAGTAAGG chr4 - 94230402 48000711 48000710 48000868 46229535 46229534 46229692 158 ATCTCCAGCATCCTTAACAAGAGCTCCAGCTGACAGGACAGATTGCTGAGAACCTGGGAGAGGAGGAGCAGCTGGTGCAGGGCCTCTGCGCACTGCTGCTTGGCATCTCCATCTACTACAACGACAACTCTCTGGAAAACTACAGGAAGTGAGTGTGG ...:::...x..........::::.:.....x........:.....x..:..:..x.....:..:......:....x..:...:.x..:..x..x:..:.x.....:..x..:..:.x...:..:.....x..x..:.:.....x.....:...:x.. 158M 115/158 72.8% 158/94230402 0.0% 0/158 0.0% 27799611 NA +16275 chr4 + 190214555 75800616 75800615 75801214 599 AGAGAGAAGCTAAAACAACTGATTGAGAAGAGGATTGGCAAAGAGAATTTCATAGAGAAACTAGGATTTATTAGCAAACATGAGTTGTATTCCAGAGCATCTCAGAAACCCCAGCCAAACTTTCCCAGTCCAGAATACATGATATTTGATCATGAGTTTACGAAGCTGGTAAAAGAACTTGAAGGTAAGACTGAAGATTTATATTGATATTTGATGGAAAGTAATTATATTTATATTGTACATGTATATTCTGGATGCATACAGGTTATATGGTAACTCTAAAGGTATATTTTCTTCCTAGCTCTTGATCTGTAGCCCATTGAAGGACATTTGGCTTTCAGTAGGATTGAAAAGATTATTTCTTACCTATCATGGAGTTAGGTTATATGTTTTTACT----AAGTCTTAG-----TAGTAAAATAGTATTTAAAACATTTAAAACAAATTTTAAATA-----AGCTTCCTTTTATAGGTGTTATAACTAAGGCTATTTATAAGTCCAGTGAAGAAGATAAAAAAGAAGAAGAGGTGAAAAAAACATTAGAACAGCATGACAATATTGTGACTCACTACAAAAATATGATTCGAGAGCAGGTAAGTACTAATGA chr4 - 94230402 48001354 48001353 48001940 46228463 46228462 46229049 587 AGAGAGAAGTTGAAGCAGCTTATTGAGAAGAGGATTGGGCGGGAGAACTTTGTTGAGAAGCTTGGCTTCATCAGCAAGCACGAGCTGTATTCCAGAGCTGCACAGAAGCCACAGCCTGGCTTCTCCAGCCCCGAGCACATGATGTTTGATCACGAATTCACCAAGCTGGTGAAGGAACTGGAGGGTGAGAGACACTGCTTATTTCTATATTCCTCGTTATGAGCTGATGGCTGAAGTGC---TGAATGTCCC--ATTAACAGCGGTGTGATGG-AGTTAAAATGCAGTATCTTCTCTTCTGTTTTTCA-----AGACTGTGTGTGACCACTGTATTTTCTCCAAAGT---ACACACTGTGTTTGTCATTTCCTGAACTGAG---------TTATACTGGGGGAGGCTGAAACTGCTATGAGGACAGAAC---AGATGAATGAAGCAGGCTGTGGCTGATGGCAGCTGTATTTGGCAGGTGTCATAAGTAAGGCGATCTACAAGTCCAGCGAAGAAGATAAAAAAGAGGAGGAGGTCAAGAAGACCCTGGAGCAGCATGACAACATAGTGACTCACTACAAAAAGGTCATCAGAGAACAGGTGAGGAGCAGTGA .........:.:..:..:..x.................xx::.....:..::.x.....:..x..x..:..:.....:..:...:.............xx.x.....:..x.....x::...::....:..x..::.......:........:..:..:..x........:..:.....x..:...:...xxx.xx::....x.:x.....:xx:.xx.x.x:x.x..:x:.:x.x..:---..x..:.:.:--..xx.:.xx...xxx....-.::.xx..x.xx:...:....::::x.:.:..x.-----..x.::.xx:x.:x..:.xx::....xx:.:::.---.x.x.:.:.x.:.xx.x.x..x..:.x.x..---------..x....----:..x..x.:-----..xx.::.:..x.:---.:.::xx.:..:..:::.x.::x.:-----....x:x...x::......:....x......x..:..:........:.................:..:.....x..:..:..x:.:..:...........:..x.................x:.x..:x....:.....:..x.x:.:... 239M3D10M2D19M1D34M5D34M3D31M9D7M4I9M5I14M3D25M5I151M 376/573 65.6% 587/94230402 0.0% 40/573 7.0% 27799262 NA +10187 chr4 + 190214555 75804072 75804071 75804278 207 TTCACCTTCTTAA--TGCTAA---CGAGTATGACTTTAAAACACATGAATTATGTTTTGTTTCACAGGATCTCCAACTTGAGGAATTAAGGCAGCAGGTTTCTACATTAAAATGTCAAAATGAACAGCTCCAGACGGCAGTCACACAGCAAGTATCACAGATCCAGCAGCACAAAGACCAGTATAATCTTCTTAAAATACAGCTAGGTAAGC chr4 - 94230402 48002463 48002462 48002669 46227734 46227733 46227940 207 TTTTCCTTCCTAAAGTGCTATATTCCAGTATTACT-----GCAAGTGCTCTCTTTTTTCTTTTCCAGGATCAGGAGCTTGAGGAGTTAAAACAACAAGTTAGCACATTAAAATCTCAAAATGAGCAGCTTCAGGTGACAGTCACGCAGCAAGTGTCACAGATCCAGCAGCATAAGGACCAATACAACCTCCTTAAAGTGCAGCTAGGTATGC ..:x.....:...--.....x---.x.....x...-----:..x:..xx:.x.x....x...:x.......xxx.:........:....::..:..:...xx:..........x.........:.....:...::.:.......:........:.................:..:.....:..:..:..:......:.:..........x.. 13M2I6M3I11M5D172M 156/202 77.2% 207/94230402 0.0% 10/202 5.0% 27801609 NA +7396 chr4 + 190214555 75805121 75805120 75805307 187 TGTTATGT-CTGTCTAACAGGAAAAGACAATCAGCATCAAGGTTCTTACAGTGAGGGGGCTCAGATGAATGGCATTCAGCCAGAAGAAATTGGTAGATTGCGAGAAGAGATAGAAGAATTAAAACGTAATCAGGAACTTTTACAAAGCCAGCTGACTGAAAAGGACTCTATGATTGAAAATATGGTAA chr4 - 94230402 48002930 48002929 48003117 46227286 46227285 46227473 188 TGTTATGAACTGTCTGCTAGGAAAGGACACTCAGCACCACAATTCCCATGGCGACACGCTGCAGATGAATGGCATTCAGCTGGAAGAAGTGAGCAAACTGCGAGAGGAGCTGGAGGACTGGAGGAACAGGCATGAGCAGCTGCAGGGGCAGCTCAAGGAGAAGGATGCTGTGATTGAGAACCTGGTGA .......x-......:x:......:....x......:..x::...::.::.:..x:x.x:x...................::......:.x:.:.:.:.......:...x.:..:..x.x:.::x::.:x..x..:.xx:.:..::.x.....x.xx..:.....:x..:.......:..:x....:. 8M1I179M 124/187 66.3% 188/94230402 0.0% 1/187 0.5% 27802191 NA +3017 chr4 + 190214555 75817617 75817616 75817657 41 CTGTCTTTAAAAACAAAAGGCAAAAAACAAAAAAAAAAAAA chr4 - 94230402 61963818 61963817 61963858 32266545 32266544 32266585 41 CTGTATTTAAAAACAGAAGGGAAAAAAGAAAAAAAAAAAAA ....x..........:....x......x............. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 13853799 NA +3070 chr4 + 190214555 75822964 75822963 75823022 59 TTTCCAGCTGTGTGGCTTTGGGCAAGTTATTTAACCTCTCTGTGCCTCAACTTCTTCAT chr4 - 94230402 11909560 11909559 11909618 82320785 82320784 82320843 59 TTTCTGGCACCGTGACCTTGGGCAAGCCATTTAACTTCTCTGTGCTGCTGCTTATGCAT ....::..xx:...:.:.........::.......:.........:x.x:...x.x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63913404 NA +3262 chr4 + 190214555 75824768 75824767 75824871 104 CAAAAAAATATATATCTATATATAGATATATATAATATATATATCTATATATAGATATATATAATATATATATCTATATATATAATATATAACATATATTATAT chr4 - 94230402 72897605 72897604 72897705 21332698 21332697 21332798 101 caaaaaaaaaaacaTAAAAAATAAGAAA---ATAATATATATGTGTGTATATATATATAAATCTCATATTTATCTTGACGTTTAATGTATAGTTTTTATTACAT ........x.x.:..xx.x.xxx...x.---...........:.x.:......x.....x..xx:....x.....xx.::.x....:....::x.x.....:.. 28M3D73M 71/101 70.3% 101/94230402 0.0% 3/101 3.0% 2927163 NA +3033 chr4 + 190214555 75824886 75824885 75824952 67 ATATCTATATATAATATATATATCAATATATAATATATATCTATATATATTATATATATTTATATAT chr4 - 94230402 65187299 65187298 65187365 29043038 29043037 29043104 67 ATACTTGTGGATATTATATTTATGGATAGATGATATATATATATGGATATTATACTTATGGATATAT ...::.:.:x...x.....x...x:...x..:........x...:x........:x...xx...... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 10637587 NA +3196 chr4 + 190214555 75824936 75824935 75825002 67 TATATATATTTATATATACACACATATATATAATATATACATATACAATATATG-----TTTTTGTTTTCTA chr4 - 94230402 65311263 65311262 65311334 28919069 28919068 28919140 72 TGCATATATTTATATATACACACATATATATGGACTGTGCAAAAACAGTGTATGCGTGCTTTTCCCTTTTTA .::............................::xx.:.:..x.x...:.:....-----....:x:...:.. 54M5I13M 51/67 76.1% 72/94230402 0.0% 5/67 7.5% 10513673 NA +3060 chr4 + 190214555 75826569 75826568 75826624 56 CACAATAAATATTTTTTCTTTTTCTTTTTTTTTTTTTTTTGTTGTTGTTTTGGAAA chr4 - 94230402 37858588 37858587 37858643 56371760 56371759 56371815 56 CACTTTGAATTTTATTCCTTCTTCTTTTTTTTTTTTTTTTGTAGTTATACTGTAAA ...xx.:...x..x..:...:.....................x...:.x:..x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 37967981 NA +3189 chr4 + 190214555 75840749 75840748 75840807 59 AAAACAAACAAACAAACAAAAACAAAACCATGGCATCTTATGATGTTTTGTGATGATTA chr4 - 94230402 29573824 29573823 29573882 64656521 64656520 64656579 59 AAAACAAACAAACGAACAAAAAAAAGGCCAAGCATGCTTATGATGTTCTGTGACTTTTA .............:........x..::...x.xxxx...........:.....:xx... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 46266925 NA +3009 chr4 + 190214555 75850233 75850232 75850290 58 AGACTCCGTCCTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATAG chr4 - 94230402 83252371 83252370 83252428 10977975 10977974 10978032 58 AAACTCCAACTACCGTTCCAGAGAAAAAAAAAGAGGGGAAAAAATGAAAAAAAAATAG .:.....:x.:x....::..:.:.........:.::::......x:.......:.... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -7402138 -86828264 +3036 chr4 + 190214555 75856839 75856838 75856912 74 AAGCAAGGTATA---TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTCTGAG chr4 - 94230402 57764642 57764641 57764718 36465685 36465684 36465761 77 AAGCATGGGCTAACTTATACATATATAAATATGTGTATGTACATATATTACTCTTGTCTTCTTGTTTCACTTCCAAG .....x..xx..---....:.......x....:.:...:..:.......x:.:..x.:..:..x...:x:...::.. 12M3I62M 53/74 71.6% 77/94230402 0.0% 3/74 4.1% 18092197 NA +3024 chr4 + 190214555 75856839 75856838 75856909 71 AAGCAAGGTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTCT chr4 - 94230402 68965749 68965748 68965819 25264584 25264583 25264654 71 AAACAGTGTATATGTACACATATTTTTTTTTAAATGCATGAATGTTTTCTTTTTTGTTCTTATTTTTTACT ..:..:x......:..:.:....x.x.x.x..x..::..:x..:....:......x..:..x......x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 6891090 NA +3366 chr4 + 190214555 75856845 75856844 75856899 55 GGTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681929 8681928 8681983 85548420 85548419 85548474 55 GATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .:....x..........:...::.:.:.:...:.....x:.:............. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 67174916 NA +3032 chr4 + 190214555 75856847 75856846 75856897 51 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681933 8681932 8681983 85548420 85548419 85548470 51 TAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..x..........:...::.:.:.:...:.....xx.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 67174914 NA +3068 chr4 + 190214555 75856847 75856846 75856902 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -16878501 -77351901 +3282 chr4 + 190214555 75856849 75856848 75856904 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -16878499 -77351903 +3566 chr4 + 190214555 75856851 75856850 75856928 78 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTCTGAGACAGGGTCTCACTGTG chr4 - 94230402 92735348 92735347 92735420 1494983 1494982 1495055 73 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCC-----CTGAATCTCCATGTG .::....x.....:...:..:.:...............:.x.........:.x...:.-----.x.::....xx.... 58M5D15M 56/73 76.7% 73/94230402 0.0% 5/73 6.8% -16878497 -77351905 +3191 chr4 + 190214555 75856853 75856852 75856907 55 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735402 1495001 1495000 1495055 55 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT .::....x.....:...:..:.:........x......:.x.........:.x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% -16878495 -77351907 +3030 chr4 + 190214555 75856855 75856854 75856907 53 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200326 90030077 90030076 90030129 53 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATT ..x............:.:.:..............::...:xxx.......x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 71656581 NA +4412 chr4 + 190214555 75879647 75879646 75879717 71 TTCTTTTTCTATCTTTGTTAGGAGACTTACATGGCCAATTGGATGACTTAATATTTATATTTTATAAGGTA chr4 - 94230402 42776388 42776387 42776458 51453945 51453944 51454015 71 TTGTCTTTTTGTGCCTGTTAGGAGACTTGCATGGCCAGCTGGATGACTTGTTCCTCATATTTTATAAGGTA ..x.:...:.:.x::.............:........::..........:x.x:.:............... 71M 56/71 78.9% 71/94230402 0.0% 0/71 0.0% 33103259 NA +3655 chr4 + 190214555 75880875 75880874 75880948 74 CTGCAGTCTCTGTCTCCTGGGTTCAAGTGATTCTCCTACCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...:.:xx:x..:.............x...x.xx:x........::::.........:......x.:.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 57683749 NA +4766 chr4 + 190214555 75886023 75886022 75886086 64 TTAGGCCATTATGAGACAGGTTAGTTTTACCCTACTGATGATCTGTTGTTGCCATGGTAATCCT chr4 - 94230402 68039691 68039690 68039754 26190649 26190648 26190712 64 TTAGATCATCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCGCTAGTAATCCT ....::...::...............................x.........xx.:........ 64M 56/64 87.5% 64/94230402 0.0% 0/64 0.0% 7846332 NA +3636 chr4 + 190214555 75886119 75886118 75886184 66 GTGTATGTGCTTGGCTAAGGAGCCAATGGGACAAAGCTACCCTCTGTGGGATTTTGACTGAATGCC chr4 - 94230402 54545279 54545278 54545344 39685059 39685058 39685124 66 GTTTATGAGCTTGGCTGAGGAGCAAAAGAGACGGTGCTACCATCTGTGGGATTATGACTTGCTGTC ..x....x........:......x..x.:...::x......x...........x.....x:x..:. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 21340840 NA +3980 chr4 + 190214555 75909814 75909813 75909887 74 CTGCAGCCTTAAACTCCTGGGCTCAGGTGATCCTCCCACCTCAGCCTCCCATGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..:..:.....:...:...x.:.x.xx:x........::..x........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 57712688 NA +3745 chr4 + 190214555 75909989 75909988 75910060 72 CTGCAACCTCCACCTTCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x....:x........::x...x.xx.x.........:...........:......x.... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 57712863 NA +3494 chr4 + 190214555 75932558 75932557 75932630 73 CTGCAGCCTCGACCTCCTGGGCTCAAGCAATCCTCCCACCTCAGTTTTCCAAGTAGCTGGGACCACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x:.x..:.....:.....::x.:.x.xx:x.....::..:...........:..:...x..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 57735432 NA +4211 chr4 + 190214555 75940868 75940867 75941115 248 CGGCTGACAGCCCGGCCCCGGCCAGCAGCAGCAGCAGCAGGGACGGAAGCCCCGGGCGCGCCTCCCGGTCCGCGGTCCGCATGGCTCGGGCTCCAGCGGCCGCAACTTGGAGACCTGCAGCCGCTGTCGGAGCCCGGGTAAGCCGTGGAGGAGGAGGAGCTGGGGCTGGGCTGCGATCGCTGGAGGTGGGGCCCGC--GCACGACCCGCCCGCCCCTGTCACCGGCAAGCCGGAGCGGCGACACCTCCCG chr4 - 94230402 93813686 93813685 93813908 416495 416494 416717 223 CGGCCCCCGGCTCGGCCTCGGGCGGCAGCAGCGGCAGCACGCCCGGCTCGCCCAGCAGCTCCTTCAGGTCCCCGG--CGCACGGGAAGGGC----GAGCCCATggccgggcgggcggcggc-----gcggggcTCGGGC---------AGCGGCAGGAACGCGGGCGAGGCGACGGGCGGCGGGCGAGGACTCTGCGGGCACGG------GGCTCCCGGTGCGGGCAGGCCGGGGC-CCGGCTCGTCCCG ....:xx.:..:.....:...x.:........:......x.xx...xxxx...:.xx..x...:.x.....x...--....:..xxx....----.x.x..::::.:x..x.:x.x..:..-----x...:..:....:---------..x:.x....:.xx....x:...x:..:x..x:..:x.x..:x:.:..--.....:------x..:..:.x::.x....:.....:..-x..:.x.x..... 75M2D14M4D26M5D13M9D48M2I6M6D26M1D13M 142/221 64.3% 223/94230402 0.0% 29/221 13.1% -17872818 -76357584 +3783 chr4 + 190214555 75941430 75941429 75941498 69 CTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTCCACCACCAT chr4 - 94230402 18197139 18197138 18197205 76033198 76033197 76033264 67 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:...........:.x...x.xx.x........:............:.:....--...x......::. 54M2D13M 54/67 80.6% 67/94230402 0.0% 2/67 3.0% 57744291 NA +3327 chr4 + 190214555 75942296 75942295 75942409 114 CTTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAATGCATAGTAGAAACTAAACACATTTTTTT-TTTATTTTTTACCAATTTTAGGAT chr4 - 94230402 49250037 49250036 49250138 44980265 44980264 44980366 102 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATG-------------AACTACATTCCTTTATATGTTCTTTGCAAATGTTTGCAT ...::..::.xx.........:..........:.::x::..:..:.....::..::.:.....-------------..x:.....::...-.x.:..:...:.x...x..x.x.. 63M13D14M1I24M 69/101 68.3% 102/94230402 0.0% 14/101 13.9% 26692259 NA +3502 chr4 + 190214555 75942309 75942308 75942438 130 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAATGCATAGTAGAAAC-TAAACACATTTTTTTTTTATTTTTTACCAA----TTTTAGGATGAAGAAATACAACTTTTATAATCAATCAC chr4 - 94230402 20475871 20475870 20475994 73754409 73754408 73754532 124 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAATTCTTTTTTTTTTTTTTTTTTTGGAATATTTTTTAGG-----------TAACTAATATAATCTACTAC ...................:..::..:x..::x.::..:.x.xx:.::x:....:x..:...-....:x.x..........x......xxx..----.......-----------:....xx.......x.::.. 62M1I30M4I7M11D20M 84/119 70.6% 124/94230402 0.0% 16/119 13.4% 55466438 NA +3274 chr4 + 190214555 76010331 76010330 76010386 56 TGTCTTCTCTCAGTTTTCTTTTCTTTTCTCCTTCTCCTTCCCCTCCCCTCTTCTTT chr4 - 94230402 90656313 90656312 90656368 3574035 3574034 3574090 56 TGCCTTCTTTTATTTTTTCATTCCTTTTTCCTTTTCTTTCCCCACCCCCCCTCTTT ..:.....:.:.x....::x...:...:.....:..:......x....:.:..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% -14645982 -79584420 +3092 chr4 + 190214555 76010344 76010343 76010389 46 TTTTCTTTTCTTTTCTCCTTCTCCTTCCCCTCCCCTCTTCTTTTCT chr4 - 94230402 49389482 49389481 49389527 44840876 44840875 44840921 46 TTTTTTTTCCTTTTTTTTTTTTCCTTCCCCCCCCCCCCCCTTTTCT ....:...:.....:.::..:.........:....:.::....... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 26620862 NA +3030 chr4 + 190214555 76051860 76051859 76051921 62 AGGATGTTTCTGAGTTTATGTTGTATCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 45399567 45399566 45399628 48830775 48830774 48830836 62 AGTATATTCTTAGCATAATGTGGATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTG ..x..:..::.::xx.x....x.xx::............................::..:.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 30652293 NA +3125 chr4 + 190214555 76051862 76051861 76051918 57 GATGTTTCTGAGTTTATGTTGTATCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929900 18929899 18929947 75300456 75300455 75300503 48 GATGATACTGAATTT---------CTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ....x.x....:...---------..............:.................. 15M9D33M 44/48 91.7% 48/94230402 0.0% 9/48 18.8% 57121962 NA +3388 chr4 + 190214555 76051872 76051871 76051921 50 AGTTTATGTTGTATCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 18929899 18929898 18929948 75300455 75300454 75300504 50 AGATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ..x.x..::..x..:.............:.:................... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 57121973 NA +3014 chr4 + 190214555 76051876 76051875 76051924 49 TATGTTGTATCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 24368491 24368490 24368539 69861864 69861863 69861912 49 TATGTAGCAGTTCCCTTTCTTTCCTTTTTTTTTTTTTCTCCTTTTGAGA .....x.:.x:..:..:...:..:.............:.::........ 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 51683385 NA +9856 chr4 + 190214555 76115042 76115041 76115513 472 GGACAATAATCATTAAACACAGATTATGTTTAAGAAAATGCTGTTGTAA-------------AAATGTACAATAGTACATACAATTTTG----------GTAATTATGCA---------------CTTCTTTTAAAGTAAATACAGCTTTT--AGATATAAATCTTTCAAAGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAAC------TTCTCAAAAAACCAATCCAAGAAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTAA---GAAGATGCATTTCACA-AACCTTTACACAAGTTTGTGAACTGTCAACTAAAGACACCACCTCTGATGTGGATGGTTTCATTCAATCCATGTTCGACCAGCTTTATATCTTCTAGATCGTCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTAGAACAAATTAAGAAAC chr4 - 94230402 42785717 42785716 42786202 51444201 51444200 51444686 486 GAACAAT--TCCCTCAGCACAG--CATTTCTAAGACAATTCTGCTGTAATTAAAGAAAAAAAAAATGTACAATAGTACATATTGTTTTATAGTAAAACAGTATCTGAACAGATTCAGTTTTCCTTCTTTTTTTAAAGCGTATACAGCTTTACAAAATATAAACCTTCCAAAGGTCAAATTCAAA-AGCTTAGAAGAGGCT-TTGCAAATTCTAAAAAAAATAACA-GCCAATACACCATTGCTCCTGAAAGATGCA--------------CGTTTTATTTTACCTCAC-------CAGTTTTGGCCTT--GGAAGGT--GAACCATAAACTCGAATA-ACATTCCACGTGAGCCCAGCAGCATCCTGCAG---GTCAACTGAAGAAACCTCCTCTCATGGGAAGGCTCTCATTCAACTCATGCTCTATCAGTTTGATGTCCTCCAAGTCATCCTTTATAATGCTAATTAGGTGACTCAGGCCTTCTTGCTGCTGCTTCAGATGCTGCAGGTAGTTTAAAAAC .:.....--..x:.x.:.....--:..x.:.....x...x...:.....-------------...................:x:....:----------...x:.:x:..---------------...:........::x..........x--.:.......:...:.......:xxx..::..-....xx..:.x.:..-..x..:...:x.x:..x.:...:x-.:..:..x..------.:..x...:.xx..--------------:.....x....x..::x.-------.:....::x:...--.......--..xx..xx..---...x.-:....:...:-:.x.::x:..xx.x::..:::---.......:....x...x.....x...x.:.x.x.:........::....:..x.:...:..x..:..:..:.::..:..:..x..:........:.::..:..x........:..:..:..:....:.....:x.:xx.:..x.:.... 7M2D13M2D25M13I27M10I11M15I26M2I31M1D15M1D24M1D10M6I14M14D18M7D13M2D7M2D10M3I5M1D10M1I21M3D149M 303/436 69.5% 486/94230402 0.0% 86/436 19.7% 33329325 NA +12329 chr4 + 190214555 76117612 76117611 76118202 591 TGTGAAGTGGTGAGCTCACACTTTAAATAATGCAGCC--TCATGCAACACTTACCTGCTTGATTTCTCGTAACAGATCTGCATCTATGTAATACCTTTCTTCAGATCTGACTGCTCCAAAATGATTCTGCATCCTGATTTGAGACATCAATTCATTTAGTCGGCCCT---AAAAGTTAAGACTGAGTC-AAATTACAACT-GCCGACGAAGACTTGTAAAAGA-----CAATGTTTT--------------------------CTTCTGAAAGGATGGTTTCAAAAC-------------------------CATCTATTAAAAATTTCTATTTCTCTCTCTGTACATTATATT-CGAAACACTAATACTAGCCAAAAGAACCATGACTGAGTTTAC----TTTAGAAAG---GAAGTTCTAATTGGAGAT-----AAGAAACACAAGTATACAAAATTCCTGCTTGAAG---ATTACATAACTTTTTGTCTGCAGATCCACCTG---------------------------------AAACAAATTT-----TAGAATTATGG-------TCTTAGAAGTGGTTACCTTGAACTGAGTAGGTGCATTTAGTTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATTTCCTGTTTGATTAGGACCTATACAA chr4 - 94230402 42786464 42786463 42787166 51443237 51443236 51443939 703 TATGAAATGGAGAGC----ATTTCA------GCAGTCAACCAGGTAATACATACTTGCTTTATTTCCCTTAAGAGGTCTGAATCTATGTAATAACGCTCTTCAGCCCTCACTGCTCCGAAGTGGTTTTGCATCCTGATTTGGGACATGAGCTCATTCAGTCTGCCCTGTGAAAGGAGAAGAAAGAGACTGAAACACTACTCATTTAcatagaattcttagagagttggaaatgatctttaaaggccCCGTACATCTGTCAGAGCTCCAGAGTGCATCACTCCAAGGCACAGGGCAGGAACCTTTACTGCTTATTTCAGTTATAACTCtcttttcttttcttttttttttttttTGTGGAAGGC--ATGTAAAGAGCAAGCAACACAACTACTTTTAAAGAATTTAAAAATACCGAAATACCTACCAGTCATGCAGCAGAAAACACAATGCTCTAATAATACTGCTGGACTTCTCTTCTACAAACTTTCTCCAGTAAATGCACATGCATGGTTTGGAAAACTTGATTTGCAGAGGAAAAGAACAGGGTTAGTGGTAAAGTTCTGGGCAAAAATCTTTCAACTACTCACCCTGAACTGTGTGGGTGCATTAAGTTCACACTGAATTATATCTAACTGTACACGAAGCTGTTCTTCATCTGCTTGAATGGCATAGCCACTTTTCCTTTGGATCTCTTGTTTTATTAACACCTGCAAAA .:....:...x....----.:..:.------....:.--:..x.:..:..x...:.....x.....:.x...x..:....x............x.x:.......x:..x........:..:..:..:..............:.....x.::.....:....x.....---...:.xx....xx...x.-:..x:..x...-:::x..:x...x..x.x.:...-----x....x.:.--------------------------..:.x..:x.x..x::.:...::.-------------------------:x..x:...x..x.:...x..::.:...:.x.x:x..x.x..-:.:..x:.--..::x.:xx:x...x.x..::...:xx....x----....:...x---...:.x.:x.:::.xx..-----.::........xxx.x:..x.x.x.....x..xx---x..x:.:..x:...:x:.x.:.:..x...x..---------------------------------:....::x..-----..:.:..x...-------....xx..x.:x.:...:.......x..:........x.......x......::....:.:...x..x..x.:...:........x..:...........:.....:........:..:..:.....x....:x....::.x.. 15M4D6M6D6M2I128M3I18M1I11M1I22M5I9M26I24M25I42M1I8M2D32M4I9M3I18M5I34M3I32M33I10M5I11M7I144M 395/579 68.2% 703/94230402 0.0% 136/579 23.5% 33331148 NA +3373 chr4 + 190214555 76119443 76119442 76119524 82 TGCAGCATCGATCTCCTAGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCTCACCACCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .:....x:x:.x..:..:..:.....::x.:.x.xx:x........::.............:....x...--......::.. 70M2D10M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 57922316 NA +7650 chr4 + 190214555 76124643 76124642 76124759 117 TACTACCTGTAAAGTTCTATGGGAAAGATCCATGAGTTTCCTCTTGTATTGTGCAATTTTGGCTACAGATGTAGTTTGATTCTTTTGTAGCTCACTAATATCTTCAGATATGATCTG chr4 - 94230402 42787496 42787495 42787612 51442791 51442790 51442907 117 TGTTACCTGTAACGTTCTGTGAGAAAGAGCCATCAGCTTCCTTTTGTACTGTGCAATTTTTGCCATAGTTGTAGTCTGGTTTTTCTGCAGCTCACTGATATCTTCTGATATTATCTG .::.........x.....:..:......x....x..:.....:.....:...........x..:.:..x......:..:..:..:..:........:........x.....x..... 117M 95/117 81.2% 117/94230402 0.0% 0/117 0.0% 33337147 NA +3232 chr4 + 190214555 76128366 76128365 76128430 65 ACTTGAAATAATAGATTAAAAGGAAATGCTGAAAAAAAAAAAAAAGTCCAAATAACTCAAAAGAA chr4 - 94230402 31897033 31897032 31897097 62333306 62333305 62333370 65 ACTTAAAATGACATATAGTAAGGAAATAATGAAAAAAAAAAAAAAACCCACAAAAAACAAAACAA ....:....:.:.x..x:x........:x................::...x.x..xx.....x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 44231333 NA +3030 chr4 + 190214555 76129944 76129943 76130007 64 CTTTAAGTATTTAATTATGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGAG chr4 - 94230402 60463223 60463222 60463286 33767117 33767116 33767180 64 CTTTGATTAACCACTTTAGAGAGTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGG ....:.x..x::.x..xx..:....:x...:..xx..........x.............:..:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 15666721 NA +7008 chr4 + 190214555 76130640 76130639 76130758 119 AAAGCTAA--ATGCTTACATCTAATCTGGTTTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACCTG-AAGAAA chr4 - 94230402 42788107 42788106 42788228 51442175 51442174 51442296 122 AAAACTAAGAAAACTTACATCTAAGCGAGTTTGATGCTGTTTGGTCATCTGATCTTGGACCTTCAATCTTCTCAACAGTTCTTTGAAACCCACCATGGGCACAGGAATAAGCCTACAAGAAA ...:....--.x:...........x.x:...........:..:..............:.......:.....xx.:x.....:..:...........x..:........x.:...:-...... 8M2I105M1I6M 98/119 82.4% 122/94230402 0.0% 3/119 2.5% 33342533 NA +5001 chr4 + 190214555 76131224 76131223 76131309 86 ACTTACTTTTCAGAATCAGGGTTATCTACCTTGGCCTGTTCCCAGATAATAGGATCAACACCT----ACCACAAATAAAAAATATTTTTT chr4 - 94230402 42788531 42788530 42788620 51441783 51441782 51441872 90 ACTTACTTGTCAGGATCAGGATTATCAACTTTGGCTTGTTCCCATATAATAGGATCGACACCTTAAAAAAAAAAAGAGAAAAGGTTTTTT ........x....:......:.....x..:.....:........x...........:......----.xx.x...x.:....x:...... 63M4I23M 71/86 82.6% 90/94230402 0.0% 4/86 4.7% 33342693 NA +12959 chr4 + 190214555 76132517 76132516 76132761 245 ACATACCAGCAGGAGGATTCTGTAAAAGCTGTTTGATCTGTGCAGGAGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTCAACAACATAAATAACAACTTCTGTCCTGAAGGAAGAATAACCAATTTATAAAATATGGAGCACAAAA chr4 - 94230402 42789690 42789689 42789927 51440476 51440475 51440713 238 ACATACCAGCAGGGGGATTTTGAAGGAGCTGTTTGACTTGGGCTGGGGAGAGCTCCGTTCTGGCCATGGAGAAGCTGACCCCCAGCTGCTGCAGGGATGACTTTATGTTGGCTTGTTCAAAGTGGGCATAGAGGGTGGTTGCTGGAACTCTCCTTGAAGTGCCATTGGGTGAACGCTCAACGACATAAATGATCACTTCTGTCCTG-AGCAAGACAAAC------ACAAACTGTGAGACAAAGAA .............:.....:..x.::..........::..x..x..:..:..:..:.....:.:...:..:.:.x.x..x..x..:.......:xx:..x:.....:..............:........x..x..x..x...........:........:.....x..:...........:........:.:x............-..x....xx...------.:...x.:..:::..x.:.. 206M1D12M6D20M 184/238 77.3% 238/94230402 0.0% 7/238 2.9% 33342827 NA +13748 chr4 + 190214555 76134141 76134140 76134382 242 CACAGAAATAAACAGTATAT-TTATGTATACTTACTGATCATCTGGCAATGTTTTAGTGCCCTCTACATTTACAGTAAGGGTCTGGTTTCCTCCCAAAACTTTATGCAATGATTCTACCAACTGTTGTTGTTGGCTTCGAATCTCTGTTTCTTTTTTGTTGAAAACTAAAACCACTAGCCCATCTTCATCTTTATTACTGGGCATGCAACTATAACCTACTGCCTGTGGAATGACAAAATAAA chr4 - 94230402 42790407 42790406 42790648 51439755 51439754 51439996 242 CAAAGAAAAAGCCAAAGTGTGTCAAGTTCACATACTGGTCATCTGGCATCGTTTTAACACCTTCCACGTTGACAGTAAGGGTCTGGTTTCCTCCCAGAATTTTATGTAGTGATTCTACGAGCTGCTGCTGCTGGCTTCGAATATCTGCTTCTTTTCTGTTGAAGACCAAGACCACCAGGCCATCTTCATCTTTGTTGTTGGGCATTAAACTGTAACCCACAGCCTGC-AAATGAACAAACAAA ..x.....x.:x..:x:.:.-.:.x..x:..x.....:..........x:......:::..:..:..:..x.........................:..:......:.:.........x.:...:..:..:...........x....:.......:.......:..:..:.....:..x..............:..::.......xx....:.....:..x.....:-:.....xx...:... 20M1I206M1D15M 188/241 78.0% 242/94230402 0.0% 2/241 0.8% 33343734 NA +15870 chr4 + 190214555 76136175 76136174 76136414 240 ATTAATAATACCTTAAATCGGCAAAAGGGATTTTCTTGTGTGAATTCCACTGGCGGAATATTATTGTTGAAATACCCTTTTCCTGTTCCCCAAAAGGCCTGCAGTTGATTCCATTTTGCCAAAATAGCATCTCTCTCATCTCCCAACAGCGTTGGAGCAGAAAGAGCACTCGCAGTATTTATCAGCTGGTTGGACTGGGTAGGAGCTTGTGTAGGCTGACTGAAGAGACCA---CCTAATGCT chr4 - 94230402 42793508 42793507 42793750 51436653 51436652 51436895 243 ATAATTCATACCTTAAATCTGCAAAATGGGTTTTCCTGCGTGAACTCCACTGGAGCAATGTTATTGCTGAAGTACCCCTTCCCTGTTCCCCAGAAGGCCTGCAGCTGGTTCCATTTTGCCAAGATGGCATCTCTCTCATCTCCCAAGAGTGTCGGAGCTGAGAGAGCACTGGCAGTATTGATGAGCTGGTTTGACTGGGCAGGTGTCTGAGCAGGCTGGCTGAACAAACCGCCTCCTAATGCT ..x.x.x............x......x..:.....:..:.....:........x.x...:......:....:.....:..:...........:...........:..:..............:..:....................x..:..:.....x..:........x........x..x........x.......:...x.::..x.:......:.....x.:...:---......... 231M3I9M 200/240 83.3% 243/94230402 0.0% 3/240 1.2% 33342667 NA +15452 chr4 + 190214555 76144142 76144141 76144486 345 TACTTACTAGTTTGCTGCTGCTGCTGT------GTATTAAATCCTCCAAATCCCAGTCCAGTTCCCAAACCAGTACCTAAACCAGTACTAGTTCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCCTTTGAA------TGAAAAATTG----GAAC------------TTCGTAAGTTAAAAAAAAAAAAAAATC-----TGACCTCTACTTCATTTACTTCTATGAATGACTTAAGAT--GGCCTCTTACCAGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTGCAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACCTAATTAAAAAAG chr4 - 94230402 42794411 42794410 42794784 51435619 51435618 51435992 374 TACTTACAGGTctgctgctgctgctgctgctgGGTACCGAAGCCTCCAAAGCCTAACCCAGTTCCCAACCCAGTACCCAAGCCAGTACCAGTGCC------TGTCCCAAAACTAGTACCAAATCCAAAGCCTTTGTTCTGGGTAGCACCAAAGAGTCCTGGGAAAATAAGCAAAGAATTATTGAGAACAGGATAAAAGTACATGTGAGCTGCAAAACATTAATTATCATGAAGGGCTAATGCTACACTTCATTCTAAGAATACTTTCAGATTTGTGCTCTTACCGGTGGTGCCTGTATTGGTGGGAGCAGAAAAACTAAATGCTGGTGCTGCAGTGGTAGTGGTTGTCCCAAATCCTCCAAACGCACCTAATGAACAAAG .......x:..:..............:------...:::..x........x..:.::...........x........:..:.......:...x..------...x.......:...............:...........:...x..............xx...------::..:....:----....------------:x:..:..:.:x....x.xx..xx...-----x.:.:xx.:..x..:..xx.....x....:x:..x....--.xx........:..:........:..:..x..:........:..:.....x.:xx.......x....xx.....................x........x..x.... 27M6I62M6D63M6I10M4I4M12I27M5I39M2I107M 264/339 77.9% 374/94230402 0.0% 41/339 12.1% 33349731 NA +15981 chr4 + 190214555 76147425 76147424 76147664 240 ATTCTTGGACTCCAGCTCCCAACACTGGTTACACATACAACC-----CGCAGTATCTACCTGCACTTGCCAGACTGTTACCAAAATTGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAATTCCCAATATTAAAGTTCACTGCAGGATTAGCAGTTAATCCGAAACCCCCAAAATTAAACCCACTGGCGGTGGAGTTGGCAGTCTCAAGCCCACCAAATCCTGATAGGCGTGTAGGCAAAGAAA chr4 - 94230402 42796904 42796903 42797146 51433257 51433256 51433499 243 ATTCTTGGACCTCTGCTGTTAACATTTATTACAGA-ACAAGTATTTGTGCAATATCTACCTGCACTTGCCAGACTGTTACCAAAATTGAATGGTGGAGTTGAGGTAGTAGAAACACCGAAATTCCCAATATTAAAATTCACTGCGGGATTAGCAGCTAATCCGAAACCCCCAAAATTAAACCCACCGGCGGTGGAGTTTGTGGTTTCAAGCCCACCAAATCCTGACAAGCATG-AAGCAGAAAGA ..........::.x...x::....:.x:.....x.-....x:-----:...:......................................:..x.xx.::...................................:........:..........:.............................:............x.::..:....................:.:..:..-.:...:.:.:. 35M1D6M5I186M1D11M 203/238 85.3% 243/94230402 0.0% 7/238 2.9% 33350521 NA +3085 chr4 + 190214555 76158153 76158152 76158214 62 AAAAAAAGAAAAAACAAAAAACAAAAAAAACCAGTGCCTCTCCAATAGCTCTTGGATCCTAC chr4 - 94230402 77667894 77667893 77667955 16562448 16562447 16562509 62 AAAAAAAGAAAACACAAAAAACAAGAAGACCCACTGTTTTTTGAAAAGCATTTGGAAACTGC ............x...........:..:.x...x..::.:.:x..x...x:.....xx..:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -1509741 -92720661 +3090 chr4 + 190214555 76164788 76164787 76164830 43 TCTCAAAAAAAAAAAAAAAAGAAAAGAAAGCATTTTTTTTCAT chr4 - 94230402 56938622 56938621 56938664 37291739 37291738 37291781 43 TCTCAAAAAAAAAAAAAAAAGGAAATAAAGAATTTTCTTTAAT .....................:...x....x.....:...x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 19226166 NA +3831 chr4 + 190214555 76166244 76166243 76166317 74 ACTTACCTCATTGAGGTACATCACTGGGAAAACCATGGTTCTAATGTCTCCCGTTTCACTACAAAGACAAAGGA chr4 - 94230402 42801576 42801575 42801649 51428754 51428753 51428827 74 ATTTACCTCATTTATATACATCACTGGGAAAATTAGTGTTCGGATGTTGCCCGTTTCACTGCGTTAAAAAAAGA .:..........x.x:................::.xx....x:....:x...........:.:xx:.x...:.. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 33364668 NA +3023 chr4 + 190214555 76167648 76167647 76167697 50 TTTCCTTTCCTTTCCCTCCCTCCCTCCCCCCCCCCGCTTTTTTTTTTTTT chr4 - 94230402 53815609 53815608 53815658 40414745 40414744 40414794 50 TTTTCTTCCTCTCCCCTCCTTTCTTTCCCCCCCCCCTTTTTTTTTCCTTT ...:...:.::.:......:.:.:.:.........x:........::... 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 22352039 NA +4860 chr4 + 190214555 76168394 76168393 76168508 115 AAAACTTACACAAAGTCATCTAATTTTTTGACATAAATGTTGATTTGGAACCTCTTGGCTGCTTTTAGGATTATTCCAGTCAACTG-----CAAATCAGAGAAGTGAAAAGGAAACATTA chr4 - 94230402 42802999 42802998 42803118 51427285 51427284 51427404 120 AACACTTACAAGAACTCAGGTAATTTTCTGACATGAATATTGATCTGCATCCGCTTGGCTGCTTGCAGGACAAGCCCTGTCAGCTGGGGAATAAAATAAAGAAGTGaatttaaaataata ..x.......x:..x...xx.......:......:...:.....:..x.x..x...........x:....:x.x:..x....:...-----:...x:.:.........xxx:...:.x.. 86M5I29M 84/115 73.0% 120/94230402 0.0% 5/115 4.3% 33365395 NA +8402 chr4 + 190214555 76169850 76169849 76170008 159 AGGAAGTATGTACTCACAGGATTAATGTCCACAAATGTCTCATGGTCTTCCTGATTTGGGTGCATGCCTTCTATGGCAGAAACAAACCTCTCATCTGCTTGGTAAAAGTGTGGGAAAGACATAATGATGGGTGCACCTGCATTTGAAGGAAAACAGAAA chr4 - 94230402 42804423 42804422 42804580 51425823 51425822 51425980 158 AAAAAGGCTGTACTTACAGGATTGATATCCACAAATGTCTCATGGTATTCCTTTGTTGGGTGCATGCCCTCTATGTCACTTACAAACTTTTGATCTGCTTGGTAAAAATGTGGAGCTGACAGAAATATGGGAGCACCTGGA-ATGTAAAAACACAGAAA .::...xx......:........:..:...................x.....xxx.............:......x..xxx......:.:.x...............:.....::xx....x..xx.....x.......x.-x..x.::..x....... 141M1D17M 124/158 78.5% 158/94230402 0.0% 1/158 0.6% 33365427 NA +4640 chr4 + 190214555 76174102 76174101 76174265 164 CATTCTTGACACCCCTATC-ATGTCCCCTCTCTGAGTTCTTACCATTCTTGCAGATGCTGACATTCAGAACTCCTGAGCCCAGGCAGTTTCCCTCAGGTATACAGAAGCCGGCATTGTCTGACGTATTGGCTAATATTTCTGCAGG--AACTTTATACCGAAAGGCA chr4 - 94230402 42805067 42805066 42805226 51425177 51425176 51425336 160 CACTAATGTCTCTCCAATCTATTTCCACTGCCTGGTAATATACCTTGCTTGCAGATGCTGACATTGAGGACACCAGCACCAGGGCAGTTTCCTGGTGGTACACAGAATCCAGCGTTGTCTG-------GGTTAACAGTGGTGTTGGCAAACACCATAGGGGAGGGCA ..:.xx..x.x.:..x...-..x...x..x:...:xxx:x....x.x..................x..:..x..x.x:..x:..........:xxx....:......x..:..:.......-------..:...:.x.xx..:x..--...x::...xx.:.:.... 19M1I101M7D18M2I19M 108/157 68.8% 160/94230402 0.0% 10/157 6.4% 33369035 NA +4199 chr4 + 190214555 76175457 76175456 76175569 113 AATACTAACTCATTTGTCCTCATAACAACC-TCTAACATAGTTAACAATTTCTATCTTTGTTTTACAAATAAGGAAAGTGAGGTACAGAGTGGTTAAGTAATTTGCCCAAGGTC chr4 - 94230402 10729149 10729148 10729262 83501141 83501140 83501254 114 AACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.xx..:.x....:x.....:..:.x..-.x.:.x:...x...:x.:.x::.x..:::.......::.::.:...x.....:...x.xx..................::... 30M1I83M 76/113 67.3% 114/94230402 0.0% 1/113 0.9% 65446308 NA +7161 chr4 + 190214555 76175787 76175786 76175955 169 TTACCTGCAAAAGTCAGATGGGAAGACATAAAGGACCTCATCTTTGGTTATTAGTGGGTGAAAAGAATCTCCATCTGTTCCATTAATCATATTGCACTTGTCTGTTATCCACCAGTCAAGTGACCTATAATTGATAAGCACAAGAAAGAGTAAAGATGATCACATTTGA chr4 - 94230402 42806222 42806221 42806379 51424024 51424023 51424181 158 TTACCTGCAGAAATCAGAAGAAAATATATAAATGTTCTCATCTTTGCTAATCAGTGGATGAAAAGATGTCCCATCCGTTCCATTGATCATGTTACAAGTCTTTGTTGTCCACCAGTTCAATGACCT-----------GAAGAAAACGAAGCAAAGAGAATAAGGTTTAA .........:..:.....x.::..x.:.....x.x:..........x.x..:.....:........xx::.....:........:.....:..:..xx.x.:....:.........:x.:......-----------.x.x..:.x::..:.....x:..x.x:...:. 126M11D32M 115/158 72.8% 158/94230402 0.0% 11/158 7.0% 33369565 NA +6450 chr4 + 190214555 76176274 76176273 76176537 264 TACCACCATCTTGATTTGTAGAATAATAATTACAAGACTATTTACATGTTTTTATATTTTTCATCCAAAAAAGGCTAAAC---ACATTTTTAAGCAATGTAGAAGTA-GACATGTAG-----TTTAAATGAAAACTGAAAAAATAATTCCACTGATAAATCATTTGACTTACGTTTTCCCATTCCATTCCACAATTTTTGTAAAGTTAAGGTAACTGTCTTCTCCAGTTAGAAAAACATAGTCTCCATCATTAGTCCCATTTTTCTGAAAATA chr4 - 94230402 42806957 42806956 42807186 51423217 51423216 51423446 230 TACCACAATC---ATCCTCAGAATAAAA-------------TAACCTTTTTTTTTTTTTTTTTTGTAAAGAACATAAAGATGAACATTTTTGTTCA--TCAGAAGTATGAAAAGTGGCAAATTTTAACAGAGGCCTGAAAAA-------------------------CTTACTCTTTTCCTTTCCATTCCACAATTCTTGAGAAGTTAAGGTAGTTCATTTCTCCACTTAGGAAAACATATTCGCCATCATCAGTTCCATTCATCTGCAAACA ......x...---..::x:.......x.-------------.x..x.x.....x.x.....:x.x:...:..x::x..:x---........:xx..--x:.......-..x.x..:.-----.....xx..::x........-------------------------.....x:...:..x...............:...x:...........::.xx:.......x....:........x..x.......:...:.....:x....x...:. 10M3D15M13D39M3I13M2D9M1I9M5I20M25D106M 164/221 74.2% 230/94230402 0.0% 52/221 23.5% 33369317 NA +5334 chr4 + 190214555 76179471 76179470 76179709 239 CACTGTCAGCTAAAAA----AAGAGGTTCTGAAAAGAAAAATCTACTTACCTCATAGAATAGGCCAAAATAGGGAGAGATATCGGGCCTGAAAACATGGATAAGGGACAAGATTTCATCTTTGTAGCCCCAGAGCAATTCGTCAACTGTGTGAGTCACAAAGAGCTTCTGCTGATAGGCTTTCAACATGGCCTCGATGATCTCCCTGAGGAAGTGCACCTGGGACCACTCTATGACAGTCTGC chr4 - 94230402 42807881 42807880 42808116 51422287 51422286 51422522 236 CACTCCCAATTTAAAGCATCAGGAAGTCTTGTACAG-------TAGTTACCTTATTAAAGAAGCCAAACACTGGATCGATTTCAGGATGCAAAACATGAATGGTTGACAGGAGTTTGTCTTTGTAGCCCCACAGTAATTCATGCACTGTGCGAACTGTAAACAGGGATTCTTGGTATAGGAGCAATAGCACCTCCGTGGCAAACTGAAGAGAAGTTGCCCTGGTCCACTCCATTGCAGTCTAC ....x:..::.x...:----.:..:..::..x.x..-------..x......:..x:..x.:......xxxx...xx...x..:..x:xx........:..::xx....:..x..::..............x..:.....:.xx......:..:::::...x..xxx:.x:..:..x:xxxx...:.xx:....x:..::xxx.:x:..::.:xx::..:x..x......:..x:......:. 16M4I16M7D200M 140/232 60.3% 236/94230402 0.0% 11/232 4.7% 33371590 NA +3186 chr4 + 190214555 76185847 76185846 76185942 96 ACCCTGGTTTCATCTTACTCACTGCTTCTGTGCCTCAGTTTCCTCATCTGTAAAATGGAGGTAATAACGTACTCACCTTGTAGGGTTGTTGTGAGA chr4 - 94230402 11947222 11947221 11947315 82283088 82283087 82283181 94 ACCTTAGGTTAGTC--ACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATACAATGCTAACCTTGAAGGAACTTTGTGAAA ...:.:.x..x:..--...:.x.x:x:.....:.:........:...x.:.:.....:xx:.....xx:.:..x......x...:x:x......:. 14M2D80M 62/94 66.0% 94/94230402 0.0% 2/94 2.1% 64238625 NA +3043 chr4 + 190214555 76191726 76191725 76191801 76 TCTCTCTCTCTCCCCTCCCTCCCTCCCTCCCTCCCTGTCTTTCTTTCTTTCTTCTTTTTTTTTGAGACAGGGCCTT chr4 - 94230402 17623027 17623026 17623102 76607301 76607300 76607376 76 TCTCTTGCTCCAGACTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAGGTTT .....:x...:xxx..:...::...xx:..::.:.:x.....:...:.....x:...x........:...:.x:.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 58568699 NA +3031 chr4 + 190214555 76191734 76191733 76191792 59 TCTCCCCTCCCTCCCTCCCTCCCTCCCTGTCTTTCTTTCTTTCTTCTTTTTTTTTGAGA chr4 - 94230402 84759162 84759161 84759220 9471183 9471182 9471241 59 TTTCCCCTCCAACCCCCCCCCCCTCCCTCCCCATACCCTTTTTTTTTTTTTTTTTAAGA .:........xx...:...:........x:.:x.x::::...:..:.........:... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% -8567428 -85662974 +7002 chr4 + 190214555 76195702 76195701 76195880 179 CTTACCTGTAGGTGTATGGCCCCACTTCTTCCACCCGAGGGGTCTCCCCTCTGAGGATCTCCTCTGGATTGGTGACATTGAAGAAATAGAACTGAGTATACACAGGCAGAGGGGGCTTCTCCCAGGAGTCAAATGCCTCAGTACCATTCCTTAACACAATTTTCT-----AGGAAAAAACCAAA chr4 - 94230402 42812793 42812792 42812976 51417427 51417426 51417610 184 CCTACCGGTAGGTATATGGCCCTTTTTCCTCTACAAGAGGAGTAGCACCTTGAAGCACTTCTAGTGGATTTGTCACATTAAAAAAGTAAAACTGCATGTAGACTGGTGGAGGAGGATCTTCCCAAGCTTCAAAGGTTTCTGTGCCATTTTTTAATACTGTTCCCTGAAACAAGAGAAAGACAAA .:....x......:........:x:...:..:..xx....:..xx.x...:x:..x.::..:xx......x..x.....:..:..:..:.....x:.:..x..x..::....:..x.::.....:.xx.....x.::..x..:.....::....:..x:..::..-----.:..:...:x.... 165M5I14M 120/179 67.0% 184/94230402 0.0% 5/179 2.8% 33382909 NA +3531 chr4 + 190214555 76202337 76202336 76202410 74 CCACAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:...:..:xx:x..:.:.........:.x...x.xx.x........:..:.........:.:....x.::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 58005211 NA +3693 chr4 + 190214555 76213422 76213421 76213540 119 CTCACCTTCTCGATACTCTGGTCTACAGCCTTCTGGAAGACCCGGGCCACCAGCAGCGTGACGCTGGTCACCAGCAGGAGCAGGGACAACGTCCCCGCCGTGTAGAAGCAGCATCGGCC chr4 - 94230402 42819014 42819013 42819131 51411272 51411271 51411389 118 CTCACCTGCTTCACCTGCAGGTCCACCACCGTCTGGAAGACATGCGCCACCAACAAGGAGATGCTCGCGATAAGCAGCGTCAGAGCCAGGACCCCCACGGTGACGAGACA-CAGCGACC .......x..:x.:x:x.x....:..x:..x..........x:.x.......:..:x.x..:...x.:x.:x.....x:x...:.x..:x::....:.x...xx..::..-..x..:.. 110M1D8M 76/118 64.4% 118/94230402 0.0% 1/118 0.8% 33394408 NA +3035 chr4 + 190214555 76237329 76237328 76237388 60 CAGATGGTTGAGGGGCCTTAGAGTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTG chr4 - 94230402 80438006 80438005 80438065 13792338 13792337 13792397 60 CAGACAGAGATGGGGTCGGAGGACTTTTTGTGTTTCGTCTGTTTGTTTGTTTTTTTTTTG ....::.xx:x....:.xx..:::.....x.x...:..:..................... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% -4200677 -90029725 +3088 chr4 + 190214555 76252489 76252488 76252577 89 TGTTTGCCTGGTGACCTTAGGCAAGTTGGTTGCTCCTTCTGGGCTCACTTTCCTAACTATAAAATGGGGCAATAACTTAGGAATCAGCT chr4 - 94230402 80291623 80291622 80291711 13938692 13938691 13938780 89 TATTTCTGTTGTGACTCTAAATGAGCCATTTGATCTATCTGCATTTATTTCCTCGGCTATAAAATGGGACAATAACTCACAAGGGAGCT .:...x:x.x.....::..::::..:::x...x..:x....x::.:.:..:.::::............:........:.x:.:xx.... 89M 54/89 60.7% 89/94230402 0.0% 0/89 0.0% -4039134 -90191268 +15776 chr4 + 190214555 76309518 76309517 76310008 491 GACCACGAGGAGTGGGAAATGGTGCCTAGGCACTCATCTTGGGGGGATGTTGGTGTGGGTGGCAGTCTTAAGGCTCCAGTGTTAAACCTAAAC--CAGGGAATGGACAATGGAAGAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTGCATGGGAAAATGGAAAGGGTAGCAGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTCCAGGTCCATTATGTCACAAGCACTGATGTGCAATTCATTGCAGTAACTGGAGACCATGAGTGTCTTGGGAGATGGAACACTTACATCCCACTCCACTATAACAAGGATGGGTTCTGGTCTCATTCCATTTTCCTGCCTGCAGATACAGTGGTGGAGTGGAAGTTTGTGTTGGTAGAGAATGGGGGAGTTACCCGCTGGGAAGAATGCAGCAATAGATTCCTAGAAACTGGCCATGAGGATAAAGTGGTTCACGCATGGTGGGGGATTCACTGATTCAGTTT chr4 - 94230402 42840401 42840400 42840861 51389542 51389541 51390002 461 GACCATGAAGATTGGGAAGTTGTTTCTGAGCACCTGGACTGGGGGGAGGCCGGTCAGAATGGCAGCATGGAAG------------ACTCAAACAGCAAAGAATGGGAACAAGGAGAC-TGCTCTGATGG-------------------GGACTTGAAAGCAAAGAGAGTTGCAGCGGTGCCCCCAATGTTTCAAAACATCCACGTGACTTTTCGTGTGCACTACATCACACACTCTGGTGCTCAGCTGATTGGTGTTACCGGTGACCATGAGTGTCTAGGCCAGTGGCACAGTTACGTTCCCCTCAAGTATGACAAGGATGGCTTCTGGTCTGAGTCTGTTACCTTGCCGGTGGACACCAAAGTAGAGTGGAAATTTATCTTGGTGGAGAACGGGAAGGTCACACGTTGGGAAGAATGCAGTAATAGAACCCTAGTGACTGAACATGAAGATCAAATCGCTCATCAGTGGTGGGGATACCACTGACTGGATTT .....:..:..x......:.x..x:..::....:::xx:........x.::...xx.::......:x.x:.:.------------..::....--..::......:x.xx:.:...x-::..:..:...-------------------.x.:xx....::::.:..:..x....:.:....:x..:x..:...:x.x:.:x::..x.xx..:.:x..x..:..::.....x:.x...:..:x..::.x....xx..x..:..x..............x..xx::...x...x....:.:..x...x.x...:..........x.........x.x..::..x:.:....x.::..:..x:x:..:........:...:.x.....:.....:...:::..:..x..:..............:......x:.....x:....:x.....:...x..:.x.:...:xx:........:xx:......:.x::... 73M12D8M2I22M1D11M19D345M 302/459 65.8% 461/94230402 0.0% 34/459 7.4% 33469117 NA +3017 chr4 + 190214555 76319449 76319448 76319487 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 6881710 NA +3241 chr4 + 190214555 76341653 76341652 76341734 82 AATCTAAAATGCTCCTATATCAAACTATCAGTTACATATATGTGTATATGTATGTATATGTGTATGTGTGTACACACACAAA chr4 - 94230402 21283712 21283711 21283793 72946610 72946609 72946691 82 AATCCAAAATATTTTAAAATCAAATGAATACTTCCAAACATACATATATGCATGTGTGTATGTACATGAATACACTAACAAA ....:.....::.::x.x......:x.x:.x..x..x.:..:::......:....:.:.:....::..x:.....xx..... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 55057941 NA +3060 chr4 + 190214555 76354228 76354227 76354278 51 AAAGGCAAAAAAAAAAAAAAAAAAAAAAAGGAGAAAGAAAAAAGTGAATTC chr4 - 94230402 79690416 79690415 79690466 14539937 14539936 14539987 51 AGGGGAAAAAAAAAAAAAAACTGAGAGAAGGAGAAAGTATAAAGTGAATTC .::..x..............xx:.:.:..........x.x........... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -3336188 -90894214 +3281 chr4 + 190214555 76354232 76354231 76354330 99 GCAAAAAAAAAAAAAAAAAAAAAAAGGAGAAAGAAAAAAGTGAATTCAGGATAAGAGAAAGGAAGGGAAGAAAAAA----TTGGAAAGAAGAAATAAGTCTAT chr4 - 94230402 21758986 21758985 21759088 72471315 72471314 72471417 103 GCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAACGTTTCAGTGAAAAGTAATAGGGTTAT ..x..:........:....:.........:....x...x:x...x:.x:..x:.:.:xxx.x...:...:...x..----.::.x:.:...x....:.x:... 76M4I23M 66/99 66.7% 103/94230402 0.0% 4/99 4.0% 54595246 NA +6926 chr4 + 190214555 76362123 76362122 76362378 256 TACCTGAAAGATTGTTTAATTCACTCCTACTTGTTTTCACCTCATTTAATAATTGATCTCTCTCTTGTTTGATGTCCTTCACTGCACGGAGCCGCTCAGAGCCTGCATTCACCAGCTTCACCTTTTCCAGCTCCAAGTCACTCACTCTGGCCTCAAGCTCCCGGATCTTTGCATCTTTTTTATCTTTTAATATCTAAATATATGGATAAATACAAAGGATAGAGAAGTAAAAAATATGTACATGTATAGTTATAAT chr4 - 94230402 42855631 42855630 42855864 51374539 51374538 51374772 234 TACCTGCAAGGACAGCTAGCACACTTTGACTGGCTTTCAGCTCATTCATTAATTGGTCGTTTTCCAGTTTCATAGCATTAACTGCATGGAATCTCTCAGTGCATG--TTTATCAGCTTAACTTCATCCAGTTCCAGCTTGCTCAGTGTGGCCTCCATTTGATGTATTCTCAATTCTTTCTCCTGCTTTACAATGTACTTATAT-------------------AAAAATAAAAAAC-TGTAAatatatatatataat ......x...:x::x:..::x....::x...x.:.....x......:.x......:..x:.:..:x....x..:x.x..x......:...::.x.....x..x..--..:.:......x..:.:x.....:....:x.::....x.x.......x.x:.xx:.x..::.::xx.....:.:x.x:....xx..x..xx.....-------------------.:..:.......:-....x..:....xx...... 105M2D96M19D13M1D20M 156/234 66.7% 234/94230402 0.0% 22/234 9.4% 33506492 NA +6963 chr4 + 190214555 76401253 76401252 76401365 113 GGTGAATGTTCCCAAACACCCATCAGACTTTCTATAAAAAGTGTGGCAAGCACCAACTCCACAAAGTGACACAGTACAAGAAGGGCAAGGATTCTCTGTATGCCCAGAGAAAG chr4 - 94230402 92221722 92221721 92221833 2008570 2008569 2008681 112 GGTGAACGT-CCCGAAAACCCGCCGGACTTACTGCAAGAAGTGCGGCAAGCACCAGCCCCACAAAGTCACCCAGTACAAGAAGGGCAAGGACTCTCTCCATGCCCAAGGTGAG ......:..-...:..x....::.:.....x..::..:.....:...........:.:.........x..x....................:.....x:.......::.x:.. 9M1D103M 90/112 80.4% 112/94230402 0.0% 1/112 0.9% -15820469 -78409933 +3147 chr4 + 190214555 76401361 76401360 76401428 68 GAAAGCAGCATGATGACAGGAAGCAGAGTGGCTATGGTAGGCAGACTAAGTCAATTTTCTGGAAAAAG chr4 - 94230402 92222050 92222049 92222117 2008286 2008285 2008353 68 GGAAGAGGCGCTACACGAGGAAGCAGAGCGGCTATGGCGGCCAGACGAAGCCTATCTTCCGTAAGAAG .:...x:..::x.::xx...........:........::.x.....x...:.x..:...:.x..:... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% -15820689 -78409713 +6455 chr4 + 190214555 76401426 76401425 76401547 122 AAGACTAAAACGATCAAGATTGTGCTGAGGCCTTGAGTGCATTGAACCCAGCTGCAGATCTAAGAGAACGCTGGCAACTAAGAGAAGCAAGC-CCTTGAACTGGCTTGAGATATGAAGAGAAA chr4 - 94230402 92222922 92222921 92223040 2007363 2007362 2007481 119 AAGACCACAAAGA---AGATTGTGCTGAGGC-TGGAGTGTGTGGAGCCCAACTGCAGGTCCAAGAGGATGCTGGCAATTAAGAGATGCAAGCACTTTGAACTGGGAGGAGACAAGAAGAGAAA .....:.x..x..---...............-.x.....::.x..:....:......:..:.....:.:........:.......x......-.:.........xxx....:.x......... 13M3D15M1D60M1I30M 97/118 82.2% 119/94230402 0.0% 5/118 4.2% -15821496 -78408906 +3438 chr4 + 190214555 76430132 76430131 76430210 79 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCTTCAGCCTCTCGAGTAGCTGGGACTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.::........:.x...x:xx.x:.......:..:.........:......--.:........ 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 58233006 NA +15255 chr4 + 190214555 76435146 76435145 76436238 1093 CTGAATTCTGCATGGCAGTGCTTACTGTGCAGAAAGGTT--GCAATGCCTCACTTTGCCTTAATCCATGTTCCTCTAACTTCCTTACTCTTTCTCTCAAGAGGAGGCA-------------------AGTGGCTGTGGCGGCCGCAGCAGTGGCTGATCATCACTGAAAATACC---AAAGAAAAGAACTGAGCTGCCTCCTTCATATTTTTTCCATTGAGGATTAATTTACCGTGCTTTTTCATTTTCTCT-----ACATCCTGCAAAAGTTTTTTTCTCTCCTAAGAAACAAACTATGAACTGATTGTTGAAAAAAAGAAG------TAAAAAGTTTTAG------------------------CACAGCTTCTCTGTCTCTTCGGGACAAGTTAGAAAATTCTGAAGTGAGCCGA-------------AGCAT-------AGTAAGTGCTTTCTTTCTTTTTAAGCTACTTCTGGG--GAGG-GAGGAGGCTATTGTAATGGTAAATTTCACTCCGAGAGGAAGAAAGGGTTGATAATCAATCAAAAATGAGGTATTCCTTTGAGTATTTGTGATTTTCTTAC----------TATAT-TGTAAGATGCTTTTAATTTTCTCTG-------------TAAAATAGGCAGAAATGGTTTTAGTGTGTGTATGTGTGAAATAAAAGCTCAGAAAA--GCAATCTTCAGAGCGCCACTGAAGGAAGTTTTGACGAACGGAGTAGAGATGTATACCACTTGGGGGCTTCAGTGAGAACCCAGAATTCCTGGAGGAGGATTTACATTCAGAAATGTTGAAGTGAAAATTCCTTCTGGTTCAGCATCTTGGAGTTCAGCTTGGAAGAACATTTTACGTATGGAAGAATTTGCTTCTCCAAACCTCTCTTTTGGCCATTGTGTGTCCTGAAGGATGGGACAACTTGTGCTGTA-------GAAGCACTGCTTGCC------------TGAGTTTGCTTCAGGCA-TTTTAAATTTAACTTGAGGGATCATGTGTTTGGCATGATGAGGACCACTGAAGACTTCCACAAGCCTAGTGCCACATTAAACTCTAA------CACGGCCACCAAGGGAAGGTACATTTATCTGGAGGCATTCCTGGAGGGAGGAGCTCCCTGGGGTTTTACTCTAAAGGGTGGCCTGGAGCACGGAGAACCATTAATCATCTCTAAGGTATGTTTCTTTTTCCAA chr4 - 94230402 42864701 42864700 42865837 51364566 51364565 51365702 1137 CTGCATTTTAGTGTGCAATGCTTGATGTGCACAATTGGTCAGTACTGCTTTTCTT-GCCTTAATCCAtctctctctctctctctctctctctctctctctctcgctcacttcctcgccctctctcATAGCAGCAGTAGCTGCAGTAGCTTTGGCAGATCATCGGAGAGAGCGCAGAGAATGAAAAGAGCTCGGCTATCTTCTTAACGCTTTTCCCA--AAGGATTAACTGCACCTACTTCTCCTGTTTTGCTGATAGACTTCTTGTA------TCTTTTTATTCCAATATA-----TGTGGA---GTTATTTCACATTTGAAACCCCTCTAAATAGTTTTTGGAATGGACTTTTTCTCTTATTTTCCCCAAGCATTTTTTTTTTTTTTGACAAGTCAGAAAATTGTGTGGTAAGCGGACAAAGTAACTGAGAGCGTGAGAGGGAGAAGACGCTTCCATTCTTTTAGTGCAG----TGGGCTGAGGCAAAAAGGCCATTGTAATGGTAAATGGCACGCAGAAAGGAAGAAAAGACTGATAATCAATCACAAATGAAGCATTCGTTTGGATTTTGGCAATTTGCTGGCCAATGGCTTTTAAATGTGTAAG----CTTTATTTTTCTTTTGTTGCCCACATACTGAAAAACTCAAATTTGAT---AGACCGAGAACGGG-AAGATAAATCTTTACAAAACTGTCATGCTCAGAATACCT-----GGAAATG--GGCAAA--GCGCAGTGCTGAA------------ACAGCAGT-AGAAAGTGGCAGTTCCAAAGGAGAAACAGCATTCAGAAATGTTGGTG-GGAAACATTTTTTAACCCATCACCTCAGACTCCAGCTCTGAAGATCATTTTTC-CATCGCAGA---TGCTTCT-----------------------TGTTTCACGTGTTTGGGGATGACTTGTGGTGGGCTTCTGGGGAGTTTAATTTGCCACTTTATTATTCCATGACTGCCAGAGTCAGTTTTATGTCTGACT-----GAGTATGTGACTGAACAGATGAGGATGTTGGACAATATTAACA---CCAG---CATATCATCTTCGGAGAGCGGCATAACCCACAGGGGAAGATATATCTACCTGGAGGCGCTGCTTCAAGGAGGCGCTCCATGGGGATTCACACTGAAGGGCGGACTGGAGAACGGGGAGCCATTAATCATCTCAAAGGTATGTTTTCTATTTTAA ...x...:.:xxxx...:.....:x......x..xx.x.--.:.x...:.:x...-............x.::....xx..::..:x....:......xxxxxx:xx..-------------------..::..x..:..x..x.:...xx....x.......:xx..:.:::.x---..x.......:..x:...::..:...x.:::....:...--:........:.xxx.x.:...:.:.xx...:x..-----..x..:..:.------.:...:.x.:.:..x.x.-----.:..:.---:..:..xx.x.xxx...:------....x......x.------------------------.x..:x:x:.:.x.:.:..:xx.......:........x..x:..:...x..-------------...:.-------..x.:::....:.x.......x:x..x:----....--....-:.::....:...............xx...x.x..:.........:.::.............x......:.:....x....::.x..x.::....x..x:.----------..x..-......----:....x......:.x-------------.:...x.xx..:.xx..:.---..xx:.x.x.:.x.-:.:.....xx:.:.x....--.:x..x:.....:::..x-----....:.x--.:.:..--.x.:..x.x..x.------------:.xx....-....xx::.x.x.:.:::.....:.x:x:...............:x.-.:...:x::..:.::::..x..:..::..x.:.....:x.....x......x.-:..x.x...---.......-----------------------...x..x:.x:xxxx....::.......x..x:-------.:..:x:x::.....------------::x.x:...:xx..x..-.....x:.:.:...-----..x:.....x:..:xxx........:xx:x..x:.:x.:x...---.:..---..:..:.xx:..x:.------..:::..xx..:......:..:..:..:........::.x..xx.:.....x.....x.....x..:..x..:.....:..x......x....:..:..............x...........::.x..::.. 39M2I14M1D52M19I47M3I39M2D34M5I10M6D18M5D6M3D18M6I13M24I52M13I5M7I28M4D4M2I4M1I100M10I5M1I6M4D15M13I19M3D14M1D19M2I18M5D7M2D6M2D13M12D8M1D47M1D53M1D9M3D7M23D33M7I15M12I17M1I14M5D43M3D4M3D15M6I133M 662/1003 66.0% 1137/94230402 0.0% 224/1003 22.3% 33570445 NA +5521 chr4 + 190214555 76443369 76443368 76443640 272 CTCATTTTAGTGAGCCCACAGTGTGATTGGAGAGGCATAATGAGAGACTTTCTATCAATTTTTGAAAAAACAAAACCTCAAAGGACATGCTGGATCTTAACTAATCCATAGACAGACTCT--TCCACATCTCTCCCTTTGATGTAGTTCCAAACAGTG-AACATCTTATCCAAAGGGCTGCAGTGCAGAGTCCTTGTTCTCCCACTTGGTTCATCCCAGGAGTCCA---TCCATCTCTTGTGCTCTGACATCCCAGGCACTTCTCAATGAAACAAAAT chr4 - 94230402 42870680 42870679 42870946 51359457 51359456 51359723 267 CTTTCTTCAGTGAACTCAGAGCAT--CTAGTGACAACTAATGAGAATCATTCCACCAGTCTT-GACAAGACAAAACCCCAAAGACCATTCTGGGTTTTATCTGGCCTATTGATGGACACTTATCCCTGTCTCTGCTTCTGGTCTGACTCCAAACTCTGTAGCACTTTCATCAAAACACT----CACAGGATCAGCACTTTCCCATTAGGGTAGTCCCGTGAGCCAACTGCTCACCCCATG----CAAATGCCCAGGGCCCCTATAGACAAAATGAAAT ..:x:..:.....:.:..x..::.--:.:.x..x:xx........:x.x...:.:..:.:..-..x..:........:.....:x...x....:.:...x..:::.:..x..::...x..--...x::.....x.:.:..:.x.:::.......xx..-.:..::..xx:....:x:..----::...::..xx:::.:.....:.x..x.x:....:x...:.x.---::..:.:.x..----.x:.:::..x:...x.:.x.x:.::...::.... 24M2D36M1D57M2I36M1I20M4D43M3I11M4D34M 159/261 60.9% 267/94230402 0.0% 17/261 6.5% 33572689 NA +3062 chr4 + 190214555 76444467 76444466 76444515 49 CTCATCTCTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 72884655 72884654 72884703 21345700 21345699 21345748 49 CTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGA ..::..:.....:...............:.........:.xx.x..:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 3559812 NA +13318 chr4 + 190214555 76447412 76447411 76447954 543 CTTGCATGTGTCCTCTGAGAGGTTCACATTTTTGAGGCCTTGTCTCATGGAAACTGGGAAATGAGCTTCTGGAATTCAGACCCAG-GATCTGGCTGCATTCCAGAAATAAATATA----------CATGTTGGGCGTTGAGATAGACAATTAAAAGAATAGGAGAGTGTGCAAACTTTTGAGAATGAGAAGGC----------AGAAAATAGACTCTTTTCTCTCATGCT---------TTGCTTTTGCTTTTGTTTATTTTTTATATTTTTACTTTTGAGTATCAGCTAGTG----------AGTAGCAGGGCAAAAACAAGGCAGCCATTGATCTAAGTGTAAGGCAGCAGGAGGAAGGTTAAGAGAATGAGTGTTATTCTTTAGGACTACATTCATAGTTGCATGGTGTTGCTCTTGGCTCAAAGTCTACAATTAAATCAGTTGTTGGCAC---TCCCTTGAAAGCATTACTATCACAGTTTCCCCTACATATGTAAGTCAATAAATTTG--ACCTTTAAGAAGGACAGTTGGTGTAGACCCCCTCCACTGGGCCAACACATATTGCAAATTTCTGAACTCAGGC chr4 - 94230402 42876637 42876636 42877209 51353194 51353193 51353766 573 CTTGTCAGTGGACTGAGAGAGAGCCACATTTCTCAAATTCAGTCTCATAGAAACTGGGGAATGAGCTGATGGAATTCAGACCAAAAGATCTGGCTGTTTTCCAGGAGCAGATATATGGAAGAACACATTTCTAGTTTCAAGAGAGACAGTTGAAACAGAGAAAGAAGTGAGAAACATTTG-GACAGAGAGGGTTGGTGTCGTGGGGAGAGATCTTCATTTTATCAATGATCCCCCGTTCTCCCTCCTGCCCTGCTTCATTTC----GTCTTAGCCTAAAAGCAGTTGCCAGTGTTGACTGAATAGTGTCACCACAGAAGGGATACAGCCACTGACCTGACTATAAGGCAACAG-CGAAAGGTTAGAAGAATTAGTCTTGTACCATAGACTTGTATTAATAGTTGTATTGTGGTGTTGTTGGCACAAACTCTGCAATTAAATAAGTTGTTGGCACTCTTCCCTAGGTTAAATTACTACTACTGTTCCCCTTGC--TTGCAAGTCAATGAATACAACACTTTTGGGGAGGCAAGTTCAAACATTTTTGTTCTTCTGGG-------ACTCTGCTCATTTCTGATTTCAAGC ....:xx...xx..xx.....:x:.......:.x.:::::x.......:.........:........xx.............x.:-..........:x......:.::.:.....----------...x.:x:.:x.::...x.....:..:...x.:x:::...:xxx:x....x....-..xx....:..:----------:.:.:.x.xx:..x...:x::x...x.---------.:x..::...::.xx..:....:----:.:..x:.:.xx:..:.x:x..:....----------...:x..xx:..:..:x:.x:......:...:..:.x.:.......:...-x.:.......::.....x...x..:.x.:x...:x:.::...x.......:..x...x..:.x.....x....x...:.........x............---.....x.:xx:x.......::..x...:...:.:.--x..:........:...x::--..:...::.:...xx....x:x::.xx:::x:..:x.....-------.:x:...xx........x:...:.. 85M1I29M10I55M1D12M10I27M9I23M4D27M10I50M1D100M3I35M2D19M2I41M7D25M 345/528 65.3% 573/94230402 0.0% 60/528 11.4% 33570775 NA +7862 chr4 + 190214555 76466139 76466138 76466402 264 CTCAACAGGCTTCTTGAAAAATATTTTTTTCATCTTTCAAGAATCAGCTAAAATTGAATTTGGCATTGTTTGCCCTTTGTTGCCTAGGCATTGGGGTCAGA-CTCTTGTCTGACCTAAGTGAAGCCATGATGGACAGTTCTGTAGAGGGCATTATCACAGCCTAATCAGATAAACTGAAAGCAAAATTGTTTTTCTCTCTCCCACAGAATCTGCTCCTCCATTTTCTTC--CTCTTTTATAT------TCTTTTCTAACTTGCCCTGTGAATT chr4 - 94230402 42879389 42879388 42879645 51350758 51350757 51351014 257 CTCAACAGGCAACTCTGAGA--------TCCTTCTGGCAAGA-TCAACTGAAGCTGCATTCATCATTGTTTGGCCTGTGTCACCCAGCTGGTCGGGTCAGAGAGCTTCTCTGACCTGAGCCCACAAGTGATGGACAGGTCTGTAGAGGGCATTATCACAACATAATCACATGGATTGAAAGGAAAGCCATGTGCCTTTCTT------AACTTTTTTCCCCCTGTTCTCCGAATCTTTTGGATAATGCATCTTTTCTTATTT-TCCTCTGAATT ..........xx..:x:.:.--------.:.x...xx.....-...:..:..::..x...::x.........x...x...::..:..x::x.x........-xx...x........:..:xx.xxx:..........x.....................:.x......x..::.:......x...::::.x.x:..:...:------..::.x:.:.:..x.x....:.--x......:x..------........x.:..-:...x...... 20M8D14M1D58M1I99M6D22M2I11M6I13M1D11M 176/248 71.0% 257/94230402 0.0% 25/248 10.1% 33586750 NA +3532 chr4 + 190214555 76471319 76471318 76471392 74 CTACAACCTTTGCCTCCCGACTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:..:xx:x..:.:.:x........x...x.xx.x........::::.........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 58274193 NA +3283 chr4 + 190214555 76510415 76510414 76510488 74 TAGCTGAATGACTTTGGGCAAGTTACTTAACCTCTCTAAGCCTCAATTTCCTTAAATATAAGATGGTGGTAATA chr4 - 94230402 11947212 11947211 11947285 82283118 82283117 82283191 74 TAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA ..:...x:....:..:..:x...:......:..x:..:x.:.:..:.....::.x:...:.:...:.x:..... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 64563203 NA +3210 chr4 + 190214555 76513373 76513372 76513460 88 GCATGATATTGGCTCACTGCAACCTCTGCCTCCCAGGTTTAAGTGATTCTCATGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197116 18197115 18197197 76033206 76033205 76033287 82 GCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ....x..:..------..:..:..:xx:x..:.::....:.....x...x..x.x........::.:x........:......x.::. 10M6D72M 57/82 69.5% 82/94230402 0.0% 6/82 7.3% 58316257 NA +3207 chr4 + 190214555 76520444 76520443 76520530 87 AATCTCATAAAAATCCTAGAAGGTA-----------TTATCCCCATTTTACAGATAAGGAAACTGAGGCCCAGAAAGGTTGCATAATGTGGCTCAGAG chr4 - 94230402 10729164 10729163 10729260 83501143 83501142 83501239 97 AGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAAT-TTGCCCAGAG .::....:..x.x:...:x:.....-----------.:.x.:...........:.::.:..........x..x.x.....:x:....-.x..:..... 25M11I51M1D10M 62/86 72.1% 97/94230402 0.0% 12/86 14.0% 65791280 NA +3366 chr4 + 190214555 76521267 76521266 76521322 56 CCTGTGTGTATGTATATGTGTGTGTGTGCGCACATATGTGTGTGTGTGCACACATG chr4 - 94230402 70982627 70982626 70982682 23247721 23247720 23247776 56 CTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG .:.......:.....:.....:::.:..:x..:.x.........::.:........ 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 5538640 NA +3195 chr4 + 190214555 76539923 76539922 76540005 83 CTGCAACTTCCATCTTCCGGGTTCAAGCCATTCTTCTGCCTCAGCCTTCCAAGTAGCTGGTATTACAGGGGTGCGGCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:.::xx.x....:.........:xx...x:xx.x.........:...........x.:....--x....:x...::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 58342797 NA +11043 chr4 + 190214555 76555592 76555591 76555797 206 TCTCTCCCTCCAAGCAGGTCGAAGAAGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCCAGAAAGGAGGCAGTTTCCCTGGTGAAAGGATCCTACAAGACCCTCAGGCTGGTAGTGCGCAGGTAGGTGGCA---GACCCCCACCCTGTCCCTCCTACC chr4 - 94230402 42907533 42907532 42907738 51322665 51322664 51322870 206 TCTTTCCTTT---GCAGATTGAAGAGGGAGGTAAAGCAGACTCCCTGCCTTCTAAGCTGCAGGCTGGCGACGAGGTGGTGAACATCAATGAGGTGCAACTGAGCAGCTCCAGGAGAGAGGCCATTTCCCTAGTTAAAGGGTCCTACAAGAAACTCAAGCTAGTCGTTCGCAGGTAGGCAAGATACAACACTCCCTCTCCCCCTCCTACC ...:...:.:---....:.:.....:..:..:.........x.....xx:..:..:...........x..:.....x...x..............xxx..............:.::.....x:.......:..x.....:..........xx....:...:..x..x..........:::x.---:..x.:.x.:..x:.......... 10M3D169M3I24M 157/203 77.3% 206/94230402 0.0% 6/203 3.0% 33648059 NA +3159 chr4 + 190214555 76557103 76557102 76557242 140 ATATCCTCATCTTTAAATGAGGATTTAAATATATGTATTTATGCCAA-----AATATGGCAACAATCTAAGTATCCATGGAGGGACAAACCAAA-----------------GAAAATGTG-GTGTATATATGTATATGTTTATGTATACACACACACACACAC chr4 - 94230402 88147070 88147069 88147230 6083173 6083172 6083333 161 ATATTCTGATTCCCTAGAGAGGATGTGCAAATCCATATTCATGGCAGGGGGTAGAATTAAAACCAGCCAAATAGATGTAAAAGGACA--CTAAACCTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ....:..x..::::x.:x......x.:x.x..x::....:...x..:-----.:x..x:x...x.x.:..:..xx::.::.:.....--.:...-----------------xx.x....:-.x:.......:.........:.....:.:............. 47M5I35M2D5M17I9M1I42M 92/138 66.7% 161/94230402 0.0% 25/138 18.1% -11589967 -82640435 +3149 chr4 + 190214555 76557196 76557195 76557261 66 ATGTG-GTGTATATATGTATATGTTTATGTATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....-.::..x.:......x.::x.......:.x:...:xx.:.................x..... 5M1I61M 50/66 75.8% 67/94230402 0.0% 1/66 1.5% 68161400 NA +3189 chr4 + 190214555 76557201 76557200 76557256 56 GTGTATATATGTATATGTTTATGTATACACACACACACACACACACACACACACAC chr4 - 94230402 14964829 14964828 14964884 79265519 79265518 79265574 56 GTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:::.:..:.:.:..x........:...xx........::............. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 61592372 NA +3594 chr4 + 190214555 76565560 76565559 76565631 72 ACAGCCTTGACCTTCTGGGATCAAGTGATCCTCCTACTTCAGCCTCCGGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197128 18197127 18197199 76033204 76033203 76033275 72 ACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......:x:.x........x.......x.:.x.xx:x:.......::x:.........:......x...... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 58368432 NA +6728 chr4 + 190214555 76590355 76590354 76590633 279 GGCTGGCCTGCA--------TTGCCTCCGAAGGTATTTCAGGAATGTTAATGGTATGCCTGAGTGGA-GGCCGCAGAGCTCCGAGCTCAGGCCTGAGAACTGTTCTTGTGGCCATCTGTTGTGGCCCAGGAAGTCTCATAGCAACAGCTTCTCAAGAATGGTGCTTTTTTTTTTTTTTTTAATTA--AAATTAACTCACACAAAACCAAAAAACTGCTCCACTGCT----------------CAAGAAGAATCAGG-ACAGCATTCAGATTTTTTCTACACAGTGATGAGTTTTTAAGGAAGAAAAG chr4 - 94230402 42923438 42923437 42923724 51306679 51306678 51306965 287 GGCTGCCCTGCACCAGGCTGTGGGGCCCGGAGGTATGTGGGGAATGCGAATGGCATGCTTGAGTGGACAGCTTCAGAGCG--------AGGCGCGGGGATGGCTCTCACTGCCATCTGTTGTGAGCCCCGCAGGCCCTTGGCAACCGCGTCTCAGGAATGGGGCTGCTATTTTTTTTTTCCATAAAGAAATTCTTCCTCGC------------CCTCTTCCTTGCTCCTGCATACGCAGACGCATGAATAAGCGGGAATGGGGCTGGGATTCCTGCTACAGAGCAATGCGTGTTAAAGGAGAAAAGG .....x......--------.x.xx:...:......x.x:......:x.....:....:........-:..:x......x--------....x:.:.:.:x.:...:::x.............:x..xx.x..x.:.x.:.....x..x.....:......x...x:.x..........:x..x.--.....xx::.x.:.------------.:x..:.x:....----------------..x...x..x.:..-.::.x::.x:....::.x.....x..::...x..x..x.....::...:. 12M8I47M1I12M8D97M2I14M12D13M16I14M1I50M 178/259 68.7% 287/94230402 0.0% 48/259 18.5% 33666917 NA +3100 chr4 + 190214555 76605914 76605913 76605990 77 TCTCTCTCTCTCTCTCTCTCTATATATATATATACACATATATATATACATATATATACACATATACACACACACAC chr4 - 94230402 80495418 80495417 80495494 13734909 13734908 13734985 77 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ..:..:.x...:......x.:.......:.:.x...x....::.:.:...:x:.xxx::...x.:......:.x... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% -3889504 -90340898 +3393 chr4 + 190214555 76605968 76605967 76606022 55 TATACACATATACACACACACACATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 33661790 33661789 33661844 60568559 60568558 60568613 55 TATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT ..........:.........x.x........:....xx:.:.x.....:...... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 42944178 NA +3068 chr4 + 190214555 76605970 76605969 76606024 55 TACACATATACACACACACACATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 33661790 33661789 33661844 60568559 60568558 60568613 55 TATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT ..:...:.............x.x........:....xx:x:.x.....:...... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 42944180 NA +8204 chr4 + 190214555 76607307 76607306 76607487 181 TATTCACTCCCACACTCT------GAGGAATTTATGACCAGTAAGTTGCTCTCTAATGAGTACAGAACAAGAGCATTGCATCTTCTCTTAATTAGTTTGACAGATATTCATTTAAATTTGAAAAGATTCCCAGACGTGGGATAGCAAAGGAAAGTCTTGAATTCC--TTTTGCATCTTAATTCTGTTTT chr4 - 94230402 42927323 42927322 42927510 51302893 51302892 51303080 188 TGTTCACACATACACGCTCCGTCAGAGGAATTTATGGCCATTACGATGTTCTCTAATGAGTACAAAATGAGACCGTTACATCTTCACTTAATTAGTTTGACAGATTTTCATTTAAATATAAAAAGACTTCTAGGCTATAGGGAACAAAAGGAAGGCTTTCTTTCCAGTGCGGTAT-TTGACTCTGCTTT .:.....x.x:....x..------............:...x..x.x..:...............:..::...x.:..:.......x...................x...........x.:......:.:.:..:.xxx:.:x.:....:.:...x...xxx....--.x:x.:..-..:.:....:... 18M6I141M2I8M1D13M 136/180 75.6% 188/94230402 0.0% 9/180 5.0% 33679984 NA +3062 chr4 + 190214555 76620066 76620065 76620119 54 ATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAAAAGAAACAATAGGA chr4 - 94230402 37391716 37391715 37391769 56838634 56838633 56838687 54 ATCTCAAAAAAAAAAAAAAAAAAAGGGAATTTAATAGGGAAAGAGACAATATGA ........................:::.:xxx..x..::.....:......x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 39228350 NA +12468 chr4 + 190214555 76624262 76624261 76624594 333 GCCAC--ATCTGTGATCACTGTCTTGTGCTTGCCAATAGAGGTTTTCTTCTGGATGCTGTGTCTGCTCTTGGTCTTGTGGCTTTAACACCGAAGAGCTGTTGTCTACAAAAGACAGTACATTAGAGCTCCAGAGTTCACTCAGCTGCCTGCTTTGCTCCCGTGGTGACTTCATTCTTGGGAAGTTTTTAGGTTTCCTGGGAGATGAAGCATGAGCAACATTTGCTCCAGCCTGAGTAATTTCAGAAGGCCTTGAGTCCTGTTTTGTTATTCGGGTTTCCAAGGGTGGGTGA-GGGGCATGAGAATT-CCCAGCAGTTACCACTACACGTGAATACTG chr4 - 94230402 42938793 42938792 42939109 51291294 51291293 51291610 317 GCCACCTGTTTGTAACTAGTGTCCTGCAGGTTCTCAGGGCTGCTTTCTGCTCCA--CTCTCTCTGCCCTTGGTCCTATTGCTTTGACACTGAGGCCTTGTTGTCTGCGAGAGACGGCACGCTGCAGCTCCCTGGCTCGCCC------------TGCTCCCGTA---ACTTCATTCTTAGAAAGTTTCTGAGTTTCCCGGGTGATAAAACGTGTGCAACATTTGCTCTGACCTGAATCATTTCTGAAGGCATTCAACCCTGTTTTGTTATGAAGGTTACTCAGGGTGGGTGATGGGGCATGGGAATTATCCTGCAGTGGCAATT---CTTGAAAACTG .....--:.:...:.::.x....:..::xx.x.:x.x:.xx.:.....x..xx.--..x.x.....:.......:.:.x.....:....:..:.xx:........:.:.:....:.:..::.:x......xx:.:..:.:.------------.........:---...........:.:......:.::......:...x...:..:.:..x.............:::.....:.x.....x......x..x.::.............xx:....x.:x...........-........:.....-:..x.....x:.x.:.---.x....x.... 5M2I47M2D85M12D10M3D125M1I14M1I16M3D11M 227/313 72.5% 317/94230402 0.0% 24/313 7.7% 33685469 NA +4089 chr4 + 190214555 76685253 76685252 76685334 82 AACAGTATAGAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGACACACTGGAAGAAGAAGAATTGTCTTGGGCCACACATA chr4 - 94230402 50314685 50314684 50314766 43915637 43915636 43915718 82 AATTGTAAAGCACATGGGCATCCAAACTTTTGTCTTATCTGGGACACATTTAGTGAAAAGAAATTATCTTGGACCACATATA ..:x...x..x:..x...::.....x......x...x:..........:.x::x...:.::....:......:.....:... 82M 59/82 72.0% 82/94230402 0.0% 0/82 0.0% 26370568 NA +3482 chr4 + 190214555 76685265 76685264 76685337 73 CAGGGGTGTCCAATCTTTTGGCTTCCCTGGGACACACTGGAAGAAGAAGAATTGTCTTGGGCCACACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ....:x.:.....:...:..x........:.x....x..::x...x.:.....::..x....::..:x...:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 66799408 NA +3605 chr4 + 190214555 76700873 76700872 76700941 69 CTCCTGGGTTCAAGTGGTTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGAGCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.............x...x..x.x........::::.........:.:....x...-----...... 58M5D6M 52/64 81.2% 64/94230402 0.0% 5/64 7.8% 58503734 NA +9483 chr4 + 190214555 76730786 76730785 76730958 173 CCTCCTGTGTCTCCCCAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAGCATGATGCAGATATCTCAGGGTATGATCGGCCCTCCTTGGCACCAAAGCTACCATTCCAGGTAAGTGGC-TATAGCTGAGACTG chr4 - 94230402 42981074 42981073 42981247 51249156 51249155 51249329 174 CCTTCTGCTTTTACCTAGGCGGAGTGAAACTCCGGGCCGACCTCACTCCTGGCATTCAACCAAACTTTTGGAGAACCAACCCGATCCCAGCATGATGCAAATATCTCAGGGTATGCTTGGCACCCCTTGGCTTCAGTCCTACCACTCCAGGTAAGCACTATACAGCTGTGGTTG ...:...:x.:.x..:.....x.....:x..x.:..............x.....:x....:...::.xx......x.........x.............:...............x.:...x.:.......x:..:xx......:..........::x:-..:.....x.::.. 159M1I14M 133/173 76.9% 174/94230402 0.0% 1/173 0.6% 33749712 NA +3204 chr4 + 190214555 76735852 76735851 76735927 76 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATTTTAGTGATGGTATCTTCCCCAC chr4 - 94230402 69437739 69437738 69437806 24792597 24792596 24792664 68 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGTAATTCTGT-------TCTTTCTCAC .........x........:x...................x.-..:...x:..x..:x..-------....:.:... 41M1D17M7D10M 56/68 82.4% 68/94230402 0.0% 8/68 11.8% 7298113 NA +4869 chr4 + 190214555 76736246 76736245 76736396 151 CTTTGACATATGCTATGCCATTGAGTGCCGGGTCTGATTTCCCTGATCTGGCTGGCTTGGGAGCTATTTCCTTCCTTTCTCCCTTGAATTTATACCTATCTGTCCCGAAGTAGGATGCGCCATTCAGTCAACTGACTTTCTCTGATAGAGA chr4 - 94230402 69279881 69279880 69280029 24950374 24950373 24950522 149 CTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACC--GCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGA ..x:.....x..::.:x.......x::..:..x:......xx...............x..x:.x.:.:........:....x.:--:x.::..::x::..:x........:x.x.:..x:x:.:x.:xx::x:...:...:.:........ 84M2D65M 94/149 63.1% 149/94230402 0.0% 2/149 1.3% 7456365 NA +75250 chr4 + 190214555 76738180 76738179 76741634 3455 TCAGCTTTGTGTTTAGCTTTCCCACCACAAACAAATTGTTTCTAGTGCAGTTAAGATTCCAGGAAGATTGCCAGGGTGTATCCTTCAATTCCATAAAAAGGAAAGATATTAACTAAAAACATATACATGTGCACACAAAGTCTCCTTCACCCGTGCCTATTCTCTTATTAACTTTTTCCCCTCTTCCCACAAACAGCCCCAGTAGACACACAGTTTCAGTCTCAATCACTCTTCTACCTCTCTCATTTCTTGGCACATGCAAAATGTCATTTCCAGCATGCAGCAAATCACATCAAAGTGCTGCCTGTGCCCAAAGGCCACGTGGCTTCCTCTGAGCTCCTCATTCCTCTCCTTGCTAGCCTGGGTGATTAATTAGAGGCAGATAGGTTAGAGTGTTGGGCAGTTACTCCTAGCGA-------TGAC-ACAGA-AGGAGGCTGAGCAAGGCCCAAATATGGCCCTTTTTACCCACCCTTCCAAACACCAAACCTCTTGCACAAGAGAACATTTATAAGCTGGGTCCTCTGCCTGTAAGCCTACTAAATGATAACAGCTCAGTGGTACTGACTGCTTTGTCTTTCTTCCAGCTCCTCTACTAGTGACCTCTCCAACTATGACCATGCTTATCTAAGGCGGAGCCCTGACCAGTGCAGCTCCCAGGGGAGCATGGAGAGCCTGGAGC------CCAGTGGGGCATACCCACCCTGTCATCTTTCCCCTGCCAAGTCCACCGGCAGCATTGACCAGCTCAGCCACTTCCATAACAAGAGAGACTCGGCTTACAGCTCTTTCTCCACCAGTTCTAGCATCCTAGAGTATCCACACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAAGGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGGAGGGGAGTCTCAGCAGAGTATGAGGTGAACTCTTCAGCCCTGCTGCTTCAAGGTAGGGAGGCCCGAGCCTCAGCAAATGGTCAGGGCTATGATAAATGGTCTAATATTCCTCGGGGCAAGGGAGTGCCACCCCCATCCTGGAGCCAGCAGTGCCCCAGTTCCTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCTCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGCCTTGATCAGAAACGGCTCTGCCGGCCTCAGGCAAA----------------CTCTTTAGGCTCC-----------------CTGAAGTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACAGCCCCCCAGTGAAGCCCAAGCATAACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGTGGATAC---ATAGCCCCTCAGGGAGCATGCAACAAGATGGCTACCA---------------TTGATGAGAATGGGAACCAGAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCAGCCCTTAGAACATGACTTGCTGTCCCCAGTGGAGAAGAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTC------TGTTCAG-----TGCCTGAAAATGAGGAGGATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATCTTCTCATCCCCACAGCCTCAAATGCCCTCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTTCCAGGCTCTCAGAGCCCTGGGAGGGCGATTTCCAGGAAGACCACAATGCCAACCTCTGGAGGAGGCTGGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAGACCA---AGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCTGAGAAGACACAGCAGCCTGGAGCTAGGCCGGGGAACCCAGGAGGGTTACCCCGGGGGCAGG----CCCACCTGTGCAGTCAACACCAAGGC--AGAAGACCCTGGGAGGAAAGCCGCTCCTGACCTCGGGAGCCATCTGGACCGGCAGGTTTCCTACCCGCGGCCCGAGGGGAGGACCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCGCCTGCCCCCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCG---GCTCTTCAGGGCTTTC---AGTACGGGAAGCCCCACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACC---GAGTGTGGGCGGCTCTGGTTTTGGCCATAACTATAGGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCACACATTCGTTTCTCTGAGTCAGCTGAACCCCTAGGC-------------AACGGGG-----AGCAGCACT-TCAAAAACGGGGAGCTGAAGTTGGAAGAGGCTTCCCGGC-------AGCCCTGCGGTCAGCAGCTG-AGCGGAG-----------------GAGCGTCGGACAGCGGCC-----GTGGCCCCCAGAGGCCGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAGCCAGAGAGGGAGCCCGAGTGGCGGGACAG-GCCCGGCTCGCCCGAATCGCCCCTGCTGGATGCCCCCTTCAGCCGCGCCTACCGGAACAGCATCAAGGACGCACAGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGTCGAGACCTGGAGCTGGGGGCGCCCGTGGCGTCGAGGTCCTGGCGG------CCACGGCCTTCCTCGGCCCACGTGGGGCTGCGGAGCCCCGAGGCGTCGGCCTCCGCCTCCCCGCACACGCCCCGGGAGCGGCACAGCGTGACCCCTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTGCCGCCCGGAGA--------------------GGTGCTCGCCGGCGCCTGACTCCCGAGCAGAAGAAGCGCTCCTACTCGGAGCCCGAGAAGATGAACGAGGTGGGGATCGTGGAGGAGGCCGAACCGGCACCCCTGGGCCCGCAGAGAAATGGGATGCGT------TTCCCGGAGAGCAGCGTGGCCGACCGGCGCCGTCTCTTCGAGCGCGATGGCAAGGCCTGCTCCACGCTCAGCCTGTCGGGGCCCGAGCTGAAGCAGTTCCAGCAGAGCGCCCTGGCGGACTACATCCAGCGCAAGACCGGCAAGCGGCCTACCTCCGCCGCCGGCTGCAGCCTCCAGGAGCCCGGGCCACTGCGTGAGCGCGCCCAGAGTGCCTACCTCCAGCCCGGCCCCGCGGCGCTCGAAGGCTCCGGCCTCGCCTCGGCCTCCAGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGGCCAC chr4 - 94230402 42982644 42982643 42985985 51244418 51244417 51247759 3342 TCAGCTTAGTTTT---CTTTCTCA--GCAAACAAACTGTCCTCGGGACAGCTGAATTTCCAGGAAGCTTGCCAGGGCATAGCCTTCATCTCCATAAAAAGGAATGAAATGGGAAAAAAAGGAAGAGAT-------TAGATTCCCCCCAGATCGC-------CTCATATGATCCTCTCCTCCTCCTT-----GGTGGCGTCGG------------------------CACTCATTCAGCTTTTCAAGTGCTTTGGATAGG----------TTTGATGGGTGGAGTTGATC-----------TTCCCTGGCTCCAGAGATGCTCTGTCT--CTCTG---TCTGCGTTTCTCTCCTCCCACCCCTTGGTGGTAAATAAGAGCCATGT--GTTGCAATGTCAAGCAGTTCCTTTTAGTGAACTGAGATGACTGCAAACAGGGGATGGAGCAAGGCCCAAATATGGG--TTTTCATCTGCACGTCTCAAAGCTAAACATATTGCTTCTGAGCTCACTGAAAAGTTG----------TTGT--GCCTCTTCTCTGCTAACAGTGGGTTCTTACT--CTCCTCTCGCTCTTCCCCAGCTCCTCAACCAGCGATCTCTCTGGTTATGAGCATGGCTATCTGAGGAGAAGCCCTGACCAGTACAGTTCTCAGGGCAGCATGGAAAGCTTGGACCACTCCTCCCCTGG---CTACCATCCTTGTCACCTGTCCCCAGCCAAATCCACCAACAGCATCGACCAGCTCTCCCACCTGCACAGCAAGAGAGATTCAGCTTACAGCTCCTTCTCCACCAACTCCAGCATTCCTGAGTA--CGCCGCTTCGCCGTTC-AGCAAGGAGCACTCGTGCTCCACAGACAGCATGCGCTCCCGCGGCAGCCTGCCGGAGGGCATGAAGCAAGCTGACATCAGGTATGTCAAGACAGTCTATGATTCCCAGCGAAGGATTTCTGAGGAGTACGAGGTGAAATCCTCTGCTTTGCT---TCCAAGCAGTGAGGCCCGGGCCTCTCTGGACGGCCGTGGCCATGGCAGACTCCACAACTTCAGCCGGAACAACACAG------CTCCCTCCTGGATGCAGCCAGGCCAGGGCTGCTC--AGACAGCGAAAGTAAACCCCAC-------AAGGGACCTCCCTTGCCTCCCACTCGCAGCGACAGCTACGCAGCCATCAGGCATCACGAGAGACCCAGCTCATGTTCTGGCCTTGATCTGAACAAGCCTAGCCGAAGCCAGCTGAAAGGGTCCTGGTCTCCTCTTGTCAGCCCCCTCTCCCAGGGACCTCTGCTGAAGACCCACTATGGGGAAGGGCAGCTGCATACAGTGGTGGAGAAGAGCCCGGAGAGCAGCCCCACAGTGAAGCCCAAGCAGAGCTATTCCCAG---------CCAGGGCAGCCCCTGCTGCCTACTGGGGTCTACCCAGTACCTTCTCCAGAGCCACACTATGCCCAGGTGCCCCAGCCTTCTGCAAGCAATAATGGGACTCTTTTTCCAGCTCTGGCCAAAGAAAGTGGCTACTCTCCATCTCTTCCAGCCTCATATGACAAAGGTGCAGCCAGCAGCACCCTGGGCTTTGATGAGAATGGAAACCAAAGTACTACAAACAGGTT---GGCTGTTTTCTACGAGCCCCCAGA--------TGCT----------GAGAGAAAGCACGATGCCACAGCAAAGCTTGTCCAGGAAAAACCTCATAACACAGCAGGTCCAGAAGTCTACTTAAGCATGTCAAGGAAG-------GAGGAG--TTGTTACCCTCTTACAAGGTAGCACACAGCA----ACCGAGA-------CACTGTGAGTCCTGCACAGGCCTCTAA---ACACAGCTTTCAAGCCCCGCAGATCCAGCCAAGAGATGCCGGTGAGAGAAAAAACCCCTACCAGCCCAGAGAGGACCGGGAAGATGAATCCCAGGCAGACAAAAATGGCAACGTGCAGATAAA---TGAGAGAGATGCTGCCACTCACCTCCAGTGGGGTCAC---AGCAAATCCAGGCAGTATAGCTTCTCTTCTTTGCAGAACATCCCTGAGAGCTCCAGGAGGCAAAGCAGCTCTGAGCCATGT------------GAAAATTATTCCAGTGCCAAGCTGTCCTACTTGAACAG-CAGCAGCAAAGAGGAGAGGGATCACAGGGGACAGT--------------GGAGCAATGCAGACCCGCAGGCCTTTGTGAGGCAGGACGAGGGCAAGAGCA------TGGCCCCATCCCATGCTGTTGAGCCAAAATACGAGGAGATTCCTTTGC---AGCACCCAAAGACCTCTGATCTTGGGAGGAGCCGGCTCAGCTCTAGCAGCACCCAAGGTGTTCTTTATGGCAAACCAGATCCCAGCAAGTCCCGCTGCTCTGTGCTGGAGAAGGTCAACAAATTTGAGCAGCGAGAGCAAAGCACTCAGCGGCCCCAGAGTGCTGGCGTTCCCAGCTTTGGCCAGCACTATGGGCTCAGCAGGGTAAGCCAGCCTTCCAGCACC----AAGAGCTCTCCAAACAGCCCAGAGGACACG---------CGGAGCAAACTTGGCACCCAGCTGCCCAGTGAGATGAGCGGGGTCTCCAGCCCCTCTGTCAGGAACAG------GAAGTTGGAAGAGGCTGATTGGCGCTGTGTGGAGCTGCAGATGGCAGCTTCAGCGAAGCTGGCAAGATGCAATGAGTACTATGGCCCGTGTCCTGAAAGTGAAGTGCAGGTAAGGGTGGCTCAGCTACCAAGAAGCAAAAGCACATTCCAGCTAGGAGGGGAGCCTGAGAAAGAAGTCCTCTGGAAGGACAACATCCAGGATGCCC-ACGGGTCACAGCTGGACACACCATTCAACAGGGCCTACAGAAACAGCATTAAAGATGCACAGTCCCGAGTGCTGAGGGCCACCTCCTTCCGGCGCATCAGCC------------CCCCGTTTGCGAATATGCCCAAGAGGACGATTCAGCGGCCTGCCTCGGCTCATGTGGGCATGAGGAGCAT----------GGCACCATCTCCC--CACACCCCAAAGGAGAGACACAGCGTCACGCCAACGGAAGGCAGCCT--------CTCTGCCCTCGACCACTCCAGGACACCGCACATCTTGCGCATCGGGGGCCGGAAGCGGCTGACAGCGGAACAGAAGAAGCGGTCTTACTCAGAGCCAGAGAAGATGAATGAGGTGGGCATCTCTGATGGG---GAGCCCTCACCTTTCTCCTTCCAGAAGAAAGGCCTCCATTTTGTATTCCCAGAGAACACGGTGGCTGACAGGCGTAAGATCTTTGAAAGGGATGGCAAAGCTTCTTCCACAGTCAGCCTCTCTAAGCCAGAGCTCAAGCAACTCCAGCAGAATGCCCTCGCCGACTACATTGAGCGCAAAACGGGCAAACGACCATCCTC------------------ACAGGACATTGGGCTGCTCAGGGAGCGATCCCACAGCTCCTACCTGCAAGCAG-----GTGGC-CAGGACAGCCAGAGCCTTTCCTCTGCCTCCAGCATGAATTCTCTCCAGGATCAGAACCTCTTCCGCCAGAGAGAGTTCAC .......x..x..---.....:..--:........:...:::::.x:...:.:.:x..........x.........::..x......x:..............x..x..x::xx.....x:x.x.x..-------:.:.x..:..::x:x:..:-------...x...x.x.:.:.:.:....:.:-----::::..x:.:.------------------------.....x.::.x..:.::x.x.x...x.x.:.x.----------...xxx.x:..x..:x:...-----------:.x....xx:...:..::xx:x..x..--.....---..:x.:..:.......:x.xxx...x....:.x...x....x..x:.--...:x.:...:::......x..::...:..-------....-:..:.-...:.::x...................x--....:.:.::.x.x..:x..x:.:....x.x....x:xx...xx..:.x.x...:..----------:...--....x:.xxx..x......:xx:x.xx....--..x..:.xx..:.:::..........x..:..:..:.....::::.....x....x:.....:...x.:.............:...:..:.....x........:...:....x.------..xx...---x....xx..:.....:..x.....x.....:......::......:.........xx....:.x..:.:.........:..:...........:..........::..:.....:.:x.....--.:.xx.:.x..xx:..-:..x:.....::..:x......::....::.:x:x:x.:..x..::....x.:x..:..x....:...:..x..:..:x.x....................:x...:.x.::.::.:..x.x:.....:........x..:..x..::....---..x.:.:..x........:.....xx:::.:..:.:x...:...::.:.:xx:x:..:x.:xx:...::...x:x..------.:..x.......xx....x:x...xx:.:.x..:--....x..x.x:.xx....::x.-------:x...xx.x...:.......x:....x..:.....:........xx.:x....:.::...x.:........x..x...:.........x...xx:..::x....:xx:...x::..----------------..:x.:..x.:..-----------------......x.:.xx.x::x:..:.:............x...x..........:..:....:.......x................x.:....x.....---------..x..x..:..:........x..::.x:.......:........:.::..........x............:..........::..:.::..:..x.:x..:.x:..x..x........:..:.....x...---x:.x.:.:..x:.xxx...:::....::xx..x:...---------------.............:.....:.:.:xxx.x::....::---.x:..::....:.x.....::...--------....----------....::..:.xx..x..:.....x...:x.....xxxxx...x::...xx.------x..:...-----.:.:.:.:x...xx:....x.-------..:...--x.x.:..x.::::x.....:.:..xx.x:..----.x:....-------...:xxx...xx::x..x:x.:...x.---x......:.:x..xx...x...:::...x.xx.:x.x..x.....:::x..:.:x:.:.x.x:..:.xx....xx.:....:.::..x.:.....x....x.x....x....x.x::..x:.:---x........x.x:x:x:x:..xxx..x..x:..:x..---:....:x...---...xx:x......x...:.x........:........:::x..:..:..x......::x....:.x.:------------..:::...::..:.x.x..:.----..:..:..x:...-..:..x...:.x--...:.:x:.xx:.:...x..:--------------.....x..x::....x.....::.::xxxxx..:.xx......x.:..x.:------:...::.x.:.x.::x:::x..x....:x:x...:...x:x...x:x.---x......:x.x..x..:::...x..xx....xx...:.:..:.x:.....:..:x:---.:....:.x...xxx.---.x:x.:.x...:...:......x...............xx......:...............:.x.x:...x.:..---.....:x....x::.::.:........xx.....:...:.x:....::x:x.:x:x.......:..:----:::.xxx..:.:.:x..x.x.:..x....:---------.x...:x.:..x::.x..:..x:-------------.:.....-----...xx.x..-...::...:.------................xx::...-------:.xx....:.x::......x-....:..-----------------.x:.xx:..x.x.:.x..-----...:xx:x...:x:xx..xx....:...x.:xx.x...x.:.....x........xxxx:.x.....x....::..:x:.xxx...x:.....:-::..:.xx:....-.xxx.:.x.x......::.x..x....:.x.x......x.:........:..:..:...........x..x:..:.............:..:..:xxx::..------------.x..xx.x...xxx.x.:..x:.x..------.x:......x.......:..:.....xx..x.....x:----------.x.x..::.....--.....x..xx:....x.:........x..x..x:.x..:...::...--------.:x.....:.x:..:.:.x::..--------------------..x.x:..xx:...x.....xx.x..:...........x..:.....:.....x...........:........x...x:x..x.:.---..:..xx....::.xxx.::x....::..x..xx.x.:.------.....:....:..xx.....:...x....:x:xx....:..:x.x........:..:.x:.....:x.......x..x::...x.....x.....::.........::.....x..x........:x.......:..x.....:..:..xx....------------------x.....xx::....::..xx.x.....xx....x..:x.......x..:x.x.-----.:...-.xx..x:..:xx:....:x....x.........x...::..x..x.:...x.xx.:...x:xx.x..:x..:...x:... 13M3D8M2D102M7D19M7D25M5D11M24D33M10D20M11D27M2D5M3D47M2D30M7I4M1I5M1I28M2D57M10D4M2D31M2D115M6I7M3D123M2D16M1D152M3D77M6D34M2D22M7D116M16I13M17I96M9D132M3I37M15I37M3D24M8D4M10D51M6I7M5I21M7D6M2D31M4D7M7D27M3D123M3D37M3D10M3I68M12D21M4I13M1D12M2I21M14D51M6D48M3D56M3I16M3I76M3I67M4D30M9D23M13I7M5I9M1I10M6D23M7I20M1I7M17I18M5I94M1I13M1D102M12D26M6I38M10D13M2D47M8D23M20I87M3D39M6I155M18D53M5D5M1D80M 2081/3165 65.8% 3342/94230402 0.0% 467/3165 14.8% 33755536 NA +3076 chr4 + 190214555 76756396 76756395 76756439 44 ACTCTCTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTAAATAT chr4 - 94230402 86355154 86355153 86355196 7875207 7875206 7875249 43 ACCTTCTCTT-CTCTCTCTCTCTCTTTTTTTTTTTTTTAAGTAT ..::......-............:................:... 10M1D33M 39/43 90.7% 43/94230402 0.0% 1/43 2.3% -9598758 -84631644 +10497 chr4 + 190214555 76756718 76756717 76756942 225 AGAAGAGTTCAGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGTGAACTTGCTGAAGGAAAACAGTGTAAAGAGGAAGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTGAAGGCAAGAGGTAAG chr4 - 94230402 42994795 42994794 42995019 51235384 51235383 51235608 225 AAAAAAGCCCAGAGGATATTAAGTCAGAGGCTTTAGCAAAAGAGATTGTCCATAAAGACAAGTCTCTGGCTGATATCCTGGATCCTGACTCCAAAATGAAGACAACCATGGACCTAATGGAAGGGCTTTTCCCCAGTGGAACCAGCTTGCTGAAGGAGAACAACATGAAAAGGAAGATGACACAGAAGAAAGCTAGCAGGACAGTAGCAGAAGATAACATGTAAG .:..:..::....:..:..:.::x..........:..x..:..:........:x.......:.....:..x..:..::.......x.......::x..........x........:........x:.x..:...x.x.:x::x.:............:....:::.:..:......::x.:.....::.xx.::...xxxx...x.xxx....::..x.x..... 225M 157/225 69.8% 225/94230402 0.0% 0/225 0.0% 33761923 NA +8358 chr4 + 190214555 76759523 76759522 76759701 179 CTTTGTGCTCTTTTTGGCCCAGGAATGAAGACAAGGAAGCAGTGAGCATGTTGGTTAACTGCCCTGCCTACTACAGTGTGTCTGCTCCCAAGGCTGAGCTACTGAACAAAATCAAAGAGATGCCAGCAGAAGTGAATGAGGAAGAGGAACAGGCAGATGTCAATGAAAAGAAGGTAAAT chr4 - 94230402 42995742 42995741 42995920 51234483 51234482 51234661 179 CTTTTTCTTCACTGTGGTGTAGGAAAGAAGAAAAGGAAGCTCCTGTAACCCTGGTCACCTGCCCTGCTTATTATAATGTTTCAGCACCCAAAGCAGAACTACTGAATAAAATCAAAGACTTGCCAGAAGAAGTAGGGGAGGAGGAGGACCTGCTGGACATCAACGAGAAGAAGGTAAAT ....x.x:..x:.x...:x:.....x.....x........xx:x:xx.:x:....:.x.........:..:..:.:...x..x..x.....:..x..:........:...........xx......x......:::x.....:.....x.x.x::..::....:..:............ 179M 128/179 71.5% 179/94230402 0.0% 0/179 0.0% 33763781 NA +3297 chr4 + 190214555 76769221 76769220 76769304 84 TGTGTGCATGTGTCTATATGCGTGTGTGTGTATATACACACAC------------ACCAA-----------------TTATATATATA-GTATGCATGTGTGTATGTACATACA chr4 - 94230402 25393260 25393259 25393373 68837030 68837029 68837143 114 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCA .............x.:....::.x........:.:........------------....:-----------------..:::.:.:.:-...x.:....:........:..... 43M12I5M17I11M1I25M 66/84 78.6% 114/94230402 0.0% 30/84 35.7% 51375961 NA +16974 chr4 + 190214555 76770623 76770622 76770904 282 CAGGCTGAGCTCATTGGAAGTCTCACCCACAAGCTGGAGACCCTCCAGGAGGCGAAGGGGAGCCTGCTCACGGACATCAAGCTCAACAACGCCCTGGGAGAAGAGGTGGAGGCTCTGATCAGCGAGCTCTGCAAGCCCAATGAGTTTGACAAGTATAGGATGTTCATAGGGGATTTGGACAAGGTGGTCAACCTGCTGCTCTCCCTCTCGGGGCGTCTAGCCCGTGTTGAGAATGTCCTTAGCGGCCTTGGTGAAGATGCCAGTAATGAAGAAAGGGTAGGT chr4 - 94230402 42999769 42999768 43000050 51230353 51230352 51230634 282 CAGGCTGAGCTCATCGGGAGCTTGACCCACAAACTGGAAATCCTGAAGGAAGCGAAGGAAGGCTTACTTGCAGACATCAAAATGAATAATGCTCTTGGAGAGGAGGTGGAGCTGTTGATCAGCGAGCTATGCAAACCAAACGAGTTTGACAAATACAAGATGTTCATCGGCGATTTGGATAAGGTGGTGAACCTCTTGCTTTCTCTCTCAGGACGCCTGGCCCGGGTAGAGAATGTTCTCAGTAGCCTAGGGGAAAATGCCAACAGTGAAGAGCGGGTACGT ..............:..:..::.x........:.....:.:...xx....:.......:::..:.:..::.:........:x.x..:..:..:..x.....:.........x:x:.............x.....:..x..:...........:..:.:.........x..x........:........x.....x:....:..:.....:..:..:..:.....x..x........:..:..::....x..x...:......::.:......:x.....x.. 282M 217/282 77.0% 282/94230402 0.0% 0/282 0.0% 33770854 NA +21076 chr4 + 190214555 76778797 76778796 76779796 1000 TTTCCCTGG------CAGAGCTCTCTTTACGAGAAAAGGAAGATCCTGGCTGGTCAGCATGAGGATGCCCGGGAGCTGAAGGAGAACCTGGATCGCAGGGAGCGAGTAGTGCTGGGCATCTTGGCCAATTACCTTTCAGAGGAGCAGCTCCAGGACTACCAGCACTTCGTGAAAATGAAGTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAGCAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTCAGATTTCATTCCCAAGGCTGGGGCCCTGGC-TCTGCCCCCAAACCTCACGAGTGAGCCCATTCCTGCTGGGGGCTGTACTTTCAGTGGT---ATTTTCCCAACATTAACCTCTCCACTTTAACCTCTTCTAAAATACCC--AACCAAAAGATCACTGTTTCTCTCAACACTATTTAATCTGAA--------AAATGTTTCAGTACAAACCACTGTTTGAACTATCTGGGTTA---TTGGTGTTTGTTCCTGATGAAAGGAAAAAAATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTGAGAGCTCGAAT---GCTGCTGGACACGTACCCCTTTCTATTATTACTTTGTAGTAGAAAGAAAGTTAATGAAAC---TGAGAACTGATTGGAGGGTGTTTGATCATTTAGTTTTTAACAGGCTGAGGCAACATGGATCAGTGTGTGTCCCCCTCAGGAATGTATCCACAGTGGCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGCAGGGTACAAGTACCATTAATGAAGGGTCTGCAA-CATAAAGCCTTAAAAAGACACACACTAAGAAAACTGTAAAACC-----------TTGAACATTGT---TATTTATATTTTTTAAA-ATGGAAAAGATCACTATGTTTGT-----TGTGCTAACCACTTATTTGATTCTGTTTTGTGGTGGACATAGATGATTACGTTTGAGCTTTGTATTTTGTGAAAACCTTAATGAAA----TGAATTCCAAAGATAGTCACG chr4 - 94230402 43000651 43000650 43001586 51228817 51228816 51229752 936 TCTCTCTGGTGTGTACAGAGCTCTCTGAATGAGAAGAGGAAACTGCTGGCTGGCCAGCATGAAGATGCCCGGGAGTTGAAGGAAAACCTTGACCGTCGAGAACGGGTGGTTTTGGACATCCTGGGCAACTACCTCTCTGAGGAACAGCTCCAGGACTACCAGCACTTTGTAAAGATGAAGTCCGCGCTCCTCATAGAGCAGCGAGAGCTAGATGATAAAATCAAACTGGGTCAGGAGCAGCTCAAGTGCCTGATGGAAAGCCTCCCCACAGACTTCACGCCCAGGGATGCAACAGCAGCAGCTGCCCT--AGCTGCAGCACTTG--CTACCTCTGCTGGAG---------TCAACGGTAAAACACTTCCAGCAGTCTCATCCTCACTCTAACCTTTCCCATGTGGACCTGGGGCAAAGTCTTCCTG-----CTTGAGTCTATTTAATCCGAGTACTGCGCAGATGGTTCTCTACA-------GTGACAATGAACAGAGACAGGTTTAAAACAAGATTTCGGTGGAGGAAACAAA----TAGCAATAATAAGGGTTTTATTTTTCTTTCCTTCCACCACTGCT-TCCTGGAAACTTAAATCACTCTGGAGGGAACGAA--ACTAAATTGTGTCTCCTCCTAACAGAGATGAAG---AAGAGACTCATGAGAA---------------TTAAACACGTTACTTTTAATAA--------AAAAAAAATCA-----CGTCCTC----------------------TCTTTCCTGCT-----------TTTCCTGCCTACCTGGCACCTCATTAAATAATGAAGGATCTAAAAGAATGAAGCCTTAAAAA--------------------TAAAACCAACCCATCCTACTGAACATTATTGATATTTATGTTTTTTAAAGAACGAGGCGATGTGTAAGTTTTTGTACATACTCTAATCAGTTGCTTGATTCTACTTTGTTCTGTATGTAGA-AAAGACATTT-AATTTTGTATTTTGTGAAAACTTTAACAAAAAGAGGGAACCCCAAAGATAGTGATG .:..:....------...........xx.:.....:.....:x.x........:........:............:.......:.....x..:..:x.:..:..:..:..x:...:....:...x...:.....:..x.....:.......................:..:..:.........:..........x.....:..::....:.....:..:.....:.....:.........x.......:...x....:.....x...x....:....:x....:..x..x::.xx::..-x......:--.:.:x..xx.x.x:--.:.:::.......:.---------...::...---.:x:.:...:..x.xx.x..::....:......:.:.:.x:xx:x..--::x....:xx.:x...-----..::.xx..........:..:--------.:...x...xx....-------..xxx..:x.x.x.:.x:.---..::x::xx.x.:::.:..:.:.:..x...----.xx.x.x:.x:.:.x:...x.::.....x..:.:.x:x.:..x.-.:...::.:..::...---x...xx..:x...x.--x..xxx.xx.:.:x.:.:x..::...:.x:...---.x..:..---......---------------..:.x..:x.x::......:.:--------..x.x::....-----:....:.----------------------:...:.:....-----------.x.....x:x:.xx..:..xxxxx:x.x.........:...:x..-x..:............--------------------.......-----------:........:.---.......:.........-.xx..::x...xxx..x....x.-----.::x....:..x..::........::.....xx..x.::....-:.xx..:...-.::..................:....::...----x...::...........x.:. 9M6I284M1I8M2D14M2D15M9D8M3I47M2I16M5D21M8I15M7D19M3I30M4D44M1D16M3I15M2D33M3D7M3I6M15D22M8D11M5D7M22D11M11D45M1I16M20D7M11I11M3I17M1I23M5I43M1D10M1D31M4I21M 607/882 68.8% 936/94230402 0.0% 172/882 19.5% 33778146 NA +3300 chr4 + 190214555 76780529 76780528 76780599 71 TGAAGTAAAAAAAAAAAAAAAATGACAAGGGAACCAAATGCTCCTTCTCCCCTTAGTACATTTTCATTACT chr4 - 94230402 87593624 87593623 87593694 6636709 6636708 6636779 71 TAAAGTTAAAAAAAAAAAAAAGTGACAAATGAAACAAATGCAAGTACTCTCCTTCGAGCCTTCACATTGTT .:....x..............:......:x...x.......xxx.x...:....x.x:.x..:x....::. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% -10813095 -83417307 +3021 chr4 + 190214555 76785706 76785705 76785752 47 TCAATGTGTTTTTTGTTTTTTTGTTTTGGTTTTGTTTTGGTTTTTTG chr4 - 94230402 56587271 56587270 56587317 37643086 37643085 37643132 47 TCAGTTTGTTTTTTGTTTGTTTGTTTTTACTTTGTTTTGCTTTTCTG ...:.x............x........x::.........x....:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 20198435 NA +3199 chr4 + 190214555 76796479 76796478 76796537 59 AATGTACA--CTTAAAATTTGTGTATTTTCCTGCATGTAAATTTTGCATCAAATGAAAGCA chr4 - 94230402 25797891 25797890 25797951 68432452 68432451 68432512 61 AATGTACAAACTTAGGCTTTCTCTATTTTTCTGTGTGTAAATTCTGCACCAGAGGAAAGCA ........--....::x...x.x......:...::........:....:..:.x....... 8M2I51M 47/59 79.7% 61/94230402 0.0% 2/59 3.4% 50998588 NA +3135 chr4 + 190214555 76800038 76800037 76800095 58 AAAGGAAGGGAGGAAGGAAGGAGGGAAGGAGGGAAGGAAGAAAGACAAAAGAAAGAGC chr4 - 94230402 87012030 87012029 87012087 7218316 7218315 7218373 58 AAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAGC ..::...x..:..:....:..:...:...:.....:.:.x...::x....:...:... 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% -10211992 -84018410 +3088 chr4 + 190214555 76827217 76827216 76827271 55 GGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGACACAC chr4 - 94230402 18197145 18197144 18197199 76033204 76033203 76033258 55 GGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........:.x...x.xx.x........:............:.:....x:::... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 58630072 NA +3053 chr4 + 190214555 76828190 76828189 76828246 57 ACATTCACATAGTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCCTTTTTTTTTTTTT chr4 - 94230402 7586129 7586128 7586185 86644218 86644217 86644274 57 ACTTTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTT ..x..:x.x...:......:....:..::..:....:.....x...:x......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 69242061 NA +3805 chr4 + 190214555 76835801 76835800 76835874 74 CTGCAACCTCCACCTCCCGAGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGTTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:.:.........x...x.xx.x.........:...........:.:....xx..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 58638675 NA +3179 chr4 + 190214555 76859313 76859312 76859363 51 CTCAAAAAAAAAGAAAAAAGAGAAAAGAAAAAAGAACAACAAAAAAACCAG chr4 - 94230402 81833608 81833607 81833658 12396745 12396744 12396795 51 CTCAAGCCAAAAGGAAAAAGAGAAAAGAAAAACAAAAAACAAAGAGGCCAG .....:xx.....:..................x:..x......:.::.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -4974295 -89256107 +3040 chr4 + 190214555 76869253 76869252 76869305 53 CAGAGCGAGACTCCTTCTCAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA chr4 - 94230402 4077718 4077717 4077770 90152633 90152632 90152685 53 CACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGA ..x..:..:.:.:.....x.............x..:..:::......:...:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 72791535 NA +3578 chr4 + 190214555 76876234 76876233 76876316 83 CTGCAACCTCCAAATCCCAGGTTCAAGCAATTCTCCTGGCTCAGCCTCCCAAGTAGCTGGGATTACAGATGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx.:x.:.::........::x...x.xx..........::...........:.:....x:....--....::.. 73M2D8M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 58679108 NA +14905 chr4 + 190214555 76895610 76895609 76896084 475 GCCTTTCTGGTAGGGGAAGAACTTCCAACTAAGGGATAGACAGGGAAAATGGGCTTGCCCCGAGGAGCTCCCAACAGCTGCCATATTTCCCCAGAGGTATTACTGGTTAGATACTGCCATGGCTTCTTCCCACTGCTGTCCCTGACATTTACCCGAGAAGCCAACCTTTGCACTAGCAATTTGATGACCCCCTGGTGGCCGTGAATGGCTGCAAGGTGCAGCGGGGTATATCCACAACTGGACCTCACGTTTACATCAAGGACAATCCCTGCCTTCTTTGCTCCAGACACCAAGTCCTGAAGGGCCCTGAGGTCACCATGTTTGGCTATCCAGTGCAACGCAGTGTACCCAGTCAAAAAGTCTTTGTGCAAGGCCAGTTGAGGGTCCTCCCAGAACAAAGTCCACACCTGAATCCAG-GAGCCACTGGCAAGCTTCACAATCCACTCATGCTCCCTGGCATCTAGTGGAACCAGGG chr4 - 94230402 43026487 43026486 43026961 51203442 51203441 51203916 475 GCCTTGCTGGCTGAGGACACACTACAGGCCAGGGGCTGCGTGGGGAACATAATCGTGCCCCGGGGAGCCTGCAGGAGCTGCCAGATCTCCCCGGAGGTGCTGCTGCCCAGGTACTCCCAGGGCCGGCGCCCGCTGCCATCCCGCACCTGTACCTGGCAGCCCAGCTGCAGCACCAACACCTTGATGACGAGCGTGTGGCCATGTATGGCAGCCAGGTGCAGCGGAGTGTACCCGCAGCCCGACCGAGCGTCCACGTCCAACGCCAGCCCAGCCTGGCGTGCTGCTTCGGCCAGTTCCTGCAGGCCTGTCCCATCACCGTGCTTGGCCAGCCAGTGCAGCACCGTGAAGCCCGACATGAAGTCCCGCTGCAGGGCCAGCTCTGGCTCCTCCAGGAAAAGTCCCCGCACGTGGGCCCAGCGCCCCGCTGACAC-CGCCACCAGCCAAGCGTGCTCCCGCCGACCCAGTGGCACTGTGG .....x....:x.:...x:x...x.x::.:.:...x.:x:::.....x..::x.x.......:.....::x..:x........x..:.....:.....::.:...x::..:....x...x...:xx:x...:....::....xx..x.x....:.:x.:x...:.:x:x....:.:..x:........xxx.xx......:..x.....x..x...........:..:..:..:..:.:x....xx:...::..:..x.:x:.x.x...x....xx:x....x.xxxx:...:x.....x...x.:x.xxx:.....:..:.....:.x........:.:.x...x.x..x.x..x:.....::xx....:......:.xx..x......x:...x.:xx:..:...x..:::....-.xx..:...:..x-.x:...x.x...xx.:.......xxxx.:.:.....x..::x.. 417M1I13M1D44M 301/474 63.5% 475/94230402 0.0% 2/474 0.4% 33869123 NA +3061 chr4 + 190214555 76900846 76900845 76900897 52 AAAAAACAAAAAAAAAAAAAACAAAAAAAAAAAACAAACAAAGAAAGAAAAG chr4 - 94230402 11261215 11261214 11261266 82969137 82969136 82969188 52 AAAAGGGGGAAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAG ....::x::.......::.....:....x.............x...x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 65639631 NA +3059 chr4 + 190214555 76900847 76900846 76900907 61 AAAAACAAAAAAAAAAAAAACAAAAAAAAAAAACAAACAAAGAAAGAAAAGAAAAGAGCTA chr4 - 94230402 7711349 7711348 7711409 86518994 86518993 86519054 61 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAACTA ....:..:.....:......x....:......x::..xx....:..::.:.:..::.:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 69189498 NA +3084 chr4 + 190214555 76918859 76918858 76918937 79 ATAAAAAAAAAATAAATAAATAAAAAAATAAAAAATAAAAAAATAAAAAAATAAAAATAAAATAAAATAAAAAAAAAGG chr4 - 94230402 24496847 24496846 24496925 69733478 69733477 69733556 79 ATAATGAACAAACAAATAAGAAAAAAAACAAAAACTATTCCAAGAAACAAATAAAACTATTGCAAAGAAAGAATAAAGG ....x:..x...:......:x.......:.....x..xxxx..x...x........x..xx::...:x..:..x..... 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 52422012 NA +3229 chr4 + 190214555 76918876 76918875 76918962 87 AAATAAAAAAATAAAAAATAAAAAAATAAAAAAATAAAAATAAAATAAAATAAAAAAAAAGGAAAAAAAAAAAAACAATTGACATAC chr4 - 94230402 87141209 87141208 87141295 7089108 7089107 7089194 87 AAATACACAAAAAAAAAATAAGGACACAAATACACAGGCATTAAAAAAAAGAGAGACCAAAAAAAAAAAAAGCAATATTTTGCATAC .....x.x...x.........::.x.:...x.x.:.::x..x...x....x.:.:.xx..::.........:x..:.x..x:..... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% -10222333 -84008069 +3281 chr4 + 190214555 76929140 76929139 76929238 99 GGGAAGAATGAAAAGGAAGAAAG------------AAGAAAGAAAAGGGGAAAGGAAGGGAGAGGAGGAGGAAGGAGAGAGAAAAAAGAAGAAAAATAAAAAATAAAATTA chr4 - 94230402 59433013 59433012 59433123 34797280 34797279 34797390 111 GAGAAAAACAAGAGGGAACAGAGTCAGCAGTGCTTGTGTATGGAATGGGAATGCAGACTGGGAAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGAACTA .:...:..::.:.:....x.:..------------:x.x.x.:..x...:.x:x::.xx.:..:.....:...:....:.......x...:.....x:.....:.:..:.. 23M12I76M 65/99 65.7% 111/94230402 0.0% 12/99 12.1% 17496127 NA +3081 chr4 + 190214555 76931014 76931013 76931075 62 TCATTCTTTTGTTTTTTTCCTTTCTGAACATTTTCTTTTTCTTTTCTTTTTTTTTTTTTGTT chr4 - 94230402 38976930 38976929 38976991 55253412 55253411 55253473 62 TTATTCTTTTGTGTATCTCTAAACTGAAAGTTTGCTTTTTCTTGTTTTTTTTTTTTTTCCTT .:..........x.x.:..:xxx.....x:...x.........x.:............:x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 37954084 NA +3091 chr4 + 190214555 76956977 76956976 76957012 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGACAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:....................x.... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -4672087 -89558315 +3259 chr4 + 190214555 76956977 76956976 76957016 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGACAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...............................x....:x.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 57974662 NA +8986 chr4 + 190214555 76996404 76996403 76996555 152 CTTTCTCCCCTGAAATTGCAGAATGAAGAGCTTCGAAACTTGTCTTTGTCTGGCCATGTGGGATTTGACAGCCTCCCTGACCAGCTGGTCAACAAGTCTACTTCTCAAGGATTCTGTTTCAACATCCTTTGTGTTGGTAAGTTATTCATCAC chr4 - 94230402 43054778 43054777 43054929 51175474 51175473 51175625 152 CCTTTCTTCTTGGCCTTACAGAATGATGACCTTAGGAACCTGTCCCTCTCCGGCCATGTGGGCTTTGACAGCCTCCCTGATCAGCTGGTCAACAAGTCAACGTCACAGGGCTTCTGCTTCAACATCCTCTGCGTGGGTAAGTTGTTTCGCAC .:..::::.:..:xx..:........x..x...x.:...:....::.x..:...........x.................:.................x..x..x..:..x.....:...........:..:..x........:..:xx... 152M 118/152 77.6% 152/94230402 0.0% 0/152 0.0% 33941626 NA +3167 chr4 + 190214555 77001425 77001424 77001503 79 CTGCAACCTCCGCCTCCCAGGTTCAACGGATTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:.::.......xx.x...x:xx.x.........:...........:.:....x...--...... 71M2D6M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 58804299 NA +13808 chr4 + 190214555 77005533 77005532 77005799 267 CTGATGAATTGAACTGATGTCTGAGA--------GACATTGACACATTCTCTGATTTTTCTTTTGTGGTTATGTAGGTGAGACAGGCATTGGCAAATCCACGTTAATGGACACTTTGTTCAACACCAAATTTGAAAGTGACCCAGCTACTCACAATGAACCAGGTGTTCGGTTAAAAGCCAGAAGTTATGAGCTTCAGGAAAGCAATGTACGGCTGAAGTTAACCATTGTTGACACCGTGGGATTTGGAGACCAGATAAATAAAGATGACAGGTA chr4 - 94230402 43058179 43058178 43058449 51171954 51171953 51172224 271 CTGGTAAATGTGTCTGATG-ATGAGATGGGGATGGGAATTGGCACCAT-TCTGACTCTGTTTTTGT--CTGCTCAGGTGAAACTGGCATCGGCAAGTCAACGCTGATGGACACTCTGTTCAATACAAAGTTTGAAAGCGAGCCTGCTACACACAATGAGCCTGGTGTGAGATTGAAAGCCAGGAGTTACGAGCTCCAGGAGAGTAATGTCCGTCTGAAGCTGACCATTGTTGACACGGTTGGATTTGGAGATCAAATTAACAAAGATGACAGGTA ...:.:...xx:x......-x.....--------.:x....:...xx.-.....:.:.x:......--:.::x:......:..x.....:.....:..x...:.:.........:.......:..x..:........:..x..x.....x........:..x.....xx.:..:........:.....:.....:.....:..:.....x..x......:.:..............x..x...........:..:..x..:.............. 19M1D6M8I14M1D17M2D207M 206/263 78.3% 271/94230402 0.0% 12/263 4.6% 33947354 NA +13847 chr4 + 190214555 77011717 77011716 77011933 217 GCTGTTTCTGCATTCT----AGCTATAAGCCGATAGTAGAATATATTGATGCCCAGTTCGAGGCCTACCTGCAAGAGGAATTGAAGATTAAACGTTCTCTCTTCAACTACCATGACACGAGGATCCATGCCTGCCTCTACTTTATTGCCCCTACTGGACATTCACTAAAGTCCCTGGATCTGGTCACCATGAAAAAGCTGGACAGTAAGGTACTTGCTGCC chr4 - 94230402 43063023 43063022 43063243 51167160 51167159 51167380 221 GCTCTCTCTTCTCTCTCCTCAGCTACAAGCCCATAGTGGAGTACATCGATGCACAGTTTGAAGCCTACTTGCAAGAAGAGCTGAAGATCAAACGATCCCTGTTCAATTACCACGACACCAGAATTCATGCCTGCCTGTATTTCATTGCACCAACTGGACACTCGCTGAAATCCCTAGACTTGGTCACCATGAAGAAGCTCGACAGTAAGGTACTTGCTGCC ...x.:...x.x:...----.....:.....x.....:..:..:..:.....x.....:..:......:.......:..::.......:.....x..:..x.....:.....:.....x..:..:...........x..:..:.....x..x........:..:..:..:.....:..::.............:.....x..................... 16M4I201M 176/217 81.1% 221/94230402 0.0% 4/217 1.8% 33948694 NA +12335 chr4 + 190214555 77014806 77014805 77015026 221 TATTTTTCTTATGTTGGAAT-TGTGTAAAAATGGACGTGTCTGTTTTACAGGTGAACATCATTCCAATAATTGCAAAAGCTGACACCATTGCCAAGAATGAACTGCACAAATTCAAGAGTAAGATCATGAGTGAACTGGTCAGCAATGGGGTCCAGATATATCAGTTTCCCACTGATGAAGAAACGGTGGCAGAGATTAACGCAACAATGAGTGTAAGTCCT chr4 - 94230402 43065307 43065306 43065524 51164879 51164878 51165096 218 TACTCTCCTCATGGTGCATTGTGTGCAGTACTG----TCCTTGTCTTGCAGGTGAACATCATCCCCATCATTGCCAAGGCCGACACCATTGCAAAAAACGAGTTGCACAAGTTCAAGAGTAAAATCATGAGCGAGCTGGTCAGCAACGGCGTCCAGATCTACCAGTTCCCAACAGATGAAGAGACAGTGGCTGAGATCAATGCCACAATGAGTGTATGTCTT ..:.:.:..:...x..x.x.-....:.:x.x..----.x::...:..:..............:..x..x.....x..:..:...........x..:..:..::.......:...........:........:..:...........:..x........x..:.....:..x..x........:..:.....x.....:..:..x............x...:. 20M1I12M4D185M 171/217 78.8% 218/94230402 0.0% 5/217 2.3% 33949499 NA +3314 chr4 + 190214555 77016584 77016583 77016696 113 ATATATATACACACACATATATATATATACACATATATATATATATACACATATATATATATATATATATATACACATATATATATATATATGGCCAGGCACAGTGGCTCATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTG----CACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT---GCCACAAACACTAACATATA .:...............:.:.x:x.:....:...:x:x:.x.:----.....:...xx.x::..x..x............x...x.....---....x:x...x.::.x:... 43M4D43M3D20M 73/106 68.9% 106/94230402 0.0% 7/106 6.6% 72599235 NA +9682 chr4 + 190214555 77019117 77019116 77019269 153 CTGTCAGAGCA--GGGGAAAGTAACTATTCTC--TGTCCTTTTGCTTGGCAGGTCCATCTCCCATTTGCAGTGGTTGGCAGCACCGAAGAGGTGAAGATTGGCAACAAGATGGCAAAGGCCAGGCAGTACCCCTGGGGTGTGGTGCAGGGTATGTGC chr4 - 94230402 43067202 43067201 43067358 51163045 51163044 51163201 157 CTGTCAGTGCATCACAGGAGATCCCTAACCTCATTGTCCCTTTGCTCCCCAGGTCCACCTTCCATTTGCCGTAGTTGGCAGCACTGAAGAAGTGAAGATTGGCAACAAGATGGCAAAAGCCAGGCAGTACCCCTGGGGTGTTGTCCAGGGTATGTAC .......x...--:x:.:.::.xx...x:...--.....:......:xx........:..:........x..:...........:.....:..........................:.......................x..x..........:. 11M2I19M2I123M 128/153 83.7% 157/94230402 0.0% 4/153 2.6% 33951915 NA +13150 chr4 + 190214555 77020496 77020495 77020708 213 TTGTAGTTGAGAATGAAAATCATTGCGATTTTGTGAAACTTCGAGAGATGCTGATCCGCGTGAACATGGAGGACTTGCGAGAGCAGACTCACACCCGCCACTATGAATTGTACCGACGCTGTAAGCTTGAAGAGATGGGGTTCAAGGACACTGACCCTGACAGCAAACCCTTCAGGTATGAAGGCATCTAGCAATCAGGTGTCTCCCAGACAG chr4 - 94230402 43069187 43069186 43069395 51161008 51161007 51161216 209 TTGCAGTTGAAAATGAAAATCACTGTGACTTTGTGAAGCTGCGGGAGATGCTGATCCGAGTGAACATGGAGGACTTGAGAGAGCAGACACACACCCGACACTACGAGCTGTACAGGCGCTGCAAGCTAGAAGAAATGGGATTCAAGGACACAGATCCAGACAGCAAGCCTTTCAGGT----AGGCAAGTGTAAATCGGGTCTTGTACAGCCAG ...:......:...........:..:..:........:..x..:..............x..................x..........x........x.....:..::.....x.:.....:.....x.....:.....:...........x..:..x........:..:.......----.....xx.:xx....:...x.:x:x...x... 177M4D32M 171/209 81.8% 209/94230402 0.0% 4/209 1.9% 33951309 NA +10122 chr4 + 190214555 77028607 77028606 77028788 182 TTCGTTTGTGGATTTTCAATAGTCTTCAGGAGACATATGAAGCAAAAAGGAATGAATTCCTGGGAGAACTGCAGAAGAAAGAAGAAGAAATGAGACAAATGTTTGTTATGAGAGTGAAGGAGAAAGAAGCTGAACTTAAGGAGGCAGAGAAAGAGGTAAGCCATCTGTCCTGCTTCAAGGGA chr4 - 94230402 43073670 43073669 43073847 51156556 51156555 51156733 178 TTTTTTTCTGTGTTTTCA-CAGTCTCCAAGAGACTTATGAAGCAAAGAGGAACGAATTCCTGGGCGAACTCCAGAAGAAGGAGGATGAAATGAGGCAGATGTTCGTCATGAGAGTGAAAGAAAAGGAAGCGGAATTGAAAGAAGCTGAGAAAGATGTGAG---TATGTTCTAACTCAAAGGA ..:x...x..x:......-:.....:..:.....x...........:.....:...........x.....x........:..:..x........:..:.....:..:...........:..:..:.....x...:.x..:..:..x........x..:..---.x...:..:x:....:... 18M1D141M3D19M 141/178 79.2% 178/94230402 0.0% 4/178 2.2% 33954937 NA +3060 chr4 + 190214555 77029758 77029757 77029821 64 ATATATATATACACACACACACACATATATATACACACACATATACACACATATATACATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x.:.......:..:.:x.::.x::....x......::...:...:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 59509009 NA +3348 chr4 + 190214555 77029766 77029765 77029822 57 ATACACACACACACACATATATATACACACACATATACACACATATATACATACACA chr4 - 94230402 7596413 7596412 7596469 86633934 86633933 86633990 57 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA .....x.::..:...x..:...........:...:..:...x.:......x...:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 69433353 NA +19900 chr4 + 190214555 77030735 77030734 77031244 510 AAAGGATTTTCATTCCATTCACCAAGCCTGTTTTCTTTTTCTCTCCAGCTTCACGAGAAGTTTGACCTTCTAAAGCGGACACACCAAGAAGAAAAGAAGAAAGTGGAAGACAAGAAGAAGGAGCTTGAGGAGGAGGTGAACAACTTCCAGAAGAAGAAAGCAGCGGCTCAGTTACTACAGTCCCAGGCCCAGCAATCTGGGGCCCAGCAAACCAAGAAAGACAAGGATAAGAAAAAGTAAGCAGGTGTCACCCCCCTGTATCG-GGGACCTCTAACAATTTA------------------TTCCTCTTGCATGTCTCTA-----CTTTTCCCATTTACAGACTGGAAACTGGTCCTTTACCAGAAAGATAAAAGCAAGTATTTTCTCTACAGTGCAG----GGAAGATGATGAAGGTTTTTAAATTTTTTTAAAAGGTACACAAAGATTAATTTATAAAACTTTACCACAAT-TGACCA---------AGCAATCAGGCCTGGAGGAACCTGTTGTCTCCAGTAGCATCTTCCACACCAACACTAGGA chr4 - 94230402 43074323 43074322 43074849 51155554 51155553 51156080 527 AAAACGTTCTCCTTTTCTCCTCCAA-TTTATTGTCTCTGTCCTGGCAGCTTCATGAAAAGTTTGATCATCTAAAGAGGACTCACCAAGAGGAGAAGAAAAAAGTGGAAGACAAAAAGAAGGAGCTTGAGGAAGAGCTGAACAACTTTCAAAAGAAGAAGGCAGCAGCTCAGCTATTACAGTCACAGGCTCAGCAGGCAGGTTCTCAACAAACCAAGAAAGACAAGGACAAGAAAAAGTAAGCGGATGTCACCCACATCCTTTGTAGGGCTTATTACAATTTGGGGGGGTTGTTTTTTTCTTTCTTGCTGCATGTCTGTATTTGCTTTTTCCCATTACCAGACTGGAAACTGGGCTTTTATCAGACTGGTCAAATAAAATATTTTTTCTAAAGGGTGGGCCAGGGATATGA-------TCTTAATTTTTCTCTGGAGGAGTG-----------TCTTCAAATCTTGCCAAAATCTGACCAGAATGGGAGAGCAGTCAAATGGTGATG-ACCTGTGTTCTGCC-CAGCATCTTCTGGAACAGCTCTGGGA ...:x:..:..x..::x.:.x....-::.:..x...:.x..::xx........:..:........:.x.......x....x........:..:.....:..............:.................:...x..........:..:........:.....:......:..:.......x.....:.....:x.x..xx.:..:....................:..............:.:........x.x.x:x.:.-:..:.:.x.x.......:------------------...:.x:.........x..-----:..........xx...............x.:....:....xx.:.x...xx..:......:....x..x.::.----..:.x....-------.:....x....:.:x::...x:::-----------.:x.x...::..:...x...-......---------....:...:::xxx..x.-......xx...x.x-:.........::x.x..:.x..:... 25M1D237M1I18M18I19M5I73M4I9M7D24M11D20M1I6M9I18M1D14M1D26M 365/489 74.6% 527/94230402 0.0% 59/489 12.1% 33956412 NA +11456 chr4 + 190214555 77034311 77034310 77034731 421 TTAAATTTTGCTTTGGCTTGTCATGTAG-----AGTAGCCTTCTCAAATTTTTGGTTTTAATTTCTGTC-AATTCCATAATCA--TTGCATGAGCATTCACCATCACTGAATGCTGGTGC------TGTCG---CTCCTAATTTTCCTTTCTTTT--------------TAATTTATTATT------------ATTTCTAACTTTTTTGTTTTGTTTTT-------------------------------------TAACTTGCAGTGCAAGCTTCACATAAAGCCTGGCAAGCCAAGGATGTTCCCGCATTCACCTGCTTTTGCAGTAATATCGTATCTCTGCCATGTGTGTTCTTTAGTTTTATTTTATTTTATTTTATTTTTTTACCCTTCCTCAAACACCAGTAACTATTATTAACTCGTTTTGCTGAATGTTGTTGGGTGGTAGAAAATGATAGAACAAGGGAATAACCGCGAATGCTCTGTGCAGCTGGACTCTG chr4 - 94230402 43077701 43077700 43078167 51152236 51152235 51152702 467 TTATTTTTTGCTTGTGCTTGTCACATAGGCTACAGTAGAGCTC---AGTCTTGAGATTTAATGTCTTTTTAATTCCATAATCCATCTGCATGCCCAGCCACCACAGTGGGTTGCTGGTGTCCGAAGTGTCAGCTCTCCCAGCTTTTCTTGATTTTGGTGGTTTTGATTTTGATTTTTCATTTTGGGTTCTGTTATTGCTAACtttttgtttttgtttttgtttttttgttgttgtttttgttcttttttttttttttAACTTGCAGTGCAAGCTTCACATAAAGCCTGTCAAGCCAAGGATGTTCCTGCATTCACCTGCTTTTGCAGTAA-----TGTTTCTGCCATCTGttttttctttttttctttttttttttgttcattttt------------AACCTCAGTAAC---TATTAACTCATCT-----AATAAC-----GTAGTGGGAACAAGAAGGAGGAAGGGTTGGGTGC-AGGACTTTGTGCAGCAGGAAACTG ...xx........xx........::...-----.....xx:..---.:.:..x:.x......x...x.:-............x--:......xx..x:.....:x::x.:x........:------....:---....:.::...:...xx....--------------.:....x.:...------------...x..........xx..........-------------------------------------................................x.................:.......................-----.:.:........x...x..:.:.xx....x....x....x.x..xx.....------------...x:.......---.........:.:.-----...:x:-----..:..:.:..xx::x..:.x:.:..:x.::x:..-.:x:..:........x...xx... 28M5I10M3D23M1I13M2I35M6I5M3I21M14I12M12I26M37I74M5D51M12D12M3D13M5D6M5D34M1D24M 295/387 76.2% 467/94230402 0.0% 114/387 29.5% 33956610 NA +8941 chr4 + 190214555 77036649 77036648 77036858 210 GCTTTTTTTTTTAAAAAATGTATTGCTTCTGAACTTTTTTCTGCCACTGCTCCCTAGCCCTGTTTAGTTTGTTATTGCTGCTTTTCTTTTTTCTTTCTGTATCTATGCCTTTTTTTCACAGTAGTCCTTGGCTCTGCACGGAATAAATGATACCCTCAAATCTAATTGGATGTGCTTTCGCCTTTGCATGTAAGTACGGTAGTAAGAAAC chr4 - 94230402 43080200 43080199 43080399 51150004 51150003 51150203 200 GTTTTCTCTGCCAAAAGAGACGTTA-----AAACCTTTTTCTCCTCAGTCCCCCGGGCCATGTTTAGCTGGTTATTGCTGCACTTCTTTCTT--TTCTTTACTTACGCCTTTTTT-CACAGTAGTCCCTGGTTCTGCATGGAGTAAGCGATGCTTTC-AGTCTAGCTGGATATGCTTTCACC-CTGCATGTAAGTACCACAGTAAGAGAC .:...:.:.x::....:.x:::..:-----:...:.......x.:xxxx.:...x:...x.......:.x...........x:......:..--....x..::..:.........-...........:...:......:...:...::...:.::..-.:....::.....:.......:..-:.............x::.......:.. 25M5D62M2D21M1D41M1D24M1D27M 148/200 74.0% 200/94230402 0.0% 10/200 5.0% 33956449 NA +9618 chr4 + 190214555 77038041 77038040 77039209 1169 TCTCTGTGTG-GTCCTACAAAAACTGTCCATTCCCACCCCTTTGCT--TTGCCATTTGCAAGAGTCTGGAAT-------TGTCAGGTCTCAGCTTCGAAAAGTCCTGGTTCCACTGACAGGACACATTCTTTAGTGGGAATTAAGACCTACA-AAGTCTAGTTTGTATG--------TAGGTATGAAGGGAATTTTTTAAATAAATTGAAAA----GCTGTGAACAGCATTAGAACT-TTGTCTATTTCTTAATTTTAAAATATGCTGATATGCCTTAAACTGTAGTTGTAGATCCTTGTCATTTTGCTGTTTGAAAATAACCAATGTGTTTTCTAAAACTGTCGTGTAATCTACTTTCATTGTTAATGCAGAATTGTCATATATGTAAGCTGCATGTTAGACATTTGTCTTTTTTAAACTAAAGTAATTGTATTGATGTGAAGCATATCATTTTTTCAAATATGAA---AGTGATCACTTAGCAACAT--GCTTGGTAATTTGGCATCTG---TTAAGGTAGGAGAGTGGTGAACAGATAATCTATGCATATATCACTAGTGCCAAGACATAAAGCGG---GGGAAAATATATTTTTACCCAAACATTATTTGTGTGCCCTTTTTTGTGAGTTCTTTTTAGTCACTGCTTGGTTTGCATATGTACACGTGCTTACTGGATAAAAGAAATAGGGATAAGAGTCTCATGCTTTCCTGCCTCGTGTGGTAGACTTCAAATGGCT---GCCGTCTGGGTTACACCAGTTTCTCAAAGATACGTGCCATGTGGTGTCCTGTACTTCACATATCATGTTATCACCCTTTTTCCCCCATGCCTGTCCCTGTCCACCCTGCCAATTCATGTGCCTTGGTGCCCAGCTGAG-GCATCGTCTTCTTCACTGGCCTCCTCTTCCCTGCTGCTGCT-------CACCCTCCCGTCGAGCTCGAGGAAGTCACCCCATTAACTGACACACTGCTGTTCTTTCACAGCTTGTTGTAGAGAAGCTCCTTTTCTTTTCTTAAGCCATTAAGAATCAAATTTGAATCTGAAC--------CTTTCTTTTTTCTCTTCTGTAGCTTCTTCTTTATGTAACCATCCTGTTGACA-AGCCCTACTCTCTCCTAATGGACATAGAGCATTAGAAGAGCAGGAGCTGTCTGTTCACACGTGTTGGGGAAGAGTTACCTCATT-----------TCCACCATCGCCTCCTGTTCTTT chr4 - 94230402 43081160 43081159 43082150 51148253 51148252 51149243 991 TTTCTGTGTGTGCCATACCAGGTGTGTCCATCTGAACCCAGCTACCACTCGCCCTCTG-AGAAGTCAGCAGTGCACGCTTGTC---TCTCTGC----AAGGGCCCTGGCTGCATTTGCAGCATGCC-----------------AGATCCACGTCACTCTTGTTGGCATGGGACAATACAGATATGAAGGG---TTTTTTAATTAACGGAAAACAAAGCTGTGAACAGCGGTAGAAATATTGTATTTGTATACATTTTTAA-TATTCTGAT-TGCCTTAAACTATAGATGTAGAACTTTATTACCTTGCTACTTGAGAATAACCCATGTTTGTTACTAAACAATTGTGTAACCTACCTACAGTGTTAATGCAAA--TGACATGTATGCA-----TCTGTTAGACATTGTCACTTTAT-----------------TTGATGTTAAAGTATTTTTTTTTTTAATTACAAATTGAATAATAACCTGGCAGCGTAAGCTCACTTCTTTCCCGCGTGTGCTTGAGGC-------------------------TGCGTGCACAAGCAGTGCCGGCACTCGAAGCGGGGAGGGGGAATATACACTGACCCAAACG-----------------------------CTTTGGTC----CTCGAGTTGCCTTTGTGAGCTGGC------------------------------------CTTGCCGCAGCCGTGTGCCGG------GAGGGCTGAGGCGGTGCGGG----------------------CGCCCCGCGGGCTGTGCCGTGC------TGTCATGCAGTCTCCGTATG---CTCGTGTTGGTGTCCGTCAGTCGC-----------TGCCTTGTGGCCGTCCCGAGCGCTGTGTGTGCT---CAGGCCT--------CTGCTGTGGTTTGGATGACGCCTCCCCGGCACGCTC--------CCTTCCTTCATGCTTCAAAATGCTGTCCCTCC------------------TTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAACGCCAT-TTGCCACAGCCCCGTGCTCTCCCAGCGGACGGCGGGCGCCGGATGAGC-----CCGTGGGCCCCCGC-----CGGGAGAAGCCATCTCATTCCTCCATCTCGTCCACCCTCCTCTCCTCCCTTTT .:........-.:.x...x.::xx.......::xx....xx:.:.:--.:...x.:..-.::....x.x.:.-------....---....x..----..::.:.....:.x..:.x:...x.::.x-----------------...:.:..:-x.x...x...x.:...--------:..:.........---.....x...x..:x.....----............:x.....x.-....x.x.x.x.xx.....x..-...x.....-...........:...x......x.:..:.:.::.....::....:.......x....x.x..x:x....x:.:......:....:.x..x..........:.--..x...:....:.-----:x...........xx:x:...x.-----------------.......x..:xxxx.:x......:..x..::..---.:.:..x..:.:...:.:.--...::x.xx...xx.::x..---..:...:-------------------------...:.::.:x.x:......::x..x::......---...::......:x:.x........:-----------------------------:...:...----..:.:x....x.x...:x:.xx..------------------------------------...x..xxxx:......x::.------:.x....---..x..x:...----------------------..:x..::.x.x...x.:..:.------.:.....:x:..x..x.x.x---.:.:..::x..x:.:...x::.x:-----------.......xx...xxx.:...-..xx:..x.x..---.x.....--------......:x.:.-------.:..::....x.:x....--------.x::..x.:.xx:xx..x.x......:.:.:.------------------x:.:.:...:......:xx:..x.:x:x:x..x.x..:..x.......--------......:.:.:::::.................x.....x.::.x.-...x..-.....:::x......:.::....:xx.:..::::..x....-----.:..xx.::.x.:.-----x....::..::.:......-----------......x..x:.....x:::... 10M1I35M2I10M1D13M7I4M3D7M4D29M17D9M1I16M8I13M3D19M4I21M1I22M1D9M1D102M2D13M5D23M17D34M3I19M2I20M3I7M25D33M3I25M29D8M4D24M36D21M6D7M3I10M22D22M6D20M3D24M11D20M1I12M3D7M8D11M7I18M8D32M18D48M8I45M1D6M1I41M5D14M5D19M11I23M 614/925 66.4% 991/94230402 0.0% 310/925 33.5% 33956881 NA +34639 chr4 + 190214555 77047786 77047785 77048679 894 TATAGATCAACATGCATAAAGTTCAGTAACTATTAAATGGAGAAGCAAGCAAAAGCAACAGGAAAATTAAATCAGGATGCTGAGGGGGAACAG---------GATTGCTGGCCATGAATTTT-----AATTGAATTTTTGACG------------------GGGCAAGCTACGTTACATTATGGCAGAAAAAAAGTGCAACTGACA-TACTACAAAGAGAT-------------TTTTTAAGTTTAAAAAAAGTTTGGATCTTTTGGATTTCTTTTT---------TTTTTTTTTGGTCTTTATGTGCTTAAATAACGCTGAATTATAATTAGCCACACAAATAATGAGAGTTTTAT---------------TTTTTTTTTCTGGCTCACTCCAAATCAGCCTGTTAAGGTATATTTCCTTCTACAGCCTTTCCTGATTTTGCATGTTCTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGA-AACTACATGACAGAAACAGGCTGCAAAGGTGGACAAGGGGAAGCATGTCCCTCTTGTCTTGATAAATCAGTGCCACACACAGAACCCACATTTTC---------------TGAGACATTATCTTCATTATAGAGCCGTTTGATTCCATCATAGAAGTCATCCACTTCCATTTCCTCTACTTTGCGTTTAGTAGAGGTCTGCTTGCACCCACTGGCAGCTGGGAGATGATGGTAAAAGGCTGCTGTACCTCTGACTGGCACTTCTGGCTTGCTGTTGTCCTTGGAGAAGTCTGGGCCTGGGACAGAGGAGGGATGTAATCTGAACACTCCTTTGTCACAGGTCACCAGGGTGTGCTTGAGGGGACGGTAGACATAAACGGAATTCAGAGGCAGGGAAGACTGCAGAGTAGAAAGGTGATGTGCCACAAGCTCCCGACAATGGATCAACTGGGAGCTATCCATCTGGGCCAGGAAAAAAA chr4 - 94230402 43087326 43087325 43088268 51142135 51142134 51143077 943 TACAGAACGTCATGCACGAGACTGGCTGACAATTAAA-AGAGGAGCAAGCAGAAGGGGCGAGGA--------------GCAGATGGGAATCGGACCGGAGGTGTTCACTGGCTGGGAAACCTGAAACAACCGCACAACTGATGAGAGCTCTCGGACATGGAGGGTGGGTTACAACACGCGGGAGCAGAAAAACAGTGGAGCTGACAACACTAGAAAGAAACAAATTCTGGCTACTTTTTTTGTTTG------GTTTT--TTTTTTGGGTCTTTTTTTAGATTTTTATACTTTTTTGTGTTTTAAGTGCTTAAATAGTG--GAACTAGAATTAGCCGCACAAGAAAACAAAAATTCAAGAAAGGGCTGGGATATTCTTTCTGTTGGCTCCCTTCAGTTCAGCCTGACAAGGTATGGTCCCTTCTCCCCCCACGCCAGGTTCCGCGTGGCTTCGCACGCGTAG----CTGCGGTG--------CGGCAGGTGGTGTGTGCTCACAGCTACATGACGGACACTGGCTGTAAAGGCGGACAAGGGGAAACGTTGCCCTCCTGCCTCGAGACGTCAGCGCCGCAAACAGAGCCCATGTTCTCGAGAGCCACTACCTCTGGAGCAGCGTCTTCGTTGTAGAGACGCTTGATTCCATCGTAGAAGTCATCCACTTCCATCTCTTCCACTTTGCGCTTGGCAGAGGCTTGCTTGCAACCGCTGGGAGCTGGCAGACGCTGGTAGAGCGCGGCTGTAGCTGTGACCGGCACTTCTGGCCTGCCGTTGTCCTTGGAGAAACCTGGCCCTGGGACAGAGGAGGGCTGGCATTTGAACGCTCCTCTGTTACAGGTCACCAGGGTATGCTGGAGGGGACTGTAGACATATACAGGATTGGGCAGCAGAGAAGACTGCAGAGTGGAAAGGTGATGTGCCACGAGCTCCCGGCAGTGGATCAGCTGTGCGCTATCCATCTGGAACGAGGAGACAA ..:...x.:x......::.:::.x:x.:..x......-:...:........:...x::.::.:.--------------..x..x...:.x.:.---------.x.::.....::x...x::.-----..::.x.:xx:...:.------------------...:::.:...:x:..::x:x:.........x....x.:......-:....x.....:.:-------------.....xx....:------....x--.:......:.:.:.....---------.x:.......xx:....x...........::.--...:..x........:.....:x..xx.:.:x..:.x---------------..:...:.x:......x..:..:x........x:.......:x.:......x.xx..x:x..x.:..::..:..x::..::x.x.:x..----..:.xx.:--------:x:x....:.:::x..:.x.-.:.........:..x..x.....:.....:............:.:.xx.....:..:..:..x.x:....:...:..x.....:....::..:..---------------..:::..x::.....:..:.....x..:...........:....................:..:..:........:..:.:.....::........x..:....x......x...:.x.....:.:x..x......x..x....:............:...:...............::....x.................x..xx..:.....:.....:...:...............:....x........x.........x..:.:...x:.x:....:..............:.................:........:..:.......:...x.x.............:x.::.:.:.x.. 37M1D26M14D15M9I20M5I16M18I45M1I14M13I12M6D5M2D18M9I32M2D37M15I89M4D8M8D20M1I95M15I368M 624/857 72.8% 943/94230402 0.0% 123/857 14.4% 33960460 NA +15043 chr4 + 190214555 77055956 77055955 77056339 384 ATTTACAATATGAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTCAAAATTTCAGATGAGGAACATCCACAGAAACTGTCTCTTGCCAATACCTTTAGTACTGGAATTCTCTAT-----CCAAAGCAAAGGGGAACAGGGACAGGGA---------GAAAAGGACAGAAAAGAAACTCATTTATGATTTTTGTTTTAGCAAACG-----------AAGCAAGTTAAT---AAATGTGGAGAGAA-ATTTTCA-------CGGAAGAAACATTATCTTGAAAGGATTTATTACCTCATCTTCCTCAACAGTCTTGGCAGCTAGGAAAAAACAGCTGATTGCAATACAACTCAAGTATTTTGGATGAGCCTAAAATTTTGAAGAG chr4 - 94230402 43089923 43089922 43090332 51140071 51140070 51140480 410 ATTTACAATGTGAAGGAAATCCAGTGGCGTTGCCATGTGAAGATCCCAGTTCAGTTTATCCAGGATAATCTTCTCCATTCTGCGAATTTCAGCTGGAGAACAACCACAAAAGCTATCCCGAGCCAACACCTTCAGTACTGGAATCCTCTACAGCAGCCAACACAAAGAAGAAAAGAGAAAACCAATTATTATTATAAAAATCATAAAAACTGCTCC------GTTCCTGTCCTGGCAAGCGTCAGCTGCCACACGCAAGCAAAGGCAGGATTTGAAAAGCATATATTCAGACAATGCTAAGGTAGAACGACAACAAAAAG----GTTACCTCGTCTTCCTCAATGGTCTTTGCAGCAAGGAAGAAGCAGCTGATTGCAATACAGTTCAAGTATTTTGGACGGGCCTACAATACAGAATAG .........:.....:.......:...:..x..::.............:....::........:.....::..........xx:........x..::.....x.....:..:..:..:.xx.....:.....:...........:.....:-----....x:.....::...x..:..x.:xx.---------:x...::x..x....:xx:...x------:..::...::.:....:..-----------.x.....:x..x---::..x..:.:..x.-..x....-------.x:.:.x.:x.:x.:xx::...:.----:.......:..........::.....x.....x.....:..:.................::..............:.:.....x...x:x...x.. 151M5I28M9I23M6D19M11I12M3I14M1I7M7I24M4D96M 274/374 73.3% 410/94230402 0.0% 46/374 12.3% 33966033 NA +9329 chr4 + 190214555 77058490 77058489 77058649 160 TATCTTAAAACACTTACCTTTACGGTAGCTAAAAACCTATCCAAAAGACTGCTAGCCAGAGCAAATGTTTCTGGGTAAAGGTTGAATTGGTACTTGAGTTTGGCCAGCCATTGAATTACTTCATCTCTCTGGGATGGAGAA------ACATTCTATAAGGGAACAA chr4 - 94230402 43093162 43093161 43093327 51137076 51137075 51137241 166 TATTTGCAAATATTTACCTTTACCACAGCTAAAAACCTGTCCAAAAGGCTGATGGCCAGGGCGAGTGTTTCTGGATAAAGGTGGAACTGGTATTTGAGCTTGGCCAGCCACTGAATGACCTCATCCCTCTGCTTTGGAGAAATGGCTACATCCTGTTGGAGAGAAA ...:.xx...:.:..........x::............:........:...x.:.....:..:.:.........:.......x...:.....:.....:...........:.....x..:.....:.....xxx.......------....:..:.x:.:..:x.. 141M6I19M 126/160 78.8% 166/94230402 0.0% 6/160 3.8% 33965328 NA +10663 chr4 + 190214555 77066235 77066234 77066421 187 AGAAAAATCATTACCTGATTTGAAGGCATTTTCCGCACATTCACTTTCCACATCTGTGCTTCCCTAGTGATTGCCTTTTCCAACAGGAAAGACAATCTCTGGTTTTCCAAAGGCCCTGGAAACTTCATGATATCCTTTGGATCTGCCTGCTACCCAGCTTGCTGTAGCTACCTACAGAATCAAGTAA chr4 - 94230402 43101114 43101113 43101300 51129103 51129102 51129289 187 AAAAGAGACGTTACCTGATTGGGCTGAATTTTCGGCACATGTGCTTTCCACATTTGAGCTTCCCTAGAGATTGCCATCTCCAGAAGGAGAGACAACCTCTGGCTCTCCACGGGTCCCGAAAACTTCATGGTGACCCTTGGATCTGCCTGCCACCCAGCTGGATACAGCTACCTGCGAAAGCAAAGAA .:..:.:x.:..........x.:xx.x......x......x::..........:..x..........x.......x.:....:x....:......:......:.:....x:..:..:.:..........:.:x..:..............:........x.x.::........:.::..x...:x.. 187M 142/187 75.9% 187/94230402 0.0% 0/187 0.0% 33965121 NA +3095 chr4 + 190214555 77075876 77075875 77075939 64 GGAGGGGAGAAAAGAAAAGAAAAAAAAAAAAAGAAAGGGGAAAGGGGGGA----AAAATAAGAAAAAG chr4 - 94230402 40472541 40472540 40472608 53757795 53757794 53757862 68 GGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAG ..:..::.:.........:..::........:..::....:::......:----..:.x:x....... 50M4I14M 46/64 71.9% 68/94230402 0.0% 4/64 6.2% 36603335 NA +3220 chr4 + 190214555 77088365 77088364 77088446 82 TGCAGTCTCAACTTCCTGGGTTCAAGTGATCCTCCCACCTCAGCCTCCGGAGTAGCTGGGACTATAGGTCTGTGCCACCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG .:...:.:x..x:.:.............x.:.x.xx:x........::x:.........:....:.x.--..::....::.. 68M2D12M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 58891238 NA +3105 chr4 + 190214555 77102688 77102687 77102776 89 ATATTTTCATTACTTGGAAGAAAAAAAT-------GCTCTGTAGATGTCATTTTTCCTTAAGAAATAAACAAATGAATACTAAATGCAACTTAAGT chr4 - 94230402 20723167 20723166 20723259 73507144 73507143 73507236 93 ATATTTATGTCA---GAGAGAACAAGATTTGTAGAACTGTGTTCATATCATTGTACCTCAAGAATTAAACAAATGAAGACTAAACTAAACTTCAGT ......x::.:.---.::....x..:..-------:..x...xx..:.....x.x...:.....x............x......:xx.....x... 12M3D13M7I61M 64/86 74.4% 93/94230402 0.0% 10/86 11.6% 56379521 NA +3156 chr4 + 190214555 77105484 77105483 77105572 89 TTTCCAAATGTGAGAAATGTGAGATCCTTTTTTGCCTTTCTTTTTTTTTCTTTTTTCTTTTCTTTTCTTTTTTTTTTGAGGCAAGATCT chr4 - 94230402 64684311 64684310 64684395 29546008 29546007 29546092 85 TTGCCTAATGGCTAACATTTGAG----TTCTTAGCCTTTATCTATTTTTCTTCTGTCTTTTTTTTTCTTCTCCTTCTATGTCAAAGTCT ..x..x....xxx:.x..x....----..:..x......x.:.x........:.x......:.......:.::..:.:x.x...::... 23M4D62M 60/85 70.6% 85/94230402 0.0% 4/85 4.7% 12421173 NA +3256 chr4 + 190214555 77126536 77126535 77126610 75 TTCTTTTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTTGCTCTGTC chr4 - 94230402 50770959 50770958 50771033 43459370 43459369 43459444 75 TTCACTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATTTGTC ...x:.x...:..............xx.:.x.....x...x.............:x:.:.xxx:...xx.:.... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 26355577 NA +3076 chr4 + 190214555 77126541 77126540 77126585 45 TTCTTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 86355157 86355156 86355201 7875202 7875201 7875246 45 TTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAAGTATTTTCT ....:.............................xxx.x....:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% -9228616 -85001786 +3217 chr4 + 190214555 77126545 77126544 77126580 36 TTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................:.................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 58196633 NA +3055 chr4 + 190214555 77135085 77135084 77135135 51 TGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x.....:.::.:........:....x.x........:....... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 29045588 NA +3117 chr4 + 190214555 77135089 77135088 77135141 53 TGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATTA chr4 - 94230402 48089497 48089496 48089549 46140854 46140853 46140906 53 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTA ...:x..x...:...::::........:....x.x......:........... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 29045592 NA +8884 chr4 + 190214555 77159355 77159354 77159509 155 TTTTTATTGCAGAATGATAACACTTTGTGTCCAGGATTGAGAAATGCCAAAGTTGAAGATTTAAGGAGTTTAGCCAACTTTTTTGGATCTTGCACTGAAACTTTTGTCCTGGCTGTCAATATTTTGGACAGGTTCTTGGCTCTTATGAAGGTATT chr4 - 94230402 58060922 58060921 58061076 36169327 36169326 36169481 155 TTCTTGCTGTAGAATGAAAACGCTCTGTGCCCGAGACAAAGGAATGCCAAGGTGGAAGATCTCTGGAGTCTGACCAACTTCTTTGGCTTTGCAACTGAAACGTTTGTTTTGGCTGTTAACATCCTGGACAGATTCCTGGCTCTCATGAAGGTACT ..:..::..:.......x...:..:....:..::..:x:..:........:..x......:.xx.....:.::.......:.....x.:.xxx........x.....::.......:..:..::.......:...:.......:.........:. 155M 116/155 74.8% 155/94230402 0.0% 0/155 0.0% 19098433 NA +19104 chr4 + 190214555 77160702 77160701 77160999 298 CCTCTTGTTTTTTTCTCAGGTGAAACCTAAACATTTGTCTTGCATTGGAGTCTGTTCTTTTTTGCTGGCTGCTAGAATAGTTGAAGAAGACTGCAATATTCCATCCACTCATGATGTGATCCGGATTAGTCAGTGTAAATGTACTGCTTCTGACATAAAACGGATGGAAAAAATAATTTCAGAAAAATTGCACTATGAATTGGAAGCTACTACTGCCTTAAACTTTTTGCACTTATACCATACTATTATACTTTGTCATACTTCAGAAAGGTCAGTGGGATTA------AAGATACATTTTGTA chr4 - 94230402 58062099 58062098 58062397 36168006 36168005 36168304 299 CCTCTTATTTTT-----AGGTGAAACCGAAGCATTTGTCTTGCATTGGAGTTTGTTGTTTTCAACTGGCTGCCCAAGTGGTTGAAGAAGAATGCAATATTCCATCTGCTCATGAGATTATCCGGATCAGCCAATGTAAATGCACTGTGTCCGACCTGAAACGGATGGAAAAGATAATTTCAGAAAAGTTGCACTTTGAATTTAAAGCTACTACTGCCTTAACCTTCTTGCACTTGTACCATACTATTGTACTCTGTCATACCTCAGAAAGGTGAGTTGAATTGTATGTCAATATTCAGTTTGCA ......:.....-----..........x..:....................:....x....:x:........:x:.:.:...........x..............::.......x:.x........:..:..:........:....:x..:...x.:..............:..............:.......x......x:..................x...:........:............:....:........:..........x...x.:...:------..x..x..x....:. 12M5D266M6I15M 246/293 84.0% 299/94230402 0.0% 11/293 3.8% 19098603 NA +11362 chr4 + 190214555 77161475 77161474 77161751 277 TATAGGAAAGAAATACTGAGCCTTGATAAACTAGAAGCTCAGCTGAAAGCTTGCAACTGCCGACTCATCTTTTCAAAAGCAAAAGTAAGTCGATTCCTTGCTTATGTATATATCTCACAGTTTGTATTTTGAATTT--TTAAAAAATATTTTTCTTTTTTTTCTTTTTTCTTACAGCCATCTGTATTAGCCTTGTGCCTTCTCAATTTGGAAGTGGAAACTTTGAAATCTGTTGAATTACTGGAAATTCTCTTGCTAGTTAAAAAACATTCCAAGGTAA chr4 - 94230402 58062521 58062520 58062788 36167615 36167614 36167882 268 TGTAGGAAAGAAGTATTGAATCTTGACAAATTGGAAGCACAGCTAAAAGCTTGCAACTGTCGTCTTGTCTTTTCTAAAGCAAAAGTAAGTAG-----------AAGTAGCTTTTCTCTGACTTCCATTTAGAGTTCAATTAAAGCATGCTGAGCAGCATTTTTATTGTCATTCTAGCCTTCTGTCTTGGCCTTGTGCCTTCTCACTCTTGAAGTTCAATCTTTGAAATCTGTTGAGCTGTTTGAGATACTTCTGCGTGTTCAAAAGCACTCAAAGGTAA .:..........:..:...::.....:...:.:.....x.....:..............:..x..::.......x...............x.-----------.x...xx.x.:::x::::..x:....x..:..:--.....:x..::.xxx.xx:x....:x..x.:x..x:....x.....x..:................x.:.x.....xx..x................::.::.x..:..x..::...xx...x....:..:..x....... 92M11D33M2I141M 191/266 71.8% 268/94230402 0.0% 13/266 4.9% 19098954 NA +14777 chr4 + 190214555 77164267 77164266 77164484 218 TTTTCAGATTAATGACACTGAGTTCTTCTACTGGAGAGAGTTGGTTTCTAAATGCCTAGCCGAGTATTCTTCTCCTGAATGTTGCAAACCAGATCTTAAGAAGTTGGTTTGGATCGTTTCAAGGCGCACAGCCCAGAACCTCCACAACAGCTACTATAGTGTTCCTGAGCTGCCAACGATACCTGAGGGGGGTTGTTTTGATGAAAGTGAAAGGTAGG chr4 - 94230402 58063688 58063687 58063905 36166498 36166497 36166715 218 TTTTCAGATAAGTGATTGTGATCTCCTTTACTGGAGGGAACTGGTCTCAAAATGCCTGGCAGACTATTCTTCTCCTGAATGTTGCAAACCTGATCATAAAAAGCTAGTTTGGATTGTTTCAAGGCGTACAGCCCAGAATCTACAGAACAGTTACTACAGTGTTCCTGAGCTGCCAACAATACCAGAGGGTGGCTGTTTCAATGAAAGCGAAAGGTTGG .........x.:...:xx...x:..:.:........:..::....:..x........:..x..x..........................x....x...:...:.:........:...........:...........:..x..x.....:.....:....................:.....x.....x..:.....::.......:.......x.. 218M 181/218 83.0% 218/94230402 0.0% 0/218 0.0% 19100579 NA +6700 chr4 + 190214555 77165732 77165731 77165922 191 TTGGCTATA------AAACATTTAAGT------GTGTTTTAAGTAATGGTATCCTCTTTTTTTGTCTCTTTTTCTCTTTAGTGAGGACTCTTGTGAAGATATGAGTTGTGGAGAGGAGAGTCTCAGCAGCTCTCCTCCCAGTGATCAAGAGTGCACCTTCTTTTTCAACTT-----------CAAAGTGGCACAAACACTGTGCTTTCCATCTT chr4 - 94230402 58063902 58063901 58064113 36166290 36166289 36166501 212 TTGGTTATACTTTCCAGGCATTTAAATTGTGGGGTGTTCTCATTATCTGGAAATGCTAATCTTTCCTACCGTTCCTTTTAGTGAAGACTCCTGTGAAGATATGAGCAGTGGAGAAGAAAGCCTTAGCAGTTCTCCTCCTAGCGATCTGGAAGGCTCCTTCTTCTTTGAACTCAAGCCTAAAACAAAGTGG--CAAACTCTTAATTCTCAGTCTT ....:....------.::.......:.------.....:.x.x..x:x.x.xx:x..xx.:..x:..x::x...::........:.....:..............:x.......:..:..:..:.....:........:..:....x:..:x..x.......:..::.x:.-----------........--.....x..xx::.:..x:.... 9M6I12M6I138M11I8M2D22M 134/189 70.9% 212/94230402 0.0% 25/189 13.2% 19101830 NA +3306 chr4 + 190214555 77179002 77179001 77179077 76 CAACCTCCACCTACCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCACCAC chr4 - 94230402 18197129 18197128 18197202 76033201 76033200 76033274 74 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:xx.x..x.::........:.x...x..x.x........::x:.........:.:....--:......... 64M2D10M 54/74 73.0% 74/94230402 0.0% 2/74 2.7% 58981873 NA +3055 chr4 + 190214555 77365939 77365938 77365983 45 TGCCTGGCTAATTTTGTACTTTTTTTTTTTTTTTTTTAGTACAGA chr4 - 94230402 84127254 84127253 84127298 10103105 10103104 10103149 45 TGCTTGGCTGGTTTTGTCTTTTTTTTTTTTTTTTTTAAGTTCAGA ...:.....::......x:.................x...x.... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% -6761315 -87469087 +3073 chr4 + 190214555 77380463 77380462 77380532 70 ACCAGAGGGCTCCCCAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAACAAAGACCATTGTAATGCA chr4 - 94230402 50482922 50482921 50482991 43747412 43747411 43747481 70 ATCATCGTGCCATCTGGGCTTTTTTTTTTTTTTTTTTCCTCTTTCTGACATCAGCAATCTTCATAATGCA .:..xx.x..:x:.::.....................::.:...:.:.:.x..:x:.:.x.::....... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 26897541 NA +3299 chr4 + 190214555 77573360 77573359 77573428 69 TTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTCTAAATGTGTTTT chr4 - 94230402 81428428 81428427 81428496 12801907 12801906 12801975 69 TTTTTTGTGTGTGTGTGTGTGTATGGTCATGTATACGTACAATTGTGTTTGGATGTTTAAATGCCTTCT ....x.................:..xx::...:.::..:::xx.....x..x....:......:x..:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% -3855068 -90375334 +3213 chr4 + 190214555 77580237 77580236 77580353 117 CAATTTTATACAAATAAATTTTAAAATAAAGAATATAGAATATATATTTTTTAAAAAGACAAGTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 - 94230402 63226411 63226410 63226527 31003876 31003875 31003992 117 CGATTTTTTACTGGTGTCTCTCTGCAAGAAGAATCTGTAACTGATATAACTTGAAAAAACAAATTCCATTTTTGAAATTTTGGTCATCTTTTTTTTTTCTTTTTTTTTTTACAAGGA .:.....x...x::.:xx.:.:x:x.x:......x.:x..:xx....xx:..:....:....:..::x...:.xxxx....xx.:x.:..........:..........x.x.x... 117M 73/117 62.4% 117/94230402 0.0% 0/117 0.0% 14353826 NA +3408 chr4 + 190214555 77580278 77580277 77580437 160 ATATATTTTTTAAAAAGACAAGTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA------GATGGAGTCTCTCTCTTTCACCAGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAA--CCTCTGCCTCCCGGGTTCAAGCAATTCTTC chr4 - 94230402 38448706 38448705 38448856 55781547 55781546 55781697 151 ATAAATTTTTTAAAAATACATGTTCACTCAAGTTCTGTTTTCTCATCTTTTTGTGTTTTTTTTTTTTTAATTGACTGAAAACATTTTTATTGTTCA----------------TGGTATAA-AACAGCTAGCTGCAATGCTTCTGCATCCTGAGTTTCAGACCTTCTTC ...x............x...x...:x..:xxx..:.x....:.:x.:.....x.x.............:.------..x::x:.:.:.x.:x....----------------....::..-xx::...x:......--.:.....x...:.:...:x..xxx...... 70M6I20M16D8M1D15M2I30M 98/143 68.5% 151/94230402 0.0% 25/143 17.5% 39131572 NA +3327 chr4 + 190214555 77591551 77591550 77591624 74 AAAAAAAAAAAAAAAAAAAAAAAGTTTCTCAAATTTTAGCAACTATCATAATCACCTGGGAAGTGAATTAAACA chr4 - 94230402 4540010 4540009 4540083 89690320 89690319 89690393 74 AGGAAAAAAAAAAAAAAAAAAACAATTTCCAAATGTTATCAATTCTCCCAGCAGCTTGGAAAAGGAATCAGACA .::...................x:x..::.....x...x...:.x..x:.::x:.:...:..:x....:.:... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 73051541 NA +3087 chr4 + 190214555 77609245 77609244 77609358 114 TTTGTCTTTATTGTTTT----GGGGTTTTTGTGGTTTGTTTCTGTTTTTTGTG-TTTTGGGTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGAGACAGGATCTCACTCTGCTGCCCAGG chr4 - 94230402 50147634 50147633 50147752 44082651 44082650 44082769 119 TTTTTTTTAATAGTTTTCTATGAAGTAACTTAAGTTACTTCAAGTTTTTCCTGAGTCCAAGTTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCTTCTGCACTGG ...x.:..x..x.....----.::..xx:.xx:...xx..:xx......:x..-x.::::....................xx..x.x....xx.....:.x.:...:..x....x.x.. 17M4I32M1I65M 77/114 67.5% 119/94230402 0.0% 5/114 4.4% 27461611 NA +3476 chr4 + 190214555 77609388 77609387 77609461 74 CTGCAGCCTCAACCTCCTGGGTTCAAGCAAGCCTCCCTCCTCAGCCTCCCGAGTAGCTGGGACAACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..x..:...........::xx:.x.xxxx........::.:.........:..x...x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 59412262 NA +3038 chr4 + 190214555 77615095 77615094 77615144 50 AACACTTGAGGCAAAAAAAAAAAAAAGGGAAAAAACCTCTCCCAAAACCT chr4 - 94230402 32492201 32492200 32492250 61738153 61738152 61738202 50 AACACTTAGGGGAAAAAAAAAAGAAAGAAAAAAATCTCCTCCCAAACTCT .......::..x..........:....::.....x.::........x:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 45122894 NA +3009 chr4 + 190214555 77618098 77618097 77618149 52 CAAATCCATTCAGAAGAGGTTAGATGAGGAAACTAAGGTTCAGAGAGGTAAA chr4 - 94230402 57102507 57102506 57102558 37127845 37127844 37127896 52 CAAAGCACTTCAGAAAATGTCAAATGAGGAAACTGAGGTACAGAAAGGAAAA ....x.xx.......:.x..:.:...........:....x....:...x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 20515591 NA +3094 chr4 + 190214555 77621276 77621275 77621347 72 CTTGATTGATAAGCTTAGGTTTTGTTTTGTTTTGTTTTTTTTTTTTTAAGTCCTTTTCTTGTATCATCTCAG chr4 - 94230402 85438331 85438330 85438402 8792001 8792000 8792072 72 CCTACTTAATCATGTTGGGTTTGGTTTTGTTTGTTTTTTTTTTTTTTTTGGCAACTTCTTGTGTTATCACAG .:.:x..:..x.xx..:.....x.........xx.............xx.x.xx:.......:.:...x... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% -7817055 -86413347 +3234 chr4 + 190214555 77702446 77702445 77702506 61 TCTCCAGGTAAAGAGAGTTTAAAGACTAAGTGTATGATGAGGGAAACAAAGGACAAGGGTA chr4 - 94230402 41557059 41557058 41557119 52673284 52673283 52673344 61 TTCCCTGGTAAAGAGAGCTTACAGGCTAAGTAGATGATGAGGGACATAAAGTGGAAAAGCA .::..x...........:...x..:......:x...........x.:....x:x..::.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 36145387 NA +3091 chr4 + 190214555 77708183 77708182 77708224 42 TGTATAATAGATTTCTCTCTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 28058664 28058663 28058705 66171698 66171697 66171739 42 TGCCTTATAGATTTCTCTCTCTTTTTTTTTTTTTTTTTTAAG ..:x.x..............:..................:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 49649519 NA +3198 chr4 + 190214555 77709312 77709311 77709394 83 CTGCAACCTCCATCTCCCAGGTTCAAAAGATTCTCCTGCCTCAGCCTCCCAGTTAGCTGGAACTACAGAAATGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx.x..:.::.......:x.x...x.xx.x........::..:x.............--.x:........:::. 66M2D15M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 59512186 NA +3140 chr4 + 190214555 77714409 77714408 77714467 59 AGAGAGAAAAAGTACATACACACTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 59582151 59582150 59582209 34648194 34648193 34648252 59 AAGGAGAGAGAGAACATTCACAGCTTCCTCAAAAAAAAAAAAAAGAAAAATTAAAAAGA .::....:.:..x....x....x::..:.:..............:.....xx.....:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 18132258 NA +103488 chr4 + 190214555 77716734 77716733 77720675 3942 AAAAAATAGGGGCAAATAAGAAACAGCTTTTATATTTTTGCCAACTACACTAAAACACAGTGGCTTCTTTAATACATTCACACAGGATGCTAATTAGTAAAATTAAATACCTGCCTATGAATATCAGAAAAGTAATTTGAAAAGAAAGAGCTTGGAACAAGGCAAATGGGAGGGGAGGAAAAGCTGGTCTCAGAACCCATTGTGCCATACCTGACTTCAACATGTGATATTCAAACGAATGTTCACACGCCTTACATCAAAGAAATGAAACAAAAATATTCAGCTATGTTATTATACAAAATTTTTTTT---------------------------ACATAAAACATCATAAATCTGGAACAGATTTACTATATCTGAATTCTAAAAAGTTGCCTATAGAATGGTGCTGGGATTCTGTTCTCTGCTTGCTTTTAGGCAGTGCTGTTGCTTAAAAGTTGACACCAGGCACAATATT-TTAAAACAAAATCAA-CGAGCAAGGAGCAGTAGGTGGATCTGAGCCTTTCCCAGATGTCAGGCC-TGAGGATGCTGCAATATTCCCCATCAAAATGTGTAAAGCTATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGACTGTAA--------TAATGGCAAACAGTACAGTTTTCTCTTCCTCAAACAATACTGTTTTAGTAAATTTTAAGAACATTCCGGTTCTTAGACAAATATCGAAATAATATTTAACAGTTTTAAAAAAACATGTATCACATTCTAAAAATGCCCAGATTTTCTTTTATCTTCTGATTAAAATATGCAGCAGCCCAATGGC-ATAAAGCTTAACTCATTCTGATAACTAGAAAGTATATGAGCATATATATTTTACTTTCATTGAATATATATATATATATGTCATTCACCTCTTCCTTTTGGCTTCTCACTGCCAAAGTTCCAAATGGCATGCGGTTTAACAAGACAATGCTGAGGAAAGCAGCATTTCTGATCATCTGAATTGGCAGCTCAAAACAGA------TACCACTCCTTTTACAAAGGGAACAAAGGGTGAAGGGTATGTGAAATTTGGGCAGTGGGCTAAAGGGAAACCGTGCACATGAAATTTGGGTTACCATGCCCCAAGT---GTGTACCACCCAAAACATAA-CACAATT------ACCTACTTCAA----CAGAGCTACTAC-CAACATTTACTAAAACCACATT---AAAAATACACAGGATAATGAATGGTTTGAAAGAGCGCATTTG-AAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCATACACAAA----ATAAACTTA------AGCTGTTTACAATGTTTCCCATTTTTTTTTATTT----TTTCCCTCTACATTTAACTATTAAAAAAGTTT----------------TTTATTAATAAATGGGCTCCTCTGTGGTTCATATACAATCATAAGTGAACTTTAAATTCCATTTTATACAAACATCTCAAAAAATATTGGGAGTGAAGTATGGTAGGAAATATTGCTCACATTGCTAATTAACATGCGTATATGAAAGGAGGAAAATGTTTTGTTAGTGCATATACCTCCAGAGCAGAAAACCCACCCAAAACAAAAGATCTAAAATAAAACATACAGTAGCTGATTACAAAAAAAGGTAATGTCCACAAAATTAAGTTTTTCATGCTATTCTACTTTCCAGTACTATGCTTCAGG-------TAATCAATTTGCATGGCTAGATGTTGGATACTTGAGGTATATAAGAAGGGAAA--CCTGCATGTTGAGGAAAATCTGTCATCTTAAGGGTTGTTTCTTTTTGTTTGTTTATCCTGGTACTTTAACATTTTTAAAAGATATTTTATTTACATC---AAAATTCACTGAACTACAATGACATTCCAATTATAATAGATGACAAACAACGCCTCTATCACTAGGCACTT--TTAAAAGGGAGTTCAGGCTTTACAGAACCCTTCTGATGCAATCCCATGTATGATATGACATCATCCCACCACCCTC--GTCCCACT-----AAAATTACCCTCTGGGGAAATATTACCTTATATAGCCTGATTAATTT--ACTATGGAAGAAATTA---GCATAAAATGACCAAAGTAAATGCATCATTTAAGACTAATAAAACAGCCGAAGATGTCAGGTTTGAAAGA--GGAGACAAATTGTGTATATTTAAAACTAATTA---AATAATTTAAATTTGACCTATACTTTATATATTAGTGAGACACAAATATAGGCTAT---TGTCTTTTAAAATTTCATTCACATAATGGAAAATTTCTT-GTTTATTAAAAATATCACATTTTGAGACTAGAAACAGTAAAGTGCATGAAAAGTTTAAAATATAAATTTCAGAAAACTCTTATAGCAGCAAAAAAGCAGAATAAAGAAAAACTTAAAAACACAGACACAACCTTTTCCTGTTACTGTGCCATAATT-----AACATCAAGTAGCCAACCAATTTTTCCCCAGAAAACAGTATTCTGTTCACTGCCTCTTGAGTCACA-GATTTTCAACTGGCCCC--------TCCTAGGCAAAAAAAAGATTCCAACATACCTAAAG-GCATCAACAATTGGGAATAAACCAGTAGCTTCTTAATTCAACCCTGACAGACAACTGAAAC-AAAGATTA---AAAGCATATGATGGCCATTTGGCAGCTAGAGTCAGGAAAA-TGACCCA----ACGTTTTCAACTACTGCCCCAAATTTGTTCTCTCTCCCAAATCCTTTGCACTGTCATCTCAAGAAACCAACAGCCACATAATCTATGTTGGAAACACATAAAATATCTGTATGATTTTCCCCATCTGAAACTTTGATCAAGGCCTT---TTTATTCAGCAGACT---TTTTTCTTCTTTTAACATTTGACTATAATGGCAAAAATGACATAGGTCATAT----AACATCTGTTTTCCTGGCACAACCAGACAGAAGGTTGAATTGGAAT-----AAGGAAAAATTCATTCCGTGG---GCATCCTAAACATACCAC-------------ATTCTATTTT--CAAGGTA----------TGT--------GGCAATACAGATTACTTACTTTTTCTCTATAAATAAA-------CTTGAGAG-------ACAGGCTTAGAATTAATACTTCCAATAAGGTTATATATAAAGGACAAAAAAACCAAAGT---GATTCCTCAAAAAAAC---TCCAAACCAGCATTTG----GCCAAC-AAATTG--TCATGTGGTGTTACAT-GCTGGATTATAAAAGTATACTGTGCAACCATCTTTAATTTTTCAAATTTTCTTA-----CCATGTATAGAGGCTATATCATAGTTTATGGACTGAACAAGTAAATTTAAGTACTCTGTTAATGTGCAAA--TGACTTTGGAATCCAAAAGTCAGT------------TATAAAGGAAAAATTCAAGGTTTTCCCTGGAAGGCATATCATCATTCAGTTTAAAATACTGTATTTATAGTTTTTAAAAATTGCCTTTTATAAAATGGTTGGCTCACTGAAAC-CATTC--AAAAGAAAGTATTTGTTTTGGAAAAACAAATACACTGTTATTGGGCCTCAAATTGGTAATTTATCAATTTTGAATGCTGGCTGTTAATACAATATAAAGAAGGTCCAATTTAAAAACATG------TTAAATTAAAATTTTGTAAAGAGAGTAATACTTTGGTTCCAGCCCTACTGCCAAATGATACCAATATGCACAAAAATGTACAAAGTCTTACAGCAAACACATAATGAAAGAAACCTGAAGAAGCAGCTTAAGGATGGCCATACTTCACTCCTACATACTTTGATTTACAACTGTACAGGTCCATAGCAACAGATCCCCGTCT-TGGCGGGGCAGTACTCCACTACCTCCGATTAGGCAAGTGAACACCATTGACAAGAGGCAGGAGTGGAGGGTGGAGTTCAAGTTGTGTTAACAGTGAGAAGTGGTCTGAAGGGATGTGAGGGTGTGGACACCCAGTGATGTTGTTCTCAACCAGCCATTGAGGATCTAAAGGCCCCAGGACACCAAGCACGTTCATATGAGTCTTGGAATAGAAAATGTAGTCAATCACGCCCTGGAAAGAGATTGGGAATAGGAAAAAAAGAA chr4 - 94230402 58100466 58100465 58104262 36126141 36126140 36129937 3797 AAGGGGTTGAGACCGACAAGAACCTTTCTGAAGGGTTCTGCAGACTA------AAGAGAGTGGCTTC------AAACACACATAGAAAGCTTATGGATAAAATGAAGTATTTTC---TGAATATAGGTGGGAGAAACAGATGGGAAA-AGCTTTTAAAAAGGACAATGGGAAG-----AAGAGCTGCTCTCGGAGCCCACTGTGCCAAACCTGACTTCAGCGTATGGTACGCAAA----TGTTCACGCCCCTTACATCAAAATAAGGAAACCAAAATATTCGGCTAC---AATGTACAAAATTCTCTTTtatatatatatatatgtatatatataCACACAAAACCCCATA--TCT--AACAGATTTACCATAT-TGAATTTTAAAAAGTTGCTTGTAGAATGGTGCTGGATTTTTTTTCTCTGCTTGCTTT-AGGCAGTGCTGCTGCTTAGAAGTTGACACCAGGCACGATATCATTGAAACCCAACCAAGAAAGCAAGGAGCAGGAAGGGGCTGAGGGCTTTTTCCTAAGCACGGGTGGTGCGGGCACTGCGATGTGCCC------AGTGCCTAAGCATGGGAAACAAGGGTCGGCGATGGAGAGAACCACTGGTTTCCCATGAATGCAT-TTACGGTTAGGGACATTTACTCTCTATCACTTCC-CTCCCTCTCCCCTAGAACATACCCTGCGAGGCACTGTCAGCCTCCATCTGG--------------------------------GTCAAAAGAAAATGAGTGTCACCATCTGGG------------------------------------TGCTGCAG----ATGGCCGTGAAACAGATCTCATCCCG--------------------CACACGTGGCTGGCGGCTGATGG--------------------CTCCGCGCTCCTTCTTG---TCTCAGGGC-AGAGCTCTAC------------------------------GAACAGCAGCAGTTCTGCTCGGCTGGAA--------AAAAGCACAACCCCTTACTGCTCCTTTTGTAGGA-----AAGGGGGAGAAACCATAGGAAA-------AGAGGG-----AGGGAGCCAGACATGTGCGAGGCGGGTAAACATGCCCCCGGTTATGTGCATCGACCGAAACAAAAACAGAGTTCTAAAGAGATTTTTTAAAATCCAGAGGTTTTGTGCAACATCTGCTTAAACAGCGTTTTAAAAATCACACGGCATAATGGACGTTCTGAA---GTGCATTTGGAAGCAGAGAAAATCCAATTAAACACCTTCCTGCAACGGAACACTTCAGTCAGTTACAAACCCAATGAAAGTACAACGTAGCTGTTTACAATGTTTACCAGGTGCTTTTGTTTCAACTCCCACCCCCCACCCCGATATTACAAAAGATTGTTGCCGtttttaatttttattaataaaCGGGCTCCTCTGCAGTTCATATACAATCGTAGGTGAACTTTAAATTCCATTTTATACAAACATCTCAAAAAATATTGGGAGTGAAGTATGGT-GGAACTATTGCTCACGTTGCTAGTTAACATGCGTGTAGGACAGGAGGAGAATGGTT-GTTAGTGCACA--CCTCCAGAGCAGAGAACCCCTCCAGAAGAGA-----------------TACAGTAGCTGATTACAGAAA--GGTAATGTCCACAAAATTAAGTTTTTCATGCTATTCTACTTTCCAGTACTATGCTCAATTGCTGTCTCAATTTATCCGCATGGCTAGGCGTTGAACGCT-GAGGTATATTAAAAAGGAGATACCTGCACCTAGAGGAAAATTCTTCTTTAGAAAGGG-----CTTTTT------------TGGTGCCGCA-------CAAAGCA------ATTTACATCTGTCAATTTCACCCAGCTACGGCAATTTCCAATTTGTATCAGACAACAGATGACGTCTCCAGTTTTAGGCACTTCTTTTAAAGGGAGCTGTCATTTCACTGAACTCATCTT-TGCATTCT------------------GTCCCACTCCTCTCCCGTCCCCCTCAGCAGAAGTCA--------GGGAATACTTCTACTCTGGGTCCAATCGATTTTTCCTATGGATAATTTCCTACGTACAAAACAAC-AAAGGAAATGGAGTATCAAAGAGTAGAGGAACAGCCTGACTTGTCGGTTCTGAGAGACAGAAGATGGCCCCTTAGCATTTAAA-CTAATTATTTAACGATTCAAATTTGAATTAAG-----TATACGAATGAGACATAAATATAGGCTATCAATCTGTTTAAAAATTGCATTCAGATAATGGAAAATTTTTTCATTTATTAAAAATATCACATTTTGAGACTAGAAACAGTAAAGTGCATGAAAAGTTTAAAATATAAATTCAAGAAAA-TCTTATAGCAGCAAAAAAGCAGAATAAAGAAAAACTTAAAAACACAGACACAACCTTTTCCTATTACTGTGCCATTTTTCTTTTAACATTAAGCAGCCAACCAATTTTCTTCCAGAAAACTACGTTAGGTTTAATGCCCCTTGAGGCACAAGGTTTTGAACTGGCCACCAAGAGCATAAAAGGAAAAAGAGGATTTCCAACACATCTCAAGAGCATTAACAGCTGGGAATGAACCAGAAGCTTTTTAATTCAACCCTGACCAACAACAGAAATGAAAGATTACTCAAAACATCTGATGGCTATTTGGCAACTAGGGTCAGGAAAAATAATGCAGGGAATGATAACGGCTACCAC-----------TCTCTTCCCC----CCGTGG--------------------AAAGGCTGCTTCACACGTGCCGTGGAGACAGAA-------GTGTGATCATTTCCAGC---AGCTTTTTCCTGTACCCTACGCTTAATCAGTTCACCCAATGCCTCTCATTTTTGCAAATGACCTT--TGGAAAAGGAAACCTGGAGCAGATCTGGAACTTCTCCATTCT-------------CAAAGGCTTGCAATGGCTTGCTTTAAGTGCAAATCCTTTCCAAATCCTGCTCCCAAACTATTCTGCTGACCAGCATGTTGTCCTAGCTTGCCAAAGCAGACACAGCTCTGTCTCACAGAGACTGTCTGGATTCCTGAACACCTTACCCTGAAAGAATCAGGCTCTTCAGAGCTCCAAAACAAGGTTACTGTCACGTCTGCCAAGCAAGCACTCTGTAATGGCATGAAATGCTCACGTATGGATTCTCGTGAGACATAGGTTCA--TTGGTATTTTTGTTGTAAACGAAATTGCATCAAAAGAATTTAGACCTCAAGTTTTTTCACGGATAC---GAAGCCATCTTTGGTTTTCTAGTATTAGATAATGGGCCGGGCCACGGTGCTAC----TAATTTACAGTC-----AGGTA---TTAAGTGCTTTGCTAATGTGCAAAATTTATTTTGGA-TGCAGAGCTCAGTCTCCACTTTGGGTTCAAACAGAATTCCTAACGTTCTTCCTACCAAGCA----ATCACTTC--------TATTCTTGTTTTTCTTTCTAAAAGGTTTTTCTCCTAAAA-GGTTGGCTCATTTTACCACGTTCTGGAAAAAAAGCATTACCTTTAAATAAGCTGATATGTAAGTTTTTAATCTCA---------TTTGTCCATTTCTAAGTGCAGCTTCCTACCGAAAAGAAAAAGCTTGCCAGttaaaaaaaaaaaaaaattaaattaaaaaCCTGGAAAGGGAATAATACTTTGGTTCCAGCCCTAGTGCCAAATGATACCAGTAAGCACCAAAATGTGCAATATCTCATATCAAACACATAAGGAAAGGAGCTTGAAGAAGCAGCTTAAGGTTGGCCATACTTCACTCCTATATACTTTGATTTACAACTGTACAGGTCCATAACAACAGGTCCTTGCCCGCAAAGGGGCAGGGCTCCACTACCTCCTGTTAGGCAAGTGCACACCGTTGACAAGAGGCAGGAGCGGAGGATGGAGTTCGAGTTGTGTTAACAGTGAGAAGTGGTCTGAAGGGATGTGAGGGTGTGGACACCCAGTGATGTTGTTCTCAACCAGCCACTGAGGGTCCAAAGGCCCCAGGACACCAAGCACGTTCATGTGAGTGTTGGAATAGAAAATGTAGTCAATCACACCCTAGGGAGAAA-GAGAAACATGAAAGTGAGAA ..::::.x.:.:.x:.:.....x.xx::.xx.x:x..:...x:....------..x.x.........------.x.:x....:..:.x...x..x::......x..:..::.x.---.......x:.x::::x..x:x..x::....-.....xx..x....xx.......:.-----..:.....x....:..:....:.......x...........:.:.:..:..:x....----.......:.x............:x..x.....x.........:....:---.x.:.........:.:...---------------------------...:.....x:....--...--...........:....-......:...........:.:..............:x..:.x...............-...........:......:.................:....:-..:....xx..:...-x:............x.:.x..x.xx.:..:...:..x:.xxx.:..:x-..x..:::....:..:.x...------.:..:x...:xx.:x..::::::x:::.::.x:x......::x:x..::..xx....x.:x::.-.x..x..x.--------..x.xx.x.x..x.x.x-:.::....:..::.:.xx....:x.x:x..xx.x.x.:.:xxx.xx..:..--------------------------------..:xx..:....::x..:....xx...:::------------------------------------...x....----.....-:.:..:.xx.x.....:.:.--------------------..:.::.:x:.x:.xx:::x..:--------------------:..xx.x..:.:.:...---.....xx..-.:..:..:.x------------------------------.:.x.......x.....x..:x...:.x--------x...:..x.------...::........::.:::-----..:...x::.::x:..:x....-------..x...-----:..:.:..:x:..::..x:.xx:....x.x........x:..---...:.:.:x..:.....x..-..x.:..------.xx.x:..:..----.....x.x:.::-......:.:..x....x:.:..---....x:....:.x......:.:.x.:....---.:.......-.........:..:.......x...............:..:::.:..::...xx:.....----..:..xx..------.................x...xx.x:....:...----.::.x.:.:x..:::x:x.....x.....x..----------------............:...........::..............:..:............................................................-....x..........:......:...........:..x..x.......:....x..-.........:.--.............:.....x:...:..x.:.-----------------.................:...--.......................................................:x.xx-------:...:x..::..........::....:.::..-.........x.:..:...:.--......:x.x.........::x..x.:xx..:..x-----......------------....:.:x:.-------:...:x.------.........---x..x.....:x.:....::::.:x.:.x.x..:..x:...::...:.::...:...:.x:x:.........--..x........:.xxx::..:..x....:.x...x-....x..:------------------:......:x.:...--.....x..-----:..:.:.--------..:....:.x.:x:x:xx:.:.::..::....--x.......x:.xx.:x---.:.:....::..-....x.....x.x:..:x....x..:x::.......x:.xx....:.x.:...:...--.:...:::x::x.xx::.......-.......---..::...:........x:..x:-----....:x.:.......:.............---.x.x...x......x......x..............:..-:...................................................................:x......-..............................................................:............xx..-----.....:...:..............:::.........x:::..xx...:.x....:......x....-.:....x........x.--------.xxx...x....:.:::x........:.:..x...-....:....::.......:......x.....:................x:.....x....:-........---...:...x.......:........:....:..........-.:.:x..----.:.x.xx.::....::.-----------.....::...----..x.x.--------------------..x:..::.x.x.:x::..::.x::.x...x..-------..:....:x.::...x.---.:....xx:.x:x:..:.---:...x....:xx..:---.x::...:x....x:..xx....:x.--...x...::x:..x.:.:x..x..----...x...x:x...:-------------..:.:.x...x.x...xx.-----...x:x....:.x....:x:x---..x:..x..x:..x.::.-------------:.:...x:..--...:.:.----------...--------.:.x:.x::....x..x.x:x::.:x.:x.:..x:..-------...x....-------...:.x...xx:.:.xxx..x....xx.:.:xx.x.:...x..xxx:...x:.:x.x..---.....::xx:.:.x.:---.:..--:::.:....x----.:x...-......--...x:x.:xx...x.:-x.x:.x..x.xx.x.x....---.x.:........::....::.:xx..xxx..-----..:x.:xxx.:x....:----..:....::.x.-----.:...---......:..:..:...........--.x.:......-.x..:.:x.....------------.x:...x::..xx:::..x...:.:...:xx.:...----....:.:x--------..:.x.xx..x.xx...:.....:x.x::.:.:x.....-..........:.xx.x.-.:...--:...:....:...xx:...::.x..:.x:...:::x:x.x..x:::....---------...:..x....:x..xxx::...x::x.:xx..x.x...:.:xx.x.x.x.......x.x:------...........x::..x....:..:......................x...............:..x....x.......:...x:...:.:.x...........x.....:.:.:..................x...................:...............................:......:...::.:.:-:::x.......x:.............x:...........x.....:.................:.....:........:.............................................................................:.....:..:.............................:.....x..........................:....:.::...:.-x:.:..:.x....:x:.... 47M6D14M6D41M3D30M1D25M5D57M4D48M3D19M27I15M2D3M2D16M1D57M1D42M1I15M1I48M1I21M6D64M1D9M8I17M1D51M32D30M36D8M4D5M1I20M20D23M20D17M3D9M1D10M30D28M8D9M6I19M5D22M7D6M5D42M3I20M1I7M6I11M4I12M1I22M3I30M3D9M1I59M4I9M6I34M4I32M16I104M1D56M1D11M2D31M17D21M2D60M7I32M1D20M2I35M5D6M12D10M7D7M6D9M3I71M2I35M1D8M18D14M2I8M5I7M8D32M2I16M3I12M1D57M2I24M1D7M3I22M5D29M3I39M1I76M1D79M5I66M1I17M8I35M1I61M1I8M3I40M1I7M4I17M11D10M4D6M20D33M7D17M3D18M3I15M3I26M2D24M4I14M13D19M5I21M3I18M13I10M2I7M10I3M8I37M7I8M7I59M3I16M3I4M2D10M4I6M1I6M2I16M1I20M3D31M5I17M4D12M5D5M3D24M2I10M1D13M12I36M4D8M8D39M1D17M1I5M2I50M9D61M6I202M1I242M1D20M 2557/3536 72.3% 3797/94230402 0.0% 667/3536 18.9% 19616268 NA +16141 chr4 + 190214555 77726151 77726150 77726405 255 AAAGGCTGCCACTCACTTTGAAATCAAAGGTGTAATTGGTGTAAGGCATCAAGTTATTTTCATAGGCGCTCTTAAGTTGGAAGCCATGTGTGATTCTCCCTTCTGAGCTTCCATTCTTTCCATTGCAGCTGAAGTTCATAAGACACTCATTGTACCTTAGTTCCTTGAAGTCTTTATGGTTGTCAGCTACTCCTCCATTGCTTAAGTATTCCACAACACCTGGTAGAATAAAGAAG-----AGACACTTCCATTTAGCAT chr4 - 94230402 58104576 58104575 58104834 36125569 36125568 36125827 259 AAAAATCACTGCTTACTTTGAAATCAAAAGTGTAATTGGTGTAAGGCATCAAGTTGTTTTCATAGGCGCTCTTGAGTTGGAAGCCATGCGTAATTCTTCCTTCAGAAGCCCCGTTCTTTCCACTGCCGCTGAAGTTCATGAGACACTCGTTGTAACGCAACTCCTTGAAGTCCTTGTGGTTGTCAGCTACTATGCCGTTGCTTAAGTATTCCACTACACCTGTTTGCAAAGGAAAGGATTCAGGCACTTGC-TTTAACAT ...:::::.::..:..............:..........................:.................:..............:..:.....:.....x..:x::..:.........:...x............:........:.....x.x:.::...........:..:...............x:x..:.................x.......x.x.x.x.:::...-----..:.....x.-....:... 236M5I10M1D8M 208/254 81.9% 259/94230402 0.0% 6/254 2.4% 19621575 NA +15987 chr4 + 190214555 77728811 77728810 77729086 276 AAAAGTGAAATTGAAAGCAGTGAGGAAATGATATTATAAATACCTGAATCTGGCAATGAGTTAAGATCTGCACATAGCACCAGCGGGATGGAATTAGGATCTGCAGTTGGGCTTCCAGGCCTACTAGAGGCTTTCTCCAGAATGTTTTTAACCTCTGAGACAAACATCATGGTCTGGATGAGCTTCACATCAGAATACTCTGGGTCCCAATGCATGTGGGCATTTGCCACTATAAGCAGCTGTTTGTCTGCAGCATGAATAGGCTTCATACCTAAA chr4 - 94230402 58105469 58105468 58105739 36124664 36124663 36124934 271 AAAGGTTAAGTTAAAAATTAAGATGCAGTAAT--CAGCCTTACCTGAATCAGGCAGTGAGTTAAGATCCGCACAAAGCACCAGGGGAATAGAATTAGGATCTGCTGTTGGGCTACCAGGCCTGCTTGAGGCTTTCTCAAGGATATTTTTCAGTTCTGAGACAAACATCATAGTCTGAATGAGTTTCACATCTGAGTATTCGGGGTCCCAGTGCATGTGGGCATTGGCCACAATGAGCAGCTGTTTGTCC---ACATGAAGAGATTTAATACCTAGA ...:..x..:..:...::x:x..x.x.:.:..--:.xxxx..........x....:............:.....x........x..:..:..............x........x........:..x...........x..:..:.....x.x:.................:.....:.....:........x..:..:..x........:..............x.....x..:..............:---:......x..::..x.......:. 32M2D215M3D24M 218/271 80.4% 271/94230402 0.0% 5/271 1.8% 19623342 NA +11568 chr4 + 190214555 77731381 77731380 77731542 162 ACTCACCTGCTCCAAATAGTTCTTTGTGGACCTCTAATACCACAGCGACACCAATGTTATCTTTTGTCATCACTCTGTTCAGCATAGCTTCGGATCCATCTGAATTAGCCATCGCCACTTGGTTAAATTCCACTGTATGCTTCTGCACCAATGTAAATCTAA chr4 - 94230402 58106970 58106969 58107131 36123272 36123271 36123433 162 ACTTACTTGCTCCAAATAATTCTTTGTGCACTTCTAACACCACAGCAACTCCAATGTTGTCTTTCGTCATCACTCTATTTAACATAGCTTCTGAACCTTCAGAGTTAGCCATTGCCACCTGGTTGAACTCCACTGTATGCTTCTGCACCAGTGAAAATCTGA ...:..:...........:.........x..:.....:........:..x........:.....:...........:..:.:.........x..x..x..x..:........:.....:.....:..:......................:..x......:. 162M 137/162 84.6% 162/94230402 0.0% 0/162 0.0% 19624411 NA +13985 chr4 + 190214555 77742136 77742135 77742313 178 CTTACTTTTCTGTTTTGAAGAATATTGCACAACCATCTACATGCTTTCTCTCCTGCTCAGACATGATTTTGGCACGTGACTTTGGAGAAAAAAATCCATCATATCCACGCTCCTTCAATGCTGGCAGAAAGAGAGTGAAGTATTGCTCTGTTTCCACTTCCTGAGATGAAAGAAAAGT chr4 - 94230402 58108534 58108533 58108711 36121692 36121691 36121869 178 CTTACTTTTCAGTTTTGAAGAATATTGCACAGCCATCTACATGTTTTTTCTCCTGCTCAGACATGATTTTGGCACGTGACTTTGGAGAAAAGAATCCATCGTATCCTCGTTCTTTCAAGGCTGGCAGAAAAAGAGTGAAGTATTGCTCCGTTTCCACTTCCTAAAATTGAACAGAAAT ..........x....................:...........:...:...........................................:........:.....x..:..:.....x...........:.................:.............:.:..x:..x.:..:. 178M 159/178 89.3% 178/94230402 0.0% 0/178 0.0% 19633602 NA +13036 chr4 + 190214555 77744713 77744712 77744895 183 GTTACCTGAAGACTAATGATATCTGCGTCACAGTTAACAATTTCTTCCATAATTCCCTTTTTCCTGTATTCCCAGTTTAATGCCCAGGATGGGCAATAGCCATATAGCTGCCGGGTAGCGTATTTATCACATAACACATTGTAACACATAACCGTGAATGATGCTAAGAAGTGGGAGAAAAAA chr4 - 94230402 58109402 58109401 58109584 36120819 36120818 36121001 183 GTTACCTGTAGACTAATGATATCTGCATCGCAGCTGACAATTTCTTCCATGATTCCCTTTTTTCTGTACTCCCAATTCAGCGCCCAAGAAGGGCAGTAGCCATAGAGCTGCCTGGTGGCATATTTATCACACAACACATTGTAACACATAACCGTGAATGAAGCTAGAAAGAAACAAAGAAAA ........x.................:..:...:.:..............:...........:.....:.....:..:.::.....:..x.....:........x.......x...:..:...........:.............................x....::...x::x.:.:.... 183M 154/183 84.2% 183/94230402 0.0% 0/183 0.0% 19635311 NA +6779 chr4 + 190214555 77748286 77748285 77748394 109 AAAAAAGGAAGAATAAGAAAAACTATTTACCTGACGGCAGAATTTGGTCTCGTTCTTTTAATGTAATCCATGGCCTCGGAGGAAGCTGCTCTGGATGAACTGAAAAAAA chr4 - 94230402 58111175 58111174 58111281 36119122 36119121 36119228 107 AACACAGGGAAAAGAACCACAGCT--TTACCTGAGGGCAGAATTTGGTCTCGTTCTTTCAAAGTAATCCATGGCCTTGGAGGCAGCTGCTCTGGATGAACTAAAAATAA ..x.x...:.:..x..xx.x.:..--........x.......................:..x..............:.....x..................:....x.. 24M2D83M 91/107 85.0% 107/94230402 0.0% 2/107 1.9% 19637111 NA +7608 chr4 + 190214555 77756857 77756856 77756953 97 GTTACCTGCGAGATTGTCAAGCATGAAGTTCAGTAGCTTTCGGGTTCCATCTGGGTCCTGGTATAAGTTGAGAATATCCTGTGATAAAGGATTGCCT chr4 - 94230402 58112114 58112113 58112210 36118193 36118192 36118289 97 GTCACCTGCTAGATTGTCAAGCATGTAGTTCAGTAGCTTTCGTGTTCCATCTGGATCTTGGTAGAGGCTGAGAATATCTTGTGATAAAGGATTGCCT ..:......x...............x................x...........:..:.....x.:.:..........:.................. 97M 87/97 89.7% 97/94230402 0.0% 0/97 0.0% 19644743 NA +3136 chr4 + 190214555 77768438 77768437 77768512 75 CTGGGTAACAGAGTGAGACTCTGTCTAAAATAAATAAATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 2570379 2570378 2570451 91659952 91659951 91660024 73 CTAGGGACAAAAACGAGACT--GTCTAAGGTAAGAAAATAAACATTTGAATATACATATATAAATATAAATATAT ..:..x.xx.:.::......--......::...:x.....x.:..x.:x.....:.......x.....x...... 20M2D53M 54/73 74.0% 73/94230402 0.0% 2/73 2.7% 75198059 NA +9135 chr4 + 190214555 77773060 77773059 77773186 127 AACTGTTTAAAAATCACTTACCTTTCAAACCTAGAGTTTGTAGCTGGAAGAGCCGACCAAGTTCATAAGGCAAAACCCGTAACAGATTGTTATTTAAAAGCAATTCCCTGTTTTAAAAAAAAAAAAA chr4 - 94230402 58112626 58112625 58112752 36117651 36117650 36117777 127 AAGTGTAAAGAATTCACTCACCTTTCAAACCTAGGGTTTGTAGCTGGAAGAGCCGTCCAAGTTCATAAGGCAAAACCCGTAATAGATTGTTATTTAAAAGCAATTCCCTGCAACAATGCAAAAAAAA ..x...xx.:..x.....:...............:....................x..........................:...........................:xx:..x:x........ 127M 111/127 87.4% 127/94230402 0.0% 0/127 0.0% 19660434 NA +17108 chr4 + 190214555 77774521 77774520 77774729 209 TTTCCTCACCTGAGAGACACCATGTTTCCTAGTTCTGCTGGTAAACTTCTGAGTTTATTGGATGACAGATCCAGGTAAACCAGATTATGAAGCTTGGCAATATCAGGTGGAATGCGACTAAGGTAATTGTCATTTAGGTGCAGCGCTGTCAAGTGTGTCAATGACCAAAGTGATGTACTTAGGCTCCGCACTCTACCTAAAAGGCAAAA chr4 - 94230402 58112993 58112992 58113201 36117202 36117201 36117410 209 TTCTCTTACCTGAGAGACACCATGTTTCCTAGTTCTGCTGGTAAACTTCTGAGTTTGTTGGATGACAGATCCAGGTAAACCAGATTATGAAGCTTGGCAATATCAGGTGGAATGCGAGTAAGATTATTGTCATTGAGGTGTAGAGCAGTCAAGTGCGTCAGTGACCAAAGCGACGTACTTAAGCTCCGCACTCTACCTAAAAAACAAAA ..::..:.................................................:............................................................x....:.x.........x.....:..x..x........:....:.........:..:.......:....................::..... 209M 191/209 91.4% 209/94230402 0.0% 0/209 0.0% 19661528 NA +10733 chr4 + 190214555 77776265 77776264 77776395 131 ACTCACCCGAGATTTCTAATTCTGCCCAGTGAGATTTTTTCCCATTGGCTACCTCCTCTGCTGACATGATGGTATAAATTCTGCGAGGATCTGGAGGATCATATTTTTCCTTTGGCATCCCTATTAGTCTG chr4 - 94230402 58113602 58113601 58113732 36116671 36116670 36116801 131 ACTCACCCGAGATCTCTAATTCAGCCCAGTGAGACTTCTTCCCGTTGGCTACCTCTTCTGCTGACATGATGGTGTAAATTCGGCGAGGATCGGGAGGATCATATTTTTCCTTTGGCATCACTGTTAGTCTG .............:........x...........:..:.....:...........:.................:.......x.........x...........................x..:........ 131M 120/131 91.6% 131/94230402 0.0% 0/131 0.0% 19662663 NA +3076 chr4 + 190214555 77779045 77779044 77779123 79 TCAAAAAAAAAAAAAAAACAAAAAAAAAACACAAAAAACACACAGGCATAGGATTAGAAGGCAATTTAATCTGTTTTAA chr4 - 94230402 39398359 39398358 39398430 54831973 54831972 54832044 72 TTAAAAAAAAAAAAAAAGCAACAAACAAACACTAAAACCAAACAAGCCTA----TAAAATGCTATGGAA---GTTTTAA .:...............:...x...x......x....x..x...:..x..----..:..x..x..xx..---....... 50M4D15M3D7M 58/72 80.6% 72/94230402 0.0% 7/72 9.7% 38380686 NA +3259 chr4 + 190214555 77784555 77784554 77784632 78 TGTGGTGCAGCCTCAACCTCCTGGGTTCAAGTGATCCTCTCACCTCAGTCGTCTGAGTACCGAGGACTACAGGTGCAC chr4 - 94230402 18197122 18197121 18197199 76033204 76033203 76033281 78 TGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...xx.:.....:x..x..:.............x.:.x.xx:x.....:.x.:::....x.x:.:......x...... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 59587433 NA +3029 chr4 + 190214555 77789948 77789947 77789998 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCATTCCCATCTGCTTA chr4 - 94230402 34847731 34847730 34847781 59382622 59382621 59382672 51 AAAGGAAAAAAAAAAAAGAAAAAAGAACAGAAATTTAATTCTGTTTGCTTA ...::............:......:..x.:.....:.x.:.::.:...... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 42942217 NA +3799 chr4 + 190214555 77809037 77809036 77809181 145 TCCTAAATACTTTACAGGACTACATCATTTAATCCTCACAA-AACTCTACGAGATAAGGAAT----ATTATCTCCCTATTACAGATGAGAAAACTGAAGCATAGAGAAGTTAAATGAGTTTCCGTAGAGCTGGAAAGTGGAGGACCCAAG chr4 - 94230402 10729140 10729139 10729279 83501124 83501123 83501263 140 TCCTGAATAA---ACAGGA----ATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGG---GTACAGAATCCAGG ....:....x---......----..::x..x.x........-.x.:..::...:..:.x...----..:.x....x.x......:..:.........:...:.x.x.:.....:.:.x..x..xx:::x....---..:x..:.:...:. 10M3D6M4D18M1I20M4I67M3D14M 95/135 70.4% 140/94230402 0.0% 15/135 11.1% 67079897 NA +3014 chr4 + 190214555 77836244 77836243 77836292 49 TTGTTTTGTTTTTTTGTGTTGTTTTGTTTTGTTTTGTTTTTAGTAGAGG chr4 - 94230402 8257430 8257429 8257478 85972925 85972924 85972973 49 TTATTTCTTTCCTCTGTGTTTTTTTGTTCTGTTTTGTTTTTAGCAAAAG ..:...:x..::.:......x.......:..............:.:.:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 69578814 NA +3329 chr4 + 190214555 77869665 77869664 77869742 78 CTGCAACCTCTGCCATCCAGGTTCAAGCGATTCTTGTGCCTCAGCCTCTCAGGTAGCTGGGATTACAGGCATGCACCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:..:..:xx:x.x..::........:.x...x::x.x........:...:........:.:....--.:....... 67M2D9M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 59672539 NA +3214 chr4 + 190214555 77889847 77889846 77889915 69 AATACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACATATACACCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC .......x.xx.:...:x.:..::x.x....:.......x.....x:...:...:....:.x.:..... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 61506276 NA +4907 chr4 + 190214555 77894122 77894121 77894236 115 TTTTTTTTAATTTTCAGATTTGGGATGATGAAATTGTTGCAGACTTTTACGTAGCTGTTCCAGAAATAATGCCTGAACTTAATCGATTAAGGAAGAAACTGAATAAAAAATATCC chr4 - 94230402 58139234 58139233 58139346 36091057 36091056 36091169 113 TTTGTTTTA--TTGTAGATTTTGGAAGATGAAATTCAAATGGATTTCTACATAGCTGTTCCTGCAATAATACCTAAGCTGATCCCATTGAGGAACAAGCTAAAACGAAAATACCC ...x.....--..x:......x...x.........xxx:::..:..:...:..........x.x......:...:.:..x.x:.x...:.....x..:..:..xx:......:.. 9M2D104M 82/113 72.6% 113/94230402 0.0% 2/113 1.8% 19754888 NA +3046 chr4 + 190214555 77905501 77905500 77905548 48 AAAAAAAAAAAAAAAAAAAAGAATATATGTAATTGGTCATTAAACAGA chr4 - 94230402 54566986 54566985 54567033 39663370 39663369 39663417 48 AAATAGAAAAAGAAGAAAAAGAATATATCTAACTGATCAGTAGACAGA ...x.:.....:..:.............x...:..:...x..:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 23338515 NA +5161 chr4 + 190214555 77949759 77949758 77949888 130 TTCTCATCATTAATGTTATGTATATTATTTTCTTTCAGTTGGATATGTCAAGTGACCAGATAGCTGCCAATCTGCAAGCAGTTATTAATGAAGTTTGTAGGCACAGACCGCTGAATTTGGGTAAGTGGTT chr4 - 94230402 58148549 58148548 58148674 36081729 36081728 36081854 126 TTATCATGGCTAAT----TCTGCATTATTGTTTTTCAGCTGGATATGCCTACTGAACAGATAGTTGCCAATCTAAAAACAATTATTGAGGATATCTGCAAGTTCAAACCATCAAGTGCTGGTAAGCAGCT ..x....x::....----.x.::......x.:......:........:.x.x...x.......:.........:x..:..:.....:.x..x:.:..:.:.:x..:...::::.:.x:x......::.:. 14M4D112M 86/126 68.3% 126/94230402 0.0% 4/126 3.2% 19801210 NA +13975 chr4 + 190214555 77963939 77963938 77964407 469 CATGGGTAAAGTAGATCCTAAGAAACCAAGAGGCAAAATGTCATCATATGTGTTCTTTGTGCCATCTTGTCAGGAGGAGCACAAGAAGGAGCACCCAGATGCCTCAGTCAGCTCCTCAGAGTTTTCTGAGAAGTGCT--GAGAGGT-----------------GAAAGACTACTTCTGC--------------------------------------------------------------------------------TAAAGCAAAAGGAAAATTGGAAGACATGACAAAGGTAGGTAAAGCCCATTATGAAAGAGAAATGAAAACTTATATCCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATACACTCAAGAGGCC-------------------------------------------TTCTTCAGCCT-----------------------------------TTTTTCTTGTTCTGTTCTGAGTATCACCCAAAAATCAAA---GAACATCCTGGCCTAAACATTGGTGATGTTGCAAAGATGCTGGGAGAGATGTGGAATGGCACTGCTGCAGATGACTAGCAGCCTTATACAAAGAACGCTGCGAAGCTCAAGGAAAAATGTGAAAAAG chr4 - 94230402 49489199 49489198 49489847 44740556 44740555 44741204 649 CATGGGCAAGGGCGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCGTACTTCGTGCAGACGTGCCGCGAGGAGCACAAGAAGAAGCACCCGGACTCGTCAGTCAACTTCGCCGAGTTCTCGCGGAAGTGCTCGGAGCGGTGGAAGGTGAGGCCGGTGGAAAGGCGGCTGCTGCGCGGCCGTGGGGGCGGCGGGGCTCCGTCTGATCCCGCCCCCCGCGCCTCTCCATTGCGTGTGTCTGCAGACGATGTCCAGCAAGGAGAAAGGGAAGTTCGAGGAGATGGCCAAGGGAGACAAAGCTCGCTACGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGAGAGAAGAAGGGAAAGAAGAAGGACCCCAACGCTCCTAAAAGACCACCGTGAGTGTTTATGGGATTAAACAAACCCCACAGCGTACGTTCCGCTAGCCTCTCGCTTAAACGTCATTTCTTGTTTCAGATCTGCATTCTTCCTTTTCTGTTCCGAACACCGTCCAAAAATAAAAAATGATCATCCCGGCTTGTCTATCGGAGACACGGCAAAGAAGTTGGGTGAAATGTGGTCTGAACAGTCGGCCAAAGACAAGCAACCCTATGAACAGAAGGCTGCAAAGCTAAAGGAGAAATATGAAAAGG ......:..:.xx..:..:..x..:..:x.:.....:.....x..:..:.:..x...:....x:x.x..:.:x...............:.......:..:x.x.......:..:.x.x.....:..xx:........--...x...-----------------.....:.x:..x....--------------------------------------------------------------------------------:..:.x:.....:..:..x..:..x...:.x....x..::.....:.::..:..x..:..:.....:.x:...:.:.....:.....:....x:..::::...xxx.....:.....::.x.::..:..:..-------------------------------------------.:.x::.....-----------------------------------..:...:.x........:..::.:.::........x...---..x.....:...:.:xx:..:..x..:::x.......x.:....x..:......xx..:xxxxx.x..x:.x...x....:..:...:x.x....x.....:.....x.....:....:......:. 137M2I7M17I16M80I132M43I11M35I39M3I127M 326/469 69.5% 649/94230402 0.0% 180/469 38.4% 28474740 NA +6673 chr4 + 190214555 77964242 77964241 77964407 166 TTTTTCTTGTTCTGTTCTGAGTATCACCCAAAAATCAAA---GAACATCCTGGCCTAAACATTGGTGATGTTGCAAAGATGCTGGGAGAGATGTGGAATGGCACTGCTGCAGATGACTAGCAGCCTTATACAAAGAACGCTGCGAAGCTCAAGGAAAAATGTGAAAAAG chr4 - 94230402 76441081 76441080 76441249 17789154 17789153 17789322 169 TTCTTCCTATTCTGCTCAGAGTTCCGCCCCAAGATCAAGTCCACAAACCCTGGCATATCCATTGGGGACGTAGCAAAGAAGCTTGGTGAAATGTGGAACAACCTCAGTGATGGTGAAAAGCAGCCCTATAACAATAAGGCTGCTAAGCTGAAGGAGAAGTACGAGAAGG ..:...:.:.....:..x....x:.:...x..:.....:---:x.x.:......x..xx......x..:..x.......x...x..x..:........:::.x:::x..xx.:...xx.......:....xx..x..x.....x.....x.....:..:.::..:..:. 39M3I127M 115/166 69.3% 169/94230402 0.0% 3/166 1.8% 1523161 NA +3361 chr4 + 190214555 77993152 77993151 77993231 80 TGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCGTCAGCCTCCTGAGTAGCTGGAACTACAAGTGCCCGCCACTG chr4 - 94230402 18197127 18197126 18197204 76033199 76033198 76033276 78 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTG .:..:..:xx.x..:.::........:.x...x.xx.xx.......::::................x...--.:...... 70M2D8M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 59796025 NA +3022 chr4 + 190214555 78026952 78026951 78026991 40 TTCTTGTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTT chr4 - 94230402 20788980 20788979 20789019 73441384 73441383 73441423 40 TTCCTGTTTTTTTTTTTGTTTGTTTGTTTTGCTTTTTTTT ...:.....................x....x:........ 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 57237972 NA +3548 chr4 + 190214555 78043507 78043506 78043590 84 TTTCTTTCCTGTGTAAATTAATCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGG chr4 - 94230402 18982279 18982278 18982355 75248048 75248047 75248124 77 tttctttctttttt-------tttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ........:.x.x.-------.:...x.x.x.x.x.x.x.x.x..................x.................::... 14M7D63M 61/77 79.2% 77/94230402 0.0% 7/77 9.1% 59061228 NA +3249 chr4 + 190214555 78043528 78043527 78043587 60 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982295 18982294 18982354 75248049 75248048 75248108 60 tctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x.x.x.x.x.x..................x.x...............::.. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 59061233 NA +3102 chr4 + 190214555 78043550 78043549 78043585 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -3585514 -90644888 +3316 chr4 + 190214555 78043552 78043551 78043587 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% -3585512 -90644890 +3445 chr4 + 190214555 78043552 78043551 78043591 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGGG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................:::. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 59061237 NA +3102 chr4 + 190214555 78043554 78043553 78043589 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% -3585510 -90644892 +3735 chr4 + 190214555 78043554 78043553 78043619 66 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGGGAGAA---------AGAT-------TGCCTGGAAGTATGAGGTTT chr4 - 94230402 18982315 18982314 18982396 75248007 75248006 75248088 82 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTGATAATTTTGTGCCTGAGAGTTTGAGGCTT ................x....................:..:.---------x...-------......::...x.....:.. 42M9I4M7I20M 58/66 87.9% 82/94230402 0.0% 16/66 24.2% 59061239 NA +3673 chr4 + 190214555 78043707 78043706 78043884 178 TTCTCTTTCTTTCTCTTTCTTTC----------------TTTCTTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCC-----TTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCTCTCTCTCTCCCTCACTCCCTCCCTTCC chr4 - 94230402 76984173 76984172 76984362 17246041 17246040 17246230 190 TCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCCTTCCCTCC---------AGCTTCCGCCCTGGCTCGTGTTTTATCTCCTAACATCTCTCACTTTCTTTCTCTTCTGCTGTTACTTCATTCTCAATTCACTACCTTTC .::...:x:...x........::----------------..x...:....:..x..x.:..x....:.....::..-----:.::.:..........:...---------xx...:.x::..xx..:x:x..:.x.:..:.xx:x.:...:x......:.....::.x..x.:x..::x.:.::x.:..x..x....:. 23M16I37M5I20M9D89M 105/169 62.1% 190/94230402 0.0% 30/169 17.8% 1059534 NA +3754 chr4 + 190214555 78043754 78043753 78043866 113 CTTCCTTCCTTCCTTCCTT-------CCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT----TTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCTCTCTCTCTC chr4 - 94230402 43081900 43081899 43082023 51148380 51148379 51148503 124 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTC ..:.........x.x.:.:-------:x.:...:.:..:.:..:...:.:...:x.::..:x.x..:.x..::xx....----....x.........:...........x.xx..:::...:.. 19M7I53M4I41M 76/113 67.3% 124/94230402 0.0% 11/113 9.7% 34961854 NA +3432 chr4 + 190214555 78043775 78043774 78043857 83 TTCCTTCCTT--CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCT chr4 - 94230402 19053884 19053883 19053968 75176435 75176434 75176519 85 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCT ..........--..:.:x..xx......:x..:..:.:......xx.....x:...:.::.:...:.......x::..x.x.... 10M2I73M 59/83 71.1% 85/94230402 0.0% 2/83 2.4% 58989891 NA +3302 chr4 + 190214555 78043784 78043783 78043863 80 TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCTCTCTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...:..x.x.:..x......:.xx.:..x.:...:.:......:............x...x.xx:..:.x:.::..x... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 59054967 NA +3084 chr4 + 190214555 78043788 78043787 78043871 84 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTTCTTTCTCTCTCTCTTTCTCTCTCTCTCTCCCTCA chr4 - 94230402 18988817 18988816 18988900 75241503 75241502 75241586 84 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCA .:.:..x.x.:..x......:.xx.:..x.:............::.:.........x...x.xx...::x:.::..x..:x:.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 59054971 NA +3007 chr4 + 190214555 78065025 78065024 78065105 81 ATTTTTTTTAAGTTAAGATTTCAGTTTTATAGTGTATATATATATATATATATATATATACATACACACACACACACTAAA chr4 - 94230402 20676183 20676182 20676263 73554140 73554139 73554220 81 ATTCCTTCTCATTTTCTATTTTTATTTTCTATTGTATGTATATAGGTATGTATATGTATACAGTCTTGCAAATATACCAAA ...::..:.x.x..xxx....:x:....x..x.....:......x:...:.....:......xx.x::..x.:.:..:... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 57388842 NA +3012 chr4 + 190214555 78067651 78067650 78067717 67 TTTTTCTTTTTTTTTCTTTCTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTTGTA chr4 - 94230402 4776681 4776680 4776747 89453656 89453655 89453722 67 TTTCTACTTTCTTGTCATTGTCTTATTATTACTATTATTACTAGTATTATAATCCCTATCTGTTGCA ...:.x:...:..x..x..x.:.........:........:..x......x..:x:...:xx...:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 73290970 NA +3036 chr4 + 190214555 78127635 78127634 78127691 57 ACAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAAATGGAACACAGGA chr4 - 94230402 32680546 32680545 32680602 61549801 61549800 61549857 57 ACTAACAAAAAGCCAAAAAAAAACCCAACAACAACAACAACAAAACAAAACACCAGA ..x......x.:x....x...x.xx....................:::.....x:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 45447089 NA +3143 chr4 + 190214555 78127635 78127634 78127678 44 ACAAACAAACAAACAAACAAACAAACAACAACAACAACAACAAA chr4 - 94230402 20093820 20093819 20093863 74136540 74136539 74136583 44 ACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAA .................x..x.x........:........x... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 58033815 NA +3123 chr4 + 190214555 78127641 78127640 78127694 54 AAACAAACAAACAAACAAACAACAACAACAACAACAAAATG---GAACACAGGAAGA chr4 - 94230402 34555120 34555119 34555176 59675227 59675226 59675283 57 AAAAAAACAAACAAACAAAAAACAACAACAACAACAGTATGCCAAAATACAGTATGA ...x...............x................:x...---:..:....x.x.. 41M3I13M 46/54 85.2% 57/94230402 0.0% 3/54 5.6% 43572521 NA +3228 chr4 + 190214555 78127645 78127644 78127737 93 AAACAAACAAACAAACAACAACAACAACAACAAAATGGAACACAGGAAGAGGATCGTTTAGAGGAAGGATGATGAAGTAAGTTTTTTTTATTT chr4 - 94230402 79230836 79230835 79230915 14999488 14999487 14999567 80 AAACAAACAAACAAACAATAACAACAACAACAAAAAAACCCACATAAA--------TTT-----AAATATGAAGGAGTTGATAGTTTTCATTT ..................:................x::xx....x:..--------...-----..:x....x.:...x::.xx....:.... 48M8D3M5D29M 62/80 77.5% 80/94230402 0.0% 13/80 16.2% -1103191 -93127211 +5345 chr4 + 190214555 78155767 78155766 78155943 177 TTCCCCCTCTCTTTTTTCTCT--------GTTCAGGAAATCAATTTG-GTTGAATTTCTTGTGTAGGGTGAAATCCATGGACTCGTACAGAGTTGGTGAGTGGGCCATCAATGGGATCTCTGTTAGCTCATTTTTCATCAGGGAGATACATTTCTTTCCCAAAGCTGTGATCTAGGAGAGTTGCCA chr4 - 94230402 58192073 58192072 58192252 36038151 36038150 36038330 180 TTCCCTCTCTGGGTCTCTTCTCAGGTATGGCCCAGGAAGCCCGGTTGTGTTTTATTCCCTGTGGATGATTAAACTTGAGTAGTTCTATA-AGCCGATGAGT-----ATCAATGGGATCTCTGTTAGCTTGTTTTTCAGCAGCAAGAGATGTGGCTTCCCAAAGGCTGTGAGTCAGGCAGGCTGCCA .....:....xxx.:.::...--------.::......::.x:x...-...xx...:.:....x.x.:.x...::::x.x.x.:x..:.-..::.:.....-----......................::.......x...x:...x.::.xx...:..x..:.......x::...x::.:..... 21M8I18M1I41M1D11M5D80M 116/171 67.8% 180/94230402 0.0% 15/171 8.8% 19963694 NA +3014 chr4 + 190214555 78161723 78161722 78161798 76 CAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAGTGCTCT chr4 - 94230402 36126939 36126938 36127014 58103389 58103388 58103464 76 CAAAGCCAAAAGACTCTCTCAAAAAAAAAAAAAGAAATAAAAGATGTACAGATAATGACAGAAGAAAGACTGATTT ...::x.....xx..x.................:...x....:.x:x.x...x..x:.x....:.:.:.x..x.:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 42034784 NA +3133 chr4 + 190214555 78183692 78183691 78183785 94 TATTTAGGATTTATCTTTTTTCTCCCTGTTTTCATTCTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAAATATAT chr4 - 94230402 70982591 70982590 70982681 23247722 23247721 23247812 91 TATTTCATATATATATTTATTC---ATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .....x:x..x...x...x...---x...xx::x..:..:............:.......:::.:...x::.:x:........:x..x.:.:.. 22M3D69M 61/91 67.0% 91/94230402 0.0% 3/91 3.3% 7201101 NA +3058 chr4 + 190214555 78187588 78187587 78187644 57 TGTTGCTATCCTTTTTTTTTCTTTTCTTTTTTCTGAGATGGAGTCTTATTCTGTTGC chr4 - 94230402 5847639 5847638 5847695 88382708 88382707 88382764 57 TGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..:.x....x..........:......::...:.....x.xx.....::..:x.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 72339949 NA +5092 chr4 + 190214555 78214637 78214636 78214961 325 ATTTTACAGCAGAAATTTCCCTCAAGCCAATAGGTTGCTTGTGCCAAAGCCAATTAATTTACTCATTCATAA--CTGAGAAAAACAG---CCCTGTACTGTGGGCAAGTGAGTTGTGCAGCT-TTACCTGGCTGTTGCTGGCTGTTTATTTTAATTTGTCTCCATGCACAGAACATTACTAGCCAGTCCTATCTTGACAACCTTGGATGAACTGAGGGGCCCTTGTCATGGAATTAGGGGACAAA----------AACCAGCCTTCTTTGCACCAAGGCTGTCCTCCCAGTTGTTATGATCTAGGACCATAGTCTGTGTTCCTGCAGATTAATGACTATGT chr4 - 94230402 58206409 58206408 58206735 36023668 36023667 36023994 327 ATTTTAGGCCTGATTTTGTTTTCAAGCCTGTAGCTTCTGTGTGCCAAAGTCAATTAATTTAACCACTTGTAATGTTAGGCAACACGGAGCCTATGTATT-----CAAGTAAAATACTGAGCTGTTACTTACCTTTTGCT-GCCATTAATTTCAGTTAGTT----TAGTCATAAAATGACCACCTTATTAAATCTGGACAGCTACCAGTGAACC-AAAGGCTCTTGAAACAATACCAGAAGACATGAGGACTGCCTAAGAAATCTCCTTTTCTATAGGCCTTTCCT---AATCATTTTTGCACAGTAATGAAGCCTTTGTTCATGGAGATTAATGGCTCTGT ......x:x.x..xx..x:::.......x:...x..x:x..........:...........x:..:.::...--:.::.x..x..:.---.:x....:.-----.....:.:x.::xx....-....:.:x..x.....-..::..x....:.:..x..:----.:xx..x..x..x..:.x.:x:.:xx....x....:.:x:x::.....:-.::...:....xx.:::x.::..::....x:----------..xx.::..:....x.xx:.:.x..x....---.:.::..x.x::x:..x.x::x..:..x.....x..x.........:..x... 72M2I13M3I9M5D18M1I16M1D20M4D49M1D31M10I30M3D53M 192/311 61.7% 327/94230402 0.0% 30/311 9.6% 20008228 NA +3423 chr4 + 190214555 78217926 78217925 78218066 141 TCCCCTTCCCCTCTCCTCCCTTCCCCTCCCCTCTCTTCCCCTCCCCTTCCCCTCCCCTCTCTTCCCCTCCCCTTCCCCTCCCCTCTCTTCCCCTCCCCTTCCCCTCCCCTCCCCCCTCCTCTCCTCTCTTCTCTTCCTCTC chr4 - 94230402 26928843 26928842 26928976 67301427 67301426 67301560 134 TCTCCCGCTTCTCGCATCCGCACCTCTGCCCTCGCTTCCTTCACCCGCTCCCTTCCC-------CCATCCTTTGTTTTTCACCACCTCGGATCTCCCCTTCCCCATCTCGCCCCCCCCCGGCCCATTCCCCCGATTCCCTC ..:..:x.::...x.x...x:x..:..x.....x.....:::x...x::....:...-------..x...::.x::::..x..x.:::xxx:............x:.:.x......:..xx:..x:..::.:xx.:.:... 57M7D77M 79/134 59.0% 134/94230402 0.0% 7/134 5.2% 51289083 NA +3909 chr4 + 190214555 78217936 78217935 78218040 105 CTCTCCTCCCTTCCCCTCCCCTCTCTTCCCCTCCCCTTCCCCTCCCC-------TCTCTTCCCCTCCCCTTCCC----------CTCCCCTCTCTTCCCCTCCCCTTCCCCTCCCCTCCCCC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC ..:x...:..xx....::....:.:...:..:.....:.::...:..-------.:.:x..:.....:.:...:----------..x..:..x.x.....x.:x..::...........::. 47M7I20M10I38M 72/105 68.6% 122/94230402 0.0% 17/105 16.2% -13956892 -80273510 +3448 chr4 + 190214555 78218007 78218006 78218105 99 CCTCTCTTCCCCTCCCCTTCCCCTCCCCTCCCCCCTCCTCTCCTCTCTTCTCTTCCTCTCTCTCTCCCTTCTCTCTCTCTCTC---ACTCTCTCTCACACAC chr4 - 94230402 61964774 61964773 61964875 32265528 32265527 32265629 102 CCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACAC ...x.:.::.:x.:x::....:::::..::...:...............:.......::.x..x:x.x.x.x:....::..:.---:...:.:.:.x..... 83M3I16M 62/99 62.6% 102/94230402 0.0% 3/99 3.0% 16253233 NA +3460 chr4 + 190214555 78218014 78218013 78218099 86 TCCCCTCCCCTTCCCCTCCCCTCCCCCCTCCTCTCCTCTCTTCTCTTCCTCTCTCTCTCCCTTCTCTCTCTCTCTCAC-TCTCTCTC chr4 - 94230402 18501285 18501284 18501371 75729032 75729031 75729118 87 TCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTC ....:.:x....:..x.....:......:....:::.:.:...:.::.:.:x...:x..:x:xx.:.......x:...-.....:.. 78M1I8M 57/86 66.3% 87/94230402 0.0% 1/86 1.2% 59716729 NA +3002 chr4 + 190214555 78218059 78218058 78218128 70 TTCCTCTCTCTCTCCCTTCTCTCTCTCTCTCACTCTCTCTCACACACACACACACACACACACACACACA chr4 - 94230402 32106681 32106680 32106750 62123653 62123652 62123722 70 TTTCCCTCTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA ..:.:....:x.x:.:.x:.:..::..:...x.:x::.:...::::...............:....x... 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% 46111378 NA +13845 chr4 + 190214555 78222732 78222731 78223026 295 AGTCCCTTTCATCTTATCATTGTTC---TCAAAGGCACAGCTCTGCAAACCACATAGAGGCCTTTCAACTTCCGCTGCATTTTGTTTTATTCAGCCAATTGACTAGTACTGTCAGCTAATTGGATTGGAAATGTAAAATGAAAGCTGTATTATTCAGCTGCCAAGCCTCCTCACTTGGCAGGGAGTGGGTGATGCTGGTAATTGTACCAGAAGTGTAATTGCTCTGGGTTCTGCCTCTGGATTTAACAATGAACCCTGGGAGGGTCTTCCTCTGAGACACTTGATACCTGCTTCTTTT chr4 - 94230402 58211794 58211793 58212084 36018319 36018318 36018609 291 AATTCCTTCCATCTCTTCATTGCTCCGCTCACAGATCCATC-CTGCAGACCACGCAGTG----CTCAGCTTCCCTTACGCCTGGGTTTATTCTGCCAATTGCCCGATATTGTCAGCTAATTGGAGTGGAAATGATGAATGAAAGCGCTATTATTGAGTTGCCAAGTCTCCTCACTTGGCAGCTGGTGGGTGATGCTGGTAATTGTTACCAAAGTGTAATTGCTCCGGGCTCTGCCCAGGGTTTCAACAAAGCAGCCTCATATTG--CTGCTCTGGGACACCTGATACCTGCCTTCCTT .:.:....:.....:x......:..---...x..::x..x.-.....:.....::..x.----:...:.....x:.:.:::.x.x.......x........x.:::..:...............x........xx:.........xx.......x..:.......:...............xx:.....................xx.x:..............:...:......:xx..x..:.....x.x.x...x:x.xx.--:.x.....:.....:..........:.:::.. 25M3I13M1D17M4D201M2D32M 218/288 75.7% 291/94230402 0.0% 10/288 3.5% 20010938 NA +7765 chr4 + 190214555 78237491 78237490 78237623 133 AGCTTATGCCTCTTTACAGGATGCCACAATTTGGAAGCCCGATTCATGCCAGAGCTGCCGTTGCCATGGTGATATTGTTATCTGCAAACCTGCTGTTTGCAGAAACCCTCAATGTGCCTTTGAGAAGGTACGG chr4 - 94230402 58217763 58217762 58217895 36012508 36012507 36012640 133 AACGTTTGTTTCTTTGCAGAATAACACAATTTGGAAGCCAGATTCTTGCCAAGACTGCAGTTGCCAAAGCAATGTTGTCACCTGTGAACCTGCTGTCTGCGAACATCCTCAGTGTGACTTTGAGAAGGTAAGG .:.x.x..::.....:...:..:x...............x.....x.....:::....x.......x:.::..:....:.:...::..........:...::.x.:.....:....x.............x.. 133M 101/133 75.9% 133/94230402 0.0% 0/133 0.0% 20019728 NA +5038 chr4 + 190214555 78245231 78245230 78245336 106 AGGGAGAAGTGCTTCAAATAGCTGCCAACCAATGCTGTCCTGAGTGTGTTTTGAGGACTCCAGGATCTTGCCATCATGAAAAGAAAATCCATGAGGTAAGTGTTTT chr4 - 94230402 58220746 58220745 58220851 36009552 36009551 36009657 106 AGGGAGAAGTGCTCCAAATAGCCCCAAACAAATGTTGCCCTAAATGTGCCTCACAAACTGAAGGATATTGCCAGCATGAAGGACAGATCCACAGTGTGAGTACTCT .............:........:x.x...x....:..:...:.:....::.::x::...xx.....x......x......:::x.:.....:::x..:...::.:. 106M 73/106 68.9% 106/94230402 0.0% 0/106 0.0% 20024485 NA +7347 chr4 + 190214555 78255226 78255225 78255416 191 TTCTTTGACCTTCCAGAACCCTGTTCCTATGAAGGCCATGTGTTTCAGGATGGGGAGGACTGGCGGCTGAGCCGGTGTGCCAAATGTCTGTGTAGAAATGGGGTTGCCCAGTGCTTCACAGCTCAGTGTCAGCCTCTATTTTGTAACCAGGTAAGGAAGACAACCTCAGCATGCAGCCTTCACGGGCTATT chr4 - 94230402 58223930 58223929 58224109 36006294 36006293 36006473 180 TTTTGTTATTTCTTAGAGCCCTGCTACTTTGATGGCCGTTCGTTCCGGGATGGTGAGGACTGGCGCCTTGGTCGGTGCTCCAAATGTGTCTGCAGGGATGGCGTGACTCAGTGCTTCACAGCTTCCTGTGAGGCTGTTCTGTGCAAACAGGTCAGGA-------CTCA----GCAGCCTTCTGGGGACACT ..:.x.x.::.:::...:.....:.x..x...x....:.x:...:.:......x...........x..x:.:.....:x........x.x..:..::....x..x:.:...............:xx...x..x..x.x:.x..:..x.....x....-------....----.........xx...x:.:. 157M7D4M4D19M 129/180 71.7% 180/94230402 0.0% 11/180 6.1% 20031296 NA +9681 chr4 + 190214555 78267223 78267222 78267439 217 TTCCTCTCTGTG------------TCCTAGGGTCAGAGCAGGGCTCGGCGTCATGGGCAATGCTGTGAGGAATGTGTGTCTCCTGCCGGGAGCTGCTCCTATGATGGAGTTGTGCGGTACCAGGACGAAATGTGGAAGGGCTCGGCCTGTGAGTTCTGCATGTGTGATCATGGCCAAGTGACCTGCCAGACTGGAGAGTGTGCCAAAGTGGAGTGTGCCCGGGTAAGAA chr4 - 94230402 58227370 58227369 58227598 36002805 36002804 36003033 229 TTCCTCTCAGTGGTATTCGATGCTTTGTAGGGGGATAACAAAGTGCAGCGTTCCGGGAAGTGCTGTGAGGAGTGTGTGTCTTCCAAGGAAAACTGCTTGTATGATGGCACTATCAGGTACCACGGTGAGATGTGGAATATTACTCGCTGTGACTTCTGCATGTGTGATGAAGGTCAAGTGACTTGTCACAAAGCAGAGTGCGCCAAAGTAGAATGTGCCAAGGTAAGAA ........x...------------.:x.....xx.x.:..::.:x.:....:x:...x.:...........:.........:.::xx.::.:.....:x........x::.:.xx.......x.::..:........x:x:x.xxx......x...............x.x..:........:..:..x.xx.x......:........:..:......x:........ 12M12I205M 156/217 71.9% 229/94230402 0.0% 12/217 5.5% 20039853 NA +7938 chr4 + 190214555 78278562 78278561 78278754 193 ATTCCAGTCAGGGAACCCAACTGCTTCTCAATTTAGCCCTGCTACCTGGAGATGTTAATTTGATATGTGCCACTGCAACCCTTATTTCTACAGGATGAAGAATTAATTCACTTAGATGGAAAGTGTTGTCCTGAATGCATTTCAAGGAATGGTTATTGTGTTTATGAAGAAACTGGAGAATTTGTGAGTATCA chr4 - 94230402 58231221 58231220 58231412 35998991 35998990 35999182 192 ATTCCAGGGCGAGAGCTGCTCTGCCTCTGCATTCCACGGTATT-TTTGGTATTGTTGATTCCATTTGAATTGCTGCAAGCTTTCTCTTCACAGGGTGAAGAATTAATTCACTTAGATGGGAAGTGCTGTCCTGAATGTATTTCAAGTAATCGTCATTGTTTTTACAAAGGACATACCAAAGCTGTAAGTATCA .......xxx.:..:.:xxx....:...xx...:x:.xx.::.-::...x:x....:...:x..x..x::::......x.:..x.:.::.....:........................:.....:...........:........x...x..:.....x....::...:.xx.:xx:..x:...:....... 43M1D149M 133/192 69.3% 192/94230402 0.0% 1/192 0.5% 20047341 NA +6275 chr4 + 190214555 78284377 78284376 78284551 175 TTCTCCCCTTCTTTGTCCTTGATTT----CAGTTCATTGCCATCCAGATTGTTTGACATGCTCTCAGTCTCCAGACCACTGTGACCTCTGCCAAGATCCTACCAAGTTACTGCAGAATGGATGGTGTGTGCACAGCTGTGGACTGGGTTTTTACCAAGCTGGCAGTCTCTGTTTAGGTA chr4 - 94230402 58235473 58235472 58235649 35994754 35994753 35994930 177 TTTTGCCCTT--GTGTCTTTTCTTTGCACCAGGAAAGTGCCACCCAGACTGTTTGACCTGCTCGCAGTCCTTTGATCACTGTATTGCCTGCCGTGATGTGAAGAAGCAGCTGCAGAATGGGCGCTGTGTGGAGAGCTGTGGGTCAGGCTTCTATCAGGATGGGGGGACTTGCTTAGGTA ..:.x.....--x....:..xx...----...xxx.x.....:.....:........x.....x.....:::x..:......:x:x:.....:x...x:x.xx...:x:...........::.x......x.x........::::..:..:..:..:.x...x:.xx::..:....... 10M2D13M4I150M 118/173 68.2% 177/94230402 0.0% 6/173 3.5% 20048904 NA +5912 chr4 + 190214555 78286419 78286418 78286546 128 TGCTCCACGTGTACCAGTGGGCTGGAGTGCTCATCCTGCCAGCCTCCCCTGCTGATGCGGCACGGGCAGTGTGTGCCTACCTGTGGGGACGGCTTCTACCAAGATCGCCATTCCTGTGCAGGTAATCT chr4 - 94230402 58235961 58235960 58236088 35994315 35994314 35994442 128 TGCTCAGCCTGTACGAATGGTTTTGAGTGTTCCTCATGCCAGACGTCCCTGCTGATGAAGAATGGGCAGTGTGTGACTTCATGTGGGAAGGGATTCTTTCAGGATCAACTCATATGTGCAGGTAACTT .....x:.x.....x.:...x:.x.....:..x..x......x.x:...........x:.x.:............x..x.x......:.x..x....x:..:....:x.x:x:x...........::. 128M 92/128 71.9% 128/94230402 0.0% 0/128 0.0% 20050458 NA +10552 chr4 + 190214555 78288435 78288434 78288680 246 CATTTTCCTTTCTCCCATGCCCGTTGTTTTAATTGGTGATGCTAATGCTAGTTTAGGGCATTTTGAAATGGGTAATGTTTCATTTGATTAGTGGTTTACGTAGCTCACTGCTTC-ACATTCCATCCACATATCTACACACAAATGCCTCTAGTAGAAAGTTGCTGGGAAAATTTGTTCATGCTCCCTCCAGGGAATTAAACCAATTTGCTTTAGTTCAGGCTGGTTGCATTTTTATGCATAAAATAA chr4 - 94230402 58237367 58237366 58237610 35992793 35992792 35993036 244 CATTTCCTTTCCACCTGCTACCAGTATTTTAATTGGCAGTTCCTATGTACTGCTGAAGCAGGAGGGAAAGGCTAATGTTTCATTTTATTACTGGTTT--GTAGATTACTGATTGGACATTCCATCCAAATTTGCAGTCACGCATGCTTGTAGTTGAAAGTTGCTGGGAAAATTTGTTCCTGTTTCCTCAGGGGAATTAAACTGATTTGCTTTAGTTCTGCCTGGCTGCATTTTC-TGGATAAAGTAA .....:.:..:.x..:::xx..:x.:..........:::.x.:x...:xxxx:.:::...xxxx.:..x..x.............x....x......--....x.:....x..x-............x..x.x:.xx...:x....:.x....x........................x..:.:....x:...........::..............x.x....:........:-..x.....:... 97M2D15M1I119M1D12M 179/243 73.7% 244/94230402 0.0% 4/243 1.6% 20051068 NA +3108 chr4 + 190214555 78291950 78291949 78292055 106 TTTAACCTCTCTGAACTTCAATTTTTTCAACTGCAAAATGGGGACGATATTATCTACTTTAAACCATTATTATGAAGGTTAGAAAAGCTGTTTGAAATGTATAAAT chr4 - 94230402 7135896 7135895 7136001 87094402 87094401 87094507 106 TCTAACCTTCCTGTGCTTTAATTTCCTCAACTGTAAAACAGAAAGGACAGCACAGACCTCAAGGGGTAGTAATTAAGGTTTCTAAAGTACTTCAAGATCTTCAAAT .:......::...x:...:.....::.......:....::.::.x..:.x:.:xx..:.:..:xx:.x:.x..x......xxx....:xx..::.:..x.x:.... 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% 71156054 NA +6142 chr4 + 190214555 78308031 78308030 78308223 193 GTAGATTACTCACTGAT--TTTGCTATTCGT--CTGCAGTCTGCCATGAGTCCTGTGCAGGTTGCTGGGGCCCAACGGAGAAGCACTGCTTGGCCTGCAGAGATCCCCTCCACGTGCTGAGAGATGGCGGCTGTGAGAGCAGCTGTGGAAAAGGCTTCTACAACAGGCAGGGCACCTGTAGCGGTGAGTGCTGGGTT chr4 - 94230402 58244569 58244568 58244765 35985638 35985637 35985834 197 GTTGATCATTCATTAATCTTTTACCTTTCTTTCCTGCAGTTTGTCATGAGTCCTGTTCCTCGTGTTGGGGACCTGCTGACAACAGTTGTCTCTCCTGCAAAGACACGTCACATGTGCTAAAAGCAGGGCTCTGCGTGGCCAGCTGTGGAAAGGGATTTTATGAGAAGGATGGAATCTGCAGTGGTAAATGCCTGTTT ..x...:.:...:.:..--...:.:x...x.--.......:..:............x.xxxx..:.....x..x:.x..x..xx::..::.xx......:...:x.x::x..:.....:.:..xx..xxx...:.x.:x............:..x..:..::.x.:.x.x..x.:...:..:...:.:...:x.x.. 17M2I12M2I164M 126/193 65.3% 197/94230402 0.0% 4/193 2.1% 20063462 NA +6246 chr4 + 190214555 78333235 78333234 78333635 401 TTTCCTGATTGTCTCCTTTGCTTTATCTTTCCCCCAGCTTGCCACCAGTCCTGTTTCAGATGTGCAGGGAAAAGCCCACATAACTGCACAGACTGTGGGCCTTCCCATGTGCTGTTGGATGGGCAGTGCCTCTCCCAGTGCCCAGATGGCTACTTTCACCAGGAAGGTAGTTGCACAGGTGAGTATGTAATG--------------------TGCTGAGGCACATTGCCTATGACCATGTTTTGTCTTCAGAGCATAGCCAGACACTGTAATTAGAAACCTTGTCATACCGGGGACTAAGATTCAGCTGTAAATCCTTGTCTTGAACTTGCAGATTCAAAGTATAGAGGGAGGGGAACA----AGTGAAATTT-----------AGCTCTTCCA----GTAAGGAAGCATGGA-----AATAAAACATTAGAATCAGCTTTACCC chr4 - 94230402 58251314 58251313 58251714 35978689 35978688 35979089 401 TTTTTCGCTTCTGTCTTTGTTTTTTGCTTCCCTGCAGAGTGCCACTCCTCCTGTGCAGGCTGCATAGGGAACACTTCCCAGGACTGTACGGCCTGTCCGTCTTCGCACATGCTGCTCGAGGGCAGATGCCTCTCCGAGTGTCCAGAGGGGTTGTTCAGCCAGCAGGATCACTGCTCCTGTAAGTGCATAGTGCAGGCACCCGCAGCTTATACTGCTGAATTTCATTGCATG----CACGTTCTGT----AATGCATTTCTAAA---TGTAATTAGAGATGCTGTCA-------GATTTATATGAGGC-----------------AATTT---------AAGTATTTTCAGGGGAGAATAGAGTAGTCCAATTTTGGGAAATGGAATCTCTTCCAAACGGAAGGGAAGCATACACGTTGAATCATAAATTATAATCAGTTTTACTC ...:::.x..x.x..:..xx:...xx...:..:x...xx......:xx......x:x:.x..:::......x.x::.x..x:....:..:.x....xx.:....x..::.....:.x..x..xx::.........x....:.....x..x.xx..:x:....x.:.:.x::...x.xx..:...:::..:..--------------------......:x:x......x.:----..:...:...----.:x....xx.:.:.---..........:.:x:.....-------..:.x.x..xx:..-----------------..:..---------......xxxx:.:..:...:.----...xx.....-----------.x........----.x.:........:x.-----...x.x.x....x......:.....:. 192M20I19M4D10M4D14M3D20M7D14M17D5M9D21M4I10M11I10M4I15M5I27M 237/357 66.4% 401/94230402 0.0% 88/357 24.6% 20081921 NA +3682 chr4 + 190214555 78334834 78334833 78334916 83 CTGCAGCCTTGAACTCCTGGGCTCTAGTTATCCTCCTACCTTAGCCTCTCAAGTAGCTGGAACTATAGGCATACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x:.:..:.....:..x...xx.:.x.xx:x..:.....:.................:.--.:.:......::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 60137708 NA +6128 chr4 + 190214555 78337670 78337669 78337827 158 CCAGAGTGTCACCCAACCTGCAGGCAGTGTCATGGGCCGTTGGAGTCTGACTGCATCTCCTGTTACCCTCACATCTCTCTTACCAATGGTAACTGCAGGACCAGCTGCAGGGAAGAGCAGTTCCTCAACCTCGTGGGATACTGTGCTGGTGAGTGAAA chr4 - 94230402 58253548 58253547 58253705 35976698 35976697 35976855 158 CCAGCCTGCCATCCGTCATGCAAGACATGCCATGGCCCTTCTGATTTGGAGTGCTTAACCTGCCATCCCCATGCAACTCTGGCTGCTGGAAGGTGCAGGACTAGCTGCAAGGAAGAGCAGTATCTCAACTTGGTTGGATATTGCGTGGGTAAGTAAGA ....xx..:..:..:x.x....:.xx:..:.....x..x.:x..x.:x..x...x.xx....::.:..:..:::xx....x:.::x...x.:x........:.......:...........x:......:.x..x.....:..:.:x...:...:.:. 158M 104/158 65.8% 158/94230402 0.0% 0/158 0.0% 20084122 NA +3071 chr4 + 190214555 78338275 78338274 78338336 62 TTTTTTCTTCCTCATTTTAGAACTCAGATCTAAAAAAAAAAATTAGGAAAGCAGTCTGAAAT chr4 - 94230402 84590405 84590404 84590466 9639937 9639936 9639998 62 TTCTCACTTCTTCCTTTTAGAACTCAAAAATAAAAAAAAAAAAAGAAAAAGCCATCTTAAAT ..:.:x....:..x............:.xx............xx:::.....x:...x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% -6252130 -87978272 +4322 chr4 + 190214555 78342249 78342248 78342457 209 TAATTGTACTTAGCTGTTTAAAAAAGAAAATGACATCAAATCCAGCACACCGCCAAGAGTAAACCCATCCTGGGAGCAGGTCCAGTAACCTCAGTGTGTCTCACATATGGAGATGTCATATGTGTGGGGTTTCTTCCTCCAAGTCTATCAAAGCAAATATAAAGTATGTGAGATTTAGGCCAGAGCTGCAGGTTTTCAACAAAGATAAA chr4 - 94230402 58254580 58254579 58254761 35975642 35975641 35975823 182 TGATTGCATTTACTTGTTTAAAAAGAAAAATCACTTTTAATCCATCACACAGACGCATATAAACATATCCTGGGAAGAGCTCCAGCAATTTCTGAGCTT------TATCAAGCCAT-------------TTTTTTTCTTTA--TCAATAAAAG-----ATTCAGTATCTGAGGCTTATGCTAG-GTTGAACAGTTCCATATGAGATAAA .:....:.:...x:..........::.....x..x.:x......x.....x.x.:x:x:.....x:.........:x..x.....:..::..x.x.:x.------...x:..x::.-------------...:..:..::.--..x..x....-----..xx.....x....::...x..:..-.:..x.x:x..:..xxx:....... 99M6D11M13D12M2D10M5D25M1D25M 123/182 67.6% 182/94230402 0.0% 27/182 14.8% 20087669 NA +3074 chr4 + 190214555 78346685 78346684 78346771 87 TTATATTATCTGATAAAACAAAACAAACAAACCTCATCTTTTCTCCTCAAATCTTTCTCTTCTATTACCTCTTTTTCCTTCCTTTGA chr4 - 94230402 51361184 51361183 51361270 42869133 42869132 42869219 87 TTAAATTGTCTTTTAAAACAAAACAAAAAAACCCTCTATTTTTTGATTAATTTATTCTTAACGGTTGGCTTTGCTACTTTCCTCTGA ...x...:...xx..............x.....::x.x....:.xx.:..x.:x....:xx.x:..:x..:.x:.x.:.....:... 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 26985501 NA +10319 chr4 + 190214555 78363496 78363495 78363672 177 TCCCCTTCCCCCTCCAGACTGCCATCACCTGTGCCAGCACTGTGCAGCTGATCTCCACAACACTGGGAGCATCTGCCTCAGGTGCCAGAATGCCCACTACCTGCTGCTCGGGGACCACTGTGTTCCTGACTGCCCTTCAGGATACTATGCAGAGAGAGGAGCTTGTAAAAGTGAGTA chr4 - 94230402 58261740 58261739 58261916 35968487 35968486 35968663 177 TCTCCTGCTTCCTTTAGACTGCCATCCTTTGTGCCATCAGTGTGTGGCCAACCTGTGGGACACTGGCAGCCTCTGTCTCAAGTGCCAGAATGCCCGTCACTTGCTCCTTGGGGATCACTGCGTTCCTGACTGTCCAGCAGGATACTACACAGAGAGCGGCGCCTGCAAACGTGAGTA ..:...x.::...::...........x::.......x..x....::..::.:..x::x:.......x...x....:....:..............:::..:....x..:.....:.....:...........:..xx..........::.......x..x..:..:...x....... 177M 134/177 75.7% 177/94230402 0.0% 0/177 0.0% 20101756 NA +7498 chr4 + 190214555 78363900 78363899 78364087 188 CTCTGCAGAATGCCACTCCTCCTGCAGAACCTGCCAGGGCAGAGGACCTTTCTCCTGCTCCTCATGTGACACCAACCTCGTGCTGTCCCACACTGGCACCTGCAGCACCACCTGCTTCCCTGGGCACTATCTTGATGACAATCATGTTTGCCAGCGTAGGT-TTTTCCAATGAACCTTCTCTCCTTTCC chr4 - 94230402 58264220 58264219 58264408 35965995 35965994 35966183 189 CCCTGCAGGATGTCACCCCTCATGTAAAACCTGCAGAGGTAGGGGTCCTCTTTCCTGCTCCTCCTGCAACACCAGCCTGGTTCTGTCCCACACCAGCATGTGCGTTCCAGTCTGTTCTCCGGGATACTACAAGGATCAGAGCCAGACCTGCAAACGTGAGTGTCTCCCTCCAAGCCATCTGTGCTTTCC .:......:...:...:....x..:.:.......x::..:..:..x...:.:...........x..::......:...x..x...........::...:x...:x:x.x::...:.::..x..::....:xxx...x.x.::..x:::...x.:...::..-.:.:..xx::.:..x...x.x...... 161M1I27M 124/188 66.0% 189/94230402 0.0% 1/188 0.5% 20099680 NA +7947 chr4 + 190214555 78372707 78372706 78372864 158 TTTCTTTTTAGAGTGTGATTGGAGCTGCAGTGCATGCAGTGGGCCCCTGAAAACAGACTGCCTGCAGTGCATGGATGGCTATGTTCTCCAGGATGGGGCCTGCGTGGAGCAGTGCTTGTCATCATTTTACCAGGACTCGGGCCTCTGCAAGAGTAAGT chr4 - 94230402 58268980 58268979 58269137 35961266 35961265 35961423 158 TTTTCTTCCAGAGTGTGACTGGAGCTGCAATGCTTGTAAAGGCCCTCTGAGGACCGATTGCCTGCAGTGTATGGAGGGTAGTGTACTCCACAAAGGAGCTTGTGTGGAACAGTGCCCCACAGCTTTCTACAAGGAGTCAGACATGTGCCAGAGTGAGT ...::..::.........:..........:...x..:.:x..x..:....::..x..:...........:.....x..:x:...x.....x:.x..:..:..:.....:......::xx..x.x..:...x....x..:.:.x.x...x.....:... 158M 114/158 72.2% 158/94230402 0.0% 0/158 0.0% 20103727 NA +7246 chr4 + 190214555 78374092 78374091 78374315 224 CTTGACTTTTGTCTTTCAGACTGTGACAGCTACTGTCTCCAGTGCCAAGGTCCCCATGAGTGTACCCGCTGCAAAGGGCCATTTCTCCTCTTGGAAGCCCAGTGTGTCCAGGAATGTGGGAAGGGGTACTTTGCAGATCATGCAAAGCACAAATGCACAGGTAACTTGGAGACTGCTGATTATTCTGGAAAGAAGTGAGGGCAGCAAGTAAGTCACATGTGCTG chr4 - 94230402 58269327 58269326 58269549 35960854 35960853 35961076 223 CTTTGCATGTGGTTTTTAGGGTGTGATCAACATTGCCTTCAGTGTCACCAAGCAAATGAGTGCAGCCTTTGTGAAGCCCCATTTTTCCTCTTGGACACTCAGTGCGTTTATAAGTGTGGGAAGGGATATTATGCAGACCACGCACAGCGAAAATGCATAGGTAA-GCAAAGTGAGCGTGATGTGGTGGAGAGGAACCAAGGTTGTAGGTGTGTTCTGTGTACTG ...x:.x.x..x:...:..:x.....:x:x:.:..:..:.....:..xx:xx.xx.......:.x..x:..::...xx......:..........x:.:.....:..::.x:.:...........:..:.x......:..:...x...:x.......:......-x:::..xxx..xx:x.:.xx....:..:.::x.:..:x.:.:..:x..:x::...:... 164M1D59M 140/223 62.8% 223/94230402 0.0% 1/223 0.4% 20104765 NA +5059 chr4 + 190214555 78375694 78375693 78375896 203 GTGTTGCCTTGATTGAGCCTCATT----TAGTGTTTCCTTTTTTA-ATAGCCTGCCCTCAGGGGTGCTTGCAGTGCAGCCACAGGGACCGTTGTCACCTCTGTGACCATGGGTTCTTTCTGAAGAGTGGCCTCTGTGTTTACAACTGTGTTCCTGGCTTTTCTGTCCACACCTCTAATGAAACATGTTCTGGTAAGTGCTTCTCCTCA chr4 - 94230402 58270030 58270029 58270237 35960166 35960165 35960373 208 GCACTGTTTTAACTGTGTCTCAGTAGGGTTGTGTTTTCTGTCTAATGCAGCTTGTCCTCACGGGTGCTTGGAGTGTGACAGTGACGGCCTTTGCCACCTCTGTGATGGCAACACCTTTCTGAAAAACAAGATTTGCGTTTCTGCCTGTGGACAGGGATTCTATGGCAATAAGTGGACCAGAGAGTGTGAAGGTGAGTGCCTCTCCTTA .:::..::..:.:..x.:....x.----.x......:..x.:.x.-::...:..:.....x.........x....:::.x::::x.:..x...:...........:x::::xx:.........:.::::xx.:..:....x::x.....xx.xx..x..:.x..x.x.:.xx.xx.x:::.:x:...xxx...:.....:......:. 24M4I17M1I162M 121/203 59.6% 208/94230402 0.0% 5/203 2.5% 20105664 NA +11030 chr4 + 190214555 78379718 78379717 78379998 281 TTTTTCAGGCAAAATACACACCCCTAGTCTTCATGTGAATGGTTCCCTGATCCTCCCAATTGGTTCAATAAAGCCACTGGATTTTTCCCTCCTGAATGTCCAAGACCAGGAGGGTAGGGTCGAAGATCTCCTATTTCATGTTGTGAGCACTCCCACCAATGGTCAGCTAGTGCTCTCAAGAAATGGAAAAGAGGTTCAGCTGGACAAGGCTGGCCGTTTTAGCTGGAAAGATGTGAACGAGAAGAAAGTGCGTTTTGTGCACAGCAAAGAAAAACTCAGGT chr4 - 94230402 58270801 58270800 58271081 35959322 35959321 35959602 281 ttttttAGTCAGCAGGCATCCTTCAAGCTTCCGTGTAAACAGTACCCTCACAGTAGGGATTGGTGGGGTAAAGCCTCTAGACCTCTCCTTACTGGATGTGCGTGATCTGGATGGTGACACAGGACAGCTCTTGTTCCATATTGACAGCGCTCCCTCCAATGGCAGGCTAGTGATGGTGGTGAATGGGAAAGAAGCGCAGCTGAGCAAAGGTGACCACTTCAGCTTCAAGGATGTGAAGGAGAATAGAGTCCGCTTTGTGCACAGCAGAGAGAAATCCAGGT .....:..x..:x.x:..:x.::.x..::.:.:...:..::..x....x.:xx.xxx:......xx::.......x..:..::.:...:.x...:....x.:x..:.x...x...::x::x.:.x.x...:.:..:...:...xx...:.....x.......:x:.......x.xx:::x:.....:.....:.:x......::...:.x..:..::..:....xx..:........x.....x.:...x..:.............:...:...::..... 281M 184/281 65.5% 281/94230402 0.0% 0/281 0.0% 20108917 NA +6181 chr4 + 190214555 78384022 78384021 78384152 131 TTGTATTTTCTTATTCCTT----TCTTTGGGACTTCTTTAGGAAAGGTTACCTTTTCCTGAAAATTAGTGACCAGCAGTTCTTCTCTGAGCCACAGCTGATCAACATACAAGCATTTTCAACACAGGTAATAAAA chr4 - 94230402 58272237 58272236 58272368 35958035 35958034 35958166 132 TTATATTACCTTGTATTTTGGCTTGTTGGGAACTTCTTTAGGAAAGGACAGCTTTCCTTGAGAGTCAGCGATCAACAGTTCTCCCAT---CCTGAGGTGATCAACATTCAAGCATTTTCAACACAGGTAATGTAA ..:....x:...:.x::..----.x..x..:................x:.x....:.:...:.:.:..:..:..:.......:.:x.---..xx..x..........x.......................:x.. 19M4I64M3D45M 98/128 76.6% 132/94230402 0.0% 7/128 5.5% 20111785 NA +3035 chr4 + 190214555 78384914 78384913 78384986 73 AAAAAAAAAAAAAAAAGACTGTCTTTATCTTTAGGTAAAGGAGTTTGTTTTATCTCTCTCTAGTATGTGGAAT chr4 - 94230402 40069584 40069583 40069656 54160747 54160746 54160819 73 AAAAAAAAAATAAAAAAACTGGCTTTTCTTTTAGTTATACTAATTTTTTCAATCTTTTTTTAGTTAATAAAAT ..........x.....:....x....x::.....x..x.xx.:...x..:x....:.:.:....xx:.::... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 38315330 NA +11601 chr4 + 190214555 78387372 78387371 78387704 333 CAGGCCCCCTATGTGCTGAGAAATGAAGTTCTCCACATTAGCAGAGGAGAGAGGGCAACCATCACCACCCAGATGCTTGACATCCGAGATGATGACAACCCACAGGATGTGGTCATTGAAATAATCGATCCTCCACTTCATGGCCAATTGCTTCAGACACTTCAGTCCCCGGCAACCCCTATCTATCAATTCCAGCTGGATGAACTCTCTAGAGGCCTTCTCCACTATGCTCATGATGGTTCAGACAGCACATCCGATGTTGCAGTCTTGCAGGCCAATGATGGACACTCCTTCCATAATATACTGTTCCAAGTGAAGACCGTGCCTCAGGTA chr4 - 94230402 58274985 58274984 58275317 35955086 35955085 35955418 333 CAGGCCCCCTATCTGCTGAGAAATGAGGCCCTCCTTGTCCGCAGAGGGGAAATTGGAACTATAACAGACCTGTTGCTTGATGTGAGAGATGGTGACAATCCTCAGGATGTCATGTTGATGGTTTTAGAGCCTCCACGTCATGGTCAGCTGATAAAACCTCCCAGGGACTCAGCTTCTTCAGTCTACATGTTCCACCTCGATGACCTTGCTGGTGGACTGCTACGTTATGCTCACGATGGCTCTGACACCCAGGATGATGCAATTCTTCTGCAAGTGAACGATGGATACCACTTCCAGAACATCCTGTTCCACATTAAGATCGCTCCCAAGGTA ............x.............:.::....x::.:x.......:..:.xx.x...:..x..x:x..x.x.......::.xx......:......:..x........x:.xx.x:x::.xx.x..x.......x......:..::..x.xx.:x.x.::x:.xx.:.:..xx.::.x:....:xx:.....x..x.....x..:x..:.x..x..x..x.::........:.....:..x....x.xx:xx:....:x::xx.::....:.:x..:......:..:x......x..:..x........x:.x....:..:x..:x..... 333M 216/333 64.9% 333/94230402 0.0% 0/333 0.0% 20112387 NA +10445 chr4 + 190214555 78407649 78407648 78407845 197 CTGTGCCTTCCTAGGGGAGGTGGTCCTTCTAGTGAATATGCCTGCAGACAGCCCTGCAGATGAAGGGCAGCACCTGCCTGATGGGAGGACAGCTACCCCCACCAGCACCTTCACCCAGCAGGACATCAATGAAGGCATCGTATGGTACAGGCACTCAGGAGCCCCAGCCCAGAGCGACTCCTTCCGCTTCGAGGTAC chr4 - 94230402 58283697 58283696 58283893 35946510 35946509 35946706 197 CTTTGCTTTCCCAGGTGAAGTGGTGCTTCTGGTCCCAATGCCGGCAGATGGCCCAGCAGAGTCATGGCAGCTTTTGCCTGATGGAAGAGCGGCCTCACCTACAACCTCTTTTACCCAGCAGGACATCAATAATGGCATCGTGTGGTACAGGCACTCTGGAACTCAAGTAGAGAGTGACTCCTTCCAGTTCCAGGTAC ..x...:....:...x..:.....x.....:..xxxx.....x.....::....x.....xxx.x......x::..........:..::.:..:x.x..:..x.x.x.:..:..................:.x........:..............x...:.:.x..:xx....:..........:x...x...... 197M 148/197 75.1% 197/94230402 0.0% 0/197 0.0% 20123952 NA +3024 chr4 + 190214555 78410396 78410395 78410451 56 AAAAAAATAAAAAATAAAAATAAATAAATAAAAAATAAAATAACAAAAAATAATGA chr4 - 94230402 7109886 7109885 7109941 87120462 87120461 87120517 56 AAAAAAATAATAATCAAAGACTAATCAATAGAAAATAGAATTAAAAAAAATCATGA ..........x..x:...:.:x...x....:......:...x.x.......x.... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 71300510 NA +6091 chr4 + 190214555 78412954 78412953 78413091 138 TGACTTTCTTTT--CAGGTGTCCAGTGCCTCCAATGCCCAGACCCGCCTGGAGAGCCACATGTTCAACATCGCGATCTTACCACAGACACCTGAAGCACCTAAAGTGTCTCTGGAAGCATCTCTCCATATGACTGTGAGT chr4 - 94230402 58285805 58285804 58285944 35944459 35944458 35944598 140 TGATCTTCGTTTTGCAGGTGTCCAGCTCTGCCAGTCCACAAGCCAGCTTGGAAAGCCACGTGTTCAACGTTGCTGTGCTCCCACAGACACCCAGAGCACCTCAGCTTTCCCTTGGCTCCTCTTTGCACATGGCTGTAAGT ...::...x...--...........:x.:x...:.x.x..::..x..:....:......:........:.:..x:.x:.x...........:::.......x.:x.x..:..x.:xx.x...:.x..:...:....:... 12M2I126M 97/138 70.3% 140/94230402 0.0% 2/138 1.4% 20127149 NA +5237 chr4 + 190214555 78418864 78418863 78419068 205 TTTTTTTTCTTAATAAGGTCTGTTTTTGCCTCTGGC--TTTTGTTTTTCATACCATGT-------GTTCCTCTTCCTTCTTAAAC---TTTGTTTAGGCTAGAGAAGATGGCCTGACTGTTATTCAGCCTCATTCCCTCTCCTTCATAAACTCTGAGAAGCCAAGTGGAAAGATTGTCTACAACATCACTCTACCTCTGCATCCAAATCAAGGTAAG chr4 - 94230402 58289102 58289101 58289318 35941085 35941084 35941301 217 TTATCTTTTATAGCAAAGCAAATTCTCTCTTGTTGTATTTCTGTCTGTCTTTCCATGTCTCTGGTGTTGATGCTCTTGCTCTAATGTGTTTATTGAGGTGCTGGAGGACCGCGTGACAGTGATTGAGCCCCATCACCTCTCCTTTGTAGACCCAGAGATTCCCAGTGAGAAAATCCTGTTCAACGTGACTGTCCCTCTGCTTCCTGGCCAAGGCAAG ..x.:...:x..::..:.:xx:..:.:x.:.x.x.:--..:...:.x..x.x......-------...xx.x:..:.x..:x..:---...:..x...:xxx:..:..:x..x....x..x...x....:...:x.........::..:..:.x....xx..x....::..:..:x.x.x....:.x...x.x.......x...x:::.....:... 36M2I20M7I20M3I129M 131/205 63.9% 217/94230402 0.0% 12/205 5.9% 20129762 NA +3048 chr4 + 190214555 78424375 78424374 78424424 50 CTTACTCTTTT------AGGTCTCCCAGAATCAGTGAAATTCCACTTCACAGGTAA chr4 - 94230402 58290674 58290673 58290729 35939674 35939673 35939729 56 CTTACTGTATTTATCCCAGGTCTCCCAGAGTCAGTGAACTTCCGATTCACAGGTAA ......x.x..------............:........x....:x........... 11M6I39M 44/50 88.0% 56/94230402 0.0% 6/50 12.0% 20133701 NA +6619 chr4 + 190214555 78429038 78429037 78429231 194 GCGTGTCTCTGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGCATTTATCCTTTTTAGTTTCAGATGGAGAACACACAAGTCCGGAGATGGTCCTCACCATTCACTTACTTCCCAGTGATCAGCAACTGCCAGTGTTCCAGGTCACAGCTCCACGGCTGGCGGTCAGCCCAGGAGGCAGCACTTCTGTAGGTAAG chr4 - 94230402 58291392 58291391 58291569 35938834 35938833 35939011 178 GCACATCCCTATGCTCAGTTGT-TGTTTTTGTCTGTGT---------------CTAGTGTCTGGTGGAGAACACACAACCCCGGAGATGGCGTTTGTCATTCACTTGCTCTCTGCAGAGCAGCAGCCTCCAGTCTTCCAGATCACAGCTCCTTTCCTGGAGGTCAGCCAGGGGGGAAAGGCCACCATCGGTGAG ..:::..:..:..:x::xx...-...:.:...x.....---------------:....x..x.:..............x:..........:x:.:::.........:..::.::xx..x.....:.:x.....x......:..........x:xx....x........x:..:..x.:x:.:x.::.x...:.. 22M1D15M15D141M 121/178 68.0% 178/94230402 0.0% 16/178 9.0% 20137646 NA +11972 chr4 + 190214555 78432340 78432339 78432614 275 TGTTTTATTCTTGGAAGGTGACACTTTCACCTATGAGGATGTTGAGAAAAATGCTCTACAGTATATACATGATGGTTCCTCTACCCGGGAAGACAGCATGGAGATCTCAGTCACAGATGGCCT---CACAGTGACAATGCTGGAGGTGAGAGTAGAGGTGTCCCTGTCAGAAGACCGAGGGCCTCGACTGGCTGCTGGCTCCTCTCTGAGCATTACTGTTGCCAGTAAAAGCACAGCCATAATCACTAGGTCACACCTTGCTTACGTGGTAAGTTCTT chr4 - 94230402 58292874 58292873 58293148 35937255 35937254 35937529 275 TATTTCTTCCTGGGAAGGTGACACCTTCACCTATGAGGACGTCACTCGAAATGCTCTGCAGTACGTACATGATGGCTCATCGGCAGCAGAAGACAGCATGGAAATCTCTGTCACCGATGGCGTCACCACAGTGACCA---CAGTGCTGAGAGTGGAGGTGTCCCTACTGGATAACAACGGCCCACAGCTGGCCCCAGGCTGCCTGTTGGCAATCACTGTGGCTAGTAAAAGCTCTGCAACTCTCTCTCGACTGCACCTCGCTTACATTGTAAGCTTTT .:...:x.:..x............:..............:..::xxx:.........:.....::..........:..x..x:.xxx:..............:.....x.....x......x.---.........x.---::.x.x.......:...........::::..x:..x:x..x..x.::.....:x.x....x.::x:..:xx..:.....x..:.........x.x..x.:xx..x..x.::::.....:......:.x.....:.:.. 123M3I11M3D138M 194/272 71.3% 275/94230402 0.0% 6/272 2.2% 20139466 NA +8761 chr4 + 190214555 78438566 78438565 78439068 503 TTAGGATGATTCTTCCCCCGACCCAGAGATCTGGATTCAGTTAAATTATCTGCCCTCATATGGTACTCTCTTAAGAATCTCAGGATCTGAGGTGGAAGAGCTCTCAGAAGTTTCCAATTTCACAATGGAAGACATCAATAACAAGAAAATCAGGTACATAATCACT---------------------------------------------------------TTGTATTA-------------------------------TTTGACA-----GATTCTTAAAAACTTGTATGAAAATATTTC------------------------------------AGCAACTGGTTGTAGCTCTG------------------------------------------------------------------TTGAAAGAATATA---------TTGGTTTGG--------------CCCCATTTTTAAACAAAGATGCT-------GCTGTCTTACCTGGCTTGTCATCGTGGCTTATTCATTTGATTCTTTTTGTTTTT----TTATAGATACTCAGCTGTGTTTGAAACTGATGGTCATCTGGTTACTGATAGCTTCTATTTCTCTGTCTCTGACATGGACCACAACCATCTGGATAATCAGATATTTACCATCATGATCACTCCTGCTGAAAATCCACCTCCAGTCATTGCTTTTGCTGACCTTATCACGGTAA chr4 - 94230402 58294587 58294586 58295312 35935091 35935090 35935816 726 TTAGGACAACAATTCTCCTGACTCAGAGATAAGAATCCAGTTAATATCTCTGCCCACGTACGGCACCCTCTTACGGACGTCTGGCTCTCATGCTGAAGAACTTTCTAGGGTTTATAATTTCACCATGGAAGACATCAACAACCAGAGGATCAGGTATCAAATGGCTGTTCTCCTAAGCCATGCTAGTTAAAAGCTCAGTGGGCTTTCCACAGGGAACTCAGGACTGTATTAGGATGGTGAAACGTATCCAAGATAGTGTTTTCTTGGCAATTGTAACCTGTGAGATTATAAATGAGAGCATTTTCTGTGTACAGAATTAGGTGTTTACGCAGATCTGAAAGGTAGTTGGTTGAAATTATGAGAATTTTTTTCTGTGCAATGTCATGGTGATACTTCAGGTAGGCAGCATAAAAAAAAAAAAGTGATTTCAAAGAGTTCAGGAATTGACTGGGGTTGGGAACTGAAATACCACTTCTCTTCCAAGCAGTG-TGCTTGGATGAGGTGTTTTAACCCAACTGTCAGCGAGACTC-----CCTGACACAGCTTGTGTTTTGACTTGCAGTTACTCCACTGTGTTTGAGACAAGCAATCAGCCAGTTACGGATGCCTTTCACTTCACTGTTTTTGATGCTGATAATAACCGGCTTGACAGACAGATGTTTACCATCACCATCACGTCTGCCCAGACAGCACCATCACTCATTGTGTTTGCTGACCATATCGCTGTAA ......::.:xx...:..:...:.......xx.:..:.......xx.x.......x.:..:..:..:......x.:.:x..x..x...x.x.:x.....:..:..x:::....x:........x..............:...x...::........:xx...x:..---------------------------------------------------------:.......-------------------------------:...:..-----:.:::x.:.:.x:x.:x....:.::....:------------------------------------:.:.::......x.::.x..------------------------------------------------------------------..x.....:.x:.---------.x..x....--------------.::.x:..::..:..:x.-....-------.x...:...x.:x:x:.....x..x.:..:-----::...:x.xx:....x...----..::..x.....x:..........:..x:::::...x.::.....x...:x...::.:...x....:.:...:::x..:x.:....:x..x..:.:x.....:..........:x.....x:....:x.:.xxx....x:..x......:x..........x....:.x.... 166M57I8M31I7M5I30M36I20M66I13M9I9M14I18M1D4M7I30M5D19M4I173M 331/497 66.6% 726/94230402 0.0% 235/497 47.3% 20143979 NA +10923 chr4 + 190214555 78445517 78445516 78445715 199 TGCAGGTGATCGTTTTGGCCCTGAAACTGCCAGTGACC-TAGAGGCATCATTTCCTATTCAAGACGTCCTGGAAAACTACATTTACTACTTTCAGAGTGTTCATGAAAGCATTGAGCCAACCCATGATATTTTTAGTTTTTATGTGAGTGATGGAACCAGTCGTTCAGAAATTCACAGCATCAATATCACCATTGAGGTA chr4 - 94230402 58297215 58297214 58297413 35932990 35932989 35933188 199 TGCAGGTGAGACTTTTGGACCACAGAGTGCT-GTGACCACAGATGCATCCTTCTCCATTCAAGATGTTCTAGAGAACAACATTTACTACTTTCAGAGCGTCCATGAAAGCATCGAGCCAACAAGTGATGTTTTCAGCTTTTACGTGAGCGATGGCTTCAGCCAGTCTGAGGTGCACAGCATCAACATCACCATTCAGGTA .........xxx......x..xx.:.x...:-......-:...x.....x..::.:........:..:..:..:...x...................:..:...........:........xx:....:....:..:.....:.....:.....xx:...:.:x..x..::.x...........:.........x..... 31M1D6M1I161M 155/198 78.3% 199/94230402 0.0% 2/198 1.0% 20148302 NA +6646 chr4 + 190214555 78446724 78446723 78446891 168 CAGAGGAAGAACGATGAGCCTCCCAGGATGACCTTGCAGCCCCTCAGAGTGCAGCTGAGCTCGGGAGTGGTGATAAGCAATTCTTCTTTGAGCCTGCAAGACCTGGACACCCCAGATAATGAGCTCATTTTTGTATTGACAAAAAAGCCTGACCACGGTAGGGCACGA chr4 - 94230402 58297793 58297792 58297957 35932446 35932445 35932610 165 CAGCGACGGAATGATGAGCCCCCAAAGATGGTGTTGGAGCCTGTCAGAGTGCATGAGAGCTC---AGTGGTTGTTACCAGTGCCTCACTCAACCTGCAGGACCTGGACACCCAGAACAGTGAGCTTGTCATCATGGTTACCAAAACTCCTGAGCACGGTAAGTCCTGA ...x.:x:...:........:..x.:....::x...x....:x..........xxx......---......x:.x.x..:.x.:..x:.x.:......:.............x::.:.:......::.:x.::.:x.x..x....xx.....x.......:.x.x:.. 62M3D103M 114/165 69.1% 165/94230402 0.0% 3/165 1.8% 20148931 NA +8455 chr4 + 190214555 78448049 78448048 78448341 293 TCAGGTCATGTACTCTGGAGGCAAACTGCTTCTGAGCCTCTGGAGAATGGGAGAGTTTTAGTCCAGGGCTCAACCTTCACCTACCAGGATATCCTAGCTGGGCTGGTTGGGTATGTGCCTAGTGTCCCTG--GCATGGTCGTGGATGAGTTCCAGTTCTCCCTCACTGATGGCCTCCACGTGGACACAGGGAGGATGAAGATCTACACAGAACTGCCTGCAAGTGACACACCTCACTTGGCTATAAACCAAGGCCTACAGCTCTCAGCAGGTACCACAGAAATAAAGGAGAGTGG chr4 - 94230402 58298403 58298402 58298689 35931714 35931713 35932000 287 TCAGGTCACCTTCGCAGGAGGCAGACTGCTGTGGAGCCCCCAGAGCGTGGACACGTGCTGTCTCTGGGCTCATCCTTCACCTACCAGGACATTTTGGATGAGCTGATTGTTTATTCTCAAAGCGGTGCAGCAGCACAGAC--GGATGAGTTTGGCTTCTCCATCACAGATGGTCTCTACATGCAGACAGGGAAGCTGGAGTTCTCCATGGAGCTTCCAAAGAAGCAGCTGCCCACATTGACTGCCAGCAGGGTCCTGCAGCTCCCCACTGGTATGGGAGGA------GAGGGTGG ........:x.x.x.x.......:......x:x.....:.::...x:...:x:x..x:.:x::.x.......x................:..::.:.x..:....:...xx...x:x.xx..:.x:x.x.--...::.x.--.........:x:x......x....x.....:...:..:..x.x.......:.x..:..x...x..::..:..x..x:x:.:xx.xx::..:xxx...:..::x.:.x::.x...:......:.x:.x....:x:x..:.------...:.... 130M2I8M2D139M6D8M 182/285 63.9% 287/94230402 0.0% 10/285 3.5% 20149646 NA +7665 chr4 + 190214555 78450131 78450130 78450344 214 CTCTTCCGTTCTCTT-CCAAGGGTCTGTAGCACGCATCACAGAACAGCACTTGAAAGTGACAGATATTGACTCAGATGACCATCAGGTTATGTACATCATGAAGGAAGATCCTGGTGCAGGGCGCCTGCAGATGATGAAGCATGGCAACCTGGAGCAAATTTCTATTAAAGGCCCCATCCGAAGTTTCACCCAGGCAGACATTAGCCAAGGTCAG chr4 - 94230402 58299437 58299436 58299651 35930752 35930751 35930966 215 CTTTTTCTTTCTCTGGTTCAGGCTCTGCAGCACACATCACAGATCAACACTTGAAAGCAGCAGCTGTTTATCCAGATGACACAATGATCAGATTTGTCATGAAGAGGGATCCCAGCGTGGGCCATTTGCAGTTGACTGATATTGATAATCCAGTCGAGATCTCTGTCAGAGGGCCTGTCAAAAGTTTTACCCAGGCTGATATAAATAAAGGTAAG ..:..:.x......x-::x...x....:.....:.........x..:..........:::...x.:..x.::........xxxxx.:.:.x:.x::........:::.....::.:.::..x.:::.....x...:x:.xxx..::..:.::.xxx.:..:...:.:.:...x..::..x:......:........x..:..x.::x.....x.. 15M1I199M 137/214 64.0% 215/94230402 0.0% 1/214 0.5% 20150694 NA +11787 chr4 + 190214555 78451741 78451740 78452359 619 AGCAAATCTTGATTTTTTTTCCTTTTTATAGGCCACGTAGAATATAGTCATGGAACAGGAGAACCTGGAGGGAGCTTTGCTTTTAAATTTGATGTGGTTGATGGAGAAGGCAACAGATTGATTGACAAGTCATTTTCCATCAGCATTCTAGGTAAAGAG------------ACATTT------------------------------------------------------GATTTTCTAATATAAAACTATT----------------------TTAGCAGTTC-----------------TGAGGTTATATAGTTTA-CACTTTGTTCACCTC--------------GAGGCTCGA-GTCC----------TTCCCTTTACCTAGCTGGTGTGGAAAC--TGAAAATCATACCCCCTTTATTGC--ACGAAGCCCTGGCTCCTTGGTGTGCTCTCTAACACACAGG-----------CCTAGAGATGAC---TCTGACCTTA------CTTCT----------TGGCACCAGGCCTAGAATTAAAGAAAGGAGGCTGAGAAGATCCCATTTCAAATCACTATTTC-----TGATATTTTCAGAAGACAAATCCCCACCAGTCATCACCACCAATAAAGGACTGGTCTTGGATGAAAACTCAGTGAAGAAAATCACCACCCTGCAGCTGTCTGCCACTGACCAGGACAGTGGGCCTACAGAATTGATCTACAGAATCACCAGACAGCCCCAGCTGGGCCACTTGGAACATGCAGCATCACCAGGTAAG chr4 - 94230402 58299908 58299907 58300692 35929711 35929710 35930495 785 AGCACCTCTTTTCTCCTTTCCCTTTCTCCAGGGCAAGTGGTTTATAGTCACAAGAAGGGGGATCCTGGTGGAAATTTTGCCTTCACCTTTGATGTGATCGATGCAGATGGCAGCAGACTGATGGACCAGTTTTTTCATATCACTGTATTAGGTAAACAGTAGTCTAAAGTTACATTTTCATTGCTGCAAAGCTTTATAGATGCCATTCCACACGTACAGCAAATTAAGATGGAATTCCTGAGATGCAGCTTTTATTCTCTGTCATTTCAAACGCCTTTGAAGTTTGGGGCATGAGGAGAGTTTGTGGCTGTAAAGATTAGTTCTTTGACAAACTCCTGAAAAAGACACAAAGGCATAATGTCCCTGTAATGTCTTCATTCTGTCTAGATTGTCTTCAAGACATTACATTGCTGTCCCCTCTGTTAATGACAAGTCCCAGAATACTCATTTTGAAAT-TATCACTCTGGGAGGGTTCCCTTCTGAGGATGGCCTGTGTGACTATATGCTGTCTTCTGCTTGTGAGCTAGTACCCAG--TGGGAATAACGCCAAG-GAATGGAAAGAGACCATCTCCTAACTCTGCTTTGTATTTAACCCTTGCAGAAGACAGGTTCCCCCCCTCCATCGTCGCTAACACAGGGCTGGTCTTAGATGAGAACTCTGCAAAGAAGATCACAACACTGCAGCTCTCTGCCACTGACCGGGACAGTGAGCCGACCCAGCTCCAGTACAAGCTCACCAAGCAGCCACAGCTGGGGCACCTGGAGCATGTGGCCTCCCCAGGTTAG ....xx....xx:.::...:.....:.x:...x..x..:.xx........::::.x:..:..x.....x..:.::.....:..:.xx.........:.:....x...x....:....:....x...x...:x...:x:....x::.x:........x..------------......------------------------------------------------------..x..:..:.x..:x.:..x..----------------------..x.x....:-----------------..x..:.:..x..x...-:x.....x:x.x...--------------:....x::.-....----------...x:.:.::....x.x..x.xx..:x--.x.x.x.xx.::.....:.:..:x--..:.:x...x.:x.x..::x.x..xxx.-..x...x.x..-----------:..:::....:.---.x....:x..------.....----------.:.:...x:.--.:.:.x...x.xx.:.-.:x..::....xx....:..xx.x.x..::..:-----.:.:x:..x.........::.:...x..xx:....::.:.:..:.x...:........:.....:.....x.::.....:.....x..x........x.............:........:...x..xx.::.xxxx....::x......::.....x........x...:....:....::..x..x......x.. 159M12I6M54I22M22I10M17I17M1I15M14I9M1I4M10I27M2I24M2I28M1D11M11I12M3I10M6I5M10I10M2D16M1D33M5I197M 412/615 67.0% 785/94230402 0.0% 174/615 28.3% 20151833 NA +6821 chr4 + 190214555 78463999 78463998 78464151 153 TTCTCTTTTCCCCTTTTTCTAGGTATCCAGATTAGTTCCTTTACTCAAGCTGATCTGACTTCACGAAATGTTCAGTATGTCCATTCTAGTGAGGCTGAGAAACATTCAGATGCCTTCAGCTTTACACTGTCTGATGGAGTCAGTGAGGTAGGT chr4 - 94230402 58302621 58302620 58302773 35927630 35927629 35927782 153 TCCCCTGTTGTTCTTTTTCTAGGGACAAAAATCAGTTCTTTCAGCCAGGCAGACTTGGCCTCTCGCAGCATCCAATACGTTCACACTAGCGACACTGAAAAGCATACGGATGCCTTCACCTTCTCTGTGTCTGATGGAACAAATGAGGTAGGT .:.:..x..x::...........x.:xx.:..:.....:..:.x:..:..x..::..:.:..x..x.:::.:..:..:..:..:x....:..x:....:..:...x.:..........x...:x.xx...........::x.:.......... 153M 104/153 68.0% 153/94230402 0.0% 0/153 0.0% 20161378 NA +9629 chr4 + 190214555 78464427 78464426 78464604 178 TTTCCTGCCATTCTAGGTGACTCAGACTTTCCATATCACTCTTCACCCTGTCGATGATTCGCTGCCCGTCGTACAGAACTTAGGAATGCGGGTGCAGGAGGGCATGAGGAAGACCATCACAGAGTTTGAGCTTAAGGCGGTGGATGCTGACACAGAGGTAAGAGCACTTCTTCCCATG chr4 - 94230402 58304207 58304206 58304384 35926019 35926018 35926196 178 TTTCCTCCTGTTCCAGGTCAGCCAGACATTTGACATCACCATAAACCCTGTGGATGATTCCTTACCTGTAGTGCAAAGCTTTGGGATGAGAGTTCAGGAAGGTGTGAGAAAAACCATCACAGAGTTTGAGCTTAAAGCAACAGATGCTGACACAAAGGTAAGACTCCTCCCTCCCCTG ......x.::...:....x.x:.....x..:x.:.....:x.xx.......x........x:.:..:..x..:..:.:...x..:...x.:..x.....:..::....:..:.......................:..::::............:........x:x..:.:....x.. 178M 132/178 74.2% 178/94230402 0.0% 0/178 0.0% 20160220 NA +14696 chr4 + 190214555 78466197 78466196 78466443 247 CTTCCGGACAGGCCGAGTCTGTCACATTCACCATCGTGCAGCCTCCACGCCATGGCACCATCGAGCGAACCAGCAATGGGCAGCATTTCCACCTCACCTCCACCTTCACCATGAAAGATATCTACCAGAACCGGGTCAGCTACAGCCATGACGGCAGTAACTCCCTCAAGGACCGGTTCACCTTCACTGTTTCTGATGGGACAAACCCCTTCTTTATCATTGAGGAAGGGGGAAAAGAGGTGAGGGG chr4 - 94230402 58304821 58304820 58305067 35925336 35925335 35925582 247 CCTTCGTGCAGGCTGAGGCAATTACATTCACAGTCGTGCAGCCCCCTCGACATGGCCTGATTGAACACACCAGCAATGGGCAGCATTACCACCAAGCCACCACCTTCACCATGGATGACATTTACCAGAACCGCATCAGCTACAGTCACGATGGAAGCAACTCACTGAAGGATCGCTTTGCTTTCACTGTGTCTGATGGGACCAATCCCTTCTTCATTATGGAGGATGGGGGGAAAAAGGTAAAGGG .:.:..x:.....:...x.x:.:........x:..........:..x..x......x:x..:..:.:x...................x.....xx:..x..............:.x..:..:...........x:..........:..:..:..x..:.....x..x.....:..x..::.:........x...........x..:........:..:..x.....x.....:...:....:.:... 247M 192/247 77.7% 247/94230402 0.0% 0/247 0.0% 20161376 NA +7757 chr4 + 190214555 78469974 78469973 78470103 130 TCAGATTATGACAGCAGCACCTCAGCCGTTCCGAGTAGACATCCTCCCGGTAGATGATGGCACGCCTAGAATTGTCACCAACCTGGGACTCCAGTGGCTGGAATACATGGATGGCAAGGTAA-GGCCTGTC chr4 - 94230402 58305332 58305331 58305462 35924941 35924940 35925071 131 TCAGGTTGTGACAGCAGCACCACAGCGCTTCAGAATGGACATCCTCCCTGTGGATGATGGGACACCCAGGGTGGTCACCAACCAGGGTTTGCAATGGCTGGAGTATGTGGATGGCAAGGTAACTGCTTGTC ....:..:.............x....xx...x..:.:...........x..:........x..:..:..::.x..........x...x:.x..:........:..::...............-x..:.... 122M1I8M 104/130 80.0% 131/94230402 0.0% 1/130 0.8% 20164642 NA +9067 chr4 + 190214555 78472114 78472113 78472337 224 GTCAGAGGGTCTTGTTCCTGCTTTATTCCCACCTCAGGAATTAAATTAAATGGGTTT----CTATTCTAGGCAACCAACCTGATCACCAAGAAGGAACTGCTGACCATGGACCCAGACACCGAGGACGCGCAGCTTGTCTATGAGATAACGACGGGCCCTAAGCATGGCTTTGTGGAGAACAAGCTGCAGCCTGGCAGAGCTGCTGCCACTTTCACCCAGGGTGGGGA chr4 - 94230402 58306579 58306578 58306799 35923604 35923603 35923824 221 GTTAAAAAGACTTGC-ACTGCTTGATCTTCA------GAGTTTAACTCCATCGGTTTGGCTTTAATCCAGGCAACCAATCTAATCACCAAGAAGGAATTACTGACAACAGATCCTGACACAGATGACAAACAGCTGATCTATGAGATAACAGATGGTCCCAGGAATGGTTATGTGGAGAACAAGCTGAAACCAGGAACAACTGTGACCATGTTTTCTCAGGGTATGGA ..:.:.::.x....:-x......x..:::..------..:..x..:.xx..x.....----:..x..:..........:..:...............:.:.....x.::..:..x.....x..x...:x:.....x:.............::xx..:..:.:.x....:.x................x.:..x..x.x.:...:x:...:x..:x.:......:x... 15M1D15M6D20M4I167M 155/217 71.4% 221/94230402 0.0% 11/217 5.1% 20165535 NA +11259 chr4 + 190214555 78473416 78473415 78473604 189 CAGTGAGTCTTTTTTCTCACAGAGGATGTGAACTTGGGGTTGATTCGTTATGTGTTGCACAAGGAGAAGATCCGTGAGATGATGGATAGTTTTCAGTTTCTGGTGAAAGACAGTAAACCCAATGTGGTCAGCGACAATGTCTTCCATATCCAGTGGTCACTCATCAGCTTTAAATATACCAGGTACAAG chr4 - 94230402 58307844 58307843 58308032 35922371 35922370 35922559 189 CATTGGATGTCTCCTCCCGCAGAGGATGTGAATCAGGGCCTCATTCGGTATGTGATGCATGAGGAGAAGGTTCAGGAGACTATGGACAGTTTTCAGTTCCTCGTGAAGGACAGCAAACCCAATGTGGTCCGTGGCAACGTCTTCCACATCCAGTGGTCTCTCCTCAGCTTTACATACAGCAGGTAAAGG ..x..::.x.:.::..:.:.............::x...x:.x.....x......x....::........:.:.:x....:x.....:...........:..x.....:.....:...............x.:.:...:........:...........x...x.........x...:.x......x.:. 189M 147/189 77.8% 189/94230402 0.0% 0/189 0.0% 20165572 NA +10502 chr4 + 190214555 78475432 78475431 78475634 203 TTCCAGCTACAATGTCAGTGAGAAGGCAGGGTCTGTCAGTGTCACGGTGCAGAGGACTGGGAACCTGAACCAATATGCCATCGTCCTGTGTCGCACCGAGCAAGGCACCGCCAGCTCCAGCTCCAGGGTCAGCTCCCAACCTGGGCAACAGGACTATGTAGAGTATGCTGGCCAGGTAGGTGGGGTAGTGGGGTTGGGGGAGG chr4 - 94230402 58308523 58308522 58308718 35921685 35921684 35921880 196 TTCCAGCTACAACGTCAGTGAGAGCGCTGGCTCTGTGAGCGTCACCGTGCGGCGGATTGGTAACCTTAACCAGTATGCCATTGTCTTGTGCCGCACGGAGCAGGGAACAGCCACTTCCAGCTC------TGGTTCACAGTCTGAAGAGCAGGACTATGTGGAGTACGCAGGGCAGGTAGGCTGGGGA-TGGGGGGAGAGGAGG ............:..........:x..x..x.....x..:.....x....:.x...:...x.....x.....:........:...:....:.....x.....:..x..x....x:........------::.:..x..::...::x.:...........:.....:..x..x........:x...x.-.....xx:.:..... 123M6D58M1D15M 152/196 77.6% 196/94230402 0.0% 7/196 3.6% 20166909 NA +15908 chr4 + 190214555 78477753 78477752 78478073 321 GGGGAAGCAGAGCAGGGGAAGCTGAGGCACAGCTT------AACTTCTTGTTGGTTCCTTTGTGACAGGTCCAGTTTGATGAGCGAGAGGACACCAAGTCCTGCACCATTGTCATCAACGATGATGACGTGTTTGAAAATGTTGAGAGTTTCACTGTGGAGCTCAGCATGCCAGCTTATGCCCTGTTAGGGGAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGGATGAACCCACATTAGAGTTTGACAAGAAGATCTACTGGGTTAACGAGAGCGCTGGTTTTCTGTTTGCACCTATTGAAAGAAAAGGTCTGTTGGTTC chr4 - 94230402 58309854 58309853 58310173 35920230 35920229 35920549 320 GGGTAAGGCAGGAAGGGGAAGGAAAGTTTCAGATTCCTGCAGACCACTTGCTGCCTTC-------CAGGTGCAGTTTGAGGAGCGGGAAGACACCAAGGCCTGCACCATCGTCATTAACGATGACGACATCTTTGAGAGCACCGAGAGCTTCACTGTGGAGCTCAGCATGCCAGCCTATGCTCTGCTGGGGAATGTCACCCATGCCACAGTCACCATCACAGACGCTGAGGATGAGCCCATGCTGCAGTTCGACAGGAAGACGTACCACGTCAGTGAGAGCGCTGGGTTTCTCTCTGCGCCTGTTGAAAGGAAAGGTGGGTTGAATC ...x...xx::.x........xx:..x:x...x..------:..:x....:..x:.:.-------.....x........x.....:..:.........x..........:.....:........:...:.x.....:.:::::.....:..........................:.....:...:.:...:.xx.......x..x.x:....::....xx..::.:........:....:::.:x....:....:.....:x...::x..:.::...........x.....x.:...:...:.......:......xx....:x.. 35M6I17M7D262M 233/314 74.2% 320/94230402 0.0% 13/314 4.1% 20167899 NA +20995 chr4 + 190214555 78479353 78479352 78479731 379 TTTTTGCCATTTGTATTTCAGGAGATGCAAGCAGCATTGTATCTGCAATTTGCTACACAGTCCCTAAGTCAGCTATGGGAAGTAGCCTCTATGCTCTAGAATCAGGCTCTGATTTTAAATCTAGAGGGATGTCTGCCGCGAGTCGTGTGATATTCGGGCCTGGTGTGACCATGTCCACCTGTGATGTCATGCTTATTGATGACAGCGAGTATGAAGAGGAAGAAGAGTTTGAGATTGCCTTGGCAGATGCCTCTGACAATGCCCGCATTGGAAGGGTGGCGACAGCCAAGGTGCTCATTAGTGGTCCCAACGATGCCTCGACTGTGTCCCTGGGCAACACGGCTTTCACTGTCAGTGAGGACGCAGGTAATGGAGAGTG chr4 - 94230402 58310717 58310716 58311092 35919311 35919310 35919686 376 TTTTTTTCTGTTGCATTTTAGGAGATGCTAGCAGCACTGTGTCTGCTGTCTGCTACACTGTCCCCAAATCAGCCAAGGGAAGCAGCCTTTATATGCTGGAGTCTGGCTCCGACTTCAAGTCCCGAGGGATGACAGATGACAGCCGCATAGTTTTTGGACCAGGTGTTACCATGTCGACATGTGATGTCATGCTTATTGATGACAGTGAATATGAAGAAGAAGAGGAGTTTGAGATAGTATTGGCTGATGCTTCGGAAAATGCACGCATTGGCAACCGGGCTTCAGCCAGCGTCTTCATCGGTGGTCCCAATGATGCCTCGACAGTGTTCCTGGGAAATGCCACGTTCACCGTCAGTGAGGCTGCAGG---TGAAGAGTG .....x:.xx...:....:.........x.......:...:.....x:.:........x.....:..:.....:.x......:.....:...::x..:..:..x.....:..:..:..:..:x........x.x.x:.xx..:..::.::.x..:..:..x.....x........x..x..........................:..:........:.....:...........x.:x.....x.....:..x..x.....x........x.:xxx...xx......:x..x:....::..........:...........x....:......x..::.x:.x.....:..........x:.....---..:...... 367M3D9M 289/376 76.9% 376/94230402 0.0% 3/376 0.8% 20168636 NA +12674 chr4 + 190214555 78481793 78481792 78482540 748 TCTTAATTCAGGCACAGTAAAGATTCCAGTTATCCGCCATGGTACTGACCTCTCTACTTTCGCATCTGTCTGGTGTGCAACGCGGCCCTCAGACCCAGCTTCTGCCACACCAGGAGTTGACTACGTTCCCAGCTCTCGGAAGGTGGAATTTGGGCCTGGTGTCATTGAACAGGTGCGTTTACAGCAGTCGAGACTCCACAAAGTTGACAGGT-----CGGTTTGTGAATG----TTGTCTTTAGTTTGCTTCCCAAGCTCTCTAAACTCCCCTGGCGATATTCCTATCTTTCCTTTCTTTAAAAACACACATACATAAACAAGAGAGTTAACTTAGGAGGGGATCTTCTAAA-AACTCTCCTAGTGACATTTTTAGCATCAAATATCCAGCCTTACAGATTCAGGATATAA----ACTATACTCATTTGATATAAA-----------------CATCTAAAAACAAACTCCGAGTGGCATGTAATAAAGAGATCATCAT-GTTATGGATTAGAAAATCTTACTTTAAAACCACCAAAGACAGGCAAGTTGTGACCTTTGCCCTAGTCAAGGTAAATGGGTGTTAGA-----TGGTGGGTCC---TCTGTCAAGTTTG--CTTTGGTTTCTCTTCTAGTATTGCACCTTGACTATCTTGGATGACACTCAGTATCCGGTAATTGAAGGACTGGAGACATTTGTGGTTTTCCTCAGCTCAGCACAAGGAGCCGAACTGACCAAACCCTTCCAGGCAGTCATTGCAATTAATGACACATTCCAAGATGGTAAG chr4 - 94230402 58311328 58311327 58312038 35918365 35918364 35919075 711 TCGTTATACAGGAAACATTGAAATTCCAGTCCTCCGTCACGGACCTGATCTTTCAACCCCCACCTCAGTGTGGTGTGCTACTCGGACATCAGATCCTCCATCTGCCAGCCCAGGAGTTGATTATGTCCCCAGCTCCAGAAAAATAGAGTTCAGGCCAGGCAAGACAGAAGAGGTGAGG----AGCCACTTAGTCTCC-------TGATGAGTGTGCTCTGTCTGAGGACGCTTCTTCTCTCTCATGTATGTCC---ACTCTGTAT---------------TTGCCATTTGACCATTCTGAAAATCCTC--------------TGGAGGCCACCTGAGAA------TTGTAAATGAAACTGCTATGCAGATTCC---CATCAGAT---TAGCCCTCCAGCTAGAAAAGATAGTCAGACCAC-CTCTTCTAGGATAAAGGTTGTCTGTTGCCTTTTCTCTGAACTGATATGCCCAGTT--------TATCTAGAACATTGTTGCCATTGATTAGCAA------CGTTAGAA-----AAAGCTTGACATGATTTCAGCTTTAGGC-AGCCAA---AAACAAGTGCCAGAAAGGATGACGGCTTCACATTTTTAAAAGTGGGACTTCTGCTTTTGTTCTAGTTCTGCACTCTGACAATCCTGGATGATGCTCAGTACCCAGTGATAGAAGGGCTGGAGACATTTGTTGTTTATCTCAGCTCACCCCATGGAGCTGAGCTGATAAAGCCCTTCCAAGCCATTGTGGCCATTAATGACATCATCCAAGATGGTAAG ..x.x..x....x.xx:.x:.:........:x....:..:..xx....:..:..x..:::.:.x..x..x........x..x...x.x.....:..xx.x.......xx...........:..:..:........:x.:..::.:..:..::....x..::xx.:x...x.....x.x----...x:::x..x....-------...:::..-----.x..:..x.:.:.----..x...:.x:.x.::x...---:....x..x---------------..x.:..:.xx..x....xx...xx.x.--------------x:...x:x..:.::..:------..x....-:.xx..x...xxx.x...::---.....:..---:....:.x...x.xx.::.x...:----..:.:-...x.:.::x.....-----------------:x...:..xxx.x.:x..x...x--------..xxx...x...::.-.::..x......x..------.x...:..-----....x:x.:..x.x.x.x.x....:xx.-..:...---...:::...::...-----..::..x.:.---.:.x.x..:x.x.--...:x.:..:.x.......x:.....::....x...:.......::.......:..:..:..x.....:..............x....x:.........x.x..x.....:..:....:x..:........:..x:.::.x..x..........:xx.............. 178M4D15M7D8M5I13M4I19M3D9M15D28M14D17M6D7M1I20M3D8M3D24M4I5M1D15M17I23M8D15M1I15M6D8M5D28M1D6M3D14M5I10M3I13M2I171M 447/669 66.8% 711/94230402 0.0% 121/669 18.1% 20170465 NA +3003 chr4 + 190214555 78486811 78486810 78486846 36 TTTCTCTTTCTCTCTCTCTATTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .......:...........x................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 59556899 NA +11745 chr4 + 190214555 78488854 78488853 78489089 236 TCTTTCTGTCTGCCCACC-TAGTGCCCAGCATGCAGTTTGCCAAGGATTTGCTCCTAGTGAAGGAGAAGGAGGGTGTCCTGCATGTCCCTATCACTCGGAGCGGAGACCTGAGCTATGAGTCATCAGTGAGGTGCTATACTCAGAGCCATTCCGCTCAGGTCATGGAGGACTTTGAGGAGAGACAAAATGCAGACTCTTCACGGATTACATTTCTCAAAGGGGACAAAGTAAGTGGA chr4 - 94230402 58312946 58312945 58313182 35917221 35917220 35917457 237 TCTTTTTTTTTGCTTCCTGCAGTACCAACCATGCAGTTCACCAAGGATGTGTTCACAGTGAAGGAAAAGGAGGGTGCACTACACATCCCCATTTTCCGCACTGGCGACCTGAGCTATGAGTCCTCCGTGAGGTGCTACACCCAGAGCCAGACAGCAGAAGTCATGGAGGACTTTGCAGAGAGGAGAAATGCAGACGAGTCCCGCATCACTTTCTTGAAAGGGGAGAAGGTGAGCTGA .....:.x.:...::x.:-:...:..x.x.........::........x..:..x:.........:..........:x..:..::....:..:x::..x.x:..x.................x..x...........:..:........xx.x..xx.:................x:.....:x:..........xxx..x..x..:..x..::.x........x..:..:..:x.. 18M1I218M 174/236 73.7% 237/94230402 0.0% 1/236 0.4% 20175908 NA +10131 chr4 + 190214555 78496720 78496719 78496969 250 GAAGAAA-GATAGTTTTCTAGGAAAACCAAGCAAATCACTGATATCTTGCTGAAAATTTTAATCTGTCTTGTGCCATTGGCTCTAGGTGAAGAACTGTACGGTCTATATCCACGATGACTCCATGTTTGAGCCAGAGGAACAGTTCAGGGTCTACCTCGGCCTTCCTCTTGGAAACCACTGGAGTGGAGCTAGAATTGGAAAGAATAACATGGCCACCATCACCATATCCAATGATGAAGATGGTAACAGA chr4 - 94230402 58313569 58313568 58313809 35916594 35916593 35916834 241 GAGGAAACGGTAATCTTCCAGTGGCTTCCAGGAATTTATCAATGTCTT----------CTATTATCTCCTCTTCACTTGGCTTTAGGTGAAAAACTGCAGTGTTTACGTCAGTGATGACTCTGCCTTTGAACCAGAGGAGCAGTTTCATGTCCATCTTGGTAGTCCGCTTGGAAACCATTGGAGTGGAGCTAGGATTGGGAAGATAGACATGGCAACTGTGACCATCACTAATGATGAAGACGGTAAGAGA ..:....-.:..:.:...:..x::xx:.x..x..x.:.:::..:....----------:..x.x.x..:.x.x.xx......:........:.....:.xx..:..::..x::........:::x.....:........:.....:x:x...:.:..:..:xx...x...........:..............:.....:....xx:.......x..::.x.....xx.:...........:.....x... 7M1I40M10D193M 169/240 70.4% 241/94230402 0.0% 11/240 4.6% 20183151 NA +12709 chr4 + 190214555 78499710 78499709 78499925 216 TATTTCCTTA--GCCCCCACCATTGAGTTTGAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGATGCCATTGCGATTCTGAACATCAAGGTGATCCGCAGAGGGGATCAGAACAGGACCTCCAAGGTTCGCTGCAGCACGCGGGATGGCTCTGCCCAGTCTGGTGTGGATTATTACCCAAAGAGCCGAGTCTTGAAGTTCAGTCCCGGTAA chr4 - 94230402 58314524 58314523 58314741 35915662 35915661 35915879 218 TGTTTCTTTATAGCACCCACCATTGAGTTTGAAGAAGCTGCGTACCAGGTACGGGAGCCACCTGGACCAGAGGGTGTCGCTGCTTTAAATATCAAAGTGGTCCGGAGAGGGGATCAGAACAGGACCTCAAAAGTGCGCTGTAGCACTCGTGATGGCTCAGCTCAGGCCGGAGTGGATTACTACCCCAAGAGTCGAGTGCTCAAATTCAGCCCAGGTAA .:....:...--..x..........................:.....:..x.....:..xx.x..x.....x.x::.:..x::.:.:..:.....:...:....x.......................x..:..x.....:.....x..x........x..:...x.:..x........:.....x.....:.....x:.x..:.....:..x..... 10M2I206M 171/216 79.2% 218/94230402 0.0% 2/216 0.9% 20185186 NA +16024 chr4 + 190214555 78507090 78507089 78507631 542 AGCAAAAAAACTCATAACCAGGGTGAAGTGTATTTTGGATCGTAGATTTTTATTACTGCCAGCCAGTGTCAGGCAGGGGCCATTAATCCTCATATGGTGTTGAACAGTAAATCTG---------CAATACTGAGCCTCTACCACAGGTGGAATTTGGTCTGTAAAAAAGATTCCTCACTTGAGATGGGGCTAAAGTGATTAGCAGCCACTGCGTTTATAGAACACCACTAAAAAGAAAGAACATATTTTAACATAATGTCTCAGCAGT---------GCCAAGCTGCACTCTCTTGGGTGTGTTTCCTAATGAAGCCTTTG--------------------CTCTCTTTTTGTTCTGTCCTTG---GCGAAGGTGTGGATCATATCTTTTTTAAAGTTGAGATCCTGTCCAATGAAGACCGGGAATGGCATGAATCTTTCTCACTAGTCCTTGGCCCAGATGACCCAGTGGAAGCAGTTCTTGGGGATGTGACTACTGCCACGGTGACAATTCTAGACCAGGAGGCAGCAGGGAGCCTCATATTGCCAGCACCACCCATTGTGAGTTGCTTGACCCAAAGGAT chr4 - 94230402 58315762 58315761 58316318 35914085 35914084 35914641 557 AGTAGAGATGCTCACTGCAGAGGTGGGATATTCTTCGGATCATAGACTTTTACTACAGACAGCTAACATAAGACAGGCATTATTAATCCTTAGATGGCATCTGCTAGTAAATTTATCACTTGATCAAT-CAGATCAGTTGTCATAGTTAGAGTTTTATGTATAAA-----TTCCTGTGTGGAAA--GGGCTAAATT-ATTAGTAGCAA-TGAGTGGAAATAAAATTTATAATGTG--------TATTTTATCATTGTATTTCAGTGGCCACGGCATAGATCAGCTCTGCTTTCTT--------TTTTTTATGAGAGCTTCAGAGCAATATCCAGTGATGAATTCTCTGTTTCTCTTGCATTTACTCTCATAGGTGTGGACCACATCATGTTTAAGGTGGAGATTATGTCCAACGAAGATCGGGAGTGGCACGAGTCCTTTTCTCTGGTGCTGGGTCCAGATGACCCAGTGGAAGCTGTTCTTGGAGACACCAGCACTGCAACAGTGACTATTTTGGATCAGGAGGCAGCAGGCAGCCTGATTCTGCCAGCACCTCCTGTGGTGAGTTGCCCATCGCAATGAAT ..:.:.:.x:....:x:.x::....:::.:.x:..:.....:....:.....:...x.x....:.:::.x..:....x:::.........:.x....::.:x:x:.......:.:---------....-.x..x.xx:.::..:..x.:..:...x:.x.:....-----.....xxx.x..:.--........x.-.....:...x.-..x..xx.x.x..x.::xx...x:x.--------.......x...x:.:.:....::.:---------.x:x....x::..:....--------..::.x....::x...::--------------------:.....x...x.::..:x:..:---x.:x.........:..:...x.x.....:..x.....:x.......:.....:.....:.....:..:..:..:..x..:..x..x..:....................x........:..:::x.x:.....x..:.....x...:.:..:..............x.....x..x:..........x..::.x.........:::x.x...x.:.. 115M9I4M1D36M5D14M2D10M1D11M1D26M8D25M9I18M8D18M20I22M3I217M 352/516 68.2% 557/94230402 0.0% 67/516 13.0% 20191328 NA +19261 chr4 + 190214555 78508712 78508711 78509009 298 CTTTGTTGCTCTTTCGCAGGTGGTCACACTTGCTGACTATGACCATGTGGAAGAAGTTACCAAGGAAGGAGTCAAGAAATCCCCCTCCCCAGGCTACCCACTGGTCTGTGTCACCCCCTGCGACCCTCATTTCCCCAGATACGCTGTCATGAAGGAGCGCTGCAGTGAGGCCGGCATCAACCAGACATCTGTGCAGTTCAGCTGGGAAGTGGCTGCCCCCACTGATGGCAATGGGGCCCGGTCTCCCTTTGAAACCATCACTGACAACACACCATTCACCAGTGTCAACCACATGGTA chr4 - 94230402 58316459 58316458 58316756 35913647 35913646 35913944 298 CTATCTTGCATCTGTACAGGTCGTCTCCTTGGCTGATTATGACCGTGTGGAAGAAGCGACCAAGCACGGTGCTAAGAAATCCCCTTCTCCAGGCTATCCTCTCATCTGTGTCACTCCCTGTGATCCTCACTTCCCCAAGTTCATGGTCATGAAGGAGCGCTGCAGCGAGGCCGGGATCAACCAGTCTTCCATACAGTTCAGCTGGGAAGTAGCAACCCCCACAGATGGGAATGGGGCCAGGTCGCCTTTTGAAACCATCACTGACAACACACCATTCACCAGCGTCAACCATAAGGTA ..x.x....x::.x::.....x...x.x:.x.....:.......:...........:x......x.x..x.::...........:..:........:..x..x:..........:.....:..:.....:.......::.x.::x....................:........x.........x.x..::.:.................:..x:.......x.....x.........x....x..:...................................:........:.x.... 298M 242/298 81.2% 298/94230402 0.0% 0/298 0.0% 20192253 NA +16698 chr4 + 190214555 78511257 78511256 78511508 252 TTTTTTCTTCCTGTTAGGTCCTGGACAGCATTTACTTCAGCCGGAGGTTCCATGTGCGTTGTGTGGCCAAGGCTGTGGACAAGGTGGGCCATGTGGGGACCCCCTTAAGGAGCAACATTGTTACCATTGGAACAGACAGTGCTATCTGCCACACACCAGTGGTGGCTGGGACATCCAGAGGCTTCCAGGCTCAGTCCTTCATCGCAACCTTGAAATACCTGGATGTCAAACATAAGGAGCATCCGAACAGGT chr4 - 94230402 58317672 58317671 58317922 35912481 35912480 35912731 251 TCCTTGCTCCCTGC-AGGTGCTGGACAGCATTTATTTCAGCCGGCGGTTCCACGTGCGCTGTGTGGCCAAGGCTGTGGACAAGGCTGGCCATGTGGGCACCCCCTTGAGGAGCAACGCAGTTACTATAGGGACAGACAGTGCCATTTGTCACACTCCTGTGGTCGCGGGGACAGCTCGAGGCTTCCAGGCACAGTCGTTTGTTGCCACTCTGAAGTATCTGGACGTCAAACACAAGGAGCATCCCAACAGGT .::..x..:....:-....x..............:.........x.......:.....:.........................:x...........x........:.........::x.....:..x..:...........:..:..:.....x..x.....x..x......x.:x.............x.....x..::.:..x..::....:..:.....:........:...........x....... 14M1D237M 208/251 82.9% 251/94230402 0.0% 1/251 0.4% 20193585 NA +11708 chr4 + 190214555 78513371 78513370 78513556 186 TTTCTGCCTTTTTCCCCCT---------AGAATCCACATTTCGGTGCAGATCCCACACCAGGATGGAATGCTGCCCCTTATCTCCACCATGCCGTTGCACAACTTACATTTTCTACTGTCTGAGTCCATCTACAGACACCAGCACGTCTGCTCCAATTTAGTTACCACCTATGACCTGAGAGGCATCTCAGGTGA chr4 - 94230402 58318063 58318062 58318257 35912146 35912145 35912340 195 TTTCTGCTTCTCATCCACTCTTTGTTCCAGGATCCACATCTCAGTGCAGATCCCCCACCAGGATGGAATGCTGCCACTCATCTCCACCCTGCCCCTGCACAATCTGCATTTCCTGCTCTCTGAGTCTATCTACAGACACCAGCATGTCTGCTCAAACCTGGTCACCATCAGAGACCTTAAAGGCATCTCAGGTAA .......:.:.:x:..x..---------..:........:..:...........x....................x..:.........x....x:.......::.:.....:..:..x........:.................:........x..::.:..:....:.x:x.....x.:.............:. 19M9I167M 151/186 81.2% 195/94230402 0.0% 9/186 4.8% 20195308 NA +15771 chr4 + 190214555 78515785 78515784 78516018 234 TCCCTCCCTGGCAGAGGCAGGGTTCCTGGATGATGTGGTCTATGATAGCACTGCCCTGGGGCCTGGCTACGATCGCCCCTTCCAGTTTGACCCCAGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCTGAACCTGAAGAGCTGCGTGTGGACCTTTGATGCTTATTATGACATGACTGAGCTGATTGACGTCTGTGGGGGCTCTGTAACCGCTGACTTCCAGGTAGG chr4 - 94230402 58319023 58319022 58319256 35911147 35911146 35911380 234 TCTCTTACTCCCAGAGGCAGGATTCCTTGATGAAGTGACATATGATAGCATTGTTCTCGGTCCTGGCTATGACCGCCCTTACCAGTTCGACCCCTCCGTGAGAGAGCCAAAGACAATCCAGCTGTACAAGCACCTCAATCTGAAGAGCTGCATATGGACCTTTGATGCCTATTACGACATGACTGAATTAATTGATGTCTGTGGAGGCTCTGTAACAGCTGACTTCCAGGTAAG ..:..:x..xx..........:.....x.....x...::x..........:..::..x..x........:..:.....:.x......:......xx....x.......:.....x........x.....:.....x..:............:.:..............:.....:...........::.:.....:........:...........x...............:. 234M 193/234 82.5% 234/94230402 0.0% 0/234 0.0% 20196762 NA +3209 chr4 + 190214555 78518396 78518395 78518452 57 TGTTTTAAGCTAAGTTTTTTTGTTGTGTATATATATATATATATATATATATATATA chr4 - 94230402 58870642 58870641 58870698 35359705 35359704 35359761 57 TACTTCAAGCTGGGCTTTTTTAATGTATGTATATATGTGTACATATGTTTATATATA .::..:.....::.:......:x...:.:.......:.:..:....:.x........ 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 19647754 NA +11599 chr4 + 190214555 78519324 78519323 78519490 167 TCGGCAGGTGAGGGACTCTGCCCAGTCCTTCTTGACAGTGCACGTGCCTCTATATGTGTCCTACATCTATGTGACAGCCCCCAGGGGCTGGGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCTTCTATGACACTGTTCTCTGGAGAACAGGTATGCCCA chr4 - 94230402 58321199 58321198 58321365 35909038 35909037 35909204 167 TTGACAGGTACGGGACTCTGCTCAGTCCTTCCTAACAGTCCACGTCCCCCTCTATGTGTCCTATATTTATGTGACAGCGCCGAGAGGCTGGGCTTCTCTTGAGCATCACACAGAGATGGAGTTCTCCTTTTTCTACGACACTGTTCTCTGGAGGACAGGTACGTCCA .:.:.....:x..........:.........:.:.....x.....x..:..x...........:..:...........x..x..:........:..::.x.....:.....x...........:..:..:.....:.................:.......:.:... 167M 138/167 82.6% 167/94230402 0.0% 0/167 0.0% 20198125 NA +8186 chr4 + 190214555 78521498 78521497 78521634 137 ATTTTCTCTCTGCTTTCCTGCCCAGGAATCCAGACAGACAGCGTGCTCTCTGCAAGGCTTCAGATAATAAGAATCTACATTCGAGAGGATGGCCGTCTTGTCATTGAATTCAAGACCCATGCCAAATTCAGAGGTAA chr4 - 94230402 58322038 58322037 58322174 35908229 35908228 35908365 137 ACTTTGTTCTTGCTGTACCACACAGGGATTCAGACGGACAGTGTCCTCTCAGCCCGGCTGCAGATAATCAGAATCTACATCCGTGAGGATGGCCGACTGGTTATTGAGTTCAAGACCCAGGCCAAGTTCAGAGGTGA .:...x.:::....x.x.::.x....:..:.....:.....:..x.....x..xx....x........x...........:..x...........x..x..:.....:...........x.....:.........:. 137M 108/137 78.8% 137/94230402 0.0% 0/137 0.0% 20199460 NA +10396 chr4 + 190214555 78522645 78522644 78522816 172 ATAGGACAGTTTGTGATGGAGCATCACACTCTCCCAGAAGTGAAATCTTTCGTATTGACTCCAGACCACCTAGGAGGAATTGAATTTGACTTGCAGCTATTATGGAGCGCTCAGACTTTTGATTCTCCACATCAACTCTGGAGAGCCACAAGCTCTTATAACAGGTAAATAC chr4 - 94230402 58322883 58322882 58323054 35907349 35907348 35907520 172 ACAGGGCTCTTTGTAATGGAGCACCACAGCTTGCCAGATGTGAAGTCGTCTTTGATGACTCCAGACCATCTGGGAGGGATCGAATTTGACCTGCAACTGCTGTGGAGTGCTCAGACTTTTGACTCTCCCTACCAGCTCTGGAGGGCAACCAGCTCTTATAACAGGTGAGGAC .:...:.xx.....:........:....x::.x.....x.....:..x.::x.:x.............:..:.....:..:.........:....:..::.:.....:..............:.....x:.:..:........:..x..x................:.:x.. 172M 133/172 77.3% 172/94230402 0.0% 0/172 0.0% 20199762 NA +8508 chr4 + 190214555 78526511 78526510 78526664 154 ACGATCACAGTCTGCTCTGCATGTTTCCAGGAAGGACTACTCAGGAGAGTACACCATCTACCTGATCCCTTGCACAGTGCAGCCCACACAGCCATGGGTTGACCCAGGAGAGAAGCCTTTGGCCTGCACTGCACATGCCCCAGAAAGGTAGGAA chr4 - 94230402 58323302 58323301 58323455 35906948 35906947 35907101 154 ATGATGATGGTGTCTCCTGTCTGTTCTCAGGAAGGACTACTCTGGAGAGTACACAATCCTCTTAATTCCTTGTACTGTGCAGCCTACACAGCCATGGATAGAGCCTGGAGAGAAGCCCCTGCCCTGTACAGCTCATGCTCCCGAGCGGTAAGGA .:...x.::..x.x::...:x....::...............x...........x...:x.:.:..:.....:..x........:............:.x..x..x...........::..x....:..x..x.....:..x..:x....:.:. 154M 116/154 75.3% 154/94230402 0.0% 0/154 0.0% 20203209 NA +11354 chr4 + 190214555 78534428 78534427 78534629 202 TTTGTTTCTCCTTGCATTTAGATTCCTGATACCCATTGCATTCCAGCAGACCAACCGCCCTGTGCCAGTTGTGTATTCACTTAACACTGAATTTCAGCTCTGCAATAATGAGAAGGTGTTCCTAATGGATCCCAATACATCTGATATGTCACTAGCAGAAATGGATTACAAAGGAGCCTTTTCAAAAGGT--GAGTTGCTTCCT chr4 - 94230402 58323861 58323860 58324064 35906339 35906338 35906542 204 TTCCTTTCTGTCTCAATATAGATTTTTGATCCCAATCGCCTTCCAGCAGACAAACCGCCCAGTTCCTGTTGTCTACTCCCTAAACACGGAGTTTCAGCTGTGTAACAATGAGAAGGTGTTTCTGATGGATCCCACCAAGTCCGAAATGTCTCTGGCAGAAATGGATTACAAAGGGGCTTTTTCAAAAGGTAGGATTTCTTTCCT ..:x.....x::.xx..x......::....x..x..:..x...........x........x..x..x.....x..:..x..x.....x..:........x..:..:..............:..:..........x:.x:..:..x.....x..:....................:..:............--..x..x:..... 190M2I12M 160/202 79.2% 204/94230402 0.0% 2/202 1.0% 20210567 NA +15265 chr4 + 190214555 78536977 78536976 78537207 231 ACCTTTCAATCTTTTCAGGTCAAATCCTTTATGGCCGAGTACTTTGGAATCCAGAACAAAATCTTAATTCTGCTTACAAACTCCAGCTGGAGAAAGTCTATCTTTGTACGGGCAAGGATGGTTATGTGCCTTTCTTTGATCCCACGGGGACAATCTACAATGAAGGGCCCCAGTATGGATGCATTCAGCCAAACAAACACCTAAAACACAGATTCCTGCTGTTGGTATGCT chr4 - 94230402 58324358 58324357 58324588 35905815 35905814 35906045 231 ACCTCCCAATCTCCTCAGGGCAAATCCTGTATGGCCGTGTGCTCTGGAATCCTGAACAAAACCTAAACGCTGCTTACAAACTGCAGCTGGAGAAAGTCTACCTGTGCACTGGCAAGGATGGCTACGTGCCCTTCTTTGACCCAACAGGAACTGTCTATAACGAAGGGCCTCAGTATGGCTGTATTCAACCCAACAAGCACCTGAAACACAGATTTCTCCTCTTGGTAAGTT ....::......::.....x........x........x..:..:........x........:..x..:x.............x.................:..x..:..x...........:..:.....:........:..x..:..:..x:....:..:........:........x..:.....:..x.....:.....:...........:..x..x......x.:. 231M 189/231 81.8% 231/94230402 0.0% 0/231 0.0% 20212619 NA +10109 chr4 + 190214555 78539292 78539291 78539447 156 AGGACCGCAATCAGCCAGAGGTAACTGATAAGTACTTCCATGATGTGCCTTTTGAGGCTCACTTTGCCTCTGAGTTGCCTGATTTCCATGTGGTCAGTAACATGCCAGGTGTGGATGGATTTACTCTAAAAGTAGATGCACTCTATAAGGTGAGTT chr4 - 94230402 58325775 58325774 58325930 35904473 35904472 35904628 156 AGGACCGAAACCAACCAGAAGTCACAGATAAGTATTTCCACGATGTGCCTTTTGATGCCCACTTTGCCTCTGAACTGTCTGAGTTTCACTCAGTAAGCAGCATGCCTGGTGTGGATGGATTTACTCTCAAGGTGGATGCTCTCTACAAGGTATGTT .......x..:..:.....:..x..x........:.....:..............x..:..............::..:....x..:..:x::..x..:.:......x....................x..:..:.....x.....:.....:x... 156M 126/156 80.8% 156/94230402 0.0% 0/156 0.0% 20213517 NA +27610 chr4 + 190214555 78540508 78540507 78541245 738 ATGTTCGGTTTGTCCCCCT-GCAGGTGGAAGCAGGACACCAGTGGTATCTCCAGGTCATCTACATCATTGGCCCTGACACCATCTCAGGGCCCCGGGTCCAGCGCTCTCTCACAGCTCCACTCAGA-CGCAACCGAAGGGACCTGGTAGAGCCCGATGGCCAGCTGATCCTTGATGATTCCCTCATCTATGACAATGAAGGAGACCAAGTCAAGAATGGCACCAATATGAAGTCCCTGAATCTGGAGATGCAAGAGTTGGCGGTAGCTGCGTCCCTGTCACAGACTGGGGCGTCCATTGGCAGTGCCCTGGCTGCAATCATGCTTCTACTTCTGGTGTTTTTGGTGGCTTGTTTTATCAACAGGAAATGCCAGAAACAGAGGAAGAAG---AAGCCCGCAGAGGACATTTTGGAAGAATATCCTCTGAATACCAAGGTAGAAGTGCCCAAGAGGCACCCGGACCGGGTGGAGAAGAACGTGAATAGACACTACTGCACTGTGCGGAACGTCAACATCCTGAGTGAGCCTGAGGCGGCTTACACGTTCAAAGGTGCTAAAGTCAAAAGACTGAATCTAGAAGTCAGAGTTCACAACAATTTACAAGATGGAACAGAAGTTTAATGGAGGAGACCTATGTGTATTTTTTTCTAAAATCATTT-----TTATAAAATGGGGGGAA------------------------------------------ATACTGGTATTTTTATAATCTCGCAGATAAAAAAGGGAAAACTATAGCTTTGAGTGGCAGACAGCA chr4 - 94230402 58326560 58326559 58327329 35903074 35903073 35903843 770 ATGTACGTCTTCCCTTCCTCACAGGTGGAAGCTGGACATCAGTGGTACCTTCAAGTTATCTACATAATAGGCCCAGAGAGCATTGCGGGGCCTCGTGTTCAACGATCTCTTAC-TCACCACTTAAAGCGTGGCCGCAGGGACCTGGTTGACAGTGATGGGAGGCTGATGCTGGATGACTCCTTGATCTACGACAACGAGGGCGATCAGGTCAAGAACGGCACCAACATGAAGTCGCTGATCTTGGAGATGGAGGAAGCTGTGGTCGCAGCCTCCTTATCACAGACGGGTGCTTCCCTCGGGAGTGCATTTGCTGCTGTCATGCTGCTGTTGCTGGTGCTTCTGGGAGTCTGCCTTGTCACCAGGAAGTGCAGGACGCTGCGGAGGAAGCGAGAGGCTGTCCGAGCTGCCCCAGAGGAACACCCTCTGAACACTAAGGTGGAGCTGCCCAAG-GGCAC-----------AGAGAAGGCAGTGAACAGCCAGTACTGCACCGTGAGGAACATCAATATACTGAGGGAAACAGGGGGCATCTCCAGTGTCAAAAGCAGAAAGGTGAAGCAGGTGAACTTAGAAGTTAAAGTCCACAATAATTTGCACGACGGAACAGAAGTTTAATGGAG----CACATGCTTACGTTTTGTAAAAGCTTTTTATAACTTGTAAaaagacaaaaaaaaaaacaacacagaaacaaaaaccaaaagataagtaaaaGTATGCTGGTATTTTTATACTCTCATG---AGAAAAGGAGGAGCTCTGGCTTTGTGTGATGCACAGCA ....x..x:..x:.::...-:...........x.....:........:..:..:..:........x..x.....x..x.x...:x.:.....:..x..:..:..x.....:..-x.x.....:.:.-..:::...x...........x..xxx:.....xx:......x..x.....:...:.x.....:.....:..:..x..:..:........:........:........x....x::........x.:..:x:x.:...x..x..x...:.:........x..x..x...x.:..x.....x:.x.....x:.......x..::.x......:..:...x:.::..::..:...x......:...x:..x:.x.x...:....---:..x.:.:xx::.x:::::::..:...:.:........:..:.....:..:x........-.....-----------:......:xx.....:..x..x........:...x.....:....:..x.....x..:x.x.:..xx:::.x..xxx.....:.::xx..:..x..:x::x....::.......:.:...:.....:.....:..x..:....................----.x:...:x..:x....x:x...:::x...-----..:.....x.:x:::..------------------------------------------..:..............x....:::---.:......:::.:..x.:......x...:::x...... 19M1I93M1D12M1I261M3I60M1D5M11D159M4D29M5I17M42I25M3D38M 504/718 70.2% 770/94230402 0.0% 72/718 10.0% 20213948 NA +3371 chr4 + 190214555 78550827 78550826 78550895 69 TTACGTGGTCTCGGATAAATCACTTCACTTTTCTAAGCCTCAGTTTTCTCTTCTGCAAATTGTGATAAA chr4 - 94230402 42976383 42976382 42976451 51253952 51253951 51254020 69 TTGGGTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGATAAA ..:x...:..::.x:...:.........:.:.:x.:....:x....:..:.....x...x..x...... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 35574444 NA +3673 chr4 + 190214555 78551230 78551229 78551299 70 ACCCAACGTCTCTGTATCTCAATTTCCTCATCTATAAAATGGGGATAATA----GTATCTACCTCATAGAGTTG chr4 - 94230402 66214154 66214153 66214227 28016176 28016175 28016249 74 ACTAAGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAGGTG ..:x.:.x..........x.:.....::.....:.........:......----x..:...:...x.....x.. 50M4I20M 55/70 78.6% 74/94230402 0.0% 4/70 5.7% 12337076 NA +3864 chr4 + 190214555 78571087 78571086 78571160 74 CTGCAGCCTTGACCTTCTGCGCTCAAGTGGTCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACCACACCTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x......x.:.......x.:.x.xx:x........::...........:..:....x..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 60373961 NA +3053 chr4 + 190214555 78574420 78574419 78574453 34 AAAAACAAAACAACAACAACAAAAAAACCCAACA chr4 - 94230402 47475140 47475139 47475173 46755230 46755229 46755263 34 AAAAACAAAACAACAACAACAAAAAAGCCCAACA ..........................:....... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 31099280 NA +3028 chr4 + 190214555 78637073 78637072 78637122 50 AAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAAAATTTGAGA chr4 - 94230402 30013193 30013192 30013242 64217161 64217160 64217210 50 AAAAAAAAAAAAAAGTTTGAAGTAAAAAAGAAAAAGAAAAATATTTGAAA ..............:xxx:...x..:...............x......:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 48623880 NA +3621 chr4 + 190214555 78646923 78646922 78647005 83 CTGCAGCCTCCGCCTATTGGGTTCAAGCAGTTCTCCCGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCACCCACCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:xx:x..x:..........::x...x.xx.x........:............:......--.::x.......::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 60449797 NA +3518 chr4 + 190214555 78648188 78648187 78648358 171 TCTTCTTTCTTTTCTTTTCTTTTCTTTTCCTTTCTTTTCTTTTCTGTTTCTTTTCTTTTTTCTTCTTTCTT-TCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCTCTCTCTCTC-------TTTCTTTCTTTCTTTCTTTCTTCCCTTCTT chr4 - 94230402 61964741 61964740 61964917 32265486 32265485 32265662 177 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGT-TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTC-CTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT ...:....:.:.::x....xxx..xx:.x..xx.:.x.-..:...:..x:...:...:..:.:..::...:-.....::..:..:.........x::x:x.x.x.x...::::::...xxx.....:.....x.x...-...-------:.:..:..:x.x:.:.:.x.x....::... 38M1D32M1I66M1D3M7I30M 103/169 60.9% 177/94230402 0.0% 10/169 5.9% 16683447 NA +3024 chr4 + 190214555 78648219 78648218 78648286 68 TTCTTTTCTTTTCTGTTTCTTTTCTTTTTTCTTCTTTCTTTCTCCCTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 13985549 13985548 13985616 80244787 80244786 80244854 68 TTCATGTATTTCCTTGTTCCATTTTTTTTTCTTTTTTCTTTTTCCCCCTCCCCAGTGCTTCCTGCCTT ...x.x.x...:..xx...:x..:.........:.......:....:::.::.xx.x......x.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 64662670 NA +3213 chr4 + 190214555 78651863 78651862 78651918 56 CTAGACCAAGCTTGTCCAACCCACGGCCCACAGACTGCATGTGGTCCAGGACATCT chr4 - 94230402 10959666 10959665 10959721 83270682 83270681 83270737 56 CCAGACCAAGCATGTCTAACTCACAGTCCACAGGCTGCATGCAACCTGGCACAGCT .:.........x....:...:...:.:......:.......::::.::.x...x.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 67692197 NA +3187 chr4 + 190214555 78666026 78666025 78666107 82 CTCTAATTGATACGCACACACATGCACACACACACACACACATGCATACATATGCACATACATATTAGACTTTTAAGCCTAT chr4 - 94230402 90815411 90815410 90815484 3414919 3414918 3414992 74 CTCTTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA--------TTTTCAGCCCAT ....x:.xx:...:...:..xx..::......:...x.........:.....x.....:x..--------....x....:.. 62M8D12M 55/74 74.3% 74/94230402 0.0% 8/74 10.8% -12149385 -82081017 +3015 chr4 + 190214555 78667094 78667093 78667133 40 GTGTCTGAGTGTGTGTGAGAGAGAGAGAGAGGGAGAGAGG chr4 - 94230402 18982316 18982315 18982355 75248048 75248047 75248087 40 GTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ....x..x.......................:...::... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 59684778 NA +3004 chr4 + 190214555 78682693 78682692 78682750 58 CTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGTACCTGTAAGGTCTTTGGGATTTT chr4 - 94230402 71382346 71382345 71382403 22848000 22847999 22848057 58 CTGCCTCAAAAAAAAAAAAAAAAAATCACATAAACACCCATGGGATCTTAGAGAATTT ...:.....................xx.x.x..::...::.::.:....x.:..x... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 7300347 NA +3430 chr4 + 190214555 78697551 78697550 78697610 60 CCTCCAGGTTCAAGCAATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGAGCA chr4 - 94230402 18197139 18197138 18197198 76033205 76033204 76033264 60 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .:..::........::x...x..x.x........::.............:....x.x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 60500412 NA +3144 chr4 + 190214555 78698733 78698732 78698795 63 TTTTTATTTTTGTTTTGTTGTCGTTCTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGCTGGTGG chr4 - 94230402 51318567 51318566 51318627 42911776 42911775 42911836 61 TTTTGGTTTGTTTTTTGTTTT--TTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTGG ....x:...x.x.......x.--..x............x................x:.xx... 21M2D40M 50/61 82.0% 61/94230402 0.0% 2/61 3.3% 27380166 NA +3293 chr4 + 190214555 78698740 78698739 78698788 49 TTTTGTTTTGTTGTCG--TTCTTGTTGTTGTTGTTGGTGGTGGTGGTGGTG chr4 - 94230402 51318567 51318566 51318617 42911786 42911785 42911836 51 TTTTGGTTTGTTTTTTGTTTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTG .....x......x.:x--..:.............................. 16M2I33M 44/49 89.8% 51/94230402 0.0% 2/49 4.1% 27380173 NA +3059 chr4 + 190214555 78698756 78698755 78698793 38 TTCTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGCTGGT chr4 - 94230402 51655333 51655332 51655370 42575033 42575032 42575070 38 TTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ..:...............x..............x.... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 27043423 NA +3556 chr4 + 190214555 78708687 78708686 78708753 67 TAAAAAAAAAAAATCATATATATACACACACACACACACACACACACACACACACACACATATATAT chr4 - 94230402 87372727 87372726 87372793 6857610 6857609 6857676 67 TAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...:.:........:..x.x:.x...........x.........:x:.:..::.:::..:....... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% -8664040 -85566362 +3617 chr4 + 190214555 78708688 78708687 78708824 137 AAAAAAAAAAAATCATATATATACACACACACACAC-----------ACACACACACACACACACACACATATATATACACATATATACATATATACATATATACACATATATAT------ACATATATACACACACACACACACACACATATA chr4 - 94230402 73121056 73121055 73121209 21109194 21109193 21109347 154 AGGAAAGTAGAACTGAAACTGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .::...:x.:..:::x.xx.:.....x....x.x..-----------:::..::..:.:x..:.....:...:.:.x.x:...:x:......::..:.x:..:..:x:.....:.------.:...x....:.x....x.x.......::.... 36M11I68M6I33M 86/137 62.8% 154/94230402 0.0% 17/137 12.4% 5587632 NA +3349 chr4 + 190214555 78708700 78708699 78708767 68 TCATATATATACACACACACACACACACACACACACACACACACACATATATATACACATATATACAT chr4 - 94230402 66904845 66904844 66904912 27325491 27325490 27325558 68 TCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ........:...::.........:...........:.:x:.x::x..x:.:......xx:...::... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 11803855 NA +3007 chr4 + 190214555 78708701 78708700 78708809 109 CATATATATACACACACACACACACACACACACACACACACACACATATATATACACATATATACATATATACATATATACACATATATATACATATATACACACACAC chr4 - 94230402 89016091 89016090 89016199 5214204 5214203 5214312 109 CATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ...x.::..:.........::x::.:........::..x.::..:.:.::..x.::::.:.::.x.:.:x.:.::.:.:..:x..:::.::x...:x::....x::... 109M 58/109 53.2% 109/94230402 0.0% 0/109 0.0% -10307390 -83923012 +3552 chr4 + 190214555 78708701 78708700 78708808 108 CATATATATACACACACACACACACACACACACACACACACACACATATATATACACATATATACATATATACATATATACACATATATATACATATATACACACACA chr4 - 94230402 73121106 73121105 73121213 21109190 21109189 21109297 108 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ...::....x..:.....:.:.....x.x:..::x::...:..::...x:..:..:x:.....:::x:..:.:...x....:.x:.:.x.x...:.:..::.:.x:.. 108M 64/108 59.3% 108/94230402 0.0% 0/108 0.0% 5587595 NA +3417 chr4 + 190214555 78708702 78708701 78708824 123 ATATATATACACACACACACACACACACACACACACACACACACATATATATACACATATATACATATATACATATATACACATATATATACATATATACACACACACACACACACACATATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACAC----------ACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-------CACAAACACTAACATATA .:................----------...x:x...:..:..::x:x:.x.:.....:...xx.x::..x:.x............x...x:....::-------....x....xx....... 18M10D70M7D18M 75/106 70.8% 106/94230402 0.0% 17/106 16.0% 74291353 NA +3107 chr4 + 190214555 78708711 78708710 78708777 67 CACACACACACACACACACACACACACACACACACATATATATACACATATATACATATATACATAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..:.:.:::..::.........:...........:..x..x:.x..x:.:......xx:....::.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 11803865 NA +3363 chr4 + 190214555 78708743 78708742 78708826 84 CACATATATATACACATATATACATATATACATATATACACATATATATACATATATACACACACACACACACACACATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::.:.:...::::::...x....:...x:.:....::.:::x..:..xx...:.:.............x.....x..:x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 70312956 NA +3354 chr4 + 190214555 78708745 78708744 78708828 84 CATATATATACACATATATACATATATACATATATACACATATATATACATATATACACACACACACACACACACATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.:..::::.::...x.:..:..:x..:...:::..::x..:.:xx...:...............x.....x..:x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 70312958 NA +3567 chr4 + 190214555 78708750 78708749 78708830 81 ATATACACATATATACATATATACATATATACACATATATA--TACATATATACACACACACACACACACACATATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.::::..:.:.:....x.:.::...x....:..:...:--.....xx...................x...:.x..:x... 41M2I40M 58/81 71.6% 83/94230402 0.0% 2/81 2.5% 70312962 NA +3026 chr4 + 190214555 78708773 78708772 78708859 87 CATATATACACATATATATACATATATACACACACACACACACACACATATATATATATATATATATATATATATACACACACACAC chr4 - 94230402 73121100 73121099 73121186 21109217 21109216 21109303 87 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATAC .:.:.::.::.....x:.....:.........x.x:..::x::...:.::....x:..:.::x:.....:.:x:....:.:.x.:.. 87M 52/87 59.8% 87/94230402 0.0% 0/87 0.0% 5587673 NA +3275 chr4 + 190214555 78708788 78708787 78708852 65 ATATACATATATACACACACACACACACACACATATATATATATATATATATATATATATACACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA .....::..::..........:..............x..x:.x:.x:.:....:.xx:....:.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 11803941 NA +3189 chr4 + 190214555 78708793 78708792 78708864 72 CATATATACACACACACACACACACACATATATATATATATATATATATATATATACACACACACACTTTTT chr4 - 94230402 66904846 66904845 66904917 27325486 27325485 27325557 72 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCT .......::..::.........:.....:.:.:....x..x:.x:.x:.:....:.xx..:..:..:..::. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 11803947 NA +3054 chr4 + 190214555 78708800 78708799 78708843 44 ACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372750 87372749 87372793 6857610 6857609 6857653 44 ACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...........x..........x....::...:..::....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -8663950 -85566452 +3166 chr4 + 190214555 78725337 78725336 78725408 72 GATTTCTTTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTCTTCTTTTTTTTTTTTTTGGCAGAG chr4 - 94230402 10810506 10810505 10810577 83419826 83419825 83419897 72 GACTTCCTTCTTTTTCTTTCCTTGTTTATTTCACTCTTCTATTGCTCCTTGCTTTCTTTTGCCCTGGTGCAG ..:...:................x:..x:...x:..:.:.x..x..:...x:...:....x:::...::x.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 67914831 NA +3345 chr4 + 190214555 78727948 78727947 78728002 55 GGGGGGGTTTTGTTTTTTTGTTTGTTTGTTTGTTTTTGAAATAGAGTCTTGCTCT chr4 - 94230402 65740994 65740993 65741048 28489355 28489354 28489409 55 GGGGAGATTTTGTTCTTGTGTTTGTTTTTTTTTTTTTCAAACCAAGTCTTGCTTT ....:.:.......:..x.........x...x.....x...:x:.........:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 12986954 NA +3220 chr4 + 190214555 78728043 78728042 78728125 83 CTGCAGCCCTGACCTCCCAGGCTCAATCAATCCTCCCGTTTTAGCCTCTCAAGTAGCTGGGACTACAGACCCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:......x:.x..:.::..:....x::x.:.x.xx.x:.:.....:............:.....--..x::......::.. 66M2D15M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 60530917 NA +3295 chr4 + 190214555 78731498 78731497 78731635 138 AGCCTCCTGAGTAGCTTGGACTACAGGCAC-ACCCCACCATGCTCGGCTAAGCTTTTTTTTTTTTTTTTTTTTTTGTATTTTAGTAGAGATGGGAGTTTTACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTAGT chr4 - 94230402 687891 687890 688029 93542374 93542373 93542512 139 AGCCTCCTCAACAGAACTAATTACTCCCCCGACATCTCCACTTCTGCCTAATCTTTTTTTTTTTTTTTTTCCCCTTTTAGTTTGTAGAACAAAGAGTTTATTCATTTTGTCCAGAGTTCTCCTGTTCTGCAGACCTCGT ........x.::..xx:x:.:...xxx.x.-..x:.x...:x:::.x....x..................::::.x.xxx..x.....:xx::......xx:...x..:x....::.xx..::.x...x.x.....x.. 30M1I108M 85/138 61.6% 139/94230402 0.0% 1/138 0.7% 78043607 NA +3254 chr4 + 190214555 78738004 78738003 78738094 91 AGTAGAAAGAAAAGAAAAAAAGAGGAGAGGGGAGGGGAGTGAAGAGGAGGGGAGGGGAGGAGAGGGAAGGGAACAGAAGGGAAGGGAAGGG chr4 - 94230402 39041220 39041219 39041303 55189100 55189099 55189183 84 AGTGGTGGGACCAGAGAAGGAGAAAAGTAAGG-------CAAATAATAGGTGGTGGTGGAAGAGAGAAGGGAACAGAAGGGAAGGGGAGGG ...:.x::..xx...:..::...::..x::..-------::..x.:x...x.:x..x:.:....:.....................:.... 32M7D52M 57/84 67.9% 84/94230402 0.0% 7/84 8.3% 39696784 NA +3301 chr4 + 190214555 78746121 78746120 78746189 69 AAAAAAAACAAAAGAAAAAGAAAAAAAGAAAAAGAAGAAGCTCCTTTTGCTTCACCCAAGTAAAAATAC chr4 - 94230402 19364584 19364583 19364652 74865751 74865750 74865819 69 AAAAAAAGCAAAAAAAGAAGAAACAAATAAAACCCAGCACTTCCTTTTGGTTCATTACAGCAAGAATAC .......:.....:..:......x...x....xxx..x.x:........x....::xx..:..:..... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 59381537 NA +4115 chr4 + 190214555 78774151 78774150 78774242 92 TGCCATCATAGCGCACTGCAGCCTTGAACTCCTTGGTTCAAGCGATCCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACCAC chr4 - 94230402 18197114 18197113 18197202 76033201 76033200 76033289 89 TGGCATCAT---GTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..x......---.:x..:.....:x:.:..:..x........:.x.:.x.xx.x........::::.........:.:....x......... 9M3D80M 65/89 73.0% 89/94230402 0.0% 3/89 3.4% 60577037 NA +3067 chr4 + 190214555 78808259 78808258 78808318 60 TGCTTCCTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTGTGTTGCCTAGACTGGAGT chr4 - 94230402 13036460 13036459 13036519 81193884 81193883 81193943 60 TGCTTGCTTTTTTTTTTTTTTTTTTAACAATCAGTCCCCTTGTGCTGGCTCTTCTGGGGT .....x...................:.x.x.x....:.x:....:..x..xxx....:.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 65771799 NA +3407 chr4 + 190214555 78866726 78866725 78866797 72 CTGCAACCTCCGCCTCCTGGGTTCAAGCCATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGGGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...........:xx...x.xx.x.........:...........:.:....x.x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 60669600 NA +3028 chr4 + 190214555 78873676 78873675 78873722 47 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATGCATGCATGTG chr4 - 94230402 7002321 7002320 7002367 87228036 87228035 87228082 47 GTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATG .........xx...........x.x.....:.:..x........:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 71871355 NA +3324 chr4 + 190214555 78909001 78909000 78909086 86 TTGCATTA-CTATAATTTCCTTTTGCCTGAACTCCCCTTCTTACCTTCCCTTAGTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 17623011 17623010 17623096 76607307 76607306 76607392 86 TTGTATTAACTGCAAGTCTCTTGCTCCAGA-CTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAG ...:....-..::..x.::...x:x..x..-..:..:....:.x.:::...:xx.............:.x....x........:... 8M1I21M1D56M 61/85 71.8% 86/94230402 0.0% 2/85 2.4% 61285990 NA +3055 chr4 + 190214555 78965171 78965170 78965215 45 TGGTTTTTTGTTTTTGTTTTGTTTTGTTTTTAAAAAACCATCCTT chr4 - 94230402 62233724 62233723 62233768 31996635 31996634 31996679 45 TGGTTTTTTGTTTTTTTTTTGTTTTTTTTTCAAAAAGCCTCCCCT ...............x.........x....:.....:..x:..:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 16731447 NA +3170 chr4 + 190214555 78969925 78969924 78969980 56 ATTATGTACATGTTGAATAATTTCTTTTTTCTTTTTTTTTTTTTTTTGAGACGGAG chr4 - 94230402 3834824 3834823 3834879 90395524 90395523 90395579 56 ATAATGTACTTTTGTAATAATTACTCTTTTTTTTTTTTTTTCTTTTTGAGGTGAAG ..x......x.x.xx.......x..:....:..........:........::.:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 75135101 NA +3042 chr4 + 190214555 78997606 78997605 78997673 68 GATCTCTCTCTTCTACTGTTTTCTTTTCTTTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTATGAG chr4 - 94230402 37679184 37679183 37679251 56551152 56551151 56551219 68 GATCGCTGTTTTCTATTACTTGCTCTGCTGTTTCTGTTTTGTCTTTTTTTTTTTTTTTCCCTAATCAG ....x..x.:.....:.::..x..:.x..x...::x....x.....:...........:::.x..x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 41318422 NA +3333 chr4 + 190214555 78997618 78997617 78997673 56 CTACTGTTTTCTTTTCTTTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTATGAG chr4 - 94230402 36600614 36600613 36600669 57629734 57629733 57629789 56 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGG ..x..x.....:.:...:...:.:...:.....:.....:x...:.........:. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 42397004 NA +3219 chr4 + 190214555 79029541 79029540 79029598 58 ACATTTGTAAGTACACACATGCATACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964827 14964826 14964884 79265519 79265518 79265576 58 ATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::....::x..:.....:..:..::.:.:...xx........::............. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 64064714 NA +3349 chr4 + 190214555 79084888 79084887 79084991 104 GAAAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAA----AAGGGAAGGGAAGGGAGAAAGGGA----AAGAGAGAAAGAAAGGAAAAGAAATAGGAAGCTGCACACTTGG chr4 - 94230402 44147018 44147017 44147128 50083275 50083274 50083385 111 GAGAAATAAAGAAA-AAAGACAATGGAAAATGAAGAGCCATGGGGGAAGGGCTGGGGGGAAGGGAATCTAATAAAGAAGAAAATAGCAACAAGGAGGAGGCAGTAAATTTGG ..:...x.......-.....x..x.:....x:....:----::........xx...:.:......----..x.:....::...x::x..x..:x....:..x.:.x.:.... 14M1D22M4I24M4I43M 73/103 70.9% 111/94230402 0.0% 9/103 8.7% 34937870 NA +3059 chr4 + 190214555 79138602 79138601 79138673 72 CTCCGTCCTCCCCCCCCCAAAAAAAAGAAAAAGAAAAAAGAAAAAAA-------AATAAAT---AAATGGGGCATT-CTTCTT chr4 - 94230402 59404624 59404623 59404706 34825697 34825696 34825779 83 CCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAAATATGAAATGAAGCACTGCCTCTT .:..x...:........x........:.....::.......x.x...-------..x....---.....::...:.-.:.... 47M7I7M3I12M1I6M 58/72 80.6% 83/94230402 0.0% 11/72 15.3% 19733978 NA +3204 chr4 + 190214555 79138602 79138601 79138654 53 CTCCGTCCTCCCCCCCCCAAAAAAAAGAAAAAGAAAA---AAGAAAAAAAAATAAA chr4 - 94230402 31896461 31896460 31896516 62333887 62333886 62333942 56 CCCAGCCCTCCCCCCCCCAAAAAAAAGAAAAAAGAAACTCAAAAAAAGAAACTGAA .:.x.:..........................::...---..:....:...x.:.. 37M3I16M 44/53 83.0% 56/94230402 0.0% 3/53 5.7% 47242141 NA +3465 chr4 + 190214555 79157428 79157427 79157596 169 TAATTTGTTCCTTTTTATGGCTGAGTGGCATTCCATCATATACATATGATGGAATATATATATACACACATATATATGTATGTATATATACATATATGTATATGCATGTATATATACACATGTACACATATGTAT--------------ATGTATGTATATATACATATATA-CGTGTGTGTGT chr4 - 94230402 82359635 82359634 82359818 11870585 11870584 11870768 184 TAATATGTTCCTGCCTGCTGCTGACTCATATTTTTCAAAATATATCTGGGAAGGAAAACATATGCACATGTGTTTTAATATATTTGTTTCCCTGCATGCGTAGAGATAAATATACACAAATATTCACAAATGCATGCAGCAGCCCGCACATGTATGCTTATTGCTGCATGTGCCGTGTGTGCGT ....x.......x::.::x.....x.x::...::x:x.x...:..x..:x::::x.x.:....:....::.:.x.xx:...:.x.:.x.x.x.::...::..x:x..:x.....:...x..:.x....x...:..--------------.......:x...xxx:::..:.:-........:.. 135M14I23M1I11M 101/169 59.8% 184/94230402 0.0% 15/169 8.9% -3202207 -91028195 +3271 chr4 + 190214555 79157529 79157528 79157617 89 ATGCATGTATATATACACATGTACACATATGTATATGTATGTATATATACATATATACGTGTGTGTGTATATACACACATATATATACA chr4 - 94230402 61485373 61485372 61485452 32744951 32744950 32745030 80 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT---------TCTGTAGATGTATAGATAGATAGGTGTACA ..::.::..:...:.......:....x.:...:...........x....:---------.x...:x:.:....x.:.x...x:.:.... 50M9D30M 57/80 71.2% 80/94230402 0.0% 9/80 11.2% 17672156 NA +3383 chr4 + 190214555 79157540 79157539 79157610 71 TATACACATGTACACATATGTATATGTATGTATATATACATATATACGTGTGTGTGTATATACACACATAT chr4 - 94230402 73172132 73172131 73172202 21058201 21058200 21058271 71 TATGCAAACGTGCAGTTATTTATGTGCCTATCTATGTACATAAACACGTGTGTGTTTATAAGCACACAAAT ...:..x.:..:..xx...x...:..:x.:.x...:......x.:..........x....x:......x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 5985408 NA +3168 chr4 + 190214555 79167148 79167147 79167220 73 ATATATATGTATATGGAGAGAGAGAATAGACAACTTATTTTATATATATACATACATATATATACATATATAC chr4 - 94230402 76236349 76236348 76236421 17993982 17993981 17994054 73 ATGTATATATATATAGAGAGAGAGATCTAATACCTTTAATTGTATATATATATATTTGTTTATACAGAGAAAC ..:.....:.....:..........x:x:.:.x...xxx..:........:...:x.:.x......x.x.x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 2930799 NA +3265 chr4 + 190214555 79167160 79167159 79167247 88 ATGGAGAGAGAGAATAGACAACTTATTTTATATATATACATACATATATATACATATATACACATATATGTATGTATACACACACACA chr4 - 94230402 45271654 45271653 45271728 48958675 48958674 48958749 75 ATGAGGAGAAAGATTGGAAAAATCACTA-------------ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ...::....:...x.:..x..x.:.:.x-------------..x.x:....x:...........:....:..........x....... 28M13D47M 57/75 76.0% 75/94230402 0.0% 13/75 17.3% 33895506 NA +3227 chr4 + 190214555 79167165 79167164 79167310 146 GAGAGAGAATAGACAACTTATTTTATATATATACATACATATATATACATATATACACATATATGTATGTATACACACACACACACCCACATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGTGGTAAG chr4 - 94230402 17303241 17303240 17303386 76927017 76927016 76927162 146 GAGGAAGAATTGATATTACGTGTTTGCTATTTGCATACATAAATATAGAAACACACATATAAGTGTATGTCCTCCTACACATATACTCACTCTTCTGCACAAAAGAAGATAAGTATAGTGAATACAGGAAGGAAAATCATAATCAG ...::.....x..:.x:x::.x..xxx...x.:........x.....x.x.:.:...:...x:.......x:x.x:.....:.:..:...x:x.x.::.:.x.x:x...x.::x.x..x..:x:x::..::..:.:x.:.::.x.. 146M 83/146 56.8% 146/94230402 0.0% 0/146 0.0% 61863924 NA +3386 chr4 + 190214555 79167252 79167251 79167431 180 CACATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA---GAGAGAGAC---GTG-------GTAAGAAATCAGGGAAGAGTA--CAGTCCCATCAGGACTTATGTTTTGGGAAATTTACTTCAACAACACTTAACAGTTATAAAAGCTCTTAACATCAGTCTAAATCAA--GTCCAATGATAGGGATAGAT chr4 - 94230402 67274514 67274513 67274707 26955696 26955695 26955889 194 CACTTAAATATGTATATATAGAGAGAAGGAGAGAGAGAGAAATGTGTAGGAAACTCAGTGCTCTAGAGTAAGAATCCAGGAGAGAGAAAGCATCTAAATAAGGCCTTGTTCTCAGTTGAATTACGCTCACCATGA---GACTAGTACTTCAGTACTCAACAAGAGTTCAGATTAAATATATAATCATAGGGTTAAAT ...x..x....:..............::............:.---.x::..:..---...-------.......x:....::....x.--..x::xx..x...x...:.x:.:x.xx:....xxx:...x..xx.---:..x:x..:xxx..:x..:....xx...::.:..:..--:.x:...x......x..:.. 42M3I9M3I3M7I21M2I45M3D37M2I20M 117/177 66.1% 194/94230402 0.0% 20/177 11.3% 11892738 NA +3105 chr4 + 190214555 79189146 79189145 79189193 48 AAAAAAAAAAAAAAAAAAACTTATGAAGGAGGCAGAGATATTTCAAAG chr4 - 94230402 18347661 18347660 18347708 75882695 75882694 75882742 48 AAAAAAAAAAAAGAAAAAACATATGAAAAATGCAGAATTCTTTCAAAG ............:.......x......::.x.....:x.x........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 60841485 NA +3174 chr4 + 190214555 79196929 79196928 79196989 61 GGACCTCTTTTGGAAGATGAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA chr4 - 94230402 11220520 11220519 11220580 83009823 83009822 83009883 61 GGAGCACTTTTGAGAGATGAAAAAGTAAAGGAAAAAAAAAAAAAAGTAAGCTAAAAAGGAA ...x.x......::...........xx..::..............:x..:xx..:..:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 67976409 NA +3287 chr4 + 190214555 79196937 79196936 79197001 65 TTTGGAAGATGAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 13722712 13722711 13722776 80507627 80507626 80507691 65 TTTGGGGGAAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAATTAAATAA .....::..x:......................::..x.:x...:..:...x.::..xx...x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 65474225 NA +3281 chr4 + 190214555 79231839 79231838 79231926 88 CGGCAAAAATCCTGAATATGGAACATTTTCTAGGACAAATCATTCATATATATATATGCATACACACATATATGTATATACACATATA chr4 - 94230402 45922231 45922230 45922312 48308091 48308090 48308172 82 CAGCAAATATCTGGAA---GGAATGCATTCCA---CACCTCATTTAAGTATATATATACACACACACATGTATTTAAAGACACACATA .:.....x...:x...---....:::x...:.---..xx.....:.x:.........:..:........:...x..x.x.....:... 16M3D13M3D53M 61/82 74.4% 82/94230402 0.0% 6/82 7.3% 33309608 NA +3048 chr4 + 190214555 79246338 79246337 79246403 66 CCTCTCTCCGAGAAACACCCAAGAATAATCAATAAATACTAAAAAAAAAAAAAAAAAAAAAAGAAA chr4 - 94230402 70053545 70053544 70053610 24176793 24176792 24176858 66 CTTGTCATTGAGAAAGAACTAAGAATAATAAATGAATAGTAAAAAAAAAAAAATGAAGTTGAAAAA .:.x..x::......x.x.:.........x...:....x..............x:..:xx:.:... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 9192793 NA +3684 chr4 + 190214555 79303039 79303038 79303193 155 CATCCTTCCCTTTTCATTCCTGTTCTCTTGAGGCCTTTTATATATATATATATATATATATATATATATATATATATATATATACCTCCCAACATAAATATTTTCAAAAAGCATGCAAAAAAGCAGTCCTAACTGGGAAAGAAACAACATAAGAG chr4 - 94230402 45203516 45203515 45203655 49026748 49026747 49026887 140 CATGCTTCACCACTC-TTCCTGTGTTCT-----CCTTTTATATATATACACAAATATGTATCTACAAATATTTTTGAAGAATTATAGTCAAACGAAAACATTTTTAAAAAGGGCACA------CAGTCATAAT---GGCAAAATCAAGATGAAAG ...x....x.:x:..-.......x:...-----...............:.:.x....:...x..:.x....x.x.:x.x.xx..:xx:.x...:x...:.....:......x:::..------.....x...:---.:x.:..x...x..:.:.. 15M1D12M5D84M6D10M3D19M 97/140 69.3% 140/94230402 0.0% 15/140 10.7% 34099523 NA +3091 chr4 + 190214555 79349409 79349408 79349450 42 TTTTTGTTTTGTTTTGTTTTGTTTTTTATTTGTTTGTTTTTT chr4 - 94230402 23073760 23073759 23073801 71156602 71156601 71156643 42 TCTTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTT .:...x..:.............x....:.............. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 56275649 NA +3110 chr4 + 190214555 79349508 79349507 79349590 83 CTGCAAGCTCCACCTCCTGTGTTCATGCCATTCTCTTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGCCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:x.:xx.x..:...x.....x.:xx...x.xx.x........:..:.........:......x...--.:....::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 61152382 NA +3136 chr4 + 190214555 79352805 79352804 79352903 99 AGAGAAAGAGACAAAGACAGAGATGGACAGAGAAAGACAGAGAAAAACAGAAAGAGAGAGAGAGAGACAGAAACAGACAGACAGGGACAGAGAGAGAGA chr4 - 94230402 30533164 30533163 30533262 63697141 63697140 63697239 99 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAA .:.x...:..:x.:.:.x.:.::x..:x..........x.x......xx:..:.xxx:...x.:....x....:...x::.:::...x.:.:.....:. 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 48819641 NA +3810 chr4 + 190214555 79375976 79375975 79376148 173 AGATAAACATGATCTATAAATGTAGTATGTACTTGTAAATATGTATACCTATATATGTATGTATAAATGTATGTAGGTATATATATACA---TATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATGTGTATATATACATATACACACACACATA chr4 - 94230402 35554867 35554866 35555041 58675362 58675361 58675536 175 AGAAGAAGGTGAGCTAGGACTCTAGTAAACAGGTGCAAGGTTGCAT-CTTTGAAAAGTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ...x:..x:...x...x:.x.x.....x::.xx..:..:xx..:..-.:.xx.x.x......x.xxx...x.x..x:xx.x..x:..:.---..x....:.x..x....:....:.:....:x:.:.....:...:......x.x.......x.x..x..x:.x..x.:...x.:. 46M1D42M3I84M 109/172 63.4% 175/94230402 0.0% 4/172 2.3% 43821109 NA +3171 chr4 + 190214555 79375980 79375979 79376069 90 AAACATGA-TCTATAAATGTAGTATGTACTTGTAAATATGTATACCTATATATGTATGTATAAATGTATGTAGGTATATATATACATATAT chr4 - 94230402 51294101 51294100 51294191 42936212 42936211 42936302 91 AAGCATGAATTTAAAAGTGTTTAGAGTATTTCAGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCAT ..:.....-.:..x..:...xxx:x...:..xx:x.....::..:..:.:.::::.:x.::.x..............:.........::.. 8M1I82M 59/90 65.6% 91/94230402 0.0% 1/90 1.1% 28081879 NA +3237 chr4 + 190214555 79376006 79376005 79376148 143 ACTTGTAAATATGTATACCTATATATGTATGTATAAATGTATGTAGGTATATATATACATATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATA------TGTGTATATATACATATACACACACACATA chr4 - 94230402 40224615 40224614 40224758 54005645 54005644 54005788 144 ACTAGCACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA---ATATAATTTGTTGATTCTGCATTCAT-TACACACATAAGTA ...x.:.x..:.:..x.x...-...:x...::...x:.:xx.x.xx..::.xxx:x...x..x.x...........:.:..........x...:......:.x..---.....------..xx.x.::..x...-........:.x:.. 21M1D83M3D5M6I15M1D14M 94/138 68.1% 144/94230402 0.0% 11/138 8.0% 39151391 NA +3273 chr4 + 190214555 79376034 79376033 79376120 87 ATGTATAAATGTATGTAGGTATATATATACATATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATG chr4 - 94230402 70982597 70982596 70982682 23247721 23247720 23247806 86 ATATATATATTTATTCATGTAACTTTTTTCCT-TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ..:....x..x...x:.x...xx.x.x.x.x.-.:.:.......:...:...::....:.x....x..:...:.:......:.:... 32M1D54M 60/86 69.8% 86/94230402 0.0% 1/86 1.2% 8393437 NA +3110 chr4 + 190214555 79376055 79376054 79376121 67 TATATATACATATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATGT chr4 - 94230402 32959568 32959567 32959634 61270769 61270768 61270835 67 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .:.:..:x:...:..:x....x......:...::..............::x...:..x...:xx... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 46416487 NA +3352 chr4 + 190214555 79376057 79376056 79376151 95 TATATACATATATATGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATGTGTATATATACA-----TATACACACACACATATAT chr4 - 94230402 23310273 23310272 23310372 70920031 70920030 70920130 100 TATCTGCAAATGAACGAGTTTCAGTGTATGTACACATACATATCTACGTATACATACAGGTATTTGTGGATGTCAGAGTTTTGTACACACGTGCATAGAT ...x.:..x..:x.:.x..x.xx..:.:....:.:........x..:...........x:...x...:x..:.xx:-----.:.......:::....x.. 76M5I19M 65/95 68.4% 100/94230402 0.0% 5/95 5.3% 56065784 NA +3044 chr4 + 190214555 79376071 79376070 79376132 62 TGTGTGTGTGTATGTGTATATATACATATATATGTATACATACATATATGTGTATATATACA chr4 - 94230402 47095165 47095164 47095226 47135177 47135176 47135238 62 TGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ....:......:...::.:.:......:..:..:x.:xx..x...:.:.:..:.....:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 32280906 NA +3822 chr4 + 190214555 79376075 79376074 79376176 102 TGTGTGTATGTGTATATATACATATATATGTATACATACATATATGTGTAT--ATATACATATACACACACACATATATATGAGGAAGAAGCTCTGGCTATCTT chr4 - 94230402 8395789 8395788 8395888 85834515 85834514 85834614 100 TGTGTGTATGTGTGCATAAACATGTA----TTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATT .............::...x....:..----.x......::...::x.::..--...:...:.:.........x.:.:.x....:x..:..:.:.x::...:x.. 26M4D21M2I51M 69/98 70.4% 100/94230402 0.0% 6/98 6.1% 70980286 NA +3033 chr4 + 190214555 79376078 79376077 79376140 63 GTGTATGTGTATATATACATATATATGTATACATACATATATGTGTATATATACATATACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ....::....:.:.:....:.:...::.:......x.:xx..x::.:.:...:.......... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 32280914 NA +3311 chr4 + 190214555 79376085 79376084 79376155 71 TGTATATATACATATATATGTATACATACATATAT--GTGTATATATACATATACACACACAC-ATATATATGA chr4 - 94230402 37363040 37363039 37363113 56867290 56867289 56867363 74 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAA ...:..:....x.:.....::..:..:.x......--........:.::..:..:x.......-....:...:. 35M2I26M1I10M 54/71 76.1% 74/94230402 0.0% 3/71 4.2% 42013045 NA +3185 chr4 + 190214555 79382873 79382872 79382918 46 AAAAACAAAAACAAAAAACAAACAAAAAAACAATGACATTTTCACA chr4 - 94230402 49173886 49173885 49173931 45056472 45056471 45056517 46 AAAAAAAAAAAAAGCAAACAAACAAAAAAACAATGGCATTGTCACA .....x.....x.:x....................:....x..... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 30208987 NA +3129 chr4 + 190214555 79432813 79432812 79432876 64 TGAAGTACACTCAATAAATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 31024824 31024823 31024886 63205517 63205516 63205579 63 TGAAATA-ACCCAACAAAAATTCCTTTTTTTTTTTTTTTTTCTTCTCTACTCTGCCTCTTGAAA ....:..-..:...:...x...:..................:..:.:.x:.:.x::.:....:. 7M1D56M 47/63 74.6% 63/94230402 0.0% 1/63 1.6% 48407989 NA +3175 chr4 + 190214555 79476672 79476671 79476788 117 AGCTAG--ACCCTAGCT-----CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGGAACCATCTGATTCCAGGGAAGGCAAGTTGGGAGAAAAGAACTGAAATCAAAAATATCA chr4 - 94230402 25339674 25339673 25339797 68890606 68890605 68890729 124 AGCTAGGGACCATGGCTAGCAGTGAAATAAGATAAAGTAAAAGAAAAAAAAAAAAAAAGCAATTCATAGAAAATGAGACCAGGAAACAAAAATGTGAAAATGAGACTGGGAAACAAAAATGTTA ......--...x.:...-----::...x..:.x...:x....:...............:x....x:x.xx.xx...xx.....:..x:x..:.xx.:.:.x:...x:x.:..x.......:.:. 6M2I9M5I102M 78/117 66.7% 124/94230402 0.0% 7/117 6.0% 54136998 NA +3150 chr4 + 190214555 79499510 79499509 79499557 48 CAAGAAACACAAATGGTACAAGACAAACAACAACAACAACAACAAAAA chr4 - 94230402 30498578 30498577 30498625 63731778 63731777 63731825 48 CAAAAGAAACAGTTGGTACAAAAAAACCAACAACAACAACAACAAAAA ...:.:.x...:x........:.x..x..................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 49000932 NA +3220 chr4 + 190214555 79512743 79512742 79512815 73 ATATGTGAAGTCACTACATATATATATACATATATATATATATATATTTTTTTTTTTTTTTTGACAGAGTCTT chr4 - 94230402 8681923 8681922 8681993 85548410 85548409 85548480 71 ATGTCTGATATAAATATATATATGTATGCACACACATACATATA-ACTCTTTTTTTTTTTTTGA-AGAGCTTT ..:.x...x:.x.x..:......:...:..:.:.:...:.....-.:.:...............-....::.. 44M1D19M1D8M 54/71 76.1% 71/94230402 0.0% 2/71 2.8% 70830820 NA +3104 chr4 + 190214555 79512757 79512756 79512804 48 TACATATATATATACATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735395 1495008 1495007 1495055 48 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTT .:.....x.....::..:..:.:...............:.x....... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -13222591 -81007811 +3159 chr4 + 190214555 79512764 79512763 79512815 52 ATATATACATATATATATATATATATTTTTTTTTTTTTTTTGACAGAGTCTT chr4 - 94230402 5683041 5683040 5683092 88547311 88547310 88547362 52 ATATACACACACATACATATATATGATTTTTTTTTTTTTTTTGAGGAGTTTT .....:...:.:...:........:x...............x:x:....:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 73829723 NA +3000 chr4 + 190214555 79514481 79514480 79514547 67 ACACACACACACACACACACACACACACACACACACACACACACACACACACACTCTGGCTATACCC chr4 - 94230402 33416706 33416705 33416772 60813631 60813630 60813697 67 ACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACAGAAGACCTGACTACACCC ..:..:x.x..x.........:.........x:x......xx.x.....x.x:x:...:...:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 46097775 NA +3024 chr4 + 190214555 79538457 79538456 79538525 69 TTATGCTCCTACTTTGATTTTTTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 91770044 91770043 91770112 2460291 2460290 2460359 69 TTGTGTTGCTGTGTTGGCTTTTTTTAAATTTTTTTTTCCATTATTCCATTTTTTTTTTTCTCTCTTGTT ..:..:.x..::x...::......x..x.........::x..x..::x...........:.:.:..x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% -12231587 -81998815 +3066 chr4 + 190214555 79538467 79538466 79538540 74 ACTTTGATTTTTTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 - 94230402 88358298 88358297 88358371 5872032 5872031 5872105 74 ACATTGATTTTTATATATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCTGGAGGAAAAGGTGTTT ..x.........x..x........:xx::..xx..:.:..................:.xxxx..:.x..x..:. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% -8819831 -85410571 +3750 chr4 + 190214555 79572418 79572417 79572492 75 ACTATTAATATCCCTATTTTAATAGATGAGAAAACTGAGGCACAGAGAGGTTAAGTAATTTTCTCAAGGTTTCGG chr4 - 94230402 10729193 10729192 10729266 83501137 83501136 83501210 74 ATTACTATCAGCTCCATTTTA-CAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGG .:..:..x:.x.:.:......-:..:..:...............x.x..............x.:..::..:.x.. 21M1D53M 56/74 75.7% 74/94230402 0.0% 1/74 1.4% 68843225 NA +3110 chr4 + 190214555 79608275 79608274 79608340 66 GTTCTTGTCCTTTGCCCTCTTTTAAATGGGACTTTTTTTTTTGTTTTTTTGTTTTTGTTGTTTTTT chr4 - 94230402 13919525 13919524 13919590 80310813 80310812 80310878 66 GTTCTTTTCATTTGCAGTATTATTGCAGAAACGTTTCTTTTTGTTTGTTTGTTTTTGTTTTTTTTT ......x..x.....xx.x..x.x:xx.::..x...:.........x............x...... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 65688750 NA +3027 chr4 + 190214555 79609436 79609435 79609489 54 AGTTTGAC---TTCTTCTTTTCCTATTTGGATGTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37851761 37851760 37851817 56378586 56378585 56378642 57 AACTTGACCCTTTCTTCTCTGCCTGTTTGGGTTTCTTTTCTTTTTTTTTTCTTTATT .::.....---.......:.x...:.....:.x......:..........:...x.. 8M3I46M 44/54 81.5% 57/94230402 0.0% 3/54 5.6% 41757675 NA +3080 chr4 + 190214555 79609457 79609456 79609508 52 ATTTGGATGTCTTTTTTTTTTTTTTTTTTTTTTTTCTCTTGCCTGGTTCCTC chr4 - 94230402 60688291 60688290 60688342 33542061 33542060 33542112 52 ATTTAGGAATCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTC ....:.:x:..................::.:.:.......x..:x....:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 18921166 NA +3231 chr4 + 190214555 79654641 79654640 79654684 44 TTATATATATATATACACACACACACACACACATATATTTAGGT chr4 - 94230402 66904845 66904844 66904888 27325515 27325514 27325558 44 TCATATATGTACGTACACACACATACACACACACATATTTAAGT .:......:..::..........:.........:.......:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 12749796 NA +4599 chr4 + 190214555 79687669 79687668 79687718 50 ATCAATATATCTTGGAATGGAAAGGGAAGAGAATGTGAAGGGCATCACTT chr4 - 94230402 47631529 47631528 47631578 46598825 46598824 46598874 50 ATCAATATATCTTGGAATGGAAAGGGAAGAGAACGTGAAGGGCATCACTT .................................:................ 50M 49/50 98.0% 50/94230402 0.0% 0/50 0.0% 32056140 NA +3604 chr4 + 190214555 79730593 79730592 79730704 112 TAAACTCCATATATATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATATATATGTATATGTATATATGTATATGTACATATATTCCACTAATTCT chr4 - 94230402 4417339 4417338 4417446 89812957 89812956 89813064 108 TGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATG----TATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACT .:.:x.::.x.:...................x.x...:..:...:x.x:.x..:::...----...xx.x.:..x.:x.....:::....x..:x.....x....x..:x.. 59M4D49M 72/108 66.7% 108/94230402 0.0% 4/108 3.7% 75313254 NA +3080 chr4 + 190214555 79730596 79730595 79730705 110 ACTCCATATATATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATATATATGTATATGTATATATGTATATGTACATATATTCCACTAATTCTG chr4 - 94230402 70982592 70982591 70982696 23247707 23247706 23247811 105 ATTTCATATATATATTTATTCATGTA-----ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTG .:.:...........x:.:x..:::.-----..x:x:x:x:x...:.:...........:..:......x:..:x..:.:...::..::...:..:x..x.x.x..::.. 26M5D79M 65/105 61.9% 105/94230402 0.0% 5/105 4.8% 8748004 NA +3227 chr4 + 190214555 79730600 79730599 79730674 75 CATATATATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATATATATGTATATGTATAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:x..::.::.::..:.:......:..x.:.:......x.x.:.:..:......x.::..:..x......:.:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 8100469 NA +3055 chr4 + 190214555 79730605 79730604 79730659 55 ATATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATATA chr4 - 94230402 66904847 66904846 66904901 27325502 27325501 27325556 55 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA ......::..::........::.........:..:.x..x..x:.x.......:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 12825758 NA +3032 chr4 + 190214555 79730606 79730605 79730658 53 TATATACACACACACACACGCACACACACATATGTATATGTGTATGTGTATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x..x..........:x..........x.:..::.:....:..:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -7642135 -86588267 +3159 chr4 + 190214555 79778515 79778514 79778586 72 AAGCAAAAATAGACAAACAAAATTACATCAAACAAAATACCTCTGCATAGCAAAGGACACAATCAACAGAGT chr4 - 94230402 91565224 91565223 91565295 2665108 2665107 2665179 72 AAACAAAAAAAAAAAAGCAAAACCATATCAAACAACCTGCATCTGTGCATGGAAGCATACAGTCGACAGAAT ..:......x.:.x..:.....::.:.........xx.:.x....:::.xx:...x.:...:..:.....:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% -11786709 -82443693 +3228 chr4 + 190214555 79779040 79779039 79779140 101 AATCATATGATGTATATATATATATATATA---TATATATATATATATATATATATATACACACACACACATACACACACACACATGAGTATATATGTATCTCA chr4 - 94230402 10913764 10913763 10913867 83316536 83316535 83316639 104 AAGTAGACGATACACATATCTGTCCAGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCACTCCCAAGACTGCATGCATCTCA ..x:.x.:...::.:....x.:.x:.x..x---...:...:...:.:..:...x.:...:.........:.:x.x..:x...x.x::..xx.::...:...... 30M3I71M 65/101 64.4% 104/94230402 0.0% 3/101 3.0% 68865276 NA +3598 chr4 + 190214555 79779043 79779042 79779127 85 CATATGATGTATATATATATATATATATATATATATATATATATATATAT--ATACACACACACACATACACACACACACATGAGTA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTG-TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACAC--ACACAGACACAAATGAATA ...:..-.....:.:.::...x.:..:...x..:....:...::x..:..--..............--.....x.....x....:.. 6M1D43M2I14M2D19M 64/82 78.0% 84/94230402 0.0% 5/82 6.1% 71383256 NA +3145 chr4 + 190214555 79779045 79779044 79779118 74 TATGATGTATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACACACAC chr4 - 94230402 14964811 14964810 14964884 79265519 79265518 79265592 74 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.x:..x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::..:.......... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 64814234 NA +3095 chr4 + 190214555 79779049 79779048 79779122 74 ATGTATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACACACACACAT chr4 - 94230402 54293154 54293153 54293227 39937176 39937175 39937249 74 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATAT ...:.:..x...:.......:...:.:...:xxx:...:..x.xxx::......x...:........:.:.:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 25485895 NA +3480 chr4 + 190214555 79779049 79779048 79779124 76 ATGTATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACACACACACATGA chr4 - 94230402 8395796 8395795 8395871 85834532 85834531 85834607 76 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ....:.::...x.:..:...x..:....:...::x..:..xx...:.............:.x.....x.::x..:. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 71383253 NA +3297 chr4 + 190214555 79779050 79779049 79779113 64 TGTATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 71383251 NA +3666 chr4 + 190214555 79779050 79779049 79779121 72 TGTATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.........:.......x..... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 71383259 NA +3341 chr4 + 190214555 79779052 79779051 79779121 70 TATATATATATATATATATATATATATATATATATATATATATACACACACACACATACACACACACACA chr4 - 94230402 14964814 14964813 14964883 79265520 79265519 79265589 70 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx.........:............ 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 64814238 NA +3285 chr4 + 190214555 79779786 79779785 79779933 148 GATTATTCACAATGTTTATATATGCCAAACAAATTCATACACCTAAAATATATAAAATTTTTGCCAACTATACCTCAATAAATATGAAATAAAACTAGAGAAGTCACCTGCAAAGAAAGAAAAAGAGAGAGAGAGAGAGAAAGGAAGA chr4 - 94230402 78791745 78791744 78791858 15438545 15438544 15438658 114 GAATTTCCACACTGTTTCCATTTGCCAAGAAG---------------------------TTTGCTAA-------TAAACAAACATTAAACAAAACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAA ..x.x.:....x.....x:..x......:x.:---------------------------.....:..-------.x..:...:..x...:.....x.:.x..::x..:xx.x..:::.:.....:.:...............x...:. 32M27D8M7D74M 80/114 70.2% 114/94230402 0.0% 34/114 29.8% 988041 NA +3221 chr4 + 190214555 79779947 79779946 79780033 87 AAAAAAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAGCAAAGAAAA chr4 - 94230402 32280614 32280613 32280700 61949703 61949702 61949789 87 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAAA ........:......:........::...x.xx::..::..x..:..x:..:x.x:..:::..x.x..x.:x.:..xx......... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 47499333 NA +3416 chr4 + 190214555 79779951 79779950 79780086 136 AAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAGAAAGAA--AGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAGCAAAGAAAAT-------AATACCAAGTTGCTATTCCAACTCAAAGAAAACT----AAAAAGACTAACAACAAA chr4 - 94230402 71208233 71208232 71208379 23022024 23022023 23022170 147 AATGGGAAGAAGGAAACAAACAAATATTGAAAAAACAGAACTAGAGACAAGAAAAAGAAACAAGAAAACAACAGAACTGAGTACATATTAGTAAACATGAAATAATTCATCTAACTC--TGAAATTTTGAAAAAAAAACCAACAAAAAA ..x:.:..........x...x...x.xx.....:.x....--...:.x..:.:.......x..:.:..x:.x...:.x:..x.x..-------..:.:x..:.x::.xx..:.....--x....x:.----.....:..:.....x... 40M2I44M7I24M2D8M4I18M 93/134 69.4% 147/94230402 0.0% 15/134 11.2% 8571718 NA +3070 chr4 + 190214555 79784771 79784770 79784842 72 CTTTTCTTATTAATTTTCAAAGTTGTTATTTGAAATAGATTTATTTTGTCTTGTGTTTTTTTGACATATAAT chr4 - 94230402 9319399 9319398 9319470 84910933 84910932 84911004 72 CTTTTCATATTTATTTTCAAAAGTTTTATTTGACATACACTTATATTGATGTGTGATGCTGTAACATTTTAT ......x....x.........:x.x........x...x.:....x...x:x....x.x:.x.:....x.x.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 70465372 NA +3191 chr4 + 190214555 79796248 79796247 79796319 72 CTGCCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTTCTTTTTCTT chr4 - 94230402 88442027 88442026 88442098 5788305 5788304 5788376 72 CTGCTTACTCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTTT ....:.:.::..:..x::..:.x...........x:......:x.::..........xx.x.x....x.:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% -8645779 -85584623 +3248 chr4 + 190214555 79796274 79796273 79796401 128 TTCTTTCTTTCTTTCTTT------CTCTTTCTTTCTTTCTTTTCTTTTTCTTTTTCTTTCTTTTTTCTTCTTTTCCCTAAACACTTTTCTTTCTTTCTCTCTCTCTTTCTTTCTCTCTTTCTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAAC--TTCTGTTTCTTTCTCTCTCTCT--------CTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x.::..:::....:...:....:::.:x:.:.:.x.x..:.x.:.:xx::..:...--..:.x.................--------....x.xx..::........ 18M6I58M2D22M8D20M 78/118 66.1% 124/94230402 0.0% 16/118 13.6% 36714373 NA +3036 chr4 + 190214555 79897055 79897054 79897105 51 GCTAAGTAAGTAGGAAAGGAAGGAAAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 56158336 56158335 56158386 38072017 38072016 38072067 51 GCTGAGGAACTCAGAAAGGATGGAAAAGGAAGGAAGGAAGGATGAAAACAA ...:..x..x.x:.......x.....................x.:..:x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 23738719 NA +3473 chr4 + 190214555 79899141 79899140 79899223 83 CTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCGAATAGCTGGAATTACAGGTGCCCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx.x..:...........::x...x.xx.x.....:..::.:.:.........:....x...--......:::. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 61702015 NA +3174 chr4 + 190214555 79910508 79910507 79910570 63 AAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAGAAAACAAAAACAAAAAAAACAGATAT chr4 - 94230402 32890895 32890894 32890957 61339446 61339445 61339508 63 AAGCAAGAATTAAGAGAAAAAAAAGAAAAAGAAAAAGATCATAAACCCACAAAGAACAGTTAT ..:x..:..xx..:................:.......xx.:...xx..x...:.....x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 47019613 NA +3021 chr4 + 190214555 79926854 79926853 79926912 59 AAGAAATTGTGGCATATATATGTGTGTATATATATGTGTGTATATACACATGTGTGCAT chr4 - 94230402 30605025 30605024 30605083 63625320 63625319 63625378 59 AAGAAACTGTAGCATACCTATGTTCCTGCATATATGCGTACACACACACACGTGCACGT ......:...:.....:x.....x:x.::.......:..::.:.:.....:...::.:. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 49321829 NA +3776 chr4 + 190214555 79926887 79926886 79926977 91 ATGTGTGTATATACACATGTGTGCATATATGTGTATATATACACATGTGCATATATGTGTATATATACGTGTGCATATATGTGTATATATA chr4 - 94230402 39267120 39267119 39267210 54963193 54963192 54963283 91 ATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ....:....x.x.x.x.xx.x:.:...x......:...:x:.:..:...xx.:.:.....:......x........x.:.:..x.....:. 91M 63/91 69.2% 91/94230402 0.0% 0/91 0.0% 40659767 NA +3338 chr4 + 190214555 79926910 79926909 79927004 95 CATATATGTGTATATATACACATGTGCATATATGTGTATATATACGTGTGCATATATGTGTATATATACGTGTGCATATATGTGTATATATACAC chr4 - 94230402 39267119 39267118 39267213 54963190 54963189 54963284 95 CATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAAAC ...:.....:x.x.x.x.xx:x:..::.x..:.......:x:::.::...xx.:.:.....:......x........x.:.:..x.....:.x.. 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% 40659791 NA +3094 chr4 + 190214555 79927013 79927012 79927059 47 ATATACATATGTGTATATATGTGTGTATATATATGTGCGTGTGTGTG chr4 - 94230402 19704280 19704279 19704326 74526077 74526076 74526123 47 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...:.:....::........x.......:.x:.....:......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 60222733 NA +21445 chr4 + 190214555 79931313 79931312 79931764 452 AATGAATAGAGTTAGCTTTATAAG-GGTTTAAGTCAGGGACACCAGCTGCAAATATTTTGTGCTTACCAATGTGTCTTCTTTCCTAAATTCCACTTGTGCCAACAGTGAGTAAAATGTTCTAGGATTTCCTCGCTTCTTCTCTCTCTCT-CTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCCAAACACCCCACCCCCACTCC---------------AACTTCCAGATAAATGCCAGTCATTTGGCCAGGGCTAACTCACAGAAGGTGCAGCAGGCACAGATGGCACTAATGCATAAATGTAATCTAGTAAAAGAATGCCAGCGCCAACCCCGAAAAGGTTCCAGATAAC-GCAGTGCACTTACAGGAAGTCTGTGATTGGCAAGGTTAAAGCTGCAA-CTGTGAGAGCTCACTGTCTGTTCCCAGATCAACAATAGAAATTCTCAAGCAAATGAGCATATTTAATTTATT chr4 - 94230402 47571386 47571385 47571847 46658556 46658555 46659017 462 AAAGGACACAGCAGATTTCATCAGCAGCTGAAGTGAAGG-CGTCAG-TGCAGGTGTTT-GCATTCACTGGTGTGTCTTCCTCCCTGAGATCCATTAGTGCCAGCAGCAAGCATAATGCT-TAGGCACCACTCTTAGCTTCTCTCTTCCTTCTTCCTCCTTCTCTCCCTCCCCCCTCCttttttttttcctctctctctctttttttttttttttGTGCACTTCCAGATAAATGCCAGTCATTTGGCCAGGGCCAACTCACAGAAGGTACAGCAGGCACAGATGGTACTAATGCATAAATGTAATCTAGTAAAAGGATGCCAACACCAACCCAGAAAAGGTTCCAAATAACTGCAGTGCACTTACAGGAATACAGTGATTGGCAAGGTGAAAGCTGAGATTTGCAAGAGCTTA----CTGTTCCCAAGTCAACAATAGAAATTCTACAACAAATGAGCatattt-atttatt ..x.:.:.x..:x:::..:..x..-:.:.x....x.:..-.::...-....::.:...-.:::.:..:::.........:.:...:.:x....:.x......:...::..:.x....:.-....xx::x...x:xx.........::..-..::...::......:...:.:.:.:..::::xxx:x..:.x.:.:.x..::---------------x..................................:..............:................:.............................:......:.:.......x............:.....-..................xx.x..............x.......x:.-:..::......:.----.........::.................xx.:...............-....... 24M1I14M1D6M1D11M1D60M1D29M1I52M15I133M1I47M1I13M4D47M1D7M 342/443 77.2% 462/94230402 0.0% 28/443 6.3% 32359927 NA +3046 chr4 + 190214555 79951576 79951575 79951624 49 AAAAAACAACAACAACAAAAAAAAAAAAACAACAAAAAGAACAACCAAA chr4 - 94230402 44643127 44643126 44643175 49587228 49587227 49587276 49 AAAAACCCACAACAACAACAAGAAAAAAACCACCAAAACAACAACTAAA .....x.x..........x..:........x..x....x......:... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 35308449 NA +3202 chr4 + 190214555 79974740 79974739 79974808 69 GGACTTATCTTAGACAAAAGTGTGAGCATATTGATTAAAAAAAAAAAGAAAAAGGAAGAAAATCTTGGT chr4 - 94230402 3762743 3762742 3762811 90467592 90467591 90467660 69 GAGCTTATCGGAAACATAAAGCTGTGTATATTCATTAAAAAAAAAAAGAAAAAAGTAGATAATATGGAT .::......xx.:...x..:xx..x.:.....x....................:.x...x...x.x.:. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 76211997 NA +3004 chr4 + 190214555 80011877 80011876 80011943 67 TTCAGGGACTGTGTCATCTGCATCTAATTTCCTTTTCTTCACTAAAAGCAAGTTATAGAATAAAAAA chr4 - 94230402 59915221 59915220 59915287 34315116 34315115 34315182 67 TCCTGGCGCTCTGCTATTTGCATTTAATTTCCCTTTCTTTATTAAAGACTAAATATAGAGGAATAGA .:.x..x:..x..::..:.....:........:......:.:....::.x.:x......:x..x.:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 20096656 NA +3060 chr4 + 190214555 80083091 80083090 80083162 72 AGTATACACAGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTATATGCAGATATATAG chr4 - 94230402 35554949 35554948 35555018 58675385 58675384 58675454 70 AGTATAGGC--TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAG ......x:.--..x......x..x.........::::.:..x....:.:..:...:...::x....:.:... 9M2D61M 50/70 71.4% 70/94230402 0.0% 2/70 2.9% 44528142 NA +3533 chr4 + 190214555 80083111 80083110 80083197 87 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTATATGCAGATATATAGCTCTGTCTACTTAGATAGACTGAGAACAACAGCAG chr4 - 94230402 50558510 50558509 50558595 43671808 43671807 43671893 86 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGA-AAAGTTTTTTTTAATAAGATTTACAGAAAAATATAGAAG ...::.....x..........::.....:..........x:....x.-.x..:.:.x.:..x.x....xx..x..:..xx.:..x.. 47M1D39M 62/86 72.1% 86/94230402 0.0% 1/86 1.2% 29524601 NA +4235 chr4 + 190214555 80098655 80098654 80098811 157 AGCCTGGGCAACAACAG----CAAAACTCCATCTCAAAAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGCGAGAGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAGGAAGGAAGTAAGGAAGGAAGGAAGAGGATTATAG chr4 - 94230402 30533129 30533128 30533286 63697117 63697116 63697274 158 AGTATAGGCAACAATTGTCTACAGCTTTTCTTCTTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACA---CCGGAAAGGAGAGGAATAAAG ..:x.:........:x.----..:xx:.:.x...:...x..:...:..........::.:.::.....:...xx.:..:.:..x:....xxx:.::x..:..xx...:x.:.::..x:.:....:.:::..:..::.---xx....:.:......x..x.. 17M4I116M3D21M 95/154 61.7% 158/94230402 0.0% 7/154 4.5% 49565526 NA +3418 chr4 + 190214555 80099498 80099497 80099580 83 GTCGTTTGTATATCTTCTTTATATATATATATATATATATATATATATATATATATATATATTTTACTATACTTTAAGTTATA chr4 - 94230402 13065309 13065308 13065391 81165012 81165011 81165094 83 GTAGTACGTATATACTCTCTCTTTATATACATATAAATTAGAATACATATATATTTGTATATATTACTTTATGCTATATTATA ..x..x:......x:...:.x.x......:.....x..xx:x...:........x.:.....x.....x..:x:..x:..... 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 67034189 NA +3204 chr4 + 190214555 80100327 80100326 80100422 96 CACAATGATGAAACTAGTAACCAGAAAACCAAAAACAAAACAAAATAAACAAAAAAAAACCTATTCCAATTATATTTCCACCTTTACTCCTTTTTA chr4 - 94230402 4338913 4338912 4338998 89891405 89891404 89891490 86 CAGAAAGCCAAAAGCAAAAACTGGAAAAACAAACAGAAAACAAAACAAACAAAAAAAAACCACCACCA---------CCACC-TTATTTCTTCTTA ..x..x.x::...x:.:x...::.....x....x.x.........:...............xx:x...---------.....-...:.:...:... 68M9D5M1D13M 64/86 74.4% 86/94230402 0.0% 10/86 11.6% 75761414 NA +3022 chr4 + 190214555 80104513 80104512 80104569 57 CTGGGCAACAAGAGTGAAACTCGGTCTAAAAAAAAAAAAAAGAAAAAGAAAAAAAGA chr4 - 94230402 68194415 68194414 68194471 26035932 26035931 26035988 57 CTCGGCTATATGACTGATACCAAGTTTAAAAAAAAAAAAAAGAAAGAAAGGAAAAGA ..x...x.:.x..x...x..:x:..:...................:.:.::...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 11910098 NA +3068 chr4 + 190214555 80127242 80127241 80127338 97 TAAAAGAAG---GAAAAGA----ATTACTAAAAATAATAAATAAATAAATACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCGGCATGAAC chr4 - 94230402 70278263 70278262 70278366 23952037 23952036 23952140 104 TAAAAGTAATCTGGAAAGATTTCATTACTGTACCTAGACAATGAGTAAATATTCAAAAGAAAAAGAAAAAAAACCAACAAAAAGAAACACCACCTGACACCAAC ......x.:---.:.....----......:x.xx..:xx...:.:......:.x....:.....:........xx..x.....:...x.xxx:.:.:..:x... 9M3I7M4I81M 68/97 70.1% 104/94230402 0.0% 7/97 7.2% 9848979 NA +3145 chr4 + 190214555 80133121 80133120 80133170 50 CAAAATATGTAAAGCATAAAAGAGTTGCTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 13131141 13131140 13131190 81099213 81099212 81099262 50 CACAGTATGTAAACCATAAATGGACAACTTTCTTTTTTTTTTTTTTTTTT ..x.:........x......x.:::x:....................... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 67001980 NA +3405 chr4 + 190214555 80133256 80133255 80133326 71 CTCCTGTGGTTCAAGTGATTCTCATGCCTCAGCTTCCCAAGTAGCTGGGATTACAGGCGCATGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTG-GGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:...-..........x...x..x.x......:.::...........:.:....x.:...--....::.. 6M1D54M2D8M 54/68 79.4% 68/94230402 0.0% 3/68 4.4% 61936117 NA +3000 chr4 + 190214555 80153480 80153479 80153566 87 TCTAATGCAAGTTTCATTACTGTATGTGTGTATATATATATAGATATATAGATATATATATTTCTTTTTTTTTTTCTGAGGCAGAGT chr4 - 94230402 36326428 36326427 36326514 57903889 57903888 57903975 87 TCTAATTCATGCTATCTTGATATATGTGTGTACATATATATAAAGATTCAAATAAATCAAGCTTATCATCTTCCTTAGAAGCAGGGT ......x..x.:.x:x..:x.:..........:.........:.x..x:.:...x..xx.x:.:x.:x.:..::.:x..:....:.. 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 43827052 NA +3403 chr4 + 190214555 80153614 80153613 80153692 79 CTGCAGCCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTAAGCCTCTCAAGTAGCTGGGATTACAGGCATGAGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:xx.x..:.::........:.x...x.xx.x..x.....:............:.:....--.:..x:.... 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 61956488 NA +3123 chr4 + 190214555 80195867 80195866 80195955 89 TTTGCCTGGGGTACTAACCAGAAAAGAGAAGGAAATACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652049 67652048 67652137 26578266 26578265 26578354 89 TTTACTTACTGCACCAAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ...:.:.:xx.:..:..xx.:.:x....::::xxx:....::...x...:...:..xx.x.x.:.:.:...................:. 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 12543818 NA +3841 chr4 + 190214555 80195886 80195885 80195957 72 AGAAAAG-AGAAGGAAATACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652065 67652064 67652137 26578266 26578265 26578338 73 AGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .......-...:....x.x.....::...x...:...:..xx.x.:.:.:.:...................:. 7M1I65M 56/72 77.8% 73/94230402 0.0% 1/72 1.4% 12543821 NA +3292 chr4 + 190214555 80195896 80195895 80195959 64 AGGAAATACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652075 67652074 67652137 26578266 26578265 26578328 63 AGGGAATTC-CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ...:...x.-.....::...x...:...:..xx.:.:.:.:.:...................:. 9M1D54M 48/63 76.2% 63/94230402 0.0% 1/63 1.6% 12543821 NA +3326 chr4 + 190214555 80195908 80195907 80195960 53 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 67652084 67652083 67652136 26578267 26578266 26578319 53 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .....::...x...:...:..x:.:.:.:.:.:.................... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 12543824 NA +3014 chr4 + 190214555 80198957 80198956 80199024 68 TTTAAATACCTGGGTTTTTTTGGGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTAGTGAT chr4 - 94230402 20565621 20565620 20565688 73664715 73664714 73664782 68 TTTAAATTCATTTATCTTTGTGGGTTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTTTTATAAT .......x.x.xx:.:...x.................x....x..x..x.:x..x...:...x:.:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 59633336 NA +3037 chr4 + 190214555 80198962 80198961 80199010 49 ATACCTGGGTTTTTTTGGGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTT chr4 - 94230402 11653753 11653752 11653801 82576602 82576601 82576650 49 ATCCCTCTGCTTGTTTGGGTTGCTTTTTTGTTGTTTTTTTTTTTTTTTT ..x...xx.:..x........x:......x................... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 68545209 NA +3204 chr4 + 190214555 80199678 80199677 80199737 60 TAAAAAATTATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704267 19704266 19704326 74526077 74526076 74526136 60 TGAAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .:..:x.x.x..x...::......::.......x.....:...x::.............. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 60495411 NA +3082 chr4 + 190214555 80199687 80199686 80199775 89 ATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATAT------------ATATATAATTCTGCCTGGAACTTCACCTCTA chr4 - 94230402 19704274 19704273 19704374 74526029 74526028 74526129 101 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATATTTTCAGGAAAGTGTCCTCTA ..x..x..::.......::.....:.x.....:...x::.............:x..x.------------..x..:...x:.x:.x....xx.xx...... 58M12I31M 63/89 70.8% 101/94230402 0.0% 12/89 13.5% 60495413 NA +3715 chr4 + 190214555 80212872 80212871 80212943 72 CTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.:.........:.x...x.xx.x........::.............:....x.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 62015746 NA +3075 chr4 + 190214555 80217058 80217057 80217098 41 CACACACACACACAAAAAGAAAAGAAAACGAAAAAGACAAA chr4 - 94230402 9599027 9599026 9599067 84631336 84631335 84631376 41 CACACACACACACAAAATTAAAATAAAACAAAAAAGACAAA .................xx....x.....:........... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 70618031 NA +3221 chr4 + 190214555 80217412 80217411 80217485 74 TTTATATACATTTATATATATATATATATATATATATATATAAATGTATATAAACATGCAGTACCTCTTTTAAA chr4 - 94230402 52487164 52487163 52487237 41743166 41743165 41743239 74 TTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCAGTAGTTTTTAAAAA ....x..:..:x........x...:.x..:...:.:.........xx.x...x.::.......x:.:..xx... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 27730248 NA +3053 chr4 + 190214555 80236917 80236916 80236989 73 CTCCGTCCCAAAAAACAAACAAACAAACAAACAAAAAACTATGCATTCATGGAAGAAACAATTCTTCTTCTGT chr4 - 94230402 64558411 64558410 64558482 29671921 29671920 29671992 72 CTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAA-AAATAAATATCTCTCTGT ....x:.........................x.....x.x.x:..xx::.:x..-...:..x.x.:::..... 54M1D18M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% 15678506 NA +3026 chr4 + 190214555 80284437 80284436 80284497 61 AACAACAACAATAACAAAACAACAACAACAACAACAACAAAGAAACAAACAAAAAATACTT chr4 - 94230402 71370655 71370654 71370715 22859688 22859687 22859748 61 AATCACAGAAATCATTAAACAACAATAACAATAACCAAAAACAAACAAACAAACAACCCTT ..:x...:x...x.:x.........:.....:...x.x...x...........x..:x... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 8913782 NA +3082 chr4 + 190214555 80311169 80311168 80311222 54 CAAAAAAAAAAAAAAAAAAACCCAGAAACCAACAAAACAAAACAAAATAAAAAA chr4 - 94230402 14334323 14334322 14334376 79896027 79896026 79896080 54 CAAAAAAAAAAAAAAAAAAACCAACCAACCAACCAAACAACAAACACTAGGAAA ......................x.xx.......x......x.x.x.x..::... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 65976846 NA +3295 chr4 + 190214555 80327655 80327654 80327721 67 TGGATTTTATATATACATATATATATAGAGAGAAGTTATATATATATATATATATATATATATATAT chr4 - 94230402 76236341 76236340 76236407 17993996 17993995 17994062 67 TGGATTTCATGTATATATATATAGAGAGAGAGATCTAATACCTTTAATTGTATATATATATATTTGT .......:..:....:.......x.x.......xx.x...:x.x..xx.:.............x.:. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 4091314 NA +3129 chr4 + 190214555 80337594 80337593 80337689 96 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCGGCCTCAGCCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACCAC chr4 - 94230402 18197117 18197116 18197202 76033201 76033200 76033286 86 CATCATGTTCTACAG-----CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:......xxx...-----:.:x:.:..:...:x:.......x.:...x..x........::...:xx.......:....x...-----...... 15M5D65M5D6M 62/86 72.1% 86/94230402 0.0% 10/86 11.6% 62140477 NA +3076 chr4 + 190214555 80355330 80355329 80355383 54 TTTGAAAAGTGTTCATGTCCTTTGCTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 34878795 34878794 34878848 59351555 59351554 59351608 54 TTGAAAAGGTGTTCATTTGCTTTTCTTTTTTTTTTTTTCCTTCTTCCAAACAGA ..x:...:........x.x....x..............::..:..:x.:..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 45476535 NA +3150 chr4 + 190214555 80390480 80390479 80390569 90 TCTCTCTCTCTCTATATATATGTATATATACACACATATATGTATATATGTATATATGTATACACACATATATGTATATATGTATATATG chr4 - 94230402 17853459 17853458 17853546 76376857 76376856 76376944 88 TTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGC--ATATGTAAAGAAGTATGCATG .:.....x...x.x.....::::....:..:.....x:..xx.x.:....:...:......x:x::.--.......x.x.x....::... 67M2D21M 60/88 68.2% 88/94230402 0.0% 2/88 2.3% 62537021 NA +3108 chr4 + 190214555 80390499 80390498 80390601 103 ATGTATATATACACACA-----------------TATATGTATATATGTATATATGTATACACACATA--TATGTATATATGTATATATGTATACACACATATATGTATATATGTATATATG chr4 - 94230402 17853431 17853430 17853546 76376857 76376856 76376972 116 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGC------ATATGTAAAGAAGTATGCATG .....x.:.x:......-----------------...x...x......:.:.............x:..--.x.....::..::..:...x.x.:.------.......x.x.x....::... 17M17I34M2I25M6D21M 73/97 75.3% 116/94230402 0.0% 25/97 25.8% 62537068 NA +3574 chr4 + 190214555 80390518 80390517 80390589 72 TATGTATATATGTATATATGTATACACACATATATGTATATATGTATATATGTATACACACAT-ATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:....:...:x.:.....::..:....x......xx:.:...:.:.:.......x......:-......... 63M1I9M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% 43027478 NA +3473 chr4 + 190214555 80390519 80390518 80390631 113 ATGTATATATGTATATATGTATACACAC-----ATATATGTATATATGTATATATGTATACACACATATATGTATATATGTATATATGTATACACACATATGTATATATGTATATATG chr4 - 94230402 17853431 17853430 17853546 76376857 76376856 76376972 116 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACT--CTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG .....x.:.x.:.:.:.x:x.x:....:-----x...x...x......:.:.............x:..xx.--x.:....:...:......x:x::........x.x.x....::... 28M5I38M2D45M 76/111 68.5% 116/94230402 0.0% 7/111 6.3% 62537088 NA +3545 chr4 + 190214555 80390550 80390549 80390627 78 TATGTATATATGTATATATGTATACACACATATATGTATATATGTATATATGTATACACACATATGTATATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-----ATATGTATA .:....:...:x.:.....::..:....x......xx:.:...:.:.:.......x......:.-----......... 64M5D9M 55/73 75.3% 73/94230402 0.0% 5/73 6.8% 43027510 NA +3376 chr4 + 190214555 80390551 80390550 80390647 97 ATGTATATATGTATATATGTATACACAC-----ATATATGTATATATGTATATATGTATACACACATATGTATATATGTATATATGTATACACATATATGTA chr4 - 94230402 17853431 17853430 17853532 76376871 76376870 76376972 102 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTA .....x.:.x.:.:.:.x:x.x:....:-----x...x...x......:.:.............x:..xx.x.:....:...:......x:x:::....... 28M5I69M 66/97 68.0% 102/94230402 0.0% 5/97 5.2% 62537120 NA +3351 chr4 + 190214555 80390583 80390582 80390683 101 ATGTATATATGTATATATGTATACACAC-------ATATGTATATATGTATATATGTATACACATATATGTATGTACACACATATGTAT------ATATGTATACATGTATACA chr4 - 94230402 17853431 17853430 17853544 76376859 76376858 76376972 114 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCA .....x.:.x.:.:.:.x:x.x:....:-------..x...x......:.:.............x:..xx.x....::..:.:......------.......x.x.x....:.. 28M7I54M6I19M 72/101 71.3% 114/94230402 0.0% 13/101 12.9% 62537152 NA +3396 chr4 + 190214555 80390591 80390590 80390673 83 ATGTATATATGTATACACACATATGTATATATGTATATATGTATACACATATATGTATGTACACACATATGTATATATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:.:.....:.:..:.x.:......x..::...:....:x....:xx...:::.:::.......:.x::.:.x...x... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 71994803 NA +3100 chr4 + 190214555 80390692 80390691 80390769 78 TGTGTATATATGTATATATGTATACACACATACATGTATATATGTATATATGTATATATACACACATATGTATATATG chr4 - 94230402 48167038 48167037 48167114 46063289 46063288 46063365 77 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG-GTAAATGTG ...:.....xxx:...........:.x.........x.:..:..:x:...:::..:..:...:::..:-...x..:.. 68M1D9M 53/77 68.8% 77/94230402 0.0% 1/77 1.3% 32223654 NA +3392 chr4 + 190214555 80390759 80390758 80390862 104 ATGTATATATGTATATATACATATACAC-------ATATATGTATATGTATATATGTATACACACATATATGTATATGTATATATGTATATACACATATATGTATATGTAT chr4 - 94230402 17853431 17853430 17853541 76376862 76376861 76376972 111 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTAT .....x.:.x.:.:.:.x.x.x::...:-------..x.:.x......:.:.............x:..xx.x.:....:...:......x.x::.....:.:x.x.x.... 28M7I76M 70/104 67.3% 111/94230402 0.0% 7/104 6.7% 62537328 NA +3158 chr4 + 190214555 80390793 80390792 80390850 58 GTATATGTATATATGTATACACACATATATGTATATGTATATATGTATATACACATAT chr4 - 94230402 51294134 51294133 51294191 42936212 42936211 42936269 58 GCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCAT .:.....::...x...:.:.....x.::..:.:......x:............:::.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 29096659 NA +3491 chr4 + 190214555 80390855 80390854 80390982 128 ATATGTATATGCGCACATATATGTATATATG-TATATACACACATATGCATATATGTATATACACACATATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATGTACACAC chr4 - 94230402 17853431 17853430 17853557 76376846 76376845 76376972 127 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATA--CACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATGACAGTTCACAC ..:.:x.:.x..:....x.x.x.:.:..x.x-.x...x:::x:.......:.........--....x:..xx.x.:....:...:......x.x::..:.....x.x.x....::...xxx..x..... 31M1I28M2D67M 83/126 65.9% 127/94230402 0.0% 3/126 2.4% 62537424 NA +3698 chr4 + 190214555 80390887 80390886 80391012 126 ATATACACACATATGCATATATGTATATACACAC-ATATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATGTACACAC chr4 - 94230402 17853431 17853430 17853557 76376846 76376845 76376972 127 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATGACAGTTCACAC ..:..x...x::.::..x.x.x.:.:..x:x.x.-..x...x......:.:........::...x::.xx.x.:....:...:......x.x::..:.....x.x.x....::...xxx..x..... 34M1I92M 81/126 64.3% 127/94230402 0.0% 1/126 0.8% 62537456 NA +3087 chr4 + 190214555 80390892 80390891 80390966 75 CACACATATGCATATATGTATATACACACATATGTATATATGTATATATGTATGTACACACATGTATATATGTAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x:.::.....::..:..:.:.....x....::....x.x.:...:::.:...x::..::..x....:...:. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 8760761 NA +3397 chr4 + 190214555 80390923 80390922 80391031 109 ATGTATATATGTATATATGTATGTACAC-------ACATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATGTATGTACACACATGTATATATGTATATATG chr4 - 94230402 17853431 17853430 17853546 76376857 76376856 76376972 116 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG .....x.:.x.:.:.:.x:x.x.:...:-------.:x...x......:.:........::...x::.xx.x.:....:...:......x.x::..:.....x.x.x....::... 28M7I81M 71/109 65.1% 116/94230402 0.0% 7/109 6.4% 62537492 NA +3670 chr4 + 190214555 80390991 80390990 80391068 78 ATGTATATATGTATGTACACACATGTATATATGTATATATGTATACACACACACATATATACACACATATATATACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ....:.:.....:..:.:.x........x..::...:....:x....:xx.:...:.:.:.......:.x.:.:.x.. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 71995203 NA +3286 chr4 + 190214555 80391012 80391011 80391074 63 CATGTATATATGTATATATGTATACACACACACATATATACACACATATATATACATATACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ...::.x..:::..:.x.......:......:...:......x.......:x...::.::... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 72794600 NA +3847 chr4 + 190214555 80391020 80391019 80391120 101 TATGTATATATGTATACACACACACATATATACACACATATAT------ATACATATACACATATATACACTCA-CACATATATCCTGCATTTTCTTTATGCATTCAT chr4 - 94230402 22514816 22514815 22514923 71715480 71715479 71715587 108 TATGTATCTATGTATACACAAACACAAAGATATGTACAAATGTTTGCAAGTACATATGCATGAatatatatatattatatatattgtgtatattcttcatatatatat .......x............x.....x.x...:::...x..:.------:.......:..::x.....:.:x:.-:.:......:x..:..x.....:..::..x:.. 43M6I25M1I33M 72/101 71.3% 108/94230402 0.0% 7/101 6.9% 57876204 NA +10926 chr4 + 190214555 80425500 80425499 80425840 341 TTTTCCTTGGGGAAG-GACTAATTCAGGCTTCTGTGAGGATAATGTTCAGTGTTATTTTCTCATTCCATTATCCATCCCTAGGTCTTTTCACTTAGAATCTTTTG------CAGATGTATAAATAGCATTGTTTCCCATGAAAGGGAAACTTGCCTTTAGCAAGCCTCCGAACAGTTGT-GCTCTGCACCTGCAGTAATAAAAT-TCGAGAGAGATAATGTACTGAATTTTAATCACATGTTGCCTTGTTACATATTC-ACTGTTTAAAAACATTTCCTTT-TTGTGGAGTTGTTAGTAAAAGGGTGGTGTTGCCAATTAAGCCACCGAACAGCTTAGGGAGTGATTTTACA chr4 - 94230402 47447611 47447610 47447950 46782453 46782452 46782792 340 TTTCCCCTAAGAAAGTGATTTATTTACAGCTATGTCAGCACTGAGT-CAGT-TCCTTTGCTCTTTTCCTTGGCACCCTCTA----TTTACACTCAGAATCTTCTGTGAGCACAGGTGTATGAATAGCATAGCT-CCAATTAATTTCAGTGTTGCCCACAGTGCTGCTCTGATCAGTCACCGCTGTGCACCTGCAGTAATAAAATACCAAGAGAGATAATGCACTGAATTTTAATCACATTTTGCCATGTTACACATTAGATGGCTTAAAAATGTTTCCTTTATTCCTAGGCTGTTTGTAACAG---GGTGTTACCAATTAAG-CACC-AACAGCCTGGGGAGTGATGTTACA ...:..:.::.:...-..:.x...:.x:x:.x...x..x.:x:x..-....-.:x...x...x..:.x..:x.xx:.:...----...x....:........:..------...:.....:........x.:.-..x..x..xxxx.:xx.....:x:..::xxx...:..x....:::-...x....................-:.:............:..................x.....x.......:...x-.:x.:.......::........-..x:x::.:....x....x..---......:.........-....-......:.:.........x..... 15M1I30M1D4M1D29M4D20M6I22M1D45M1I24M1I53M1I22M1I21M3D16M1D4M1D24M 244/329 74.2% 340/94230402 0.0% 23/329 7.0% 32977889 NA +4358 chr4 + 190214555 80431298 80431297 80431408 111 CTTTTCTTCCTC----ATTCCCTCTCTCTGTTCTTTTCCTTCCTTCTTTCCTTCCTTTTTTCCCTCCATCTC-----------------------------TCCCCCCTTCCTTCCCTTCTTCCTCCCTCTCTTCCTTTCTTCC chr4 - 94230402 92729558 92729557 92729701 1500702 1500701 1500845 144 ccttttttcctcttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC .:...:......----...:..x:.:...x.::....::..:.:x:............x.....::...x..-----------------------------...:..:.:..:..x........:...x.::...:.:...... 12M4I56M29I43M 81/111 73.0% 144/94230402 0.0% 33/111 29.7% -12298260 -81932142 +3119 chr4 + 190214555 80431385 80431384 80431495 111 TTCCTCCC--TCTCTTCCTTTCTTCCTTCCTCCCTCCTTTTTTCCCTTCCTCCCTTCCTTTCTTTGCCTCCCTTTTTGCCTCCCTCACTCCTTCCCTTCTTTCCGTTTCCTCC chr4 - 94230402 84866937 84866936 84867047 9363356 9363355 9363466 111 TTCCTTCCAATTTCATTGTGTCTTCC--CCTTATTATCTTTTACTTTTTTTCTCTCCTGTTATTTAGCTTCCTTTCCATTTCACAGGCTCCTTTCCTACCCTCCATCTTCTCC .....:..--.:..x.:x.x......--...:x:.x::....x.::..::..:..:.:x..x...:x..:.....:::::..x.xx:......:...x.::...:.:.:.... 8M2I16M2D85M 68/109 62.4% 111/94230402 0.0% 4/109 3.7% -4435552 -89794850 +3010 chr4 + 190214555 80431389 80431388 80431441 53 TCCCTCTCTTCCTTTCTTCCTTCCTCCCTCCTTTTTTCCCTTCCTCCCTTCCT chr4 - 94230402 17388732 17388731 17388784 76841619 76841618 76841671 53 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCT .....:..xx:..:...::...:...:.::.............:.x:...... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 63042657 NA +3785 chr4 + 190214555 80447090 80447089 80447157 68 TTCTTTGTTTTTGTTTTTGCTTTTTATTTGTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 26633397 26633396 26633464 67596939 67596938 67597006 68 TTACTTGGTTTTGGTTTTGGTTTCGGTTGGCTTTTTTTCTGTTGGGTTTTTTTTTTTTTTTTTTGAGA ..x:...x.....x.....x...:x:..x.:.......:....xxx...................... 68M 54/68 79.4% 68/94230402 0.0% 0/68 0.0% 53813693 NA +3495 chr4 + 190214555 80450824 80450823 80450932 109 TACTGAAGTACATTCATTGCT----CAAGCAGAGTTAGGCAAGAATTTA----AAAAATAATG---------------GATTAATACCG-TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGCATTT chr4 - 94230402 81628973 81628972 81629104 12601299 12601298 12601430 132 TACTGAGG-ACATCCCTTGCCTGAGCAAGCAAGGTTTCTGAAGTTTTTAGGGTAATAATAACAACCCTATAGTGGACAGAGCAATAGCACTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTT ......:.-....:.x....:----......::...xxxx...xx....----..x.....::---------------..x:....x.:-.x..........:.......x..................:... 8M1D12M4I24M4I10M15I11M1I43M 85/108 78.7% 132/94230402 0.0% 25/108 23.1% -1178149 -93052253 +3118 chr4 + 190214555 80450882 80450881 80450959 78 TAATACCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGCATTTGGGTGTGTGAGAGGAGGGGCCTCTCAA chr4 - 94230402 81629056 81629055 81629133 12601270 12601269 12601347 78 TAGCACTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAA ..::..:x..........:.......x.x...............x.:x..xx:..:.x.:.:x:x.::x.x...x... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% -1178174 -93052228 +3142 chr4 + 190214555 80450887 80450886 80450932 46 CCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGCATTT chr4 - 94230402 18982314 18982313 18982359 75248044 75248043 75248089 46 ctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTT .:.................x.x.x.............::..x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 61468573 NA +3224 chr4 + 190214555 80450892 80450891 80450927 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ..................x................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 61468577 NA +3125 chr4 + 190214555 80450894 80450893 80450927 34 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629097 12601306 12601305 12601339 34 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAG ..........:....................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% -1178170 -93052232 +3277 chr4 + 190214555 80450894 80450893 80450971 78 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGCATTTGGGTGTGTGAGAGGAGGGGCCTCT----CAACAATTTTGTACC chr4 - 94230402 18982315 18982314 18982380 75248023 75248022 75248088 66 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGA----------------GAGAGGAAGGATTTATTTTGTGATAATTTTGTGCC ...............................----------------.......:..:::.x.----::.:........:.. 31M16D16M4I15M 53/62 85.5% 66/94230402 0.0% 20/62 32.3% 61468579 NA +3470 chr4 + 190214555 80458925 80458924 80459009 85 TTGAGACAATTAAAGCTCTTTGCGGATGGGACTTCTTTTTTTTTAATTTTTAATTTTTTAATGAATATCTTTTAGAGAAAGGGTC chr4 - 94230402 9343641 9343640 9343725 84886678 84886677 84886762 85 TTGGTACAGTTTGATTTCTCCTGTGGTGGTAGTGGTTTATTCTTAATTTTTATTTTTTTAATGAATATCTGTTAGAAAATTGATC ...:x...:..x:.x:...::xxx.:...x.x.xx...x..:..........x.................x.....:..xx.:.. 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% 71115284 NA +3960 chr4 + 190214555 80468299 80468298 80468384 86 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCAGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGCCCACCACCACACAT chr4 - 94230402 18197126 18197125 18197209 76033194 76033193 76033277 84 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGTAT ..:..:..:xx:x..:.............x...x.x:.x........::.:...........:....x...--......:::::.. 71M2D13M 61/84 72.6% 84/94230402 0.0% 2/84 2.4% 62271173 NA +3372 chr4 + 190214555 80515910 80515909 80516041 132 ACATGTTAATAATACAAGAAAGA-AGATAGAAAGTACATTGCATATGCATTAATTTAGCGGACCAAAATACAATATCTAGTGGGATGTGTTAGTCTGTTTCTGCATTTCTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 35056030 35056029 35056135 59174268 59174267 59174373 106 ACATATTAGTAAGACAAATAAGACATGTGATCAGTATCTTGCATAG-------------------------ATTATCCAGTGGGATTTGTTTGTTTGTTTCTTTGTT--TTGTTTCATTTTTTTTTTCTGAGA ....:...:...x....:x....-.x:.::xx....:x.......x-------------------------.x....:........x....x..:.......x::..--..x...:x..........:..... 23M1I22M25D36M2D24M 79/105 75.2% 106/94230402 0.0% 28/105 26.7% 45459880 NA +3306 chr4 + 190214555 80558331 80558330 80558384 54 TTTTGTGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTGGCCAGGA chr4 - 94230402 67798838 67798837 67798890 26431513 26431512 26431565 53 TTTTGGAGTTTTTCTGTTTGTTTGTTTGTTT-TCTGGTTTTTTTTTGGAAAGGA .....x:......:.................-.:..x...........xx.... 31M1D22M 46/53 86.8% 53/94230402 0.0% 1/53 1.9% 12759493 NA +3099 chr4 + 190214555 80603387 80603386 80603476 90 TACATATACATACATATATGTACATATATGCCTACACATATATACATGCACACACGCACAAACATATGTGTACATTATAATAGCTATCGC chr4 - 94230402 4481679 4481678 4481767 89748636 89748635 89748724 89 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTAT-CTAGGTATTGC .::..:.::x.x......x..:::.:....:x:...x.:...:....x....:..x.xx.x.:......::.......-x...x...:.. 78M1D11M 59/89 66.3% 89/94230402 0.0% 1/89 1.1% 76121708 NA +3065 chr4 + 190214555 80669050 80669049 80669150 101 TCCTAGGTAT-TTTATATTCTTTGTAGCTCTTGTAAATAAAATTACTTAATTTCTTTTTTCTTTTCTTTTCTTTTCTTTTCTGTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18464657 18464656 18464758 75765645 75765644 75765746 102 TCCTGAGAATGTCCATAGCTCCCACAGCTCCAGTAAATACAATTCTTTTCCGCCTTTTCCCTTTTCTTTTTTTTTTAAATCCTGCTATTTTTCATCCTTTCT ....::.x..-.::...x:::::::.....:x.......x....x:..xx:x:.....::..........:....:xxx..:xx..x.:....x.:...... 10M1I91M 64/101 63.4% 102/94230402 0.0% 1/101 1.0% 62204393 NA +3127 chr4 + 190214555 80669107 80669106 80669176 70 TTCTTTTCTTTTCTTTTCTTTTCTGTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50848206 50848205 50848275 43382128 43382127 43382197 70 TCCTCTTCTCTCTTTTACGTTTCTGTATTTACTTCAAGATTTCTCTGTTTCTTTTTTCTTTTATCTTTTT .:..:....:.::...x.x.......x...x:...xxxx.....:.x...:......:....x.:..... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 29820901 NA +3267 chr4 + 190214555 80724860 80724859 80724948 89 TTCCTTCCTTCTTTCCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTCTCCTTCCTTCCTTC chr4 - 94230402 19053884 19053883 19053972 75176431 75176430 75176519 89 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTC ..........x.::.::x.:xx......:x..:..:.:......xx.:...x:.....:....:..:..:::.x..:.x.x..::x... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 61670976 NA +3140 chr4 + 190214555 80752399 80752398 80752459 61 TATTTATATATATATATACACATATATATAAATAAATATATATATACTATATATATAAAAT chr4 - 94230402 85546032 85546031 85546092 8684311 8684310 8684371 61 TATTTATATATATACACACACAGATACACACATAGAGCTATATGTATTATTTCTGAAAAAT ..............:.:.....x...:.:.x...:.xx.....:..:...x.x.:x..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% -4793633 -89436769 +3069 chr4 + 190214555 80757703 80757702 80757753 51 TTTTGTTTGTTTGTTTGTTTGTTTGGTTTGGTTTTTTTTTCATTTACGCAG chr4 - 94230402 26977586 26977585 26977636 67252767 67252766 67252817 51 TTTTGTTTGTTTGTTTGTTGTTTTGGTTTGGTTTAAATCTTGTTTATGTAG ...................xx.............xxx.:.::....:.:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 53780117 NA +3058 chr4 + 190214555 80784473 80784472 80784537 65 TTGGCCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTTTTCTTTTCTTTCTTTCTTTTTTTGAG chr4 - 94230402 7586125 7586124 7586189 86644214 86644213 86644278 65 TTAGACTTTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTTTCAG ..:.x..:......xx:..:...........:...:....::xx..x:...x..:.......x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 73198348 NA +3105 chr4 + 190214555 80800746 80800745 80800787 42 AGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTATACA chr4 - 94230402 89821280 89821279 89821321 4409082 4409081 4409123 42 AATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .:.........x.x.....................:.:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% -9020534 -85209868 +3154 chr4 + 190214555 80854777 80854776 80854838 62 TTTCTTTTTCTAGCCAAACTCAGCTGTTGCTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAC chr4 - 94230402 3805949 3805948 3806010 90424393 90424392 90424454 62 TTATTTTGTCTGAACATATTAAGATGTTGCTGTGGGAAAAAAAAAAAAAAAAAAGAAATGAC ..x:...x...::x..x.:.x..x.......:..::..................:...x:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 77048828 NA +3211 chr4 + 190214555 80864468 80864467 80864541 74 ACCTATGTGTATACATATATACACATATATATACATATATACCTATATATACGTATATATACATATACGTATAT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:..:...:..:......:.....:.x..........x.x:x...::..::..x.::..:::x...:..:.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 9234336 NA +3262 chr4 + 190214555 80878607 80878606 80878662 56 CCTACTTGTTTTTCTGTTTTTTTCTTTAAAATTTACATTTTACAAGAAAGTATATT chr4 - 94230402 11572191 11572190 11572246 82658157 82658156 82658212 56 CCTAAATGATTTTCTGTTTCTTTCTTTAAAATTCATGTTTTAAAATAAAGTGTGCT ....xx..x..........:.............:.::.....x..x.....:.::. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 69306416 NA +3101 chr4 + 190214555 80883829 80883828 80883877 49 CAATAGTCCACTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTACTTTT chr4 - 94230402 55626416 55626415 55626464 38603939 38603938 38603987 49 CAGTAGTCCATTTGGTGATTTTTTTGTTTGTCTGTTTGTTTTTATTTTT ..:.......:..xx.x:...x.........:............:.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 25257413 NA +3465 chr4 + 190214555 80891773 80891772 80891845 73 AAAATTAAAAAAA-----AAATAAAAAAAAAAATAAAAGCTTTGAGAAGCCCTAGATTAAAGGAAAAAAAAAAAAAAA chr4 - 94230402 6569427 6569426 6569504 87660899 87660898 87660976 78 AGATTTAAAAAAATACCAAATTAAACAAACAAAAAAAAGTCTAGAGAAGCCTCAAATAGGAGGAAAAAAAGAAAAAGA .:.x.........-----..x....x...x...x.....::.x........::.:..x::..........:.....:. 13M5I60M 56/73 76.7% 78/94230402 0.0% 5/73 6.8% 74322346 NA +3016 chr4 + 190214555 80902436 80902435 80902507 72 GTATATATGGATATACATATATACATATATGTATATATGTATATATGTATATATACATATATATGGATATAT chr4 - 94230402 17853470 17853469 17853541 76376862 76376861 76376933 72 GTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTAT ..x......x.:...::....:...x:..xx.x.:....:...:......x.x.:.....:..x:..x:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 63048966 NA +3233 chr4 + 190214555 80924487 80924486 80924544 58 TAATACATAATCGTG-TGACAATTCATTATGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 - 94230402 27034799 27034798 27034857 67195546 67195545 67195604 59 TAAAGTATAAACGTCCTGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATA ...x::....x...x-...x....:.....:.:.:.:...................... 15M1I43M 47/58 81.0% 59/94230402 0.0% 1/58 1.7% 53889688 NA +3036 chr4 + 190214555 80924519 80924518 80924558 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -8896763 -85333639 +3290 chr4 + 190214555 80974609 80974608 80974674 66 CAGTGTATATACATATATATATATATGTCTGTGTACATGTATATATGTGTGTGTATATATATGTGT chr4 - 94230402 19704272 19704271 19704337 74526066 74526065 74526131 66 CAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..:.x..x...........::.....:.:......::.x:..:.:.........:x..x.xx.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 61270337 NA +3583 chr4 + 190214555 80974662 80974661 80974707 46 TATATATATGTGTGTGTGTGTGTGTGTATATATACTTCTTTTCTTT chr4 - 94230402 27034826 27034825 27034871 67195532 67195531 67195577 46 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTT .........:......................:x:........:.. 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 53939836 NA +3176 chr4 + 190214555 80974664 80974663 80974712 49 TATATATGTGTGTGTGTGTGTGTGTATATATACTTCTTTTCTTTTCTTT chr4 - 94230402 27034826 27034825 27034871 67195532 67195531 67195577 46 TATATATATATGTGTGTGTGTGTGTGTATATA---CCTTTCTTTTCCTT .......:.:...............:......---.:.........:.. 32M3D14M 41/46 89.1% 46/94230402 0.0% 3/46 6.5% 53939838 NA +3016 chr4 + 190214555 81029610 81029609 81029650 41 TCACAGTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTGA chr4 - 94230402 47132233 47132232 47132273 47098130 47098129 47098170 41 TCACAGTTGTTGTCTGTTTGTTTGTTTGTTTCTTCTTTTAA ...........x.:.................:..x....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 33897377 NA +3034 chr4 + 190214555 81070647 81070646 81070707 61 GACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATAGCTTTACTCTTTAATCT chr4 - 94230402 62760438 62760437 62760498 31469905 31469904 31469965 61 GGCTTCTTCTCATTTAAAAAAGAAAAAGAGGAAAAAAAAAAAAAGTTTTACTGTTCTATCT .:..:.x.....xxx......:.....:.::.......:...x..:......x..:x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 18310209 NA +6350 chr4 + 190214555 81089706 81089705 81089797 92 TGTCAGAAGTCTTTATCCCAGCCTGATAGCTCATCTGGAGGCATTCCCTTTTCAGGAGGATATTTGTCAAAGTAGCTGTGATCTATGGGTCC chr4 - 94230402 47142636 47142635 47142727 47087676 47087675 47087767 92 TGTCAGAAATCCTTGTCCCAGCCAGAAAGTTCGTCTGGAGGCATTCCCTCTTCAGGTGGATAGCTGTCAAAGTAGCTGTAATCAGTTGGTCC ........:..:..:........x..x..:..:................:......x.....x:...............:...x:.x..... 92M 77/92 83.7% 92/94230402 0.0% 0/92 0.0% 33947070 NA +5383 chr4 + 190214555 81092375 81092374 81092508 134 AAATACAATACCTCTCTTTGCAAAGGTGATGGAAGGCTCCGTGCTTTCAGTCCCTCCCAATTAAAACCATTTAACCACCTGAGAAATGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 47143579 47143578 47143712 47086691 47086690 47086824 134 AAAGCCAATACCTCTCTTTTTAAAGGTGATGCTAATTTCCTCAGTTTCAGACCATCCCAGTTAAAACCATTCAACCACCTGATCAAAAAGAAATGGAAGATGATAGAGACAGAGACCGAGAAAGAGAAACAGAG ...xx..............x:..........xx.:x:...x::x......x..x.....:...........:..........xx..x:.....x.:.:..x.:x..::.x::..:xx.::.:::..:..x::.. 134M 90/134 67.2% 134/94230402 0.0% 0/134 0.0% 33948796 NA +3209 chr4 + 190214555 81104024 81104023 81104124 101 CTGTCATAAGAAAAACAAACAAACAAACAAACAAACAAAAAAACCT----AAAGAATAATAAAGACAGAAGTGGATAAAAAGTTAATTTGCTATGACTTGAAGAT chr4 - 94230402 56666147 56666146 56666251 37564152 37564151 37564256 105 CTATGACCAAAAAACAAAATAAACAAACAAACAAAAAAAAACACCTGCACAGCAAATAATAAAAATGTGCATAAATAAATACTTCAGTTTTTTTTGTTTAAAAAT ..:.x.:x.:....xx...:...............x.....x....----.:x:.........:.::x:x:.::.....x.x..x.x..x:.x.x::..:..:.. 46M4I55M 67/101 66.3% 105/94230402 0.0% 4/101 4.0% 24437877 NA +5519 chr4 + 190214555 81104362 81104361 81104443 82 TTATGTACCTGTGTTTCTTAATGTCATTTATTCCATTCTTCAGATTTCCCAGCCTTTCTGTTGGATTTTGCCTAAAACAATA chr4 - 94230402 47144417 47144416 47144498 47085905 47085904 47085986 82 TCACTTACCTGTGCTTCTTAATGTCATTAATTCCATTCCTCAGATTGCCTAATCTTTCTGTTGGGTTCTGCCTTAAAAAATA .:.:x........:..............x.........:.......x..:.::...........:..:.....x...x.... 82M 68/82 82.9% 82/94230402 0.0% 0/82 0.0% 33959945 NA +9361 chr4 + 190214555 81105792 81105791 81105948 157 GTTACTGACTGTCATTCTCACCTGCAAAGCCTCCGAATCAAATCCTCAGGTCGTCGTGTTATCTTCCTGGGAAAATCCATTTTTTCAATTCCTTTGAGAATCAAATTGTAGGTCATCATTTGGTCAACCCCAGAAAAGGGTGGGCTAGATAGAGAAA chr4 - 94230402 47144803 47144802 47144959 47085444 47085443 47085600 157 GTCACAAAGCATCACTCCTACCTGCAGAGTCTGCGGATCAAATCCTCAGGCCGCCTTGTTATTGTTCTCGGAAAATCCAGCTTTTCAATGCCTTTTAGAATCAAATTATAGGTTGTCATCTGATCAGCCCCAGAGAACGGTGGACTGGAAAAAGAAA ..:..x:.x::...:..::.......:..:..x..:..............:..:.x......:x.:..x..........x:........x.....x...........:.....::....:..:...:.......:..x.....:..:..x.:..... 157M 121/157 77.1% 157/94230402 0.0% 0/157 0.0% 33960989 NA +4159 chr4 + 190214555 81107588 81107587 81107661 74 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAGGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.............x...x.xx.x........::..:........:......x...... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 62910462 NA +11937 chr4 + 190214555 81110429 81110428 81110629 201 AAAACTTGAAG------GTACATACTTGCCCGTTAGGAGCTCATACACTAGAATTCCCAGTGACCAGAAATCCACACTGAAGTCATGTCCCTTGTTGAGAATGACTTCAGGAGCTACATATTCTGGAGTCCCACAGAATGTCCATGTTTTCTGTCCAGACCCTATTTTCTTCGCAAATCCAAAGTCAACCTGGTAAAGAATAGCAAA chr4 - 94230402 47145238 47145237 47145444 47084959 47084958 47085165 207 AGAACTTGGAGTAGGGGGCACTTACCTGCCAGTAAGGAGTTCATACACAAGAATCCCAAGGGACCAAAAATCCACACTGAAGTCATGGCCCTTACTCAGAATGACTTCTGGAGCAACATACTCAGGGGTTCCACAGAACGTCCAGGTTTTCTGCCCTGATCCGATCTTTTTTGCAAATCCAAAATCAACCTGATCAAAACCAATAGA .:......:..------.:..x...:....x..x.....:........x.....:..x..x.....:....................x.....::.x...........x.....x.....:..x..:..:........:.....x........:..x..:..x..:..:..:...........:........:.x..:.x:.::.:. 11M6I190M 160/201 79.6% 207/94230402 0.0% 6/201 3.0% 33965191 NA +10662 chr4 + 190214555 81135149 81135148 81135316 168 TCTTACCAATTTAAGGTAACCCTCAGCATCTAGAATTAAGTTTTCTGGTTTCAAGTCTCTGTAGATAATACCTAGTCGATGCAGGTAATCAAATGCTTCTGTCACACAAGCAACGCAGAATTTGGAGGTGGGTTCATCAAAGCTGCCTCTGCAACGAAATCATTTTCC chr4 - 94230402 47145923 47145922 47146090 47084313 47084312 47084480 168 TCTTACCAATTTTATATACCCTTCAGCATCCAAAATTAAGTTTTCTGGCTTCAAGTCTCTGTAGACAATTCCTATGTGATGTAGATAGTCCAAAGCCTCTGTCACACAGCCAACACAGAACTTTGTAGTGGGTTCATCAAAGCAGCCTCTGAAAGAAAATCATTATCC ............x.x:..x..:........:.:...............:................:...x....xx:....:..:..:..x..x..:...........:x....:.....:..x.x:................x.......x..x:........x... 168M 137/168 81.5% 168/94230402 0.0% 0/168 0.0% 33989226 NA +6895 chr4 + 190214555 81137389 81137388 81137502 114 TTACCTGTCCCTTAATATACTCCAGAGCTCCCCACCTAAGCAGGCCTCCAGAAGCATGTATACATACTTATTGTCCTTGAAAGTACGATATAATCTGTGAAGACAGATAAAAAC chr4 - 94230402 47146914 47146913 47147027 47083376 47083375 47083489 114 TTACCTGTCTCTCAGCAAGCTCCACAACTCCCCACCAAGGCAAGCCTCCAGCAGCATGTACACATACTTACTATCCTTGAATGTGCGATACAGTCTGTAGAGGCAAACAGCAGC .........:..:.::.x:.....x.:.........x.:...:........x........:.........:.:........x..:.....:.:.....::..:..:.:.:x.:. 114M 87/114 76.3% 114/94230402 0.0% 0/114 0.0% 33990475 NA +10536 chr4 + 190214555 81140512 81140511 81140692 181 GGAAGCCAAGTGGTCA-CTTACTTCACAATGAATGGAGAGCACAGCTCCTCTAGGATCCTCTTCTCTGAGTAGACATGCTCCTGCTGCTTGGTGTCAACTATGTGCTTCTTCCTTATACACTTCATAGCAAAAGCAACATTCTCATTTTTTACTTTAACCTATGTAAGAAATGGAAAGATAC chr4 - 94230402 47147134 47147133 47147315 47083088 47083087 47083269 182 GGAAATCTTATGGTCAACTTACTTCACAATGAAAGGAGAACATATCTGCTCAAGGATTTTCTTTTCAGAATATATATGCTCTTGTTGTTTGGTGTCCACTACATGTTTCTTCTTTATACACTTCATAGCAAAAGCCACATTCTCATTTTTTACCTTAACCTGTGAATAAAAATGATGAGTAC ....::.xx:......-................x.....:..:.x..x...x.....::....:..x..:..x.:......:..:..:........x....::..:......:......................x.................:.......:..x.x:...xx..x:::... 16M1I165M 143/181 79.0% 182/94230402 0.0% 1/181 0.6% 33993378 NA +8001 chr4 + 190214555 81142770 81142769 81142921 152 ATGCTTGAAACGTAAACCCCTTACAAGCTCAACTCTTCCGAACCCACCAACGCCCAGTGTTGCAATAATCTCAAGGTTCTGGAATGGGGATGATGAGGAAAATCTGGCCACCTTCTCCTTCAGCTGAATCATTTCCAGAGAGAGTGCTTTGG chr4 - 94230402 47147958 47147957 47148103 47082300 47082299 47082445 146 ATGTTTAAAAC---AAACTCTTACAAGTTCAACCCTTCCGAACCCACCAACACCGAGAGTTGTGACAACTTCTAAATTCTGGAATGGGGAAGAAGGG---AACTGGGCTACTTTCTCCTTCAGCTGTATCATTTCCAAAGACACCTCTTTGG ...:..:....---..x.:........:.....:.................:..x..x....::.:..::..x.::..............x..x.:.---..::x...:..:..............x..........:...x.x:x...... 11M3D83M3D52M 115/146 78.8% 146/94230402 0.0% 6/146 4.1% 33994812 NA +5408 chr4 + 190214555 81148861 81148860 81148971 111 TCCTCCA---ACATCAGTATACTCACTCTCGATCTATAACCAGGCATGCAACATCATTTTCTTCAGCAATAATGTTAGCTGACCTGACATCATCACTGCAA----ACAAAAATAGGAA chr4 - 94230402 47149649 47149648 47149766 47080637 47080636 47080754 118 TCCTTCAGGCACAGCATAATACTTACTCTCTATCTATAACGAGGCACTCCACGTCATATTCATCCGCAATAACATTTGCTGATCTGACATCATCACTAAGAATTGACAGAAATGAGAA ....:..---...x..xx.....:......x.........x.....:x.x..:....x...x..x.......::..x.....:..............:x:.----...:....::... 7M3I91M4I13M 87/111 78.4% 118/94230402 0.0% 7/111 6.3% 33999212 NA +5740 chr4 + 190214555 81151931 81151930 81152059 129 AAAGTATGGCATAT---AATTCA---TGAATTCACCTGATAAGAGCTTTTTCTCCAAAGTATTCTCCTTTCTGCAGTGTTTTTATCAGCTGTGGTTGATCATGGCCTTCTGTGCTCTGTGTTACTTTTACCTAAA chr4 - 94230402 47151335 47151334 47151469 47078934 47078933 47079068 135 AAAATATGATATGTCAGGAATCAGTGTGAACTAACCTAATGAGGGCCTTTTCTCCAAAGTAATCTCCTTTATGCAGATTTTTAATCAGCTGAGGCTGTGAGTGATCTGCAGTACTCTGGGTAACCTTTACCTGGA ...:....::..:.---:.x...---....:.x....:..:..:..:..............x........x.....xx....x........x..:..xxx:..::..x.x..:.....x..x..:.......::. 14M3I6M3I109M 96/129 74.4% 135/94230402 0.0% 6/129 4.7% 34000596 NA +6440 chr4 + 190214555 81153640 81153639 81153743 104 TTACCTTTCCTTTTGCCAAAATGAAAAAGGTACTTCCTTCCTCGCCCTCTCTAATGATGTAATCTCCTTTGTCATAGTATTCCTGTTGGGATG-AGAGAGAAAGA chr4 - 94230402 47152336 47152335 47152440 47077963 47077962 47078067 105 TTACCTTTCCTTTTGCTATTATAAAGAAGGTATTTCCCTCTTCTCCTTCCCGAATAACATAATCTCCTTTGTTATAGTACTCCTGTTGGGAGGAAAAGAGAGAGA ................:.xx..:..:......:....:..:..x..:..:.x...:.::.............:......:...........x.-.:.....:... 93M1I11M 84/104 80.8% 105/94230402 0.0% 1/104 1.0% 34001304 NA +5631 chr4 + 190214555 81167075 81167074 81167243 169 TCTTTTTATTTATTTATGGTGTTAATAATATAAGTACATTCT--AATATCTTCTAA------TGAAATTTATTT---TTTACTTCAAAATTTCTTACCACTTCCAAGCAGTCAATGATCTTGGTTAATTTATCTTCAGGTAAATTCTTCAGCAAGGATACACTTCAAAATTAAAAAGAAA chr4 - 94230402 47152741 47152740 47152920 47077483 47077482 47077662 180 TTTCCCTATTTATTTATGAATTTATTTCTACTATTTCATCCTTCATTATTTTAAAACCTTGCTAAACATTGTTTAGATAAATCTAACAGTATCTTACCACCTCCAGGCAGTCCATGATTTTGGTCAGTTTATCTTCTGGCAAGTTTTTTAAGAGGGACACACTACCAAAAAAAAAAAAAA .:.:::............:xx...x.xx..:x.x.x...:..--.x...:..xx..------.:..xx..:...---.xx.::.x.x.:.x.........:....:......x.....:.....:.:.........x..:..:..:..:.:x.:...:.....x.x...xx.....:... 42M2I12M6I12M3I103M 118/169 69.8% 180/94230402 0.0% 11/169 6.5% 34014334 NA +7657 chr4 + 190214555 81169647 81169646 81169808 162 AATGTATTATTCTTACCTTCTGAGGAAGTTTCTGTATTGTTCATCTCTAGCTTGGGCTGTCCTCCTCATTATATTCTGGAATACCTCTCGATCTAGTGCCCATGTTTTAACATTGGTAATAGCTTT----------AGAAAATTCAAGAAAACAATAAAACACTTAGTACAA chr4 - 94230402 47154153 47154152 47154324 47076079 47076078 47076250 172 AATGAATGATGTTTACCTTCTAAGAAAGTTTCTGTACTGTTCTTGTCTTGTCTGTGCTGTCACTCTCATGATGTTTTGAAACACTTCTCTGTCCAGTGCCCATGTTTTAACATTGGTGATTGCTTTATGCAAACAAAACAAAGACAAACAGACAAACAAAAACCCAGAAAAA ....x..x..x:.........:..:...........:.....x.x...x.::..x......x::.....x..:..:..:..:..:....x:..:.......................:..x.....----------.:x...xx...:x.:....xx...x..::..x.x.. 126M10I36M 121/162 74.7% 172/94230402 0.0% 10/162 6.2% 34015494 NA +7327 chr4 + 190214555 81171688 81171687 81171811 124 TACCTTTCACAGAGGCAGTCCTTGTACAATTGTATAAAATGGCAAGCTCCCCAAATGTGGTCCACATAGGGATGGAGGACAGCAATTTCTCCCCTTGGAACACCTCTAGTCGACCCTCTATCAA chr4 - 94230402 47156172 47156171 47156295 47074108 47074107 47074231 124 TACCTTTCACGGAAGCCGTCCGCGTGCAGTTGTATAAAATGGCCAGTTCACCAAACGCTGTCCACACAGGTATGGAGGAGAGCAGTTTATTCTGCTGGAAGACTTCCAGTCTGCCCTCTGTCAA ..........:..:..x....x:..:..:..............x..:..x.....:.:x.......:...x........x....:...x.:.:x:.....x..:..:....x:......:.... 124M 96/124 77.4% 124/94230402 0.0% 0/124 0.0% 34015516 NA +11652 chr4 + 190214555 81174787 81174786 81175083 297 ACCCACCTGCCAGCACAAAGATATGGTTTCCTGGTTCTCCTTGCTTAATAATGTAACTCCCTTGCTGATAGTTTCTCCCATACATGCATTCCACCATGTCTTTGATCTGCTGAGGATCCAGTCTTTTCAGAAACTGATTTTTATTAAGGGCATCTGTAATGAGCTTCTTCTCACTGGTATAATGGAAAAGAGATGTTAGTTACAATTAATGAAAATCA-------TGTTTTACTATTTAG--ATTCACTTTATTCTGATTCTCAATAATATTATCTACAAACTTATAACTTTCTAGCAAGAACAAC chr4 - 94230402 47157292 47157291 47157574 47072829 47072828 47073111 283 ACTCACCTTTGAGGACAAAAATGTGATTGCCTGGCTCTCCTTGTCTGATGACATAGCTCCCCTGCTGGAAAGTCCTCTCGTACATACATTCCACCATCTCTCGGATCTGCTGAGGTTCCAGTCTCTTCAAAAACTGATTTTTATTCAGGGCATCCGTGATGAGCTTTTTCTCACTGTTTTCAATGGAAAGCAAAGTT-----TAATAGATCAAGACCAGCTGGGTTACATTACTCATCAGGCATTCATTC--------TTCTCAA-AATGTTTCCTCTAA---------TTTCTAACACTGACAAC ..:.....x:x..x.....:..:..:..x.....:........::.:..:.::..:.....:.....:x.:x.:...:.:.....:...........x...:x............x........:....:...............x........:..:........:.........x.x.x.xx.:....x:.x...-----:...x:..x..:.:..-------.::x.....xx.:..--.....:.:--------.......-...:..x:..x:..---------......:..xx:..... 197M5D16M7I15M2I8M8D7M1D14M9D17M 206/274 75.2% 283/94230402 0.0% 32/274 11.7% 34017495 NA +3226 chr4 + 190214555 81189024 81189023 81189092 69 AATAATAATAAAAAAAGAAAAAAAAAAGATTAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 86999920 86999919 86999988 7230415 7230414 7230483 69 AATAAGGTTAAAAAGAAAAAATATAGAGATGTAAAACAACAACAACAAAAAAAAAAAACACAGAAGAAA .....x:x......:.:....x.x.:....xx....x..:..:..x............x.x.:..:... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% -5810896 -88419506 +3180 chr4 + 190214555 81189757 81189756 81189803 47 ATAATAAGAATAATAATAAAAAGAAAAAAAACAGACAGAGAGCCAAA chr4 - 94230402 75135119 75135118 75135165 19095238 19095237 19095284 47 ATAATAATAATAATAGTGAAAAGACAAAAAACAAACAAAAAACCAAA .......x.......:.:......x........:...:.:.:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 6054638 NA +3084 chr4 + 190214555 81203705 81203704 81203771 67 TGCATACACACACATGTGTGCGCACACACACACACACCCCTATACATGAATGCAGAGGCAAGTATTT chr4 - 94230402 89016095 89016094 89016161 5214242 5214241 5214308 67 TGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTT .....:........:..x............::..x.:x.x..:..:.::...::x:x...:::.:.. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% -7812390 -86418012 +17614 chr4 + 190214555 81204582 81204581 81205076 495 CTTACCTGGAGTCTTTTCTGACTCTTGCTTTCTCAAAGGAAAATTCAGGGGGTTTGTTCAGGTCATAGGTCCGGGTTGTTGGCTCAGCAGACACGCCAGCCTTTGCTCCCCTCCTGCTATGGAGAGAGACCAATCCAGAGGTCTTCCGGTGGACCTCAAGAGGCACTTTATCTGGAGAGGCCTGAAGCGGGCTTCCTCCCTGCATATGCACCACATCCTGCAGCTTGTTCAGCTGGATGCACTTGTTCTGGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTGCTTCGACAGCTGCTCCCGCAGCTCCTTCAAATGGTACTCCCGCTCCTGGATCTCAGCATCCTTCCTCCTCAACTCTCTCTCCAGCTCTGTCACCTTGTTCCGCAGAGCATCA-----------------------------------------------GTGGTG-------------------AGGTTCCCAGAGTGTCCATCTGGGTGCTTAGAATGTTTAGGTTTCACTGAACCATTTCCCATTTTGCTCAGGGACCTGAGAAGGCACAGAA chr4 - 94230402 47161469 47161468 47162007 47068396 47068395 47068934 539 CTCACCTGGAATCCTTTCGGACCCTTGATTTTTCAAAGGAAAATCTAGCTTGTTTGCTGGAATCATAGAGCTGTGTTGTTGGCTCTGCAGATACACCCTCCTTAGCTCCTTTCCTCCTGTCAGCAGAGATT------------------TGATTCTTTGGAGTCACTCTAAATGGAGAAGGCTGAAGAGAGTGTTCTCCTTGAGTGTTAATAACATCCTGCAGCTTGTTCAGCTGTATGCACTTGCTCTGAAGTTCCTTGGTGAGTTCTGCGATGACCTTAGTCTGCACAGACAGCTGCTCCTGAAGCTCAGCAACAAGACTTTGACCCTCTTGCAACTCTTCATCTTTTCTTTTCAGCTCCTTTTCCAGTTCAAGCACCCTGCTGCAAAGCACATCAACTTGTCCAGTCACATGGATGCCCAGACCAGGGTCCGTTAGAAACTTATAGTGGCTAGCACAACCAAGAGCTAGGTTTGCTACGTGTCTGTCTGGCTGCCTCAGGTGTTTGTGTTTCATTGATGCATTCCCCATTTTGTCCAGTGACCT----AGGTGCAAAA ..:.......:..:....x...:....x...:............::..xxx.....:.x:::......:x.:.x...........x.....:..:..xx....x.....::....x..:.x::x.....::------------------..:x:..:x:...x....:..xx......:.x......x.:.:x.:....:..x:.:.xx.:x.......................x.........:....:..:....:x........x..:...:..x:.......x:x............:.x.....xx:x.x.x.::x:.xx.x...:..x.x...xx....:..:..::...:...::.:.....:..x:x....:..:.x.:x..x:.....-----------------------------------------------:.:...-------------------.....:x.x:x.....::.....x...:.x:::.....:x......:...xx....:.........::...x.....----...::..:.. 131M18D249M47I6M19I77M4D10M 331/473 70.0% 539/94230402 0.0% 88/473 18.6% 34043113 NA +3118 chr4 + 190214555 81217027 81217026 81217080 54 TTTTGTATATATATATATATATATATATGTGTATATATATAATATAAAACCACA chr4 - 94230402 58870660 58870659 58870713 35359690 35359689 35359743 54 TTTAATGTATGTATATATGTGTACATATGTTTATATATAAAATATCAAATTACA ...x:.:...:.......:.:..:......x........x.....x...::... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 22346367 NA +3200 chr4 + 190214555 81246162 81246161 81246274 113 CTTATTGACTGTATAACTCTGAGCAAGTTACTTAGCCTCTTTGTGCAATAGTTTCCTCATCTGTAAAATGAGTGTGGTTTTAAAGAATAGCTTACCTTGCTGGCCTAAAAGGA chr4 - 94230402 11947207 11947206 11947304 82283099 82283098 82283196 98 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAA---------------TACAATGCTAACCTTGAAGGA ..:.:.:.....:.:..::.::.:x...:.....::..x::....:xx:.......:...x.:.:......x.:.::---------------...xx....::...x:..... 77M15D21M 63/98 64.3% 98/94230402 0.0% 15/98 15.3% 69298955 NA +3302 chr4 + 190214555 81275674 81275673 81275742 69 ATATATATACACACACATATATACACATATAAATATATATATTATATATTATATAATATATATTAATAA chr4 - 94230402 85546037 85546036 85546102 8684301 8684300 8684366 66 ATATATATACACACACAGATACACACATAGAGCTATATGTATTAT---TTCTGAAAAATCTGTTAAGAA .................x...:.......x.:x.....:......---..x.:x..x..x.:....x.. 45M3D21M 53/66 80.3% 66/94230402 0.0% 3/66 4.5% -4270363 -89960039 +3003 chr4 + 190214555 81275705 81275704 81275765 61 AATATATATATTATATATTATATAATATATATTAATAAATATATATTATATATATTATATA chr4 - 94230402 52829209 52829208 52829269 41401134 41401133 41401194 61 AATACATATTATTTATATTATACATTATATAGTAACACACATATATATTATGTACTGTATA ....:....xx.x.........:.x......x...:.x.:......xx...:..:.:.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 28446496 NA +3281 chr4 + 190214555 81307688 81307687 81307734 47 TCAAAAAAAAAAAAAAAAAAAGGAAGAAGAAGAAGAAAAAGAAAAGC chr4 - 94230402 49250047 49250046 49250093 44980310 44980309 44980356 47 TTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGC .:.........:.........:..:.x:.............:..:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 32057641 NA +19881 chr4 + 190214555 81380139 81380138 81380796 658 TTTCCATGAAACATTTGAGGACTAAAAGCCTAATGACAATTCTTTGGCTGAGAATCAAGTAGCTGTCACTTCAATGATTCTGCTGTTTGCTACTATTTTTGTTTGATAAGCAGAACCTTATACTTGGGCCTAG--ATTTGAGGCAAGATCATCAATGATTCATAGTTTGGAGACGGGAAGGCCGCCATCTCCAGGTTGGCCTGTGTTCGGGGTTCTTTGGCAGGAGTATTGTAGATGTTTTCAATTAGGTGAAAAACAAAACCTCTAGAGAGTACGGCTTTAACCCAAATAAAATCACCCCTTGAATATAA--TTTCTCTCTTCCTCCCTTTCTCTTTCTTTCTGTGTATGCATGTGGGGGAGTGTGTATGGGTGCATAAAATGGTTGAGACAGCTGCATTACACAGGTGGTATCCTAGGCAGTAAATAATACAACTTTTATAGATGGCTTGAGACACACAGTCTCAAAACAATTAATTTTACCACTACGCATTTGACCTAAGAGCACTTTTTATCACAGCAGGAATTCCTTATCAAATTCTCAGGTGCAGGTGCCCCATAAACACTTT-GGAGGCATATGGACCTTGTGGCTGAGCTGGCTATTAACTACACAAAACAGTAAGAGGTGGCCTGGGAAGAA-------AGAAAAATATAAAACACCAACC chr4 - 94230402 47303433 47303432 47304041 46926362 46926361 46926970 609 tttCAAGACAATAATCTCAGACAAGAAGCCTA-------TCCCTTGGATGAAGCCCAGAAAACAGTCACCTCAGCAATGCTGATGTTTCCTTCTATTTTCATTCAACAGGAAGAGCTTTATGCTCAGGTGTAAGAAGTTGAGAAACGAGCAGCAGTGATCCATGATTTCAAAGCAAGGGGCCCTCC-CAGACAGGTTGGCTCTCACTTGCACCTCTTTGGCAGCAGTACTGTAGATGTTTTCAATTAGGTGAAAAACAAAGCCTCCAGAGAGCATGCCTTCAGCCTGATAAAAATC-TCCCTTGAGTGTCAACTTTTTGTTTTCCT------------------------GCATCAGG--------------------AAAGTAGTTGAGACAGCTGCTATACACAGGTGGTACTCCA-----TATGTGGTGC---TTTTATGGGTGGCTTGAGGCTCCAAGCCTCTGAACAATTAATTTTACCACTACAGCTTTGACCTATCAGCACTTTTTATCAGTGCAAGAACTCCTTATCAAATCCTCATGTCCAGGTGCAACATAAATACCTTAGGGAGAACATAGGACCTGCAGCAGGTACAGTTGGGAGCAACCTATAGGAGAAAAAGGGGCAATAGAAATAGAAGCAGCAGACAAGAAAAAAAAAACAACC ....x.x:x..:.x.:xx:...x.:.......-------.:.:....x...::x:..::x.:.x.....:...:::..x...x.....x..x.......::..::.:.:.x...:.:....:..::..:x..:--.x.....:x.x..x..x..:....:...::...x:.::.::.::.x..x..-:xxx.........::x:::.:.x:x:..........x....:...............................:....:......:.:.x...:.:..::.xx......-:.......:.:.x.--...:.x.:.....------------------------....xx..--------------------...:.:..............xx.............::.:.-----..x:.::.:.---......:.:.........:.x.xx..:...x:.....................:xx.........xx..............xx...:...:............:....x..x.......xx......:..:..-..::.x.:..:.:x.:..::..x.:xx::.:.:xx.:.x..x:.x.:x..x..:...x.xxx.:.:..x.:-------...x..:x.x....x.x..... 32M7D94M2I51M1D109M1D14M2I13M24D8M20D40M5D10M3D133M1I71M7I22M 413/597 69.2% 609/94230402 0.0% 73/597 12.2% 34076706 NA +3164 chr4 + 190214555 81405517 81405516 81405571 55 ATCCCTTCTTAAAAAAAAAAAAGAAAGAAAAGAGAAAGAGAAAGAAAAAGAAAAA chr4 - 94230402 43002935 43002934 43002989 51227414 51227413 51227468 55 ATTTCTTCTAAAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAGAGGA ..::.....x....:......:.....::...:.....:.....::...::.::. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 38402582 NA +3088 chr4 + 190214555 81405531 81405530 81405611 81 AAAAAAAAGAAAGAAAAGAGAAAGAGAAAGAAAAAGAAAAAGGAAAAGAAAGAAAGAAGGAAAGAAAGTAAAGAAAAAGAA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA .:...:.xx.:::....:.....:..........x.:.x:..x........:x.x::.x....x:.:xx..x:........ 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 11151709 NA +3623 chr4 + 190214555 81405534 81405533 81405622 89 AAAAAGAAAGAAAAGAGA----AAGAGAAAGAAAAAGAAAAAGGAAAAGAAAGAAAGAAGGAAAGAAAGTAAAGAAAAAGAAGAGGAAAAATA chr4 - 94230402 56098454 56098453 56098544 38131859 38131858 38131949 91 AAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAG--AGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTA ...x....:...x.....----..:..x.:...:..:............x...--..::..:..:.....x....:..xxx.:.:.:...x.. 18M4I31M2D38M 65/87 74.7% 91/94230402 0.0% 6/87 6.9% 25307080 NA +3831 chr4 + 190214555 81409952 81409951 81410098 147 ATTCTTTTGCTGA---AGACTTCTCTTTCTTTCTCCTCTTTCTTTCT-----------TTCTCTTCT----------TTCTTTCTTCTTTCTCTCCTTCCTTCCTTCCTTGTTCTTTCCTTCCTTCCTTTTCTTTTCTTCTTTCTTTTCTCTTTTCTTTTCTTTTTCTTTC chr4 - 94230402 92912817 92912816 92912986 1317417 1317416 1317586 170 ATTGTTTTGCTAAGACAGACT-CTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTC ...x.......:.---.....-...:..xx:......:..:.x...:-----------...::....----------.....:.:x...x:x...::..:.:...:...:x.xx:.:x:....x::::.:x:...xx:.x..............:......:..:.:::.. 13M3I5M1D25M11I9M10I94M 97/146 66.4% 170/94230402 0.0% 25/146 17.1% -11502865 -82727537 +3577 chr4 + 190214555 81409995 81409994 81410060 66 TTTCTCTTCTTTCTTTCTTCTTTCTCTCCTTCCTTCCTTCCTTGTTCTTTCCTTCCTTCCTTTTCT chr4 - 94230402 72861131 72861130 72861196 21369207 21369206 21369272 66 TTTCTCTTCTTGCTTCCTATTTTTTTCCCTAATTTTGTTCCTTTTTCTTTGCCTCCTTCCTCTTCT ...........x...:..x:...:.::...xx:..:x......x......x.:........:.... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 8548864 NA +6219 chr4 + 190214555 81432289 81432288 81432422 134 TGAGACCCACCTTAAAGACTTCCATCTGTCTTTCTCTATATGATTTTCAGGTCCTTCACTCTCATAAGAAGCCAAGTAGAGAGCTACAATCAAACAAAAGAAAGTGCATTAACATTAAAGCCTTCTCCTGATAT chr4 - 94230402 47176656 47176655 47176780 47053623 47053622 47053747 125 TGACACAAACCTCAGAGTCTTCCATCTGTCCTTCTCAATGTGATTCTCAGGACTTTCACTCTCATAGGAAGCCAAGTAAAGTGCTGCAAT----CACAAGCAAATACAATAA-GTTAAA----TCTACTGGCAT ...x..xx....:.:..x............:.....x..:.....:.....x.:............:...........:..x...:....----..x...x..:.:..x...-:.....----...x...::.. 90M4D18M1D6M4D11M 100/125 80.0% 125/94230402 0.0% 9/125 7.2% 34255633 NA +10556 chr4 + 190214555 81433834 81433833 81433995 162 CCTTACCATCTTCACTGAAGACTGGTACTGTGAGCAGATACTGCAAGATCTTCCGGTCCCTCTCAAATGGACACTCCACTTGTTTCCATGTCATAAATTCACTCACTTGTTTGGCCAGTTCCCAAAATTTCTGGAAGATAAGTAAAAAAAGAATATAAAGGT chr4 - 94230402 47177413 47177412 47177570 47052833 47052832 47052990 158 CCTTACCATCATCACTAAAGACTGGGATAGTGAGCAAATACTGCAGAATCTTCCGATCCCTTTCAAATGGACACTCCACTTGCTTCCATGTCATAAATTCACTGACTTGTTTTGCCAATTCCCAAAACTTCTGCCAG---AGTAGAACAGGAA-ACAAAGAT ..........x.....:........x.:x.......:........::........:.....:....................:....................x........x....:.........:.....xx..---....:..x.:...-.:....:. 137M3D13M1D8M 136/158 86.1% 158/94230402 0.0% 4/158 2.5% 34256421 NA +9004 chr4 + 190214555 81434633 81434632 81434766 134 ACTCACCTCAAAATTGACATGGCCATTGGGAAGGCGGTTGGCACAACCCTCATTGAGGAAATAAATATCTTTGATTAAGAGACTGAAGAATGGTATCACAATCTAGAGGAAACAAAAGATTCTGGTTGGTCTGG chr4 - 94230402 47178868 47178867 47179001 47051402 47051401 47051535 134 ACTTACCTCAAAATTGACATGACCGTTTGGAAGACGATTGGCACAGCCTTCATTGAGGAAGTAAATATCTTTGATCAAGAGGCTGAAGAACGGTATCACAATCTAAGGAAAGAACAAAATTACTCTCAGTCTGG ...:.................:..:..x.....:..:........:..:...........:..............:.....:........:..............::.:..:x.x..:...x:xx.::...... 134M 109/134 81.3% 134/94230402 0.0% 0/134 0.0% 34255765 NA +3128 chr4 + 190214555 81435412 81435411 81435490 79 CCTCTCAAAAAAAAAAAAAAAAAAAAAGAATACCTATCATTGCAGGCACCGATTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 72310657 72310656 72310727 21919676 21919675 21919746 71 CCTCTCAAAAAAAAAAAAAAAGAAAAAGGATACTTATATTT--------CAACCTCTTTATACAGGCTTTTTGTTGAGA .....................:......:....:...xx..--------.:.::.:...x.x:xxx:.....x...... 41M8D30M 54/71 76.1% 71/94230402 0.0% 8/71 11.3% 9124755 NA +7491 chr4 + 190214555 81440829 81440828 81440954 126 CATACCTTTTCTCTACTACTATGAGCAGTTAAAGACCTTTGTGCTGCCCCACGAAGAGCTGTTCGATAATTATAGAAATTGCTTGAAGGGTCCATCTGATGCTATAGATAAAAGAGAGAAGAATAT chr4 - 94230402 47180250 47180249 47180375 47050028 47050027 47050153 126 CATACCTTCTCTCTGCTGCTATGAGCTGTCAAGGACCTTTGGGTGGCTCCACGCAGAGCAGTCCGGTAATTATAAAAATTGCTAGAAGGGTCCATCTGATGCTACAAAGCATGAAGAAATGTAAAT ........:.....:..:........x..:..:........x.:x..:.....x.....x..:..:........:........x....................:.:.xx.x::...:.x.x.x.. 126M 99/126 78.6% 126/94230402 0.0% 0/126 0.0% 34260579 NA +6675 chr4 + 190214555 81442278 81442277 81442378 101 AAACATCAGCTTCACATACCTCAAGAATGTCAAATTTTGCAGTCTTCACTTTGGCCCAAGTTTTTTTTAGTCGAGAGACTGGGCTCATATTCATACCAGCT chr4 - 94230402 47182113 47182112 47182213 47048190 47048189 47048290 101 AAGTATTGGTTGAACTTACCTCAAGAATATCAAATTTGGCAGTCTTCACTTTTGCCCATGTTTTCTTTAATCGAGAGACAGGACTCATGTTCATGCCAGCT ..::..::.:.xx..x............:........x..............x.....x.....:....:.........x..:.....:.....:...... 101M 83/101 82.2% 101/94230402 0.0% 0/101 0.0% 34260165 NA +12083 chr4 + 190214555 81445518 81445517 81445850 333 ATACTCACAGATTATCGCCATCAAGGAGTTGAAGTTGCCAATGTTAAAACACTCCCGAGCTACGTCAATGAAATACTCAATCATTCTTGCTCGGTGTTTTTTCTTAACAGGCTACA------------------------CAGTAAAAGACAAT---------------AGAGGGCAGTTATCCAGT--------ATGAAGGCCCAACAGTTCTAAAATA-------AGTATGAAAAA----ATAATGTTGAGAACTAGGAGACAGAAAATT-------------CATTTCCTCACCATACAGATTTCTGTAGCAACCAAGTAGCTGAGGCGATTAAACCATTCCACGTAAGCTTCTAAGTTTCGTGTTTTCTTCCGTTCACTGTAGCAACTCTTTAGAGAAAA chr4 - 94230402 47182896 47182895 47183295 47047108 47047107 47047507 400 ATACTTACAAATAATAGCCATTAAGGAGTTAAAGTTCCCAATGTTAAAACATTCCCGTGCCACATCAATGAAATATTCTATCACTCTTGCTCTGTGCTTCTTTTTCACGGGCTGCAAGAAATGCACGTGCTTGTGATTCTTAGCAGGAAACAGTACTAACACAGACCCAAAAGAAACAACACCCATTCCTGTCCCAGGAAGAGCTAAT-GCACTATAACATCACCACAGCAAAAAAGACTCCACAGTTTTTATGATT---AAACAAAACATTTTAGCAGAAGTAGTCCTTGCTCACCATACAGATTTCTGTTGCAACCAAGTAACTGAGCCTGTTAAACCATTCCACATATGCTTCCAGGTTACGGCTCTTCTTTCGATCTCCGTAGCAGCTCTGCAGAGGAAA .....:...:..x..x.....:........:.....x..............:.....x..:..:...........:..x....:........x...:..:..:..x..:....:..------------------------:..:.::.:...:.---------------.:..::xx:x:.:...x.--------.x....:x.:..:-.:x...x..:.-------..:.x:...:.----.:.:.x..x.x:.:.---.:...:..x...-------------:x:..x....................x...........:.....x.x:..............:..x.....:.:...x..xx.:.....:..x..x.:......:....x:....:... 116M24I14M15I18M8I13M1D11M7I11M4I15M3D12M13I119M 244/329 74.2% 400/94230402 0.0% 75/329 22.8% 34262622 NA +7015 chr4 + 190214555 81447448 81447447 81447635 188 TAGACTGATAAATCCCATTTTTGGTTTCAGTGCTGACCTTTGGGTAGACTGATTACCTTGTCATTATCCAAAGGGTCCTTCTGCACGAACGCCTGAACAAATTCTTCTGGCCCAATATAATTGAGCCTCTCCTGAA------ACACAAACCCAGAAG-----------GTCAAC-AGTATT---AAAGAAAATGAAAAGAAATGGACTG chr4 - 94230402 47184376 47184375 47184577 47045826 47045825 47046027 202 TAGGATGTTAAATGTCAC-----GTTTCAGAGCTG--CTGCAGATCTCCAAATTACCTTGTCATTATCCAAAGGATCCTTTTGTACAAAAGCCTGGACAAATTCTTCTGGCCCGATATAATTAAGTCTTTCCTAAATAAAGCACACAAGCAATCAAGTCAGATCCTCCGTTAACTTGTATTTCAAAAGAAAAAGAATAAAACCACACTG ...:x..x.....x:..:-----.......x....--..x::.:.xxx.x:.......................:.....:..:..:..x.....:.................:........:..:..:....:..------......:.xxxx...-----------..:...-x.....---........x...x.:..x::x.... 18M5D12M2D99M6I15M11I6M1I6M3I25M 140/181 77.3% 202/94230402 0.0% 28/181 15.5% 34263072 NA +12802 chr4 + 190214555 81448064 81448063 81448284 221 CTTACCAGCTCTATATGAGTCAGCTGCTGGGCCAACGTGTAAGGGTCGTTGCAGACAGTAATGATATCCCTTTGTATAGACTGTGGCTTGGTCTTGAGAACTGTGAGCCGATCTGTGGATGTGGAGCTGATTTTTGCCAGGACTTCTTCGTACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTTGCTGGACATTCTTTCTGTATGTCTG chr4 - 94230402 47184591 47184590 47184811 47045592 47045591 47045812 221 CTCACGAGCTCTATGTGTGTCAGCTGCTGAGCTAATGTGTAGGGATCATTGCAGACAGTGATTATGTCCCTCTGGATGGACTGTGGCTTGGTCTTTAGGACTGTGAGGCGATCTGTGGACGTTGCATTGATTTTTGCAAGTACTTCCTCATACTGGCTAACAGTTGCGAGCTTTCGAAGCAGGTTCTGGAGGAGCTGCTGGACGTTCTTCCGATACATCTG ..:..x........:..x...........:..:..:.....:..:..:...........:..x..:.....:..x..:.................x..:........x...........:..x.x::..........x..x.....:..:........:.xx.:x..:.....x..:.x...::x...x.xx.x:........:.....:.x:..::.... 221M 170/221 76.9% 221/94230402 0.0% 0/221 0.0% 34263473 NA +3205 chr4 + 190214555 81451069 81451068 81451162 94 ATCGCTTCTCACCCTTTTGGCTAAGATCAAGTGCAGAGTAGAAAATACATGTTACAAAGTTGAAGTTTCACAGTCAGT-AAAGCCTGTTTACAAG chr4 - 94230402 56292881 56292880 56292964 37937439 37937438 37937522 84 ATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAGTGTAG-----------TGTAAGCTTATAGCTAAACAGACAACAAAAGTATTTCTACAGG ..:.......::.....................:..x....-----------.::..:x..:x..:.xx....x..::-....:x.x.:....:. 41M11D26M1I16M 61/83 73.5% 84/94230402 0.0% 12/83 14.5% 25158188 NA +10260 chr4 + 190214555 81456639 81456638 81457666 1028 CAGGTTACCAACCTCTTCGCCACTGGCTATTCGGTGAGCCAGATCTTTTAAGTTTCTCATCATTCTTTCATCCCGAAAATCATAGGGAAATGTTTCCGTCCATTCCGTGAGGAGTTGAAGGATTTTGGGTGCAATTTTTCTCATCTGGTTCTAG-------------------------GGAGAAATAGCAA----------ATCTAATTC------AGTGATATTTATCACTATGGACTACATCAAATCA-ATAGTTACAAAGAGCGTCACTGAGAAACTTCTAGTGC------AAAGTCTTTAGGGATGAAGAAGAAGCTCCAGCCCCCCTCCCTCCATGTCAATGCCAAG--TGCCACCAACTTAAGGCAGGACCTAGGGATTCTCCATTGCATTTAATTAATTT--ATTTTTTAAAATTTTTAAATTTTTAATGTCTTTTATTTTTGAGACAGAGTCTCACTCTGTCTCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTGC-CTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGGGTAGCTGGGATTACAGGCATGCGCCACCAGGGCCAG------------CTAATTTTTG-TATTTTC----AGTAGAGGTGGGGTTTCACACGTTGGCCAGGCTGGTCTC----------------------------------AAAACTCCTGACC--TCAGGTGATCCACCCACCCTGGC--CTCCCAAAGTGCTGGGATTACAG-GCGTGAGCCAGTG---CACCCGAAC-TGCATTTGATTTATCCTGTGTTCTTTAT----TCTTTATACCATTCACAATTCCCCTTGT----------------------------------------ATAGCCATGA-TGCCATTTATGCACTTCAGCCTGGGGATAAGCCAGGGTTACTTAAGGAACCAACTTCACAA-AATCTAAGCCATAAAGTAAGCATTCCTAATAAA----------------ACAAATT------GTAATGTACCATTACCTTATCACTATCAGGATCACTTAGTCTCTGGTGCTCAACACATAAGTGGCAAACTTTGGCCATTAGCTCATACGGATGCATAAATAACCGAGAACTGAGTAGGAAGGTAAATATGTATGTTCTCTGC-AGCAACAGAAAA--------------AAGTCATCATCGTTACATTCTCTCTGAAA chr4 - 94230402 47187913 47187912 47189097 47041306 47041305 47042490 1185 CAGGCATCTTACCTCATCACCACTGGTTATTCTTTGTGCCAACTCCTTTAAGTTTCTCATCATTCTTTCATCTCGAAAATCATAAGGAAATGTCTCTGTCCATTCTGTCAAGAGCTGCAGGATTTTGGGAGCTATTTTTCGTATTCGGTTCTAGTTGAAAGTACAAAAGGAGAGCATAATGAGGAAGAGCAATACACAACACAGCTAACACAAAAGAAATAGAATTCCTTTCTGCAGAATACAACAGAGGGTAAAGCTATGAAG---GTCAGTT---AATTTTTTAAGCTTAACTTAAATCTTCAT---TGGATTACAGGCCAGAGTCAATACCCATTAAGGCCAATGAAAAGACTCTCATTGGCTTAA---ATGGGCTAGAAATTA------GGTCTCAGGTAACTGGAAAATCTTAGAATATCTATATCCACGTTTTCCCTTCATTATTAGA------------ATGTCACACAGCAAGACATACGTTAGTGGTTCTGTAATTTATGGCTATCAACTCTCAAAGCTTTAAGCATCATTTACCGCTTATGTACGTACGTACAGTAAATCATAG---CGAAAAACTGGGGCAAGGATTCAAGTAACTTAATTTACGTTATTTTCTACTGGCAAAGAGGCTCTATGACAACATCCACATTCTGTTTCCTTTTCACTATATACCGTATGAATGCACAGAAAAGAAAATGCATTCCCATGCAAGTGG-CCAGCAAGCTAAGCCACTCCACAAAGACTGAGACAAGAATGCACACGTCAGTGAAACACCCATTCATGCGCTTAATTCATTGTTGCCTCTTTGCAACATTTTGACACCACACATTAATACGTTTGGAACACTGAAACAAAAGCAAGCATTGCAGAGTGTGCCATTAATTGCCATCACTTTTATTTCTGTCCCTCGTATTGGTAAAATGAAAAG--TGCAGCAGCAGCAATATGCAGGATGGTCTGAACAGT---GTGGAGATTTCCCACAAATGTTAGTGAGTGAAGGTCACATTCTCAGAGTGAGTGATTATTACCTTGTCCTGGACAGGCTCACTTAGTCTCTGTTGCTCAATGCACAGATGGCAAACTTTGGCCATAAGCTCATAGGGATGCATGAACAAGCGTGAACTGAGAAGGAAGGTGAAGATGTATGTCCTCTGCAAACAAGAGAAAGACAGATCAAGAGGCAAATCACCATCATTTTATGTTTTCTCAAA ....:xx.:x.....x..:.......:.....xx..x....:x..:..........................:...........:........:..:........:..x.:...:..x...........x..x.......x:..::........-------------------------x...:..x.....----------.x....:x.------.:.::x...:x.:x..:::..x....x..:.xx:-.x..:..::...---....x.x---..:..:.x:x..------x..:....:.x---..:.xx.x.:..:xx..:.xx:x:..x.:x.x.:.....xx...--.x:..::::.....---.x.:x....::...x------.xx:.:.:x...:.x--.xx.:...:...x.:..x..::x::x.x..::..xx..x.x...------------x....x.x...xxx.:x:.:.:x.:...xxx::x:.::.:.:x..x.:.x:.-...xx..x..:....:x:x:.:x:xx..:.xx:x.x.:x...xxxx::..:.:..---:.x:xx..::....x..------------:......x:.-.......----:.:.:..:x.xxx.x.x...xxx.xxx..xx...x.::.----------------------------------....:x.x.xx..--x..:...:-...x.x.x.:x:..--....xx..:x:...:..:x.x.:-..:::x.:.....---.....:xx.-...::..:...:..:x.xxx:.....::----.:..x.:....:x..:x.x.x.x:...x----------------------------------------..x.....x.-.x::....x..:x.:..:xx:...x:.x.x.xx.:.--.:.xxx..x.:.x.xx.x..x:.-::...:.:.x:.---..:::x...:.:x.:...----------------x..x...------..:.xxx.::........:..x:x:x....x..............x.......::..:.::.................x........x........:..:..x..x........x........:..x........:......-.:...x.....:--------------..:...:....:..x:..x:.:...x... 154M25I13M10I9M6I34M1I12M3D7M3D12M6I11M3D44M2I14M3D15M6D15M2I44M12D52M1I55M3D17M12I10M1I7M4I39M34I13M2I8M1D14M2I23M1I13M3I9M1I28M4I28M40I10M1I36M2D23M1I12M3D18M16I7M6I142M1I12M14I29M 625/989 63.2% 1185/94230402 0.0% 235/989 23.8% 34268726 NA +13203 chr4 + 190214555 81459281 81459280 81459523 243 CAATTTCTACTCATTGCCAAGGATGTGTT-TCAGAGAAACAT-GAATACCTACATCTGGATAGTAATCCACATTAGGTACTAAGTGCTGGATGAGTGCTTCCAGGGATCCAGAGAGGAGGTTGTTGTCATGGTAATACAACCCTCCACAGCTGTCCTCTGCAGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATTGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTAAAAGGA chr4 - 94230402 47190051 47190050 47190295 47040108 47040107 47040352 245 CAGTTTCTGTTGATTCTGAACAATGTGGTGCCAGTGCAATATCTCATACTTACATCAGGATAATAATCTACACTGGGCACTAAATGCTGGATCAGAGCTTCCAGAGACCCTGACAAGAGGTTGTTATCGTGGTAATAGAGTCCTCCACAGCCATCCTCTTTTGACTGATACAGATTCCTGTTGTAGCCGCTGCTGTCAAACATTGCTGCAAAGGGAGGTGTCTGTGGCATCCTTTCCTAGAGAGA ..:.....::.x...x:x..x:.....x.-:...x.x..:..-xx....:......x.....:.....:...:.:..:.....:........x..x........:..:..x..x.:.........:..:........x.::..........::......x:x........x..:..:.x:.....:..:...................x.........x.....x.....x........:.::.. 29M1I12M1I202M 188/243 77.4% 245/94230402 0.0% 2/243 0.8% 34269230 NA +15094 chr4 + 190214555 81460087 81460086 81460625 539 CACTGAAAGATCAGATGCTGTTGATTTTCTCCCCTTTGTGTTAAATTCTCCTGGGGCTGTGGGGTGGTATCTGTAAAGCCTCAGTTCTCAATAAACATGCAGGCTGAGAAGACACCTGATTTGGGAGCAAGGAGCACTGTGACAGTCCTGAGATAAGTTGCTCCTCTCCATCTGTGTACTTTGCAGTTCACAA---AGGCCTTGTCAGAGGGTGCTCTGCAGAGGCCAGAGGCTATTAAGTTATTACTTGAATTCCTAGGGACGGCACCCGGCCCTGAGAAC---AGACTCCCAGTCTCTGGCACCACGTCTGCACAATGGAGGCATTGAAGAGCTGCA-GAGACTGGGGGCTTCAGAAGGCAAACAATGAAGGGGAGCCATACTCCAAGCTACGGACTGACAGGGACAGGGTGTGTGGAGGCAGCAGAA--------GGACATAACCTGGACTAATCTTTCTTTTTAAGATGCCAAAAGATATTTGCATCTCAATGTGGGAGGGGTGTGGAGCCCTGTCT---AAGTCACATCCATCACTCCTTGAGCATCTGTTC chr4 - 94230402 47190484 47190483 47190997 47039406 47039405 47039919 514 CATTGTGAGTGCAGATGCTGTTGCTTTTCTCTCCATTGTACCAAATCCT-----GTTTGTGGAAAAGGTTCTCTAAAGCTGCAGACCTCAGCAAACCT-CACTCTGTAAAGGCACCCAATTCTGAGAATAACCTCAATGTGACAGCCTGGAGATAAGCAGCACTCTGCCATCTGTGTGCTCC-CAGCTCACAACAAAGCACTTTGCAGAGAGAGCTGGGTAGGGACGAGAAGCTATTAAGTTATTAGCTGGATTCCTGGGGA-----------CCTGAGTGCCAAAGCCTCCCTGCTGCTGGCAGCGTGGCTACACAACCGAGGCATT-CAGAGCAGCACAAGACCAAGGGATTCGGTGAGTAAACAATAAGGGAAAGCCAAACTC--AGCT--------GCAAGGGCAGAGAGAGGGATGGGAGCAGAGCTCCTGCCCTGCATGACCCGCACTAATC-CGCTTCGCAAGATGCCAACAGAGATTTGCATCAGAATCAGAGAGTG-----------TGTCTGAAAAGTCACATTAGTCACT--GTGTGCAGCTGTTC ..:..x:..xx............x.......:..x....:::....:..-----.x:.....::x:.xx...x......:x...x:....::....x.-..xx...x:...:....::...:x.:::xx.:xxx..x........:.:x........:x..x.:::x..........:..::-...:......---..xx...xx.....:.x...xx.:..:.:.x...:...............x:..:......:....-----------......x:.---..x.....x.::x......x.::.x..:.....:x........-x.....x...-:....:::...x...:.x::.:.......:.:..::.....x....--....--------:..:..:...:.x.x.x.:x..x......:--------xx:...:...:.x.......-:x...:x:..........x...x.........xx...xx.:...x.-----------.....---.........:x:.....--x..x...x...... 49M5D44M1D83M1D10M3I66M11D9M3I43M1D10M1I46M2D4M8D30M8I20M1D46M11D5M3I17M2D14M 351/496 70.8% 514/94230402 0.0% 61/496 12.3% 34269603 NA +3023 chr4 + 190214555 81465086 81465085 81465124 39 AAAAAAAAAAAAAAGAAAGAAAGAAATCAAGGAATTCTT chr4 - 94230402 62352963 62352962 62353001 31877402 31877401 31877440 39 AAAAAAAAAAAAAAGAAAGAAAGAAACCAAGTAATTTCT ..........................:....x....::. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 19112123 NA +3158 chr4 + 190214555 81466866 81466865 81466979 114 ACGTCCTAAATCAGAGATTTCTAACAGCATCTCTGGAAACTGCAGAAATGCTACACCTCTGCTTACCTCCTTAAAAAAAAAAAAAAAAAAGAAAAAAAAGGTATTGTATTGAGA chr4 - 94230402 30672649 30672648 30672754 63557649 63557648 63557754 106 ACATTCAGATTTAGTGACTTC---CATCTTCTCTGTAACTCTTAA-----CTATACCTCTCTCCTCTTCCCTGGAGAAAAAAAAAAAAAAGAAAAAATTTGTCTTACATTGGAA ..:.:.x:.x.:..x..:...---..x.x......x..x::x:.:-----...:......x:::x.:...:.::.:.....................xxx..x..::....::. 21M3D21M5D64M 70/106 66.0% 106/94230402 0.0% 8/106 7.5% 50794217 NA +3089 chr4 + 190214555 81469601 81469600 81469668 68 ATTTAGTTATACATATAAATACATATGTATATATGTACATATATGTGTATATATACACACACACACAC chr4 - 94230402 25393242 25393241 25393308 68837095 68837094 68837161 67 ATTAAGTTCTG-ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x....x.:-...x....:::.:::.:.:......::...x.....:..:.:........:..... 11M1D56M 48/67 71.6% 67/94230402 0.0% 1/67 1.5% 56076359 NA +3348 chr4 + 190214555 81469608 81469607 81469682 75 TATACATATAAATACATATGTATATATGTACATATATGTGTATATATACACACACACACACACACATATAAATAA chr4 - 94230402 8395793 8395792 8395867 85834536 85834535 85834610 75 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .:..::.:.:x...x.:......x..::..::...::x.::..xx...................x.:.:....:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 73073815 NA +3573 chr4 + 190214555 81469608 81469607 81469682 75 TATACATATAAATACATATGTATATATGTACATATATGTGTATATATACACACACACACACACACATATAAATAA chr4 - 94230402 8395797 8395796 8395871 85834532 85834531 85834606 75 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA .:.::::.....:.::...x..:.......:::x..::.xx...:.:.............x.....x..:..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 73073811 NA +3050 chr4 + 190214555 81469618 81469617 81469688 71 AATACATATGTATATATGTACATATATGTGTATATATACACACACACACACACACATATAAATAATCTATT chr4 - 94230402 53319061 53319060 53319131 40911272 40911271 40911342 71 AATACTTTGGTGTTTATCACCATTTGTATGTGTGTAAACACACACACACAAATACATATAGATGTTCAATT .....x.xx..:.x...xxx...x.:.:...:.:..x.............x.:.......:..:x..x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 28150557 NA +3125 chr4 + 190214555 81469620 81469619 81469677 58 TACATATGTATATATGTACATATATGTGTATATATACACACACACACACACACATATA chr4 - 94230402 88147180 88147179 88147236 6083167 6083166 6083223 57 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATA .....:.:x:x....:..:........x.:.:...:.:.............-...... 51M1D6M 45/57 78.9% 57/94230402 0.0% 1/57 1.8% -6677560 -87552842 +3218 chr4 + 190214555 81469644 81469643 81469697 54 TGTGTATATATACACACACACACACACACATATAAATAATCTATTAGATGCTAA chr4 - 94230402 21704674 21704673 21704727 72525676 72525675 72525729 54 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAA .:.:.....:...................:.:..x.x...x..x......:x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 59764970 NA +3218 chr4 + 190214555 81469644 81469643 81469697 54 TGTGTATATATACACACACACACACACACATATAAATAATCTATTAGATGCTAA chr4 - 94230402 21701101 21701100 21701154 72529249 72529248 72529302 54 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAA .:.:.....:...................:.:..x.x...x..x......:x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 59768543 NA +3284 chr4 + 190214555 81496413 81496412 81496516 104 ATTCATTTAATCCTCGTAA---CTGTATGAGGTGAGTTCTC-TTATTATCTTTATTCTGCAAATGAAGAAACTGAGACACAGAGAGGTTAAGGAACATGTCCAAGATC chr4 - 94230402 10729156 10729155 10729262 83501141 83501140 83501247 107 ATTGATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...x.....:-....::..---.:x.:......::..xx.:-:...:.x..::...:.:..::..:::........:....x.x........x..:x..:...:::.. 10M1D8M3I19M1I66M 69/103 67.0% 107/94230402 0.0% 5/103 4.9% 70767257 NA +3538 chr4 + 190214555 81497096 81497095 81497178 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTTATGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGTACTTACCATCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:...........:.x...x:.x.x........:.::.........:.:....x..:.--....:::.. 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 63299970 NA +12957 chr4 + 190214555 81499846 81499845 81500056 211 CACCCTTTTTTTTTTTCCCTTGGCTTCCTTCTTTCAGCATGACATCCTCTCAAACGCTACCTGACAGACTGCTGCAATCACCCTGTGAAT-GTAAGTAATTTCCTTATTGACAGCCTCCCATTCTCTCTGACATCTGCCAGCACTCCCTGACACTTGAATAAGCATTAAGACATTAACAGTCTGGCACAGGTTTAAGGGCTGGAATAGTAAT chr4 - 94230402 47203444 47203443 47203650 47026753 47026752 47026959 207 CACCCTCTCTTGCCTCCACCC--CTTTCTCCTTTCAGC-TGCCATCCTCTCCATC-CCACCTGACAGCCTGCAGCCATCACCCTGTGAATAGTAAGTCATTTCCTCATTGACAGCCTCCCATTTACTCTGACATCTGTCAGCCCTCCCTGACACTTGAATAAGCATCAAGACATTAACAGTCTGGCACGGGTTT-AGGGTTGGAATAATAAT ......:.:..x::.:.x.::--...:..:........-..x.........x.x.-.:.........x....x..x..............-......x.......:.................:x............:....x.......................:.....................:.....-....:.......:.... 21M2D15M1D16M1D34M1I103M1D17M 178/206 86.4% 207/94230402 0.0% 6/206 2.9% 34296402 NA +8793 chr4 + 190214555 81520024 81520023 81520540 517 TCAACATACAGCTGTGATTTAGCTACCAGTGCATTTCTGAAAATTGCTTCCTTAGCATT-TCAGCGTGTT---------------------------ATTTGAAAGAGCAACTGAAGTAGAAAGAAAA-TCAAGCAACAACAGGAGGGACTCGTTTTTAAACTCATTACTTTGCAAGCTGAAAAATTTGCTTAGATCAGTTGGGGTTTCAAATGTAAAAATTGACTTCTGATACAAAAGCCAGTAGCTACAGTTTGAAAGTCTGAAGCACATTTTCCCCACTCA---------CTTCCTTATTTTTCCAACAAGAGTTTCATATGCCTTTTTAATAGGTGAGATGTGCAACCCATGGAATGCAGAGTATTCCTGTTTATATCATTATTAAAATGTAAACAGAAATACACTTTATGGAAAAACTGGGGCTAATCATGATTTTTATGCCCCTCCCCCATTTCTAATTTTTAAATAAAATTGGTATATGGGAAAC-ATTATTCTGACTGAGTTCTTGTTGAATATTTGTTGAAAATTTCTACAATTTTAAATGCATTTA chr4 - 94230402 47207579 47207578 47208081 47022322 47022321 47022824 503 TTAAGGTACATCTACAGAACAGCTAACAGTATCTTCCTGAAAATCACTTTCCTGACATTCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTTAATTGGAAAATGTGGCTGATGCAGGAAGAAAAATGAGGCAACACAA---------CATTCATAAATTCAGTGGTTGGCAAGCCAAAATATTGGCTTAGATCAGTCATGGTTTC------------------CT--------AGCTGATAGC--AGGTCAGAAAGACCAGAATGGCTCTTGCCCTCTTAAATTGCCTTTTTCTTTTTTTTTAATTCGTGATTCACGTGTGCCTTTTTAATAGGAGAAATTTGTAACCCGTGGAGAACAATTTTCTCCTGTTTATGCCAGCATTAAAATTCAAATAGGCAGACCCTTTCAGAAGAGGTTTGCTATAATTATGAGATTG----CTTTCTTCCACCTCTACTTT----GTGGCATTGCTGTAACAATGGCTATTACTCTGAA--------TACTGAGAAACTGTGGAAATTTCCAATCTGTTTAAGTGCTTTCA .:..x:....x..::::xx:.....x....::x..:........::...:.:.::....-..x:.:.x:.---------------------------...x....:x.:::....x.:..:.......-.x.:......xx.---------.:..:x....:...x.:x..x......::...x...x............::x......------------------..--------...:::....--x:..:x.....x.:::.:::xx.:..x...x..:.---------:...:..x.....xxxx.:x..x.:x.:.:...............x..:..x..:.....:....:x:..:xx.x:..........::..x:........x:...:..:x.x..x....xx.:.:.:::.x.xxx....:....xx..x----.::..::...::....x...----:.::x....x.:..xx::x::.-....:.....x--------.::...:x.x:...x....x..:.x.:xxx.....:...x..:. 59M1I10M27I31M1I13M9D58M18D2M8D10M2D35M9I149M4D20M4D22M1I11M8D44M 297/464 64.0% 503/94230402 0.0% 92/464 19.8% 34312445 NA +3005 chr4 + 190214555 81527723 81527722 81527775 53 TGAGTTCTTGTTCTGTGTCCAGGAAGAATGAGGAACACAGACAACTGGAGTGT chr4 - 94230402 63924595 63924594 63924647 30305756 30305755 30305808 53 TGGTTTTTTTTTTTGTATCCAGGGAGACTGAGGTACACAGAAAATGGGAGTGT ..:x..:..x..:...:......:...x.....x.......x..:x....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 17603128 NA +3404 chr4 + 190214555 81533468 81533467 81533580 113 CAGGCTGAAGG---GCATTTGTATGATCATAGCTCACTATAACTTCAAACTCCTGGGCTCAAGGGATCTTCCCACCTCAACTTCCCAAGTAGCTAGAACTACACATGTGTGCCACT chr4 - 94230402 18197091 18197090 18197203 76033200 76033199 76033312 113 CAGGCTTAGGGCACACATCTGCTTGG-CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACAC--GTGCACCACT ......x.:..---:...:..:x..:-...x::x:x...:.:.::x..:..:.....:.....x.x.::x.xx:x....:.:.::.........:.........--...::..... 11M3I12M1D77M2D10M 73/110 66.4% 113/94230402 0.0% 6/110 5.5% 63336377 NA +3098 chr4 + 190214555 81568500 81568499 81568545 46 TTTCTTTCCTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 93183529 93183528 93183574 1046829 1046828 1046874 46 TTTTTTTCCCCTCCTTCCTCGATTTTTTTTCTTTTTTCTTTTTTTG ...:.....:..:....:..xx........:......:........ 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -11615029 -82615373 +4317 chr4 + 190214555 81594192 81594191 81594295 104 AGAACATTTTCATTTTCTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT---------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 7730588 7730587 7730706 86499697 86499696 86499815 119 AGAACCTTTTCAGCATGTCATTTTATTCCTTTCCTGTTTTTTCTATTTTTTTTAATAGCTTTGTTTTATTTTTAGCAGTGATCTTGGGTTGttttttttttttttttttctgtttttCT .....x......x:x.x..x...:x:..::.:..........:.x........xx.xx:...x....x.....---------------..x..................:.x.....:. 73M15I31M 79/104 76.0% 119/94230402 0.0% 15/104 14.4% 73863604 NA +3204 chr4 + 190214555 81594208 81594207 81594272 65 CTCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770966 50770965 50771030 43459373 43459372 43459437 65 CTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATTT ..:..:..........:.x:.:.x.....x...x.............x::x.x...::...x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 30823242 NA +3038 chr4 + 190214555 81594209 81594208 81594288 80 TCCTTTCTCTCTCTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 61605805 61605804 61605884 32624519 32624518 32624598 80 TCTTCACTTTTTCTCCAAATTTTTTCTACTCTTGTGGTTTTGTTGGTTTGTTTTTTTTTTTTTTTTTGCTCTCCTTCATT ..:.:x..:.:.....xx:......:.x:.:..x.xx....x..xx...x.................x:.:.::..:x.. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 19988404 NA +3013 chr4 + 190214555 81594221 81594220 81594296 76 CTCCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 16390122 16390121 16390197 77840206 77840205 77840281 76 CCCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATTTTTAGTTCTGTTGTTTGTTTGTTTCTATATA .:..:..x...:......:......:.......:::xx..x.x.....xx..:.x..x...x...x...:.x.x.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 65204099 NA +3091 chr4 + 190214555 81613905 81613904 81613976 72 TGCTCTTCTCTCTTCCAATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAACACAGATCCACCT chr4 - 94230402 54393146 54393145 54393214 39837189 39837188 39837257 69 TACTTCCCTATCTTGCAC---AAAAACAAACAAAGCAACAACAACTACCAGAACAAAAAAATAAATCAACCT .:..:::..x....x..x---.............xx.........x..x.x........x.:.:...x.... 18M3D51M 53/69 76.8% 69/94230402 0.0% 3/69 4.3% 27220759 NA +3056 chr4 + 190214555 81613915 81613914 81613964 50 TCTTCCAATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAAC chr4 - 94230402 4027213 4027212 4027262 90203141 90203140 90203190 50 TCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAC ....xxx.:.......x...x..x...................x...... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 77586702 NA +3028 chr4 + 190214555 81613917 81613916 81613956 40 TTCCAATAAAAAAACAAACAAACAAACAACAACAACAACA chr4 - 94230402 69620996 69620995 69621035 24609368 24609367 24609407 40 TTCTGCTAAGGAAACAAACAAACAAACAACAACAACAACA ...::x...::............................. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 11992921 NA +3377 chr4 + 190214555 81613920 81613919 81613968 49 CAATAAAAAAACAAACAAACAAACAACAACAACAACAACA-------AAAACACAG chr4 - 94230402 34555116 34555115 34555171 59675232 59675231 59675287 56 CGGTAAAAAAACAAACAAACAAAAAACAACAACAACAACAGTATGCCAAAATACAG .::....................x................-------....:.... 40M7I9M 45/49 91.8% 56/94230402 0.0% 7/49 14.3% 47058804 NA +3209 chr4 + 190214555 81613921 81613920 81613963 43 AATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 35083940 35083939 35083982 59146421 59146420 59146463 43 AATACAAAAACAAACAAACAAACAACAACAACAAAAACGGGAA ....x.............................x...:::.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 46529981 NA +3054 chr4 + 190214555 81613922 81613921 81613967 46 ATAAAAAAACAAACAAACAAACAACAACAACAACAACAAAAACACA chr4 - 94230402 71645069 71645068 71645114 22585289 22585288 22585334 46 ATTAAAAAACAAACAAACAAACAAAATCAACAACAAAAAGAATGCA ..x.....................x.x.........x..:..::.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 9968853 NA +3186 chr4 + 190214555 81613926 81613925 81613968 43 AAAAACAAACAAACAAACAACAACAACAACAACAAAAACACAG chr4 - 94230402 21532614 21532613 21532656 72697747 72697746 72697789 43 AGAAGCAAGCAAGCAAACAAGAACAGCAACAACAAAAACACAG .:..:...:...:.......x....:................. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 60081312 NA +3394 chr4 + 190214555 81613927 81613926 81613966 40 AAAACAAACAAACAAACAACAACAACAACAACAAAAACAC chr4 - 94230402 79230835 79230834 79230874 14999529 14999528 14999568 40 AAAACAAACAAACAAACAATAACAACAACAACAAAAAAAC ...................:.................x.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 2383092 NA +3110 chr4 + 190214555 81614946 81614945 81615012 67 GGCAAAAAGAGCAAAACTAAAAAAAAAAAAAAAAAAAAAAAACCCAAAAGAAAACAAAAAAACAGTC chr4 - 94230402 54300429 54300428 54300495 39929908 39929907 39929974 67 GACATGGAGAGGAAAGGAAGCCAAAAAAAAAAAAAAAACCAACCCAAAACAAAACAGAAGAAAAGCC .:..x::....x...:xx.:xx................xx.........x......:..:..x..:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 27314517 NA +3032 chr4 + 190214555 81626866 81626865 81626924 59 ATATATATGTATGTGTGTATATGTGTGTGTGTGTGTGTATATATGTGTGTGTGTGTGTG chr4 - 94230402 39267144 39267143 39267202 54963201 54963200 54963259 59 ATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATG ...x..:...:.:..x.:::.:...xx................x.....::.x...:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 42359722 NA +3160 chr4 + 190214555 81629153 81629152 81629234 82 GATTTTTTTCCTTCTTGTTCTCCTTCACTTTCTCTTTCTTCTCCTTCTCCCTGCCCCTCCTCCTCTTCTTCTTTTTCTTCTT chr4 - 94230402 7499875 7499874 7499954 86730449 86730448 86730528 80 GATATGTTTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCT-CTTAACCTGCCTCCT-TTTTTTTCTTTCGTCTT ...x.x......x...x........::..:..::.......x::.x..-.:.:x..:x......-..:..:.:....x.... 48M1D15M1D17M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 74129278 NA +3700 chr4 + 190214555 81646160 81646159 81646364 205 TCTTAATAATACTATAAAATAGGAACTGTTACTGTCATTCCTGCTTTACAGATAAATATACTGAGGCACAAAGAAGTTAAGAAACTTGCCT--------------GAGTCCACACAGCTAGAAG-ATGACA--GATAATCTGACTCCC------TTGCCTTGGCTTAATAAAAGTCCTGTTTGGGGTGTGTA-------TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 10729168 10729167 10729399 83501004 83501003 83501235 232 TCACAATACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCCAGGTATGTGGGTGTGTGACACCCATCTTCTGTTTCTTAGCTAATCACCCTTCCTCACTAACAAACTTAACTGGAGTGTGTACAAACACTGCATGTACTCATGTGTGCACGTGTGCCTG-GTGTG ..x:....x:x..:.:.::....x.--:.....:...x::.:::.......:.:::x.x...........x.x.:......x..:.....:--------------..:....x::.xx.:.:x.-:.....--x..xx....x:..::------.::..:.xx..:.x...x.:x.:.:x:...:.......-------..::...::x::......:::.....:x..-..... 25M2D64M14I19M1I6M2I15M6I38M7I30M1D5M 128/202 63.4% 232/94230402 0.0% 33/202 16.3% 70916992 NA +3258 chr4 + 190214555 81654409 81654408 81654475 67 ACATGAGATGTTTTCTTTTTTTTTGTTTTTTTGTTTTGTTGTTGTTGTTTTTTGTTT----------GTTTGTTTTG chr4 - 94230402 69971083 69971082 69971159 24259244 24259243 24259320 77 ATAAGAAATGTTTTTTTTTTTAATGTTTGTGGGGTTTGTTGTTGTTGTTGTTTGTTTCTGGAGGGGAGATTGTTTTG .:.x..:.......:......xx.....x.xx.x...............x.......----------.x........ 57M10I10M 55/67 82.1% 77/94230402 0.0% 10/67 14.9% 11683326 NA +3626 chr4 + 190214555 81654421 81654420 81654473 53 TTCTTTTTTTTTGTTTTTTTGTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTT chr4 - 94230402 17488385 17488384 17488437 76741966 76741965 76742018 53 TTCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT ....x...x....x:.....x.x...........:.................. 53M 46/53 86.8% 53/94230402 0.0% 0/53 0.0% 64166036 NA +3166 chr4 + 190214555 81654441 81654440 81654474 34 GTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT chr4 - 94230402 71168437 71168436 71168470 23061933 23061932 23061966 34 GTTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 10486004 NA +3041 chr4 + 190214555 81683354 81683353 81683416 63 TTGTTGTGTGTGGTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTTGAGACAGTCTTACTGTGTC chr4 - 94230402 76471838 76471837 76471900 17758503 17758502 17758565 63 TTGCTATGTTGGGTTTTTTGTTGTTGTTGTTGGTTTTTTTTTTAGGTATTTTTTTCCAGTATC ...:.:...xx.....................x..x.......x.:x.:xx.:..x.x..:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 5211516 NA +3070 chr4 + 190214555 81702999 81702998 81703048 50 TTTATGCATATATATGTGTGTGAATGTATATATATACACACATATATATA chr4 - 94230402 56650833 56650832 56650882 37579521 37579520 37579570 50 TTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATA ...:::..xx......:.....x..x......:.........:....... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 25052166 NA +3576 chr4 + 190214555 81703086 81703085 81703146 61 ATCTCATACACACACACACACACACATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 49987092 49987091 49987152 44243251 44243250 44243311 61 ATCATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatatatat ...x:...:.....x...........:.::.:...........x.....:.:.:.:.:.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 31715994 NA +3159 chr4 + 190214555 81710184 81710183 81710248 65 TCATTGCTTTCCCACCTCCCCCCTCACCCCCCAACACACACACAACTGTTTTCCTTTGTCTCTTG chr4 - 94230402 30040830 30040829 30040894 64189509 64189508 64189573 65 TTATTTCTTTACTTCCCCCCCCCCCCCCCCCCCACACACACACACACCTTTTTATTTATTTTTTG .:...x....x.:x..:......:.x......x...........xx:x....:x...:.:.:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 51669354 NA +3070 chr4 + 190214555 81720791 81720790 81720844 54 AAAAACAACAACAAAAACAAACAAACAAAAAACCATCAAAAAGTGGGCAAAGGA chr4 - 94230402 78618251 78618250 78618304 15612099 15612098 15612152 54 AAAAATAACAAAACAAACAAACAAACAAAAAACCCTCCGAACATCTGTAAAGGA .....:.....x.x....................x..x:..x:.xx.:...... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 3102540 NA +4465 chr4 + 190214555 81737639 81737638 81737765 127 TTATTCTGGGTATTTTACATATATA--AACTCATTTAATTTCAAGTT-----TATGAGGTAGGTA-CTATTATATTTCCCATTTTACAGATAAGGCAACTGAGGCACAGAGAGGTTAAGTAACTTGCTTATGGTC chr4 - 94230402 10729128 10729127 10729262 83501141 83501140 83501275 135 TCACTCTGAAGATCCTGAATAAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:.:....::x..::.:x...x.:.--..:.x.....:::...x:x.-----.:...........-:..:...xxx::...........:.::.:x............x.x...........:....::.x:... 25M2I20M5I13M1I69M 88/127 69.3% 135/94230402 0.0% 8/127 6.3% 71008511 NA +3066 chr4 + 190214555 81763728 81763727 81763770 43 ACAACAACAAAAAAACAAACAAACAAACAAAAAAAGCAGAGTG chr4 - 94230402 57305367 57305366 57305409 36924994 36924993 36925036 43 ACAACAGCAGCAAAACAAACAAACAAACAAAAAAGGTAGGATG ......:..:x.......................:.:..::.. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 24458361 NA +3004 chr4 + 190214555 81763738 81763737 81763799 62 AAAAACAAACAAACAAACAAAAAAAGCAGAGTGTTTCATTCATTGCAACAGAAAGGCAATAA chr4 - 94230402 50789459 50789458 50789520 43440883 43440882 43440944 62 AAAAACAAACAAACAAACAAAAACCTCTGTGTCTCTCTTTTGCTGAAGTATAAAGGTAATAA .......................xxx.x.x..x.:..x..:::..x.::.x.....:..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 30974279 NA +3051 chr4 + 190214555 81780387 81780386 81780452 66 CCTCAAAAAAAAAAA-----AAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAATAGA chr4 - 94230402 32280594 32280593 32280664 61949739 61949738 61949809 71 CTTCAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGA .:.....:x....:x-----........................::...x.xx.:......x.:::..:.. 15M5I51M 50/66 75.8% 71/94230402 0.0% 5/66 7.6% 49499793 NA +3202 chr4 + 190214555 81780390 81780389 81780459 70 CAAAAAAAAAAAAAAAAAAAAAAAGAAAG--------------AAAGAAAGAAAGAAAAGAAAAGAAAAGAAATAGACTTTTCA chr4 - 94230402 25066984 25066983 25067067 69163336 69163335 69163419 84 CAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAATCAACTATTCA ....:.x.:.x.:..:...x..x...:..--------------:..:..............x............x:...x.... 29M14I41M 55/70 78.6% 84/94230402 0.0% 14/70 20.0% 56713406 NA +3905 chr4 + 190214555 81788088 81788087 81788204 117 ATGTAGACACGCACACACATATATATACCTCCTATTTGTGTGTATCTGTGTGTATATATATGTATATATACA------TATGTATGTATATATGTATGTATACATATGTATGTATATATGTAT chr4 - 94230402 17853431 17853430 17853545 76376858 76376857 76376972 115 ATGTAAACAAGCACACAGAGAGGCACATTTTCTCT--------ATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCAT .....:...x.......x.x.x::.:.::.:..x.--------......x.:...::.:..:.:....:...------.x......:...:......x.x.:........x:x.x:....:.. 35M8D29M6I45M 77/109 70.6% 115/94230402 0.0% 14/109 12.8% 63934657 NA +3569 chr4 + 190214555 81788132 81788131 81788199 68 TCTGTGTGTATATATATGTATATATACATATGTATG------TATATATGTATGTATACATATGTATGTATATA chr4 - 94230402 2899020 2899019 2899093 91331310 91331309 91331383 74 tctatgattgtatgCATGTATATATTCAAATGCATGATTTTGTGTATATGTATGTAATCATATATATGTATATA ...:..xx.:...::..........x..x...:...------.:............xx.....:.......... 36M6I32M 55/68 80.9% 74/94230402 0.0% 6/68 8.8% 78889112 NA +3034 chr4 + 190214555 81788140 81788139 81788221 82 TATATATATGTATATATACATATGTATGTATATATGTATGTATACATATGTATGTATATATGTATATATATGTATATGTATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.:.....:.::...x.:......x..:.........:x.....xx:..:::.:.:.:::.:.:.x.:::.x...x... 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 73392351 NA +3007 chr4 + 190214555 81788141 81788140 81788198 58 ATATATATGTATATATACATATGTATGTATATATGTATGTATACATATGTATGTATAT chr4 - 94230402 65232556 65232555 65232613 28997790 28997789 28997847 58 ATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGT ..x.....:....:........xx.:xx...:........:..:.x.x........:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 16555585 NA +3131 chr4 + 190214555 81788149 81788148 81788214 66 GTATATATACATATGTATGTATATATGTATGTATACATATGTATGTATATATGTATATATATGTAT chr4 - 94230402 51294126 51294125 51294191 42936212 42936211 42936277 66 GTATTTCAGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCAT ....x.xx:......::.:.x.:.:..:.:::x.:............x:..........:...:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 30494023 NA +3081 chr4 + 190214555 81788244 81788243 81788301 58 TATGTATATGTATATATGTATATATACATATGTATATGTATATATGTATATATACATA chr4 - 94230402 27588135 27588134 27588192 66642211 66642210 66642268 58 TATGTATGTGCATATTCATATATATACATTGGTGTATGAATATTAGTATATACGTATA .......:..:....x::...........xx..:....x....xx.......:::... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 54200109 NA +3095 chr4 + 190214555 81788331 81788330 81788391 61 GTATATGTATATATGTGTATATATATGTATATGTATATATGTATATATATGTATATATACA chr4 - 94230402 51294134 51294133 51294194 42936209 42936208 42936269 61 GCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCA .:.....::...x.....::.:.:x..:........:..x....:.....::..::..x.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 30494197 NA +4307 chr4 + 190214555 81788334 81788333 81788445 112 TATGTATATATGTGTATATATATGTATATGTATATATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACACACATAGACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGA----GTACATATAAATACGCCCACAGAGACACACATGTATA .:..:..::..:.x:...:.:..:..:.::x.x::...x:..:...:.....x:....::x........:x----...:.....x.:..:.x....x..........:.... 71M4D37M 73/108 67.6% 108/94230402 0.0% 4/108 3.7% 8667232 NA +3702 chr4 + 190214555 81788359 81788358 81788445 87 ATATGTATATATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACACACATAGACACACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTAT--GCCTACATTAATA--CACACACACACACACAGACACAAATGAATA ..:...:...:...::...x.::.:...x...........--.:x..:..xx...--:.............:.......x..:x... 40M2D13M2D30M 63/83 75.9% 83/94230402 0.0% 4/83 4.8% 73392571 NA +3019 chr4 + 190214555 81788362 81788361 81788421 60 TGTATATATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACA chr4 - 94230402 27588133 27588132 27588192 66642211 66642210 66642270 60 TGTATGTATGTGCATATTCATATATATACATTGGTGTATGAATATTAGTATATACGTATA .....:.....::....x::...........xx..:....x....xx.......:::.:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 54200229 NA +3127 chr4 + 190214555 81788362 81788361 81788425 64 TGTATATATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ...:..:..::x.:.....::..::.:.x....:.xx:.......:.....:...x........ 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 44425322 NA +3269 chr4 + 190214555 81788369 81788368 81788445 77 ATGTATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACACACATAGACACACATATATA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATG--TATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ...:.:..x...........:--.....:....xxx:......x.xxx::......x...:..x.....:....... 21M2D54M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 27495215 NA +3576 chr4 + 190214555 81788369 81788368 81788447 79 ATGTATATATATGTATATATACATATGTATATGTATATATGTATATAT----ACACACACACACATAGACACACATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:.:...:...::...x....:.:.x..::...:....:x..:..----.............:.x.x.....x..:x... 48M4I31M 58/79 73.4% 83/94230402 0.0% 4/79 5.1% 73392581 NA +3083 chr4 + 190214555 81788372 81788371 81788448 77 TATATATATGTATATATACATATGTATATGTATATATGTATATATACACACACACACATAGACACACATATATATAT chr4 - 94230402 8395789 8395788 8395865 85834538 85834537 85834614 77 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:.:.:.....:.::...x.:......x.::....:.:.::x..:.:xx.:.......:.x.......x.:.:.x.. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 73392583 NA +3058 chr4 + 190214555 81789141 81789140 81789211 71 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGGGAT chr4 - 94230402 33398810 33398809 33398880 60831523 60831522 60831593 71 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat ...:.x.:x:x.....:........:.:::::.:....x.x.............x.:...x...x.x.x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 48390331 NA +3100 chr4 + 190214555 81794799 81794798 81794877 79 ATCTTGCATGCTGCATT---TATTAGA--------GAAAAGATCTTTTTAAAATGTCATTCTCCTGCTTAAAATTCTTCAGTGAATCTTC chr4 - 94230402 45466985 45466984 45467074 48763329 48763328 48763418 90 ACCTTGATTAGTGCATTCTCTATTATATGTTACCTGACAATATCTGTTTGAAGTGTTACTCTCATGCTCAGAATTTTTCAGTGATTTTTC .:....xx.:x......---.....x.--------..x..x....x...:..:...:.:....x....:.:....:........x.:... 17M3I7M8I55M 60/79 75.9% 90/94230402 0.0% 11/79 13.9% 36327814 NA +3760 chr4 + 190214555 81851538 81851537 81851639 102 AAAGAAAAAGAAAGAAAGAAAGAAAGAGAGAGA--------GAAAAAGAAAG----------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA---AGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:..........::.:.:......--------.......x..:----------.....xx....x.:.::..x:.:....:.........:x.---::..:..:..:..x.... 33M8I11M10I40M3I18M 76/102 74.5% 123/94230402 0.0% 21/102 20.6% 51318374 NA +3501 chr4 + 190214555 81851542 81851541 81851647 106 AAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACA chr4 - 94230402 30533164 30533163 30533265 63697138 63697137 63697239 102 AAATAAAAAGGAAGAAAGAAAAGAGGGGAG----AGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACA ...x.:....:..........::::.:...----.......xx.x:.:....x..:::xxx....x.:.:.xx....x.:.::..x:.:....:.....:.:.... 30M4D72M 67/102 65.7% 102/94230402 0.0% 4/102 3.9% 51318378 NA +3128 chr4 + 190214555 81851549 81851548 81851715 167 AAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACA------AATGAACGAACTGATATTTTCACTTGGAAAGTATTACAGAAGAGTACTTTGGCTGAATTCAAATGTAA chr4 - 94230402 44054043 44054042 44054208 50176195 50176194 50176360 166 AAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAATCCATCTTGCCAGAAACAAACCTTTCTTATCAGTTAGAGG-------CAAATGGTACCTCTGCAAAATCCAATTTCAA .............::x:.:.:x...x.x:..::.x........x:.x:x...::x:.:x:..x.:..:.......:.:::x..x:...x.....:xx..------x.x:...:...:xx.x..x...x..:..::-------x:..x:....:.:x..x:...:...x.x:.. 99M6I30M7D31M 95/160 59.4% 166/94230402 0.0% 13/160 8.1% 37797506 NA +3206 chr4 + 190214555 81855446 81855445 81855485 40 TTTTGCTGTTGTTGTTGTTGATTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801532 67801531 67801571 26428832 26428831 26428871 40 TTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT .....:........:..:..:................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 14053914 NA +3444 chr4 + 190214555 81857109 81857108 81857171 63 CTGCAACCTCTAACTCCTGGGTTCAAGTGATCCTCCTGCCTCAGCCTACCAAGTAGCTGGAAC chr4 - 94230402 18197126 18197125 18197188 76033215 76033214 76033277 63 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAAC ..:..:..:xx.:..:.............x.:.x.xx.x........x:.............. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 63659983 NA +3247 chr4 + 190214555 81894597 81894596 81894653 57 GGAAGCT------ACAGGAGGATGAATACATAAACTGAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 42857966 42857965 42858028 51372375 51372374 51372437 63 GGAAGCTCGGGGAACAGCAGAATGAAAACACAAACAGAAGAAACAGGAAAAAAAAAAAAAAAA .......------....x..:.....x...:....x...:...x.::................ 7M6I50M 48/57 84.2% 63/94230402 0.0% 6/57 10.5% 39036631 NA +3203 chr4 + 190214555 81930656 81930655 81930720 65 TGGGGGTTTTTGTTTGTTTGCTTGTTTTTGTGGTTTTTTTGGTTTTGGTTTTGGTTTTTTTGTTT chr4 - 94230402 30150567 30150566 30150631 64079772 64079771 64079836 65 TGGTGGTTTTTGTTTATTTGTTTGTTTTTCTTGCTTATTGGTTGTTGATTTTTTTTTTTCAGTCT ...x...........:....:........x.x.:..x..x.x.x...:....xx.....:x..:. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 51780089 NA +3032 chr4 + 190214555 81930684 81930683 81930738 55 TGTGGTTTTTTTGGTTTTGGTTTTGGTTTTTTTGTTTGTTTGTTTTTGCTTCATA chr4 - 94230402 62884119 62884118 62884173 31346230 31346229 31346284 55 TATGGTTTTTTTGGTGTGGTTTTTGGCTTTTTTGTGTGTTCTATTTTGTTTTTTA .:.............x.x.x......:........x....:xx.....:..:x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 19046565 NA +3046 chr4 + 190214555 81930686 81930685 81930741 56 TGGTTTTTTTGGTTTTGGTTTTGGTTTTTTTGTTTGTTTGTTTTTGCTTCATACTT chr4 - 94230402 21894904 21894903 21894959 72335444 72335443 72335499 56 TGATTTTTGTCTTTTTTGTTTCAATTTTTTTGTTTGTTTGTTTTCTTTTAATATTT ..:.....x.xx....x....:::....................:x:..x...:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 60035782 NA +3274 chr4 + 190214555 81949752 81949751 81949831 80 TGAGTTTTTTCTGTTTTCTTTTTTTTAAGGAATCTTTCACTTAGTAAAAAAAAAAAAAAAAAAAAAAA--AAACAGAACAAA chr4 - 94230402 10872456 10872455 10872537 83357866 83357865 83357947 82 TGATTTTTTTGTTTTTTGTTCCCTTCAAGGAAGCGTTGCAATGTTAAACAAAAAAAAAAAAAAAAAAAGGAGGCAGAGTAAA ...x......x.x....x..:::..:......x.x..xxxx.:x....x...................--.::....::... 68M2I12M 59/80 73.8% 82/94230402 0.0% 2/80 2.5% 71077296 NA +3656 chr4 + 190214555 81962426 81962425 81962501 76 TTAATTTCTTTGTGCCTCAGTTTCCCATCTGTAAAATGGAAATAATAA-ATAGTTTTGTTATGAGAATGAACATATA chr4 - 94230402 15751744 15751743 15751819 78478584 78478583 78478659 76 TTAATTCCTCTGTTCCTGAGTTCTCCATCTGTAAAATGGAAATAGTAATATTGCTCTACT-TGGAAGTAAAAATATA ......:..:...x...x....::....................:...-..x.:.:.::.-..::.:.:..x..... 48M1I11M1D16M 58/75 77.3% 76/94230402 0.0% 2/75 2.7% 66210682 NA +3707 chr4 + 190214555 82014726 82014725 82014808 83 CCACAACCTCCGCCTTCTGGGTTCAGGCGATTCTCCTGCCTCAGTCTCTCAAGTGGCTGGGACTACAGGTGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx:x............:.:.x...x.xx.x.....:..:......:.....:......--:...::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 63817600 NA +3828 chr4 + 190214555 82015121 82015120 82015280 160 GCAATACATATAAAGAAGCAAGAAGGAAGAAGGAGGAGGAGGAGAAGGAGGAGAAAGAAGACAGA------AGAAGAAAGGGAAGGAG-GAGGAGAAAGAAGAGAAAGAA--GACAGAAGAAGAATGAGAAGGAGGAAATGAAGGAAGAGAAGAAAAAGGAAGAAAAGA chr4 - 94230402 42083986 42083985 42084154 52146249 52146248 52146417 169 GTAATAATCTTATAGGAGCTTATAGCAAAAGGGAGTAGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAA .:....xx:x..x..:...xx:x..x..:.:....x..:..x:..:::::...........x.:.------.:....x.x:x.x..x.-.x::..::.::..x.x.:...--..........x........xx..:x:x..:.::..:.:..:.::.:......:.::. 65M6I17M1I21M2I57M 99/160 61.9% 169/94230402 0.0% 9/160 5.6% 39931135 NA +3351 chr4 + 190214555 82015191 82015190 82015304 114 AAAGGGAAGGAGGAGGAGAAAGAAGAGAAAGAAGACAGAAGAAGAATGAGAAGGAGGAAATGAAGGAAGAGAAGAAAAAGGAAGAAAAGAAGGAA----GAAAAGGAGAAGGAGGAGG chr4 - 94230402 30533169 30533168 30533286 63697117 63697116 63697234 118 AAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:.....:.:..::...::.:.........xx::::..:.:x..x.:xxx::::x...x:xx.:..x.......x:.....:......:::..----.:........:.:.x:.:. 95M4I19M 69/114 60.5% 118/94230402 0.0% 4/114 3.5% 51482022 NA +3088 chr4 + 190214555 82015258 82015257 82015330 73 AGAGAAGAAAAAGGAAGAAAAGAAGGAAGAAAAGGAGAAGGAGGAGGGAGAAGAAGG------AAGGAGACAAATTAAG chr4 - 94230402 51871015 51871014 51871093 42359310 42359309 42359388 79 AAAAAAGCTGAATGAAAAAAAGAAGAAAGAAAATAACAGAGAAGAGGGAAAAGAAGGTGGTCTAGAGGAACGAGTTAGG .:.:...xx:..x...:........:.......x:.x.::..:......:.......------.::.::..:.:...:. 57M6I16M 51/73 69.9% 79/94230402 0.0% 6/73 8.2% 30144243 NA +3040 chr4 + 190214555 82025761 82025760 82025830 70 ACCTAACCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15963366 15963365 15963435 78266968 78266967 78267037 70 ATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT .:..:::..:xx.x......:.......:.....::::.:..xx...........xx.:...x....:.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 66062395 NA +3000 chr4 + 190214555 82025771 82025770 82025826 56 CTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15963380 15963379 15963435 78266968 78266967 78267023 56 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ......:.......:.....:::::...xx...........xx.:...x....:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 66062391 NA +3366 chr4 + 190214555 82025779 82025778 82025834 56 CTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15963380 15963379 15963435 78266968 78266967 78267023 56 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ......:.......:.......::....xx...........xx.:...x....:.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 66062399 NA +6840 chr4 + 190214555 82043993 82043992 82044416 424 CCACCTACCTCAAACATGGGAGAGGCGCCCTTGCTCGGCAACGTGCAGCCCAGGAGCTCGGCGAGAAACTTTGCCATATACAAGCGGTGAGGCAGGGTCCCTCCCGATGCGCCGTTTCTGTCCTTTCCCCTTGCCAGAGCCCGAGCGCCAGGATCCTGCCCGCAGCCCGCCCGCCAGCCGGGGCCGTGGCTCGGGGCTGC---CCCGCGGCTGCGGCGGAGG--GGCTGGGCCGGGCGGGGAGAGCTCGGCGGCCGCCCGCCCCGCGGCGTCCAGCGGTGCGAGTGCGCGCAGCCCCGTCCGCAGCCCGAGCCTCCGCTCTGCGGGAGCCGGGGCG------------------------CCGTCGCCGCGCTAG----------------------CCTTTTCCTCTGAATGTCACTATTACCATAGTAAAGGGAAGGGCCCCGCCGAGGGGGTGGCGGGAGGGCCAACGGCGC chr4 - 94230402 47288841 47288840 47289245 46941158 46941157 46941562 405 CCACCTACCTCACGCCCAGAAGAGCTGCCCTTATCAGGCAGTGCACAGCCTAGGAGCTCCGCAAGAAACTTTGCCATATACGAGCAGGGAGGAAGGGGTCTTC------------------CTTGTCACTGTGCCAG---------GCAAATATCCT-TTGGCAAGGGGACAGCTCAGTGGAACATTTCTTCGTCGCTGCAAATCCAGGGCTGCTTCTGGGGTTTGCT-ATCCAGGC-------------CATCTGCCAGCATCAT----TCCACCGGGGC-----TGCACAG-------------------GTTCACTGGGTGGTAGCCGAGACGGCTTACAAAAACAAATCAAGTAAACCAGCACAGTGCTGGGCTTCTCAGTGTTTGCTTCTCCCCTTTCCTGCTGAATGTCACTATTCCTATAGTAAAGGAAAGGGGCCCCGCAGAGGGGTGTTGAGAGGGACAACACTGC ............x:.x::.:....x:......:::x....::.::.....:........x..:..................:...:.x....x....x:.:..------------------.:.x..x.:x......---------..x.:x.....-::x...:xxx.x.x..:x:x:..::.xx.xx:...xx.....---:..:x......xx.x.:..--x...-:x..:...-------------.:x.:...x..x:.::----....x...x..-----:..:...-------------------x.:.:..xx.:..x.....:.:..------------------------..:x.:.x.:...:.----------------------.....:.:x...............x.:..........:.....x...xx.:::......x:.:.....x....:x:.. 103M18D16M9D11M1D42M3I19M2I4M1D8M13D16M4D11M5D7M19D24M24I15M22I78M 240/354 67.8% 405/94230402 0.0% 121/354 34.2% 34755152 NA +3111 chr4 + 190214555 82046562 82046561 82046601 40 GTACTTCAGTTTTCTCATCTGCAAAATGGGTTTAATAATA chr4 - 94230402 34827178 34827177 34827217 59403186 59403185 59403225 40 GTATTTCAGTTTTCTCATCTGTAAAACAGGTTTAATAACA ...:.................:....::..........:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 47219384 NA +3206 chr4 + 190214555 82109347 82109346 82109414 68 TAGAAGAGGGAAAAAAAATATCCCAGCACACACACACAAACACACACACACACACACACACACACACA chr4 - 94230402 87372723 87372722 87372790 6857613 6857612 6857680 68 TAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATA ....x:..:........x...::.x:x...........:.........:x:.:..::.:::..::.:. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% -5263376 -88967026 +3097 chr4 + 190214555 82119752 82119751 82119816 65 AAAAAAAAAAAAAAAAAAAAACAGAAAGAAAATCATGAAAAAAGAAAATATATTTACTGTTTATT chr4 - 94230402 59582181 59582180 59582245 34648158 34648157 34648222 65 AAAAAAAAAAAAAAGAAAAATTAAAAAGATCAACATATAAAGTGAAAATATAATTTTAGTTGATT ..............:.....x:.:.....xx.x...:x...:x.........x..x:x...x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 22537571 NA +3017 chr4 + 190214555 82170149 82170148 82170200 52 GCAACAGAGCAAGACTCCGTCTCAAGACAAAAAAAAAAAAAAAAAAAAAGTT chr4 - 94230402 40625725 40625724 40625776 53604627 53604626 53604678 52 GCTACAGAACAGAACTCAGTCCAAGGTTAAAAAAAAAAGAAAAAAAAAGGTT ..x.....:..::....x...:x.:.x:..........:.........:... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 41544424 NA +3096 chr4 + 190214555 82181534 82181533 82181611 78 AGTATAATAAAAAATAAATAAATAAATAAATAAATAAGTAAATAAAAGTTTTAAAAAAAAAGAAGGAAAATTTGGTCT chr4 - 94230402 30940060 30940059 30940137 63290266 63290265 63290343 78 AGTAGGAAAAAAAATAAACAAACAAATGAAAAAAAAAGTAGACAGAATGTCAAATGAGCAAGAAGAAAGGGCTGATTT ....x:.x..........:...:....:..x...x.....:.:.:..xx.:x..x:.:x......:..::x:..:.:. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 51241474 NA +3348 chr4 + 190214555 82182600 82182599 82182703 104 AATTTATGTATATACACACAAA----------CACACACATATACATATATACACATGTATATACATATATATACACACACATGCATACATGCACACACTCACATATAAATAAA chr4 - 94230402 8395755 8395754 8395868 85834535 85834534 85834648 114 AATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAA .....:.::...:.x.x:x...----------..::::::...:::.::...x........x.......:...:.x:...:xx::.:...::.......x..x.:.:....:.. 22M10I82M 66/104 63.5% 114/94230402 0.0% 10/104 9.6% 73786845 NA +3360 chr4 + 190214555 82182621 82182620 82182686 66 ACACACACATATACATATATACACATGTATATACATATATATACACACACATGCATACATGCACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:..:.x::::.:.:....:..:...::.....:.xx............:...::..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 67217802 NA +3309 chr4 + 190214555 82182639 82182638 82182695 57 ATACACATGTATATACATATATATACACACACATGCATACATGCACACACTCACATA chr4 - 94230402 7596413 7596412 7596469 86633934 86633933 86633990 57 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA .....x...:...:.x..:...........:....:.....x:..:.:...:..::. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 74586226 NA +3196 chr4 + 190214555 82203573 82203572 82203633 61 TTTGCTTGTTTATTAGTGGAGTGTGGTTTTTTGGGGTTTTTTTTTGTTTGTTTTTTGTTTT chr4 - 94230402 71439621 71439620 71439681 22790722 22790721 22790782 61 TTTTCTTATCTATTTCAGGCTTTTGTTCTTTTGTGGGTTTTTTTTGTTTGTTTTTTGTTTT ...x...:.:....xxx..xx.x..x.:.....x..x........................ 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 10763952 NA +3434 chr4 + 190214555 82214794 82214793 82214929 136 TATACACACACA-----------CACGCACACACACACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACACATACGCACACACACATACATGCATATATACATATATATC chr4 - 94230402 73121075 73121074 73121219 21109184 21109183 21109328 145 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAG--AGACACACATGTATAAGCAAATTTC .:.....x....-----------.x..::::..::..:.:x:.......:::...:.x.x.:..:x::...:..::...x:..:.::x:.....:.:x:..:...:.x......x....x--.x...::...:....x::.x..x.. 12M11I97M2D25M 82/134 61.2% 145/94230402 0.0% 13/134 9.7% 9093719 NA +4099 chr4 + 190214555 82214806 82214805 82214983 178 CACGCACACACACACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACACATACGCACACACACATACATGCATATATACATATATATCTCCTTTAGGAGACACTCAAATCACCC------GCTTGGCTTTCTGGTCTTCCAGTAAGTG chr4 - 94230402 73121106 73121105 73121282 21109121 21109120 21109297 177 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT-------TTTTCAGATACGCTCAGCCCATACACCGATGCTTTGACATTTCATCACCAAGTAATTG ..:...:.:x..:.............x:x:...:x:.::...:::.:.x::...::x:.....:.:x:..:.....x...::.x..:.x:x.......::..:.x...x..x.x.x...-------:...x:..x..:....:x:..:x.------....x.x:x.:.x:..x:.x.....x.. 119M7D24M6I28M 104/171 60.8% 177/94230402 0.0% 13/171 7.6% 9093700 NA +3382 chr4 + 190214555 82214808 82214807 82214910 103 CGCACACACACACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACACATACGCACACACACATACAT chr4 - 94230402 73121106 73121105 73121208 21109195 21109194 21109297 103 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTAT .:::..:.:x..:...:...:....:x.x::.::x...:....::.:.x::.:..:x:.....:.:x:..:.....x....:.x:..:x.x........::.. 103M 61/103 59.2% 103/94230402 0.0% 0/103 0.0% 9093702 NA +3376 chr4 + 190214555 82214809 82214808 82214915 107 GCACACACACACACATATACACACGCACATACATGTATATACACACACACATACATATATATATATAT----ATATATATATACACATACGCACACACACATACATGCATA chr4 - 94230402 8395760 8395759 8395870 85834533 85834532 85834643 111 GTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:...x.x:x.x..x.x.xx.xx...:::.....:.:::..:.x....::..x..:....:...----.:..xx...:.....:..:......x...:.x...x... 68M4I39M 70/107 65.4% 111/94230402 0.0% 4/107 3.7% 73819049 NA +3055 chr4 + 190214555 82214830 82214829 82214889 60 CACGCACATACATGTATATACACACACACATACATATATATATATATATATATATATACA chr4 - 94230402 76306996 76306995 76307055 17923348 17923347 17923407 60 CACGCACACACATTTATCTAGACAAACAGATACATACCTATGTATATGCAAATCAATACA ........:....x...x..x...x...x.......:x...:.....::.x..xx..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 5907834 NA +3657 chr4 + 190214555 82222610 82222609 82222683 74 TATATAGATATATACATATATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACAT--GTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:......x:.:..:..--..:...:..:...:.:.:...:x......x..x...........x...... 21M2D51M 55/72 76.4% 72/94230402 0.0% 2/72 2.8% 29741374 NA +4117 chr4 + 190214555 82222650 82222649 82222721 72 TATATAGATATATACATATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:......x:.:..:....:...:..:...:.:.:...:x......x..x...........x...... 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 29741414 NA +3215 chr4 + 190214555 82222694 82222693 82222802 109 GATATATACATATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTATATATGTATATATAG chr4 - 94230402 64944117 64944116 64944218 29286185 29286184 29286286 102 GATCTTAACATAGATACGT------ATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG-ATATAG ...x.xx.....x..::..------...x:..x...:......:..:....x....x.xx.:...x.x.x...xx:.....:.x.x..:......:...:.:-...... 19M6D77M1D6M 72/102 70.6% 102/94230402 0.0% 7/102 6.9% 17278577 NA +3082 chr4 + 190214555 82222738 82222737 82222802 65 TACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTATATATGTATATATAG chr4 - 94230402 61435325 61435324 61435389 32795014 32795013 32795078 65 TGCAAGTGTTTGTATATTTTAGTGTACATAGATACATTCCAATGTATGTATATATATGTACATAG .:..x:...x...:...x.xx..:..:.......:..x.xx....:.........:.:..:.... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 20787413 NA +3196 chr4 + 190214555 82222745 82222744 82222871 127 GTGTGTGTATATATGTATATATAGATATATACATATGTGTGTATATATGTATATATAGATATA--------TACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATA chr4 - 94230402 61435254 61435253 61435388 32795015 32795014 32795149 135 GTGTCtatatttaaaaatataataaaaGAGACATCTGAGCATCTTGTTTTAAAAACAGCCATCAAGGCTACTGCAAGTGTTTGTATATTTTAGTGTACATAGATACATTCCAATGTATGTATATATATGTACATA ....x.:...x..x:x.....xx:.x.x.x....x..x.::.x.xxx.x..x.x.:..x:..x--------.:..x:...x...:...x.xx..:..:.......:..x.xx....:...:..........:... 63M8I64M 83/127 65.4% 135/94230402 0.0% 8/127 6.3% 20787491 NA +3099 chr4 + 190214555 82222758 82222757 82222815 58 TGTATATATAGATATATACATATGTGTGTATATATGTATATATAGATATATACATATG chr4 - 94230402 71732108 71732107 71732165 22498238 22498237 22498295 58 TGCATACATAAAACTACATATATTTGTGTATACATGTATATAGAGACATAAATTTATG ..:...:...:.xx..:.:....x........:.........x...:...x.:x.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 10490650 NA +3366 chr4 + 190214555 82222768 82222767 82222871 104 GATATATACATATGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATA chr4 - 94230402 64944117 64944116 64944217 29286186 29286185 29286286 101 GATCTTAACATAGATACGTATAAAT--AGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG-ATATA ...x.xx.....x:.::.....x..--.x...:......:..:....x....x.xx.:...x.x.x...xx:.....:.x.x..:....:.:......-..... 25M2D71M1D5M 72/101 71.3% 101/94230402 0.0% 3/101 3.0% 17278651 NA +3390 chr4 + 190214555 82222791 82222790 82222980 190 ATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATATACATATATGTGTGTATATATGTATATATATACATATATGTGTGTGTATATATGTATATATAAATACATACATA--TATATGTGTGTGTATATATGTATATATAGATAT chr4 - 94230402 40224621 40224620 40224793 54005610 54005609 54005782 173 ACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA-----------ATATAATTTGTTGATTCTGCATTCAT-------TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGT .::.:....x..x..-....x...:::.:....xx.x.x.:.::.xx::x.:.x.:x.x.........:.:............x.:.:........x:.-----------.....xx.xxx..xx.x..:..x:..-------..x.:.....x:..--..x....xxx...x.......x..:.:.x..:. 15M1D83M11D26M7D14M2I33M 112/171 65.5% 173/94230402 0.0% 21/171 12.3% 41998170 NA +3322 chr4 + 190214555 82222818 82222817 82222899 82 TGTGTATATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATATACATATATGTGTGTATATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---------ATATGTATA ......:...:x.:......x..::.:.x....:.xx........:.....:...x:...:.:.---------......... 64M9D9M 55/73 75.3% 73/94230402 0.0% 9/73 12.3% 44859778 NA +3064 chr4 + 190214555 82222824 82222823 82222905 82 TATATGTATATATAGATATATACATATGTGTGTGTATATATGTATATATATACATATATGTGTGTATATATGTATAT-ATATA chr4 - 94230402 64944135 64944134 64944217 29286186 29286185 29286268 83 TATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATGATATA ....x:..x...:......:..:....x....x.xx.:...x.x.x...x.::....::x.x..::.:.........-..... 77M1I5M 58/82 70.7% 83/94230402 0.0% 1/82 1.2% 17278689 NA +4039 chr4 + 190214555 82222836 82222835 82223020 185 TAGATATATACATATGTGTGTGTATATATGTATATATATACATATATGTGTGTATATATGTATATATATACATATATGTGTGTGTATATATGTATATATAAATACATACATAT--------ATATGTGTGTGTATATATGTATATATAGATATAAACATATATATGTGTGTGTATATATGTATACATAGATAT chr4 - 94230402 40224604 40224603 40224793 54005610 54005609 54005799 190 TAAACACACAAACTAGCACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGT-TGATTCTGCATTCAT-TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGT ..:.:.:.:.x.:xx.::::......x.xx..-...:x..:.:......:xx.x.x.:..:.xxx:x.:.x..x.x.........:.:....................::.:.--------..x...-..xx.x.::..x:..-..:.x.:....::.xx..x....xxx...x.......x....:.x..:. 32M1D80M8I6M1D15M1D49M 118/182 64.8% 190/94230402 0.0% 11/182 6.0% 41998232 NA +3553 chr4 + 190214555 82222846 82222845 82222930 85 CATATGTGTGTGTATATATGTA-TATATATACATATATGTGTGTATATATGTATATATATACATATATGTGTGTGTATATATGTAT chr4 - 94230402 70982596 70982595 70982681 23247722 23247721 23247807 86 CATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .....:.:.:.x...x:.....-:x.x.x.x.x.:.:.........:.:....:....:.x....x.........:...:.:::.. 22M1I63M 60/85 70.6% 86/94230402 0.0% 1/85 1.2% 11240250 NA +3619 chr4 + 190214555 82222846 82222845 82222963 118 CATATGTGTGTGTATATATGTATATATATACATATATGTGTGTATATATGTATATATATACATATATGTGTGTGTATATATGTATATATAAATACATACATATATATGTGTGTGTATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACAT--------ATAAATACGCCCACAGAGACACACATGTATA .:.:..::..::...x:..::.:.....:...x.x:::..x...:...:.....x:..:..:x:...:....x...:..--------........::x..:.x.x.::::::...... 79M8D31M 69/110 62.7% 110/94230402 0.0% 8/110 7.3% 9101746 NA +3096 chr4 + 190214555 82222945 82222944 82223023 79 ATATATATGTGTGTGTATATATGTATATATAGATATAAACATATATATGTGTGTGTATATATGTATACATAGATATATA chr4 - 94230402 86633730 86633729 86633808 7596595 7596594 7596673 79 ATATGTACTTGGAAGTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATAAACAAAGTTATA ....:..:x..x:x..x.x.:...x...:..x....:..:x.:.::..........x....x.....x.:.:.xx.... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% -4410785 -89819617 +3365 chr4 + 190214555 82240420 82240419 82240560 141 AAAGAAGAGAGGGAGAGAGAGAGAGAGAGAGAAAAGGAAG----GAAGAGA------GGAAGAGAAAAGAGAA------AGAAAGAGAGAGAGGAAGGAAGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAG-AGCAAGGGAGGGAGGG chr4 - 94230402 42084012 42084011 42084169 52146234 52146233 52146391 158 AAAAGGGAGTAGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAAGCACAAATGGGTGGG ...:::...x:.:..x.::::.......:....:.::...----...:...------x.:x.x.x....:...------..:..xx..x...:...x:.x.....xx.:.x.xx.:..:...:......:.:.:....:..-....x:::x...x... 40M4I7M6I16M6I62M1I16M 92/141 65.2% 158/94230402 0.0% 17/141 12.1% 40156408 NA +4250 chr4 + 190214555 82240453 82240452 82240594 142 AAGGAAGGAAGAGAGGAAGAGAAAAGAGAAAGAAAGAGAGAGAGGAAGGA---AGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAGCAAGGGAGGGAGGGAGGAACGAAGGAAAGAAAGAAAG-AGAGAAATGGA chr4 - 94230402 44053989 44053988 44054134 50176269 50176268 50176414 146 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGA ...:.x...:....:::.:.::..:....x.::..:.x:.:....x:..x---::..........:.::x..:..x...x.x:..::.x.......:...x.x.::::x..:x.:.::......::..:..:..-..x..:.::.. 50M3I81M1I11M 87/142 61.3% 146/94230402 0.0% 4/142 2.8% 38186464 NA +3139 chr4 + 190214555 82240484 82240483 82240543 60 GAAAGAGAGAGAGGAAGGAAGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ......:...x:..::..::.:.::..:::.......::.............x.x.:... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 5054407 NA +3305 chr4 + 190214555 82240647 82240646 82240729 83 AAGGAAGGAGGAGGGAAAGGAAGGAAGGGAGGGAGAGAAAGAGAAAGAAGAAAGAAAGAAAAGACGAAAGAAGGAAAGAAAGA chr4 - 94230402 79555903 79555902 79555982 14674421 14674420 14674500 80 AAGAAAAATTGAGGGAATGGGGGG---GCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAGAATGTAAGAAAGA ...:..::xx.......x..::..---.x........::.....:.:......:...:...:x:.xxx....x.x........ 24M3D56M 57/80 71.2% 80/94230402 0.0% 3/80 3.8% 2684744 NA +3120 chr4 + 190214555 82282392 82282391 82282468 77 GGCACAAAAATGGAGAATGAAAAAAATGGAGGAGGAGGAAGGAGAGATGGAGGAAGAAGAGAGTAAGACAGAAAAGC chr4 - 94230402 57306037 57306036 57306113 36924290 36924289 36924366 77 GGCAAAATACTGACAAATTAAATAAACAGAGGAGAAAGAGGAGGAGGAAAAAAATAAAGAGACAAAGACAGGAAAGC ....x..x.x..:x:...x...x...::......:.:..:.::...:x::.::.x:......xx.......:..... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 24976355 NA +3260 chr4 + 190214555 82307944 82307943 82308017 74 CTGCAACCTCTGCCTCCTGGGTTCCAACAATTCTCATGCCTCAACCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:........x.:::x...x..x.x....:...::::.........:......x.:.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 64110818 NA +3060 chr4 + 190214555 82309256 82309255 82309298 43 TCTGAGATTTGCCTTTTTTTTTTTTTTTTTTTTTTTTGAGACA chr4 - 94230402 29061400 29061399 29061442 65168961 65168960 65169003 43 TCTTAGATTTGCCTTTTTTTTTTTTTTTTTTCCTTTTAAATCA ...x...........................::....:.:x.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 53247856 NA +3012 chr4 + 190214555 82324617 82324616 82324681 65 TAACAGGAACACATCAGTTTTTGGTTTTTTTTTTTTTTTTTTCAGAGGGAGTCTCACTCTGTCAC chr4 - 94230402 86233471 86233470 86233535 7996868 7996867 7996932 65 TGACATGGGCTCACTGATTTTAGGCTTTTTTTTTTTTTTTTTCAGTGCAAATCTCAACCTTACAC .:...x.::.x..::::....x..:....................x.x:.:.....x:..xx... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% -3908854 -90321548 +3047 chr4 + 190214555 82330608 82330607 82330661 54 AAAAAAAAAAAGAAAGAAAAAAAAAGGAAAACTCAACACAAGAGGAGGACATTA chr4 - 94230402 85934331 85934330 85934384 8296019 8296018 8296072 54 AAAAAAGAAAAGAAAGAAAGAAAAAGGAAAATTGAAGTCAAAACAAAGAAACTA ......:............:...........:.x..xx...:.x:.:..x.:.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% -3603723 -90626679 +91736 chr4 + 190214555 82353815 82353814 82355406 1592 AAAGAGCCAATACATTTTTATACAAAAGGATTTATTAAAAAACCAGTAAGACACTACTACATCATGACACTGTCACACTGGGCTTTTAA-CACAAGACTTGCTCTACAATACTGGGGGAAAGGGCATAAAACACAAATTGATTCTGAAGCATAGCAATTAAGAAATAAAACAATGAAAGCAAATTTCTTTTAA-TGAGAACTCAGAATTAAACTTCAGAGGGACCCAACGTCATACTTCCA-TTCAGGGACTTGATACAAAAAATTTAGTTTGAACTGCTATTAGCAGGTGGCAGGAGCCACCTTCAAATGAATCTTCAAATTGGAAAATACTGCTTCACCACCTGGAGACAAAGAAGAAAAAATAGAAGTCACTCTGGGCAGGCT-ACAACACTTAACAAAAATTT----------------ACATAAAACTG------AGTTATCCCTATGTTCCACTATATGTAAATACTGTATA---ACATTAAATGTGTGA---TATG-TTTTATAAATTAAAGCTGAACAGTAGAGTCCATGAGCTGTAAATCCACATGTGCACCACTGGTTTAAGATGTG---------ATATGCT-----TTTAC----AAGTATTCTT-TAAAATATAAAAAGCTTTAAAGTATTTA-----CCCAAAGAACTCATAAAAAGGTCAATTTGGTAAAAGGACATTTT-GACCCAAGA----GCATCTAATATTTAAGCTTA------------TTTTATTGGATAAGCATATCTCTTGTCCATCACAAGTTATAGAAAAGTTATATACGACTAAAAGAAAAAGTTAT-----CTACTGTAAT-------------------TATAGGAAGTTGTCACAACAGGAATTCAGCTCAAGAACTTCTTGCAATTACTGCTACAACGTCTATAAATGGGAAAAGCAAGCATTAAAATAGATTAATAAAATATAAAATTAAGACTGGAAAATCCAGAGACAAGCTGTATCCTTAGAAGAATAAATAGTTAAAATTATTCAGTAAGCTGACGTATTTAACCATTACTGGGCCTGTAAAAAATGCATTAAAATTACATTACAAATAGTTTTTAAAAAGCAAAGAAATAAGTGAAGGCAAAGCTTGAAGTATCCATTTTATTTTATAATGCTGATACAGGATGTTGGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGTAGGCAATACTTTTTTGCTGCAATTCCTTAATTTGTACCCATTAGCAGTACTTTACCTGTTAACTTTACTGACTTGTTAATAATAGGACAAAAAGGCAAAAGCTTAAGAGCACCTGTGTTACATATCTTTGAAAGTCACTATGTTATAATATGGTAAGCACTTCTGGGTGCTGTGAAACTCTTAA--ATTAAGCATTGTTTTATGAACAATATAGATTATAAAAACTACTATTGTAAATGACAAAAAAAAAC--------TATTTTTAGAACATACCTGTTGGGGATAAGTTGCAAATGGAATAATTTAGTATGGTTTGTAGCTATTTTGATGACCACCTCGCCTGGATACCTTCCCATAACCACTCTGCTGGTCTAAA chr4 - 94230402 46353969 46353968 46355604 47874799 47874798 47876434 1636 AAAGAGCTGATACACGTTTATACAAAAAGATTTATTAAAAAACCAGTAAGACACTACTACATCATGACACCATCACACTGGGCTTTTAAACACAAGACTTGCGCTACAATACTGAGA-AAGGGGCATAAAACA--AATTGATTCTTAAGCATAGTAATTAAAAAATAAGACCGTGAAAGCAATTTTGTTTTAAATGAAAACTCA------AACTTCAGAGGGACCCAACGTCTTACTTCCAATTCATGAACTTCGTACAAAAA--CTAGTCTGAGCTGC-------AGGTAGCATGTGCCACCT-CAAATCAGTCTTCAAATGAGAAAATACTGCTTCTCCACCTAGAAGAAAAGAGAGGAAAA----AGTCATTCTGTGGAAGCTGACAGCAGGCAGATAAGTTTTTTTTTTGTTCTTATTAACAGAAAACTGCTTTTTAGATACCCCTACGTCCCACTCTACGTAAATATGGTATATCAACATTAATCATGTAAATATATGCTTTTTTAAATTAAAGCTGAACAGGAGAGTCCATGAGCTGGAAATCCACATGTGCGCCAATG-TTTAAGACAAGTTTTTCATCGTAAGCTGTAAATTTACTGAGAAAAATGCTTCTATCGTCTTAGACGTTACGAAACATCTATCATACCCGTAAACCACCACGAAAAACTATTCTGGTGGATGGACCTTTCCGGTCCAAAAAGTTGCATTAAAGAATTGTGCCGACCCACTATAGAGTATTATTAG------------CTTATCCGTTA--------AGAAAA------TACAACTAGAAGAGAAGGTTATATCAACTACTATAGTAGGATTGTGTTCAGAAGCTTAGGAGAAGTCGACACAACAGGAATTCAGCTCAAGAACTTCTTGCAATTACTGCTACAATGTCTATAAATGGGAAAAGCAAGCattaaaatagattaataaaatataaaattaaGACTGGAAAATCCAGAGACAAGCTGTATCCTTAGAAGAACAAA--GTTAAAATTATTCAGTAAGCTGACGTATTTAACCATTACTGGGCCTGTAAAAAACGCATTAAAATTACATTACATATAGTTTT--AAAAGCAAAGAAATAAGTGAAGGCAAAGCTCGAAGTATCCATTTTATTTTATAATGCTGATACAGGATGTTGGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCAAGGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGTAGGCAATATTGTTTCGCTGCAATTCCTTAATTTGTACCCATTAGCAGTACTTTACCTGTTAACTTTACTGACTTGTTAATTATAGGGC-AAAAGGCAAAAGCTTAAGAGCACCTGTGTTACATATCTTC-AAAGTCATTACGTTACATTACGGTAAGCACGTCTGGGTGCTGTGAAATTTTAAAGCATTAA-CAATAGCTTATGCA----GTAGATTTGAAAAATTACTATT---AATTACAAAATTAGGTTGCAGGTATACATGTGGGACATACCTGGTTGGGGTAAGTTGCAAACCGAATAATTTAGTATGGTTTGTAGCTATTTTGATGACCGCCTCGCCGAGATACTTTCCCATAACCACTCTGCTGATCTAAA .......::.....:x...........:..........................................::.................-............x...........:.:-..:............--..........x........:......:......:..x:.........x...x......-...:......------......................x........-....x.:....x:........--:....:...:....-------....:...x.x.......-.....x.:.........x:..............x......:..::x.....::::....----.....:....x.x.:...-...:..xx:.:xx..:x...----------------...x.......------..x..:.....:..:.....x..:.......:x.....---.......x::...:.---....-....x..................x...............x..............:...x..-.......::x.---------:..x...-----.....----..:x..x...-..xx:.x.x.:.x.:.x::..::..:..-----...:x.:.x.x.xxx:...::::.x.:....::.x....x...:-.::....:.----....:x..x.x..:x..:x.------------.x.....:.------------...:...:.:.--------......------...:....:....:..:.....-----.....:..:.-------------------..x::.....:.x..............................................:.............................................................................................:...--......................................................:...................x........--..............................:......................................................................................................................................................x.......................................................:.x...:.................................................................x.....:.-.......................................:-.......:..:....:.x..:.........x................:.:.x..--.....-..x.:x:.....x.----:......xx.....:.......---...x......xx.:::--------..:x.x.:.:.........x.x...:...........:x.....................................:.......x:.....:....................:...... 89M1I27M1D15M2D58M1I10M6D31M1I21M2D14M7D18M1D59M4D18M1I20M16I11M6I38M3I15M3I4M1I61M1D11M9I7M5I5M4I10M1I28M5I44M1I9M4I20M12I9M12D11M8D6M6D22M5I10M19I157M2D83M2D317M1D40M1D54M2I5M1D14M4D22M3D16M8I119M 1333/1528 87.2% 1636/94230402 0.0% 172/1528 11.3% 35999846 NA +14960 chr4 + 190214555 82354632 82354631 82355403 772 AAATGGGAAAAGCAAGCATTAAAATAGATTAATAAAATATAAAATTAAGACTGGAAAATCCAGAGACAAGCTGTATCCTTA----GAAGAATAAATAGTTAAAATTATTCAGTAAGCTGACGTATTTAACCATTACTGGGCCTGTAAAAAATGCATTAAAATTACATTACAAATAGTTTTTAAAAAG--CAAAGAAATAAGTGAAGGCAAAGCTTGAAGTAT-CCATTTTATTTTATAATGCTGATACAGGATGTTGGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCGTACCCTGTCCGCATTGAGCGGGCCT-GTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGTAGGCAATACTTTTTTGCTGCAATTCCTTAATTTGTACCCATTAGCAGTACTTTACCTGTTAACTTTACTGACTTG-TTAATAA------TAGGACA--------AAAAGGCAAAAGCTTAAGAGCACCTGTGTTACATATCTTTG----------------AAAGTCACTATGTTATA-----------------ATATGGTAAGCACTTCTGGGTGCTGTGAA-------ACTCTTAAATTAAGCATTGTTTTATGAACAATATAG------ATTATAAAA------ACTA------CTATTG-----TAAATGACAAAAAAAAACTATTTTTAGA--------------ACATACCTGTT-----GGGGATAAGTTGCAAATGGAATAATTTAGTATGGTTTGTAGCTATTTTGATGA---CCACCTCGCCTGGATACCTTCCCATAACCACTCTGCTGGTCT chr4 - 94230402 46363192 46363191 46364022 47866381 47866380 47867211 831 AAAAGAAAAAAGCAAGCATTAAATC---TTAA-ACAATGCACACTTAAAAT--GAGGTTCCACAATTGAAATACAACACTAAACAGAAGACCAAATGATTAAGCT------GTAA----AGGCATTTATGTACTTTAACTCCTGCAAAAAAC-CATTTAAGTTAAAG-ACACTTAGTCTCCAAAAAGATTAAAAAAA-----GAAGCCATAGTCTGAAGTTTTCCACTTTAATCTTTA-CGCTGGTACATGAAGTTGGAAGAGACCATACCACAGGACAGCGTTTTCTGGTGTATGC--CTTGCGCTCTGCCTGCAACGTGCGACCCCAGAGATAGACGTG--GTCAGGGTGACACACGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGAAGATAACA--TTCTTGTT----TTCCTTAAGTTGTACCCATT-TCAGTACTTTACCTGTTAATACTTCTAATAAGTTTAATTATTCCTCTAGATCACCTGGTACACAACGCAAAA-CAGAAAAACTCTTATGTT-----TTTCTGAGGTACTAAAGAAGATAAAGTCACGTTTTTACAAAGTTAAAGATCTATAGACACGGTAGGCAAAGCTGGTTTTAAAAAAAAAAGGTATTTTTAAGTTAACAAAAGTTTAATTAAAGAAAAAAAGTCACACTACACAACGTCTTACTCATTTGTCTATTGATCTTTAAATTAGATCAGCATACTGTGAGTGGGCCTCGCGCTCATGTACACACCTGTTTCCTCAGGGACAAGGTAC--------TGCTTTAGTATGGCTGGTAGTTGTTTTGGTGATTGCCGCCACCACGGGACGCCTTTCCGTACGTGCTTTGTTGGCCT ...x.::................x:---....-.x...::.x.x....:.:--..::x....x.:x::.:x.::.x.x:..----.....x:....::....:x.------....----.x.:.....xx:.:.x:x:xx....:......:-....x..:...x.x-...xx....:.::......--:...:...-----....x..x..::......x.-...:....x.:.x..-:....:....x..x...................x.x.:....:..:xxx:.:..:x..--..:.::.:...:.:...x:.x...:x..:-.x..x.:x....--.....x.:......x........................................................x..::..:.--..:...:.----........x...........-x..................:x:.x..:.:xx.-.....x.------...:x..--------.x..x......-.xx..:.:.x.:.:....-----.:.:..----------------........xx.x...:.-----------------.:.:....:...xxx....x.x:x:x:..-------.:.:....:....xx.xx....x..x..x:.x.x.:------.:..:.x..------...x------......-----.....x.x.xx.:x.x...:.xxx.:.:--------------...:.......-----:....:...x.:.--------.:x..........:.x....:.:.....:...---..:..x.xx.x...::....:..:..xx::..:..:...:.. 25M3D4M1D18M2D28M4I20M6D4M4D33M1D14M1D19M2I8M5D20M1I15M1D58M2D29M1I12M2D80M2D8M4D20M1D32M1I7M6I7M8I11M1D18M5D6M16I17M17I29M7I36M6I9M6I4M6I6M5I28M14I11M5I13M8D32M3I42M 515/723 71.2% 831/94230402 0.0% 157/723 21.7% 35991440 NA +19764 chr4 + 190214555 82356501 82356500 82356910 410 TCAAATAGCAG---TTAATATAAAAAGTATAGTACTTACTGCTATAATCACCATATCCATAGTAGTTGTTGTAACCAGTGTAGTCATATCCTCCATAACCACCGTAACCTTGGCTGTTATATCCATAGTTGCCATAGCCTTGATTCCAATAGTTACTATATCCCTGGTTCCAGTTTTGACTGGGGCCTGCAGCACATTAATAGGTTCACTA-AAGTCAGAAGATCAGCAAAGAT-CTTTACTTCAGGATAATTAAAAAGCAGAAAAGCTTAAGATAGAGTAAACTTAGGCTCTAGCTTACCACCACCTCTTCCACGAGCTCTTCCTGCAAATCCTCCTCTAGATCCCCACTGTTGCTGTTGCTGATATTGTTCCTTCGACATGGCTACTTTTATTTCACACTAAAAGAGAAAAAT chr4 - 94230402 46356456 46356455 46356851 47873552 47873551 47873947 396 TCTAATAGCAGGGCTTTTTCTAAGAAGTTCAGTACTTACTGCTATAGTCACTGTATCCGTAGTAGTTGTTGTAGCCCGTGTAGTCATATCCTCCATAACCTCCGTACCCTTGGCTGTTGTAGCCATAGTTCCCATACCCCTGATTCCAGTAGTTGCTGTAGCCCTGGTTCCAGTTTTGACTGGGGCCTGCAACACA-------GCGTGCCACAACTCAGCAGTGCAGGAGACTTGCTTTCACTCAAGCGAGCCCTCTGCCTTCTACTCCCACGCCAGCGCAAA------------CTTACCGCCGCCTCTTCCTCGAGCTCTTCCCACAAACCCTCCTCTGCTCCCCCACTGCTGCTGCTGCTGGTACTGTTCCTTTGACATGGCTACTTTTATTTCACACTGGAAATGGAAAGT ..x........---..xx.x...:....x:................:....::.....:..............:..x.......................x.....x...........:..x........x.....x..:........:.....:..:..x..............................:....-------.:x::.:.-..x....x..xx...x.:.xx.-....xx:...:.xx.:::xxxx:x.xxxx.xx.::.x.x:..x.:...------------......:..:........x...........::....:........:xx:........:.....:.....:..:........:.........................::..:x.:...:. 11M3I182M7D8M1I22M1I48M12D120M 304/391 77.7% 396/94230402 0.0% 24/391 6.1% 36000045 NA +6686 chr4 + 190214555 82356531 82356530 82356690 160 ACTTACTGCTATAATCA------------CCATATCCATAGTAG---TTGTTGTAACCAGTGTAGTCATATCCTCCATAACCACCGTAACCTTGGCTGTTATATCCA------TAGTTGCCATAGCCTTGATTCCAATAGTTACTATATCCCTGGTTCCAGTTTTGACTGGGGCCTGCAGC chr4 - 94230402 46365099 46365098 46365279 47865124 47865123 47865304 181 ACTCACCACTGTAATCTGTGTATCCCGGTCCATATCCGTAATTGGGATAGTTGTACCCAGAGTAGTCGTATCCTCCGTAGCCGCTGTAGCTTTGATCACTGTAAGCACTATTGTAGTTCCCATATCCTTGATCGTAATAGTTATTAAATCCTTGATTCCAGTTTTGTCCCTGACCTGAAAC ...:..::..:.....x------------........:..:.x.---.x......x....x......:........:..:..:.:...:.:...:::::.:..xx..------.....x.....x.......:x:........:..x....:..:...........x.:xx.:....x.:. 17M12I15M3I60M6I68M 118/160 73.8% 181/94230402 0.0% 21/160 13.1% 35991432 NA +11109 chr4 + 190214555 82357307 82357306 82357450 144 ACTTACTTTACTAAGACCAACATTGTGGTATTTCTTTTCCATTATCTTCTTCACTGGTTCTTCTTCCTTAAAGGTAATAAAGCAGAACCCACGCCTCTTATTGGTCTTGTTGTCCATGGGGAGCTCTATGGATTCCACCTGGTA chr4 - 94230402 46357743 46357742 46357886 47872517 47872516 47872660 144 ACCTACTTTACTAAGCCCAACATTGTGGTATTTCTTCTCCATGATTTTCTTCACTGGTTCCTCTTCCTTGAAGGTAATGAAACAGAATCCACGCCTCTTGTTAGTTTTGTTGTCCATGGGAAGCTCTATAGACTCAACCTGGCA ..:............x....................:.....x..:..............:........:........:..:.....:...........:..:..:..............:........:..:..x......:. 144M 126/144 87.5% 144/94230402 0.0% 0/144 0.0% 35999564 NA +22746 chr4 + 190214555 82358647 82358646 82359674 1028 TTTATAACATACCTCACCAAAACCACCAAAGTACTCCCTTATTTTCTCTTCAGGTGTATCTGGAGAAAGGCCACCAACAAAAATTTTTTTAACCGGCTCTTTTGTTTTCATGGCTTTGGCCCTTTTAGGATCAATCACCTTCCCATTCAATTTATGTTCTTTTTGATCCATGACCTAAGGAAATTGAAG------------TTTTCATTTAAAAAATATATATC---------TTAACTGAAGTTCAG--------AGAC----TATTAAC----TTACTTAAAA---ATAACTATAAATACAGATAATGCCAA----GCATATGTTGACTTGCTCAAGATTAA--ACTGTCAAGTCATGGTGGTGATGTAAC-----ATCAACTAACATATACTGTTTA-AATCTAAAGGTAAGAATGGTAGGACATACACAAATTTAACCAATTACTAGATA-----ACCATTACCT--TCAATATATACAAACATGACTGCTA-CTTCCCTTTAGCACTATATACAAACATAACTGCTAC--TTCC------CTTTAGCCCAGGA----TCAAAATAATGATTCAGTTAAAAGTTGCTTGCCTAA-------------CAAAATTTCAAAATATGGACTT----------------CTGTGAATTGCTAAAAC---ACATCCTTTTAACTAGGCATCTTT----------AAGTCTATAGTATCTTTA---AAGTTAATTTCAAAATTTAGCAGAGCC--------TGGAACACA---------AATTATTCAG-GAAATAATTCCTGAACC-----TACCTCTATCTTC----------ATAAAACGTATTGGGGCAAGAACTATTCTTCCTTCCTATACTATCA----AAATGGG----------GAACCACAAATAGGCAAACTCATTGTATCAAACTATCCATATGTTAATATTT------TATATTATTAACTGATCA-----GAACACG--------TAACACA----CTACCTTATCTACACTCTCCGATTCTTTAAATAGCACAAAGCCAAAACCCCTTGATCGCCCTGTGATAGGATCTAACTTCAGAGTGCAGTCTACAACTTCACCAAATTTGGAAAAGTAGTCCTTCAGATCTTTCTTTGTAGTGTCCCAGCTAAGGCCTCCTATAAACATTTTCCTGTAAAGACAAAAAGCAGTATTAAAATGCTTAAA chr4 - 94230402 46359049 46359048 46360239 47870164 47870163 47871354 1191 TTCACCATGTACCTCACCAAAAGCTCCAAAGTACTCCCTTATTTTCTCTTCAGGTGTATCTGGAGATAAGCCCCCAACAAAAATCTTTTTAACAGGTTCTTTTGTTTTCATGGCTTTAGCTCTTTTAGGATCAATAACCTTCCCATTCAGCTTGTGTTCTTTCTGGTCCATGACCTGTGGAAAATGAAAACAAGACCTTACTTGCAGTTCAAGCTATACACCTCATTGTGGTTTCAAACAAGGCTCAGTTTATTCCATACCTTTTGTTAATGCTATCACTTCAAGCGCAATATTTTTATTCCAGACACCATCTACTGTGCAAATCCAGAGTTCTTTGATTTTGATCACTGACA---CACAGTTCTAACACAGCCTTGCACCAGTAAACCAGAGCCACTTGTCACCCAAGGGAAATAAGGACATGGCATT------TCTCAGAAAGCACGAGACAGTCCCATCCTTCCCTCCTCAAAATTCATAAAGAAGAACATTATCTGTGCTCTACCACTGAAGACCAACAAAACTGACACACTTCCAGGGTACTCTATCACGAGCAATTTAGAAAGGCTGACACAGCTAATTTTTGCTTGAAGAAAGCCCAGATGCATCAAAACCTCTGACTCCGCTCCCAGTGCTCACCCTGCAGCTCTGGAACATGAAAACTCGATGCTCTTTCAAAGTTACTCCTTTCATAGCAGCAAAGTAGCAATTATTTTTATCCATATTAGTTTTCAGCTGCA--CGAGCCCAGTGGGTTGCAGCACGTTCTCCTGCAAGTACCCAAAGGCATACTTTAGGAAGCGCTGCTGCTCCCAGCTACTGTAGCATGACTAAGATGGTTTGGAAAGAAAACAATTC-------CTTAAGCATCATTTTAAATAGGCTCTATCCCAAAATCACCTGTAAAAGGTCACAT-ACAACAAATACTACATGTGTAATCACTTGAGTGCTATATCTTTA-CTGGCTACAATTTAACACGCTCTTTAATTACACAAATATTACCTTATCTACACTCTCCGATTCCTTGAAGAGCACAAAGCCAAAGCCTCTTGATCGCCCAGTGATGGGATCCAGCTTCAGAGTGCAGTCTACGACTTCACCAAATTTAGAGAAGTAGTCCTTCAGATCTTTCTTGGTAGTGTCCCAGCTGAGGCCACCAATAAACATTTTCCTGTTGAGACAAGAA----TGTTAATGTGATAAAA ..:.:x.::.............x.x.........................................x.:...x...........:........x..:....................:..:..............x.............::..:........:..:..........:x.....x....:------------..x:x:..:..:xx...:.:x..---------.:..x::.:.:....--------.x..----.:....:----.:....x..:---.xx.:.x.x.x.x....:.x:::.x.----...x..x:x..x..x:.::.xx..:.--....x..---..::..xx.:.:::.:.-----.:..::x...xx:x:.:::..:-x.:.:..:..x..x..x.::.x.:...x------.:.x.xx..x:..x...:.-----.:.x..x...--....x..x:.:...x.x..x:::..-..x:x..:..x....:x.x..x....x.....x:..--....------..:..x.x.::.x----.x:...x:x...:x...:...xxx.......xxx..-------------.....::..x:.x.x:.xx.::----------------..x..:.x:::x.....---.::::....:..xxxx:.x:....----------....xxxx.x...:....---.x:...:...:x.:x.x:.--x.....--------..x.:...:---------..x..::..:-.:x...x..:xx...x.-----.:.::.:.x..x.----------x...:.:.xx....::x:.:...x....-------..xx.x:....----....:..----------:..:...xx:..::x::x.x...-::.x....:xx.x...:...x.x:.:..------.....:x...-...:::.-----x......--------.x.....----:........................:..:..x..............:..:...........x.....:.....:.:..................:..............:..:.......................x..............:.....x..x................x:......:..----.:....x:..x.x... 189M12I23M9I15M8I4M4I7M4I10M3I26M4I26M2I7M3D17M5I22M1I28M6D19M5I10M2I25M1I36M2I4M6I13M4I36M13I22M16I17M3I24M10I18M3I19M2D6M8I9M9I10M1I17M5I13M10I28M7D11M4I7M10I23M1D28M6I10M1D7M5I7M8I7M4I188M4D16M 705/1004 70.2% 1191/94230402 0.0% 211/1004 21.0% 35999598 NA +8373 chr4 + 190214555 82358650 82358649 82358841 192 ATAACATACCTCACCAAAACCACCAAAGTACTCCCTTATTTTCTCTTCAGGTGTATCTGGAGAAAGGCCACCAACAAAAATTTTTTTAACCGGCTCTTTTGTTTTCATGGCTTTGGCCCTTTTAGGATCAATCACCTTCCCATTCAATTTATGTTCTTTTTGATCCATGACCT--AAGG---AAATTGAAGTTTTCA chr4 - 94230402 46366844 46366843 46367040 47863363 47863362 47863559 197 ACACCTTACCTCTCCGAAAGCACCGAAGTACTCCTTGATCTGCTCTTCAGAGGTATCCGGGCTCAGCCCACCAACAAACACCTTCTTGGGTGGCTCTTTCCCCTTGAGGGCCTTCGCCCTCTTGGGATCAATCAGCTTTCCATCCAGCTTGTGCTCCTTCAGCTCCAGCACCTGGAAGGCACAGGTTGAAGCCCTCA .:.x.x......x..:...x....:.........:.x..:.x........:x.....:..:xxx..x...........x.::..:..::x:........:x::..x.x...:..x.....:..:..........x...:....:..::..:..:..:..:x.x....xx....--....---.::......:::... 173M2I4M3I15M 137/192 71.4% 197/94230402 0.0% 5/192 2.6% 35991806 NA +7817 chr4 + 190214555 82359469 82359468 82359647 179 ACCTTATCTACACTCTCCGATTCTTTAAATAGCACAAAGCCAAAACCCCTTGATCGCCCTGTGATAGGATCTAACTTCAGAGTGCAGTCTACAACTTCACCAAATTTGGAAAAGTAGTCCTTCAGATCTTTCTTTGTAGTGTCCCAGCTAAGGCCTCCTATAAACATTTTCCTGTAAAG chr4 - 94230402 46367134 46367133 46367312 47863091 47863090 47863269 179 ACCTTCTCCACGCTGGCAGCGTCCTTAAAAAGCACGAACCCGAAGCCCCGCGACCTGCCGGTCACCGGGTCGGTTTTAATCGTGCAGTCCACAACCTCTCCAAAGCGGGACAGGTACTCGGTCAGGTCTTTCTTGCTCGTGTCCCAGCTCAGGCCTCCGATGAACATTTTCCTGCGAGG .....x..:..:..xx.x.xx..:.....x.....:..x..:..:....x:..:.xx..x..x.:x..:..x:x:..x.xx........:.....:..x.....x:x...x.:...x..xx....:........xx.x...........x........x..:............::.:. 179M 127/179 70.9% 179/94230402 0.0% 0/179 0.0% 35992335 NA +3189 chr4 + 190214555 82363020 82363019 82363072 53 TTTTATATATATATGTGTGTGTGTGTGTGTATATATATATATATATACATTTA chr4 - 94230402 19559279 19559278 19559331 74671072 74671071 74671124 53 TTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA .....xx...x.x.x.x.............:..................x:.. 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 62803741 NA +3075 chr4 + 190214555 82363022 82363021 82363054 33 TTATATATATATGTGTGTGTGTGTGTGTATATA chr4 - 94230402 27034825 27034824 27034857 67195546 67195545 67195578 33 TTATATATATATGTGTGTGTGTGTGTGTATATA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 55328197 NA +3281 chr4 + 190214555 82384190 82384189 82384245 56 TGGCAAAATAGTTACTACCTTGGATGACCAAGAAGTTGCTGCAATAGGATTATATA chr4 - 94230402 35131490 35131489 35131545 59098858 59098857 59098913 56 TGGAAACATAGGTACTACATTGGATAACCAAGAAGTATTTTCAATGAGATTATATA ...x..x....x......x......:..........xx:.x....::......... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 47252700 NA +3034 chr4 + 190214555 82387173 82387172 82387215 43 TTTGGGGTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTG chr4 - 94230402 27276683 27276682 27276725 66953678 66953677 66953720 43 TTTGGGGTTTTTTTGCTTTTTTTTTTTGTTTGTTTGTTTTTTG ...............:.....x.....xx..x........... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 55110490 NA +7483 chr4 + 190214555 82401555 82401554 82401701 147 CTGTCAGTGTTGTGGGAACATCAGCCCATGTTCTATCGGTTGCCATAGCCCCAAGGATGGGTGTCCTTCCAGTCATCCCACTCCAGAGCTCTGTAGAGTGTTTGTTCATCATCCTCTTCCTCCTTTTCTTCTTGATGTTCCTATTGC chr4 - 94230402 93033411 93033410 93033557 1196846 1196845 1196992 147 CTCTCTCTGCTTCTGGAGCATCAGCCCATGTTCTGCCTGTTGCCATAGCCTCTTGGGTGTGTATCTTTCCAGTCATCCCAGTCCCGAGCTTTTTGAAGAGCTTCCTCATCATCCTCCTCCTTTATTTTCTCCTGCTGCTCCTTCCGC ..x..xx..:.x:x...:................::.x............:.xx..:..x..:..:..............x...x.....:.x.::..x.:..x:...........:....::x...::..:..x..:....x::.. 147M 107/147 72.8% 147/94230402 0.0% 0/147 0.0% -10631856 -83598546 +3253 chr4 + 190214555 82401836 82401835 82401925 90 TTGGCTTGGGCCGTGTTCTGAGTGAGAATGAAGGGTTTCACTGGAGGCCTCTCCTGGTGAGATGAGTTAGAAGTTGATGCCTCCTGAAGA chr4 - 94230402 93034260 93034259 93034345 1196058 1196057 1196143 86 TTAGCCTGAGCTGCATCCCGGGTAAGAATGAAAGGTTTCAATGGAGTCCTGACTTGTCGAGAAGGACCGTGTGGTGGTG----CTGAAGA ..:..:..:..:.::.:.:.:..:........:.......x.....x...xx.:..x:....x.:::::x:x.x..:..----....... 79M4D7M 57/86 66.3% 86/94230402 0.0% 4/86 4.7% -10632424 -83597978 +7494 chr4 + 190214555 82401927 82401926 82402111 185 TCTCTTTCTCTCGGGATCTTTATTTCCTGGTCAATGTTCTCAATCTCTTCTAAGCTAATATCAATCCACCGCTGAAGGTGAAGAAGATAATATTCACAAACACGCTCATCATCTGCTTGACCACTTTCCACAGCAGGTTTCATTTCAGACAACCTATGCTCCAACTCCTTCTTCTGCTTGTATCT chr4 - 94230402 93035380 93035379 93035564 1194839 1194838 1195023 185 TCTCTGCTCTTCAAGATGACCATTTCCTGGTCGATGCTCTCTATTTCCTCAAAGCTGATGGTGATCCATTTCTGGGCCTGCAGTAGGTACAGCTCCCGTACTTGCTCCTCATCTGCCTGCCCACTCTCCACAAAGGTTCTCAAAGAGGCCAACTTGTTCTCCAGTTCCTTCTTCTGCTTATATCT .....x::::..::...xx::...........:...:....x..:..:..x.....:..:x::.....::x...::xx..x..x..:..xx::..x.:x..x:....x........:..x.....:......:x:.x.:...xxxx:.x....:.:.x.....::..............:..... 185M 123/185 66.5% 185/94230402 0.0% 0/185 0.0% -10633453 -83596949 +4033 chr4 + 190214555 82402340 82402339 82402556 217 AAACACTGGCACCACCAGGTACTTCAGGTCGGTGGAAGCAATCTCTTCCAAATCTTCATT-------------------------------------------------------------------------TCGGCTGAACAACT-CGAGCTGCGATAACATTTCGGCAGCCTTCTCAAGGAGATCCATCCAGGCCCTTGAACACCTTCTCCTGGACTATCCGGGAATCGGCA---GGTTCAGTCGCTACTTCTACTTCGTCCAGAATCTGTTTGCCGGTTTCCAGCAGCTC chr4 - 94230402 93037656 93037655 93037945 1192458 1192457 1192747 290 AGGCGCGGGCACCAGCAGGTACTTCAGGTCGGCCGAGGCGAGCTCCTCCAGCTCCTCGTTCTCACTGCAAAAGGAGAGATCGGCGTCACAGCCTCGATAGGCGCTGCCGCCACGGCACCGGCAACGAACGCAATCACCTGAACAGTTCCAAGCTCCTCCACCATGGCGGCCGCCCGCTGCAG----CGCGCCCAGCCCCTGCCGCACCTTGGCCTGCACGGACGGGGCCCCGGAGGACGGCTCGGTGCTGGCCTCCACCTCCTCCAGCAGCCGCCAGCCCGTCTCCAGCAGCTC .::.:.x.......x.................:x..:..:.x...:....:x..:..:..-------------------------------------------------------------------------..:x.......::.-.:....x.xx:.x...xx....x...:x..xx..----:x.::....x....xxx:......xx....x..x:x.x...xx:...x:---..:..:..xx:x:.:..:..:..x.....x.x.:.::x...x..:........... 60M73I14M1I34M4D49M3I56M 141/213 66.2% 290/94230402 0.0% 81/213 38.0% -10635316 -83595086 +3160 chr4 + 190214555 82410464 82410463 82410541 78 CTGTTGCTTTTTCTTTTCTTTCTTTCTTTTGTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 73032487 73032486 73032564 21197839 21197838 21197916 78 CTGTTGCTTTTTCCTTGCTGTTTTTCTTTTCTTTGTTTTGTTTTCCCATCTTCTCCTTGTCTATGTTCTCTATTATTT .............:..x..x.:........x..:x..:.x.:..:.:x.:..:.::..x.:.x.x..:.:.x..x... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 9377977 NA +3214 chr4 + 190214555 82410466 82410465 82410534 69 GTTGCTTTTTCTTTTCTTTCTTT--CTTTTGTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193302 40193301 40193372 54037031 54037030 54037101 71 GTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ....:..:x........:...:.--.....::..:.:xx:::.:x.................:.....::. 23M2I46M 50/69 72.5% 71/94230402 0.0% 2/69 2.9% 42217164 NA +3025 chr4 + 190214555 82410471 82410470 82410531 61 TTTTTCTTTTCTTTCTTTCTTTTGTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 60441035 60441034 60441095 33789308 33789307 33789368 61 TTATTCTTTCCTCTGTTTCTTCTGCCCTAGTATTATTTCTTTTTTCTTCTTTTTTTTCATT ..x......:..:.x......:..::..xx:x..x..........:..:........:x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 21969436 NA +61508 chr4 + 190214555 82424886 82424885 82426133 1248 AAAAACAAAAACAAAATACCAGTTAGATTTGTGCAACTCTGACAAGCTTTT-----AAAGGTCCACTTTCATGAATTGTTTTAAGTCCTCACTTTATTTTCTTCA--ATAATTAAAGATCATATGCATATTTATTGGTAAAATACA----GTTTGGGTAGTCAATAA--ACTCACCCTGGAGTTCCCAAATGACATTAAATTCAAATCTATTCAGGAAAGAATCTGGGAAT-ACAACCTTCCCATATTCAGAGGTTCAACTAT-----GCTAGATTAAGGTCTA--CTAGAAGCATCTCTAGTAA-------CCCAAGTAAAATGCTATCACAAACACCAAT--TTCTAATAAGTTTATTACAAGAACATA-----AATTGATC-TGTGCATATGATCTTTAATTTATATCCCAGATTTAAAAGTTCTTGTTTTGGTTTGTAGATTTCACTATTAGCTATAAAAAGAAAAA-GCAAGCATTAAATCTTAAAAGAATGAACACTTAAAATGAGGCTCCACAATTGAAATACAACACTAAACAGAAGACCAAAATGATTAAGCTGTAAAAAGGCATTTATGTACTTTAACTCCTGTAAAAAACCATTTAAGTTAAGTTTAGACACTTAATCTCCAAAAAGATTAAAAAT-GAAGCCAAAGTCTGAAGTTTTCCACTTTAATCTTTACGCTGGTACATGAAGTTGGAAGAGACCATACCACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGAAGACAACATTCTTGTTTTCCTTAAGTTGTACCCATTTCAGTACTTTACCTGTTAATAGTTCTAAAATGTTTAATTATTCCTCTAGACCACCTGGTACACAAAAGCAAACAGAAAAACTCTTAAGTTTTTCTGCAATACTAAAGAAAGTGAGATAAGACTTT---AAAGTTAAAGATCTATAGACACTTTAGGCAAAACAGGCTCATAAAGCAA---------TTAAAAAATCAACAATTTAGT---------AAAAACAGGCTACATAGTATTTTGTTTTTACGTTTCATTTGTCTATTGATCTTTAAATTAAATTAGACATTTCTACTGT-----TTTCCTGTACTCTTATACACACCTGTTTTCTC-----CAATGTTCTCCTTTAGTATGGCTGGTAATTGTTTTGGTGATTGCCACCCCCTCGAGATGCCTTGCCATAAGTGCTCTGTTGGCCTAT chr4 - 94230402 46362764 46362763 46364024 47866379 47866378 47867639 1261 AAAAATGAAGACAAATATATGGTCAGCTCTCTGCAG-GATGCTACCCTTTTCGTTAAAAGGTCCATTTTCATGAACTGCTTTAAGTCCTTTTTATATTCCTTTCGTCACCGTTAAAGATCATATGCATATTTCTTAAGGTAACACAAGAGGTTTTGTTACCTACTGATAATTTGTC------TTCCCAAATACTG------------CCATTCGGGAAGCTGTTCCAGAACGACACACATCCCA-ATTCGG----CTAATTATCGGGCTCTGGATCAGATTTTTATCTGGAAACACTGCCAAAAAGGGGTTTCCCAT------TGTTTGCACAGCCATCGTTCATACGGATAAACAGATCAGGTCGGTGTACTTCCAACAGTTCACGTGCATATGATCTTTAATGTCT-TTCCAGATTTAAAAGTTC--GTTTTGGTTTGCAGATTTCACTATTAGCTATAAAAAGAAAAAAGCAAGCATTAAATCTTAAAC-AATGCACACTTAAAATGAGGTTCCACAATTGAAATACAACACTAAACAGAAGACCAAA-TGATTAAGCTGTAAA--GGCATTTATGTACTTTAACTCCTGCAAAAAACCATTTAAGTTAA----AGACACTTAGTCTCCAAAAAGATTAAAAAAAGAAGCCATAGTCTGAAGTTTTCCACTTTAATCTTTACGCTGGTACATGAAGTTGGAAGAGACCATACCACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCTGCAACGTGCGACCCC-AGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGAAGATAACATTCTTGTTTTCCTTAAGTTGTACCCATTTCAGTACTTTACCTGTTAATACTTCTAATAAGTTTAATTATTCCTCTAGATCACCTGGTACACAACGCAAAACAGAAAAACTCTTATGTTTTTCTGAGGTACTAAAGAAGATAAAGTCACGTTTTTACAAAGTTAAAGATCTATAGACACGGTAGGCAAAGCTGGTTTTAAAAAAAAAAGGTATTTTTAAGTTAACAAAAGTTTAATTAAAGAAAAAAAGTCACACTACACAACGTCTTA---------CTCATTTGTCTATTGATCTTTAAATTAGATCAG-----CATACTGTGAGTGGGCCTCGCGCTCATGTACACACCTGTTTCCTCAGGGACAAGGTACTGCTTTAGTATGGCTGGTAGTTGTTTTGGTGATTGCCGCCACCACGGGACGCCTTTCCGTACGTGCTTTGTTGGCCTGT .....::..:.....xxxx::..:..x.:.x....:-xx..x:.xx.....-----.........:.........:..:..........:x:.x....:::...:--.:x:.....................x..::x:x..:...----....x.x..x::.x.:.--.:.:::.------.........:x::------------.:....:....:xx:.::x:...:-...xx.x.....-....:.----::..:...-----x..:...:.::x.:.x--..:...:..::x.:.:x..-------....x------..:.xx....:x..:.:x.--.x.x:....::xx..:.x:xx::::..-----..:x.x..-:..................x.x.-.:................--...........:..............................-...................x-....x...............:.....................................-...............--........................:...................----.........:...................x-.......x...................................................................................................:...............-........................................................................................:.....................................................x......x.x...................:..............x:xx.................x.........x::..........::.:.::.x.x::...---......................xx........:.x..:.:xx...:x..---------....:xx.x...x.:....:.---------...:x..x:.....:.:::.:..:---------:..........................:..:..-----:x......-----xx:.::.::...x.:.............:...-----...x..x..x.................:.................:..x..x..:..:.....x..:..x.....:.........:. 36M1D14M5I49M2I39M4I17M2I7M6D13M12D24M1I12M1D6M4D8M5I16M2I19M7I5M6D19M2I27M5I8M1I23M1D18M2D42M1I20M1D58M1D15M2D44M4D30M1I123M1D246M3I49M9I21M9I24M9D33M5D8M5I32M5I87M 983/1192 82.5% 1261/94230402 0.0% 125/1192 10.5% 36062122 NA +16135 chr4 + 190214555 82425306 82425305 82426132 827 CTATAAAAAGAAAAAGCAAGCATTAAATCTTAAAAGAATGAACACTTAAAATGAGGCTCCACAATTGAAATACAACACTAAAC----AGAAGACCAAAAT---GATTAAGCTGTAAA--AAGGCATTTATGTACTTTAACTCCTGTAAAAAAC-CATTTAAGTTAAGTTTAGACACTTAATCTCCAAAAAGATTAAA--AATGAAGCCAAAGTCTGAAGTTTTCCACTTTAATCTTTA-CGCTGGTACATGAAGTTGGAAGAGACCATACCACAGGACAGCGTTTTCTGGTGTATGC--CTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGAAGACAACATTCTT--GTT----TTCCTTAAGTTGTACCCATT-TCAGTACTTTACCTGTTAATAGTTCTAAAATGTTTAATTATTCCTCTAGACCACCTGGTACACAAAAGCAAACAGAAAAACTCTTAAGTTTTTCTGCAATACTAAAGAAAGTGAGATAAGACTTTAAAGTTAAAGATCTATAGACACTTTAGGCAAAACAGGCT--CATAAAGCAATTAAAAAATCAACAATTTAGTAAAAACAGGCTACATAGTATTTTGTTTTTACGTTTCATTTGTCTATTGATCTTTAAATTAAATTAGACATTTCTACTGTTTTCCTGTACTCTTATACACACCTGTTT--------TCTCCAATGTTCTCCTTTAGTATGGCTGGTAATTGTTTTGGTGATTGCCACCCCCTCGAGATGCCTTGCCATAAGTGCTCTGTTGGCCTA chr4 - 94230402 46354830 46354829 46355602 47874801 47874800 47875573 773 CTATAAATGGGAAAAGCAAGCattaaaa--tagattaataaaatataaaattaaGACTGGAAAATCCAGAGACAA-GCTGTATCCTTAGAAGAACAAAGTTAAAATTATTCAGTAAGCTGACGTATTTAACCATTACTGGGCCTGTAAAAAACGCATTAAAATTACATT---ACATATAGTTTTAAAAGCAAAGAAATAAGTGAAGGCAAAGCTCGAAGTAT-CCATTTTATTTTATAATGCTGATACAGGATGTTGGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCAAGGAAGTTCCCGCTGGCGGGTACAAACAAGGTATAATGTCAGAGTTAGTAGGCAATATTGTTTCGCTGCAATTCCTTAATTTGTACCCATTAGCAGTACTTTACCTGTTAACTTTACTGACTTG-TTAATTAT-----------------------AGGGCAAA-AGGCAAAAGCTTAAGAGCACCTGTGTTAC---------------ATATCTTCAAAGTCATTACGTTACAT-TACGGTAAGCACGTCTGGGTGCTGTGAAAT-TTTAAAGCATTAACAAT-----------AGCTTATGCAGTA----GATTTGAAAAATTA-----CTATTAATTACAAAATTAGGTTGCAGGTATACA--------------TGTGGGACATACCTGGTTGGGGTAAGTTGCAAACCGAATAATTTAGTATGGTTTGTAGCTATTTTGATGA---CCGCCTCGCCGAGATACTTTCCCATAACCACTCTGCTGATCTA .......x:.:................x--..:.xx...:..xxx.x...x.:..:..xx.x...:x.:.x....-:..:x.:----......x....:.---:....xx.x....:--:.x.:.....xx:.:.x:x:xx............-....x..:...x:..---...:x..:.:.:x...:x:.xx...--.:.....x.....:::.....x.-...:....x.:.x..-:....:....x..x...................x.x.:....:..:xxx:.:..:x..--..:.::.:...:.....x:.x...:x..:xx....xxx::.x:.....x.:......x.........x..............................................x..:...:...x..--.:.----........x...........-x..................:xx.x..:.xx..-........-----------------------.::.....-..:x...xx......xx:x:...::x...---------------.x:x...:.....:.xx:xx:..:.x-:..xx..:...x:x.x..x.--::.:..::-x.....:x..:......-----------..x:..:::....----.x...x.x:xx.:.-----.....:..:x:x......::..:x.x:.x.x:.--------------.x.x:x...:.....x..--------.:x.x..:xxxx.xx..........:.x...::.:.....:...---..:..:.x:......:.:..x......x::.....:..::... 28M2D45M1D7M4I13M3I14M2I34M1I15M3D25M2I23M1D15M1I58M2I128M2I3M4I20M1I32M1D8M23D8M1D29M15D26M1D20M2I8M1D17M11D13M4D14M5D33M14D18M8I44M3D43M 510/741 68.8% 773/94230402 0.0% 118/741 15.9% 36070476 NA +33573 chr4 + 190214555 82426458 82426457 82428448 1991 CTTACCACTGTAGTCTGCATATCCCTGTCCATATCCATAGTTCCCATAGTTATACCCAGTATAATCATATCCGCCATAGCCACTATAGTTTTGATCACCACCATAGGCACTATTGTAATTTCCATATCCTTGATCATAATAGTTATTAAATCCTTGGTTCCAGTTTTGGCCCTGACCTGAAACAATGCACAATGATTGTTAGGAAACAACTTCTG--ACC--CCCAATTCTAACATA---------------------------------AAATGATGCGTTCTTGTCTCTCACTCTGCA---------------------------------------AATCTTAAAGGGC-----AGAATGGACATATATATT----------------------------------GCTA--TCTGCTT----------------GAAAAACTA----------------------------TTTTTCCAGCT------------------GTTATAAAAAAGGAG-----GCAGAAAGTCCAATTGTGCCAGTATCAAACT---------TCCTAAACTTAATG------GAAAATCATT---------CAATT------TTCCATTAAAGCCGAAGACAGGTACACTGTTCTGTTTAAAACAAG--------GACTCCTGCCCAAGAA----------AACCTATCACACCACGGTGTATC--------------ATGTAATGGTACACTTTTCCTATCAGTGATGACAC------------TAATTGTCAAAGTGGCCACACTTTTAACAGTTTTTTGAAACCAGTGAGCTCACAAC---AAAAAACCACCACACACAACCTC--------------CACTAAGCTGAACAGTCCCCCCTCCGCTGGAATGGTTTTAAGTTTAAAGTTTTGCTTTGGTACAGGACTACTCATATTCAGCAGTATACAGCTTAAATAAACCACGGAGTCATATTTCAAGAATT-----------AAGTCTCACCTCGGCCACGACCCCTCGTACCACCTCGTCCACCAGCTGCAGCACCTCTTCCACCTTTTTGTTGTTGCTGTTGCTGCCTATATACCTCTTTGGGTTGTGCAACTTTGATTTCACACTAT--AAACAAAAAACATGAAAGTATAATTTTTACC---GAAGTTCTAAAATTAAATCATTTTATTTTTCTCCACATCAAGAAAT--------TATTTCAATTATTTAAATTTTCATTTAAAGTGCTTAAATGGCTTTACCTTCCCAGAACCAATTTGATGGTATCTGCTTTCTAACAATTTTTTTACTGGCTCTTCATCAGTATATGTGATAAAACAAAATCCTCTTCTTTCATTTGTTTTTGTATCCATGGGAAGTTCAATATTTTCAATCTGAAATCGAGATGCACACTCAACGTCATCCCATAATTGTAAAACGTTACAGTGTCAGAATGCCAAAGGCCTTTTCAGGCTTCAACTTAAACATGTTATTCTTATCGGGTGACTTCTATACAGACATCACTGCTTTATGATCAACATCAGCCTACAGTGATTTGTTGTATATTTGAAGCATTGAGAGAAATTAATATTATTTTGTACCCAAAGATGCCACTAGTTAACAAGTCCAAACACTGACCACATTTAA--GTGCCCATGTT---------TTAGCTAA-------ATTAGATAGTTGGGTTTCCATCAGAGCAGCAATGAAATCAAGGTA-CAGTCACTGGAAGCGACTTGAGCAGTCATTTAATTCTACTCTTACAG--------------GAAACATGAATCTGCCCTGCATAAATCGGACAAGGATTGAACATTTTATAAACACATCAAGCTTAACATGTGTAAACATAATCACAC---ACCTCTCCAAAGGCTCCAAAATATTCTTTAATTTGTTCTTCAGAAGTATCCGGGCTCAATCCACCCACAAAAACCTTTTTGGGAGGTTCTTTCCCTTTTAAAGCTTTGGCCCTTTTGGGATCTATCAATTTGCCATCCAGTTTGTGTTCTTTCAGTTCCAAAACCTACAAG--ACAGATTTATTTAATCTGA---------CAGCACCATATAACCCCCAGAAAAATTTGCAAAACACCACAAAAG-----------------CAGCACAATGCAAAACATAGTTCCTACCTTATCAACACTAGCAGCATCTTTGAAAAGCACAAATCCAAATCCTCTTGATCTCCCAGTGACTGGATCTGTTTTAATTGTGCAGTCTACAACTTCCCCAAATCGAGACAAGTACTCTGTCAGATCTTTTTTGCTTGTATCCCAGCTCAAGCCTCCAATAAACATTTTACT chr4 - 94230402 46365100 46365099 46367306 47863097 47863096 47865303 2207 CTCACCACTGTAATCTGTGTATCCCGGTCCATATCCGTAATTGGGATAGTTGTACCCAGAGTAGTCGTATCCTCCGTAGCCGCTGTAGCTTTGATCACTG---TAAGCACTATTGTAGTTCCCATATCCTTGATCGTAATAGTTATTAAATCCTTGATTCCAGTTTTGTCCCTGACCTGAAACCAGGCACAGCATTTAATA----ACAACTTCTGTGACTATCCCAGTCTTCACATACCACTTCACCTAGCTCACTATTTTTCTCTTCCAAAATTAT---TACTTCCCTCCTACTTCCCACAGCAACCCACACGAACCAATTTGCTAAAATAACCGATCAATCTCATTTGGCTATCAAAGATGGACTGAAAGATCCAATCACTCAAAACCATATCAGATGAAAGAACACGCTAGTCCTGCTCATCAGCCACCCAGGAGGAAAGACCAAAAGCACGCACAACAGCAATTCCTGTACTTTTCCCAACTTCCATTTTTAAATCGTTAATTACACGAACAAAGTTCTAACACAAGATC--AGTTTGACTGCATCACCTTAGTTGTGGCTGCTTGACTTGGTGAATCCTGACACACATTAACCCGTGACAACTGCTGGCCTCTTTGCAAGGCGTTGACAAGCGACCATCTCTGT----AGCCAGTGGTTCGTGACTTCTCACCCACAAGCCAGCCAACATCCTCTCACACAAAAGGATAACTAGCTACACTAGAGATTTTACTATGCCCTTAGACTGTTGTTGCAGACCTACAGTTACGTTTTACTTGTCA------------TCTGAGCATTTGTATGCAAGCAGAGATTCTTTAACTTCCAAAACCTATCACA-AGAACCAAAGTGGAATTTAAGGCACTTAAGAAATTAATCCTTTTTAAGCT-----------AATTCTTAATTTTTTTTTT--------AAGTCCCACATGCAACCTGGAACAGCTTCAGACACCTTC--AATACTTTTACACAAATTCCCATAACCACAGCACTTACCCCGTCCACGTCCCCTTCCACCGCCTCGTCCGCCAGACGCATTGCTTTTTCCTCCTTTCTGTTGCTGCTGCTGTTGCCTGTACACCTCTTTGGGCTGCGCTACTTTGATCTCACACTGTTAAGACAAAAAGC------------CTTTCACTTGTGAAGAATTACAGGACCGTTCTGTCAGCTGCCTTCACGGAAGCCGACAGGCTGCCTATTCCACGTACT---------------AGTGAGAAAGCATCACTACCTTGCCTGAACCAATCTGGTGGTATCTGCTTTCTAGTAACTTCTTTACCGGCTCTTCATCTGTGTATGTGATAAAGCAGAAGCCCCTCCTTTCGTTCGTCTTCGTGTCCATGGGAAGCTCAATGTTTTCGATCTGCAATT-AGAAGTACG---------------TACCGGTGATGCATGAAAAT--CAACACGC----GACCTGCGCCAACACCTTCTGATGCACATT----TCGTCAGCTGTATT---TACAGCACGTTCTACTTGGTGTTCAACAACAG--TGCAGAAGT---------------GGCACTGAGGGACACGGTCAGTGGGCATGGGCTGGGGTTGGCCTTGGTCATCT--------CAGAGATCTTATCCAACCGTACCGGTGTTAGCATTCCGTTAGCTCATCCGCTCACGGCATGCTGCAGCTTTCACAACTTCTG--ATGCTAACAAGTTATCCCCCTCCAGCAGTA--CAGAGCTGTTAACCAACTGTGTTTTAACAACCTCTAGCTCCACAGAAGCCCAACTCGGCTCTCTGCGCTTGTTTTAAGGC---AACATTCCCTTGGAAAATGGCGTTTATC----TTACCCGGGGCCACACCTTACCTCTCCGAAAGCACCGAAGTACTCCTTGATCTGCTCTTCAGAGGTATCCGGGCTCAGCCCACCAACAAACACCTTCTTGGGTGGCTCTTTCCCCTTGAGGGCCTTCGCCCTCTTGGGATCAATCAGCTTTCCATCCAGCTTGTGCTCCTTCAGCTCCAGCACCTGGAAGGCACAGGTTGAAGCCCTCAGAATGCTGAGGCAGGCGTGTGTAGCACACAGCGAAGGACCCGAGGC-CCACGCACGGCCCTCACCCCCCCCTCCGACACGAGGCCCATC----CACGCACCTTCTCCACGCTGGCAGCGTCCTTAAAAAGCACGAACCCGAAGCCCCGCGACCTGCCGGTCACCGGGTCGGTTTTAATCGTGCAGTCCACAACCTCTCCAAAGCGGGACAGGTACTCGGTCAGGTCTTTCTTGCTCGTGTCCCAGCTCAGGCCTCCGATGAACATTTTCCT ..:.........:....::......x..........:..:..xxx......:.......x:..:..:.....x..:.....:..:...:.........::---..:...........:..:..............:....................:...........x..............x.x.....:::x..:x..----..........--..:--....:.::.x.....---------------------------------....x..---.x...x:...::...::x..---------------------------------------.....:.xxx...-----.::......xx.x.x..:----------------------------------....--:.....:----------------....:..:.----------------------------....:...:..------------------:...:.x:..x::..-----:..x..::..--.x.x..x.x.:....xx:.---------.x..x:....::..------..x.xx....---------...:.------:..:x.xx...x..xx....:.::xx.xx:.....----.:.x..--------....:..xx..x.x..----------.x...x......x.x:.x:..x.--------------..x.x.:x:.:.x...xxx..:.::x..xx...x:------------..x......------------.:.x.:..x..x.x..x..x...x..x:::x:...---x....x.:.:....-.x....xx--------------....x.:xx:.x:.:...::::.xx...-----------..x.:.x..x....x:...--------.xxx.:..:..x..:.xxx:x.......x.:xx.x.:x.--.:.xx.x..x..x:....-----------.:xx..:...:..x.....x.....:x:...:........:....x:...x::.:.:....x.....:.....:.....:..:.....:..:...........:..:..x........:.......:.--.:.......:.------------:...:..:---....xx:..x.:xxxx:.:x.x.:.x:.x:..:...:xx.:xx:.:--------....:..xx..:.---------------....xxx..:::x.x:......x..x........:..:................::..:..:.....:...........x..:...........:..:..x..:..:.....:..:..:..:..:...........:.....:.....:.....x...:-...x.:..:---------------..x:x..:.x:.:.x.x.:.--..:x.:..----.:...x:x.x::.x:.xx..x.x:..::..----.::..:.x..xx..---.....xxxx:x..:...x:..x......x...--.:...x::.---------------:...:....:..x.:x:x:.x.:xx:xxx:x.::::.x..x.x:.:..:.x.x--------..xx..:.x:..::..--..:..x:....---------......x.-------.:x:x..:x.xx:.:..:..:x.xxx.x.--...xx.x....x..-.xx:.x.::.x..::--:x....x..:.x::..:.x.::.:.x...:--------------...:.x::.x..x..:..x::::xx.xxxx:....x---......::x.x::x.x..x:x.:...x.----x..xx.:x:::.....---........:..:..x..:..:..:..:..:..:..:........:.............::.....x.....x.....:.....x..:........:..x.::..:..x.....:........x....::..x........:.....:..:.....:....:x....:x...--....:..x.xx:xx..x..---------...xxx::.:..:.x.x...x:..:xx:x.:.::.-....:x.x.-----------------.::...:.x..xx.x.----:x.x:.....x..x..:..:.....:..:..:........:..:..:..x..:.x:..:..x..:..x..:..:..x........:........:.....:..:.....x..:....:......x.....:.....:.....:..:..........:......:..:........x.. 100M3D98M4D10M2I3M2I15M33I7M3D20M39I13M5I18M34I4M2I7M16I9M28I11M18I15M5I10M2D19M9I14M6I10M9I5M6I35M4D6M8I16M10I23M14I35M12I9M12D35M3I14M1D8M14I28M11D19M8D39M2D18M11I128M2I11M12D8M3I46M8I13M15D159M1D9M15D20M2D8M4D30M4D14M3D32M2D9M15D53M8D16M2I11M9I8M7I29M2D14M1I15M2D30M14I36M3D28M4D16M3I171M2I19M9I35M1D9M17I16M4D178M 1234/1844 66.9% 2207/94230402 0.0% 510/1844 27.7% 36061358 NA +9175 chr4 + 190214555 82427972 82427971 82428181 210 TTTTATAAACACATCAAGCTTAACATGTGTAAACA-------TAATCACACACCTCTCCAAAGGCTCCAAAATATTCTTTAATTTGTTCTTCAGAAGTATCCGGGCTCAATCCACCCACAAAAACCTTTTTGGGAGGTTCTTTCCCTTTTAAAGCTTTGGCCCTTTTGGGATCTATCAATTTGCCATCCAGTTTGTGTTCTTTCAGTTCCAAAACCT chr4 - 94230402 46359008 46359007 46359224 47871179 47871178 47871395 217 TTCTGAAGACAGAACAAGTTCTACAAATACAAGCAGTTGATTTCACCATGTACCTCACCAAAAGCTCCAAAGTACTCCCTTATTTTCTCTTCAGGTGTATCTGGAGATAAGCCCCCAACAAAAATCTTTTTAACAGGTTCTTTTGTTTTCATGGCTTTAGCTCTTTTAGGATCAATAACCTTCCCATTCAGCTTGTGTTCTTTCTGGTCCATGACCT ..:.:x.:...x.x....:.:x...x:.::..:..-------.x.:..:::.....x.....:........:..:..::.x....x:.......:x.....:..:xx:..x..x..x.......:......::x.........:x:...:.x:.....:..:.....:.....x..x.x:..x....:...:............x.x....x:.... 35M7I175M 148/210 70.5% 217/94230402 0.0% 7/210 3.3% 36068964 NA +10321 chr4 + 190214555 82428265 82428264 82428463 199 ACATAGTTCCTACCTTATCAACACTAGCAGCATCTTTGAAAAGCACAAATCCAAATCCTCTTGATCTCCCAGTGACTGGATCTGTTTTAATTGTGCAGTCTACAACTTCCCCAAATCGAGACAAGTACTCTGTCAGATCTTTTTTGCTTGTATCCCAGCTCAAGCCTCCAATAAACATTTTACTA--GAAATAAAAGTGTT chr4 - 94230402 46360027 46360026 46360227 47870176 47870175 47870376 201 ACACAAATATTACCTTATCTACACTCTCCGATTCCTTGAAGAGCACAAAGCCAAAGCCTCTTGATCGCCCAGTGATGGGATCCAGCTTCAGAGTGCAGTCTACGACTTCACCAAATTTAGAGAAGTAGTCCTTCAGATCTTTCTTGGTAGTGTCCCAGCTGAGGCCACCAATAAACATTTTCCTGTTGAGACAAGAATGTT ...:.:x.x:.........x.....xx.x.xx..:.....:........x.....x..........x........:x.....::x:..x.xx...........:.....x......:x...x.....x..:x..........:...x.x..:........x.:...x..............x..:--..:.:..:.:.... 185M2I14M 153/199 76.9% 201/94230402 0.0% 2/199 1.0% 36068238 NA +9047 chr4 + 190214555 82429200 82429199 82429559 360 CGTGCGGCGCGCTGGGGGAGGGGGAGCGGGGGAAGAAGCG---------TGCGG--TACCCGTCATCCTGCTGATTCTTGCTCGCGTTGATCTTGGATCCCTCTGCGAATTCCTCTATATTGCTGTACTCGTTCATATCCTCCATAGTGACGGAGCTGTCGGCAGGGGGGTGCTGGCGCGCAGTCCGGGTCGCGGCAGCAGCGGCGGCGGAGCGTTGTATGGAGCTGGATTTAAAATGGCGGCGGAAGAGATCCGGGCGCCGCCTGCGCCCTCCCTTTATAGCCGCCCCGCCCGCCAATCGG--------GAGGGCTGCTG-----------GGCGGTGACGTGGCGCTGGGCCCGGCGCGCCCCCTGCCGGGCGGAGCTGGGAGCGAGC chr4 - 94230402 46367488 46367487 46367836 47862567 47862566 47862915 349 cACGCGGCCGGCAGAGATGGGGGGTGGGGGTGAGGGCGCGACTCCACCTCGCAGCCTACCCGTCGTCCTGCTGGTTCTTGCTGGCGTTGATCTTGGAACCTTCGGCGAACTCCTCCGCGCCGCCGCTCATCTCCGTGGCGTCCTCCATGGCGGGGCGGCTA--AGAGCGGTG---------------------------AGCGACGGAGACCCGC--------GCGGGGTAGAAAATGGCGGCGGAAGAGATCCGGGCACCGCCTGCGCCGCCTTTATATAGCGGCGAAGGCAGCCAATCAgcgccgcccgggggacgctgcagcgcccccctgcggcggcg----gcggcgccacccgcgcTCTCCGCTGGCCGCCGCCATGGGCGTGC .::.....xx..x.:.:x:.....x.x...x..:.:x...---------:..:.--........:........:........x..............x..:..x.....:.....::::::..:.:x.x:x.:.:.:x.x...x:x:..:...:..x.:::--..:.x....---------------------------....:...x.:xx..:--------..x..:.xx..........................:...........x:.::.x......x..xxx.x.x.......:.--------.:...x:....-----------x....:.:..----..x.x...xxx.....:.:.:..:..x..xx..::x.:...x.. 40M9I5M2I105M2D9M27D16M8D79M8I11M11I10M4D44M 220/319 69.0% 349/94230402 0.0% 71/319 22.3% 36061712 NA +6064 chr4 + 190214555 82447915 82447914 82448032 118 TCCAGGACATTTTATTTCCTTACATCGAAGAAAATGTTAAAGAGTATCTGCAGACACATTGGGAAGAAGAGGAGTGCCAGCAGGATGTCAGTCTTTTGAGGAAACAGGTTGGGACATT chr4 - 94230402 46368467 46368466 46368584 47861819 47861818 47861936 118 TCCAGGAGACCCTGTTCCCCTACATCAGGGACAACGTGGAGCAGTACCTGCGCGCGCACTGGGAGGAGGAGGAGTGCCAGCGGGACGTGGGGCTCTTGAGGCAGCAGGTGAGGGCATT .......x.:::.:..:..:......:::..x..:..x:.:x....:....:x:.:..:.....:..:.............:...:..x:.x..:......x.:.....x:..:.... 118M 83/118 70.3% 118/94230402 0.0% 0/118 0.0% 36079448 NA +8987 chr4 + 190214555 82451041 82451040 82451251 211 AGGCTGAAGAGGACGCCCACCTGGATGGGGCTGTTCCTATCCCTGCAGCATCTGGGAATGGAGTGGATGATCTGCAACAGATGATCCAGGCCGTGGTAGATAATGTGTGCTGGCAGATGTCCCTGGATCGAAAGACCACTGCACTCAAACAGCTGCAGGGCCACATGTGGAGGGCGGCATTCACAGCTGGGCGCATGAAAGCAGAGTATGT chr4 - 94230402 46368647 46368646 46368857 47861546 47861545 47861756 211 AGGCCCAGGAGGATTCGGGCCTGGACGGAGCAGTGCCGATCCCGTTGGAGAGCGGCAGCGGGGACGAGGAGCTGGAGCGCGTCATCCGGGCAGTGGTGGACAACGTGCACTGGCAGATGGCCCTGGACAGGAAGACCACGGCGCTGAAGCAGCTGCAGGGACACATGTGGAGAGCGGCCTACGCCACGGGGCTGGTGAAGGGAGAGTGAGT ....:x.:.....:x.xx:......:..:..x..x..x.....xx::.x:xx:..x.::..:.xx..x..x...x.:.:x:.x....:...x.....:..:..:...::..........x.......:x.:........x..:..x..:...........x...........:.....x.x.:.x:.x....xx:....:.x.....:x.. 211M 145/211 68.7% 211/94230402 0.0% 0/211 0.0% 36082394 NA +8750 chr4 + 190214555 82454712 82454711 82454898 187 TTCCCTCTAGGTTCTTTGCAGATGTAGTTCCAGCAGTCAGGAAGTGGAGAGAGGCCGGAATGAAGGTGTACATCTATTCCTCAGGGAGTGTGGAGGCACAGAAACTGTTATTCGGGCATTCTACGGAGGGAGATATTCTTGAGGTAGGTTACCT---AGTTTACTTTGTTGTTTTGACGCTATCAAAGCA chr4 - 94230402 46369546 46369545 46369735 47860668 47860667 47860857 190 TTTGCTGCAGGATCTTTGAGGACGTGGTTCCAGCCATCCGGAAGTGGAGGGAAGCTGGGATGAAGGTCTACATCTACTCCTCAGGGAGCGTTGAAGCTCAGAAGCTTCTGTTTGGATACTCTACAGAAGGTGATATCTTAGAGGTAGATAACCTTACCATCTTCCTTATGGCTTCTCCACCTACAGAGCA ..:x..x:...x......x:..:..:........x:..x..........:..:..:..:........x........:...........:..x..:..x.....:..x:.:..:..::.:.....:..:..x.....::.x.......:.x....---x:.:.x.:..:.x.:..:xx.:.:xx..:.... 154M3I33M 133/187 71.1% 190/94230402 0.0% 3/187 1.6% 36085166 NA +8117 chr4 + 190214555 82456888 82456887 82457046 159 CCAGTCTTTCCCCTTCTCT-TTGTTCAGCTTGTTGATGGTCACTTTGATACCAAGATTGGACACAAAGTAGAGAGTGAAAGTTACCGAAAGATTGCAGACAGCATTGGGTGCTCAACCAACAACATTTTGTTTCTGACAGATGTTACTCGAGGTGAGTAA chr4 - 94230402 46369854 46369853 46370013 47860390 47860389 47860549 160 CCAGCCTTCGCCTTCCTCTGTCTTTCAGCTCTTCGATGGCCACTTTGACACCAAAATAGGTCCCAAGGTAGAAAGCGAGAGCTACCGAAGGATTGCTGCGAGTATAGGATGTGACACCAACAACATCCTCTTCCTGACTGATGTCCCTCGAGGTAAGTGA ....:...:x..:.:....-.:x.......:x.:.....:........:.....:..x..x.x...:.....:..:..:..:.......:......x.xx..:..x..:..:xxx...........::.x..:.....x.....:x........:...:. 19M1I140M 118/159 74.2% 160/94230402 0.0% 1/159 0.6% 36087034 NA +10119 chr4 + 190214555 82459953 82459952 82460168 216 CACACACACATCCTTTGATTTTTCACAGAGGCCAGTGCTGCTGAGGAAGCAGATGTGCACGTAGCTGTGGTGGTGAGACCAGGCAACGCAGGATTAACAGATGATGAGAAGACTTACTACAGCCTCATCACATCCTTCAGTGAACTATACCTGCCTTCCTCAACCTAGAGAAGG-GTTGTTAAGGCAGACCGCCCTG-TTCCCCAGAGTTGTCCCTGT chr4 - 94230402 46370788 46370787 46371005 47859398 47859397 47859615 218 CACTCTCTCCCTCTCTTATTTGTTTCAGAAGCGAACGCAGCCGAGGAAGCGGACACTCACGTGGCTGTGGTCATCAGACCTGGCAACGCAGGACTGACAGATGATGAGAAATCGTACTACAGCCTCATCTCATCTTTCACTGAACTTTTCCTGCCTTCCTCCACTTAAGGAAAGTGGTGCATGCACAGAAGGCTGTGCTTCACCTGAGTTGTCCTTGT ...x.x.x.x::..:.x....x.:x....:..x.::..x..:........:..:::x.....:........x:.x.....x............:.:..............:x.x...............x....:....x......x.x............x..:..::...:.-.x..:xx:x:....xx..:x..-...x..x.........:... 174M1I22M1I20M 160/216 74.1% 218/94230402 0.0% 2/216 0.9% 36089165 NA +3715 chr4 + 190214555 82464808 82464807 82464879 72 CTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...........:.x...x.xx.x........::..................x.::. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 64267682 NA +3504 chr4 + 190214555 82466160 82466159 82466272 113 TTTAAGCCATTGACATATAATTACTGACAAGCACTTAATTCTGCCATTTTGCTATTTGATTTCTATATATATATATATGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 39136183 39136182 39136291 55094112 55094111 55094220 109 TTAAAAACACTGACATA-AATTGTTTCCA-GCAC--AGTTCTGATATTTTGCTATTTAGGACATAGGCGTATCTTTGTGTTTTTTAATCTGTTTCTTTCTTTCTTTTTTTTTT ..x..:x..:.......-....::.xx..-....--.:.....x:............::xx:x..x:::...x.x.:...x....xx.:.x...:...:...:.......... 17M1D11M1D4M2D77M 77/109 70.6% 109/94230402 0.0% 4/109 3.7% 43329977 NA +3025 chr4 + 190214555 82475315 82475314 82475358 44 AAAATCTATCTACAAAGAAAAGGGAAGGAGAGAGAGAGAGACAG chr4 - 94230402 15943696 15943695 15943739 78286664 78286663 78286707 44 AAGAGCCATCCACAAAGCAAAAGCAAGGAGAGAGAGAGAGACAG ..:.x.:...:......x...:.x.................... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 66531619 NA +16458 chr4 + 190214555 82485333 82485332 82485749 417 TTGTGCTTTTTCATTAAAGAAATAACTCGCCCTGAAAAGCTCATTTGGCAAATGTGGCCATGAATGTGTGTGT---------------------GTGTGTGTGTGTGAAATGAGGTTCTATGTCAAGTCCTGTGAGTGTGTCCTACTGGCCCCTCCCCCACTGTCACACCCACCTCACCAGCAAGGAAAAACTGATGGTTTACACCTGGTCAGTCTGATATTCAGAAGCTTCTGACAGGCTTTCTGAGAAGCTTAGGAAATTCTCCTGGTACTCAGAGCAAACAATCTCATAGCGGTAATGCCGGAACTCCACGGCAAAGGTGCCAAAATAAGACAGGAAGCACATGACCAGGCCCCACTGGACCCTGGCTGCATACATGTGGATGCTTTGGGCCATGAGGATGAAGTCTGGGGAGAAGCAGTCAAGGAAAATACCCT chr4 - 94230402 46374184 46374183 46374578 47855825 47855824 47856219 395 TTTTGTTTGGCCCTTAATGAGGCAA-TCGCCCTCAGAG--CCCTTTGGCAA-TACGACAATGATTGCACGTGGAAAACAAACTCATCAAAAAAAGTGT---------AAATGAGGTC--ATGTCTAACCATAGAAGTGC-----ACCTGCCCCCCTCCCCCTGGC----------------CAAAG-------GACAGGCTACACCTGATCCGTCTGGTACTCGGAGGCTTCTGACAAGCTTTCAGAAAAGCTCAGAAAGTTTTCCTGGTACTCAGAACAAACTATCTCAAATCTGTAGTGCCTGAACTCCACGGCAAACGTGCCAAAGTAGCACAGGAAGCACATCACCAGGCCCCACTGGATCCTGGCAGCATACATGTGGATGCCTTGCGCCATCAGGATGAAATCTGGAAGAGGAAGGTCAAGGAAAACATTCT ..x..:..xx:.x....x..:::..-.......x.:.:--:.x........-.::.:.x....x..:::...x---------------------....---------.........:--.....x.::.x.:x:....:-----..:x.....:.:...x...x.----------------...:.-------..::.x:........:..x.....:..:..:..:..........:......x..:.....:..:..:..:..............:.....x......x.x.x...:....x...............x........:..:x.............x................:......x................:...x.....x........:.....:::::::x:...........:.::.. 25M1D12M2D11M1D21M21I4M9D10M2D20M5D21M16D5M7D245M 287/374 76.7% 395/94230402 0.0% 64/374 17.1% 36111149 NA +10952 chr4 + 190214555 82490052 82490051 82490240 189 AAAGGATACAGAGGACCACACAGAGAGTGATAGATGCCGACAGAATAACCCGTGGAATTCCAACTCTCCGTCCTTCATTCTTGATGTTGACCTTGAGTGTCAGCGCAGCCTGGATCCAGCAGGTCAATGTGCCAAATCCAAAGGTCAAGGAAGTTCCGACGTTATGGATTTCTTCATCATTTGTGAGCT chr4 - 94230402 46375745 46375744 46375933 47854470 47854469 47854658 189 AAAGGATACAAAGCACCACGCAGAGAGTGATGCCGGCCGATAAGGCAACTCGTGGAATCCCAGCTTTCCGTCCCTCATTCTTCAGGTTGATCTTGAGGGTGAGAGCAGACTGAATCCAGCATGCCAAGGTCCCAAAGCCAAAGGTCAGTGATGTGCCCACATTGTGGATCTCCTCATCATTAGAAAGCT ..........:..x.....:...........:xxx.....:.::::...:........:...:..:.......:........x.x.....:......x..x..x....x...:........x.:...x..x.....x..........:x..x..x..x..:..:.....:..:........x.x:.... 189M 147/189 77.8% 189/94230402 0.0% 0/189 0.0% 36114307 NA +3833 chr4 + 190214555 82492204 82492203 82492270 67 CTGCAACCTCAGACTCCTGAGTTCAAGCGATTCTCATGTCTCAGCCTCCCAAGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:x.::..:...:.......:.x...x..x.x........::...........:.:.... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 64295078 NA +8980 chr4 + 190214555 82496063 82496062 82496223 161 AGTACCTGAAAATTACCAAGTAAGGTCATTCCGAAGGAAGCCAGACACAGAGCCACCAATCCACTAATATTCAGCCACGGGTTTAAAACCTTCGGTTTCAGTTGTATGAAGCGCAGAACAGCTACCACAAGGGCT-AGGAATAAAGCAAAGTCTTAAAATGG chr4 - 94230402 46378334 46378333 46378495 47851908 47851907 47852069 162 AGTACCTGGAAGTTGCCGAGTAAGGTCATCCCAAAGGAGGCCAGGCACAACGCCACCAGGCCGCTGACGTTCAGCCAAGGGTTCAGCACCTTTGGCTTCAGCTGAATGAAACGCAGGACAGCAACAACAAGTGCTGAGGAAGAAAGAGAGAGCATGAAGTAG ........:..:..:..:...........:..:.....:.....:....:x.......:x..:..:.::........x.....:.:x.....:..:.....:..x.....:.....:.....x..x.....x...-.....x....x:.::x.x.:..:.:. 135M1I26M 122/161 75.8% 162/94230402 0.0% 1/161 0.6% 36117729 NA +3426 chr4 + 190214555 82498378 82498377 82498438 61 CTCCTGGGTTTAAGCGATTCTCCTGCCTCAGCCTCCTGAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.......:...:.x...x.xx.x........::::..:......:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 64301239 NA +10193 chr4 + 190214555 82502720 82502719 82503129 410 TTCTTACCTAGGAAGGCTGCCATGTTCATAACTTGACTAAACACACAGCTTGCAGGAGGATCATCACCTGCAATGCTTGAAAAAGATGAAATGTTTTATAGTTACT-----ATATCAAAATC-TATAATCCTCCTAACTTTTCCTACGGTCCCACAGGACAG-AAGAGAATTGCTGG--GTTACCTTATATATGGTGCATGCTTCACACCAGGTTTCCTGGATAATAAAAAAAAAAAACACAGAAGCTCAGGTTAAAGCACTGTCATTTGTGCAGTTTAACCTTCCCAGTGGGAAAGTTTTTGCTAAATCTCTTGAT----------GAACAACGAATT---------ACCCACAGA-TAAACTTTACCTTTCAGCTGAATTTAATGGTAAAATTTTGTCATCTTCCACAGCTATGAAGTATCTATCAAAAAAGAATAA chr4 - 94230402 46380115 46380114 46380509 47849894 47849893 47850288 395 TTCCTACCTAGAAACGCTGCCATGTTCATGACTTGGCTAAACACGCAGCTCGCGGGAGGAGCATCACCTGCAATACTTGGAAAACA--AAGCGTACCATTGTAACTCCAAGATGGCAAAGACGTGTGAACAAC--AGCCATTCAT---------CAGAACAGTAAGAGGAAAAATAGCACTCACCTTATATAAGGTGGTCTTTTGGAACCTGGTTTCCT-----ACAAGACACGAGCGCAGAGGAGTTGAGATTCAGGAACT------------------TCTTCCC--------CGTTTTGTTTTTATCACTTCATTATTTTAACCAAACAACTAATTGAAAGCAAAGCCCACAGACCCCATCTTACCTCTCCGGTACATTTAGTGCAATAATTTTGTTGTCTTCCACAGCTATAAAGTACCTGTCAAGAAAAAAAAA ...:.......:..x..............:.....:........:.....:..:......x.............:....:....x.--..::..x::..x..x...-----..:x....:x.-.:.:.x.xx.--.:.:x...x.---------...:....-.....:.xx:x.:.--x.:..........x....xx:x:..x:x...x........-----.:..:.x.x:.:x:..x..:..:.x..:..x.:.x...------------------:......--------x.....xx:.xx...x...x..----------:......x....---------:........-:xx.::......:..x.x.:x.....:..xx.x........::..............:.....:..:....:...:..x.. 86M2D18M5I11M1I10M2D10M9D8M1I14M2I40M5D38M18D7M8D22M10I12M9I9M1I81M 265/366 72.4% 395/94230402 0.0% 73/366 19.9% 36122605 NA +6451 chr4 + 190214555 82504572 82504571 82504662 91 ACTCACACTATCCACAATCCAGCTGAAGTAAACAAAGTAAATACAAGAGGTAGGAACATCCATACGCTGCATTTCTTCCCATCCATGCCTG chr4 - 94230402 46381424 46381423 46381514 47848889 47848888 47848979 91 ACTTACACAATCCATAACCCAGCTGACGTAAATAGGGTAAACACAAGGGGCAAAAACATCCACACGCTGCATTTCTTCCCGTCCATACCTG ...:....x.....:..:........x.....:.::.....:.....:..:.::........:.................:.....:.... 91M 75/91 82.4% 91/94230402 0.0% 0/91 0.0% 36123148 NA +3342 chr4 + 190214555 82507699 82507698 82507745 47 ATATTAAATTAACTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929904 18929903 18929947 75300456 75300455 75300499 44 ATACTGAATT---TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:.:....---.................................. 10M3D34M 42/44 95.5% 44/94230402 0.0% 3/44 6.8% 63577795 NA +3042 chr4 + 190214555 82507711 82507710 82507767 57 CTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTT----TTTTTTTTTTTTTTG chr4 - 94230402 50770971 50770970 50771031 43459372 43459371 43459432 61 CTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATTTG .............xx...x.....x...x.............----.x...::...x.... 42M4I15M 48/57 84.2% 61/94230402 0.0% 4/57 7.0% 31736740 NA +3002 chr4 + 190214555 82507712 82507711 82507756 45 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770968 50770967 50771012 43459391 43459390 43459435 45 TCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT ................xx.:.x.....x...x............. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 31736744 NA +3382 chr4 + 190214555 82540091 82540090 82540174 84 GTCATTCAATGTTTCTACCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAAGGTCTTGCTCTGTT chr4 - 94230402 76182389 76182388 76182471 18047932 18047931 18048014 83 GTCAGTCA-TACCTTAGCATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ....x...-.:::.:x:.x...x........x.:x.:..:xx........x............:...x..:.xx...:...... 8M1D75M 60/83 72.3% 83/94230402 0.0% 1/83 1.2% 6357702 NA +5135 chr4 + 190214555 82561735 82561734 82561942 208 GGGAGGGGGCCGCAGCCGAGCAGGGCCCCGCAG--------CCGGGCGGACCCAGCCGCCCCAGCCGCGCTGCAGCCCCCGCCGTCCCCGG----TCTCCGCCTGCGGGCTGCGCACGGGGCCGGGCCGGACGCCCCCTGGCTGCGCGACGGGCCCAGGCAGGGGAGGGGGCGC----------CGCGCCTA--CCTGCTCTGGTGCGGCGGGGCCGCTGTCGCCTCGAGGG chr4 - 94230402 79799635 79799634 79799860 14430543 14430542 14430768 226 GGACGGGGGGCGCA--CGGTCAGCGCTCT-CAGGGAGAGCTCCCGCCGGACCCCGCAGCCCGAACCCCGC-GCGGCTCCCAAGGACGCGGAGGCCTCCCCGCCCGCGGCCCTCTCACGGAGCCGGGCGGGACTCCCCGAACCCGCGCAGCGGGCAGAGGCAGCGGGCGAGGCGCCAGGGCAGAGCGCACCGAGCACGGCTCCGGGCC--CGGGGCCGCAGCCGCCACACAGG ..:x.....x....--..:x...x..:.:-...--------..x.x.......x..x....x.:..x...-..:..:...:xx.x.x.x.:----..:.....:....x.:x.x.....:.......x....x....xx:x.:....::.....xx......x..:x.:.....----------...:..x.--x.x....:..xx.--.........x.:....x.:x:.. 14M2D13M1D3M8I29M1D20M4I79M10I8M2I13M2D23M 143/202 70.8% 226/94230402 0.0% 30/202 14.9% 2762100 NA +3040 chr4 + 190214555 82562851 82562850 82562934 84 TTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTT-------TGAGACGGAGTCTTGCTCTG chr4 - 94230402 70081426 70081425 70081516 24148887 24148886 24148977 91 TTGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTG ..x.......:........::x..:x:x.xx.xx....:..:...:...:.............:-------.:..:.xx.x.x..:..... 64M7I20M 59/84 70.2% 91/94230402 0.0% 7/84 8.3% 12481425 NA +3160 chr4 + 190214555 82568166 82568165 82568213 48 TGTGTGTGTGTGTGTGTTTGAGAGAGAGAGAGAGAGACTTGCTTTATT chr4 - 94230402 18982315 18982314 18982362 75248041 75248040 75248088 48 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATT .................xx.................:xxx.x...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 63585851 NA +3261 chr4 + 190214555 82568168 82568167 82568220 53 TGTGTGTGTGTGTGTTTGAGAGAGAGAGAGAGAGA----CTTGCTTTATTGAAATAT chr4 - 94230402 81629064 81629063 81629120 12601283 12601282 12601339 57 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATAT ..........:....x...................----:..:.xx....x...... 35M4I18M 46/53 86.8% 57/94230402 0.0% 4/53 7.5% 939104 NA +3124 chr4 + 190214555 82568168 82568167 82568202 35 TGTGTGTGTGTGTGTTTGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982349 75248054 75248053 75248088 35 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA ...............x................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 63585853 NA +3689 chr4 + 190214555 82573756 82573755 82573844 89 CAACAGAGCGAGAAGCTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAATATATATATATATATATATATATATATATATATA chr4 - 94230402 86407048 86407047 86407139 7823264 7823263 7823355 92 CATTAGAATAAGAAGC-ACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA ..x:...:::......-:x:.....:x..............:..x...:..----..:..x.x:.:.x......:.:.........:...:.. 16M1D34M4I38M 65/88 73.9% 92/94230402 0.0% 5/88 5.7% -3833292 -90397110 +3068 chr4 + 190214555 82573810 82573809 82573873 64 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGACAAC chr4 - 94230402 65232556 65232555 65232619 28997784 28997783 28997847 64 ATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGACTAC ..x..........:...:....xx.:xx...:..:...:.:....x.x:...:........x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 17341254 NA +3661 chr4 + 190214555 82596554 82596553 82596653 100 TGGCATGATCTTGGCTCACTGCAACCTCCACCTCCAGGGTTCAAATGAGTCTCCTGCCTCAGCCTTTCAAGTAGCTGGGACTACAGGCACGTGCCACCAT chr4 - 94230402 18197114 18197113 18197205 76033198 76033197 76033289 92 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ......x..x..------..:..:..:xx.x..:.x........:..xx..x.xx.x.....................:......--.::.::....::. 12M6D67M2D13M 68/92 73.9% 92/94230402 0.0% 8/92 8.7% 64399440 NA +3215 chr4 + 190214555 82604727 82604726 82604788 62 ACACATGCATACACATACACACACATACACGTGTACACACACATACACATGTGCACAAACAT chr4 - 94230402 10042366 10042365 10042427 84187976 84187975 84188037 62 ACAGATACATACTCATACTCATGTATACTCGTGAATACATACATCCACAGATACACAGACAT ...x..:.....x.....x..:::....x....x.:...:....x....x:.:....:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 72562361 NA +3119 chr4 + 190214555 82604729 82604728 82604806 78 ACATGCATACACATACACACACATACACGTGTACACACACATACACATGTGCACAAACATACATCTACACACATATAC chr4 - 94230402 89016082 89016081 89016159 5214244 5214243 5214321 78 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACAC .::....:...:x.:..::....:......x.:.:......:.::..x:....:.x..:..x..x.:::::..x.:.. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% -6411353 -87819049 +3646 chr4 + 190214555 82610461 82610460 82610543 83 CTGCAACCTCCGTCTCCAGGGTTCAAGTGATTCTCCTGGCTCAGCCTCCCCAGTAGCTGGGATTACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.x...........x...x.xx..........::.x.........:.:....--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 64413335 NA +3646 chr4 + 190214555 82614440 82614439 82614540 101 TGGCACGATATTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGAGATTCTTATGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCATGCGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:x..:..------..:..:..:xx:x..:.::........x.x...x:.x.x........::::................--.:...:....::.. 12M6D67M2D14M 66/93 71.0% 93/94230402 0.0% 8/93 8.6% 64417326 NA +3507 chr4 + 190214555 82619861 82619860 82619973 113 CAGACAGACAGAGAGAGAAAGAGAGAGAGAGAG-AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG----AGAGAAGAGGAGAGGAGGGGAGAGGAGGGAAGGGGGAAAGGTAGGA chr4 - 94230402 1312656 1312655 1312772 92917631 92917630 92917747 117 CAGCCCGGCAGGGAGGGAAAGTG-GACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAA ...x.x.:...:...:.....x.-..x.....:-...x:....:.x::.xxx..x::...::::...x----..........:....:....:::.:..x..::..::.....:..:. 23M1D9M1I34M4I46M 74/112 66.1% 117/94230402 0.0% 6/112 5.4% 81307205 NA +3156 chr4 + 190214555 82619889 82619888 82619959 71 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGGAGAGGAGGGGAGAGGAGGGAAG chr4 - 94230402 2046811 2046810 2046881 92183522 92183521 92183592 71 GAAGCAGAGCGAGAAGAACGGAGAAAACTTGAGTCAAAGAGAGAGGAGGAAAGGAGGAAAGAAGAGGAAAG ..::x....x....:::.x:....:.:xxx...xx.:.......:.....:......::...:....:... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 80573078 NA +15534 chr4 + 190214555 82629541 82629540 82630644 1104 AATTCATAATCATTTATTGTAAATCACTCACAGTTTACACATTACCAGTGGCAAAATAACACTGTT-AAACACCTACTGGATGAAGAACTTCATTGTGACTATTTCCAATTGCCATCATATCTTTTTCTAAAATTTAAAA-----------------------------------TTTAACT--------------------------TTTAAATCCTACATCTTTTCTGAAAATA-------------------------------------------------------------------------------------------------------------------------------TCTATCTTC-AAAGTGCTCCAATACTAACACTATAAGCCCTTTCTTTTGC----TCTAACATCTAACACAAAGGGCACACTGTCCCATTAATTCCACATGCACTTT-----------------------------------------------------------ACAAAGCAACTTCACACACAAATTTTTTTAATCCAGAAGCTACATAATGATCACTTTATATTTTGCTACAAAATTAATGAAGGCTGCATGCAGGTGAAACATTAGTAGACACGGAATTCTAGATAACTGTTGGTTCTC-AAGATCTGATGGTCTGATGTGGAAAATTAA----TA--TGCTTATTTAGCAGAAGTAGCTAAAGTA--CATGCATCAGTGGCTGGGATCAATTAGAATATAAATTAGGTGCTTAAACATTTAAACGAGAGCTTAATTTGAGCTTAATTTGATGTCTGGCATGTCAGAGTTATACACCTTTA-AGATAACAATA-GCAAACAGAACAAAATCAAACATCTAAACA-GGCATGATTTATAAGGTGGGCTGGCCATAGGGCTCAGGACACAAAACGAGCTGGGCAGTGAACAAATCTCTCTTGAAACAAAGACAGTAGAGCATTAACAAGCTGTAAACACAGCAAAAAAATAAACAAGAGCCATTTC---------------------------CTGTATTCTCATTTTT----TTCAGTTT---TTGATTCTCTTAAGCAAACAATAAAACCACACACACACAATAATTAACAAAACAGAAACATTCTTTAGTTACCACATAGATCCCCCTTCTGTCTTCTACCCTGCCTCTCTGCTCCTTCAGATGGTTGTTTAAAAGCAATGATGGGTTAATTGGTAGAAAAGAAAACAAATGCTCTCCTGAACTACAC--TGAAAGAATATTACTTTCCTTCATCCTGTCAGGGTTAGCATCATGTTCAAGCACATGACAACGTATATTTGACGTATTTTAGCTATAGCGATTAAATCACATGTCCACACTCTAATGTTAAATCGTA chr4 - 94230402 46391020 46391019 46392323 47838080 47838079 47839383 1304 AATTCATAACTGTTTATTGTAAAACACTCAAGAGTTTAACATCATTAATGGCAAATTAACACTGTTAAAACACCTGCTGGATGAAATACAGAATAAAGACAACTC----------TTATATTATATGGCAACATTTGAAAAACGAGAAACAAGGAAAAAAAAAAAAGAATCGAGTTTTAACTGTGGTTTTGTTGGTTCTTTGTTTTTGTTTAAACTCTACATCTTTCTTGAAAATACCTGGGCTGAGTCTCACCTACCTCGAGCCACTGCCGCGCTCCAGGCGTGGGGCCGAGCAGCCTGAATCGAGCACCCCCCTAGCGAGGTGTATGGCGGCGACCTGCTTTATAAATGAGAATCACGCCCTCTATCTTCAAAAGTGCTCCAGTGCCGACAGTATGAAGCCTTTCTCCTGCACTGGCTGACATCTAACACAAAGGGCTGTATGTCCCATTAACTCCGCATGCttttttttttttttttcttcttttttttcttttttcttctttttttttcttttttcctttttAAACAAGGCAAC--------------CGTTTAGTTCAGAAGCTACATAACTGT--CCTTGTATTTTGCTCAGAAACCAATGGATGTTGCATGCAGCTGAAATATTAGTAGAGACTCCGACTTCGATAAAGGTCAGTTTTCAAAGACCCACAAGTCAAAGGCAGAAAATAAAACGTTAGCGGCCTCTTGTGCAAAAGGAGCTAAAATATGCATGCATTCATGGCCATGACTGGTTAGAATATAACTCAGGTCTCCAAACATCGAAACTGAAGCTTCATTTG-GCTTAA----------GACACTGTTGAGCTCTATATCTTTACAAATTACAATGTGTATGCAACAACAAAGGAATCATCTCAACACAGCGTCAGTTC----GTATTTTGGCCTGTATCTTCAACACA-AAAGCCTGCTCAGCAGTCAATGGTTTTCATATTTAGCAAAGACAGCGGCGCGTTGGTTTG--GCTAACAGGGCGAACGAAAAGAAGAAAGCAGATTTTCCAACTAGCAGCTAACTAATTTTAGGCTGATTTCTCCTCTTTGACATCCTGTTTTGCTTGGTGCTCTT--------------CCTGTTCCTTTCCATCGCTT--TGTAGCTGAAACAG-----------CACATTGTGCCCTGTCCTGCCCCGTCCCCTGC-------------AAGAAACACGTCTCAAAAGCATGTTTGATTAA-TAGTAG------AAACAAATTCTCCCCT-AACTGCACTTTGAAAGGATAATTAGTTCCTCCAAACTGCCACGTTTAAC--CATGAACGAGCAAATTACAACGTATTTCAGACATA----ATCTACAGTGACTAAA--ATTAGTTTA-ACTCTAATATTAAATAATA .........:::...........x......x::x..xx....:.::.:.......x..........-........:.........:x..xxx..x:x...x.:.:----------.:....:x.x.xx:..x....:...-----------------------------------.......--------------------------......::..........::........-------------------------------------------------------------------------------------------------------------------------------.........-...........:.:.::...x...:.:x.......::...----x..:..................xxxx...........:...:.....x:...-----------------------------------------------------------....:.....--------------:x....:.:..............:x:.--.:..:.........xx:...::....:.x.:.........x.....:.........x..xxx:x::.x.....xx..::...:..-....:.::xx:...x:.x.::......x..----..--x..:.x..xx...:...x.......:..--.......:x:....::x..::::...........x.:....x:::......:x....x::.....x.....-......----------.:..:xx:x...:.x..:.:.....-.:..x.....:-.:.x:..:x.xx...xx..x.....x....-:..:.x.x..x----..:xx:.....xxx:xx:...:x...-...:.xx...x:.....x..:::x.:..x:x.xx.:.........::.x..:..:::xx.--.:x....x:..:..x:..x.:.x:.:...x:x..:---------------------------...xx.....x.:...----.:.x....---...:.x.....--------------x.:::x.x:x:x..x::x..--::x.:.x......x-----------.....x.xx...:x.:...:.::x.x......-------------x...x:xx:..:.x...:xx...x.x.:....-.:....------........x...:...-....:...--......:...x.xxx.....:..xx...:..x.x...:.--....xx.:....x..x.........x.:x...:..----.x...:..:..:....--.:xx..::.-........:......x:.. 66M1I38M10D25M35I7M26I28M127I9M1I40M4I52M59I10M14D27M2D85M1I30M4I2M2I28M2I71M1D6M10D25M1I11M1I30M1I11M4D26M1D60M2D35M27I16M4I8M3I11M14D20M2D14M11D32M13D32M1D6M6D16M1D8M2I39M2D35M4D16M2D9M1D19M 693/1003 69.1% 1304/94230402 0.0% 402/1003 40.1% 36238521 NA +12790 chr4 + 190214555 82631326 82631325 82631538 213 TTCAAGCACTGCTGTCTCCAGTCCTGGCCTTCCGGGCCTCGATCATCGGCTTGGTTGCCCGTTTGCGGTCAGTGGCCAGCCCCAGCCAGCACATGAAATCAATGAACCAGGTGGTTGGGTTAAAATTTAAGCCAAATTCACTCGCAGAGTAGTCAAAGGGAAAGGTGTGATGGTAATTATGGAAGCCTTCACCTGGAAGACAAAGCGGGCATT chr4 - 94230402 46392507 46392506 46392719 47837684 47837683 47837896 213 TTCAAGCACTGCCATCTCCAGTCCTTTCCTTGCGTGCCTGGATCATCTCCTTGGGAGCCTGTTTCCTCTCAGTGACCAACCCCAACCAAAACATGAAGTCAATGAACCAGGTGGTGGGGTTGAACTTCAGGCCCAGCTCGCTGGCTGAGTAGTCGAAGGGGAAGGTGTGGTGGTAATTGTGGAAACCCTCACCTGGGAAAGAGAGAAGGTGTT ............::...........xx....x..x....x.......xx.....xx...:....x.xx......:...:.....:...:x.......:.................x.....:..x..:.:...x.::..:..x..x........:.....:........:........:.....:..:........:.:.x.:..x:..::.. 213M 167/213 78.4% 213/94230402 0.0% 0/213 0.0% 36238819 NA +17100 chr4 + 190214555 82636559 82636558 82636901 343 TCTCCCCATTGGCCCTCAACACCCCTACTCACCAATGGCACCCAGAGCGACGAGTGGGTTCTGCCGAGGGCTGATGTGCTTGTCATAGGGCCGGTTTCCATACATGTGGGCGGCGCTGTTGACCAGCCAGCTGATGTTGAGTGAGATGGTATAGCGGAGAATAGAGGCCAAGAAGTAGGAATTCCACAGACTCTCTCCCCAGATGTACCAGGGCACCAGCGTGGGGACCACAAAGCACATGAGCACCACGGAGATCTTATAGTACCTACAGGG------CAAGACACCATATCACCATGAGGACCCGCTGATGGGAGAG--AGGATGGGCTGAGCAAGTCACAGGAAAAGT chr4 - 94230402 46393075 46393074 46393411 47836992 47836991 47837328 337 TCTACCCA--GGGCTGCAACACCT------ACCGATGGCTCCCAGAGTGACAAAGGTGTTCTGCCTGGGGTTGATGTTCTTGTCATAAGGGCGGTTGCCATACATGTGAGCGGCGCTGTTGACCAGCCAGGTGACGTTGAGGGAGATGGTGTACCGGAGGATGGAGGCGAGGAAGTAGGCATTCCACAGACTCTCTCCCCAGAGGTACCATGGCACAACGGTGGGGATCACAAAGCACATCAGCACGACTGAACTCTTGTAGTACCTACAGAGAAACAAAAAGACATCATTGCTGTAGTGGGA----ATGATGGCAGGGGAATGAGAGGTTGGGTA--TCACAAGGCAAGT ...x....--..x.:x.......:------...:.....x.......:...:.:x.x........x:...:......x.........:..x.....x...........:.....................x...:......x........:..x.....:..:.....x.:........x.......................x......x.....x.xx.......:............x.....x..x..:x....:............:.------x......:...xx.xx:.xx:...----x......x..:.--.x..x:..:..:.:.--.....:.:x.... 8M2D14M6D243M6I24M4D12M2I15M2D13M 264/329 80.2% 337/94230402 0.0% 22/329 6.7% 36243484 NA +3013 chr4 + 190214555 82649138 82649137 82649215 78 GTGATTTACTTGAAGATTCTCCAGCATAAATAGGGTGAGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 49342275 49342274 49342352 44888051 44888050 44888128 78 GTAATCTGTATGATGATACCACTTCTCAATTGCGGTGAGAGCAATGTTTATATATGTGCGTGTGCATGTGTGTATGTG ..:..:.::x...x...x.:x.xx.x:..x.:x........x::...x.:.:.:....:.....::.......:.... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 33306863 NA +3009 chr4 + 190214555 82670484 82670483 82670533 50 GCTCAAATAAAACCACAAAAGGCAGAAAAAGAATAAAAGACAAAAATAGA chr4 - 94230402 89694276 89694275 89694325 4536078 4536077 4536127 50 GCTTAAGCAAAACCACAAGGACGAGAAAAAAAATAAAAGACAATAACAGA ...:..::..........:::xx.......:............x..:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% -7023792 -87206610 +3194 chr4 + 190214555 82679217 82679216 82679316 100 AAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGG-AAAGAAAGAAAGAAGGAAGGA--AAGAAAGAAAGAAAACATCTTGTTATT chr4 - 94230402 36858288 36858287 36858390 57372013 57372012 57372115 103 AATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTTCTT ..x.x:.....x.:xx..x.....x...::...:.........:.x:.x..x-....::....:..:.:x...:--......::..:..:x..x.x....x.. 52M1I21M2I27M 68/100 68.0% 103/94230402 0.0% 3/100 3.0% 45820929 NA +15458 chr4 + 190214555 82680688 82680687 82680998 311 GTCATGCCCATTCACTTACTTTCTCTGGATCCGGACCACAGGATCAGCAAGCAGGTCAGTGACGTCAAGCTTTCTCCCCTTCTCAATAACATCTCGATGCTTGCGAACAAACAGCCACCCAATATGGGAGAAGAAGAAGCCCCGGCGGGCATTGTGGGGGTCAGCATCCGTCTCTGAGTACTTGTGGTGGGCTCGGTGGTCCCTGGACCACTCGAAGATGTCATTCTGCAGAGAGAATGAG--AGCCTGAGTGAAGAGAGGAACCGCACCGCCGAGCATCCTCCTGGGAAGCTTCCCAGCCTCCCCTCCCCCA chr4 - 94230402 46395735 46395734 46396038 47834365 47834364 47834668 304 GCCACACACCCCCACTTACTTTCTTTGGAATCTGACGACGGGGTCATCCAGCAGATCGGTGAAATCCAGCTTTCTTCCCTTTTCTATGACGTCTTTGTGCTTGCGCACAAACAGCCAGCCAATGTGGGAGAAGAAGAAGCCCCGGCGGGCATTGTGTGGGTCCGCATCTGTCTCCGAGTACTTGTGGTGCACGCGGTGGTCTCGGCTCCACTCGTAGATGTCATTCTGCAGAGAGAGCAGGGTGGGGTGAGAGGAGAAAGGCTGGGTGCTG---------CTCCTGCAGAACCACCCCAGCTCCTTCCCTGCA .:..::.x.x::............:....x:.x...x..:..:...x.x.....:..:....x:..x........:.....:..x..:..:...:x:........x...........x.....:................................x.....x.....:.....:..............x:.x........:.x.xx.......x.....................::::.--:.xx....x.:...:...xxxx.::.:.---------......x::.:.:x...x:x....:::..:x.. 241M2I28M9D33M 227/302 75.2% 304/94230402 0.0% 11/302 3.6% 36284953 NA +3427 chr4 + 190214555 82687160 82687159 82687222 63 GACCTTGTTACAAGAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAG chr4 - 94230402 24168075 24168074 24168137 70062266 70062265 70062328 63 GACTTAGTTACAAGAAATAAGGAAAAAAAAAAAAAAAAGTGAGAGAAGCAGGAAGCAGGGAAG ...:.x...........x..::........:...:....x:...:...x.:...:x.::.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 58519085 NA +3054 chr4 + 190214555 82691005 82691004 82691046 42 TGTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGAGA chr4 - 94230402 9440360 9440359 9440401 84790002 84790001 84790043 42 TGTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTCTGGATGAGA ................................x.xxx..... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 73250645 NA +3747 chr4 + 190214555 82699460 82699459 82699533 74 CTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCATGTCTCAGCCTCCCAAGCAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::........:.x...x..x.x........::....:......:......x.::... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 64502334 NA +3682 chr4 + 190214555 82699688 82699687 82699810 123 AGTCTCCCACTGTCACCAGGCTGAAGTGCAGT-----GGCACAATCTCAGCTTA----------CTGCAACCTCCACGTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197064 18197063 18197199 76033204 76033203 76033339 136 AGCTCTCTGCAGTCACCATGCTGG-GAGCAGGCTTAGGGCACA-CATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::::.::.x.......x....:-.x....x-----......-:x..x....:----------..:..:..:xx.xx.:.::........:.x...x.xx.x........::...........:......x...... 24M1D7M5I6M1D10M10I74M 86/121 71.1% 136/94230402 0.0% 17/121 14.0% 64502624 NA +9336 chr4 + 190214555 82705274 82705273 82705421 148 CATCCTCACCTGGAAAGCCATGGAGTTGGCGACAGCCAGAAATATCCTCAGAGGCAGCTTGGCCCGGTAGGACCTGTGGCTCCACAAGCGATGGGCACCAGCTGTCACACCCAGAGCGGCCAGGAGGAAGCAGAAGTAGGCTGCAAGA chr4 - 94230402 46399482 46399481 46399629 47830774 47830773 47830921 148 CAATCCCACCTGGAAGGCCATGGAGTTAGCTACAGCCAGGAAGATTCGCAGAGGCAGCTTGGCTTTGTACGAACGGTGGCTCCACAAGCGATGCGCACCAGCCGTCACGCCCAAGGCTGTCATCAGGAAACAGAAATACGCTGAAAGA ..x:.:.........:...........:..x........:..x..:.x...............::x...x..x.x..................x........:.....:....::..x.:..xx.....:.....:..x....x.... 148M 119/148 80.4% 148/94230402 0.0% 0/148 0.0% 36305792 NA +3438 chr4 + 190214555 82710799 82710798 82710902 104 AGAGGGAGAGAGGG-AGGGAGGGAGGGAGAGAGAGAGAAGGAGAGAGGGAGAGAGAAAATGAGAGAGAGAGAAAACAAG------ACAAAGAGAAAACGAGACAGAGAGAG chr4 - 94230402 40465790 40465789 40465900 53764503 53764502 53764613 111 AGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGAG ...:x....:.:..-..:..:.x.:..:..:.x:.:x:x....:......:....:...x.....:.::.:..:xx...------..x..:xx.....:.x...:.:.... 14M1I64M6I26M 69/104 66.3% 111/94230402 0.0% 7/104 6.7% 42245009 NA +3043 chr4 + 190214555 82712265 82712264 82712326 62 TATATATATATATATATATATATATATATATATTTTATTTTTATTTTATTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::....x.....:...:..:.:.............x.:.x.x....x..:.x...:::... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% -10023083 -84207319 +3068 chr4 + 190214555 82712267 82712266 82712322 56 TATATATATATATATATATATATATATATATTTTATTTTTATTTTATTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x..x...:......x....:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -10023081 -84207321 +3548 chr4 + 190214555 82719877 82719876 82719950 74 CTGCAACTTCAGCCTCCTGGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.::x.:x..:.......:...:.x...x..x.x........::::.......:.:.:....x.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 64522751 NA +3290 chr4 + 190214555 82727783 82727782 82727856 74 CTGCAACCTCCTCCTCTTGGATTCAAGCGATTCTCATGCCTCAGCCTACCGAGTAGCTGGGATTACAGGTACGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xxxx..::...:......:.x...x..x.x........x:.:.........:.:....x..:.:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 64530657 NA +3822 chr4 + 190214555 82764802 82764801 82764880 79 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:...........:.x...x.xx.x........::.............:....--.:..::.... 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 64567676 NA +3377 chr4 + 190214555 82771041 82771040 82771124 84 CTGCAGCCTCAACCTGCCTGAGCTCAGGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGCGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCT-TCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCACTGTG ..:.....:x..x..-:...:.:...:...x.:.x.xx:x........::::................x..--.......::.. 15M1D55M2D11M 59/81 72.8% 81/94230402 0.0% 3/81 3.7% 64573915 NA +3001 chr4 + 190214555 82774661 82774660 82774727 67 TTCCCTCTTCCCCCACCCTTTGCTCCTCCCAGCATGTAAGAGGAATTTACTGCCTGAAGAAAACTGT chr4 - 94230402 67825459 67825458 67825525 26404878 26404877 26404944 67 TTCCCCCCCCCCCCCCCCTTTTTTTTTCTTTGTCTGCAAAAGGAATCTGATCCTTGAAAAAACCTGT .....:.::.....x......x:.::..::x.:x..:..:......:.:x.x.:....:...x.... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 14949202 NA +4068 chr4 + 190214555 82798336 82798335 82798460 125 GGATGAGCACCAGGGAGTACACGGCCCCCAAGTGGAGCAAGCTCATCAGGACGACATTCCTCCAGACGATGTTCTG-CCGCTGCCCGCGCGCGCCTGGCCTCTCCGGGCCGCCGCCGCCCTCAGAG chr4 - 94230402 46409017 46409016 46409123 47821280 47821279 47821386 107 GGCTGAGCGC------GTACACGGCGCCCAGGTGCAGCAGCCCCATCTGCACCACGTTGCGCCAGACGATGGCCTGTCCGCCGCCCGC-------------CGCCATCTCGCCGCCGCTCTGAGGG ..x.....:.------.........x....:...x....:x.:....x.x..x..:..x.x..........x:...-....:......-------------.x..:xx:.........:..x..:. 10M6D60M1I11M13D25M 81/106 76.4% 107/94230402 0.0% 20/106 18.9% 36389319 NA +3181 chr4 + 190214555 82814671 82814670 82814718 48 GGGGGGAATCTGTATGTTTGTGTGTGTGTATATATATACATATGCATA chr4 - 94230402 89821274 89821273 89821321 4409082 4409081 4409129 48 GGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ....::...x...:...:.x..................:.....:.:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% -7006603 -87223799 +3661 chr4 + 190214555 82814935 82814934 82815016 82 TGCAGCCTCAACCTCCTGAGCTCAAGTGATCCTCCCACCTCAGCCTCTTGAGTAGCTGGAACTATAGGCATGTGCCACCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:.....:x..x..:...:.:.......x.:.x.xx:x........:.::..............:.--.:..::....::.. 66M2D14M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 64617808 NA +14944 chr4 + 190214555 82818613 82818612 82819256 644 AACTAAATTTTAAGCAGCTGTTTCAAA--AAAGACTATACACACATAAAATAGGATTACACACTTTAATCTGATTGACACTGAGGAAGTAGGGAGGACATGAAAGAAATTTAGTTTTAGCTCTGCTTTATGCATAACC-AGATGCTCCTTTTCTAAAAAGTATATTGAGGTTTTAAAAAACAC-ATTTATCAGAATAC------TTCAGGAAACCATACTATGTGTAATC-----CAGGAAATACACTATTTGCAGAATAGGAAAATCATCACTGGCAACAAAA--GATTAAAACAAAAATAAA-GCACCAGGGTTCTGAG-CAGTTCTAAGGTGAGTATATCAGCAGAAATAGTGTAAATGCTCTTGACTGGTTGCTATGCAAACATGCTAATGAGGACTA------GTCCATGTCTTATA-ATTTTTTTTTTTAACATGTTTCTTTGGAAAAATGGCAATATTGAG---TGGAAGAGAAGCTGTCCTTTTAGACACCCAGCTTATTGGCCTGGGTGAGAACAACTTTGAGAACTGGCATGAAAGCAGAGGTCTCACTGAAGTTGCTGGTGCTAACTATGTGGGTATGCATGGTCAATCCTTCTGAGTAGTTTCGAGTTTCAATGCTCCTTGCAATGTTGTGTAAACCACTGGTGATTGTTGGTGAAAGCTG chr4 - 94230402 46411933 46411932 46412568 47817835 47817834 47818470 636 AACAGAATTGCAAGCAGTCTCGTAAAATGAAAGACCAACTACACTTATAACAGGATCAGACTCTTTAATCTGGTGT---CTAAGGAA-------------------CAGTGAGTTGCAG---GGTCTGATACACAACCTACCTTCTCGCTTTC--ACACGTATCT---GTTATTAAAAGCCACTGTTTAACAGTATAACATGCATCTAAAAATTGACAGTATGGGGCGCCGTCCCCATTAAATAGACTATCTGTAGAC-----AAACCATTGGGGATGAGAAAACTGTTAAAAAGAAAAAGAAAAGCACCAGGGCTCCAAGGCCCGCCTAGAATGATGGATTTCGCAGGGGGAGCGTAATGCCATTTGTCAGAGCTCTACTGCGACATGCCG-TGAGGACTGCGTTTGGTCCGCTTCTTGCATGTTTGCTGTAGAAATGCACTTCTTTGGAAAAGCAACCATCACAGGCTTTGCAAGCGCAG-GGTTACTTCAGACACCCAACTTATTGGCCTGGATGAGGACAACTTTCAGAACAGGCATGAAAGCAGAGGTCTCGCTGAAGTTGCTCTTGCTGACTATGTGCATGTGGATGTTCAGTCCTTCCACGTAGTTGCGGGTTTCGATGCTCTTCACGATGTTGTGCAAGCCGCTAACGATGGCCGGAGAGAGCTG ...x:....x:......::x:x.x...--......:.xx:....x..x..:.....:.x..x..........:.xx---..:.....-------------------x.x.x....x:..---x.::.x..:..:....-.xx.x...x:....--.x.x....x.---.x.x......:x...-:....x...x...x------.::.::..x:x.:.x....x.xx::.-----..xx.....x.....:..:...x-----...:...::xx.:::.x....--.x.x....x.....x...-.........:..::..-.xxx:...:::...xx:xx.:x....:::x..:....xxx.x:...x.x.:x:x...:xxx:......::-........:------....::x....::.-:...x:.x.xxx..:::::............::::.x..xx:::.---..x...x.x..-x..:x:..:.........:.............:....:........x.....x....................:...........xx....:........x:.:..x...x...:......::x......x..:.....:......:.::.:........:..:..:..:::...x.::..x..:..... 27M2I47M3D8M19D13M3D16M1I14M2D10M3D15M1I14M6I26M5I23M5D21M2I18M1I16M1I70M1D9M6I14M1I45M3I11M1D190M 411/607 67.7% 636/94230402 0.0% 66/607 10.9% 36406680 NA +7147 chr4 + 190214555 82821026 82821025 82821124 99 CCAAAACTTACTGTCTGTTCCCTAAGTTTATCATACAGAAACTCCAAACGTTTGCTGGCATCATCTAGCTTCCTCTTGGTTTGCTGCAGGAAAGAAAAA chr4 - 94230402 46412914 46412913 46413010 47817393 47817392 47817489 97 CCAACACTTACTGTCTGTTCCCTAAGCTTGTCATATAGAAATTCCAGGCGTTTATTTGCATCATCTAGTTTCCTCTTGGTTTGCTGCA--AAAGAAAAA ....x.....................:..:.....:.....:....::.....::.x...........:...................--......... 88M2D9M 86/97 88.7% 97/94230402 0.0% 2/97 2.1% 36408112 NA +7035 chr4 + 190214555 82824545 82824544 82824686 142 AAATACATACAGGGTCTGTTGCTGAAGAAAGGCAGCGCTGAATAAGATCCTCAAATGTGGTCTTTAGAATGAGGTGCTCATCTGGAATAGGTTTCTTGGTAATTTTTTTTGTTGGCAAAGACTGCACATGCTGGAAGAAACA chr4 - 94230402 46415354 46415353 46415493 47814910 47814909 47815049 140 AAAGACCTACCGGATCAGAGGCAGACAGCAGGCACCTCTGGATAAGGGCTTCAAATGTTGTCTTCAGAATAAGGTGCTCCTCAGGGATAGGCTTCTTGGTTATCTTCTCTGTTGGCAGTGCCTGAACATGCT--AAGAAACA ...x..x...x..:..x.xx..x..x::x.....x.x...:.....:x.:........x.....:.....:........x..x..:.....:........x..:..:.:........:x.x...x.......--........ 132M2D8M 107/140 76.4% 140/94230402 0.0% 2/140 1.4% 36409191 NA +7814 chr4 + 190214555 82827364 82827363 82827643 280 GTTACCTGGAAGGTATTTCCAATAGGAGCCCCTGGGGCACCTTCAATATTGGGCTTTGAAAAAGATGGTGGCATGCCTGTTTGACCAAGAGGTTGCTGTAC-----GCCATGGAAGGGCTGGCCACCTGGAAGATGTGGCTG-TGGGAATGAAGACTGG-----CTTGACAGTGGTACTGGAGCTGAAGGCTGTTGCTGCAGCATTTGTGACTGGGGGTCACCCAACGGGTTCATGATTGGTGATGTGATGGGAACAGGAGGCATGAAGTTTTCAGGCATCTGTTAAAAGA chr4 - 94230402 46415632 46415631 46415908 47814495 47814494 47814771 277 GTTACCTGGATAGCATTGCCAATTGGGGCCCCGGGAGCCCCCTCTGTCCTGGGTTTGAAGGTAGTGGGAGGCACGACACACGGCCCCAGAGCCTGGGGTGCATAGGGGCCCAGTGGCGCCTGCTGCCCCGCGGAGA--GCTGCTGAGGCTGAAAGCTGGGTGTGCCCACCGGTGCTGCTGGAG------------GCTGCTGCATCTGTGCCTGCGGATCCGCCAGTGGGTTCATGATGGGGGAGGTGATGGGAACCGGGGGCATGAAGTTATCAGGGACCTGGGGAAAAA ..........x:.:...x.....x..:.....x..:..x..:..x:.x:....:..x:.::x..xx..x....:.x.xxx:x.x..x....x:..xx..:.-----.x.x::.x:.x..:x..::..:x.x:..x:--....-..:.:x....::....-----.:::x.:...x.:......------------.....x....:....x...x..:..xx...::...........x..x..x...........x..:...........x.....x.:...xx:...:. 101M5I30M2D4M1I16M5I19M12D96M 179/266 67.3% 277/94230402 0.0% 25/266 9.4% 36411732 NA +5177 chr4 + 190214555 82828973 82828972 82829081 109 CATTGGATGGACATCTTTTTCTAGTACCTTCTTCTTTTTGGGTACTCTGTTCAAAGCTGGAGGGTCATTCCAACCATTCTGAGGACCTATAACAG-----ATAACAGAGAATGT chr4 - 94230402 46417690 46417689 46417803 47812600 47812599 47812713 114 CATTTGAGGCAGGACTTCCTAGAATACCTTTTTCTTCTTGGCAGCTCTGTTCAGGGCAGGAGGGTCATTCCAGCCGTTCTGAGGTCCTGGGACAGAAAGAAGAACAGAGACTGT ....x..x.x.x:x...::.xx.:......:.....:....xx:.........::..x..............:..:........x...:x:....-----.x........x... 95M5I14M 82/109 75.2% 114/94230402 0.0% 5/109 4.6% 36411283 NA +3342 chr4 + 190214555 82834921 82834920 82835003 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGAATTACAGGTGCTCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:...........::x...x.xx.x..:.....::::...........:....x...--.:....::.. 71M2D10M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 64637795 NA +17182 chr4 + 190214555 82842123 82842122 82842527 405 CCCTTTCAAGCGCAGACCTGTTCTTTGGGACGCAGGCAGCTCACTGGCAGCAGGCAGTGTACCTGTTGTTCCAGGAGGCAGTGCATAAGCTGAAGATGATGGTGGAGCTCCTGGTCCGCCATGCTGGAAGGATGCTCCAGAGGAAGGGGGAGGAGGGAAAGAAGTAGCAGGGCTGGAGGTAGGTGAAGAGGCCTGGTGCTGTGCTGCGTACAGCTGAGACTGCCCAGTATAGGAAGAAGCAGAAGATATGTAAGG--GGTGTTA------------GGGTAAGCGTTTGAAGTAGGAGGAGCAACAGGCTGCTGAGGTCGATACATTGCTGACCCCCCTGTTCCGAAGGGATACGGCTGGGCTGGTTGATAAGCTACACCAAGGAGAAGAAACAGAAATTTCAATTAGTTACAAGTTTA chr4 - 94230402 46421897 46421896 46422298 47808105 47808104 47808506 402 CCCATCCAAGCGCAGACCTGTTCTCTGGGATGCAGGAAGGTCACTGGCTGCAGGCAGAGTACCTGTTGGTCCAGTAGGTAACGCATAAGCCACAGAAGTTGCTGGAAGTCCTGGCCTGCCATGCTGAAAGGATGCACCA---GAAGGAGGAAGGGGGAAGGAAGAGGCAGGGTTCAGGCTCGTTGGGGAGGGCTGAGGCTGCCCAGGGTACAGCGGGGAGGGCACAGGTTGGGCAGCGG--GCAGGTAGGGAGGGTTGGTGTTAGAGGCAGGGCTCGGGTAAGAGGCTGAAGCAGGGGCAGCAACAGGCTGCTGGGGCTGATACAGAGCTGTTTCCCCCGTTCCAAAAGAGTACTGCTG---TGTCTGATACGCTATA------AACAGAAAGAAGAGATTCAGTCAGT---AAGTTCA ...x.:..................:.....:.....x..x........x........x..........x.....x...:.::........::x...x.x..x....:x......:.:.........:........x...---.....:...:.:.....:....x:......:.x::.x.x.x..::....x...:x....:x.x.x.......x.:..xx..x...xx.:..x..x:.--.x..:..x.x.:..--.......------------.......x.x:.....:...:.x...............:..::......xx....x::....:.....:..:.::...x....---..x:.....x....:.------.:x.....x.::.:x....:.:...---.....:. 139M3D97M2D14M2I7M12I83M3D16M6D25M3D7M 291/388 75.0% 402/94230402 0.0% 31/388 8.0% 36420226 NA +4017 chr4 + 190214555 82844378 82844377 82844551 174 CTACTTACGCTGTGGCTGTG--GATAAGGTGG-TACCTGGGTGTGCATA---TGACCTGGAGATGTGGGAAGCTGACCAGCAGCATTTGGATTAACATTTCCATGCATTATGAAACCCGGAGGTGGAGGATTTTCTCCCTAAGAAACAAGAACATGGTAAGAAG-GCGGATACAAGTAGAA chr4 - 94230402 46422819 46422818 46422999 47807404 47807403 47807584 181 CTACTCACTCTGTGGGTATGCTGGCCGGGTGCCTGCTTGCGAGTACATGCTGTAGCTTGGAGACGTGGCTTGCTGTGGTGGTGCGCTGGGGTTAATGGCACCTGGCATGATAAAGCCTGGAGGAGGTGGCTTGTCTCCCTGTGAAAAGAGATAGCAGGAAAAAGAGTGGAGGGAAGTAGGA .....:..x......x.:..--.::x:....x-.:.:..x.x..:...:---.::.:......:....xxx....xxxx.xx..::.x..:....::x:x..xx....x..:..:..:.....x..x..x..x.......:x....x:...xx:::.x..:...-.:...x:x......:. 20M2I10M1I16M3I112M1I16M 111/174 63.8% 181/94230402 0.0% 7/174 4.0% 36421559 NA +13632 chr4 + 190214555 82845161 82845160 82845389 229 GAGCAGAATTCTGCTCAAAGAGGAATAATGAAGGATATACCTGTGTGTCAGAGGGAGAGGCTGCAGGTGGATGGCTGGGAAGGGCAGTAGGAGTTTTGTTACTCCAGGTAGTGACAGTAGGGGCAATTCTAACCTGAATTGAACAAAGAAATACCAATCACAGAAAATAAAAAATGAAAACGTTAAAAGAAGAAAAAAACCCCAAAAGGTATTA-ATAGCCAGATGCAAA chr4 - 94230402 46423405 46423404 46423617 47806786 47806785 47806998 213 GAGCAGGG----GCTCGGAGAG-AATAACGAAGGTTATACCTGTGTGTCAGAGGGACAGCCTGCAGGAGGATGGCTGGGAAGGGCAGTGGGAGTTTTGTTACTCCAGGTAGTGACAGTAGGGGCAATTCTAACCTGAATTGAACAAAGAAATACCAATCATGGAAAACAAAGCAATAAAA------------AAAAAAAGTCTAAAGGATTTCACACAACGAGATGCAAA ......::----....::....-.....:.....x.....................x..x.......x....................:.......................................................................::.....:...:x.xx....------------.......x:.:...:.:.x.:.-.:.:.x......... 8M4D10M1D157M12D22M1I15M 185/212 87.3% 213/94230402 0.0% 18/212 8.5% 36421756 NA +3084 chr4 + 190214555 82845434 82845433 82845489 56 TGCTTTCAAGGTAGCTGGAATTCCCAAAAAAACAAAACAAAACAACAACAACAAAA chr4 - 94230402 10256767 10256766 10256822 83973581 83973580 83973636 56 TGTTGCTACAGTTGTTAAAATTCACAAAAAAACAAAACAAAACAAAAACAAAAAAA ..:.x::.x:..x.:.::.....x.....................x.....x.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 72588667 NA +11376 chr4 + 190214555 82851362 82851361 82851665 304 TCTAATGCTAAGTGTTATCTACTGGACTCAC---CTTACTCAAA-------CATTACAAAAATGG--------------TCAATTCTAATTACCTGGTTGGTGTTGTCAGGAAGAAAAGCCAAGGCTGCAGCAATACTGCCCTGAGCTGCCAACAAATTGGCATACTGACTCATCTTCGCAGCCAAGAGAACTCCTACAGTACTAGTGTCCATGGCTTGAGTGAGTTGCACAGCTTTTCGCAGGATGACAACTTTCTCAATCAGATCCTAAATGAAAAAAATGAGTAACAAACAGAAATATCAAGACCATGTATGAGAGGAAGCAGGA chr4 - 94230402 46426050 46426049 46426364 47804039 47804038 47804353 315 TCCAATGCTAACTGC-----ACTACACTCACATCCTTGCTTAAAGTGGGCCTATTAACAGAGAGGAAGAGTACCAAGCCTGAAGGCCACGTACCTGGTCAGTATTTGCAGGCAGGAAGGTCAGAGCCGCAGCAATACTGCCCTGAGCAGCCAGGAGGTTGGCATATTGACTCATCTTCTCAGCCAAAAGGGCCCCCACAGCATTAGGGTCCACGGCCTGGGTGAGCTGTACGGCCTTGCGTAGGATCACCACCTTCTCTATTAAATCCTAGAAGAACGGGTCAAAGAAAACAGGGAAATGAGAAGAGCA--------GGGGGGCAGGA ..:........x..:-----...:x......---...:..:...-------:....xx.:.:x..--------------.x..xx.:.xx........::..:..xx....x..:..:.:..::..:....................x....:x.::........:............x.......:..::.:..:....:.:...x.....:...:..:.....:..:..:..:..x..:.....x..x..:.....x..:.:......:.x...x:::x::.:x..x.x.x:.....:xx....x..--------:..::...... 15M5D11M3I10M7I14M14I230M8D11M 208/291 71.5% 315/94230402 0.0% 37/291 12.7% 36425312 NA +9134 chr4 + 190214555 82854898 82854897 82855065 168 CTTACCACAAAGGGCTGAAAATTCATCCGGCTTTGCATAAGTCAATACTGCAGCTAAAGCCTCTCTCCAATTTTTAAGATCACAAGACTCAACAATCTCTTTCCAGTTCTTCATCACCACTGCAGTGATGAGCTTGAGAAACGAAAACAAAGGAAGAATTAAAAGTCT chr4 - 94230402 46428644 46428643 46428809 47801594 47801593 47801759 166 CTTACCGCAAAGGGCTGCAAACTCATCTGGCCTGGCGTAAGTGAGCACAGCAGCCAAAGCCTCTCTCCAATTCTGCAGATCACAAGACAGCACAATCTCCTTCCAGTTCTTTGTTACGACTGCAGTGATGAGCTGGAG--CCGAAGAAGAGACCACAGTTAAGATTTT ......:..........x...:.....:...:.x..:.....x.::..x.....:.................:.xx............xxx........:...........::.:..x................x...--x....:.x:.::xx.x.:....:.x.:. 138M2D28M 129/166 77.7% 166/94230402 0.0% 2/166 1.2% 36426254 NA +11634 chr4 + 190214555 82856921 82856920 82857151 231 TACGTTATTGCTTATTTTTAAAATAA---CATACCCTGGTAATTTTGCTTTGGGATTTTGCGAAGTATTTTTTCTGGGTTCGAGCCAAGAGTTCTTGTCCACCTGCTATGGCCAATATAATGGCATCGGCCATGCGGTTATCATGTAAACAAAGGTCAACAGCACTCTCAAAATTGCCCGTCAGCAAAGCCTGAGTAATTAAACCATCAATGTCTGCAACAAGAAAATAATACA chr4 - 94230402 46430050 46430049 46430280 47800123 47800122 47800353 231 TACGTGAACGTTGGTTCTTAGCAGAAATACATACCCTGGTAATTTTGCTCTGTATCTTAGAAAAGTACTTTTCCTGTGTCCTAGAAAGCAGCTCTTGTCCACCTGCGATGGCTAAGATAATGGCGTCAGCCATGCGATTATCGTGCAAGCAGAGATCTACTGCACTCTCGAAGTTCCCAGTCAGCAAAGCTTGGGTAATCAAACCGTCCACATCTG---CAAGAGAGCAGTGCA .....x.x:.:.x:..:...:x.x..---....................:..x:x:..x.x:.....:....:...x..:.x..xx.:x..:..............x.....:..x........:..:........:.....:..:..:..:..:..x..x........:..:..x..x...........:..:.....:.....:..x.::....---.....:.::.:.:.. 26M3I187M3D15M 171/228 75.0% 231/94230402 0.0% 6/228 2.6% 36426871 NA +4060 chr4 + 190214555 82861614 82861613 82861723 110 GAAAAAAAAATAAGTACCTCTCCCAAGAGCTGCTCTTCAGCAGCAGGGCTCTCCTCCCCATCACTCTGTGCTACTTGGTCAGAGTCTTTAAGAGCCTTTGGTACACAAAA chr4 - 94230402 46431576 46431575 46431685 47798718 47798717 47798827 110 GAGAGGATAATAGGTACCTCTCCCAAGAAATGCTCCTCTGCAGTCTGGCCTTCATCCCCTTTGTTCAGTAAAGGCACATCAGATTCTGTGGGAGCCTTCAGCAAAGAGAA ..:.::.x....:...............:x.....:..x....:xx...::..x.....x.:::..x..:xx:x:xx:.....x...x.::.......::.:.x.x.:.. 110M 71/110 64.5% 110/94230402 0.0% 0/110 0.0% 36430038 NA +5712 chr4 + 190214555 82863304 82863303 82863407 104 TCCCAA--AAGTTTACCTTCTTTCCTAGATCTTCTTTTCTGTATCCTAGAAGTTCAAGGTATTTTCCACGAGAATCATCCTCAAAGTTTACCTTTAAAAAAAAAGA chr4 - 94230402 46434046 46434045 46434151 47796252 47796251 47796357 106 TCCCAAGCACACTTACCTTATTCTTCAGATCATCTTTCCTGTATCCCAACAGCTCAAGATATTTAGCACGTGAATCTTCTTCAAAGTTCACCTTCAAAAAAAAAAA ......--.x::.......x..::::.....x.....:........:.:x..:.....:.....xx....x.....x..:........:.....:.........:. 6M2I98M 81/104 77.9% 106/94230402 0.0% 2/104 1.9% 36429258 NA +13228 chr4 + 190214555 82864358 82864357 82864610 253 TTACCTTCAAAAAGGACCACACATTTTTCTCAAATTCAGTCTGAGAAGCATCAATTTTTTTTTGGCAATAATTGATAAATCCTTGTGACTGCACAGCCTGCTGAAGTTGGTCTGATCGGCTGAGGAACTCCTTTTCTGTTACAACCTGACTAATGAACACATGGTGCTGCTGCTGCTGCTGCTCAGCTCCC---TGATGAGAAGGCATTCTGACATTCTCAAACGTAACCAGTTTGCCTCCAAACTATAAAAGAGA chr4 - 94230402 46434535 46434534 46434787 47795616 47795615 47795868 253 TTACCTTTAAGAAGGACCACACATTTCTCTCAAAGTCAGCCTGGGCCATGTCAACTTTCTTCTGGCAGTAGCTGACAAAGCCTTCGGACTGCACAGCCTCCTGCAGCTGGGTTGAGCGTGCCAGGAACTCCTTCTCTGTAACAACCTGACTCACGTAGACGTAGTGATGCTGTGGCTGCTGATCAATGCCCGGCTGCTGTTGAGGC---TTGGCATTCTCAAACGTAACCAGCTTGCCTCCAAACTGGAATGAAGA .......:..:...............:.......x....:...:.xx:::....:...:..:.....:..::...:...x....xx.............x...x..:...x:...x..xx:x...........:.....x...........x.:.x.x..:.:...x.....:x.......x...::x...---..x..xx:....---:..:...................:.............:x..x::... 191M3I12M3D47M 192/250 76.8% 253/94230402 0.0% 6/250 2.4% 36429823 NA +3026 chr4 + 190214555 82866094 82866093 82866146 53 AAGAAAAAGAAGGGAGGGAGGGAGGGAAAGAGAGACAGAGGGAGGGAAAGAGA chr4 - 94230402 40771086 40771085 40771138 53459265 53459264 53459317 53 AAGAAAAAAAAAGGGGGGAGGGAGAGGCAGAAAGGAGGGCAAAGGGAAAGAGA ........:..:..:.........:.:x...:..:x:.:x::........... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 42095008 NA +18636 chr4 + 190214555 82866800 82866799 82867331 532 CCACCTACTGAAAAAGAAGCACCAACAGGCCTTCGAATCCACTTGGGCGGCTTCTTCAGAGGCAGCACTATACTATGCTGAGCAGTCTGCTGTGGAATTTGTAACGGAGGAAGGGGCTGTCCTGTGCCAAAGGGATCAAGATTCCCAAAAGATGATGAAAGCT---------AAAAAAGATAATAATAACATAAGCA----------TCCGACCATACACAAAGTTTCATTTTTTTCCAGTCATATCCAAAAAAATTTTTGATC--ACAATTGTCCAATTAACCAGCATTGTTAATCAGTGAAGTCATTTCAAAATATTACACAACACATACTTTTTTCAGGCATTATAATAGAAAACTTTAACACTTCCTATTACCTTGTCAACTTGTTTCTGTCTTAAACCATCTGTGCTACCTCCCATGATAGAATAAACACTGATACGCCCATCAAACGAAGCAGCTGATAAGACAGCAGGATTTCGGGGACACCACTGAATATCGAAGCACCACTGTGTGTTGGTGGGAAGTTCATATAACACCTAGGCCAACAAAAA chr4 - 94230402 46436549 46436548 46437074 47793329 47793328 47793854 526 CTACTCACTGAGAACGATGCTCCCACAGGTCGCCGGATCCATTTGGGGGGCTTCTTTAGGGGTAGAACGACACTCTGTGGTGCAGTCTGCTGGGGAAGCTGCAGGGGTGGGAGAGGCTGTCCTGTACCAAACGGATCAAGGTTTCCAAATGAGGATGAAAGCTTTGAAAATAAAAGGGGGTGAAGAAAACAAGAGTGAGACATCATCTCCAATAAACCGAACTATTTCTTTCTTTCACAGC-----------AAATTAGTACTCCTGCAAGCATACAGTTGG--AACATCCTCCA------AAGGCTACCCACAAACCCATGC--TTCATCCTCTTTCTAACCACTTTCTTAG-----CTGCATGTTTCTCAATACCTGGTCAACGTGCTTCTGCCTCAACCCATCCGTGCTGCCTCCCATGATAGAGTAAATGCTGAGCCGTCCATCAAATGAAGCTGCAGAGAGGATGGCAGGATTTCTGGGACACCACTGGATATCAAAGCACCACTGCATGTTCGTGGGCAACTCATACAGCACCTGGG-CAGCAAAAA .:..::.....:..x..x..x..x.....:.x:..:.....:.....x........:..:..:..x..x.:...x..:x.x...........x....x:..:.:x..x..:..:...........:.....x........:..:.....x..x..........---------...:::.:.:.x:.x....x:..::----------...:.:x.xx.:x.xx:....x..:...:x...:-----------.....xx.:x..--:...x::.x..:..::--.:...:x.:x.------...x.xx::..x..xx::.::.--:x...x..:...::.:x..:.x.xx...-----:.xx.:::...::.x.....x......x..:.....:..:..x.....:.....:..............:....::....xx..:........:.....x..x..x.:..::..........x............:.....:...........::....x.....x.::.....:.:.....:..-..:...... 163M9I25M10I34M11D12M2I16M2D11M6D22M2D28M5D185M1D9M 355/505 70.3% 526/94230402 0.0% 48/505 9.5% 36430251 NA +6636 chr4 + 190214555 82870322 82870321 82870428 107 TACCTCTCCTGTGTTTGGATTGGAGCAGAGAATCTTAGCATCTTTTCCACAGCTCAGTAACAATTCAGGATCTGCCATGCTCCAAGCAATTGCCAAAATCCCCCTAT chr4 - 94230402 46437905 46437904 46438011 47792392 47792391 47792498 107 TACCTCGCCTGTGTTAGGGTTTGAACACAGTATTTTAGCATCCTTCCCACAGCTGAGTAGCAGCTCTGAATCTGCCATACTCCAAGCAATGGCCAATATGCCCCTGT ......x........x..:..x..:..x..x..:........:..:........x....:..::..x.:.........:...........x.....x..x.....:. 107M 86/107 80.4% 107/94230402 0.0% 0/107 0.0% 36432417 NA +9999 chr4 + 190214555 82871926 82871925 82872092 167 GTAACAGCAGCACGATACCTGGCATGGTTTTCCAGGACACGAAGTGGAGAGGAAGCAAATCGAAGATCCCACATCTGGATCACTGGTAACCGGTCATCCTCGGAGGCAAGGACCATCTGAGTAGCAACATCAGGATGCCATGCCAACCCAGAACAATGCATCTGAAG chr4 - 94230402 46438700 46438699 46438866 47791537 47791536 47791703 167 GTTGCAGGAGTCTTGTACCTTGTATGGCTTTCCAAAACACGCAGTGGTGAGGAGGTAAATCTAAGGTCCCACATCTGAATCACAGGTAACCTGTCGTCCTCCGAAGCCAAAACCATCTGGGTAGCAACATCGGGGTGCCAGGCCAGGCCCGAACAGTGCATCTGAGG ..x:...x..:x:x:.....x.:....:......::.....x.....x.....:.:.....x...:...........:.....x.......x...:.....x..:..x.::........:...........:..:.....x....:x..x.....:.........:. 167M 130/167 77.8% 167/94230402 0.0% 0/167 0.0% 36433226 NA +9614 chr4 + 190214555 82874605 82874604 82874753 149 ACTTACTCTGTTACTATGGTCACTGACTTTGATGATTGGCTCATTTTTTCTAAGATCCCATACAGTGGCCCGGCCACTGGGACTGGCTGATGCTAAAATATGCTGAACTTGTCTGTTCCATGCAATGCAGCTGATATCTTCTGGCGGCT chr4 - 94230402 46439628 46439627 46439776 47790627 47790626 47790775 149 ACTCACCCGGTTGTTGTGGTCGCTGACTTTGATGATGGGTTCATTCTTCCTGAGATCCCACACAGTAGCTCGTCCGCTGGGGCTGGCGGAGGCCAGGATGTGCTGGACCTGCCTGTTCCATGCAATGCAGCTGATGTCCTCAAGAGGCT ...:..:.x...::.:.....:..............x..:.....:..:..:........:.....:..:..x..:.....:.....x..x..:.::..:.....:..:..:.......................:..:..x:.x.... 149M 117/149 78.5% 149/94230402 0.0% 0/149 0.0% 36434977 NA +7894 chr4 + 190214555 82875722 82875721 82875830 109 AATACCTGTGTTTTGGCTCCTGGTGTCATTGGGGTTGCAAAATTATTTAGATCCCATATGTAGATTTCAGATTCATTAGCACCAGAAGCTACCAGATTAGTCTGCAAGA chr4 - 94230402 46440300 46440299 46440408 47789995 47789994 47790103 109 AGTACCTGTGTCTTTGCTCCCGGAGTCATCGGTGTGGCAAAATTATTCAAGTCCCAGATATAGATTTCAGACTCATTAGCACCAGAGGCCACCAGATTAGTCTGCAAGA .:.........:..x.....:..x.....:..x..x...........:.::.....x..:...........:..............:..:................... 109M 93/109 85.3% 109/94230402 0.0% 0/109 0.0% 36435422 NA +11321 chr4 + 190214555 82878728 82878727 82878940 213 ACCTGGAAAATGTTCACATCCAAGGCTCTCACTGGGCCAGTATGCTTGTCATTCTGGGCAATCACAACTTCCTTGTCTCCAGCTATAATTTTAGAAGGATCATAGAGAATAATATTTCCATTTTCACCACCTGCAATCAGAACTCCAGAGACATCTCCTTTGGAATCCATTTTATAAGGCCCCCAAATCAACTTGTGGTACCTACAGGAGAAA chr4 - 94230402 46441652 46441651 46441864 47788539 47788538 47788751 213 ACCTGAAACATGTTGACATCAAGAGCTCTCACTGGTCCCGTGTGCTTGTCTTTCTGAGCAATTATTACTTCGGTGTCTCCAGCTATGATTTTGGCTGGGTCATACAGAAGGACATTCCCATTCTCGCCCCCGGCGATCAGGACTCCGGAGACTCTCTCACCTGCAGTCATGCTGTGAGGCCCCCAGATCAGCTTGTGGTACCTGCACGACAGA .....:..x.....x.....x.::...........x..x..:........x.....:.....:.:x.....xx.............:.....:.xx..:.....x....x:.:...:.....:..:..x..x..:.....:.....:.....x::::.x::x.x.x:...x:.:.:.........:....:............:..x..x.:. 213M 158/213 74.2% 213/94230402 0.0% 0/213 0.0% 36437076 NA +5964 chr4 + 190214555 82881851 82881850 82881949 99 AACTTACCTGTTGCTAGGTAAATGGGGTGATTCTGGGCAGGGCTCCATGCCTGCATGGCTGTACGATCTACTTCCTTTAACTTCATCCTGCTAAAGGGA chr4 - 94230402 46444541 46444540 46444639 47785764 47785763 47785862 99 AACTCACCAGTGGCCAGGTAAATGGGGTGCTGCTGGGCAGGACTCCACGCCTGCATGGCAGTGCGGTCAATCTCTTTCAGCTTCATTTTGCTGCAAAGA ....:...x..x..:..............x.x.........:.....:...........x..:..:..x.::..:..:.:......::....:x.::.. 99M 76/99 76.8% 99/94230402 0.0% 0/99 0.0% 36437310 NA +3035 chr4 + 190214555 82888052 82888051 82888085 34 AACAAACAAACAAACAAACAACAACAAAAAAAAC chr4 - 94230402 6701294 6701293 6701327 87529076 87529075 87529109 34 AACAAACAAATAAACAAACAACAACAAAAAAAAC ..........:....................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 76186758 NA +3075 chr4 + 190214555 82888352 82888351 82888408 57 AAAAAAAAAAAAAAAAAAAAAACACACAAAAAACATATATATATATACACACAGACA chr4 - 94230402 54347385 54347384 54347441 39882962 39882961 39883018 57 AAAGGACAAAAAAAAACAAAATGTCACAAAAAACATTCATAAAAACACACACAGACA ...::.x.........x....xxx............x:...x.x.:........... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 28540967 NA +6252 chr4 + 190214555 82900803 82900802 82900928 126 ATGACCCGAAGTTGCTCCGCAGTGGGCTGCAGCACCCGTGACACCGTGCTCAGCCGGGAGCGCGGCCTCTCCTTCCACCAGTGCGTATGGGAGCAGCCTCGAAGCCTTCGA-ACTCCCTGCGGGGCC chr4 - 94230402 46446301 46446300 46446427 47783976 47783975 47784102 127 ATGACGCGGAGCTGCTCGGCGCTGGGCTGCAGCGCTCGCGACAACGGGCGGAGCCGGGAGCGCGGCATCTCCTTCCACCAGTGAGTGCGGGCGGCGGGTCGCAGCCCCCGGCGCTTCCCGCCCAGCC .....x..:..:.....x..:x...........:.:..:....x..x..xx...............x................x..::...x.xx.xx...x....::..:-:..:..:..xx:... 111M1I15M 94/126 74.6% 127/94230402 0.0% 1/126 0.8% 36454502 NA +37070 chr4 + 190214555 82916929 82916928 82918758 1830 TTTTATGTATTCTAGGTGGTTATCCAA--ATGCCAACCCAGTCCAGGTTTCAACAGCAACATTTTTTCTTTTCTTCAACGAAGAGTAGAGAATGGAGATCAGCTCTATCAATACTGTTCATTGTTAATAAAAAGTATGCCTCTCAAGCAACAGCTTCAGTGGGATCCTAGCAGTCACAG--TTTGCAGGGGTTTATGGACTTTGGTCTTGGAAAACTTGATGCTGATGAAACGCCACTTGCTTCAGAAACTGTTTTGTTAATGGCAGTGGGTATTTTTGGCCATTGGAGAACACCTCTTGGTTATTTTTTTGTAAACAGAGCATCTGGATATTTGCAGGCTCAGCTGCTTCGTCTGACTATTGGTAAACTGAGTGACATAGGAATCACAGTTCTGGCTGTTACATCTGATGCCACAGCACATAGTGTTCAGATGGCAAAAGCATTGGGGATACATATTGATGGAGACGACATGAAATGTACATTTCAGCATCCTTCATCTTCTAGTCAACAGATTGCATACTTCTTTGACTCTTGCCACTTGCTAAGATTAATAAGAAATGCATTTCAGAATTTTCAAAGCATTCAGTTTATTAATGGTATAGCACATTGGCAGCACCTCGTGGAGTTAGTAGCACTGGAGGAACAGGAATTATCAAATATGGAAAGAATACCAAGTACACTTGCAAATTTGAAAAATCATGTACTGAAAGTGAATAGTGCCACCCAACTCTTTAGTGAGAGTGTAGCCAGTGCATTAGAATATTTGTTATCCTTAGACCTGCCACCTTTTCAAAACTGTATTGGTACCATCCATTTTTTACGTTTAATTAACAATCTGTTTGACATCTTTAATAGTAGGAACTGTTATGGAAAGGGACTTAAAGGGCCTCTGTTGCCTGAAACTTACAGTAAAATAAACCACGTGTTAATTGAAGCCAAGACTATTTTTGTTACATTATCTGACACTAGCAATAATCAAATAATTAAAGGTAAGCAAAAACTAGGATTCCTGGGATTTTTGCTCAATGCTGAGAGCTTAAAATGGCTCTACCAAAATTATGTTTTCCCAAAGGTCATGCCTTTTCCTTATCTTCTGACTTACAAATTCAGTCATGATCATCTGGAATTATTTCTAAAGATGCTTAGGCA-------GGTATTAGTAACAAGTTCTAGCCCTACCTGCATGGCATTCCAGAAAGCTTACTATAATTTGGAGACCAGATACAAATTTCAAGATGAAGTTTTTCTAAGCAAAG------TAAGCATCTTTGACATTTCAATTGCTCGAAGGAAAGACTTGGCGCTTTGGACAGTTCAACGTCAGTATGGTGTCAGCGTTACAAAGACTGTCTTTCACGAAGAGGGTATTTGTCAAGACTGGTCTC----------ATTGTTCACTAAGTGAGGCATTACTAGACCTGTCAGATCATAGGCGAAATCTCATCTGTTATGCTGGTTATGTTGCAAACAAGTTATCAGCTCTTTTAACTTGTGAGGACTGCATCACTGCACTGTATGCATCGGATCTCAAAGCCTCTAAAATTGGGTCACTATTATTTGTTAAAAAGAAGAATGGTTTGCATTTTCCTTCAGAAAGTCTGTGTCGGGTCATAAATATTTGTGAGCGAGTTGTAAG-------AACCCATTCAAGAATGGCAATTTTTGAACTAGTTTCTAAACAAAGGGAATTGTATCTTCAACAGAAAATATTATGTGAGCTTTCTGGGCATATTAATCTTTTTGTAGATGTGAATAAGCATCTCTTTGATGGAGAAGTGTGTGCCATCAATCACTTTGTCAAGTTGCTAAAGGATATAATAATCTGTTTCTTAAATATCAGAGCTAA chr4 - 94230402 46448061 46448060 46449896 47780507 47780506 47782342 1836 TCTTTTTTTTTCCAGCTGGCTGTCTAACGATGCCG--CTGCTCCAGGCTTCAGCAATGATATGTTCCTCCAGCTTCAAGAAAAGGTGGAGAGAGGGGAACAGGCCTACTGCTACTGTGCCCTGATGGTACAGGAAATGTCCCTGCAGAAGTGCCAGGAGTGGGACC--GGCAGTCCCAGCGTCTGACCGGCTTTATTGACTTGGGAGCAGGCAGCCTCAATGCTGACGAAGCTCCGCTGGCCTCAGAAGTGGTAGTTGTCATGGCAGCCGGTATCTCAAGCCCTTGGAGGGCTCCCCTCGGCTACTTCTTTGTGAGCGGCGTGACTGGTTGCCTGCTGGCTCAGCTGCTTCGTCAGGCCATCAGTAAGCTGAACAACATTGGTGTCACGGTGCTGGCCGTGACATCGGGTGCCACCGCGTGCGGGGCCGAGACCGCAAGAGCTCTGGGGGTCAGGATCAACCCCCAAAGGATCCGCTGCGCTTTCCATCACCCGCCCAGCTCCGCTCACTGCATCGCATACTTCTTTGATGTTTGCCACGCTCTTCACTTGATTAGGAACACGCTGCAGTACTTCCAGAAGATACAGTGGCTCAGTGACACTGTGCAGTGGCAGCATGTGGTGGAGCTGGCAACTTTACAGGAGGAAAAGCTGT------TGGGGCCCAGATCGGGCCATCCAGTGAGTAAAGAGACTTACCAGCTAAAGGTCAACCTCGCTGCCCCATTGTTCAGTGAGGGTGTTGCTGATGCACTGGAGCACCTCCAGAAGCTGGGCCTGGCCTCATTCCAGAACTGCGGTGGTACTGTCAAGTTCCTGCGTACAATGAGCCGTCTGTGCGATGTATTTCATGGCAGAGGCTCCTATGGCAGCGGCCTGAAGGGACCTTTGCTAGCTGGAAATTACAACAAAGTCAGCCCCCTCTTCCACGAGGCCAAGAGCTTCTTTGTTACCTTAACAGACTCTACAGGGAGACACATTATTAAGAGCAAACGCAGACTGGGCTTTCTGAGTTTTTTGCTCAATGCTGAGAGCCTCAAATGGCTTTACAGCAACCCTGTGCTTCAAGAGGGTGCTGCTTCCCCCCGCCTCCTGACCTCCGCCTTCAGCCTCAGCCCGCTGGAGCGGTTTCTCGGGACCCTCAGGCAAACCTGCAGTGCTGGCAGTGGG----AACCCCACCTGTGCCACGTTTCAGGCTGCCTACCGCAAAGTGCTGGCTGGCTGCAGCCTGGCGCCAGACGCTCTGCACAGCACAGCAAGTATAAGCAGCTTGGACCTGTCTCTGTCTCACGGGACAGACCTCACCCTTGGCAGTATTCGTTCTCAGTATAGC-CCAGCTCGTGGGAGGATG-CTGGCA-GCAGGGCTCCCTTGT----GCTGGCCTTCTTTTGCGTGACTCTCCTCTGAGCAATGCACTTACAGACCTATCGCTGCACAAGCAGAGCATCACTTTTGCCGCAGGCTTAGTTGCTGAGCAATTAGCCTCCAACTTGCAATGTGAGGCTTGTGTTGCATCCCTCTTTGAGTCAGATAGGAGTAGGCTGAGGTGCGGAGCAGTGCTCTACATCAAGAAGTTACACGGACTAAGCCTGCCCTCAGCAAGCGTGCACCATGTAGCACACATTTCTGAACAAGTCCTGAGCAGGCACAGACAATTAGGAGATGACCA--CAAGAAC-----TCCAAGCTACAGTATTTGTCTCTAGAACAGAAAATTTTCCATGAGCTTCTGGGACAAAATCACCTCTTCCCCACCCTCTCTGAGCATTTATTGGAGGGGGAATTGCACATTGACAATCACTACACAATTTTAGTGAAGGGAATAGCAGAGTGTTACTTAAACATCAGAACAAA .:..x.x.x...:..x...:.:..:..--.....:--.::x......:....:..:::.:..x..:::::xx......x:..::..:....:x..:..x...x:...:::x......x.x:..x.::..x.:::x...:.:..xx..x.:::x.xxx.......:.--:......x...--.:..xxx..x.....x.....x..xx:x..x.:x..::.......:...:.x..:..x..:......::x..xx.xx.x.......:x.....:.:x:...x......::.x..:..:..:..:..:.....:.:.:.x.::x....x.:::...x.................x.:.:..::....:....:::....x..x:....:..x.....:..x.....x.:......x..:::::.x.::x...:x....:...x:.....:.xx:x..::.:xxxx.x::x..xx:x..::.x..:..x..:..x:.xxx:..::x...x::x..:..............:x:.......x:x..xx:x..:..x..:..::.::.x...x.:..:..:.:x..x....xxx.:.:..::.:x.::..x........:x.x......:.:.:.:.x:.:x....:x.::.::.:.------...::xxx.x.:.::.:xxx.:x.::.:.xx::.:.x.:.:xx:..:..:..x..:xx:..::...x.:.x..:......:....x..:::....:.:..::.::.x:x:xxx:.:.:....x.x:.x..:..:.....::x......::..x.x..::.:...x:...x.:.x:.....x:..::.x...x..:.:..:::..x:.....x.:x..x..x..:..:...:..:.:x...:..x.....::...:.x.:..x.x.x..xxx:..:.......x:x.:........x...x.x...x...xx::x.:x..x..x.....::.:..:.:x.:...:..x..:...:.x.....................:.x........:...x:x..::x...x:.:.x.:...x:::xx...::..::::..:.....:.x.:xx.....:.x::::.xx.....::x:.....x::..:x..:.....-------:..::.:.:.::::.----.:...:.....:::x:.:..:...:xx..:...:::..xx..xx.:.::.x.:..:x:.xxx:xxx..x.:.:.x.xx....x..------......x...x...x.x..xx.xx...:x:...x....:.x:.x...x.x.xx:...:x:x.......:.:-:....x:xxx::..:x..-..xx..-.x..:.xx:x:....----:....:..:----------.:.x.:.x..:..::.x...:.xx:......:..:xxx..:.:..::.::x...::.x.xx:..x..:.xx.....x:.xx.:...x.xx.:xx:..:xxx.......x:..::.::.xx.x..x.x..x:..:...xxx.:x:xx::x.::xx:..:x..x.::.x.x::.:..:...xx:x.:..x:.:x:::.x..:....x...:x..:::.:x..x::.x.:....x...:.:...:x.:..-------.:x.x...x::::...:.x.--:xx....-----..:..:.x.x:.x.x....x...xx..........x..x::.......::x..:..x.x.x.:..:..:x:x:x:x.xxx.:.....:.x..x..x..:...x..:::::::x........x:::x.xx..:x.:....:x...::.:xx....x......:......:.x.. 27M2I6M2D129M2D11M2I473M6D490M7I15M4D85M6I71M1D18M1D6M1D15M4D9M10I247M7I20M2D7M5D173M 1039/1802 57.7% 1836/94230402 0.0% 62/1802 3.4% 36468868 NA +4174 chr4 + 190214555 82920836 82920835 82920918 83 CCACAACCTGCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCACGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..::x.x..:...........:.x...x.xx.x........:..:.........:......--.::.......::.. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 64723710 NA +27972 chr4 + 190214555 82925718 82925717 82926360 643 TTTACAGAATAGTATAAATGTTTATTTTCTGTATGATTTACTTTGCTGTCCTGTTTTTACAATATAGAAAAGTGTATTCTTTGAATAGCTCTAGTAAATATAAATTTAATCTTTCTACTTTGGGATGTAAATAGAGCTAAAAAATTATATACCCAACCCTCCCCAAATAGTCTTTTAAAATCATTGAATTAATGTGGCTATTCATCTTGTTCAGCAATTTGATGCAAATGCCT----GAATACAAAAAGTTATTTAGTAAGTACTACAC-----AGGAAGGAAAA-----GGCTTAATATTTTAGATAGATAGATTTTTGAAAATCAGAAAAACTAGTAGCATTTGATTGCACCTTGAAATTTTTTTACAAGCAAAACATTCGTAAGCAATGCCATCATACATAATCTACAATTGTAATCAAAATTTCACGAACATTTTCTGCACACTGTATATAAATACACATCAC-AAAGGTGCAATTAGAATTA--ACACAGAGTATGTACAAAATGAACAAAGTTTAAGTTTAGACCAAAAA---CTTATTGCAATCT-TTTGAAAAATAACTTGA----TTATTATTTTACCCTCTTACACTAATTTACATTTATACAAATTTTAATTAAACATACTAGATTGAGGTGCTAA---------GAATGTTTGAACTATCTACAT chr4 - 94230402 46451932 46451931 46452596 47777807 47777806 47778471 665 TTTACAGAATAGTATAAATGTTTATTTTCTTTGTGATTTATCTGACTTT--TATTTTTACAATATAGAAAAGTGTATTCTTTGAATAGGTCTAGTAAATATAAATTTAGTTTTTCTACTTTCAGATGTAAACAGAACTACAAAATGA-ACCTTTGTCCCATTCCCAATCG--TTTTCACACAACTGCATGAGCTTGACTGTCAATCTTGTCCAGCAGTTTGATGCAAATGTTTAAGGAAGTACAAAAC-CCAATCCGTACATATTACACCAGGGAGAAGGGAAGAATCCCAGCTTAATACTGGAGAAAGCTTGCTCAAAACAAAATTGAAAAACTAAGAGCTTTTGATTGCACCTTCAAA-GTCTTTAGAAGCAAAATATTCTCAAGCAATGCCATCATACATAAT-TACAACTGTAATCTAAATTTCACAAG---TTTCTGCACACTGTATATAAATACACATCACAAAAGGTGCAATTTAGAGAAAGACACATAATATATACAAATTAACATGGATTGAAGTCTAAACAAAAGAAGGCATATTGCAATCTGTTTGAAAAATAATGTAAGTAGTTATTACTTTATTCACTTACACTAATTTACATTTATACAAATCTT-ACTGGACATACAACATTAGGTCACTAGAAGTAAACTGAATAACTGCACTACCTATgt ..............................x.:.......::.x:..x.--.:...................................x...................:.:..........x:........:...:...x.....x.-.:x::::x...x::..x...x.--....x.x.:x.:..x..x.::x..:..:.:x.......:.....:.............::.----:.:.......x-::.x.:x...x:..:.....-----..:.:....:.-----:........:.xx...x..x.x.x.:xxx:x...x:x.........:x...x..............x...-x.:....x........:....x:......................-.....:.......x.........:.:---...............................-............x::.xx.--.....x.:...:......x.:.xxx:::..x....:..:..x...:.---.x...........-............:x.:.----......:....::.x...........................:..-.:.::......x.x...::.x::...:---------....:x:..x....:...::. 49M2D96M1D22M2D61M4I11M1D20M5I11M5I70M1D45M1D26M3D31M1I19M2I47M3I13M1I17M4I45M1D27M9I21M 491/631 77.8% 665/94230402 0.0% 46/631 7.3% 36473786 NA +21195 chr4 + 190214555 82927757 82927756 82928312 556 ACAAAGTCATACAACACCATACATTATAAATTATATG-------AATTTATAAAC---------------ATTTTTTGTCAAAGGTATCAGAAAGAGAACATCTAAT---------TCTTAAGAAACCCAAGCAAATTAAAAAATCTATATAATAAAGAAAAA-TTCAATTTAGAAG-------GGGCATAAGCAGATTTAACTAAGATTTAAAATGTACTAATTTCCTCATTTAAAATTTCTTCTCCTTCAGTATTATAATTTCAGGTCTTTTAAAACAAGGACTGAATTAAAATACAGTAATTGTTTTTCTTCCAGAAAATCAAGTGTCCCTGCACCTTAAATTTTCTGTACAGTTCCATTTATCA-GTCTTTTGTGCAAGAGTTAGCAATTCATGGCACAAGGGTCACTTTTTGCCTTTCCTGCAGAGTTGATGACACTCATCAAACATCGTCCGAATTCCTCAAGTATCATCCGTTCCGCTGCTGCCTTTGATTTTCCCTTCTTGTCTGCCTGCTCTGCCTGGGCAAGGAGGCAATTACATGTGGCTTCAGCTACTTCCTTAGTTACAAATGTAAATGGCAATCTGAAATGA chr4 - 94230402 46454721 46454720 46455301 47775102 47775101 47775682 581 ACAAAGCAACGCAACTCTATGTACTGtaaataatatattataataatttatatatGCCCTTCAGGCAGTTATTTTTGGGGAAAGG------GAAGAAAACACCTACTCTTTTTTTCTTTTAAGAAACCCAAG----TTAAAAGCTGTACATCAGGAAGAAAAAATGTCTTTTAGGAGTCATTTTATGTAGAAGAGAATTCAGCTAAGACTTAAAAGGCTCTAAAT-CTTGTTATAAAATATTTTCTTGTTTAATCTTCTG----CAAGTCAATTAAAACAAGCACCAAATTGACAAGTGTTACTAAATCCTCTATTCCAAATCAAAGTGTCCCTGTGCCTTAAGTGTTCTGTTCAGTTTGCTTCATTGTGGCTCATGTGCACGCGTCAGCAGTTCATGGCACAAGGGTCACTTTTGGACTTCCCTGCAGAGTTAATAACTCTCATCAAACAGCGTCCAAACTCCTCCAGGATCATGCGCTCCGCAGCTGCTTTTGACTTGCCCATCTTCTCAGCTTGCTCTGCCTGTGCCAGAAGGCATTCACAGGTTGCATCGGCTACCTCCTTGGTTACAAATGTGAAGGGCAGCCTGAAACAA ......:x.::....x.:..::.:.:.....x....:-------........x.:---------------......x.xx.....------:....:....:...x.---------.:..............----......:x.x..:..x.x:........-.x:xx.....:..-------:x.:.x...x::...:.:......:......x.:x....x.-.:.xx.x......x.:....:x..:.:.x..x.:----..:...xx..........x..::....:.x.x:::x..x.x:x.::...x::xx...x:x...........::......:.x......x.....:xx..:..::-.x..:x......x.x..:....:.......................x.x...:...........:..:..x...........x.....:..:.....x..x.....x..:.....x.....:.....:..x...x....x..x..:...........x..x..:.....x.:...x..x..x..:.....:.....:...........:..x....::......::. 37M7I11M15I15M6D16M9I16M4D27M1I13M7I41M1D34M4D104M1I227M 397/541 73.4% 581/94230402 0.0% 55/541 10.2% 36473036 NA +14225 chr4 + 190214555 82930932 82930931 82931168 237 TACTGACTTACTTTCCGCCTCCACTATTTAAAGCTGGTGTTGGCCTAGTAAGCAAGTCTGAAATTTGAGAGGATAACTTCGTCTTGGCTGCTGTTTGTTGCTGTACCCTTACTTCAGCTGCATCTGCCAAATGCATCAATGTCTTCCTTTCCGGGCTTTCTTCAAAATTCTTACAGCCAATACATTTGCATATTGAGGAACACATTATTTTTGCCTAAAAGATTTACATAAGAAAAG chr4 - 94230402 46455688 46455687 46455921 47774482 47774481 47774715 234 TGTTAACTTACTTCCCTCCACCGCTGCTGAGTGCTGGTGTTGGCCTTGTTAGGAGATCTGAGATCTGGGAAGATAACTTTGTCTTTGCAGCGGTCTGCTGCTGGACCCTAACTTCTGCAGCATCTGCTAAGTGCATCAATGTCTTTCGCTCTGGGCTTTCTTCAAAATTTTTACAGCCAACACATTTGCATATGGAAGAACACATGATTTTTGCCTGAAAGAAACA---AAGAAAAG .::.:........:..x..x..:..::.x.:x..............x..x..x.::.....:..:..:..:........:.....x..x..x..:..:.....x.....x.....x..x........:..:..............:.x:..:.................:..........:............x..:........x..........:.....xx:.---........ 226M3D8M 188/234 80.3% 234/94230402 0.0% 3/234 1.3% 36475244 NA +17204 chr4 + 190214555 82935972 82935971 82936439 468 GCATCTCACCTCATAGCATTCACAGTAGTTTTTAAGACATCCTGATCGTTTGCAATTACACCCTTTGCTATGACGTCGATCAGATTCTCCCTCCTTTCCTTTCCCTATCTTAGGCTTAAAGGCTTCTGGATTTCTGTCAAGGCATGCCTAGCAAAACAGATC--AAATATCAGT------------------------TAGAGTTAAAT------------------CACAG--TAGATGAAAT-------TTAAACAC---------TGCAAAAGGAATTGATAACGTTTCT------------------------------TTGCAAG----------ACAAT-----------------TGAGTTTTATAAAACTGATGAAACTGGATATTTCTGTCAGT-------TAAATGAAATAAAAAATAATCACCTTTATTGCTTTTTGCCTTTCATTTTCATGTTCCAAATTGTTGTAACAATTAGTACAATTGCAGTTGTTGCAAAATTCACCATTTGCAAAGCAATCACAATACCTGAAAGGTAAAAGTCAGTATAAGGTAAAAAGTCATTATTAAGGAAAACTAATTATCT chr4 - 94230402 46456605 46456604 46457185 47773218 47773217 47773798 581 GCTTCTTACCTCATAACACTCACAGTAGTTTTTGAGACATCCCGAGCGTTTACAGTTACACCCTTTGCTGTGTCGCCGATCTGATTCTCCTTCCTTTCCTTTCCCTATTTTGGGCTTGAAGGCTTCAGGGTTTCTGTCAAGGCAAGCCTGTCAATGCAGACCCAAAGGGTCAGTCTCTGCATATGGGGAGCAGAAATCCAAGGTGCAATGCAACAGCTTACACCTTGCACAGGTGGGAGGAGATTAGGGTATTAAACACCCATCTGATTTCAGAAGGCACAAGCTACATCTTTCATCCCAGCTATCTTTGGAGGCAAGCTATATTGCCAGTTTTCCCATCACAATTCCACTCAGAAACAAGCTAAATTCTAT-ATACGAATGGAACATGCTCTTCACTTCAACAGCCTTGAAAGTAGAAAAAAGACTTCTCACCTTTATTGCTTTTTGTCTATCATTTTCATGGTCCAGGTTGTTATAACAGTTTGTACAGTTGCAGTTATTGCAGAATTCACCATTTGCAAAGCAATCACAGTACCTGAAATGGAAGACACAG-----------AAAGCATTAGCAAGCACAACC-ATTACCT ..x...:........:..:..............:........:..x.....:..:..............:..x..:.....x........:.................:..:.....:........x..:..............x....:x...x:....:.--..:x:.....------------------------:.::..xx...------------------.....--x:..x..:..-------........---------.x..:....x.:x:::x..:.:.:.------------------------------....x..----------.....-----------------.:.:..:...-.x..x:...:...xx.x.x..:x:x...::-------x..:.::..x...:.x.xx...................:..x...........x....::.....:.....:..x.....:........:.....:..........................:.........x.x..:.xx...-----------..:x.....x:...x.x...:-....:.. 162M2I10M24I11M18I5M2I10M7I8M9I25M30I7M10I5M17I10M1D30M7I144M11D21M1D7M 354/455 77.8% 581/94230402 0.0% 139/455 30.5% 36479367 NA +5694 chr4 + 190214555 82937221 82937220 82937329 109 ACTTACAATTTCAAACACAGTGATTTTGTACAATTACAGGGCTTTCGGGGCCGACTGGCCGACTCTGATGGGATTATGCTGTACAGATAGAAAAAAAGATATACATTTA chr4 - 94230402 46459107 46459106 46459213 47771190 47771189 47771296 107 ACTTACAATTTCAAACATAAAGACTTTGTACAATTGCAAGGCTTCCGGGGGCGATTTGCAGATTCAGAAGGAATTATTC--TATAGGGGAAAAAAAAGGCATCTATTTA .................:.:x..:...........:..:.....:.....x...:.x..x..:..x..x..:.....x.--..:..:x::........::..x:..... 79M2D28M 82/107 76.6% 107/94230402 0.0% 2/107 1.9% 36478114 NA +7393 chr4 + 190214555 82938393 82938392 82938507 115 CCTATTTTCAAAATAC--TCACCCATTGAATGGAAGCCGTGCCTGGGTCTGGATACCAGATGTTCCAGTAAAGGTAGAGTTGCTTGCTATTGATACATATGAAGACTGCTGTAGCTA chr4 - 94230402 46460381 46460380 46460497 47769906 47769905 47770022 117 CCTCTTTGTAAAACACACTCACCCATTGAATGGTAGCCTTGCTTGGGACTGGATACTGGATGTCCCAGTGAAGCCAGTGTTGCTTGCTATAGATACATATGATGATTGCTGTAGCTA ...x...x:....:..--...............x....x...:....x........::.....:.....:...x:..x............x...........x..:........... 16M2I99M 97/115 84.3% 117/94230402 0.0% 2/115 1.7% 36478012 NA +16999 chr4 + 190214555 82939534 82939533 82939981 448 CATACCTGAGTAACATACTGAGCTGGAAGCACTGCATAACCCACATTCCCTGTTCCCGGAGCTGGTGCCAGGACAGTGCCTGGTGGCAGGTTAGTGAGGTTGGGCTGGATCTGTGGCAGTGGTGTGGCAGGCATGATAAGCCGTTGCTGTGGCTGGCTAGTAGTTACTATTTGTGAAGTTGGATTGATTGGTTTTGGAACAACCTAAAAAGAAGGGACATATATCAATGACCACAAAATAAATTTTACAGCTGTTCAATTCAGTATAAATCTCTTGCACCTAAATCTTAACTTTCTATTTAAAAAGTAAA-TCGTCTATTTGGGAAAGAC---TGAGAAA---GAAGTTATGTGATACTTACTTGTTTGACAGCCTGAGCTGAGACAATTGGAACTGACATCCGCACTGGGGTTGTATTAACAACCACTGGCTTTGCTTTTTAAAAAACAAAAGA chr4 - 94230402 46460993 46460992 46461431 47768972 47768971 47769410 439 CATACCTGTGTAACATACTGAGCTGGAAGGACTGCATAGCCAACATTTCCCGTGCCAGGTGCTGGTGCCAGTACAGTGCCTGGGGGCAGGTTAGTGAGGTTGGGCTGTATTTGTGGCAGTGGAGTGGCTGGCATAATTAGTCTTTGTTGGGGTTGACTTGTTGTAACTATCTGGGAAGTTGGGTTGAGGGGTTTGGGCACCACCTGGAAACAAAGTA-AGACTTC-ATGA----AAGAAGAATATTCC----------TTCAGAATACATATGTATTAATAGAACATTTCATGACTGTGCTGGAATTGGACTTTTCTTTCCAAGTGAAACAAGTCAGTAACATGCATTTATTCTGAGCTTACCTGTTTCACGGTCTGTGCTGGCACTATGGGAACAGACATCCGCACTGGGGTTGCATTCACCACCACTGGCTTTGCTGGTAACAAGACATCAGA ........x....................x........:..x.....:..:..x..x..x...........x...........x.......................x..:...........x.....x.....:..x..:.x...:..x..:..:..x..x..x.....:..x........:....xx.....x..x..x....::...x..:.x.-.x.:x..-....----..:.x:...x..x.----------.....x...x..x.x.xx:.x:x:..:x..xxx.xx..:.x:x::..x.::.-.:x...x.::::.x:.:..---.x..x..---.x.x....x:x:x:.....:.....x..:.:...x....:x..x..x.....x...................:...x..x...............xx.x.x..:...xx... 217M1D7M1D4M4D14M10D52M1I19M3I7M3I112M 318/432 73.6% 439/94230402 0.0% 23/432 5.3% 36478541 NA +17061 chr4 + 190214555 82946252 82946251 82946496 245 ACTAACCTTGCTGAAGAGGCTGAGTGTTTGTACTGGGATTCTGACTAACTGGCTGGGTTGAGCTACTGGCTGATGTGGCAGTAACAAGTCGGACATAATGAAACTTGCTTCCAGGCACTTGAATCTGCTGGACATTGGGAGCAGTTGCCAGAGGAATAATTGTCTTAAACTGTGATGTGCTCACTCCTCCAACAGTGATGGTCTGCACAGTTGATTTCACTGCCTATTAAACAATACAACATGGC chr4 - 94230402 46462152 46462151 46462396 47768007 47768006 47768251 245 ACTTACCCTGCTGGAGAGGCTGCGTATTCGTACTGGGATTCTGGCTGGCTGACTGGGTTGAGCTATTGGCTGTCGTGGCAGTAACAAGTCTGACATAATGGAACTTGCTTCCAGGTACCTGAATCTGCTGAACATTTGGAGCAGTTGCCAAGGGAATAATTGTCTTGAATTGAGACGTACCCACTCCTCCTACAGTAATGGCCTGTACTGCTGATTTCACAGCCTATTAAACCAACCAAGAGAGC ...x...:.....:........x..:..:..............:..::...:.............:......x:................x.........:..............:..:...........:.....x.............::..............:..:..x..:..:.:.........x.....:....:...:..x.:.........x...........x.xx...x.x:.. 245M 205/245 83.7% 245/94230402 0.0% 0/245 0.0% 36484100 NA +3170 chr4 + 190214555 82962140 82962139 82962205 66 GCCTTGAACTCCTGGACTCAAGCAATCTTCCCACCCCAGCCTTCCAAGTAGCTGGAACTACAAGTG chr4 - 94230402 18197131 18197130 18197196 76033207 76033206 76033272 66 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ...:x:.:..:....::.....::x.::x.xx:x.:.......:..................x... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 64765009 NA +3014 chr4 + 190214555 82965102 82965101 82965148 47 ATGTAAAAAATAATACTAAGAGTCTAAGAATAAGATTACAAAAGTCA chr4 - 94230402 30966035 30966034 30966081 63264322 63264321 63264368 47 ATGTAAAAAACAATTTTAAGAGTAAAAGAAGAAGATTGCAAAAGTTA ..........:...x:.......xx.....x......:.......:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 51999067 NA +9561 chr4 + 190214555 82970320 82970319 82970481 162 TTTTTACCTTATTTGGCGATTTCAAAGGTGAGATGGCTATTTTATTTGGTGTCTGT---GTTGTAGAATTTAAAGTTGATCCAATAACACCACTTTCAGATATTGTTATGGTCTTTGATGGAGTTCCGGGAGTAGACTGTGAAAGAACCCTACCTGCAAATGAGA chr4 - 94230402 46466361 46466360 46466525 47763878 47763877 47764042 165 TTCTTACCTTGTTAGGGGATTTGAGTGGAGAGATAGCTATCTTATTCGGTGTCTGTTGTGTTGTAGTACTCAAAGATGATCCAATAACTCCACTCTCAGAGATAGTTATTGTCTTTGGTGGTGTTCCTGGAGTAGATTGTGAAACAACCCTGCCTATAATCAAGA ..:.......:..x..x.....x.:x..x.....:.....:.....:.........---.......x.:.:....x............x.....:.....x..x.....x.......:...x.....x........:.......x......:...::..x::... 56M3I106M 131/162 80.9% 165/94230402 0.0% 3/162 1.9% 36503959 NA +9035 chr4 + 190214555 82978824 82978823 82979015 192 CTTTTTAAAT---CTAAAAGGAAGATAAATATTTAGCTTAATAAACTATAAAGAAATATAACCTGCAATAACTGGTGGTGAAACTTGAGTTGTCTGTCCTGTAACTGCTTTACTATTAATTGGTTTTGCAAAGATCAGCTTCGTGATTACTGGACCAGAGGTTGGCGTTCGAGGCTTCTTAGCAATCTGAAACAT chr4 - 94230402 46469240 46469239 46469427 47760976 47760975 47761163 188 CTCTTTGAATAGTCTTAAA--AAAACAACTGTAAAGCAAAACAAGTCA--AGTAAGTACAACCTGCAATGACCGGTG---ACACTTGAGTGGTCTGCCCTGTAACAGCTTTGCTATTGATTGGTTTTGCAAAGATGAGCTTGGTGATCACTGGGCCTGAAGTTGCAGTTCGGGTCTTCTTTGCAATCTGAAAGAT ..:...:...---..x...--..:.:..x.:.xx...xx..:..:::.--.:x..:..:..........:..:....---.x........x.....:........x.....:.....:.................x.....x.....:.....:..x..:....xx.....:.x......x...........x.. 10M3I6M2D27M2D27M3D115M 146/185 78.9% 188/94230402 0.0% 10/185 5.4% 36509584 NA +37306 chr4 + 190214555 82984156 82984155 82984923 768 TTTACCTGTACTGTTTTTAACTGTTGGGTCTGTAACACAGAGGGCTGAGTTGTAGTATTAATCAGTTGACTTCCTGGGGTCAATGCTGAGACACCAATGACAGGTTTCACCTCTGGCCTCCCTCCAATGGTAACTACTTTAATTTGCTGCGGTGGTAACTTAGCATCTCCTGACTGGGCCTGAGTTGTAACTTTCTGAGCCTGGGGTAGTTGGCTATGGGGTAGTGCTAAAACAATTGGTGAACCAGACTTGCCCAAAGTTGTTAAAATTAACTTCTGTCCATCTGGTTTAAGGGTCTGATTGCCAAGTTTAAGATCAGATGTCTGTGATACTTTGTTTAAAATAATCTGATTGGCTGATATAGTCACAGGAGTCTGAGCACCAAGTTTTTGAAGGCCACTTGGAAAAGCTGGTTTCACTGTGGTATTAGAATCTGCTTTAGTAATTGTGGTATTCACTGCAACTTGGTTAGTGTGGTTACTGTACACTGTGATTGGTT---------CCGTGGAAATGGGCGTGGCTGTAGAGTCACCAGTAGAATTTATGTTGACAATTTCTTCCAGTTCTGTCTCCATGGGA------------ATTGGGGATGAAACAATAACAGCCTCAATACTATCATCATCCACTAAAGTTATACCAGTGTCCATTATTTCCTCTGGAAGCAAACTATTCACCTCAGCTGGCACCACCTCCATGATCGTTCTCCCGCTAGAAAGTTGAT--------CAGGCACTGTAATAAAAGTTGAAAAATGAACAAGTTACTAGGTTTCAAAAGAT chr4 - 94230402 46474349 46474348 46475125 47755278 47755277 47756054 777 TTTACCTGTACTGTTTTTAATTGCTGGGTCTGCAAAACAGAAGGCTGGGCAGCAGTATTTATCAGCTGACTTCCTTGTGTTAAAGCTGAGACACCAACAACAGGTTTCACTTCTGACCGACCTCCAAT---AACAACTTTGATCTGCTGGCCTTGTACTTTGGAGTCTCCACCTTGGGTCTGGGACACAGTCTTCTGTGCCTGCGGGAGCTGGCAGCGGGGTAATGCTAAAACAATGGGTTGGCCAGTCTTGCCCAAAGTTGTTACAATCAGCTTTTGCCCATCTGGTTTAATACTCTGATTGCCTATTTTAAGGTCAGTGGTC---------TTGTTCAGAATAATCTGATTGGCTGATATAGTGACCGGAGTCTGAGCACCGAGTTTATGGAGACCACTTTGAAAGGCAGGCTTTACTACCGAATTTCCTTCAGTTTTTATAGTTGTGGTGTTTGCAGTCACATCGCCCGAGTGATTACTGGGTGCAGTAACTGGTTCTGCAGTGACCGTGGCTGTAGTTGTAACTGAAGCGTCACTGGTGGAGCTTATGTTCACTATTTCTTCCAGTTCTGTTTCCATGGGAATAGAATCTCCCATTGGTGAAGACACAATAACCGCTTCAATGCTGTCATCTTCCACCAGAGTTATACCAGTGTCCATTATTTCCTCAGGGAGCAAGCTGTTTACTTCTGCTGACACCACCTCCATTTTAGCAGTTGTGGCAG-----TGATGGCCGTAGCAGGTACTGCAACAATAGT--AAAAAT-AATAAGTTAGTGGCTTCCAAAAAAT ....................:..:........:..x.....:.....:.:x.:......x.....:.........x.x..:..x.............::...........:....:..xx........---...x.....:..:.....xxx.x...x:..:.x:.....xxx:....:...:.x:::.:::.....x.....x..x..:....x::......:............x...x::....x.................x...:.:...:..:.............x:x..........x.x......:....xx...---------.....:.:........................x..x..............:.....x..:..:......x....:..x..:..:...::x.x...xxxx..x.:...x:..:.......:..::.x.:x..x.x.::x.x...:......x:::.x..:.:.....---------......xx:.:.x:..::...x..x.....::..:..::.......x..x.................:.........------------.....x..x..x........x..:.....:..:.....x.....:.:...........................x..:.....:..:..:..:..x....:............xx.x.:xx.:x:.x:..-----....--------....:....:..:..x...--......-..:......x.:.x..:.....:.. 128M3D193M9D166M9I77M12I130M5D4M8I19M2D6M1D25M 573/748 76.6% 777/94230402 0.0% 49/748 6.6% 36509807 NA +3202 chr4 + 190214555 82998529 82998528 82998610 82 CCGTCAGAGAAAGAAAAGAAAGAAAGGAAGGAAGAGAGGGAGGGAAAGAAAAGAGAGAAAGAAAAGAGAGAAAGAGAAGAGA chr4 - 94230402 40472537 40472536 40472618 53757785 53757784 53757866 82 CTGTGGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGA .:..x:.:....:........:.......::..:..::..:...:::.::::.::xxx....::x..:.:.:.x:....... 82M 50/82 61.0% 82/94230402 0.0% 0/82 0.0% 42525992 NA +3194 chr4 + 190214555 83004398 83004397 83004462 65 CAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAACTGCACATCTGCGCTAGGACAGA chr4 - 94230402 33737985 33737984 33738049 60492354 60492353 60492418 65 CAGAAAAAAAAAAAAAAAAGATAGAAATGAAGAAAAAGTGTATTTCCCATCTTCCCCATGTCAAA ..:..................x.....x:.........x:x.:.x.x.....x.x.:.x.x..:. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 49266413 NA +3954 chr4 + 190214555 83010665 83010664 83010840 176 CCGGGGTGGCGACGTCGCCGTCGCCGCCGCCTCTGGTATGTCAGGGGCCGG-GATTGTATTTCGAAAGATCCGCCATTTTCACCTCGTCATCACCATCACAGCTCAGCAGCTTCCCCGACAGCCGGAGCCCGGGCCGCCGCCGCCGCCGCCACCACCAGTAACCTCCCCCTTCCTCC chr4 - 94230402 46490210 46490209 46490339 47740064 47740063 47740193 130 ccacggcggcggcggcgcgggggcggccg--------------ggagccgccggcccTATTTCGAAAGATCCGCCATTTTCACCCCGTCAccgccg---------------------------------cccgcccgcccccgccgcACCTGCCCCCGGCACCCGTCCTCTCGCTCC ..:x..:....:..x...x.xx..x....--------------..:....x-.:::x...........................:.....:.:..:---------------------------------..x.x.....x.......xx.::..x..:.:.x..x:..:..:x.... 29M14D8M1I44M33D48M 94/129 72.9% 130/94230402 0.0% 48/129 37.2% 36520455 NA +9641 chr4 + 190214555 83012580 83012579 83013037 458 CCAAGGATCCTTCGCCCCCCGCAACCCAGCTTCAGGGAAGGGGCGCGGCGGACCCCGCTGGCGGGTTCCCGCTCCCCGCCAAGGCCCAC--CGGCCCGGGCTCCCGGAGGGAGCGGTCCAGCGCTCTCCGCCCGCGCAGGCACTCGCAGC----GGGGGCCGGTTCCCCCTTCCCGCCA------GCCCGCCCAGGAGCCCCCATCCCGGGGGCTGACACTCACCAAAGCCGGCGGCGCCGCCGCCTCCTGGTCGCGCGGCGCTCCCTGG-GCTCCCAGCAGCAGCGGCGGCGGCGGCGCCTCCGAGACACAGACCAGGGTTTGTTCAAAATCACGCGCCCAGCCCCATTCCACCGCCGCATCCCATAATA------CGCTGGGCCCT---CCCCGCCCGCGCGCCCCT---CTCTGCCCGC--CCCTGCGCTCCGCACCCCGCCCCACGGCCGGCTTCCTTCGCTCCGCCTCTTCCGCGGCGCC chr4 - 94230402 46490344 46490343 46490788 47739615 47739614 47740059 445 CCGAGGGGCCGCCACCCCTCGCAGCGGAG-------GGCAGAGCGCGGCGCTCCCC----------CGCAGCTCGCCGCGTAGTcccgcggcgggccgggcct---------gcggcctgccgccggctgtcagcgc-----cccgccgctcccggccgccgcTCCTTCCCTCCCGCCGCCGCTTTCCCGCCCCTCGGCACTCACCGGGCGGGCGGGCGCTCC-----GCTGCCGCCGCCTCCTCTTCCTCGCTccgcgccgcgctccggtgccgcgcccggcggcggcggcggcAGTGCCCGCGAGGAGCCGCC--GCGTTTGTTCAAAATCACGCGCCCCGCGCCGTTCCCCCGCCGCATCCCATAATACTGCGCCGCGGCGCCCTGGCAACCGCCGGCGCAGCGCTTACCCCCTCCCGCTTCCCCGAGCTTCCGGTTCCGCCCCCTCACCG--TGGGGCCGCTCTAGCTCGCCGGCGCCGCC ..:...:x..x:.:....:....:.xx..-------.:x:.:........xx....----------:x.x....x....xx..x...:.--...x......::---------....:.::x...:xx.:.:.x....-----.:...x..----..xx....x.:.::..:.......:------x.......xxx:..x.:..:.xx.x....x.:.:...x-----..:.x..x....x..x.:....x.::x....x...x.:.:..-..:x.xxx.:..:...........:.:...:x....:x:.x.x.--.x......................x..x..:....x..................------...x.x.....---xx.....x....:x.x..---.:.:x.....--...:.x...:.xx:::.......x:x:...--.xxxx:.....::x...x:.x...x.... 29M7D20M10D23M2I12M9D25M5D8M4I25M6I38M5D42M1I44M2D54M6I11M3I18M3I10M2I30M2D29M 286/418 68.4% 445/94230402 0.0% 67/418 16.0% 36522236 NA +3259 chr4 + 190214555 83026076 83026075 83026187 112 TTGTCCCTGTTAACAAGTCTTTTT----ATTTTTAGCATTTCCTTTTTACATTTTCTTTTCATTTCTGCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 51354228 51354227 51354341 42876062 42876061 42876175 114 TCATTCCTGATACTCAGTTCCTTTCATCATTCTT--CCCTCTCTCATCAGATTTTTTTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGAAGA .::.:....x..x:x...:::...----...:..--.x:.::..:x.:.x.....:......x....:.xx:xx......x..x..x..x...:......:.........xx:... 24M4I6M2D80M 74/110 67.3% 114/94230402 0.0% 6/110 5.5% 31671848 NA +3021 chr4 + 190214555 83026102 83026101 83026176 75 TTTTAGCATTTCCTTTTTACATTTTCTTTTCATTTCTGCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 89437678 89437677 89437752 4792651 4792650 4792725 75 TTTTATCAGTCTTCTATTACATTTATTTATTACCTTTCTCTTCTGTGTTGTTTTTTGTTGTTGTTTTTTTTTTTT .....x..x.::::.x........x:..x.:.::.:.x:.:...x.x..x......x..x..x............ 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -6411576 -87818826 +5689 chr4 + 190214555 83035095 83035094 83035307 213 CGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACACTCGTTTTCTTTTTGGCTGCCAGAGGCCCCCGCATCCACCGCT---GAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTGAGTATT chr4 - 94230402 46490685 46490684 46490891 47739512 47739511 47739718 207 CGGCGCCCTGGCAACCGCCGGCGCAGCGCT-TACCCCCTCCCGCTTCCCCGAGCT----TCCGG----TTCCGCCCCCTCACCGTGGGGCCGCTCTAGCTCGCCGGCGCCGCCGCTCTATGGTAGGCGAGAAGATGGCGGCGGCGGTGCGGCAGGAGCTGGCGCAGCTGATGAACTCTAGCGGCTCCCACAAGGACTTGGCGGGAAAGTGAGTGCT ..:...:.....xxx.:.x.:...x:.x..-..x.x:...xx.:.:..:.x:...----..:..----::x.:.:.x:.:x.:x.xx...:..:xx..x:.x...xxx..:.....---x:.:x..x:::...........:..x.....:.....x:....x.....x.....:..x........:..:..:..::....x..x........::. 30M1D24M4D5M4D48M3I97M 132/204 64.7% 207/94230402 0.0% 12/204 5.9% 36544410 NA +6186 chr4 + 190214555 83045530 83045529 83045719 190 AAACCAAGGTATGTAGAAATGAATAAATACACATCAAAGTTTGCATTA----------------------GAAAATATAGTACCCTCAGA-ACA-----TTATTTTCATTTGGTATTGTTGT------AGGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGTAAGTGAAATGGA chr4 - 94230402 46492154 46492153 46492374 47738029 47738028 47738249 221 AAGATAAGatatatagacatatatatacacacat--atatatatattatataAAAGCAGGAACGGTGACTGAAAATGCTAT-CTCACAGATACAGGTGTTTATTTTTTTCTATTTTTCTCTTGTGAACAGATACCGTCAAATATTGGAAAAAGCAATTCAGCTGTCAGGTGCACAACAACTTGAAGCTTTGAAAGCTTTTGTAGAAGCGAGTAAGTGCATTTGA ..:x:...:...:....x..:x...x.:......--.x:.x.::....----------------------......::x:.-.:.x....-...-----.......:x.:.:x.x..x.:x.------..:..:.....:..x:..........x......:.:..x..x...x.......x....................:.....:........x.x.x.. 34M2D12M22I11M1D8M1I3M5I23M6I96M 140/187 74.9% 221/94230402 0.0% 37/187 19.8% 36553376 NA +12354 chr4 + 190214555 83049139 83049138 83049341 203 CTTATCTTTTTTTTTTTTTTAAACAAGTGGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAGCACAGCCAAAGAAATCTATCACTTCACCTTGGAAAAGATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTAAAAATCTAGAGA--AGTGGTTTT chr4 - 94230402 46493114 46493113 46493318 47737085 47737084 47737289 205 CTTTTCTTTCCTGTGTCTCTGAACTAGTGGTGAACGAGAATGTCAGCCTAGTGATATCACGTCAGCTGCTGACAGATTTCTGTACCCATCTTCCAAGTCTTCCTGACAGCACGGCCAAAGAAATATACCACTTCACCCTGGAAAAGATACAGCCTAGAGTCATTTCATTTGAAGAGCAGGTGAGAAATCAGTGATCAGGGGTTTT ...x.....::.x.x.:.:.:...x......:..:...........:..x.....x..:..x...:.......x.....:..:..x........x.:::.x.....:.....:...........x..:.........:..........x.......................:........:.:..x::..x..--..x...... 194M2I9M 163/203 80.3% 205/94230402 0.0% 2/203 1.0% 36556025 NA +8846 chr4 + 190214555 83049870 83049869 83049993 124 TATTATT--CCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATATGAGAAAGAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCTTTGGAAACAGGACAAAAGTATAGTAA chr4 - 94230402 46494487 46494486 46494611 47735792 47735791 47735916 125 TATTATTGTCTAGGTTGCTTCAATAAGGCAACATCTTGCATCCATCTACGAGAAAGAAGAAGACTGGAGAAATGCAGCACAAGTATTGGTGGGGATCCCTTTGGAAACAGGGCAAAAGTA-AGTAA .......--.:..........x.....:..:...........:..x..:..............:..............x.....:........:..:..............:........-..... 7M2I111M1D5M 110/123 89.4% 125/94230402 0.0% 3/123 2.4% 36555383 NA +3000 chr4 + 190214555 83055891 83055890 83055946 56 TCTCTTTTTAGGATTTCTTTTCTTTTCTTTTTTTTCTTTTTCTTTTTTTTTTTTTT chr4 - 94230402 21406207 21406206 21406262 72824141 72824140 72824196 56 TTTTTCTTTAATATTCACTGTATTTTCTTGCTTTTCTTTTTCTTTTTTTCTTCTTT .:.:.:....:x...:x:.x.x.......x:..................:..:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 61649684 NA +12513 chr4 + 190214555 83056905 83056904 83057082 178 TGTTTTTCTGTTACATCCTAGACAGTACAATGTAGATTATAAACTGGAGACTTACTTGAAGATTGCTAGGCTATATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCTTACATAAATCGAGCATCGTTGCTTCAGAATGAATCAACCAATGAACAATTACAGATACATTATAAGGTA chr4 - 94230402 46495063 46495062 46495240 47735163 47735162 47735340 178 TGCTTATCTGTTTCTTTACAGACAGTACAATGTAGATTATAAACTGGAGACCTACCTGAAAATTGCCAGGCTGTATCTGGAGGATGATGACCCAGTTCAAGCAGAAGCTTATATTAATCGAGCTTCCCTTCTTCAGAATGAATCAACAAATGAACAGCTACAAATCCATTATAAGGTA ..:..x......x.x.:x:................................:...:....:.....:.....:.................:.....:..:.....:.....:..x........x..x:.x.................x........::....:..x............ 178M 151/178 84.8% 178/94230402 0.0% 0/178 0.0% 36561842 NA +10890 chr4 + 190214555 83057210 83057209 83057413 204 TCTTGCTTTTTAATTTGTCCCCTAATTGAAATATTTTCCCTCTGTTAGGTATGCTATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACGATCTTAGCATCAGCAGGTAAA chr4 - 94230402 46496067 46496066 46496257 47734146 47734145 47734336 191 TCTTGCTTT----------CCTTTACCCGGACGTTTTCTTTCT---AGGTTTGTTATGCTCGAGTTCTTGATTATAGAAGAAAGTTCATTGAGGCTGCCCAAAGATACAACGAGCTGTCCTATAAGAGCATAGTTCATGAAAGTGAGCGACTGGAGGCACTGAAGCATGCTTTGCATTGTACTATTCTGGCATCAGCAGGTAAA .........----------..:.x.::x::.::.....::...---....x..:.....x..x....................:........:.....x.....:.....:.....x..:..:....xx.....:..:........:x....:.....x:.:..:...........:.....x..::.:............... 9M10D24M3D158M 152/191 79.6% 191/94230402 0.0% 13/191 6.8% 36561143 NA +4102 chr4 + 190214555 83058293 83058292 83058366 74 CTACAGCCTCAATCTCCTGGGCTCAAGTGATCCTCCCACTTCAACCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........:x..x..:.....:.......x.:.x.xx:x:...:...::...........:......x...... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 64861167 NA +13158 chr4 + 190214555 83063063 83063062 83063249 187 TTATTTCTCTTAGGGCAGCAGCGTTCTCGGATGCTAGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCCTATGGGATCCTAGAGAAAATGTATCTAGATAGGATCATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATGCTGATGCCTCACCAAAAAGCAACTACAGCTGATGGTA chr4 - 94230402 46496599 46496598 46496785 47733618 47733617 47733804 187 TTGGCTCTCCTAGGACAGCAGCGTTCTCGCATGCTTGCTACGCTTTTTAAGGATGAGAGATGCCAGCAGCTTGCAGCCTATGGGATCTTGGAGAAAATGTATCTTGACAGAATTATTCGTGGCAATCAACTGCAAGAGTTTGCAGCTATGCTAATGCCTCACCAGAAAGCAACTACAGCTGACGGTA ..:x:....:....:..............x.....x.....x..............:..:........:.....x............:.:..............x..:..:..:..:x.x..x........x.....:.....x..:.....:...........:.................:.... 187M 158/187 84.5% 187/94230402 0.0% 0/187 0.0% 36566464 NA +10214 chr4 + 190214555 83066361 83066360 83066638 278 ATTTTCAGAAAAAATGAT---GCATCT-TTTTAGAGTATAAAACTAGTTTCAAACTTGTA----------ACTGTCTTATTT-ATGTTTAAGGTTCCAGCATCTTGGACAGAGCTGTTATTGAACACAATTTGTTGTCTGCAAGCAAATTATATAATAATATTACCTTCGAAGAACTTGGAGCTCTTTTAGAGATCCCTGCAGCTAAGGTATCTTCTTGATTCCAATAC-----ATTTAAAAAAAAGTTAAGAGATGAAACTATTAAAATAATGAGAAAA--TAAAATAAATGTTGGAAA chr4 - 94230402 46496972 46496971 46497267 47733136 47733135 47733431 296 ACCTTCAGAAAAAAACACTTCACATCTGTTCTACAATATAAACCAAATATCTCATTTATATTAATGAATTGTTGTCTCGCTCGACCCATAAGGTTCCAGTATCCTGGACAGAGCTGTCATTGAACACAATTTACTATCTGCAAGCAAACTTTACAACAATATTACCTTTGAAGAGCTTGGAGCATTACTAGAGATCCCTGCAGCTAAGGTA----ATGGCCTCTAACACCTTTTGTTTAAAAAAAAAGTAATAAAAAGCAGCAGGGATGTAACAAGAATAGCTCTAGTCAATATTAGGAA .::...........xx.:---:.....-..:..x.:......x.x.:.x..xx.:..:..----------::.....:::.:-.:x:x...........:...:.............:..............::.:............:.x..:..:...........:.....:........x:.x:.......................----x.x.x:..:..:..-----:...........:x...x.:.x::x.x:.xx:.x:...::....x.--.xx.:.x...:..:.:.. 18M3I6M1I32M10I12M1I128M4D14M5I46M2I18M 199/274 72.6% 296/94230402 0.0% 26/274 9.5% 36569389 NA +7446 chr4 + 190214555 83068420 83068419 83068527 108 TTTTTTTTCCCCCAAT--AGGCGGAAAAGATAGCATCTCAAATGATAACCGAAGGACGTATGAATGGATTTATTGACCAGATTGATGGAATAGTTCATTTTGAAAGTAAG chr4 - 94230402 46497535 46497534 46497644 47732759 47732758 47732868 110 TTCTTTCTCCCTCATTTCAGGCAGAAAAGATAGCTTCTCAGATGATAACTGAGGGGCGCATGAATGGATTCATTGATCAGATTGACGGAATTGTTCATTTTGAGAGTAAG ..:...:....:..x.--....:...........x.....:........:..:..:..:...........:.....:........:.....x...........:...... 16M2I92M 92/108 85.2% 110/94230402 0.0% 2/108 1.9% 36570885 NA +9685 chr4 + 190214555 83075239 83075238 83075430 192 ACAGTTGCTGTGAATACAAAGGAATAATTTTAATTTTGTACATTTTTTTTCCCCTTAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTTGGAGAAAATTAGTCAAACAGCACCAGAATGGACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGA chr4 - 94230402 46498610 46498609 46498799 47731604 47731603 47731793 190 ACAATGGCGGTGAATTGCCAAGACTATGCTTTGTTTTCTGTGGTTTCCTTTTGC--AGCTCGTGAAGCTTTGCCAACTTGGGACAAGCAGATTCAGTCCCTGTGTTTCCAGGTGAACAACCTGCTGGAGAAGATAAGTCAGACAGCCCCAGAATGGACAGCCCAGGCAATGGAGGCTCAGATGGCTCAGTGA ...:.x..x......xxxx.:..x..xx:..x:....x.:::x...::..::x.--...x..x.....::.......x.....:........:..:..x..x........:.....:.....x:.......:..x.....:.....x..............x..:..x.....:..:............... 54M2D136M 143/190 75.3% 190/94230402 0.0% 2/190 1.1% 36576629 NA +3092 chr4 + 190214555 83077874 83077873 83077961 88 TCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAATTTGAAATAATGTTTAAGAATTTTCTGAAATGAATAATAGACACT--AAACCACAGA chr4 - 94230402 30020620 30020619 30020709 64209694 64209693 64209783 90 TTCTACTCAGACAAATAAAAAAAAAAACCAAAAATTGAAACTATTTACAATAGTTTGCTGATAAAAATAAGACAGGCTTAAACCCACAAA .:..x....:.x...x...........xx....x......:x..x.x:..x.:...x....x.x:.....x.x.x:..--..x.....:. 78M2I10M 63/88 71.6% 90/94230402 0.0% 2/88 2.3% 53057254 NA +3192 chr4 + 190214555 83087142 83087141 83087230 89 AATACTAAAATCAGATAAAGACATGACAAGAAAGGGAAAACTACAGTCTCTCATAAACATAGATGCAAAAATCCTTAACA--AAATATTAG chr4 - 94230402 9066557 9066556 9066647 85163756 85163755 85163846 91 AGTACTGGAATCAGAAAAAGAAATGAAAAGAAAACACTGACTGCAGTGGCTTTTAAATCCACAAACAGAAATTCTTAATCTTAAATATCAG .:....::.......x.....x....x......:x:xx:...:....xx..:x....:x:.x.x:..:....:.....:x--......:.. 80M2I9M 61/89 68.5% 91/94230402 0.0% 2/89 2.2% 74020585 NA +3099 chr4 + 190214555 83088695 83088694 83088766 72 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAGAAAGAAAAAGAAAAAGAAAAGAACAAAAAATT chr4 - 94230402 35652685 35652684 35652756 58577647 58577646 58577718 72 AAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAAAAAAAAAGATT .....x...x..........::........:x.::...:x...x:....x.x:.x.:::.:..x....:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 47436010 NA +3695 chr4 + 190214555 83119742 83119741 83119829 88 TCCTTCCCTTCCCTTTCCCTTTCCTTCCCTTTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTCTGAGACAGATTCTCACTCTGTTG chr4 - 94230402 9693768 9693767 9693855 84536548 84536547 84536635 88 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTTGACAAGGCCTCATTCAGCTG .:.....::.............::.:::.x:.:.:.x..:..x..x.......:...:::...:.:xx....::x:....:..x.:.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 73425974 NA +6720 chr4 + 190214555 83128388 83128387 83128533 146 TTATATGCTCTTTTGTACTTTCTCTCTCCTTGCTTCCTCCTT--CCTTCCCCTTTCCCTTT--CTCTTCCCTTCCCCTTCCCCTTCCCCTTCCCTGCCCCT--TCCCCTTCCCTTCCCCTTTCCCGTTCCCTTTCTCTTTCCCTTTCCCTTT chr4 - 94230402 20755300 20755299 20755451 73474952 73474951 73475103 152 ttatttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttctcttttcttttcctGATTCCTTTCTCTTCCCTTTTCCAGATCCCTTTCTCTTTCCTTTTCCCTTT ....x.x::.....x:x:..:..:.::.:..x.:.::.....--....::.....:.....--..:....:..:..:..:..:..:.:...::..x::...--.:..:...:......:.....x.x...............:......... 42M2I17M2I38M2I49M 106/146 72.6% 152/94230402 0.0% 6/146 4.1% 62373088 NA +3875 chr4 + 190214555 83128396 83128395 83128545 150 TCTTTTGTACTTTCTCTCTCC------TTGCT--------TCCTCCTTCCTTCCCCTTTCCCTTTCT-----CTTCCCTTCCC----------------CTTCCC-------CTTCCCCTTCCCTGCCCCTT----CCCCTTCCCTTCCCCTTTC--CCGTTCCCTTTCTCTTTCCCTTTCCCTTTTCCTTTCATTTT chr4 - 94230402 92912796 92912795 92912993 1317410 1317409 1317607 198 TTTTTGGCATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTT .:...x.:.:..::....:..------.....--------::......xx:..:.....:..x...:-----..x.......:----------------......-------..::.:.......x..:.:.----.x::.:.x....:.x...:--.::..:.:...........:.....:.:.....:.x..:.. 21M6I5M8I27M5I11M16I6M7I20M4I19M2I41M 108/150 72.0% 198/94230402 0.0% 48/150 32.0% -9784400 -84446002 +3347 chr4 + 190214555 83128461 83128460 83128547 87 TTCCCCTTCCCCTTCCCTGCCCCTTCCCCTTCCCTTCCCCTTTCCCGTTCCCTTT--------CTCTTTCCCTTTCCCTTTTCCTTTCATTTTTT chr4 - 94230402 87463519 87463518 87463613 6766790 6766789 6766884 95 TCCCATTTTTCTTCCCCAGATTCTTACTCCTGCTGTTCCCTTTCCCCTTCCATTTCACATTGCCCCTTCCTTTTTCTCATTTCCTTTAATTTTTT .:..x:..::.:.:...x.x::...x.:.:.x.:x.:.........x....x...--------.:...:.::....:.x........x....... 55M8I32M 60/87 69.0% 95/94230402 0.0% 8/87 9.2% -4335058 -89895344 +3356 chr4 + 190214555 83128462 83128461 83128540 79 TCCCCTTCCCCTTCCCTGCCCCTTCCCCTTCCCTTCCCCTTTCCCGTTCCCTTTCTCTTTCCCTTTCCCTTTTCCTTTC chr4 - 94230402 28727284 28727283 28727362 65503041 65503040 65503119 79 TCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCTTCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTCC .......x...:.:.:....::..:...x.x.:.x::.:.::...:.:.x....x.....::...:.::...::.:.:. 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% 54401178 NA +3002 chr4 + 190214555 83143889 83143888 83143947 59 TAAAGAATTTTTTTTGTTTTTTGTTTTTTTTTTTTGTTTTTTTGTTTTTTTGTTTTGAG chr4 - 94230402 76163220 76163219 76163278 18067125 18067124 18067183 59 TAAAGAATGTTTTTTCTGTCTTCTCGTTTTCTTTAGTTTTTTTTTCTTTTTGACTTGGG ........x......x.x.:..x.:x....:...x........x.:......x:...:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 6980669 NA +3905 chr4 + 190214555 83206229 83206228 83206311 83 CTGCAACCTCCACCTGCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx.x..x...........::x...x.xx.x........:............:......x....--:....::.. 72M2D9M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 65009103 NA +3094 chr4 + 190214555 83220227 83220226 83220263 37 TTTTTTGTTTTGTTTTGTTTTTTGTTTGTTTGTTTTT chr4 - 94230402 23073764 23073763 23073800 71156603 71156602 71156639 37 TTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTT ....:.............x.................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 60146463 NA +3005 chr4 + 190214555 83220230 83220229 83220285 56 TTTGTTTTGTTTTGTTTTTTGTTTGTTTGTTTTTGTTTGAGACAGAGTGTTGCTCT chr4 - 94230402 79586940 79586939 79586995 14643408 14643407 14643463 56 TTTGGGTTGTTTTTTTTTTTGTTTGTTTGTTTTTCCTTTAAACAGGCTCTTCCCCT ....xx.......x....................x:..x.:....:x.x..x.:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 3633290 NA +3046 chr4 + 190214555 83226877 83226876 83226930 54 CACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 15574793 NA +3069 chr4 + 190214555 83226879 83226878 83226930 52 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652135 26578268 26578267 26578319 52 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA .....::...x...:...:..xx.x.:.:.:.:................... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 15574795 NA +3192 chr4 + 190214555 83226883 83226882 83226936 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...............x..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 15574799 NA +3322 chr4 + 190214555 83276001 83276000 83276082 82 AATATATATTATATATAATATATATTTTTATATAATATATAAAATATATATTATATATAATATATATTTTATATATAATATA chr4 - 94230402 20596511 20596510 20596589 73633814 73633813 73633892 79 aatttgtattataaaaCAGATAC---TTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACA ...x.:.......x.xx.x...:---......x..:.....x..........:....xx..:..x..x.......x.:..:. 23M3D56M 60/79 75.9% 79/94230402 0.0% 3/79 3.8% 62679490 NA +3624 chr4 + 190214555 83279936 83279935 83280018 83 CTGTGGCTTCAAACTCCTGAGCTCAAGTGATCCTCCTGCCTCCGCCTCCCCAGTAGCTGGAACTACAGGTGCAAGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:::..::x..:..:...:.:.......x.:.x.xx.x...x....::.x................x.....--....::.. 73M2D8M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 65082810 NA +3239 chr4 + 190214555 83299362 83299361 83299421 60 TCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAGAAAATGTCTACAGAGGCTATGT chr4 - 94230402 45107781 45107780 45107840 49122563 49122562 49122622 60 TTAAAGAAAAAGGGAAAAAAAAAAGAGAGAAGAAAGCAAACATTTCCACAGAGAATACAT .:...:.....:::..........:.:.........x:..x..x..:......:x..::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 38191581 NA +3624 chr4 + 190214555 83303625 83303624 83303707 83 CTGCAGCCTCAACCTCCTGGGCTAAAGCGATCCTCCTGCCTCAGCCTCTCATGTAGCTGGGACCACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..x..:.....:.x...:.x.:.x.xx.x........:...x........:..:...--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 65106499 NA +3066 chr4 + 190214555 83316870 83316869 83316902 33 TTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT chr4 - 94230402 71168438 71168437 71168470 23061933 23061932 23061965 33 TTTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 12148432 NA +3248 chr4 + 190214555 83316874 83316873 83316920 47 GTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTTTGA chr4 - 94230402 20380498 20380497 20380543 73849860 73849859 73849905 46 GTTATT-TTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTAA ...:..-...........................x........:.:. 6M1D40M 42/46 91.3% 46/94230402 0.0% 1/46 2.2% 62936376 NA +3171 chr4 + 190214555 83316879 83316878 83316918 40 TGTTGTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTTT chr4 - 94230402 84067045 84067044 84067084 10163319 10163318 10163358 40 TGTGGGTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTCT ...x.x................................:. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% -750166 -93480236 +3119 chr4 + 190214555 83344271 83344270 83344329 59 GGAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAGGGAAAAAAGAAAAAAGTTA chr4 - 94230402 27809322 27809321 27809380 66421023 66421022 66421081 59 GGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTA ...:...::::..:.x:....x.......:.:.x.......:...:...:.....x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 55534949 NA +3142 chr4 + 190214555 83349927 83349926 83349999 73 CTGCAACCTCCTCCTCCCGGATTCAAGCCACTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAAGTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xxxx..:.:..:......:xx:..x.xx.x........::.............x....x..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 65152801 NA +3095 chr4 + 190214555 83356431 83356430 83356501 71 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAACAAAAAAGAAAGTTGTTATCTTTAGTTTCTCTAGA chr4 - 94230402 70167882 70167881 70167952 24062451 24062450 24062521 71 AAAAAAAAAAAGGCAAAAAAAAAAAAAAGGTAGAAATGCAAGAGAGACTTCTGAATTTAATTTTACCTTGA ...........::x..............:.x.....::x..:...:.x..x.x.x:..x.x...x:..x.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 13188549 NA +3391 chr4 + 190214555 83365842 83365841 83365909 68 TCTGGGCTCAAGCAATCCTCCCCACTCAGCCTTCCAAGTAGCTGGGATTACAGGCACACACCACTGTG chr4 - 94230402 18197141 18197140 18197206 76033197 76033196 76033262 66 TCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ......:.....::x.:.x.xxx:.........:...........:.:....--.:::.......... 52M2D14M 50/66 75.8% 66/94230402 0.0% 2/66 3.0% 65168701 NA +3920 chr4 + 190214555 83415690 83415689 83415778 89 TGGCATAATCTTGGCTCACTACAACCTCCACCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCTTCCTGAGTAGCTGGGATTACAGGTG chr4 - 94230402 18197114 18197113 18197196 76033207 76033206 76033289 83 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ......x..x..------.....:..:xx.x..:.............x...x..x.x......:.::::.........:.:....x... 12M6D71M 63/83 75.9% 83/94230402 0.0% 6/83 7.2% 65218576 NA +3371 chr4 + 190214555 83419062 83419061 83419156 95 CAAGCTTGTCCAACCTGTGGCCCACAGGCCACATGCGGCCCAGGATGGCTTTGAATGTCACCCAAAACAAATTGGTAAACT-TTCTTACAACACCA chr4 - 94230402 48654658 48654657 48654751 45575652 45575651 45575745 94 CAGGCATATCCAACCCATGATCCACAGACCACATGAGGCCCAGCACAGCTTGCAATTTGG--Caacctaaattggtgtgttattttcacaaaaaca ..:..x.:.......::..::......:.......x.......x.::....xx...x.x:--...xx:........:x::.-..:.:....x.x.. 60M2D19M1I14M 65/93 69.9% 94/94230402 0.0% 3/93 3.2% 34764404 NA +3502 chr4 + 190214555 83439143 83439142 83439216 74 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCCGCCTTAGCCTCCCGAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::..........x...x.xx.x..:.....::.:.......:.:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 65242017 NA +3074 chr4 + 190214555 83450179 83450178 83450259 81 GAAGAATAGATGGATCTATGTATGTTCAATATACAGTTAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGA chr4 - 94230402 59842598 59842597 59842676 34387727 34387726 34387805 79 GAAGCACAGACTAATTTCTACAATATC--TCTACTGTTTACTTTAAAAAAAAAAAGAAAAGAAAAAAAGTAAAGCAGCAGA ....x.:...:x:..:.x.::.xxx..--.x...x...x.x..............:....:.......:x...:x...... 27M2D52M 57/79 72.2% 79/94230402 0.0% 2/79 2.5% 23607581 NA +3029 chr4 + 190214555 83450216 83450215 83450262 47 TAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGATCA chr4 - 94230402 17004048 17004047 17004094 77226309 77226308 77226355 47 TGAGTTTATGAAAAGAAAGAAGAAAAAGAAAAAAAAAAAGCACACCA .:......x:....:...:..:.....:..............x.:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 66446168 NA +3010 chr4 + 190214555 83450220 83450219 83450264 45 TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGATCATT chr4 - 94230402 34376851 34376850 34376895 59853508 59853507 59853552 45 TTTTAAGACAAAAACAAGAAAAAAAAAAAAAAAGAGCAAATCATT ...x..:.x.....x..:...............:....:...... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 49073369 NA +3047 chr4 + 190214555 83454209 83454208 83454245 37 ACCAAAACAAACAAACAAACAAAACCCCCAAAAAACA chr4 - 94230402 31098348 31098347 31098384 63132019 63132018 63132055 37 ACAAAAACAAACAAACAAAAAAAACCCCCAAAAAACA ..x................x................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 52355861 NA +5073 chr4 + 190214555 83477543 83477542 83477862 320 GCCATGAGATGTCTCGTCTGAACTGGAAACCCTTTGTATATGACGC-CTTGCCTCTATCACTGCTGAGTTTGG--------------------------------------------------------------------AACTTTCCCCATGGACCTTGCCAAAACACGACTTCAGGTAGGTTCAAGGCCAAAGCATTGATGTCCGTTTCAAAGAAACAAAATATAGACGGATGTTTCATGCTTTGTTTTGGATCTATAAAGCGGAAGGTGTATTGGCTCTGTATTCAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGCTCCTGTTTTGCAAAGACAAGCATCATATGGCACCATTAAAATTGGGATTTACCAAAGCTTGAAGCAATTATCTGTAGAACGTTTAGAAGAT chr4 - 94230402 92677645 92677644 92678192 1552211 1552210 1552758 548 GCCATGCCATGTCCGCGCTGAACTGGAAACCCTTTGTGTATGGCGGGCTCGCCTCCATTGTGGCCGAGTTCGGTGAGGTGGGGCGGGCGGCGGGCATCAGCGCGGGGCCGGCGGGGCGCTGACGGCCGCTCTCCCCGCAGGCACGTTCCCCGTGGACCTGACCAAGACGCGCCTGCAGGTG----CAGGGCCAGAGCGCCGATGCGCGGTTCCGCGAGGTGCGCTACCGCGGCATGTTCCACGCCCTGTTCCGCATCTGCCGCGAGGAAGGCGGCCGCGCCCTCTACTCGGGGTGAGTACGGAGCCGGGGGGGCTGAGGGGCTGTGCGGTCTCGGAGGTGGCGGAGCCGCTGCGGGGGTGGTCGCGGCACGAGGCGCCTCCCGGCGGTCGGCGCTGCGCCCCGGGGTGCCGCCCCGCTGGGAGCTTCAGCTGCCGCCGTTCGTTCCCCCGCTCAGGATCGCCCCGGCGCTGCTGAGACAGGCGTCCTACGGCACCATCAAGATCGGCATCTACCAGAGCCTGAAGCGGCTGTTCGTGGATCGCCTGGAAGGT ......xx.....:xxx....................:....:..x-..:.....:..:::x..:.....:..--------------------------------------------------------------------x..x......:.......x:....:..:..x..x.....:----..:.....:...:::....:x..x...x:x..::::x:x..:x.xx.x.....:..:..::....::.x....::x:x.x......:.xx:xx..:..x..:..:..:-------------------------------------------------------------------------------------------------------------------------------------------------------------------..:..:..x.:x:...x:.....:..:..x..:........:..:..:..x..:.....:...:......:::.:.::..:..x..::.:....:. 46M1I26M68I40M4D108M163I96M 211/316 66.8% 548/94230402 0.0% 236/316 74.7% -9200102 -85030300 +4863 chr4 + 190214555 83477859 83477858 83477953 95 AGATGAAACTCTTTTAATCAACATGATCTGTGGGGTAGTGTCAGGGGTGATATTTTCCACTATAGCCAATCCCACCGATGTTCTAAAGATTCGAA chr4 - 94230402 92679682 92679681 92679776 1550627 1550626 1550721 95 AGATGAAACGTTATTAATCAACGTAATATGTGGAGTGGTTTCAGGGGTGATCTCCTCTGCACTTGCCAATCCAACAGATGTGCTGAAGGTAAGAA .........x:.x.........:.:..x.....:..:..x...........x.::..::.xx.x........x..x.....x..:...:.xx... 95M 71/95 74.7% 95/94230402 0.0% 0/95 0.0% -9201823 -85028579 +7128 chr4 + 190214555 83477945 83477944 83478060 116 AGATTCGAATGCAGGCTCAAGGAAGTTTGTTCCAAGGGAGCATGATTGGCAGCTTCATCGATATATACCAACAGGAAGGCACCAGGGGTCTGTGGAGGAGTGTGGTTCCAACTGCT chr4 - 94230402 92680013 92680012 92680126 1550277 1550276 1550390 114 AGATTCGAATGCAAGCTCAAGGCAATTTGTTCCAGGGTGGCATGATTGGCAGCTTCATCGATATCTACCAGCAAGAGGGTACCCGAGGCCTCTGGAGG-GTG-AGCACCAGCTGCT .............:........x.:.........:..x:.........................x.....:..:..:..:...x.:..:..x......-...-:.:x...:..... 98M1D3M1D13M 95/114 83.3% 114/94230402 0.0% 2/114 1.8% -9202068 -85028334 +7241 chr4 + 190214555 83478163 83478162 83478310 148 TTTGTTTCCAGCTTTACATATGGTTTGGCTGGGGCTCTTGCCTCTAATCCAGGTGATGTGGCAGGCACTCACGTGATGAACCAGAGGGCAATCGTGGGACATGTGGATCTCTATAAGGGCACTTTGGATGGTATTTTAAAAATGTGGA chr4 - 94230402 92681952 92681951 92682099 1548304 1548303 1548451 148 TCTAGTTCCAGTTTTACGTGTGGGCTGGCAGGGGCGATTGCCTCCAACCCTGTGGATGTGGTGCGGACACGGATGATGAACCAGCGAGCGATAGTGGGCAGTGTGGAGCTCTACAAGGGCACTCTGGATGGTCTTGTGAAGGTAAGGA .:.:x......:.....:.:...x:....x.....xx.......:..:..x.xx.......::x.x..x.:x:...........x.:..:..x.....xx:......x.....:.........:........x..x.:..::.:x... 148M 107/148 72.3% 148/94230402 0.0% 0/148 0.0% -9203789 -85026613 +3396 chr4 + 190214555 83480372 83480371 83480418 47 AAAACAAAAACAAAATGTATATATACACATATATATACACACACACA chr4 - 94230402 60979354 60979353 60979400 33251003 33251002 33251049 47 AAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ........x.x...x.x..................:........... 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 22501018 NA +3316 chr4 + 190214555 83490423 83490422 83490497 75 TATTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGGATCTCAATCCTGT chr4 - 94230402 40100183 40100182 40100257 54130146 54130145 54130220 75 TGTTTAAGTTATTTCTGTATCTTCTCCACCCATTTTTTTTTTCTTTTCTTTTTCTAGACTAAATCTCAGTTCTGT .:...x.:..x...:.x.x.:..:.::x:::x..........:....:.....:.....x::......:.:.... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 43390240 NA +3198 chr4 + 190214555 83494017 83494016 83494092 76 TGTCTCAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 7997245 7997244 7997320 86233083 86233082 86233158 76 TGCCTCAGAAGAAAAAGGCAAAAAGACCAAAAAGAGAACACGGAGGCGTAGAACAAAAAACGAAGGGAAGAAAGAA ..:....:..:.....:.x.....:.xx:......:.:x.x.:.:.x:x::..x...:..x...:.:......... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 75496772 NA +3230 chr4 + 190214555 83494021 83494020 83494107 87 TCAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAGGCCA chr4 - 94230402 82357145 82357144 82357232 11873171 11873170 11873258 88 TCAGCAGGAAAAAAAAAAAAAACATGAAGGTAAAATTGTCTGCAATGGAAACAGGAAGGAAAAAAAGAGGGAAAGAAAAGGAAAGCCA ...:x.::.....:........x.x:..:.x..:.xx.xxx.x..-.:..:x.:...:....:.....::.........::..:.... 45M1I42M 59/87 67.8% 88/94230402 0.0% 1/87 1.1% 1136876 NA +3035 chr4 + 190214555 83498338 83498337 83498450 113 AGGAGAGGAGAGAGAGAAAGAAAGAAGAGAGGGAAAGAAAGAAAAAGGAAAGAAAGAAAGAAAAAGGGAAGAAAGAAAAAGAGAGAGAGAGAAAGAAGGAAAAAAAGAAGGAA chr4 - 94230402 29503819 29503818 29503931 64726472 64726471 64726584 113 AAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAA .::.....::..::.:.:.........x...::.:::...:....xxxx.x:....:....:...x....x.x.:.x:.x:.x.::x...:.::x.xxx....xx.x:..... 113M 67/113 59.3% 113/94230402 0.0% 0/113 0.0% 53994519 NA +3348 chr4 + 190214555 83498361 83498360 83498416 56 GAAGAGAGGGAAAGAAAGAAAAAGGAAAGAAAGAAAGAAAAAGGGAAGAAAGAAAA chr4 - 94230402 43294277 43294276 43294332 50936071 50936070 50936126 56 GGGGTGGGGGGAAGGGAGAAAGAGGAAAGAAAAAAAAAAAAGGGGGGGAAATAAAA .::.x.:...:...::.....:..........:...:....:...::....x.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 40204084 NA +3115 chr4 + 190214555 83498389 83498388 83498449 61 GAAAGAAAG---------AAAAAGGGAAGAAAGAAAAAGAGAGAGAGAGAAAGAAGGAAAAAAAGAAGGA chr4 - 94230402 37322375 37322374 37322444 56907959 56907958 56908028 70 GAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGA ........:---------......::..:...:...............::.x.:....::...:.:x... 9M9I52M 47/61 77.0% 70/94230402 0.0% 9/61 14.8% 46176014 NA +4199 chr4 + 190214555 83501802 83501801 83501951 150 TCTCTTTCTTCTTTCTTTCTC--TTTCTTTCTTTCTTT--------------------CTTTTCTTTCTTTCCTTCCTTC--TTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTT------------------TCTTCTTTCTTTTCTTTCTTTCTTCTTTCTCTGTCTCTCTCTC chr4 - 94230402 15857400 15857399 15857590 78372813 78372812 78373003 191 TCTTATTCTCCTTTCCTTCTTGGTTTTATTCTTTCCTTGTGATCTCTACCGAAGCTGGCTTTGCTCTTAAACCTCCCTTTGATTTCTCTGCTTCTCTAATTCCTTTCCTTCCCTCTTTGTTTTCATTCCCTTTACTTGATGCCAGAGCCTCTATTTTCAATTCTTCCCACCCCTGTGCTCTATC-CCCTCTC ...:x....:.....:....:--...:x.......:..--------------------....x..:.:xxx...:....:--.....:.x.....:.xx............:......x.....x....:.------------------...x:....xx.....:.:x:.:::x.x....:..-.:..... 21M2I15M20I22M2I49M18I35M1D7M 109/149 73.2% 191/94230402 0.0% 43/149 28.9% 67644402 NA +3116 chr4 + 190214555 83501831 83501830 83501945 115 TTTCTTTCTTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTT--TCTTTCTTTCTTCTTTCTCTGTCTC chr4 - 94230402 3338200 3338199 3338313 90892090 90892089 90892203 114 TTTTTTCCTTTGCTATCTTTGCTTCCTGCTTCTTTTCTTTCCTTTCTTGCTTTTCAAACCTGATGCAT---ATTACTTATTTTTTGCTTTGATTATTCTATTTTCCTTTTAAATCTC ...:..:....x..x.....x......x...::....:...:..::..x....:.xxx:..xx.x.x.---x..x...x:..:..x....--.:x....x.:...:..:.xx:.... 68M3D19M2I25M 75/112 67.0% 114/94230402 0.0% 5/112 4.5% 80163631 NA +4223 chr4 + 190214555 83501835 83501834 83501973 139 TTTCTTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTTTCTTTCTTTCTTCTT-TCTCTGTCTCTCTCTCT-----CCCTTTCTCTCTCTTTTTTTT chr4 - 94230402 45185593 45185592 45185737 49044666 49044665 49044810 145 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTT ...::::....:..xx:..:xx..:.:.x:...x..........:.....x..:.::x::.:.:.......:..xx:....:.:.....:x...xx.x...-..x..:::.x...:...-----...:.xx.....:x..:.... 101M1I17M5I21M 90/139 64.7% 145/94230402 0.0% 6/139 4.3% 38316242 NA +3927 chr4 + 190214555 83501839 83501838 83501964 126 TTTTCTTTCTTTCCTTCCTTCTTTCTTTCCTTCTTTCTTTCCTTTCCTTCTCTCTTTCTTTTCTTTCCTTTCTTCTTTCTTT---TCTTTCTTTCTTCTTTCTCTGTCTCTCTCTCTCCCTTTCTCTCT chr4 - 94230402 45185593 45185592 45185711 49044692 49044691 49044810 119 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTC--------TTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCT--TTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT .....::....:.:xx:..:xx..:.:.x....x.......:....--------....x...:.:x................---....:.:.--....:x..:x..x::....x..x.:.x...:... 46M8D28M3I8M2D34M 83/116 71.6% 119/94230402 0.0% 13/116 11.2% 38316246 NA +3454 chr4 + 190214555 83521044 83521043 83521159 116 CATGCTGAGTAATGTCTTGTCTTATCTTTTCTTTTCTTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 43081911 43081910 43082024 51148379 51148378 51148492 114 CATGCTTCAAAATGC--TGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ......xx:x....:--....::x:......:...:........:x:.:.::x.x...:x..::xx..:.xxx::.:.x.........:...:...:...x.xx:.::........ 15M2D99M 72/114 63.2% 114/94230402 0.0% 2/114 1.8% 40439133 NA +3105 chr4 + 190214555 83521087 83521086 83521176 90 TTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTT chr4 - 94230402 41570552 41570551 41570641 52659762 52659761 52659851 90 TTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ....x...x:.x.:...:.x:......:...............xx..:x:x.xx:::x...:::....:.xxx........:...xx... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 41950535 NA +3051 chr4 + 190214555 83521095 83521094 83521175 81 TCTTTTCTTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCT chr4 - 94230402 43081928 43081927 43082008 51148395 51148394 51148475 81 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCT ..::.:......:......:.:...:x.::..:x.x..:.x..::xx:.:.xxx::.:.x.........:........... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 40439167 NA +3130 chr4 + 190214555 83532543 83532542 83532586 44 AAAAATATATATATATATATATATGTATACACACACACACATAC chr4 - 94230402 88147187 88147186 88147230 6083173 6083172 6083216 44 AAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:...............:.x.:.....:.:..........:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% -4614644 -89615758 +3189 chr4 + 190214555 83532766 83532765 83532863 98 TATATATATACAGTATACTATATGTATATACACACTTATATATACACTATATATGTGTATATATA---CATACATACTAT-ACATACAGT-ATATATACAATG chr4 - 94230402 64360142 64360141 64360244 29870159 29870158 29870261 103 TATGTGTTCATAGCAGTCCATATATATACACACACACATATATAAACTATTCATGTGTGAATATAGTTCATGTGTGCTCCAACAACCAGTGATATACCTAATG ...:.:.x:.:..:.xx.:....:....:......x:.......x.....x:......:x.....---...:::.:..x:-...xx....-.....:x:.... 65M3I12M1I9M1I12M 69/98 70.4% 103/94230402 0.0% 5/98 5.1% 19172624 NA +3032 chr4 + 190214555 83533008 83533007 83533125 118 TACATACATATATATGTAGAGATCAGCTGTTTGTGTGTATATATATATACACACATATATATACATATGTGTATATATATGCATATATATACACATATATACACATATGTATGTATAT chr4 - 94230402 4417317 4417316 4417434 89812969 89812968 89813086 118 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .....:.x.:.x:..:x.:.xx.x..x.x.xx:::.:....:.:.:.:.....x:x.:...::...:x.x..x.::.:...:..xx.x::.:x:.x............x...x..... 118M 70/118 59.3% 118/94230402 0.0% 0/118 0.0% 79115691 NA +3750 chr4 + 190214555 83533036 83533035 83533149 114 GTTTGTGTGTATATATATATACACACATATATATACATATGTGTATATATATGCATAT------ATATACACATATATACACATATGTATGTATATA-TATGTGTACATATACA-CACAGGT chr4 - 94230402 68558011 68558010 68558131 25672272 25672271 25672392 121 GTTTGTAAGAAGA-ATGCATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATATATCCCAGGT ......:x.x.x.-..::...::....:.x::..:......:..:.....:.......------..x.....x:.:........x.x.x.x.x...:-:..:.:........:.-.x..... 13M1D44M6I33M1I16M1I7M 82/113 72.6% 121/94230402 0.0% 9/113 8.0% 14975025 NA +3155 chr4 + 190214555 83533040 83533039 83533102 63 GTGTGTATATATATATACACACATATATATACATATGTGTATATATATGCATATATATACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....::.:.:.:.:..........:..:......x::xx..x:..:..:..::......... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 36437876 NA +3006 chr4 + 190214555 83533090 83533089 83533171 82 ATATATATACACATATATACACATATGTATGTATATATATGTGTACATATACACACAGGTGTGTAAGTGTATATATATACAG chr4 - 94230402 35554961 35554960 35555042 58675361 58675360 58675442 82 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAG ......x.:x:::.:.:.:........x:............::....x.x.:::::..:x:.x:....x:.x...:.x.... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 47978129 NA +3100 chr4 + 190214555 83571675 83571674 83571726 52 TATATATGTGTATATATATATATACACACACACATATATATACACACACATA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .:.:.:.:...:..x.:.x...........:x.....:...:.......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 34156923 NA +3055 chr4 + 190214555 83574604 83574603 83574683 80 TGACTTGTAAAGTAAAATGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAATT chr4 - 94230402 28307724 28307723 28307797 65922606 65922605 65922679 74 TGACTGATAAAATTA------TTTCCTCTTTTTTTCCTCTTTCCATTCCTTTTCCTTTTTTTTGTCCTTTCTATAGAATT .....x:....:.x.------...::.:.......::.:...::x..::....::........x.::...:.x....... 15M6D59M 52/74 70.3% 74/94230402 0.0% 6/74 8.1% 55266880 NA +3032 chr4 + 190214555 83574624 83574623 83574691 68 ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAATTAGAGTTTT chr4 - 94230402 30174518 30174517 30174585 64055818 64055817 64055885 68 ATTATTCTTTTTTTTTTTTTTTTTCTCTGTGATTCTCTATTTTTGTGTTTGTTCTGAATAAAACTTTT ...x..:.................:.:.x.xx..:.:.x.....x.x...x..:x....x.:.x.... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 53400106 NA +3150 chr4 + 190214555 83574648 83574647 83574699 52 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAATTAGAGTTTTACCAATTT chr4 - 94230402 46673277 46673276 46673328 47557075 47557074 47557126 52 TTTCTTTTTCTTTTTTTTTCTTTTTTGTTTAAAAATAAAGCTTTGACAATCT ...:.....:.........:......x....:..x..:..:...:x....:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 36901371 NA +3259 chr4 + 190214555 83576533 83576532 83576589 57 TCCCCGATTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTG chr4 - 94230402 18197140 18197139 18197196 76033207 76033206 76033263 57 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG .:.:x.:......:.x...x..x.x........::.............:....x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 65379393 NA +3202 chr4 + 190214555 83578848 83578847 83578936 89 ACTTACTTTTTTCCT---TCCTTCCTTCCTTCCCTCCCTTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTT chr4 - 94230402 24861591 24861590 24861679 69368724 69368723 69368812 89 ATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCA---CCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTT .:..x....x.:...---..x..:...:.........x---..x::.....:.....:.:......:.......::.:x.::x..:xx.... 15M3I20M3D51M 61/86 70.9% 89/94230402 0.0% 6/86 7.0% 58717257 NA +3245 chr4 + 190214555 83578883 83578882 83578955 73 TTCCCTCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTT chr4 - 94230402 2110785 2110784 2110857 92119546 92119545 92119618 73 TTCCCTCCCTGGCCCGTCCATGGCTTTCTCCTCAATGCCTTTCTTTATTTCTTTTTTTTTTTTTTTTCACTTT ..........xx.:.x.:.x.xx....:.:..:xx.x.:.......x.......:....:....:..:x.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 81468098 NA +3430 chr4 + 190214555 83578888 83578887 83578980 93 TCCCTCCCTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 35294590 35294589 35294681 58935722 58935721 58935813 92 TTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTT-TTCCTTAGTCACTGTTTTCTTCTCATTC .:....::.:.::...x:x..x......:..:....x.......x:....:..:..:...x...-..:...xx.:x..x.:..::.:..x... 64M1D28M 62/92 67.4% 92/94230402 0.0% 1/92 1.1% 48284298 NA +3148 chr4 + 190214555 83578895 83578894 83578965 71 CTCTTTCTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCT chr4 - 94230402 16390122 16390121 16390192 77840211 77840210 77840281 71 CCCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATTTTTAGTTCTGTTGTTTGTTTGTTTCT .:.:..xx......................:..:.:xx:.x.x....:xx....x..x...x...x..... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 67188773 NA +3902 chr4 + 190214555 83578897 83578896 83579049 153 CTTTCTTTTCTTTTTTCTTTTTTC--TTTTCT--TTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT------TCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 45185589 45185588 45185750 49044653 49044652 49044814 162 CTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..:x:...:.:.:..:..xx.:..--......--...x...............:x....::x:.....-..........xx:....:.:..::.:x..------.:..:x..x.:.x:...:..xx::x...:.xx.:....x:.:.:..:::..:xx..... 24M2I6M2I34M1D29M6I59M 99/152 65.1% 162/94230402 0.0% 11/152 7.2% 38393308 NA +3709 chr4 + 190214555 83578904 83578903 83579014 111 TTCTTTTTTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTT---CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 - 94230402 36600615 36600614 36600728 57629675 57629674 57629788 114 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGGTATTAATTTGCTCTCTGGTGCTTGAACACTTTCCTTCTGTCCGCCCATCCACTATTCTT .:........:.:.:.....:.:..::.....:......x........:.x.---:x..xx..:x:...:.xx.x...xxx:x.........:x...x:..x...x::x..... 52M3I59M 74/111 66.7% 114/94230402 0.0% 3/111 2.7% 46978289 NA +3348 chr4 + 190214555 83578911 83578910 83579037 127 TTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 23468147 23468146 23468273 70762130 70762129 70762256 127 TTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ..:..xx.x.:...:...:...:..:........:xx:x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx.::..x..x..:...x:.:...:x..::....:x..x....:.:.::. 127M 76/127 59.8% 127/94230402 0.0% 0/127 0.0% 60110764 NA +3156 chr4 + 190214555 83578913 83578912 83579037 125 CTTTTTTCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT-CCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTT-----TCTTTCTTTCTTT chr4 - 94230402 38776925 38776924 38777053 55453350 55453349 55453478 129 CTTTTTTTTAGCTTATTTCTCTTCCTTTTCCTTACTTATTTATCTTCCTTTTCCTCCTCTTTTCTGATTCTCTCTACCTTGCAAGCATCCT--CTACCCACTGTCCCCAGCGTCGAAGTTTTTCTCCCTTT .......:.xx::.x.:.:....:......:..x...x.:.x....:....:::..:.::.....xx:.:...:.-....x.xxx.x....--..x..:x..x....:xx.x.-----.:.....::.... 75M1I15M2D20M5I13M 81/123 65.9% 129/94230402 0.0% 8/123 6.5% 44801988 NA +3046 chr4 + 190214555 83578919 83578918 83579000 82 TCTTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTC chr4 - 94230402 83048900 83048899 83048979 11181424 11181423 11181503 80 TTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCC--CCTTC .:.x..:.........x................::.x.x..::::x::...x..:x.x:x..::...:...x...--..... 75M2D5M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 530019 NA +4305 chr4 + 190214555 83578950 83578949 83579109 160 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 45185583 45185582 45185741 49044662 49044661 49044820 159 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC---CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCT ..x..x..:x:....::....:..xx::.:xx..:.:.x....x...:...:..:...:.x.:....x.:..::..........xx:....:.---......:x...--.x:....:x..x::.x.......xx..x:..:.xx.::...x:.:::...::. 93M3D11M2I53M 98/157 62.4% 159/94230402 0.0% 5/157 3.2% 38393367 NA +3899 chr4 + 190214555 83579137 83579136 83579328 192 CCCTCCCTCCCTCTCT--CTCTTTCTCTCTTTCTCTTTCTTTCCTTTCTTAATTTTTATTTCTTTCTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCTCTCCCTCTTTTCTCCCTTTCCCTTCCCTTCCCGCCCCTCCCCTCTGTTCCCCTCCCCTCCCCTCCC-CTCCCCTCCTCTTCCCTTTCCATCTCATTTT chr4 - 94230402 76984153 76984152 76984346 17246057 17246056 17246250 194 CCCTGTCTCCCCCGCCAACATCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCC-TTCCCTCCAGCTTCCGCCCTGGCTCGTGTTTTATCTCCTAACATCTCTCACTTTCTTTCTCTTCTGCTGTTACTTCATTCT ....x:.....:.x.:--.x::.....x:...x........::.x:.xx.:.x.xx.:x..x:......::..x..x...:x:.:...:.:..::.xx.xx..:..::..:..-......:.xx:.:......:xx.:.x:xx..:x:....:xx.x:...:.-..::.:.:......:x:.x::.::.....:. 16M2I95M1D49M1I31M 111/191 58.1% 194/94230402 0.0% 4/191 2.1% 6594984 NA +3344 chr4 + 190214555 83584581 83584580 83584663 83 CTGCAACCTCTGCCCGCTGAGTTCAAGCGATTCTTATGCCTCAGCCTCTCGAGTAGCTGGAATTACAGGCATGTGCCTCCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x.:x...:.......:.x...x:.x.x........:..:...........:....--.:..::..x.::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 65387455 NA +3047 chr4 + 190214555 83604024 83604023 83604088 65 AAATAATCCTAGTTTTAATAATCCTTGTTTCAATCCAGTTTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 30132411 30132410 30132475 64097928 64097927 64097992 65 AAGTTATCTTATTTTTCTTAACAATATTTTCTATCCATTTCTTGTTTGCTTACTTGTTTGTTTTT ..:.x...:..x....xx...:xx.xx....x.....x..:.......:..::............ 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 53471613 NA +3820 chr4 + 190214555 83604147 83604146 83604229 83 CTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTATAGGCATACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.:.........:.x...x.xx.x.........:...........:.:..:.--.:.:......::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 65407021 NA +3201 chr4 + 190214555 83634603 83634602 83634676 74 CTGCAGCCTTGACCTCCCAGGTTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTAGCTAGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.::........::x.:.x.xx:x........::::.......:.:....:.x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 65437477 NA +3060 chr4 + 190214555 83643242 83643241 83643339 98 CCTTTCCTTTCCTTCCTTTCCTTCCTTTCCTTCCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTTTTC chr4 - 94230402 73089733 73089732 73089830 21140573 21140572 21140670 98 CCGTTCCTTGCAGTCTTTCCCCTTCTTCATTATTTATCATCTCTGTCCTTCAATCACTTCTTAATCCTTTCCTTTCTCCCTTACTTCTCATTCACTTC ..x......x.xx..:..:..:.:...:x:.x:::x.:x::..:x......xx..x:.:...xx.:.:......:..:....x......x:..x:... 98M 60/98 61.2% 98/94230402 0.0% 0/98 0.0% 10553509 NA +3004 chr4 + 190214555 83701291 83701290 83701371 81 GTATATTATTCTTTTTACATATTGTCGGGTTCAATTTACTTTTTTTTTTGAGATTTTCTTTGGTCTATGTTCATGAGGGAT chr4 - 94230402 41743590 41743589 41743670 52486733 52486732 52486813 81 GTATATTTCCCTTCCTACATAGTTAAAAGTTTAATTTTTTTTTTTTTTCTGGCTACTCTTTAATACATGTTTCTGAAGTAT .......x::...::......x.xxx::...:.....x:.........:x:.x.x:.....::.x:.....:x...:.x.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 41957701 NA +3091 chr4 + 190214555 83735965 83735964 83736054 90 TTCCCTTCTTACCTTCCTTTCTCTATTTTTTTTCCTCCTTCTCTCCTCCCTTTCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTT chr4 - 94230402 40100164 40100163 40100253 54130150 54130149 54130239 90 TTTATTCTTTCTCTTCATGTGTTTAAGTTATTTCTGTATCTTCTCCACCCATTTTTTTTTTCTTTTCTTTTTCTAGACTAAATCTCAGTT ..:x:.::..x:....x.x.x.:..xx..x....:x:x.::.....x...x..:.......:....:.....:x...:x:.:.....x.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 43635801 NA +3362 chr4 + 190214555 83746769 83746768 83746922 154 AGATAACATAATGATGC----CCTGGTTT--------ATTTCCAT---TTCAGTCCATTCTACAAATTGCTTTTGGTGTTCTCAGA-------------AAGAAAAAG--AAAGAAAGAAAGGGAGAAAGAAAGAGAAAGAAGAAAAGAAAGGAAACGGAAAAAAGAAGAAAAAAGAAAAAAAG chr4 - 94230402 36858196 36858195 36858377 57372026 57372025 57372207 182 AAGTAATAAAAAGATGCAACTCCTGTTTTCTAATATGATTTTCACCCCTTCAGTCAACTCAAAGAGC--CTTTTGGCTGCCTGAAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .::...:.x..x.....----....x...--------....:..:---.......x.:..x.x:.::--.......:xx:..x.:.-------------:.....x..--..x.....x........:.......:...x.:x.:xx:..:...:.x...::.x..:::x..:..:.:...... 17M4I8M8I8M3I19M2D17M13I9M2I74M 105/152 69.1% 182/94230402 0.0% 32/152 21.1% 46888573 NA +3459 chr4 + 190214555 83746823 83746822 83746882 60 CTTTTGGTGTTCTCAGAAAGAAAAAGAAAGAAAGAAAGGGAGAAAGAAAGAGAAAGAAGA chr4 - 94230402 6440194 6440193 6440253 87790150 87790149 87790209 60 CTCTTGGTGGTCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA ..:......x...:.:..........:..:...:...:....:...:.:.:::.x.:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 77306629 NA +3388 chr4 + 190214555 83746839 83746838 83746926 88 AAAGAAAAAGAAAGAAAGAAAGGGAGAAAGAAAGAGA-----AAGAAGAAAAG---------AAAG---GAAACGGAAAAAAGAAGAAAAAAGAAAAAAAGATTG chr4 - 94230402 30533164 30533163 30533268 63697135 63697134 63697239 105 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCG ...x......:..........:.::.::...:.:...-----..:...x....---------....---....::...:..x..:.......::.:....x.::. 37M5I11M9I4M3I36M 66/88 75.0% 105/94230402 0.0% 17/88 19.3% 53213675 NA +3007 chr4 + 190214555 83796957 83796956 83797005 49 ATATATATGTGTGTGTATGTGTGTGTGTGTGTATATAGATATATACACA chr4 - 94230402 33398803 33398802 33398851 60831552 60831551 60831600 49 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACA .....x....:.x.:x.x.....:...........:.x........... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 50398154 NA +10933 chr4 + 190214555 83865623 83865622 83865799 177 GCAGGCCTTACTACCAGCGAAATCCCACATGACAAATTCGTCCTTTGTGCTGATACAATTGACTTGTCACCTCATTTTTACAGCTAATTAGCTCTTTAGTAAGCAGTGGCTAGTGTCAGAGGTCATCTGATACCTGATTCCGGTAAATTGACCGTAAATATTACTGTCCATCTGTAT chr4 - 94230402 46162638 46162637 46162813 48067590 48067589 48067765 176 GCAGACCTTATTATCAGCAAAACCCAAAAAGACGAATTTATCCTTTGTGCTGATGCAATTGACTTGTCACCT-ACTTTTACAGCTAATTAGCTCTTTAGTAGATTACGCCGGATGTCAGAGGTCATCTGATAGCTGATCCTGCTAAACTGACTGTAAATATTTCTTTCCAATTGCAT ....:.....:..:....:...:..x.x.x...:....::..............:.................-.:..........................:::x::.x.x::...................x.....:.:.x....:....:.........x..x....x:..:.. 72M1D104M 142/176 80.7% 176/94230402 0.0% 1/176 0.6% 37702985 NA +3161 chr4 + 190214555 83915756 83915755 83915837 82 AAAAAAAAAACAAAAAACCTCCCACCCTGCAAACAAACAAACAAACAAACAAACAAACAAAA---CCAAACAAAAAAAAAAAACA chr4 - 94230402 52375079 52375078 52375163 41855240 41855239 41855324 85 AAAAACAAAACACAACCTCCTCTCCCCACCAAAAAAAACAACAAACAAACAAACAAAAAAAAGCCCCAAAATAAAACAGATATCA .....x......x..xx:.::.:x...xx....x...xx..................x....---.....xx....x.:.x.x.. 62M3I20M 61/82 74.4% 85/94230402 0.0% 3/82 3.7% 31540677 NA +3173 chr4 + 190214555 83929994 83929993 83930089 96 CAAAGAATTGTTTTATGTATATATACATATATATATGTATACACACACACACACACACACACACACATATACACACACACTTTATTTTGGCAATTA chr4 - 94230402 53319056 53319055 53319151 40911252 40911251 40911347 96 CAAATAATACTTTGGTGTTTATCACCATTTGTATGTGTGTAAACACACACACACAAATACATATAGATGTTCAATTGCTCTATTCTTTCAGAATTA ....x...xx...x:...x...xxx...x.:...:...:..x.............x.:...:.:.x..:.x..xx::.x..x.x:...x:x..... 96M 64/96 66.7% 96/94230402 0.0% 0/96 0.0% 30610938 NA +3115 chr4 + 190214555 83930005 83930004 83930059 55 TTTATGTATATATACATATATATATGTATACACACACACACACACACACACACAC chr4 - 94230402 14964830 14964829 14964884 79265519 79265518 79265573 55 TTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...::..:.::.:..:.:...:...:..:.xx........::............. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 68965175 NA +3025 chr4 + 190214555 83930007 83930006 83930085 79 TATGTAT----ATATACATATATATATGTATACACACACACACACACACACACACACATATACACACACACTTTATTTTGGCA chr4 - 94230402 4481681 4481680 4481763 89748640 89748639 89748722 83 TATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTA .....:.----.....x:.:.:.:.....::...x...:.....:x....:..x.xx.:...:.:::....x....:.x..:. 7M4I72M 54/79 68.4% 83/94230402 0.0% 4/79 5.1% 79448326 NA +3336 chr4 + 190214555 83930007 83930006 83930089 83 TATGTATATATACATATAT----ATATGTATACACACACACACACACACACACACACATATACACA---------------CACACTTTATTTTGGCAATTA chr4 - 94230402 8395797 8395796 8395898 85834505 85834504 85834606 102 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATA .:...::...x....:...----........:.x:...:xx.:...............:.x.....---------------..x...x:...:......x.. 19M4I43M15I21M 64/83 77.1% 102/94230402 0.0% 19/83 22.9% 75534210 NA +3044 chr4 + 190214555 83930008 83930007 83930058 51 ATGTATATATACATATATATATGTATACACACACACACACACACACACACA chr4 - 94230402 21908462 21908461 21908509 72321894 72321893 72321941 48 ATGTAGAT---CAGATATATATGTATACACACACACACACACATTAACACA .....x..---..x.............................:xx..... 8M3D40M 43/48 89.6% 48/94230402 0.0% 3/48 6.2% 62021546 NA +3058 chr4 + 190214555 83930025 83930024 83930089 65 TATATGTATACACACACACACACACACACACACACATATACACACACACTTTATTTTGGCAATTA chr4 - 94230402 79214678 79214677 79214742 15015661 15015660 15015725 65 TATAGGTTTCTATGCATATGCATACACACCCACACATATACATACATGCTTAAATTTAATAACTA ....x..x.x:.::..:.::..:......x............:...::...x.x...:::..:.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 4715347 NA +3038 chr4 + 190214555 83970484 83970483 83970535 52 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTAAAGAGATTATCATCCCTG chr4 - 94230402 13997178 13997177 13997229 80233174 80233173 80233225 52 CTTCTTTTTTTTTTTTTTTTTGCTTTTCAGGCCATAGGATTTATCAGCCCTG ...:.................x:....:x...:.x..::x......x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 69973306 NA +3122 chr4 + 190214555 83982430 83982429 83982476 47 ATATGTATATATA--TATATGTGTGTGTGTGTGCGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...:.........--....x.............:......x:....... 13M2I34M 42/47 89.4% 49/94230402 0.0% 2/47 4.3% 79576007 NA +3153 chr4 + 190214555 83982431 83982430 83982491 61 TATGTATATATATATATGTGTGTGTGTGTGCGTGTATATATATATATAAATATACATGCAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:....:x....:..:x....x.....::.:.:.......:.......x.x...:..x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 51022863 NA +3153 chr4 + 190214555 84002652 84002651 84002703 52 TCTGTGTGTGTATGTGTATACACACACACACACATATATATATATATTATAT chr4 - 94230402 64433218 64433217 64433269 29797134 29797133 29797185 52 TCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGT .........:...:.:.x......:......:....::...:...:::..:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 19569434 NA +3026 chr4 + 190214555 84029167 84029166 84029232 66 AACCTCTCTGTGCCTCAATTCCTTCATCTGTAAAATGGGGACAGTA-AAAGTACCAATCTCATAAGG chr4 - 94230402 66214158 66214157 66214224 28016179 28016178 28016245 67 AGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAG .:.........::.x.:...:..:...............:.:.:..-x:xx....x.....x..::. 46M1I20M 48/66 72.7% 67/94230402 0.0% 1/66 1.5% 17815009 NA +3031 chr4 + 190214555 84058754 84058753 84058826 73 AAAAAAAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAA chr4 - 94230402 32025570 32025569 32025642 62204761 62204760 62204833 73 AAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAA ....x.:..x...:::........::.......:....x....:.....::xxxx:.:..:.x....:x:... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 52033184 NA +3107 chr4 + 190214555 84125550 84125549 84125646 97 AAAAAAAAAAAAAAAAAAAATCAACATAATTACAAGTAGAAAAAGACAAA----------CACAAAATATTAGGAGATT--TGAGCAT----ATTTTTCTCAGAAATAAAAAA chr4 - 94230402 75936491 75936490 75936603 18293800 18293799 18293912 113 AAAAAAAAAAAAAAAAGAAATCTGCACCATTACAAAAAAAAAAAAAAAAAGACTTATTGGCATCACATTTTGGGAAGTCAGTGAGCAGGAGAAATTACTTCAGATATAGAAGA ................:.....x:..:x.......:x.:.....:.x...----------..:x.x..x..:...::.:--......x----.x..x::.....x...:..:. 50M10I19M2I7M4I21M 71/97 73.2% 113/94230402 0.0% 16/97 16.5% 8189059 NA +6276 chr4 + 190214555 84150268 84150267 84150410 143 ACAAATATTAACTTATTCCTCATAACAACTCTGTGTGGTAGGTTATCATTACTAGTTCCATTTTACAGTTGAGAAAATTGAGGAACAGAGAGGTTAAGTAGTTTATCCAAAGTC---ACACAGCGATTAGGTTAGTGTGAATGTGA chr4 - 94230402 10729150 10729149 10729294 83501109 83501108 83501253 145 ACAGGAATTGATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAATCCAGGTATGTGGGTGTGTGA ...::x...:.:...x-.....:..:.x.:.....x.......x..:.:..::..:............x..:.....:.....x...x.x..........:...::...:....---::....x:x::....xx...x.x:..... 16M1D97M3I29M 103/142 72.5% 145/94230402 0.0% 4/142 2.8% 73421118 NA +3128 chr4 + 190214555 84156014 84156013 84156082 69 TGCATTTATTTGTGTG-----------TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982602 70982601 70982681 23247722 23247721 23247801 80 TATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .::.......::...:-----------...........:........:....:.x:...x..:.:.:.::...:.:.:.. 16M11I53M 50/69 72.5% 80/94230402 0.0% 11/69 15.9% 13173412 NA +3106 chr4 + 190214555 84156018 84156017 84156082 65 TTTATTTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 19559280 19559279 19559343 74671060 74671059 74671123 64 TTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATAT ....x:.:.x.x.x.x..............................:.xx..-..x.x.:..... 52M1D12M 51/64 79.7% 64/94230402 0.0% 1/64 1.6% 64596738 NA +3036 chr4 + 190214555 84156028 84156027 84156067 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -5665254 -88565148 +3059 chr4 + 190214555 84167120 84167119 84167168 49 AAGTCTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGCATGTATGTT chr4 - 94230402 48089500 48089499 48089548 46140855 46140854 46140903 49 AAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATT ........:.:..:::........:....x.x.......:..:...:.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 36077620 NA +3080 chr4 + 190214555 84194177 84194176 84194233 57 TGTGTGTGTGTGTGTGTGTGCATGTATGTATATACACATATATACATACATATTCAT chr4 - 94230402 44746772 44746771 44746828 49483575 49483574 49483631 57 TACGCGTGCGTGTGTGTGTGCATGTATTTATAAACACATACACACTTTACTGTTTAT .::.:...:..................x....x.......:.:..x.xxx.:..:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 39447405 NA +3031 chr4 + 190214555 84217793 84217792 84217874 82 AAAAAAAAAAAAAAAAAAAAATGCACACCTAAAGAACTTTTCAAGGTTTACCCAAACTCGATTTTTTCTCTTCTTTCATCCT chr4 - 94230402 40433580 40433579 40433661 53796742 53796741 53796823 82 AAAAAAAAAAAAAAGGAAAAATGTACACCTAAGCATCTTCAAAAGAATAATCCATGCATTCTTCTTGTACTAATTTCACCTT ..............::.......:........:x.x...:xx...:x.x.:...x:.x:xx..:..x:x..xx.....:.:. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 43784213 NA +3005 chr4 + 190214555 84248151 84248150 84248221 71 TCTGAATGATGAAAAAAATATGAAAATTAACATTTACTCTCAGCTGCCAAGTGAAAAGAATGATCACTTAT chr4 - 94230402 64334546 64334545 64334616 29895787 29895786 29895857 71 TCTGAAAGATGAAATACCTATGAAACTTAACAATTTCTCTTAGATAACTTGCGAGAAGAATATTAGCTCAT ......x.......x.xx.......x......x..x....:..x.:x.xx.:..:......:x.x:..:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 19913605 NA +3065 chr4 + 190214555 84250415 84250414 84250463 49 GTCTCTATAAAATTAAAAAACAACAACAAAACAACAACAACAACAAAAC chr4 - 94230402 33097046 33097045 33097094 61133309 61133308 61133357 49 GTATCTATAAACATTAAAAACAACAATAAAATAATAATAATAACAAAAC ..x........xx.x...........:....:..:..:..:........ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 51153369 NA +3770 chr4 + 190214555 84267588 84267587 84267992 405 CAATTGCAAAGGTAAAATGAATGGTAATAAGAAATTGATTTAAGGTCTGCCCTAGGGTAAAATAATGATTCATTGACGTTTGCAGCATTTTATTGTAAGTGTGGTGGAAATGATTATTATCTTTAATGGTTAACTGAGTAATTGATTATTGATAAATGAGTACTCTATTCAAGCCAGGATCCATCTTACATCACCTGGAAAAGGATGATGTTCCTACTCTTTTAATGA-CCATTAAGTGGTAAATAAGGAAGTGGAAATGTTTCATAACTTACATATTAAGTATCTTTGGTCATTTAACCACCTC----TACAATGAG--AGCAATAAGGGAGCTGGGGGTA----GGTAACCGACA-----TAAGGAAAGATCAATGACTGTTTTTCAGAGTTTTATTGAAAGTGCATTATGGATTGTCT chr4 - 94230402 83339823 83339822 83340210 10890193 10890192 10890580 388 CAATTACAGAAATTAACCTGCTGTTAGAACGAGGTC--TTTAGAGTCCAGATCAGACTAAACCACTGATCAGACCATATTCATACCCCTTTACGGATAATGTGGAAGAGGTTGTTATGATCTTTAATGATTAATTGAGTGACTGGTTTCTGCAA----------TTGTTGGAACCACG--TCAGCCTTTACCCTCTGTACAGGA--GGTGAACTTTTCCTGCTAAAGAGCTGACAAGAAGCGAATAAAGGACAAAAGATGTT-------CTACTTTCTAA---------AACATTCAACTATGTTTTCGTACGATTAGTTATTAACATAGCTACTGGAGGTAATACAATAATTAATAATCAGTAATGAAATGAAAAACACTTGTTTGCAGAATGTAATTTGAAGTGCACTGT-GATTATCT .....:..:.::.x..x:x:x..x..:x.x..::.:--....::...::xx::..:x....x:.x....:x:x:x.::..:::.x.x:....:x.xx.:.....x:..::.x:....x..........:....:.....:.:..:..x:..xx.----------:.:..x:.:...x.--:..x.:.x:.:.x:...x.x.:.:--.:..xx.:.x::..x:...x..-.::x:...x:.::.....:.:.xx::.:.....-------:...x.x:...---------:x....:...:.:x.:----...:..x..--.x:..:.x:.xx:....:....----::...:::.:.-----...x....x:xx..xx...xx...x....:.x.x...x:.......:.:.-....:... 36M2D116M10D14M2D24M2D22M1I33M7D11M9D16M4I9M2I22M4I11M5I50M1D8M 218/372 58.6% 388/94230402 0.0% 49/372 13.2% 927765 NA +3105 chr4 + 190214555 84273789 84273788 84273864 76 ACATATATATATATGTGTGTGTATATATATATGTATATATATACACACATATGTATATATCTAATATAATGATATA chr4 - 94230402 53500342 53500341 53500417 40729986 40729985 40730061 76 ACATACGTGTGCATGTGTGAGTGCATATATATCTGCATATGTACTTTCAAATGTGTACAGTGAATGTGGTGGAATA .....::.:.::.......x..::........x.::....:...x:x..x....:..:.x:x...:.::..:x... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 30773447 NA +3326 chr4 + 190214555 84308878 84308877 84308929 52 GGAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707588 70707587 70707639 23522764 23522763 23522815 52 GAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .:....x.::....::...........................::..x.x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 13601290 NA +3114 chr4 + 190214555 84308880 84308879 84308927 48 AAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACA chr4 - 94230402 60979353 60979352 60979400 33251003 33251002 33251050 48 AAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .....x...x.....x.x........:.:...:.:............. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 23329527 NA +3012 chr4 + 190214555 84308881 84308880 84308931 51 AAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACA chr4 - 94230402 70707589 70707588 70707639 23522764 23522763 23522814 51 AAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .....x.::....::x...............:..........::..x.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 13601292 NA +4803 chr4 + 190214555 84320212 84320211 84320431 220 GGACAACATCATTTC-ATCATAAATGAGAA------------GGTCGTCCTATTGAACTGTAATCCATTCATTGATTTATGGTCCCAAGTTCCTCCAAGGATTTTCACAAATGCCTGTGATGATTCCTAGTGCTGGACTTTGCATTTGGATCTGTGATTT---AGATGACAGATGCGTGAAATCATATGTAGCCAGACAAATCCCTGGTGATAACACATTTGAGGGGGCTCAAGAA chr4 - 94230402 86463325 86463324 86463552 7766851 7766850 7767078 228 GGGCAAAATCATACCTGTCATACATGAAAATAAATTTACAATGG--GTTTCATTGTACT--AAGCAAGTCATTGGTTTATTATCTGCAGTTCCTTTAAGAAATGTCACAAATCCACAGGATGTCCTTGAGCATCACATTTTGCTTTTGGATCTTTGATTTCACAGATAAAAGA----CAAACCTACATTTACCCAGACAATTCCCAAACGACTTTACATCAGTAAAAGCCTAGAAA ..:...x.....x:.-:.....x....:..------------..--..:::....x...--..x.x.x......:.....x:..:xx.......::...:.x.x........x.x::x....x::::x..:::::x.:.....x.........x......---....:.x...----::..x::.:..x..x........x....x:::..:xx:....:x.x::::..::.::.. 15M1I14M12I2M2D13M2D99M3I10M4D59M 137/212 64.6% 228/94230402 0.0% 24/212 11.3% -2143113 -92087289 +6158 chr4 + 190214555 84320267 84320266 84320421 155 TCATTGATTTATGGTCCCAAGTTCCTCCAAGGATT----TTCACAAATGCCTGTGATGATTCCTAGTGCTGGACTTTGCATTTGGATCTGTGATTTAGATGACAGATGCGTGAAATCATATGTAGCCAGACAAATCCCTGGTGATAACACATTTGAGGG chr4 - 94230402 51436392 51436391 51436548 42793855 42793854 42794011 157 TCATTAGTTTATGGTCTTAAAGCCCTCCAGGGATTGTCACTCACAAATCCACCTAATGTTTATGAGGTCTAGATTCTGCATTTGGATCTCTAATTTAGCCAACAGACATGGAAAATCATA--TAGATAGAAAACTCCCTAGTGACTACAAAGCTGTAGG .....::.........::..:x:......:.....----:........x.x:x.:...x..x:x..xx..:..:.:.............x.:......x::.....:::.x:........--...x:...x..x.....:....:x...x.x:..x:.. 35M4I81M2D37M 108/153 70.6% 157/94230402 0.0% 6/153 3.9% 32883875 NA +7407 chr4 + 190214555 84326562 84326561 84326706 145 ATATAACCTTTATATATTGGTGAGCATTAAGATTTCCTATTCTTTGAGGCAAATATTGACCTTGACTTCACCTCGGTCAATATTTACCTCTCAGGTCAATAGATCTTGATGTTCACCTCAACAGAAGTCAATATCTACTTATTAT chr4 - 94230402 67008157 67008156 67008301 27222102 27222101 27222246 145 ATATTCACTTTGCATTACAGTGAACATTAAGGTTTATAGTTCTCTGAGGTAAATATTGACTTTGACTTTACTTCAGTCAATATTTATTTCTCCTTTCAATAAACATTGATGTTTGCCTCAAGTGAAGTCAATATCCTGTTAATGT ....xxx....::..xx::....:.......:...x:x:....:.....:..........:.......:..:..:...........::....xxx......:.:x........::......xx............:xx...x.:. 145M 107/145 73.8% 145/94230402 0.0% 0/145 0.0% 17318405 NA +11797 chr4 + 190214555 84350578 84350577 84350829 252 AAAGAATGTTCTCTTAATTTCCTATTGTTGTGTACAAGATTTAGTGCTTACCCTTTAATTTCAGTGTCAGAATGTGAACTGTAATTAATTTTCATAAAATGGAAAGCAATAAAGTCAGATATATTAAATGCTGGCTGTAGAGGTTGAAATTGTATAATTTACAATTAGGGATAGTGGGGGAAAAAACAGC------CTACACATTAA---ATGAGTGA---TAACTCATCTTGGCTTCAGCTTCAGAGATCATGAAAGTGGTCA chr4 - 94230402 46018054 46018053 46018315 48212088 48212087 48212349 262 AAGGAATGCTCTCTTAATTTCTTATTGTTGTGCATGAGATTTAGTGCAGATCCTTTAATTTAAATGTCAGAATGTGAGCAGTAATTTATTTCCATAAAATGAAAAGCAATAAAGTCAAATATATTAAGCTCTGGCTGTGAGAGCTCAGATTATACAATTTATAATT--GTTTTAAAAAAAAGAAAACAGCAAAAAACTACGCCACAAAGGATGAGTTATTGTCACTCACTTAAGCATTTGATTCAGGGCTGGTGAAAGCAGCCA ..:.....:............:..........:.::...........xx.:..........x.:.............:.x......x....:.........:...............:.........::x........::::.:.x.:...:..:......:....--.xx.x:x:::::.:........------....:.xx:..---......x.---.x.....::.x:..x.:x.x.....:.x.x:......::.:.. 166M2D22M6I11M3I8M3I43M 188/250 75.2% 262/94230402 0.0% 14/250 5.6% 38332524 NA +3407 chr4 + 190214555 84369449 84369448 84369498 50 CTTGTTTGTTCTACTAGTTTTTTTGTTTGTTTGTTTTTGTTTTTTGTTTT chr4 - 94230402 59937397 59937396 59937446 34292957 34292956 34293006 50 CTTCATTATTTTTCTGGTGTTTTTGTTTGTTTGTTTTTGTTTTTTGTTTT ...xx..:..:.x..:..x............................... 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 24432052 NA +3132 chr4 + 190214555 84378289 84378288 84378424 136 AACAGATAGCCCCAGAACAAAAGAAAAGCATACATA-GCTAGAATTCATATTCAAAA--GGCTAAAGGGAGGAAAAATATTTCTGTATCT----------AGATAAATATGCATGTGGACACACACACACACACACACACACACATACA chr4 - 94230402 78588338 78588337 78588480 15641923 15641922 15642065 143 AGCAAATATCCACGCAGTGGAATAAAAACAATCAAACACTATAAGAGCTATTCCAAACCAAGTAATAAAAAGAAAA------CCGTATTTCAAACGGGGCAGCTATATATGCCTGTGGACACAGACATAGACACACACACATACACGCA .:..:...x..x.:x.::::..x....:..xx..x.-:...x..xxxx.....x...--::x...x:::.:.....------.:....:.----------..x..x......x..........x...:.x...........:...::.. 36M1I20M2I17M6D8M10I49M 89/130 68.5% 143/94230402 0.0% 19/130 14.6% 5789951 NA +3377 chr4 + 190214555 84428977 84428976 84429047 71 TATATATATATATATACATACACAGACACACACATATATATACACATATGTGTATATATGTATATGTGTAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..::.......:.....:.:.:...:..x.x.:..::...:...x.::..:..x........:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 12798842 NA +3048 chr4 + 190214555 84428980 84428979 84429045 66 ATATATATATATACATACACAGACACACACATATATATACACATATGTGTATATATGTATATGTGT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::....:.....x.........:....x..x::x:.x.......:.xx:...:.::. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 17524133 NA +3082 chr4 + 190214555 84429090 84429089 84429169 80 TACATATATGTATGTATATATGTATATATACATATATATATACGTATATATGTATATATACATACGTATATATATATGTA chr4 - 94230402 17853465 17853464 17853544 76376859 76376858 76376938 80 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCA ..:x.:.x.:....:.:.........:.:.x:..xx.x.:..:.:...:......x.x.:....:...x.x.x:....:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 66575625 NA +3247 chr4 + 190214555 84437255 84437254 84437321 67 TGTTTATTTGAAATTCAGATTTAACTGAGTGTCCTGGGGTTTTGTTTGTTTGCTTGTTTTTTTTTTT chr4 - 94230402 84354798 84354797 84354864 9875539 9875538 9875605 67 TGTATATCTTGATTTTATTTTTAAAAGGGTTTTTTGGGGTTTTTTTTGTTTGTTTGTTTTTGTTTTT ...x...:.x:.x..:.xx.....xx.:..x.::.........x........:........x..... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 82457 NA +3843 chr4 + 190214555 84440697 84440696 84440803 107 TCAGCATTTCCATTATAAAACCTGATTTTCAGGGATTTATAACTAAAC--TGAAGATTTCCTTCAGAGTGAGGCAAGAATCACCAGGTCTCAGCTCAGAGCACAATTTT chr4 - 94230402 60686086 60686085 60686194 33544209 33544208 33544317 109 TCAGCATTTCCATTATAAAACCATATTTTAGGGGGTTTATAACTCAACCATAAAAGCTCACTCTATGCTGAAACTTGGCACATGAAATCCCAACCTGGAACAGATTTTT ......................xx.....x:...:.........x...--.:..:::.:x..::.x:x...::.xx.:xx..:x.::..:..:.:::..:..x.x.... 48M2I59M 71/107 66.4% 109/94230402 0.0% 2/107 1.9% 23754611 NA +3368 chr4 + 190214555 84493501 84493500 84493551 51 CGGCAGCGTGCTTCTTCCTCCACTTGGTCCGGCGGTTCTGGAACCAGACCT chr4 - 94230402 6788561 6788560 6788611 87441792 87441791 87441842 51 CGCCCGGGTTCTGCTTCTTCCACTTGGTGCGGCGGTTCTGGAACCAGATCT ..x.x.x..x..x....:..........x...................:.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 77704940 NA +3307 chr4 + 190214555 84579979 84579978 84580047 69 GCCTCGAACTCCCAGGCCCAAGCAATCCACCCGCCTCAGCTTTCCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197131 18197130 18197199 76033204 76033203 76033272 69 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...:x:.:..:.::..::....::x.:...xx.x......:..:...........:......x.::... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 66382848 NA +3118 chr4 + 190214555 84598117 84598116 84598173 57 CTCCATCTCCAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAACCA---------TGAAGAAACAGA chr4 - 94230402 64294991 64294990 64295056 29935347 29935346 29935412 66 CTCCATTTGTAAAAAAAAAAAAAAAGCAAAAGAGAAAGCAAACTAAAACTACTCTGAAAAAGCAAA ......:.x:................x......:....x....:.---------....:..:..:. 45M9I12M 47/57 82.5% 66/94230402 0.0% 9/57 15.8% 20303126 NA +3335 chr4 + 190214555 84609176 84609175 84609243 68 GTCTCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAATTATTTTCTTTCTTGGCTAACATAACTTTAA chr4 - 94230402 32185035 32185034 32185102 62045301 62045300 62045368 68 GTGTTCAAATGAAAAAAAAAAAAAAAGAAAGATAAAAACATTTTTTCCTTTGGCGTACACAAATTTAA ..x.:x...x:...................::x....x:.....:.:::.....xx...:..x..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 52424141 NA +3193 chr4 + 190214555 84609178 84609177 84609336 159 CTCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAATTATTTTCTTTCTTGGCTAACATAACTTTAAAAGTTAATTTATCTCCCAGT-------GTGTGAATGAATGCTGTTTGTTTTTT----GTTTTTGTTGTTTGTTATATAAAGTGA------AGTAGTAGAATCTTATAGTT chr4 - 94230402 65615211 65615210 65615382 28615021 28615020 28615192 172 CTTAAAAAAAAAAAAAAAGAAAGGGAAAAGAAATATTGATTTCTAATTTGATTAGAGTA----TAAGATTTACAGTTTCCTCCATTCAAGTTAATGTTAACTAAAGCCATTCCCTATCTATCAGTTATTGCATTTGGTGATAATGCGTGAATGCATAGTGATATATTTTCATTGTT ..:...............:...::.........x...:x.....xx:...::..:x:..----...:.x...xxx.x..::...x.-------:...x..:x..x..::..:x:.x.:.----...x...:xx..x..x...xx:x....------...::..x.x.:.:..x... 59M4D23M7I26M4I27M6I20M 102/155 65.8% 172/94230402 0.0% 21/155 13.5% 18993967 NA +3616 chr4 + 190214555 84615466 84615465 84615621 156 ACCCCCACCTTTGTCTTCCAGCAACTCCA-------CCCTCCTAGTAGTTCCCTTAATACGCCCCATTCCCTCTACAGGTGGTGACTCTGCAGATCCTCCTCCTCTGGCTCTGCCGTTGCCCACCCCCTCCCCCTGCCACAGGTGTGTCTGCCTCTACACACG chr4 - 94230402 93311766 93311765 93311919 918484 918483 918637 154 ACCCCCTGCGCTTCCTTCCTCCATCCCCAGGCCGTGCCTTCCT-------CCCTTGCAGCTCCCCATTCCCTCCCCCTTTGCTGCCATTCCCAAGCCTCCTCCTCTCGCCCTGCCGCTGTTCCCACACTCCCC--AGCACCTCCGTGTCCCCCCATGCTCACG ......xx.x:.x:.....xx..x.:...-------..:....-------.....:xx:.x............:x.xxx..x..x.x:.x.x:.x...........x..:......:..::.x.x.x......--:x...xxx:.....:x..:x.:.x.... 29M7I7M7D83M2D28M 98/147 66.7% 154/94230402 0.0% 16/147 10.9% -8696300 -85534102 +4381 chr4 + 190214555 84628608 84628607 84628678 71 CTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCAGCCTCAGCCTTTCAAGTAGCTGGGACTGCAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.....:x..:..:.....:.......x.:.x.x:.x.....................:...:..x... 71M 56/71 78.9% 71/94230402 0.0% 0/71 0.0% 66431482 NA +51268 chr4 + 190214555 84669547 84669546 84670532 986 TTTTGGTGGTAAATAG---GTATTTATTTGAAATGAAAAAAAAATTACTTAAGTACCTGGACTATTGCATTTAATCATGTATTGTAATTGTGTTACTCTACCTTTTTGCATCAGAGACAAATATACAATGAACATTCAGATATCACAGACTGCACACTAGATAGTAATTCTTCAGGTCTTTTACATAACCACCAAGAAACAGATATTGGTTTCTGCAATATAGTATAAAAGTCCACAATCAATCCAGTCTTAGCCAG-TATCTTCAATTTACTTCTGTTGCTGTACAAATAATTGGCCATT--ACTAGGGCTTACAAGTTAATAACAGGAC--AAAAAATATACATTGCACTGACACAAAAAGTCAGCTGTGTTAAGAGTCATGCAACAAGTAACCAAACTTGCTGAAATTAAAAATACTTTCTAAAAACAGTTTTAACGGCATAAATATTTTATACACAGTTCATTTACCAAAACAAAAT--GTATTTAAATGATACAAAGCAAAAATAAGTTTCTACCAACTTTATACATAAGAAAGTGCAAAATAACTTATCTAGAGTGTTTTGCTATTATCCAGACGGATGGCTGCTATGGGCAGCTATTCTCTTCTTCAAAAGCATGACATTAGAGTTGCACACTACATAGAAATGTT-AGAATACATGGATGAACAAATGAACAGGTGGATGGATGAATGAACAAACTACAAAGATC-AGGCAGG---AGCCCTATGAGGTACTCTCAGAAAAAGAATGCAGACCATACTAAGGTAGATGTACATGTTGACAATAGATGTTGGTAAA---TAAATTTACATGGAACACAGAAAGATATCCAGAGAAATAATTAGTTTATGTATGTGAGTGTACTTGTATGTGTGAGTGATTCTGTTGATTTCTGCATTAGAGGCAAAAAGAAAAGAAA----CCCGATTGAACAAAACAGTTGCCCACAGCACCAGCTGCCAGAGGAAATACTACCATGAGGGTTT--TGGTTTCCACCTTCTA chr4 - 94230402 45787918 45787917 45788818 48441585 48441584 48442485 901 TTTTGGTGGTAAATAGCAGGTATTTATTTGAAATGAAAAAAA---TACTTAAGTACCTGAACTATTGCATTTAATCATGTATTGTAACTGTGTTACTCTAACTTTTTGCATTGGAGACAAATATACAATGAACATTCAGATATCACAGATTGCACACTAGATAGTAAATCGTCAGGCCTTTTACGTAACCACCAAAAAACAGATATTGGATTCTGCAATATAGTACAAAATTCCA----CACTCCAGTCTTAGCCAGTTATCTTCAATTGACTCCCAATGCTGTACAAATAAATGGCCATTTAACTAGGGCTTACAAGTTAATAACAGGACAAAAAAAATATACATTGCACTGACACAAAAAGTCAGCTGTGTTAATAGTCATGCAACAAGTAACCAAACTTGCTGAAATTAAAAATACTGTCTAAAAACAGTTTCAACTGCATAAATATTTTATACACAGTTCATTTACCGAAACGAAAGGAGTCTTTAAATGATACAAAGCAAATATAAGTATCTACCAATTTTATACATAAGAAAGTGCAAAATAACTTATCTAAAGTGTTCTGCTATTGAACTGATGACTGTGGGCTGGAGGCAGCCAGCCCCCTC-TCATAAGCATGACATTACAGTTGCACACTACATACGAATGTTAAGAGTAC----------------------------ATGAATAAGTATACTACAAAGAACAAGGCAGGAGAAGACATGTGAGGTACTTGCAG----AGAATACAGTC--TACTGATGTTAGTGTACATG-----AGCATATTTTTGCGCAACCCATTTTTACGTGGAAAACAAA--------------------------------------------------------------GCAAGTCTTTGCATTAGAAGCTTGAATGAAAAAGCCACTCCCCAGTGAACGAAGCAGTTGCCCACAGCACCAGCTGCCAGAGGAAATACGAGCAGGCGGGGTTCATCCCCTCCACCTCCTA ................---.......................---..............:...........................:............x..........::....................................:.................x..x.....:.......:..........:.............x...............:....x....----..x...............-...........x...:.::x..............x........--............................--...........................................x...........................................x..............:...x...............................:....:...x--..x....................x......x........:..................................:......:.......:xx.x..:.:x..xxx...:x:......:.x:.:.:..-...x.............x................x:......-...:...----------------------------......:.::.x..........x.-.......---..x.x.:.........:x...----.....:...x.--....:.x..x::........-----.::.x..x..x.::x.---:.xx.....:.....x...:.--------------------------------------------------------------.:x::.:.:.........:..xx:..x:...:.:x----...x.x.....:..:...................................x.x..x.x...x..--.xx::.......:... 16M3I23M3D190M4D18M1I43M2I28M2I148M2I127M1D42M1I7M28D24M1I7M3I21M4D11M2D20M5D16M3I21M62D35M4I64M2I16M 760/877 86.7% 901/94230402 0.0% 133/877 15.2% 38881629 NA +30718 chr4 + 190214555 84671447 84671446 84673043 1597 TGAAAATGTTAAAATCTAGATTAATTGTTTCATTTTTAATATATATTATATATATATATATATGTACATAACACACATTTAAAAAAATCCCACCACCAAGCCTTTTCTCTGTAAACTAATCTCTTAGCCCCTTCCA-------GCTTTAATCCCCCTGGATTTGTGTGTT----CTGTATCCAACTAGTAGAACAAATTAAATAACTAAATATTAAAA---TACTGTAATTATATTCATAGCAAAAACAAAAAAATAGACATTGATACAGTATAAATCT--CACTGTTTTCAGGTAGATGACATTAAATGGTAAAGGTTAA------TTTTAAGCAGTTCTGACATGA---------------TTCAG-----------TTTTACAACAAAGTTTATATGTTAATTCTGTACACTTCTTTCTTTCCTTTTTTTACCCCTTGTTTGAAAATAAGCTATAGTAGAACATTAGTGTCACCAAAGACACATACTTATTATGTTCTATGCAAGATAAGCTAATTTTGGGT-TACATGCAAATATATTTCCATTAGTTGAGACAGGG------CTGTTTCCTGCACTACACTGGTCATCTGACCACCTTTCTGCAATGCTAAGAAGGTATTCTTTGACCAAACAGCAGTCCACATACAAGTTTAAAAGGGGCCCTGTTTATGTAGGAACAACACTGAGGTGGTGCGTAGCCA-GGTACAAGACGC--CCAAA----------TATTTCCAGTTTATCTTACGGCTGGACT--------------CCTATTCTCCCACACTGTTTCCT-------AAAGAAGGTCCACATTATTTTGGTTACTAGCCTAGTTTAAGTGGAGATACTGTGGGCAACTTGAAAGAAATGACATCAGGCACACAGGCTGAGCTTGAAAGGAAAAAAAGACCACAGATAATGTCTTTGGGG-------------------------ATTTAAAAAAACATATTTATAATTAATTGGTAAGTGAGG--GATGTCAGACAAACCATAAGTAGTTCATTGAGTTAGTGGTTTAGTTTGAAGTTTCATGTTACAGGCAGTTAAGTCCTTATTTAGAAAAAAGGCCTTTTATATCTATTTACAATATACATAGTTACTTGCAAAGAAGTCAGATTTACAACCATTTTCT-AAAAGCCTTTTTTGTTGTTGGTTTTTCCA---AATAAGGATGAGTAGCTCTATAAAAATGAGATGCAAGAAAAGAGAGTTA--ATAAGTGAGGATTTTTCTCTTGGAGACAGCTACTGTCATCAGGGAGAACTGGAGGTCGAAAGTGTTGCT---------CCTAGGAACCACCTCATATTCTTCTTG-----TGCTGTTCACCTGAATCG--CGTCTGCCCCATTCCTGTACTCTACACCCGT-----TTTATTCAATGATCCCTTTGAATTTTAACACTTCAAACACGTGGTATGAAGAGATGTGTAAACGGAGACTGTTTTCAATGCCTTCCAAGCTGGGACAGGAGAAT--------------------CGGGAAGGGGTCTACAGACCATGGTCTCCACTCAGCTTGTTGAATCTTCAACAATTTCGAGGCCCATCTTCTGAACCTCTCTCATGCTGTAAGTTATAATAACAGTTCTGACAAACACGCACCGGGGATGAGATTTTCAAGCGTTTGATTTCAGATTGAAAGCGACTGCACCTAAAGGAAAGGAAAAGTCAAT-TAATTATAGGTCTTCTCCATGCTTGATCAT chr4 - 94230402 45790003 45790002 45791631 48438772 48438771 48440400 1629 TGAACATACCTAGATCTAGATCGGTT-TGTCAC-----ACGTTTACAAAATATATACACACATATTTAAAACAAACA-----AACAAACCCACTGTCAAAACCTCCTTCGGAAAGC-AGTCCACGGGCCTGTGTGGTGCGTGTGTTCCAATCCCAGTGGATGTCCATGTCTCTACTTCATCCCACATGTAGTGCAAAAGAAGTAACAGAGTAGTAAAAAAATACTGCAATTCAATTCATTTTAAAACTTAAAAA--------TGGTA--ATGGAAATCTACCACTGTCCTCAGGGTCATGCCATTTGCTGACACACGGAGACAGCTCTTAAAAGCATCTCTGGCAGAACAAGCACTAACCCGTTCCAGAGCGACTACGTTGTTCCAAACAtttttatttctttttttttttttaatttttattggttttttttttttcttttttGCAAATAAGCTACGGGACAACAGTGGTA----------------------AAATTCTATGCACAGGAAATTCATTCTGTACCTGTATGCAAGCCAATTGCTATTGACTTAAAGAAGGTAAAAGCTGGTTCTTGCACTGCATGAATCAGCTGCTAATG-------AACACTAAGGAA-------TTAACAAAACTGCAGCTCTGACATATGTATAAAACAGGCCTTGTTAA-ATATGAACAACACTGAGGTGGTAAATAGTTTTGGTATAAAATGCAACCAAAGTTTACAATTTAGTTCCTGGTTATCTTACAGCTAGAATAAAATACTCCAAGTCCTATTCTCAAAAAAAGTTTTCTTTTGAAAAAAAAAAACCCATGT-AGTTCCATGAATAGCCTTATTTAAATTAAGATACTGTGGGCAACT-GAAAGAACGAAC-----GTGCACAGACTGGATTTTTAACAGAAA------TACACATAATGCCTTTGAGTTTTCTGTTGCTTTGTTGTTGTTGTTATTTAAACATTCATATTTA-----AGTTGATAGATGAGAAAGATGCCACACGAAGTATA-----------------GTGGTT-AATCTGAAGTCCCATGTAACAGGCAGTTAGGTTCATATTTAGATAAAAAGGCCATTATACCTATTTACAATATACACAGTTGCTTGCGAAGAAGGCAGATTTACAACTATCTTCTAAAAAGCCTTCCCTTCCCTCCCACCCCCCACCCAGTACAGATGACTAGCTCTACAAAAACAAGA--CAAGAACTGGTGTTTAGGATAAGTGAGGATTTTCTTC------ATAGCCA-TGTCAACAGAG----TCAGGGGTTGACAGTTCTACTGTATCTGTGGTTATTAACCAT------GTCTTCCTGGGCCTTGCTCTTCACTCCAATGTGCCGTTCACCTCA-TCACACACCTTCCATCAACACAAATCAATTCAATGATCCCTTATACTTTCAGTGCTTAAAATAC--AGTATAAACTTAAGTGTAAACAGACAATATTCT-ACTCCCTTCTGATC----GCAGCACAATGCTCACGTTAGTTCTCAGGGTGACAGCGGGACTGTA---CAGGGTCTCCATTTACC-----ACCACCTCGTCAATTCCTGGGCCCTTCCTCTAAGCCCCGCTCGTGCTGCAAGTTGTAGAAACAGTTCTGGCAGACTCTGACCGGTGATGAAATCTTCAGACGCTTGATTTCAGACTGAAACCGGCTGCACCTGCAG--AGGAAAACACCACTGTGAAGACGTGTTCTCTCCCAGCCTCACCAT ....x..:::x.:........:::..-.x...:-----.::.x..:x.x.......:.:.:..:.x:.x....x...-----..x..x.....:::...:x.:.:::..x.x..:.-.:..:x:x:...:x.x:x:-------.:.::......xx.....x.x::...:----..x:....x..xx....x:....xx..:....x:.:..x.....---.....:....xx......xx:....x:x.....--------..:..--:.:x......--......::.....xxx...x....x:x..::.x.x.xx:.------..xx.....x:....:..x:.---------------.:...-----------.x..x...xx.xx.....x.x..xx..:.x.x:xxx.:...x..xx:.......x:::...x....x..........::.x.x....x.:..:----------------------.x:.........x::x..::.x...:..x::-.::......::xx...x.:...:::.x.:.x.:..------...x...:......:..:x::...x...x:x.:x-------..::.....:.:-------..:..x....x....::.xx.:.:.x..x.....x:....:....x.-:..x..................:x:...::x-....:..:.:..--.....----------..x....x.x.........:...:..x.--------------.........xx.x.xx....:..-------...:..:::...::.-.x..:x:.x.x......x:.....:.x:.................-.......xx:..-----.::.....:...:::..xx..x::...------:...x......:.....:.x-------------------------.......x.xx........-----.:...:..::....:--....:..x..:..x:...-----------------......-.:.:......::.....x...........:..:.x........x....:.x.:x.....:................:....:.....:......x............:..:....-.........:::.x::x.:xxx::::...---.:..x:.....x........:.....::...--......xx.:x:x...--...............::..------.:...:.-.....x...:.----:::.:...:..x...x:.:..---------x:..xx.....:------x.....:..-----....x.....::x...xx--...:::..:..-..x:::..::.x..:.x::-----.:x...............xx.x...:.:::...x...:..--:....:..xxx.x........:..x.x.:..:.-.x.x.....::.x.----:...x.x...--------------------:.:x.:x...x..::.---..x........:.:.x.-----:xxx.:..:x.....:.x:.....x..:...:.:..:.x...:.....:.....:..:x..........:..:..x.xx.....x.....:..:....::..:...........:.....x..:........:x..--.:.:...x::..x.-.:.xx.::x..::.....xx..:.x.:... 26M1D6M5D39M5D34M1D19M7I27M4I44M3I33M8D5M2D10M2I40M6I21M15I5M11I93M22D31M1I35M6I34M7D12M7D47M1D31M1I12M2I5M10I28M14I23M7I15M1D45M1D12M5D27M6D20M25I19M5D15M2I18M17D6M1D115M1I29M3I31M2D16M2I19M6D7M1D11M4D21M9I12M6D9M5I18M2I11M1D19M5I40M2D33M1D14M4D10M20I16M3D17M5D136M2D14M1I30M 997/1465 68.1% 1629/94230402 0.0% 296/1465 20.2% 38881444 NA +15110 chr4 + 190214555 84677173 84677172 84677415 243 TTCAAAAAGCAGATATCTTATCTTACTTCTGGCAGAAGAGCTGACCACAGTTCCTGCAATGGTGTCGTCTTTCTGTGAGTGAAAACCTCACCGAGCAGCCTGAGCAGCTGTCACCACCTTCATCCTTCACCCAGTGATCAGCAGCAGAACGGCCTGGCTGGTCACTCACAGACCAGCTGAAAACTCGGCCTCGACTGTCACCAACGAGGATCCTACTGTGATCCCTGCAGGAGACACGACAGA chr4 - 94230402 45792013 45792012 45792253 48438150 48438149 48438390 241 TCCAAGAGGCTGCTGC--TAGCTTACTTCTGGCAGAAGAGCTGCCCACAGTTCCTGCAGTGGTGACGCCTCTCCGTGAGCGAGAACCGGACTGCGCAGCCTGAGCAGCTGTCCCCTCCCTCATCCTTCACCCAGTGGTCGGCTGCCGACCGGCCCGGCTGATCACTCACAGACCAGCTGAACACTCGGCCACGGCCATCCCCAATGAGAATTCTGCTGTGATCCCTGGAGGAAAAAAAGCAAA .:...:.:..x.x.::--..x......................x..............:.....x..:..:..:.....:..:....xx..:.x..................x..x..:.................:..:..x..x..x.....:.....:....................x........x..:.::..x....:...:..:..:............x....:.x.x::..:. 16M2D225M 194/241 80.5% 241/94230402 0.0% 2/241 0.8% 38885160 NA +8651 chr4 + 190214555 84678162 84678161 84678293 132 ACTTACTTGGAGATGCCCAAGGCAGTGACCTCAGCTGGGTGTGCATTGTCCTTTCGATCAAAGGCTGTGTGCATAGTCAGCTTACTCCTGAACACCAGCTGCCGTTCCCATCGGTACCCTGGAATGGAGAAG chr4 - 94230402 45792455 45792454 45792586 48437817 48437816 48437948 132 ACTCACTTGGAGATGCCGAGGGCAGTGATTTCTGCTGGATGTGCGTTATCTTTGCGGTCAAATGCTGTGTGCATAGTTAGTTTGCTCCTAAACACCAACTGACGCTCCCATCGGTATCCTAGGAGGGTGCAG ...:.............x.:........::..x.....:.....:..:..:..x..:.....x..............:..:..:.....:.......:...x..:...........:...:.:.x..x.x.. 132M 106/132 80.3% 132/94230402 0.0% 0/132 0.0% 38885707 NA +15664 chr4 + 190214555 84678915 84678914 84679248 334 TTACCAGGTTTCAATCTGCTGTAATTCCGCACCTCAATGGGATTGGGGTGGGGGTGGCTAAGGGGGCCCTGCAGATGGGCTCTGGTCTGGCCCTCTGAATAGTTCACAAATATGAAGCCGTCTTTCTCATCTAGACTGAGCTGGTCGGACCAGCGTCTGGAGTCGTCAGAGCCACTGTCAGTACACCAGGCGGCTGTTGCGCGGCAGGAGGCTGCCCGGGGCCTGTGGCTGGTGCTGCTGGGTTGGCTTGGAGTGTCC------TTAGGGTCCTGGCTGATGCTCTGCTCATCTGCTTCTGAATCACTGCTGTCCTCGTCTTGGGCTTCCTGCCCTGGGT chr4 - 94230402 45793622 45793621 45793961 48436442 48436441 48436781 340 TTACCTGGTTTAAGCTTGCTGTAGTGCCGTGCTTCAGCACAGCTAGGGTGCAGGTGGTTAACCTGAGCGTGGGGATGTATTTTTGCTTGTCCTTCAGAATAATTCACAAAGATAAAGCCATCTTTCTCATCCAAGCTGAGCTGGTCTGACCAACGCCTGGAGTCATCCGAGCCGCTGTCTGCTGACCATGCCGCTGCCACTCTGTTTGAGGCTGACCTCGGTCTGTGGCTGGTGCTGCCTGGCTGACTTTGGCTCTCCTGCAGTTTTGCATCCTGGCCAATGCATGGATCATCTGCGTCAGAGTCACTGCTGTCTTCTTCATGGGCTTCCTGTCCTGGAT .....x.....x.:::.......:.x...::.:...:::x:::.:.....x:.....:...xxx.:x.x..x:....x::.:.x.::..x..:..x.....:........x..:.....:...........:.::...........x.....:..:........:..x.....:.....x.:xx....x..x....:::.x.x.:xx.......x..xx..:................:x..:..:...x.:x.x...------..x.x:.......::....x:x.x........x..x..:...........:..x..x...........:.....:. 258M6I76M 239/334 71.6% 340/94230402 0.0% 6/334 1.8% 38885293 NA +3149 chr4 + 190214555 84679830 84679829 84679895 66 ATATATATATATACACACACACACACACACACACACGTACGTGTGTATATATATATATATATGTAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..........:...........:.:x..x..x::x:.:....:.xx:...:.:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 17774983 NA +3023 chr4 + 190214555 84679833 84679832 84679885 53 TATATATATACACACACACACACACACACACACGTACGTGTGTATATATATAT chr4 - 94230402 87372741 87372740 87372793 6857610 6857609 6857662 53 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x:.x...........x.........:x::.....:....::....... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -2692908 -91537494 +3018 chr4 + 190214555 84679834 84679833 84679899 66 ATATATATACACACACACACACACACACACACGTACGTGTGTATATATATATATATATGTATGTAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::.........:..........:..:x.:x..x:.x:.:....:.xx::..:.:.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 17774987 NA +3484 chr4 + 190214555 84680365 84680364 84680437 73 CTGCAGCCTCAACCTCCTGAGCCCAGGGAATCTGCCCGCCTCAGCCTTCTGAGTAGCTGGGACCACACGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x..x..:...:.::..:.x:x.:::.xx.x.........:::.........:..:......... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 66483239 NA +6987 chr4 + 190214555 84682371 84682370 84682475 105 TACCTATTTGTGCTTCTGGACAGTCTTCCTGCATTTCTAGGACTTCAGCAGGCTCAGGAGCTGGTGTTTCAGGAACTTGCAAAAATTCCATTCTCCAAAACTAAA chr4 - 94230402 45794948 45794947 45795052 48435351 48435350 48435455 105 TACCTATTTGTGCTTCCTGGCAATCCTCTTGCATTTCCAGCACCTCCGCAGGCTCTGGAGCTGGTGTTTCTGGTACTTGCAAAAACTCCATCCGCCAGAACTGGA ................:x.:..:..:..:........:..x..:..x........x..............x..x...........:.....:.x...:....::. 105M 86/105 81.9% 105/94230402 0.0% 0/105 0.0% 38887423 NA +12864 chr4 + 190214555 84683937 84683936 84684150 214 ACTTACCCGAACCACTCCATCTGAGTGTCCTGTCACTATGACGTTCTGCGTGTCCCATTCGTTCATCTCCGACATGCAGCAGCAGATGATCTGCTGGCTCCTACCTGTGAACGTGTTGACACTCACGATAGGGTTCCCATTGATGCTCCACACATGGATATATGTGCCAGCGCAGGACACAATGTCCCCCTGAGAAGAGAGAGAAAAACGTCAT chr4 - 94230402 45795650 45795649 45795863 48434540 48434539 48434753 214 ACGTACCCGTACAACTCCATCTGAATGTCCTGTCACGATGACATTCTGGGTATCCCACTCATTCATCTCCGACACAAAGCAACACATGATTTGCTGGCTTCGACCAGTGAAAGTGTTCACGCTTGCAGTGGGGCTGCCATTAATACTCCATACATGAATGTAAGTGCCAGCACATGATACAATATCCCCCTGAAAACAGAAGCAACAACTCCAT ..x......x..x...........:...........x.....:.....x..:.....:..:.............::x....:..x.....:........:.x...x.....x.....x..:..::.::.:...:.x.....:..:.....:.....:..:..x........:..x..:.....:.........:..x...::x..x...x:... 214M 167/214 78.0% 214/94230402 0.0% 0/214 0.0% 38888287 NA +12304 chr4 + 190214555 84688076 84688075 84688289 214 TACTACTTACTGTTAATTCATTGATACAAAGAGCAGAAACTGGAGCTCGATGCCCTCGAAGCTGGGTTAGAAATGACAGTTTGTTCAAATCCCAAATGATACAGGTTCGATCACGGGACCCACTGACAATTATGTGATAGGCTAATGATGCTGTGGCGCAGGTGACGGTATCAGTGTGGCCCAGTAAGGCCTACGAATGAGAACAAACAAACAA chr4 - 94230402 45797226 45797225 45797439 48432964 48432963 48433177 214 TGCTTCTTACCGTTAATTCATTTATACAGAGTGCTGAAACTGGAGCCCTGTGACCTCGAAGCTGTGTAAGAAATGAGAGCTTATTCAAATCCCAGATGATGCAGGTGCGATCCCGTGAGCCACTCACGATGATGTGATAAGCTAGTGATGCTGTTAAGCATGTGACAGTGTCAGTATGACCCAGTAATGCCTGCAAAACAAAAGACAGAAGGAA .:..x.....:...........x.....:..x..x...........:.x:..x...........x..x........x..:..:...........:.....:.....x.....x..x..x.....x..:..x........:....:.........x:x...x.....:..:.....:..:........x....:.:..xx.:..x.x.x..:x.. 214M 168/214 78.5% 214/94230402 0.0% 0/214 0.0% 38890850 NA +11574 chr4 + 190214555 84690474 84690473 84690681 208 TCCTTCTTGGCATTTTCTATGTTCTCTCTTACCTGTTTGAGGGTGACGGTCTTGGCCTTTTCTTTGGAGGTGCCCATCTCCCACACACACACAACCGTGCTTGTTCCACCCGTGATGACCAGCTTGGGGTTGGGGCAGATTGCACAGAGAATCTGGCCCCACTCAGACAAGCATTCATAAACAGTCATGGCCT----ATAAAGTAAAACGGA chr4 - 94230402 45798847 45798846 45799054 48431349 48431348 48431556 208 TCTTAATTGACATCTT---TGCTGTATTTTACCTGTTTCAGCGTGAGAGCTTTAGCTTTTTCTTTGGAGATGCCCATTTCCCATACACACACCGCTGTGCTTGTTCCCCCAGTGATAACCAGCTTGGGGTTGGGACAAATGGCACACAGTATCTGACCCCATTCTGACAAACATTCATAAACAATTACTGCCTGGAAATAAAG-AAAACAGA ..:.xx...:...:..---..:.x.x.:..........x..x....x:.::..:..:............:.......:.....:........x:.:...........x..x.....:.................:..:..x.....x..x.....:.....:..x.....:............:.:.:x....----......-.....:.. 16M3D174M4I6M1D8M 164/204 80.4% 208/94230402 0.0% 8/204 3.9% 38891627 NA +12813 chr4 + 190214555 84691626 84691625 84691800 175 CAAACCTTGTCTGACTCATAGGTTCCCAGTCTGCAACTGAGGTCTGCATAGCCCCAAGCAAAAGTTTTATTCCAGGTTGGTGGGATAAGAACCTTATTCTGTTCCACCGCAAGAATACCTTTATCTGTACATACGATTTGTCCTACAGGTTCTTTGAGTTCTAGAAAAAAGAAAT chr4 - 94230402 45799480 45799479 45799654 48430749 48430748 48430923 175 CAAACCTTGTCCGACTCATAGGTACCCAGTCTACAGCTGAGGTCTGCGTAGCCCCAGGCAAAAGTTTTATTCCATGTAGGTGGGATGAGAACCTTATTCTGTTCAACTGCTAGAATGCCTTTATCGGTGCACACAATCTGTCCCACAGGCTCCTTGAGCTCTAAAAAAAGAAGAT ...........:...........x........:..:...........:........:.................x..x........:.................x..:..x.....:........x..:..:..:..:.....:.....:..:.....:....:.....::.:.. 175M 149/175 85.1% 175/94230402 0.0% 0/175 0.0% 38892146 NA +9161 chr4 + 190214555 84692879 84692878 84693039 161 TTTTACCTTTTACAGGTGTTAGAGAAGGCCTCAAGTTGTCTAGATGATGAAAAAAGATCTTGTCACTTGTAGATCCTGGTAGGACAGAGATTCCTGCATTGTCTCCATTGAGTCGACTTCTCACTCGCTTTGGTGGATGAGGTTTTTTAAATAACTGGTAT chr4 - 94230402 45800603 45800602 45800763 48429640 48429639 48429800 161 TTTTACCTTTCACTGGTGCAAGAGATGGCCGCAGGTTGTCCAAATGATGGAAAAAAATCTTGTCGCTTGTGGAGCCGGGGGGCACAGAGGTTCCTGCAGCCTCCCCATTCAGTCGGCTTCGAACGCGCTTTGGAGGGTGGGGCTTTTTGAAGAGCTGAAAT ..........:..x....:x.....x....x..:......:.:......:.....:........:.....:..x..x..x:.x......:........x:x..:.....x.....:....xx..x........x..:..:..:.....:..x.:...:x.. 161M 124/161 77.0% 161/94230402 0.0% 0/161 0.0% 38892276 NA +16148 chr4 + 190214555 84695967 84695966 84696230 264 TACCTGTTTAGGGATCTGACCGAAGTTATTAATGAACCCAATTGTGGCTGTCTCCTTTAGTGGGTCATTGATGTTGTAGATATCCACTTGACCCTCATAAAAAAGATGATGGAAGACATTTACAGCTTCTACTGCAGCAGGGCCTTGCTGTTTATAACCGAAGATTAAGTCAATCCACTCATGTAGATGGGCACTCACGTAATCACACTCCAAAGCCTGTAATTTCAAACATAGGT----------------TTAGTCACTGGCTGACTTCTATTACTTG chr4 - 94230402 45801756 45801755 45802034 48428369 48428368 48428647 279 TACCTGCTTTGGTATCTGCCCAAAGTTGTTAATGAATCCTATAGTTGCTGTCTCTTTTAATGGATCATTGATGTTATATATATCCACTTGCCCCTCATAGAAGAGATGGTGAAAGACATTTACAGCTTCTACTGCAGCAGGACCTTGTTGTTTATAGCCGAAGATCAAATCAATCCACTCATGCAGATGTGCACTCACAAAGTCACATTCCAGAGCCTGAAATCCAAAGGACATGCATTGAAATTAGCCATGTCAGTCACCAGTTGA-GTCTACTACATG ......:..x..x.....x..:.....:........:..x..x..x........:....:...:...........:..x...........x........:..:.....:..:.............................:.....:........:........:..:..............:.....x........:x.:.....:....:......x...::x..:x.:.x.:----------------.:......::.:...-x....:...x.. 236M16I15M1D12M 215/263 81.7% 279/94230402 0.0% 17/263 6.5% 38894211 NA +7266 chr4 + 190214555 84696721 84696720 84696847 127 ACTTCCATTACCTCACGATGGACTCTGATGAATTCTCGTGGGTCCCCTTTTGCCCAGGGTGGAAGGATAACATCTCCAAGCTTGGTGCCATTTTGTTTACAGCCTATGCAATTGGATACATTAAAAA chr4 - 94230402 45802285 45802284 45802406 48427997 48427996 48428118 122 ACTCAGATTACCTCCCGATGAACTCTGATAAATTCACGAGGGTCTCCTTTTGCCCACGGAGGGAGTATTACATCTCCAAGTTTAGTGCCATTTTGTTTGCAACCTATAAA-----ACAAATTAAAAA ...:xx........x.....:........:.....x..x.....:...........x..x..:..x..x...........:..:..............:..:.....:x.-----.:.x........ 110M5D12M 100/122 82.0% 122/94230402 0.0% 5/122 4.1% 38894436 NA +3376 chr4 + 190214555 84700280 84700279 84700352 73 CTGCAGCCTCAA-CTCCTGGGGTAAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..-..:.....x.x.....x.:.x.xx:x........::::.........:......x...... 12M1I61M 54/73 74.0% 74/94230402 0.0% 1/73 1.4% 66503154 NA +11974 chr4 + 190214555 84702342 84702341 84702543 202 GCTCTACGTACCTAGATCAAAGTTGTTGGAATTGAACAGGAATTCTGGTAAATAAAAGAACTCTGGGATAAGTTCTTTTACATCTGCCATATTGTGCTTTGACGCTGAATACCAGGCCTCGCGCACACTGTGAAACATCCGGTCAGCCAGGTCAAAGTGGCCACCCTGTGGGCAGAATAAGACACCTCTCTATTAGAGAACC chr4 - 94230402 45804532 45804531 45804733 48425670 48425669 48425871 202 GCATTGCTTACCGAGATCAAAATTGTTGGAATTGAGCAAGAACTCAGGGAGGTAGAAAAATTCTGGGATGAGCTCCTTCACGTCTGCCATGTTGTGCTTTGATGCTGAGTACCAGGCCTCTCGCACACTGTGAAACATTCGATCTGCCAGGTCAAAGTGACCGCCCTGCAGGAAAAAGGGAGAACCATCACATCAGACCACC ..x:.:.x....x........:.............:..:...:..x..x.::..:..:..:........:..:..:..:..:........:...........:.....:...........x.................:..:..x..............:..:.....::..x.:..x::::x...x::x:..:...xx... 202M 154/202 76.2% 202/94230402 0.0% 0/202 0.0% 38897810 NA +10919 chr4 + 190214555 84704332 84704331 84705544 1213 TTTTACCTGTAGCCTTAAGAATATCTGTGTGAAAGGCTCCATCCTTACAAGGTATGAGGCCACAATCATTGCAGATGAATAGTGGGTCCCATAGTGGTATGCAGGAGTTTCTCCTGTTTAAGAAAATTAAA------GCACAATTGAAACCAAAAGAAGAAATATGAAAAATAAA-ATTGGTATTAATTTATGCTTGAAAATGCTAGCCTATGTGATAACTGTAACACTAAATGCAATTAGTACTGGCATTTGCAGCAGGAAAACTTCAG------GACACCACTACCCCTCTCTTCTATATTT-------GACAGTAGTCCAGATTAAGTATAA-TTCAATGGCCTATT----------CCCACAAACTTAGTATGTCT-----ACCAATTTCATGT-TTTGAGGCTTACTATAATAGTTAACCCTTAATAGTAGACCATCTTCCACTAAAGCAGGATATTGACTTA---TAGTTTTTATTAGGTTCTG---------GCTTTGCAATTATATATTTCTCTAAATCATTGTTTATGAATGTTAAGCACTTTTAT--GTATTTTTACTACATATTCTCCTTGGCAGAGAGGGGGTGGGAAAAAAGAGTTCACAT---AGGACTACAAGCTTAGGCTTT-----------CTTTCTCCTTTGTTTTGC----------------CTTTTTGAGGGAGAAACACCATAAACATTAAACATAATAAATAACAAG-TAAACTA-TAAGGTTTTAGAGTATAGTAATTTTTTTTAAATGCAAAA------GGGTTCCAAAATTGCCTCAATAAAATTAAAGAGAGACAATAAATTAAAGTATGGTTC--CTGGACT-AAACATGATTAG-----AGACAGAGGCAGATTATGATGGGAAATTTCTGCCCTATGCAAAGCAGGAATACTTAGTTTTCCACCAATACTCTGATAAGCTATTTA-AAATGCCTTCTAAGCATGGCCATAAGTTGGCATGCAAACCTGATTCCTCTGCTATAATAATCTGCATATATGTGTGGACATATAATACATATAGATATGATATATAAGCAATTTGAAGGAGGATGTAGGAATGTCAGACC------------GCTACATAAT----------GACTTACTTTTGAAACTTGGGTACAAAGTCCAATGACAGAAAAA------GTTCCTTACCATTAGGATCCTCCCAGTCTTTATACCGCTTCTTATACTGAGCTAATCGTTCATCTGTTTGTGCTCCCATTGGCTTAGCCAGGTTTCTAAACGTCTTGGGATTAGTAAGATCCACCTCC-TAAAATACAAAATGTAACTCAATTCCAAGTTA chr4 - 94230402 45805411 45805410 45806640 48423763 48423762 48424992 1230 TTTTACCTGTAGTCGTAAGAAAATCTGCGTAAAAGGCTCCATCCGGACAAGATAGGAAGCCACTATCATGGCAGATGAATAGTGGGTCCCATAATGATAAGCTGGAGTTTCACCTGC---AGAAAATTAAACATCATGCACA--TGGAAGAAATAAAGCAGTTAGGTGAAGCAATTACTGGTGGCAGT----ACTAACGAGTGCTGCCTTGTATTTACTCTGTGATCGTGGACACATTTAAAATTGGCACTTGTAACTTTCATTCTTGAGTCATCAAAAACAATGTGTTTTCTCGTGGCCATTTCAGTTAAAACTGCAGTGCAG--TAGCTGTAAATGCAATGGGCTTCTGCCCAACAGGACCGCATGGTTAGTCTTTCTTTTTTGTTAATCTGAAATGCTTAAAGCATTCCAACACAGCTA--------TGGTGA-----TTTCTACTGATG--GAACATTAGTTTACTTTCATTCTTCCTGACTACTGTGGAAATAAGGCTTGGAAAGAAACAGTTCTCAGAATTTCTGGCTTCAGATTTCGTACAGCTAAAATAACATCTAAAATACAGAAT-------ACAGAATTTGATTGTGA--------TTCACATTGAAGCATTACAAACTTAAGAATTTCCTAGTGCCTCTATTCCCTTTGGATAGTAGCAAGCAAAGTGCTACCTCCTGAGCAGGAAA----ACATACATCAAACTCAGAAACGAAAAAGCTGAACTGCTGCTACTGCAGAG----GTATTCCCACTCCTCTGCACAACTTACTGCCTTTCAGCAGCACTCAAACTGTACTAGATAAAGA-GATAACTGGATGTGTGCTTCTTCTGTACTTGCCCATTTCTAGCCTTTAGACATCATTGAACTGTTCTGAAAAACAACTGTTTTGT--------------CTTTATTTT--------------------TATATATAAATACATGCTGGTCAGATTTTAAAATCAACAATATAACAATACTCCTCTGCT-------TCT---------------CATTTAATATCTGTTCATA-GGTCCCTAAAAGACCCGTGGTAGGGCTCTGCATACCCACACCCAGAAGTCTTGAGTCATGTAATTAAAATTCACAACATCCTCCTGAACTGTGG---CAGGCTCCTCTCCCTGCAGGATATACCATTTCTTACCATTGGGATCTTCCCAGTCTTTGTATCGTTTCTTGTACTGGGCCAACCTGTCTTCTGTTTGAGCTCCCATGGGCTTTGCCAGGTTTCTGAATGTCTTGGGATTTGTAAGATCCAACTCCTTTAAAAACAAAACAAACATCAATTCAATTTTA ............:.x......x.....:..:.............xx.....:..x..:.....x.....x.......................:..:..x..x........x....:---...........------.....--..:..xx..x.:.:x.:x..x.x:..::..x-.:....:x:.:.----:..x:x:.:....:x.:.:.:.xxxxx....:.:xx.::.::..x...:x.:.....:...:.:.xxxx.xx...x..------:.x..x.:xxx:::....x.xxx:....-------:..x.:...x...--..:x.:...-.x......x..x:.----------x..:..x:x.....x.x...-----:::...:.x.x:.-:..:.:..x.x.:.xx.:..:..--------.:..::-----:...:...:.x.--.:.:...:::...---.x:..:..x:.::x.x...---------.x:...x..xx.x.:.x.....x:...:x:..x:.x:::..x.::x:..x:.xx.x--::..:.xx.x....x.x.-------:....:xxx.:x..x..--------.......---..x.:.....:....:.xx..-----------..x.::......xx.x.:----------------.:.::....x::....----.:.x....:....x:.:x..xx..x...-.:....:-.:xx::.x:....----...x.:::x:.:xxx....x..------.xx..:..:x.x::.::x..:x:x.:..:.x.:...-:....x.x:.x..:..x...--...x...-:xx...xx:...-----.....xx:x:::.:.:.xx..::...:xx...:::.:.--------------...x:....--------------------...x..-....:.x.x..::x..x:x::xx..:.:::..xxxx...xxx.:.........-------...---------------...x.....:x.:.xx...-.:.x:x...:x:.:::.x:.x...::x:x.x.xxx:..x...------------.::.::....----------:..x.x..::....x:x...---..::x...xx.xx.x.x.::.------:..:.........:.....:...........:..:..:.....:.....:..:..:.xx..x........x........x.....x...........:..:...........x..........x....-.x...x......::x.xx.......x.xx... 117M3D11M6I5M2D31M1I12M4D78M6I28M7I13M2D9M1I14M10I20M5I13M1I23M8D6M5D12M2D13M3I19M9I56M2I18M7D17M8D7M3I21M11I18M16I16M4D28M1I7M1I13M4D22M6I36M1D20M2I7M1I12M5I38M14D9M20D6M1I53M7D3M15D19M1D42M12I10M10I20M3D21M6I128M1I32M 697/1103 63.2% 1230/94230402 0.0% 237/1103 21.5% 38898921 NA +11755 chr4 + 190214555 84708903 84708902 84709350 448 ATTTACCTCTGAGTCATAATCTGCAAGGATCCAGGGGAAGACAGGATACTGCATGAGATCATTATATGATCTGCCAGCCAAAGTGTTCAAATGCATCAAATATTGGAAGTTGCTGATTTCACCTCTCTGGAAAAAGA-------------TAAATA-TTCATTT------------TTGAGCTATCGATTATT-----------TCCACTATGTTCAGCTTTTAAAATTTTATATACAAAATGATGTAAAGGACAGTTTCTTTTTA-----------ACAGAT---TTCAG-----AACAATGAAATACTTTTTTTTCTAAAAAGAA--------TGAAAATAAAACAT-----------------------TTTCTCTATGGTA-TATATTTTAT---------GGAT--AATTAAAGTGCTTTTAACTGTATGACTTCTAC------TCTAATTACGAACTTCTAAGGAAGCTCATATATTCATTAAACTTACCTCCCATCTCTGAGTCACAGACTTCTCTCCAACCAAAGTGCTAAGTAACCCAGATCTA chr4 - 94230402 45807063 45807062 45807589 48422814 48422813 48423340 527 ATTTACCTCTGAATCATAGTCTGCGAGGACCCAGGGAAAGACAGGGTACTGCATGAGATCATTGTAGGATCGGCCGGCCAGGGTGTTTAAGTGCATCAGGTACTGGAAGTTACTGATTTCTCCTCTCTGAAGGAAGACATAACAAGGCTGTAAAGACCTCACTTCACAACAATCAACTGAGCTGTCAGTTCTTGGGTGCTTGCATTAGCTCTCTCCAAACATAGGAAACTTATTT---CAATATTACAACGTCCAAATTCTGTTTATACTTTTAATGATAGACTCGTTTAGTATTTGATGATGAAATGC------ACCCAAAATGAAATATAATTTGAGCATGAAATATAACCCGTTAGAGTACTGAGATAGCTTTTCTAAAGCAGTATATTCTACCTGTTCATAGGATGCAACTCAGGTG-TACTAACTATAT-ATCACTACAAAATGTGCAATTAAAAAA----AAAAAGGATCAT-----------ACTTACTTCCCATCTTTGAGTAACAGATTTTTCTCCCACTAAAGTGCTAAGCAAGCCAGACCTA ............:.....:.....:....:......:........:.................:..x....x...:....::.....:..:.......::..:........:........x........:.::....-------------....x.-:...:..------------:......:..::..x..-----------.:x:..x.x.:..:x:x.x::..x:....x.---x...:x.::..x.xx..:x....x....-----------.:...:---..:..-----:.::.......:.------x:.:....x...--------...:x..:...:..-----------------------:..:....x:.:.-......:..:---------....--..:.x.:...-.x:.....:...-.::x....------.x:.....x:..x----..::.:.x....-----------......:........:.....x.....:..:.....x..:...........:..x.....:... 137M13I6M1I7M12I17M11I31M3D28M11I6M3I5M5I13M6D12M8I14M23I13M1I10M9I4M2I10M1D12M1D8M6I13M4D12M11D64M 315/422 74.6% 527/94230402 0.0% 131/422 31.0% 38901840 NA +6222 chr4 + 190214555 84713154 84713153 84713267 114 CCTACCCCTGCTCCACACTCGTGTTTGGTCGTTGCCCAGATACAGATTCTGAACTGTCCGTTAGAGATGGCACTACAGCCAAAAACCTGAAA----AATTTAAAATAGCGTAAAATTA chr4 - 94230402 45808117 45808116 45808234 48422169 48422168 48422286 118 CTTACCCTTGTTCTACACTGGTGTTCGGCCTCTGTCCAGACACCGACTCCGAACTGTCAGTTAGAGATGGCACCACAGCCAAAAACCTGCAACAGCAGTTAAAAGGAGATTACCATTA .:.....:..:..:.....x.....:..:.x:..:.....:..x..:..:........x..............:...............x..----.:..x...:x..xx..xx.... 92M4I22M 89/114 78.1% 118/94230402 0.0% 4/114 3.5% 38905037 NA +3017 chr4 + 190214555 84714941 84714940 84714991 51 CTCCGTCTCAAAAAAAAAAAAAAAGAAGAAGAAAAAAAGAAACTAAAGTTT chr4 - 94230402 31896470 31896469 31896520 62333883 62333882 62333933 51 CCCCCCCCCAAAAAAAAGAAAAAAGAAACTCAAAAAAAGAAACTGAAGTCT .:..x:.:.........:.........:xxx.............:....:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 52818471 NA +6436 chr4 + 190214555 84715291 84715290 84715389 99 ACAAGACCTTTGATAGACTTTGTTTCTGATTCCTTTCTGAAAAGCAAGGAGGTAATTCCGTCCATCTCCAGAGAAAACTTCCACAGCAATAGGCTGAAA chr4 - 94230402 45808580 45808579 45808678 48421725 48421724 48421823 99 ACAGTACCTCTGATAAACTTTATTTCTGACCCCTTTTTGGAAAGCTAGAAGATAGTTTCGTCCATCTCCTGAGAAAACTTCAATTGCAATTGGCTGAAA ...:x....:.....:.....:.......::.....:..:.....x..:..:..:..:...........x...........x.:x.....x........ 99M 80/99 80.8% 99/94230402 0.0% 0/99 0.0% 38906711 NA +9281 chr4 + 190214555 84716888 84716887 84717048 161 TGACTCACCTGCAGGAGATATCTCCTTTTATGAACTTCCTTGATATCTTCATATGCAAAAATGCTGCATGTTCTCTTGAGTTGACTAGGGCCTTGCCTGGCTCCTCTAGGAATAATAGGCTCATGCATACTACAGGCAGCCAAGAGAA--AAAGCAAATAAAA chr4 - 94230402 45808955 45808954 45809117 48421286 48421285 48421448 163 TAAGTTACCTGCAAAAGGTATCTCCTTTTATGTACTTCCTTAATATCTTCATATGCAAAAATGCTGCACGTTCTTTTGAGTTGACTTGGACCTTGCCTTGCCCCCCTTGGTATGATTGGCTCATGCATCCTGTAAATGAGCATAAACAGGAAAGTGATTAAAA .:.x.:.......::..:..............x........:..........................:.....:...........x..:........x..:..:..x..x..:..x...........x..::.:::::x..x:.:x.--....::.x..... 148M2I13M 126/161 78.3% 163/94230402 0.0% 2/161 1.2% 38907933 NA +12491 chr4 + 190214555 84718402 84718401 84718599 198 CTCTTCATTCATTTACTTACTTTGGAGGTAAGGTTTCAATATCTCTTATTTCCCTGGTTGCTGTCATGGTAAATCCATCAATCACATAAAAATGCTCTTTACCAAAAAGAAGGAGCCCCTCACTGGTATCTAGGCCCTGGACTCGAGCACAGCGGTACATGTGTTGGATCTATAAAGAAGCCCACAAACATTCATTAA chr4 - 94230402 45809329 45809328 45809523 48420880 48420879 48421074 195 CTCTTTATTCATTCACTCACTTTGGAGGCAACGTCTCAATGTCCCGTATTTCTCTGGTGGCAGTCATGGTAAATCCATCAATTACGTAGAAGTGCTCTTTGCCAAAGAGGAGCAGCCCTTCACTAGTGTCAAGGCCCTGAACCCGAGCACAGCGGTACATATGCTGAATCTGAAAAGAAA---ACAGGCACTTAGCAA .....:.......:...:..........:..x..:.....:..:.x......:.....x..x....................:..:..:..:........:.....:..:..x.....:.....:..:..x........:..:.................:..:..:....:x......:---...::..:.:.x:.. 180M3D15M 157/195 80.5% 195/94230402 0.0% 3/195 1.5% 38909073 NA +10907 chr4 + 190214555 84721401 84721400 84721575 175 CACAATACCTTTTCTCCTTCCTCTAACAGGCGCAGTAAGGTAGCATTATCTGTTTTCTCCTCCTCTTCTATGGAGCTGCCCTCAGCAATCTGGTCTTGTAGCTGCTCCTGGTTCTCCTCATCTCCTCCATCAGGTGCAGATCGGGAGCGTTTTAGAGGAGGCTTGACCAAACCTA chr4 - 94230402 45810597 45810596 45810771 48419632 48419631 48419806 175 CACAATACCTTCTCTCCTTCTTCAAGAAGTCGAAGCAAAGTTGTATTGTCAGTCTTCTCCTCTTCATCAATTGAACTGCCCTCAACAATTTGATCTTGTGACTGTTCCTGGTTCTCATCATCTCCTCCATCAGGAGCAGAGCGAGACCGTTTCAGGGGAGGCTTCACTAGGCCTA ...........:........:..x.:x..x..x..:..:..x.:...:..x..:........:..x..x..x..:.........:....:..:......::...:...........x.................x.....x..:..x.....:..:........x..:.::.... 175M 139/175 79.4% 175/94230402 0.0% 0/175 0.0% 38910804 NA +12341 chr4 + 190214555 84724401 84724400 84724620 220 ATCAAAATCAAAAAGGCAGGCTGACCTTTGACTTTAGCAATAGTGTCTTCCCCATGCTCTGGTTCTTGCTGAGCAGCTTCACCTTCTGAACTCTCCACAATGGCGTCTTGGACAATGGCGGGATTGCCAGAGGCCAGTCGCATGTAGTACTCTTTACTGTCATAACTTACGGCTCTTCTATATCGAGCAGGTTTCTAAGAAATGACAAAAGAAAATGACT chr4 - 94230402 45810948 45810947 45811167 48419236 48419235 48419455 220 ATCAGGACAGAAGGAGTGATCTAACCTTTGACTCTCGCAATTGTGTCCTCCCCATGTTCTGGCTCCTGCTGAGCAGTTTCACCCACTGTGTTTTCCTCTATGGTGTCCTGGAAGATGGCAGGGTTTCCAGATGCCAGGCGCATGTAGTACTCCTTACTGTCGTAACTTATAGCCCTTCGGTAGCGAGCAGGTTTCTTAGAAATAATTGAACACAGTCACT ....::.:x:..:::.:::x..:..........:.x.....x.....:........:.....:..:..........:......:x...x::.:...x.x....:...:....x:.....:..:..x.....x.....x..............:........:.......::..:....x:..x.............x......:.:x:..x.x.:.x... 220M 165/220 75.0% 220/94230402 0.0% 0/220 0.0% 38913453 NA +9921 chr4 + 190214555 84726529 84726528 84726952 424 CAGGCTGCCCATTACTA-ACATGCCTCATAATTTGTTAGTTTATGTGTGAAGCAAAAGATGTTTTTATAGTGAGAGCAGTGAAA----------ACTCAGTCTGTTAGTGAGTGGCATATAAA-------TCCTAAAAAGAGATAATTAGA-AAAAGCTGAGCAACAGTAGAACAACATCTCTCAGCCTGAATGAAACCAACGGTTCAACTCTAAGGAACTTATA--GGAAGAACAAATTGAAAGCCAATCTTTTAAGT-TAGTCTAGTCTACCATGCACTTAAAAAAAAAACCAGAAAACAAAAAACAAAACTACAAGTAGTTTACATTCTTTTACT----GTAATTTGTGTTTTACCTTTTGAGGAA---TATCATCGGGTGTCTCAGGCTGTTTACTTGGGATCTCAGACTGAAAACAGGGTATTAAGTATAGACATATCAGAAAAAAAA chr4 - 94230402 45812938 45812937 45813373 48417030 48417029 48417465 436 CATGTTGCCCATTACTACACATTTTCCGTTGACCATTAGTTCAGACCCCAAGCCACAACTCTATACACAGTGAGAACAGTGACAGCACAGCCCAACACAGCCTGTTAGTGTGCAGCAAAGAAGGGAAGAGCTACAGAAAGTTGTATTTAGGTGAAGGCTGAGGAG-AGCACAGTGAAGTCCTCTAATGTGAATACTGAAAACATCTTTAGGCCTGGAAACATATACTGAAAGAGCAAGTTGAAAGCCAAATGTAGAAGCCTTGTTAAGATTGCCA---ACATGCAGGAGAAAC-----------AAAAAAAGTTGTATTTATTTGACATTCTTTCAGTCAGTGTATTTGTTTCTTTACCTTTTGAGGAACGGTATCATCAGCTGTCTCAGGAAGTCTACTTGAGAGGTCAGACTGAAAACAGGGCATTAAGTATATGC--ATCAGAAAAAGAA ..x.:............-....x:::.:.x:x:::......:.x::x:x....x.x.:x.x.x.x:.:.......:......x.----------..x...:.........x.::...x.x..:-------::x:.:....xx:..x....:-:..:......x.:-..:.x.:::.x:..::::.::x.....:xx:xx...:x:.:x.xx.:x:.:...x....--.:....:...:...........x:x.xx...:-.x..:x..x:.:...---..x.:x.::.:....-----------...x...::.::.xx..x..x.........:.x.----...x..xx.x:................---.......:.x.........xx..:......:..xx.................:..........x:.--..........:.. 17M1I66M10I29M7I21M1I13M1D59M2I32M1I15M3D15M11D34M4I27M3I66M2D13M 273/407 67.1% 436/94230402 0.0% 46/407 11.3% 38913591 NA +15873 chr4 + 190214555 84733365 84733364 84733612 248 GAATTCTGCAT-ACTCACCGCCACATTTGTCTCTTGCTCAGTTTCTGGCACGTAAGGGTAATGGTTATAAAACATATCATTTCGCACCATCTTTTTCCTCATCCTGCAGGGCCCTTCTGTCATCTCCAGCATCCACTTGTCGAGGTGGGAGCCGATGGGAGGGCCCCACAGCCCCCGCTCCCTCAACAGCTCGCACTCGATCTGACACCACTCTTCTGTCACGTACTTCAGGGCATTCTGCTGACGCTG chr4 - 94230402 45814071 45814070 45814319 48416084 48416083 48416332 249 GAATCTTGGATTACTTACCAGCAAGTTTGTTTCCTGCTCAGCTTCAGGCATGTAGGGATACTGAGTGTAAAACATGTCATTTCGCACCATCTTCTTCCTCATTCGGCAGGGCCCCTCAGTCATCTCCAACATCCACTTGTCAAGATGGGAACCAATGGGAGGACCCCACAAACCTCGCTCTCGTAGTAACTCATATTCAATTTGAGACCACTCTTCTGTCACGTATTTTAATGCATTCTGCTGACGCTG ....::..x..-...:...:x..x:.....:..:.......:...x....:...:..:..x..:x.:........:.................:........:.x.........:..x..........:............:..:.....:..:........:.......:x..:.....:.x:.::.:...::.:..:..:...x...................:..:.:x................. 11M1I237M 198/248 79.8% 249/94230402 0.0% 1/248 0.4% 38919294 NA +6196 chr4 + 190214555 84735037 84735036 84735170 134 CCTTACCTCCTGATATTCTTTATATTGTGTATCTACTAAGTCACGAACAACAGCAATGTGAGTAAACATCCACTGCGAAATCTCCTAACAATGGATGGAAAAAGAGTCTTAAT---ATTTCATGG-----ATTTCTGGAAAA chr4 - 94230402 45815247 45815246 45815385 48415018 48415017 48415156 139 CCATACCTCCTGATATTCTTTATACTGCATATCAACAAGGTCTCGAACCACTGCGATGTGAGTAAACATCCATTGAGAAATTTCCT---AGTAGAAAGATAAGGAGACAGAATCAGACTTCATAGAAGCAAGTTATGGAAAA ..x.....................:..::....x..x.:...x.....x..x..:.................:..x.....:....---.:.:..x:..x..:...x.xx...---.:.....:.-----.x..x....... 86M3D24M3I9M5I12M 104/131 79.4% 139/94230402 0.0% 11/131 8.4% 38919790 NA +13319 chr4 + 190214555 84736162 84736161 84737396 1235 AAAAGTACCTGGGTGGAAAGACTGTGTTTATTAAGACCACTTTCTTTTCGATTCCTTCTTGATCCTGTTAACTTGGAAAGACCAAAGCCACTGCTGACACGGGATAATTTGGACTGTGTGGTGGGCGCTAAAGCTTCTCCTCGACTTATGCATTTCTTTTCATGGGCTATTAAAAAATCAAATTAGATTATTTTATAATTTCTCCATGTATTTATGAGTCTTACTTTAAAAACTTATCTGGTTATAAACTACAACCCTGTAGTTAACAAAA----GTAGCACATATTACAGATGCAGATA---TTACATTCAGATATCACAAATTTATTTATTGGTAATCTTAAGGATGACTGCTCGCAAATTGTATTAGCTGAACTGATAGTTGGTTGAAAGTTCACAGCTCTGTAATAACATGCAAATTTAACTATAACGAGTTTCTATATTAATAATTCATAATCACCTAATTAAAACCTTTGGTGTTGGGTATACTTCGCAACTTAGAAACTATTTGGATTTTTAAAAGGCTATACAGCTTATACACTAGATTATATAATGCC----ACCAG-----AGAATCTATGGTAATAAGCTATAATTTAATAC---------------------------GTCAATATTACTGCAACAAAATGTATGAATATTCCCATACCAAGTAGGACAAAGAAAGATAAATTAGGTTCTGTTATAAAGTCAGTTTTGG--------CACCAAATTAATGAAAAAACAGAGCTTTTTGAATTTCAAAATTATAGTTAAGGGATTGTGGACCTGTAGCCAAGACAGTGACAATACTAGAGCTGTTAGCAATGCATTACATTCTGAATGCATAAACGCCTGATGTATAACATACC--TCAGATGCTAAAAAAAAAAAAAAAAAA--------ATCAAAGAGAACTAAGATCTCAGTATAATCATTCTAGAATGGTTGTTATATT---GATTTTAAGGATGACTTTA-TAGAATCCTTTTGTGAATGCTGTAGTCACATATTTAAAGTATACCCATAT-ATGATAGCCA---CATGTAAATCTCCTGGTGGTATGAT-----------------CTCTGTAGGCCTTACCCAAATGATTCTGCCAGCACTTCAGGGCAGCTTCTTCAATGAGTGGCCTTGCTGTAGCTATGTCCACGTGGCCCCTTTCATTCACAGGTAGAGTTACTTTGAAAAGTTCCTCTAAGACTTGTTTCTTACTATGTATCAGTTCAGTCCAAACTCTGTTGACAGCTTTTATGAGAAGCTGACGCCCTAGTAAACAAACAAACAAACAAACAAAAA chr4 - 94230402 45816513 45816512 45817652 48412751 48412750 48413890 1140 AAAACTACCTGCGTAGAGAGATTGTGTTTGTTGAGTCCACTCTCCTTCCGGTTTCTCCTGGAACCTGTCAGTTTAGAGAGGCCAAACCCACTGCTGACTCGTGAAAGCTTGGACTGTGTGCTTGGAACCAAGGCCTCCCCTCTACTGATGCACTTCTTCTCATGGGCTG---AAAAATAAGG-------ATTTTACG-------CAT-------TGGGTTTTTCTGT---------TGTTGTTGTCATCATCA--CTGGTATTTCACTAAATAGAGTAACAATTCCTACTGCTCTCGACAACTCTGTGTGCTTATCTGACTTGTGTGTTTTTTG----TTTTAAGGA------------------AAGAGTTGATTTTGTTGTTG-TTGTA---TCACTGTT-------------------------------GTTTTTAAAAGGAGAGATT-------CCTAAGAGAAACCTT--------GGCACTTTTTGCACTTTAAAA-------GGATT---AAGGGATTAACCTGATTA----ACAGATC-TGTGACTCCTTTCATCAATTATCAAAATCAAGGTTTATCAGCTGTAAGTTGTCACCTACCCTCCCTCTAAACACCAACTAGTTTCAGTTTTGCTGAACTACACCCCTTAAAGA----CAAAGTGGATATTTCAAAGAAGGGAGA--CAGTATCTGT-AGAAATCCAGTTCTGAGGAAGGCCCAACAGGTCATC--ACAAGCAGTATTCATGGAAAGGCAAA--------TAAG------TGAACC---AGCC----------CACCACCACTGCAATCCATAAGGCACTCTTTGGTATATGCTCGCACA---GAAACACAAGAAGCCATTAGGATGTGCAAAAGCATGAATAAAGGTCCCGTGTATGGAAGAGAG-TAAGTTTTTCCTATA-----CCCAGTGCTGTTTCTGAGTCAGAGATTTTAA-----ACTTTAATAACA-------GTAAGTATT-TACCAACACACAAAAGGTAGGCCCATATCAAAACATCCAGTGCATGTGGTTCACTTTGGGGAAAGCTACCACTCAGAACAGATCTTCAGCTGCACTTACCCAAATGATTTTGCCAACACTTTAAACTTGCTTCCTCAATTAAAGGTCTTGCAACAGTTATATCCACTTGGCCACGGTCATTGACAGGCAGTGTCACTTTAAAAACTTCTTCTAAAACCTGTTTTTTACTGTGAATCAGCTCTGTCCACACTCTGTTTATGGCTTTCAAAAGAAGCTGACGACCT-GCAGAGGTACAAGACCACAAACAGCAA ....x......x..:..:...:.......:..:..x.....:..:..:..:..:..:..x..x.....:.::..:..:..:.....x...........x..x..x.::............x.x..x:.:..:..:..:....x...x.....:.....:.........:---......x.::-------......::-------...-------..:..:..x..x.---------.x.x...:.x.x.xx..--.:x...x..x..x...----...:..xx.x:...x.x.x:x..:.---:.:::.x.xx..x.x..xx:.x.:...x...----.:.......------------------.xx..:...x:.x:.x....-...x.---....x.:.-------------------------------....:..x.xx:.x.:x.:-------.....xx:.......--------..:.:x:..:...x:...:..-------.....---..::.::..xx.x.x...----x:....:-.:.:.:x..----.:..:-----.:....x.x.x.x..x....:...x..:x:..---------------------------x...:.x..:...x.x:.x.x:x:x.:..x.----..x.x::::..xxx.......:.:x:.--:..xx.....-.x...x:.....:..:--------..x..::.:.x:--.x..:...x::.:x.x...xxx....--------....------..:...---....----------..x:..:.xx..x:.:x::..x...:.x:x.xx.:x....x::x..:---..x::.:..x.x:..--.x:....:xx....:x.x:..x...::--------..x:......:-....x.:.:xx....-----:.:..x::x...x:.:x:.:---........-----......-..:x.-------..:.:.::.-..x:x...:.:xx..:...x:.......-.x:.:.x...---.....::x..x.:.x.x..x.x.x.-----------------:..x.:x.xx...............:.....:.....:.::x:x.....:.....x.:x..:.....x::..:...:.....x.....x.xx.....x.....:..x..:.....:....x...:.....:..:.....:.....:..x.....:..x.....x........x.::.....:.x:...........x...-.:.:.x:x....:xxx.......:x.. 169M3D10M7D8M7D3M7D13M9D17M2D16M4I25M3I31M4D9M18D20M1D5M3D8M31D19M7D15M8D21M7D5M3D18M4D7M1D9M4I5M5I32M27I31M4D27M2D10M1D16M8I12M2D26M8D4M6D6M3D4M10D47M3D15M2I27M8I11M1D15M5D20M3I8M5D6M1I5M7D9M1D28M1I10M3I25M17I200M1D27M 697/1054 66.1% 1140/94230402 0.0% 267/1054 25.3% 38919649 NA +3035 chr4 + 190214555 84737437 84737436 84737502 66 ATTTTTCTTCATGTTTACATGTGGGAATTTCGACTACAGTATTTAATGTAAAAAAAACAAAGCTCA chr4 - 94230402 35224361 35224360 35224426 59005977 59005976 59006042 66 ATTTTTTTTTATACTTACATATGTGTATATGTAATATATTATGTATTGTAAAAAAAAAAAATCTCA ......:..:..::......:..x.x..x.xx.x..:.x...x..x...........x...x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 49513076 NA +7935 chr4 + 190214555 84739005 84739004 84739126 122 ATTACCTTCACTAATATCTTGGCTGTAACTACCATCTGGTTCAATGTCCGAGGGGATCATAATGTGCCATGTGGTCATGCGGGCTTCTGCTTCCAGTCCAAATCCATCCACGTTGCTGAAAA chr4 - 94230402 45818435 45818434 45818556 48411847 48411846 48411968 122 ATTACCTTCACTGACATCCTGATTGTAGACTCCATCTGGTTCTATATCAGAAGGGATCATAATGTGCCAAGTTGTCATCCTGGCTTCTGCTTCCAATCCAAACCCATCGACGTTGCTACAAA ............:.:...:..::....:x:x...........x..:..x..:.................x..x.....x.x..............:......:.....x........:x... 122M 100/122 82.0% 122/94230402 0.0% 0/122 0.0% 38920570 NA +17469 chr4 + 190214555 84740155 84740154 84740425 271 TTAACATGGCAAACTGAACCTAAAGGAT--TTACCTTCCAACATGTAGATTTATCAAGCAGTGGGCCAGACAGCTAATGAATTCTTGGTCATGGTTCCCAGGTCCCAGGATCAAGTTTCTGTTTACAGTGAGGACCCTGAGTGAATCAAGCAGAGCTACTTGCTGAGGAACGGTTTTGTGTGCCCGTGAGAACTGGTACAAGATGGTCCTATTGAGGCAATGATACACTGCATCCAGTGACAATCCCTGTGATCTTCTCTTTGACTAAAGACA chr4 - 94230402 45819278 45819277 45819549 48410854 48410853 48411125 272 TTCACAAGGCAAA-TGAACTTCTGAGATGCTTACCTTCCCACATGCAGATTAATCAAGCAGTGAGCTAGACAGCTGATGAACTCTTGATCATGATTTCCAGGTCCCAAAATTAAGTTTCTGTTCACAGTGAGGACCCTCAGGGAATCAAGGAGAGCCACTTGCTGAGGAACAGTTTTGTGTGCTCTTGAGAACTGATATAAGATAGTTCTGTTCAGGCAGTGATAAATAGCATCCAGCGATAGTCCCTGAGATCTTCTTTTTGACTGATGGTA ..x...x......-.....:.xx::...--.........x.....:.....x...........:..:........:.....:.....:.....:..:..........::..:...........:..............x..x........x.....:..............:...........:.x.........:..:.....:..:..:..x.....:.....x.:x........:..:.:......x........:.......:.x.::. 13M1D14M2I243M 223/270 82.6% 272/94230402 0.0% 3/270 1.1% 38920877 NA +13305 chr4 + 190214555 84741757 84741756 84741941 185 TTACCTGTGCAATTAGTTGAATTATAAAATCTATAAGAAGTTTAGATTCTTTGTTGAACATGCCTTGCCAAAGCTTGTCCACCACACGCTGTGTGAAATAAAACACATTGTTCACCAATACCTGGTAGCTTCCTCCACTGGTAATAGGCAGAGATGCATCTTCCCCTAAATTCCAGTAGGAAAAA chr4 - 94230402 45820167 45820166 45820351 48410052 48410051 48410236 185 TTACCTGTGCAATTAGCTGGATTATGAACTCCACAAGAAGTTTGGATTCTTTGTTGAACATGCCCTGCCAAAGCTTATCTACCACACGCTGTGTAAAATAAAACACGTTGTTCACCAGAACTTGGTAGCTTCCTCCACTTGTTATGGGCAGAGATGCATCTTCACCTAGGTAACAGCACAATAAA ................:..:.....:..x..:.:.........:....................:...........:..:..............:...........:..........:x..:.................x..x..:.................x....::.xx...:.x:.x... 185M 158/185 85.4% 185/94230402 0.0% 0/185 0.0% 38921590 NA +8367 chr4 + 190214555 84743695 84743694 84743835 141 ATTACCTAATAACACATCAGCTGCAAGCAAATGGTCCATCACGCTATCCAAAATGTAAGTTTGAAATTCTTTTTGCTGAGTTCTTGTAGACCTTTCAGGGGAAGCCTAATCAAGAAAATTTAGAATTAGAAACAGAACCAA chr4 - 94230402 45822666 45822665 45822803 48407600 48407599 48407737 138 ATTACCCAATAAAACATCGGCTGCAAGTAAGTGGTCCATCACGCTATCCAAAACATAGGTCTGAAATTCCTTCTGCTGCGTTCGTGTCGATCTTTCAGGGGAAGCCTGATTCAAGAAAT---GCAATGAAAACATAATGAA ......:.....x.....:........:..:......................::..:..:........:..:.....x....x...x..:................:..:x.::....---.x.x.::.....x..:x.. 119M3D19M 111/138 80.4% 138/94230402 0.0% 3/138 2.2% 38921029 NA +15100 chr4 + 190214555 84751477 84751476 84751728 252 CTTTACCTCCAACAAAAGATCAATTAGTGGAGTTTGCTTGCTGGCAGGAGTGAGACAGAGGTTGTCTATGATTAAGACCCGCATGAAGTCAAAAACGAACTTTTTAGCCGGGTGATTGGTCAGATATGTCTTGGTGCCCACATTGCAGTACTCTGATTGGCTCCTGTTCATCCCTGTGTCTGCTGCAAACGCTTTAAACTCTTCTGCTGGAGATCCAACTTCATCATCAAGGTCAGTCACCTAGTAAAATCA chr4 - 94230402 45825075 45825074 45825326 48405077 48405076 48405328 252 CTTTACTTCTAGCAGAAGATCCACCAGCGGGGTCTGTTTGCTGGCTGGTGTGAGACACAAATTGTCAATTATCAGCACACGCATGAAGTCAAACACAAACTTCTTGGCAGGATGATTTGTTAGGTACGTCTTGGTGCCAACATTGCAGTATTCTGACTGACTCCTGTTCATGCCAGAATCAGCAGCAAAGGCTTTGAACTCTTCAGCTGGGGACCCAACCTCATCATCAAGATCAGTGACCTGTGAAAAACA ......:..:.:..:......x.::..:..:..:..:........x..x........x.::.....x..x..:.:x..x..............x..:.....:..:..x..:.....x..:..:..:...........x...........:.....:..:...........x..x.x:..x..x.....x.....:........x.....:..:.....:...........:.....x....:xx....x.. 252M 198/252 78.6% 252/94230402 0.0% 0/252 0.0% 38926402 NA +13131 chr4 + 190214555 84753689 84753688 84753927 239 TTTCCTACCATCTCTGAGTAAGGGCGAATATTGAAGGGGAAGACGGTGGCTGCTAATGCACACAGGAAGTCAGGGCTCATCCACATGGAGGCAAGGTCTGGCACGTTGTGATACAAATATCTGAAGAACTGCATCAGGGTCACAGGATATTCTCGGAGCCAAGATCCCTCTTCTTCTGATTGCCAAGGCTGTTATGGGGACATGAGAGGAAACACTATGTTACAGTTATTGACACTGCT chr4 - 94230402 45826557 45826556 45826789 48403614 48403613 48403846 233 TTTCCTACCATCTCAGAGTAAGGTCGTATGTTGAAAGGAAATACGGTTGCTGCCAGAGCACACAGGAACTCCGGGCTCATCCACAAGGAAACAAGGTCTGGCACATTGTGATACAAATAGCGAAAGAATTGCATCAAGGTGACGGGATATTCTCGAAGCCAAGAGCCTTCCTCCTCAGACTGCCAGGGCT------GGGTTGAAAAAGAAAAAAGCATGTTAACGCCGATGAAGCTATT ..............x........x..x..:.....:..:..x.....x.....:.:x...........x..x.............x...::.............:..............x.x:.....:.......:...x..:...........:........x..:..:..:..x..:.....:....------...x::x:.:..:...x.x:......xx.:::x...x:..::. 190M6D43M 181/233 77.7% 233/94230402 0.0% 6/233 2.6% 38927132 NA +9650 chr4 + 190214555 84755261 84755260 84755419 159 CTTACTGAAGTCAGCATGCTGCGGAGCATTCCCAATAATAAAAAAACAGCTTCTGTGCATACGTTATGGATAGAAGAGACCACAGTTCCGCTGGAGGCAGGAACTCCAAAGATGAATGTCCAAATGGAATCCAAATCAAACTGC-AGAGGTGAAAGGGAG chr4 - 94230402 45827959 45827958 45828118 48402285 48402284 48402444 160 CTTACTGAATTCAGCATGCTCCTCAGCATTCCCAACAGCAAGAAGGCAGCTTCTGTGCAAACACTATGTACTGAAGAGGTAACAGTGCCACAAGAGGCAGGAACTCCAAATATGAATGTCCAAATAGAATCTAAATCAAACTATAAGAGGTAAGAGAAAG .........x..........x.xx...........:.::..:..::.............x..::....x.:x......::x.....x..:.x:.................x..............:.....:..........::-......:.:..::.. 144M1I15M 127/159 79.9% 160/94230402 0.0% 1/159 0.6% 38927302 NA +18205 chr4 + 190214555 84756854 84756853 84757185 332 TGATTATCCATTATCCTACGGTGATTCTTTGGA---ATACGTAATTTCACGCACCCCTTGCTAGATAATTCCTACCTGGCAACCCTGCTTACTCCGGCAGCTGATGACAGGCACACTGACCTGCAGGTTCTCAGGCAGCTCACTAACTGGCTGCTGCAGAAACAAGGCCATGAGGAGAAAATAGAGGGCAGGGACATTAGTGTGTTTAGGAAGGAATGACTGAAGGACTGGAAAACCAGGAAAATGACAAGCATCTCGGTTAATCTCCCTGACCGTCGATCTCCCACCAGCACTTCTGCCCACGTTGAATCCTAAG-AGAAGAGGAATATAACAGT chr4 - 94230402 45829203 45829202 45829529 48400874 48400873 48401200 327 TGTTAATCCATTATT---------TTCTTTGACGACAGACAGAATAACACTTACATCTTACTAGGTAATCCCTACCTGTGAGCCCTGCTTACATCGGCCGCTGGTGATGGGCGCACTGACCTGCAGGTTTTCAGGCAGCTCAGTGACAGGCTGCTGCAGGAAAAGGGCCATGAGGAGGAAATAGAGTGCAGGTACATTTGTGTGCTTGGGGAGAAGGGACTGCAGGACAGGGAAGCCTGGGAAGTGACATGCATCACGGTTAATCTCCCGGACTGTTGATCTTCCACCAGCACTCCTGCCAACATTGAACCCTGAGAAAAAGGAAAATACAAAAGT ..x.x.........:---------.......:x---.x..:x...xx...x:..x:...:....:....:........xx.:..........x:....x....:...::...:................:............x.:..x...........:..x.:............:........x.....x.....x.....:..:..:..:.:x.....x.....x..:..:..x..:..:.....x.....x.............x...:..:.....:...........:.....x..:.....:...:..-.:...:::....:..x... 15M9D9M3I280M1I19M 255/323 78.9% 327/94230402 0.0% 13/323 4.0% 38927651 NA +16218 chr4 + 190214555 84765804 84765803 84766030 227 CCATACCTAATACAGTTCCAATCTTATTAGTTAAGACAGAATCTGTCTGTTCAAGCCATCCTCCACCACTGAGTCCTTCTTTAAACTTGATGAGAATAGACTGATTACTTAGTAGGACAACAAGAATCCTCATGGCTGCTGTAACTGTGGTGGAATGTAAGTGTTCCTCCATAAACATCATGATCCAGTCAAAACCCAGTGTCTTCACCAGTTCTTCACAAGCTCTA chr4 - 94230402 45832112 45832111 45832338 48398065 48398064 48398291 227 CCATACCTAGCACAGTTCCAATCTTATTGGTCAAGACAGAATCCGTTTGATCAAGCCAGCCTCCACCACTGAGACCTTCCTTGAATTTAATAAGGATGGACTGATTACTCAGCAGGACCACAAGAATTCGCATGGCAGCCGTGACCGTGGTGGAATGCAGATGTTCTTCCATGAACATCATAATCCAATCAAACCCCAGGGTCTTGACCAGTTCTTCACAAGCCCTA .........::.................:..:...........:..:..x........x..............x.....:..:..:..:..:..:..:...........:..:.....x........:.x......x..:..:..:...........:.::.....:.....:........:.....:.....x.....x.....x.................:... 227M 191/227 84.1% 227/94230402 0.0% 0/227 0.0% 38933692 NA +8374 chr4 + 190214555 84766245 84766244 84766392 148 TACTTACTGCAAATTAATGCTTGTCTTTTCTTTAGATGTATAAATTAGTTTTAGCAAGATATCCAGAAGTCTGTTCCTCAAAAGTATAAGATTAGCTGATACAAGACCTCCAAACTCCTCTTCAGTTCCTAAAATAAAAATAAATACA chr4 - 94230402 45833065 45833064 45833208 48397195 48397194 48397338 144 TACTTACTGCAAATTAACAGCTGTCTTTTCTTTGGAAGTATACAGAAGTTTCAGGAGGATATCTAAAAGTCTGTTCCGCAGTAGAATAAGATTAGCTGAAACAAGTCCTCCAAAGTCATCCTCAGTTCCTA----GACAGTAAGTACA .................::x:............:..x.....x.xx.....:..x.:......:.:...........x..:x..x..............x.....x........x..x..:..........----:.x.:...:.... 131M4D13M 117/144 81.2% 144/94230402 0.0% 4/144 2.8% 38933180 NA +8698 chr4 + 190214555 84772804 84772803 84773047 244 CTATCTTCTCCAAGCTCCAGAATCAACTTACCAGTGTCAAGCTTCTCTTCATTATTTATTTCCATTACTACAAATTTCTCACAAACCGCAAAGGTTGGCAAAGTAGAAGAAATAAACTGCCCAAATCTTTAAACAAAGGAAAACAAGATTATGGATT-----------TTCTTTTTCCTCTTCCCAAAACAAACAACAAAGTACAAAGAAACAAAATAC-----AAAGAATAAAAACCAAAACAGTACTTTTTTTTTTTT chr4 - 94230402 45834893 45834892 45835144 48395259 48395258 48395510 252 CTACTGTTTCTAAGTCATGCAAT-AACTTACCACTGTCAAGCTTTTCTTCATTATTTATTTCCATGACTACAAACTTCTCACAGACTGCAAATGTAGGTAAAGTGGAAGAGATGAACTGTCCAAACCTTGATATACACAAAAAGAACATCATGCATTGAGATGACAGATTAATCCTCACCTACCAATAATTCACAACTA---ACGTAAAATCAGAACACTAGTGAAAGGGCAATATACAAAA----ACTTTCTCGTATTT ...::x.:..:...::x::x...-.........x..........:....................x........:........:..:.....x..x..:.....:.....:..:.....:.....:...x.x.:.x.x:....x..x..:...x...-----------..xx.::..x:..x..x.x..:xx.....x.---..:x.:..x..:..:..-----....:::..x.xx.....----.....:.:x.x... 23M1D133M11I31M3D17M5I18M4D14M 172/236 72.9% 252/94230402 0.0% 24/236 10.2% 38937911 NA +17414 chr4 + 190214555 84774816 84774815 84775173 358 CTACCTGAGCAGATCATTGCTGCTAGGAAAACCTTGCAGTAAGAAGCTCAGGACATTACTAATAGCAGCAATAGTAGGCTGGGATAAAGACATATCTCGAAGAGTCAGGAGCAGCTTTGGGATTAACTGGAATTCTCTCATTAATTTGGCATTCTTTGAGGCTTCACTATAAGA--GAAAGAA-------GATTT----------TATACACT--GTACTATCACCTTTTCTATAGCTGAATAATTAACTACGTGGGTATTAATTAATACCTGGACTCTGTGAGCAGTTCAATAAAGTGTTCAAATAAGGAAAGATGAAGTTCATATGGTGCATGGAGCCAGACCTATAATAAATAA-AAACAGTAGTATATTTAAGGTT chr4 - 94230402 45836367 45836366 45836736 48393667 48393666 48394036 370 CTACCTGAGTAAGTCATAACTGCTGGGGAAGCCTTGAAGCAAGAAGCTCAGCACATTGCTAATTGCAGCAATAGTAGGCTGGGAGAGAGACATATCTCGAAGAGTCAAGAGCAGCCTTGGGATAAGTTGGAATTCCCTCATTAACTTCGCATTCTTTGCAGCTTCACTGAAAGAAGGAAGGAAAGGTATCAATTTAAAATTGCTGTATCCCCTACGTGTTATCTAATCTTGCAAGCCTCATTAGTAGGCTA-----GCACCAGCTCATACCTGCTCTCTGTGAGAAGTTCGATGAAGTGCTCAAATAATGACAGATGAAGTTCATAAGGTGCATGAAGCCAGACCTGAAATGCAGAATGAACAG-----TGCTTAAGGTT .........:.::....x:.....:..:..:.....x..:...........x.....:.....x....................x.:....................:.......:.......x.::........:........:..x..........x:........:x....--...:...-------:....----------...x.x..--..::....xxx.:..x:.x:x..x.x..:.x::...-----.:.::.::.x.......xx.........x.....:..:.....:........x..x..............x........:..........:x...:x.x..-:.....-----.::........ 174M2I7M7I5M10I8M2I36M5D101M1I6M5D11M 276/348 79.3% 370/94230402 0.0% 32/348 9.2% 38938449 NA +12838 chr4 + 190214555 84778461 84778460 84778661 201 CATTCATTGATTATATATTATCA--ATTATGCTTATA----TACATACTTCAAAATCACAGAGGAGGTCCTGGAAAGCAGTTGAATTTGGAATAATGGAGGTCTCATGTCCACTATCAACAGTTCCCACCAAAGAAAAAGTTAGATGGAGGATGTGGCTGTTAAGAAGGGAACGTTTCTTCTTAAGCAACATTGCCAGCAACTACAA chr4 - 94230402 45838994 45838993 45839199 48391204 48391203 48391409 206 CACTCATTAACCA-GTATCATCACCACTTTTCATGTAGCTTTACATACCTCAAAATCACAGAGCAGATCCTGGAAGGCAGTGGAATTTGGAATAATGGAGGTCTCATGCCCACTGTCAACAGTTCCCACCAAGGAAAAAGTCAGATGGAGTATGTGACTGTTCAAAAGGGATCGTTTCTTCTTTAACAGCATCGCCAGCAACTAAAA ..:.....:.::.-:...:....--.:.x.x.x.:..----.......:..............x..:........:.....x..........................:.....:.................:........:........x.....:.....x.:......x...........x.:..:...:...........x.. 13M1D9M2I12M4I166M 170/200 85.0% 206/94230402 0.0% 7/200 3.5% 38939467 NA +3405 chr4 + 190214555 84778679 84778678 84778781 103 CCTGTTGATAAATCATCATATATATTCATTACACACACACAAACACACACATACACACACAAACACACACATACACACACAAACAC-----ACACATACACACAGAAT chr4 - 94230402 33416681 33416680 33416783 60813620 60813619 60813722 103 CTTTTAGATGAATTCTTGCATGT-----TTACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACAGAAGACCTGACTACACCCCTACACAGAAT .:.x.x...:...:x.:::..:.-----....:..:x.x..:....................:x......xx.x.....x..:xx.-----....x:x:......... 23M5D58M5I17M 70/98 71.4% 103/94230402 0.0% 10/98 10.2% 51361998 NA +3005 chr4 + 190214555 84778729 84778728 84778780 52 ATACACACACAAACACACACATACACACACAAACACACACATACACACAGAA chr4 - 94230402 33416706 33416705 33416757 60813646 60813645 60813697 52 ACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACAGAA .::..:x.x..:....................:x......xx.x........ 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 51362023 NA +15569 chr4 + 190214555 84780100 84780099 84780409 310 TTACAAACCTGGTAGCCCTTGATTCTTTCCATTTCTTTGCTGGCTAGTGGGTTACTCTTGACCACACAAACCAGGGCCTTGACTGCTGCATATAACCCTTCCACATCAGAGGCCATGGCCACCAGGCCCAGGATGGCTGCAGCTCCACCAACGTACTGCAAAGTAGTGGCAACAGGCTTAGGGACAAATGTTCTTACTCCTGATTAAAAGATAGTGAAAAATAATTAAGATAAATTC----CCCATGTGAACAAGAACTGTATACATCATCTTGAAAAGTT---TTTTAATTAGCAGTGTTTTATTTTAAAAATATC chr4 - 94230402 45840209 45840208 45840520 48389883 48389882 48390194 312 TTACATACCTGATAACCTCTGATTCTTTCCATTTCCTTGCTGGCTAGTGGATTGCTCTTTACCACACAGACTAAAGCCTTCACAGCTGCATACAGTCCCTCTACATCTGATGCCATGGCCACAAGTCCCAGAATAGCAGCAGCTCCACCAATGTACTGCAGAGTAGTGGCAACAGGCTTGGGGACAAACGTTCTTACTCCTGAGT-AAAGACGGTG-AAAATAAATGAATTAAAATCAAGTCTCATAGGA--AATCACTG-GGAAATCATGTAAGCAATTTGCATTTTAACTCTGCTTGATTTATTAAAAGAATATC .....x.....:..:..::................:..............:..:.....x........:..:.::.....x..x........:.::..:..:.....x..x...........x..x.....:..:..x.............:........:..................:........:..............x.-.....::...-.......x.:.:x....x..----.:...:x..--..xx....-:x.x.....x.x::x..x..---......:.xxxxx..x......xx..:...... 205M1D10M1D20M4I9M2D8M1D20M3I33M 242/305 79.3% 312/94230402 0.0% 12/305 3.9% 38939891 NA +7932 chr4 + 190214555 84782954 84782953 84783204 251 TCCACTCACCCAAGTATCCAATCAGAGCGGCCCCAATTGTCCGTGCAGATCCATTAAGATGTCCTGCTGAATTGTGTATCAACTTCACAGGAGTGGCATTCTCATGTGAGGAAATGCCTAACT---GAAAAATAGGAAAGGAAAAGAATGTAATTATATAAGAACAGTTTCAATGTTTTGATTGGAAAAGAAACCAAACACATGAATGGTAACATATCTTTTCTCTCCTCCCTTATCAGAATACTGAAAAACGA chr4 - 94230402 45840818 45840817 45841050 48389353 48389352 48389585 233 TCAACTCACCCAAATATCCTATCAAAGCTGCACCAATGGAGCGTGCGGGTCCATTCAAGTGCCCTGCTGAGTTATGTAGCAGCTTCACAGGTGTGGCATTTTCATGAGAAGAAATTGCAAGCTTTAGAAAATGAGGGAAGAAAAAAAAGAGGATC-----AGAAGGGTTTAACCTTTTCTAC-----AGAAGTCTGAACATA-----------ACCTCTGTATTTTCCTCCTGCGATAGAGTAATACAAAACAA ..x..........:.....x....:...x..x.....x.xx.....:.:......x.::..:........:..:....x..:.........x........:.....x..:.....xx.x.:..---.....xx...:...:....:..x:x:..:-----....x:....x.x:x...:x.:-----.::.:x.::....:.-----------.:x...x.x:.:......:x::x:...:..x.:x.....:. 123M3I29M5D22M5D15M11D41M 160/230 69.6% 233/94230402 0.0% 24/230 10.4% 38942136 NA +3562 chr4 + 190214555 84784820 84784819 84784919 100 AAGAGGCAAACTCCATCT-CAAAAAAAAAAAGTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964784 14964783 14964884 79265519 79265518 79265619 101 AAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.......x.x...:.-:.x.:.::x:xx...x.:.::x....:.x.:::.:.::.:.::.:...:........xx........::............. 18M1I82M 65/100 65.0% 101/94230402 0.0% 1/100 1.0% 69820036 NA +3102 chr4 + 190214555 84784833 84784832 84784908 76 CATCTCAAAAAAAAAAAGTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACA chr4 - 94230402 15682747 15682746 15682822 78547581 78547580 78547656 76 CAACTTAAAAAAAAAAAAGTCTTATGTGGATGAATATGTACTTACACATACATACATTTACACCCTCACAAGCATA ..x..:...........:xx:x.....:x..:x....:..:x..:.:...:...:..x.....x.x....x:..:. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 69102086 NA +3528 chr4 + 190214555 84784836 84784835 84784920 85 CTCAAAAAAAAAAAGTGTATATGTATA-------------------TATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 14964780 14964779 14964883 79265520 79265519 79265623 104 CTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ........::x......:..x.:....-------------------...:.x.:::.:.::.:.::.:...:....:...xx........::............ 27M19I58M 61/85 71.8% 104/94230402 0.0% 19/85 22.4% 69820056 NA +3335 chr4 + 190214555 84784850 84784849 84784912 63 GTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395800 8395799 8395862 85834541 85834540 85834603 63 GTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...x::..:...x..:....:...::x..:..xx...:...............x..... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 76389050 NA +3629 chr4 + 190214555 84784850 84784849 84784933 84 GTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATACACACCTTGAA chr4 - 94230402 8395798 8395797 8395881 85834522 85834521 85834605 84 GTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAA ....::..:x.:..:...x..:....:...::x..:..xx...................x.....x.::x...x.x.x.:::.. 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 76389052 NA +3729 chr4 + 190214555 84784850 84784849 84784926 77 GTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATACACA chr4 - 94230402 8395794 8395793 8395870 85834533 85834532 85834609 77 GTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:..:...x.:..:...x..:....:...::x..:..xx.:.................x.....x..:x.:. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 76389056 NA +3846 chr4 + 190214555 84784850 84784849 84784920 71 GTGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395792 8395791 8395862 85834541 85834540 85834611 71 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ......:...::...x.:..:...x..:....:...::x..:.:xx.:.................x..... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 76389058 NA +3364 chr4 + 190214555 84784851 84784850 84784916 66 TGTATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395797 8395796 8395862 85834541 85834540 85834606 66 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:::..x.:..:...x..:....:...::x..:..xx.:.................x..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 76389054 NA +3105 chr4 + 190214555 84784854 84784853 84784913 60 ATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......x.:::.:.::.:.::.:...:......:.xx:.......::............. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 69820029 NA +3622 chr4 + 190214555 84784854 84784853 84784927 74 ATATGTATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACATACACAC chr4 - 94230402 8395788 8395787 8395861 85834542 85834541 85834615 74 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..:...:...:.:.::...x.:..:...x..:....:..::.x:...:xx.:...............:.x.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 76389066 NA +3003 chr4 + 190214555 84784859 84784858 84784917 59 TATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.x.:::.:.::.:.::.:...:......:.xx........::............. 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 69820033 NA +9683 chr4 + 190214555 84785965 84785964 84786177 213 ATCATTCTGCTTACCTGCTTAGCAATGGCTTTGCTATCCAATTTGTTATACACTTTCCGGATTCTTGCCACTGTTAGAGACGACACAGAGAGTGCATAGAGGCCAAATGACACTTTCTCCTCTGGTACTAATGACACAGGGGATGGCACCACCCCTTCGGATTTTGCATCTTTACCTTCA---------AAAGAAGAATAA----------TTCTTTTCAAAATCATCAGTA chr4 - 94230402 45841519 45841518 45841750 48388653 48388652 48388884 232 ATCTTCCAATGTACCTGCTTGGCAATTGCTTTACTATCCAATTTGTTGTAAACCTTTCTTATTTTTGCCACTGTAAAAGAAGAAACTGAGAGTGCATAGAGACCAAAGGAGACCTTCTCTTCTGGTACTAACGATACTGGACATGGGTTGTTTCCTTCACACTTGGAATCTTTGCCTAAAAACACAATGAAAAAAGAAAAAAGCATTGGTCTTCTCTTCAGTATTAACAGTA ...x.:.x::x.........:.....x.....:..............:..x..:..:.xx...:..........x.:...x..x..x..............:.....x..x..:.....:...........:..:..x..:x....xx:xx::.....:x.:..x.x......:...xx.---------...:.....x..----------....:....:x..:.x..... 180M9I12M10I21M 160/213 75.1% 232/94230402 0.0% 19/213 8.9% 38944446 NA +14810 chr4 + 190214555 84787474 84787473 84787733 260 TTACTCACATGGCATACATACAGCCTGAAAGCTTCCAACATAATTTGGTCCAAGTTCATAAATGGTAGTAACATTTGAAGAAGGTAAAACTTCTTCTAGAAAATGTGTGGGTCCCAGGCGCCAAACCAATGAGGCAATTTGGCGTTGGGCAGGTGGAGTACCAATGTAGGCATAGACCGTGCTCACCACTGGTGGATTTGCCGAACCTGAACCCCCTGGAGTACTGTGGACATAATGAAGCTGTAAGGAAGACAAAAGCA chr4 - 94230402 45844295 45844294 45844554 48385849 48385848 48386108 260 TTACTTACATGGTACATATACTGCTTGAAAGCTTCCAACATAATTTGGTCCCAGCTCATAAATGGTGCTAACTCCTGGGGCAGGCAGAACTTCCTCCAGGAAATGTGTAGGGCCCAAGCGCCACACCAAGGATGAGAGCTGGCGCTGTGCAGGAGGTGTGCCGATATAGGCATAGACAGTGCTGACTACAGGAGGATTGGCAGAACCAGAGCCACTGGGACTGCTATGAATATAGTGAAGCTGTAAGGGAGAAAAGTACA .....:......:.:.:....x..:..........................x..:...........:x....x::..::.x...:.:......:..:..:........:..x....:......x.....x..x.x:.x:.....:..x.....x..x..:..:..:...........x.....x..:..x..x.....x..x.....x..:..x.:x...x.:..:..:.:...:.............:...x..:x:.. 260M 199/260 76.5% 260/94230402 0.0% 0/260 0.0% 38943179 NA +13427 chr4 + 190214555 84789641 84789640 84789919 279 ACACACACACACACACACACACACACACACCCCCCAAACTACTACCTTATAAAACAGGT-------AGATTTACAAGTGCACATACACTTACCTTTACAGTGTTAACAAGCTGTCCATCAATATAAAGGGCTGCAGTACTGTTTTTCAACATGCCTTTGCTCATTACCAGGACCAAATGATGCCACTGTCCCTCAATGATAAGCTCTCCACATCGAAAGCGAGCACAGCATGGGAGAATTTCATAAAATGAGGACTCTTCACTAAAATCATCAACTGAAATAAAGG chr4 - 94230402 45845108 45845107 45845373 48385030 48385029 48385295 266 ATGCACGTACACACACAGAGAGAAAAAGATCACTCCAATCA-------ATAAAAGCGATTATTTCAAGATTTAT-------------TTTACCTTAACAGTGTTAACAAGCTGTCCATCAAGGTACAGCGCTGCTGTACTATTCTTCAGCATGCCTTTACTCATGACCAGAACCAGGTGATGCCACTGGCCTTCCGCAATGAGCTCACCACAGCGAAAACGGGCACAACAAGGAAGAATTTCATAAAACGATGACTCTTCACTGAAATCATCAACTAAAAGGAAAG .::...::.........x.x.x.x.x.x.:.x.:.x..::.-------......xx.:.-------.......:-------------:.......x.........................x:..x..x.....x.....:..:....:.........:.....x.....:....::...........x..:..x:::..:.....x.....x.....:..:.....:..x..:..............:..x...........:............:...x:..:. 41M7D11M7I8M13D199M 203/259 78.4% 266/94230402 0.0% 27/259 10.4% 38944533 NA +15332 chr4 + 190214555 84794507 84794506 84794764 258 AAAAATACTGACCATAATTTTGGAGGAGTTCCTCTTTGGTGGAAACAATCAGAGATCGGTCTTTTGCTGATAGAACTATTGCAAGGCACACGTAATGTTGCTCAGAAGAATTTGCTCGGCGCACAACAGTAAGAAGTCTGACAGGGTGGTTATTTGGAGGAGAACTAAAATGTTCAATACAAAACCAGCTAGAGTAACTTAAGCCGGAGGGAGGAGGGAAGAATCTTTCACCTACAGTAAAAATTAAAAAAAAAAGTC chr4 - 94230402 45848006 45848005 45848258 48382145 48382144 48382397 253 AACAACTCTTACCATAATTTTGAAGTAATTCTTCTTTAGTTGAAACAATTAGCGACCGGTCTTTTGCTGAGAGGACAATGGCAAGGCACACATAGTGCTGCTCCGAGGAGTTTGCGCGCCGCACTACAGTAAGAAGTCTGACAGGATGGTTATTAGGAGGAGTACTAAAATGTTCAATGCAAAACCAAGTTGAGTAGCTTAAACCAGATGGTGGTGGGAAAAATCGTTCACC-----TAAGAACAAAAAGGAGAACTC ..x..:x..x............:..x.:...:.....:..x........:..x..:..............x..:..x..x...........:..:..:.....x..:..:.....x..x.....x....................:........x.......x...............:........:x.x.....:.....:..:..x..x..x.....:....x......-----...:..:x....::.:..x.. 232M5D21M 205/253 81.0% 253/94230402 0.0% 5/253 2.0% 38946501 NA +7752 chr4 + 190214555 84794872 84794871 84795000 129 TACTTACCAGAACCAATGCCACTGACCACAGCCCCATCAATAAGACCTGTTGTGACGGTATTATTTGTAGGAGCATTATGAGGGGCCAAACTGGGCAAAAAAAGACATCTATTAAAGAAAAGA-CAACAT chr4 - 94230402 45849257 45849256 45849386 48381017 48381016 48381146 130 TACTTACCAGTTCCAATTCCACTGACAACCGCCCCATCAATAAGTCCTGTCGTGACAGCATTATTGGTGGGTGCATTGTGGGGAGCCAAACTTGGCAAGAACAGACAGCTGTTAAACAGAAAATCAGCAT ..........xx.....x........x..x..............x.....:.....:.:......x..:..x.....:..:..:........x.....:..x.....x..:.....x.:..:.-..:... 123M1I6M 105/129 81.4% 130/94230402 0.0% 1/129 0.8% 38945615 NA +15025 chr4 + 190214555 84796516 84796515 84796800 285 CTTACCCAAACCCTTCAAGTGATGTGTCAAATTCAACAAAAGCTGGAGTAACTGATGACCCATGAAGTCTGATGTCATGTGGGGTTGTCATGGAGACCAGACACTTCACCCTGGTCAGGGGTACAGTACTTCCTTCCGCAGATTTTACCAGGCTCTTGCTTATCCGGTAATGGTTATCTTCATGTAAGCTAAAAACATTATCAGTACCCAGACCTTCCAGAGATGTGATCATACTACCTGTAAGTCAAGGAAATCTCTTGGGAAAATGTCATATGGAATTTCAAA chr4 - 94230402 45851209 45851208 45851483 48378920 48378919 48379194 275 CTTACCCGAACCCTTCAAGAGATGTGTCAAATTCGATGAAGGCAGGAGTGACTGATGAGCCGTGAAGCCTGATATCATGGGGTGTTGTCATGGACACCAAGCACTTCACTCGCGTCAGGGGGACTGTGCTTCCTTCAGCTGGTTTGAGCAGGCTCCTACTGATCCGGTAGTGGCTATCTTCATGCAAACTGAAGACGCTGTCTGAACCCAGACCTTCCATTGAGGTAACCATGCTATCTGCAGT---AAGAAATC-------AATACACAATACAGTATTGCAAA .......:...........x..............:.::..:..x.....:........x..:.....:.....:.....x..x...........x....::........:.xx........x..x..:........x..x.:...x.x.......:.:..x........:...:..........:..:..:..:..::.:..x.x..............xx..x..:.:...:...:...:.:x---.:......-------..x.:::x...::.x...x.... 244M3D8M7D23M 213/275 77.5% 275/94230402 0.0% 10/275 3.6% 38945307 NA +9165 chr4 + 190214555 84797979 84797978 84798132 154 GGAATTTCAAAACTTACTTCTCATTTCTGGTTCATAACTCAGTGAACTTGGTTTGTGGACCCTATATTGTTTTAGCAGTTTTTTGTCCCAGGCACCACAATTTAAAGGACTTGCCAAACGTAAAAACTCCCTAAGAAAGA-GACAAAGCAAAGTT chr4 - 94230402 45854012 45854011 45854166 48376237 48376236 48376391 155 GGTACCTCAGCACTTACTTCTCATTTCTGGTTCAAAACTCAATGAGCTCGGTTTGTGCACGCGGTACTGCTTCAACAGCCTTTTGTCCCAAGCTCCGCAATTCAGAGGATTTCCCAAGCGTAAAAATTCCCTAGGAAAGAGGACAAAAAAGAATT ..x.::...:x.......................x......:...:..:........x..x.x:..:..:..:.:...::..........:..x..:.....:.:....:..x....:........:......:......-......:x.:.:.. 140M1I14M 121/154 78.6% 155/94230402 0.0% 1/154 0.6% 38943967 NA +14579 chr4 + 190214555 84801645 84801644 84801881 237 CTTACCTCAACACCATGGGTTCCAGAGCCTGAGAGGCTAATCGTTCAAACATCCGCTGCAGGGGCGGGTGCAGTGAGTGGTCCTCATCAGCCAATGCAGCACTGCACCTCTGCAGCAGTCGTGCATGAAGACCAGCTTCACACATGACTTGCTGGTTCCTTTCTGTGTGCACCAGGGATTGTAAAATATTTGCCACGGCAAGTTGAAGATCCAAAGCATGCTAAAATCAACAAAGAA chr4 - 94230402 45855986 45855985 45856222 48374181 48374180 48374417 237 CTGACCTGAGCACCATGGGCTGCAGTGCCTGGGAGGCCAGCCTTTCAAACATCCTCTGGAGTGGGGGATGCAGCGAATGGTCCTCATCAGCCAGAGCAGCACTGCATCTCTGGAGAAGGCGTGCGTGGAGCCCAGCTTCGCACATGACTTGCTGGTTCCTCTCCGTATGCACAAGGGACTGCAGGATGTTGGCCACTGCCAGTTGGAGGTCCAGTGCATGCTGAAAAGAAAGAAGAA ..x....x.:.........:.x...x.....:.....:.::.x...........x...x..x..x..:.....:..:................:x...........:.....x..x..x.....:..:..x........:....................:..:..:.....x.....:..:.::..:..x.....x..x.....:..:....:x.......:...xx..x:..... 237M 188/237 79.3% 237/94230402 0.0% 0/237 0.0% 38945659 NA +11892 chr4 + 190214555 84803235 84803234 84803482 248 CATCCTTTCATTCATTTCATTACAGACGGGAAGGAACTAACATATTCAAGCTTACTTCTGGCTGTGTCACTGACCCAACAGAGGCCAGTAGGTCCAGCATGGCAAGCATGGCTCCAGGATGAATGATGACTGCATCAGAACTCTGCAGAGATGAAGTTGTCACATGTAGTTTCAGGTCGGCAACATTTTTAGGAGGGTAAACAGGGGGAGTTGAAACAGAATGATATGCATGCCTATAAAAAAAGAAA chr4 - 94230402 45856539 45856538 45856786 48373617 48373616 48373864 248 CATCCTTCTATCCAGTCACTCCCAAAGCAGAAGACAACAGGGTTGTTTTGCTCACCTCTGGGTGTGTAGTTGATCCAACAGAGGCCAGAAGATCCAGCATCGCAAGCATAGCACCAGGGTGAATAACAACCGCATCAGAGCTTTGCATGGATGTAGATCCCGTTTGCAGTTTCACATCAGGTATGTTTTTCTGAGGGCAAACAGGAGGTGTTGAAACAGAATGATATGCATGCCTGCAGGGAAAAAAA .......::..:..x.:xx.:x..:.xx:....:x.x:.:x:.xx.:xx...:..:.....x.....x::...:..............x..:........x........:..x.....:.....:.::..:........:..:....x:....x..x.x:.::x..:.......x:..:.xx.::.....xx.....:.......:..x..........................::.:::...:... 248M 176/248 71.0% 248/94230402 0.0% 0/248 0.0% 38946696 NA +11791 chr4 + 190214555 84808224 84808223 84808497 274 ACAAAAAAAAACTGAAATCACA-AAACACAATCAACATGTTAACATAAATAAGCACAGAAAAA-------AAGGAACCCCACACAAATAGAGACTGACTTCTCTTATA-TGATCAGTACCTTTTCCTGGACAAAGCTGGTGTACCCCAAGGAGAGGGGAGAGAAGACTCACTTGTCAGGCAAGGAGGGATCTGTTCTGCACGACTACAGACAACAAAACAGACA-GGGTGGTTTAGAGAGGTTAGAAGAAGAGAACACCAGGTTGGCAGTTGGTTAGTTTCACA chr4 - 94230402 45859384 45859383 45859656 48370747 48370746 48371019 273 ACAAGCAGAAACGGACACCTCACAAATAGTAGCAACCTGAGAGAA-AAATGAGAATGAAGAAACAACAGTGAGAAACCAGAAGCAA-----GATGAACTTCTCTTAAAAGGATCGGTACCTTTTCCTCGACAAAGCTGGCGTACCCCAGGGAGAGGGGAGAGAGGTCTCATTTGTCAGGCAAGGAGGGATCTGTTCTGCACGACTACAG---ACAAAACAGACAGGGGTAGGACAGAGAGGTTAG-AGAAGAAACCA-GAGGTCGAAAGCTTGTTAGTTTTACA ....:x.:....x..x.:.x..-...:.xx.x....x..xx.:x.-....:..x.:::.:...-------:..:....xx.x:...-----..:x:..........x.-x....:............x...........:........:..............:.x....:......................................---............-....:.xx:...........-......:.x..-x....:.:x..:.x........:... 22M1I22M1D17M7I16M5D17M1I100M3D12M1I20M1D11M1D26M 210/263 79.8% 273/94230402 0.0% 21/263 8.0% 38948840 NA +35147 chr4 + 190214555 84809872 84809871 84810409 538 AGAGCAGAGC-CATACCTGTCAAAAGAATCTGTGGCTACTTTGTAAAGATAAATAAAAAGTTTACTGCAGTGCCGTAACGTGGGTGACACTGATTCTATTGAGATTACATCTTCCTCTAAAAGTCTTTGAAATGGCTGTGTATTTGAGGGGAAGACATTCATGGCGCTTATTTTTCTTAGGTCTGAGAAGCAGCCAAGAAATCGAACAGCATCTGCCAACTTCTCATACTGAATCTCTGTTTTGAAGAAATGAGAGTTGGCTGGCTCATAGCGCATTGCTGCAGTCAACGTGCAGAACACAGTGTGAAGAAGTTCAAACACTTGATTCTGGTTCACTTTCTCCCAGCCATTCTTGGGTGGACAGCTCAAAGATCTTTCCATAGCAACGAGCAAGGATGTAATGTACACAAATCCTCCAACTTTCCTAAAAACTGTTCTTGAACGATGGCTTTCTCGAAGGACCGACAGGAGGGCCTACAGGAGACAAAAGAAAAAACAAATGAAAATACACATAATTCAAAAAAAAAAAAAAACCACTA chr4 - 94230402 45861170 45861169 45861693 48368710 48368709 48369233 524 AGAACAGAGTTCATACCTGTCAAAAGAATCTGTTGCTACCTTGTAGAGGTAAATAAAAAGTTTGCTGCAATGTCTTAGCGTAGGTGACACAGAATCGAGAGCGATTAGGTCATCCTCCAACAGTCTTTGAAATAATTGTGTATTTGAAGGAAAGACATTCAATGGACTTATTTTTCTTGAGTCTGAGAAGCAGCCAAGCAATCGAACAGCATCTGCCAGTTTTTCATACTGGATCTCTGTTTTGAAGAAATGAGAGTTGGCTGGCTCATAGCGCATTGCTGCAGTCAGCGTGCAGAACACCGTGTGAAGCAGTTCAAACACTTGATTCTGGTTTACTTTCTCCCAGCCATTCTTCGGTGGCGAGCACAAAGATCTTTCCATAGCAACGAGCAAAGATGTGACATACACAAATCCACCAACTTTTCTAAAAACAGTTCTGGTGCGATGGCTTTCTCTTAGCACTGACAGGAGGGCCTACC-GACACAACAAATAATCAAAATGAA--------------GAAGAAAATAGAACACCATTA ...:.....:-......................x.....:.....:..:..............:.....:..:.x..:...:........x..x..x.xx.x.....x:..x.....:..x............:::...........:..:..........xx.x:............::..................x...................::..:........:.......................................................:............x........x.......................:....................x.....xx...x...........................:.....:.::...........x........:........x.....x.x:.............xx..x..:...............x-..x....x.:.x..xxx.......--------------:..:....x.:..x....:.. 10M1I468M1D24M14D21M 448/523 85.7% 524/94230402 0.0% 16/523 3.1% 38948702 NA +11868 chr4 + 190214555 84817386 84817385 84817587 202 ACTTACCCTTAAAATATCAGTCTTCAACTGCAATTCCGTCGGTGGGGCTGAATGCATTAGCCCCAGGAGAGTGCCCATGTCATCGTCCCCATTTGGGGAGAGCACCAGCTGTTGGATAGTCATCAAGGCATGCTGCCGGCATTGAGGGTACTTTACTATATTATGTGCACATCTTGCACCTCCAAATTCTCGAAAAATTCCT chr4 - 94230402 45863386 45863385 45863587 48366816 48366815 48367017 202 ATTTACCCTTAAGATGTCTGTTTTCAGCTGCAGTTCTGTAGGTGGAGCGGAGTGCATCAGTCCCAGCAAAGTGCCCATATCATCTTCCCCGCTAGGTGATAACACCAACTGCTGGATGATCATCAGCGCGTGCTGTCGGCACTGCGGATACTTCACAATGTTGTGCACGCATCTCGCACCGCCAAACTCCCTGAAAATACCT .:..........:..:..x..:....:.....:...:..x.....:..x..:.....:..:.....x.:.........:.....x.....::.x..x..x.:.....:...:.....::......:x..:.....:.....:..x..:.....:..x..:..:..::.:.....:.....x.....:..:.x:.....x... 202M 153/202 75.7% 202/94230402 0.0% 0/202 0.0% 38954000 NA +8944 chr4 + 190214555 84820061 84820060 84820278 218 TTTGCTTGCAGCTTTTTAAATTACCTGCATTTGTGTTTGATCCTTGAAGAAGCACTGTCAAGGTCTCCATAACCAATAAAGCCAGGTGTTTTTGGTCTTCAACTGAACTATTATTTCTTGAGTCCCCTAAAAAAAGGTTCAAAGGT-----CCAAATTACAAAAGTGATAAGCTTATTTT------------TTCTTGATTCCGTTTTACTGTAA------TAATTTCTTTATTTCTTCAG chr4 - 94230402 45868047 45868046 45868281 48362122 48362121 48362356 235 TTTGCCAGTGGTCTTTCTACTTACCTGCATTTGTGTTTGAGCCTTGTAGTAGAACTGTCAGGGTCTCCATAACCAACAAAGCCAACTGCTTTTGGTCCTCAAATGAAC---TGTTTCTTGAATCCCCTAAAAATAATTGCAGAAGTAGAGACAGAATAAAAAATAAAATGAAATCACTCTTTGCTAAGATGCTTCTTGATT---TTTTCCACCAACGCTTTCAATTTCTTTATTTCCCCGG .....:x.::.::...:x.x....................x.....x..x..x.......:...............:.......:x..:........:....x.....---.:........:...........x.:x.x..:.:..-----.x:...x.x...x:x:..:.:x.:.:.:.------------.........---....x.xx:..------:..............::.:. 108M3D35M5I29M12I9M3D11M6I20M 162/212 76.4% 235/94230402 0.0% 29/212 13.7% 38952014 NA +34387 chr4 + 190214555 84821059 84821058 84821643 585 AATAAAATTACAGACAATACTTTACCTTGTTCATTTAGTGCCTGAGTTGGATCCTTCAACAGGGCAGCATATTTATGCAAAAGGTTTACCATGACCTCCAAAAGGCCAACCTCCCTGAACACGTCTTTAAATATGTAGTCATGTCTTGTAAACTTAAGAAGTGTTTTCATTGCAATAATGCTACAGTGATAAGAAGAGCTAGATTTTAAGAGGATACTGACACTAATAAGTTCTTTACAAGGTATATAATTTAAGCTAAAAACAACAAACTCCAGCATCTCAAAGTATTTGTTTTGTACTTCTGGGAGTTTAGAAATCTTCTCTGCAAACTGTGACAATGTGTGCTGTGACTCTAGGATGAAGTAATTGGCATTGTCAGCCATGTAAATATTTGTGATAGCATCAAGGATGATTTGGGCAAGGAAGCTGGTTTTTGCTTTTAAAAATGCATTCTGAAGAACTGCAAAGGCCTGGACGTTTCTCACACTGTGACCTAGAACAGAAAAGAAA----------AACATAAAAGTAGGTACTATGTGATATTTTAATGATGGCAA--ACTAGTCTGTTTAAACACATCATGAATTATAACA chr4 - 94230402 45869458 45869457 45870047 48360356 48360355 48360945 590 AGTAAAATGGAAGACCACACACTACCTTGATCATTCAAAGCCTGAGTGGGATCTTTCAGAAGGGCTGCATATTTATGAAGAAGATTTACCATCACCTCCAAAAGCCCCACCTCCCTGAAGACATCCTTAAAGATGTAGTCGTGACGGGTGAATTTCAGGAGCGTCTTCATGGCAATGATGCTACAGTGATAAGAAGTGCTGGATTTTAAAAGGATGCTCACACTGATCAGTTCTTTACAGGGTATGTAATTCAAGCTGAAGACAACAAATTCCAGCATCTCAAAGTATTTGGTCTGCACTTCTGGAAGTTTAGAAATTTTCTCTGCAAACTGAGACAATGTGTGCTGTGATTCCAAAATGAAGTAATTGGCATTGTCCGCCATGTAAATATTCGTGATGGCATCAAGGATAATTTGTGCTAGATAGCTAGTTTTTGCTTTCAAAAATGCATTCTGAAGGACGGAAAACGCTTGGATATTCCTCACGCTGTGACCTAAATTAGGAAACAAAGTGGGATGGGAAGAAAAAAGTGAAAGTTCTTGATTGTCTCAATGAGTACACTTACTAAT-------AACATTCCATGCATTCTAATA .:......x:x....x.:..x:.......x.....:.:x........x.....:....:x.....x...........x.:...:........x...........x..x...........x..:..:.....x........:..x.xx..:..:..x..:..:..:.....x.....:...................x...:........:.....:..x.....:..x...........:.....:.....:.....:..:........:.....................x.:..:........:...........:..............x.................:..:.::....................x..............:.....:...........:.....x..x..:x....:...........:.................:..x.x...x..:....::..:.....:..........:.x:..:...x...----------..x.x......:::x::.x.xx:x.:.:.:.....xx:..x--....:.-------....:x:....x...x...:. 510M10I41M2I6M7D21M 465/578 80.4% 590/94230402 0.0% 19/578 3.3% 38951601 NA +13345 chr4 + 190214555 84826793 84826792 84826989 197 GAAGGGAAAAAACAAGACTCACCTTTGCCTGCAGGCTGAGGTACTGCAAATCCAGGCAATAAAAAGGGTGCCCCTGTGGTAATACCAGCTGGTTTTAGTTCACTGACACCATATGTTGTTAGGGAAGTTATCAGATTAACCAGATCTTTCAAGGCATCTTTGGATTCTGCCTCTTTTGCTTGTTCCAATCTAGAAAA chr4 - 94230402 45872744 45872743 45872937 48357466 48357465 48357659 194 GGAGGGAAAAAATG---CTCACCTTTGCCTGCAGGCTGTGGCACTGCAAATCCAGGTAGTAGGAAAGGTACCCCTGTGGTAACACCAGCTGGTTTCAATTCATTTACACCATATGTTGTTAAGGACGTAATCAAATTAACCAAGTCCTTCAAAGCATCCTTCGATTCAGCCTCTTTTGCCTGTTCTAATCTAAAGGA .:..........::---.....................x..:..............:.:..::..:...:............:............:.:....:.x................:...x..x....:........::..:.....:.....:..x.....x...........:.....:......:.::. 14M3D180M 162/194 83.5% 194/94230402 0.0% 3/194 1.5% 38954049 NA +14565 chr4 + 190214555 84829001 84829000 84829279 279 TACCTAAGCAAGAGATCACAAAGAAAATTATATCCTTGCCATATCCGAAAATCATCCAGAAGTGTTTGGGAAACATCGCTGGAATCTTTGAGGAAACAAGAAAGCCCAGCAAACATTTCGACAATTTCTAGGGGAGACAGGTCATCTGATTGCTGCATATTCTGAACACATGTAGATAAACACTCTTTCTCTGTAAGAATAGATAATTAAATAAATATGCATTATTCCTGACAATCGCTTAAAAATTTTTTAATTGTTAACTGTTGTTTAATGAAACAT chr4 - 94230402 45875674 45875673 45875939 48354464 48354463 48354729 266 TACCTGAGGAGGAGATCGCAGAGGAAGTTGTATCCTTGCCATATCCTAAAATCATCCAGTAGTGTTTGTGATACATCACTGGAATCTTTGAGAAAACAGGAAAGCCCAGCAAACATCTCAACTATTTCAAGGGGAGAAAGGTCATCAGACTGCTGCATGTTCTGAACACACGTGGACAAACATTCTTTTTCTGGAAAGA-----ATTTTAAGAAATTTAGGATTTTACTGATGTT--------AATCATTGAAATGAGAACAGTTTCTAAATGAAACGT .....:..x.:......:..:..:..:..:................x............x........x..x.....:..............:.....:.................:..:..x.....x........x........x..:........:...........:..:..:.....:.....:....x..::.-----.x..x..x....x.:x:x.x..x....::x.--------...:x..x..x..xx...x...x:.x........:. 199M5D31M8D36M 211/266 79.3% 266/94230402 0.0% 13/266 4.9% 38953327 NA +15889 chr4 + 190214555 84831399 84831398 84831611 213 AAAGAGATATTCACCATGAATATACTTCACTACATTGACACTAAGACCATGACGAGATATGGTCATGAGGACTTCTCCAGCACTCTTTCTCCAAGGCAGGTTATAGGGAGGGCACCAAGAGGTTATTGCACTGAATAGAAGCTGGAGATCATCTTTCTGAGCCAGCTCCTCCGCAGGGGAAACAAAACTGCACAGTTTCACTAAGATCTAAAA chr4 - 94230402 45878348 45878347 45878560 48351843 48351842 48352055 213 AGAAAGACACATACCGTGAATGTATTTCACTACATTGACACTAAGGCCGTGACGCGATATGGTCATCAGTACTTCCCCTGCACTCTTCCTCCAAGGCAGATTATAGGGAGGGCACCATGACGTTATTGCACTGAATAAAAGCTGCAGATCATCCTTTTGAGCCAGTTCCTCCGCAGGGGACACAAAACTGCACAGTTTTACTAAGATCTGAAA .:.:...:.:x:...:.....:..:....................:..:.....x...........x..x.....:..x........:...........:.................x..x................:......x........:..:........:..............x.................:..........:... 213M 185/213 86.9% 213/94230402 0.0% 0/213 0.0% 38953051 NA +14319 chr4 + 190214555 84836918 84836917 84837140 223 ACCTTTCATACCTGTACAAAAACTTTCTGGAGTAGTCCTCGACGTTCTGCTAGAGGTAGCTCATTCTGTGCACCTCCAACTGCCTCAGGCACATGTGGAAGGTCAAAAAACAGATATAAACATTTAACCAGGGTGGAAGGCACTGACATTGTTGTCATGCAGTCCACGGTTTTCTGGAAAACAAGCCAATAAATAAGTGAATAGATAGACACAACTATAATTG chr4 - 94230402 45880790 45880789 45880997 48349406 48349405 48349613 208 ACTTTTCTTACCTGTACAAAGACTTTCTGTAGTAGCGCTCGGCGCTCTGCGAGAGGTAGCTCATTCTGTGCTCCTCCAGCTACCTCAGGCACATGTGGAAGGTCAAAAAACAGATACAGACATTTAACGAGTGTGGAAGGCACTGACATTGTAGTCATGCAGTCCACAGTTTTCTGGGGAGAAAGAAAATAGA---------------ACAAAACCATAGTTG ..:....x............:........x.....:x....:..:.....x....................x......:..:..................................:.:.........x..x....................x..............:.........::.:x...xx....:.---------------...x...:...:... 193M15D15M 180/208 86.5% 208/94230402 0.0% 15/208 7.2% 38956128 NA +9141 chr4 + 190214555 84841126 84841125 84841410 285 TTATCAAACATGAAAACTAAGAACTTACCTGACCAGAGGAAGCTAACAAATTAATTGTCGTTAGAAGCATCCAGCCTCTACTGGCTTCTTCACTCTGATTAATCTCTAGGAACTGAACTATGGCCCGACTTGCAGCCTCTATAAAACCAAAGGGAAAGCCATTAAGTGGGGGAAAAGTCACATATAAAGAGGTTCTTCTTTAAAACCTAC--CAAGGAAA---------TGAAAATTTACTAAGCACATAATTATATCAGCACTATTACATATAGAAAAACTTTAAAAATAGCAAT chr4 - 94230402 45881962 45881961 45882241 48348162 48348161 48348441 280 TCATTAAGCATTGCTGTTTAAGCCTTACCTGTCCTGACGAAGCTAGTAAATTAATTGTAGTGAGCAGCATCCAACCTCTACTTGCTTCTTCACTTTGATTGATCTCCAGAAACTGGACGATGGCACGACTTGCAGCCTCTGTA-----AGGGGGACA------AGGTGAAAAGAAAGGAAAAGAAACAAAAATTCAGTTTGAAAGTCTGCAGCATGGAAAACTTTCAACAGACTGTGCACTGAGCATGAATTCAGCTCTGCAGCACTGCTTGCAGGaaa-----aaaaataataat .:..:..:...x:xx::.x.::x........x..x..x.......::...........x..x..x........:........x...........:.....:.....:..:.....:..x.....x...............:..-----.::....x.------.:...:::::....xx.x.x.x.x.:.::...xx:..x...::..:.--..x.....---------x..xx:.x:...:....::x.x.:.xx..x...x:.:.:.x.::..:...-----.......::... 143M5D9M6D47M2I8M9I50M5D12M 187/269 69.5% 280/94230402 0.0% 27/269 10.0% 38959164 NA +3143 chr4 + 190214555 84847770 84847769 84847841 72 TCCCAAAAAAAAAAAAAAACCAAAAAAAAAAACAAAAAAAAACAAAAAAAACCCCAGAAAGGTAAGAAGAAA chr4 - 94230402 78376851 78376850 78376922 15853481 15853480 15853552 72 TTCAAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAGTCAGGAATAAAGAAA .:.x............x.....x.:....x..x...x..x.........x.x.xx..xx...x.x:...... 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 6470919 NA +3048 chr4 + 190214555 84847773 84847772 84847847 75 CAAAAAAAAAAAAAAACCAAAAAAAAAAACAAAAAAAAACAAAAAAAACCCCAGAAAGGTAAGAAGAAAATGCAG chr4 - 94230402 92992739 92992738 92992813 1237590 1237589 1237664 75 CAATGAGAACAAATCACAGAAAAGAAAAACCAAAAGAAAGAAAAATAGTCCAAAACTGATTAAAAAAAAATGCAG ...x:.:..x...xx..x:....:......x....:...x.....x.::..x.:.xx.:.x.:..:......... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% -8144966 -86085436 +3040 chr4 + 190214555 84849522 84849521 84849591 70 TTTGGTTGAAATACAGAAAAGAAAACAAGCAATAGAGCAGGGTATGCTAAAAAAAAAAAAAAAAAAAAGA chr4 - 94230402 37322345 37322344 37322414 56907989 56907988 56908058 70 TTTGACTTAAATACATAACAGTAATAAGGTGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGA ....::.x.......x..x..x..xx.:.::.x...:x..xx:x...:.....:................ 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 47527177 NA +10153 chr4 + 190214555 84849897 84849896 84850081 185 AATACCTGTGGATTTGTTTGATGCTCTCCTTCGAATTTCTGTCACCATTAGTCGTGAGACTTGTGTTGTGAACTGCAGAAGATCAGAAAATTTTTCTGTCATTGTATTCGGCGGAGCATTTCCAAAAACCTGTAGATAAGAAAAGACATTGTTAATGAAGCACTGACAAATTTTTCTTTTTATTT chr4 - 94230402 45889425 45889424 45889602 48340801 48340800 48340978 178 AGTACCTGTGGATTTATTCGATGCTCTCCGTCGAATTTCAGTCACCATCAATCGTGACACTTGAGTAGTGAATTGTAGGAGATCAGAAAATTTTTCTGTCATTGTACTTGGAGGAGCATTTCCAAATACCTG-AAACAAGAAAAAAATAGGTAAAT------TTTATAAATTGCCCTATTTACCT .:.............:..:..........x.........x........:.:......x.....x..x.....:..:..:...........................:.:..x..............x.....-.:.:.......:.xxxx..x...------:.x.:.....x::..x....::. 132M1D23M6D23M 144/178 80.9% 178/94230402 0.0% 7/178 3.9% 38960472 NA +14249 chr4 + 190214555 84860405 84860404 84860602 198 GACTTACCCTGTTAAACACTGGCAGCATCATATACAGTTTCTCTTCTTGTTCCTTCTGAGTCATGTGCCGGGGAGGATGGCACAACTCCGTGAAGAGCCGGCGGAGGTGCATCAGTCCTAAGGCGTTGTCTTGTGGGCTGCACTCCTCCTGCCTCGGCCGCCCCATGATCCTCTTCACCATGTTCATCTTGGCTGGTT chr4 - 94230402 45895733 45895732 45895930 48334473 48334472 48334670 198 GGCTTACCCTGTTAAATACCGGCAGCATCATGTATAGTTTTTCCTCCTGTTCTTTCTGGGTCATGTGCCGGGGAGGGTGGCAGAGCTCTGTGAAGAGGCGCCGCAGGTGCATCAGCCCCAGCGCATTGTCCTGGGGGCTGCACTCCTCCTGCCGGGGCCGGCCCATGATCCTCTTCACCATATTCATCCTGACTGGCT .:..............:..:...........:..:.....:..:..:.....:.....:.................:.....x.:...:........x..x..x...........:..:.:x..:.....:..x...................xx.....x....................:......:..:....:. 198M 167/198 84.3% 198/94230402 0.0% 0/198 0.0% 38964672 NA +3531 chr4 + 190214555 84868186 84868185 84868268 83 AAAAAAAAAAAAAAAAAAAAAGATTTATAAGCAATTCCTGAGGTTTTCCTTTTTCTTTCTTCTTCTTAATCTTTCTGGAAAAT chr4 - 94230402 21774554 21774553 21774636 72455767 72455766 72455849 83 AAGAGTAAAAAAAAAAAAAAAGCTTTTTAAGCAACTGGTGAGGTTTTTTTTTTATTTTACAGATTTCATTTTTTCTGTACAGT ..:.:x................x...x.......:.xx.........::....x:...x:xxx.:.:.x.:......x.x.:. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 63093632 NA +3258 chr4 + 190214555 84868189 84868188 84868268 80 AAAAAAAAAAAAAAAAAAGATTTATAAGCAATTCCTGAGGTTTTCCTTTTTCTTTCTTCTTCTTAATCTTTCTGGAAAAT chr4 - 94230402 21777359 21777358 21777438 72452965 72452964 72453044 80 AAGAGTAAAAAAAAAAAAGCTTTTTAAGCAACTGGTGAGGTTTTTTTTTTATTTTACAGATTTCATTTTTTCTGTACAGT ..:.:x.............x...x.......:.xx.........::....x:...x:xxx.:.:.x.:......x.x.:. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 63090830 NA +3551 chr4 + 190214555 84885302 84885301 84885367 66 GCAAATATATACATACATACATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630140 71630139 71630205 22600198 22600197 22600263 66 GCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x::.......:...:.x..........x.x...:..::.....x..::....x:.:....... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 13255162 NA +3701 chr4 + 190214555 84885306 84885305 84885368 63 ATATATACATACATACATATACATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 49987095 49987094 49987157 44243246 44243245 44243308 63 ATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatatatatatatatata .........:.x.:...:.:...:.:..............x.....:.:.:.:.:.:.:.:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 34898211 NA +3143 chr4 + 190214555 84920462 84920461 84920532 71 TTACAAATATATACATATAAACATGCACAAAGTGAGAAAGAGTAATAAAGCATTTGGG-------ACAAATGGCTAAC chr4 - 94230402 15027238 15027237 15027315 79203088 79203087 79203165 78 TTGCAAATATACACATACACACATGCAAAGAATAAGAAAGAAAAGTACAGCAGTTAAAATACTACACAGATGTCTGAC ..:........:.....:.x.......x.:.:.:.......:x.:..x....x..:::-------...:...x..:.. 58M7I13M 52/71 73.2% 78/94230402 0.0% 7/71 9.9% 69893224 NA +3386 chr4 + 190214555 85001351 85001350 85001427 77 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTTTTTGGAGATGGAGTCTTGCTCTGTTGC chr4 - 94230402 36600615 36600614 36600690 57629713 57629712 57629788 76 TCCTTTTTTCCTCTCTCTTTCCCTTTCTT-CTTCCTTTTCATTTCTTTTTTATGGGTATTAATTTGCTCTCTGGTGC .:....:..:..:...:.:.::.......-...:......x..........x...:x..x:.x.:x:x.....x... 29M1D47M 55/76 72.4% 76/94230402 0.0% 1/76 1.3% 48400736 NA +3350 chr4 + 190214555 85028628 85028627 85028724 97 CACCATGTTCACCAGGCTGGTCTCAAACTCCTGACCTCAAGTGCTTCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCTTG chr4 - 94230402 18197117 18197116 18197206 76033197 76033196 76033286 90 CATCATGTTCTACAG-----CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:.......xx...-----:.:x..:..:...:x:.............xx.x........::...:xx.....:.:...--.:...x:....:x.. 15M5D60M2D15M 64/90 71.1% 90/94230402 0.0% 7/90 7.8% 66831511 NA +3392 chr4 + 190214555 85062883 85062882 85062941 59 TATGCATATATGCATACACACATAGACATACATATATGCATGTTATATGTGTATATTAT chr4 - 94230402 69706450 69706449 69706508 24523895 24523894 24523953 59 TATATATATATACACACACAAGTAAACATATATATATGCCTGTTGTATTTTCATGTTAT ...::......:..:.....x:..:.....:........x....:...x.x:..:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 15356433 NA +3342 chr4 + 190214555 85069000 85068999 85069045 46 TATGTATATATATAAATATATATACAGACACATATATACACACACA chr4 - 94230402 38338172 38338171 38338217 55892186 55892185 55892231 46 TATGTATGTACATAAATATGTATATAGACACAAATATACAAACACA .......:..:........:....:.......x.......x..... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 46730828 NA +3855 chr4 + 190214555 85092138 85092137 85092220 83 TCTGCAGCCTCAAACTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCTGAGTAGCTGGGATCACAGGTGTGCACCACCAT chr4 - 94230402 18197125 18197124 18197205 76033198 76033197 76033278 81 TCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ...:.....:x..:..:...........::x...x.xx:x........::::.........:.::...--:.........::. 68M2D13M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 66895013 NA +3361 chr4 + 190214555 85094332 85094331 85094416 85 TGAATTAAGAAAACAGAACCTTTTGGAGCATTTTTTTTACTAATTTTTTTACTAAAGAAAGTGTATTTGTCACTGCATTTGCTAT chr4 - 94230402 69372949 69372948 69373028 24857375 24857374 24857454 80 TGAGTTAAAAAAACATATTCTTTTCAAGCATTTATTTTTTTAATTTTGTCATTCAAGTAAA-----TTATCACTGTACTTTGTAT ...:....:......x.x:.....x:.......x....x:.......x.:.:.x...x..:-----..:......:.:..xx... 61M5D19M 59/80 73.8% 80/94230402 0.0% 5/80 6.2% 15721383 NA +16070 chr4 + 190214555 85100496 85100495 85100776 281 GGATGTGAGGGCAATCTGGCTGCAATATCTTTCGCCCCATTGATTGGCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGCAGATGTCCCCTTCTTCCCTCACCACTCCATGTGCATCCCTACCAAAGCTGTGCACTCGGTCAAAGAGGACGACCATCCCCGAGAGAGAAGG-ACTGGTCTTCAGTCAAGGGTATATGAGTAGCTATG-TCCCCTTCTAGAACCTCCAAATAAGCTCTCAAGGTCAATTTGTAGCAGAACGTAGGGTAGTCAAGCTTCCAAGAC chr4 - 94230402 69279862 69279861 69280140 24950263 24950262 24950541 279 GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACG-GTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTCAAGAAATTAA---ACATCCAAATGTATTTTAGTTACTCTAGCAGGAC ............:..........:.:....x..:..........::x................................::.:....:.....:..:......:..........:.....x..:......::.:..:....:............x.......x.....x..-..:.x..x...............:.-......::.-......x..............:......xx:.::.:..---::.x.x:..:...xxx....:.xx..xx..:... 171M1I25M1D9M1I38M3D34M 222/277 80.1% 279/94230402 0.0% 6/277 2.2% 15820634 NA +3036 chr4 + 190214555 85135640 85135639 85135714 75 GGGGAAAGGGAGGGGGAGGAAGGGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAGAGGGCCAAACTCATTTTTCA chr4 - 94230402 982278 982277 982352 93248051 93248050 93248125 75 GAGGAAGAGGAGGAGGAGGAAGGGAGACAACCAAACCCAGGCAGTGAGAAAGGTGGAGAAAAAGCTCATTTTCCA .:....::.....:.............x.:xx.:.xxx..:x..x....:..:x.::.:xx..:........:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 84153362 NA +3588 chr4 + 190214555 85141622 85141621 85141700 79 CTGCAACCTCTGCCTCCCCGGTTCAAGTGATTCTTTTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGTTGTGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.:x..........x...x:xx.x........:............:......--:....:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 66944496 NA +3270 chr4 + 190214555 85181145 85181144 85181222 78 CTGTAGTTGCCAATAGCTCTCTTTTTTTTTTTTCCAAAACTTGTTTTCTTTGTTCTAATAATGCTATTCCAGTGATTC chr4 - 94230402 65695719 65695718 65695792 28534611 28534610 28534684 74 CTTTACCTGCTAATGGCTTTTTTTTTTTTTTTTCCAAAGCATCTCTTTTTTTCTTTACTCAT----TTCCAGTAACCC ..x..x:...:...:...:.:.................:.x.x.:..:...x:.:..x.x..----.......:.::. 62M4D12M 54/74 73.0% 74/94230402 0.0% 4/74 5.4% 19485426 NA +3085 chr4 + 190214555 85351142 85351141 85351224 83 TTCTAAGTATTTTATTTTATTTTTGAAGCTATTGTAAAAGGGGTTGAGTTCTTGATTTGATTCTCAAGTTGGTCGCTGTTAAT chr4 - 94230402 30047006 30047005 30047088 64183315 64183314 64183397 83 TTATAATTATTTTATTTCATTTTTGAAGGTAGATAGAAAGATACTGAGCTTGTAATTTCATATTCCCGTTGTTTGCTTTAAAT ..x...x..........:..........x..xxxx:....:x::....:.:x.:....x..x:..xx....x.:...x.x... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 55304136 NA +3152 chr4 + 190214555 85352041 85352040 85352079 39 TGAGCTTTTTTTGTTGTTGTTGTTTGTTTATTTGTTTTT chr4 - 94230402 12234320 12234319 12234358 81996045 81996044 81996083 39 TAAGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTT .:..x........................:......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 73117721 NA +3250 chr4 + 190214555 85352050 85352049 85352114 65 TTTGTTGTTGTTGTTTGTTTATTTGTTTTTGCCTGGCAATGTTTTCTTTTTTTTCTTTTTTCTTT chr4 - 94230402 12300311 12300310 12300375 81930028 81930027 81930092 65 TTTGTTGTTGTTGTTTGTTTGTTTTGTTTTTCCAAACAGTCCTTTTTTTATATTCATTTCTATTT ....................:...xx....x..x::..:.x:...:...x.x...x...:.x... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 73051739 NA +3026 chr4 + 190214555 85397522 85397521 85397573 52 AAAAAAAAAAAGAAAGAAAATTAAAAAGTAAAAAAAAAAAAAAAGAAAGAAA chr4 - 94230402 69673929 69673928 69673980 24556423 24556422 24556474 52 AAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGA .........x:....x:....:.::..x..............:...::..:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 15723593 NA +3179 chr4 + 190214555 85397556 85397555 85397609 54 AAAAAAAAAAGAAAGAAATCTTCCTTTGCTATTTCTACATAGAAAG--ATAAAAAT chr4 - 94230402 54632355 54632354 54632410 39597993 39597992 39598048 56 AAAAAAAAAAAAAAGAAATCTTCCTGTGCTTCTTTTACAGAGGAAGCAACAGAAAT ..........:..............x....x:..:....x..:...--.:.:.... 46M2I8M 45/54 83.3% 56/94230402 0.0% 2/54 3.7% 30765201 NA +3146 chr4 + 190214555 85398124 85398123 85398184 61 ATAAAATGTTAGCTGTTCAAAAAGCAAAAAAAAAAAAAAAAAAAAAACAGAAAACTATCTC chr4 - 94230402 72217381 72217380 72217441 22012962 22012961 22013022 61 ACAAGGTTTCAGTTTCTCAAGAAGAGAAAAAAAAATAAAACAAAAAACAAAGAACTTTCTC .:..::.x.:..:.x:....:...x:.........x....x........:.:....x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 13180743 NA +3388 chr4 + 190214555 85436034 85436033 85436078 45 GTATATATACATATATATATATAGAGAGAGAGAGACAGAGAGAGA chr4 - 94230402 33398829 33398828 33398873 60831530 60831529 60831574 45 GTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..:.:......:.......:.:...................x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 52037205 NA +3351 chr4 + 190214555 85456285 85456284 85456454 170 GTCAAGGTTCCCCAAGCAGGTTGAACCAGAGCAAATGCTTTCAA-----TGATCCTTTTCACATCCTGGCTTCTCTCCTTATAAA---GAAAAAGTTATATATGTATGTGTGTGTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATA chr4 - 94230402 81401201 81401200 81401373 12829030 12829029 12829202 173 GCCAAGATTTCCCATGCTGTCTACCTTAG-GCAAATATTTTGGAAAGTTTAAAATGCTTCAAAT----ATTTCTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .:....:..:....x..x.x:.:xx::..-......::...x:.-----.:.xx:x:....x..----::....::xx:..x...---.:....:xx....x.x.:...x.....x..x.x.......:...x:x:..:..:.:x..........:.:x:...x::.:..x..:..:. 29M1D14M5I15M4D17M3I90M 103/165 62.4% 173/94230402 0.0% 13/165 7.9% 4055084 NA +3399 chr4 + 190214555 85456290 85456289 85456447 158 GGTTCCCCAAGCAGGTTGAACCAGAGCAAATGCTT------TCAATGATCCTTTTCACATCCTGGCTTCTCTCCTT----ATAAAGAAAAAG-------------------TTATATATGTATGTGTGTGTGTATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGT chr4 - 94230402 71630029 71630028 71630205 22600198 22600197 22600374 177 GGTTGCCCAGGTAAGCTGAACTA---TAAATACCTGTGAATTTAGTTAATCTTTCCA-------GGTTTTCTAATTTGGAACAAAGTAGAAGCAGATCAGGATTTTCACTATCACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ....x....:.:.:.:.....:.---:....:.:.------.:.:.x.x:....:..-------.x..:...xx..----.:....x.:...-------------------.:.:x..:..:::..::.:.::.:.:.:.x.....:....x.x.:....::.....x..::....x:......... 23M3D9M6I16M7D12M4I12M19I76M 99/148 66.9% 177/94230402 0.0% 39/148 26.4% 13826261 NA +3289 chr4 + 190214555 85456377 85456376 85456494 118 TATGTATGTGTGTGTGTATATATATATATATATA-TATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACA chr4 - 94230402 35554923 35554922 35555041 58675362 58675361 58675480 119 TATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA .....x.x.x...x.x..:.xx.x..x:....x:-..x......x..x.........::::.:.:x....:.......::.:::.x.x......:x.x..x:.x:.x.:x.....x... 34M1I84M 76/118 64.4% 119/94230402 0.0% 1/118 0.8% 49901454 NA +3289 chr4 + 190214555 85456394 85456393 85456449 56 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...:.......::.......x.....:...x::.......:......x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 65752120 NA +3144 chr4 + 190214555 85456395 85456394 85456444 50 TATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTG chr4 - 94230402 19704277 19704276 19704326 74526077 74526076 74526126 50 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x...:.......::.......x.....:...x::.........:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 65752118 NA +3036 chr4 + 190214555 85456396 85456395 85456451 56 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x...:.......::.....:.x.....:...x::.....:.......:x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 65752122 NA +4057 chr4 + 190214555 85456396 85456395 85456481 86 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATAT chr4 - 94230402 70982597 70982596 70982681 23247722 23247721 23247806 85 ATATATATATTTATTCATGTA-ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..........x...x:..:..-.:x.x.x.x:x....................:....:.x.:..x..:......:...:.:.:.. 21M1D64M 64/85 75.3% 85/94230402 0.0% 1/85 1.2% 14473799 NA +3755 chr4 + 190214555 85456426 85456425 85456520 95 GTGTGTGTGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACACACAGT chr4 - 94230402 14964794 14964793 14964887 79265516 79265515 79265609 94 GTGCATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT ...::.x.:.:.:x.x....-.:.:x.:.:.x:...:.x..:....::.:.::.:..:.....:...xx........::.............x.. 20M1D74M 63/94 67.0% 94/94230402 0.0% 1/94 1.1% 70491632 NA +3939 chr4 + 190214555 85456433 85456432 85456508 76 TGTGTGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACAT--GTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..............:...x.:..--....x..::.:.....::x..:..xx:..:...............x..... 23M2D51M 58/74 78.4% 74/94230402 0.0% 2/74 2.7% 77060644 NA +3200 chr4 + 190214555 85456436 85456435 85456532 97 GTGTATGTGTGTA-------TATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACACACAGTGATTGCTAAGCA chr4 - 94230402 14964794 14964793 14964897 79265506 79265505 79265609 104 GTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAATA ...:..x.:.:..-------.:.:x.:..:x....:.x..:..:.::.:.::.:::.:..:.:...xx........::............x..x.x:..:.::. 13M7I84M 61/97 62.9% 104/94230402 0.0% 7/97 7.2% 70491642 NA +3640 chr4 + 190214555 85456437 85456436 85456510 74 TGTATGTGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...:...:.::...x..:.:...x.:::.:.:...::x..:.:xx...................x..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 77060648 NA +4013 chr4 + 190214555 85456443 85456442 85456516 74 TGTGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....:...:.:.:.:..x.:....:.x..:....:...:.x..:.:xx.:.................x..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 77060654 NA +3771 chr4 + 190214555 85456445 85456444 85456518 74 TGTATATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:...:.::.:...x.::...:.x..:....:..:.:x....:xx.:.................x..... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 77060656 NA +3229 chr4 + 190214555 85456450 85456449 85456505 56 ATATATACGTATATATGTGTGTATATATATATACGTATACACACACACACACACAC chr4 - 94230402 25393253 25393252 25393308 68837095 68837094 68837150 56 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x.x.:..:.::......:.:...:...x.::..:.............:..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 60063197 NA +5532 chr4 + 190214555 85463594 85463593 85463835 242 ACCTACAGAATACATGTAGAATAGGGC----ATATATACAAATATG-----CATATATATACGTATGTGTATATATATGTGTATATATATACGTATGTGTATATATGTGTATATATATGTATGT-------------GTATATATATGTGTATATATATGTATGTGT----------ATATATATATGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 89611799 89611798 89612059 4618344 4618343 4618604 261 ACCTACAGGGT-----TAGACTGGAACTTCAACAGAAGCAAATATTACATTCTTTtatatacatacatatatatatatgtatatatgtat-tgtatatgtaatctaacacatatatatatatataATAGAATACGAAGCATAGATAAATCCTTATCTATCTCCGTATTATTAGTACAACATATA-ATATATA-----ATATATCTATAC-TATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAA ........::.-----....x.:.::.----.:.x.x:.......x-----.x.x.......:..::.:...........:.....:...-:....:....xx:xx::::........:...:.-------------.:...x...x:.x:x...x...x.x:..:.----------.:.....-..:...:-----:.:.:.x....:-......x.x......::...x.x..............::.......x.::.x:x:...:...:. 11M5D11M4I15M5I39M1D33M13I30M10I7M1D7M5D12M1D64M 160/229 69.9% 261/94230402 0.0% 45/229 19.7% -4148205 -90082197 +3290 chr4 + 190214555 85463708 85463707 85463813 106 TGTATATATATGTGTATATATATGTATGTGTATATATATATGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATGGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398781 33398780 33398873 60831530 60831529 60831622 93 TATACACACATGCGCACAGAC---------CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGA----GAGAGAGAGACAGAGATAGA .:..:.:.:...:.:.:.x.:---------:.....x..:.:.x.:x:x.....:....:.:....:.:.......:.:.x.----..........x.....x... 21M9D52M4D20M 65/93 69.9% 93/94230402 0.0% 13/93 14.0% 52064927 NA +3027 chr4 + 190214555 85463711 85463710 85463790 80 ATATATATGTGTATATATATGTATGTGTATATATATATGTATGTGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 40224636 40224635 40224715 54005688 54005687 54005767 80 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ...:x...:::...:..xx.x.x....:.xxx:x.:.x:.x.x...............:........x...:....:.:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 45239075 NA +3889 chr4 + 190214555 85463723 85463722 85463815 93 ATATATATGTATGTGTATATAT-ATATGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATGGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:::...:.:.:.x.:-....:x....:.x.:x:x....:::.:.:.:....:.:.......:.::............x.....x... 22M1I71M 63/93 67.7% 94/94230402 0.0% 1/93 1.1% 52064943 NA +3262 chr4 + 190214555 85463736 85463735 85463811 76 TGTATATATATATGTATGTGTGTGTGTGTGTATATATATATATATATATATATATATGGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398804 33398803 33398873 60831530 60831529 60831599 70 TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGA------GAGAGAGACAGAGATAGA .:..x..:...x.:x.x.....:...........:.:.......:.:.x.x.------........x.....x... 52M6D18M 54/70 77.1% 70/94230402 0.0% 6/70 8.6% 52064932 NA +3140 chr4 + 190214555 85463753 85463752 85463801 49 GTGTGTGTGTGTGTATATATATATATATATATATATATATGGAGAGAGA chr4 - 94230402 9151856 9151855 9151904 85078499 85078498 85078547 49 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAGGAGTGAAA ..............:........x....x.:.......xx....x..:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 76311897 NA +3071 chr4 + 190214555 85463771 85463770 85463819 49 ATATATATATATATATATATATGGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 12340919 12340918 12340967 81889436 81889435 81889484 49 ATGTACATACATAAAAATATATGGAGAGAAAGAGAGCAAAAGAGAGGGA ..:..:...:...x.x.............:......x:.:......:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 73122852 NA +3651 chr4 + 190214555 85475629 85475628 85475734 106 GGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCG chr4 - 94230402 76636388 76636387 76636491 17593912 17593911 17594015 104 GAAAAAGCGGCCGTGGGGCGTCGGGCGCAGGCAGCGGGGGGAGGGGGAGCGGGGGTGCGGGAAGCCGATTGGGTTGCGGGGAGCCGGTA--GGGCTGCGGGCTGCG .:::.:.x...:.:....x.:x...x.x:...x........x....::.x..xx.:.x...:x.xx..xx...:.......:..x..x.--..........xx... 89M2D15M 70/104 67.3% 104/94230402 0.0% 2/104 1.9% 8839241 NA +3459 chr4 + 190214555 85475649 85475648 85475741 93 CGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGG chr4 - 94230402 76636387 76636386 76636479 17593924 17593923 17594016 93 CGAAAAAGCGGCCGTGGGGCGTCGGGCGCAGGCAGCGGGGGGAGGGGGAGCGGGGGTGCGGGAAGCCGATTGGGTTGCGGGGAGCCGGTAGGG ..:::.:.x...:.:....x.:x...x.x:...x........x....::.x..xx.:.x...:x.xx..xx...:.......:..x..x.... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 8839262 NA +3349 chr4 + 190214555 85475986 85475985 85476090 105 GTTTTAATAATAAGCATATATATTTGCAAAAATATATATTTTATATGTATAAAATATGTTTTAAAATATTTATAAATATATTACATATTAGAAATATATATTATA chr4 - 94230402 68929751 68929750 68929852 25300551 25300550 25300652 102 GTATCAACATTAAGAATATATATTTATTGTTACATATACTCTATATGTATAAAAGATGTTTC---TTATTTATATGCAGAGTAAATTTCCTAACTGGATTTTGTA ..x.:..:.x....x..........::x:xx.:.....:.:.............x......:---x........x::.x.x..x..x.:xx..x.:x..x..:.. 62M3D40M 70/102 68.6% 102/94230402 0.0% 3/102 2.9% 16546235 NA +3091 chr4 + 190214555 85485360 85485359 85485502 143 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATCTCCTTGGATTTTTAAAATGTAGGCTTTCAGTAGGT-----------ATATATATTAACTGTATGTTTCAAAAGGTCCTCCTTTATTTTTTGTTTAAAT chr4 - 94230402 69437739 69437738 69437882 24792521 24792520 24792664 144 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT---TACATAAGTAATTCTGTTCTTTCTCACACTGT----TTTCAAAAAGTTCTGCTCATGAAGCAAAATTAAA---ATGTCACAAAATGTTCCTCTGCCTTCTCTGCTGATAT .........x........:x...................x.---..:...x:..x:..:x.xxx..:.:.x.x...----.....:x.:..-----------.xxx.x.....x---....:x.....x..:.::..x:x..:.:..:.x.x.. 41M3D32M4D11M11I12M3D37M 93/133 69.9% 144/94230402 0.0% 21/133 15.8% 16047621 NA +3858 chr4 + 190214555 85534928 85534927 85534987 60 AAAAAAAAAAAAAAAAAGAAAGAAAACAGAAACAAAAACAAAAACAAAACTTTCCTAAAG chr4 - 94230402 88049163 88049162 88049222 6181181 6181180 6181240 60 AAAGAAAAAAAAAAAAAGCAAGAAAATATAGACAACAACAACAACAAAATCCCCCTAAAG ...:..............x.......:.x.:....x.....x.......::::....... 60M 49/60 81.7% 60/94230402 0.0% 0/60 0.0% -2514235 -91716167 +3751 chr4 + 190214555 85570244 85570243 85570373 130 TTTTTCACCCCTTC-TCCCACTCCCTTCCCCTTCCCCTTTCCTT----ACCTTTACTTCC---CTTGCTCT-----CTCTCTCTTTCTCTTTCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTT chr4 - 94230402 9693692 9693691 9693834 84536569 84536568 84536711 143 TTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..:..x.:.:....-.....x.......:x:..x:.:..::...----..:.:x...x.:---:.....x:-----:...::..:..:.....:..:.:.:::.:x...::.x.:...x..x...:........:.....::. 14M1I29M4I12M3I8M5I67M 86/130 66.2% 143/94230402 0.0% 13/130 10.0% 75876552 NA +3674 chr4 + 190214555 85570314 85570313 85570441 128 TTTCTCTTTCTCTCTCTC-----TCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTT---------CTTTCT----------TTCTTTCTTTCTTTCTTTCTTTCCTCTCTCTCTCTCTTTTTTTTTT chr4 - 94230402 45185586 45185585 45185737 49044666 49044665 49044817 152 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTT ..x...x..:..:....:-----...:xx....:.x...:x..........::..::x...:.:x.:..::..........---------......----------....:x..x::.x.......xx..x.:.::xx......x..:.... 18M5I58M9I6M10I46M 89/128 69.5% 152/94230402 0.0% 24/128 18.8% 40384728 NA +3189 chr4 + 190214555 85570399 85570398 85570499 101 TTTCTTTCT------TTCTTTCTTTCCTCTCTCTCTCTCTTTTTTTTTTTCTGGAGAAGAGTGGT-TTAAAAGGGAGTTGAATATAACAGAGCACCTCATTATTTTCC chr4 - 94230402 49339959 49339958 49340066 44890337 44890336 44890444 108 TTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAGGTATTAATGGAAAGGGAAAAAAAAAAAATTGCTGTGTTGTTTTTC .......:.------..::.:...::..........:.:.........:::..x:...:..x...-....x:.::..xx:..x.x..x.:.x::.:x::..:....:. 9M6I50M1I42M 66/101 65.3% 108/94230402 0.0% 7/101 6.9% 36230440 NA +13071 chr4 + 190214555 85570493 85570492 85570732 240 ATTTTCCTTTCTTTTTGTTTGCTAACTAGGAAAGTCCATCAGCTTGATAATGGAGGAGAACAATGACTCCACGGAGAACCCCCAACAAGGCCAAGGGCGGCAGAATGCCATCAAGTGTGGGTGGCTGAGGAAGCAAGGAGGCTTTGTCAAGACTTGGCATACTCGCTGGTTTGTGCTCAAGGGGGATCAGCTCTATTATTTCAAAGATGAAGATGAAACCAAGCCCTTGGTGAGTAGGAG chr4 - 94230402 46581810 46581809 46582049 47648354 47648353 47648593 240 ACTTTTTTCCCTTTTCCTTTTCTGGGCAGGAGAGTTGCTCAGATCCAGTATGGATGAACACAACGGCTCTGCAGAGATGCCCTCAGTGAGCCAAGGGCGGCACGGCACCATCAAGTGTGGATGGCTGCGAAAGCAAGGGGGCTTCGTCAAGACCTGGCACACACGCTGGTTTGTCCTCAAAGGGGACCAGCTTTATTATTTTAAAGATGAAGATGAAATCAAGCCACTGGTAAGTGACAG .:...::.::.....:x...x..::x:....:...:xx....x.:x.xx.....x..:x....:.:...::.:....xx...:x.xx::.............x::::.............:......x.:........:.....:........:.....:..x...........x.....:.....:.....:........:................:......x:....:...::x.. 240M 178/240 74.2% 240/94230402 0.0% 0/240 0.0% 38988683 NA +3257 chr4 + 190214555 85590293 85590292 85590377 85 TTTCCTTCCCTTCCCTTCCTTTCCTTTTTTTCTCCCTTTCTTCTTTCCTCCTTTT----------------TATTTTTTATTTTATTTTATTTTATTTTTT chr4 - 94230402 82674377 82674376 82674476 11555927 11555926 11556026 100 TCTCCTTCCCCACCCTTTCTTCCCTTTTTTTCGCCTTCGATTTTTCCCCCTTTTTTTAAAAAAAATTGTACTATTCCCCAtttc-ttcccctttatttttt .:........:x.....:...:..........x..:.:xx..:..:..:.:....----------------....::::....:-..::x:.......... 55M16I13M1D16M 61/84 72.6% 100/94230402 0.0% 17/84 20.2% 2915916 NA +3022 chr4 + 190214555 85607395 85607394 85607447 53 AGAGAGAAAGAGAGAAAGAGAGAAAAAGAGAGAAAGAGAAAGAAAACCACAAT chr4 - 94230402 89612019 89612018 89612071 4618332 4618331 4618384 53 AGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAGCCACAAT .......:......:........x..:.x:x:.:.:.....:.x.:....... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% -4004624 -90225778 +3006 chr4 + 190214555 85608538 85608537 85608575 38 TTTTTGTTTGGTTGTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15258597 15258596 15258634 78971769 78971768 78971806 38 TTTTTGTTTGGTTGTTTTTTTTCTTTTCTTTTTTTCCT ......................:....:.......::. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 70349941 NA +3006 chr4 + 190214555 85608538 85608537 85608575 38 TTTTTGTTTGGTTGTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15253838 15253837 15253875 78976528 78976527 78976565 38 TTTTTGTTTGGTTGTTTTTTTTCTTTTCTTTTTTTCCT ......................:....:.......::. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 70354700 NA +3287 chr4 + 190214555 85643200 85643199 85643265 66 TTCTACTTTTCTTTTTTATTTTCCGTTTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67040343 67040342 67040408 27189995 27189994 27190060 66 TTCCATATTTTTGATGTATTTTCCATTTTTTTCTGTTTTTTTTTTTCTGTATTTTCCATATTTTTT ...:.:x...:.xx.x........:.......x.............:.x.x....::x.x...... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 18602857 NA +3112 chr4 + 190214555 85655753 85655752 85655819 67 CAGAGTGAGACTCCATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 67652072 67652071 67652137 26578266 26578265 26578331 66 CAGAGGGA-ATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....x..-.:....:.::..:.x.:...:...:xx.x.x.:.:.:..................... 8M1D58M 49/66 74.2% 66/94230402 0.0% 1/66 1.5% 18003681 NA +3702 chr4 + 190214555 85655769 85655768 85655848 80 ATATATATATA-TATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 89611984 89611983 89612064 4618339 4618338 4618419 81 ATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAG ......x....-......x.x.....x:x.x..:x..............:........x.::.x:x:...:...:.:.... 11M1I69M 60/80 75.0% 81/94230402 0.0% 1/80 1.2% -3956215 -90274187 +14818 chr4 + 190214555 85675997 85675996 85676420 424 TGGAAGATAACAAAATCAAAATGGAGAAGAAATGAAAACAGTTTCCTAAGTTATAAATAATTGATAATGATGAT-AAAATTGATGGTAA-GTTTTCATTGCATAATTTGATTGATATGGCAGTTATCATAGCAGCCTTGAACAGAATGCTCTTGTGAACAAGATAATTCATCTCACTGAGTCTGTTTCGGCACAAATATTTTAAAATGAAAGGCATAATAAATCTGTACATAGAATACACACACT---GGGCTGCCAAACCTGCCACCTGTTTAAGCTTTTAATGAGCAGTCCTGCTTGCAACAAAAAGCCATATCAAATTAATGCTGACATTTTTCTTTGCTGCTGCTGTGCATATTCCAGGGACTCAGAGAGATCATTTTGCAAAATCCTCTAAATGGGGCAAACTCTGATTTTTTTCATTATAATT chr4 - 94230402 46599148 46599147 46599566 47630837 47630836 47631255 419 TGGAAATTACCTCAACTGCAACAGGTAACTAATGAGGAGAGTC-CCAAAGTTCTAAATATGAGATGACAATTGTCGGAATGAATGCTAACATTTTTACAACGTAATTTGATCAATGTAACAGTGATAGCAGCAGCCTTGAATGGGATGCTTTTGTGAACAAGGTAACTTATCTCAACGAGTACGTTC--ACGTAAATGTTTTAAAATGAAAGACAAGATAAATCTGT--CTAGAGCCCACATGCTGTAGAGCTGCCAAGCCTGCCACCTGTTCAAGATTTTAATGACCTGTTCTTTATTTAACAGAAG---AAGTCAAATTAATGCTGTCATTAACCTTTGCCGAGGCTTCCCTTATCTCAGGAGCTCTGCGATAGCATTCAGCACGTGCCTCTCAGTGGAGC-AGCTCTG-TTGCTTTAATTAGAGTT .....:x..x.xx..:::x..::.:x..xx.....::.x...:-..x.....x......xxx...:.::..x:.-::...x:...x...-:....:.:x:.:.........::..:.::....x..x::............::.:.....:...........:...:.:......x:....x:...:--:.::....:..............:..x:..........--x....::x....::..---.:........:.............:...x.........x.x..:..x:x.x:....:..:---.x:..............x....xx:......:.xx...x:x.x...::....::...x.x..x.x....:x...x:xx.....x.:...:..-.:.....-..x:...x....x.:.. 43M1D30M1I14M1I97M2D38M2D16M3I60M3D92M1D7M1D17M 290/414 70.0% 419/94230402 0.0% 15/414 3.6% 39076849 NA +3153 chr4 + 190214555 85721379 85721378 85721447 69 GAGCAAAACTCCATCTCAAAAAACAAACAAAAAAAAAAAAGAAAAGGAAAAGAAAGAAAAGGAAAGAAA chr4 - 94230402 4701388 4701387 4701456 89528947 89528946 89529015 69 GAGCTCAGCGCTATATATAAAAATAAACAAAACAGAAAAAGAAAACAGAAAAGCAGAAGAGGAAGAAAA ....xx.:.x.:..x.xx.....:........x.:..........x::...::x....:.....::... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 81019991 NA +7574 chr4 + 190214555 85721870 85721869 85721987 118 TATTTGTTTTCACAGGGTACTATTTTTCTGCCTGGAAATAAAGTTTCTGAGCATCCCTGCAATGAAGAGAACCCAGGGAAGTTCCTTTTTGAAGTAGTTCCAGGTAAGATATTTTCCT chr4 - 94230402 46609892 46609891 46610009 47620394 47620393 47620511 118 TGTTTTCTTCCTTAGGGTGCTATCTTTCTGCCTGGCAACAGAGTAATTGAGCACCCCTGCAATGAAGAGAGTCCAGGAAAGTTCCTTTTTGAAGTTGTACCAGGTAGGATATTCTACT .:...x:..:.x:.....:....:...........x..:.:...xx:......:................::.....:.................x..x.......:......:.x.. 118M 95/118 80.5% 118/94230402 0.0% 0/118 0.0% 39111978 NA +3010 chr4 + 190214555 85740194 85740193 85740237 44 TGGGATATTCTTTTT-GTTGTTGTTGTTGGGGTTTTTTTTTTTTT chr4 - 94230402 25791807 25791806 25791851 68438552 68438551 68438596 45 TGGGATTTTTTTTTTTGTCGTTGTTGTTGGGGTTTTTTTTTGTTT ......x..:.....-..:......................x... 15M1I29M 40/44 90.9% 45/94230402 0.0% 1/44 2.3% 59948387 NA +5615 chr4 + 190214555 85742122 85742121 85742213 92 GGGGAAGACACCATCTGCCACTGTTTGGCAGGATTTGGCCACCATGGCACAGAGTGGGCAATTGTCCTCAACCTTGGAGGCAGAAGCTGGCA chr4 - 94230402 46619370 46619369 46619461 47610942 47610941 47611033 92 GGGGAAGACTCCATCTGCCGCCATTTGGCACGGCTCAGCCATCAGAGCACAGAGCGTGCTATTGTCCTCAACCATGGCAGGAGGAGCTGGCA .........x.........:.::.......x.::.::....:..x:........:.x..x.............x...x:.x..:........ 92M 72/92 78.3% 92/94230402 0.0% 0/92 0.0% 39122752 NA +3080 chr4 + 190214555 85785455 85785454 85785517 63 TCTCCTTGTTCTGTTTTTGTTGTTGTTGTTGTTATTTTGTTTTGTTTTGTTTTTTTAAGAAAG chr4 - 94230402 17488386 17488385 17488447 76741956 76741955 76742017 62 TCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTG-TTTGGTAAGAAAG ...x:.....:x.:....x...................x.x..xx....-...xx........ 49M1D13M 50/62 80.6% 62/94230402 0.0% 1/62 1.6% 68297069 NA +3174 chr4 + 190214555 85800474 85800473 85800575 102 ACATAAGGTAGGAATTAAGAAGAAGAA--CAGGAGGAGGAAAAGGAGGAAGAAGAGGAGAGAGGGGGAAGGGAAGGAAGAGGAAGAAGAAAAGGGAGAGAAGGA chr4 - 94230402 15092424 15092423 15092525 79137878 79137877 79137979 102 ACACAAAG--GAAATCAAAGGGGAATATTCAAGAAGAGGAAAAGCAGGGAGAGGAGGTGACTTTGTTGGGGGGAGGCAGAGGGAGAAGATAGGAGTTAGAGGAA ...:..:.--.:...:..:::.:.:x.--..:..:.........x...:...:....x..xxxx.xx::...:...x.....:......x.:.:.xx...:.:. 8M2D17M2I75M 66/100 66.0% 102/94230402 0.0% 4/100 4.0% 70708050 NA +3174 chr4 + 190214555 85800474 85800473 85800575 102 ACATAAGGTAGGAATTAAGAAGAAGAA--CAGGAGGAGGAAAAGGAGGAAGAAGAGGAGAGAGGGGGAAGGGAAGGAAGAGGAAGAAGAAAAGGGAGAGAAGGA chr4 - 94230402 15089585 15089584 15089686 79140717 79140716 79140818 102 ACACAAAG--GAAATCAAAGGGGAATATTCAAGAAGAGGAAAAGCAGGGAGAGGAGGTGACTTTGTTGGGGGGAGGCAGAGGGAGAAGATAGGAGTTAGAGGAA ...:..:.--.:...:..:::.:.:x.--..:..:.........x...:...:....x..xxxx.xx::...:...x.....:......x.:.:.xx...:.:. 8M2D17M2I75M 66/100 66.0% 102/94230402 0.0% 4/100 4.0% 70710889 NA +3231 chr4 + 190214555 85800536 85800535 85800608 73 GGGAAGGGAAGGAAGAGGAAGAAGAAAAGGGAGAGAAGGAAAGGAGGAAGAGAAAGAAGAAAAAAGAGGAGGA chr4 - 94230402 33386346 33386345 33386418 60843985 60843984 60844057 73 GGAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAGAAAGGGA ..::..x:....:.x....:.:......x...:.:...x:.:....x.....:..::::.x..:...:::... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 52414190 NA +3004 chr4 + 190214555 85803920 85803919 85803979 60 ATGGACAAATTCTTTTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTCCTCGAGATGAAGT chr4 - 94230402 83476864 83476863 83476923 10753480 10753479 10753539 60 ATGAATGCATGCCCCTTTTTTTCTTTTTCCTTTTCCTTTTCCTTTTCTGTGGTATAAAGT ...:.::x..x.:::..............:.....:....::.....:x:.:x..:.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 2327056 NA +8621 chr4 + 190214555 85805272 85805271 85805516 245 CTTGCGTCCTTTCGAAAAGCACTAAAGGCAAAGGTGATATTTA---GGTC---CTCTAAGAGTCAATGTGGGTGAAAATGAAATACTTCTTCAGAGCACA-----GTCAGGATGATTACCCAGCC----GCTTTGATAAATTTACCGACATCTGTTACAGAGTCATTTCTGCTGCACAAATCTGCCATTAAC---AAACAGTA-AGGACTTTAATTAACTGAAGATACCAAGGAGTGATACTCTGATAAAATGGCACCATCTGG chr4 - 94230402 46638372 46638371 46638635 47591768 47591767 47592031 264 CTTGGGCTGTCCTGTAGAGCTGCCAAAGGAGAGGTAATATTTACCAGATTTGACACTGGAGGTCAGTGGGAATGTAAATAGAGTAGTCCTTCAAACGACACCGAAGTCAGAGCAATCATCCTGCTTGCAGCTTTGACAAATTCACTAACATCTGTTCTGGTGCCATTTCTGCTGCACAGACCTGCCATTAACTGTGAAGAGTAGAGGGTTTTAATTAACCAAGCAGACTGACATGTGAAACTTTGATAAGACGGTGCCATCTGG ....x.::x.:::.x.:...xx:x..:.x.:....:.......---.:.:---.x..::::....:..x.::..x....::.:..x.:.....:.xx...-----.....::::..:.:..x..:----.......:.....:..::.........x::.x.:...............:.:...........---:..x....-...::..........::.:x.x..::.x:x....x...:......:.:..::........ 43M3I4M3I47M5I20M4I63M3I8M1I60M 169/245 69.0% 264/94230402 0.0% 19/245 7.8% 39166900 NA +3129 chr4 + 190214555 85823839 85823838 85823905 67 CTCCCT---CCCTTCCCTCCCCTCCCCTCCCCTCCCCTTTCTTCCCTTTCTTTCTTCTTTTTCTTTTTCT chr4 - 94230402 18501284 18501283 18501353 75729050 75729049 75729119 70 CTCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCT ......---..:....x.....:....:.......::...:.....::::..x..:.x.:.x.xx..... 6M3I61M 49/67 73.1% 70/94230402 0.0% 3/67 4.5% 67322555 NA +3024 chr4 + 190214555 85827449 85827448 85827507 59 CTGAAGTCTGCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 27486713 27486712 27486771 66743632 66743631 66743690 59 CTGAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTAT ......x...x.:.................:x..x...x....:x:...:.x.:.x.:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 58340736 NA +3408 chr4 + 190214555 85835761 85835760 85835843 83 CTGCAACCTCCGCCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCGAGCAGCTGGGATTACAGGTGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.:.........x.x...x.xx.x........:..:..:......:.:....x....--:....::.. 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 67638635 NA +3025 chr4 + 190214555 85845994 85845993 85846059 66 CTCCCATGTTCAAATGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::x......:..x...x.xx.x........:............:.:....--.::x...... 54M2D10M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 67648855 NA +3064 chr4 + 190214555 85854119 85854118 85854166 48 GAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGG chr4 - 94230402 41477419 41477418 41477466 52752937 52752936 52752984 48 GACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGG ..x.:.x.:.....x.:...............:.....::........ 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 44376700 NA +3264 chr4 + 190214555 85859162 85859161 85859226 65 TGTGCACACACACA------CATATACACACATACACACATACATAGCCACATGCATACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....x.....x.:.------.:.:.:.....:.::.:::...:.:.......::...:............. 14M6I51M 48/65 73.8% 71/94230402 0.0% 6/65 9.2% 70894348 NA +3074 chr4 + 190214555 85894944 85894943 85895037 94 GAATGAGACTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCAGGA chr4 - 94230402 14334312 14334311 14334399 79896004 79896003 79896091 88 GAATGAAAAGCC------AAAAAAAAAAAAAAAAAAACCAACCAACCAACCAAACAACAAACACTAGGAAAGGTTAAAGAGCAGAAGAACAAAA ......:.xx..------...................xx..xx...x..x....x.:....x.xx.::...::xx.....:x....:.:..::. 12M6D76M 62/88 70.5% 88/94230402 0.0% 6/88 6.8% 71560632 NA +3157 chr4 + 190214555 85894950 85894949 85895011 62 GACTCCCTC--TCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAA chr4 - 94230402 84065970 84065969 84066033 10164370 10164369 10164433 64 GACTTTTTCATTTGAGGAAAAAAAAAAAAAAAAAGCAAAAACAAAACAACAATCGAGGAAAGAA ....:::..--.::.::.................:x.............x..x.:.::...:.. 9M2I53M 47/62 75.8% 64/94230402 0.0% 2/62 3.2% 1828980 NA +3007 chr4 + 190214555 85894958 85894957 85895039 82 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCAGGATT chr4 - 94230402 88022620 88022619 88022701 6207702 6207701 6207783 82 CTCTACAGAAAAAAAAAAAAAAACAGAAAAACAACAATAACAACAAGCCAACACAAGACTGAAATGTGGGCAAAGCAGGACT ...x.x.:...............x.:........x.xx..x.:...:xx..x.x..:.xx:...x:x::.x.........:. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% -2127662 -92102740 +3109 chr4 + 190214555 85894961 85894960 85895033 73 AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGC chr4 - 94230402 27736746 27736745 27736818 66493585 66493584 66493657 73 AAGGGAGGATGGAAGAAAAAAAAAAATACAATACAAAAACCGAAAAATTAAAAACGAAAAATAGCAAAATAGC ..:::.::.x::..:...........x....x.......x.:.....xx.....x:.....x.:x.:..x... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 58158215 NA +3276 chr4 + 190214555 85894962 85894961 85895034 73 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCA chr4 - 94230402 28306097 28306096 28306169 65924234 65924233 65924306 73 AAAAAACAAAAGAAATCTGTAAGAAATCAAAAATCAAAGCAAAAAATAAAAATAAAAAAAGACCAGCAAAACA ......x....:...xxx:x..:...x.....xxx...........x.....x.........xx..x...:.. 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 57588865 NA +3065 chr4 + 190214555 85894963 85894962 85895037 75 AAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGCAGGA chr4 - 94230402 25255637 25255636 25255711 68974692 68974691 68974766 75 AAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAA ...:x.:..x.x.x..:....xx:....:.:x..::x:....................:.:.xx...:.:...:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 60639326 NA +3137 chr4 + 190214555 85894968 85894967 85895018 51 AAAAAAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAA chr4 - 94230402 65303753 65303752 65303803 28926600 28926599 28926650 51 AAAAAAAAAAAGAAAAAAAAACACAGTAAAAAGCCATAACAAAGAAATAAA ...........:...........x.::.......x.x..x...:...x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 20591215 NA +3202 chr4 + 190214555 85894972 85894971 85895032 61 AAAAAAAAAAAAAAAAACAAAACAAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAG chr4 - 94230402 24753817 24753816 24753877 69476526 69476525 69476586 61 AGAAAAGTTAAGAAAAGTATGTCAGAAAGCCAAAAAAAAAAAAAAAGGAAGGAAGGAAAAG .:....:xx..:....::.x:x..:.....x...............::...:..:...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 61141155 NA +3424 chr4 + 190214555 85897955 85897954 85898033 79 TTCCTGTATAGAAATTTACCTCTAATACACACATATATATATATATATACACATATATATATACACACACATATATGTG chr4 - 94230402 56650806 56650805 56650884 37579519 37579518 37579597 79 TTGCTTTATAAAGGTTTAAGACTAACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG ..x..x....:.::....xxx....:.:x::..:.xx.....:::.:.:..:x......:................:.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 29247149 NA +3090 chr4 + 190214555 85897962 85897961 85898057 96 ATAGAAATTT--ACCTCTAATACACACATATATATATATATATACACATATATATATACACACACATATATGTGTATATATATATATATATATATATA chr4 - 94230402 73121084 73121083 73121181 21109222 21109221 21109319 98 ACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATA .:.....:.x--.:...xx:.:..::.....x:...:.:.........x.x::..:x::...:..:....x..::.::x:.....:.:x:..:..... 10M2I86M 60/96 62.5% 98/94230402 0.0% 2/96 2.1% 12776878 NA +10321 chr4 + 190214555 85923342 85923341 85923776 435 CAGCAGCTTCGCGTGAATAGATTGGATTACGAATTGATGCAGGCCTGTGGGTTGTTGCTAGGACAAAAAACCCAGGCTTTGTTTAGAAAATGACATTTGTTCTCCAGCTTTCTCCTGAAAGCATAACAGTCTCTC-CTTTTTAA-----AATTT------------TTCTTTCCACTCAGAAACC-ATGGTAAATATTTCATCATTGGGTAGAACTTAGTGC----GGGCTG----TATTAGGCACAGT-CTCTGTTT--CAGGGGTTCTTCTGGAGGCTGATCATGAGGAATCTCTGGATGCAACTTCAGCTGCATTGTTACTGTGTTTTCACAGGAGGCGATCGAGATCGGATGACAGCAAATCATGAAAGCTACCTCCTCATGGCAAGCACCCAGAATGATATGGAAGACTGGGTGAAGTCAATCCGCCGAGTCATATGGGGACCTTTCGGAGGAGGTGAGT chr4 - 94230402 46680450 46680449 46680888 47549515 47549514 47549953 439 CAGCA-CTTCCAGTGCATATATCAAGTTACAGATTAGTGCAGGCCCCGTGGCTCTTG-------GAACAGCTTGGG--TTGTTTA-CCGATGACATTTATCCTCTCACTTCCTTTTGGAAGCACAACAGTTTCTCACTTTCTGATGGGGAATGTACTTACAGGACCTTCTCTACATGCCATGGCTGACAGTAAACACTCCAGTGCACGGTGT--CTGCTTGCCATGGAGCTGCTGTTACTCCTTCCAGCACTCAGATTGGCAGGAGCTGGCTTGACAGGAAAGCGGAAGGGCTGTTCTAAAGT-------GCTGCAATCTT------CTCTTGCAGGAGGAGACCGAGAGCGGATGACAGCTAATCATGAGACGTATCTTCTTATGGCAAGCACGCAGAATGACATGGAGGATTGGGTGAAGTCCATCCGCAGGGTTATATGGGCACCGTTTGGAGGAGGTGAGT .....-....xx...x...x..::::....::...::........:xxx..:.x...-------:..x.:.:::..--.......-xx:.........:.:...:x:...:..::..:.....:......:....-....:.:.-----...x.------------....:.x..:x.x:x::.:-.::.....:.:.:..x:::xx...:x--..xxx...----.:....----..:.xxx:x...:-...x.x..--....:.:.xx::..:x:.xx:.x.:x:...:x.x.::x:.x.:-------......x.x..------:.:.::.......x..:.....x...........x........:.xx..:..:..:...........x........:.....:..:...........x......x.:..:.......x...x..:............. 5M1D51M7D12M2D7M1D49M1I8M5I5M12I19M1I26M2D8M4I6M4I13M1I8M2I43M7D11M6D138M 280/409 68.5% 439/94230402 0.0% 56/409 13.7% 39242892 NA +12254 chr4 + 190214555 85930354 85930353 85931048 695 GGTCCTTTGAAAGAAATCTATCATGCACTGAAATGCTTTCTGGAGAAGGTGCCATTATTT-TCCTCCCCTCTTGCTCAGATGAAAGGAGCCAGCAAGGA-CA----GTCCTGAAATATTCCTCAGGGGACTTTTTGTCATTGTTC--CTCTTTCCTCTTGCACAGAGCTATTTGCTGACCTTTCCAGAGGAATCT---------------CAGTCCAGCTGAGAAGAC--AGTTCTTAATAAAAACAAAAAAATGCAAAAACCAATTCCTGCTGTTTGAATGGGAATGGTAGCTTGCT-----TGCTGCAGTTCTTTTCCTGTGACATTTTGGAA--------TGTCT----GCAGAAACTTAAAAAAAAGAAAAAAAAAACCTTAAAAACTCCCTGGATTAGGCAAGAGAAAAGGAAGTTTTTTTTT---GCTAAACAGGAGTAAATGAGAGG-TGGTAACTTATCCCTAAGCCAGGACCTGGATGATCAAAACC------TTCAAATTCTAGGGATCAGCA-----CTTCAAAAATAACAAGTAAACAAGCATGAGGAGTGGCTGTTGGGTTTCGCTCAGAGGCAGGTTTTAAAGGAAGCCAAAACCGGGTTCAGAACTTCAGGCCTGTACGATGCCTGAAGACCGGAATTCTGGGGGGTGCCCGGCTGGTGCCTTAGCCTCAACTCCTTTCATCCCTAAAACTACATACAGAAGAATCAAACGGTGTTTTAGTTTTCGGAAAGGTAGGT chr4 - 94230402 46683713 46683712 46684418 47545985 47545984 47546690 706 GGCGCTTGGAGAGGAATCCGTGATGGACAGAAAGCCTTTGAGGCGAAGGGGCCACTATTTCTGCTCCTCAGCTGCAGGGCTTATAGGAGCCAGCGAGGAGCATCGCGTCCCAGAGGACCCTTCAATGGCCTTTCGGGTATTATTCTCCCCTGTCTCCTTGCACACCGCAGAGCACTGACCTTGTCCTGTGAATCTGGAGTCTCTGCCTCCCGTTCTGGCCAGGAGGAAGGAGTCTTTC---------------TGCATCTCTCTGTGCCGGC-GCTTCAGTCTGAATGGAAGATAGATCCTTCTGCTGAAACTCTTTTGTTGTGACATTGTATAAGGGACAGTTGTCTCACCGCAGGAAATAAACGAAAGGAAACAGAGG---------------------------GACGGAAGGAAATTGTTCCCCCAAGCCAAACTGAAGCGAGGAAGAGAACATTAAAATTACTTCAAGCTCTCTCTGGCAGCAAGAAAACTGCTCATCTCCTGCTCCAGAGGAAAATATACTGCTTCAAAACTCCTCAGCAGTCAG---TGAGGATGAGCAGTCGCGTTGTTTCTGGATGCAGCTGCTAAAGGAGATCTCTGCAGGGCCGTGGGGCTCCGGCCTGTATGATGCCTGAAGACAGAAATGCCGGAGTCCGCAGCCCTGGTGCCTTAGCAGCACCTCCTTTCCTCCCTAAAACTACTTACAGGAAAATTAAGCGGTGCTTTAGTTTCCGTAAAGGTAGGT ..:x...x..:..:....::.x...x..x....xx....xx..x.....x....:.....-.x....:.xx:...xx:.x.x.x..........:....-..----....:::.:x.::.:...:x..x....:x.x:...:...--.:..x..::........xx..x:xx::........x:.xx:x......---------------.:x..::..:::..:..x--...::..x---------------....xxxx:.x:.x..x..-.:..x.:.xx......x..x.x.x.-----.....x.::......x:.........x.:x..--------.....----....:..x.x..x:...:....x.:.::---------------------------..x::......:..x..::::---..:....x.:..::.:x:....:-::x...xx.xx.:::....:xxxx.:x.x.xx.xx.....:------:..xx::..:..:.:xx.::.-----........x.xx:x..:.:x..:---......xx:..x..:.x...x:x::::..x....x.x:.......:::.xxx:.x...::xx.::x:..x........:.............x.:...x.:..:.xx:..xxxx.............xx..x........x.............x.....:.:...:..:.....:........:..x.......... 60M1I38M1I2M4I39M2I48M15I18M2I8M15D19M1D25M5I32M8I5M4I28M27D21M3I23M1I41M6I21M5I23M3D198M 417/649 64.3% 706/94230402 0.0% 103/649 15.9% 39246641 NA +15667 chr4 + 190214555 85942064 85942063 85942278 215 AGGCATTTTTGGACAGAAACTGGAGGATACTGTTCGTTATGAGAAGAGATATGGGAACCGTCTGGCTCCGATGTTGGTGGAGCAGTGCGTGGACTTTATCCGACAAAGGGGGCTGAAAGAAGAGGGTCTCTTTCGACTGCCAGGCCAGGCTAATCTTGTTAAGGAGCTCCAAGATGCCTTTGACTGTGGGGAGAAGCCATCATTTGACAGGTAGA chr4 - 94230402 46692219 46692218 46692433 47537970 47537969 47538184 215 AGGTATTTTTGGCCAGAAGTTAGAAGACACTGTCCGATATGAGAAGCGATATGGGAACCGCCTGGCTCCCATGCTGGTGGAGCAGTGCGTGGATTTCATCCGCCAGCGGGGGCTGAAGGAAGAAGGCCTCTTTCGACTGCCTGGGCAGGCTAATCTTGTCAAGGAGCTCCAGGATGCATTTGACTGTGGAGAGAAACCTTCTTTTGACAGGTAAA ...:........x.....::.:..:..:.....:..x.........x.............:........x...:...................:..:.....x..:x..........:.....:..:..............x..x..............:...........:.....x...........:.....:..x..x...........:. 215M 184/215 85.6% 215/94230402 0.0% 0/215 0.0% 39249845 NA +3206 chr4 + 190214555 85950618 85950617 85950695 78 ATAATTTTTTTTC--------TTTTTCTTTTTCTTTTACTTTTATTTTTTCTTTTTCTTCTTTTTTCTTTTTTCTTTTTTTTTTAA chr4 - 94230402 6059584 6059583 6059669 88170734 88170733 88170819 86 ACAGTCTTTTTTCAGAAGATATTTTTCTTTTAATTTTACTTTGATTTTTTTTCCATATTCTGTTCTCTTTTACATTGTCTTTGTGA .:.:.:.......--------..........xx.........x.......:.::x.x....x..:......x:x..x.:...x.:. 13M8I65M 58/78 74.4% 86/94230402 0.0% 8/78 10.3% 79891034 NA +3063 chr4 + 190214555 85950631 85950630 85950706 76 TTTTTCTTTTTCTTTTACTTTTATTTTTTCTTTTTCTTCTTTT-----TTCTTTTTTCTTTTTTTTTTAAGAGTCTCCCTC chr4 - 94230402 21587572 21587571 21587652 72642751 72642750 72642831 81 TTTTTTATTTTATTTTATCCAGCTTTGCTCTTTATCTCTCCTTGCAACTCTTTTTTTTTTTTTTTTTCAAGGGACTCCCTC .....:x....x.....:::xxx...x:.....x...::::..-----.::......:.........:...:.x....... 43M5I33M 54/76 71.1% 81/94230402 0.0% 5/76 6.6% 64363059 NA +9604 chr4 + 190214555 85972022 85972021 85972182 161 TTCTGTCTCCACAGCAACACAGATGTACACACGGTGGCATCACTTCTTAAGCTGTACCTCCGAGAACTTCCAGAACCAGTTATTCCTTATGCGAAGTATGAAGATTTTTTGTCATGTGCCAAACTGCTCAGCAAGGAAGAGGAAGCAGTAAGTTGATGCAT chr4 - 94230402 46703691 46703690 46703849 47526554 47526553 47526712 159 TTCCAACCCAACAGCAATACAGATGTGCACACGGTGGCGTCGCTGCTGAAGCTGTACCTAAGGGAACTCCCAGAGCCAGTCATACCATATGCAAAATATGACGATTTCCTTTCCTGTGCCAAAATGCTCAGCAAGGAAGAAGAAATGGTGAGTT--TGCAT ...::x.:.x.......:........:...........:..:..x..x...........xx.:.....:.....:.....:..x..x.....:..:.....x.....::.x..x.........x................:...:::..:....--..... 154M2D5M 127/159 79.9% 159/94230402 0.0% 2/159 1.3% 39268331 NA +3003 chr4 + 190214555 85976743 85976742 85976801 59 AGAACTGTGTTTTAATTTCTACAGCATTTTATTTCTCTTTTTTTTTTTTTTTTTTCCGA chr4 - 94230402 38583 38582 38641 94191762 94191761 94191820 59 AGCATTGTGCTTTGTTTCCAAAGTCTTTTTAGTTTTCCTTTTTTTTTTTTTTTTTCCAA ..x.:....:...:x..:.x.x:x.x.....x..:..:...................:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 85938160 NA +9525 chr4 + 190214555 85977553 85977552 85977741 189 ATGCTTATACTCCATAGATTCTTGGATGAAGTACAGTCCTACTCGGGAGTTAACAAAATGAGTGTGCAGAACTTGGCAACGGTCTTTGGTCCTAATATCCTGCGCCCCAAAGTGGAAGATCCTTTGACTATCATGGAGGGTAAGTAAATGATTATCTTATACCCTTATCAAAAGAAGAAGTAATTATCT chr4 - 94230402 46706068 46706067 46706252 47524151 47524150 47524335 185 ATATTTCTTCCTCACAGATTCCTGGATGAAGTCCAGTCTTATTCAGGCATAAACAAAATGAGCGTGCAAAATCTGGCTACTGTTTTTGGCCCCAACATTCTCCGCCCTAAAGTGGAAGATCCTTTGACTATCATGGAGGGTGAGTTGACTGTAA----ATAACTTCAGCGAGAAAGAAAGAATATATTT ..::..x.x.::..:......:..........x.....:..:..:..x:.x...........:.....:..::....x..x..:.....:..:..:..:..x.....:.................................:...x:.:x:.x.----...x.:.:.x.:.:.:.::...x.xx...:. 154M4D31M 137/185 74.1% 185/94230402 0.0% 4/185 2.2% 39271485 NA +57372 chr4 + 190214555 85994577 85994576 85995662 1086 TTCTAGGCACTGTGGTGGTCCAGCAGTTGATGTCAGTGATGATTAGCAAACATGATTGCCTCTTTCCCAAAGATGCAGAACTACAAAGCAAGCCCCAAGATGGAGTG-AGCAACAACAATGAAATTCAGAAGAAAGCCACCATGGGGCAGTTACAGAACAAGGAGAACAATAACACCAAGGACAGCCCTAGTAGGCAGTGCTCCTGGGACAAGTCTGAGTCACCCCAGAGAAGCAGCATGAACAATGGATCCCCCACAGCTCTATCAGGCAGCAAAACCAACAGCCCAAAGAACAGTGTTCACAAGCTAGATGTGTCTAGAAGCCCCCCTCTCATGGTCAAAAAGAACCCAGCCTTTAATAAGGGTAGTGGGATAGTTACCAATGGGTCCTTCAGCAGCAGTAATGCAGAAGGTCTTGAGAAAACCCAAACCACCCCCAATGGGAGCCTACAGGCCAGAAGGAGCTCTTCACTGAAGGTATCTGGTACCAAAATGGGCACGCACAGTGTACAGAATGGAACGGTGCGCATGGGCATTTTGAACAGCGACACACTCGGGAACCCCACAAATGTTCGAAACATGAGCTGGCTGCCAAATGGCTATGTGACCCTGAGGGATAACAAGCAGAAAGAACAAGCTGGAGAGTTAGGCCAGCACAACAGACTGTCCACCTATGATAATGTCCATCAACAGTTCTCCATGATGAACCTTGATGACAAGCAGAGCATTGACAGTGCTACCTGGTCCACTTCCTCCTGTGAAATCTCCCTCCCTGAGAACTCCAACTCCTGTCGCTCTTCTACCACCACCTGCCCAGAGCAAGACTTTTTTGGGGGGAACTTTGAGGACCCTGTTTTGGATGGGCCCCCGCAGGACGACCTTTCCCACCCCAGGGACTATGAAAGCAAAAGTGACCACAGGAGTGTGGGAGGTCGAAGTAGTCGTGCCACCAGTAGCAGTGACAACAGTGAGACATTTGTGGGCAACAGCAGCAGCAACCACAGTGCACTGCACAGTTTAGTTTCCAGCCTGAAACAGGAAATGACCAAACAGAAGATAGAGTATGAGTCCAGGATAAAGAGGTAAG chr4 - 94230402 46708701 46708700 46709780 47520623 47520622 47521702 1080 TTTCAGGTACAGTAGTAGTCCAGCAGTTAATGTCAGTGATGATAAGCAAACATGAAGAGCTGTTTCCCAAGGATGCAGACCC-TGAGGTGGGACCCGAGGTG---TGCAACAATAACAATGAAATGCCAAAGAAAGCAATTGTTGGACAGCTACAAAACAAAGAGAACAACAACACCAAGGAGACAGCAGTGAGGCGCTGCTCTTGGGATAAACCTGAGTCTCCCCAAAGGGGAAGTATGGACAATGAATCTCCAACTGCACTGCCAGGCAGCAAGACCAGTAGCCCCAGGAACAGTGTCCAGAAATTAGATGTCACCAGAAGCCCACCACTCATGGTGAAAAAAAATCCTGCTTTTAATAAAGGCAGCGGCATAGTCACCAATGGATCATTCAGCAGCT---CTGTGGAGAGCCATGAGAAGAGCCAGACCTTACCAACCTGTACCCTGCAAGCCAGGAGAACATCTTCCCTGAAAGGAGCAGTGACTAAGATGGGCACACAAAGCATGCAGAATGGAGGTGTGAGGATGGGAGTTTCTAGCACCGATGGGCTCACCAACACCCTCAGCAACCGAAGCCCGGGCTGGGCACCCAATGGCAGTGTCACGCTGAGGGACAACAAGCAGAAGGAATCAGTGAGTGAGTCGGGTCAGCACAACAGGCTCTCCACCTATGACAATGTCCACCAGCAGTTCTCCACGGTGAACTCTGATGACAAACAGAGTGTGGACAGTGCTACCTGGTCAACGTCCTCCTGTGAAATATCCCTCCCTGAGCATTCTAACTCCTGTCGTTCATCCACCACCACCTGCCCCGAGCAGGACTTCTTTGCGGGTAACTTTGAAGACTCTGTGCTGGATGGACCACCACAGGAAGACCTCTCTAACACGGGTGACTATGAGAACAAAAGTGACAGAAGGAGTGTGGGGGGCCACAGCAGCAGAGCCACCAGCAGCAGTGATAACAGTGAAACGTTCGTTGCCAACAGTACTAACAATCATAGCGCTTTGCACAGCCTGGTGTCCAGCTTGAAGCAAGAGATGGCCAAACAAAAACTCGAGTATGAGACAAGGATAAAAAGGTAAG ..::...:..x..:..:...........:..............x...........xx:x..x........:........x.:-::.:.:::.x...:..:..---..-.:...:...........x.x:........x.:::.x..:...:....:.....:........:...........x.xxx.x:xx....:x.....:.....:..::.......x.....:..::.x..:...:......:...:..x..x..x..::..........:....::.....x.:.........:..x..::.......xx.:........x..x........x.....:..:..x..:........:..:..:..x.....:........:..x.........x---x..::..::.:.x......:.x...:...x:x..x.x:x.x.x...:..:.....:..:.xx.....x.....:.x.x.x.xx..:..:........:..x..::.:.........:xx...x.x.....x:...:x.:..x...::x:...:xx...x..x:x.:::x:....:.x:.:.....x::..x......x:...x..x........:...........:...:x..:x:.x....::..:...........:..x...........:........:..:..........:.:.....::.........:.....::.x.................x..x..............x............x.:..:...........:..x..:..............x.....:.....:....x...x........:...:....x:.......:..x..:.....x.....:..:x..x.x:.x........:.:..........x:x...........:..:.:x..:..:x.x........:........:........:..:..:..x.x......:.x:.:...:..:..:..x:.......::.:..x......:....:..:..:...:.......:..:x.x.........x.x........:....... 82M1D19M3D2M1I292M3D684M 808/1079 74.9% 1080/94230402 0.0% 8/1079 0.7% 39285876 NA +31789 chr4 + 190214555 86000472 86000471 86001188 717 TTTGTAGCTTAGAACAGCGAAACTTGACTTTGGAAACAGAAATGATGAGCCTCCATGATGAACTGGATCAGGAGAGGAAAAAGTTCACAATGATAGAAATAAAAATGCGAAATGCCGAGCGAGCAAAAGAAGATGCCGAGAAAAGAAATGACATGCTACAGAAAGAAATGGAGCAGTTTTTTTCCACGTTTGGAGAACTGACAGTGGAACCCAGGAGAACCGAGAGAGGAAACACAATATGGATTCAGTGAGCCT-----GCTTTCGCCTGCTGTCTCTGATGGCTCTGGCAAGGACTCCAGGGATTCTGGTGGGATATGACTTAGAACCAGGTGGCTGGTCACCTGGATGT----------------ACAGAAGTCTA---ACTGGTGAAGGAATATCATTTACAGACATTAAACATCCATATCTGCAATGTGTAC---CAAAGTTATATC------ATGCCCCATAATGCTACTGTCAAGTGTTACAACTGGATATGTGTATATAGAGTAGTTTTTCAAAAGTAAACTA------AAAATGAGAAGCATATTTCAAGAATTATTTTATTGCAAGTCTTGTATTTAAA-TGTTAAATCAATATGTTGTTGCAATTTAGCTTGCTTTCAAG--CTTCACCCCTTGCACTTAAC---ATAAGCTATTTTTGGCATTGTGTTATCATCGGCTTATTTTATAGATCAA---------TAT--TTTTATTTCCCTTTTTTGCTGAGGAAATGAAGATAAGCAAAAATATAAATATAT chr4 - 94230402 46710490 46710489 46711236 47519167 47519166 47519913 747 TCTGCAGCTTGGAACAGAGAAATCTCACCCTGGAGACAGAGATGATAGCCCTGCATGAAGAGCTGGATCAAGAGCGGAAGAAATTCACAATGGTAGAAATCAAAATGCGTAATGCAGAACGGGCCAAAGAGGATGCAGAGAAGAGGAACGACATGCTGCAGAAGGAAATGGAGCAGTTTTTCTCTACTTTTGGAGAACTGACAGTGGAGCCTCGCCGACCAGAAAGGGGCAACACCATCTGGATCCAGTGAGCATTGGAGGCTTTGACTGGGGGACGCTG--------GGGAAGGGCTTA------------GGGGTATTATACTGCGTCAGGTGGCTGGTCACCTGTCAGTCTGAGGCTAGCACTCAACATAATGTTATAGACTCTTGAAGGAAGAAATTGTACGTATGTTAACCACTCATATCTACAGTGTGTACTTATCAAGTCATACTCTTTGGATGCTTCATGAGACTACTGTCAAGTGTTACAACTGGATATGTGTATATAAA-----TTTTAAAAACAAAACCATCTTAGAGAGTGAGAGATGTATCTCAAGAAATATTTTAATTCAAGTCTTGTATTTAAACTGGTAAATTGAAATGTTGTTGCAATCAAGCTTTATATCAAGGCTTTTCTCCCTTGCACTTAACATAATAAGCTATTTTTGGCATTGTGTTACCATCAGCTTATTTTGTATATTAAATGTTGTTTTATTGTTTTGTTCCCCCCTCTTGCTG-GGGAGTGAAGATAAACAGATACGTAAAGGTAT .:..:.....:......x....::.x..::....:.....:.....::x...x.....x..:........:...x....:..:.........:.......x........x.....x..:..:..x.....:.....x.....:..:..:........:.....:.................:..:..x....................:..:x.xx..x.x..:..:..x.....x..x.....:........x.-----.....x:.:x.xx.x.x...--------..x....:..:x------------...:...x.:x:x.x::..................xxx..----------------...x..xx:..---...xx........x.xxx.x...:x.::....x..::.......:..:.......---:x....:...::------....::...:.x:....................................:.-----....x....xx....:.------.:.:.....::::...:.......x.......x.x.................-..x.....::.x.............:x.....xx.x.....--:..:x:..............---.........................:....:.........:..x..:..---------...--....:..:...::.:......-..:.:.........:..:.x.::....x:... 255M5I20M8D12M12D40M16I11M3I55M3I12M6I51M5D17M6I52M1I41M2I20M3I49M9I3M2I21M1D32M 538/691 77.9% 747/94230402 0.0% 82/691 11.9% 39289982 NA +3238 chr4 + 190214555 86078567 86078566 86078660 94 AAACAAGTATAAGGAAATACATATGTATATATATATATACACACACACACACACACACACACAAACATATGATAGAGTTCTGAATCTAGATTTT chr4 - 94230402 8395806 8395805 8395890 85834513 85834512 85834597 85 AAACATGTATT------TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA---CCCAAACTACATTCT .....x....x------...........::x..:..xx.:.................x.......::x..:.x.:.---.:x..x...x...:. 11M6D59M3D15M 64/85 75.3% 85/94230402 0.0% 9/85 10.6% 77682761 NA +3413 chr4 + 190214555 86078574 86078573 86078642 69 TATAAGGAAATACATATGTATATATATATATACACACACACACACACACACACACAAACATATGATAGA chr4 - 94230402 28470356 28470355 28470424 65759979 65759978 65760047 69 TATTAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAAGTAGA ...x.:.x.:............:.:.x.:..::.::........:...:..x......:x..x::.... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 57608218 NA +3154 chr4 + 190214555 86118558 86118557 86118610 53 ATGTATTTATATAAATACACATACACACACACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .........:...x:..::.x....:xx.:.................x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 77722748 NA +3007 chr4 + 190214555 86165537 86165536 86165604 68 CAGATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGATGAGGTCTCAGTATGT chr4 - 94230402 35318534 35318533 35318601 58911802 58911801 58911869 68 CAGAAAATGCTTTTTCTTTTTTTTCTTTTTCTTCTGTTGTGTTTTTCAAAACCAAAGGCTCAACCTGT ....x...x:.....:........:.....:..:.x..x.x.....:.:.:x::.:.x....::x... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 50847003 NA +3131 chr4 + 190214555 86180471 86180470 86180520 50 CCACTACTGGGTGTTCATCAAAAAAAAAAAAAAGAAGAAGAAAAAAGAAA chr4 - 94230402 25079838 25079837 25079887 69150516 69150515 69150565 50 CCAGTAATGGACATCCATCAGAAGAAAAAAAAAGAAAAAGAAAAAACAAA ...x..x...:::.:.....:..:............:.........x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 61100633 NA +3002 chr4 + 190214555 86191551 86191550 86191617 67 TGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGTTTAGTAACTATT chr4 - 94230402 66460628 66460627 66460694 27769709 27769708 27769775 67 TGCTCTCTTTTTTTTTTTTTTCTCTTTCCTATTTTTGTCCAGGAATTCTGTTTATTCAGTTACAATT ....:.:..............:.:...::.x.....x.::xx.xx...::...:..:...x..x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 19730923 NA +3079 chr4 + 190214555 86216223 86216222 86216319 97 TCCATCCAGGAATGAACAGATTAGCAAAATGTGCTATATATATATATATAGCACACACACATATATATATAGCATATATATATATATATATATATAG chr4 - 94230402 68928671 68928670 68928767 25301636 25301635 25301732 97 TTCATGTAAGTGAAAACAATACAGTATAAAGCATTTTTAATGTATATGAAGAATACATTGAAATATATATGGTTTACATATATATATATATATAAAG .:...x:.:.x:x:....:xx:..:.x..x.:::.x.xx..:.....:x..x.:...:xx.x........:.:x..:.................x.. 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 17287552 NA +3242 chr4 + 190214555 86221641 86221640 86221696 56 CACACCTGGCTGATTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTAGAGACAGGT chr4 - 94230402 16311200 16311199 16311255 77919148 77919147 77919203 56 CACAATTTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTTTTGCTGTAGAGATAAGT ....x:.x.:..:x....x...................x..x:........:.:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 69910441 NA +3045 chr4 + 190214555 86227489 86227488 86227550 62 AAAAAAAAAAAAGAAAGAAAAGAAAAAGAAAAGAAAAAAGACGCATAGATGGTACTATTCTC chr4 - 94230402 37024480 37024479 37024541 57205862 57205861 57205923 62 AAAAAAAAAAATGAAAGAAAAGAAAAAGAAACACGAAAATGTTCATATATGTTCATACGCTC ...........x...................x:x:....x::x....x...x.xx..:x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 49203009 NA +3032 chr4 + 190214555 86227492 86227491 86227530 39 AAAAAAAAAGAAAGAAAAGAAAAAGAAAAGAAAAAAGAC chr4 - 94230402 62049573 62049572 62049611 32180792 32180791 32180830 39 AATAAAAAAGAAGGAGGAGAAAAAGAAAAGAAAAAAGAC ..x.........:..::...................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 24177919 NA +3102 chr4 + 190214555 86242010 86242009 86242063 54 TTTTTGTGGGGGTCTTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGTTGTTATTG chr4 - 94230402 51318578 51318577 51318626 42911777 42911776 42911825 49 TTTTTGT-----TTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTG .......-----.:...x...........................x.x..x... 7M5D42M 44/49 89.8% 49/94230402 0.0% 5/49 10.2% 34923432 NA +3611 chr4 + 190214555 86286508 86286507 86286606 99 TCATCCTTATAGCAACCAGATGATATAGGTT-CTGTTATTATCCTCATTTTACAGATGAGGAAACTGAGGCAGAGAGAAGTGAGGAAACTTGTCCAAGGT chr4 - 94230402 10729162 10729161 10729261 83501142 83501141 83501241 100 TTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT .:.x...:.:.::.x..xx:...x:.....x-:.::...:.x.::..........:..:.:...........x.x.x.:..x.:.x..:...:...::.. 31M1I68M 65/99 65.7% 100/94230402 0.0% 1/99 1.0% 75557346 NA +3465 chr4 + 190214555 86312938 86312937 86313040 103 TTATGAGCATAAATTC-------TTTATTGTTTTTCGCAAGTATATACATATTTGTATGCCCTTGTAGATACATATGTAGGCATATACATACATGTACATAAATATGTAG chr4 - 94230402 51294097 51294096 51294203 42936200 42936199 42936306 107 TTGCAAGCATGAATTTAAAAGTGTTTAGAGTATTTC---AGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATAAAG ..:::.....:....:-------....xx..x....---..:....:.:...:...:...x.x:x.:x...::........:..:..:.......:.:x:...x..:x.. 16M7I13M3D71M 69/100 69.0% 107/94230402 0.0% 10/100 10.0% 35018841 NA +3678 chr4 + 190214555 86325220 86325219 86325380 161 ATGAGTACAGTAATATAGGAACAATAATAATAAGAGTTAGTACTTACTGACTTTACTGGGTGCCCAGGCACTTTTACATGAAATAATTAATTCACAAAACAATCCTATAAGGAAGGTCACTACTATTATCTCCATTCAAAAGAAAAAGAAATTGAGGCACA chr4 - 94230402 10729088 10729087 10729235 83501168 83501167 83501315 148 ATAAGTAAAATAA---AGAAGCAAGACTACTAATATTATGTACTCACT-------CTGAAGATCCTGAA---TAAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACA ..:....x.:...---..:.:...x.x..x...x.x.xx.....:...-------...::x::..x.:x---.xx...x...x.:...x.x:.x..x..:.x:...:.:...x....x.:......:.x.......:x.x..:x::::...:......... 13M3D32M7D14M3D89M 97/148 65.5% 148/94230402 0.0% 13/148 8.8% 75596132 NA +3562 chr4 + 190214555 86350290 86350289 86350356 67 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:.::..........x...x.xx.x........:............:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 68153164 NA +3359 chr4 + 190214555 86372525 86372524 86372596 72 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..x::..:x::...::::....::..........x........... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 61305540 NA +3614 chr4 + 190214555 86380204 86380203 86380266 63 AAGAGTGAAACTCTGTCTAAAAAAAG-AACAAAAACAAACAAACAAAAAAAACCCCCCCAAAAA chr4 - 94230402 6076387 6076386 6076450 88153953 88153952 88154016 64 AAGACTGAAACCTTCTTAAAAAAAAACAACAAAAACAAACAAACAAAAAAAACCCACATAGAAA ....x......::.x.:x.......:-............................x.x:.:... 26M1I37M 52/63 82.5% 64/94230402 0.0% 1/63 1.6% 80303817 NA +3071 chr4 + 190214555 86398196 86398195 86398260 65 TATTTCTAAAGATTCTCAAAAACAAACAAACAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAG chr4 - 94230402 65518366 65518365 65518430 28711973 28711972 28712037 65 TGCTCCTAGGCATACTCAAAAACAAACAAACAAAAAAAAATAAAATAAATGGGAATTGACAGAAG .::.:...::x..x..........................x.:..x.:.x::...xx..x.:... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 20879830 NA +3137 chr4 + 190214555 86427567 86427566 86427630 64 TTTAAGGAAAGCAGAAAGGAAAAAGAAAAGGAAAAGATGGAAGAGGAAGAGGATTAAAATGTTT chr4 - 94230402 56592975 56592974 56593038 37637365 37637364 37637428 64 TTTAAGGAAAGAATAAAGAAAAGAGAAAAAGAAGAGGCAGAAATGGCAAGTTACTAAAATGGTT ...........x.x....:...:......:...:..:::...:x..x.::xx.:.......x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 29834592 NA +3469 chr4 + 190214555 86431034 86431033 86431130 97 AAAGATGGTAGAAAAGAAGGAAAGGAGCAAGAAAGAGAAGGAGAGAGAGAGGAAGAGAGGAAAGGAGGAAGAAAAGAGAAAGAAAAGAAAAAAGAAA chr4 - 94230402 18119866 18119865 18119962 76110441 76110440 76110537 97 AAAAGCAGCGAAAGAGATGTGAAAGAGCACAAAGCAAAAGGAGCTAGAGTGGAACGAGAGAAAAAAGGACAAAAATAGTAAACACAGAAAAAGAAAA ...::::.:::..:...x.x:..:.....x:..:x.:......xx....x....x::::....::....x:....x..x..:x.x.......::... 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 68311168 NA +3469 chr4 + 190214555 86431034 86431033 86431130 97 AAAGATGGTAGAAAAGAAGGAAAGGAGCAAGAAAGAGAAGGAGAGAGAGAGGAAGAGAGGAAAGGAGGAAGAAAAGAGAAAGAAAAGAAAAAAGAAA chr4 - 94230402 18118978 18118977 18119074 76111329 76111328 76111425 97 AAAAGCAGCGAAAGAGATGTGAAAGAGCACAAAGCAAAAGGAGCTAGAGTGGAACGAGAGAAAAAAGGACAAAAATAGTAAACACAGAAAAAGAAAA ...::::.:::..:...x.x:..:.....x:..:x.:......xx....x....x::::....::....x:....x..x..:x.x.......::... 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 68312056 NA +3047 chr4 + 190214555 86431058 86431057 86431118 61 GAGCAAGAAAGAGAAGGAGAGAGAGAGGAAGAGAGGAAAGGAGGAAGAAAAGAGAAAGAAA chr4 - 94230402 58393276 58393275 58393336 35837067 35837066 35837127 61 GAGCAAGAAAGAGCATGTGAGAGAGAGGGAGGTACAGAGAGAGGAGGTGAAAAGAAGGCAA .............x.x.x..........:..:x.x::.::.....:.x:..:....:.x.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 28037782 NA +4067 chr4 + 190214555 86432350 86432349 86432423 74 CTGCAACCTCCATCTCCTGGGTTCAAGTGATTCTGGTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.............x...xx:x.x.........:.x.........:......x...... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 68235224 NA +3157 chr4 + 190214555 86455136 86455135 86455235 100 TAAATCTTGAAACATATCCTAGAAACACATCAAAA----TAGAACCTCTTTAATGCATACATCTCACAGGACCTACAACAAAAATACAACAACAACAAAAAAAA chr4 - 94230402 66137353 66137352 66137454 28092949 28092948 28093050 102 taaatattaaaaaaG--CAGAAAAACTCAACAAAAAGAATAGAAACTAGTTGATATTGACAGATCTCAGTTTCAGCAGCAAAAAAACAACAACAACAAAAAAAA .....x..:...x.x--.xx.:....x..x.....----.....x..xx..:..::xx...xx..x...xx:.x:..:......x................... 15M2D18M4I65M 71/98 72.4% 102/94230402 0.0% 6/98 6.1% 20317783 NA +3062 chr4 + 190214555 86511744 86511743 86511800 57 GGAAAGGGGGAGGGGAGAGAGGAAGAGAAAGAAGGAGAAGGAGAAGAAGAAAAGGAA chr4 - 94230402 7707314 7707313 7707370 86523033 86523032 86523089 57 GGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ....:.....xx...:::...:..::.:.:.:...:..x.....:.:........:. 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 78804430 NA +3186 chr4 + 190214555 86516601 86516600 86516663 63 TTTTGTTAGGTATATTCCTAAGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGTTT chr4 - 94230402 45429627 45429626 45429689 48800714 48800713 48800776 63 TTCTCTAAAGCAAATTGTTGGGGTTTTTTTTGTTGTTGTTGGTTGGTTGTTTTTTTTTTCTTT ..:.x.x.:.:.x...x:.::..x.................x...x.........x...x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 41086974 NA +3528 chr4 + 190214555 86516608 86516607 86516671 64 AGGTATATTCCTAAGGGTTTTT------------TTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 16279568 16279567 16279643 77950760 77950759 77950835 76 AGGTAAATTTCTGAAAGATTTTATGAAGACTGTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTGGGTTTTTTTGCTT .....x...:..:.::.x....------------............................xx....x....:.. 22M12I42M 54/64 84.4% 76/94230402 0.0% 12/64 18.8% 70237040 NA +3257 chr4 + 190214555 86516617 86516616 86516659 43 CCTAAGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTT chr4 - 94230402 14581392 14581391 14581434 79648969 79648968 79649011 43 CCTTCAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTT ...xx:.x................................... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 71935225 NA +3061 chr4 + 190214555 86516621 86516620 86516655 35 AGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT chr4 - 94230402 48695496 48695495 48695530 45534873 45534872 45534907 35 AGGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTT ................................x.. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 37821125 NA +3076 chr4 + 190214555 86516622 86516621 86516661 40 GGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTGT chr4 - 94230402 79423443 79423442 79423482 14806921 14806920 14806960 40 GGGGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTAGCTGT ...x..............................:x:... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 7093179 NA +3075 chr4 + 190214555 86516624 86516623 86516656 33 GTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG chr4 - 94230402 39858691 39858690 39858723 54371680 54371679 54371712 33 GTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 46657933 NA +3235 chr4 + 190214555 86532025 86532024 86532106 82 AAATTTTTTTAATTACATATATATATTATTTTTTATATATATTATTTTTATATATATACATATATATATACATACATATATA chr4 - 94230402 66033555 66033554 66033636 28196767 28196766 28196848 82 AAACTTAATTAAATGCAAGTAGATCTTACTGTTGATATTTCATGTTTGTATATATACACATATATTCATTCATATTTATACA ...:..xx....x.:..x:..x..x...:.x..x....x.xx.:...x........:........x:..x....:x....:. 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 20498470 NA +3471 chr4 + 190214555 86538235 86538234 86538304 70 CTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGTACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.::........:.x...x.xx.x........:..:.........:.:....--.:..:.....::.. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 68341096 NA +3203 chr4 + 190214555 86550351 86550350 86550420 70 GAAGGGCTAAGCAGAGCTTCAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCAGGCC chr4 - 94230402 38361408 38361407 38361477 55868926 55868925 55868995 70 GAAAGATTTAGTAGAATTTCAAGTGAAGATGAAAAAAAAAAGAAAAAAAAAGAGCAACAGACTTTAAACC ...:.::.x..:...::....:x.:..:.x:..........:.........:.:x..x.:...::.::.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 48188943 NA +3803 chr4 + 190214555 86558386 86558385 86558496 111 ATGGGCCTTAATTAATTCTCACCACACCCCTCTGAGGCAGGTTGGTATTATTATTCCCTCTTTATAGTTGAGGAAATGGAGACAAAAAGAGATTAGTATGAGATTTGCCCA chr4 - 94230402 10729150 10729149 10729257 83501146 83501145 83501253 108 ACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAA---GTAATTTGCCCA .::..xx..:...x.x:.....x.:......x.....:....x:x..:...:.x::..x:....:..x..:.:...:x...:..x.x.x..:...:---.x:......... 96M3D12M 72/108 66.7% 108/94230402 0.0% 3/108 2.8% 75829236 NA +3050 chr4 + 190214555 86579484 86579483 86579551 68 TATATAAATACAAGCAAATATGGATATGTGTATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:x::.:..:..x:...xx.:..:.....:.x:...:xx.:.................x..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 78183689 NA +3048 chr4 + 190214555 86584523 86584522 86584592 70 AGCCTCCACCTTCCAGGCTCAAGCAATCCTCCCATCTCAGCCTCCCAAGTTGCTGGGACTATAGGTGCAC chr4 - 94230402 18197130 18197129 18197199 76033204 76033203 76033273 70 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....:xx.x....::..:.....::x.:.x.xx:x........::.....x.....:....:.x...... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 68387393 NA +3005 chr4 + 190214555 86591338 86591337 86591391 54 AGAAAGCTCTTGATTTTCATATGTTTTTTTATTATTATTATTATTGTTATTTTT chr4 - 94230402 64299803 64299802 64299856 29930547 29930546 29930600 54 AGTAAGTTTTCAATTACTATGTGTTTTATTATTATTATTATTGGTGTTGTTTTT ..x...:.:.::...x::..:......x..............:x....:..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 22291535 NA +3340 chr4 + 190214555 86625533 86625532 86625586 54 AGATATTTTTAGTTTGTTTTTGTTTGCTTATTTTTTTGTGTGTATGTGTGTGTG chr4 - 94230402 16400254 16400253 16400307 77830096 77830095 77830149 54 AGAGGTTTCTAATTTAATTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTG ...x:...:..:...:x....x...x...x.............:.......... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 70225279 NA +8983 chr4 + 190214555 86635241 86635240 86635377 137 TTGTTTCCCAGGTAATATGCACGTGTCACTAGCTGAGGCCCTGGAGGTTCGGGGTGGACCACTTCAGGAGGAAGAAATATGGGCTGTATTAAATCAAAGTGCTGAAAGTCTCCAAGAATTATTCAGAAAAGGTAAGC chr4 - 94230402 46885259 46885258 46885395 47345008 47345007 47345144 137 TCATTTTGCAGATAACATGCATGTGTCACTGGCTGAGGCTCTGGAGGTTCGGGGAGGGCCGCTGCAAGAAGAAGAGATATGGGCTATTTTGAATCAAAGCGCAGAGAGCCTTCAAGAGCTCTTCAGAAAGGGTAAGC .::...:x...:...:.....:........:........:..............x..:..:..x..:..:.....:.........:.x..:........:..x..:..:..:.....::.x........:....... 137M 109/137 79.6% 137/94230402 0.0% 0/137 0.0% 39749982 NA +12749 chr4 + 190214555 86672305 86672304 86672546 242 TAATTTTAAGCAATTTTCTTCTTTTTTTTTATTTTTTATTTTGGTGCAATTACAAACCAGTAAGCCTAGCTGATCCTGCTGCCCTTGGCTTCATCATTTCTCCATGGTCTCTGCTGTTGCTGCCATCTGGTAGTGTGTCATTTACAGATGAAAATATTTCCAATCAGGATCTTCGAGCATTCACTGCACCAGAGGTTCTTCAAAATCAGTCACTAACTTCTCTCTCAGATGTTGAAAAGGTA chr4 - 94230402 46893580 46893579 46893798 47336605 47336604 47336823 219 TAATCTGCAGATGTTTTTTTTTTTTTTTTCCTTCTTT-----------------------CAAACACAGCTGATCCTGCTGCCCTGGGATTCATCATTTCTCCGTGGTCTCTCCTCTTGCTTCCATCCGGCAGTGTATCATTTACTGATGACAATGTTTCCCACCAAGACCTGCGAGCATTCACAGCACCAGAGGTTCTACAGAACCAGTCCCTGTCATCTCTCTCAGATGTTGAGAAGGTA ....:.xx..xx:....:..:........:x..:...-----------------------:..:.x:..................x..x..............:........x..x.....x.....:..:.....:........x.....x...:.....x.:..:..:..x...........x..............x..:..:.....x..:x.x.................:...... 37M23D182M 178/219 81.3% 219/94230402 0.0% 23/219 10.5% 39778725 NA +5248 chr4 + 190214555 86686708 86686707 86686788 81 AGATCCACATTTATTCTCTTGGAATGACACTGTATTGGGGGGCTGATTATGAAGTGCCTCAGAGCCAAGTAAGTTAAGTTT chr4 - 94230402 46898933 46898932 46899013 47331390 47331389 47331470 81 AGGTCCATATTTATTCTCTTGGTATGACGCTCTTCTGGGGAGCTGACCATGAAGTTCCTCAAAGCCAAGTAAGTTTCATTT ..:....:..............x.....:..x.x:.....:.....::.......x.....:.............xx:... 81M 66/81 81.5% 81/94230402 0.0% 0/81 0.0% 39787775 NA +13244 chr4 + 190214555 86688886 86688885 86689195 310 TCCTCCAAGTATGTGAAGTGTGTTTTAGTGTGGTTCCTGTGATTCCTAGAA--TGATTTGTCTCATTAGAAAAAATATTTGCTCACATTTACTCACTGGCTTTTCCTTTATTTATATTCAGCCTATTAAGCTTGGAGATCATCTCAACAGCATACTGCTTGGAATGTGTGAGGATGTTATTTACGCTCGAGTTTCTGTTCGGACTGTGCTGGATGCTTGCAGTGCCCACATTAGGAATAGCAATTGTGCACCCTCATTTTCCTACGTGAAACACTTGGTAAAACTGGTTCTGGGAAATCTTTCTGGGGTAAG chr4 - 94230402 46900663 46900662 46900949 47329454 47329453 47329740 287 TCCTTTTATCATGTTGAATGTCTTTT------GTTTCTGTGTGTGCTACAAGTTGATGT------TGAAACTAATTCTCTCCTCCCATCCATT-------------TCTGTTTGTCACTAGCCTATCAAGCTTGGAGATCATCTCAACAGCATCCTCCTTGGTATGTGTGAAGACGTCATTTATGCCCGAGTATCTGTACGGACCGTTCTGGATGCCTGCAGTGCTCATGTCAGGAACAGTAACTGTGCCCCATCTTTTTCATATGTGAAGCAGTTAGTAAGACTGGTCTTGGGAAGCCTGTCTGGGGTAAG ....::x.x:....x:.:...x....------...:.....xx.x...x..--....x.------.x.:.xx..x.x.:.x...x...::.:.-------------.:.:...:.xx::.......:..........................x..x.....x........:..:..:.....:..:.....x.....x.....:..x........:........:..::.:.....:..:..:.....x..x..x.....x..:.....:..x..:....:......::......::..x........... 26M6D19M2I6M6D28M13D206M 216/285 75.8% 287/94230402 0.0% 27/285 9.5% 39788223 NA +23026 chr4 + 190214555 86701227 86701226 86701822 596 TCTTATCATTCCAGGAAGAAGCTCTACTTCTGATGTACTAGACATACAAAAGCCTCCACTCTCTCATCAGACCTTTCTTAACAAAGGGCTTAGTAAATCTATGGGATTTCTGTCCATCAAAGATACACAAG---ATGAGAATTATTTCAAGGACATTTTATCAGAT---AATTCTGGACGTGAAGATTCTGAAAATACATTCTCCCCTTACCAGTTCAAAACTAGTGGCCCAGAAAAAAAACCCATCCCTGGCATTGATGTGCTTTCTAAGAAGAAGATCTGGGCTTCATCCATGGACTTGCTTTGTAC------------AGCTGACAGAGACTTCTCTTCAGGAGAGACTGCCACATATCGTCGTTGTCACCCTGAGGCAGTAACAGTGCGGACTTCAACTACTCCTAGAAAAAAGGAGGCAAGATACTCAGATGGAAGTATAGCCTTGGATATCTTTGGCCCTCAGAAAATGGATCCAATATATCACACTCGAGAATTGCCCACCTCCTCAGCAATATCAAGTGCTTTGGACCGAATCCGAGAGAGACAAAAGAAACTTCAGGTTCTGAGGGAAGCCATGAATGTAGAAGGTTAGT-AATTCTGTGCATGTT chr4 - 94230402 46914794 46914793 46915393 47315010 47315009 47315609 600 TCTCCTTGTTCCAGGAAAAGCCTCAGTGGTTGATGCACGTGACGAACACAAGACTAATTTCTCTCAACAGACAATGCTTAACAAAGGGCTTAGCAAGTCGATGGGATTTCTGGCCATGAGAGGAACACAAGGCGAAGAGGAATTTTTCCAGGGCATTTCTTCAGATTACAACTCAGGACAGGAAGATTCT---------TTCTATCCTTACAGATGTAAAACCAATGAGTTTGAAAACAAAGGTCACCTCCATACAGATGCAGCTCCCAAGCGGAAGGTATGGGCTTCCTCCACAGACTTGCTTTGCACGACCAACAGAGCAACTGAAAGGGACCATGCTTCAG-----ACTCTCACAGG-CACAGTCATCAATGTGAGACCTTCGCGGTACGGACTTCTACTATGACCAGAAACAAAGAGGCTAGATACTCCGATGGGAGCATAGCACTGGATATCTTTGGACCTCAGAAAGTGGACCAAACGTGCCACGTGCCTGAGACATCAACTTCTGCAGCAATATCGAGTGCCTTTGACAGGATAAGGGAGAGACAGAAGAAGTTGCAGCTCCTGAGGGAAGCCATGAGTGTAGAAGGTTAGTGAAGCTTTTGGATGTT ...:x.::.........:.:x...x::xx:.....:..xx...:x...x...x..xxx:.......x.....xx.x.................:..:..x............x....x.:..:x.......---.x...:.x.x....x...:.....:x......---..:..x....:x.........---------....x:......x::.x:.....:.:..:x::x.....x...xx:xx..::x::.:x....::x:.:.:...x:....:.x........x....::...........:..------------.:....x..:...:x:x......-----...x:....x:-.::x..::...x:x....:.xx.x:.:..:........x....:xx.:.....x..:.....x........x.....:..:.....x:.............x.........:....:.x..::.::...::x.xx..:x:::.x..:..:x..........:.....:..x...x.:..xx.:........:.....::.x...x.:................:..............-..x::.x..x..... 131M3I32M3I21M9D110M12I23M5D11M1D238M1I15M 411/581 70.7% 600/94230402 0.0% 34/581 5.9% 39786433 NA +3403 chr4 + 190214555 86715189 86715188 86715290 102 TTTATATTTAAATTGTTGTGTTTGTGTGTATGTGTGTGTGTATATACGTGTGTGTGTATATATGTGTATATATAGGAGATGGAAAAAATATATGTGTGAGTA chr4 - 94230402 50065491 50065490 50065579 44164824 44164823 44164912 89 TCTATATTTGCTTTCTT----TTATGTCTGAGTACATGCGTACAAACATTTGTGTGTATACATGCGTATATATGAGAG---------ATCTACGTGTAAGTA .:.......:xx..x..----..:...x.:x..:::..:...:.x..:.x..........:...:........::...---------..x..:....:.... 17M4D57M9D15M 65/89 73.0% 89/94230402 0.0% 13/89 14.6% 36649698 NA +6609 chr4 + 190214555 86716501 86716500 86716631 131 TTCTAATCTTTTTGTTTTAATCCTTTTAGAACCAGTTCGAAGATACAAAACTTATCATGGTGATGTCTTTAGTACCTCCAGTGAAAGTCCATCTATTATTTCCTCTGAATCAGATTTCAGACAAGGTAGGA chr4 - 94230402 46924741 46924740 46924869 47305534 47305533 47305662 129 TTCTGATACCCTGATTTCAA--CTTTCAGAGCCTCTGAGAAGGTACAAATCATACCACAGCGATGTTTACAGTACTTCGAGTGAAAGTCCATCCATTATTTCTTCAGAAGCAGATTTCAGGCAAGGTAAGA ....:..x:::.x:...:..--....:...:..xx.xx....:......x.x..:..::.:.....:.x:.....:..x..............:........:..x...x..........:.......:.. 20M2D109M 97/129 75.2% 129/94230402 0.0% 2/129 1.6% 39791760 NA +3359 chr4 + 190214555 86721695 86721694 86721775 81 CCCGCTCCCTCCCCCTCTCCCTCCCCCTCCCCTTCCCCCTTCCCCCTTCCCCTCTTTTCTCCTTTCCTCTCCTCTCTTCTG chr4 - 94230402 20485614 20485613 20485694 73744709 73744708 73744789 81 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATG .::...::.:x.....x:...x.....:...:..:......::.:...:...::..::..:::..::..:::.xx...x.. 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 66236081 NA +13619 chr4 + 190214555 86722173 86722172 86722452 280 TTCCTCCCAATCCTCACCTGTCTCCTCTTTT-CTATATAGCAGACAATATGAAACACCCTTTGAAGGCAACTTAATTAATCAAGAGATCATGCTAAAACGGCAAGAGGAAGAACTGATGCAGCTACAAGCCAAAATGGCCCTTAGACAGTCTCGGTTGAGCCTATATCCAGGAGACACAATCAAAGCGTCCATGCTTGACATCACCAGGGATCCGTTAAGAGAAATTGCCCTAGAAACAGCCATGACTCAAAGAAAACTGAGGGTAAG---TTGATTCTCAGGT chr4 - 94230402 46934050 46934049 46934332 47296071 47296070 47296353 283 TTCCTACTGGTAATGACTTTTATCCCCTCTGACTGTGTAGCAGGCAGCATGAAGCACCATTTGAAGGCAATCTCGTCAGTCAAGAAGCAATGCTAAAGCGCCAGGAAGAAGAAATGCTACAGCTGCAGGCTCGCATGGCTCTCAGGCAGTCCCGGCCCAACCTCTACTCTGGAGATGCAATCCGGTCCTCTATGCTGGATATCACAAGAGATCCACTCAGAGAAATAGCCCTGGAAACAGCCATGACTCAAAGGAAACTGAGGGTAATGCCTTGA-TCTCAGGT .....x.:::.xx.x..:.x.x...:..:.x-..:.:......:..::.....:....x...........::.x:.:.:......:::x........:..x..:..:......x..x.:.....:..:..:x:x.....:..:..:.....:...::x.:...x..::.x.....::.....x::x.x..:.....x..:.....x..:.....::.x........x.....:....................:.............x---....-........ 31M1I236M3I4M1D8M 205/279 73.5% 283/94230402 0.0% 5/279 1.8% 39788123 NA +17049 chr4 + 190214555 86732371 86732370 86732769 399 AATATTGATTC-TGCTTATGTGATTTGCAGAATTTCTTTGGCCCTGAGTTTGTGAAAATGACAATTGAACCATTTATATCTTTGGATTTGCCACGGTCTATTCTTGTAAGTAATAAA------ACCAATTTGTGTCACTCTTAGAAAATAATTTCAGTAGTGTTAAAAACCAGTTAAAATTCTTATAATGCTTATTTTAATAAATGCCG------TTTATTTTTTCAATTGTAGACTAAGAAAGGGAAGAATGAGGATAACCGAAGGAAAGTAAACATAATGCTTCTGAACGGGCAAAGACTGGAACTGACCTGTGATACCAAAACTATATGTAAAGATGTGTTTGATATGGTTGTGGCACATATTGGCTTAGTAGAGCATCATTTGTTTGCTTTAGCTACCCTCAAAGGTA chr4 - 94230402 46935662 46935661 46936053 47294350 47294349 47294741 392 AGTATTCATTCATACTCTTGTGCTTTGCAGAATTTCTTTGGCCCTGAGTTTGTGAAAATGACGATTGAACCATTCGTCTCCTTGGATCTGCCAAAGTCTATCTTGGTAAGAGAGGGACTACTGAACAATTGGTGGCA----GGGAAAATATATTTA------------ACCAACGAATGCACCT-TAACCATGAGT---GTGAACACTGGGATATTTTGTTTCATCAAATGCAGACGAAGAAAGGGAAGAATGATGATACAAGGAGGAAAGTCAGTGTGATGCTTCTAAGTGGACAGAAGCTGGAGCTGACCTGTGACACCAAAACAGTTTGCAAAGATGTCTTTGATATGGTTGTTGCCCATATTGGCTTAGTGGAGCATCACTTATTTGGACTGGCTAGTTTAAGAGGTA .:....x....-.:..:x....x.......................................:...........::.x..:......:.....x:......::.x.....x:.x::.------.x.....x...x..----x:.......xx..:.------------....::x..x::x.:.-...:xx.x.x.---:.:..::.:.------...:...:x....x..:....x.................x....xxx.:........x.:::.:........:.::..:..:.::.....:...........:........x:.x..:........x..............x..x..............:........:..:....xx:.:....x::.x.:..... 11M1I105M6I14M4D15M12D16M1D11M3D10M6I197M 287/379 75.7% 392/94230402 0.0% 33/379 8.7% 39796709 NA +19619 chr4 + 190214555 86734265 86734264 86735751 1487 TTTTTATTTTATCTGAATATTTTTCTC----ATTCTGTTTAGATAATGAATATTTCTTTGTTGATCCTGACTTAAAATTAACCAAAGTGGCCCCAGAGGGATGGAAAGAAGAACCAAAGAAAAAGACCAAAGCCACTGTTAATTTTACTTTGTTTTTCAGAATTAAATTTTTTATGGATGATGTTAGTCTAATACAGTGAGTACACAAGAGTTTCTCTTTTGCTCTTTTTGGACACTGGTCTTTTGACCCTTTAGCTTACTGATACTGAATTACTTGATTCCAATCAATGATAATGTCTGCTTTATCATAAAAGTAATATTTCTTTCAACACAGTTTATCTAATCCTTATGCCTTAAAAGCTTAATAATAAGCTTAGTAATAAACTCATGGAAATTAACCTTACATGCCTATAATAAAAACCACCCCAGTATTCAAAATCAAAGGCCAAGATGTCTGTGTGTGTTTGTTTTTTCAGACATACTCTGACGTGTCATCAGTATTACCTTCAGCTTCGAAAAGATATTTTGGAGGAAAGGATGCACTGTGATGATGAGACTTCCTTATTGCTGGCATCCTTGGCTCTCCAGGCTGAGTATGGAGATTATCAACCAGAGGTAGGATTTGTGTTTTTTTCCAGGACCATTTTTGTTTGGTGTTGTTACCTTTAACATAGTTAATGACTAAACC-TGATTCA-GGTGTTTGATGTTTAGATCTGAAGATTTTTGAGGCTTCTTTGGTTCCTCAGAATGACCAAGCACTCCATGTATATCAATTATATAAAATCATGAAGTGTGGGATTTTTTTTTCCTGTTTAAAGTTATCCTGTTTTGG---AGTTTAGGAATATCTACCACTTACTCCTTCTCCTGAGTTCTAACCTATAGAGACTATACACAGGAGTTATTAGTCAAATATAAATTAAAAGGATCTCCTGCCTTCCACATGATGGGCTGGCAGCCTGGCAGAGCTTACTGTGTGGAGA---ACTCACAGTATACTTAAAGCCTGATGTTTCTAAATAAAATTGATCTAAGAGGAAGCAAGGGGCTAGAAGCTGTGCTGCTGGAGCAGCATCCTTCACAACGTTCATCCTAAACTAGAGTGATATGAGGCCCTTGAATGTCACACTTCTCAAGCTTGCTGATCAGTTCAGTCATTTTATCTCACTGAATAGAAAAGAAAGACTGATGCATTTCTTCTAAAACTCATTCCTCAGAGAGAGAGGTAGAAATAGAAGTACTTCATCTCTTAGCCAAAGCAAGAACTTTAAGATAGAAGGAAAAGGGTTTACTCCAATAAAAGGCAAACAATTGCTTATGAAAACATTCTTTTATCTAGGTTCATGGTGTGTCTTACTTTAGAATGGAGCACTATTTGCCCGCCAGAGTGATGGAGAAACTTGATTTATCCTATATCAAAGAAGAGTTACCCAAATTGCATAATACCTATGTGGGAGCTTCTGAAAAAGAGACAGAGTTAGAATTTTTAAAGGTAAG chr4 - 94230402 46937007 46937006 46938086 47292317 47292316 47293396 1080 TTCTGTTTTTACCCATGTCCTTTTCTTCAATGTTCATGGCAGACAATGAATTTTTCTTCGTTGATCCTGACATAAAGCTGAGCAAAGTAGCTCCAGAAGGATGGAAAGAAGAGTCGAAGAAAAAGAACAAGCCCCCTGTCAACTTCACGCTGTTTTTTCGCATCAAGTTTTTTGTGGATGATGTCAGTCTTATACAGTGAGTGTAT--GAACATCTTTTTAAC-----------------CTCTTAAGCTCTAAGCCTATGGATA-------------------------------------------TAAATTGAATATTTTT-------CAAGCCCTCCAA-----ATTCCTTAAAA--------ATAAG---AGTACCAAAG--ATGGTGGTT---CTTTTATGTGTTT------------TCTTTTCTTT-------------------TATATATATATATTTCCTTCTAGGCATACTCTCACTTGTCACCAGTATTACCTGCAGCTGCGGAAGGATATCCTGGAAGACAGGATGCACTGTGATGATGAGACAGCCTTATTGTTAGCATCCCTGGCTCTTCAAGCTGAGTATGGAGATTACCAGGCAGAGGTACACCATCAGTTTCATCTCTGAGAAATTATTTTTTCTTTTTTCTGCTT-------AGTAAAAGAATGGACTGTGAGCTACTGTGCATGCTTCACAGTTCTG----------------CCCTGGA----CAGGGAAGTCAGACATTGTGTTGTTGGCAATTGTA-----------------------------------------------GTTTTCGTACAGTCTAG----------------------------------------CAGAGAATAGACACGAGACTGTT--GTGGAACCTAATTCAAGA-------------TCCAAGTGTTGAGCCCTC------------CCTATTCAGTGGAGATGAATTCAGGCTTGAGT--AGGCCTTCAAAGTATAAGTGAAATTAAGCTCTGGGTCAGCACCAGGAT------------------GCGGAATCCCTTCTCTTACTCAGTCTAA----------------------------------------GATTACAGATC------------------------------------------TGTAATTCTGTTTAAAATTAGTC-----------------------------TTTATGTTTCAGTCATATCCATA-------------------------TAGTCCG-TAGCATGTGGAGACGCTGTCACAAAACTATTTTGTATTGTAGGTGCACGGCATGTCGTATTTCAGACTAGAACACTATGTCCCAGCTAGAGTGATGGAGAAACTGGATACATCCTACATCAAGGAAGAGTTGCCAAAGTTGCATAGCACTTACGTGGGTGCTTCTGAAAAAGAGATAGAATTAGAATTCTTGAAGGTAAG ..:.xx.....:.::x:.x:......:----:...xxxx:...:.......x......:............x....::.:.x......:..:.....:..............::.:..........x...:x..x....:..:..:..x:.......:x.x..:..:......:..........:.....x...........::.:--..::x...:...x:.-----------------..:..:.x.::.x...:..:x....-------------------------------------------....xxx.......:.-------..:x::x..:..-----..x........--------.....---....x:...x--....x::..---...x:...:x.x.------------:.:xx.x..:-------------------.x.:.:.:.:.x.x.::..::..:........x..x.....:...........x.....x..:..:.....::....:..x.......................xx........:.:......:.......:..:.................:..:x........x:x:x.xx....:x.::.x.::xx...x..x...xx.x..x:.:.:.-------...x..x..x.::..:-...x::.-x...:x..x.x:x:..x....----------------.::...x----...::x:::..::..:.x::.xxx.:x.....:..-----------------------------------------------.....x.---...:...----------------------------------------:.....x..x....::..x.xx.--..x:..:x...x.:..:.-------------....x:..x..:..:xx.------------.:..:.xx.......---.:...x:x.xx.x.--.:....xxx:xx.x...:.:.....:.x..xx.:.xx....xx:..x.------------------..:.x....:.:x:xx:::...x:....----------------------------------------.x..:.x....------------------------------------------..:.x....x:.x...x.:.x..-----------------------------..:..x.:.:..:..x.x.x.x.-------------------------..x...:-..:x.x.:::.x.xx:xx.:.::...x:...:.x.xx.x.....x..:..::....x..:..:...x.:..:......x.x..x..:.................x...x:......:.....:........:..x..:.......::..:..:.....x................:...:........:..:........ 27M4I175M2D15M17D25M43D16M7D12M5D11M8D5M3D10M2D9M3D13M12D10M19D212M7D16M1I7M1I21M16D7M4D35M47D7M3I7M40D23M2D18M13D18M12D15M3I14M2D48M18D28M40D11M42D23M29D23M25D7M1D200M 733/1068 68.6% 1080/94230402 0.0% 431/1068 40.4% 39797258 NA +3151 chr4 + 190214555 86740852 86740851 86740947 96 TCTCAAGTTGAAAGTTCCACAAATCTCTAGGGAAAGGGCAAAATGCTGCCAATCTCTTTGCAAAAAAAAAAGAAAAAGAA-AAAGAAAATAACAAGA chr4 - 94230402 22746065 22746064 22746153 71484250 71484249 71484338 89 TCTGAAATCAGAAGTTC--------TTTAGACAAAAGACCAGAGGCTACCAGTAGCTCTCAAAAAAAAAAAAAAAAAGAACAACAAAAACAACCAGA ...x..:.:::......--------.:...:x...:.:.x.:.x...:...:.xx..:.xx..........:........-..x:....:...x... 17M8D55M1I16M 63/88 71.6% 89/94230402 0.0% 9/88 10.2% 63994787 NA +11733 chr4 + 190214555 86744962 86744961 86745135 174 GTAGAAAAAGAAAATCACATTGCAAAATACATCAGATGGAATAAAACATGGCTTCCAGACAGACAACAGTAAGATATGCCAGTACCTGCTGCACCTCTGCTCTTACCAGCATAAGTTCCAGCTACAGATGAGAGCAAGACAGAGCAACCAAGATGCCCAAGATATTGGTAAGGA chr4 - 94230402 46940194 46940193 46940367 47290036 47290035 47290209 174 GTAGAAGAAGAAAATAACGTTGCAAAACACATCGGATGGTATCAAGCATTCCTTTCAGACTGACAACAGTAAAACCTGTCAGTACCTTTTGCATCTCTGCTCTTCCCAACATAAGTTCCAGCTGCAGATGAGAACCAGGCAGAGCAACCAGGACACTCAGGACATTGGTAAGGA ......:........x..:........:.....:.....x..x..:...xx...:.....x...........:.:x..:........x:....:..........x...:..............:.........:.x..:...........:..::.:..:..:........... 174M 143/174 82.2% 174/94230402 0.0% 0/174 0.0% 39804768 NA +26622 chr4 + 190214555 86750468 86750467 86751151 684 AGAGAGAGCTTCGTTTAGGAGCCTGAATCTCCAAGCAGAGTCTGTTAGAGGATTTAATATGGGACGAGCAATCAGCACTGGCAGTCTGGCCAGCAGCACCCTCAACAAACTTGCTGTTCGACCTTTATCAGTTCAAGCTGAGATTCTGAAGAGGCTATCCTGCTCAGAGCTGTCGCTTTACCAGCCATTGCAAAACAGTTCAAAAGAGAAGAATGACAAAGCTTCATGGGAGGAAAAGCCTAGAGAGATGAGTAAATCATACCATGATCTCAGTCAG------GCCTCTCTCTATCCACATCGGAAAAATGTCATTGTTAACATGGAACCCCCACCACAAACCGTTGCAGAGTTGGTGGGAAAACCTTCTCACCAGATGTCAAGATCTGATGCAGAATCTTTGGCAGGAGTGACAAAACTTAATAAGTAAGAACATATTAACTAACCC--AATTACATATTTGTAAATTC----TACATTTCATACGTTTCTTTTTGTTATGACATTTTATTATTTTCACCA-TATTTTTTTACATTAACACTTCCCT-------------------------------------CCTACCTTCCTTTTCCCTCTTCAGTTCAAAGTCTGTTGCGAGTTTAAATAGAAGTCCTGAAAGGAGGAAACATGAATCAGACTCCTCATCCATTGAAGACCCTGGGCAAGCATATGTTCTAGGTCAG----CAAAAACAAGCTTACCTTCTTT chr4 - 94230402 46942955 46942954 46943681 47286722 47286721 47287448 727 AGAGCGAGCTTCCTTTAGGAGCCTGAACATCCATGCGGAGTCAGTGAAAGGCTTTGGCATGGGGCGGGCCATCAGCACGGGCAGCCTGGCCAGCAGCACACTGAACCGCCTTGCAGTGCGCCCTCTATCTGTGCAGGCGGAGATCCTGAAGCGACTATCCTGCTCTGAGCTCTCGCTCTTCCAACCACCCCCTGGCTCTTCAAAGGACAAGAATGTAAAGACTTCGTGGGAGGAAAGACCCAGGGTGATTAGCAAATCGTTCCATGATCTGAGCCAGAGCCATATCTCAGTTTACCCTCCGAGGAAGAATGTTATCTCAGCTTTGGACTCTTCCTCCCAGAAAATAGAGGACTTAATGGGAAGGGTCTTTCAGCGAATGCCAAAATTTGATACTGGATCAGCAGCAGGAGCATTAAAACTGAACAAGTAAGAGTCTCTCTGAGCACCCTGAAATTCCTTTGTGTACATTTGATGTACATTT--TGCATCGGTTTT---------AATTTATTATTCATACCATTATTTTATTACACTGATCCTTCCCTTCCCTCTCCCAATTTCCTTTTCCCTCTGTCTGATTTCCCTTCTCTCCTTCTCCCCTTTAAGTTCAAAATCTCATGCAGGTTTAAGTAGAAGTCCTGAAAGAAAGAAAAATGAATCGGACTCATCATCCATGGAAGATACCGGGCAAGCCTATGTTGTAGGTCAGCACACAAAAATACTGTTACTGTATTT ....x.......x..............:x....x..:.....x..x.:...x...:::.....:..:..x........x.....:..............x..x...x:x.....x..x..x...:....x..x..:..x.....:......x.:...........x.....x.....:.x...:...::x.xx::.xx......:..x.......xx..::....:..........::..:..:.x...x..:.....:.x.........x..:...------::...xx.:..:..x.xxx....:.....:..:x:x:x:x....x:.::.x:.x..:.xx:.x.x:..x..::......::x::.:...x.::...:...:..:....:.x.:...xx::.......::x:......x..:........::x.x.:x:xxx....--..x.x.x.x.x....x...:----.......--.:.:.:xx....---------.x.........:x:....-......x.....:.:.:x.......-------------------------------------...x.::.....:....::..x........:...xx...::......:...............:.:....x.......:.....x........x.....:x.:........x......x........----......:.xxx....:x.x... 277M6I165M2I20M4I7M2D12M9D18M1I25M37I127M4I22M 483/673 71.8% 727/94230402 0.0% 65/673 9.7% 39807513 NA +5706 chr4 + 190214555 86758234 86758233 86758387 154 ATTTTTAAATTATAAATTCCCAATAGATGTGCTACACAAAAGATGGAGCATAGTATCTTCACCAGAAAGGGAGATCACCTTAGTGAACCTGAAAAAAGATGCAAAGTATGGCTTGGGTAAGTCACCGTGAGATTCTTGAAGGTCTATGATTGTT chr4 - 94230402 46946080 46946079 46946233 47284170 47284169 47284323 154 ATTTAGAAATGTTGGCTTTTCAGGTGACTCTCTGCAAACAACACAGAGCAGAGTTTCCTCACCAGAAAGAGAGATCACTTTGGTGAACCTGAAAAAGGATGAAAAAATGGGCTTGGGTATGTGGCTTTAACATGGTTGAATTGTTTTGGATGTT ....xx....xx.::x..::..:xx..:x:x..:..x.x..x.::.....x...x..:...........:........:..:..............:....x...:xxx..........x..x:.:x.:.x..xx.....xxx:.x..:x.... 154M 104/154 67.5% 154/94230402 0.0% 0/154 0.0% 39812154 NA +13219 chr4 + 190214555 86758667 86758666 86759092 426 TTATTTTACAGGATTTCAAATTATTGGTGGGGAGAAGATGGGAAGACTGGACCTAGGCATATTTATCAGTTCAGTTGCCCCTGGAGGACCAGCTGACTTGGATGGATGCTTGAAGCCAGGTACTTTACATTTTGGTAGTTTTCTAAGTATTTTCTGACAGGCATGAATTTAGGAACTTAGGCCAAACTAAAATAATTGAGAAAGAGATGATATTTCTAAGATTCAGAATAAATGTATCTTTGTTGTTGAAAATACTGGATTGT--CTA----------TTTGTACAGGAGACCGTTTGATATCTGTGAATAGTGTGAGTCTGGAGGGAGTCAGCCACCATGCTGCAATTGAAATTTTGCAAAATGCACCTGAAGATGTGACACTTGTTATCTCTCAGCCAAAAGAAAAGATATCCAAAGGTA---ATGTGAATGTCTCTTA chr4 - 94230402 46947474 46947473 46947834 47282569 47282568 47282929 361 TTTTTCAATAGGCTTTCAGATAGTTGGTGGAGAGAAGACGGGAAAACTTGATCTGGGAATTTTCATTCACTCAGTTACTCCTGGAGGGCCAGCTGATGTGGAAGGATCTCTGAAACCAGGT----------------------------------GAATGGTGTGAA---------------------------------AAAGGAAAGGTATACATGA----CAGAAAAGACCAAA---------TGAGAATGTTGGATTGTATCTAAACAAACGCTTTTGTGCAGGACACCGACTGATATCTGTGAACAGCACAAGTTTGGAGGGCGTCAGCCACCACACAGCATTAGAGATTATAGAGGATGCACCTGAGGATGTAACGCTCGTTATCTCTCAGCCCAAGGAAAAGCCATCCAAAGGTATGGAGAGGAATATTCCTTA ..x..:x.:...x.....:..x:.......:.......:.....:...x..:..:..x..x..:..:x::......:.:........:........:x....x....x::....:......----------------------------------..xx..::....---------------------------------....::.x.:...x:x.:.----.....x.:.:xx.x---------...:...::........--...----------.....:.....x....x:.............:..::::...:.......x...........::.x...x.x..:...x.:x.::..........:.....:..:..:..............x..:......x:...........---.x:x....:.::.... 121M34D12M33D19M4D14M9D17M2I3M10I144M3I16M 258/346 74.6% 361/94230402 0.0% 95/346 27.5% 39811193 NA +3232 chr4 + 190214555 86762048 86762047 86762121 74 CTGCAGGCTCCGCCTCCCAGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGAGCAGCTGGGACTCCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...x.:xx:x..:.::..........x...x:xx.x........::.:..:......:...x..x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 68564922 NA +14244 chr4 + 190214555 86762714 86762713 86763203 490 TTTTGACTTTTAGTGCCTTCTACTCCTGTGCATCTCACCAATGAGATGAAAAACTACATGAAGAAATCTTCCTACATGCAAGACAGTGCTATAGATTCTTCTTCCAAGGATCACCACTGGTCACGTGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCCATCTGGGGGCCTGCGGGAAGGAAGCCTGAGTTCTCAAGATTCCAGGACTGAGAGTGCCAGCTTGTCTCAAAGCCAGGTCAATGGTTTCTTTGCCAGCCATTTAGGTGACCAAACCTGGCAGGAATCACAGCATGGCAGCCCTTCCCCATCTGTAATATCCAAAGCCACCGAGAA---AGAGACTTTCACTGATAGTAACCAAAGCAAAACTAAAAAGCCAGGCATTTCTGATGTAACTGATTACTCAGACCGTGGAGATTCAGACATGGATGAAGCCACTTACTCCAGCAGTCAGGATCATCAAACACCAAAACAGGCATAGTTTAATT chr4 - 94230402 46948090 46948089 46948582 47281821 47281820 47282313 493 TTCTGGCTTTCAGCTTCGTGCAGCACCTCACACCTCACTAATGGAACCAGGACCTATGTAAGAAGACCATCATCAGTGCAGGACAATGAAGCAGAGTCCTCTTCGGAGGAGCCTAGCAGGTCCCGTGCTCATCAGAGAGCTGTTACAGGCAGTGTATCTGCCTTGTCAGGAGGCAGGCGGGATGGGAGTGTGAGCTCCCAGGACTCCAGGACTGAGAGTGCCAGCCTGTCCCAGAGCCAGACAGCCAGCTGCTTTGGCAGACGTGCTAGTGGCAGATCCCAGCAAGATCCGCAGAAGTACCCTGACTCCCAGTCCGGGGTTTTGAAAACTAATGAGAAGAGAAGGTCGTCATCGGACAGTACTCGAGCCAAAATGAAAAGGTCGGGAGTTGTGGAGTCCGTGGAGTATTCTGACCGAGGAGATTCTGACATGGATGAAGCAACTTACTCCAGCAGTCAGGAGCAGCAGGTTGCTCAAAAGGCACAGTTTATTT ..:..:....:..:x:.x.x:.x:x.:x::..:.....:....::.:x.::.x...::.:.::.:.:.x..x.xx:....:....:..xx::...x..:.....x:....x.x:x:.x....x....x.xx:.x...:xx::.:x.:.:x.::x:x.:..xx:::..x..:...xx......x..:..:x....:..:..:..:.....................:....:..:......::x:x::.:.x.....x...x.:.x:x:...:.x:.x..::...:..x:.:...x.xx:.xx:xx:....x:..:.x::.x.:x...:.:.x:.....---.::.x.x.:xx.x..:....x:.:.:x.....:x....:.:.:..x:..x:x..xx:x::x..x..:..x.....x........x..............x....................x..x..:::xx.xx..x.....:......x.. 338M3I152M 297/490 60.6% 493/94230402 0.0% 3/490 0.6% 39814624 NA +12651 chr4 + 190214555 86764556 86764555 86764785 230 TCTAACAAGAAATCTTTGTTTG--------------TTTTTCTTTGTT---------------AAGGAATCTTCCTCTTCAGTGAATACATCCAACAAGATGAATTTTAAAACTTTTTCTTCATCACCTCCTAAGCCTGGAGATATCTTTGAGGTTGAACTGGCTAAAAATGATAACAGCTTGGGGATAAGTGTCACGGTACTGTTTGACAAGGTTTTCAAATGTTTTCTCTTCTTTAAT-TTCCAGCAGCCTATTGTAT chr4 - 94230402 46949436 46949435 46949692 47280711 47280710 47280967 257 TCTAACAAAAAATCTCttttttctttttttcttctttttttttttgtttttttgttttAAATAAAGGAATCTTCCTC---AACAAATACAGCCGACAAAATGAATTCTAAAAAGGTTTCTGCAGAACTTCTTAAACCTGGAGATATCTTTGAGGTTGAACTAGCCAAAAAAGATAACGGCTTGGGAATAAGTGTCACGGTACTGTTTGACAAGGTTTTCAGATGTTTTCTCTTTTTCTCTACTCCCATAACCCATTAAAT ........:......:.x...x--------------.....:......---------------..............---.:::......x..:....:.......:.....xxx.....x..xx..:..:...:..........................:..:.....x......:.......:..................................:............:..:xx.-:...x::.:..:...:x.. 22M14I12M15I14M3D160M1I19M 188/227 82.8% 257/94230402 0.0% 33/227 14.5% 39815120 NA +5833 chr4 + 190214555 86765367 86765366 86765492 126 AAATATTATTTTGTCTTTTTCTCTTTAGGGAGGTGTGAATACGAGTGTCAGACATGGTGGCATTTATGTGAAAGCTGTTATTCCCCAGGGAGCAGCAGAGTCTGATGGTAGAATTCACAAAGGTAT chr4 - 94230402 46951431 46951430 46951554 47278849 47278848 47278972 124 AAATCCCATTTTTGCTTT--ACTTTTAGGGTGGTGTAAACACAAGTATAAAGCACGGTGGTATTTATGTGAAAGCAGTTATTCCAAAAGGAGCAGCTGAAGAAGATGGCAAAATAGAAAAAGGTAT ....x::.....xx....--x::.......x.....:..:..:...:.x.::..:.....:..............x........xx.:........x..:xxx.....:.:...xx.x........ 18M2D106M 92/124 74.2% 124/94230402 0.0% 2/124 1.6% 39813936 NA +6450 chr4 + 190214555 86766397 86766396 86766519 123 ATTTTTATTTATGATTTGAACTGCCTAATTTTTAGGTGATCGCGTCCTAGCTGTCAATGGAGTTAGTCTAGAAGGAGCCACCCATAAGCAAGCTGTGGAAACACTGAGAAATACAGGACAGGT chr4 - 94230402 46952443 46952442 46952564 47277839 47277838 47277960 122 ATTTTTTCTCAAATGATGAATTACTTA-TTTCTAGGTGACCGTGTGCTTTCTGTCAACGGGGTTAGTTTGGAAGGTGCTACTCATAAACAAGCTGTGGAAATGCTGAGAAACACTGGGCAGGT ......x:.:.x:xxx....:.:.:..-...:.......:..:..x..xx.......:..:......:.:.....x..:..:.....:.............::........:..x..:..... 27M1D95M 92/122 75.4% 122/94230402 0.0% 1/122 0.8% 39813954 NA +19004 chr4 + 190214555 86769757 86769756 86771537 1781 CTTTTTCTCCAGAAAATACATTTGAGGTAAAATTATTTAAAAATAGCTCAGGTCTAGGATTCAGTTTTTCTCGAGAAGATAATCTTATACCGGAGCAAATTAATGCCAGCATAGTAAGGGTTAAAAAGCTCTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTGATGTAGGAGATGTTATCTTGAAAGTGAATGGAGCCTCTTTGAAAGGACTATCTCAGCAGGTGAG---------CCCCTAGCATGTGGAGTATAGCATTTTTAATGATGAGATGGATTGGCCTTTCAGAATGGTTTCATAATGCTGGTTTAACTGTACCTTCATTTGTCATTCATGGTACCCCCAGGAAGTCATATCTGCTCTCAGGGGAACTGCTCCAGAAGTATTCTTGCTTCTCTGCAGACCTCCACCTGGTGTGCTACCGGAAATTGATACTGCGCTTTTGGTGAGACTTATGAAAAGTAATTTACAGTTTTATAGAATATCAACTTAGCAACTAACTAATTCAGCTGTGGTGGTTTCATCATGAATTGTTCTCCTGGGTTTCATACCTAGCTACTTGTTTTAGGTAGGCA-----------TGTTATC--------TTG---TATGTGACAACTTCTTT--GAATGTATTCCATATTT----ATATAATAATACAAAGTAATTTATTCAATTTATTTAACTAGGA---TTTATC--------------------AAGTACTG-ACTTCAGGCATTTTA-ATGGGCACTGATACTAGTTATTATGTTG-------AGCAGGTCACAAACTGTTATTCCTCATCTGCAAAACAATGGTTAAAAATC--TCTTTAATAGGAAAATAACATTTCTGTAAGATGCATTAT---AAATAGCATTTTAAAGGACTACATTGATTTGAGGCACCAGATAGGAAAAAGTGAATGAAACTCTCTTGATGAGCGTATAAGTTG-----GTATCAGTTTTTA-------------------------------GAAAACAAT---------TTGGAAATACTT--AATTAGGCTATT----AAAAATGGCCTAT-------------------ATTCTG------------ACAGTATAGAAAATTACAAAGTAATAGAAACTCAGGTAAAAATTTACATACAAAGAAGTTCTTCTAGATTTCTATTAATAATGAAAA-----------------GGTAGAAACAACTCTGTCCAATAAAAGGAGAAGGCAGAAATAAAGGTATAGCCATCCATTGGACCATTATACA----GGTATTAAAATTG-------TTTTAAAGCATATTTAAGGACTTAAGAAAATATTTATGGTAGA-----------ACCCTAATTTTTGAG-----AGTATGAGACAAA---------------ATATATAATACTACTGTAG----------TTCTAACTTAAGGTATAAATTGTACA-----ATATTAA-----------CTGTTATTTTATATATTATTTT----CTCTATTGAACA--------TAAATTACT------TTTATCATCAGAAAATTCAATGCAT--ACTTTAGTAGAAAGTTGTTCAATGGTTTATTTTCAAATAAATGCTTCTAAA-ATTCATAGAA---------TGGTCACA-----------------------------------------------AATCTCTTTAAATG----TGTCCATTACAGACCCCACTTCAGTCTCCAGCACAAGTACTTCCAAACAGCAGTAAAGACTCTTCTCAGCCATCATGTGTGGAGCAAAGCACCAGCTCAGATGAAAATGAAATGTCAGACAAAAGCAAAAAACAGTGCAAGTCCCCATCCAGAAGAGACAGTTACAGTGACAGCAGTGGGAGTGGAGAAGATGACTTAGTGACAGCTCCAGCAAACATATCAAATTCGACCTGGAGTTCAGCTTTGCATCAGACTCTAAGCAACATGGTATCACAGGCACAGAGTCATCATGAAGCACCCAAGAGTCAAGAAGATACCATTTGTACCATGTTTTACTATCCTCAGAAAATTCCCAATAAACCAGAGTTTGAGGACAGGT chr4 - 94230402 46953620 46953619 46955613 47274790 47274789 47276783 1994 CTTCTCTTACAGAGAACACATTTGAGGTAAAGCTGCTGAAGAACAGCTCAGGTCTCGGGTTCAGCTTCTGCCGTGAGGATAATCCTACTCCGGAGCAGCTGGGCTCAACCATTGTGAGGGTGAAGAAGCTCTTCCCTGGGCAACCTGCTGCAGAGAGTGGGCAGATAGACATTGGGGACGTCATTCTCAAAGTGAATGGGGCATCGCTCAAGGGTTTATCCCAGCAGGTTAGTGATTTTTACTGTCTGTCTTTGTGGTGTAAC-----TCATGCTGTGGTAGTCCTGCACATCTTGGTGGCTCTGT----CTAAT---ACTGAACCCAAAT------------GTGGCCATAGGAAGTCATCTCTGCACTGAGGGGAACGTCTCCAGAAGTCTCTCTTCTCCTTTGTCGGCCACCGCCTGGTATACTGCCAGACATCGATCCTGCTTTGTTGGTAAGGCCTGTGGCATAAGATTCTTCTTTTT-------------------------TAATTCCTATTTGGGGGTTCATTTAT---TTGGTCTGGCGGGTTAGTTAATTAAATGCAAGATAGAGATGGAAAGATGGGGGAACTGTGCTCAGAGATGGTTGGCTCCTGTGATAAATTCCTCAGGATTATACTGAGAATTTCAAGACATGAAAAGAACGAGGACCTTTTTGTTGGTATTTTGTTTGGGGATTTTGTCTTTGCTGTTTTTTTAAAAAAAAAAATTGTATTTCAAGATTTTTAGATGGGT-----------TTACTATGCTGTTTCTGAGGCAGG--------TGTTGC------TCTGTAGCAGATAGATTTGAAGTTGATCTCAAATA-GAAACTGTAATGTGTGTGAAATGTATTCTATGAAACAGCAATTTGTCTGCTTCTTCTGGTGT-ATGCACAAG-TAGGGAAGAGACTGTTATATTTACTTGCTGGAATTTAGAGATGCCCCAAAAACAATTTTCAAAGTGTTCTAGTAGTTTAATTGGAAGAACAGGAAGACATTGCAGGATGCTTGGAAAAAGTGGAAATTAAAATATTTCTGCAAAAGAGACTGTAGAGAGGAGTTTGCCTGGAATGCTGGCTTTCCATAATGCAGGGAAGAAAGTGTAAAAGGAACAGAAGC-------AGATTTTCTATGCAAA----TTGTTTTAATTCTGTGTTCAAACTAGCAAAGCTGTTCAAGTCTGATGGCAGAAACTTAAATGTACAAATACAAAGGGATGCTAAAATTAGAGTAAGAAAAGAAGATGGACAATTGAACAAAATAATAATACAAATAACTCATCCTGTAATTCAT-TTCAAGTAC-----AAAATGCCTTTGGTAAAAGAGCACGTATATCAAAATAGGTGAGGGGGAAGCAATAGAGAAACAAGTGACAGTTTTTGTTTATAGCACTATCGCAGATTGGTATGTTCATGAATGCAAGAACTGACCATACAAGCATATATGAAGCTTTTAAAATCTGTT-TTCCTTAAATGATTTTGCAGTTCTTTAGCACAGTATATTTTAAAGTTCTGCATACTTTGTCTTGGCAAAGT----TGCATTGAACTTGGTGGAA--CTGCTCTGTGATGCA--TTCATCTAACTGGAGCTACATCTTGGTGGAAGAGGCCACTCAGTCACAGCCTTTGGTAGTTTTACGTGGTCTTTGCAACTGCAGAATTGGAGTTTAATCCATTTAAATGTCCTTGCTTTCTCTAGACTCCCATCACTTCACCCCTACAAGTGTTTCCAGATGTCAACAGAGAAGTTTCTGGTCCATCAAAGGAAGAACAGGGTGACAGCTCAGATGAAAATGAAACCACTGATTTGAGCAAGAGAAGACTGAAGTCTCCCTCTAGGAGAGACAGCTACAGTGACAGCAGCAGGAGTGGCGATGAGGAGGCGATGGACTCACTGGCACA---GTTGGGCCAGAGCTGGAATTCTGCCCTCTGCCAGCCTCCAGATGAAGCTGTGACACAGGCACACAGCCAGCACGAGGCACACAGTGCTCAGGGCGGTGCTCTTCGCACCATCTTGTATTCTGCGCGTGAGACTCCTAGCAGGTCAGAGCTTGAGGACAGGT ...:.::.x....:..:..............::.::.x..:..:...........x..:.....:..:.x:..x..:.......:..:x........:x.x:::x.x.x...x..:.....x..:........:.....:..:..x..x.....:.....:x.:..x..::.x..:..:..:..::.x...........:..x..x:.x..:..x:....:........x..---------.:x::x.:x.x..x:..:..:.-----.x...x..x.:.:.x::x..x:x..xx::...:.:::.----..::.---....x...:xx..------------..:x..x:..........x.....x..x........xx..........x.:::.x..:..:..:x.:..x..:......:.:..:..:..x..:...x....x:.x.....:..:.:.:..:x.x:x:...:x:xx....-------------------------......xxx.x...x....:xx.:..---...x...xx:.....xxx..x:..:x.:.xx.x.xx..:.:.:x.-----------...xx..--------...---:x.....:..x...:.:--..x.:..:.xx:x....----.:..:.x..x.xx:..x.x:..x..xxxxx.....x::.x..:---...:..--------------------..:x.:..-.:....:.xx.....-.....:-----------...:....:..-------:.....--------....::------....:.:x.x.xx.:..x:..:.:--...:x....-....x.:xx..x.x...:.:...:...x.---...:....x...:xxx.x:.x:x:..:.x.-.x....x..-....:..:..xxx:.x.x.:.:x....x..::xx.xx:..x..-----:x.x..:....:.-------------------------------...:...x.---------.......x.x.x--.....::x....----x....x:.x..:.-------------------..x...------------:...x:x.....:.xxx....x..:....:.-------.:.x...x:..:....----..x..:..:x.:.x.:..x.x.x.::x..-----------------..:......xxxxx...x...xx.x.:::.:.x..x:....x.::...x::xx.xxx:x.....x...:x...----::..x..x..x.:-------:.x...xx...-..:...x..-----.....:::.x.....:.-----------.:.xx...xxx....-----..:.xx...x...---------------:.x....::....::.:..----------.:x.:.x.xx.:.x.:x:.:::....-----....x..-----------.....-..::x..x..x.....----:...x.x.x...--------....x.x..------...:..x.x:x...:.----.....--.x:..:..:...--:..:..x:..:.x:.--....xx...x..xxx...x.-x..x:.:...---------::......-----------------------------------------------....:x........----..:::x:.x:....:..xx.:xxx..x..xx:......::.....:.::x..::.:...xx:....x:x......x:x.x:..:..::.::x....................:xx.x..:xx:.....:.:.x:::xx.....:..x..:..:........:..............::.......x..x..x..xx:::..:xxx.x.::...x.---:.::::::x..x.....:...x..::.x:::...x...:.::::.x::x..:x..........x..:..x..:..:....x..:x:x...:.:x.:.:.:x..:.:.....x..x..:.x.x.x.:x:.:.:...:.::.:::.....:............ 232M9I22M5D38M4D5M3D13M12D140M25D26M3D45M11I7M8I3M3I17M2I17M4I43M3I6M20I8M1I15M1I6M11D11M7I6M8D6M6D24M2I9M1D29M3I30M1D9M1D43M5I13M31I9M9I12M2I12M4I13M19I6M12I31M7D16M4D29M17I73M4I13M7I11M1D9M5D17M11I15M5I13M15I19M10I26M5I7M11I5M1D16M4I12M8I9M6I16M4D5M2I12M2D15M2D20M1I10M9I8M47I14M4I215M3D161M 1061/1672 63.5% 1994/94230402 0.0% 431/1672 25.8% 39816137 NA +10664 chr4 + 190214555 86774354 86774353 86774537 184 TACTGCTTTTTTCCCTTAGGAAGTAGAACTCCTCATTACCCTAATTAAATCAGAAAAAGGAAGCCTGGGTTTTACAGTAACCAAAGGCAATCAGAGAATTGGTTGTTATGTTCATGATGTCATACAGGATCCAGCCAAAAGTGATGGAAGGCTAAAACCTGGGGACCGGCTCATAAAGGTGAGA chr4 - 94230402 46957196 46957195 46957379 47273024 47273023 47273207 184 TGCTACTTTCTTCCCCTAGGAAGTAGAACTCCAGGTCACCATGACCAAGTCTGAAAAGGGCAGCCTGGGCTTTACGGTGACCAAAGGGAACGATAACGTGGGCTGCTACATTCATGACATTGTTCAGGATCCTGCCAAAAGTGATGGGAGACTGCGACCTGGGGATCGACTCATAAAAGTGAGA .:..:....:.....:................xx:.:...x.:.::..:..x.....:..x........:.....:..:........x..:x.x.:x:.x..:..:..::.......::.::.x........x..............:..:..:x:.........:..:........:...... 184M 139/184 75.5% 184/94230402 0.0% 0/184 0.0% 39817158 NA +20051 chr4 + 190214555 86775157 86775156 86775742 586 TCTTGTTTTTGTAGGTTAATGATACAGATGTTACTAATATGACTCATACAGATGCAGTTAATCTGCTCCGGGCTGCATCCAAAACAGTCAGATTAGTTATTGGACGAGTTCTAGAATTACCCAGAATACCAATGTTGCCTCATTTGCTACCGGACATAACACTAACGTGCAACAAAGAGGAGTTGGGTAATGAAAAGTCAAA------CTTTGTAC-AATATGATT-TTCTTGGTTAGCTTAAGAGTAAGTACT---TTTATGACTGAGAAAACAAATATTTTCTATTATTTC-----AAGGTTTTTCCTTATGTGGAGGTCATGACAGCCTTTATCAAGTGGTATATATTAGTGATATTAATCCAAGGTCCGTCGCAGCCATTGAGGGTAATCTCCAGCTATTAGATGTCATCCATTATGTGAACGGAGTCAGCACACAAGGAATGACCTTGGAGGAAGTTAACAGAGCATTAGACATGTCACTTCCTTCATTGGTATTGAAAGCAACAAG--GTACTCTGCAATTATTTATGAGTTTTGATTGTGCGTGTGTGTGCATTTCAGGTCATTGATTATACTTCATTCTCTGAAAATATATTACTG chr4 - 94230402 46958401 46958400 46958988 47271415 47271414 47272002 588 TTTTGTCTTCACAGGTGAACGACATTGATGTCACCAACATGAGTCATACAGATGCAGTCAGCTTTCTCCGTGCTGCCCCAAAGACTGTCAGATTGGTTCTAGGACGTGTGTTGGAGTTACCCAAGATGCCAGTATTACCTCACTTGCTGCCTGATATTACGCTAACGTGCCATAAAGAGGAGCTAGGTAATAGAGAATTTTAGTGCTCTTTCATGCTAGTGTGATTATTTTTCTTAAGTTCCAAAGAAAGCATTCGATTTTTGTTTATTAACTTATTTATTTATTGCTTCTTCCTGCACAGGGCTGTTGTTAGCAGGAGGTCATGACAGCATTTACCAAGTTGTGTATATCAGTGACATTCTCCCCAGATCAGCTGCCGCCAGAGAGGAGAGTCTCCGTGCACTAGATATTATCCATTACATTAATGGGGTCAGCACACAAGGAATGACACTGAAAGAAGCCAAAAGAACATTGGAAACATCCCTTCCTTGGGTCGTGCTCAAAGTGACCAGGTGTGTTCTGGAACTGCATG-----TTTCCCTGTACTTAT---TGCTTTTC---TCCCTGATTATATGTGGTT-----AAAACGTGTTCCTG .:....:..:::....x..:..:.:x.....:..:..:....x...............:.:::.x.....x.....x:.x..:..x........:...x.x.....x..x:.:..:.......::..:...:.:..:.....:.....:..x..:..x..:.........x.:.........:.:......::.:.:.:xx.------:..::.:.-.:.:.....-..:..xx.x..:.:x.:..x...:.:.---...x..x:.:xx..xx:.xx.....x:.::.x:...-----x...x:.x.:x...xxx...............x....:.....x..:.....:.....:...xx:..x..:..x.::..x....xx....:x.:.....:xx:.:.....:.:........::.x..:..:....................x:..:.:....::..x...:....:..x.::..x.......x:x.x..::.x....::..x..--..::....x..:.::x.:-----...xx:...:.x.:.---...x....---..x:........:x.x:..-----....::.:..x... 202M6I8M1I9M1I27M3I36M5I214M2I18M5D15M3D8M3D19M5D14M 391/570 68.6% 588/94230402 0.0% 34/570 6.0% 39816756 NA +3570 chr4 + 190214555 86781948 86781947 86782031 84 CATGACTCTGTCGAAAAAAAAAAAAAAGAAAAAGAAATTAGC--TTTTTCCTTGGGATAAACCCAAAAATATTAGAGGTTTGGAAT chr4 - 94230402 40001486 40001485 40001571 54228832 54228831 54228917 86 CATGGCTCTCTGGAAAAAAAAGAAAAAGAAAAAGAAAGCTGCATTTTATCTTTGGAAAATACAGAAAAATAGCAGCAAATCGGGAT ....:....x.x.........:...............x:x..--...x..:....:.x.x..xx.......x:..x::x.:..:.. 42M2I42M 62/84 73.8% 86/94230402 0.0% 2/84 2.4% 46780462 NA +5049 chr4 + 190214555 86785217 86785216 86785349 133 TATTATTT--TTCAAGAATCTTATATACAAGAAGATGACATTTATGATGATTCCCAAGAAGCTGAAGTTATCCAGTCTCTGCTGGATGTTGTGGATGAGGAAGCCCAGAATCTTTTAAACGAAAATAATGCAGCA chr4 - 94230402 46962611 46962610 46962745 47267658 47267657 47267792 135 TACTATTTCATTTTAGAAGCAGAGGTTCCAGATGATGAATATTACGATGAAGATGATCACAATGATGTAGTCCAGTATCTGTTGGATGTTGTAGATGAGGAAGCCCAGAACCTCTTAAATCGTAACAATGCAACA ..:.....--..:x....x.xx.x:.x.x...x.....xxx...:.....xxx:x.xx.x:x...x..x:......x....:..........:.................:..:.....:x:x..:......:.. 8M2I125M 94/133 70.7% 135/94230402 0.0% 2/133 1.5% 39822606 NA +5180 chr4 + 190214555 86785851 86785850 86785940 90 CATTAAAGATGAATGGGAAGTTATCAGAAGAGAGAACAGAAGATACAGACTGCGATGGTTCACCTTTACCTGAGTATTTTACTGAGGTAA chr4 - 94230402 46963558 46963557 46963647 47266756 47266755 47266845 90 CAGTGGAGATGAATGGGAAACTGGCAGAAGATAAGTCTGAAGACACAGACTGTGATGGCTCATCTTTACCTGAAGATTTTTCAGAGGTGA ..x.::.............::.:x.......x.::x.x.....:........:.....:...:..........:x.....x.x.....:. 90M 69/90 76.7% 90/94230402 0.0% 0/90 0.0% 39822293 NA +4307 chr4 + 190214555 86799127 86799126 86799214 88 AGACTGATGATGATGAAATAACATGGGGAAATGATGAGTTGCCAATAGAGAGAACAAACCATGAAGATTCTGATAAAGGCAAGAATTT chr4 - 94230402 46965499 46965498 46965586 47264817 47264816 47264904 88 AAGCAGATGAAGATGAAATCACGTGGGGAAGTGATGAATTGCCAATTGAATCAATCAGCCAGGAACGTGTAAATAAAGGCAAGAGCTT .::.x.....x........x..:.......:......:........x..:xx..:x.:...x...x:.x:x:............::.. 88M 64/88 72.7% 88/94230402 0.0% 0/88 0.0% 39833628 NA +3270 chr4 + 190214555 86800630 86800629 86800733 104 TGATAGAGTGAGATCCTGTCAGAAAGAAAGAAAGAGAGAGAGAGAAAGAGAGAGAAGGAGAGAAGGGAAGAAAGCAGGGAGGGAGGGAGGGAGGAAGGAAGGAA chr4 - 94230402 76099057 76099056 76099160 18131243 18131242 18131346 104 TGTTAGCATTTGCTCCTGATAGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAA ..x...x:.xx.x.....x:...:.:.:....:::.x...:.xx:::...:...x:::::....:..::..:xx.::.....x...:..:..:...x...::.. 104M 61/104 58.7% 104/94230402 0.0% 0/104 0.0% 10701573 NA +3371 chr4 + 190214555 86803132 86803131 86803221 90 AGGTACACACACACATATACATGTATTTTTTATATATACACATACATACATATATATTTAT----TGTGTATATATATACACACACATATATAC chr4 - 94230402 67999848 67999847 67999941 26230462 26230461 26230555 94 AGTCAGATACAGATTTTTACTCATGCTCTGTATGTGGACACACACATGCATATATATTCATGCACTATATATATATATGCACACAGAAACAGAC ..x:.x.:...x.:x.x...x::.::.:.x...:.:x.....:....:..........:..----.:.:.........:......x.x.:.x.. 61M4I29M 62/90 68.9% 94/94230402 0.0% 4/90 4.4% 18803284 NA +3000 chr4 + 190214555 86803155 86803154 86803225 71 TATTTTTTATATATACACATACATACATATATATTTATTGTGTATATATATACACACACATATATACATAT chr4 - 94230402 6951611 6951610 6951681 87278722 87278721 87278792 71 TATTTGTTATCTACACATTTATAGTCAGCTATTTCTATCATATATATATACACATATACACACGTATGTAT .....x....x..:...:x..:.xx..xx...x.:...::.:........:...:.:...:.::..::... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 79851544 NA +3338 chr4 + 190214555 86803182 86803181 86803295 114 TATATATTTATTGTGTATATATATACACACACATATATACATATATATTTATTGTGTATATATATAGAATATACACACACACATATATAAA---TATATAAAATAAATAAAATAAAA chr4 - 94230402 69706439 69706438 69706555 24523848 24523847 24523964 117 TATAAGATTATTATATATATATACACACACAAGTAAACATATATATATGCCTGTTGTATTTTCATGTTATTTATATACAAATAACAATCAATGCTATTCCAAACAAAGAAGACAGAA ....x:x.....:.:........:.......x:..x.:.:........x:x.xx.....x.x:..:xx..x..:.:...x.:.xxx..x..---...x:x...:...x..:.:.:.. 91M3I23M 75/114 65.8% 117/94230402 0.0% 3/114 2.6% 17096743 NA +3202 chr4 + 190214555 86803219 86803218 86803307 89 TACATATATATTTATTGTGTATATATATAGAATATACACACACACATATATAAATATATAAAATAAATAAAATAAAATAAAGACCTTCC chr4 - 94230402 84413034 84413033 84413121 9817282 9817281 9817369 88 TACGCTCACAACCATTGCATACCT-TAGAGTGTACACACACACATACATCTAAATACATAAAACAAATAAACAAAAAGAATAAACTACC ...::x:.:.x::....::..:x.-..x..x:..:.........:.:..x......:......:.......xx....x..x:.x..x.. 24M1D64M 60/88 68.2% 88/94230402 0.0% 1/88 1.1% 2390185 NA +7859 chr4 + 190214555 86805264 86805263 86805400 137 ATGTTTTGCTTACAGAATCTTCAAGAATTAAAACCTTTGGATCAGTGTCTAATTGGGCAAACTAAGGAAAACAGAAGGAAGAACAGATATAAAAATATACTTCCCTGTAAGTTCCAGTTTGGCTTCAGATTTAATAT chr4 - 94230402 46968008 46968007 46968143 47262260 47262259 47262395 136 ATTCTTTCCCTACAGAATCTTCAAGAGTTAAAACCATTGGATCAGTGTTTGATTGGACAAGCAAAGGAGAACAGGAGGAAGAACAGATACAAAAACATCCTCCCTTGTGAGTATTAA-TTGGTCTGACATTCAGTGT ..x:...x.:................:........x............:.:.....:...:.x.....:.....:..............:.....:..x..:..:...:...x::.:-....::.x.x...:.:.:. 117M1D19M 106/136 77.9% 136/94230402 0.0% 1/136 0.7% 39837256 NA +20672 chr4 + 190214555 86807516 86807515 86807915 400 ATGCATGATATGGATGGCTCTGTTTTGTGGTGGAAAATTCACAGATGATGCTACAAGAGTGCCTCTTGGAGATGAAGGTGGCTATATCAATGCCAGCTTCATTAAGATACCAGTTGGGAAAGAAGAGTTCGTTTACATTGCCTGCCAAGGACCACTGCCTACAACTGTTGGAGACTTCTGGCAGATGATTTGGGAGCAAAAATCCACAGTGATAGCCATGATGACTCAAGAAGTAGAAGGAGAAAAAATCAAATGCCAGCGCTATTGGCCCAACATCCTAGGCAAAACAACAATGGTCAGCAACAGACTTCGACTGGCTCTTGTGAGAATGCAGCAGCTGAAGGGCTTTGTGGTGAGGGCAATGACCCTTGAAGATATTCAGGTAAGTGAATGAAATCTT chr4 - 94230402 46968769 46968768 46969165 47261238 47261237 47261634 397 ATGCCTAACATTAAAGTATTTCTGTTGTGTTGGAAA---TGCAGATGATACCACCAGAGTTCCTCTTGGCAGTGAAGGTGGATACATCAACGCCAGCTTCATTCGCATGCCAGTGGGGAATGAGGAGTTTGTCTACATCGCTTGTCAAGGACCTCTCCCCACTACTGTAGCAGACTTCTGGCAGATGGTTTGGGAGCAAAACTGTACTGTGATCGCCATGATGACTCAGGAGGTTGAAGGAGAGAAGATAAAATGCCAGCGTTACTGGCCAGATGTGCTCCATAAAACCACCATGATAACAGACAGACTGCGGCTGGCTCTTGTAAGGTTTCAGCAGCTGAAGGGCTTCATCATCAGAGTGCTGGAGCTAGAAGAGATCCAGGTAAGTGAGTCTGATTTT ....x.:.:..x:.x.xx.:.x.x.....x......---::........:.:..x.....x........x::.........x..:.....:............x:x..:.....x.....x..:.....:..:.....:..:..:........x..x..:..x.....x.x................:.............x.x:..x.....x..............:..:..x........:..:..x...........:..:.....x:.::.x..xx::.....x..x...:.x.xx:.......x..:...........:..:x.x.................::.x:.x..:.::x..:xx..x.....x..:...........:.xx:..:.. 36M3D361M 299/397 75.3% 397/94230402 0.0% 3/397 0.8% 39838747 NA +15650 chr4 + 190214555 86809727 86809726 86809992 266 TATAACATGTCATGATCCACTTATTCTGTTATACAATTTCAGACCAGAGAGGTGCGCCATATTTCTCATCTGAATTTCACTGCCTGGCCAGACCATGATACACCTTCTCAACCAGATGATCTGCTTACTTTTATCTCCTACATGAGACACATCCACAGATCAGGCCCAATCATTACGCACTGCAGTGCTGGCATTGGACGTTCAGGGACCCTGATTTGCATAGATGTGGTTCTGGGATTAATCAGTCAGGATCTTGATGTGAGTAC chr4 - 94230402 46969650 46969649 46969912 47260491 47260490 47260753 263 TGTAACATTTT-TGTTCCTGCTATT--GTTGTTAAACCTCAGACAGGTGAGGTACGGCAGATTTCCCACCTGAATTTCACTGCCTGGCCTGACCATGACACCCCTTCTCAGCCAGACGACCTGCTGACGTTCATCTCCTACATGCGGCACGTCCACAGATCGGGACCCATCGTAACGCACTGCAGTGCGGGCATTGGCCGCTCAGGGACCCTGATTTGTATCGACGTAGTTCTGGGGCTCATCAGCAGAGACCTTGATGTGAGTAC .:......x.:-..x...xx:....--...:.xx..::......x:.x.....:..x..x.....:..:....................x........:..x........:.....:..:.....x..x..:............x.:...:..........:..x..x...:.x..............x........x..:.................:..x..:..:........::.x.....:x::..:.............. 11M1D13M2D239M 211/263 80.2% 263/94230402 0.0% 3/263 1.1% 39840077 NA +4435 chr4 + 190214555 86811028 86811027 86811115 88 TGTGGTTTCCTCTGACAGTTTGACATCTCTGATTTGGTGCGCTGCATGAGACTACAAAGACACGGAATGGTTCAGACAGAGGTGAGTC chr4 - 94230402 46970559 46970558 46970646 47259757 47259756 47259844 88 TGCTGTTTATTTTGGTAGTTCGACATCTCGGACCTGGTGCGCACAATGCGTCTGCAGCGGCATGGGATGGTGCAGACTGAGGTGAGTC ..:x....x:.:..::....:........x..::........xxx...x.x..:..:x.:..:..:.....x.....x.......... 88M 64/88 72.7% 88/94230402 0.0% 0/88 0.0% 39840469 NA +10058 chr4 + 190214555 86814454 86814453 86815144 691 AGGATCAATATATTTTCTGCTATCAAGTCATCCTTTATGTCCTGACACGTCTTCAAGCAGAAGAAGAGCAA-AAACAGCAGCCTCA---------GCTTCTGAAGT---GACATGAAAAGAGC------------------CTCTG-------GATGCATTTCCATTTCTCTCCTTAACCTCCAGCAGACTCCTGCTCTCTATCCA-----------------AAATAAAGATCACAGAGCA---------GCAAGTTCATACAACATGCATGTTCTCCTCTATCT-TAGA---------GGGGTATTCTTCTTGAAAATAAAAAATATTGA--AATGCTGTA--TTTTTACAGCTACTTTAACCTATGAT-----AATTATTTACAAA-ATTTTAAC-ACTAACCAAACAA-------------------------TGCAGATCTT---------------------------AGGGATGATTAAAGGCAGCA-TTTGATGATAGCAGACATTGTTACAAGGACATGGTGA--GTCTATTTTTAATGCACCAATCTTGTTTATAGCAA--AAATGTTTTCCAATATTTTAATAAAGT---AGTTATTTTATAGGGGATACTTGAAACCAGTATTTAAGCTTTAAATGACAGTAATATTGGCATAGAAAAAAGTAGCAAATGTTTACTGTA------TCAATTTCTAATGTTTACTATATAGAATTTCCTGTAATATATTTATATACTTTTTCATGAAAA---------TGGAGTTATCAGTTATCTGTTTGTTACTGCATCATCTGTTTGTAATCATTATCTCACTTTGTAAATAAAAACACACCTTAAA chr4 - 94230402 46971231 46971230 46972055 47258348 47258347 47259172 825 AGGATCAGTACATCTTCTGCTATCAAGTTGTCCTGTATGTCCTGAATCATCTCCAGCACGAAGAAGAGAGGCAAATAAAATCCTGAACTGGAAGTGCTTTTAAAATAAGGAAGTGAGGAGACCTGAAGGCTCTCACCCGTTCTTTGTTCTGCCAATGCTATCAAAGTCCTTTTCTTCAGCTGCTGTCAAATGTT-TTCTCTGTCTATCTCTGTGTGTCACTGCAGATAAGGTACATAGTGCACGGACAAAGGAGAGCTCATACCGTACCACTGGTGTCTTCAGCCCGTGGACACAGCTGTGAGATATTTGTA-TAACAGTAAATAATATTTAATAAAGCTGCATTTTTTTGCAGCTTCCTTAATACGTGATTCAGCACTCaaataaaaatattttaatgaaaaaaaaaataaaaGAAAACTCATGTTAAAATACTCCTGCAGCTCTGCAGCTGCTCTGGAGTATTTGTTTCGTAGGGGGTGGGATAAAGCAGTATTTTTGTCCTGGCAAACTTCATTACCATGCCATTTTAATGGTCTCTTCTAA-------AAGCTTGTGTATGGCAACCGAAGGTTTT--GGCCTTTTAGTACAGTTGGAGCTATTTTATAGATGGTATCTTAAATCAGTATTTAAGCTTTAAGAGCTGCC--TGTTAGTGTA-AGGATAGTGGTGACTGTTTACTGTAAGTATCGCAGTTAACAATGTTTACTTGATAGAGTTCCATGT-ACATATTTATATACTTTTACAAAAAAAAAAAAGAAGTTGAATTATCAGATGTCTA------ACTTTATAACTTATTAGGCATCTCT-----ACTCTGTAAATAAAAATACACTTAAAA .......:..:..:..............::....x..........xx.:...:..:xxx.........x::-...:.:x.x...x.---------....:.:..:.---..x:...::...x.------------------..:..-------:....xx.:xx.x.:..:.:...x.x..x.x.:x:.x.x:.-:.....:..:.-----------------.:....:.xx..:..x...---------.x:..:......x::.:xxx..x.x..:..x::.:-.:..---------.:.:....:x.x-.:.x.:....x......x.--..x....:.--.....:.....x.:....:x::....-----.x.:.xx..x...-.......:-.xx..xx...:..-------------------------.....x...x---------------------------:...:..:xxx..:....:.-...x:.xx.:...:..x.::....x.x.x...xx.:.--....x..:.x.-------..x.....x...:....--:..x.....--:::x.....:..x...---..:..........:x.:..::.x...:.................:x.x::x:--.:..:.::..-.::.x...:.::.x...........------x..:..xx:..........xx.....:..:.x...-.:................x..x:....---------.x..:.......x.:...:------...x:..x.::.:..x.xx...x:.-----...:............:....:.x... 71M1I14M9I11M3I14M18I5M7I41M1D11M17I19M9I35M1I4M9I12M1D19M2I9M2I26M5I13M1I8M1I13M25I10M27I20M1I37M2I11M7D17M2I9M2D16M3I52M2D10M1D25M6I35M1D27M9I19M6D25M5D27M 458/665 68.9% 825/94230402 0.0% 186/665 28.0% 39843223 NA +3433 chr4 + 190214555 86837177 86837176 86837260 84 AGGAAGAAGAGCCCA-TGGTGCATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237676 9237675 9237760 84992643 84992642 84992727 85 AGGAACAAAAGCTCAGCTGAGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .....x..:...:..-:x.x.x:x:..x..x.:......:..:x..x.:...:.....:....:....:..:...:....::... 15M1I69M 58/84 69.0% 85/94230402 0.0% 1/84 1.2% 77599501 NA +3062 chr4 + 190214555 86846734 86846733 86846793 60 TATCTATATATGTGTGTGTGTGTTTGAGTGTGTGTACATATATATACATATATATACAGT chr4 - 94230402 32959572 32959571 32959631 61270772 61270771 61270831 60 TACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGT ..:.....:...x....x.....x:.x.:..:.:..........:.x......x:.::.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 53887162 NA +3276 chr4 + 190214555 86851885 86851884 86851938 54 AAAAAAAAAAAAAAAAAAGTAGTGTTATCAGAATTTCTCAAAAGAATTAGGATG chr4 - 94230402 67033680 67033679 67033733 27196670 27196669 27196723 54 AAAAAAAAAAAAAAAAAAGTATTTTTAGCAGAGTTTTCTAAAAAAATAAGAGTG .....................x.x...x....:...:::....:...x..::.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 19818205 NA +3023 chr4 + 190214555 86871330 86871329 86871376 47 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGGAAAGAGAAAAAAAAAGA chr4 - 94230402 32280614 32280613 32280660 61949743 61949742 61949789 47 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGA .............................x.xx.::..:..x..:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 54590716 NA +3067 chr4 + 190214555 86893985 86893984 86894043 59 CTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.......x.:xx...x.xx.x........:..:.........:......x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 68696846 NA +3039 chr4 + 190214555 86902403 86902402 86902471 69 ACAGAATGAGACTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAGGGAATGA chr4 - 94230402 61014045 61014044 61014113 33216290 33216289 33216358 69 ATAAAGTACAACTTTCAAAAGAAGAAAACAAAAAATAAAAGGGAAAGAGAAGACAAAATAGGGCAAAGA .:.:.:.:x:...:......:..:....x......x.....::.:.:....::x....x.:..x..x.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 25888358 NA +4155 chr4 + 190214555 86911762 86911761 86911902 141 CTGCAGCCTTAACCTTCTGGGCTCAAGTGATCCTCCCACCTCAGCCTTCCAAGCAGCTGGGACCACAGGCATGCACTATCATGCCTGGCTATTTAGAAAAAAAAAATGTTTTTTTGAGACGGAGTTTTGCTTTTTGTTGCC chr4 - 94230402 18197126 18197125 18197264 76033139 76033138 76033277 139 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTATCATCCTTTCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCC ..:.....:x..x........:.......x.:.x.xx:x.........:....:......:..:...--.:.....:.:::..:x.x:::x...x:x:.x.xx.x..::...::::.:x.:.:x:::.:x.:...::.... 67M2D72M 84/139 60.4% 139/94230402 0.0% 2/139 1.4% 68714636 NA +3156 chr4 + 190214555 86912142 86912141 86912209 68 TGGGATTACAGGCGTGAGCCACTGCACTCAGCCATTTAAAAAAACAAAAACAAACAAACAAACAAAAC chr4 - 94230402 71715577 71715576 71715642 22514761 22514760 22514826 66 TGAGCTCAAAGGCCTGAAATACTTGTTT--ACCATTGGAAAAAACAAAAACAAACAAACAAACAAAAC ..:.x.:.x....x...:x:...xxx:.--:.....x:.............................. 28M2D38M 51/66 77.3% 66/94230402 0.0% 2/66 3.0% 15196565 NA +3026 chr4 + 190214555 86912702 86912701 86912768 67 GTGCATGTATACACACACACATGAGCATATAGATATGTATATGAGTGTATACATATAAATGTGTATG chr4 - 94230402 71630138 71630137 71630204 22600199 22600198 22600265 67 GTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTG .......:...:.........x:x::.:...xx.x.....:::x....x.:...:.:...:...:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 15282564 NA +3162 chr4 + 190214555 86917391 86917390 86917469 79 AGGAAGGAGAGAGAAAGAGAGGAAGAGAGAGAGAAAGAAAAAGAAAGGGAGAGAAAGAGAAAAAGAAAGAA---AGAAAAGA chr4 - 94230402 36691892 36691891 36691973 57538430 57538429 57538511 82 AGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA ....:.::.:::.:..x.:.........:.:x:.x..:.::.:::......x...::........x..x..---....:... 71M3I8M 53/79 67.1% 82/94230402 0.0% 3/79 3.8% 50225499 NA +3299 chr4 + 190214555 86917412 86917411 86917546 135 GAAGAGAGAGAGAAAGAAAA--AGAAAGGGAGAGAAAGAGAAAAAGAAAGAAAGAAAAGAAAGAA---ATAAAGAAAAAGAAAGGGAGA--------GAAAGAAAGAGAAAAAGAAGAAAGAAAAGAGAGAGAAAGAGAAAGAAAAGT chr4 - 94230402 72821452 72821451 72821597 21408806 21408805 21408951 146 GGGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAAC--CAGTAAAAAGGAAAATAAAAGT .::..:..:x.::.......--...xxx.x..x...:xx:.::::....................---x.x:x::::.:..::...:..--------........:...x...:x........x--x::x.:....::...x...... 20M2I43M3I21M8I27M2D22M 88/133 66.2% 146/94230402 0.0% 15/133 11.3% 14095960 NA +3929 chr4 + 190214555 86917464 86917463 86917586 123 AAAAGAAAGAAATAAAGAAAAAGAAAGGGAGAGAAAGAAAGAGAAAAAGAAGAAAGAAAAGAGAGAGAAAGAGAAAGAAAAGTAAGG-AAGGAAGAGAGAGTGAGGGAGGGAGGAAGGAGAAGG chr4 - 94230402 30533165 30533164 30533286 63697117 63697116 63697238 122 AATAAAAAGGAAGAAAGAAAAG--AGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..x.:....:..x........:--.:............xx.x.......x.:.::xxx....x.:...xx..:.x....:.:.:...-..::......:.:::xx...::.::..:.:.x..:. 22M2D63M1I36M 80/121 66.1% 122/94230402 0.0% 3/121 2.5% 56384299 NA +3301 chr4 + 190214555 86917479 86917478 86917543 65 AGAAAAAGAAAGGGAGAGAAAGAAAGAGAAAAAGAAGAAAGAAAAGAGAG---------AGAAAGAGAAAGAAA chr4 - 94230402 9237710 9237709 9237783 84992620 84992619 84992693 74 AGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAA ...:....:x..x.:...:.....:..:......:.:...:.....:...---------...x:.:........ 50M9I15M 50/65 76.9% 74/94230402 0.0% 9/65 13.8% 77679769 NA +3272 chr4 + 190214555 86949112 86949111 86949187 76 AAAGAATTGTTATCACTGATTAGTTTTTATTTAAAGTATTAGCTATTCAAAAATATATATATATATATATTTTTTT chr4 - 94230402 7737126 7737125 7737201 86493202 86493201 86493277 76 AAGAAATTGGCTTGAATAATTATTTTTATTTTAGTGCATTTACCAATTAAAAAAACATATATATATATGTTTTTTT ..::.....x:x.x.x.:....x....xx....:x.:...x:.:.x.:.....x.:............:....... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 79211986 NA +3133 chr4 + 190214555 86972125 86972124 86972178 54 TTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTGAAGAGCAGAAAAG chr4 - 94230402 4848322 4848321 4848375 89382028 89382027 89382081 54 TTATCTTGGACCAAAAAAAAAAACAAAAAAAAAGAAGTTTGGAAGGCAAGAAAG ..:...:::.xx...........x.........:.......:.::...::.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 82123803 NA +4037 chr4 + 190214555 86972613 86972612 86972692 80 CTGTAACCTCCATCTCCTGGGTTCAAGTGATTCTCTTGCCTCAGCCTCTCAAGTAGCCAGGATTACAGGCGTGCACCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACT ..::.:..:xx.x..:.............x...x.xx.x........:.........::.:.:....--........... 67M2D11M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% 68775487 NA +3071 chr4 + 190214555 86973698 86973697 86973814 117 AGTTAACGTTTTCTTTCTTTTCTTTTCTTTTTTCCTTTCTCTTTTCTCTTTTCCTTTCTTTTTTTTCTTTTCTTCCTTTCTTCCTTTCCTTTTTCCTTTCCCTTTTCCTTTCCCTTT chr4 - 94230402 72415597 72415596 72415713 21814690 21814689 21814806 117 AGTTAATTTTTTGCTAGTTGTGTTTGATAATTTTCTCTCTTTTTGCTCTATATTTCTCTGGCTATTCTTTTATGTTTTTCTTTCTTTCCCTCCCTTTGGTGCTCTGCAGTTTCTTTT ......:x....x:.xx..x.x...xx.xx...:..:...:...x....x.x::.:...xx:.x.......x.x::......:......:.:::::.xx:x..:.x.xx..:.:... 117M 71/117 60.7% 117/94230402 0.0% 0/117 0.0% 14558101 NA +3066 chr4 + 190214555 86974223 86974222 86974295 73 CTGCAACCTCTGCCTCCCAGCTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTGGCTGGAGTTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.::.x........x...x.xx.x........::.....:......::....x.::.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 68777097 NA +3325 chr4 + 190214555 86975326 86975325 86975399 74 CTGCAGCCTTGACCTCCTGGGCTCAAGCCATACTCCCACCTCCACCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.....:xx.x.x.xx:x...x:...::...........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 68778200 NA +3362 chr4 + 190214555 86982337 86982336 86982424 88 GAAATTATATGACAAGAAGAAGGCAAGCGCTGTTCA-------AAGAAAAAAAATTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAGT chr4 - 94230402 28120136 28120135 28120229 66110174 66110173 66110267 94 GAGACTAT-TGACACAGCAAAGGTGAACAATTTTTGGCTGGTGAAGAAGAAAGATTGATTCTTCTACTTTTTTTTTTTTCTTTTTTCTACAAAAT ..:.:...-.....x::x:....::.:.:x.x..::-------.....:...:....::.:..:.x:............:......:......:. 8M1D27M7I52M 61/87 70.1% 94/94230402 0.0% 8/87 9.2% 58862201 NA +3015 chr4 + 190214555 86982376 86982375 86982436 61 AAAAAAAATTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAGTGCTGTAGTCTGT chr4 - 94230402 32212629 32212628 32212689 62017714 62017713 62017774 61 AAAGATAGTTGACTTTTTGTTGCTTTTTTTTTTTTTTTTTTCTCAGAGCATTGCCTTTTGT ...:.x.:...:......x..x:..................:x..:..:::..:xx.:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 54769747 NA +4070 chr4 + 190214555 86996987 86996986 86997070 84 CTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGCCCACCACCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGT ..:..:..:xx:x..:.:...........x...x.xx.x........:............:.:....x...--......::... 71M2D11M 62/82 75.6% 82/94230402 0.0% 2/82 2.4% 68799861 NA +3073 chr4 + 190214555 87017064 87017063 87017111 48 TATATATATGTGTGTGTGTGTATGTGTATATATATGTGTTTTTTTTTT chr4 - 94230402 27034826 27034825 27034873 67195530 67195529 67195577 48 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCT .........:...........:..........:x.x.x....::..:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 59982238 NA +3094 chr4 + 190214555 87017074 87017073 87017126 53 TGTGTGTGTGTATGTGTATATATATGTGTTTTTTTTTTTTTTTTTTTTGGTTG chr4 - 94230402 15882773 15882772 15882825 78347578 78347577 78347630 53 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTG ..x........:...............:x..x.x..xx.......:...x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 71134301 NA +3491 chr4 + 190214555 87022544 87022543 87022629 86 ATATATATATATATATATATATATATATATATATATATATCT--ATCTATATCTATCTGTGTGTATATATATCTGTGTGTGTATATAT chr4 - 94230402 64944124 64944123 64944211 29286192 29286191 29286279 88 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATAT .:...x...::....x...x...:.x....:.......x.x.--:x:.:.....x.:.:.x.......::x....:....:.:..... 42M2I44M 61/86 70.9% 88/94230402 0.0% 2/86 2.3% 22078420 NA +3444 chr4 + 190214555 87022546 87022545 87022632 87 ATATATATATATATATATATATATATATATATATATATCTATCTATATCTATCTGTGTGTATATATAT--CTGTGTGTGTATATATATG chr4 - 94230402 64944124 64944123 64944212 29286191 29286190 29286279 89 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG .:...x...::....x...x...:.x....:.........:.xx:xx.x.....x.x.:.x.:.....--..x..:......:...... 68M2I19M 63/87 72.4% 89/94230402 0.0% 2/87 2.3% 22078422 NA +3134 chr4 + 190214555 87027762 87027761 87027805 44 TTTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 44858319 44858318 44858362 49372041 49372040 49372084 44 TTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTT ............:........x...x......x...x....... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 42169443 NA +3033 chr4 + 190214555 87027763 87027762 87027808 46 TTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 66872143 66872142 66872188 27358215 27358214 27358260 46 TTTTTCTGTTGTTGCTGTTGGGTTTTTTGTTTGTTTCTCTCTTTCT ....x:......................x...x...:.:.:...:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 20155620 NA +3385 chr4 + 190214555 87027763 87027762 87027802 40 TTTTGTTGTTGTTGCTGTTGGGTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801532 67801531 67801571 26428832 26428831 26428871 40 TTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT .................:...x.................. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 19226231 NA +20168 chr4 + 190214555 87046138 87046137 87047601 1464 TTTCATTCTTTTGTGGCATCTGAAACAGTTTGTACAATGACGACAGAAACCTGCTTCGAATTAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTTCCTGAAAAGATTCCCCTTTTTGGAGAGCCCTACAAGGTATTTACTGAACACTAGACATTGAAGTCCTGATTTATCACAATGTTGAACCCTATGATGAAACAATTCAGTATAATTGAGTTCGAACAAGGGTCA-----CAGCTGTGAAAATAAGATAACTTATTCTAACTTATTCTAGAGATTTTTGAAAACAAAGTATGAAAATTCTCTGAAGGTTGTTAGAATTACCA-AAGTTTGTGGTTTTCTTTTGTAATGCTAGTCTTCTACAGTTAGTAATATGTAT-CCATGGTAGTCTTCTCAACAGGGGAATTGAGTTAAAATGGCACATTAAATTCTACATGTCGTACATTAAGTTCGGAGTT---TTTTCCTTAATAGTATTATATAACGTGGTT---------TGTTAAATGGTAGTTTTCCTTA------------------GTTTTTTTTCATTCT------------CAAATTCTCCTTTTTTTTCAGACAGCAAAAGGTGATGAGCTGTCTAGTCGAATACAGAACATGTTGGGAAACTACGAAGAAGTGAAGGAGTTCCTTAGTACTAAGTCTCACACTCATCGCCTGGATGCTTCTGAAAA---------TAGGTT------GGGAAAGCCGAAATATCCTTTAATTCCTGACAAAGGGAGCAGCATTCCATCCAGCTCCTTCCACACTAGTGTCCACCACCAGTCCAT--------------TCACACTCCTGCGTCTGGACCACTTTCTGTTGGCAACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGATCGC---CTTGGTCAGGAGGGGT-------TCGGCTCTAGTCATCACAAGAAAGGTGACCGAAGAGCTGACGGAGACCACTGTGCTTCGGTGACAGATTCGGCTCCAGAGAGGGAGCTTTCTCCCTTAAT---CTCTTTGCCTTCCCCAGTTCCCCCTTTGTCACCTATACATTCCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCA-GCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATG-----ATAAA----GAGACCCCTCAA--GACAGTTTGGTGGCCCCTGCCCAGCCGCCTTCTCAGACATTTCCACCTCCCTCCCTCCCCTCAAAAAGTGTTGCAATGCAGCAGAAGCCCACGGCTTATGTCCGGCCCATGGATGGTCAAGATCAGGCCCCTAGTGAATCCCCTGAACTGAAACCACTGCCGGAGGACTATCGACAGCAGACCTT-TGAAAAAA---CAGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTCTCAGTCAGTTGAGGTGTGTG chr4 - 94230402 47000665 47000664 47002135 47228268 47228267 47229738 1471 TTTCATTCTCTCTT----TCCTAAA--GCTTGTACAATGAGGACAGAAACTTGCTGCGTCTTCAGGAGAGACAGAGGCGGAATCAGGAGGCTCTGCAGGAGAAAGACAAGTTCCTTGAGAACACCCCACTCTTTCCTGAGCCGTACAAGGTAGTGGTGGGGGGCT--GCATGGTGGTCC-----CATC----TGCTTAGC----TGGGGATAATAGTGCGTGCACTTAAAATTCCACAGGTGGTAACGTGCAGC-GTGGACTTTGGGTTG-----GGCAGGTTCTTTTGGGGGTCTCC-----TGAAGTCTGGGAGTT--------GGTGGGAGAGTTCTCACAAGTGGCTGGGCTACACATCTGTTTGTAG----CTGTGGTTGAAAACAGGTGCGCCTTCAGCGTCTGCTCCAGGGAGTAAT--ACTGATAAGAGCAGACTAA--TCTGCTTTGCGGAGACTGCCTGCAGAAACAAGTTGACCTTGATAGCTTAACTTGTGGTGATTAAAATAAGATCTCAGAGGGTGCCTCTTCTTGAGCTGGATCTATGGGATTGTTTTTTTCTGTTCTTTTCTGATTTCCCACTCTGTTCTTCTGTTTCAGACTAATAAAGAGGATGAGTTGTCAAGCCGTATTCAGAATATGCTGGGCAATTACGACGACTTGCAGGATCTTATTAATGACAGATGCCATCAGAATCTCATAGGGATACCAGAGAGCGACGTTCCTCAGTTCCCACAAAGAAAGCCCGACCGCCCATCCTTCCCTGAAAAGACCAGCCGTACGTTATCGTCTTCATTCCACCATGCAACCCGCTATCCACACATGGGACCCCCGGTCATTGCTCCTCCCCGTCCAGGCCACT-----------ACGCTCCCCA----CCAAAA--GGCACAACCAGGAACAGGACCAGCTCCAGGCTGGCATGCCAAGAGTCACAGCTCGTCCAGCAGCTGGAGCCAAGGTCAGGAACACAAGCGTGG-CAGGCCGGACAGTCATGCCGGTTC---TCACCACAACAGAACTGACAGGCATCCTGCTGGTGGAGGTCGTGCTCCTGAACC---TCAGGCCACTCTTTTGGAGCTTTCCCCGTTGCTGCCGTCTTTGTCTTCTCCAGTGGCACCCCTGTCACCTCTACATTCCATCCAGCACACTAATTCCAAGTCACAGAAGAGCAGCAAAGGTCATGG--GCCG--------------------GCCTACACTCAATCACCTCAGGACCGAGCGGTG--GGTTCACGGGAGAATAAAAGTCAGGACAACTCAGCCGTTATCTTGGCTGGCACCACTCAGCCTTCCTCTCAACCCTTTCCTCCACCTT---TGCCATCAAAAACCAGTGCAATGCAGCAGAAACCAACTGCCTACGTCAGACCAATGGATGGCCAAGAGCAGGCTCCGGTGGAGTCACCGGATCTCAAGCCTCTACTGGAGGAATACC-ACGGTGAACCGTATGAAAACATCTCAGATTTGAAGGCAAACACCAAGGCCAAATTATCCAAATTGAACATCTCTTCCGAGCCCACTGAGGTGAGTG .........:.:x.----..:x...--.:...........x.........:....x..xx..x::....::x.:..:..x..:.....:..:.xx..:........x:x:..:.:...:..x.::..x..:...xxx.....x.........x.x::x.::x:..--:...x.x:....-----:...----..:.x.:.----..:x..x.xx.x.xx..::.x..:.:x.:xx...:.x.x:.-----....-...:.xx.x:.:.x:-----xx:.:x..x..:.:.:.:.:.::-----::....x..::.:..--------.x..xx...:..x:..-....xxx...x:.x.x:x.x.:x.xx...----..:::...::x..:.x..::-..x.x:xx....x...x.x:.:.x...--.x.x.x..x:...x.:...--...:.x.xx..x.x.:.:xx.x.:..:x:---..xx....:....:x.x.:x.:xx...:..---------.x.:.:.x...:x:.:.:...:------------------........:::....------------..xx:.x.:...:.x........x:xx....:x......:....x..:..x..x.....:...:....x..:.....x..xx..x....x:.:x...:.:x:.::.x:..:xxxx...x.x.:.:x::x:.x..:.:---------.x:...------::.......x:.x:::..x.:xx.:.....x..::xx...x.:.:x::...xxx:..x......xx.:xx::..:.:.:.x::x...--------------.::.x.::.:x....::.:.....-----------..::.xx...----.....:--...:..:...:....x.:....::x...:.::xx........:..:::.:..:.::.x::....::.x:..x::x:.....x.:.---.x...-....xx..::-------:...:..---...:.....x.:.:x....x.:x:xx...x:..x.:xx:::.....:.x.x:x.---.:x...:x.xxxxxx.........:..x..:x.---x......:....:.....xx.x..::........x.........x......x...xx.:..x:.x.:..::::........:.x......--..x.--------------------...:.-:.:x....x..:x......x...:...--:..:..:.-----.....----::...xx....:--.x:.x:....:x.x.x.::.:.....x:.:.....:x.x.....x..x..:.---.x..x.......x::x...............:..x..x..:..:...x.:..x........:.....x.....:..x:xx..:..x..x..x..x..:..x..:.:......x..:.-..:.:::...x.-......x.---....:.....:.::xx::....:.....::.xx.....:....x..x:....:x..:.x::.......x... 14M4D7M2D138M2D12M5D4M4D8M4D41M5I4M1D15M5D23M5D15M8D16M1I29M4D20M1I27M2D19M2D29M3I30M9I22M18I15M12I137M9I6M6I87M14I24M11D10M4D6M2D85M3I5M1D10M7I7M3D54M3D33M3I90M2D4M20D5M1I27M2D8M5I5M4I12M2I52M3D117M1D12M1I8M3I72M 849/1364 62.2% 1471/94230402 0.0% 207/1364 15.2% 40045473 NA +3465 chr4 + 190214555 87046163 87046162 87046289 127 CAGTTTGTACAATGACGACAGAAACCTGCTTCGAATTAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTTCCTGAAAAGATTCCCCTTTTTGGAGAGCCCTACAAGGTA chr4 - 94230402 75628254 75628253 75628380 18602023 18602022 18602149 127 CAGTCACTATGAGCAAGACCGGAATGCACTTAAGCGAAAGGAATGGGAGAGAAGAAACCAAGAAGTCCAGCAAGATGAAGACCTCTTTGCTTCAGGTTTTAATCTCTTTGGGGAACCCTACAAGGTA ....:xx..::.xx.x...x.:..:x::...x::xxx.::..:x:...:...x.x.....:....:...x.....x:....xx:x...x..xx.::xx..xx:..:.....:..:............ 127M 77/127 60.6% 127/94230402 0.0% 0/127 0.0% 11417909 NA +5554 chr4 + 190214555 87046661 87046660 87047614 954 TTTTTTTCATTCTCAAATTCTCCTTTTTTTTCAGACAGCAAAAGGTGATGAGCTGTCTAGTCGAATACAGAACATGTTGGGAAACTACGAAGAAGTGAAGGAGTTCCTTAGTACTAAGTC---TCACACTCATCGCCTGGATGCTTCTGAAAAT----------AGG------TTGGGAAAGCCGAAATATCCTTTAATTCCTGACAAAGGGAGCAGC---ATTCCATCCAGCTCCTTCCACACTAGTGTCCAC-------CACCAGTCCATTCACACTCCTGCGTCTGGACCACTTTCTGTTGGCAACATTAGCCACAATCCAAAGATG-GCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGA-TCGCCTTGGTCAGGAGGGGTTCGGCTCTAGTCAT-------CACAAGAAAGGTGACCGAAGAGCTGACGGAGACCACTGTGCTTCGGTGACAGATTCGGCTCCAGA--------------GAGGGAGCTTTCTCCCTTAATCTCTTTGCCTTCCCCAGTTCCCCCTTTGTCACCTATACATTCCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATGATAAAGAG-----ACCCCTCAAGACAGTTTGGTGGCCCCTGCCCAGCCGCCTTCTCAGACATTTCCACCTCCCTCC----CTCCCCTCAAAAAGTGTTGCAATGCAGCAGAAGCCCACGGCTTATGTCCGGCCCATGGATGGTCAAGATCAGGCCCCTAGTGAATCCCCTGAACTGAAACC----------ACTGCCGGAGGACTATCGACAGCAGACCTTTGAAA---------AAACAGACTTGAAAGTGCCTG---CCAAAGCCAAGCTCACCAAACTGAAGATGCCTTC--TCAGTCAGTTGAGGTGTGTGGAATTTCTTATCT chr4 - 94230402 75634878 75634877 75635827 18594576 18594575 18595525 950 TCTTTTACCTTATTTATTTATGTTTATATTCTAGACAAATAAAGGTGATGCTCTTGCAAACCGTGTCCAGAACACATTGGGAAACTATGATGAGATGAAGGATCTGCTAACTAACCATTCCAATCAGAGCCATCTTGTAGGAATCCCAAAGAATTCTGTCCCACAGACACCCATCGAGAAAAATGAACAGAACTTTTTCTCAGAACAAAGAAA-CAGGGTGATCCCATCTCAT------CAGATCAGTGGCCACTCATCGACATCAATGCCTCCACCTTCGTCACTGTCATCTAATTCTGCTTTGCTGCAC-AGTCAC----CAGAGCAGCAGGAAGTCGAGAACAGACTGGTCACGCAGTGGTCA---CAACTGTAGTGGGACCCAGCAAAGCCA-------ATCCAGTAGTCAGCAAAGTCGGACAAAGCATAGCTCTTCTCATGACCTGCCACAAGGCAGAT-------------ATGAAGACCTCTATAATT----GTCAGAGTGAGCAGCATAAAGGTGGAGGAACTGAGGAAGC----------AAATTCTATGGC------------------AGCATCTTCACATTCAAGGCGGCATACTCATTCC-------AAGTCAGCAGC--------TGGAGAACATACTTACAAAGAAAACAGTCATTCA---AAGTCACCCACGGAGCTTGAGTTTGTAGGTCATGGTCCTGGATCTCCACTTCCTTCCACATCTTTGTTGTCTTCAAACAATGGTCTTTCAAGCCAG---AATTTCCCACCAGGACTTCACTGTAAAAGCAGCATGGTCCAGCAAAAGCCTACAGCATATGTTAGGCCGATGGATGGTCAGGACCAGGTACCGAATGACTCACCTGAACTGAAACCTCCCATAGAAATTGAGAGTGGA-TATGGAAATCAGTCCTTTGGAACACTGTTGGAAGGAAAAGTGAACACACCTAGTTCAAAAAATAAAGTACCAAAGCTTAATATTCCTCCTGTTGGTGAAGTAAGTCATTTAAAATATCTTTCCT .:....x.x..x.:x.x..x.x:..x.x..::.....:xx..........xx..xx.x.::..x:.x.......::...........:..x..::.......x:.x..x.x..x:x.x..---...x.x:....x:x.:.:x::::.x:.:...----------..:------.:.:....:x:...xx:xx....xx:..xx:......::.-...x---..:.....:x::------..x.::....x....-------..:..:.x.x.:...x:..x.xxx.x.x:x.:.x..::xx..x..x:..:-..:...----..:..xx.-:x.x..:.:.....x..x:x:x::.xx...xx:..---...xx.:x.:..xx.x.x.x.x.....-------.:....x.-..:x.xx:...:.:x:::.:x::.....xx....-------......:x..:.-------------.:.:.....x..:.:x..----.x....x.x:..xx..x.--------------....:...----------..x:...x..x.------------------:x..:..x:......x.:x.:...x....x.:..-------...xx......--------...x::xx::.x.x...:x:..::.x:.::::..---..:..x....x...x..x.x:x.x:x..x:....:.xxx.::-----..::.::xxx...x:..x..x.:.::::xx..::x.:...::x..x..x---x.::....x..----..:.x..xx.....::x:::::.x.....:.....:..:..x.....:x....x...........:..:....:x..x.:...x..x..............----------.:..xx:.x...-...x..x.x...x......:..---------..:x.:.xx....x:::...:---.x...:x:..:x.xx.x..:..x..x..x...:.--.::..x.:x.:..x::.x.::...x....x:.. 120M3I31M10I3M6I40M1D4M3I12M6D15M7I50M1D6M4D8M1I35M3D27M7D8M1I34M7I12M13D18M4D18M14I8M10D12M18D34M7D11M8D34M3D42M5I49M3D11M4I101M10I12M1D22M9I21M3I34M2I33M 519/865 60.0% 950/94230402 0.0% 174/865 20.1% 11411783 NA +3037 chr4 + 190214555 87048974 87048973 87049147 174 TCCTCAAAACAGTCACTCCCCCTGCCTTCTAATTCAGGCAATA-AAGAACTCAATGAGAGTTTCTTTCTTTCTTTATCAAATAGGGTTAGCTGTATGTTCCCAGTTTAAAAAAAAAAAAAAAAGGGGGGGGGGGGACAACTTAACATTCTTTCTAAAAATAACAAACCTAAAAAA chr4 - 94230402 56712761 56712760 56712907 37517496 37517495 37517642 147 TTCTGAAAACAGTTACACTCCTTAC-------TTGACACAACACAAAGACCCAATTAA-------TTCTGGCTTCA-------GGGACATTTGG-------CAGTCTTACAAAAAAAAAAAAAGGGGGGGGGGGGGGGGCTGGAAAATTGCATTTAAAAAAAAGTGCTTAAAAAA .:..x........:..x.:..:.:.-------..x.x:...:.-..::..:....x.:-------....xx...:.-------...x:.x:..x-------....:.x.x.........................:x::..x:.x.x.:x:x:.x....x..x:x:.:....... 25M7D11M1I14M7D11M7D11M7D74M 99/146 67.8% 147/94230402 0.0% 29/146 19.9% 30336213 NA +3615 chr4 + 190214555 87051536 87051535 87051618 83 CTGCAACCTCCACCTCCCGGGTTCAAGCGATCCTCCTGCCTCAGCCTTCCATGTAGTTGGAACTACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.:.........:.x.:.x.xx.x.........:..x....:..........--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 68854410 NA +3027 chr4 + 190214555 87060826 87060825 87060896 71 ACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAACGGAA chr4 - 94230402 68107287 68107286 68107357 26123046 26123045 26123116 71 ATTTTCTCTCTTAAAAAAAAAAAAATCCTCTCAAAAAAAAAACAAAAAAAAACAACAAAACACACACAGAA .:.:.x....xx.............xxxxxxx............x.............x.x.x.x..:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 18953539 NA +3081 chr4 + 190214555 87060838 87060837 87060888 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAA chr4 - 94230402 49935621 49935620 49935671 44294732 44294731 44294782 51 AAAAAGAAAAAAAAAAAAAACAAACAACCCCACAAAACAGTAACAACAAAA .....:..............x...x..xxx.......x.::.......... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 37125217 NA +3081 chr4 + 190214555 87060841 87060840 87060891 51 AAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAA chr4 - 94230402 49935621 49935620 49935671 44294732 44294731 44294782 51 AAAAAGAAAAAAAAAAAAAACAAACAACCCCACAAAACAGTAACAACAAAA .....:..............x...x...x.x.x......::.....x.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 37125220 NA +3089 chr4 + 190214555 87060841 87060840 87060894 54 AAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAACGG chr4 - 94230402 55605331 55605330 55605384 38625019 38625018 38625072 54 AAGAGAGAAGAGGAAAACAAAACAAAACAAAAAACACCAACAACAAAAAAACAG ..:.:.:..:.::....x....x......x....x.x...............:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 31455510 NA +3011 chr4 + 190214555 87060843 87060842 87060892 50 AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAACAACAACAAAAAAAC chr4 - 94230402 8842223 8842222 8842272 85388131 85388130 85388180 50 AAAAAACAAAAAACATAAAAAAAAACCTCAAAAAACATCAAAAAAAAAAC ......x......x.x..........x:x........x...x........ 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 78218620 NA +19326 chr4 + 190214555 87068579 87068578 87068938 360 TGTATGTTTTTGAACTACGCACATGGTGCTTTGCACGAATCAAAACTGCCAAAGGGACAGATGTTGCCAATTTCAAATGTACAGGGGGAAGGCAAATATTGCTAAGCAACGGTGTACTTGAGAGAGCATTTTTAGGAGCAGAGCCAGGGGAGTTATGCCTGGGAGCACTCACTGCTTCTTATGGCTCAGTACAAGGGAAGAGATTCAAAGTTCTTTCCTGTAAGGGCCGCCATTGCAGCCGCCAGCACACGAGACA--GTGACCTAGTGGCACCGATTAGGGCTGGCAAGGGGATGTGTGAAAACAGGAAAGCTTTTTTGCCATGTGGGAAGGCAGTAAGACATGTTCACAGAGGTGAGTGC chr4 - 94230402 47006241 47006240 47006591 47223812 47223811 47224162 351 TGTGGATTTCAAAACTCTCCGCACCGTTTCTTGCACTGGTGCAAAGTACCAAAGGGACCGAAGTTGCCGGTTTGAACCGTACAGGGGGAAGGCAAACATTGCTAAGCAACCGTGTGCTTGAGAGAGCGTTTTTCGGAGAGGAGCCAAGGGAGCTGTACCTGGGAGCA-TCACCGC-GCTCACGGCTCGGCACGAGGGAAGAGATTAAAAGTTCTTTCCTGGCAGGGCC---------ACCGCCAGCACAAAAGACACCGTAACCTCCTGACACCGATCAGGGCTGCTGGGGGGATGTGTGAAAACAAGAAATCTCCTTTGCCATGTAGGAAGGCGGTGAGCGATGCTGACGGAGGTAAGTGC ...:x:...:x:....x:x.:..:x..x::......x::.xx...x.:..........x..x......::...x..x:..................:.............x....:...........:.....x....x:......:.....:.:.:..........-....:..-x..:.:.....:.:..:............x..............xx......---------:...........x:.....--..:....xx..:.......:.......x:::.................:....x..::..........:.......:..:..xx...:.x..:.....:..... 167M1D7M1D52M9D19M2I104M 274/349 78.5% 351/94230402 0.0% 13/349 3.7% 40062338 NA +3117 chr4 + 190214555 87069478 87069477 87069581 104 CCTTGCTTTCTCTTTCCTCTCTCCATCTTTTCTCTCCTCTCCCCTCCTCTTTCTCTCC---------------CCTCCTCTTTCT--------------CTCCCCTTTCCCTCTCCTCTCTCTCCTCTCTCCC chr4 - 94230402 92174817 92174816 92174949 2055454 2055453 2055586 133 CCTTTTGTGCGCTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC ....x:x.x.x...x...::.xx.x:.:.::..:.::.......:....:........---------------.......:.:..--------------..:.x.x.:...x..x.....:....:...:::. 58M15I12M14I34M 71/104 68.3% 133/94230402 0.0% 29/104 27.9% -5105339 -89125063 +3086 chr4 + 190214555 87073255 87073254 87073327 73 ATTGCTCATTACCCA--------GCATTAAAGCCAAAAAAAAAA--------AAAAAAAAAAAAAAAAAAAAAAAAGCGGGGGCGGAGG chr4 - 94230402 58845058 58845057 58845146 35385257 35385256 35385345 89 ATTGCTTACAACTCACCAAAAAAGCATTTAAGCATTAAAAAAAAGAGAGCTGAAATGGAAAAAAAAAAAAAAAAAGGGGGGGGGGGAGG ......:.:x..:..--------.....x....xxx........--------...x::.................:.x.....x..... 15M8I21M8I37M 59/73 80.8% 89/94230402 0.0% 16/73 21.9% 28228197 NA +7122 chr4 + 190214555 87089958 87089957 87090077 120 TCTTCCCTTTCCAAATATCTTTCCAGGAAATGACCCATTCATGGCCGCCTCCTTTGACAGCAATACATACGCCTAGTACAGCTGAGCCATCCAAGTTTCCTTTCCCTACAAAGGTAATTC chr4 - 94230402 47012375 47012374 47012494 47217909 47217908 47218028 120 TTTTGCTTTTCTCCATCTTTTTCCAGGAAATGACACACTCATGGCCACCTCTCTTGACAGCTATTCACACGCCAAGTGCTGCAGAGCCCTCCAAGTTTCCCTTTCCAACAAAGGTAAATC .:..x.:....:xx..x.:...............x..:........:....::........x..x..:.....x...:.x..x.....x...........:..:..x..........x.. 120M 95/120 79.2% 120/94230402 0.0% 0/120 0.0% 40077583 NA +4435 chr4 + 190214555 87089977 87089976 87090073 97 TTTCCAGGAAATGACCCATTCATGGCCGCCTCCTTTGACAGCAATACATACGCCTAGTACAGCTGAGCCATCCAAGTTTCCTTTCCCTACAAAGGTA chr4 - 94230402 75750459 75750458 75750555 18479848 18479847 18479944 97 TCTCTAGGAGATGTCCCATTCCTGGCCTCCTCCTCTCACTGCTATTCACACTCCTGGAAAGGCTGAACAGACCAAGTTTTCTATCCCAAGCAAAGTA .:..:....:...x.......x.....x......:.x..x..x..x..:..x...:.x.x:.....:.x:x........:..x....x.xx..:... 97M 70/97 72.2% 97/94230402 0.0% 0/97 0.0% 11339518 NA +11482 chr4 + 190214555 87108125 87108124 87108317 193 TGCCTTCTAATTTTATCTTTTGGTTGCTTTGCAGTGCTCCACAGTCCCTTCCAGAACCAGTGGCATCAGCACATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTTCCTCAGAC---TCAGAGAGCGAGAGCAGTTCAAGTGACAGCGAAGAAAATGAGCCCCTAGAAACCCCAGCTCCGGAGGT chr4 - 94230402 47018600 47018599 47018795 47211608 47211607 47211803 196 TGCTTTCTAATTTTGTCTCCTGGTGGCCTTGCAGTGCCCTGCAGTCCCAGCCTGAGAGCGTGGCATCAGCACATTCCAACAGCACAGAGTCAGGGAGCAGCAGTGACTCAGACAGCTCTTCAGACTCTTCAGAGACAGAGAGCAGCTCGAGTGACAGTGAAGCCAACGACCCTCCAAGAGCGTCAGCTCCTGAGGT ...:..........:...::....x..:.........:.::.......xx..x..:xxx...................:...::.........::....x...............:..:......---.......xx........:..:........:....xx..:..x..:.:.::.:.x:.......x..... 125M3I68M 152/193 78.8% 196/94230402 0.0% 3/193 1.6% 40089525 NA +24412 chr4 + 190214555 87114344 87114343 87115304 961 TTTCTTTCTTTCCTTATTTTTAGCCTGAGCCTCCAACAACAAACAAATGGCAGCTGGACAACTGGCTGACCAAAGTCAGCCAGCCAGCTGCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGG------CAGCAGCGACAGTGCCACGAGTCAGGAGCATTCTGAATCCAAAGATCCTCCCCCTAAAAGCTCCAGCAAAGCCCCCCGGGCCCCACCCGAAGCCCCCCACCCCGGAAAGAGGAGCTGTCAGAAGTCTCCGGCACA-GC--AGGAGCCCCCACAAAGGCAAACCGTTGGAACCAAACAACCCAAAAAACCTGTCAAGGCCTCTGCCCGGGCAGGTTCACGGACCAGCCTGCAGGGGGAAAGGGAGCCAGGGCTTCTTCCCTATGGCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGGACGGCCCCGGGCCG-----CAGCAAGCAACGAACCCAAGCCAGCAGTGCCCCCCTCCAGTGAGAAGAAGAAGCACAAGAGCTCCCTCCCTGCCCCCTCTAAGGCTCTCTCAGGCCCAGAACCCGCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGCTCTTGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGACACCAAGCTGCTCTCACCGCTCAGGGACACTCCTCCCCCACAAAGCTTGATGGTGAAGATCACCCTAGACCTGCTCTCTCGGATACCCCAGCCTCCCGGGAAGGGGAGCCGCCAGAGGAAAGCAGAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAGCTCTGAGAAGAGGAGCTCAGACAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGTGAG chr4 - 94230402 47021196 47021195 47022135 47208268 47208267 47209207 940 TTCCTTTCTGTTTCTATCTGCAGCCCGACCCACCAACTTCCAATAAGTGGCAGCTTGACAACTGGCTCACCAAGGTGAACCCACCAGCAGTGCCAACAGAAAGCCCCAGCGACACTGCCCACACAGATGGCCACGAGGAGGACAAGGAACAACCCGTCAGCAACGCTTCCTCCTGC---GAGCATGCTGTGCCAAGGGAACCTCACGAGAGAAGCTCCATCCGAGCAGCCCAGGCTCCTCAGGATGTTCATCTTCCGACCAAACTTAGCTGCCAGAAGTCTCCTGTGCGCGCTGAGGAGCCCTCACAGAGGCAGACTGTGGGGATCAAAAGGCCCAGCAAGCCT-------CCAGTGCACGAGGAACCCAAGGGA--GGCCTGAAGGTGGAGAGCGAGCCCG------CTCCTTATGAGATTGGAGAGCAGTCTTCCAGAGACAAGCCAAAACCCAAAACAAAAAGCAGATCCAAATCCTGTGACCAAAAAGAACTGAAACCCCGGCTGCAGGAGGCTCCT-----AAAGAGAAGAAGCACAAGAGCTCCCACCACGCCGATGCCAATGCCCTGCCGGACCACAGACCCGTGAGTGATGTTCTGGTAGGCAGTGCCCAGGAGCCTTCCACTCTCAAACACCTCCCTGAGGGCCAGGGCACAGCTCCCAC------------CAGGACTAACGGCCACAGGTCTGCTGCTGAGGTCAAGGAGGGTTTTCACAAGGGGAAGCTTCCTGTGCCCACCAAGGAGAAGAAGTTGCTGCCACCGGTGAGGGACGTGCCTGGCAATCCCAGCCTCCTGGTTAGAATTGATCTCCCACTCCTGTCAAGAGTTCCCCAGCCTCCTGAGAAGGGGAACCAAAAGAAGAGAGCAGAGGTGAAGGAGCACCCTGGCACCAAGGAGCAGGACTTGGAGAAGAAAAGCACAGACACTCCTGACAGGTCCTTCAAAAAGCGAAAGGTGAG ..:......x.:::...:.x:....:..x..x.....xx.x..:..:........x...........x.....:..x.:..x:.....x.:....x....::.......x::...x.xx.x.x..x:xx.x...xx:...:::....:------.:x....:..:x.x..x.xx.:---......x...x::.x.::..x....x.xxx.:........x.x:...xx...:...:..x.xx..x.::.x:.x:..x:xx..:xxx.....:...........x.::.:-..--........:....:.....:..:..x..:.:....x::....:x..:...-------..xx...x..:.x.:x::x.x...--:.....x...x...:..x.....x.------:...:....:xx::x....x...x......:.........x..:x:x..:..:...:.xx.::..x::x..x-----..:x...x.x:...x..xx.x.x....x:xx.:...-----:.::.....................x..x:...xx:x.:..x..:..x:.:.:..xx::.....:..:x..::x.x...x:.:...x:...xx....x:.:::....::xx.x...xx.....:........x..x.:.x..x------------........::...::.x.x:xx..:.:x.x....x......::xx:.:...:.:x.::..:..xx....:x:x.::..x.xx...:....x:.....x.x......::x...xx.xxx.xx...:.xx....x.::..::x:..xxxx..x..x..xx.::.x...........:.:........:..:xx...:..:......:.xx..:x...xx..:.xx:xx...:....x::..:x.......::...x......x::.x::..:..:xx:.......x.......... 148M6I22M3D110M1I2M2I50M7D24M2D25M6D72M5I36M5D143M12D294M 584/926 63.1% 940/94230402 0.0% 49/926 5.3% 40093148 NA +4796 chr4 + 190214555 87114354 87114353 87114674 321 TCCTTATTTTT--------AGCCTGAGCCTCCAACAACAAACAAATGGCAGCTGGACAACTGGCTGACCAAAGTCAGCCAGC-CAGCTGCGCCACCA--------------GAGGGCCCCAG-GAGCACAGAGCCC--CCACGGCGGCACCCAGAGAGT--AAGGGCAG--------------CAGCGACAG--TGCCACGAGTCAGGAGCATTCTGAATCCAAAGATC-----CTCCCCCTAAAAGCTCCAGC------AAAGCC---CCCCGGGCCCCACCCGAAGCCCCCCACCCCGGAAAGAGGAGCTGTCAGAAGTCTCCGGCACAGCAGGAGC---CCCCACAAAGGCAAACCGTTGGAACCAAACAACCCAAAAA chr4 - 94230402 75855169 75855168 75855527 18374876 18374875 18375234 359 TCCTTGTTCTTCACACTGCAGCCTGAACCTCCCTCAACAAACAAATGGCAGCTGGATAAGTGGCTAAATAAAGTGAACCCCCACAACAAGACCATCATCAGCAATCAAAATGAGCCTCACAGTGAGACCAGCTCCCAGCCACAG-AACAGCCAGCAGGCTGAAGGGCAAAACAAAGGGAAGCTCAGCAACAGCCTGCCCCCAG-----------CTGATTCCAAAGACCAGGCGATCCTC-----AGTCCCATCCGAGAGAAAGCCAAACCACGGGTTGCCCAGAAAACTCCAGA---GGCAAAAAGCTCCAAGCAGAAGTCGCCAGCTCATAATGAGCCAACTGCACAAAGG---ACTACTGGGAAAAAGCAACCCAAAAA .....:..:..--------.......:.....xx......................:..x.....:.x:.....x.:..xx.-..:.x:x:...:..--------------...xx:.x...-...xx...xx...--....:.-::..x....x::.:--.......:--------------....:....--....x.x..-----------....x........:.-----x...:.-----..::...x.------......---..x....::x.x.xx:..:.:..xx.---x.x...:..xxx.x:x........x..:..x..xx.x....---.:x........---..:::...:.xx..:........... 11M8I63M1I14M14I11M1I13M2I6M1D14M2I8M14I9M2I9M11D15M5I6M5D9M6I6M3I26M3D41M3I11M3D26M 215/298 72.1% 359/94230402 0.0% 84/298 28.2% 11259185 NA +6456 chr4 + 190214555 87127018 87127017 87127126 109 TTTTGAAGGGTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTGCCTTCTTTGCCAAATGGTAACTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAGTAAGACTT chr4 - 94230402 47027188 47027187 47027296 47203107 47203106 47203215 109 TTTTTCAGGGATCTGCAGGGGATGTCACAAATCCTTTACCAGTGCCTTCTGTGCCAAATGGTACCTCCAAACCAAGGAGACCTCAGATCAAGTTTGAAAGGTGAGATTT ....xx....x...x.x..:...::::..........x............x............x...:......:...::.....::.x........x.:..:...:.. 109M 85/109 78.0% 109/94230402 0.0% 0/109 0.0% 40099830 NA +3013 chr4 + 190214555 87129926 87129925 87129983 58 TCCTTGTATTCCACTTACATCTTTACTATTTTCTTTCTTTCTTTTTTTCTTTTTCTTT chr4 - 94230402 70081435 70081434 70081492 24148911 24148910 24148968 58 TTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTT .::..x.x.......:...:xx.x.:.x......:...:.........:......:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 17048491 NA +4351 chr4 + 190214555 87131012 87131011 87131871 860 AAAGAATGTGGGTGAG---AAACTAAATCAAGGTTTGTCTTCAGCCTAACAATGACCATGTTCTTCTCCTGCAGACGGACAGGGTTGGAAAGGCTTTTAAGTACCTGGAAGCCGTCTTGTCCTTCATTGAGTGCGGAATTGCCACAGAGTCTGAAAGCCAGT--CATCCAAGTCAGCTTACTCTGTCTACTCAGAAACTGTAGATCTCATTAAGTAAGTG----CCGAGTCAT-----TGTGCTTTCCT-----CTTAAGTCCTTTTCTTTCCTCACCTTTATTGTTTTAATCCATTTGAACCTTAGTGTGAAGATGGCTCAATAAAGGGGAGCC---------TTAAAAAAGTTATTGGTCTAAGAACTAGT--GTTTGTCCTGAAGTTGCGTTCTAGATGAAGTGCT------------------------AGCACAGAATAACTGGGTCCAACTGC--ATCATTTTGCTA------AGTGCGCCAAG---AAGTGCCAAAGCTTT--GA----GGGAGATTGGTTTTTCCAG-------TTTAGCTTTTTT-------ATGAAGTGTCCTC----------TCCTCTCAGTTTAAGCCTTTGTTTACTTACCTACATTTCAACAGGGGACTCAGTAAGGACACAACTTCACTTGGTTTCAAGAGGTAGACAAGCCACAC-AAGAGACGTGTACTC---------ACCTAGTTTTCTCAATGGCCTGGATTGTTGCTCTAAAGCCTTGGGTTTTTAAATTTTTTTC----CTGTGATGCTCTCATCTCTTCTTCAGGAAAAGTCAATATAAAATGGAAACAAGCATAGTAAGTTGTATTTGTGTCTGCCTTTGTTTAAAACCTGATG----------TACT-TTTATATT-TTCCTATAGATTCATAATGTCATTAAAATCCTTCTCAGATGCCACAGCGCCAACACAAGAGAAAATATTTGCTGTTTTATGGTGCGTA chr4 - 94230402 47028411 47028410 47029310 47201093 47201092 47201992 900 AAGGAATTCGGGTATGTTTGAGATAAAT--AGTTTTTGCCGTAGTCTGAAAGTGAGAA-ATTCTT-TCCAACAGATGGACAAGACTGGAAAGGCCTTTCAGTACCTCGATGCTGCCCTTTCCTTTGTTGAATACGGGATGGCCCTGGAATC--GAATGCGGTAGCACCAAAACCTGCTTACAGCATCTTTGCTGACACAATAGATCTCCTCAAGTAAGTGGCTTTCGAACCATGACGGTGTGCTTGCAGGGAAGCAGAGGCTGTGTTGTTTGCTGG------------TGATACGTGTGAC-----ATCTGCAGGCGGTACAACCCAGGG-AGCCAGATACTGGGTAGAAAAG------GGAAAGGAACCACTTCATTCATATTGAAGTTGAGGGCTGTGTGA-GTGTTTTCAACAGCTGCTTTGACTTCCTCCGCATGGAGCTGATGGAAACAGCTGCCAGTAATTTTGTTATAGCAGACTTCAACATTTTTAAGTGTCATTGCTTTCTGATTTTGATAGACTGTATTTTCCCAATGCTCTTGTTGCTTTCTTTTCAAAAAGGAGATGTGCTTGCTCGGATTTTTTTGTGTGTTTTAGTTTTTTTTTTTTTACCAA------AAGGAAGAACTCCACCAATATGT---CTTACTTGGCCT---GGAATTGATATTCCATCCTCAGTGAGGAGAGCTCCTGTTGAGGACCTCAGGCCCTTTAGAACGGGGGCATCAGCTTT-----CTGGGGTTTTGGAGCAGTGTTTGAGGCAGTG--GCACACAGCAGTTCTTCT----------------------AACCAGACTTGAGAGCCCTAACCAGACTTG---------AGAGCCTGATGACTGACAAGATGCTGTTCATTTTGTTCCCTTAGATACGTAATGACACTAAAACCCTTTACGGATGTCTCGGCATCTTCACATGAACACGTCTTTGCTGTGTTATGGTGCGTA ..:....x:....:x.---:.:x.....--..x...xx.:x:..:..:.x.:...xx.-:.....-...x:....:.....:.::.........:...x.......x..x..:.:.:.x.....::....:.:...:..x...x::..:..--:..xx.:..--..:.x..::.x......xx::...x:x.x..x..x:........x.:.........----:...::...-----.......x.xx-----.xx.:.::x.x..x...x..x:------------.:..x.:.x...x-----:.x..x..::..:x...:xx....-....---------x..:.....------.xxx.:....:.x.--:..::.x:........x.xx..:x:...-...:.------------------------x...::..::x:x...:xx..:....--:.x......:..------.x.x.:x..xx---.....:..xx.....--..----.:x...:..xx......x:-------.x.x.....:..-------.x..::...x..:----------.::.x.xx....x..::...x...x:.....x.------..x:::.:....x::x.:x.:::---:.:......::.---.:::.x..:.xx...:x.-x..x..x.x.x:...---------....x:xx::..:x.x::.xx..::xx:x...:.-----..x.......x:.::xx.x..:----.x...--..x.x..x.xx......x----------------------...x..xx.x.x:..::x..x:::x:::..---------.:.:.......----------.:..-..:..x..-....:x.....x.:.....x..:.....:....:x.:....:.x.:..::.xx....x..:x.x:.x........x............ 16M3I9M2D28M1D6M1D85M2D9M2I56M4I9M5I11M5I22M12D13M5D24M1D4M9I9M6D14M2I28M1D5M24I26M2I12M6I11M3I15M2I2M4I19M7I12M7I13M10I33M6D23M3D12M3D18M1I15M9I34M5D22M4I5M2D18M22D30M9D11M10I4M1I8M1I88M 494/779 63.4% 900/94230402 0.0% 202/779 25.9% 40102601 NA +6836 chr4 + 190214555 87132238 87132237 87132412 175 CACGTGCAGTTTCACTTCTGTCTTT--GTTCATAGCATGCGTTGCCAGTCCATTTTGAACATGGCGATGTTTCGTTGTAAAAAAGACATAGCAATAAAGTATTCTCGTACTCTTAATAAACACTTCG------------------------------------------------------------------------------------------------AGAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATTGCAAGGTAA chr4 - 94230402 47029827 47029826 47030099 47200304 47200303 47200576 273 CAGGTGCTGACTCTTGACTGTCTTTCCATTCCCAGCATGCGCTGCCAGTCCCTCCTGCACATGGCAATGTTTCGTTACAAAAGAGACACTGCAATAAAGTATTCCAGGATCCTGAATGACCACTTCAAGGTAGGGCGTTTGTGTAGCCGTGCTGCCAGCTCAGGGACTACAGCTGGTTCTGGTATTGATAAAGAAAACTAACAAGAGCTCTCTTCCTTGCTGCAGAGTTCTTCCAGAGTAACACAGGCACCTTCTCCATGTGTTGCAAGGTAA ..x....x.x:..x:xx........--:...x:........:.........x.::..x.......:..........::....:.....:x..............:x.x.::..x...:.x......:------------------------------------------------------------------------------------------------............:...x:.x.................::........... 25M2I100M96I50M 138/175 78.9% 273/94230402 0.0% 98/175 56.0% 40102411 NA +9248 chr4 + 190214555 87134454 87134453 87134698 245 TCTCTTCCACCTCCCAGAAGCACAGGCACACCATCCCCTCTTTCCCCAATGCCTTCTCCTGCCAGCTCCGTAGGGTCCCAG------TCAAGTGCTGGCAGTGTGGGGAGCAGTGGGGTGGCTGCCAC--TATCAGCACCCCAGTCACCATCCAGAATATGACATCTTCCTATGTCACCATCACATCCCATGTTCTTACCGCCTTTGACCTTTGGGAACAGGCCGAGGCCCTCACGAGGAAGAATAAAGGTAA chr4 - 94230402 47031036 47031035 47031273 47199130 47199129 47199367 238 TTTCTTTCTCCTGC-AGAAGCACAGGCATGCCTTCTCCTCATTCTCCAGTGCCCTCTCCTGCCAGATCTATGAGTTCTCAGCAGGGATCAAATGGTAGCAATT--------------GTGGTTGCAACAGCATTGGCTCTTCAGTCACCATCCCAAGCATCACCTCTTCATACGTCAACATCACTTCCTATGTCCTCTATGCGTATAATATTTGGGAACATGCTGATGCACTGTCCAAGAATAATAAGGGTAA .:....:.x...x.-.............::..x..:....x...:...:....:...........x..::.::.x..:...------....:..x.:...:.x--------------....:...x..--:..::..x.::............x:.::..x..x.....x..:....x......x...:....:..:xx:..x.x.:.:x..........x..:..x..x..xx.x.:...x.....:..... 14M1D66M6I16M14D11M2I123M 167/230 72.6% 238/94230402 0.0% 23/230 10.0% 40103418 NA +9895 chr4 + 190214555 87135553 87135552 87136068 516 TTTTGTTTTGTTTTGTTTTTTTTGCAGAATTCTTTGCTCGGCTCAGCACAAATGTGTGCACCTTGGCCCTCAACAGCAGTTTGGTGGACCTGGTGCACTATACACGACAGGGTTTTCAGCAGCTACAAGAATTAACCAAA--ACACCTTAATGGAGCCCCAGGTTGATTCAATGCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCA--GGACACCAAAC-TCTAAAAAAGAAGCACCACGAGATGGCCAGGACATTTGTCCACTTAAACTCTCAACAACAGTGTGATCATT-------GGTTGGACACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTGGCCCCAGAGATGATCTTGCCCTTCCTAACTAAAGGACAGAAGTGCAATT--TAGCTTAAATGG----GTGTATGAATGGTCTAGAAACATTTCTATTTTTTTTTTAAACCAGCAGGATACAAGTTGCAAATGAAA------TGAGGAGAAACAGTTTCAACTCTGAAAGT chr4 - 94230402 47032806 47032805 47033318 47197085 47197084 47197597 513 TTTTCTCTCTCCCTAATCTTTTTGCAGAGTTTTTTGCTGAACTCAGCACAGCGGTGTGCCCTCTGGCACTGACCAGTAGCATGGCCGAAATGGTACACTACACTAGACAGGGTTTACATTGGCT--GAGACTGAACACAAGTACGCCTTAACTGGTGCTCATGGTGGCTAAGTACCTT--GAACT-CTTTTGCACTTTGGAAGCTTCAGAAACACTCTGG---CTTGCTGAATTATTGGATACAAAGCACCTGCAAGGGAAATAAATAAAGGTGA-------AGTAATCTGGTTACACTGGAAAAAA----ATGAACTTTATTTTAGGGTAGCATTTTGTTGCCTTGGAAAAGAAGAGAC--AGAGGAGGGCCTCAGCGTTGATGGCGCCTTCGTT---TAAAATGGTGAAGTGCAATGAATCGTCTGAGTGGCTCTGTGTATTGATGGTCTATAAACATTTCTATTACGAAT---AACCAGCAGGACAATAATCATACCTGAAGAAGTGCCGACAAGAAGGAAATCTGCCTCCAGAAGT ....x.:.:x:::.:x.:..........:..:......x::.........:xx......x.::....x..x.x...:..:x...:x..xx....:.....:..xx..........x..x::...--:...x.x...xx..--..:......:x.:xx.:..x.x..::.x.:.:....--.....-:........x........:...:.....x..::.---:...:.xx..:.--...:..x..:.-:..:x..::...::.xxxx:..:..:-------.x.x:..::x...x...xxx..x..----:...x.x..-------...x.x.:x:...x.::x..x.:...x.....:--:....xx....:...x.x....xx:...:.:x:.---....:x:xx..........x--.x.::.:.:...----......x:........x.............x:xxx.---...........:.xx.:.:::.xx....:------:..x:....:x.:x.:::x...:::.... 124M2D14M2I36M2D5M1D34M3D12M2I11M1I26M7D25M4D9M7I33M2D34M3D20M2I12M4I36M3D29M6I29M 319/489 65.2% 513/94230402 0.0% 51/489 10.4% 40102747 NA +3463 chr4 + 190214555 87142583 87142582 87142662 80 CTTGAGAACAATCCTTCCTTCACCCCCCCCCCCATTTTTTTTTTTTTTTTTTTTTTTGAGACAGGCTGTC--ACCCAGGCTG chr4 - 94230402 24307675 24307674 24307756 69922647 69922646 69922728 82 CTCAAGATAAATCCCCCCCCTCCCCCCCCCCCCTTTTTTTTTTTTCATTTTGTTTCCCAGTCAGGTCTTCTTACTCAAGCTG ..::...xx.....::..:::x...........x...........:x....x...::x..x....::x..--..:..:.... 70M2I10M 57/80 71.2% 82/94230402 0.0% 2/80 2.5% 62834908 NA +3305 chr4 + 190214555 87149150 87149149 87149238 89 AAAAACAACAATAACAACAACAAAAAAAACTGTCTTCAGAACTATGTGCAAGCATAGGTACATCCTATTTATTT------TATGGTTGCTTTTCT chr4 - 94230402 48161348 48161347 48161442 46068961 46068960 46069055 95 AAAACAAACAACAACAACAACAAAAAAAAAGATATCCAGAACTACATTTGTGACTTGGTATTTCCAAATGATTTTCAAAGTATGATTTTTTTTCT ....xx.....:.................xx:.x.:........::.x::x.xx.x....:x...x.x.x....------....:..x:...... 74M6I15M 64/89 71.9% 95/94230402 0.0% 6/89 6.7% 38987802 NA +3023 chr4 + 190214555 87161022 87161021 87161070 49 ATTGATTCTGCTTTTTTATCTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 21338265 21338264 21338313 72892090 72892089 72892138 49 ATTGGTTATGTGTTTTTATCTCTTTTTTTTTTTTTTTCCTGGGGCGGGG ....:..x..:x.........:...............::..:.::..:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 65822757 NA +15801 chr4 + 190214555 87163511 87163510 87164090 580 AACTCAAATCACATACAGTCAACCACATTATTGGATCCATGACCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCTACTCCTGCTCCAGCTCTGCAGTGAGACACAGATCCAACAAGCTCCCACCTGAAAA----GACGGAGAAGAAAAAATGTTA-------------CAAAGCA---TAATTTACTTTACTCAAAA---------------------------TACTAACCAAAGACAAAAATTCCCTAT-----------------------------------GTGAGACTGGTTTTGTAGGACAGCAAG--------CTTCCAGTG---GGAGATAAGA------------------------------------------------TATCCCAAAGCTTAGTATTAACTACGACTAGCAACATTTTAACA-CTCTGAAGTAA-------TCTACTATTATAC-------------------------CAGAAGATAATATAA----------AGCACGGAGACAACATGTAAATTACCTATTCAGCACTGGATCAAACGCTTCTACTGTATTTAAGTATGCATTGCCATTATGACCACCAACTGCAAAGATTTTGCCCATCACTGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTGCTGCCACATAATCCCACTTGTTGCTTCGGGGGTCATACCGCTCAACTGAACTCAGAGGAGAATTATCATCAAAACCACCTATGTAAAGA chr4 - 94230402 47039250 47039249 47040008 47190395 47190394 47191153 759 AGCTGAGTTCACATGCAGTCAACTACATTGCTGGATCCTTGGCCCACATCACGGATCTGGCTGCTGAGGCAGGCGCACACAGCAACGCCTGCCCCAGCTCTGCAGTGCGACACAGAGCCAACGAGTTCCCACCTGGAGAACAGGGCAAAGGAGAAGACAAGTAAGTTCGGGTCCTTTCTGAGCAACCTAAAGTATTTATTTCCAAGGTCTGAAATTCTATGATAGAACCTAGCTGTTAACTGCATAAAAATATACTTTGTTCGTTTATTCTCATTATTTCTCCAGTAAGTTTAGGGCAAAATCAGATTGGAAGCACCACAGGAACATGGATTCTCACTGAATGAAGGTAAGAGGATGAGGGACAGCCAGGAGGAGGAAGAGGGAGGAGGATGTGCTTAATTATTTCAAGA---AGAACCTAGTGACATGAGCAGCACTCCCACATCGCTTATGTGAGTATTACTCAATTACTGTACACTGCTTCTGTTATGCTGAGTTCCATACAAGCAGATATGAGTGCTTTTTTAGGCCAAATAAAAAAAAAGAACTACCTATTCACTATGGGATCAAATGCTTCCACAGTATTCAGGTACGCGTTGCCGTTGTGACCTCCAACTGCAAAAATTCTGCCCATCAGCGTTGCGATGCCAACTCCCCCCCTTGGGGTTGTAAGCTCTGCGACATACTCCCATTTGTCACTACGTGGGTCAAAGCGCTCCACGGAACTCAGTGGAGAGTTGTCATCGAAGCCACC--TGCAAAGA .:..x.:x......:........:.....::.......x..:..:.....x..:..:.....:x.x.::....x:........x..x.....:..............x........x.....:..:.........:.:.----.:.::..:....:.x.x..x.-------------.x:....---...xx..:..xx:..x..:---------------------------.::....::x.x.x...x..x.::.:.-----------------------------------.::.:.:::.x..x.x..x..x:..:.--------:.::..x..---.:..:.....------------------------------------------------...::...::---..x.::x.x.:xx.:x....:..:.::x...-.x..x.x..:.-------..x.:..:.:...-------------------------:.x...xx:....:.----------..xx.::.x.x..x.x:x:..:..........x:.:x........:.....:..x.....:.:...:..:.....:..:.....x...........:...:.........x:........x..x.....x..:..x..:..x.....:x....x.....x.....:....::..x..x......x.x.....x..x........x.....:..:.....:..:.....--..:..... 139M4I21M13I7M3I19M27I27M35I27M8I9M3I10M48I10M3D31M1I11M7I13M25I15M10I228M2D8M 407/575 70.8% 759/94230402 0.0% 189/575 32.9% 40124261 NA +3070 chr4 + 190214555 87168671 87168670 87168740 70 TGTGTATATATGTGTGTATATATATACGTATATATATGTGTATATATATACGTATATATAT---GTGTGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA ......:...:x...:....:..::..:x......xx........:.:..:....x:.:.:---:.:...... 61M3I9M 50/70 71.4% 73/94230402 0.0% 3/70 4.3% 49805631 NA +3106 chr4 + 190214555 87168763 87168762 87168838 76 TATATATATGTGTATATATATACGTATATATACACACATATATATACACACACATATATATATATCCTTCTTTTTT chr4 - 94230402 7596420 7596419 7596492 86633911 86633910 86633983 73 TGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT---TCTTTGTCTTTT .::...:.x:........:.:...:..:......x.......:x...:...:..:::x:..---..:..x.:.... 61M3D12M 51/73 69.9% 73/94230402 0.0% 3/73 4.1% 79572343 NA +3109 chr4 + 190214555 87168770 87168769 87168838 69 ATGTGTATATATATACGTATATATACACACATATATATACACACACATATATATATATCCTTCTTTTTT chr4 - 94230402 8681913 8681912 8681980 85548423 85548422 85548490 68 ATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTT ...x:...x:..:.x:.-.....x.:.:.:....:...:..........:.....xx..:..:...... 17M1D51M 50/68 73.5% 68/94230402 0.0% 1/68 1.5% 78486857 NA +18636 chr4 + 190214555 87170072 87170071 87170632 561 TACTCACCAACTACGTATAAGCAACCATGAAGCTTGCTAACTCCATTGCCTGCTCTTCGCTGACCCATTTCTTTAACTTCTATCCACTTATCCAGATGTGGATCATATCTCTCCACGCTAGATAAAGAAGCCATTCCATCATTGCCACCTACTGCATAAACATGGTTCTAAATGAAGAGAGTCAAACAAAACACATTAGATTTCGAATTTATTTATATATTGTTTTAATGGTAAATTAGAATGTACAAGGCAGTATTTCAGGAAATAATATGATATATAATATCTTCATACTGGTGATGATATATTGGACCTTTCCTTATTTTGGTTATGAATGTAATGCAATGTAATTTAATGACAAGTTGCCATATAACTTACTACTAGAGCAACAGAGCCAACTCCTCCACGGGGAGTATTCATTGGTGCCACTGTACTCCACTGATCAGATTCTATGTCATATCTCTCCACATCATTGAAGCAAGTATTGTCATCTAACCCTCCAATTGCATAAATTGGGCCTCCTAAGGAAGCCAAGGCAATTCCTCGCCTGCAAAGACAATAAAA chr4 - 94230402 47040398 47040397 47040849 47189554 47189553 47190005 452 TACTTACCAACAACATACAGGCAACCGTGGAGCTCACTGACGCCGTTGCCGGCTCTTCGCTGGCCCATCTCTTTCACTTCCATCCACTTGTCCAAATGGGGATCGTATTTCTCCACGCTGGAAAGAGACGCTATGCCGTCATTGCCACCCACAGCGTAGACGTGGTTCTGAA-----AAAGTTGCACAGGGAA-----------------------AGATTGTTTAGAAG---ACTTAGA------------------------------TGATATTTGAAA---------------------AGCAGGCCTGG----ATCCTGGCCCTGACC----TGCAAGGAAACA-------------------AACTCACCATGAGGGCTACGGAGCCGACTCCCCCCCGGGGCGTGTTCATGGGGGCTACTGCACTCCATCGATCGGACTCGATGTCGTATCTTTCCACATCACTGAAGCACGTGTTGTCATCTAGACCTCCTATTGCGTAAATGGGGCCCCCGAGGGAAGCGAGAGCAATTCCTCTCCTAAGAGAACCACAGAA ....:......x..:..:.:......:..:....::..:..x..:.....x...........:.....:.....x.....:........:....:...x.....:...:..........:..x.:...x..:..x..:...........:..x..:..:..:.......:..-----.:...::x...:::x.-----------------------.x.......x:.x.---.x.....------------------------------......x.:.x.---------------------.x::.:...xx----..::...::x...x:----.....x.x..:x-------------------....:..:.:x..:..x..:.....:.....:..x.....x..:.....x..x..:....:......::....:..:..x.....:.....:.........:.......x..:..........:x.....x.....:.....x.....:..x.:......x.::..........x...:x:.::..x.:.:.. 172M5D16M23D14M3D7M30D12M21D11M4D15M4D12M19D193M 338/452 74.8% 452/94230402 0.0% 109/452 24.1% 40129674 NA +9505 chr4 + 190214555 87176754 87176753 87176871 118 TACCTCTTTGTGTTCATTGATGCCTTCATCATCCATTTATTAGTGAGAGGATCAAACATCTCCATACTCCCTAAATGTTCATTTCCATCATGTCCACCTACTGCATACACTTTACCTG chr4 - 94230402 47042272 47042271 47042389 47188014 47188013 47188131 118 TACCTCTTTGTGTTCATTGATGCCTTAATCATCCACTTGTTTGTGAGAGGATCAAACACTTCCATGCTTCCTAAATGTTCATTTCCATCATGTCCACCCACTGCATAGACTCTACCTG ..........................x........:..:..x................::.....:..:.............................:........x...:...... 118M 107/118 90.7% 118/94230402 0.0% 0/118 0.0% 40134482 NA +10121 chr4 + 190214555 87178471 87178470 87178627 157 ACCCACCTTCCACAGAGATTACACCCACATGTCGCCTTCGACTATTCATTTCTGGTCCAAAGAACCAACTGTTTTTGTTGATAGAATAGCATTCAATACTGCGAAAGGGGTCACCAGATCCACCTCGACCACCTACACAAAACAGCACACCTAAAGG chr4 - 94230402 47043107 47043106 47043263 47187140 47187139 47187296 157 ACTGACCTCCCACAGAGATTACACCCACGTGTCTTCTCCTGCTGTTCATTTCAGGGCCGAAGAACCAGCTGTTCTTATTTATAGAGTAACACTCAATGCTGCGGAATGGGTCACCCGATCCTCCTCTGCCACCGACACAGAACAGCACACCTGGAGG ..:x....:...................:....x:..:.x:..:........x..x..:........:.....:..:..x.....:..:..:.....:.....:..x........x.....x....x:.....x.....:............::... 157M 126/157 80.3% 157/94230402 0.0% 0/157 0.0% 40135364 NA +14465 chr4 + 190214555 87183193 87183192 87183393 201 ATTTGGTTACCAGCAGTATGCTTCCTTGGGGTAGTCCGAATGGAGTATTCAAAGTCAGGTACTGCTCTGCTACTCAAGTGAAGGTGGTAATTTCTTGCTTCATCCAGTAAATCTCTACATTTTAGATTTTGCTTGACAATCTGTTCTTTTGCCACAACACCCATAAGAAAATCAACCGGCAACAATGGCAGGCGAACCTAA chr4 - 94230402 47043921 47043920 47044121 47186282 47186281 47186482 201 ATTTAATTACCAGCAGTCTGCTTCCTTGGTGTTGTGCGAATGGAGTATTCAAAGTCTGGCACTGCCCTGCTGCTCAGGTGAAGGTGGTAGTTTCTTGCTTCATCCAGCAAATCCCTACATTTTAGATTCTGCTTGACAATCTCTTCCTTTGCCACAACACCCATAAGGAAACAAATGGGCAAGAGAGGCAGTCGTACCTGA ....::...........x...........x..x..x....................x..:.....:.....:....:............:.................:.....:..............:.............x...:....................:...:x..:x.....x.:x.....x..x....:. 201M 173/201 86.1% 201/94230402 0.0% 0/201 0.0% 40139272 NA +38447 chr4 + 190214555 87185246 87185245 87185847 602 CCTACCTGTGCAAGTGTTTCATCCAACCATTTGGAATGATGCTGAGGATTGGCAAGAAGCCACTTGATGGCAGCATTATAGACCTGCTTTTCATTTTCAATATTTAGATCACTGGAGGACAAAAGCTTATGGAGGTGCTGCGGTGATACACTTACAAAGTCTTCACACTCCACTACTTCAGTAAAATGGTCACAGGCATACTGATCCGCCATGTCCATTAAGTCTATTCGATTGTGACTTTCTGCAAAGGCTCTTACTGCCAGGCAATTGGAGGGATGAAAATGTAACTTCATGTATTCACAACAAGCTCTAGCCACCAGTTCAACCTGCAGAATACAGGCTGCATATAAGAGAGGCTGGACATTGTCAACAGTCAAAGTGAGCCGTGAAGAATAGACAAACTTTACCAAGTCTTCTATTGCATCACCATCAAAATCTCTAATCTCAATCAGCGTTTGCTTGGCTTCAGCCATTTCAGAAAGAAACATGGCTCTAAAGTAGGGAATAACACAAGCCAATACCAGCTTGTGACAAGAGATTAGCTTTGAGCCAACCTGTTCAAAAGAAACCAAGAAAGATTCTGTTTAATATCAAAATCAGCT chr4 - 94230402 47046581 47046580 47047176 47183227 47183226 47183822 596 CCTACCTGTGCGAGAATTTCATCCAGCCACGTGGCGTGATGCTGTGGATTGGCTAGCAGCCACTTGATAGCAGCATTGTAAACCTGCTTTTCATTCTCAATGTTCAGGTCGCTGGAGGACAACAGTTTATGGAGGTGCTGAGGTGAGACGCTCACAAAGTCTTCACATTCCACCACCTCAGTAAAATGTTCACAAGCGTACTGATCGGCCATGTCCATCAGGTCAATGCGGTTGTGGCTCTCTGCAAACGACCTGACCGCCAGGCAGTTGGAGGGATGGAAGTGCAGCTTCATATATTCACAGCACGCCTTTGCTACCAGTTCCACCTGAAGAATGCAAGCGGCATACAGGAGTGGCTGGACATTATCCACGGTCAGTGTCAGCCGGGAGGAGTAGACAAACTTCACGAGGTCTTCTATCGCATCGCCATCAAAGTCCCTGATCTCAATCAACGTCTGCTTGGCTTCGGCCATTTCTGAAAGAAACATGGCTCGGAAGTAAGGTATAACACACGCCAGCACCAGTTTGTGGCAGGAGATGAGCTTTGTGCCAACCTGAGAAAGAGAAAACAAAA------CTATTTTACTGAAACATCAGTT ...........:..x:.........:...:x...x:........x........x..x...........:........:..:..............:.....:..:..:..:...........x..:..............x.....x..:..:..............:.....:..:...........x.....:..:........x...........:.:...x..x..:.....:..:........x.x:..x..:........:...........:..:..:.:......:........:..x..::.x..:........x.....x.....:..:..x.....:.:...x...........:..x..:....:x..x.....x..:..:...........:..x.:.........:.....:........:..:..:..........:...:...........:........x................x:.....:..x........x....::.....:.....:..:.....x.......x.........xxx..:.....x...:.------..:...x.:xxx..x.....:. 574M6D22M 485/596 81.4% 596/94230402 0.0% 6/596 1.0% 40138665 NA +9665 chr4 + 190214555 87195320 87195319 87195583 264 TCACCTTGAGTGTGACATCACAGAGTTCTCCATTTTCATAAAATCGAAGAAGAGAACCATGAAAATCTTTCCAAGCTTCATTTGCTTCAAAAATAAAGGAATCTTCTCCATCACCATCACTAATTGAGGATCTGTTCTTTATTTGCTGGTGCTGTTGTTGCCTTTTCCCCTTTGTAATGTGATTCCTAGCTTGTTTACTACTCATAGAATCTGAAGCCATTTGCAATATTCCTCTTTTAATAGAGCTCTCTTCTCAAACATGCC chr4 - 94230402 47048013 47048012 47048265 47182138 47182137 47182390 253 TCACCTTCAGCGTAACATCACAGAGCTCTCCAGCCTCAAAGAAGTGAAGAAGAGAGCTGTGGAAATCCTTCCAAGCCTCGTTTGCTTCAAATACAAAGATATCATCT---TCACCATCACCGCTGGAAGACCGA------GTTTGCTGCTGCTGCGGCCGCCTTTTTCCCTTCATTGGATGTTGTTTTGCCTGCTCTGGGACCATGGATTCTGAAGCCATTGGT--TGTTTCGTCTTTCGCAGTGTGCAACTGTCAAATGTTCC .......x..:..:...........:......x::...x.:..x:..........:.::..:.....:........:..:...........x.:....:x...x...---..........::x.x..:..:.x:------:.......x.....:x.::.......:.....::.x:x:..x.x::.x..:..:.:xxx:x:...:..x............x.:--.:..:.x::...x::..x.:x.xx:.x.....::.x.. 107M3D24M6D84M2D38M 173/253 68.4% 253/94230402 0.0% 11/253 4.3% 40147307 NA +3035 chr4 + 190214555 87199827 87199826 87199868 42 AAAACAAAACAAAACAAACAAACAAAAACCAAAAACATGCCA chr4 - 94230402 66950143 66950142 66950184 27280219 27280218 27280260 42 AAAACAAAACAAAACAAACAAACAAAAAACAAAGAAACTCCA ............................x....:.x.:x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 20249684 NA +3663 chr4 + 190214555 87214874 87214873 87214956 83 CTGCAGCCTCCTCCTCCTGGGTTCACATGATCCTCCAGCCTCCGCCTCTCAAGTAGCTGGGATTACAACTGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:xxxx..:.........x:..x.:.x.x:.x...x....:............:.:....--:.........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 69017748 NA +3175 chr4 + 190214555 87226733 87226732 87226817 85 TATTATTTATATAT-----AATATATATTATTTATATATAATATATATTATATATATAATATATATTATATATAATATATATTATATATA chr4 - 94230402 67910059 67910058 67910142 26320261 26320260 26320344 84 TATTACATATACAATACTAAAAATATACTATTAG------ATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACA .....:x....:.x-----..x.....:....x:------...:...x..x......x:......x............:..x......:. 14M5I15M6D50M 62/79 78.5% 84/94230402 0.0% 11/79 13.9% 19316674 NA +3021 chr4 + 190214555 87229417 87229416 87229461 45 TCCTTTTTTTTTTTTTTTTGGTGGGGGGGGGTGCAGGGAACAGGG chr4 - 94230402 21866348 21866347 21866392 72364011 72364010 72364055 45 TTCTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGAGGAGTAGGG .:...................x.........x.x::...::.... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 65363069 NA +3210 chr4 + 190214555 87229819 87229818 87229898 80 CTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGCCCGCCACCACCTACCCTTTTT chr4 - 94230402 18197139 18197138 18197216 76033187 76033186 76033264 78 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGTATCATCCTT ..:.::......x.:xx...x.xx.x........::..................x...--.:....:::x..:.x.::.. 58M2D20M 55/78 70.5% 78/94230402 0.0% 2/78 2.6% 69032680 NA +3170 chr4 + 190214555 87243024 87243023 87243109 86 TTTGAAGGCAGGAGTTTGAGACCAGCCTAGGCAACATAGTGAGACTATCTCTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 36313547 36313546 36313628 57916775 57916774 57916856 82 TTTGAAAG--AGAATTTCAAAT--GACTTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAAGCAATAGA ......:.--:..:...x.:.:--.x..x....:.....x:...x:......:x:x..........:...........:x..x.:. 8M2D12M2D62M 60/82 73.2% 82/94230402 0.0% 4/82 4.9% 50929477 NA +3068 chr4 + 190214555 87243038 87243037 87243118 81 TTTGAGACCAGCCTAGGCAACATAGTGAGACTATCTCTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGAGA chr4 - 94230402 14712912 14712911 14712992 79517411 79517410 79517491 81 TTAAAAATTAGCTTTCATTAAATAAAAAGGCTATATGTGATTAAAAAAAAAAAAGAAGAAAAATCATAAAAAATGGAGAGA ..x:.:.::...:.xx::x.x...:x:..:....x.x...:x............:..:.....xx.x......::...... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 72530126 NA +3013 chr4 + 190214555 87243080 87243079 87243130 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGAGAAAGAATGAAAGA chr4 - 94230402 40332895 40332894 40332945 53897458 53897457 53897508 51 AAAAAAAAAAAAAGAAAAAACACAAAAATAGCAGGAACATAAAATGAAAGA .............:......x.x.....x.:...::.x.x.:......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 46910185 NA +3472 chr4 + 190214555 87243081 87243080 87243153 73 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGAGAAAGAATGAAAGAAAGAAAGAGAAAAAGAAAGATTA chr4 - 94230402 35652685 35652684 35652757 58577646 58577645 58577718 73 AAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAAAAAAAAAGATTA .....x...x..........::........xx:x.::.:x:.......:x.x..x:.:......:........ 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 51590396 NA +3230 chr4 + 190214555 87255497 87255496 87255599 103 AATTTTAGATTCCTCTAGGCAAGGCTCAAATCTCGTCTCTTTAATAAAAATTTTCTACCTTCCTAAAGTAATCTTTCATTTTCTATGCATGTGCAGTAAATAA chr4 - 94230402 29808229 29808228 29808313 64422090 64422089 64422174 85 AATTTTGGATTCTTATATGGA------------------TTAAATGAAAATTCTGTACCTTTCTGAAGTTTATTTTCATTTTCAATACATTCACTGTAAATGA ......:.....:.x..x.x.------------------..x...:......:.x......:..:....xxx:..........x..:...x::.x......:. 21M18D64M 63/85 74.1% 85/94230402 0.0% 18/85 21.2% 57447268 NA +3126 chr4 + 190214555 87256567 87256566 87256629 63 CTGTTTTCTTTTCTTTTTTCTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 40550293 40550292 40550355 53680048 53680047 53680110 63 CTATTTTCATTACTCTTTCCGCTCCTGTTTATTTCTTTTTTTTTTTTTTTGACATTTATGAAA ..:.....x..x..:...:.x:..:.....x...:...............xx:x...x...:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 46706274 NA +3234 chr4 + 190214555 87259619 87259618 87259667 49 CTCTTTTCTTTTCTTTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCC chr4 - 94230402 20596770 20596769 20596818 73633585 73633584 73633633 49 CTCTTTTTTTTTTTTTTTTTTTCCCTTCCTTTTCCCCCTCCCCCCCCCC .......:....:...........:..:.....::..:...::..::.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 66662849 NA +3003 chr4 + 190214555 87259630 87259629 87259677 48 TCTTTTTTTTTCCTTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCTTT chr4 - 94230402 49389480 49389479 49389527 44840876 44840875 44840923 48 TTTTTTTTTTCCTTTTTTTTTTTTCCTTCCCCCCCCCCCCCCTTTTCT .:........:.:....:............::..::..::....:.:. 48M 36/48 75.0% 48/94230402 0.0% 0/48 0.0% 37870150 NA +3073 chr4 + 190214555 87259675 87259674 87259743 69 TTTCCTTCCTCCCTCCCTCCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTGACAGAG chr4 - 94230402 43496262 43496261 43496330 50734073 50734072 50734141 69 TCTGCTTTCTACCACCCTCCTTTCCCTCCTTTCTTCTTCTTCTGCTGTTGTTTCTTCTTGGTGGCAGGG .:.x...:..x..x......:....:.:.......:.::....x::x..x...:..:..xx..:...:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 43763413 NA +4374 chr4 + 190214555 87263772 87263771 87263852 81 CTGCAGCCTTGAACTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTTCCAAGTAGCTGGAACTACAAGTGTGCTACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:.....:x:.:..:.....:.....::x.:.x.xx.x.........:..................x...::.:..::.. 81M 59/81 72.8% 81/94230402 0.0% 0/81 0.0% 69066646 NA +3187 chr4 + 190214555 87267710 87267709 87267775 66 CTCTCAAAAAAAAAAAAAAGGAGAAAAGAAAAGAAAAGAAGGAAGAGGAAGAAAGGGAAAAGGAGA chr4 - 94230402 81167071 81167070 81167136 13063267 13063266 13063332 66 CTCCTAAAGAGGAGAGGAACAGGAAAAGAAAAAAAAAAAAGAAAGAGGAACAGGGAGCAGAGCAGA ...::...:.::.:.::..x::..........:....:...:........x.::.:.x.:..x... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 6100639 NA +3078 chr4 + 190214555 87271352 87271351 87271430 79 TGTTTCTCTTAAAGGTAATAATTGCCTCATTTTTCCCCGTTTGCTTATTTTTCTTTGAACTGATGGACAAAATTTCCCA chr4 - 94230402 18551524 18551523 18551602 75678801 75678800 75678879 79 TGTTTGTCTTAAAGCTGATAAGTGCTTTTTTTTTCCCCTTTTCTTTGTCCTCATTTTAGCTTGTGGTTATACTTCCTTA .....x........x.:....x...:.:x.........x...x:..:.::.:x...x.:..x:...x:.x.x..:.::. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 68719828 NA +3034 chr4 + 190214555 87277049 87277048 87277120 72 CTGCAACTTCTACCTCCCTGGTTCAAGCGAGTCTTCTGCCTCGGCCTCTCAAGTGGCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:.::xx.x..:.:x........:.xx..x:xx.x...:....:......:.....:......x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 69079923 NA +3744 chr4 + 190214555 87288162 87288161 87288222 61 CTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.::..........x...x..x.x........:.::.........:.:....x...... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 69091023 NA +3740 chr4 + 190214555 87290755 87290754 87290836 82 TGCAACCTCCGTCTCCTGGGTTCAAGTGATTCACCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCCACCATCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:..:..:xx:x..:.............x.....xx.x........::...........:.:....--.::x.....:::.. 66M2D14M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 69093628 NA +3077 chr4 + 190214555 87304309 87304308 87304379 71 AAAAAAACAAAAAACAAAACAAAACAAAACAAAAACCAAAAAACCTTT--CTTTCTTCCTTTTCTTCTCTTGG chr4 - 94230402 21291815 21291814 21291887 72938516 72938515 72938588 73 AAAAAAACAAAAAACAAAACAAAACAAAAAAACAACCGAGCATATTATCACTATATACCTTCACATTCCTTGG .............................x..x....:.:x.xx:.x.--..x.x.x....:x.x.::..... 48M2I23M 54/71 76.1% 73/94230402 0.0% 2/71 2.8% 66012494 NA +3082 chr4 + 190214555 87304312 87304311 87304369 58 AAAACAAAAAACAAAACAAAACAAAACAAAAACCAAAAAACCTTTCTTTCTTCCTTTT chr4 - 94230402 10256783 10256782 10256840 83973563 83973562 83973620 58 AAAATTCACAAAAAAACAAAACAAAACAAAAACAAAAAAACCTGTATCCTCTCCATTT ....:xx.x..x.....................x.........x.x.::::...x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 77047529 NA +4722 chr4 + 190214555 87310255 87310254 87310383 129 AGAAAGATATTGATATACGATGGAACAAAAATCATTTTCTTATTGGTAAGTATTCCATCTATCAGACTTCTTACGACTTCATCTGTCTCCAATACAGGCCATAATCTGTGATTAAAAAGAGGAAAATAT chr4 - 94230402 47059983 47059982 47060109 47170294 47170293 47170420 127 AGCAAAGCGTTGATTT--GATGGAACAAAAACCATTTTCTGGTTGGTCAGTATTCCTTCCATCAGTGCCTTCACAACTTCATCAACCTCCAAGATCTTTCCAAGCCTAAAATCAAAGGAAAGCATATAT ..x..::::.....x.--.............:........x:.....x........x..:.....xx:::.:..:........x::......x.:xxx:.xx.::..:x:..:...:::.:.x.x.... 16M2D111M 85/127 66.9% 127/94230402 0.0% 2/127 1.6% 40250272 NA +4342 chr4 + 190214555 87310270 87310269 87310346 77 TACGATGGAACAAAAATCATTTTCTTATTGGTAAGTATTCCATCTATCAGACTTCTTACGACTTCATCTGTCTCCAA chr4 - 94230402 47071092 47071091 47071168 47159235 47159234 47159311 77 TGTGGTGGAACAAAAACCATTTTCTGGTTGGTCAGTATTCCTTCCATCAGTGCCTTCACAACTTCATCAACCTCCAA .::.:...........:........x:.....x........x..:.....xx:::.:..:........x::...... 77M 58/77 75.3% 77/94230402 0.0% 0/77 0.0% 40239178 NA +7203 chr4 + 190214555 87313811 87313810 87313971 161 TTTTGACC-TTACCTTGTGCTTGGATTTTTGGTGAACCCAGTATTCACAAAAACTGGGCAGAGACATGAGGTTTTGATACCAGTTTTTCCCAAGGCCTGAAGTTCTGATGTCAGACCTCTGTGAAAGCCAACAGCGGCAAATTTGCTGGAACTGTAAGAGAA chr4 - 94230402 47060268 47060267 47060429 47169974 47169973 47170135 162 TTCTGATCGTTACCTCATACTGGGGTTTTTGACAAATCCAGTATTTATAAAAACTGGGCAGAGACATGTTGTTTTTATTCCATCCTTTCCCAGGGAAGACAGCTCATCCGTTAGAGCTTTATGGAATCCAACTGCAGCAAACTTGCTTGCGCTGGTGGAGGA ..:...:.-......::.:..x..:......:::..:........:.:....................xx.....x..x...x::.......:..xxx:x..:..xxx:..:...x..:.:..:..x.....x..:.....:.....x.x:...xx:...:. 8M1I153M 114/161 70.8% 162/94230402 0.0% 1/161 0.6% 40253543 NA +7792 chr4 + 190214555 87313811 87313810 87313971 161 TTTTGACC-TTACCTTGTGCTTGGATTTTTGGTGAACCCAGTATTCACAAAAACTGGGCAGAGACATGAGGTTTTGATACCAGTTTTTCCCAAGGCCTGAAGTTCTGATGTCAGACCTCTGTGAAAGCCAACAGCGGCAAATTTGCTGGAACTGTAAGAGAA chr4 - 94230402 47071364 47071363 47071525 47158878 47158877 47159039 162 TTCTGATCATTACCTAGTACTGGGGTTTTTGACAAATCCAGTATTCATAAAAACTGGGCAGAGACATGTTGTTTTTATTCCATCCTTTCCCAGGGAAGACAGCTCCTCCGTTAGAGCTTTATGAAATCCAACTGCAGCAAACTTGCTTGAGCTGGTGGAGGA ..:...:.-......x..:..x..:......:::..:..........:....................xx.....x..x...x::.......:..xxx:x..:..:xx:..:...x..:.:.....x.....x..:.....:.....x..:...xx:...:. 8M1I153M 118/161 73.3% 162/94230402 0.0% 1/161 0.6% 40242447 NA +4939 chr4 + 190214555 87315487 87315486 87315644 158 ACTTACCAATATGGGATGAGGTAAGGAATCCCTTCGTGGCCGCACACTGAAGCCACTGTGACGATGTGGCCATGATTTCTCTCCATCATCGATGGAAGAAGTGCTTTTGTGATCTT----------------AAGGATCA---------TTGCAGAAAGAAGAAAGA-CAATGACATAGACGTT chr4 - 94230402 47061181 47061180 47061364 47169039 47169038 47169222 184 ACTTACCAATAAGCCACCATGAAAGGAATAACAAAATGACCTGCTGCAGAAGCCACTGTGACAATGTGACCGTGGTTGTTGTTCATCATTGTTGGCAGAAAAGCTCTTGTTGTCTTGAAAAGGATTTAGAACAAGGGCCAGAAAAAGGGTTGGGGAAGGAAGAAAGAGTAATGTCTTAAGTGTT ...........x.xx.:x.x.x.......xx.xxx:..:..xxx::.x..............:.....:..:..:..x:.x.:......:.x...x....:x...:....x:....----------------....::..---------...x:...:.........-:....x.x..:::... 116M16I8M9I18M1I16M 111/158 70.3% 184/94230402 0.0% 26/158 16.5% 40254306 NA +5966 chr4 + 190214555 87317080 87317079 87317281 202 ACTCACACTCACCCAAAAATGTCCTAGGATGTTGACCTCAAATGTCTTGGTAATCTCTTCATCCTTGGTGCTGAGAAGATCGGCTGGATATACTGTCCCAGCATTATTCACCACGATTGTTACATCACCCACTTCTTTCTTCACCTTTTG---AAATTGAAAGAACACTTTCACTGGGTGTATTATTC---AAACTCAAAGTTTTGGG chr4 - 94230402 47073327 47073326 47073534 47156869 47156868 47157076 208 ACCAGCCCTTACCCAGATGTGAGCGAGAATGTTGACTTCAAACATTTTCTCAATTTGGTGGTCCTGGGTGGAGAGCAGGTCGGCAGCTGTAATCACCCCAGCGTTATTCACCAGGATGGACACATCACCAATGTCCTTTTTCACCTTTTGGACAAAAGGAATGCGCAGCCCCATGACGTTCATTATCACAGAAATGCAAGGTTGTGAG ..:x:.x..:.....:.x:..xx.x..:........:.....::.:..xx:...:.xx.x:....x....xx...x..:.....x.xxxxx.::::......:..........x...x.x:........x.:x..:..:...........---...xx...x.x:..x:::..:x:x..x:.....:x---...:x...:...x..:. 150M3I35M3I17M 131/202 64.9% 208/94230402 0.0% 6/202 3.0% 40243753 NA +5924 chr4 + 190214555 87317084 87317083 87317231 148 ACACTCACCCAAAAATGTCCTAGGATGTTGACCTCAAATGTCTTGGTAATCTCTTCATCCTTGGTGCTGAGAAGATCGGCTGGATATACTGTCCCAGCATTATTCACCACGATTGTTACATCACCCACTTCTTTCTTCACCTTTTGAA chr4 - 94230402 47062421 47062420 47062568 47167835 47167834 47167982 148 ACCCTTACCCAGATGTGAGCGAGAATGTTGACTTCAAACGTTTTCTCAACTTGGTGGTCCTGGGTGGAGAGCAGGTCGGCAGCTGCAATCACCCCAGCGTTATTCACCAGGATGGACACATCACCAATGTCCTTTTTCACCTTTTGGA ..x..:.....:.x:..xx.x..:........:.....:..:..xx:..::.xx.x:....x....xx...x..:.....x.xxxxx.::::......:..........x...x.x:........x.:x..:..:...........:. 148M 101/148 68.2% 148/94230402 0.0% 0/148 0.0% 40254663 NA +5160 chr4 + 190214555 87318312 87318311 87318451 140 TGAACCTGCAGTCTCACCTGATTTAGAGAGCGATAGATCTCTTCTCTGTTGCTGCAGTCTACCACATACGCATGCGCAGTGACGCCTAGTTTTCGGCACTCAGCTGCAGTTTCCTCCACACCGCGCTGTAATTAGGAAGA chr4 - 94230402 47063106 47063105 47063245 47167158 47167157 47167297 140 TGCACCTGCTCCCTTACCTTCTCGGCAGCGCTGTAGATCTCCTCCCTTTTGCTGCAGTCCACCACAAAGGTGTGAACGCTGGCTCCCAGCCCTTCGCATTCTGCTGCCGTCTCCTTGAGGCCATGCTGTGGGGAGAAGGA ..x......xx:..:....xx.:x:x..x..x:........:..:..x...........:......x.x.::..x:.:x..:.x..:..:::.:x...:..x.....x..:....:x.x:..::.....::xx..:.:.. 140M 90/140 64.3% 140/94230402 0.0% 0/140 0.0% 40255206 NA +4402 chr4 + 190214555 87318338 87318337 87318456 119 AGAGCGATAGATCTCTTCTCTGTTGCTGCAGTCTACCACATACGCATGCGCAGTGACGCCTAGTTTTCGGCACTCAGCTGCAGTTTCCTCCACACCGCGCTGTAATTAGGAAGAAACAA chr4 - 94230402 47073866 47073865 47073984 47156419 47156418 47156537 119 AGCACTGTAGATCTCCTCTCTTTTGCTGCAGTCCACCACAAGGGTGTGAACGGTTGCTCCCAGCCCTTCACACTCCGTTGCTGTCTCTTTGAGGCCATGCTGTGGGAGGAAGGAAAGAA ..x:.x:........:.....x...........:......x:x.::..x:.:..x:.x..:..:::.:x:.....x.:...x..:..:.:x.x:..::.....::xx:.:.:....x.. 119M 75/119 63.0% 119/94230402 0.0% 0/119 0.0% 40244472 NA +3200 chr4 + 190214555 87320321 87320320 87320401 81 GAGAGCATAAGTTACCAGAGCATTCATCAGATGTTTTGATTGAAGAATTAATTATTCTTCAGTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67641254 67641253 67641334 26589069 26589068 26589149 81 GAAAACAAGAGCTGCCATTATTTTCTACTGACATTTTGATTGAATAATGATTTATTTTCCAGTCTTTCTTTTTTCCATTCT ..:.:..x:..:.:...xx::x...xx.x..::...........x...x.x.....:.:....:...:......::x..:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 19679067 NA +4263 chr4 + 190214555 87335980 87335979 87336069 90 TGGCACCATTTCGGCTCGCTGCAACCTCAACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:...x.:------..:..:..:x..x..:.............x...x.xx.x........:............:......x.::. 12M6D72M 65/84 77.4% 84/94230402 0.0% 6/84 7.1% 69138866 NA +3339 chr4 + 190214555 87341142 87341141 87341185 44 TTTGGTTTTTTTGGTTGTTGTTGTTTTTTTTGGTTTGTTTGTTT chr4 - 94230402 17488394 17488393 17488437 76741966 76741965 76742009 44 TTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT .....:......x............x.....x............ 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 69852748 NA +3082 chr4 + 190214555 87347084 87347083 87347182 99 GTTGTTTTTAGTATTCTGGATTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTG---CAGGTTAG chr4 - 94230402 20122141 20122140 20122231 74108172 74108171 74108262 91 GTTACTTTTAGT-----------TTTTTTTTTGTTTTCTTTTTTAATTCTTCTGTAAAATCCTAAATACTTGAGTGTGTGTGCACATAGGGTGACAGGTAAG ...::.......-----------.........x....:......xx..:..:.:.x.x.::....:.x:.x.:..:::.........x.x.---.....x.. 12M11D68M3I8M 64/88 72.7% 91/94230402 0.0% 14/88 15.9% 67224943 NA +8035 chr4 + 190214555 87357275 87357274 87357419 145 TTACCTTGTACTTGGATTTTTGATGAAGCCAGTGTTTACGAAATTAGGACACAGACATGTTGTTTTGACTCCAGTTATTTGTAAGGCAGCCAGTTCATCTGTCAAAGTTTTATGAAATCCAACAGCAGCAAACTTGCTTGAACTG chr4 - 94230402 47060277 47060276 47060421 47169982 47169981 47170126 145 TTACCTCATACTGGGGTTTTTGACAAATCCAGTATTTATAAAAACTGGGCAGAGACATGTTGTTTTTATTCCATCCTTTCCCAGGGAAGACAGCTCATCCGTTAGAGCTTTATGGAATCCAACTGCAGCAAACTTGCTTGCGCTG ......::....x..:.......::..x.....:....::...x:x..:..x..............x.:....x::x..:x:.:..x..x...:.....:..:.:..:......:........x................x:... 145M 109/145 75.2% 145/94230402 0.0% 0/145 0.0% 40296998 NA +8074 chr4 + 190214555 87357275 87357274 87357419 145 TTACCTTGTACTTGGATTTTTGATGAAGCCAGTGTTTACGAAATTAGGACACAGACATGTTGTTTTGACTCCAGTTATTTGTAAGGCAGCCAGTTCATCTGTCAAAGTTTTATGAAATCCAACAGCAGCAAACTTGCTTGAACTG chr4 - 94230402 47071373 47071372 47071517 47158886 47158885 47159030 145 TTACCTAGTACTGGGGTTTTTGACAAATCCAGTATTCATAAAAACTGGGCAGAGACATGTTGTTTTTATTCCATCCTTTCCCAGGGAAGACAGCTCCTCCGTTAGAGCTTTATGAAATCCAACTGCAGCAAACTTGCTTGAGCTG ......x.....x..:.......::..x.....:..:.::...x:x..:..x..............x.:....x::x..:x:.:..x..x...:..x..:..:.:..:...............x.................:... 145M 110/145 75.9% 145/94230402 0.0% 0/145 0.0% 40285902 NA +6236 chr4 + 190214555 87372665 87372664 87372829 165 AAGGTAGGCATAAGAACCAATGAAGGAAACACATGTT-----CACATACCAGTAAGCCAGTAAGAAGGGGACCGAGACATGTCCAGCTGCCGAAGCCACAGTGACAATATGGCCATGGTTATTCTTCGTCATTGCAGGAAGAAATGCCTTTGTAGTCTACAAATAGTTTT chr4 - 94230402 47061141 47061140 47061307 47169096 47169095 47169262 167 AAGACAAAGATAAGAAACAA---AGAGAGCTGATTTTGAAGTCACTTACCAATAAGCCACCATGAAAGGAATAACAAAATGACCTGCTGCAGAAGCCACTGTGACAATGTGACCGTGGTTGTTGTTCATCATTGTTGGCAGAAAAGCTCTTGTTGTCTTGAAAAGGATTT ...::.::x.......x...---..::.:.xx..x..-----...x.....:.......x:.x...:..:.:x:x:.x...x..x.....x........x........:..:..:.....:..x...:......:x..x.....x..::....x....xx...x:.x... 20M3D14M5I128M 115/162 71.0% 167/94230402 0.0% 8/162 4.9% 40311524 NA +6365 chr4 + 190214555 87372675 87372674 87372848 174 TAAGAACCAATGAAGGAAACACATGTT-----CACATACCAGTAAGCCAGTAAGAAGGGGACCGAGACATGTCCAGCTGCCGAAGCCACAGTGACAATATGGCCATGGTTATTCTTCGTCATTGCAGGAAGAAATGCCTTTGTAGTCTACAAATAGTTTTTATTAAAAGAGAAAAAATA chr4 - 94230402 47072599 47072598 47072777 47157626 47157625 47157804 179 TAAAATTAAATGAAGAGAGCTGATTTTAAAGTCACTTACCAATAAGCCACCATGAAAGAAGTTACAAATTGACCTGCTGCAGAAGCCACCGTGACTATGTGACCGTGATTGTTCTTCATCATTGTAGGCAGAAAAGCTCTTGTTGTCTTGAAAAGGAGTTTTAAAAAGGGGCAGAAATA ...:.x:x.......::.:.xx..x..-----...x.....:.......x:.x...:.::::::x:.xx..x..x.....x........x.....x..:..:..:..:..:......:......:...x.....x..::....x....xx...x:.xx...xxx...:.:.x.:..... 27M5I147M 118/174 67.8% 179/94230402 0.0% 5/174 2.9% 40300076 NA +3151 chr4 + 190214555 87378808 87378807 87378884 77 TATAAATATAAAATATATATATAAATATATATATATAAATATATATATAAATATATATAAATATATATATATAAATA chr4 - 94230402 71926796 71926795 71926872 22303531 22303530 22303607 77 TATAAATAGCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATA ........xx..x.........xx:.:::..:...:....:.x.:....x.x...x..x...:....x.::..x... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 15452012 NA +3105 chr4 + 190214555 87378902 87378901 87378977 76 ATAAATATATATATATAAATATATATAAATATATATATATATATATTTATATATATATATTTTTTTTTTTTTTTGA chr4 - 94230402 8681913 8681912 8681985 85548418 85548417 85548490 73 ATGGATATCCATGTCTGA---TATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA ..::....x:..:.x.:.---....x.x........:...::.:.:x:...:.....xx.:............... 18M3D55M 53/73 72.6% 73/94230402 0.0% 3/73 4.1% 78696989 NA +3119 chr4 + 190214555 87378902 87378901 87378978 77 ATAAATAT---ATATATATAAATATATATAAATATATATATATATATATTTATATATATATATTTTTTTTTTTTTTTGAG chr4 - 94230402 35241734 35241733 35241813 58988590 58988589 58988669 80 ATAAATTTGTCATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTTGAG ......x.---...xx.......::x...x:.x.:..:.x......:..x.:.:.........x.xx...:......... 8M3I69M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 52137168 NA +3422 chr4 + 190214555 87378924 87378923 87379002 79 ATATAAATATATATATATATATATTTATATATATATATTTTTTTTTTTTTTTGAGATGGTGTCTTGCTCTGTTGTCCAG chr4 - 94230402 8681930 8681929 8682004 85548399 85548398 85548473 75 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTG----ATTGTCCAG ................:...::.:x:.:...:.....x:.:...........xx..x.:xx.:...----:........ 66M4D9M 56/75 74.7% 75/94230402 0.0% 4/75 5.3% 78696994 NA +3003 chr4 + 190214555 87380470 87380469 87380520 51 CAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAGAAAAAGAAAAAA chr4 - 94230402 24662129 24662128 24662179 69568224 69568223 69568274 51 CAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGA .....................xx:...x:.:.........x.:..:.:.:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 62718341 NA +3123 chr4 + 190214555 87380833 87380832 87380905 73 GGGCGACAAAGCTAGAGCTAGACTCTATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTCAGGCCAGG chr4 - 94230402 17904556 17904555 17904628 76325775 76325774 76325847 73 GGGTGACAAGGATAAATGACTGCTGAAGATTAAAAAGAAAAGAAAAAAAAAAAAAGAGAGAACTCAGAACAAG ...:.....:.x..:.xxxxx:..xx.xx.:.....:....:.............:.:.........:x..:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 69476277 NA +6681 chr4 + 190214555 87382251 87382250 87382364 114 TCACCTTCTTTGCAGAGCTGTAAATATCTTCTCGGTTGCTGCAGTCTACCACAAAGGTATGAACCTTGGCACCCAGTCCCTTGCATTTGGCAGCTGTTTCCTCCAGTCCATGCT chr4 - 94230402 47063119 47063118 47063232 47167171 47167170 47167284 114 TTACCTTCTCGGCAGCGCTGTAGATCTCCTCCCTTTTGCTGCAGTCCACCACAAAGGTGTGAACGCTGGCTCCCAGCCCTTCGCATTCTGCTGCCGTCTCCTTGAGGCCATGCT .:.......:x....x......:..x..:..:.xx...........:...........:.....x:....x.....:..:.:.....:x..x..:..:....:x..x....... 114M 88/114 77.2% 114/94230402 0.0% 0/114 0.0% 40319132 NA +11043 chr4 + 190214555 87434927 87434926 87435311 385 TTAATTAATATATTTTTGGTATTTATG----TAAAATGT---TTTTCTTTTTCTCCCCCAGAAACTCGTTTTCATCTTCTTGGTTTCATCTTAATACCAACGTCATGTCTG---GTTCTAATGGTTCCAAAGAAAATTCTCACAATAAGGCTCGGACGTCTCCTTACCCAGGTTCAAAAGTTGAACGAAGCCAGGTTCCTAATGAGAAAGTGGGCTGGCTTGTTGAGTGGCAAGACTATAAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTCAGATCAGGTGAGC-AAATAAGACAGCGTTAGCTGGGAATAAGACTTTTAGAGAAGGTAATGGTTTTATTTGTAAAGTATCTTTTTGACACCTGAAAATA chr4 - 94230402 47077364 47077363 47077743 47152660 47152659 47153039 380 TTAATGAAGAAGTATTCTGTGGTTCTAGGAATAAGGTGTAACTTTTATTTTTTTCTTTCAGTAACTTCTCTGCAGCTCACTGGTCCCACCTCCATCCCATTGACATGTTTGACAGCTGTAACG---CCAAGAATTTCTACCACAACAAAGCTCTCACCTCCCCATATCCCAGATCGCGTGTTGAGCGTACCCATGTTCCTGCAGATAAAGTGGACTGGTTGGCTGAGTGGAAAGATTACCAACCCGTGGAGTACACTGCAATGTCTATTTTGTCTGGACCTCAGTGGGCAGATCCGCAGGTCAGGTGAGTGGAAGGAGGCAG------------GTAGAAATTCTAGTGTCCGTGCTGATTTGTCTTTTCCAGT-CATTTTTGACATGAGAGAATA .....x..x.x:.x..:x..:x..x.:----...::...---....x.....:..:::...x....:x.:.x..x..:x:....::..:..:x..x...x:.x.....:..---.:.x...:.---....::.xxx:.x:.....:..:....xx..x..:..x..:..x:.x..:x:x.....:..x.x...x......:xx..x.......:....:.x.:.......x....:..:x.:..:.....:.........:.x...:.:...x.......:x:............x...:.........:-:..x:..:...------------:..::.x..:...x.xxx..:x..:...xx:..x.xx...-:x.........:xx..:.... 27M4I8M3I69M3I9M3D184M1I11M12D40M1D21M 248/369 67.2% 380/94230402 0.0% 27/369 7.3% 40357563 NA +5290 chr4 + 190214555 87438245 87438244 87438378 134 TTTCTTATTTTACATTGGTATTCTCATTACAGTGAAAGTAATTTTTCTCCCAAGTTTAACGAAAAGGATGGGCATGTTGAGAGAAAGAGCAAGAATGGCCTGTATGAGATTGAAAATGGAAGACCGAGGTAGGT chr4 - 94230402 47078588 47078587 47078719 47151684 47151683 47151815 132 TTTATAACTTCTGATTGCTCTTTCC--CACAGTGATAAAAGTTTCTCTCCCAAATTTAATGAGAGAGATGGAGAAGTGGAGAGGACAAGTTGGAATGGCTTATATGTGGTTGAAAACGGGAGGCCCCGGTGAGT ...x.x.:..:xx....x.x..::.--:.......x.:x.:...:........:.....:..:.::.....:x.x..x.....:.x:..:x:.......:.:....x.:.......:..:..:..xx...::.. 25M2D107M 90/132 68.2% 132/94230402 0.0% 2/132 1.5% 40359657 NA +5412 chr4 + 190214555 87441820 87441819 87441922 103 TTTTTCCAGAAATCCTGCAGGACGGACTGGACTGGTGGGCCGGGGGCTTTTGGGGCGATGGGGCCCAAATCACGCTGCAGATCCCATTATAACCAGGTAAGAA chr4 - 94230402 47079182 47079181 47079284 47151119 47151118 47151221 103 TTATTTCAGAAACCCAGCAGGAAGGACAGGTCTCACAGGGAGAGGGTTACTGGGGCGCTGGGGACCAAACCATGCTGCTGATCCTGTTGTGACCAGGTAAGGA ..x..:......:..x......x....x..x..x:::..xx.:...:.x:.......x.....x.....:..:.....x.....::..:.:..........:. 103M 76/103 73.8% 103/94230402 0.0% 0/103 0.0% 40362638 NA +3019 chr4 + 190214555 87446332 87446331 87446384 53 TCCAAGTGATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197147 18197146 18197199 76033204 76033203 76033256 53 TTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:......x...x.xx.x:.......::...........:....:.x...... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 69249185 NA +7256 chr4 + 190214555 87449122 87449121 87449258 137 TTTTATATTACTATTCACAGATGGAAAAGGGATAGCAGTGGAAATAAAATCATGCATCCTGTTTCTGGGAAGCATATCTTACAATTTGTTGCAATAAAAAGGAAAGACTGTGGAGAATGGGCAATCCCAGGGGTAAG chr4 - 94230402 47080073 47080072 47080209 47150194 47150193 47150330 137 TTTTTTGTCATTTTCTGCAGGTGGAAGAGGGATAGAAGTGGCAATAAAATAGCTCACCCAGTTACTGGCAAAAACATCTTGCAGTTTGTAGCTATCAAGAGAAGAGACTGTGGGGAGTGGGCCATCCCTGGGGTAAG ....x.:.:.:.x.:::...:.....:........x.....x........x::x..:..x...x....x..:x.:.....:..:.....x..x..x..:..:.:.........:..:.....x.....x........ 137M 102/137 74.5% 137/94230402 0.0% 0/137 0.0% 40369049 NA +8319 chr4 + 190214555 87451582 87451581 87451842 261 CTCTTAGGGGATGGTGGATCCAGGAGAGAAGATTAGTGCCACACTGAAAAGAGAATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAACCAGTGCTGAGAAGAGAGAAATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGGTAAGAAATAGTGTTTCTGGGAGGGATTTAGTTCTGTGGATTGATGAAAATGACTTAAAAGTTGACCTGGAAATCTGTATGTCCTTCTCTAAATAAAGTGGAATACT chr4 - 94230402 47080610 47080609 47080864 47149539 47149538 47149793 255 CTGTTAGGGGATGGTGGATCCAGGGGAGAAGATCAGCGCTACTCTTAAGCGGGAATTTGGGGAAGAGGCTTTGAACTCCTTACAGAAATCACCTGAGGAAAAAGCAGAATTGGAAAAGCAACTCCAGAGGCTGTTCAGCCAGGAGCACTTTGTGGTAAGCTGTGTGTCTTTTGGAAGCCCCTGAGCGCTGTAGGTAACCTGCAGTTATTGAGGAACTGA---GGAAGTGTAGCTGTTATTA---AAATAAGCTGTGATACT ..x.....................:........:..:..:..x..x..:x.:........x..:..:...:.x...............x.xxx..xx..:..::x....x.:..::.:x.::.x..x.::..x........:..x...:.x........xx:.:xxx:..:...:..xxx:.x..:x....:.:.x:x:x:x.:.x.:.x.::.::...---....:.x.:xx...:x..x---......:x..x:..... 219M3D19M3D17M 167/255 65.5% 255/94230402 0.0% 6/255 2.4% 40370972 NA +6511 chr4 + 190214555 87454368 87454367 87454458 91 TAGATATATAAGGGATATGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAACTACCATGACGAAACAGGTA chr4 - 94230402 47080978 47080977 47081068 47149335 47149334 47149425 91 TAGGTGTACAGAGGATATGTGGATGACCCTCGTAACACTGATAATGCTTGGATGGAGACAGAGGCTGTGAATTACCACGATGAAACTGGTA ...:.:..:.::........x.....:.....x..............x..............:........:.....:..:.....x.... 91M 77/91 84.6% 91/94230402 0.0% 0/91 0.0% 40373390 NA +3523 chr4 + 190214555 87455737 87455736 87455819 83 CTGCAACCTCTGCCTCTCGGGTTCAGGCGATTCTCCTGCCTCAGACTCTCAAGTAGCTGGTACTACAGGCATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:::.......:.:.x...x.xx.x.....x..:............x......--.:........::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 69258611 NA +9028 chr4 + 190214555 87457826 87457825 87458016 191 TTTTCTTTGGCAACCAGGTGAGATAATGGATAATCTTATGCTAGAAGCTGGAGATGATGCTGGAAAAGTGAAATGGGTGGACATCAATGATAAACTGAAGCTTTATGCCAGTCACTCTCAATTCATCAAACTTGTGGCTGAGAAACGAGATGCACACTGGAGCGAGGACTCTGAAGCTGACTGCCATGCGT chr4 - 94230402 47081823 47081822 47082013 47148390 47148389 47148580 191 TCTTGTTTTGTGGACAGGTGAGACCATGGATAACTTGCCTCTGGAAGCAGGTGATGATGCTGGGATGGTGAAGTGGGTTGACATCAGTGAGAAGCTCAAGCTGTATGCAAATCACAGCTACTTCATTAAGCTCGTGACGGAGAAACGGGGAGCCCACTGGAGTGAGGGACCTGGTCCTGAGTGCCCTGAGT .:..x...x.:::x.........:x........::.xx:x..:.....x..x...........:.x:.....:.....x.......:...x..:..x.....x.....x.:....xx::.x.....:..:..:...:.x........:.:x..x........:....:x:...:xx....x....x..x.. 191M 137/191 71.7% 191/94230402 0.0% 0/191 0.0% 40376003 NA +3106 chr4 + 190214555 87465529 87465528 87465601 73 GTAAGGAAAAGGAAAAG--GAATAGAAATCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAAATTGTGAAT chr4 - 94230402 14757659 14757658 14757733 79472670 79472669 79472744 75 GTGAAAAAATGAAGAAGTTGAAGGAAAATTTACAAAAAAAAAACAAAAAAAAAAACCTGAAAGCAAACAATGTAT ..:.::...x.:.:...--...x::....:.............x...........xxx:....:...:x:..x.. 17M2I56M 53/73 72.6% 75/94230402 0.0% 2/73 2.7% 72707870 NA +9387 chr4 + 190214555 87479426 87479425 87479587 162 TTACCTTCTTTAATTCCAAAGCAGTGGCCCCACTCCTTCAGGGTGATGTGCTTATCCTTGTTGGGGTCACACTCCTCAAAGAAACGGGTTATGCAGTGTTCCATGGGCACCAGAGATGCTCGCAGAGGAGCAAGTTCAGAATGTGTCAAGACTCTGCAATGA chr4 - 94230402 47084019 47084018 47084180 47146223 47146222 47146384 162 TTACCTTCCTTAATCCCAAAACAGCGGCACCACTCCTTCAGAGTGATAAGTTTGTCTTGGTCTCCATCACACTCCTGGAAGAAACGGGTTATGCAGTGTTCCATGGGAACGAGGGAGGCTCTCAAAGGAGCGAGCTCTGAGTGCGTCAGTGATCTGAAGGGA ........:.....:.....:...:...x............:.....:x.:..:..:.x..:xxx:..........x:.............................x..x..:..x....x..:......:..:..x..:..:....:x:x....x.:x.. 162M 125/162 77.2% 162/94230402 0.0% 0/162 0.0% 40395407 NA +10565 chr4 + 190214555 87480339 87480338 87480523 185 AAATCTAGAAATGGAAAGGTAAAGAGTTCTTACCTATCCATAGGGTGTTGGTCAAGTTCACTAAACTGCCAGTGCACAGGATACACATACATGTGGTAGTTTTTCTTAAAGTCCCTTAAGAGAAGATCAATGGGATGGTCCCCAGCCAAAAGCCTCTTTTCATCCAGGTAAATTTTCTTGACCTG chr4 - 94230402 47084473 47084472 47084656 47145747 47145746 47145930 184 AAATC-AGAACTTAACATACAAAGAGTTCTTACCTGTCAACTGGGTGCTGGTCAAGCTGATAAAATTGCCAGTGCACAGGATACACATACATGTGGTAGTTTTTCTCAAAGTCATGCAGGAGAAGCTCAACTGGGTGCTCACCAGACACAAGACGTTTCTCATTCAGGTATATTTTTTTGACCTG .....-....x.x:.x.x::...............:..x.:x.....:........:.x.:x...:........................................:......x:x:.:......x....:x..:..x..x....x..x...x.x:..:....:......x.....:........ 5M1D179M 146/184 79.3% 184/94230402 0.0% 1/184 0.5% 40395866 NA +3277 chr4 + 190214555 87480745 87480744 87480837 93 TTTAAATTCTTTTTTAAACTTTTAAATATTTTAAGTATGTTTTGCCTCTTTCTTTTAACCAAGTAATGTTCGCTGCTTTTTTTTTTTTTTTTT chr4 - 94230402 64107810 64107809 64107902 30122501 30122500 30122593 93 TTTGCAACCTGTGTCTAAGTTCCATATACTTATGGAACTTATTGCTTTTTTTTTTTCCCCTAGGAAAGTTTACTGCCTTTTTTTTTTTTTTTt ...:x.x:..x.x.:x..x..::.x...:..xx:.x.:x.x....:.:...:....xx..x..x..x...::....:................ 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% 23372935 NA +6978 chr4 + 190214555 87482419 87482418 87482569 151 CTTACTTTATTTCTCTGCTTCTCATTTAGATAACCAG-CGTGTTCAGAGTTGGCTTCATAAAGCTGCATGAGGATATTCTTGAGCCAGTCTCTCATCCGTAGAGGAAACTGAATCACTTCAAAGTCCGTACAAGTAGGAATAGCTGTTACAA chr4 - 94230402 47085858 47085857 47086008 47144395 47144394 47144545 151 CTTACCTTATTCCTTTGCTTTTCAGTTAGAAACCCAGGCGTACCCTGA-TCGCGTTCGTAATATTGCATAAGGATGTTTTTGAGCCAGTCTCTCATACGGAGAGGGAACTGATCCACTTCATAATCGGTACAGTGGGGTATGTCTGTGTCAA .....:.....:..:.....:...x.....x.x....-...:::.x..-.:.xx...:...x::.....:.....:..:.................x..x.....:......x:.......x.:..x.....:xx:..x..:x....xx... 37M1I10M1D103M 112/150 74.7% 151/94230402 0.0% 2/150 1.3% 40396561 NA +3671 chr4 + 190214555 87503754 87503753 87503836 83 CTATAACCTCTGCCTCCTAGGCTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATAACAGACATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ...:.:..:xx:x..:..:..:.......x...x..x.x........::.............:x..--..:..::....::.. 66M2D15M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 69306628 NA +3121 chr4 + 190214555 87518741 87518740 87518870 130 ACCCATTAGCTGGAGTTGGGCAACAGGGAAGAAAAAGAGAGAAAAAGAAGACACTTAGGGTTAAGAATTTGTGCTTTGTTTCTTCTGAATTCTAATAGAATACTCCCTTGATTTAGAGAGAATTAGCTCA chr4 - 94230402 20543831 20543830 20543949 73686454 73686453 73686572 119 ATTCATTATTTGACATTAACCAACAGGGAAGAAAAAAAGAGAGAGAGAGAACACATAG----------TTGTTTCTGGTATTATATCAATATAAATTAAATA-TAGCTTTTCGTAGGTAAAATTGTCTCA .::.....x:..:x:..::x................:.....:.:...::....x...----------....x::.x..x.:x.x.x...x:x...x:....-.xx...xx:x...:x.:....:x.... 58M10D34M1D27M 78/119 65.5% 119/94230402 0.0% 11/119 9.2% 66974910 NA +8469 chr4 + 190214555 87529112 87529111 87529276 165 ACAGGGAATAAAA-GTTTGACAAACACCCAAGAAAAACTCTTTAAATCCCTTTCCTCGTTAGCTCTGCTTCTTTGCCCAGAGGCATATTCAAGTCTACTGGAGTTGAAATTCTGCTGCTCTGTCAACTAGTGGGGGTCTGAAGTGACAGACGAGAATTTGGAGGTT chr4 - 94230402 47097356 47097355 47097521 47132882 47132881 47133047 166 ACAGAAAATAAAACTTTTGACAAAATACCATGAGAAACTCTATAAATCCCTTTCCCTTTTATCTCTGCTTCTCTGCCTGGAAACTGATTGATGCCTATTGGAGTTGAAATTCTGCTGTCCTGTCAGCCAGTCAGCGTCTGAAGGGAGAGGTGAGCTTTCAGAGCTT ....::.......-x.........xxx...x..:.......x.............::x...x..........:....::..::.xx...x.x.:...:...................::......:.:...x:.x........x..x..::...xx..::...x.. 13M1I152M 125/165 75.8% 166/94230402 0.0% 1/165 0.6% 40431756 NA +5399 chr4 + 190214555 87542609 87542608 87542908 300 AGTCCTCTATCCCTTACTAGGTAATATTTTCAAACAGGGATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTCTTTCTT----TCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTC--TTTCTTTCCTTCCTTCCTTCTTTCTTTTTTCTTTCTTTCTTTCCTTTCTTTTCTTTCCTTCCTTCCTT------CTTTCCTCCCTTCCTTCTTTCCTT---TCTTTC--------TTTTCTTTCCTTCTTTCCT chr4 - 94230402 70490108 70490107 70490424 23739979 23739978 23740295 317 AGCTCTTCTTTCTTTGCT------TCTTCTCAAACAAATAATTTTGTTCACATGCTGTCACTTGTCCCACTTTTCTTTTCCCGCAGTCATAGTTACTTTCTTACATTTTTACATCCTTTTTTTTTTTTTTTTTTCCCCTCTACCTTGACCTATTGACCTATTGCTTTTACTTCTCAATTTCTTCTGCCATTACCATTCAGGATTTTCTCTTGCTCTCTTATTCCCTTGTTCCCTATATTTCCTGTAATTCCTTTTTTGAGCTACTCAACTACTTTCCATCTCCTCTTACATCTTACAAAATAAATTTTTTTCCATTATTTCCT ..::..::x.:.:..:..------.x..:.......::x.x.:..x:.:x.x.x..x..x:.:x.:.:x:.:..::....::x.xx..x.xx..x.......x.x..:..x.x.:....:..:...:...:....:.:...x:...----.x..xx:..x:.x::...x:....:xx......:.x.--..x.:x.:.xxxx..:::....x..:.:..x..:.:..x..:...x.x...:..x.xx......::..------..:xx..x.:....x...:::...---....x.--------....:..:.x..x...... 18M6D122M4I37M2I68M6I24M3I6M8I19M 181/294 61.6% 317/94230402 0.0% 29/294 9.9% 17052501 NA +3158 chr4 + 190214555 87542641 87542640 87542715 75 AACAGGGATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 22515270 22515269 22515344 71715059 71715058 71715133 75 AAAAGAGATTCTTTTTTCTTTTGTTGCTTTTGTTTGTTTTAAACTTTCCTTCTCTCTCTCTTCCTGCCTAACTTT ..x..:........:..::...x..x....:x..:x...:xxx.....:....:...:....:..x:..xx.... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 65027371 NA +3807 chr4 + 190214555 87542658 87542657 87542796 139 TCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCT chr4 - 94230402 63216368 63216367 63216507 31013896 31013895 31014035 140 TCTTTCTCACTTGCCTTATTTTTCCTTCAGTCCTCTTCATTTTTTGCTTTGTTTTTGTATG-ATTTCTTTAACTTCCTCAGTTCCAACAAATCTTTCCTTTTGTCTACTCAATTATTTTTTCTATCTTTCTTTTTCTTCTT .......:x...x.:..x....:::.::xx:::....:x...:..x....x...:.x.x.x-x.......--....:.:xx...:xx.xxx......:..:.x...x:..xx.:x..:.....x..............::. 61M1D8M2I69M 90/138 65.2% 140/94230402 0.0% 3/138 2.2% 24326290 NA +4177 chr4 + 190214555 87542694 87542693 87542847 154 TTCTTTCTTTCTTTCTTTCTTTCT-TTCTTTCTTTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTT-TCTTTTTCTTTCTTTCCTTCCTTCCTTCTTTCTTTTT------------TCTTTCTTTCTTTCCTTTCTTTTCTTT chr4 - 94230402 45185583 45185582 45185750 49044653 49044652 49044820 168 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..x..:x:....::....:..-x...:xx...::.x:...x........:.......x..:..:x:...::..........xx:....-:....:..x:.:xx.x....::x.:x::.x.....:.------------...:.:x......:..:.:.xx..... 24M1I66M1I37M12I27M 101/154 65.6% 168/94230402 0.0% 14/154 9.1% 42357111 NA +3170 chr4 + 190214555 87542717 87542716 87542791 75 TTTCTTTCTTTCTTCTTTCTTTCTTTC--TCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTC chr4 - 94230402 56151550 56151549 56151626 38078777 38078776 38078853 77 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACTC ...:...:....:x:.....:.x.xx.--.:::...x.x.......:.:.:............::.:......x:.. 27M2I48M 53/75 70.7% 77/94230402 0.0% 2/75 2.7% 31391167 NA +3143 chr4 + 190214555 87542726 87542725 87542784 59 TTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 45600410 45600409 45600468 48629935 48629934 48629993 59 TCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTATTCTTTTACACTTT .:.x...x...:......:...:.....x.....x........:x......:x:x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 41942316 NA +3754 chr4 + 190214555 87542751 87542750 87542914 164 TCTTTCTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCTTTCTTTTTTCTTTCTTTCTTTCCTTTCTTTTCTTTCCTTCCTTCCTTCTTTCCTCCCTTCCTTCTTTCCTTTCTT--TCTTTTCTTTCCTTCTTTCCTTTCTTT chr4 - 94230402 45185590 45185589 45185750 49044653 49044652 49044813 161 TCATTTTCCCTCTTCCTAGTCTCAGT-----TTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..:.::......:.xx.:..xx.-----.....x:...x.......:..:...:.x.:....x::......::..::..xx..:.::::.:.:..x:.:xx.x.....:x.:x.::x..:....xx..x::.:.--...:..x..:::....:.::xx..... 26M5D106M2I27M 95/159 59.7% 161/94230402 0.0% 7/159 4.4% 42357161 NA +4311 chr4 + 190214555 87542779 87542778 87542940 162 TTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCTTTCTTTTTTCT------TTCTTTCTTTCCTTTCTTTTCTTTCCTTCCTTCCTTCTTTCCTCCCTTCCTTCTTTCCTTTCTTTCTTTTCTTTCCTTCT-TTCCTTTCTTTCCTTGCTTTTCTTTTCTTTCTTTCTT chr4 - 94230402 45185576 45185575 45185743 49044660 49044659 49044827 168 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAA-CTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..:x.x...x..x:.:x...:.:::......xx.:..xx......------..........:.....x...:.:x....:....:......xx-.:.....:.:.:..x:..xx.x...:..x:.x...x.-..:..xx.:x:..:.:x.:.::.x......::.::.. 45M6I42M1D37M1I37M 104/161 64.6% 168/94230402 0.0% 8/161 5.0% 42357203 NA +4040 chr4 + 190214555 87542787 87542786 87542944 158 TTTTCTTTCTTTCCTTCCTTCCTTCTTTCTTTT--TTCTTTCTTTCTTTCCTTTCTTTTCTTTCCTTC--CTTCCTTCTTTCCTCCCTTCCTTCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCCTTTCTTTCCTTGCTTTTCTTTTCTTTCTTTCTTCCTT chr4 - 94230402 9693678 9693677 9693835 84536568 84536567 84536725 158 TTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATC-TTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCC---TCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ....xx..:..x.....:.xx::....:..:::--.:.:....x.:.x..-.....:..xxx.x....--..x.:xx:...x..x.x.xx......:.---...::....:.:..::.....:x...:..x.::...:.x..:.........::.:.:.... 33M2I15M1D17M2I28M3D61M 101/154 65.6% 158/94230402 0.0% 8/154 5.2% 77849109 NA +4343 chr4 + 190214555 87542818 87542817 87542977 160 TTTTCTTTCTTTCTTTCCTTTCTTTTCTTTCCTTCCTTCCTTCTTTCCTCCCTTCCTTCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCCTTTCTTTCCT--TGCTTTTCTTTTCTT-TCTTTCTTCCTTCCTTCCTTCTTTCTTTCCCTTCCTTCCATCCTT chr4 - 94230402 45185593 45185592 45185749 49044654 49044653 49044810 157 TTTTCCCTCTTCCTAGTCTCAGTTTTCTG------CTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTT .....::....:..xx:..:xx......x------....x.......:.::...:.x.:....x::.:.:.::.......xx:....:.......:x.:.--.....:..x:.x...-.......xx.:x..:::xx...:.:x...::...::.::.x:... 29M6D65M2I15M1I45M 99/154 64.3% 157/94230402 0.0% 9/154 5.8% 42357225 NA +3076 chr4 + 190214555 87542835 87542834 87542891 57 CTTTCTTTTCTTTCCTTCCTTCCTTCTTTCCTCCCTTCCTTCTTTCCTTTCTTTCTT chr4 - 94230402 54898170 54898169 54898226 39332177 39332176 39332233 57 CTTTTTTTTCTTTGCTCCATTCTTCCTTCCATCCTTTGCTGCTTTACTTTTTTCCTT ....:........x..:.x...:.:...:.x...:..x..x....x....:..:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 32644665 NA +3389 chr4 + 190214555 87542968 87542967 87543081 114 TTCCATCCTTCCTTCCTCCCTTCCT--CCTTTCCTTTCTTTCTTTTCTTTCCTTCTTTCTTTCCTTGCTTTTCTTTTTCTTTCTTCCTTCCTTCCCTCTTTCTTTCTTTCCCTTCC chr4 - 94230402 81583171 81583170 81583286 12647117 12647116 12647232 116 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTTTCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTTCC ...:x.::..::..::....:..x:--....x:.:.x:....::x.:...x:..::.:....xx..x...::.x..xx:....:::.....::...:...x.x...x..x...... 25M2I89M 70/114 61.4% 116/94230402 0.0% 2/114 1.8% 5959797 NA +3686 chr4 + 190214555 87543006 87543005 87543179 174 TCTTTTCTTTCCTTCTTTCTTTCC---------------TTGCTTTTCTTTTT--CTTTCTTCCTTCCTTCCCTCTTTCTTTCTTTCCCTTCCTTCCTTCTGTCCTTCCATCCTTCCTTCCTCCTTTCCTTTCTTTCCTTCTTTCCTTTCTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTCCTTCCC chr4 - 94230402 76984173 76984172 76984347 17246056 17246055 17246230 175 TCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCCTTCCCTCCAGCTT-----CCGCCCTGGCTCGTGTTTTATCT-----------CCTAACATCTCTCACTTTCTTTCTCTTCTGCTGTTACTTCATTCTC ....:..x..::x........::.---------------..:...:....::.--.x....x....:......:.:xx:xx::..............:..::x.:.-----..x:...xx...x.x.::.x...-----------.:.xx:x.....:x............:::x..x.:x....x...:. 24M15I14M2I51M5D23M11D46M 105/158 66.5% 175/94230402 0.0% 33/158 20.9% 10558833 NA +3401 chr4 + 190214555 87543285 87543284 87543351 67 CTGCAGCCTTGACCTCCCAGGCTCAAGCGATCCTCCTACCTCAGCCTTCCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.....:x:.x..:.::..:.....:.x.:.x.xx:x.........:...........:...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 69346159 NA +4790 chr4 + 190214555 87548995 87548994 87549158 164 CCTACACAATCCTCAAATAAACACTAGAGGAAAAGGCTTTTTTATGAAAGTAAACATTTTTTGTCATTCTAAAAGTTTTGGCTTTTGTTGGGGAAGTGCTATTTTCATGTTCAGACAGAGGAATGCCTA-TTTTTACACTACAGCCAGACAAGACTCAACTATTG chr4 - 94230402 47099769 47099768 47099926 47130477 47130476 47130634 158 CCTACGCAAGCTGAAATTAAAAGTTTAAAAAAGAGG------GAGAGAAATAAACATCCCTCCCGGCCCGGGAACATTTGACTCCCGTTGGAGAGGAGCTATTTTAAAGTGCAGACAGAGAGATGGCTATTTTTTGCCCCTCAGCCAGAC-TGACTCAACTAATG .....:...x.:xx..x....x::.x:.::..:...------x.x::..:.......:::.:x:x:::.x::..xx....:..:::.....:..:.x........x.x..x.........::...x...-.....:.x.:x.........-x..........x.. 36M6D87M1I20M1D14M 104/157 66.2% 158/94230402 0.0% 8/157 5.1% 40449226 NA +3062 chr4 + 190214555 87572182 87572181 87572234 53 TCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGC chr4 - 94230402 5847643 5847642 5847695 88382708 88382707 88382760 53 TCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ...x.x:..............:.::.........x.xx.........:x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 81724539 NA +3788 chr4 + 190214555 87605006 87605005 87605123 118 GTTGGATTTTTGAAATGTTTCTTCCTTGCTTAATGAGATTTTAAAAATCGGA-AGTGAACGTTGGATTTTTGAAATGTATTTTATTTGCCTAATGAGTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 60662913 60662912 60663030 33567373 33567372 33567490 118 GTTTAGTTTTTAAATTATTTTGGTTTTAATTAAATAGTTTGCAAACAACATACAGTAGATTTTGATTTTTTAAAGTTTCATTTGTTTGC-TAATAAGATCTTTTTTTTTTTTTTTTTTT ...x::.....:..x.:...:xx::..:x....xx..x..x:...x.x.:x.-...::.:x...:x.....:..:.x.xx...:.....-....:..x.:................... 52M1I36M1D29M 80/117 68.4% 118/94230402 0.0% 2/117 1.7% 26942093 NA +3179 chr4 + 190214555 87611050 87611049 87611102 53 TGTGTGTGTGTGTGCATGTACATGTGTGTATATATGTGTGTGTGTATATATGT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:..::.......:...x:...x.........::..:.:.::. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 16628421 NA +3039 chr4 + 190214555 87643045 87643044 87643098 54 TTGGTTCTTTAATATTCTTAATGTTGGGAAATTTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 75746060 75746059 75746113 18484290 18484289 18484343 54 TCAGTGCTGCACTGTTCTTACTGTTAGAAAGCTTTTGTGTGTGTGTGTGTGTGT .::..x..x:.x.:......x....:.:..::..x................... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 11896985 NA +3195 chr4 + 190214555 87662088 87662087 87662437 350 GACGATGAAGATGACAGTGGAGATGACACCTTTGGTGACGATGACAGTGGCCCAGGGCCCAAAGACAGACAAGAAGGAGGAAACTCCAGACTGGGAAGTGATGAGGACTCTGATGACACCATACAAGCCAGTGAAGAGAGTGCCCCACAAGGGCAAGACAGTGCCCAAGATACCACCAGTGAGAGCAGGGAACTTGACAATGAGGACCGGGTGGACAGCAAGCCTGAGG--GAGGTGACTCCACTCAAGAGAGTGAGAGTGAAGAGCACTGGGTGGGAGGTGGCAGTGATGGGGAGAGCAGCCATGGAGACGGCTCCGAGTTGGACGATGAGGGAATGCAGAGTGATGACCC chr4 - 94230402 47102441 47102440 47102694 47127709 47127708 47127962 254 GACGAGGAGGATGACAGCGGGGATGACACCTTTGATGAGGAT----------------------------AAGGAAGAGG-----------------GTGAAGGGCCTGCTTACGGCACTGGGGACACCAGAGGACATGGT---------------GACAGTAGCAGCAGCAGCAGCAGTGAGAGT-------------GCGATGGCCCCAC-GCCGCCACATCCGATACCGTGGCGGCTC----CAGGTGGGGAGGAGGCAGCAGCAGCAGCCAGGAGG-----ATGATGAGGAGAACA---------------TTGGACTGGGCAGTGAAGGCATGCAGGGTGATGACCC .....x..:........:..:.............:...x...----------------------------...:.:....-----------------....x.:.xx:x..x.:.:...::x:x.x:....x.:.x.x:..---------------......:x.x:x:::.x..x.........:-------------::..x.:..xx::-.x.:x..x::.:..x:--.x..:.:...----..:.x.:.x::...xx.:x....x::.x::.....-----:.....:.....:..---------------::.:::...:.::...:..x......:.......... 42M28D10M17D44M15D30M13D13M1D16M2I10M4D35M5D15M15D37M 162/252 64.3% 254/94230402 0.0% 100/252 39.7% 40559647 NA +3437 chr4 + 190214555 87667339 87667338 87667405 67 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::...x.:..:...x..:....:...::x..:..xx...................x...:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 79271543 NA +3163 chr4 + 190214555 87667340 87667339 87667404 65 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAT chr4 - 94230402 8395801 8395800 8395865 85834538 85834537 85834602 65 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 79271539 NA +3098 chr4 + 190214555 87667348 87667347 87667405 58 TATATATATATATATATATATATATATATATATATACACACACACACACACACACATA chr4 - 94230402 88147180 88147179 88147236 6083167 6083166 6083223 57 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATA ..:..:..x:x..............:.x.:.:...:.:.............-..:... 51M1D6M 45/57 78.9% 57/94230402 0.0% 1/57 1.8% -479832 -93750570 +3373 chr4 + 190214555 87667360 87667359 87667470 111 TATATATATATATATATATATATACACACACACACACACACACATACTTTTTTATATATTATGTATATATTTTGTATAATATGTATATATATACACACATTCTTTTTCATC chr4 - 94230402 30865740 30865739 30865839 63364564 63364563 63364663 100 TATGTATACAAGTATACACACATGTGAACACATACACATGCACATACTTTTT-----------CTTTTGTCTTATATAAAATCCATATTGATGACCATTTTCTTTGTTGTC ...:....:.x:....:.:.:..:::x.....:.....::............-----------:x.x.:.:..:.....x..x:....xx..:xx..:x......x.::.. 52M11D48M 67/100 67.0% 100/94230402 0.0% 11/100 11.0% 56801620 NA +3622 chr4 + 190214555 87695213 87695212 87695323 111 AAGAAAGAAAGAAAGAAAGAGAGAATGAGAGAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAA-----GAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533171 30533170 30533286 63697117 63697116 63697232 116 AAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:..........::.:.:....:x:...xx.x..:....x:..:.xxx:.:.x.....xx....x...:::.x:::..:...:.:.....-----.::..:..:..:..x.... 92M5I19M 71/111 64.0% 116/94230402 0.0% 5/111 4.5% 57162042 NA +4527 chr4 + 190214555 87695250 87695249 87695372 123 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.::.....:...xx.x..:....x..:::xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.:.:...x.... 123M 79/123 64.2% 123/94230402 0.0% 0/123 0.0% 57162086 NA +4021 chr4 + 190214555 87695254 87695253 87695376 123 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:.x.:....:..........::.:.:......:...xx.x:.:....x..::.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:....::::..:..x:.:. 123M 75/123 61.0% 123/94230402 0.0% 0/123 0.0% 57162090 NA +3130 chr4 + 190214555 87695263 87695262 87695322 60 GAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ..........x:.:::.:.:.:.:...:.:.:.....::.....:.......x.x.:... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 10509186 NA +3270 chr4 + 190214555 87695279 87695278 87695340 62 GAGAGAGAGAGAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237699 9237698 9237760 84992643 84992642 84992704 62 GATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ..x.x..x.:.........:x..x::...:.....:....:....:..:...:....::... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 78457580 NA +3069 chr4 + 190214555 87695314 87695313 87695397 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAGAAAGGAGGGAGGGAGGGGGAGGGAAGGGG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx...:.:....:.::.:x.....x::.:.::...:::. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 50837020 NA +3567 chr4 + 190214555 87695375 87695374 87695495 121 GGGAGGGAGGGGGAGGGAAGGGGAGGGAGGGA--------------GGGGAGGGGAGATGGAAGGGAGGGGAGGGAGGGGGATGGAAGGGAGGGAGGGAGGAAAGGAGGAAGGGAGGAAG-GAAGGAAAAACAAGT chr4 - 94230402 63727455 63727454 63727590 30502813 30502812 30502948 136 GGGAGGACGTGGGGTGAAAGGTGCAGGAGTGCTGCAGCTGTGCTCTGGAGAGGTGAGATGGGGGGGGGAGGAGGGAGGTGTGGGGTTGGATGTGGGAGGTAGAAAGATGAGTTGGGGAAGCAAAGGAAAAGCATGT ......:x.x...:x.:....x.x:....x.x--------------..:....x.......::...:.:.........x.x:x..xx..:x.x.:.:.:x::..:..x..:xx.:.....-:........:..x.. 32M14I74M1I15M 80/121 66.1% 136/94230402 0.0% 15/121 12.4% 23967920 NA +3502 chr4 + 190214555 87695391 87695390 87695451 61 GAAGGGGAGGGAGGGAGGGGAGGGGAGATGGAAGGGAGGGGAGGGAGGGGGATGGAAGGGA chr4 - 94230402 7707310 7707309 7707370 86523033 86523032 86523093 61 GAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ..:x..:....:..xx.......:..:.x..:..........x....:....x::...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 79988081 NA +3293 chr4 + 190214555 87695426 87695425 87695489 64 GAGGGGAGGGAGGGGGATGGAAGGGAGGGAGGGAGGAAAGGAGGAAGGGAGGAAGGAAGGAAAA chr4 - 94230402 54766302 54766301 54766363 39464040 39464039 39464101 62 GAGAGATGGGAGTGGGATTAAGGGGAGGGAGGGAGAGGAGTAGGTAGGGAGAAA--AAAGAAAA ...:.:x.....x.....x:.:.............:::..x...x......:..--..:..... 54M2D8M 48/62 77.4% 62/94230402 0.0% 2/62 3.2% 32929124 NA +3103 chr4 + 190214555 87761265 87761264 87761330 66 TTCTGTTTTTGTTTGCTTTGCTTATTTCTGGAACTGTGGTTTCTCTTTAGAATAGATTCAGGTGGA chr4 - 94230402 47104460 47104459 47104525 47125878 47125877 47125943 66 TCCTGCCTGTGTTTGCTGTGCTTATTTTTGGTGCTGAGGTTTCCTGCCAGCATAGCTGCAGGGAGA .:...::.x........x.........:...x:...x......::x::..x....x.x....x:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 40656805 NA +8781 chr4 + 190214555 87811392 87811391 87811910 519 GAGAAGGAAAGTGATGAAGAAGAAGAGGAGGAAGAGGAAGGAAATGAAAACGAAGAAAGCGAAGCAGAAGTGGATGAAAACGAACAAGGCATAAACGGCACCAGTACCAACAGCACAG---AGGCA------GAAAACGGCAACG--GCAGCAGCGGAGGAG----ACAATGGAGAAGAAGGGGAAGAAGAAAGTGTCACTGGAGCCAATGCAGAAGACACCACAGAGACCGGAAGGCAGGGCAAGGGCACCTCGAAGACAACAACCTCTCCAAATGGTGGGTTTGAACCTACAACCCCACCACAAGTCTATAGAACCACTTCCCCACCTTTTGGGAAAACCACCACCGTTGAATACGAGGGGGAGTACGAATACACGGGCGCCAATGAATACGACAATGGATATGAA---------------ATCTATGAAAGTGAGAACGGGGAACCTCGTGGGGACAATTACCGAGCCTATGAAGATGAGTACAGCTACTTTAAAGGACAAGGCTACGATGGCTATG-ATGGTCAGAATTACTACCACCACCAGTGA chr4 - 94230402 47106712 47106711 47107182 47123221 47123220 47123691 471 GATGAGGACAGTGATgaggaagaggaggaagaggaggaggaggaggag------------gaagaagaggtagaggagcaggaTGTCAGTGTCAATGGGACCAGCACCAACACCACAGCAGAGACACCCCATGGGAACAACACCGTGGCAGCTgaggaggaggaggatgatgatgaggaggaggaagaggaagaagaggaggaggaggaAGCTGAAGCCACCACCGCTGCTG------------------------------CCACCACTGCGCAGGATGAGGTGA-----------CCACGTTGGGCGATGAGCAGCGCTCT-------------GAGGTCACTACAGCTGGGGAGCAGTGGGAGTACGA-------GGTGACAGTGGGAGC--CCGCGGGGATGAAGGTCCCACTGAGAGCAGCTATGGGGACCAGGAGGAGCCAGCACGTGGGGACAGCTACCGCGCCTATGAGGATGAGTACGGCTACTACAAGGGGCATGGCTATGA----CATGTATGGGCAGGATTACTACTACAACCAGTGA ..x:....x........:.....:.....:..:.....:.:::.x..:------------....x...:..:..x..:x.x..xxxx:.::.x..:..x.....:.......x.....---..:..------.::...::..x..--.....x.x.......----.::...:x..:..:.:......:...::x.xx:xx.::.xx:.x..x....x......x.xx:.:.------------------------------.x...x..x.:x.x.:..:.x.x:-----------....xx:::.:xxxx..x.x.:..::-------------:.:::...:..x.:..::x.xx..x..........-------..:.x..:..::x:.--.x::..:x.....---------------.x.....:::::x..:.x.:.xx.x.x..........::.....x........:.........:......x:..:..:..x.....:..----:...-....x...:........:..x........ 48M12D58M3I5M6I13M2I15M4I66M30D24M11D26M13D35M7D15M2D13M15I89M4D4M1I29M 290/440 65.9% 471/94230402 0.0% 110/440 25.0% 40704680 NA +3561 chr4 + 190214555 87826294 87826293 87826367 74 CTACAACCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCCTTAGCCTCCCAAGTAGCTAGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:..:xx:x..:.:.........x.x...x.xx.x..:.....::.........:.:...:..x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 69629168 NA +3013 chr4 + 190214555 87826381 87826380 87826428 48 TTTTTTTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTTTTTGCTAGAGA chr4 - 94230402 89666553 89666552 89666600 4563803 4563802 4563850 48 TTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTGTTAGAAA ........x.....x...:.x.....x...x..........:....:. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% -1840172 -92390230 +6788 chr4 + 190214555 87832726 87832725 87832967 242 TGATTATCTGACAACATGATGTCCAAACTGAGGTATTTATAT-------TTTCTGTTTATCCCACTTTCTGGAACATTTGATAGTAGCTTTCTACCACAAACACATTTTTAGATTAAAATTACTTCACCCCCTATGGTTATCTGTGGGCGCTTGTAACAAATTGTTTGCTAGCGCTGAGTGAGCCAGTGCTGATTGGCCATTGGGAACTCTAACAAACTTTAAATTTCAGCAAAATGCCCAGAGACTTC chr4 - 94230402 47107643 47107642 47107870 47122533 47122532 47122760 228 TAATTATCAGGCAAT-TGTGGCCCCAGGGCAGATATTTATACATCGTGCTTTCTGTTTGTGTGGCCAGGTGGAACATTTGATAGCTGCCTGCCACCACAGGCACATTTTTAGATGGAAATTACTCCCCCCC-----GGCACCCGCGGA---TCTTGACAAATGGCCC------------TGGGCTGGAGCTGATTGGCTCTGGGCACCCCTGGGCAACCTTAAATTTCAGCACAGGGTGCAGAGCCCTC .:......x.:...:-..xx.:..x.:xxx..:........:-------.........:.x:x:.:xxx...............:x..:.x.:......::.............x:........:.x....-----.x:.:.:.:..:---.:x.:......x.:::------------..:..::.x..........:x.x..x.x.:..::xx...:.............x.:x.:x.....x.:.. 15M1D26M7I82M5D12M3D16M12D70M 152/221 68.8% 228/94230402 0.0% 28/221 12.7% 40725083 NA +3906 chr4 + 190214555 87870954 87870953 87871027 74 CTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.............x...x:xx.x........::...........:......x.:.... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 69673828 NA +3482 chr4 + 190214555 87881684 87881683 87881853 170 AAGAAAGAAAGAAAGAAAGAAGGAAAGGAGAGAAAGAAAGGAAGAAAGAAAAAGAAAGAGAGAGGGGGAAGGAAGGAAGGAAGGAAGGGAAGGAAGGAAGGAAATTAAAAAAAATTTTTTTTCACCTGGTTA--GATAGATGGAAAAAATAATAATAGAATTTTTTTTTTGA chr4 - 94230402 58845075 58845074 58845229 35385174 35385173 35385328 155 AAAAAAGCATTTAAGCATTAAAAAAAAGAGAGCTGAAATGGAAAAAAAAAAAAAAAAAGGGGGGGGGGGAGGGGAGGGGGCATGTAGATTATGAA-----------ATGACAGATACTTCAGTATCTTGTTGTTGATAAACAGAAAA------AATAGAGTGTTTTTCTAGA ..:....x.xxx...x.xx..::...:.....xx::..x....:...:.....:...::.:.:.....:...:::.::..x.x.x..:xx.x...-----------.x:.x.:..x:..:xx:.:..x...:--....:.::.....------......:.x.....:.x.. 95M11D26M2I13M6D19M 97/153 63.4% 155/94230402 0.0% 19/153 12.4% 29036609 NA +3063 chr4 + 190214555 87881724 87881723 87881766 43 GAAGAAAGAAAAAGAAAGAGAGAGGGGGAAGGAAGGAAGGAAG chr4 - 94230402 41699476 41699475 41699518 52530885 52530884 52530927 43 GAAGAAAAAAAAAAAAAGAGAGAAGGGGGGAGGAGGAAAGAAG .......:.....:.........:....:::.:.....:.... 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 46182248 NA +3045 chr4 + 190214555 87881725 87881724 87881787 63 AAGAAAGAAAAAGAAAGAGAGAGGGGGAAGGAAGGAAGGAAGGAAGGGAAGGAAGGAAGGAAA chr4 - 94230402 37794326 37794325 37794388 56436015 56436014 56436077 63 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAA .:....:.....:...:..:.:.....x:..x:..::...:::..:::....::..::..... 63M 41/63 65.1% 63/94230402 0.0% 0/63 0.0% 50087399 NA +3267 chr4 + 190214555 87899797 87899796 87899860 64 TCTCAAAAAAAAAAGAAAAAAAAAAGAAATGGAGAGTGACGGAGAGGGTACAGGAGCAACTTTT chr4 - 94230402 37425228 37425227 37425291 56805112 56805111 56805175 64 TCTGAAAAAAAAAAGAAAAGAAAAAGAAATAGACAGTGGAGTAGAAAATTAAGGAGTAGATATT ...x...............:..........:..x....:x.x...:::.xx.....:.:x.x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 50474569 NA +3903 chr4 + 190214555 87905600 87905599 87905682 83 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCTCAAGTAGCTGAGATTGCAAGCATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:.........:.x...x..x.x........:...........::.:.:..--.:........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 69708474 NA +3042 chr4 + 190214555 87927699 87927698 87927876 178 TCATGTCTTTCTTCCTTCCTTCCTTCCTCCCTTCCTCCATTCCTCCCTCCCTCCCTCTGTCTCTTTTTTCTTTCTCTTTCTTTCTCTTTCT---------------TTCTT---------------TCTTTCTTTT---CTTTCTTTCTTTCTTTCTTTCTTT-----CTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151412 56151411 56151625 38078778 38078777 38078991 214 TTATGGCTAAGTTCTAATCCCCTTTCTTCCCTTTCACAGCTCCTTACTCT-TCTTTCTTACTCTTATTGTTCTATTACCCTTAATATCTCTCAAGAATAAAACACATACTTGCAGTAGTAGGTAGGTCATGCTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCC-CTTTTTCTTTCTTTCCCTTTTTCTTACT .:...x..xxx...:xx:.::.:...:......:.x.x::....:x...:-..::...xx.....x..x:.:.x.:x::...xx.x.:...---------------.x...---------------..x.x...x.---:...:...:..:.x..:.:...x.-----:.::...x.x.......:.-...............::.:......x.. 50M1D40M15I5M15I10M3I24M5I19M1D28M 116/176 65.9% 214/94230402 0.0% 40/176 22.7% 31776287 NA +3899 chr4 + 190214555 87927772 87927771 87927902 131 CTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCT--------------TTCTTTCTTTCTTTCTTTC--TCTCTTTCTTTTCCT chr4 - 94230402 64977354 64977353 64977500 29252903 29252902 29253049 147 CTTTTTCTTCCCTTTCAATTGTTTTTTTTTTTTCTATCACTTTTTCTTTTTAACTGAGTTCTCTTCCTTTAGTATCTTTATGTCTGCCTTTCTTGATGCACTCAGAGCATATGCTTTCATTCTTTCCTGCAGCCACTTTCTTTTCCT ..:......:.::..:xx..x...:...:......x..x:.:.......:.xx..xxx..:::...:..:xx.x...:.x.x...x:.......xx.--------------.x.....x.......:.x.--:.x............ 97M14I19M2I15M 90/131 68.7% 147/94230402 0.0% 16/131 12.2% 22950418 NA +3005 chr4 + 190214555 87927790 87927789 87927876 87 TTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988810 18988809 18988896 75241507 75241506 75241593 87 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...x..x.::...x.x...:x:.:.:...xx:::.x...:..........:....:...:.:.x...x.xx...:.x:..:..x... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 68938980 NA +3707 chr4 + 190214555 87927803 87927802 87927931 129 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTTCCTTCTCTCTCTCTCTCTCCCTTTCTCTTGCT chr4 - 94230402 45185583 45185582 45185711 49044692 49044691 49044820 129 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x:.....:.:..::..:x...:.:x.:..::..........xx.....:.:....::x..:xx.x::....x.:x:..x....x.. 129M 77/129 59.7% 129/94230402 0.0% 0/129 0.0% 42742220 NA +3175 chr4 + 190214555 87958132 87958131 87958192 61 CTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.........x.:xx...x.xx.x........::.x..:......:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 69760993 NA +3670 chr4 + 190214555 87958414 87958413 87958496 83 CTGTGGCCTTAAACTCCTGGGCTTTGGCAATCCTCCTGCCTCAGCCTCCCAAGTGGCTGGAACTACAGACGCACACCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:::...:x..:..:.....:.:x:.::x.:.x.xx.x........::.....:...........--...::.......... 66M2D15M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 69761288 NA +6673 chr4 + 190214555 87975495 87975494 87975726 232 GCTAGTTAATGATATTGTACATAAGTAATGTTTTAACTGTAGATTGTGTGTGTGCGTTTTTGTTTTTTTTTGTTTTAACCACAAAACCAGAGGGGGAAGTGTGGGAGCAGGTGGGCTGGGCAGTGGCAGAAAACCTCATGACACAATCT--CTCCGCCTCCCTGTG-TTGGTGGAGGATGTCTGCAGCAGCATTTAAATTCTGGGAGGGCTTGGTTGTCAGCAGCAG-CAGGAGGA chr4 - 94230402 47119628 47119627 47119848 47110555 47110554 47110775 221 GCTGGTTAATGATCTTGCCCATAAGTAATGTTTTAACCATAGAGTA---------GCTTTTGTTTGCTTCAG---AAGCCACAAAGCCA-AAGAGGAAGTGGATGAGAACGTGGGCAGGATGGTGGCCAACAGCCTCATGACCTCAGCTTGTTCCGCTGCACAGGGATTGGTGGCTGCTCTCTGGGACAGGGTTTAAATTCCCCACGGGTGCAGATGCCAG--GCAGTCAGGGAGA ...:.........x...:x..................::....x.:---------.:........x:..:x.---x.:.......:...-.:.:.......x:x...x.x......x..:::.....x:.x.:.........x:x.x..--:.....:x.x.x.x.-.......xx.x.x....x::...x:.........:xx:x...:x::.x..:...--....-....::.. 46M9D17M3D14M1D59M2I15M1I54M2D4M1I8M 154/217 71.0% 221/94230402 0.0% 19/217 8.8% 40855867 NA +3220 chr4 + 190214555 88006123 88006122 88006184 62 AAAATACAATTTTTCTTTTCTTTTTCCTTCCTTCCTTCTTTTTTTCTTTCTTCTCTCTCTCT chr4 - 94230402 24479660 24479659 24479721 69750682 69750681 69750743 62 AACATACACTTTTTATAATCTTCTGCCTTCATTTCTGTTTTTTTTCTTTCTCTTTTCTCTTT ..x.....x.....x.xx....:.x.....x..:..x:.............::.:.....:. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 63526463 NA +7966 chr4 + 190214555 88007771 88007770 88008334 564 GGGACGCCAAGCGGCCGCCCGCGCCCC---------GCGCGCCGGAC---CCGGGCCGGCT--GATGGCTGG-------CTGCGCGGCCGTGGGCGCCAGCCTCGCCGCCCCGGGCGGCCTCTGCGAGCAGCGGGGCCTGGAGATCGAGATGCAGCGCATCCGGCAGGCGGCCGCGCGGGACCCCCCGGCCGGAGCCGCGGCCTCCCCTTCTCCTCCGCTCTCGTCGTGCTCCCGGCAGGCGTGGAGCCGCGATAACCCCGGCTTCGAGGCCGAGGAGGAGGAGGAGGAGGTGGAAGGGGAAGAAGGCGGAATGGTGGTGGAGATGGACGTAGAGTGGCGCCCGGGCAGCCGGAGGTCGGCCGCCTCCTCGGCCGTGAGCTCCGTGGGCGCGCGGAGCCGGGGGCTTGGGGGCTACCACGGCGCGGGCCACCCGAGCGGGAGGCGGCGCCGGCGAGAGGACCAGGGCCCGCCGTGCCCCAGCCCAGTCGGCGGCGGGGACCCGCTGCATCGCCACCTCCCCCTGGAAGGGC----AGCCGCCCCGAGTGGCCTGGGCGGAGAGGCTGGTTCGCGGGCTGCGAGGTAAGA chr4 - 94230402 47123034 47123033 47123469 47106934 47106933 47107369 436 GGGAGGCAGCACGGCGGCCCGACCCCCTCTCCCACCGTGCCCCGGGCTTTCCGGGCCGGCCCCGAGGGCGGGGAAGGGGCGGCTCAGCGCCGGGCGATGGCGGC----CCGCGGGCGG-------GAGCAGCTGGAGCTGGGG------------CGGCTCGGGGAAGCGGC---GCGGG-----CCGGTTGCTGCC-------CGCCGTCCCCTCCGCTGTCC---------------GCCTGGAGCCGCGACAACCCGGGCTTCGAGCCCGAGGAGGAGGAGGAGGGAGCGGTGGCGGCG------GGGCCGGCGCTGGAGATGGACGCGGAGTG------GGGTGGCCCCG---CGGCCGCTCCGTC---------CTCGGTGGGC---------------------------------------------AGCGGACGGCGGCAGCGGCG-------------------------GATCCCGGCGGAGGTGCGGGGTCGC----CCCCCGGCGCCCCCCG--AGGGCTCCACGCCGCTCCGCAGCGCCTGGGCCAAGCGGCTGGCACGGCGGCTGCGAGGTGAGA ....x..x:x:....x.....xx....---------.:..x....:.---..........:--..x...x..-------.x..x.:..xx:.....x::..xx.----..x.......-------.......x..:x....:.------------..xx..x..x.:.....---.....-----....::.xx...-------.x..x..:........x..x---------------..x...........:.....x.........x..................::.:..x:.x..x:------..:x:..:.x............::.....------...::...xx:---.......::.x..---------...x......---------------------------------------------.....:x......:x.....-------------------------:::..x.x...x..:.x..:x:...----:.x..:x.x.....:.--.....----x.....:...x:xx........x:..x......:x..xx...........:... 27M9I11M3I11M2I9M7I25M4D10M7D18M12D17M3D5M5D12M7D20M15D63M6D29M6D11M3D13M9D10M45D20M25D25M4D16M2D5M4I54M 304/411 74.0% 436/94230402 0.0% 178/411 43.3% 40884737 NA +3255 chr4 + 190214555 88010993 88010992 88011056 64 AAAGGAAATTGTGTCAGCAGCATGGTGTACAGGAGAGCTTGGCAGAGAGAAAGGAGGCAAGAAG chr4 - 94230402 92540460 92540459 92540523 1689880 1689879 1689943 64 AGAGGAAATGCTTTCAACAATGTGGTGTACAGGAGTGCTTTGCAGAAGGAAAGTTTGCAGGGAG .:.......xx.x...:..:::.............x....x.....::.....xxx...:.:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% -4529467 -89700935 +6767 chr4 + 190214555 88019456 88019455 88019578 123 AGGTCTCTGGGGAACAAGACTCATGGAGGAAAGCAGCACTAACCGAGAGAAATACCTTAAAAGTGTTTTACGGGAACTGGTCACATACCTCCTTTTTCTCATAGTCTTGTGCATCTGTAAGTA chr4 - 94230402 47127290 47127289 47127412 47102991 47102990 47103113 123 AGGTCTGTGGGGCACAAGACTGATGGAAGAAAACAACATGAGCAGAGAGAGATACCTGAGAAGTGTTTTGCGGGAGCTGATTACGTATGTGATCTTCCTTGTTGTGCTGTGTGTCTGTAAGTA ......x.....x........x.....:....:..:..:x.:.x......:......x.:.........:.....:...:.:..:..:x.xx.:..:..::.x..x:....::.......... 123M 92/123 74.8% 123/94230402 0.0% 0/123 0.0% 40892166 NA +3739 chr4 + 190214555 88023100 88023099 88023177 78 GAATAAATAAATAAAATAAATAAATAAATAGAAAAGAAAAAGAAAGAAAAGAGATTTATTTGCCTCATGGTTCTGCAG chr4 - 94230402 79773429 79773428 79773506 14456897 14456896 14456974 78 GAGCCAATATATCATGTATACAAACAGGTAGGAAAAAAAAAGAAAAAAAAGAGCTTTGTTTTCTTCCTAGTTCTTCAG ..::x....x..x.x:..x.:...:.::...:...:.........:.......x...:...x.:..x.:.....x... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 8249671 NA +3572 chr4 + 190214555 88024434 88024433 88024533 100 GCAATAGAGCAACACTCTGTCTCGAAAAAAAAAAAAAAAAAA-AAAAAAAGAAAGAAAGAAGGAAGGAAGGAAAGAAAAAAAAAGGAAAAAATGCAAGGAA chr4 - 94230402 32361521 32361520 32361620 61868783 61868782 61868882 100 GCAAGAGAACTACACTGAGTCTGGAGAAAAAAAAAAAACAGGTAAGAGAATAAAGAGATGAAGCAGCAATAAGTGAGAACCAAA-GAAAAAATGCAATAAA ....x...:.x.....xx....x..:............x.::-..:.:..x.....:.x:.:.x..x..x:.:x..:..xx...-............x:.. 42M1I41M1D16M 71/99 71.7% 100/94230402 0.0% 2/99 2.0% 55662913 NA +3374 chr4 + 190214555 88024439 88024438 88024569 131 AGAGCAACACTCTGTCTCGAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAGGAAGGAAGGAAAGAAAAAAAAAGGAAAAAATGCAAGGAAGGTATTTGGTGAATCT--ATAATAATAAAAATGTATTT chr4 - 94230402 33937889 33937888 33938018 60292385 60292384 60292514 130 AGAATAAGAAATTGTATCACATAAGTGAAGAAAACGAACAAAAATAAAGCACGAGTGATGGAGGGGAAAAAAAAAAAAAAAGAGTATG---GGGAAGTATGCATAGAGTCTGGATAGAGCTAGAGATATGTTT ...::..x.xx:...x..:x.x..:x:..:....x:..x.....x....x.x..:x..x...:..:..:.........::.:.:x...---..:.:....x::xx..:...--...:x:x..:.:..:.:... 88M3D20M2I20M 81/128 63.3% 130/94230402 0.0% 5/128 3.9% 54086550 NA +3092 chr4 + 190214555 88024453 88024452 88024540 88 TCTCGAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAGGAAGGAAGGAAAGAAAAAAAAAGGAAAAAATGCAAGGAAGGTATTT chr4 - 94230402 4674543 4674542 4674630 89555773 89555772 89555860 88 TCTAGAAAACTAAAAAAAAAAAAAAAAGAAGAAGAATACTATAGCAATAGAAAGGTGAAAGTAATAAAATAATGAAATAAAAGTGTTT ...x.....xx................:.....::.x.xx.x::x::x..:..:.x:...:x..x:...x....x..x:..:..:... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 83349910 NA +8568 chr4 + 190214555 88036217 88036216 88036356 140 CAGTGACCTACGGCATGATGAGCTCCAATGTGTACTACTACACCCGGATGATGTCACAGCTCTTCCTAGACACCCCCGTGTCCAAAACGGAGAAAACTAACTTTAAAACTCTGTCTTCCATGGAAGACTTCTGGAAGGTA chr4 - 94230402 47129213 47129212 47129352 47101051 47101050 47101190 140 CAGTGACATACGGGACAGTGAGTTCCAGCATGTATTATTACACGAGGGTTATGTCGCAGCTCTTCCTGGAAACACCTGTATCCAAAATGGAGAAAACGGACTTCAAAACATTGTCCTCAATGGATGACTTCTGGAAGGTA .......x.....x.:::....:....:::....:..:.....xx..:.x.....:...........:..x..x..:..:.......:.........x:....:.....x:....:..x.....x............... 140M 110/140 78.6% 140/94230402 0.0% 0/140 0.0% 40907004 NA +13961 chr4 + 190214555 88038236 88038235 88038508 273 TTCCTTTGCTTTTAGTTCACAGAAGGCTCCTTATTGGATGGGCTGTACTGGAAGATGCAGCCCAGCAACCAGACTGAAGCTGACAACCGAAGTTTCATCTTCTATGAGAACCTGCTGTTAGGGGTTCCACGAATACGGCAACTCCGAGTCAGAAATGGATCCTGCTCTATCCCCCAGGACTTGAGAGATGAAATTAAAGAGTGCTATGATGTCTACTCTGTCAGTAGTGAAGATAGGGCTCCCTTTGGGCCCCGAAATGGAACCGCGTAAGTG chr4 - 94230402 47129430 47129429 47129698 47100705 47100704 47100973 269 TTCCTTTAC----AGTTCACGGAAGGCCCTCTGCTGGATGGTCTCTACTGGGATATGTGGTACAACAATAAAACCATAGCAGAAAACAAAAGCTTCATTTATTATGAGAACCTGCTCCTAGGGGTGCCCCGCATTCGGCAGCTGAAAGTGAGGAATGGTTCATGCTCGATTCCTGAGGATTTAAAAGATGAAATCAAAGACTGCTATGATGTCTACTCTGTGGCCAATGAAGATACTGCACCTTTTGGGCTTCGGAATGGAACAGCGTATGTG .......:.----.......:......:.::.::.......x..x......:.x...::.:x..:...:x.:..::x...x..x...x:...:.....:.x:..............x:.......x..x..x..x.....:..xx:...x..:.....x..x.....x..:..:x....:..:.:.........:.....x....................x:x:.:........xx..x..:.......::..:........x.....x... 9M4D260M 202/269 75.1% 269/94230402 0.0% 4/269 1.5% 40908806 NA +13190 chr4 + 190214555 88043223 88043222 88043462 240 TTTTAATCAGTTGGATCTACACAAGTGAAAAAGACTTGAATGGTAGTAGCCACTGGGGAATCATTGCAACTTATAGTGGAGCTGGCTATTATCTGGATTTGTCAAGAACAAGAGAGGAAACAGCTGCACAAGTTGCTAGCCTCAAGAAAAATGTCTGGCTGGACCGAGGAACCAGGGCAACTTTTATTGACTTCTCAGTGTACAACGCCAACATTAACCTGTTCTGTGTGGTCAGGTGTG chr4 - 94230402 47130400 47130399 47130639 47099764 47099763 47100003 240 TTCAAACCAGTTGGACGTACACCAATGAGAAGGACCTGAACGGGAGCAGCCACTGGGGCTTGCTGGCCACTTACAGTGGAGCTGGTTATTACCAAGACCTCTCAAGGACCAGGGAAGTGACAGCTGTGCAGATTGCCAGCCTTAAGGAGAACCTGTGGTTGGACAGAGGGACAAGAGCAGCTTTCATTGATTTCTCAGTCTACAATGCAAACATCAACCTATTCTGCGTTGTAAGGTATG ..:x..:........:x.....x.:...:..:...:....:..x..:...........xx.xx.x..x.....:...........:.....:.x:..::.x.....:..x..:..:.x:.......::..::....:.....:...:.:..:x.x...:.....x....:..x..:...:....:.....:........x.....:..x.....:.....:.....:..x..x....:.. 240M 179/240 74.6% 240/94230402 0.0% 0/240 0.0% 40912823 NA +14162 chr4 + 190214555 88046590 88046589 88046876 287 GTATTCATGTGTTGTTGTTGTTATTGTTTTAAT-------------TGTTCTTATTTACA--TGCAGGTTATTGGTTGAATTCCCAGCAACAGGTGGTGTGATTCCATCTTGGCAATTTCAGCCTTTAAAGCTGATCCGATATGTCACAACTTTTGATTTCTTCCTGGCAGCCTGTGAGATTATCTTTTGTTTCTTTATCTTTTACTATGTGGTGGAAGAGATATTGGAAATTCGCATTCACAAACTACACTATTTCAGGAGTTTCTGGAATTGTCTGGATGTTGTGATCGTTGTGGTAGGT chr4 - 94230402 47130698 47130697 47130999 47099404 47099403 47099705 302 GTCTTTCCATGTTTTTGTGGACAGTGTTTGAATGAAATAATTTTCTTTTGCTTTTTTAAAATTCCAGGCTGTTAGTGGAATTTCCAGCTACTGGAGGCCTTCTTACATCCTGGCAGTTTCAGCCAGTGAAGCTGATTCACTACATCTCCACTCTGGACTTCTTCCTGGCAGCCTGCGAAATGGTGTTTTGTCTTTTTGTTCTGTACTATATGGTGGAAGAGATCTTAGAAATTCACATTCACAGGCTGCACTACTTCAGAAGTCTCTGGAATTGTCTGGATATCCTTATCATCGTGGTAGGT ..x..:x::....x....x.x:.x.....x...-------------.x.x...x....x.--.x....:.:..:..x.....:.....x..x..x..:x.xx..x....:.....:........xx.:........:.:x..::..x.x...:.x..:.................:..:..x:.x......:.:...:.::.x......:.............x..:.......:........::..:.....:.....:...:.................:.:x.x...:.:......... 33M13I14M2I240M 216/287 75.3% 302/94230402 0.0% 15/287 5.2% 40915892 NA +10314 chr4 + 190214555 88051987 88051986 88052162 176 TCAGCTGTCAGTGGTAGCTATAGGAATTAACATATACAGAACATCAAATGTGGAGGTGCTACTACAG---TTTCTGGAAGATCAAAATACTTTCCCCAACTTTGAGCATCTGGCATATTGGCAGATACAGTTCAACAATATAGCTGCTGTCACAGTATTTTTTGTCTGGATTAAGGTAA chr4 - 94230402 47131523 47131522 47131701 47098702 47098701 47098880 179 TCAGCTCTCCGTGGCAGCGATAGGAATTAGCATCTACAGGACATCAACTGTTGATGTGATCCTGAAGAAGCTAATAGAAGATCAGAACTCATTCCCCAATTTTGAACCCTTGGCATATTGGCAAATACAATTCAACAACATTGCTGCAGTCACTGTGTTTTTTGTCTGGATTAAGGTAA ......x..x....:...x..........:...x.....:.......x...x..x...x.x..:x..---:.xx.:........:..:x.x........:.....:.x::.............:.....:........:..x.....x.....x..:...................... 67M3I109M 142/176 80.7% 179/94230402 0.0% 3/176 1.7% 40920464 NA +13345 chr4 + 190214555 88056048 88056047 88056297 250 TTATCCATTCATCTATTGATGTCTTCTCTCTCTTACAGCTCTTCAAATTCATCAATTTTAACAGGACCATGAGCCAGCTCTCGACAACCATGTCTCGATGTGCCAAAGACCTGTTTGGCTTTGCTATTATGTTCTTCATTATTTTCCTAGCGTATGCTCAGTTGGCATACCTTGTCTTTGGCACTCAGGTCGATGACTTCAGTACTTTCCAAGAGTGTATGTAAGTATATATGAAATTAAGAAGAAAAAT chr4 - 94230402 47132242 47132241 47132485 47097918 47097917 47098161 244 TTGTCTGTTTGTTTGTTTGTTTCTTCTTT---TAACAGCTTTTCAAGTTTGTTAACTTCAACAGAACGATGAGTCAGTTGTCCACAACCATGTCTCGCTGCGTCAAAGATGTCGTTGGCTTTGCAATTATGTTTTTTATCATCTTCTTGGCATATGCACAGTTGGCCTATCTTGTCTTTGGCACTCAGATTGATGACTTCAGCACTTTTCAGGACTGCATGTAAGTA---AAAAAATAAAAAATACAAAT ..:..::..::.:.:..x:.x......:.---.x......:.....:..::.:..:..:.....:..x.....:...:.x..x..............x..:.:......:x.xx..........x........:..:..:..:...:.:..:.....x........x..:..................:.:...........:.....:..:..x..:.........---.x:....x..:..x.x.... 29M3D195M3D20M 188/244 77.0% 244/94230402 0.0% 6/244 2.5% 40923806 NA +3269 chr4 + 190214555 88056954 88056953 88057042 89 TTTTGGGTTTTTGGGGTTTTTTTGTTTTGTTTTTTTTTGTTTTGTTTTGTTTTTGAGGCACGGTCTTGCTCTGTTGCCCAGGCTGGAGT chr4 - 94230402 88833155 88833154 88833236 5397167 5397166 5397248 82 TTTTGGGCTTTCTGGATTTTTTTGTTTTGATTTTTTTTTCTTGATTTGG--TTTGAGG---GTTTTTTGGCTGTTGTT--GGTTGGAGT .......:...:x..:.............x........x:..x:...x.--.......---.x.:..xxx......::--..:...... 49M2D7M3D17M2D9M 64/82 78.0% 82/94230402 0.0% 7/82 8.5% -776201 -93454201 +11518 chr4 + 190214555 88057967 88057966 88058121 155 TGTTTTATTTTTATAGCTTCACTCAATTCCGTATCATTTTGGGCGATATCAACTTTGCAGAGATTGAGGAAGCTAATCGAGTTTTGGGACCAATTTATTTCACTACATTTGTGTTCTTTATGTTCTTCATTCTTTTGGTATGTACATTTTTATTT chr4 - 94230402 47133004 47133003 47133158 47097245 47097244 47097399 155 TGTTTTGTTTTTTAAGATTTACTCAGTTCCGCATCATTTTGGGAGACTTCAACTTCACAGAGGTTGAAGAAGCTAATCGCATTTTGGGACCAATTTATTTCACTACATTTGTGTTCTTTATGTTCTTCATCCTTTTGGTATGTACACCTTTGTTT ......:.....xx..x..:.....:.....:...........x..:x.......::.....:....:...........x:.................................................:...............::...:... 155M 135/155 87.1% 155/94230402 0.0% 0/155 0.0% 40924963 NA +8090 chr4 + 190214555 88061887 88061886 88062018 132 TCCTTTCATTTACAAACAGAATATGTTTTTGGCTATCATCAATGATACTTACTCTGAAGTGAAATCTGACTTGGCACAGCAGAAAGCTGAAATGGAACTCTCAGATCTTATCAGAAAGGTAGGAAAAACCTT chr4 - 94230402 47134283 47134282 47134414 47095989 47095988 47096120 132 TCATTTCTGTCATGAACAGAACATGTTTTTGGCCATTATCAATGATACATACTCTGAAGTCAAATCCGATATGGCTCAGCAGAAGGCAGAAATGGAACTGTCCGACCTTATCAGAAAGGTAAAAGTAATGTT ..x....xx.:.::.......:...........:..:...........x...........x.....:..:x....x........:..x...........x..x..:...............::.:x..:x.. 132M 106/132 80.3% 132/94230402 0.0% 0/132 0.0% 40927604 NA +15895 chr4 + 190214555 88065348 88065347 88065889 542 TCTTTTATTTTTTCTCTCTCTGATAGGGCTACCATAAAGCTTTGGTCAAACTAAAACTGAAAAAAAATACCGTGGATGACATTTCAGAGAGTCTGCGGCAAGGAGGAGGCAAGTTAAACTTTGACGAACTTCGACAAGATCTCAAAGGGTGAGAATCATGCT--TCCTGAGGTTCTGAAAAATTCCTGCTTCTAAAGATAAATTCCTGGTGATAAGAGTATTTCTAGCCCAAGGGCTCATACAGATACTTTTTTTTTTTTTTTCCAGAGGCAGGTATCTTTC--------TGGAACATGTTATAAGAGGAAAACTTGCCCCCATTTGGTGATTTCTC-CTTTCCTCCTGCATTTTGATGTCTCTGTGTTGAGGGTGAACTGGGTACAAGGAATGATTTTTATCTGTATCCTCTCTCTAATTTCAGGAAGGGCCATACTGATGCAGAGATTGAGGCAATATTCACAAAGTACGACCAAGATGGAGACCAAGAACTGACCGAACATGAACATCAGCAGATGAGAGACGACTTGGAGAAAGAGAGGGTGGGTCTGG chr4 - 94230402 47134475 47134474 47134987 47095416 47095415 47095928 513 TTCTTTTTTTTTTTTTTTCCTTTTAGGGCTATAACAAAGCCATGGTCAAACTTAAATTAAAGAAAACCACTGTTGATGACATTTCAGAAAGCTTGAGACAGGGTGGAGGAAAACTAAATTTTGATGAACTCCGGCAAGATCTAAAAGGGTAAGGAAGCTGTTGCTTCTTTTATCTTGAA----------TTGTATGTCCAAATGTTTGATGCTGAG----TCTTTGAC----AAGTTTATCTTGTCTCTGTGATTCCTTCAACACAAATGAAAACAACTTTTGGTTCAGTTGTATCTTGGCTCAGTACAAAAGTTTG-------TTGTGAATGTATTGCTTTTCTAAGACA-------------GAGTTGTTTTTGCACCTGAAAAATGGAAAGTAAGGGATCTGTTTTTACTGCCT--TCTCAGGAAGGGCCACACTGATGCAGAGATTGAGGCAATATTTACCAAATACGATCAGGATGGGGACCAGGAACTGACAGAACATGAACACCAGCAGATGAGAGATGACTTGGAGAAGGAGAGGGTGAGGTTGG .::...x......:.:.::..xx........:x.:.....:x..........x...:.:..:....x:..:..x..............:..::..x.:..:..x.....x..::....:.....:.....:..:........x.......:..:.xxx..:.--.:..xxx:.::....----------..x..x:xx:....x::..:..x.:..----.:.:.::.----::.:.:..x:x.x:x..x.xx..::..:xx:x..:.x.x.:::.x....:--------..x.x.x..x:x:.:x.x:...::...-------...xx:..x.x.:-....:..xxx:..-------------.x....xxxx..x..:x.:x.x.x....x.xxxxxx......x.::x..x:..--.:.............:..........................:..x..:.....:..:.....:.....:........x...........:..............:...........:.........:.x:... 162M2I15M10D27M4D8M4D50M8I27M7D13M1I13M13D53M2D134M 343/502 68.3% 513/94230402 0.0% 51/502 10.2% 40930873 NA +11302 chr4 + 190214555 88067896 88067895 88068067 172 AGGAGGACCTGGATTTGGATCACAGTTCTTTACCACGTCCCATGAGCAGCCGAAGTTTCCCTCGAAGCCTGGATGACTCTGAGGAGGATGACGATGAAGATAGCGGACATAGCTCCAGAAGGAGGGGAAGCATTTCTAGTGGCGTTTCTTACGAAGAGTTTCAAGTGTAAGT chr4 - 94230402 47135143 47135142 47135314 47095089 47095088 47095260 172 AGGAGGATCTGGACTTGGACAGGAGCTCTCTGCCACATCCTCTGAGCAGCCGCAGCTTTTCTCGGAGCTTGGATGACTCTGAGGAAGATGAAGATGAAGACAGTGGGCACAGCTCAAGGAGGAGGGGCAGCAGCTCTAGTGGAGTGTCCTATGAAGAGTTCCAAGTGTAAGT .......:.....:.....:x:x..:...:.:....:...:x..........x..:..::....:...:................:.....x........:..:..:..:.....x..:........x....x:........x..x..:..:........:........... 172M 138/172 80.2% 172/94230402 0.0% 0/172 0.0% 40932753 NA +3334 chr4 + 190214555 88072058 88072057 88072131 74 CTGCAGCCTCAATCTCTCAGGCTCAAGCAATCTTCCCACCTCAGCTTCTCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..x..::::..:.....::x.::x.xx:x......:.:..........:.:......x...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 69874932 NA +3096 chr4 + 190214555 88074103 88074102 88074158 56 TGATTATTTAATTTCCT-----ACCAATTGTTGGGTGTTTTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 16311179 16311178 16311239 77919164 77919163 77919224 61 taattGCTTATTATCTTTCTGCACAATTTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTTT .:...::...x.x..:.-----..x.x.........x........................ 17M5I39M 47/56 83.9% 61/94230402 0.0% 5/56 8.9% 71762924 NA +10863 chr4 + 190214555 88074794 88074793 88074965 172 ACTGTGTTTTCCTTGCAGCCTGGTGAGACGAGTGGACCGGATGGAGCATTCCATCGGCAGCATAGTGTCCAAGATTGACGCCGTGATCGTGAAGCTAGAGATTATGGAGCGAGCCAAACTGAAGAGGAGGGAGGTGCTGGGAAGGCTGTTGGATGGGGTGGCCGAGGTCAGT chr4 - 94230402 47135706 47135705 47135877 47094526 47094525 47094697 172 ATTGTTTGTTGCCCTCAGACTCATGAGGAGGGTGGATCGCATGGAGCACTCCATTGGCAGCATTGTCTCCAAGATTGACGCAGTGATTGTGAAGCTGGAAGCGATGGAGAGAGCCAAACTGAAAAGGAGAGATGTGTTGGGAAGGCTGTTGGATGGAGTGACAGAGGTCAGT .:...x.x..x.::x...x..x:....:x.:.....:..x........:.....:........x..x..............x.....:........:..:::x......x.............:.....:..x...:...................:...:.x......... 172M 138/172 80.2% 172/94230402 0.0% 0/172 0.0% 40939088 NA +13803 chr4 + 190214555 88075439 88075438 88075709 271 TTTCTTTTTCCCTTTTTAGGATGAAAGGCTGGGTCGTGACAGTGAAATCCATAGGGAACAGATGGAACGGCTAGTACGTGAAGAGTTGGAACGCTGGGAATCCGATGATGCAGCTTCCCAGATCAGTCATGGTTTAGGCACGCCAGTGGGACTAAATGGTCAACCTCGCCCCAGAAGCTCCCGCCCATCTTCCTCCCAATCTACAGAAGGCATGGAAGGTGCAGGTGGAAATGGGAGTTCTAATGTCCACGTATGATATGTGTGTTTCAGT chr4 - 94230402 47136658 47136657 47136925 47093478 47093477 47093745 268 TCTATCTCTATCTGTTCAGGATGAAAGGCTGGGCCGTGACAGTGAGATCCACAGGGAGCAGATGGAGAGGCTGGTACGGGAGGAATTGGAGAGGTGGGAGTCAGATGACACAGCATCTCAGATGAGCCATCGTCTGGGAACACCACTGGGACTGAACGGACAGCCTCGGTCAAGGAGCTCCCGGCCATCTTCCTCGCAGT---CAGATGGCATTGATGGTGGAGGAGGAAATGGGGGAAATAACCTCCATGTGTAGCATAGGCTTTGCTGT .:.x.:.:.x:..x..:................:...........:.....:.....:........:x....:.....x..:..:.....:x.x.....:..x.....::....x..:.....x..:...x..:.:..x..:...x.......:..:..x..:.....x:.x..:........x...........x..:.---....x.....x..x....x...x.........:.xxx...:x....:..:.:::..:x.:x..x.x.. 200M3D68M 200/268 74.6% 268/94230402 0.0% 3/268 1.1% 40938781 NA +4198 chr4 + 190214555 88098588 88098587 88098658 71 ATATATCTCTAAGTGTGTGTGTGTATATATATATACATATATAGAGAGAGACAGGGAGAGATAGATAGATA chr4 - 94230402 33398809 33398808 33398879 60831524 60831523 60831594 71 ATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgta ..:...:.xx.......:......:....:.:...:...:.:.........x..:x...........x:.. 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% 54699779 NA +3093 chr4 + 190214555 88114158 88114157 88114206 49 TAATAAAT-TAAAATGTATATTTAAAAAGAGAAAAAGAAAGAAAAAGAAA chr4 - 94230402 26582092 26582091 26582141 67648262 67648261 67648311 50 TAAGAAATCTAGAATGGGTCTTTAAAAAAAGAAAAAGAAAGAAAAAGAAA ...x....-..:....x:.x........:..................... 8M1I41M 43/49 87.8% 50/94230402 0.0% 1/49 2.0% 61532066 NA +3223 chr4 + 190214555 88146938 88146937 88147010 73 GGAGGGAGGAAGGGAGGGAGGGAGGGAACAGGAGAAAGAAAGGAAGGAAAAAGAAAGAAAGAAGAAAGAGAAA chr4 - 94230402 33386346 33386345 33386418 60843985 60843984 60844057 73 GGAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAGAAAGGGA ....:.x::.:..:x:........::..::.:.:....x:...:..x..:.:.....:..x....:.:..::. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 54760592 NA +3350 chr4 + 190214555 88146994 88146993 88147123 130 GAAAGAAGAAAGAGAAAGAAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGTAAAGGAAAGGAAAGGAAAAGAAAAGAAAAGAA---AAAAGAAGAGAGAA----------AAGGAAGGAAAGAAAGTAAAA chr4 - 94230402 16587074 16587073 16587216 77643187 77643186 77643329 143 GAAAAGATGAAGAGGCAGGACTGAAGAGCAGTAAGAAAATAGGAAGAGGGAGGACTGAATGGTAAAGGTAAGCAAAAGAAAATAGGGGAAAACTATTCAAACTAAAAGATAATCTGAGTTTTGAGGCAAAAGAAAAAGTTAAA ....::.x:.....:x..:.xx.:.:..x.:x..::...x.:::.:..::..:.xx...x........x...x...:.....x.:::.....xx.---...xx..:...x..----------:...x.::.:.:.....x... 95M3I14M10I21M 83/130 63.8% 143/94230402 0.0% 13/130 10.0% 71559920 NA +3662 chr4 + 190214555 88147004 88147003 88147085 82 AGAGAAAGAAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGTAAAGGAAAGGAAAGGAAAAGAAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA ...:.x..xx..x.....x...::...:.........:.x..x.:xx.....x.:.:.:.:.:x.:...x............ 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 51288710 NA +3101 chr4 + 190214555 88187077 88187076 88187128 52 GAGCAAGATTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTGGT chr4 - 94230402 41477419 41477418 41477470 52752933 52752932 52752984 52 GACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGT ..x:..x.......x.:...............:....:::........:x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 46709658 NA +3630 chr4 + 190214555 88193802 88193801 88193886 85 TGGCATGATCTTGGCTCACTGCAACCTCCACTTCCTGGATTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACA chr4 - 94230402 18197114 18197113 18197192 76033211 76033210 76033289 79 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ......x..x..------..:..:..:xx.x:.:....:......:.x...x..x.x........::.:.........:...... 12M6D67M 59/79 74.7% 79/94230402 0.0% 6/79 7.6% 69996688 NA +3179 chr4 + 190214555 88202321 88202320 88202384 64 TGCAACATAGGAGGACCCCATCTCTACAATTATTTATATATATATATATATATATATGTATATT chr4 - 94230402 60472183 60472182 60472246 33758157 33758156 33758220 64 TGCAGCATTGAAGTAAACCATCTCTGAATTTAAGAATGCATATATATGTATATATATGTATGTT ....:...x.:..x.xx........:x.x...xxx..::........:.............:.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 27730138 NA +3411 chr4 + 190214555 88230081 88230080 88230149 69 CTCCTGGGTTTAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCGTGTGACACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.......:...:.x...x.xx.x.........:...........:.:....x.:.-----...... 58M5D6M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 70032942 NA +3362 chr4 + 190214555 88247792 88247791 88247852 61 GCAGAGGAGACCAA--AGAAAATGGCATAAAGTAAGGAGAGGTTTTTTGTTGTTTTTTTTTTT chr4 - 94230402 22835452 22835451 22835514 71394889 71394888 71394951 63 GCAAAACAAGCCAATTAGACAGTGGCATGAGGTAAGAAAGGTTTTTTTGTTGTTTTTTTTTTT ...:.:x.::....--...x.:......:.:.....:.::.x..................... 14M2I47M 48/61 78.7% 63/94230402 0.0% 2/61 3.3% 65412340 NA +3694 chr4 + 190214555 88257280 88257279 88257371 92 TGGCATGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCAGGCCTCAGTCTCCCGAGTAACTGGAATAACAGGTGCGC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......x..x..------..:..:..:xx:x..:.::..........x...x....x.....:..::.:....:......:x...x....:. 12M6D74M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 70060166 NA +3470 chr4 + 190214555 88292260 88292259 88292410 151 TATCAACTCACTTAATCCTTACATTAGCCCTAAGAGAAGGGCCAGTGTTGTTATTGTCATCCCCATTTTACAGATGAGGCACAGAGAGAGAGGTTAAGTAACTTGCCTGAGGTCACACAGCTTGTAAATGATGGAGCCAGGATATGAATCC chr4 - 94230402 15485266 15485265 15485411 78744992 78744991 78745137 146 TGTTAATTAAGTAAAACCTCACCATGAACCTGGG----GGCTCAGTGATACTGCCACTTCACAAACTGAGCAGCTGAAGCACAGAGAGGGATGGTAAATGACTTGCCTAAGGTCACAATTCAAGCATGTGGCTGAGGCAAGA-ATGGATCC .:.:..:.x.x.x..x...:..xx.::x...::.----..x:.....x.::.::::::x:x.xx.:.xx:...x...:..........:..x.x...:.:........:........xxx.xx.:.x:..::x...x..:..-...:.... 34M4D104M1D8M 89/146 61.0% 146/94230402 0.0% 5/146 3.4% 72806994 NA +3192 chr4 + 190214555 88329312 88329311 88329398 87 AGCCAGGAACCATGAACAAAAACCTATGTATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 81401272 81401271 81401358 12829045 12829044 12829131 87 AGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGT ...:..:..:x:x...x...:.:x.x.x.:...x.....x..x.x.......:..:x.x..:::...:x..........:.:x:... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 6928040 NA +3384 chr4 + 190214555 88329352 88329351 88329417 66 TATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACTATGTATA chr4 - 94230402 19704285 19704284 19704350 74526053 74526052 74526118 66 TATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ......::.......x.....:...x::..............x:.x.xx.......x.x..x..:. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 68625067 NA +3772 chr4 + 190214555 88332688 88332687 88332781 94 TTTCCCTCCTTCCTTCCTTCCCTCCCTCCCTCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCCTTCCTTC----CTTCCCTCCTTCCTTCCTTTCTTCC chr4 - 94230402 92729604 92729603 92729701 1500702 1500701 1500799 98 tttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC .....:.....:x....:::.x.x:.x...:.:x..::.:....:::.x.:......:.:.:.:..:..----......:..x:.:...:.:...... 69M4I25M 62/94 66.0% 98/94230402 0.0% 4/94 4.3% -4396916 -89833486 +3269 chr4 + 190214555 88332810 88332809 88332901 92 TTCCTTTTCTTTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT chr4 - 94230402 19053884 19053883 19053975 75176428 75176427 75176519 92 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACT ......:::.x..::..x..x.......:x..:..:........xx...:.x::.:::::.:...:.....:.x:...x.x..:.x..:x.. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 69278926 NA +3074 chr4 + 190214555 88332820 88332819 88332921 102 TTCTTTCTTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCTCTT chr4 - 94230402 41570540 41570539 41570641 52659762 52659761 52659863 102 TTCTGACATATATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ....xx.x.x:....:x..:x..x.::..:.x:..:...:...............xx..:x:x.xx:::x...:::......xx....:...:....xx... 102M 64/102 62.7% 102/94230402 0.0% 0/102 0.0% 46762280 NA +3014 chr4 + 190214555 88332827 88332826 88332945 119 TTTCATTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCATTCCTTCCTTCTCTCTTTCTTTCTTTCTCTCTTTCTTTCTC chr4 - 94230402 23468148 23468147 23468266 70762137 70762136 70762255 119 TTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTC ...:.x.x.:..:...:........:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x....:xxx..::..x..x...:..x:.::..:x..:...:..x:.x.:.. 119M 70/119 58.8% 119/94230402 0.0% 0/119 0.0% 64864679 NA +3933 chr4 + 190214555 88334409 88334408 88334491 83 CTTCAACCTCCACTTTCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..x..:..:xx.x:...::........:.x...x..x.x........::..................--:...::....::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 70137283 NA +3384 chr4 + 190214555 88336986 88336985 88337047 62 TTCTCAGGCCCAGTTCCAGTTTGCTCCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGAGATG chr4 - 94230402 18264998 18264997 18265059 75965344 75965343 75965405 62 TTCTCAAACTCTGTTTCACCTTGCTCCATTTTTTTTCTTTTTTTTTTTGTTTATTTTAGATG ......::.:.x...:..x:.......x..:...:.:.:.........x...x...x..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 70071988 NA +3762 chr4 + 190214555 88358859 88358858 88358957 99 TAAAAGCT---GATTTATATATATATATACACACACACACACAAATATATACATATATGTGTGTACATATATGTGTGTGTATATATATATACATATATGTAT chr4 - 94230402 4417331 4417330 4417428 89812975 89812974 89813072 98 TAAAAACTTGAGATTTAGACATATATA----CACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTAT .....:..---......x.:.......----.............:x.:....::..:x.x..x.:..:..:.:.xx:x.:..x..x.......:....x... 8M3I16M4D71M 70/95 73.7% 98/94230402 0.0% 7/95 7.4% 83941528 NA +3109 chr4 + 190214555 88358902 88358901 88358958 57 ATATACATATATGTGTGTACATATATGTGTGTGTATATATATATACATATATGTATA chr4 - 94230402 35554961 35554960 35555017 58675386 58675385 58675442 57 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA .....:x.:x:.......:..:.....x....:.......::.....x.x....:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 52803941 NA +3621 chr4 + 190214555 88379615 88379614 88379756 142 CATTAAAAAATATATATATATAAAAATA----------------------TATATATAAAATATATAA------ATATATATAAT----------ATATAAATAT-ATACAAATATATAATATATAAATATATAATATATAAATATATATAATATATAAATATATAAATATATAACATATA chr4 - 94230402 62847192 62847191 62847372 31383031 31383030 31383211 181 CATAACGAAATAAGTATATATAAATATGATACAAGGAGAACATTCATTTTTGTATATTATACATAAAATCTTTCATATTTATGATTTTTCTGTTGATTTATATATTATATACAGAGATTATATAAGAATATATTATAGAGAGATATATGTAGAATTTAAGTAGAGAAATACATGACATCTA ...x.x:.....x:..........x..:----------------------.:.....x.x.:...x..------....x...:..----------..x..x....-...:.x.x.x..x.....x:.......x...x.x.:......:..:x..x...:..x.x.....:..:....x.. 28M22I18M6I11M10I10M1I75M 105/142 73.9% 181/94230402 0.0% 39/142 27.5% 25532423 NA +3130 chr4 + 190214555 88379620 88379619 88379673 54 AAAAATATATATATATAAAAATATATATATAAAATATATAAATATATATAATAT chr4 - 94230402 69591085 69591084 69591138 24639265 24639264 24639318 54 AAAGATATATAAATACGAAAATATATTTAAAAGATAGATGAATATACCTAATAT ...:.......x...::.........x..x..:...x..:......:x...... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 18788535 NA +4468 chr4 + 190214555 88379621 88379620 88379789 169 AAAATATATAT-ATATAAAAATATATATATAAAATATATA--AATATATATAATATATAAATATATACAAATATATAATATATAAATATATA----ATATATAAATATATATAAT--ATATAAATATATAAATATATAACATATA-AATATATATAATATATAAATATATATATAACAT chr4 - 94230402 16155658 16155657 16155836 78074567 78074566 78074745 179 AAAGTATATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATAATATACATCTATATACTATCATACAATATACAATTATATAAATTACATATGGATGTATACAATTGCAATAAGAAGACAGTTTCCTGGCATGCATTAAATACATGATTTGTGAGTATGAAAATAAAAT ...:.......-...:.:x.x.:..x..x..x......:.--..x:...........:.xx.......x.x:...:......:..x......----.:....::..:....:...--xx....:x.x.:.:x.x:x.::...::.-x.x...:..:..x.:.:.:...:x.x....x.. 11M1I28M2I50M4I19M2I28M1I33M 116/169 68.6% 179/94230402 0.0% 10/169 5.9% 72223963 NA +3763 chr4 + 190214555 88379709 88379708 88379829 121 AATATATAAATATATATAAT-----ATATAAATATATAAATATAT---------AACATATAAATATATATAATATATAAATATATATATAACATATAAATATATATAATATATAAATATATATATAACATATAA chr4 - 94230402 40502233 40502232 40502364 53728039 53728038 53728170 132 AATAAAAAAATACACATACTTATTTGTTTAAAAATACAAAAATGTTATGTGGAAAACACATGAGAATATGAA---TAGAAATATATCTATTTCACAGGAATATATATAATAGATAAATCTATACACTAAATACAA ....x.x.....:.:...x.-----:.x....x...:...x..:.---------....:..:.:x....:x.---..x........x...xx..:.x:.............x......x....:.:x.x...:.. 20M5I20M9I18M3D60M 87/118 73.7% 132/94230402 0.0% 17/118 14.4% 47877476 NA +3633 chr4 + 190214555 88379766 88379765 88379901 136 AATATATAAATATATATATAACATATAAATATATATAATATATAAAT---ATATATATAACATATAAATATATATAATATATAAATATATATATAGCATATAAATATATATAATATATAAATATATATATAATATATAA chr4 - 94230402 40502231 40502230 40502364 53728039 53728038 53728172 134 AAAATAAAAAAATACACATA-CTTATTTGTTTAAA-AATACAAAAATGTTATGTGGAAAACACATGAGAATATGAA---TAGAAATATATCTATTTCACAGGAATATATATAATAGATAAATCTATACACTAAATACAA ..x...x...x...:.:...-.x...xx:.x..x.-....:.x....---..:.:x.x....:..:.:x....:x.---..x........x...xx..:.x:.............x......x....:.:x.x...:.. 20M1D14M1D11M3I26M3D60M 94/131 71.8% 134/94230402 0.0% 8/131 6.1% 47877535 NA +3089 chr4 + 190214555 88380354 88380353 88380424 71 ATATATATATAATATATAAATATATATATATAATATATAAATATATATATATAATATATAAATATATATAT chr4 - 94230402 21430118 21430117 21430188 72800215 72800214 72800285 71 ATATTTTAATAGCGTGCATATATATATATTTGACACATGAACATATGTATATTATATATAAACAACTCTAT ....x.xx...:::.::.x..........x.:.:.:..:..:....:.....x.........:.xx.x... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 66950236 NA +3054 chr4 + 190214555 88383756 88383755 88383818 63 TCAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTATGACAAACACAGTTCCTAAC chr4 - 94230402 48031541 48031540 48031603 46198800 46198799 46198862 63 TCAGATTCAGAAGAAAAAAGAGAAAAGAAAAAAAAAGAAGCCCGGACAAATGCAATTATAAAC ....x:...:..:......:.:....:.........:.::.:xx......::..:..x:x... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 40352215 NA +3115 chr4 + 190214555 88383768 88383767 88383825 58 AAAAAAAAAAAAAAAAAAAAAAAAAAGACTATGACAAACACAGTTCCTAACCTGAAGG chr4 - 94230402 77689937 77689936 77689994 16540409 16540408 16540466 58 AAAAAATAGAAAAAAAAAAAAAAAGCCACGATACCAAACACAATTCCTACTTTAAAAG ......x.:...............:xx..x..:x........:......x::.:..:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 10693831 NA +3032 chr4 + 190214555 88386140 88386139 88386216 77 TTAAATTAACAGAAGACAGATTAAAAGAGAAAAGGCACCCAATTTATCTTTTTTCTTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 52517326 52517325 52517402 41713001 41713000 41713077 77 TTACAGTAATAATGAAATGACTAAAAAGGAAAAGGTACTCAGTGTATTAATCTCTTTCTCTGTGTTTTTTTTCTTTT ...x.x...:.:x::.xx..:.....::.......:..:..:.x...:xx.:.::..:...x.x........:.... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 35868814 NA +3654 chr4 + 190214555 88391885 88391884 88392060 176 TTTCACCATTTCAGCATTAGCTAAGTTTTTCTTTCCTTTCCTTTCCTTTTCCTTTCCCTTTTCC--TCCCCTCCCCACTCCTTTCCCCTCCCTTTCCCTTCCCTCCCC------TCCCCTTCTCCCTCCCCTCCCCTTCTCTCCCTCCCCTCCCCTTCTCTCCCTCCCTCCCCTCCCCCTTCCT chr4 - 94230402 59453997 59453996 59454180 34776223 34776222 34776406 184 TCCCACCTCCTTGGTCCTGTTTAATCTCAGCTCTGCTTGCCCTCCCCCCGACCTGCTCTTTCCCGATGCACCACACGCACCAGCCCCCTTCCTCTCTCTTCTATTCTTCCAAAATCTGCTCCTACTTTCTATTCCACCTACTCCTTCCAGCTTCCACCTCTCCATCCTTGCCCTCCCCCTTACT .::....x::.::.:x:.:x:...x:.:xx..:.x...x..:.:..:::xx.:.x.:....:..--.x.x.:x.x.:.x..xx:.....:...:..:....:x.:.::------..:x..:..x.:.:.:x.:..x:::x....:...xx:::..x:......x...:.x...........x.. 64M2I42M6I70M 100/176 56.8% 184/94230402 0.0% 8/176 4.5% 28937888 NA +3928 chr4 + 190214555 88391936 88391935 88392121 186 CTTTCCCTTTTCCTC-CCCTCCCCACTCCTTTC---CCCTCCCTTTCCCTTCCCT--CCCCTCCCCTTCTCCCTCCCCTCCCCTTCTCTCCCTCCCCTCCCCTTCTCTCCCTCCCTCCCCTCCCCCTTCCTCCCCTCCCCTTCTCCCCTCCACTCCCCCCTCCCCTTCTCCCCTTCCGTTCCCCCTCTCCCC chr4 - 94230402 11552235 11552234 11552421 82677982 82677981 82678168 187 CTCTCCTTTCTCCCGGCTCTCTGTAGTCCCCTCGTGTCCGTCCGCTCCCTTCTCTGTCCCCTTCGTTTCTCCTCGCACTCCTCCCCACTGCTGCGGTTCATCCTCTCTCCT--CCACCGCTCCCCGT--CTCCTCT-CCCGGCTGCCCCCGACTGACGCTGCCTTTCCTCCTCTTCCAGTTGGCGCCCCCCC ..:...:..:...:x-.:...:x:.x...::..---:..x:..x:.......:..--.....:.x:......::x.x....:.::.x..x.:x.xx:..x:.:.......:--..x..x......x.--....:..-...xx..x...:.x...xx.x.:x..::.:....:.....:x.:xx.x:.:.... 15M1I17M3I19M2I54M2D14M2D7M1D55M 116/181 64.1% 187/94230402 0.0% 11/181 6.1% 76839701 NA +3306 chr4 + 190214555 88391958 88391957 88392052 95 CACTCCTTTCCCCTCCCTTTCCCTTCCCTCCCCTCCCCTTCTCCCTCCCCTCCCCTTCTCTCCCTCCCCTCCCCTTCTCTCCCTCCCTCCCCTCC chr4 - 94230402 18501278 18501277 18501372 75729031 75729030 75729125 95 CAATCACTCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCC ..x..x:.:..::.x.......x.:...:....:.....:..:::.:::.:......:x....x..:x.xx::::.....x..x.x:::.::... 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% 69890680 NA +3311 chr4 + 190214555 88418802 88418801 88418873 72 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCACCTGCCTCAGCCTCCGGAATAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.............x.....xx.x........::x:.:.......:.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 70221676 NA +3002 chr4 + 190214555 88424746 88424745 88424834 89 ATAAAATAGAGATAGTGGTATAATGAATCCCATCACCAAGATTCAGCAATTGTCAACATTTTGCCACACTTTTATCTATCACTTTTTTT chr4 - 94230402 49855591 49855590 49855679 44374724 44374723 44374812 89 ATAAATCAGATACAATGGTATTTTCAACATTATCACCACAAATCAAAAGTTATCAAACTTGAACTACACTTTCAGATATTGCTCTTCTT .....x:...x.:.:......xx.x..:x::.......x:.x...:x.:..:....xx..xx:.:.......:.xx...::..:..:.. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 38569155 NA +3037 chr4 + 190214555 88439347 88439346 88439419 73 AAAAAAGAAAGAAAAAGAAAGGAAAGAGAAAGAAAGAAGAAAGAAAGAAAAGGGAAGGGAAAGGGAAAGGGAA chr4 - 94230402 67772357 67772356 67772429 26457974 26457973 26458046 73 AAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAAAAAGAATGGGAA ...:.:....x:.:..:x.:..x.:.....x:..:x.:...:....:::..xx.....:...::...x..... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 20666990 NA +3128 chr4 + 190214555 88439373 88439372 88439444 72 AGAAAGAAAGAAGAAAGAAAGAAAAGGGAAGGGAAAGGGAAAGGGAAGGGAAGGGAAAGGAAAGAAAGAAAG chr4 - 94230402 93871246 93871245 93871310 359093 359092 359157 65 AGAGAGAAAGAGGTACGCAAAAAACGGGAAGGGGAAGGGAAA-------GAAGGGGAAGAAATAAGGCAAAG ...:.......:.x.x.x..:...x........:........-------......:...:..x:.::x.... 42M7D23M 50/65 76.9% 65/94230402 0.0% 7/65 10.8% -5431873 -88798529 +3151 chr4 + 190214555 88471953 88471952 88472001 49 CCTCCCTCCCTCCCTCCTTCCCTTCCTTCTTTCTTTTCTTTTTTTCTTT chr4 - 94230402 36600616 36600615 36600664 57629739 57629738 57629787 49 CCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTT ...:::.:....:...:.......:......:......x...:..:... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 51871337 NA +3062 chr4 + 190214555 88475116 88475115 88475191 76 TCTTTTTTTTTTTTTTTTGCTTTGTTTTGTTTTTCTGCTTTTTGGAGTTCTGATGCATTTTTACTCTTGAAAAAAG chr4 - 94230402 24470883 24470882 24470958 69759445 69759444 69759520 76 TCTTTTTTTTTTTTTTTTAGTTTAGTTTATTATTGGAATAATTGCAGTTCTGATGGATTTTGATGAATGGGGAAAG ..................:x...:x...:..x..xx:x.xx...x..........x.....x.:xxx..:::.... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 64004233 NA +3026 chr4 + 190214555 88477301 88477300 88477362 62 AGGGGGAGGGGAGGGAAGGGGAAGGGAGGGGGAGGGGGGAGAGAAAGAGAAGGGGAGGGGAA chr4 - 94230402 37794326 37794325 37794387 56436016 56436015 56436077 62 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAA ...:::.::::.:::..:...::...:x...x:.........:...:.:.:....:...... 62M 40/62 64.5% 62/94230402 0.0% 0/62 0.0% 50682975 NA +3459 chr4 + 190214555 88477487 88477486 88477613 127 AAGGAGAAGGTGAAGGGAAGGGAACGGAAAGGAAGGGGGAGG----------GGGAGGGGAAGGGGAAGTGGGGGAGGGGAAGGGGAAGGGAGGGGAGGGGATGGGAAGGGAAGGAGGAGGGAGGGAGGGAGGGAAG chr4 - 94230402 8402722 8402721 8402858 85827545 85827544 85827681 137 AAGACCAAGGTGCAGGGGGTGGAAGCAAGGAGGAGAGTGAGGTCAGTGGGCTGCGTGGGGAGGGACATGCTGGAAATGAAGAGGAGAAAGGGCAGGAGGCCCTAGGGGTGGAGGGGTGAGAGGAGGTGGAAGGGAAG ...:xx......x....::x....xx:.:::.:..:.x....----------.x.x.....:..:x.x.:x..::.x.:::...:...:..:x:.....xxx.:..::x...:..:x...:.::..x..:....... 42M10I85M 77/127 60.6% 137/94230402 0.0% 10/127 7.9% 80074765 NA +3302 chr4 + 190214555 88477546 88477545 88477639 94 TGGGGGAGGGGAAGGGG--AAGGGAGGGGAGGGGATGGGAAGGGAAGGAGGAGGGAGGGAGGGAGGGAAGGAAGGAATGAAGGAGGAAGGAAGGAT chr4 - 94230402 76099076 76099075 76099171 18131232 18131231 18131327 96 TAGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAGT .:.:.:.:.:....:..--.:..xx........::..:::.:.:....:....xxx.:.::..x:.....::.:.......::.:x:..x...::. 17M2I77M 58/94 61.7% 96/94230402 0.0% 2/94 2.1% 12378470 NA +3097 chr4 + 190214555 88477553 88477552 88477617 65 GGGGAAGGGGAAGGGAGGGGAGGGGATGGGAAGGGAAGGAGGAGGGAGGGAGGGAGGGAAGGAAG chr4 - 94230402 47054727 47054726 47054791 47175612 47175611 47175676 65 GGGGCAGGGTAAGGGGCGAGAGGGGTCGGGGCGATGGGGAGGAGGGAAGGAGGGATGAGTGAGAG ....x....x.....:x.:......x:...:x.:x::..........:.......x.::x.::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 41422826 NA +3314 chr4 + 190214555 88490251 88490250 88490351 101 AATTTTTTAACCCTTTCAACAACATTATGTGGCAGATTCTGTTTTTC--CCTCATTTTACAGATGGGGAAACTGAGGTACAGAACTATTAGGTAACTTATCCA chr4 - 94230402 10729155 10729154 10729257 83501146 83501145 83501248 103 AATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA ....xx..x.x...:x...:.x.x:.:..x..:..:.xx.xx:.x..--.::..........:....:.........:...x.xxx:...:....:..::... 47M2I54M 67/101 66.3% 103/94230402 0.0% 2/101 2.0% 77761096 NA +3092 chr4 + 190214555 88504980 88504979 88505062 83 TTTGTATCTTTAGGCTTAATGACTTTC---------TCATTTTCTATTTCCTTACTTTTGAGAAATATTTATCTTCTATTTTTATTTTTGTG chr4 - 94230402 9660631 9660630 9660722 84569681 84569680 84569772 92 TCTGTATCCTTATGTGCGTGAACTTACACTTTTAAATCACTTTCTATCTTCTTTTCCTTAGAAAATAAATATTTTCTATTTTTATTTTCATG .:......:...x.:x::xx:....x.---------...:.......:.:...x:::..:::.....xx...:...............::.. 27M9I56M 57/83 68.7% 92/94230402 0.0% 9/83 10.8% 78844349 NA +3506 chr4 + 190214555 88507731 88507730 88507810 80 TTTAAAGCAGGGATGTCCAATCTTTTGGCTTCCCTGGGCCACATGGGAAGAAGAAGAATTGTCTTGGGCCACACATAAAA chr4 - 94230402 9885850 9885849 9885929 84344474 84344473 84344553 80 TTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ..x..xx....:x.:.....:...:..x........:......xx.::x...x.:.....::..x....::..:x...:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 78621881 NA +3727 chr4 + 190214555 88513113 88513112 88513188 76 CCACAACCTCTGCTTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCAC .:...:..:xx:x:.:...........:.x...x..x.x........::.............:....--.:..... 67M2D7M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 70315987 NA +3391 chr4 + 190214555 88538632 88538631 88538692 61 CTCCTGGGTTCACGCTATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.........x.:xx...x.xx.x........::.:.........:......x...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 70341493 NA +3810 chr4 + 190214555 88548749 88548748 88548809 61 CTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.........:.x...x.xx.x.........:...........:......x.:.... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 70351610 NA +3644 chr4 + 190214555 88560035 88560034 88560108 74 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTATAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::..........x...x.xx.x........::.........:.:....:.x.:.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 70362909 NA +3198 chr4 + 190214555 88654373 88654372 88654482 110 TATATATATATATATACACACACACACATAATGTAGATTATATATATATACACACATATAATGTAGATTATATAAAAATGTAGATTATATA------------TATAAATATAATGTATATA chr4 - 94230402 2483184 2483183 2483305 91747098 91747097 91747219 122 TATATATATCTATATACACACACACTCTTGGTGTATGCACTCTTTATAGATATATATTTCATAAAGACAAGAGTACAATGACAGTTATATAGTTACAATCAATTATGACTGCAATATACATA .........x...............x.x.::....x::xx.x.x....x.:.:.:..x.x..:x...:x.x.xx.x....xx::.......------------...:.x.::...:..:... 91M12I19M 74/110 67.3% 122/94230402 0.0% 12/110 10.9% 86171189 NA +3687 chr4 + 190214555 88704936 88704935 88705018 83 CTGCAACCTCCGCCTCCTGGATTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCACCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:....:........x...x..x.x........::.........:.:......x.::.--:....::.. 72M2D9M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 70507810 NA +5051 chr4 + 190214555 88719390 88719389 88719608 219 TCTTTCTTCTTCTTCTTCCTTCT-CCTCCTCTTCCTTCTCCTTTTTCTGTCTCCTCCTACTTCTCCTTGTCCTTTT--------------TCTCCTCCTCCTCCTCC-TTCCCTTCTCCTCCTCCTCCTCTTTCTCCTTCC---------------CTTCTCCTCCTTCTCCTCCTTCCTCTATCTTTTTCTCCTCCTCCTTCTTCTCTTTCCTTTCTCCTTCTTCTCCTCCTCCTTCTCCCCCCCTTCT chr4 - 94230402 92411451 92411450 92411700 1818703 1818702 1818952 250 tcatcccaccccatcttcattccatctccaaacccatctccctgccttaccccatcccatccaaccccatcccattccatcaacatcccatccccttctccttctccattcccatccccatccccgtcaccatctccatccttatcactgtcccatccccatctccatcTCATCCCACCTCTGTCTCCTACTCCTCCTCTTCCAACCCCTCTCCATTCCCATATCCTCCTGCTTACTCTCCCTCCTGCCT ..x.:.:x.::.x.....x...:-:....xxx:..x.....:.x:::.::.:.x...:.:::xx..:::...:x..--------------..:...:.....:....-.....x..:..x:.:..x:.x.:x.....x...---------------.::.x:....x....x...:x.....:...::.x.........:.:.xx.:.:.::.:x.::..x.x.:.....x..:x:......:..:x:.. 23M1I52M14I17M1I33M15I94M 135/219 61.6% 250/94230402 0.0% 31/219 14.2% -3692061 -90538341 +4241 chr4 + 190214555 88730876 88730875 88730956 81 CTGCAGCCTCAAACTCCTGGGTTCAAGCAATCCTCCTGCCTTAGCCTCCCAAGTAGCTAGAGCTACAGGTGTGCCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:.....:x..:..:...........::x.:.x.xx.x..:.....::.........:..:.....x...::.....::. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 70533750 NA +3027 chr4 + 190214555 88751239 88751238 88751279 41 CTCAAAAAACAAACAAGCAAACAAAAAAAAACAAAGAAAAG chr4 - 94230402 64558417 64558416 64558457 29671946 29671945 29671986 41 CCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAG .:..............:...............x..:.x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 24192822 NA +3124 chr4 + 190214555 88825053 88825052 88825135 83 TTTATTGATGAGTAAACTTGGTACTAGAAAATAACCTGTTCAAATTTACATGGAAAGGTAGTGGCAGAACAGAACCTGGAATC chr4 - 94230402 26955800 26955799 26955882 67274521 67274520 67274603 83 TTTCTTGAAAAGTGAAACATACACAAGCAAGCGACTTGCCCAAAGTAGCATGGGAAGACAGTGGCAGAGCATGACCTTAAGTC ...x....x:...:..x:xx::..x..x..:::..:..::....x.x:.....:...::.........:..x:....x:.:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 61869253 NA +3180 chr4 + 190214555 88837720 88837719 88837802 83 AAAAAAAAAAAAAAAAAAAAGCAAAACAAAACAAAATTATGTTAAAATGATTATTTTTAAACAGTGATAAATACATATTAAAA chr4 - 94230402 55640818 55640817 55640900 38589503 38589502 38589585 83 AGACAACAGGAAAAAAAAAAAAAAAACAAAGCAAAATAGTGTTTCCATGATTCTTTTCCTATGAAACTAAATGCATTTCAGAA .:.x..x.::..........:x........:......x:....xxx......x....:xx.:::x:x.....:...x.:.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 33196902 NA +3259 chr4 + 190214555 88837725 88837724 88837801 77 AAAAAAAAAAAAAAAGCAAAACAAAACAAAATTATGTTAAAATGATTATTTTTAAACAGTGATAAAT-----ACATATTAAA chr4 - 94230402 79443303 79443302 79443384 14787019 14787018 14787100 82 AAAAAAAAAAAAAAAGCAAAACAGAACAAAAACCCAAAAAACTATTTGCTTATGAAGGAAGATAAATGAAGAACATATCAAA .......................:.......x:x::xx...x.:x..::..x.:..x::x.......-----......:... 67M5I10M 57/77 74.0% 82/94230402 0.0% 5/77 6.5% 9394422 NA +3380 chr4 + 190214555 88912950 88912949 88913140 191 CAGCCAGGGTGACA-------GAGCAAGACA----GAAGAAAGAAGAAAGAAGAAGAAAG---------AAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGA-AGTAGTAGAAGTAGTAGTAGAGAGAAGGAA------------CAAGAGGAGGAGGAAGAAGAAGA------------AGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGA chr4 - 94230402 59321994 59321993 59322229 34908174 34908173 34908409 236 CAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGAGTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....x.:.:::...-------.....:x...----..:...x.:...:.x....::.:.:---------:.x..x::.x:x...xxxx..x.:...x.:xx.......:.-.::.:....xx..x..xx:x:..x:.:...------------........:..x..x..x...x.------------......:....x.........:......:x:..x......::x..x.. 14M7I10M4I25M9I41M1I30M12I23M12I48M 126/191 66.0% 236/94230402 0.0% 45/191 23.6% 29590956 NA +3325 chr4 + 190214555 88913073 88913072 88913152 80 GAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGA chr4 - 94230402 52928370 52928369 52928449 41301954 41301953 41302033 80 GAGCTGGAAGCAGTAGAACAAGAGCTGGCTGAAGACGAGGAAGAGGAGGATGAACAGGAGCAAAGGGGCTCCGAGGAAGA ...xx...:.x..x....x.....xx..xx..:..x...........:..x.........x..::..:xxxx..:..... 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 35984703 NA +4387 chr4 + 190214555 88913104 88913103 88913420 317 AGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAA-GAGGAAGAA--GAGGAGGAGGAGGA-------AGAAGAAGAGGAAG--AAGTGGAGGAGGAAGAGG--------AAGAGGAAGAAG--------AACA-----------------------------GGAGGAAGAGGAAGAGGAAGAAGAGGAGGAG--GAAGAAGAAGAAGAGGAAGAAGAGGA-GGAAGAAGAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAAGACAAAGAAGAAGAAGTAGTAGAAGTAG chr4 - 94230402 32025273 32025272 32025646 62204757 62204756 62205130 374 AGGGACTGTAACAGAGCTAAGATCAGGGGAAagagaaggaggaagggtgggagggagaaaaggaaaaagggagagaag---gagagagagaACAAGAGGAAAAGAGAAAGGTAGAAAAGTCACGAGGTCTAATTGGGTATTACAAAGATTCTTCCAGGAGAAAGGGATTTTATATGCAAGATGCAAGGTGTGTTATTAAGAGGAAACATGCTGCTACAACACTTGTCTGACATATTGTTCCAGGTACCTCTGAGATAGGGTGAGGGGATGATTAAAAAGACCCACAAAACACATACACACAAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAG ...:.xx.x..x..::xx....x....:.:.....:.:.......::x:.....::..::.:...:...:.::.....---::...::...:x........:.:::.x...x:...:..xx.-....xxx..--.:.x.xx.x:.:..-------..:....::...xx--.x:..x.:..x.x.::.x--------........:x.x--------....-----------------------------x...:x..:.x:..:...x..xx.::.:..x--:x.:..x.x:x.x.x:x.:..x..:.-::...:......:.:......::.:..:x::....:.....:xxx..:...:x..x...:....... 78M3D41M1I9M2I14M7I14M2I18M8I12M8I4M29I31M2I26M1I67M 194/314 61.8% 374/94230402 0.0% 63/314 20.1% 56887831 NA +4634 chr4 + 190214555 88913113 88913112 88913371 259 AAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAG--------GAGGAAGAGGAAGAGGA-AGAAGAACAGGAG---GAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGA------------AGTGGAGGAGGAA---------------GAGGAAGAGGAAGAAGAACAGGAGG------AAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAGA----------------GGAGGAAGAAGAGAAGAGGAA chr4 - 94230402 59321947 59321946 59322266 34908137 34908136 34908456 320 AAGTAGATGAGGAGCAGATGAATCGGGTTGTAGAAGAGGAGGAGCAGCAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGAGTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGATTTTGATCAGTCTGATGACAGCAGTAGAGAAGATGAA ...x:..x..:..:...:x.:.xx:..xx.x:.....:......x..x..x..::.x..x.:x....:.x.x..--------......x:.::...x:.-........xx.:.---..x..x::.x:x..:xxxx..x.:..:x..xx.......:.x:.x:.------------......x..:...---------------........x..x..x.....x.xx.------............x:...............:x:..xx.:...::x..x..----------------.:x:.x..x........x... 74M8I17M1I13M3I47M12I13M15I25M6I49M16I21M 173/259 66.8% 320/94230402 0.0% 61/259 23.6% 29591166 NA +3874 chr4 + 190214555 88913146 88913145 88913370 225 AAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAA--------GAGGAA--GAGGAAGAAGAGGAGGA---------GGAGGAAGAAG--------AAGAGGAAGAAGTGGAGGAGGAAGAGGA------------AGAGGAAGAAGAA------------CAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAGAGGAGGAAGAAGAGAAGAGGA chr4 - 94230402 59321947 59321946 59322222 34908181 34908180 34908456 276 AAGTAGATGAGGAGCAGATGAATCGGGTTGTAGAAGAGGAGGAGCAGCAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGAGTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGA ...x...x......x..:x::.xx::.xx.x.....x.......x.:x..x..:::x..x..x..x.....x.:--------......--...::.x.....:..:.---------.:x.:x...x.--------.:x.:...x.:x.:..:..::.x:.x:.------------..x...x......------------..:........x..x..x...x.x.xx.:x..xx....:.....:.x......:.........:x:..xx..::.. 74M8I6M2I17M9I11M8I28M12I13M12I76M 148/225 65.8% 276/94230402 0.0% 51/225 22.7% 29591199 NA +3408 chr4 + 190214555 88913157 88913156 88913236 80 GAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGA chr4 - 94230402 52928370 52928369 52928449 41301954 41301953 41302033 80 GAGCTGGAAGCAGTAGAACAAGAGCTGGCTGAAGACGAGGAAGAGGAGGATGAACAGGAGCAAAGGGGCTCCGAGGAAGA ...xx.....x..x...:x....:x...xx..:..x...........:..x.........x..::..:xxxx..:..... 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 35984787 NA +3557 chr4 + 190214555 88913236 88913235 88913369 134 AGGAGGAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAGAGGAGGAAGAAGAGAAGAGG chr4 - 94230402 8402729 8402728 8402861 85827542 85827541 85827674 133 AGGTGCAGGGGGTGGAAGCA-AGGAGGAGAGTGAGGTCAGTGGGCTGCGTGGGGAGGGACATGCTGGAAATGAAGAGGAGAAAGGGCAGGAGGCCCTAGGGGTGGAGGGGTGAGAGGAGGTGGAAGGGAAGAGG ...x.x...:..x:....x.-....:..::xx....xx::x.:.xx:x:x.::..:.:...x.xx.:.:.x........::...:.x......xxxx..::.x:....::x:........x:....:....... 20M1D113M 81/133 60.9% 133/94230402 0.0% 1/133 0.8% 80510507 NA +3408 chr4 + 190214555 88913241 88913240 88913320 80 GAGGAGGAAGAAGAAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGA chr4 - 94230402 52928370 52928369 52928449 41301954 41301953 41302033 80 GAGCTGGAAGCAGTAGAACAAGAGCTGGCTGAAGACGAGGAAGAGGAGGATGAACAGGAGCAAAGGGGCTCCGAGGAAGA ...xx.....x..x...:x....:x...xx..:..x...........:..x.........x..::..:xxxx..:..... 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 35984871 NA +4224 chr4 + 190214555 88913281 88913280 88913546 266 AAGAGGAAGAAGAACAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAGAGGAG-------GAAGAAGAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAAGACAAAGAAGAAGAAGTAGTAGAAGTAGTAGTAGAGGGAAGAGGGAAGAAGA--------GGAGGAGGAAGAAG------AAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAGAAGAGGA chr4 - 94230402 59321947 59321946 59322229 34908174 34908173 34908456 283 AAGTAGATGAGGAGCAGATGAATCGGGTTGTAGAAGAGGAGGAGCAGCAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGA----GTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ...x:..x..:..:...:x.:.xx:..xx.x:.....:......x..x.:x..::.x..x.:x....:...x..-------.:..:.:x.:....:x.::...:..:xxx.:.xxx..x....:.x:x..----..xx:..x.:x.::...x::::...:.x::x.:x...--------:.x...x......x------:x:.xx.:.....:..x..x..x...x.x.xx.:x..xx............x:..............::x:..xx....:::x..x.. 74M7I49M4D37M8I14M6I88M 156/262 59.5% 283/94230402 0.0% 25/262 9.5% 29591334 NA +4202 chr4 + 190214555 88913344 88913343 88913570 227 AAGAAGAGGAGGAAGAAGAGAAGAGGA----AGAAGAGGAGGAGGAGGAG-GAAGACAAAGA-AGAAGAAGTAGTAGA--AGTAGTAGTAGAGGGAAGAGGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGA---------------------GGAGGAAGAGG------------AAGAGGAAGAAGAGGAGGAG---------------GAGGAAGAAGAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGA chr4 - 94230402 59321947 59321946 59322229 34908174 34908173 34908456 283 AAGTAGATGAGGAGCAGATGAATCGGGTTGTAGAAGAGGAGGAGCAGCAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGAGTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ...x...x.....:x.::x...xx..:----.............x..x..-:.......x:.-.::..:..:..:.x.--:.x..x.:::...:..x:..:......xxx.:.xxx..x..x::.x:x...xxxx..x.:...x..xx.......:.---------------------...x.....:x------------..........x..x..x..:---------------........:.x......:.........:x...xx.....::x..x.. 27M4I19M1I11M1I15M2I77M21I11M12I20M15I47M 154/227 67.8% 283/94230402 0.0% 56/227 24.7% 29591397 NA +3363 chr4 + 190214555 88913425 88913424 88913554 130 AGAGGGAAGAGGGAAGAAG--AGGAGGAGGAAGAAGAAGAAGAG------GAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAGAAGAGGAGGAAGAGG chr4 - 94230402 8402728 8402727 8402861 85827542 85827541 85827675 134 AAGGTGCAGGGGGTGGAAGCAAGGAGGAGAGTGAGGTCAGTGGGCTGCGTGGGGAGGGACATGCTGGAAATGAAGAGGAGAAAGGGCAGGAGGCCCTAGGGGTGGAGGGGTGAGAGGAGGTGGAAG----GGAAGAGG .::.x.x..:...x:....--........::x..:.xx::x.:.------.:.....::x.x.xx.:.:.x.........:...:.x.:....xxxx..:..x.....:.x:...:....x:....----........ 19M2I23M6I76M4D8M 83/126 65.9% 134/94230402 0.0% 12/126 9.5% 80510697 NA +3033 chr4 + 190214555 88913432 88913431 88913481 50 AGAGGGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAG chr4 - 94230402 18270716 18270715 18270765 75959638 75959637 75959687 50 AGATGGATGTAGAGGATGATGGAGAAGTTGAAGAAGAGGAGGAGGAAGAG ...x...x.x......x..x.:.....xx.....:............... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 70642716 NA +3306 chr4 + 190214555 88945921 88945920 88946039 119 TAGTATATATTATATGCATAGTATATTTATACACACATAGTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATGTAATCCAAATCAGCT chr4 - 94230402 70982586 70982585 70982694 23247709 23247708 23247817 109 TAGGCTATTTCATATA-----TATATTTATTCATGTA----ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGT-CAAGTCATCT ...xx...x.:....:-----.........x..:::.----.::.x.x.x:x...........:........:....:.x:...x..:.:.:.::...:.:.::.::.-...:...x.. 16M5D16M4D67M1D10M 74/109 67.9% 109/94230402 0.0% 10/109 9.2% 17963335 NA +3168 chr4 + 190214555 88945960 88945959 88946017 58 GTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959571 32959570 32959628 61270775 61270774 61270832 58 GTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ...:..:.:::..x....x.....::...:.......:.......:.x......x:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 55986389 NA +3036 chr4 + 190214555 88945971 88945970 88946010 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% -875311 -93355091 +4246 chr4 + 190214555 88953447 88953446 88953513 67 TCTATCTCAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAACATAACATAAACTTTAACAT chr4 - 94230402 79230826 79230825 79230892 14999511 14999510 14999577 67 TCAATCTTCAAAACAAACAAACAAACAATAACAACAACAACAAAAAAACCCACATAAATTTAAATAT ..x....:x...................x..................xx:x.......:..x..:.. 67M 56/67 83.6% 67/94230402 0.0% 0/67 0.0% 9722621 NA +3121 chr4 + 190214555 88953451 88953450 88953525 75 TCTCAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAACATAACATAAACTTTAACATTTTAACCATTTT chr4 - 94230402 21532610 21532609 21532679 72697724 72697723 72697793 70 TCCCAGAAGCAAGCAAGCAAACAAGAACAGCAACAAC-AAAAACACAGTG-AAGGTTTAGCTTTTT---CATTTT ..:..:..:...:...:.......:....:.......-.......:.:::-..:x....:.x....---...... 37M1D12M1D15M3D6M 55/70 78.6% 70/94230402 0.0% 5/70 7.1% 67420841 NA +3006 chr4 + 190214555 88953454 88953453 88953495 42 CAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAACA chr4 - 94230402 68627835 68627834 68627876 25602527 25602526 25602568 42 CAAAAACAAACAAACAAACAAAAATAACAGGAAAAAAAATCA ........................:....:x..x.....x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 20325619 NA +3006 chr4 + 190214555 88953455 88953454 88953493 39 AAAAACAAACAAACAAACAAAAACAACAACAACAAAAAA chr4 - 94230402 3417600 3417599 3417638 90812765 90812764 90812803 39 AAACACACACACACAAACAAAAACAACAACAACAAAAAA ...x...x...x........................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 85535855 NA +3506 chr4 + 190214555 88953455 88953454 88953536 82 AAAAACAAACAAACAAACAAAAACAACAACAACAAAAAACAT---AACATAAACTTTAACATTTTA-------ACCATTTTTAACTA--TACAA chr4 - 94230402 18021893 18021892 18021986 76208417 76208416 76208510 94 AAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTCATCTCTTTAAATAATGACCATCTTTAACTAGTTACAA ....:x..............x...........x........x---..x.x..x.:.:.x.x:....-------.....:........--..... 42M3I21M7I14M2I5M 68/82 82.9% 94/94230402 0.0% 12/82 14.6% 70931562 NA +3193 chr4 + 190214555 88961337 88961336 88961440 104 TGGAATTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACTGAGTCTTGCTCTG----TCATCCAGGCTGGAGTGCAATG-------GCATGATCTCAGTT chr4 - 94230402 76182402 76182401 76182515 18047888 18047887 18048001 114 TAGCATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTTCATCATTAAGGC-AGAGTGTTTTGTGTGCATGCATGGTATCTGTT .:.x..x...:......x.:x.:..:xx........x............:...xx:..xx...:....----....:x....-:.....:xx..-------.....:.x..x... 68M4I10M1D11M7I14M 75/103 72.8% 114/94230402 0.0% 12/103 11.7% 12778935 NA +3048 chr4 + 190214555 88980912 88980911 88980985 74 TTGTGTTGTTTTTCTGCAAGATTTGAAGACCAATAGCAGTTTTAAACATTTTTGGTGCTGCCACTAAGAAAAAA chr4 - 94230402 25856360 25856359 25856433 68373970 68373969 68374043 74 TTGAGTTGTTCTTCTTCCAGATTTGGAGGATAAAAGCAGGTTTAAACAACTTCTTTCCTGTGCATAAAAAAAGA ...x......:....x.x.......:..:x:..x.....x........x:..:xx.x...:xxx...:....:. 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 63124552 NA +3562 chr4 + 190214555 88986209 88986208 88986275 67 CTGCAACCTCCACCTCCCGGGTTCAAGTGACTCTCATGCCTCAGCCTCTCAAGTAGCTGTGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx.x..:.:...........x:..x..x.x........:...........x:.:.... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 70789083 NA +3131 chr4 + 190214555 89035449 89035448 89035519 71 AAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGGAAGGAAGGAGGGGAGGGGAGGGAAGGGAAAAAAAGAAAA chr4 - 94230402 40472546 40472545 40472616 53757787 53757786 53757857 71 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGA ...::.......:....:...:.....:.:..::..::..:.....xxx:..:.:x.::...:.x:...:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 48562903 NA +3419 chr4 + 190214555 89050154 89050153 89050232 79 CTTGCCAGGTATGGAAGTCTCCA--AACAAAACTCATGTCCTTTCTTTCCTCTTCTCTTTTTTTTTCTTTTTTTGAGGCAG chr4 - 94230402 14480350 14480349 14480430 79749973 79749972 79750053 81 CCTGACAAGCACGAAAGAATCCAGTAGGGAAACGAGTTTCCTTTTTTTCTCCTTCTCTTTTTTCTTCTTTCTTCGGTGCAG .:..x..:.:.:.:...xx....--.:x:....xx:.x......:....::............:......:..:.:x.... 23M2I56M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 74569804 NA +3029 chr4 + 190214555 89080982 89080981 89081032 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTACA chr4 - 94230402 59433075 59433074 59433125 34797278 34797277 34797328 51 AAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGAACTACA ..:.::..:...:.:...:.....x:........::.....x......... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 29647907 NA +3469 chr4 + 190214555 89082768 89082767 89082845 78 TGCAGCCTCAACCTCCAAGGCTCAAGTGATCCTCCCAGCTCAGTCTCCCGAGTAGCTAGGACTACAGGAGTGCACCAC chr4 - 94230402 18197127 18197126 18197202 76033201 76033200 76033276 76 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .:.....:x..x..:.x:..:.......x.:.x.xx:......:..::.:.......:.:......--x......... 66M2D10M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 70885641 NA +3733 chr4 + 190214555 89147418 89147417 89147514 97 CTTAATAGTTGTGTGGCTTTGATCAAGTTACTTAATCTCTTTGTGCCCCAGTTTCCTCAACTGTAAAATGAGAATAACAATAATACTTATACTGTAG chr4 - 94230402 11947207 11947206 11947302 82283101 82283100 82283196 96 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAAT-ACAATGCTAACCTTGAAG ..:.x..::......:.:..::x:x...:.........x::....:..........:..xx.:.:......xx....:-.:...:..x.:x:..x.. 78M1D18M 65/96 67.7% 96/94230402 0.0% 1/96 1.0% 77200211 NA +3564 chr4 + 190214555 89157449 89157448 89157533 85 AATAGATATTAATTAATATATAATATATAATATATATAATATAATATATAATATATAATATATAATATATATTATATATAAAACA chr4 - 94230402 22326830 22326829 22326914 71903489 71903488 71903573 85 AATTGATATCAATGCATATATAATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGATTAAAATA ...x.....:...xx.........::..x......:...:..:x.xx..xx.......xx:......:....x..:xx.....:. 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% 66830619 NA +3101 chr4 + 190214555 89158005 89158004 89158059 55 AGAATAATAAAATAAAGTGTGTGTGTGTGTATATGTGTGAGAGAGAGAGAGGGAG chr4 - 94230402 73022747 73022746 73022801 21207602 21207601 21207656 55 AGAAAAAAAAAATAGCATGCATATCTATGTATCTATGTGAGAGGGAGAGAGGGAG ....x..x......:x:..::.:.x.:.....x.:........:........... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 16135258 NA +3100 chr4 + 190214555 89158024 89158023 89158063 40 TGTGTGTGTGTATATGTGTGAGAGAGAGAGAGGGAGGGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...........:.:....x.............:....:.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 70175709 NA +3140 chr4 + 190214555 89158026 89158025 89158110 85 TGTGTGTGTATATGTGTGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGAGACAGAGGGAGAGAAAGAGAAAGAGAGAAGAAAG chr4 - 94230402 17078244 17078243 17078328 77152075 77152074 77152159 85 TGTTTCCATAGGTGTCTAAATGGGGGGGAGGGGGAGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAGATGCAAAAG ...x.x::..x:...x.:.:x.:.:.:.....:.:...............xx..xx......:::.:::.:x.....x:x:.... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 72079782 NA +3436 chr4 + 190214555 89218075 89218074 89218137 63 TCCTCCTGTTTCACTCCAGTGCTGTTCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 78373638 78373637 78373700 15856703 15856702 15856765 63 TTTTCTTCTTTCCCTCCAGTGCTGTCTCGTTTTTCTTTCTTTTCTTTTTCTTTATCATGTCTT .::..:.x....x............::.......:...:....:.....:...x.:x.x.:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 10844437 NA +3061 chr4 + 190214555 89218105 89218104 89218167 63 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTCCAAAGCACTTAGACATAAAAA chr4 - 94230402 72269661 72269660 72269723 21960680 21960679 21960742 63 TTATTTTGTTTTTGTTTTTTTTTCTTTTTTTCTTCATAGCACTGAAGCACTGATGAGGAAAAA ..x....x.....x.........:.......:..:x....x.::.......x.x:x:x..... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 16948444 NA +3270 chr4 + 190214555 89218106 89218105 89218173 68 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTCCAAAGCACTTAGACATAAAAAATAAGG chr4 - 94230402 29756208 29756207 29756275 64474128 64474127 64474195 68 TTATCTTTTTTTTTTTCTTCTTCTTTTTTTGTCTTTCACTGCAAAAAACTCTGACATTAAGAAGCAGG ..x.:...........:..:..:.......x.:...x:..x....:x...:x.....x..:..xx... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 59461898 NA +3024 chr4 + 190214555 89254164 89254163 89254229 66 TGCATGGTTTTCTCTTCCTCCTTCCTTTCCTCTTCCCCTTCCCTTTCTTTTTCCTTCTTTCTCTTT chr4 - 94230402 40974805 40974804 40974870 53255533 53255532 53255598 66 TGTCTGTTTGTTTCTTGTTCAGTGCTGTTTTCTTCCCCTTCTCTTCCTTTCTCCTTTTTCTCCTTT ..:x..x..x.:....x:..xx.x..x.::...........:...:....:.....:..:::.... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 48279359 NA +3131 chr4 + 190214555 89262118 89262117 89262189 72 CCAGTCTCAAAAAAAAAAAAAAAAAAAGAATTGATATGGAATAATCTCCAAAATACATTTTTAAGTAAAACA chr4 - 94230402 22987022 22987021 22987090 71243313 71243312 71243381 69 CTGGTATCAAAAAAAAAAAAAAAAAACAAATTAAAGCAGAATAGTTTAAAAAATAC---TTGAAATAAAGTA .::..x....................x:....:.x:::.....:.:.xx.......---..x..:....::. 56M3D13M 51/69 73.9% 69/94230402 0.0% 3/69 4.3% 66275096 NA +3042 chr4 + 190214555 89270550 89270549 89270597 48 ATATATGTATATAATTTATATATATATATATATATATATATATATATA chr4 - 94230402 78881562 78881561 78881609 15348794 15348793 15348841 48 ATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATA ....x....x......x.......:...:.:.x..........:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 10388988 NA +3322 chr4 + 190214555 89281199 89281198 89281270 72 CTGCAACCTCCACTTCCTGGGTTTAAGCAATTCCCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x:.:.......:...::x...x.xx.x.........:...........:.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 71084073 NA +3135 chr4 + 190214555 89291808 89291807 89291860 53 CCAACACTTGGTACTGTCAGGGCTTTTTTTTTTTTTTTTTTCTCTACTGTTCT chr4 - 94230402 94054468 94054467 94054520 175883 175882 175935 53 CCAACTCCTTGCCCTGTTCAGACTTTTTTTTTTTTTTTTTTCCCTGCTGTTTT .....x.:.x.:x....:x:.:....................:..:.....:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% -4762660 -89467742 +3121 chr4 + 190214555 89291820 89291819 89291867 48 ACTGTCAGGGCTTTTTTTTTTTTTTTTTTCTCTACTGTTCTTAGTATA chr4 - 94230402 33130444 33130443 33130491 61099912 61099911 61099959 48 ACTTCCTGGGCTTTTTTTTTTTTTTTTTTCTCCAGTGTTTTTCATATA ...x:.x.........................:.x....:..x:.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 56161376 NA +3746 chr4 + 190214555 89296640 89296639 89296701 62 TTTTTTCTTGTTTGTGTGTGTGTGTGTGCATATGTATGTGTGTGGGTGTGCACACACATGTG chr4 - 94230402 70982621 70982620 70982682 23247721 23247720 23247782 62 TTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG .....:.....x.......:.......:.......x::.:x:..x.......:.....::.. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 18314019 NA +3454 chr4 + 190214555 89304372 89304371 89304440 69 ATTTTATATCACAGTCCATTATGCAGGCTTGCACACACACACACATACGTATATATATATTTAAGGAAT chr4 - 94230402 88065244 88065243 88065312 6165091 6165090 6165159 69 ATTTTATAACACAGGCAAATATTCTGGTCTAAATACACACACACACACCTATATATATATGGAAAAAAT ........x.....x.x.x...x.x..::.:x.:...........:..x...........xx..::... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 1239128 NA +3794 chr4 + 190214555 89356519 89356518 89356674 156 ATATGTTCTTATTTTTCTTCTT--TCTTTCTTTTTTCTTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTCTTTCTCTCTCTCTCCCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCTCTCTTTCTTTCT chr4 - 94230402 69667732 69667731 69667888 24562515 24562514 24562671 157 ATAGACTTTAGTTTTTTCTTTTGATCTGTTTTGTTTCTGTTTTGGCTTTTCAGTCTCATATCATAATTCATGTTCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTCCACCCACCCATA-CCATTTCCATCTCTTTCCTTTGCTTACT ...x::.:.x:.....::.:..--...x.:..x.....x....xx:.:..:xx.:..x.x::x.xx..:x.x..::::.:...x.:....:...:..xx..............:....x:..x:..x.x-.:x::...x..:..:..::..x...x.. 22M2I105M1D28M 95/155 61.3% 157/94230402 0.0% 3/155 1.9% 19688787 NA +3199 chr4 + 190214555 89356544 89356543 89356615 72 TTCTTTTTTCTTTTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTCTTTCTTTCTTTCCTTC chr4 - 94230402 40193303 40193302 40193374 54037029 54037028 54037100 72 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCC ..x...:x......:...:...x......x:.:..:xx::..:x....:...:..:...:.:.:......:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 49163241 NA +3825 chr4 + 190214555 89356622 89356621 89356746 125 TCTCTCTCCCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCTCTCTTTCTTTCTTTCTCTCCCTCTTTCTCTCTCTTCTTTCTTTCCTTTCTTTCTTCCATCTCCCTCTCCCTCTCTCCCTCTCTC chr4 - 94230402 86872021 86872020 86872141 7358262 7358261 7358382 121 TCTATTCATTTCCTTCCTCTTCTGTCTGCATTCTAATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTC----TTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCCCCATCTC ...x.::x::...:....:::..x...x.x.:.:xx::::xx..:...:.xxx.:......x.:..........----....:.....x..:...::..xx.....:::.:.:......:x.... 74M4D47M 76/121 62.8% 121/94230402 0.0% 4/121 3.3% 2484601 NA +4500 chr4 + 190214555 89380850 89380849 89381062 213 CTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTT-------------------CTTTCTT---TCTTTCTTTCTT------TCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTT---------TCTCTCTTT---CTTTCTTTCTTT-CTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCC---------------------TTCCTTCCTTCCTTCCTCTCCTTCCTTCCTTCTTT chr4 - 94230402 78380979 78380978 78381253 15849150 15849149 15849424 275 CTCTTTTTCTCTCTCCTTTTCTGCAACTGACTTTGACTCAATGGTGGTAACAATTGTCTTGGATTTTTCTTCCTTCGAAGCTTTTTCTTCTTTCTTGGCCTTCTCCTTCTCTTTGTCAGACTTCGGTGTTTTCTCCTTAATCTCTCTTGGTTTATCATCTTTGTTTGCCCGTTCTTCCTTTGGTTTATCTTTCCCATCCTTCCCAAGTGCCTTCGTCTCTGGAGTGGTAGCTGGAATCTtttctttcttttctttatctttttccttcccgcttt ..:.:.....:....:..:.:.x:xx..xx....-------------------:.x....---.:......:...------.:......::..::.xx.:.....::.....:.x..xxx....xx.x....:.:...xx.:......---------...:.x...---.x.....:....-x...x.:.:.:..x.......:xxx.x.....x.::.---------------------...:...:..:...:x...::........:x.... 34M19I7M3I12M6I67M9I9M3I12M1I37M21I35M 147/213 69.0% 275/94230402 0.0% 62/213 29.1% 10999871 NA +3397 chr4 + 190214555 89380854 89380853 89380950 97 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCT---TTCTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..::..::....:..:...:.:...:x.::..:x.x..:.x..::xx:.:.xxx::.:.x.:...................x.---........... 86M3I11M 64/97 66.0% 100/94230402 0.0% 3/97 3.1% 46298929 NA +3286 chr4 + 190214555 89380858 89380857 89380955 98 CTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTT chr4 - 94230402 43081925 43081924 43082022 51148381 51148380 51148478 98 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTT ..x..:..:::....:..:...:.:...:x.::..:x.x..:.x..::xx:.:.xxx::...x.....:.............:.x.xx:.....:... 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 46298933 NA +3171 chr4 + 190214555 89380862 89380861 89381039 178 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 38122941 38122940 38123118 56107285 56107284 56107462 178 CTTGTTCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCTCATGCC ..:x...:.:xx.:x:..::.:.....:.x:..::...:.....x::.:.x:x:::x.xx...x::xx.::x....x..:.:x:.....::.:x::x....::::.x.x....::.x..x.x...:::x:x.x.......:.:.x..:.:..::.:.x:.x.x.:.....:..x.x.. 178M 93/178 52.2% 178/94230402 0.0% 0/178 0.0% 51257921 NA +3037 chr4 + 190214555 89380921 89380920 89380971 51 TTTCTCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTC chr4 - 94230402 18929912 18929911 18929962 75300441 75300440 75300491 51 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTC .....................:..:...:.......xx.:.:x.:.x.:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 70451009 NA +3046 chr4 + 190214555 89380925 89380924 89380975 51 TCTCTCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTCTC chr4 - 94230402 18929912 18929911 18929962 75300441 75300440 75300491 51 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTC .:.............:....:...:.......:...xx.:.:x...x.... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 70451013 NA +3558 chr4 + 190214555 89380929 89380928 89381008 80 TCTCTCTCTCTTTCTTCTTTCTTTTTTTCTTTCTTTCTCTTT--CTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCT chr4 - 94230402 53118144 53118143 53118225 41112178 41112177 41112259 82 TTTATCCTCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT .:.x..:::....x....:.x.x..:..........x...x.--.....:.x....x...x...x..x......:.:..... 42M2I38M 60/80 75.0% 82/94230402 0.0% 2/80 2.5% 36262785 NA +3140 chr4 + 190214555 89380968 89380967 89381041 74 TTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTC----CTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 91731746 91731745 91731822 2498581 2498580 2498657 77 TTTCTC-ATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTT ......-x.........x::..x.....:...::........:..:....:----x.::.....x.:::....:.... 6M1D44M4I23M 54/73 74.0% 77/94230402 0.0% 5/73 6.8% -2350778 -91879624 +3422 chr4 + 190214555 89381054 89381053 89381220 167 TCCTTCTTTCAAAAATTTTTT---TTGGCTGTGGTTCTAAGTTCGAAATACATAAGCTCCTTTCTTT----------TTTCCTTTCCTTTCCTTTTCCTCCTTCCCCTTCCTTTCCTTTTTCCTTTTCCCTTCCCTTCTCTTCCTTTCCCATCCCTTCC-CTTTCTCTCCATTTCCTTTCC chr4 - 94230402 20485537 20485536 20485715 73744688 73744687 73744866 179 TCATCCTTTGGAAATGTTTTTCTCTTTGTCTTTGTTCTGAATATGAATAAGAAATGGTCTTTTTCTGAAAAATATGACTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTT--TTTCCTTTAGCTTATGCTTTAATTTCATATTTATTCC ..x.:....x:...xx.....---..x.::x.x.....:.:.x:...xx.x.x.x.x..:...::.x----------:..x......x::...x::..x..::....:.::.::......::....:.....:..:.:....--.....:x.xx...x:-....xx:.:...x.::x.... 21M3I43M10I65M2D15M1I21M 104/165 63.0% 179/94230402 0.0% 16/165 9.7% 68895517 NA +3163 chr4 + 190214555 89381113 89381112 89381212 100 TCTTTTTTCCTTTCCTTTCCTTTTCCTCCTTCCCCT--------TCCTTTCCTTTTTCC---------TTTTCCCTTCCCT-------TCTCTTCCTTTCCCATCCCTTCCCTTTCTCTCCATT chr4 - 94230402 24861545 24861544 24861668 69368735 69368734 69368858 124 TCTGTTCTCTTTTGCTTTCGTTATGCCACTGGCCCTGGTACAAACCATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATT ...x..:..:...x.....x..x.x.:x..xx....--------:.x...:....x...---------..:.::.......-------....::.......:x..::...:....:...:.... 36M8I15M9I13M7I36M 73/100 73.0% 124/94230402 0.0% 24/100 24.0% 64519568 NA +3130 chr4 + 190214555 89401381 89401380 89401442 62 ACATATTAAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735342 92735341 92735403 1495000 1494999 1495061 62 ACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.x..:x....x.....:...:..:.:......x.x......:.x.........:.x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% -3333961 -90896441 +3386 chr4 + 190214555 89401385 89401384 89401440 56 ATTAAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200272 4200271 4200327 90030076 90030075 90030131 56 ATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ....:............:.:.:..............::...:xxx.......x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 85201113 NA +3071 chr4 + 190214555 89401390 89401389 89401440 51 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.....:...:..:.:........x......:.x.........:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% -3333963 -90896439 +3406 chr4 + 190214555 89401391 89401390 89401444 54 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735356 92735355 92735409 1494994 1494993 1495047 54 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .....:...:..:.:...............:.x.........:.x...:::... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% -3333965 -90896437 +3103 chr4 + 190214555 89456460 89456459 89456560 101 GTTTTTTGTTTTTGTTTTTATTTTTTAATACACAATGTCTCTCATTTAATCAAAAATTATTGAATGTGTCAGAAAACAAGACCAAGTCACTGAAAGCAAGA chr4 - 94230402 29807823 29807822 29807923 64422480 64422479 64422580 101 GTTTGTTAATTTGAATTAAATGTTTTAAAGTAAATTATCTATTATTTTAGGAAAAAATATTGAATGTGTTATATAATAATACCAGGAGAAATAAGGCAAAA ....x..:x...x:x..xx..x......x::.x.x.:...x.:....x.xx.....x............:.x.x..:..x....:.xx.xxx..:....:. 101M 67/101 66.3% 101/94230402 0.0% 0/101 0.0% 59648637 NA +3104 chr4 + 190214555 89462059 89462058 89462101 43 TCCATCTCAAAAAAAAAAAAAAAAGAGAGAGAGAGAGACAAAA chr4 - 94230402 48383078 48383077 48383120 45847283 45847282 45847325 43 TCCATGGGAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAA .....xxx................:.............:.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 41078981 NA +3041 chr4 + 190214555 89462067 89462066 89462105 39 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGACAAAAATCT chr4 - 94230402 25247413 25247412 25247451 68982952 68982951 68982990 39 AAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCT ..............:...........:...:....x... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 64214654 NA +3035 chr4 + 190214555 89509302 89509301 89509354 53 TTGGTAATGTCAATATGTTACAGGAAAAAACAAAAACAAAACAGAACAAAAAA chr4 - 94230402 68874948 68874947 68875000 25355403 25355402 25355455 53 TTGGCATTGGAATTATCTCACAAGCAAAAACAAGAACAAAACAAAACAAAAAA ....:.x..xx.x...x.:...:.x........:.........:......... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 20634354 NA +3022 chr4 + 190214555 89522416 89522415 89522465 50 AGCAAAAAAAAGAAACAAAAAGAAAAAACAATGAGAGAAAGTCATTTCCT chr4 - 94230402 13061614 13061613 13061663 81168740 81168739 81168789 50 AGAAAGAGGAGGAAAAAAAAAAAAAAGAAAATGAGAAAAAGTCATTTTCT ..x..:.::.:....x.....:....:.x.......:..........:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 76460802 NA +3028 chr4 + 190214555 89531044 89531043 89531088 45 AAAAAAAAAAAAAAAAAAAAAAGAAGAAAAGAAAACAAAAAGAAA chr4 - 94230402 39341424 39341423 39341468 54888935 54888934 54888979 45 AAAACAAAGAAGAAAAAAAAAGGAAGAAATGAAAACAAGAAGCAA ....x...:..:.........:.......x........:...x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 50189620 NA +3286 chr4 + 190214555 89573939 89573938 89574028 90 TCAAATCCCAGCTCTGCCATTCATTAGCTGTATGACTTAGAACAATTGATTTAACCTCTCTGTGACTCAGTTTTCTCATCT--CTAAAAATA chr4 - 94230402 50431074 50431073 50431165 43799238 43799237 43799329 92 TTAAATCCCAGCACAGGCATTCATTCAGTGTGTGACCTCAGGCAACAGACTTGACCTCCTTCTGGTTCAGTCAATTCAGCTAGCTAAGAGCA .:..........x.x.x........x:x...:....:.x:::...:x..:..:.....::.x..::.....:xx:...x..--....:.::. 81M2I9M 60/90 66.7% 92/94230402 0.0% 2/90 2.2% 39142865 NA +3402 chr4 + 190214555 89639843 89639842 89639890 48 AAATACATATATACGTATATATATATGTATATATATGTGTGTGTATAT chr4 - 94230402 19704278 19704277 19704325 74526078 74526077 74526125 48 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ......................x.:.....:.x:..........:.:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 69935565 NA +3143 chr4 + 190214555 89639871 89639870 89639953 83 ATATATATGTGTGTGTATATATACGTATATATATACATATATATACACACACATATATATACGTATATATACACACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:.:......:...x.:.:....x..:...::...::x....:xx.:.:.:.:.:..::.:.:.x.....x..:x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 81244083 NA +3013 chr4 + 190214555 89639937 89639936 89639999 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043524 NA +3012 chr4 + 190214555 89639945 89639944 89639991 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368263 NA +3013 chr4 + 190214555 89639959 89639958 89640021 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043546 NA +3012 chr4 + 190214555 89639967 89639966 89640013 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368285 NA +3013 chr4 + 190214555 89639981 89639980 89640043 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043568 NA +3012 chr4 + 190214555 89639989 89639988 89640035 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368307 NA +3013 chr4 + 190214555 89640003 89640002 89640065 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043590 NA +3012 chr4 + 190214555 89640011 89640010 89640057 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368329 NA +3013 chr4 + 190214555 89640025 89640024 89640087 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043612 NA +3012 chr4 + 190214555 89640033 89640032 89640079 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368351 NA +3013 chr4 + 190214555 89640047 89640046 89640109 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043634 NA +3012 chr4 + 190214555 89640055 89640054 89640101 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368373 NA +3013 chr4 + 190214555 89640069 89640068 89640131 63 ATATACACACATATATACGTATATATACACACATATATACGTATATATACACACATATATACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x.::....:.x.:.......:....:...:.....:x.:......x:..::.:::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 82043656 NA +3012 chr4 + 190214555 89640077 89640076 89640123 47 ACATATATACGTATATATACACACATATATACGTATATATACACACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x:...:x....................:.....:.x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 44368395 NA +3123 chr4 + 190214555 89640091 89640090 89640189 99 ATATACACACATATATACGTATATATACACACATATATACGTATATATATATATACATATATATATATGTATTTTTTTTTTCGAGATGGAGT-CTCGCTC chr4 - 94230402 7596413 7596412 7596508 86633895 86633894 86633990 96 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCC----TGGAGTGCTAGCTC ...:.x.::....:.x.:.......:....:...:.....:x.:.....:x..::..:::.:::x:..x:x..x.:....:.----......-..x.... 82M4D6M1I7M 63/95 66.3% 96/94230402 0.0% 5/95 5.3% 82043678 NA +3186 chr4 + 190214555 89654527 89654526 89654584 58 ATTTCTCTCTCTTTCTTTCTTTCTTTCTTTTTCTCTTTCTTTCATTTCCACCAGAAAT chr4 - 94230402 18929911 18929910 18929968 75300435 75300434 75300492 58 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAAGT ............:...:.....:...:.....:.:..xx.::.....x:x:.....:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 70724616 NA +3238 chr4 + 190214555 89667123 89667122 89667183 61 AGAGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAA--------AAAAAAATATATATATATAT chr4 - 94230402 47152891 47152890 47152959 47077444 47077443 47077512 69 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATAT ....:...x.xx.x:...................xx.:...--------............:....... 41M8I20M 51/61 83.6% 69/94230402 0.0% 8/61 13.1% 42514232 NA +3017 chr4 + 190214555 89667153 89667152 89667191 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 20229414 NA +3317 chr4 + 190214555 89667170 89667169 89667246 77 ATATATATATATATATATATATATATATATATATATGCATGTGTGTGTTTATACATATGTGTGT--------ATATATGTGTTGT chr4 - 94230402 71630142 71630141 71630226 22600177 22600176 22600261 85 ATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTGCTGT ..::.....:.:.:.:.x.....:....x.x.:...........x..:x.:.:x..........--------..x.x....:... 64M8I13M 57/77 74.0% 85/94230402 0.0% 8/77 10.4% 18037028 NA +3188 chr4 + 190214555 89678080 89678079 89678132 53 AAAGTGTGTGTGTGTGTGTGTATGTGTGTGTGTTTATATATATATACACACAC chr4 - 94230402 25393256 25393255 25393308 68837095 68837094 68837147 53 AAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...:......::.....:.......:.x.....x..:.:.:.:.:..:..... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 64284824 NA +4156 chr4 + 190214555 89727994 89727993 89728076 83 CTGCAACCTCTGCCTCCTGGGTTCAAGTGACTCTCATGCCTCAGCCTCCCAAGTAGCTGGAACCATAGGCGTGTACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.............x:..x..x.x........::..............:.:.--....:.....::.. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 71530868 NA +3076 chr4 + 190214555 89739979 89739978 89740026 48 ATGTTTATATATATAAATGTGTGTATATATATGTATATACATATATAT chr4 - 94230402 43600823 43600822 43600870 50629533 50629532 50629580 48 ATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT ......:.:...x..x...........:....x......x:....... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 46139156 NA +3101 chr4 + 190214555 89802577 89802576 89802749 173 CCGCATCTGTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTT----CTTTCTTTCCTTCTTTCTTTCTCT--------------CTTTCT---------CTTTCTTTCTTTTCTTCTTTCTTTCTTTCCTTTCTTTCTTTTATTTCTTCTG--TTCTTTCTTTCTTTTCTTTC chr4 - 94230402 19053890 19053889 19054090 75176313 75176312 75176513 201 CCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTC-TTCTATTTGCCCTTCCTTCTTTGTTTTTCAGATGACATCCATCTTCATATCCTTTC ..x::..:x..x..xx......:x..:..:.:......xx.....x:...:.:....:.:.:.:....:..----..:.x..:x..xx..x...x:...--------------x.x...---------.x..x...::..x....-....x.:.x:....:...::..x.x....xxx..--x..:x....:x.x.:..... 71M4I24M14I6M9I17M1D34M2I20M 113/172 65.7% 201/94230402 0.0% 30/172 17.4% 70748687 NA +3157 chr4 + 190214555 89802596 89802595 89802690 95 CTTTCTTTCTTTCTTTCTT-TCTTTTTCTTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTC--CTTCT-------TTCTTTCTCTCTTTCTCTTTCTTTCTTTT chr4 - 94230402 78374923 78374922 78375027 15855376 15855375 15855480 105 CCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCT .::.:....x.......:.-..:.....:.::..::.:.......:....xx......::.:--...x.-------..::..x..:x:......:.....x:.:. 19M1I42M2I5M7I29M 66/95 69.5% 105/94230402 0.0% 10/95 10.5% 11427673 NA +4128 chr4 + 190214555 89802597 89802596 89802758 162 TTTCTTTCTTTCTTTCTTTCTTTTTCT--TTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTT--TTCTTCTTTCTTTCTTTCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTCTTTTT chr4 - 94230402 45185594 45185593 45185751 49044652 49044651 49044809 158 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTC-TTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTC-------TTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ....::....:..xx::.:xx......--...x........:.::..:::...:.:x.:..:...........xx...-...:......:x...--.x.....:x..x::.x..-------.:.:.x.::x.::..:x...:.:x.........:.:.xx::.... 27M2I49M1D15M2I18M7D45M 101/154 65.6% 158/94230402 0.0% 12/154 7.8% 44617003 NA +3647 chr4 + 190214555 89802602 89802601 89802753 152 TTCTTTCTTTCTTTCTTTTTC-TTTCTTTCTTTCTCTCTTTCTGTTTCTTTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTTT-----------------------------CCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTC chr4 - 94230402 19053884 19053883 19054063 75176340 75176339 75176519 180 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTC--TTGCTTCTTCTATTTGCCCTTCCTTCTTTGTTTTTC ...:...:..x.::..:x..x-......:x..:....:.....xxx.:...x:.....:....:...:.....x::..x.x..:.x..:x..xx..x...x:.:.-----------------------------.x..x:....--..::.......:..:x::...:...:.:.x.:.... 21M1I83M29I10M2D36M 99/150 66.0% 180/94230402 0.0% 32/150 21.3% 70748718 NA +3088 chr4 + 190214555 89802616 89802615 89802762 147 CTTTTTCTTTCTTTCTTTCT---CTCTTTC-TGTTTCT-------TTCTTTCCTTCTTTCTTTCTCTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTTTCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTT chr4 - 94230402 79478349 79478348 79478506 14751897 14751896 14752054 158 CTTTTTTTTTAACCATCTCTAAGCTCTTTGGTGTTGCTATTGCAATGTTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTT ......:...xx::x.:...---......x-....x..-------.x:..:....:...x.:..:..:xx.:.:x:....x......x...::.:......::xx..:.:...:.x:....x.:x..x.x.:..x:...:x:x::.:..:x::.:... 20M3I7M1I7M7I113M 90/147 61.2% 158/94230402 0.0% 11/147 7.5% 10324267 NA +3330 chr4 + 190214555 89802645 89802644 89802716 72 TTTCTTTCTTTCCTTCTTTCTTTCT-CTCTTTCTCTTTCTTTCTTTTCTTCTTTCTTTCTTTCCTTTCTTTCT chr4 - 94230402 22629305 22629304 22629377 71601026 71601025 71601098 73 TTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT ...........:...::x.x..:x.-:..x........:x...x...x......x:...:.....:....:.. 25M1I47M 54/72 75.0% 73/94230402 0.0% 1/72 1.4% 67173340 NA +3412 chr4 + 190214555 89802654 89802653 89802775 122 TTCCTTCTTTCTTTCTCTCTTTCTCTTTCT--TTCTTTTCTTCTTTCTTTCTTTCCTTTCTTTCTTTTATTTCTTCTGTTCTTTCTTTCTTTTCTTTCTTTCTTTTTTTTTTT------TTGTATTTTTA chr4 - 94230402 45185583 45185582 45185712 49044691 49044690 49044820 130 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTA ..x:.x..:x:....:.....:..xx.:::--..:.:.x....x..........:.....x..:..:xx:..::.::x......xx:....::......:x...xx.x:..:.------....x...:.. 30M2I81M6I11M 79/122 64.8% 130/94230402 0.0% 8/122 6.6% 44617071 NA +4015 chr4 + 190214555 89821220 89821219 89821406 187 AGGAAGGAAGGAAGCAAGAAAGAAAAAAGAGAAAGAAAGAAAGGGAGGAAGGAAGGGAGGGAGAGAGGGAGG--AAGGAAGGAAGG------GAGAAAGGAAGGAA--GGAAGGG----------AAAAGAAAGAAAGGAAAGAGAGAAAGAAGGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAGGAAAAAAAGTAGGGAGA chr4 - 94230402 56098330 56098329 56098528 38131875 38131874 38132073 199 AAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCA--------AGAGGGGGGAAAAAAGTCAAGAGA .:.x..x...:x..::....:.:.x::...x..x:..:..:.x.x:x..xx.x.x:x..:...:x::..x..--..:....:....------...xx:....::.:--.....:.----------..x....:...x:..:..xx.:....x.....::...:....:.....x.--------.:..::..:........x::.... 72M2I12M6I14M2I7M10I50M8D24M 116/179 64.8% 199/94230402 0.0% 28/179 15.6% 33722890 NA +3193 chr4 + 190214555 89828943 89828942 89828989 47 AAAAAAACAAACAGACAAACAAACAAACAAACAAAAAACACATTTTA chr4 - 94230402 65284354 65284353 65284400 28946003 28946002 28946049 47 AAAAAAAAAAAAAGCCTAACAAACAAACAAACAAAAAACCCATCTTA .......x...x..x.x......................x...:... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 24544589 NA +3515 chr4 + 190214555 89845992 89845991 89846084 93 TATACACACATGAGATATCTGATGCCTTCCGTGTGTGTGT----GTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGAGAGAAAGAGA chr4 - 94230402 33398781 33398780 33398873 60831530 60831529 60831622 93 TATACACACATGCG----CACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ............x.----.xx.x:..x.x::x:...:.x.----.....:......:....:.:.......x.x.............x...:.x... 14M4D22M4I53M 67/89 75.3% 93/94230402 0.0% 8/89 9.0% 56447211 NA +3185 chr4 + 190214555 89846009 89846008 89846070 62 TCTGATGCCTTCCGTGTGTGTGTGTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGA chr4 - 94230402 50558497 50558496 50558558 43671845 43671844 43671906 62 TTTGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAA .:..x.x:...:x...::.....x..........:..:.:....:..:..x...x.....:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 39287512 NA +3784 chr4 + 190214555 89846028 89846027 89846107 80 GTGTGTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGATCATAGC chr4 - 94230402 33398821 33398820 33398900 60831503 60831502 60831582 80 GTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaactgttgaatcatagc .....:........:..:.:.......:.:.............x.....x.:.x.x:x.x:.::.xx.xx::........ 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 56447207 NA +3833 chr4 + 190214555 89846030 89846029 89846082 53 GTGTGTGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGAGAGAAAGA chr4 - 94230402 33398821 33398820 33398873 60831530 60831529 60831582 53 GTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:...........:.:.......:.x.............x.....x... 53M 46/53 86.8% 53/94230402 0.0% 0/53 0.0% 56447209 NA +3121 chr4 + 190214555 89872282 89872281 89872364 83 TGACTAGTTATCTTCATTTAATATTTTTTTATTGTTGCTTCTTCTCTTTCCCTTCTATATCCCTTTTTTATTAAACATCTCTT chr4 - 94230402 45339346 45339345 45339428 48890975 48890974 48891057 83 TGAGTTGTTTTCTTTATTTTATTCTTATTTTTTATTTCTTTTCTTGTTTGACTTCTAGATCTCTCATGAATTGAGCATCTTTT ...x.x...x....:....x..x:..x...x..:..x...:.::.x...xx......x...:..:x.xx...:.:.....:.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 44532936 NA +3012 chr4 + 190214555 89885106 89885105 89885181 76 TACATACATTTCCTTCCCTCCCTCCCTCCCTTCCTCCCTTCCTTCCTTCTTTTTTCCTTTCTCTCTTTCTCTTTTC chr4 - 94230402 9693760 9693759 9693832 84536571 84536570 84536643 73 TACATG-ACTTCTTCCTCTCCCTT--TCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCC .....:-.:...:.:.:......:--......::.:.:.:x......x:....x.:x...:.:......:....:. 6M1D17M2D50M 52/73 71.2% 73/94230402 0.0% 3/73 4.1% 80191346 NA +3034 chr4 + 190214555 89922180 89922179 89922251 72 CTGCAACCTCCGCCTCCCGGGTTCAATAGACTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:........xx.x:..x.xx.x........::.............:....x.::. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 71725054 NA +3005 chr4 + 190214555 89971599 89971598 89971663 65 CTCCTCTTCCTCTTCCTTCTCCTTTTCCTCTCCTCCTTCTCCTCCATCTTTTCCTCTTCCTCCTT chr4 - 94230402 70202202 70202201 70202266 24028137 24028136 24028201 65 CTCTGCTTCTTCTCTCTTCTCTCTTCTCCCCCCTCCCCCCCTTCCCAATTTTCCTTTTCTCACTT ...:x....:...::......::..::.:.:.....::.:.:...xxx.......:...::x... 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% 19769397 NA +3049 chr4 + 190214555 89983619 89983618 89983689 71 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAAGCTGGG chr4 - 94230402 50291208 50291207 50291278 43939125 43939124 43939195 71 AAACAGAAGTAAATAAACACACTTTGTATTTCCATATGTGCATATATACATATGTATATATACAAGGTAGG ...x.:..:x...x...x.x.x.x.:...x.x:....:.::.......:....:........:...x.:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 39692411 NA +3017 chr4 + 190214555 89983623 89983622 89983661 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 20545884 NA +3138 chr4 + 190214555 89999543 89999542 89999602 60 GGAAACACACACACACACACACACACACACACACACACACACACAAAGACGAAACAAAAA chr4 - 94230402 56248435 56248434 56248494 37981909 37981908 37981968 60 GAAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGA .:..:..x.x...x...............:.....x...xxx.....:..xx......:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 33751108 NA +3030 chr4 + 190214555 90014239 90014238 90014303 65 TGATAAATATTTAATTCTAAAATGATACTCAAAGTATTGTATATTTATCATACTTCATGTATTTT chr4 - 94230402 42233125 42233124 42233189 51997214 51997213 51997278 65 TAATTCATTTTTGATTATAAAATTATACTCAAGCAAATGTTTATTTAACAAATTCCATGTATTTT .:..xx..x...:...x......x........:xx.x...x......x..x.:.:.......... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 47781114 NA +3032 chr4 + 190214555 90113741 90113740 90113825 85 AAATATACGTGTGTGTGTGTGTGTATATATATATGTATATGTATATATATATATACGTATATATATGTATATATATATACGTATA chr4 - 94230402 81401289 81401288 81401373 12829030 12829029 12829114 85 AAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ...x...:x.x.....x.....x..x.x......::...x.x:..:..:..x:.::..:.:....x:.:.x:....:x.:...:. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 8712452 NA +3231 chr4 + 190214555 90113831 90113830 90113939 109 ATGTATATATATATATACGTATATATATATATATACGTATATATATATGTATATATATATACGTATATATATATATATATATATGTATATAT---ATATACACACACATACA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:.......:..::.:.:.:.x:x.:.....:..:x:x:.x..:.:..:...xx.x.:..x..x.....:.:....x.:.x.....---.:.x....xx.....:. 92M3I17M 70/109 64.2% 112/94230402 0.0% 3/109 2.8% 85696488 NA +3287 chr4 + 190214555 90113854 90113853 90113925 72 TATATATATATACGTATATATATATGTATATATATATACGTATATATATATATATATATATGTATATATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x.....x.::..:..:........:...:::..:..:xx.....x.:x.....:...:.x...... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 37632618 NA +3076 chr4 + 190214555 90113869 90113868 90113937 69 ATATATATATGTATATATATATACGTATATATATATATATATATATGTATATATATATACACACACATA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ..:.:.:.....:.::...x.:.:....x..:....:...::x..::.xx...:.:.:.........:. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 81718081 NA +3774 chr4 + 190214555 90217272 90217271 90217354 83 CTGCAGCCTCCACCTCCGGGGTTCAAGTGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.....:xx.x..:.x...........x...x.xx.x........::::...........:....x....--:....::.. 72M2D9M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 72020146 NA +3260 chr4 + 190214555 90243041 90243040 90243085 45 CTCTCTCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTAAAA chr4 - 94230402 81156781 81156780 81156825 13073578 13073577 13073622 45 CTCTTCTTTTTCTCTCTCTCTCTCAGTTTTTTTTTTTTTTTAAAA ....:::................:xx................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 9086260 NA +3044 chr4 + 190214555 90243049 90243048 90243089 41 TTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTAAAATAGG chr4 - 94230402 70081460 70081459 70081500 24148903 24148902 24148943 41 TTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAG ...:.:.........:.............::........:. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 20161589 NA +3689 chr4 + 190214555 90243139 90243138 90243221 83 CTGCAGCTTCAAACTCCTGGGCTGAAGTAATCCTTCTGCCTCAGCCTCCCAAGCAGCTAGGACTACAAGTGCACATCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC--CACTGTG ..:....::x..:..:.....:.x....:x.:.x:xx.x........::....:....:.:......x......--....:.. 74M2D7M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 72046013 NA +3075 chr4 + 190214555 90271821 90271820 90271890 70 ACAATTTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681933 56681932 56682001 37548402 37548401 37548470 69 ATAATTTTT-CATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTT .:.....x.-:......x:.:....x:.:...:....:..x:.......x...x...x....x....... 9M1D60M 52/69 75.4% 69/94230402 0.0% 1/69 1.4% 33589888 NA +3091 chr4 + 190214555 90271824 90271823 90271877 54 ATTTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..x..x..........:...::.:.:.:...:.....xx.:............. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 81589894 NA +3159 chr4 + 190214555 90271826 90271825 90271882 57 TTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735347 92735346 92735403 1495000 1494999 1495056 57 TTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::....x.....:...:..:.:..........x.x..:.x.........:.x... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% -2463521 -91766881 +3297 chr4 + 190214555 90271827 90271826 90271879 53 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681931 8681930 8681983 85548420 85548419 85548472 53 TATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ....x..........:...::.:.:.:...:.....x:.:............. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 81589896 NA +3282 chr4 + 190214555 90271829 90271828 90271884 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -2463519 -91766883 +3645 chr4 + 190214555 90271831 90271830 90271893 63 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA chr4 - 94230402 92735348 92735347 92735410 1494993 1494992 1495055 63 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAA .::....x.....:...:..:.:...............:.x.........:.x...:::.:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% -2463517 -91766885 +3282 chr4 + 190214555 90271833 90271832 90271888 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% -2463515 -91766887 +3068 chr4 + 190214555 90271835 90271834 90271890 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% -2463513 -91766889 +3121 chr4 + 190214555 90271835 90271834 90271888 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 86071561 NA +3045 chr4 + 190214555 90271854 90271853 90271914 61 ATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGGAGGTTTAATTGACTCACA chr4 - 94230402 44066634 44066633 44066694 50163709 50163708 50163769 61 ATGTGTGCTCCTTTTTTTTTTTTCTTTATTTTTTTTAACAAGGAGGTGCAAGTTACTCATA ..:.:.::x::............:...x........x.x........x:..x.x.....:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 46205220 NA +3139 chr4 + 190214555 90272979 90272978 90273032 54 GGTGACAGAGTGAGACTCTATCTCAAAAAAACAAACAAACAAACAAAAAAAAAC chr4 - 94230402 51829416 51829415 51829465 42400938 42400937 42400987 50 GGGGATAAAGT----CTCATTCTTAAAAAAACAAACAAACAAACAAAAAAAAAC ..x..:.:...----...xx...:.............................. 11M4D39M 44/50 88.0% 50/94230402 0.0% 4/50 8.0% 38443563 NA +3175 chr4 + 190214555 90272987 90272986 90273033 47 AGTGAGACTC---TATCTCAAAAAAACAAACAAACAAACAAAAAAAAACA chr4 - 94230402 88365946 88365945 88365995 5864408 5864407 5864457 50 AGGGAGACTTAAATACTTTAAAAAAACAAACAAACAAACAAAAAAAAACA ..x......:---..::.:............................... 10M3I37M 42/47 89.4% 50/94230402 0.0% 3/47 6.4% 1907041 NA +3322 chr4 + 190214555 90273002 90273001 90273048 47 CAAAAAAACAAACAAACAAACAAAAAAAAACAGAACTATGATATCCT chr4 - 94230402 4299075 4299074 4299121 89931282 89931281 89931328 47 CAACAAAACAAACAAACAAACAAAAAAAAACCCCACAATGATATCCT ...x...........................xxx..x.......... 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 85973927 NA +3067 chr4 + 190214555 90276271 90276270 90276335 65 CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 68014329 68014328 68014392 26216011 26216010 26216074 64 CTGCCTTCTCCCCTCCCCACCTTCTTTT-TCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATT ..x.....:::...:..:x.....:..:-.:..:...::x...................x:.x.. 28M1D36M 47/64 73.4% 64/94230402 0.0% 1/64 1.6% 22261942 NA +3321 chr4 + 190214555 90359841 90359840 90359922 82 ATATATATGTGTGTATATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATGTATATAA chr4 - 94230402 81401293 81401292 81401374 12829029 12829028 12829110 82 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAA ....x.x.....x.:.:.x..x:x:......:..:x.x...:..:..x.............x..:.x:....:x:.:..:.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 8958548 NA +3351 chr4 + 190214555 90359886 90359885 90359958 73 TATGTGTGTGTGTATATATATATATATATGTATATAATTTTTTT-TTTTTTTGAGACGGAGTCTCACACTGTTG chr4 - 94230402 19559296 19559295 19559367 74671036 74671035 74671107 72 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtggtggg--ttcacactggtg .:...........:...............::.xx........x.-.x..:...x.::..:--:........x.. 44M1I15M2D12M 56/71 78.9% 72/94230402 0.0% 3/71 4.2% 70800590 NA +3726 chr4 + 190214555 90369255 90369254 90369376 122 ATGAGGAGGAAGAAAGAAGA-AGAAGAAAGAAAGGAGGAGGAAAAGAAGAAGGACAAAGATGAGGATGAGGAGGAAGAAAGAAGAAGAAGAAAGAAAAGAGGAG-----GAAAAGGAAAAGAAGGAAG chr4 - 94230402 30533166 30533165 30533286 63697117 63697116 63697237 121 ATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAA-------GACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..:.::............:.-..::..:......:xx.x.:.....x.:.:.xx...-------..::.:..xx:.:.x.......x:..:..:.......:.:-----.:......:.:...x:... 20M1I36M7D40M5I19M 79/115 68.7% 121/94230402 0.0% 13/115 11.3% 59836089 NA +3091 chr4 + 190214555 90369266 90369265 90369354 89 GAAAGAAGAAGAAGAAAGAAAGGAGGAGGAAAAGAAGAAGGACAAAGATGAGGATGAGGAGGAAGAAAGAAGAAGAAGAAAGAAAAGAG chr4 - 94230402 64493007 64493006 64493095 29737308 29737307 29737396 89 GGGAAAAAAAAAAGAAAATAAGGAGGAGGAAAGTAAAAATAAGTTAGGAGGGGATGAGAAGGTGACAGAACTAGAAAGATAGTAGAAAG .::.:..:..:......:x.............:x..:..x:.xxx..:x.:.......:...x::x.::.xx.::....x..x.:.:.. 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 25876259 NA +3160 chr4 + 190214555 90391456 90391455 90391499 44 ATATATATATATATATATATATATATATATACACACACACAGTG chr4 - 94230402 45271688 45271687 45271731 48958672 48958671 48958715 44 ATATCTATATATACACACATATATATGTATACAAACACACAGTG ....x........:.:.:........:......x.......... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 45119768 NA +3179 chr4 + 190214555 90413933 90413932 90413997 65 AGCGAGACACCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAAAAATATATATATATATAT chr4 - 94230402 47152891 47152890 47152959 47077444 47077443 47077512 69 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATAT ..x.:.....xx.x:...................xx.:..----...:x.....x......:....... 40M4I25M 52/65 80.0% 69/94230402 0.0% 4/65 6.2% 43261042 NA +3017 chr4 + 190214555 90413965 90413964 90414003 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 20976226 NA +3362 chr4 + 190214555 90432569 90432568 90432644 76 TCCTTCTTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCTCTTTCTTTAT---------TTTCTTTTCTTCTGTTTGGAGACT chr4 - 94230402 36600615 36600614 36600699 57629704 57629703 57629788 85 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGGTATTAATTTGCTCTCTGGTGCTTGAACACT .....:............:..:.......::.:::....x:.::..:.....---------...x:.:...xx..:...:.x... 52M9I24M 55/76 72.4% 85/94230402 0.0% 9/76 11.8% 53831954 NA +3023 chr4 + 190214555 90437227 90437226 90437270 44 AAACACACACGCACACATGCACACATACGCACACATGCACACAT chr4 - 94230402 18600389 18600388 18600432 75629971 75629970 75630014 44 AAGCACGCAGACACACATTCAGACATATGCACACATGCACACAT ..:...:..x:.......x..x.....:................ 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 71836838 NA +3051 chr4 + 190214555 90437231 90437230 90437281 51 ACACACGCACACATGCACACATACGCACACATGCACACATGCGCGCGCACA chr4 - 94230402 90815422 90815421 90815472 3414931 3414930 3414981 51 ACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA .........xx::...........:x..............:x..:.:.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% -378191 -93852211 +3168 chr4 + 190214555 90439272 90439271 90439333 62 AGCAAGATTCCTTCTCCAAAAGGAAAACAAAACAAAACAAAAACAAACAAACAAAAAAAACC chr4 - 94230402 33572378 33572377 33572432 60657971 60657970 60658025 55 AACAAAATTATTTTT-------GAAAACAAAACAAAACAAAAACAAAAAACCAAAAAAACCC .:...:...x:..:.-------.........................x..x........x.. 15M7D40M 47/55 85.5% 55/94230402 0.0% 7/55 12.7% 56866894 NA +3321 chr4 + 190214555 90439286 90439285 90439337 52 TCCAAAAGGAAAACAAAA---CAAAACAAAAACAAACAAACAAAAAAAACCAGCC chr4 - 94230402 4159742 4159741 4159796 90070607 90070606 90070661 55 TCTACAGGAAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAAACCCAACC ..:.x.:.:.........---...........:...............x...:.. 18M3I34M 45/52 86.5% 55/94230402 0.0% 3/52 5.8% 86279544 NA +3183 chr4 + 190214555 90439294 90439293 90439348 55 GAAAACAAAACAAAACAAAAACAAACAAACAAAAAAAACCAGCCTTAGTAGTAAA chr4 - 94230402 8984532 8984531 8984585 85245818 85245817 85245871 54 GAAAACGAA-CAATACCAAAACAAACAAACAAAAAAAACCCACCACAGTTGTAAA ......:..-...x..x.......................x:..x:...x..... 9M1D45M 46/54 85.2% 54/94230402 0.0% 1/54 1.9% 81454762 NA +3707 chr4 + 190214555 90496944 90496943 90497036 93 CTCCAGCC-TGGCGATAGAGCGAGACTACAAAAAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAATAAAGGAAAT--AATAGTCATCAAATACATA chr4 - 94230402 29092632 29092631 29092727 65137676 65137675 65137771 96 CTTCAGTCATGGGGAAAGAGCAAGAATCCAAAAAAAAAAAAAAGGTAGAAAAACAGGGAAAGGGTCAAAGTAACttaaataataattaaaaatata ..:...:.-...x..x.....:...x.x...............::x.:...:.x..:.....::x:....x..x.--....:.x..:...x.:... 8M1I66M2I19M 68/93 73.1% 96/94230402 0.0% 3/93 3.2% 61404312 NA +3018 chr4 + 190214555 90496968 90496967 90497011 44 CTACAAAAAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAATAAA chr4 - 94230402 76845955 76845954 76845998 17384405 17384404 17384448 44 CTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAA ....................:.:.:...:.....:.xx...... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 13651013 NA +3161 chr4 + 190214555 90548728 90548727 90548809 82 ATATATATATATATATATATATACACACACACACAGACATATATACACACACATACACACACATACTAGCATATTCTTTATC chr4 - 94230402 7596413 7596412 7596488 86633915 86633914 86633990 76 ATACAGATGCATACAAATGTATATACACACGCA------TGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTC ...:.x..::...:.x..:....:......:..------.:......x...:....x:..:..::.xx..x:.......:.. 33M6D43M 54/76 71.1% 76/94230402 0.0% 6/76 7.9% 82952315 NA +3168 chr4 + 190214555 90551664 90551663 90551712 49 ATTAAAAAATATAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATA chr4 - 94230402 24141276 24141275 24141324 70089079 70089078 70089127 49 ACTAAAAAATATATTAATATCTCTCTCTCTCTGTCTCTCTCTATATATA .:...........x.xx.x.............x.........x...... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 66410388 NA +3095 chr4 + 190214555 90579955 90579954 90580021 67 AGCAAAATCCATACTTAATAGTAAGTGAAAATAAAAAAGGAGAAAAAAGAAAAAGGCCACATCTTAG chr4 - 94230402 21004549 21004548 21004614 73225789 73225788 73225854 66 AGTAAAATC-ATTTTTTGTTGTTGTTGAAAATAAAAAGGCAGAAAAGAAAAAAATGCCACATTTCAG ..:......-..x:..x:.x..x:x............:.x......:.:.....x.......:.:.. 9M1D57M 50/66 75.8% 66/94230402 0.0% 1/66 1.5% 69575406 NA +3167 chr4 + 190214555 90616719 90616718 90616770 52 ACACACACACACACACACACAAATAAAATAAAATAAAAGGGAGAGAGAGAAA chr4 - 94230402 9599022 9599021 9599073 84631330 84631329 84631381 52 ATACACACACACACACACAAAATTAAAATAAAACAAAAAAGACAAAGTGCAA .:.................x..x..........:....::..x.:..x.x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 81017697 NA +3158 chr4 + 190214555 90645082 90645081 90645137 56 AAAAAAAAAAAAAAAGAAAAAAAGACACGATCTCATTCTTTTGCGGCATAGTATTC chr4 - 94230402 21223517 21223516 21223572 73006831 73006830 73006886 56 AAAAAAAAAAAAAACGAAAAAAAAACACTTCTCTATCCTGTTACAGCATAGTTTTC ..............x........:....xx::::..:..x..:.:.......x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 69421565 NA +3158 chr4 + 190214555 90645082 90645081 90645137 56 AAAAAAAAAAAAAAAGAAAAAAAGACACGATCTCATTCTTTTGCGGCATAGTATTC chr4 - 94230402 21219543 21219542 21219598 73010805 73010804 73010860 56 AAAAAAAAAAAAAACGAAAAAAAAACACTTCTCTATCCTGTTACAGCATAGTTTTC ..............x........:....xx::::..:..x..:.:.......x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 69425539 NA +3025 chr4 + 190214555 90648237 90648236 90648300 64 AGAGGAATAAAGGAAAAAAAGAAGAAAGAAAGAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAA chr4 - 94230402 42895014 42895013 42895077 51335326 51335325 51335389 64 AGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAA .......x:...........:.::...:.x.:.......:x:....xx.x:.....xx.:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 47753223 NA +3300 chr4 + 190214555 90659427 90659426 90659495 69 TTTAATGAGAAATAAATGTAAAGAGCAGATTAGTCATCCCCCCAAAATTGTATTATTATTTTTTCATCA chr4 - 94230402 66683729 66683728 66683797 27546606 27546605 27546674 69 TTCAAGAGGAAATACACACAGAGAGAAAAGTAATTCTTCCTCCAAAACTGTATTATCATTTTTTAACCA ..:..x::......x.:::.:....x.:.x..:.:x.:..:......:........:.......x.:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 23975698 NA +3502 chr4 + 190214555 90675640 90675639 90675765 126 TTTATCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACAT chr4 - 94230402 82822545 82822544 82822662 11407741 11407740 11407858 118 TTTCCTTCCTTATTCTTGTTTTGCTTTTGGGGTTTGGG--GCTGTTTTTTGTTTGTTTTGTTTTGTTTGTTTGTTTTTCACTCTTTGATTTTTTTATGCT------CTCTCAACTTTATGAGGCAT ...x::.::..x..:..x....x:....xx..:.....--.x..x.....x...x....x....:.x.....x.....:x:.:...xx.......x.x:.------....x.::....x.:x:... 38M2D60M6D20M 81/118 68.6% 118/94230402 0.0% 8/118 6.8% 7853095 NA +3235 chr4 + 190214555 90675677 90675676 90675733 57 GTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37691313 37691312 37691369 56539034 56539033 56539090 57 GTTTGTGGGTGTTTTTTTTTTGTTTTGGGGTGTTTTTTTTTTTTTTTTTGCGTTCTT ...x....x.x..........x....x:x....................x:x..:.. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 52984364 NA +3061 chr4 + 190214555 90675678 90675677 90675740 63 TTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 31411665 31411664 31411727 62818676 62818675 62818738 63 TTGGTGGTTTGTCATTTGGTTTTTGTGTGTGTTTTTTTTTTCCCCTTTAGTTTTATTTTGTCA ..........x.:x...xx.....x.:..............::::...xx....x....x.:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 59264013 NA +3072 chr4 + 190214555 90693865 90693864 90693921 57 AAAGAAGAAAGAGAGAAAGAAAGAAGAAAGAGAAAGAAAGAAGAAAGAGGAGGAGAG chr4 - 94230402 81167076 81167075 81167132 13063271 13063270 13063327 57 AAAGAGGAGAGGAACAGGAAAAGAAAAAAAAAAAAGAAAGAGGAACAGGGAGCAGAG .....:..:..::.x.:::......:...:.:.........:...x::....x.... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 9526789 NA +3204 chr4 + 190214555 90717635 90717634 90717751 117 CAGGCCTCTTGG------CTTCTTGCCTTTTGCAGGTATAACTAGTGAAGGACACACATTAGACACTGAAAATCTACCCACTAATATGTATGTGTGTTTATATATATATATACACATATATAT chr4 - 94230402 56650784 56650783 56650883 37579520 37579519 37579619 100 CAGGCCTCCTGAAGTGATCATCTTGCTTTATAAAGGTTTAA---------GACTAACATT--------------TGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ........:..:------.x......:..x.:x....x...---------...xx.....--------------.:.x..x:x.....::....::........:...:.:............ 12M6I23M9D10M14D49M 72/94 76.6% 100/94230402 0.0% 29/94 30.9% 34066851 NA +3114 chr4 + 190214555 90771547 90771546 90771655 109 TTAGAAAATGCCGGGCACTAAAAAAAAAAAAAAAAAGAAAAGAAAAAAATGCATATTTTTGTAGAAAGTGAGATACTATTTTTATTACAAAC----AACTTTAAAATATTTTA chr4 - 94230402 79585480 79585479 79585592 14644811 14644810 14644923 113 TCAGATAAAGTTGGAAAATAAACAAAAAAAAAAAAAGGAAGAAAACAAATGCCTATTGAGGTGTTCTGTCAGATGTTTTTTGAAGTACAAGTTAGAAAATTGAACTTATTCTA .:...x..x.::..:x.x....x..............:..::...x......x....xxx..:xxxx..x....::.x...xx.x.....::----..x..x..xx....:.. 92M4I17M 73/109 67.0% 113/94230402 0.0% 4/109 3.7% 11186067 NA +3077 chr4 + 190214555 90811925 90811924 90811998 74 ACACACACACATATATACACTTAATAAACTCACATATATATACACATATATATATATATATATATAAACACATA chr4 - 94230402 7995787 7995786 7995860 86234543 86234542 86234616 74 ACACACACACATACACACACATTATACATTTAGCTACAGATAAAGCTGTATCTACAGCTATATATAGATATATA .............:.:....x.x...x.:.:.xx..:.x...x.xx.:...x..:.xx........:.:.:... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 82816138 NA +3130 chr4 + 190214555 90844191 90844190 90844242 52 ATAGATTGAGAATATATATATATATGTATAGAGAGAGAGAGAAAGAGAGGAA chr4 - 94230402 68616301 68616300 68616352 25614051 25614050 25614102 52 ACAGGTTGGGAAAAAATATATATATATAGAGAGAGAGAGATGAAAAAAGGAA .:..:...:...x.x..........:..x...........x:..:.:..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 22227890 NA +3033 chr4 + 190214555 90879521 90879520 90879616 96 AGAGGAAGAGGAAGAAGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGG chr4 - 94230402 23858007 23858006 23858102 70372301 70372300 70372396 96 AGGAGAAGTATCAGAAGGAGCAAGACAAACTGAAGGAGGAATGGGAAAAGGCACAGAGAGAAGTTGAAGAGGAGGAGCGTAGATACTATGAGGAGG ..::....x:xx.....:..x....x:..xx::....:...x::...:...x.x.:::.....xx..:.........x:x::.x.xx.x....... 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 67021514 NA +3349 chr4 + 190214555 90879542 90879541 90879623 82 AAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx....:.......x...:............:x:..xx.....::x..x.. 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 31557394 NA +3033 chr4 + 190214555 90879554 90879553 90879627 74 AGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAG chr4 - 94230402 59322148 59322147 59322221 34908182 34908181 34908255 74 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAG .:..:.....x..x..x...x.x.xx.:x..xx.:.....:....x......:........::x...xx..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 31557406 NA +3524 chr4 + 190214555 90879562 90879561 90879646 85 GAAGAAGAGG----AAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAAGAAGAAAGAAGAAAG chr4 - 94230402 40465775 40465774 40465863 53764540 53764539 53764628 89 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAG .:.....:.:----.....x:....:...x:...:..x.:.:....:x:.:x.x.....::.:.:.:........:...::.:.:.... 10M4I75M 57/85 67.1% 89/94230402 0.0% 4/85 4.7% 50413787 NA +3304 chr4 + 190214555 90879618 90879617 90879692 75 GGAGGAGGAGGAA----AGAAGAAAGAAGAAAGAGGAAGAAGAAGAGGAAAGAAGAAGAAGAAAGAAGAAGAAGAGGAA chr4 - 94230402 472365 472364 472443 93757960 93757959 93758038 79 GAAAGAGAAGAAATTGCAAAAGGAGGAAGACAGAGGAATAAAGAAACGAAAGATGAAAAAGACAGCAAGGGAAGATGAA .:.:...:..:..----.:...:.:.....x.......x..::.:.x......x...:....x..x.:::.....x... 13M4I62M 54/75 72.0% 79/94230402 0.0% 4/75 5.3% 90407253 NA +3568 chr4 + 190214555 90879640 90879639 90879751 112 AAGAAAGAGGAAGAAGAAGAGGAAAGAAGAAGAAGAAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAAGAAGAAAGAAGAACTCTTATTGGAGA------ACTGGTGCAGTTGTTTG chr4 - 94230402 2046802 2046801 2046919 92183484 92183483 92183601 118 AAGGCTGAGGAAGCAGAGCGAGAAGAACGGAGAAAACTTGAGTCAAAGAGAGAGGAGGAAAGGAGGAAAGAAGAGGAAAGAATCCGCCTTGAGGAGGAACGACAGGTGGGATTGGTTG ...:xx.......x...:x::...::.x.:....:.xxx:..xx:.....::..:..:.:....:.........:::.....::.x:x...::..------..x....x::...x... 95M6I17M 71/112 63.4% 118/94230402 0.0% 6/112 5.4% 88832838 NA +3136 chr4 + 190214555 90887881 90887880 90887927 47 AAAAAAACAAAACAAAACAACAACAACAAAAACACAATAATTAGAAA chr4 - 94230402 70931662 70931661 70931708 23298695 23298694 23298741 47 AAGAGAACAAAACAAAACAACAACAACAAAAACTAAAAAAGTAAAAA ..:.:............................xx..x..x..:... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 19956219 NA +3071 chr4 + 190214555 90924700 90924699 90924759 60 TAAAAACTTGGTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTATTTGAGATGGAGTCTCAC chr4 - 94230402 24092419 24092418 24092478 70137925 70137924 70137984 60 TGGACATTAGGTTCTTTTTTGTTGCTGTTTGTTTGTTTGTTTTTTAAAGTGAACACTTAC .::.x.:.x....:...x......:................x...:.::..:.xx..:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 66832281 NA +3625 chr4 + 190214555 90932828 90932827 90932942 115 CAAAAAAAAAAAAAAAAAGAAACAATGTTGTTCCGTCTCAAGAAAGGAAGGAAGGAAAGAAAGAAGGAAGGAGAAAGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 65242470 65242469 65242584 28987819 28987818 28987933 115 CAAAAAAAAAAAAAGAAAGATGTGCTAATACTCAAGTCAAGAGGATAAAGGAAGGTAAGAAAGTGAGATGAAGTGAGAAAGAGAAAAAATAAAACAGGTAAGTTAAAAAGGTAGG ..............:.....x:::x.:x.::..x:x::x.::::.x:........x.......x::..x.:..x:....:......:..x:...x.::x..:xx..:..:.x.:. 115M 70/115 60.9% 115/94230402 0.0% 0/115 0.0% 25690358 NA +3150 chr4 + 190214555 90932878 90932877 90933007 130 GAAGGAAAGAAAGAAGGAAGGAGAAAGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 39529274 39529273 39529403 54701000 54700999 54701129 130 GAAAGGAAGGAAGATGGAAAGGGGAAGGACTAGGAGGTTACGCTGATAGTGGAAAGGTAGGCAAGAGAATGTGGAAGAGTGCTGGTGTAGAGGTATGGAAGAATGAGACAGGTAGAAACAAAGCAAAAAA ...:.:...:....x....:.:.:...:.xx..:.:.xx.x:xx..x..x:::..:.x.:.x....:.:x:x.:....:x.xx:.x:x::.:.x.x.:.....x....x..:x.....x....x..:... 130M 76/130 58.5% 130/94230402 0.0% 0/130 0.0% 51403604 NA +3024 chr4 + 190214555 90932900 90932899 90932984 85 GAAAGAAGGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:.:.x:.xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 54074607 NA +3065 chr4 + 190214555 90932908 90932907 90932988 81 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAG-AAGGAGGACAGGGACAAGAAAAGAAAAAG ......x.:xx..x.....x...::...:.........:.x..-----....::..-...:.:..x..::.x..::.....:.... 43M5I8M1D29M 58/80 72.5% 85/94230402 0.0% 6/80 7.5% 54074615 NA +3044 chr4 + 190214555 90932910 90932909 90933005 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x.:::...:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 29598209 NA +3046 chr4 + 190214555 90932917 90932916 90933000 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x.::..:.:.:.... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 54074623 NA +3064 chr4 + 190214555 90932930 90932929 90933025 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x.::...x.x...:.:x:.x.:::...:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 29598229 NA +3139 chr4 + 190214555 90932931 90932930 90933041 111 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 28816810 28816809 28816920 65413483 65413482 65413593 111 AAGGCTAGATAAATGGTAGGAAAAAAAGAATGAAAAGCTGACAGAGATAAAAAGAAAGAAAAGAACACATGGAGCTGTTATGAAGCCATGAAAGAAAGAAATCAAAGCAGA ..:.xx...x.:.x:.x.:....:......x....::xx..x...:.x...:.........::..x.x.x::..xx:xx.x...:xx.x............xx..::x... 111M 70/111 63.1% 111/94230402 0.0% 0/111 0.0% 62116121 NA +3492 chr4 + 190214555 90933005 90933004 90933098 94 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAACGAAGGAAAGAAGAAAAGAAAGAAAGAAAAGAAAAGAAAGAA chr4 - 94230402 45355412 45355411 45355505 48874898 48874897 48874991 94 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGA .::......:.x.x.:.x.xx.::.:.x.......:x............x..:::.x:..::....x...x.:..:.x.....:...:x..::. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 45577593 NA +3223 chr4 + 190214555 90933006 90933005 90933122 117 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA--GAGAAGGAAGGAACGAAGGAAAGAAGAAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAACAATGTTGTTCCAAAAATG chr4 - 94230402 44053989 44053988 44054098 50176305 50176304 50176414 110 AAGAATGGAGGA--GAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAG-AACAATG------CAAAAGTG .....x.:.:..--........::...:.::x......--.:.:...x:..xx:x:.:.......::..::x..:..x...x.x...::.x......-.......------.....:.. 12M2D24M2I57M1D7M6D8M 76/108 70.4% 110/94230402 0.0% 11/108 10.2% 46879017 NA +3570 chr4 + 190214555 90943703 90943702 90943762 60 CAAACATGAGCCACTGTGCCAGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAG chr4 - 94230402 25079581 25079580 25079640 69150763 69150762 69150822 60 CAAATATGATTCATTTTGTCAGACTATTTGTTTATTTGTTCTTTTTTTTTTTTTTTGGAG ....:....x:..:.x..:...:...x..x...x...x..:................... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 65864122 NA +3040 chr4 + 190214555 91013924 91013923 91013990 67 TTTTTTGTTTTTGTTTTTGTTGTTGTTGTTGTTG-TTTTGTATTTCTGAAAAAAATGCCAAGGGATTT chr4 - 94230402 20565645 20565644 20565711 73664692 73664691 73664758 67 TTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTTTTATAATT-TGACAGAGACCCCAAGAGTTTT ......x.....x.............:......x-....:..x..-...x.:.:.:x.....:.x... 34M1I10M1D22M 53/66 80.3% 67/94230402 0.0% 2/66 3.0% 70448279 NA +3091 chr4 + 190214555 91039628 91039627 91039690 63 TGTATGTGTGTTTATATACATACATACACATATATATTTATAATGAGTATATGTATGTATAGA chr4 - 94230402 61428356 61428355 61428414 32801989 32801988 32802047 59 TGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATG----TATCAATGGATAGA ..........:x..........:.......:...xx...x.....----...xx...x..... 45M4D14M 49/59 83.1% 59/94230402 0.0% 4/59 6.8% 29611272 NA +3201 chr4 + 190214555 91046673 91046672 91046722 50 AGAGGATAATATGTTTTTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTTT chr4 - 94230402 32236552 32236551 32236601 61993802 61993801 61993851 50 AAAGGGGAAAATGCTTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTT .:...:x..x...:.....x...................:..:..x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 58810121 NA +3534 chr4 + 190214555 91046686 91046685 91046738 53 TTTTTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGGG--AGCTTTTTTTTTA chr4 - 94230402 59743390 59743389 59743444 34486959 34486958 34487013 55 TTTTTTGCTGTTGTTGTTGCTGCTGTTGCTTTGTTTTGGGGAAGTTTATTTTTCA .......:...........:..:.....:...........--..:..x.....:. 40M2I13M 46/53 86.8% 55/94230402 0.0% 2/53 3.8% 31303296 NA +3312 chr4 + 190214555 91059356 91059355 91059486 131 TGTGTATGTGTGTGTGTGCGCATGCACACCTGTGTTGGTTATTTTGTGGTTTGTTTTTGTTGTATTAATAAAAGATTTTATTTGTATGCTTTATTAAGGTTATATATATATATATATATAAGTCTCCAAAA chr4 - 94230402 15882773 15882772 15882888 78347515 78347514 78347630 116 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTG-TTTTGTTGTTTT---------TCATGGTTTTTTCTTTTGTTAAAAGAAAACACATCTAT---TATAAG--TCCAAAA ..x..:...........::::..::::.x:..........x....x.x.....-.........x..---------.:x.:x..x.x.x:...:....::xx.x.:.:..x...---......--....... 53M1D12M9D38M3D6M2D7M 83/116 71.6% 116/94230402 0.0% 15/116 12.9% 75176583 NA +3132 chr4 + 190214555 91133239 91133238 91133289 51 CTTTCTTTTGCTTTTTCTTGTTTTCTTTCCTTTTTCTTTCATTCCTTTGAA chr4 - 94230402 4677059 4677058 4677109 89553294 89553293 89553344 51 CCTTCTTTTAATTTTTCTTGTTTTCTTTTGTTTTTCATTCATTTTTTGAAA .:.......:x.................:x......x......::..x:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 86456180 NA +3247 chr4 + 190214555 91241930 91241929 91241998 69 TTTGTTTCTGCATATATTACACACACAACTGTGTGCGTATATATATATATTTATGTGCATATATATGTA chr4 - 94230402 72916819 72916818 72916887 21313516 21313515 21313584 69 TTCTTTGCTGTATGTATCATACATACCACATTTTGTGTATATATATCCAGTCATGTACACATATATATA ..:x..x...:..:...:.:...:..x..xx.x..:..........x:.x.:....:..:......:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 18325111 NA +3055 chr4 + 190214555 91271648 91271647 91271694 47 TATACATATATACACACATATATATATGATATATATACACACACATA chr4 - 94230402 42571773 42571772 42571819 51658584 51658583 51658630 47 TGTGCAGACATACACACATGTATACATGGTATACACACACACACACA .:.:..x.:..........:....:...:....:.:.........:. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 48699875 NA +3022 chr4 + 190214555 91275258 91275257 91275349 92 TATAAGAGTTCCCTTTTCTTTGCATCCTTGCCAGCATCTGTTTTTTTTTGTTTGTTTTTGTTTTTTGTTTTTGTTTTTGTTTTTGTCTTTTT chr4 - 94230402 51198242 51198241 51198333 43032070 43032069 43032161 92 TAGAAAAGTTTCCCTTTCTTTTCATCATTGCCCTTATTTGCTTTTGCAGCATTTTTCTACTGTTTCCTGGTTGCTCTCGCTTTTTTTTTTTT ..x..:....:..:.......x....x.....xx:..:..:....x:xxxx..x..:.xx.x...:x.xx...:.:.:.:....x.:..... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 40077016 NA +3047 chr4 + 190214555 91275261 91275260 91275316 56 AAGAGTTCCCTTTTCTTTGCATCCTTGCCAGCATCTGTTTTTTTTTGTTTGTTTTT chr4 - 94230402 76858883 76858882 76858938 17371465 17371464 17371520 56 AAGAGTTTATTTTTCTTTGCTTCATTGCCAACTTCTCTGTTTGCTTTTTTGTTTTT .......:x:..........x..x......:.x...x.x...x:..x......... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 14416378 NA +3386 chr4 + 190214555 91275281 91275280 91275355 75 ATCCTTGCCAGCATCTGTTTTTTTTTGTTTGTTTTTGTTTTTTGTTTTTGTTTTTGTTTTTGTCTTTTTAATAAT chr4 - 94230402 20565614 20565613 20565688 73664715 73664714 73664789 75 ATCATTGTTTAAATTCATTTATCTTTGTGGGTTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTTTTATAAT ...x...::x:x..:::...x.:.....xx......x......x........x....:x....:.:...x..... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 70709667 NA +3125 chr4 + 190214555 91275289 91275288 91275332 44 CAGCATCTGTTTTTTTTTGTTTGTTTTTGTTTTTTGTTTTTGTT chr4 - 94230402 56492887 56492886 56492930 37737473 37737472 37737516 44 CAGCATTTGAGTTTTTTTGTTTGTTTTTGTTTTTTGTTTGTTTT ......:..xx............................x.x.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 34782402 NA +3061 chr4 + 190214555 91288135 91288134 91288200 66 TATATATACACTCGTATATATATATATACATACACACACACATATACACATACATACACATATGTA chr4 - 94230402 48167038 48167037 48167103 46063300 46063299 46063365 66 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTA .:......:xx:.:.....:......x.......::x...::.::x..:.:....::...:..... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 43121097 NA +3536 chr4 + 190214555 91315117 91315116 91315184 68 TGAGGGCTACTTCTAGATAGAACCGTGTGTGCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGT chr4 - 94230402 36532037 36532036 36532104 57698299 57698298 57698366 68 TGGGGGCTGTTCGTAGTGAGAAGGGTATATGCAACTCTGTGTGTATGTGTGTGTGTGCATATGCAAGT ..:.....::.:x...xx....xx..:.:.....x.x.......:............::.:..:.... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 54783080 NA +4073 chr4 + 190214555 91352322 91352321 91352404 83 CTACAACCTCCACCTCCTAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx.x..:..:........::x...x.xx.x........::..................--....::....::.. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 73155196 NA +3449 chr4 + 190214555 91366094 91366093 91366170 77 CTGCAACCTCCGCCTCCCAGGTTCAAGTGAGTCTCCTGACTCAGCTTCCTGAGTAGCTGGGATTACAGGCGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.::..........xx..x.xx.:......:.::::.........:.:....x.:....... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 73168968 NA +3144 chr4 + 190214555 91385891 91385890 91386015 125 TTCGGATACATATGTGTATGTTTGTTTTTACATACATATAAATATACGTGTATATCCATGTGTATTTATACATACACACACACACATACATATATATGTATAT---------------GTACACTCA---CACACACAAATGC chr4 - 94230402 73121114 73121113 73121256 21109147 21109146 21109289 143 TTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACACCGATGC ...:x.:......::::.x:xx::.xxx.......:....::..:...x......x::x..::..x..x.:.::.x....x.x...:....:....x.:.x..---------------:...:....---..:....x:.... 103M15I9M3I13M 80/125 64.0% 143/94230402 0.0% 18/125 14.4% 18264777 NA +3270 chr4 + 190214555 91431223 91431222 91431274 52 GAGACTCCATCTCAAAAACAGCAACAACAACAACAACAAAAACAAACATAAA chr4 - 94230402 90456297 90456296 90456348 3774055 3774054 3774106 52 GATGTTCCATTTAAAAAACTACAACAACAACAACAACAAAAAAAAGCACAAA ..x::.....:.x......x:.....................x..:..:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 974926 NA +3183 chr4 + 190214555 91434962 91434961 91435033 72 ATGGCCGTAGAGTTCTGTTGTTGTTGTTGTTGTTTGTTTGTTTTGTCTATGTTC------CATGATGTTTAATGAATT chr4 - 94230402 14248568 14248567 14248645 79981758 79981757 79981835 78 ATGGCTTTTGGGTTTGGTCGTTTTTGTTGTTGTTTGTTTGTTTTCTCAATTTCCAAACATCTTTATGCTGAATGGATT .....:x.x.:...:x..:...x.....................x..x..x.:.------.x.x...:.x....:... 54M6I18M 55/72 76.4% 78/94230402 0.0% 6/72 8.3% 77186394 NA +3362 chr4 + 190214555 91443612 91443611 91443698 87 ACCTTCACATTGTGCACGTGTACCCTAAAACTTAAAGTATAATAATAATAAAATAATAATAAAATAAAAGAAAATAA--TATTAGCGAT chr4 - 94230402 9789354 9789353 9789442 84440961 84440960 84441049 89 ACCTCCCCAGCAGGCACCTGTGCTCACAAACCCAGAGCAAAATGGCAATAAAATAGAAATAAAATAAGGAAAAACGAATTATTAGGAAT ....:.x..x::x....x...:.:.xx....::.:..:.x...:::.........:x..........:::....::.--......x:.. 77M2I10M 59/87 67.8% 89/94230402 0.0% 2/87 2.3% 81654258 NA +3304 chr4 + 190214555 91474710 91474709 91474834 125 TGGCTAAATTTAGGCACACATGTATACATACATGCACACACACACACACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 89016075 89016074 89016199 5214204 5214203 5214328 125 TGGCAGGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ....x::..x.:x:....:x..:..:..:...::.::x::.:..........::x:..:...:.::..x..:.x....:.x.:.:x.::::.:.:.::x..:::::.x..::x:.....x::... 125M 67/125 53.6% 125/94230402 0.0% 0/125 0.0% 2458635 NA +4020 chr4 + 190214555 91474715 91474714 91474836 122 AAATTTAGGCACACATGTATACATACATGCACACACACACACACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 4417341 4417340 4417457 89812946 89812945 89813062 117 AGATTTAG----ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAAC .:......----....:......:...::....x:x...:..:....x.x..x.::.:..:...xx.xx::.x..x.....:.:....x...x.....:.-....x....xx...:.:.x.. 8M4D88M1D21M 81/117 69.2% 117/94230402 0.0% 5/117 4.3% 87057374 NA +3572 chr4 + 190214555 91474719 91474718 91474852 134 TTAGGCACACATGTATACATACATG-------CACACACACACACACATGTGT-----------------GTGTATATATATATATAT-TTGTGTATATATATATAT--------------ATATATATATATACACACACACACACACACACACACACATTGCCTTCCAAAT chr4 - 94230402 14964724 14964723 14964896 79265507 79265506 79265679 173 TTACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAAT ...xx..:.x.......x.....x.-------...x:...x.x.::...x...-----------------...:..x......x.x:.-.....x.:.:.x....:.--------------:.:...:........xx........::............:..::xx.::... 25M7I21M17I18M1I18M14I52M 97/134 72.4% 173/94230402 0.0% 39/134 29.1% 76509995 NA +3327 chr4 + 190214555 91474727 91474726 91474838 112 ACATGTATACATACATGCACACACACACACACATGTGTGTGTATATA-------------TATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964761 14964760 14964884 79265519 79265518 79265642 124 ACAGAAATGCATTTGTACACTCAAAAAGGCAAA-GTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x:x..:...x::.:...x..x.x.x:..x.-...::.x......-------------:.:.x....x.x..::.:.::.:.::.:...:......:.xx........::............. 33M1D13M13I65M 74/111 66.7% 124/94230402 0.0% 14/111 12.6% 76509966 NA +3761 chr4 + 190214555 91474728 91474727 91474846 119 CATGTATACATACATGCACACACACACACACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACA----CACATTGCCTT chr4 - 94230402 73121100 73121099 73121222 21109181 21109180 21109303 123 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTT .:...::.:::.:..x..:.....:.:.....x:x.::..x:..:...::....xx.:::::x:.....:.:x:..:.....x....:.x....x.x.......:::.----..x...x.... 108M4I11M 74/119 62.2% 123/94230402 0.0% 4/119 3.4% 18353628 NA +3707 chr4 + 190214555 91474733 91474732 91474842 110 ATACATACATGCACACACACACACACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACATTG chr4 - 94230402 4417351 4417350 4417459 89812944 89812943 89813052 109 ATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAACTG ...:.....::........x:x...:.:.::..x.x:.x.::.:..:....x:x.:..x..x.....:.:....x...x..:.::.-....x....xx...:.:.x.:.. 86M1D23M 71/109 65.1% 109/94230402 0.0% 1/109 0.9% 87057382 NA +3827 chr4 + 190214555 91474748 91474747 91474836 89 CACACACACACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964797 14964796 14964884 79265519 79265518 79265606 88 CATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:x:.:.:.x.x....-...:x.:.:.x....:....:..:.::.:.::.:...:......:.xx........::............. 17M1D71M 61/88 69.3% 88/94230402 0.0% 1/88 1.1% 76509951 NA +3590 chr4 + 190214555 91474756 91474755 91474831 76 CACATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..::.....:...:.::...x.:..:.x.x.::....:...::x..:..xx...:.:.............x..... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 83078969 NA +3974 chr4 + 190214555 91474758 91474757 91474833 76 CATGTGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .........:.:.:.::...x.:..x.:.x..:....:...::x..:..xx...:...............x..... 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 83078971 NA +3256 chr4 + 190214555 91474762 91474761 91474832 71 TGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....x::.:.x....:.x.::x....:.:.::.:...:......:.xx:.:.....::............. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 76509948 NA +4027 chr4 + 190214555 91474762 91474761 91474835 74 TGTGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .........:.:.::...x.:x...:.x..:....:...::x..:..xx...................x..... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 83078973 NA +3842 chr4 + 190214555 91474764 91474763 91474840 77 TGTGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACACACACAT chr4 - 94230402 8395789 8395788 8395865 85834538 85834537 85834614 77 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .....:...:.:.::...xx::.....x..:....:...::x..:..xx.:.................x.....x.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 83078975 NA +3318 chr4 + 190214555 91474766 91474765 91474834 69 TGTATATATATATATATTTGTGTATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964816 14964815 14964884 79265519 79265518 79265587 69 TGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:.:.x....:.x.x:....::.:.::.:...:......:.xx:.......::............. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 76509950 NA +3505 chr4 + 190214555 91474773 91474772 91474839 67 ATATATATATTTGTGTATATATATATATATATATATATATAC--------ACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...x....:...x.:..:...x..:....:...:.--------.:.................x..... 42M8I25M 53/67 79.1% 75/94230402 0.0% 8/67 11.9% 83078985 NA +3021 chr4 + 190214555 91474778 91474777 91474828 51 TATATTTGTGTATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..x.:x.x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 3327598 NA +3106 chr4 + 190214555 91484049 91484048 91484110 62 ATTCTCTAAAAAAAAAAAAAAAAAGCAAAGCAAAACAAAAAATAGTATACATGATTCAGTTC chr4 - 94230402 79171636 79171635 79171697 15058706 15058705 15058767 62 ATTCTTTAGGAAAAAAAAAAAAGAACAAAACACAACAAAACATGAAAAGAAAAATCCAGTTC .....:..::............:.:....:..x.......x..::x.x:x.x:..:...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 12312413 NA +3093 chr4 + 190214555 91530637 91530636 91530713 77 TTTATGCTGAAAAAAAAATTCTGTTATAAAGAATTGTATTTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGAGTTTT chr4 - 94230402 9000365 9000364 9000439 85229964 85229963 85230038 75 TTTATGCAGAATAAATAAATTACTTATACAGATTTATATTTTTC--TCTATTTTTTTTTTCCTGAAAGTAGAGCCTT .......x...x...x..x.:xx.....x...x..:........--...x..........::.x:.:::....::.. 44M2D31M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 82530272 NA +3276 chr4 + 190214555 91565016 91565015 91565087 72 GCACCTTGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGAA chr4 - 94230402 48089484 48089483 48089555 46140848 46140847 46140919 72 GCACCTTGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAA .........x..x...:x..x...:.:.::::........:....x.x........:.:.:.:.x.::::.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 43475532 NA +3164 chr4 + 190214555 91594230 91594229 91594332 103 TAATATGGAAATTATTTTCCTCTGGGCCAAGGCAACCAAAT-CCATATAT-ATA----TATATGTGTGTATATATGTATATGTATATGTGTATATATACATATATGTAC chr4 - 94230402 68967362 68967361 68967466 25262937 25262936 25263041 105 TAATATGGCA--TATTCTACTCCCTTCTA--GTAATAAAATACCATATTTGATAGTACTATTTCTGACTATATATGTGTAAGTATATGTGTAAATATACATATATTTAC ........x.--....:.x...:xxx.:.--.:..:x....-......x.-...----...x.x..xx.........:..x...........x............x... 10M2D17M2D10M1I8M1I3M4I51M 79/99 79.8% 105/94230402 0.0% 10/99 10.1% 22626868 NA +3012 chr4 + 190214555 91594281 91594280 91594363 83 ATATATGTGTGTATATATGTATATGTATATGTGTATATATACATATATGTACACACATATATATACATATATATACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:...:...:.::..:x.:......x.:::...:...:.x..:..xx.:.....:.:.:.:...:.x.:.:.x.::x... 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% 83198493 NA +3854 chr4 + 190214555 91594312 91594311 91594447 136 TGTATATATACATATA-TGTACACACATATATATACATATATATACACATATATATACACATATATATACACACATATATACATATATACACATATATACACATATATATACATATATACATATACACACATATATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCA--CAGAGACACACATGTATA ....:.:x:...x.x.-....xx.x.:.:.::..:.....x:...........:.:.x.x::..:x:....:..:....x::.:.::x::.:..:.:x::.......x....::x:.--..x.x........:.... 16M1I100M2D18M 84/134 62.7% 135/94230402 0.0% 3/134 2.2% 18473237 NA +3119 chr4 + 190214555 91594325 91594324 91594418 94 ATATGTACACACATATATATACATATATATACACATATATATACACATATATATACACACATATATACATATATACACATATATACACATATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCA--TATATTCAAATGTCCACATACATTCACACGTGT ...x.:.:....xx:.:..:....::.:.x::::::.x....:.....:...:.:.x..--.....x..x..:.x......:..x....::.:. 59M2D33M 59/92 64.1% 92/94230402 0.0% 2/92 2.2% 63650788 NA +3064 chr4 + 190214555 91594337 91594336 91594428 92 ATATATATACATATATATACACATATATATACACATATATATACACACATATATACATATATACACATATATACACATATATATACATATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x::.....:xx:.:.......::.:.x::::::.x....:....::...:.:.x:.....:x..x..:.x......:..x:...::.:. 92M 55/92 59.8% 92/94230402 0.0% 0/92 0.0% 63650800 NA +3066 chr4 + 190214555 91594353 91594352 91594413 61 ATACACATATATATACACATATATATACACACATATATACATATATACACATATATACACA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .....x..::...:.x.::......:....:...:......x.:...:..x..:::..:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 83997940 NA +3046 chr4 + 190214555 91594409 91594408 91594470 62 ACACATATATATACATATATACATATACACACATATATACATATATATACACACATATATAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC .:...x..::.....x..:..:...:....:...:......x.:......x:..::.:::.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 83997996 NA +3116 chr4 + 190214555 91614766 91614765 91614814 49 AGAGCAAAAAAAAAAAAAAAAAAAAATGGCAGAAAGCTTACTTAATGAA chr4 - 94230402 41794799 41794798 41794847 52435556 52435555 52435604 49 AGAGGAAAAAAAAAAAAAAAAAAGGAAGGCAAAAGGTCTATTTAGTGAA ....x..................::.x....:..:.::..:...:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 49819967 NA +3027 chr4 + 190214555 91652308 91652307 91652379 72 TATACATATTATATATATTGTATATATAATTGTATACATATATGTATATATAATTATGTATATACAAACACA chr4 - 94230402 11425919 11425918 11425990 82804413 82804412 82804484 72 TACACATATTGCATATATTGTATACATGCATGTAGACACACATATCCCTACAAATATATTTAAATAATGACA ..:.......::............:..:xx....x...:.:..:.x:x..:..x...:.x..x.:..xx... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 80226389 NA +4129 chr4 + 190214555 91673665 91673664 91673830 166 TTCCTCCTTTCCTCCTTTTTCTTATCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTT chr4 - 94230402 45185586 45185585 45185743 49044660 49044659 49044817 158 TTGCTCATTTTC-CCTCTTCCTAGTCTCAGT-TTTCTGCTTCATTCTTTCTTT---TCTTTCATTTTTCAC--CTTTCTTCTTTCTTTAACTCTTCC-CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x...x...:.-...:..:..x:....xx.-.....x::..x..........---......x..:..:.:--....:..........xx:....::-......:x...xx.x::.:..x:.x...x::..::.xx.:x::...xx...:.:x.......:..... 12M1D18M1D21M3D15M2D24M1D68M 107/158 67.7% 158/94230402 0.0% 8/158 5.1% 46488079 NA +4353 chr4 + 190214555 91673670 91673669 91673864 195 CCTTTCCTCCTTTTTCTTATCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCT-TTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTT-----CTTTCTCTTCTTTCT--TTCTTCTTTTCTTCTTTCT chr4 - 94230402 2456274 2456273 2456476 91773927 91773926 91774129 203 CCTCTACTCATTTTTCTTACTCTTAAAATGTATTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGTTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTCTTCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACTGTTCCTGTGCATTTTCTCTCAGCACCTTCCCGTCTTCATTATTCTTCCATTTTGCCTCCT ...:.x...x.........::::.xxxx.x:x..:..::.:...::::..x.x...::.....:.x..:.:.::..x......x:..x.::.:x.:.x..:::....::x...x..:x.xxx..-:...:....x.....x:.x..:..x.x:x......:.-----.:...:.x....:x.--......:x..:.x.:.:.. 124M1I37M5I15M2I19M 118/195 60.5% 203/94230402 0.0% 8/195 4.1% 89217396 NA +4287 chr4 + 190214555 91673690 91673689 91673867 178 CTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTC---TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTC chr4 - 94230402 59424941 59424940 59425121 34805282 34805281 34805462 181 CTGTTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTC ..x...:::...x:..::...::..x..:.:.....::..:xx:.:...xx...:.---.x.:..x...:..::..:x.:..x..::.x.x::....:....x.x....x.:x:::x.x..::x.:....x:x:......:.::...:...x......:::x:..::xx.:::.:..:... 56M3I122M 101/178 56.7% 181/94230402 0.0% 3/178 1.7% 32248749 NA +3356 chr4 + 190214555 91673696 91673695 91673837 142 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTT----CTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTC chr4 - 94230402 66196052 66196051 66196197 28034206 28034205 28034351 146 CTTTTTTTCTCCTTCTTTCTAATTTTCCCGGCTTCTCTAATTTTCTACTCTTCTCCACTGACTTGCCATCACACTCTCCTTTATGCCATTCCCTTTTCAGCTCCCCTTAAGCTTAGTGTTCTTCCTCAGTTTCTTCTTTCTTCATC ....:......:........xx:....::xx:....:..x..:.:.x:....:----..xx...x.:x.:x.x:...:::..x:x::x..:.....::xx..::.:..xxx:..xx.x.....:..:xx...:.........:x.. 53M4I89M 85/142 59.9% 146/94230402 0.0% 4/142 2.8% 25477644 NA +3606 chr4 + 190214555 91673712 91673711 91673806 95 TTCTTTCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTC chr4 - 94230402 35294589 35294588 35294683 58935720 58935719 58935814 95 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC ..:::.....:.::...x.x.........:..:....x:..::..x....:...:..:.::x.:....:..xx.:x..x.:..::.:..x..::. 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 56379123 NA +3877 chr4 + 190214555 91673717 91673716 91673849 133 TCTTTCTTTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCT---TTCTTTCTTTCCTTTCTTTCTTTCTTTC----CTTTTCCTTTTCTTTCT---TTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCT chr4 - 94230402 63216368 63216367 63216510 31013893 31013892 31014035 143 TCTTTCTCACTTGCCTTATTTTTCCTTCAGTCCTCTTCATTTTTTGCTTTGTTTTTGTATGATTTCTTTAACTTCCTCAGTTCCAACAAATCTTTCCTTTTGTCTACTCAATTATTTTTTCTATCTTTCTTTTTCTTCTTCCt .......:x...x.:......:.::..:xx.:..:.::x.:....x....x...:.---.xx.......xx:...:.:xx...:xx.----....:.:...x::.x..---..x........x.......:..::.....:.. 56M3I28M4I17M3I32M 90/133 67.7% 143/94230402 0.0% 10/133 7.5% 28457349 NA +3391 chr4 + 190214555 91673724 91673723 91673907 184 TTCTTTCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTTCTTCTTCTCTTTTTCTTCTTT chr4 - 94230402 63712530 63712529 63712713 30517690 30517689 30517873 184 TCTTTTCCTTACATCTGTGTTTTCTCAGTCTCTGTATTTTTCCCTGTATGTGCTAGAAGCTTTTCTTTCTCTTACAGCATTTATTTTTATTGTGTCATTTTCCCTCTGTTTCCCCTTTTCATTGGCCCTGTGTGACTGTTTGTTTAAACCGTTTGCCTGCTTTCATCTTCCATTTTTCTTCTCT .::....:...:x...x.x..:.:..xx...:.x.x...:.::..x.x.x.x:.xxxxx.:.........:.:x:xx.x...x:....x..x:x.:x....::..:.x....:.:.:..:x..xx::..x.x:xx..x.:.x.:.:xx::x:.:x.::x.....x.....:x..........:. 184M 103/184 56.0% 184/94230402 0.0% 0/184 0.0% 27961194 NA +3085 chr4 + 190214555 91673729 91673728 91673791 63 TCTTTATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTT chr4 - 94230402 88442035 88442034 88442097 5788306 5788305 5788368 63 TCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTT .....x.x......x...........x:....:..x:::..........xx.x.x....x... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 3231694 NA +3023 chr4 + 190214555 91673734 91673733 91673795 62 ATTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTT chr4 - 94230402 50985356 50985355 50985417 43244986 43244985 43245047 62 ATTTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTTCTCTTTATTCTTTTTTTCCCT ............:xx:..x::.......xx.......x.....:.:.x.:....:....::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 40688378 NA +3489 chr4 + 190214555 91673774 91673773 91673908 135 TCTTTCTTTCCTTTCTTTCTTTCTTTCCTTTTCCTTTTCTTTCTTTCTTT-----TTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCT--------------CTCTTTCTTCTTCTCTTTTTCTTCTTTT chr4 - 94230402 91731746 91731745 91731898 2498505 2498504 2498657 153 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATT-TCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTT .:.:..x..:......x::..x........::..:..:......::....-----.:....:.x..-...:..::...x::..xx:x:..x..x..::.:....:::x.x..--------------...:::x..x...:...:.:.x...:.. 50M5I11M1D45M14I28M 86/134 64.2% 153/94230402 0.0% 20/134 14.9% -57972 -94172430 +3567 chr4 + 190214555 91673782 91673781 91673898 117 TCCTTTCTTTCTTTCTT-----TCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTT--CTTCTTCTCTTT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:...:...x.x...-----.x..x.:...::.:..:....:....:...:x.::..:x.x:.::x....xx:.:.xxx::.:.x.....x...:...........x.--........:.:. 17M5I88M2I12M 77/117 65.8% 124/94230402 0.0% 7/117 6.0% 48591881 NA +4195 chr4 + 190214555 91673795 91673794 91673915 121 TCTTTCCTTTTCCTTTTCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTT--CTTTTCTTCTTTCTTTCTGTCTT-TCTCTCTCTCTTTCTTCTTCTCTTTTTCTTCTTTTTTGAGCA chr4 - 94230402 45185593 45185592 45185716 49044687 49044686 49044810 124 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCA .:..:...:.....xx...:xx...::.x:...x........:.......x..:..--.:..............xxx....-:..:....x...xx.x......x:.x::.x::...:.:.x.. 56M2I23M1I42M 84/121 69.4% 124/94230402 0.0% 3/121 2.5% 46488202 NA +3279 chr4 + 190214555 91673811 91673810 91673904 94 TCTTTCTTTCTTTTTTCTTTCTTTCTCTTCTTTCTTTCTTCTTTTCTTCTTTCTTTCTGTCTTTCTCTCTCTCTTTCTTCTTCTCTTTTTCTTC chr4 - 94230402 71741111 71741110 71741204 22489199 22489198 22489292 94 TTTCTCATTCTTGTTCTAATTATTTTCTACTTACATTTCACCTCTCTTCTTTCTTGCTGTCTTTATCCTTGCCTGGCTTTCCATCTGTTTCTCC .:.:..x.....x..::xx.:x..:...x...x.x..::x.:.:...........x........x..::.x:..xx...:::x...x.....:. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 19932700 NA +3036 chr4 + 190214555 91684054 91684053 91684106 53 TACAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAAGAAACAAACAAAAAA chr4 - 94230402 38550291 38550290 38550343 55680060 55680059 55680112 53 TGCAAAAAAAAAAAAAAAAAAGAGGGAATAGAAAAGTAGATGTGAATTAAAAA .:.....................::...x......:x...x:::..:x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 53133763 NA +3054 chr4 + 190214555 91733856 91733855 91733908 53 AAAAAAAAAAAAAAAAAAAAAAAAAGCATTCCTCATGTACAAAGAAGTTGCAA chr4 - 94230402 86644984 86644983 86645036 7585367 7585366 7585419 53 AAAAAGCAAAAAAAAAAAAAAAAAAGCATTTCTAATATTTACAAAAATCACAA .....:x.......................:..x..:.x:.x.:..:.::... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 5088872 NA +3103 chr4 + 190214555 91766275 91766274 91766345 71 TGTTCTCATATATATATATACACACATACATACACATACATATATA----TATGAATTTATAAGTCTAGGCATTT chr4 - 94230402 66904840 66904839 66904914 27325489 27325488 27325563 75 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTT ....:........:..::........:.:.:.....:......x..----:.x.x:.x..:..x:x..x...... 46M4I25M 52/71 73.2% 75/94230402 0.0% 4/71 5.6% 24861435 NA +3330 chr4 + 190214555 91813342 91813341 91813401 60 AAAAACAAACAAACAAACAAAAAGATAGTAAAACACCTACAAAAAGAACTCTGCCAAAAT chr4 - 94230402 1314065 1314064 1314124 92916279 92916278 92916338 60 AAACAAAAACAAACAAACAAAAAGAGAGTGAAAACACTAAAAAAAGAACACCACAAAAAT ...x.x...................x...:...xxx...x.........x.::.x..... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 90499277 NA +3004 chr4 + 190214555 91858302 91858301 91858336 35 ATATGTGTGTGTGTGTATATATATATGTATATGTT chr4 - 94230402 52579774 52579773 52579808 41650595 41650594 41650629 35 ATACGTGTGTGTGTGTATATATATATATATATGTT ...:......................:........ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 39278528 NA +4574 chr4 + 190214555 91867373 91867372 91867524 152 AGCTGGCTGTCATTTCCTAGCCTGTTGGCATTGATATTTTGGATTGGTTTGTACTTCAAATCACTTAGGCACTTAATAGCTTATAAATGTTTACACTGAGACCAAAATGTAGATGAAGACAATTTTTGAAGGAAAACATCAGTTTGTATGCT chr4 - 94230402 56837159 56837158 56837309 37393094 37393093 37393244 151 AGCTGGCCAAAGTATTATATCACACTGGCACAAATATACTACAAGTATTTATATTTCATGTCATGCAG-CACTTAATAGCCTGTTAATGTTAGTACTGGGATTTAGCTAGAACAGAAAAGGTTTTAGGAAGGAAAACATCATTTTGTATGCT .......::xx:.x.:x..x.x:::.....:x:....x:.:x.xxx:...:..:....x:...:x:..-...........:.:.x......x::....:..::x.:x.:x.:xx...:.x:x...xx..............x.......... 68M1D83M 96/151 63.6% 151/94230402 0.0% 1/151 0.7% 35030214 NA +3102 chr4 + 190214555 91889092 91889091 91889175 84 CATATACATATATATATACACACACACATGCACACACATATACATGTGCACATATATACACACACAAATATATATATTCTCATA chr4 - 94230402 73121110 73121109 73121193 21109210 21109209 21109293 84 CATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACA .....x....:.:.........x.x:....x::...:.::..:.x..:...:x:....::::x::.x.....x...:x.:..:. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 18767982 NA +3105 chr4 + 190214555 91889115 91889114 91889168 54 ACACATGCACACACATATACATGTGCACATATATACACACACAAATATATATAT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ...:x......xx:....:.:......:x........:.....x.:........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 35238285 NA +3029 chr4 + 190214555 91889135 91889134 91889180 46 ATGTGCACATATATACACACACAAATATATATATTCTCATATATAT chr4 - 94230402 71630136 71630135 71630181 22600222 22600221 22600267 46 ACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCAT .:.....:::...................:.....:.::...::.. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 20258999 NA +3578 chr4 + 190214555 91895231 91895230 91895343 113 AATGTATAACACATAATATATAAATATATTGTTATATATAATATACAATATATTATTATATAGTATATATAATATATTAATATAATATATTACATATA--------ATATATAGTTTATTA chr4 - 94230402 51771621 51771620 51771731 42458672 42458671 42458782 111 AATATATAGTA-ATTATATATGG---TATTCTTATATATAATATAGTATTTAGTATTATGTAGTATATTTGATATAATTGTA------ATTATATATAGAATGCTTGTATATAGTGCAGTA ...:....::.-..x......::---....x..............xx..x..x......:........x.:.....x.x:..------....:.....--------:........x:.x.. 11M1D11M3D56M6D10M8I15M 81/103 78.6% 111/94230402 0.0% 18/103 17.5% 40123610 NA +3077 chr4 + 190214555 91895333 91895332 91895383 51 ATAGTTTATTAAATGTGTGTGTGTGTGTGTATATATATATATATATAAAAT chr4 - 94230402 52579762 52579761 52579812 41650591 41650590 41650641 51 ATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAAT ...::.:..x.:..::............:...............:.xx... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 39315571 NA +3110 chr4 + 190214555 91931061 91931060 91931142 82 TTTGATCATTTCTTCCTTTTTTTTTCAATCTCTATTATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTT chr4 - 94230402 40193306 40193305 40193387 54037016 54037015 54037097 82 TTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGAAAATGGACTT ...x...x.....::..:.x.:...:.x..:::.x:x..:x.................:.....::.:::::.x.x:.x... 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 51737755 NA +3546 chr4 + 190214555 91955199 91955198 91955261 63 GTTTTCTTTTTCAAAATTGTTTGGGATTTTTGTTTGTTTGCTTTTTTCTTCTTTTTTTGCATA chr4 - 94230402 19657030 19657029 19657092 74573311 74573310 74573373 63 GTATGTTTATTCTACATTGTTAGGGATTTTTGTTTGTTTGTTTGTTTTCTTTTGTTTTGCATA ..x.x:..x...x.x......x..................:..x...::.:..x......... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% 72298169 NA +3036 chr4 + 190214555 91967121 91967120 91967179 59 ATGTACATATACACATACATATACGTGTGTGTGTATATATACATACATGTATATATGTA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ..:..:.x.:...x.....:....:....x:..:x.:....x.:.....:......:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 74446368 NA +3122 chr4 + 190214555 91967141 91967140 91967219 79 ATACGTGTGTGTGTATATATACATACATGTATATATGTATATATATACATGTGTGTATATATACACACACACGTATATG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..::....:.....::...x....::..x..:........::x..:.:xx:.::::.:.:.:.......x..::.x... 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% 83571353 NA +3286 chr4 + 190214555 91967145 91967144 91967207 63 GTGTGTGTGTATATATACATACATGTATATATGTATATATATACATGTGTGTATATATACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....:....:.:.:....:....::..:..::..x.:xx..x.......:.::......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 44871981 NA +3464 chr4 + 190214555 91967165 91967164 91967296 132 ACATGTATATATGTA-TATATATACATGTGTG--TATATATACACACACACGTATATGTGTGTGTGTGTGTATATATATATATATACATATATAT---ATATATATATATATATCCTAGTTAGTATATACACATATGT chr4 - 94230402 40224621 40224620 40224757 54005646 54005645 54005782 137 ACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATA-ATTTGTTGATTCTGCATTCATTACACACATAAGT .........x.xx..-..:x.......:...:--.x.x.:.:..xxx:x..:x..x.x...............:........x........:.:.---.....-..x.:.xx..:..:xx.xxxx..:.......x.. 15M1I16M2I61M3I5M1D34M 93/131 71.0% 137/94230402 0.0% 7/131 5.3% 51742544 NA +3242 chr4 + 190214555 91984227 91984226 91984435 209 TAAAAAAAAAAAAAAAAAAAAAAAATGCTAAGAGAGTAGATTTTAAGTGTTCTCAGAACAAAAATGATA----------ATTCTGT-----GAGGTATAA---TGCATATGTTAATTA-----------------GCCCAATTTAGCCATTCCACAACAT--ACATGTATTTCAAAACATCATGTTGCACTTGATAAATATATGCAA---TTTTGTCAATTAAAAAATGATTTAAAAAATGTGAAAAAA chr4 - 94230402 24408079 24408078 24408325 69822078 69822077 69822324 247 TGAAAAAAAAAAAAAAAAAAGAGAATGTTAATAAAATATATCTGAAAAATTCAAAGGATACAAGTGAGATTACAGTATTTTTCTGTCTACAGAAGTGCAATTTTGTTTTTGTTTACTCACACAAGAGACATTAATGCCAAATTT--CCTTTGTGTTGCATCCACATTCAGTTCATAAGCCTTCATAGAACTTACTAAATATATATCAATTTTTTGTTTAGTTATGAATGAAATTGAAAGTGCAGAACAA .:..................:.:....:...x.:.:..x..:.x..:x:...xx..:.:.x..:...x.----------x......-----..:..::..---..:x.x....x.:.x-----------------...x.....--..x..x:::x:...--....x:.x....x..xx::x::.x.x....:x.........::x.---......:x.x.x.x:.....xx.x:...:..:::..x.. 69M10I7M5I9M3I15M17I9M2D14M2I45M3I39M 136/207 65.7% 247/94230402 0.0% 42/207 20.3% 67576148 NA +3682 chr4 + 190214555 91999476 91999475 91999609 134 ATATATACAGTATTATATATACATATATAGTGTTTTTTATATATACTGTTATACTATTATACATATATATATGCTGTTACACTATTATATGGTTTAGACAATTAGGTAATATCTATTAATACTCAGCAATGTAT chr4 - 94230402 7120118 7120117 7120244 87110159 87110158 87110285 127 ACATGAAAAAAATAGTATATACTCACATACTATTTTTTGTATATACTCATATACTATTTCATACACTCATATACTATTTCACTAACA-------TGAAAAAAAAAATAGTATATACTCATATAAAATAGTATAT .:..:x.x.:x..x:.......x:.:...x.:......:........xx.........x:.:.:.:x:....:..:..x.....x:.-------.::.x..xx.::..:...x..:.x...:xx.::.:.:... 87M7D40M 81/127 63.8% 127/94230402 0.0% 7/127 5.5% 84879358 NA +4640 chr4 + 190214555 92006470 92006469 92006649 180 GCATTTTAATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTTCTTTTTTTTCTCTCTCTCTCTTTCTTTCTTTTATTTTT chr4 - 94230402 45185567 45185566 45185743 49044660 49044659 49044836 177 GCATAGGGATTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGC--TTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ....xxx:..:.x.x:..x..x..:x:....::....:..xx::.:xx..:.:.x:...x................x..:..:x:.....-...:...:..xx:..:.:....:..:x...xx.x.--.:..:x..x...x.....:.xx:.x.:.::xx...:.:x.......x.:... 90M1D35M2D52M 111/177 62.7% 177/94230402 0.0% 3/177 1.7% 46820903 NA +3435 chr4 + 190214555 92006514 92006513 92006653 140 TTCTTTCTTTCTTT---CTTTCTTTCTTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTTCTTTTTTTTCTCTCTCTCTCTTTCTTTCTTTTATTTTTTCTT chr4 - 94230402 34857649 34857648 34857791 59372612 59372611 59372754 143 TTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTT ..:..:..:.:x..---:..x.::.:.x..x......:..x..x:.x.:..:.:..:x..x...x.::::..x:.x.:x.:..:....::x.:x..:.......::::::::x:.:.:...x..x..x:.x........:... 14M3I126M 81/140 57.9% 143/94230402 0.0% 3/140 2.1% 57148865 NA +3169 chr4 + 190214555 92009255 92009254 92009338 84 TATTTAATAAACTCTCCTATATATGTA-------TATGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATATATACATAT chr4 - 94230402 70982591 70982590 70982681 23247722 23247721 23247812 91 TATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .....x...x.:x:x::...x:.....-------.x:x...........:.....:..:......x:...x....:.::::...:...:.. 27M7I57M 58/84 69.0% 91/94230402 0.0% 7/84 8.3% 21026664 NA +3283 chr4 + 190214555 92009284 92009283 92009336 53 TGTGTGTGTGTGTGTGTGTATATATATGTGTATATATGTATACATATATACAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:....:.x::..x..:...:.:....:.:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 21026655 NA +3108 chr4 + 190214555 92009294 92009293 92009360 67 TGTGTGTGTATATATATGTGTATATATGTATACATATATACATATATACACACATATACATACATGT chr4 - 94230402 32959568 32959567 32959634 61270769 61270768 61270835 67 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .....::x....:..:x....x.:.:.:::.:.:................x.:....x...:xx... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 59049726 NA +3270 chr4 + 190214555 92009308 92009307 92009395 88 TATGTGTATATATGTATACATATATACATATATACACACATATACATACATGTATGTATACATATATA---------TCATGTAAGTTAACACTTAA chr4 - 94230402 17853465 17853464 17853561 76376842 76376841 76376938 97 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATGACAGTTCACACTGAA ...x...x......:.:.:..:......:.x:..xx:x::...:...........x.x.:.....:..---------x....xx....x.....x.. 68M9I20M 63/88 71.6% 97/94230402 0.0% 9/88 10.2% 74155843 NA +3078 chr4 + 190214555 92011140 92011139 92011200 61 AAAATTTTCTATAATTTCTTAATTTTCACCAATTTAATTATGTTATAGGTAATTTTTTATT chr4 - 94230402 20006564 20006563 20006624 74223779 74223778 74223839 61 AAATTTTTCAATGTTTTCTTAATTTTCATCAATTAGAAGGTGTAATAAGTATTTTTTTTTT ...x.....x..:x..............:.....x:.xx:...x...:...x......x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 72004576 NA +3149 chr4 + 190214555 92044734 92044733 92044818 85 TGTCTTTTCCTCTTTTTCTCTCTCTCTTTTTCCTTGACTCCCTCTTTGTCTTTCTGTCTCTTCCTTTCTGTCTCTTCCTCTCTCT chr4 - 94230402 8141236 8141235 8141320 86089083 86089082 86089167 85 TGCCCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ..:.::....x.:...x..x.........:.:x..x.:....:..x.x.:...:.x.:.:....:.x.xx.:.:.:...::::.. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 83903498 NA +3812 chr4 + 190214555 92044737 92044736 92044842 106 CTTTTCCTCTTTTTCTCTCTCTCTTTTTCCTTGACTCCCTCTTTGTCTTTCTGTCTCTTCCTTTCTGTCTCTTCCTCTCTCTCTCTTTGCCTCTTTTCCTCTCTGT chr4 - 94230402 43081925 43081924 43082026 51148377 51148376 51148478 102 CTGTCCCTCCTTTTCCTTTT----TTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGT ..x.:....:.....::.:.----.....::.x..:.:.:x.x.x:.x..::.x:...xxx:......:....:............:..:xx...:.:..:..... 20M4D82M 68/102 66.7% 102/94230402 0.0% 4/102 3.9% 48962812 NA +3107 chr4 + 190214555 92073019 92073018 92073068 50 TTCTTTTGTCCAATTTCTGGGTTTTTGTTTGTTTGTTTGTTTGTTTTTTG chr4 - 94230402 16311192 16311191 16311241 77919162 77919161 77919211 50 TCTTTCTGCACAATTTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTTTTG .::..:..:x......x.x..x....x....................... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 75761827 NA +3320 chr4 + 190214555 92131636 92131635 92131695 60 TCTCACCAAAAAAAAAAAAAAAAAAAAAAA-----TATATATATATATATATACACACACACACA chr4 - 94230402 60979336 60979335 60979400 33251003 33251002 33251067 65 TCTTGTAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ...:::x......x..x.....x...x...-----........:.:................... 30M5I30M 50/60 83.3% 65/94230402 0.0% 5/60 8.3% 31152300 NA +3245 chr4 + 190214555 92131643 92131642 92131697 55 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACA chr4 - 94230402 70707579 70707578 70707633 23522770 23522769 23522824 55 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..:....x.:.....x.::....x:x...............:..........::. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 21424064 NA +3391 chr4 + 190214555 92131643 92131642 92131694 52 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACAC chr4 - 94230402 70707583 70707582 70707634 23522769 23522768 23522820 52 AAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ...x.:.....x.::....::..................:........::.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 21424060 NA +3031 chr4 + 190214555 92131645 92131644 92131699 55 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACATA chr4 - 94230402 70707579 70707578 70707633 23522770 23522769 23522824 55 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..:....x.:.....x.::..x.x:x.............:.:..........:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 21424066 NA +3420 chr4 + 190214555 92131652 92131651 92131727 76 AAAAAAAAAAAAAAT------ATATATATATATATATACACACACACACACATATATATATATACTGCCTGAATAGATTTTT chr4 - 94230402 64433200 64433199 64433281 29797122 29797121 29797203 82 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAATTTCT .:.....:x......------:.:.:.........x......:......:....::...:...:.:::x..x.x.:....:. 15M6I61M 55/76 72.4% 82/94230402 0.0% 6/76 7.9% 27698452 NA +3453 chr4 + 190214555 92153470 92153469 92153547 78 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATTTCTTGATGACTAATACATTGAA chr4 - 94230402 86961494 86961493 86961567 7268836 7268835 7268909 74 aaacaAACAAACAAAAAAAAAATATATATATACATATAACAGTAGAAATATATGTTTATTG----CTTTTACATTAAA ...x...x...x....................:.....xxx:..x.x......:...x...----..xx......:.. 61M4D13M 59/74 79.7% 74/94230402 0.0% 4/74 5.4% 5191976 NA +3006 chr4 + 190214555 92163797 92163796 92163838 42 CATCCAAAACAAAGAAAAACAAACAAACAAACAAAAAAATAG chr4 - 94230402 84107495 84107494 84107536 10122867 10122866 10122908 42 CATTAAGAAAAAACAAAAACAAACAAACAAACAAAAAAATAG ...:x.:..x...x............................ 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 8056302 NA +3622 chr4 + 190214555 92185557 92185556 92185642 86 CAGGTGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGAAGAAGAATTGTCTTGGGCCACACATAAAA----TACACTAATAGTA chr4 - 94230402 9885857 9885856 9885946 84344457 84344456 84344546 90 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagta ....xx.:.....:...:..x........:......x..::x...x.:.....::..x....::..:x...:.----.:.x..:.x.... 73M4I13M 61/86 70.9% 90/94230402 0.0% 4/86 4.7% 82299700 NA +3051 chr4 + 190214555 92191719 92191718 92191775 57 CATGGATACATAGATGAAAAAAGAAAGAAAAAGGAAAGAAAAGAAAGAAAGAAAGAA chr4 - 94230402 59685551 59685550 59685607 34544796 34544795 34544852 57 CATGCCTACAAAAATAGCAGGAGAAAGTAAAAGGGCAGGAAAGAAAGAAAGAAAAAA ....xx....x.:..::x.::......x......:x..:...............:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 32506168 NA +3054 chr4 + 190214555 92196272 92196271 92196330 59 ATAGATATATATGTGTATATATATATATATATATACACACACACACACACATACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:..:...x.::....:...::x..:..xx.:...............:.x..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 83800468 NA +3038 chr4 + 190214555 92247531 92247530 92247591 61 TGTTTTCTGTAGTTTTTGTTATTTTTTTGTTTTTGACTTTTTGTTACCCTTTACAAATAAT chr4 - 94230402 56625475 56625474 56625535 37604868 37604867 37604928 61 TGTTTTCTGTTTTTTCTGTTTTTTTTTTGTTTGTTGCATTTTTTTAACCTTCAGAAACTAT ..........xx...:....x...........x.x:.x....x...x....:.x...:x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 35622056 NA +3308 chr4 + 190214555 92293227 92293226 92293307 81 TCAAAAAAAAAAAAAAAAAAAAAAAAGTATATATATTATATATATATATATATATTATATATATGTTTATGTCGCAATTTG chr4 - 94230402 19678120 19678119 19678196 74552207 74552206 74552283 77 TTAAAAAAGAAAAACAGAAAAAAAAAGTGTAT----TACATACATATATTTTTATTACATATCGCATAACAAGGCAATTTG .:......:.....x.:...........:...----..:...:......x.x.....:....xxxx.x.::xx........ 32M4D45M 58/77 75.3% 77/94230402 0.0% 4/77 5.2% 72615107 NA +3085 chr4 + 190214555 92299802 92299801 92299861 60 GGGAAGAGGGAAGGAAAAGGAAAGGAAGGGAAGGGAAGAAGAAAGGGAGAGATGAAGAGA chr4 - 94230402 87603528 87603527 87603587 6626816 6626815 6626875 60 GGGAAAAAAAGAGGCAGAGGAAAGAAAGAGAGGTATGAAAGACAGGGAAAGATGAAGAAA .....:.::::...x.:.......:...:..:.x:x::....x.....:.........:. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 4696274 NA +3176 chr4 + 190214555 92299855 92299854 92299916 62 GAAGAGAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGGGGAGGGGAGGGAAGGCGAAGG chr4 - 94230402 69066687 69066686 69066748 25163655 25163654 25163716 62 GGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGG .:....:.:.:.::..:..:..........x...x....:.::.:.....x.::..:.::.. 62M 42/62 67.7% 62/94230402 0.0% 0/62 0.0% 23233168 NA +8356 chr4 + 190214555 92307873 92307872 92308110 238 TGAATTATGCTTCTACTTTGAGCCTATGCATTGATTGAGTAATTTCATCAGACCCACATTACTTGATTGCTTAGAAGTTTCCTAATGATCTGCATGCTGTAGGAAGAACCAAAAAGTCGTGAGTGGAATGGCAATGATACTGTGTTTTATGAGGCTATTCAGAAGTCGCTCTGATTTATGTAGCTAGAAAGCTCCAAAGTCTTTGAGATTAGCCACGCTGACTGCTATTTTCTTCATA chr4 - 94230402 56632456 56632455 56632688 37597715 37597714 37597947 233 TAGACTATGC-----CTTACAGTTCAGGGATGGAATGAGCCATTTCATTGGGCTTGCATAACTTGAATACTTCACAGTTTAGTAATGATCTGCACAGAGAAGGGAGAATCCAAATGCTTGGAGAAGAGTGGCAATGACATTGTATTTTATAAGACCATTCAGAAATGTTCATAATATACAAAGCTCAGAAGGTTCTAGATCTTTGATATTATCCATATGGCCTGCTGCTTTTTTAATA .::.:.....-----...xx..:::.x.x..x..x....:x.......::.:.:::...x......x.:...x:x.....xx............::xx.x...:....:.x...x.::xx...x:..:.........:.:...:......:..:.:........:.xx::x.:..x..::x....x::...x.:.x.::.......x....x...:::x.x.....::...:..x... 10M5D223M 153/233 65.7% 233/94230402 0.0% 5/233 2.1% 35675417 NA +3178 chr4 + 190214555 92318275 92318274 92318332 58 TGGATATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTTGGTAAGC chr4 - 94230402 8681933 8681932 8681990 85548413 85548412 85548470 58 TAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGC .::........:...:.::.:.:.:...:.....x:.:..............:x:... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 83636342 NA +3044 chr4 + 190214555 92318280 92318279 92318325 46 ATATATGTGTGTATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735396 1495007 1495006 1495052 46 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTT ....x.:.:.....:..:.:...............:.x........ 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% -417071 -93813331 +3349 chr4 + 190214555 92324535 92324534 92324622 88 AGGTTTCCTATGCTATGTTTATCCTCAATAATAAACTTTTATATACACATACATACATACAGACACACACACACACACACACACACAC chr4 - 94230402 8395774 8395773 8395861 85834542 85834541 85834629 88 AAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC .::..:..:.x..:....x.:.x:x::xxx......x.x...x....:..::..:.x....xxx.:.................x.... 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 83928761 NA +3313 chr4 + 190214555 92385869 92385868 92385972 104 AATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATGAAATACACAGTTCATTTGCCCTTGAAATAAGTCCTCCAATAGGAAA chr4 - 94230402 35554960 35554959 35555058 58675345 58675344 58675443 99 AATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATAC-----AAACAGTTTTTCCAACAGACAA ......:x..x.........::::.:..x............::...:.x.x..:.:.::.:xx.xx......xx.:.-----...:.:x.::.....:..:x.. 77M5D22M 65/99 65.7% 99/94230402 0.0% 5/99 5.1% 56830909 NA +3036 chr4 + 190214555 92385881 92385880 92385920 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 2564599 NA +3214 chr4 + 190214555 92385886 92385885 92385942 57 GTGTGTGTGTGTGTGTATATATATATATATATATATATATGAAATACACAGTTCATT chr4 - 94230402 9151856 9151855 9151912 85078491 85078490 85078547 57 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAGGAGTGAAAAGTCCTTT .......................x....x.:.......xx.:.:.:x.x...:.x.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 83234030 NA +3190 chr4 + 190214555 92408380 92408379 92408477 98 GCCTTTGGCTTTGTGCTTTTT----------TTGCTTACAATTATATTGCCTATTCAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGTTGTTTT chr4 - 94230402 81444554 81444553 81444661 12785742 12785741 12785849 108 GCTTCTTGCTTTGCTATGTTTGAATTTCAAATTGACTTGAAATGGATAGACTTTCCAAGGTGGTTTTTTGTTGTTATTTTGTTTGTTTCTTTTTGTTGTTGTTGTTTT ..:.:.x......:xx.x...----------...x:.xx..x.:x..x.x..x.:....x.xx......x..x..x....x...x...:......:............ 21M10I77M 70/98 71.4% 108/94230402 0.0% 10/98 10.2% 10963826 NA +3114 chr4 + 190214555 92408420 92408419 92408484 65 CTATTCAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGTTGTTTTAAATGAA chr4 - 94230402 2862503 2862502 2862567 91367836 91367835 91367900 65 CTACTAGAGCATGCTTTCCTTTTTCCTTCTTTTTTTCTTTCCTTGCTGTTGTTAGTTGAAACAAA ...:.x:...x:x:...::.....::..:.......:...::...........:x..x...::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 89545917 NA +3114 chr4 + 190214555 92408420 92408419 92408484 65 CTATTCAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGTTGTTTTAAATGAA chr4 - 94230402 2832638 2832637 2832702 91397701 91397700 91397765 65 CTACTAGAGCATGCTTTCCTTTTTCCTTCTTTTTTTCTTTCCTTGCTGTTGTTAGTTGAAACAAA ...:.x:...x:x:...::.....::..:.......:...::...........:x..x...::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 89575782 NA +3009 chr4 + 190214555 92408435 92408434 92408488 54 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTGTTGTTTTAAATGAACTTT chr4 - 94230402 20380499 20380498 20380552 73849851 73849850 73849904 54 TTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTAAATTAATCTT ..x....x......x...x...x.......:.......x..:.....x..::.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 72027936 NA +3036 chr4 + 190214555 92411636 92411635 92411675 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 2590354 NA +3115 chr4 + 190214555 92415701 92415700 92415767 67 TGCGCATGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959562 32959561 32959628 61270775 61270774 61270841 67 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ...:xx...:.::x.:.:::..x....x......:...:.......:.......:.x......x:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 59456139 NA +3221 chr4 + 190214555 92420760 92420759 92420831 72 CTGCAACATCCACCTTCTGGGTTCAAGTGATTCTTATGCCTCAGCATCCTGAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:.x:xx.x................x...x:.x.x......x.::::.........:.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 74223634 NA +12848 chr4 + 190214555 92425133 92425132 92425438 306 AATTTTCTGTAGAAAGAGAAGTAAGGAAG--ATGATTTTTTTCC--ACATGAGTATCATTATTAAGTAGACGACAGCAA----ATACAACCAAGAAAATCCATCTTTGAAGTGTGCTAAAGGGTGGCT-CGTTTAGATATGGCAATTAATCACTGCATTATTTATAGTACTTTAGGAACAGCTCATACTACATTAATCAGGGATAACTTCTGCTTAATTAACAAGACTGCCAAAAAATGTCAAACACAAGCACAAAAACACAATGGAATAAAAACAAGAAAACAAGTGTTAGCTAGCGACTGATCACCACAAAGT chr4 - 94230402 56676602 56676601 56676906 37553497 37553496 37553801 305 AATTATTTGGAAGAAAACAAAAAATGGAGTAATAATTTTTTTTCTGAAGTCAGTGTCTGTAATACGTATGAGAATGGGACATCATTTCACCAAAACAATCCATCTGTGAAGTGTGCTAAGGGATGACTGCATTTGGATACAGCAATTAATCACCACATTATTTATAGCACTTCAGAAGCAGCTTACAGTACATTAATCAGGGATAACTTCTGCTTAATTAACAGAGCTGCC-AAAAACGTCAAACAAGACCATAAAA---------AATAGAATTGAGTAAGGAAGAATTAGCAAGGGACTGATAATCATGAAAT ....x.:..x.::..:.x..:x..x.:..--..:........:.--.x:.x...:..xx..x..x...x:x..xx.x:.----..x:x.....:.x.........x.............:..:..:..-.:...:....::............::............:....:..:.:.....:.:.x...................................:::.....-.....:........x:.x..:....---------....:..x::..x..:x...x:.....x..x.......x.:..::..:. 29M2I13M2I33M4I45M1I102M1D25M9D49M 222/296 75.0% 305/94230402 0.0% 19/296 6.4% 35748531 NA +3062 chr4 + 190214555 92452826 92452825 92452905 80 TATATATATATTTACCATATATATATATTTACCATATATATTTTTTTACCATATATATATATTTACCATATATATATATG chr4 - 94230402 20465238 20465237 20465317 73765086 73765085 73765165 80 TATATATATATGTAACATATATACACGTTTACTGTTGCTCTATTCTTATATAATATATATTATCTTCTTATAAATATATG ...........x..x........:.::.....::.xxx.x.x..:...:xxx........xx.:x:.x....x....... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 71987588 NA +3574 chr4 + 190214555 92485298 92485297 92485367 70 GTGCATATATATATATATATATATATATATATATATATATATATATATATAGTGTGTGTGTGTGTGTGTG chr4 - 94230402 60813610 60813609 60813679 33416724 33416723 33416793 70 GCGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGTATCCATG .:...:...::.::.x.:..:.:....:.x............:.....x:.....x.......:.x::.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 31671688 NA +3669 chr4 + 190214555 92499703 92499702 92499772 70 CTTCTGGGTTCATGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGGACGCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ............x.:.x...x.xx.x........::.............:....x.--:.......::.. 56M2D12M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 74302564 NA +7553 chr4 + 190214555 92505048 92505047 92505250 203 GTGCGAAGATGGCATCAAGTAGTAGAGTTAATCTACAAAACTTGAGAGCTTTTACACTACATAAACCATAGTGGCTTTTTGAATAGCCTCATAAAACGCAGTGTCATTGCCATTCTGCTCACAACATGTGGATTCTCTCTTCTGCAAATAGAAT----AGGACTCTTGGAGCAATCA--TAATGTAAGCCCACTGAATTTTCTCATTTA chr4 - 94230402 56722306 56722305 56722514 37507889 37507888 37508097 209 GTATGAAGAAAATACCAGGCAGCGTGGCTAATCTCAAAGACTTTGGAGCTTTCCAGCTACATAAATCAGAGCAAGTTTTTGAATAGCCTCATAAAACACAAAATCATTGCCATTCCACTCACGACTGTCACATTCTTCCTACAGCATACAGATCATTAAGAAACTTCTAAGCAATCAAGTAATGTGGGGCTGATGAAATTACTCAATCA ..::.....x:::.:..:.:..::x:.:......xx..:....x:.......:xx:.........:..x..:::x......................:..:x:............::.....:..xxx::x.....::..x.x...x.:...x:----..:.x::.:x:........--......::.x.::x....x..x....x.:. 154M4I19M2I30M 136/203 67.0% 209/94230402 0.0% 6/203 3.0% 35782742 NA +3171 chr4 + 190214555 92507415 92507414 92507459 45 TTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATGAAGGGCAT chr4 - 94230402 9061369 9061368 9061413 85168990 85168989 85169034 45 TTGTGTGTACAGGCGTGTGTGTGTGTTTATGTATATGAAAGGCAT ........:::x.:..............:...:......:..... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 83446046 NA +3091 chr4 + 190214555 92517868 92517867 92517946 79 TATCAAAGATGAACAATATTTTCAGATAGGCAAAAACAAACAAACAAACAAAAAACCAAAAAAACCCACTGTATTGTAA chr4 - 94230402 64774679 64774678 64774757 29455646 29455645 29455724 79 TACCATAAATGAGATATACTTTGAGATGTCCAAAAACAAACAAACAAACCAAAAAGAATAATAATTTCTACTATTGTGA ..:..x.:....:xx...:...x....:xx...................x.....xx.x..x..:::x:xx......:. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 27743189 NA +3127 chr4 + 190214555 92600024 92600023 92600064 41 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.......................:..:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 2778743 NA +3003 chr4 + 190214555 92600027 92600026 92600079 53 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:....:.x:...x..:.:.:.::...:.:.:.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 21617398 NA +3239 chr4 + 190214555 92611052 92611051 92611123 72 ATATATATGTGTGTGTGT------ATATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGT chr4 - 94230402 81401293 81401292 81401370 12829033 12829032 12829110 78 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGT ....x.x.....x.....------.......:..:x.x...:..:..x.............x:...x::....x:... 18M6I54M 55/72 76.4% 78/94230402 0.0% 6/72 8.3% 11209759 NA +3033 chr4 + 190214555 92611071 92611070 92611158 88 TATATATATGTGTGTATATATATGTGTGTGTGTATATGTGTGTGTATGTGTGTGTGTGTGCATGTGTGTGTGTGCATGTGTGTGTGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ..::.::...::.:..:.:.:.::x:.:.:::...x.x...:..:......x..::....x..:.......x.x.x..x:.x.x.... 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% 20980936 NA +3198 chr4 + 190214555 92634842 92634841 92634910 69 CATTCGTTGCAGAGAGACAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAATTGAGAGATT chr4 - 94230402 40766136 40766135 40766204 53464199 53464198 53464267 69 CGTATGTTGCAGAGAAACAGAGAGAAGGGAAGAGAAAAAGCCAAAGGGGGAAGCAGGAATCATGGGGTT .:.x:..........:.........::.::.....:....xx.:..:.:..::x..:...::x.:.:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 51868706 NA +3323 chr4 + 190214555 92652900 92652899 92653016 117 ATAAATATATATTT-----ATAAATACATATAAATATATATAAACATATATTTATAAATATATATAAACATATTTATAAATACATATAAATATATATAAATATATATAAATACATATATATA chr4 - 94230402 2492084 2492083 2492202 91738201 91738200 91738319 119 ATAAATGAGTATTTGAAGTATAAA---ATATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCACAAGAAAACATATCTATA ......:x:.....-----.....---.....x.:x:..:..x.::.x.x.x...:x..x.x.:..:..x.x.:...x.........:x...x......x.x:.:.x:..x......x.... 14M5I5M3D95M 79/114 69.3% 119/94230402 0.0% 8/114 7.0% 90160816 NA +3445 chr4 + 190214555 92652900 92652899 92653016 117 ATAAATATATATTT-----ATAAATACATATAAATATATATAAACATATATTTATAAATATATATAAACATATTTATAAATACATATAAATATATATAAATATATATAAATACATATATATA chr4 - 94230402 2495682 2495681 2495800 91734603 91734602 91734721 119 ATAAATGAGTATTTGAAGTATAAA---ATATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCATAAGAAAACATATCTATA ......:x:.....-----.....---.....x.:x:..:..x.::.x.x.x...:x..x.x.:..:..x.x.:...x.........:x...x......x.x:...x:..x......x.... 14M5I5M3D95M 80/114 70.2% 119/94230402 0.0% 8/114 7.0% 90157218 NA +3380 chr4 + 190214555 92658764 92658763 92658833 70 AATGTGTTTGCATGTATGTGTGTGTGTGTGTATATATATATATATATATATATATACACACACACAATCA chr4 - 94230402 70982617 70982616 70982686 23247717 23247716 23247786 70 AACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCA ..:x.x...x.x...:.......:........:....:.x:...x..:.:.:.::.:.......:::... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 21676147 NA +3078 chr4 + 190214555 92709558 92709557 92709626 69 CAAAATAGTGTAGAGAAAAAAAAAAAAAAAAAATATATATATATATATATAT---------GTAATT-TGATCATTCTC chr4 - 94230402 69437726 69437725 69437804 24792599 24792598 24792677 79 CAATGCAATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGTTCTTTCTC ...x::.:.x.x..:.......x........xx...................---------......-..x..x..... 52M9I6M1I11M 57/69 82.6% 79/94230402 0.0% 10/69 14.5% 23271832 NA +3344 chr4 + 190214555 92723861 92723860 92723982 122 TTACCTCTTGTTTGTAAATATGATTAAATGAGCATATTCAAAATAGCT-ATTAAAATCATAATTATTCAAAATGATTTTTTTCGTATTAAATGTTCATAGGGACTTTTTCTTTTTTCCACTGT chr4 - 94230402 9910111 9910110 9910221 84320182 84320181 84320292 111 TTACATCTTATGTATAGGTCTTATT------------TCAAAATAGGTCAGCTCAATCATTATTATTTAAAATGATTTTTCTTTTAATTAACCATATTAAAGACTAGTTTTATTTTTCACTGT ....x....:.x.:..::.x.x...------------.........x.-.x:xx......x......:............:.:x..x.x..:xx.xx..::....xx..:.x....:...... 25M12D11M1I74M 78/110 70.9% 111/94230402 0.0% 13/110 11.8% 82813750 NA +3136 chr4 + 190214555 92790091 92790090 92790139 49 AATGTATGTATATATGTATGTGCGTATGCGTGTATACATATATAAGTAT chr4 - 94230402 30175546 30175545 30175594 64054809 64054808 64054857 49 AATATACATGTATATAAATGTGTGTATGCGTGTAAACACATACAAGTAT ...:..::.:.....:x.....:...........x...:...:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 62614545 NA +3162 chr4 + 190214555 92790130 92790129 92790221 92 ATATAAGTATATATAGTTATACATATAAGTATATACACATCTAAATATGTATGTGTACATAGATACTTATTTATACAAATATATGTATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..:::.......xx:.:...:.:...x.:....:...xx:.:.x..:.::....:xx..::.:...xx......x....x.:.x..... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 88372787 NA +3566 chr4 + 190214555 92790491 92790490 92790573 83 CTGCAGGCTGAATTTCCTGGGTTCAAGTGATTCTCTCACCTCACCTGTCCAAGTAGTTGGGACTACAGACATGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:...x.::..x:.:.............x...x.xx:x....x.:x.:.......:...:.....--..:........:::. 66M2D15M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 74593365 NA +3478 chr4 + 190214555 92810867 92810866 92810940 74 CTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCAGATTATCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:...........x...x..x.x........::x:.x..x....:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 74613741 NA +3084 chr4 + 190214555 92815913 92815912 92815967 55 TCAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAACAAAAAGCCAAAAAAA chr4 - 94230402 49250047 49250046 49250101 44980302 44980301 44980356 55 TTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAA .:.........:..........:.::x.:.....:....x::..:......x:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 43565866 NA +3355 chr4 + 190214555 92815917 92815916 92815985 69 AAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAACAA-AAAGCCAAAAAAAAACCAACCAAAAAAAAAA chr4 - 94230402 21758989 21758988 21759058 72471345 72471344 72471414 70 AAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA ..:........:....:........:::.:.x......-...x...:..:....:.x::x.:.:...... 38M1I31M 51/69 73.9% 70/94230402 0.0% 1/69 1.4% 71056928 NA +3173 chr4 + 190214555 92857245 92857244 92857329 85 ACATCTCTCACTTTTAATCAAAGGCTAGAAATAATTAAGCTTAGTGAGGAAAGAGTGTTGAAAGCCAAAATAGGCTGAAATCCAG chr4 - 94230402 48179310 48179309 48179394 46051009 46051008 46051093 85 ACTTCTCTTCCTCTCATACAACAGCAAAAGATGAATTATACCAGTAAAGAAAAAATGTTGAAAGCAAAATGATTCTGAAATCCAG ..x.....:x..:.:.xx...x:..x.:.:..:.x.x.xx::...:.:....:.:..........x...xx.xx........... 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 44677935 NA +3240 chr4 + 190214555 92910188 92910187 92910243 56 ATAGGAGTGGTTTGAAAAAAATAAAAATAAAAAAAAAAAGTAAATGCT-CAGGACTT chr4 - 94230402 19954652 19954651 19954708 74275695 74275694 74275751 57 ATACAAATAGTTTGAAAAGATTAAAAAAAAAAAAAAAAAGTAAGTGCTGCAGGATCT ...x:.:.:.........:.x......x...............:....-.....::. 48M1I8M 46/56 82.1% 57/94230402 0.0% 1/56 1.8% 72955536 NA +3339 chr4 + 190214555 92949145 92949144 92949218 74 TGTGTGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGTATTTAACGAGTAGCTT----CTAAAATTTTGAG chr4 - 94230402 18982315 18982314 18982392 75248011 75248010 75248088 78 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTGATAATTTTGTGCCTGAGAGTTTGAG .......x..........x.x..............:.:...:xx.....x::..xx.x:..----..:.:.x...... 61M4I13M 56/74 75.7% 78/94230402 0.0% 4/74 5.4% 73966830 NA +3561 chr4 + 190214555 92949149 92949148 92949194 46 TGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGTATTTA chr4 - 94230402 18982315 18982314 18982360 75248043 75248042 75248088 46 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTA ...x...........................::....:..x..... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 73966834 NA +3243 chr4 + 190214555 92954143 92954142 92954273 131 TCTCAAATATAGATATATCAATATATAAATATGAAAAAAGCATACTATGTGTGTGTGTGTATATATGTATA--CACACAAACATATACACACACATATATATATACAAACACATACACACATATATATACAAA chr4 - 94230402 73121097 73121096 73121215 21109188 21109187 21109306 119 TCTCGTGTGCATGCATATTCATACACATATACACAGAA--------------GCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAA ....:x:.::.x::....:x...:.:.x...::x.:..--------------.::..x...:...:.....--:....:.::....:::x::.......x...::.xx...x.x........:....x:.... 38M14D19M2I60M 75/117 64.1% 119/94230402 0.0% 16/117 13.7% 19833046 NA +3367 chr4 + 190214555 92954196 92954195 92954268 73 TGTGTGTATATATGTATACACACAAACATATACACACACATATATATATACAAACACATACACACATATATAT chr4 - 94230402 66904840 66904839 66904912 27325491 27325490 27325563 73 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...x.x:.........:::.....x.....:............x..x:.x..:::::.....xx....:::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 26049356 NA +3091 chr4 + 190214555 92991917 92991916 92991982 66 TTTTTTTAAATACAAAAATGTATTTTCCAATACTTTATATCAACGTATGTGAGGGGAATAAGAGGT chr4 - 94230402 69443488 69443487 69443548 24786855 24786854 24786915 61 TTTTTTTAAATACAAAAATGTATTTCCTTATACTCCCTTTTAAC-----TGATGTAAATAACAGGT .........................:.:x.....::x.x.:...-----...x.x:.....x.... 44M5D17M 49/61 80.3% 61/94230402 0.0% 5/61 8.2% 23548429 NA +3039 chr4 + 190214555 93009659 93009658 93009705 47 TTTTTTATTGTTGTTTGTTTGTTTGTTTGTGGTCTTTTTGCCCTTAG chr4 - 94230402 72617525 72617524 72617571 21612832 21612831 21612878 47 TTTGTTGTTGTTGTTTGTTTGTTTGTTTCAGTTCTTTTTGCTTCTAG ...x..:.....................xx.x.........:::... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 20392134 NA +3021 chr4 + 190214555 93017769 93017768 93017842 74 AGGACTCCAGCCAGGACAGAGCAAGGCTCCTTTTCAAGAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAATAA chr4 - 94230402 16908607 16908606 16908680 77321723 77321722 77321796 74 AGGACCAGAGAAAGAAAGAAGCAAAGTTAATCTTAAAGATTAAAAAAAATAAAAGAAAAGAAAACACAAGGTAA .....:xx..xx..:.x::.....:.:.xx.:..x....xx........x..............x.x..::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 76109162 NA +3491 chr4 + 190214555 93025053 93025052 93025156 104 AAGCCTTCATTAATATTTGTTGATGG------AAGAATGAAGGAAGATAGAAAGTAAAGAAAGAGGAGGGAGGGAAGAAGGGAGGGAGAGAGGTAAAGAGAGGGAGAGAA chr4 - 94230402 40465757 40465756 40465862 53764541 53764540 53764646 106 AAGTTACCATTAGAGTCTGGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGA----AGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAA ...::x:.....:x:.:..xx..x..------........:::...:....:.----..x...:...::x:..x:x.:.........:.....x..:.......::.:.. 26M6I21M4D53M 68/100 68.0% 106/94230402 0.0% 10/100 10.0% 52559296 NA +3242 chr4 + 190214555 93041891 93041890 93041930 40 TTGTTGTTGTTGTTTGTTTGCTTGTTTTTTGAGACATAGT chr4 - 94230402 64800073 64800072 64800112 29430291 29430290 29430330 40 TTGTTGTTGTTGTTTGTTTGTTTGTTTCCTGAAACATAGT ....................:......::...:....... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 28241818 NA +3034 chr4 + 190214555 93042675 93042674 93042745 71 ATATCTATATATATATGCATATATATATGCATATATATATAGATATATAGAGAGAGAGATAGAGAGATAAA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ....xx..:...x..x:x:.:.:::.:..::....:.:...x...:.:...........x.x.......:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 59643872 NA +13197 chr4 + 190214555 93050164 93050163 93050508 345 ACAATGTATAGCCCTGCAAATTGCAGAAGTTCAGTTTGGTAGTGGCATC--TTCATTTAATATTGTTGCAATAGCCAGTCAACCATTAAATAAAAGTTCCTGAAATCCTGGTATC---------------------TCCTCTTATTCTTTTA--TTTTTAATTAAAGCTGCAGAGAGTCATTGACTGAAATGTCTTCTATCCTC--GTTGCTTTTTTAAAAAAATTTACCTCAGTC-TTTTATACTCCTCCTTAATCATGAATGCAAATAAAATTCAAAGTGTAATCAGCAGCTGCTGAAAGAGAGCACTGAGCAAACTGGGTTGCCGTGGAAACCATGAAGTCAGTCCTTGACCAGACAAAGAATAATACCT chr4 - 94230402 56330354 56330353 56330719 37899684 37899683 37900049 366 ACATCATAAAGCTATG-AAATATAAGTAATTCATCATGATGATGATAGCAACCCTTCTAATACCTTTGCAACAATAATTTGTTGATTAAATACAATTTTCTAAAATTTCACCATCATTTTCCATCCGTTTCTTTCCTTCCCCCCTCCTTCTACTTTTTTAATTAAAGCTTCTAAGGAGCATTGATTGAAAGGTCTTTTATCCTCTTATTGCTTTTTTAATTC--TTTACCTCAGCCCTTTTATGCTCCTCCTTAATCACGAATGCAAATAAAATTCAAAGTGTAATCAGCAGCTGCCTAAGCAAAGCACTGAG----CTCCGTTGCTGTGGGAACAGCCAAGTCAGTCCTTGACCAGAGGAAGCATTACACTT ...x::..x...:x..-....xxx..x.:....x:x..:.::..::.x.--::.x.:.....::x......:.::x.x.::x:x........x..x..:..:....::::x:...---------------------.:.:.::x.:...:..--...............x.x:..::x......:.....x.....:.......--:............xxx--..........:.-......:..............:.....................................:x..:x.:.........----..xx.....:....:...x::x...................x:...x..x.:..:. 16M1D32M2I64M21I16M2I50M2I16M2D12M1I76M4D56M 249/338 73.7% 366/94230402 0.0% 35/338 10.4% 36719810 NA +3001 chr4 + 190214555 93129326 93129325 93129376 51 TAGCTTAATGTTGAAATACTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 39732470 39732469 39732520 54497883 54497882 54497933 51 TATCTCAATGCTAAAATTTCCATTTTTCTGCTTGTTTGTTTGTTTGTTTTT ..x..:....:.:....x::xx.....:..:.................... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 53396856 NA +3014 chr4 + 190214555 93145618 93145617 93145666 49 CCAGCTAGTTTTGTATTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 72884646 72884645 72884694 21345709 21345708 21345757 49 CCAGACAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCT ....x:...:....x::....::..:...........:.........:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 20260972 NA +3445 chr4 + 190214555 93154635 93154634 93154768 134 AAAGTATCTGATTGAAGAAACAAGGGGGTGTGGTTAATAGGCATTTAATGAGTATTTGTGAACTTTCTGAGAAACCTCATTATCTTCTCTCTGTATTCGTGGCAAAAAAACAAAAACAAAAACAAACAAACAAA chr4 - 94230402 71516613 71516612 71516730 22713673 22713672 22713790 118 AAAATAAGTGATTTAAAAATAAAAAAAATGCAG--------------ATGATCTTTAAGGTAGTTTTTGAAAAA--TCATTTACTACTTTCTGTCCTGAAGGCAAAAAAACAAAAACAAAACAAAACAAAAAAA ...:..xx.....x..:..xx..:::::..::.--------------....x:x..x:x.x.x...:...:...--.....xx..x..:.....x:.x:x.....................xx.......x... 33M14D27M2D58M 82/118 69.5% 118/94230402 0.0% 16/118 13.6% 21638022 NA +3033 chr4 + 190214555 93154749 93154748 93154787 39 AACAAAAACAAACAAACAAAAAAAACACCACCACCACCA chr4 - 94230402 58540478 58540477 58540516 35689887 35689886 35689925 39 AACAACAACAAACAAACAAAAAAAACACCACCACAAACA .....x............................x.x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 34614271 NA +3020 chr4 + 190214555 93168257 93168256 93168311 55 GGAAGAAAGAAAGAGAAAGGAAAGGAAAGGGGAAGAAAGAAAGAGAAAGAAAGAC chr4 - 94230402 77186077 77186076 77186131 17044272 17044271 17044326 55 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACAC .:........x:.:.:::..:::...::.........::.....:.......x.. 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 15982180 NA +3835 chr4 + 190214555 93257940 93257939 93258027 88 AAAATATGTATATATACA-----TATACACACAA-TATGTGTGTGTATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964791 14964790 14964884 79265519 79265518 79265612 94 AAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.:::.x......x.-----.:.:x......-.....x..:..:.::.:.::.:...:........xx........::............. 18M5I11M1I59M 65/88 73.9% 94/94230402 0.0% 6/88 6.8% 78293149 NA +3541 chr4 + 190214555 93257944 93257943 93258022 79 TATGTATATATACATATACACACAATATGTGTGTGTATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATA-------AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.....:.:.:....-------..:....:.x.::....:...::x..:..xx...................x..... 16M7D56M 55/72 76.4% 72/94230402 0.0% 7/72 9.7% 84862153 NA +3237 chr4 + 190214555 93257951 93257950 93258034 84 ATATACATATACACACAATATGTGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACAATACTG chr4 - 94230402 10913773 10913772 10913856 83316547 83316546 83316630 84 ATACACATATCTGTCCAGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCACTCCCAAGACTG ...:......x:::x..:xx.x:x.:.....:...:.:..:...x.:...:.........:..x.x..:x...x.x...x.... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 82344178 NA +3334 chr4 + 190214555 93257961 93257960 93258025 65 ACACACA-ATATGTGTGTGTATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.-..:.x..:....::.:.::.:...:......:.xx........::............. 7M1I58M 49/65 75.4% 66/94230402 0.0% 1/65 1.5% 78293142 NA +3295 chr4 + 190214555 93257969 93257968 93258029 61 TATGTGTGTGTATATATATATATATATATATACAC--------ACACACACACACACACACACACACAA chr4 - 94230402 8395795 8395794 8395863 85834540 85834539 85834608 69 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA ........::..x.:..:...x..:....:..::.--------.:.................x...... 35M8I26M 49/61 80.3% 69/94230402 0.0% 8/61 13.1% 84862174 NA +3258 chr4 + 190214555 93257970 93257969 93258034 65 ATGTGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACAATACTG chr4 - 94230402 14964825 14964824 14964889 79265514 79265513 79265578 65 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTG ..:...x..::.:.::.:.::.:...:....:...xx........::............x.::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 78293145 NA +3004 chr4 + 190214555 93257971 93257970 93258013 43 TGTGTGTGTATATATATATATATATATATACACACACACACAC chr4 - 94230402 69934570 69934569 69934612 24295791 24295790 24295833 43 TGTGTATGCATTTAGTTATATACATATATACACACACACACAC .....:..:..x..xx......:.................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 23323401 NA +3328 chr4 + 190214555 93257971 93257970 93258023 53 TGTGTGTGTATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.....:.:.::.:...:......:.xx........::............. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 78293139 NA +3372 chr4 + 190214555 93264858 93264857 93264940 83 CTGCAACCTCTGCCTCCCAGATTCAAGTGATACTCTTGCCTCAGCCTCTCAAGTAACTGGGACTACAGGTGCCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:.::.:........x.x.x.xx.x........:.......:....:......x...--.:....::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 75067732 NA +3160 chr4 + 190214555 93270603 93270602 93270661 59 TTTCTTCTTCTTGTTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTGAGGTGGAGTCTCAT chr4 - 94230402 75766775 75766774 75766833 18463570 18463569 18463628 59 TTTGGTTTTTTTGTTTTTGTCTGTGTTTTGTTTTGTTTTTTATTGCCATGAATTCACAT ...xx.:..:..........:.x..................x...xx:..:.x..x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 17503828 NA +3003 chr4 + 190214555 93314289 93314288 93314354 66 GTGAGAGTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAATGAAAAAAAC chr4 - 94230402 65532695 65532694 65532760 28697643 28697642 28697708 66 GTAAAAATTATTATCAAATGAGGAAAAAAAGAAAAAAAATAGAAAAAAAAAGAGCATTGAAAAAAC ..:.:.:.:xx.x.....x:.::.......:........x....:..:..::..x..x:....... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 27781594 NA +3437 chr4 + 190214555 93314299 93314298 93314356 58 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAATGAAAAAAACAC chr4 - 94230402 6438506 6438505 6438563 87791840 87791839 87791897 58 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATGACAC ....:.....:.....::............:..:....:..::::...:.:.x:.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 86875793 NA +3249 chr4 + 190214555 93316284 93316283 93316371 88 GAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAAGAAAAAG chr4 - 94230402 36858295 36858294 36858377 57372026 57372025 57372108 83 GAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTC---AAAGGGAGAAGGAGGACAGG--GACAAGAAAAGAAAAAG ....x.:.x..x.....x...::...:.........:.x..x.:xx---....::.......:.:x...--.:x.:............ 46M3D20M2D17M 61/83 73.5% 83/94230402 0.0% 5/83 6.0% 56457989 NA +3553 chr4 + 190214555 93316310 93316309 93316433 124 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAAAGAAAAAGAAAGAAAGAAAGAATAGAAAAGGAAGG-AAGGAAGGAGAAGAAAAGA-ATG-AAAGAAGAAAGAA chr4 - 94230402 45355411 45355410 45355537 48874866 48874865 48874992 127 AAGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA ...::.:.:...x.x...x.xx::....x.:.:::..x:.::........x..x...x.........x.::x..:.x.x........::-..:..xxx.x..:..:...-...-:.......:.... 89M1I19M1I3M1I13M 83/124 66.9% 127/94230402 0.0% 3/124 2.4% 47960899 NA +3139 chr4 + 190214555 93332279 93332278 93332318 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 74349964 NA +3102 chr4 + 190214555 93332281 93332280 93332316 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 11703217 NA +3353 chr4 + 190214555 93332281 93332280 93332320 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 74349966 NA +3316 chr4 + 190214555 93332283 93332282 93332318 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 11703219 NA +3567 chr4 + 190214555 93332283 93332282 93332322 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 74349968 NA +3102 chr4 + 190214555 93332285 93332284 93332320 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 11703221 NA +3473 chr4 + 190214555 93332285 93332284 93332328 44 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAACT chr4 - 94230402 18982315 18982314 18982358 75248045 75248044 75248088 44 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATT ................x...................::..:.:. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 74349970 NA +3097 chr4 + 190214555 93359843 93359842 93359910 68 ACAAAAGGGCATAGATAAGGAAGGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGGGGTCAA chr4 - 94230402 3442083 3442082 3442150 90788253 90788252 90788320 68 ACAAAGGGGAACAAACAAGCCTTATAGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAA .....:...x.:.:.:...xxxx:.:x:......::..:..::.....:..........x.:...... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 89917760 NA +3816 chr4 + 190214555 93370364 93370363 93370545 182 TACACACACAGACA---TACACACACACAAACACACACAAACACACACACACAAACACACACAAACACGCACACACAGGCACACACACACACGC----ACACACAAACACGCACACAGAGACACACACACACACGCA---------------CACACACACACA-CGCACACACAG-TTCCTTGATATTGCAGTCACACAGAATTG chr4 - 94230402 73121077 73121076 73121282 21109121 21109120 21109326 206 TACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACACCGATGCTTTGACATTTCATCACCAAGTAATTG .....x......x.---..xx.x.:::::x.::..:.:xx.:.....:.:...x.x.x:..::.::..::..::.:...:....:x::.:.:.:----...:.:...:....x..............:::.:.x...---------------..x.:..:.x..-.x..:....x.-.x.:....:...x..x:xx..x:x..... 14M3I77M4I39M15I12M1I11M1I29M 114/182 62.6% 206/94230402 0.0% 24/182 13.2% 20249287 NA +3061 chr4 + 190214555 93390818 93390817 93390878 61 TCTATATATAGATATATGTATACATATTTGTATATATATGTGTGTGTATATATATGCTGGT chr4 - 94230402 19704275 19704274 19704335 74526068 74526067 74526128 61 TCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGT ....x...:.x.....:.....:..x.x.....:.x:..........:.:.:x..x:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 73686543 NA +3531 chr4 + 190214555 93404502 93404501 93404587 86 CTCTATGATTCTGTTTCTTCATCTGTACAATGGAGATAATATAAATTACCTACCTCATAAAGCTGTTATAAAAATTCAAATAACTA chr4 - 94230402 66214163 66214162 66214247 28016156 28016155 28016240 85 CTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAGGTG-CAGGAAGGTTTAAATCACTA ....:.:x:x.x:.....:........x.....::.......x:x.......:...x..:..x..-:.x:..::..:....x.... 65M1D20M 60/85 70.6% 85/94230402 0.0% 1/85 1.2% 27190339 NA +3012 chr4 + 190214555 93423322 93423321 93423391 70 TATTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCCTCCA chr4 - 94230402 76182407 76182406 76182476 18047927 18047926 18047996 70 TATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTTCATCA ...x:.....:.x..x.:..:xx........x............:...x.:..xx.:::.....:.x:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 17240915 NA +3402 chr4 + 190214555 93430256 93430255 93430337 82 CTGCAACCTCCGCCTCCTGGGTTCAAGCGACTCTCCTGCCTCAGCCTCCCAAGTAGCTGTGATTACACGCACCCACCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGT ..:..:..:xx:x..:...........:.x:..x.xx.x........::..........x:.:......::--......::. 71M2D9M 56/80 70.0% 80/94230402 0.0% 2/80 2.5% 75233130 NA +4020 chr4 + 190214555 93448770 93448769 93448981 212 ATTAGTAGTCTTGGCCCTCCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC------------------------TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCTTCCCTTCCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCC-CTTCCCTTTC--------CCTTCCTTCTTTTCTTCTTTCCTTCCTTCTTCTC chr4 - 94230402 46931237 46931236 46931480 47298923 47298922 47299166 244 atttctgatttttgtccttttttctctttttcctccttcactatttcttcctttttctctccAGGAGCAGCTGCTGACACGGATCTTTTCCTTCTGTTCCCTTTCCTTCCACTCCCCACTACATTCCATTTGCATCTCCGTCCTCTCCTACCCAAATGCATCACTCTTTCTCCGTCTCTCCCTGACCTTCCCACTGCACTATCACAGAATGTCAACCCGCTTCCCTTC-TTCCAGCCTCCTCCTC ...xx.::.:..x.:...::::.::.:..::.:...:.:x.:x.::.....:..::..::..------------------------..:.....:x.......:......x:.....x::x.x.:..x..:x.x..:..x...::...:x:..xxx.x.x.:x.::.::..:.x:..::..:.xx.......-..x.x..x..--------:.xx..:x...::....-....xx...:..:... 62M24I106M1I10M8I17M1D16M 126/211 59.7% 244/94230402 0.0% 34/211 16.1% 46517533 NA +4220 chr4 + 190214555 93448794 93448793 93449001 208 CCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCTTCC-----------CCTTCCCTTCCCTTCCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCCTTCCCTTTCCCTTCCTTCTTTTCTTCTTTCCTTCCTTCTTCTCCATCTCCCTCCTATTTTTCC chr4 - 94230402 46931212 46931211 46931428 47298975 47298974 47299191 217 CCTGtttttcctctttgcttcttgtatttctgatttttgtccttttttctctttttcct--ccttcactatttcttcctttttctctccAGGAGCAGCTGCTGACACGGATCTTTTCCTTCTGTTCCCTTTCCTTCCACTCCCCACTACATTCCATTTGCATCTCCGTCCTCTCCTACCCAAATGCATCACTCTTTCTCCGTCTCTCCCTGACCTTCCC ..:x.:::.:.:...:x....::x.x::.::xx..:::x...:..::::..::..:...--.....x.:x.::.....::..:.::...-----------.:xx.x.xxx:...::.....:x.......:......x..:...x::x.x....x:..x.x.:...x.:.::..:.x:.:xxx.x.x.:x..::......:....:.:.:x.::..:.. 59M2D28M11I119M 115/206 55.8% 217/94230402 0.0% 13/206 6.3% 46517582 NA +3051 chr4 + 190214555 93453293 93453292 93453358 66 CTATACAAAACTCAGAGATGGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 58393257 58393256 58393322 35837081 35837080 35837146 66 CTGCACAATGCTCAAACATGAGCAAGAAAGAGCATGTGAGAGAGAGGGAGGTACAGAGAGAGGAGG ..::....x:....:.x...:.x....:....x:x.x.........:...:x.x........:::. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 35060036 NA +3790 chr4 + 190214555 93467610 93467609 93467746 137 TGTGCTATTGTTGTACTGATTAAAGGGTTAAGGCCACTTAGCCTTTAGTCCTCTGCCTTACATCACCACCCAAGGAGTGCTATAATCCTCTAGAAATGCATTGCCTGCAGTGTGGCACTGCTTAATAAATCACTCCA chr4 - 94230402 53212318 53212317 53212445 41017958 41017957 41018085 128 TGTGCTTTTGGT----TGGTTA-----TCAAAGTCACTTGGCCTTTAGCCTTCTGCCTTATCATACCTTCCAAGATGTGCTCTAATGACCATATAGCGCTTTGCATGACGCATCTGATTATTCAATATGTAACTCCA ......x...x.----..:...-----.:..:.:.....:........:.:.........:xx:...x:.....:x.....x....xx:.xx:x.::..x....x..xx.::.xxx.:.::.:....x:.x...... 12M4D6M5D110M 85/128 66.4% 128/94230402 0.0% 9/128 7.0% 40255292 NA +3164 chr4 + 190214555 93517963 93517962 93518032 70 ATATACATACATGTACATGT--ATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTAT chr4 - 94230402 38535895 38535894 38535966 55694437 55694436 55694508 72 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT .....:.:...:.......x--..::.:.....:......:........:...:.x:x...x.x:...x.:. 20M2I50M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% 54982068 NA +3602 chr4 + 190214555 93524727 93524726 93524849 123 AAATACTACAAACAAACATGTTTTTCTAG------ATGCCAAGAAAAAATATATGTATGTATGTGTATATATATATATATATATATATATATATGTATGTATGTATATATATATATATATATATATATA chr4 - 94230402 81401251 81401250 81401373 12829030 12829029 12829152 123 AAATGCTTCAAATA------TTTCTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....:..x....:.------...:.::..------...xx:.:....:....x.x.:...x.....x..x.x.......:...x:x:..:..:.:x:...:...:....x..:.x:....:x..:..:. 14M6D9M6I94M 79/117 67.5% 123/94230402 0.0% 12/117 10.3% 12123476 NA +3118 chr4 + 190214555 93524776 93524775 93524846 71 TATGTATGTGTATATATATATATATATATATATATATATGTATGTATGTATATATATATATATATATATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:..:::..:.....:.:.:.:.x.....:....x.x......:....:.x.::..:.:x....:.:.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 21894641 NA +3170 chr4 + 190214555 93524780 93524779 93524866 87 TATGTGTATATATATATATATATATATATATATATGTATGTATGTATATATATATATATATATATATATATGTATACAAA-TTCTGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ..:...:..::.....:.:.:.:.x.....:....x.x......:..:.:.x.::..:.:x....:.:.:.x.x:x::..-....... 80M1I7M 57/87 65.5% 88/94230402 0.0% 1/87 1.1% 21894645 NA +3245 chr4 + 190214555 93528082 93528081 93528131 50 TGTATGTGTATATATGTGTATATATGTGTATATATGTGTGTGTATATATA chr4 - 94230402 70982629 70982628 70982678 23247725 23247724 23247774 50 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACA ...:.....:...:......:......x:...x.........:...:.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 22545453 NA +3153 chr4 + 190214555 93528143 93528142 93528249 107 ATATATATGCTATATATATATGTATATACATATACACACACACACATATATATCCTGCATTTTGTTT----ATCTGTTCATTATCAACA---GACA------TGGGTTGCTTCTACCTTT chr4 - 94230402 8681917 8681916 8682036 85548367 85548366 85548486 120 ATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTGATTGTCCAGATGTGACAATGGTCTGGTTTGTCTCTTACTTT ....x:...::xx.....x..:......::...:........:.......xx..:.x:x....x...----.x..x..x...:..x.x.---....------...x...::...xx.... 67M4I18M3I4M6I18M 77/107 72.0% 120/94230402 0.0% 13/107 12.1% 84846226 NA +3015 chr4 + 190214555 93560203 93560202 93560255 53 TGTATTCCAGAACTTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA chr4 - 94230402 66541347 66541346 66541399 27689004 27689003 27689056 53 TGCACTCCAGAACTTGAAAAAAAAAAAAAAAAAGAGAGAGAAGAAAATGATCA ..:.:..........:..:x.............:.:.:.:..:....x:.x.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 27018856 NA +3299 chr4 + 190214555 93560219 93560218 93560286 68 AAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAGAAATACCTAAGACTGAGTGATTTATA chr4 - 94230402 61300751 61300750 61300818 32929585 32929584 32929652 68 AATTAACAACAACCAAAAAAAAAAGAAGCAAAAAGAAAAAAGAAACACCCAAGACCAAGTTAGTTGTA ..x...x..x..xx..........:..:x.....:x.:.......:...:.....::...x.x..:.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 32259468 NA +3236 chr4 + 190214555 93608062 93608061 93608272 211 ATATAAGTATATATATGCATATATATACACATATATGTATATATACACACACACATATATGTGTATATATATACGTCTATGTGTATACATATATACACATATGTATTCTGGA---------TTTAATAAGTTGGTTAAAAATTCCTTCCTTATATGTATTACATATGCTCC-------------CCTGGTTTTTCTTATAGGGATTTTATTATTTTATTTTAAACTATTTAGT chr4 - 94230402 64944118 64944117 64944342 29286061 29286060 29286285 225 ATCTTAACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG-ATATA-GTCCTCTTGAAGGAATTGTTTCCGTATATTAGGAAAAAAAACATCC---ATAAGAGCTCCACGTTCTGCAGAATTCCGGTGTCCTAGGTATTCTTTTGTGTGATTGACTATCTTGTTTTA---TATTTAAT ..x.x.::...x...:.:...x...x.:...x............x::::x:xx::...x.x.x...x.:....:.:..x..:..:..::.....:-.:...-..x:...x..---------..:x:..x:..:.xx.....xx.x.:.---...x.x::.x..::.x..x.-------------...:.x.x.....x.:x.x:x..x.:...:..:.....---......:. 95M1D5M1D10M9I27M3D20M13I38M3D8M 129/203 63.5% 225/94230402 0.0% 30/203 14.8% 28663944 NA +3218 chr4 + 190214555 93608074 93608073 93608167 94 ATATGCATATATATACACATATATGTATATATACACACACACATATATGTGTATATATATACGTCTATGTGTATACATATATACACATATGTAT chr4 - 94230402 89016082 89016081 89016175 5214228 5214227 5214321 94 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGAT ..:....:.:..x.:..:::.:.:::.::.x.:.:.........::.x:..:...:.::..x:.x.:....:.x...:x.:::....:.:.x.. 94M 55/94 58.5% 94/94230402 0.0% 0/94 0.0% 4591992 NA +3092 chr4 + 190214555 93608096 93608095 93608161 66 ATGTATATATACACACACACATATATGTGTATATATATACGTCTATGTGTATACATATATACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..:...:..:::...........:.:::::.:....x..x..::.x.........xx:....:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 26703249 NA +3005 chr4 + 190214555 93696899 93696898 93696964 66 CAGAGTCCATGCAAACATGCAATTCGTTCCACATTATAGATATTCAACAATGGATTTTTGAAGAAA chr4 - 94230402 11037034 11037033 11037099 83193304 83193303 83193369 66 CAGAGTTCATGAAAACATGAAATTCTTTCCACATCTCAGTTCAGTGAAAATTGATTTCTGCAGGAA ......:....x.......x.....x........:x:..x.xxx::.x...x.....:..x..:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 82659865 NA +3100 chr4 + 190214555 93705289 93705288 93705338 50 GTTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTTT chr4 - 94230402 44858313 44858312 44858362 49372041 49372040 49372090 50 GTTTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTT ......x...........:..:....x....x:.....x:..x....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 48846976 NA +3221 chr4 + 190214555 93705289 93705288 93705368 80 GTTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTCTTTTTTCTTTTTTTTTTTCTTCTTCCTGAAACAGAGTCTCGCTGTGT chr4 - 94230402 15448974 15448973 15449053 78781350 78781349 78781429 80 GTTTTTGTTTTGCTGTTGTTGTTGCTTTGTTTTTTGCTCTGTTGTTTTCATTTCAACCATGATTCTGAATCATGATCTGT ............:...........:.......:..x:.::x..x....:x.:.:xx:.x...xx.x..:..x:.x.x... 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 78256315 NA +3064 chr4 + 190214555 93745814 93745813 93745884 71 TTTATTTCTTTTTTGTTTGTTTGTTTGTTTTATTTTGACTTTGTGCTGCAGGCAGAGTTAATTAACTCTTT chr4 - 94230402 64624536 64624535 64624606 29605797 29605796 29605867 71 TTTTTTTTTTTTTTTTTTGTTAGTTTGTTTTGCTTTGGCTGTGTCTGTGAAGGGGAGTCAATTCCCTATTT ...x...:......x......x.........::....:..x...x:xxx.:.x:....:....xx..x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 29121278 NA +3104 chr4 + 190214555 93757956 93757955 93757991 36 CAAAAAAAAGAAAAAGAAAGAAAAAGAAAAAGGAAC chr4 - 94230402 39567139 39567138 39567174 54663229 54663228 54663264 36 CAAGAAAAAGAAAAAGAAAGAAAAGGAAAAAGGAAC ...:....................:........... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 54190817 NA +3546 chr4 + 190214555 93838854 93838853 93838947 94 TGGCATGATCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGA---------ACTACACGTGC ......x..x.:-..:..:..:xx.x..:...........:.x...x.xx.x........::............---------......x.... 12M1D61M9D11M 65/84 77.4% 84/94230402 0.0% 10/84 11.9% 75641740 NA +3615 chr4 + 190214555 93873418 93873417 93873512 95 ATACATTTGTATTAAATATATACACACACATATGTACACACATATATATACATATATATATACACAGAGAGAGAGAGAGAGAGATTTATACATAT chr4 - 94230402 33398786 33398785 33398880 60831523 60831522 60831617 95 ACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .:....x:.:.:x:.x:.....x.:::.:x..x:x:::::.:.:.:.:..:.:.:.......................x......xx...::... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 60474632 NA +3220 chr4 + 190214555 93873433 93873432 93873510 78 ATATATACACACACATATGTACACACATATATATACATATATATATACACAGAGAGAGAGAGAGAGAGATTTATACAT chr4 - 94230402 33398803 33398802 33398880 60831523 60831522 60831600 78 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat .....x.:::.:x:.x.x..:::.:::.:.:......:.......:...x...........x.....x.xx...::.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 60474630 NA +3151 chr4 + 190214555 93950066 93950065 93950139 74 TACTCCATTAATCTAAATTTAAAATTATAAATAAAATAAAACAATTACGTTAAAATTTCAAAAAAAAAATCAGA chr4 - 94230402 61048080 61048079 61048153 33182250 33182249 33182323 74 TGTTCCATTATTCTAATTTCAGAATTATAAACAAAATGGAATAATCAAAACAGAATCCCAAGATCAAACGCAAA .::.......x.....x..:.:.........:.....::..:...:.x:x:.:...::...:.xx...xx..:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 32901986 NA +3017 chr4 + 190214555 93955038 93955037 93955089 52 AAACTGTGACCTGTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTCTTTGTT chr4 - 94230402 22454284 22454283 22454335 71776068 71776067 71776119 52 AGGCTGCAGTCTGATTTTTTTTGTTGTTTGTTTGGTTGGTTGTTTTTCTGTT .::...::::...x...........x........x...x......:.:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 71500754 NA +3346 chr4 + 190214555 93955044 93955043 93955090 47 TGACCTGTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTCTTTGTTT chr4 - 94230402 71609798 71609797 71609844 22620559 22620558 22620605 47 TGAGCTGTTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTT ...x.........x......:..................:..:x... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 22345246 NA +3017 chr4 + 190214555 93976433 93976432 93976471 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 24538694 NA +3283 chr4 + 190214555 93984856 93984855 93984981 126 AAAGAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG ...x.:....:..........::.:::..:...:.::xx:x...::.:x:....xxx:.::x..:..xx...:x.:.::..x:.:....:.....:.:..x:xx:.....---..:..:..x.... 110M3D13M 73/123 59.3% 123/94230402 0.0% 3/123 2.4% 63451692 NA +3123 chr4 + 190214555 93984866 93984865 93984945 80 AAAGAAAGAAAGAAAAAGAAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAG chr4 - 94230402 92290881 92290880 92290960 1939443 1939442 1939522 80 AATGGATGGGAGGAGAACAAAGGGAAGGATGAAAGGAAGGACGTGCTGTAGGAAAGCAAGGTTAAAAGGGAAAAAGAAAG ..x.:.x.::..:.:..x....:......x.:.........x.x:xx.x.....:.x.:.:xx:....::.:........ 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 1693985 NA +3008 chr4 + 190214555 93984943 93984942 93985017 75 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGATGTGAAA chr4 - 94230402 25339698 25339697 25339772 68890631 68890630 68890705 75 AAATAAGATAAAGTAAAAGAAAAAAAAAAAAAAAGCAATTCATAGAAAATGAGACCAGGAAACAAAAATGTGAAA ..:x....x.:.:x:.......:...:...:....x..xxx.x.....:x:...xx.:....x...:........ 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 68645245 NA +3283 chr4 + 190214555 94000255 94000254 94000336 82 GGTGGCAGAGTGAGACCCTGTGGAAGGGAAGGGAAGGGAAGGCAAGGAAGAGAGGGAAGGGAGGGGAGGGGAGAAAAGAAAA chr4 - 94230402 47816942 47816941 47817015 46413388 46413387 46413461 74 GGGGGCAGCATGGGAC--------AGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAA ..x.....x:..:...--------..:.....:..:..:x..:::..:::.x..x.::...:....:..........:.... 16M8D58M 52/74 70.3% 74/94230402 0.0% 8/74 10.8% 46183313 NA +3424 chr4 + 190214555 94000284 94000283 94000344 61 AGGGAAGGGAAGGCAAGGAAGAGAGGGAAGGGAGGGGAGGGGAGAAAAGAAAAGAAGAGAG chr4 - 94230402 87012026 87012025 87012086 7218317 7218316 7218377 61 AGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG .......:...x.x::...:...:...::.:.:.....::...x.........:..:.:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 6988258 NA +3148 chr4 + 190214555 94000293 94000292 94000361 69 AAGGCAAGGAAGAGAGGGAAGGGAGGGGAGGGGAGAAAAGAAAAGAAGAGAGAAGAGAAAACAAAAGAA chr4 - 94230402 59863354 59863353 59863419 34366984 34366983 34367049 66 AAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGA---GAAAGAACAAAAATGAAAACACAAAAAAA ...:x..::...:.:...:....:........:..:.---:......x.:.:.x..:..x......:.. 37M3D29M 48/66 72.7% 66/94230402 0.0% 3/66 4.5% 34136939 NA +3030 chr4 + 190214555 94000312 94000311 94000392 81 AGGGAGGGGAGGGGAGAAAAGAAAAGAAGAGAGAAGAGAAAACAAAAGAAAAGGAAAGAAAAGAAAGGAAAGGAAAAGAAA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGA--------AAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA .........:.......:...:........--------....x.:..::...x.::x:....x..:xx.x..:...x.:.. 30M8D43M 53/73 72.6% 73/94230402 0.0% 8/73 11.0% 49599816 NA +3049 chr4 + 190214555 94031423 94031422 94031509 87 CATACACATACACACACATATAAATATACACATGCATATATGTATACATATATATACACACACATATATATATATAAATGTTTAAAA chr4 - 94230402 8395787 8395786 8395873 85834530 85834529 85834616 87 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ...:::::..::::::....x.x..:..:x:.:::..:....:x.....xx...:.........:.:.:.x.:.:.....xx..... 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 85635636 NA +3171 chr4 + 190214555 94053527 94053526 94053637 111 CCCCTGCCA---CCACGCCTGGCTAATTTTTTTTTTTTTTTTTTT--TTTTTGTATTTTTAGTAGAGACGGGGTTTCATCGTGTTCGCCAGGATGGTCTCTATCTCCTGACCTCGT chr4 - 94230402 687916 687915 688029 93542374 93542373 93542487 114 CCCCCGACATCTCCACTTCTGCCTAATCTTTTTTTTTTTTTTTTTCCCCTTTTAGTTTGTAGAACAAA--GAGTTTATTCATTTTGTCCAGAGTTCTCCTGTTCTGCAGACCTCGT ....:.x..---....x:...x.....:.................--::...xx:...x...x.x.:.--.:....xx..:.x..xx....::.xx..::xx...x.x........ 9M3I33M2I21M2D46M 77/109 70.6% 114/94230402 0.0% 7/109 6.4% 93365611 NA +3175 chr4 + 190214555 94078218 94078217 94078279 62 TCTTCATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 9524453 9524452 9524514 84705889 84705888 84705950 62 TCTTCAAGCCTCTTTAGGGCTGTTTTTTTTTTTTTTTTTCCATTTTTTATTCTTAAGACAGA ......x.::.....xxxx:.x.................::x......x..:..:....... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 84553765 NA +3051 chr4 + 190214555 94163454 94163453 94163496 43 ATCTCAAAAAAAAAAAAAAAAAAAAAGAATTCATATGGATTGA chr4 - 94230402 87887207 87887206 87887249 6343154 6343153 6343196 43 ATCTTAAAAAAGAAAAAAAAAAAAAAGATTTCATGTGAAGTGA ....:......:................x.....:..:.x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 6276247 NA +3017 chr4 + 190214555 94185465 94185464 94185505 41 TATTTTATGTGTATATATATATATATATATATATATATATA chr4 - 94230402 10898950 10898949 10898990 83331413 83331412 83331453 41 TATTTTATGTGTGTATATATATATACACATATACACACATA ............:............:.:.....:.:.:... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 83286515 NA +3269 chr4 + 190214555 94194437 94194436 94194510 74 CTGCAACCTCTGCCTCCTGTGCTCAAGCGATCTTCCCAGCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:...x.:.....:.x.::x.xx:.........::...........:......x.::... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 75997311 NA +3390 chr4 + 190214555 94195868 94195867 94195908 41 AACTCCTTTACATAACCTCTCTTTTGTTGTTGTTGTTGTTG chr4 - 94230402 14361195 14361194 14361235 79869168 79869167 79869208 41 AGCTCCTTTAAATAACCTCTTTTTTGTTGTTGTTGTTGTTG .:........x.........:.................... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 79834673 NA +3016 chr4 + 190214555 94340257 94340256 94340349 93 AAACCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 35378844 35378843 35378936 58851467 58851466 58851559 93 AAAATTCTGCTTCTTTCTTTGTTGCTTTCTTTTTAGTGTTGTTCAACTCCATCAGCTTTGTTGATTTTGTTTGTTTTATTTTGTTTTTGTTTT ...x:.:.x:..........x..x........:.xx:x..x..:xx:..:x..xx:...x..xx....x...x....x....x.....x.... 93M 63/93 67.7% 93/94230402 0.0% 0/93 0.0% 58961413 NA +3234 chr4 + 190214555 94340267 94340266 94340336 70 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193303 40193302 40193372 54037031 54037030 54037100 70 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ..x....x.::.....:...:.x.:.:..x..::::xx.:...x.................:.....::. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 54146964 NA +3094 chr4 + 190214555 94340279 94340278 94340348 70 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193303 40193302 40193372 54037031 54037030 54037100 70 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ..x....x.::.....:...:.x.:.:..x...:.:xx::..:x:................:.....::. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 54146976 NA +3554 chr4 + 190214555 94376788 94376787 94376854 67 CTGTCTCAAAAAAAAAAAAGAAAAAAAAAAAAGAATTTACTTTATTGCCTTAGCTTTTTAAATGCCA chr4 - 94230402 56938619 56938618 56938685 37291718 37291717 37291784 67 CTCTCTCAAAAAAAAAAAAAAAAGGAAATAAAGAATTTTCTTTAATGCATTGTCTTCATATGAGCCA ..x................:...::...x.........x.....x...x..:x...:x..x:x.... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 37438169 NA +3286 chr4 + 190214555 94406447 94406446 94406523 77 CCAGAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACACACACATATATATATGTATATAT chr4 - 94230402 87372722 87372721 87372793 6857610 6857609 6857681 72 CTAGATAAGAGAAAAAAAT-----TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT .:...x..:.:.....x..-----...x.x:.x...........x.........:x:.:.::...:..:........ 19M5D53M 54/72 75.0% 72/94230402 0.0% 5/72 6.9% 7033725 NA +3002 chr4 + 190214555 94406462 94406461 94406523 62 ATATATATATATATATATACACACACACACACACACACACACACATATATATATGTATATAT chr4 - 94230402 4481692 4481691 4481753 89748650 89748649 89748711 62 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .....x:.:.:.:...:.:....x...:.....:x....:..x.xx.:.........:.:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 89924770 NA +3423 chr4 + 190214555 94406474 94406473 94406553 80 ATATATACACACACACACACACACACACACACATATATATATGTATATATATATAATTA----------CTCTTTGACCTTGATGGGAAA chr4 - 94230402 66904847 66904846 66904936 27325467 27325466 27325556 90 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAA ......::..::.........:..............x..x:.x:.x:.:....:...:.----------....:x.x:..x:...:.... 59M10I21M 58/80 72.5% 90/94230402 0.0% 10/80 12.5% 27501627 NA +4605 chr4 + 190214555 94411047 94411046 94411165 119 GAACGATGCAGAGAAGATTAACATAGAGTCAGAAAGAAAGAAAGAAA--AAGGAAGGAAGGAAGGAAGAAAGAAAGGAAAGAAAGAAAAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGA chr4 - 94230402 67066591 67066590 67066710 27163693 27163692 27163812 120 gaaagaaagaaagaaaagaaagaaagaa-aagaaagaaagaaagaaagaaagGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAGTAGAGTAATAGTGA ...x..x:x.:....:.xx..x.x...:-x.................--....:................:....:xx..:..x::........:..x:.:..:..:x.:..x..x.:x.. 28M1D18M2I72M 85/118 72.0% 120/94230402 0.0% 3/118 2.5% 27344456 NA +3362 chr4 + 190214555 94411075 94411074 94411180 106 TCAGAAAGAAAGAAAGAA-------AAAGGAAGGAAGGAAGGAAGAAAGAAAGG---------------AAAGAAAGAAAAAGAAAGAAAGAGAAAGAAGAAAGAAAGAAGGAAAGAAAGGAAGGAAG chr4 - 94230402 22228853 22228852 22228978 72001425 72001424 72001550 126 TTAAAAGGAAAAAAAAAATCTCACAAAAGCAA--ATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGGCAG .:.:..:....:...:..-------....x..--.x.:....x...x:.::...---------------.x....:..:...:...:.......:....:...:..x:::.::x....:......x.. 18M7I7M2D20M15I59M 74/104 71.2% 126/94230402 0.0% 24/104 23.1% 72182222 NA +3275 chr4 + 190214555 94465913 94465912 94465968 56 TGTATGTGTGTGTATGTGTGTGTATGTGTGTGTGTGTCTGTTTCTTTTTTTTTTCC chr4 - 94230402 38500857 38500856 38500912 55729491 55729490 55729546 56 TGTGTGTGCCTGCATGTGCGTGTTTAATTGTGTGTATCTATCTTTTTTTTTTTTCC ...:....:x..:.....:....x.:xx.......:...:.:.:............ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 55965056 NA +3954 chr4 + 190214555 94468229 94468228 94468310 82 TGCAGCCTTGAACTCCTGGTCTCAAGCGATCCTCCTGCCTTAGCCTCCCAAGTAGCTGGAACTGCAGGTGTGCGCCACTGTG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:.....:x:.:..:....x:.....:.x.:.x.xx.x..:.....::...............:..--:....:........ 66M2D14M 59/80 73.8% 80/94230402 0.0% 2/80 2.5% 76271102 NA +4306 chr4 + 190214555 94501997 94501996 94502111 115 TGGGGGCTCTGCCTTTTCTG---------------CTACTTTTCTCTCTTCGTTTCCTTCTTTTTCTTCATTTCTCTCCCCTTTTCCCTTATTCCTACTCTTCTTCTGC---TTCCTTTTCTCTCTTCCTTTT chr4 - 94230402 92729397 92729396 92729529 1500874 1500873 1501006 133 TGGGGGCACGGCGTGCTCTGAGACTGGGAAAGGAGCTTCTTTTCCCCCTTCGTTCCCTCCTGTTTTTTCCCTTCTTTCCCAGTTTTCTTtttcttttcccttcctcttcctttcccccttctttctccatttt .......x.x..x.x:....---------------..x......:.:.......:...:..x...:...x:....:....xx...:.:..x.:::.x.:....:...x.---.:..::....:...:.x.... 20M15I74M3I21M 82/115 71.3% 133/94230402 0.0% 18/115 15.7% 1772600 NA +3054 chr4 + 190214555 94530516 94530515 94530571 56 TATATATATATATATATATATATATATATATAGTTTTTCTACTCTTCCTTGTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:.........x........:.:..::..x.x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 1795168 NA +3772 chr4 + 190214555 94544731 94544730 94544813 83 CTACAACCTCCGCCTCTCAGGCTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGCATGTACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx:x..::::..:.......x...x..x.x........::.:...........:....--.:..:.....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 76347605 NA +4537 chr4 + 190214555 94552123 94552122 94552319 197 ATATACAAGTTTTTATTACTGCAGTTGTAAAACAAAGACTTTGATGGCTATTTTTTATGTATCATCACAGTT------------------AACTATTTTCAGAATCTTGAGAGGTTTAATCTCCTTTCTAAGTC------------TTTTATTCCATTTAGTGACAACTGTTTTTTGACAATGTAATATATACTCTAGTATAATTTAAAAATATCTACAAGTTGTCA chr4 - 94230402 34409171 34409170 34409388 59821015 59821014 59821232 218 ATTCAAAAGCTACTAT--CTGAAATTAAGAAACAAAGCATTTACTTGTTAT-----ATGTGTTAGCACTATCTCTCTTTCAGCCAACTTGAACTATTTTCAGCATATAAAGAG--CAGAGCCCATTTTTAAACCATGAAAGCCTCTTTTTAATCCATTTAGAGACAACTGTCCCTTGACAGATCATCACATAGCCTTTTATAATTAAGGAATGCCTGCAAGTTAGCA ..x:.x...:.x:...--...x.:..:x:........xx...:x.x.:...-----....:.:.x...x:.:------------------............x..x.x:....--:x:.x.:.x...:...::.------------.....x.........x.........:::......:xx:.x:.:...x:..xx.......x.::...::..:......:x.. 16M2D33M5D16M18I23M2D19M12I81M 128/188 68.1% 218/94230402 0.0% 39/188 20.7% 60142952 NA +3071 chr4 + 190214555 94563922 94563921 94563989 68 CATTTAGCAATTTTTCTTTTTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTCTGTTTTGAGACAGA chr4 - 94230402 60688290 60688289 60688354 33542049 33542048 33542113 65 CATTTAGGAATCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCC---TTTGTGAAAGA .......x...:...:.............:.:::....:...::::x..:..:.---....x..x... 54M3D11M 48/65 73.8% 65/94230402 0.0% 3/65 4.6% 33875632 NA +3080 chr4 + 190214555 94563929 94563928 94563982 54 CAATTTTTCTTTTTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTCTGTTTTG chr4 - 94230402 84548700 84548699 84548753 9681650 9681649 9681703 54 CAGTCTGTCCTATTTTTTTTTACTTCTTTCCTTTTCTTTTTATGTTCTGCTTTG ..:.:.x..:.x.........x:.......:....:.....x.x.....:.... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 10015229 NA +3112 chr4 + 190214555 94573312 94573311 94573364 53 CATTATTTTTTTTTTCTTTTTCTTTCTTTTTTTCCTCAGAGCATCTGCTGCAC chr4 - 94230402 72269659 72269658 72269710 21960693 21960692 21960744 52 CATTATTTTGTTTTTGTTTTTTTTTCTTTTTTTCTTCATAGCA-CTGAAGCAC .........x.....x.....:............:...x....-...xx.... 43M1D9M 45/52 86.5% 52/94230402 0.0% 1/52 1.9% 22303653 NA +3021 chr4 + 190214555 94589730 94589729 94589792 63 TTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCCTTTTCCTTCTTTCTTTCCTTTTTTTAAATTT chr4 - 94230402 28307736 28307735 28307797 65922606 65922605 65922667 62 TTATTTCCTCTTTTTT-TCCTCTTTCCATTCCTTTTCCTTTTTTTTGTCCTTTCTATAGAATT ..x....:.:.:....-.::.....:.x............:...:.x......:.x..:.x.. 16M1D46M 47/62 75.8% 62/94230402 0.0% 1/62 1.6% 66281994 NA +3570 chr4 + 190214555 94592691 94592690 94592775 85 CATCATGGCTCACTGCACCTCGACCTCCCAGGCTCAAGTGATCCTCCCGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCACAC chr4 - 94230402 18197117 18197116 18197199 76033204 76033203 76033286 83 CATCATGTTCTACAGC--CCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .......x:::..x..--.:x:.x..:.::..:.......x.:.x.xx.x........::..................x.::... 16M2D67M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 76395574 NA +3055 chr4 + 190214555 94665486 94665485 94665522 37 AAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATAA chr4 - 94230402 87676347 87676346 87676383 6554020 6554019 6554056 37 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAA ...............:.:.:................. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 6989139 NA +3196 chr4 + 190214555 94675857 94675856 94675937 81 ATAACTCTTT-----TGTTTTTTAAATTAGTTTCCTTTTAATTTTAGGGTTTTTTTTCTTTTTTTTTTTCTTTTTCTTTTTTTTTT chr4 - 94230402 33215651 33215650 33215736 61014667 61014666 61014752 86 ATAACCCCCTGAACATGTGTTCTTCATCAGTTGCTTTTTTTTTCTGAAGCCTTTTTCCTTTTTCTTTTTCTTTCCTCTTTTTTCCT .....:.::.-----...x..:.xx..:....x.:....xx..:.:::.::.....:......:.........::::......::. 10M5I71M 55/81 67.9% 86/94230402 0.0% 5/81 6.2% 61460206 NA +3286 chr4 + 190214555 94683311 94683310 94683402 92 TGGCGTCATCTCGGCTCACTGCAACCTCTGCCTCTAGGGTTCCAGCGATTCTCCTACCTCAGCCTTTCAAGTAGCTAGGATTACAGGTACAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....:....x.:------..:..:..:xx:x..::x......x..:.x...x.xx:x...................:.:.:....x..:... 12M6D74M 60/86 69.8% 86/94230402 0.0% 6/86 7.0% 76486197 NA +3259 chr4 + 190214555 94710725 94710724 94710775 51 CTCAAAACCAACAAAAAAAAACAAACAAACAAAAAAAACAAAAACAGAAAA chr4 - 94230402 40382562 40382561 40382611 53847792 53847791 53847841 50 CTTAAAACCAACAACAAAAAACAAACAAACAAAAAAAA-ACCAACAGCAAA ..:...........x.......................-.xx.....x... 38M1D12M 45/50 90.0% 50/94230402 0.0% 1/50 2.0% 54328163 NA +4028 chr4 + 190214555 94713415 94713414 94713488 74 CTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:...........::x...x.xx.x........::...........:......x...... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 76516289 NA +3143 chr4 + 190214555 94714174 94714173 94714245 72 ATATATATACGTGTGCATGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTATGTCTGTAACCTGCAGT chr4 - 94230402 19704282 19704281 19704352 74526051 74526050 74526121 71 ACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT-TTTTCAATCTACAAT .:..........:.::..x.....:...x.:..............x:.x.xx..:.-.:.x:..:..:..:. 56M1D15M 51/71 71.8% 71/94230402 0.0% 1/71 1.4% 75009892 NA +3025 chr4 + 190214555 94721613 94721612 94721662 50 TGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTTAGCCTTCAAATT chr4 - 94230402 2726045 2726044 2726094 91504309 91504308 91504358 50 TGGATTTATTCTTCTTTTTTTTTTTTTTTTTACCATTTGGCTTCCTTATT ...:...x..:..:...................x....:..:.:.xx... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 91995568 NA +3127 chr4 + 190214555 94790981 94790980 94791039 59 GGTCTTTTTGTTTGTTTGTTTTTCTGAGATGGAGTCTTGCTCTGTTACCTAGGCTAGAG chr4 - 94230402 64129162 64129161 64129220 30101183 30101182 30101241 59 GGTTTTTTTGTTTGTTTGTTTTTCCAGCATTAATTTTTTCTGTGTCATCTAAGCTTGAG ...:....................:::x..x:.x.:..x..x...:.:...:...x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 30661819 NA +3002 chr4 + 190214555 94887378 94887377 94887420 43 TACCACCTTCACCCCCACCCCCCACCAAAAAAAAAAAAAAAAA chr4 - 94230402 65683077 65683076 65683119 28547284 28547283 28547326 43 TGCCCCCCTCTCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAA .:..x..:..x.....x......x................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 29204301 NA +3719 chr4 + 190214555 94887380 94887379 94887455 76 CCACCTTCACCCCCACCCCCCACCAAAAAAAAAAAAAAAAAAAACAAGA--AGCAGAAGAAAACTGTGTCTACATTCT chr4 - 94230402 73016642 73016641 73016719 21213684 21213683 21213761 78 CCATTTCCACCCCCCCCCCCCCCCAAAAAAAAACCAACCAAAAACAACAACAACAAAAAAACATTGTGTGTTCATTCT ...::.:.......x......x...........xx..xx........x.--.:..:..:..x.:.....x.x...... 49M2I27M 59/76 77.6% 78/94230402 0.0% 2/76 2.6% 21870738 NA +6239 chr4 + 190214555 94894255 94894254 94894409 155 AGATCACCCTG------GGTCTCTGTGACCTTGGCAACATTTCAGGGGTTACATTTTCACATAGATCAACTGTTCTTGAATAGTTTCTCCAATATATT-GGCACAGACCAGCTTTTCTTAA--ACAG--TAAGCATTTATACCTTCTTTCCCCACCTTTTTTCCCT chr4 - 94230402 52696895 52696894 52697055 41533348 41533347 41533508 161 AGATTGCTCTGCTGTTTGGTCTCGCTGACCTTGGCAGCATTTCAAGGGTTGCAGTTATACACGGATGAACTGCTCTTGAACAATTTTTCCGACATATTAGGCACAAACTAGTTTTTCCTCAGTGCAGGCCAAGCAGGTCTGTCTT-----CCCACCTGTTTATTCT ....::.:...------......xx...........:.......:.....:..x..x:...::...x.....:.......:.:...:...:.:.....-......:..:..:.....:.x.--:...--:.....xx.x.::...-----.......x...x::.. 11M6I81M1I22M2I4M2I16M5D16M 114/150 76.0% 161/94230402 0.0% 16/150 10.7% 42197360 NA +3488 chr4 + 190214555 94898022 94898021 94898094 73 CTGCAACCTCAAACTCCTAGGCTCAAGGGACCCTCCTACCTCAGCCTCCTGAATAGCTGGGACTACACGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:x..:..:..:..:.....x.x::.x.xx:x........::::.:.......:............ 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 76700896 NA +3046 chr4 + 190214555 94902223 94902222 94902276 54 CACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 27250139 NA +3129 chr4 + 190214555 94902225 94902224 94902278 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 27250141 NA +3212 chr4 + 190214555 94902227 94902226 94902280 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 27250143 NA +3295 chr4 + 190214555 94902229 94902228 94902282 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 27250145 NA +4333 chr4 + 190214555 94940198 94940197 94940339 142 TTATGGCAAGCTTGTCCAACCCGTGGCCCACAGGCAGCATGCAGCCCAGGACAGCTTTGAATGCGGCCCAACACAAATTCATAAACTTTCTTAAAACATTATGAGATATTTTTGCAATTTTTCATTTTTTTTAAGCTCACCA chr4 - 94230402 75796532 75796531 75796664 18433739 18433738 18433871 133 TTAGGGCACATGTATCCAACCCAGGGCCCACGAGCTGCATGCAGCCCTAGACAGCCAGTAATGTGACCC--CACAAGGTCACACAC-TTCTAGCATTACTATGTGAT-TTTTAGCAAT-----ATGTTTCATGAGTTGATCA ...x....x::x.:........:x.......::..x...........x:......:xxx....:.:...--.....:x...:.x..-....x:x.x:.:....x...-....x.....-----..x...:x.:..:.x.:.. 69M2D15M1D20M1D10M5D19M 95/133 71.4% 133/94230402 0.0% 9/133 6.8% 19143666 NA +3196 chr4 + 190214555 94940204 94940203 94940262 59 CAAGCTTGTCCAACCCGTGGCCCACAGGCAGCATGCAGCCCAGGACAGCTTTGAATGCG chr4 - 94230402 10959672 10959671 10959730 83270673 83270672 83270731 59 CAAGCATGTCTAACTCACAGTCCACAGGCTGCATGCAACCTGGCACAGCTCACAGTGCG .....x....:...:.:::.:........x.......:..::.x......:xx.:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 83980532 NA +3107 chr4 + 190214555 94947061 94947060 94947099 39 AAACAAACCCCCCAAAAACAAACAAACAAGAAAACCAAA chr4 - 94230402 24300067 24300066 24300105 69930298 69930297 69930336 39 AAAAAAACCCCCAAAAAACAAACAAACAAAAAAACCAAA ...x........x................:......... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 70646994 NA +4083 chr4 + 190214555 94962039 94962038 94962156 118 TTTATTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT-----------TCCTTCTTTCCTTCCTTCCTTCCTTTCTTTTTTCTTTTT chr4 - 94230402 45185615 45185614 45185743 49044660 49044659 49044788 129 TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x:.x:...x................x...:.:x....:....:...:..xx:..:.:....:..:x...xx.x.:.-----------..:....xx..x:..:.xx.::...x:.:......:... 79M11I39M 80/118 67.8% 129/94230402 0.0% 11/118 9.3% 49776424 NA +3649 chr4 + 190214555 95006617 95006616 95006693 77 CTGCAACCTCTGTCTTCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGCGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x....::........x.x...x.xx.x........::.x.........:.:....x.:....... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 76809491 NA +3135 chr4 + 190214555 95012021 95012020 95012071 51 AAACAACAACAACAACAACAAAAAAAAAAAAGAAAGAAAAAGAAAAGATGG chr4 - 94230402 66344311 66344310 66344361 27886042 27886041 27886092 51 AAACAACAACAACAACCACAAACAGTAAAAGGAAAGAATAGGACAAGCTGG ................x.....x.:x....:.......x.:..x...x... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 28667710 NA +3074 chr4 + 190214555 95012022 95012021 95012072 51 AACAACAACAACAACAACAAAAAAAAAAAAGAAAGAAAAAGAAAAGATGGA chr4 - 94230402 12139747 12139746 12139797 82090606 82090605 82090656 51 AACAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGA ..........:.............:.::..:..x::..:::......x... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 82872275 NA +3584 chr4 + 190214555 95026074 95026073 95026179 106 TGGCTGGCTGGATTGCTTTCTTTCATTTCTTTCTTTCTTTC-------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-------TCTTTCTCTTTTTCTCTTTCTGT chr4 - 94230402 70187542 70187541 70187661 24042742 24042741 24042861 120 TGGTGAGCTGCTTTGCTTTCCTTTGTTTGTTTCTGTATGTTTGTATGATTTCTGTTTGTCTCTTTTTCCTTGTTTTCTACCTTTTTTCTTTTACTACTTTTACTCTTTCACTCCTACTGT ...:x:....xx........:..::...x.....x.x.x.:-------.....x.:.x...:.:....:..x...::.x.:..:......-------.:..x......:x...:.x.... 41M7I42M7I23M 75/106 70.8% 120/94230402 0.0% 14/106 13.2% 24838532 NA +3060 chr4 + 190214555 95026097 95026096 95026179 83 CATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTCTCTTTCTGT chr4 - 94230402 49363790 49363789 49363872 44866531 44866530 44866613 83 CATTTCATTTCTTCTTTCTTCCCCCTCCTTTGTCATTTTTTCTGTATTATTCTATTTCTTTCCTAGTTATTTGCTGTCCCTGT ......x..::.........:.::::::.:.x..x..:.....x.x..x:.:.x........:.xx.:x...x..x.::.... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 45662307 NA +3517 chr4 + 190214555 95026836 95026835 95026912 77 CTGCAGCCTCAAAATTCTGGGTTCAAGAGATTGTCTTCCCTCAGCCTCCCAAGTAGCTGGGACTAAAGGCATGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.....:x..:x.............x.x..xx.xxxx........::...........:....x.x.::::.... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 76829710 NA +3942 chr4 + 190214555 95031525 95031524 95031610 86 CATAGTGTACTATAGCCTTGAACTCCTAGACTCAAGCAATTCTCCCACCTCAGCTTTTCAAGTAGCTGGGACTACAGGGACACAAC chr4 - 94230402 18197117 18197116 18197202 76033201 76033200 76033286 86 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ...x:...x...:....:x:.:..:..:.::.....::x...x.xx:x......:..............:......x.x:...x.. 86M 60/86 69.8% 86/94230402 0.0% 0/86 0.0% 76834408 NA +3196 chr4 + 190214555 95071586 95071585 95071680 95 CAAAATTGCAATCAGTAAAGCA-----TAGATTATGAATATATATGTGTGTTTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATA chr4 - 94230402 40286066 40286065 40286164 53944239 53944238 53944337 99 CAATTTTGGCACCAATAAACCAGATCTTAGTTTGTCAGCAGCCAT-TGTGCTAATGTGTGTGTGTGTGTGTGCATATAAATTTAGAAACATAAGTATATA ...xx...xx.:..:....x..-----...x..:.x.::.xx:..-....:.x:..................:.....x..x..x.x.:...x:...... 22M5I18M1D54M 68/94 72.3% 99/94230402 0.0% 6/94 6.4% 54785520 NA +3026 chr4 + 190214555 95071629 95071628 95071670 42 TGTTTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 19559286 19559285 19559327 74671076 74671075 74671117 42 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA .:...x.x.x..............................:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 75512343 NA +3080 chr4 + 190214555 95071629 95071628 95071675 47 TGTTTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 9151847 9151846 9151893 85078510 85078509 85078556 47 TGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ..:..x.xx.......................x....x.:....... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 85919782 NA +3036 chr4 + 190214555 95071633 95071632 95071672 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 5250351 NA +3630 chr4 + 190214555 95076561 95076560 95076630 70 ATTATTATCATCTTCATTTTACAGATGAGGAAATGAAAGTTCATGGAGGTTAAGTAAATTGTCTGAGGTC chr4 - 94230402 10729193 10729192 10729262 83501141 83501140 83501210 70 ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....:.....x..:..........:..:.:...:x:.:.:x...:x...........x...:.::::... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 84347368 NA +3297 chr4 + 190214555 95087115 95087114 95087184 70 GCCTCCAGGCTCAAGTGATTCTCCTGCCTCAGCCTCTCTAGTAGCTGGGATTACAGGTGTGTGCCACCAC chr4 - 94230402 18197138 18197137 18197202 76033201 76033200 76033265 65 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..::..:.......x...x.xx.x........:..x.........:.:....x...-----...... 59M5D6M 51/65 78.5% 65/94230402 0.0% 5/65 7.7% 76889977 NA +4029 chr4 + 190214555 95091215 95091214 95091337 123 TCAGTGACATTTTTTTCATTCTTTTTCCTTTTTCTTTTCTTTCTTTTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTGT---TTTGTTTTTGACTCCTAGGTTTCTT--TTCTTTTTTACCTTT chr4 - 94230402 82822526 82822525 82822653 11407750 11407749 11407877 128 TCAGCCCCACTCTCCTTACTTTCCTTCCTTATTCTTGTTTTGCTTTTGGGGTTTGGGGCTGTTTTTTGTTTGTTTTGTTTTGTTTGTTTGTTTTTCACTCTTTGATTTTTTTATGCTCTCTCAACTTT ....:xx..:.:.::.:.:.:.::......x.....x.:..x.....xxxx...xxxx:.x.....xx...............---.........x....:.x.:...:..--.x..:.:.:.x.... 83M3I25M2I15M 85/123 69.1% 128/94230402 0.0% 5/123 4.1% 12268689 NA +3658 chr4 + 190214555 95091223 95091222 95091334 112 ATTTTTTTCA------TTCTTTTTCCTTTTTCTTTTCT---TTCTTTTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGACTCCTAGGTTTCTTTTCTTTTTTACC chr4 - 94230402 17604569 17604568 17604686 76625717 76625716 76625834 118 ATTTTTTCCACAGTCCTTCTGTATTTGTTTTCCACTCTGTTCTCTCTGTTCCACTTCTATCCTATTTGTTTT---TTGTTTTGTTTTGTTTTCACTTCGCAGCTTCTTTCCCTTGTTTACC .......:..------....x.x.::x.....:x:...---:...:.x..:.x:....x.::.x........---.................::x:..x:..x..::..::...x...... 10M6I22M3I31M3D46M 78/109 71.6% 118/94230402 0.0% 12/109 11.0% 77486654 NA +3157 chr4 + 190214555 95091254 95091253 95091327 74 TTTCTTTTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGACTCCTAGGTTTCTTTTCTT chr4 - 94230402 38415417 38415416 38415486 55814917 55814916 55814986 70 TTTCCTTCTAATTTTCCTCTTTTTGTTGTTTTTTTTTGTTTTGTTTTATCTAGAACTC----ATGTCTTATCTT ....:..:.xx:...:..:.....x.......x..............:.:.xx:....----:.x....x.... 58M4D12M 53/70 75.7% 70/94230402 0.0% 4/70 5.7% 56675837 NA +3001 chr4 + 190214555 95094350 95094349 95094419 70 GAAAAGTAAAAGGCAGTAAAATGAAGCAAAAGAAAGAGGAATTGAGGAAGAGGAGAGCCAGGAAGGGGAA chr4 - 94230402 56738086 56738085 56738155 37492248 37492247 37492317 70 GAAAAATCAAAAGCCAAAATACAAAACAAAACAAAAAATAAAAGAGGAAGGGGAGGGCCTGGAAGTTGAA .....:.x...:..x:x..x.::..:.....x...:.:x..xx.......:....:...x.....xx... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 38356264 NA +3038 chr4 + 190214555 95097244 95097243 95097296 53 GAGAGAAGAGAGGGGAGGGAGGGACAAAGGAATAAAAGAAAAAAAT-GGCAAAA chr4 - 94230402 44400495 44400494 44400548 49829855 49829854 49829908 54 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAA ...:..:.:.:......:..:...x.:.:...x........:....-....... 46M1I7M 42/53 79.2% 54/94230402 0.0% 1/53 1.9% 50696749 NA +3153 chr4 + 190214555 95116585 95116584 95116634 50 TTTCATGACTTTGTTTTGCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTG chr4 - 94230402 50117639 50117638 50117688 44112715 44112714 44112764 50 TTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ..:..x....x...x..::.:...........:.:.:............. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 44998946 NA +4133 chr4 + 190214555 95120614 95120613 95120730 117 CTTCCTTCCTTCCTTCCT----------TCCTTCCTTCCTTCCTTCCTTTCCTTCCTTCCTTCTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTT--TTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.........x.x.:.----------...:.....--......::...:..::.x:...:.x.x..:.x....xx....xxx:....x.:...:.:.............x.xx..:::...:... 18M10I9M2D88M 81/115 70.4% 125/94230402 0.0% 12/115 10.4% 52038714 NA +3593 chr4 + 190214555 95120621 95120620 95120748 128 CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT-----TTCCTTCCTTCCTTCTTCTTTCTTTTCTTTT-CTTTCTTTCTTTCTCTCTTTCTCT----CTCTCTCTCTTTCTCTCTCTCTCTTTCTGTCTGTCTCTCTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:..:xx.x:x..:.........x.x.:.-----.x.:x...:.....:.:....:......:.:-.::..:x.x..:.x:.::xx:...----:...x.:.................:.x.:x..x::...:... 31M5I31M1I24M4I42M 84/128 65.6% 138/94230402 0.0% 10/128 7.8% 52038734 NA +3641 chr4 + 190214555 95120655 95120654 95120778 124 CTTCCTTCCTTCTTCTTTCTT--TTCTTTTCTTTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTTCTGTCTGTCTCTCTCTTTCTCTCTCTCTCTCCCTCCCTTCCTCCCT chr4 - 94230402 43081900 43081899 43082022 51148381 51148380 51148503 123 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTT---TCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTT ..:.........x.x:...xx--.x..x.:.:.:....---..::.:...:......x.:...:x.x.::.x:.::xx.....xx:x...x.:..................:x.xx....:..::. 21M2I15M3D85M 80/121 66.1% 123/94230402 0.0% 5/121 4.1% 52038755 NA +3011 chr4 + 190214555 95130682 95130681 95130748 67 TTTCTCTACTCCTACAGGTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 14160024 14160023 14160090 80070313 80070312 80070379 67 TTTTTCTACTTCAAAAGGTTTTGTTTACTTCCTTGCCATTCTCATTATTTTTCTTTTTCTTTTTCTT ...:......:.x.x.......x..:x:..:...x:.x..:::x..x.....:.....:.....:.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 80970658 NA +3022 chr4 + 190214555 95155459 95155458 95155515 57 TTAAACACAAAGAAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTGCA chr4 - 94230402 2273553 2273552 2273609 91956794 91956793 91956850 57 TCAAATCCAAATAAAGCTTTTTTTCTTCTTTTCTTTTCTTTTTTCCCCTACCATGTA .:...:x....x............:..:....:....:......::::..x::..:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 92881906 NA +3082 chr4 + 190214555 95157591 95157590 95157640 50 TCAGGTTTATAGTTTATGTATGTGTGTATATATATAAATATATATGTATA chr4 - 94230402 85036768 85036767 85036817 9193586 9193585 9193635 50 TCAGGTTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTA ...........x:x.....:................x.....x:.x.:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 10120823 NA +3168 chr4 + 190214555 95159476 95159475 95159516 41 AAAAAAAACAAAAAACAAAACAAAACAAAACAAAAACCCAG chr4 - 94230402 21291814 21291813 21291854 72938549 72938548 72938589 41 AAAAAAAACAAAAAACAAAACAAAACAAAAAAACAACCGAG ..............................x..x....x.. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 73867662 NA +5049 chr4 + 190214555 95160422 95160421 95160543 122 CTGCTCTTTCCCCTTTCTTTCTTTTCTTTCT-----TTCCTTCCTCTGTTTTCTTTTTTT-------TCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCC chr4 - 94230402 92729569 92729568 92729701 1500702 1500701 1500834 133 cttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCC-CCCACCTTTCTTCTCTTCC ..x..x.....x:............:...:.-----.........:.:..::.:.:x.x.-------.x.....:::...:..x..:.....:.:...:.....x..:.:....-...x..:.:.:..:..... 31M5I24M7I47M1D19M 89/121 73.6% 133/94230402 0.0% 13/121 10.7% 2430853 NA +3258 chr4 + 190214555 95160425 95160424 95160500 76 CTCTTTCCCCTTTCTTTCTTTTCTTTCTTTCCTTCCTCTGTTTTCTTTTTTTTCTTTCTTTCTTTTCTTTTCTTTT chr4 - 94230402 9693767 9693766 9693835 84536568 84536567 84536636 69 CTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCC-------TATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ..::....:..::.....::..:......:x.....-------.x.....x..x...:.......:.:....::.. 36M7D33M 51/69 73.9% 69/94230402 0.0% 7/69 10.1% 85466658 NA +3260 chr4 + 190214555 95160432 95160431 95160494 63 CCCTTTCTTTCTTTTCTTTCTTTCCTTCCTCTGTTTTCTTTTTTTTCTTTCTTTCTTTTCTTT chr4 - 94230402 27426817 27426816 27426879 66803524 66803523 66803586 63 CCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTT ..:x....:..:..x.:.x..x:..:....:.x.:.....:.....:.........:.x.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 67733615 NA +3092 chr4 + 190214555 95171186 95171185 95171237 52 TAATCTACTATAAATGCCATCTCTCTCTATTTTTTTTTTCTTTTTTATTTAT chr4 - 94230402 41620702 41620701 41620753 52609650 52609649 52609701 52 TAATATTCCATGAATGTTATCTCTGCCTATTTTGTTTTTCTCTTTTATCTAT ....x.x.:..:....::......x:.......x.......:......:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 53550484 NA +3450 chr4 + 190214555 95196941 95196940 95197071 131 ATGTAATATATAATATATATTTATATATTATATTTATGTAATATATAATATATATTTATATATTATATTTATGTAATATATAATATATATTTATATATTATATTTATGTAATATATAATATATATTTTTAT chr4 - 94230402 40247371 40247370 40247479 53982924 53982923 53983032 109 ATAAAAGAAATTATCTGTATTTGTTTTATATATT---GTACTATATGATATAGTTT-------------------ATATGTAATATGTATTTACATATTATACTTTTATACATTCCTATATTTATTTTTAT ..:x..x.x..x..x.:.....:.x.xx......---...x.....:.....xx..-------------------....:......:......:........:..x.:..xxx.x:x....x......... 34M3D19M19D56M 81/109 74.3% 109/94230402 0.0% 22/109 20.2% 54949570 NA +6851 chr4 + 190214555 95199368 95199367 95199537 170 ATAACTAGGATTTTGGTATTTCTGCATTATTAAAAGGCCATGAGGTGCAAGAAAGCCTCATCCATTATTCATGTTTGTTTCAGGCTAAGTGCTAGATCCCCAGATGCTGAG-AATTTATAAATGTCTATTTAGAAAGCATTGACCATGATACAAACTGCTCTTGAGTTGTT chr4 - 94230402 34048171 34048170 34048340 60182063 60182062 60182232 170 ATATCCTGAATCCTAAGATTTTTGCATTATTAAAGGGCCATAAGGTACGCTAG-GCTTCATTCGTTATTCATGTATTTTTAATGCTAAGTGCCAGCTCCCCAGAGATGGGGAAACATATAAATGCCTCTTTGTAAATAGTTGATAATGATAAAAGAAGCTTCTGGACTGTT ...x.:x.:..::.::x....:............:......:....:.:xx.:-..:....:.:..........x.x...x.x.........:..x........x::x.:.-..:x........:..x...:x...xx:....:x......x..:xx...::..:::.... 53M1D57M1I59M 118/169 69.8% 170/94230402 0.0% 2/169 1.2% 61151197 NA +3355 chr4 + 190214555 95227225 95227224 95227303 79 CTGCAGCCTCCACCTCTTGGGATCAAGCAATCCTCCCATCTCAGCCTCTCAAGTAGCTGGGACCACATATCTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCAC ..:.....:xx.x..::....x.....::x.:.x.xx:x........:............:..:...::--........ 69M2D8M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 77030099 NA +3180 chr4 + 190214555 95292182 95292181 95292247 66 TACATATATATATACACATATATATACATATATATACACACACACACACACACACATATATATATA chr4 - 94230402 8395805 8395804 8395870 85834533 85834532 85834598 66 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x.:..:...x....:..:...::x:.:..xx...................x...:.x..:x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 86896377 NA +3243 chr4 + 190214555 95292183 95292182 95292245 63 ACATATATATATACACATATATATACATATATATACACACACACACACACACACATATATATA chr4 - 94230402 8395808 8395807 8395870 85834533 85834532 85834595 63 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:...x..:.:.::...::x.....xx...:...............x.....x..:x... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 86896375 NA +3292 chr4 + 190214555 95292205 95292204 95292277 73 ATACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATAAATTTTTTTT chr4 - 94230402 66904847 66904846 66904919 27325484 27325483 27325556 73 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCT ...:..:..::..........:..............x..x:.x:.x:.:....:.xx:...::x....::.:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 28387358 NA +3054 chr4 + 190214555 95292217 95292216 95292260 44 ACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372750 87372749 87372793 6857610 6857609 6857653 44 ACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...........x..........x....::...:..::....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 7919467 NA +3059 chr4 + 190214555 95292220 95292219 95292300 81 CACACACACACACACACATATATATATATATATATATATATATATATAAATTTTTTTTGTTTTTTTTTGAGATGGAGTCTT chr4 - 94230402 60813611 60813610 60813691 33416712 33416711 33416792 81 CGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGTATCCATGAACTGTAGCATT .:....:..:::..x....:.:....:.x............:.....xx.x.x.:.x...x.x.::x...:x..x..:x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 34478609 NA +3079 chr4 + 190214555 95292231 95292230 95292284 54 ACACACATATATATATATATATATATATATATATATAAATTTTTTTTGTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .:.:.x..........:...::.:.:.:...:......x.:......x...... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 86610301 NA +3155 chr4 + 190214555 95292238 95292237 95292287 50 TATATATATATATATATATATATATATATAAATTTTTTTTGTTTTTTTTT chr4 - 94230402 92735348 92735347 92735397 1495006 1495005 1495055 50 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT .::....x.....:...:..:.:.......x.......:.:......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 2556890 NA +3060 chr4 + 190214555 95304556 95304555 95304601 46 ATATCTTTCTCTCTCTCTCTTTTTTTCCCCCTACTCTCTGATGTTT chr4 - 94230402 47469797 47469796 47469842 46760561 46760560 46760606 46 ATATTTTTCTCTTTCTCTCTTTTTTTTCCCCCCCTTTCTTATTTTT ....:.......:.............:....:x..:...x..x... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 47834759 NA +3452 chr4 + 190214555 95312031 95312030 95312094 64 AGTGAAATCCAATCTCAAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAACAAAAAAA chr4 - 94230402 18021876 18021875 18021939 76208464 76208463 76208527 64 AGTGGGAATGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAA ....::.x:x:...xx.....:x..............x...........x........:::... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 77290155 NA +3365 chr4 + 190214555 95312038 95312037 95312086 49 TCCAATCTCAAAAAACAAACAAACAAACAAAAACAACAACAACAAAAAA chr4 - 94230402 79230825 79230824 79230872 14999531 14999530 14999578 48 TTCAATCTTCAAAA-CAAACAAACAAACAATAACAACAACAACAAAAAA .:......:x....-...............x.................. 14M1D34M 44/48 91.7% 48/94230402 0.0% 1/48 2.1% 16081213 NA +3285 chr4 + 190214555 95312039 95312038 95312085 47 CCAATCTCAAAAAACAAACAAACAAACAAAAACAACAACAACAAAAA chr4 - 94230402 71645064 71645063 71645110 22585293 22585292 22585339 47 CCAAGATTAAAAAACAAACAAACAAACAAAATCAACAACAAAAAGAA ....xx.:.......................x.........x..:.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 23666975 NA +3006 chr4 + 190214555 95312048 95312047 95312086 39 AAAAACAAACAAACAAACAAAAACAACAACAACAAAAAA chr4 - 94230402 3417600 3417599 3417638 90812765 90812764 90812803 39 AAACACACACACACAAACAAAAACAACAACAACAAAAAA ...x...x...x........................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 91894448 NA +3296 chr4 + 190214555 95312049 95312048 95312099 51 AAAACAAACAAACAAACAAAAACAACAACAACAAAAAACAAAAAAAACCCC chr4 - 94230402 20093817 20093816 20093867 74136536 74136535 74136586 51 AAAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAACCCC ......................xxx.........x..xx.x.......... 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% 75218232 NA +3043 chr4 + 190214555 95328023 95328022 95328079 57 TCTGTCACAGGCAACTTCTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTAT chr4 - 94230402 90735782 90735781 90735838 3494565 3494564 3494621 57 TTTATTTCAGGAAATTTCTTTTTTTTTTTTTTTTTTCTGGATTCTTTTTGCTTCTGT .:.:.:x....x..:.....................:.::x..:.....x:..:.:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 4592241 NA +3507 chr4 + 190214555 95341459 95341458 95341608 150 GAGAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAAAGAAAGAAAGA------AAGAAAAAA-AGAAAAGAAAAAAGAAAAAGAAAGAAAGGAGGGAGGGAGAGAGGGAGGAAGGGAGGGGAGGAAGCAGAGCAAGATAG chr4 - 94230402 90814945 90814944 90815101 3415302 3415301 3415458 157 GGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGACAGCTCCAGAAAG .:....:...:...:.x::..x:.:xx.x.::...:...x:.........x.........:::.------.....::..-..:..xx:..x.:...x:x.....:..x::.:xx:...:x..:::.:...x:.::::.:::.::...xx.x...x.. 64M6I9M1I77M 88/150 58.7% 157/94230402 0.0% 7/150 4.7% 4526514 NA +4124 chr4 + 190214555 95341471 95341470 95341623 153 GAAGAAAGAGAGAGAAAGAAAGAAAGAAGA------AAGAGAGAGA---------AAGAAAGAAAGAAAGAAAAAAAGAAAAGAAAAAAGAAAAAGAAAGA---AAGGAGGGAGGGAGAGAGGGAGGAAGG---GAGGGGAGGAAGCAGAGCAAGATAGCCAAATGGAAGCCTT chr4 - 94230402 44053988 44053987 44054161 50176242 50176241 50176415 174 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAATCCATCTTGCCAGAAACAAACCTT ......x.:::..........::...:...------..x:.:...:---------.............::x.....x...x.x...:..x.:......x:.---..:::x..:x...x.:...:..:....---.x:.x...:x..x.:.x.x.xx.x....:.x:x..:.... 30M6I10M9I46M3I27M3I40M 104/153 68.0% 174/94230402 0.0% 21/153 13.7% 51287483 NA +3012 chr4 + 190214555 95380612 95380611 95380650 39 ATTTACCCAGAAAAGACAAAAAACAAAACAAAACAAAAA chr4 - 94230402 21291806 21291805 21291844 72938559 72938558 72938597 39 ATTTATGCAAAAAAAACAAAAAACAAAACAAAACAAAAA .....:x..:....:........................ 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 74088806 NA +3107 chr4 + 190214555 95383256 95383255 95383304 49 TGTGTTTACACACACACACACACACACACACACACTTATTTATTGTTAT chr4 - 94230402 60735424 60735423 60735472 33494931 33494930 33494979 49 TATGGTTGCACATGCACACGAACACACACACACACTTACTTATTTTTGT .:..x..:....::.....:x.................:.....x..:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 34647832 NA +3946 chr4 + 190214555 95392508 95392507 95392586 79 CTGCAGCCTTGAACTTCTGGACTCAAGCGAAACTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:x:.:.......::.....:.xxx.x.xx.x........:............:......--.:........ 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 77195382 NA +3617 chr4 + 190214555 95440834 95440833 95440906 73 AATACTTAACACTTACTGCTTACATCACAATTTTCATCTTCAATGTACTTTACAAACATTAAGTAATTTTTAT chr4 - 94230402 78472125 78472124 78472197 15758206 15758205 15758278 73 AAGACTTAATACTTGCTGCTTACATAGCATTTTGTATGTTCAGAGTCGTCTGCAAATACTAACTAATCTTTAT ..x......:....:..........x:..x...x:..x....:x..xx.:.:....:.:...x....:..... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 16968709 NA +3283 chr4 + 190214555 95448197 95448196 95448254 58 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982297 18982296 18982354 75248049 75248048 75248106 58 tctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x.x.x.x.x..............x.x...................::.. 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 76465900 NA +3419 chr4 + 190214555 95448197 95448196 95448246 50 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982305 18982304 18982354 75248049 75248048 75248098 50 tctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x..................x.x...............::.. 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 76465892 NA +3531 chr4 + 190214555 95448197 95448196 95448252 56 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982299 18982298 18982354 75248049 75248048 75248104 56 tctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x.x.x.x................x...................::.. 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 76465898 NA +3599 chr4 + 190214555 95448197 95448196 95448248 52 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982303 18982302 18982354 75248049 75248048 75248100 52 tctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x.x..................x.................::.. 52M 45/52 86.5% 52/94230402 0.0% 0/52 0.0% 76465894 NA +3779 chr4 + 190214555 95448197 95448196 95448250 54 TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982301 18982300 18982354 75248049 75248048 75248102 54 tctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....x.x.x.x.x....................................::.. 54M 47/54 87.0% 54/94230402 0.0% 0/54 0.0% 76465896 NA +3102 chr4 + 190214555 95448209 95448208 95448244 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 13819145 NA +3316 chr4 + 190214555 95448211 95448210 95448246 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 13819147 NA +3102 chr4 + 190214555 95448213 95448212 95448248 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 13819149 NA +3014 chr4 + 190214555 95453456 95453455 95453511 56 GGAGGAAAAGAAGAAGAAAAAGAAAAAAGAGAAAAGGAAGAAAAAAAAGAAAGAAA chr4 - 94230402 67066645 67066644 67066700 27163703 27163702 27163758 56 GGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAGTAGA ...:.:..:.......:....xx.....x.......:..:..x......:.:x.:. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 28386811 NA +3087 chr4 + 190214555 95489102 95489101 95489148 47 GGGGGAGGGGGAGAGGAGGAGGGAGGGAGGAGGGAAGGAAGAAAGAA chr4 - 94230402 56659770 56659769 56659816 37570587 37570586 37570633 47 GGGGCAGGGGAAAAGGGGGAGGGGGAGAGGAGGAAAAGAAGAAGTAA ....x.....:.:...:......:.:.......:..:......:x.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 38829332 NA +3076 chr4 + 190214555 95514627 95514626 95514678 52 TATATTTATTTATTTATTTTATATATATATATACATATATACACATATATAT chr4 - 94230402 6951630 6951629 6951681 87278722 87278721 87278773 52 TATAGTCAGCTATTTCTATCATATATATATACACATATACACACGTATGTAT ....x.:.x:.....x.x.:...........:.......:....:...:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 88562997 NA +3058 chr4 + 190214555 95520687 95520686 95520745 59 CTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::......x.:xx...x.xx.x........::.:................x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 77323548 NA +3015 chr4 + 190214555 95529303 95529302 95529371 69 TTTATATGTATATATGTGTATATATATTTATATGTATATATGTGTATATATATATTATATATATACATA chr4 - 94230402 50941866 50941865 50941934 43288469 43288468 43288537 69 TTTAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTA ....x..x.x.....:..:.:.x.:.:x......:..x...:::.:.......x..:x...:....:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 44587437 NA +3074 chr4 + 190214555 95550466 95550465 95550576 111 GCAGGAAACATGAGGTCTAATTTTGGCTGTGGTCATAACTACTCTGTTACCCTGGGTAAGTCAGGTAACCTGTGAATGTCTCAGTTTCTTCATTTGTGAAAT-ATTTTGATA chr4 - 94230402 11947179 11947178 11947285 82283118 82283117 82283224 107 GCAGGAGAC-TGGGGACT--TCTGAATTGTCCTCACTA--ACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA ......:..-..:..x..--.:.x:::...xx...:x.--...x...x...:.:...x.....xx...:...:xx:....:.......::...x.:......-...x.:... 9M1D8M2D18M2D62M1I9M 75/106 70.8% 107/94230402 0.0% 6/106 5.7% 83603287 NA +3364 chr4 + 190214555 95569933 95569932 95570006 74 CTGCAGTCTCAACTTCTTGGGCTCAAGTGATTCTTCCATTTCAGCCACTCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...:.:x..x:.::....:.......x...x:xx:x:......x:............:......x.::... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 77372807 NA +3004 chr4 + 190214555 95586209 95586208 95586266 58 TTTTCTTTTCTTTCTTTTTCTTTTTCCTTCTTTTCTTTTCTTTCTTCTTTCCAGGATC chr4 - 94230402 50001497 50001496 50001554 44228849 44228848 44228906 58 TCTTTTTTACATACTTTTTCTTTTCCCTTTTTTTTTTTTCCTTCCTATCTTCTGGTTC .:..:...x.x.x...........:....:....:.....:...:.x.:.:.x..x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 45584712 NA +3109 chr4 + 190214555 95606218 95606217 95606259 42 AAAAAGGTAGAAAAAGCAAAAACAAACAAACAAAAAAAAAAA chr4 - 94230402 44210627 44210626 44210668 50019735 50019734 50019776 42 AGAAAGGTAGAGAAGGCAAAAAAAAACAAACAAACAAAAAAA .:.........:..:.......x...........x....... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 51395591 NA +3037 chr4 + 190214555 95607141 95607140 95607191 51 CTTTTACATAACATGGTTTAGAAACAAAATTTTAGCTTGACACTGATGTAG chr4 - 94230402 36603399 36603398 36603449 57626954 57626953 57627004 51 CTTCCACACAATATGGTTGAGAAACAAAATTTTACTTAGTCATTGGTGTAG ...::...:..:......x...............x:.x.x..:..:..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 59003742 NA +3048 chr4 + 190214555 95621425 95621424 95621467 43 ATTATATACATATGTGTGTGTGTGTGTGCATATATATTCTTCT chr4 - 94230402 27034824 27034823 27034866 67195537 67195536 67195579 43 ATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTT ........:...................:.....:x..::.:. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 68586601 NA +3567 chr4 + 190214555 95656019 95656018 95656129 111 GAGTGAGTAGGTTTTTTATTACTGATTC-------AATTTCAGAACTCATGTTCGTCTGTTCAGGGTTTCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTAGACCAGTCTCATTCTATC chr4 - 94230402 59367098 59367097 59367211 34863192 34863191 34863305 114 GGATGGAAAGGATTTTTAATACAAATTTTGAGTGGAATTTTACAACCTATTT----CTATCAAGGAATTCAAGGTGTTTTTTGATTTTTTTTTTTTTTTAGCACAATCCCAATTGATC .::..::x...x......x...x:...:-------.....:.x...::..x.----..:.:x...:x......x.x......xx.................xx..:..:..x.:x... 28M7I17M4D62M 76/107 71.0% 114/94230402 0.0% 11/107 10.3% 36288921 NA +3146 chr4 + 190214555 95818225 95818224 95818281 57 ATTCAGCACAAACATGTAAGTACTAGAATAAATTCTTTTTTTCCTTTTTTTTTTTTT chr4 - 94230402 56286446 56286445 56286502 37943901 37943900 37943957 57 ATCTGGTACAACCATGTCACTACCTGAAAAAAGCCTTTTTTTCTTTTTTTTTTTTTT ..:::.:....x.....x.x...:x...x...x:.........:............. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 39531779 NA +4321 chr4 + 190214555 95904683 95904682 95904774 92 CACCACTCACTGTAGCCTCCACCTCTTGGGTTCAAATGATTCTCATGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCATGCACCACCATG chr4 - 94230402 18197117 18197116 18197206 76033197 76033196 76033286 90 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:x:x..::....:xx.x..::.........:..x...x..x.x........:............:.:....--.:........::.. 76M2D14M 66/90 73.3% 90/94230402 0.0% 2/90 2.2% 77707566 NA +5492 chr4 + 190214555 95992472 95992471 95992826 355 TTAACTAAAAATAAAATAATTATAAATGTCAATTGGAAGTAAGCAGTTACAGATATGAAATGCCAGTTTAGAAGCTACTGATATTTTTAAGGTGACATGT----ATCCTTACTTTATTCTTGCTTCAAACATCTGAGCTTTTATGCTCAGTCTTCATCAGTCTATGACATAGTTAAAAAACTCAGACTCTTAATTCACAATTTATACATAATTCAATTATATATTTTATTTGGCCAACTTTGGTCAACCACATATGACTTCTGGTACCATGGTATAGATTTTTCCATATTTCTACACTGCCACTAGATACATTCACCTAAATCAACTGTAAAGATATTTCATCCAAA-GTGGCTGTAAAA chr4 - 94230402 33656846 33656845 33657176 60573227 60573226 60573557 331 TTAGGTGGAAGTACACTAATTACAGGTGCCCACTCAATGAAACCAATTACTGGTGCAGACCATAATCTCAGAGGAAGGTAGTGGTTTTAAATAAATAAATTATCATTTTTACGTTTACTTTAATTAAAGAATCTAAGATTTCTTGCATCATCTCTA--ATCCCAT----TAGATTAACATCTGA-----------------TCAGACAAGAAT------TATTTTTTGTTTGGTCAAACTTGAGTAACCACACGTGACTTTCAGTAACTTGCTATGGATTTGTCAATATTTCACCATGAGCATAAAAGACATTCTCCTATATCAGCAGTTAGGTGGTTCCATTAACCTGAGGTTGTAAAA ...:x.::..:..x.x......:.::..:.x.:.x:.x.x..x..:....x.:.::::.x:::x.x:.:...:.xx:x.::.:x......:xx:.:.x:.----..::....x..xx::..:x..x..:x....:..x...:x...x:x:...::.--.x:.:..----...x.x..x.x..x.-----------------.:.x...x:.x.------...x....:.....:...x:...:x:.......::......:::...x.x..x...:.....x..x.......xx..:x:x..:x.:.x......x....x....:.x..x.:.xx:..:...:x.xx-.x..:....... 100M4I52M2D7M4D15M17D12M6D128M1I12M 197/326 60.4% 331/94230402 0.0% 34/326 10.4% 62335626 NA +5634 chr4 + 190214555 96002055 96002054 96002290 236 TAGAGATGATATAAA----CCCAAGAGGAAACCAGTGAC-ATTTTTCAAAATAAGT-----------GCAATGTGACTTTTTTTTTTAAATACAACATAAA---------AAAGGCTAAAGC------ATTCTTTTCTGTCTTGGCCCTTTCCTCTGCTTGATTGGTCATAAATGATGATGTAATTCATCATCTTCACTTCAGCTGTTAGGATTAAACCTTTCAGAAATGCTGACAGGACC---AGGAGGACATCTTTTCCCCTTTGTCT chr4 - 94230402 33658715 33658714 33658982 60571421 60571420 60571688 268 TATACAGGATGTAAAACATCTCAAAAGAGAATAACTGTCTGTCTCTTAAAGAAAGTAGCAGTTGCTGGCAATATTATGTTGCAAATTAAAAAAAAAAAAAAGGAAAAGGAAAAGGATCAAGCTAGACAGCACTTTCCTCTTACTGCCATTTCAT-TGCTCGATTGGTCAAAACTGACAGTGTGATTTATCATCTTCACTTCATCTGTTAGGGTTAAACCTTTCCAAAAAGCC-ACAGAACTGTAAAGGATGCAACTCTTAACCTCCTTCT ..x.x.x...:....----.:...:..::..:x.x..x.-:.:.:.:...:x....-----------.....:.x.:x..x:xxx.....x.x..x.x...---------.....x.x....------::x....:..x.:x:x...x....x.-....:.........x..x...:::...:...:...............x........:...........x:...x..:-....:..:---.:.::x:..x..:..xx...::x... 15M4I20M1I16M11I34M9I12M6I26M1D77M1D8M3I26M 162/234 69.2% 268/94230402 0.0% 36/234 15.4% 62343340 NA +3870 chr4 + 190214555 96012457 96012456 96012579 123 TAAAAAAAAAGAGAGAGAGAGAAGAGGAAATAAAAGAAAAGAAGGGAAGGGAAGGGAGAAAAGAAAAAGAAAGAGAGAAAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAA-GAGAGAAAGAAAG chr4 - 94230402 30533163 30533162 30533286 63697117 63697116 63697240 124 TAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ....x......::...:...:......::.x.:..::.xx.x::::...x:....xxx..:.x...:.xx:.:.x....::.x:.:....:.......:..x:xx:....-.....:..x.... 110M1I13M 78/123 63.4% 124/94230402 0.0% 1/123 0.8% 65479294 NA +3007 chr4 + 190214555 96012474 96012473 96012552 79 AGAGAAGAGGAAATAAAAGAAAAGAAGGGAAGGGAAGGGAGAAAAGAAAAAGAAAGAGAGAAAGAGAAAGAAAGAAAGA chr4 - 94230402 79555904 79555903 79555982 14674421 14674420 14674499 79 AGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAGAATGTAAGAAAGA ...:..:xx..::x..x:.::::.x.....::..:..:.............:...:..x.xxxx....x.x........ 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 16456570 NA +3211 chr4 + 190214555 96012503 96012502 96012625 123 AAGGGAAGGGAGAAAAG-----AAAAAGAAAGAGAGAAAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAA-GCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAG-AAGAGAGAA .:..:...:..x.x..:-----:..:.x.....:.:x.......:...-.x..x...x.........x.::x..:.::x..:.:::...x.....xxx.x.:.....:.x.x:x:...-....:.... 17M5I26M1D69M1D9M 80/121 66.1% 126/94230402 0.0% 7/121 5.8% 50657091 NA +3635 chr4 + 190214555 96012534 96012533 96012647 114 AAAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAGA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAA chr4 - 94230402 30533164 30533163 30533281 63697122 63697121 63697239 118 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAA ...x.:....:........:.::.:.::...:.:...----....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.:::... 37M4I77M 71/114 62.3% 118/94230402 0.0% 4/114 3.5% 65479370 NA +3066 chr4 + 190214555 96012542 96012541 96012624 83 AGAAAGAAAGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx.:x.....x...::.............:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 59154248 NA +3439 chr4 + 190214555 96012542 96012541 96012656 115 AGAAAGAAAGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AGAAAGGGAGGGA chr4 - 94230402 30533164 30533163 30533280 63697123 63697122 63697239 117 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGA .:.x.:....::.........::.:.:....:.:.:.xx:x....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:--:......:::... 102M2I13M 70/115 60.9% 117/94230402 0.0% 2/115 1.7% 65479378 NA +3319 chr4 + 190214555 96012546 96012545 96012628 83 AGAAAGAGAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x..xx..x.....x...:....:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 59154252 NA +3288 chr4 + 190214555 96012562 96012561 96012645 84 AGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 59154268 NA +3045 chr4 + 190214555 96012567 96012566 96012649 83 GAGAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ....:.x..--..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.....:.... 9M2I74M 55/83 66.3% 85/94230402 0.0% 2/83 2.4% 59154274 NA +12284 chr4 + 190214555 96018566 96018565 96018913 348 AAAGTGAAAGCTTTTCTTAT-TGTCTGAAAGGAAAGATAGCATAT--TCTGAAAGGCAGAGT-AGTATGTTGGCATTGTACCGACTGACTATGCATTAGATCAGACAGCAAATTAGATATTGATAGAACTATTTTGGACAGTCAATAAGCTTTCTGATGATTGATATCTTTACACTG--CCTGGTAATATCAGTGCCAGCATTTAGAAACTAGACAAAGAAGCTGTAATATAATATTCTTTTTGTGGAATCCTTAAGTGTAATCTAAACTGAAAAGTCTCATTACTTAGATAGCAGGATTTACA--GAGCTGACTTTCTCAGGAACAAGGGAAAGAAAATTAAAACATCATCCATT chr4 - 94230402 33663537 33663536 33663879 60566524 60566523 60566866 343 AAAATATAAGTCTCTCACAAATGCTTGTAAGAAATCATGTTTTATCATTTGAAAGATGGAGTCATTGCATTGGCATCAGA------GCCTATGCATTAGATCAGACAGCAAATGAGATATTGATAGAACTATTTTGAACACTCAATAAGCTTTCCAATGATTGATGGCTTTGAGCTGACTCTGGTAATATCCATGTCTGCACTTGGAAACTAGAGATTGAAACTGTAATGCAATATTCTCTTTGTGGAATTCATAAACATAACTCAAATTTAGG----CAGTGGCTCCAGGAGCAGAATTTGCATGGAGCT--CTTTCTTCATAGTAAAAGACA-AGAATGACAACAATTTTCACT ...:.:x...::.:..x:.x-..::..x...:..xx..:x:x...--.:......:::....-.x.:::.......::x.------.x.........................x......................:...x.............::.........:x....:x:...--:...........x:..:.x...:..:.........x.xx...:.......::........:..........:.x...:::...:::...:.x.::----:x:.x:..:x::x.....:....:..--.....--......:x:x.::..::..x.-.:...x.x....x:x.:..:. 20M1I24M2I15M1I17M6D91M2I95M4D26M2I5M2D21M1D21M 239/335 71.3% 343/94230402 0.0% 21/335 6.3% 62355029 NA +3097 chr4 + 190214555 96049381 96049380 96049438 58 GCAAAAAAAAACAAAAAAAAATTTCAGATTAAAAAATGGGAAAAAGATCTGAATAGAC chr4 - 94230402 18777067 18777066 18777124 75453279 75453278 75453336 58 GCAAAAAAAAAAAAAAAAAAATCATTTACTTAGAAATGGGAGAAGAATGTGAATAAAC ...........x..........:x:xx.:.x.:........:..::..x......:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 77272314 NA +3071 chr4 + 190214555 96051761 96051760 96051830 70 TTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACTTTCTTTTCTTTTGTTTCTTTCCTTTTCTTT chr4 - 94230402 32864850 32864849 32864919 61365484 61365483 61365553 70 TTTCTTTCCCTTCCTACTTTCTTGTTCACATGTTTTCACTTTTTTTTTAATTGTAGTTATCCCTGTCTTT .........:...:.x.......x:.:x.x.x:.........:....:xx....xx:.x...:.x..... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 63186911 NA +3357 chr4 + 190214555 96126662 96126661 96126910 249 AAAGAAAATGGGAAAGGAGAAAGAAAAGGGAAGAAAGAGAAAAAGGAAGAGGAAGAGTT----AGAAAAAGAGATAAAATGAGAATGCATTGGTCTCGAGCCTTTTCATGCATAAGTTTTTCAATTCTTGTCTTTTACAAATTTATTATTCAGTTCTATAATTGTTTAATGTCCTTATTTCTTAGGTACCCAACTAAATGATATGACTCCTTTAGTTAAATTTTTGTTTGCTCTGTAAAATATTATCAATAAA chr4 - 94230402 7739261 7739260 7739481 86490922 86490921 86491142 221 AGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAACATATT-GTTTCAACATCTTGGAAACAAAA-----TGGATTGTTTTCTTTCTCAAA-------------TACAAAAGTGTTTCATTTCAACATCTT-------CACATTTGTATCTCAAAACAGCTTT------TTTTTTGTTTGTTTTAAAAAAGAATATAAATTAA .::.....xx:..::..:.:::.....:::.............x.x.:....:::.x..----.:.....:.:.x.....x::..:::...-..:..:.xx::..xx.x:..x..-----.x:...x..x.....:x....-------------.x:.x..x.....x..x..xx:..:.:-------.x..x:.:x..xx:.x:..xx....------x..........:.:.:x....x.x...x...x.. 59M4I28M1D23M5D21M13D27M7D25M6D34M 137/217 63.1% 221/94230402 0.0% 36/217 16.6% 88387401 NA +3074 chr4 + 190214555 96129215 96129214 96129262 48 CATTTACATGAAGATTTTTTATGTCTGATCTTTTTTTTTTTTTTTTTT chr4 - 94230402 3335115 3335114 3335162 90895241 90895240 90895288 48 CGTTTACATGGACAATTCTAATCTCTGATCCTTTTTTTTTTTTTTTTT .:........:.x.x..:.x..x.......:................. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 92794100 NA +3006 chr4 + 190214555 96163412 96163411 96163482 71 TAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATAAATACACACACATATACATGTATACATAATA chr4 - 94230402 47095159 47095158 47095229 47135174 47135173 47135244 71 TAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACAGCA ..........:..........:::::::.:::.:........:xx.:x..::.:..::::......:.::. 71M 44/71 62.0% 71/94230402 0.0% 0/71 0.0% 49068253 NA +3152 chr4 + 190214555 96182556 96182555 96182619 64 CTTACTGTGTGACTTGGGGCAAGTCACTTAACATTTCTGTGCTTCAGTTTTCACACATGTAAAA chr4 - 94230402 11947211 11947210 11947274 82283129 82283128 82283192 64 CTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAA ..x..........:.x:..:x..........:x.x:.....:::......:.x..::.:.:... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 84235345 NA +3106 chr4 + 190214555 96200819 96200818 96200865 47 TATTTTATACTCCTTTACCTTTGCTTTTTTTTTCTTTTTGCTTTTTC chr4 - 94230402 40193324 40193323 40193370 54037033 54037032 54037079 47 TATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTC ...:..x.......:x.....::..........:.....x....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 56007495 NA +12790 chr4 + 190214555 96262876 96262875 96263473 598 TATTTCCATATGTAAGAGAAAAGTAAAC-----TTTCCCAGTTCCTC--AAAATGTTTCTTTAAAG---ACTTTATGGTCTTAAGAGAATTGTTTGGCCTGAGTACAAATACCACCAAGCTTTTATTAAAGTGCCTTTTACACTGTAGTATTTT-----AATGTAATCAGGACAGAAGTCAAGATATAGAGACTAGTAAATAACTTAATGTCTTACAGTGGATCTCTGCTGTGATTGCATATAATCTCAATTATTATATGTCCAGCAGATGGATGCTTAGATAGTTGGATAAAACTTCTATTTGAACAGCTTTTGAAAAAAAAAAAACCTCAAATATCAGAGAACATTTCTTCTTTTGTCATTTATTTC--CCATGAAATTACTGAA----ATAACCTGGGA------------TCTAATTGCAAAGATTCAAATTCATTTAAAACATACTAATTAAGAGGTAGTCATAATG----CCTTTTAACTGTTTCCATTTACTCTCCCTTAATTT----TATAATTACAAA--AATAACACTGAGTGCAGTGAATATAAAA-CTAACTGCAGAACTTCTCAGGATAATCTTCAAGGCTTTTAGCAGC-CTTTAGCCATATGGGTTTTGCATAT------------ATGGTTCCAAAATG chr4 - 94230402 33529680 33529679 33530320 60700083 60700082 60700723 641 TAACTCCTTATAAGACCAAAAAGTAAACAACCTCTTTCCAATGCCTTTTGGAACATTTCTGTAAGGGACAACACATTCTATTAAGCCA---TCTTGGCAGAGGCATAGATATTGTTGAGCACTTATTAAAGTGACTCCTACATCGCTATAGCTCTGCAAAATCTAATTAGAATGGAAGCCAATGTATATAGCCTTATAAATAAAATAAAGTCTTGCAGTAGAGACCTGCTGTCTTTGCACATAATCAGAGTGATCATCCATAGAGTAGATGGCTATTCAGCCAGTTGGCTAAGAGTTACATT-----ATATTTTCAGTTATAAAAATGGCTGAGTGTTTGTAAAAA--TCTTTTTAAATCACTCATTTCCACCATGAACTTGCCCAGTACCATAACTTTAAAGGCTGTTTATTGGCAAATTGAAGAGATCAAAATGAAAATCAAACTGGCTAATTAAGAAGCTGTTGCAATAACACCTTTTTATCTGTTTCCATTTAATATTCCTTGATTTTTACTATACTGAAAAGGTAATGACAC----TTCATTGAACATAAAGCCTAACTGCTCTGCAGCTTTGAATAGTCTTCCAGACATTTaacagctttttatccgtatggacaatacatataggacaaggggaatggttttaaactg ..x:...x...:x:.xx:..........-----:..:...:.x...:--::..::.....x...:.---.x:x:..xx.x.....xx.---x:.....xx::.:.:.:...::::::...x:...........x..::....::.:x:..x:.:-----...x....:..:.::....:...x:....x..x..x:.......xx...x.....:....:..xx:.......xx.....:......xx.:.x..:..x::.xx..:......x.::.:..x:......x...:.x..x:...-----.xx....x.:xx.x.....xxx:::.:.:.:x.x:..x.--....:..xx:...:.:.....--.......x..:.:x.:----.....:.x::.------------x.x.....x.:....:x....xx.xx.x....xx:..........:.:x..:::...:----.:.....x.............x.x.:....:....----....x.x.x..:--...:....----.x..x....:.....:-........xxx:.xx..:x.:...:.....x..:.x....:....-:....x..:.....::xx.:.....------------......::...x.. 28M5I14M2I17M3I19M3D63M5I143M5D39M2D21M2I16M4I11M12I58M4I35M4I12M2I8M4D16M1I45M1I25M12I14M 386/584 66.1% 641/94230402 0.0% 71/584 12.2% 62733196 NA +12940 chr4 + 190214555 96264933 96264932 96265446 514 TTTATTTCATTTTAAAAGAAAACAACATTTTCAAATAACTACACATGAGATTTTTAATGATTAAATTGTCTGTCATAATTCTTGACCCTAGTCAGTAAGACACAATAATTAATGAATAAGTTAGTTGCTTTTAATGTTCC-CAGTTTAGTGATATACAACTTACAGTGTCTCGGAATCTTTTAGAGTTATGTCTAGATGAGCAGGCATCTGATATATTGCTTCTTTGGTAAGAGTATAATAGCTAAAGAACAATTACTAGCTTTGTGAGGATGGCATTTTATCAATGGAACTTCCATTAAGTTAGCCTTCCATCTTGTTAATGCCATGCTCTTTTTTCAGGACCTTGACATCATTATAATGTGTCAGTATAGGGGGGGATAATGTACTTTTAAAGTGCCGTAGATATAAATGTGTATTCCTGTCTTTGGTAAATTAGCATTCAAAG---CTTTCTTGCTGCAGTCATTTTAAGGACTACATGAGAATACTAAATACATG-AGATATAAAAAGTATATCA chr4 - 94230402 33533281 33533280 33533732 60696671 60696670 60697122 452 TTTTTTTCATTTTGAGAGTA--TAATATATTGAGTT--TTACTAAAAATATTTTAAAGTGTAAAA--GCCTGTCATAATTCTTGCCTGCAGTCAATGAATTACAATAATTAAT----AGGTTAGTCACTTCTCATGTGACACAGATTACTGATAAACAACTTGTAGT--------------------TATGCCCACATGAGCAAGCACCTGAGGCATT--------------AGTGTA------------CAATTATTTGCTTTTTGAGATTGGCATTTCACCAATGAAAATTCCATTAAGCTAGACTT--GTCTTGCTAATGTCATGGTCTTCTTTTAGGATACTGCCATCATTACTGTATGCTGCTGAAAAAGAAATCACTGATGTTTTCAAATACCAGAGGAATAAATATGTATTTCTAGTGATGATAATTTAGCATTCAAAATATTTTTCTCCTCACAAG-ACCTTGATCTCTTCATAAG--------ATATGTGAAGATATAAACAGAATGTCA ...x.........:.:..x.--:..:..x..x.:x.--:...xx.x:.x.....x..xx:.x...--.:...............x.:x:.....:.:.:x:............----.:......::...:.x....xx.-...x...x.....x.......::...--------------------....:.:.x.......:...:....x::...--------------...:..------------......:.x.....x....:x........:.:.....:..x..........:...x...--:.....:.....:....x....:...:....:x:..x........:x:.:..:::x.:x.:::.:::x:.x..xxx....x..:.:..:x..:x......:......:..:x:xx..:...x............:---:.....:x:::..:x-.::..:.xxx..x...:..--------...::..-.........x..x..:... 20M2D14M2D27M2D46M4D23M1I26M20D31M14D6M12D59M2D135M3I15M1D19M8D7M1I19M 314/447 70.2% 452/94230402 0.0% 72/447 16.1% 62731652 NA +3035 chr4 + 190214555 96276266 96276265 96276318 53 ACGCGCACACACGTGCATGCACACACACACACGCACACACACACACACACACA chr4 - 94230402 89016082 89016081 89016134 5214269 5214268 5214321 53 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCA .:.:.......:x...............::x:..:........::..x.::.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 7260184 NA +3146 chr4 + 190214555 96369322 96369321 96369393 72 TTCTTTTACCATTATATAGTGACGTTCTTTGTCTTTTTTTTTACTGCTACTGAAGTCTGTTTTATCTAAAAC chr4 - 94230402 50056802 50056801 50056868 44173535 44173534 44173601 67 TCCTCTTACCAT-----AGTGATCTTCACTGTTTTTTTTTTTACTGCTGTTGTGGTCTATATTACACAAAGC .:..:.......-----.....:x...x:...:...............::..x:....:.x...:x:...:. 12M5D55M 50/67 74.6% 67/94230402 0.0% 5/67 7.5% 46312520 NA +3300 chr4 + 190214555 96452542 96452541 96452611 70 TCTTTATCTTTTTTGATCTTTGTTTTCTTTTTCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTCTG chr4 - 94230402 59946243 59946242 59946312 34284091 34284090 34284160 70 TCTTGATCTCTTCTAACCTTGATTCTGTGATTTCTTCCTCTTCTTTTTTTTTTTTTTTTTGACTCATCTG ....x....:..:.:.:...x:..:.x.xx..::...:.......:..............xx:.:x.... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 36506299 NA +3707 chr4 + 190214555 96452668 96452667 96452742 75 CTGCAGCCTCTGTCTCCTAGGTTCAAACATTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.....:xx:x..:..:.......::::...x.xx.x........::::.........:......x....... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 78255542 NA +3113 chr4 + 190214555 96458299 96458298 96458358 60 AAAAAAAAAAAAAAAAGAAAGGAAAGGCACAGAAGTTACAAAAGCTAAAAATAATTTTGA chr4 - 94230402 36762579 36762578 36762638 57467765 57467764 57467824 60 AAAAAAAAAAAAAAAAGAAAGGGAAAATACAGAAATTTCAAACCATTAACATGCTTATGA ......................:..:::......:..x....xxx.x..x..:x..x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 59695720 NA +3032 chr4 + 190214555 96479430 96479429 96479485 56 CTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGGGAGCATTTACCCA chr4 - 94230402 79738102 79738101 79738157 14492246 14492245 14492301 56 CTTAAAAATACAAAAAAAAAAAAAAAAACCACAAACAGAAAACATGCATTTACCCA ........x.x.................xx.x...x....x:x:x........... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 16741328 NA +3022 chr4 + 190214555 96502951 96502950 96503020 70 GCTTTCAAGACTCTTTTTATTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAGGTCTCACTCTGTT chr4 - 94230402 35978786 35978785 35978855 58251548 58251547 58251617 70 GCTACTAACAATCTCTCTATTGTACTTTTTTTTTTTTTTTTTTTCAGTTAAAAGAGGTTTCTACTCTGTT ...x::..x.x...:.:....x......................:xx..xxx.x.:.x.:::........ 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 60524165 NA +3083 chr4 + 190214555 96557726 96557725 96557769 44 TGTGTGTATATATATACACACACACACACACACACACACATATT chr4 - 94230402 66904840 66904839 66904883 27325520 27325519 27325563 44 TGTTTTCATATATGTACGTACACACACATACACACACACATATT ...x.x:......:...::.........:............... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 29652886 NA +3131 chr4 + 190214555 96568688 96568687 96568755 68 GTATATGCGTATGTGTATGTAT--CTGTATATGTATGTGTGTATGTATGTATACATATATACATATACAG chr4 - 94230402 51294134 51294133 51294203 42936200 42936199 42936269 70 GCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATAAAG .:..........x...:..:.:--...:..........:x........:..:.:::..x:.x.x...x.. 22M2I46M 50/68 73.5% 70/94230402 0.0% 2/68 2.9% 45274554 NA +5016 chr4 + 190214555 96593072 96593071 96593241 170 ATTAGTCTTTCTTTCTTTCTTTCTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--------------------TTCTTTTCTTTTCTTTCTTTGTCTCCC-------TCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTTCT chr4 - 94230402 88451651 88451650 88451847 5778556 5778555 5778752 197 ATTAGCTTTTCTGTAATAGGTGTGCTTACTTCTCTCTCATTTCTGTCTTTCTCCATCCCTTCTCTTCTATTCTTATTTATTTATTTTTCCTTCAACCAGCATATGACCACCATTCTTTTTCCACATTTCATCTCTTCTCATAAATATTTCTTTCATCCTTTTTCATCCttttttttttttttttttttttttttttt .....::.....x.xx.xxx.x:x...x.:.:...:........x.......::x.::...:::....x.::..x...x...x...:.:::.--------------------.......:::x:x....x.:x::..:.-------.:...:..x::..:....x.:....:.....:...:...:.........:. 92M20I27M7I51M 111/170 65.3% 197/94230402 0.0% 27/170 15.9% 8141421 NA +4261 chr4 + 190214555 96593074 96593073 96593225 152 TAGTCTTTCTTTCTTTCTTT-CTCTTTCCTTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTT chr4 - 94230402 45185606 45185605 45185750 49044653 49044652 49044797 145 TAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC---CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT-----AACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ......:xx...::.x...:-:......:............:.:x.:..::..........xx:....:.---......:x...xx.x::.:..x:.x...x.......-----xx..x.:.::xx.....:x......::.::..xx..... 20M1I49M3D36M5D39M 97/144 67.4% 145/94230402 0.0% 9/144 6.2% 51407468 NA +3381 chr4 + 190214555 96593087 96593086 96593195 109 TTTCTTTCTCTTTCCTTTCTTTCA------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCT chr4 - 94230402 23468159 23468158 23468273 70762130 70762129 70762244 115 TTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ...:...:.:........::....------.x.:x.:....xx...x..:..::.:.x.....xxxx.:::.x.:x......x:.::...x........:x..:.:...::.:.. 24M6I85M 70/109 64.2% 115/94230402 0.0% 6/109 5.5% 73124928 NA +3685 chr4 + 190214555 96593099 96593098 96593213 115 TCCTTTCTTTCAT---------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:...:.....---------.x..x..::..:..:.:::...:.....:..x::..::x.x.:::x:..:xx....xxx...:.x.......x....:........x.xx..::........ 13M9I102M 75/115 65.2% 124/94230402 0.0% 9/115 7.8% 53511198 NA +3384 chr4 + 190214555 96593108 96593107 96593231 124 TCATTTCTTTCTTTCTTTCTTTCT--------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCT chr4 - 94230402 45185583 45185582 45185711 49044692 49044691 49044820 129 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTT---TCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT .:...x..:x:....::....:..--------..:.:.x:...x..........---......x..:..:x.:......::..:x.:xx.:::..:..:....x...xx.x::.:..x:.x::.x....... 24M8I22M3D75M 78/121 64.5% 129/94230402 0.0% 11/121 9.1% 51407525 NA +3520 chr4 + 190214555 96593109 96593108 96593217 109 CATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCT chr4 - 94230402 49363790 49363789 49363897 44866506 44866505 44866613 108 CATTTCATTTCTTCTTTCTTCCCCCTCCTTTGTCATTTTTTCTGTATTATTCTATTTCTTTCCTAGTTATTTGCTGTCCCTGTTTTTCTTTGTC-CTGTATGTCTTTCT ......x..::.........:.::::::.:.x..x..:.....x.x..x:.:.x.......:..xx.:x..:x:....:.:x.:.:...:.x..-..x.x.x....... 94M1D14M 70/108 64.8% 108/94230402 0.0% 1/108 0.9% 47229319 NA +3492 chr4 + 190214555 96593116 96593115 96593241 126 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTT-TCTTTCTTTCTTTTTCTTTCTTTCT--TTTTTTTTCT chr4 - 94230402 45185583 45185582 45185711 49044692 49044691 49044820 129 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x...............:x...:.:xx::.:.:...:...:.xx.....-:......:x...xx.x:....:x..--..x.:..... 91M1I25M2I10M 81/126 64.3% 129/94230402 0.0% 3/126 2.4% 51407533 NA +3045 chr4 + 190214555 96593168 96593167 96593219 52 TTTCTTTTCTTTCTTTGTCTCCCTCTCTCTCTCTCTCTTTCTTTCTTTCTTT chr4 - 94230402 49339959 49339958 49340010 44890393 44890392 44890444 52 TTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ........:xx.x.x.x.....:.............:...:...:....:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 47253209 NA +3765 chr4 + 190214555 96636684 96636683 96636766 83 CCACAACCTCCACCTCCCATGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTAGAATTACAGGTGCACGCCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG .:...:..:xx.x..:.::x.........x...x.xx.x........::.:.......:...:....x.....--........ 73M2D8M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 78439558 NA +4384 chr4 + 190214555 96648369 96648368 96648518 150 AAGAAAAGAAAAGAAAGAAAGAAAGAAGA-AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGGAAGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAAGAATTAGGAGAAAAAAT chr4 - 94230402 44053989 44053988 44054138 50176265 50176264 50176414 150 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGA--TAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAAT .....x:..::.........::...:...-......:x::.:.:.x::.xxxx:.............::x..:..x...-.x......x:...::..x:.x.x...::x..:x...--x..:.:.......:.:..x.x.::..x.:..... 29M1I49M1I36M2D34M 97/148 65.5% 150/94230402 0.0% 4/148 2.7% 52594380 NA +3015 chr4 + 190214555 96648399 96648398 96648479 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGGAAAGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::.....:..x...:.x:.:.:...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 59790105 NA +3295 chr4 + 190214555 96648419 96648418 96648502 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........::x..x.:xx..:.::.......:.:x...:.x:.:.:..::..... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 59790125 NA +3109 chr4 + 190214555 96648423 96648422 96648508 86 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGA--AAGAAAGAAAAGAATTAG chr4 - 94230402 36858294 36858293 36858381 57372022 57372021 57372109 88 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAG .....x.:xx..x.....x...::...:......:..:.x..x.:xx....:::......:.:x...:--......::...:.:::.. 68M2I18M 57/86 66.3% 88/94230402 0.0% 2/86 2.3% 59790129 NA +3141 chr4 + 190214555 96659839 96659838 96659906 68 ATCACTTATTATTTGCTTTCGTGGTTTTTTTTTTTT-TTTTTTTTTTTTTTTTTTTTTTTTTTGGTGAG chr4 - 94230402 48640816 48640815 48640884 45589519 45589518 45589587 69 ATTTCTTATTCTCAGATTTGGTGGTTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTTCCTGTGGTAAG ..:x......x.:x.x...x.........x......-x.....xx.............::.x....:.. 36M1I32M 53/68 77.9% 69/94230402 0.0% 1/68 1.5% 48019023 NA +3248 chr4 + 190214555 96668248 96668247 96668326 79 TGTAGAAATCAATACAAACATATATATATATATGTGTGTATGTGTGTGTGTGTGTGTCTGTATAT--GTGCCTCTGTATCT chr4 - 94230402 19704267 19704266 19704347 74526056 74526055 74526136 81 TGAAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCT ..x..x....x.x.:.x.:.....::.......x.........x::...........x..x..x.--...::.:.xx.... 65M2I14M 58/79 73.4% 81/94230402 0.0% 2/79 2.5% 76963981 NA +6802 chr4 + 190214555 96670596 96670595 96670774 179 CAGTGCTCCTTTTTAAGTTCCTAAAAGATTAGAATTGCAGTGCAACTGC-CCCTGTCATTTATGTCTCACTTTTATGTGTTGCTGCTTTTATGGAGTGCTAAATTGCTTAATTAAATTTTACTGGTTTATTCTGCTTGCTCATTCATATCCTACTTAATCCAGCCTACGACATTTTCTTC chr4 - 94230402 33378955 33378954 33379121 60851282 60851281 60851448 167 CAGTGTCCCTTTAAGTCTTACTGACACACTGGGACTG----GGAACTGCACCCTGTGGTTTGCATTACTTTTTTATGTGTTCCTGTTTTTATGGAGTGCTAAATGGCTTAATTACATTTTACTAGTTTATTCTGTTCA-TAATTCA--------TTAACCTGGCACACACTATTTTCTTC .....::.....xx:xx..x..:.x.x.:.:.:.:..----.x......-......x:...:::.:x.x:...........x...:..................x.........x........:..........:.::-.x.....--------....:.::..x:..:x:......... 37M4D8M1I88M1D7M8D26M 124/166 74.7% 167/94230402 0.0% 14/166 8.4% 63291641 NA +3268 chr4 + 190214555 96673136 96673135 96673216 81 TTTATAGATACACATACATATATACATTTATATATATATATGTGTGTATATATAAATAAATCATTATATATATATAAATAA chr4 - 94230402 71926794 71926793 71926873 22303530 22303529 22303609 80 TTTATAAATA-GCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAA ......:...-:..xx:.......:x.x.:::..:...:.x:...x.:...............x.:....x.::..x.... 10M1D70M 57/80 71.2% 80/94230402 0.0% 1/80 1.2% 24746342 NA +8424 chr4 + 190214555 96681406 96681405 96681765 360 TATTGCTACATATGTCCTCTGATACTCTGGGATTATCACTTAATTAACTTGGTATAAATAGACTGAACAAGTGGTGTAAATCCCAGTAGACACAACACTTAGAATTCTATAATGGATCTCAAAAGAAATCCTAGAAAATGAACTAACAAGAAATAGAGAAGT------GACACATGTTTCAGATCAGAATCTGAGTTTATAATAAACACATTTTAATTTTTCTGCACATCTTTTTCAGCGCGGGTTGGCACATTTAAAAGTTATAAATAGAAAGACAGACA---TCCATTGAACTATTATAGGACCTTCTTCATGCTTCTTAGTTTGGGGAAATATTAAAGGATTAGAGATTAATTTAAATTCCAGATG chr4 - 94230402 33383166 33383165 33383517 60846886 60846885 60847237 352 TGTTATTTCACATGTGCCCTGATACTTTAGGATTATCACTTAATTAGCTAAATATAAATAGAGCAAGCAATTGGTGGAAGTCCCACTGGAGATAGCGCTTGG--CTCCATGATAGACCCCAAAAGAAAGCCTGG---------CAACAGGAAAAAGACAGCTCTAACAGCCACCTGCTTTGGATCTG-GCATGAATAGATGGACAGAGGCTTTTAGTCTCTTTCAGGATGCTACCCTGCACAGTGGGGTA---TTAAAAACAGCAGCTGTGGTGTCA-ACATGGTTCTTTGGAGTGCTTTCAAACCTTATTTCTTCTCCTCAGATTGGGTAAAT-TTCAGAAATTATAGATTAATTTCAAGTCTGGGTG .:..::.x..:....x.:........:.:.................:..x::..........x::.:...x.....x..:.....x.:..x.:.:.:...:.--:..:..:..:..:.:.........x...:.---------:....:....x...x.:x.------.x...x..:..::....x.-::x...:.xx..::xx.:x:xx.....:.:.:.:.xx:x..x:.x::.x..:.:.xxx..:.---......::x::.:x.:x::x.x..-...---.:.x...:.x.::.x.x::.....x..:x.x..:..:..x.....x....-..x.:::....x..........x..x..::.:.. 102M2D30M9D19M6I19M1D62M3D24M1D3M3I50M1D34M 220/343 64.1% 352/94230402 0.0% 26/343 7.6% 63298240 NA +40920 chr4 + 190214555 96691364 96691363 96692441 1078 CTTTGTGAGTCCAAGAGTCTTATTTTAGAGAGCAAACCTACAAAGT-CAAATGATCA---AAAGAGTCAAAGCTTCTCTGACAGAAACAAATGTGGTTCAAGCATTACTAAACATATATG-CTG-TAATGAAAATGTCTTTTTATAATACACTTT------CCCACTCTCAGCTGTGAATTTCCATGGGAATTATTTCCAAAGACAAGCTGCAGGGAAAGCATCAATTAATCTGCTGAATGAATTTTTGAATCTATTCTCAATGCTG-----------AGACCCCCTCCTGGTGCTTGGTAATTACCCCAATATTTTCTGCACGCTTGTTTAAACGGCTTCCTCTTGGGCTTCCTGTGAAGAAGGCCCCTCTCTCTGCTGATCTGA-----------AAGGCAATGTGCCTTATCGTTCTGCCTCATTCCATCTGCAGCTCATAGGGGGTCTCGCTAATCATTGTCATTGGAACATTGGATGAGCAGTCTGGGG-ACATAGATAGATGCGACACCAAAGGGGACCATGGACTTTCCAACAGAGTGCTCATCTTCATAAATGCATCAT-CCCTCCCAGATTCAAAG-CAAGAGATGAACTCCTTTAAAGCAAGGACCTGCACCTTAATTATACAAATGCAGTGATCAAAGTTATTAGCACTCTTTTCAAAAGCCAGGGATTTAATAGAATGGTGTTTTGTTACTTTTGACAGAAAATATTCGGTCCTCATGAAGAGCAAAAGT-------------AACAGAGAAAAACACAATAGGGAGAGAAATAAAGCAAGAGGAAAATGAAAATGGTGTTAAACAAAAAATGGTATTTACAGAGAAATACAATTCAAAAAGCAGTTGGTGCCATAAAAAAGAT--------AAAAGTTGTGAAGTGTTGGGCTGTAAGAGAACTTCTAAGTGTATTCAAATATGACATATTTTTTATTTTTCTTA----CCTCAAGTAGTAAG--TTTCAAAAGATAAATGTGATCCAC-AATTTATCCACACATGATTCATCTATAGACA--GAAAATAAAGCACAGTGAGGTTTTTTCATATGAAAGAATCCTTACACTGGAAATACTTATCTTT-TATCTTAAATAAAGATGACTTTCATACTTTTGGCGATTGTGACAT chr4 - 94230402 33385621 33385620 33386747 60843656 60843655 60844782 1127 CTTTGTGGGTTTGA---TCTTATTATAGAAAACAAATTTACCAAGCATGAATTACCACTGAAATTCTTAATGCTTTGGCAAAGAAGAAAAGTCAGATATGGATGCTGGCAAACGCGCATGGCTGCTAGCGAGAATGCCTCTCCTCTGCACACTTTTGTCTCCCAACTTTCAGCTAGGAGCTGCTGTGCGAATTATTTCAAAAGATGGGCTGCAGAAAAAGGATCAATTAATCTGCCGAGAGAATTTCAGAATCCATTCTCAATGCCGCTGATAGCCGGAGACCCCCTCCCTGCGCTTGGTAATTACCCCAATATTTCCTGCACGCTTGTTTAAACGGCTTACACTCGGGCTGCCTGTGAAGAAGAGCTCTCCGTCCGCTGATCTGAGGCAGGGGAGAAAGGCAGCTCTCCTTATCGCTCTGCTTCACTCCATCTGCAGCCAGCGGGGGGGCCGCCTCCTCATTGTCCCTGGGACAGGGGACGAGCAGGCTGGGGGACGCAGATAGATGTGACACCGAAGGAGAGCA-GGACTTTCCTACCGTGCCGGTGCCGAAGAAAACTCATCACGCTCTTGCGGTTTCAAAGGCAAATAAGGAGCCCCTTTAAACCACAGGCCTGTCCCTTAATTATACAAATGCAGCGATCAAAGTTATTATCTGTCCTTACAAAGGCTGCAGCTTTAATTGAATGGTGTGTTGCTACCTTTGAGAGAAAGCGTTCAATCTTCGTGGAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAG--AAAGGGATATGGCATTTAACAAGTAGGCTGCTTTATATGGAAATGTAAT---GAATACGGTTG-----ATAAAAAAGGGGAGAGACAAAAAGTTGTGAAGTTTCAAGCTGTGAAAGAACTTCAAAGTGTATTCAAATGTCACA-----TTGATTTTTCTTCAAATCACTAAGTAGGAAGTTTTTCAAAAGAGGAATATGATCCCCTATTTTATCCACTAATGCTTTATCTACAAAAAGGGGAGAAAAAGCGCAGTGTTTTCCTTTCACATGATATAATCCCTATATTGGAAGTCTTTATCTTTCTTTCCTAACCAAAGATTTCTTTGGTGTTTTCGAGATTTGTGACGT .......:..:::.---.......x....:.:....::...x...:-::...x.:..---...xxx.:..x....:xx::.x::.:.x..:.xx.:.x:::::::.:x:....::::...-...-..::..:....:..:.::x:x::.......------..x...:......:x..::.x.::..x..........x.....:::.......::....x..............:..:x......:x.....:...........:.-----------...........:x.:.......................:.......................x.x..:.....x............:x.:...:x..:..........-----------......::x:x........:.....:...:............:x:::.....x.:xx..xx........x:...:...xx...:......x......-..::.........:......:....:..x..-.........x..x.x.:xxx:::.xxx:x...:x.....:-.:..:x.:.x.......-...:x:.x..:.:........x..x:.:....:x....................:..............x.xx..:..x....:..::x:.x......x.........x...:...:.....x.....:::...::..:..:..:........:.x-------------..::..:....:.:x::x..x:....:..x::.:......--...x.:.x....::..x.....:x.:xxxxx....:.x:.....::...---:..x:.:....-----.........:x--------..............x.:::.....:.:........x..............:.x...-----..x.........x----.x::......x...--..........x:...:......x.-.x.........xx...x..:.....:.:.x.--.:.:.x.....:.....xxx.::.....:....x.x.....:..:.:.....:.x:........-.x..:...x:......xx....x:.::...:.:x:x.......:. 14M3D29M1I10M3I60M1I3M1I30M6I106M11I108M11I97M1I31M1D40M1I17M1I156M13I40M2D49M3D11M5D11M8I56M5D13M4I14M2I24M1I31M2I64M1I45M 764/1059 72.1% 1127/94230402 0.0% 87/1059 8.2% 63305743 NA +3507 chr4 + 190214555 96762032 96762031 96762142 111 TTTTTTGTAGTGATGACAACAACAATAACAACAAAAAAAAAAACAGGCTTTTCTGTTCCTCATATGTGTATTTTTCTTTCAAAAGTCTAATAATTGAATTTTAG--ATTTTTG chr4 - 94230402 29762476 29762475 29762585 64467818 64467817 64467927 110 TTCTTTATAGTGGCAACAACAACAACAACAGCAAAAAAAAAAAAAAAA--ACCCACCCTTTTTATATTTAGGATTCTCTCAAGAATCCTA-AACTGGCATTTAGTTATTTTTG ..:...:.....:::..........:....:............x.::x--x:.::::.:.:x...:.x..xxx....:....:.:..:x.-..:..:xx.....--....... 48M2D40M1D13M2I7M 74/108 68.5% 110/94230402 0.0% 5/108 4.6% 66999556 NA +3938 chr4 + 190214555 96799445 96799444 96799615 171 TACAGCGAGCTTGTCCAACCCATGATCCCCAGGCCACATGCAGCCCAGGACATCTTGGTATGTGGCCCAGCACAAATTTGTAAACTTTCTT----AAAACGTTATGAGATTTTTTTTGCAGTTTTTTGATTTGTTGTTGTTTTGTTCACCAGTTTTCGTCAGTGTTAGTGTATTA chr4 - 94230402 48654653 48654652 48654812 45575591 45575590 45575750 160 TACTGCAGGCATATCCAACCCATGATCCACAGACCACATGAGGCCCAGCACAGCTTGCAATTTGG--Caacctaaattggtgtgttattttcacaaaaacaaggtcacat---------atcctactggttttatgt--ttttgttcatctctctttttc--tcttaatgtttta ...x..::..x.:...............x...:.......x:......x...x....xx..x...--..:.x:.....x..:x::.x.:..----.....:xx:.x.x..---------.x::.x:..:...xx...--.........:.xx.:..:x..--.x...:...x... 65M2D24M4I15M9D18M2D21M2D13M 109/156 69.9% 160/94230402 0.0% 19/156 12.2% 48144792 NA +3077 chr4 + 190214555 96803661 96803660 96803709 49 AACATTATATTTTCAGATATTTGTACACTCATTTTTATAAAATTATTTA chr4 - 94230402 64944020 64944019 64944068 29286335 29286334 29286383 49 AACATTATATTTTCAGTGATAAGTACATTTATTTTTATAAAATCTTTTA ................xx..xx.....:.:.............:x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 31859641 NA +3078 chr4 + 190214555 96803779 96803778 96803836 58 TACACACACACACACACGCGTGCGCACACACATGCACATGCACACACACGCACACACA chr4 - 94230402 90815415 90815414 90815472 3414931 3414930 3414988 58 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA .::.:::......:..xx:....:....:...x:............:.x......x.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 5988364 NA +3414 chr4 + 190214555 96825887 96825886 96825968 82 TATAAATAATTTATATTAACATACTATATAATGTATATATTATAATATATATGTATTACATATATGTATGTATATAACGTAT chr4 - 94230402 68928695 68928694 68928770 25301633 25301632 25301708 76 TATAAAGCATTTTTAATG------TATATGAAGAATACATTGAAATATATATGGTTTACATATATATATATATATAAAGTGT ......xx....x..x.:------.....:.x.x...:...:x..........xx..........:...:.......x..:. 18M6D58M 59/76 77.6% 76/94230402 0.0% 6/76 7.9% 27897192 NA +3346 chr4 + 190214555 96881219 96881218 96881282 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAGAGGGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398810 33398809 33398873 60831530 60831529 60831593 64 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:.x.:x:x.....:........:.:::::......:.:....:........x.....x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 63482409 NA +3402 chr4 + 190214555 96881223 96881222 96881286 64 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAGAGGGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398810 33398809 33398873 60831530 60831529 60831593 64 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:.x.:x:x.....:........:.::.:.......x.x:............x.....x... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 63482413 NA +3021 chr4 + 190214555 96891541 96891540 96891635 95 CTTTTCTTTCTTGTTTTCTTCCTTTGCAGTCGTTGTTGTTGTTTTTTTCTTTTCTTTTTTTTTTTTTGAGACAGAGACCTGTTCTGTCTCCCAGG chr4 - 94230402 70081425 70081424 70081519 24148884 24148883 24148978 95 CTTGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTGAGG ...x.....:..x.........x:.xxx::x..x:..x..x.:.:.:...:..:..........::.x.:.xx:..:.:.:..x.xx...:x... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 26810116 NA +3211 chr4 + 190214555 96912165 96912164 96912256 92 AAATATTTACAGAAGAAAGGAAATAAATACAGAAGAGAAGAAGAAAGAAAGAAAAAGAAAGAGGATGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 32025556 32025555 32025647 62204756 62204755 62204847 92 AAACACATACACACAAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAGG ...:.:x....x.x:...x::......x:x...::.:..........:....x....:....:...xxx::.:.::x..:.:x.:.:.x... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 64886609 NA +3315 chr4 + 190214555 96921236 96921235 96921305 70 CTCTTGGGTTCAAGCAATTCTCCTGCCTCAGCCTTTCCAGTAGCTGGAAATACAGGCACAAGCCATTATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..::..........::x...x.xx.x...........x...........x....x.::..--...:.:.. 60M2D8M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 78724097 NA +3049 chr4 + 190214555 96937960 96937959 96938043 84 TGTCAAGAATCTCTCTCTCTCTCTCTCTCTGTGTATCTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTATA chr4 - 94230402 48089469 48089468 48089551 46140852 46140851 46140934 83 TGTCAAAAATCAACAGCACCTTGACT-TCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACA ......:....xx:xx.x.::.xx..-.....:x:.....:.:.:.::........:....x.x........:.:.:..x..:. 26M1D57M 56/83 67.5% 83/94230402 0.0% 1/83 1.2% 48848491 NA +3169 chr4 + 190214555 96965238 96965237 96965302 65 TGTTTTCCTGTGTTTTTGTTTGTTTCTTTGGTTGGTTGGTTTTTATTTGTT-------TGGTTTTGTTTTGA chr4 - 94230402 36775827 36775826 36775898 57454505 57454504 57454576 72 TGGTTTGGTGGGTTTTTGTTTGTTTGTTTGGTTGGTTGGTTGATTTTTGTTGTTGTCGCTGTTTTGCTTTAA ..x...xx..x..............x...............xx.x......-------:x......:...:. 51M7I14M 53/65 81.5% 72/94230402 0.0% 7/65 10.8% 60189411 NA +3085 chr4 + 190214555 96976053 96976052 96976119 67 CATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTT chr4 - 94230402 76182405 76182404 76182471 18047932 18047931 18047998 67 CATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ...x.x:.......x.:x.:..:xx........x............:...x.:..xx.:.:...... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 20793648 NA +3091 chr4 + 190214555 97014765 97014764 97014827 63 TTAAGTTTTCTTCATTAAATTTCCTTGATGTAACTTTCTTCTGATAGCTGCTTCATTTCTTTG chr4 - 94230402 31493824 31493823 31493886 62736517 62736516 62736579 63 TCGAGTTTTTTTAATTAAATTTTCTTGAAGCAATTTCCTTGAAACAGCTGTGTCATTTTACTG .::......:..x.........:.....x.:..:..:...xx:.:.....:x......:x:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 65520941 NA +3104 chr4 + 190214555 97023756 97023755 97023823 68 ACTAGCTCTGCAGTCTTAGGCAACTTACGCAACCTCTCTGAGCTCCAATTTCCTCTCCATTAAGAGTT chr4 - 94230402 60684686 60684685 60684753 33545650 33545649 33545717 68 ACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAAGGTT ...xx..x........x......x.x.:::x.........x..:..x........::.xx...::... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 36339070 NA +3031 chr4 + 190214555 97027812 97027811 97027866 55 CATCTATTTCATGTTCTCTCTTTTTTTTTTTTTTTAGAGTAATGTGATTTAGCAC chr4 - 94230402 69768512 69768511 69768566 24461837 24461836 24461891 55 CAACTTTCTCTTGTTCTGTTTTTTTTTTTTTTTGTACAGTTATGTACTTTAGCAC ..x..x.:..x......x.:.............x..x...x....:x........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 27259300 NA +3456 chr4 + 190214555 97090184 97090183 97090251 68 TATTCATTTTCCTATAGAATTTCCTGCAGAATCCAAACTATATCCTGACAGCATTGACTTTTTAAACA chr4 - 94230402 50905715 50905714 50905782 43324621 43324620 43324688 68 TAATGATTTTCAGTTAGAAATTGCTGCAGAACGCAAAGTATATACTGACAGCAGTGACTTGTTATACA ..x.x......xxx.....x..x........:x....x.....x.........x......x...x... 68M 54/68 79.4% 68/94230402 0.0% 0/68 0.0% 46184469 NA +3264 chr4 + 190214555 97121148 97121147 97121220 73 ATGTATATGTGTGTGTATATATGTGTAT----ATGTGTGTTTGTGCATATATACATATACACACACACAAAAATAAA chr4 - 94230402 8395788 8395787 8395864 85834539 85834538 85834615 77 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ....:.:.:......:...x.::.....----..:...:.x:x.:...xx.....:.:...........:.x.:... 28M4I45M 53/73 72.6% 77/94230402 0.0% 4/73 5.5% 88725360 NA +3032 chr4 + 190214555 97175021 97175020 97175078 58 CTCCCGAGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCTTGGACTAGAGGTG chr4 - 94230402 18197139 18197138 18197196 76033207 76033206 76033264 58 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.:.:.......:.x...x..x.x........::.:.......x.:....x.x... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 78977882 NA +3322 chr4 + 190214555 97223431 97223430 97223536 106 AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAAAAGGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGAAGGGA chr4 - 94230402 10424971 10424970 10425074 83805329 83805328 83805432 104 AGGAAAGCAGTATGTTAGGGAG--AGAAATGAAAGGTAGAAAAAAAGAAATCAAGGTGTGTCAGAGAGGAAAAGGATGGGAAATGGAGGAATGGGAGTAAAAGGAA .....:.x..x.x.xx...:..--..:..x...:.:x.....:.......xx.:..x.x.xx:.:....::.:..:x.....:x.:...:.x....:x::....:. 22M2D82M 67/104 64.4% 104/94230402 0.0% 2/104 1.9% 86798460 NA +3438 chr4 + 190214555 97223456 97223455 97223532 77 GGAAGGAAGGAAAGAAAGAAAG--AAAAAAGGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGAA chr4 - 94230402 40472541 40472540 40472619 53757784 53757783 53757862 79 GGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ..::.:..::.......:....--......:.......:....:....:.:xxx::..:.x...::::.x.....:... 22M2I55M 53/77 68.8% 79/94230402 0.0% 2/77 2.6% 56750915 NA +3318 chr4 + 190214555 97246312 97246311 97246422 111 ATGTCACTGCTATTATAAATAGTGTTCTGATGAACATATAAGTGCATGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA---GTCTCACT-CTGTC--ACCCAGGCTGGAGTCAG chr4 - 94230402 38293175 38293174 38293291 55937112 55937111 55937228 117 ACATTACTGCCAGTAGAAGTTTTTCTCCACTGCACATGCAAATGCAACCTTTTTTCCTTTTTTTTTTTTTTCTGAGAAAAAATGGTTTCATTGCTTTCAGACACAGTTTGAAGACAG .::.:.....:.x..x..:.xx.x:..::x..x....::..:....xx::.....::..............:.....x::.---..:...:.-..x..--..x...x:..:..x... 81M3I8M1I5M2I17M 75/111 67.6% 117/94230402 0.0% 6/111 5.4% 58953137 NA +3024 chr4 + 190214555 97246334 97246333 97246392 59 TGTTCTGATGAACATATAAGTGCATGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 75478958 75478957 75479016 18751387 18751386 18751445 59 TGTTCTGGCAAATGCAGAAGGGTGTGTTATTTTTTTTTTTTTTTCTTTTCTGGGAGGAA .......:::..:::.x...x.::...:x...............:....:..:..x.:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 21767376 NA +3081 chr4 + 190214555 97254558 97254557 97254616 59 TAACCTGGCTTCTGAATATTTTTACTTACTTTATTTTTTGTTTGTTTGTTTGTTTTTAT chr4 - 94230402 3569687 3569686 3569745 90660658 90660657 90660716 59 TAACTTGTTTTCATAAGATTTTTAAGTATTGGGTTTTTTGTTTGTTTGTTTGTTTATAT ....:..x:...xx..x.......xx..:.xx:......................x... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 93684871 NA +3301 chr4 + 190214555 97315277 97315276 97315329 53 TGTGTGTGTGTGTGTGTGTATACATACACATACATACGTATACATACACATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:.:..::x....x..::..:.:........:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 26332648 NA +3405 chr4 + 190214555 97323539 97323538 97323605 67 TTATATATATATACATATATATGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATAAAAT chr4 - 94230402 48089494 48089493 48089557 46140846 46140845 46140909 64 TTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT---TACACAAAAT ..x.:..x:.x.::.....:.:.............x.x................---..:.:..... 54M3D10M 51/64 79.7% 64/94230402 0.0% 3/64 4.7% 49234045 NA +3031 chr4 + 190214555 97323541 97323540 97323590 50 ATATATATATACATATATATGTGTGTGTATGTGTGTGTGTGTGTATATAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...:........:.......x.....:.:.x::...........:.:x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 77619261 NA +3051 chr4 + 190214555 97323564 97323563 97323608 45 TGTGTATGTGTGTGTGTGTGTATATATATATATATATAAAATCTC chr4 - 94230402 89821282 89821281 89821326 4409077 4409076 4409121 45 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTC .....:...x.x.......................:..x.::... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 7502282 NA +3024 chr4 + 190214555 97384918 97384917 97384983 66 TATATATATTTTATATATATATATTATATATATGTGTGTGTGTGTATATATATATATATTTTTTTC chr4 - 94230402 27034804 27034803 27034869 67195534 67195533 67195599 66 TATAAACGTCCTGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCC ....x.::.::.:x:x..x...xx.....................:.:......:x.x.:....:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 70350114 NA +3313 chr4 + 190214555 97384936 97384935 97385006 71 ATATATTATATATATGTGTGTGTGTGTATATATATATATATTTTTTTCATTAGTTCTGTCCTTCTAGAGAA chr4 - 94230402 27034820 27034819 27034879 67195524 67195523 67195583 60 ATTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTT-----------TCCTTCTACAAAA ..x............:...........:.:.:......:x...:...-----------........x.:.. 47M11D13M 50/60 83.3% 60/94230402 0.0% 11/60 18.3% 70350116 NA +3373 chr4 + 190214555 97440037 97440036 97440102 66 AGTAAAAATCATCCCATACGGTTTTATTTTTTTTCTTTTTTTAAAAAAAGAATACATGCAAGGGTG chr4 - 94230402 43944018 43944017 43944083 50286320 50286319 50286385 66 AGTAAAGGCCATTCCATCATGTTAAATTTTCTTCCTCTTTTTAAAAGAGAAATACATAGAAGGATG ......:::...:....xxx...xx.....:..:..:.........:.::.......:x....:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 53496019 NA +3045 chr4 + 190214555 97454521 97454520 97454583 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGGGATTCAAAAGTTGCCACTA chr4 - 94230402 65182390 65182389 65182452 29047951 29047950 29048013 63 AGAAAAGAAGGAGGAAAAAAAAAAAAAGAAACTGAAAAGTGGGGGAATAAAAGGTCGCCACTA .:....:..::.::.............:...xx:...::x::....x.x...:..:....... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 32272131 NA +3073 chr4 + 190214555 97456893 97456892 97456934 42 AAAAAAAAAAAAAGAAAATTAAAAAAAAAAAAAAGATGGGTA chr4 - 94230402 90390567 90390566 90390608 3839795 3839794 3839836 42 AAAGAAAAAAAAAGATAGTTAAAAAAAAAAAAAAGAAGGGCA ...:...........x.:..................x...:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 7066326 NA +3976 chr4 + 190214555 97464505 97464504 97464743 239 CTCCTGGGTTTAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCACACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGA-CACAAGGTTTCCCAGACAAGTCTCCAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCT-----CCCAAAT---GTTCCTCATATTTTTACATGCTTATTTACCCTGTCACTGGTACTTGCCTGGTACATGTCACCATATAATAGTA chr4 - 94230402 18197139 18197138 18197367 76033036 76033035 76033264 229 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG----------TATCATCCTTTCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCCTTCTGCCCTCCTCTTTCAGTCTACTTCCTCAAATCAGGTTCCCAATGTCCTCAAATGC----ATACCTGGGTACTACAGCTTCCCTTTCCC---TCATCCTATGATGGTA ..:.......:...::x...x.xx.x........::.............:....x...--......::..----------.x.::.x:...:.xx.x.-:...x:x.......:..x..x::..x.x..:.x..:x.xxx:x::.:x...x::.::.:..-----.:.....---.....:x..:.::.:.x....----x....:x.x:...:xx:...x...xx:x.---...:.x...:..:... 58M2D10M10D18M1I61M5I7M3I21M4D29M3D16M 140/220 63.6% 229/94230402 0.0% 28/220 12.7% 79267366 NA +3045 chr4 + 190214555 97486800 97486799 97486847 48 CTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821272 89821271 89821319 4409084 4409083 4409131 48 CTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTA ...x..x:x:.........x.x.......................:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 7665528 NA +3819 chr4 + 190214555 97486806 97486805 97486879 74 TGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:......::.:x:::.....x..:....:...::x.::..xx.....x.............x..... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 89091017 NA +3596 chr4 + 190214555 97486810 97486809 97486881 72 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTAT--ACAAACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:......::.:x::..:...x..:....:....:x.::..--.:.x...............x..... 47M2I25M 54/72 75.0% 74/94230402 0.0% 2/72 2.8% 89091021 NA +3353 chr4 + 190214555 97486812 97486811 97486863 52 TGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACA chr4 - 94230402 70982629 70982628 70982680 23247723 23247722 23247774 52 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...........:........:....:.x:...x..:...:..:.....x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 26504183 NA +4096 chr4 + 190214555 97486812 97486811 97486885 74 TGTGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:......::.:x.:..:...x..:....:.:.::x..:.:x..:.................x..... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 89091023 NA +4467 chr4 + 190214555 97486814 97486813 97486898 85 TGTGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACAA chr4 - 94230402 8395789 8395788 8395873 85834530 85834529 85834614 85 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA .......:......::..x.:..:...x..:.........:x....xxx.:.................x.....x.::x.:.x.. 85M 64/85 75.3% 85/94230402 0.0% 0/85 0.0% 89091025 NA +3862 chr4 + 190214555 97486816 97486815 97486898 83 TGTGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACAA chr4 - 94230402 8395789 8395788 8395871 85834532 85834531 85834614 83 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA .......:......:...x.:..:...x..:..:.:.:.::x:.x.:xx.:.................x.....x.::x.:.. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 89091027 NA +4194 chr4 + 190214555 97486818 97486817 97486891 74 TGTGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:.....::...x.:..:...x..::.......:.xx...:xx.:.................x..... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 89091029 NA +3572 chr4 + 190214555 97486820 97486819 97486898 79 TGTGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACAA chr4 - 94230402 8395789 8395788 8395867 85834536 85834535 85834614 79 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .......:...:.::...x.:..:...x.::..:.:..::xx:...:xx.:.................x.....x.::. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 89091031 NA +3569 chr4 + 190214555 97486822 97486821 97486902 81 TGTGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACAATGGA chr4 - 94230402 8395789 8395788 8395868 85834535 85834534 85834614 80 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA-AATGAA .......:.:.:.::...x.:..:...x..::...::.x:.x:...:xx.:.................x.....-....:. 74M1D6M 57/80 71.2% 80/94230402 0.0% 1/80 1.2% 89091033 NA +3446 chr4 + 190214555 97486824 97486823 97486897 74 TGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACA chr4 - 94230402 4481679 4481678 4481752 89748651 89748650 89748724 74 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ...:...:.x.x:.....x:.:.:.......::.......:.....:x....:..x.xx...:.:.:::..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 93005145 NA +3753 chr4 + 190214555 97486824 97486823 97486905 82 TGTGTGTATATATATATATATATATGTATGTATACAAACACACACACACACACACACACACACACACACACACAATGGAATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .........:.:.::...x.:..:.:.x.::...::x.::.x:...:xx.:.................x......xx..... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 89091035 NA +3050 chr4 + 190214555 97486826 97486825 97486874 49 TGTGTATATATATATATATATATGTATGTATACAAACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC .....::..:.:...:...:...x.:...:....x........:..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 72093566 NA +3053 chr4 + 190214555 97488324 97488323 97488416 93 ATTAATTTAATCTCAAGAAAAGTCCTAAGAGTTA---------------TCCCAGTTTACAGATGAGAAAACTGAGGAACAGAAAGATTAACTATTTTGCTGAAGATC chr4 - 94230402 10729156 10729155 10729262 83501141 83501140 83501247 107 ATTGATTTAGCCTCAC-AATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...:.....::....x-..x.x:...:x...x..---------------::...x.......:..:...........x...x.x..:....x..x.....:x.:::.. 16M1D17M15I59M 66/92 71.7% 107/94230402 0.0% 16/92 17.4% 86759168 NA +3278 chr4 + 190214555 97568884 97568883 97568941 58 TTTTGTTTTTTGTTTTGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTGCAGTTGTTACT chr4 - 94230402 21034575 21034574 21034632 73195771 73195770 73195828 58 TTTTGGTTTCTATCTTTTATAATTTTTTGTTTGTTTGTTTGTTTTTGCAGTTGTCATT .....x...:.:.:..x.x.xx..................xx............:.:. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 76534309 NA +3072 chr4 + 190214555 97568890 97568889 97568943 54 TTTTTGTTTTGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTGCAGTTGTTACTGG chr4 - 94230402 27397176 27397175 27397229 66833174 66833173 66833227 54 TTGTGGTTTTGTGTTTGTTGTTATTTGCTTGTTTTGCTTTGTTTTTGTTACTGG ..x.x.......x...x..x..:....:........:....:xx.......... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 70171714 NA +3122 chr4 + 190214555 97598443 97598442 97598486 44 AACAAGCAAACACACAACAACAACAACAGCAAAAACCAAAGCTG chr4 - 94230402 14290079 14290078 14290122 79940281 79940280 79940324 44 AAAAAACAAACAAATAACAACAACAACAAAAAAAACCAAAGCTG ..x..:......x.:.............:x.............. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 83308364 NA +3152 chr4 + 190214555 97599825 97599824 97599885 61 AAAAAAAAAAAAAGAAAAGAAAAGAAAAGGAAAAAAAAGAAAAGAAAATGTGGCACATATA chr4 - 94230402 10862985 10862984 10863045 83367358 83367357 83367418 61 AAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACA .............:.....::x:.:.:.:x.....x..x..xx.........x......:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 86736840 NA +3154 chr4 + 190214555 97668658 97668657 97668720 63 AGGAAAGAAGGGAGGGAGGGAGGGAGGAAGAAAGAAGAAAAGAAAAACAAAAGAAAAGAAAAA chr4 - 94230402 44393358 44393357 44393420 49836983 49836982 49837045 63 AGGATGGGAGGGATGGAGGGGAGAGGCAAAAGGAAAGAAAAGAAAAACAGGAGTTATGAAAAA ....x:.:.....x......::.::.x..:.:::...............::..xx.x...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 53275300 NA +3277 chr4 + 190214555 97686213 97686212 97686266 54 CAAGATGCTCCTTTCCTTTTTCTTTTTCTTTTCCTCTTTCTCTCTCTCTCTCTC chr4 - 94230402 67430009 67430008 67430062 26800341 26800340 26800394 54 CAGAAAGCTCGCTTCCTTTTTTTTTTTTTTTTCCCCTCTCCTTCCTTCTCTCTC ..::.x....x:.........:.....:......:..:..::..::........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 30256204 NA +3066 chr4 + 190214555 97703772 97703771 97703832 61 ATTTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTATATATACATATA-TACACA chr4 - 94230402 48089492 48089491 48089553 46140850 46140849 46140911 62 ACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACA .:..x...:x..x........:.:........:....x.x..:.:.:..:.....-...... 55M1I6M 47/61 77.0% 62/94230402 0.0% 1/61 1.6% 49614280 NA +3087 chr4 + 190214555 97703788 97703787 97703838 51 ATATATATGTGTGT----GTGTGTGTGTGTATATATACATATATACACAGGGGGA chr4 - 94230402 33398803 33398802 33398857 60831546 60831545 60831600 55 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGA .....x....:.x.----.....:......:....:..............:.:.. 14M4I37M 43/51 84.3% 55/94230402 0.0% 4/51 7.8% 64304985 NA +3174 chr4 + 190214555 97728900 97728899 97728939 40 TGCATGTGTGTGTGTGAGAGAAAGAGAGAGAGAGAAAGAA chr4 - 94230402 18982317 18982316 18982356 75248047 75248046 75248086 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..::.................:............:...:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 78746583 NA +3026 chr4 + 190214555 97745243 97745242 97745295 53 CTAAAAAAAAAACAAAAAAACAAAAAAAAAAACAATTGCAGAAAAGTGCCCTA chr4 - 94230402 64982443 64982442 64982495 29247908 29247907 29247960 53 CTGAAAAAAAAACAAACAAACAAAAAAAAAAACAATAGTCAACACATAGCCTA ..:.............x...................x.:x:.x.x:.:x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 32762800 NA +3136 chr4 + 190214555 97752332 97752331 97752390 59 CTTAATTTTACAGATGAGAAATCTGAAGCTTAAAGAGGTTAAGTGACTTCTCCAAAGTC chr4 - 94230402 10729204 10729203 10729262 83501141 83501140 83501199 59 CTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:x.........:..:....x....:..x:.x.x.........:.:..x:...:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 87023128 NA +3017 chr4 + 190214555 97764109 97764108 97764165 57 CATGCACACACACACACACACACACACACACACAGAGGCACAGACAGACACACACAC chr4 - 94230402 80495438 80495437 80495494 13734909 13734908 13734965 57 CATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ...::.:.....x...x.:.::.........x...x:.:.......x....:.x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 17268671 NA +3285 chr4 + 190214555 97784053 97784052 97784098 46 AACTTAAAGTATAATTAAAAAAAAAAAAAGAAAAAGAAAAAGGAAA chr4 - 94230402 26643715 26643714 26643760 67586643 67586642 67586688 46 AACACAAAGTACAGTTAAAAAGAAAAAAAGAAGAAGAAAAAAGAAA ...x:......:.:.......:..........:........:.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 71140338 NA +3314 chr4 + 190214555 97813632 97813631 97813708 77 AGGAGTTCAAGTCCAGCTTGGGCAGCATAGCAAGACCCTGTCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 36313555 36313554 36313628 57916775 57916774 57916848 74 AGAATTTCAAAT---GACTTGGCAGCATAGGAAGAGCATCTCTATTTAAAAAAAAAAGAAAAAAAAAAAGCAATAGA ..:.x.....:.---.x:.x..........x....x.x.x...x..x..........:...........:x..x.:. 12M3D62M 57/74 77.0% 74/94230402 0.0% 3/74 4.1% 61500077 NA +3244 chr4 + 190214555 97813679 97813678 97813769 91 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATGTTTTATAAATAAAAAATGTACACAATTTTATTTCATTTAAA--------TTTTTAAAATAT chr4 - 94230402 34847626 34847625 34847720 59382683 59382682 59382777 95 AAAGAAAAAAGAGAAAAAAAAATAACATAAAAATGGAATTTTATAAATAACAGATGTGAGC----TTTTTTTATGAAAAATGTTTTGTTTTTAAAATGT ...:......:.:.........x..x.x.....xx:x:............x.:....:x:.----..x...:..xx...--------..........:. 61M4D14M8I12M 66/87 75.9% 95/94230402 0.0% 12/87 13.8% 62966053 NA +3105 chr4 + 190214555 97816692 97816691 97816782 91 TCTATCTTCCTTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCTCTTTCTCTACCTTTCTTTCTTTCTTTTTCTTTTCTTTTCTTTTTCTTTC chr4 - 94230402 93177151 93177150 93177241 1053162 1053161 1053252 91 TCTGTCTCCTTCCCATGTCTTTGCCCCTCTCCCCCTTCCTCTGGATTTCTATCTTTCTATCTCTCTTCTTTCCATGATCTCGTTCCCCTCC ...:...:.:.::.x.x:...:x::...::.:....:.....xxx.:....:......x...:....:..:::x.xx.:..x..::.:.:. 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% 4639541 NA +3647 chr4 + 190214555 97816695 97816694 97816811 117 ATCTTCCTTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCTCTTTCTCTACCTTTCTTTCTTTCTTTTTCTTTTCTTTTCTTTTTCTTTCACTCTCTTTCTGTCT-------CTCTCTCTTTCTGA chr4 - 94230402 83960509 83960508 83960632 10269771 10269770 10269894 124 ACCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTTGAAATACCTTTACATTTCTGA .:....x...x:.::..:::::.xx.x...::...:.:x:.:.::x.:.:......xx::.:..x..::...x..:....:..........x.:.......:.-------..:.x:x....... 103M7I14M 73/117 62.4% 124/94230402 0.0% 7/117 6.0% 13856186 NA +3613 chr4 + 190214555 97816702 97816701 97816870 169 TTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCTCTTTCTCTACCTTTCTTTCTTTCTTTT---TCTTTTCTTTTCTTTTTCTTTCACTCTCTTTCTGTCTCTCTCTCTTTCTGACCCTCTTCCTTCCTTCCTTCCCTTCCTGCCTTCCTCCTTCCTTTCTTTCTCTTTCTCTT chr4 - 94230402 9693678 9693677 9693835 84536568 84536567 84536725 158 TTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCT-TCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCT-------------TTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ...:xx.::..x.:.:...xx..:..:....:.xx..:..-:..x.:.x.......:..---.x:..:xx:.x..xx..:.x::..x:xx:....x:.....:..-------------....:.::..:....x......:::..:x.:x..::........:.....:... 40M1D18M3I43M13D54M 97/155 62.6% 158/94230402 0.0% 17/155 11.0% 88123024 NA +3037 chr4 + 190214555 97816858 97816857 97816908 51 TTCTCTTTCTCTTTCACTCTTTCTTTTTCTTTTTTATTTCTCTCATATATG chr4 - 94230402 18933613 18933612 18933663 75296740 75296739 75296790 51 TTCTCTTTCTTTTCCACTCTTGGTTTTTCTTTTCTTTTTCCCCAGTATGTG ..........:..:.......xx..........:.x....:.:x:...:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 78883245 NA +3328 chr4 + 190214555 97816874 97816873 97817028 155 CTCTTTCTTTTTCTTTTTTATTTCTCTCATATATGCACATACATAAATATAAATATACATTTATACACATGTGTGTAGAAAATATATATTATATATTTTATATATTATATATTATTTTATATATACATATATTTCCTATTGGTTCTGTTTTTCTG chr4 - 94230402 38920634 38920633 38920765 55309638 55309637 55309769 132 ctttttttctttctttctttatttttttTTGAAAGAGCATAAAACAGCAAAA-----------------------TAGGACAGGTATATTATATATATTATATCTTTTACAGCATTTCACAGTTTCATATATTCAGTCTCTTCTCTGTTTTTATG ..:...:.:.......:..xx..:.:.:x.:x.x.x:....x.xx.::.x..-----------------------...:.x.x:............x......x..x..:.x:....:.:.xx.x........:xx.x.:xx:.........x.. 52M23D80M 87/132 65.9% 132/94230402 0.0% 23/132 17.4% 58896240 NA +3118 chr4 + 190214555 97852931 97852930 97852987 57 ATTCTACATTAATGTTCCTATAAATTAACATATTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 20804163 20804162 20804219 73426184 73426183 73426240 57 ATTCTAGCATGAGATTGCTACAATTTAAGATATTCTCTTTTTTTTTTTTTTTTCTTT ......xxx.:.x:..x...:..x....x.....:..................:... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 77048768 NA +3351 chr4 + 190214555 97852941 97852940 97853014 74 AATGTTCCTATAAATTAACATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCT---CACTCTGT chr4 - 94230402 46673254 46673253 46673330 47557073 47557072 47557149 77 AACACTCATAAAGATGGACATACTTTCTTTTTCTTTTTTTTTCTTTTTTGTTTAAAAATAAAGCTTTGACAATCTGT ..:::..x..x.:..x:.....:.........:.........:......x...x:.:.:.:..::.---..x..... 66M3I8M 54/74 73.0% 77/94230402 0.0% 3/74 4.1% 51179687 NA +3052 chr4 + 190214555 97871239 97871238 97871303 65 AATAACAATCACATAAAGCAAAAGAAAGCAAAGAAAGGAAATAAAGAAAAAGGGCAGGAATTTTG chr4 - 94230402 25927331 25927330 25927395 68303008 68303007 68303072 65 AGCACCAATCACATTAACCCAAAGAAAGCAAACAAAGGAAATAAAGTATTTGAAAGAAAATTTTG .::.x.........x..x.x............x.............x.xxx.::x:::....... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 71943908 NA +3215 chr4 + 190214555 97883371 97883370 97883443 73 GAGCAAGACCTTGTCTAAAATTTTTAAGAAAAAAAAAATAGAGAGAGAGAGA-AAGCATT-CAGATACAGTTATG chr4 - 94230402 83177073 83177072 83177147 11053256 11053255 11053330 75 GGGCAAAAATTCAGCCAAAATGTTTAAAAAAAAAAAAAGAGAGAGAGAGAGATACACATTCCAGACTTAGCTGTG .:....:.x:.::x.:.....x.....:..........x.............-.x:....-....:x:..:.:.. 52M1I7M1I14M 55/73 75.3% 75/94230402 0.0% 2/73 2.7% 14706298 NA +3382 chr4 + 190214555 97931620 97931619 97931693 74 TAAAGATGTTGGCTTGAAGTTT-TTTTGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTTTT chr4 - 94230402 20380482 20380481 20380553 73849850 73849849 73849921 72 TAAATATGT---CTTGAAGGTTATTTTGTTTTTTGTTTGTTTGTTTTTTGTTGTTGTTTTTCTAAATTAATCTTT ....x....---.......x..-..........x....x...................x..x.xx:..:x.:... 9M3D10M1I52M 59/71 83.1% 72/94230402 0.0% 4/71 5.6% 77551138 NA +3128 chr4 + 190214555 97931635 97931634 97931702 68 GAAGTTTTTTTGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTT------------GTTTTTTTATCTTTTT chr4 - 94230402 69971087 69971086 69971166 24259237 24259236 24259316 80 GAAATGTTTTTTTTTTTAATGTTTGTGGGGTTTGTTGTTGTTGTTGTTTGTTTCTGGAGGGGAGATTGTTTTGTTTTTTT ...:.x.....x.....::.x...x..xxx......................------------:..x....:.:..... 52M12I16M 54/68 79.4% 80/94230402 0.0% 12/68 17.6% 27960548 NA +3400 chr4 + 190214555 97931636 97931635 97931698 63 AAGTTT--TTTTGTTTTTGGTTTTT--TTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTTTTTATCT chr4 - 94230402 70541006 70541005 70541072 23689331 23689330 23689397 67 AAGTTTCATTTTGAATCTGTTTGTTGGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTTTTTCTTATCT ......--.....xx.:..x..x..--.........................x..x....:...... 6M2I17M2I40M 55/63 87.3% 67/94230402 0.0% 4/63 6.3% 27390630 NA +3162 chr4 + 190214555 97931640 97931639 97931687 48 TTTTTTGTTTTTGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTG chr4 - 94230402 81444617 81444616 81444664 12785739 12785738 12785786 48 TTTTTTGTTGTTATTTTGTTTGTTTCTTTTTGTTGTTGTTGTTTTTTG .........x..:x...x.......:..x...............x... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 16487023 NA +3008 chr4 + 190214555 97931651 97931650 97931703 53 TGGTTTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTGTTTTTTTATCTTTTTG chr4 - 94230402 39238717 39238716 39238769 54991634 54991633 54991686 53 TGGATTTTTTATTTGTTGTTGTTGTTGTTATTTCTATTTTTTTCATTTTCATG ...x......:...x..............:...x.xx......:..:..:x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 58692934 NA +3020 chr4 + 190214555 97991431 97991430 97991497 67 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTATATATACCACATTTTCTTTATC chr4 - 94230402 27486726 27486725 27486792 66743611 66743610 66743677 67 GTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAAAGCACCTATCTGTTTTACC .................:x..x...x.....x..:...x...x....x.xxx.x:..:.x:....:. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 70504705 NA +3284 chr4 + 190214555 97991438 97991437 97991495 58 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTATATATACCACATTTTCTTTA chr4 - 94230402 89821282 89821281 89821336 4409067 4409066 4409121 55 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA---GCCTCAATCTCTTTA .........x.x.........:................:.---:..x..x.:...... 40M3D15M 47/55 85.5% 55/94230402 0.0% 3/55 5.5% 8170156 NA +3007 chr4 + 190214555 97991443 97991442 97991480 38 GTGTGTGTGTGTGTGTGTATATATATATATGTATATAT chr4 - 94230402 9151856 9151855 9151893 85078510 85078509 85078547 38 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ................:......x....x......... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 88839587 NA +3641 chr4 + 190214555 98064976 98064975 98065054 79 TGCAGCCTGAAACTCCTGGGCTCAAGCCTTCCTTCCACCTCAGCCTCCCCGGTAGCTGGAACTACAAGTGCATGCCACT chr4 - 94230402 18197127 18197126 18197203 76033200 76033199 76033276 77 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACT .:.....::..:..:.....:.....:x:.:.x:xx:x........::.x:...............x.....--..... 72M2D5M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 79867849 NA +3063 chr4 + 190214555 98082402 98082401 98082472 71 TTTCTTCCCATCTTTCCCATGTGCAGGTCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 53202546 53202545 53202616 41027787 41027786 41027857 71 TCTCTTCCTCGCGTTCCTAGGTGAATGTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTT .:......:xx.x....:.x...x.x...:x::.::.....:.::............::.:x..:...... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 44879856 NA +3054 chr4 + 190214555 98136905 98136904 98136985 81 AAAAACCTTTATTCCTGCAACAAAAGTAGGGAAAAAGGAAAAAGAACAGATGAGATAAATGGAAAGCAAATAGCAAAAGAG chr4 - 94230402 17831000 17830999 17831080 76399323 76399322 76399403 81 AGAAGCCTGTATTTTTCATTAAAGAGTAGAGGCAAAAGAAAAAAAGCAGATGGAATCAATGGGAGGGCAGGAGAAAGAGAG .:..:...x....::.xxxxx..:.....:.:x...:......:.:......::..x.....:.:.xx.:x..x..:.... 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 80305905 NA +3022 chr4 + 190214555 98140792 98140791 98140849 58 AAGGACATCAACAGCAACAAAAAAAGAATTAAAAAGAAGAGAAAAACAAACAAAAGTG chr4 - 94230402 80385290 80385289 80385347 13845056 13845055 13845113 58 AAAAACATCAATAACAACAACAAAAGAAAGAAAAGGGAAAAAAAACCCAACAACAATG ..::.......:.:......x.......xx....:.:.:.:....x.x.....x.:.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 17755502 NA +3183 chr4 + 190214555 98179616 98179615 98179694 79 TTCTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTTTGTGGGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982276 18982275 18982354 75248049 75248048 75248127 79 ttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....x.x.x.x.x.x...x.x.x.x.x.x.x.x.:.x.x...........x....x...................::.. 79M 58/79 73.4% 79/94230402 0.0% 0/79 0.0% 79197340 NA +3696 chr4 + 190214555 98179649 98179648 98179703 55 TTTGTGTGTGTGTGTGTTTGTGGGAGAGAGAGAGAGAGAGAGAGAGCTTATGTTG chr4 - 94230402 18982311 18982310 18982365 75248038 75248037 75248092 55 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTG .:.x.............x....:.................::..:::....x... 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 79197338 NA +3497 chr4 + 190214555 98198753 98198752 98198811 59 CTCCCCTCTCCCCTCACCAAAAAAAAAAAAAAAAAAAAAAAAACCCGCACAAAAAGCAG chr4 - 94230402 59404623 59404622 59404676 34825727 34825726 34825780 54 CCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGA-----CACAAAATGCAG .:......:....:.x..................:.....:.-----.......x.... 42M5D12M 47/54 87.0% 54/94230402 0.0% 5/54 9.3% 38794130 NA +3045 chr4 + 190214555 98198755 98198754 98198801 47 CCCCTCTCCCCTCACCAAAAAAAAAAAAAAAAAAAAAAAAACCCGCA chr4 - 94230402 16535120 16535119 16535166 77695237 77695236 77695283 47 CCCCACCCCCCCCCCCAAAAAAAGAGAAAAAAAAGAAAAAACTGGCA ....x.:....:.x.........:.:........:.......:x... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 81663635 NA +3604 chr4 + 190214555 98207559 98207558 98207642 84 CTGCAGCCTCAACTTCTCCGGGTTCAGGTGGTTCTCCTACCTCAGCCTCCCAAGTAGCTGGAACTATAGTCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCC-CAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....-...xx::..:.......:...x...x.xx:x........::................:.--.:..::....::.. 8M1D59M2D14M 60/81 74.1% 81/94230402 0.0% 3/81 3.7% 80010433 NA +3003 chr4 + 190214555 98216847 98216846 98216892 46 AGTCACAAAAGAAAAAAAAAAAAGAAGAGAGTTTGTGAGCAGATGG chr4 - 94230402 78874821 78874820 78874866 15355537 15355536 15355582 46 AATTACAAAAAAAAAAAAAAAAAGAAGAAAGACTGTGGGAAGGTGG .:.:......:.................:..x:....:.x..:... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 19342026 NA +3035 chr4 + 190214555 98256826 98256825 98256881 56 ATGATATGTACTTATAGCTATTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAG chr4 - 94230402 3834824 3834823 3834879 90395524 90395523 90395579 56 ATAATGTACTTTTGTAATAATTACTCTTTTTTTTTTTTTTTCTTTTTGAGGTGAAG ..:..:.::x:..:..::x...x..:...............:........::.... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 94422002 NA +3174 chr4 + 190214555 98300673 98300672 98300785 113 TTACAAGCATGAGCCACCGTGCCCAGCCTGTAGACATAACATTTATATCTATTGGGAAACCAAAAAACAAAAAACAAACAAACAAAAAAAACTGGTGTGATTTGCTTTATAGT chr4 - 94230402 18159803 18159802 18159899 76070504 76070503 76070600 97 TTATAACCA--AACCACAGTGCCC---CTGCA-----------TATATTTGTGGGAGAACTAAAAACTAACAAACAAACAAACAAAGTGAAATGGATTAACCTGATTCATGAT ...:..x..--.:....x......---...:.-----------.....:.:.x..::...:.....x:..x...............:x:..x...xx.:.::..x..:..::. 9M2D13M3D5M11D70M 70/97 72.2% 97/94230402 0.0% 16/97 16.5% 80140870 NA +3088 chr4 + 190214555 98308129 98308128 98308178 50 TCAAAGAATATATATATGTGTGTATATATGTGTGTGTGTGTGTGTATGTA chr4 - 94230402 83983267 83983266 83983316 10247087 10247086 10247136 50 TCCAAAAATATACATATGTGTGCATCTCTGTGTGTATTTGTGTGCATATA ..x..:......:.........:..x.x.......:.x......:..:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 14324862 NA +3323 chr4 + 190214555 98308170 98308169 98308250 81 GTGTATGTATGTGTATGGGTGTGTGTATATGTGTGCGTGTATATAGGTATATACATATATGTGCATATATGTGTATATACA chr4 - 94230402 39267142 39267141 39267210 54963193 54963192 54963261 69 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGG------------TGTGCATCTGTATGAATATACA ..:..x:.:..........:.:::..:xx......:...........------------.......x.:.:..x....... 47M12D22M 53/69 76.8% 69/94230402 0.0% 12/69 17.4% 59041028 NA +3696 chr4 + 190214555 98308203 98308202 98308302 100 TGCGTGTATATAGGTATATACATATATGTGCATATATGTGTATATACATGTATATATACACACACACCCACACACATATATAT-ACACACACACACTATAT chr4 - 94230402 8395789 8395788 8395887 85834516 85834515 85834614 99 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTA--CATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACAT ..:......:.:x.:...x....:...x.:.....:.:..:x..--...xx...:.:..........x..x.....x..:x..-.x.x..x..x....:.. 44M2D37M1I17M 71/98 72.4% 99/94230402 0.0% 3/98 3.1% 89912414 NA +3087 chr4 + 190214555 98308205 98308204 98308283 79 CGTGTATATAGGTATATACATATATGTGCATATATGTGTATATACATGTATATATACACACACACCCACACACATATAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:...:.:..x..:.::.:.x.:....::x..:..:.....::x:.::.xx...:..........x....x...:.x.. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 89912418 NA +3237 chr4 + 190214555 98308281 98308280 98308319 39 TATATACACACACACACTATATATATATATATATATATA chr4 - 94230402 71295533 71295532 71295571 22934832 22934831 22934870 39 TATATGCACACACACACTATATATATATGTATGTATATA .....:......................:...:...... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 27012748 NA +3447 chr4 + 190214555 98317931 98317930 98317991 61 CTCCTGGGTTCAACTGATTCTCGTGCCTCAGCTTCCTCAGTAGCTGGAATTACAAGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..........x..x...x.:x.x......:.:::x...........:....x...... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 80120792 NA +3329 chr4 + 190214555 98336983 98336982 98337052 70 CTCCCAGGTTCAAGCGATTCTTATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATCCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.::........:.x...x:.x.x........::.:.........:.:....--.:.x......::.. 54M2D14M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 80139844 NA +3068 chr4 + 190214555 98363474 98363473 98363555 82 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTAGTAATTGTAAAGCCCTGAGAGGGCAAGGGATTTGG-----------TAGAAATTCA chr4 - 94230402 34811112 34811111 34811204 59419199 59419198 59419291 93 GTGTTAAAAAAAAAAAAAAAGAAGAAGAAGAAGTGTTGAAAACATGAATGCTGAAGAAGGCAGAAAACTTTGCTTTCTAGATATAAAAATTCA ..x.:...............:..:..:..:......x.x..x::.:..xx.:x:...:....::::.:..x.-----------..:....... 72M11I10M 57/82 69.5% 93/94230402 0.0% 11/82 13.4% 63552362 NA +3022 chr4 + 190214555 98438565 98438564 98438611 47 TCCATATATATATATATATATATATCTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735354 92735353 92735400 1495003 1495002 1495049 47 TCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG ..:....:...:..:.:........x......:.x.........:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 5703211 NA +3470 chr4 + 190214555 98438681 98438680 98438739 59 CTCCAGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.x...........x...x..x.x........::.:.........:.:....x:... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 80241542 NA +3738 chr4 + 190214555 98457424 98457423 98457508 85 AAGATTCCATCTCAAAAAAACAAACAAACAAAACAACAACAACAAAAAAAAAAGAAAAAAAAACACACACACACACATGCACACA chr4 - 94230402 52796001 52796000 52796084 41434319 41434318 41434402 84 AGGATTTTATGGCAAAAATATAAAGGAAAAGGA-AACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCA .:....::..xx......x.:...x:..x.::.-................:.:::....x.x...:...........x::..x.. 33M1D51M 61/84 72.6% 84/94230402 0.0% 1/84 1.2% 45661423 NA +3387 chr4 + 190214555 98457428 98457427 98457487 60 TTCCATCTCAAAAAAACAAACAAACAAAACAACAACAACAAAA---AAAAAAGAAAAAAAAAC chr4 - 94230402 70931650 70931649 70931712 23298691 23298690 23298753 63 TTCAACTTTAAAAAGAGAACAAAACAAAACAACAACAACAAAAACTAAAAAAGTAAAAAAAGC ...x.::.:.....:.x..xx......................---.......x.......:. 43M3I17M 50/60 83.3% 63/94230402 0.0% 3/60 5.0% 27525778 NA +3399 chr4 + 190214555 98457435 98457434 98457480 46 TCAAAAAAACAAACAAACAAAACAACAACAACAAAAAAAAAAGAAA chr4 - 94230402 16389362 16389361 16389407 77840996 77840995 77841041 46 TCAACAAAACAAACCAACCAAACAACAACAACAAAAAAAGAAAAAA ....x.........x...x....................:..:... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 82068073 NA +3612 chr4 + 190214555 98457437 98457436 98457490 54 AAAAAAACAAACAAACAAAACAACAACAACAAAAAAAAAAGAAAAAAAAACACA chr4 - 94230402 65284690 65284689 65284743 28945660 28945659 28945713 54 AAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACAAAAAAAGGCA ................................x...x.x.x.x.......x:.. 54M 47/54 87.0% 54/94230402 0.0% 0/54 0.0% 33172747 NA +3204 chr4 + 190214555 98457438 98457437 98457487 50 AAAAAACAAACAAACAAAACAACAACAACAAAAAAAAAAGAAAAAAAAAC chr4 - 94230402 38453258 38453257 38453307 55777096 55777095 55777145 50 AAAAAACAAACAAACAAAACAACAATAACAAAAAACAGTTACAGTAAAAC .........................:.........x.:xx.x.:x..... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 60004180 NA +3262 chr4 + 190214555 98494451 98494450 98494524 74 ATCGCACTTACTACCTGTGTCATCTTAGGCAGATTACCTCATCTGCCTAAGCCTCAATTTCTGTATCTGTGAAA chr4 - 94230402 11947201 11947200 11947274 82283129 82283128 82283202 74 ATTGTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAA ..:.:x..:....x......x.:......:x::.:..:.x........:x.:.:..:....:x:..x.:..... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 86547250 NA +3007 chr4 + 190214555 98541679 98541678 98541719 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAGGAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............:.................:x.:x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 10865332 NA +3058 chr4 + 190214555 98541680 98541679 98541719 40 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAGGAAA chr4 - 94230402 48383086 48383085 48383125 45847278 45847277 45847317 40 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGGCAA ................:.............x.:....x.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 50158594 NA +3189 chr4 + 190214555 98541681 98541680 98541720 40 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAGGAAAA chr4 - 94230402 87676347 87676346 87676386 6554017 6554016 6554056 40 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAA ..................................x:.x.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 10865334 NA +3060 chr4 + 190214555 98541682 98541681 98541719 38 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAGGAAA chr4 - 94230402 37597028 37597027 37597065 56633338 56633337 56633375 38 AAAAAAAAAAAAAAGAGAGAGGGGGAGGGAGAAAGAAA .....................:.:...:.....:.... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 60944654 NA +3049 chr4 + 190214555 98549247 98549246 98549322 76 GTGTGAGAAGGTATCTCATTGTGGTTGTTTTATTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTGTTTTTTTTGA chr4 - 94230402 15882784 15882783 15882859 78347544 78347543 78347619 76 GTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTGTTAA .....x:x.x:...x.x......x.x.....x..:..........xx........xx.xx.....x:....x..:. 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 82666463 NA +3086 chr4 + 190214555 98549277 98549276 98549328 52 TATTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTGTTTTTTTTGAGGCAGA chr4 - 94230402 25965651 25965650 25965702 68264701 68264700 68264752 52 TGTTTTTGCTGGGTTTTTTGCTTTTGTTTTTTTGGGTTTTTTTTGAAGCTGA .:......:.x.x..x....:............xx...........:..x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 72583626 NA +3361 chr4 + 190214555 98572049 98572048 98572120 72 CTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGCGATTAC-----CACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.:...........x...x..x.x........::..........x:.:...-----...... 66M5I6M 54/72 75.0% 77/94230402 0.0% 5/72 6.9% 80374923 NA +3036 chr4 + 190214555 98590710 98590709 98590772 63 AAAAAAAAAAAAAAGAGAGAGAGAGAGATGAATTAACTTGTCCGAGGTCACAGTGCTGATCAG chr4 - 94230402 67652106 67652105 67652167 26578236 26578235 26578297 62 AAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATTG-CCAAGAGCAAAGCCCTACTGAG ............:...............x:.....:x...-..:..:x..x..:x..:x.x.. 40M1D22M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 30938604 NA +3013 chr4 + 190214555 98677308 98677307 98677355 48 AAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAAGAAAAGAAATACAG chr4 - 94230402 28297990 28297989 28298037 65932366 65932365 65932413 48 AAAAAAAACAAAAAAAAAAAGCAAGGAGATAACAGAAAAAAATTACAG ........x............x..:..:.x..x......:..x..... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 70379318 NA +3162 chr4 + 190214555 98736570 98736569 98736678 109 AGAAAGAAAGAGGAAATAAAATAAAATAAAAGAAGGAAAGAAAGAAAAGAAGGAGAGAGAAAGAGAGAGCAAGAAAGAGGGAAAGAAAGAAAAAACACTAAAGACTTCA chr4 - 94230402 91538061 91538060 91538169 2692234 2692233 2692342 109 AGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGGCACAGAGCACTGCA .........x.:::..x.....:x.x.:x...x..:...x.x.....::..x.:.::xx..xx...:.....xx..x:.:.:....:::.::.::...x:.:x...x.. 109M 66/109 60.6% 109/94230402 0.0% 0/109 0.0% 7198509 NA +3315 chr4 + 190214555 98753922 98753921 98753993 72 CTGCATGCTGCATCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..xx.::x.x..:.........x.:xx...x.xx.x........:............:......x.:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 80556796 NA +3300 chr4 + 190214555 98782993 98782992 98783070 78 TGTATTCACACATATATGTGGCTGTACACACATACACACACACACGTACACAGAGAGAGAGAGAAAGAGACAGAGACG chr4 - 94230402 33398810 33398809 33398877 60831526 60831525 60831593 68 TGTATTTAGAAGTGTGCGTGTGTGTATACACATATA----------TACACAGAGAGAGAGAGACAGAGATAGATAtg ......:.x.x:.:.::...xx....:.......:.----------..................x.....:...x.:. 36M10D32M 53/68 77.9% 68/94230402 0.0% 10/68 14.7% 65384183 NA +3039 chr4 + 190214555 98787596 98787595 98787652 57 GGGTTTTTTGGTTTTGGTTTTGGGATTTTTTTTTTTTTTTTTTTTTTTTTGGTCATT chr4 - 94230402 54772374 54772373 54772430 39457973 39457972 39458029 57 GGTTTTGTTGGGTTTTGGTTTGGGTTTTTTTTTTTGTTTCTTTGTTTTTAAATCATT ..x...x....x...x.x......x..........x...:...x.....x::..... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 44015222 NA +3047 chr4 + 190214555 98788986 98788985 98789040 55 GCAAGACTATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACGTCTGGACAG chr4 - 94230402 79055184 79055183 79055238 15175165 15175164 15175219 55 GCAAGGCTTTCTAAAAAAAAAAAAAAAAGTAAAAAAGCATGATACACTTGGAGAG .....:..x...................:x......:x.x:.:..:::....x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 19733802 NA +3066 chr4 + 190214555 98828482 98828481 98828568 87 GGGGAAGGCTCCAGGGTGGTTCTTAAAAAAATAAAGAAAGAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGAAAGAAAGAA chr4 - 94230402 93378343 93378342 93378429 851974 851973 852060 87 GGAGAAAGTCCCCAAGGGGAGATTAAAAATAAAAACCCACAAAACGAGAGGAGAGGAACAAAAAGAAAGAAGAAAGGAAAGGACAAA ..:...:.::..x::.x..xxx.......x.x...xxx.x..:.x:::....:..:..x......:.....::........:.x:.. 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 5450139 NA +3046 chr4 + 190214555 98828504 98828503 98828632 129 TTAAAAAAATAAAGAAAGAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 18962278 18962277 18962398 75268005 75268004 75268125 121 TTAAATGAATAACTAAAAAG--AGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGA------GAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAA .....x:.....xx...:.:--.:..x.:.:x...x...x..xx::....:....xx...:x:......------...x.::...x...:....x:.xx::x..x....:.....x....x...::x.. 20M2D47M6D54M 79/121 65.3% 121/94230402 0.0% 8/121 6.6% 79866226 NA +3649 chr4 + 190214555 98828517 98828516 98828664 148 GAAAGAAGAAAGAAGGAAAGAAAG---AAAAAGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG-AAAAAGAAATATTAATGTCCCTCTC chr4 - 94230402 72821453 72821452 72821604 21408799 21408798 21408950 152 GGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAGTTCTTTTC .::.:.:.x......:....x.::---:x.:x.:.:xx...::.....................x::xxx.x.::..::..::::.:..xx.:xxx:........::.x.:..x.....::.xx..-......:..x..x..x..:.:.:.. 24M3I99M1I25M 90/148 60.8% 152/94230402 0.0% 4/148 2.7% 26007064 NA +3769 chr4 + 190214555 98828520 98828519 98828638 119 AGAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA---AAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 18943159 18943158 18943280 75287123 75287122 75287244 122 AGGAAAAAGGAGGAATTAAAGAAAAATGAAAATACAGTGAGGTGAAGTAAGGAGACGAAAAAGGCAAAATAGAATAAGCACATTAAAATGAGAGGACTGAGAGCAAAGGAAAGGGAAGAAAA ..:.:....:.....xx.........x...:.x.x.:x..::x:...x..:..:.x:..:..::x....x.:..x..:x:x.xx:...x..:.:..---.:..x....:....::....... 96M3I23M 77/119 64.7% 122/94230402 0.0% 3/119 2.5% 79885361 NA +3461 chr4 + 190214555 98828521 98828520 98828668 148 GAAGAAAGAAGGAAAGAAAGAAAAAGGAAGAAAGAAGGAAAGAAAGAA--AAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAATATTAATGTCCCTCTCTTCC chr4 - 94230402 18962272 18962271 18962419 75267984 75267983 75268131 148 GAAGAATTAAATGAATAACTAAAAAG--AGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAAGTGCTACTGCTTCTGGGTTCC ......xx..:x:..x..xx......--..:.x....x:..x:..x..--::....:..:.xx.:::x..:..:....x.::...x...:....x:.xx::x..x....:.....x....x...:.x..:.::..x..:::..xxx.... 26M2D20M2I100M 91/146 62.3% 148/94230402 0.0% 4/146 2.7% 79866249 NA +3079 chr4 + 190214555 98828525 98828524 98828608 84 AAAGAAGGAAAGAA-----AGAAAAAGGAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 31350830 31350829 31350918 62879485 62879484 62879573 89 AGGGAATGAAAGGATAACTAAAATACGGAAGAAAATACAACAGGAAGAATTGAAGAGGTGGAAGGAAAAGCAAGGAAAGGAAAATAAAA .::...x.....:.-----.:..x.x........:x.x:.x..:.....xx...::::x.:..:......x..:....:.....x.... 14M5I70M 58/84 69.0% 89/94230402 0.0% 5/84 6.0% 67477695 NA +3052 chr4 + 190214555 98833276 98833275 98833325 50 TATATATACATATATATATACACACACACACACAAATAATCTATTATATA chr4 - 94230402 60979371 60979370 60979420 33250983 33250982 33251032 50 TATATATACACATATATACACACACACACAAAAAAAAACCCTACTGTGTA ..........:.......:...........x.x...x.x:...:.:.:.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 37853905 NA +3144 chr4 + 190214555 98835006 98835005 98835197 192 AAGAAAGAGAGACAGAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAGGAAGGAAGGAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-----AAAGAAAG---------------AAAATATATATTTTACTGAT chr4 - 94230402 11998630 11998629 11998841 82231562 82231561 82231773 212 AGGTAAGTGGTACGAACAAAAAGAATGGGAGATGGATGAGTACTGTGTCAGGGAAGTAAGACTGAAAGAAGCACAAGGGTCATAAAAGACATGAAGTGAAGAATAAAAGAAGGGATAAATAACACCACATAGGAAGGAGCAAGGACAAAGACAATGGAAAAAAGGTGAAAAAGAAAGTGAAGAGTATGAGAAAAAGTAGAAATTTAATTGAT .:.x...x.:x..::.x.:....:.x..:..:x:.:x::.x.xx:x.xx...:.:.x.:..xx...::.:.x.x:.:..xx:x...::.x.x...:x...::.x...::...:..x...x..x:xx.x.x..:...:.:x..:..x.:.:.x..x.:..:....-----........---------------...:..x.x....x.:.... 164M5I8M15I20M 112/192 58.3% 212/94230402 0.0% 20/192 10.4% 86836376 NA +3287 chr4 + 190214555 98835041 98835040 98835120 80 GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAGGAAGGAAGGAAAGAAAAAG-AAAAGAAAGAGAAAGAAAGAGA chr4 - 94230402 36691893 36691892 36691973 57538430 57538429 57538510 81 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA .:....:...:....x:.......::.::.x:.x:.:........:...:x...:...-.....x..x.:.xx::...... 58M1I22M 55/80 68.8% 81/94230402 0.0% 1/80 1.2% 62143148 NA +3079 chr4 + 190214555 98835078 98835077 98835136 59 AGGAAGGAAGGAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAGAAA---AAGAAAGAAAGAAA chr4 - 94230402 42895016 42895015 42895077 51335326 51335325 51335387 62 AGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAA .....:........:..........:.x.:...:....x.....x---:.....xx.:.... 45M3I14M 47/59 79.7% 62/94230402 0.0% 3/59 5.1% 55940062 NA +3355 chr4 + 190214555 98835080 98835079 98835159 80 GAAGGAAGGAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 7739260 7739259 7739339 86491064 86491063 86491143 80 GAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAA ..:....::.x...::::.::::....:.:..............x.x.:..::.:..xxxx....:...:...:...:.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 91095820 NA +3562 chr4 + 190214555 98835082 98835081 98835212 131 AGGAAGGAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAGAAAAAG--------------AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----AGAAAGAAAGAAAGAAAATATATATTTTACTGATCCATGAAGTATAATA chr4 - 94230402 30533168 30533167 30533316 63697087 63697086 63697235 149 AAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCA-CATTTAAATATAATA .::......::..:..:.:.:.::.........xx.x.......--------------.....xx....x.:.::..x:.:....:.....:.:..-----::..:..:..:..x...:.x.:.:xxx....x.-.xx.x..:....... 44M14I38M5I33M1D15M 87/130 66.9% 149/94230402 0.0% 20/130 15.4% 68301914 NA +3040 chr4 + 190214555 98835097 98835096 98835168 72 AGAAAAGAAAGAGAAAGAAAGAGAAAAAGAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 7711334 7711333 7711406 86518997 86518996 86519069 73 AGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ......xx.:.:.xx.:..:x...........:...:.......:..x-....x..:::.:.:.:.:...... 48M1I24M 51/72 70.8% 73/94230402 0.0% 1/72 1.4% 91123763 NA +3010 chr4 + 190214555 98850856 98850855 98850915 60 GGAGGGAGGGACGGAGGGAGGAAGGCAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 33640811 33640810 33640870 60589533 60589532 60589592 60 GGATGGATGGACAAGTGGGTGAGGGCAAGCAGGAAGCAAGGAAAGAAAGGAGGAATAAAG ...x...x....:::x..:x..:....:.x......x......:...:.:.....x:... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 65210045 NA +3085 chr4 + 190214555 98850931 98850930 98851022 92 GGAAGGAAGGAAAGAAGGGAGGAAGGAAAGAAGGGAGGAAGGAAGGAAGGAAAGAAGAAAGGAAGGAAGGGAGGGAAGGGAGAGGAGGGGAG chr4 - 94230402 5084196 5084195 5084287 89146116 89146115 89146207 92 GGGGGAGAAATGAGAAGTGAGGGGGGAATACTGAAACAGAGGAAGCCATGGGAGAGGGCAGAAAGGAAGGGAGGGAATTGACAGTCAGGGAG ..::.::.::x:.....x....::....x:xx.::.x::......xx.x.::...:.:x..:...............xx..x..xx:..... 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 93766735 NA +3316 chr4 + 190214555 98851027 98851026 98851086 60 GAAGGAAGGAAGGAGGGGAGGGAGGAAGGATAAAGAAAGAAAGAGAAAGAAAGAGAAAGA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ...:...:..x..:....:...:...:..:x:.....::.....:.......x.x...:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 21664950 NA +3806 chr4 + 190214555 98851058 98851057 98851160 103 AAAGAAAGAAAGAGAAAGAAAGAGAAAGAGAGAAAGAGAAAGAAGAACAAGAAAAA------GAAAGAAAGAGAAAGAAAGAACAAGAAAA---------AGAAAGAAAGAAAGAAAG chr4 - 94230402 72526230 72526229 72526347 21704056 21704055 21704173 118 AAAAATGGAAAGAGAAAAAAATAGAATATTTGAGAGAGCAAGGCAGACAGGAAAAACAGTCTGAAAGAATCAGAAAGAAAAAAGAAGAGGAACTAGCTGCAAAAAAGAAGAGAGACAG ...:.x:..........:...x....x:xxx..:....x...:x::...:......------.......xx.........:..x....::.---------.:...::....:...x.. 56M6I29M9I18M 75/103 72.8% 118/94230402 0.0% 15/103 14.6% 26324828 NA +3657 chr4 + 190214555 98851058 98851057 98851179 122 AAAGAAAGAAAGAGAAAGA----AAGAGAAAGAGAGAAAGAGAAAGAAGAACAAGAAAAAGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAAGA--AAGAAAGAAAGAAAAGAAAGAAAGAAAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATA-AGTAGGAGATAA-AAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .::......:.x.x...x.----....x.....:.:x.......:....x.xx...x.........x.-..x.:..:.x..-...:....x.....--x.x...:.:...x.x.x:.::....:.... 19M4I45M1D12M1D14M2I30M 87/120 72.5% 126/94230402 0.0% 8/120 6.7% 53495646 NA +3374 chr4 + 190214555 98851086 98851085 98851175 90 AGAGAAAGAGAAAGAAGAACAAGAAAAAGAAAGAAAGAGAAAGAAAGAACAAGAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAA chr4 - 94230402 22088979 22088978 22089067 72141336 72141335 72141424 89 AGAGAAAGAGAAAGAAAACCAAGCATAACAGATAAAGAACAATGTAGAGT-GGAAAAAGAAACACTATAACAAAAGAACAAAAGAAAAAA ................:.x....x.x..x.:.x.....:x..x:x...::-:..........x.xx:x..x...::..x:.......:.. 50M1D39M 63/89 70.8% 89/94230402 0.0% 1/89 1.1% 76762107 NA +3196 chr4 + 190214555 98857598 98857597 98857636 39 CCCTGTCTCTAAAAATACACACACACACACACACACACA chr4 - 94230402 61752018 61752017 61752056 32478347 32478346 32478385 39 CTCTGTCCCTAAAAATACACACACACACACGCACATACA .:.....:......................:....:... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 37105580 NA +3339 chr4 + 190214555 98863280 98863279 98863362 83 TTTATAGAGTCAGCCCAAAACAATAATTTTATTTTATTATTACACATAGTTTCATTATTTTAAAATAATGAAATCAAAATAAT chr4 - 94230402 2779469 2779468 2779551 91450852 91450851 91450934 83 TTTTTAGAGCAACCTCATAACAACATTTTCCTTTTATTATGATGCATAATCCCATTATATCAAACAAATAACAGAAAAAAAAT ...x.....:x.x.:..x.....:.x...:x.........x.::....:.::......x.:...xx...:.x.xx....x... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 96083811 94130744 +3648 chr4 + 190214555 98874834 98874833 98874941 108 GCAGGCT---GGAATGCAGTGGCATGATCTCAGCTCACTGCAGCCTCTGCCACCCGAGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCAC chr4 - 94230402 18197090 18197089 18197199 76033204 76033203 76033313 110 GCAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .......---..x.::..x:x..x..::x...xx.:-..:.....:xx:x.x:.:.:.........x...x..x.x........::.:.........:.:....x.:.... 7M3I26M1D74M 73/107 68.2% 110/94230402 0.0% 4/107 3.7% 80677744 NA +3162 chr4 + 190214555 98917084 98917083 98917147 64 ACACACACACACACACACACACACACACACACACACACACACACACACACAAAAAAAACCCAAA chr4 - 94230402 8395818 8395817 8395881 85834522 85834521 85834585 64 ACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAA ...:.:::.::.x:...:xx.:.................x.....x.::x.x............ 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 90521266 NA +3304 chr4 + 190214555 98919303 98919302 98919353 51 CAAAACAAAAACAGAAACAAAAAGACTAGCAAAAAAAAAAAAAACAAAAAA chr4 - 94230402 48238948 48238947 48238998 45991405 45991404 45991455 51 CAAAACAACAACAAAAAAGAACAAACTAGCAAAAAAAAAAAAAACACATAA ........x....:...x:..x.:......................x.x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 50680355 NA +3048 chr4 + 190214555 98924569 98924568 98924612 44 AAATGAAGTGTGAAATTTGTTTCTGTTTTTTTTTTTATTCTTTT chr4 - 94230402 47134455 47134454 47134498 47095905 47095904 47095948 44 AAGTGAAATGTGAAATTTCTTTCTTTTTTTTTTTTTTTCCTTTT ..:....:..........x.....x...........x.:..... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 51790114 NA +3030 chr4 + 190214555 98927628 98927627 98927701 74 CTGGGCGACAAAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTTTAAAAGTCAA chr4 - 94230402 6416838 6416837 6416911 87813492 87813491 87813565 74 CTAGGTAACATAGAATTTCTATAACCAAAAGGGGAAGGGGAAAAAAAAAAAAAAAAAAAGGCTTTAAAAGGTAA ..:..::...x..x.xxx..x:.x.:x...::::..::::....................x.........x:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 92510790 NA +3120 chr4 + 190214555 98927641 98927640 98927726 86 CAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTTTAAAAGTCAAAGCAAACTGG--------TAAACCA-TTAGCAAA chr4 - 94230402 72836470 72836469 72836560 21393843 21393842 21393933 91 CAGTACTCCCTC----AAAAAAAAAACAAAAAAACAAAAAAGAGCAGTTTATAAAGATCAAGACAAAAGGAGAAGTTTCTAAACCAGTCAGCAAA ..:x.....x..----..........x.......x......:.:x...:.x....::....::....xx.:--------.......-.:...... 12M4D55M8I7M1I8M 64/82 78.0% 91/94230402 0.0% 13/82 15.9% 26091171 NA +3050 chr4 + 190214555 98932173 98932172 98932225 53 GGACATCGCGCCACTGCACTCCCTCAGTCTCAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 52964860 52964859 52964912 41265491 41265490 41265543 53 GGACTTTCAGTCGCTGTCCTCCCCCTGCCTCAAAAAAAAAAAAAGAAAAAAAA ....x.:xx.:.:...:x.....:.x.:................:........ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 45967313 NA +3173 chr4 + 190214555 98953046 98953045 98953161 116 CTCACCTTCTGGAACCAGAATGTCTGATTGTGTCTGTTGCTTACCATCTGTGTGCCCTTGGACTTCTTTTTTCTCTCTCTCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 17388674 17388673 17388784 76841619 76841618 76841729 111 CTCAACTACTGAAAATAGAAAGCATAGCCTGGTTTAATAT-----ATCTCTGTCTCCGCAAAATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCT ....x..x...:..x:....x.:x.::::xx..:.:x.::-----....x...x:..x:::.x.:.:...:xx.............:...::........:::..:..x.:..::. 40M5D71M 68/111 61.3% 111/94230402 0.0% 5/111 4.5% 81564372 NA +3865 chr4 + 190214555 98953239 98953238 98953304 66 CTTTTGGGTTCAAGTGATTCATATGCCTCAGCTTTCCAAGTAGTTGGGATTACAGGCACGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...:............x....:.x.x......:..:.......:...:.:....--.::....... 54M2D10M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% 80756100 NA +3272 chr4 + 190214555 98986003 98986002 98986085 83 CTGCAGCCTCAACCTCCAGGGTTCAAGTAATCCTCCTGATTCAGCCTCCCCTGTATCTGGGACTACAGGCATATGCCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..x..:.x..........:x.:.x.xx.::.......::.xx...x....:......--.:.:::.....:.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 80788877 NA +3017 chr4 + 190214555 98992020 98992019 98992058 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 29554281 NA +3258 chr4 + 190214555 98992022 98992021 98992073 52 AAAAAAAAAAAAAAAATATATATATATATATATATATATATCTCCTAAGTAA chr4 - 94230402 69437739 69437738 69437790 24792613 24792612 24792664 52 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAA .........x......x.:x...................x.:x.x....... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 29554283 NA +3596 chr4 + 190214555 98995498 98995497 98995556 59 AGGCAC-CGCCGGCGGGGGGCGGGGCGAAGCCGGCGGGGCGGGGCACCAGCTGCGCGCGC chr4 - 94230402 93964914 93964913 93964972 265431 265430 265489 59 AGGCACGCGCCGGCAGGGGGCGGGGCGAGGCGTGCGGGGCGGGGC-CTGGCTGCGAGCAC ......-.......:.............:..xx............-.::......x..:. 6M1I38M1D14M 50/58 86.2% 59/94230402 0.0% 2/58 3.4% 5030584 NA +3015 chr4 + 190214555 98998521 98998520 98998574 54 TCAAGAAAAAAACAAAAACAAAACAAAACAAAAAACCAAAAAGAAGAAATTAGG chr4 - 94230402 33763954 33763953 33764007 60466396 60466395 60466449 54 TTAGGGAAAAACAAAAAACAAAACAAAACAAAAACCTAAACAGATGAAGTGAAG .:.:.:.....xx.....................x.:...x...x...:.x.:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 65234567 NA +3429 chr4 + 190214555 99000647 99000646 99000719 73 AAGAAAGTCTTTTTTTTTTTTTTTTTTAAATAACAAGACAGTTTTTCTTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 70081419 70081418 70081488 24148915 24148914 24148984 70 AAAATACTTGTCTTTTTTTTTTTCTTCCACTCACA---CAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTT ..:.x.x.:x.:...........:..:x.x.x...---....xx..:..:....................... 35M3D35M 55/70 78.6% 70/94230402 0.0% 3/70 4.3% 28919228 NA +3068 chr4 + 190214555 99000668 99000667 99000719 52 TTTTTTAAATAACAAGACAGTTTTTCTTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 86355138 86355137 86355189 7875214 7875213 7875265 52 TTTATTTAATTCCAAGACCTTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTT ...x..x...xx......xx.:.:.::......................... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 12645530 NA +3135 chr4 + 190214555 99042065 99042064 99042105 41 GTTTTATAGGTAAGGAAACTGAGGAAGAGAGAGGTTAATTA chr4 - 94230402 45675955 45675954 45675995 48554408 48554407 48554448 41 GTTTTGTGGGTGAGGAAACTGAAGAAGACAGAGGTTAATTA .....:.:...:..........:.....x............ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 53366110 NA +3187 chr4 + 190214555 99063436 99063435 99063492 57 CTCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAGTATTAACTTCTTTTT chr4 - 94230402 9178218 9178217 9178274 85052129 85052128 85052185 57 CTCATATTAAAAAAAAAAAAAACAAAGAAAGAAAAATCCCAGCTTCCACTTCTGTTT .....x.:..............x...:...:.......xx..:x.:x......x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 89885218 NA +3078 chr4 + 190214555 99102191 99102190 99102253 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACCAAAAAACGTAGTATCTAAA chr4 - 94230402 16697012 16697011 16697072 77533331 77533330 77533391 61 AAAGAAAAAGGAGCAAAGAAAGGGAAAAAAAAAAAGAATAAACCAAAAGA--TAGAATCCCAA ...:.....::.:x...:...:::..............x.........:.--...x...:x.. 50M2D11M 47/61 77.0% 61/94230402 0.0% 2/61 3.3% 82405179 NA +3081 chr4 + 190214555 99111226 99111225 99111278 53 TCTCTCTCTCTCTCTGTGTATATTTGTATATATACGTATATATATATACACAT chr4 - 94230402 83887440 83887439 83887492 10342911 10342910 10342963 53 TCTTTCCCTTTCTCTGTGTATGTATGTATATATAAGCTTTTATACATATATAT ...:..:..:...........:.x..........x.:x.x....:...:.:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 15223786 NA +3269 chr4 + 190214555 99111249 99111248 99111323 75 TTGTATATATACGTATATATATATACACATATATATGTATATATATACCTATGTATATATACGTATATATACATA chr4 - 94230402 37363039 37363038 37363112 56867291 56867290 56867364 74 TTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA ....:..:....x.:......:..:....x......xx:.:.....::x.......x:.:..::.-....::... 65M1D9M 53/74 71.6% 74/94230402 0.0% 1/74 1.4% 61748210 NA +3493 chr4 + 190214555 99111286 99111285 99111361 76 TATATATATACCTATGTATATATACGTATATATACATAGGTATATATGTGTATATATACACATGTATATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTT--GTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:.:..:....:.--.......:.:.:.:.x...:..x...:...........:...x....:::.-......... 13M2D51M1D9M 56/73 76.7% 73/94230402 0.0% 3/73 4.1% 61748246 NA +3194 chr4 + 190214555 99111314 99111313 99111391 78 TATATACATAGGTATATATGTGTATATATACACATGTATATATGTATATATACGTATATATATACATAGGTATATATG chr4 - 94230402 48167038 48167037 48167114 46063289 46063288 46063365 77 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT-GGTAAATGTG .:....:..x.x:........:....x.:.:.....x.:..:..:x:...:..:.:..:.:..::..-....x..:.. 67M1D10M 53/77 68.8% 77/94230402 0.0% 1/77 1.3% 50944276 NA +3108 chr4 + 190214555 99111347 99111346 99111421 75 ATGTATATATGTATATATACGTATATATATACATAGGTATATATGTATATATATGTATATATATACACTACACAC chr4 - 94230402 19637122 19637121 19637194 74593209 74593208 74593281 73 ATGGATAAATGCATATAAA--TTGATATATACATATCTATCTATGCATGTTTATGCATATGCATACCCCAAACAC ...x...x...:.....x.--.xx...........xx...x....:..:.x....:....::....x.:.x.... 19M2D54M 55/73 75.3% 73/94230402 0.0% 2/73 2.7% 79474225 NA +3291 chr4 + 190214555 99113997 99113996 99114087 91 ACCTAGGTGTACCAATATTTTTTGCCACACTTACTTT----CTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA-CATATTTTTTTGCA chr4 - 94230402 51342031 51342030 51342122 42888281 42888280 42888372 92 ACCTAGTTCTGTTTATCTTTT----CATATGTACTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCACCATATCCTATTTCA ......x.x.:::x..x....----..:.:x......----....x.........................xx..x..x..-.....::.x..x.. 21M4D12M4I40M1I14M 68/87 78.2% 92/94230402 0.0% 9/87 10.3% 47771966 NA +3279 chr4 + 190214555 99196270 99196269 99196433 164 AAGGAGGCTGAGGTGGGAGGATCGCTTGAGCCTGGGA--------GGTCAAGGTAGCAGTGAGTCGTGAGCATGCCACTATACTCTAGCTCTTTTGAGACACAGCAAGACCCTGTCTCAAAA--------AAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAAAAAACCAAAACACACTC chr4 - 94230402 32354162 32354161 32354320 61876083 61876082 61876241 159 AAGGAGGCTGACACTGG----CCCCCTGAGTGTGCAGTCTCCCTTGTTCTGAGCAGCAGCGAGGCAT-------------TGCTCCAGTTGCTTAGAAACACCTTTAGA----ATTTTAAAATTATGCTCAGTGGAAAAAAAAAAAAGAGAGGAAAAAAAGAGAAGGTCAGATCACACTC ...........x::x..----:.x.:....:x..x::--------.x..x::.:.....:...x.:.-------------.:...:..:.x:..x..:....xx:x...----:.:.:....--------.:x::..............:.:..........:..:::..:.x....... 17M4D16M8I22M13D29M4D9M8I50M 97/143 67.8% 159/94230402 0.0% 37/143 25.9% 66842108 NA +3031 chr4 + 190214555 99211087 99211086 99211165 79 AGAGAAATTTGTTTTATACTTTTAGTTAAAAACCTTATGAAGATTTAGTTTCTTCTATTTTATTTATTTTTATTTTTTT chr4 - 94230402 51567911 51567910 51567989 42662414 42662413 42662492 79 AGAAAATATTACTTTATCCTTGTAGCTAAGTTCATCATTAACAACTAAATTATTATGTTTTACTTGTTTTTGTTTTTTT ...:..xx..::.....x...x...:...:xx.x.:..x..x.x:..:x..x..x.:.....:..:.....:....... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 47643176 NA +3102 chr4 + 190214555 99212713 99212712 99212765 53 ATATATATATATACACACACATATATGTGTATATATATATTTCTTTAAATTAG chr4 - 94230402 66528062 66528061 66528114 27702289 27702288 27702341 53 ATATATATATATACACACACACTTGGGAATATATGTATATTCCTAGAAATCAG .....................:x.:x.x:.....:......:..xx....:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 32684651 NA +3105 chr4 + 190214555 99262997 99262996 99263075 79 TTTTTTTTTTTTTTTTTTTTGATGTTGATGCTATTCCTTTCTGTCTGTTAGTTTTCCTTCTTACAGTCAGGGCCCTCTG chr4 - 94230402 70027986 70027985 70028064 24202339 24202338 24202417 79 TTTTTTTTCTTTTTTTCTTTGGTGTTGGTGTTCTTCCCTTCTTCCCTTTCCTTTCCAGCCATATACTAGGGAGATTCTG ........:.......:....:.....:..:.x....:....x:.:x..xx...:.xx:.x..:.x.x:..:xx:.... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 29235011 NA +3116 chr4 + 190214555 99288342 99288341 99288397 56 TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTATACACTCAGACCTACACATACATA chr4 - 94230402 25393260 25393259 25393315 68837088 68837087 68837143 56 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTA ......::.....:.......:.x........:....x..x..x:....:.x.x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 73895082 NA +3060 chr4 + 190214555 99303182 99303181 99303235 54 AGGTTCCTGAATGATCCAGTAAGAAAAACATTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 88354360 88354359 88354413 5875990 5875989 5876043 54 AGGATCTTGAATGGTCTACAAGAAAAAACTCTTTTTTTTTTTTTTTTTGTTTTT ...x..:......:..:.xx.::......x:..:..............x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 10948822 NA +3102 chr4 + 190214555 99305541 99305540 99305616 76 TGAACCACTTGCCCCATAGTGTATATATATATATATATATATATATATATATATATATATATATATATACAATCAC chr4 - 94230402 37363023 37363022 37363098 56867305 56867304 56867380 76 TGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCAC ....xx.x....xx...x.....:...:x.:......:..::.:.x......xx:.:.....:.:...::.x.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 61942518 NA +3108 chr4 + 190214555 99342010 99342009 99342062 53 CAAAAAAAAAAAAAAAATAAATAAATAAATAAAATAAAATAAAAAAGGGGGCT chr4 - 94230402 53293872 53293871 53293924 40936479 40936478 40936531 53 CAAAAAAAAAAAAAAAGTGAATGAATAAATAAATAAAAATGGAGAAAGCAACT ................:.:...:..........xx.....::.:..:.x::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 46048138 NA +3110 chr4 + 190214555 99358401 99358400 99358457 57 TATTCATTTCACTTTGACATTGAAACCAAAGTTGGTGAGAGAGTTAAAGTTGTCTCC chr4 - 94230402 29754053 29754052 29754109 64476294 64476293 64476350 57 TATCAATTTTATTTTGACATTAAAGCCAAAGTTGTAGAGAGTTTTAAAGCATTCTCC ...:x....:.:.........:..:.........xx.....xx......:xx..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 69604348 NA +4228 chr4 + 190214555 99506382 99506381 99506772 391 TTTCTCCCTTCCTCC-------CTCCCTTCCTCCCTCCCTTCCTCCCTTCTTTCCTTTCTTTCTCTCTTTCTCTCTCA-----CTTTCTTTCTTTC------TCTTTCTCTCTCTTTTTTCTCTCTCCCTTT---------------------------CTTTCTCTTTCTCTTTCCCTTCCTTACT----TCCTTCTCTTTCTTTCTTTTTTCTTTCTTTCTTCTCTTTCTCTT-TCTTTTCCTTTTTCTTTC--TCATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCTTTTCTTTCTTTCTGTCTTTCTGTCTGTCTTTCTTTCTTTCTTT-------CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTT---------------TCTTTCTTTCTTCTTTCTTTCTTTCTTGATGAGATCTTGCTACATT-----GACTAGACTGGAGTGCAGTGGCTCCT chr4 - 94230402 61332064 61332063 61332531 32897872 32897871 32898339 468 TTTGTCCTCCCCTTCACAAGTATTCTCTTTCTGATTTTCTAGATTTCTTCTTGTTCTTCTT-CTTTTTTTCCCCTTCAAGAAGCTTTTCTAATTACAGTGAATATTTAACTTTTTTTTTTCTC-CTACTTCTGGTAATCTTAACAAATGCATCAAAATACTTTTACTTCCAGTACTCTTTTATTACTAAAATCCTCTTGTTCCTAATCTCTTGAATTTTGATTGCACTGTCTTTTCTCTGTCCCCTTTTTTATCATCCAATCTTTATTTTCCTTCTTCACTTTTTGTCTTTCTTAATTTCCCTTTAATTGTTCCTAGCGTTGATTTTGTCTTCTTTCTCTGAAGTTGTTCTGTTCCATTTCCCCTTTTCTGATTCATTGAAGCCTGAAAAAGATTTGTTTCTCTTTTTTTCTTCTTAGGCTCTGTAATCCTTCTCCACTCTCAGAACTATGGAGGAGCGAGGTGGAGCCT ...x...:::...:.-------:..:...:..xx:.::..xxx.::......x:::.....-..:.:....:.::...-----....::.xx..x.------.x...xx..:.:.........-..x.:.:.---------------------------....:x...:.xx.x::.:..:x.....----....::.x..:..xx::.:..xxx..:.xx:.x.x..x...:..-...x.:..:....:.x..--:..x.:.:.x.:..:...:...x..:..xx........xx...:.:..:xx.:xx..:.xx:..:x:.:..x::........:.-------:.:.x..:.x..::::....::.xx...x..---------------.:.x.:.:....:...::.....xxx:xx..x:...:.x..x..:.-----:....x:xx....:.x:....xx... 15M7I39M1D16M5I13M6I21M1D8M27I28M4I44M1I18M2I84M7I31M15I46M5I26M 236/389 60.7% 468/94230402 0.0% 81/389 20.8% 38174318 NA +3602 chr4 + 190214555 99506440 99506439 99506532 93 TCTTTCTCTCTCACTTTCTTTCTTTCTCTTTCTCTCTCTTTTTTCTCTCTCCCTTTCTTTCTCTTTCTCTTTCCCTTCCTTACTTCCTTCTCT chr4 - 94230402 69667805 69667804 69667897 24562506 24562505 24562598 93 TCTCCTTTTCATCCTTTTTTTTCTGATTTCTCTCTCTCTCTCTCCACCCACCCATACCATTTCCATCTCTTTCCTTTGCTTACTGCTTTGTCT ...:::.:..x:x....:...::.xx.:.:.........:.:.:.x.:.x...x.x.:x.:..:x.........:..x......x.:..x... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 29838635 NA +3511 chr4 + 190214555 99506485 99506484 99506586 102 TCTCTCCCTTTCTTTCTCTTTCTCTTTCCCTTCCTTACTTCCTTCTCTTTCTTTCTTTTTTCTTTCTTTCTTCTCTTTCTCTTTCTTTTCCTTTTTCTTTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTG--TTCCATTTCGATTCTGAACTTCTGTTTCTTTCT---CTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:....:....:..:.:.......:x....:.x.x--....x.:..xx.::.xxx:..:.x.........---..:.....:...x.xx...:........ 36M2D33M3D28M 69/97 71.1% 97/94230402 0.0% 5/97 5.2% 56424557 NA +3331 chr4 + 190214555 99506492 99506491 99506567 76 CTTTCTTTC----TCTTTCTCTTTCCCTTCCTTACTTCCTTCTCTTTCTTTCTTTTTTCTTTCTTTCTTCTCTTTCTCTT chr4 - 94230402 38776925 38776924 38777004 55453399 55453398 55453478 80 CTTTTTTTTAGCTTATTTCTCTTCCTTTTCCTTACTTATTTATCTTCCTTTTCCTCCTCTTTTCTGATTCTCTCTACCTT ....:...:----.x........:.::..........x:..x....:....:::.::.....::.xx......:.x:... 9M4I67M 54/76 71.1% 80/94230402 0.0% 4/76 5.3% 60729567 NA +3868 chr4 + 190214555 99506514 99506513 99506626 113 CTTCCTTACTTCCTTCT--------CTTTCTTTCTTTTTTCTTTCTTTCTTCTCTTTCTC----TTTCTTTTCCTTTTTCTTTCTCATTTTCTTTCTTTCTTTTTCTCTCTTGCTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:....x....x.x..--------..x..::..:....:....:...::....x::...----..:.x....xx..:.xxx::..xx.........:...:.:.....x.x...::........ 17M8I35M4I61M 79/113 69.9% 125/94230402 0.0% 12/113 10.6% 56424614 NA +3017 chr4 + 190214555 99518502 99518501 99518540 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 30080763 NA +3127 chr4 + 190214555 99518502 99518501 99518575 74 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652064 67652063 67652137 26578266 26578265 26578339 74 AAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..:....:x.:.:::..x.x:.:.::..:.x.:...:...:xx.:.:.:.:.:...................:. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 31866438 NA +3005 chr4 + 190214555 99518504 99518503 99518577 74 AAAAAAAAAAAAAAAATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652064 67652063 67652137 26578266 26578265 26578339 74 AAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..:....:x.:.:::.xx.x:.:.::..:.x.:...:...:x:.:.:.:.:.:...................:. 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 31866440 NA +3202 chr4 + 190214555 99518509 99518508 99518554 46 AAAAAAAAAAATATATATATATATATATATATATATAGAGAGAGAG chr4 - 94230402 23993248 23993247 23993293 70237110 70237109 70237155 46 AACAATAAAAGTATATATGTATGTGTATGTATATATAGAGAGAGAG ..x..x....:.......:...:.:...:................. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 75525261 NA +3073 chr4 + 190214555 99518515 99518514 99518571 57 AAAAATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398817 33398816 33398873 60831530 60831529 60831586 57 AGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:..:.:.:::.:.:.:....:.:.......x.x.............x.....x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 66119698 NA +3201 chr4 + 190214555 99598630 99598629 99598692 63 AACAGTATATCCTTCAAGGAAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGTGTTT chr4 - 94230402 54371566 54371565 54371628 39858775 39858774 39858837 63 AAAAGAAAGTCCTCCAAATAAGATTTTTGTTTTGTTGTTTTTTTTTTTTTTCAGACAGAGCTT ..x..x.x:....:...:x...x:....x....x..x..............:......x.:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 45227064 NA +3122 chr4 + 190214555 99601094 99601093 99601155 62 CACCTACATTGAAGAGATACAATTCTTCTGCTGTTAAAGATTTATGTTGAAAACAAAAGCTA chr4 - 94230402 55376192 55376191 55376253 38854150 38854149 38854211 62 CACCTACCTTTGGGAGATGCGATTTTAGTTCTGTTAAATTTTTATCTTGAAAAGAGAAGCTA .......x..x::.....:.:...:.xx.x........xx.....x.......x.:...... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 44224902 NA +3260 chr4 + 190214555 99631655 99631654 99631699 45 ACTCCGTCAAAAAAAGAAAAAAACAAAACAACAACAACAAAAAAA chr4 - 94230402 88287900 88287899 88287944 5942459 5942458 5942503 45 ACTTCATTAAAACAAAAACAAAACAAAACAACAACAACAAAAAAA ...:.:.:....x..:..x.......................... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 11343755 NA +3020 chr4 + 190214555 99631663 99631662 99631706 44 AAAAAAAGAAAAAAACAAAACAACAACAACAAAAAAAACAGACA chr4 - 94230402 65284690 65284689 65284733 28945670 28945669 28945713 44 AAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACA .......x...x....................x...x...x... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 34346973 NA +3208 chr4 + 190214555 99667950 99667949 99668008 59 ACATACACACACACACACATATATATATATATATATATATTTTTTTTTTTTTTTTGAGA chr4 - 94230402 33661791 33661790 33661849 60568554 60568553 60568612 59 ATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTTAGAAA .:.:...:...........x.x........:....xx:.:.x.....:......x..:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 66006159 NA +3075 chr4 + 190214555 99695343 99695342 99695398 56 TTTCATGTTCTTTGCCTACTTTTTAATGGTTTTTTTGTTGTTGTTTTTTACTTGTT chr4 - 94230402 72271203 72271202 72271258 21959145 21959144 21959200 56 TTACATATTTCTTGATTACTTTTTGCTGGTTTTTTTTTTGTTGTTGTTTGTGTGTT ..x...:..::...x:........:x..........x........x...::x.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 27424140 NA +3011 chr4 + 190214555 99752798 99752797 99752845 48 TATGAGTATTTTCTTCTTTTTTGTGAGTATTTTCTGTGGTTCTTTTTT chr4 - 94230402 37216473 37216472 37216520 57013883 57013882 57013930 48 TATAAGTATTTTTTTTTTGTTTGTGATTTATTTGTGTGGTTCTTTTTT ...:........:..:..x.......x.xx...x.............. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 62536325 NA +3912 chr4 + 190214555 99835561 99835560 99835750 190 CAGTGCAGGGGGAGT----CATGCCATGGTTTGGCCTGAGTGAAAGCGCTGTTCCCTCCTTTCTAGGTGGTATCACGGCAACCTCACACGCCATGCTGCTGAAGCTCTTCTCCTCTCAAATGGATGTGACGGCAGCTACCTTCTGAGGGACAGCAATGAGACCACCGGGCTGTACTCTCTCTCTGTGAGGTAAG chr4 - 94230402 78561496 78561495 78561662 15668741 15668740 15668907 167 CAGTGCAGGCAGAGCTGGCCCTGCCATGG--------------AAGCGCTGCCCATC-------------TACCACGGGGGCATCACTCGCGAGGCTGGGGAGAAGCTGCTGCTGGCGGCCGGTGCTGATGGCAGCTACCTGCTACGGGACAGCGAGAGCATCCCAGGGGTCTACTGCCTCTGTGTGCTGTGAG .........x:...:----.x........--------------........::.x::-------------..:.....x::.x....x...x.x....xx..::xx..x..x..xx.::x:..xxx...:...........x..:x........:.x::x.:.x.x...x.x....x:....x....xx..:.. 15M4I10M14D14M13D124M 109/163 66.9% 167/94230402 0.0% 31/163 19.0% 21274065 NA +3365 chr4 + 190214555 99839351 99839350 99839435 85 ATATATATATAGATATATATAGATATCTATAGATATATATAGATTAGATATCTATAGATATATATATAGATATATATATATTGTT chr4 - 94230402 61485373 61485372 61485457 32744946 32744945 32745030 85 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACATTGTT .....:...:.x.:.:.:..:x.:.:..:.:x:...:...:x...x:xxx...:.....:....x.......x:.:..:...... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 38353978 NA +3039 chr4 + 190214555 99857688 99857687 99857729 42 ATATGTATGTATATACACACACACACACACACACACACACAC chr4 - 94230402 14964843 14964842 14964884 79265519 79265518 79265560 42 ACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::..............xx........::............. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 84892845 NA +3040 chr4 + 190214555 99857688 99857687 99857741 54 ATATGTATGTATATACACACACACACACACACACACACACACACACACATAAAA chr4 - 94230402 8395820 8395819 8395873 85834530 85834529 85834583 54 ATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA .........:x..:.:xx.:.................x.....x.::x...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 91461868 NA +3003 chr4 + 190214555 99924268 99924267 99924326 59 CAAAGACTGACTCAAAGTTTTCAAAGAAAAGAGACAAGATTTTTTTTTTTTTTTTTTTA chr4 - 94230402 48520325 48520324 48520383 45710020 45710019 45710078 59 CAAGGACAAACTTAAGATTTCTAAAGACCTGAGAATAGATTTGCTTTTTTTTTTTTTTA ...:...x:...:..::...::.....xxx....xx......x:............... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 51403943 NA +3206 chr4 + 190214555 100006764 100006763 100006852 89 TTAATTCCCACAA---CTCTAGGAAGTAGGTA----CTAGTATGCCCATTTTAGAAATGAGAAAGCTGAGACATGAATAGATTAAGAAACTTACCC chr4 - 94230402 10729161 10729160 10729256 83501147 83501146 83501242 96 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCC ..x.x:.:.....---.:..:x..:.......----...x:.xx:........x.::..:....:.....:..::x.:..:.....x..:..:... 13M3I16M4I60M 62/89 69.7% 96/94230402 0.0% 7/89 7.9% 89277603 NA +3130 chr4 + 190214555 100009851 100009850 100009933 83 GCTCATAAAAACAACAACAATAAAAAGCCAGGGAATGTATAAATGTAGAACCTGAGTTTCTACTGAATATTCTTAAACAGAAA chr4 - 94230402 6212821 6212820 6212903 88017500 88017499 88017582 83 GCTCAGAAAAGCAACACGAACACAAATCTTGGGAGTATATAAAAGCAGAACCATGTTCTTTAGTGATTATTTTGACTCAGCAA .....x....:.....xx..:.x...x.:x....:.:......x.:......xx:x.:.:..x...x....:.x.xx...x.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 93797030 NA +3204 chr4 + 190214555 100021748 100021747 100021810 63 TCCCTCTTCCTTCTTTCTTTCCTCCTTTTTTTTCTTTTTTGTTTCCTCCATTTCTTCCTTTCT chr4 - 94230402 8141256 8141255 8141317 86089086 86089085 86089147 62 TCTCTCTTTCTT-GTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCT ..:.....:...-x...x....:...x.:....:......x..:...x..:..:....:.... 12M1D50M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 91880492 NA +3571 chr4 + 190214555 100065043 100065042 100065126 84 CTGCAGCCTAGACCTCCCGGGCCCAAGCAATCTTCCCATCTCAGCTTTCCAAGTAGCTGGGACTACAGGCATGCATCATCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:.....:.:.x..:.:...::....::x.::x.xx:x......:..:...........:......--.:....:..:::... 67M2D15M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 81867917 NA +3945 chr4 + 190214555 100067277 100067276 100067336 60 TTCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGCAC chr4 - 94230402 18197140 18197139 18197199 76033204 76033203 76033263 60 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...............x...x.xx.x........:............:.:....x.:.... 60M 50/60 83.3% 60/94230402 0.0% 0/60 0.0% 81870137 NA +3336 chr4 + 190214555 100079643 100079642 100079720 78 CCTGTTTTTTCTTTTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCATCTTTCTTTCTCTGTCT chr4 - 94230402 18988820 18988819 18988896 75241507 75241506 75241583 77 CTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTC-CTGTCT .:.:.x....x:...:.:.xx.::.x...:..........:............x...x.x..:::.x....-...... 71M1D6M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 81090823 NA +3127 chr4 + 190214555 100079644 100079643 100079700 57 CTGTTTTTTCTTTTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTT chr4 - 94230402 88442027 88442026 88442083 5788320 5788319 5788376 57 CTGCTTACTCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTT ...:..x:.......x.::...x...........x:......:x:::.......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 11637617 NA +3802 chr4 + 190214555 100079668 100079667 100079764 97 CTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCATCTTTCTTTCTCTG--TCTCCTTCTTTCCTTCTTTCCTTCTTCCCTGTCTTTCTTTCTCTCTT chr4 - 94230402 78374923 78374922 78375021 15855382 15855381 15855480 99 CCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTT .::.:....x.......:.x.:....:::......x...:...:......--...::::...xx...x.::xxx....:.:....:x::.:........ 50M2I47M 65/97 67.0% 99/94230402 0.0% 2/97 2.1% 21704745 NA +3001 chr4 + 190214555 100089309 100089308 100089363 55 TGCAAGTGTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGATACAGA chr4 - 94230402 19657047 19657046 19657101 74573302 74573301 74573356 55 TGTTAGGGATTTTTGTTTGTTTGTTTGTTTTCTTTTGTTTTGCATACGACAGGGA ..:x..x.x......................x..........:x.x:..:.x:.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 80432262 NA +3496 chr4 + 190214555 100121321 100121320 100121399 79 CTGTAACCCCAAACTCTTGGGCTCAAGTGATACTCCTGCCTCTGGCTTCCAAGTAGCTAGGACTACAGGTATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCAC ..::.:...x..:..::....:.......x.x.x.xx.x...x.x...:.........:.:......x.--........ 69M2D8M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 81924195 NA +3800 chr4 + 190214555 100128640 100128639 100128774 135 TCTCCATGGCTTTTGAT------CTTGCCCTTGAGCTCAAATTCCTTTCTTTCTTCCTTTCTTTCCTTTCTTTCTACCTCCCTCCCTCCCTCCC--TTCCTTCCTTCTTTCTTTTCTTTCTTTCTTCTTTCTTTATAAATTTT chr4 - 94230402 24861550 24861549 24861688 69368715 69368714 69368853 139 TCTCTTTTGCTTTCGTTATGCCACTGGCCCT--GGTACAAACCATTTTCTTTATCCCT--ATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTCATCCAGCTTTACAAGCCTT ....:x.x.....:.x.------..x.....--:.:x....::x:.......x.:...--x.x..x.........x..::..x..x.:.::...--.....::...:.:......::...x...x..:xx.....:..:::.. 17M6I8M2D25M2D34M2I47M 90/131 68.7% 139/94230402 0.0% 12/131 9.2% 75267090 NA +3001 chr4 + 190214555 100158459 100158458 100158503 45 TTTTTCTTTTTCTTTCTTTCCTTCCTTTCTTCCTTCCTCCCTCCC chr4 - 94230402 20596774 20596773 20596818 73633585 73633584 73633629 45 TTTTTTTTTTTTTTTTTTCCCTTCCTTTTCCCCCTCCCCCCCCCC .....:.....:...:..:.........:::..:...:...:... 45M 35/45 77.8% 45/94230402 0.0% 0/45 0.0% 79561685 NA +3236 chr4 + 190214555 100158459 100158458 100158519 61 TTTTTCTTTTTC---TTTCTTTCCTTCCTTTCTTCCTTCCTCCCTCCCTCCCTTCTTCTCTTCC chr4 - 94230402 92729638 92729637 92729701 1500702 1500701 1500765 64 TTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ...:..:.....---...:......:.:.::.:..x:.:..:..:...x..:............ 12M3I49M 46/61 75.4% 64/94230402 0.0% 3/61 4.9% 7428821 NA +3068 chr4 + 190214555 100178417 100178416 100178487 71 TGTGTGCACACATATATACACACATATATGTGTATATATGTGTGCACACATATATACACACATATATGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::.....::......:.......x....:::...x.x...:....::::.x.::.::::x....:..... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 28548282 NA +3924 chr4 + 190214555 100178470 100178469 100178612 143 ATACACACATATATGTGTGCACACATATATACACACATATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATG-------TGTGCACACATATATACACACA chr4 - 94230402 89016082 89016081 89016227 5214176 5214175 5214321 146 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATG----CAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCA ..:::....:..x..::........:.::.x::.:..:.:.::..----..x..::......::.x.......::..x.:.:x.:.:....:.:.x:...:::.x:..:x:.....x.:::-------.....x..:..x:.:..x.x.. 45M4D72M7I22M 84/139 60.4% 146/94230402 0.0% 11/139 7.9% 11162388 NA +4095 chr4 + 190214555 100178498 100178497 100178638 141 ATACACACATATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATG-----TGTGCACACATATATACACACA chr4 - 94230402 89016082 89016081 89016227 5214176 5214175 5214321 146 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACACCCCCA ..:::....:..x..::........:.::.x::.:..:.::::....x.:::...:..::.x..:........x...:x.:::......::x:..:.::.x...:x::....x:::.:x-----.....x..:..x:.:..x.x.. 119M5I22M 82/141 58.2% 146/94230402 0.0% 5/141 3.5% 11162416 NA +4280 chr4 + 190214555 100178524 100178523 100178635 112 ATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC ..:.:.......x..::........:.::.x::.:..:.::::....x.:::...:..::.x..:........x...:x.:::......::x:..:.::.x...:x::.... 112M 68/112 60.7% 112/94230402 0.0% 0/112 0.0% 11162442 NA +4490 chr4 + 190214555 100178550 100178549 100178683 134 ATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATGTATACACATATG-------TGTGCACACATGTATAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ..:.:.......x..::........:.::.x::.:..:.::::....x.:::...:..::.x..:........x...:x.:::......::x:..:.::.x....x::....x.:::-------.....x..:..x:.:.. 117M7I17M 82/134 61.2% 141/94230402 0.0% 7/134 5.2% 11162468 NA +4126 chr4 + 190214555 100178576 100178575 100178709 134 ATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATGTATACACATATGTGTGCACACATGTATACACATATGTG-------TGTATACATGTATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ..:.:.......x..::........:.::.x::.:..:.::::....x.:::...:..::.x..:........x...:x.:::....:.:.x:...:::.x::.:x:....:x..::-------...::x...:.x:.... 117M7I17M 79/134 59.0% 141/94230402 0.0% 7/134 5.2% 11162494 NA +3182 chr4 + 190214555 100178601 100178600 100178669 69 TATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATGTATACACATATGTGT chr4 - 94230402 13455964 13455963 13456028 80774375 80774374 80774439 65 TATGTCCAGACAGTTGCATGCATACACATATACATACATACGTGTG----CTTTTATGCACATACGTGT ...:.x..x...xx..::....:...:.......:.....:.....----.x.x...:......:.... 46M4D19M 50/65 76.9% 65/94230402 0.0% 4/65 6.2% 86722637 NA +3745 chr4 + 190214555 100178602 100178601 100178709 108 ATATACACACATATGTGTGCACACATATATACACACATATGTGTGCACACATGTATACACATATGTGTGC----ACACATGTATACACATATGTGTGTATACATGTATACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC ..:.:.......x..::........:.::.x::.:..:.::::....x.::::..:..::.x.......:----....x..:::.....::x:..:..::x....x::.... 70M4I38M 66/108 61.1% 112/94230402 0.0% 4/108 3.7% 11162520 NA +3526 chr4 + 190214555 100178628 100178627 100178746 119 ATATACACACATATGTGTGCACACATGTATACACATATGTGTGCACACATGTATACACATATGTGTGTATACATGTATACACATATGTGTGTATACATGTATACACATATATATACACA chr4 - 94230402 89016082 89016081 89016192 5214211 5214210 5214321 111 ATGTGCACACATCTGCATGCACAC------ACACGTTTGCGCACACACATGCAAATGCATA--CACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACA ..:.:.......x..::.......------....:.x..:.::........:.x.::....--:::...x.::...:.:..x.:.:x..:.:.:...:.x..:.::::x:..:x:.... 24M6D31M2D56M 70/111 63.1% 111/94230402 0.0% 8/111 7.2% 11162546 NA +3247 chr4 + 190214555 100178735 100178734 100178805 71 TATATATACACATATATGTGTATACATATATATACACATATATGTGTATACATATATATACAATGTGTATA chr4 - 94230402 37363042 37363041 37363112 56867291 56867290 56867361 71 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:..:....x::.....:::.::...x......xx:::...........::..x:.:.:.....:...... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 62815693 NA +3011 chr4 + 190214555 100178822 100178821 100178889 68 TATATGTATATACATATATATACATACATATATGTGTGTGTGTGTGTGTGTATGTGTATATATATATA chr4 - 94230402 4406404 4406403 4406471 89823932 89823931 89823999 68 TAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..x.x.:.....xx.xx:x....:..:.....xx.:.:x............:.......x:....... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 95772418 NA +3070 chr4 + 190214555 100178835 100178834 100178883 49 ATATATATACATACATATATGTGTGTGTGTGTGTGTGTATGTGTATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::....:...xx....x....................x::...... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 95772412 NA +3067 chr4 + 190214555 100221866 100221865 100221936 71 CTGGTTGCTTTTTTCTTTTCTGTTTTTTCTTGTTTGTTTTTTTTGTTTTTTTTGTTTTTTGCTGTTTTTAG chr4 - 94230402 43087537 43087536 43087607 51142796 51142795 51142866 71 CTGGCTACTTTTTTTGTTTGGTTTTTTTTTTGGGTCTTTTTTTAGATTTTTATACTTTTTTGTGTTTTAAG ....:.:.......:x...xxx......:...xx.x.......x.x.....x.::.....xx......x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 57134329 NA +3090 chr4 + 190214555 100226785 100226784 100226851 67 AAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGTTTTCC---TTTTTCAGAAAACTTGTCTTCA chr4 - 94230402 41527451 41527450 41527520 52702883 52702882 52702952 70 AAGCTCCTTTTTCTTTTTTTTTTTTCCTTTGGCATTTTATTTTCCCTGTTTTTAACTAAACAAATCATCA ...:.::.....:............::.....:x....:......---.....x.xx....xx:..x... 45M3I22M 51/67 76.1% 70/94230402 0.0% 3/67 4.5% 58699334 NA +3049 chr4 + 190214555 100269915 100269914 100269954 40 TGGTTTTCCCTCTATCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929908 18929907 18929947 75300456 75300455 75300495 40 TGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..:x....:....x.......................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 81340007 NA +3533 chr4 + 190214555 100272618 100272617 100272682 65 TCTCTCTATATATATACACACACACACACACACACGTATACGTATGTATGTATATGTGCATAGAT chr4 - 94230402 64433214 64433213 64433277 29797126 29797125 29797189 64 TTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC-CATGTGCAGAAAT .:.....:.:.:....:.:.:x:.....:.......:.............:-:.......x.:.. 51M1D13M 49/64 76.6% 64/94230402 0.0% 1/64 1.6% 35839404 NA +3465 chr4 + 190214555 100272625 100272624 100272757 133 ATATATATACACACACACACACACACACGTATACGTATGTATGTATATGTGCATAGATATATATATACACATATATATGCATATATGTACATATATATATCGATGCCATCTCAGGTGAAGTGAGAAATGCCTC chr4 - 94230402 4417349 4417348 4417470 89812933 89812932 89813054 122 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAA--------CATATAAACTGAGCAATGCTTC .:...................x:x...:::::.:.x:x..x..:.:....::xx..::..x..x...:...:....x.::x......:---:.:.x.:.:::.--------..x:.:..x....x.....:.. 88M3D12M8D22M 78/122 63.9% 122/94230402 0.0% 11/122 9.0% 95855276 NA +3842 chr4 + 190214555 100272625 100272624 100272724 100 ATATATATACACACACACACACACACACGTATACGTATGTATGTATATGTGCATAGATATATAT--ATACACATATATATGCATATATGTACATATATATAT chr4 - 94230402 73121107 73121106 73121208 21109195 21109194 21109296 102 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTAT ..::....x..:.....:.:.....x.x.:..:x...::..:.....x..:..::::.....:.--:....:...x...:..x:.:.x:x...:.:..:... 64M2I36M 66/100 66.0% 102/94230402 0.0% 2/100 2.0% 27151518 NA +3197 chr4 + 190214555 100272631 100272630 100272740 110 ATACACACACACACACACACACGTATACGTATGTATGTATATGTGCATAGATATATATATACACAT-ATATATGCATATATGTACATATATATATCGATGCCATCTCAGGT chr4 - 94230402 87372750 87372749 87372853 6857550 6857549 6857653 104 ACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAAT-TATGCCCAGAACAGATACTTATAC---CATAAATACTT---TGCCACCTGAAGT .:.........x.........:x............:......:.x:x.x..x:x..-...:.x..x-.:.x..:.x....:---....x...:x.---.....:..x.:.. 56M1D9M1I14M3D11M3D13M 76/103 73.8% 104/94230402 0.0% 8/103 7.8% 12899881 NA +3099 chr4 + 190214555 100291756 100291755 100291860 105 GGATTTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTTAAATTCACTCTACTTGTTAAAACTACA-TAAAATACC---AATGAGTCAAATACTAAGTATATCTAGTGG chr4 - 94230402 13501386 13501385 13501486 80728917 80728916 80729017 101 GGGTTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTAA--------TATATATTCAACCTTCATTAACATACTTAGAAACAGGCAGAAAAAAAGAGCATCTCATGG ..:....x...........xx....................--------..:x.:..x..x..x..-...x....:---..xx..x..:.x.xx...x::....x:... 41M8D17M1I9M3I30M 73/97 75.3% 101/94230402 0.0% 12/97 12.4% 86790370 NA +3108 chr4 + 190214555 100292643 100292642 100292700 58 CTTCAGTATCTTAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACATGTTAGACTCT chr4 - 94230402 2841188 2841187 2841245 91389158 91389157 91389215 58 CTTCAGCATTTAAAGGTTTTTGTTTTTTTTTTTTTTGTTCCTTTACAAGTTGAATACT ......:..:.x.:x......x..............x..::......x...::.:x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 97451455 92763100 +3108 chr4 + 190214555 100292643 100292642 100292700 58 CTTCAGTATCTTAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACATGTTAGACTCT chr4 - 94230402 2838200 2838199 2838257 91392146 91392145 91392203 58 CTTCAGCATTTAAAGGTTTTTGTTTTTTTTTTTTTTGTTCCTTTACAAGTTGAATACT ......:..:.x.:x......x..............x..::......x...::.:x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 97454443 92760112 +3210 chr4 + 190214555 100299141 100299140 100299188 48 GAAAAAAAAGAAAAAAAGGAAAAAAAAGGACAGAGAGAGATGGGAAAT chr4 - 94230402 40472545 40472544 40472592 53757811 53757810 53757858 48 GAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGAT ..............................x:.:.:.:.:x...::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 59826596 NA +3231 chr4 + 190214555 100314900 100314899 100314982 83 CTGCAACCTCTGCCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACGGGCATGCGCAACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx:x..:.::.:........x...x.xx.x........:............:.:...--:.:...:.x..:::. 66M2D15M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 82117774 NA +3246 chr4 + 190214555 100315156 100315155 100315197 42 TATTCCATTGCTTCTTGACCTTTTGGCTAAGATCAAATACAG chr4 - 94230402 56292875 56292874 56292916 37937487 37937486 37937528 42 TATTCCATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAG ...............:.x..................:.::.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 44022281 NA +3343 chr4 + 190214555 100325980 100325979 100326081 102 AAGTGAAAGGGAAGAGAGCAGATAAAGCAGAAAAATGATTAAAAGAAAGAAGAAACAAAGAGAAGAAAGTGAAATCA-GAAGCCTCATTCCTGAACACCATCT chr4 - 94230402 69746879 69746878 69746979 24483424 24483423 24483524 101 AAGTAAGAAGGAAGGTAACAGTAAAAATAAAAAATACATTAAAAGAAATCTGGAATAAATAGTAGAAAATGAAATGATGCAACTCCCTTTTT--ACACCATTT ....:.:.:.....:x.:...xx...::.:....xxx...........xxx.:..:...x..x.....:......x.-.x.:.::.x..::.--.......:. 77M1I14M2D9M 69/100 69.0% 101/94230402 0.0% 3/100 3.0% 30579101 NA +3041 chr4 + 190214555 100352910 100352909 100352959 50 AAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGGAAGGAGGAGGAGGAGGAA chr4 - 94230402 59863354 59863353 59863403 34367000 34366999 34367049 50 AAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAA .....:..:...::..:.....:..:............:.:..:x.::.. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 40489556 NA +3042 chr4 + 190214555 100352910 100352909 100352983 74 AAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAG chr4 - 94230402 59322148 59322147 59322221 34908182 34908181 34908255 74 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAG ....:.....x..x.:x.:.x:x.xx..x.:xx.:.....:....x................:x...xx..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 41030762 NA +3173 chr4 + 190214555 100361355 100361354 100361420 66 TCTCAAAAAAAAAAAAAAAAAATATATATATATATATATATATA-TATATATGTAGCTGTAATCATT chr4 - 94230402 69437735 69437734 69437801 24792602 24792601 24792668 67 TTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGTTCTTT .:.x.........x........:x...................x-..:...x...::.x.:x..x.. 44M1I22M 52/66 78.8% 67/94230402 0.0% 1/66 1.5% 30923620 NA +3617 chr4 + 190214555 100396618 100396617 100396696 79 CTGCAACCTCTGTCTTCTGGGTTCAAGCGATTCACGTTCCTCAGGCTCCAGAGTAGCTGGGACTACAGGCGTGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..............:.x.....:xxx.....x..::x:.........:......--.....:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 82199492 NA +3434 chr4 + 190214555 100416046 100416045 100416124 79 AAGATACATATGCATATATATATATAATGTGTGTGTATATATATACGTGTGTGTGTGTGTATACATACATATATATATA chr4 - 94230402 71194814 71194813 71194892 23035511 23035510 23035589 79 AACATGCATGCGCATATATATGTATAATGTACATCTTATAATACATCTGTGGGCATGTGAATACATTTATGTATATACA ..x..:...::..........:........:::.x.xxxx...:.:x....x.::....x......x:..:......:. 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 29221232 NA +3104 chr4 + 190214555 100416047 100416046 100416122 76 AGATACATATGCATATATATATATAATGTGTGTGTATATATATACGTGTGTGTGTGTGTATACATACATATATATA chr4 - 94230402 33398776 33398775 33398851 60831552 60831551 60831627 76 AGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACA ...x.:...::..:..::::.:.x.x::.:.:x:.:...x..x.x.....:.............:.:.....:.:. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 67017271 NA +3322 chr4 + 190214555 100481838 100481837 100481973 136 ATGTTTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCTTCCCTTCCTCCCTTCCTTCTTTCCTCCCTCTTTCCTTCTTTCTCTTCCTTCCTCCTTCCTTCTTTCCCTTCCTTTCCTTCTCTCGTTTTCTCCCT chr4 - 94230402 91731752 91731751 91731886 2498517 2498516 2498651 135 ATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTT-TATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCT ..x.:..:..x.:..x...:.:...::........:..:.:.::xxxxx..:.....x.:.:........:x.::.xx.x..-.x..x..:..:x::....x.x:.:x..x..x.:x.:x...:.xx..x:..... 82M1D53M 81/135 60.0% 135/94230402 0.0% 1/135 0.7% 8750086 NA +4056 chr4 + 190214555 100481841 100481840 100481946 106 TTTTCCTTCCTTCCTTCCTTTCTTCCT-TCCTTCCTTCTTCCCTTCCTCCCTTCCTTCTTTCCTCCCTCTTTCCTTCTTTCTCTTCCTTCCTCCTTCCTTCTTTCCC chr4 - 94230402 92729595 92729594 92729701 1500702 1500701 1500808 107 tttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ....:.:x::...........x....:-..x.x:.x:.::.:x..:....:..:.:.x...::.:....:....::::x::......::..x....:.....:.:.. 27M1I79M 68/106 64.2% 107/94230402 0.0% 1/106 0.9% 7752246 NA +3186 chr4 + 190214555 100490124 100490123 100490207 84 GCTAGGCTAATA--TGTGTTTTTGTG---TCTTAATTTTTTACAACTTGAAAAAGTAAAAAAAAAAAAAAAGATTAAAAACAGAAAAAA chr4 - 94230402 62885279 62885278 62885367 31345036 31345035 31345124 89 GCAAGAATAATAGCTATGCTCTTGAGAGATCTTAAGCTTCTATAGCACAGTAGATTAAAAAAAAAAAAAAAGGTTAAAAACATGAATAA ..x..:x.....--.:..:.:...x.---......x:..:..:.:.x:::x.:.x.................:.........x:..x.. 12M2I12M3I60M 61/84 72.6% 89/94230402 0.0% 5/84 6.0% 37604845 NA +3360 chr4 + 190214555 100519862 100519861 100519944 83 AAATATACACGCAGATATATTTAC-AGATATGTGTTTGCATATGCATGCTTGTGTGTATATGCATGTATATATAGAGAGAGAGA chr4 - 94230402 33398778 33398777 33398861 60831542 60831541 60831625 84 AAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGA ..........:..x::::.:xx..-.x...x:...x.x:.x.x.::...x..........::...:....:.:........... 24M1I59M 58/83 69.9% 84/94230402 0.0% 1/83 1.2% 67121084 NA +4145 chr4 + 190214555 100520853 100520852 100520962 110 TGTGAATGTACATGTATATATGTATATACATGTAAATGTGTATATATGTATA----TACATGTATATGTGTGTATATGTAAATACACATATACATACATACACATACAGAGCAA chr4 - 94230402 73121102 73121101 73121214 21109189 21109188 21109301 113 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA-AGCAA ....x...:.:..x:...:.::....:...x:x:x...x...:...:.....----:..:x.........x...:..:.......:.x:.:.x.x...:...::..:.-..... 52M4I52M1D5M 76/109 69.7% 113/94230402 0.0% 5/109 4.6% 27399751 NA +3000 chr4 + 190214555 100536362 100536361 100536430 69 CTGTAAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAAAGTCCTAAAATGTATGTGAAACCACA chr4 - 94230402 86679136 86679135 86679204 7551199 7551198 7551267 69 CTGAGGAAATATCACTGCCATTCTTCACAGATGGTGAAAAGAAGGCCTGGAGGTATATGTAAGGTCACA ...x::.....:..x..x.............x:xx.....:..:.:.:x:.::.:.....:.:::.... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 13857226 NA +4136 chr4 + 190214555 100582087 100582086 100582252 166 TTCACAGTGACACTCTATATCATC-TTGGGTGTAAACTTGCACCTGGTATGACTTGTTTCTTTCTTTCTTTCTGTCTCTCTCTTTGTTTCTCTTCCTCC--------------------------------CTTCCTCCCTTCCCTTCCCTTTTCTTTCTTTCTTTCTGTCTTTCTTCTTTCTTTCTTTCTCTCTCTCT chr4 - 94230402 9693642 9693641 9693834 84536569 84536568 84536761 193 TTAACAAAGAAACTAGATAGTATGGCTAGTTGTAAATTTTAATTTT---TGCCTTCTTAATCTCTTCCTCCCAGTCCCT---TCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..x...:x..x...xx...x:..x-:.:.x......:..xx.::.x---..x...x..xx.:....:..::.x...:..---.:.....x....:...:--------------------------------....:...::......:..:...:..::.:x...:..:.:...x..x...:........:..:..:.. 24M1I21M3D30M3D17M32I68M 109/160 68.1% 193/94230402 0.0% 39/160 24.4% 90888445 NA +3386 chr4 + 190214555 100582135 100582134 100582258 124 TGACTTGTTTCTTTCTTTCTTTCTGTCTCTCTCTTTGTTTCTCTTCCTCCCTTCCTCCCTTCCCTTCCCTTTTCTTTCTTTCTTTCTGTCTTTCTTCTTTCTTTCTTTCTCTCTCTCTCTCTCC chr4 - 94230402 28459078 28459077 28459201 65771202 65771201 65771325 124 TGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCC ......xx..x..x......x.x:x:..:x..:x..x.:..:........:xx.x..:x..::.x::.:xx.....::..:..:.xxx.:..x:x::.....:.....:x:.....:.:.:... 124M 74/124 59.7% 124/94230402 0.0% 0/124 0.0% 72123057 NA +3348 chr4 + 190214555 100606044 100606043 100606139 96 CTGATAAATTAAAATTTTCTTTATTTAAAATTTTGTAGTTGTAAAATACCTCTTTCAG-----------TGTAAGGCATATGTTTAAGAAGTATTCATTCATTCACT chr4 - 94230402 76654913 76654912 76655018 17575385 17575384 17575490 106 CTGATAAATAAACATTTTCTTTACTCAAAATTTTGCAGTTGT-AGATAGCACCTGAAGTCAAACAGCTCTGCAAAACAAAGAGTTAAAAAACATTCTCTCTCCCATT .........x..x..........:.:.........:......-.:...x.x.:.xx..-----------..:..::..x.x:x....:..::....x:..x::..:. 42M1D15M11I38M 68/95 71.6% 106/94230402 0.0% 12/95 12.6% 23951131 NA +3219 chr4 + 190214555 100712099 100712098 100712147 49 AGTTCTTTCCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTGAGACA chr4 - 94230402 24383520 24383519 24383568 69846835 69846834 69846883 49 AGTTCTCTCTTTTTTTCTTTTTCTTCCCCCTATTTCTTCTTTTGAAACA ......:..:...............:::.:.x...:..:......:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 76328579 NA +3147 chr4 + 190214555 100717213 100717212 100717284 72 CTGCAACCTCTACCTCCCAGTTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.::.x......:xx...x.xx.x........::::................x.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 82520087 NA +10406 chr4 + 190214555 100721147 100721146 100721702 556 TTTGTTCAGTCAAAAAGCTTGACAGCT-AGCTGTGGCAGGTTATTAATCTTTGTGTTGACTTCAAGTATAATATCAGAGTGGTGACTTGTCTGGGAGGTTTGTCAGAATGAATTGTTTTCTGAGATAGCAGATGGTTTGGAAATCATCTGCCATGACAGACTGAACAGACTAGAGTTTCAATTCTCTGTTC---------------------CTGGGGTGG-TGATGAGAAGGACACACACAGGAAATCAACTCTCCTGGTTTAACTGAAAACGGCTATGCACTGGACGGTCAGAGCACAAACTAGTAACAACTATGAAAGATAAATAAGAGGCAGGTGGGAAGTTCCTAATTAACTCCCATCTACTTC-AAGTTAATTTCCCTGAC-TCTACATTATTGCACATATGAGGAAACTCAATTTATG-CATATCAAGACTTGAT-TTTATAATTTTGCTTTTGAAAAATGAGATAATCAACAACAGAAGGAGTATATTAACTAGAGACCTGGATTACAGT-GATTCAGAGTGAGGTATCAGGTAATTGAATCTAGTCAGTTTATTCAGAGCAGGATGCAAATAAGT chr4 - 94230402 32295795 32295794 32296338 61934065 61934064 61934608 544 TTTTCCCAGGGAAGAGTCTTGACAGTTTAGCAATGGCAGGTTATTAATACTTCTGATGGCTTCAAATGCAATATCAGATTTGCTGCCTGGCTGGG-GGTTTGTCTAGACGGGCTGTTTTATTAGATAGCAGATGGCTGGGAAGTGGTGTGCTGTGACAGAGCTTACTGACTGGAATGTGAATTCTCTGCTCCTGGATCAGAGTGGGAAGGGGCTGGGGTGGAGGATGAGGAGAGCAC-------AACTCCCTCATCCCCATCCAGTGGAAAAAGCACGTGTATTTTATGGAGGGAAATGAGCTTAACTGCACTCGTCTCAGA----------------------TCCTAAAGCAACTCCAATCAATCACGGAATGAATTTCCCTAATATCTAC-TCCGTGCCAGTACTGGGAAAGTGAATTTATGATCTTTGACTGTTTAATATTTGTGATTTTGGTCTAGATAAATGAG-----CAGTGGCA----GAGCATATTGTCTGGACAAAAAAAAAAGTGTCGATCCAAATTCTGCTATCAGGTAATTGGATCTGTGCTGTTTATCCAGACCTGTGTGGGCAGAAGT ...x::...xx..:.:x........:.-...x:...............x:..x..x..:......:.::.........x.x.:x:.:..x.....-........x::.:.:::......x.x.............:.x....:.x:.x...::.......x:xx..x....:..:.x.x.........:..---------------------.........-x......:..::...-------..x..xx::x...:x:.::.::x.....x.xx::..:.:.xx.:..xx:..:xxx.:x:..::x:..x:::.xxx...----------------------.:.:x..x:......x...x.::x.-:.:.x.........:.:-.....-.:xx...xx:..:x:.....x.x........-:x.x.x.xx::..:..-...:.:......x.:.x..x.......-----..::::..----...:.....:x..:..x.xxx::.xx.xx..-...:..:.x.xx.x.............:....:xx.x......:....x.x.x:..x:x.x.... 27M1I67M1D95M21I9M1I15M7D78M22D25M1I17M1I5M1D31M1I16M1I27M5D8M4D31M1I65M 335/516 64.9% 544/94230402 0.0% 68/516 13.2% 68425352 NA +3802 chr4 + 190214555 100771070 100771069 100771236 167 GGAGAAAGGAAGGGAGGGAAGGTGGGAGGGAGGAAGGAAGGAGGGAAGAAAGGGAGGGAGG------GAGGGAGGATAGGGGAGGAGAGGGGAGGGAGGGAGGAAAGGAAGGAAAGAAGGAAGGAAGGAAGGAATGGGAAGGAGGGAGGAAGAAAAAAAGAGGGAAAGTAAGG chr4 - 94230402 8366325 8366324 8366496 85863907 85863906 85864078 172 GGGGTAGGGGGAAGAGGAGGCTCAGGGTGGAGAAATGACCAGGGGAAAAAGGACAGATGGGTGCTTTGGATGGTGACAAGTCAGTA-ATGGCAGAATGGGAGGAAAGGAGGAATAGAAGTATCCAGAGAAAGGATGGAAAAGAGTGAGACAGTGAGAAAGAAGCATAGTTGGG ..:.x.:..::::....:::xx::..:x....:..x..xx::.....:..:.:x..:x:..------.::x.:x..:.:.xx..x.-.x..x..::x............:.:.x.....x.xxx.::...:.:....:..:...x...:x..x:.:.....:.x.x...x:.. 61M6I19M1D86M 98/166 59.0% 172/94230402 0.0% 7/166 4.2% 92404745 NA +3108 chr4 + 190214555 100796887 100796886 100796931 45 CAGCTATATGTATGTATGTGTATATATATACACATACATATATAT chr4 - 94230402 56650839 56650838 56650883 37579520 37579519 37579564 45 CAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ..........::...:::.x......:.......:.......... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 44146048 NA +3519 chr4 + 190214555 100817683 100817682 100817765 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........:.x...x..x.x........::.:........::.:....--.:.:::....::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 82620557 NA +3192 chr4 + 190214555 100838089 100838088 100838175 87 AAACAAAAAAAAACAAAAATAAACAAAAAAAAACAAAGGTTCTTAATGAAATTTCTAGGTTTTTATAATGCAAATTTCTCTTGTGGT chr4 - 94230402 94096027 94096026 94096113 134290 134289 134376 87 AAACAAAAAAAAACAAAAAAACCAAAAAAAAAACAGTAGTTTTGAAAAAAGTATGTAATTTCATATTTTTCTGAGTTCTCTTAAAGT ...................x.xxx...........:x:...:.x..x:..:.x.x..:x..:x...xx.x.x:.x.......:x:.. 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 6742062 NA +3559 chr4 + 190214555 100853435 100853434 100853496 62 TGTGTGTGTGTGCACACATGTATGTACATGCA--CACACACATGTATTTACACACACACACTAT chr4 - 94230402 14964828 14964827 14964887 79265516 79265515 79265575 60 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATG----CACACACACACACTGT ...x..:..........:........:..:..--..........----:.............:. 32M2I10M4D16M 51/58 87.9% 60/94230402 0.0% 6/58 10.3% 85888607 NA +3096 chr4 + 190214555 100882623 100882622 100882699 77 ACAGGGAATTTAGAATCTGAGCAGATCTATGGACTATAATGAGTTCCATATTGTATATAATGAGTTTAAATACCTGG chr4 - 94230402 75938601 75938600 75938677 18291726 18291725 18291802 77 ACAGGAGCTTTAAAAATTGAACTGATTTATACCCTGTAATGTTTTCAATACTGTATAAATTAAGTTTGAGTTTCTAG .....::x....:..x:...:.x...:...:xx..:.....xx...x...:......x.x.:.....:.:.x:..:. 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 24944022 NA +3227 chr4 + 190214555 100887360 100887359 100887411 52 ATTTTGTTTTTTGTTTTCTGGTGGTTTTGAAGTCTTCTCTTCCTTCTTTCCT chr4 - 94230402 6701171 6701170 6701222 87529181 87529180 87529232 52 ATTTCCTCTTTTGCTCTCTCGTGATCTTGGATTCTTCTCTTCCTTCTTTTCT ....:x.:.....:.:...x...:.:...:.x.................:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 94186189 NA +3254 chr4 + 190214555 100915200 100915199 100915344 145 AGGGCCTTCACCAGACATTGAAACTTAACC------TTGGAATTCCCAGCCTCTGTATTTGTGAAGAATTAGATTCCTTTCTTTTTTTCTTCCTTCTTTTTTTTTTCTCTGTTTCATTTTTTTTTCTTTTGAGACAGGATCTTGTTTTGTT chr4 - 94230402 37505755 37505754 37505888 56724515 56724514 56724648 134 AGGTCTTTCACTAGTCACT---ATTTCACTCATTGTTTTCAATTCCCAAGC------------AAGTATTTTATTTTTTTCCCTCTTTCCTTCTTTTTCTGTTTTTGTCTGTTCCA-TTTCATTTCGTGTAAGA-AAGATCAAGTCCTGTT ...x.:.....:..x..:.---.:..x..:------..xx........:x.------------...x...xx...::....::.:....:.:...:..:.x.....x......:..-...:x....x.x.:...-.:....xx..::.... 19M3D8M6I15M12D53M1D17M1D16M 91/128 71.1% 134/94230402 0.0% 23/128 18.0% 63409445 NA +3142 chr4 + 190214555 100932034 100932033 100932181 148 ACTCTGTCTAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAGCAAGTATTATTCCTTA------CTTAAAAAAA-----AAATCAAGCTCAGGATAGGAA-CGGAAATGTTGCTGGTTAGCC----TAAATACAGTAATCATTACATAAATGTTAAAGAAA chr4 - 94230402 5590958 5590957 5591119 88639284 88639283 88639445 162 ACTTTGCCTAAGCAAAAGGGAAAAAAAAGAAAAAAAAGAAAAATGGAATCAGTGATCTTTATTGGGTTTTAAATATATTTGCTAAAGGAGCT--GCATAGGAATTAGCAATGTTATAGAAGAAAAAAGGTAAAAAAGGTAGCATTTACATAAATGCAAAGGAAA ...:..:....:x....::......:..:..:...........x.x..x:.x.:x..:...------:.....x.x.-----x..xx:....--.x.......-::.x......::x.:xx.:xx----....x.x:...::xx...........:x..:.... 61M6I10M5I10M2D9M1I21M4I35M 99/146 67.8% 162/94230402 0.0% 18/146 12.3% 95341076 NA +3139 chr4 + 190214555 100950615 100950614 100950654 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 81968300 NA +3102 chr4 + 190214555 100950617 100950616 100950652 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 19321553 NA +3353 chr4 + 190214555 100950617 100950616 100950656 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 81968302 NA +3538 chr4 + 190214555 100950619 100950618 100950705 87 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG--------------AGCACAA------CAGAGACAGAAACAGAAAGGGAAAGTTCTGGGAAATACTTGG chr4 - 94230402 81629064 81629063 81629170 12601233 12601232 12601339 107 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAGAGTGGTGGG ..........:.........................x.--------------.::.:..------..x.:.x......xx.:.....x.:.x....::.:.:x.x.. 38M14I7M6I42M 67/87 77.0% 107/94230402 0.0% 20/87 23.0% 19321555 NA +3567 chr4 + 190214555 100950619 100950618 100950658 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 81968304 NA +3224 chr4 + 190214555 100950621 100950620 100950656 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ................x................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 81968306 NA +3213 chr4 + 190214555 100950621 100950620 100950687 67 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGCACAACAG-----AGACAGAAA-----CAGAAAGGGAAA chr4 - 94230402 81629064 81629063 81629140 12601263 12601262 12601339 77 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAA ..........:.....x...................x.:x:x....-----.:.:.x...-----..x....:.... 46M5I9M5I12M 55/67 82.1% 77/94230402 0.0% 10/67 14.9% 19321557 NA +3229 chr4 + 190214555 100966543 100966542 100966610 68 ATTGTTAAAATGTGGCTTTCATCTCTGTGATTTTTTTGTTTTGTTTTTTGTTTTTGTTTTTGTTTTTT chr4 - 94230402 20565617 20565616 20565681 73664722 73664721 73664786 65 ATTGTTTAAATT---CATTTATCTTTGTGGGTTTTTTTTTTTTTTTTTTGTTGTTGTCGTTGTTTCTT ......x....x---.x..:....:....:x......x....x.........x....:x......:.. 12M3D53M 52/65 80.0% 65/94230402 0.0% 3/65 4.6% 80400926 NA +4688 chr4 + 190214555 100998149 100998148 100998333 185 AAATAATATATTTTATTTATATTATAGATA----ATATATGAATACATTGT----TTATGTATTATATAA-AATATGTTATATAAAACA--TGTTTTATATAAAATATATAATATATAATATATAATATATATTTGTAATATAAAATATATTATTTGTATAAATAATATATGATA-TATTTTATTTGTATAAAATAT chr4 - 94230402 20596440 20596439 20596634 73633769 73633768 73633963 195 AAAAAATATTTCTAAGTCAAATGTTAATTACCATGTATATCATAACATTATAACGTGaaataatatttaataatttgtattataaaaCAGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACA--ATTTAAAAGTTTAATATTTGATGTTGTCTTATATCTCTACAATGT ...x.....x.:.x.x.:.x..xx..:x..----:.....x.xx.....:.----.x.x:..x...x...-...x...xx.........--.::......x..x..............x.:........:..xx...x.......:..:.--....:x.x:xx......x....:-.:.:....x.x.x..x...:. 30M4I17M4I15M1I18M2I59M2D23M1I21M 132/183 72.1% 195/94230402 0.0% 14/183 7.7% 80401709 NA +3005 chr4 + 190214555 101025801 101025800 101025859 59 CCCATCATGCCCCGCAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAACAGGA chr4 - 94230402 91846544 91846543 91846602 2383801 2383800 2383859 59 CTCAGCGTGCCCCACAAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGA .:..x.:......:..:xxx...::..............x....:..:.:x.....:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 9179257 NA +3777 chr4 + 190214555 101033200 101033199 101033303 104 CTTTAAAATACAAATTGTATATATACACATATAC-ACAAACATACATATATTTGCGTGTATATATACATACATAGAGACACACACACACACACAAACACACACAC chr4 - 94230402 14964780 14964779 14964884 79265519 79265518 79265623 105 CTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:x....x:....x..:..x....:.x.x:.::-::::...:.x....:.........::.:.::::..::..x.x...xx........::..x.......... 34M1I70M 68/104 65.4% 105/94230402 0.0% 1/104 1.0% 86068420 NA +3008 chr4 + 190214555 101033215 101033214 101033324 110 TGTATATATACACATATACACAAACATACATATATTTGCGTGTATATATACATACATAGAGACACACACACACACACAAACACACACACACACACACACACACACACACA chr4 - 94230402 73121104 73121103 73121213 21109190 21109189 21109299 110 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:..::...:x....:...:.x...:.x.x::..xx.::::..::....x:....::::x.:.::::x::...:.:...:..:.x....x.x.......:::.:.x:.. 110M 61/110 55.5% 110/94230402 0.0% 0/110 0.0% 27912111 NA +3459 chr4 + 190214555 101033218 101033217 101033298 81 ATATATACACATATACACAAACATACATATATTTGCGTGTATATATACATACATAGAGACACACACACACACACAAACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTAC------ATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::.::.:.:..:......::..x..:------:...:...:.x.....x:.x.................:..... 32M6D43M 54/75 72.0% 75/94230402 0.0% 6/75 8.0% 92637430 NA +3700 chr4 + 190214555 101057130 101057129 101057212 83 CTGCAACCTCTGTCTCCCGGGTTCAAGCGATTCTTGTGCCTCAGCCTTCCAAGTAGCTAGGAATACGGATGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx:x..:.:.........:.x...x::x.x.........:.........:.:.x...--.:.........::.. 66M2D15M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 82860004 NA +3467 chr4 + 190214555 101102231 101102230 101102297 67 GGAGGGAGGGAGGCAGAGAAAGGAAGGAAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGAGAGGGAGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAA--AAGGGAGCGGGGGTGGGGGG ..:.:......:.x.......:...:......x...x....:.:.--.......x.:.:.x...:.. 45M2D20M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 32035546 NA +3216 chr4 + 190214555 101106314 101106313 101106481 168 TGTGCTACTGCAT-------TGTAGCCTGGGTGACAGAGGGAGACCCTGTCTCATTTAAAAGAGAGAAAAGAAAGAAAGAA---------AGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 56098372 56098371 56098548 38131855 38131854 38132031 177 TGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTG--------AGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA ....:x.......-------x..::xx....::.x::..::..:.:...--------.:.:xx.:.....::xx.:....:---------.:.x....:...-...:..xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx..:....xxx.....:...xx..x.. 13M7I29M8D24M9I12M1I82M 100/160 62.5% 177/94230402 0.0% 25/160 15.6% 45007942 NA +3281 chr4 + 190214555 101106336 101106335 101106498 163 GGTGACAGAGGGAGACCCTGTCTCATTTAAAAGAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 90814944 90814943 90815110 3415293 3415292 3415459 167 GGGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAATAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGACAGCTCCAGAAAGAAGTAGTAA ..x..x....:....xx:x.xx:x:x...x::......:.x:.....:...x.:.:.:.:..:..----xx.....:...x:::.:xx::.x..:..x:x::..:...x:::.xx.:...x..:.......x..:....:.....x.:xxxx.....::.:x..x.. 65M4I98M 94/163 57.7% 167/94230402 0.0% 4/163 2.5% 10291392 NA +3401 chr4 + 190214555 101106363 101106362 101106505 143 TAAAAGAGAGAAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA---AGAAAGAAAG---------AAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGA chr4 - 94230402 18962239 18962238 18962395 75268008 75268007 75268164 157 TAAAAAAGGGATGCGATATTGAGAAGGGATGTTGAAGAATTAAATGAATAACTAAAAAGAGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGA .....:..:..x:x..x.xx:....:.:.x.--:.....xx...x:..x..xx...:.:..:.x...:x:..x:..x..---:....:..:.---------........x.::...x...:....x:.xx::x..x....:.....x....x..... 31M2I46M3I10M9I56M 94/143 65.7% 157/94230402 0.0% 14/143 9.8% 82144124 NA +3057 chr4 + 190214555 101106376 101106375 101106458 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.....:... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 64248082 NA +3011 chr4 + 190214555 101106381 101106380 101106481 101 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x.::.:....x.::.::.....::... 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% 39771680 NA +3483 chr4 + 190214555 101106388 101106387 101106469 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x............ 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 64248094 NA +3028 chr4 + 190214555 101106389 101106388 101106493 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x...:..x:.x..:...:..x..:..::..:..:.:.x.:. 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 39771688 NA +3048 chr4 + 190214555 101106401 101106400 101106505 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x.:.:..x.x.:.::.x:.x.::.:....x.::.::.....::...x... 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 39771700 NA +3352 chr4 + 190214555 101106408 101106407 101106489 82 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 36858294 36858293 36858375 57372028 57372027 57372109 82 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx:..::..:...:.:::x.::..x............ 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 64248114 NA +3161 chr4 + 190214555 101106428 101106427 101106530 103 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAACATT chr4 - 94230402 32025522 32025521 32025624 62204779 62204778 62204881 103 AGATAGGGTGAGGGGATGATTAAAAAGACCCACAAAACACATACACACAAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTT ...x..::x..::.:.x..xx:...:::xxx.x....x.x.x:x.x.x....x.:..x.....:.:......::.......:....x....:.....:.:x.. 103M 65/103 63.1% 103/94230402 0.0% 0/103 0.0% 69080906 NA +3284 chr4 + 190214555 101106437 101106436 101106526 90 GAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAA chr4 - 94230402 79562498 79562497 79562587 14667816 14667815 14667905 90 GAGAGAAATGATTACAGAGGGTATTACAGAACAACATATACAGGAAAAGAAAACAAAAAAAATGAAAGAAAGAAAGGTGAAGAGGTAGAA ..:.....x:.xx.x....::x.xx.x....x.:x.x.x.x.:..........x....:...x.............:x:....::x.:.. 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% 21543939 NA +3814 chr4 + 190214555 101124593 101124592 101124706 114 AGCAAGACTCTGTCTCAAAAAAAGAAAAAAGAGAAAGAAAGAAAAAGAA--------AGAAAGAGAGGGAGAGAGAGACAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAA---GAAAGAAAGA chr4 - 94230402 62511290 62511289 62511414 31718989 31718988 31719113 125 AGAAGGACTCT-TCTCTAAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGA ..x.:......-....x....:.x...:..:.:....:....x.:..::--------..x..:.:.x.:....::..:.....:......x....:.:-...:xx..x..x..---......:... 11M1D37M8I41M1I14M3I10M 82/113 72.6% 125/94230402 0.0% 13/113 11.5% 38613303 NA +3215 chr4 + 190214555 101124616 101124615 101124688 73 GAAAAAAGAGAAAGAAAGAAAAAGAAAGAAAGAGAGGGAGAGAGAGA--CAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 40472545 40472544 40472619 53757784 53757783 53757858 75 GAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .......:.....:....:....:....:.:.:.:...:.:.:.:..--:.::.:.x:.:.....x:...:::.. 47M2I26M 49/73 67.1% 75/94230402 0.0% 2/73 2.7% 60652071 NA +4037 chr4 + 190214555 101124630 101124629 101124751 122 AAAGAAAAAGAAAGAAAGAGAGGGAGAGAGAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA---AGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGAC--AAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:........:.:.::.:......x...xx.x:.:....x..:::xxx....x--.....xx....x.:.::..x:.:....:.........:x.---::..:..:..:..x.... 62M2D40M3I18M 81/120 67.5% 123/94230402 0.0% 5/120 4.2% 70591466 NA +3064 chr4 + 190214555 101124673 101124672 101124768 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x.::...x.x...:.:x:.x.:::...:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 39789972 NA +3139 chr4 + 190214555 101124674 101124673 101124784 111 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 28816810 28816809 28816920 65413483 65413482 65413593 111 AAGGCTAGATAAATGGTAGGAAAAAAAGAATGAAAAGCTGACAGAGATAAAAAGAAAGAAAAGAACACATGGAGCTGTTATGAAGCCATGAAAGAAAGAAATCAAAGCAGA ..:.xx...x.:.x:.x.:....:......x....::xx..x...:.x...:.........::..x.x.x::..xx:xx.x...:xx.x............xx..::x... 111M 70/111 63.1% 111/94230402 0.0% 0/111 0.0% 72307864 NA +3180 chr4 + 190214555 101124701 101124700 101124816 116 GAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAACTGTATTGGTG chr4 - 94230402 61334701 61334700 61334816 32895587 32895586 32895702 116 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGATTGGATTTATG ......:.....x......x.:x........:x::::...x:xx:.x.:.:xx..x.::...x.x...:.:x:.x.:::...:.x..:........:::::x.:.:..x...x:.. 116M 68/116 58.6% 116/94230402 0.0% 0/116 0.0% 39790000 NA +3151 chr4 + 190214555 101124705 101124704 101124814 110 GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAACTGTATTGG chr4 - 94230402 61334701 61334700 61334809 32895594 32895593 32895702 109 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAG-ATTGG ......:.....x......x.:x.:......:x::::...x:xx:.x.:.:xx..x.::...x.x...:.:x:.x.:::...:.x..:.........:.:..x.-..... 104M1D5M 68/109 62.4% 109/94230402 0.0% 1/109 0.9% 39790004 NA +3146 chr4 + 190214555 101124717 101124716 101124801 85 GAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:.:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 64266424 NA +3281 chr4 + 190214555 101139703 101139702 101139761 59 TTTTTTTTTTTTTTTGTCGTTGTTGCTGTTTGTTGGGTTTGCTTGTGT-GCTTTTGTCCT chr4 - 94230402 50739024 50739023 50739083 43491320 43491319 43491379 60 TTTTTCTATTTGTTTGTTGTTGTTGTTGTTTGTTGGTTTTGTTTGTTTAAATTTTGTTCT .....:.x...x.....:.......:..........x....:....x.-:x......:.. 48M1I11M 48/59 81.4% 60/94230402 0.0% 1/59 1.7% 50400679 NA +3033 chr4 + 190214555 101216613 101216612 101216686 74 CTGCAGCCTTGACCTCCCCAGTGCAGGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTATAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.:x:..x..:...x.:.x.xx:x........::::.........:....:.x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 83019487 NA +3362 chr4 + 190214555 101264424 101264423 101264502 79 AAAATCAGCACCTTAAGACAGGGCAAGAAAAAGAAAGTTAACAAAAAGAAAAAATTAAAATAAAAGAAGGAAGGAAAAA chr4 - 94230402 7711336 7711335 7711405 86518998 86518997 86519067 70 AAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAA---------AAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA .....:..x:x..x..::...::x........:...---------.........:.:......:...:...:....:.. 36M9D34M 53/70 75.7% 70/94230402 0.0% 9/70 12.9% 93553088 NA +3203 chr4 + 190214555 101269581 101269580 101269644 64 TGTGTGTGTGTGTGTGTGTGTTTTAACTGCTATGTATCCCCAGAACCTGGAAAACATCTTGGTA chr4 - 94230402 57751868 57751867 57751931 36478472 36478471 36478535 64 TGTGTGTGTGTGTGTGTGTATTTAAACTGCTCTGTGATTTCAGAGCAAAAAAATCATTAAGGTA ...................:...x.......x...:x:::....:.xx::...x...:xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 43517713 NA +3170 chr4 + 190214555 101275818 101275817 101275890 73 TGGTGTGGTTTTTTTCGCTTTTTGTTTTCTGTGTGTATGTGTGGTTTTTTTTTTGTTTTTTGTTTGTTTGTTT chr4 - 94230402 39399605 39399604 39399677 54830726 54830725 54830798 73 TGAGGTGGGTTTTAGAGTTTCTTTCTTTCTTTTTTTAAGTGTGTGGGTTTTTTTTTTTTTTGTTTGTTTGTTT ..:x....x....xxx.:..:..x:.....x.x.x..x.....xxxx.......x.................. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 61876213 NA +3259 chr4 + 190214555 101275838 101275837 101275927 90 TTTGTTTTC------TGTGTGTATGTGTGGTTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTTTTTTGAGACAGGGTCCA chr4 - 94230402 56879504 56879503 56879599 37350804 37350803 37350899 96 TTTGTTTCCAAAGGCTGTGTTGTTGTTTGGTGGGTTTTTTTTTTGTTGTTTGTTTTTTTTTGGTTCGTTGGTGGTTTTTTTTTCAGTCAGTGCACA .......:.------.....xxx...x....xxx......x...x..........x...x.xx..:...xx.x..........x..x...x.:x.. 9M6I81M 67/90 74.4% 96/94230402 0.0% 6/90 6.7% 44396334 NA +3110 chr4 + 190214555 101275839 101275838 101275909 71 TTGTTTTCTGTGTGTATGTGTGGTTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTTT chr4 - 94230402 61873910 61873909 61873980 32356423 32356422 32356493 71 TTGTTTTTGGGGGGTTTGTTTTGTTTTGGGTGGGTTTTTTTTTTGTTTGTTTGTTTTGGGTTTTTTTCCTT .......:x.x.x..x...x.x.....xxx.xx.......x................xx.......x::.. 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 39401929 NA +3144 chr4 + 190214555 101275851 101275850 101275919 69 TGTATGTGTGGTTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTGTTTTTTTTTGAGAC chr4 - 94230402 81343628 81343627 81343696 12886707 12886706 12886775 69 TGTGTGTGTGTTTTTTTTTTTTCTTCTTCTCGATCCATTTGTGGTTGGCTTTTTTTTTTTTTTTTAAGC ...:......x..........x:..:..x.:x:.:::.....xx..x.:.....x.........x.::. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 19932223 NA +3020 chr4 + 190214555 101275863 101275862 101275902 40 TTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTT chr4 - 94230402 71609805 71609804 71609844 22620559 22620558 22620598 40 TTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTT ......x......:.....................x:... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 29666058 NA +3658 chr4 + 190214555 101320416 101320415 101320522 107 AGCTTGAATGGTACACACACATACACAAAACCACTCAT------ATGTATGTATGTATGTATGTATGTGTGTGTGTGTGTGTATACACACAC----ACACACACACATACACAGACA chr4 - 94230402 8395744 8395743 8395860 85834543 85834542 85834659 117 AATTCAAGTGGAATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .::.::.:...x.:x:::.......x..:.xx.:..x:------....:.......:..:..:x.::...:.x.:::.:.....:.x:...:----...........:......... 38M6I48M4I21M 71/107 66.4% 117/94230402 0.0% 10/107 9.3% 92924672 NA +3582 chr4 + 190214555 101320420 101320419 101320522 103 TGAATGGTACACACACATACACA-AAACCACTCATATGTATGTATGTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACATACACAGACA chr4 - 94230402 33398774 33398773 33398865 60831538 60831537 60831629 92 TGAGAAATATACACACATGCGCACAGACCA------------TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACA ...:x::..:........:.:..-.:....------------...:x......x..x:x.....:...............:.:.:.....x.x.x.x.x..... 23M1I6M12D62M 68/91 74.7% 92/94230402 0.0% 13/91 14.3% 67921646 NA +3361 chr4 + 190214555 101320426 101320425 101320526 101 GTACACACACATACACAAAAC-CACTCATATGTATGTAT-----------GTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACATACACAGACAATAT chr4 - 94230402 14964775 14964774 14964887 79265516 79265515 79265628 113 GTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT ......x..x.x.x:....::-..:.:....:x.x..:.-----------:.....x..::....:::::....:......:...xx........::..:.....x...x.:. 21M1I17M11I63M 69/101 68.3% 113/94230402 0.0% 12/101 11.9% 86355651 NA +3614 chr4 + 190214555 101320428 101320427 101320523 96 ACACACACATACACAAAACCACTCATATGTATGTAT--GTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACATACACAGACAA chr4 - 94230402 73121117 73121116 73121214 21109189 21109188 21109286 98 ATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAA .:.....:.......:..x..:xx:..::..:....--...::::x....:....x..:::.:.:x....:.x....x.x........::.:.::... 36M2I60M 63/96 65.6% 98/94230402 0.0% 2/96 2.1% 28199311 NA +3368 chr4 + 190214555 101320449 101320448 101320509 61 CTCATATGTATGTATGTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACAC chr4 - 94230402 25393250 25393249 25393308 68837095 68837094 68837153 59 CTGATAAAAATGTGTGCATGT--GTATGTATGTATTTGTGTGTACACACACACACGCACAC ..x...x:x....:..:....--......:...:.x........:..........:..... 21M2D38M 48/59 81.4% 59/94230402 0.0% 2/59 3.4% 75927199 NA +3214 chr4 + 190214555 101320452 101320451 101320523 72 ATATGTATGTATGTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACATACACAGACAA chr4 - 94230402 8395796 8395795 8395867 85834536 85834535 85834607 72 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA ..:...:::..x::......x..::.:...:..:x.:::.xx.:.................x.....:.::. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 92924656 NA +3573 chr4 + 190214555 101320462 101320461 101320513 52 ATGTATGTATGTATGTGTGTGTGTGTGTGTATACACACACACACACACACAT chr4 - 94230402 25393259 25393258 25393310 68837093 68837092 68837144 52 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGT ....:..:....:.:...:...:.x.....:.............:.....:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 75927203 NA +5344 chr4 + 190214555 101347233 101347232 101347553 321 GGCCGGGGGCGAGGGAGGAGAGGCAGGGCCGCCGATGTC--------------AGTGCCACCAGCCGCACCTTGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGTGCCGCGGCCGCCGGAGACGTCCCGCCGCCGCGATCGCCCGCGCTCGCCTCTGCCTCCCCGCGCCGCTCCTCCACTCACCAAGGC--ACAGCCGCC----GAGCT-CGGCAGACACAGTCCCGGGCACAACCTACCC-----CCCTCCGCCGCCGCCGCCGCCGC chr4 - 94230402 6788841 6788840 6789164 87441239 87441238 87441562 324 gggcggcggcggcgggggcggcggAGGGCCGACGGCCGCCTCGGGAGCCTCGGAGTGCTGCGGGCC-CGCCTCGGCCTCGCCGGGAGCCGCCGAGCCGCTGCCGGTGCTGCCGCTGCTGCTGCTCTCCTCGCTG----------CACAGCTCCT-CGTCGTCCTGCAGCTCGCTGTC---GGGGCTGCGGCT--------CGGCCGGCTGCTGTAGTCCAGGTCGCACTCCTCGGCCTTGTAGAGCTCGCCGTCCTCTGCGCAAAACAGACAGCCGCCGTTAGAGCTCCGCCAGCCCCAGCCCCGACCGCGCGCGGCCCCGACGCCCTTCGGCCTCCCCGCTGCTGC ..x...x....:x..:..x.:x.x.......x..::xx.--------------.....::.x:...-.:...:...x..x....x:..x.xx::..x..:....x..................:x::x:.....----------.:.x..:...-.x..x:.x::...xx...:.:.---..x..:.....:--------..x..x..:..:.:::..xxxxx...x.x....x....:x:x.x..:xx:.x...x..xxx...::.--.........----.....-..x...x.x...:....:x.:.:xx.x:...-----....:..x.x:.x....:..:.. 39M14I13M1D67M10D10M1D22M3D12M8D67M2I9M4I5M1I31M5I23M 194/298 65.1% 324/94230402 0.0% 49/298 16.4% 94558392 NA +3530 chr4 + 190214555 101361490 101361489 101361553 64 AACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAGAAAAAGAAGAAA chr4 - 94230402 13722705 13722704 13722768 80507635 80507634 80507698 64 AATTCAGTTTGGGGGAAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAA ..:..x..:.x::::........:.x..................x..x.....::...x..... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 87638785 NA +3146 chr4 + 190214555 101368343 101368342 101368398 56 TATCCCCCACCAAAAAAAAAAAAAAAGTAAAAGAAAAAGAAAAAAGAGAGGAAGAA chr4 - 94230402 34672386 34672385 34672441 59557962 59557961 59558017 56 TATCTCCTGTAACAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAA ....:..:::x.x.....:......x.x..........:....::...:...:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 66695957 NA +3461 chr4 + 190214555 101368361 101368360 101368481 121 AAAAAAAAGTAAAAGAAAAAGAAAAAAGAGAGGAAGAAGAAAAAGTAAAAGAAAAAGAAAGAAGAGAGGAAGAAAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAACCAAAAAAAAT chr4 - 94230402 51550758 51550757 51550878 42679525 42679524 42679645 121 AGAAACATCCAAAAGACAATGATAAATGCCAGAAAATAAATAATATCAACAGCCCAAAAAGAAGAATGGAGGAAAAAGAGGGGGAAAAAAAAAAAAACAAGCAGGAAAACCCACAAAAAGT .:...x.xx:......x..x..x...x.xx..:..:x.:.x..x:.x..x::xxx.:........:x...:........::..:.::..::..::..x..:x.:::...x...x.....:. 121M 74/121 61.2% 121/94230402 0.0% 0/121 0.0% 49817603 NA +4207 chr4 + 190214555 101368361 101368360 101368482 122 AAAAAAAAGTAAAAGAAAAAGAAAAAAGAGAGGAAGAAGAAAAAGTAAAAGAAAAAGAAAGAAGAGAGGAAGAAAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAACCAAAAAAAATC chr4 - 94230402 62705439 62705438 62705560 31524843 31524842 31524964 122 AGAACAAAATCACAGATAGGGATGAAAGAGAGACTGCAGTAAAAGTAAAAAAGAAATGATTAGGAGAAGAAAAGAAAGAAAACCCCAAACAACAACAGCAACAAAGAAAAACAGAGAAAATC .:..x...:.x.x...x.::..x:........:xx.x..x..........:.:...x:.xx.:....:...:.:.......:xxxx:..x:.x::x..x..x........x..:.:...... 122M 80/122 65.6% 122/94230402 0.0% 0/122 0.0% 38662922 NA +3336 chr4 + 190214555 101368390 101368389 101368547 158 GAGGAAGAAGAAAAAGTAAAAGAAAAAGAAAGAAGAGAGGAAGAAAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAACCAAAAAA-AATCCGAGATTGTGGGACAACTACAAAAGGTTTAACATACATGTAATGGAAATACCAGAAAGAGAAAGA chr4 - 94230402 59152548 59152547 59152685 35077718 35077717 35077855 138 GAAGCAGATAATAAACTCACAAAAAAAGAAGGAAGCATGCCAGAAGAACAATGAAAATAAATTTAGAAGGAAAAAAAAAAACCAAAAAACAACACGAAA-----GACAAACAACCAAAGCTCTAAGGCACCT----------------AAAGAGAAGGA ..:.x...x:.x...x.x.x.:........:....x:x.xx....:..x..x.:..:x..:xxx:....:..:...:............-..:x...:.-----.:xx...x..x....x.:...x::..x.----------------........:.. 89M1I9M5D28M16D11M 93/137 67.9% 138/94230402 0.0% 22/137 16.1% 42215842 NA +3019 chr4 + 190214555 101368405 101368404 101368486 82 GTAAAAGAAAAAGAAAGAAGAGAGGAAGAAAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAACCAAAAAAAATCCGAG chr4 - 94230402 76700546 76700545 76700627 17529776 17529775 17529857 82 GTAAATAGTAAATTAATAGAAGAAGGAAAAAAAGATGAAATTGAGTGAAAGCAGTAGAAAAGAAAACCAAGAAAAATAGGAG .....x::x...xx..x.::...:.:.:.......x:::.xx..:x...:.x..x.::............:......xx... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 24667859 NA +3004 chr4 + 190214555 101404319 101404318 101404369 51 TCATGACTATACACACACACACACACACACACACACATATATATATATACA chr4 - 94230402 71167180 71167179 71167230 23063173 23063172 23063223 51 TCATGGCTGTAAAAAAAAAAAAATACACACACACACATATATATATATATA .....:..:..x.x.x.x.x.x.:.........................:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 30237139 NA +3180 chr4 + 190214555 101425343 101425342 101425414 72 TCCTGCTCCTCCTCCTCCTCCTCC---------TTCTCTCCTCCTTCTCCTTCTCCTTTTCCTTCTTCTTCATTTTTTTTT chr4 - 94230402 35294579 35294578 35294659 58935744 58935743 58935824 81 TCCTGCACAATTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTT ......x.xx::.....:.::...---------..:::..:.....:x.:....:x.........:...........::.. 24M9I48M 52/72 72.2% 81/94230402 0.0% 9/72 12.5% 66130764 NA +3066 chr4 + 190214555 101443168 101443167 101443208 41 TTTTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTGAGACGG chr4 - 94230402 66904543 66904542 66904583 27325820 27325819 27325860 41 TTTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTTGAGGAGG ...................x.......x.........:x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 34538625 NA +3100 chr4 + 190214555 101443168 101443167 101443209 42 TTTTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 51354301 51354300 51354342 42876061 42876060 42876102 42 TTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGAAGAA ..................:......:........x...x.:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 50088867 NA +3180 chr4 + 190214555 101453417 101453416 101453475 59 CTCCTGGGTTCATGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx...x.xx.x........:..:.........:......x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 83256278 NA +3288 chr4 + 190214555 101470299 101470298 101470404 106 TGTGTGTATATACACACAGACACACACATATGTGTATATATAGACACATATATATACACATATATACATATGTGTATATATAGACACATATATACACATATATACA chr4 - 94230402 73121104 73121103 73121209 21109194 21109193 21109299 106 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ..::..:....x..:...x.:.:.....x.x.::.:x:..:.x..::...x:..:..:x:.....:::x:.:::....x...x:.x..:.x.x.....:..:..:. 106M 63/106 59.4% 106/94230402 0.0% 0/106 0.0% 28349195 NA +3068 chr4 + 190214555 101470362 101470361 101470449 88 ATACATATGTGTATATATAGACACATATATACACATATATACATATGTGTATATATAGACACATATATACACATATATACATATGTGT chr4 - 94230402 27943543 27943542 27943628 66286775 66286774 66286860 86 ATACACTGGTGTACACATG--CACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .....:xx.....:.:..:--....x:.:.:..x....::....:.:...::x:...x.:x..x..:.x......:..x..:.:.... 19M2D67M 57/86 66.3% 86/94230402 0.0% 2/86 2.3% 73526819 NA +3010 chr4 + 190214555 101470367 101470366 101470419 53 TATGTGTATATATAGACACATATATACACATATATACATATGTGTATATATAG chr4 - 94230402 49414752 49414751 49414804 44815599 44815598 44815651 53 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATAG .:.......:.:......x.....:......x:...::....:::.:.:.... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 52055615 NA +3010 chr4 + 190214555 101470405 101470404 101470457 53 TATGTGTATATATAGACACATATATACACATATATACATATGTGTATATATAG chr4 - 94230402 49414752 49414751 49414804 44815599 44815598 44815651 53 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATAG .:.......:.:......x.....:......x:...::....:::.:.:.... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 52055653 NA +3344 chr4 + 190214555 101470518 101470517 101470607 90 ATACATATGTGTATACATAGACACATATATATACACATATATACATATGTGTATACATATATACATATATACACACATATACATATGTGT chr4 - 94230402 27943543 27943542 27943628 66286775 66286774 66286860 86 ATACACTGGTGTACACATG----CACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .....:xx.....:....:----..:.x:.:.:..x....::....:.:...::x.......x..x..:.x....:.:..x..:.:.... 19M4D67M 59/86 68.6% 86/94230402 0.0% 4/86 4.7% 73526975 NA +3679 chr4 + 190214555 101470576 101470575 101470663 88 ATATACATATATACACACATATACATATGTGTATACATATATACATATATATATACATATGTGTATACATATATACATATATATACAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT-------TCTGTAGATGTATAGATAGATAGGTGTACAT .........:..........::...:x.....:..::...:..:x.....-------.x...:x..::...x...x...x:.:..... 50M7D31M 60/81 74.1% 81/94230402 0.0% 7/81 8.6% 39985203 NA +3153 chr4 + 190214555 101470597 101470596 101470669 73 TACATATGTGTATACATATATACATATATATATACATATGTGTATACATATATACATATATATACATATGTGT chr4 - 94230402 32959562 32959561 32959634 61270769 61270768 61270841 73 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .:..xx......:x:...:..:x:.:.x.:.:...:.::..:..............x......x...:xx... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 68511035 NA +3353 chr4 + 190214555 101470598 101470597 101470671 74 ACATATGTGTATACATATATACATATATATATACATATGTGTATACATATATACATATATATACATATGTGTAT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x..:...:..:......:...:.:.x..........x.x.:..:::..:.::x.::..:.:x........:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 29840466 NA +3037 chr4 + 190214555 101470608 101470607 101470663 56 ATACATATATACATATATATATACATATGTGTATACATATATACATATATATACAT chr4 - 94230402 48829765 48829764 48829820 45400583 45400582 45400638 56 ATACATATATACATAAATGTATACATCTGTGTGTGCATGTGCAGTTACATTTCCAT ...............x..:.......x.....:.:...:.::.xx..:..x.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 52640843 NA +3061 chr4 + 190214555 101479161 101479160 101479212 52 TTGTTTGTTTGTTTGTTTGTTTTTCCTCTAGACAGGGTTTCCCTCTGTTGCC chr4 - 94230402 79586950 79586949 79587001 14643402 14643401 14643453 52 TTTTTTTTTTGTTTGTTTGTTTTTCCTTTAAACAGGCTCTTCCCCTAATCCC ..x...x....................:..:.....x.:.:..:..:x.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 21892211 NA +3430 chr4 + 190214555 101479537 101479536 101479610 74 CTACAACATCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:.x:xx:x..:.::........::x...x.xx.x........::.:.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 83282411 NA +3139 chr4 + 190214555 101489171 101489170 101489204 34 TGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT chr4 - 94230402 65759189 65759188 65759222 28471181 28471180 28471214 34 TGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 35729982 NA +3158 chr4 + 190214555 101516056 101516055 101516160 105 CAGTTAAAGTATATTTGAGCAAATACATGTGTAGGACCTGAAAGAAAAAGCCTTTATATGAGAAAACAACATGTAAGTATCAATAAGTAAGAGAAAAGAAGTGTG chr4 - 94230402 3561368 3561367 3561472 90668931 90668930 90669035 105 CATTGAAAATACATTTGAGCAAATAAAGGTATATTATCTGAAAAAAATATGCATTATCTGAGAGACTGTGAAGTATGCTAGATTGAATGGAAAGGAAAAAATGTG ..x.x...:..:.............x.x..:..xx.:......:...x.xx.x....x.....:.x::xx.x...x.:xxx.x.:.:.:::.:::..:..:.... 105M 66/105 62.9% 105/94230402 0.0% 0/105 0.0% 97954688 92259867 +3556 chr4 + 190214555 101596290 101596289 101596370 81 TATTATTTATATA-TATTATTTATATATTATT-TATATATAATA--TATATTATATATAATATATATTATATATAATATATATAT chr4 - 94230402 67910059 67910058 67910143 26320260 26320259 26320344 85 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT .....:x....:.-..:..xxx.....:....-x...:......--......:......:.......x....:..:......:.. 13M1I18M1I11M2I39M 65/81 80.2% 85/94230402 0.0% 4/81 4.9% 33686231 NA +3087 chr4 + 190214555 101664781 101664780 101664838 58 CTCAAAAAAGGAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAGAAAAGGAAGAGAGA chr4 - 94230402 7711347 7711346 7711404 86518999 86518998 86519056 58 CTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGA ..x...:x..:....:................:.xx:...x....:.:...:.::... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 93953434 NA +3185 chr4 + 190214555 101674859 101674858 101674959 101 TGGCATGATCTTGGCTCACTGCAACCTCCACCTGCCAGATTCAAGTGATTCTCATGCCTCAGCCTCCCTAGTAGATGGGATTACAGGAGCTCACTACCACT chr4 - 94230402 18197114 18197113 18197203 76033200 76033199 76033289 90 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC-----ACCACT ......x..x..------..:..:..:xx.x..x.::.:........x...x..x.x........::.x.....x...:.:....x.x..-----...... 12M6D72M5D6M 66/90 73.3% 90/94230402 0.0% 11/90 12.2% 83477745 NA +3305 chr4 + 190214555 101710335 101710334 101710401 67 TGCATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTGTGTGT chr4 - 94230402 71630139 71630138 71630205 22600198 22600197 22600264 67 TGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .....::.....:.:.:.:.x.....:....x.x.:....::.....x..::....x:::....... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 30080196 NA +3113 chr4 + 190214555 101710340 101710339 101710397 58 ATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTGT chr4 - 94230402 19704280 19704279 19704337 74526066 74526065 74526123 58 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...:.......::.......x.:.:...:.x:...............x:.x.xx.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 82006060 NA +3221 chr4 + 190214555 101710346 101710345 101710398 53 ATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.......x.....:...x::........:..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 82006072 NA +3230 chr4 + 190214555 101710348 101710347 101710400 53 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.......x.....:...x::......:....... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 82006074 NA +3239 chr4 + 190214555 101710350 101710349 101710410 61 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTATATGGG chr4 - 94230402 19704274 19704273 19704334 74526069 74526068 74526129 61 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGG ..x..x...:.......::.....:.x.....:...x::....:.........x..x.x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 82006076 NA +3061 chr4 + 190214555 101715505 101715504 101715566 62 GAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAATTTTTAGCAAAC chr4 - 94230402 25738861 25738860 25738919 68491484 68491483 68491542 59 GACACTCCCTGTTAAGGAGAGTAAAAAAAAAAAAAAGAGAGAAAAAAGA---CTTAGAAAAC ..x.....x.x.:..::.:.:x................:..........---:....x.... 49M3D10M 47/59 79.7% 59/94230402 0.0% 3/59 5.1% 75976644 NA +3170 chr4 + 190214555 101718313 101718312 101718395 83 AACAACTCAGCAGCAACAAACAAACAAACATAAAAACAATCCAATTAAAAAATGG----GAAAATTATCTTA----GTATATTTTGTGTTG chr4 - 94230402 67549882 67549881 67549972 26680431 26680430 26680521 91 AATAGTTTAAAAACAGCAAACAAACAAAGAAAAAAACAATCCACTTCAAAACTGGAGATGCAATTTACCTCAATGGGTACATCTCAAGTTG ..:.::.:.:x.:..:............x.x............x..x....x...----.x..x...:..:.----...:..:.::x.... 55M4I13M4I15M 61/83 73.5% 91/94230402 0.0% 8/83 9.6% 34168431 NA +3304 chr4 + 190214555 101724916 101724915 101724976 61 CATACCCGAGATATATATATATATATATCTATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 8681922 8681921 8681982 85548421 85548420 85548481 61 CATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTT ...::.:..x...x..........:...x:.:.:.:...:.....xx.:............ 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 93042994 NA +3010 chr4 + 190214555 101724925 101724924 101724976 52 GATATATATATATATATATCTATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 8681929 8681928 8681980 85548423 85548422 85548474 52 GATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTT ......x..........:.x.::.:.:.:...:.....x:.:.......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 93042996 NA +3233 chr4 + 190214555 101735323 101735322 101735390 68 CTTACCATTAATCCAGAAATTGTACTTGTAGATTTTTTGTTTGTTTGTTTGTTTTCTTTTCTTTTAGA chr4 - 94230402 34237833 34237832 34237900 59992503 59992502 59992570 68 cttagcatttctgctacaTTTGTTCTTGTTGGTTTTTTGTTTGTTTGCTTTTCTTTTTTCATTTTAGA ....x....xx.x.x:x.x....x.....x.:...............:..x.:..:...:x....... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 67497490 NA +3495 chr4 + 190214555 101748720 101748719 101748827 108 TATATACACATATATACATATATACACATATATACATATATACACATATGTATACATATATAGACATATATACATATATACACATGTATACATATACACACATATATA chr4 - 94230402 73121104 73121103 73121209 21109194 21109193 21109299 106 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATAC--GCCCACAGAGACACACATGTATA .::..:..:..x:.....:.........x.x::.::x:..:.:..:...:x:....::x:..x.::.:x:........x.:..--.:x:...x.x........:.... 83M2D23M 67/106 63.2% 106/94230402 0.0% 2/106 1.9% 28627616 NA +3094 chr4 + 190214555 101748738 101748737 101748789 52 TATATACACATATATACATATATACACATATGTATACATATATAGACATATA chr4 - 94230402 52279024 52279023 52279075 41951328 41951327 41951379 52 TATATACTTATATATACATATGCATACATATGTGTACGTTTCAAGACATACA .......x:............::.:........:...:.x.xx.......:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 49469714 NA +3632 chr4 + 190214555 101748763 101748762 101748940 178 ACATATGTATACATATATA---GACATATATACATATATACACATGTATACATATACACACATATATACATATATACACATATGTGTATATATGTATATATACACATATATGTATATATG-TATATATACACATATATGTAC---GCATAGGTACACATATGTGTACATATATACACACATATAT chr4 - 94230402 4417318 4417317 4417495 89812908 89812907 89813085 178 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTG--CACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACA-----ACACACAGAAAT ....::x.:.x....x.x.---..x..x..x.............:::.:...x:x...:..::..:x:x:.x.:--.....:.:.xx.x::..x..x............x.:.x......-:.:.x.:..xx.:....:x..---...xx.x.x..:::x........-----.......x.x.. 19M3I52M2D44M1I21M3I23M5D12M 113/171 66.1% 178/94230402 0.0% 14/171 8.2% 97331445 92883110 +3657 chr4 + 190214555 101748813 101748812 101748892 80 ATACACACATATATACATATATACACATATGTGTATATATGTATATATACAC-ATATATGTATATATGTATATATACACAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACAT ...:...:.:...:...:..::....x.:.......:.......x....:x.-:..x.......x..:x...x:.::.... 52M1I28M 58/80 72.5% 81/94230402 0.0% 1/80 1.2% 40263440 NA +3390 chr4 + 190214555 101748883 101748882 101748966 84 ATATACACATATATGTACGCATAGGTACACATATGTGTACATATATACACACATATATACATATATACACATATATACATATAT chr4 - 94230402 27943543 27943542 27943626 66286777 66286776 66286860 84 ATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGT ...:..xx:.:..:::.:...:....:::..x..:..:....:...:::.x.......x..x..:.x......:..x..:.::. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 73805340 NA +3433 chr4 + 190214555 101749112 101749111 101749234 123 ATAATATATAATATATAAAGTAAATATAATATAATAATATATATAATATTTATATATAAATATGTATATTATATATGTGTATATATAATATATAAATATGTATATTATATATGTGTATATATA chr4 - 94230402 16155665 16155664 16155770 78074633 78074632 78074738 106 ATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATA--------ATATACATCTATATACTAT---------CATACAATATACAATTATATAAATTACATATGGATGTATACA ...x....:.:...xxx..:.xx...xx...:.:...x:......--------.....x..x.:....:...---------:...:......:..x...:..x....:.....x:.:....:. 45M8D19M9D42M 76/106 71.7% 106/94230402 0.0% 17/106 16.0% 85593447 NA +3570 chr4 + 190214555 101749166 101749165 101749243 78 TATAAATATGTATATTATATATGTGTATATATAATATATAAATATGTATATTATATATGTGTATATATACTATATATT chr4 - 94230402 65187298 65187297 65187375 29043028 29043027 29043105 78 TATACTTGTGGATATTATATTTATGGATAGATGATATATATATATGGATATTATACTTATGGATATATTATGTGGATT ....xx.:..x.........x.:..x...x..:.......x.....x........:x.:..x......xx.:.:x... 78M 58/78 74.4% 78/94230402 0.0% 0/78 0.0% 36561868 NA +3160 chr4 + 190214555 101837807 101837806 101837936 130 TAAAGACATTTGATCAGGATATTTTTAGCTGTGTTTGTAAAAGCATT-----CTGTATACGACTCTGGATAGCTTTTCTCCTCTCCCT---CTCCCTCTCCCTCT----CCCCCTTCTCTCTCCCCCTTTCCCTCTTCTCTC chr4 - 94230402 90116914 90116913 90117046 4113357 4113356 4113489 133 TGAACACACTTTCTTGGGACATATTTAA---------TAAAGGTACTTTTGCCCATCTTTCACCTTGACCAACTGTCTTGCACTCCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTC .:..x...:..xx.::...:..x....:---------....:.:.:.-----.::.x.x:x..::..:x:.:..x.::.x.x......---...:.....::...----......:..:..:........x.:...:..:.. 28M9D10M5I36M3I14M4I33M 81/121 66.9% 133/94230402 0.0% 21/121 17.4% 11720893 NA +3845 chr4 + 190214555 101837867 101837866 101837941 75 TGGATAGCTTTTCTCCTCTCCCTCTCCCTCTCCCTCTCCCCCTTCTCTCTCCCCCTTTCCCTCTTCTCTCTCCCT chr4 - 94230402 20485611 20485610 20485685 73744718 73744717 73744792 75 TGACTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTT ..:x.x.....:.x..:..x..:.x...:.:....:.:......:.....::...:..:..::....:.:...:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 81352256 NA +3120 chr4 + 190214555 101839905 101839904 101839994 90 CAAGATAGCTACTATATAATTTCAAATATTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 4942549 4942548 4942629 89287774 89287773 89287854 81 CAAGATGGC---------ATTTCTAATCATTGGTTTTGTGTTTTTTGTTTTTTTTTTTCCCTTTCCTTCTTTAAGTTCCTTTTACACAGA ......:..---------.....x...xx..::....x.x......x...........:::...::..:...xxx..::...x.x..... 9M9D72M 59/81 72.8% 81/94230402 0.0% 9/81 11.1% 96897356 93317199 +3005 chr4 + 190214555 101847198 101847197 101847253 56 AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATAGTGAGTTA chr4 - 94230402 7002320 7002319 7002375 87228028 87228027 87228083 56 AGTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATGATGTATTA ..........xx...........x.x.......:::x.:...:....::..x:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 94844878 NA +3020 chr4 + 190214555 101884881 101884880 101884925 45 CTGGAAGGTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTTCT chr4 - 94230402 70077237 70077236 70077281 24153122 24153121 24153166 45 CTAGAAGTTAGAGGTTTGTTTGTTTGTTTTGTTTTGTTTTTTTCT ..:....x.xxxx................................ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 31807644 NA +3514 chr4 + 190214555 101936321 101936320 101936433 113 GTATCCATACATATATATGTACATATACATGTATACATACATGCATATATGTGTGCATACATGCATACATGCATGTATATATGTGCGTATGCATGTATACATGCATGTATAAG chr4 - 94230402 73121101 73121100 73121211 21109192 21109191 21109302 111 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCC--CACAGAGACACACATGTATAAG ..:.x...:.....x:..::.........::x.x:...:x:.:....::.:.:x.:.:..:x.:...::..x:.::.....x:.:..:x--..::x.x...::.......... 89M2D22M 68/111 61.3% 111/94230402 0.0% 2/111 1.8% 28815220 NA +3022 chr4 + 190214555 101941724 101941723 101941768 45 TGCTTTCAGATGTGTGTGTACACACACACACACACACATATGCTT chr4 - 94230402 66904840 66904839 66904884 27325519 27325518 27325563 45 TGTTTTCATATATGTACGTACACACACATACACACACACATATTT ..:.....x..:...::...........:.........:..::.. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% 35036884 NA +3379 chr4 + 190214555 101944021 101944020 101944064 44 TTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982311 18982310 18982354 75248049 75248048 75248092 44 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:.x................x...................::.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 82961710 NA +3627 chr4 + 190214555 101944021 101944020 101944062 42 TTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982313 18982312 18982354 75248049 75248048 75248090 42 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:....................................::.. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 82961708 NA +3498 chr4 + 190214555 101944021 101944020 101944058 38 TTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ............:......................... 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% 20314959 NA +3162 chr4 + 190214555 101944023 101944022 101944060 38 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x.................::.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 82961706 NA +3102 chr4 + 190214555 101944025 101944024 101944060 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 20314961 NA +3004 chr4 + 190214555 101957813 101957812 101957860 48 TGTGTTTTTGTTTTTTGTTTTTTGTTTTTTGCTTTTTTTTTTTTTTTT chr4 - 94230402 60385941 60385940 60385988 33844415 33844414 33844462 48 TATATTGTTGTTTTTTTGTTGTTGTTTTTTGCTTTTTTTTTTTACTTT .:.:..x.........xx..x......................x:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 41571872 NA +3455 chr4 + 190214555 101986774 101986773 101986870 97 AAATTATATATGTGTGTATATATATGTGTATATATATG-TATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGT chr4 - 94230402 35554919 35554918 35555016 58675387 58675386 58675484 98 AAAGTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT ...x...:.x.x.x...x.x..:.xx.x..x:....x.-..x......x..x:.:.:.:..:.:....:x.............:...:.x.x...... 38M1I59M 68/97 70.1% 98/94230402 0.0% 1/97 1.0% 66431855 NA +3303 chr4 + 190214555 101986798 101986797 101986870 73 TGTGTATATATATGTATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGT chr4 - 94230402 37363040 37363039 37363111 56867292 56867291 56867363 72 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTAT ......:...:x........:...:::.x......xx:.:...........:...x:::.:.:.-......:. 64M1D8M 52/72 72.2% 72/94230402 0.0% 1/72 1.4% 64623758 NA +3092 chr4 + 190214555 101986808 101986807 101986878 71 TATGTATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGTGTATGTGT chr4 - 94230402 52481236 52481235 52481306 41749097 41749096 41749167 71 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATAT ..::.:x.....x.:...:..:........:...:.:::...:xx..:..x.:x...........x.:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 49505572 NA +3007 chr4 + 190214555 101986825 101986824 101986888 64 ATATATATGTATATATATGTGTATATATATGTATATATATATGTGTGTATGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x..::.......:..:.....x.:.....:.x:..:.......:....x:.x.xx.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 82282551 NA +3181 chr4 + 190214555 101986828 101986827 101986898 71 TATATGTATATATATGTGTATATATATGTATATATATATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::..:..::....::::.:.:.x..:..:....x.x...:..:......x..::....x:.:....... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 30356693 NA +3150 chr4 + 190214555 101986832 101986831 101986886 55 TGTATATATATGTGTATATATATGTATATATATATGTGTGTATGTGTGTGTGTGT chr4 - 94230402 37363040 37363039 37363094 56867309 56867308 56867363 55 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTAT ...:..:...:x........:...:.:.x......xx......:.....:...:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 64623792 NA +3114 chr4 + 190214555 101986866 101986865 101986926 61 TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .....::x.:.:::..x....x.....::...:.......:.......:.x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 69027298 NA +3036 chr4 + 190214555 101986880 101986879 101986919 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 12165598 NA +3647 chr4 + 190214555 102003918 102003917 102004006 89 CATATATGTATATGTGTATATACGTATATATACACACATATATGTGTATACATCTATATACATACACATATACATATATGTATATATAA chr4 - 94230402 8395787 8395786 8395871 85834532 85834531 85834616 85 CATGTGTGTATGTGTGCATAAACATGTATTTACA----TATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ...:.:.....:....:...x..:.:...x....----...:.:..:x.....:x...:...:.....:.:...x.:.::x..:x.... 34M4D51M 60/85 70.6% 85/94230402 0.0% 4/85 4.7% 93608131 NA +3353 chr4 + 190214555 102003943 102003942 102003997 55 ATATATACACACATATATGTGTATACATCTATATACATACACATATACATATATG chr4 - 94230402 56650830 56650829 56650884 37579519 37579518 37579573 55 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG .:..x.:....xx......:..:.:...:..............:.:.:....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 45353113 NA +3036 chr4 + 190214555 102053287 102053286 102053356 70 CAGGAAAAAGTAAGGAGAGTTGCTCATGTTTAAAAGCACCCTAGCAAATCTTTTTGATTATAAGGAAAAA chr4 - 94230402 18117473 18117472 18117542 76112861 76112860 76112930 70 CAGGAAGAAGGGAGGAGAGTCACTCTAACCTATCAGTATCCTAGGAAATCTTCTTGTTTTCAGTGGAAAA ......:...x:........::...xx:::..xx..:.:.....x.......:...x..x:.:x.:.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 83935814 NA +3382 chr4 + 190214555 102057276 102057275 102057379 104 TGCTCTCTCTCTCTTTCTCTCTTTCTCTCTCCCTGTTTCTCTATTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCGCTTTCTCTCTCTCTCTCTTTTTTTTTCT chr4 - 94230402 43081923 43081922 43082024 51148379 51148378 51148480 102 TGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACC--CTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ....x..:...::....::.:...:......x.:--:..:x.:..:.x:.::xx:...xxx:....x.:...:..x..:.........x.xx...:..:..... 34M2D68M 66/102 64.7% 102/94230402 0.0% 2/102 2.0% 58975353 NA +3589 chr4 + 190214555 102057278 102057277 102057363 86 CTCTCTCTCTCTTTCTCTCTTTCTCTCTCCCTGTTTC--------TCTATTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCGCTTTCTCTCTCT chr4 - 94230402 43081931 43081930 43082024 51148379 51148378 51148472 94 CTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...::.:..::...:.:...:..x.:....x....:.--------...:xx::...x.:...:.....:.........x.x....::...:... 37M8I49M 60/86 69.8% 94/94230402 0.0% 8/86 9.3% 58975347 NA +3043 chr4 + 190214555 102070861 102070860 102070922 62 GTGGGTACATGGCCATATGTATTTCTCAAAAATCATCAACCTCTTTCCTTATAAATAATTGA chr4 - 94230402 30527362 30527361 30527423 63702980 63702979 63703041 62 GTGGTTACAAAACCATATCCATTTTTAAAAAATCATCAACAAATGTAATTATAAATAGTTGA ....x....x::......x:....:.x.............xxx.x.xx.........:.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 71543499 NA +3152 chr4 + 190214555 102074783 102074782 102074821 39 ATTGCTTCTCGGCCTTTTGGCTAAGATCAAGTGGAGTAT chr4 - 94230402 56292881 56292880 56292919 37937484 37937483 37937522 39 ATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAGTGT ...........x.....................x...:. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 45781902 NA +3420 chr4 + 190214555 102081500 102081499 102081590 91 TTTTGGCAAGCAAGAAGAAGAAAGGAAGAAAGAA-------------GAAATGAAGAGAAGAAAGAAAAAGAGAAAGAAAGAAAGAGAGACAGAGGGAAGGAAG chr4 - 94230402 54827382 54827381 54827485 39402918 39402917 39403021 104 TTCCAGAAAAAAAAGGCAAGAAAGGGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAG ..:::.x..:x..:::x........:.x...x..-------------.x.:..:........x..x..x..xx...:::..:..:.........:......... 34M13I57M 64/91 70.3% 104/94230402 0.0% 13/91 14.3% 47254118 NA +3285 chr4 + 190214555 102081511 102081510 102081666 156 AAGAAGAAGAAAGGAAGAAAGAAGAAATGAAGAGAAGAAAGAAAAAGAGAAAGAAAGAAAGAGAGACAGAGG--GAAGGAAGGAAGGAAGGAAGG-----GGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGA-GAAAAGGAAGGAAGG chr4 - 94230402 29503818 29503817 29503981 64726422 64726421 64726585 164 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAATGTAGG ..:....:.:......:.:....::..xx:...:.:....:.....xxxx.x:....:......:.::..:x--:..x..x::x.:.x..:....-----::..xx:x::.:..x:...x..:...xx...::.xxx.::.x..:...-...:.:...x.x... 72M2I21M5I48M1I15M 94/156 60.3% 164/94230402 0.0% 8/156 5.1% 72577693 NA +3540 chr4 + 190214555 102081512 102081511 102081590 79 AGAAGAAGAAAGGAAGAAAGA---------------------AGAAATGAAGAGAAGAAAGAAAAAGAGAAAGAAAGAAAGAGAGACAGAGGGAAGGAAG chr4 - 94230402 54828363 54828362 54828462 39401941 39401940 39402040 100 AGAAAAAAAAGGCAAGAAAGAGACAAACAAAGCTTGGCTGTGAGCAGTGGAGAGAAGACAGCAACAGTCAAAAGGAGGAAAAGAGACAGAAGGAAGGAAG ....:..:..:.x........---------------------..x.:..:........x..x..x..xx...:::..:..:.........:......... 21M21I58M 61/79 77.2% 100/94230402 0.0% 21/79 26.6% 47253149 NA +3258 chr4 + 190214555 102081515 102081514 102081642 128 AGAAGAAAGGAAGAAAGAAGAAATGAAGAGAAGAAAGAAAAAGAGAAAGAAAGAAAGAGAGACAGAGGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAA chr4 - 94230402 91112789 91112788 91112916 3117487 3117486 3117614 128 AAAAGACTGAAGGAAAGCCAAAACGAATGTGAAAGTGGGCAGTCAAAAGGAAAAAGAACAAACAGGAAGGCTGGTGGGTGGATGGAAGGGGAACAAAGGGAACCTGAGGCAAGGAGGTGAACTGGGAA .:....xx.:.:.....xx:...:...x:x:.:.:x.::x.:xx:....:..:..::.x.:....:::.:xx.:x..:x...x..........x::.:....xxx....x.:.:...x..:xx..... 128M 74/128 57.8% 128/94230402 0.0% 0/128 0.0% 10968726 NA +3082 chr4 + 190214555 102081558 102081557 102081651 94 AGAAAGAAAGAAAGAGAGACAGAGGGAAGGAAGGAAGGAAGGAAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGA chr4 - 94230402 10903375 10903374 10903468 83326935 83326934 83327028 94 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGA ......:.::..::.:.......:::.x.x...:.x:..:xx:.:x.:...:...:.......:.xx..:...:x:.:..x..x:::x..:... 94M 56/94 59.6% 94/94230402 0.0% 0/94 0.0% 91178183 NA +3110 chr4 + 190214555 102081591 102081590 102081705 115 GAAGGAAGGAAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGAGAAAAGGAAGGAAGGAGAGAGAGAA-----------GAAAAGAAAAAAGAGAAAGAAAGAAAGAG chr4 - 94230402 40465775 40465774 40465900 53764503 53764502 53764628 126 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGAG .:..:.:...x.:x:.:::x:..:.....x..::.:.x.:.:.:::.x..:x.x.:......::..:..:.:........:.::..-----------....xx...xx.:.:x..x.x.:...... 86M11I29M 69/115 60.0% 126/94230402 0.0% 11/115 9.6% 61615816 NA +4293 chr4 + 190214555 102081600 102081599 102081747 148 AAGGGGAAGGGAAGGAAAGGGAGGAAGGAAGGAGAGGAGGGAAGGGAAGGGAGAA----------AAGGAAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGA-AAGAGGGAGGGAGGAGGGAGGGAGGAAGGAAGGAAGGAAGAGAGGAA chr4 - 94230402 44053978 44053977 44054136 50176267 50176266 50176425 159 AGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .:..:x.x.x....:.x:.:.::...:...::::.....:x...::..x..:..:----------...:...:...:...x.:.:.x...x.x...:..x........x:.-:x:.::.x...x...x::...:..:.....::.x..x:...x..:.. 55M10I46M1I47M 93/148 62.8% 159/94230402 0.0% 11/148 7.4% 58027622 NA +3085 chr4 + 190214555 102081656 102081655 102081712 57 AGGAAGGAAGGAGAGAGAGAAGAAAAGAAAAAAGAGAAAGAAAGAAAGAGGGAGGGA chr4 - 94230402 3302522 3302521 3302578 90927825 90927824 90927881 57 AGGAGGAGAAGAAAAAGAGAAAAATTGAAAGAAAAAAAAAAAAGAATGGGGGAGGAA ....:.::.:..:.:......:..xx....:..:.:...:......x.:......:. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 98779134 91435421 +3001 chr4 + 190214555 102156028 102156027 102156106 79 ATTAAAAGTTTTGTATAATTCAACAGTATGATATATATATATATATTTATATACTATATATATTACATATATATATATA chr4 - 94230402 40642456 40642455 40642534 53587869 53587868 53587947 79 ATTGAAGGTTCAGTATAACACAAAATGTTTATATACATATATATGTATATATAACATCTCCATTAGATGCATGTGTGCA ...:..:...:x......:x...x.xxx.x.....:........:.x......x:..x.x:....x..::..:.:.::. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 61513572 NA +3378 chr4 + 190214555 102157845 102157844 102157927 83 CAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAAA chr4 - 94230402 83671941 83671940 83672023 10558380 10558379 10558462 83 CAAAACGCTGCTTTGTGTCAAGACAAGAAAAAAATAAGGAAAAGGAAAAAAAAACAATGGAAAGCATGAAATGCAAAAGAGAA ..:.::.xx:..::..x....:.x..:.......x..::...:::...:.....x..x:.....x.x....x.x......:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 18485904 NA +3251 chr4 + 190214555 102157864 102157863 102157950 87 AAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAAAAAATTCATGCGACCCTTCAGAAA chr4 - 94230402 22042116 22042115 22042202 72188201 72188200 72188287 87 AGACAAAAAAAAAAAAAAAAAAAGTGCAGAGAGGAGAAACCCAGAAAGGAAGTTACATAGAGAAACATTAAAGCAAATCTTCAGAGA .:.x....................x:x.:::.::.....xxx.::..:...:xx.x.x...:...x...x.x..:.x:.......:. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 80115748 NA +3260 chr4 + 190214555 102157869 102157868 102157931 63 AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAAAAAAT chr4 - 94230402 24662130 24662129 24662192 69568211 69568210 69568273 63 AAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAAT ....................xx:.::x:.:.......:.x.:..:.:...x....:.::.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 77495739 NA +3061 chr4 + 190214555 102157874 102157873 102157930 57 AAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAAAAAA chr4 - 94230402 7711349 7711348 7711405 86518998 86518997 86519054 57 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ....:x.:...........:..........:.xx....x..:...:::..::..:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 94446525 NA +3063 chr4 + 190214555 102162942 102162941 102163001 60 CAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAAGAAAAAAAGAAGG chr4 - 94230402 38421704 38421703 38421763 55808640 55808639 55808699 60 CAAAAGGAAAAGGGAAGTAAGTAAATAAATAAATAGACAAATTGAAGAAAAAAAGGAGAG .....x:..x.::x..:...:..............:.:....x:..::......:..::. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 63741238 NA +3022 chr4 + 190214555 102164571 102164570 102164620 50 AATTAAGTGTTAAGGATGACTTTTGTTTGTTTGTTTGTTTGTTTTTTGAG chr4 - 94230402 68819489 68819488 68819538 25410865 25410864 25410914 50 AATTTAACATTGAGGGTTGTCTTTTTTTGTTTGTTTGTTTGTTTTTTGAG ....x.:::..:...:.x:::...x......................... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 33345082 NA +3955 chr4 + 190214555 102173453 102173452 102173582 130 TAAGTTATATATCT----AAACCTAAACTTTTACCACCCTGAGCAATGTGGCAAAACCCCATTTCTA---GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTATGCTGGATATGGTGGCACAGCACC-TGTAGT chr4 - 94230402 34388148 34388147 34388284 59842119 59842118 59842255 137 TAAACTATAAATCTGGGAAAATCCAGACATCT-TCATTCTGGACAATGAATTGATTCTACATTTCTACATTTAAGGAAAAAAAAAAAACACAAAAAACAAAAACCAAACCTGGATCCAGTGGCTCAGAATTATGTAGT ...::....x....----...:.:.:..x.:.-:..::...::.....x:x::.xx.:x........---x...::............x.x......x.......x.xx......x::.....x...x.::-...... 14M4I14M1D34M3I61M1I6M 91/129 70.5% 137/94230402 0.0% 9/129 7.0% 67785305 NA +3394 chr4 + 190214555 102181781 102181780 102181849 69 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTCCATACTAGAAACAGGCAGGA chr4 - 94230402 26643719 26643718 26643787 67586616 67586615 67586684 69 CAAAGTACAGTTAAAAAGAAAAAAAGAAGAAGAAAAAAGAAAAGTTCTCGATGCTAAGATCAGCTAGGA ....:x.x.:xx.....:.......:..:..:......:....:.....x..:...::.x...x:.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 75538062 NA +3048 chr4 + 190214555 102181789 102181788 102181844 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTCCATACTAGAAACAGG chr4 - 94230402 45031404 45031403 45031459 49198944 49198943 49198999 56 AAAAAAAAAAGAACAGAAAAGTAAAAATGAAAACAATGCTCTGTGCTAGAATCAGG ..........:..x.:....:x.....x:....x...x...::.:......x.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 57150385 NA +3117 chr4 + 190214555 102197316 102197315 102197382 67 AGTGAGACTCCGTCTCAAAAAACAAACAAACAAACAACAACAATAACAAAAATCAGAAGGAGACAAA chr4 - 94230402 18021876 18021875 18021942 76208461 76208460 76208527 67 AGTGGGAATGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAA ....:..x.xx:..xx.....:x....................:........xx.:x...::.x:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 84175440 NA +3050 chr4 + 190214555 102350112 102350111 102350163 52 TATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398822 33398821 33398873 60831530 60831529 60831581 52 TGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:.:::.:.:.:....:.:.......:.:.............x.....x... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 68951290 NA +3295 chr4 + 190214555 102357694 102357693 102357807 114 GAGAGAGAGTGAGCAGGGAGGAAGGGGGGGAGAGAGAGA-----------GAGAAAGAAAGAAAGAAAGAGAGAGAGAGAG-------AAAGAAAGAAAGAGAAAGAGAGAGAGAAATAAAGAGAGAAAGAA chr4 - 94230402 7656631 7656630 7656762 86573641 86573640 86573772 132 GAGAGGCTGTGAGAAACGAAGAAGGCAGGGGGAGAGAGAAAGCTTCCATTGGGGAAAAGAGAAGGGAAGGGATGTAAAATACCACACCAAAGAGAGAAAAACAAATAGAGGTGAAAAAATGGAAAAGCAGAA .....:xx.....x.:x..:.....x:...:........-----------.:.:..:.:....:.:...:..x:x.:.:x:-------.....:.....:.x...x....:x::...x.x:..:.::x.... 39M11I31M7I44M 75/114 65.8% 132/94230402 0.0% 18/114 15.8% 94701063 NA +3109 chr4 + 190214555 102357710 102357709 102357766 57 GGAGGAAGGGGGGGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAA chr4 - 94230402 43294275 43294274 43294331 50936072 50936071 50936128 57 GGGGGGTGGGGGGAAGGGAGAAAGAGGAAAGAAAAAAAAAAAAGGGGGGGAAATAAA ..:..:x......:..:....:....:..::..:...:...:..:.:.:..:.x... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 59063435 NA +3951 chr4 + 190214555 102357726 102357725 102357847 122 AGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGA----GAAAGAAAGAAAGAGAAAGAGAGAGA--GAAATAAAGAGAGAAAGAAAGAGAAAGAAAAGAGAGAGAA--AGAAAGGGAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATA-------GAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:.x.:.:..:..........::.:.:......:...----....:.:x:..:.xxx....x.:...--......-------:.....x...:..:........:.:x.--:......::.....x:... 37M4I26M2I6M7D27M2I19M 83/115 72.2% 123/94230402 0.0% 15/115 13.0% 71824562 NA +3016 chr4 + 190214555 102357800 102357799 102357881 82 AGAAAGAAAGAGAAAGAAAAGAGAGAGAAAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 36691892 36691891 36691973 57538430 57538429 57538511 82 AGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA ..:.:..::...::.:x....::.......:x..x:.:........:...:x....:.:::..:.x.:x..:xx..:.::.. 82M 50/82 61.0% 82/94230402 0.0% 0/82 0.0% 65665908 NA +3176 chr4 + 190214555 102408588 102408587 102408662 75 GTATTATA---TGTATATAAACACATATATGTATATACACATATATAAACACACATATATGTATATATACACATATAT chr4 - 94230402 48167027 48167026 48167104 46063299 46063298 46063376 78 GTATTGCACCTTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .....::.---........xxxx..............x.....:..::...:::::x:..::.:..:.......:... 8M3I67M 53/75 70.7% 78/94230402 0.0% 3/75 4.0% 54241561 NA +3283 chr4 + 190214555 102408614 102408613 102408669 56 TGTATATACACATATATAAACACACATATATGTATATATACACATATATAAACACA chr4 - 94230402 38405797 38405796 38405852 55824551 55824550 55824606 56 TGAATATTCATATAAATAACCACGTATATGTGTATATATATTCATATATAATCACA ..x....x..:...x....x...::....:..........:x.........x.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 64002817 NA +3215 chr4 + 190214555 102408649 102408648 102408701 53 ATATACACATATATAAACACACATATATGTATATATACACATATATAAACACA chr4 - 94230402 38405800 38405799 38405852 55824551 55824550 55824603 53 ATATTCATATAAATAACCACGTATATGTGTATATATATTCATATATAATCACA ....x..:...x....x...::....:..........:x.........x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 64002849 NA +3215 chr4 + 190214555 102408681 102408680 102408733 53 ATATACACATATATAAACACACATATATGTATATATACACATATATAAACACA chr4 - 94230402 38405800 38405799 38405852 55824551 55824550 55824603 53 ATATTCATATAAATAACCACGTATATGTGTATATATATTCATATATAATCACA ....x..:...x....x...::....:..........:x.........x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 64002881 NA +3093 chr4 + 190214555 102408713 102408712 102408765 53 ATATACACATATATAAACACACATACATGTATATATACACATATATAAACACA chr4 - 94230402 38405800 38405799 38405852 55824551 55824550 55824603 53 ATATTCATATAAATAACCACGTATATGTGTATATATATTCATATATAATCACA ....x..:...x....x...::...::..........:x.........x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 64002913 NA +3440 chr4 + 190214555 102408956 102408955 102409043 88 AGCACATATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAA chr4 - 94230402 63997338 63997337 63997412 30232991 30232990 30233065 75 AGTTCATAAACATGTCTGTGTACATGCGCACACATGTATATGTATATGTGCATAC-------------TGTATATAAAAATGCATAAA ..:x....x.:....x.:...:...:.::.x...::...................-------------.......:x:x..:...... 55M13D20M 57/75 76.0% 75/94230402 0.0% 13/75 17.3% 38411618 NA +3308 chr4 + 190214555 102408956 102408955 102409017 62 AGCACATATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACA chr4 - 94230402 38535894 38535893 38535955 55694448 55694447 55694509 62 AATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA .::.:...:.:.:...:...x.x.....:.x.....:..:.....:.:........x:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 63873062 NA +3373 chr4 + 190214555 102408982 102408981 102409071 90 CATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAA chr4 - 94230402 63997342 63997341 63997412 30232991 30232990 30233061 71 CATAAACATGTCTGTGTACATGCGCACACATG------TATATGTATATGTGCATAC-------------TGTATATAAAAATGCATAAA ........::.x.:....:...:...:....:------...................-------------.......:x:x..:...... 32M6D19M13D20M 58/71 81.7% 71/94230402 0.0% 19/71 26.8% 38411640 NA +3157 chr4 + 190214555 102408987 102408986 102409045 59 ACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACA chr4 - 94230402 38535897 38535896 38535955 55694448 55694447 55694506 59 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA .:.:.:.:.:...:...x.x.....:.x.....:..:.....:.:........x:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63873090 NA +3373 chr4 + 190214555 102409010 102409009 102409099 90 CATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAA chr4 - 94230402 63997342 63997341 63997412 30232991 30232990 30233061 71 CATAAACATGTCTGTGTACATGCGCACACATG------TATATGTATATGTGCATAC-------------TGTATATAAAAATGCATAAA ........::.x.:....:...:...:....:------...................-------------.......:x:x..:...... 32M6D19M13D20M 58/71 81.7% 71/94230402 0.0% 19/71 26.8% 38411668 NA +3157 chr4 + 190214555 102409015 102409014 102409073 59 ACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACA chr4 - 94230402 38535897 38535896 38535955 55694448 55694447 55694506 59 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA .:.:.:.:.:...:...x.x.....:.x.....:..:.....:.:........x:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63873118 NA +3373 chr4 + 190214555 102409038 102409037 102409127 90 CATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAA chr4 - 94230402 63997342 63997341 63997412 30232991 30232990 30233061 71 CATAAACATGTCTGTGTACATGCGCACACATG------TATATGTATATGTGCATAC-------------TGTATATAAAAATGCATAAA ........::.x.:....:...:...:....:------...................-------------.......:x:x..:...... 32M6D19M13D20M 58/71 81.7% 71/94230402 0.0% 19/71 26.8% 38411696 NA +3157 chr4 + 190214555 102409043 102409042 102409101 59 ACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACA chr4 - 94230402 38535897 38535896 38535955 55694448 55694447 55694506 59 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA .:.:.:.:.:...:...x.x.....:.x.....:..:.....:.:........x:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63873146 NA +3373 chr4 + 190214555 102409066 102409065 102409155 90 CATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAA chr4 - 94230402 63997342 63997341 63997412 30232991 30232990 30233061 71 CATAAACATGTCTGTGTACATGCGCACACATG------TATATGTATATGTGCATAC-------------TGTATATAAAAATGCATAAA ........::.x.:....:...:...:....:------...................-------------.......:x:x..:...... 32M6D19M13D20M 58/71 81.7% 71/94230402 0.0% 19/71 26.8% 38411724 NA +3157 chr4 + 190214555 102409071 102409070 102409129 59 ACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACA chr4 - 94230402 38535897 38535896 38535955 55694448 55694447 55694506 59 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA .:.:.:.:.:...:...x.x.....:.x.....:..:.....:.:........x:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 63873174 NA +3242 chr4 + 190214555 102409094 102409093 102409179 86 CATAAACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATATGTATATGTGCATA chr4 - 94230402 63997342 63997341 63997410 30232993 30232992 30233061 69 CATAAACATGTCTGTGTACATGCGCACACATG------TATATGTATATGTGCATAC-----------TGTATATAAAAATGCATA ........::.x.:....:...:...:....:------...................-----------.:...:..x.x:...... 32M6D19M11D18M 56/69 81.2% 69/94230402 0.0% 17/69 24.6% 38411752 NA +3166 chr4 + 190214555 102409099 102409098 102409168 70 ACACATATATGTATATGTGCATACATAAACACATATATGTATATGTGCATACATAAACACATATATATGT chr4 - 94230402 38535897 38535896 38535966 55694437 55694436 55694506 70 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT .:.:.:.:.:...:...x.x.....:.x.....:..:.....:.:........x:....x:x::..x... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 63873202 NA +3442 chr4 + 190214555 102409325 102409324 102409463 139 ATATACACATATATGTATGTATGTGCATATACACATATATGTATGTATGTGCATATACACATATGTGTATG----TATGTGCATATACACATATGTGTATGTATGTGCATATACACATATGTGTATGTATGTGCATATACACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACA ..:.:....:..x..:...:.::::..::.x::.::.:.:::...:.x:......:..::.x......:..----:.:x...::.:....:x...:..::x:...x...:.:x::..:---..:xxx.:..:x.....x.... 71M4I43M3D22M 79/136 58.1% 140/94230402 0.0% 7/136 5.1% 13393243 NA +3002 chr4 + 190214555 102409377 102409376 102409448 72 ATATACACATATGTGTATGTATGTGCATATACACATATGTGTATGTATGTGCATATACACATATGTGTATGT chr4 - 94230402 38535895 38535894 38535966 55694437 55694436 55694508 72 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT .....:...:.:..::...x:x:.:..:.......:.............:::.:.x:x...x:x.::.x... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 63873482 NA +3157 chr4 + 190214555 102410579 102410578 102410633 55 ATATATACACACCTATATATGTGTACGTGTATACATATATACACACCTATATATG chr4 - 94230402 56650830 56650829 56650884 37579519 37579518 37579573 55 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG .:..x.:....x......::....:.:.x....:.:...:......x........ 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 45759749 NA +3087 chr4 + 190214555 102410597 102410596 102410681 85 ATGTGTACGTGTATACATATATACACACCTATATATGTGTACGTGTATACATATATACACACATATATATGTGTCCACATATATG chr4 - 94230402 66471210 66471209 66471291 27759112 27759111 27759193 82 ATGGATATGCGCTTGCTTGTCTCCTCTCTTAC---TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATATG ...x:..:.:.:x.:.x.:.x.x.x.x.:..:---.....:...........::...:........:.:.x...xx.:.:..... 32M3D50M 56/82 68.3% 82/94230402 0.0% 3/82 3.7% 35939387 NA +3362 chr4 + 190214555 102410613 102410612 102410667 55 ATATATACACACCTATATATGTGTACGTGTATACATATATACACACATATATATG chr4 - 94230402 56650830 56650829 56650884 37579519 37579518 37579573 55 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG .:..x.:....x......::....:.:.x....:.:...:............... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 45759783 NA +3177 chr4 + 190214555 102410630 102410629 102410680 51 TATGTGTACGTGTATACATATATACACACATATATATGTGTCCACATATAT chr4 - 94230402 49414752 49414751 49414802 44815601 44815600 44815651 51 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACAT .:......:.....x...x............x:......:.x....:.:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 52995878 NA +3885 chr4 + 190214555 102464200 102464199 102464305 106 CGTATACATGTATATACACACATGTATATACATACGC----GTATACATGTATATACACATGTATATACATACGTGTATATATATATATATACACACACACACACACACA chr4 - 94230402 73121100 73121099 73121203 21109200 21109199 21109303 104 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATA------TGTGAGTACATATAAATACGCCCACAGAGACACACA ...:.:....:....x..:...::....:...x.x..----...:.:.:.....x::...:.x:....------...:x:..:.....x....:.x....x.x....... 37M4I27M6D36M 72/100 72.0% 104/94230402 0.0% 10/100 10.0% 29343100 NA +3324 chr4 + 190214555 102464205 102464204 102464268 64 ACATGTATATACACACATGTATATACATACGCGTATACATGTATATACACATGTATATACATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x:......x.....x:..:.:.:.:.:.:.x..:.x......x.......:.....:.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 84943456 NA +3628 chr4 + 190214555 102464220 102464219 102464305 86 CATGTATATACATACGCGTATACATGTATATACACATGTATATACATACGTGTATATATATATATATACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTAT----------GCCTACATTAATACACACACACACACACAGACACA .....:.:..::.::..:..x........x....:......----------.:x..:..xx...:.:.............x..... 41M10D35M 58/76 76.3% 76/94230402 0.0% 10/76 13.2% 94068433 NA +4115 chr4 + 190214555 102464233 102464232 102464307 75 ACGCGTATACATGTATATACACATGTATATACATACGTGTATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:..:..::...::...x........x......:..:.::x..:..xx...:...............x..... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 94068445 NA +3569 chr4 + 190214555 102464234 102464233 102464317 84 CGCGTATACATGTATATACACATGTATATACATACGTGTATATATATATATATACACACACACACACACACACACCATGGAATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::..:.::....:.::.:.x.::.:...x:.:.::.....::x..:..xx...................x....x.xx..... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 94068447 NA +3009 chr4 + 190214555 102485758 102485757 102485803 46 AAAAAAAAAAAAAAGAAAATGGGGGTGGGGAGGACAGAGAGAGGAA chr4 - 94230402 49394851 49394850 49394896 44835507 44835506 44835552 46 AAAAAAAAAAGAAAGAAAATAGAGGGGGGGGGGGCGGGGAAAGAAA ..........:.........:.:..x....:..:.:.:..:..:.. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 53090907 NA +3014 chr4 + 190214555 102502375 102502374 102502427 53 TGCGCGCGCGCGCGCGCACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.:..:.:..:.:.:::.:.:...xx........::............. 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 87537543 NA +3084 chr4 + 190214555 102515085 102515084 102515137 53 ATGTAATATTATTATTATTATTATTTTTTTTTTTTTTTTTTTTTGAGACGGAG chr4 - 94230402 3834827 3834826 3834879 90395524 90395523 90395576 53 ATGTACTTTTGTAATAATTACTCTTTTTTTTTTTTTTTCTTTTTGAGGTGAAG .....x.x..:.x..x....:.x...............:........::.:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 98680258 91534297 +3263 chr4 + 190214555 102526893 102526892 102526967 75 CATTTTCGCTTTTCTCTTTGCTCTCTTTTTCGTGTGTGTGTGTGTGTGTATATATGTATATATGTA---TATGTATAT chr4 - 94230402 19559266 19559265 19559343 74671060 74671059 74671137 78 CATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ......::x....:.:.xxx:x:.:.....:..............:.:.......:....:.xx..---.x....... 66M3I9M 55/75 73.3% 78/94230402 0.0% 3/75 4.0% 82967627 NA +3439 chr4 + 190214555 102526913 102526912 102526972 60 CTCTCTTTTTCGTGTGTGTGTGTGTGTGTATATATGT--ATATATGTATATGTATATACATA chr4 - 94230402 70982619 70982618 70982680 23247723 23247722 23247784 62 CTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ..:.:..::.:..........:........:......--...x....:.:..:...:...:. 37M2I23M 47/60 78.3% 62/94230402 0.0% 2/60 3.3% 31544294 NA +3073 chr4 + 190214555 102526917 102526916 102526961 45 CTTTTTCGTGTGTGTGTGTGTGTGTATATATGTATATATGTATAT chr4 - 94230402 9151849 9151848 9151893 85078510 85078509 85078554 45 CTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ......x................:......x:...x.:.:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 93375068 NA +3252 chr4 + 190214555 102545458 102545457 102545538 81 TCCGCATTTTATAAATGAGGAAATTGAAGCCTAGAGAAATTAAGAAGCTTAACTTGGGTCTCACAGGCTTTTAGAGATGGA chr4 - 94230402 15193226 15193225 15193306 79037097 79037096 79037177 81 TCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAA ...:.........xx..::.:.......:.::...x....x..:x.:...xx..x:....x:....x:.x.:...:..::. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 87352232 NA +3144 chr4 + 190214555 102574095 102574094 102574174 80 TTGAATTTTGTATCGTTAAGTCTTGGATTCCTTTTTTTTTTTTTTTTTTTGATGTGCTTTTAAATACGTTTGAGGATTGG chr4 - 94230402 51460923 51460922 51461002 42769401 42769400 42769480 80 TTACACTCTACACCACTATCTGCAGTACTACTTTTTTCTTTTTTTTTAAATATGTGCTTTGGAATACGTTTAAGAATTGG ..:x.:.:.::.:.::..xx.x:x.x.:.x.......:.........xxxx.........x:.........:..:..... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 51113172 NA +3066 chr4 + 190214555 102625375 102625374 102625508 134 TTTCTCTCTCATTCTTCTTCTCTCCCTTCCTTTTTCCTTTCTCTTTCTCTCCTAGTCTCTTTCTCTCAACTCTTCTCTTTCTCTTTCTTTTTCTCTTTCTCTTTTTCTCTTTCTCCCACCTCTTTCCCCCTTCA chr4 - 94230402 89977893 89977892 89978026 4252377 4252376 4252510 134 TTTCTAACACACACAATCTTTCTTTTTCTCTTTCTCCCTCTTCCTTTTCTCCTATTCTTATGCTGTGCACTTGGTTCTTGTTTTGTCTTGTCAAATTCCTAACTTTTATAGAATCTCACCTCTGTCCTCGTTCA .....xx.x..:x.xx::.:...:::.::....:...:.::..:..:.......x...:x.x..x.xx...:xx:....x:.:.x....x.:xxx..:..xx:...:x:xxxx..:.......x...:.x.... 134M 78/134 58.2% 134/94230402 0.0% 0/134 0.0% 12647482 NA +3074 chr4 + 190214555 102643872 102643871 102643946 75 CATACAAAAGGTATTTTTGTTTTCTGTTTTTGATGACATACAATTTGCCTATTTTTTCTTTGGTTAATTTCTTTG chr4 - 94230402 57602179 57602178 57602253 36628150 36628149 36628224 75 CATGTAAAAGGAATTTTTACTTTATATCTTTGATCATATTTTACCTACTTACCATTTCTTTGGAAATTTTCATTG ...::......x......::...x.:.:......x.:..x:x.::.:.:..::x.........xx.x....x... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 45041693 NA +3067 chr4 + 190214555 102653189 102653188 102653253 65 CATAAACACACGCGCATATGCAGATCTACATGCACACACACACACACACACACACACACACACAC chr4 - 94230402 14964820 14964819 14964884 79265519 79265518 79265583 65 CACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:...:.:::x:..:.:....x.:x.::...:.:.:...xx........::............. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 87688369 NA +3035 chr4 + 190214555 102688257 102688256 102688324 68 CTCCCTGTACATAACTCTGTGCATGTGTGCGTGCGCGCGCACACACACACACACACACACAAACACAC chr4 - 94230402 33416678 33416677 33416745 60813658 60813657 60813725 68 CTCCTTTTAGATGAATTCTTGCATGTTTACGCATTCCCAGACACACACATACACACACAAGGACACAC ....:.x..x..:.x.::x.......x.:..:::x.x.:x.........:.........x::...... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 69271579 NA +3277 chr4 + 190214555 102688335 102688334 102688417 83 TTCCCCTCTCACACACACATACACACTCTTTCTCTCTCTCCCCTCCCCCCTTACACACACACACACACACACACACACACACA chr4 - 94230402 32106681 32106680 32106750 62123653 62123652 62123722 70 TTTCCCTCTTACA-------------TCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA ..:......:...-------------....x:.:..::....::...x.:..x..::::...............:....x... 13M13D57M 52/70 74.3% 70/94230402 0.0% 13/70 18.6% 70581654 NA +3162 chr4 + 190214555 102709198 102709197 102709285 88 AAAAGGCAAGGCAAGGCAGAAAAGGAAAGGAAAGGAAAAAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAAGAAAGAAA chr4 - 94230402 44400475 44400474 44400562 49829841 49829840 49829928 88 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAA ....::...:.::x.xxx.x:.:...::..:::...:.:...:..:.......:.........:.x:.:x.:...x..:xx.x..... 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 58308723 NA +4201 chr4 + 190214555 102709215 102709214 102709402 188 AGAAAAGGAAAGGAAA-GGAAAAAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGA--AGGAAGAAAGAAAGAAAGAAAA chr4 - 94230402 22272879 22272878 22273069 71957334 71957333 71957524 191 AGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAAA ....x...x......:-..:......x.xx..xxxx.x..:::..::::..........:........:xxx....x:.:xx......xx:xx:.::xx....::::x..x:..xx:.:.:......:..:.x:..x:x.....:.:...:.:.x.:.:...x.:..--x.::..:x....x.xx...... 16M1I150M2I22M 113/188 60.1% 191/94230402 0.0% 3/188 1.6% 80436336 NA +4193 chr4 + 190214555 102709234 102709233 102709351 118 AAAAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAAGAAAGAAAGG-----AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:...............::.:.:......:...xx.x:..:..:x.....-----:.x:...:xx.:..x::.:...x..:.....:..:......x:xx:.:.....::.:.:x..:. 54M5I64M 77/118 65.3% 123/94230402 0.0% 5/118 4.2% 72176070 NA +3113 chr4 + 190214555 102709237 102709236 102709313 77 AAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 226471 226470 226547 94003856 94003855 94003932 77 AAGGACAGAATAACAAATGTGAGAGAGAGAGAAAAAAAAAAAACAGTAATTAAAACAGAGAGGAAAAAGAGAAGGGA ...:.x:...x..x:..x.x:...........:...:....:.x..x..xx..::x..::.....::.::.....:. 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 102482766 87731789 +3400 chr4 + 190214555 102709240 102709239 102709375 136 AAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGA--AAAGAAAAAGAAAGGAAG------------------GAAGGAAGGAAGGAAG---AAAAGAAAAGAAAAAGAAAGG chr4 - 94230402 30232163 30232162 30232321 63998082 63998081 63998240 159 AAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAGTTCAAGGCAATCATAGGTAGTATGTTTACTGTGAATGAGATGAACTGAAGGATGTGAAAAAGAAATCAAAAAGAAAAG .....:x:....::x......x:..:..::.xx:.::....:..x..x.........:...x:x:.:..:.:...:...::--x...:x..xx.x...x..------------------..x.:.xx......x.---........xx.........:. 81M2I18M18I16M3I21M 91/136 66.9% 159/94230402 0.0% 23/136 16.9% 72477077 NA +3459 chr4 + 190214555 102709291 102709290 102709369 79 GAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAG-GAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAA chr4 - 94230402 7739260 7739259 7739339 86491064 86491063 86491143 80 GAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAA ..:....::.x:..:..::..::.....:........:.....:-.x....:..:.:xxxx...:....:....:..... 44M1I35M 55/79 69.6% 80/94230402 0.0% 1/79 1.3% 94970031 NA +3224 chr4 + 190214555 102709292 102709291 102709409 118 AAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAA chr4 - 94230402 32638684 32638683 32638801 61591602 61591601 61591719 118 AAAGATGAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAATATaa ..:..x.:.::x:....::.xxxx..:.::...:...:....x:....:.xx.:x.:.x:..xx:.x:.::.:...x...x:....xxxx.......:.:.............x.x.. 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% 70070608 NA +3224 chr4 + 190214555 102709292 102709291 102709409 118 AAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAA chr4 - 94230402 32636721 32636720 32636838 61593565 61593564 61593682 118 AAAGATGAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAATATaa ..:..x.:.::x:....::.xxxx..:.::...:...:....x:....:.xx.:x.:.x:..xx:.x:.::.:...x...x:....xxxx.......:.:.............x.x.. 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% 70072571 NA +3095 chr4 + 190214555 102709295 102709294 102709363 69 GAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAA chr4 - 94230402 48273072 48273071 48273139 45957264 45957263 45957331 68 GAAGGAGAGAATGAAGGGGGTAAAGAAAAG-CAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA ......::...x.....::.x.........-x.:x..x..::x:...:.:.........:.:..:.... 30M1D38M 49/68 72.1% 68/94230402 0.0% 1/68 1.5% 54436223 NA +3914 chr4 + 190214555 102709310 102709309 102709427 118 GGAAGAAAAGAA-----AAGAAAAAGAAAGGAAGGAAGGA--AGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAGAAAGAG chr4 - 94230402 25255592 25255591 25255716 68974687 68974686 68974811 125 GGGGCAAAAGAAGCTGCAAAAATTAGAACAGATGGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAG ..::x.......-----..:..xx....x:..x..:.:..--:....:.x....x.x.x.......xx:..x::.......x.x...:...:...:.......:.:.xx:.....x:::...... 12M5I23M2I83M 81/118 68.6% 125/94230402 0.0% 7/118 5.9% 77453718 NA +3455 chr4 + 190214555 102709331 102709330 102709448 118 AAAGGAAGGAAGGAAGGAAGGAAGA-----AAAGA---------------AAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAGAAAGGAAGGAAGG chr4 - 94230402 81290005 81290004 81290140 12940263 12940262 12940398 136 AAAGGCAGAAAGAAAATTAGGAAGATTATTAAAGATGATAAGCTTAGAACAGAGACACAAAATGCACTTAAAGAGGAAG--AAGAAAGAAGAAAACGTATAGCAGAAAGAGAACGGGAGAGAGAGAAGTTGAGAGAGG .....x..:...:..:xx.......-----.....---------------.:...x.x.:..x.x.xxx..:..:...:--.........:....x.x.x::x..........x.:...........:xx:..::... 25M5I5M15I29M2D57M 83/116 71.6% 136/94230402 0.0% 22/116 19.0% 21419326 NA +3441 chr4 + 190214555 102709332 102709331 102709410 79 AAGGAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAG-GAAGGAAGGAA-----GAAAGAAAGAAAGAAAAAAAAGAAA chr4 - 94230402 7739261 7739260 7739345 86491058 86491057 86491142 85 AGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA .:....::.x:..:..::..::.....:........:.....:-.x....:..:.-----....:...:...:......xx.... 43M1I11M5I25M 58/79 73.4% 85/94230402 0.0% 6/79 7.6% 94970071 NA +3263 chr4 + 190214555 102709335 102709334 102709402 68 GAAGGAAGGAAGGAAGGAAGAAAAGAAAAGAAAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAA chr4 - 94230402 48273072 48273071 48273139 45957264 45957263 45957331 68 GAAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA ......::...x.....::.x.........x.:x::x.::.x..:.....:...:....::..:.... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 54436263 NA +3145 chr4 + 190214555 102709375 102709374 102709423 49 GAAGGAAGGAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAGAA chr4 - 94230402 42895011 42895010 42895059 51335344 51335343 51335392 49 GAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAA ...:..:.:.....:....:...:.:......x.....:....x..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 59814364 NA +3001 chr4 + 190214555 102716289 102716288 102716358 70 ACAAGAGTGAAACTCAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGAGGAAACATATTGAAAGA chr4 - 94230402 65532689 65532688 65532758 28697645 28697644 28697714 70 ACAGAGGTAAAAATTATTATCAAATGAGGAAAAAAAGAAAAAAAATAGAAAAAAAAAGAGCATTGAAAAA ...:::..:...x.:.x.x.....x:.::.......:........x....x:.::..:x::.......:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 37183600 NA +3221 chr4 + 190214555 102722029 102722028 102722090 62 CAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAAGAAAAGAGTAGAATGCTGGTTGCAAGGGG chr4 - 94230402 41191974 41191973 41192035 53038368 53038367 53038429 62 CAGGAGAAAAAAAAAAAAAAGAGAGAAGGAAAGCAAAGGGCTTGAATACTGTTTTTGAGGAG ..::.:..............:......:....:x...:.:x.x....:...x..x::...:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 61530055 NA +3027 chr4 + 190214555 102735493 102735492 102735557 65 AAATTTTTCTCTTACTAAGAGAAAATACCAAAAAAAAAAAAAAAAAGTTATAGAGGCTTAAATTA chr4 - 94230402 54791572 54791571 54791636 39438767 39438766 39438831 65 AAATTCTCCAAGTTTGAAGAAAAAGTACCAAAAAAAAAAAAAAAAATTGAAACAGGATTAGATCA .....:.:.xxx.x:x....:...:.....................x.x.x.x...x...:..:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 47943921 NA +3149 chr4 + 190214555 102737459 102737458 102737562 104 GTAAGGCCTGTGGTGTTTTTTTTGTTTGTTTGTTTTTTTTTTGAAA---TGGAGTCTCGCTCTGTCACCCAGACTGGAGTGCAGTGGCACGATCTCTGCTCACTGCA chr4 - 94230402 87609808 87609807 87609905 6620498 6620497 6620595 98 GTAGAGCCTGTGTTATATTTTTTGTTTGTTTGTTTTCTCCTTGAGACTTTAATGTCCCTTTCTG---------CAGAGGTTCTGCAGAACAATTTCATCTCCCAGCA ...::.......x.:.x...................:.::....:.---.::x...:.x:....---------.x.::..x.x.::.x..:..:..xx...x.x... 46M3I15M9D34M 66/95 69.5% 98/94230402 0.0% 12/95 12.6% 15127651 NA +3028 chr4 + 190214555 102758535 102758534 102758597 63 CTTCTTTACTTTTTTTCTTTTTTTTTTTTTTTTGAGAGAGGGTGTCACTCTGTTGCCCAGGTT chr4 - 94230402 35978802 35978801 35978864 58251539 58251538 58251601 63 CTATTGTACTTTTTTTTTTTTTTTTTTTCAGTTAAAAGAGGTTTCTACTCTGTTTTCTGGATT ..x:.x..........:...........:xx..:.:.....x.x::........x:.::.:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 66779733 NA +3128 chr4 + 190214555 102763831 102763830 102763917 87 TGTATATATATACATATACTGTATATATACATATATACATATACGTATATATATACATATACTGTATATATACATACATACATATAC chr4 - 94230402 67999855 67999854 67999937 26230466 26230465 26230548 83 TACAGATTTTTACTCATGCTCTGTATGTGGACACACACAT----GCATATATATTCATGCACTATATATATATATGCACACAGAAAC .::.x..x.x...x:..:..x.:...:.:x.:.:.:....----.:........x...::...:........:..:..:...x.x.. 40M4D43M 57/83 68.7% 83/94230402 0.0% 4/83 4.8% 34763976 NA +3208 chr4 + 190214555 102771563 102771562 102771638 76 TTAAAGCAGAAATAATGAAATTTTTCAAGGAAATCAGGGAGGAGGGGGTAAGAAAAAAATATGAATGCATTTATTA chr4 - 94230402 43261215 43261214 43261290 50969113 50969112 50969188 76 TCAGAGGAGAGAGATTAAGATTTTTTCATTAGAAGAAGGGAGAGAGGGGAAGGAAAAAATATATATGTATTTATTA .:.:..x...:.x.x.:.:......:x.xx.:.xx.:..::...:...x...:.........:x...:........ 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 59510348 NA +3826 chr4 + 190214555 102790707 102790706 102790798 92 TGGCATGATGTCGGCTGACTGCAACCTCTGCCTCCCAGGTTTAAGCAATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......x....:------..:..:..:xx:x..:.::....:...::x...x.xx..........::.:.........:......x...... 12M6D74M 62/86 72.1% 86/94230402 0.0% 6/86 7.0% 84593593 NA +3719 chr4 + 190214555 102815119 102815118 102815197 79 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCGAGTAACTGGAACTAGAGATGTGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACT--ACACGTGCACCAC ..:..:..:xx:x..:.............x...x.xx.x.........:.:....:........--.x.:....:.... 64M2D13M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 84617993 NA +3294 chr4 + 190214555 102820722 102820721 102820787 66 AAAACAAACAAAACAAACAAACAAACAAAAAAAACA-AAGATTAACAGCCAAACAGCTGCCCAGTAG chr4 - 94230402 81661611 81661610 81661675 12568728 12568727 12568792 65 AAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCCTTTC--CCAAAAAGCCGTTCAACAG ....x...............................-...x:.xx.--.....x...:.::..::.. 36M1I9M2D19M 53/64 82.8% 65/94230402 0.0% 3/64 4.7% 21159111 NA +3783 chr4 + 190214555 102847361 102847360 102847439 79 CTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGTGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.::........:.x...x..x.x........::.........:.:......--:....:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 84650235 NA +3652 chr4 + 190214555 102851758 102851757 102851815 58 CTGGGTTCAAGCAATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197142 18197141 18197199 76033204 76033203 76033261 58 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...........::x...x.xx.x........::...........:......x...... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 84654616 NA +3262 chr4 + 190214555 102853107 102853106 102853158 52 TCTGTCAAAATTACACACAAACACACACATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4202886 4202885 4202937 90027466 90027465 90027517 52 TCTCTCAGAATTACACAAACACATCCACATACTTTTTTTTTTTTTTTTTCTT ...x...:.........x.x...:x.....x:.................:.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 98650221 91564334 +3325 chr4 + 190214555 102863507 102863506 102863638 132 TCTTTTTTGAGACAGTCTCACTCTGTGACCC-AGGCTGGTTGCAGT----------GGTACAATCTCAGCTCAC----------------------TGCAACCTCCATCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCACCTGAGTAGCTGGGGTTACAGGT chr4 - 94230402 18197036 18197035 18197195 76033208 76033207 76033367 160 TCTCTCCTCAGACAGCCT-----TGTGACCCCAAGCTCTCTGCAGTCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT ...:.::.x......:..-----........-.:...xx:......----------..x:..:x..:..xx...----------------------.:..:..:xx.x..:.:...........x...x..x.x.......x::::.........:::....x.. 18M5D8M1I14M10I18M22I69M 90/127 70.9% 160/94230402 0.0% 38/127 29.9% 84666471 NA +3453 chr4 + 190214555 102882822 102882821 102882893 72 CTGCAACCCCTGCCTCCTGAATTCAAGCGATTCTCCTGCCTCAGCCTCCCAGGTAGCTGGAATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:...xx:x..:...::......:.x...x.xx.x........::..:..........:....x.:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 84685696 NA +3198 chr4 + 190214555 102922489 102922488 102922591 103 CAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCCAGCAGAAGGCAAAAAATAAGATCAGAGCAGAGCTGAAGGAGATACAGACACAAAAAAC chr4 - 94230402 37450528 37450527 37450630 56779773 56779772 56779875 103 CAAATAGAAGAACTAGAGATGTAGGGGTACATTTACTTTAAAGGACAAAGATAGTGAAGAAAAATACAAAATCAGAAATGAGAGAGACTCAAAGAAAAAAAAC ...x..:............x.:.:.:.:.x.:x:.:.:x....xxx:x...x:.::..:..x..x.:x.:.x....:x...::....:x..:.x.x....... 103M 64/103 62.1% 103/94230402 0.0% 0/103 0.0% 65471961 NA +3337 chr4 + 190214555 102931289 102931288 102931358 70 AGAGAGGGGGAAGGGAAGGGAAGGGGAAAGGAAAGGGAAAGGAAGAAGGGAAGAAGGGAAGGGAAGGGAA chr4 - 94230402 84397289 84397288 84397358 9833045 9833044 9833114 70 AGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGAATATGGTaaaaaaaaaaaa .....::..x.x.......::..::x........:...:.:......:....x.x..x..:::..:::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 18534000 NA +3196 chr4 + 190214555 102931315 102931314 102931353 39 AAAGGAAAGGGAAAGGAAGAAGGGAAGAAGGGAAGGGAA chr4 - 94230402 56911850 56911849 56911888 37318515 37318514 37318553 39 AGAAGAAAGGGAAAGAAAGAAGGAAAGAAGGGAAGGGAA .:.:...........:.......:............... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 46019465 NA +3030 chr4 + 190214555 102940716 102940715 102940791 76 TTACAAACTATGCATCCAACAAAGTACTAATATCCAGAATCTATAAGGAACTCAAAAACAGACATAGACCAGTGGA chr4 - 94230402 59741264 59741263 59741339 34489064 34489063 34489139 76 TTATACAGTATATAGGTCACAAAGTACTGATCTCCAGAAGCTACAGGGCACTGAGAAACAGCTAAAGAGCATTTGA ...:.x.x...::.xx:x..........:..x.......x...:.:..x...x.:......x:.x...x..x.x.. 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 43199452 NA +4415 chr4 + 190214555 102943444 102943443 102943551 108 AATGAATGCATACAGAAAATGTGGTGTATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACACACACACACACACACACCATCGACAGAATA chr4 - 94230402 14964793 14964792 14964897 79265506 79265505 79265610 105 AGTGCATTTATATAGAGG-TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACA--TGCACACACACACACTGTTGACTGAATA .:..x..x:...:...::-...x...x.:.:.x.::.:.:.::....::.:.:...........:...xx........--::.............::.:...x..... 18M1D59M2D28M 74/105 70.5% 105/94230402 0.0% 3/105 2.9% 87978651 NA +3082 chr4 + 190214555 102943465 102943464 102943522 58 TGGTGTATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACAC chr4 - 94230402 25393251 25393250 25393308 68837095 68837094 68837152 58 TGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ..:.:x.x..:.::.:..x.:.:.....:...x...:....:..........:..... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 77550214 NA +3262 chr4 + 190214555 102943467 102943466 102943544 78 GTGTATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACACACACACACACACACACCATCGA chr4 - 94230402 8395792 8395791 8395867 85834536 85834535 85834611 76 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACA--CACACACACAGACACAAATGA ......:.:.:.:..xx:....:.x..:..:......:x....:xx.:.......--..........x....x.x:.. 55M2D21M 55/76 72.4% 76/94230402 0.0% 2/76 2.6% 94547675 NA +3321 chr4 + 190214555 102943467 102943466 102943529 63 GTGTATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACACACACACA chr4 - 94230402 8395800 8395799 8395862 85834541 85834540 85834603 63 GTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...x.:.:....:..::.:.:...::x.::..xx...................x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 94547667 NA +3266 chr4 + 190214555 102943471 102943470 102943526 56 ATATATACGTATCTATGTGTATATATGTGTATGTATACACACACACACACACACAC chr4 - 94230402 25393253 25393252 25393308 68837095 68837094 68837150 56 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x.x.:..:.x:........:.....:.x...:.::............:..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 77550218 NA +3271 chr4 + 190214555 102955806 102955805 102955898 93 GAGAAACAACAAACAAAGTGGAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAAT---------GAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ........:.x..:---------.....x...:..............:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 14M9D70M 58/84 69.0% 84/94230402 0.0% 9/84 10.7% 66097513 NA +3194 chr4 + 190214555 102955818 102955817 102955878 61 ACAAAGTGGAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237700 9237699 9237760 84992643 84992642 84992703 61 ATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.x.....:...:.:.::x..x.:...:.....:....:....:..:...:....::... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 93718118 NA +3100 chr4 + 190214555 102959184 102959183 102959254 71 AAGCAGGTTGAATGTAAAAGGATAGGAGATTAGGAGACATACATATATATATACACACACACACACACACA chr4 - 94230402 70707569 70707568 70707639 23522764 23522763 23522834 71 AAGTGGGTTGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ...::.......x:x..x..:.x.:x..:xx.:.::.:...:....................::..x.x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 32251615 NA +3416 chr4 + 190214555 102961543 102961542 102961676 134 TCACTTATTT---GTTTATTTATTTATTTATTTGGCTCTTTTCTTGTATTTCCCTTTTCCTTTTCTTTCCTTTCTTTTTCCATTTCCTCCTCCCTTCCTTTGCTTA--CTTATTTTTTTCCCTTTAATTCCCATTCACT chr4 - 94230402 2456258 2456257 2456389 91774014 91774013 91774145 132 TCACTTATCTTCAGCACCTCTACTCATTTTTCTTACTCTTAAAATGTATTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGTTTTCTCCTCA--TTCTTTACTTGTCCTCATCTGTTCTCTTCT-----CCATTTGCT ........:.---.:x:x.:..:.:....x.:.x:.....xxxx.......:..:...::.:::..x.x:......:...x:...:......x--.:....:...:--..:..:.x..::.:.:.-----.....::.. 10M3I80M2D11M2I17M5D9M 84/127 66.1% 132/94230402 0.0% 12/127 9.4% 100505285 89709270 +3045 chr4 + 190214555 102974214 102974213 102974261 48 GCAACAGAGCAAGACTCTGTCTAAAATTGAAAAAAAAAAAAAAAAAAA chr4 - 94230402 40625725 40625724 40625772 53604631 53604630 53604678 48 GCTACAGAACAGAACTCAGTCCAAGGTTAAAAAAAAAAGAAAAAAAAA ..x.....:..::....x...:..::..:.........:......... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 62348489 NA +3187 chr4 + 190214555 102975541 102975540 102975603 63 CTATATCTATAATGATTATATATACATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681921 8681920 8681983 85548420 85548419 85548482 63 CCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .:..:...:xx..:.x........::...::.:.:.:...:.....x:.:............. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 94293620 NA +3040 chr4 + 190214555 102975557 102975556 102975608 52 TATATATACATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x....::...:..:.:..........x....:.x.........:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 10240205 NA +3254 chr4 + 190214555 102975558 102975557 102975609 52 ATATATACATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735402 1495001 1495000 1495052 52 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT ....x..:..:...:..:.:...............:.x.........:.x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 10240207 NA +3145 chr4 + 190214555 103005205 103005204 103005298 94 GCAATGATAACTATAAGCTCAAAGTAAAGGAATAGAGAAAA--------ATCTACCAAGCAAATTAAAAAAAAAAAAAAAACCAGAAAAAAGCAGGGGTTAC chr4 - 94230402 51060243 51060242 51060344 43170059 43170058 43170160 102 GCAAATAAAAATATCAACATCAAGGAAAAAAAAACAGAAAATTGGAAAAATGCACTAAGGAAATTAAAAAAAAGAAAAAAAGCTGAGAAAATTCTGTGTTAC ....xx.x..x...x.:.x:x...x...::..x.x......--------..x:..:...x.............:.......x.x..:....x:xx.x..... 41M8I53M 67/94 71.3% 102/94230402 0.0% 8/94 8.5% 51944962 NA +3064 chr4 + 190214555 103057244 103057243 103057316 73 GTATATATATATATATATATATATATATATACACACACACACACACATATATACACACACACACACACAAACA chr4 - 94230402 8395790 8395789 8395862 85834541 85834540 85834613 73 GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:...:.:.::...x.:..:...x..:.:.:::.::.x:...:xx...:...............x.x... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 94661454 NA +3161 chr4 + 190214555 103057244 103057243 103057322 79 GTATATATATATATATATATATATATATATACACACACACACACACATATATACACACACACACACACAAACACAAACA chr4 - 94230402 8395792 8395791 8395870 85834533 85834532 85834611 79 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:...:.:.::...x.:..:...x..:...:::.::.x:...:xx...:.:.............x...x.x.::..:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 94661452 NA +3935 chr4 + 190214555 103057245 103057244 103057347 103 TATATATATATATATATATATATATATATACACACACACACACACATATATACACACACACACACACAAACACAAACATATTTTGAGACAAGGTCTCATTCTG chr4 - 94230402 8395789 8395788 8395891 85834512 85834511 85834614 103 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTG .:.:.:...:.:.::...x.:..:...x....:.:::.::.x:....xx...................:.......::x..xxx:.:x.x.::::x....... 103M 66/103 64.1% 103/94230402 0.0% 0/103 0.0% 94661456 NA +3241 chr4 + 190214555 103057246 103057245 103057338 93 ATATATATATATATATATATATATATATACACACACACACACACATATATACACACACACACACACAAACACAAAC-ATATTTTG--AGACAAGGT chr4 - 94230402 8395808 8395807 8395902 85834501 85834500 85834595 95 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA-AAAAACCCAAACTACATTCTGGCAAATAAGGT .:..:...x..:....:...::x..:..xx.:.............:.:.x.....x.::x.:.-.x....x.....-.:...:..--.:.:..... 63M1D12M1I8M2I9M 66/92 71.7% 95/94230402 0.0% 4/92 4.3% 94661438 NA +3007 chr4 + 190214555 103057258 103057257 103057323 66 ATATATATATATATATACACACACACACACACATATATACACACACACACACACAAACACAAACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..:.:.....:..............x..x::x..x::::.:....x..:.x:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 36152411 NA +3364 chr4 + 190214555 103057375 103057374 103057452 78 ATCATG----ACAGCCTCGACCTCCTGGGTTCAGTCAATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197118 18197117 18197199 76033204 76033203 76033285 82 ATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......----......:x:.x..:.........:x::x.:.x.xx:x........::::.........:......x...... 6M4I72M 56/78 71.8% 82/94230402 0.0% 4/78 5.1% 84860257 NA +3859 chr4 + 190214555 103058473 103058472 103058555 83 CTACAGCCTCAACCTCCCAGGCTCAAGTGATCATCCTGCCTCAGCCTCTCATGTAGCTGGGACTACAGGTGTGTACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ........:x..x..:.::..:.......x.:xx.xx.x........:...x........:......--:...:.....::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 84861347 NA +3504 chr4 + 190214555 103112365 103112364 103112525 161 ATATACACATATATACATGTGCACGCACAAATATACACTTACATATATATGTATATACTTATATACTTATACATACATATACTTATATATACATATCTATACATATATACT--TATATATACTAAGT-ATACTTATGTATACATGTATATATACACATATACAT chr4 - 94230402 4417343 4417342 4417495 89812908 89812907 89813060 153 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-------CACAAACACTAACATATAAACTGAGCAATGCTT---CATGCCTGTGTACA-ACACACAGAAAT ..x..x...........::::...:..x:..:....:.x.:x:x:.x.::::..:..:.x.x::.:...x.:.....:...:....x....:::-------..:.x.:...--:.....x...:..:-..:...---:..:.x...:..:.-.....:.x.x.. 94M7D10M2I14M1I6M3D14M1D12M 97/150 64.7% 153/94230402 0.0% 14/150 9.3% 98695022 91519533 +3140 chr4 + 190214555 103112471 103112470 103112557 87 ATACTTATATATACTAAGTATACTTATGTATACATGTATATATACACATATACATATACATA----TATACACTTATAAGTATATATGTGT chr4 - 94230402 10913773 10913772 10913863 83316540 83316539 83316630 91 ATACACATATCTGTCCAGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCACTCCCAAGACTGCATGCAT ....x:....x.:::x..xx.x.........::....:..:...x.........:.:.....----:..x....:x:...xx.::...::. 62M4I25M 59/87 67.8% 91/94230402 0.0% 4/87 4.6% 92198698 NA +3013 chr4 + 190214555 103113236 103113235 103113315 80 ATATACTTATAAGTATATATAAGTGTATACATATATATGTATATATTAGAAAATCCTTCACAGCAGTTCTGTTTATTCTC chr4 - 94230402 39636794 39636793 39636873 54593530 54593529 54593609 80 ATATATTTGTATCTATATATAAATGTGTAAGTATATATTTGTGCATGAGACTGTCATATAGGACAGTCTGGTTCCTTCTC .....:..:..xx.........:...:..x:.......x.:.::..x...xx:..x.x:.x::....::x...:x..... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 63476442 NA +3092 chr4 + 190214555 103199373 103199372 103199413 41 TCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTAAAT chr4 - 94230402 45399591 45399590 45399631 48830772 48830771 48830812 41 TCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTAT ...............................::..:.:x.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 57799782 NA +3040 chr4 + 190214555 103267418 103267417 103267457 40 AAAACAAAACAAAACAAAAGAAAACAACAACAAAAAAATA chr4 - 94230402 55605344 55605343 55605383 38625020 38625019 38625059 40 AAAACAAAACAAAACAAAAAACACCAACAACAAAAAAACA ...................:.x.x..............:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 47662074 NA +3187 chr4 + 190214555 103335630 103335629 103335755 126 ATCTCACTGTATGCTCGCATGACCTTTT--------TTCTTTCTTTCTTTCTCTCTCTT------------------TCTTTCT-------CTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 9693677 9693676 9693835 84536568 84536567 84536726 159 ATTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ..:.:.x.x.x...::x.x.:.:..:..--------.:.:....x.:.x...:......------------------.:..x..-------:...::.....:..:..::.:.......:x:...:.x:...:x..x...:........::.:.::... 28M8I23M18I7M7I68M 83/126 65.9% 159/94230402 0.0% 33/126 26.2% 93641953 NA +3606 chr4 + 190214555 103335654 103335653 103335782 129 TTTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTT chr4 - 94230402 45185615 45185614 45185743 49044660 49044659 49044788 129 TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ....:.x:...x........:.:::..:x...:..x.::.:::...:...:.xx..:...::.:.:..x:.:xx.x:....:x..x::.x.......xx.:x:.::.xx.:::..x..::......... 129M 75/129 58.1% 129/94230402 0.0% 0/129 0.0% 58150039 NA +3142 chr4 + 190214555 103335707 103335706 103335840 134 TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTTCTTTTT chr4 - 94230402 28459063 28459062 28459195 65771208 65771207 65771340 133 TCATTTTTTTTTTACTGACTTTATT-ATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTT ..x...:...:..x..xx....x..-x..x......x.x:.:...x...x:.:...::...:..:::xx:x...x.:..:x::..xx:.:::..::.::..xx:..::x.x...:.:...:....x....:... 25M1D108M 78/133 58.6% 133/94230402 0.0% 1/133 0.8% 74876644 NA +4020 chr4 + 190214555 103335749 103335748 103335830 82 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCC----CTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTT chr4 - 94230402 11801288 11801287 11801373 82429030 82429029 82429115 86 CTTTCTCCCTATTGGTcttccctcccctcccctccccttccctTCTTTATTTTGCTCCCTCTTTCCTTCCTTCCCTCTTTCTTTTT ......::..x.:xx....:.:.:.::..:.:.:.::.::.....:..x:----.......:............:........... 50M4I32M 59/82 72.0% 86/94230402 0.0% 4/82 4.9% 91534461 NA +3005 chr4 + 190214555 103335763 103335762 103335841 79 TTCTTTCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCTTTCTTTTTTTTTCTTTTTC chr4 - 94230402 12140666 12140665 12140744 82089659 82089658 82089737 79 TTCATTTCCTCTTTCTGTTCATTTTTCCTTTCCACTCTCCTTTTGTACCACCTGCCTTCTGTCCTATCCTTACTATTTC ...x..:::.......x..:x...:.....:.:x.:....:.::x.x.:x...x......x..:.x.::..x..x.... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 91195097 NA +3229 chr4 + 190214555 103352023 103352022 103352069 47 TAATTTTATAATTTTTCTCATGTCTTTAAATTATTTTAAGAATGACT chr4 - 94230402 30318420 30318419 30318466 63911937 63911936 63911983 47 TAATTTTATAATTTTTCTCATGTGTTTAAATTATTTTGTGGTTTACT .......................x.............:x.:x.x... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 73033603 NA +3067 chr4 + 190214555 103370216 103370215 103370267 52 TGAATATCCATATCCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 29756192 29756191 29756243 64474160 64474159 64474211 52 TGAATTTTCATTTACATTATCTTTTTTTTTTTCTTCTTCTTTTTTTGTCTTT .....x.:...x.x....:.:...........:..:..:.......x.:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 73614024 NA +3091 chr4 + 190214555 103370228 103370227 103370300 73 TCCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGACGGAGTCTC chr4 - 94230402 74944682 74944681 74944754 19285649 19285648 19285721 73 TCCATTGTGTTGTGATTTTTGGTGGGTTTCTTTTTCTTTTTTTTTTCTTTTTCCCTCTGTAAGATTAAATATC ........x..x.xx.....xx.xxx...:.....:..........:.....:::.:...:...:x:.:.x.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 28425546 NA +3048 chr4 + 190214555 103373246 103373245 103373354 109 GGGGAGGAGGGGAGAGAGAGAGAGACAGAGAGAAAGAATTGTCTTTTCTCTTCCCTTTCTATTCTATTTGGGCCTCCAGTCGATTGGATGATGCTTACCCACATCCAGT chr4 - 94230402 91485748 91485747 91485856 2744547 2744546 2744655 109 GGGGAGGAAGAGAGAGAGAGAGAGATTGGAATGAAGAATTTTGTTCATCCTTTAAATCTCAACCTTTTTGTGGCTTCTATGCAGTAAATTTCACATACCCTCATTAAAT ........:.:..............:x.::.x:.......x.x..:x::...:xxx.:::.x:..x....x.x..:.x:.xx.x.::..xx::.x.....x...:x.:. 109M 66/109 60.6% 109/94230402 0.0% 0/109 0.0% 11887498 NA +3178 chr4 + 190214555 103375996 103375995 103376045 50 CCATCTCAAAAAACAAAACAAAACAACAACAACAAAAAATTTGAGTCAGT chr4 - 94230402 50017449 50017448 50017498 44212905 44212904 44212954 50 CCCCCTCCAAAGACAAAACAAAACAACAACAACAAAAAACCCAACCCAGT ..x:...x...:...........................::::.x:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 53358547 NA +3066 chr4 + 190214555 103376002 103376001 103376034 33 CAAAAAACAAAACAAAACAACAACAACAAAAAA chr4 - 94230402 80081939 80081938 80081971 14148432 14148431 14148464 33 CAAAAAACAAAACAAAACAACAACAACAAAAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 23294063 NA +3014 chr4 + 190214555 103411314 103411313 103411366 53 TGCGCGCGCGCGCGCGCACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.:..:.:..:.:.:::.:.:...xx........::............. 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 88446482 NA +3009 chr4 + 190214555 103423320 103423319 103423371 52 TGTGCCATTTTCTGTTTTTCTTTTTTTTTTTTTTTTTTTTGTCAACAAATAA chr4 - 94230402 50117648 50117647 50117699 44112704 44112703 44112755 52 TGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAGCAGATAA ....:xx.x....x.:.:...:...................x..:..:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 53305672 NA +3259 chr4 + 190214555 103428823 103428822 103428912 90 CCTGTGGGAATAAATATATATATATATATATTTTATTACGAACCTAAGGAAAATCTACTGCATTGTATTTACCTACAAAAATGAAAACAA chr4 - 94230402 91684070 91684069 91684152 2546251 2546250 2546333 83 CCTGGGGAAA-------ATACATATATCTATTTTATTGTGAACTGCAGGAAAATATACTACTGAGAATTCACTGTGAGAAATGAAAAAAA ....x..:..-------...:......x.........::....:xx........x....:.xxx.x...:..:xxx.:.........x.. 10M7D73M 61/83 73.5% 83/94230402 0.0% 7/83 8.4% 11744753 NA +3112 chr4 + 190214555 103480852 103480851 103480898 47 ATATCTATCTATCTATATATACATATATATACATATATACATATATA chr4 - 94230402 25493135 25493134 25493181 68737222 68737221 68737268 47 ATATTTATTTACCCATACATACATATATGTACATATACAGGTATATA ....:...:..:.:...:..........:........:.x:...... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 77987717 NA +3012 chr4 + 190214555 103480894 103480893 103480987 94 ATATATACACATATATACATATATATACTATATATATATACACACACACATTATATATATATATATATATATAATGTGTGTGTGTATATATATA chr4 - 94230402 9539758 9539757 9539851 84690552 84690551 84690645 94 ACAGATAGACAAATATACATACATATATAATATATTTATATGTGCACAAGGAAGAGGCTCATTTAGAAGCCTAATGTTGGTCTGCACATATATA .:.x...x...x.........:.....:x......x....::::....x:xx.x.x::x:..x..x.x::x......xx..x..:.:....... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 93941136 NA +3257 chr4 + 190214555 103480921 103480920 103480970 50 CTATATATATATACACACACACATTATATATATATATATATATATAATGT chr4 - 94230402 71295526 71295525 71295575 22934828 22934827 22934877 50 CTCTCTCTATATGCACACACACACTATATATATATGTATGTATATAGTAT ..x.x.x.....:..........:...........:...:......:.:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 32185395 NA +3078 chr4 + 190214555 103512201 103512200 103512257 57 ACGTTTTTAGCGCTATGGTTTTCCTCTTAACACTGCTTTAACAGTGTCCCAGAAATT chr4 - 94230402 32282858 32282857 32282914 61947489 61947488 61947545 57 ATGTTCTTATCTCTAGAGTTTCCATTTTAATACTGCTTTGACTGTATGCCAGAAATT .:...:...x.x...x:....:.x.:....:........:..x..:.x......... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 71229343 NA +3304 chr4 + 190214555 103522805 103522804 103522873 69 GAGACTCCGTCTCAAAAAAACACAAAAAACAAACAAACAAACAAAAAACCATATAGGAGTATAATATTT chr4 - 94230402 51198554 51198553 51198621 43031782 43031781 43031849 68 GAGAGTCC-TCCAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGGAAACCTTACATCT ....x...-..:x........xx......:.....................:.x:.:.::x.x.:..:. 8M1D60M 52/68 76.5% 68/94230402 0.0% 1/68 1.5% 52324251 NA +3034 chr4 + 190214555 103522818 103522817 103522852 35 AAAAAAACACAAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 59709224 59709223 59709258 34521145 34521144 34521179 35 AAAAAAACCCAAAAAACAAACAAACAAACAAAAAA ........x.......................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 43813594 NA +3800 chr4 + 190214555 103523572 103523571 103523837 266 CTTTCTTTTCTTC-------TTTCTTTCTCTTTCTTTCTTTTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTCTATCTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTATTTCTCTCTCTCTTTCTTTTTTCT------CCTTCCTTCCTTCCCTCCTTCCTTCCTCTTTCTTTCTTTCTCCTTCCTTCCTTCCTTCCTTCCT------TCCCTCCCTTCCTTCCT---GTTGGTCTTGCTTT--GCTTGTTTTTTTCTCTCTCTCTTTTTCTTTCTTTTT chr4 - 94230402 52740977 52740976 52741259 41489144 41489143 41489426 283 CCTCCTCCTCTTCCCTGCAATTTCACCCCCTTTCATCCGTGTTTCTTTTTACCTCCCCAGCCCTTCCCTTCCTACTAGGTTTCCATATGTCCCTATTTTGTATCTT-GCTCCTTCCCGTGTCTC-----CTGTCATTTTTCTAAGGCGTTTGGCTTCCCTGCCTCCTTCTTTCCCAGAGGTGCTTTTCTTCTCAATCCCCTCCTGTAACTCTTGACAGTCCATCCAATCCTTCCCCGGGCACTTCATGCCCTGAGCTCATTTGTCT-TCTCATTCCTCTCCTCCCTCTCT .:.:..::.....-------....x::.:.....x.:.x.x.:.:.:...x:...:.:xx::...:.:...::xx.xxx:....x.x:x.....x:..:x.x:...-x........::.x....-----..x..x.......------::.xx.....:.x........:....:xxxxx.x::.....:..:xx.:..:....x:xx::..------...x...xx.......:---.:xxx..x...::.--...::...x.:.-....x:..:.:.:..::..:.:. 13M7I86M1D17M5D13M6I64M6I17M3I14M2I12M1D23M 158/259 61.0% 283/94230402 0.0% 31/259 12.0% 50782595 NA +3328 chr4 + 190214555 103523649 103523648 103523753 105 TTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTATTTCTCTCTCTCTTTCTTTTTTCTCCTTCCTTCCTTCCCTCCTTC----CTTCCTCTTTCTTTCTTTCTCCTTCC chr4 - 94230402 60913297 60913296 60913405 33316998 33316997 33317106 109 TTTATTACTTGTTTCCTGTTTTCTTTGCTTCTAATTTCTCTATATCCTTTTGTATTATTTTTCTATCCACACCTACATTGATAATTCCTCTTTCTTTCATCCTACTTCC ..:x..x.:.x:.....x::...::.x....:x........x.x..:..:.x.x..x.::...:x...x:x...x.x.:----x..............x.:..x..... 79M4I26M 70/105 66.7% 109/94230402 0.0% 4/105 3.8% 42610352 NA +3005 chr4 + 190214555 103523807 103523806 103523855 49 TTTTTTTCTCTCTCTCTTTTTCTTTCTTTTTAAATAGACATGATAATGG chr4 - 94230402 39479572 39479571 39479620 54750783 54750782 54750831 49 TCTTTCTCTCTCTCTCTTTTTTTTTTTTTTCATATGGATGAAATAATGG .:...:...............:...:....:.x..:..::x:....... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 64044235 NA +3505 chr4 + 190214555 103577176 103577175 103577321 146 TTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTT chr4 - 94230402 45185616 45185615 45185741 49044662 49044661 49044787 126 TTTCTGCTTCATTCTTTCT---------------------TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCT .....x:...x........---------------------........-...:.:x.:..::..........xx:....:.:.....:x...xx.x:....:x..x::.x......:xx..x:..:.xx.:....x:..:..:.::. 19M21D8M1I98M 84/125 67.2% 126/94230402 0.0% 22/125 17.6% 58391560 NA +4810 chr4 + 190214555 103577180 103577179 103577422 243 TCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTATCTTCTTTTTGGAGTTTCACTCT chr4 - 94230402 78381042 78381041 78381275 15849128 15849127 15849361 234 TTTTTCTTCCTTCGAAGCTTTTTCTTCTTTCTTGGCCTTCT--CCTTCTCTTTGTCAGACTTCGGTGTTTTCTCCTTAATCTCTCTTGGTTTATCATCTTTGTTTGC---CCGTTCTTCCTTTGGTT---TATCTTTCCCATCCTTCCCAAGTGCCTTCGTCTCTGGAGTGGTAGCTGGAATCTtttctttcttt-tctttatctttttccttcccgcttttttctttatcatctttctcttt .:......:...:xxxx..:......::..::.xx.:....--.:....:.:.x..xxx...:xx.x:.....:::.xx...:....xx.:.x..x.::..x:..x.---..x.:........xx..---.x..:.....x........xxx.x.....x.::..xxxx.xx.xx..xxxx..:...........-.:.:.x........:...::x..x.:......x.x:xx....x..:. 41M2D64M3D17M3D65M1D47M 148/234 63.2% 234/94230402 0.0% 9/234 3.8% 25196138 NA +3161 chr4 + 190214555 103577181 103577180 103577288 108 CTTTCTTTCTTTCTTTCTCTTTCTT----------TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 23468156 23468155 23468273 70762130 70762129 70762247 118 CCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT .:..:...:...:....::......----------.:x.:....xx...x..:..::.:.x.....xxxx.:::.x.:x......x:......x....::...x..x:..:..::.:. 25M10I83M 69/108 63.9% 118/94230402 0.0% 10/108 9.3% 80109025 NA +4479 chr4 + 190214555 103577205 103577204 103577352 148 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCT----------TTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 45185583 45185582 45185739 49044664 49044663 49044820 157 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x................x....::x:.....-..........xx:..:.:.......----------....:x..x...x:...:..xx..x..:::xx..::.:x...:..:.. 74M1D25M10I48M 97/147 66.0% 157/94230402 0.0% 11/147 7.5% 58391622 NA +3013 chr4 + 190214555 103577235 103577234 103577315 81 CTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCT chr4 - 94230402 8141240 8141239 8141320 86089083 86089082 86089163 81 CCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .:...:x:....x:.x::.:::......x:.:x...:::..x.....:...:...::.:...x.x:..:..:.:....... 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 95435995 NA +3164 chr4 + 190214555 103577237 103577236 103577342 106 TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTTCTTTCTTTCTCCTTCCCTTCCTTCCCTCCTTCCTTCCTTC chr4 - 94230402 83048900 83048899 83048998 11181405 11181404 11181503 99 TTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCC-------CTCTCTCCATCCCCTTCAGCGCTTCTCCATCCATCC ..:x..:.........x..........::....::.x.x..::::x::...x...x.x.x...-------..:.....x....:.:.xx.x..:..:.x.:.x.:. 63M7D36M 65/99 65.7% 99/94230402 0.0% 7/99 7.1% 20528337 NA +18334 chr4 + 190214555 103589670 103589669 103590004 335 CAGGAAATGGAATTAAGAATATTCATCCACAGAGGTATAGGGTGAGCTTATGAAACTTGAAGTGGCGGAGGCAGATTTGGAATTCCTGCGAGAGCAGCCATTGAAACTTGGGTCTCTTGGCGTTGCTCTTTTCTTCCGACTGGACCTGGTGGTGTCTGCATCGTTGGGGTCAAACACGACTGTCATG---GACTCCATTCTGGTCACGGTGTACATACTGCTTTGCCGGTTTGGATGAAACCTGGTGGTCTTGAGCTCTAGCTCATCATAGCTGGAAACTTTGATGAAAGGACACCAGCGAAATGCTCTCTTGAAGCCAGCTCGAAATCTGAGGAAAA chr4 - 94230402 53631990 53631989 53632325 40598078 40598077 40598413 336 CAAGAAATG--CTTAGGAATAATCATCTCCCGCTGTGTTCAGTGAACTGACGAAACTTGAGGCTGTGGAGACAGCCTTGGAATTCCTCTGTGAACAGCCATTGAAACTTGCATTCCTTGGAGCTGCTTTTTTCTTGCGACTGGGATGGGAATTGTCTCCATCGTTGGTGTCGAGCACTACTGTTGTGCTGGACTCCATTCTGGACACAGCATATAGACTGCTTTGCCGAGTGGGATGAAACCTGGCAGCCTTGAGCTCTAGTTCATCATGACTGGACAGCTCAATGAAGGGGCACCAGCGGAAAGCTCTCTTGAAGCCAGCTCGGAACCTGGGAAGAA ..:......--x...:.....x.....:x.x.xx..:.xx:....:..x.:.........:.:x.:....:...x:...........x:.x..:................x:.::.....x.:....:.......x.......:x:x..x:x.....x.........x...:.:...x.....::..---.............x...:.::..:.x............:x.x.............::.:............:.......::.....x.x:.::.....:..:........:..x....................:..:...:.:.:.. 9M2D176M3I148M 255/333 76.6% 336/94230402 0.0% 5/333 1.5% 49957680 NA +14325 chr4 + 190214555 103591460 103591459 103591718 259 ACTTGCATTTCG-TAGTTTTGT-------TTTTACCTTTTATTCAGACAGCAGTAGATGATGGGATTGTACATGGTTGAGCTCATTGCCAGCCAAAAGCTAGCCAGGTAGACCTGCTGGATGTATTTCCATCTATTTAGTTGTTGATAGATTGCAGTGAGAATGAAGTAAATATGATAGGGCAGCCAGCAGATAGCAAATGTCATGACAACAATAATCATCATTTTGACAACCT-----ATAAAGAAAAAAAGTCATTTTTGACAAATATAA chr4 - 94230402 53635156 53635155 53635427 40594976 40594975 40595247 272 ACATACATTTCGACTGTTTTGTAACTGGTTCTTACCTCCTATTAAGGCAGCAGTAGATAATGGGATTGTACATGGTAGAACTCATGGCAAGCCAAAAACTGGCCAAATAGATTTGCTGAATGTATTTCCACCGGTTTAATTGTTGATAGATCCCAGTAACTATGAAGTAAGTGTGGTAGGGCAGCCAACAGATGGCAAATGTCATCACAACCACAATCATCATTTTTACCACCTGAAGGAAAGAGATAAGAATTCtattttattatagataa ..x.:.......-:x.......-------.:......::....x..:...........:.................x..:.....x..x........:..:....::....::.....:...........:.x:....:............:x....:.xx.........:.:..:...........:.....:...........x.....x.:............x..x....-----.x.:...x..:..x..xx....:x:.x.x.... 12M1I9M7I205M5I33M 207/259 79.9% 272/94230402 0.0% 13/259 5.0% 49956304 NA +3113 chr4 + 190214555 103602076 103602075 103602146 71 TGTTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCTCTTCTCCCTTCATTTCATTCATTTCATCTTCCAT chr4 - 94230402 30474712 30474711 30474782 63755621 63755620 63755691 71 TGTTCTAGTCTTGCTCCCCTTCCTTCTCACAACTTTTCCATTCCATTCATTTCATTCATTTCCTCTAGCAT .....xxx....x:.x::...::.....xx.....:..:x:...x.................x...xx... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 73127364 NA +3537 chr4 + 190214555 103615348 103615347 103615419 72 CTCTTCCTTTTACCATATTTCCTGCTATCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982286 18982285 18982354 75248049 75248048 75248117 69 ctttttttttctctctctctctctctctc---tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..:..::...:x.:x.x.:..::x..x..---..................x.................::.. 29M3D40M 53/69 76.8% 69/94230402 0.0% 3/69 4.3% 84633062 NA +3139 chr4 + 190214555 103615349 103615348 103615421 73 TCTTCCTTTTACCATATTTCCTGCTATCG-TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982277 18982276 18982350 75248053 75248052 75248126 74 tctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ....:....:x::x.x....::x..x..x-.x.x.x.x..............x.x................... 29M1I44M 55/73 75.3% 74/94230402 0.0% 1/73 1.4% 84633072 NA +3641 chr4 + 190214555 103615349 103615348 103615452 104 TCTTCCTTTTACCATATTTCCTGCTATCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAATGGGTTTGTTTTGGGA chr4 - 94230402 18982281 18982280 18982368 75248035 75248034 75248122 88 tctttctttttttttctctctctctctc-tctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA---------------GGATTTATTTTGTGA ....:.....x::x.x.:..::x..x..-.x.x.x................x...................::.---------------..:...:.....x.. 28M1D45M15D15M 68/88 77.3% 88/94230402 0.0% 16/88 18.2% 84633068 NA +3870 chr4 + 190214555 103615349 103615348 103615421 73 TCTTCCTTTTACCATATTTCCTGCTATCGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982285 18982284 18982354 75248049 75248048 75248118 70 tctttttttttctctctctctctctctc---tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....::....x.:x.x.:..::x..x..---.x....................................::.. 28M3D42M 56/70 80.0% 70/94230402 0.0% 3/70 4.3% 84633064 NA +3102 chr4 + 190214555 103615380 103615379 103615415 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 21986316 NA +3316 chr4 + 190214555 103615382 103615381 103615417 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 21986318 NA +3102 chr4 + 190214555 103615384 103615383 103615419 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 21986320 NA +3474 chr4 + 190214555 103629801 103629800 103629901 101 ATATGGAACCAAAAAAGAGCCCACATTGCCAAGACAATCCTAAGCAAAACAAAAAA------AAAACAAAAAAAAAACAAAAAAAACAACAACAACAACAAAAAAAA chr4 - 94230402 4027155 4027154 4027261 90203142 90203141 90203248 107 ATAGGAAGCTATAACAATGACAAAATTCCCTCTACTGTACTATGTGAAGCTGATAATGTCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA ...x.:.:.:.x..x.:x.x.x.x...x..xxx..x:.x...x.::..:.x:.x..------..x............x...xx........................ 56M6I45M 72/101 71.3% 107/94230402 0.0% 6/101 5.9% 99602646 90611909 +3253 chr4 + 190214555 103629838 103629837 103629894 57 TCCTAAGCAAAACAAAAAAAAAACAAAAAAAAAACAAAAAAAACAACAACAACAACA chr4 - 94230402 34399253 34399252 34399309 59831094 59831093 59831150 57 TCCTATGCAAGATAAAAAAAAAAAAAAAAAGAAACACACAAAACCACACAAACCACA .....x....:.:..........x......:.....x.x.....x...xx...x... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 69230585 NA +3003 chr4 + 190214555 103629852 103629851 103629906 55 AAAAAAAAACAAAAAAAAAACAAAAAAAACAACAACAACAACAAAAAAAAACAAA chr4 - 94230402 38842326 38842325 38842380 55388023 55388022 55388077 55 AAAACAAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACAGACAAACAAA ....x...............xx:..:x.:.....:......x.x.:.x....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 64787526 NA +3055 chr4 + 190214555 103629863 103629862 103629907 45 AAAAAAAAACAAAAAAAACAACAACAACAACAAAAAAAAACAAAG chr4 - 94230402 18021892 18021891 18021936 76208467 76208466 76208511 45 AAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGG .....::..xx...x...........................::. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 85607971 NA +3134 chr4 + 190214555 103629867 103629866 103629910 44 AAAAACAAAAAAAACAACAACAACAACAAAAAAAAACAAAGCTG chr4 - 94230402 14290079 14290078 14290122 79940281 79940280 79940324 44 AAAAAACAAACAAATAACAACAACAACAAAAAAAACCAAAGCTG .....xx...x...:....................x........ 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 89339788 NA +4327 chr4 + 190214555 103650708 103650707 103650855 148 TAAATATATATAAATAAATATATATTATATCATATATAATATATATATTATATATGATGTATATAATATATATTATAT--ATGATATATATATTTTATATATAATAATATATTATATAATAATATATATATCTTATATATAATAATATAT chr4 - 94230402 67910062 67910061 67910199 26320204 26320203 26320341 138 TACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTG---------ATTAAATATCAACATTTGAA---TACATATAAGAAAATAT ..x.....:.xx.x....x.....:...xxx...:......x.......:.....::.:..........:..x.....--...xx.x...x....x.xx.:---------....x...x:..:..x.:x.---..:......x..x.... 78M2I21M9D20M3D17M 100/136 73.5% 138/94230402 0.0% 14/136 10.3% 35740646 NA +3201 chr4 + 190214555 103650725 103650724 103650806 82 ATATATATTATATCATATATA-------ATATATATATTATATATGATGTATATAATATATATTATATATGATATATATATTTTATATA chr4 - 94230402 67910063 67910062 67910151 26320252 26320251 26320340 89 ACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATA .:.....:x...::.x.x...-------.x...:...x..x....:x........:.......x....:.::......:..x.x.x... 21M7I61M 60/82 73.2% 89/94230402 0.0% 7/82 8.5% 35740662 NA +10125 chr4 + 190214555 103656182 103656181 103656354 173 ATGGACCAGTACCTTTCTTTTGGCCTTTAGCTGCTCATGATACTTGTCACAGGTATCTCCTGGGATTTCTCCTCCCCAGAGAGTAATTCCAACAATGGTGTATGTAATACCCATGATGAGCAATGGGAAACAGTACACCAGTATAATGACGATAATATGGTAACT---ATGAAAAA chr4 - 94230402 53648494 53648493 53648669 40581734 40581733 40581909 176 ATGGAACAGTACCTTTCTCTTAGCTTTGAGCTGCTCGTGATATTTGTCCGATGTGTCACCTGGTATTTCTCCTCCCCAGAGGGTAATTCCCACTACAGAATAAGTGATGCCCATGACAAGCAGTGGAAAACAGTAGACCAGCACAATCACAATGACATGATACCTGCAATGAAAAA .....x............:..:..:..x........:.....:.....xx.x..:..x.....x.................:........x..x.::.x:..x..:..:.......::....:...:........x.....:.:...x..:..:.:...:..x..---........ 165M3I8M 137/173 79.2% 176/94230402 0.0% 3/173 1.7% 50007688 NA +12380 chr4 + 190214555 103658210 103658209 103658423 214 CTTACGTGAAATGTTGTTTGGGACCTTCTGGCCATTGCACAAAGCAGAGAGTACGGCCTGGCATGACTTTGGTTTTGGAATAAAGACACTGAGGGAAGGCAAGTAGAAATGCTAGAATCCAAATACTTCCAATGACAATCTTGGTTGCTGTAGCAGACAGTCTGGGTTTCAAGGGATCAATAATAGCCATATACCTATATAAAAACAAACAAAA chr4 - 94230402 53649999 53649998 53650210 40580193 40580192 40580404 212 CTTACGTAAAATGCTGTTTTGGACCTCCTGGCCATGCTACATAGCAAAGAGTTCTCCCAGGCATCACCTTGGTTATAGAGTAGAGGCACTGGGGAAAGGCCAACAGGAAAGCCAAAATCCATATGCTCCCAATGACCACCTTGGTAGCAGTTGCAGAGAGCCTGGGTTTCAAGGGATCAATAATGGCCATGTACCTGCATAAGA--AAGCAAAA .......:.....:.....x......:........xx:...x....:.....x.xx..x.....x..:......x.:..:..:..:.....:..:.....x.::..:..x..:.:......x..:..:........x.:......x..x..x.....x..:.......................:.....:.....::....:.--..:..... 204M2D8M 167/212 78.8% 212/94230402 0.0% 2/212 0.9% 50008211 NA +3330 chr4 + 190214555 103680461 103680460 103680521 61 ATTAAGTGATATATATATATATATATACATACATACACACACACACACACACATATATATA chr4 - 94230402 28470357 28470356 28470417 65759986 65759985 65760046 61 ATTAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA .......::..:....:....:.:.x....::..:........:...:..x..:.x..x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 75210104 NA +3214 chr4 + 190214555 103680473 103680472 103680559 87 ATATATATATATATACATACATACACACACACACACACACATATATATATACACATATATATACATATATATACACATATATATATC chr4 - 94230402 4417343 4417342 4417429 89812974 89812973 89813060 87 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATC ..x..x.:.........:...:.....x:x...:..:..::x:x:.x.::...::...xx.x:...x..x...:...:....x.... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 99263130 90951425 +3102 chr4 + 190214555 103680479 103680478 103680544 66 ATATATATACATACATACACACACACACACACACATATATATATACACATATATATACATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...:....:.....:...........:..x..x:.x:.x:::....:.xx....:::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 36775632 NA +3284 chr4 + 190214555 103680483 103680482 103680547 65 ATATACATACATACACACACACACACACACATATATATATACACATATATATACATATATATACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA .....::...:..........:.........:....x..x::x..x:.:......xx:...::.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 36775636 NA +3157 chr4 + 190214555 103683471 103683470 103683558 88 AAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAGACAAAAATAAGCAAAATCTTAAAAAATAAGTGATACTACT--ACAGAGAAACA chr4 - 94230402 64448693 64448692 64448782 29781621 29781620 29781710 90 AAAAAAAAAAAGAAAAAAGCAATAAAAGAGAGCGATGGTGAGATTATGTGAAACGCCAATAAACAAGTGGGAGAAGTTAGCAGGGAAACA ...........:......:x..x..:......x..x.:::.:.x..x.::...:x::..x...:.....:x.xx.x.--:...:...... 77M2I11M 60/88 68.2% 90/94230402 0.0% 2/88 2.3% 39234778 NA +24714 chr4 + 190214555 103719003 103719002 103719475 473 AAAATTCTTAGTCTCTTTACTTTTATAGACCCCGTTACGTTACTATTTCCTTTGTAATCTTATCCCACCGCCCAGTTCTTTTCTT--TCCCTTCTCCCT---CTTTCCTCTCTGTCTGTCCTCTCCTCACCTGTCCACCGCAATGGCCGTCATGGAGTAGATGCTGGCGAACACAGCTGTGATAGGAAAGAAGTTCTGGAAGCGGCAGTAGTTGGCGCCAAAGTACCACTCGCTATGAAGCGCGTAGATGAAATTGACCAACGTGTTGAAGGCGGCCATGGAGGCGTCGGAGAAAGCCAGGTTCACAAGGAAGTAGTTGGTGACAGTCCTCATGCGCTTGTGGGCCAGGATGATCCAGATGACGATGAGATTTCCCAAAACTGCCACTGCCACCACCACACCATACGCCAGGGACCAGAGCGCGATGCGCCAGGACGGCTGCACGAACTGGTTGGTGAGGTTGGCC----CAGGGCTGGGAG chr4 - 94230402 53664841 53664840 53665300 40565103 40565102 40565562 460 AGGACTCTGCCTCTCATCACTTTAATGG---------------TGTTTTGTTTGGATATTTATTTCAGCGGTGAAGTCTGATCTAAATCGCTCACCCCTGTGCTTTTATCTCT-------CTTTTCTCACCTGTCCACAGCAATCGCTGTCATGGAGTAGATGCTGGCGAAGACAGCTGTGATGGGGAAGAAGTTGTGGAAACGGCAGTAAGCCTCTCCAAAATACCACTCGCTGTGCAGTGCATAGATGAAGTTGATGAGGGTATTGAAAGCAGCCATGGAGGCATCAGAGAAGGCCAAGTTCACCAGGAAGTAATTGGTCACGGTCCTCATGCGCTTATGAGCCAGGATGATCCAGATGACAATGAGATTTCCAAAAATAGCCACTGCCACCACACCGCCATATGCCAGAGACCACAAGGCGATGCGCCAGGAGGGCTGCACAAACTGGTTGGAGAAGTTGGCTGCAACAGGGGTAGAAG .::.:...xxx....x.:.....x..:.---------------.:...:x....x.xx:....::..x..x:x.:x...xx...x--..x..:x:....---....:x.....-------..:.:.............x.....x..:.......................x...........:..:........x.....:........:x:xx.x.....:...........:..x..:..:........:....:x.:x..:.....:..:...........:..:.....:....:......x........:.....x..:..............:..:....................:...........x....:x..............xx.:.....:.....:.....x.:x..............x........:..........x..:......:----.....x.:.:.. 28M15D42M2I12M3I11M7D346M4I12M 358/451 79.4% 460/94230402 0.0% 31/451 6.9% 50054162 NA +3086 chr4 + 190214555 103724043 103724042 103724111 69 AAAAAAAAAAAAAAAAAAGAAATGGTAACAATGGACACCTTTACCTTGTTTCCAATCTTAGTGGGAAAG chr4 - 94230402 50283490 50283489 50283558 43946845 43946844 43946913 69 AAAAAAAAAAAAAAAAAAGAAACAACAATAATGGAACCACTGATCTTGCATTTACTTCCAATTGGGAAG ......................::::..:......xx.x:.x.:....:x.::.x.:::.:.x..:... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 53440553 NA +3236 chr4 + 190214555 103746448 103746447 103746510 63 AGATTTAAAGATACTAA-----TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 - 94230402 54543418 54543417 54543485 39686918 39686917 39686985 68 AAGTTTAAAATGACTAAAAAAGCCATTTTCTCATTCTATTTTTTTTCTTTTTTGTGTGTGTGTGTGTG .::......:xx.....-----:.x....:.:x..:.x........:..................... 17M5I46M 50/63 79.4% 68/94230402 0.0% 5/63 7.9% 49203030 NA +3094 chr4 + 190214555 103746462 103746461 103746506 45 TAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTG chr4 - 94230402 38302497 38302496 38302541 55927862 55927861 55927906 45 TGGTCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTG .::............x.x............x.x............ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 65443965 NA +3069 chr4 + 190214555 103746465 103746464 103746515 51 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAA chr4 - 94230402 23804586 23804585 23804636 70425767 70425766 70425817 51 TCTAATTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTGCAA ...xx..........:.........x.x.x..:.........::....:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 79941879 NA +3171 chr4 + 190214555 103746465 103746464 103746512 48 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG chr4 - 94230402 38302494 38302493 38302541 55927862 55927861 55927909 48 TTTTGGTCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTG .:..xx.:..........x.x..........x................ 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 65443971 NA +3004 chr4 + 190214555 103746467 103746466 103746514 48 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 19559268 19559267 19559315 74671088 74671087 74671135 48 TTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATA .....xx........xx:.x.......................:.:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 84187199 NA +3106 chr4 + 190214555 103746467 103746466 103746521 55 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAAAGCTCT chr4 - 94230402 38302494 38302493 38302548 55927855 55927854 55927909 55 TTTTGGTCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTGAGATTTT ....xx.:..........x.x........x.x...............:.:::.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 65443973 NA +3148 chr4 + 190214555 103746467 103746466 103746508 42 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTG chr4 - 94230402 38302500 38302499 38302541 55927862 55927861 55927903 42 TCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTG .:..........x.x............x.............. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 65443967 NA +3362 chr4 + 190214555 103746469 103746468 103746510 42 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 - 94230402 38302500 38302499 38302541 55927862 55927861 55927903 42 TCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTG .:..........x.x........................... 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 65443969 NA +3011 chr4 + 190214555 103746472 103746471 103746518 47 TTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAAAGC chr4 - 94230402 23804591 23804590 23804637 70425766 70425765 70425812 47 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTGCAAC ..........:.........x.x....:.........::...:x.:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 79941881 NA +3204 chr4 + 190214555 103746476 103746475 103746512 37 TTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG chr4 - 94230402 54511330 54511329 54511366 39719037 39719036 39719073 37 TTTTTTCTTTTTTTTTTTTTGTGTGTGCGTGTGTGTG ......:....................:......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 49235146 NA +3264 chr4 + 190214555 103746476 103746475 103746514 39 TTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 23804591 23804590 23804629 70425774 70425773 70425812 39 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCA ..........:................:.........:. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 79941885 NA +3073 chr4 + 190214555 103746482 103746481 103746522 41 TTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAAAGCTCTG chr4 - 94230402 64253797 64253796 64253837 29976566 29976565 29976606 41 TTCTTTTTTTTTTTGTGTGTGTGTGTGTGTGTAATGATGTG ..:...............................x.x.x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 39492685 NA +3008 chr4 + 190214555 103837727 103837726 103837768 42 TCTCAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAACAAAAC chr4 - 94230402 22746113 22746112 22746154 71484249 71484248 71484290 42 TCTCAAAAAAAAAAAAAAAAAGAACAACAAAAACAACCAGAC .....................:.....x.....x...x.:.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 81091614 NA +3181 chr4 + 190214555 103838924 103838923 103838975 52 TCCCTCCCCCAGTTCCTTATAGGCTGAGTATTATGGGGTCACAATCTTCCTG chr4 - 94230402 70187955 70187954 70188006 24042397 24042396 24042448 52 TTTCTTCCCTGGTTCCTCATTGGCTGAGTACTTTAGGTTCACAATCTTCCCG .::..:...::......:..x.........:.x.:..x............:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 33650969 NA +3004 chr4 + 190214555 103879233 103879232 103879282 50 CTTAAAGTACAATTAAAAAAAAAAAAGAAAGAAATGTGAACCTATATAAT chr4 - 94230402 86381797 86381796 86381846 7848557 7848556 7848606 50 CCCAAAGGAAGGTTAAAAAAAAAAAAAAAAGAAATGAAAACCTGTGTAAT .::....x.x::..............:.........x:.....:.:.... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 17497436 NA +3246 chr4 + 190214555 103915418 103915417 103915500 83 TCTAGTGGACAGAAGACAGTAAAAACAAACAAAAAACAAAACCAAACCAAACAAAACTAAAACAAAACAAAACAAAACTACAG chr4 - 94230402 27961279 27961278 27961360 66269043 66269042 66269124 82 TTTGATGCACAGCAG-CTGCAAAAACAAACAAACAAAAACCCCAAACCCAACAAAACAACAACAAACAAACAGATAACGATAG .:.::..x....x..-.x.:.............x..x..xx.......x........x.x......xx..x.x.x...x.:.. 15M1D67M 61/82 74.4% 82/94230402 0.0% 1/82 1.2% 75954139 NA +3027 chr4 + 190214555 103921674 103921673 103921725 52 TCTACCCATCCTCTTTTTTTTTTTTTTTTTTTTTTGCTGGAATATTTAAAAC chr4 - 94230402 63982212 63982211 63982263 30248140 30248139 30248191 52 TCTGCCTTTCAGCTTTTTTTTTTTTTTTTTTCTCTCCTGGAAAACTTGAAAC ...:..:x..xx...................:.:.x......x.:..:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 39939462 NA +3032 chr4 + 190214555 103947749 103947748 103947787 39 AGTTTTTGGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTT chr4 - 94230402 21022186 21022185 21022224 73208179 73208178 73208217 39 AGCTCATAGTTTTTTTGTTTTGTTTTGTTTGTTTGTTTT ..:.:x.:............................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 82925563 NA +3044 chr4 + 190214555 103949447 103949446 103949506 60 AAACATTCTTGCTAAAAATAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 52363158 52363157 52363217 41867186 41867185 41867245 60 AAATTTTCAGGTTAAAAATAGTTGTTTGTTTTGTTTGTTGTTTTTTTGTTTTATTTTTTT ...:x...xx.:........:x.....x....x...x..x.......x....x....... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 51586289 NA +3247 chr4 + 190214555 103992659 103992658 103992724 66 TGGTATATTGTTTTCCTTTTTTATTTGTTTCAATAAATTTTTCAATTTTCTTATTAATTTCTTCAT chr4 - 94230402 28018602 28018601 28018667 66211736 66211735 66211801 66 TGGCATATTATTTTCCTTCTTTATTTATTTCAGTAATCAAATCAATCTTACTACTGTTTTACTCAT ...:.....:........:.......:.....:...x:xxx.....:..x:..:.:x...x:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 75974057 NA +3370 chr4 + 190214555 103997394 103997393 103997531 138 CATCATGGGTCTACTACAGAAATCATATATATA--------AATTGAAAATATATTT----CTTTCTTTTCTTCTTCCCTTCCTCCTCCCTCCCTTCCTTCTTCATCCCCCATCCCTTCCCCACCATCCTTTTTTTTTGCTTTTGTCTTC chr4 - 94230402 25050874 25050873 25051015 69179388 69179387 69179529 142 CGTTATGTGTGCACTACAGAAATCAGTTAAAAAGGAAAGAAAAAAAAAAAAGCATCTGGAACTGGATTTTGATTTGCCTTGACACCACCCTACCTCCA--------CCTCCTCTCCTTCCCCACCATCCTTTTTTTCTTCCCTTTTCTTC .:.:...x..x:.............xx..x.x.--------..xx:....x::..:.----..xxx....xx.:.x..:.xx.x..x....x...:.x--------..:..x::......................:.x.::..x..... 33M8I16M4I37M8D44M 90/130 69.2% 142/94230402 0.0% 20/130 15.4% 78946520 NA +3095 chr4 + 190214555 103997688 103997687 103997748 61 ATATATATATATATATACACACACATATATATATACACACACATACATGGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398863 60831540 60831539 60831600 61 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGA .....x..:...x..x.x:::::.:.:.:.:........:.:.....::............ 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 70598885 NA +3009 chr4 + 190214555 103997692 103997691 103997732 41 ATATATATATATACACACACATATATATATACACACACATA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x..............:......:......x.....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 58726004 NA +6174 chr4 + 190214555 104024968 104024967 104025133 166 CTCTGTCACCTCTGAGAATAGAATTTATTTTGGATTCTTGTATTACCTGCCTCTGGTAGTTGGACACTTGTTTGCTAACTGACTGAC--------TTATTTTAACTTAAATATGATATAATTGTCCTTTATT--GCAGGTTTGACTTTAGTAC-TTTTCAAATCATGACTAAATTGA chr4 - 94230402 53771379 53771378 53771549 40458854 40458853 40459024 171 CTATGCATCCTCTGAGAATAAAATTAATTTTGAATTCTCGTATCATCTGCT-----TGCTTGTGCACTTATTTGCTAACTGTCTGACGGAGTGAGCTATTCTGGGTC-AGTATGATTTAGGCATCCTTTATTACACAGTTTCCAATTCAGTACATTTTTTAATCAAGTCTAAATTGA ..x..:xx............:....x......:.....:....:.:....:-----.:x...x:.....:...........x.....--------:....:.::x.:-.:......x..:x::.........--:...x..:x.x..:.....-....:x.....x.x......... 51M5D31M8I12M1D24M2I19M1I23M 121/160 75.6% 171/94230402 0.0% 17/160 10.6% 50253589 NA +3362 chr4 + 190214555 104048418 104048417 104048484 67 CTCCAATATTTAAAAATTGGAGAGAGAGAGAGAGAGAAAGAGAGAGAAGAAACTATCACAGAAACTA chr4 - 94230402 69270196 69270195 69270262 24960141 24960140 24960207 67 CCTCAAAATATATATTTTGGAGAGAGAGAGAGAGAGAAGGAAGAAAAAAAAATTGTTTCAGAAGTTA .::...x..x..x.xx......................:..:::.:..:...:.:.:x.....::.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 34778222 NA +3250 chr4 + 190214555 104058181 104058180 104058259 79 TGAAATAGATGACCAAAATAAATAAATAAATAACAGCGACAATAATAAAAATAAATCGGGAGGAGAAGAACGAGAAAGA chr4 - 94230402 94076852 94076851 94076930 153473 153472 153551 79 TAAAAAGGCTGGTCAAAAAAAAAAAATAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGA .:...x:.x..::.....x...x......x.x..........:..:..x..:...xx:::..::::...:x....:... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 9981329 NA +3599 chr4 + 190214555 104075499 104075498 104075584 86 AACATATATATT---ATTGTATAATATGTATACCATATATATATATATATATATATATATATATATATATATATATACCATATAAACAA chr4 - 94230402 16373829 16373828 16373917 77856486 77856485 77856574 89 AATATATATATTTAAAATGTCCTACAAGTAGGCCATATTTATATAGATACACAAATATTTATAGACATTTATGTATGTTATACAAACAA ..:.........---.x...x:x.:.x...x:......x......x...:.:.x....x....x.:..x...:...:::...:...... 12M3I74M 63/86 73.3% 89/94230402 0.0% 3/86 3.5% 87701670 NA +3485 chr4 + 190214555 104079071 104079070 104079160 90 CGATAATCCCATGAATTCCATGCTATTATTAT----TCTCCTTTACAAATGAGAAAACTGAGGCACAATAAAGCTAAGTAACTTGTCCAAAGTC chr4 - 94230402 10729171 10729170 10729262 83501141 83501140 83501232 92 CAATACCCCTGTGAGGT--AGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:...x:..::...:x.--.x.:x....:...----..:x:......::..:...............xxx.:.:.......:...:...:.... 17M2D13M4I58M 63/88 71.6% 92/94230402 0.0% 6/88 6.8% 93349900 NA +3183 chr4 + 190214555 104085198 104085197 104085325 128 AAGAAGAAGAGGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGGA------GAAGGAGAAGGAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAGAGAAGAAGAAGA-----GGAAGAAGAAGAAGAAGAG chr4 - 94230402 29062369 29062368 29062507 65167896 65167895 65168034 139 AAAAAAATGTGCAGGTGGAAGAAAGAGCAGGAACAGAGGCAGAAATATCTGCAAGGGAACCAGCAATAAAAAGAACCAGAGAAGAAGAAGCAGAAGAGATAAGAAGAGATTGATAGTTCTGGGATAAGAGGAGAGAGGG ..:..:.x.x.x.:.x.......:::.x..:.:x...:.x..:.------.x.:.:...xx..x.:x.:..::.:xx.............x......::x....::...xx:.x.-----..:.x....:..:::..:. 44M6I65M5I19M 80/128 62.5% 139/94230402 0.0% 11/128 8.6% 75022829 NA +3597 chr4 + 190214555 104085205 104085204 104085373 169 AGAGGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAG--AAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 21758891 21758890 21759061 72471342 72471341 72471512 171 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA .:....:xx:...:::....:..x.:::.....::.:.:.xxxx..x..x...x.x:x:..x..:x.x..:..x.x.x.:x::x.:.....x:x::xx....::..:.....:.::..:....:.....x:..x.....:--x.......:.xxx:x....::..:..x.. 140M2I29M 97/169 57.4% 171/94230402 0.0% 2/169 1.2% 82326314 NA +3064 chr4 + 190214555 104085242 104085241 104085329 88 GAAGGAGAAGGAGAAGGAGAAGAAGAAAGAGAAGAAGAAGGAGAAGAAGAAAG--------AGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAG chr4 - 94230402 35568970 35568969 35569063 58661340 58661339 58661433 94 GACGGGGATGGAGACTGA--AGCTGCAAGAGACAAAGCCATGGAAGAGGAAAGCACTGAACAGAAGAAAGAGAGGGAGAAGAAGAAGAGGTCGAGG ..x..:..x.....xx..--..xx.x......x:...xx:x:.....:.....--------.......::.....:............:.xx..:. 18M2D33M8I35M 63/86 73.3% 94/94230402 0.0% 10/86 11.6% 68516272 NA +3380 chr4 + 190214555 104085290 104085289 104085455 166 GAAAGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGAAGAAAGAGAAGAAAGAGAAGAAGAAG chr4 - 94230402 18962234 18962233 18962399 75268004 75268003 75268169 166 GAAGGTAAAAAAGGGATGCGATATTGAGAAGG-GATGTTGAAGAATTAAATGAATAACTAAAAAGAGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAAG ...:.x:..:...:::x.x:.x.xx:.....:-..x.xx......xx.:.x...x..-x..:....:..x....x::.x...x..xx:.:.:..:.:.xx::..x..:.::..........:x.:.:....x.:xx..x:.x.....::..:x..:.x..::.x... 32M1D24M1I109M 98/165 59.4% 166/94230402 0.0% 2/165 1.2% 85123056 NA +3347 chr4 + 190214555 104085311 104085310 104085476 166 GAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAGAGAAGAAGAAGAAAGAGAAGAAAGAGAAGAAGAAGGAGAAGAAAGAGAAGAAGAAG chr4 - 94230402 18962234 18962233 18962399 75268004 75268003 75268169 166 GAAGGTAAAAAAGGGATGCGATATTGAGAAGG-GATGTTGAAGAATTAAATGAATAACTAAAAAGAGGATGAAGTGAATGAATAATTGGGAAAAAAGGCTAGAGCAAAAAGAGAATAAGAAACAAAGGAAACAACTGACAATGAAAGGAAAATAAAATAAAGACAAG ....:x:..:...:.:x:x:.x.xx:.....:-..x.xx......xx.:.x...x..-x..:....:..x....x::.x...x..xx:.:.:..x.:.xx:...x.:........x.....:x..::...:x..xx..x:.x...:.::..:x..:.x..::.x... 32M1D24M1I109M 99/165 60.0% 166/94230402 0.0% 2/165 1.2% 85123077 NA +3055 chr4 + 190214555 104085374 104085373 104085420 47 GAAGAAGAAGAAGAAGAAGAAAGAGAAGAATAAGAAGGAGAAGAAAG chr4 - 94230402 25798635 25798634 25798681 68431722 68431721 68431768 47 GAAAAAAAAAAAAAAAAAGGAGGAGAATAATAAAAAGGAGGAGAAAG ...:..:..:..:..:...:.:.....x.....:......:...... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 78286739 NA +3056 chr4 + 190214555 104085447 104085446 104085504 58 AAGAAGAAGGAGAAGAAAGAGAAGAAGAAGAGGAAAGAAGAAAGAAGAAGAAGACGAA chr4 - 94230402 56566208 56566207 56566265 37664138 37664137 37664195 58 AAGAAAAGATAGAAGAAAGCAAAGAAGAAGAGGAAAGAAGGCTCAAAGGGGAGACTAA .....:.::x.........x:...................:xxx..:::.:....x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 47519239 NA +10631 chr4 + 190214555 104116740 104116739 104117062 323 TTAAAAATGAAAGTGGAATTTCACTTTAATACACAGCAAGACTTTACCAGCTGGCTGCAGTACATATACTTGGCT-GCTAGTTGCTTAGTTTATTAGATATTTTATAGTCCGGGAAACTAAAGATTATGGAGCCAGTTCCCACATGCTGCATCAACAGGAATTGGGAGTCAGACAAGCTAGAGATATATGA---AGAAGTGAATAAG-CCAGTACACTAAGGATAAAATGAATTAATCTGAAGCTATTAAAGAAGCTTTGTCAGGTACTTAGTATGCTCATGTTTTAATTCCTTATGCCTATTCTCCTTGGT-TGCAATTCTCTTTCAA chr4 - 94230402 53788903 53788902 53789225 40441178 40441177 40441500 323 TCAATAATGAAACTAAAAACGCAGCTTAATAGGCAGCAAAGCTACAGCAGCTGGTGGAGCCGCACAGATCCGGCCCTCTTGCTGCTGAGTTTATTGGACATTTTATAGTCCTGGGAACTAAAGATAATGCATCTCGGTCCCATATGCTGCATCAACACGAGCTGGGACTCCGTCATGCCATTGATCTATGAGGCAGCAGTGAATAAGACCCAGACACAAACACTAAAATGAATCAATCCTAAGCTGTTAAAGAGACACCACGAAGCACTT------TCCAGTTTTCTGTTCTTGCTTTCTAATCTCCATCTTGTGAAATACGCTCCCAA .:..x.......x.::..x:x..x:......x:......::..x:.x.......:x.x:x::..:.x.:::...:-x..x.:....x........:..:............x..:..........x...x.x.:x.x.....:..............x..::.....x..x.x..x..:.xx...x.....---..x..........-..x:x....x..x:x..........:....:x.....:.......::.x::::x.:.:....------::..xx...:x:...:.xx.x:...x.....x.xx.-..x...x.x..::... 75M1I115M3I13M1I62M6D36M1I16M 218/317 68.8% 323/94230402 0.0% 12/317 3.8% 50327837 NA +3138 chr4 + 190214555 104121810 104121809 104121862 53 TTGAAATGTGGTATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 21908457 21908456 21908509 72321894 72321893 72321946 53 TTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACA ..:......:.xx:.x........:....:...............:xx..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 82213353 NA +3139 chr4 + 190214555 104121820 104121819 104121892 73 GTATATATATATATATATATACACACACACACACACACACACACGCACACACGCACACACACACAATGGAATA chr4 - 94230402 8395798 8395797 8395870 85834533 85834532 85834605 73 GTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.::...x.:..:...x....:.:::.::.x:...:xx.:..:.......:......x......xx..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 95726022 NA +3149 chr4 + 190214555 104143360 104143359 104143459 100 TTTGTTGTTTCTATTTACACCTTTTCTTTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCTCTC chr4 - 94230402 83048900 83048899 83048997 11181406 11181405 11181503 98 TTTATTTTTTCT--TTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTCAGCGCTTCTCCATCCATC ...:..x.....--..x:.:...........:::.:.:x.x:.:..:x....:x...x.x.x......:....x....:::.xx.x:.:..:.x..:x.. 12M2D86M 63/98 64.3% 98/94230402 0.0% 2/98 2.0% 21094460 NA +3215 chr4 + 190214555 104143394 104143393 104143492 99 TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTT--TCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .......:.:--...:.:::.::...:.x......x.x:::.x:.:.xx.:..xxx:.:..x.:...:...............x.xx..:::....... 10M2D87M 62/97 63.9% 97/94230402 0.0% 2/97 2.1% 61061466 NA +3010 chr4 + 190214555 104148881 104148880 104148951 71 AAAGATAATTTTCTTTCTGTTTTTTATATTTTATTAAATATATAAATAAATTCTCAATTTTCTTT---ATTGTA chr4 - 94230402 57955885 57955884 57955958 36274445 36274444 36274518 74 AAAGGTGATTTTCTTTCTTTCTTTTATTTTTAATCAATTAAATATATGTACACTTTATTTTCCCTGTGATTGTA ....:.:...........x.:......x...x..:..x..x...x..:x.:x..:x......::.---...... 65M3I6M 53/71 74.6% 74/94230402 0.0% 3/71 4.2% 46192996 NA +3468 chr4 + 190214555 104234842 104234841 104234949 108 CTGTAGCATCACATTT----CAAAAAAGACATAGACATAATAGAGAGAGTTCAGAGGAGAGCCACAAAGATGATAAAGGGCTTAGGAAATAAGACCTATGTGGAAAGGTTAA chr4 - 94230402 93383088 93383087 93383199 847204 847203 847315 112 CTGCAATATTGCATTCGGGGCTGGAATGATGCTGATGGATTGGAGAGAGTTCAGAGGAGAGCCGGGAATGTAATCAAGGAGCTGGAGGGCATGATTTATATGGCAAGTTTAA ...:.::..::....:----.x::..x..:::x..::x.x.:.....................:x:..x:.:..x....:x:.:.:::::.x..::...:...x...x.... 16M4I92M 67/108 62.0% 112/94230402 0.0% 4/108 3.7% 10851754 NA +8392 chr4 + 190214555 104236050 104236049 104236351 302 CTTTCCAGTTTACCTTTAAGAAAAAAAACACACTGCCGTTTTCTTCCCCTGAGGAGGCTGTGTTATTACTACCGTC-----CACAT-ATCAGGGTTACAGCACTTGCAGTAGTAGATCATCCCTGTGCTGTCATGGTGATGATATATGATGGAAAAAGCCATCCATCTGAAAATCCAAGGCACAAA-GGCTGAAGCAATAATGAGGTAGCCCAGCACAAACCCGGCATGCACAGCACTCGGCATTTCCC--CCCAAATAAAAGTGGACTACCCT-GTAAATTGAAAATCTTTAG------ATAGGAAAACTCTCAAAG chr4 - 94230402 53799768 53799767 53800080 40430323 40430322 40430635 313 CCTTTCTCTTCACCTTTAAAAAAAGCCCTGCGCAGCATTGCTCTCCCAGGAATAGGCCCACATTATTACTGCAGCCACAGCCACATCATCAGAGCTACAGTGCTCGGAGTTGTAGATCATCAGCCTGCTGTCACGGCCGTGATGTATGATGGAAAAAGCCATCCATCTGAAAGCATGCAGCACAAAGGGCTGGGGCTGGAGCCATGCAGTGTGG--CGGGGCCAACGTACACAGCACCGAGCACCTTCCAACCCAAACAAG---GCACAAATTTGGTAAACTGAGGTTCATTAGGAGGAAAGGGGAACACTTTCAAAG .:..:.xx..:........:....:xxx::.:.x..xx.x:...:..xxx:.x::.x.::::........:.x.:.-----.....-.....:.:.....::..:.x...x..........xx:x........:..:x:....:............................::x::x:.......-.....::..x:x.::x.x.:..:x::.--.:::x..::.:.:........:x:...::.:..--......:..:---.x..x.x::.-.....:...::x..x....------.x:....x...:...... 76M5I5M1I99M1I27M2D33M2I10M3D10M1I19M6I18M 196/297 66.0% 313/94230402 0.0% 21/297 7.1% 50436282 NA +3143 chr4 + 190214555 104239457 104239456 104239492 36 AAACAAACAAACAAACAAAAAACAACAACAAAAAAC chr4 - 94230402 21619681 21619680 21619716 72610687 72610686 72610722 36 AAACAAACAAACAAACAAAAACCAACAACAAAAAAC .....................x.............. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 82619776 NA +5771 chr4 + 190214555 104239911 104239910 104240030 120 TGGGTTAG----TTTTATGCTTTTTTCCCTGTAACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982248 18982247 18982353 75248050 75248049 75248155 106 TGGGATAGGATtttcttttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGT------------------GAGAGAGAGAGAGAGAGAGGAA ....x...----..:.x.x........::.x.xx......:.:.:.:.....................................------------------...................::. 8M4I72M18D22M 87/102 85.3% 106/94230402 0.0% 22/102 21.6% 85257663 NA +3548 chr4 + 190214555 104239927 104239926 104240004 78 TTTTTTCCCTGTAACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 18982260 18982259 18982331 75248072 75248071 75248143 72 ttcttttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGT------ ..:...:.:.x.xx......:...:...:.:.:.:.............x.x.x.x.................------ 72M6D 56/72 77.8% 72/94230402 0.0% 6/72 8.3% 85257667 NA +3488 chr4 + 190214555 104239927 104239926 104240006 80 TTTTTTCCCTGTAACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 18982260 18982259 18982331 75248072 75248071 75248143 72 ttcttttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGT-------- ..:...:.:.x.xx......:...:...:.:.:.:.............x.x.x.x.................-------- 72M8D 56/72 77.8% 72/94230402 0.0% 8/72 11.1% 85257667 NA +4468 chr4 + 190214555 104239941 104239940 104240029 89 CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982262 18982261 18982350 75248053 75248052 75248141 89 cttttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG ....:::.:.:...:...:...:...:.:.:.:.x.x.x.x.x.x.x.x.x.x................x................... 89M 66/89 74.2% 89/94230402 0.0% 0/89 0.0% 85257679 NA +3170 chr4 + 190214555 104239990 104239989 104240036 47 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGATGCAGT chr4 - 94230402 81629064 81629063 81629110 12601293 12601292 12601339 47 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGT ..........:.......x.................x.xxx.:.... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 22610926 NA +3316 chr4 + 190214555 104239992 104239991 104240027 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 22610928 NA +3102 chr4 + 190214555 104239994 104239993 104240029 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 22610930 NA +3489 chr4 + 190214555 104269748 104269747 104269942 195 TTCCTTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTGAGACGGAGTTCCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCAAGATCGCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTAT chr4 - 94230402 12140666 12140665 12140837 82089566 82089565 82089737 172 TTCATTTCCT---CTTTCTGTTCATTTTTCCTTTCCACTCTCCTTTTGTACCACCTGCCTTCTGTCCTATCCTTACTATTTCTCTACATGCTTTGCCCAACA-GAAGCTTTAATCTTTTTCATCAA--TAGATCGCCAT-----------------CTGCTAACTCTGCTTCATTGGCTTTCATGTTTCTATTGT ...x......---.....:x...x............x:.:......:x.x::x...x:.:.:.x....x.....x.:x..:..:.x.x.x.:..x..::.x.-.:..:.::.x:...x..xx:..:--.:..x:..x..-----------------....x.x......:..x:x..:.:xx:..x....x:.:. 10M3D89M1D23M2D11M17D39M 110/172 64.0% 172/94230402 0.0% 23/172 13.4% 92129082 NA +3533 chr4 + 190214555 104269749 104269748 104269816 68 TCCTTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTTTCCTTTTTCCTT chr4 - 94230402 9693768 9693767 9693835 84536568 84536567 84536635 68 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .:...:.::.:.......:..::..:...x:.....x...::x..x:.....:......:...:.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 94575981 NA +3448 chr4 + 190214555 104275043 104275042 104275103 61 TTCTAAACTGAAAATTGTCATAAAAAATAAAATAAAACAACAACAACAACAAAATTTGGTT chr4 - 94230402 30591923 30591922 30591983 63638420 63638419 63638480 61 TTCTTAAATGACATTTGAGATTAAAAATAGAACAAAACAACAACAACAAAAAAACTTGATT ....x..x...x.x...xx..x.......:..:................x....:...:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 73683120 NA +6331 chr4 + 190214555 104285227 104285226 104285628 402 CCTGCGGGGTTCAGGCTGAAAACATAT--TGCCTAGTTGCTATGAAATACTTCTTTGTAATGA------ATTGATTCTTCTTTCAAAGAGTATCTGGAAATTCTAAATGGAATTCAAATTAATTTCTCTTTTTTTCTAATGTGACT----CTCATTATTTAACTTGTCTCTAGCCACTCTTTTTTGAATGCCCACTTTTCTTAATTTAGTATATGATATGCAACAATTTAATATGTAATATACATTTTGAAGATTTAAAAATGTGAAATAA---TTTATTAGGGTTCCACATACTGTCA-TAGTATACAAAAATTTTAATTTTA-ATAAGATGTCAT-AATGCTGATTCTGAAACTGTGATATGTGCTATAAT-GGAGAAATGTTTGTCATTTGTCTTAATGACACTTTTGTACATTTAGA chr4 - 94230402 53804356 53804355 53804737 40425666 40425665 40426047 382 CCCATGAGGTGCAGGCTGGAGAAGTGCCCTGCTCAGGTCCTCTGTGACGTGCCTACTCGGTGACACAGCACTGATGCCTCACTCAGAGTGCTTCC--AAACCCCAGGTGGGTGCTGACCTAATTT-TCTTCCCTCCCTCTCTGCCCACAGCTCTTTATATCCCTTGTTCCT------TCTTT----------CCCTTTTGTTAATTTATTATACGAGG-GCAGCAGCACA-----------------CGACAGATTAAAATCATGAAAGCAAGGCTCATTAGGATTCTATGTCCTTTGAGTGGCACGTAAAA--TAAAATTCTGTGTGAAATGTCATGAAAGTAGATTTTGAAGTTTTGACAGATGTGAGAAAAGGAGAAATGTTTGCCATTTGTCTTAATGACACTTTAGTACATTTGGA ..:::.:...x.......:.:.x:.::--...::..x.x..x..x:.:::x:..x:x:::...------.:....x.:..x:...:..x.:x..:--...::.:.::...:xx:::.x:......-....:::.:.:xx.x..x.:----...x....x.xx.....::..------.....----------.x.....x........x....:..x:-...:..::x:.-----------------:..x::x......x::.....xx.---:.:......:...:.::.x..x.x.-.:.:.:::....--.xx....:.:-:.:.:.......-..x.:x....:....::.x...:.x:..:x.x..x-.............:.....................x........:.. 27M2I34M6I26M2D28M1D20M4I21M6D5M10D26M1D11M17D24M3I25M1I12M2D10M1I12M1I35M1I47M 236/363 65.0% 382/94230402 0.0% 58/363 16.0% 50480871 NA +3926 chr4 + 190214555 104347668 104347667 104347768 101 ACACACAAA-TATTATATATTTAAAA-TAATA--TATAATTATGTA---TCATATGTAA-AAGACAAATATGTGTGTATGTGTGTGTGTATATATATATACATATATGT chr4 - 94230402 40224607 40224606 40224715 54005688 54005687 54005796 109 ACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT .........-..x:.:..:.x....:-.....--....xx......---.:x.:..:..-.:....:..x.x.....:.......:..........x........:... 9M1I16M1I5M2I12M3I10M1I49M 81/101 80.2% 109/94230402 0.0% 8/101 7.9% 64123061 NA +3007 chr4 + 190214555 104347725 104347724 104347765 41 AAATATGTGTGTATGTGTGTGTGTATATATATATACATATA chr4 - 94230402 89821279 89821278 89821319 4409084 4409083 4409124 41 AAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTA ....:.......x.x....................:..:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 14526446 NA +3024 chr4 + 190214555 104347734 104347733 104347778 45 TGTATGTGTGTGTGTATATATATATACATATATGTAATTCTTCTA chr4 - 94230402 19559296 19559295 19559340 74671063 74671062 74671107 45 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTA ...:......................:...:.xx.....:..x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 84788438 NA +28146 chr4 + 190214555 104394423 104394422 104395295 873 AGTATTTAAATCACGCGTGGATCTTAGAGACAGAGAGAGACATCTACTGGTCCATTTACTACCAATCCCAAGCGCCTCCCCCTCCACTGTAATTAATGTAACGTTTTCTCTCTTTACAGCTGACAGCCAAGAGCATAATTAGAGTCTAATAAAACACAGAAAAGTCACAAATGCAAAGTGGAATAAACAGTAAACAGTGAGGGAAGAGAAGATCCCGGA--------GTGTGATGGCTGGGTAATGTCTTAGATAAACTGTGTGCACATTGACACTGTCACGCTCTCGGCAGCCCCAAGTGTGCTGGTAGC--CTGGTGCAGACAGACAGCTCGAATTAATCCCAAGAGAAGCGCATGACAGGCGAGTGAAGCAGACAATTAGAATGAAGGAGGAAATTGGAAATGGCAAAGGTGTGAACATATGTCAAATTACAACTAAATGATAAATTACAATTCTGTCATTGGAATAAGCGGTAATTAAGAAAGATTTCAGCTATCCTTCTTG----------AAAAAAAATAAGAGAGAA------------------------------------------CCACGTTTTTCCCCTCAGTTTAGAT--------------TTGTTTGCTGAATTGTTTCCATCCATCTCACAC-ATGGTGCTGTATCTTCCTGACTTTGGAGCTGCATTATTTGTGTACATTAAGGATAATTCTTTTCTTTCCTCTTCTCCATTTTCCAGACTGGCAG-AATAATAGTGTTAAAATGAAGAGGAAGCTGATAGTATCTGATATAAAAACCTGCAATGA-GATTTAAAAAAAAAATAAAAAAAGAGAGGTTTGCTGCTGAAGCT--GCTGCGGCACTCTAATTATTTTAAACAAGCACTGCACAGTCCAGCTGACAATTAGGAAAGCCTGCTCTATGGCTTGGGGGAGTCATATGAAACCTCATAATCAC chr4 - 94230402 53815095 53815094 53815995 40414408 40414407 40415308 901 AGCATTTCGATGCGGCACGCGTCGCAGAAGCAGAGCGAGACG--------------------CGTCTCCCCGCTCGTTCCTCCCCGCGGTAATTAGCGCGAGGGTTCCTCTCCCCGCAGCTGACAGTCGGCGGCGTAATTAGGGCCTAATAAAGCCCCTCGAAGTCACAGAGGCGACGCGGGACAAACA---AGCGGCGAGGGGGGTCGCGGCGCGGTACGGCGGGTGCGTGACGGCCGGGTGACGCGGCGGCTGAGCGGTGTGCGCAGTGACACTGTCACGCTCCCGGCAGCCCCGGGTG-----GCAGCAGCGGGCGCAGACAGACAGCTCGAATTAATCCCAGGAGGCGCGCGTGACAGGCGAGCCAGGCAGACAATTAGGAGGAGGGAGGAAATTGGAAATGGCAAAGGTGTGAACATATGTCAAATTACAACTAAATGATAAATTACAATTCTGTCATTGGAATAAGCGGTAATTAAGAAAGATTTCAGCTATCCCTCTCGGAGGGGAAGAAAAAGGAGGAAGAGGGAAAAGCAGATTTTTCTTCCTCTCCCCTCCTTTCTTTCCCCCCCCCCTTTTTTTTTCCTTTAATTTTAATAATATAGCCGGGGAGCGCCGGCTGTATTGTTTCCATCCATCTCGCGCTCCGGGGCTGCTTCCTCCCACCTTCCTGAC------ATTTGTGTCC-----TGAAATCTCATACCCTGCCTCCCCGCCCCATCCC---CCCGCAGCAGCGATGCTGTCAGCCGGGAGCCGACGC-----------GGCGACAAAACCCGCGCGGACGCGTTAACACCCAGCCCACCGCACCGCATCCCCCCGCTCCGTTTAAGCCGCCGCACTCTAATTATTTTAAACAAGCCCAGCACGGCGCAGCTGACAATTAGGAATCCCCGCTTCCCGGCTCGGGGGATCGGCGCCAGCTCTCATCATCAC ..:....x:..xxx..::.x:..x:...::.....x.....:--------------------.:x::..xx..x.x.:..:.:..:.x.......::.::.x.x..:.....::::..........:.::x:..:.......:.:........:.x.xxx:........:.x..:.x.:..:.:.....---.:.:.:.....::.xx:x.::x.x.x.--------.:....:...:....:.:.:xx::.x.:.:.x......:..x................:..........::...-----.:...--.x..:...........................:...:x....:...........:x.:............:.x..:...............................................................................................................:...:.----------....::.:x.....:...------------------------------------------..x:x.....:..:.:.:...x:..--------------x:.::x....x..................:.:.-x:..x....:x..:...::x...:xx::.------........x.-----x..x.x:..x.x:.:.x....::.x..x:x.:..---.:x....-.:::..:x...:.:xxx.:..xx..x..-----------.:::xx......:..:xx..-.xx....x.xxx.:x:x.xx:x.xx.x:x:::x.:...xx:x:.--..:..x........................x.x....:.:x.................xx..:...::x:....:......x:x::::x.:x:.....x..... 42M20D127M3D27M8I74M5D5M2I193M10I18M42I25M14I33M1I29M6D10M5D34M3D7M1I28M11D20M1I44M2I104M 577/820 70.4% 901/94230402 0.0% 134/820 16.3% 50579328 NA +4018 chr4 + 190214555 104396136 104396135 104396415 280 TCTTTTTTTTTTCACCCTTCCTCTAGGGCAAAAAGGAGGCAAATATCTAAAAAGCTAAATAAAAT-----TCTCTAACAGAGAGGTCAGAAGCTCCAATGATCTTCTGAG-ATAAGTCAATTTCCAGCAGCTGTGGCCAGATATTGTAGTTCAAGGCCTTGAAAGCTTAATTGGGGAAGCATGTTAAAAGTTAAAGGGCCAGAATCATGTTAATTACATGAGGTTTTCCTTGTAGAAAATCTG-------CCCAA---CACAATGCTACCCTCTCTCTTCTGTAGATAAGGGTATG chr4 - 94230402 79522460 79522459 79522741 14707662 14707661 14707943 282 ttttttttttttttttttttttttAAG--AAAATCTGTGTAATATTCTAAA----TTAAGAACATGCTCCTCTCCGACATTTCATTTGGCAGCTCTAACCACAGCCTGGGTGGAAATCAATTTGCAGCAGCTATGAATTGCTATTTAATTTGGGGGCACGCACAGCTTAATTGAGAAAGCATACTAGAAGCCGTCAAGCCAGA-----GTCAGTAACTTAAG---TTTCCTGCAGCAAACCCACGATAATCCCAGGATCAAACTGTAGCACCTTTGTTTCAGTAATTAAGTGCATG .:..........:x:::..::.:..:.--....xxx:x.:..xxx......----.x..x..x..-----....::...xxxx:x.::.x.....:..:x.:xx:...:.-:x..:.......x........:..:x:x.x....xx.x..x::...x:xx.x..........:.:......::..:...:::xx::......-----..:.:.x..x.:..---..:.:..:..x...:.::-------....:---..x.x..:x:.x.::.:x:...x...:x....x.:... 27M2D22M4D10M5I40M1I92M5D14M3D18M7I5M3I38M 163/266 61.3% 282/94230402 0.0% 30/266 11.3% 24873676 NA +5406 chr4 + 190214555 104396215 104396214 104396352 138 GTCAGAAGCTCCAATGATCTTC-TGAGATAAGTCAATTTCCAGCAGCTGTGGCCAGATATTGTAGTTCAAGGCCTTGAA-AGCTTAATTGGGGAAGCATGTTAAAAGTTAAAGGGCCAGAATCATGTTAATTACATGAGG chr4 - 94230402 86977603 86977602 86977734 7252669 7252668 7252800 132 GCTAGAGAATCTAAATATCATCATGGGAGAAATCAATTTGCAGCTGCCGTGGACAGCC--------TTAAGGGGTTGAGCAGCTTAATTGGAGAAATATTTTAGAAGTTATAAGGCCAGAGTCATGTCAAGTACATGAAG .::...::x..:..xx...x..-..:..x..:.......x....x..:....x...x:--------.:....xx....:-...........:...::..x...:......x.:.......:......:..x.......:. 22M1I35M8D13M1I60M 97/130 74.6% 132/94230402 0.0% 10/130 7.7% 17418612 NA +5500 chr4 + 190214555 104396238 104396237 104396361 124 GAGATAAGTCAATTTCCAGCAGCTGTGGCCAGATATTGTAGTTCAAGGCCTTGAAAGCTTAATTGGGGAAGCATGTTAAAAGTTAAAGGGCCAGAATCATGTTAATTACATGAGGTTTTCCTTG chr4 - 94230402 53816800 53816799 53816922 40413481 40413480 40413603 123 GGGATAAATCATTTCACAGCCGCCACAGCCAGAAAGCGCAGCTCGGATTCCAGAGAGCTTAATTAGG-AGGCATGTTAAAAGTGAAAGGGTGAGAGCTGTGTTAATTACCGGGGGTTCCTCTTG .:.....:...x..:x....x..::::......x.x:.:..:..:::x:.:x..:.........:..-.:.............x......:x...::::..........xx.:....:::.... 67M1D56M 85/123 69.1% 123/94230402 0.0% 1/123 0.8% 50579438 NA +4059 chr4 + 190214555 104396241 104396240 104396327 87 ATAAGTCAATTTCCAGCAGCTGTGGCCAGATATTGTAGTTCAAGGCCTTGAAAGCTTAATTGGGGAAGC-ATGTTAAAAGTTAAAGGG chr4 - 94230402 69072267 69072266 69072354 25158049 25158048 25158136 88 ATAAATCAATTTGCAGTAGCTGTGGACAGCTATTTAAACATAGGGCCAGAAAAGCTTAATTGTTAAAGCAATGTTCAAAGTTGGAAGG ....:.......x...:........x...x....xx.::x:.:....xx:............xx:....-.....x......::.:.. 69M1I18M 65/87 74.7% 88/94230402 0.0% 1/87 1.1% 35323974 NA +23572 chr4 + 190214555 104413392 104413391 104413824 433 TTTTTCTTAAGTTATAGGAGCTC-ATTTCATTATTTGTTGAACCCTCCAGTGACCCTGGGATTTCACTATATAATTTATGTTTCCTGATACAATTCAACAGTGTAATCTTATGATTTATGTGCTTCATTTATAATTTGATCATCTCAGTATAATGCATGTTTTTCTACATGATTTATGTACTTTATCCCATAATATATGTGTTTCACTGTATGATATATGTATTCATCAGCTATGTATTATGGCCCTGGTGGCACATTCCTAGAAGAGGAGGCAGAATACCCCAGCCTGAGGGTAAGTCCTGAGGTTAATTGCAATCAATTCACCTTCCACACAATTACACTTTCATCTGCTGGAGCTTGTGAAGTGAGCATGCTTAACATGGCAGCAGCAGGGAGGCAAGTGTGCCAGTTTCTTTTTTTCTAGATCCAAGAAA chr4 - 94230402 53821587 53821586 53822017 40408386 40408385 40408816 431 TTTTCCTCCAGCGACGTGAGCCCCATTTCATTACGCCATGAACCTCTCGGTGAACCTGGGATCTCGCTGTATAATTTATGTCTCCAGATACAATTCAACGGTGTAATCTCATGATTTATGCGCTTCATTTCTAATTTGATCATTTCACCATAATACGCGTTTTCCTACATGATTTATACGCGTGCTCCAGCAACGTATGTGCTGGGTGCCACAATGTACACATTCATCAGCCGCGTGGGATGCCCCCGGTGGCACTTTCCTGGAGAGGAAGGTGGGACACCCCAGCCCGAGGCCAAGTCCCAAGGTTAATTGCAATCAATTCACCTTCCATGCAATTACACTTTCATCCGCACGTGCCTGTGAAGTGAGCGTGCTTAACGCGCTATCAGCGGGAAGGCAAATGTGCC---TCTTTTCCCCCCAGAGCCAATAAA ....:..:x..:x.::x....:.-.........:x:xx......:::.:....x........:..:..:............:...x.............:.........:..........:.........x............:...x:.....:.::.....:.............:::.x.xx...x::..::......:.xx::xx:.::..:..:::..........:::..:xx...x...:........x.....:..:::.:...::.:.:.........:....x:......::............................::................:..xx.x..:............:........::.x:.x....:..:......:......---.::...::::.:...x....x... 23M1I383M3D24M 322/430 74.9% 431/94230402 0.0% 4/430 0.9% 50591805 NA +59500 chr4 + 190214555 104424431 104424430 104425495 1065 GAGGAAGACAATACGCCTTTGTGTCTGTTGAGA-GAAACCTCCTATTTGCCTTTGTTGTCTGAACGAATTTCACCCTTCTGTCAAAGTGTGTCCACTCTAACCTTTCCTTTCGCTCTGCTGGCATCTCTCCAGTCTCCAAAATGCATGTTTGACTCTCATCTGACACCTTTATCTGATACAGTCACAACACTTCTTTGCATAATGAGCAGGCAT---TCCCTACCCATCAG---------AAAGGTAATTAAAAAAATGTTTAGATTTTT---------------GTTTTCATAGACGTAACAGTATAAATGCAACTTCTGCTCAATTAAGCTGCAGTGTCAGTGAGAGGGGGAGGGGAGGAATGGTTCTTAAACAAGAGCGGATTTTATGTTTCTATCTTAAAACTGGAGATACGGATTTGTGATTTTCCCTCCC-----CCATGGAAAGAAATCTTTAAATAAAGATGTCTTCATCTGAATTGACCA--------------------------------------------------------------CCGTTTATAAAAGC-AAATCTGGTCGGGGCTCTG-CTGCTTATGCTGAAGGAACATTCCTCCCCATTACAACGGCATTTGCACATTTATAGGAGGAATAAAGAAA--------AAGATGCATGATACATGTGAAGGAGCCTTCTCTCTGCCATCCAGAGAAAGAAGAACTAAAAGGATTATAAAAGTTCAGATTAAAATGATATAAAATCTAGCATTTGGCTCCAACACTAGTGCCTTGGTCCTCTGAAGCTAATCTGTATGCACTCTGTGACCTCCTCGCAGCGAACCCTGCTAAATATATTATTCCCACGGGGGCTTTCACTGCTGCTTGGTGTCAGAAATCAATATGTATGAGGCGCGTGGATGGGAATTTCTAATAGATCTGCCTGGCCCTGTGCTGCTTTTCAATATCTGCCTTGGACTATTAGTGCCGGCTCGGTGCCTGTGAAATAACCGAGATAATCTTTTAAGGTGCACTGTTAAGGTGGAACCTAAATGTTGCTGTTTCAATTAAAACAAAAA-----TTATATTCATAAATCAGTCAGGTC--TGTGTAACCTTGTATAGTCACTCTGGAAGGCTGATTAGAAAGAA-GGTGGGATTTAAAGCTTTTGGGAGTGCA chr4 - 94230402 53827530 53827529 53828680 40401723 40401722 40402873 1151 GAAGACGCCAGTAAGCTTTTGTGTCTGTTTAGCTGAAACCTCCCGGTTTCCTTTGTTGTCGGAGTGCATTTCACTCTGGTGTCAAAGTGTGTCAACCCCAAGCTTCCCCTCCGTGCCGCTGGCATGGCTCCAGCCTCCCAAGCGCCTGCTTGGCTCCCTCCTGACACCTCCATCTGATCC-GTCACAACACCTCGCCGCATAACGAGCAGGCATCATTTCCTCCCCATCAGCATACGCAGAAAGGTAATTAAGGC--TGTTTAGGTATTTTTTGTTGCTGTCATCGCTTTCCGAGGCTCAACAGCACAACTGCGACTTCTGCTCAATTAAGCTCTTGGataaaaataaaataaaataaaaGA--GGGTCTTTGGCA-----GCCCTTTATGCCTGCACATTAAAGCTGGAG-------CCTGGGATTTACACACACACGACCTGTGAAAGGAAATCTTCAAATAAAGATCTCTCCAGCTGGAATGACCATTATGATACCCGTTCACATGCATATCTATATCTATCTGTATGGATATATACATGCACACGCACCGTGTATAAAACCCAAATCTGCTGGTGCCTCTTTCTGCTTATGCTAAGGGTGCCTTCCTCCCCATTACAACAGCATTTGCACATTTATGGGAGGAATAAAGGGGGGGGGGGGAAGATGCGTGATCCATGCGGAGGAGCCTTCCCTCTGCCAGCCAGAGAAAGAAGAACTAAAAGGATTATAAAAGTTCAGATTAAAATGATATAAAATCTAGCATTTGGCTCCAACACTAGTGCCTCGGTCCTCTGTAGCTAATCTGTATGCACTCTGTGACCTCCTCGCAGCGAACCCTGCTAAATATATTATTCCCACGGGGGCTTTCACTGCTGCTTGGTGTCAGAAATCAATATGTATGAGGCGCGTGGATGGGAATTTCTAATAGATCTGCCTGGCCCTGTGCTGCTTTTCAATATCTGCCTTGGACTATTAGTGCCGGCTCGGTGCCTGTGAAATAACCGAGATAATCTTTTAAGGTGCACTGTTAAGGTGGAACCTAAATGTTGCCGTTTCAATTAAAACAGAAAAAAATATATATTCATAAATCAGGCGGCGCCGCGCGTAACCTTGCGT----------GCAGCCTGATTATAAACAATGATGGGGATTAAAGTATTAGGGCGAGTA ..:..x.x..:..x..:............x..x-.........::x..x...........x..::.x.......:..xx..............x..:.:..x...:..:.:..:x.:........xx......:....x..::..x..:...:...:.x:.........::.......x.-..........:..x::......:..........---.:...x........---------............::x--.......:.x...---------------.:....xx..:.x:.....:.:..x...:...................x:x.x:.x.:x:x:.::x::.:x::.:..--..x....x::..-----.xx:......::.x:.:x.....:......-------::..x.....x.x.x.x.-----.::..:..:........:..........x...:..x...:.x......--------------------------------------------------------------....x.......x.-.......x.x.x.x....x-...........:.:..x:.x.................:................:............:::--------.......:....x....:.:..........:........x....................................................................................:.........x...............................................................................................................................................................................................................................................................:...............:...-----x................x.:.xx.--:.:.........::.----------.x..x.......x...x..-.:....:x......:x..x...x.x.:. 33M1I146M1D33M3I14M9I15M2D13M15I77M2D12M5D30M7D18M5I48M62I14M1I19M1I70M8I410M5I24M2I15M10D19M1I28M 871/1038 83.9% 1151/94230402 0.0% 140/1038 13.5% 50596901 NA +3185 chr4 + 190214555 104438171 104438170 104438240 70 TATAGA-TAAATATATGTGTGTGTGTGTATATATATATACATATATATATACACACACACACATAGAGAGA chr4 - 94230402 35554951 35554950 35555021 58675382 58675381 58675452 71 TATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGA .....:-.........x..x........::.:....:x:::.........:..:...x.x.::.:x..... 6M1I64M 51/70 72.9% 71/94230402 0.0% 1/70 1.4% 68883220 NA +3004 chr4 + 190214555 104438176 104438175 104438231 56 ATAAATATATGTGTGTGTGTGTATATATATATACATATATATATACACACACACAC chr4 - 94230402 65364575 65364574 65364630 28865773 28865772 28865828 56 ATAGCCATGTATGTGCTTGTCTGCATATAGATACATATATATGTGCATACACACGC ...:x:..:.:....:x...x.::.....x............:.:..:......:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 39073601 NA +3360 chr4 + 190214555 104453129 104453128 104453262 134 CTGTCTAA--AAAATAAATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 56332121 56332120 56332256 37898147 37898146 37898282 136 CTGTCTTATTAAAATAAAATAAAAAGAGACAGTGACAAGAAAGCATCAAAGAAATAACAGTCCCTACAAGAACAGAATCAAAATAGGAGATAAATGAAAGATAGAAACAAAGAAAAAGAAAAGCAGACAGAAGTAA ......x.--........x......:::.x.:x..x......:x.xx:..:.::x..x::xxxxx.x.....x....xx:...x.::...x..:x:..::.x.....x:..::..........x.:.x.:...x.. 8M2I126M 84/134 62.7% 136/94230402 0.0% 2/134 1.5% 48121008 NA +3296 chr4 + 190214555 104453134 104453133 104453303 170 TAAAAAATAAATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAA--GAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGA chr4 - 94230402 33149041 33149040 33149195 61081208 61081207 61081362 155 TGAAAAATAAATTAGTGCAGAATAGAGCAGGTGATGGGAAAGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAACAGAAATAAGATTAGGCAAAGGAAATCTGAGGGGAGAAGAAGGCATAA-----------------AAAGAGAATTAGAAAAGA .:............:x:x....x.:..x:::x:.x:::..::x.:.xx.:xxx.:...:...x.:.:.x....x.:x..:.:.......x.....x:.:.xx.::x...:....x--..:::..:.....::..x..-----------------.....:..xx........ 115M2I20M17D18M 94/153 61.4% 155/94230402 0.0% 19/153 12.4% 71304093 NA +3183 chr4 + 190214555 104453137 104453136 104453228 92 AAAATAAATTAAAAA-----AGAAA-------AAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066953 25066952 25067056 69163347 69163346 69163450 104 AAAATAAGTTTAAAAGCTTCACAAAGGCTGCCAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .......:..x....-----.x...-------.....x.::x.:..:..:x..x:..:..x:::.:x.:...:::.:........:......x........... 15M5I5M7I72M 65/92 70.7% 104/94230402 0.0% 12/92 13.0% 79386184 NA +3479 chr4 + 190214555 104453144 104453143 104453263 120 ATTAAAAAAGAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAG-----AAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 56332128 56332127 56332252 37898151 37898150 37898275 125 ATTAAAATAAAATAAAAAGAGACAGTGACAAGAAAGCATCAAAGAAATAACAGTCCCTACAAGAACAGAATCAAAATAGGAGATAAATGAAAGATAGAAACAAAGAAAAAGAAAAGCAGACAGAA .......x.:..x...:...::x.:x:.x.::....x.xx::.:...x..x..-----.x.....x....xx....x.::...x..:x:..::.x.....x...::..........x.:.x.:.. 53M5I67M 78/120 65.0% 125/94230402 0.0% 5/120 4.2% 48121016 NA +3190 chr4 + 190214555 104453153 104453152 104453259 107 GAAAAAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAG chr4 - 94230402 81502062 81502061 81502168 12728235 12728234 12728341 107 GAGAAAGGAGAAGCGAAGCCAGAAACAGAAAGGAAAAAGCAAATACGAAATCAGTAAGATGGCAAAAGCTGGAGATTAAAGAAAGATAAAAATAAGCAGAAGAAGAG ..:...:......x:..:xx.....x:............x...x.x:.:.xx..x..:.x::x.....xx::::.xx:..:.:.:.x....:x..:x.:.....:.. 107M 66/107 61.7% 107/94230402 0.0% 0/107 0.0% 22951091 NA +3359 chr4 + 190214555 104453157 104453156 104453348 192 AAAGAGAAGAAAAAAAAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAA---------------AGAAAAAAAAGAAAAGAAAAGAAAAGAAAA---GAAAGAAAAGAAAAGAAAAGAAAAGA--------AAACAAAAGAAAA-------CAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 56098324 56098323 56098548 38131855 38131854 38132079 225 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA .:...x...x.:x..:.x.:x::...:...x::...x..x...:..:.---------------...:.::x:..:x::.x......:.:.::x---..:..xx::.....::xx:...:..x--------.....:...:..x-------.....::x.:...:.:......:......x..::::::.:...:..:xx..:....xxx.....:...xx..x.. 48M15I30M3I26M8I13M7I75M 116/192 60.4% 225/94230402 0.0% 33/192 17.2% 48354833 NA +3777 chr4 + 190214555 104453172 104453171 104453284 113 AAGAAAAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAG chr4 - 94230402 54300388 54300387 54300493 39929910 39929909 39930015 106 AGGAAAGGTTAAGTGCCAGGAACTGAAAAGGGAGGGAGAAA-------GACATGGAGAGGAAAGGAAGCCAAAAAAAAAAAAAAAACCAACCCAAAACAAAACAGAAGAAAAG .:....:.xx...x:xx.:...xx......::.:.:.:...-------..x.x.:.:..:....:...xx..:....:....:...xx..xx.....x......:........ 41M7D65M 73/106 68.9% 106/94230402 0.0% 7/106 6.6% 50152784 NA +3334 chr4 + 190214555 104453177 104453176 104453259 83 AAGGAAAGGAAAAAGAAAAGAAAAGAAAAGAAA--AAAAAGAAAAGAAAAG---AAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAG chr4 - 94230402 5029094 5029093 5029181 89201222 89201221 89201309 88 AAGGAAGGGCATGAAAAAAAAAAGGGAGAGAGGTCAACAAGAAAAGTACAGCTTAAAGGAAAAAAAGGAAAAGAAAAATAGCCAAAAG ......:..x.x:.:....:...:.:.:...::--..x........x.x..---...:.....:..:..........:x.:xx..... 33M2I16M3I34M 61/83 73.5% 88/94230402 0.0% 5/83 6.0% 99424083 90790472 +3765 chr4 + 190214555 104453187 104453186 104453341 155 AAAAGAAAAGAAAAGAAAAGAAAAAAAAGAAAAGAA-AAGAAAAGAAAAGAAAGAAAAGA-----AAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAA--GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAA--GAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..::..x.x.x:.....x:..::.:...........-:...x.......x:::..::x.:-----:......--:......:......:x:..:.x..::..x::......x..x:x....--.::x:..x..:::......:..:.:x.:x:::.x...... 36M1I23M5I7M2D47M2I40M 97/153 63.4% 161/94230402 0.0% 10/153 6.5% 60399210 NA +3193 chr4 + 190214555 104453192 104453191 104453351 160 AAAAGAAAAGAAAAGAA-AAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..::..x.x.x:.....-::.::.....::...::.::...x......:x:::..::x.::xxxx:......:x..:.::.x.x...x...x.x...::.x.:......x.:x:x.:..:x.::x:..x..:::......:..:.:x.:x:::.x...... 17M1I143M 88/160 55.0% 161/94230402 0.0% 1/160 0.6% 60399215 NA +3797 chr4 + 190214555 104453208 104453207 104453377 170 AAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAA-------------------AAGAAAAGAAAAGAA-------AAGAAAAG---------AAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAGTGCT chr4 - 94230402 88358901 88358900 88359105 5871298 5871297 5871502 205 AAAAGAAAACAACAAAAGAAGAGAAATGGAAGAAAAAATGAGGAGAGCCAAACAGGCAAGAGAAAAGGCTGAGCAAGATAGGCTGGAGAGACAGAAAAAGAAGCAACGGTTGCTTGATATGAACAAAGGTAAGGCATCGGTTTTAGTAGAGCAATTTGTTAAAAGAAAAAACAAAAAAGAGGGGAGTAACAAACTGAAGACTGTT ....:..:.x..x.......:.....x.:.......:.x:..:.:..xx..:x.::...:......x:xx:::x....x.:.xx::.:...x.::.......-------------------..x...:.x..:.x.-------x..x.:..---------.........:.x..:...:..:::..x..x:..xx...:.x..:. 102M19I15M7I8M9I45M 110/170 64.7% 205/94230402 0.0% 35/170 20.6% 16094307 NA +3569 chr4 + 190214555 104453211 104453210 104453370 160 AAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAA-AAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..::..x.x.x:.....x:..::.............-:...x.......x::::x::x:.:xxx::..::..:.:.:....x.....x:..x:x......x.....::.x..x:x..:.:x:.:x:::x....:..::..::...:x..x:.::x.:.:.. 36M1I124M 90/160 56.2% 161/94230402 0.0% 1/160 0.6% 60399234 NA +3489 chr4 + 190214555 104453213 104453212 104453328 116 AAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAA------AGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ..:x...:.::.::..........::.:.:.....------::.....x....:xxxx.:.x:..:..x:..:x.:.::..x..::....:..:......x.xx:....:..:.:...x.:. 35M6I81M 72/116 62.1% 122/94230402 0.0% 6/116 5.2% 73920049 NA +3342 chr4 + 190214555 104453220 104453219 104453311 92 GAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAA-----CAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAA chr4 - 94230402 10862979 10862978 10863075 83367328 83367327 83367424 97 GAATAGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACAAAACAGAGAAGAAAGGAAGAGACAAAACAA ...x......:....:...:.....::x:.:.:.:x...:.x.....xx.....-----..x.x:x...:x.:....:...:...:...x..:.x.. 54M5I38M 63/92 68.5% 97/94230402 0.0% 5/92 5.4% 93590241 NA +3424 chr4 + 190214555 104453230 104453229 104453326 97 GAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA chr4 - 94230402 10862979 10862978 10863075 83367328 83367327 83367424 97 GAATAGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACAAAACAGAGAAGAAAGGAAGAGACAAAACAA ...x.....:....:....:.....::x:.:.:.xx...:.x.....xx.....x:x:xx.x.x.x.:..x...:......:...:...x..:.x.. 97M 64/97 66.0% 97/94230402 0.0% 0/97 0.0% 93590251 NA +3235 chr4 + 190214555 104453256 104453255 104453344 89 AAAGAAAACAAAAGAAAACAAAAGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAA----------GAAAAGAAAAGAAAAGAAAAGAAAAGAA chr4 - 94230402 16588113 16588112 16588211 77642192 77642191 77642290 99 AGAGAAAACAAAGGGAAACAAAAGGGAAGAAAAGAGGATTAGAGCAGAGACCTTATAAAAATGACTTATGTAAAGAGGTAGGAAAAACAAGGAATAGAA .:..........:.:.........::.........::.xx...:x...:.xxxx.x:....----------:..:..:x.:.....:x..:...x.... 61M10I28M 62/89 69.7% 99/94230402 0.0% 10/89 11.2% 87865143 NA +3073 chr4 + 190214555 104453278 104453277 104453357 80 AGAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAA chr4 - 94230402 70253822 70253821 70253901 23976502 23976501 23976581 80 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGA .....::xx.:.............::........x::.x..:x.:..:.:..x.x.:.x....x..:x.:.x...:..:. 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 34199456 NA +45632 chr4 + 190214555 104468170 104468169 104469016 847 AAGCACTCATTCTGCTGACATAAGGGCAAGTGTAGAATTATAAACTTTTTTTATCATAAACAAAATTAAATTTTTATGATCATATGCTCATTGCTTAAAATCCCACAAATGAAAATTTATCATGGAAAAATAGAGATATTTTGAGTACTAAAGTCCTTTATTCAACAACACAGAAATTTCACAAAAACAACTTTACTGGGCAAATTGAATGTGATTTTTTTTACTTTTTTTTTTTTTTTACAGTTTTGTACATGCCCCATAAGTAATTTTCTTT-AATAAATACACTGTTTTCCAAAACCGTTTTTT---AAATAATTGCACAAGCATACATACACCTTACACAAATATCTATTAGAAAATTTAATAGATAACTGCACAGTTCAGAAG-AGGAGAACACTGTGAAAGGAGTACATTT-TGTGGCCCATGTTCCTGAAATA------TCTGTTT---TGCAATTGTGAAAATGGAATCCCTCCTAATATAGTAGCTGTCTTTTATTCACTAGGAATACAG---ATCTCAGTGTGAAA-TGCCAAATTTAATAAAAAAAAAAAAACTGAAACATTTAGCTGTTACATGAGAACCAACTGTTTGATATCACTGTGAATCTAACCATGATCAAAGACCCGCTACGGCTTTTTGCTGAACATATTTGACCCTGAATAGTGTGTTCATTTAACTGCTTTCCTTTTTTCATTATTTGATTACAGATACTTATCAGCTTAAAGACTTTATATGCTTTAGCATTAATTGCACAACTTACATATCAGGGTTTCTGATTGAAAGGAAGAGAATATTCCTTTCTTTTAGTGATTGCTTAATATTAATTCATA------ATAAGTGCACCATCTCTTGCTCCTTA chr4 - 94230402 53835064 53835063 53835902 40394501 40394500 40395339 839 AAGCATTCATTCC-CAAACGCGTGATTGAG-GTCAGCTTTTGGACCCTCTTCATCATTTTGAGGATTC--TTTTTTAAAAGAGGTTTTCGTTGCTTAAGATCCCACAAACAAAACCTGTTTATGGAAAAAGAGAGATATTTTGAATACTAAAGTCCTTTATTCAACAACACAGAAATATCACAAAAACAACTTTACTGGGCAAATTGAATGT---------------------TTTTATACAGTTTTGTACATGCCCCATAAGTGATTTTTTTTTCATAAATACACTGTTTTCCAAAACTGTTTTTTTTTCCATAATTGCACAAGCATACATACACCTTACACAAATATCTATTAGAAAATGTAATAGATAACTGCACAGTTCAGAAATAGGAGAACACTGTGAAAGGAGTACATTTCTGTGGCTCGTGTTTCTGAAAAAAAACCTCCTAGTTCCCTGCATTTGTGAAAATGGAGTACTTTCTAACATAGGAGCTGTCTTTTATTCACTAAGAATACAGTAGAGCTCAGCGTGAAACTGCCAAATTTAATAAAAACAAAAT--CTGAAACATTTAGCTGTTACATGAGAATCCACTGTTTGATATCACTATGCATCTAACCATGATCAAAGACCCACTACTGCTTTTTGCTGAGTGTATTCGACCCTGAATGGTATGTTCATTTAACTACTTT-CTTTCTTCATTATTTGATTACAGATA-TAGCCCATTTAAAGACTTGATATGCTTTAACATTAATTGCATGACTTACATACCAGGGGTTC----TGCACAAAAGAGAGCATTTCCCCTCTTAGGGGGGGGTCTGTTATTAATTTACAGAATGGGTACGTGCGCCTCCCGTTCAGCCTTA .....:......:-.x:..:::x.:x::..-..x::x..x.::..::.:..:.....xxxx.::...x--.....xx:.xx.x:.x:..:........:..........::...x:.xx.:.........x.............:................................x..................................---------------------....x..........................:.....:...-x.......................:.......---xx.................................................x.........................:-............................-......:.:....:......x.------:..:x..---....x.............:.x.:.:....:....x...................:........---.x.....:......-..................x....x--...........................:.x................:..x......................:....x............:::....:..........:..:.............:....-....:.....................-.x::.x::..........x..........:...........::.........:.....x...----..x.x::......::...:.:::::..x:.x.:xx.::.:x........:.:.------:..x....:..x:.:x..xxx..... 13M1D16M1D37M2D142M21D41M1I32M3I78M1I28M1I22M6I7M3I63M3I14M1I24M2D130M1D26M1D62M4D53M6I26M 675/814 82.9% 839/94230402 0.0% 58/814 7.1% 50633106 NA +17976 chr4 + 190214555 104469616 104469615 104470265 650 TACAGGGACATATGAGGAAGAAAACTAGAGAAAGGCCAGAAGAGTCATCTCTTTCTTCAA-CATCACCAATGAGAACTTTATATGCATCCTACATTATATAAATGGAGTTTAACCAAAAACATTAAAAAGTGGGTGGTATAAAAGAACAATATCAAGAATAAAAA--ACATAAGAGAATTAATGAAAAG-CTACACTTTCTCATTT-CAGTAATCAACAAATTTTCTT-------TCATTAAAAAAAT-GAATTGACATGTAAAACACCACAGTTTACAATATACAGATTCATTAGTTCTTTTAGA------------------AAGCAAACAAACAAAAGCACACCAAGACATGCACTACTAGAATGTATTTTAGACTCTCAGTATACTTCTATGAGATCTTTAGGTTATTGTATGCCTACTGTAGCCTGAATAGAAGTTTGTTTC-ACTTCTGTAATAACAATCATCATTTTCCAAAGAGCAAGGCAAGCTTATCATTCAAGTGTGAAAGTAAGTTTTCACTTACTTGTAATTAATTAGCAAATTGGTAAACAAAAAACAAAAAATAAAATAATGGAAAAGGAAAAAAAAAAAAAAACTCATACAGCTCTCATTGGTCCCACAG-CAGAAGCTGAAATTCTAACTAGATAG----AAACCCTCAAAGAAATATACATCAAGTAGA chr4 - 94230402 53836143 53836142 53836772 40393631 40393630 40394260 630 TACAAATACGTATACAACAGGAGA--GGGGGAAGGCCAGCAAAGGGATTTCTTTCTTCAAACATCCCAAACCAAAATGCTCTGTGCATACTACATCTCAGAAATGCCATTTTCCCCAAATC--CAAAACCGCGATGGCGTAAAAGAACAATATCCAAAATGAAAGCCACATGGGGAAACCAAAGAAAAATCAACTCTTGTTCTTTTTCAGTAATTAACAGGTTTGCTTGTTTGTTTTTTTAACAATTTTGAATTGACATGTAAAACACCACAATT-ACAATATACAGATCCATCAGTTCTTTaaaacaaaacgacaaaacaaaaaaaaaaaaaaaagaaaGCACATCAAGACATGCAACATTAGGGTAT----TAGACAGTAAGTACATTGCTATGAATATTCT------TTGTACACCTAATGTAGCCTGAATTTAATCTTGTCTCTACTTCTTTAAGAACAATCACAATTTTCCAAAAAGCAAGGCAAGCTTACCAGCCAGATGTGCAAATAAGGCTTCGGTTGAT--AAATCAATCAGCGTTTTGGT----------------------------------------AGAGAAGACCTTATAGAGCTTGTGTTGGTCAAGCAGTCAACAATAGAGGCCCTAACCAAAAAGTCTCAAACACAAAGAGAAATCTGTACACAGTTGA ....::x..:...:x::x..:.:.--:.:.:........x.:..xx..:...........-....x.x..:x.:..:x:.x.:.....x......:x:.x.....xx:...xx..x...x.--:....xxxx.:...::...............x.:...:...:--....::.::..::..x.....:-.x..x...x:..x...-.......:....::...x...-------.:x....x..xx.-.......................:..-.............:...:........x.:.------------------..:x...x...x:........:...........x:.:...::.:.----.....xx.x....:.:.x......:xx:.:.------.....::....x............xx..x:....:..-......x...x........:x..........:...............:..x:..::....x..:....x:...:x..:x.--x...:...:...:xx.....----------------------------------------.:.:..:.x..:...x....:x::......xx:...-..:x.::x..::::.....:.:.x..----....x.xx.:......x.::.:xx...x.. 24M2D34M1I60M2D42M2I22M1I16M1I21M7I13M1I26M1D30M18I45M4D31M6D37M1I80M2D20M40D36M1I26M4I30M 422/593 71.2% 630/94230402 0.0% 94/593 15.9% 50633473 NA +60428 chr4 + 190214555 104471485 104471484 104472540 1056 CTGAGTACTCTGCCTTACAGTGCAACCCAAGACAAGTCAACTACACTA-AGTATTTG-GGAGGTATACCCTTCTGTACAGCTCGTTTGTAAGCAATGCAAGTGCAT-AACCACTACTCTAATATAGTGCTCAAAAGATTAATTGAAACTTTCATAACATCTTCCCCTCTTATAACAATAAAACTGAAGGTAATTGGTGGATGCATCATAATCTTTTAGTCTTGTAAAACTTGGCATCAAGTCTCTATGGAAAGATGCATGGCAAAATGGTGCCAGTGCTGTTGCTGCTTCTAAACCACTGGCAAAA-AATAGTTAAAGCTAAAATTTATTGCTCCAGATTTAACTTGCAGAACCATACTGTTGTGTACAAACTGTTAATCTCCATAGATGCTCAGACATGATTGTCTCCTTGTGTCTAAACACACAAAATACAAGCTGCTATCTGTACAGTTTACAGTACTGAAACACATATATTTGAAAATGAAGTATAGATATG-TACTTTGCAAAGATACATGATTTTACAGCAGGGGTTTACCCAAAC------------------------------------------TTATTTTTTACAGCCACTTTCAAAATAGACAACAACTTCACTACTATAGCTAAATTACATCAAAGAAAGAATCAGCGTATTGAAAGTAAATAGACTGGCCAATTCTCCAAGCTCTCACATTATTTTTATGTCTTTTTCTTTTCTTTTCCTCTTTTTTTTTTTTTTTGAAGAAAGCCCTATACATAAAATGAAAATAATTTCTGGATATTTTCTTCAGTGGTGGACTAAGCAGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTTCCAAATGCCTTGAAAATAAGATATACTACTGCTTTAAAAGAACCATCGGAATGCTTCAGCGCTGGGAACAGGTGTTCTCTATAAAAAAAGAGCAAGAAAACAAGTTAAGCTTTCTTTCTATGCCAATATAAAATTAGATTT-------------TTCTCCTTTACACTTCAGCAATATTTTTAGTTACCAATGTACAACATAATGACTTGTATATTTCAACATTTAATAAAAAGAAGAAATGCTCAATCTTAGAACATGACAATA chr4 - 94230402 53837852 53837851 53838925 40391478 40391477 40392551 1074 CTGGGCACTTGGCCTTAGAACACAGTGAAAAGTGGGTCAAACACCATACAGCATTTTTGGATGGATACCCCTATGTAAAGCTCTTTCGGAAGCAATGCAAGTGCATTAACCACTACTCTAACATAGTGCGTGAAAGATTAATCTTACATTTTATG---TCTTCCCCTCTTAAAACACCACGACGGAAGGTAATTGCTAGATGCATCACAATCTTTTTATCTTGCAAAACTTGGTATCAAGTCTCTATAGAAGGATGCATGGTAAAACAGTGCTGCTGTTGCTGCTGCTGCTAAACAACTAGCAAAATAATATTTAAAGCTAGGATTTATTGCTCCGGATTTAACTCGCAGAACCACACCGTTGTGTACAAACCATTAATCTCCATAGATGCTCAGACATGATTGTCTCCTTGTGTCTAAACACACAAAATACAAGCGGCTATCTGTACAGTTTACAGTACTGAAACACATATATTTGAAAATGAAGTATAGATATGTTACTTTTCAAAGATACATGACTTTATAGCAGGGGTTTACCCAAACtttttttgttttttttggctttttttgtgtttttttttcttttttttttttACAGCCACTTTAAAAATAGACAACAACTTCACTAGTATAGCTAAGTTACATCAAAGAAAGAATCAGTGTACTGAATGTGAATAAGCTGGCCAATTCCCCAGGCTCCCAGAT-----------------------------TTTTGTCTTTTGCTTTTGAGGAAACCCCTATACA-GAAATGAAAATAGTATCTGAGTATATTCTTCAGTGGTAGACTAAGCAGTTTCTTAAAACAAGACTTTAGCTTGCCATTCACTTCGGACTGCCTTGAAAATAAGATATACTACTGC-TTAAAAGAACCATCGGAATGCTTCAGCGCTGGGAACAGGTGTTCTC--TAAAAAAAAAGCAAGAAAACAAGTTAAGCTTTCTTT-TGTGGCATTACAACACTCGATTTCTTCTCTTTGTTCTTTCCCTGTACATTTCAGGCATACTCTCAGTTATCTAGGAACAGCACGATGCCTCACGCAGCTTGACAATTCATAGAA-----ACATCCCTACTCCAAGCACACGCCATTA ...:.:...:x......x.:::..::xx..:::::.....x:..xx..-..:....x-...x.x......:.x....x.....x..:.x.................-..............:.......x::..........:xx.xx...:..:---.............x....x:.x:..x...........x.:.........:........x:.....:.........:.............:...:.........:....::....::x..:..:.......x......x...:......-....x.........::............:.........:.........:..:.............::..............................................................x...........................................................-......x.............:....:...................------------------------------------------..x.................x......................x.........:.....................:...:....x..:....::...........:...:....:..x..-----------------------------.:..x.:....x:......:....x.........-:...........:.x....::...x............:..........................x....:.....x....:...x:.x...........................-..............................................--........:...........................-.:..x..x..:..x.:.x.....-------------..::...x....:.....xx...:.:.:.....:.x.x.x...:..::...x..:::::.x:.::...x..x...:..-----.x..x.::.x..:x..x...:.x..x.. 48M1I8M1I48M1I48M3D148M1I189M1I45M42I120M29D34M1D115M1D46M2D36M1D23M13I78M5D28M 850/1014 83.8% 1074/94230402 0.0% 102/1014 10.1% 50633633 NA +10090 chr4 + 190214555 104475712 104475711 104476058 347 TAAATTCAA-AGTCCCAGCTAGGGATTCACACTCTTGATGAGATTACAGTGACTTTCTGGATCTCAGTGATGCTTGCAGGGGATCTTTATCCTGAGTGACAGGAAAGCCAGATTCCCCTGAAGAGAAGGGGGTGGGGAGGTAAAGAATAGAATTGAGTTGATCGGCATTGTTTAAGGCAGCCTTCACTGTTCATGCAGGTGCAAACGCTGACAAACAGCCGTCTTGCTCCCAGGAGGCCTGTGGAGAAACCTGCAGCCCCAGTTCTCTTTCTGGTACTGCTGTAAAGCACAGTGTTCCAGAGAATTCACCCCTACACAAACCAGGTACAACACTATCTTCAAGTCTAA chr4 - 94230402 53840656 53840655 53840970 40389433 40389432 40389747 315 TAAACTCGGGAGTCCCAGCTGGGAAAGGCAGCTCTGGAGGAGATTAGGGC-ACGCTGTGGTCTCGTGCTCTGCCGGCGGGGTATCATTATCCTGAGTGACAGCGAGGACAGATTCCCCCGCGCATCAGGCAAGGAGCAGGCCAGGG----------GCTGATCAGCATTCCTGAAGGCAGCCGTCGCCGTTCGCACTGGTGTAAATGCTGACAAACGGCAGCCTGGCTCCCAGGAGA-ATGCTCAGAAACCC---------------------GTAATGCTGTAAAGCACGGCGGGATGGAGGATTTATCCCTGCACAAGCCTGCTGCCAAACGACCTTCCCGCTTAA ....:..::-..........:..:.xxxxx:....x..x.......x:.:-..x:.x...x:::xx.:xx...:x..:...x...x................x:.:.x..........:.x:x.xx...x::x.:.x...:x.:.:----------.:.....:.....x:.x.........x..:.:....:::.x....:...:..........:..x.:..x...........:-x..:xx.......:---------------------...x.............:.:.xxx::...:...:.:....:.....:..x.x.:.x.x..x.:....xx.::... 9M1I40M1D95M10D81M1D14M21D75M 213/314 67.8% 315/94230402 0.0% 34/314 10.8% 50635056 NA +3018 chr4 + 190214555 104480837 104480836 104480902 66 GCCTTTATCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCATCCTTTCTTCCTTCCTTCC chr4 - 94230402 93281031 93281030 93281096 949307 949306 949372 66 GCCTGGATGTTTCCTCCCCGCCTCCCTCCTCCCCTCCCTTTCCCCCAGCCTGTCTTGTCTGCATCC ....xx..x..:......:x.........:::...:....:.::...x...x....x::.x.x... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 11199806 NA +18402 chr4 + 190214555 104484552 104484551 104484907 356 TAAATGGGTTAAAGATTAAGAAAGAGGAAACCAAAAAATTCAGCAGGCTTGATTTCATACCTAGCTATGGATTCTTACGCTCTTAAAATAAATTAAGAGAAAGCCCAGAAGTTTCACAGAGGAAAAAATATTTCTCATAATGTTTTAGAGTAGAAGTTAACAAGCCTGCTGGGATCCTTTTAGCCCCTGCAGAGCTAAGTCTTCAACATTATTAAATGGCTGTCGCATCTGAAGTATGGTACAACATAACTCAATAAACAACAGAAAACATATGATGCTGAATGGAGGGAGGCTTTTCGATTACCCTGCAGAATAATTCAATTTCAGGACAGGTGTTTGCATGTGATGGAACAAGA chr4 - 94230402 53846311 53846310 53846650 40383753 40383752 40384092 340 TAAATATGGGGAAGCTCTGGAAAGCTG---CAAAAAAATTCAAAAGGCTTAACG-CAAACCTGGCCATGGATTTTTATGATCTTAA------TTAAGAAGATGCCTAGGAGTTCCAGGGAGGAGAAAATATTTCCCATAATGTCTGAGAGTAGAAGTTAACAAGCCTGCTGGGATCTTCTTAGCCCCTGCAGAGCTAAGGCTTCAACATTATTAAATGGCTGTCGCATCCTAAGTATGGTGCAACATAGCTCAACAAAGAGCGGCAAGCACAGGATGCTCAAACAGGAGATGGCTTGAGATGATGCCACAGAGTGA------TTCAGGACAGGTGTCTGCGTGTGACTGAACAAGA .....:x.xx:...x.:x:.....xx.---.x..........:x......:.:x-..x....:..:.......:...:.x......------......::.x...:..:....:..x:.....:..........:........:.x..............................:.:....................x.............................:x.........:.......:.....:...x.:.:.x..:..:.x......x..xx::.:..x.x:..xx...x.:x.::....:.:.------..............:...:.....:x........ 27M3D24M1D31M6D224M6D34M 268/340 78.8% 340/94230402 0.0% 16/340 4.7% 50638241 NA +11371 chr4 + 190214555 104490614 104490613 104490785 172 ACTCTTACCACCTGAATGAAGCTTCTGAGAAGGGGTACTGCATCTTGAAGCCAGACAAGAATCCCTGAAGGGGAGAGGGAG------TGAGGAGGGAAGGGGGGAGACTGGGAAACAAGAAATCATCTCCTCTGACCTCTAGTGAAGTGCCAGGTTTTTTCTTTAGCTCTTCACATTT chr4 - 94230402 53851767 53851766 53851944 40378459 40378458 40378636 178 ACCCTCAGAGCCTGAAGGAGGCCTCGGAGAACGGGTGCTGCATCTTGAAGCTAGACAAGAAGCACTGCAGGGGCGGGGGCAGGGGGTTGAGGAGGGACGGCGGGAGGCTGGGGAAAAAGAAATCATCTCCTCTGACCTCTAGCGAAGTGCCAGGTTTTTTCTTAAGCTCTTCACATTT ..:..:.xx:......x..:..:..x.....x....:..............:.........x.x...x.....x.:...x:------..........x..x.....:.....:..x..........................:....................x.............. 81M6I91M 146/172 84.9% 178/94230402 0.0% 6/172 3.5% 50638847 NA +17973 chr4 + 190214555 104491540 104491539 104491834 295 GGGGACATGCCGATGCGCGCGGCGGCCGCGGCGGCGGCGGCGCTGCTGGGGAAGATGGGGGTGGTGATGCGCGCGATCTTGGCCGCCTGTGGGAAGGCGCCCCCGTTGGTCTTGTAGAAGGAGGTGGCAAAGGAGCGGTAGCGCTCCATTTCCGAGTTGTAATCCACAAGGCTGTTCAGAGCCCCCTCGGGCAAGTGGCTTTCCTTGGGCAAGCCCGGGGCCTCCGGGCTCGGCCCGGGCTCCACGCAGACATTGGTGTTCATGGTGCAGGGGGGGAAGAAGGGGTGCAGGGTGG chr4 - 94230402 53853197 53853196 53853482 40376921 40376920 40377206 286 GGGGGCAAACCGATGCCAGCGGGAGCAGCGGAGGCGGCG------CTGGGGAAGATGGGGGAGGTGATGCGCGCGATCCAAGCCGCCTGCGGGAAGGCGCCGCCGTTGGTTTTGTAGAAGG---TGGCGAAGGAGCGGTACCTCTCCATCTCCGAGTTGTAATCCACAAGGCTGTTGAGGGCCCCCTCGGGCAGGTGGCTGTCCTTGGGCAGCCCCGGCGCCTCGGGGTTGGGGCCGCTCTCCACGCACACGTTGGTGTTCATGGTGGCGGCGAGCGGGCGGGGGTCGGGGGGGG ....:..x:.......xx....x:..x....x.......------................x................:x:........:...........x........:..........---....:...........x.x......:..........................x..:.............:......x..........:x.....x.....x...:.x..x...xx.........x..:...............xx..x.:.x::.x:.....xx:...x.. 39M6D76M3D171M 238/286 83.2% 286/94230402 0.0% 9/286 3.1% 50638343 NA +6582 chr4 + 190214555 104493421 104493420 104493604 184 AGTTCAAAATGGTTATCAATTATAGTAATTATGCTTATAATTAGGTTAATGAACCAGTTAT-GCCCAAACT-CCAAGTGCAAAAACTTCAAGACCTACTGATGAGGTGCTCTAAAAAGAGGGGTTTATGTAAACAAATCCCTATT-AGGCAAAGTAAATCAAGATAAGGAACCTCACCCCAGGCTGG chr4 - 94230402 53854270 53854269 53854451 40375952 40375951 40376133 182 AGTTCCAAATGGTTATCAATTACGGTAATTACGATCGTAATTAGATTAATGAACCGTTCGGAGCCCAACCTACCGAGCGCACCAACTTC---ATCTTCTCCCGAG--GCACCGAAAAGCGGGCTTTATGTCAACAGATCCGAGCGAAGGGAGCGCGAACCTGAGCGAGAAGCCTCGCCCCGGGCTGG .....x................::.......:.x.::.......:..........:x.::x-......x..-..:..:...xx......---.:..x..xx:...--..x.::.....x...x.......x....:....xx::x-...x.:x.::..:.x:::::..:.:....:....:...... 61M1I9M1I17M3D13M2D38M1I41M 128/179 71.5% 182/94230402 0.0% 8/179 4.5% 50639151 NA +14095 chr4 + 190214555 104494278 104494277 104494834 557 GTGACTTTACATGCCTAATACTGTATGTCTGGTCTACCAGAGACATAGAGATCAAAGGTCATATTTAACATTCAGGAGGAGGGGCGGGTGCAGACTAATTAATAAATTAATACAGCGACGCTTTTTCTTGCTGGAGTCCAGCATTAATAATCTACTTTCACAATCCCAACGGACA---------GCAAACATTTAA---------------------------------------------------------------------------------GAGAAAAAAAAGCCAGAGAAAGAGAA-------------------------------------AGAACAATCACTTACCAGTCTCTTTTTATTTGGGGAGCCTTAGAATTTGCAGACGCTGCCAGTCTGCCTTTAATTAGTTGCACATCACCCCCTAACACAAAGAAACACAA---------------------ATCCAGATGTGTCTTGGCAGCTCC-CAATTACAACTTTAATACTTGTAAACAAACTGTTGGGGG----------------GGGGGGGGTAAATAAATATGCGG-----------ATCAAAAAAAATACCTGTAAATGGCTTT----------------TTTTTCTTGTTGCAGAGAGAAGGAGGAGGAGATGGTGTTAGTGGTGGGGGTGGAAGGAGGAGGAGGTGGGGGGAGAGGAAAGAGTCGAGTGTGAGTGTATGTGTGAGAGCGCGGGTCTGT chr4 - 94230402 53854682 53854681 53855405 40374998 40374997 40375721 724 GTGGCCGTGCATGTTCGCTCCCGCACGTCTGTCGTGCAGGAGCCGGGGAG--CAGAGGTCATATTTGACATTCGGGAGGAGGGGCGGGGGCAGATTAATTAATAAATTAATGCCGCGGCGCCTTTTCTCGCCCGGCTCTGGCGTTCGGG---TACTTTGGCGAGCCCGGAGGACAAGAACGACGGCAAAAAATGAAAAATAAAAGATACAAAAAGCCGCCGACAAAGCTCAGAACGAGAAAGATAAAAAAAAAAAAAAGAAAAGCCCCCCCCCTAAGGaaaaaaaaaaaaaagaaaaaaagaaaagaaCACGGAGAAGGAGGGAGGAGAGGGAAAAAAGCAAAGCAGTCACTTACCGGGCTC--TTTACTGGGGGGGC--------TCGGATGCGCAGCCTGCCCGCCGCTAATTAGTTGCACATCAGTCCGTAACACAAAGAAGGAGAGGGAGCAGCGGCGGCAGCGAGCATCCAGCTGTGTCCTGGCGGCTCCTCAATTACAACTTTGCGACTTGTAAACAAACTGCGAGGGGCGGCGGGAAGGGGCGCGGGGGGCGGGGGTGCCCATCCGGCAGCGCCGAGCCGCTAAACAAATACCTGCGAGCGCCGTTCCCCTCGCTCCCTCTCTCCGTCTCGTCGCAGAGA-AAggaggataa---------aggggcgggggaggcggcggggggagaggaaggagcagaaaaggggggagCGCGCGTGTGAGTGTGTGAGTGTGTGTGTAT ...:.:x.:....::::x.x.:.:.:.....x:x.:.x:...x.:x:...--..:...........:......:..............x.....:................:.x...:...:......:..:x.:x..::..:..x:x:---......x:.:.x...::x.....---------.....x.x.x..---------------------------------------------------------------------------------..:........:xx...:...:....-------------------------------------.:.:..:.........:.x...--....:.x....:..--------.:.x.x:...x...x.:.:...x:.................x:..x............:x.x.:---------------------......x......:....:.....-.............:xx................:x:....----------------......x.x:::.:xx:..x...-----------xx.x...x.........::.::.x.x..----------------.::x...:..:.......-........x:.---------..x..:.....x..x:.x:..:....:x.::..::x..:....:.xx...:.:.x....:x.....x...:.:.x..x.:. 50M2D97M3D23M9I12M81I26M37I22M2D14M8D64M21I24M1I39M16I23M11I28M16I18M1D11M9D81M 381/532 71.6% 724/94230402 0.0% 217/532 40.8% 50639596 NA +12637 chr4 + 190214555 104576910 104576909 104577274 365 CTTTCTTTAGGAAAGGATAGTGTTAAAGTGCCATCAAGTAAAATATGGGATTTTCTGCTGAGGTCTTTACATCAGTGAATTTACATTTTGTAAGAATACCCTAAGGGGATTTCAGCTTCCTGACTTAAAAAGTTAGGTGGATCCATTT-CAGTTGTGCACATCCAGCTTCATGCTTTAACATGGCCAGATTGCCATGGCTTCAATTTAAGTCACAGGTTTCT----GGTGA----------------TAATATACATCTACATTTTTACAGTGGTGCCTGAAAATGGGAGTCTATAAAGAATCTGACTTGAATTATTAAGAATGGAAAACTTAAATGTCTGA-CCCCAAACAGGGGTATAAATTCTGCTA-TGTTTTAATGCATTCAC chr4 - 94230402 53872848 53872847 53873232 40357171 40357170 40357555 385 CTTTCTTGAGGAAAGGAGAGTGTTAAACTGCCATCCACTAAAAGCAGCGATTTTATGCTGAGGTCTCCAAGTCAGTGAATTTACATTTCGTAAGAACACCCTGAGGGGCTTTCAGCTACTTTGCTTAAAAGG-TAGACAGATACATTTACAGCAGTGCATGCAGAGCTCCATGTGCTAACATGGCCACAGAGCTCAAGATTCACTTTCTGGCACATGTGTGTTAGGGGTGACTTAGTTCTAAGCAGGTAATGCATAAGGACACTTTTAT-GTGTTGGCTGGGAATACAGTTCAGTAAAGAATGTGACTGTAATTACCGGTAAC-GAGGGTATAAATTTCTGATCCCTGCTTTGTTGGCTGAATTTTGCTAGTGTTTTGAAGCATTTAC .......x.........x.........x.......x.x.....xxx.x......x...........::.x:.................:.......:.....:.....x........x.:.x:.......:.-...:::...x.....-...:x.....:::xx....:....:x:...........x.xx..:xx:.x....x...xx.x....x..x.x.----.....----------------....::.:.xxx...:.....:-...x..x...::...:x::x..x:........x.....xx.....::::x..:-..::::x.....x.....-...::xx:x.xx.xx.:....:.....-......:.x.....:.. 132M1D15M1I73M4I5M16I22M1D53M1D18M1I27M1I17M 260/362 71.8% 385/94230402 0.0% 26/362 7.2% 50704062 NA +3303 chr4 + 190214555 104587709 104587708 104587782 74 TTATTTGAT-CATTTTCTGCACTTCATTTTTTTCTGTGATCTCTTTAAAAATCTCTGATTTTTAAAAATATTAAC chr4 - 94230402 30644753 30644752 30644827 63585576 63585575 63585650 75 TTACTTGATTCAACTTTTGCTCTTAATTTTTTTCTATGTTCTCTTTTAATATCTGATGTTTCTGAAAATACTTAC ...:.....-..x:..:...x...x..........:..x.......x..x....xxx:...:.:......:.x.. 9M1I65M 56/74 75.7% 75/94230402 0.0% 1/74 1.4% 73942956 NA +16598 chr4 + 190214555 104592378 104592377 104593371 994 CGCATGGACAGAGCAAGA------AAAGGGCAGGGTAGTAACAGTGGAAGATTTTAATTATCTTGCCATAGCACAGGATTACATCAAGTGGAGGAAGTGAGGCTGGATCTGGTGCAAAGCTGATTTCTAATTTAATGTGTACATCACCCGAAAAGGGAGGAAAGAATGCTAGGTTTAGAATTAAATAATAT--------------------TTAGGGTTCAAAGGAGAGTATAGGAA--------GCCGTGATTAAAT----------------------CTCATTAAGCATATGATTTAATCCCAAATAGAAGC------------------TAGAGGTGTT----------------TAGAGACAAGAAGGAAG------TGTAGGAAGACAAAATAA----------AATACAGCATATAAT---CATTAATTCAGAAAAAGACAAGCCACTGAATTAAGTTCAG------GGTAAATAGCAGGG----AAGTGGTTTTTATA-AACACGGTATCACCCAAAACACCAT--------------------------------------------------TCCCACTAATAAGTGATAAATTTGTTTAGCATTTTACAAGACCAAAGTAGAAAAGTAAAGCTTCTAGAAAGATGTAGCA----------CAGAAAAGCCTCCCCCTT---CCTTTA--------TCAGGATCC--------ACAATTTTTA--------------------------AAGGAATAGAAAATCA---AATCCTCAATACTTGAAAGGGAACTCTAAAAAGGACCCAGGGG-------AGAAAAAGAGGTACCGAAATTACCAAATTGGAGGGCAAACTTC-TTTTATACTGTAAAAGCATACAACCTAGCCAGGCATCCATAGGGCC-ATTAAGCGGATGAGTGGGAAGGCAGGGACGGATGAGGCTGCAGTAGTCGAAAGCCTGAATGAATTCTC--TGCCTGCGTATTTTCCAATGAAGCTGAAGGTCACGTCCCGGAAAC-TGGATACATTTTCTTGAGGGG-----AAAAGTGGAATGTTAAAAGGATTTTATGATCACACAAGAGTAGATAGTTGAGCAATTAGAACTATTAAAAGTTGACAGGGCACAAGACCCAGATTAAGTACGTCATAGAAATCTTAAAGAAGTGGAAAGGAAACAGGAAATGCCTTCAGCAGCATTTCTTGATAGCTTGTTCAGAAGG chr4 - 94230402 53878378 53878377 53879599 40350804 40350803 40352025 1222 CGCATATATGGAGCAAAACATGTAAAAGACCACAGCAGTGAGGGTGGGAAAGTTTAATTATCTAGACCTCAGAGTGGATTACATTAAGAGGAGGAAGCAAAGCTTGATCTGGTACAGGACTGCTTTCTAATTTAATGTGTACATAAACCGACAAGGAAGGGAAGAATGCCAGATGTGGTATTAAGCAACACAGAGAATATGATTTAGGACATTAAGGTATAAAAAAAAAGGTAGGAATAGTGACTGCTAAGCTAAAATAGCTCCTGTAGTGCCTCTCTACCCCATTTACACTGTGTTTGCACCCGGCAAAAGAGCACTGAGCAAGGAAATGCACCAAGGTGCCACTGAAAACCCTAGCATAGTCACACAGAAATAGCAATCTTCTAGGAAGAAAAAGGAATTTACTTCAGAACAAGGAGCAGAATTTCTATTTTCTTGAGGAAATCCAAG---CTCAACCAAGCTCGGTGTTCTGGCGAGTTTCAGATTTCCCAGTGATTGCTCTACAAAACGCTGGAGCTCCAAGCACTAGGCAGCCTTGCGGCTACACCACGCTGAAAGCCCCAGGTTATTTCTGAGCTATTCCACAGACAGG-GGTGGGTTCTGCTCTCATTCCA------CACACTGTAAAATTGGAGCTGCTTCCA--CTTCAGCATATCCAGTTCCAGACAAGCCCACCATTTGGGCCCATACCGTGGTTTCAGTTTCCTCTACTGTATTATTATTATATTACTTAGCAGGTCTGCTGATGACATTGCATTCAAAATTGGGCAATTATAAACAC-TGGCAGGAAACTCTGGAGTAG---CAAATGCTTTTTAAAAAAAAATGGCAAGGATGTGAAGAAATTCAATGGAGATTTTCATTTGATATATTAAAAGCACACGACCATGGAAGGAACTTGTGGGGCTGAGAGAGGGTATGAGTGAGAAGTCAGTGACAGATGAGACTGATGCAGCAATGAGCCTGAATTAATATTCGATGCCCGAGTATTTACAGAAGAAGCTGAAGGTCACATCCCAGAAACAAGGATACATTTTCTTGTGGGGAAAAAAAAAATGAAACGTTAAAAGG-CTTTATGATCCAATCTGGACAGGTAGATAGTTAATTAGAACTATTAAAAGTTGACAGGACCCAAGACGTAGATTAACTGCATCTCACGATTTGGAAGGAAATAGCAAGGGAAATTGGAAAACCTGTAGTAATACTGCTTGATAGCTTCCTGAGGAAG .....:x.::......:.------....:x..x:.:...:.x:....:.:.x...........x.x.x.x:x.xx.........:...x........::.:...x........:..:::...x.....................x.x....x....:...:........:..:.x.:.x.....::..:.:--------------------...:...x:...::.:.:x:......--------..::x.x.x....----------------------.:....x.xxx.:..x..xx.:..x:x.x.::...------------------:x:.....::----------------...xx...x::.::x..------.x........x...:x..----------..:.x:.x::.x...---:...xx:.:::::...xx....---..x..::...:..:.------..::.:.xx...:x----x....:..x:.x..-..x...x.:xx:.:.x..:...:.x--------------------------------------------------.:....x:.:.:.-.:.:::..:xx:.xx....::.------..x.x.:x....x.::....x..xxx.--x.x:....----------....x.....:x..x:..---..:x..--------....xx...--------.:x...x...--------------------------.xx.x..xx.....::---...:x.x..:..-..:x...:......::.:x:.---..::x.-------.:.....:x..:.xx..x:.x.xx.....x:.x..x:.x:...-...x...:xx........:..:...xx.xx...x.::::.:....:-.xx:..x.x.......:....x...x...:......:...xx.:..:x:x:.........x...x:..--....:.x......x.x:.x...............:....:.....-x...............x....-----....:..:..:.........-:.........xx.:xx.:::..:...x.::x:..........................:.x......x:.......x.:.:..x:.x:.x.:xx..:...:.:.x....:..xxx.:..x:...x:..:.::.:.x...........x:.x..:.:. 18M6I167M20I26M8I13M22I35M18I10M16I17M6I18M10I15M3I22M3D15M6I14M4I14M1I25M50I13M1D22M6D27M2D8M10I18M3I6M8I9M8I10M26I16M3I12M1D21M3D6M7I43M1I46M1I68M2I45M1I21M5I20M1D157M 648/977 66.3% 1222/94230402 0.0% 262/977 26.8% 50714000 NA +3848 chr4 + 190214555 104601891 104601890 104602051 161 TGGTACTCTTTTCCTTCC-TTCCTTCCTTCCCTTTGTTTCTCTTTCTCTCTTTCTT-TCTTTTCCTTCCTTCCTCCCTCCCTCCCTCCTTTTCTTTCTCTTTCTTTCTTTTCTTTTTTCTCTTC----TTTTTCTT---TATTTCTTCCTTTCTTTCTTTTCTTTCTTTC chr4 - 94230402 34857688 34857687 34857853 59372550 59372549 59372715 166 TGTTATTATTTTCCTTTTATTACTTAC--CCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCC--CCTCGCATTACTTTCTCCC ..x..:.x........::-..x...x.--..:...:..x..x...::.::...x..-.:....:.....::....x.:...::.x.:x..x.:x..x.:....:..:.x..x..:x..x::...----......:.---....x.....--:..:x.x..x......::. 18M1I8M2D27M1I67M4I8M3I10M2D19M 107/157 68.2% 166/94230402 0.0% 13/157 8.3% 69744203 NA +3281 chr4 + 190214555 104601975 104601974 104602120 146 CCTTTTCTTTCTCTTTCTTTCTTTTCTTTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCTCTCCTCTCCTCTCCTCTCCTTTCCTT chr4 - 94230402 9693690 9693689 9693835 84536568 84536567 84536713 146 CCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ....:.:xx......:..::.xx.:.:..:.x:.:x.....:....x.x.x....xx:.x:.xx....x:.x.x.xx:..::.::::..::..x:.:....:.:...x:...:.x:..:.x.:x.:.::.::::..:.:..:.... 146M 80/146 54.8% 146/94230402 0.0% 0/146 0.0% 94908285 NA +4439 chr4 + 190214555 104602001 104602000 104602160 160 TTTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCTCTCCTCTCCTC-TCCTCTCCTTTCCTTTCCTTTCCTTCCTCCTCTCCTCTCCTCTCCTCTCCTCCTT chr4 - 94230402 45185593 45185592 45185743 49044660 49044659 49044810 151 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTT----------CATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ....::......:.xx...:x:...::.x...----------.x................x.:...:::....:.::.......xx:.::.:.::.:...x.:.x-.x..:::.x:.x...x:.....:xx..x..:..xx....:.x.:..:.:...:.. 32M10D63M1I55M 96/150 64.0% 151/94230402 0.0% 11/150 7.3% 59416408 NA +3272 chr4 + 190214555 104602002 104602001 104602094 93 TTTTTCTCTTCTTTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTTCTTTTC--------------TTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTTTCTTCT chr4 - 94230402 3338200 3338199 3338306 90892097 90892096 90892203 107 TTTTTTCCTTTGCTATCTTTGCTTCCTGCTTCTTTTCTTTCCTTTCTTGCTTTTCAAACCTGATGCATATTACTTATTTTTTGCTTTGATTATTCTATTTTCCTTTT .....::...:x:.x.....::...:.x...::.......:.......x......--------------..x...x....x.x:...xx..x.::.x.:..:...:. 55M14I38M 65/93 69.9% 107/94230402 0.0% 14/93 15.1% 101263802 88950753 +3237 chr4 + 190214555 104602004 104602003 104602082 79 TTTCTCTTCTTT----TTCTTTATTT-CTTCCTTTCTTTCTTTTCTTTCTTTCTTTTCTTTCTTCTTTTGTCTTTTTCTTTTCT chr4 - 94230402 51567322 51567321 51567405 42662998 42662997 42663081 84 TTTATCTACTCTCAAGTTCTTTGTTTACATTCTTTCTGTTGATTCTTTTTTTTTTTGCTTTTTTCTTTTATCCCTATATTTTCT ...x...x..:.----......:...-.x.:......x.:xx......:...:...x....:.......:..::.x.x...... 12M4I10M1I57M 60/79 75.9% 84/94230402 0.0% 5/79 6.3% 53034682 NA +3076 chr4 + 190214555 104602014 104602013 104602103 90 TTTTCTTTATTTCTTCCTTTCTTTCTTTTCTTTCTTT-CTTTTCTTTCTTCTTTTGTCTTTTTCTTTTCTTTTCTT--TCTTCTCTCCTCTCC chr4 - 94230402 8439370 8439369 8439461 85790942 85790941 85791033 92 TCTTCTGGGTTTCTCCCCAT-GTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTTC .:....xx:.....:..:x.-x....x....::....-.::::..::.:......x.......:.......:.:..--...xx...:....:. 20M1D16M1I38M2I15M 63/89 70.8% 92/94230402 0.0% 4/89 4.5% 96162644 94051911 +3429 chr4 + 190214555 104604538 104604537 104604617 80 ATATATATACATATATATGTGTGTGTGTATATATACATATATATATATGTGTGTGTATATATATACACACATATATGTGT chr4 - 94230402 40224636 40224635 40224715 54005688 54005687 54005767 80 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ...:x.........:..xx.x.x....:.xxx:x...x..x.x.:.:...........:......:.x.:.:........ 80M 57/80 71.2% 80/94230402 0.0% 0/80 0.0% 64379902 NA +3295 chr4 + 190214555 104604552 104604551 104604632 81 ATATGTGTGTGTGTATATATACATATATATATATGTGTGTGTATATAT--ATACACACATATATGTGTATATATATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.....:.....::...x....:...x..:..:...:..:x..:..--.........:.:.:::::.x.:.:.x..:x... 48M2I33M 55/81 67.9% 83/94230402 0.0% 2/81 2.5% 96208764 94005791 +3298 chr4 + 190214555 104604555 104604554 104604602 48 TGTGTGTGTGTATATATACATATATATATATGTGTGTGTATATATATA chr4 - 94230402 66471242 66471241 66471289 27759114 27759113 27759161 48 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATA ......:.......:..:......:.:........x....x...:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 38133313 NA +3420 chr4 + 190214555 104623593 104623592 104623688 96 TTGAGAACAGGGATGTCCAATCTTTTGGCTTCCCTAGGCCACATTGGAAGAGGAAGGATTGTCTTGGGCCACAGATAAAA----TACACTAACACTAATG chr4 - 94230402 9885850 9885849 9885949 84344454 84344453 84344553 100 TTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg ....:xx....:x.:.....:...:..x.......::......x..::x..:x.:.:...::..x....::..xx...:.----.:.x..:.x.x..... 80M4I16M 64/96 66.7% 100/94230402 0.0% 4/96 4.2% 94737743 NA +3667 chr4 + 190214555 104654887 104654886 104654985 99 TTTCTACTAGTACAATATGGCAAAAAACAAAAAAAAAATGAAAAAGAAGGAAGGGACAGGGAGAGAGATACAGAGAGAGAAAAAGAGAGAGCAAGAGAA chr4 - 94230402 40472525 40472524 40472619 53757784 53757783 53757878 95 TTTCGACATGTACTGTGGGGGAAAAAA-AAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGG---AAGAGAA ....x..xx....x:.:x..x......-..:.......x......:.....:...:x:...:.:.:...x:.::::.x........x:.---....... 27M1D61M3D7M 68/95 71.6% 95/94230402 0.0% 4/95 4.2% 64182362 NA +14294 chr4 + 190214555 104747936 104747935 104748281 346 AGACATTTATAAAAGAGTAAATGGTCAAAAATGACTCAAAATATATAATGTATGTCATAG---CAGGTGTATA--AGAAATAAAGTTTGCCAAACTGCACTGAAA-TTTACTCCATGACAAGAGCAGTGCATTTTCTCCATGGCTGTCATAGATTTCATGGATCCTGAGAAATCCAGCCATTTTTAGAAATCCCATGAAATTTACCTTTTCACTCGAATCCACATGAAATCAAAATTTTTCCCTACGAGTCCCCATAAAATTGGCACATTTCCTCAGAAGACCCCATGAAATTATAAAGAATATTGCAGATTCTTTGCTTCTAGC-CCTTGTTGCACATCTTAAAGAAACAGG chr4 - 94230402 53905467 53905466 53905803 40324600 40324599 40324936 337 AGAGACTAGAAGATGAGGAAGAGGTCCAGAATG-CTCA--------------TGTCAGAGGCACAGATGTACACAGAAAAGAAAGTTCTGCAGACCACAATAAAAATTTACTCCATGGTGAGAACTGTGCATTTT-TCCATGGCTGTCACAGATTTCATGGAACTCGAGAAATCCACCCAATCTTAGAAATCCCAAGAAATTTATCTTTTCACCCGAATCCACATAAAATCAGATTTTTTCCATAAGAGCTCCCATAAAATTGTGCTACTTCCCTAGCAGATCCTGTGCAATTATGTAGAATGCTGCCACTTCTTTGAGCCCAGTGTCTCACTGCACGTCGCAAAACAATGAG ...x.:.x:x.:.x...x..:x....x.:....-....--------------.....x..---...:....:.--::...x......:xx..:..::..x.:...-...........:::...:.x.........-.............:............x.::..........x...x.:............x........:........:...........:......:.x.......x..x...::............xxx:.:....::..x...:..::..x......:x.....::...x:x.......xx:.:..:-:..:::.....:..x:...:x..:::. 33M1D4M14D8M3I10M2I30M1I29M1D189M1I27M 246/330 74.5% 337/94230402 0.0% 23/330 7.0% 50842469 NA +16451 chr4 + 190214555 104763257 104763256 104763540 284 TAGTTTAAAGACTGAGGAGGCAACTGCTATTTTTGATTGTGCTAACCTGTGCATAATTATGTAATTACCTACTAAAATTTAGTCAGAGTGTTGCATATCTAAATCATTAACTTTAACAATTGACAAGCTGCTTTGATTAGTATTTTCATAGTGTAGGATAACATACTTTTGTCAGCTTTCATATGATTAGTTATGACTGGGAATTTGTTTATGCAAAATGTTTTCATTGCCTGTTTGAAGTAAAAGAGAGGGGGGTGGTGAGGGCAGGGGAGTCCTTTCCCTCC chr4 - 94230402 53911770 53911769 53912047 40318356 40318355 40318633 278 TGATTTCAAGATGGAGCACGCAATAGCTATTTCTGATTGT--TAACCCAGCCGTAATTATGTAATTATCCACAAAAATTTAGTCAGAGTTTTGCATATCTAAATCATTAACTTTAACAATTGACAGGCTGCTTTGATTAGTATTTTCACAGACTAGCATCGCATACATTTGTCAGCTTTCCTATGATTACTTGTAATTTGGAATTTGTTTATGCAAAATGTTTTTATTGCTTGTTTGGAGGGGAGGGAAGGAAAG----GAGGGCAGAGCAGACATGTTTATCC .::...x....:x...x.x....:x.......:.......--.....::xx.:..............:.:..x................x...................................:......................:..xx...x..x:.....x.............x........x..:.:.:.x.........................:.....:......:..x::.:.::...:::.----........:.x..x.x.x.::x... 40M2D213M4D25M 225/278 80.9% 278/94230402 0.0% 6/278 2.2% 50851487 NA +3369 chr4 + 190214555 104797282 104797281 104797451 170 TTTTTATGCTTACTTTTTGTGGCTTCTTTTTCTTGATCCATTTTTACAATGGTTTGCATATTTTACTAAAGTTTCTAACAAATTAGTTTTCATGTTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATACTATTTTAGTTTATAC--GTTGTGCTTTCATCTTG chr4 - 94230402 19559219 19559218 19559364 74671039 74671038 74671184 146 TCTTAATTCTGCTTTGTTGTAACTTATTTAACTTATTCCTTCTTC---------TGCATTTTTAATT---TTTTTTAGCTATTTTTTTTT--------------GTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtggtgggttcacactg .:..x..x..xx:..x....::...x...xx...:x...x.:..:---------.....x...x.:.---x...:..:.x.x..xx....--------------..............:..............:.xx:x.....x..x...x.--..x...xx....:x:.. 45M9D13M3D20M14D49M2I17M 102/144 70.8% 146/94230402 0.0% 28/144 19.4% 85238063 NA +3131 chr4 + 190214555 104797381 104797380 104797430 50 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATACTATTTTAGTTT chr4 - 94230402 89821282 89821281 89821331 4409072 4409071 4409121 50 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCT .........x.x.......................:...x:::.:.:.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 14976099 NA +3777 chr4 + 190214555 104807488 104807487 104807567 80 AAAAACAAAAACAAAAAAAAAACATATAATTTTCTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCT chr4 - 94230402 43675256 43675255 43675335 50555068 50555067 50555147 80 AGAAACAAACACTAAAAGAAAACACATGATCCTTTCTTTTTCCTTTTTTTTTTTTTTCCCCTCCTTGTTAGTTGGCATTT .:.......x..x....:......:..:..::.:.:...:..:..............::::.::..x.x..x:..x:.:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 61132232 NA +3132 chr4 + 190214555 104822778 104822777 104822845 68 ATGAAAGATTACTTTGCATTTGTTTTGTTTTTGTTTG----TTTTTAACCTGGCTTTTTTTTTTTTTTTTTT chr4 - 94230402 26633389 26633388 26633460 67596943 67596942 67597014 72 ATGGAAAGTTACTTGGTTTTGGTTTTGGTTTCGGTTGGCTTTTTTTCTGTTGGGTTTTTTTTTTTTTTTTTT ...:..::......x.:x..x......x...:.x...----.....xxx:...x.................. 37M4I31M 53/68 77.9% 72/94230402 0.0% 4/68 5.9% 78189389 NA +3142 chr4 + 190214555 104828929 104828928 104829048 120 CAAAAA---AAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACACAAATAGACCAAATA----GGCAATTT---TTGCTGTCCGGGGAATGTCCAAGAGGAAGACAAGCACA chr4 - 94230402 52796013 52796012 52796140 41434263 41434262 41434390 128 CAAAAATATAAAGGAAAAGGAAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATA-CCCAGACATTCTGAGAGTCTACCCTGCCTTTTGGAGATTTTCCCGTAGAAAGA-AAACACA ......---...::.x..::......x..x.x.....:.:x:x.x.......:...............-x...:.:.----.:x.:.:.---:...:x.::..:..x.x...x:x..:....-..:.... 6M3I59M1D8M4I8M3I30M1D7M 83/118 70.3% 128/94230402 0.0% 12/118 10.2% 52032916 NA +3447 chr4 + 190214555 104828930 104828929 104828988 59 AAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACAC chr4 - 94230402 52796023 52796022 52796081 41434322 41434321 41434380 59 AAGGAAAAGGAAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATAC ..::....::.x.x..x..........x.:.:..........:...........x.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 52032907 NA +3532 chr4 + 190214555 104828931 104828930 104828992 62 AAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACACAAAT chr4 - 94230402 31707643 31707642 31707703 62522700 62522699 62522760 61 AAAAAATAAACAAAACAACAAAAAAAAAAAACCAACACATACACAAACACCCACA-ACAAGT ......x........x..........x....xx......:.....x....x....-....:. 55M1D6M 52/61 85.2% 61/94230402 0.0% 1/61 1.6% 73121288 NA +3111 chr4 + 190214555 104828932 104828931 104828977 46 AAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACA chr4 - 94230402 65284688 65284687 65284733 28945670 28945669 28945715 46 AGAAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACA .:...........x........x.....x..x....x......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 39544244 NA +3420 chr4 + 190214555 104828932 104828931 104829048 117 AAAAAAAAACAAAAAAACAAAAAAACAAAAAAAACACACACACACACACACACACACAAATAGACCAAATAGGCAATTTTTGCTGTCCGGGGAATGTCCAAGAGGAAGACAAGCACA chr4 - 94230402 52796027 52796026 52796140 41434263 41434262 41434376 114 AAAAGGAAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGACATTCTGAG-AGTCTA-CCCTGCCTTTTGGAGATTTTCCCGTAGAAAGA-AAACACA ....::......x..x.x.....:.x.:....x.....:...........x.:..x..:.:.xx.::.:-..x.x.-:::...:x.::..:..x.x...x:x..:....-..:.... 69M1D6M1D32M1D7M 77/114 67.5% 114/94230402 0.0% 3/114 2.6% 52032905 NA +10981 chr4 + 190214555 104831490 104831489 104831782 293 CTAAAATAGAAACAATGAGAAAA-----TGTCCTATACCTCCAAATTAAATTCAGATGTGGAAAATCTGTGTTTGATACAATAGATTTAAATAA--AATATACTACA--GATGAAATAAACAAGGATTTAGGTATGATAGTCATTTTAGTTGATTACATCATAGTCTGAATTTAGACAGTCTATGATGTTTCCATGGAAACTGTTTTTGCTTAAATGTAGTTTTAGATATTCTTTAAGTACAAATTAAATTAATTGAAGGCAGAGATACAATGTTGGAAACATTTAGGAGCCTAAAGAACAG chr4 - 94230402 53927559 53927558 53927855 40302548 40302547 40302844 297 CTGAAATGGAAGCAAAAAGAAAAAAAAATGTGTTACTGCTCTAAGTTATACTTAGAAGCAGTAAATCTGTGTGTGCTACCACAGATTTAAATACTCAATAAACTACACAGAAGAAATAAACAACTGTTTGAG-GTGACAGTCGTTTCAGTTGTTTACATCATAGACCGCATTTAGAAAAGCTCCAGTGTTACTATGGTAACCACTTTTGCTTAAACGTAGTTGTGGACGCTCTTTAGGTAGGCTCTAAATTAACTGCAGATGGAGGAGTAGCACTGGGGG----GAACAGCCAAAGGAGCAG ..:....:...:...x:......-----...x:..:xx...:..:...x.:.:...x.::.x..........x..x...x.:...........x--....x......--..x...........xx:...::.-:...:....:...:.....x...........x.:.x.......x.:x..x:::....x.:....x...:::...........:......x.:..:::......:...x:xx:........:..x..:::...:x::.::::...:::----x.:x....x..:..:... 23M5I66M2I11M2I23M1D147M4D18M 202/288 70.1% 297/94230402 0.0% 14/288 4.9% 50903931 NA +3179 chr4 + 190214555 104866331 104866330 104866393 63 TGAAATAAATAAATAAATAAATAAATAAATATATATATATATATATATACACACACACACACA chr4 - 94230402 70707577 70707576 70707639 23522764 23522763 23522826 63 TGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ....:x...:.:.x...:.::x...x:..................:.:......::..x.x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 34158754 NA +3146 chr4 + 190214555 104866333 104866332 104866391 59 AAATAAATAA-ATAAATAAATAAATAAATATATATATATATATATATACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAA-AACTCTATATATACACATATATACACACACACACA ...x......-.x...:...:...-..x.x........:.:................... 10M1I13M1D35M 50/58 86.2% 59/94230402 0.0% 2/58 3.4% 43886991 NA +11757 chr4 + 190214555 104877671 104877670 104877944 274 TCACATAAGCATAAACATT------GACTGTTCATGTATATAGGTACCAACATACACATGAATCTAAAAATGTACTTTGAATTGATTCT-GGAGCACTTTTTGAAGTTCAATAAATGCCTTAGAA-TCAGCTGGAAGTCCACAAATGGTAATAGTATTTAGCTCATTTCAATAGAAATTATCTCATTAACATGCCAGCTGCTAAAAATGTATGAGCCCAGCCATGTCCTT-TGCCTGCCTCAAGGAAAGAAACCATGCTTGCA---CGGTTTTGGTTAAAAAAAAA chr4 - 94230402 53943876 53943875 53944152 40286251 40286250 40286527 277 TCAGATAAGCGTAAACGTGACTGCAGAATGTTCTTTGGTCTTCTTTCTATCA--------AATCTGAAAAATTATTTTTAATTGATTCTTGAAGCACTTTTTGAAGTTCAATAAATGCTTCAGAAATCAGTTGGGAGTCCACAAATGTTAATAGTATTTAGCTCATTTCAATAAAAATGGCCTCATTAACATGCCAGCTGCT-GAAATGTGTGATACCAACTGTGTCCTTCTGCCGGCCTGCAGGGAAGCCTTCCCACTCACCACTCAGTTCTGTTTTAAAATAAA ...x......:.....:.x------..x.....x.xx:.x.xxx.x.:.x..--------.....:....xx..:...x..........-.:..........................:.:....-....:...:............x.........................:....x::.....................-:......:...xx...:.::.......-....x....xx...:...xxx:.x::..::.x---.:...:..x..x....x... 19M6I27M8D29M1I35M1I76M1D27M1I32M3I20M 208/265 78.5% 277/94230402 0.0% 21/265 7.9% 50933795 NA +3002 chr4 + 190214555 104914647 104914646 104914685 39 TATGTATGTGTATATACATACATATATACACACACAATG chr4 - 94230402 10898955 10898954 10898993 83331410 83331409 83331448 39 TATGTGTGTATATATATATACACATATACACACATAATG .....:...:......:.....:...........:.... 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 94015692 NA +3076 chr4 + 190214555 104922427 104922426 104922505 79 TGTCCTTTTCTTTAGAGGTTTGTTTTTCAAATAATTGTTTTAATTATCTTCTCTACTTTATAATTTGGAAATCTAGCTT chr4 - 94230402 66532611 66532610 66532689 27697714 27697713 27697792 79 TGTGCTTTTTTTCAAAAGTCAGTTGTAAAAATAATTATTTTCAGTGTCTTCTCATTTTTAAAATTCATAAGCCTTTCTT ...x.....:..:.:.:..:x...x.xx........:....x.x.:.......xx:....x....::x..::..xx... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 38389816 NA +3990 chr4 + 190214555 104924575 104924574 104924668 94 GAATAAACT--ATTGGTTTAAAGGAGGGGTATCCAATCTTTTGGCTTCCCTGAGCTGTATTGTAAGAATAAGAATTATCTTGGGCCACACATAAAA chr4 - 94230402 9885834 9885833 9885929 84344474 84344473 84344569 96 GAAGAAACTTGATTGCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ...x.....--....x..x..xxx...:x.......:...:..x...........:::.x..x:x.....:......:..x....::..:x...:. 9M2I85M 68/94 72.3% 96/94230402 0.0% 2/94 2.1% 95038741 NA +7405 chr4 + 190214555 104928420 104928419 104928658 239 GGAATCCTAATAAAATGCT--TGTAGATGGTCTTTGAGGTCAGTTAAAAATCACCAAATATTTTTGACGGCAATATCTCTAGTACTTGTACCTCTGTTTATCTGTCATTATC-TCAAGTCTTAGTTCCTATTGATTAAATCTA-TTTAGCAACAGTTATAAAATTTTTCTTCTAGATGTGAAATGGCCATAGGGACTCTACTTCCTGGTTAACATGTCTTAATGAATCACCACATTTTCATGT chr4 - 94230402 53953075 53953074 53953316 40277087 40277086 40277328 242 GGAGTGCTCACAAACTCTTCATGAAAATAGCCTTGTAGGCAGGCTGACATCACCCAGATGTTTTTAATTACATCGACTCTGGAACTAATTTCTTTGCTTATCTGTTGCTGCCCTCCAGCACTGGTTCCTGTTGATTAAATCTGCCTCAGAAACAG-AATACAACTTTCCTTCTGGACACAAAATGGCTGGAGATCTTCAGTTTCCTGGTTATTGTGTGTTAATGCTTCACTGCATTTTCACGT ...:.x..x.:...x.x:.--..x.:..:.:...xx...:x:.:.:.x.x:xx...:..:.....:.:x:..x::x....:.x...x:.x:..:..:........:::.::.-..x..:x:.:......:............:-:.:..x.....-x...x..:...:.....:..::::.......::x..:xx:..x::..........x::...x......xx....::........:.. 19M2I91M1I30M1I11M1D87M 154/238 64.7% 242/94230402 0.0% 5/238 2.1% 50975345 NA +3926 chr4 + 190214555 104951901 104951900 104951983 83 CTGCAACCTTCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCTAGTAGCTGGTACTACAGGTGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx.x..:.:...........x...x.xx.x........:..x.........x......x.....--....::.. 73M2D8M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 86754775 NA +3319 chr4 + 190214555 104957059 104957058 104957168 110 TCAAATAACATGATTTTA---TTCTTTTATGGCT----------GAAAAGTATGCCATTTTATATATATATATATATATATATATATATATACACACACACGT----ATATATATATACATATATAT chr4 - 94230402 48166978 48166977 48167104 46063299 46063298 46063425 127 TCATATGACTTGATCCTAAATTTCTTTGCTAGTTCTGTTGAGCAAGATAGTATTGCACCTTGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT ...x..:..x....::..---......xx.:.:.----------::.x.....xx..::..:.......xxx:......:......x.:.....::x...:..----...:.:..:....:..:... 18M3I13M10I59M4I20M 77/110 70.0% 127/94230402 0.0% 17/110 15.5% 56790081 NA +3268 chr4 + 190214555 104957117 104957116 104957179 63 ATATATATATATATATATATACACACACACGTATATATATATACATATATATATACACACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG ...:.x..::...:.x..:..:.:.......:..:....:.x.......:x..::...:.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 97360704 92853851 +3115 chr4 + 190214555 104957146 104957145 104957209 64 CGTATATATATATACATATATATATACACACACGTATATATATATACATATATATATACACACG chr4 - 94230402 7596412 7596411 7596475 86633928 86633927 86633991 64 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG .:..:.x..::.....x..:...........:.:.:....:.x.:.:...:x..:::..:.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 97360734 92853821 +3221 chr4 + 190214555 104957151 104957150 104957270 120 ATATATATACATATATATATACACACACGTATATATATATACATATATATATACACACGTATATATATACATATATATACATATATATACACATATATATACATATATACATATATATAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGT--GTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:.::.:....x.::..::..........x.::::.:.:....::.x..::.:.......x..:.:.--:.::.x.:..x.::::.:....:x..:::.:.x:..:x:..:.:x.::.. 68M2D50M 66/118 55.9% 118/94230402 0.0% 2/118 1.7% 15941069 NA +3307 chr4 + 190214555 104957234 104957233 104957349 116 TATATACACATATATATACATATATACATATATATACACATATATACGTATATATGTATATATATACGTATATATATACGTATATATATGTATATATATGTATATATATGTATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATAC--------ACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::.::.....x:.....:......--------...x.x::..:x...:...:.....x:..:...x:.....:.:x...:.....x:..:::x:.::x.x.:.:.::.:.... 27M8D81M 67/108 62.0% 108/94230402 0.0% 8/108 7.4% 31836132 NA +3052 chr4 + 190214555 104957358 104957357 104957429 72 TATATGTATATATGTATATATATGTGTATATATGTATATATATGTATATATATGTGTATATATGTATATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:...x.....x.::..:..:.:......:..::::.:...:xx.....x.:x.:...:.:...x...... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 52476122 NA +3995 chr4 + 190214555 104957375 104957374 104957472 98 ATATATGTGTATATATGTATATATATGTATATATATGTGTATATATGTATATATATACACACATATATATATACATATATAT---ATATATATATATATAT chr4 - 94230402 68558024 68558023 68558124 25672279 25672278 25672379 101 ATGCATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATATAT ..::..:..:.:.:.x.:..::.....::.:........:....xx...x..x..:..x......:.:..x.x:x.x.x...---.......:........ 82M3I16M 69/98 70.4% 101/94230402 0.0% 3/98 3.1% 36399351 NA +3187 chr4 + 190214555 104968302 104968301 104968400 99 CTTTTTTTTATGTTCTGCTGGACAATGATTACATTTACATAGGGAATAGTATGTAATAAGATGAGGAAACTAAGTCCAAGAAAATTTCAATAATATAAG chr4 - 94230402 33977442 33977441 33977536 60252867 60252866 60252961 95 CTTTTTTTTATGTTTTGCTGGAATATTTTCCCATTAATGTGGAAAAATATATGTAAAGAAATAAGAACACTGGTTTTAAAAAG----CAAAAATGAAAG ..............:.......xx..xx.:x....x.::.:.::..xx:.......x:.:..:..:.x...::x.::..:..:----...x...:x... 83M4D12M 63/95 66.3% 95/94230402 0.0% 4/95 4.2% 70990860 NA +3176 chr4 + 190214555 104970065 104970064 104970132 68 TAACTTTGCCAGTGAAATTTAAAAAACAAAAAACAAAAAACAGCAATGCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18827368 18827367 18827435 75402968 75402967 75403035 68 TAACTTTCCTTGTGAAAATGGAAGGAAAAAACACAAAAGTTGCCACTGATTTCTTTTTTTTTTTTTTT .......x.:x......x.x:..::.x....x......:x::x..x..x...:............... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 86142697 NA +3220 chr4 + 190214555 104970071 104970070 104970144 74 TGCCAGTGAAATTTAAAAAACAAAAAACAAAAAACAGCAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 2095516 2095515 2095589 92134814 92134813 92134887 74 TGTCAGAGACATCCAGCAAACAAAGGGTGAAAAGAGGAAATCTCTTTTTTTTTCTTTTTTTTTTTCTCTCCCTT ..:...x..x..::.:x.......:::::....:x:.x...x::.........:...........:.:.:::.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 102874555 87340000 +3002 chr4 + 190214555 104970079 104970078 104970143 65 AAATTTAAAAAACAAAAAACAAAAAACAGCAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 86453166 86453165 86453230 7777173 7777172 7777237 65 AAATTTCAGGTAAAAAAAAAAAAAAATTGAACTTCTCTTATGTTTCTTCTTCTTTTTTTTTTTTT ......x.::x.x......x......:x.x.x.x..:..x.x...:..:..:............. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 18516913 NA +3046 chr4 + 190214555 104973377 104973376 104973425 49 AAGAACAATAAAACAACAAACAAACAACAACAACAAAAACCAATAGAAA chr4 - 94230402 18903647 18903646 18903695 75326708 75326707 75326756 49 AACACCAACAAAAAAACAAACCAACAACAATAAAAAAAACCAATAGCAA ..x.x...:....x.......x........:..x............x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 86069730 NA +3057 chr4 + 190214555 104973385 104973384 104973425 41 TAAAACAACAAACAAACAACAACAACAAAAACCAATAGAAA chr4 - 94230402 72680393 72680392 72680433 21549970 21549969 21550010 41 TAAAAAAACAAACAAACAACAACAACAAAAAACAATAACAA .....x.........................x.....:x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 32292992 NA +3356 chr4 + 190214555 104987419 104987418 104987510 92 ATGGGGGAAGTTTTTAACCTCCCTTAGCTTCAGCTTGCTAACCTGTAAAACAGGGATAATAGTATCTACCTTATAGGGTTGTTTTAAAGATT chr4 - 94230402 7135884 7135883 7135975 87094428 87094427 87094519 92 ATGGAGTTGGCTTCTAACCTTCCTGTGCTTTAATTTCCTCAACTGTAAAACAGAAAGGACAGCACAGACCTCAAGGGGTAGTAATTAAGGTT ....:.xx:.:..:......:...xx....:.::..x..x.x...........::.x:.:..:.:xx....:.x:....x..xx.x...:.. 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 97851535 92363020 +3110 chr4 + 190214555 104997058 104997057 104997158 101 CCCGTTTTTTAATTTTTTTTCTTTTTTTTTCCTTTTTTTTTTTTTTTTGCTTGCTGATTTATTTCCTTATATATTCTGGATATTAGAACTTTGTCAGATAT chr4 - 94230402 19777994 19777993 19778088 74452315 74452314 74452409 95 CCTGTTATTCTGTTTGGTTTATGTTTGTTTGCTTTTTTTTTTTTTTTTCCCTCCCAATTACTTCATTTATTCACTCATAATATTA------TGTAAAATAT ..:...x..:x:...xx...x.x...x...x.................x.:.x.::...xx..:x:....x:.:..xx:......------...x.:.... 85M6D10M 66/95 69.5% 95/94230402 0.0% 6/95 6.3% 85219064 NA +3008 chr4 + 190214555 104997079 104997078 104997128 50 TTTTTTTTTCCTTTTTTTTTTTTTTTTGCTTGCTGATTTATTTCCTTATA chr4 - 94230402 88122935 88122934 88122984 6107419 6107418 6107468 50 TTTTTTTTTCCTGTTTGTTTCTTTTTTGATTTCTGATTCATTACCTCCTA ............x...x...:.......x..x......:...x...:x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 16874144 NA +3138 chr4 + 190214555 105022395 105022394 105022501 107 CCCTGGGCGCCAGAGGGAAGTATACTCCCCTAAGGGTGAGGGGTTTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGATAGAGTCT chr4 - 94230402 69959997 69959996 69960093 24270310 24270309 24270406 97 CTCTGAGCCCCAGGGATAAG---AGTCCAGTTAGAGTAAAGGCAGCAATCTTGTT-------TTTTTCTTTTTGTTTGTTTGTTTGTTTTTTAATGAACTAGAGTCT .:...:..x....:.:x...---.x...xx.x..:..:.:..xxx:xx.x.....-------.....:.x...................x..xx...:x........ 20M3D32M7D45M 70/97 72.2% 97/94230402 0.0% 10/97 10.3% 35062398 NA +3092 chr4 + 190214555 105022426 105022425 105022491 66 AAGGGTGAGGGGTTTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGA chr4 - 94230402 76034078 76034077 76034143 18196260 18196259 18196325 66 AAAGGTGGTGGTTTGTGTTTTGTTAGGGTTTTTTGTTTGTTTGTTTGTTTTTTAGGGTGGTTTGGA ..:....:x..x..x.x.x.....:x........x...............x..x.xx..x...x.. 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 28988348 NA +3498 chr4 + 190214555 105022434 105022433 105022536 103 GGGGTTTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGATAGAGTCTCACTTTGTCGCCCAGGCTGGAGTACAGTGGGGCAA chr4 - 94230402 60504947 60504946 60505045 33725358 33725357 33725456 99 GGTGGTTTTTGTTGTTGTTGCATTGTTTTTGTTTGTTTGCTTAGTTGTTTATTTTT--AGTAAAGTAAAACTTTTT--TCAATGTTTTATTGCAGTAAGGAAA ..x.x.............x.:x..x..............:..:x......:.....--::..:...xxx.....x.--:.x.x.:.xx.x.:....::..x.. 56M2D18M2D25M 71/99 71.7% 99/94230402 0.0% 4/99 4.0% 44517487 NA +3280 chr4 + 190214555 105022439 105022438 105022479 41 TTTTTGTTGTTGTGGTTTTTTTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 45158858 45158857 45158898 49071505 49071504 49071545 41 TTTTTGTGGTTGTGGGCTTTTTTTTGTTTGTTTGTTTGTTT .......x.......x:........................ 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 59863581 NA +10896 chr4 + 190214555 105046301 105046300 105046528 228 TCCCTTGTTAAAAGTGCACAATGTCTGCATGCTAAAACAAATGTGCATTTGAATGCACAATTGATTAACCAATTTTCTAATAATTAAGTTTTTAGATTTTGCATGTGCATTTGTTGCTCATTTGACCACATAATAATTAATTAGCCTTAATTATAATGGATTACACCTTCAAATCCTGCATGCATATTATAATAGAATGACA-GTATTTTACATCACTTTTCATATTTT chr4 - 94230402 53959397 53959396 53959621 40270782 40270781 40271006 225 TTCCTTTTTAAAA-TGCTGAGTGCACGCCTGCTCAGATAAATGTGTATCTGAACACACAGGCGATTATCCTATTTTCATATAATTAATTTTTTGGAGCTTGCATGTGCATTTCCTGCTTGTTTGACCATGTAATAATTAATTAGCATTAATTATATTAGATTGCACCTTCAGAGCCTACACACACATTCAATTAGGAAGGCAGGCTTTTTACAGCAC---TCCTATTTT .:....x......-...xx.:..:x:..x....x.:.:.......:..:....::....:x:.....x..x......xx........x.....:..x:..............x:....::........::...............x.........x.:....:........:.x...:..::..:...xx.x...:.x.:..-.:x.......x...---..x...... 13M1D188M1I14M3D9M 171/224 76.3% 225/94230402 0.0% 5/224 2.2% 51086904 NA +3255 chr4 + 190214555 105047298 105047297 105047359 62 GCCTCCGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTAGAATTACAGGTGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.:.......::x...x.xx.x........::::.......:...:....x...... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 86850160 NA +3081 chr4 + 190214555 105052112 105052111 105052177 66 GGATGGAGGAAATTTTACCAAGCAACTGAAAAACAGAAAAAAGCAGGAATTGCAATCCTAGTTTCC chr4 - 94230402 21745610 21745609 21745675 72484728 72484727 72484793 66 GAACAGAGGGGATTTTACCCAGTATCTGAAGAACAGAAAAAAGCATTAGCCGTAGGCTAGATTTCC .:.::....::........x..:.x.....:..............xx.:::.:.:x.:x::..... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 83306502 NA +3315 chr4 + 190214555 105084613 105084612 105084736 124 TACACTAAATTTATTTCAAAATTTCTTCAATAATAATCTTAGCTTATTGTAAATTTTTTACTACATAAACATTTTAATTTTT-----CC--AACTTTTTGACTCTTTTTTAATAATATAGCTTAAAACACA chr4 - 94230402 87572819 87572818 87572945 6657458 6657457 6657584 127 TACACTAAATTAGCATAAAACTGTTTTATCTTGTAATATTTGCACACTGTATATTGTATACTGCATGAACATTTTAACCTTTAGTAACCGGAAGCCTTCAATTATTACATAAT----TAACCTAAAACACA ...........x::x.x...x.x.:..xxx.x:....x..x..x:.:....x...x.x....:...:..........::...-----..--..x::..::.:.x..x:x....----..:.:......... 82M5I2M2I22M4D14M 83/120 69.2% 127/94230402 0.0% 11/120 9.2% 17511794 NA +3055 chr4 + 190214555 105111244 105111243 105111287 44 ATAAAAAATTTAAAAAAAAAAAAAAAAGAAAGAAACTGTATTCA chr4 - 94230402 9054905 9054904 9054948 85175455 85175454 85175498 44 ATAGGGAGCTTAAAAAAAAAAAAAAGAGAAAGAAATTGTATTTA ...:::.::................:.........:......:. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 96056339 94158216 +3118 chr4 + 190214555 105123573 105123572 105123632 60 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATAAAGTGTCTTCTACTTGTCA chr4 - 94230402 40483193 40483192 40483252 53747151 53747150 53747210 60 TTGAAAGAATGGGAAAAAAAAAAAAAAAAAAGAGAGAAATAGATTGGGTCCTATTTGGCA .::...:..x:::....................:.:.....:.x..xx.:...:...x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 64640380 NA +8738 chr4 + 190214555 105146616 105146615 105146988 373 GGGCGGAGCGGGAGGAGGCCGGGGCGGAGCAGGAGGAGGCCCGGGCGGAGGAGGAGAGCCGGCGGTAGCGGC---AGTGGCAGCGGCGAGAGCTTGGGCGGCCGCCGCCGCCTCCTCGCGAGCG----CCGCG--CGCCCGGGTCCCGCTCGCATGCAAGTCACGTCCGCCCCCTCGGCGCGGCCGCCCCGAGACGCCGGCCCCGC-TGAGTGATGAGAACAGACGTCAAACTGCCTTATGAATATTGATGCGGAGGCTAGGCTGCTTTCGTAGAGAAGCAGAAGGAAGCAAGATGGCTGCCCTTTAGGATTTGTTAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACGAGGTCAGAGCG chr4 - 94230402 53964069 53964068 53964426 40265977 40265976 40266334 358 gggggggggggggggaaggcgagaggaggaaagaaaaag----aaagaaagagaaaagcagcaagagGCGTTTCAAAGAGAAGCGCAGAGCGGCTGCACggcgg--ggcggcgctcggcgggcgggggccgggggcgctcggg--ctgcgcggggtcggggcgcgggcgt----gcggcgcgg------------ggcggcgcggcgcgcggggcgggcgccgacgtcagggcgccgcgtgCATATTGATGCGGGGGCCCGGCCGCTTTCGTCAAGGAGCAGAAGGAAGCAAGATGGCGGCCCTGTAGGAGCGGGGAGCGCGGCG-CCCGGCTGTGCGTGCTGGATGTCGGCAAGGCTGAGGGACGCGGCGGAGGTCAGAgcg ...x..:.x...:...:.x..:.:x.::.x.:..::.:.----::x.:.:...:.:...x.xx:.x:...x:---.:x:.x....xx...x.x:..x:....x.--.x..x.x.::x...:...----...x.--...:....--.:..x..x:xx.::.x.:..xx..:----x........------------.x....x.x..-:.x.x.::.:.x:.x.......::x:...x::..x............:...:x...:........x:..:.....................x.....x.....x:x.xx..x:x..x.-....:...::xx........xx.x................x.:xx............ 39M4D29M3I29M2D18M4I5M2I8M2D25M4D9M12D11M1I118M1D57M 232/348 66.7% 358/94230402 0.0% 35/348 10.1% 51182547 NA +9499 chr4 + 190214555 105150595 105150594 105150958 364 AGCCAACTTTACAATTGGAGCCTTCACT--GTGGGAAAGA----CCAGTTGCCAAGTAGAGCTGGTGGTTATCTGGGAAACTGTGCTGAAGAACACAACCACAAATGATTTTGCCA---AATATACAGTATTTACTTGGTCTAGATCTCCAATTTCTATTTCTACTCACTGCCAAAACTGAGTGAATACTGTGACATTATTGAAGGAGGTTATGCAGTACATCTG--TTGGTTTGGTATATAGTAGGAGAGA----------------AGGGTTCCAGGAGGGAAAGGGGAAAGTCAGAGCATGTGAAT-CACTGTGACTACAATCCAAAAA--GAATTATGTATGTC--TGCTATTTCCAGCATTATTTTTGTCCTATATTGTACATTGCAGAGA chr4 - 94230402 53967957 53967956 53968346 40262057 40262056 40262446 390 AGCCAGCTTCGCAACTGGAGCCTGAACGTGGTGGGACAAAGTTGCCAAGTTTCAAGTAGAGTTGGTGGTTATCTTGGAAACAGTGCTGGGGAACACAACCACAAATGATTTTGCCAAATAATATACAGTATTTATTTAGTCCAGCTCTCCGATTGCTGCTAAGGCAGTCAGCCAGCAGC-AGTGAGCGTTGTGACATCACTTTGAAAGGCAGCGTGCTGCTTCTGAAACGGAGTGGGATGTACTATGATTCATTTTTAGTTTTTTTTTAAAGCTGTAGTCTGAACAG-----AGATAAAGCATATGACTGCATCATGGCTGAGAGCCAAAAAGGGAATTATATGAATCAATCACACTTGCAGCATTTTTCCGATCTCATTCTCCATAAGGCAGTGA .....:...::...:........xx..x--......x.:.----...:x.x:.........:............x......x......::..........................---...............:..:...:..x.....:...x..::.xxx:.xxx.x....:x.x:-.....::::........:.:.xx:::...:x::.::x.:.x....--x:..xx...x..:..x..x..xxx.----------------.::.:.x:..xxx.:.x..-----..x:.:.....:...x.-..:::..:..:x:.x.......--.......:.:x:..--.xx:.:..x.......x..::x:..::..x:.x:.:.xx....x.. 28M2I10M4I72M3I60M1D45M2I25M16I19M5D17M1I22M2I14M2I46M 242/358 67.6% 390/94230402 0.0% 38/358 10.6% 51182638 NA +3451 chr4 + 190214555 105153572 105153571 105153671 100 TCACAACCCTAGAGATAGGT-----ATTATTCTTATCCCTATTT-ATGAGTGAGGAAACTGAAGCCCAGTGAGGTTAAATAACTTCCTTAAGTTCATACAGCCTAT chr4 - 94230402 15193191 15193190 15193296 79037107 79037106 79037212 106 TCAAAGCACTTTGGAAAGGTGGAAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGT ...x.:.x..xx:..x....-----..:...x..x...x:....-..:xx..::.:..:....:.:...xx.::.x...........:....x.........:.:. 20M5I19M1I61M 70/100 70.0% 106/94230402 0.0% 6/100 6.0% 89960381 NA +3004 chr4 + 190214555 105168537 105168536 105168579 43 GAACTCTGACTATTGACCTTGCTTTATTTTCTCTCTTTTTTTT chr4 - 94230402 92034968 92034967 92035010 2195393 2195392 2195435 43 GAACTTTTACTAATGATCTTGTTTTATTTTCTCTCTTGTTTTT .....:.x....x...:....:...............x..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 13133569 NA +5113 chr4 + 190214555 105179596 105179595 105179750 155 TCTTCATTTGGGAAATGAGTGCTTATAATAGAAAGTAATTTGTAGTC-------------AGCTGTTACACTTAGATGATTTGTGTCACCTCTGACCTGCTTTCTGATAATGCATGACTTCATTCATGGCTCTCTAGGTGACCTGTGT--ACCCTGACCTGGCATAAACC chr4 - 94230402 53988886 53988885 53989041 40241362 40241361 40241517 156 TCCTTCTTCGGGAAATGGGTACTTGTAATAGAAAGTTATTTTTAGTCCCTCTGCTTCAGGAGCTGATACACAGAG--------------CCCTGACCTGCCTGCTGATAACGCATTACCTCATTTGCAGCTCTGCTGCTGACGCGCACTAGCCGTGTCCTTGTCTGAACC ..:.:x..:........:..:...:...........x....x.....-------------.....x.....xx..--------------.:.........:.x.......:....x..:.....::::.....x:x.x....x:.:::--:..x..x...x.:x.:.... 47M13I15M14D59M2I20M 103/141 73.0% 156/94230402 0.0% 29/141 20.6% 51190710 NA +3013 chr4 + 190214555 105204198 105204197 105204266 69 AAAAAACAAAAACAAACCAAAAAAAAAAAAAATATATACACACACACACACACACACACACACACACAC chr4 - 94230402 60979346 60979345 60979409 33250994 33250993 33251057 64 AAATAATAAAAACAAAC-----AAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ...x..:..........-----.....xxxx...........:.:.:.............x.x.x.x.. 17M5D47M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 44224852 NA +3363 chr4 + 190214555 105204209 105204208 105204283 75 ACAAACCA---AAAAAAAAAAAAATATATACACACACACACACACACACACACACACACACACATACATACATACATT chr4 - 94230402 87372717 87372716 87372794 6857609 6857608 6857686 78 ACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATT ...:..:.---..:.:.......x...x.x..x...........x.........:x:.:..::..::.:::...:... 8M3I67M 54/75 72.0% 78/94230402 0.0% 3/75 4.0% 17831492 NA +3117 chr4 + 190214555 105204219 105204218 105204282 64 AAAAAAAAAAATATATACACACACACACACACACACACACACACACACACATACATACATACAT chr4 - 94230402 87372728 87372727 87372791 6857612 6857611 6857675 64 AAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATAT ..:.:......xx...x:x..x...........x.........:x:.:..:..::...:..:.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 17831491 NA +7249 chr4 + 190214555 105215571 105215570 105215885 315 TTTAGAGTTTTGAAAGTATTTTGAAAAAAGAAACAG--AAAGGAATAC-AACATTTTTCCCAGCACTGCTTCAATAATGCAGTCTTCAGCATCA----------TCTCAAAGCAATAACTGCAGTACAGATGAGATCAGCCAGTTTTTTTTTCCCCCTT-------ATCTGCAGTGATTTTACCATCTCTTCATGCTACATCTTACCACAAAGA-GAACATTGAAACATGGGAAAGAGTTTGCTTTGATTT----------------CAACCAGAATGCCAACTCATTTCTGGGGTTCTAAACCATAACCTTTTTTAGCAGAGCAGTGTAGAATTTTTATACGATACCATAA chr4 - 94230402 54001163 54001162 54001506 40228897 40228896 40229240 344 TTCAAAGCTTTGAAAATATTTGAAAAGGAACGACAGGGAGAGGAGTGTTGAAGTTCCCTTTAGGACTGTTCAAATACCGCTCTTCCAAGCGTCAGCTGCGTGTATCTGAAGGTCTTAACAAGAGTTAAAACACAATCTGCTGGGTTTTTTCCCTCTCTTTCAGCTTGGCGGCAGTGAATTTTCTGTCTCTTCATGTTGCATCTTGCCATAAAGAGGAAAATTTAAACAGGAGAAAGAATGTGCTTTGAATTATTGGAAATTAAAGGAAAGTGGGAACAGCAGCTCG-TTCTGGCACTCCA------GCCCTTTCTCAGTACAGTAAT-CCCAATTTTTATGCAATCCTATAA ..:.:..:.......:.....x:...::.:x:....--.:....:.::-:.x:..::::::..x....:.:x....x:..xx.:::x...:...----------...x..:.:xx....x:x...xx.:.::x:...x..::.x......::.:.:...-------:x.x.......x...x.::..........:.:......:...:.....-...x...x.....x.:......:.x........x..----------------x.::x:...::x..:...:-......x::..:.------:x.....:.:..:.x..:.:.-:xx.........:.:..x.:.... 36M2I10M1I45M10I55M7I48M1I36M16I19M1D13M6D21M1D24M 200/307 65.1% 344/94230402 0.0% 45/307 14.7% 51214408 NA +16129 chr4 + 190214555 105224234 105224233 105224494 261 TATGTGGTGAGAGATACAGCTACCATTCTTGA---GTAATCCGAAGAGTCAAATGGTATGGAGCAAAATTACAGTCCTAAATGCATATTGGTGAAATGAGATGCTGATCCATTTGCACACTAATGTGCTATTTTTAAGTCATGCATCATAGCATCTTCAAAGAGGCCTGTCATAATTATGATGGATTAGACTGCAGAGTCAGTCCTAGATGCAGTAATTGTTTCACAGATGCTGCCAATGCGACTAGAATTTATAATAAATTAT chr4 - 94230402 54007702 54007701 54007963 40222440 40222439 40222701 262 TATGTGGGGAGAAATAAATGTAT-GTACGTGGCTTGTATTTGAGAAAGTCAAGCAGCGGTGGACTGAATTATAA-CCTGAATGCATATCAGTGGAATGAGATGCTGATCCATTTGCACAGTAATGTGCTATATTTAAGTCACGCATCATGGCATCTTCAAAGAGGCCAGTCATAATTATGATGGATTAGACTGCAGAGTCAGTCCTAGATGCAGTAATTGTTTCACAGATGCTGCTGATGTGACTTGAATTTCTAATGAATTAT .......x....:...x.xx..:-:.x.x..:---...x.:x::.:......:::.::xx.::.x:.....:.:-...:.........::...:.........................x...........x.........:.......:.................x...................................................................::...:....x......x....:...... 23M1D8M3I39M1D189M 215/259 83.0% 262/94230402 0.0% 5/259 1.9% 51216532 NA +113187 chr4 + 190214555 105233881 105233880 105237411 3531 TTTCCATGCTCTTTAGAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCC---CATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAATACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATGGAGGAATAAAACGCACAGTTAGTGAACCTTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAGAATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAAGATTTCACCAGTTTTTCAACACATAACTGCAGTGGGCCTGAAAATCCA---GAGCTTCAGATTCTGAATGAGCAGGAGGGGAAAAGTGCTAATTACCATGACAAGAACATTGT---ATTACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCTTCCGTGGAACACACACATGGTGAACTCCTGGAAAAAACACTGTCTCAATATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAACCACATCTCACATAAATGCCATTAACAGTCAGGCTACTAATGAGTTGTCCTGTGAGATCACTCACCCATCGCATACCTCAGGGCAGATCAATTCCGCACAGACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGATGCTGATAATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTTCCTTTCAGAAACCAGA---ACAACTACAACAACAAAAATCAGTTTTTGAGATATGCCCATCTCCTGCAGAAAATAA---CATCCAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAATGAAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGTTCACTAAGGATTCCTTTTCTGCCACTACCACACCACCACCACCATCACAATTGCTTCTTTCTCCCCCTCCTCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACTCTGAATGGTGGAGTTTTAGAAGAACACCACCACTACCCCAACCAAAGTAACACAACACTTTTAAGGGAAGTGAAAATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCTAA--TCCATCTACACATGTATGCAGC----CCTTCTCCGATGCTTTCTG----------AAAGGCCTCAGAATAATTGTGTGAACAGGAATGACATACAGACTGCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAAA---CAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTGCCCCCAACACAGCACTATCTGAAACCAGGATGGATTGAATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCATCTAAAACGTAATGAGGCATCACTGCCATCAATTCTTCAGTATCAACCCAATCTCTCCAA------TCAAATGACCTCCAAACAATACACTGGAAATTCCAACATGCCTGGGGGGCTCCCAAGGCAAGCTTACACCCAGAAAACAACACAGCTGGAGCACAAGTCACAAATGTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT----CACTGTGTGGCACTAGATTTCATTTTCAACAAAGAGCAGATTCCCAAACTGAAAAACTTAT---GTCCCCAGTGTTGAAACAGCACTTGAATCAACAGGCTTCAGAGACTGAGCCATTTTCAAACTCACACCTTTTGCAACATAAGCCTCATAAACAGGCAGCACAAACACAACCATCCCAGAGTTCACATCTCCCTCAAAACCAGCAACAGCAGCAAAAATTACAAATAAAGAATAAAGAGGAAATACTCCAGACTTTTCCTCACCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGAATGTTTTCATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGGACTGGAGGAAGTACAGAATATAAATCGTAGAAATTCCCCTTATAGTCAGACCATGAAATCAAGTGCATGCAAAATACAGGTTTCTTGTTCAAACAATACACACCTAGTTTCAGAGAATAAAGAACAGACTACACATCCTGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAGTCACAACAAGCTTCAGTTCTACAG---------GGATATAAAAATAG---AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGATACATAACCATGCAAATGTTTTTCCTGTGCCT------GACCAGGGAGGAAGTCACACTCAGACCCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCTAAGGTGGCATCTCTTACAGAAGCAAGAACAGC-AGCAAACACAGCAACCCCAAACTGAGTCTTGCCATAGTCAGATGCACAGGCCAATTAAGGTGGAACCTGGATGCAAGCCACATGCCTGTATGCACACAGCA------CCACCAGAAAACAAAACATGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGAGCAGCAAACAACT---TCTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTTCTGTTCTCAATAATTTTATAGAGTCACCTTCCAAATTACTAGATACTCCTATAAAAAATTTATTGGATACACCTGTCAAGACTCAATATGATTTCCCATCTTGCAGATGTGTAGGTAAGTGCC-AGAAATGTACTGAGACACATGGCGTTTATCCAGAATTAGCAAATTTATCTT chr4 - 94230402 54010899 54010898 54014345 40216058 40216057 40219504 3447 TTTCTTCTCTCTTGCAGATACGTTCAGAGGGCAGCCTTGTGGATGGCCCCGGAGCAGGCCAGATGGAACAGGACAGAACCATCCATGTTGACGGCAATAGATTGAGTCCATTTTTAATATCACAACCTTCTCACATTTGCCAGGCAGACCCTTCTGCAGTGAAGCTACAGAACGGAAGTCCAGCAACAGAGAGGCCTGAGGTCGAAGTCAACGGCAACCACAAGCGGCTGTTCAATAAGAGCAACTACAGAGAGCCCCACGCAAAGGGAAGCCCAAACCACCGCATTAGCCCTGACCTTTTACAAGAGAAGAAAGCATGCTCCATATATATGCAAAATGGTGGGATAAAACGCACTTTTAGTGAGCCCTCTCTGTTTGGACTTCAACAGAGCAAGAAAGTGAAACAAGACAAAGAGGTAAATGGAGAAAAA-----------GCTGAGCCAGAGGATAACT----ATGAAA------CACCAAGCATCTCCAATTGCTACAGTGAGAAGAAATCTGAGA------TGGGACAAGAAAATGAAGCTTTGGAGTTGATGCCGTCAACAAGATACAACAGTGGTGGTTCAGAAGACCCTCGTGAACTCCTGATTCAGGATGAGCAGGAGGGGGAAAACATTAATTGCCACAACAGGGACATTGTCTTACTACTCAAGAACAAGGCGGTGCCAATGCCTAATGGTGCTACAGTTTCTGCCTCTTCCATGGACAGCATGCATGGTGAACTCCTGGAGAAAACACTGTCTCAATATTATCCAGAACATGTTTCCATAGCAATGCAGAAGAACACATCTCATATCAATGCCATTACCAGTCAGGCTACTAATGAGTTGTCCCACGAGACAACGCATTCATCCCATACCTCAGGGCAGATCACTTCCCCACAGACCTCAAACTCTGAGCTGCCTCAAGTGCCAGCTGTAGTGGTTACTGAGGTCTACGGTGCTGATG---------ACTCCAGTAAGCCACCTGTATTGCCAGGTAGCTGTTCACTTCAGAAACCAGAACTACAGCTACAGCAGCAGATTCCAGGCTATGATACACACCGGTTACCTTTAGGAAACAGTGCTGTTCATGGAAGCGTAGGGCAGGTTCCCAATCAAGACCTCTCTCTAAGTTCCAGCAGTAACCTGCAAGCTCAGAATGCTGCATCAGAAAGGTTTTCTGAGCAAGCAGAGAAAAATGGTGCTTTCTTTACACAGAACTCAATGTTTCACAAAGATTCCT--------------------------------CAA----------CTCCTCCTGCTC---------------------------CAGAAATGAACAGTGCACTGTCCGTCATGGTGCGAGAAGGATGCCATTCCTATGACAACAGATGCAATGAAACTCTTCCTGGAGAGATCAAGAACGAAGGGCAACATCAGGGACCAATGCCAGAAAGTCCCGGCCTCAGCCAACA-------GCAACTTCACCCCCAGCAAAGGCTTCCGCAGCAGGTGCAAACGTCGCAGCACAA---AGTCAGCCACAGCGATCCCCGAGCTGCTGCAGCCGCCTCCATTCAGCAGCACCCAGAAGAAATGCCGCCGCCGCCATCAGAGCCTCCCCTCCAAAACCTGCATGCGTGCGGAAGCGATGGTGAGTTGCCTCAACTGTGTCAGCGTTTCCCAGGACAGAGAGAACCTGAGATTCCTCCTGACAAAGAAAAGGACCAAGTGAAAGAGTCTGTGCAACAGCCTCAGCGTTACTCAAAGCCAGCCTGGATAGAATTGGTTTCCACGCCGTTCCGGCAGGGAGAGCTTCCCCACAAGCCAAACGAAGCATTACTGCGATCAATTCTTCAGTACCAGGCAAATACATCCAAAGCAGCTTATATG------AAACAGTATGCTGGAAGTCCTGATGCATTAAAGGGGCCGTCGGGACAGCCCCAGAGCCAGAAGATAATGCAACAAGAACAAATTCCCCTGCAGTACAAAAGCGAGAGCTCCCAGATGCAGCAGCATCCCACAGCTGACCTGCAGCTGCTGTTCCAAAAGCACTCACCGCAGCCACAGCTCACAAAGATGGATTCCCTGCTCAAGTCCCGAGTGCAGCAACACCCTCCACAGCA----GCTCCATTTCCAGCAACAACTTGAACAACAAACTGAACAGCCTTTAGGGGCCCCGCTGAAACAGCAGCACTTGAATCCCCAGCCAGGGGAAAGTGAACAGTTCTTGCATTCACACATTTTGCAACAGATGCTCCAAAAGCAGACACAGCAGACACAGATGCTGTGCAGTCCGCAGCTAACTCCAAACCAGCAACAGGCTC------TGCAAATGAAAAGTAAA---GAACCGCCCCAAACTATTCCCCACTCCCAAAGCAACGCGGAGCAGCAGCCAGACAGGACATCCTTCAGTCAGCCCAAAGCAGATGAGTGCTTTCAAACCGGGAATAAGTACATGAAACCAACCGCATTCCCACTGCATAGCCCTCAGCAAGGGCTAGAGCAGGTACAGAGCATGAACAACAAAACTCCCCTTTACAGCCA------GAAAACAAGCACTGGT---CTGCAGCATCCCTGCCCAAACAACGTGCACTTGATGTCAGAGAAGACGGAGAATGCCGCAAATCTTGAACACTTCGGAGCCAACAAAGCGCGTGACTTGCAACACGTGCAGTATTTCTCAAATAACTTGCCCCCCAAGCAAGATGTGAATCAC---TGTTTTCAAGAGCAAGAGCAACAGACGCAACAAGCTTCAGTTATACAGCTGCCACAAGGCTATGGTGGTAGCCTCAGTCAAGATCCCCCGTGCCAACAGGCCGCACCGATGCCCCAGC---GGTACTTACCGCACAGCCA-GCAAA-----CTCCTGCACACTCACAAGATCAGAGAGGCTGTCATTTGCAGAGCCAAGCCCCAAAGGATTTTCACAAGCACGCTGCTCTAAGGTGGCATCTCTTACAGAAACAGGAGCAACAAGCATAC-CAGCAACCCAAAACCGAGACTGGCGCCGGTGCAGCACGCAAGCCTATAAAAATTGAGGCTGGAGCAAAGTCTAACTTTTGCATGCGTCTGTCAGCTGGGCAGCTGGAAAACAAAATGTGGAAAAAAACAATTAAACAAGAGAATCAGCACTTTGGCTGTGAGAACACACAACAAAAGAGCATCATCGAGACAATGGAACAGCAGCTAAAACAGATACAGGTCAAATCACTGTTTGATCACAAGACTTTTACTGTCAAATCACCTAAACACGTGAAGGTTGAAACAGCAGGCCCTATTACCATCCTATCCAGAAACACCAGTGCTGCAGAATTTGATACTCACACCCCGATCTTAGAACAGCAAGCAAATGTGTCTGCTGAGAAAACCCCGACCAAAAGAACAGCTGGAACTGTTCTCAATAATTTTTTAGACTCACCTTCCAAGTTATTGGATACTCCTGTAAAAAATTTATTGGACACACCTGCCAAAACCCAGTATGATTTCCCATCTTGCAGCTGTGTTGGTAAGTGCTGAGAGATGTACT-AAAGACATAG---TTGTTCACAACAAGAGAACTAGCCTT ....:x:x.....xx::..x.:x::..........................:....:...x............:.......x.........x.....:...:.:........::.:...:..:x....:.---..........:....x...::x..x:::.....x.....:.....:...x::x.x.....:x..x.xx:x.....x..:..x:..xx....:...xx.::xx:..:..:x.:..::..:x:...::::::..........x:..:x::..::.x..:......:..x:......:.:x.:..x:.::....x:.:.x..........x..:...........xx.......:..:.....x.:...:..:.xx....x.......x...........x..:...:x..........:.-----------.x.:.....::::.x..x.----:.....------x.....:::.....:...xxx::::.:....::......x..------.:.xx..........x..:.xx:..x..x.:xxxx.:xx...x.:.:...x.::....x:.x...:.:..x---..:..:.x.....x.:..............:...::::.....:...::...:.:.......---.:....:..:........:....:..................................:....xx:..::.................:..........................x::.........x..::.......:.x.........:..x..........x.........................:::....:x..x..::....x...................x....x..........x................x.:x........:......x.x.....:..::.:........---------.:x.......:.:.x...:.x...:.::..x......x:.............---...:.....:..:..:.xx:...x:.x...x.:.::..x:.:x...x:..:...:.:---::.:..x....x.::.::..x:.:x:.:::.x....x:...x.::.:..........:..::.........xx::..x::xx..x...x...x..:x:.:...:xx..:.x:..........x...:.x:..:.:....:....:xx:..:.......--------------------------------...----------....:...x...---------------------------.....:x:..x..::.x...xx:.x::x:..x:x.....:.::...::x...:xx....x:.x.:..::x...x...::x:.:..::.x..:.xx..:..xx...x.x...x....x:x:.xx.:.....:::--..x::.x...-------...:.----..::.xx.:.x.x:...:.----------...x.:.x...x.:..---x..x.:.x:x.::..:x:x.:::....x.x::.x::xx.::...x::x.::::.x..::...---.:xx:..:x::.....:.x:.:.xxx..x....::.xx::x.x:..x...::...x...:.:.xxx.xxxx..:....:x..xx:::..x.x.:...:.xx.......:xxxx.::x:...x.....x...:::x:...x::.....xx.x:x.x....::..::::..:....xx.....x......:xxx..x.x.xx..:.:x..:.x:..::::.x:.xx..:.xx..:..:....:.....x...............:..:x.x...x:x.....------.:.x...------.....:..::......:.:.::.::::::x::.....:x:.::.:..:x.::.x.x......:.:..::..:.x:..:..x.xx:.x.x:xx....x..:x:..:.xxxx:..::x....:xx..xxx:....:x....x:..x..x.x.........:.x.....xx...x::..x:..x.x..:.::..::x::.:.:x..:x.:.:x......:----.x..x::::...----::.:.....:..:...x:.x:x..x:xx.........x.:.:.x.---.x....:x..xx:x.:.............xx...x.xxx:..:.x...:.x:..:.::x.:......x..........x.x..::..x..:...:..xx:..:.....:x::::x::x...:.:..x..xx...x.............xxx.------.:.....:..:.:....---...x::.:...:...x....:...:...........:xx..x.....:xx...x:.:x...:...::.:...x.:....::..x..:..:.....x:x:.::...x....:x::...:...x..x:...xx:x:x....::x::..:xx:..:..:...x.:.......::..:..:x::.:..x.:...:...:..:..------....x....::.xx.:---x.:...xx.:.:..::.......::::...:.::.x........x.x:..:x.x:.::..x...:.....x:..:.x..xx.....::.x.:x:.......x...:....:.....::.......:x..x:...x.........x.xxx....---..:........:..:.....:x..x.:...............x.....---------..x...::x::...---x.::......x:x:.xx.:.....:..:..:.x:x.xx.:....---.......:x::..:.:...-.....-----:.....::.x:------..:...:....xx....:x:x....x..xxx...x:.....:x:...x.....:.............................:..:..:..:.-....x..-.........x....:...x..x..xx::..xx::::.:..:...x..x..::.x..:x.....xxx...:.xx.:x::..:....::x::x..------.x:.::..........::........:::..:...:..........x:.x:x:x:.......x..::::..:..............:.....x.....:.....x..:..:...x.x..x.:...:..::.:.....:..:...:..:.....x.........xx..:..x..:..:.......::x....x..x:.:..x:.::.:x.:...x.x....x..........:......x:........::::.....:......:...x.---...x.x..:..:..x..:................xxx.................x....x...........:...:.:.........:................:.......:...:..:..:....................x.....x.........:-...:.......-.:.x....:.---..:.:..x..:x..x:..:.x::... 130M3I298M11D19M4D6M6D42M6D71M3I62M3I305M9D52M3I57M3I158M32D3M10D12M27D133M2I10M7D5M4I19M10I16M3D62M3I280M6I7M6D217M4I12M4D45M3I152M6D17M3D200M6D16M3D153M3D48M9I14M3I44M3D19M1D5M5D11M6I94M1I7M1D93M6I270M3I160M1I11M1D10M3D26M 2245/3371 66.6% 3447/94230402 0.0% 236/3371 7.0% 51222982 NA +30167 chr4 + 190214555 105241266 105241265 105241788 523 AAGCTTTGTGGATGTAGCCTTTATATTTAGTATAATTGAGGTCTAAAATAATAATCTTC--TATTATCTCAACAGAGCAAATTATTGAAAAAGATGAAGGTCCTTTTTATACCCATCTAGGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATCATGGAAGAAAGGTAATTAACGCAAAGGCACAGGGCAGATTAACGTTTATCCTTTTGTATATGTCAGAATTTTTCCAGCCTTCACACACAAAGCAGTAAACAATTGTAAATTGAGTAATTATTAGTAGGCTTAGCTATTCTAGGGTTGCCAACACTACACACTGTGCTATTCACCAGAGAGTCACAATATTTGACAGGACTAATAGTCTGCTAGCTGGCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGGCCAGCCAGGCTGCC-AGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTGTCAAAGCAGAAAG chr4 - 94230402 54016367 54016366 54016886 40213517 40213516 40214036 520 AAGCTTTGCAGTGTTACTTTTTTTACATAAAAGAATTAGGCTTCAAAGTAATAACCTTTATTTTGTTTTAAACAGAGCAAATTATTGAAAAAGATGAAGGTCCTTTCTATACCCACCTAGGAGCCGGTCCTAATGTGGCAGCTATTAGAGAAATCATGGAAGAAAGGTAATTAGTGCAAAGGCACAGGGCAGATTAACGTTTATCCTTTTGTGGATGTCAGAATTTTTCCAGCTTTTGCACATAAAGAAATAAACAATTGCAAATCAAGTAATTACTTGTAGGCTTAGCGACTCCAGTGTTGCCAACATGACGCACTGTGCTATTCACCAGAGAGTCACAATATTTGACAGGGCTAATAGTCTGCTGGCTGGCATGGGCTGCGCACTTGGAGACAGGCGCCAGCAAACCCAAGCAGGAACAAGTATGCACCAGC----CTGCCAAGCCAGGCGGT--TGGCAATGGCTGCAGGAACAGGCACAGACCTGGTGTTCCCTCTGCGTGCGAGAATGCCAAGGTGGAAGG ........::.xxx..x::...x..:x..:x.x....::.x.::...:......:...:--.x.xx.:.x....................................:........:........x................................................::.....................................:x...................:..::....:....x.:..........:....::........:.x...........x.:..:..x..........:x..:.......................................:.............:.......::......x.....x.x..::.::.....x.......:...x.....:.x..xx:.....----.....-.....x:x...--.....xx....x..:x:.x...:x.x:x:....:x.....x.:xx:.:xx.:.:..:...:.::...:. 59M2I373M4D5M1I11M2D69M 413/517 79.9% 520/94230402 0.0% 9/517 1.7% 51224899 NA +8707 chr4 + 190214555 105242786 105242785 105242934 149 ATTCATTTGCTAATTGTATGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGCTATTAGGATTGAAAGAGTCATCTATACTGGTAAAGAAGGCAAAAGTTCTCAGGGATGTCCTATTGCTAAGTGGGTAAGTG chr4 - 94230402 54019900 54019899 54020038 40210365 40210364 40210503 139 ATTAATCTGCTTACTAT------GCATATTTTTGT----CTGTTTAAGATTTGGACAGAAGGGTAAAGCTATAAGGATTGAGAGGGTTGTCTACACTGGGAAAGAAGGCAAAAGTTCTCAAGGATGTCCAATTGCTAAATGGGTAAGTG ...x..:....x.:.:.------.::.:...:...----:.x......:.......................x........:..:..::....:.....x....................:........x........:.......... 17M6D12M4D110M 117/139 84.2% 139/94230402 0.0% 10/139 7.2% 51222886 NA +14413 chr4 + 190214555 105243516 105243515 105243796 281 GTTTTGTTTTGGTTGGGG-TGGGGGGTGTTTGGGATGGAATGGTGATCCACGCAGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGCTACTGTGTTTGGTGCGGGAGCGAGCTGGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATCCCGCTGTCTCTGGCTGACAAACTCTACTCGGAGCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTTGAATGAAGAGTAAGTGAAGCCCAGGGC chr4 - 94230402 54021053 54021052 54021326 40209077 40209076 40209350 274 GCTTTGTTTGTGTTGGGGCTCTGGGGTGTGTG--------TTGCTGTGCATGCAGGTAGTCCGCAGAAGCAGTCAGGAGGAAAAGCTGCTCTGCCTGGTGCGTGAGCGAGCGGGCCACACGTGCGAGACGGCGGTGATTGTGATCCTCATCCTGGTTTGGGAGGGAATCCCAACCAGCCTGGCTGACAAGCTCTATTCCGAACTCACCGACACTCTCAGAAAGTACGGCACGCTCACGAACCGGCGCTGCGCCCTCAACGAAGAGTAAGTGACACAGAGGGC .:.......xx.......-.xx.......x..--------.x.:x:.x..:......:..:...........:x:x..:..:.....:..x..::.......x........x........x..:...:.x..:...........:...........x.....:........:x:xxx:...........:.....:..x..:..:.....x..x..x..:..:..............x..:..x..x..:...:.x..:.............x:.xx..... 18M1I13M8D242M 210/273 76.9% 274/94230402 0.0% 9/273 3.3% 51222463 NA +12368 chr4 + 190214555 105259611 105259610 105259804 194 TTTTTCAGGAGAACTTGCGCCTGTCAGGGGCTGGATCCAGAAACCTGTGGTGCCTCCTTCTCTTTTGGTTGTTCATGGAGCATGTACTACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGTTTGTTTAC-TTCCTGATGTATAATCGCTTTATTT chr4 - 94230402 54022114 54022113 54022308 40208095 40208094 40208289 195 TTCTTTAGACGGACTTGTGCTTGTCAAGGGCTGGACCCTGAAACTTGTGGTGCTTCATTTTCCTTTGGTTGCTCCTGGAGCATGTACTACAATGGTTGTAAGTTTGCCAGAAGCAAGATTCCAAGAAAGTTTAAGCTGATGGGGGATGATCCTAAAGAGGTTGGTGTCCATTTCTAAAATGAAAACGCTTCATTT ..:..:..:x.:.....:..:.....:........:..x.....:........:..x..:..:........:..x....................x.......................:.....:............x.x........:..x.........x..x.x.-..:..:.x:.:x..x.....:.... 169M1I25M 159/194 82.0% 195/94230402 0.0% 1/194 0.5% 51237497 NA +6962 chr4 + 190214555 105261755 105261754 105261851 97 ACAGGAAGAGAAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCTGATGCATATAATAATCAGGTA chr4 - 94230402 54024417 54024416 54024513 40205890 40205889 40205986 97 ACAGGAAGAAAAACTAGAATCCCATTTGCAGAATCTGTCAACCCTGATGGCACCCACCTACAAGAAGCTTGCACCTGATGCATATAACAACCAGGTA .........:.....:..:..:........:..:.....x..:..x........x..x..:.....:....................:..:...... 97M 82/97 84.5% 97/94230402 0.0% 0/97 0.0% 51237338 NA +11063 chr4 + 190214555 105269603 105269602 105269756 154 TTTTCAGATTGAATATGAACACAGAGCACCAGAGTGCCGTCTGGGTCTGAAGGAAGGCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACTTCTGTGCTCATGCCCACAGAGACTTGCACAACATGCAGAATGGCAGCACATTGGTAAGTTGG chr4 - 94230402 54027012 54027011 54027165 40203238 40203237 40203391 154 TTCCCAGATCGAGTACGAACACAGAGCGCCCGAGTGTCGCCTGGGTTTAAAAGAAGGTCGCCCATTCTCAGGGGTCACTGCCTGCCTGGACTTCTGCGCCCATGCTCACAGAGACTTGCACAATATGCAGAACGGGAGTACACTGGTAAGTCAG ..::.....:..:..:...........:..x.....:..:......:.:..:.....:..:....................x..::..........:..:.....:.................:........:..x..:...:........::. 154M 127/154 82.5% 154/94230402 0.0% 0/154 0.0% 51242591 NA +20845 chr4 + 190214555 105272552 105272551 105272922 371 CTTCCCTACCAGGTATGCACTCTCACTAGAGAAGACAATCGAGAATTTGGAGGAAAACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATACAAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTACTGAGTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGAAAAGCTTTCCTCCCTGGAGAACAGCTCAAATAAAAATGAAAAGGAAAAGTCAGCCCCATCACGTACAAAACAAA------CTGAAAACGCAAGCCAGGCTAAACAGTTGGCAGGTAA chr4 - 94230402 54029181 54029180 54029557 40200846 40200845 40201222 377 CCTTTCTGACAGGTTTGCACACTAACTAGAGAAGACAATCGTGAAATTGGCCAAACACCTGAAGATGAGCAGCTCCACGTGCTCCCCTTGTACAAAGTCTCTGATGTGGATGAGTTTGGAAGCACTGAAGGCCAGGAGGAGAAGAAGAGGAATGGCAGCATCCAGGTCCTTACCTCCTTTCGTCGGAAAGTAAGGATGTTAGCAGAGCCGGTTAAGACGTGCCGGCAAAGGAAGCTAGAAGCAAAGAAAGCAGCTGCAGAAAAGCTTTCCTCCTTGGAGAATGGGTCTAGCAAAGCTGAAAGAGACAAGTCTGCTGCAGCACGCAACAAACAAGGCAACTCTGAGGCAGCAGGTCATGCAAAGCAGCTAGCAGGTAA .:.::..:x.....x.....x..x.................x...x....xx:..x......:...........:.....x..x..:..:..............:..............:..:::x....x:...........:..:x...:...::x...:.....x..x.x:..:.....x..:.....x.................:..:.....x.....:........:........x........x..x..x...............:.......::.x..x.::...:x.....::..x.....x..:x..x....:.xx......:------....::xx...:.:..x..x..:...:.:........ 334M6I37M 287/371 77.4% 377/94230402 0.0% 6/371 1.6% 51243371 NA +221650 chr4 + 190214555 105274989 105274988 105279827 4839 ATAAAATAATCATCAACATCAAAGATACCTGTTTCTGTTCTCTCTTACCCTGTCCACAGAACTTTTGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCAGCCACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCAGCAGCCACATCACCCTCAGACAGAGTCTGTCAACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCTTCACACACTTCAGATATCTATGGAAGCACCAGCCCTATGAACTTCTATTCCACCTCATCTCAAGCTGCAGGTTCATATTTGAATTCTTCTAATCCCATGAACCCTTACCCTGGGCTTTTGAATCAGAATACCCAATATCCATCATATCAATGCAATGGAAACCTATCAGTGGACAACTGCTCCCCATATCTGGGTTCCTATTCTCCCCAGTCTCAGCCGATGGATCTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAGCTCAGTCTACCACCCATCCATACACTTTACCAGCCAAGGTTTGGAAATAGCCAGAGTTTTACATCTAAATACTTAGGTTATGGAAACCAAAATATGCAGGGAGATGGTTTCAGCAGTTGTACCATTAGACCAAATGTACATCATGTAGGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCCACCTCTAGATTACCACCCAATCTGAGCAATCCAAACATGGACTAT------------AAAAATGGTGAACATCATT---------CACCTTCTCACATAATCCATAACTACAGTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATGCCCTGCATCTCCAAAACAAGGAGAATGACATGCTTTCCCACACAGCTAATGGGTTATCAAAGATGCTTCCAGCTCTTAACCATGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAAATTAAGTGATGCTAATGGTCAGGAAAAGCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCCTGACATTGGGGGAGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCATTGAGTGTGCAAAGCGTGAGCTGCATGCCACAACCCCTTTAAAGAATCCCAATAGGAATCACCCCACCAGGATCTCCCTCGTCTTTTACCAGCATAAGAGCATGAATGAGCCAAAACATGGCTTGGCTCTTTGGGAAGCCAAAATGGCTGAAAAAGCCCGTGAGAAAGAGGAAGAGTGTGAAAAGTATGGCCCAGACTATGTGCCTCAGAAATCCCATGGCAAAAAAGTGAAACGGGAGCCTGCTGAGCCACATGAAACTTCAGAGCCCACTTACCTGCGTTTCATCAAGTCTCTTGCCGAAAGGACCATGTCCGTGACCACAGACTCCACAGTAACTACATCTCCATATGCCTTCACTCGGGTCACAGGGCCTTACAACAGATATATATGATATCACCCCCTTTTGTTGGTTACCTCACTTGAAAAGACCACAACCAACCTGTCAGTAGTATAGTTCTCA---------TGACGTGGGCAGTG--GGGAAAGGTCACAGTATTCATGACAAAT---GTGGTGGGAAAAACCTCAGCTCACCAGCAACAAAAGAGGTTATCTTACCATAGCACTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGGCATCTAGGAA--AAGACCAAAGCATTCTATGCAAAA----AGAAGGTGGGGAAGAAAGTGTTCCGCAATTTACATTTTTAAACACTGGTTCTATTATTGGACGAGATGATATGTAAATGTGATCCCCCCCCCCCGCTTACAACTCTACACATCTGTGACCACTTTTAATAATATCAAGTTTGCATAGTCATGGAACACAAATCAAACA---------------------AGTACTGTAGTATTACAGTGACAGGAATCTTAAAATACCATCTGGTGCTGAATATATGATGTACTGAAATACTGGAATTATGGCTTTTTGAAATGCAGTTTTTACTGTAATCTTA----------ACTTTTATTTATCAAAATAGCTA---CAGGAAAC---ATGAATAG-CAGGAAAACACTGAATTTGTTTGGATGTTCTAAGAA--ATGGTG----CTAAGAAAATGGTGTC-----TTTAATAGCTAAAAATTTAATGCCTTTATATC-ATCAAGATGCTATCAGTGTACTCCAGTGCCCTTGAATAATAGGG-GTACCTTTTCATTCAAGTTTTTATCATAATTACCTATTCTT-ACACAAGCTTAGTTTTTAAAATGTGGACATTTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTG--TAGGACAATAAACGTATATATGTACATATATACACAAACATGTATATGTGCACACACATGTATATGTATAAATATTTTAAATGGTGTTTTAGAAGCACTTTGTCTACCTAAGCTTTGACAACTTGAACAATGCTAAGGTACTGAGATGTTTAAAAAACA-------------------AGTTTACTTTCATTTTAGAATGCAAAGTTGATTTTTTTAAGGAAACAAAGAAAGCTTTTAAAATATTTTTGCTTTTAGCCATGCATCTGCTGATGAGCAATTGTGTCCATTTTTAACACAGCCAGTTAAATCCACCATGGGGCTTACTGGATTCAAGGGAATACGTTAGTCCACAAAACATG---TTTTCTGGTGCTCATCTCACAT-GCTATACTGTAAAACAGTTTTATACAAAATTGTATGACAAGTTCATTGCTCAAAAATGTACAGTTTT-----AAGAATTTTCTATTAACTGCAGGTAATAATTAGCTGCATGCTGCAGACTCAACAAAGCTAGTTCACTGAAGCCTATGCTA-TTTTATGGATC-ATAGGCTCTTCAGAGAACTGAATGGCAGTCTGCCTTTGTGTTGATAATTATGTACATTGTGACGT-TGTCATTTCTTAGCTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGACTGATGCCTGCATAAGATGAAT-AAACAGGGTTAGTTCCATGTGAATCTGTCAGTTAAAAAGAAACAAAAACAGGCAGCTGGTTTGCTGTGGTGGTTTTAAATCATTAATTTGTAT--------AAAGAAGTGAAAGAGTTGTATAGTAAATTAAATTGTAAACAAAAC-TTTTTTAATGCAATGCTTTAGTATTTTAGTACTGTAAAAAAATTAAATATATACATATATATATATATATATATATATATATATATGAGTTTGAAGCAGAATTCACATCATGATGGTGCTACTCAGCCTGCTACAAATATATCATAATGTGAGCTAAGAATTCATT-AAATGTTTGAGTGATGTTCCTACTTGTCATATACCTCAACACTAGTTTGGCAATAGGATATTGAACTGAGAGTGAAAG------CATTGTGTACCATCATTTTTTTCCAAGTCCTTTTTTTTATTGTTAAAAAAAAAAGCATAC-----------------CTTTTTTCAATACTTGATTTCTTAGCAAGTATAACTTGAACTTCAACCTTTTT---------GTTCTAAAAATTCAGGGATATTTCAGCTCATGCTCTCCCTATGCCAACATGTCACCTGTGTTTATGTAAAATTGTTGTAGGTTAATAAATATATTCTTTG-------------------------------------------TCAGGGATTTAACCCTTTTATTTTGAATCCCTTCT---ATTTTACTTGTACATGTGCTGATGTAACTAAAACTAATTTTGTAAATCTGTTGGCTCTTTTTATTGTAAAGAAAAGCATTTTAAAAGTTTGAGGAATCTTTTGACTGTTTCAAGCAGGAAAAAAAAATTACATGAAAATAGAATGCACTGAGTTGATAAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAATGAAGTTTTTTTGATCCTGTAATCACTG--------------AAGGTACATACTCCATGTGGACTTCCCTTAAACAGGCAAACACCTAC-------AGGTATGGTGTGCAACAGATTGTACAATTACATTTTGGCCTAAATACATTTTTGCTTA------------CTAGTATTTAAAATAAATTCTTAATCAGAGGAGGCCTTTGGGTTTTATTGGTCAAATCTTT------GTAAGCTGGCTTTTGTCTTTTTAAAAAATTTCTTGAATTTGTGGTTGTGTCCAAT---TTGCAAACATTTCCAAAAATGTTTGCTTTGCTTACAAACCACATGATTTTAATGTTTTTTGTATACCATAATATCTAGCCCCAAACATTTGATTACTACATGTGCATTGGTGATTTTGATC--ATCCATTCTTAATATTTGATTTCTGTGTCACCTACTGTCATTTGTTAAACTGCTGGCCAACAAGAACAGGAAGTATAGTTTGGGGGGTTGGGGAGAGTTTACATAAGGAAGAGAAGAAATTGAGTGGCATATTGTAAATATCAGATCTATAATTGTAAATATA---AAACCTGCCTCAGTTAGAATGAATGG-AAAGCAGATCTACAATTTGCTAATATAGGAATATCAGGTTGACTATATAGCCATACTTGAAAATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGATGTACAGTTCACTTCTGAAGCTAGTGGTTAACTTGTGTAGGAAACTTTTGCAGTTTGACACTAAGAT----AACTTCTGTGTGCATTTTTCTATGC----------TTTTTTAAAAA----------CTAGTTTCATTTCATTTTCATGAGATGTTTGGTTTAT--------AAGATCTGAGGATGGTTATAAATACTGTAAGTATTGTAATGTTATGAATGCAGGTTATTTGAAAGCTGTTTATTATTATATCATTCCTGATAATGCT---ATGTGAGTGTTTTTAATAAAATTTATATTTATTTAATGCACTCTAAGTGTTGTCTTCCTGAAGTTTTTTT chr4 - 94230402 54030759 54030758 54035614 40194789 40194788 40199644 4856 ATAAAGTGTGCATTAAAAAAGAAAAAAGCTTGTTTTTTTCTTTT----CACATCTACAGATCTTTTACGTCTTTCAGGACCAGCGACACAACAG---------------------CAGCAGCAGCATCCACAGC----------GTACTCTCCCTAACA--------------ACCCTCAGTCAAATGCTATTAACACTTACTCGGGTTCAGGTTCTGCAAATCTGTATGTAAGGTTGCCTAATCCAGCCAGTGCTTATCCAAGCTCTTCATACACTTCAGATCCCTATGGAGGGTCTGGTGCCATGAACCTCTATACCACCTCATCACAGCCTGCGGGGTCTTATTTAAATTCTTCCAGTCCCATGAACCCTTATTCTGGATCATTAAGTCAAAATAACCAGTATCCACCCTATCAATGCAATGGAAACATACAGATGGACAACTGCCCCTCTTACTTGGGCTCTTACCCTTCCCAGCATCAGCACATGGACTTGTATAATTGTCAGAGTCAAGACCCTATGTCCAAACTAAGCCTACCACCCATTCAAACATTATACCAGCATAGGTTTGGGAATAACCAGAGTTTTGGTCCCAAGTACTTGAATTACGGAAACCAAAATATGCAGGTAGACTCTTTCAGTAATTGCACCATTAGACCAAATGTACACCACGTAGGGTCTTTTTCTTCTTACTCCACCCACGAGGCTGACGGTCATTTTATGGAGGTTGCCTCAAGGCTAAAATCTAATCTGAGTAATCCAAGCATGGACTATGCCTCCATGAGTAAAACCACTGAACACCATCACGTGCAACCCCCTCCACATTTAGCACGCGACTACCATTCTGCTTCGAGTATGTTTAGCGGTCCTCCTAATTCATTGCATCTCCAAAATAAGGATAGTGAAATGATTTCACATGCAGTAAACGGCTTGTCTAACACGATTCCAGGTCAGAACCACGATAGGACTACAC---CCCAAGGTGGTTTAGATAAAACAGATG-TGCTGA--ATCCTGAAAAA------------------------------------GCTGAGGATCCCGATGAAGTCTGGTCAGATAGTGAACAGAGCTTCCTGGATCCGGAAATTGGAGGAGTGGCAGTTGCTCCATCTCACGGGTCAATTCTCATAGAGTGTGCGAAACGTGAGCTCCATGCAACGACCCCCCTGAAAAACCCCAACAGGAACCATCCCACCAGAATATCCCTTGTCTTTTACCAGCACAAGAGCATGAACGAGCCAAAACACGGGCTGGCTCTGTGGGAGGCAAAGATGGCTGAGAAGGCAAGAGAGAAGGAGGAGGAATGTGAAAAATACGGTCCAGACTACGTGCCTCAGAAATCTTACGGCAAAAAAGCAAAGCGAGAGCCTGCTGAGCCACACGAACCCTCAGAACCAACGTACCTGCGCTTCATCAAGTCTCTTGCACAAAGGACACTGTCGGTCACCACAGACTCCACAGTAACTACATCTCCATATGCCTTTACACGGGTTACAGGGCCTTACAACAGATACATCTAACTTCACACC--TTTGTTGGTTACCTCATCTGAAAA------AAACAGCTCGTCAGTAGGGTAGTCGTCGCTTAGGTTTTGGGGAAGGCAAGGGTGGAGAAGAAAACAGTGTTGTTATTAAACTCATCGGTGGAAAAGGCCTCGGCACACCAGCA--AAAAGAGGTAATCTTGCTAGCGCGCTTATTTTCCACTGATTTTTAAGTGGTCACAGATGGCACGTAGGAAACAAGACCAAAGCATCCTATGCAAAAACAGAAACAAAACAAAACAAAGTGTTTCACAATTTACATTTGAAAACACTGGCCCCGTTGCTGAAAGAGATAATCTGCAAATG-GATTTTTTTTCCTT-CTTACAGTTCTGCACATCTGTGACCACTTTTAATGTCATCAAGTTTGCGTAGTCATGGAACAGGAGCAAAAAAATTCCTATTAAAAAAAAAAATAATACTGTAGTATTACAACTGCAGGAATCTTAAAATAACATCTGGTGCTGAATCTACGATGTACTGAAATACTGGAATTACGGCTTTTTAACACGCAGTTTTTACTGTAACATTATTAGTCTCTTAATTTTATTTAATGAAGTAGATAACGTATAAAACGTAATGAATAGACAGCAAAACACTGAATTTGTTTGGATATTCTAAAAACCATGGTGCTATCTAAGAGAACGGTGTCTTTATTTTAACAGTCAAACAGTTAATGCCTTTATAACAATTAAAATGTCAATGATGTATTCAAATGTTCTTCAACAACAGGGAGGACCTTTTCATTCATGTATGTATTGAATTTACCTGGTGTTAAAATAAGCTTACTTTTTAACGTATGGGAATTACGAGGACCTCTGGATGTTGCTCATCCAGTCAAGTCCTAGAAAAGGACGATAAA-----------------ATAGAGAGATATTT----------------------------TTTTTTAAAATAGTGTTTCAAAAGCACTTTGTCTACCTAAGC-TTGGCAACTTGATCAATGCTGAGGTACTGAGACATTaaaaaaaaagacaaaaaaaaaaaaaaaGAGTTTACTTTGATTTTAAAATGCAAAGataatttttttaaaataaaaaaaaaaaGCTTTTAAATACTTTTG-TTTTAGCCATGCATCTGCTAGTGGGCTA-CATATCCATTTTTAATACAGTCGGTTATGGTAAAAATGGGGCTTACTGGATATAAGGGAATACTTCAGTACACAAAACACACGTTTTTCTGGTGCTCATCTCACACAGCTATACTGT-AAACTGTTTTCTAC-AATTATTATGACAAGTTCATTGCTCAAATATGTACAGTTTTAAGGAAAGAATTTTATATTAACCACAGGTAATAATTAGCAGCATGCAACAGACT----ACAACTAGTTAGCTTGGGCTTCTGCTGTTTTTAAAGATCTGTACGCTCTTCA-ACTATTGAATGGCAGATTGCTTTTGTGTTGATAATTATGTACATTGTGGTGTAAGTCATTTCCCGGT----GCGTCCTCTTTTCCAGGAAGATTGAGCAGACCGATGCCTACACAAGATGAATGAAACAGGGTTAGTTCTGTGTGATTCCGTTGATTAAATAGAAA-AAAAATAGGCAGCTGGCTTGCTGTGGTGGttttaaatcattaatttctattaaaaaaaaaaaaaGCAGGAGAGTTGTATAGTAAATTAAATTGTAAACAAGACTTTTTTTAACGCAATGCTTTAGTATTTTAGTACTGTAAAAATATTAA--------------------------ATCTATATATATTTGGGTTTTGAGCTGAATTCACATC---ATGGTGCTACTCAGCCTGCTACAAATATATCATAATGTGAGCTAA-AATACATTAAAAGGTTTGAGTGATGTTCCTACTTGTCATATACCTCAACACTAGATTGGCAATAGGATATCGAACTGAGTGTGAAAGTTTATATATTGTATACCATCTTTTTCCCCCAATAGCCT----------TTGaaaaaaaaaaaaaacaaaacaacaaaaaaaaaCCTCTCTCAATACTTGACATTTTTGCAAGTATAACTTGAACTTCAGCTTTTTTTTTTTTTTGGTTCTAAAAATTCAGGGATATTTCAGCTCATGTTCT-CCTATGCCAACGTGTCACCTGTGTGTATGTAAAGCTGTTGTAGGTTAAATATATTATTCTTGGGttttttgttttcttttttttttgttccgtttccttttttccttCAGGGATTTAATGCTTTTCTTTTGAATCCCTCCTCTAATTTCTCTTGTACATGTATAGATGTAACTAAAACTAATTTTGTAAATTTGTTAGCTCTTTTTATCGCGGTG-AAAGTGTTTAAGAGATTT--AGAATGTTTTGCCTGTTTCAAACGAATAAACAAAA------GAAAGTAGAATGCACTGAGCTGATTAAAGGGAAAAACGTAAGGCAGGGGTTTGGCAAGTGACTGTTTGCTAGAGTTTTTCAAGTCACTCTCTAAAGAAGGCTTCTCGGATACTGTAATGAATGAAAGAGAATATAAAAAGGTACAGTCTGTACAAGGGCTTCCC-TAAACACGCAAACCTCCACGTCCCAGATATATCTTGTGCAATATACTGTAAGATTA-AGTTTGGTTGAAAGAAATTTTATCTAAGAGAATCACAAGCTAATAACGCAAGGA-------AATCAAAGGAGGCCTTTGGG-TTTAATGGTCAAATATTTATTATGGCAATTTTGCTTTTTTTTTTTTTCCTTAATTCTC-AGTCTGTGACTTTACTCACTGCATTGAAA-------CAAAAGT-TTCACCTTTTTTAAAAGATATTTTTTTTAAATGATAGTTGTGT--CAGATTAATTAAATCATACAGCTTCAC--CTGCGGGTGGTTTTGTATTGTTCATCCAATCCATAGTAGATGTTTGGTTAATAGGCCGTGCACCGTCATTTGCCAAACTGCTGG-CAGCAAGAGCGGGAAGCTTAGCTGGCGAA------------TCACTTATG----------------------TATTGTAAATACCCAAACTGTAACTTCTGGTGTACAGAACCCTGCCTCAGTTGGAACGAATGACAGAGCGGACGTAAAA-TTGCTTGTATAGGATTATCAGGTTGAC--TATAGCCATACTTGAAGATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGGTATAAAGTTCACTTCTAAAGCTAGTGGTTAACTTGTATAGGAAACTTTAGCAGTTTGACACTAAGGTAATGAACTTCTGTGTGCA-TTTTCTATGCTTATGTTCTTTTTTTTAAAAAAAAAAAACCTTTAGTTTCA-TTCATTTTCATGAAATGTTTGGTATGTCTATAAAAAGAATCCAAGGATGGTTATAAATACTGTAAGTATTGTAATGT----AATGCAGGTTATTTGAAAGCTGTTTATTATTATATCATTCCTGATAACGCTGAGATGTGGGTGtttttaataaaatttatatttatttaatGCACTCTAAGT-CTGTCTTACAGAACCTTGTCT .....:.:xx...:..x.xx:..:.x.x..xx..:.x....:.:----.x::..:.....x.....:..x.............:x.::..:...---------------------...x......xx.......----------.:.xxxx...:.:..--------------........x..:.xx..:.:...x....:..x.x...x..x..::.x....::..::.:..::x...:.......::...x.........:.......:...........x:.......:.xx.::.:x.:......:.....x..........x..:x....:..x..x.....:........:.:...............::....:::x..:.:...:....x...:......:.x..................x..:x::...........:..:.x..::....:..:..::..:.....:x.....xx.....::......:x.:..x:..:.........x....:..:..x..:...........:..x...:.x.......xx........:....:..........:xx:.:..:.....:::...:...................x...:xx......:.:...:....................:..:......xxx..x:..:....::....:..:...::x..:..:..:..:....::.:::....x..::..xx.:.:........:.......:..........------------....x::x......:...:---------.x...:.x..:x..::x.:::.....x:.x.x...:..:.:.....:.:.:.::...:.x..x.x:.............:.....x.:...x...x....x..::...:x..:..x..:..x..x.:.x......x..xx.....:.....:...:.x:---:......x..:...x.:...x:.::..-....:.--:..xx.....:------------------------------------..x.....:xx......:...........:..:..:........:........x..x.....:........x..x......x....:..............x........:..:........x.....x..:.....::.:..:..:.....:.....:..:........:..x.....:..............:...........:...........:..x:.......x.....:..x..:........:..:..xx.x.....:.....:..:........:..:..:........:..............::.:..........::..:..:.................:...x.:.....:..x..x........:.................xx.......xx....x..x......................................:..x.....:....................:..x.:.:x....x..--................::......------..x..:.::........x:....:x..:---------..:x.x:....:x.--..::...:xx.....:..xx.:x:...:---x:.....:...::....:..x........--.........x.....:.:.xx..:....x...:.....::.:::..................:x......--.............:..........----.:.x::x:x::..x........:.:............xx.........::.::..::..:.x.....:..x..:.....-...:::::::..::-......::...:......................:x:...........:.............x:.::x...x.---------------------.:...............::x:................x...............x..:.......................:........:.x.:................:x...----------.x.........x::..:...x..---:.x:....---........-...x......................:......:..--......----......:..:......-----.....:..::...x.x..............x.-..:..:...::.x:::....:..x.:..::...x..:..:....-.x.............x..x.x...::x.x......:x.x..-.x.:.......x.......x:.:...:x...x::.:.:.........x.............x.......x.--x.....:.....-----------------...x.x.:.:..x.----------------------------x.x...x....:......:.:.....................-...:........x.......:...........::..x......x.-------------------..........x......:.........x.:..........::x..x...:...:x:...x.....:.....-...................::..:..x.-::.:...........:....:.:....x:x:x.xx................x:..........x.:...x.........::---.....................:-..........-....x.....x...-..x.xx......................x............-----.........x.......::...............x......x:......----.x.:......x:..x::..:.x....:-.....x:....-:..x........-.xx.:..........x:...:...........................::..-x........:::.:----.:.........xx..:..:............:.......:..:.........-...............::.....x..:..:::.....x.....-.....:..........:.............................x...--------...:...::::...............................:..-........:...............................x.....--------------------------..x.........x..:....x:...x...........---.............................................-...x....-...x.........................................x...............:........x.......------:.....:.......x....:::....xxx.:.----------..:.........:x.x..-----------------.:.:.:...........:x.:..x.....................:.:.....---------................................:...-...........:............x........::.............xx.xxx.......x.-------------------------------------------............:x.....x............:..---....:x...........::x...........................:....:...........:.:::x.-....::...x.:.::...--:....x.....x.........:.:::x...x....------....:..............:....x..:..:....x:..........:............:.....x..:....x:..x.xx..x..........x:.:.:..:.:x...x.......x.x..--------------........xx..x:.::x..:......-......x......x:.:..-------.x:...xx.......:.x.:....x:....-.x.....::x...x.x.....xx..x.------------...:..x:xx..:x.-------.....:..............-....x.........x...------.:..x:.x......x.:.....xxxxx.x....:-.:.:....::.x.:::..x.---...x..-------.....:.-..::.:..x:...x..:x:.:x.xx...x....x.xx....:.--..x.x..x:..:x:.xx.xx::..x.:--..:.:x...xx..x..:x.x..x...--......xx.x:..:....:..xx.:x.:.::x:..:........::..........-..:.....:.:.....:x...:.x.x.::------------.:..x..x.----------------------...........:.x:.x..:...:.x:x::.:..---..x............:...:.....:-.:...:..:x..x..-.....x:.......x............--................:.............................................................:.:..x...........:...................:...........x................:.----..............-..........----------...........----------:........-.............:.........x.:.--------.::...::..................................----...............................................:...---.....:..........................................-:......x.x...x:..x.:. 44M4D46M21D19M10D15M14D602M12I19M9I159M3D27M1D6M2D11M36D501M2D24M6D28M9I14M2I28M3I29M2D70M2I24M4I79M1D14M1D73M21I115M10I23M3I8M3I8M1I36M2I6M4I16M5I32M1I44M1I41M1I71M2I12M17D14M28D42M1D45M19I71M1D28M1D81M3I22M1I10M1D14M1D41M5I49M4D27M1I11M1I12M1D52M1I14M4D52M1I42M1D50M8I45M1I46M26D37M3D45M1D8M1I78M6I32M10D18M17I53M9I36M1D63M43I35M3I71M1D18M2D35M6D123M14I27M1D19M7I30M1D27M12I15M7D20M1D18M6I34M1D20M3I6M7D7M1D43M2D27M2D26M2I56M1D29M12D9M22D34M3I26M1I15M1D27M2D146M4I14M1D10M10I11M10I9M1D27M8I42M4D51M3I48M1D21M 3618/4558 79.4% 4856/94230402 0.0% 579/4558 12.7% 51244230 NA +4139 chr4 + 190214555 105282120 105282119 105282193 74 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.............x...x.xx:x........::...........:......x...... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 87084994 NA +3333 chr4 + 190214555 105283179 105283178 105283247 69 AAAAAAAAAAAAAAAAGAGTTCCCTTTTTTCTGCATCCTTGCCAACATGTGTTTATTTTGTTTTGTTTT chr4 - 94230402 76858869 76858868 76858937 17371466 17371465 17371534 69 AGACAAAAAAAAAAAAGAGTTTATTTTTCTTTGCTTCATTGCCAACTTCTCTGTTTGCTTTTTTGTTTT .:.x.................:x:....:.:...x..x........x.x.x.x.x.x:.x......... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 28424310 NA +3275 chr4 + 190214555 105284013 105284012 105284080 68 TATATATATATACATATATATATATACACACACATATATATATATATATATACGTGTATATATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:.......xxx.......:......x...:....:x.:..:.::x:...:..:....:.:..:.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 57116975 NA +3172 chr4 + 190214555 105284019 105284018 105284083 65 TATATACATATATATATATACACACACATATATATATATATATATACGTGTATATATATATGTAT chr4 - 94230402 72800653 72800652 72800717 21429686 21429685 21429750 65 TGTTTACATATATATATATACACACACATATATAAACCAAAAGAAACGTTTATATGATTAAGCAT .:.x..............................x.:xx.x.x.x....x.....:xx..x.:.. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 32483366 NA +3386 chr4 + 190214555 105284020 105284019 105284107 88 ATATACATATATATATATACACACACATATATATATATATATATACGTGTATATATATATGTATATATATATATACGTATATATATAT chr4 - 94230402 64944124 64944123 64944211 29286192 29286191 29286279 88 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATAT .:...x...::....x...x.:...x....:.......x.:.:x:xx.....x.x.x...x.:.....::x.x.:...:...:..... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% 40339896 NA +3258 chr4 + 190214555 105284023 105284022 105284093 71 TACATATATATATATACACACACATATATATATATATATATACGTGTATATATATATGTATATATATATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...:.::..::.............x.....:....x.x.:..:.::.:.:.x.::....:x....:.:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 33653888 NA +3086 chr4 + 190214555 105284053 105284052 105284129 77 TATATATATATACGTGTATATATATATGTATATATATATATACGTATATATATATATGTATATATATATACACATAT chr4 - 94230402 71926809 71926808 71926885 22303518 22303517 22303594 77 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATAT .........x.::.:...:...:.x....x.:......x...x:.xx..:....x.:...:...xx.x..x.x.... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 33357244 NA +3154 chr4 + 190214555 105293315 105293314 105293380 66 TTTTTAAAAAAACTAGAAAAAAAAATACAGCCTCCCCCCTCCAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 94194087 94194086 94194152 36251 36250 36316 66 TTTCTGTAGTAAGTTAAAAAACAAAAACAACCCCCCCCCCCCAAAAAAAAAAACCAAACACAAAAA ...:.:x.:x..x.x:.....x...x...:..:......:.............xx...x.x..... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 11099228 NA +3076 chr4 + 190214555 105294288 105294287 105294354 67 TTAAAAAAAGAAAAAAAAAAAAAAACAGAAAAAAAAAGAAGAAACTGCTGGCTAAATTAACCCTACA chr4 - 94230402 38318745 38318744 38318811 55911592 55911591 55911658 67 TTAAAAAAAGAAAAAAGAAAAAAAAGAAGTTTGTAAAGATAAAGCAGGTGGCAGAATTCATCCTACA ................:........x.::xxx:x.....x:..:.x.x....x:....x.:...... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 66975543 NA +3430 chr4 + 190214555 105295952 105295951 105296029 78 AAAAATAGTGTGTGTGTATATATGTGTGTGTATACACACACATATATACACACACACACACATATATACACACACATA chr4 - 94230402 14964806 14964805 14964883 79265520 79265519 79265597 78 AGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.::.:x....x::::.x......x..:..:.:.....:::...:..:.:...xx......:..::.........:. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 90331146 NA +3356 chr4 + 190214555 105295960 105295959 105296025 66 TGTGTGTGTATATATGTGTGTGTATACACACACATATATACACACACACAC----ACATATATACACACA chr4 - 94230402 4481683 4481682 4481752 89748651 89748650 89748720 70 TGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .....x.x:.....x..........:::....x.:...:...:x....:..----........::..... 51M4I15M 51/66 77.3% 70/94230402 0.0% 4/66 6.1% 100814277 89400278 +3283 chr4 + 190214555 105295969 105295968 105296027 59 ATATATGTGTGTGTATACACACACATATATACACACACACACACATATATACACACACA chr4 - 94230402 14964825 14964824 14964883 79265520 79265519 79265578 59 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ....:.x..:....::....::::..:....:...xx.........::.:......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 90331144 NA +3245 chr4 + 190214555 105295989 105295988 105296069 81 ACACATATATACACACACACACACATATATACACACACATATATATACACACACACATATATATACACACACTAGAATATT chr4 - 94230402 17520749 17520748 17520826 76709577 76709576 76709654 78 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC---CCCACTGGTCTATT ...x.......x.....x.:.......:..:::x.::.x.:....x.....::..:.......:---.x....:.xx.... 64M3D14M 56/78 71.8% 78/94230402 0.0% 3/78 3.8% 87775240 NA +3009 chr4 + 190214555 105295995 105295994 105296058 64 ATATACACACACACACACATATATACACACACATATATATACACACACACATATATATACACAC chr4 - 94230402 7596413 7596412 7596476 86633927 86633926 86633990 64 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ...:.x.::..:...x.::...........:...:....:.x...:.:..x..:::.::...:. 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 97699582 92514973 +3034 chr4 + 190214555 105304947 105304946 105305025 79 ATTACAACAAAGATACAATACAGGATACAAAAAAAAAAAAACAAAAAAATTAAACCAAAAGTAAGCTCTTAGAAAAGAT chr4 - 94230402 48246702 48246701 48246780 45983623 45983622 45983701 79 ATTAAAACCAAAATAAAATCCCTGGAAAAAAAAATAAAAAACAAAAAAACAAAACCCAGAAAACACTTTAGAATAAGAT ....x...x..:...x...x.xx.:x.x......x..............:x.....x.:.:x.x:..:.x::.x..... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 57058245 NA +3529 chr4 + 190214555 105319329 105319328 105319432 104 TGAGCCATGATTGTGAAGAAAAAGAAGGGAAAGGGAAAGGGAAATAAAAAAAGAAAAAGGGAAAGAAAAAAAG--AAAAGAGAAAGAGAAGGAAAAAAAGAAGAAA chr4 - 94230402 69673913 69673912 69674018 24556385 24556384 24556490 106 TAAGATGTAATAGTGGAAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGAAAACCAAAACAGCCTGCAAAATAAAAGCAGGAGAAA .:..x::.:..x...:.:.....:.x..:..x.::.xx:....x........:......:..::..:.:...:--....x..xxx.x:..:x....:x..:..... 73M2I31M 68/104 65.4% 106/94230402 0.0% 2/104 1.9% 35645416 NA +3872 chr4 + 190214555 105319353 105319352 105319454 102 AAGGGAAAGGGAAAGGGAAATAAAAAAAGAAA--AAGGGAAAGAAAAAAAGAAAAGAGAAAGAGAAGGAAAAAAAGAAGA----AAAAGAAAAAAAGAAAAAGAAAAA chr4 - 94230402 5029064 5029063 5029171 89201232 89201231 89201339 108 AGGAGAAATGGGATGTTAAGTGGAGACAGGAAGGAAGGGCATGAAAAAAAAAAGGGAGAGAGGTCAACAAGAAAAGTACAGCTTAAAGGAAAAAAAGGAAAAGAAAAA .:.:....x..:.x.xx..:.::.:.x..:..--.....x.x........:..::....:..:xx.:x..:.....x.x.----...:.........:.......... 32M2I46M4I24M 73/102 71.6% 108/94230402 0.0% 6/102 5.9% 100290289 89924266 +14821 chr4 + 190214555 105329082 105329081 105329515 434 GTCCTTCTCAGAGCATCTTTGGACAACAACAGCTGCTCGGCATCTGTGGGAAATTGTTTTATTCAAGA--GATTGGGGAGCATTGATTCAATTCAGTAGACAAGAGAAGTCAAAATTAC-CATTAGCTACATTAGTGCACTTACTGCTCCAGACTGTGAAAGGAATTGTGAGGCTCCTCACTCAGAGGCCA-CATGAAGGCAATGAAGGAAACCACAATTACCTCCCTGAAGATC-TCTCACCAGGACTGTAATTGGGCATGCCACAGTACTCAGTGTTAGCTGC------AGTGAACAGCCAG-CCTGTCATTGCATGTACAGGAACCATCCTGGAACTAAAAGTCTTGATGACT-TCTGAATCCATTTCTCATAATGTAATCAATAAAATGCTTCATCATGACCCATCAAATCCTGCAGACATTACTAAGAGGCACAAATGATGC chr4 - 94230402 54040977 54040976 54041415 40188988 40188987 40189426 439 GCCCATCTCAAAGCAGGTATAGACAAGAATAGCTGCTCAGCATGCGTGGAAAATAGTTTTACTAAATGTGGAAGGAAAAGCATTGATTCAATCTCATGGACATGAGAAGTCAAAATTGCACAGTTGC--CATTAGTGCTCTTGCTGCTGTGAAGCCTGAAAGGAGTGGAACGGCT----GCTCAGAGGACAACAGAAAGGCAATGAAGGAAGCCAAAATTATTCTTCCGAATTTCCTCTCTCTGCTGCTGTAATTGGGCACCCCAAGGTATTC--TCTTCTCTGCCACAAAAGTGAGCAGTCAAACCCGTCGCTGCATACATAGTAGGCAGCAGAGAACTGACAACCAGGGCAACTATTTCCATTGATTTTTCATAACGTGATCAATAAAATATTTCATTACGACCAACACAATCCTATTTGCATCATCAGAAGACAAGAAAGATGC .:..x.....:....xx.x.:.....x..:........:....x:....:....x......:.x..x:--..xx.:::..............::x:.:....x..............:.-..x.x..--.........x...:.....x:::.x:x........:.x.x:x....----:........x..-..x:...............:...x.....:::::.:...xx..-....x.::xx:.............:x...x:...:..--.x..xx....------.....:...:..:-..:...::.....::.:..x.:x..x.xx:.....:.x.::.xx.:::...-.:.xx..:x....:......:..:...........::.....:.:....x.:xx......::xx:...:.::.::..:..x:..x..... 68M2I49M1I7M2D46M4D12M1I43M1I37M2D10M6I13M1I51M1I90M 297/426 69.7% 439/94230402 0.0% 21/426 4.9% 51288105 NA +3339 chr4 + 190214555 105348136 105348135 105348201 66 GAGAGAGAGAGAGAAAGAAAAAAGAAAGAGAGAGAGAAAGAAACTGCATGTGGAGACAAGACAACT chr4 - 94230402 50974493 50974492 50974558 43255845 43255844 43255910 66 GAGAGGGAGAGACAGAAAGAGGAGAAGGATAGAGGAGGATGAGGTGCATGGTGAGACAAGACAACT .....:......x.:.:.:.::....:..x....::::.x:.:x......xx.............. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 54373643 NA +3115 chr4 + 190214555 105385385 105385384 105385455 71 AATTAGATAGCTGACACATCAGTAAAAAAAAAACAAAAAACAAACAAACAACAACAAAAAAACAAACAAAA chr4 - 94230402 20820934 20820933 20821004 73409399 73409398 73409469 71 AATTAGCAATCCTCCAGATCTGAAATAAACAAATAAAAAAGAAACAAACAATAACAACAAAACCAAGGAAA ......xx.x.:xx..x...x.x..x...x...:......x..........:.....x.....x..x:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 84564451 NA +3040 chr4 + 190214555 105385398 105385397 105385452 55 ACACATCAGTAAAAAAAAAACAAAAAACAAACAAACAACAACAAAAAAACAAACA chr4 - 94230402 16880890 16880889 16880944 77349459 77349458 77349513 55 ATATGTTTGTAAAAATGCAGAGAAAAACAATCAAACAACAACAAAAAAATAAACA .:.::.:x.......x:x.:x:........x..................:..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 88504508 NA +3040 chr4 + 190214555 105385398 105385397 105385452 55 ACACATCAGTAAAAAAAAAACAAAAAACAAACAAACAACAACAAAAAAACAAACA chr4 - 94230402 16866878 16866877 16866932 77363471 77363470 77363525 55 ATATGTTTGTAAAAATGCAGAGAAAAACAATCAAACAACAACAAAAAAATAAACA .:.::.:x.......x:x.:x:........x..................:..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 88518520 NA +3025 chr4 + 190214555 105385410 105385409 105385444 35 AAAAAAAACAAAAAACAAACAAACAACAACAAAAA chr4 - 94230402 72732640 72732639 72732674 21497729 21497728 21497763 35 AAAAAAAACAAAAAACAAACAAACAACAAAAAAAA .............................x..... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 32652770 NA +3006 chr4 + 190214555 105394367 105394366 105394412 46 CCATTTCAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAGAGAGTAA chr4 - 94230402 28994844 28994843 28994889 65235514 65235513 65235559 46 CCATTTCAAAAAAGAAAAAAAAAATCAGGAAAAGAAATGAGAATGA .............:..........xx.:.....:...x....:.:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 76399523 NA +5045 chr4 + 190214555 105396196 105396195 105396353 158 TGTTTAATACCAATTAATATAACATTACTTACATAGAAAA----GACAAATTCTTACCAATTTATAGCTCCTCCATTACACTTCTTCAT-AAGCAATGCTTTCCAACATTGATGAGTGGATTTAATAACTTCAAGAGCAAAAGCCTAGCTCCAAACAAACAAA chr4 - 94230402 54072180 54072179 54072339 40158064 40158063 40158223 160 TGCTGAATACCAACAGCCCTAGCACCA--TGCAAAGATGATGTGGCTGGGTACTTACCATTTAACAGTACCTCCATC-CGTTTTTTTATGAAGCAAAGCTTTCCAGTATTCATGGGTTGATTTAATAATTTCAACAGCAAAATCCTAGTTTACATCAAGGAAA ..:.x........:x:x:x..:..::.--.:..x...x:.----.x::::.x.......x..x.:..:x.......:-.::..:..:..-......x........::...x...:..x..........:.....x.......x.....:.:xx.x...:x... 27M2D11M4I33M1D11M1I73M 108/155 69.7% 160/94230402 0.0% 8/155 5.2% 51324016 NA +10092 chr4 + 190214555 105398904 105398903 105399185 282 AATATGTAAGTTAGTAAAAAGCACTTTTTTAACCATGCTATATATACATATTCACATAAGAA-----------------------ACTTCCCAAGTGAAACGA---------ATATTGTACAGGTATCAG------GAGGTACATTTTAAAATAAAGATTCTCATCTTCACCTTGTTTTTGAATTCTCCATTAAAAGCAAACTGGTTTTCTGGTTTTCCATCTGGTACCTTATATAATCTAAACCAATTAAGAGTAGCTTCCAGGTAACCCGGTTTGAACTTCTTAACATCATCAATATCTGTAAAGAAAAAAACAAAAA chr4 - 94230402 54073978 54073977 54074287 40156116 40156115 40156425 310 AAAGTGAAAGATGGTAAACATTACTTATTC-------CTATTTGAATACCTTCATTTAAAAATTCTTTTTGTTAATGCTCCTCTCACTTTCCAATTCCAACAATTCTAGAATGTATCAAAGAGGTCACAGCACAGAAAGATCCATCTTTAATTGTGGATT---ATCTTCACCTTGTCTTTAAATTCTCCATTAAAAGCGAACTGATTTTCTGGTTTACCATCAGGGACTTTATAACACCGGAACCAGTCAATCGTAGCCTCAAGGTAACCTGGTTTGTGCTTCCTGACATCATCAATATCTGCAGGtataaaaaaaataa ..x:..x...x.:.....x.x:....x..:-------....x.:x.:.:x....:x...:..-----------------------....:....x.xx...:.---------:...::x.x....xx...------:..:.x...:..x..x.:x:....---.............:...:.................:.....:...........x.....x..x..:.....xx.:.x:.....:.:..xx.....:..x........:......x:....:.:................:.::x.x.....x..x.. 30M7D25M23I18M9I18M6I24M3D157M 201/272 73.9% 310/94230402 0.0% 48/272 17.6% 51324926 NA +6233 chr4 + 190214555 105437922 105437921 105438140 219 TAGAATTAAT----ACAGTCTATAAAACAAACCTTTGAGCCTATTTCGCAAACATCAATAGGATCATTATCTCCAAAGCAGTTCGTGCTCTTATCTTTTTCATGGGGATCTTCCCAAGTCTAAAATTTTTTTTTTAAAAAAAAGCAGAAATGTAAGTTAATACTATAATGTACTTTAAT--CTTTCCACATAATCACAAAGT-TTTATAGATAACAATAATCCAAA chr4 - 94230402 54082923 54082922 54083125 40147278 40147277 40147480 203 TGAAATTAATTTTGACAGT------AACAAACCTTTGAACCTATCTCACAAACATCAACAGGATCATTATCCCCACAGCATCCTGTAATGTTATCTGTATGGTTTGGATCTTCCCAGGTCTG------------TCAAAGAAAGAAGCATTGTGAGTCACCA----ACCGACCTGCAATTACTATTCATCTAACCACTGAGTGGTTATAAA-AACACCAATTAAAA .::.......----.....------.............:.....:..:..........:............:...x....x:::..:x.x......x.x.x:.xx...........:....:------------.x...:....x..x.x...:...:.x:.----.x:.xx..x:...--..x.:..:x...:...x:...-x.....:.-....x:...:x... 10M4I5M6D97M12D28M4D13M2I21M1I8M1D14M 145/196 74.0% 203/94230402 0.0% 30/196 15.3% 51354999 NA +3630 chr4 + 190214555 105440350 105440349 105440415 66 CTCCTGGGTTCAAGCGATTCTCCCGCCTCAGCCTCCCAAGTGGCTGGAACTACAGGCGCCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:...........:.x...x.xx.x........::.....:............--..:x...... 54M2D10M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% 87243211 NA +16485 chr4 + 190214555 105446214 105446213 105446564 351 CAAAATTTATTGATATACTAAAACTCCATCCACGTTAATAAATTCCAAATTTACAAACCTCTCCAAATGACATGTCC---TCAGAACCAATTTAAATTCAG-TAGTTCACAGGATTTATAAGGCAATTTTTTCAGAAGACAGGAACATTTTACCATTGTAACAAAAATGTTACCTGAGGGAGGGTACCATAATTCCATATATAACCCTTGTAAGGGAAGATATTCGCCACATAGCGTAGCTTTCCATCCTTTACATATTGTTTAATGGGATTCATTGGCTCCTTGGTGGCAATCTAAGCAAATCACAGAAG--GAAGAAAAGGAGA------TGGGATAAGAAATAATTAATTCTATGTCCAA chr4 - 94230402 54085239 54085238 54085598 40144805 40144804 40145164 360 CAAAATTTATGACGACAATAAAGCCTTA--CataaaaaaaaaattataatttCCAAAT-TATCAAAGAGAAACATCCCTCTTGCAGCTGATCTGCATTCAGGCAGTACTCAAGATTTACAAGGCAATTTACACAGAAGACAGAAAACTTTCACCATTATAACAAAAATGTTACCTGAGGGAGGGCACCATAATTCCATATATAACCCTTGTGAGGAAAGATATTTGCCACATATCGAGGCTTGCCTTTCTTTGTATCTTGTTTAATGGGATTCAACGGCTCCTCAGTGGCAATCTAAGCAGATCATGAAAGACAAAGAGAAAGAGAGGACTGTAAAACAAAAAGCAATTCATTCAGTATCCAA ..........x:xx.:.x....:.:::.--..::xx..x...x.:xx.....x....:-.x..x..:x..x.::...---.::x.:.::..:.:x......-:...x.x..:......:..........x:x..........:..xx...:......:..........................:..........................:...:........:........x..x:....x..x.:....::..x.................x:.......::...............:....:::...--:....:..:....------.:::.:..:..::....x....x:.:..... 28M2D28M1D18M3I21M1I209M2I13M6I31M 263/348 75.6% 360/94230402 0.0% 15/348 4.3% 51360975 NA +4728 chr4 + 190214555 105449347 105449346 105449442 96 TACCTCCATTTTAGCATTTGTCCACCGAGGTATTTCTACAATCATATTAAACAGATTCTGCAGTTAAAAACAAAACAAAGAGAGAACATTAAAAAT chr4 - 94230402 54087919 54087918 54088006 40142397 40142396 40142484 88 TACCTCCATTTTTGCATTTGTCCAACGAGGCACTTCTACAACCATATTAAACAGGACC------TAAAACAAAAACAATTGAAGAAC--TGAAAAT ............x...........x.....:.:........:............:x:.------.....xx.......xx::.....--.:..... 58M6D23M2D7M 73/88 83.0% 88/94230402 0.0% 8/88 9.1% 51361428 NA +7871 chr4 + 190214555 105453935 105453934 105454097 163 AAAGACTGGTAGTTTCCAGTGATTATGCTTAAAACAGTCATTTCATTATTGA---AATGAAGCTCCAGGGAGCATGACTAACAAGCTGTGAAAGTACTCAGCTGCACCTCCTGCCTGTGAATTCTACCAAGGTGTGATTACTAGGCCTCCACCAAGCACTTTTTTT chr4 - 94230402 54096772 54096771 54096937 40133466 40133465 40133631 166 AAAGACTGTCAGTTCCCACCAGCGACATATAAAACAGGCGTTTCATTATTGCTATAATGAAACTCCAGGGAACGTGGCTAACAAGACGTGAAAGTGCTCAGCTGCACCTCACGCCTCGTAATTCTCTAAAGGTGCGATTACCACTTCTCTCTCGGGCATTATTGTT ........x:....:...x::::x.:::x........x.:...........x---......:.........:.:..:........x:........:..............x:....xxx......x:x......:......:.xx:...:x:.::...:.x..x.. 52M3I111M 119/163 73.0% 166/94230402 0.0% 3/163 1.8% 51357163 NA +4897 chr4 + 190214555 105456666 105456665 105456887 222 AAGTCAAAACA-ATACCTCTTTAGAGTTCACCTTCAGAGGAATATCATGAAAGGGGGAAATGTAGTGACCAGTTACATTCTCTGCAAAGACACAAACAAACAAAACAAA---ACAGAATTAAAGCAATAGACACATTGTTCTATA-CAGCAATAATAAACATCCTTATCCACT-------TTTA---------AACTTACGCATTTTTTACAAAGCT-----AACTTTAACTCCCA--ACTTAAAGTTAA chr4 - 94230402 54097376 54097375 54097618 40132785 40132784 40133027 243 AAGCAAAAACATATACCTCTTTGGATCCAGCAAAGAGTGGAATATCGTGAAATGGGGAAATGTATTTACCATCTGCATTCTCTGAAAA---ATAAAACAACAAAGTAAAGTTACAAATCTA----GATAGATACGCTGTAAGATGTCTGCACTGATAACGACTCTTATGCATTATAGAAATCTATGATATAACAACATATGCATCAATTAAACCTCTTCCTGAACTTTAATTCCAAAGACTGAAAAATAA ...:x......-..........:..x::x:.xxxx..x........:.....x...........x.x....x:.:.........x...---.:...xx......::...---...:.x:..----:.....:..::...xxx..:-.x...x.:....xx.::.....x..:.-------.:..---------...x..:....:xx...x.xxx..-----........:...x.--...x...:x... 11M1I76M3D18M3I9M4D20M1I27M7I4M9I24M5I14M2I12M 154/215 71.6% 243/94230402 0.0% 35/215 16.3% 51359290 NA +5496 chr4 + 190214555 105473873 105473872 105474180 308 GAACCTCCGGGA--GCTACTTACTAAAGAAGAGGCGGTAATTCTGCGAGCAGGGCTGGCCGCGCTCCTCAGTGTGGTACAGGGCCATAGCAC---GGC-GCGACCCGGTCCCTGCACTGGTCCCCAACCGCAGGCACGCAGCGGCTGGGGCACCCGTGCGCAGCAGCCGCAGCAGCGCGCTCATGGCGTCAATGACGGTCCTGCTGTGCGCGCGGAGCTACCTGGGGGCTCGGCCGGGCCG----CACGCCGGTGCCCCCTACCGTCCGGAGTCATCCCTCCCGCCCCGGCGCTCGGGCTGCGATC-CTGGTCCCTGCC chr4 - 94230402 54099634 54099633 54099904 40130499 40130498 40130769 271 GGGCCCCGGGGACTGCTACTTACTAAAGTAGAGGCGGTAATCGGGAGTGTTGGGCCGCCCCCGCTGCTCCGTGCCGTAGCGGGCCATGGCGCTGAGGCAGCGGCGCGGCGGCCAC------CCCCACCCCCGCGCCGCCAGCAGC-------------CGCCCCAGCCCCGGCAGCGCACGCATGATGGCTGCGACCGCCTCCCTCC---------CCTTCCTgcgg---ccgccgggcctgcgccgcgccg--gccTCCTGGCGTCCTG-------------GCCCCTGCCCT--GGCTGTCCCCACCGGTCCCTGCC .::..:.x....--..............x............:xx.x.x.:x....:.x..x....x...x...:x...xx.......:..:.---...-...:.x...:xx.::.------.....x..x.:x..xxx....:..-------------...xx.....x.:.......:.x....::.x.x::...x.:.::x..x:---------x..x....x..---.x........x----.:.....--...:...:x.....x.-------------.....x..x..--.....:xx:.-.:.......... 12M2I78M3I3M1I16M6D24M13D49M9D11M3D11M4I7M2D16M13D11M2D10M1I12M 186/260 71.5% 271/94230402 0.0% 59/260 22.7% 51374239 NA +10790 chr4 + 190214555 105486017 105486016 105486207 191 CAAGAAGGCTGCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAAATAAATATTATCCCTACTACCTGCCACCCCACTGTTAATCAGTGGTGGAAGAATGGTCTCAGAACTGTTTGTTTCAATTGGCCATTGAAGTTTAGTAGTAAAAGACTGGTTAATGATAACAATGCATCATA chr4 - 94230402 36101319 36101318 36101500 58128903 58128902 58129084 182 CAAGAAGACTGGTGGAACTGGCAAGGTCACGGTGTCTGC---------TCAGAAGGCTAAATGAAAGTTCTGTACATCAGCTGCCACCTCAGTTGTAATCAGTGGTGGAAGGGAGATCTCAGAACTGTTTGTCCCAATTGGCCATTAAAGTTTAATAGTAAAATACTAGTTAATGATTACAATACATTTTA .......:...x....:.............x:x......---------..............:..x:..x.x:x:.::.x........:..x.xx................::x.:................::............:.......:........x...:.........x.....:...:x.. 39M9D143M 147/182 80.8% 182/94230402 0.0% 9/182 4.9% 69384698 NA +3004 chr4 + 190214555 105494526 105494525 105494560 35 CAAAACAAAACAAAACAAACAAACAAACAAAAAAC chr4 - 94230402 49148769 49148768 49148803 45081600 45081599 45081634 35 CAAAATAAAACAAAACAAACAAACAAACAAAAAGC .....:...........................:. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 56345757 NA +3040 chr4 + 190214555 105494527 105494526 105494566 40 AAAACAAAACAAAACAAACAAACAAACAAAAAACATGGAA chr4 - 94230402 81661610 81661609 81661649 12568754 12568753 12568793 40 AAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAA ....x............................x.::... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 23832917 NA +3081 chr4 + 190214555 105494899 105494898 105494971 73 CAGTACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATA chr4 - 94230402 59607255 59607254 59607327 34623076 34623075 34623148 73 CAATGCCTAATATTAAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATA ..:.:.::x:.x.:....::.....xxxx:.x.:.......:....:.:......:......xx......... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 45887644 NA +3457 chr4 + 190214555 105494907 105494906 105494983 77 CGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 86407063 86407062 86407139 7823264 7823263 7823340 77 CACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA .:::.....:x..............:..x...:..xx.xx.x..x.x:.:.x......:.:.........:...:.. 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 19087844 NA +3468 chr4 + 190214555 105494910 105494909 105495017 108 CTCAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAATATATATATATATATATATATATATATATATATATATATATATATACATACATACATATAAATTTTAAAAAAAA chr4 - 94230402 38338126 38338125 38338230 55892173 55892172 55892277 105 CTTGAAAGCAAAAAAAAAAAAATCACAAATTCTAGTATCAAAGTTTTATGTATGTACATAAATATGTATATAGACACAAATATACAAACACAC-------TTTTAAAATAAA ..::...:x.............xx.x...----.:x.x:.x.xx.x...:...:..:...x....:......x.:.:.x.......x...:..-------........x... 29M4I60M7D12M 74/101 73.3% 105/94230402 0.0% 11/101 10.9% 67156784 NA +3059 chr4 + 190214555 105494944 105494943 105495022 79 TATATATATATATATATATATATATATATATATATATATATATATACATACATACATATAAATTTTAAAAAAAAGAGAA chr4 - 94230402 52487166 52487165 52487244 41743159 41743158 41743237 79 TAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCAGTAGTTTTTAAAAAGGTGGAA ..x..::.:.........x...:.x..:...:.:......x..xx.x......::::.xx.:....x.....::x:... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 53007778 NA +3058 chr4 + 190214555 105509320 105509319 105509377 58 GGAGGGGGAGGAGAGGGAGGGGAAGAAAAGGGAGGGGAAGGAAAGGGAGGAGAAGGAA chr4 - 94230402 7707314 7707313 7707371 86523032 86523031 86523089 58 GGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGAA ...:....:.xx.:..::.:.:..::::..........x...:......:.:.:.... 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% 97802006 92412549 +3162 chr4 + 190214555 105509353 105509352 105509416 64 GGGGAAGGAAAGGGAGGAGAAGGAAAAGGAGAGGAAGACAGGGAAAGGGAGCGGAGGAGAGGGG chr4 - 94230402 69066686 69066685 69066749 25163654 25163653 25163717 64 GGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ...::...:....:::..:...:..:.:.::x...x.:x.:.:...........:..x.:.... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 36442667 NA +3185 chr4 + 190214555 105538147 105538146 105538232 86 AAATACTG-------ATAAAGTTATAAATAAGAAAAAAAACAAAGAAATTAGTGAGTGAGATAGAGTGCTCAAGGTGAGGTTTTCCAGGAAAG chr4 - 94230402 45139295 45139294 45139387 49091016 49091015 49091108 93 AAATACTGGAATATAATAAAGAAATAAAGAAAAAATAAAACAAAAACAACAGTGAATGGTAAAGAAAGTCTGAAAAGAGAATTTCCAAAAAAG ........-------......xx.....x..:...x........:.x.x:.....:..:x.x...:x.::::.::x...:x......::.... 8M7I78M 60/86 69.8% 93/94230402 0.0% 7/86 8.1% 60398852 NA +3583 chr4 + 190214555 105574937 105574936 105575036 100 ATTCCATAGCACATATATATATGCACACACATATATATAGCATATATATATATGTACACACATACACACACATATATACACACACACACACACACACACA chr4 - 94230402 8395776 8395775 8395862 85834541 85834540 85834627 87 ATTCCCCAGGCCATGTGTGTATGTGT-------------GCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....x:..xx...:.:.:....:::-------------.....x.:..:...x....:.::..::.x:....xx...................x..... 26M13D61M 63/87 72.4% 87/94230402 0.0% 13/87 14.9% 97179161 93035394 +3170 chr4 + 190214555 105574978 105574977 105575040 63 ATATATATATATGTACACACATACACACACATATATACACACACACACACACACACACACCAT chr4 - 94230402 14964825 14964824 14964887 79265516 79265515 79265578 63 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT ....:.x.:::...:.....:.::.:::.:...:.xx........::.............::. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 90610153 NA +8184 chr4 + 190214555 105589240 105589239 105589441 202 TTTAACAGAAAAGATGACTCCACAGGGTGAGTGTTCTGTAGCTGAGACCTTAACCCCAGAGGAAGAGCATCATATGAAGAGGATGATGGCAAAGCGGGAAAAGATCATTAAGGAGCTGATACAGACAGAAAAGGATTATCTCAATGATCTAGAGCTGTGTGTTAGGGAAGTGGTTCAGCCCCTGAGAAATAAAAAGGTAAAT chr4 - 94230402 54117733 54117732 54117934 40112469 40112468 40112670 202 TTAAACAGAAAAAATGGCCCCACAGTCAGGATCCACATCCCCTGCCAACTTGCCACGGGAGGATGAGGAAACTACCAAACGCATGATGGCCAAGAGGGTAAAAATCATTGCAGAGCTGATGCACACAGAGAGGGACTATATCAGCGACCTGGATCTCTGCATCAAGGAAGTGATTCAGCCTCTGAGAAACAAGCAGGTAAGT ..x.........:...:.:......xxx.::.x:x.xx:xx...xx.x...:x.x.x:.....x...x.xxx..:x..:x.x........x...x...x...:......:x:........:..x.....:.:...:...x...::..:..:..x..x..::.:.:.......:.......:........:..:x......:. 202M 138/202 68.3% 202/94230402 0.0% 0/202 0.0% 51471507 NA +11821 chr4 + 190214555 105613319 105613318 105613553 235 TTAGGAGGAGAAAACATCCTAAATACAGTG--CTTCTCCATCA-------------GCTCAATGTTTTTTGTTTCTTCAGACTGATAGGCTGGATGTGGATAGCTTGTTTAGCAACATTGAGTCCGTGCATCAGATATCAGCCAAGCTGCTGTCATTGTTGGAAGAGGCCACAACAGACGTGGAACCGGCCATGCAAGTAATTGGTATGTTTATTCTCTTCTCGAGTTCTACAATACAACAGGAAATAAT chr4 - 94230402 54120381 54120380 54120629 40109774 40109773 40110022 249 TTATCAAGAGAAGGTCTGTAAAATACAATGTCCTTTTTCATCCTTCCTCAGAAGCTGCTTAATATTTGT-ATTCCATTAGATTGCTCACTTTGACGTGGATGGCTTGTTTAGCAACATTGAATCAGTCCATCAAATATCAGCCAAGCTGCTGTCACTGCTGGAAGAAGCCACAACAGATGTGGAACCACCCATGCAACTAATCGGTATGTTTACTGTCCTCTTGAGTTCTACAAAGCCACGTGAATGAAT ...xx.:.....:::x.x:x.......:..--...:.:....x-------------...:...:...x.-:..:.x.:...:..x.x:x:.x..:......:...................:..x..x.....:.....................:..:.......:...........:........:x........x....:..........:.x..:...:...........x:.x..:x...xx... 30M2I11M13I13M1D180M 181/234 77.4% 249/94230402 0.0% 16/234 6.8% 51492938 NA +10228 chr4 + 190214555 105627648 105627647 105628012 365 AGGATTCTGGTGCCTTTGTGACAGG----CAACCACAAGTGAAATTACCTTCAATGGTCTTGGCTTAGTCCCTCCTCTGCTCCTAATCATCCCCTCAAACCCACATACATTAGACAGAGCGGTTGTCCTTCACCACTAAAGAAATGCAGCCGAGAGTTATGTTACCGTGGAAACAGAATCACTTTTTGCTGCAAGACACACTGCTTCATCTGCAC--TATTATGAAGCAGAATACATTGGTAGGGCTGGGAGGGGAATAAAATATTCTGCCTGCCAGTGTTGTACTTGGCCTTTGGGGGAATAAATGACTTTCAATTAG---AGTACTTAAATATCTTTTAACTTTAATAATTATTATTAGAGCCTCAACAGAA chr4 - 94230402 54123533 54123532 54123889 40106514 40106513 40106870 357 AGGATGCAGGTGCTTTTCTGACTGTGGCCTTACAGTAACTAAAATGAACTTCTGTGTTCTTAACTCGGTTGTTGTTGTTCCCTTGTTCGCACCTTGAAACCAACATGCATTAGACAGCCCAGTTAACCTTCACTGCTAGGGAA--GAAACCCAGAGCTGTGTTACTGTGGTAACTGAATCATTTTTCACTTTAAGACAGAGCAGTTCA-ATGCAATGTATTATGAAACAGCCGACTTCGGTCAGGATGAAAGAGGCAGGA-------TGCCTGACAGCTTTGTGCTCACTCTGTGAATGAATAGA--GCTCCCAATTAACGTGGTGCTCAG----CTTTTAACTTTAATAATCATGGCTATAA-CTCAACAGGA .....x.x.....:...x....x.x----:x..x::..x.:....x.x....x:..x....::..::..:x:.x:.x.x.:.:.:x..::x..:.x.....x....:..........xx.:...:x.......::...::...--.x.:..x....:.:......:....x...x......:....::..x:......x.x::x....-x....x--.........:...xxx..x.:...x:..x..::..:..x.x:.-------......x...:x....:..::x:..x..::x.....:.--:..::......:---:..:..:.:----.................:..x::..x.:-........:. 25M4I114M2D63M1D6M2I43M7D38M2D12M3I9M4D28M1D10M 236/348 67.8% 357/94230402 0.0% 26/348 7.5% 51504115 NA +3180 chr4 + 190214555 105630657 105630656 105630707 51 TAAAAGAAAAAAAAGAAAAGACAGAAAAAGAGAAGGAGCAAAGAAGGAAAG chr4 - 94230402 40332894 40332893 40332944 53897459 53897458 53897509 51 TAAAAAAAAAAAAAGAAAAAACACAAAAATAGCAGGAACATAAAATGAAAG .....:.............:...x.....x..x....:..x.:..x..... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 65297763 NA +23580 chr4 + 190214555 105630862 105630861 105631265 404 GATGATGTCATTTTGC--------CTTTGTTTTGC-ATTTATCAGGAGAAGTATTCTTGCAGATTAAAGGGCCACTGGAAGATATTTATAAAATCTACTGCTATCACCATGATGAAGCACATAGTATACTGGAGTCCTATGAAAAGGAAGAAGAGCTGAAGGAACATTTGAGCCACTGTATCCAGTCCTTAAAGTAAGGCCTTTTCAAATGATGATTCCCATCTCCTCTCAGTTGCCTAGCAGGGAACATTTTAAATGGATGTAGATGAAAGGTCTCACATAAATCCTATGTTTTATGAGACTTGCTGGGAGCTCTGCTTTGCATTCCCTTTATAAAAAGCTGACATGCCAGAAGCCCTGATTGACTTTTTTTCCCCCTGCGAGAATGACTAAAAATAACATGGAAGAAGATT chr4 - 94230402 54124845 54124844 54125254 40105149 40105148 40105558 410 GATGCTGTTGTCTGGCTTGACATGCTTTGTTTTTCTCTTTAACAGGGGAAGTGTTCTTGCAGATTAAAGGCCCACTAGAAGACACATATAAAATCTACTGCTATCGCCACGATGATGCACACACCATGCTGGAATCCTATGAAAAGGATGAAGAACTGAAGCAGCATTTAAGACACTGTGTACAGTCCTTAAAGTAAGATCTTTTCAAATGATGATTTCCGTCCATAGTCAGTTGCCTAGCAGGGAACATTTTAAATGGATGCAGATGAAAGGTCCCCTGTAAATCCAGAGTTTTATGAGGCTTGCTGGAAGCTCTGGCTTATGCTGCTTTCATGAAAAGATGACAAGCCAGGGGCCATGATTAGATTTCTTTCTCTCT---AAGATGGCCAAAAATAGCACAAGAAAGGTTT ....x...::.:.x..--------.........x.-x....x....:.....:.................x.....:.....:.:x...................:...:.....x.....:.x:..:.....:..............x.....:......x.:.....:..x......:.x................::.................:..:..:x:xx..................................:............:.x::.......x:x..........:........:.......x:..::::.x.:..:..:.....x.....x.....::...x.....::x...:....:.:..---.::...:.:.......:..::::.:.:.x.. 16M8I11M1I343M3D31M 318/401 79.3% 410/94230402 0.0% 12/401 3.0% 51506017 NA +13308 chr4 + 190214555 105645112 105645111 105645409 298 ATAAAAACACACAAAAATGAAAA-----TGTGTTAATAAAACATATGTTTGTGAAACTGATATTATTTATCTGTATTGTAGAGGCAAACCAAACTTATTGGACATGGGCTCTTTGATGATCAAACCAATTCAACGTGTGATGAAATACCCCCTATTACTGTGCGAACTTCGGAATTCCACCCCTCCCTCTCACCCAGATTACAGAGCACTGGACGATGCCTTTGCTGCTGTGAAGGACATTAATGTTAACATCAATGAACTTAAAAGAAGGAAAGATTTAGGTAGG---AAGAGACATGATGAATT chr4 - 94230402 54131772 54131771 54132075 40098328 40098327 40098631 304 ATGACTACACAGAAATATAAAAAGTTTTTGTCTTCAAGGAGTTTCTCCTTATGTGACT--TTTTCTTGGTATAAATTATAGAGGAAAGCCAAACCTAATGGACATGGGATCCCTGATGATCAAGCCTGTACAGCGGGTAATGAAATATCCCTTGTTACTCTGTGAACTGTTGAATTCAACTCCTGTTTCTCACCCTGACCACAAAGCACTACAGGAGGCCCTTTCTACTATGAAAAATATTAATGTGAACATCAATGAACTCAAAAGGAGGAAAGATTTAGGTAAGGAAAAAAAAAACAGTGAATT ..:.xx.....x...x..:....-----...x..x.x::.::x.x.x:..:..x:...--.x..x..x:.x.:x...:......x..:......:..x..........x..::..........:..x:.x..:..x..:........:...:.:.....x..:.....x:x......x..:...x::........x..::...:......:x.x..x...:..x..:..:....::.:........x..............:.....:................:.---..:.:.x.:::...... 23M5I30M2D226M3I17M 216/296 73.0% 304/94230402 0.0% 10/296 3.4% 51513340 NA +8443 chr4 + 190214555 105648526 105648525 105648688 163 GTTATTACATTCTTCCTTTTCAGTTCTAAAATACAAGAAGAATGACGAGGATGAATCACTTAAAGACAAATTGTCTAAACTAAATATTCATTCAATTAGCAAGAAATCAAAAAGAGTGACAAATCATCTGAAGATTCTGACCAGAGGAGAATCACAGGTAATT chr4 - 94230402 54132545 54132544 54132707 40097696 40097695 40097858 163 GTCACGAAATTCTCTGTCTGCAGTGCTGAAGTATAAGAGGAACGACGATGATGAAACCCTTAAAGAAAAGTTTTCCCGACTGAATATTCACTCCATTAGCAAGAAATCCAAGAGGGTCACCAGCCATCTGAAAATACTGACAGGGGGAGAACCTCAGGTACTT ..:.:x.x.....::x.:.x....x..:..:..:....:...:.....x......x.x........x..:..x..:x:...:........:..x..............x..:..:..x..x.::........:..x.....x:.:......:.x......x.. 163M 121/163 74.2% 163/94230402 0.0% 0/163 0.0% 51515981 NA +14708 chr4 + 190214555 105659025 105659024 105659339 315 TGAAATGGGCTCATTTTTTCTTTTGGCAGGCATCTCACTTACAGAGACTCATCCTGACCCCCTTGTCAGCCCTGCTGTCCTTATTCCCAGGGCCTCACAAGCTCATCCAGAAACGCTATGACAAACTGCTGGATTGCAACAGCTACCTGCAGCGATCAACGGGAGAGGAGTCAGACTTGGCCAAAAAGGAGTATGAGGCCCTCAACGCCCAGCTTGTGGAGGAGCTCCAGGCATTCAACCAGGCTGCTCGGAAGATTCTGTTGAACTGTCTATGCAGCTTCATTACCCTCCTTAGGGACCTGATGCTCGTGGCAC chr4 - 94230402 54138020 54138019 54138334 40092069 40092068 40092383 315 TAACGTGGGTCTGTTTTATACCTTTCCAGATGGCTCAACTAGACAAGGTTGTTCTGACTCCTCTCTCAGCACTACAAGCCTTGTTTTCAGGCCCACAGAAGCTCATCCAGAAGCGCTATGACAAATTATTGGACTACAACAGCTACCTTCAGAGGTCAACAGGAGAAGAGCTTGATCTAGCAAAGAAAGACTATGAGGCTTTAAATGCACAGCTAGTGGAAGAACTTCAGGTATTCAACAGAGCAGCCAAAAAGATTGTGTTGAACTGTCTGTATTTCTTCATTACCCTCCTCAGAAATATTATGTCTGCAGCAC .:.x:....::::....x.x::..xx...:::x....x:..x.x.::x.::.:.....:..::.x.....x..:.x:x....:..::....x..x..x..............:............:.::....:.:............x...x.:.....:.....:...::x..::.:..x..:..:..x........::.x..:..x.....x.....:..:..:....:.......x::..x..:x::......x.............:.::xx...............:..::.:x.x...:::.::.... 315M 217/315 68.9% 315/94230402 0.0% 0/315 0.0% 51521005 NA +20255 chr4 + 190214555 105667107 105667106 105667703 597 AACTTCTCCTTATTTCTCCCAGCCAGAAATGCCACATCAAACTGACATTCATCGCTCCAAACTTCTATCCACATATAGTGCAGAGGAACTCTATCAAGCTAAGCGCAAGTGCAATGCTACACAAGAATATGACATCAATCTTCTGGAAGGAGACTTGGTGGCTGTGATAGAACAGAAAGATCCACTGGGGAGTACAAGCAGGTGGCTTGTGGACACAGGAAGTAAGTT-TTTCCCCAGAACTACCACT--CTTCTTTAAACTGAGATTT-----TTCTGAGGGCACATGTTTGGGAAGAGTATACC--------CATGAACTTGGT----------------TCTTCTTTCTTTTTA-TTTCCTATCCAGATGTGAAAGGATATGTTTATTCCTCCTTCCTAAAACCCTACAATCCAGCAAAAATGCAGAAAGTGGATGCTGAGAACAGGTTCTGTGACGATGATTTTGAGAACATCAGCCTCTTCGTGTCTTCACGGCCAGCTAGTGACAGTGTCACAGGCACCTCAGAAAGCAGCATTGGTGATAGCAGCTCATCTCTTAGTGGCACATGTGGAAAGTTTGAAACAAATGGTACTGATGTTGACAGTTTTCAAGAAGTAGACGAACAG chr4 - 94230402 54141212 54141211 54141828 40088575 40088574 40089191 617 AATTTTTCCTCTTTTC----AGCTCGAATCCCCACGCCAAACAGAAGACCACAGGTCCAAGCTGCTGTCTACATACAGCGCAGAACTGCTGTATCAAGCTAAGCGCAAGTGCAATGCCACGCAGGAATTTGATATTGATCTGCACGAAGGAGAAGTGGTGGCTGTTGTGGAGCAAAAGGATCCCTTCCAAAGTACTAGCAGATGGCTTGTTGACACAGGAAGTAAGTTCTCTGCACAAACATCCCAGTAACAGCTTCCTATTGATTTCTTTTCATTCTGGCCCCATCTGTTTGCTTATGTCGTACTGACAGCTGCATAAAATGGTTTAACAGCATTTTGTTATTTTCTATCTTTTTACTCTGATATCCAGTCCTCAAGGGATACGTGTATTCCTCCTTCCTGAAGCCTTTCAATCCAGCCAAAGCGCAGAAGGACGTAGCAGAGAACAACTTCTGTGGTGATGATTTTG---ATATCAGCCTCTTTGTCTCTTCACGGCCCTCCTCCGACAGCAGCTCAAG---TTCAGGGCACAAGAAGAGTGACAGCGACTCATCTCTTC---ACTCCTGTGAAAATCCCACAACTAATGGCACAGGGGCTGGAGGTTCTCAGGATATGGATGATCAG ..:..:....:x....----...:x...x:x....::.....x..x:x:..:x.x.....:..x..:..:.....:..:.....:xx:..x..........................:..:..:....x...:..::....x.xx........xx..........x:.:..:..:..:.....x:.xx::.....x.....:........x.................-.:.x.x..:.xx.x...x.--.xx...:xx.:...xx.:.-----.....:xxx..:x......xxx.x:x::...:--------...:..x.x.x.----------------.:....x........-.:.xx.......x:x.x..:.....:..x..............:..:..:.x.........x...::......:.xx.xx..x.......:x.......::..........---.:...........:..x...........xx.:xx:.....::x.x..:.---:....::x:..:x.xx:....:...::..........x---:.x.x....:...x::::x...x.....:..x.:x.:..:x:...:...:..x:.:..:..x... 16M4D208M1I19M2I19M5I32M8I12M16I15M1I111M3D49M3D38M3D65M 408/584 69.9% 617/94230402 0.0% 46/584 7.9% 51525895 NA +13795 chr4 + 190214555 105677719 105677718 105678029 311 AATTCCAATAATGTCTTTTGT----TTCTTTGTCTAGATTTTCTATGCAGTTCATGCTTTTCAAGCACGGAGTGACCATGAACTCAGCCTTCAGGAATACCAGAGAGTTCATATACTCAGGTTTTGTGACCTAAGTGGCAATAAAGAGTGGTGGTTAGCTGAAGCTCAAGGGCAGAAAGGATACGTGCCAGCTAACTACCTTGGAAAGATGACTTATGCTTAAGAAAATAAGCCTTCAACTTTTATTTTCCAGCAAGTTGTTGATTGACTACCTCATAAAACTGACATTACAAAACTTT-----GGACCAGAAAGCAAGA chr4 - 94230402 54142591 54142590 54142887 40087516 40087515 40087812 297 AATCCAGATTTTGTATTTTGTGGCTTTCCTTTTTCAGACCTTCTATGCTGTTCATGCATTCCAAGCAAGAAGTGATCAGGAACTCAGTCTTCAGGAATACCAGAAGGTTAGGATACTTCGCTTTTCTGACCTGAGTGGCAATAAAGAATGGTGGCTAGCAGAAGCCAAAGGTCAGAAAGGATACGTACCATCTAATTATCTCGGAAAGATGACATACGCTTAGGAACATAAAGGTCCA----------TTCAGCCAGTTGCT-------------ATGAAGCAGGCAATAATAATCTATTATGGTGTGCAGAAAGCAAGA ...:.x:..xx...x......----...:..x.::...::........x........x..:......x.:.....:..x........:................::...x:x.....:x.x....x......:..............:......:....x.....:x....x..............:...x....:..:..:...........x..:.....:...x....:xx.:..----------.:....x.....:.-------------..:..:.x.:..x..xx..x..x.-----x.xx............ 21M4I213M10D14M13D24M5I16M 224/288 77.8% 297/94230402 0.0% 32/288 11.1% 51535128 NA +28591 chr4 + 190214555 105682727 105682726 105683382 656 GCCACATTACTTCTTGAGTTTCTTTTGGGCAGCTTTCTTCTTGACCATCTGTAATCGCTTCATAGCATTGAGCTGTGATTCTTGTGAAGTTGGGCCTTTAAGGGATGCTGAGGGAGAGCTGCTGGATTCTGAAGTAGTTTTGCTGGTAGTACTTCCACTAGGTCCTGATGTTCCACTATTTCCATTCCCACT---TAGTTGGCTGCTGCTTCCTGGAACTAAACTACTTGGACTAGGAAGACCTACTTTGCTGACATTGTCACAACTAACTGAGCGACTAAGGCCAGTTTTACCCAAGGTTAGAGGTGGAGGTGGTTTTAAAGGTACAGTGGGCGTAGTGCTGTTATTGGAACCTATTTTGGAACCTATTCCACCTTTGGATGATGTTGCCAGACCAGTCAAACCCACAGGTTTCTGGTTAGCTGACGAAGTAGCAGGTTTCCCAGTATTGTTTTGTGTTGTTGAACTCAATTTTGCTGTTGAAGGACCAGCAGAGGAAGTTTTGGCTGCAAAAGCTGCCCATCCAGTTAAGCCAC---TAGTTACTGACGAGGAAACGCTGGCACTAGAAGAATTTCCTGAAATAACTGTGGATGTCTAAAAAAATAAAGTAAATAATTA-CATTAGAGCCAAGTTTAATCAGTACCTGTATAA-ACATCCCA chr4 - 94230402 54149691 54149690 54150337 40080066 40080065 40080712 647 GCTGTACTACTTCTTGAGTTTCTTTTGAGCAGCCTTCTTCTTGACCATTTGTAGCCTCTTCATTGCATTGAGCTGAGATTCCTGAGAAGTTGGGCCTTTCAGGGAGGCTGACTGA---TTACCGGCATCTGCTGTGGTTTTGCTCGCATTGCCACCGCTGTTACTTGCAGTCCCACTGTTGCCATTCCCACTGCTCACCTGGCTGCTGGTGCTCGGCACAGTGCTGCTGGGACTAGGAAGGCCTACTTTGCTAACATTGTCGCTACTTACCGAACGACTAAGAGTGGTTTTTCCCAGTGTCAGAGGTGGAGGAGGTTTCAGCTGAACAGGGCTCGTGCTATTGTTAGCAGAAGCTATTTTTGACCCTAGTCCTGTTTTG---GAAGCTGCCAACCCTGACAGGCCCACAGGTTTCTGGTTATTTGAAGCCGCTGCAGGTTTCCCACCGGCGCTCTGGGCTGTTGATCCCAGTTTGGCAGTTGATGGATTGGCAGAGGAGTTTCTGGCTGCAAAAGCAGCCCATCCTGTAAGGCCACTGGTGGTTGCTGAAGAGGAAACACTTGTACTGGCTGAGTTCCCCGAAACTGCTGCTGAGGGCTAAAA----TAAATAAATCATTCTTATTATAGCGGCATTTATT-------TGTATAATACATCACA ..:::.:....................:.....:..............:....::.x......x...........x.....:..x..............x.....x.....xx..---:.:.:..xx....xx..:........x.:.x.:.:x..:..:xxx.:..xx..:.....:..x...........---:.x:.........x.x.::..x..x:x:..:..x...........:...........:........:.x...x..:..:........:x::.....x....:x..:...........x.....:.:xx.x....x.xx...:x.::.....x::...x.......x..x....x...xx:....---..x.:.....:x..x.x..::..................x:...x.xx.:x............x::x:.:.:..x.:......x.:..:...x..x.....x...:::........:x..:.............x........x..x.:.....---.:...:....x........:..x.:...:.xx..:..:..:....:x:...:x..x.x......----x..:.....x...x-:....x...x:x:....x.-------.......-.....x.. 115M3D74M3I184M3D154M3I64M4D14M1I19M7D7M1I8M 473/639 74.0% 647/94230402 0.0% 25/639 3.9% 51533036 NA +9641 chr4 + 190214555 105686667 105686666 105686841 175 TAGATAAAAATAGAATCTACTATACCTTGACTTCTGTTCTCTTAAACGCTAGAAAAGTTGT------CTCTTGTTTCAGTTTAGTTTCTGGTTTCTTAACCAATGGATCTTTGACAGCTGGAGTTACAGAAACAACTGCAGGGGCTGGTTTCTGCGGTGGTTTCTGAGTTTTTTGAGCCTG chr4 - 94230402 54151706 54151705 54151882 40078521 40078520 40078697 177 TATATATATATAG----TACGTTACCTTTACTTCCGTTCTCTTGAACGCTAGAAAAGTTGTTTGGGTCTCCGGTTTCAATTTAATTTCAGATTTCTTGACCAATGGGTCCTTCACAGCTGGTTCAACTGAAACGACTGCTGGAGCTGGTTTTTGAGGTGGTTTTTGTGTCTTCTGAGCCTG ..x...x.x....----...xx......x.....:........:.................------...:x......:....:....x.:......:........:..:..x........xx:x..x.....:.....x..:........:..x........:..x..:..:........ 13M4D44M6I114M 139/171 81.3% 177/94230402 0.0% 10/171 5.8% 51534961 NA +12666 chr4 + 190214555 105691941 105691940 105692155 215 AGACTGTTTAAAATAAAGAAAAATATGATTCCTACCATTCTTTTCATTTGTCTGGTACATCGGGCACAATACCACACCAGGCGAGGGTCATTCGCTTCCTTGTCTGTCACCTGGGGTTTATGACAATCTCGGTGGTAGAGATTATGGCACTCCTGACATTCTACTAATTGATTGCCAGATGCCACCATCATTTGCCTAAGAAAACATACCATTAA chr4 - 94230402 54153134 54153133 54153343 40077060 40077059 40077269 210 AAAGTGCTCATACTAGACAAAAA----ACTCCTACCATTCTCTTCATCTGTCTGGTACAGCGGGCACAGTACCATACAAGCCGAGGATCATTCACTTCCTTGTCTGTCACCTGAGGTTTATGGCAATCCTGGTGATAGAGATTATGGCACTCCTGACACTCTACTAGCTGATTCCCAGAGATGACAGTCATTTGCCT-GTAGAGCAAACAGTTAA .:.x..:.:.x.x..:.x.....----.:............:.....:...........x........:.....:..x..x.....:......:...................:........:.....::....:.......................:.......::.....x.....x::x..x:..........-:x.:.:..x..x:.... 23M4D170M1D17M 170/210 81.0% 210/94230402 0.0% 5/210 2.4% 51538807 NA +11721 chr4 + 190214555 105693292 105693291 105693520 229 AACTTACCTACAAACAACGCAGGCCAATCCCATCTCCATGGCAAAATCATCAGCACTGGTCTCCTCAAAACTGGAAAGGTCAGCCATAGGTAAATCCTTGCTACTTTGGACAGTAATGGGAGATGACTGTGTTTCTGGTTTCTCCAATCTAGGTTTCTTTGGAATATCAACTCCTTCAGTGATGTCTGATTTCATCTATA--AAAAGCAGGCATCAGAAAATGATAAAGTA chr4 - 94230402 54156648 54156647 54156875 40073528 40073527 40073755 228 AATTTACCTGCATACGACACAGGCCAAACCCATTTCCATAGCAAAGTCATCAGCACTGGTTTCCTCAAAGCTAGATAAATCAGGCATGGATAAGTCTTTACTCGTCTGAACTGTAATAGGAGAGGAACGAGCCTCTTGCTTCTCGAGTCTGGGCTTCTTTGGCACATCAGCTCCTTCAGCAGTATCCCCTTTCATCTATGGCAAACACAGG---AAGAATATGAAAAAGCA ..:......:..x..:..:........x.....:.....:.....:..............:........:..:..x.::....x...:.:...:..:..:..xx.:..:..x.....:.....x..x:.x.::...x.:.....x.:...:..:........x.:....:.........:::.:..:xx..........:--...x:....---x....x....x....:. 200M2I9M3D17M 170/226 75.2% 228/94230402 0.0% 5/226 2.2% 51536644 NA +8104 chr4 + 190214555 105695496 105695495 105695684 189 AGATTAAAATAAAATCTTACTTTATCAGCAGGTCTCTTTTCAGCTTCCTTCTTTACCTTTTCAGTTGTGAGGACCTTGCCATTATTATTACCAGAAGGAAGACTGGATGATATTTTGGGCTCTTGCTTAATGGAAATGTTTTTTGTGCTTGAAATTTTGGGTGGCTCCACATCCTAAAAGATGAAAAAA chr4 - 94230402 54157284 54157283 54157472 40072931 40072930 40073119 189 AGAACAAAAATTAGACTCACTTTATCAGAAGATCTCTTTTCTGTTTCTTTTTTCACCTTTTCTGATGCAGTAGGCTTGCCGTTGTTGTTACCAGAAGGCAAACTAGAAGAGGCTTTAGGATCTTGCTTACTGGAAACAGGTTTGGTAACACATACTTTTGGTTGCTCTACTTCCTAAAAACAGAAACAA ...x:....xxx.:x..:..........x..:.........x.:...:..:..:........x.x..:::x::x......:..:..:...........x.:...:..x..x::...:..x.........x......::xx...x..:x:xx.x.:...x...x....:..x........:xx....x.. 189M 132/189 69.8% 189/94230402 0.0% 0/189 0.0% 51538212 NA +3891 chr4 + 190214555 105695929 105695928 105696005 77 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGTGTATCTGGGACTACAGGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x..:.............x...x.xx.x........::.:x...x....:......x......... 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 87498803 NA +11527 chr4 + 190214555 105699840 105699839 105700065 226 ATTCAAGTACCTTTTGAGATGGACGGTAACTGGAATCAATGCCCCGAGCCAAAGATTCATCAAGCAGTGCTTTTAGCTTTTCAGCAGAATCTTTACTCTTTGAATGCAAGAAACCTAGTGCTTTCAAAAAAATGGGATCAAGTTCCAAGTTCACAGTAGCAGCCATTGCAAACGCCT-----GAAGGAAAAAAAGAGAAAGTAATCTAGAAGACAATGCACAATTATCTAT chr4 - 94230402 54159257 54159256 54159487 40070916 40070915 40071146 231 ATACTAATACCTTCTGAGATGGACGATAACTTGAATCAGCTCCTCTGGCCAAAGACTCATCAAGAAGTGCTTTCAGCTTTTCTGCAGAATCCTTACTCTTGGAACGCAAGAAGCCCAGGGCTTTCAGAAAAATAGGATCAAGCTCCATGTTCACCGCAGCAGCCATAGTGGTGTCTTTGTAGGAAGACAAAGAAAACTAAATAAACAAAACAAAAAGGAAGAACTTTATAT ..x.x.:......:...........:.....x......::x..:.x:........:........x........:........x........:........x...:.......:..:..x.......:......:........:....x......x.:.........x.:::xxx.:.-----....:x...:..:.xx..:...x.x.:.x:.x..x.x.x..:.x.x... 177M5I49M 171/226 75.7% 231/94230402 0.0% 5/226 2.2% 51540583 NA +3018 chr4 + 190214555 105706225 105706224 105706278 54 TTTAATATGTTTTACCCCAACTTCAATCTCTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 88358306 88358305 88358359 5872044 5872043 5872097 54 TTTTATATATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCTGGAG ...x....:....x::.x.x...x.x......................:.x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 17347919 NA +16538 chr4 + 190214555 105717418 105717417 105718071 654 GAATTTTTTTCTTTTGGAAGTCATTTAGTCAG--TCTTCAGAAACAAACCTTATAGCATTATTATCTACTGCAA--ATTTTTACTGATTTCTAGAACA---GGCTTTTGAAACATTCATCTTTTATTTTAGCTTCTAAATGATTATATTCTAAGACCATAATCACTTCAATTTATACTTTAGGTGACCCAATGAAAGAAGAAAATGAAAGCCATAAAGAAAAGTCTTACAGAAGAAGAATACCTGTACCTGGACTTTTCTCACCAAACAGAAGGATGCATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGTTATCTTACTGTGACTGTAAAATCTTTAAAATTTGCTTAGTTGTCACCAAAGAGGTGAGTAGAGATAGTTCACTACTAAGAGATGACCTGATCCAGGATGTTGAAATACAGATTATTTCAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCTGCAGTAGTA--GAACGATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTGAGACACATAATCCAGAAATCCTATGAAGCAGACCCCTTAAAGAAGGAACTTTTGGAACTTCTGGGCTTTAAAAAGACTTGCTTGAAAGCCTGTGCTGAAGTAAGTATAATGTCTTTTTTCTGTTATTTGAA chr4 - 94230402 54169844 54169843 54170482 40059921 40059920 40060559 639 GAAACATTTTCCTCTCAAGGTCCTGCAGTCTACTTGTTCAGGCAGGATGTCTTTAATAGTATCTTATTTTACAATCAGTTTTAGCAGATAATGGAACAACCGCCATTTCAAACCCTC-TGTTTTGTTCTCAATTGTGTAT-----TCTTTTATGACTGTTGT-GTTCTAATTTCTATTTCAGGAACTTCAGCTCAGGAGGAAGATGAAAG---------ATAGCGTCCCTGAAGAA---CATTTGTATTTGGGTTTTTCTCATCAGTATCAAGATAGTATCTTTCCTCTTCACACATCTATTTCACTCTTCTTGCTATCCTACTGTGACTGCAAATCATTCAAAATTTTCTTAGTGCCGACTAATGAA---AATGCAAATGATCAGTTTGTGACAAAAAACCTCCTTGGAGATCTTGAGATCCATTTAATCTCCAAATGTCAGCTTCCTACGGTCGTGCAGAGCTGCTGTTTACCTGCTGTTGTCACGAAAGAT--GGCAAGTTCTGTCGAGCTGGGCTTTCTGTTGTCTTAAGACATATAATACAGAAAACATTCGAGGCAGATCCATCCAAAAAGAATGTTTTGGAACTCCTAGGCTTTAAGAAGACCTGCTTAAAAGCCTGTGCAGAAGTGAGTGCATCTCTTTCTCTTCATTATATTAA ...x:x.....:.:.x:.:...x.x:....x:--.x.....:x.x:.xx::.x..::.x...:x.x.x:.:...--.x.....x:::x.xx.:.....---.x.x...x....x:..-.x....:..:.x:x..x.:x..-----.x..:..x...::.x:.-::.::.....x..:..:...x:x::..::xx.:..:...:.......---------.x..:x.:x.x......---:.::....::...::........:..:xxxx...:xx.:..............:......:.xx.x:.x..::..:....:...........:...x:x..:.......x......xx:x..:..x..:---.:.:x.:..::.:x::.xx.:.x.:.x:....xx.:x::...x....:..x..xx.x..:..x.::::xx....:..xx.::.x..x..:.::........:.....x..x..x--...x...--.:...x..:...x....x..:...x.......x..:.....:.....x......x.x.x:..:.....:..x.:x..:...:.xx..........:..:........:.....:.....:...........x.....:...::.x:x::..:.:.:::....x.x.. 32M2I40M2I22M3I16M1D22M5D17M1D47M9D17M3D129M3D114M2I7M2D167M 405/630 64.3% 639/94230402 0.0% 33/630 5.2% 51547574 NA +20648 chr4 + 190214555 105719029 105719028 105719532 504 TTTCATTTCTTGTTTTGTTT-----------TTGTTTTGTAGGTTAGTCAGTGGACCAGGCTATGTGAACTCACCATCCCTTTGGCTATTGAGAATTTTCTCAGAGAATCTTCTGACCAGCCCCCAACTATACCTGTAGAAATACTACAGCTAGAGAAAAAGCTTAGTGAGCCTGTTAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATG---GAGTTGGGCCTCCCCTTACTAAGGGAAAGGCAA-AGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAACCAGCTACTACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTGTGCTCTTGCCCTGTATCCATCATTTCTTGGTAAG chr4 - 94230402 54172193 54172192 54172701 40057702 40057701 40058210 509 TTTTGTTGCTTGTTGTATTTATTAGATACATTTATTTGACAGGTTAGCCAGTGGACCAGACTCTGTGAGATCAGCATACCTCTGGCTGTTGAAGGATTTTTGACGGCATCTCCTGAGCACTGTCAGACTATTCCTGCTGACATTTTACAGCTTGAAAGAAAACTTGGAGAGCCTGTCCGAGTGCATAACGATGACAAAATTCGAAGGCAAAAGCTTCAACAACAGAAAGCAGGTGCCAAGGCTGCAGCGTCTCTGCTTGAGGAAGAAGCAACAGAAGAAGG----------GAAAGCAGTGGAGGTGCATGAACATCCACTTCCAAGTTTGGAACTGAGTGTAGCTTTCTCTAAGCTACGTGTCCAAGAGGTATCACATGCAGTCAACAGAGAAGCCCCTCTCATCAGGAGAACGAAAACGTCTGACCTTCCACCTTTAGACCATGTTTTTGCAGAGGGGCTTTATTTTACCTTGGCAGATATAGTGCTTTTGCCGTGCATCCATCAGTTCCTGGTAAG ...::..x......x.:...-----------..:...x::.......:...........:..x.....:x...x...x...:.....:....:::x...:.x.x:.x....:....x..x:x:.x:.....x....:x..x..x:.......x..:.:...:...:.x........:x..........:.....:...x.:..x.....:.....:x.:........:..x.:..---::.:..x:x.x:.:..xx:.:...:.:.:....-...:x....----------.:..:..x:x..:.x.:xx..x:x.:..:::xx:...:.........:x..:..x.....x.....xxxx..x..:..:.x.:..xx.:.x::.........:x.::...x......:.:.:.:...:.x..:............:.:..x.....x........:........:..:..::..........x.....:.....x..:........x...:....... 20M11I204M3I33M1I9M10D228M 347/494 70.2% 509/94230402 0.0% 25/494 5.1% 51546836 NA +5409 chr4 + 190214555 105729393 105729392 105729511 119 TTTCCTTTTCT-------AGGAAAAGGGCATTGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTGAGTTTTCTT chr4 - 94230402 54179146 54179145 54179271 40051132 40051131 40051257 126 TTTTTTTTTCTTTCACATAGGAGAGGGGAATTGAAGCAAAGTTTTCTCCTCATCCATGCCCTGACTGGACGATAGATTGGACCATCCTGCCAGCAGCAGTCAATCCTGGAGAAGGTAAGGATTTTT ...::......-------....:.:...x.......::.x.........:..:..x......:x:.....xx.x.......x::.:..x..x..........::..x:::......:..xx..:.. 11M7I108M 86/119 72.3% 126/94230402 0.0% 7/119 5.9% 51550247 NA +3094 chr4 + 190214555 105756492 105756491 105756578 87 ACATACACACACACACACACACACACACACACACACGTATATACATATATACGCATACATATATGTATATATATGTGTGTGTGTGTG chr4 - 94230402 4417349 4417348 4417435 89812968 89812967 89813054 87 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG .....:.:.............x:x...:..:..::x.x:.x.:..:..:..:xx.x:...x..x:....:.:..:.x.:.x.:.:.. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 101339143 88875412 +3067 chr4 + 190214555 105756497 105756496 105756542 46 CACACACACACACACACACACACACACACACGTATATACATATATA chr4 - 94230402 87372747 87372746 87372792 6857611 6857610 6857656 46 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ..x...........x.........:x:.:......:...:...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 18383750 NA +3158 chr4 + 190214555 105756505 105756504 105756551 47 CACACACACACACACACACACACGTATATACATATATACGCATACAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x........:.x.....:...:....:...:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 18383758 NA +3737 chr4 + 190214555 105756510 105756509 105756619 110 ACACACACACACACACACGTATATACATATATACGCATACATATATG--------------------TATATATATGTGTGTGTGTGTGTGTATATATATATATATATATATAATATGTCTTATTATTTC chr4 - 94230402 40224607 40224606 40224735 54005668 54005667 54005796 129 ACACACAAACTAGCACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTC .......x..xx:....:.....x.xx..-....x:........:.:--------------------x..x.x.:...........:...:......x...:....:.:.x:.....:x:..:..:x... 29M1D17M20I63M 79/109 72.5% 129/94230402 0.0% 21/109 19.3% 65531903 NA +3218 chr4 + 190214555 105756521 105756520 105756595 75 CACACACGTATATACATATATACGCATACATATATGTATATATATGTGTGTGTGTGTGTGTATATATATATATAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...x:....::..:......:..:..:.x.....::...x.x.:.:..::.....x..::.:.:x....:.:.:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 34126390 NA +3263 chr4 + 190214555 105756528 105756527 105756594 67 GTATATACATATA--TACGCATACATATATGTATATATATGTGTGTGTGTGTGTGTATATATATATATA chr4 - 94230402 4406403 4406402 4406471 89823932 89823931 89824000 69 GTAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...x.x:......--.xx.x....:.....:..xx....x................:...x:....... 13M2I54M 53/67 79.1% 69/94230402 0.0% 2/67 3.0% 101350125 88864430 +3576 chr4 + 190214555 105756529 105756528 105756606 78 TATATACATATATACGCATACATATATGTATATATATGTGTGTGTGTGTGTGTATATATATATATATATATATAATAT chr4 - 94230402 19704277 19704276 19704354 74526049 74526048 74526126 78 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATAT ..x.............:...:..x.:.....:.x:...............x:.x.xx:.:.x.x.xx..x..:..... 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 86052252 NA +3052 chr4 + 190214555 105756557 105756556 105756604 48 TATATATATGTGTGTGTGTGTGTGTATATATATATATATATATATAAT chr4 - 94230402 19559286 19559285 19559333 74671070 74671069 74671117 48 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAAT ...x.x.x.x..............................:.xx.... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 86197271 NA +9645 chr4 + 190214555 105822937 105822936 105823296 360 TTTCTTGTCTTTCTCAGGTAAAATGTCCAGTGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGTA--------TTTTATCTCTCCTTTCATCCTTTTTAGTCTTT-------------------------------------------------CTAAGATTATGAGACTTTTCTATATTACATTCAAGGTCATGTTTTTATTTGGCAAGATTGTGGTTTCAGAATGAGGAAAAGCTGTGGGGACCAAAG-CTAACTTGTTTGTCTTACTGACTTTTTCAGGGCCATGTTGGAATTGTCCTTGCTCACATGCTGCCATCATGTCAGGTAAAGCCAGAATAAGAGATA chr4 - 94230402 54214372 54214371 54214780 40015623 40015622 40016031 409 TTCTCTGTTATCCCCAGGAAAGATGTCTAGAGATCGAGCTCTGAGGAAACAGCAGCAGTTGAATAATTTGGTAGCAGCAGTGAAAAAGCTTGCTAAGCCTGGAGATATGATTGTGGATTTCTGCAGTGGAGGGGTAAAGTATATTTTTCTCACATGTTGCAATTTCTTTTGGTTTTCATCTTTGCAGCAGCATCCATGTACAACTGCAAAGTGAAAGTATATATGCTGAAATTTTAACTGCTTTTGGAGGTACTGTCAATGGTGAGGGGATACTCAGCATGA-AATGACTCACCAGTGTTGAAAAGT-----GGCTCAAAGATTTTACTGTTTGTTTTTGT---TTTCACAGGGTCATGTTGGAATTGTTCTTGCTCACATGATGCCATCATGTCAGGTAAATTCTAAATAAAAAGTA ..:::...:x.:.:....x..:.....:..x.........:.......:.....:........:..::.x..xxxx.::..:.x...x.xx..:..:.....x..:.x:.................:..x......--------....x..x.x:x..x..x::.:...x.x:...-------------------------------------------------..:.:...x.:.xxx:...:x:x:x...xx....x.x::x.xxxx..:.::...x..-x:..::.:xxx.:..xx......:-----..x:.....-:.xxx:.......:..xx.---...:x.....:..............:............x...................x:.x:.....:.::.. 136M8I32M49I57M1D24M5D9M1I19M3D74M 238/351 67.8% 409/94230402 0.0% 67/351 19.1% 51608565 NA +3052 chr4 + 190214555 105825120 105825119 105825177 58 GTTGGTTGGTTGGTTTGTTTGTTTGTTTGAGACAGATTCTCCCTGCGATGCCCAGGCT chr4 - 94230402 25584079 25584078 25584136 68646267 68646266 68646324 58 GTGGGTTGGTTGGTTTGTTTGTTTGTTTCAGCCAGACTCTTGGAGTCATGGCTTGGCT ..x.........................x..x....:...:xxx.:x...x.:x.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 80241041 NA +10094 chr4 + 190214555 105825601 105825600 105825848 248 TAGTGATAATGCTTTGCCTAATGTCTGAATTATGTTACTAAATATACTATTGTTTTCTGGGTAAAATCTAGGTTACATTAATAGAAAACAAGGAATTATCATTAATTCGTGCTAAGAAGAGAAGTGATGAACTGGGTTTAAGCAACATTTGGTTCATTCAAGCAAATATGGAATATTTTACTGGGATGTTTAATATTGGAGTAAGTAATCAAGTAATTTCAATTTCTTTA-ATTAGCTAAATAAGAAAA chr4 - 94230402 54216011 54216010 54216252 40014151 40014150 40014392 242 TAGTAATGTTGCTCTGATT--TCTCAGTATTATTTTGCCT----TACTAT-GTTGTATGTGTGAAATCTAGGTGGTGCTCATAGAAAATAAGGAGTTGTCTCTGATGCGTGCTAAAGACAGAAGTGATGAACTAGGTTTAAGCAACATTTCATTTATTCAAGCAAATTTGGACTATTTTAATGGCACTTTTAACATTGGGGTAAGTGTTTATAGCTTTTTAATTTCAGAACATTAACCAGATACTGAAA ....:..:x....:..x:.--.x..x.x.....x..:.:x----......-...x.x..x..:..........x::::.x........:.....:..:..x:.:..x........::.x..............:................x:..:............x....x.......x...x.:x.....:.....:......:x.:.x:xxx...:......xxx.-....:.:.:...xx:... 19M2D19M4D6M1D179M1I18M 178/241 73.9% 242/94230402 0.0% 8/241 3.3% 51609590 NA +3016 chr4 + 190214555 105829180 105829179 105829232 53 CTATAATTAAAAAAAAAAAAAAAAAAAAGAAAGGCACCTATCCAGGCTTTTTG chr4 - 94230402 79579993 79579992 79580045 14650358 14650357 14650410 53 CTGCTATTGAAAAAAAAAAAAAAAAAAAGAAGTGTACCACGCCAGGTTCTTTG ..::x...:......................:x.:...xxx.....:.:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 26249187 NA +9147 chr4 + 190214555 105834455 105834454 105834599 145 TTGTAGGTAGCATTGCATGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACACGGGCTTCCTTCGTCACATGCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAAAGTTCAATTTTCCAAAAAGGTGAG chr4 - 94230402 54221202 54221201 54221346 40009057 40009056 40009201 145 TTGTAGGTGGCTCTACATGCATGTGGTGTGGCAACAGACATGGTGATCGAACATTGCATCAAGGCTCGGGCAGCCTTTGTCATCTCCCCTTGTTGTTATGGCTTCATTCAGAACACCATGAAGTTTAAATATCCAAGAAGGTAAG ........:..x:.:.....x.....x....................:..:..:..:.....::.x.....xx....:....:x.x......:........:...............x::.....:..x.x.....:.....:.. 145M 116/145 80.0% 145/94230402 0.0% 0/145 0.0% 51613253 NA +3264 chr4 + 190214555 105837821 105837820 105837892 72 TTTAGAATGATGACT-AATTCCTTTTTTTTCTATTTCAGTGAACAATTCAAGAAAACTTTATCATACAAGGTA chr4 - 94230402 54223160 54223159 54223232 40007171 40007170 40007243 73 TTTAAGACGTTAATTGAATTAGTCTCTTTCTTTTTTCAGTCATCAGTTCAAGGAAATTTTATCCTACAAGGTA ....::.:.x.:.:.-....xx.:.:...::.x.......x.x..:......:...:......x......... 15M1I57M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% 51614661 NA +3164 chr4 + 190214555 105839652 105839651 105839725 74 GAGAGAGAGAGGAGAGAAGAAAGAGAGGAGAAGAAAAGAAAGGAAAAGGAAAGAAAAGAAAAAAGAACTTGGGA chr4 - 94230402 44400495 44400494 44400568 49829835 49829834 49829908 74 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:...:.:..:.:::....:..:..:....:.........:..x:..x..:..x.::xx.x....xx...:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 61439157 NA +6868 chr4 + 190214555 105842021 105842020 105842150 130 CAGAAGATAAAAATA------AACCCACATTCTATTGCTTTTTCTTTTAGGAACACATGATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGTATGTGTTTTCACAG chr4 - 94230402 54226095 54226094 54226229 40004174 40004173 40004308 135 CAAAAGAAAGAAATGCTACCGAACCAATTGTCT-TTACTTTTCCTTTTAGGAGCACATGATCCTTTGTAGGTTTGCAGATCAGACAGCTGTTCATCTTCCACCTGAACGGAAGCTGATAGGTATGAATTTCTACAG ..:....x.:....:------....x.:xx...-..:.....:.........:........:..x..:..:........:...........:..x..:.....:x....:.:...x.........x:...::.... 15M6I12M1D102M 101/129 78.3% 135/94230402 0.0% 7/129 5.4% 51615926 NA +14645 chr4 + 190214555 105845430 105845429 105845800 371 CTGTGTTTCAGGAAAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGTGGGAGTCCCCATTTAAAATGAGATATTCACATTTGAT----ATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCATAACTAGGAAACAG-CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACA-GGGAAATCTT-GGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGCTTTACAATGTGTGATTAAAGGACTGCTGGTTTTTATAGTGAGA chr4 - 94230402 54230631 54230630 54230995 39999408 39999407 39999772 365 CTTTTTTTCAGGAAAGCAGTGTATGGGGCTTGTGGATCTTGATCGAGCATGGGCTGCAGAAGAGTGTAACTACTCTGTCCAAGTTACATCTATGGAGCCAGAGAGCTGTTCTCCAAAGAACAATATGTTTGTGGGCACCCCAGTTTAGAGTATGAAACTTGCACTTGATTTGAAGTTGATCATAAATCTTCA------ATGCATAAAAACATCCAGCAAATAC-AAGCATAGTTGGGAACCAGACATCATGTGTCTTGAACCCATTGTGTTCGGAAAAGGAAGCAGCATGAGAAGTTTTAGAAAGTGAA--CGGCATGCAGAGCATTGGAAA----TTGTAATGTGTCATTAAGCAACTCTTGGCTCTCATAGTGAGA ..x.x..........:.....:...x.x:.x........x.........x.:...........:...::x.....:..:.....x.:...:.................:.....x..:..:..:...x.......x::...x:....:.:.:x..x.:.::..:.....----.x..x::...xx:......------....x:.:x::...:...x.::.x.-x:.....::.:....x...-...:.xx::.........:......:..:.:..:.:.....:..-.:...:.:..-.:....:..--.xx.x....:.....::x...----..::.......x.....:x:...x:...:.:.:......... 169M4I19M6D25M1D19M1I44M1I10M1I9M2D21M4D42M 259/358 72.3% 365/94230402 0.0% 20/358 5.6% 51614799 NA +3445 chr4 + 190214555 105876013 105876012 105876101 89 TTACTAGCTGTGTGACCTTGGGTGAGTTACTTAACCTCTCTTGGTCTCTGGTTCTTCAT-TGGAAAACCA----AGGACAACACTAACCTAGAA chr4 - 94230402 11947208 11947207 11947301 82283102 82283101 82283195 94 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATACAATGCTAACCTTGAA .:....:............:...x...:......:..x:..xx...:.x.x...::...-.:x:...:x.----.:x....::.......x... 59M1I10M4I20M 64/89 71.9% 94/94230402 0.0% 5/89 5.6% 93928805 NA +3092 chr4 + 190214555 105883514 105883513 105883582 69 AACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACATATACACCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:....x.xx.:...:x.:..::x.x....:.......x.....x:...:...:....:.x.:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 89499943 NA +7694 chr4 + 190214555 105897855 105897854 105898150 296 CTTCTCAAAAGTGTCCTTATTTATTTTGAATCTTTTTTTTTGGTAGGTGGCCCAGGCAAATAGTGTCATCGATTGGCCTATGTCGTTATGGTGGGAGGATTGACTGCTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTGTCAGCGTGAGTATCAAGCCTG--GGGACTTCAGTTCCCTGGGAGGTGTGGCTTTCCACCTTGTTCATGGCTTCACCCCACATATCAGAGGGTTCATTACTGA---GCAAGGC--TTGGCCTTGCAGGTCTGACTT--------GGGGATTTTCAGGT-ACAGTCCAGACT chr4 - 94230402 54247662 54247661 54247963 39982440 39982439 39982741 302 CTTCCAAAACGTTTCACCAGCTGGCTTTGAACTGTCTCTTT--CAGGTGGCCCAGACAAATAGTCTCCTCTGCAGGACTGTGCCGGTATGGAAGCAGAATTGATTGCTGCTGGGGCTGGGCCCGTTTGGCCTGGAGACAGTGCCAACGTGAGTACCATTGCTGCTGGGGCTTCTAGTCACTTGTAGGAGAGGCTTGT--ACGTGCACCTGGCCATCCTTCACACA------GTCTTATAATGGACGGCCAAGGCTTTTGCACGTGTGAGTCTGACTTACTTAAAAGGATGTCGTCAGGTGAAAATCCAGTCT ....:x...x..x..x::.x:.:x:..x:.x..x.:.:...--:...........:........x..x..x::x..x..:..:..x.....x:.x..:.....:.................:..::x.x.:...:.......:..:........:..xxx...--...:....x:x..x..x.x...x.x.....x:--x.x..:x.x....:x:x.::....:.------.x:.:..x.:x..---x......--...xx.x..:::.........--------..:x:.:x......-.x.:.....x.. 41M2D120M2I32M2D26M6D13M3I7M2I21M8I14M1I12M 194/286 67.8% 302/94230402 0.0% 26/286 9.1% 51650193 NA +3317 chr4 + 190214555 105898285 105898284 105898373 89 TTTATTTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081936 43081935 43082024 51148379 51148378 51148467 89 TTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...x:..:.:.:......x.:...:x...::.x:.::xx:....xx::...x.:...:...............x.xx..:::...:... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 62816349 NA +3065 chr4 + 190214555 105898292 105898291 105898375 84 CTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081925 43081924 43082008 51148395 51148394 51148478 84 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCT ..x..:...::.:..::.:.x.:......x.:...:..x.::.x:.::xx:...xxx::...x.:...:............... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 62816367 NA +18912 chr4 + 190214555 105911824 105911823 105912323 500 ATTTAAATAAAAGGATACTGTCTCTAGGAATCAGAAATTAATATTCTGGAAATGAAAAATTGGA-TTTGAAAATACAGCATCACAAAAGGTCTGAAATATT-----------TAAATTTAGAATTTGGACTATAGAAGAATAGCATAACTTCA--ATTATTGGTTAATATT-TTTGTTATGAAATGTTT------TTTTATAACAAAATGGTGAC-TAAAATATTACTATTTT-AAACATGTCCTAGATTTT--TTTTTGTTTCAGAAAAGCACTGAAAGTTGAATATGTGTAAGTCTCCGGGAATGTAACAAGTTGATAAATACCC-----AAGTCCAGCCTCCTTACAGAG-----------------AAAAGATCTGGAATTTCTTTTTT-----------------TGGACATTTGTTTTGCAGCTTTCTACGTCTTAAGGCAGAGAATAGCCAGGATAAGGTGCCAGCTCAAAGGTTAGATGAACATATTTCTTGAAATAATTTTGGCTAATCTATGTCTTGAAAGGCATACCTTCTAAA----TAATTTTAC---AAAGCTGTAA chr4 - 94230402 54255179 54255178 54255746 39974657 39974656 39975224 568 ATTTAAATGAAAGGATACTGTCTCTTTAAGAAAAGCATTTGTGTTCTGTTGATGGAAACCTGGAATCTTAAACCACGATACACGAGAATTTGTACAATATTGTATGGTCAAGTAGCTCCTTAGTT--GGTTGAATAAGGATAGCATCACGTCATGATATTTAATTACTCTTATGTATCAGAACATGTTTGTTAACTCTCATAATGCAATGCAGATGTAAGGTGTTTCTATTTTTAAATGTGTACCAGAATTTATTTTTTATTTCAGAAAAGCTCTGAATGTTGAATGTGTGTAAGTCTCCAGGAATGTAACAAGTTGATAAAAGCCCCAGCCAAGTCCGTCCTCCTTACAGGGGAGGAGAAAAAAAAAAAAAAAAAGCTGGAAtttcttttttctttttttttttctttttGGATATTTGTTTTACAGCTTTCTACGTCTTAAGGCAGAGAATAGCCAGCCTAAGGTGCCAGCCCAAAGGTTAGCCCAACATATTTCTTGAAATAATTGTGGAAAGATTATGGCTTG-GAGTCGTGGCCTCTAAGTCGTTAATTGTACATAAAAACTATAA ........:................xx:.:xx.::x...x:.:.....xx:...:...x:....-.:.x...x:..:::.:xxx.:..xx.x.:x......-----------..:x.::xx.:..--.::.:x.x...:.......x..x...--..xx..::...x.x..-.x.:.:.x:.x......------.:.:....::x....xx..:-...::.:..x.......-...::...x.:...x...--.....:............x.....x.......:.............:.....................x:...-----......:x...........:.-----------------....:.x................-----------------....:.........:..................................xx............:..........x:x.....................x...xx.:x:....x....-:..x.:.:x.:.....:----.....x...---...:..:... 64M1I36M11I13M2D26M2I16M1I17M6I20M1I17M1I18M2I73M5I21M17I23M17I117M1D17M4I9M3I10M 380/497 76.5% 568/94230402 0.0% 74/497 14.9% 51656645 NA +8659 chr4 + 190214555 105927238 105927237 105927436 199 TTTTTTTTCTTTTATTA---------TTAAACTAGTGCACGACATCAATGCTATATGATTGGTGTTTCGTTGACCTAGAAATAATGCATGCCATCTTCTTTTCACAGCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTTATGCTGGAAAAACCTGTAATCAAGGTAGGAAA chr4 - 94230402 54262142 54262141 54262332 39968071 39968070 39968261 191 TTTTTGTTATGTCATTGGCATTTGTTTTAAAGTAATGCAC--TGTCAGT----CATGACTGG---------AACCGAAGAATAATGAGCGT--TCTTCTATTTGCAGCTATATGCCAACCAGGATGCAAACACGGTGAATGCATTGGGCCAAACAAGTGCAAGTGCCACCCAGGATACACTGGAAAAACGTGCAATCAAGGTAAGAAA .....x..x.x.:...:---------.....x..:.....--::...:.----:....:...---------:...x.::.......x::.:--......x..::.....:.:.........x..........:........:..:....................:..:..x..x..::..........x..:..........:.... 17M9I14M2D7M4D9M9D20M2D115M 144/182 79.1% 191/94230402 0.0% 26/182 14.3% 51665096 NA +9435 chr4 + 190214555 105937003 105937002 105937198 196 TTTCAGATCTAAATGAGTGTGGCCTGAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACACTTACGGCAGCTACAAGTGCTACTGTCTCAACGGATATATGCTCATGCCGGATGGTTCCTGCTCAAGTATGTCAAGAATCTTAACTGTTTTATAAGTGCTTTGGGCTTGTTTCTGTTGTGCTCTGAGAGCT--TGCTT chr4 - 94230402 54268978 54268977 54269154 39961249 39961248 39961425 177 TTTCAGATCTAAACGAGTGTGGACTGAAGCCCCGGCCATGCAAACACCGGTGCATGAATACCTACGGCAGCTACAAGTGCTACTGTCTGAATGGCTACATGCTTCTGCCAGATGGAACGTGCTCCAGTACGGCAAG---------------------GCTTGGTGCTTTCTTTTTTCATCTCCTCAAAGCTCCTGCTT .............:........x..............x..:..:...x..........:..:..........................x..:..x..:.....:x....:.....xx.x.....x....:.x....---------------------....x.x....x:..:.x.::.x::..x.:....--..... 136M21D34M2I5M 141/175 80.6% 177/94230402 0.0% 23/175 13.1% 51668025 NA +7747 chr4 + 190214555 105938290 105938289 105938426 137 TCTCTTTCCAGGTGCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAGCTGGCTCCTGATGGGAGGACCTGTGTAGGTGAGT chr4 - 94230402 54269911 54269910 54270047 39960356 39960355 39960492 137 TTTGTCCCTAGGTGCCCTTTCTTGTTCAATGGCAAACTGTCAGTATGGCTGCGATGTGCTGAAAGGGGAAGTGCGCTGCCGCTGTCCTTCTCCAGGCCTGCAGCTGGGGCCTGATGGTAGAACCTGCATAGGTAAGT .:.x.::.:.........xx.:..:..x.......................:.....xx.x.....:x..:.:..x....:x..:..x..:..x.............xx........x..:.....::.....:... 137M 105/137 76.6% 137/94230402 0.0% 0/137 0.0% 51668379 NA +10048 chr4 + 190214555 105940051 105940050 105940232 182 AATGCTATTGACTTATGTTTCTA--GATGTTGATGAATGTGCTACAGGAAGAGCCTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTTGGGAGCTACATCTGCAAGTGTCATAAAGGCTTCGATCTCATGTATATTGGAGGCAAATATCAATGTCATGGTAATGAAACCCAACCATTGCTT chr4 - 94230402 54274387 54274386 54274566 39955837 39955836 39956016 180 AATGCAGTT--CCTCTGTTTCCACAGATATCGATGAATGTGCTACTGGGAGAGTTATCTGTCCACGATTTAGGCACTGCGTCAATACTTTTGGAAGCTACATGTGCAGGTGTCATAAAGGCTTTGATTTAATGTACATTGGAGGCAAATACCAGTGCCATGGTAAT--AACCAACATATTTCTT .....x:..--.:.x......:.--...:.:..............x..:....::x:...:..xx..........x..:.....:........:........x....:...............:...:.x.....:..............:..:..:.........--....x.xx:...x... 9M2D12M2I141M2D16M 144/178 80.9% 180/94230402 0.0% 6/178 3.4% 51665664 NA +8384 chr4 + 190214555 105940434 105940433 105940648 215 TTTTTGAAACTGTATATATTTTTTATG----------TCATCATATTTATCTCCTAAATAAG--------------TCTCTTCTTTTCCT-------ACTTTCTGATGCAGACATAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGTGTGTGTGAGTAGCACT chr4 - 94230402 54275410 54275409 54275652 39954751 39954750 39954993 243 TTCTTGAAATT---TGTATTTTTCATGATCGTGCCACTGTTCGTGTTTTTTGCAAAGATAAGCAGGACGTAAGGTTTCTTTTCATTTTTTTGATGTAACTTTCTGTTGCAGATATAGATGAATGTTCCCTTGGCCAGCATCAGTGTGGTAGTTTTTCACGATGTTACAACACACCAGGATCCTACAAATGCAAATGTAAAGAAGGTTACAGAGACAACGGAACAAACTGCATACGTATGTAACTCT ..:......:.---.:.......:...----------.xx..:.:...x.:x.xx.:.....--------------...:...x...::.-------........x......:.....:.....:..x.....:...:.......::.:..:...x.x........:....:..xx..:........:.................x...x::.:::.:...x::.x:..::.::..:x...:.x.. 11M3D13M10I25M14I14M7I149M 154/212 72.6% 243/94230402 0.0% 34/212 16.0% 51665024 NA +3352 chr4 + 190214555 105942095 105942094 105942135 41 ATGTGTGTGTCTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ............x.......................:..:. 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 16120814 NA +9697 chr4 + 190214555 105942163 105942162 105942709 547 AAATAGTATGACTTACAGTAGGTAATATTCTAAATGTGAAAAATGATACCAGTTGTCATTAGATGTTTTTATGTCTGTCAGTGTAATGCTTCACTTTTTAGG--GAGGAATGGTTACATACTGATTTAAGTCTTTGACTCTTT-CAGATATCCCAAAAGTTATGATTGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATTTTAAAGGGTGACACAGGAAATAATAATTGGATTCCTGATGTTGGAAGTACTTGGTGGCCTCCGAAGACACCATATATTCCTCCTATCATTACCAACAGGCC------------------------------------------------TACTTCTAAGCCAACAACAAGACCTACACCAAAGCCAAC---------------------------------------ACCAATTCCTA---CTCCACCACCACCACCACCCCTGCCAACAGAGCTCAGAACACCTCTACCACCTACAA------CCCCAGAAAGGCCAACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGATGTGTTCAGTAAGTC chr4 - 94230402 54277201 54277200 54277825 39952578 39952577 39953202 625 AAGGAGTGTGACTAGTTAGTGGAAACATTCAGAA-----GAAGAGGTATTAATT--CAGCAGAC-TCTTCATGTCAATGAATTATATTCTGAAGTTTCTGGATCGAGGACT-----CATTTTGCTCCCATCTTTATTCTCTTTGCAGTTTCTCCTAACATTATGATTGAACCGTCTGGTTCATGCCATGTATTCAGGGGCA-CAATGTGCTTCCTACGGGAGGCACTGGTAGAACCAGTAGGATTCCTGATGCTGGATG-ACAAGACAACCCCTCAGACCACCATGTGTACTTGCTTTTGTTACAGAAAGGCCGGTGACCAGACCAACAGCTCGACCCACACCTGGGCCAACAACTCGAACCACATTGAGGCCAACAACTCGACCCACACCAAAGCCAACCACTAGGTATGTACCTGTGACAACAAGGCCAGTAACAAAGCCAGTGACAAAGCCTCCACCTCCAACGCCACCTCTACCTACAACAGTAAGACCTACACTACCACC-ACAAAGAATTCCTCTGA-----TAACCACCACACGTCCTTTGCTTGTTCCTGATGAAACTACGTCTTCCCAAGGAGCTACAGATGATAACAGGATACAGATAGATCCTCAGAAACCCCGAGGGGATGTGTTCAGTAAGTC ..:x...:.....x::x:xx..x..:....x:..-----:..:x.:..::.:..--..x:...:-.:..:.....x:.x.:.xxx..x..xx.x...:.:.:--.....x.-----...x:..x.::x.x::..xxx......-...x.x::..x..x:.............x..x...:..xx:......::x.:...x.-:::.::xx..::x.x...x.:...x..x.:x.x:.:.x............:....x.-..xx.::::..:.:x.::x......:.:.x.:.x..x.::....x:.x.....------------------------------------------------:..x.:x.:.........xx....:..............---------------------------------------:...:.xx.x.---.......x...x.:.....:..:..x...:x:x.x...x.xx.x........-....------..:.x..-----:.......:x..xxx.xx:xx.x.:x..x.x..xx.x...::..:.xx:...:::.....x...:......:......:...:............x....:................. 34M5D15M2D8M1D37M2I7M5D27M1I57M1D57M1D53M48I39M39I11M3I52M1D4M6I7M5D118M 344/526 65.4% 625/94230402 0.0% 120/526 22.8% 51664962 NA +11606 chr4 + 190214555 105958161 105958160 105959157 997 ATAGTTGGCTAGAAATTGGTTGCTCTA---TTAAAA-----TGTATTTTCCAGATAAAGACTTTTTAAGTTATTTTTGTTGAA-----TTTTAGAAACTTTTGAAAATCATTTTTAAAAAATGTACCCAGATCAAGGTTGCAGTATAAATCACTGCAGAACAAAATTCGTGAATCTTCATGTGATATATAATTAAATATTTTGGATTCATCCAGATGAATAAAATGACTAGGCCTTTTCCTCCTGCCCTTGTTA-----AAGGTAATGCCTCTTTATCAATACTTCACACACACACACACACAAAAACTCAAAACCT--TTCTCTTGCAGTTCCACGGCAACCTTCA------AATGACTTGTTTGAAATATTTGAAATAGAAAGAGGAGTCAGTGCAGACGA---TGAAGCAAAGGATGATCCAGGTGACACTTACACTC-----TTAGTGCCATCATAATGACATTTTATTGTTTCTCTCCATGAAAATAACTTTTAAATGTAGATCGTTTGGACCATTTGGGAAAATTACACCTGTTTTCTTTAACAACTCAGATTTTCTTTGTAGTTAAATCAGTTGAGCAAAAATAATTA--TGAAT-------CATTTTCTTTTTTAAAAAAATTTTAAAGTAGTACTTAAACTGTAAAAAGGAAATCATATTTTATAAGTGATGATGTAACATTGTTATAATTTGGCAACACTTGTGTGTTCTATTTTTACAGATGATGCACTATTGTGCTGAGAAAAGATTAATGTAATTTCCCTTTGGTCTTATGGAAAGAAGCTCTGGTTATATGGATAGGAGAGAACACTTGTTGTCTAGATACCCCTAGTTCATAGA-TTCATTTGTTGTTTTTTGTTGATTTTCTGATCCACTCATCTTTCTGATTATTTCCTTGTAGGTGTTCTGGTACACAGTTGTAATTTTGACCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTAAAACCATTTCATTTAACTTTTTCTGGTA chr4 - 94230402 54283273 54283272 54284174 39946229 39946228 39947130 902 ACATTTGGTGAGGAATTGTGTGCTTCAAGGTTAAAGATTTCTTTTTTTTCTTGGTTGAAA------AAGCAGCTTTCGTTAGAAGAGCCGTTAGCAGCTTT--GCAATCACCTTTTACAGA---GCTCAGATAAATGTTACAACATAAATCACCCAGGCATAAAGTTTATGAATCTTTGCGTCAACTGTAATTAAATATATTGAATTTTCCAAGAGAAGCACAACGCCCAGAGCTGCTC-TCTGTTTTTTATTATAGATAAGGAAGTGGGTCACTATCTTTATCTCATTCATTT-------------CTGAAAACCTACTTTTCTCACAGTTCCGCGCCAGCCCGGAGTGAGCAATAACCTGTTTGAAATACTTGAAATTGAAAGAGGGATTACTGCTGATGAATTTGAAGCAAATGATGACCCAGGTAACGATCACATCTCCTGTTTGGGGCCC-----AGGGTTTAGGATTGTTT---------GAGATTTCTTGTGCTTGTATACAATTTACAGGACTCCTGGATCTTATGCCTCCTGTTT----------AGGCTATGCTTTTAG--AAA------GAAAACAACCAACTACCTAAATGGGCCTTCATAATCTGTTAGGAAAAGGAACTAA----GCACAGAAATTGCACAAA------------TTGTTAGTAATAATTGCATCCCTTT-TAGTTTCAGTATTTTTGTACATTCTTTTTCT------GGTACTCC-TTCTGCT----ACACTTTATTTTCGTATTTCCGTGCCT------------GCATCAGCCACA----------AGTGCATTTGTT----------CCCCAACCCAAAGACTTAAATCGCTCCCTTTTGCCTTTTGGCTGTTCTGCC----------------------TAGGCACGCTGGTACACAGCTGTAATTTTGACAGCGGCCTGTGTGGATGGATCAAGGACAAGGATGATGGTTTGCACTGGGAGCCAGTTAGAGACGTGTCAGGTAAGACACATGCGTACAATCCTATCCTGTA .:.x....:x..:.....xx....::.---.....:-----.x.x.....:x.:.x:.:.------...:x::...:...::.-----:x....x.:....--:x.....::...x.x.:.---:.:.....x..x...:..::.........:xx:.x.:...:..::........:::..x.xx.:...........x...:...:x:.x...x:.::.x..:.x.:..:x..x:..-..:xx:::..:...-----....x.:..xx..x:....xx..::...:x..:x:-------------..x.......--..:...::.......:..x..:..:xx.------...:..:...........:.......x........::.:.x...x..:..---.........x.....:......:..:x.:...:::-----..:.x...x-----.x.::x.xxx.......---------:.:..xx...x.:xx....x.:x:...:x.xx.:.:xx.:.xx...::...x:.x.:.----------..::.x.x:..x...--...------..:x.x..x:..:..--.:...-------...xx...x..xx:....::xx:...----.:..xx...:..:.x...------------..:.x...:..:..xxx.:x::x..-..:...x:xx.:x:....:::....x...:.------.:.:.x.:-..x....----.x.xx...x.x.x:.x.::.:x..x::------------..x:::.::.:.----------..x:..:.....----------...:.:::..x...-..x.x.:.:.x::.....::xx..xx...x..::.:----------------------....:::x...........:............x::..x..x.............:...x..:..::...::...........:...:.:..:...x::x.......:..xxx.x.:.x:..:::.x..:x... 27M3I6M5I19M6D17M5I13M2D18M3D115M1D14M5I35M13D10M2I28M6I50M3I35M5I9M5D17M9D58M10D15M2D3M6D15M2I5M7I26M4D18M12D25M1D31M6D8M1D7M4D27M12D12M10D12M10D14M1I36M22D133M 545/858 63.5% 902/94230402 0.0% 183/858 21.3% 51674888 NA +14857 chr4 + 190214555 105967171 105967170 105967451 281 TGCTTTTCCCATTCCAGGTGGACAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCACGCTTGGTGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTGACATCAAGAGCGTAAGTA chr4 - 94230402 54287381 54287380 54287661 39942742 39942741 39943022 281 TGCTTTTTGTTTTTCAGGGGGACGATATCTCACCATCTCTGAACCCAAAGGCACAGAGGGAAAAGCAGCACATCTTATTCTGCCGCTGGGCCACGTGGCTCAGGCTGGGGACTTGTGCCTGTCATTCAGACATAAGGTGCCTGGGCTGCATTCGGGCGCCCTCCAAGTCTTTGTGAGGAGAAGTGGTGCTCATGGACCAGCTGTGTGGGGAAGGAACGGTGGCCACGGCTGGAGGCAGACACACATAACTCTGCGAGGACTGGGCATCAAGAGTGTGAGTA .......:x:x..:....x....:......x..x:.x..x.x.x......x.x...:.........x....:::.x:.x..:..x..x....:.x.x::x..xx.x......:................:..:......x.x........:..x...:.x.....:..x........:.:.x::.....:..:...x....:x..........:..:........:...........:.....x..x..::.......:x:x.:.........:..:.... 281M 209/281 74.4% 281/94230402 0.0% 0/281 0.0% 51679790 NA +11521 chr4 + 190214555 105968883 105968882 105969725 843 TTCTCTCCCTAGGTCGTCTTCAAAGGTGAAAAAAGGCGTGGTCACACTGGGGAGATTGGATTAGATGATGTGAGCTTGAAAAAAGGCCACTGCTCTGAAGAACGCTAACAACTCCAGAACTAACAATGAACTCCTATGTTGCTCTATCCTCTTTTTCCAATTCTCATCTTCTCTCCTCTTCTCCCTTTTATCAGGCCTAGGAGAAGAG-TGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTC---TGGCCTGCTTTTGTGCAATCCCAATGAA----CAGTGATA-----------CCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCAT----CCTGATTA------CAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAATCTTTG---CAGATGGCTATGATGTT---ATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG---AGATATGATGTACAATGTGCTTGTGAAATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCT-GACCTGAACTCTGACTTTTACTGCCATTCACTTTATAAAATAAGGGTGTGTAACATATCAAGATACATTTATTTTTATCTGTTTTTTTTTTCCTGTTAAAGACAATTATGTAGAGTGGGCACGTAATCCCT---CCTTAGTAGTATTGTGTTTTGTGTAAATGTGCTATTGATATTAAGTATTTACATGTTCCAAATATTTACAGACTCTAGTTGCAAGGTAAAGGGCAGCTTGTGATCTCA chr4 - 94230402 54289819 54289818 54290613 39939790 39939789 39940584 795 TTGTTTTACCAGGTTATTTTCAAAGGAGAAAAAGGGGAAGGAAGAACTGGAGACATTGGACTGGATGATGTGATGTTGAGAAGAGGACGCTGCTCTGAAGAGCATTAGCAGC------AAAGACAGTGGA-------GTAGCAC-AGCCAACTCCTCCAG----------CCCTTCTCATGCTATTCTTACCGAGCTTTGAAACAGAACTGCATGA-------AAAAGGAAAAACAGATGGAGAATGACAATTTCTTAATGGTCTGC-TAAGTGCAATCTCGCTGAAACTTCAATTAAAAATATGAAGAGCTCCTCCTGGAATTCAGGA-----------ACTCAAAAATCAGTGCTGGTTGTTTCTATTAATCCT-TGCCTCT------AAATCATGTTTTGTATGT-AGTAACTTTATCCCCTATTAAACCCGAGTACTCAGCCAAAGAGC-ACTTGTGAAAAA--GGGATAATTAATTAC--AAGCAGT------ATGAAATCTCTGGCTCGGAAAGTCTTAGTATTAACAGATATTCATTATTTTCCCAT-AGTACTACT--CTTCTATTAATTAGATTTGATGGACA--------GTGGGATTGATCTGGCTTC------AGAGCTATCCGAAGCCTGGACCTGAACTCTGGA--TCACTGCCATTGACCT--TTGAAGAAGGGT-TGCTCCTTATTAAACAGCATTTATTTTGGTCTTGCATTTGTATCA----AAAAGCAGTTACATAGAGTAGGCACTGCATCCTGTAATATTGCTACTGCTGTGTTTTGTGTATATGTG-TATGGTTATTAA-CATATTTATGTTTTTAATATTTACAGACTCTAGTTGCAAGATAATTGGCAGTCTGCTTTCTTA ..x.:.:x.:....::.:........x......:..x:x..xx:x.....:..x......:.:..........xx....:..:...x.:............:.::..:..:.------.xx:...:..:.-------..x..x.-.x..xx:.::....:----------.:..:...x.x::x:.:...:.::..:.x.:.:x...:-..x:.x.-------.:......:xx:.xx...x..x:x.x:x...::---...:....-.xx........:.:x....----..:.x.x.-----------.:.::.:..:...x....:-----------..x:x...::..x:xx...x....x.:x.:x.....-..:....------..:x...x:xx::.::..-..:x.:x::....:.:..----..:..x..------...:.x..-x.....::x...--:x..x.:.x.:....--:......------.x.......:..---.:..x:.::x.::.:..---.x:.:...:x.:..x.x....-....x..:.--....:x..:---....x.....x...--------...::.....::.:x.:..------x:..:..x::xx:....-.............:x--.:.........x..:.--.x:..x......-..:xx.x...:..:xx:..........x:...xx:x...x.x..x----...::..:...::......:.....xxx....:x---:x..:x..x.::.............x.....-...x.x......-:..x.x:.....::x.........................:...xx.....::..:xx...:. 112M6D12M7D7M1D15M10D38M1I7M7D33M3I8M1D19M4I8M11I19M11D36M1D7M6D18M1D18M4I8M6I8M1D12M2D15M2D7M6D12M3I17M3I21M1D9M2D9M3I14M8D19M6D17M1I15M2D16M2D12M1D45M4D34M3I31M1D12M1D63M 500/753 66.4% 795/94230402 0.0% 132/753 17.5% 51679064 NA +3140 chr4 + 190214555 106000873 106000872 106000946 74 AATCTTGCCTTAATTTCCTACTTTGTCTCTAAAATCAGGATAATCATTCATTTATTCAACATTTTTTTGCCTCC chr4 - 94230402 66459082 66459081 66459155 27771248 27771247 27771321 74 AATCTTGTTTTCATTTTCTAAGTTGCCTTTGGAATCATGATTAGTATCCATTTATTCAGAACAGTTTCGTTTTC .......::..x....:...xx...:..:.::.....x...x.x:..:..........:x.:xx...:.::.:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 39541791 NA +3057 chr4 + 190214555 106007036 106007035 106007081 46 CACCTCCACTCCTGGTTAATTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 687923 687922 687968 93542435 93542434 93542480 46 CATCTCCACTTCTGCCTAATCTTTTTTTTTTTTTTTTTCCCCTTTT ..:.......:...x:....:.................::::.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 105319113 84895442 +3039 chr4 + 190214555 106018218 106018217 106018256 39 ACTGTGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGTGA chr4 - 94230402 81629060 81629059 81629098 12601305 12601304 12601343 39 ACTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ...x.....:....:.....................x.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 24389158 NA +3230 chr4 + 190214555 106018219 106018218 106018259 41 CTGTGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGTGAAAG chr4 - 94230402 18982314 18982313 18982354 75248049 75248048 75248089 41 ctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ........:..........x...............x.:... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 87035905 NA +3217 chr4 + 190214555 106018219 106018218 106018263 45 CTGTGTGTATGTGTGTGTGTGAGAGAGAGAGAGAGTGAAAGAGAA chr4 - 94230402 18982312 18982311 18982356 75248047 75248046 75248091 45 ctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..x.....:..........................x..:::..:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 87035907 NA +6868 chr4 + 190214555 106046556 106046555 106046685 130 ACACTCTTGGTTCTTCATATTTGAGGAGATGGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATTAATGCCACCATCTAGAATACAGATTCTTGGATATTTCATCTTCACAAGGTGAGCTGCAAACTGGA chr4 - 94230402 54319376 54319375 54319505 39910898 39910897 39911027 130 ATATTCACAGTCACTTATATTTGTGGAGAAGGAACAGTGAGGAGACCAGTTGGTTTGATCTTGTTGATTCCTCCATCTAGGATGCAGACCCGTGGGTACTTGCTCTTCACCAGATGAGCTGCAAACTGAA .:.:..x::..:x:.:.......x.....x..:.::........:..x.....:..x..:..:..:..x..x........:..:....::.x...:..:..xx.......x..:..............:. 130M 95/130 73.1% 130/94230402 0.0% 0/130 0.0% 51727180 NA +8499 chr4 + 190214555 106095472 106095471 106095689 218 ATATACTTACCTCAGCTGTGTGTTTTGCCACATGCCCCACGATGACAATGACCTTCCCTTTGAAGTTCTGGAGCATAGCAGTGTAAGGGCCCTGGGTAAGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAAATGTGACCACGAATAAAGCTGAGAAGGAAAGTTTAAGGAAAACATTTATTTGTGTGCAATCCTGAG chr4 - 94230402 54330614 54330613 54330820 39899583 39899582 39899789 207 ACAGACTTACAGCAGCTGTGTTCTTCACTGCATTTCCTACAATCACTACAACTCTTCCTTTAAAGCTCTGGAGCGTGGCAGTTGCTGGGCACTGGATGAGATCGCCTTCTGCAGTAAATGCTGATGCAAATGGGACATTGATGCTGCCAGAGATGTGGCCACGGTTAAAGCTTACGAAAAACAGTTAAGGA-----------TATGTGCAAGGCAGAG .:.x......xx.........x:..::.::...x:..:..:..x..x.::..::.:.....:...:........:.:.....xxxx....x....:.:..x..x...........:..x..x.xxx::.....:.::........x..x..:.....:.....:x.......x.x:.::..x:x.......-----------.:.......xx.x... 191M11D16M 144/207 69.6% 207/94230402 0.0% 11/207 5.3% 51764858 NA +12887 chr4 + 190214555 106116190 106116189 106116430 241 ATGCAAAGGATACTCTTCACTATTCCGGATGTCAACCACCAGGAGCTTTGGTTTACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCACACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTCATTTAATGGGATGGATTCTCTTGACTGAAAAAAAAAATGTACAAAAAAAAATATTGAGAATATTATAGAAAAACAA chr4 - 94230402 54334436 54334435 54334676 39895727 39895726 39895967 241 ATTTGAAGGATACTCTTCACTGTTACGGATGTCCACCACCAGCAACTTTGGCTTGCTAGACTTTGTTTTCTTTATAGGTGTTTTGGAATGACTTGGTCCTGTCAATTCACAAAGATCAATCAGATCTTCTGCTGAAATCCGTGGTGACACCTCTGCCTTCAGGTCATCCAACTTGATAGAATCCCTAGACTTCaaaaagaaaaaaaaagaaaaaagtaaaaaaaaaGTAATATAAAGATGA ..x::................:..x........x........x.:......:..:..:..............xx.:.........:.:..:.:..x:x....x.::.....x.::........:..:....................:..:....x...........::..:xx...:..x..:..x....xx.....:...x:x.x.:......:..xx:.:..x:.x...x...:.::. 241M 180/241 74.7% 241/94230402 0.0% 0/241 0.0% 51781754 NA +11646 chr4 + 190214555 106118192 106118191 106118633 442 AATTTAGAATTTGTAGGTAACAAAAAATAAACCATATAAATCATTTACCAGATAGATTTATTTAA------------------AAAAATGGTTTTCA-ATTGGAGTTTCATGTCAGCTCTCACCCCTTGGGTTTCCCCAGTTGTACTCTGAATTTTTCAGTGGTAAAGCACTTGTTCT-CTTACTTCATTAACTTTTAAATAGAAATGGAAATTGCTAAGCTTTATGGGTTTATAGCTTTTAAT---AAAAAATAGGCATTAAGAATCTTAAT----------TTTTTAATATTAAGAATTAAAGCTACTTAAACATCCTGAAATTAAAAGT---GCTTCAGAAAGATTAAAGGGTTTTGAAATCAGCAAGCCATACAATCAATGCTTCCATCTCCTTTTTCATTAGATTGCAATCTC-TACAGGTATTTTTTCC-AGCCTTCACATGAAGTCATACATTTATGAAGATAAAATAAAGAA chr4 - 94230402 54337889 54337888 54338349 39892054 39892053 39892514 461 AATTTAGACTAATCAGATAAAAAAAG--------------CCGTTCATCAGAGAAGACTGCTTAATCACCACCATGCTATAGCAAAAATAATACTTATACTGAAGCTTTAGGTCTAGTTACCTCCCAGAAGTTTCCTGGACAATATCTTAAGTACTTTAAAAGGGAAGAAATTATTCTTCTCACCCCATTAATTTTTAAATACATCTGGGAATTGCTAAGCCATATCCATTTACTGCTCTTAATAACAAGAAACAGTCATTAAGAATTTTGATTTTTTTTTTCTTTTTAATATT-AGAATCAAAGCCGCTTAAGCATTCTCAAGTTAGAAGTCAAGCTTCAGAAAGATTAAAGCACTTCAGAACACGTGGCTAGTGCAATCATAACTCCGATCTATTTTTCCATTAG-CAGTAATCTCTTACAGGCGTTTCATCCTTGCTATTAAATGAAGATATACATTGCTGAG---AAAATAAGCAA ........x.xxx:..:...x....:--------------:.:..:.:....x.::x:.::....------------------......::.x:.:.-.:..:..:..:.x...x:x.:x.x:...xx::......:x:::x:..:::.:.:.x:..:.:x:.x:...x.x..:....-..:..::......:.........x.xx...:...........:x...xx:....:x...:.....---..:...:..x..........:..:..----------...........-.....:.....::.....:...:..x..:...:....---..................x::..:::..:xx.:::x:x:.:......xx:..:.x....x:....:......-:x.:......-......::...:x...-x..:x.:.x......x:.......xx...:---.......:x.. 26M14D25M18I14M1I80M1I65M3I26M10I11M1D37M3I72M1D10M1I16M1I30M3D11M 287/423 67.8% 461/94230402 0.0% 57/423 13.5% 51780303 NA +11176 chr4 + 190214555 106193602 106193601 106193812 211 TCTATACCTGGTAAATCGGAGAAGAGAAGAATACACTCATTAAAGCCATTAGCCAAAAGCCGGTCCCGCAGCTGCTGAAGAATTGCTACTCCAATACAGAATGGGAAAGAGGAATTCCCAAGTAGTAAGGTATCCCAGAGGTGGAAAATTTTGTGTAGTGGAAATACATCTGTAAAACGATAA---------------AAATACAAATAAATTAAAAAACCAAAAT chr4 - 94230402 54358334 54358333 54358559 39871844 39871843 39872069 226 TCTATACCTGGTAAGTCTGAAAAAAGGAGAATGCATTCATTGAATCCATTTGCAAGAAGACGATCTCTCAGTTGTTGAAGTATAGCCACCCCAATGCAGAACGGGAAGGAGGAATTTCCAAGCAACAATGTATCCCACAAGTGAAAAATTTTATGCAAAGGAAAGACATCTGCATAATGAAAacacacatacacacacaaacacacacacacaAAAAGAGCAAAAT ..............:..x..:..:..:.....:..:.....:..x.....x..x.:...x..:..:.x...:..:.....x..x..:..:.....:.....:.....:........:.....:.::..x........x.:...:........:..:.:x.....x.......:.x..:..x..---------------...:...x.:.x.:x....:.x...... 183M15I28M 161/211 76.3% 226/94230402 0.0% 15/211 7.1% 51835268 NA +3795 chr4 + 190214555 106194680 106194679 106194884 205 AATACAATATCAAAAAAACCGGGGGAAGTCATACTTACGAGTAAACATGGTAAGAAACCAAGGGATGGCATAGAGCTATGAGTGGAAAAAGGGGTACAGGGAATGGATAAAAAGGAAATAAAAAAGATAATTAGAATGATTACCAATAAACTAAATGGTAAATGTAAGTTCTATGTTTTGGTCTACTTTATTGGTTAAAATAAAA chr4 - 94230402 54359640 54359639 54359811 39870592 39870591 39870763 172 AATTCAACATTTAAATGGAAAAAAAAAGT-GTACTCACGTGTAAACATTGTAAGAAACCACGGAATAGCATAGAGCT-------GCAAAAGGTG----GGGGATGGCAGGAGGGAAGAGAACAAAAAGCAT--GTTTTATTA-----------------AGATCTAAATTTTTTGCTTAGGTCAAC--TGTTAATTGCATTAAAA ...x...:..:x...x::xx:::::....-:....:...x........x...........x..:..:..........-------.x......x.----...:....xx::.::.:.:.x..x...:.xx..--.xx.x....-----------------.:..x...:..:.x..:..x....x..--.:..::..:x.x..... 29M1D47M7D10M4D33M2D9M17D27M2D17M 118/172 68.6% 172/94230402 0.0% 33/172 19.2% 51835040 NA +3036 chr4 + 190214555 106197392 106197391 106197431 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 16376110 NA +3616 chr4 + 190214555 106197398 106197397 106197453 56 TGTGTGTGTGTGTGTATATATATATATATATATATAATACAAAGTAGGGCAGAAAC chr4 - 94230402 52579775 52579774 52579830 41650573 41650572 41650628 56 TACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAAAC .::............................:.x....:x..x...:...x:.... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 53617623 NA +3147 chr4 + 190214555 106197533 106197532 106197588 56 AAACAACAAAACAAAACAAAACAAAACAAAAAAACACCCACAACT--GTTATAAACAA chr4 - 94230402 42563356 42563355 42563413 51666990 51666989 51667047 58 AATCAATGAAATAGAATAAAGCAAAACAAAAAAAAACCCACAACTAAGTTTTAAAAAA ..x...::...:.:..:...:.............x..........--...x....x.. 45M2I11M 46/56 82.1% 58/94230402 0.0% 2/56 3.6% 63634177 NA +15089 chr4 + 190214555 106206933 106206932 106207496 564 CCTTATCATTTCTCTTAATGGTTACCTGACAACTCTTCATAATTTGCA--------AGCTGAATACTATTCACAGAATTTCAGGAAAACAGTTCCCTT---AAGAATGAATCATACTTTCCT-------------GATCTCATTTTAAATGAGGCCTACT----------------------------ATATTTTTAAAAGCAGAAACACATATCAAGACAAAAATGATAAATATCACCCTGTCTCCAATTTTATCAAATACACATTAT---TCACCCTATTTATATGTAAATCACATAACTACCATGAAATGTA--TAATCTAGGCATCACATCAGTGTACAATATTTCTAACTATTCAAGCTTTAGCAGTGCTCAGTATTC--AGAGTTCCGTGACCCAGAGCAAAAGGAAAAAA-GCCAGAAATCACAATCTCTACTGCAATGGAAGCCTGAATTTCAATGATGAAAGATTAATGAGGGCTTACTTTGATAGGTTTAGTTCTTGAGTAGGAAACTCGGTTTGGTAAATCATTATCAAAGTACCCACTCTTTTACTTGATGAATCTAGCTTGTATTGTTGTTAGAGGCATAGAAAGTTACCT-CAATAATT--AAAGGTAGAACA chr4 - 94230402 54363324 54363323 54363930 39866473 39866472 39867079 607 CTTTGTCATCTCTTTTACAGGCCTGCTAACAACTGTGCCTAGCATCCATACTAGGCAGGTGAAAGCTATTTACAATAATTTATGCCTACAGCTACCCTTTCAGTAAAGTAGCATTTTTTCCTTCAGTTTAAAATAGTCTTCTTTTTATGTGAGAATTATTCAGTAGAATATAGAACAGATGCTATAAAATATTATAAAGAGCGGTGGAGATTATCAACTTAAGGAGAGCAAGCA------------AAGAACTAAGAGATTCACCATACGTATCTCTCTATTTACATGTAAATCACACAAGTCAC-TGCAATGTACTTAATCCAGGCACCACATCAGCTAACAATATTCACAATTATTGGAGTTTCAGCACTGTTCAATATTCTGAGAGCTACATGACCCAAAGCAAATGGGAAGGGTGCCAGGAAATACAATCTTTTCTGCAGCAGGAGCCTGCATTTCGATGATGAAAGATTAATCAGAGTTTACTTTGATAGGATTAGTACTCAAGCACAAAACTCTGGTTCAGATCTCATTACTGAAGTGCATATCCTTCACCTTGATGGATTCTGC-------GTAGTTAGAGGTACAAAAAACCTCTTCCAATAATCTGGAAGGCAAAACA .:..:....:...:...xx..::xx..:......x.x.x..::x.x..--------..x....x:.....:...:x.x..:.x.xxx....:.x..:.---.:x..x.x.x...x:......-------------.x::..x.....x:....:x:..:.----------------------------.....x.x..:...:.x::x:xx......xx:..::.x:::..::.------------x.:xx:..xx.:..x...xx..:---..x.:.......:............:..x.xx.-..x......--.....:.....:........:xx........:x:..:....x:..:..:....x..:...:.....--....:.x.:.......:......x..:..:::-.....:..x:.......:.x.....:::.:......x.....:................x..:.:.............x.....x..::..:.x:......x.x..x:x.xx......:::....:.x:.::...:xx.......:..::x..-------..x........:.:.:...:::x.:.-.......:--:....:.:.... 48M8I42M3I21M13I25M28I46M12D23M3I33M1D9M2I66M2I32M1I153M7D26M1I8M2I12M 371/544 68.2% 607/94230402 0.0% 83/544 15.3% 51843609 NA +8493 chr4 + 190214555 106212695 106212694 106212865 171 TAATTTCTGCTTTTTTT--TTTTAACCACATGTTCTATTAATGCACCAAGTACTTACATCTGGAATGAAACCAATCTCATTGAGATGATTACTCAGCTCTGGATCATGAAATGCAATCATCTGAGAGAAGACAGTCAGATACTCTGAAATTACA---AAGTTTGAGACAATCATCA chr4 - 94230402 54365333 54365332 54365505 39864898 39864897 39865070 173 TAATTTTTCCTTCTTTTACTTTGAGCAATAT-TTATAAGAATGCTC--AGCACTTACATCGGGAATAAAACCAATTTCATTAAGGTGGTTGCTCAGCTCCGGATCATGGAATGCAATCATCTGAGAAAACACCGTTAGGTACTCTGAAATAACAAACAAATTCAAGATCACTGTCA ......:.x...:....--...x.:.x.:..-..x..xx.....x.--..:.........x.....:........:.....:..:..:..:........:........:.................:..x..x..:..:...........x...---..:..::...:x.:::... 17M2I12M1D14M2D106M3I19M 133/168 79.2% 173/94230402 0.0% 8/168 4.8% 51847362 NA +7145 chr4 + 190214555 106230335 106230334 106230478 144 TAGAAAGACATGGAAGACATTTGCTTACCTTGTATTACATGTGAGTTGTCTTTTAAGAAGAAGTTATACAGGTATTTGGGAATAAAAGCAGACATACATGCATAAGCCAAGGCTAAAAGAGAATAAGGCAAAGGCATGTAAAAA chr4 - 94230402 54369565 54369564 54369707 39860696 39860695 39860838 143 TAATAAAAAATTAAAGGCATTTGCTTACCTTGGATAACATGAGAATTATCCTTCAGAAAGAAGTTATACAAATACTTAGGTATAAAAGCAGACATGCAGGCATATGCCAGAGCTGAAA-AAAATAGAAAAAACAGATGCAGAGA ..:x..:.x..x:...:...............x..x.....x..:..:..:..:.::.............::..:..:..x..............:..x.....x....::...:...-.:....:::x...x:x...:.:.:. 118M1D25M 105/143 73.4% 143/94230402 0.0% 1/143 0.7% 51860770 NA +4270 chr4 + 190214555 106231717 106231716 106231854 138 AAAGAGGCTTACCTTCATTATTGAAGTTTAGATATAGGAATGGAGCACAAAGTGAGTCAAGACCTAACACAGAGGGGTTGGGAGAAAGAAGTCAAATAAATATAATCTAGTAGAATTGAAGATATATACCTTATTCAA chr4 - 94230402 54371058 54371057 54371185 39859218 39859217 39859345 128 AAAAGTACTCACCTTCATTGTTAAAATTCAAGTATAGGAATGGTGCACAAAGAGAATCGAGACCTAAAGAGGGAAGAGCCATGAAGAAATGTCATGAACATCTCATTTACTGAATTTG----------TCTTATTCAA ...::x:..:.........:..:..:..:.::...........x........x..:..:........x:x:.:::.:x:x:x::.:.:.x....x:x.x..x.x..:..x.::.x...----------:......... 118M10D10M 83/128 64.8% 128/94230402 0.0% 10/128 7.8% 51860659 NA +10042 chr4 + 190214555 106232930 106232929 106233109 180 AAAGTTACCTTGCCAATACACAAGATCAGGATGAGACACTACCCAGGCTTTTAATACACGCCTAAATTTTGCATGACCTTCTGGTGATGATAACAGTTCATCGTACTGATGACAGCGAGGAATATCCACTTCAATCTGT----------------TAAAATAGCAAAATAATAAGGTGAA------------ACAGTAATTGTGTAAT chr4 - 94230402 54371660 54371659 54371867 39858536 39858535 39858743 208 AAACCCACCTTGCCAGTAGACCAAGTCAGGATGGGAAACAACCCAGGCCTTCAATACCCGTCTAAACTTTGCATGACCCTCTGGTGATGACAGCAATTCATCATACTGATGGCAACGAGGAATATCAACTTCAATCTGTATCACAGCCAAACACAGAATATAGAGAGAAACCAAGGTAAATGAAATAGTACTACAGCAATTGTGTAAT ...x::.........:..x..x.::........:..x..x........:..:.....x..:.....:...........:...........:.:..:......:........:..:...........x............----------------x..x....x:.:.x.x:.....:..------------....:........... 139M16I25M12I16M 146/180 81.1% 208/94230402 0.0% 28/180 15.6% 51861270 NA +5917 chr4 + 190214555 106233568 106233567 106233738 171 TAAGAAAACCT--AAATCATACTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTGCAAAAAATAAAAGAAGATATATTAATTTATCATATCCTTAATACAAATAGTAATATAGAGAAATCTATTT-TTTACAAATATCTAT chr4 - 94230402 54372617 54372616 54372784 39857619 39857618 39857786 168 TAAAAAAAACTGGAAGTCTTACTTGTCTGTCTGTAGGAATCGGTGTGTCTTTATCAATGGCATCGTATTTTGCTTGAATGGCACCCT-----AAATGTAGAAGAATATTTTAAAATAGAAAGCCTTTACTA-ACATAACAACGTATTGTAACATACGTATATGCACATACCTAT ...:....x..--..:..x.........:...........:..x..............x........:..x..x.....:..x....-----....:x.::.::....x....xx..xx.x::.:...x..-.x...::..::..xx.x..:x..:x.-.x.:..x...:.... 11M2I74M5D39M1D26M1I15M 120/165 72.7% 168/94230402 0.0% 9/165 5.5% 51860951 NA +3439 chr4 + 190214555 106234519 106234518 106234600 82 CTGCAGCCTCGAACTCCTGGGCTCAAGTAATCCTTCTGCCTCAGCTTTCCAAGAAGCTGGGACCACAGGCATGTGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:.....:x:.:..:.....:......:x.:.x:xx.x......:..:....x......:..:...--.:..::....::. 67M2D13M 55/80 68.8% 80/94230402 0.0% 2/80 2.5% 88037393 NA +8260 chr4 + 190214555 106235263 106235262 106235391 129 CCTTACCTCAACTCCCAGAAGAGCAGCCCAGGTTAAACCTCTCATAAGAGGAGGAATGTCAACTCTTGCTTCTTTCCAGATTTGGTTTTTTTTATATGGATAAGCCTATGATATCAAAAAAGAAATGAA chr4 - 94230402 54373997 54373996 54374121 39856282 39856281 39856406 125 CCTTACCTCAACACCCAACAGAGCAGCCCAGGTTATGCCTCTCAGGAGAGGAGGGATGTCAACTCTGGCTTCTTTCCAGATCTGGTTTTTCTTATATGGGTAGGCCT----TCCAAAAGAAGAGATTAA ............x....:x................x:.......x:........:...........x..............:........:........:..:....----.x:x...:....:..x.. 107M4D18M 106/125 84.8% 125/94230402 0.0% 4/125 3.2% 51861266 NA +11461 chr4 + 190214555 106236379 106236378 106236811 433 AGAATCCATACCTTTAGCAGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGATGATTAAAGGGAGCGTGGCAGCTGCAGACAACTCATTATTGCTGTTTGAATGAGGTAAATTAGACTGGCTGTAAAAG-----AGAACAAAAGCAATAAAAAAAAAAAATGGACAA---AAGGTACAAAAT-------------TTTCTTTTT--------------------TTTTCCTAACTCT-----ACCAACAGTGATTTCA----------GAAAAAGCACAAAATTTTAAT---AAACCAAAACCTCAGGT------------------TATTATTTTCTA-----TTTAGG----AAACA-----------------TTTTTCAAAGAAAATGTATAAAATTCTTATAAATCTAATATAAATAGAAAGAAAAATAAAT-----CTAAAATGAG------ACTACATATACTCACTCATCTTCAAGTAATGGGTAAAATGCTTCTCCACCAACATCTTTCAATCTCTG chr4 - 94230402 54374849 54374848 54375394 39855009 39855008 39855554 546 AGATCTCATACCTTCAACAGCCTGTCAAACAGAACAATTCTGTTTAGCTGATACTCTGTGTCCCTCTCCCGGATGATCAGAGGTAGATTGGCAGCTGCAGACAGCTCACTACTGCTATTTGAATGAGGTAAAGTTGACTGGCTAGAAAAAGAATTAGGATAGTAGTAGT-AAAGAGGAAAACATACAATTCAAAGTACAAAATAAATATTCAGCAATGCCTTTTTGAATCAGAAGTATAAATGGATCATTTTAAATATTCAGCACAAACAACTGATTCACAGCACAGGGAAAAAGGTTAAAAACTTCAGTTTGGGTTCAGGGCCCTAAATTCACCATTGCAGAGCACCTATCAGCTCTCACTGATTTTAAGGGCCAAACAAGGACACGTAATGGTTGCTCTTGGAAGACAGCTGTTTAGCTGTGCATTGTGCTACTCAAAACTAACACTGCAACATTTGGTCACTTAGATGGGTACAAATCTACACACACTTACTCATCTTCAAGTAATGGATAAAACGCTTCCCCACCAACATCTTTCAGTCTCTG ...x::........:.:.........:..x....:......:.....:..:........:...:....:.x......:.:...x..xx...............:....:..:....:...............x.x........:x....:-----..:.:.:x..:.:.-...:.::....::x....---..:.........-------------.x:......--------------------.:x.::...x.x.-----..x....::x:x....----------:....:.:xx....:..:.:.---::x:..:::..::.::.------------------...:.x:.:::.-----....:.----.....-----------------:.:..x:....x.::xxx.x.:x.x:x:..x:xx...x.xx...:x:.x.xx:x..:.xx.-----..x.:...:.------x.....:.:...:...................:.....:.....:................:...... 150M5I14M1D18M3I12M13I9M20I13M5I16M10I21M3I17M18I12M5I6M4I5M17I61M5I10M6I68M 304/432 70.4% 546/94230402 0.0% 115/432 26.6% 51861530 NA +7298 chr4 + 190214555 106242453 106242452 106242617 165 CAAAATATCTTTCTTACATTTCTTAGCTGGCATAACGACAATGTCACAGTGGTATCATCTAAAAGCGAGCTTCTATCTCGACCTTGTCCAAAGCTTTCACCATCCTCAAAGAGAAAACT--GAAAAGAAATTTTTAAAAATAATATGTACACAAAATCCAGTTTATT chr4 - 94230402 54376851 54376850 54377007 39853396 39853395 39853552 157 CACAGAATTTTACTTACATTTCGGAGCTGGCACAGAGACAAAGTCACAGTTGTGTCATCTAGAAGGGAACTTCTATCTCGTCCTTGCCCAAAGCTTTCACCATCTTCTAACACAAAGCTTCAAAACGGAA----GAAAAAAAAAGT------AAAATTCAGGTCATT ..x.:x..:..x..........xx........:.:x.....x........x..:.......:...x..:...........x.....:.................:..x..x.x...:..--:...x.:..----x.....x..x:.------.....:...x.:... 119M2I9M4D12M6D15M 122/155 78.7% 157/94230402 0.0% 12/155 7.7% 51865602 NA +11497 chr4 + 190214555 106244613 106244612 106244806 194 TTTCTTTCCTTACTTGGGGAGTGTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTTGACAAGCTCTTTCTCCAAGTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCCAGGTAATCATTATTTATATCTAT---------TAAAAGCAAATTTAAGGAATCATTGTATTATATTTTCT chr4 - 94230402 54378416 54378415 54378614 39851789 39851788 39851987 199 TCTCTTTTCTTACTTGGGAAGCGTACAGACAGGTGGTTTTGATCGAATAATTTCCTTGTTGACAAGTTCTTTCTCTAAGTCTCCTCCAGCCAGACACCAGAGATAATAAACCTCTTCAATTGATCTTTCTGCTAGGTAATCGTTATCTTCATCTACAAGGtaaaaaaaaaaaaaacataaaaaatta----attaCAGCTTTT .:.....:..........:..:..:....:.........x........:.................:........:.....x..........:......:..:.....x..:........x...........:........:....:.x:.....:---------x....:x...:x...::...:.----....:.x:..:. 156M9I22M4D12M 155/190 81.6% 199/94230402 0.0% 13/190 6.8% 51866197 NA +9157 chr4 + 190214555 106247127 106247126 106247343 217 ATTTATCATTACCTTTACACAACTGACTGATATCCTCAGGCAGAGTTAAATCAGCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATACTTTGTCCTTCATTAATTGATCTGGGGTTGGCCTTGAGAACATTTAAAATACAGAGCATGAATGAAAGTCATAAAAAATTTCCTAGAA chr4 - 94230402 54379554 54379553 54379760 39850643 39850642 39850849 207 ATCTGCTTTTACCTTTGCATAACTGACTTATGTCTTCAGGCAGTGTTAAGTCAGCACACCTCGGAGAGGATGAGAACAGTCCAGCAGGTTTGTGAAAGGGAGGGTATGCCAAAGATACTTCACTGAACAAATGGTCATGCATCAATTCCTCTGGAGTTGGCCTTAAGTAAA--GACAATACAAAAT-TAAGTG-------TAAAGCACTTCCAAGAA ..:.:::x........:..:........x..:..:........x.....:........:...:....:.....:.....x.::.........xx......:.x:...:xx::x.....:........:.xx.x...x.x...:....xx.....:.........:..x.x.--x.x......:.::-.:.:..-------....:x.:....x.... 171M2D13M1D6M7D17M 152/207 73.4% 207/94230402 0.0% 10/207 4.8% 51867573 NA +4840 chr4 + 190214555 106248236 106248235 106248434 199 AATATCAACCTCTTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTGGTAAATAAAGAGAGAAAATA------------ATTAATTAAAATGATCAATTTTAGAAATATACTTTATTCAAATGTTTGCTAATCTAGAAGTTTTTGATGTTTTTAAAGTTTTTATTTGTACTTTATACAAATTTA chr4 - 94230402 54380358 54380357 54380547 39849856 39849855 39850045 190 AATACTTACCTCTTAGAAGGTTGGAATGTAAGGCATTTTTTCAGCAGAGTTATGACATTTTCAGAAAGATCCTGGAACATA---AGAAAAAATGCAGAGGAGGTCCATTCATT--ACTGCCCAAATTCAGGAAGCCGCTTAACTCATACTT-------------AGCTTTTAATATAC---AGGCTTGTCTTTGAAAGCAATACAATTTCA ....::x.............x.....x........:..x....:x...x:...x...x......:...x......x.x...---...:.....:------------...x...--.x..x:...x..:..:..xx::...x.:...x.:x.-------------..:....:..:.x:---.:.:..x.x....x.xx:x......x..:. 81M3D10M12I7M2D36M13D14M3D30M 127/178 71.3% 190/94230402 0.0% 33/178 18.5% 51867878 NA +9511 chr4 + 190214555 106251853 106251852 106252034 182 TCTTTATACATACCACACAAAGCTCAAATAAAATGATTCCAAGAGACCATACATCTGATTTGGGGCCAGAAGGCAATGGTTTTTTACTTGGCATGTGATCAGTGGTTTTGAAAATTCCCTGTGCAATTACCTCAGGGGCCAAGTACGAGGGATACCTGTAATGATACATTAAAATAATGAAA chr4 - 94230402 54384007 54384006 54384188 39846215 39846214 39846396 182 TCCTCTTACATACCACACAAAGCTCAAATAGTATTATGCCAAGAGACCAGAGATCTGATTTAGGGCCAGAAGGCAGAGGCTTCTCACACTGAGTATGATCACTTGGTTTGACCATTCCCTGCGCAATTACTTCAGGTGCCAGATAAGATGGGTACCTAGAAAAATGCAGTAACATTAAGTAA ..:.:x........................:x..x..x...........x.x.........:.............:x..:..:.:..x:x.x:.:......x.x.x.....xx........:........:.....x....::..x..x..:.....:x..x:..:..x...x..x.x.x.. 182M 138/182 75.8% 182/94230402 0.0% 0/182 0.0% 51867846 NA +6608 chr4 + 190214555 106260429 106260428 106260545 117 ATCCTTACCCTATTGGGAAATCAACATCATCACCATGAGCTGTCATGTGATAAAGTCCAAATTTAGCCAATTTAATATGTCCCT----------ATGATAAT-------AAAGAAAAAAAACACTATCAAATAA chr4 - 94230402 54384749 54384748 54384882 39845521 39845520 39845654 134 ATTCTTACCCTATAGGAAAATCAACATCAACACCCTGAGCAGTCATATGGTAAAGTCCAAATTTAGCCAACTTGACGTGTCCCTGAAGAGGAGAATAATAATTAAAAACAAACAAACAAAACACTAAAAAAAAA ..:..........x..:............x....x.....x.....:..:....................:..:.::.......----------..:.....-------...x...x.........xx...x.. 84M10I8M7I25M 99/117 84.6% 134/94230402 0.0% 17/117 14.5% 51875680 NA +7938 chr4 + 190214555 106262095 106262094 106262261 167 TACCTTTCGGTCCAACAGGATATTATGAGGAGACAATGCCCTGTGTACTATACCATGTTTGTTCATATACTGCAAGCCCTGAAGAACCTCAAATGCTATACACAAAACCGTTGAACAGCTACAAAGAAAACAAAAAGTCAAAGATCAATTACAAAGCAAATAAATAA chr4 - 94230402 54386363 54386362 54386529 39843874 39843873 39844040 167 TACCTTTCGATCCAAAAGTATATTGCGAGGGGAGAGTGCTCGGTGGACCATTCCATGTTTGTTCATATACTGCAAACCTTGCAGAACCTCGTATGCAATGCACAAAATCCTTGAGGAACTGAAAATAAAAGAGAAGAACATAAAAAATGTGCACAACAGCAAAATGA .........:.....x..x.....::....:..x.:...:.x...x..:..x.......................:..:..x........:x....x..:.......:.x....:x.:..:x...x....x.:..::x..x.:.xx.xx.:..x.:..:xx....:. 167M 121/167 72.5% 167/94230402 0.0% 0/167 0.0% 51875732 NA +10156 chr4 + 190214555 106284363 106284362 106284695 333 TCAGTGAGTAGGCAATGTTTTAACAGGGGAAAATAAAACT-CACTAATTTGAGTAAGTCAGATCATGTTTTCCATCAGGCTAGTAAACAGCTGCAGACATAGTCTGCTTCCCATCAAAGTCTTCACGTATAAC--------TTCTGCAATACTAATGGTATTCTGGTAAATTTTCAAAACCATAACCCTAAAAACGTGACAAACTACATTTTGTT----AAAGGAATATGGCTCTACTGCCCACCCTGCATTCACCTGCAAACTTAACA-CAATGTAGAAACTCTATTACAAGTGCCAAAACTCTGCTGAATATCTGTCCATGAGCTACATTTGCTGATACTTTCAT chr4 - 94230402 54399127 54399126 54399449 39830954 39830953 39831276 323 TCGATGCGCAGACAACTGTTTAATACAGTCAAATAAAAATGTAGTCATCCGAATCAGTCAGCTCATGTTTTCT-CCAAACTAGTAAACAGCTGTGGACACGGCCTGCATCCAATCAAATGTTGCATGCGTAACAAACTGTACCTTGCATCTCTTATGGTTCACTAGTAATTTTTGAAAACCCTGACTTTCAGAACATA--CGACTATATTTTATTGAAGAAAGGAATAAGCATAGACTGCCCA----------AGCCGCAAATTGAAAACCAATTCAGAAACTCAACTATAGGTGCCAAAAGTCTGCTGAATGTCACT-----------ATTTGCTGGCATTTTTAT ..::..x.:..:...:xx.....:.x:.xx........x.-:.x.x..::..:.x......x..........:-:..::..............::....::.:....x...x......xx:.x..:.::....--------:::....x:x..x.....x:x..:....x....x......x.:..::.x.:...:.:--x:....:.....:..----.........x.xx.xx........----------.x.:.....:.x..x.-....x:........x.:..:.:.........x..........:..xx.-----------........::.:...:.. 40M1I32M1D59M8I57M2D15M4I24M10D16M1I48M11D18M 220/309 71.2% 323/94230402 0.0% 38/309 12.3% 51885236 NA +5364 chr4 + 190214555 106295085 106295084 106295185 101 ATACAGTACCTCACAGGTTTCCTTTCTCGAAGCAAGTCTTCCAGACTACGTTCACAATGTTCAGCCACGACCACTAGTCGTTCTGAGAAAAACAAAGCAAA chr4 - 94230402 54403386 54403385 54403486 39826917 39826916 39827017 101 ACACCTTACCTGACTGGTTTTCCCTCTCGTAGCAAATCTTCCAGACTATTTTCACAGTGTTCAGCAGCCACAACCAGTCTCTCTAAGAAGAAAAAAAGAAA .:..xx.....x..x.....:.::.....x.....:............:x......:........x:.x..x..:....x:...:....:..x...:x... 101M 76/101 75.2% 101/94230402 0.0% 0/101 0.0% 51891699 NA +13929 chr4 + 190214555 106308762 106308761 106308963 202 ACTTACCATGCTTTCCCCTAGAAATATCCACATACTGGCAGAGTCTGGGATGGGTGATGGTTTTAAGGATTTGAAAGCGCCCTAAAATTTTGATGGAATTTGGTGTGAGAGGAAGTCCATTGCTTCCACAAACATCATGTGGCAGAGCCGAGGCAAAGAAGGTAAAGGCTCCCATTTCAGCGTCCTTCAGGGGAAACATTTT chr4 - 94230402 54405605 54405604 54405806 39824597 39824596 39824798 202 ACTCACCATGTTTACCTCTGGTAATATCAACATACTGGCAAAGTCTAGGATGGGTGATTGTTTTAAGGATTTGAAACCTCCCTAGAATTTTGATGGAGTTGGGTGTCAGAGGGAGGCCATTACTTCCACAGACATCATGTGGAAGAGCCGAGGCAAAGAAGGTGGAAGCACCCATCTCAGTATCTCTTAAAGGAAACATCTT ...:......:..x..:..:.x......x...........:.....:...........x.................x.x.....:............:..x.....x.....:..x.....:........:...........x....................::.:..x.....:....::..::.:.::........:.. 202M 168/202 83.2% 202/94230402 0.0% 0/202 0.0% 51903157 NA +10291 chr4 + 190214555 106324747 106324746 106325160 414 TGTTTTCTGCATTTAAGAACAAACTATATTTCCTCTTCT-----------AAGTAGAT-TCAGGAATTAG--TCTACTTAACATTTCTGCTATTTGTTTGGCTTGTTGCTCTCCATAGGAAAACTATTTTTCTAAGATATTTATCTATTACAGTAGAAAATGTTTTTCCTTTCAGACTGCTTTTTCATA-GTGGCCTATAGTATAA--------ATTTATTCCTTTC----ACAGTGTAATTTATCACT-TTTATTTTTCCTATAGGATTTTCTGCCGTCTCTTGGCAAAAATGGCAAATAATGATGCTGTTCTGAAGAGACTGGAGCAGAAGGGTGCAGAGGCAGATCAAATCATTGAATATCTTAAGCAGCAAGTTTCTCTACTTAAGGAGAAAGCAAGTAAGAAAAT-----TTA----AAATTTTTTGAGGAGATACTTAAAATGAA chr4 - 94230402 54430140 54430139 54430569 39799834 39799833 39800263 430 TGTTTTCTGCACT--AGGAAGAAGTGTTGCTTTTTTTCTGAAATACTTAAAAGCAGCTGTCAAACATCAGATTCTGTTTAATATT---ACTTTTTGTTTGG------GCTTTGCATTAGGAGG---------TAGAAGCCCAGTTTGTTCAAATAGCAGATTTCCTTACTTAGCAACTGGTTTTAGATCTGTTTCCTGTAGTAAGAGATGGGACATTAATTATATTAGGAAATAAT-TAATTTGAAACTGTCTGTTATTTGTCTAGGTTTTTAGCCCGTTTCTTGATGAAGATGGCAGCTAACAATGCAGTGCTGAACAGACTGGAGCAGAAGGGTGCAGAGGCTGATCAAGTTATTGAATACCTCAAACAGCAAATTGCTCTACTCAAAGAGAAAGCTAGTAAGGAATTCGCTCTTGTGATAAACTTGTTAACCAGATGGTTAAAATTAA ...........:.--..:.x:..x.:.xx:.::.:....-----------...:..x.-...::x..:..--...::....:...---:..x.........------...:.x...x:.:.::---------..::.xx::x:.:.:..xx.:...x.:..x.::..x...xxx:....x....xx..x-..xx...:.....x:.--------...x...x:x..x----.:.:.-......:xx...-.:.:..x..:x.x....x....xxx....:.....:::..:......:x...::....x..x.....x..........................x......:.:........:..:..:......:..x.......:..:........x......:..x.-----..:----...:..x..:.xx....:x.......x.. 13M2D24M11I8M1I11M2I13M3D13M6D16M9D57M1I16M8I13M4I5M1D12M1I160M5I3M4I29M 277/393 70.5% 430/94230402 0.0% 58/393 14.8% 51894607 NA +8532 chr4 + 190214555 106327402 106327401 106327566 165 ACAAAACCTCTTTTAA---------AAACA-----TATTTTAACTGGATGTTCTTGA------------TCCTAGTTTTGCAGGCAACTTTGAGGGAAGAGAAGAAACTTCGAGTTGAAAATGCTAAACTGAAGAAAGAAATTGAAGAACTGAAACAAGAGCTAATTCAGGCAGAAATTCAAAATGGAGGT chr4 - 94230402 54431166 54431165 54431356 39799047 39799046 39799237 191 ACAAAACCTCTGTTTATCAAGTGGTAAATGCTAATTATTCAAACCTATTGTTTTTAACACTTTGTGAACTTCTAGTCTTGCAGGCATCGCTCCGAGAAGAGAAGAAGCTCCGTGTGGAAAATGCAAAACTGAAGAAAGAAATTGAAGGGCTGAAACAGGAGCTGATTCAGGCTGAAATTCGAAATGGAGGT ...........x..x.---------...::-----....:x...:x:x....:..:.------------.:.....:.........x.x:.xx.:...........:..:..x..x........x......................::........:.....:........x.......:.......... 16M9I5M5I22M12I122M 134/165 81.2% 191/94230402 0.0% 26/165 15.8% 51896236 NA +13060 chr4 + 190214555 106331669 106331668 106331886 218 TAGGAGAGAAGAAGGAGAAAAAACAGCAATCAATAGCTGGAAGTGCCGACTCTAAGCCAATAGATGTTTCCCGTCTGGATCTTCGAATTGGTTGCATCATAACTGCTAGAAAACACCCTGATGCAGATTCTTTGTATGTGGAAGAAGTAGATGTCGGAGAAATAGCCCCAAGGACAGTTGTCAGTGGCCTGGTGAATCATGTTCCTCTTGAACAGGTA chr4 - 94230402 54435126 54435125 54435343 39795060 39795059 39795277 218 TAGGTGATAAGAAGGAGAAGAAACAGCAGCCAGTTGCTGGAAGTAGTGATTCAAAACCTGTAGATGTATCTCGTCTGGATCTTCGTGTTGGCTGCATTATTACAGCTGAAAAGCACCCGGATGCAGACTCATTGTATGTTGAAAAGGTGGATGTTGGAGAAGCGAGCCCAAGGACTGTTGTCAGTGGTTTAGTGAAATATGTTCCCCTGGATCAGGTA ....x..x...........:........::..:.x.........:x:..:..x..:..x:.......x..:..............x:....:.....:..x..x...::...:.....x........:..x........x...:.:..:.....:......::::x.........x...........::.:.....x:.......:..x..x...... 218M 170/218 78.0% 218/94230402 0.0% 0/218 0.0% 51896543 NA +11709 chr4 + 190214555 106336854 106336853 106337044 191 TTATATTTCACACAGATGCAAAATCGGATGGTGATTTTACTTTGTAACCTGAAACCTGCAAAGATGAGGGGAGTATTATCTCAAGCAATGGTCATGTGTGCTAGTTCACCAGAGAAAATTGAAATCTTGGCTCCTCCAAATGGGTCTGTTCCTGGAGACAGAATTACTTTTGATGCTTTCCCAGGTAGGTA chr4 - 94230402 54436974 54436973 54437164 39793239 39793238 39793429 191 TTTTCCTTCCCCAAGATGCAGAATCGGATGGCAGTACTGCTCTGTAACTTGAAGCCTGCAAAGATGAGAGGAGTAGTATCTCAAGCAATGGTGATGTGTGCCAGCTCCCCAGAAAAAGTGGAAATTCTGGCTCCCCCAGTTGGGGCGGTACCTGGGGACAGAATCACTTTTGAAGGTTTTCCAGGTAAGCA ..x.x:...x.xx.......:..........:::.x:.:..:......:....:..............:......x................x........:..:..x.....:...:.x.....::.......:...:x....x.x..x.....:........:........x.x...:.......:.:. 191M 151/191 79.1% 191/94230402 0.0% 0/191 0.0% 51899880 NA +12372 chr4 + 190214555 106347389 106347388 106347693 305 AATGTTAAAAGTTTGATT---AGGTCCAAAAATCAGAAAATGTTGCC-------AAAACAATTCACTGGAAATCTCTGTGAATAGTCTCTTTAATATTTTTGTATAT-TAGCTGTGTAATTTTCTTGTGC-------------------TTTTTTTCTCCTACACAGGAGAGCCTGACAAGGAGCTGAATCCTAAGAAGAAGATTTGGGAGCAGATCCAGCCTGATCTTCACACTAATGATGAGTGTGTGGCTACATACAAAGGAGTTCCCTTTGAGGTGAAAGGGAAGGGAGTATGTAGGGCTCAAACCATGAGCAACAGTGGAATCAAATAAA chr4 - 94230402 54442306 54442305 54442633 39787770 39787769 39788097 328 AAAGTTAAAGGTTTTGTTTTGAGACTCA-----CAGGTAATATTTCTTTCCCTTAAAAAATTGTACAGAGAATCTATGTGAGC--TCTCACTAATGTGTGCTCATATAGAGCTCTTGCTATTTCTTATGTGTTGTGTGCTATTAGGTTATTCTTTGTTTTGAAATAGGAGATCCTGAGAAGGAACTTAATCCCAAGAAGAAGATGTGGGAGCAAATCCAACCTGATCTTCATACCAACGACCAGTGTGTTGCTACATACAAAGGAGTTCCATTTGAAGTGAAAGGGAAAGGAGTTTGCAGGGCAGAGACCATGGCAAACAGTGGAATTAAATAAA ..x......:....x:..---..:::..-----...:x...:..x.:-------....x.x.x:..x.::.....x.....::--....x:....:.x.x:x:....-x....x.xxxxx......:..:-------------------..:...x:.::x.x.:......x.....x.....:..x.....:...........x........:.....:...........:..:..:..:x.......x....................x.....:...........:.....x..:.....xx.:......:xx...........:....... 18M3I7M5D14M7I29M2D22M1I22M19I186M 225/298 75.5% 328/94230402 0.0% 37/298 12.4% 51905083 NA +3100 chr4 + 190214555 106349997 106349996 106350053 57 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTTAGTT chr4 - 94230402 1220214 1220213 1220270 93010133 93010132 93010189 57 TCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAAGTCCCAGTT ......:::x.............x....x....x...:...x.:.:..:..::.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 105129783 85084772 +4003 chr4 + 190214555 106362571 106362570 106362668 98 TGTTCATTTTCCCAGGACCTCACCAGC---CCTGCCCCATTTGTTTGTGGTTGATGAAATCATAGCATCTGGACTTTTTAGGGTGAAACAAACAAACAAAA chr4 - 94230402 54445904 54445903 54446004 39784399 39784398 39784499 101 TGATCATAATCCCAGCACTCAGACAGCTGTCCTGCCCCATTTGTTTGTGGCTGATGTAATCATAGCATGATAGTCTTTTAAGGAGATAATAACTAAAATAA ..x....xx......x..::x:x....---....................:.....x...........xxx::::.....:..x..x.xx...x..x.x.. 27M3I71M 72/98 73.5% 101/94230402 0.0% 3/98 3.1% 51916667 NA +15376 chr4 + 190214555 106367037 106367036 106367435 399 TATTACCTGGATCATCTGGACTG---GGTCAGTTACTTCCTGCCCACAGAAAGGCACATCTGCTCTCTGAACCAGGAGTGCAAGGTGGAGACCCCCTTGCCCGAAGTGATGTGCCAGAGCCTCTTTGACTTCCTGTTTCACATACTTCTTGCTCAGCCTGCTGTGTGGATAACCTGGAGTGTCCAACACCTGGACCTGCAGGGCTACCTCTAGCCCACCTCGACGCATGAAGCTGTGGAGGTGACAACTGCGGCCCAGGCTACAACATGTGGTCACAGAACAGGGAGCAAAGCTGCTGTGAAAGTCTGTGCTTCCCAGCAGAATGTTTCCAGCAGAACTTTTTCCACTCTGAGTCATGCCAAAGAGGGCCAAGTTGATGATCATCTTGTTGGGGTCTGTCAT chr4 - 94230402 54446919 54446918 54447317 39783086 39783085 39783484 399 TGTTACCTGGATGAACTGAACTGTTTGATCATTTTCATCTGG---ACACAGAGGTAAGTCAGCCCTCAGGACCAAAAGAGCAAGATGCAGACCTTCCTCCCTGAAGTGGTGAGCCAGGGCAGATCTCACTGTGTGTTTCACCTGCTCTTTGCTCAGGCTGCTGTGAGGGTAGCTTGGAGTGTCAAGTACCCGAATGCGGAGAGCTAGCTCACAGCCATTTCTTCGTGTAATCCCCAGAATACGGCAGCTGTGCCCAAGGCTGCAGCAAGTGGTCACTGAGCTCGGGGAAAGATGGCTTTCAAAGTCCAAGCTGCCTAGCAGGCTGTTCCCAGCAGCGCTTTTGCCAGTCTGAGTTCTTCCAAGGACAACAAGGTTGATTGTCATCTCATTGCTGTCTGCCAT .:..........x.x...:....---.:...x..x.x..:x.---...x.:...:.x:..x..:...x.:....::..x.....:..x.....::.:.x..:......:..x.....:..xxx.:.x...x:x........x.:..::........x........x..:..:.:.........x.::...:.:.:x:.x..:....x...xx:x...::..xx..::.:.xx.:xx.:.x::.:..:...:.x..x.....:..:..x........x..:.xx..:.x..:::x...x.x......::x...x..:.....:x....:.......x:.....x...x.......:x.x....:..x::.x.:......x:......::...xx.....:... 23M3I16M3D357M 268/396 67.7% 399/94230402 0.0% 6/396 1.5% 51920118 NA +3293 chr4 + 190214555 106371519 106371518 106371575 57 TGTTCATGATGTTTTTGTTTGGTTTTGTTCTTCTTGTTTGCTTGCTTGTTTGTTTTT chr4 - 94230402 51070715 51070714 51070771 43159632 43159631 43159688 57 TATTTGTTGTGTTTTTGTTTTGTTTTGTTTTTCTCATTTATTTGATTATTTGCTTTT .:..::.x:...........x........:....::...::...x..:....:.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 55300804 NA +3089 chr4 + 190214555 106376207 106376206 106376289 83 ACACACACACATATATGTTTTATATATATACACACATATATGTTTTATATATATATATATACACACACACTCACACACACACA chr4 - 94230402 21908427 21908426 21908509 72321894 72321893 72321976 83 ACAAATCTACATTTTTTTCTGAAATATATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACA ...x.:x:....x.x.x.:.x.x.......:xx.x..:..x:.:xx........:....:..........x....:xx..... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 84467780 NA +3136 chr4 + 190214555 106376262 106376261 106376322 61 TATATACACACACACTCACACACACACACACACATATATATGTATATATATTTTTTTGGAG chr4 - 94230402 87372741 87372740 87372801 6857602 6857601 6857662 61 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAG ...x.x..x......x....x.........:x:...::......::.....x...:.x... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 19003521 NA +3567 chr4 + 190214555 106395944 106395943 106396026 83 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCAGAGTAGCTGAGACTACAGGCATGCACCGCCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::..........x...x..x.x........::x:........::......--.:......:.::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 88198818 NA +4218 chr4 + 190214555 106399441 106399440 106399680 240 ATGTATGTTCTGAAAATCACAATGCATACAAATGTGAAGAGGTTCA-TGTAAGTTGAATAATAATAATAATAATGAGTAACATTTATG--------TATTGCATACTATGTGGCAGGCACTCTTCTAGGCACTTGCCCATAT-TAAACCATTTAATCCTTAAAACAATCTTATAAGGTAGATA-TTACTATTACTTCCATTTTACATGTGAGAAAATGGAAGCACAGAGAGATAAGGTAACATGTTCAAGG chr4 - 94230402 10729021 10729020 10729260 83501143 83501142 83501382 240 ATGGatatttttaaatttata-----tataattGTGGTTGGTTTCAGTACTCTTTAAATAACAACAATCATTATAAGTAAAATAAAGAAGCAAGACTACTA-ATATTATGTA-----CTCACTCTGAAGATCCTGAATAAACAGGAATTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG ...x..:..:.x...x.:.:.-----..:..x....:xx:.x....-.::xxx..:.....:..:...x..x..:.....x..xx.x:--------..:.:-...:.....:-----.x.x..::x.:.xx.:..xx:.x.:-x:..:::x..x.x...:.x..:.x:.:.:.:......:..-.......:.x:...........x...:.....:x..:.....x.x..:.x.:....:x..::..::. 21M5D20M1I41M8I5M1D10M5D25M1I40M1I67M 145/229 63.3% 240/94230402 0.0% 22/229 9.6% 95670420 NA +11160 chr4 + 190214555 106411348 106411347 106411670 323 AATGATACATAGATTTTTTTTCCTCTC--AGGCCCAATGCTGTCTCATTTT-CTGAATACACTAAAAAATGTTATTTCAGATATGCAAAATCAGAAACATGTGCTTTGAGGCTAATCATATTGTAGTTCTGTGAGGTCAGACTCTACATAAAACTTGGCTAATTTAAAATGAAAGACTCTACATAAAA-CTTGGCTAATTAAAAATGAAATAGAAGCAGCTGTTGTAAAGAATGCAGTATATAAGCTCCCATTTAAAGTTATATTGTATTTTTCTTATTAATTTTAATTGTGTGTTTTGAGAGAAAGAA-----TTTATTAAAGACATAAAA chr4 - 94230402 54460117 54460116 54460418 39769985 39769984 39770286 302 AAGGACACTCAGACTTTTATTTTTCCTGAAAGTT---TGCATTCTCATTTCACTCACTTTCACAAAGAATGTTACCTCAGAAACATTAAATGGAAAACATGTGCTTCAAGGCTAATGGTATTGCTGCTTTGTATGGTCAGCTCC---------------------------AAATTCTCAACATAAAGGCTTTGTTAATCTAAAGTGAAATAAAAGCAGCTGTCATAAAGCATGTGATATATAAGCTCTCATTTATAGTTGTATTATATTTCTCTTATTATTTTTAATAGTCTGAACTGAGAGAGAGAAAAATGTTTATTGAAACGATAAAA ..x..:..x:...:....x..::..::--.:.::---...xx........:-..x.x.x:xx:...:.......::.....x.:::x....x::............::........x:.....:x.:.:...:x......x::.---------------------------...xx...x.......:-...x.:....:x...:.......:..........::.....x...:::...........:......x....:....:.....:........x.......x..x..xx:.......:....-----......:..:xx...... 27M2I5M3D14M1I92M27D17M1I120M5I18M 214/293 73.0% 302/94230402 0.0% 39/293 13.3% 51951231 NA +4027 chr4 + 190214555 106429821 106429820 106430015 195 TGGAAGTATGGTTTCAATTTTTCATTGAAATTACA-ATCAAACAA-ATTGCCAGCACACATTTTTCTCTGTCAGA---------TGTTTCCCTTATGACAGATTTGGAGTACCTTGGGCCAGCTTATAAACCTTGTCCTCTGCCAGTGTTGCTACAGACTCTTCTCTTTGTTTTCAAATAAATTTCACTTTTTTCTCCAACTGGTG chr4 - 94230402 20640558 20640557 20640746 73589657 73589656 73589845 189 TGGGAATATAATTTCAATTATTCCCTGGAAACATGGATCAAGCACTGTTGTCAACACATACTTT-ATCTTTCAAAATACTGTGTTGTTCCC----------------AATGTCTGTAGAAAGTACAAAAAATAGGGCTTCTGCCAAAGTTGCTACACCAGTGTCTCATTACTTTCAAATTAATTTTACTTTTGTTCAGAACTGATG ...:.:...::........x...x:..:..x:.::-.....:..x-:...:..:....:.:...-x...x...:.---------....:..----------------.:.::..xx:.xx..:x:.x...x:xx.x.:.......:x.........xxxx:x....x..::........x.....:......x.::xx.....:.. 35M1I9M1I18M1D10M9I7M16D99M 118/178 66.3% 189/94230402 0.0% 28/178 15.7% 85789263 NA +3204 chr4 + 190214555 106441186 106441185 106441237 52 AAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 19704278 19704277 19704329 74526074 74526073 74526125 52 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT .....:.......::.......x.....:...x::...........:.:x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 86736908 NA +3074 chr4 + 190214555 106441189 106441188 106441251 63 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATAT-----------ATAATGAAACAT chr4 - 94230402 48089497 48089496 48089570 46140833 46140832 46140906 74 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACAT .:..x:.x.:......:.::.......:....x.x................-----------...:..x..... 51M11I12M 50/63 79.4% 74/94230402 0.0% 11/63 17.5% 58351692 NA +3245 chr4 + 190214555 106441190 106441189 106441248 59 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAATGAAA chr4 - 94230402 4406423 4406422 4406481 89823922 89823921 89823980 59 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGTCAGAAAA ...::........xx....x..................:.x:.......x:.x.x:... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 102034767 88179788 +3467 chr4 + 190214555 106441191 106441190 106441314 124 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAATGAAACATACAGCAACAGAAT-ACATTAAGTATAATGTTTCTAAGAGAATTC--ATTAGCAGATCTGTACCATT chr4 - 94230402 48089497 48089496 48089618 46140785 46140784 46140906 122 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-----TACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAAACTGTACCACT .:..x:.x.:......:.:........:....x.x......:.........-----x...:.x.::..:..x:.-.....x.x.::...::x.:.:.:x.x.:x.--..:x.:.:.x........:. 51M5D18M1I30M2I20M 80/119 67.2% 122/94230402 0.0% 8/119 6.7% 58351694 NA +3183 chr4 + 190214555 106441194 106441193 106441243 50 ATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATAA chr4 - 94230402 4406423 4406422 4406472 89823931 89823930 89823980 50 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAA ...::........xx.:.:x....................x:........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 102034771 88179784 +3007 chr4 + 190214555 106441213 106441212 106441250 38 TGTGTGTGTGTGTGTGTGTATATATATATAATGAAACA chr4 - 94230402 57888795 57888794 57888832 36341571 36341570 36341608 38 TGTGTGTGTGTGTTTGTGTATATATATTTAATGAAGCA .............x.............x.......:.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 48552418 NA +3823 chr4 + 190214555 106443278 106443277 106443449 172 TTCTCTTCTCTTTCTCTC---TTTCTCTTTCTTTCTTTCTTCTTTCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCTTTTCTTT chr4 - 94230402 45185595 45185594 45185751 49044652 49044651 49044808 157 TTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACT---------CTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCT---------AATCTCTTATTCTTTTCTCTTTAATCTTTT ...:..::..:.xx....---.....x:...x.........:.:.:.:x:..:.:x....:....:...:..xx:.---------.:.....::...x..:xx.x.:.:..x:.x...x.......xx::x:.:..---------xx......x.........:..:xx.::... 18M3I55M9D51M9D30M 100/154 64.9% 157/94230402 0.0% 21/154 13.6% 61257683 NA +3271 chr4 + 190214555 106443284 106443283 106443433 150 TCTCTTTCTCTCTTTCTCTTTCTTTCTTTCTTCTTTCTTCCTTC--------TTTCCTTCCTTCCTTCC--TTCCTTCCTTCCTTCCCTCCCTCCCTCTCTCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTT chr4 - 94230402 38122953 38122952 38123112 56107291 56107290 56107450 160 TCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCT ..x.......::..:..x.......:...::.x:....x.x:..--------.:xx.:.x..::x....--..:::....:x..x::....::.x:x....:.:x.:x.x.:..::x.x.x......:.:::x...:..:....:x:.x.x:.:..:.:. 44M8I17M2I89M 88/150 58.7% 160/94230402 0.0% 10/150 6.7% 68320331 NA +3422 chr4 + 190214555 106443335 106443334 106443471 137 CCTTCCTTCCTTCCTTCCTTCCTTCC--CTCCCTCCCTCTCTCCCTCCCTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTCTCTTTTTCTCT chr4 - 94230402 43081887 43081886 43082022 51148381 51148380 51148516 136 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTC---TCTCTCTCTCTCTGTAGCTTCTTCTTT ...:..:xx.x:x..:.........x--..:.xxxx:x..x.......:....:...:......:..x.::..:x.x..:.x..::xx....xxx:....x..::....---...:.:...:.:.x.xx...:....:. 26M2I81M3D27M 85/134 63.4% 136/94230402 0.0% 5/134 3.7% 63361448 NA +3172 chr4 + 190214555 106443381 106443380 106443453 73 CTTTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCTTTTCTTTTTCT chr4 - 94230402 20485339 20485338 20485411 73744992 73744991 73745064 73 CTTTCTATTCTTTTGTTTTTATTTCTCTCTCTCCATCTACAATCCATCTTCCCTGTTTTGTTTTTTTTTTTCT ......x.......x...:.x.........:..:x...x:xx::.x.:...::.x:...x:....:....... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 85958042 NA +3084 chr4 + 190214555 106443383 106443382 106443465 83 TTCTTTTCTTTTCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTTTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTCTCTTT chr4 - 94230402 51995566 51995565 51995648 42234755 42234754 42234837 83 TTGTTTTATCTACTTTCCCTGTTTCTTATTAATCTTGCTTCACTTTTTTTTTATTTTTCTTTTTTCTTTAATTACTTTGCTTT ..x....x.:.x.....:..x.:...:x..xx.::.x:...x......:...x:.........:.:...xx..x:..:x.... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 54447817 NA +3222 chr4 + 190214555 106452186 106452185 106452268 83 CTGCAGCCTTGGTTGCCTGGGTTCAAGTAATCCTCCCACCTCAGCCTTCCAAGTAGCTAGGACTACAGGCATTTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x::x:x:............:x.:.x.xx:x.........:.........:.:......--.:.x::....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 88255060 NA +3124 chr4 + 190214555 106456159 106456158 106456233 75 AAGATATATATATATATATATATATATGTATATACTTATACATACATACACACAAACACACACATACACACACAC chr4 - 94230402 24136190 24136189 24136262 70094141 70094140 70094213 73 AGAATGTGCATATATATTTATGGAACTGTTTATA--TACATATACATACAAACAAACAAACACACATATTTACAC .::..:.::........x...:x.xx...x....--..:.:.........x.......x.....:.:.:x:.... 34M2D39M 53/73 72.6% 73/94230402 0.0% 2/73 2.7% 82319969 NA +3602 chr4 + 190214555 106456159 106456158 106456229 71 AAGATATATATATATATATATATATATGTATATACTTATACATACATACACACAAACACACACATACACAC chr4 - 94230402 24136192 24136191 24136262 70094141 70094140 70094211 71 AATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..x:.::........x...:x.xx.:.x.......x..........x...x...........:..x:.... 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 82319967 NA +3078 chr4 + 190214555 106477969 106477968 106478011 43 TTTTGTTGTTGTTTTTTTGTTTGCTTGTTTGTTTTTTGAAGGA chr4 - 94230402 16806169 16806168 16806211 77424192 77424191 77424234 43 TTTTTATGTTGTTTTTTTGTTTGCTTGTTTACTTTTTGGAAGA ....xx........................::......:.:.. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 89671800 NA +5984 chr4 + 190214555 106495451 106495450 106495744 294 GATAGGCAAGGCTATGCAGAAATAGCGAACATACGAAATGCAAACTGGCTACTTTTAGTGTTTCACAAGAACTTGTAAA---------GATGCCTGAAAAG---CACACAAAAAATGC--------TCCTTTTAGTGTTTTTATGGGGATAGCTT-AAGGTTGTTTTC-------AAAGTTTTGAGATCCAAATGCAAAGGACTTCACTGTTTTACAAGTGGTTTAATCCCATGGGTAGTGTGGTTATAATCCAGATGAGCCTCTTGAGGGGCAGAAAGTAGCTGTGCCAATTTTTTTGTGTGTGTTGAAAGGACCATAAAG chr4 - 94230402 54480476 54480475 54480780 39749623 39749622 39749927 305 GAAAAGCAAGACTCTTGAAACATATTGAAAATATAA---GCAAAC------CATTCTTTCCCTCTGAAGAACTTGTAAATTTCAGTATGGGTCTTGAGAAAAGCCACACAAAAGCTTTATTTTTTTTCTTTTTAAT--TTTAATGAGGCTAGTTTTAAAGTTGTTTTCTTTAAATAAAGAAAGAAAA--CTAATAAAAAGGAATCT--TTCTTTACAAGTGGTTTAATCCCACTGCTAGAGAGGATATAATCCAGATGACTCTCTCAGGGGATACAAGG-ACATTTGCCAGTGTTCCTGTAT-TGCTGAAAGATTCACCAGG ..x.:.....:..x.xx.:.x...x:...x...::.---......------.x..:xx.x::..xx.............---------.:xx.:...:..:---.........:x.x:--------..:.....:.--...x...:..x...:..-..:.........-------....xxxx:.:.--.x...:x......x.::--.x:.....................:x.x...x.x..x..............x:....:::...::.x..:.-.xx.x.....:.x..::...:.-..:......:x:..:x.:. 36M3D6M6D28M9I13M3I14M8I10M2D17M1I12M7I12M2D17M2D71M1D22M1D19M 194/277 70.0% 305/94230402 0.0% 45/277 16.2% 52014975 NA +3090 chr4 + 190214555 106498310 106498309 106498359 50 AAAAAAAAAAAAAATGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 32070080 32070079 32070129 62160274 62160273 62160323 50 AAAAAAAAAGAAAATACGCTTCTTTTCTTTCTTTTTCTTTATTACTTTCT .........:.....:.x........:...:.....:...x..x:...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 74428230 NA +3090 chr4 + 190214555 106498310 106498309 106498359 50 AAAAAAAAAAAAAATGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 32068332 32068331 32068381 62162022 62162021 62162071 50 AAAAAAAAAGAAAATACGCTTCTTTTCTTTCTTTTTCTTTATTACTTTCT .........:.....:.x........:...:.....:...x..x:...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 74429978 NA +3219 chr4 + 190214555 106498310 106498309 106498361 52 AAAAAAAAAAAAAATGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 86453179 86453178 86453230 7777173 7777172 7777224 52 AAAAAAAAAAAAATTGAACTTCTCTTATGTTTCTTCTTCTTTTTTTTTTTTT .............x..xx.....:..x.x...:..:..:............. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 20045131 NA +3090 chr4 + 190214555 106507601 106507600 106507700 100 TATCAAAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGAAGGAAGAGGAAGAAGAAGAAGAAGAGACAAGAGG chr4 - 94230402 93153848 93153847 93153947 1076456 1076455 1076555 100 TACCAAAAGTAGAGGATGAGGAAAAGCAGCGGTTGAAAAGACCGGAGGGGGGCGGGGAGGGGAATAAAAAAGGGTGGGGATACCAGAAAAAGTGTAGAGG ..:......x......x......:..x..x:.xx.:.:::.xx...:.:..:x.:.....:.:.x..::...:.x::.:.x.xx.::..:..xxx..... 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 13353753 NA +8179 chr4 + 190214555 106530771 106530770 106530991 221 AAGTCATGTTAGAATCATTTTGCT-AAAATATCACATCTGTCTTACAGAAATTACAACAGAAAAGCAACAAGATT-----ACAAAATCATTTCAAAATAAATATTGTACCAACCTAATGGAAAAACATCTGTGCTGTTTTAGCTTATTACAGCAGTTTGTCATGACAATTTATAGATAAGTA-TGCAATTT--TTCTTAGATTTATTATTGGAAACTTCTACTTATAGGT chr4 - 94230402 54496932 54496931 54497159 39733244 39733243 39733471 228 AAATCAGTTTAAAGCCCTTTAGCCCAAGATATCACATCTGCATTACAGAAATTTCAACAGGAAAACAATATGatttaaaaaaaaaaaaaaatcaaaataaatattttGAAAACTTGGTGAAAAAACATCTGCAGT-TTTCAGACCATTACAGCAATTTGTCAGGA-GGGTCATGGAGAATTCTTGCATTTTTGTTCTTGAATTTATTATTGTTGTCTTTTATTTATAAAT ..:...xx...:.::.x...x..:-..:............:x...........x......:...:...:.x....-----.x....xx.xx..............x.:xx...:.::..:...........::x.-...:..x::.........:.......x..-::x.:..:..x..x.x-....x...--.....::...........xx:x...:..:.....::. 24M1I50M5I55M1D29M1D16M1I8M2I37M 161/219 73.5% 228/94230402 0.0% 11/219 5.0% 52033839 NA +3164 chr4 + 190214555 106534021 106534020 106534063 43 ATTTTTTTCCATTTTTATTCTTTTTTTTTTTTTTTTTTTTCTG chr4 - 94230402 88358314 88358313 88358356 5872047 5872046 5872089 43 ATTTTTTTCAACCTTAATTCTCTTTTTTTTTTTTTTTTTTCTG .........x.::..x.....:..................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 18175707 NA +3368 chr4 + 190214555 106548862 106548861 106548949 88 CCTCCC-----CTTCCCCTCCCTTCCCCTCCCCTCCACCCCTCCC-CTCCCCCTCCCCCTCCCCTCCCCTCCCCTTCCCTTTCCTTCCCTTCCC chr4 - 94230402 23891361 23891360 23891448 70338955 70338954 70339042 88 CCTCCCGGTTGCTTTCACTC---TCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTC---TTTCTTTTTTTCCCCTTCCC ......-----...:.x...---.....x....x.......:...-.:.......:::....:...x::..---..:.:...::.:........ 6M5I9M3D22M1I25M3D20M 64/82 78.0% 88/94230402 0.0% 12/82 14.6% 82657501 NA +3293 chr4 + 190214555 106548904 106548903 106548957 54 CCCCCTCCCCCTCCCCTCCCCTCCCCTTCCCTTTCCTTCCCTTCCCTTTCTTCT chr4 - 94230402 69899689 69899688 69899742 24330661 24330660 24330714 54 CCCTCTCCCCCTCTCCTCCTTTCCACTTCCCCTTTTGTTCCTTCTGTCTCTTCT ...:.........:.....::...x......:..::x.:.....:x.:...... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 36649215 NA +3356 chr4 + 190214555 106584070 106584069 106584145 76 CAGTTCCTAGCTGTGCTTCAGTTTGGTTTTGACTACAATTTTTGTGTGTTGTGAGGTGAAGAGAAAACTGAGAAAA chr4 - 94230402 37695474 37695473 37695549 56534854 56534853 56534929 76 CAGGGCTGAGCTGTTCTTTAGTCTGGTTCTGATTAAATTTTTTATGTGTCACAGGGTTAAAACAAAAACAAAAAAA ...xx.:x......x...:...:.....:...:..x.x.....:.....:::::...x..:.x....x::.:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 68888596 NA +3213 chr4 + 190214555 106589362 106589361 106589411 50 GAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAAGAAAGAAG chr4 - 94230402 82145331 82145330 82145380 12085023 12085022 12085072 50 GAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAG ....:.:......:....:.........::..x..:...:x....:.... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 24444031 NA +3009 chr4 + 190214555 106589374 106589373 106589433 60 AGAGAGAGAGAGAGAGAGAGAGAGACAGAAGAAAGAAGAAAGAGGGAGAACTACAATTTA chr4 - 94230402 89612015 89612014 89612074 4618329 4618328 4618388 60 AGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAGCCACAATATA ..:x..............::.....x.x...:x.x........:::.x.:.:.....x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 16977359 NA +18988 chr4 + 190214555 106599308 106599307 106600317 1010 TGTTGTTCCATTCAGTGATTCTCCAGACAACTATAAACTGAGATCTTATTTGGGATACTTTTCTGGCCATGCATCCCCTAGCAG----------CCTATACGGAAAAAATATTCAAATATTATAGGGCTAAAGGTCATCCCTCGTAAGTAGTGGACTTCAAATTCAAGAGTATACTTTGATTTTGACAGTTCATGCAATAGATTCCAAATGGAATATTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCGCCCAGGCTGGATCTCGGCTCACTGCAAGCCCCACCTCCTGGGTTCACGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACCAAGCCCGGCTAATTTTTTGTATGCAGATATTATTATGCAGTTTTGG---CAGAATGTCTTTCCACCATGGTCAGATAACTGAAAGTGACCAACAAAAGGAGGGTGATGTTGCAGAAAGAGAGAGAATTCTTTTATGTGTATGATTTCATGAGAAGAATAATTAGAGCATCACATATTTCAGAGTGACAGCCAAATAATACACATTGGGTGGAACTGCTTCTTATTTATCTTTCCAAGAGAACCTAAAATACAGATGTTACCAGTGTATTTACAATGAAAAAAATTCCTTCCTTGTAAACTAAATTAAAGCTGGACCATTGAGATCCATGAAGCTCATGTTATTTGTGGCTCAGTTTCTTTGGGCATTTTTTGTAAACATTTCCTAACCATTTTATGAGCTATGAAAATGGTTGGGGAAACTGC--AGCCACATAAAGGTGACATGCTAAGTATATTGCTGGAAAACATACAGCAAAGACAAGGAAACAGTGAATATCTTAAAAAATACTGTGATCCAAAGGGAGAGTTCTTCAAATTGTCTTCGTTAACCAGTAGGAATGCTTTTAAGGTTTCTCTTGTCACTGGCAATAAAAATTATTATTATTTTTTTAAAAGGTACAGATATACAGGCAAAGTGTTCCATTCATGTAGTTTCATTTTGTTACCATTTTA chr4 - 94230402 54511919 54511918 54512740 39717663 39717662 39718484 822 TGGTGCTCTTTCCAAACCTTCTCCAGAGAGCTGTTTACTGAGAGCTCATCTGTGACACTTTTCTGACTGTGTGTATCCAAACAGGCTGCTTGAACATGCATGAAGAAGCCAGGCTAAGCTTACAGGGCAGTAGGTTGAGCACCATTGGTCATGGGCTTTCAATGTGAGAGCACTCTCTTTGTTTGGTGGTTCATGTGTCAGGTTCCAGAAGGG--------------------------------TCTGTCGC----------------------------------------------------------------------------------------------------------------------------AGATGTTGCTGTGGTGTTTAAGACATAATATATCCTCCCAGCATGGTCAGATCACTGAAAGTGACCATCA----------GTTAGTGTATGTGGGGGGAAAACT----TGCATGTGTGATTTCATGAGGGAGGCAAGTCAACCATCACATGCTGGAGAAACCTGGCCAAGTAATATACGTAAAACTGGACTATGTCTCAGT-GCTTTCCCAAGAGGACCTGCC-TGCAGATGTTAGTGGGGCATTTGCAA-AAATGAAATCCCATCGAAGAGAACTAAATCAAAGCTGGACTGCTGAGA--CGTGAAGCTCAAGTTCTTTGTGGCACAGTTTCCTCAAGCAGTTTTTATAAATACTTCCTAACCCTTTTATGAGCTATGAAAACAGTTGGGGAAACTGTGGAGCCACAGAAGGGTCACATGCTAAGTACGTTGCTGGAAAATATTCAGTAAAGTTTA-GAACCAGCAATTCACT--GACAACATTATGAACCTTTGACAAACCTCGCTGCGTTGCCTT-----ATGTGTAGCTATTTTATTAAGACTTTTCT----ATGGGCA------------TTTATTTCTTTGAAGA----AAATACTCAGTGCACGAGTTATCTTCATTTTGTGTCATTTTAATATGATGCTA ..x..:..:x.:..:xxx.........x.:..:.xx.......x..:..:..x..:.........:.::..::.x:..x.:...----------.x.::.:.:.:..:x:.xx.x..xx...:.....x:x....::xx.x:.:.x:..x:...:...:x...x::....:.:x..:.xxx....:::.......::x:..:.....:.x..:--------------------------------........----------------------------------------------------------------------------------------------------------------------------....:..::.:..xx....x:.---:.:x..:..:.:...x...........x..............x..----------.x.:x..:.x:x:.:.:..:..:.----.:::...:............::::::..x.x:.x........::.xx...:xxx::.....:.....:..:.x::::x.:...::x...:.x.-:::..:.......:....:xx-.:.........x::.x.:....:...-:..x:....:..x..xxx.x:........:..........:::.....--.:.........x...x........x.......:.:::...x.....:....:.:.........x..................::.............:--.......x..:...x............::...........:..x...:....x:x.-...x...::.x.xx..--:.x..:.:.:...x..xxx.:x.:.x:..x:::x:...:...-----.:xx....xx..x:.x.....::..:...----.:x....------------x......:...:..::----.:...:x...xxx.x.x...x:x.....x.x..x.......:x..:x..x:.. 84M10I119M32D8M124D22M3I45M10D24M4D93M1D21M1D26M1D48M2D98M2I56M1D16M2D42M5D29M4D7M12D16M4D53M 537/807 66.5% 822/94230402 0.0% 218/807 27.0% 52087389 NA +3781 chr4 + 190214555 106622348 106622347 106622435 88 TACACATATATGTACACACACACACACATGCATATATATGTATGTGTGTGTGTGCATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ...::::..:::..:.........x.:..:.....x.x......::.....x........x:.:...:...x.x:x..x:.x.x.... 88M 60/88 68.2% 88/94230402 0.0% 0/88 0.0% 34992213 NA +3056 chr4 + 190214555 106622371 106622370 106622428 58 ACACATGCATATATATGTATGTGTGTGTGTGCATGTGTGTGTGTATGTGTGTGTGTGT chr4 - 94230402 19704280 19704279 19704337 74526066 74526065 74526123 58 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT .:....::...::...:...x.....:...x.............:..x:.x.xx.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 86918091 NA +3247 chr4 + 190214555 106634069 106634068 106634151 83 CTGCAACCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:.........:xx...x.xx..........::.:.........:.:....--.::x.:....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 88436943 NA +3013 chr4 + 190214555 106636058 106636057 106636100 43 AGGTATAAAAGCAAGCAAAAAACAAACAAACAAACAAAAACCT chr4 - 94230402 66233653 66233652 66233695 27996708 27996707 27996750 43 AAGCCTAGAAGAAAGAAAAAAACAAACAAACAAACAAAAACCT .:.:x..:...x...x........................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 40402405 NA +8960 chr4 + 190214555 106637944 106637943 106638256 313 TTTTATAAGAAAACTCATTGGGACAACAGGGCTTTAAACTTCACCTAGTTTATTCTGTATCTGGAGGCGTAACCAAAACT-TTATTATATAAAAGAATGAAGGAAATTGAAAACAGGGAATTGCAGAATGCCAACAAAATTATCATTCCTGTATACATAATATTTATAGTGCCAAATGCCAGTAGAAATTCCTTTTGC--ATTTTATTGTTGCCTAATTAATTGTGTCAGGAATTCTAAAGCAATTAGGAAGCAAAAAGGAAAGAGAAAAAAAGAAACTTTCCCATATGAACTTTAAAGTAGTTTTTTCCAATTCT chr4 - 94230402 54528702 54528701 54528948 39701455 39701454 39701701 247 TTTTACAAGAACAGCTATTAAGAGGA--AGGTCTCAAACTCGGTCCAATTTACCATGTATCCGGAGGCTTGACCAAAACTATTATTACATGAAAGAATGGAGGAAATTAAGAACAGGG------------------------------------------CCTTTGGAATACCAAATGCCAGTACAATTTTTTTTTCTTAATTTTCTGTCTGTCTAATTAATTCTGTCAGGAGTTTGAAAACAATTAGGCACTAAAAAGGAAAAAAGA-------------------------TTAAAATGGTCTTACCTAATTCT .....:.....x.x::...::..x:.--:..::.:.....:x::.:.:....::x......:......x.:.........-......:..:........:........:.:.......------------------------------------------:x...:x.:.:.............x..x..::....x:--.....x.xx:..:..........x........:..:x...:........x.x:..........:.::.-------------------------.....:.:..:..x:.:...... 26M2D52M1I37M42D38M2I68M25D23M 180/244 73.8% 247/94230402 0.0% 72/244 29.5% 52109242 NA +3495 chr4 + 190214555 106641408 106641407 106641500 93 ACCCTAAAA-CTTAAAGTATAATAAAAAAAAATTTAAAAAAAAA---CAAAAAAAAAAACAAAAAAAAG-AAACTTTCCCA------------------------ATGGTCTTCTCTTTGTT chr4 - 94230402 45107748 45107747 45107869 49122534 49122533 49122655 122 ACCATAAAATCTTCCAATATAATAAAAACAAATTTAAAGAAAAAGGGAAAAAAAAAAGAGAGAAGAAAGCAAACATTTCCACAGAGAATACATGCAGTTCCCAAGATGGTCTTCTATTTTTT ...x.....-...xx.:...........x.........:.....---x.........:.x.:..:....-....x..:...------------------------..........x...x.. 9M1I34M3I22M1I11M24I17M 78/93 83.9% 122/94230402 0.0% 29/93 31.2% 61533660 NA +3131 chr4 + 190214555 106641426 106641425 106641471 46 TAATAAAAAAAAATTTAAAAAAAAACAAAAAAAAAAACAAAAAAAA chr4 - 94230402 52634645 52634644 52634690 41595713 41595712 41595758 46 TAATAAAACCAGATTTAAAAAAAAACTGAAAAAAAAACCAAAAAAA ........xx.:..............x:..........x....... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 54006781 NA +8202 chr4 + 190214555 106662235 106662234 106662417 183 TGACAGCCATAGGTCATGGAGTTCTGAGACATCCTGGATCAATTACTAATGTCTGAGTTTGATTTTAGCCATTTTTACATATGAATAGAGACTAATGTTTCTGTCTTCAGTACAGATGTTTTCCTTGGCTGCTAAAATAGATTGTTGCTTTTTTATTGCTGCTGTGTTTTATTAAATTGTTAC chr4 - 94230402 54532219 54532218 54532396 39698007 39698006 39698184 178 TGGCAGCTATGGGTCAAAGAATAGAGGGACACCCGGGATCAATTATTGATGCCTGAATTTGATTTTAATCATCTTTGTATGTGAGAGTGAACTAATTTCTTTGTCTTCTGTACAGATGTTTTCATTGGCTGCTAAACAACACTG-----TTTTGATTTATGAGAGGTCATAACAAATTGTTGC ..:....:..:.....x:..:.xxx.:....:..x..........:.:...:....:..........::...:...::..:...:x:x::......x.:.:.......x..............x............xx.x.:..-----....x...xx..xx:x..:x..x:........:. 144M5D34M 129/178 72.5% 178/94230402 0.0% 5/178 2.8% 52130016 NA +3356 chr4 + 190214555 106694703 106694702 106694767 65 CACCTTTTCCCCCCTCCCACCACCTCTCTCTCTCCCTCTGTCTCTCTCTCTCTCTCCCTCTCTCA chr4 - 94230402 23891385 23891384 23891449 70338954 70338953 70339018 65 CACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCCA ....::x:.x....:......x..:....:.....::::..:...:...:.:.:....::..:.. 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 82803318 NA +10272 chr4 + 190214555 106749486 106749485 106749751 266 CATTTTGTATCCTAATAACTGTGTTCGTGGCTTTGACATTTCCAGTGAAAAGAGGATTGGAGAAATATCAGGTACTATCATGGATGAAAGAAAAAATATTTCATTTCAGCATTGGAAGAACTAAGCATTTGTCCAACTTTAGATGTTATCCTTGGCTAGGGACCTATAATTGCTCTCACAGCCCAAACA-GAACCAGGTAT---GAGGGATGCATGTTAACTCTCTGTTAACC----------GGGAACTCTGTTAAAGGTGCTAATGTGAGAGATATTA chr4 - 94230402 54552084 54552083 54552358 39678045 39678044 39678319 275 CATTTCACATTGTAATAACC-TGCTCGTGCCCTTGACATTTTCAGTGAATAGAGAATTGGGACATTATCAGTGACTAGTGAGGATGAAAG--GAAATACTTTACCTCAGCTGTGGAAGCACC-AGCATCTGTTATATTTTAGCTGTTATCTTTGGCCCAGGACCTATAACTGATCTCACAGCTGAGACAGGAACCATATGCATAAAGAAACTCGTTTTAACCCTCTCCTCACCCGTCACTCATGGGCGCTCT-CTGTATGTGCTAATGTGAGAGCCATTA .....:::..:x.......:-..:.....x.:.........:.......x....:.....::x.x......xx....x::x.........--:.....:..:.::.....xx......x..:-.....:...:xx.:.....x.......:.....:x:..........:..x.........:x.:...-......x:.::---:..::.:x.:.x.....:....x:.x...----------...x:....-:.:x.x...............x:.... 20M1D69M2D30M1D66M1I11M3I29M10I9M1D27M 192/261 73.6% 275/94230402 0.0% 19/261 7.3% 52197402 NA +7860 chr4 + 190214555 106762712 106762711 106762978 267 AGAGTCCTTCACGTGGCATATCTGATTATTGTGGATGTCAGGTTTTATTTCCATTATTTTTGG---AAGCCAGCGTCCTGTGCTGCTTTGTAAATGATTCTTTTCAAGTATGACTTATATTGTTGGAGAAAAATATAAACAACAGTGAAATATGGGCCAAAGTGAATATTAATTTAAAAACTATAACCCTGGTTCTGAAATGAAGTAACTTTTTTGGCTAACATCTGCAGTTTT-GCTAAGCTGTCTGCACTTAGAGTAAATGAGAAAAAA chr4 - 94230402 54553115 54553114 54553376 39677027 39677026 39677288 262 AAAGCTCTTTACAAGGCAAAACTAATTACCTTTGATG--GGGTTTTCTTTTTTCTGTTCTAGTTTCAGACTAGCATTGCATGCTGTCTTG-AGGTGA--CTGTAGAACTCTGTCTTAAAT----GGAAAAAAATAAAAACAAAAGCCTAAAGCAAGCCAAAGTAAATATTAATTTTGAAACTATGAACTGATATCCACAATGAAGTAACTTCTTTGGCAAACACCTGCAGTTTTGGGTATATTGTTCATTCTTATATTGAATAAGGAAAGA .:..::...:..:x....x.x..:....::x.x....--:......x...::x:.:..:.x.x---.::.:...:.:x::.....::...-.::...--..x.xx..x.x..x....x..----...:.......x......x..:xx..x::::........:...........x:.......:.x.:x:xx..::x.............:......x....:..........-.x..x::...::::x....x.x.:...:..:...:. 37M2D24M3I24M1D6M2D21M4D110M1I36M 174/258 67.4% 262/94230402 0.0% 13/258 5.0% 52209597 NA +16633 chr4 + 190214555 106796982 106796981 106797300 319 GTGAGCTCTCCTACTA--GTTTACAACCTTACAAGGCTGTTTTTCTAACAGCAGAACATTGGCAATAAATGTCTATTAGTCAAAATCACTGCAGCAGTTTTATAAGGCCTATGAGTGCATATTTCCCAGTCTGCTTCTCTTTAAATTACCAAGAATGCAAAAATAACCAATAGTTTGACCTCTTAAATCACAAATTGGATAGGCTCACCATTAAAGTATATTGTAAATGTGTTTCCCATTATTTAGCTCATTTAGCATGTTCAACAGCAGGCATTCAAATGTGTTAAGGGGTTTTTTCATTTTTTTTTTTA----CTTCACAGAA chr4 - 94230402 54559058 54559057 54559374 39671029 39671028 39671345 317 GCGGGTTCTCCAGCCAAAGCGTGTAAACATGGAGGGGGGCTTTTCCACTAGTAAGCTTTTTACAATAGATGTCTATTATTCAAAATAAGGAAGGCAGTTTTATAAGGCCTGCGAGTACGCATTTCCCAGTCTGCTGCTTCTTATATTACCAGGAATGCAAAAATAACCAATAGTTTGACCTCTTAAATCACAAATTGGATAGGCTTACCATTAAAGGATGTTGTAAATGTGTTTCCCATTATTTAGTTCATTTGGTGTATTCAGCCGTGAGCTTTTGGATGTTTTG--------TTTTGTGTTGTTTTTTAAAATCTTTACAGAA .:.:.:.....x:.:.--.:x.::..x.x.:x.:..xx.:.....:.x:..:.::x:x..x:.....:..........x.......x.xx:x:.................::....:.::...............x..::...x.......:.....................................................:..........x..:..........................:......:.::.:....:.x.:::..x..:::....x..:--------...::.x..x.......----...:...... 16M2I268M8D17M4I10M 240/311 77.2% 317/94230402 0.0% 14/311 4.5% 52237924 NA +9497 chr4 + 190214555 106798671 106798670 106799084 414 AAGATTCAATTCTAAACTTAAAGTAAGGAAGC---------------------TTTTTCCCCTTACTTTTCATCT-TGGGAAATGTGAAGTGGTTTGCAATAAGCCAAAGGAAATGAAAGCGTTGATGAGAGAGATA----GGCATGTAGGTGATT-------------GATAACAGCCAAGGTTGCCTGCAGGTTATTGATGAGCCACACATAGTGCAGCAAACCTGTATTTTATTTCACAAACCATG-ACATAAAGGTGTAAATGTGTTCCATTAAAATCATATTCCAAATGTGTTTCATTAAAACAAGATTTTGCAAGCTATCTAGATGATGTGTAAGTACTTGTAGATAGAATATTGGTATATGTA-AACTTTCTCGATGAACAGGTAAAA-GTTGTCGGTATTTTCTTAAATTGGGTATTTGTCATTTGCACAGAGCTTCTCCTTTTAAAG chr4 - 94230402 54560751 54560750 54561195 39669208 39669207 39669652 445 AAAATTAAATCCTGATTTCAAAGGATGAGAGCAGTTAGGTGGGGTTTTTTTTGTTGTTTGTTTTTCTTTTAATTTGTAGGACATATAAAGTGACCTGCTGTCTGGCAGAGGAAATGAAAGCAG-GATGAGACAGACAACTGGAAGTGCAGGTGGTTTTACTGCTTTTGTGATGAAACTGTCTTCTGCCTTTGATTCCTTTAAGGGAAGTATGCAGTACAGCAAACCCCTACTTTATTTCA------GTGTATGCAAAGGTA-AAATGTGTTTCATTAAAATGAGATTCCAAATGTGTTTCATTAAAATAAGA-TTTGAAAAATGCTTAGATGATGACTAGATTCTCAAATATAGTTTAAAGAAATGTGCACAGCATTCT--GTGAACAGATAAAATGTCATCTGTAATTCTTTGGATATACTGCCTGTAATATACACTGTCATCTTCTGTTTAAAG ..:...x...:..:.x:.:....x.x.::...---------------------..x..:x::..x.....x..:.-.:...x..:.:.....:::...x:.xx.x..:.............:x-.......x...:.----.:x:..:.....:..-------------...:.x.x:xxxxx:.....x:::x.:x..x.x.:.xx::.:::...:.........:x..:.........------:..-.:::......:-.........:.........x.x.......................:....-....x..:x.:::.........xx..::.x..::x.x....xx..xx.:x..:..:.-.:.x....--:.......:.....-..::..x...x..::..::..xx:x.:::...x..x.:...x.xxx.::..:x....... 32M21I22M1I47M1D13M4I15M13I71M6D3M1I11M1D50M1D57M1I8M2D14M1I60M 269/403 66.7% 445/94230402 0.0% 53/403 13.2% 52237920 NA +19687 chr4 + 190214555 106801971 106801970 106802395 425 TACTGGTGTAATCAAATACATTTA-GGGAAACAAAAAAGCAATGCTTTTCCCT---AGGAATTTGGTA-------------------AAATATGGTGTAGTCACATTCCCTTTTCTAAAAGAAAAAAAATTAAGGAAATAATAACAGGTGCTAGGCTAGGTAAAAGTCTCTTGTGATTATAGAAATAAC---GAAGGGTTTAAGTGGGAAAACTCTTAAGTGCTGGAAGTGTTGGAAGAGCAGGCTGAAGATTAGAATTAGAATCCCCACGGGAAAGAAGGAGGTAAACTCTTTACCATAAATCATCTAGATGCTTAATTTGAAATCAAACATGAACCTGAACATGTGTCATATAATCTGGCTAAGTACACCTGGGTTTTATTAAGATGGTGTGAGCCAAAGACCACAGTGTTTTAGAAAAGCTTGAGCAGATCCTCTGCTAAAGAGAAAA chr4 - 94230402 54563125 54563124 54563568 39666835 39666834 39667278 444 TAATAGTGCAATCAAATCCTTCTACGAGGCAGAGGAAAGCAATGCTTCTTTCTTCTAGGAATTTAGCAGCATCCAGTAATCACAGTGATATATGCTAGGTTCATGCGTCCTCCT----AGGGAGAGAAGGCAAGGGAATAATAACAGATGCTAGGCTGGGTATTGGTCTCCTGTGATAATAAAAGCAACATTGAAGGTTTCAAGTGGGGAAG-GCCTAAATGCAGAAAGTGTTGGAAGATCTGGTTGAAGATTAGTATTAAACCTCATGTGGGGGAAAGGGAGGTGAACTCTT--CCATAAATCATCCAGATACTTAATTTGATATCAAACATGAACCTTAACATGTGTCATATAATCTGCTTTAATACACAGGGGTCTTATTAAAATGGTGTGAGCCAAGGACTGTGCTGATTTAGACAAGTTTGAGCAAGTCCTTTTCAAGGCAGAAAA ..x.:...:........x.x.:..-.:.:x.x.::............:.::..---........:.:.-------------------.x.....x.:x:x...:::x:...::.----.:.:.:.:..:x:....:...........:.........:....xx:.....:......x...:..::...---.....x..:.......:..:-x.:...:...x.:.............x.x..:..........x....:.x::.x:::...::.:.:......:.......--............:....:..........x...............x....................x:.x.:.....xx....:.......:..............:...::::x..x......x...:.......::....:.x.x.::x...... 24M1I28M3I12M19I27M4D71M3I20M1D80M2D156M 315/418 75.4% 444/94230402 0.0% 33/418 7.9% 52238846 NA +3905 chr4 + 190214555 106810185 106810184 106810407 223 CACATTTCCTCCCCTTCCTCCTCCTCCTCCTCCTCACTCTCTTCCTCCTCTTCTTCTCCTTCTTTCTTCTTTCTTCTCTC-----------------CTTCTCCTCCTCCTTCT-------------TCCCTTCTTCCTCCTCTTCCTTCCCTTCTTCCTCCTCCTCCTTCTTTTCTCTT-TCTTCTTCT-----TCTTCCTGCCCCTCCTCTTCCTCCTCCCCCTC-----TCCCTTTCCCTCCTCCTCTTCTTCCTCCTCCT chr4 - 94230402 66025678 66025677 66025941 28204462 28204461 28204725 264 CACTTTTCCTGCTCTTCTTCAGCCTGATCGTTCTGTCTCGCTTCTTTACTATTTTCTCCTTCCTTTTTCTTTCCTCTCTTGGCTCTGATGCCTTTGATCTCTCCTAATCCATCTCGCAGCTCTGCAGTCCAATTTTACCCCTCACTGTTCAAATCTTACTCCACCACTAACCTTTTTCTCATCTTGGTTTCACAGTCTTTTTGACTCTATCTACGCACTTAACTTTCAATATTTCCTTGTCCTCTCTCTGTCTACTCTCATCCT ...x......x.:....:..xx...xx..x.:..xx...x....:.:x::x.:.........:..:.......:.....:-----------------::......xx...x...-------------...xx.:..x.:....x::x...xxx....x....x..x.:xx.:...:...:-....xx.:.-----....::..x.:..x:::x:x.x.:.xx.::..-----.:....x:....:::..x.::x::...x.... 80M17I17M13I53M1I9M5I32M5I32M 140/223 62.8% 264/94230402 0.0% 41/223 18.4% 40784507 NA +3004 chr4 + 190214555 106810189 106810188 106810256 68 TTTCCTCCCCTTCCTCCTCCTCCTCCTCCTCACTCTCTTCCTCCTCTTCTTCTCCTTCTTTCTTCTTT chr4 - 94230402 20485619 20485618 20485686 73744717 73744716 73744784 68 TTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT .....x.....x..:.x:..:..:...::..x.::.:.::..:::.:::...:.:......:.:.... 68M 43/68 63.2% 68/94230402 0.0% 0/68 0.0% 86324570 NA +4515 chr4 + 190214555 106810280 106810279 106810417 138 CTTCCCTTCTTCCTCCTCTTCCTTCCCTTCT----TCCTCCTCCTCCTTCTTTTCTCTTTCTTCTTCTTCTTCCTGCCCCTCCTCTTCCTCCTCCCCCTCTC---------CCTTTCCCTCCTCCTCTTCTTCCTCCTCCT---CCTCCCCCTC chr4 - 94230402 93339633 93339632 93339786 890617 890616 890770 154 CTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCTGGACTTCCCATTC ..:...::x.:.x::...:...x..x.:...----..::...x.x.::.........:x..:x.......:.:..:...::..........:x.........---------..::xx..:.....:.xx.x...:::.x..---.:....x:.. 31M4I67M9I30M3I10M 93/138 67.4% 154/94230402 0.0% 16/138 11.6% 13470647 NA +3195 chr4 + 190214555 106810359 106810358 106810411 53 TCTTCCTCCTCCCCCTCTCCCTTTCCCTCCTCCTCTTCTTCCTCCTCCTCCTC chr4 - 94230402 53066147 53066146 53066199 41164204 41164203 41164256 53 TTTTCTTCTTCCCCCACTACCCTTCCCTCCTCCCCTTCACCCTTCCTCTCTTC .:...:..:......x..x..:...........:....x:...:.::...:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 53744212 NA +3414 chr4 + 190214555 106810378 106810377 106810452 75 CCTTTCCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCCCTCCTTCT----TCTTCCTTCTTCTTCCTTCTCTTTTTTAGA chr4 - 94230402 77208611 77208610 77208689 17021714 17021713 17021792 79 CCTTCCTCACTGCCTCTTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTTTGCATTTAGA ....:.:.x.:x........x.:...:..:............:x.----x........::.....:::.:x:x...... 45M4I30M 54/75 72.0% 79/94230402 0.0% 4/75 5.3% 29601767 NA +3746 chr4 + 190214555 106858856 106858855 106858991 136 AAAGAAGAAGAAGAAGAAGAAGAAGGGGA-AGGGGAAGGGGAAGG-----------GGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 44053989 44053988 44054137 50176266 50176265 50176414 149 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..::.x.:..:....::.:.......:..-.:.::..x...:...-----------.:...........x:..:.x...x.x:.....x.::.....x..-.x.....x:.:x.:.x..::::.::...:...:x.:x:...x::.:.. 29M1I15M11I44M1I48M 87/136 64.0% 149/94230402 0.0% 13/136 9.6% 62804867 NA +4603 chr4 + 190214555 106858865 106858864 106859132 268 GAAGAA--GAAGAAGAAGGGGAAGGGGAAGGGGAAGGGGAAGAAAGAAGAAGAAGA------AGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAA----GGAGGAAGAGGAGGAGGAAGGGG------------AAAGGTAAGGGGATGGGGGAGGGGAGGGGGAGGGTGAAGGGGGAGGAGGAG--GGGGGAAGAGTTGGAGGAGGAGCAGAAAGGGAAGAAAGAGAAGAAAGAAGA chr4 - 94230402 27548007 27548006 27548296 66682107 66682106 66682396 290 GAAGAACTGAGGCAACACGAGACTGAGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGA----GGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGA ......--..:.x.:x.x.:..xx.:...:x..x:xx:.:..:....:...::.:.------:..:...x..:.....xx..x:...x....x:.:......:..x.:::.x....:xx......:.....:xxxxx.....xx....x..----.:..x.....:.:....xx.:..------------...:.x...:x..----...:.::.x.x:.x:xx......:::::..::..--:.:......x:x:xxxx..x...x:xx:.:.......x.....x.:..... 6M2I48M6I89M4I23M12I13M4D34M2I51M 163/264 61.7% 290/94230402 0.0% 30/264 11.4% 79310858 NA +3154 chr4 + 190214555 106858871 106858870 106858924 54 GAAGAAGAAGGGGAAGGGGAAGGGGAAGGGGAAGAAAGAAGAAGAAGAAGAAGA chr4 - 94230402 19799669 19799668 19799722 74430681 74430680 74430734 54 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA ...::::..:.:..x:.........:...........:.:...:..:..:.:.. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 87059202 NA +3096 chr4 + 190214555 106858982 106858981 106859055 74 AGAAGAAGAAGAAGAAGAAGAAAGAAGGAGGAAGAGGAGGAGGAAGGGGAAAGGTAAGGGGATGGGGGAGGGGA chr4 - 94230402 25300505 25300504 25300578 68929825 68929824 68929898 74 AGAGGAAGAGGAAGAAGAAAAAAAAGGGGGGGGAGGGAGGGGGTAAATGGGAAATAACCCCGTGGAAGAAGGGA ...:.....:.........:...:.:..:..::::.....:..x.::x.::.::...xxxx:...::..:.... 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 81558477 NA +3387 chr4 + 190214555 106864871 106864870 106864935 65 AATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704273 19704272 19704337 74526066 74526065 74526130 65 AATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...x..x...:.......::.....:.x.....:...x::..............x:.x.xx.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 87160598 NA +3350 chr4 + 190214555 106864873 106864872 106864933 61 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704277 19704276 19704337 74526066 74526065 74526126 61 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x...:.......::.......x.....:...x::..............x:.x.xx.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 87160596 NA +3174 chr4 + 190214555 106864874 106864873 106864937 64 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x...:.......::...:.:.x.....:...x::..............x:.x.xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 87160600 NA +3282 chr4 + 190214555 106864874 106864873 106864931 58 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704280 19704279 19704337 74526066 74526065 74526123 58 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...:.......::.......x.....:...x::..............x:.x.xx.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 87160594 NA +3193 chr4 + 190214555 106864891 106864890 106864952 62 TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGTATAAAATA chr4 - 94230402 48089497 48089496 48089558 46140845 46140844 46140906 62 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATA .:..x..x...:.:.::::........:....x.x........:.:.:....::.:...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 58775394 NA +28392 chr4 + 190214555 106868092 106868091 106869218 1127 AAGCTATTGCTGGTTACCCGTATTCTATTTAGATTCAGCATGTGTTGTGATATTCCCAGAAATTAAGAGTTAGTGAGATCGGGGTTATTTTTCCCCAGAGAGAAAAAAAACCCGAGACTGGAGAAATTAAAGATAGAAAGCCTGCCT--------AGGGACTGGGCTTCCAAGAGGCACTGCATACCTGCAGATGAGTTTAACAGTAGGGCTCCTCAAGAACAAGGACCTTGTATTTATAGAGATGCAGCTGGAGCCACAAGTGCCTGGGGATTGAGCGGGTTTT-AGGAATAGAAGCTCACACTGACAATAAATTGGCTTGGAACT-GCACTTATCTTACAGTCAATCCAAACTGTCATGGACCTATCCTATTGGAATGAAAATG-GCAGAATCAGCTGATATGAGGGAGAACTTAGGGTGTACTTTAAGCTTCAAATACTCCATGGCCCAAGAATTCAATTCCACTAGTCTCTCCATATGTCCTAAAGCCACTCT-GTGGTAATTCAGCATGCCAGAAGTCTCCAGATCCACTTGAGCTTTTCTAAACTTAATAGCCAGAAATGAGCTATTAACTTAGGACCGTAACTAAAATTAATATGGGGTATGGATAAGCAAGACTCTGGGGGAGTCATTATCTGTCTTCCAGATGCAGGGG-TGGGGGAAGTATGGGAGTAACTGTGCATCTTAAAATATTCATATTCTTTTGGCCCCAGTCCAGATCCTGACTAATAATTTTGAAATGCTGAGGACAGAAGTTAAACAGGCATCTAGATCCATG--TTCACTAGGGAGCTCTTGATCAGCTAGCAGCAGGCCAGTAGTGAGAAAAGTGTATGAATCTTGAAGCCATGCCAAGAAAATAAAACCCAGTGGTTCAGGGCCTATTGTAGGTACGAATGGAGAGAGAGAGTTCAGATGAGGGTGAAGATCAAAGTCTGAGAAGGAAGGATTGATTGAG----CAGGAGACAACTGTGTAAGTGCAAATT-GCATAAACTTAAGGAAGCTCCT--------TCTTGTTAATGGCTCAGGAACAATAAAG--ACCAAAGAACACA-----ACCAGAGCCTTACGTGTGTTTCCGATTCTCCTGCCTAAATACTGATGAGAGAATGATGGTGAAATGAAAGAGGATAT----AAAAGCAATGGGT chr4 - 94230402 54576714 54576713 54577797 39652606 39652605 39653689 1084 AAGTTTTCTTTGACTATTGCTGTCTTCTGCAAGCTCATGCTGTCTTCTATCCTTCCCACAAACTGGGAGTTTGTAAACTAAGAATT--TTCTCACCCAAGAGAGAAGAAACTTGAAATTATTTAAAATGAAGA---AGAGCCTGAATGAATTAGCAGTGA-TGAGCTT----AAGGCACAG--TACTTGCAGATGAGTTTAACAGTTGGACTACTTAACAGCAGTGACAT-GTATTTATAGCAATGCAGCTAAAGGCACGATCACCTGGGGATTTAATGGGTTTTTACTCATAGAATTTCGCACTGACAATAATTTGGCCTGGATCAAGTATTTGTTTTACAGTTAATACAA-------TGGG--TAACTCATTAGAGTGACAATGAGCAGGCTTC-TTAATGGGAGAGAAAGTTCAGAATGTGGCAACGTGTGCAAA--------GGCACAACTCTGCCATCC---TTGTCTCAGGGTATATCCTTC--CTGCTCTTGTGGTACTTTACCATGC-------------ATC-------GCTGTGCT----------GCCAGAAAGCAATTATTAGCTTATCATTATAACTAAAATTAATATGGGATGAGAATAAACAATACACCAGGGGACTCATTATTTGTCTTCCAGATGCAGGGGGTGAAGAATATATGGGAGTAACTGTTTGCCTTACAATAGTAGTATTCTGATGGCCACAATCCAGGCCCTGACTAATATCTTTGAAATGCTGAGGACAGAAGTTAAACAGGCATCTAGATCCCGGACCTCGCTAGGGAACCCCTAATTAGCACATGGAGGGCGAAAAGCGAGGGAAGCAC-TGAAACTTGAAACCAGGCCAAGAGAATAAAACCCACAGGGTTTGTGGCTATTGCAGGTAATAACAAAGGGATCGTGTCTATAGAAGGGTGAAGGAGAGAGTCC---AGGGAAGGGTAAATCAAGAAACCAGAAGA----TCTGAGGAGGCAGATTGGGATCTGGCAGGAGAGGGTTCTGCTGCATGTTTTGGTCATGACTTAGGGAAGGCACAGTCACCGAGTGATGGATCTGCACCAAGACT-------TGCCTCGGTCTTTTCTGCATAAGAACGTGCGGAAGAATGATGGTT-GGTGCAAGGGGAAGCCATGGAAAGCCATGAGT ...:.x.:x:..::..::xx.:.::.x.x:.:::...xxx...x..x.:x:x......x...:.::.....x..:.:x.x:.::..--..:..x..x:.....:..:....::..:.:.:xxx...x.:....---.:......xx.--------..x..-..:....----:......x.--...:...................x..:..x..:..x.:..:x...x.-..........x:........::..x...:.x::..........x.::.......-.xxx......x:..:............x.....:....x.x-.:.:..:.:.......:...x...-------...:--..x.::...:..:...x....-....:x.:x-:.:..:x...:..:.::.:..::...:x:xxx:xx.x....--------...x...xxx.x.x..:.---.x.....xxx:...:....xx--.::....-......x..:.x.....-------------...-------...x.x..----------........xx.::.....:....xx.:::...................:.:x.:....:...x..x.::.....x.......:...................-..::.:.x:...............x:::....x....x.x:......xx.....x..:.....::...........x:..........................................xx.--:..:.......:.:.:.:..:...xx:::.x:...x.:x..:...::...:::-....x......:...x.......:...........xx..x.:x.x.x......:.....xx..:::..:..xx.x..::.x.x:.........:xx.:....:---.:......:.x:..::..----...:...----.x..x:::x...:...-.x..xx:x:x:::..:.x.:..--------.:...x.x...:..:...:.x:::.x..--...:.:x:.::x.-----....:::.:-------..::..x.x:.:.:....x...:x..xx::.::...........x-::..x...:...x::----:.....x...:.. 86M2D45M3D11M8I5M1D7M4D9M2D47M1D54M1I41M1I24M7D4M2D21M1I9M1D41M8D18M3D21M2D7M1I17M13D3M7D8M10D102M1I123M2I53M1D103M3D18M4I7M4D16M1I22M8I28M2I13M5I9M7D45M1D15M4I13M 715/1045 68.4% 1084/94230402 0.0% 121/1045 11.6% 52291378 NA +10664 chr4 + 190214555 106907241 106907240 106907565 325 TTCAGAGATGAAGCCTGTCAGTAGGAAGAAAAAAATGTGTCCCTATAGCCCATTTCCACCCTGAGTCTTTTT-TGACAGAACGAAGACTGCAATTTGGACCAAAGTGGAGGTCCTTTAGTTATGTGCTGGGAACTCAAATTCTCTGGGAATAATGCCAAGACCACCAGACATATTGAACTCACAACTTTTTACCATCACATCATCAGAATGAGTTTCAGTCCCTCTGGTCAATATTGGATTCTGACCAATGTGAGTCAGGTGAAAGGTTACTAACTTAAAAATTACTTTG-------ATTTTTTTTCTCTCCA-------------------TCTGAACTCTTCCCATTGTC chr4 - 94230402 54580708 54580707 54581047 39649356 39649355 39649695 340 TTTGGAGAGGCA-CCTGTCAGGAGGAAAGACAGAATGCATCTCTCTAGCACACTTCTGCCTTGGGCCTCGTTATAGAAAAACAAAGGCTGCCAGTTGGACCAAAGT---------TTAGCAAAG--CTGGGAACTCTGCTTCTCTGGGAAGAAGTCCAAGACCACCACCCACCTCGAGGACAGAGTATTTTGCCGTCACATCATCAGGACAAGCTGGAGTCCCCTTGGTCATGGCTGGACTTAGACCAGGGTTCTTCAGGTGAAAGGTCAGAGGGTTTAAAATTGTCTTGTCACAGTGTCCTATTCTTCCCCAGTCCTAATTAATGGTCTTGTCTCAACCCTTCTCACAGTC ..::....x.x.-........x.....::.x.:....::..:..x....x..:...::..:..:.:..:x..-.::x.:...:...:....x.x............---------....:x.x.--..........x:x...........x..xx............xx..:x.:..:xx..x.::x....:..:............:.::..:.xx......::......xx::....:.:x.....:x..xxx.............:.xx::x..x......:::...-------:.::.x..::..:...-------------------...x...:....:..:x... 12M1D59M1I33M9D9M2D164M7I16M19I20M 218/313 69.6% 340/94230402 0.0% 39/313 12.5% 52326533 NA +10626 chr4 + 190214555 106921813 106921812 106921991 179 GAGGAGAAAAATTTAATAGATTTTATCTTATTATACATTTTTCCTAAATTACAAAGTCAATAG-CTGCAAATATATTCTGCTACAAAGCTTTCTGTAAGAAATATCTCTATAAGAAAATACATCTCATT-AACATTTCCTGTAAATAAATTACTTCAAATAATAAT-TTTTAAAAGGGTGGA chr4 - 94230402 54588256 54588255 54588435 39641968 39641967 39642147 180 GGGAAAGGACATTTAATATATTTAATCTTATTATACATTTTTC-TACATTA-AAAGTCAACAGGCTGCAAATATATTTTGCTACAAAGCTTTTTGTAGGAAATATCTCTATAAGAAAATACATCTCATTAAACATTTCCTGTAAATAAATTATCCCACATAACTATGTTTTGTAAGAGGAGA .:.:.:::.x........x....x...................-..x....-........:..-.............:..............:....:...............................-......................:::..x....:x..-....:x...:.x:.. 43M1D7M1D11M1I65M1I36M1I15M 153/177 86.4% 180/94230402 0.0% 5/177 2.8% 52333557 NA +21325 chr4 + 190214555 106923665 106923664 106924725 1061 CAGTAATTTCCACTGTGTGCTTGTTCTCTTAATAATAGCATTTTCCACAAA-TGTGTACATTATTTACATAGACAAGTTGCATAATGGAAACACTGGCTGCACTG-CATTTGTCACCCATTCTAATCTA--TTCAGTTCATGTTTTCTTTCTCCCTTTTTGTGATCATCTATATTCTTATCACGTTTCTTATTTTAGCCATTCTTCT---GCATCTGAACCTTATTTTCCACCATGCTATAATGCATTAAATACACAACTTCA--CAGTCTGCAATTGATGATGTT---CCTCAATGGTGATCAAATTTTCTGACACACATGGAGTCTGGCTTTGGAGGAGTAGGTGGCATCTTTCCATACTTTGCAAGACAGGCCCTTCGCACAGTCGCAACGCTGGAAAATTTCCAGCCCATGAGAACCCTTCTTGCGTTGTTTGGTACAGACTTCCCCCTGATGGAGCACTGGTTTGCAGATTTTGGTCCAGAAATGACGAGCACAGCAAAACCCTTCAATGCAGTCTGATGATCGTAGGCAGGGGTCTCCTTCATGCCCTGCAGAGATGATGACCAATAGATGTTACCCT---GACACTTCAGAAAAAAAAAATTCTA-------TTTTGCAA-------TCAGAAGCACATAAAATATTTTTACTTATACTATCTTCTATG--TTGTTACCATTTATAATGAAA----------------------AGTCTTGG--------TTGATACCAATTGGCTCTGCCTCTTATCACATAAATCTATTATGGTCTGTTTCCATTA----TTTGCCACCTAAATAACAAGTTTA-------------------------------------------ATGACT---AGCTAGGATT--------------------AAAGAA---------------------------------------ACTTCCTTG-----------------TAATTTTTTCTAA-----------AACCAATGGAATTAATTATCTATATTTTTCT----TCTATTTCTTTATTTTAAAA-------------------AAACCCCAGAACTACAGATAT--CCCTACCTTTTATATGTGACATCTTAGTGTGTGGTCTTCCTAGATTCTGCCATCCCAAGTCATGGTTTGAGTAATGACCGTGGTTTCGATCTCTGTGCCGAGTACCATCCAGAGCCGGGATGTGAGGGGTTAAGATGCTTTCAGTAACTGGGATACAGATGCCTGGAGATGATCATATAATCAGTTA chr4 - 94230402 54590314 54590313 54591509 39638894 39638893 39640089 1196 CATTAATTTCCACTGTA--CTTATTTGC---ATACTAGCATTTCCCACAGACTGTAGGAGTTATT----------AGTGG------GAAATCTCTGGCTGCTCTGGTGTTTTCCACCAGCTCAAAAAGAAATGCATTTGATGTGACTTTTCTC------------------TACTCCTACC----TTGTTACTTTAGCCATTCCTCTTTCACATGCAGTCCTCATTTCCCAGCATGTTGTAACACATTAAATACAGAAAACCAGTCACTTAATACTTAGTACTATCTACCCT---------TCAGATTTTCTGACACACGTGAAGTCTTGATTTAGAAGAAGAGGTTGCATCTTTCCATACTTTACAAGACAGCCCTTTGGCACAGTCACATCGTTGGAAAATCTCCAGTCCATGGGAGCCTTTCTTGCGCTGCTTGGTGCACACCTCCCCCTGATGCAATACAGGCTTGCAAATTTTGGTCCAGAAATGGCGAGCACAGCAGTGTCCCTCAATACAGTCTGATGACCGCAGGCAGGGATCACCTTCATGTCCTAAAAAGA-GCAATCAAACTGTTTTTACCTCAGGGGAAAATAGAAAAAGACAAATTCAGAGTAGACTGATGCAAATGAAGCTCAGAAAAAGGAGAGATG---------ATATTTCCATCTGTGGCTTTTTGAGGTACATAAAGAGACAAGAAAAGAGATGAATTAGGGAGGTTCAGAAAAGTAACTGATAAGAACTG-------------TCACA-AGACTTAGTAAGGAGAAATTCAGCTACAGGTTTGTAGACAAAATGATAAATGCATAAAGACATTACTCTTACAAGAGGAGGATGTGGACAATCTTGTATAACTGAAAACTGAAATTTCAATCCCCTCTGATGTGGGGAAGAAAGCAGATGCTATTCCAATCGGGGGAAACTGGTGGTCAATATTACCTTGCTTTCTGAACTGTGCTCTGAATTCTCTTAATAGAGATTCACAACCTATGAACTTA-----CTGTGTATTCCTGGTGTGTGCTGCTGTATTTTAACAGCATAATGTTATTCATAGCAGAACGATGAAGTGCAAATGTGATCTTACCTTTAATGTGCGACAGCTTGGACTGTGCCCTCCCTAAGTTTTGCCATCCCAGATCCTTGCTAGTATAATGACTGTTCTT------CTTGTTGCGTGGCCCGTCTAGTGCAGGGATGTGAGGCGTGAGGATGTTTTCAGTTACTGGTACACAAATACCTGT-GAGGAAAAGTCAGTCAGTTA ..x.............:--...:..:x.---...x........:.....:.-...:x:x:.....----------...x.------.:..x.x........x...-::...x:....x::..x..xxx.--.x..x..x....xx::......------------------..:..:..:.----..x...:...........:...---:...x:::x...:....:...x....:.:...::...........x..xx:..--..x.:x::.x..::.:x.:.:---...---------...:..............:..:.....x.x...:..:..:x....x.................:........x..:..x........:..x..:........:.....:.....:..:..:........:..:.....:..x..:...........x.::..x..:.....:.................:...........:x::..:.....:...........:..:........:..x........:...:x.:...-.xx:x.x..:x.x.x.....::---.:x.xx.x::....:.x......x:-------.xx.....-------......:x.x:x:.:..:---------...:.x:.x...:..--..x..:xx:.x:....x..:.----------------------..x:.::.--------:.....xx..:..-------------.....-.:.::..x..x..xxx:x...x::..----....:x:x.x....:.:..:.x:.-------------------------------------------..:...---.:..:::...--------------------:.....---------------------------------------.:.x.....-----------------.:.x..:.::...-----------....x...:.x...-----..:.:.x..:..----.x.::.x..x........x.-------------------.:.x.xxx...x.:..:..:.--:.:.......x..:..:....x...:.xx....x:..:....::..:..........::..x.x.:.x.x:.......:..xx..------::...xx..x.xx..:..:..x..x...........x..x.:....:.......x.....x.:...:..:....x-..x..xx.xx:.:....... 17M2D9M3D20M1I13M10D5M6D19M1I23M2I22M18D10M4D22M3I53M2I21M3I3M9D260M1D22M3I25M7I8M7I18M9D15M2I21M22I8M8I13M13D5M1D26M4I24M43I6M3I10M20I6M39I9M17I13M11I14M5D12M4I20M19I21M2I85M6D75M1D20M 688/973 70.7% 1196/94230402 0.0% 311/973 32.0% 52333351 NA +10059 chr4 + 190214555 106925796 106925795 106925952 157 TACCATTATTGCAGCGGGTACTGGGGCAGCACATGCCATCTCGGTGGCAGCGCTTCTTTTTTCTCCGACACACCATGCAGGCCGATGATCCTTGGTGGGGACTGTGGCAATACCTCCCAACTTCACACTCCTTATCACTGCTACAAGGGTAGGCCTG chr4 - 94230402 54592696 54592695 54592852 39637551 39637550 39637707 157 TACCGTTGTTGCAGCGATTCCCAGGGCAGCACATGCCATCTCTGTGGCACCTTTTCTTCTTCCTCCGGCACAACATGCACGCAGAAGATGCTTGATGAGGACTGTGACAGTACCGCCCAACTTCACATTCCTTGTCATTGGTGCAAGGATAGACCTG ....:..:........:x.x.::...................x......x.x:.....:..:.....:....x......x..x..x...x....:..:........:..:....x............:.....:...:..x.:.....:...:.... 157M 126/157 80.3% 157/94230402 0.0% 0/157 0.0% 52333100 NA +3090 chr4 + 190214555 106933941 106933940 106934026 86 GGACGTAAG---TTTCCTGTAAATGTGTGTGTGTGTG-----------TGTGTGTGTGTGTATGTGTATATATGTATGTATATATACATATATACACACA chr4 - 94230402 70982581 70982580 70982680 23247723 23247722 23247822 100 GGAGGTAGGCTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...x...:.---....x.:..x..:.x.:.x::...:-----------...........:.:......:......x::..x..:.:::.::......... 9M3I25M11I52M 61/86 70.9% 100/94230402 0.0% 14/86 16.3% 35951360 NA +3073 chr4 + 190214555 106933981 106933980 106934027 47 TGTGTGTATGTGTATATATGTATGTATATATACATATATACACACAC chr4 - 94230402 25393260 25393259 25393306 68837097 68837096 68837143 47 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCAC ......:........:.......x.:.:.:....:.:.:....:... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 81540721 NA +16166 chr4 + 190214555 106971568 106971567 106972054 487 ATGCCTTAACTAAACAAAGTCC---------CCCTACATCCAGAGTATGAATGATGCTGCTATTA-----CTTATTTCTACTGTCTTCCATCTA--TTTTATAGTGTTCTTTGA---TCCATTCTTTG-----CATTCTTCTTGTTTGAAAGTAATATTCTTGATAGTTTAATAATGAGACCCCTCCTTTGTTCCTAGATGCCTTGGCGGCTAATCAACA-AAAGCCATTGAAAGACTTAATCCTCTAAGCTTGGCACCACATCAGTCTGGAAGTAGTTTACATGCAGAGTCCTTTGGAGTAAATACTCATTAGAGGTTCTGTTGGCTCATT----TGGTCACCCACATTTTGCAGTGGGTGGCCTAGTTG-GCATCCTCATTATTTTCTTTTTCCACTCCTGAAAATAATCCAGATGTAGCAACCTGACACTACTTTCTTTGGTACTCCAAATCCATTGTTATGAAGGG-TCCATTAATTTGTGATGCTAGCTAATATGTCCAAATAAATAAAGGCC chr4 - 94230402 54602948 54602947 54603458 39626945 39626944 39627455 511 ATGAATTAACTATATATAGATCAGATCTGGTCCCCATCCTCAGAATAAGC-TGATTCTGCAGCTAAGAATTCTATTTATCCT-TCTCCCTGCTACATTTTACTGTATCTTCTGAAAATACATCTTTTAAAGCACACTCTTCTGGTCTGAAAATAATATTCTTTAT-GTGGAGCTATGGAATCTCTTCCTTGTTCCTAGATGTCTTGGAAGTTAATCAACATAAAGCCATTAAAAAGCTTAATCCCCTATGCTTGGCACAACATCAGTCTGAGAATGGTTTCTTTGTAACAGCCTTTGGAATAAATATCCATTCAAGATT-TGTTTTTTCCTTATACTGGTCACCCGCACTTTACAGTGGGTGGCCCTTTCATTTATCCCCATTACTGTA--CTTCCACTTCTGAAGCTAAGCCAGACACAGCAACCTGATACTACTTT-TTTGTTCATGCAACTCCATTGTAATGAAAAGTTCCACATATAACTGATATTTGTTGGGAAAGCCAAAGAAACAGGAACC ...xx.......x.:.x..x:.---------...:.:x::....:..x.x-....x....x::..-----::.....x.x..-...:..xx...--.....:x..:.::.:...---.x...::...:-----..:......x..:.....:..........x..-..xx.::x...::.:.:..:.:.............:.....x:.:.........-.........:...::........:...x.........x...........::.:.:....x:x..:.:x:x........:......::....x:..:..-....xx:..x..----.........:..:...:............:xx.::-x:....:.....:.x.x--:.......:.....:x...x.....:::..........:........-....x.xx.x...x........x.....::.-....:xx..xxx....::.x.:.::x.x:x.....x...:.::::.. 22M9I19M1D14M5I12M1D11M2I18M3I11M5I32M1D54M1I98M1D12M4I35M1I17M2D47M1D31M1I47M 343/480 71.5% 511/94230402 0.0% 38/480 7.9% 52368620 NA +3264 chr4 + 190214555 106982927 106982926 106983025 99 GAAAGAAAGAAGGAAAGAAAGAGAAGAAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAG--AGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGG chr4 - 94230402 10903376 10903375 10903475 83326928 83326927 83327027 100 GAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGA-ATAAAGGAATGTGGG .....:.::...:.....x...:..:x:x.....x.:::xx...x...............:::.--.....::x.....x::x..-.x.......x.x:.. 64M2I19M1D15M 67/98 68.4% 100/94230402 0.0% 3/98 3.1% 96079551 94135004 +3866 chr4 + 190214555 106982949 106982948 106983097 149 GAAGAAAAAGAAGAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAGAGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAAAAGAAAGAAACAAAGAAAATTTCT chr4 - 94230402 72821452 72821451 72821600 21408803 21408802 21408951 149 GGGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAGTTCT .::....::x.........::x...xxx:x.:x...:xx...:.::..::........::.:::.x..xxx.x.:...:..:.:::.:x:xx..xxx........:...x..:.x........xx.:x...:.::x...x....x.... 149M 88/149 59.1% 149/94230402 0.0% 0/149 0.0% 34161497 NA +3280 chr4 + 190214555 106982962 106982961 106983079 118 AAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAG--------AGAAAGGAAGGAAGGAAGAAGAAAGATGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAAAAGAAA chr4 - 94230402 56332132 56332131 56332256 37898147 37898146 37898271 125 AAATAAAATAAAAAGAGACAGTGACAAGAAAGCATCAAAGAAATAACAGTCCCTACAAGAACAGAATCAAAATAGGAGATAAATGAAAGATAGAAACAAAGA-AAAAGAAAAGCAGACAGAAGTAA ..:x..:.x.:.......x..x:.x..::.::x.xx...::..x..x..--------....x:...xx..::x..:...x.:........x.....x.....-........::x...x.:...x.. 49M8I45M1D23M 79/117 67.5% 125/94230402 0.0% 9/117 7.7% 50650830 NA +3086 chr4 + 190214555 106983314 106983313 106983399 86 AAAGAAGAAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAAG---AAAGAAAAGAAAAAGAAAA chr4 - 94230402 44400475 44400474 44400563 49829840 49829839 49829928 89 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAA ...:..x....x:x.x:x.x:...:..:::.:::..:....:.......::...:..........x.---...:.x...xx.x...... 67M3I19M 58/86 67.4% 89/94230402 0.0% 3/86 3.5% 62582839 NA +3346 chr4 + 190214555 106985811 106985810 106985902 92 GTCTCAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAGAAAAAAAATAAGACAGGAAGGAGGGAGAGAAGAAAGGAGGGAGGAAAGA chr4 - 94230402 40465771 40465770 40465862 53764541 53764540 53764632 92 GTCTGGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAA ....x:.:..:::.x:.x.::..x:.......:x.:::..:x:.::::....::.xxx...:.......:...:........:.:.....:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 66520040 NA +4198 chr4 + 190214555 106993740 106993739 106993998 259 CTTCCCAAATTCATTGCTTTGATTATGAATGTTG--TGAATAATACTGAAG----TTGTTCACCATCCAGTGGTCGGAAGC-------TGCGGGGAAAATAATTTTAATTTTAAATGTTTCATGCAACATTGCTAATGTTATCTATCCTGTCTGGGCAGGGAGAAAATTGGCAGGAGTCATGAGATGGAGAATTTATATGAGTTAATGGAAATGTTGTGGCTGACCAACAAAGAAACTTCCCCAGCCAAAATCAAAACAAAGATATTAACTT chr4 - 94230402 54607799 54607798 54608054 39622349 39622348 39622604 256 CTCTCTCAGATCACTGTTTTCATTA-GCACGCTACATGAATAACAGCAAAGCTATTTGTACAGCACTGGCTGCTCTGGTGCAGGCTCCTGCTCTGAAAGGATTGTC--TTTTAGATGTGCAATCCAG---TGCTGCTGTTATCT----TCTCTGGGAAAAAAAAAAAAGAAAAAAAACAACACTGCAGAAAACTGCAG------AATGGCAGCTTTGTGGCTGGCCAACAAAGGGTCTTTCCTAGCCAAAATAAAAAGAAAGGTTCTAATTT ..::.:x.:x...:..:...x....-.x.:.:.:--.......:.x::...----....x..x..::x:x..x..x.:x..-------...xxx....:x.x.x.:--.....:....x:x..x..:---....:x........----.x......x.:::.:....xx::x.::.::x.::xx:::..:..:.xxx:------.....x.::x.........:.........::x...:..:.........x....x....:.x:...:.. 25M1D8M2I15M4I26M7I18M2D19M3D14M4D50M6D68M 154/243 63.4% 256/94230402 0.0% 29/243 11.9% 52385941 NA +14904 chr4 + 190214555 106997784 106997783 106998168 385 TACTCAGAAAGTTCTTTAATAGGTTTACATTTGACCTTCTCATTTTAAA-----TAGCTTCTTCTTTTTCCCTTTTATTGCCCACCAAATTACAACTGACTAAATGTACCTATTTTGTGAAAATGGATTCCATTAGAGTGTAGTGTTACCTAACTATTGTTCTCTTCTAGAGG-ACATAATGGAGAACATGTGCAGATGCTTAACATCAAGCTCTTGTTTCTAGAATTACAG-----------------------TCTTAAAGCTGTCAGAACTGTTGAAGAACAAGGATGACCTGGAGCTCATTGGGTATATGAAACACCCTTTTTGTGAACATGTAAGTAGGTGAGGTAGGAGAATGCTAAACAACTAGCATGGAGGGCTTGAAATATCCAAGCAAAGGGAC---TTTTTCTTCT chr4 - 94230402 54609889 54609888 54610303 39620100 39620099 39620514 415 TAGTTAGGAAATTCTTCATTTCAATTTTATTTGTATCTCTCTTTTGAAAGGAGCTTACTATTTTCTTTTTTCTTTTATGGGCCACCACATTACATGTGACCAAATGTACCTATTTAGTGAAAATGGGTTCCATTAGTATGTAATCTTATCCTTGCATTGTTTTCTTCTGAAGGAAAATAATGGGGAACAGGTGGTGATGCTTAGCATCAGGCTCCTGTTTCTAGAATTACAATCTACTGGGAGCCACCAGCAATCTCTGAAAGCTGTCATAAGTGCTCAGGAACTAGTAAGATCCAGAGCACACTCAATACATTAAAGAGTCTTTT--TGAAAATTTAAGTAGGTGTGACAGGAGAAAACTGGCTGAATGGCACAAGGATCCTAACGTGTCCCTGCAAAGGGTCATGATTTCCTTCT ..x.:..:..:.....:.x.xx:x..x:.....xx::....x...x...-----.x:..x:..::....::.......x.x......x......xx....:..............x..........:.........x:....:.x...:.:xxx:......:......::...-.x.......:.....x...xx........:.....:....:................:-----------------------...x..........x..x..:.x.:....x..x.x..:.::....x..:.x::..:..x...x.x:.....--....x..x..........x.::.......x:..::x::.x.:...::::.:x.:.:.x:.:...xx........x.---x...:..... 49M5I119M1I58M23I71M2D76M3I10M 275/383 71.8% 415/94230402 0.0% 34/383 8.9% 52387895 NA +12778 chr4 + 190214555 107002027 107002026 107002582 556 TTAAGCAGGAAGTCAAATGTTCCATTTT-ATGAAAGTCTTACTCAAACTTAATTTTTTGCA--CTTTGGTATATAATGACTTTTCCATCTTCCTTCAAAGAAAAGAAATCTTCAATTTCAAAACCATCTGTTAGGGAAAAAATAATCTGTCCTAAATTACATCGTTCTGAACTAACTGCAAGACTGTTTCTTTAC---AATGTCTA-ATTTCAT---------AGTGCATGAT------AGGCAAACAA---ATTATTAAAATCATT-------TAAGTCTACATTTTTGTATTATTGAACTCTAAGTATTGATGATGTGTGGCTATATAGTTAGCAGACCTATTGGTTGTTTCTGCGTTTTACTTG---------CTTTTTCCATAAGCAGAAGCTGGATCTAATTTCCAAATGAAAGACTTCTTCACCGAAAAAATTTATTTTTACAAAGATATGGCTTTA-CAGTGTTTGTCATTTGGGTTCT------------------TTTATTTAGCTTTTTTGTTTTCTTCAAAACGTGAATGGAAAATGTTTATCTGCTAGA-GGGCTTCACATGCTTCTGCTTTGCTGTCTCAATGACTTTTACTGCCAAAAAGACA chr4 - 94230402 54612166 54612165 54612762 39617641 39617640 39618237 597 TTGTGCAGGGACT-AAATGCTTGATTTTCATGA--GTCTCATTTTGTGCTCAGCTTTTGTTATCTTCAATAGATAATGTCTTTACCATCTTTCTTCAAAGAACAAAAATCTTCATTTTCAAAACCATACGTT---GCCAAATGCATCTCTCATAAACTGTATCATTCTGAACTAGCTGGGGAAGAGTACATACACAGGAATATACATATTACATGAGGGATAGAGTTCATGGTACTGTGATGTCAACAGTCTGCTGATAAACTCATTACTTTTGCCAGATTGCATTTCTCCATAAGCAGAACATGAGTAC------TTCATGGCAACACACTTTGTAGACAAACTGCATTGCCCTACATTTGACACAGTCGTTCACCCCTCTCAGTTTGTAAAATCTGGATTCAATTTTCAAATGAAAGATCACTTTGCCG--AACATTTATTTTTACTGTGAAATTACTTTACCAATGTTTGGTGAATAGGCCCTTTTCAACCTTGGAGGTTATTTATTTAGATTTTT--TTCTCTTCAAAACGTTGGTGGAAAATGTT----CGCTGGAGGGGCACCACATGCTTCTGATCTGATGGCTGACTGACTTCTGCTGCCTAAAAAGCA ..:x.....:.x.-.....:.:x.....-....--....:.:.:x:xx:.x.x:.....:x--...:::..x......x....x.......:..........x.:.........x............x:...---.xx...xxx....x..x....:.::...:..........:...x:::.xx..x:x.x:..---...:.x:.-...x...---------...x....:.------.x.:x....:---::.:x....x.....-------:x..x:.:.....:.x:..x.x:::.x:x.:....:------.x::....x.:.:.x..x.:....xx.:..xx.xx::..:.:...x..x::---------.::.:..x:.xx.:.:..x......::.....:...........::x...::...--..x............x:x..x..x:.....-..:......x::xx.:..::..------------------.........x.....--..:............x::...........----:...:..-....x:............x.:..x..x..x.x......:.:.....x....::.. 13M1D14M1I4M2D26M2I69M3D60M3I8M1I7M9I10M6I10M3I15M7I36M6D51M9I55M2D30M1I22M18I15M2D29M4D7M1I55M 370/536 69.0% 597/94230402 0.0% 81/536 15.1% 52389861 NA +12661 chr4 + 190214555 107035327 107035326 107035596 270 CCTGCCTCTTCTGTCTGAAGAATGTGTTTGGG-GGTTTTCCTACCTGCCCCAGGTTTTTGCCCTTCTTACTGCCGCCGAATGCCAGTCCTTGGTACATGCCCGCAGATCGATTGGCGGCCTGACCAGGCGTCTCCCCGCCCAGAGAGGACTTGATGGAGTTGAGTTTGGCCCGCGAACTGCCGATCTGTGAGCTCTCCACCATCAGCACCGCGGCCAGTAGGAGCAGGCAGCAGGACGAATCCTTGCTCCGCATCAACGCGGCCATCTCCC chr4 - 94230402 54630472 54630471 54630739 39599664 39599663 39599931 268 CCTACCTCTCCTTGCCGGTGATAGTGCTTGGGAGGTTTTCTCATCTGCTCTAGCATTTTCCCCTTCTTACTGCTAGCAAGCTTCAGTCCCTGGTGGATGCCTGCGGATCTGTTGGTTGCCTGAGTTGGAGCCTCCCCCATCAGGGTGGACTTGATGGAGTTCACCTTGGAGCTGGAGCTGTCTAGCTGGGAGCTCTCCACGATCAGGACCGCGGCTAGTAAGAGGAGACAGCAGGAGCA---CTTATTCCACATCAGCACGATCATCTCCC ...:.....:..xx.:.:x..xx...:.....-.......::.:....:.:..xx....x.............::x.:.::x:......:....:x.....:..:....x:....:x......x:x..x.:......xx:...:.x...............x.x:....xx.xx..:...:.x.x...x...........x.....x........:....:...x..:........xx.---...::...:.....:.:..::........ 32M1I206M3D29M 195/267 73.0% 268/94230402 0.0% 4/267 1.5% 52404855 NA +3023 chr4 + 190214555 107063004 107063003 107063079 76 TTCAAATATATATATATACACATACACACACACACACACACATACACACAGACATAATAGATTGAAGCTGTAGTTT chr4 - 94230402 8395815 8395814 8395890 85834513 85834512 85834588 76 TTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCT ..:.x....:...::x....:xx.:.................x.....x.x:x....x.:.::x..:..::.x.:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 98667189 91547366 +23745 chr4 + 190214555 107067949 107067948 107068528 580 AAATGAGAGA-AATCATTGTATGTTCTTTTCTCCAAGTTTTTAAAACT-----------ATTAGCAAAGATCTTGTTTTTTGATGGGTCTCAAACTTCCCT-GACAGTTGAAAATACC-CTGTAACACAGTTTATGTAAAGCTAAAGCGTACATAACACACTTTCTTCAAGCCCACATGTAACAAATAAAGATATCAAAGGAACTGACATTTCTGCATTACAGTTTAAAATAACATCCTGTGTGACTTCTATATGCTGTGCTGTTAGTTCAATTTCAGATTTTCTAAACACCGGCTTTGCTTTCAAAGAGTAATGTTCCAGTTCCTGTAGGGAGTGTGTGGAGACTGGTTCTAAAGCTAGGGGGGAAAGTTAAGAATGTGTGGCTTTTGGCTTCAGAATTAGCCATGCTTTAGTGATCTACTGCATTAAACTGTTTCTTATTAATAGATCATGCACAATTCACCCTTCCCTCTTCCCCCCACACAAATCTGACACATTCTCATA--ATCAATAGCAAATGTGCATTCTGAAAGTTTCACTTTTTTTCTTA-AGCCCACCCTGACTTTCATTGTGATACAATGAAACCATCAGAATTT chr4 - 94230402 54641331 54641330 54641909 39588494 39588493 39589072 579 AAATTAAAGATGAGCAGTGTGCATCCCTGTCTC-----TTTTAAAACCTCTTGGATTTGCTTTGCAGACCTCCTGCTGCTTGTCAGATA-CAAGCTTCCCAAGACACGTAAAACTATCTCTGTTTCACAGTACACATAGAACAAGAACGTACGTAACCTGTTTTCTCAAAACACACGTGCTGCAAATAAAGATATCAAGTGTACTGACATTTCTGCATCGCAGCTTAAAATAACATCCTGTGCAATGCCTGTATACTGTGCTGTTAGCTCAGTTTTGGATTTTCTGAATGCTGAATGTGCTTTCAAAGAATAACGCTCCAGTTCCTGTACAATACATGAGTATATTGGCTCTTAAGCTGGGAAACAAAGTTAAGAATGTGTGGGTTTTGGCTTCAAAATTAACCATGCTTTAGTAATCTAGTATACTAAACTGTTTCTTATTAATGTATCATGCAAA---TACTCTCCAGTCCTCC-----CGCAAGTCTGACACTTTCCCAACATATCAATAGCAAATG----TTCTGTGAAATGCAATTTTTCTGATGTAGGCCACCCTGACTTTCAGCGTGATCTCAACCCACCATCCAAATCT ....x.:...-:.x..x...:::.:.:.x....-----.........:-----------x..x...:.xx..:..:.x:...x::.:.x-...:......x-....xx.:...x..:.-....xx......x:.::..:.:.x.:.:.....:....x:::.....:x..:.x...:..:x:................:x.x................::...:..................::.:x:..:...:............:...:...::........:..::.:.:x.x............:...:.:.............x::x:::..x.x.x.:...:...x.....:..:::x..................x...........:.....:............:.....x.::.:...................:x........x.---:..:..:.xx..:...-----.:...:........x...:..xx--..............----.....x:.:x.x..x.....:.xx.:-..x...............x:.....x:x.xxxx......x:...:. 10M1I22M5D10M11I30M1D11M1I16M1I338M3D16M5D23M2I14M4D26M1I46M 414/562 73.7% 579/94230402 0.0% 35/562 6.2% 52426618 NA +3037 chr4 + 190214555 107069375 107069374 107069417 43 TCCCATCTTTCTGTCCAACTCTCTCCTTTCCTCCCTTTATGAA chr4 - 94230402 93150789 93150788 93150831 1079572 1079571 1079614 43 TCTCTTCTTTCTTTCCAACTCTCTCCTTTCCTCCCCTTGCGGA ..:.x.......x......................:..::.:. 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 13918586 NA +3003 chr4 + 190214555 107081519 107081518 107081579 61 ATATACATATATACACAGACACATGCACATATATGCACATACACATATGTACATACAAATA chr4 - 94230402 53016465 53016464 53016525 41213878 41213877 41213938 61 ATATGTATCCACACATGAACATATGAATTACTGTACATGTACACATATGTACATACAAATA ....::..x:.:...:::...:...x.:xxx.:.:..::...................... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 54065054 NA +3407 chr4 + 190214555 107086335 107086334 107086514 180 AGAGGAAGGGAAGAAGGGAAGGAGAGTGGAAGGGAAGGAAGGAAGGAAGGAAGCAAAGAAGGAAGGAAGGAAGAAAAGAATGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGGGAGAAGGGTGAGCAAGTAGTAA------GAGGAAGAGTATAAAGGATAAAATTGGCAAA chr4 - 94230402 60249477 60249476 60249658 33980745 33980744 33980926 182 AAAAAATGAGGTGAAGTGAACCTGAATGGG-GATAGGAAAGGGAGG--GGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAACTTGTCAGAGACCAGCA-AAAGGCAAGAAGTGGCAGA .:.::.x.:.:x....x...xxx..:...:-.:x.:.:....:...--.......x.....:......x....:.x....:x:...:x:.:.x:..::..x.xxx.x.....x:..:x:.xx.::.::xxx::......x......x..------:::..xx..:.-.....xx.:..x.....:. 30M1D15M2D101M6I11M1D19M 108/176 61.4% 182/94230402 0.0% 10/176 5.7% 46836858 NA +11267 chr4 + 190214555 107129353 107129352 107129640 288 TATTTCTGGGAAACTTCAAAGCAGCCTTCACATACATGGGAAGACGTGAGGGGTAAAATAACTGTTTGGACAAACGTTTGCATTCCCTTAATAGTTCTAACCTCACTACAAAACATATGTCAAAATTTTAAAGAGAACAGAAACTTTTAATGCTTTGTGCAATGTACACAGTTCCTGAGCTTTGATGTTTCTATTTCTGCCCTTTATTTGTACAAAATTGTCTGG-TTAAAAAAAA-------------------TCTTTTATGTCTCATTACTGACCTGTCAAACATTATTTTAACTTAAAGAATAG chr4 - 94230402 54647819 54647818 54648115 39582288 39582287 39582584 297 TGTCTCTGTGCATCATCAAAACAGATTTCACATGATTGT-----TTTAAATAGCAAGAGGACTGCGTGGAAAGACATCTGCATTTTCTTAATAGCTGTAACCATGCTACATAGCGCATGTCAAAATTCTGAAAAGAGAACAGATTCCTGATGCTTTGTACAATGTATATAGTTTCTTTGCTTTGATGTCTCTGCTTCT-----TTATT-GTATTAAATTATCTGGATTAAAAAAGACAAAAAATAAAAAGAAGGTTGTCTTTTGTCTTATTACAGAACTGTCAAACATTATTTGAGCTAAGAGAACAG .:.:....x.x.x.x.....:...x:.......:xx..x-----:x.:.:x:.:..:.x:....:x....x.:..:.:......::........:.x.....x::.....x.:.::...........:.:..:...:x.x.:.:.::.:.........:.......:.:....:..xx..........:...::....-----.....-...:x.....:.....-........:.-------------------.x.:..x.....:.....x..x................x.:..x.:....:.. 39M5D154M5D5M1D16M1I10M19I53M 202/277 72.9% 297/94230402 0.0% 31/277 11.2% 52481534 NA +7282 chr4 + 190214555 107139884 107139883 107140119 236 AAGTTTTCTTTTCAAACTTAGATCTAAAGAATTAAACATTTGTTGATATGTATTTAATTCCAACATAAAATCAAATTGTTTAAAGCTCAAGATTTTAATGTATAACAGCTAATAAAGTGTGTAATTACAGCACTGAACTTGTA--ATGTTTGAGGAAGCACTGTGCTTCTGAATGACACATACCTAAACAATACATTAAAACTC------TATTTTTATTTCTACAATTTTTAAGTGACTTGCA chr4 - 94230402 54652760 54652759 54652998 39577405 39577404 39577643 239 AAGGTATTTCTATAAAGTCAGGACTCAACAGCTGAGCGCTTCTAGAACTGTTTTCAATTACAACATTAAGTCCAACAGTTTAAAGCCAAGACTCCTAATTTACAACAGT-----ACTTGTTAATTTACGACACAGAGCTTGTATAACGTCTAAGTAAACACTGCACTTCTGGATGACAGAAAGCTAAACAATGAAATAAAACTTCAGAAACATATCTACTCCTGCAGTTTTCAAAGTGCTTCCA ...x.x.:.:.x:...x.:..:x..x..x.::.:.:.::..x.x..xx...x..:....x......x..:..x..:x.........:x.::x.::....x..:.....:-----.xx...xx.x....::...x..:......--.:..:.:..x..:.....::......:......x.x.x.........:x.x.......:------:..x.:..:.:..:..:....:..:xx:...x.. 109M5D29M2I59M6I34M 154/231 66.7% 239/94230402 0.0% 13/231 5.6% 52487124 NA +3019 chr4 + 190214555 107141940 107141939 107142056 117 CTAGTTCATACATATATATATATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982590 70982589 70982681 23247722 23247721 23247813 92 CTATTTCATATATATATTTATTCATGTA-------------------------ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...x......:......x...x::...:-------------------------.:x.x.x.x:x...........:........:....:.x:...x..:.:.:.::...:.:.:.. 28M25D64M 64/92 69.6% 92/94230402 0.0% 25/92 27.2% 36159350 NA +3168 chr4 + 190214555 107141982 107141981 107142032 51 TGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ....x..x.....:.::.:........:....x.x......:......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 59052485 NA +3359 chr4 + 190214555 107141982 107141981 107142048 67 TGTATGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959562 32959561 32959628 61270775 61270774 61270841 67 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ..:.xx......:x.:..::..x....x.....::...:.......:.......:.x......x:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 74182420 NA +3005 chr4 + 190214555 107141999 107141998 107142039 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 17320718 NA +3036 chr4 + 190214555 107142002 107142001 107142041 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 17320720 NA +4636 chr4 + 190214555 107154044 107154043 107154297 254 TTAGGAACTGATGACTTAATATTGTGTTAGCATGCCCCTGGCACTGTGGTGGAGAGTCTCAGCATGAAAGAGTGGCATAAAGA-----AAACGTTCTTCCTCCCTCCCACAGAGACGAGAAT-TCCATCACACCATCATCTCTGCTCTTTCCCTTTCCCCCCACAGAGCTTAAAAAATCTGCCTAGAATGTACATTCCACAGTCCTCTGAAGTATTATAGTAATATTAATAAATTCTTCACATGACATTT--GGACAAAAGC chr4 - 94230402 54655978 54655977 54656230 39574173 39574172 39574425 253 TTGGAAACAGAGGACTCAAGTTTGTGTAGGGGTGCCACTAGGGAAACAGAGCAGGGGCTCATGGTGCCAACCTGGCACAGTGACCTCCAGCACTCCTGCCTCCCTT-------GAGGAGTTTCTCTACCAGCCCGGTTTCTCTCCTCACTTGCCTTCCCTTCT--GGGCTAAGAAAACCCTGTCATTATGGACATTCCACATTCCTCTTGCATATCAAGGAGATATTAATACATTCCTAGCATGGCACTGAAGGGAAAAAGC ..:.:...x..x....:..xx......x:.x:....x..:.x:xx:::.x.x..:.x....xx:..xx.:xx.....:.:x..-----.:xxx.:..x.......:-------..x...xx.-..:.:..xx..:x:x.....x...x:.:x.:.....::.x--.:...x.:....:.:xx::.xx...x..........x......x:x:...:.x:.x:.........x....:.x:....:..:.x--..:x...... 83M5I18M7D9M1I40M2D85M2I10M 152/245 62.0% 253/94230402 0.0% 17/245 6.9% 52498066 NA +12138 chr4 + 190214555 107194214 107194213 107194500 287 CCATTTAGCAAGAACAGCCCAGACCTTTCTTTC---AATTTTATCAGAAGCCACTGATCCTAAAGTATCACTGGCGCCTACTGAATTTTCACCAGGGACCTAACAGAAAACATCTGTTCTCTTACTTAAAACTAAATCAATTGATTAAATCAACGTTTGCTTGCTCTC----TTCTAT----TAGAAGCATAGCTATTTCTCTTTTTCTTCTCTCCTGACTCCTTTAGCAAGTTACTTCTGCTTATGAGTTAAAATCTGGGATA--AAGG-------TGTGTCTCCTTCTGTGCCTACATGGGGAAA chr4 - 94230402 54665620 54665619 54665923 39564480 39564479 39564783 304 CCATTTGGTAACAATAGAACAGACATCAATTTTCAAAATCTTATCAGAAGTCACCAGCCCATAAGTATTAGTGGCGCCTACTGAATTTTATCCAGGGGCCTAACAGAAAACATCTGTTCTTTTATTTCACAGCAAATCAATAGATTAAATCAACGTTCTCTTCCCTCCACCATTCTGTTCAATAAAGGCATAG---GTTTTCTTTCATTTTTCTTCTACTTCTTTTAATAACTTGCTTTTCCTTGCAAGTCAAATCCAAGTATATTATGGAGATTTCTGTGTCTCTTTCTGGGCTTACTTGGGGAGA ......:.:..x..:..xx.....x.:xx...:---...:..........:...::::..xx......:.x..................xx......:......................:...:..x.x.x:........x...............:x...x.:::.----....:.----..:.:......---x..:.....:x:..:...:..:x:..:....::..x..:...:.x...:::...:...x:.x:.x...--.x..-------........:.....x..:...x......:. 33M3I132M4I6M4I11M3D68M2I4M7I30M 212/284 74.6% 304/94230402 0.0% 23/284 8.1% 52528594 NA +3011 chr4 + 190214555 107206465 107206464 107206524 60 ACGTGTGTGCGTGCAGGCGTGTGTGTGTATGCACACACACACACACACACACACAAACCA chr4 - 94230402 25393259 25393258 25393318 68837085 68837084 68837144 60 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCA .:.....:::...:.x.::...:.x...:..:............:.....::x.xx.... 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 81813206 NA +9319 chr4 + 190214555 107211818 107211817 107212016 199 TACTGCATTAAACAGACTGCTTTCCAAACTCTGCAATGGACAATTTAGTCTAAACCACCGTGTGAAGTGTGGATAATAGAAACAGGAAACCTGGGCCTTCCAGTGGAACTAATCTTTGTGAAATAGTCATAGCCTTATGAAACCATAAAAAGCAAAGCCGCTTCACCATATTATTTATTCCATACTAGCATCATCTGGA chr4 - 94230402 54669152 54669151 54669348 39561055 39561054 39561251 197 TACCACAGCAAAGTGAACGTCTTCTAAAACCAGGAAGGGGTAGTTTAGTCTAAACCACAGTATAAGGTGTGAATAATAAAAACAGGAAGCTTGGGATTTCCGATGG-ACTAATCTTTATAAAATAGCAATAGCCCCAGGGAACCATAAAAA-TAAAGCCACTTGACCATATTATTGATTTTATGAAAATATGTTCCAGA ...::..x:...xx..x:.::...:...x:.x.x..x..::.:...............x..:.:.:.....:......:.........:.:....x:....::...-..........:.:......:x......::.x.:...........-:......:...x...........x...::..:xx.::..xx..::.. 106M1D44M1D47M 143/197 72.6% 197/94230402 0.0% 2/197 1.0% 52542666 NA +9190 chr4 + 190214555 107221486 107221485 107221830 345 AAATGAGTCCATCTGCTAAGCCCAAAATATGAGTTTTTCATAAAATGCAGATGCAATAACAGACTCAAAGCATAAGAGACTTTTATAC----AACCCATTAAGCAATAGTCAACCCCTTCCTTTTGTAAAAAGAGAAATGAAATGTATCATCTTCTAACCAATACAATAAGTCCTACTAGTTTAAGC-TTTGATGTTACCATATGAAGCATTCTTTCTCTATTATGTTCAAAATCGTGGAGAACATTCTGATAATAAGACCTA---TCTTTATGA-CCTAATTGATTTCCTGTGTTAATGCTAAGGAAATAATGAAGGAAACTTTTGAAGTTTAAGCTCCCCATTAATCCATGG chr4 - 94230402 54675083 54675082 54675417 39554986 39554985 39555320 335 AAATGAGTCCATCTGTTGTGCTCTGAGTAAGATATTCCCATAAAATACAGATGCAATAAGAGATGTACACTTGCAG----TCTCATGCTTTGGAGTTAAGGAGAAAAAGCTAA-AATTTCTGTCTAGAAGAAAAAATATCTAAGGCA---------AACCAAC----TAAGCACGAATGGCTTCATCTTTTGATGTTGCTGGATCAAGCATTCTTT-GCTGGCATGTTCAGAATCAAAAGAAACATCCTGATAATGAGACATAGTGTTTTTGTGATCTTTTTTGATTTCCTGTATTAACATTAATGAAATAAAGAAGGCAACATCTGAAGTCTAAGATCTTCATTCTTGCATAG ...............:.:x..:.x:.:..x..xx..::........:............x...:x:.x.x:xxx..----.:.:..:.----:.x::.xx:..x..x..::..-xx:...:x.:.:x..:..:.:.x..xx..x.:.---------......:----....:x.x.x.:.:..x.x.-.........:.::x..x...........-x..:x:.......:....:x::::.....:........:....x..---.:...:...-.:.xx............:....:::...x.......x.....x...x.:......:....x..::....xx.x...:. 76M4D8M4I21M1D33M9D7M4D20M1I28M1D46M3I9M1I78M 223/326 68.4% 335/94230402 0.0% 28/326 8.6% 52546403 NA +3202 chr4 + 190214555 107236517 107236516 107236561 45 CCTCTTCATCCAGCAGCACCAATTCTGCTTACCAAAAATGTCCCA chr4 - 94230402 14951850 14951849 14951894 79278509 79278508 79278553 45 CCACTTCATCCTGCAGCGCCACTTCTGCTTACCAAAAGTGGCCCA ..x........x.....:...x...............:..x.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 92284667 NA +3263 chr4 + 190214555 107256389 107256388 107256462 74 ATCTTTGTTTTGTTTTT---------------TTTTTTTCTGTTTTGTTTTGTTTGCTTGTTTTATTTTGTTTTGTTTTGTTTTGTTTT chr4 - 94230402 82822556 82822555 82822644 11407759 11407758 11407847 89 ATTCTTGTTTTGCTTTTGGGGTTTGGGGCTGTTTTTTGTTTGTTTTGTTTTGTTTGTTTGTTTTTCACTCTTTGATTTTTTTATGCTCT ..::........:....---------------.....x.:................:.......x:x:.x...x:....x..x..:.:. 17M15I57M 57/74 77.0% 89/94230402 0.0% 15/74 20.3% 24433833 NA +6956 chr4 + 190214555 107258289 107258288 107258668 380 TTTGAGAATCAAATACTCCCATGCTTCTCTTCTGAATAACTTCTGA---ACTGTGTACAACCTTATGGTAATCATAACCAATGTTTCAGGAACTAATGCTAAAATGAAATGTATCCGCAGTTTCCGACTGGGGAGGGGCACTGTTTTTCTCTGTGCAGCTGCTTTGCTTTCTGCCCTTCTCAACAACATCAGTACCAGCATCAGTTTTCTCC----TGTGGTTTTTCTATTGGGATCCAGCCAGGCTTCATCATTTCCTGTCTATCCAGTGATCCATCCCAGCCCTCATAATCAGCTACTCTGCTGTGACCCACT---CCTTGGCTCCTTACCTCAGGCTCAGGAGACCTTGGGGCTGGA-AAACAATGGGTTGTTTCTGTCCTCTTTCTC chr4 - 94230402 54685945 54685944 54686294 39544109 39544108 39544458 350 TTAGAGAATTAA----CCCCCTCGTTTTCTTCAGAACAGATAATAAGTAAATGTTCATACAATAGTGGTAAAGATAACCAATTTCTCAGACTCT---GCCAAAATGAAATATGTCTGCAATATAGTA-----------------TTTTCTAGGTCC---TTTTTTATCTCGTGTCTATCTGAA--------------GCATCAGCTTTCTTCACTGTTTTGTTTCACAGTAGAGAGACTGCCAAGATTCATCATTTCCTGCTTAAGCAGCAATCTAAACCAGACCTTTTAATCAGATTCTCTATTGTGAATCCTTTTCCCTTGCACTTTTACCTAAGATTCATGTGCCCTCTGAATTAGAGAAGTGGTGGTTTATTACCGTTTTCTCTTCC ..x......:..----:...x.xx..:.....x...:.:x.xx.:.---.x...x:.:.xxx.x:......xx.........x.:....:xx..---..:..........:.:..:...:.x.xxx.-----------------......xx..x.---.x:...:::.:x..:.:x...x..--------------.......:.....:.----.x.x....:x.x:.x.:..xx.x....:.x..............::..xx...::...:.xx....x...:x.......x.x....::.....x:.x:.---.....xx:::......x..::...x.x.x...:x.:::.:..-..::::...x..:..x.:..::...:.::. 12M4D30M3I45M3D30M17D12M3D24M14D15M4I99M3I42M1I30M 221/339 65.2% 350/94230402 0.0% 52/339 15.3% 52572344 NA +4191 chr4 + 190214555 107307388 107307387 107307535 148 ATATACACACATATACATATATACATACATATGTGTGTATATATACACATATATATACATACATATGTGTGTATATATACACATATATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTG----CAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACAC ..:.:.......x.:...::.:...:..:.x..:.:::.:.:..:..x..::...:..:..x..:......----:.x....x.::::...:..:x...:...:x:..:x:....:x.::..---.:.xxx....:x:....x:.... 71M4D47M3D23M 87/141 61.7% 141/94230402 0.0% 7/141 5.0% 18291306 NA +3546 chr4 + 190214555 107307389 107307388 107307494 106 TATACACACATATACATATATACATACATAT--GTGTGTATATATACACATATATATACATACATATGTGTGTATATATACACATATATACATACATATGTGTGTATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:..::.....x....:.:.:.....:.x--.::..x:..:....::...x:..:..:x::.......x...:.....x.:.:::x:...x.x.:.::::...... 31M2I75M 66/106 62.3% 108/94230402 0.0% 2/106 1.9% 34186287 NA +3918 chr4 + 190214555 107307455 107307454 107307603 149 TGTGTATATATACACATATATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACAC chr4 - 94230402 89016083 89016082 89016222 5214181 5214180 5214320 140 TGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG------ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACAC ....:.:.:..x::...::.:...:..:.x..:.:::.:.:..:..x..::......:..x..:......:.x------...:x.:::....:..:x...:...:x:..:x:....:x.::..---.:.xxx....:x:....x:.... 73M6D44M3D23M 85/140 60.7% 140/94230402 0.0% 9/140 6.4% 18291372 NA +3094 chr4 + 190214555 107307492 107307491 107307549 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89786739 NA +3696 chr4 + 190214555 107307492 107307491 107307637 146 ATATATACACAT----ATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG------ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACAC ..:.::......----..::.....:..:.x..:.:::.:.:..:..x..::......:..x..:......:.x------...:x.:::....:..:x...:...:x:..:x:....:x.::..---.:.xxx....:x:....x:.... 12M4I58M6D44M3D23M 86/137 62.8% 141/94230402 0.0% 13/137 9.5% 18291410 NA +3094 chr4 + 190214555 107307526 107307525 107307583 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89786773 NA +3094 chr4 + 190214555 107307560 107307559 107307617 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89786807 NA +3581 chr4 + 190214555 107307560 107307559 107307679 120 ATATATACACAT----ATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG------ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:.::......----..::.....:..:.x..:.:::.:.:..:..x..::......:..x..:......:.x------...:x.:::....:..:x...:...:x:..:x:....:x.::.. 12M4I58M6D44M 72/114 63.2% 118/94230402 0.0% 10/114 8.8% 18291478 NA +3094 chr4 + 190214555 107307594 107307593 107307651 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89786841 NA +3470 chr4 + 190214555 107307594 107307593 107307717 124 ATATATACACAT----ATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATAC chr4 - 94230402 89016082 89016081 89016199 5214204 5214203 5214321 118 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTG----------CAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC ..:.::......----..::.....:..:.x..:.:::.:.:..:..x..::......:..x..:......----------..x.:.:x::.::......:x...:...:x:..:x:....:x.::.. 12M4I55M10D47M 72/114 63.2% 118/94230402 0.0% 14/114 12.3% 18291512 NA +3147 chr4 + 190214555 107307628 107307627 107307687 60 ATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..x:..:x.:....x...:..::.:.:...:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 89786875 NA +3011 chr4 + 190214555 107307650 107307649 107307711 62 ACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACAT chr4 - 94230402 4481692 4481691 4481753 89748650 89748649 89748711 62 ATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .:...x......:...:.:....x.:........x....:.:x:xx:::.....:....... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 102825958 87388597 +3686 chr4 + 190214555 107307658 107307657 107307735 78 GTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGT chr4 - 94230402 27943551 27943550 27943628 66286775 66286774 66286852 78 GTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .....:.:..:....x:.:.:..x...::.....:.:....:x:.....:x..x..:.x........:x..:.:.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 79364107 NA +3744 chr4 + 190214555 107307682 107307681 107307773 92 ATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATGTGTGT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x:..:.:.:xx.....:.:..:....x:.:.:..x...::.....:.:....:x:.....:x..x..:.x........:x..:::.... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 79364145 NA +3111 chr4 + 190214555 107307687 107307686 107307749 63 CACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACAT chr4 - 94230402 4481691 4481690 4481753 89748650 89748649 89748712 63 CATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ..:...x......:...:.:....x.:........x....:.:x:xx:::.....:....... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 102825996 87388559 +3560 chr4 + 190214555 107307720 107307719 107307809 90 ATACACACATATGTGTGTATATATACACATATATACACATACACACATGTGTGTAT--ATATACACATATATACACATACACACATATGTGT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x:..:.:.:xx.....:.:..:....x:.:.:..x...::.......:...::--.....:x..x..:.x........:x..:.:.... 56M2I34M 61/90 67.8% 92/94230402 0.0% 2/90 2.2% 79364183 NA +3025 chr4 + 190214555 107307738 107307737 107307797 60 ATATATACACATATATACACATACACACATGTGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x...........::::x:..:x.:....x......::...:.:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 89786985 NA +3507 chr4 + 190214555 107307740 107307739 107307815 76 ATATACACATATATACACATACACACATGTGTGTATATATACACATATATAC-----ACATACACACATATGTGTGTATAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACAT .......:.:...:......:.....x.........:...::.:x.....x.-----.::..:.x.:.x..:x.....:.. 52M5I24M 56/76 73.7% 81/94230402 0.0% 5/76 6.6% 45822367 NA +3052 chr4 + 190214555 107307749 107307748 107307823 75 TATATACACATACACACATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACAT chr4 - 94230402 4481679 4481678 4481753 89748650 89748649 89748724 75 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT .:...::::x.x..:.:.x......:...:.:....x.:........x....:.:x:xx:::.....:....... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 102826070 87388485 +3869 chr4 + 190214555 107307761 107307760 107307847 87 CACACATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGT chr4 - 94230402 27943542 27943541 27943628 66286775 66286774 66286861 87 CATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ..:...:xx.....:.:..:....x:.:.:..x...::.....:.:....:x:.....:x..x..:.x........:x..:.:.... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 79364219 NA +3866 chr4 + 190214555 107307794 107307793 107307885 92 ATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x:..:.:.:xx.....:.:..:....x:.:.:..x...::.....:.:....:x:.....:x..x..:.x........:x..:.:.... 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 79364257 NA +3988 chr4 + 190214555 107307832 107307831 107307923 92 ATACACACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACATATATACACATACATACATATGTGT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x:..:.:.:xx.....:.:..:....x:.:.:..x...::.....:.:....:x:.....:x..x..:.x.........x..:.:.... 92M 62/92 67.4% 92/94230402 0.0% 0/92 0.0% 79364295 NA +3111 chr4 + 190214555 107307837 107307836 107307899 63 CACATATGTGTGTATATATACACATATATACACATACACACATATGTGTGTATATATACACAT chr4 - 94230402 4481691 4481690 4481753 89748650 89748649 89748712 63 CATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ..:...x......:...:.:....x.:........x....:.:x:xx:::.....:....... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 102826146 87388409 +3378 chr4 + 190214555 107307870 107307869 107307951 82 ATACACACATATGTGTGTATATATACACATATATACACATACATACATATGTGTGTATATATACACATATATACACATACAT chr4 - 94230402 27943537 27943536 27943618 66286785 66286784 66286866 82 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACAT ...x:..:.:.:xx.....:.:..:....x:.:.:..x...:::....:.:....:x:.....:x..x..:.x......... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 79364333 NA +3047 chr4 + 190214555 107307888 107307887 107307946 59 ATATATACACATATATACACATACATACATATGTGTGTATATATACACATATATACACA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .......x...:.x............:::x...:x......x.:...:::.....:.:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 89787135 NA +4058 chr4 + 190214555 107307888 107307887 107308035 148 ATATATACACATATATACACATACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATGTGTGTATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAG------ACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGC-TGTGCCCATATCCACAC ..:.::......x.::.::..:...:..:.x..:.:::.:.:..:..x..::......:..x..:......:.x------...:x.:::....:..:x...:...:x:..:x:....:x.::..xxx.:.-....:x:....x:.... 74M6D50M1D17M 86/141 61.0% 141/94230402 0.0% 7/141 5.0% 18291806 NA +3094 chr4 + 190214555 107307926 107307925 107307983 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89787173 NA +3803 chr4 + 190214555 107307926 107307925 107308067 142 ATATATACACAT----ATATACACATACATATGTGTGTATATATACACATATATACACATACATATGTGTGTATATATACACATATATACACATACATGTGTGTATATATACACATATATACGCATACATGTGTGTATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTG----CAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGC-TGTGCCCATATCCACAC ..:.::......----..::.....:..:.x..:.:::.:.:..:..x..::......:..x..:......----:.x....x.::::.....::x...:...:x:..:x:....:x.::..xxx.:.-....:x:....x:.... 12M4I55M4D53M1D17M 86/137 62.8% 141/94230402 0.0% 9/137 6.6% 18291844 NA +3094 chr4 + 190214555 107307960 107307959 107308017 58 ATATATACACATATATACACATACATATG--TGTGTATATATACACATATATACACATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .......x...:.x............:..--..:x.:....x......::...:.:.... 29M2I29M 46/58 79.3% 60/94230402 0.0% 2/58 3.4% 89787207 NA +3427 chr4 + 190214555 107308031 107308030 107308103 73 TACACATATATACGCATACATGTGTGTATATATACACATAT----ATACGCATACATATGTGTGTATATATACACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT ....::x.....x..:.......:......:....:..:..----...::x.:x:..........x......xx... 41M4I32M 55/73 75.3% 77/94230402 0.0% 4/73 5.5% 54826795 NA +3011 chr4 + 190214555 107308408 107308407 107308472 65 ATATATACACATACACATATATATACACATATATACATATATATACACACATATATACATATATG chr4 - 94230402 48167041 48167040 48167105 46063298 46063297 46063362 65 ATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ......xxx....:.::......x...:.:..:x....:.::x:.:......:..:....:.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 59141367 NA +3139 chr4 + 190214555 107308741 107308740 107308807 67 TGTGTATCTATATGTGTATATATGTGTGTGTTTATATATATATATATATATATATATGTGTGTGTGT chr4 - 94230402 32959568 32959567 32959634 61270769 61270768 61270835 67 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT ......:.....::..x:.:.x.....::..x::......:.......:.x......x::..xx... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 74349173 NA +8272 chr4 + 190214555 107311961 107311960 107312182 222 ATTGTGGTTTTGAAAAATATTAATTTAGTCAAAGCAGGGGCATATCCTGATGATAAAGGAATGATGTTGATGAAATGAATTTCTGTAATAGAAAATAATCT----TGATGAGATCTAGACTGATTTTGACACAAGG--ATTTTAAATACATCTAATGTTTGTTACAATAGAGTTAACTATCAACACATTTCCTTTAAAGTTCTTCCAGACAGTCTGTTTAAAATGACA chr4 - 94230402 54709154 54709153 54709380 39521023 39521022 39521249 227 ACTGTGGTTTCTGGAGCTATTTAGTCTAACAAAATGTGGGCAGATCCTGCCGATAAAGGAATGATTTAACTGAAATGAATTTCTATAATCAAAAATAAACTAGGATGGGGAAATCCAGACCAGCCTGAATGAAAGAGCACTTTAAAAACATCAATTATTTGTTGCAGCACAGTTAAATATTAATGTAGCCTCTTTAAACTCCTTCCAGTCAATC-ACAAAAAATGACA .:........:x::.:x....x.x.:x:x....:::x.....x......x:..............x.x:x..............:....x:.......x..----..:x..:...:....:::::.x:.::x...:--.:......x.....x.x.:......:..::.x......x...:..:::.x:::.......x.:.......x..:..-::xx......... 101M4I31M2I76M1D13M 152/221 68.8% 227/94230402 0.0% 7/221 3.2% 52602807 NA +3250 chr4 + 190214555 107336651 107336650 107336733 83 CTGCAACCTCTGCCTCCTGAGTTCCAGCGATTCTCTTGCCTCAGCCTTTTGAGTAGCTGGAATTACAGGCACCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:...:....x..:.x...x.xx.x..........::...........:....x.::.--:....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 89139525 NA +7401 chr4 + 190214555 107349866 107349865 107350234 369 TTTGATCTGTAGTGT-GAGAAATCTATCCTGCTGAGAAAATGAAAACAGTCTCTGCTTTTCTCATTGTCATCCATGCATGCTGCTTACTGGGCTTCTCCTTGAAAGCAGTTG---ATTTGCATGATTAAGTACTTACTTGGTTTGG--------------------TGGGGTTTTTTGAAACTCAAAGGAC---TTATATTGAAAATCTATTTTTGTTTGCTTTTGAATGGAATGCATTTATTTGGGGGATGTAAACTTCTGGGATTTGTGGTAAATTTGAAATCTTAATTCTGTTACATACTCTTGGATGGGTTGTTTAGTTGAGGAACTATATTTAGCTTGAGATTTAAACACCTAGATTGTAATAATTTTTTGAATGCAAATTTCATATCTAA chr4 - 94230402 54717884 54717883 54718260 39512143 39512142 39512519 377 TTTAATCTGGAGAACAGAGGAATTTGTCACATACAAGAGATGAAAATAATCT-TGTTCTTCTCACCACTACCTAGGCATAATGGTTATTGGCTGGGTCTTCATAAGAAGTTGGAGATTATGATGACTATTTACTAACTTTATCCTGCATAACTGTTCTAAGAGGGCTGGTATTTTGCTTCACTCCAAAGACATCTTATGCTGAAAAATTATTTTTGTTTGGCATTTGCTGGAAAGCACTTGTTTTGGGAATGTGTGCTTCTGGGATTTGTGGTGGGCTCAAAGTTTCAACTGTACGTCATAGTATACTACTTGTTACTTGGTACAGGGTTTA----------------TCAACACTT--ATTCTAAGAATCTTCTATATATACAACCCATTTTTGA ...:.....x..x::-...:...:.:..x:::xx.::.:.......:.:...-..:.:......:::::.:.:.x....:x..x...:...x:xxx..:.::x...x.....---...xxx....:..xx....x....x:.::x.--------------------...x:....x:xxx....x..:...---....::......x:............x:x..x:x.....x...:..:...x...:....:x:.................::::.::..:.:.:..:.x.::xx....x.x.xxx.:xx...::..:..xx...:x:..----------------.x.....:.--...x...x...:..:.:x..::.x.x::...x.:.:. 15M1I36M1D59M3I31M20I25M3I138M16D9M2D37M 220/350 62.9% 377/94230402 0.0% 46/350 13.1% 52631982 NA +3214 chr4 + 190214555 107397907 107397906 107397950 44 GAAAGAGAGAGGTGTAGAGAGAAGAAATCAAATAAATAAGGCCA chr4 - 94230402 4768422 4768421 4768465 89461938 89461937 89461981 44 GAAAGAAAGGGGTGAAGAGAGAAGAGATCAAATAAATAAAGACA ......:..:....x..........:.............:.x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 102629485 87585070 +18916 chr4 + 190214555 107404616 107404615 107405299 684 TTAAGTGGAAGTAGTTGCATCTTCACAACTATTT-TAAAATGCAGTTAGATA--GTAATATAATACACTACAGCTGG--AAAATGAACAATCCATTTTTCCTCTTCCTAGACAG---------------GGTCATACTGCTGAGCATACT-----CGAGTTAAGTGTGATACAGAAGTTAAGCCATAAATTCAATGAGATGGAAGACTCTGGCATCCGAGGCACACGCACGGTCCAGTGTCAGAGGGGCTTACACTCAATTCTCTCTGTTTTACTTAAAAATTCTCAGTCCTTATTAACAAATAACCTCTCTATTAAGAAAAAAAATTATTTTATGGACCAGATAAACAAAAGACACTGTCATTTTTAAACCAAAACATATTTAAGAAATAAAATGTAAGTGAAACTAATTTGCTACATATGTTTTATACATACAGTACATAAGGGGGTTTCCCCAACGCCATATGGAAAGCATCTGAATTTGTAAGACAATGACCTTCATAAATCACTCTAGGCTCCAACTCCAAATTATGTCTTGTTCCCTCACTCATGGGATAGTCACTATATCTCATATAAATTCATTATGTTATATGTGCACAATAATCTATCTCTACCTTTATGAGGAATGATGTCATAAC-ACATAGGCAAGGTTTTCGA---GAAAAGGGAACAAGCT---------CTCTCACCAGATGGGCCAACCTATAGTACTGTTTCTC chr4 - 94230402 54723963 54723962 54724650 39505753 39505752 39506440 688 TTTAATATAAGTAGTTCCATCTTCA-AGCGATTTCTAAAATAAAATGAGATACAGAATTATAAGTTGCTGCAGCTGGTAAGAAAAAAAAATCTGTTCCTTTCATACTTGGTCAGTTCCTTCAGGGCTTCAAGCATGATTCAGAGCATACTATGTATCACCTAAGCATGATACAGAAGTAAAGCTATAAATCTGGTGCAATAGGATGTTTTAGCATCAGAAGTACCTCCA-GGTTTATTGTCAA------CCAAACCAAACTTCAGTAGAGTCATCTCAAAATCTGC----CATGTTAAAGTATA--CTTTCAATAAAAGTAAACTGAGATATCACAGATGAGATAAA---AATACACCACGATTTTTAAATCAAAGCATTTTAGAGGAAACTTATGTA---GAAACGAATTTGCTACACAT--TATATGCATACCATACAAAAATGGGTTTCTACAAC---ATATGGAAAGTATCTGAATCACTAAGACAATGACCTTCATAAATCACTCCTTGTTTCAACTTTAAATTATGTCTTGTTCTCT--CTCATGGGATATTCACTGTATCTCATACAAACTTAT--AGTTGTGTATGCACAGTATTC-----CTACCTTTATAGAGAATTATGTCATATCAACACAGAGAGGGTACGTAAAACAAAGAGTAAACACATTTTTATGAGACTCTGACCAGACGGACCCACATACTTCACTTTTTATC ..x.:.:x........x........-.:.x....-......:x.:.x.....--.x.x.....xx::..:.......--.:..x:..x....::..::.:::x.x.:.:.x...---------------::x...:x.x.x.........-----:x.x:....::............x....:......::::..x:..:.:.x::.:.:.....x..:.:..x:x..-...::.x.....:------::.x..:x..:.::xx:x.xx.:.::.x.....::x.----.x.:....x:x...--..:..x..x..::x...xx:xx..x.:.::..:x.......---..x....:::x.........:....:...x..x:..:..xxxx.....---.....x...........:..--.x...:.....x:....x..:x.......:x....---..........:........:xx...........................:xx.:.:.....::................:..--...........x.....:.........:...:.:..--x...:.:.:......:..x..-----..........:::....x........x.-...:..:x.:...x:x::.---:..:..x:....x::.---------....x......:..:..x..x..:xx:...x...x.. 25M1D8M1I17M2I23M2I35M15I21M5I74M1D13M6D37M4D14M2D41M3D48M3D20M2D35M3D82M2D36M2D21M5D28M1I19M3I16M9I37M 454/650 69.8% 688/94230402 0.0% 72/650 11.1% 52680653 NA +3758 chr4 + 190214555 107405072 107405071 107405137 66 TGTAAGACAATGACCTTCATAAATCACTCTAGGCTCCAACTCCAAA---TTATGTCTTGTTCCCTCACT chr4 - 94230402 56565943 56565942 56566011 37664392 37664391 37664460 69 TGTAAGAGAATGACCTTCATAATTCACTTCAGGCTTCACCTCCAGAGTGTCATGGCTCATTTCCTCATT .......x..............x.....::.....:..x.....:.---.:...x..::..:.....:. 46M3I20M 53/66 80.3% 69/94230402 0.0% 3/66 4.5% 50839129 NA +3611 chr4 + 190214555 107407472 107407471 107407607 136 AAAAGAAGAAAGAAAAGG-AAAGAAAAGAAAGGAAAAGAAAGAAAAGAAAGGAAGAAAAAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAAGAAAAAA chr4 - 94230402 65901805 65901804 65901939 28328464 28328463 28328598 135 AAAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAG---GAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGACAATATAAAATGGAAAAA ........xx.:..x...-:...:...x..:x..:x..---....x.x..............xx..::x:..:.....:.:x::..x...x:..:.xx:...x.x.:..:..:.:.x...-..x.x.:..x.:..... 18M1I19M3D79M1I17M 89/133 66.9% 135/94230402 0.0% 5/133 3.8% 41505667 NA +3875 chr4 + 190214555 107407496 107407495 107407616 121 AAGAAAGGAAAAGAAAGAAAAGAAAGGAAGAAAAAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAAAATGGGGTGAT chr4 - 94230402 44053989 44053988 44054105 50176298 50176297 50176414 117 AAGAATGGAGGAGAAAGAAAAGAAGG-----AGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGAT .....x...::.............:.-----.:.x......:x.:.:.:.x::.xxxx:.............::x..:..x...-.x......x::..::..x..x.x....:....xx... 26M5D53M1I37M 80/116 69.0% 117/94230402 0.0% 6/116 5.2% 63353507 NA +3461 chr4 + 190214555 107407513 107407512 107407607 95 AAAAGAAAGGAAGAAAAAAAGAAAGAGAGAAAGAAA----GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAA chr4 - 94230402 30533165 30533164 30533263 63697140 63697139 63697238 99 AATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAA ..x.:...........:...::.:.:....:.:.:.----....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.... 36M4I59M 63/95 66.3% 99/94230402 0.0% 4/95 4.2% 76874348 NA +3330 chr4 + 190214555 107428073 107428072 107428144 72 TATATATATATACACATGTATGTATGTATATACATGCACACACATATGCATATTTATATGTGTA-TCATATAA chr4 - 94230402 52481236 52481235 52481308 41749095 41749094 41749167 73 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAA ..:..:x.....x:.:.::...........:.:.:.....:..xx..::.x.:..........:-.:...... 64M1I8M 52/72 72.2% 73/94230402 0.0% 1/72 1.4% 54946837 NA +3243 chr4 + 190214555 107444525 107444524 107444624 100 TAATTCTTTATTTATTTTATTTATTTATTT----------ATTTATTTATTTTTGAGATGGGGTCCATGTGGTTTTTTTTTTTTTAATTCTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 26633355 26633354 26633464 67596939 67596938 67597048 110 TAATTTGTTCTTAATCTTGTTCTGTTAGTACGAGATGGAAAGTTACTTGGTTTTGGTTTTGGTTTCGGTTGGCTTTTTTTCTGTTGGGTTTTTTTTTTTTTTTTTTGAGA .....:x..x..x..:..:..:xx...x.x----------.x...:..:x.....:xx.x..x.:.:xx...:.......:.x..::x.:.................... 30M10I70M 69/100 69.0% 110/94230402 0.0% 10/100 10.0% 80811170 NA +3260 chr4 + 190214555 107457395 107457394 107457450 56 CTGCCTCCTTCTCAATATTTAGATCTCTGTTCAAATGTCACTTGCTCAGAGAGAGT chr4 - 94230402 24889003 24889002 24889058 69341345 69341344 69341400 56 CTGCCTTCCTCTCAATGTTTGGATATCTGTTCTTATGTTACTTGATCAGATAATGT ......:.:.......:...:...x.......xx....:.....x.....x.:x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 82568392 NA +7245 chr4 + 190214555 107533520 107533519 107533795 276 TTGTACAGAATAAATTTATTCAGTATTAGCAATATAACAAGTAAAATATACTTGCATTTGTTTGATTTACAAATATATGTCTGAATTAGGACCAAACTATTTTAAAAGTTGTTTTAAAACGTCATCTACTACATATTTGCGATAACCCAGGGACTCATTAACTTTTATAATACCAAGAGCCAAGAAGAAATTATGAACGAATACTTTGGGAAAACAAAATC----GGAGAATGATTAAGTCATTT----------------------AAAGAAGTAAAGTTCTTATTATTCATTAGAAGATT chr4 - 94230402 54749204 54749203 54749480 39480923 39480922 39481199 277 TTATGGAAAATGAATTGACTCAATGTGA-----ATAATAAATAAGA-------GCA--------ATTTACAAATAGCT--TTGGGTTGAAACCAAACTATTTGAACTGTTGTTTAAAAAGGTCAGCTAACCAGTATTTATTATAGTTCAGGGACTCATTAGCTTACATAATACCAAGACACAGGAGGAATTTATAAAGAAACTCTTTTTAAAAGAAAGGCCTTCTGGGGAACGGTT---TCAATTGTCCTCATCCAAACTTAAAAAAAAAAAGAGAAAGCTTCCATTAGTCATTAAAAATTT ..:.:x.:...:....x.:...:.:.x.-----....:..:...:.-------...--------...........xx.--:..::..:::............x..xx.......x....x....x...x:xx:.....::x...:::.............:...x:............xx..:..:...x....:..x:..:x....xx:...:x..:::.----..:...:.:..---...x..----------------------...:.::x....:.:::....x......:..:x.. 28M5D13M7D3M8D14M2D141M4I11M3D6M22I35M 176/251 70.1% 277/94230402 0.0% 51/251 20.3% 52784316 NA +3328 chr4 + 190214555 107556276 107556275 107556348 73 TATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATAT chr4 - 94230402 73418583 73418582 73418655 20811748 20811747 20811820 73 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGT .:..:..x..:.........x:.:.........x.:.:......x...x.x.....xx...:...x.x.:.:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 34137693 NA +3250 chr4 + 190214555 107556283 107556282 107556358 76 TTATATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATATTTATATATAT chr4 - 94230402 37363039 37363038 37363111 56867292 56867291 56867364 73 TTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTAT ..:.:..:...:..:......:..x:.:.x.......x:.:.....x.:...:....:.:.:.:.---....:... 65M3D8M 52/73 71.2% 73/94230402 0.0% 3/73 4.1% 70193244 NA +3125 chr4 + 190214555 107558917 107558916 107558985 69 TTTCTGAGTTCTTGTGATTTTTAAATATATATATATATATATATATATATATATATATATATTTGCTTT chr4 - 94230402 42757829 42757828 42757897 51472506 51472505 51472574 69 TTTTTGAACTTCTTTCACTTTTCCTCATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTT ...:...::.::.x.x.:....xxx:....:.:..x:.......:.:.x.......:.......:.... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 64801088 NA +3112 chr4 + 190214555 107558933 107558932 107558993 61 ATTTTTAAATATATATATATATATATATATATATATATATATATATTTGCTTT--------GGCACTTG chr4 - 94230402 68967417 68967416 68967485 25262918 25262917 25262986 69 ATTTCTGACTATATATGTGTAAGTATATGTGTAAATATACATATATTTACTTTTTTCCAAAGGCACCTG ....:.:.x.......:.:..x:.....:.:..x.....:........:....--------.....:.. 53M8I8M 48/61 78.7% 69/94230402 0.0% 8/61 13.1% 38591516 NA +13530 chr4 + 190214555 107563493 107563492 107563877 385 TTGGTTCCATCTCCTGGGACCACCATCAGTAGGAATAGAATTAATCCTTGCTAATCAGCCAAGCATTGTATTGCCTTAAGCAGTACAGGTGGCCACA-TCTAGATGAAATGCAGAAATCACATATCCCTTC---------------------TATTCCTGTGTGTTCTTGCCTAGTAATCTGTAATTCTCCTGGCTATAAACTGTTCCTTCCTAGCAACAATATACCATAATTTCACTGGCCATTCTTATTCATTAATACCAGCTGCTTAGCAGTGCCTGAAGGTATCAGAAGAAATATGTGTAGATGGTTTTACCATATGGTTGTTAAAAGCTGATGAA----GTCCTTTCATGTAAAGCTGGTGTTGGCCAGACACCATATGCATGAAGCAAAGGCCAGCAATATGAAA chr4 - 94230402 54753802 54753801 54754194 39476209 39476208 39476601 393 TCGATTCCCTTCCTTATAACTTTTAGCAGAAGGAATTGAATTACTATTTTCTACTTAGTTTCATATTACGTTGCCTTGAGTAGTACAGGTGCCCAAAATACAAATTATACTTAGAGATCATCCATGTTTTCAGAGGTCACATGTTTTGGGGTTGCTCCTTTCTTCTTCCTTCAAGTAACCTACAAGATTCCTGGCTATAAATTGTTCCTTCC-AGCAACCACATGCCATGATTTTGCTGGCTATTTTTATTCATTAATACCAGCTGCTTCACAGTGCCTGGAAGTAACAGAAAAAATATGTATATATGTTTTAACCATATGG----TAAAATCTGATGAAGGATGGCCTTTTATGTAGG-------------ATAATTCATAAGCCTGCAGTAAAATTCAGTCTTATGCAA .:.:....x.::.:.:x:..:x::.x...x......x......x.x:..x...x.:..::xx::...:::.......:..:..........x...x.-.x:.:..x.x.:x:...:....:x:..x::...---------------------.::....x.x.x:.:::x:.x.....:..::..xx:.............:..........-......x.:..:....:....::.....:...:.......................x:.........:.:...x.....:........:..x...x...x.........----.....x........----.x.....:.....::-------------.x.xx:....x..x..x..:...:x:...:xx....x.. 97M1I33M21I60M1D109M4D14M4I15M13D39M 260/367 70.8% 393/94230402 0.0% 44/367 12.0% 52809691 NA +3102 chr4 + 190214555 107580108 107580107 107580161 54 TTAAAAGAAAAACAAACAAACAAAAGAAAGCAACAACAACAGCACCAACAAAAA chr4 - 94230402 3476555 3476554 3476608 90753795 90753794 90753848 54 TTTAATGAAATACATACACACAAAAACGAGCAAAAACAACAGCAACAACAAAAA ..x..x....x...x...x......:x:.....x..........x......... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 104103553 86111002 +19316 chr4 + 190214555 107613921 107613920 107614400 480 TAATGTGAATACTACTGGTTACAACTAATATAACAGCTTGAAAAAATCATGACACAGAAGCAT--AAATA-TAATATAAAAAGACAATTTTAAAATTGTATTGTAGGAATAT-AACTATAATAAGTGGAAAAGATACATTAAAACCATCAGTGTGTTA--CACTTGTTCAAAACAGAACTCATAAGG-CAGACCAAAACTGATGC-AAGTTAAGGAAAATG-GTCTGTTTTTAG-GAAGCATGTCCAGACAGACACCACAA---AGAAATGCCAACAGAGACTATGTGGTCCCCT-CTTGTTACTAG-TAATGTGTCAAAGGTGGAGTGACTGGGTTAACA----GCCTAAGCTTTCTCCAAGGATTTGTAGTATTCTGTCAGCACGGTCCAAGCCTTGGGAGCCATGAAACCTTCAGGTGGTTTCTGGCCTTCTCGAGCAAGTTTGCGCATTCGTGTTCCTGAAATAAATTCAAAGTCTTCATGGCTAAAGGAGAGGA chr4 - 94230402 54765825 54765824 54766312 39464091 39464090 39464578 488 TAATATGAAAAAAGCTG----CATCTATT-TAACAGCT-GCAGAACTCAGAGGACAGAGGCAGtaaaataataataaaaaaaaaaGAGTTAAAAAACCCACTGTAAGAATATTAACTGTAATAAAAGAAAAG---ACATTAAAAACAGCAGCTAGTTAGGTGCCAGGACATAATGGAACCCATAAGGACAGGCAAAGAATGATGCTAAGTTAGAGAGAAAGAGTCTGTTTTCAGAGAAGAACTTCCTGACAGACACCACAACAAAGCAACATGAACGGTGACTGTGTGGTCCCCTTCTCGTAAATAAATCAGGCGTCAAAGGTTGATCTGC--AGTTAATAAGAGGCCTAAGCCTTCTCCAAGGATTTGTAGTATTCTGTCAGCACAGTCCAAGCCTTAGGAGCCATGAAGCCTTCCGGTGGGTTTTGTCCTTCTCGAGCCAGCTTGCGCATGTGGGTCCCCGATATAAATTCAAAGTCTTCATGGCTGAGAGATGGGA ....:....x.xx:...----..x...x.-........-.x.:..x...x::x.....:...x--.....-.....x.....:.x:.x..x....x:x:.:....:......-....:......:x.:...:---.........x..x...:xx....--::.:x.xx..x..::....:.......-...:.x..:.x......-......::..:..x.-.........:..-....x.:x...x..............---..x..:::x...:.x....:...........-..:..x.x..:-.x.x.:.........x..x:x:.--:.....:.----........:................................:...........:...........:.....x.....x..:..x...........x..:........x:.x..:..:..x.......................:.::..x:... 17M4D8M1D8M1D24M2I5M1I41M1I19M3D23M2I27M1I17M1I15M1I12M1I26M3I31M1I11M1I23M2D8M4I154M 365/469 77.8% 488/94230402 0.0% 30/469 6.4% 52848096 NA +15501 chr4 + 190214555 107631625 107631624 107631873 249 ACTTACTGTTCAGAGTCATAGTAGTCCATACGCTTCTTTTTCTTGTTGTAAGCTGCAACTCGAAAGGGAACTATTTCCAAAGTGATTAAACCAGGGGCCATCGTCAGCACTTTGGCACCATGACTTGGCTCATAAAGATCCTTCCCTGTTTCTGGATGAGGCATGCCAGCAGGGTCTCGTCCAACAATGTAAAAGTTGGCTCCTGCAACCATCCGTGCTCTGCAATGCCACTGGACCTAGAATAAAAGT chr4 - 94230402 54772759 54772758 54773007 39457396 39457395 39457644 249 ACTTACTGCTCAGAGTCATAGTAGTCCATGGACTTCTTTTTCTTGTTATAAGCCGCAACCCTGAAAGGTACAATTTCCAGTGCTCGGAGGCCTGGGGCCATTGTCAACACTTTGGCACCATGGGTTGGTTCATACAGATCTTTCCCAGTACCAGGGTGCGGCATCCCTGCAGGATCTCGCCCCACAATGTAGAAGTTAGCACCTGCAACCATCCGTGATCTGCAGTGCCACTGAACCTAGAACACAGAT ........:....................:x:...............:.....:.....:.x:..:..x..x.......:x.:xxxx.::..x........:....:...............:x....:.....x.....:.....x..x:.x..:..x.....x..x.....:.....:..x........:.....:..x................x......:........:........:.x.::. 249M 199/249 79.9% 249/94230402 0.0% 0/249 0.0% 52858866 NA +6486 chr4 + 190214555 107640311 107640310 107640540 230 CATAAAATCTTTATAGACTATAAAATCAGGAACATCCTGTTGATAACCAAATAGGCTTAACAGCTGCCCATGGTTCTGAAAAGCATTTGTGCTAAGGAAACAAATCTGGTACCAATGCCTTCTAAATGACCTACAGAAAATGATTAAAGGAAGAGTCGTTGTTTTTATTTTATTATTATTAGTTGGCAAATAAGCATTACTGACAGACTTTTTCCTGATGTCACTGGAAA chr4 - 94230402 54774135 54774134 54774334 39456069 39456068 39456268 200 CATCAAAATCCTACAAATTGAAAGGTGATATCCATC-TATTGATAACCAT------------GCTGCTTGCATTCCTGTAAATAATGTGTGCTACAGAAATAAATCTGGTATCTATGCCTTTTAAATGACCTACAGAAAATGGTTAGAGGAAGAATC-----TCCTACTTCCTGGCT------------ACAGACATTATTGTCAGTTTGTATTCTGAAATTATTGGTAA ...x...x:::..:.:.:.:x..::.x.x:xx....-.:..........x------------.....:::::x.:...x...xx..x.......x:....:..........:.x.......:....................:...:.......:..-----.::..:..:x.x::.------------.:.::.....:..x...x:.x.x.:....x:.:.:...x.. 36M1D13M12D95M5D15M12D41M 138/200 69.0% 200/94230402 0.0% 30/200 15.0% 52866176 NA +19171 chr4 + 190214555 107644799 107644798 107645080 282 TACCTCAGTTGGTCCAGCATACATCATGGGAGATGGGAAGATGGCCACCACTGTCGTCTCAGGATTCAGAACTCCTTCCTCCAACACTGCAGCATGCTGCTTCATACGCCACATCAAAGGAACATCGTCATCCTTTGTCCAGCCACCCAGAGGGTGGAGGAGGAGGACAGGGCGCCGGTAGCCCCTCTCTAGAAGTTGCTTATGGGTATCCTGCATTAACAGGGCATGTCCATTGTGCACTGGGTTGCGTAGTTGAAATGCAAAGACAGCATCTGAAAAGAG chr4 - 94230402 54775334 54775333 54775615 39454788 39454787 39455069 282 TACCTCCGTTGGTCCAGCATACATCATGGGGGAGGGGAATATAGCCACTACCGTTGTTTCTGGATTCAAGACTCCCTCCTCCAGTACTGCAGCATGCTGTTTCATGCGCCACATGAGAGGAACGTCGTCCTCCTTTGTCCAGCCTCCAAGTGGATGCAAGAGCAAAACTGGACGCCTGTAGCCACGTTCCAAAAGCTGCTTATGAGTATCCTGCATTAAAAGTGCGTGCCCATTGTGCACTGGGTTGCGTAACTGGAATGCAAAGACAGCATCTAAGGAGAG ......x.......................:..x.....x..:.....:..:..:..:..x.......::.....:.......::..............:.....:........x.:......:.....x..............x..x..x..:..x.:...x.::..x..:....x......x.x:..:.:...:........:..............x..x..:..:......................::..:..................:.::.... 282M 232/282 82.3% 282/94230402 0.0% 0/282 0.0% 52869465 NA +3067 chr4 + 190214555 107646304 107646303 107646357 54 TATATATACACACACA----CACACACATACACACACATACACACATACACACACACA chr4 - 94230402 90815415 90815414 90815472 3414931 3414930 3414988 58 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA .:...:.......:..----::..........x......:........x:.....x.. 16M4I38M 44/54 81.5% 58/94230402 0.0% 4/54 7.4% 16830889 NA +9621 chr4 + 190214555 107653486 107653485 107653643 158 CTTACCAGCATTCATATCTTTAAATTTCTGCTTTAGCTCAGTAGGAGTAAGACGATACTGATCAAGACCATCATTCCAATAAACTCGATCCAAGACTTGAAGATCTCCTCCAATCAGCCAATCTCCTTGTTCCATCACCATCTAATAGGAAAAACAAA chr4 - 94230402 54777502 54777501 54777659 39452744 39452743 39452901 158 CTCACCAGCATTCATTTCCTTGAACTTCTGTCTTAGTTCAGCTGGAGTGAGACGGTACTGATCAAGTCCATCATTCCAATAAATACGATCAAGGACCTGTAAATCTCCACCTACAAGCCAGTTCCCTTGCTCCATAACCATCTAGGAGAAATAACGAA ..:............x..:..:..:.....::....:....:x.....:.....:...........x................:x.....x.:...:..x.:......x..x.:x.....:.::.....:.....x........:x..:..x...:.. 158M 124/158 78.5% 158/94230402 0.0% 0/158 0.0% 52875984 NA +14539 chr4 + 190214555 107654693 107654692 107654921 229 ACCTTAATATAGGGGTGGTTCTTGCATGTCGTTCCCCACTGTCTGGCACAGCGCTCCTCTTTCCTGTGCTCAAAAAACTCTGGATTGCGAAGAATGGCCACACGGCGGCCCTCATACATCAGAGCAAATGCTGTACAGCCGTCCAGCCTCTCTTTATCTTCATGAGTCGCAGTCAGAACTATAGGTACTGACAAGTTAATGACACCTCCTGCAGAGCACAAAAGAACAT chr4 - 94230402 54779158 54779157 54779386 39451017 39451016 39451245 229 ACCTTTATGTAAGGATGATCCTTGCATGTTGTTCCCCACTGCCTCGCACAGCGTTCCTCTTTCCTATGCTCATAGAATTCTGGATTACGGAGAATGGCCACACGGCGACCCTCGTACACTAATGCAATTGCTGTACAACCATCCAGTCTTTCCTTGTCTTCCTGTGTAGCTGTTAGCACTATAGGCACTGAAAGATTAATGACTCCCCCTACAGAGTGAAAAAAGCCAT .....x..:..:..:..:.:.........:...........:..x........:...........:......x.:..:........:..:.................:.....:....::.:x....x.........:..:.....:..:..:..:.....x..x..x..x..:..x........:.....x.::........x..:...:.....::x....::x... 229M 181/229 79.0% 229/94230402 0.0% 0/229 0.0% 52875535 NA +9760 chr4 + 190214555 107656885 107656884 107657015 131 AAATGTCTTACCATCCAGAAGACAATCAAAATGAAGGCACTGCAAGTACTCCCTCTCTCTCATAAAGCCATTCAATGGGGTTGCCCAACCTTCTGCCAAAACCTGCACCCACTGCATATCCACCTAGTAAA chr4 - 94230402 54781189 54781188 54781319 39449084 39449083 39449214 131 AAGTATTTTACCATCAAGGAGACAGTCAAAGTGAAGGCACTGCAGGTATTCTCTCTCTCTCATAAAGCCACTCAGAGGTGTTGCCCAGCCTTCTGCCAACACTTGCACCCACTGCATATCCACCTTGTAAA ..:.:.:........x..:.....:.....:.............:...:..:..................:...:x..x........:...........x..:......................x..... 131M 113/131 86.3% 131/94230402 0.0% 0/131 0.0% 52875696 NA +6842 chr4 + 190214555 107659956 107659955 107660106 151 TACTTTATTAATTTTCAGTGCTGGTAATGTTTCCGCATCTGTTTTTGCCAAATGAAGTTTATTTTCTGGCACATATAGTTCTTTTACTTCATAAGATGCATCCACAGGTACAATATCCTATATAACAACAGGAGT----ACAATTTAAATGTTTG chr4 - 94230402 54782596 54782595 54782748 39447655 39447654 39447807 153 TACCTTATTTATTTCCAAGGTTAACAGAGACTCAGCATCAGTTTTAGCCAACTTCAGTTTGTTTTCTGGCACATAAAGCTCTTTCACCTCATACGAGGCATCTACTGGTACGATGTCCTGTAT-ATAAAAGGAATAATCACAATTT-TATGTTTG ...:.....x....:..:x.:.:::.:x.x:..x.....x.....x.....x.xx.....:..............x..:.....:..:.....x..x.....:..x.....:..:....:...-.:..x....:.----.......-x....... 123M1D11M4I7M1D8M 114/149 76.5% 153/94230402 0.0% 6/149 4.0% 52877360 NA +9122 chr4 + 190214555 107682010 107682009 107682141 132 CTTACCCGTTCCTGTAGAAGTTCCACAACTTGCTGGACACAGTCATTTACATCACAGGAGTCTGTTTTCAGCACCAACTCAGGGGCCTCTGGCTTTTCATATTCAGAATCGATCCCAGTGAAACCTGCAAAA chr4 - 94230402 54789506 54789505 54789637 39440766 39440765 39440897 132 CTCACCCTCTCTTGAAGAAGTTCCACAACTTGTTGTACACAATCGTTCACATCACAGGAATCAGTTTTCAGCACAAGCTCTGGGGCTTCTGGTTTTTCATACTCAGAGTCAATCCCAGTAAAGCCTACAAAA ..:....x:..:..x.................:..x.....:..:..:...........:..x...........x.:...x.....:.....:........:.....:..:........:..:...:..... 132M 109/132 82.6% 132/94230402 0.0% 0/132 0.0% 52892504 NA +10830 chr4 + 190214555 107687020 107687019 107687210 191 GGAAGAAAATATTACTG-----ACCTTTAATTTCTCCTGCCCGGGCTTTTTTGTAGAGTCCTTTGACATCCCTCTGTTCACAAACATGCAGAGGAGCATCAACAAATACTTCAAAAAACGGTAAACTTGCACCTTCATGAATTTGCCTTGCATTGTTGCGATCCTTAAAAAA------AAATAAAATAAAAAGTGATCACAC chr4 - 94230402 54791302 54791301 54791503 39438900 39438899 39439101 202 GGATGAAACTATATCTAGGTTCACCTTTAATTTCTCCAGCTCTGGCTTTCTTATACAGTCCCTTAACATCTCTTTGTTCACAGACATGCAAAGGAGCATCCACAAATACTTCAAAAAAAGGCAAGCTGGCCCCTTCATGAATTCGTCTAGCATTATTACGATCCTGAAAGAAAACAGGAAAAGAAATACAAAAAGATTGCAC ...x....x...xx..:-----...............x..:.x......:..:..x.....:..:.....:..:........:.......:.........x.................x..:..:..x..x............:.:..x.....:..:.......x...:..------...x:.....x...:x...::... 17M5I150M6I24M 154/191 80.6% 202/94230402 0.0% 11/191 5.8% 52895718 NA +16666 chr4 + 190214555 107693764 107693763 107694013 250 CACATACCTGAGTGTAAGGTGATATGAAACTTGTGATGCACACTAAGCCAGCATCTGCAAACAGTTTAGCAACTTCTGCGATGCGTCGAACATTCTCTTCTCTGTCTTCAGGACTAAAGCCAAGATTTTTATTGAGACCTTGACGAATATTGTCACCATCCAGAGTGTAGCATGGAATACCATGACAAACCAGGTACTCCTCCAAGGCCATGCTCACAGTAGTCTTTCCCGCTCCAGACAAGCCTAAAAT chr4 - 94230402 54792811 54792810 54793060 39437343 39437342 39437592 250 CATTTACCTGAGCATAAGGAGAGATGAAACTAGTGATGCACACCAAACCAGCATCTGCAAACAGTTTAGCAACCTCAGCAATCCGACGGACGTTTTCTTCTCTATCTTCTGGAGTGAAACCCAGATTCTTATTAAGGCCTTGGCGAATATTGTCACCATCCAACGTGTAGCATGGAATGCCATGGCATACTAAATACTCCTCCAGGGCCATGCTAACTGTGGTCTTCCCAGCACCAGATAGACCTAAAAT ..:x........::.....x..x........x...........:..:..........................:..x..:..x..x..:..:..:........:.....x...x.:..:..x.....:.....:..:.....:...................:x..............:.....:..x..:.::..........:.........x..x..:.....:..x..x.....:.::........ 250M 205/250 82.0% 250/94230402 0.0% 0/250 0.0% 52900953 NA +9549 chr4 + 190214555 107701157 107701156 107701401 245 TCTCTTGACCATACCTGTTAGCCAAACTGTGCAACCACGAAAGCCACCTCTGGTCCCCACCACCTGACCTCTCTTGTTCCTGCTGACATGATGGGCTTGGTAGGTGACATTGGTTGCTCTCTGCATTCCCTAGAAAAAAAAGAAAAAAAAAATTCTAGTTTACATGAGTCCTTTAAAAGGCAAAC-------ACATATTCCTT-------GCAAACACACA-AAAGTCTATGTAACATGCCAAAAGCAAAGAAAAAGATA chr4 - 94230402 54794141 54794140 54794400 39436003 39436002 39436262 260 TTCCATAAACGTACCTGTTAACCAGACTGTGCATCCACGGAAACCACTTCTTGTTCCTACCACTTGGCCTCTCTTATTTCGGCTGACATGATGAGCTTGGTAGGTAACATTGGTTGCCCTCTGCATTCCCTGTAGAAATAATAGTTGATTAGATCTTCTAAAATTGAACTTCTAAAAGGGTAAGCTGGCACAGCATATTAATTCTTATTCACAGGCACAAAGAAAGACTTAGAGACCTGCCAGTGGAAGTAAAAACAATA .::.x.:.x.:.........:...:........x.....:..:....:...x..:..:.....:..:........:..:.x............:...........:...........:.............:x.:...x..x.:xx:.xx.:x...xx.xx.xx...:::::.x...:..:..:.-------:......xx..-------:..::....x.-....x..xx.x:..x.....:x:.x.:x:....x:... 185M7I11M7I11M1I38M 172/245 70.2% 260/94230402 0.0% 15/245 6.1% 52907016 NA +5110 chr4 + 190214555 107720079 107720078 107720187 109 CCCCTCCGCTCCTCGCCGTCTCGCCTTCGTCCCCAGCTTACCCAGTTCTGCGCGTTATTGCTCAGTTTGACTTTCTTGCACAGGCTCCCGGGGATCTCCATGACCGCGG chr4 - 94230402 54801122 54801121 54801230 39429173 39429172 39429281 109 CCTCcccactcctccgcacgcccacctgcccgcccgctcacccAGTTCGGCACCCTGTTGCTCAGCTTCGCTTTCTTGCACTGGCTCTCAGGCAGCTCCATGGCCGCGG ..:.:..:......xx.::x:.xx.:.xx:.x..x...:.........x..:.x:.:........:..x:...........x.....:.:..x.x.......:...... 109M 77/109 70.6% 109/94230402 0.0% 0/109 0.0% 52918957 NA +3151 chr4 + 190214555 107726979 107726978 107727066 88 AGAGGGTATATATATATACATATATATATATACATATATATATATACAATATATGTATATACATATATATATACACATATATATATAC chr4 - 94230402 80748426 80748425 80748513 13481890 13481889 13481977 88 AGAGGTCTTATATAACTACATTATTCTCTATCCACGTGTCTATATATACTAAACATTTATAAGTGCATATGTACACGGACATATATAC .....x:x......xx.....xxx.x.x...x..::.:.x......:.x..x.::.x....x:.::....:.....:x.:........ 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 26978553 NA +3416 chr4 + 190214555 107727046 107727045 107727147 102 TATATACACATATATATATACACATATATATGACTGTGTATATATATATAAAACTGTGTGTATATATATGTGTGTATATATATACACACACACACATACACA chr4 - 94230402 73121102 73121101 73121203 21109200 21109199 21109301 102 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACA .:.::.::.....x:...:...:...:.:.x:.x::..x:..:...::..x.:x.::::.x:.....:..x..::.....x....:.x....x.x.:..... 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% 34605944 NA +3428 chr4 + 190214555 107879519 107879518 107879611 93 TGGCACCATCTCATCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCTTCCCGAGTACCTGGGATTACAGGCACACC chr4 - 94230402 18197114 18197113 18197200 76033203 76033202 76033289 87 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC .....:...x.:------..:..:..:xx:x..:.::..........x...x..x.x......:.::.:....x....:.:....x.::.... 12M6D75M 60/87 69.0% 87/94230402 0.0% 6/87 6.9% 89682405 NA +4214 chr4 + 190214555 107886275 107886274 107886351 77 CTGCAGCCTCAACCTCTTGGGCTCAAGTAATCCTCTAACCTTAGCCTCCCAAGTAGCTGGGACTACAGGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.....:x..x..::....:......:x.:.x.x::x..:.....::...........:......x......... 77M 57/77 74.0% 77/94230402 0.0% 0/77 0.0% 89689149 NA +26409 chr4 + 190214555 107895531 107895530 107896015 485 TTTGATCTGAAGACTAGGGGACAATGGATATCATAGAGACAGCAAAACTTGAAGAACATTTGGAAAATCAACCCAGTGATCCTACGAACACTTATGCAAGACCCGCTGAACCTGTTGAAGAAGAAAACAAAAATGGCAATGGTAAACCCAAGAGCTTATCCAGTGGGCTGCGAAAAGGCACCAAAAAGTACCCGGACTATATCCAAATTGCTATGCCCACTGAATCAAGGAACAAATTTCCACTAGAGTGGTGGAAAACGGGCATTGCCTTCATATATGCAGTTTTCAACCTCGTCTTGACAACCGTCATGATCACAGTTGTACATGAGAGGGTCCCTCCCAAGGAGCTTAGCCCTCCACTCCCAGACAAGTTTTTTGATTACATTGATAGGGTGAAATGGGCATTTTCTGTATCAGAAATAAATGGGATTATATTAGTTGGATTATGGATCACCCAGTGGCTGTTTCTGAGATACAAGTAAGTA chr4 - 94230402 54894417 54894416 54894898 39335505 39335504 39335986 482 TTTAACCCTACAGCTTGGG---AATGAATACTATTGAGACCGCAAAACTTGAAGACCATATGGAGGGTCAAAACAATGACACTGCTAATGGATACACACGACCTACTCTCTCAGTCAGTGAGGAGAACAAAAATGGCAATAACAAACCGAAGGGCTTGTCCAATGGCTTGCGGAAAACGGCGAAGAAATATCCTGATTACATCCAGATTGCTATGCCTGCTGAATCTAGGAACAAATTTCCTCTGGAATGGTGGAAAACAGGCATTGCCTTTGTCTATGCTCTCTTCAACTTGATTTTAACAACTGTCATGATCACTGTGGTCCATGAGAGAGTACCTCCAAAAGAGCGTAGCCCTCCCTTGCCTGACAAATTTTTTGATTATATTGATCGTGTGACATGGGCTTTTTCTGTATCAGAAATAAATGGAATGATACTAGTTGGATTGTGGATATTCCAGTGGTTATTTCTTAGATATAAGTAAGTA ...:.:.:x.x::..x...---....:...::..x.....x..............x...x....:::....xx..:...:x..:.x..::xx..::..x....::..xxx:.x..:::x..:..:...............:::.....x...:....:....:...x:....:...:xx:.x..:..:..:..x..:..:.....:...........::.......x..............x..:..:...........:...........::.x.....xx.:......:.x:.:..:.....:...........x..x..x........:..x.....x..:....x.........x:.x..x.....:...........:......x.x....x......x.......................:..x...:..........:.....xx:.......:.:.....x.....:......... 19M3D463M 367/482 76.1% 482/94230402 0.0% 3/482 0.6% 53001114 NA +16813 chr4 + 190214555 107895758 107895757 107896015 258 AGGAACAAATTTCCACTAGAGTGGTGGAAAACGGGCATTGCCTTCATATATGCAGTTTTCAACCTCGTCTTGACAACCGTCATGATCACAGTTGTACATGAGAGGGTCCCTCCCAAGGAGCTTAGCCCTCCACTCCCAGACAAGTTTTTTGATTACATTGATAGGGTGAAATGGGCATTTTCTGTATCAGAAATAAATGGGATTATATTAGTTGGATTATGGATCACCCAGTGGCTGTTTCTGAGATACAAGTAAGTA chr4 - 94230402 54880678 54880677 54880935 39349468 39349467 39349725 258 AGGAACAAATTTCCTCTGGAATGGTGGAAAACAGGCATTGCCTTTGTCTATGCTCTCTTCAACTTGATTTTAACAACTGTCATGATCACTGTGGTCCATGAGAGAGTACCTCCAAAAGAGCGTAGCCCTCCCTTGCCTGACAAATTTTTTGATTATATTGATCGTGTGACATGGGCTTTTTCTGTATCAGAAATAAATGGAATGATACTAGTTGGATTGTGGATATTCCAGTGGTTATTTCTTAGATATAAGTAAGTA ..............x..:..:...........:...........::.x.....xx.:......:.x:.:..:.....:...........x..x..x........:..x.....x..:....x.........x:.x..x.....:...........:......x.x....x......x.......................:..x...:..........:.....xx:.......:.:.....x.....:......... 258M 213/258 82.6% 258/94230402 0.0% 0/258 0.0% 53015080 NA +9799 chr4 + 190214555 107899546 107899545 107899702 157 TTTTTCCCCATCCCTATTTTTTCTTTTAGGTCAATAGTGGGACGCAGATTCTGTTTTATTATTGGAACTTTATACCTGTATCGCTGCATTACAATGTATGTTACTACTCTACCTGTGCCTGGAATGCATTTCCAGTGTGCTCCAAAGGTCAGTACCT chr4 - 94230402 54895463 54895462 54895610 39334793 39334792 39334940 148 TTTTTCCCCATCACT---------TTCAGATCAATTGTGGGACGCAGGTTTTTTTTTATAATAGGAACTTTGTACCTGTACCGCTGCATTACTATGTATGTTACCACCTTACCTGTGCCCGGAATGCATTTTCAGTGTGCACCAAAGGTAGGAGCCT ............x..---------..:..:.....x...........:..:.x......x..x........:........:...........x...........:..::..........:...........:........x........x:.x:... 15M9D133M 126/148 85.1% 148/94230402 0.0% 9/148 6.1% 53004083 NA +9799 chr4 + 190214555 107899546 107899545 107899702 157 TTTTTCCCCATCCCTATTTTTTCTTTTAGGTCAATAGTGGGACGCAGATTCTGTTTTATTATTGGAACTTTATACCTGTATCGCTGCATTACAATGTATGTTACTACTCTACCTGTGCCTGGAATGCATTTCCAGTGTGCTCCAAAGGTCAGTACCT chr4 - 94230402 54881523 54881522 54881670 39348733 39348732 39348880 148 TTTTTCCCCATCACT---------TTCAGATCAATTGTGGGACGCAGGTTTTTTTTTATAATAGGAACTTTGTACCTGTACCGCTGCATTACTATGTATGTTACCACCTTACCTGTGCCCGGAATGCATTTTCAGTGTGCACCAAAGGTAGGAGCCT ............x..---------..:..:.....x...........:..:.x......x..x........:........:...........x...........:..::..........:...........:........x........x:.x:... 15M9D133M 126/148 85.1% 148/94230402 0.0% 9/148 6.1% 53018023 NA +11337 chr4 + 190214555 107903163 107903162 107903403 241 CACACAATTAGACTGAAACATGATTTTAGCCACTTG----------TAAATTCCCTTCTTAATCTTCTTGTG-TCATTCAGCTCAATGGAGACTCTCAGGCAAAAGTTCAACGGATTCTACGATTGATTTCTGGTGGTGGATTGTCCATAACTGGATCACATATCTTATGTGGAGACTTCCTCTTCAGCGGTCACACGGTTACGCTGACACTGACTTATTTGTTCATCAAAGAATGTAAGTAATAGCCCATT chr4 - 94230402 54882388 54882387 54882638 39347765 39347764 39348015 251 CATATTGTTGGGGAGGAAGTTGATTTAAGTTACTTACTGTGTATCATAACTTTTCTT-GTATTCTTTTTCTGGTGGTCTAGTTGAATGGAGATTCTCAAGCAAAGGTGCAGAGGATCTTGCGACTGATATCTGGTGGTGGCCTGTCCATAACTGGATCTCACATCTTGTGTGGAGACTTCCTGTTCAGTGGTCACACTGTAGTACTAACACTGATCTACCTGTTCATCAAAGAGTGTAAGTTATGGTATATT ..:.:x:..:.:xx.:..xx......x..::....:----------...x..::...-x..x....:..x..-.x:.::..:.x........:.....:.....:..x..:x....::.:...:....x...........x:................x..:.....:..............x.....:........x..x:::..:.......::..::.............:.......x..:.:x:... 36M10I11M1D14M1I179M 178/240 74.2% 251/94230402 0.0% 12/240 5.0% 53020775 NA +11296 chr4 + 190214555 107903183 107903182 107903403 221 TGATTTTAGCCACTTG----------TAAATTCCCTTCTTAATCTTCTTGTG-TCATTCAGCTCAATGGAGACTCTCAGGCAAAAGTTCAACGGATTCTACGATTGATTTCTGGTGGTGGATTGTCCATAACTGGATCACATATCTTATGTGGAGACTTCCTCTTCAGCGGTCACACGGTTACGCTGACACTGACTTATTTGTTCATCAAAGAATGTAAGTAATAGCCCATT chr4 - 94230402 54896351 54896350 54896581 39333822 39333821 39334052 231 TGATTTAAGTTACTTACTGTGTATCATAACTTTTCTT-GTATTCTTTTTCTGGTGGTCTAGTTGAATGGAGATTCTCAAGCAAAGGTGCAGAGGATCTTGCGACTGATATCTGGTGGTGGCCTGTCCATAACTGGATCTCACATCTTGTGTGGAGACTTCCTGTTCAGTGGTCACACTGTAGTACTAACACTGATCTACCTGTTCATCAAAGAGTGTAAGTTATGGTATATT ......x..::....:----------...x..::...-x..x....:..x..-.x:.::..:.x........:.....:.....:..x..:x....::.:...:....x...........x:................x..:.....:..............x.....:........x..x:::..:.......::..::.............:.......x..:.:x:... 16M10I11M1D14M1I179M 169/220 76.8% 231/94230402 0.0% 12/220 5.5% 53006832 NA +12899 chr4 + 190214555 107908562 107908561 107908755 194 CAGATTCGCCTCGTCACTTCTGGTGGTATCATTTAATCTGCTGGCTGCTGAGTGCTGCCGGGATCATCTGCATTCTTGTAGCACACGAACACTACACTATCGATGTGATCATTGCTTATTATATCACAACACGACTGTTTTGGTGGTACCATTCAATGGCCAATGAAAAGGTGAGAGCAGTGAAGATGCTTGGA chr4 - 94230402 54899054 54899053 54899245 39331158 39331157 39331349 192 CAGATTCACCACGTCATTTCTGGTGGTATCACTTAATCTGCTGGCTGATGAGTGCTGCTGGCATAATTTGTATCCTTGTTGCTCATGAACATTACACTGTAGATGTCATCATTGCTTACTATATCACTACACGACTCTTCTGGTGGTACCACTCAATGGCTAATGAAAAGGTGAGTG--GCAAATATGTTTAGA .......:..x.....:..............:...............x..........:..x..x..:..:..:.....x..x..:.....:......:.x.....x...........:........x........x..:...........:........:..............x.--.::..x...:..:.. 177M2D15M 162/192 84.4% 192/94230402 0.0% 2/192 1.0% 53009508 NA +12899 chr4 + 190214555 107908562 107908561 107908755 194 CAGATTCGCCTCGTCACTTCTGGTGGTATCATTTAATCTGCTGGCTGCTGAGTGCTGCCGGGATCATCTGCATTCTTGTAGCACACGAACACTACACTATCGATGTGATCATTGCTTATTATATCACAACACGACTGTTTTGGTGGTACCATTCAATGGCCAATGAAAAGGTGAGAGCAGTGAAGATGCTTGGA chr4 - 94230402 54885108 54885107 54885299 39345104 39345103 39345295 192 CAGATTCACCACGTCATTTCTGGTGGTATCACTTAATCTGCTGGCTGATGAGTGCTGCTGGCATAATTTGTATCCTTGTTGCTCATGAACATTACACTGTAGATGTCATCATTGCTTACTATATCACTACACGACTCTTCTGGTGGTACCACTCAATGGCTAATGAAAAGGTGAGTG--GCAAATATGTTTAGA .......:..x.....:..............:...............x..........:..x..x..:..:..:.....x..x..:.....:......:.x.....x...........:........x........x..:...........:........:..............x.--.::..x...:..:.. 177M2D15M 162/192 84.4% 192/94230402 0.0% 2/192 1.0% 53023454 NA +18098 chr4 + 190214555 107910329 107910328 107910710 382 ATTTTTTTCTACCATTTACAGAACTTGAAGGTCTCTTCACAGACTAATTTCTTATCTCGAGCATGGTGGTTCCCCATCTTTTATTTTTTTGAGAAAAATGTACAAGGCTCAATTCCTTGCTGCTTCTCCTGGCCGCTGTCTTGGCCTCCTGGCTGCTTCAAATCATCATGCAAAAAGTATTCACGGGTTCAGAAGATTGGTGAAGACAATGAGAAATCGACCTGAGGAGCAAAACAAAGGCATCAGCTC------TTACACCAAAAGAGTTAACGCTGTAACCAAAGGTATAGTTTTGTTTTTTATTTTAGGAGAACTGACTGGTAAATGAAGAAATGGACCAAAT-TTTGTGTAAACGATTAGAAAGA-----TGAACAAA-GTATTGCCCTTT chr4 - 94230402 54886055 54886054 54886422 39343981 39343980 39344348 368 ACCTTCTTCTGCC-CATACAGACTCTAAAGGTTTCTTCGCAGACAAATTTTCTCTCTCGAGCTTGGTGGTATCCAATATTTTATTTCTTTGAGAAGAACGTGCAAGGATCTGTTCCTTGCAGCTTCTCCTGGCCAATATCTTGGCCTCCCAGCTGCTTCAAATCGTCATGCAAAAAGTATTCACGGGTTCAGAAAACGGGAGAAGACAATGAAAAATCTACCTGAAG--------AAAAGCATCTGCTCTGTTTTTTTTACCAAAATA-TTAATGCTGTAACCAAAGT-----------------TCTTAAGAGGACTATATTGTAACTGAAGAAGTGGACCAAACGTCTGTGCAATTGATTGGAAATAAATTGTAGACAAGTATATTGCCATTT .::..:....:..-:x......x::.:.....:.....:.....x.....::.x........x.......x:..x..x........:........:..:..:.....x..x:........x.............:x.:...........::.............:.............................:.:x..x...........:.....x......:.--------...:.....x....------..x:.......x.-....:.............x-----------------.:...:...:...:xx.x....x.......:.........:-.:....:..x:....:....x.-----.::....:-:.......x... 13M1D213M8D14M6I13M1D19M17D41M1I22M5I8M1I12M 285/355 80.3% 368/94230402 0.0% 40/355 11.3% 53024274 NA +18287 chr4 + 190214555 107910345 107910344 107911182 838 TACAGAACTTGAAGGTCTCTTCACAGACTAATTTCTTATCTCGAGCATGGTGGTTCCCCATCTTTTATTTTTTTGAGAAAAATGTACAAGGCTCAATTCCTTGCTGCTTCTCCTGGCCGCTGTCTTGGCCTCCTGGCTGCTTCAAATCATCATGCAAAAAGTATTCACGGGTTCAGAAGATTGGTGAAGACAATGAGAAATCGACCTGAGGAGCAAAACAAAGGCATCAGCTC------TTACACCAAAAGAGTTAACGCTGTAACCAAAGGTATAGTTTTGTTTTTTATTTTAGGAGAACTGACTGGTAAATGAAGAAATGGACCAAAT-TTTGTGTAAACGATTAGAAAGA-----TGAACAAA-GTATTGCCCTTTGACTGGTTTTCTTCTTCATC--------------------CTGAGAAAGATACATT-CTCTTGCAGCTCTTCATTCATTGGTGACAAGCCCCCACCCCGGGACTTTACTAATGAGCTTGTTAAAGAGGTGCCAAAGAACATATTCCTCCTTTC-------TTTATTCTTTCTCCA---------CCAAAACCCTCTACTTCAGAATTTTTTCAGGATATTTTTCAGCCCAAGGTCAGAAGAATGTGTTAATATTTTAAATAAAATATCTGGACATCTACAGCCACTGTGTAAATAGAACTGCCTAATGTTGAGAGTGGTTTTTAGCATTAGGTT---TAGCAAGGGGGAGATCCGTGGGTTGTGCGT-CAGCTTTGGGTGAATTTTG-----TTTCTACCCTGTCACGGGGAAAGTTCGGGTTGAGTCCAGGAGTGCA--CACTGCTGCTGCCACCCA-ATGCGCTAC---ATATCACTTTTTTTTGTTTTGTT-TTGTTTTGTTTTTAAAAGATCATTTTATCT chr4 - 94230402 54900014 54900013 54900855 39329548 39329547 39330389 842 TACAGACTCTAAAGGTTTCTTCGCAGACAAATTTTCTCTCTCGAGCTTGGTGGTATCCAATATTTTATTTCTTTGAGAAGAACGTGCAAGGATCTGTTCCTTGCAGCTTCTCCTGGCCAATATCTTGGCCTCCCAGCTGCTTCAAATCGTCATGCAAAAAGTATTCACGGGTTCAGAAAACGGGAGAAGACAATGAAAAATCTACCTGAAG--------AAAAGCATCTGCTCTGTTTTTTTTACCAAAATA-TTAATGCTGTAACCAAAGT-----------------TCTTAAGAGGACTATATTGTAACTGAAGAAGTGGACCAAACGTCTGTGCAATTGATTGGAAATAAATTGTAGACAAGTATATTGCCATTTCATAATACTTTCCTGTGATCACGCAGTGCAGCGTGATGTGCTGATAGA-ATGCACCGCTGATGGGATTTTTTCCTTAAAGAAAATGGAGCAGGACTTTG---CTTTACTAATGAGAT------AGAGGTGCCAAAGACCTTATTAACACTTTCACTGCTAACTATCGCTCATCCACAGAAGCACCCAAAAATCTCATCCTCAGAGTTCT----GG---------AGTGAAAGGGCCAAAACATGCTAAAATA-TAGAAGCATGATATCCATGTATTGA-----AGTATACAAAAAACACAGT----TATGGGAAGTGGTTTGTTGCATTATCTTTGCTAATGAAGGGAAGACCTTTGTGTGACTAGCACAGCTGGAAGCAAGTGTTGACTTTTTTACATTCTGT---GGGTATAACTATCTTATGACCCTAAAATACAGCTACCACTGTTATCTTCCATATATCCTACGATGTACCAATTTTTACATTTTTATTAGTGTTTTATATTTAAACTGTTGTGCTACCT ......x::.:.....:.....:.....x.....::.x........x.......x:..x..x........:........:..:..:.....x..x:........x.............:x.:...........::.............:.............................:.:x..x...........:.....x......:.--------...:.....x....------..x:.......x.-....:.............x-----------------.:...:...:...:xx.x....x.......:.........:-.:....:..x:....:....x.-----.::....:-:.......x...x.:x:xx:..::::x.x...--------------------....x.:.-..:..::-..xx..x:::.:..:x:.:.xx.:x:.::::x.xxx..:::.---.............x.------..............x.x....xx:x.....-------x:...:x:.:x....---------......x:...xx.:.....:..:.----..---------..:xx....x.x:..:x...:xxx....-.xx..::.x:.....::x::..:x.-----.x.:.::...x.:x..x.:----.:.x.::........x.x......xx..---..:::.:...:...:.:x..x..x::xx.:-.....xx::.::.:.x...-----...x:.::....---...x.x.::.xxxx.xx:::..x::.:.:..--:..::...:.::.x:...-..::x....---:..:..x.....x:xx....:..-x......:.x......xx:.::.x:..:.. 211M8D14M6I13M1D19M17D41M1I22M5I8M1I32M20I8M1D7M1I42M3D15M6D30M7I15M9I25M4D2M9D28M1D25M5D19M4D28M3I30M1I19M5I12M3D31M2I18M1I9M3I23M1I30M 529/776 68.2% 842/94230402 0.0% 128/776 16.5% 53010331 NA +3488 chr4 + 190214555 107920976 107920975 107921033 58 TGGGGTGGGGCAGGTGGGATTGCTGTTTTTGTTGTTATTGTTTTTGTTTGTTTGTTTT chr4 - 94230402 4919460 4919459 4919517 89310886 89310885 89310943 58 TGGGGTGGTGTGGTGGTGGTAGGTTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTT ........x.::.xx.x.:.x.x.x...........:..................... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 103001516 87213039 +8562 chr4 + 190214555 107947346 107947345 107947542 197 CTTCTGGTTTATTTTTCCCTT------TTTACATAGAAAAGGTTCATGAAGAAATTGAAAGAGTCATTGGCGCCAACCGAGCTCCTTCCCTCACAGACAAGGCCCAGATGCCCTACACAGAAGCCACCATCATGGAAGTGCAGAGGCTAACTGTGGTGGTGCCGCTTGCCATTCCTCATATGACCTCAGAGAACACAGGCAAG chr4 - 94230402 54911161 54911160 54911363 39319040 39319039 39319242 203 CTTCTTTTTTTTTTTTTCATCACTGTCTTTGAATAGAGAAAGTTCATGCAGAAATTGAAGCAGTTCTAGGACGTGACAAAGTTCCCTCTCTTGCCCACAAGGCTCAAATGCCCTTCACGGAGGCAACCATTATGGAAGTGCAGAGGATGACTGCAGTTGTTCCCCTTTCTATCCCACGAATGGCTTCAGAAACTGCTGGTAAG .....xx...x.....:.x.:------...:x.....:..:.......x..........:x...:x.x..xxx::..x:..:...:..:..::.xx.......:..:.......x...:..:..x.....:...............x.:....::..x..x..x...x.:..:..x.:x...:.:.....:.x::.x..:... 21M6I176M 139/197 70.6% 203/94230402 0.0% 6/197 3.0% 53036185 NA +10193 chr4 + 190214555 107949334 107949333 107949592 259 TTTCCTTTTGTTTTAGTGCTCCAAGGGTATACCATTCCTAAAGGCACATTGATCTTACCCAACCTGTGGTCAGTACATAGAGACCCAGCCATTTGGGAGAAACCGGAGGATTTCTACCCTAATCGATTTCTGGATGACCAAGGACAACTAATTAAAAAAGAAACCTTTATTCCTTTTGGGATAGGTCAGTT------ACACTTTTTTA----------------AACTGCATAATTTTTAAAAGAAGT---AGAACTAAAATAATATTTTATTATTTCATGTTG chr4 - 94230402 54912369 54912368 54912645 39317758 39317757 39318034 277 TTTGTCTTTTTTAAAGTGCTGCAGGGATATACTATTCCAAAGGGCAGTGTGATTGTGCCCAACTTGTGGTCGGTACACAGAGATCCTAATATTTGGGAGAACCCAGATGACTTCCAACCAACAAGATTTCTGGATGAAAATGGCCAGATAATTAAGAAAGAGGCATTCATTCCTTTTGGAATGGGTAAGATACCCACACACTGTTTTAGCAAGTGTAGGGCCTCAGAGGCATGACGTTTAAAAGGACTCACAGGACT-------TGTTTTATTATTGCATTTTG ...x::...x..xx......x..:..:.....:.....x..:....xxx....:x.:......:.......:.....:.....:..x:x:...........x..:..x..:...:.x..x.xxx.............xx.x..x..:x.......:.....::.x..:...........:..:...x..x.------.....x.....----------------.:xx....:.:x........:.x.---..:...-------.:..........x...x... 191M6I11M16I24M3I6M7D20M 188/252 74.6% 277/94230402 0.0% 32/252 12.7% 53036965 NA +9549 chr4 + 190214555 107950137 107950136 107950459 323 TCTGCATTTAGAATACTC-AATTTAGATATTTCATATAAATTTGTACTTTTTGAAATAGGAGAAGGGATGGTATTATAATCCTTCA-----TTTTTTTCTGATCTCATTTTTAGGGAAGCGGGTGTGTATGGGAGAACAACTGGCAAAGATGGAATTATTCCTAATGTTTGTGAGCCTAATGCAGAGTTTCGCATTTGCTTTACCTGAGGATTCTAAGAAGCCCCTCCTGACTGGAAGATTTGGTCTAACTTTAGCCCCACATCCATTTAATATAACTATTTCAAGGAGATGAAGAGCATCTCCAAGAAGAGATGGTAAAAAGATATAT chr4 - 94230402 54912845 54912844 54913158 39317245 39317244 39317558 314 TCTGCATTTGGAATACACTGGCATAGGAATTGCATGTGTGTT------------AACAAATGGATCAACAGTATAAAAAAACACTAATATGTCTCTTTCTAAT-TATTCTTTAGGTAAACGTGTGTGCATGGGAGAGCAGTTGGCAAAAATGGAGCTGTTCTTAATTTTTACAAGTCTAATGCAAAGCTTTACCTTTTTGTACCCTGAAAATGCTACAAAACCATCTATGGAGGGAAGGTTTGGTCTAACTTTAGCTCCCTGTCCATTCAAAATAATAGCTTTGGAGAGATGA--TACAACATCACAAATAGATGAAAAAGAAAGAAAT .........:......x.-:::x...:x...x...:.:x:..------------..:.::x.:.xx:.::....x.x..xx.x::.-----.:.:.....:..-.xx.:......x..:..x.....:........:..::.......:.....::.:...:....x...:::..:........:..:..::.x...x:x.xx.....::..x...x:..:..x:::x..:xx.....:.................:..x::......:..x....:x::..::::.......--x:..x.x:..x:..x.....:x...:.:.x.x.. 18M1I23M12D32M5I12M1D189M2D34M 202/308 65.6% 314/94230402 0.0% 21/308 6.8% 53037292 NA +3088 chr4 + 190214555 107964490 107964489 107964540 51 CAGCCAAAGCAATCTTGCTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 - 94230402 30866172 30866171 30866222 63364181 63364180 63364231 51 CAGCCAAAAGCAATTTGTGTGGTTTTTTTGTTTTTTTGTTTTTTTTTTTAA ........:xx.x:...:x..........x.......x............. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 77098318 NA +3318 chr4 + 190214555 107971412 107971411 107971485 74 GACCCCTGGTCTAATTTCACCATATTAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGTAAGAGAGATATATTGA chr4 - 94230402 87676326 87676325 87676397 6554006 6554005 6554077 72 GAACTTCAGTGTATTCCTACCAAA--AAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTGTTTTGA ..x.::::..x..x.:::....x.--..............................:...x.:.xx.:.x.... 24M2D48M 54/72 75.0% 72/94230402 0.0% 2/72 2.8% 20295086 NA +3122 chr4 + 190214555 107971432 107971431 107971467 36 CATATTAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652100 67652099 67652135 26578268 26578267 26578303 36 CATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ....::.............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 40319332 NA +3088 chr4 + 190214555 107971434 107971433 107971475 42 TATTAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGTAAGAGA chr4 - 94230402 37597024 37597023 37597065 56633338 56633337 56633379 42 TATTAAAAAAAAAAAAAAGAGAGAGGGGGAGGGAGAAAGAAA ................:........:.:...:...x....:. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 70374410 NA +9946 chr4 + 190214555 107989818 107989817 107990071 254 GCGCGGGCTGC---AGGGCCGCGTAGGTCCCCGCCCCCAGAGTCTGGCTTTCCGCGGCTGCCC--GCCTCGCGCGTCTTCCCTGCC-CGGGTCTCCTCGCT----GTCGC-CGCCGCTGCCAC-ACCATGGCCTTCGTCACCAGGCAGTTCATGCGTTCCGTGTCCTCCTCGTCCACCGCCTCGGCCTCGGC------CAAGAAGATAATCGTCAAGCACGTGACGGTCATCGGCGGCGGGCTGATGGGCGCCGGCATTGCCCAGGTGAGCG chr4 - 94230402 54918124 54918123 54918381 39312022 39312021 39312279 258 GCGCAGGCTGCTTAAGGCCCGGGCAG----CCGCTCCCCGGGGCGGAGC-------GCTGCCCTCGCCCCGCCCGGCCCCTCAGCCGAAGGGCCCCTGGCTTCGcgccgcgcgccttcgccattgccatggccttcgccacccgccccttcgtgcg---cgcggcttcctccgccaccgccgccgccacggcggccgccAAGAAGCTGATCGTCAAGCACGTGACGGTCATCGGCGGCGGCCTCATGGGCGCCGGCATCGCCCAGGTGAGCG ....:......---...x...x.:..----....:...x.:.x.x.:x:-------.......--...:...x..x.::.:.x...-x:..x.:...x...----.:...-....x::....:-:............:....x.x.xx...:....---..:.x.:.....xx........x.x...x....------.......x.:................................x..x..............:............. 11M3I12M4D19M7D7M2I21M1I14M4I5M1I12M1I32M3D33M6I74M 191/240 79.6% 258/94230402 0.0% 32/240 13.3% 53071694 NA +8050 chr4 + 190214555 108009742 108009741 108009902 161 TTCTTTTGTTGCTCTAGGTTGCTGCAGCAACTGGTCACACAGTAGTGTTGGTAGACCAGACAGAGGACATCCTGGCAAAATCCAAAAAGGGAATTGAGGAAAGCCTTAGGAAAGTGGCAAAGAAGAAGTTTGCAGA-AAACCTTAAGGTAATTTCTTATTAT chr4 - 94230402 54922544 54922543 54922704 39307699 39307698 39307859 161 TTCTTTTAATTTTC-AGGTTGCAGCAGCCAGTGGTCACACTGTGGTGTTAGTAGACCAGTCAGATGAAATCCTTAAGAAATCTACAAAAGGAATTGAAGAGAGTTTGAAGAGAGTGACTAAGAAGAAGTTTGCAGATAAGCCTGAGGTTGACATCTTTTTAT .......:x.x:..-.......x.....x.x.........x..:.....:.........x....x..x.....x:x:.....:.x...:........:..:..::.x.:..:....:.x.................-..:...x.:.x.:.:x....x.... 14M1D121M1I25M 123/160 76.9% 161/94230402 0.0% 2/160 1.2% 53087198 NA +10009 chr4 + 190214555 108014423 108014422 108014664 242 TGCATTAGGCCGGCGATGAATTTGTGGAGAAGACCCTGAGCACCATAGCGACCAGCACGGATGCAGCCTCCGTTGTCCACAGCACAGACTTGGTGGTGGAAGCCATCGTGGAGAATCTGAAGGTGAAAAACGAGCTCTTCAAAAGGCTGGACAAGTTTGCTGCTGAGTATGTAACCTCTGGACAATCTTCTTTTTTTTTTTTTTTAACCTTA--TTTTTGTTTTTCATTTTTATTTTT----TGTTTT chr4 - 94230402 54923615 54923614 54923856 39306547 39306546 39306788 242 TGTTTCAGGCTGGTGCTGAGTTCATTGAGAAGACTTTAAAGAACCTCACAACAAGCACAGATGCAGTAGCGGTGGTTCACAGCACAGATCTGGTGATTGAAGCCATTGTGGAGAATCAGGAAATTAAAAGTGAACTCTTCAAGAGGCTGGATAAGTTTGCTCCAGAGTAAGTACATTTT------TTTTTTTCTGTTTTATTTTCAAACTTGCCCCTTTGGTTTTGGTGGTTTTTTTTAATGTGTTTT ..:x.:....:..:.x...:..::.x........::.:.:x.x.x.x:.:..x.....:.......:xx.x..x..:...........::.....:.x........:..........x.:.::.x....::..:........:........:.........x.x.....x...xx:.:.------.:..:..:.x....x....:..x...:--::....x....x:.xx..x.....----...... 179M6D27M2I24M4I6M 170/236 72.0% 242/94230402 0.0% 12/236 5.1% 53090808 NA +9122 chr4 + 190214555 108019521 108019520 108019671 151 CTATATTTTCTCTTCACAGACATACAATCTTTGCCAGCAACACTTCCTCCTTGCAGATTACAAGCATAGCTAATGCCACCACCAGACAAGACCGATTCGCTGGCCTCCATTTCTTCAACCCAGTGCCTGTCATGAAACTTGTGGAGGTCAG chr4 - 94230402 54929584 54929583 54929734 39300669 39300668 39300819 151 CTTTTTTTTTTTTTTCCAGGCATACAATATTTACAAGCAACACTTCATCCTTGCAAATCACGCAGTTGGCTAACTCAACCACCAGGCAGGACCGATTTGGTGGCCTCCATTTCTTCAACCCTGTGCCTATGATGAAGCTTGTGGAGGTAAG ..x.x....:.:..:x...:........x...:.x...........x........:..:..:x:xx.:.....:x.x........:..:........:.x.....................x......:.x.....:...........x.. 151M 120/151 79.5% 151/94230402 0.0% 0/151 0.0% 53089937 NA +3805 chr4 + 190214555 108025351 108025350 108025428 78 CTTATTAGCTGTGTAACCTTAGGCAAGCTACTTAACCTCGCTGTGCCTCAGTGTCCTCATGCTTCACATAAGGATAAT chr4 - 94230402 11947207 11947206 11947284 82283119 82283118 82283196 78 CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAAT ..:.:..:......:........:x..::......:..xx.....:.:....x...:....:x.x.x..:.xx..... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 96078144 94136411 +4669 chr4 + 190214555 108027643 108027642 108027770 128 TAATGAAAATTTACT---AGTTTTTTGTTTTTCTGTCTCCCAAAACAGGACACTCCTGGGTTTATTGTGAACCGCCTCCTGGTTCCATACCTCATGGAAGCAATCAGGCTGTATGAACGAGGTATCCTTCT chr4 - 94230402 54932963 54932962 54933085 39297318 39297317 39297440 123 TAAAGAATGTTTATTTAGAATCTTTTTTTTTTCTTTTCTT------AGGATACTCCAGGTTTTATTGTAAACCGTCTCTTGGTGCCATATATGATGGAAGCTGTTCGACTTTTTGAGAGAGGTA--CTTCT ...x...x:....:.---.:.:....x.......x.::::------....:.....x..x........:.....:...:....x.....:x.x........x:.:x.:..x.x...:x......--..... 15M3I22M6D78M2D5M 89/120 74.2% 123/94230402 0.0% 11/120 9.2% 53094680 NA +6921 chr4 + 190214555 108034217 108034216 108034357 141 TTCTCTTCCCTCCGCTCAATAGGGTGGCATGAAATGGATGCAGAGAACCCATTACATCAGCCCAGCCCATCCTTAAATAAGCTGGTAGCAGAGAACAAGTTCGGCAAGAAGACTGGAGAAGGATTTTACAAATACAAGTGA chr4 - 94230402 54937600 54937599 54937740 39292663 39292662 39292803 141 TCCACTTCTTTTCTCCCATCAGGATGGCATGCAATAGAGCCCAACAATCCTCTTTTTCTACCCAGCCCACTCCTGGATAAACTGGTAGAAGAAAAGAAGCTGGGTAGGAAGACTGGAGAAGGATTTTACAAGTACAATTGA .:.x....::.:.x.:..x:...:.......x...:..xx.x:.x..:..x:.x:x..x:.........::.:.::....:.......x...:..x...:.x..:.:........................:.....x... 141M 101/141 71.6% 141/94230402 0.0% 0/141 0.0% 53096617 NA +31131 chr4 + 190214555 108047591 108047590 108048767 1177 AAATGCTCAGCACATT-AACTCAAACTGGAATGACAAACGTTA----------GGATGACAGT--TTTGGGCAAAGGCTGTGCCTTGCTTTTTTAAAAAA-TGGGTACATCAATGCTCATTTTAACAACTGGCATAAAATCCCACTAATTGGCTAATAAAAACAGATACAAATACAGAACATTTAAAGTAATAACAATTCAAGTGCTGGGCTTTTTACAACAAG-GGGGTGATAAGGAAAGAAATGAAAATTCACTGCAAACCAGTCTGCTGAACGCATCTGTTAAGGTTTACTGTTTAAAAAAAGAAAAGAAGAAAACAGAAGAAAAAATAAACTGAAATAGGGCTGCCAATTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACC---TTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCA--CAGAGAAGCCAC---TTACCAGACAAGCTGTCTC--------------------AGAAAAAGAAGGCTTCTTTTTATGTCATTATTTCAAACTT-TTCCAGAACTTTCAATTTTATTTAAAAGCTCATAGCTAGCAAAATATA---CAAGAAAATTA-AAACTAAAAAGTGTAAATTAAAAAAATTCAAGT---TTAAAAAAGCAAAA---AAAAACGATCCTTTTGCACTGTTAAATAAAAGCTTTAGGAGAAAAGAAAAGAAAGAAAAATGAAGCAGAAACAAAGAGGGAA-----CTCTTCCATG--AACTCC-TCCACTGGGGTGCTG-ATGGAT----GTGCT---GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGCAAGATGCTCTGGGAAGTGCAC-GCAGATATGAGGGGAG---AAAAGCTGCTCAGCTGCCCCACAGCCTGCTAGCATTCTCATGTGCTTTTACATTTCCTTTTAAAAAACCTTTTTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTG-----TTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCTCAAGAAGGAACAAA chr4 - 94230402 54949611 54949610 54950734 39279669 39279668 39280792 1124 AAATGCTCAGCACATTTAACTCAAACTGGAATGACAAAAAAAAAAAAAAAATTGGTTGTCAGTATTTTTGGCAAAGGCTGTGCCTTACTATTTAAAAAAAATGGGTACATCAATGCTCATTTCAACAACTGGCATAAAATCCCACTAACAGGCTAACAAAAACAGATACAAATACAGAACAATTGAAGTAAT---AATTCAAGTGCTGGGCTTTTTACAAGGAGAAGGGCGAT--GGGTAAGAAGGAGAACTCACTGCAGTCAGATTTGCTGGATGTAT-TGCTTATGTTTAC--------------AGAGGAGGTGATGCAAG---------ACTGACAT--GGCTACTG------ACCAGCTGACT-------GTTGTTACATTTATTTAGTTCTATATGACACTGTATTATATAGACTGAGAGGCCACTATTTGTTACAAGTAGTTTAACAAAAAAAGCCACCTTTTTCCATACAGGCTTTTCCTCTGGCAGGAGAGaaaaaaaaaaaaaaaaaaaggaaaataaaCCCCATTATTTAAAAAGTAGTTCAGATTTTTGACAGTTGTTTAAAAGCTCATACCTAGTAAAATATACACCAAGGAAATTACAAACTAAAAGTTAAAATACAAAAGCATTCAAGTTTCTTAAAAAAGCTAAAACCAAAATTGATCCTGTCGCACCATTAAATAAAA-----------------------------------AGAAGTTTTGAGTGTGTCATCCTGGTCCAGGCAAATTCCATTCCTCGATGTGCTGTATGGGCAGCGGTGCTCTAAGTTACT-----CTGTTGGCTGAAGCAGGCAGAGACAGCCACGCTACTTTGTTTGCTGACTCAACATGGACACAGATGAGACGAGGGCTTAAGAGTGCAAGGCAGAGGTGGAGTGAAGACAAAAGCTGCTCTGCTGACCCAGGA-----------GCTTATTCGCTCT-----------------------------ATTTATATCAGGGC-TGGACCTCGTGATAG-TGAAGGA--TTTTGGCAGTGATTGTCTTTATGATTCAGTGTCTTTAGCAGTGACATCAGGGTGAA--TGACATCCTAGACAGACTCCTTGGGGGTGGTCTGTGTGGATGAAGGACACACCTAGGGTTT--AACAAGCTTCCATCTCCAGCAGGGGTCCTGGTGTCGCCGCCTTTGCTTTGCAAGTTGAGAAAGCATTTCTTTTCCCACCTACAGGGGAAGAAGA ................-.....................x:xx.----------..x..x....--...x.................:..x...x......-.....................:.........................:x......:........................x..:.......---.........................x:..-:...:...--..:x.::..x..:..:........:x.x::.:.....:.:.:..-..:.x.x......--------------.:..:..:x:.::x...---------.....x..--....:.::------....:.x..x.-------.:.:..............:....:xx:....:---...:.x:.:.x....:........x.......:.:.:..:.--x.:.:.......---..x...x...:...x.::.--------------------.:.....:..::xxxxxx.xx.:x:........x...xx.-x.:....x:...x.xxx..:..............x....:........---....:......-.........:x.:x..xx:....:x........---..........x...---....x:......x.:....::..........-----------------------------------....::xxx...x.x:-----..xx....x.--..:...-.:.x::.:x......-....::----.....---:...:..-----.x....xx::x::......:.x:......x.:...:x.x:....:..xxx:x:.::.::x::....x:.x:x.xx..x:::......x-.....x:..::.x..:---...........x....x....x::-----------x..:..x:...:.-----------------------------x.....x.::.::.-...x:..:.:::...-:...:..--xx.....................:x....:....:..........x.......:..--...::..xxx.-----:.....x.....x.x...x.::.::x:x...x...x::x......--...................x..:........x.....:.....x........x....:...x.x::...x...:......xx..::.:.:x.:. 16M1I26M10I10M2I35M1I91M3D29M1I8M2D44M1D13M14D17M9D8M2D8M6D11M7D32M3I41M2I12M3I19M20I40M1I48M3I11M1I33M3I14M3I31M35D16M5I10M2I6M1I15M1I6M4I5M3I7M5D88M1I16M3I24M11D13M29D14M1D15M1D7M2D56M2D11M5I45M2D94M 771/1045 73.8% 1124/94230402 0.0% 211/1045 20.2% 53097980 NA +29159 chr4 + 190214555 108050481 108050480 108051693 1213 ACGCAGGAGGATCAAAGAGCTACGAAGGACCCTGCCTTTCTACGGAGAAAGAAACAGGGCTCTAGCAGAGCCTGGGGTGGGA-----GAGAGGGCACCCCACAGATTCCTATTTACATTATAATTTTGCATCACAGATTTTCAAAGGCTTGGTCCAGGTTGCTCTTCCTGGGAAGGTTTTCCTCTCAGTCTGACATGAAAACATTTAGTTTCCTGGTGAGGCCTGGCCTTGCAGTCCTAGGCTAGC-----------GCCTGAGACAAGCACTGGGACTCAGAATAGACTCGCCATTGGCAGCCAGGAACGCCT--------GAGGGAGACAACCTGCCCTTCTGTTGGG-----------CCATCCCACCACTGCCTGGCACAGCGAACTGT----GAAGTACTGAGGTACAGACAACTTCCATGGCCCTGCTGTGGCCC----CATTCTCAAGCAG-GGCTAACAC----CTCCAATCTAGAGCACCCTGCACTTCCGGCTCCACCAGTCTTCTTGTCCCTT---CACTGCCTTACCTAAGGGTGCCTTCTCCTCCTCTCTTAAGCTGAGTACAAGTGATAATATAGTGATTAACACAAACATGGGTGCCCAGAGATAGCCATTTACCTAAAGGATAGTA-TGTCACTTGCCAAGAAAGAGTCTATATCTCCTAATAAAGTCATTTCTTTCCACAGTCTCACATTTTCCCACCTGTTATTTCCTTATTCCATGGGGTCACCTTGCAAATTCTCCTGGAAAGTTGGCTTCAGAGAACCTCTGTACAGTTGCTTACCAAAAAGCA---------ACTAATCCCTTTCAGGGACTAGTGCTTAAAAAAAAAAAAGAGCAAAGAAATTCCTTCACTATGAAATGAGGCAGTTTGTCCCTGGTGGCTCTTTTAAAATACAGGGATGTCAGGGGAGACCAAGTCTTACTTCCAAGTGGGAGAAACGGGGGCCTTGTAGTGTTGCTTTACAGATATAAAACAGGTCCAGTCCAGATTATTTTCAAGAAACCACAGGCATGAGGCTCCAGGGGCTGGAGCTTTCCCACATCTAAGGCTTCACTGGGGGGCTGCGGCTGAAGCTGGGCCAGGCCAGGCGAGCCCCGGCACAGCCCAACCCACCAGTGAAGTCTGCGCAATCAAAGCCAGCAATTACTGCTCTCCGGCTGCGGCTGGGCTTCAAAGGGAGTGAGGCAAGGCCCATCTTACATATGTTCAGACTTGGGCTCCCTCCAC--CAGGAGTCACCAC-----GCATTTGTACTG chr4 - 94230402 54952644 54952643 54953725 39276678 39276677 39277759 1082 ACACATGCGGATCAAAGAGCTACAAAGGGCTCTACCTTTCCAAGGAGCACGAAAGAGAGGCCAAGCAAA--CAGCAGAGGAACACTGGGGAGAGCACCCTGCAGCTTTATATTTATTTTGTGCCTTTTCATCCCAGATTTTCAAAGGTTTGGTCCAGGTTGCTCTTCCTGGGAAGGTTTTCCTCTCAGTCTTACATGAAAACATTCAGCTTCCTGTTGAGGAATGGCCTTGAGGCGCCAGGCCAGTAGTTCACAGCAGTCTGATACAAGCGCTGTGATTCAGAGC-TACTCCCCATTAGCAGCCAGGAATGTCTACTTCACTGAAGGAAATGAAATGCTCTTCTGTTGAGATGGTTCCCTGCCTCCTCCCCCCTTCCCTTACCAGCAAGCTGTCTTTGAAGTCAGGAGGTTAAAATAACGGCTGCGGCCTTGCTCTGGCCCTCAGCTTTCTCCACCAGTGGCCGGCACTTCTCTCTCATCCAAA---CGCCGCATCAGCAGCTGC-----------TGCCTCTTTTCCACAACCTCTCCCTA---CGCCTAAACAGCCTCCTTT----------CCAGTAG--------------------------------GGAGGTTGC------------AGATAGTACTGTAATCTGCAAGGGGTCAGGC-------------ACAGTGA-----------AGCCCCAAATATTTTTATTTCTAA-------------------------GCAAATGCTGCAATA----------CAGAAAAT---TACACAGTGGCTATCCCGAAAACAGCATCTAGAACCCAGCCTTTTC-----CCAGCTGTTCATTACAGCTACATGCTGGAAATTGCTTCCACTG--------------------CTGAT------------------------------AAACCAAATAATAC--CTAAAAAATAGGAATGAGGAC-----GGTGTTGCCTTACAGATAGAAAACAGGTCAAATCAGGATTCTTTTCAAGAAACCACAGGCATGAG-CTGAGGAGACTGAAGACTTCCCACATCTAAGGCTTCACTGGGGGGCTGTAGCTGAAGTCTGGCCAAGCAAGGCATGCCCTAGCAAAGCCCAATCCACAAGCGAAGTCGGCTCAATCAAAGACTGCAATTACAGCTCCCTGGCTGCGGTTAGGCTTCAAAGAAAGTGCTGCAAGTCACATTTTACATATGTGAAGCCTTGAGCCTGAGCCACAATAGGAGGCACTGTCTGTGCCATTTGCACTG ..:..x.x...............:....:.:..:......:.x....x.x....x..:.x:.x....:.--.x.x:.x..:.-----.:...:......::...x..:x......:x..:.:x:...x....x..............:...........................................x.............:..:......x.....xx........x:.:x.:....:..:-----------.:....x......:...x..:.....::-x....x.....:...........:.:..--------..:...:.::.xx...:.........:.-----------..x:.:.x..x..x..:xxxx....:.:....----.....xxx.....xx.:.:...xx.:::....:....x......----.x.....x.x...-...:::...----...:x...:.:.---.x.:...::xx.:...x.-----------..:.:...---...x:...:x..:x.---:....xxx.xx....::..----------.x...::--------------------------------:...:.x..------------:.......-...x.::...x.:.::xx..x.-------------.x...x.-----------..:.:..x..x..:::.::.x.x.-------------------------......x..x.x:x.----------....:..:---.::.....x...xx..x:...:..---------..:x.x..:....-----.:..:xx..x.xx.x.:xx.x:x..x:::..x.x.:.:....:--------------------...:.------------------------------.:.....:.xx...--.:..:x::x..:..:.:..:.-----:.......:.........x..........x.:..x:....x........................-..xx:.:.:...:..x:...............................::.......::x.....:..x....:x....::...x.......:....x..:......x..x.........x.x........x....:.:........:.:..........::....xx.....x.x...:..........xx..x....:..::xxx....--:.....x...:::-----x......:.... 69M2D11M5I159M11I28M1D28M8I28M11I32M4I44M4I13M1I9M4I12M3D18M11D8M3I15M3D19M10D7M32D9M12D8M1I22M13D7M11D24M25D15M10D8M3D24M9I13M5D43M20D5M30D14M2D21M5D65M1D211M2I13M5I12M 732/1014 72.2% 1082/94230402 0.0% 267/1014 26.3% 53097837 NA +3093 chr4 + 190214555 108058622 108058621 108058676 55 CTTGATTTCACTCCGATTTATATACTTCTTATTCTCTTTATTTTTATATAAGGCA chr4 - 94230402 68691194 68691193 68691248 25539155 25539154 25539209 55 CTTGATCTGTCTCCAATTTATATACTTGTTTTGCTCTTTATTTCTCTGTGAAGCA ......:.xx....:............x..x.x..........:.x.:.:.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 39367428 NA +14346 chr4 + 190214555 108063414 108063413 108064438 1025 AGAAGAGAAAAGATAAAAGCATACTATATTGCAAATACATAGCCGGTATAAAAACCATCAGATTTTTTAAAGCACTAATTTGATTTTGCTGAGTTCTCCTCTTTAAGGAGCAATGTCGAATGAACTCATTATGAGCAAGAAGATTCACAAGCAAGTGCCTCTTTTTATAACAACTAACGTCAGCAGTAGGACCAGAGAGTCGTTCTTACCATGTTTCAGATGTAGGCAGCTGTCATTCTTGGACCTGTACCTGCAGAAAATTGTGT--CTTTAACAAATTTTTATTGAAGAGGTTTTTGTACATTCCAAATACG--TAGTAGCTACAATATCATGTG------------------------------------------AACTTGTTTGCTTTACTTTTCATGGTTCTTATACCAGCCATTTTTATTTGTGCAGTACAAGTAGTGGCCTTATTTTTAATGAAAGAAAAAAGGAAAATAAATGGGACCTCACTGATGTCTTGAATTAATGTACAAGAAAGACAAACCCTATCATTATGT-------TTTAAATT----TTTAAAAAACCCAAATC----ACAAAAGAG---------ATTCTCAAGGGAACACCAGGTAACATCATTTAATCAACATAAAATATTGTATCTTTAAGGAGTTATATAACATAGTAAAAAGGCAAGAGTGTTAAAGCAAAGTAAACACAGACAACAGAAGCAAAAATAAAACAAACAAACAAACAAAATCCCACAGTTTACAACCAGGATTCCAGGTGACAGGGTTTGGGAAACAGTTTTTACATGTACCTTCCCACAGTCACATTTAAAA-GAAGGGTCTTTTAAATTTTTAAAAGAATTTCAGGAAGAAAAAGCAGAGTTAAAGCATCATAAGTTACAGTCACAGAAGAAAGCAGTGTGTAGAGAGATGCAAACTGCCTTAAAAGGTGTTTGTCAGAAGCCTGAGGATTGACTGGAAAGTCTCATGGTGCCTACCTGATGCAGATTCCTGTAGTTTCTCTCTCTTCCTCTTCTTTTTCTTACCCTGGAAGAAGAGAGGTATACTGTCATGTCACAGATTGTACCATGAACACACAGA chr4 - 94230402 54962099 54962098 54963081 39267322 39267321 39268304 983 AGAAGTGAAATGGTGAACACCTA-----------ATAGATAGCCGGTATAAAAACCATCA--TTAGTCAAAGTA--ACGTTAGCTTTGGGATATGATACTTCT------GCCGTTTTTGCTAAATCCATATTATTGCATAAAATTGATAAGAAAG-----CTTGTTTTACAAATCAGTTTTATCAGGAAAGCTATAGAGATGTTCTTACCATGCTTCAGATGTAGGCAGCTGTCATTCTGGGGCCTGTACCTGTAGAAGATTGTTTTCCTTTAACAAATTTCTGTTACAGA-GTTTTTGCACATTCCAAATAAGTTTGTTTGCTACAGCATAACTTGTTTTTTTTGTTGTTGTTGTTTTTTTGGGGGGGTGTGTGTTTTTATTTTTTCATTTTTCTTTTCATGGTTCTTATACCAGCCATTTTTGTTGGGGGAA-ACAAGAGTTTCTCTTCCTATATTTTAAAGGCGAAGGGG--------GGGACCTCACTGATGCTTTTAGCCAGCCTACCAGGCAGCTG---TCTGTTAGTGTACGCAGAAACGTAAAATACGGTTGATAAAAACTAAAGCGGCTACAAAAAGGTCAGTGTGAACTTTCCAG----CGTCCAGTAATCCCAC----GCGACATTTGAGAGGTTAAGTCTAAGGA-CGATACAACAC--TGACTGGGGAGAAAAGCAAAGGTAAAGTAAAGCAGGACAGCGGTTGCAGCAAC-GAGTAACTTCAGACACAGATGTTGACG---CGCAGTCAGGA----AAGGCGTAAAGGAAAGGAAACACGTAATGTGTGCATTTTTACAAGCTCGCATTCAAAGTGAAGTATCTTTTAAAGCATTGG-------TCAGAAGCAAGTGTTAGAG----AGCAGCATGTA----------AAAATTAAATAGCGTG---------------AGCCCT----GGTTTCTGAAATACAGCTGACGCGAGGACTAAGAGCTGGACACGGCCTACCTGATGCTGATTCCTGCAACTTTTCTCTCTTCCTCTTCTTCTTCTTCCCCTGCAAAACAGGTG----------ATGTTAC----CACACCATG-ACACACAGA .....x....x.:.:..x:.x..-----------...x......................--..xx.:....:.--.xx..:::....xx:x:.xx.x..::.------..x:.x.:x:x.:..::...xx.:xxxx.x..:...x.:...x...-----...x..x..xx..::.::x.:.x...x.:::.:.x....x:............:.........................x..:..........:....:.....x.--.............:.:..:x...-.......:............x.--.:x.x......::..x.:x..------------------------------------------x.:..x..:::...x..............................:..x.x.x.:-.....x:x.xx:...x:.x.xxx.x....:x:..:..:--------...............::..x.:::.::x...x..:x..x::---:..:.:.x.:.::-------:x....x.----..x.x....x.:...x.----......::.---------.:.:..x..----.::.x:....:x:..:----x.:....xx:.x.xxx..xx.:......-:x...:....:--.:.xx:..x.::.:x.:x..:.:........xxx:....:.:.xx...:x..:-:.::..x:xx.x.x...:.xx::x..:---::..::.....----.:.xx::.::.xxx:.......xx.xx.:::..:.::..:x..x:x..:....:...:-....x:.........x:x..::-------....:.:x..:x:x:....----....x...:x:----------.:..xx..::..:...---------------x...:.----...x.:..xx.x.x:x....x.xxx.:x:x:.:..::xx.::xx.............x........:.::..:.................:.....x.....x..:.x::.x.----------....:..----:::......-......... 23M11D26M2D12M2D27M6D46M5D106M2I23M1D22M2I21M42I55M1D38M8D41M3D13M7I8M4I17M4I9M9I9M4D16M4D28M1D11M2D53M1D27M3D11M4D58M1I22M7D19M4D11M10D16M15D6M4D113M10D7M4D9M1D9M 592/912 64.9% 983/94230402 0.0% 184/912 20.2% 53101315 NA +9240 chr4 + 190214555 108070653 108070652 108070897 245 AGGGGCTTACATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATAATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACTAAAACAGAGAGGAAGGAAGAAAAAAACAAAAGTAAGCAAAATAGCAATAGCATATTTTATGTTTCAAAAATCAAAAAATGAAAATATTAAGCATTT---AAACTTTGATTTA---TTTTTAAATTGCAGAA chr4 - 94230402 54972855 54972854 54973083 39257320 39257319 39257548 229 AGCAACTTACGTAGTTGTCTCTTGCAGACCAGCCTGGATAAAGCTGCATGTGTAGCTGCCTTTCTTTACGAGCTAGTTCATAATATTTTGCTTGTTCTTCACGAGAGAGAGCATGCCACT----------GCAAACCAAATAAACACAGCATTAGACCAGGAAATAAC------TCCTACCT------AAGCAACAGATGACATAAGCAAGTATTTTTGTGACTTTGATTCAGTCCTTCTCCATTGCAAAA ..x::.....:..:...................................:........:........x..x....:............x..:..:........:.....:..........----------.x..:xx.:.x...x...:x.x..::.x.::x.::..:------.::..:x.------..x...x.:....x.xx.x:...:....---x:.........:.---:..:.xx......:.. 120M10D38M6D8M6D28M3I13M3I16M 168/223 75.3% 229/94230402 0.0% 28/223 12.6% 53097798 NA +9240 chr4 + 190214555 108070653 108070652 108070897 245 AGGGGCTTACATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATAATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACTAAAACAGAGAGGAAGGAAGAAAAAAACAAAAGTAAGCAAAATAGCAATAGCATATTTTATGTTTCAAAAATCAAAAAATGAAAATATTAAGCATTT---AAACTTTGATTTA---TTTTTAAATTGCAGAA chr4 - 94230402 54966712 54966711 54966940 39263463 39263462 39263691 229 AGCAACTTACGTAGTTGTCTCTTGCAGACCAGCCTGGATAAAGCTGCATGTGTAGCTGCCTTTCTTTACGAGCTAGTTCATAATATTTTGCTTGTTCTTCACGAGAGAGAGCATGCCACT----------GCAAACCAAATAAACACAGCATTAGACCAGGAAATAAC------TCCTACCT------AAGCAACAGATGACATAAGCAAGTATTTTTGTGACTTTGATTCAGTCCTTCTCCATTGCAAAA ..x::.....:..:...................................:........:........x..x....:............x..:..:........:.....:..........----------.x..:xx.:.x...x...:x.x..::.x.::x.::..:------.::..:x.------..x...x.:....x.xx.x:...:....---x:.........:.---:..:.xx......:.. 120M10D38M6D8M6D28M3I13M3I16M 168/223 75.3% 229/94230402 0.0% 28/223 12.6% 53103941 NA +15340 chr4 + 190214555 108078188 108078187 108078437 250 CATGAACATTTACACATGACTCGGCTACTTACCCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTTCTTTTAGAGTACACTCAGCAACGACATTCGCTCTCATTTCTTTCATGTATAACATAAAAGCATTCAGAGGCTTCTTAATGTGAGGTCTTTTTGGCTCCTGCTCCTTTCTCTGTTCATGCTGAGGCTTCCTAAAAGGTGGTGGTGGTGGTGGTTAGGGGAAGGGGTTGAAGGAATGAGGAAGGG chr4 - 94230402 54976554 54976553 54976787 39253616 39253615 39253849 234 CGTGAGCGCACACACACCCTTCTG-TACATACCCTTCTGCCAAGAATCTGGTTGATAGCTGCGCTTTCTTTCAGAGTACACTCTGCTACAACGTTCGCTCTCATTTCTTTCATGTACAACATGAAAGCATTCAGAGGTTTCTTAATATGAGGTCTTTTTGGCTCTTGTTCTTTCCTCTGTTCGTGCTGAGGCTTCCTAAAACGTGGTG-------------GGGGAAGGGA--GAAGGAGGGAAAAAAAG .:...:.::x:.....:xx:..x.-...x.................................:........:...........x..x..:..:.......................:.....:..............:........:.................:..:..:..:........:..................x......-------------.........:--......:x..::..::. 24M1D183M13D10M2D17M 199/234 85.0% 234/94230402 0.0% 16/234 6.8% 53101634 NA +10378 chr4 + 190214555 108079457 108079456 108079636 180 AAGGCAATCACAGCAGAGCCCGGGTGGATACTTACACGTGCATTAGGTCACTGTCAGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCAGGAGGACCGGGAATCATATGATGGGAAAACCTGAAAGGAGGAAAGAGAAGAA chr4 - 94230402 54977524 54977523 54977694 39252709 39252708 39252879 171 AGGGCTAGCACAGAAAGGC--------AGACTCACACATGCATTAGCTCACTGTCGTTGTGCGGATGTTCTTGTTTTACTTGAGGTGTTACAATAGCTGGGTGAGGGATTCCAGTTGTGTGAGGGCCTGGAGGACCAGGAATCATGTGATGTGAAAACCT-AGAAGAGAAAACAAAGGAA .:...x.x.....x.::..--------.x...:....:........x........:x....x........:.....x..:....................:........x...........:..:..x........:........:.....x........-.:.:...:...x.:.:... 19M8D133M1D19M 141/171 82.5% 171/94230402 0.0% 9/171 5.3% 53101933 NA +15224 chr4 + 190214555 108081436 108081435 108081742 307 CTAGTGTGGGAGCCAGGCACACTGC---ACAGACAGACACATGGCTGAGGTATGCACCC------TCCTAGCCAACCAAAAGGCAAGCAGAGGCGCAC-AGGATGCAAGCACGAGAAGAGCAACTTGTCCTCGAGCGCC------------CCAGTT-----TCCACCTCC---ACCTACCTGGACATGGAAGTGTCGACTGACAGTGAGGATGGGTAGGGTTGCCTGAATCCACCCGTGATGGGATATACAGGCTGACCTTGCCTGAGGTCACAGAAGAAAGGAACCCATCAATGACAAAACACCAGTTACCAACC----AGTAGTAAGAGTTGGATGAG chr4 - 94230402 54979332 54979331 54979669 39250734 39250733 39251071 338 CCAGTGTGGGATCCAGGCAAACTGTTATATACACAAATATGTTAAATAAAAATGTACACATAAAGTTTTAGCTGACTGAAAAGCAAGCAAAGGCAGACCAAGATGCAAGCA---GAAGAGCAACTTGCCCTCTAATGCCAGCAGTTACTCCCCAGTCAGTCATTCACCTCCTACACCTACCTGGACATGGAAGGGTCGACTGAGAGTGAGGATGGGTAGGGCTGCCTGAATCCACTCGAGATGGGATATACAGGCTGACCTTGCCTGAGGTCACAGAAGAAAGGAACCCATCAATCATACGGTACTCAGTAGTAACCCTAGAGTTGTAAGCACTTGATGGG .:.........x.......x....:---.:.x...:.:.::.x:xxx.::x...:..x.------.::....::..::...:.......:....:x..-.:..........---.............:....x.::...------------.....:-----.:.......---...................x.........x.................:.............:..x........................................................x.:.x:::..:x:x..x:....----...x.....x::.x....:. 25M3I31M6I33M1I12M3D25M12I6M5I9M3I143M4I20M 244/304 80.3% 338/94230402 0.0% 37/304 12.2% 53102104 NA +26581 chr4 + 190214555 108083077 108083076 108084343 1267 CAAATGCCCAAAGCCACAAAGGGAATCCATAAAACTATAAGCTTCAAAGCAAATGCTACA---GTCATTTTCTACCCATATTAGCAAAC--GGATCAATCCATTTCAAAGTCTGTATGTTTTTTAATCTTTTAAATTGAAATGAATAAAGTTAGCACCTTGCTTGTTGATGTGAAATT-----TCTTCAACTCCACAAGTGTTACCATTCATAAATCTAATTTCCATGAATGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCTTACCAGCCAAGAGGTGGGGTGATCTGTCCAACACCACCCGGAGACAAGGGATAAAAAGTAGGGATATCAGGAGCTGGAGGATGTCTGGACATGCCTGTTAAACAGAACAGAGAGGT--ATCATTTACAGATTCACAGGATATTTAACCAGAAATGCAACTACATGTTTTATACCATTCATACTTAAGG------------------------TTCAGAATGAAACAATATTTATTCACCAGATCCAAGGAACAGGAGTCCATT--TGTTAGCTTTTC---------TCAAGATTTCAA--CATCTGGGAAAACTGGGCCTTCAGAGAGTAT--------------TATCT----TAAGGAACTCCTACAGGAGTAAAGATG--CTGCTAGTAATACAATCATCAAAATAGACTTTTAAATTATTTGTTTTGCCCTCAATATTTCACATTATTTAAGAAAATGGTAGACAATTGTTTTA--------TATAGAATGAGAATGTTTTTTTGTAGAATGGAAAATGACAGCCCTTCGTAAGTAGATGGCTTGCCACAAAGTTCAAGGATTAGGTAAATTGCCATTTTCATATTTTCATTGGTTCCCTTATGGACATATAGATTTGGGAAATGTGACACCTCAGAGGATCAAAGATTAATTAGGAATCATCTTCAGCCCCATAATGGTCACATTTGATATGATTCATTTGGT------------------CTCTGTCTAAGCTCTTCATCAAGTTGAGTCCTCTGGGCTGCAAGGTCAAGCTGTTCTGGATTAGCTGAATTCCACAGAAAATGAAAGTGCCA---CCAAATTGTTTCTTGAGCTCACAGTCCCTGGAGTACACTGCCCTGTAACTGTGAAAACCACCTAAAGATTATATGTAATCCCAGTCCCA-AGTGACATC---CCTTTATACCTTACCCTAGGTACAGA----AGAAAAAAATGACAAGACAAATGCATAAAATGTAAAATATAACAACTTAGATTCAATGTGTTTGGGGGAAAGTGATTCAGAATAGAAAAAAAGCCACAGATGTGTCTTCACATAGCTAATGA-TGGCTTTAAAAG chr4 - 94230402 54981279 54981278 54982551 39247852 39247851 39249124 1273 CAAATGCCAAGAGCCACAAATCCGAGCCATAAGACT-------TCAAAGTGAAATCTACACACTTCAATTTCTGTACGTGTTCAAAAACCAGATTCAATTCATTTCAAAGATCA-ACATTTTTTGATCTTTTAAACTCAAAT-AACATAGTTA-----TTTCTTACTGCAGCGACATTCTTATTTTTTAATGCTGCGACTG-------------ACTCAACACCAGCGGATGGTACA------AACATGCAC-------CTTGTCTGAAAAGAAGCTGAAAGATCTTACCAGCCAAGAGGTGGTGTTATCTGTCCAACCCCCCCTGGAGACAAGGGATAGAAGGTAGGGATATCAGGAGCTGGAGGATGCCTGGACATGCCTGTTAAAGAGTACAGAAGAATGAATGACTTTCA---CCTCAAAATACT-----------GCAAATGCAAGTT----ACCATTCACAACTAACACAGCCACCGCTATGATGGAATACTTTCTGGGTGAGA-AATAACCACTTTTTTGGTC---GGAGTTAAAGGCCACTCATGCCACCTTTTAAATAATAAGTAAGTATTGCAATTCACATGGAAATACTGGGGGGGAAATAAGTGTAGCGGCACAATAAATGTCTGGGCTAAGGA---CCTGCATAAGTTCAGATTTCCTGTCAG--GTGTGTTAGGCAAAACTGTCCTCTACATGGCT-------CTACCAA-----------ACCCAGCAGAATCCTGAGGAACTCCTCCAACAAACAGCACGAAGCAAGACAAACT------AAAATA-AAAATAAAGCACTGTCAGAGGCAG------CACAGCAGAGCTATTAGATTAGGTAAATTGCTACTTGCACATTTTTGCTGGTTCCCTTATGGATTCACTGATTTTGGAAACTTGTTACCACAGAGGATCAGTGGTTAATTAAGAATCATTTTCAGGCCTGTAATGGTCACACTTGATATGATTCATTTGGCTTCCAATTGTCACTCCAGCTCCAACTAAGCTCTTCATCAAGTTGACTCCTGTGGGCTCCAAGGTCAATCTGTTTTGCATTGGTAGTATTTCATGGAAAAATAAAGGGTCCCATCTGAAACGTTCCATTAGCTCACATTCCCCAGAACACAGAGTCCTACAATTGTAAGAATCACCTCAAGATTAAAGCTAATCCTGGTCCCAGAAGGGCCTCTGGTCTCCATTCTTCACCTCAAACTCACACCCCCAGGAGACATGGAATTACAGTTGCAGAGGCCGCAAAGAACATCGGTTTAT-TTAAATATGTTTGGGGAAGAG-GAGACTGAAGCAGAAGGAAGTGTTAAGT-CGACTTCACATGTTAAATCAGCTGCTTTAAAAG ........x.:.........xxx:.x......:...-------......::..xx.....---x...x.....::x.:.:..x:x....--.:x.....:..........x:::-.::......:..........:.x....-..:.x.....-----..x...::..xx.:..x...-----.:..:..:x.::.:.x..-------------.:::..:x:.x::.:....x.x:------......:::-------.:..x.....::.x:xxxx..:.x....................x..x...........x..x..:..............:..:..........................:..................x..x.....::::.--..x.:..x..---:.x..::...:.-----------....x.:..x...----........:.x:...x:------------------------...x.::...:.-....x::.:.:x::x.:..---...::x::..x...:.--..::.x.....x---------.x.:x...x...--..:x...:..x......xxxxx.:x:...:.--------------.:...----......---...:..x:...xx....x--...::..--:.:::x.x:x.....:x.x.:.:..x..x::.-------.:x:...-----------.:::.:x.:...xx.:::x..:.x:.::.--------:.:::.:::...xx:x:.------.:...:-.....:.x:xx.:x..:x.:.:..------::.x:..:..:.xxx:...............:.:..x..:.....:::...............:x:.:x.....x.....:x..x:...x..........:x.:.......:.......:.....x..::...........:..................:------------------...::x.....................x....x......x.........x.....:..x...:.:x.x...:..::.....xx....x.:.x---.::..x:...:.x.x........x....::..::...xx.:...::..:...:.:..:.....x.......x.xx......::......-.:x.:.x..---:..::..x.:.:...::.:::x..x.----x:::.:.x...:x.xx...:x....x.::x:.:...:x.:.x.:::...x-..x...:.........:.:..-..xx.x...xx::..::...:xx:.::.-:.x........:x:x...x.-:x.......... 36M7D17M3I26M2I23M1D27M1D10M5D20M5I18M13D23M6D9M7D143M2I10M3D12M11D13M4D17M24I12M1D19M3D16M2I12M9I12M2I31M14I5M4I6M3D18M2I7M2D32M7D7M11D29M8I18M6D6M1D24M6D161M18I92M3I89M1I9M3I26M4I50M1D21M1D28M1D20M1I12M 787/1166 67.5% 1273/94230402 0.0% 208/1166 17.8% 53101798 NA +9859 chr4 + 190214555 108089120 108089119 108089268 149 CTCACCTTGTTTGGAGTTGACATCTGATGGGATGTGTGACGGGTGTGATCCTGGAGAAAAGTGCTCGTCACTGTAAGTGATGAGGGGGGTGAGAGGATGGACCGCATGGGATGGCTGCACCACGGGCACTTTATTTGACTGCAAAGTAA chr4 - 94230402 54984561 54984560 54984709 39245694 39245693 39245842 149 CTCACCTTGCTTGGAGCTGACGTCAGAGGGGATGTGAGATGGGTGGGAGCCTGGGGAAAAGTGCTCATCGCTGTAGGTGATAAGGGGGGTGAGGGGGTGAACTGCGTGAGAAGGCTGTACCACTGGCACCTTGTTGGACTGCAAGAGAA .........:......:....:..x..x........x..:.....x..x.....:...........:..:.....:.....:...........:..:..:..:..:..:..x.....:.....x.....:..:..x........::x.. 149M 120/149 80.5% 149/94230402 0.0% 0/149 0.0% 53104559 NA +29989 chr4 + 190214555 108092007 108092006 108092433 427 TTCTTTCTTTCCAGAGCACCACCTTAAGGAACTTGCATTAGCAGGCAGCATCTTCTTAATGTCTGACCTATCCCTCCAGTCATATAGCTCAGAATCTGGTGCCATGAATTTTTGCTAAATTATGCTATCCTTGCTCTCCTCTTAATTTTACGGTTTTCAACACAGATTTGCTTTCCTGTGGGAAAGAGATAAGAAGCCGAGGATTTTAATTTAAGC-CTGGCCTTGTCTTATATTTTGCAAGATGGATAGCGAAAGCAGTACTAGTAGGTGTGTTAAAGCCAACAAGGATTATGTCCATTTTTGTGGCCAAATAATAAAAGTAATATGAAATTTCAATAGCATGTGTGAGCAGAATTCCAAGGGTTATGGTTTGCTTCCTGCCAACCATCTCCACTATGTATATAAACA-GAACAAAGTGGATTCCAAC chr4 - 94230402 54985479 54985478 54985905 39244498 39244497 39244924 427 TTCCTTGTTTCCAGAGCACCACCTTAAGGAACTTGCATTAGCAGGCAGTATCTTCTTAATGTCTGACCTATCCCTCCAGTCATATAGCTCAGAATCTGGTGCCATGAATTTTTGCTAAATTATGCTATCCTTGCTCTCCTCTTAATTTTACGGTTTTCAACACAGATTTGCTTTCCTGTGGGAAAGAGATAAGAACCTGAGGATTTTAATTTAAGCTTTGGCCTTGTCTTATATTTTGCAAGATGGAGAGAGAAAGCGGCACTGGTAGGTGTTTTAAAGCCAACAAGCATTAGGTCCGTTTTTGAGACCAAATAATAAAAGCAATATGAATTCTCAATAATATGTTTGAGTTGAGTTGTAAAGGCGATAG--CGCAGGCTGCTGTTCATCTTCCCAATCTGTATACATGCGACCAAAACAGACACCAAC ...:..x.........................................:..................................................................................................................................................x.:..................-:.............................x..x......:.:...:........x..............x....x....:......x.:..............:........x.:......::....x....:x..:..x:..:..:x..:.--:..xxx....::x:.....:.x.x..x.:....x.::-..x....:::..:x..... 216M1I153M2D37M1I19M 371/425 87.3% 427/94230402 0.0% 4/425 0.9% 53106528 NA +3302 chr4 + 190214555 108093964 108093963 108094095 132 ATTATCCCCCTTTTACAGATGAGGAAACAGGCATGGAGAAG------AAAATATTCTTGAAGGGTATGTGCTCTAGCAAGCAGCCAAGCCAGGATTCAAATGCAGAAGTCTGGCTCTAGAGGCCAAGCTCATTACCTG chr4 - 94230402 76927343 76927342 76927467 17302936 17302935 17303060 125 ATTATCCATCTTTTACAGCTGAGGAAACAGGTATGGAAAAGGGAAGCAACACATCC--------AACGTCATTTAGCAAGC--CAACGCCAGAATG-AGATAAAAAACCTTGG--ATAGCAGTCCAGTGCTTTACCTG .......x:.........x............:.....:...------..x.:..:.--------x.:..xx.:........--.x.x.....:..x-.:..:x.:..x::...--x...x:.:.x..:x.x....... 41M6I9M8D17M2D13M1D16M2D23M 87/119 73.1% 125/94230402 0.0% 19/119 16.0% 31166621 NA +3059 chr4 + 190214555 108099501 108099500 108099571 71 TATATATATATGTGTATGTATATATATATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..:::.:..:::.:.:.x.....:....x.x.:....::.....x..:.....x:.:....... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 36469366 NA +3032 chr4 + 190214555 108099502 108099501 108099578 77 ATATATATATGTGTATGTATATATATATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATA chr4 - 94230402 19704274 19704273 19704350 74526053 74526052 74526129 77 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA ..x..x...::.:...:::.......x.:.:.....x:..:............x..x.xx....x.x.xx..x..:. 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 88395228 NA +3483 chr4 + 190214555 108099521 108099520 108099573 53 TATATATATATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...:.......:..:.....x.....:...x:...............x.. 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 88395244 NA +3259 chr4 + 190214555 108099529 108099528 108099620 92 TATATATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATAT-------------------ATATATATATATATATATATATATATATATATATATATAAA chr4 - 94230402 48089497 48089496 48089607 46140796 46140795 46140906 111 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAA .:..x:.x.......::::.............x.x................-------------------.:..x...xxxx...:..x.:x..::.:.:....x.:.... 51M19I41M 66/92 71.7% 111/94230402 0.0% 19/92 20.7% 60010032 NA +3033 chr4 + 190214555 108099533 108099532 108099589 57 TATGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATAT chr4 - 94230402 57691394 57691393 57691450 36538953 36538952 36539009 57 TAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATAT ..x...:...::..:x..........:x.........::..x....:x...x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 50408139 NA +3585 chr4 + 190214555 108105763 108105762 108105843 81 TTTCATTAGCCTCCCATCACAGGATATGTGCAAAGTGACTCCTGGGCTTGAGATGAAATATTCATTT---ACCTTATAAAGAAA chr4 - 94230402 54995248 54995247 54995331 39235072 39235071 39235155 84 TCTCATTAGACATCCATCACTGGATGTGGGCAAGATGGTCCAAAGGCTTAAAATAAAATATTCATTTTTAAACTAAGAAAAAAA .:.......x.x:.......x....:..x....::..:::.xx:.....:.:..:............---.x..x.x...:... 67M3I14M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% 53110515 NA +3585 chr4 + 190214555 108105763 108105762 108105843 81 TTTCATTAGCCTCCCATCACAGGATATGTGCAAAGTGACTCCTGGGCTTGAGATGAAATATTCATTT---ACCTTATAAAGAAA chr4 - 94230402 54991396 54991395 54991479 39238924 39238923 39239007 84 TCTCATTAGACATCCATCACTGGATGTGGGCAAGATGGTCCAAAGGCTTAAAATAAAATATTCATTTTTAAACTAAGAAAAAAA .:.......x.x:.......x....:..x....::..:::.xx:.....:.:..:............---.x..x.x...:... 67M3I14M 59/81 72.8% 84/94230402 0.0% 3/81 3.7% 53114367 NA +3641 chr4 + 190214555 108117614 108117613 108117680 67 GCCGGCTGAGTGTCACCACTCCAGGAATGTCTGACCTTTCCCAGGGCTTTGATCAAACGACCTCCTG chr4 - 94230402 54997761 54997760 54997827 39232576 39232575 39232642 67 GTTGGTTGAGTGTGGCTCCTGCAGGAATGCCTGACCTTTCCTGGGGCTTTGATCATGCTGGCTCGTG .::..:.......x:.:x..x........:...........::............x:.x:x...x.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 53119853 NA +3772 chr4 + 190214555 108117614 108117613 108117680 67 GCCGGCTGAGTGTCACCACTCCAGGAATGTCTGACCTTTCCCAGGGCTTTGATCAAACGACCTCCTG chr4 - 94230402 54993167 54993166 54993233 39237170 39237169 39237236 67 GCTGGTTGAGTGTGGCTCCTGCAGGAATGCCTGACCTTTCCTGGGGCTTTGATCATGCTGGCTCGTG ..:..:.......x:.:x..x........:...........::............x:.x:x...x.. 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 53124447 NA +4019 chr4 + 190214555 108124445 108124444 108124518 74 CTGCAACCTCCGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGTAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:...:.........x...x.xx.x........::..................x...:.. 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 89927319 NA +3016 chr4 + 190214555 108138487 108138486 108138542 56 AGGTGTGTATGTGTGTGTATACACACACACACACACACACACGAGTATGCCTGACA chr4 - 94230402 38920396 38920395 38920451 55309952 55309951 55310007 56 AGGAGTGTTTGTGTGTGTGTTTACACATTCAAACACACACATGAATGTACATAACA ...x....x.........:.x:.....:x..x.........:..:.:.:.x.:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 69218091 NA +85070 chr4 + 190214555 108140206 108140205 108142241 2036 GGAGGGGGGAAAAGCAACTT-CATTGAAGCCAACGCTCCAGGCAGCCCTGGAGCAGACTGGATCCAGTTTGAAAAGAACTGGCAACCCTAAAACTTTTTGATAAGATAAAAATTCATTGATGTTGGCTCATATGAGGCCCACTTCAACTCTGCACTTGTCCTCCGTGTTTCCTTGGCATATCTGCTCCTTTCCTCTATCTACTTTAGCATAACTTTATTTTTCTCTTTTATCTTTCGATAACTGCACCCAGGGACCGGAGGGGATTGATTTTTTGTTTTGACTTATTGTTTGAAGATCTGTAACTCAAAGCAGCT-CTCACGCCTCTGATGTCTAAGCTGGAGCAGCATAAAAGGTAAACCCAGGCCTGGGTATCAAACTGAGCAGAAGCAATACCATTTTATAATCAGCCATCTAGGTTTTCATCTTATTTTGACTTTCCCCTCACCCGGAGTCAGGTTAGCTAGCAAAGTGCGAGGTTACTCCTACGCCTTTGTTAGGTGACAAGAAGCAAGTTAAAATAAAAATAAATACCTCGATAGCTT------TGCATGCCAGGGCTTCAAGATTAAGCATACTTGTACTTAAAGCAAAAAGTTATTTCCTAC---------CTAGAAAAATGCCTTGCTTTTCTTCTCAGTGAAAGGAAACTTCAACACATTTGAGAAAGTTGCTTTTCAAAAATTAAATCTGAAAACAAGGGAAGATGGTACAACTGACAAAAATCATTTCCCCAAAAAGCCTCAATCAAGGTGAAAAAACATAATGCTTT--TTTGAGACAAGTTTACAGACTCAAAATAAAAATGTTATTCTTGAACCAGAAGATGTTTAAAGAGAGATCCATATATATTAGGTTAGAAAGTTAGTTGTGTTTTCAGAGTTTGGTGTTAGCAGTAGTATGTACTCCAAATCAGCAAGTGTAATAAACCAAAGTTAAATTCACTTTCCTTCTCTCT---TTCAGTATAATCCTCAAATTATTAGGATTATTTTTGTCCTAATTCAGCCAATATCAAATTCATATGTTAGTCTCTGTACATACAAATATT---CACAAGAGTTTTGAGGGTCTGTTCCCTGAAGTTGTTCAGCTTGCTGAAATATGGTTACATATGCAAACATTATCTCCCAATTGTAACCTCATTTTCTGCTCTGCTGGACAGCGTGACCAGTATTTGTCATTGTGCCTCCCCC-CCCGCCACATCATTCATATGTCTATAATTGTCATCGAGATGTGGCATGTCAGCGGGACTCCAGTGTTCTCTGCTCCCCGTCTTCACACAGTCACTCAGGTAACAAACCCGTAATCTCGTCCTGTTTTCATGATGGTTGAATTACACATAATTGTTTCTGCACAGTGATTGATTTCTGCCTGAATAGAGACCTCTGCCTTTTTTCAATGCAAGCGAGTGGCAGCCAAGTCTCTCCATCTAGGAGGAGGCAGCAGCCTTTGAAGAGATCAAAGCCAAGGCCGCAAGCAGTTGTGCGCCCTGGGAATATGGAAAGCCTTTATGCTCTCAACCCCATTTCCAGCATCATGTTGGATTGCAGCTGCATTACATTCTGCCAGCATTCTTAATGCTTTTAGTATTGACTCTGACATCACCGATAGCTGTTTTAAAGTAACAAAAGCCGAAGGATGACTTATTTTCACAACTCTGTAATTGGAACATGCAAAGATGGGGGTGGGGAAGCAAGAATGAAGGGGAGGGAAATACATTTGCTTTTAATTTAAAGCAGCACAAAAGGCCCAGAAAAAAAATTATGTAAGTTTCCACAAATGAAAACCATGTTTTTCATATGGAAAAACCAGCAGGGGCA-TTTTATAACTCAGACCACACAAAATGAACTGATGGCTAAATACACACTTTTTCAAGCCTAAAGGGTAAAATAAAA--ATGATGGGGTAAGTGATTCCAATTGGGAAA-------GGGACTCTAACATGTATTTGGTCTGAAGACTTTGCAGACACCTGATGCAAGGTGAACGGGTGCAGCTGCTAAAGACCTGTCCCGCGCCCTTACCTGCTCCTCCTTAGCCCTTTTTAATCAACTAA chr4 - 94230402 55005189 55005188 55007068 39223335 39223334 39225214 1880 GAGGGTGGAGAGAGCAGCTCGTGCTGAAGGCAAGGCTCCAGGCAGCCCTGGAGCAGAGTG-ATCCAGTCTGAAATGAACTGGCAACCCTAAAACTTTTTGATAAGATAAAAATTCATTGATGTTGGCTCACACTGGGCCCGCTTCAGCTCTGCACTTGTCCTCTGTGTTTCCTTGGCATATCTGTTCCTTTCCTCTATCTGCTTTAGCATAACTTTATTTTTCTCTTTTATCTTTAGCTAACTGCACCCAGGGACTGGAGGG-ATTGATTTTTTGTTTTGACTCATTGTTTGAAGATCTGTAACTCAAAGCAGCTTCTTGCGCCTCTGATGTCTAGGCATGAGCAGTATAAAAGGTGAAGCGTGTCCTATGTACCGAGCCGAGCAGGG---ATACCGTTCTATAATCAGTCATCTGTGTTTT------ATTTTGCCTTTTC-----------GGGAGGAAAACTA-----------------TTTTAAGACTTTAT-----------AGGCAA-TAACACTTGAAATAAATATTCTCGTGGCTGATACTATGCACGCCGGTTCTTT-------------CCCGTTTTAAAGACAGTGCGCCATTGCTCACTACTAGGGGCAAAAAAAGCACCAAG------TTCCTAATTAAAGGAGGCCATTATAAATCAGAAGATATT-----TTGACCATCATGTC--ACACCCCCGGCAGCC--TACTACCGCCAAAA--CGTTGCCATGCAAATCC------AAG------------AATGCTCTGCTTGGGGATGCGCT----GCCGCAAGGCGAAACAAATCCCCTCCGATGAGGGAAGGCAGAGGGAGGGGACGGCGCACCCGCGCTAACCCGCTCCCATGCGCTCCC-----TTTGCCCTCGGGGCTGGAGCTGCCTTCTTTTAGGAAATT----------------------CTTGCCCTCAGGCTGCGTCCAGCAGG-----CAGCTCATTAGGACG--TGGTGCCCGGGTTT--CTCACGCAGAGGTCGCAGAAAGCTCGCCGCGCGCAGCGGTGTTGTTTACGATAGCCCATCTCCTCCGCTCCCTGAAGTTGCCCAGCTTGCTGAAATATGGTTACATATGCAAACATTATCTCCCAATTGTAACCTCATTTTCTGCTCTGCTGGACGGCGTGACCAGCATTTGTCATCCCGCCACCCCCGCCCGCCACACCGCTCGCACGTCCCTAATTGTCACCGAGATGCGGCGTGCCAGCGGGATGCCGGTGTCCGCTGCTCCCCATCTCCACGCAGTCACTCAGGTAACAAACCCATAATCTCGTCCTGTTTTCATGATGGTTGAATTACACATAATTGTTCCTGCACAGTGATTGATTTCTGCCTGAATAGAGACCTCTGCCTTTTTTCAATGCGAGCGAGTGGCAGCCAAGTCTCTCCATCGAGGAGGAGGCAGCAGCCTTTGAAGAGATCAAAGCCAAGGCCGCGAGCAGTTGTGCGCCCTGGGAATATGGAAAGCCTTTATGCTCTCAACCCCATTTCCAACATCATGTTGGATTGCAGCTGCATTACATTCTGCCAGCATTCTTAATGCTTTTAGTATTGACTCTGACATCACCGATAGCTGTTTTAAAGTAACAAAAGCTGAGGGATGACTTATTTTCACAACTCCGTAATTGGAACATGCAAAGTTAGGGGAAGGCA------------------------GCATTTGTTTTCAATCTGAAATACAAAAGAAAGCACAG----AAAATTATATAAGTTCCCCAAAATTAAAAACATGTTTTTCATATGGAAAGAACAGAGGGGGCATTTTTATAGCCTAGACCACACAAAATGAACTGAT---TATGCACATGTTTTTTCAAGCCTAAAGGCTGAAGTAAAAATATGATTGGGTAAGCGAGTCAAATCGGGAAAAAATATTGTGACTC-ATGGTGCATTTAGT-----GACTT--CTAGCACCTGATGCAAGGCAAAATGCTACAGATGCCCTGG----GTGCTGCTTC----------CCTCTGCAGCTCCTTGTAGTAAACTGA .::..x..::.:....:..:-:::.....x...x.......................x..-.......:.....x.......................................................:.:x:.....:.....:................:....................:...............:..................................x.x.................:......-....................:...............................-..::...............:..xx......:.........:..x.xx.x...:x...:.:.:.:......::---.....:..:.........:.....:x.....------......x....:.-----------.xx...xx.:...-----------------.::..x.x....:.-----------.:....-.x.x.x.x:.........::::x:.:...x------....:...:.xx...:-------------.::..x:.x..::..:x:x.::...x.::..---------.x.:....:::..xx.------...::.:.x......::.:x:x.:.x..:x..::.x:..-----.::.xx..:.x:..--.x.x.xxx..x..x:--...x..:.x.....--.:..x..x::x...x..------...------------......:.--..x.:..::x.:.----.x.x...::::...xx:x.x::..:x:.:x..:::.x.:xx.::...:.:x.x::::.:x:xx.x.x.xxx:x.:xxx..:.:.::.-----..x.:x:.x.x:.:x.x.xx.:.:::xxx.:..x..:.x----------------------...x..:..xxx..---.:...:.x:-----..:x.:.......:x--.xx..:..x::..:--.:x.:::x:.:x..::.x:xx:x..x.:.::.::.xx::.:..---:..:.x..:::xxxxxx..:.:............::.........................................................................:..........:.........:x:...x.....-.........:.::..::.:...:x.........:.......:...:..:........:x..:....:.x.........:...:...:......................:.............................................:.....................................................:...........................x...........................................:........................................................:....................................................................................................:..:......................:...................x.:....x:..x.------------------------:......:...:...:.:..::.xx.x.:..:..x...----........:......:..xx....x....x...................:.x...x:......-.......:.::......................---..x::...:::.................x.:..:.....--.....x.......:..x..x...:......-------.x.....-.xx:..:....:..-----.....--.x::..............::..xx.x.:...x...:xx:.----..x.:..x:.----------....:x:...:.:..x..:.x....:. 20M1I39M1D201M1D52M1I72M3D31M6D13M11D13M17D14M11D6M1D30M6I16M13D31M9I16M6D39M5D14M2D15M2D14M2D17M6D3M12D8M2I13M4D87M5D39M22D14M3I9M5D15M2D14M2D43M3I142M1I498M24D38M4D63M1I33M3D39M2I30M7I7M1D14M5D5M2D40M4D10M10D27M 1431/1844 77.6% 1880/94230402 0.0% 228/1844 12.4% 53135017 NA +3169 chr4 + 190214555 108149592 108149591 108149661 70 TTTGTGTGTATATATGTACATATATATACATGTGTATATATATGTACATATATGTACATGTGTATATATA chr4 - 94230402 17853463 17853462 17853532 76376871 76376870 76376940 70 TCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTA .:.:.x...x......:......:......::x...xx.x.:.:.:....:.....:x.x..:....:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 90296129 NA +3424 chr4 + 190214555 108157149 108157148 108157225 77 TCTCTCTCTCTCTCTCTCTCTATATATATATACACACACACACACACACACACACACACACACACACACACAAACAC chr4 - 94230402 80495418 80495417 80495494 13734909 13734908 13734985 77 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ..:..:.x...:......x.:.......:.:.x...x.:.::.........x..xxx::...x........:xx... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 27661731 NA +9788 chr4 + 190214555 108163562 108163561 108163743 182 ACTTACTGTTCTCGGGATGGGTGGAGAAAGAGATCCATTTGACATGTATGGGTCGTTATTCATATTTGGCATCATTATGTACCCGGAATAACTCGAGTAGGAGGGTCCCTTGTTGTAGAGGCCTCCATCTGGATGCTTTCCTGGGAAGATCCAAAGAACAATCAATGATGCACTGACTTCCC chr4 - 94230402 55028902 55028901 55029076 39201327 39201326 39201501 175 ACTCACTGTTCTGGGGATGGGTGGCGACAGAGATCCGTTAGGCATGTACGGGTCGTTGTTCATATTTGGCATCATGATATACCCCGAGTAACCAGAGTACGATGGTCCCTTGCTGTACAAGCCGCCGTCGGGATGCTTTCCTAAG-------GAAGAAGAGACAACGACGGTGTTATTCCCC ...:........x...........x..x........:..x.:......:........:.................x..:.....x..:....:x.....x..x.........:....x.:...x..:..x............::.-------:.....x.:x...:..:.xxx.x.:.:... 145M7D30M 138/175 78.9% 175/94230402 0.0% 7/175 4.0% 53134660 NA +15601 chr4 + 190214555 108167451 108167450 108167863 413 GGGACCCTCAGCCGGG---CGGCCG-------GGCGCCTTCGTTCCCTTCCTCCCTCTCTGAGTTTCCCAGGGACCCGCCACGCCTCTCGGAACTGGGGCAGCGGCCCGCTCACCTCGTGTCCGTTGCTGGCCGGGATGATTTCAGACTCGTTCACCAAGGAAGACTTGATGTCAGCTAAATCGCCTTCCTCTTCGGGATGACTGATCTCGGCGAAGATCTTTTCCTTCTGAGGATCGCCCTCGTCCTTGAAGGGGATCATCTCGTCCGTGGCGCAGAGTTCCGGGTCCCCCCCGCCGCCGCCACCTCCTCCGGAGAGTTGGGGCATCCCGGCGGC------------TCTGTAATCTCCGCTCCGCTGTGGGAGCACCCGCGCAACAGCAGGAAAGACAGAGGGGTAACTCAAGGGTGGGGGAGGAAAGGAGAG chr4 - 94230402 55030834 55030833 55031217 39199186 39199185 39199569 384 ggggccctttgccgggtctcggccgccaccgcggggc--tcggccgcccctccccgctc---------------cccgccgcccc-----------------cggccc-cTCACCTCGTGCCCGCCGGAGCCGGGCGCGATCTCGGACTCGTTGACCAGCGAGGACTTGATGTCGGCCAGGTCGCCCTCTTCCTCGGGGTGGCTGATCTCGGCGAAGATCTTCTCCTTCTGGGGGTCCCCTTCGTCCTTGAAGGGGATCATCTCGTCGGTGGCGCAGAGCTCCGGGTcccccccgccgcccccggccccc---ggcAGCTGCGGCATCCTCGCGGCAGCGCGGCGTCTGCTGCGGCCGCCGGCCCGCCGCgggaa---------gggagcgggaggagcggcggggga----agaggcgagggaggaggcgagag ...:....:x......---......-------..x..--...x:.x.::.::...x...---------------......:.x..-----------------......-...........:...::.xx.x.x..x::...:..:........x....:x..:...........:..:.::.....:..:..:.....:..:....................:........:..:..x..:..........................x...........:....................x..:x.:..:---.:x..:..x.......:x.....------------x...::::.x...x:....:.:....:---------::x...:...::::.:.x....x.----.::..:.:.......::x..... 16M3I6M7I5M2D20M15D11M17D6M1D201M3D23M12I27M9D24M4D23M 276/362 76.2% 384/94230402 0.0% 73/362 20.2% 53136617 NA +12173 chr4 + 190214555 108173293 108173292 108173581 289 CCGCTCGCGCGCTCGAGCCGTGCCT--TATATCGGCTGAGGGAGGCGCCTGCGCACGGCCCCGCGCGGCGGCGCGGCCTTTGAAGTCGCGGCGGCTGCCGCTTTCATCCTTTCTTTTTTC-CCTCGCAGGCCCCTTTGTGTGACTAAATTTGGCAAGAATATGGATCTGAGCCAGTCTTTCCACGTGTGCTCCCAGCTCCCAGCTGAGAAGGCCAAGGGTTCTCTTCCGGGTAAGGAGACAGGGAGAAAGATCAAAGAGTTTGGGGAGCTGGATCTGAAATGTGAATTGAAA chr4 - 94230402 55032968 55032967 55033246 39197157 39197156 39197435 279 CCGGTTGCGTGCG-GAGCGGCGCCCCCTATATAGG-GGAgggcgg-------gagcggggcggggcggcggcgc----TTTGATGTCCCGCCGGCGGCCCCTTTCATCCCCCCCCCGTCGGCCCCCCCGGGCCCTTTGTGCGCCTAAATTTGGCAGGAGCATGGAGGCGCGCCAGGGCGCCCACGTGTGCGCCGAGCTCCCAGCTGAGCCGGCCCCGGGTTTTCTTCCGGGTAAGGAGACAGCGGGGGAGATCAAAGAGTTTGGGGAGCCGAAGCCGAAATGTGCATGGAAA ...x.:...:..x-....x.:...:--.....x..-x.....x..-------.x:...xx.x.x..........----.....x...x..x....x...x.........:::.:::x.:x-..:.x.x..x.........:.x............:..::.....xx:.x.....xx:x:..........x..x..............xx....xx.....:....................x.:.::.....................:.:.x.:........x..x.... 13M1D11M2I8M1D9M7D22M4D42M1I171M 211/276 76.4% 279/94230402 0.0% 16/276 5.8% 53140325 NA +6968 chr4 + 190214555 108173470 108173469 108173581 112 CCACGTGTGCTCCCAGCTCCCAGCTGAGAAGGCCAA-GGGTTCTCTTCCGGGTAAGGAGACAGGGAGAAAGATCAAAGAGTTTGGGGAGCTGGATCTGAAATGTGAATTGAAA chr4 - 94230402 55035083 55035082 55035195 39195208 39195207 39195320 113 CCACGTGTGCGCCGAGCTCCCAGCTGAGCCGTTCAACGGGTTTTCTTCCGGGTAAGGAGACAGCGGGGGAGCTCAAAGAGTTTGGGGAGCCGAAGCCGAAATGTGCATGTAAA ..........x..x..............xx.x:...-.....:....................x.:.::..x..................:.:.x.:........x..xx... 36M1I76M 93/112 83.0% 113/94230402 0.0% 1/112 0.9% 53138387 NA +3900 chr4 + 190214555 108177284 108177283 108177350 67 GCTCCCAGGTTCAAGTGATTCTCGTGCCTCAGCCTCCCAAGTAGTTGGAACTACAGGTGTGCACCAC chr4 - 94230402 18197138 18197137 18197202 76033201 76033200 76033265 65 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...:.::..........x...x.:x.x........::.......:..........--:......... 55M2D10M 53/65 81.5% 65/94230402 0.0% 2/65 3.1% 89980146 NA +4315 chr4 + 190214555 108180546 108180545 108180701 156 GAAGGAAGAAGGAGAAAAAAATGGAAGAGAAGAGGAAGAGGAGGAGTAAG--AGGAGAAGAGGAAGAAGAAGGAGAAGAAAACAAGGAGGAAGAGAAAGAATAAGGAGAAAAGGAAGAGGAGAAGAGGAAGAAGAAAAAGGAAGAGGAAAAGAGAAAA chr4 - 94230402 44053988 44053987 44054137 50176266 50176265 50176415 150 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACA---AAGAACAGAAAGAACAATGC-AAAAGTGGGCGGATAA----AGGAAGAAAGGAGAGCAGTGAGACAGAAAA ....:.x.:........:...x.:.:....x:..:..:x..:.::..::.--xx..::.:..:.......x::.:.x...x...---.:...x........:..x.x-.....x::.x...x..----.:.......:::..:x..x:.:.x...... 50M2I32M3D20M1D16M4D30M 99/148 66.9% 150/94230402 0.0% 10/148 6.8% 64126558 NA +3834 chr4 + 190214555 108180597 108180596 108180731 135 GGAGAAGAGGAAGAAGAAGGAG--AAGAAAACAAGGAGGAAGAGAAAGAATAAGGAGAAAAGGAAGAGGAGAAGAGGAAGAAGAAAAAGGAAGAGGAAAAG------AGAAAAAGAAAGGAGGAGGAGGGAAGAGAAGGAAGA chr4 - 94230402 44053995 44053994 44054137 50176266 50176265 50176408 143 GGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ....:...:::.:.........--.......:::.....x:.:xxxx...x..:..:.:...:x.:.::x...x.x:.....x.:....:.x:.x.x...:------:..x....:...:.:.::...x::x....x:...:. 22M2I77M6I36M 85/135 63.0% 143/94230402 0.0% 8/135 5.9% 64126602 NA +4110 chr4 + 190214555 108180762 108180761 108180919 158 GAGATGAAGAGGAAGAGGAAAAGAAGAGGGAAGAGAAGGAAGAAGGAGAAAAAGAGAAAGAAGAAAGAGGAAGAGAAGAGGAAGAGAAGGAGTAAG------------AGGAGAAGAGGAAGA-AGGAGAAGAAAACGAG--GAGCAGGGAAGAGAAGGAAGAAGGAGAAAAA chr4 - 94230402 60992648 60992647 60992820 33237583 33237582 33237755 173 GAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGGGGAAAGGAGAGACGGATAAA ....::...x:...x.:...x..:.:.......:....x:.:..:.x...::.:.x..:.x....::.x::.xx:....x:...:::.::.x.x..------------::....x...::...-....xx.....x:...--::......x:.:...:.:...::x:..x... 96M12I15M1I16M2I31M 99/158 62.7% 173/94230402 0.0% 15/158 9.5% 47188114 NA +4349 chr4 + 190214555 108198149 108198148 108198318 170 ATAGTATGATTTGGTTCAGTGGTTAAAAAAGAGCATGCAGTCTTAAAAATCTGTGTTCAAATCCTAGCTCATATACTGACCAGCT--ATGTAATCTTGGGCAAATTCCTTAATGTCTCTGAGCTTCAGTTTTGTCTCCTGTAGAATGGAAT---AATAATAGAAACTTC-CAGAGA chr4 - 94230402 10384269 10384268 10384431 83845972 83845971 83846134 163 ATTGCATGTTATTGTTAAAAAAAAAAAAAAAAGCAC-----CATAA----CTGAGTTCTATTCCTGGCTCA---ACC-ACCAGCTCAATATGACCTTGGGCAAGACGCTTAGTTTCTTTGAGCTTCAGTTTGTACAGCTGTAGAATTGAGTAAAAAAAATTAAAACTTCACAGAGA ..x.:...x.x.x...x.:x::xx......:....:-----.x...----...x....x.x....:.....---..:-.......--..:.:.:.........:x:x....:.x...:.............xxx.xx.........x..:.---..x...x:.......-...... 36M5D5M4D21M3D3M1D7M2I64M3I15M1I6M 117/157 74.5% 163/94230402 0.0% 19/157 12.1% 97813880 92400675 +10134 chr4 + 190214555 108200284 108200283 108200480 197 ATTTTACTTGGAGTGATATATTTCTT------GGGTTAATTTATATTTTATAAATATATGAAAT-------TATTAATTCATTCTATCTGTAGCATGTGTGGACCCTGAAGCTTATGGCAGTGCCGTTATCTGTTGTAGGGATGCAAACATGCTCTTTGATGTGTTATTCTTGGGGACTTGGGAGGATAAAGATGGAATACTCATTTGGC chr4 - 94230402 55043555 55043554 55043758 39186645 39186644 39186848 204 ATTTCACCTGAAGTTGGATTTTTTTTTCTCCAGGCTTGACTTAG--TTTATAAATATGTGAGATAGGAGATTGGTAATTCAGTTTAT----AGTTTGTATGAACCCTGAAGCTTATGTCAATGCTGTTATCTATTATAGAAATGCAAACATGCTCTTTGATGTGTTATTCTCAGTGACTTGGGAGGATAAAGACGGAATACTCTATGGGC ....:..:..:...x:x..x...:..------..x..:.:...x--...........:...:..-------.:x.......x.:...----..:x...:..:...............x..:...:.......:..:...::..............................::.x..................:.........xx.x... 26M6I12M2D18M7I16M4D119M 155/191 81.2% 204/94230402 0.0% 19/191 9.9% 53156729 NA +10134 chr4 + 190214555 108200284 108200283 108200480 197 ATTTTACTTGGAGTGATATATTTCTT------GGGTTAATTTATATTTTATAAATATATGAAAT-------TATTAATTCATTCTATCTGTAGCATGTGTGGACCCTGAAGCTTATGGCAGTGCCGTTATCTGTTGTAGGGATGCAAACATGCTCTTTGATGTGTTATTCTTGGGGACTTGGGAGGATAAAGATGGAATACTCATTTGGC chr4 - 94230402 55017460 55017459 55017663 39212740 39212739 39212943 204 ATTTCACCTGAAGTTGGATTTTTTTTTCTCCAGGCTTGACTTAG--TTTATAAATATGTGAGATAGGAGATTGGTAATTCAGTTTAT----AGTTTGTATGAACCCTGAAGCTTATGTCAATGCTGTTATCTATTATAGAAATGCAAACATGCTCTTTGATGTGTTATTCTCAGTGACTTGGGAGGATAAAGACGGAATACTCTATGGGC ....:..:..:...x:x..x...:..------..x..:.:...x--...........:...:..-------.:x.......x.:...----..:x...:..:...............x..:...:.......:..:...::..............................::.x..................:.........xx.x... 26M6I12M2D18M7I16M4D119M 155/191 81.2% 204/94230402 0.0% 19/191 9.9% 53182824 NA +19128 chr4 + 190214555 108211454 108211453 108212155 702 AAGGCAACTGCACTTGCTATGTCAAACACATAAAACAGATTCTTTCTGCCAAAACTCTCCGGGTAATGGTAATTAAATAGATGTTTGGTTACTCCTATCCTATATTCTGCACTAAGTTGATTAACCTGTTTAATGAGTATATGAGAATGACCAAAGCTGACCTCACATCAAAGAGCCCCATTGTTGCTGTGTGCTGACCTGAATTTTAGTTGTGCACTAGGTTCTTTAATTGCACCAGGGATGTGCTAGAGAATAGAGTAGATATTTTAAGCGGCAGTGGGTTTCTTGTCCCAGATGTGTTCAGTTACTTGTAACATGCAGTATTAGATGCTGATTTGCACATCCAGGC-TCTGAACACTCTCCATCTTTGCAAAGATTCGCAGTTTAACAGTTATGTTTGTTGC--AATTGGCAGTGGTG------ATTAGTTCATATGGTAAAACTTACCTTCATGTATTATTAAACATCACAAAGGAGTTGAGAAAAAAAGAGTCTGTAAATGAGTCAACAGTGAATAAATTCAGATCTAAACAGTCTTTG-GGTCTCCATTAAGGCCTCCCACCTTGGTCTTCAGCCTCCATGAGAATCCTTAAAGGCTGATGTGTTTTCTTTATTGAGCACTGTCAGCAAGGACCAATTGTTACTTCAATCTACAAGTA--CCAGGTGGTAGACAATAGGAAGCTAGTTCTTAAGTGATAACATTGATT chr4 - 94230402 55046824 55046823 55047526 39182877 39182876 39183579 703 AAAGAAATAGTATTTG-TGTATCGACTGAGTAAAATAG--CCTGCTTGCCAACGCCCTCAGAGCAACAGTAATTACATGGATTTTTGGTCAGTCCTGTCATAGTTACTCCACTAAGTTGATTAACCTATATAATGAGTACAGGACTGTGACCAATACTGACCCCACATCAAAGGATGGTATTGCTGCTGTGTGCTGACCTGAATTTTAATTGTTCTCTAAGTTTTGTAATTAAACCACAGATGTGCTAAAGAAGAGATTAGGCATTTTAGCTGGCAGTGTATGCATTTTCCCAGATGTG-TCAATTGTGTATACTATAAAATGTCAGATGCCCGCCTCAATACGCAAATATCTAATGACACGCCA-CTTCGCAGATACCTAAAGCCTCTCTCTTTCTTTTCCTTCATATCTTAAAGTGGGGAACAAAATTAATTTATATGCTAAAACTCTTCTATATACATTACTGTGTGTCACCATGGCTCTTGCATAAA---GTTATATAAATAAATCAACAATGAATAAATTAGAACTTCAAGTGTCTGTGAAGTTCCCAT--AGGTTTATACACTTGGTCCTCAGAGTCCAAAAACGCTACTGCAGACAGATGTTTTTCCCTTCTTCAGGATCATCAGAGTGGTGCATCTGTTGCTTCAGCCAGTGGCTATGCCAGACTCGAGAGAA-AACACGTTGCTCCTTAAATGAAGACAACTATT ..:.x..:x.:.:...-.:.:..:.x::x:.....:..--:..x::......x:.:...x.:.:..::.......x..:...x......:.x....:..x..xx.x..x..................:.x.........:.x..xx:.......x:......:..........:::xx:....:........................:....x.x...:...:.x.....:x....x:.........:....x...x...::......:x:.......x:.x:x..x...........-...:..::x.:..x:..:x.:.:.:......:x:::.xx.:.:x..:::-...:.xx..x.x...-...:...:.x.::::x..::.xx.xx..x:x...x:.x.--.x:.x:x.....x.------....:..:.....x.......:x:..x:..::....:.:x:::....x.x..xx:.x:x.x...---:x.x.:.....:.:......:..........x::.::.x..xx....x..-:..::....--...::.x:xxx.......:....xx....x:.:x:::x:.:x..:.x.....x...:.:..x..x..x.:::....x:x..xx..x:....:.....::.x::::x..--....::xxx...x..-.:x.x.:.:x.:.....:...x:...x:x... 16M1D21M2D259M1D49M1I15M1D39M2I14M6I64M3D50M1I9M2D108M2I15M1D32M 445/691 64.4% 703/94230402 0.0% 23/691 3.3% 53164630 NA +26006 chr4 + 190214555 108218599 108218598 108219024 426 TAAACAAGTTTATTTAAATATAATTCAGCATATTCTCCTCGAAAACATTGAATTCCCAAACAGAATAATAAGTTTAAAATTAATGTGGTTTATTAACAATTAAAAATGATAACACAAGCTGAAGAAGATTGGAGGTGAAATGTTGAGTTTCCTTTGATAGGTAGAGTAATTACAAAGTGTGCTTTTGAAGTTCAAGAAGACAGCCTTAGGACACAACATTTTT-AAAGTAAAAATTGGCTTGCACTCTGTTCAAGTGATTTATTTTGCACTAAGAAATGGGTGTGAGACATGATGTGATTTAAAATTTCATCCCTTGATGGAACTGCTTGAGGGTGACATGAATTTTTTT----CTTTTTTCTTTTC---------TCAGCCTGCTCGGCCTATGAAGTTTCCTATCTAAAAGTTAATCTTCTGAAATTACTTAGGAATG chr4 - 94230402 55053489 55053488 55053923 39176480 39176479 39176914 435 taaatatgttaatttaaa-ataaCTTCGCGTATTCATTTGAAAGATGT--AATTTCAAGAGAGAATAACCAGtttaaaattaatataatttattaacaattaaaaattataaCACAAGCGGAGGGAGGTTGGAGGTGAAATATTGAGTTTCCTTTGATAGGTAGAGTAATTATGAAGTATGCTTTTGAAGTTCAAGAAGAGAGCCTTAGGACACAACATTTTTTAAAGAAAAAATTGGCTTGCACTCTCTTCAAGTGATTTATTTTGCACTAAGAAATGGGTGTGAGACATGATGTGATTTAAAATGTCATCCCTTGATGGAACTGCTTGAGGGTGACATCATTTTTTTTTCCCCCTCTCTCTTTTTATTTATATATTTGGCTTCTTGATTTCTGAAGTTCTCTATCTTAGGG--AATCTAACAAAATTAAGTTGAAATG ....:.x...x.......-....:.:x..:.....x::.x:..:.::.--....:.x.:.x.......:x..............:.::...................x...........x..:.:..:.............:..............................::....:.....................x......................-....x...................x.........................................................x.................................x.x.......----.:.:.:......:---------.:x.x..x..:.:::.x.......::......x.::.--.....xx::......xx.x.:.... 18M1D29M2D173M1I126M4I13M9I37M2D25M 356/421 84.6% 435/94230402 0.0% 19/421 4.5% 53165110 NA +26297 chr4 + 190214555 108218599 108218598 108219085 487 TAAACAAGTTTATTTAAATATAATTCAGCATATTCTCCTCGAAAACATTGAATTCCCAAACAGAATAATAAGTTTAAAATTAATGTGGTTTATTAACAATTAAAAATGATAACACAAGCTGAAGAAGATTGGAGGTGAAATGTTGAGTTTCCTTTGATAGGTAGAGTAATTACAAAGTGTGCTTTTGAAGTTCAAGAAGACAGCCTTAGGACACAACATTTTT-AAAGTAAAAATTGGCTTGCACTCTGTTCAAGTGATTTATTTTGCACTAAGAAATGGGTGTGAGACATGATGTGATTTAAAATTTCATCCCTTGATGGAACTGCTTGAGGGTGACATGAATTTTTTT---CTTTTTTCTTTTC---------TCAGCCTGCTCGGCCTATGAAGTTTCCTATCTAAAAGTTAATCTTCTGAAATTACTTAGGAATGTAAGGAAACCTAATCTTTTGGTGTGTAAACAAAAAGGACTAAGTATATCACTCCCCCTCTG chr4 - 94230402 55049293 55049292 55049773 39180630 39180629 39181110 481 taaatatgttaatttaaa-ataaCTTCGCGTATTCATTT--GAAAGATGGAATTTCAAGAGAGAATAACCAGtttaaaattaatataatttattaacaattaaaaattataaCACAAGCGGAGGGAGGTTGGAGGTGAAATATTGAGTTTCCTTTGATAGGTAGAGTAATTATGAAGTATGCTTTTGAAGTTCAAGAAGAGAGCCTTAGGACACAACATTTTTTAAAGAAAAAATTGGCTTGCACTCTCTTCAAGTGATTTATTTTGCACTAAGAAATGGGTGTGAGACATGATGTGATTTAAAATGTCATCCCTTGATGGAACTGCTTGAGGGTGACATCATTTTTTTTCCCCCTCTCTCTTTTTATTTATATATTTGGCTTCTTGATTTCTGAAGTTCTCTATCTTAGGG--AATCTAACAAAATTAAGTTGAAATGaataataattaaa-------------aaaaaaaaaaaaGCAAGCA-ATCAACACCTCTCCG ....:.x...x.......-....:.:x..:.....x::.--:...x..x.....:.x.:.x.......:x..............:.::...................x...........x..:.:..:.............:..............................::....:.....................x......................-....x...................x.........................................................x.................................x.x.......---.:.:.:......:---------.:x.x..x..:.:::.x.......::......x.::.--.....xx::......xx.x.:....x.x::x..::x..-------------...x.....::.x:...:.-....x:x..:...:. 18M1D20M2D182M1I126M3I13M9I37M2D38M13D19M1D15M 386/468 82.5% 481/94230402 0.0% 32/468 6.8% 53169306 NA +3225 chr4 + 190214555 108228592 108228591 108228752 161 AAGTTGTATGAGTATTTTTTTCATAAATTTTGGGTATTAACCATATATGTATATA---TATGTATATGTATATAATATATATATA-TCTTGAAAAT------ATTGTTTCCA-------ATTTGTAGTTTGTCTTTTTATTTTGTTGATTCTTTTGCTGTGTAATTAATGTTTCTTTT chr4 - 94230402 66484656 66484655 66484819 27745584 27745583 27745747 164 AAGCTGTATAAGCA-----------AATTTTG---AATCATTGTATCTCTATATAATGTTTACAGATGGACATGAAACACAGATGGTCATAAAGAGCTGCTGATTTTTTCTGCTTGTGTGTTTGTAATATGTCTTTGTGTTTTGTTGGTTCTTTTTCCATGCACTTAGTGCATTTCTT ...:.....:..:.-----------.......---.x.x.:::...x.x......---.x.::.x...x.:..:.x.:.:.x..:-..x.:..:.x------...x....::-------:......:.x.......x.:........:.......x.::..:.x...:..:x.:.:.. 14M11D7M3D20M3I27M1I10M6I10M7I59M 102/147 69.4% 164/94230402 0.0% 31/147 21.1% 41743936 NA +3358 chr4 + 190214555 108229468 108229467 108229656 189 CTGCAGCCTCAACCTCCCAGGCTGAATCAATCCTCTCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACGCC-----ACCACGCTCGCCTAATTTTGTATTTTTTGTAAAGACAGGGTTTT-GCCCTGGCTGGCCTCAAACTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCTTCCCAAAGTGCTGAGAT chr4 - 94230402 18197126 18197125 18197320 76033083 76033082 76033277 195 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCCTTTCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCCTTCTGCCCTCCTCTTTCAGTCTACTTCCTCAAATCAGGTTCCCAATGTCCTCAAAT ..:.....:x..x..:.::..:.x..x::x.:.x.xx:x........::::.........:......x......xx.-----.:..:x..:x.x.:.:x..::..x:...x:x..:x....x:::.-::.:.x:...x.:..x:x.::.:xxx:...:x.x.::::.:::xx....x.......x..x..x.:.. 77M5I44M1I68M 106/189 56.1% 195/94230402 0.0% 6/189 3.2% 90032342 NA +15277 chr4 + 190214555 108261068 108261067 108261340 273 CCACTGTGGAAAAGTTTAGGTAGAAATATATCT---GTG-TATCTA----TATCATGCATTTTTTTGTGAAAAGGGTAATGGAATACAGAATGCCATACATGGGTTATTCCCACTATGAATTAGTCTCTTTTATCTGACTCTGACCAAAACAGATGTTGGCAGCCTTTCTATTCCATCTCCCTAAGTCAGACTAAGACTATCAGTTCCGCTTAGGGAAGCTGTAGGGAAATGATTTAACTCTTTCAATAGACCCTTACTAATTTTTCCCTTGGTTCCTTTT chr4 - 94230402 55059634 55059633 55059914 39170489 39170488 39170769 281 CTACAGTGAAGAAGTTTAGGTGAGCCTCAATCTTCCGTACTATCGAATGCTATTTTGCGTGCTTTTATGAAGAGGGTAATGCAACACAGAATGCTGTACATGGGTTCTTCCAGCTCTGAATTAGTCTCTTTTATCTGTCTCTGACCACAACAGATGTTGGCAGCCTTTCTATTCCATATCCTTAAGTCAGACTAAGAATATCAGTTCCGCTTAGGGAAGCTCTAGGGGAAAAGTTTAACCCTTTCAGGAGGCTTTTCCTTGTTTTCTTTTTTCTTTTCTTT .:..x...:.:..........:::xx.xx....---..:-....x.----...:x...:.x:....:....:.........x..:.........::..........x....x:..x.....................x.........x.............................x...:...............x.......................x.....:..x::......:......:x..:.::..x..x:....::::..xx..:::... 33M3I3M1I6M4I231M 217/273 79.5% 281/94230402 0.0% 8/273 2.9% 53201434 NA +8241 chr4 + 190214555 108271314 108271313 108271552 239 ATATGTAACTTATTAAATGTCTTCAAGAAAAGGGAGATGTAAGGAACTAATTTTATTGACTGACATGGACTGCAGAGACACACAGAGCCTGCTCACATCTTTTGTAAAGTTTGGATTCAGAGACACTCCCCAACCCCCACTCCTAATGTAGGA-AGAGACGCCATCACACATGTTTATTGACTGGTAGA-TGCAAGGATCTGTCGGCCATATGCATGCAAGTGAAACAACATTGACCTTGA chr4 - 94230402 55060711 55060710 55060949 39169454 39169453 39169692 239 ATGTCTAGCTAGTTACATGTCTTCAAGTGAGAGG-GCTGTAAGGATCTAATTTTACTGACTGACAAGGATTGCAGAAGCATACACAGCCTGCTCATATCCTTTGTGGAG-TTGGAAGCAGAGCCACCTTTTCATTTCTTTTTTTTCCACTGCACAGAGACGCCATCACATATGTTCTGAGGCTGATGAACTGAAGAGATCTGGGAGCCACATGTGACCAGCAGAATGAGCACCAGCCTAGA ..:.x..:..x:...x...........x:.::..-.x........x.........:.........x...:......::..:...x..........:...:.....::..-.....xx.....x...:::::x.:::.:x:.::.xx:::x.x.-...............:.....:xxx.:...:.::.-..x.::......xx:....:...::xx..:xx...xx.:..::::...x.. 34M1D74M1D43M1I35M1I51M 159/237 67.1% 239/94230402 0.0% 4/237 1.7% 53210603 NA +7474 chr4 + 190214555 108272793 108272792 108272964 172 TTAGTAAATGTTGTAGGATAATTGATGGTTGTATCTTTTTTCTTGTTTCTTGTGGTATTGTGGTCTTCTCCCTTAAAGGATAGTCATCCTTTTAAGTGGGATACAACAACCTTCCTCA-AAGGTTGGAAGTCAAAACTGAGCCAA-AATGACTTTGAAATGATATTTAATTTAA chr4 - 94230402 55066477 55066476 55066649 39163754 39163753 39163926 173 TTGGTGAGTGTTGTCTAATCAGTGATAGTCAGAGGGTTTCT-TAGTCACTTGTGGTAATGTGGTCTTCCTCTTTGCAGGATTATCAGTCTTTTAAGTGGGATCCAACAACTTTCCTCAGAAGAGTGGAATACTAGATTCAGCCAAGAAATACTTTGAAATGATATTTAACCTAA ..:..:.:......xx:..x.x....:..::x.xxx...:.-.x..:x.........x..........::.:..:x.....x:...x:..............x.......:.......-...:x.....xx.x.:.:.x......-..xx...................::... 41M1D76M1I26M1I28M 128/171 74.9% 173/94230402 0.0% 3/171 1.8% 53206316 NA +7474 chr4 + 190214555 108272793 108272792 108272964 172 TTAGTAAATGTTGTAGGATAATTGATGGTTGTATCTTTTTTCTTGTTTCTTGTGGTATTGTGGTCTTCTCCCTTAAAGGATAGTCATCCTTTTAAGTGGGATACAACAACCTTCCTCA-AAGGTTGGAAGTCAAAACTGAGCCAA-AATGACTTTGAAATGATATTTAATTTAA chr4 - 94230402 55063295 55063294 55063467 39166936 39166935 39167108 173 TTGGTGAGTGTTGTCTAATCAGTGATAGTCAGAGGGTTTCT-TAGTCACTTGTGGTAATGTGGTCTTCCTCTTTGCAGGATTATCAGTCTTTTAAGTGGGATCCAACAACTTTCCTCAGAAGAGTGGAATACTAGATTCAGCCAAGAAATACTTTGAAATGATATTTAACCTAA ..:..:.:......xx:..x.x....:..::x.xxx...:.-.x..:x.........x..........::.:..:x.....x:...x:..............x.......:.......-...:x.....xx.x.:.:.x......-..xx...................::... 41M1D76M1I26M1I28M 128/171 74.9% 173/94230402 0.0% 3/171 1.8% 53209498 NA +3076 chr4 + 190214555 108275898 108275897 108275962 65 TCTCTCTATATATATATATATATATATATATACACATTTTATTTATTTATTTATTTGTTTATTTT chr4 - 94230402 3915973 3915972 3916037 90314366 90314365 90314430 65 TCTATCTGTATATATATAAATATATTTACACACACAAACTATACATTTGTTTCTCTTCTTATATT ...x...:..........x......x..:.:.....xx:...x:....:...x.:.x:....x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 104359925 85854630 +3009 chr4 + 190214555 108275905 108275904 108275957 53 ATATATATATATATATATATATATACACATTTTATTTATTTATTTATTTGTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:.....:.:.....x.:.....x...x.:..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 15540554 NA +4373 chr4 + 190214555 108292367 108292366 108292461 95 AATTATAGTGGTGCCAGCTTGTCTTACCTTTGTTAAATATGTGCCAACTGTTTCACAATGAACCTTTACTTTCCC--TTTTATGACTGGCTGTAAAA chr4 - 94230402 55078606 55078605 55078702 39151701 39151700 39151797 97 AATTACAGTGGCGCCAGTTTGTCCCACGTTCATAATAGTTGTGCCAGCATTTTTACAATGAACCTTCATTATCTAAGTTTTATGTCTGTCCATAAAA .....:.....:.....:.....::..x..::.x.x.xx.......:.xx...:............:.:.x..:x--.......x...x.::..... 75M2I20M 70/95 73.7% 97/94230402 0.0% 2/95 2.1% 53213761 NA +14863 chr4 + 190214555 108312463 108312462 108313026 564 TTGTGAAGGTAAGAAGAACCAAATTGTTCA------AGCCTATAATGTGAGTATAG-----TTTAAGATATATGCCCTTACTATTAGAGCTTAAAGCCAGAATGTCATAGACCAAACTCATAATATAGTTTATGGCTGATCTTTATGGTAATAAAAAAATC-------TAGAAAGAAACTGCCTGGCACCATTTGCTGAAGATGTTTTT----TAATACTGTCAAGTGATTCATAATTATAAAGGGTGAATGGACTATGTTTGCTCTGTAGTGGTTATGCTGAGACTCATTAAGTACTTTCTGCATCCAGGAGTTCTGTTTTATGTAAACAAGACCTCTGAGGAATATATAGATGGGTAATAAAGATGAAAGGAAATGAAGTATATTAACATGAGGACAAATTAATAACGGCCTTTCCATCTTCT----------------------------AACAGGAAAATCAGTTGCTGTGGAATAATTGCACTTTTCAATGCA-----AAGGGGAGCAAAAATCCAGACAAAGCAATAGACAGAAGACAGACAAAATCAGACAGGGCTCTGGGGTCAAACTACTT---TATGGAGATAGTCTGCACTTTGGAAAACTTACCTGCTTT chr4 - 94230402 55093353 55093352 55093952 39136451 39136450 39137050 600 TTCTAGATGTAGGAAGGAACCACTCACTGATCCTGGAGCATGAAATATGAGCACAGCTGTTTTTTTTTTTTTTCTTCCTACTGCTTCTGCTTGGAGCCAAAGCAACACTGTCCTAACTCATGAA-----TTATGATTGTTCTTTATAGCAATAAATAAATAATAAAAGTAAATAGAAGCTTTCTGGCACAACTTGCTGAAGTTTTCTTTCTCTTAATGCAGTCAAATGATTCATAATTAGAAAGAGT-AGCGTACTTTGCTCACTCTGTTCTGGTTATACAGAAACTCATTAAGCACC--ATGCATCCAAGTGCACTGTTTTATGTAAACAAGACCTCTGAGAGAGATATAGATGTCTGATAAAGATGAAAAGAA---AAACAGACTAATACCAGGCCACATAAATAATGACCATGTCATGTTCTTaaaaaagaaagaaagaaagaaagaaagaaagaaaAAGTCATCTGCTGTGCAGTCATTACACATTTCACAGCATGATGAGGGCAAGGTAAAGACCAGA-AATGTAGTCAA-AAAGGACAGCCATA---------GGTTTCAGATTCAAATGATTTAACTGCAGCTACATTTGAAACTTTGCACGATTTTTCTTCCTT ..x.::.x...:....:.x.x.x.:::.x.------...x.:x...:....:.:..-----...xxxx.x.x.x::.:....::.xxx....::.....:.:::x..:x.x..x.......:.x-----.....::..x.......:.:......x....x-------..:.x....:..x:.......x.:.........x.x.:...----....:.x.....:.............x....:..-.::.x...x..:.::......xx.......:.x..:..........:..:--x........:.x.:x...........................::.x.........xx.:............:...---..::.x.:...:.:x...x..x..x.....:.:..x.x:...x....----------------------------..x:::...:...x:.......x.:.x...:...x.....xx...-----.:..x:..xx...:x.....-..x.:.:.x:.-.:.:.....x..x.---------..:.:::.:x.....:x.:..---.:::.xx.:.x.:x:x......x.x:.:..x:..x.:.. 30M6I20M5I63M5D32M7I41M4I34M1D50M2D75M3D47M28I45M5I20M1D11M1D14M9D21M3I39M 373/542 68.8% 600/94230402 0.0% 80/542 14.8% 53219110 NA +3688 chr4 + 190214555 108316401 108316400 108316469 69 TCATTAGCTGTGTGACCTTGGGCGAGTTACTTAATCTTTCTGAATCTTGGTTTTCTCAACTGTAAAATG chr4 - 94230402 11947208 11947207 11947276 82283127 82283126 82283195 69 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG ...:..:............:..:x...:.........x:...x:..:::....:.:..xx.:.:..... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 96369193 93845362 +71529 chr4 + 190214555 108333369 108333368 108335810 2442 TTTCCCCAACAAAACATAAATCTGAACAAATGAATCTTACAGAATCACTGGTGCTGGGGAGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTG-GTGCCTGGTAGGGTTATTT--CCCATCTTCCAAAGCCTAAGCCCTAATGAGCTCCAGGGGGACAGAAGTCTGTCAATCACAGGGTACTTTTCAAGTA-TAGTCATCTCTGCCCCATCAGAGAACCACGAGGCATGAAATAATTAGAAAGCCCAGAATAACTGCTCTGTTTTACAAGAGCAAAATCCGTATGTGGATCATTTACATAAACTTGTCACTTCCCATTACAGTTCTAATGTCGGCTGGGTAGTAATCGCAGGCATGCTGGGGGAGGGGAGGTCAAGGTAGGCTGCGCCTCCATACTGGAAGCCTAAGGTACGCATGTGCTGTGCCTGTCACCACCCCCACCTGCACTGCCTACTGAATTAATGGAAAGTATCTTTTCTTTTCCATTAAATAAGAACTATTCATGCTGCTATGGCAGCAGACCCTGTG------------CTTAAGAGAGAGAAAAAAAGCGCTTTTGCATCAAGCTATTGTTGGGGGAGAATTCACTTTGAGGAGTATTTCAAAGCTGATCCGATTGGGGAAAGAATCATGTTAAATATTTGCTATGAAATATTTATAAGAAGAGCACAGGAGCAATTGACAAAGTTGCCTGGGAAAATAATCATTTCTCCTCAT-TTGGACATTTTAGGTTGGGGGGTTTAAATGCCCTACGGAGAACTTATATAA---GTGCAAATA-CATGTGTGATGTGTGTTCACAAATG--------CGCGTGTGCATACACACATACAAGCACACTCAC------ACACATGGTTGAATGGATTGATAGGATTTAAGCCAATCTGCATCTGAATGCTATTTCCCAAATACGGCAGCAATAAGAGGTCACTGAGGACTCTCTTGATAATTGTGTTTGAAGAAGCCCTGTGCTGATGCCGGCAGAGCAGGGCGCCT-TAGCTGTACCCAGGCAGCCATGGCCATGTGGCAGGCAGCCATCTTACAGGTGCTTTTTATA--TACCACA--------------------CCCTAAGAAAGGGA------CTCTTGAAGG-GGACAGACTCCCCTCA-----ACCCTACCCTTTATTC-CATCAGTTTGATACCCGGGTGTATGCATTGAGA---AAGGAAAAGGATGATTTGTTTGAAGCCAGAATAAATGTTAT------------------------------CAGAGTACAG--------TGTTGCCATCTATGTGGCTTGTGGGTTAAAAAGAAATTAGC-----ACCGAAACCCTGCCCACCTGA----ATATACA---ATTATGTAA--------------------------TAAAATGTGGCAGATG--ATTTATTGACTTATATGGTTAAAAGAA-------GGTCTGTATCAACTGTATATAATTTCAATATC----------------TGTGGGGCTCTTCTCTGTATCAGGAAGAGAGAAATGAAAATATTCTGTTTTCATGCAATGTGTCCAATAAAT------AAATCACATATTT---------AACTCAGTATTTGCCACATAAGCCTTGCAATCATTTTATGTAGTATTTTATACTACTGTGAAA-------CTAGTGT--ACTGTAGTGTGATTAGCATAAG--------------------------------CAACCAAAGAGCTAACTAGGTAGTGTATACCTTGTTA----CTGATGCTT--ATTTTAGCCTAGAAATT-CTATAGAGGATTTTGCTCTATGCCAGTTT----TATTAATCAAC--------AAGCACATAGGCTTCTGGCCAAAAGGGTGAGTGCTCTGAAATGTCCAGCTGCAGTCATCTCTATAGTATCCGACTTTGTCTGAGAGGACCAAGATCACCTAGCAGTGACGCAGGCAGAAGGAAGATGCACGGGCGTGGTGGGGGTC------TGAACCACAGCCAGG--CTGTTTCTTATCTAAGAGTTCACCAAGTGGGAAAGCATTGTGGATGGATTTAAATCAGCTTTTTTCTCCAACCCCCCTCCCTTGCACACAACAAAAGTCTAAATCCCTTTTCAGGCCAGATTGCCCCATTTCCCTGCATGGGCCAGGCAGATTGGAAACATGTTTGTCATTCAGCTTTTCT-CCGGGCTAATCAGGAGACACTGGGGTGGTGGGATT-------TCTGCCTTTCATCTATGGAGCCTGCCTCTAAAAACAGCCG-TGCAGAGGCCTCTAGGCCTGCTCGAGAGCTG-GGCTGCCTGTCATCTCTGCAGACAGATATAAAAATATTGTTAACCACGAGCCTAAGCAGAGGGTTTAACAGGGATTTGAATCTAAAATGTGATACTCCACATAGACCAACTTGATTTGGTCCAACAGAGCCGAACCCCTTATTCTGTTCTAACAAAGTGTGTCACATAATGGAGGAGATTTTGATGGGATTTACGACGTCTCTGTTTCAGGCCTGTTGCTGAATAGATGTAAACTGTGAATGAACGTAGCTGCCTCC-TGAGCTATCATGACAAGAG---GCCTTGGTCCATCTGACTG-ACGCATCAAGGTCTTATTGGAGGACA----------------GCTTTCAAGTTCACGGGGGTGCTCTCCCGAGCATGC-AGTGGCAGCTGTGCCAGGCAG chr4 - 94230402 55097824 55097823 55100418 39129985 39129984 39132579 2595 TTTCTCGACTAGTGTAAAAATCCCAATAAATGA-TCTAAAAGAACAACTGGCACTAGGGCAAGCATGTGTGTATGCGCCTGTGTGCATGTGGTGTGCCTGGTAGAGTTTTCTACCCCCTCTTGCAAAGCACAGGCCTTAATGAGTTCCAGGGGGACAGTGGCTTGTCAATCACAATATACTTTTCAAGTACTAGTCATCTCTGCCCCGTCACAGAACCACAAGGCATGAAATAATTAGAAAGCCCAGAGTAACTGCTCTGTTTTACAAGAGCAAAATCCTTGTGTGGATCATTTACATAAACTTGTCACTTCCCATTACGGTTCTAATGCAAGCTGGGTAATAATCATGGG---ACCAGAGGAGGGGAGGTCAAGGTATGATGCTCCTCCATGTTTGAAGCACAAGGTACGCATGTGCCCAGCTTTCCATCCCCC---------------ACTGAATTAATGTAAAGTATCTTTTATTTTCCATTAAATAAGAACTATTCATGCTGCTATGGTAGCAGACCATGTGCAGCCTCCTCTTCTTAAGAGAGAAAAAAA----GCTTTTGCGTCAAGCCATTGTTAGGGGAGAATTCACTTTGAGGAGCATTTCAAAGCTGATCCGATTGGGGAAGGAATAATGTTAAATATTTGGTATGAAATATTTATAAGACACACACACGAACATCTGACAAAGTAGCCT-GGAAAATACACATT----CTCATCTTTGACAATTTAGCTCTTTCTCTCTGAGCG------AGAGGATGGAGAGAAGGTGTGCACATAGTGAGCGTTGTATATATGGATAAATGCATCTAAACACATGCACACTTACACACAGAAACAGACACACTTGCGTACAAACGCTTGAATGGGTTGATGGGATTTAAGGCAATCTGCATCTGAATACTGCTCTCCAAATATGGCAGCAATAAGGGCTTGCAGAAGTCTGTTTTAATAATTGTGAAGGAGAAAGCTCTGTACTAATGCCTATCGCAAGGGGCATCTCTAGAGTAACAGAGGTGATTGCTGCTATTTTCCA-GCAACCATTTTGTTGGTGTTCTTCACAACTGTCATAAGGCATCATCTGCATTTCTGCCACAAGAAAACAAGCATCTGTCTTCAGTACGGGTTGATTTTCCACACGTGCATCCGTTCCTTCATTTGCTTTTATTTGAAA--AAAATGGACGCAATTAAAAATAAGGAAAGAACAGACTTGCTTATGGGCAACTAGAATTGTATTTTTAACCTTTTCTGCTCTTTCTGATGAAACAAGGCAAAATCTTTTTTTTTTTTTTTCCAAGGGGCTGCGAGGTTTCAGAAAAATGGGTTATCAACTCATTCTCAGTCCTTCCGACAAGAGATAAAGAGAGAATGTAATGGCTCTCTCCTTATGGCAGTCACACTGAAATGCACAGGATGGCATATATTAAATAACCAGAATAAAGGAAACCATGTGATCTGCTTTCTTTGTAAGGGGATCTAATAACCTCCTCCTAGAAATCTTACTTTGTTCTCCtttgtttt-------------------tttttttttttttttttgtgtgttttttattttttGCCACGTCTCTTCTTTGTCTGCCCCACTTCTACCTTTGCC---TACCCCACACAACAGCTGTGGGCTGT-TGTTATTCTCTGGTGAAATGTCTTCCTGGTGTAGACTGTAAACAAGTTGGAGCAAGACCTTTCTATCTGTCTGTAGAGATCCTTTTTACACATGCAGCGCTACATACGCACAG--TGCCATGTAATGGGCTGAGGATTCACTCTCACTTTAAAAATTGCCAGATCAAA---TGCCCCAGGCAGGCTCGACGCATTGTACAACATGTTTTTAAGTGAACAGGCTGCT---CAATAGAAAGACAGC---------ATCATTTGCCCTCATC-------TGCCAGCTTTTGTCTTTGAG-------------TGGAAGTGTGG---------------------GGCCTGGTGAGAGGCAGTATATGAACTGTGTCCAGACTCTGTTCCTTATCTCTGAGATCACCAAGAGGGAGAGCATTGTTGATGGATTTTAATCAGCTTTTT----------CCCCCCCTTGCGCACAACAAAAGTCTAAATCCCTTTTCAGGCCAGATTGCTCCATTTCGCTGCATGGGCCAGGCAGATTGGAAACATGTTTGTCACTCAGCCTTTCTCCCAACCTAATCAGTAGACACTGGGGTGGTGGTGCTCAGTGTATCACCCTTTAATCTATGGAGTCAGCCTTTAAAAGCTGCTGATGCTGTTGCTGCTATG------TGTGAGCTGTTTCTGTCTTTCATTTCTGAAGACAGATATAAAAATAATGTTAACCACAAGCATAAGCAGAGGGTTTAGCAGGGATTTGAATCTAAAATGGGATACTTAACACAGGGCAACTTGATTTGGTCCAACAGAGCTGAACCCCTTATTCTGTTACAATAAAGTGTGTCATAT-ATGGAGGAGATTGCAATGGGATTTACTGCCTCTGTGTTTTAGTTCTGCTGCTGAATAGGCCTAGATGGGGAATAACCATAA--GCCACAGTGAGCTGTGGCTGAAAAAGAGTGGCTCAGCAGACCTGACTGCAGGTTTCAAGGGTCTCTCTGGTAACACCACTAGCTCACCAATGCCCTTAGGTTTGCTGAGGCTTAGTCCATAGCATGCAAACTTCATCTGTGCCTGACAG ....:.x.x:.:x::.x.....:x..:......-...x.x....:x.....::..:...x:.::x:x.x.x.x.x:x::.x.x.x:x.x.x.-...........:...x.:.--...x....x......x:.:...:.......:.............x:.::...........:x:.............-................:...x........:...........................:..............................x.:.....................................:.........:x:........:.....:::..---:.::.:..................x.x...x.......::.x.....x:...............:xx..:.x:..:.x...---------------............x............x....................................:........x....------------...........:.....----........:......:......:......................:..........................:....x..............x..................x:x:....x..:..x:.........x....-........xx....----.....-..x....x.....x.:xxxxxx.:.:.::.------:...:.:xx.x.x..---.....x...-::x.:..x:.:.:.:.xx.:.....--------.:.:..::..:x:.....:.x..:..x..x...------...x.:.x........:.....:.........x................:..::.::.......:............:.x.::.x..:.x..x.:..:.........xxx..::....:....:..:.....x::x.x:x:....::..-...xxxx..xx...:::::::x..:..x.xx..-...:....:..::x....:.:..:.:.--.::..:.--------------------..x:......:x:.------x....x.:x:-..::x..:.::..x..-----.:..xx:....:...:-.x.:x:.....x.--x:::..x.:...x.x.:.---.......:::xx..:...:..:x:.x..:xxx:...xx...------------------------------..::.:.x.:--------.x..x::x..:.x.x....xxx:....xx.:.:....x:.:-----..:x.xx.:.x.:..x:.:..----.x...x.---.xx......--------------------------.:.....::xx:....--..x....:.x.x.:xx.:x....:...-------.:....:x.:xx:....x:x::x.::....x.----------------.::xxx.:...:..:...x.:-------------------.x..:.x....:x.x:x:.....::xx..xx.------.x:..x.x.x...---------.x:..x::x......---..xx..x::...:x::.x.:x.:x..-.x....x..x:x......-------..:....--......:xxx::..:.x::...--------------------------------..xx::x..x....xx..x.:.xx.--.:..x...x.----....x.x..--x.:.:.x::..:.....-.:.x.xx::.---...:.:.x..x:.:.:----:...:xx....--------...::x.:.....x..---...x..::x..xx..---------x:..x:...xx.....-------.::.x.x:.......xx...-------------.:.x....xx.---------------------...x.....:.:.x.------.....::::x....:--.....:.......xx...x........x....:........x.........x............----------...:.......:......................................:.......x....................................:.....:.....-..::x........x.................x::.-------..xx.....x..........:.x....:.....:.x..:.-...x.xx..:x...x.------:.x......-xx...:..x....:....x.................x..........:...x...............:.....................x......:x...:..:x........................:.................x:..:...........:..-............x::...........x:.x...x.....:..x:...:..........::x..:.:x.x....:.x.:..:--...x.x-......:.x::x:x..:..---.x..::.:xx.:.......-.x.:x......x::.x.:x.:x:...----------------..::.:.:...::.x.:..:x:xx...xx.......-.::xx..x.......x.:... 33M1D58M1I19M2I76M1I160M3D81M15D76M12I17M4D141M1D14M4D5M1I30M6D15M3I9M1I25M8I33M6I149M1I33M1D27M2I7M20I14M6I10M1I16M5I16M1I13M2D18M3I41M30I10M8I41M5I21M4I7M3I9M26I16M2I27M7I32M16I21M19D32M6I13M9I15M3D26M1D18M7I7M2I22M32I25M2D10M4I9M2I17M1I10M3D16M4I11M8I16M3D15M9D16M7D20M13D11M21D15M6I15M2I64M10D107M1I35M7I40M1I16M6D9M1I167M1D81M2D6M1I19M3I19M1I26M16I36M1I21M 1672/2305 72.5% 2595/94230402 0.0% 427/2305 18.5% 53235545 NA +11562 chr4 + 190214555 108350407 108350406 108350737 331 AAACGAAGGTGCTGAGACTTGCCTCCCACCAAGCCCCGCCAAGGGCTGCCTG--CTCTGCCACGAGGGGTGTTCCTGCCGCCCCGCGC-TGCAGTGGG-AAGTGTCTGCCAGCTAACTGCAAACACAAGCCTACCAGCAAGCA-------------CGGGAATTCCAGATAGAGACAAATCTAGGGCCTCAGGGGAAGCTGGATGGAACTGATCAGTGTGAGAGATA-TCACCGCTAATTAAGTCCTGATCCCCTGGCTCCACTTGAAACAAACCAAGGAGGGATCAAGTTTTGCGAGCAGGTGCTAACTGGTTGCAAAAGAGGAGTCCATCACTTCAGCAAAAGGTTT chr4 - 94230402 55104792 55104791 55105131 39125272 39125271 39125611 340 AGATGGAGCTGCTTCAACTTGCCTTCC------TTTCTCCCAGAGCTGTGCAGCCTCTGCTGCCAAAAGCACTCTTCCATTGTAGCACATGCAGCAGGTAAGTGTCTGCCAAATGAC--AAAACACAAACCTTCTAACAAGCAGCTGAAGGTAGGGTGGAGATTCCAGATAGAGACAAATCTATGTCCCTGAGGAGATCTGGAGCAAACCGATCAGTATAAAAAGTATTCACTGCTAATTAAGTCTTGATCCTTTGGCTTCACTTAAAACATTTTGGGAGTATATCAAA-TTTGAGAGCAGGTGCTGACTAGTTGGAAAGCACTGGTCCATCATTTCAGGTAAGGGTTT .:.:.:..x....xx:........:..------:::.x..x..:....:x::--......::.x.:::.:::..:.x.xx:x:x..:.-.....::..-............:x.:..--x........:...x.:.:......-------------:..::......................x.x..::::..::.x.....xx:...:.......:.:.:.::..-....:............:......::.....:.....:.....xx::::.::x:x.....:-....x...........:...:....x...:x.xx:........:.....xx..:..... 27M6D19M2I34M1I9M1I18M2D24M13I71M1I61M1D59M 224/322 69.6% 340/94230402 0.0% 27/322 8.4% 53245615 NA +3426 chr4 + 190214555 108356485 108356484 108356568 84 CTGCAACTTCCATCTCCCGAGTTCAAGCGATTCTCATGCCTCAGCTTCCCAAGTAGCTGGGGCTAAAAGGCGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA---CGTGCACCACTGTG ..:..:.::xx.x..:.:.:.......:.x...x..x.x......:.::...........::...x.---..::......::.. 67M3D14M 56/81 69.1% 81/94230402 0.0% 3/81 3.7% 90159359 NA +9969 chr4 + 190214555 108360017 108360016 108361480 1464 GGAGCCACCAACTGGA---GGCAGCAGCCCTAGGCTGTTGGAATGGCTGCAGTGGGTCTGTCTTTGAAGTCTTACCCTGCAGTTATCTCTCATTGCACCAGGCAGGCTGTAAGCAAGCCCGTTGCATGCAGCTGTCACCATTTAAGCCAGCATGCGTTTGAAGATGTGCCGCCCCTCACCCCTTGTGAGGGAAGCCAGAATAGAACAAAGTGTGGTGTTCCCATGAAATCATCTGAGTGCTTGATAAGAGTGTGAGT--CTGCACCTTTTCCCCTTGACGGAAGGAGGTTG---------GGAGAAGGGGTCAGGGAGGAGACAAAGCTCATATTACCTCCTCTTTGCAAATGTCCTACACA------------GGTAG--------------CTGTAACTGCCACA-------CTTTAAGGCAGT--TCTTGATGG---------TTCTTGATGACAAAAGTGTGCATATGGTAGAGATGGTGATGATGGCAGTGGGAGGGAGGTGTGAGG-------------------------GGAAGACAGGTCTCAGGATTTCT---GGTGGAC-----TCGTC----ATGTGGGCCCTTACCAAGCAATTTTTCTCG---CCTCTTCCCTTCCTTGTTCAGAGCACAGTTGAGACCC-------CAAATCTTCACGCTGCTGTC---GAACATATGTT-------------------------------CTAGAGGAGTGGTGAGATAATGTCGCA----GCCGTTGAG-GCAGTAAGCATTGGCTGTGGTTTTT---GATTTCCTCACCATGTCTTTATCACTTGATGAATGTATTAGTCTGTTTT--ACCCCTGGAGTAGGAGCTAGGACAT-TTTTGCCATCTCTTTTTCCCC--------ACTCCCATGCTTCATCTCT-TAAAAGAAAGTGGCTGC-TCAGAA-GAGCACTGAATTTACCCAGACCTCCCAA----ACATCCCGTCAAAAGCT-TCTTC--------------------------CTTCTGGGT-TGATTTATCTGTTGCTGCAAATATGATACCACACATGGAGAACTGGCGCTTGGCCTCTGAGAGCAGCTCCTT---------GTAACAAAACTATTTACAGGATCCAGG----CAGGGGCGAGGCGCGGGCAATGCGCTGGAGGGTCCGAC-GTTTGCTTTCACTGACCAGCTGTCCT-GCTTGGTGAGCTGCCCTTGCGGCTGACTTCACAGAGAAGCCAAGCAACCAAGAGCAAATTGCTCATT------TTACAAACAAAAATGCAGACAGTAG-----------------------------------------------------GAGAGCCTGTATAAG-----CTGAGTTACAAATTGCTGTCAGGC--CTGCGTGGGCAG-TTGGCAGTC------AAGAATGGAGCCTCAGGTTCTCTGCCTGAGGGGAAGGAAGGGAAGATTCCTGTTATTCACACTGGAAGGACAGTGGAGGAATTCCTGGTATGAGAATTGTCCGCCTCTCT-CTGCATCTGCAGACACCATGTGGCTGGCCTGTTGGTGGCCGGGGAGATTACATAAAGGG----TTGGAAAGCTCACAGTCTTTGTGAAGGAT-----AAACATCTTCCCTCTGCCACCAAAGCAGTAGC----------AATTGTGGTTCCAGGATGGGAGGTTT---CAAAACAAAAATAGGCCAGTGCTATTGGCATTGCATTGCCTTCAACAAG chr4 - 94230402 55108047 55108046 55109766 39120637 39120636 39122356 1720 GGAGCTACCAACTGGCATTGGCAACAGCCCTGTGCTGTCCGGGTGGTTACAACCAGT--GTCTTTGAAGTTCTGCCCTTCAGCTATCTCCTATTGCACACAGCTTGTGATACATGAGTCTCTGTCCTGCAGCTGTCACCATTTAAGTCAGCAGGCATTTGAAGCAATGCTGGCC----ACCCCAGGGAAAAGGACAAGAGTTGAACAAAGTGTTCGTCTTCAATTAAACCATTGGGATGTCAGTGCAGAGTGCGATTCCCTGCAACTTTCTCCTCTAAAGCCAGTGTCATGTCTTTTAATAGGGAAGAGCAGAGGCAGCTGTCAAAGTGAG--------CTAGTTAGTAAAGGTTTGAACCAAAAGGGGATATCGGTAGTGGTGTCAACTGGTTTGTAAGTGGGACAAGCTGACATTTTAGGCAGTAGTCTTGGTAAGCTCCAGCTCCCCTTTTGACTGCTGTCTTCACTTTGAAACTTTGCTGCTGAGCACA-TTAGAGGGAGTCAACAGGATAATGCTCAGGCAGCTAAACCAGCAGAAGAGTTTTATTAAGTTTTCTCTCAGTGAACCAAGTTCATCTCCAGTGTAAG---------GGCAATTCTTATTGAAACCATATCTGAGACTGCTGCTGAAGACAGTTAGAAACCAGTGGCTCAGATCTTTGT-CTGGTGTCACAGTATGTAGGTTGTCTTCACCAGGTAAGACTTCACCATGCAAAGTATAAGCGTAGGAAAAT-ATGACCCACCTGGCTGCTGAACTCACTTAGTCCTGGGCTCAATTTGCCCAAGTATCTCTTTTTTGTCTTTCTCACATATCAAACATGCCTGCCTGTTTTGAGCCACAAAAAAAGCAGTAACAACAGACTTTGACACCTGTGTTTCCTCCAGCTGTGAGTCTCATCTTTTTTTTCTGCCAACCACTTTATCTGCTTCAGAATGAGGGGAGAGTT--CTCAGAATTACAAACGCTGCTCTGCAACAAATGGTGTCTTCCTTTGCTTTATCTGTACAAGTATGTGCTTCTGGGTATTATTTGTCTGTTTCTATGAACTTTA---CATGC-TGCAGGGTATGCCCCTGACTTAAGGAGTGAGTTTAATACAAATTGCATAACAAAACAATTTAGAG--TGCAGGCTCACATATTTAAATCCACAGTTTCATTCTTAAGGATCTGACTTTTTTCTCTCCCTTACCAGCTGTCCTCCCTTAGTGAGTCGTGCTGATAAACAGCCCTGCTGAGAAACCAAATGGCAGAGAGCAAATTGCTTTTTAAAAAATTAAAAAGAGAGGTGTAGAGAGGAGGGGGAGCGTGAGAGACAAATCTTGAGGGGGAAAAAAAAAAACAACAACAAAAAGAGGGTCAGAAAAAATTATTCTGAGATGCAAACTGCAGCTAAATAACTAAATAACTAGACTGGCAATCTGTGCTAAGACTGGAA--------TTGTTGCCACTGAAATGAGTGGAAAATATTGTTGTCACTCACAGCAGAAGAGCAGGAAAGGAATTTATGGTATGAAAGTTG------TCTCTGGTGCATCTGTATTCACCATGTGCTGGGCCACTTGGCAGGCCAGGAGGTTACATAAAAAAAATCTTGGAAAGTCTGCTGTCTTTGTTTAATATATCAGAAATGCTATTATTCCATAACCAGAACAGCAGCTCTGTATTAGAACTTTTAATATAGGGTAGGGACTGTACACAGAAAAAAATGAAAGCTGTCCTGCTTGCATTTCATGAACTTTCAAAAG .....:.........x---....:.......:x.....:x.::...:.:..::x:..--...........::.:....x...:......::.......xx:..xx.:x:..x:::..:.:x.xx.x....................:.....x..:.......xx:...:.x..----x...:x.x..::::::.x...:.x...........xxxx:.:.x..x...:...:x.::..::x.xxx......:..x.--.....x....::..::.:.x.xx..x:xxx..---------:.:....:.xxx...x..xx.x.....:xx:--------.:xx..x.:...x..::x.xx..------------.....--------------:.....x..xx...-------x...x.......--.....:.::---------::.:.xx....x:xx..x.x..:x.x.x.:xxx..x..x...xx:..-.x:.......x::xx...-------------------------:.....xxxx.x.:.:.x.....---:...:..-----..:..----:...::.---------:......:..x.:.---..x:x..:xxxx..xx.x.x..:x......:::.x..-------..:.....:::-...x....---.x.::..x...-------------------------------x..x.:.x..:.x:.:..-...x.x..----..:.:...:-x..x.x..:x:...x:x:::...x:---::.x..:::x::x.......x....x.:x::..::.:::x.:.......--:..x.x::.:x..x..:x.x:...x-:....x..:..x.x.....:.--------.x..:...x:..:x.:...-:x..xx.xxx.:x....-......-...x:xx..:..--.:....x:.x.x..----:.x::x.:x....x.x.-.....--------------------------.........-.x....:......x..:::..:x.x.---..::.-..x..:::xx..x.:..:.:.xx.:::xx..:.:xx.---------:.........x.....x..--.x....----..x:xx::.:x.xxx:.:xx:::x..x:...:..:...-x...x..:..x..x............-x...:.....::.:x..x::::x:::.::::.x.....:....::::.x:.............:x..------...x...x.:.::..:...x..x..-----------------------------------------------------...:.:.x.x.x..:-----.....x.:....:...x.::.:::--..:x:.::x:..-:.....:..------....x....:--------.:x:....xxx.:::x::.x:.::..x...x:...:.:.....x::....::...x::.......:x........:.:...------.....-x........:.xx.........x:x....xx....::.x.x:....:.........:::----........::::.x........xx.:x..-----...::::x.:x:..:::x....:.:...:...----------..:.x.x:x.x:...:.:..::x.x.---..:..x....xx.::x.x..x..::.x.....x...x:x...:x.x... 16M3I38M2D115M4D79M2I32M9I31M8D23M12I5M14I14M7I12M2I9M9I47M1D18M25I23M3I7M5I5M4I7M9D14M3I37M7I11M1D8M3I11M31I18M1D8M4I9M1I25M3I49M2I25M1I21M8I19M1I17M1I6M1I12M2D14M4I17M1I5M26I9M1I26M3D5M1D37M9I19M2D6M4I38M1I26M1I67M6I25M53I15M5I24M2I12M1I9M6I10M8D81M6D5M1I59M4I29M5I32M10I26M3I49M 871/1416 61.5% 1720/94230402 0.0% 352/1416 24.9% 53251970 NA +7288 chr4 + 190214555 108364774 108364773 108365020 247 AGCTAATTGCACCTGGCA-CCCATGGAGTGACACTTGGGGTCATTGATGTTTG-GCCATGCCTCTGCCCAGTCT--CTTTACTTTGTTTGCTTGGGCCAATTTCTTCTCTGTTGCCCATAAATATTTACAGCTCCTACATGCCCTTGCAAATTGGATTAATCTTAGCATATTTCTGGGACAGTGATGCCCCTGTCCAACCTTAGTTCTAAG------GAATAGGCAGAAGCTTTTTTTTTTCTTTTTACTGAGTGAA chr4 - 94230402 55117839 55117838 55118094 39112309 39112308 39112564 256 AATTAATTATACCTGGCAGCTAATTGTAGGAAAGTTATGGTGATCAATGTTTATGCTGTTTTTTTTTAATGTCTACCTTCAGTTTACATACTTGGATCAGTTCCCTCCCAATCATGAATAAATATTTACTGCTTATATGTTCCCATGCAAATTGGATTAATTTTAGCATATTCATGGAAGAAGAAGATCACTGCCTACCCTCAATATTAAGTCAGCTGAACAAGCA-AAGTTTTTTTTCCCCTGCTTAAGTAGTGAA .::.....::........-.:x..x.x:x..x.x..:x...x..::......:-..::.x::.:.x:xxx....--...:.x...::x.:.....::..:..:.:..:.x:.:::xx............x...:x..::.x...x................:..........:x...:.x.:x:.x::.x...:.:.x...:.:.x:....------...:.:...-...:.......:::..x:...xxx...... 18M1I34M1I20M2I135M6I9M1D30M 161/246 65.4% 256/94230402 0.0% 11/246 4.5% 53246935 NA +19464 chr4 + 190214555 108369896 108369895 108370773 878 TTTCACTGCCTAGTGTCAGATCTTATAATCCCCCTAGTTAATAGAACTACGGATGTCCTCAAAGAAACAAAGGGATAGCATTCTGCCCTATTAAATGTGTTTCTGCATTAATCTAGGAATT--GTTTGTTGATAACCAAATGCATAGCAA----CTATATTTAAATTTCAGAAAATTACAATTAGGTGTCTTTGAATAAAGACGAAGAAGAAAGAAAGGAACCGAAAG----CTATTAAGTGG--AGCTTCTAAAGTCGTGGCTAGGTGCTATTTCAAAACAAACATGTCAGCACCATCCCAGTTAAAGTAGATCAAACCTTCCAGTTTCTTCAG-----GAGTTGTACTTGGAATATGAAATGGGAATTTTGTTTAGGGTTTTTCAGGTGCGATGTTTTTTAAAAATT----TTGCAAGTAATATTTTGAATGCAGTTGCTTTTGAACAGGGCAGCGGGGGAAGCCAAGTTAGGTTAACAGATCAACCATAGAAAATTCAATAGGGTCTTTTGCTAGGCGAGAGGGAGCCTGTGGCTTTGCCATGTGGTCGTGCGGCTCCACCGAGTTGCTTTGCCTGTTTTGCAGGGGTTTGTGGTGTGTGGATTCACTGACACTTTGGTGGCGGGAGGCTGACGATGGCTCTTCGGCGGGCTCAGCCGGCTTGGCACAGTCTCAGCTCTGGGAAGTCCACGCTGCTTTACAAAGAGCAGGTGGGCGAGAAAGCTCAACACTGCAGGGCAGATTGTGCAGCTGTGAGAGGTGGAATTCCCCTCAAAAGGATCGGCACTGCTTTGAAAATAAATTCATCATTAAATAGAAG-GATTTCTGAAGCAGTAGACGAACACAGGGCTTGATTGGTTTCAAATTAACTC--TTTGTACTCATCTTTCATTCATCCT chr4 - 94230402 55124964 55124963 55125816 39104587 39104586 39105439 853 TCTTAGTGCCAAGGGTCAGGTCTTTTAATCTTCCCTGATAATAAAACTACATTTGCCCCGATGAGAACAAAGGGACTAAATTTTGCCCCAGTAAATGTGCTTTTAAATGGGT---AGAGTTCAACTCACTGGCATCTGAATGCACAGCAAGAAATGAAATTAAAATTTTAATATATGCTGATAAAACAACAT-GAATGAAGAAGAAAACAAAAGCAGGCAAAAATAAAGTAACTATCAAATGGGAAGTACTTAAGGCTAGACTTATGAGATGTTTCAAAGCATGAATTGTAATAGG----TGTTTAAAAT---TTGACTGTTCCTTTATTCTCAGCATGTGGGTTATACTTTGAATATGGAACAAGA-----GTTTAACCTTTTTCAGAAGCTGCATTCTTAACAAATTATTCTTAAAATGAAACTGTTTAATGAAACTGCCTTCTAAGTGCTCTATAAAAGCATGCA--TTA--TTAACATA-AAACCATACATAATACAATATAACACTCTGCAAGGTAACAATAGTCTGCTAACTCATTCAT----------------ACACAGTT-CTTTACTACTTTTACTTCAGAATATAATGGGCTA-------GGCATTGTCTTTGCTGGAGATCAGCGACAAACATAAAGTG----CAATTTTACTGGCAGAACCTCAGCTCTGGGAAGTTCATGGTGTTTTGCAGAGAGCAGGTGGGTGAGCAAGGCGTACACTGCAGGGCAGATTGCACAGCTGTAAGATGCGGAATTCCCCTCAAAAGGATCGGCATGTCTTTGAAAATAAATTCATCACTGAATAAAAGAGATTACTGATGCAGAGAAAGAAAATGGGGTTTGATTAGTTTCAAATTAACTCTTTTTGTGTTTGTTTTGCCTTCATCTT .:.:.x....x..x.....:....x.....::..:x.x.....:......:xx..:..:x.x:::..........:x:x...:.....:.x........:..:.:x..x::.---:..:..--::.:::..::.x.::......:.....----:x.x...x......:.:x.x..xx::..x.::::x.x.-....:....x...:.x:....x.:.x..xx:x..:----....:..:...--..:x::...:.:::x:x:..x.x.x.:.......:..x:x..xx:.::.xx----::x.....:.---.::.x:x....xx.x.::....-----.:...:.....x.......:..:::..-----.....:xx........:x..x:::..:..x.x.....----..:x..xx..xx.x..x....x.::...:..:x..xx.xx.x::::::.x.xx..--...--......x.-x.......x.x...x.....x:::x:.:...x...::.x.:x::x.:xx.::..:xx:...----------------..xx....-....:.:xx....:.xxx:.xx.:.::..x.:x:-------.:..:.x.xx.x..x....:::::...:::x:x.xx:.:.----..:::xxx:.....x.::................:..:.x..:...:..:............:...x...x:xx..................::.......:...x.:.........................:xx....................:.:....:...-....x....x....x::.x...x.::...:......:...............--.....::.::.:..x.x......:. 112M3D6M2I27M4I38M1D35M4I11M2I51M4D10M3D22M5I27M5D37M4I55M2D3M2D8M1D61M16D8M1D34M7D40M4D167M1I52M2I25M 533/829 64.3% 853/94230402 0.0% 73/829 8.8% 53244932 NA +15219 chr4 + 190214555 108371910 108371909 108372293 384 AAACAAACCTCT--CTTTTT---CATTTCCTTAAAGAAAAAAGAAATTTAATTTGGATTCAGATAATACCCTTATAACTTCTAAGGCAGTCAAGCAAGGAGGGGAACAGATAATTAGGAGATGATGGGAGCCAGCACAAAGCCAAATGGAAGAAAACAGGCACACAGTAAGGCGGCAAAAGCCACCACCTAATCCATTAACAGCCTGCACTATAATTACGCTTGGCTCTGGCATTAAACTGGTGAAAGCACAAAGGAGACACTATTAAAGTCTTAATTCCCAC-AAAAGGAAGCTCATCCTGTGTAACAGCAAGTACTGTGCACCAAAGCGGCACCTAAATGAATATTATGGCAAATTCTAATTTAGCACTTAGTAGGAGCATTCCACAA chr4 - 94230402 55126567 55126566 55126947 39103456 39103455 39103836 381 AAATAAAACTCTTACTCTTTAAGCAATTCCT----GAAAAACACTAATTAATTTGGATTTGAATAATACCCTCA-AAGTATTAAAGCTGCCAA-CTGAAAAAGGAACAGATAATTAGGAGATGACAACAGACAGCACAAAGCCAACAGAGGAAAAATTGGAACGCAGCTAGACTGCAACACTGGCCATCCAATCCATTAACAGCCT--CCTGTAATTACGTTTTGCTTTCACATTAAACTGGTATAAACACAAAA-AGACATTACTGAAGTTTTAATCTCCAGGAAAAGAAATCTCCTCCTGCCTAACAGCACGCAGCACACACAGAGATATGACTTCAATTAGCACTAGTTTAAATTTTAATTTAGCACTTGGTAGGAGCATTCAGCAA ...:...x....--..:...---..x.....----......x:xx.x............:::..........:.-..x.x:...:..x.:...-.x:::.::......................:::x..x..............xx.::::....:x..x..:...:x..:.x....x.x:x:...:.:................--x..:........:..x...:.x:............:x..:......:-.....:..:.:....:.....::...x-.....:..x...x.....:x........x.:.x::::...x:.::::xx..:.x...x.::.:..xxx:.....:.............:............x:... 12M2I6M3I8M4D39M1D18M1D112M2D47M1D27M1I106M 272/375 72.5% 381/94230402 0.0% 15/375 4.0% 53245343 NA +8615 chr4 + 190214555 108375007 108375006 108375250 244 TTTAGTGGTGCTCATAGAACAAGGTCCA--GATTTACTTTCCACTTGGTGTTCGTTCTGTTCATTAATTATATTCATATCTGCTTCTTTGAAGTTATTGAGACTATTGGAAAATGTAAAAGAAAG--CTGTATTGATTTCAGTCTTA-----TTATCATTCCATC-TTTATTTCCTTCATCT-ATGAACTCTCAGGCATGTTGAGTGACATGTGGTGGTGGGTATAGTATGTCAGGCATGGTGTAGGGCATTATC chr4 - 94230402 55127549 55127548 55127798 39102605 39102604 39102854 250 TTTAGTGTGAATCTTGAAACAGGGCCCTATGTTTTTTTCCCCTCTTGCTGTTTGTTCTGCTCTTTAATTACATTCATATCAGCTACTTTGAAGATAATGAGACTGTTGGGATATGTAAAAGAGAATCCTGTATTGATTTCAGTCCTAATATCTTATCTTTGCATCTTTTCCTTTCTTCATGTAATGCGTTCT-----ATGTGTTCTCACATGTTGTGATCGGTGCAAGAGCTTCAGCCGGTCATAGGGCTTTATC .......xx:x..x.::....:..:..x--.x...x:.::..x....x....:......:..x.......:.........x...x........x..x.......:....:.x..........:.:--.................:..-----.....x..x....-...x:..:......x.-...x::...-----....xxxx.x......x...:.x...::.:x.xx.:x:..xx.x::......x..... 28M2I95M2I20M5I13M1I16M1I9M5D58M 176/239 73.6% 250/94230402 0.0% 16/239 6.7% 53247458 NA +3153 chr4 + 190214555 108403582 108403581 108403656 75 CTAGCTGAGTGATCTTGAGCAACTTATTTAATCTCTCTGAGCCTCAGTTTCCTCAATTGTAAAATGGGATTAATA chr4 - 94230402 11947211 11947210 11947285 82283118 82283117 82283192 75 CTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA ...:...x....:...::.:x.x.:.:.......x:...x.:.:........:..xx.:.:.....:xxx..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 96456371 93758184 +8288 chr4 + 190214555 108429942 108429941 108430174 233 CTAGTGGGTGGAAAACATTTCCCCAAATCAGAACTGGGTATCTACCCTCCACGTTACTTCACTGGATGCCAAAAGGTTATCTGTGAGGAACTAGGAAAGGAAGTATATTTGAAAACATCACTGGAACTTGTATACAACATCTTAAGGTGTTTGATCCTTTTATGAACTGTTGACAGCTTTTCGCCATTGAAGTCTATATGAGATTTGCCAGCCAAGTGAAAGGAGGAAGCAGG chr4 - 94230402 55138570 55138569 55138798 39091605 39091604 39091833 229 CCAGTTTGTAGGGAA-ATTGTCCCACATGCTGACTGTATATCTGATGTCCAAATCAACTCAGTGG-CATCAAAGGGATATCTGAAAGGAAACGAGAAAGGAAGTAAATCTGAAAACAGCTCAGAAACTTGTATGCAACATCTGAAAGGGTTTGGCCCCCTTATGAACTGCTGACAG--TTTTGTCACTGCCGTCTGTGTGTGAGCCACCAGAAAAAAAAACAGTGGAGGAAAG .:...xx..:.::..-...x:....x..xxx:....x:.....:x:x....x:.:.x:...x...-:::....:..x......x:.....x:::...........x..:........x.x.x.:.........:........x..:.x.....::..::..........:......--...:.:..:..xx....:.:..x..x:::....xx..:x:..x:.x...:.x.:. 15M1D49M1D110M2D55M 155/229 67.7% 229/94230402 0.0% 4/229 1.7% 53291372 NA +3039 chr4 + 190214555 108448955 108448954 108449035 81 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAGAAAAAAAGATT chr4 - 94230402 3442076 3442075 3442156 90788247 90788246 90788327 81 TTTCAAAACAAAGGGGAACAAACAAGCCTTATAGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAAAAGGCT .:......x...::::..x...x..:xxxx.x..:..:....:.....:....:.:.:.....::..:..:xx.....::. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 105006879 85207676 +3076 chr4 + 190214555 108448963 108448962 108449035 73 AAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAGAAAAAAAGATT chr4 - 94230402 48876265 48876264 48876337 45354066 45354065 45354138 73 AATAACACAATAAAAATTATAGAAAGAGAATGGGTTAAAAAAAAAGAAAGAAAAAGGAAAGAAACAGAAGTTT ..x..x.x..x.....xx.x.......:.:x::.xx.:...:..................::..x.:...x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 59572698 NA +3347 chr4 + 190214555 108448973 108448972 108449037 65 AAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAGAAAAAAAGATTTA chr4 - 94230402 27809316 27809315 27809380 66421023 66421022 66421087 65 AAACCAGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTA ...xx.::.:.:.::.:....x:....x...::......x..............::...:..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 80639657 NA +21291 chr4 + 190214555 108454246 108454245 108454842 597 TAAAAAAGCCTTTGAAACTATTGATAATTAATAAGCCAGGGAGTAGCAATTAATATGTGTAGAGATGGGGCACCTACTGTTCTCTGAGCCATAGCTCATTTAAAATACTCACCCTGTAATTTATGAGCGATATTTAATACCTCAGTGACCATAAACCTCAATGTTTTATTACCACTGCTTAGCATACCTTTGATGTGCTGCCCAGCACTACACAATCCAAAACAAATTACTTTCAGGAAGCTGGATATTATATAAATGCAGGAAAGTCATAAATAATGCACAGGAGGAACA-TTTTCTGTGGGTTCTGACATGCCACAGTGGGTCTCTGTGA-----GTCTCTGTGAGTCTGACTTCTCAAGCATCTCACTGGGCTTGGATGAGGGGCAGGAGGGCGGCCCAT-CTGAGGAATGGT-TGGTTGTCAGACAGGGTGGGAGTGCAGAGGGCCAGGCACTGACTGACACC-----ATATTTTAAACCAATAACAGAGGGAAATGGAAAACAAATG---AGGACTCTTTAGGAAGCTATGATCTACTTAGTGAGCTACAGATGTGTAAGGAACA-AACCCTTCATTCATATTTTTGGTGGGCTCTTCATATTCCTCTT chr4 - 94230402 55145090 55145089 55145698 39084705 39084704 39085313 609 TAAGAAGATATTTGAAACTCTTGATAATTAGGAAGTCGGGCAATGGCAATTAATACTTTCAGACATGGTGTTACTGCTCTTCTCTAAACTACAGCTCATTTAAAATGCTAGCCCTATAATTTATTAGCAATATTTAATACCTCAGTGACCATAAAACTTAGTGTTTTATTACCACTGATTAACATACGTTTGATGTTCTGCCCAGTGTTACACAATCCAAAACAAATTACTTTCAGGAAGCTGGATATTATATAAATACAGAAAAGCAATAAATAATGCATTGAAGAAACATTTTTCTTTGGGTTCTAACATGCCACAATCGCTTCAAATGACTTAGGCTTCTAAGG---CAATTTCTCAGTCCTCCAAGGGTGTTTGCAGCAAATAACACACTTCACACCATGCTGGCTACTACTATTGCTGCCAGTCTGCTGGTGATTCCTCCCATCCTGTCAGCCTCTGATACCACTGGATATTCATGATTTATG--AGAGGAAACCTGAAGTTGCTTGGTCAGAGTGTCTTCAGTTATGATGGTCTCCTTAATAAGCTACAGCTGTGTAAGAAACAGAAAGGCTCTTTCATTTTCTTGGGATGCTTTTTTCCTTCCTCTT ...:..:::x.........x..........:x...:.:..x.:.:..........:x.x:...x....x.:xx..:..x......:.:.:.:..............:..x:....:........x...:..........................x..:.:................x...:.....x........x........:::.................................................:...:....:x............:x.:..:....-......x........:..........:.x.x.::xx:...-----.::...:x.:---::.:......:x.x..:x.xx.x.:...x.xx.::x:xx:x.xxx.:xx....-...:xx.x.:x.-.x.:..:...x.x.xxx.x..x.x.xxxx:x..x.x..x:xx....:...-----.....:xx:.::x..:--.....:..x:x...:x::xx..---..:::x::..x:.xx::x...:...x....:.:........x........:....-..xxx:..x.....x..:....x:x...:..:x:x........ 291M1I40M5I10M3D53M1I12M1I50M5I16M2D22M3I55M1I43M 414/592 69.9% 609/94230402 0.0% 22/592 3.7% 53309156 NA +3128 chr4 + 190214555 108472483 108472482 108472542 60 ACAAAGTTGAAGGACTGAGAATGAGTTTTGTTTTGTTTTGTTTTGTTTTTTTTTTTGAGA chr4 - 94230402 76824468 76824467 76824527 17405876 17405875 17405935 60 ACAAATGTGAAGGAGTAGGAGGGGTCTTTAGTTTGTTTTGTTTTGTTTTTTCTTATGGGA .....xx.......x.::..:x.:x:...:x....................:..x..:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 31648015 NA +3444 chr4 + 190214555 108472596 108472595 108472667 72 CTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCATGCATCAGCTTCCCAGGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.............x...x..x.xx.....:.::..:..........:....x.::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 90275470 NA +25728 chr4 + 190214555 108483652 108483651 108485287 1636 GAGCTTTAGCCCAAGTCC-GGTGCTGTTTGTTTGTTTTAGGGAACACTGCTTTCATCTTTGTGGAGGATGTCATAAAAGCACATTTCAAAAAATTACCATTGGCACCCAGTTTCCTATTTGATTACATTTTGGCACATAGCCCTGCCAGTCATATAGAGCCCCTATCTCAGTCCCTCTGATTGAAAGATAATCAGATGTACCACCTACCTTTCACCACCCCCACCCCCTATGCTGGAGCAATCTTCAATTGCGGAAGCCACAAGAAATAACTGAAATTATTTCAGAAAGTTGGTACTTTCCATTTTAGTTTACTTCAAGCATATTCATCAGGCCCCCTTGGAATAGTGACATTAAGAGCGCTAGGAGTTAGAAGCACCAGATACCAATTACAAGCTGAGAACTAAATGCCATAATTAACGAGACATATACTTTAATCTAAAATAAGTCAAAAATGTTGCTGGATAAAGCAAAAAG-TAAAATAAAACTCCAAAATTATACTAAATTGGTATACAATGGATAGGTTTCCCACCTATCAAACAAGAAAGGTGGTTATGTCTTTGAGATACTGTAGTCAAGTGTTTTATAATTAACATTTAACT------CTGAATAAAGATCTCACATTAACAAACATACAAGTCAA-------TTGCACACTTGAACCTCAGAGACT----GATGCACAT---CAGTGGCACCCACCCGACACCAATTTCAAATCAATTCTTAAAAACAAGGTTATGCATCTTTTTCATAATCACCATACTGATACAATGAGTCATGCATATTTTTCTCATATACAGATTCTTAGTTTCCT--TTTTTCTTTGCAGATGAGTTGATGGCTTCC-CATCTGGCTAATTCCCCTATTAGCTGGACCAGCAGGACCCCACCTGGTCCTCAACCTAATGTGTTTTACCTCTCTGCCAGATTTTGAATACTACATAGAATACAGGACCACACAAGGGTTATGCCTGGGAGCAGAGTGAACCGGAAGGGGCTGTGGGAGGCAGGTTCTGTAGTAAAAAGAGGGTGACATGTAGAAAAATACATGCTGTTTGGTGCTTTTCCTGGATATCTATTAAT-----TTCAATAAATTTCTTTTTGGAAATCAATACTGTTAATATATGCATTGACTTTTCATTGAGGGCAATGCTTATGTCCTCTTTAGCAGACTTCTAGAATACATGTAAACAACATTGCAACACTAATAGACTTGAGGGTTTGTTTTTCTGTCTTAGCAAAGATTGGTGGGTACATTAGGGGAAGATAAAGGGAAAGAGAGAGAGAGAGAAA-------GAGAAAGGGAGCAATAAACAGAAAGAGAAAGAAGCAAGAAACATGGAACCATTCTCTGTTAATTTTGAAAGCT-TCTACCAGGATCAGGGCAATATGAAAAG---AGGAAAATAGACAGATAGATGAAGGGCATTGTAATCATAAAATGAATGTATCAAGGTTAAAGTATTTTTCTAATCCCAGGCTGCAGGAGGAAAGCTACTGCTAATGAAGTCCCTCCGTGAAGTTTTATTCACTAGCTTGCTCTTTACAAATGGAAACAGAAGTGCAGCCTGGAGACCAATTACAAATCACTCTTCTGATTCCTTTAATCTCTTTGTTTCCATTTCTGAT-CAAAATAAAGATTTTTTTAGAC---------AGAAAAAGGAAA chr4 - 94230402 55161422 55161421 55162854 39067549 39067548 39068981 1433 GATTTTTAGCCAGTGCCTTAGTGGTGTTTGTTTTTTCTAAGCAGTATTACTTTCGTGTGCTTAAAGGATGTAATAAAACCCCTT-----AAAATTA---TTAGAGCTCAGCATATGGCTTGATTAGCTCTTGGCAGGTAGGACTGCC-------------CACTGTCAC---CCCCCT--------------CAACTGTTCC---------------------TCTCCTAAACAGTA-CAATATTTAATCATTAAAGCCACAAGAAATATCTCGCATTACTCAAATAAGACGGTACTTTCCATTTTAGTTTACCTCAGGCAAATTAAACAGGCCCTCTTGAAATAGTGACAAGAAGAGTTATAGGAGCTT--AGCACCAGACACCAATTACGATTTGAGAACTAAATGCCGTAATTAACAAGACATATACTTTAATCTAAAGCAACTCGAATATGTGGCTGGATAAAGAAAAAAGGTAAGGGTAAACTCTGTAATTATAATAAATCGGTGTGCTG-------------------------AGGAAATGTG----TACCTTTGAGGGA---TATTCTTTTATTCTGCAATTAACTTTCAAGTGTTTTGCTAAATACC-ACCCCGC-TCCACACACAAACACGCCGAATCTTCCTCGCACCCTCATTCTCCCCAGCCCTCTGAATAAACATTTCCACAGACACTTTCCC---------------TCGGTATGCAGATAGCAGGT-GTGCCAGTAGCTGCTCATCGCCGTTATCTCACCA-----CCTGTGGACTTTTCAGAAGTAC---TCCACAGTGGCCCAATTTTGCTTT-CAGAAAAGGCAGTGGTGACAGTATTTGCGTGCTTCACTT-------GGAGCAG---------AGTTGGGGCGCTGCTCACTGCAA---ACTTCTCTAGCATAAG--GGAAGCTTCAAACAA-ACAGCATTTCTCCAAATATATA------AGCAATATGTA-----------TTTGTATACTTAGCTTTACATTACA----GTGTGGCAAATAAAATTACACCC-CTGTTT------TTGCTTGAATCTCTTTAAATGACAGCTTAATGCATTC--TTTCGGGAGTC----TTATTTATACAAGCCTCTCTTTTT--------GCCATGTTTTTGCCATCTGCAGTAGACTTTTAAGATGCATCCTAATA-CATAGTAATA--AACCATCTTGAA------TTTCTCCGTGCTC-------TTGCT-------------------------AAAAAAGGTAAGTGAGAATTCCTTTTGTGCATGTGTGTGTGAGACAGAAC-----------------------ACTGCCCTCTTCTAATTTAGAAAATTCTGTACCAGAACCAGA-CAA-ATGAAAAGGAAAGGAAAACGGACCGTTGAAAGTGAAGCTTTGTGAGTATAAGATGAACGTGTCAAGGTTAAAGTATTCCTCTAATCCCAGAGTCAGGAAGGAAAGCTGCAGCTAATAAAGTCCAACCATGCAGTTTTATTCACTTGCATGCACTTTACTAGAGGA---AGAGGTACAGTCTGGAGACCAATTACGAATCACTCGTCTGATTCTTTTAATCCTTTTACTTCCATATCTAATGAAAAACAAAGATTTATTTATGCCTATGTCTAAGGAAAAAAAAA ..x:.......x:x.:.:-:...x.........x..:..:.x.::.:.:.....:.x.x:x.::.......x......x.x.x.-----.......---..:.x:.:...:x.x:x::.......xx.:......x:...xx.....-------------.x..:..x.---...:..--------------..:x...x..---------------------:.:....x:.x.x.-....x..:...:::x:...............x..x:x....:.:x.:x...x:......................:...:...x...x.x.......:....:..........xx.....:xx......:.x--.........:.........:.x:...............:........:.....................::..x..:..x....x...........x......-...::xx......::x.......x.....:...:.:.x:-------------------------.:....x...----.::.......:x.---..x..xxx.:..:.::.......x..:..x.------..:....xx-.:.:.:.-.:x...x...x...x.:.:.-------.:....x..::xx.::.xx..x.:----:..:x....---..xx.:...::x...---------------..::.x:x:.:.x.xx....-:...xxx.xx:.xx.x...:..:.xx.xx:..x.-----.x..::x.:.....xx.x:...---.:.x:...xx..:--....x....-....x:..x:::...:xx.x-:..:..xx.:x...x.:.-------...x...---------.x:...xx.x.x:.::.x..::x---..:.....:x..x.xx--.:.x:..x..x.x..-....x.::x.x.x.::xx...:------....:x:..x.-----------.x..x:x:x:x:.:.:.::.x..x.----.x...:..x:..:..xx.:..x:-......------..x.:..:..x...x.x...-----:.:...:x...:--...:..:.:..----:.:..x...:.x..x.:xx:....--------..x...:..x..:.x...x:..:......:..::..:...x:x..:.-...x.:..:.--..:x:x.....:------...:..:..x:.x-------...x.-------------------------...:.::.x:..x.....x-------.x.x.x.x.x.::xx.:......x-----------------------..::::....x:......x....::.-.x......:.:...:-...-........---.......::...x.x.::.x.x:::..x....:.x:....:.....:..:................::...........:x.xx:.:.........:.x......:......xx..:..x.............x..x...x......x.:x...---...:..:...:...............:........x........:.......::...::......x...:..-x....:........x....x:.---------..:....::... 18M1I65M5D7M3D48M13D9M3D6M14D10M21D14M1D132M2D103M1I39M25D10M4D13M3D31M6I9M1D7M1D20M7I24M4I9M3I15M15D20M1D34M5D22M3D13M2I9M1D20M1I18M7D7M9D23M3D16M2D15M1D22M6D11M11D25M4D23M1D6M6D20M5I12M2D11M4D24M8D47M1D10M2D12M6D13M7D5M25D19M7I24M23D26M1I15M1D3M1D8M3I154M3D72M1I22M9I12M 942/1382 68.2% 1433/94230402 0.0% 305/1382 22.1% 53322230 NA +3024 chr4 + 190214555 108525365 108525364 108525403 39 CAACAACAACAACAACAACAAAAACTGTGAAGATAACAG chr4 - 94230402 12295699 12295698 12295737 81934666 81934665 81934704 39 CAACAACAACAACAACAAAAAAAACAGTGAATATAACAG ..................x......x.....x....... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 96229666 93984889 +3201 chr4 + 190214555 108535516 108535515 108535579 64 AAGACCCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGGTAGTGGTGAA chr4 - 94230402 37322382 37322381 37322444 56907959 56907958 56908021 63 AAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAG-GGTGGA ...x..:.........:..............:.:.:.:.:..:.x::..:...:x..-....:. 57M1D6M 47/63 74.6% 63/94230402 0.0% 1/63 1.6% 71213134 NA +14480 chr4 + 190214555 108560676 108560675 108560976 301 ATTAACAAAGGACTGTCCTTCCAACTCACACCAATCTGGGGGAGGAAATAAACCAGACAGCCCGAATGACGAC--AGAGTGGGATGAAATAACCCCTCCCTGGGACAATGCCTTTTCCTGTTTCTGGAGGCTCCTCCTATTCCCACACTGGCTTCTGCATCCGTTACTTGGCCAGGATCCTCTTTCACATCAAAGTGTCCCTCCTTGGGCTTCAGAAGTAGGGGCATAACCTTAGTTTCTACAGGAAGGCATTTTCATCCCAAAGGAAAGGGAAAAACCATGTGTTTGGTTGCTATACAATTA chr4 - 94230402 55190677 55190676 55190972 39039431 39039430 39039726 296 ACTAATACAAGGCTTTCCCTGCAGC--AAAGTGACCGTCAGGAGGAAACTCGCCAGACAGTCTCAGTGACGACCTGGGGGGGGATGATGGAAGCCC-CTCTGGGACAATGCTTTTTCCTGCTTCTGGAAGTCCCTCCTATTTCCACATTGGCTTCTGCATCCGGTACTTTACCAGGATTCTCTTTCACATCAAAGTATCTCTCCCCAGGCTACACATGTAGGGGCACAGCCTTAGTTTCTATGGGAA-ATAGTTTTATCCCAAAGGAAAGGGAAAGAA---ATGTTTGGCTTAAATATGCTTA .:...:.x.:.:..x...:.x..:.--.x.x::.:.xxx:........:xx:........:.:x.:.......--:.:.x.......x:x..x...-.:............:........:.......:.::.........:.....:...............x.....x:.......:.................:..:....:::....x..x.x.........:.:............::....-::.x...:...................:.x---:.......:.xxx...::x... 25M2D46M2I21M1D150M1D30M3D22M 223/294 75.9% 296/94230402 0.0% 9/294 3.1% 53369999 NA +6050 chr4 + 190214555 108570405 108570404 108570604 200 TTTCCTACTTAGAGTTAAGTTTTTACCCAAAGCATCAGAGGAATAGACAAAATCAAATAGAAACAGTTTCAATCACTTGCAGTGTTTAAAATATTTATAATCCTTGCTATAGCCAAAGGCAGCCGGGCTAATTATTTA----CCAAGCAAGTGGAAATGATGTCCCGGGG------------GAGATGGCAGAACTGATACATCAATTGGCAGAAA chr4 - 94230402 55197762 55197761 55197961 39032442 39032441 39032641 200 TTTCTTTCTTGAAGCTAAACTTT--------GCAACACA--ACTAAAAGAAAGCAAACAGAAATGGCTTCAATCATTCTCATTGCTTAAAA-ATTCATAATCATTTCTATAGCCAAAGGCAGAAAAGCTAATTATTTACTGTCCCAACCAGTCT-TATCACCTCCCGGGAAAATGTGCTATTGAGCTGGCTGCACTGATACATC----TGCAGAAA ....:.x...::..:...::...--------...x..x.--.x..:.x:...x....:.....::.:........:.:x..x..:......-...:......x..x................xx::............----..x.:.x...xx-x..x.:x.......:------------...x....x.x...........----x....... 23M8D8M2D50M1D46M4I12M1D15M12I22M4D8M 140/184 76.1% 200/94230402 0.0% 32/184 17.4% 53372643 NA +6181 chr4 + 190214555 108570405 108570404 108570604 200 TTTCCTACTTAGAGTTAAGTTTTTACCCAAAGCATCAGAGGAATAGACAAAATCAAATAGAAACAGTTTCAATCACTTGCAGTGTTTAAAATATTTATAATCCTTGCTATAGCCAAAGGCAGCCGGGCTAATTATTTA----CCAAGCAAGTGGAAATGATGTCCCGGGG------------GAGATGGCAGAACTGATACATCAATTGGCAGAAA chr4 - 94230402 55196029 55196028 55196228 39034175 39034174 39034374 200 TTTCCTTCTTGAAGCTAAACTTT--------GCAACACA--ACTAAAAGAAAGCAAACAGAAATGGCTTCAATCATTCTCATTGCTTAAAA-ATTCATAATCATTTCTATAGCCAAAGGCAGAAAAGCTAATTATTTACTGTCCCAACCAGTCT-TATCACCTCCCGGGAAAATGTGCTATTGAGCTGGCTGCACTGATACATC----TGCAGAAA ......x...::..:...::...--------...x..x.--.x..:.x:...x....:.....::.:........:.:x..x..:......-...:......x..x................xx::............----..x.:.x...xx-x..x.:x.......:------------...x....x.x...........----x....... 23M8D8M2D50M1D46M4I12M1D15M12I22M4D8M 141/184 76.6% 200/94230402 0.0% 32/184 17.4% 53374376 NA +20218 chr4 + 190214555 108577529 108577528 108577989 461 ATGTTTAAGGCAAAATGTTG-GTATTTTAGATGAA---TTCTTTCATTTAAATTTCTCCTTGTGATCTACTG-GCTTTACAGTGCATTTATCATGCTTCAATATTAGAACCTTTAGTTTGGG------GCTAACAGAAATAGTTCAGCTAATGAAAATAATGATTTTTTCATGCTGTACTACATGGTAATTTAAAGCATTTCAATTAAACAAACTGTCTCATTAGAGCTCCTTGATAATGTAGTTCCATTTGCTTTGATATGGTCAGAAATCCCAAGGATGCTTTTGGGATACTCTCTAACTCTCATATGAAC---TTGCTTAAGAATGTTACCATACACCAGACATTTTA-GAGTATTCAAATGACCTATTTTAAAAATGTTTGAAGCCATTTTATGGTGTGGACCCAGAACAAATTACCCTTATTTAATAAGTAGCTTTCAGTTTGTGTTCCAAAAGTCATCTGAATTCTACCA chr4 - 94230402 55205995 55205994 55206459 39023944 39023943 39024408 465 ATGTTCAAAGTACAGGGCTATATATTTTAAATAGAAACTCCTTTTAATAA--------CCTG-GATTTAATGCATTTTACAATGTATTTATTATCTCACACTGTGATATTTTGTAACTTAGATTTTCAGCTAACG--AGTAGCTCATCTAATAAAAATAATGATTTTTTCATGCTGTACTACATGGAAACTTAAAGTATTTCAATTAAACAAACCGCCTCATTAGTGTGCCTTGATAATATAGTTGAGCTTTCTTTGATATGGTCAGAAATATCTAGCATGCTTTTGGGATGCAATCAAACTCTCCAATAAACTTGTTGCTGAAGACAGCTGCCTAGCACCATGTATTTCCTGAACAGCCAAATGACCTAGTTTAGAAGTGTTTGAAGCCATCTTATGCAGTGGAAGACGAACAAATTAACCTTGTTTAACAAGTAGTTTTCAATTTGTGTTCCAGAGCTCTTCTGAGCTCTATCA .....:..:.:.x.:x.:.:-:.......:..::.---.:....:.x.x.--------.:..-...:..x..-::......:..:......:..x::x..x.:.x.x.x::.x..::..:.:------......:--.:...:...x.....:.................................x..:......:.................:.:........x.:x..........:.....xx::..x...................x:.x..x.............:.xx..x.......xx..:...---.....x....xx.:.:..xx:.....x::....:x-..::.x:...........x....:..:.............:.....xx.....xxxx..........x....:.....:......:.....:...........:.:x..x.....::....:.. 20M1I14M3I12M8D4M1D9M1I49M6I7M2D176M3I35M1I124M 341/450 75.8% 465/94230402 0.0% 26/450 5.8% 53371534 NA +3000 chr4 + 190214555 108585063 108585062 108585103 41 AGTTTTTTGTTTTTTTGTTTTGTTTTGTTTTTTTGTTAGAT chr4 - 94230402 28271107 28271106 28271147 65959256 65959255 65959296 41 AGTTTTGTGTTTTTTTGTTTTGTTTTTTTTTTTTGCCAAAT ......x...................x........::.:.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 80313956 NA +9237 chr4 + 190214555 108589520 108589519 108589704 185 CTCTTTAAATGATGAAAATAAAAAGTGATCAAAATAGATTTTTGTTATCCTTGGGGCATTGGGAGTTTAAACGCAAACTGCATGGCT--------------------------------TGCAGTGTGGAGAATTAATTATTGGTAATTGAAGTTGTAAGCTTAATTCCCTGCTTGCTTCAATGAAA--ATGAATCCTTTTATTTAATATTGAAATAAG chr4 - 94230402 55209106 55209105 55209324 39021079 39021078 39021297 219 CTCTTCATGTGATGAAAATAAAAAGTGATCAGGATAGATTTTTGCTATCCTCTGGGCATTAGAAGCTTAAATGCAAAATGCATGACTTATTATATCTAGCCAACTCTTAGGGGTAAATATGCAGTACGGGGAATTAGTTGTCGTTAATTGGACTTATGAGCTGAATTCCCAGGGTGCTGCGCTGAAAGCATACTCCCTTTGTTTTAATATTGAAACAGG .....:.x:......................::...........:......:x.......:.:..:.....:.....x......:..--------------------------------......::..:......:..:.:.x......:.x..:.:....x.......x.xx....x.:x.....--..:xx:.....xx.............:.:. 87M32I68M2I30M 145/185 78.4% 219/94230402 0.0% 34/185 18.4% 53380414 NA +3564 chr4 + 190214555 108591665 108591664 108591796 132 AAAAAAAGAAGAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAG--AAGAATGAGGAAAAAAAGAGAAAACACCGGA-------AAGGAGAGGAATAAAG ...x...:.:...........::.:.:....:.:...xx.x:.:....x..::.xxx:..:x.::..xx:..:x..--.:...x..:....:.....:.:..x.xx:..-------.....:..:..x.... 76M2D31M7D16M 80/123 65.0% 123/94230402 0.0% 9/123 7.3% 78058501 NA +3486 chr4 + 190214555 108591691 108591690 108591823 133 AGAGAAAGAGAGAGAAAGAAAGAAAGAGAGAGAGGGAGGGAGGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAAAAGAGAGAGAAGGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAA----------AAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:.x...:..::.........::.:.:......::..xx.x.:..----------...x..:::xxx....x.:.:.xx..:.x...:::.x.:::.:...:.:......x.xx.::.....:..:..x.... 45M10D78M 76/123 61.8% 123/94230402 0.0% 10/123 8.1% 78058527 NA +3019 chr4 + 190214555 108591774 108591773 108591831 58 GAGAGAGAAGGAAAGAAAGAAAGAAAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 21445989 21445988 21446046 72784357 72784356 72784414 58 GAAGGAGGAGGAGAACAGTAAAGAAAATAGTGAGAAGGAATGAGAAAAAGAGAAAGAG ..::...:....:.:x.:x........x..x.........x..:.:.....:.:.:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 87145785 NA +3708 chr4 + 190214555 108591785 108591784 108591932 148 AAAGAAAGAAAGAAAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAA--GAAAGAAAGAGAGAGAGAGAAGGAAAG------AAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 29503820 29503819 29503975 64726428 64726427 64726583 156 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAA .....::...:.........:.....x:.::..:....:...:.xxxx.x:....:........--...x:x..:x..x.:x:..x..:..:.------...xx.x...:..x.:..x...::.xx::..:.xxx.:..x..:::.x:.....::. 64M2I27M6I57M 92/148 62.2% 156/94230402 0.0% 8/148 5.4% 79087965 NA +3290 chr4 + 190214555 108591797 108591796 108591912 116 AAAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGA chr4 - 94230402 62511306 62511305 62511414 31718989 31718988 31719097 109 AAAAGATAAAGAA-------AAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGA ......x.:....-------..:....:....x...::.x.:x.:xx..x..:...x:.....::..:x...........x....:.:x..:.xx::x.:x.:xxx......:... 13M7D96M 71/109 65.1% 109/94230402 0.0% 7/109 6.4% 46080491 NA +3073 chr4 + 190214555 108591798 108591797 108591880 83 AAAGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .:.:.x..xx..x.....x...::...:.........:.x..x.:xx:..:.:.::.::::..x..:..x...:.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 71733504 NA +3520 chr4 + 190214555 108591800 108591799 108591979 180 AGAGAGAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG-------AAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGA----GAAAGAAAGAAAAAGAAAGAAAGAA-------------AGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 56098324 56098323 56098526 38131877 38131876 38132079 203 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAG--AGGGGGGAAAAAAGTCAAGA .....x.::x:.x....x..x:....:.:.x.:.::x..x....:::.x.-------:x.x.x......:x:::.x:..x..::.......:----..:..xx:.:....::xx.:....:-------------....:...-...:..xx.:....x.:...::...:....:.....x...--...::....::...xx.:.. 50M7I35M4I25M13I8M1I40M2D20M 112/178 62.9% 203/94230402 0.0% 27/178 15.2% 52493476 NA +3805 chr4 + 190214555 108591832 108591831 108591947 116 AAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAAGAAAGAAAGAG--AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-----AGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...:.:::.........::.:.:......:...xx.x:.:....x..::.--x....x.:.:.xx....x.:.::..x:.:....:.....:.:..-----::..:..:..:..x.... 54M2I44M5I18M 76/116 65.5% 123/94230402 0.0% 7/116 6.0% 78058668 NA +3189 chr4 + 190214555 108591860 108591859 108591940 81 AGAGAGAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA ...:...xx......:.......:.........:x::.x..:x:.......:x.x::.x....x:.:x...x...:..::. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 38338038 NA +3088 chr4 + 190214555 108591866 108591865 108591944 79 AGAAGGA--AAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA ....:..--.:....:.....:............x.:.x..:x:.......:x.x::.x....x:.:x...x...:..::. 7M2I72M 55/79 69.6% 81/94230402 0.0% 2/79 2.5% 38338044 NA +3309 chr4 + 190214555 108595444 108595443 108595502 59 CTCCCAGGTTCAAGCGTTTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGATGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::........:.:...x.xx.x........:..:.........:.:....x:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 90398305 NA +3103 chr4 + 190214555 108597257 108597256 108597293 37 TTGTTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTT chr4 - 94230402 54317743 54317742 54317779 39912624 39912623 39912660 37 TTGTCTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTT ....:......x......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 54279514 NA +3043 chr4 + 190214555 108597261 108597260 108597295 35 TTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG chr4 - 94230402 39858689 39858688 39858723 54371680 54371679 54371714 35 TTGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTG ..x................................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 68738572 NA +3057 chr4 + 190214555 108597261 108597260 108597293 33 TTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTT chr4 - 94230402 37883992 37883991 37884024 56346379 56346378 56346411 33 TTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 70713269 NA +3356 chr4 + 190214555 108597263 108597262 108597307 45 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGAGTTGGAGTCTC chr4 - 94230402 14581399 14581398 14581443 79648960 79648959 79649004 45 TTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTTGGATTATC .................................xx.....x.x.. 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 94015864 NA +3543 chr4 + 190214555 108600848 108600847 108600898 51 TGTATATGTGTATATATACGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ....x:.x........:..........:....x.x................ 51M 44/51 86.3% 51/94230402 0.0% 0/51 0.0% 60511351 NA +3159 chr4 + 190214555 108600850 108600849 108600900 51 TATATGTGTATATATACGTGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x..x.:.......::........:....x.x......:......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 60511353 NA +3674 chr4 + 190214555 108600852 108600851 108600933 82 TATGTGTATATATACGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATTTT--TTT---TTTTTTTGAGATAGAGTCT chr4 - 94230402 57691394 57691393 57691480 36538923 36538922 36539009 87 TAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAAGTTT ..x...:...:..:.x.......:..:x.........::..x....:x...x........--...---.......:.x..::...:. 60M2I3M3I19M 63/82 76.8% 87/94230402 0.0% 5/82 6.1% 50909458 NA +3099 chr4 + 190214555 108600853 108600852 108600901 49 ATGTGTATATATACGTGTGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..::.........xx.:.:x....................x:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 104194430 86020125 +3000 chr4 + 190214555 108600874 108600873 108600922 49 TGTGTGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882821 78347582 78347581 78347630 49 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTG ..x......................:..xx.:.:..xx.......:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 92718101 NA +3224 chr4 + 190214555 108600979 108600978 108601045 67 CTACAACCTCTGCCTCCCGGGTTCAAGCCATTCCCCTGCCTCAGCCTCTCAAGCAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA .....:..:xx:x..:.:.........:xx...x.xx.x........:.....:......:.:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 90403853 NA +3766 chr4 + 190214555 108604206 108604205 108604279 74 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCATTCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::........:.x...x..xxx........::...........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 90407080 NA +3516 chr4 + 190214555 108606011 108606010 108606069 59 CTCCTGGGTTCACGCCATTCTCCAGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx...x.x:.x........:............:......x.... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 90408872 NA +3488 chr4 + 190214555 108606568 108606567 108606626 59 CTCCTGGGCTCAAGTGATCCTCCAGCCTCAGACCCTCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:.......x.:.x.x:.x.....x.::............:......x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 90409429 NA +8915 chr4 + 190214555 108650647 108650646 108650862 216 GCCACCAACATGGAGACTTTGTACCGTGTCCCGTTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCGCCCTGGTTGCACATGCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATCACCGGAGGTAACTCGGGCTGTCGGGCCCGA---GAGGCTGAGGAGCGGAGAACTG-------ACCCGC--CCCGGGAGGCGCGTCTG chr4 - 94230402 55211928 55211927 55212151 39018252 39018251 39018475 224 GCCGCCGCCATGGAGACGCTGTTCCGGCTGCCCTTCGCCGTCCTCGAGTGCCCCAACATCAAGCTGAAGCGGCCGGGATGGGTTCACATGCCCTCTGCCATGACGGTCTACGCGCTGGTGGTGGTGTCGTACTTCCTCATCACCGGAGGTACC----GCTGCACGACGCGAGGGGAGGCCGCGGCGGGGCGGCCTGCAGAAATACCCGCGTGCCGGGAAGCTCCTCCG ...:..:x.........x:...x...xx.x..x...x:x..x.....:..:......x.x.........x:....xxx...x.x........x..x........x..x..:..x..............x......................x.----....:xx.:.x...---.....:.x..x.x..x.:x...-------......--x......:..x.x..:. 153M4D14M3I22M7I6M2I17M 162/212 76.4% 224/94230402 0.0% 16/212 7.5% 53438719 NA +13860 chr4 + 190214555 108657435 108657434 108657658 224 TCTTTTCTTTTCC---AGAGTAAATGGACAATATATTATGGAAGGACTTGCATCCAGCTTCCTATTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATCGAATGCACCAAATATCCCAAAACTCAATAGATTCCTTCTTCTGTTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCATGGCTAGAGTATTCATGAGAATGAAACTGCCGTAAGTTATTT chr4 - 94230402 55214462 55214461 55214688 39015715 39015714 39015941 227 TCTTTTCTTCTCCTGTAGAGTAAATGGACCATATATAATGGAACGGCTCGCATCTAGCTTCCTGTTCACCATGGGTGGCTTAGGATTCATAATTTTGGATCGATCCAATGCACCGAATATCCCCAAGCTGAATACGTTTCTCCTGCTCTTCATTGGATTTGTCAGCGTGCTTTTGAGCTTCTTCATGGCCAGAGTTTTCATGAGGATGAAATTACCGTAAGTGGCTT .........:...---.............x......x......x.:..:.....:........:..:..x.....x..:.....x........::....:.....x........:........x..:..x....x:..:..:..x..x...........:...x.:..x..x.....:..:........:.....x........:......:.:........x::.. 13M3I211M 182/224 81.2% 227/94230402 0.0% 3/224 1.3% 53442973 NA +3179 chr4 + 190214555 108668697 108668696 108668773 77 ACTTAAAAGACTTGATTCAATAGTAAGAACTTTTTGGTTTGTTTTTTGTTTTTTGGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56587238 56587237 56587314 37643089 37643088 37643165 77 ACTTCATATTCATGATTTTGAATCAGTAACTTTTCAGTTTGTTTTTTGTTTGTTTGTTTTTACTTTGTTTTGCTTTT ....x.x.xx.x.....:x:x.x:.:x.......::...............x..x......x:...x....x:.... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 52081459 NA +3106 chr4 + 190214555 108671130 108671129 108671201 72 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTTGCCTGCCTCAGCCTCCCAAGTAGCTGG-ATTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..:.::..........x..::.xx.x........::...........-.:....x.::.. 60M1I12M 51/72 70.8% 73/94230402 0.0% 1/72 1.4% 90474004 NA +3226 chr4 + 190214555 108674666 108674665 108674748 83 GAAGGAAGGAAGGAAAGGGAGGGAGGGAGGGAAGGAGGGGAGGGAAGGGAGGGAGGGAGGGAAAGAAGGAAGGAAGGAAGGAA chr4 - 94230402 40465778 40465777 40465860 53764543 53764542 53764625 83 GAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAA .....:.x..x:::..x.:::::...x..:....x.:...::::x:..x:x...............:.:.....::.::.:.. 83M 51/83 61.4% 83/94230402 0.0% 0/83 0.0% 68208888 NA +3556 chr4 + 190214555 108675635 108675634 108675758 124 AAATTGTATATTGTATACATTTACAGTGTACA---ACATGAT---GTGCATATATATATATATATATATACACACACACACACACACACACACATTGTGGAATGGCTATGCAAGCTA-----ATTAATGTGTGAA chr4 - 94230402 14964791 14964790 14964924 79265479 79265478 79265612 134 AAAGTGCAT-TTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAATAGGACAGCTACAGCTATCAATCTGTAGA ...x..:..-..:....x.xx.::x...x...---.:...x.---...:::.:.::.:...:......:.xx........::............:...x..x..:x..x.xx.....-----..:...x...::. 9M1D22M3I7M3I72M5I13M 86/123 69.9% 134/94230402 0.0% 12/123 9.8% 93710844 NA +3199 chr4 + 190214555 108675673 108675672 108675721 49 TGTGCATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964836 14964835 14964884 79265519 79265518 79265567 49 TGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......:.::.:...:......:.xx........::............. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 93710837 NA +3694 chr4 + 190214555 108685979 108685978 108686048 70 CTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGCACCGCCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.::..........x...x..x.x........::.:.........:......--.::.....:.::.. 54M2D14M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 90488840 NA +3134 chr4 + 190214555 108691560 108691559 108691654 95 ATAGGTTCTTAAACTCTTGGAGATTACATTCAAGAT-TATATATATATATATATATATGTGTGTGTGTGTGTGTATATACATATGTATATATATAC chr4 - 94230402 17520723 17520722 17520812 76709591 76709590 76709680 90 ATATGTTCTTAAAAT------GCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.........x.------.xx.x..x....x.x-......x.:.:.x...:.:..:::....x:..:x......x...:...:.......... 15M6D15M1I59M 65/89 73.0% 90/94230402 0.0% 7/89 7.9% 91170837 NA +3060 chr4 + 190214555 108691592 108691591 108691642 51 AGATTATATATATATATATATATATGTGTGTGTGTGTGTGTATATACATAT chr4 - 94230402 4406420 4406419 4406470 89823933 89823932 89823983 51 AGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATAT ...x..::........xx....x:...................x:.:.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 104285172 85929383 +3214 chr4 + 190214555 108691597 108691596 108691645 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTATATACATATGTA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x................:...x.....:.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 104285174 85929381 +3084 chr4 + 190214555 108691606 108691605 108691638 33 TATATATATATGTGTGTGTGTGTGTGTATATAC chr4 - 94230402 27034826 27034825 27034858 67195545 67195544 67195577 33 TATATATATATGTGTGTGTGTGTGTGTATATAC ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 81656780 NA +3760 chr4 + 190214555 108691659 108691658 108691854 196 ACACATATGTGTGTGTATATATGTATATATGTATGTATATACACACACACATATATA----------------------------TGTGTATATATATAAAATATATACACATATATATGTGTATATAAAATATATATATACACACATCTAGATGTGTGTATAAAATATATACACACATCTATATATATACACATATATATAT---ACACATATATATAAAATATAT chr4 - 94230402 25393253 25393252 25393461 68836942 68836941 68837150 209 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtag---gtatgtatgtatgtatataCACATGAACTGTAACTATCCACA---------------GCAAAATACTTGCAAACTTCTGATCAGAAAGGCACATAACTGTGaaaaaaatatatattaagaatat .:.x.x.......::.:.:.......:...x.:...:..:..........::.:.::----------------------------..:..:.:.:.:..:---:...::.::...:...:.::.:..:..x.:..xx...x....---------------::......:x.:..x..x...:xx:.x.x.x:..:...xx.:.---.x.x........x..:x.... 57M28I15M3D42M15D43M3I21M 115/178 64.6% 209/94230402 0.0% 49/178 27.5% 83298406 NA +3338 chr4 + 190214555 108691703 108691702 108691801 99 ACACACATATATATGTGTATATATATAAAATATATACA--CATATATATGTGTATATAAAATATATATATACACACATCTAGATGTGTGTATAAAATATAT chr4 - 94230402 78881517 78881516 78881617 15348786 15348785 15348886 101 ATACACATATTGAAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATAGAACACAT .:........xx.x:.x.....x.::..x..::x.x..--..x.:....x....x....xxx.......:.:.....xx..x..:.:......:..:.:.. 38M2I61M 68/99 68.7% 101/94230402 0.0% 2/99 2.0% 29810186 NA +3733 chr4 + 190214555 108691838 108691837 108691941 104 ATATATATAAAATATATATAC----ACATATATATAAAATATATATACACACATATATGTGTGTATATAAA----ATATATATACACACATATATGTGTGTATATAAAATAT chr4 - 94230402 78881506 78881505 78881617 15348786 15348785 15348897 112 ATACAGACAAAATACACATATTGAAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATAGAACACAT ...:.x.:......:.:...:----.:x.....x.:x.....::x.x..x...x.:..:.x....x....x----.....:.......x......:.:......x..x.:.. 21M4I46M4I37M 75/104 72.1% 112/94230402 0.0% 8/104 7.7% 29810332 NA +3605 chr4 + 190214555 108691861 108691860 108691974 114 ATATATATAAAATATATATACACACATATATGTGTGTATATAAAATATATATACACACATATATGTGTGTATATAAA----ATATATATACACACATATATGTGTGTATATAAAATAT chr4 - 94230402 78881506 78881505 78881617 15348786 15348785 15348897 112 ATACAGACAAAATACACATATTGAAATTTATATCTGCA------ATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATAGAACACAT ...:.x.:......:.:...:xx.x..x...:.x..:.------....::x.x..x...x.:..:.x....x....x----.....:.......x......:.:......x..x.:.. 38M6D33M4I37M 77/108 71.3% 112/94230402 0.0% 10/108 9.3% 29810355 NA +3044 chr4 + 190214555 108698032 108698031 108698080 49 CTGTCTCAAAAGAAAAAAAAAAAAAAAAAAGAACTGATAATCTCCTAAA chr4 - 94230402 88007419 88007418 88007467 6222936 6222935 6222984 49 CTGCCTAAGAAGAAAGAAAGAAAAAAAAAAAAACTGATAAATTACTGAA ...:..x.:......:...:..........:.........x:.x..:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 20690613 NA +3261 chr4 + 190214555 108707794 108707793 108707860 67 CCTTTTCTCATTCTATGAAATTTTCTTTCTCTTTTTTTCTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 63275374 63275373 63275440 30954963 30954962 30955029 67 CTCTTTCCTTTTTCATGAGGGTTCCTTCCTCTAATGTTCTTTTTTTTTTTTTCTTTTTGAACTTGAG .::....::x..::....::x..:...:....xx.x................:.......:x.x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 45432420 NA +3541 chr4 + 190214555 108717074 108717073 108717186 113 TACGTATACATATACATATACATATACATATA--------CATATACATATACATATAC----ATATACATATACATACACATATACATACACATATACATGTATATAAATATATGTATGTATTT chr4 - 94230402 73121102 73121101 73121226 21109177 21109176 21109301 125 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTT .::.:..:.....x....:.........:.x.--------:.:....:....x:..:..----....:::x:......:.x...::.x:...x.x.:...::.:.....::.x..x.x:x..... 32M8I19M4I62M 75/113 66.4% 125/94230402 0.0% 12/113 10.6% 35595972 NA +3011 chr4 + 190214555 108717097 108717096 108717177 81 ATACATATACATATACATATACATATACATATACATATACATACACATATACATACACATATACATGTATATAAATATATG chr4 - 94230402 89016082 89016081 89016162 5214241 5214240 5214321 81 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTG ..::::.:....x.:...::...:.:..:.x.:.::.:...:.::..x..:.......:..x.::...:.::.:.:.:x.. 81M 48/81 59.3% 81/94230402 0.0% 0/81 0.0% 19701015 NA +3140 chr4 + 190214555 108717115 108717114 108717183 69 ATACATATACATATACATATACATACACATATACATACACATATACATGTATATAAATATATGTATGTA chr4 - 94230402 73121107 73121106 73121175 21109228 21109227 21109296 69 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTA ..:.....x....:.........:.x.x::..:x:....:.::..:.x...:.::.:.......:x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 35596008 NA +3320 chr4 + 190214555 108734386 108734385 108734484 99 AAATACTCAAATATATTCCAAAGAAAGCAAGAAAGGAGAGAAAAAGGAGAAAGGAACAAATAGAACAAATGATCA----TTAATAAAAAAGATATATTTAAAT chr4 - 94230402 65643046 65643045 65643143 28587260 28587259 28587357 98 AAATGCTTAAATGTTTGAAAGTGAAAATGAGAAGGAACATAGTAAGAAAAAAGGGATAAAAAGAACAAATGATTAACATTTAATCAAATGG-----TTTAAAT ....:..:....:.x.xxx.:x....:::....:.:.x.x.:x...:.:.....:.:...x............:.----.....x...x:.-----....... 75M4I12M5D7M 67/94 71.3% 98/94230402 0.0% 9/94 9.6% 43091340 NA +9384 chr4 + 190214555 108746393 108746392 108746870 478 ACCCACCTGTTAGAATCCTATCAAGTTGGTCCACCATGAACTTTGCATCTTCTTCAGTGAAGCACATAGGTGGTTTTATTTTAAGTACATTTCTATGAGGTCCATCGGCACTGAGAAGCACTCGTTTTTCTTTCATCCTAATTTGTGTAGGAAATACATGTGAGTGTATGCAAAGGATAACTACGATTACTGAAGAATTATGTGAACATAGAGC--AGTTTAAGTATTCTGCA-----TTTAAGAAGCCCAC-ATTATAAATAGGATGTATTTAAACTTTCCTTTTTCAGAGGGATGGGAGGAAGTCAAGCAAGCTTTCAAGTGGGTAGGCATCCTGCAGCCAAGATACCAAACAGGTGGGTGTGGGGGTGAATTACTTGTAGATGATGTGCTGAGCTTCAGCTGTGGCAGGGGTCCTTTTCAGATGGTCCTTCACTAAATCAATTCCAATAAAAAGGCCAATGCCCCTGCGAGAGGTGAAGAAAA chr4 - 94230402 55258450 55258449 55258894 38971509 38971508 38971953 445 ACATACCTGTGAGAAGTACATCAATTTTCTCCACTACATGTTTTGCATCTTCCATAGTGAAACACATTGGTGGTTTAAATTTTAGTATATTTCTGTAGGGTCCATCTGCACTAAGAAGGATTTTCTGCTCTTTCAGCCTA--------TGGAAAGA---GGGAGCATCTGTTAATAAACAGTTCAACAACTACATGGTGTCCTGTCCTTTAGGCCAAATTCA---ATTTTGAAAGCTTTTCTAATAGCATGCTATCACAAGCTACATGAATTTGAACTG---------AAATTAATGAGTAACTGCTAGGGAA--TATTAGGAGGGTTTGATCACTGCATGCAGTCTTTAGAAAATAT---------------TTACTTGTAAATGAGGTGAAGGGCTTCAGCTGTGGCTGGTGTTCTCTTTTGTTGATCCTTCACCAAATCCACACCAACAAACAATCCCACGCCTCTG-GAGAAGAGAATAAAA ..x:......x....x:x:.....x..xx.....:.::x::...........:x:......:.....x........x.x...x....:......:.::........x.....:.....x.:.:x:.x:.......x....--------x.....x.---.x...::.x..:x..x:.xx.x.x.:.:x...:x.x::.xx:x..xx.x.x::..--.:..:.---...:..x.-----..:x.:x...x::.-..:.:..::x:x...x....:....x---------.:.xx:...:.x::xx.::.:.x..--.x.:.:.x....xx.xx:x.....xx..:xx.x:x:..x.x:.---------------.........:....x...xx.:..............x..x..:..:..:x.x..:........:.....x.:x....:...x.:x..x.:...:...-....:.x...x.... 140M8D8M3D55M2I6M3D8M5I14M1I26M9D25M2D43M15D97M1D15M 283/437 64.8% 445/94230402 0.0% 49/437 11.2% 53487943 NA +3496 chr4 + 190214555 108747119 108747118 108747174 56 TAACATTATATATATATATATATATATATAATATATATATATATATTATATATATA chr4 - 94230402 20751401 20751400 20751456 73478947 73478946 73479002 56 TAACATTAGTTATGTAAGTATACATATATGACATATATATATATATTATACACGTA ........xx...:..x:....:......:.:..................:.::.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 87995718 NA +3303 chr4 + 190214555 108747137 108747136 108747209 73 TATATATATATAATATATATATATATATTATATATATATATATAATATATATATATATTATATATATATATAA chr4 - 94230402 56330040 56330039 56330112 37900291 37900290 37900363 73 TATGTGGGTGTAATATATACATACATATTATATACACACATATGTAGTATAGATTTGTTATGCGCTTATATGA ...:.:x:.:.........:...:..........:.:.:....:xx:....x..x.:....::::x.....:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 52417097 NA +3142 chr4 + 190214555 108747143 108747142 108747191 49 TATATAATATATATATATATATTATATATATATATATAATATATATATA chr4 - 94230402 15418490 15418489 15418538 78811865 78811864 78811913 49 TATATAAGATATATATATCTATCATATATATACATAAGAGATATATACA .......x..........x...:.........:...x:.x.......:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 93328653 NA +3142 chr4 + 190214555 108747173 108747172 108747221 49 TATATATAATATATATATATATTATATATATATATAATATATATATATA chr4 - 94230402 15418490 15418489 15418538 78811865 78811864 78811913 49 TATATAAGATATATATATCTATCATATATATACATAAGAGATATATACA ......x:..........x...:.........:....x.x.......:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 93328683 NA +3343 chr4 + 190214555 108747197 108747196 108747268 72 TATATATATATAATATATATATATATATTATATATATATATATAATATATATATATATTATATATATATATG chr4 - 94230402 56330040 56330039 56330111 37900292 37900291 37900363 72 TATGTGGGTGTAATATATACATACATATTATATACACACATATGTAGTATAGATTTGTTATGCGCTTATATG ...:.:x:.:.........:...:..........:.:.:....:xx:....x..x.:....::::x...... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 52417157 NA +3348 chr4 + 190214555 108747804 108747803 108747885 82 CTGCAACCTCTGCCTCCCAGGCTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTATTTGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..:xx:x..:.::..:.......x...x..x.x........::.:.........:....:x:...-----...... 71M5D6M 55/77 71.4% 77/94230402 0.0% 5/77 6.5% 90550678 NA +8794 chr4 + 190214555 108747991 108747990 108748187 197 CATAATGAACATACCTAATATCTCCTATCAAAGTGTGTTTAGCCTTCTGTTTTTTCAGTAACTCAGTGAGATAATTCCCTACTCTCTTGGCATTTCCTTGAAGGTCTTCATTTTCAATTATATCCAGGACAGCCAAACCAACAGCACAAGATACTGGATTTCCTCCATACTG-TAAAAAAAAAAAAGACAAATGAGAA chr4 - 94230402 55259438 55259437 55259635 38970768 38970767 38970965 198 CATGAGACACCTACCTGATATCTCCCACTAAGGGATGCTTCTTCTTTTGTTCAACCAGCAGTTCTAGGAGGTAGCTTCCTACACGCATAGCGTTTCCCTGGAGATCTTCTTTTTCGATTACATCCAGTACAGCCAAGCCAATAGCGCAAGACACAGGATTGCCTCCAAACTGATAGTAAAAACAATGGGAAAACAGAA ...:.x:x..x.....:........:.::..:.x:..:..xx:...:....:xx:...:.::..x:x...:..::.:.....x.x.x.:..:.....:..:..:.....x.....:....:......x........:....:...:.....:..x.....x......x....-..:x.....x..x.:x...xx.... 172M1I25M 139/197 70.6% 198/94230402 0.0% 1/197 0.5% 53488553 NA +14453 chr4 + 190214555 108749230 108749229 108749470 241 AAATGTACCGTATTAAAATATTCCATCCCAGAGCTGCTGAAGGCTTCTGCAATTTCTTTGGTTGTTACCACACATGCCACCGGGTGGCCGTTGCCCATCGGTTTTCCCATTGTGACGATGTCTGGAACAAAGTCTTCACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACATATCTGAAAA chr4 - 94230402 55260434 55260433 55260674 38969729 38969728 38969969 241 AAACTTACTGTATTGAAATACTCCAGTCCAGAGGCACCAAACTTTTCAGCAATTTCCCTTGTTGTGACCACACAAGACATAGGGTGGCCATTGCCAATGGGCTTTCCCATGGTGACGATGTCAGGCACAAAATCTTCACCTTGCAGCTGGAAAGCCCAGAAATGCTTCCCAACTCTGCCGAAGCCAACCTGGACCTCATCAGCTATGAATACACCCCCCGCTGCATGCACATACCTGAAAA ...:x...:.....:.....:....x:......x::.::..xx:...x........::.x.....x........x.x..:x........:.....x..x..:........x...........x..x.....:........x.:..x......:x:.........:..............:.....x..:..:..:...........:..:........:..xx.:..:.....:....... 241M 189/241 78.4% 241/94230402 0.0% 0/241 0.0% 53488796 NA +7268 chr4 + 190214555 108750909 108750908 108751033 125 CCAAGGAGGCCC-----AAGTCAAGTACATACTCTGCCACTTTCTGGAAGTAGCCTGCTGGAGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTATACAAGAGAAGA chr4 - 94230402 55261579 55261578 55261708 38968695 38968694 38968824 130 CCAGGTATGCCCTTCTGAAGTGATGTACATACTCTGCCACTTTCTGGAAATAGCCCACAGGTGGAATTACTTGGCCTCCACAGCTCTGCATGGATTCGGCTATGAAAGCAGCAATCTAAAAAAAAACAAA ...:.x.x....-----....x.x.........................:.....::.x..x.......:...x..x.....:..............:..x..:..:...........x.x..:.:x.:. 12M5I113M 101/125 80.8% 130/94230402 0.0% 5/125 4.0% 53489330 NA +8396 chr4 + 190214555 108752718 108752717 108753024 307 CTTAGAGGCATGATTGTAATAACGCATTTTTGAAA----------TTTGAATCAAGTGAAAACGTAACTAGAGAAGAACAGAAAGGGACATTAGATATAATCCTTTTCCATCTCTTCAGTGAATCCCAACAGTTTTAATCCCTTTTATAAAAGATGTTGAGATGTTTCCAAAGCTATAAATACAAACCTTCCTTCCACTGTTATGAGCATCTTCAATGATTTTCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCTGAAAACATCAA chr4 - 94230402 55263228 55263227 55263515 38966888 38966887 38967175 288 CCTAGAAAAATTATGATAAGAGCGTCTGGTTGAAAAATGGCACATTTTGAACACAGAGGAAAC-TAAGCAGAG-------GAATATGTCTTTAGTT----TCCTGTTTCATGCCCCCA--------------TTTTA---CACTTAGTAGATGAAACTTCAGCATTTCTAGAGCACAAGATACACACCTTGCGTCCATTCTTCTGTGTTTCCTCAATAATCTTTTTCACCTCTTCAGCATAAGCGCTTGCTGGGTCTGGGTGGTCTTCCCTATATTTCCCTCTATAGATATCTGGAGAAGGAGCCTGAAAAGACCAA .:....::x..x..x:...x.:..:x.xx......----------......:xx..x.:....-...x:....-------...x:x.x.x....x.----....x..:...x:.::..--------------.....---.x:..x:..:.x..x::.xx::::....:.:...xxx.:.....x.....x.x....:.x..x..x.:x..:.....:..:..:.....:..x..x........:..x....:.....x:........:........:.....:..::.........xx..x.........x.:... 35M10I18M1D9M7D16M4D18M14D5M3D177M 194/278 69.8% 288/94230402 0.0% 39/278 14.0% 53489490 NA +3474 chr4 + 190214555 108753735 108753734 108753848 114 CCGTCTCAAATAAATAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAA-------AAGAAAAAAAGAAATTATACTGTTCCT chr4 - 94230402 36858270 36858269 36858390 57372013 57372012 57372133 121 CTGCCTGAAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTTCTT .:.:..x.....xx...x..x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx....:..::.::..:.-------.......:..:..:::.xxx.....:. 87M7I27M 74/114 64.9% 121/94230402 0.0% 7/114 6.1% 71895465 NA +3315 chr4 + 190214555 108753753 108753752 108753822 70 AAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....::..x:.x...:..--::..x.::.::.:..:..............x........... 28M2I42M 52/70 74.3% 72/94230402 0.0% 2/70 2.9% 83686768 NA +3037 chr4 + 190214555 108753766 108753765 108753829 64 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAAAGAAAAA chr4 - 94230402 28315469 28315468 28315532 65914871 65914870 65914934 64 AAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGGAAAGAACAA ....x.:...:.x.:..x:...x.:x....:x...:...x...........x..:......x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 80438297 NA +3381 chr4 + 190214555 108754049 108754048 108754120 72 CTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCTCAAGTTGCTGGGACTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.::........:.x...x.xx.x........:......x.....:......x.::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 90556923 NA +4868 chr4 + 190214555 108756412 108756411 108756494 83 ACTTACTGGTCAAGAGTGATCACATCCTGGTGGCCTCTGAACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCT chr4 - 94230402 55266361 55266360 55266443 38963960 38963959 38964042 83 ACTTACTTTTCAAGGGTGATCACATCTTGGTGTCCGTGGTACTGCCGGGCCAGTCGTAAAGCCAGATCATTTGCTTCAGACCT .......xx.....:...........:.....x..x:x.x.......:.....x.....:..:.::..:..x.....:..:.. 83M 64/83 77.1% 83/94230402 0.0% 0/83 0.0% 53490051 NA +13241 chr4 + 190214555 108759732 108759731 108760375 644 GAAACCATGAAGCATACCCTGAATTTGTAAAATAACAAACAGAGAGTTTCTCCGGCAGAGTTGCTGAAAGGCGTTTGGCATACTCAACAATGTTGTCGTGGAGGAATCGAGAATTTGTATTTAGCAGTTCCATCTGTTTCAGGGCAGCTTTGACCACTCCTGGGTGACAGTGTCCCACTAAAATTTATGAAACAAAAGCCCAAGAAATAAGTTAGAATTCTAAGTGCCTGGGAATAAGAGGAATTATGAAGCAAGCAAGCAAGCAAACAAACAAACAAACAAAAGTTGAGTTCCTTTCTCTTCCATATTTTGCTGCGATTTTCCCCACTAGGACTACTGGCCCACTCAGCAAAGGAACTGCAGCCACTGCAATTCCCCAAACAAAAATTAAGTGTTCCAAGTCAGCTTTACTCCATGAACATTTCCTCCAAAGCACTGCAAGGACAGGACATTTACCATGGGCAACATTGTTGATGCAGTCCAAGTACTGTTCACCGTTCTCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTTGATGGGATCCGATGCAAAGAAAACTTTGCATGAGGGCCTAGAAATAATCAAAGGA--------------AACACTTTGGTCTGGTAGGACTACTCTCAGTATTTTTCCTTCTCAATGAAG chr4 - 94230402 55267245 55267244 55267771 38962632 38962631 38963158 527 GAAATGAGTAGACCTACCCAGAGTTAACAAAATAGCAAACAGAGAGTTTCTCTGGCAGGGTAGCAGTAAGACGCTGAGCGTACTGAACAAGGTTGTCATGCAGGAACCGGGAATTTGTATTGAGCAGTTCCATCTGTTTTGTTGCAGCCTTTGTCACGTAGGGATGACTGTGGCCAACTGAAG------------------AAGAAAACAGT--GAATGCT----------------------------AGCAAACAGTCACTGAGCCACAAAAGGAGAC-TGAGAGGAGCCCTGTGATCCTAGCACTGTCGCTTGGAACAAGTGCATTAGGATTCCT---------ATTAGAGG---TGAAGC---------------AACAGAAG---------------CACTCTTAC-----------------------------AAGATAAACTGCTTACCGTGTGCAACATTGTTGATACAGTCTAAGTATTTTTCTCCAGTCTCATCAAACATATACTGGCCCTGAGCACGGACTATCTTCAGAGGGTCCTTGGCAAAGAAAACTTTGCAGGAAGGCCTAAAAAAAAAAAAAAAAGTGTGTAAAATAACACCATTTTAGTT-----------CTCTGAGGAGTTCCCCCTCCCAGAGAAG ....:x.xx.::.x.....x..:..x::......:.................:.....:..x..x.x...:..:.x:..:....x.....x......:..x.....:..:...........x.................::xx.....:..x::...x:xx..:....x...x..x...:..:------------------......xx...--....x..----------------------------.....:..:x..xxx.:x..x.x..:x.:..-x:..xx...::.:x.xx..:.xxxxx.x.:...xx..x:xxx:x..:.....:.x..---------.x:.:...---..x...---------------....:..:---------------..x::....-----------------------------.:..:.::x:::.....:..x..............:.....:.....:.x...x..:x.............:.....x.:...:..x.xx.....:..x.x:..:...xxx.................x..:......:...x..xx...::.--------------.x..:...:..:-----------....x..x.x..::..:..:..:x.... 183M18D11M2D7M28D31M1D57M9D8M3D6M15D8M15D9M29D153M14I12M11D28M 357/513 69.6% 527/94230402 0.0% 145/513 28.3% 53492487 NA +4877 chr4 + 190214555 108762814 108762813 108763012 199 CACTTACTTCCGGGCCAGGGTGCCCTTACCCGATGTGCTTCTTCCTCAGCCCCAGAGTGTCCCGCTTACTGTACAGCTCGCACATGGTGGCGGG--GTGCAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTGCGCGCCTCCTACGCGAGCCTGGGACTGCCTTGGCGGCCCCGGCCGGCCTTCCTCCCGTTATCCCTCCT chr4 - 94230402 55268922 55268921 55269112 38961291 38961290 38961481 191 CACTCCCTCCCGCCCCAC--CGCCCCTACCCGATGTGCTTCCTCCGCAGCGCCAGGGTCTCCGCCTTGCTGTAGCGCTCCTCCATCCCGCCCGGCATGGCACGGCGCGGCACGGG----AAGCCCAGGGGCTCCCCGCCTCTTAT----CCCGGAGCCGGCTTCGCCAAAcccctcctccttcccaccctctctccctcct ....:x..:...xx...x--:....:...............:...x....x....:..x...xx...:.....xx....x:x...xx:.x.x..--xx...x.....x..:x:..----.:.:x..:..x..x.x......:..:----x..x.:.x.x..:.:.x.::x...xx..xx.:.:..x...x:.x........ 18M2D74M2I19M4D26M4D52M 126/189 66.7% 191/94230402 0.0% 12/189 6.3% 53493892 NA +3232 chr4 + 190214555 108763764 108763763 108763820 57 AAATATGTGCACAGGTAGAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 3683803 3683802 3683859 90546544 90546543 90546600 57 AAATAAGTGCTGAAGTAAAAACTCATTTTTTTTTCTTTTCTTTTGTTTTGTTTTTAA .....x....xx.:...:.....:x.........:....:....x....x.....:. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 105079961 85134594 +3378 chr4 + 190214555 108769285 108769284 108769373 89 CTTTAAAAAAAAAAAAAAAGGAAAGAAAGAAAACAGAAATTTAAATCTGTGTCCATGAATA-AAGTTTTATTGGAACATAGCCATGGTCA chr4 - 94230402 36762575 36762574 36762664 57467739 57467738 57467828 90 CTTTAAAAAAAAAAAAAAAAGAAAGGGAAAATACAGAAATTTCAAACCATTAACATGCTTATGAGTAATACTGAATCCCACCCTTAGTTA ...................:.....::.:..x..........x..x.::.xxx....xx..-:...xx..:..:.x.x:.x..x.:..:. 61M1I28M 63/89 70.8% 90/94230402 0.0% 1/89 1.1% 72006710 NA +3653 chr4 + 190214555 108772230 108772229 108772303 74 CTGCAACTTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.::xx.x..:.::........:.x...x.xx.x........::.:.........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 90575104 NA +3020 chr4 + 190214555 108779674 108779673 108779740 67 AGAGTTAGAGGGCTTGGGTTCAAGTCCTGACTCTGAGCTTACTTTTGTGGCCTTGATCAAATCACTT chr4 - 94230402 82310219 82310218 82310285 11920118 11920117 11920184 67 AGGCTTGGGATGCCTGGGCTGAATTTCTGACCCTGAACTGATCCATGTGACATTGAGCAAATCACTT ..:x..:.::x..:....:.x..x.:.....:....:..x.:::x....:.x....x.......... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 26469455 NA +4206 chr4 + 190214555 108782163 108782162 108782241 79 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:...........:.x...x.xx.x.........:...........:......--.:........ 67M2D10M 61/77 79.2% 77/94230402 0.0% 2/77 2.6% 90585037 NA +3732 chr4 + 190214555 108783280 108783279 108783364 85 TTCTGAAACCTCCATCCCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGAATGCGCCACCATG chr4 - 94230402 18197124 18197123 18197206 76033197 76033196 76033279 83 TTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ....:x.:..:xx.x.::.:.........:.x...x.xx.x........:..:.........:......x.--...:....::.. 71M2D12M 60/83 72.3% 83/94230402 0.0% 2/83 2.4% 90586156 NA +3029 chr4 + 190214555 108795623 108795622 108795676 54 TCTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAATAGCCTAATTGGCTCCAGT chr4 - 94230402 69939456 69939455 69939509 24290894 24290893 24290947 54 TCCCTTCCTCAAAAAAAAAAAAAAAAAGCACAAAGCAGCTTAATTAGTCCTAAT ..:..x:....................:x.x...::...:.....:.::.:.:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 38856167 NA +3075 chr4 + 190214555 108800878 108800877 108800953 76 TTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTGATTTTTGAGAC chr4 - 94230402 61029244 61029243 61029319 33201084 33201083 33201159 76 TTTACTTATTTCTTCTAGCTTACTTATTTCTTTTTTTTTTTTTTTTTTCCCTCAAATGCTTACTGACTTGGGAAAC ...x:..x:..:....xx...x...x...:..................xxxx..:.xx..:.....:..xx..:.. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 47771634 NA +26302 chr4 + 190214555 108808725 108808724 108809602 878 TTTTCATGAACATCAATAAAGCTTTATAACAATACAATTCATTATCATTGTTTGGATTAATATTGTAATAATTACACACTTTTTACATTATGAAAATAAGTCATAAATAGTGTAAAAATAATTCTGAAGATCAACTTCTCACAAACTAGGAACCCTGAAAACAAATTTAAAAAGCAAATAAAAACA-----------AACTGGAAACTGAACACAATGCAATTATCTCCAAACCGCAAATCAAAAATCTTATGCATCTTTTGATACAGTAATGTCAGCTGGAGAAATTACAAGGAAATTAAAAT-----AAAAATTGAACAGGGAGAATTCAATCTTTCAATTATTTACACTACTGAGATAAACAGGTTTGTGCCATATTTACAGTGATAAGACACAACACATTCTTAGAATAATCAATTGTATGAGACTGGCCCACAAA-------------------CATTTAAAAAAATATGCAGTGTAATGCTTGCCAAAATATTTTTTTTTGCATATT-TCACTTATTTTGTATTTATGTGAGTTTTTGGCAATATAAAAATAGCTGCACATAGAGATGAACTTTAAAATGTAAAAAATACAAATAAAA--ATATAATATTTTCTAAAG--AAAAATCAGATACATACATCTTTTAAAATGTTATTAAGTTGAATG----------AAACATTTACAACAGTATAAAGAATATTCACATAAATGTCAACAGTATGTAAGACATTCTTTTGTGAATCCAATTCGT--TAATATTTCTGAGATAGGTAAGAATATCAACTACATTTTGAGAGATGTTGGTACTTTCTTTGTTAAGTTG---TTAATAAATCACACATAACGGT-TTAGGTTGAA--AAAGTCTTCTTATGCCCAAAAGGACGGTTCTTTCAATAAGCAGCATAGGCAATTTTATACATTTAAA chr4 - 94230402 55275827 55275826 55276713 38953690 38953689 38954576 887 TTTGCAGCAACACAAAGAA--CTTTGTTACTATGCAAATCAGCACCAATAATTGAATTGATATTTTAATAATTACACACTTTTTACATTATGAAAATAAATCATAAATAGTGTAAAAATAATTCTGAAGATCAACTTCTCACAAGCAAGAAAC---AAAATCCAAAGTACAAAACTAAGGAAAACAAAACAGCATACAACTGAAAAAC-AACAAGGAGAAATTTTAATAATA----AAAACAAAAGCATGCTGTTTGATCAGGTTCAATTAAGTCAGGACCAGAGGCCACGATAAAGTGGTAATTAATGACAAATTAAA------------AACCTTGCAATTCTTTACGCAACTCA-----------TTGTGACATATTTACAGGGCTAAGACACTCCAAATATTTATAG-GATTGATAATGTGGTACTGACCTATGTATCCCCCCGCCCTCCCCCCCCACCCAAA-------GCAGTGTAATCCTTGCCAAATTACTTTTCATTGTATTTTATCTCCTCTACTGCATTTATGAGACCACTT-GCAATACAAAAATAACTGCACATATAGATGAACttaaaaaagtaaaaaatacaaataaaaatatataatattttCCAAAGGAAAAAGTCAGATACATACATCTTTGTAACATTTTTAAAGTTGTGTGATATTTTCCCAAACATGTACAATAATAT-AAGAATATCCACATATATGTTAACAATATGTAAAACATCCTTCCACCAGCCCAGCTCTTCATAATACTTCTGAGAAGTGTGCAAGTACCAATGGTA-TCTGGGAAATTCATATGATTTCCTTTTTAAATAGAAACAAGTAAAACACA---AACGGTCCCAGGTTAAGTTAAGGCCCCCTGTTTTCCAAA--GAAAATTCCATTTCCAAGCAGCACTGATAATTGGATGCATCTTAA ...x..xx....:x..x..--....:.x..x..:...x...x:.:..x.:x...:...:.....x..................................:............................................:.x..:...---:...x.x..xx..x...:.x..x:......-----------.....:...x:-....x::x.x....x.xx:x.x.----...x.....::x.xx..:x.xx.:x.:.x..:.x.x.....xxxx...::::..:.x:..:.x:x...-----.x.....:..------------..:...x.....x.....:.x...x.-----------.....x...........x.x........xx..x..x:...x.:-:..::..x:.:..:x....:..:.::x.-------------------..:::...-------..........x.........x..:....:x...:..x..-..x.:.x.x:..:.......x..x:x:..-......:.......:.........x..........x....x...................--.............:....--....:..................xx..xxx..x.x......x:..----------......x.....:.:...-........:......x....:....:.......:....:...::::x.::...::..x.--.....:........x:x..:x:.:..:...:x::.-.:..:..:..x:xx:.:x....:..x....:.x.---:x.:....x....---......-::.....:.:--..:.:.::..xx.x:.....--..x::...:x.:xx:........:x.::....xx..:...:.x.. 19M2D132M3D30M11I11M1D23M4D68M5I10M12D26M11D43M1D28M19I8M7D39M1I29M1D60M2I18M2I45M10I18M1D59M2I35M1D34M3I13M3D6M1I10M2I20M2D45M 601/829 72.5% 887/94230402 0.0% 107/829 12.9% 53532898 NA +3236 chr4 + 190214555 108809990 108809989 108810052 63 TGAAATATTAATATAATTTGATTATTAGGAAGTAAGAAAAAACAAGATTTCAAATATTAGCAT chr4 - 94230402 78966713 78966712 78966775 15263628 15263627 15263690 63 TGAAATATTAAAATACTATGATTACTCGAAAGCGAGAGAAAGCTATGTTTCATATGTTAACAT ...........x...x.x......:.x.:...::...:...:.x.x:.....x..:...:... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 29843277 NA +26380 chr4 + 190214555 108813116 108813115 108814029 914 ATGTCTTCACTGCCAAGGGCAGCCCAAGGAAAACTGGTGGC-AGCAACAGGCTCAACCCCTTCGTATTTCAACCAAAGTGGCCACATGAGCCCACAATACTGGAAGCTGTAGATCTGCAGTCAGGACTGCAACTCCCTCAAAATACAAGACAAATTGTGTGTGTGCTCTCCGCCACCTTATCTCTTTTTGGCAATAAGCCATGGTGTAACCCCCTTGAGATGACAAAAGGAATAAAGGTTCAGA---TGTAATCAAAGGACTCC-TGATCAACATGCTAGCATCTGAAGT---TGCACAGCAAGCAGGTTTGGCACACAG--TCATGCTTTTTTAGTTAGTTTCAATGGGTGGTGTAGGTATGAGTCAACGCCGACATGAAAGGTGAATGGGAATGT---GATAATCAGCTCTAAAATCAGTCAGTATAGTACATTTTCATAGCTTTGAGTCCATATTTGGTCACCATTTCATGTAAACTATTTCATGGCACTTTTTGTCCATGCAA-TTAGCAAGCCAAAAGAAGGAAAATAGCTAGTACAATCAATCATTCTCTACCACTGATTTGTCCATATAAATACGTATCTTCACATAAGATAAGGAGATACTGATCTATATTTTTTGCAGGATTCTCACTGGTTTCACAAATTGCCCAATTTCAGATGTAAGTGGAGTAAAAATGGACATGTATACTACTGCCAGCAGGAAGAAGCAGCCCTATGTAAACATATCTCAGACTTGTAAAATCTGCAATTCAGTTTTCAACTATAAATATTAAAAATGGACCCTTATATACACAACTTCATGCTTGAAAGGTTAGATTCATCACTGCAGAAAAAGACAACAAAAAGACAAATACATGGAATTAGTAGTCTTGAATTAAAATTTTAAATCAATATTT-ATTTTCAGAAAACTGGTAGAACCTTGA chr4 - 94230402 55283793 55283792 55284635 38945768 38945767 38946610 843 ATGTCTTCATGACTGTGAGCAGTGCAAGGCAAACCGATGCTGATTGACAGGCG----------------------------------GGACCCACAAGGCTGGAGGCCAACCACCTGCAGCCGGAACTGTG-TTCCCCAAAAATTCAAGGCCTCTT-----TCTATCCTCCTCTGCTTTATCTCTTTTTAGCAATAAGCCATGGTGTGACTCCCTTGAGACGACAAAAGGAAACAA--TTCAGAAGCTGGAATCAAAGGTCACCGTGAGCAGCCATTTAGCATGTGACGTGATCACACAACAAGCAGGTTTGGCACACAAACTCATGCTTTT--AGTCTGTAGAAGCAGATGTAGT-GGCATGAATCAGTGAAG-CATTTAAGATGGACATGGAAGCCAAGTCAGTAAACTCCAATGGCAGCTGGTACAGTACACTT-CATAGCATTTAGCTCTTATTTGGTCACAATTTCTTGTAAACTAGTTCATGGCACTCATTGTCCATGCAGGTCCACAAGCCAAAATATAAGAATTTACAGAAGTAATCAGA---TTTATGTTATTGATTGCTGCATAGA------TATCTC---------TAGAGAGAGAAT-----------CTTGCAGGTTTGTC-CTGCAGTTATATATCATCTAACTGCAGATGTAAGTGAAAAAAAGATGTACACATGGACTATTGCAAACAAGTAGAAGCAGCTACATGTAAACATCTCTCAGACTTGTAAAATCAAATTTTCCATTTGCAACTATAAATACAAAAAGTGGAGCACTATATACACAACTTCATGCTCGTAAGGTTAGATTCATCACTGCAGAGACA---AAAAGAGACACAGATTGATCAGGTTAGTA------AACCAGTATTTCTGATTTCTATTTCAAATACATAGACATGGCAGAATTTTAA .........:x:.::x.:....:x.....x....:.:..x:-.x::......x----------------------------------.::.......x:.....:..::xxx.:......:.:.:....::-:....:x.....x....:.xxx..-----.x.:::....x.::.:............:.................:..:.........:...........xx..--......---..x.........x.x..-...x..:.xxx:......x...x..---::....:...................:--..........--...:x..xxx.:::.:..xx..-..:....:...::.xx.-...xx...:..:.::x.:.x.:---.x:.:.x.:...:..x:x...:::...:......:..-......x..x..::.x...........x.....x.........x...........:x...........:-.:x:..........x.x:::..x.x:.x::x::.....:x---.:.x.:::.:.....xx.x....x.------.....:---------..::....x.x.-----------:.......x..x..-...xxx.:.:.x..:::.:..:.x............:.:x...:...x...::.:x....:...x.:..:.x.........:x:..........x..................x:xxx...x:...x............:x....:....x.x:....................:.x.......................:.x.---..x.:.:.x...:..xx..x:::......------..::.:x....:x:..:xx.....-.xx.x..x.:.xx...:....::..:. 41M1I11M34D44M1D24M5D75M2D6M3I17M1I25M3I27M2I10M2D22M1D17M1D22M3I37M1D69M1I40M3D25M6D6M9D12M11D14M1D204M3D29M6D24M1I27M 588/828 71.0% 843/94230402 0.0% 101/828 12.2% 53529323 NA +4369 chr4 + 190214555 108817392 108817391 108817458 67 CCTACCTTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCTGTTTTAAAGAGAAGAAAAAGA chr4 - 94230402 55287112 55287111 55287178 38943225 38943224 38943291 67 CCTACCTTTTGCCAACAGCCAGGCATTGGTAATCCATCAGGACCCTGTTTCCATGGGAGGGGAAAAA ..........................x.....x.....x..x........:x.x.:..:.::...:. 67M 55/67 82.1% 67/94230402 0.0% 0/67 0.0% 53530280 NA +4369 chr4 + 190214555 108817392 108817391 108817458 67 CCTACCTTTTGCCAACAGCCAGGCATGGGTAAGCCATCTGGCCCCTGTTTTAAAGAGAAGAAAAAGA chr4 - 94230402 55285278 55285277 55285344 38945059 38945058 38945125 67 CCTACCTTTTGCCAACAGCCAGGCATTGGTAATCCATCAGGACCCTGTTTCCATGGGAGGGGAAAAA ..........................x.....x.....x..x........:x.x.:..:.::...:. 67M 55/67 82.1% 67/94230402 0.0% 0/67 0.0% 53532114 NA +34554 chr4 + 190214555 108818117 108818116 108820032 1916 CTTCAGATACAAATGACACAAATAACGCAGGAAGAGTTGGTACATCAAGAAGGCATGCTTCTACTTTTCCACCAACAAAATGATCATAAAATATGATTTATCATCAATACCAAGCAAACAAA--GAACTGGGAACTTCATATTGAGATTTTCTAACTATAAT-------CACTGACTGCTTAATTTTTAAAAATATAAATACAATCTCTTAAAGAGAA--------ATATAA-ATTTATCTTTAAAGAATCATGCTTATACCTGAAGAATAATATAAGAACATGCAGACCAA-TATAACCATCAACGCAAACATAAAAATTTTTATTTATACCTCAGAAAATATGAATATA------------CTTTCATTTTAAATGTAAAAAAAGAACACTTTTAAAAAGCTTCATAAATATTTGGGAAAAACTGGTAATGCCAGATTGGTACAAGGAGAAGGTTCAACCAGCAGAATTTTAGATTTTAGTATCAGGAGGATTTTGAGTTCATGCCAATGGAGATAAGGGAGT-TTG-GTCTACTTTAGGAAAGTGAGTTTCAAAAGGAGAGACCATTAAACTGAAAAGGTTATGTGGCAAAGAA---GAAGGTTGGGGCTGCAGACTTTTATCATCTTTAGAAGCTCAGAGAAGTTTGGTCTTCTTCTTTGTGG-TCTCTTAAAGCATTCTCTTGAATTGGTTAACA--CTTGACGACAGAA-----------GCTGAATTCCGTAGGTTGGGCCTTATTTATAGCCTGATTGAAA--TATAGCGAAAAAGGCAGAAATACCTTTTTTT----TTTTTTAGAGAAAAA------------------------------------------------GAAAAAAAGTCAAA--------------CTTAGGTGG-----------AAAAC--------------CAAAAGTTAT------GGTCTAGCAGTG-TCTTTGCATCAAATATTTTCACATAATT----TTAATGT-----AATCTTTAAATATTTATTGAAAAAATTAATA------TCCCAAAGAACAC--AGAAAAGGTG--------------GTCATGTCAGTTGTGAGAACAACATCAGGAGA-TTAATTTGCATTCATTGATAGAAACGCGTGCTTGCTCTCTGACTCTGCACAGTGGCAGAAGGAGCC----TGTTCATGCACATGCATGTAGTGTGTTTATCATGTAAAGCTTGCCCAGAAA-GCACCACTTTACACTGATAGAGATGAACATGTGATAAACAAAGGAACTGCATGCAGGGT-GGTAGGAAAGAGAAATACTGTACCAATTGGCAAGGGGCATCCAGCCCATCCAGGCCAGGCTGGCCTGGCTCCCCTTTTTCCCCCTTAACGCCACGGAATCCCTGTTTGTAAAGATTAACTCATAATGTTACTAACACAAGAAATCACTTAAGCACAAATTCTGC--GAAAGAAGTAACTACAACAACAAAGGCTGGGAGAGGAGCAACTCTGAAG----GGAAAAGTAACATCCAGTGAAGTTGGG----------CAAAGTAAAATGGAGGGAGACATATTCCTACAACAGGGGCTTGTCTGAAAACAGTGGCCTCCTCTTTTGAAGGGTATGGAATCGTGCCAGTTCCTTTCGGATCTTACATTCAGGTTCCAATTGTGCCGTGATATTTGGGGGTTAAGAAACCAGGCAGAGCTAGTGGCCCAAGACGAGATGTGGAACGTATCAGGATAACTGATAAATGTTTCTGGGTATCTTGAAGTCCATGTTA----AATGAGCCCAATCAGAAACCCTCCTGTTACGGATCCCTCCGGCTTGCTCTTCTCCCA-----TCTGATCCCCTCACACAAACATCTGGAGA--CAGT-------TCCACAAGTCAGACATACCAACGGGCAGGGTGCATCTAATCCAGGAGCACCCTGTTCTCCTTTCTCCCCTTTAGGCCCCTTTTTGCCTTTCTTTCCCTTTTCCCCCTGTGGATACAAGGGTTTAAATAAAAGACA---AATTTTATTTGGGGGAAAATAACGGTA-----ATTCAAAAGATGG-----------TTTAGGTAAGAAAATTCTGGAAGGGCATTTACCACTGTTTTCTGATTTAGGTAAGGCATGATAT chr4 - 94230402 55288167 55288166 55290170 38940233 38940232 38942236 2004 CTCCAGATATAAATGATAATAAAGAGACAGAAACAATTT-TAAATTACAAAGGCATGCTT--GATTATCC-CCAACAAAATA--TATGAGATATGGTT-ACCATTAAGTGGAAGCAAACAAAATGGAGCATGGACTAATCTTAGAGGCTATGTATTTAAGATTAAAATTCATTGAC--CTTAAATTAGAAGAG-----GTATAGT---TGAAAGAAAATTTACTTGATTTAACATTCATCTT-AGAGAACCGTGCTTA--ACCAACAAACAGTATCAGAACATGCAAATCAAATTTCACCATGAACAATTAAAAAAAAATCTTCCCTGCTTCTTTAGAAAATGTGTATGTAGGACTGCTTGTCTGTTTGTTTAGTTTTTAAATGGAAAATAATTTAAACTTACTTTGCCATTA---------AATCAGTGTTGCCAGATTGGTACAAGGGAGAGGGTCAACGAGTAGAATTTTAG-------TATAGGTGGGAACTTGAATTCATGCTAACATAGAGTGGGAAGTGTTGTGTGTATTGCAGGAAGGTAAGTTTCAAGGGTA-AGACCATTAAATTGGAGACATTAAATAACAAAGACAGTGAGGGTTTGGGCAGCAGACCGTTATCTTCTTACAAACTTCAGGTAAA------CTTTTCCTTTCCAAATCTAGTTAAATACTAT------TTGATGAACAGACCAGACACCAAAGTTACTGCTTGTGTAAGGTCTGAGAGGTCAGGCTCCAGCTTT-GCTTACTGGAAACCTATGACCTGGTTTCCAGAAATAATATTTTTTCTGATTCTTTATATAAAACTCATTTTGGCCAAATCCTGAAAACATGCACCCTCAACAACACGGATTTGAAAGGAAGTCCAGGGTGCGGAGTAGCTCTTGGGTGGGCTAGGGTTTTAAAACTGAGCCAGTGCAGACAGAAGTCATCAGACTTGATTAGAAGTGGTGATTGTGCTGGGGTTCTACAAAGACTTGGGTTCAGGGTCAGTAAGGCAGTAGGCATTTTGGGAGGAAAATAACAAACAATTCTCAGGGAAAATGTAGGAAGGATGCAAACTTATAAATTGCCATGT--GATGTGGGAGCAAACTGCTGAGAGTTAGGTCTGAGGCATCAGGAGGATAGTGTGCTCTTTCTTTA--TGGTTACGATCACCAAAGCAGCTGGTTTATTCATGCACATGCATGCGTTATGTGAGTAATGTAAAGTCAGCTCAGAAATACATTACTTTACATTGAGAACGGCTGAC----TACAAACAAAGGAGCCACATGCAGGGTTGGTAGGAAAGAGAAATACTGTACCAATTGGCAAGGGGCATCCAGCCCATCCAGGCCAGGCTGGCCTGGCTCCCCTTTTTCCCCCTTAATTCCACGGAATCCCTGTTTGTAAAGATTAACTTGCAACGTTACTGTCA-AGGAAATGCCTTCGGTATTGACTTAGTTGGAGCAAACAAATAACAACAG-AAAGGC---AAGAGGAGCAAGCTCACAGCAGTGGTGCAGTTTTAACCTATGGGGTCAGGGACTCTGGCCCACACTGAATTT--------CATTCTTTTCCAACA----TTCAGCAGAAAATAATG--------------AAAAAAAACAACCAAACC--TTGCTTGAAGGCCTTA-ACTCTGATGCT--TTAAACC---AAATTCGGAGGTTGAAAAACCA-----ACTCTGTTCCCTAA---------------------------------------TTTGTGAATTTTGAGAT-AATGCTGCATTAACAAGTGCAACAGGTGACACACTAGGT---GGT-------GCTTGTTCCTCTCCCCTCATTTCTTATTCCATCA-ATCTACAGCAGGATGATCAGTCATCCAATACACAAGCGAGACGTACCAATGGGCAAGGTGCATCTAATCCAGGAGCACCCTGTTCTCCTTTCTCCCCTTTAGGCCCCTTTTTGCCTTTCTTTCCCTTTTCCCCCTGTGGATACAATGGTTTGGACAAAACATGTTTCATTCTTTTGGAAAAAAAATAAAGATAGATTGGTTGAAAAGTTTGAGTTTTTCTTTTTAAGCCAATGGAGAGCTGAAAGGACACTTACCACTGTGTTCTGGTTTGGTTGGTGCATTATGT ..:......:......:.xx..x:.x:...:..x.:..x-..x..:.x:...........--:x..x...-..........:--:..:.:.....:..-.:...:..xxxx...........--.:.x::x.:...xxx:x.x...::.x.x..x:..x:..-------..:....--.....x..xx..:.:-----:..:.:.---.x.....:..--------..x...-...:.....-.:....:.:......--x.::.x:..:.:...x..........:.:...-.x.x.....x...:xxx.x.x......:..:x:.xx.x.:.:.......:..x..:..------------:x..::...x:xx.x....x::.:..:.x...x..xxx:...:::x.x..---------..:::..:x..................:::...x.....x..:..........-------...x:.x:...x:....:.......:..::x...xx:..:...-...-..x..:.x:.....:..:........::.x.-...........:..:.:.x:...x:.::......x---..:....x....x......:x.....x....xx:..x:....:x..:------...:.:....x:::-...xx.x..::.:.x.------...:.x....--.:x...:x..:.:-----------.:x:::.::x:x....::...:::.x:.x.-..:.:x.x....--...::.xx::xxxx........x:x......----..:....x.x....x------------------------------------------------....::.....x.:--------------...:.....-----------.....--------------..:....:..------x.x:...x....-.xx...:::::::xx.:.x..x.x.x..----.:.:x..-----.:x.xx..:::....xxx..::...x...:.------..:..::...x.:--..:..:.:..--------------.:.....--.x....:..:...xx.xxx....-...:x.:xx.xx...:::x..:.xx.:.....:x:...:.:--.xxx:..::.x:.x:...x...:----.:................::x.:...xx:.x........::x..:......-:..::........:...x.:x.::x:..----x.:..........:.::..........-........................................................................................:x..............................:::..:......:x..-.:.....xx...x:.:.:x:.:.:x.:--..:x:..xx..:x......:-......---:..........x::::x..----..x:x...xx:.x..x:..::..::..----------..x.x.:..x.x--------...x:.::.x.....----:.::x.x.....:.:..--------------.:::x.x:x..:.:x:..--..x...xx:.::....-.:..x.:.x.:--..:x:..---.x...:..:....:.:......-----.x::x..xx..:..---------------------------------------.:..x.x..:....::.-x...:.:----..::..:x...:x:.x:..x.x.:x.x.---.:.-------.....:..:......x-----...x..:..x...-.:xx...x.x...x:--....-------.x......:x....:......:.....:.........................................................................................x.....::.:....x.::---x...:.x..x.::::.......x.:..-----:..x.....x.x.-----------..x..x:..x::.:xx...:....:..:..........x.....:...:.x.::x....x..:. 39M1D20M2D8M1D11M2D14M1D23M2I38M7I7M2D15M5D7M3D10M8I6M1I9M1D15M2D32M1I58M12I50M9D53M7D43M1I3M1I31M1D35M3I47M6D14M1I16M6D10M2I13M11I30M1D12M2I31M4I15M48I14M14I9M11I5M14I10M6I12M1I28M4I7M5I31M6I13M2I10M14I7M2D23M1I41M2D23M4I51M1I28M4D27M1I136M1D27M2I20M1D6M3D19M4I27M10I12M8D15M4D17M14D18M2D16M1D11M2D7M3D22M5D14M39D17M1D7M4I28M3D3M7D16M5I13M1D15M2I4M7I135M3I27M5I13M11I64M 1211/1763 68.7% 2004/94230402 0.0% 394/1763 22.3% 53529950 NA +7272 chr4 + 190214555 108820412 108820411 108821243 832 ATATTACTTGTGTAACTCTCATTCAAAAATA--TTCAATATCTTAAAATATG-CTTCTATATCTTTTAATATTTTTTACATCCTTTTGTTAC-AGCAAAACTTTTTTTAAAAGAAACTAAAAGCAAATACTTTCCTTATTAAGTCAGGTAAACAAATGTTAAAAGTGCTAATACTTTGCAGCAATGCCAACTGGAGAAACAGACTTATTTATAAACC---TAGGGATCTTCTTTAATTCACTCTCTTACTGATCTCATGCCATGTATTTACAATGGTAAATGAGTTTCCAGCTTACTCACAATGTAACAAAAGCCAAAAAAA--------AAAAAAATCTGTTCAGGAGAGGAAAAGCAGCTTGGACT----CAGT-AAAAATGAGGTAGGCAGGATAATTACATAGTGGGAATGTAGC-----------------------TATGGAAATTAGTAT------------TTAGGAATCAAGGTAAAGGTTGTGGGA-------AATCTGC------ATGGATCATAAGGCCAGAGGAATTAAGGAAAGGAGGCAAA-AGGAGGAGTAGGAAGGAATGCACCT---------CAGCTGTTTTATATTAACATCAGTATCTCTGCATATT-TATAGACAGGGAGTTAGTGCCGTG-CAGAACTCAAAATACTATACAATACATACTTAAATAAA-------TGTATTCATTCTGCAATCAGGATGGGAGTTACAATAAAACTGAATAATGTCTGAAGCAAAGCAACATGAATATTGAA------AGGTTAAAAGAGATATACATAACAGAAATATATGAGATGTGCATTCAAATCAATACATT-CATTC-TGACAGCATGAGCAAAAGCTCTTCATTTATC--TCCTGTGTGCCAAAAAGATTGCATCAGAAGGCTCAGAATCAAAAACAC chr4 - 94230402 55290841 55290840 55291726 38938677 38938676 38939562 886 ATAATCTTTATTTAACTTCTATTTAAATGTTCTTTCAACAGCAGAGAGCATTTCATCTACTCATTTTACTGTAT---AAGTCCTTTGATTTTGAACTAAATTTTCTTT--------TTAAATGTAAA-ACTTCC-------AGTGCTTTAATTACTCATGGAATGAGTTGATCCCTT-CAATAAAGCTACCTGCATAAATGACCTCACCTTCAAGCAGTATAAGATGTTTGGAGAGTTCATTTTCTAATTGATTTCACACCAGTTGATCACAATGGTAAATGAGTTTCAGGCTTGCTCTCAAATTCATCAAAATCAAAAAAGGTTCAGTTaaaaaaagaaaaaaaaaaagaaagaaacaaaTTGGGCTGCGACTGTAAAAAATGGGATAGGAAGGATGAGTGAAT--CAGGAATATCACAAAGGAACAGGAAAAAATAGTCATAGGAAAATTAGTATGACGTTGGAGAACCAGCAAGCGAGGTTGTGGCTATTGGGAGGATTTAATTTGCGAGGAAAAGGGTAAAAAAGACAGGGGAATTAAGG--AGGATGAAGATAGAAGGAGAAGGAAGGAATGCCCCTTTGGAAAGACAGATGGGTTTTGGTGAA------------GCATAGTAAACAGACATCTAACTAGTACCACACCAGCATGGAAAGTCTTAATTCATTCACAGACAGAAAAAGCattttttttttttttacacaaataaaaaaataatt-CACTGTAACTTGTTTAAATAGAAAGGAAAGCACATTATTCATTCAGCATCGTAGCATACTTGACACATTCA-AATGAAAAAATATCTTTTCTGCGAACAA---AACACATTGCATTTGTGACGTGATAGGC-AAAGTTCCTTGTTTATCTTTTCTGTGTGCCAAAAAG-TTTCAGGATGATACTTAGAAAAAAAAAAAC ...x.x:..:.x.....:::...:...x:.x--.....:.x.xx.:.::..x-.x....:x:x.....x.:.x.---.x:......x:..x:-.:.x...:...:...--------:....x.:...-....:.-------...xxxx...x:.xx::.x:..x.x.:.:..x.:..-..::..x..:.x...x.x...:::x..:.::.x:..:.x---..:.:xx:..xxxx.:....:.:...x.:....:...::...xx.:x.:...................x:....:...x...xx.x.:x...::.......:--------.......xxx:xxx.::.::::.:..:..:x....:..----.x..-.......:.:....x.....:.x.:x..--::.....:.x:.-----------------------..x.:..........------------::..x..x.:....x:x..:.:.x..:-------...:...------.x..:.x.x..:.x...:..........--....x.x.:.-..:.....x............x...---------...x..xx..x.:x.:.x------------.....x.-x.:.....xxx.::....:..:::-...x.:xx...:.x:..xx:x..x..:.xx:.:.x...-------.x.x..:x..x::...x:.::.x::x.:..-..x.:x....x:x.x.x:.xx:...x......xxx.:xx:...x.:------..xx..xxx..x.:..x..-..:::...x....xxxx.x...:xx...---..:.....-....:-....:xx..::..-....:..:.::......--.:...............-..x..xx.x:.x:..:....xx.....x.. 31M2I19M1I21M3D15M1I15M8D11M1D6M7D36M1D39M3I102M8I38M4I4M1I28M2D12M23I15M12I27M7I7M6I28M2D10M1I25M9I18M12D7M1I24M1I38M7I30M1D46M6I19M1D28M3D8M1I5M1I13M1D17M2I17M1D30M 499/789 63.2% 886/94230402 0.0% 140/789 17.7% 53529571 NA +5936 chr4 + 190214555 108824058 108824057 108824242 185 TTTTGGAGCACAGGATGGAGAAAGATTAAGTGTCAAATGGAAT----CACACAAGCTGAACAGCAAAGCAGACAGCAGGAGAAGAATCAAACAAGGTACATGCTGGGATGGAGAGGTCACCTTTTCTCCCTTTTCTCCTAGATCACCCTTCTCACCCCGTGGACCAGGGAAGCCCTGTAAGATAAAAAG chr4 - 94230402 55294303 55294302 55294484 38935919 38935918 38936100 182 TTTTGGCACACAGGGAAAACAAAGATCAGGTTT--AATGGGATGATTTATGGAATAAAGACAGCAGAGCTGACTG-GGCCAAGGAACCAAGCAA----CAGTTAATAACACTGCGGTCACCTTTTCTCCCTTTTCTCCTATTTCACCCTTTTCTCCTCGAGGACCAGGGAAACCCTATAAAAAGAAGGG ......x:......:x::.x......:.:..x.--.....:..----:.::x..xxx::......:...x...x.-:.xx:.:...:...:...----..xx:x:x:.::xx.x..........................xx........:..x..:..x...........:....:...:.x:..::. 33M2D8M4I28M1D18M4D91M 123/178 69.1% 182/94230402 0.0% 11/178 6.2% 53529755 NA +5734 chr4 + 190214555 108825154 108825153 108825264 111 ATCTATTATAATAGGATGATGTTTATTGTACTTATTACTTACATCAAGACCAGGCTCTCCATCTTTCCCCTGCCAAAGAACCATAGTAGCTACATTAGTGTTTCTAAGTTT chr4 - 94230402 55295139 55295138 55295246 38935157 38935156 38935264 108 ACCTACCATTGTGAGGCATTGTTCATT---CATATTACTTACATCAAGGCCAGGCTTGCCATCTTTGCCCTGCCAAAGAACCACATAAGCTCTGTTAGTGTCCCTAAGCTT .:...::..x:.::.:::x....:...---.x................:.......:x........x................:.xx....x::.......::.....:.. 27M3D81M 82/108 75.9% 108/94230402 0.0% 3/108 2.8% 53530015 NA +4564 chr4 + 190214555 108827110 108827109 108827201 92 GAGGTGCATGTGACCAGGAACTCACAGGCAGCCCATAGGGCCCTCTTGGTCCAGGCTCTCCCATAGCTCCTTTTTCACCCTAAAATGAAAAG chr4 - 94230402 55296339 55296338 55296427 38933976 38933975 38934064 89 GGAGTACAAACTACATGCAACTTACAGGCAAGCCATAGGGTCCTCTGGGTCCAGGGTCACCTACAGTTCCCTTTTCACCCTAA---GAAAAG .::..:..x::x..xx.x....:.......:x........:.....x........x..x..:.:..:...:............---...... 83M3D6M 68/89 76.4% 89/94230402 0.0% 3/89 3.4% 53530771 NA +4246 chr4 + 190214555 108832374 108832373 108832461 88 ACTTACTCTTTCTCCTTTGGGACCTGCAGGGCCATGGGGTCCCATAGGACCATCTGTACCCTAAAAAA-------AAGATAATATGAGATATATC chr4 - 94230402 55301199 55301198 55301293 38929110 38929109 38929204 95 ACTTACTCTGTCTCCTTTAGGGCCTGCAGGGCCGTGGGGACCAACTGGGCCATCTACACCCTGTGAAGGGAAGCCAAGAGGGTAAGAGAGAGGTC .........x........:..:...........:.....x..x.:x..:......::.....:x:..:-------....x::..x....x.x:.. 68M7I20M 66/88 75.0% 95/94230402 0.0% 7/88 8.0% 53531175 NA +11932 chr4 + 190214555 108834292 108834291 108834554 263 TGTGCTGAAGCACATGATTCACAGCC---ACAAAACA-TGTCAGAGCAAGACAAGGGACTGACTCACCCGGGATCCTGGCTTTCCGTCTAAGCCAGATGCTCCCTGTGTGATTTGGTTGGTAGCAGGGTTGGT-GGGTGTAACACGAATGACAAGAACA-GAGATTAGTATGAGGTACCGATGAACAAATGTAACACTTCAAACAACATAATACGCA--GTTACAGGGTTCTGGGATGAATATCACATTGCTACAAATTGTTAGTTAAAAA chr4 - 94230402 55302036 55302035 55302292 38928111 38928110 38928367 257 TGTGCTGGGACGCA-----CACAGCCTGGGTAACACAGTGACATGGAAAGACAAGGGACT----CACCCGGGGTCCTGGCTTTCCGTCTAAGCCAGATGCTCCCTGTGTGGTTAGG-TGGAAGCATGGATGATGGGGTACGACACGGGTGACAAGAACGTGAGATTAGTAAGTGGTGCTGATGAAGAAACATAA---TTCAAAT-GTACAGTACGAATTGCGACAGGGTTCTGGGACGGGTATCACATTACTACAGCATGTTAGTTAAAAA .......:::.:..-----.......---::..x...-..x..x:.x.............----........:.....................................:..x..-...x....x..x..:.-....:::.....::..........:-..........x.x...:.:......x...::...---......:-::.:.:....x.--.:x..............:.::.........:.....:xx............. 14M5D7M3I8M1I22M4D52M1D16M1I25M1I34M3D7M1D12M2I52M 203/249 81.5% 257/94230402 0.0% 22/249 8.8% 53532256 NA +16790 chr4 + 190214555 108837945 108837944 108838287 343 AAACAAAACTGGGCTGA-GCTCTGCTCTAATATAATATGTTTTCTAATTACAGAAACCTCAACAGTACGAGCTGCTGAGTAAACCAGAGTTAT-CATGTAGGGTAGAAAGAAAAATCTGAGATTTGCACTAAAATGGAA-------AGTTTTCTTTACTTACTGGAAGACCAAGGGGTCCTCTGTCACCCTTTTGACCTGGTTCACCCTTCAATCCTTTAACACCATTTAACCCTGGTTCACCCTAAATGCAAAAG--CAAATGCC-AATTTTGGTTGCTATTATGGGTGTTTAAACTGTGAGAGAAGAGAGCCAGTCTCTGAAATAGTTGCAGATTCCAGTTTTAGGAAACAGC chr4 - 94230402 55303193 55303192 55303525 38926878 38926877 38927210 333 AAACAAAAACAGGCTGGTGCTTGGCTCTACCATGGCTTATTCT---------------------ATATATGCTGCTGAGCAAACCAGTGTTGTTCATTGTAAGCAGAAAGAGAAGTTTGCAATTTGCACTGAAATTGAATAGATTTGGGATTTTTTACTTACTGGAAGACCAAGGGGCCCTCTGTCACCCTTTTGACCTTGTTCACCCTTCAATCCTTTAAGACCATTTAACCCTGGTTCACCCTAAATGTAAAAGTATAAATGCCAAATTTTTGGTGCTATAATGGGTGCTTAAGCTGGGATAGAAGA-AGCCAGCTTCAGAAATGGCTGCAAATTCCAGTTTAAAGCAAGGGC ........x::.....:-...:x......x:..:::x.:..:.---------------------:..::x.........:.......x...:.-...xxx::.:.......:..:.:..x:.........:....x...-------:.xx..:........................:.....................x.....................x............................:.....--:.......-......x.x......x.......:....:...x..x......-......::..x.....:.:....:..........x.:.x..x:.. 17M1I25M21D29M1I45M7I110M2I8M1I42M1D45M 260/321 81.0% 333/94230402 0.0% 34/321 10.6% 53534752 NA +3767 chr4 + 190214555 108841565 108841564 108841734 170 TGCTTAAAGGCTCAA--AGATTATCAACATTACTTGACAAATAAATAAGATAGGACAGACATGCTTCTGTCATGCTTCTCCATGATTATCAAGGAA---------GCAGAAATCAAA--------TAATCAAGGGATTTGTTGGATTACCTTTGGTCCAGGAAGTCCATGAGGTCCCTGAAAATGGAAA chr4 - 94230402 55305194 55305193 55305370 38925033 38925032 38925209 177 TGCTTTAAGGTTTAAGAATATCAGAAACATTCATTGAATGAGACATCAGACAAAACA-------TTCCTGCATGCAT-----TAAAGAACAAAGAACGACACTTCACAGACATCAAGAACATGACTATTTGAGACAGCCATTAATTTACCTTTGGGCCAGGCAGGCCATGAGGTCCCTGAAAATAAAGA .....x....:.:..--.x..:.xx......xx....xx:.x.x..x...:.::...-------...:xx.....x.-----.:.xx.x...:...---------:....x.....:--------..x.::..:x.x:::..::x..........x.....x..x...................::.:. 15M2I40M7D13M5D14M9I12M8I64M 110/158 69.6% 177/94230402 0.0% 31/158 19.6% 53536371 NA +3466 chr4 + 190214555 108843125 108843124 108843194 70 GGTGACAGAGTGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAGAAGAAAGAAGAAAG chr4 - 94230402 37322372 37322371 37322438 56907965 56907964 56908031 67 GGTGAAAGA---AAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAG .....x...---.:.x..:x.x:......:..............:....::......x.:.:..:..... 9M3D58M 52/67 77.6% 67/94230402 0.0% 3/67 4.5% 71520753 NA +3106 chr4 + 190214555 108843144 108843143 108843192 49 GTCTCAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAGAAGAAAGAAGAA chr4 - 94230402 6440203 6440202 6440251 87790152 87790151 87790200 49 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGA ....:.....:.....::.........:....:....:..::...x.:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 102402941 87811614 +3343 chr4 + 190214555 108843151 108843150 108843203 53 AAAAAAAAAAAAAAAAAAAAGAGGAAGAAGAAGAAAGAAGAAAGAAGAAGGAA chr4 - 94230402 49250049 49250048 49250101 44980302 44980301 44980354 53 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAA .........:..............x:..........:.:...:.xx:..x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 59593102 NA +3469 chr4 + 190214555 108843153 108843152 108843231 79 AAAAAAAAAAAAAAAAAAGAGGAAGAAGAAGAAAGAAGAAAGAAGAAGGAAGAAGGAAGAAAGAA--GAAGAAAAAGAAAA chr4 - 94230402 24662130 24662129 24662210 69568193 69568192 69568273 81 AAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAA ....................xx:.::x..:....::...x...:..::..x:.....:....x..--..:x.:x...:... 65M2I14M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 84181023 NA +5201 chr4 + 190214555 108845182 108845181 108845268 87 GACTTACAGAAGGACCCTGTGGACCCGGCATTCCAGAATCTCCTTTTTCTCCTTTCATTCCATTGGCTCCCTATAAATAACCATTAA chr4 - 94230402 55307786 55307785 55307870 38922533 38922532 38922617 85 GACTTACCGAAGGGCCTTGAGCGCCAGGCAAACCAGCATCTCCTTTTTCGCCTTTCATACCATTGGCTCCCTATAA--AATCATTAA .......x.....:..:..x.x:..x....xx....x............x........x.................--..:...... 76M2D9M 72/85 84.7% 85/94230402 0.0% 2/85 2.4% 53537396 NA +5092 chr4 + 190214555 108846133 108846132 108846225 93 ACATACCGGTAATCCAGGAAGTCCAATTCCTCCTTTTTCACCTGTCATACCTGGGTCCCCCATGTCTCCCTTTGAGCCTTTGAGTCCCTAAAA chr4 - 94230402 55308570 55308569 55308662 38921741 38921740 38921833 93 ACTCACTGGCAAGCCAGGTAGTCCAATTCCTCCCTTTTCTCCATGCATTCCAGGTTCACCCATATCTCCTTTTGATCCTTTAGGACCCTAAAA ..x:..:..:..x.....x..............:.....x..xxx...x..x..x..x.....:.....:.....x.....::.x........ 93M 72/93 77.4% 93/94230402 0.0% 0/93 0.0% 53537563 NA +5131 chr4 + 190214555 108852868 108852867 108852999 132 CCACAAACCACAG-AAAGCATGCAATAGGAGTTACCGTGACAGTTAAGGTGGTAATCCTCTGTTGGGAAAATGTGTTGACAA-AGACAGAGTTATCTATTTTGTGTGCCAAAGTACAGTAATACATTTGTGAAA chr4 - 94230402 55311952 55311951 55312085 38918318 38918317 38918451 134 CTACAACACAGAGCAAATCATGCAATTGGAATTACCGTGACAGTGAGGGTGGCAATCCTCTGTTGGCAAAATGCATTAACAAGAGACAACATTACCAAAATTGAACAAGGATATAAATTATTCTGCTTGTAAAA .:....xx..x..-...x........x...:.............x.:.....:.............x......::..:....-.....:x:...:.x.xx...x:::xx:.x:..x.x..x.x:::....:... 13M1I68M1I51M 94/132 71.2% 134/94230402 0.0% 2/132 1.5% 53540916 NA +4353 chr4 + 190214555 108859173 108859172 108859268 96 CTTCTCAACAAGGCTATGAGGCAGATA-CTGCTACCATCCTCATTCTGTAGATGGGAAAACTGAGGCACAGAGAAGTGAAATAACTTGCCCTAGGTC chr4 - 94230402 10729166 10729165 10729262 83501141 83501140 83501237 97 CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:..x...:.xxx..:.....:..:..-:.:...:..x.::....:.::..:..................x.x.:..x..:...:......x::... 27M1I69M 68/96 70.8% 97/94230402 0.0% 1/96 1.0% 98130007 92084548 +4804 chr4 + 190214555 108859648 108859647 108859741 94 TCACTTGCCTGTAAGGCTTCGTGGAGGTTGCCGTTGTAGTCTATGATCTCAGTGGCTCCTTGATCCCCTTTTTGACCAGGTGGACCCTATGACA chr4 - 94230402 55315076 55315075 55315169 38915234 38915233 38915327 94 TTACGTACCTGAAGAGCTTCATGAATATTGCCATTATAATCAATTATCTCTGTAGCACCTTGATCACCCTTCTGTCCAGGTGGCCCCTGTAATA .:..x.:....x.::.....:..:.x:.....:..:..:..x..x.....x..:..x........x..:..:..x........x....:.:.:. 94M 68/94 72.3% 94/94230402 0.0% 0/94 0.0% 53544572 NA +6292 chr4 + 190214555 108862489 108862488 108863391 903 CTGGTTACTGACCTTTGACCCCTTTGGGCCTCTAGTTCCTGATTCACCTTGTTTCCCCTATT---------ACAGCAGAATAAGAGGATGAAAAAGATAAAATTATAGAAGAGATAAGAACAGAAAAATAGAAATTAGCAGTGACTCAGAATAATGAAGAAAAATGGAAACACTTTATTT-TAACTGCCTCAATATATGGCTCTACAGAATGTCGGTTATTATAATACTAAACATAA--------GTATCATCACCATAT------CATCAATTCATTCCATTATTATTTTGAAGG-----CTGCCCTCCCATCAGTGGATGAGAAGAGTTCTGTGAATAATTCTCATTAGTCTCAACAGTGTTTGGCTGCATCAATTTCC------TTTTCATCAGTGAGTAAATAGTTTCCTG---TGTCTCTAGGATGGGCTATTAAAATAAAGTGTGACCACA--TTAGTTTGCAGAAAGTTTAAATGAATA-AGGTCAAACAGACAAATAAGTCCTTAGCTCTAATATTTTCAAGGTGTTACACTCCATTAAGTTACCATAGAAACTAACACAGCACTTATCAACAGGGATTTTTTTTCAGTAAGTTTTAATACACATTGAGTGATAATGTGTTAATATGACAGCACTTCTTTTACATTTGGATATGCTATCAATTTGCTCACTGAACAGAACAGAGTTAACAGGGTGAGGTGAATTGTAAAATCTCTTTTGAAAAGAACCAGTTGGTGTGCATTTCAACAAACTATTTGTGATTTGGGCTGTTTTAATACCTGTTAAGAATGTTGTTTTAGTTTTTTGTGTTCTAAATCAAATCAAGCCAGAGAATGGTTATTTTCCAGTTTAAGAATA-ACTCACCTTTGGTCCGGGGGCTCCAGGTTCCCCTCGCTCACCTCTTCCAGGAGGCCCTGCTTCCCCCCGTTCACCCTGT chr4 - 94230402 55317768 55317767 55318534 38911869 38911868 38912635 767 CTTACTACTGACCTTTGACCCTTTGGGGCCTCTAGATCCAGGTTCACCTGTTCTCCCCTGTTTGAGGGAAGACAGCAGATGGAGAGGAGAAAAATGATAATGGAATGGGAGCG-------CAGAGAAAAAGAAATTAGTAATGACTAACTATACTACAGAACAGCAAAATCACTTAAATTATATGAGCAAGATCATGAGACTGTAAAGG-TGTGGAGTTTAATAGCACCCAGAGTAACATATTCTTTAACACCAGCATGCAAAGGCCACAGACTCCATCC-------TTCCAAAGGAAAATTAGTATTGGCATTAGTAAA-GAGTAGACATCATTAAAACCGTTTTATGGGAATGATCTATGTT--GTTTCA-CAGTTCCTGAAAAATGTTAGTCAAACAGTAGAGAAGGTATTTAACTGTCCTTAAATAAGGAGATTAAA-TGAAGTGTTACCACAACTTCTTTTCCCAGTAATTCAGAGAAATACAAACTAGCTTGCCAAGTACAAAATCTGCCTTAGCATCTTCAAGATGT--------ATTAGG--ACTGGAGAAAC------AGCATG---CAAAATGGATTTTCTCT--------------------------------------------------------------------GCAATCAATAGCTACAATGATCAGAA---AGTT-------TGGG----------------CTTTGAAAGTGACCAAGTTCTCATTCATT------AATTTTTT----TTTCGGCTGAAA-AAGATGTGTCACGGGTGTTCCC---------------CTAACACAAACA-------------------CTCCAATGTGAAATCAGACCGACCTTTGGTCCTGGAAGTCCAGTTTCACCTCGCTCACCCTTCCCAGGAGGGCCTGCCTCTCCTCTGTCACCCTGT ..x::................:..x..........x...x.:.......xx.:......:..---------........xx:......x:....x.....x:xx..:.:..x.-------....:...x.........:.:.....x.xx...x.:x....x.::::..x.....x.x..-..xxx..xxx.x:..:x.:..x..x..:-...x.:x.x.x...::..:x.:x:...--------x..x..:..x...::------..:x:.:..xx...-------..:::....-----:x.:x:.xx...:...::.-...x...xx..xx.:..xxxx.:.:..x:.xx.x.x.x:....--.:.x..-..:..:.:------.x..x:...:xx....:.x.:xx.x:.x---....::..::xx:..xx......-.:......x......--..xx...x.x::x.:..:.:.x:....-.::::.:x:x.x...:..x:xxx.:x..::..::..:......:...--------....:.--..::x......------....:x---...x.x.......:.:.--------------------------------------------------------------------..x......xxx:x..x...x.....---....-------..:.----------------....x:..:x..x.x....xx::.x....------..:.x...----...x.....xxx-..x.:x...:.x.::....x::---------------....xx....:x-------------------:....:.x.:.:.x:.-..:x...........x..::x.....x...x...........::.:........x.....:..:..:.xx......... 62M9I42M7D60M1I28M1D27M8I15M6I14M7D9M5I19M1D43M2D6M1D8M6I28M3I23M1D15M2I27M1I47M8D6M2D11M6D6M3D17M68D26M3D4M7D4M16D29M6D8M4D12M1D22M15D12M19D16M1I79M 472/725 65.1% 767/94230402 0.0% 220/725 30.3% 53544721 NA +4740 chr4 + 190214555 108862515 108862514 108863391 877 GGCCTCTAGTTCCTGATTCACCTTGTTTCCCCTATT---------ACAGCAGAATAAGAGGATGAAAAAGATAAAATTATAGAAGAGATAAGAACAGAAAAATAGAAATTAGCAGTGACTCAGAATAATGAAGAAAAATGGAAACACTTTATTTTAACTGCCTCAATATATGGCTCTACAGAA-TGTCGGTTATTATAATACTAAACATAA--------GTATCATCACCATAT------CATCAATTCATTCCATTATTATTTTGAAGG-----CTGCCCTCCCATCAGTGGATGAGAAGAGTTCTGTGAATAATTCTCATTAGTCTCAACAGTGTTTGGCTGCATCAATTTCC------TTTTCATCAGTGAGTAAATAGTTTCCTG---TGTCTCTAGGATGGGCTATTAAAATAAAGTGTGACCACA--TTAGTTTGCAGAAAGTTTAAATGAATA-AGGTCAAACAGACAAATAAGTCCTTAGCTCTAATATTTTCAAGGTGTTACACTCCATTAAGTTACCATAGAAACTAACACAGCACTTATCAACAGGGATTTTTTTTCAGTAAGTTTTAATACACATTGAGTGATAATGTGTTAATATGACAGCACTTCTTTTACATTTGGATATGCTATCAATTTGCTCACTGAACAGAACAGAGTTAACAGGGTGAGGTGAATTGTAAAATCTCTTTTGAAAAGAACCAGTTGGTGTGCATTTCAACAAACTATTTGTGATTTGGGCTGTTTTAATACCTGTTAAGAATGTTGTTTTAGTTTTTTGTGTTCTAAATCAAATCAAGCCAGAGAATGGTTATTTTCCAGTTTAAGAATA-ACTCACCTTTGGTCCGGGGGCTCCAGGTTCCCCTCGCTCACCTCTTCCAGGAGGCCCTGCTTCCCCCCGTTCACCCTGT chr4 - 94230402 55319543 55319542 55320283 38910120 38910119 38910860 741 GGCCTCTAGATCCAGGTTCACCTGTTCTCCCCTGTTTGAGGGAAGACAGCAGATGGAGAGGAGAAAAATGATAATGGAATGGGAGCG-------CAGAGAAAAAGAAATTAGTAATGACTAACTATACTACAGAACAGCAAAATCACTTAAATTATATGAGCAAGAT-CATGAGTCTGTAAAGGTGTGGAGTTTAATAGCACCCAGAGTAACATATTCTTTAACACCAGCATGCAAAGGCCACAGACTCCATCC-------TTCCAAAGGAAAATTAGTATTGGCATTAGTAAA-GAGTAGACATCATTAAAACCGTTTTATGGGAATGATCTATGTT--GTTTCA-CAGTTCCTGAAAAATGTTAGTCAAACAGTAGAGAAGGTATTTAACTGTCCTTAAATAAGGAGATTAAA-TGAAGTGTTACCACAACTTCTTTTCCCAGTAATTCAGAGAAATACAAACTAGCTTGCCAAGTACAAAATCTGCCTTAGCATCTTCAAGATGT--------ATTAGG--ACTGGAGAAAC------AGCACG---CAAAATGGATTTTCTCT--------------------------------------------------------------------GCAATCAATAGCTACAATGATCAGAA---AGTT--CGGG----------------------CTTTGAAAGTGACCAA---GTTTTCATTC------ATTAATTTTTTTTTCGGCTGAAA-AAGATGTGTCACGGGTGTTCCC---------------CTAACACAAACA-------------------CTCCAATGTGAAATCAGACCGACCTTTGGTCCTGGAAGTCCAGTTTCACCTCGCTCACCCTTCCCAGGAGGGCCTGCCTCTCCTCTGTCGCCCTGT .........x...x.:.......xx.:......:..---------........xx:......x:....x.....x:xx..:.:..x.-------....:...x.........:.:.....x.xx...x.:x....x.::::..x.....x.x..xx.:x:x.xx:..-:...:x...::.:.:-...x.:x.x.x...::..:x.:x:...--------x..x..:..x...::------..:x:.:..xx...-------..:::....-----:x.:x:.xx...:...::.-...x...xx..xx.:..xxxx.:.:..x:.xx.x.x.x:....--.:.x..-..:..:.:------.x..x:...:xx....:.x.:xx.x:.x---....::..::xx:..xx......-.:......x......--..xx...x.x::x.:..:.:.x:....-.::::.:x:x.x...:..x:xxx.:x..::..::..:......:...--------....:.--..::x......------.....x---...x.x.......:.:.--------------------------------------------------------------------..x......xxx:x..x...x.....---....--.:..----------------------:.......:x:....:---..x.x....:------.:..x..x.xx...x.....xxx-..x.:x...:.x.::....x::---------------....xx....:x-------------------:....:.x.:.:.x:.-..:x...........x..::x.....x...x...........::.:........x.....:..:..:.xx..:...... 36M9I42M7D73M1D15M1I27M8I15M6I14M7D9M5I19M1D43M2D6M1D8M6I28M3I23M1D15M2I27M1I47M8D6M2D11M6D6M3D17M68D26M3D4M2D4M22D16M3D10M6D23M1D22M15D12M19D16M1I79M 449/699 64.2% 741/94230402 0.0% 220/699 31.5% 53542972 NA +3219 chr4 + 190214555 108868474 108868473 108868554 81 AAGAAATCAAGCAAGAAGGAAGGAAGGAGGGAGGGAGGGAGAGAGAGAGGAAGAAAAGAAAGAAAGAAAAGAAAAAAGAAA chr4 - 94230402 59863339 59863338 59863419 34366984 34366983 34367064 81 AGGTAATCAAGATTCAAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAAAACACAAAAAAA .:.x.......xxxx...:..::..:.:...:..::...:.:...:..:.:.....::.x.:...x:...:x.x...:... 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 49005135 NA +4183 chr4 + 190214555 108868487 108868486 108868621 135 AGAAGGAAGGAAGGAGGGAGGGAGGGAGAGAGAGAGGAAGA----AAAGAAAGAAAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAA-AGAAAGAAAGAAA chr4 - 94230402 44053997 44053996 44054136 50176267 50176266 50176406 140 AGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ..:..:...:..:..:....:x.:.:.:.x:.:....x:.:----:.............:.x.....x...x:x..::..x.......:x:.x:x...::x..:x...x::.:...::..:..:.:-..x:...x..... 41M4I81M1I13M 86/135 63.7% 140/94230402 0.0% 5/135 3.7% 64814490 NA +3080 chr4 + 190214555 108868504 108868503 108868590 87 GAGGGAGGGAGAGAGAGAGGAAGAAAAGAAAGAAAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGA chr4 - 94230402 71879721 71879720 71879807 22350596 22350595 22350682 87 GAAGAATGGAGAGAAAATGGAAGGACACCAAGAAGGAAAAAAACATAGAATGACAGTGACACACTGAGTCAGAGAAATAAAAATGGA ..:.:.x.......:.:x.....:.x.xx.....:.....:..x.x....x..x..x:.x.x.xx...xx.......x..::.x... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 36988783 NA +3853 chr4 + 190214555 108868529 108868528 108868678 150 AAGAAAGAAAGA-AAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGGGAAGGAAGGGAAGGGAAAGAAGGAAAGGAAGGGGAAGGAAA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGA---TAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .....x.:.:..-........:.:::...x.::..:.x:::...:x:.:xxxx....:...:...:.::x..:..x...x.x:..::.x........x:.x.x:...:x..:x...---x..:....::.....:..x.:x.:..x:.... 12M1I103M3D32M 90/147 61.2% 148/94230402 0.0% 4/147 2.7% 64814540 NA +3232 chr4 + 190214555 108868537 108868536 108868617 81 AAGAAAAGAAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAG----GAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 7739261 7739260 7739345 86491058 86491057 86491142 85 AGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA .:.:...:.x.:.:.:::.:::....:.:.....:.....:..x.x....:..:.:----...:...:...:.....:.xx.... 56M4I25M 54/81 66.7% 85/94230402 0.0% 4/81 4.9% 101129276 89085279 +3326 chr4 + 190214555 108868545 108868544 108868640 96 AAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAAGGAAGGAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGGGAA chr4 - 94230402 44400475 44400474 44400568 49829835 49829834 49829928 94 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGA--GAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ......x....x:x.x:x.x..::...:.:.:.::...--.......:.......:.......:.:.x:.:x.:...x..:xx.x:.....x.... 38M2D56M 63/94 67.0% 94/94230402 0.0% 2/94 2.1% 64468070 NA +3923 chr4 + 190214555 108868546 108868545 108868664 119 AAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGAAAGAA-GGAAGGAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGGGAAGGAA---GGGAAGGGAAAGAAGGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:........:..:::.:..........x-.x:.::...x..:::xxx....x.....xx....x.:.::..x:...:....::..:::..---x....:...:..:.:x.... 38M1I61M3I20M 78/119 65.5% 123/94230402 0.0% 4/119 3.4% 78335382 NA +3058 chr4 + 190214555 108868567 108868566 108868637 71 AAGAGAGAGAGAAAGAAGGAAG----GAAGGAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAGGGAAAAGG chr4 - 94230402 3442080 3442079 3442154 90788249 90788248 90788323 75 AAAACAAAGGGGAACAAACAAGCCTTATAGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAAAAGG ..:.x.:..:.:..x..:x...----:x.....:....:.....::.:.......:...:.....:.xx...... 22M4I49M 51/71 71.8% 75/94230402 0.0% 4/71 5.6% 105426487 84788068 +4188 chr4 + 190214555 108868738 108868737 108868938 201 AGGAAGGAAGGAGGAAGAAAGTAAAAGGAAGGGAAGGGAAGGAAGAAAGGAAGGAAAG--------GAAGGAAGGAAAGAAGGAAGGAAAGGAAGGAAGGAATGAAGGAAGGAAGATAGGAAGGAAAGAAGGAAGGAAGAGAGAGAGAGAAAGAAGAAAGA---------TGGAAGGAAAGAGAAAAAGAAAG-------AAAGAGAAAGAAAAGAAGGAAGGAA chr4 - 94230402 4547796 4547795 4548013 89682390 89682389 89682607 218 AGAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGA-------GAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA ..::...x:....x.::..x..x.:.x:x..::..x.::..:x....x::.::....x--------.......:......:.:.....xxx...:.x..:..::..:....xx...-------..:.x......xxxx:.:.x.....x...xx.:x.::.---------.x...:..:..:.x:..x:.:.x-------.........:.....x..x....:. 58M8I50M7D38M9I23M7I25M 124/194 63.9% 218/94230402 0.0% 31/194 16.0% 104320942 85893613 +3221 chr4 + 190214555 108868802 108868801 108868984 183 AGGAAAGAAGGAAGGAAAGGAAGGAAGGAATGAAGGAAGGAAGATAGGAAGGAAAGAAGG------AAGGAAGAGAGAGAGAGA--------AAGAAGAAAGATGGAAGGA------AAGAGAA--------AAAGAAAGAAAGAGAAAGAAAA----GAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAAGAAAGGAAAGGAAGAAA chr4 - 94230402 79684109 79684108 79684323 14546080 14546079 14546294 215 aagaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCTATACATAAAGAAAATATAATTACTCCAACCACAGAAATACTGATTTTTATTGGTAGAAAACATAGCAGGGCTTTTTGAGAGAACACCACTGAATGAAAGCAAGAGAAGCAAAAACCAGATGAAAGGAAAAAAAGAAGAGACAGATGAAAGAAAAGATGAGAGCTGGGCAAGAAA .:.......::..::...::..::..::..x:..::...xx.x.:.x:...:...x.x::------x.:xx.x...:.x.xx..--------::x.::...x..:.x...:------:......--------..x.....x.......:x....----..x.:.......:......:...x...x::..:..:::.x..:..xx::.x...... 60M6I18M8I19M6I7M8I22M4I57M 115/183 62.8% 215/94230402 0.0% 32/183 17.5% 29184693 NA +3516 chr4 + 190214555 108868839 108868838 108868957 119 AGGAAGATAGGAAGGAAAGAAGGAAGGAAGAGAGAGAGAGAAAGAAGAAAGATGGAAGGAAAGA--GAAAAAGAAAGAAAGAGAAAGAAAAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAG chr4 - 94230402 30533168 30533167 30533286 63697117 63697116 63697235 119 AAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTA-AAGGCTCAAGACAAAGACCGAAATAG-AAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .::...:x..:...:.....:..:..::.:...xx.x..:....x.-..:.x.x:.::x.....--....x..-.....x...:..:......:::..x:xx:.....:.:..:..x.... 46M1D17M2I7M1D47M 78/117 66.7% 119/94230402 0.0% 4/117 3.4% 78335671 NA +4097 chr4 + 190214555 108868875 108868874 108869040 166 AGAGAAAGAAGAAAGATGGAAGGAAAGAGAAAAAGAAAGAAAGAGAAAGAAAAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAA-AGAAAGGAAAGGAAGAAAGACAATAAAAGAAAGAGAAAGGAAAGAAAAGGAAAGGAAAGAAGGAAGGAAGAAAA chr4 - 94230402 44053978 44053977 44054137 50176266 50176265 50176425 160 AGGGATATGTGAAGAATGGAGGAGAAAG--AAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGA---ACAATGCA--AAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ..:..x.x:x...::.....:.::..::--.......:..:.x.::..:.x::.:...x:..xxxx:......::..::.:.x.....x...-.x....:.x..:....---.....:x.--....x.::x...x.:.::.:.......:..x..x:..:x...... 28M2D62M1I16M3D8M2D45M 102/159 64.2% 160/94230402 0.0% 8/159 5.0% 64814897 NA +3022 chr4 + 190214555 108868891 108868890 108868969 79 TGGAAGGAAAGAGAAAAAGAAAGAAAGAGAAAGAAAAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAAGA chr4 - 94230402 16117435 16117434 16117513 78112890 78112889 78112968 79 TGGGAAGGAGTAGTAGTAGGATGGGAAAGAAAACTATTAGCAAAGGAAAGGAAGGAGGGAAAGGAAGAAAAATGAAAAA ...:.:.:.:x..x.:x..:.x.::.:.....:xx.xx.:x:........:...:.::.....:........x....:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 92751456 NA +3053 chr4 + 190214555 108868911 108868910 108868967 57 AAGAAAGAGAAAGAAAAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAA chr4 - 94230402 396746 396745 396802 93833601 93833600 93833657 57 AAGAAAGAGAGAGAAACTAATAAGGGAAAGAAATCATGAGAAGAAAAAAAAAAGAAA ..........:.....xx..x:.:.........xx.x:::......:.....:.... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 108472165 81742390 +3537 chr4 + 190214555 108868924 108868923 108869073 150 AAAAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAAGAAAGGAAAGGAAGAAAGACAATAAA--AGAAAGAGAAAGGAAAGAAAAGGAAAG--GAAAGAAGGAAGGAAGAAAAGAAAGAAAGAAAAAGAAAGAAA---GAAGGAAAGAA chr4 - 94230402 65901805 65901804 65901955 28328448 28328447 28328598 151 AAAAGAAGCCA------AAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGACAATATAAAATGGAAAAACATTGGAAGCAGAGAA ........xx.------...x.::x...:....x..:x::.x.:....x.x..........:.x.x....--:..:...:....x.:.:x...x....:--:...x.x::.....::..x...x.:x.x:...x:....:.x.---....x.:.... 11M6D53M2I27M2I42M3I11M 97/144 67.4% 151/94230402 0.0% 13/144 9.0% 42967119 NA +3427 chr4 + 190214555 108868982 108868981 108869062 81 AAAGACAATAAAAGAAAGAGAAAGGAAAGAAAAGGAAAGGAAAGAAGGAAGGAAGAAAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 25066975 25066974 25067055 69163348 69163347 69163428 81 AAAGGCTGCCAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA ....:.x::x.....x...x.:.:....x..x..::.:x.::..x..:.:..:.:............::.x......::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 83802007 NA +5689 chr4 + 190214555 108869083 108869082 108869174 92 CTTACTTTTGTTCCTGGTAAACCTGGTAAGCCTGGTTCTCCTTGAGGACCAATGAAACCTGGTTCTCCCTTTAAAAACATGGGCATATGAGA chr4 - 94230402 55321104 55321103 55321192 38909211 38909210 38909299 89 CTTACCTTTGTTCCTGGTAACCCTGGCAGCCCAGGTTCTCCCTGTGGACCAATGAAACCTGGTTCACCCTTGAAAAGCACAG---CATGAGA .....:..............x.....:.:x..x........:..x....................x.....x....:..::.---:...... 82M3D7M 75/89 84.3% 89/94230402 0.0% 3/89 3.4% 53547979 NA +5689 chr4 + 190214555 108869083 108869082 108869174 92 CTTACTTTTGTTCCTGGTAAACCTGGTAAGCCTGGTTCTCCTTGAGGACCAATGAAACCTGGTTCTCCCTTTAAAAACATGGGCATATGAGA chr4 - 94230402 55319364 55319363 55319452 38910951 38910950 38911039 89 CTTACCTTTGTTCCTGGTAACCCTGGCAGCCCAGGTTCTCCCTGTGGACCAATGAAACCTGGTTCACCCTTGAAAAGCACAG---CATGAGA .....:..............x.....:.:x..x........:..x....................x.....x....:..::.---:...... 82M3D7M 75/89 84.3% 89/94230402 0.0% 3/89 3.4% 53549719 NA +3228 chr4 + 190214555 108872675 108872674 108872773 99 AGATTTGATATATATATACACACACACACACACATATACATATATACACACACACATACATATACATATATACACACACATATATCTCTCAAAATGTCA chr4 - 94230402 4417341 4417340 4417438 89812965 89812964 89813062 98 AGATTT-AGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCA ......-.x.:...................x:x.:....::..:x:x::x::.....::..xx.x::..x..x.:.:...:....:.x..x.x...:.. 6M1D92M 64/98 65.3% 98/94230402 0.0% 1/98 1.0% 104455334 85759221 +3045 chr4 + 190214555 108872684 108872683 108872742 59 ATATATATACACACACACACACACATATACATATATACACACACACATACATATACATA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .......x.....x.:.....:....:.:x..::x.::.:.x......:......:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 91351931 NA +3717 chr4 + 190214555 108876287 108876286 108876361 75 AGTGAGGAATTCAGGGAGGGAGGGAAGGAGAGGGAGAGAGGAAGACAAGAGGAGAGAGAAATAATAGAGAGGAAC chr4 - 94230402 88698841 88698840 88698915 5531488 5531487 5531562 75 AGTGAATAATTGGAGGGGGGGGGGGGGGGGAGAATGGGGGGAAGACAAAGGGAAAGAGATAAAATAGAAATAAAC .....:x....x::..:...:...::..:...::x.:.:.........::...:.....x.x......:.x:... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 20177446 NA +10264 chr4 + 190214555 108878151 108878150 108878628 478 TAGAAAA--ATCTCTGGTTTTTTCATTTTACCATT---TGTTTTATTTTTATAAGTCATTATCAATTAAAGGAGTAAAAAAATTACTTTTTAACCCCTCTAAAAAAACCTCTAGTATACCAGGTTAAAGCAGGTAATATTTTCCATGATATTTATTACCCCCGAGAAGA----------TCCAGTTTTCATTGCCCAATAAATAGTACAGCAGGGCTTAAAAAATATGTGCTGATCTGCCTGGGTGCCAAAAGCAT-------CACCAATAATCTTGATTAACGTGTCTTGACACTGAATGCATTAGCCACATAATATTCCTCTTGCTTAAAGGCTAATTAGAATTCAAGGCAGCATGATACCTGCTTTTGAGGATTACAGTAAGAACATTTGTTGTAATAAGAACCACCAGGCAGCCAGTTTTG-------GTAATGATTGATACGTAAAATTATTGAGGGGAAAAAAGAATGAGAAAGTAGAGTCTGCCCCCAAAACATTTATTT chr4 - 94230402 55326314 55326313 55326744 38903659 38903658 38904089 431 TAGAAAAGCAATTCTGGTTTTG--AATTTCCAAATGCATGTTCAGCCTTTATGATTCATT-----TAAAAAAAACCAAAATATACTTCCTCAAAACCTGTCTAAAACCCTGAAGC-------TTCACAACTAACCCTACTTTGCATGACATTTGTTGCTCTTTAGTGAACTGATTTTCTTACTGTTTTTACTACCT------------------GCTTGGAACATATG--CTGCTTTAGACGGGTGCTAAAAGAATAATTCTGCAGCAATAATTCTGATTAACT----------CTGCATGCATTAGTCACATCAAATTCTTCTTACTTAAAGGCTAATTATAATTCAAGTCAGCATAGTACCTATTTTTGAGGACTAGAATAAAAACACTTTTTGTAATAAGCATC---------TCATTTTTAATTCTTTGCAATGACTGATCTGCTAAATTATTA-----------------------AAAGTCTGGCCCCAAATGATTTCCTT .......--.x:.........x--.x...x.x.x.---....:x:::.....:.x.....-----.x...::.::x....x..xx:.::.:..xx...x.xx....x...xx..:-------x.:.x.:.x:::xx..:...x.....:....:..:.:.::x..x::.----------.x.x.....:.:.:..:------------------....::..x.....--...x.:.:xx:......:.....x..-------..x.......::........x----------...x.........:.....x.x....:....:...............x........x......::.....::.........:..x.:...:....:..x..........x.:.---------:..x....:-------.:.....:....x:.:x........:-----------------------.:......x.......xx....x:.. 7M2I13M2D11M3I22M5D50M7D47M10I17M18D14M2D26M7I21M10D113M9D9M7I26M23D26M 287/402 71.4% 431/94230402 0.0% 105/402 26.1% 53551837 NA +9392 chr4 + 190214555 108881230 108881229 108881609 380 GAGGTGATAGATAGATGAGTCTGCTGTCTGTATTTAGGCACTTGGCTCATTTCCTGAGAGCTGTGG---AAGGCATGTGGATGCTCATTAAGTTTCCAACCATTCCCCGAGAGCAACAGCTGGTGAATCAAAGCTTCCCTGGTATGTCATGACTGGTTTCCTCAAAGTCTTGGAAATAATGGATGGCATTCACATGCTCTCTGTAGCACCAACAGATAA----GAAGGAGATGAATAGCAACAGGAAGCATTTCCAAAGCATAAAGAAACACACAG-------GTCTAGGAAGATTATGAGTAATGCGCTTGCTACCACACATTCTATATCCATATATGGTGGTTTCA--TCTTTTAAATACTGCTACTCGTTCAAACTATGAAATCATAGTTAAC chr4 - 94230402 55329261 55329260 55329651 38900752 38900751 38901142 391 GGGATATCAGAGTGATGAATTAATATTCTGTGTTTAGGTGCCTA-CTCGGTTCCCAAATTACATGGTACAACACATTCAAGGGCTCATTAAGTTTCCAGCCATTCCTAAACAGCAACAGGTGCTTGAAAAACACTTCTCCAGCATGTCACAGACAGCTTCATCACTGTCTTGGAAATAACTGACTGCACTTGTGTTTCCTCCATGGCACTAACTGACAATGTTGAGAGAGAGAAAAAG-AACAGGAAGAACTTCCAAAACATCCGCGTGGACACAGCGAATGAGTCTAGAAAAATAATTAATAACAACCCTGCT---GCATACTCCGAATTCTGATGTGATACTTGCATGTCCATCCAGTACTGCAATCCATTTGGATCCTAATGTCATGTTAAAC .:.:.:x:...xx.....:.:x::xx.....:......::.:.:-...:x....::.:xxx::...---..x:...x::::x................:.......:x:.x........x..x.x:.xx..x:....:.::.:......:::x::.:...x...xx.............:x..:x...:.::::.x::...::.:....:...x..:..----..::....x:..x..-.........x.:.......:...xx:x:x:x......-------......:..:..x..x.:...::xx.:....---:..:.:..::x..:.xx..:..:.:x..x..--..:x.:x.:......x.::.:..:::.::x.:.x:....:x.x... 44M1D21M3I150M4I15M1D37M7I31M3D31M2I46M 232/375 61.9% 391/94230402 0.0% 21/375 5.6% 53551969 NA +6370 chr4 + 190214555 108884171 108884170 108884284 114 TATTTACCTTTATCCCCGGAAGTCCAGGAAGCCCAGGAAGCCCTGGTTCACCCTACACAGGAAAATCATATAGCATTATAGAATGATATTCACTCAGTCACAATATGTGGAGAA chr4 - 94230402 55332173 55332172 55332285 38898118 38898117 38898230 113 TATTTACCTTTATCCCAGGGAGTCCAGGAAGCCCAGGAAGACCTGGTTCACCCTACATAGGAAAATTGCATAATATTACAG-ACATTATTCAGTTATGGTCACTACGCAGTGAA ................x..:....................x................:........:::...::....:..-.::x......x.:.xxxx..x..:.::.x... 81M1D32M 89/113 78.8% 113/94230402 0.0% 1/113 0.9% 53551998 NA +4312 chr4 + 190214555 108886335 108886334 108886443 109 TAGGACAACTGTGTCCAACCCACAGCCCACGGGCCACATGCAGCCCAGGATGGCTTTGAATATGGCCCAACACAAATTTATAAACTTTCTTAAAGTGCTATGAGATTTT chr4 - 94230402 75796533 75796532 75796638 18433765 18433764 18433870 106 TAGGGCACATGTATCCAACCCAGGGCCCACGAGCTGCATGCAGCCCTAGACAGCCAGTAATGTGACCC--CACAAGGTCACACAC-TTCTAGCATTACTATGTGATTTT ....:..xx...:.........x:.......:..::..........x:..::..:xxx...:..:...--.....:x.:.:.x..-....x:x.x.:.....x...... 68M2D15M1D23M 76/106 71.7% 106/94230402 0.0% 3/106 2.8% 33089802 NA +3926 chr4 + 190214555 108889068 108889067 108889295 228 CCTTTTAAAATGCAAAACAACAATA----ACACTCTGTAA-----TGCAAAACATGAAA---ACCGCATCATTTTGTAATAATTGTTTTCATATTACACAGTGGATGGTAGATATAAAATGGTGAATATGAGACAGTAGGAACACACTAGAGATAGAGATATTACCTTTTGCCCTGGACGACCAGATTCCCCAGGTTCTCCCTGGCCAAAGAAAACCAAAGAT---------GAAAAACACAGTCTTAA chr4 - 94230402 55335953 55335952 55336190 38894213 38894212 38894450 238 CTTTTTAAAATACAAAATGATCATACACCACACTGTACAAGCTGCTACACAGCATTGCATTGAGCTCATCCTAGTGTAAAAACAGTTT-AACATAGCAAGACTTATCACAAATCCAACA--GTGAA---GAAAAAGAACACAAACATT-----TCCAAGTAATACCTTTTGTCCAGGCCGTCCAGATTCACCAGGTTCACCCTAAACAAAAGGAATTAAAAATAGGGTTGGGGAAGATCACAACATTAA .:.........:.....::.:x...----.....x.::..-----.:..x.:...x:x.---.x.x....x.xx.....x..:x....-x.:..x:..x:::xx..x::.:..x:..x.--.....---..:.x..x.x:x.x...:.-----.xx.::..x.........:..x..x..x........x........x....::x....:::..::...:..---------...:.x....::x.... 25M4I11M5I14M3I26M1D30M2D5M3D19M5D70M9I17M 144/217 66.4% 238/94230402 0.0% 32/217 14.7% 53553115 NA +4622 chr4 + 190214555 108889673 108889672 108889764 92 GTACAAATACTTGCAAGGTTATAGTTACCTTAATTCCTGCAGCAGATGATCCAGGGTCACCCTAAAACGAAACCCAGGAGAGATTATCTCAC chr4 - 94230402 55336252 55336251 55336342 38894061 38894060 38894151 91 GTACAACTGCTTTGAACACT-TAATTACCTTAATTCCTGCAGCAGACGAACCAGGGTCACCCTGATAGAAAATCCACAAGAAATAATCATAC ......x.:...xx..x::.-..:......................:..x.............:.x.x:...:...x:...:..x...x:.. 20M1D71M 70/91 76.9% 91/94230402 0.0% 1/91 1.1% 53553421 NA +10373 chr4 + 190214555 108891908 108891907 108892273 366 AGAAAAAGACAGTTTCTTGAAAGGCCAATATATTTGTGGAAATCTGAGCAGTTCCAT-TTGATGGACAACTAAGGGTGATTTTTTT--TTTCTTTTTTAAAGACTTAGAACTGTGAAATCTCATGGAATTTTTATAACTTTTAAGTGGTAACATGACTGCTGGAAGACAGTCATAAGTTAAACATTTTAAAGGATAATGCT---------GAAATAA-AACAGTGTGTGTTTATAATCCTCCTTCCCCACAAAGTAAAAATGAATACTGGATTAAAGTAGGGGGAAAAACCCCAACTGCGTCTTAAGTATACTCTTAGCT---TCATAAGTCAGTTGGCTTGGAAAT--AAAAATTTCTACAGGGTAAGTTATAGAT-GAGGAAA chr4 - 94230402 55337589 55337588 55337961 38892442 38892441 38892814 373 AAAAAAAGTCAGTTTTATGAAGGGTTGATTCATGACTGGAAACCCGAGCTGCCTCTTCTTGATAGACGTGCATGAGTGATACTGCTGATATCCCTTACAAGCATGTACAACTGCAAAGCTTCAGGGACTTTTTATAGCCGTAAAGTGGCAAAGCAACTGGTAAGAGACATTCACAAGTTAAACATTTTAAAGGATAATGATTGATATGGGGAGATAAGAGCATTAAGTATTTATAATCCACCTTCACATAAGAATGAAAATTAATATGGGATTAAAAGAAAAAAATATGGCACAGCT------------TGTTCCCAGTTCTCTGATGAGTCAGACCGTTTGGAAATGAAGAAATTTTAGCAGGGGAACATGCAGACAGAAGAAA .:......x......:x....:..:::..x:..xxx......:.:....x.:::.x.-.....:...:xx:.x.:.....x:.x:.--.x..::..x:..:x.:x..x.....::..:::...x...x........:.:x.x......:..x:::....x.:::.....x...:.........................x.---------..:....-.:..x.:x..:..........x.....x.xxx.:.:.:.....x....:x........:x.:::::.x.x:x.x..:..------------.::..::..:.---.x..:......x:x.:........--.:......:x:.....x..xx.::...:-..:.... 57M1I28M2I113M9I7M1I79M12D11M3I24M2I28M1I7M 238/354 67.2% 373/94230402 0.0% 31/354 8.8% 53554319 NA +3931 chr4 + 190214555 108896607 108896606 108896715 109 TAAACTTGAAGTATATTTCTTGCTCACATATGTACCCTTTCATGTCTTACAAA-ACTGTACCTTTTCGCCTGTGTCACCCTTGGGGCCGTTCTCTCCAGCGTCTCCCTGA chr4 - 94230402 55342147 55342146 55342251 38888152 38888151 38888256 105 TAGACTGTAAACACATCTATGGC--ACATGCTTTCCTTTCTA---CTAATAAGTAGCGTACCTTTTCTCCTGTGTCACCCTTTGGTCCATTTTCTCCAGCATCACCCTGA ..:...xx..::.:..:.x.x..--....::x.x..:..::.---..x.:..:-.x:..........x..............x..x..:..:........:..x...... 23M2D17M3D8M1I56M 76/104 73.1% 105/94230402 0.0% 6/104 5.8% 53554460 NA +3877 chr4 + 190214555 108918164 108918163 108918228 65 GAACTCACCTTTTGCCCATTCATCCCTGGAATTCCAGGTGCTCCAATAGAACCCT------AAAGAGACAC chr4 - 94230402 55363181 55363180 55363251 38867152 38867151 38867222 71 GAACTCACCATTTGTCCATCTTTCCCAGGAACACCAGGCACTCCAACAGAACCCTGGTGGGAAAGAGACAC .........x....:....::x....x....:x.....::......:........------.......... 55M6I10M 54/65 83.1% 71/94230402 0.0% 6/65 9.2% 53554983 NA +21939 chr4 + 190214555 108920063 108920062 108920911 849 CTCCAGCAGAATTTAATCGTCAATTCTGATGATTGCGGATAACAATGAAATGACAATCAGGAAGTCACTGTTCAGGTTACCTCAGCAA-AGAAGGACACCAGTAGGCTACTTGAATATAGTGAACC-------------CAGCAA------TATCCTTTTTTT----GGGCTCAGTTCTCTGGCCGTTTGGCAATCATATAATTGAGGAAGGCCATGCATTCATTTTGCAAT---ATCAAATTATCTTTCACA---TTTTAAATTTTGT--CAT-GTTTTACCAGTATTTGAATTAAAATTCAATAATG-----------TACAAGTTCAGCAGACAACTTAAAAAGAGTCTGCTCTTGGATTTATTGAATTTTTTATAATGGAGTAAATTAGAAATCTAATG-CTCACATTATGTGACTATATTTTTAGAAAGCAGAATACACAAACCAGACTAACTGCTTCAGCATGGCTTACAGTAGCTAATTTCATTCACCTCTCCTGCTTGCCATTAGG-TCATGAGAGCATAATTACTTTCACAATATTGTTGTTTATACTCTACCTTTTGTCCCGGAGGCCCTAGAGGACCCTAAAAAAGAAAAACGATTCAATTAACATACTATTG---TAGCCA-TTTAAGCTTAGATGACCAATTTAAACTGTCCTATTCTCTAAGATTCTCTT----TGCTGTACTGAAATATGTTGACATTTCATATATCAGGAAAAAAAAAGAAAAATTTCAGTTTGAAGTTCCAAGTGGATCTTTTCTTCTAATTTTCTTTTGAAAAACATTAAGC--ATATGCAGCAGGATTCTGATTTCTCCTCTCTATTAAAAAATAATCTTTGCTGTTCCAGCACATATTGTTTTTTTAAAAAATACCTATAAATGTGTCA-CATCAA chr4 - 94230402 55365407 55365406 55366269 38864134 38864133 38864996 863 CTCCATCAGACTGAGGCAGTCAGCTTTAATGAGTGCAAATAATGCTGAAAGCATTCATAGGAAGTCACATCTCCGGTTACCAAAGGAACAGGAAGACAACAGCAGACCACCTGAATACAGCCAACCAAGAACCATTTATCAGCAACACCTATATCCTTTGTTTCTGTTGGTCATTTTTTTTAGTCATATGGCATTGATCTACTTGAGAAAGGACATGCATTCAATCAGAAATTCTATCTCTCCATCTTTCACAATGTTTCACCTTTGGTTTCATAGCTGTACTAGTACATGAATGAGAAAATTATAGCGACCTTTTCACCTGAAAGTTAAGCAGACAGATTAAAAACATTCTGCCCT-GCATTGCTTGAACTTCCTATGGTGGGGGAAATGAGAAATCTTATGTCTAACATTATATGACTACATTTTGCAAAAACAAAATTCAGCATCTAAATTAACAGATTCAAGGTGGTTTGCAGTAGCTAATTCCATCCACCTTTTTCACTTACAGTTTGGAACAAGGAGATATAAT---------GGTATTGTTGTTTATACTATACCTTTTGTCCTGGAGGCCCCTGAGGTCCCTGCAAAGAGAAA----------TAAAATGTTATTAGTCTAGCTAGTTTAAACTTGAATGTCCAATTAAAACTGTCCTATTGTGTA--TTTGTATTCAGATACTGGACTGACACCAGTAGAAATTTTCTGCACC---AACAGGAAGTAAAATGTTCTGCAGAAAACGCACAATGGATCTTCTC---------TCTTTTGGAACAGACTTAACTTCTAAGCAG-AAGATTCAAACTTCCCCCGCCCCTT----CCTAACATTTTCTCTTCCATCCCATCTATTTCTTC----AAATACTGACAAATCTGTCAGCATTAA .....x....x.xx:::x....::.:.:....x...::....::x.....xx.:xxx:..........xx:..x.......xx..x..-..:.:....x...:..:.:..:......:..:x....-------------......------........x...----x..::xxx..:.:.:.:.:.x.....x.x..x..x.....:....x..........x.:x.x...---...xxx::..........---...:.xx...x..--...-.:.x...:....:x.....x.:..xx:x...::.-----------.:x.....x........:x.......x.x.....:..-.x...xx.....:..::...::...:.x....x........x...-..x.......:......:.....xx:...:..:...x..xx.x.:.:.:....x.x....:x:...:..:............:...:.....:.::::...:.x:..x..-x..x.:::::.....---------::................x............:........:x....x....:x...:::...----------...x..::....:---....:.-.....:...::...x......x.............x.x..--x..x.x..----.:...x.....x.:xx..x..x....:x.::.:.---..x.::..:x....xx...x.:xx:..::x.xx.:........:..---------.......:..x.x.:.x.:.--x..x....-.:.....x:.:...:..:x:.:x..----xx...:x...x..x.....x.x...x.xx..:..:----......:x.:....x.....-...:.. 88M1I37M13I6M6I12M4I65M3I18M3I13M2I3M1I34M11I37M1D45M1I110M1I15M9D62M10D13M3I6M1I40M2D8M4I34M3D46M9D20M2I8M1D25M4D35M4D20M1I6M 564/806 70.0% 863/94230402 0.0% 100/806 12.4% 53554656 NA +3351 chr4 + 190214555 108937792 108937791 108937852 61 AAACTGAGA---TACTTGCCATCAAGCCTTGTTCTCCTGGCTTTCCTGGTTCACCCTTAAAAAA chr4 - 94230402 55383260 55383259 55383323 38847080 38847079 38847143 64 AAACTGGAAGAGTACTTACTGCCAACCCTTGTTCACCTGGCTTTCCTGGCTCACCCTACaacaa ......::.---.....:.:::...x........x..............:.......xx..x.. 9M3I52M 49/61 80.3% 64/94230402 0.0% 3/61 4.9% 53554532 NA +3556 chr4 + 190214555 108937792 108937791 108937852 61 AAACTGAGA---TACTTGCCATCAAGCCTTGTTCTCCTGGCTTTCCTGGTTCACCCTTAAAAAA chr4 - 94230402 55377232 55377231 55377295 38853108 38853107 38853171 64 AAACTGGAAGAGTACTTACTGCCAACCCTTGTTCACCTGGCTTTCCTGGCTCACCCTACAAAAA ......::.---.....:.:::...x........x..............:.......xx..... 9M3I52M 50/61 82.0% 64/94230402 0.0% 3/61 4.9% 53560560 NA +5995 chr4 + 190214555 108940533 108940532 108940648 116 ACTCACGGGTACTCCTGGCATTCCACGGGGGCCATCTTTCCCTGTGTCCCCAGGTGGCCCTCTTGGGCCTGGAGGGCCAGGGGGTCCTGGAGGCCCTGCCTGTCCTTGGTCACCCT chr4 - 94230402 55387952 55387951 55388067 38842336 38842335 38842451 116 ACTCACCGGAATGCCAGGCATCCCTCGAGGACCATCTTTGCCAGTATCTCCTGGGGGACCTCTGGGTCCTGGTGGCCCTGGAGGCCCAGGGGGTCCAGCTTGTCCTTGGTCCCCCT ......x..x.:x..x.....:..x..:..:........x..x..:..:..x..x..x.....x..x.....x..x..x..:..:..x..:..:..x..:...........x.... 116M 87/116 75.0% 116/94230402 0.0% 0/116 0.0% 53552581 NA +26764 chr4 + 190214555 108941301 108941300 108942418 1118 AATAGGTACA-CAGAGCAATAACTGA-TGTAAAGAAGAAATCAGACTTCAGCAAGAATAAGCACTACCTTAATCAGGCGGCGTTTAATGAGCTGCTGATCAGCAGAGAGAAACCCATGATTGATTTTAGGAAACACCATCTGATCAGTCAGTTGAGGTCAAAGGTTGAAGTTCAGAGATGAGAGAGTTGAAGAATAGACATCAGAAGGCCCCAAGAAAGAAATAAAGATATCCACATTAGACTTATAATGATTATTAAACAAAATAGAACTGGCACTTATGTCTAACATTAGACCCACT---GGCTCTTCTTGAAAGAAATATAATCCTGAAATGGGATGCTGAGACCAGAACTTCAGTAGTAATGAATATTTTTTGTGCCTCATCATTTCAC-TGTGGATGTTGGACCTTTTT---AATGTAGTTTATTCCCAGAAACAGGTAAGCAAGTGCACCCCTGCATTCTTCAGTCTGAGCAGAAAGTCTAGAGACAAAATGCCAGTTCCA-TTTCCGTCAGACTTGTCAACCAGCATAATGTGGCGTGAACTCAACTGCCATTTTATTGACGCCTGAAGT----------CCAGAGAGAGTACTTAGGATTATTTAATTGACTGGAAAAATATTACAGAGCATTAGAATGCTTGTAAATTAAGC------CATC-AAGGCGTGGCA-TGGTTCTAGATTGCTATGCCCACCTCTGTTCACAGTACCTG-----TTTGATGTCAATATCCTCTCAAGTATGCTCAGGATACACCCTCTTAATAGATATT-TGACCTCAATGATG----------CAAGTGGGGT--------CCCAAGTGCC--------------------CAGT----AACTTGAT-----------------------ATATACCATGAGAGGAAGCCAACGGGCTCGGC--AAGCCAATTGAATGG---------------------------------TTCCTGCTCACGCTTATGCTGAT---TGCATTTCTGACTGTGCAGGCATGAGTGACAACCACAAACCTTGACGGTGAGGATCTGATTACTGTGCAGGGCAGCAACTGTGGGGAAGCCTGGCAGGCCCTATGGACATAGCACA-----GCACCAAAACAACACGACATAAAACGTCACACAGACATTTCACTAGGGGACAAACAAAACAAGCAC----------ATACCTAGCACCTCCCTTTCCTGGGACTTAGAAGTCTTGCCTCATCTGACATACCATAAACAAAATTA chr4 - 94230402 55388874 55388873 55390070 38840333 38840332 38841529 1197 AAAAGGTACAGCAGAGAGTAAATTGAATGTAAAGAAGAA-TCAGATTCCAGTGAGATGAAGCACTACCTTAATGAGGCGGCGTTTAATGAGCTGCTGATCAGCAGAGAGAAACCCATGATTGATTTTAGGAAACACCATCTGATCAGGCAGGTGAGGTCAAAAGTTGAAGATCAGAGATGAGAGAATTGAAGAATAGACATCAGAAGG-CCCGAGAAAGAAATAAAGATATATTCATTAGGTTTGTAATAGCTA--AAGTTATAT-GAACTGGTGCTTCTGCCAGAGAGAAACTGTGCTTTAAGCGCTTTGTGAACTCATCAT--------------ATACAGTGAGCTAATTGTC--------TAAGTCCTTTCT---CCCCAG-ATTTCACAGGAGAATTCTTCACTTTTTTTCCCCCATAATCTAGGCTCTGAAAAA---AAATCAGTATTTTTGCGTGTTGTTC--TCTCAGCAAAGTTTCTAGACACAAAGCACCAGTTCAACTTTCAGTCAGATTTTCTAACCAGCATATTGTGCCATGAACAATGGTGTCATTTTAATAAGGACTGGAGCTCCAGCTTGACCAGATTGCTCAATTCTTCCTGCTTAATT---TGCAAATGCATTTTGAAAAAT--GAGCACATACAGATTAAACTTCAGATATCTAACACATAGAACTGACTCTTGATT-------CAAC--CAGTACAGAGTTCTTGACATTTTTGATG----------CTCCTGTATGCCTCAGGGAAGCAGAACTACTGAAAATTCTGATCTGAAAAATGAAATGCTGACCAAGAAGAGCACATGGAACATGGGTGCTGCCGGGGGTAACGCTGTATGCAGTTATGGATTTGATCCCATGCTTTGCATCAGAAATGCATACACCA-ATGAGAAGGCAGAGAGGGTTGACTTAGGTCCACCATAAGGATTTGTGGCTATCACATAGTAGAAGTCATTTTTTTCATGTGCACTTTTATGCTGATACAGAGAGACCTGACTGAACAGGTAC--ATGTCAACCACAAACCTTGACGGTGAGGATCTGATTACTGTGCAGAGCAGCGACTGTGGGGAAGCCTGGCAGACCCTAGGGACACAGCATAACATGGTACCAAAACAACACAACAC-AAACATCACAGAGACAATTTACTGACAGACAGACAGAACAAACACTATCTTTAGTATACCCCACATCGCCTACTGACAGGAAACA--------GCCTC-TCTGTCATATGGGAAACAGAATTA ..x.......-.....x:xx..:...-............-.....:.:...::...xx...............x.........................................................................x...x..........:.......x..............:......................-...:..................x:x......::..:....:::..--..::x.x..-.......::...x..:.x:.x.xx.:x:x::..---:..x...:x....xxx.x:..--------------..:.x.x..x.x:.x:x..--------.:.:.x:...:.---..:..x-.......-x.x.:..x:.xx..:.....---xx::..:.:..xx.:.x....x.---..::x...::x:::x:.::..x...--...x....:.:xx......x.....:::.......x.-....x......:..x::..........x....x.:.....xxx:x..:.......x.:.x.x...:..:----------.....xx.xx:.x..xxxx:.::......---..x...x::...x:::.:x..--..:::.x.::.:.....:.------:...-..x:.:.:.x.-..::...x....-------.x..--.x..x..x...x.:..-----.......----------...xx......::x:.:x.x:.xxxx:..x.::.x...-...:..x..x:...----------....x:.:.:--------.x:::....:--------------------....----:.:.....-----------------------...:....-:x...:.:..x:.x:..x.:.:.--.:.:.x.:::x.x..---------------------------------...x..:x...x:..........---x:x.xx:.......x:....:.:--:..x.........................................:.....:....................:.....x.....:....:.-----.:.............:...:-....:.....x.....x..:...::x:....:...:.....:...----------.....:x:..:.x..:x:.xx::...xx:.--------.....-....x....:x:x.....:..... 10M1I15M1I12M1D168M1D45M2D9M1D33M3I21M14D19M8D12M3D6M1D7M1I20M3I23M3D25M2D37M1I69M10I29M3D21M2D19M6I4M1I11M1I12M7D4M2D16M5I7M10D38M1I14M10I10M8I10M20I4M4I8M23I8M1D23M2I15M33I23M3I23M2D91M5I20M1D45M10I30M8D5M1D24M 752/1045 72.0% 1197/94230402 0.0% 225/1045 21.5% 53552427 NA +4666 chr4 + 190214555 108944281 108944280 108944365 85 GAAATGCTACA--AGTTTGAAAACAGATGTATACAATTTGCTTTTGTTTTACTATGGAATATGAGTTTAAAATGTTATTAGATGGTA chr4 - 94230402 55391516 55391515 55391602 38838801 38838800 38838887 87 GAAATGATACCCCATTTAGAAAACAGATGTATCAAATTTACATTTATCTTATTATGGAATATAAGTTAAAGAAGTTATTAAATGGTA ......x...x--.x..x..............xx.....:.x...:.:...:..........:....x..:.x.......:...... 11M2I74M 69/85 81.2% 87/94230402 0.0% 2/85 2.4% 53552765 NA +8718 chr4 + 190214555 108944281 108944280 108944530 250 GAAATGCTACA--AGTTTGAAAACAGATGTATACAATTTGCTTTTGTTTTACTATGGAATATGAGTTTAAAATGTTATTAGATGGTAATGTGCCAGCATCTTTCCATCTGTGACTCATTAGCCCTATATTACACA------GTCAGAATTTTATATATAAACCTCATATTTATGTAACAAAGAACAAAAACAGATACAAACAAGAAGTCTATGAGGGATCAGAATCTTGATTAG-TGGCGATAAATCATAATGTCACTT chr4 - 94230402 55392369 55392368 55392620 38837783 38837782 38838034 252 GAAATGATACACCATTTAGAAAACAGATGTATCAAATTTACATTTATCTTATTATGGAATATAAGTTAAAGAAGTTATTAAATGGTACTGTGCCAGAATCTTTACATCTGTGACTCATTAGTCCTGCTGTGCACATGGTTCATCCCTCTTCAAGCTAAAGCTACAATACCCATGT-------AATGGAAATGGGTACAAACAAGAAACCTACAGAAGATCTAAAATCTGAGCAGAAAGCAATACATTTTAGGGTTGTTT ......x....--.x..x..............xx.....:.x...:.:...:..........:....x..:.x.......:......x........x......x.................:...::xx.:....------:..xxxx..:x.xx..x.:x:x:x...:::....-------..:::...::.:............::...:::::....x:..x::...x:..-x:..:...x..:x..:x..:::.. 11M2I122M6I34M7D52M1I24M 169/243 69.5% 252/94230402 0.0% 16/243 6.6% 53551912 NA +3139 chr4 + 190214555 108947434 108947433 108947492 59 CTCCGTCTCAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAAGAAAGAAAGAAAGGTGAGA chr4 - 94230402 59404632 59404631 59404690 34825713 34825712 34825771 59 CCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAAATATGAAA .:..x:.:...........:.............x.x....x:x..x......x:...:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 49542802 NA +3990 chr4 + 190214555 108949609 108949608 108949691 83 CTGCAACCTCTACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCCCTCAAGTAGCTGGAACTAAAGGCGTGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.............x...x.xx.x.......::.................x.--....::....:::. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 90752483 NA +10256 chr4 + 190214555 108961942 108961941 108962173 232 CTCCCTTAGATTTTTCTTCC--CCTGCCAATAAACAGAATATTCA--GGCTGACATGTTCTTTTGAAGACATCGCAAATGAGACAGGAATTACCACCTGTTGTTCTCTTGTCCTTCCTAATGTTACAGTTAGTTCCTGCCATTTCCCGTTGCATCCCACAGGCTTCAAGCCAGGACAGCACTCTCACTCTGCCATGGCAATTTCTCTCTCTCTTTTTGTTTTCCACCACCATTTCT chr4 - 94230402 55394138 55394137 55394369 38836034 38836033 38836265 232 CTCCTTAGGATTTTCCTTCTGACCTGCCAATAAACCCAAGCTTCACAAGCTTACATGTTCCTGTGAAGACATGGTAAATGAGACAGGAATTACCACCTGCTGTTCACTTGCACTTCCTAAGGTTACAGCCAGCTGCTGCTATTTCACATCAAATCACACAGGCTTCAGGCCAGAGTGGTCTTGACACCCT----TTATGACTGCTTTCCCTCCTCCCCAACACCACCTCCAGTTCT ....:.x:......:....:--.............xx..xx....--:...x........:.x.........x.:........................:.....x....:x........x.......::..:.x....:.....x.:.::x...x...........:.....::::.:x:.xx...:..----.x:::.:.x..:..:...:.:::xxx:x.....x...x.... 20M2I23M2I143M4D42M 167/228 73.2% 232/94230402 0.0% 8/228 3.5% 53567804 NA +10602 chr4 + 190214555 108964910 108964909 108965333 424 TTTCCATTGTGTTATATCCATTCCCTTTTCTCAGGCAATACATTCAGTACCCAATGAGTAGTATATTCATTAAGGCTACAGAGAAAGGCAAGGGTTAAACAAATAAGGACATCAAATTAATATCCAGGCCTAAATGTTTTAGCAG-AGCCAAAAAATCT-TTAATCATTCAAGTCAACAAAGGTTAAGATAATAAAATAAACTTCTAAATGCTTTCCTTTT----CTGGAACTTAATCTGTCTTGCCAAAGATGTTTTTAAGATGCTATCAGTTTTGCATAGTCCCAGCTGTTATGAAAATTTACTCGAATACACTAGGAGGAGAAAGGAATTTTATGAAAATGTGAAGCAGAGCTTCTGGGTGGCTTATTGAAACTGTGAGAGCTTAGGACTCATTTAAAACCAGCTGTTGGCTGATGATGTCGAGACC chr4 - 94230402 55397484 55397483 55397880 38832523 38832522 38832919 397 TTTCTATTGCAAAGCAGTGATTTCTCTTCAGCAGGCAGTA-----AGTA---AAGAGTTAATATATTAAACAAGA------GGGATCAAAAGGGTTAAATAGAAAAGCGCATTATATCACTATCTGAGCCTATCTGCTTTAACAGTATATAAAGAACCTGTTTAACCCTCAAGACAATAAAGGTTATCACAGTAAAATAAACTTCTGAATACTTTTTTTTTTCCCCCTCAACTTAATCTCTTCTGTTGCAGAAGTTTGAGAGATTTTATCAATTCTGTGCAAAGCCAGCAGCTGGGAAAGTTTACTTAAATAGAACAAAAGGAGAGAATGATTTCATGACAATCT----------TTTAGTGTGACTTCTT---ACTGTA-----CTACAACCAATTTAAAG-CAACTGCTAGCCACTGATTTCTAGACC ....:....::xx::.x:x...:.::..:xx......:..-----....---..x::x..:......x.x:...:------:.:.xx:x..........:.:.x...x:...:.x..:.x....:::.....xx..:....:...-.xx:...:..:..-..x.x.x:.....x...:........xx.:.:..............:...:....::....----.:xx..........x.::..:::x...x....xx:....x:.....:..:..:::.:xx.....x.:.:x....:......::....x.x:.::......:.:x:....:....x...x.----------..:x.x...:...x..---.....:-----:..x:..:x.......:-..:...:.:..::x....x..x..... 40M5D4M3D23M6D64M1I13M1I61M4I120M10D16M3D6M5D17M1D27M 261/391 66.8% 397/94230402 0.0% 39/391 10.0% 53567426 NA +3414 chr4 + 190214555 108966845 108966844 108966956 112 TGTCTTAAAAGAAAAGAAAGAAAAGAAAAGAAAAAAAGAAAAGGAAGGAAGGGAAGGGAAGGGAAAAAGGAAAGAGAGAAAAAGAGAGAAAGAAAGAGAGGAAAGAAAGAAA chr4 - 94230402 22558735 22558734 22558846 71671557 71671556 71671668 112 TATCCCAGAAGACAAGAAAAAAGGGAGAAAGAAGAAAGAAGATTAAGGAATGGCAACCACCAGAGACTTTTAAAGGATGTGAAGAGGGAAAAAAAAAGAGTCAGAAAAAAGA .:..::.:....x......:..::..:..::..:......:.xx......x..x.:xx.xx:..:.xxxxx..::..x:x:.....:....:...:....xx.::...:.:. 112M 68/112 60.7% 112/94230402 0.0% 0/112 0.0% 86408110 NA +7657 chr4 + 190214555 108973663 108973662 108974582 920 GAACGGAGCCACTACATCATTGAAACAGTATGTCTGAACATTTGGGTAATAAGGCACAGATGTGAAGTAGAG-GACTTGGCACTACCAAGGTAACAACAAAGCATTCACCATTGTGTTATAATG---------GTTAAAAGGGCCAC-ATCTGAGAAGCTTAAAAGAATGCTCCCTCCTACCTGCAATGCTAAATTGTATTACACCTTTTATCTGCTTAAAAATCTATAAAAACTAGAAATTCAAATA--------AGTATCATGCAAACTTATGGCAAAGAACAAATATGTAAAATGCACTGATAATTTTATCTGTAAAAAAACATTTATGCAATAGCACGTAAGGTTTAACTGCAGCAAAAGGCCAAATTCAATAGAAATCCATATGGCCTCTATGTTGTGAAACAATTCATGCAAATC-TGAAGGACTCAATAGTCACGGGAAAGGTGGCTGCTATTGATTCTTAGAAGTGATTCTGGCCCTTACTCAATATGTCTAA-TTATTGTAGAATT-TTCTATTTATAGGCATCAAGTAAAGATAATGCAACAGAATACATCCAAATCGTTAATCAGGTTTTTT--------------TCACTTACAAGTGGTATGGTATTTTTGCCAGCCATTACTGAACCATGTGGCACAAAGGCAGTTATGAAGC---------TGGGGTACTTTCATTCAATAAACTTGGAGTTAGAAACTAATTTTCCGCCCAAGATAGGTAGAGCACAAC-----------------TTACCCTAGGTCCCTGATCACCTTGTTCTCCCTGTAGAATAGAAAGGTGAGATAACAGTTTTAGCCAAAATTTATACATGATGTTCA------TTAAA------AAGATCAAAATG---TAACACAG--------TATAGGTCACGCCAATATGGATCTTCACTAACTT------TATTTCTGGTATGCATTTTCTTACCTTATCGCCTTTTGGACCAGGAGGGCCCTGAAAAAAAGAAAGAGAAAAAA chr4 - 94230402 55400767 55400766 55401720 38828683 38828682 38829636 954 GAAGGAAATCACTGTAT-ATTAGAACAACATAACCAAACATCTTC-TAATGAAGCACAGATGTAAAGAAGAATGAACTGGCACAGCCAACCTATCAG---AACATTTACCCCTGTATTCTTCTTTAGTTCTCTGTTAAAATAAACATGATGtttaaaaattaaaagaaaattta----tataaatataaCTAAGCAGTGTT---CTGTTAAAGTGTCTAGATGTGTTTAAGAGGTGATAATATCACTATCATTAACAATATTAAATACATACATTTCAGGAAAATGAGCTAGTACATGCATAGGTA--TTTGTTTACAA-------TTCACTAAATAATAAATA---------TGAAATCAGGAACTACATTTACTATAACTCCACTGACCCTCTGCATTGTGGGA--GCCCATGCAAGCCGTGAA------AACATTGCTGGGGAAACTGAAAGTT--TGGTT------AGGAAAGCCAACATTTTCATAGCAGAGCAAAATCACTGAAACCTTCTTCCACTCATAAGGG--AAGTTTA-ACATTTTAATGCATTACTTACTG-TTGTTACTCAGGTCTTCTGAGACTCTATCTGATCACGTTCA----GTATTACTGTCCTGCAGACACTGACTTCAACATGCAGGGTAAATGCAGCTAATAAGCATAATTAGCTCAGACAGTGTATTTAATTTAGTTTTGCGCTAAGGACTAATTGCCTACTCAGCGAAGGGGAAGTGTAACATGTTTTTTTAAAATGCTTACCCGAGGGCCCTGATCACCTTGATCTCCCTGCAAAGTGGAAAGATGAGATGATAGGTTTAA-CACAGCATCTGTGTGCTACCCAGCTCTCTTACATCATCTAACATTACACTGGGTCAATACAAACTGTGTCTTTAGTTCATGCTGCGACGTATTTCCATTCACCTGGGAAGTGCCACCCGTA--CATCAACTCACCTTCTCTCCTTTTGGACCAGGAGGGCCCTGAAAGAAAAAGAAAGGAAGAA ...x.:.::....::..-...::....::..:x.::.....:.xx-....:.:..........:...x...:-..x:......x:....xx..x..:---.:....:...x:...:..x.xx.x---------.......x::x..:-..x.xx:..:x.........x::.:x----..:xx::.xx:....::x..:..---.:x..x.xx..::..:.x:.x.x...:.:x.::x...x:x.x..--------.:...:.x::.x.:x:..xx..:::..xx:.xx.:xx.x.....:x.:..--...:.:.::..-------..:.:xx....::.x:..---------..x.::x.::::.:.x...:.x..x..x....:xx:x.....:::.....::.--:::.......::.-....------..:.x.xx:...:..:x..:xx.:.--..:..------..x:.xx.:::.x:..x.x:.::.x:x.x..-.:.:..x.:xx..-...:.:.:...:.x:--....xx.-.:.x.x:..::x.x...x.x.x:-.:....x......:..:.--------------....x.x..----....x::xx.::...x::.xx.x...xx.x....::.x::...x....:..xx....---------.x:.::.x.x.xx..x.x.x.::..x.x.:..:::.......x:.::.:..:x:x...x::..:::...-----------------......x...x..............x........:.:.:.:.....:......:.:..x....:-..x.::x.x.:::..x.:::..------...x.------..x..:.x.x..---:..:...:--------.x...x...:..::xx.:.x..:.:..:.x..:.------.:::x.:x...--...:xx..:.....x..x..........................:...:.:.:..:..:.. 17M1D27M1D26M1I24M3D24M9I14M1I26M4D23M3D44M8I50M2D11M7D18M9D53M2D13M1I4M6D25M2D5M6D31M1I13M1I15M2D7M1D23M1D18M14I9M4D57M9I69M17I64M1D22M6I5M6I12M3I8M8I34M6I11M2D61M 521/863 60.4% 954/94230402 0.0% 148/863 17.1% 53572896 NA +10480 chr4 + 190214555 108982580 108982579 108983241 662 AGAACCGTGTTTATTATAGTGTCAAACTCTGCTAAGCCAGGGAAGGGAATTATAGCTATAAACAGATTT-ATAGCTTCAGACTTTACACCTTTCAGTGTGTACTGAAGATTAAAAGAGACCAAGCAGAGGGGGTGGGTATAAACAGAAACTTTTAAAATATCAAAACCAGCCTCACTTACTAGAA-------------------------AACAAATTTTTATGGCTAT---------TATTTTCTGGGCATTTTCCACAGTAAGATCATAACTATA---AGGTTTTTTG-----------TGATGTCCATCTGAGCCCTGAACAAGGGACTATATG-------TGCCCATGA-TCAGTCTTAAATCAAAAGCAGCTGCCATAAGGAAGCAATTAGTGGGTCTAGCA--------CTAAAGAACATTTAGAAAAACCA------AACATTAAAAAAGGACTCTCAAAAGTAAGACTGATGTAGCTCAATGGAGTTAAAGGCTTATAAAACAGCAGGAATCAGGGACGCTCTCTCTGGTTTTCTTTTCTAACACAATACAAATTAAATACAGTCAAATTACCGCTCCTGCCAATCAAAACGAAGGGAACCCTTCTACCTAGCATCATTCCTTGCCTC-----ACATGTTTTAAGAAATTGCTAAAACTTCTTTGTTTAACTTTGATTT---------TTTTTTAACTTATTTTTAAGAG-GTCAAATAAAATGAACTCCATGGTGAAAG chr4 - 94230402 55409744 55409743 55410469 38819934 38819933 38820659 726 AGAACTACATTTATTGTTGTGTCAAAGC--ACTGAGGCAGGAAAGA-AGTTACAGCTATAAACAGGTTTTATTGTCACAGACTTGACATCTTTTATTTTGCACTGAGCATTAAAAGGGATAT----GAAGGGAGAAAAATATCTAGATCTGCTTAA--TCTTCCAATTATCCCCTTTTATTAGAATAGCAGTAACATGGTAAAACTACAGAAGAATTTTCTTTAGTCACCTGTGAGGATATTATCAGTAAGCAGTCAATAAGCAGATTGTACCAATATGGAGATACTTTGCTCTAAAAGTATGACATGCATCTG---CTTGTGCTGGGGACCAGATGCATCAGCTACTGATGACTAAGTC---AATCAAAACATTCTACTTTATGGCAGCTATTTATATGCTTCAAAAAAAAAATCAAAAGAAAACTTGGGAAAATAACAATAAGACAATAATAAAATGTACTGGAAAGGAAGACCAGTACATTTCTGTGGAATTTAGTGCTTATAAAACTGTAGGAATCACGGAAGTATATTCTGGCTTTCTTTCCCAACACAAAAGAAATTAAACAAAA-AAAACTATGCCTCCTGCCAATCAAACTCCTGAAAATCCTTTCTCCAGATAT------TTGAGTTAGAAAATATACCACAAAATATTTTTATACTTCCTCTGGTAGAATTTTATCCATAAGCCAGTTCTCTCATTTATTCCTAGAAGCATAGAAAAAAAGCAGCTCCTTGCAGAGAG .....::::......:.x........x:--:..:..x....:...:-.:...:............:...-..x.::x.......x...:....:.x.x..:.....:x........:..:xx----..:...:x:::x...xx:...xx:x:....--.x.:xx..::.x..:.x:...:.....-------------------------..x..x...:.x.:.::.:---------....x..x.x:x::xx..x.:.:xx....::..x.x...---..:.x:....-----------...::.x......---.:..x:.x:.....:.x...-------.:.:x....-.x....---........xxxx..:.:x..x..x...x...x:.:x.::.x:x.--------.x......x.:..:.:....:x.------:...x...x...:x::x..x:....x.....:::.::.x:..x:....:..x.:x...........x.:........x...x.:x:x:.....:.......:.:.......x.x........:.x.:-x...:..:xx...............x:xxx.::..:....::x..x:::..------...xx.:-----.:..:::x:..:.x...x:..x.x:.:..:..x.x:.x...x..::---------..:.:.x.:.....::..::..-:.x:..x....xx.:....x..xx..:.. 28M2D16M1D22M1I52M4D30M2D27M25I19M9I39M3I10M11I13M3D20M7I9M1I6M3D44M8I23M6I127M1D51M6D7M5I46M9I22M1I29M 408/640 63.8% 726/94230402 0.0% 108/640 16.9% 53572836 NA +3107 chr4 + 190214555 109000719 109000718 109000786 68 CTGGGCAACAGAGTGAGACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACTATACACATA chr4 - 94230402 50955046 50955045 50955113 43275290 43275289 43275357 68 CTAGAGAAGAGAATATTATCCTGACAGAAAAAGAAAAAAAGAAAAAAAAAGAAGAATCTGTTCAAACA ..:.:x..x...:.:xx.::...x..:.....:.......:............:..x..:.x..x.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 58045673 NA +3134 chr4 + 190214555 109000736 109000735 109000778 43 ACTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACTA chr4 - 94230402 67445853 67445852 67445895 26784508 26784507 26784550 43 ACTTTGCCAAAAAAAAAAGAAAGAAAAAAAAAGGTAAAAACTA ...:..:...........:...:.........:.x........ 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 41554883 NA +11815 chr4 + 190214555 109009926 109009925 109010420 495 AATTCAATATCTGTCTATAATGAATCAAAAGTAGCTAGTAGGATCACAGTCTAAATAATCAGAGTCTGCAGGGATTCACAACAACATTATTAGTACATGATTAATCAGTACATAATGCAAACCAGTTCATACTCGACTTTTATGTCATGCTGTCTTACATTACAGTCCTGTGGCACTGTTTCAGATCA--GTTAAGAGTTTTGCTTTATATGATAGTACATTGTTAAATCTGCCATCTGGCCCAACAGCTGATGTGGCTCACACAACCCTGAAGAGGCCCCAAGGGTTTACTCCTGGGAAATATTTGGTCTACTGTGTGGTGTTGTGATTATCAGTTCATAGCTTTTTTATATCTTTTGAAAGAATTGC---AGAAAGACCTCCACACTGGGAAAATCCTAAATTGAAAATAA-------TTTGC-------------------------TAGAAAAGA--ATTAC-CTTACCTGAGGACCAGGCTGTCCCTGAAATTAAAAAGAAA-----------AAGAAAAACAATTACAAA-ATTGTATCCT chr4 - 94230402 55420770 55420769 55421292 38809111 38809110 38809633 523 AATCCAAGGAGCATGTATAATTAATCACAA-CAGCTAGCAGCACAATATTTAAAATAACTGAGGCCTGCCTGGATT-ATAGCAATATTATTAGTATGTGATTAATAAGCAGTTGAAGGACTGCATTTGCTACACATTTGCTAAGTTATTTTATCTTGCTTTAAAGTTAGGTGGCAAAGTTTCAAGCCATAGTTAGGAGATTTGCTTTATTCAGTACCATGTTGTTAACCCTACCATCTGGTCAAACAGCTGAGGGAACTCAGACAACCGTATGGGAGGCCCCATGTTTCTCTCTGGGGAAGTATTTGTCTTACTGAATTATGCAATGGTTACCAGTTTCAAACTC--------------AACGCAGTACGATAAAAAAATCTCCACATC----AAAT--TATGTTGCAGATAAACTAAGTTTTGTGGGCTTCATTTAGCCTTAACTTATGTAGGAAATAAGATGGCACTTACTTGAGGACCAGGCTGACCCTGAAA--AATAAGAAAATCATAATGTTATGGAAAGCTATGACAAAGATTAGGTCCT ...:...x:xx::.x......x.....x..-:......:..x.:x.:.x.:x......:::::.:....xx.....-.:.:...:..........::........x..:.xx.:.x.x.xxx..x..xx...x.:x:.x:..x..:..x:.:....:.x...x...:xx......xx......:::..--....:...x..........x:::..x:.::.......x:..:........:.x.........x.x::....x......x.:x:.::.x...x.x.x..:x...:x.....:......x::.....x:.x:..:x:..:...:.....:xx.:..:--------------..x.x.x.:.---.:...:.:.......::----....--..x:...x.:....-------....:-------------------------...:...x.--..x:.-.....:..............x........--..x......-----------.x.:...:.x..x.....-...:x:.... 30M1D45M1D111M2I155M14D10M3I17M4D4M2D14M7I5M25I9M2I5M1I29M2D9M11I18M1I10M 323/471 68.6% 523/94230402 0.0% 76/471 16.1% 53589156 NA +3839 chr4 + 190214555 109019343 109019342 109019423 81 CACACATACACACACACACACACACACACACACATATATATATATATATATATATATTTATATGTGTATCCTATTAGTTCT chr4 - 94230402 66904846 66904845 66904926 27325477 27325476 27325557 81 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCT ..:.:..::..::.........:..............x..x:.x:.x:.:....:.x.:...:.::.x....x.:..:... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 42114497 NA +3037 chr4 + 190214555 109019351 109019350 109019401 51 CACACACACACACACACACACACACATATATATATATATATATATATATTT chr4 - 94230402 87372747 87372746 87372797 6857606 6857605 6857656 51 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT ..x...........x.........:x....::...:..::.......x.:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 21646604 NA +3313 chr4 + 190214555 109019353 109019352 109019401 49 CACACACACACACACACACACACATATATATATATATATATATATATTT chr4 - 94230402 87372747 87372746 87372795 6857608 6857607 6857656 49 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT ..x...........x..........x....::...:..::......... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 21646606 NA +9649 chr4 + 190214555 109034068 109034067 109034390 323 CTTGATAGTGCTATTCCATTCC---TTAACCACACAAATATTTAAATAACAAAAATGTAGTAGTATTGAAACCTGAAA------AACATCTTTACCTAAAAGTTCTCATTATTCTTAA-GAAACTGAAAGCTCTGCATACAGAAACAGAATGCACATT-CTCATTGATC---TTGAGTGTCACTCAAGAAACACATTTGATATGGTTTTTGCCTTGATAATGAGGACACAATAAACTATGAAAAATGTCATTTCTGGAAAATTTGTTGGCTATAGTTCAGCAAGAAATGAATCTTTTTAACAGATATGGCATGATGACTTTGATGAATTGAACTTTT chr4 - 94230402 55438855 55438854 55439183 38791220 38791219 38791548 329 CTTCATTATGCTACTGAATTCCAGCCTTGCTTAGCAGGTAATTGAACATTAGGAATAT----GCATACAGAACTGAAGTGTCCTACCAT--TTACCCAACAATTCTTGTTTCTCTCAAAGAAATAGAAACTCCTGTACCCACAGATAGAAAACACATGGCTAATTCATCAATGCCAGTGACATTGCATGAATATATTAGATGTGGTTAGTGCCATGTTGATGAGAAAACAATAAACT--GAAAAATACCACTTCCCAAAAATTAGCTGGCTGGCATTCAGGAGGAGATAGATTGTTTTAACAGCTGTGGCATGATGACTTTGATGAATTAGATTTTT ...x..x:.....:.xx.....---:.x:.:xx:..::..x..:..:.x:.::...:.----.:..xx.:.x.....:------.x...--.....:..x.:....::..x:...:..-....:x....x::...:.:x..x.:.:....x:.....x-..x...x...---x:x....x..:.xx.x:..:.:...x...:.....xx....x..x.:.....:.x..........--.......::..:...:x:......x.:.....:xx:.....x.:..:..::..:x.........x.:.......................::.:.... 22M3I33M4D16M6I5M2D27M1I39M1I10M3I65M2D98M 217/315 68.9% 329/94230402 0.0% 22/315 7.0% 53595213 NA +4919 chr4 + 190214555 109050110 109050109 109050236 127 CAGAGCAGCTGAAAGAG----AGACTTACCAGATTCTCCTCTTCGGCCTCTCTTACCTCGTTTCCCTGGAGGGCCTGAAATACAAAGGATAATTTTTTTAGTGTAGTTTAATTCTTTTTCCTGGTTCCAAA chr4 - 94230402 55462700 55462699 55462818 38767585 38767584 38767703 119 CAATGCAACTTAGGAAGGTGAAAACTTACCAGTCTCTCCTCTTCTGCCCCGCTTACCTCTTTTCCCTGGAGGACCTAAAA---AGAAGA---------TGGTGCATTTTAACATTTTTTCTTGAATTCAAA ..:x...:..x.:::..----.:.........x:..........x...:.x........x............:...:...---.:.:..---------.:...:.x.....:x:......:..:x.:.... 17M4I59M3D6M9D33M 87/115 75.7% 119/94230402 0.0% 16/115 13.9% 53587410 NA +4919 chr4 + 190214555 109050110 109050109 109050236 127 CAGAGCAGCTGAAAGAG----AGACTTACCAGATTCTCCTCTTCGGCCTCTCTTACCTCGTTTCCCTGGAGGGCCTGAAATACAAAGGATAATTTTTTTAGTGTAGTTTAATTCTTTTTCCTGGTTCCAAA chr4 - 94230402 55460234 55460233 55460352 38770051 38770050 38770169 119 CAATGCAACTTAGGAAGGTGAAAACTTACCAGTCTCTCCTCTTCTGCCCCGCTTACCTCTTTTCCCTGGAGGACCTAAAA---AGAAGA---------TGGTGCATTTTAACATTTTTTCTTGAATTCAAA ..:x...:..x.:::..----.:.........x:..........x...:.x........x............:...:...---.:.:..---------.:...:.x.....:x:......:..:x.:.... 17M4I59M3D6M9D33M 87/115 75.7% 119/94230402 0.0% 16/115 13.9% 53589876 NA +10418 chr4 + 190214555 109065782 109065781 109066089 308 TTTTGAGCCACAATTGACAAGACCTTCCT---TGTGATGACAGATTAAAGTATTCACTGTATGGCAAGGTTTTTTATTTCACT------------GCAGCAACCAATGATGAAATGCAATATGGTCAGATTAAAGGTAGCACATAACTACCCTTTTGTAGTAGTAATGC------CTTTGGTGAACCCACACATGCT-ATCGGTCATTTAAATCCATAACCTGGAGCTGAGCAGAGC---CCCATCAAAGTCTTCTTTACATGCCCCACCT--GCCCTGGGGTGGTGCATACATCATTTGAAGCAAAGCTTAGTGACAGCTGCAGAAATGTACTC chr4 - 94230402 55481624 55481623 55481956 38748447 38748446 38748779 333 TTTTAAGCCATGATTGACAAGACCTGCATGATTATGATGACAGATTAAAGTGTTCATTGAATTCAGAGGGTTTTTATTTCAGTTGTGACAGTGGTGCACTGGTAGACAATGAAATACAATACCACGGGATTAACAGCAGCACATAACTAGTCAG--GCACTGGTACTGCAATCATCTTTGTCTAACCCACACGTGCTGATCACCCATTTAAACATAAAACCCTACCCTGAGCAGAGCATATTCCTTTCGGCCTTACTCACGTGCCTCCTCTCATTTCTAATATAATAAATATATCATCTGACGAGGAGCTTAGTGACAGCTGCAGAAGTGTGTTC ....:.....::.............x.x.---.:.................:....:..x..xxx:...x...........x.------------...x::::x:.::.......:.....:x::x:......x:.:............x:.xx--.:.x.:...x...------.....x:x.........:....-...:x:........:x:.x....:x:xx...........---::.x.:xx:.:...x:.:..:....:.x:..--x::..::x:.::.:x...:.....:...x.x::.....................:...::.. 29M3I51M12I59M2D13M6I22M1I39M3I31M2I62M 213/306 69.6% 333/94230402 0.0% 29/306 9.5% 53584158 NA +3404 chr4 + 190214555 109066738 109066737 109066814 77 CTGCAGCCTCAAAATCCTGGGTTCAAGGGATCCTCCTGCCTCACTCTCCCATGTAGCTAGGACTACAGGTGCATGAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.....:x..:x.:...........x.x.:.x.xx.x....x:..::..x......:.:......x.....:x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 90869612 NA +9275 chr4 + 190214555 109068019 109068018 109068377 359 TTACACAATAACCAGAAGTCTACTGGGGTGCGTGCCATTGCTTTCGGTGGCTCCTCCAAGGCCAGCTGTGCATATCTTCAGTAGCTTGGAAGCTGGCCAGTGCAGTAA------------------GCACCATGCTGGACTTGGGAAACT-AATCTCCTGTATTATTGCTTTTTC-ACAGGTGGGACATCTGCCCTTTTCTTTTATCAAAGTCTTCCTAATGACATATTAAAGGCTCCCCAAACTCAACACAACATTGGATTATTACAGTTGAATGAAAAGATAA------------AAGCAAAAAAGAAACATGAGTAATGAGTAAGCAGGATATTTAGTCTAAGGACCTGG--TGCACATGCAACAGATTTACCATTTTTGACAGCCAGAC chr4 - 94230402 55482876 55482875 55483252 38747151 38747150 38747527 377 TTACAGAGCTTCCAGAAAGCTGCACAGGAGAATA--GATGCTCTCAGCTGCTTCTCTGTGACCAGCTGTAC----CTTCAGTAGCTTGGAAAGCATCCAATGCTGTAACTTTGTCAGCCAACTGTAACCCCATGTTGAACTTGAAGAACTTAATCCACTCTATTATTGCCTTTTCCACAGGTGGAACATGCACCCATTTCTTTTATCAAGGTCTTTCTCATGACATAATAGAGATTCCAAAAACCCAATGAATGTTCACATTATTTCAT--------ATAGATAGTTTTTTTTACCTGTGCAAAGAAAAAGGACTAGCA--GAAGAAATAGGAAACAAAGATCCACCTCTTGGAAAGCACATGGAGATGATCTATCATTTCAGGCTGCCAGAC .....x.::xx......:x..:.xx:..x.x:.:--:x....:..:.:x...:...::x.:........:.----................:x::x...:...x....------------------:.x.....:..:.....:::....-....:x..x.........:.....-........:....x::...x.............:.....:..x........x..:..::...xx....:...::x.xxx.::x......x..x--------.x.....:------------:x.....:..:..:x.:x..:.--..:x..::....x.:xx..x::x.xxx.:...--x.......x.:xx...:..:.....:x.:.x....... 34M2D35M4D33M18I24M1I24M1I93M8D8M12I22M2D32M2I38M 234/343 68.2% 377/94230402 0.0% 50/343 14.6% 53585143 NA +11259 chr4 + 190214555 109086873 109086872 109087230 358 CACAGCATTATCAAAATACCGCAAATAAGTTCATTGATAGGACTGCTGACATGGAGTGCTGTCTCTTTCCAAAGTGGCCCAGTGGAAGTTGAGGGAGACAAGAAAAGGGTCAACAGACAGTGAACAATGGGACACTTGCTGTCACCTA--GTCTGTGTGGGATCCCTCCTACTCAG---------------------AATGCAAGTATGAGTACAAAGGGATGAATACGGACCTGCCTATCAACCACCCAGTGTGTGGGCAAAATGACAAAATGTTCCAAGAAGATAGGAGAGAAGCAACATTCAAGTAATCCAAGAGCCATGGCTGGACCCCAGCC-CTCAACAATGTGACTGTTAGC-ATCCATGCTGT-GGCATTACTGTT chr4 - 94230402 55492430 55492429 55492788 38737615 38737614 38737973 359 CAGGGCATTATCTGAGTGCCACAAATGGATTCAATAACAGGTCCAGAGGCACAGTATGTTG---CTTTGTAATGGGCCGCAGGGG---TTAAG----ACAAGAAAAGGGTTATCAGACAGTGAGTAATGGAACACCTGCTGTCACCTATAGTCTGTTTTGAATCCTTGCTATACAGTTTCATCACTGACAGCACCGGAGTGTAAGTAATGCTGCA---GGCCAAACAGGGACCTGTCTGTCAGCCTCCTGGTGT-TGG--------ACAAAATGTCCTGAGAAGCTGATGTAGTGGCAACATTCAAGAAATGCAAGAACCATGGTTGGATCCCAGCTACTCAGCAATGGCA---TTAGCGATTCACGCTGTGGGTATTATTCTT ..x:........x:.:.:..:.....:::....x.:.:...x.::xx.:..::.x:..:..---....x:..x.x.x.x...x..---..:..----.............:.x..........::.....:....:............--......x.x.:....:.x...:x...---------------------.:..:.....xx:x.:..---..x::..:.x.......:..:...:..x..::....-...--------.........:.::.....x.::x:x..x:............x...x.....:......:....:......:-....:.....xx.---.....-..:..:.....-..:....:.x.. 61M3D21M3D5M4D51M2I26M21I18M3D36M1D3M8D71M1I13M3D5M1I11M1I12M 245/333 73.6% 359/94230402 0.0% 51/333 15.3% 53594443 NA +9002 chr4 + 190214555 109090131 109090130 109090753 623 TATTTCAGAATAAAGTTATTTCTTAAACAAAATTACTTTTTCTCTAGACAGAATTTAAGTTTAAAGTAGTACATTTGACCTATAAAAACCA---------CACGGAA---CTGATAG---TTTTACATAATTCC--TACTTTAGCAAACCTTTGCTAATTTATTCATGAATGTTTAATCTGAATTTTTGTCCCTT--ATGATTTCCTTGTTAGTAGGTTTTCTTTATTTTTCTTCTACCTTTTGCCTTCACATAAAAATTTTTTCACTTTGGTAAATGACTTTTCATCTTAATTAA-ACATAGAGGAGAGTATCTGTCATCAGTCATTCTATTGCATTTATCAAAAAGTCAAGA-----GGCTGTTAGGAAACTATGAAAGTGCTTTCAGAATTTAAAATTAAAATATACAGTTTTAGAACTTACAGCAACTAGAACTAAACATACTGCTTGCAAGTGCTGAAATGTAGTTATGTTATGTC-----TAAATGTCTTATTAAAGACAATATACTTGTAAATGAGTGCTATTTTTTAAAAAAGCAAAAACCTTCTTTACTAC-TTAGTTTCACCCACTTCCTTCTTGGTCAGAATGCCAACTGGAATATTATCAGTTTAAAATTCCATTTGAAAGTTTATTTTCTGAATTAACATC chr4 - 94230402 55495090 55495089 55495717 38734686 38734685 38735313 628 TATTTAAATGCAATGATTTCTCTTAAACAAGGAAGTCTTTTTGC--------ATTT--GTATAAAGCA-TGCATT----CTAGAAAGACGAGGAAAGAGACACAGGAGTGCTGACAAGCTTTTTCCAAGGTTTAGGCATTTGATAAAGCATTTGATAATTTATTCATGAATGTTTAATCTGAGGCTTTAATCTTCAAAGAGCTTCCTAACCAACACATTCATTTTATTTTCCTTACATATTCTGCCTTCACGTAA-----TTATAGTTTTGCAAAGTGATTTTCAGTATTGATTAGCCCAGCAAGGATCACATCCATCATCTGAAGCCTAACTATGCTTATCACAAATTTGTGAAAACCAGTGGGCAAAAAAATCCACTCATGTTTACTTAAGCT-AAATTAAAAGGTACATTTCTGGCACATGAGGCAACC--ACTCAGATGTAGACCTTTCAAGTACTGAAATGTAAACAAGCGCTTTCCTTCTCTAGTTTGCTGCAAGTGTTACTGCAATGGTAATTTATTCCTAAGTGTTATGAAG--AAATACTTTCCTTGCCACTTTCATTTCAAATACCAACACTTCACTTTGAATGTCCAGAAGAATA-TACTAGATTGAAATTACACTTGAAAGCTTATTTTCTCTACCAACATC .....x.:x::..x.x.x.:..........::xx:::....:x.--------....--..x.....:.-.:....----...x...:..x.---------...:.:.---....:.:---....x..x::..:x--:.:..x.xx..:.x....x...........................:x:...:x:.:.:--.x:::.....x:::.::.x:..:x:........:...x:.:x..:.........:...-----..x.x::....xx..:...:...:x:.x..:....:-x..xx:....xx::...::.....x.xx::::x.:.::::......x...x.::x..-----:.:x.x:.::...x.x::xxx:..:..x.xx..x:.-.........x:....x..:.:.x..x.:x:.....:--.x::.:.::..xxx...x.....:..........:x:.x.:xx.x..-----:x.:.x.x:.::x.:x.x:.x.::.x.x....x.x.x.x...xx.x...x:..:--...x..:...:..:.:..-..x:.....xx:..:xx.x::.::x.:x.....:.x.xx:.....-..::..x..:.....x..:.......:.........xx.::...... 44M8D4M2D10M1D6M4D12M9I7M3I7M3I14M2I59M2I58M5D36M1I57M5I36M1D36M2D47M5I54M2D18M1I45M1D47M 367/597 61.5% 628/94230402 0.0% 57/597 9.5% 53595041 NA +9920 chr4 + 190214555 109101585 109101584 109101929 345 AGCTAATCCAATCCTCCTGCTTTCCCATAATAT-TCACCA-ATTCCTTTTCTCCAGAAACAAGTCTAGGTGTCTCTTGAACTCATCTATT------GCTTT---------TCCCAGTAATTTATTCCATATGTTTATTATCTCTTTCATGAAATGCTCTCCACTCAGCATGGAAGTAGACAAAGCACACTCGTCAGGCTGACATCTGGCTGTCTCTTTCAGAAAGCAAAGACCCTTTCAATGCTTCTCTTGGGCCCCCCTTTCACACATCCTGAACTTACTGAGCTACAGATGAAATGTTCTTCCCTGTCCCCCATGA-AAACTCACAACCAAGAGTTTAATGAACCCCATTCCATAAATAAA chr4 - 94230402 55511881 55511880 55512218 38718185 38718184 38718522 338 AGTTAATCCAGCCATCCTGTTTTCTCACAACACCTCTCCACAGCACCTCTCTCCATAAAGAAATCTAGGTGTCTCTCGAATTCATTTATGTTTCAAGCTTTAAAATAGCTTCCCCATAACTTATTCCTTATGTTTATTAAC-ATTTCATGAAGCACTCCATAATATACACAGAAATGGACGAAAGTTTCCCATCAACTTGACATCTGGTTGTCTCCT------------------------GCTCCTCCTGTGCCTTTCCTGTAAGCACACTAAGCTGACTGAGCTACTGATGGAGTTTTCTTTTCCCTCTCCAGTGAGAAAATCTTAATTAGCAGCTCTCTGTGTTTCACCTTATTaaaaaa ..:.......::.x.....:....:..:..:.:-..x...-.x:x.:.:......x...x..:.............:...:....:...x------.....---------....x:...:.......x...........x.-x.........:::...:x:.x.xx:..::...:.:...:..:xx:x.:.:...:x:..........:......:.------------------------...:...:..x...:::.:.x:.x:..:x..:.:..x..........x....:.:.x.....::.:x..:..x:...-...x..x:..::.:x..:.:xx..x::::..::::..x..x... 33M1I6M1I49M6I5M9I31M1D75M24D77M1I44M 216/320 67.5% 338/94230402 0.0% 43/320 13.4% 53589704 NA +10026 chr4 + 190214555 109101585 109101584 109101909 325 AGCTAATCCAATCCTCCTGCTTTCCCATAATAT-TCACCA-ATTCCTTTTCTCCAGAAACAAGTCTAGGTGTCTCTTGAACTCATCTATT------GCTTT---------TCCCAGTAATTTATTCCATATGTTTATTATCTCTTTCATGAAATGCTCTCCACTCAGCATGGAAGTAGACAAAGCACACTCGTCAGGCTGACATCTGGCTGTCTCTTTCAGAAAGCAAAGACCCTTTCAATGCTTCTCTTGGGCCCCCCTTTCACACATCCTGAACTTACTGAGCTACAGATGAAATGTTCTTCCCTGTCCCCCATGA-AAACTCACAACCAAGAGTTTAATG chr4 - 94230402 55507607 55507606 55507924 38722479 38722478 38722796 318 AGTTAATCCAGCCATCCTGTTTTCTCACAACACCTCTCCACAGCACCTCTCTCCATAAAGAAATCTAGGTGTCTCTCGAATTCATTTATGTTTCAAGCTTTAAAATAGCTTCCCCATAACTTATTCCTTATGTTTATTAAC-ATTTCATGAAGCACTCCATAATATACACAGAAATGGACGAAAGTTTCCCATCAACTTGACATCTGGTTGTCTCCT------------------------GCTCCTCCTGTGCCTTTCCTGTAAGCACACTAAGCTGACTGAGCTACTGATGGAGTTTTCTTTTCCGCCTCCAGTGAGAAAATCTTAACTAGCAGCTCTGTG ..:.......::.x.....:....:..:..:.:-..x...-.x:x.:.:......x...x..:.............:...:....:...x------.....---------....x:...:.......x...........x.-x.........:::...:x:.x.xx:..::...:.:...:..:xx:x.:.:...:x:..........:......:.------------------------...:...:..x...:::.:.x:.x:..:x..:.:..x..........x....:.:.x.....::.:.:.:..x:...-...x..x:...:.:x..:.:x:.. 33M1I6M1I49M6I5M9I31M1D75M24D77M1I24M 208/300 69.3% 318/94230402 0.0% 43/300 14.3% 53593978 NA +7946 chr4 + 190214555 109113156 109113155 109113391 236 TGATGTATTTCCCTGATCTCTTTGGG----AAAAAAATGTCTCTCAACAGCACAGGAAGAAAACTGGTTCTTTAACCCCCTGATGACAGAAACAAATTGTTTTGCAGCTCTGGGAAGAGATTTGTCACCAATGTGCAAACCAGACCCTGTATCCTGGACATTGTGCAGAGCTGCAATATCACATTTTTAGGGAATTCCAAAGTGATCCTC--TAATAACACAAGAG------AATTTTTAACACAAAG chr4 - 94230402 55518560 55518559 55518807 38711596 38711595 38711843 248 TAAAGTATTTCCCTGAGCAGCAAAGGCAGAAATAAAGGTTCTCTTAACAGAACAGGAAGACAATTGCTTCTTTCACCCCCTGACAGCAGAAGCAAATTGTTTTGTAGCTACTGAGAGAGATTCAGCATGAATGTGCAAAACAGATCTTTTCACTTTGATAATATACAGAGTTGCTGCACTGGGATTTCAGTGATCACAATTTTTATTCTCCATAGTGACACAAAGGCTATTTATTTTATAAAAAAAAG .:.x............x.xx:xx:..----..x...:xx.....:.....x.........x..:..x......x.........:::.....:............:....x:x.::.......::x..:x..........x....:.:.x.xx.:.x..:.x.:.:.....:...x::.:::x:x...:..x..x:x.x.xxx.x..:...--..:.:......::.------.x...x...x.x.... 26M4I180M2I14M6I16M 161/236 68.2% 248/94230402 0.0% 12/236 5.1% 53594596 NA +3183 chr4 + 190214555 109130888 109130887 109130959 72 TTATAATTCATATACCAAAACAGAAAATTTAAAGGAATGATAGAAAGAAGAAATGAAAAATAATTTTAAATA chr4 - 94230402 25870766 25870765 25870837 68359566 68359565 68359637 72 TTATAAAGCGTGTACAAAAGTAGAAATTTTAAAAGGATGATGTAAAAGTGAAGCAAAGAGTAATTACAAACA ......xx.:.:...x...::.....x......:.:.....:x...::x...:::..:.:.....x:...:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 83260122 NA +3025 chr4 + 190214555 109138673 109138672 109138715 43 TGTTGTTTTTTGTTTTTGTTTTTGTTTTTTGTTTTTTGTTTTT chr4 - 94230402 66916763 66916762 66916805 27313598 27313597 27313640 43 TGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTT ..x.x.........x.....x.......:.............. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 42221910 NA +31922 chr4 + 190214555 109146261 109146260 109146814 554 AACACCCCTCATAATTACTATTTAATAAGAAAAGTCTATTTACATCTTATTTGCAATTTCCACTTCACTTAGATGGTTCAGAATCATAAAAGC-ATCC-TGGAGAAAGATTTAAAAATCATTATATGACAAT----GTTTAATAGAAAGTGATGGCTTAAATGTTACAATATGTTTCTTGAATATCTTCACATTAAATAGTAATTGAACAAAAAGCCCCCTGGTTCTGCTTAAGGGCAAGTCCCACAAAGCTCTTCATTATTGGAATTTCCAACTTGGAAGCCAAACTAAATAATAAGGAGTAATTTGCCAATTAGAACTTCCTGCTC-TTTTCTCTTTATTCTTTAAACACCATTCAGGGGCTGAAATGGTCAAACACTTTTAGCTTCAAAACAGCAACTGAAAGGATTTAATTTGTGTCTCTCCAAGGTGAACCTGTCAAGAGGCAGTGGTGATGCATTCCATGTCCCCCAGCAGCAATTTCCCTTAAAGAGAAGTGTGTTTCCACTCTTGCAGAATATGAA----GTTTCCTTTC-------CTCATTTCCCATTATTTATTTCAATTA chr4 - 94230402 55544762 55544761 55545324 38685079 38685078 38685641 563 AGCCCCTCTGCTAAATATTACTTTGTCAGAAAATCCT-TTTAGCCCTTGTTTGCATCCTACACTTTACTTAGACATCTTGAAATCACAAAAGCCATCCACAAAGAGAGATTTAAAAATCATTACCTTAGAATACTTGTTTAATAGAAAGTGATGGCTTAAATGCTACAATATGTTCCTTGAATATCTTCACATTAAATGGTAATTGAACAAAAAGCTGCCTGGCCCTCTTCAAGGGCAAGTCCCACAAAGCTCCTCATTATCGTAATTTCCAATTTGGAAGCCAAACTAAATAACACGAAGTAATTTGCCAATTAGAACTTCCTGCTCTTTTTCTCTTTATTCCTTAAACACCATTCAGGGGCTGAAGTAGTCAAACACTTTTAGCTTCAAAACCGCAACTGAAAGAATTTAATTTGTGTCTCTCCATGGTGAACCTGTCAAGAGCTAGCAGTGATGCATACCATGTCCCGATACAACAGTTGCTCTTAAAGA----TGGAGTTCCCCATGT----AATACCAAGGGTGTTTTTTTTCCCCCCCACTCATTCCCTTTATTTTGCTTCCATTA .:.x..:..xx...x..:..:..x:.x......x:..-....xx:...:......x::.x.....:.......::x:.:::.....:......-....-:::...:.................:x.x.x...----...........................:...........:......................:.................:x.....::..x:.:......................:.......:.x.........:....................:.x.:.............................-..............:.......................:.:........................x...........:....................x.................x:..::.........x.........xxx:..:..:..x.:........----..x:x....x.x:x.----....:x..----....::....-------......:..:x.xx...::...x.... 37M1D55M1I4M1I33M4I192M1I164M4D15M4D8M4I10M7I27M 452/545 82.9% 563/94230402 0.0% 27/545 5.0% 53601499 NA +3420 chr4 + 190214555 109149910 109149909 109149965 56 GTAGTTTTTTGGAAATAATTTTATGTGTATGTATGTGTGTGTGTGTGTGTACCTGT chr4 - 94230402 26564516 26564515 26564571 67665832 67665831 67665887 56 GTAGTTTTTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ...........:..x...x..x..x.:...:...............:....:x.:. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 82585394 NA +11320 chr4 + 190214555 109156039 109156038 109156327 289 GTCTCAAGAGGCAGAACTGAGCTGATGCTGTCAACTGCCGGTGCTGTAGCTCCAACTGCAGGAGCTCTAATTTGACCTCCTGAGAAAGAATCCCAATTAGAACCACATAAAGGAAGCCATTTAGACATGGTGCTTTGG--GACAAGTCTGACCCAGTGTGTCAATGTCAACTGAAACAAAAAACTAAAGGAACTTTCTCAAGCACGTTGTCTTTTCTAGATAAAAGCTAAAGACCTTTTAGACCCAGGTTTTGAAGCAGGCTTCCCTGGACTAAAATGAGAACAACTCAAA chr4 - 94230402 55553316 55553315 55553602 38676801 38676800 38677087 287 GCCTAAAGAGGCAGAAGTGAGCTGCTCCTGCCAGTTGTCACTGCCAAGGCTC--AGTGAGAAAGCTCTAATTTGACCCTTTTGAAAAATATGC-AATTAGAGACCCATAAAAGGAAGTATTTAGACACAACTGTTTAGCAGACTGGACAG-CCTAGTATGTAGGTGTCAAGTGAAACAAAAACATAAAGGAGCTTTCTGAAGAGCTTTGTTTGTTCCAGATAAAAGCAAAAACCTTTGAAGATCCAGCTTTTGAAGTAGTCTTCATAGGACTAAAATATGGACAGTGTAAA .:..x...........x.......x.x...:..::..:.:x...::x:....--.x..x:::...............:::.x::...:x..x.-.......:x.x......:.:.:x:.........::::xx...:.--...x:.x.x.-..:...:...x::......x...........xx.......:......x...x:.x....:.x...:..........x...:x.:..xx...:....x........:..x....x:x..........:x.:...::x:... 52M2D39M1D44M2I10M1D140M 201/285 70.5% 287/94230402 0.0% 6/285 2.1% 53602723 NA +10210 chr4 + 190214555 109157801 109157800 109158110 310 GAGCAGTCGCTGAAACGAGACTCTAGGCTATTGGCACCTAGCACGTGTCCATACAGCCGCTGCTGCAGAGCACAGCAT----GGGGCACTGTGCCATTCCCGGCGCTAAAGCACATGCAGGATCAAAGGCACGGGCATAACTGGCATGCCACCATCTACAGCTCTAGATGTGGAGCCAGCACTAAAGCCTGTGAATACTTCTATATAAAATTACATGGATGTTGACAAACCACCTGTTGAACTAAAGAAAAAAAA-GTAA-ATTGTGCCCCTATAAGACCACTTTTCCCTGTATATTCCTGTAAAAAATTTTCTTT chr4 - 94230402 55556539 55556538 55556832 38673571 38673570 38673864 294 GAGCAGTCATTGACACAAGAAAGTATTGAGCTGGCACCAGGCACACAACCACAGAGCCAACACTGACATACACCGAGTTTAAATAGTGCCATACCATTCCCAACACTGTAGCGC---CAGTATCAAAGGCATGGACGTGATTGAAATGCCACAGTCTATGTCTCTA------------------AAGCTTTTGAATACCTCTATATAAAATTACAGTTATGTTGACAAGCCACCTGTTAGGCTGAAGAAAAACAGTGTAACATTGTGCCCTTGTGAGGCCACCTTTTACTGCATG-TCCTGGCCATATTTTTCTTT ........::...x..:...xxx..xxxx::.......x:....:::x...:.x....:x::...xx:x:...x.x:.----:x:.::.::.:........::.:..:x...:.---...x..........:..:.:.:.:..:x.......x:....::x.....------------------....:.x.......:................xxx..........:.........:::..:........x.:-....-.........:.:.:..:....:...:x...:..:-.....xxx.x.x........ 78M4I32M3D49M18D71M1I4M1I34M1D20M 201/288 69.8% 294/94230402 0.0% 28/288 9.7% 53601262 NA +5450 chr4 + 190214555 109170130 109170129 109170302 173 AATTTTCCATAGGAAAAATGCAAGCAAGGAGAAAATTAAAC-AGTATTCTATGTTTAT-TTTTCTGATATTTTATTTACTAAGGAGAAGAGA---------TAATTCCCTAATAGGGAAGATGAAAATTACTGATAAAATTTTATTTATATGCTAAAAAAGTATAATTCTTGAAATAGGAAATC chr4 - 94230402 55566598 55566597 55566779 38663624 38663623 38663805 182 AATTTTCCAGAGAAAGAATGCAAG-GAGGAGGAAATTAAACAAGCATTCT-TGCATATATTTCCTGATGTTATTTTCATTATGGAGAAGCAAAATTGCATTTACTCCCTTGACAGCAAAGGTCAAACAATCTGATAAAACCTAGTTAATGCACTGAGAATGATTAATGCTTAAATGAAAAAGTC .........x..:..:........-:.....:.........-..:.....-..:x...-...:.....:..x.x..:.:..x.......x:.---------..x.:..:.:.:..x:...:.x...xxxx.........::.x:..x..:::..:.:..x.xx....x...:..xx.::..:.. 24M1D16M1I8M1D7M1I33M9I83M 121/171 70.8% 182/94230402 0.0% 13/171 7.6% 53603532 NA +15355 chr4 + 190214555 109177450 109177449 109177892 443 AAGCGAGCTACAAAACTTTTATTCTGACAGGTCTCCTCCTTGAACCAGCCCCCACCCCAGACCCTATTCCTTCATTTTGATGC--TGAACTTTTAGACCAAATACAGTGGGCACCATCTGCTATCAATACAGCCTATACTCTTCCCAGCCAAGATGAGTTCCAGGCCAAGTTTATCTTGTGAGTTAACAGGAGGTGACAAGCCTGGCAGGACACAAATTCTCCCTGCATGATTGATGCAGCCTGGCTGACCAGCTCCATGCTAATGAGGATGTGCCAGGACTCCCAACAAAAACATTTTTGAATAATTTAAAACG--AAAGCATAAATTGCCAGGTAATGTGATTCATTGTGTAAGTATAGC-TCCAGTTAAATTTGCGTTTAGGGGTGCCTCTATAGCAAACATCAGTTGACTGCAAACTGCCTGTTAGCAAAATTAACCATATAAA chr4 - 94230402 55569555 55569554 55569974 38660429 38660428 38660848 420 AAACAAGTAACAAAACTTGTTTTCCAAC----------------CACATCCTCACTCCTCAACCTACTCTATCAATGTGTAGCCGTGGATATTCAGGGTTACTGGAAT----ACCATCTAGTATCAATATTGCCCCCACATTCCCCAGTCACAGCGTATTAGAGGCCAGGTTTTTCCTCTGAGTTAACAAGAAGTGACAAGCCTGGTAGTTTGCAAATTTTCCCTGCATGACTGATTAAGTCTGAATGAACAGATCCATGCTAATGAGAATGTGCCAG--CTCACAATAAAAACATTTTTGAATAATACAAAACTTCAGAGCTTAGTGTGCCAGATAATATAATTCATTGTTTAATTATGGCACCCAGAAGAATCCACTTTTA--CATGCATCTACAACAAATATTGG-TGACTGCAAA---ACTGTCATCAGAATTAATGTAATAAA ..:.:..:x.........x.x...::..----------------.xx::..:...:..xx.x....:..:x...x.x..xx..--..:.:x..:..:x:x.x.:x.:.----.......:x........:x...:x:..x:.:.....:..x:::.x:..xx......:....x..:.x..........:..:.............:..xx::......:...........:....xx..:...:x...x...x..............:.........--...x...:...................x:.....x--.:...x..:xx......:....:.:.........x...x...:..-:....xx:...:::.x....--x:...x....:.:....:..::.-..........---x....:.x..:......:xxx..... 28M16D39M2I23M4D166M2D35M2I45M1I20M2D23M1D10M3D26M 299/415 72.0% 420/94230402 0.0% 33/415 8.0% 53607895 NA +11895 chr4 + 190214555 109179157 109179156 109179489 333 GAGCTTCAAGGTGACGGTCACCACCTGTGTTCCACTCTATTAAATC--------------AACATCTCTGAGATGCCTCCAAGCTGGCAAGAGAAGCACATCCACTATTGAGTCCCAGCCTTCCTT----GCAACCTGCCTTAACTGTCCTCACCTCCCCCCACTGCACCTGACACAACAGCTGTTTGGGCAGCTCCCACCAGAGCTGCTGATTTCAAAGCCCTGTACCGTTCAACTATGCATGTCCATCCCA-TCCTGTTACACCATGGTCATCTGAGACTTCTAATATGCATTCGTGATCCTAAACACTTGCTCCTCATTCAATTTTTTTGGATTTCAGAAACCAAACCC chr4 - 94230402 55571351 55571350 55571679 38658724 38658723 38659052 329 GACCACCAAGGCAAGAGTCACCATCTGT-----ACCCTGACAGCTCCTTGGGCTGGGCCAGATGACTTTAGAATTTCTCCAAACTGGCAAGAAAA--ACATCCTGCCCCACATCACAGCCTGCCTTTCACGCAACCTGCCATGACTGTCC----------CAGCTGCACCTGACACAACAACTGCTTGGACAGCACCAGCAAGCGCTGCTCATTTCAAAGCCCTGTACGGTTAAAGTATGCATGCTGGTCTCAGTTTGGTTATACTGCAGTCACCCGAGACCTCTGATATGTTGTCACGATCCCAAACATTTGCTC------CAACTCCTTCTGACTTCAGAAATTGAATTC ..x.x:.....::.x:.......:....-----..:..:x:.:x..--------------:.::x..:.:::..x:......:.........:..--......xx:x:::x:..x......x....----..........x.:.......----------.x:.................:...:....:....x..x:.x..x......x.................x...x..x........::x:..:..-.::x....:..::::....:.:.....:...:.....:xx..::.....:.....:......------...:.::..:x..:........:::..::. 28M5D13M14I35M2D29M4I20M10D93M1I62M6D30M 222/310 71.6% 329/94230402 0.0% 42/310 13.5% 53607806 NA +15083 chr4 + 190214555 109195580 109195579 109195932 353 GAACCAAGTTGAACATGAGTCAACTTCTCATTACTAGACTCAC----CGAAGTAAAGTC-CACAACTCAGCCCTAAGACCTTACTAAAATGTACTCTTTCCCAGAC--TGTCATATTGAACAGATCATGACATACAGAAGCCAAGGAAAACAAA----ATTCATGTTTTACTGGGTCCCACATGCTGTGATATTTTCAAACCCACATGCATCCACCAAGAAGCAGTCA----AAATGTTTGATTCTGGAAACAAATCCATAACAAGAATAGAGTACAGAACAAAAATCAACTCAACAAGTCAA-CCCATATGTTTTTCATTTTCCTGTATTCTATGATGGAATTGAATGTGGTA---AGTATACTTGGCTCC chr4 - 94230402 55574843 55574842 55575213 38655190 38655189 38655560 371 GAACACAGCTGAACAACAGTCTGCCTCCTACTGCCAGACCTCCTATGCAACACTAAGTCTCAAGTATAAATTCTGAGACCTAACCAAAATTTACAGTTTTCCATACCCTATCATCTTGAACGCATCATGACGCACAGAAGCCAAGGAAAACAAATGAAATTCATGTTTTACTTGGTCCCACATGCTGTGATATTTTCAAGACCACTAGCATCCACCAAGACACATGCAGGATGGATGCTCAGTTCAGAAAACAAAGTAATTACTAGGACAGAGCACAGAAC-AAAATCAACTCAACAAGCTACTTCCACGTGTTTTTCATTTAACTGTACTCTGCAGAGGAAGTGCATTTGGTATACAACATACTTGGCTTC ....xx..:......xx....x:.:..::.:.:.:....::x.----.:.x::x.....-..x:xx.x.:::..:......x..:.....x...xx...:...x..--.:....x......:x........::.....................----..............x..........................:x....xx.............x:..xx..----::...:.:::...x.:.......x:x..x..x..:.:....:.......-.................::.x-:...::............xx.....:...::::x....x..x..x.....---.::..........:. 43M4I12M1I46M2I46M4I70M4I49M1D21M1I50M3I15M 264/352 75.0% 371/94230402 0.0% 20/352 5.7% 53620737 NA +3020 chr4 + 190214555 109197330 109197329 109197378 49 ATATATATATATTATATATATATTATATATAAAAATATATAATATATAT chr4 - 94230402 65703309 65703308 65703357 28527046 28527045 28527094 49 ATCTATATAGATTATATATATATCATATGTAATGATATATAACATCCAT ..x......x.............:....:...x:........:..x:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 43494021 NA +14512 chr4 + 190214555 109207052 109207051 109207431 380 ATCTGACTCATAAATCACAGT---------CCTTACCCTAATATCCAACACTTTAATGACTCTGGCTAACTTCCTATTTACCTTGTGCTGGGGTTAACTAACAGACTTCTTTGCTTTTAGGGGAAGAGCCAAATGTTTCTGCACACCCCATGCTGTTTTAGGAAGCTGCCAAACAAAGAAAT----AAGGAGTGTGCCAGCTGCCTCTGTACCTCACTGTGTGTATATGTGATACAGCTGAGTCAAAGCATCCCATATCAGATCATCAATTAGCTGTGGGTGATGTGGAGGCGGGGGAG---CTTTAACATCTTGGCA-GTCTTCCTGGAGCATAGTTACAGTGATGTAAGGTAATATCAGAGCTGGAGTGATTTGCAAGAGGATCACT-GAGGTCTT chr4 - 94230402 55582033 55582032 55582418 38647985 38647984 38648370 386 ATTCAATCCATAAATTATTGTGTGTTTTATCCTTAATCTGATATACGACACCAAAGCAACTCTGGCTAACATCCTGTTTACCCTCACACTGGGCTAAGTGAAAGACTGCATTACTTTTGGGTGGAGTGCCAAGTGTTCCAGTATGCGCCATGCTGATTTCGGAAGCTGCCAAACATTGAAATTAGAAATGAGCATGCCAGCTGCCCCTGTACCTCATTTTCTGTATATATGATACTACCAAGCCAAGGCAGCCCATATCTGATAATCAATTAGC---------TGAAGAGGTGGGGGAGGGCCTTAAAAATGTTGGCACAGCTT--TAAAGTATGGCTGTAGAGATGTAA-ATAATATCAGTAACTGCATGAATAGCAGAAGGGACATTCAAGGTCTT ..:::.::.......:.:x..---------.....x:..:....x.:....:xx.:::............x....:......:.xxxx:x...:...x.:.x.....x.x..:.....:..x.:..x.....:....:.x.:.::.x........x...x...............xx.....----..x...::...........:..........:.x.x.......:......x:.::..:...:...x........x...x..........---------..x:....:.......---...x..x..x......-:x...--.::..:..:.:.::..x.......-:.........x:x:x.x:...x.x...::...:x..:.-:....... 21M9I152M4I88M9D16M3I16M1I5M2D24M1D38M1I8M 269/368 73.1% 386/94230402 0.0% 30/368 8.2% 53625019 NA +3506 chr4 + 190214555 109211168 109211167 109211335 168 TAAAATAAAAGTTGAAAAGAAAAAAGAAAATATTTTTAAATACATATATATATATTGTGTGTGTGTATGTATATATATGAAACAATATATATGTATATATATGAAACTATATATATATGAAACTATATATATATATATATATATATATATATATATATATATGAAACA chr4 - 94230402 21704648 21704647 21704790 72525613 72525612 72525755 143 TATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACAC-----------------GTGTATAAAATGTAATAGATGTGAATGACTGGCACCAA--------GAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAATCA ..x.:.....x..x.xx......xxxx.x....x.x..x.:...:.:.:.:.:.:-----------------:.:...:...::xx...x....:x..:xx..:x..:.x--------......x....:..:x.....x.x..........:.....:......x.. 55M17D38M8D50M 96/143 67.1% 143/94230402 0.0% 25/143 17.5% 87506520 NA +3506 chr4 + 190214555 109211168 109211167 109211335 168 TAAAATAAAAGTTGAAAAGAAAAAAGAAAATATTTTTAAATACATATATATATATTGTGTGTGTGTATGTATATATATGAAACAATATATATGTATATATATGAAACTATATATATATGAAACTATATATATATATATATATATATATATATATATATATATGAAACA chr4 - 94230402 21701075 21701074 21701217 72529186 72529185 72529328 143 TATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACAC-----------------GTGTATAAAATGTAATAGATGTGAATGACTGGCACCAA--------GAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAATCA ..x.:.....x..x.xx......xxxx.x....x.x..x.:...:.:.:.:.:.:-----------------:.:...:...::xx...x....:x..:xx..:x..:.x--------......x....:..:x.....x.x..........:.....:......x.. 55M17D38M8D50M 96/143 67.1% 143/94230402 0.0% 25/143 17.5% 87510093 NA +3080 chr4 + 190214555 109218344 109218343 109218412 69 CTGGTTTTTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTGAACTACACTTACTCTCCATGGCA chr4 - 94230402 58431204 58431203 58431272 35799131 35799130 35799199 69 CTGTTTTTTTGGGGGTTTTTTTTTGTTTTTTTTTTTTTAGGTTGTAATGAGTTTTAACTTTTCACAGCA ...x..........x.........x.............x.x..x.:.xxx::x:.x...:.:..::... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 50787140 NA +12865 chr4 + 190214555 109220107 109220106 109220486 380 TCAATTGAG-TCTTTGTATATTCTATAAGGGAAAAATTCATCCAAAAAACACACTATGAGAAAATCTCTGTTTTCTGGAAGACATT-TAGTATGATGTCAGCCATCTGAACTGTGGTTCTTTTATT-GGTTCGTTACATTTTATTTTAAAGATTAACTGATTTTGCTCTTCAGTGAACGCATATTTCTGAACCTGAAGATTTCTTGAGATTACGCAGACATCCATTTCGCTTCAGGTACTT------GTGGTTTATCTCAA-CTGATAAGATATTCAGAAATAACTCTACATGGCAGA-ATTTTATGAACAAAAGCAATTCAAACTAGACACAAAGACTATCCA-AAAGGTTTTACACCAGACACACTGTGGTTCCC-----CCATGGAATGCAGGG chr4 - 94230402 55586666 55586665 55587052 38643351 38643350 38643737 387 TCAGTTGAAATCTTTGTGT-CTATAGAAGAAAAAAATGCATC----AAACACATTATAAAGCA--CAGTGTTGTCTGGGTGATATTGTAGGATGATGTCAGCTGTGTGAACTGTGGTTTCTTTATTTGGCTCATTACATTCTGTCTTAACCATTAACTGATTT-GCTCTTCAGTAGACCCTTGTTT--GAACCTTAAGGCTCCTTGAGATTGAACAGACCTCCAGATCACTCTAGGTACTTGTACTAGTGGTTTAACTCACTCTGAAGAGACATTCAGAAATGACCATTCAGAAAAGATGTATTAAAAACAAAAGCAGTTCAGTAGAGACAAACACATAGTCTGCAAAGGCTGTTCACAAAGCAAGCATTGGCTTTTTTTGGCTGAGGAATGCAGGG ...:....:-.......:.-:.x..x...::......x....----.......:...:.::x.--.xx....x.....:x..:...-...x...........::.x............::......-..:..:.......:.:.:....xx............-..........::..x.x.:...--......x...::.:.........:x:.....x....xx..:..::........------........x....x-....x:...:..........:..:x.x..x::x...-:.x...x:..........:....:xxx.....x.x.x.:x:..::-.....:.x.x...x.::..x:.xx...:.:::-----.::x........... 9M1I9M1D22M4D17M2D21M1I39M1I36M1D22M2D53M6I14M1I36M1I45M1I32M5I15M 272/370 73.5% 387/94230402 0.0% 27/370 7.3% 53633441 NA +3020 chr4 + 190214555 109239361 109239360 109239428 68 TATATATGTGTGTGTATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATTTATT chr4 - 94230402 32959568 32959567 32959635 61270768 61270767 61270835 68 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGTT .:.:..:x.:.:::.:x....x.....::...:.......:.......:.x......x:..:x..:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 76279793 NA +3105 chr4 + 190214555 109239369 109239368 109239424 56 TGTGTGTATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATT chr4 - 94230402 40286111 40286110 40286166 53944237 53944236 53944292 56 TGTGCTAATGTGTGTGTGTGTGTGTGCATATAAATTTAGAAACATAAGTATATACT ....:xx...................:.....x..x..x.x.:...x:......:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 68953258 NA +3088 chr4 + 190214555 109239384 109239383 109239429 46 GTGTGTGTGTGTATATATATATATATATATATATATATATTTATTT chr4 - 94230402 34066892 34066891 34066937 60163466 60163465 60163511 46 GTGTGTGTCTCCACATTTATATATACACATATATATATATTTATTT ........x.x:.:..x........:.:.................. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 75172492 NA +10418 chr4 + 190214555 109241667 109241666 109242091 425 TGGACACCACCAGTTTTCACCTTGGCACTCTGTT-AGTCCCCATGTCCTTTTTGAGCTTACAGATGGTCTTAATTAAAAACAAGTAGTTTTTAATTTACAACACAGGAAACATTTAGAATTTGTTGTAGAAGTAGAGTTAGTGGAA-CCTAGTAACCCCAATCTCACTCCCAGACAACTACCTCCATGACTTTAATTCATTTGTACAGATTCCTGATGTATTCATAAGTCTTTTTTATTACA--------AGTAAAATATACTTCTACTGCACTTTTTTTTTAAAAGTTGAAA---------------GTCACCATATCAAGACTTGACTTTTCTCCACCCT----GTGTCCTTGAGTTGTGTCAAGCTTGTAGTGGGAGCTGACTACAAAAATCAAGGGCCCTGGGTCTGGAATATTAATGGTTGATGGGCTTCACCTTTCAT--ATGTCACATT chr4 - 94230402 55600514 55600513 55600960 38629443 38629442 38629889 447 TGCAAACAAGCAGCTTGGCCCTTGGTGTTCTCCCCAGTCTTCA-GTCCTTT--GAGTTCCCAGATGGCCTTAATTAAAACAGAGTAGTTTCTAATTTACAGCACAGGAGACATTCTGAACCTGTTGTTGAAGT---GTTAGTGAAACCCCAATAACCCTAATCTCACCCCTAGA-AAGTATGTCAGTATCTTTAATTTATCTATTAAAGTCCCTGCTGTGCTCATAAATCTTCCTTGCTGCACCAGTTGCATTGCGTTGCGCTTCCACAGTACGTCAACCCCCCCAGTATAAACTTCACTTCACGCGTGTCACAGTTTGAAGAATTTACTTCTTTCCATTCTTGGAACACTTTTGACTTTCTTCAGCTTTACAAATAGAGACTAGCACATAGGC--AAGACATTTTGTCTAGAGTATTACGAGCAGCCTTGCTTTTCCTCTCATGCACATCACATT ..x.x..x.x...:..xxx......:::...x::-....::..-.......--...:.:x.......:...........xx:........:.........:.......:.....:x...::......x.....---.......:..-..:.:......:........:..:...-..x..:x..x:.:x........:..:.:.xx.::.:....x...::......:....::..::.:..--------.x.:x:x.:::....:..x.:..x.:xx::::xxx...xx...---------------.....x:.x.x....x..x....:.:....::..----::::::....x..x:x...:x:..::.:xx:...x:x.x:...x.:::--.:.:.x:.xx....:..:.....xx:.:x.x:xx....:x...:....--.::....... 34M1I8M1D7M2D80M3D10M1I27M1D67M8I43M15I34M4I48M2D48M2I10M 271/416 65.1% 447/94230402 0.0% 40/416 9.6% 53641153 NA +3005 chr4 + 190214555 109254084 109254083 109254174 91 CTCAAGAAAAAAAAAAAAAAAAGAATTGTTTAAAGAACAAAGGAAGCAAAAACCCTGATGAATCCCACCAACAAGTTGTGGTATAGATAAT chr4 - 94230402 25623400 25623399 25623490 68606913 68606912 68607003 91 CTCAAAAAAGAAAAAAAAATAACGATTTCTTAAATATCCACAGAAACAAGAAGCAATGAGAATCACATTACTAGGTTCTAGCCCAGATCAT .....:...:.........x..x:...x:.....x.x.x.x:...:...:..x.xxx:x.....x..::.x:.:...x.:.:x:....x.. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 83630684 NA +3779 chr4 + 190214555 109254386 109254385 109254536 151 CTGGGAACGCTATTGAGCAGTTTCCTGTGGCCTGCGTTCACATAACAGCAACAACAGGGTGCTATGTACATGTAGGCATATGTTTATATATATATATATATATATATATATATATATATATGTATGTGTGTATATACATATACATATATAT chr4 - 94230402 17520692 17520691 17520810 76709593 76709592 76709711 119 CTGGGAAAGCTATTGGGCAGCTCCTTCCAGAATATGTTCTTAAAA---------------------TGCATTCAGTCA-----------ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .......x.......:....:.:.:.x::.xx.::....x:.x..---------------------.:...x:..x..-----------.:.x.......x.:.:.x...:.:...:..:..x...:x......x...:..:......... 45M21D12M11D62M 84/119 70.6% 119/94230402 0.0% 32/119 26.9% 91733694 NA +3016 chr4 + 190214555 109254472 109254471 109254545 74 TATATATATATATATATATATATATATATATATATGTATGTGTGTATATACATATACATATATATCTGTTCATG chr4 - 94230402 71630139 71630138 71630212 22600191 22600190 22600264 74 TGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTG .::..::.....:.:.:.:.x.....:....x.x......::...:.x.:...:.:x....:.:.x.x...x.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 37624333 NA +3069 chr4 + 190214555 109254473 109254472 109254531 59 ATATATATATATATATATATATATATATATATATGTATGTGTGTATATACATATACATA chr4 - 94230402 19637126 19637125 19637184 74593219 74593218 74593277 59 ATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATA ...x..::.....x..xx.......:....x...x....::...x...:.....:.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 89617347 NA +3026 chr4 + 190214555 109263117 109263116 109263173 57 AGACTCTGTCTCAAAACAACAACAACAACAACAACAACAAAACCTTTCAAAATAAGA chr4 - 94230402 4280803 4280802 4280859 89949544 89949543 89949600 57 AGACACTATGGAAAAAAAAAAACAACAACAATAACAACAAAAGCTTTCATGTTAAGA ....x..:.xxx....x..x...........:..........x......x:x..... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 104982314 85232241 +17976 chr4 + 190214555 109274661 109274660 109275662 1002 TTTTTCTTTTTAAAATTAAACTAAGTA----CTTAAGACCCCTGAAAATATTA-ATTGGAAAATGACATTTTATATATAACTAAAAAATTACA------AAATTCAGCAAGTTAAACTGGCACAATGGATATTTAATAGCCTGGTACGAAACA--------TATGTCTA--TAATA-------------CAAATTGTCTAGGAATATTACACTGTGAATCTTCTT---------------ATATAAC-------------------ACACGAATAAT---------------TAACTCTCTCTATGAAAA--------TTTTCAGT-GTGTGTCGGCACAGTAAAACCAT-TGATCATATATTACTGCAAATAATTG-AGACCCAGAGTTTTTGGTTATTGAACTTCCCTTTCATTGT----ATTTAAAATACAAAATTAGTTTTTACACAGAAGGTACATGTATACACAATGGCCCTCTTTGTGAAGCCAATGTTTTATTAAAACCCCTTTTTGTCACTCTACAAAAGGGCACTCTAAGCCTACCAACAAAACAGCTGAAAAGAACAGCAGCAATGAGTAAATGTCCCCCCGCTGGGTCTAC-AAAATTGTATGTTCCCCTCATGAAGAAGGCGTGCA-----TGTAGCATGGCTGGGAAGCAAGTGCTGGGTCTATTGTGTATTGTGTATGATCTCAAGTAGAGAAAACCATCTGTCCTTTTGCCCTGAAAAAGG-ACCCCCTGTGAGCCTCTTCTCACGAGCCATTATAGTTTCCTTCAACCCTGACACTAAACAGGCTTTGAACTGACGGCTATGTGACATAAAAAGTTCATCTCTAGCTATTTTTCCCCAGAGGTTTCATAGGGTTTAGGCTAAGGTGCCCAATCATGTCCTAACAAAAAGATTAGTGTGTCCCAGCATAAAGTGACACAGAGATGTGTGACCCACTTGCCATACAGAATAGAG---------AACAGTGAATGTAGTCAACTACA--GAATATGCAAAGGCGCCTGAGGGAAAAGAAATGAGGATGGCTGAGGGC--TTCTGTCTTCACTTGGAAACAAGTGCTCTTTAATGCCAACAAGCATTCTCTCAAAGAGTTGTAATGA chr4 - 94230402 55616813 55616812 55617853 38612550 38612549 38613590 1041 TCTTTCTCCCCACAGTTAAATCAAGAGACATTTTTATACTCCAAAAAGGACCATGTCATAAGATCATATTTTGTACACAACTGAAAAATAAAATTAACTGAATGCAGCATGTTTGTTGAACACAAATGAATGTGAGCCGCCTGCTGCTGGTCACTAGTAGTTATATCAAATTAGTAGCTGTACTGTTTGCAACACGTCTAGGAAAATAAT-TTATGAACCTTATTTGTTAATCAAAGAACATATAACTGTATGTTATATGTATGTTATATAAGTTATAATTTACTTCTGTTGTAATTTACTCTATAAAAAAGTCATTCTGTTCAATTGATTGATGGCATAATTTCAACATCTAATTGCATTTTAT--CAAACAACAACAGATTTGGAATTGCTGGCT-TTAGGCCTCCTTTTGATTGTTCATAAATAAACTGGGGGGCCAGTTATT---CTGGAGGTATATATGCATGCAATTACATCCTTTATGAAGCTGTTGTTTTACTAAGAACCCTAT--GTCAACTCACAAAAGAGTAGTCTTATTCTCTCAACAAAGCAGCTGAAATGAGCAGTAGCAATGAGT-----------------GCCTATGAAAAGTATATACTTCCACCGCGGAGCAGTCAAGCAATCTCTCTTGCA-------GATACAAGTGGTAGCGCTCTTGTATGTTCTGCATAACCTCAAGCAAATGAAACTACCTGTCA-CTCGTCATGAGAAGGATGTCCCCTATGAACCTCTCATCACAGATCACAAGAGTTTCCTTC---------------CAGACCTTAAATTGGTGGCTGTCT--CAAAAAAAGT---CCTCCAACCCTTTTTACTCAGCAGCTTTATAGGGTTTAGACTGAGGTGACCAACCATAGCCTAAGAAAAA-----------CTTGACACAACGTAACACAGATGTGAGCAATTGTGCTCAGGCACACAATAAAGTGTTTAAGAAACACTAAAT----TCAATCACAGTGGGTATGCTTAGGCATGTGAAAGAAGATTATT---------TGAGGACATATCTGTCTTCATTTATAAACAAATGTTCTTTAGAACCAGC-ATTACTTTTCCAAAGAGTTGGAATAA .:.....::::.x.:.....::...x:----:..x.x..:..x:...:x.::.-:.::x..:..x.:.....:..:.:....:......x.x.------:...x.....x...x:x:x::.....xx..xxx.x.::x.....x.:.x::x..--------...:..x.--..:..-------------...xx:.........x..x.:-:.:....:...x..---------------.......-------------------.:.::.:.x..---------------...:.:x......:....--------.x....:.-.xx..x:....:.:.xxx.x...-.:..:::..x...:--....:..:x:-...::::..:..x:...:.-..:::.:...:...x.....----.xx....x.:x::::::....x..---.x.:.....:..:.::.::....x:.x::....:......::x.......:...:.x....x.--....x:::.......:.:.x...x.x:..x:.......:.........x..:...:..........-----------------.:...:-....x.:...::.:..x:.::.:..x..x.:x...-----.x.x...-------..x:......x.:.xx..x....:.:..x..:..:.:......:.:.x:....:.:.....x-:.:.:.x...:..:.:-::.....:...:.....:x....::::..:x.x..........---------------...:.:..:..:..::....:.x.--..x.......---:...:.:.:x.....x.:...x:.:..:...........:..:.....x....:...:x.....x.....-----------.::::..:..x..:.......x:..x.::.::xxx:.xxx::...x....:..---------....x.:...----....::...--.::.....xx....::x...::...:.xx.x.---------.....:.--x..........:..:x......:..:......:x:...:.-.x:.:.:.::..........x...:. 27M4I22M1I39M6I54M8I8M2I5M13I21M1D14M15I7M19I11M15I18M8I8M1I23M1I14M2D10M1I19M1D20M4I24M3D63M2D66M17D6M1I35M5I7M7D62M1D16M1I43M15D24M2D10M3D70M11D53M9I10M4D9M2I32M9D7M2I40M1D26M 611/923 66.2% 1041/94230402 0.0% 197/923 21.3% 53657848 NA +3294 chr4 + 190214555 109285847 109285846 109285885 39 TGTTTGTTGGTTTTTGTTTTGTTTTGTTTTTTGTTTTTT chr4 - 94230402 64669654 64669653 64669692 29560711 29560710 29560749 39 TGGTTGTTGGCTTTTGTTTTGTTTTGTTTTTTGTTTTTT ..x.......:............................ 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 44616193 NA +13504 chr4 + 190214555 109368855 109368854 109369144 290 CAGAGGCTCCCAGGCTGCCAGCTGCTCTTCACTCCCCTGTCGTAAGAATGCAGCTGAGGTTGAAAACTTGTCACCAAGTTGGAGCCAATATCCACCTGTCCCTCTTGTCAGTCTCTTTCTATAAAGTCTTCCTGGGATTTAAAAACTAAAGCCATAAAAATGGGATTTGCCTTGACTCTTTCTAGAACA-GCTATATACCATGCATGCATCATATGTCCCACAATGACGGTGTCTCTTAAAAATTGTGGTATTTAAATAAAATAACAGCTGTGCAGTACTATGAACAGCCA chr4 - 94230402 55665577 55665576 55665866 38564537 38564536 38564826 290 CAGAGGGCTGGGGACTGCCAGCTGCTCTGCCCTTTGCTGCTGGAAGAATGCAGCTGAATCTGAAAACTTGTCACCATGCTGAATCCACAATACACCTGTCTCTCCTGTCAGTCTCCCGTGGCAGACTCTTGCAGGGACTTAAAAATTCAGGCCATAAAAATGGGATTTAACTAGACTTATCCTAGAATGCAATATGTAACATACATGCTCCATATGTCCCACAACAGGAATGTCCCTC-TAAACAGTGATATGTAAACAAGACAACAGCTGTGGAATGGCATGAGCTGTCA ......x::xx:.:..............x.x..::x...::.x..............:x:................x.:..:.x...xx..x........:...:..........::x:x::.:.x....x.x....:.......:.x.:..................:x..x....:x.:......::-:x...:..x...:.....x:..............:::x::....:..:-x...:x...:...x....:..:.:..........x.:.:x:....:.x.:.. 189M1I48M1D52M 208/289 72.0% 290/94230402 0.0% 2/289 0.7% 53703278 NA +13504 chr4 + 190214555 109368855 109368854 109369144 290 CAGAGGCTCCCAGGCTGCCAGCTGCTCTTCACTCCCCTGTCGTAAGAATGCAGCTGAGGTTGAAAACTTGTCACCAAGTTGGAGCCAATATCCACCTGTCCCTCTTGTCAGTCTCTTTCTATAAAGTCTTCCTGGGATTTAAAAACTAAAGCCATAAAAATGGGATTTGCCTTGACTCTTTCTAGAACA-GCTATATACCATGCATGCATCATATGTCCCACAATGACGGTGTCTCTTAAAAATTGTGGTATTTAAATAAAATAACAGCTGTGCAGTACTATGAACAGCCA chr4 - 94230402 55658188 55658187 55658477 38571926 38571925 38572215 290 CAGAGGGCTGGGGACTGCCAGCTGCTCTGCCCTTTGCTGCTGGAAGAATGCAGCTGAATCTGAAAACTTGTCACCATGCTGAATCCACAATACACCTGTCTCTCCTGTCAGTCTCCCGTGGCAGACTCTTGCAGGGACTTAAAAATTCAGGCCATAAAAATGGGATTTAACTAGACTTATCCTAGAATGCAATATGTAACATACATGCTCCATATGTCCCACAACAGGAATGTCCCTC-TAAACAGTGATATGTAAACAAGACAACAGCTGTGGAATGGCATGAGCTGTCA ......x::xx:.:..............x.x..::x...::.x..............:x:................x.:..:.x...xx..x........:...:..........::x:x::.:.x....x.x....:.......:.x.:..................:x..x....:x.:......::-:x...:..x...:.....x:..............:::x::....:..:-x...:x...:...x....:..:.:..........x.:.:x:....:.x.:.. 189M1I48M1D52M 208/289 72.0% 290/94230402 0.0% 2/289 0.7% 53710667 NA +3162 chr4 + 190214555 109374263 109374262 109374371 109 CCATGCTGG----AGTGTGGTGGCACAATCTTGGCTCACCTCAGCCTCGACCTCCTCAAGCT--------CAAGTGATCCTTCTGCCTCAGCCTCCCAGGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197079 18197078 18197199 76033204 76033203 76033324 121 CCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .........----..xx.x:x......xx::..x:.x:.x...xx:..x..xx..:x.....--------......x.:.x:xx.x........::..:........:......x...... 9M4I49M8I51M 75/109 68.8% 121/94230402 0.0% 12/109 11.0% 91177184 NA +3340 chr4 + 190214555 109374693 109374692 109374806 114 TCTCATTTATTTCAAGAGGAGAAAGAGAGGGGTAGGAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAAGGAAGGGCACAAA chr4 - 94230402 36623070 36623069 36623183 57607220 57607219 57607333 114 TTTCCTGTGCTTGACTAGAACTGGGAGAGTGGGATGAGTGCAGGTGTGAGGGCAGGAAGAAGATGAAGGAAGAAATATCAGAAAGAAGAAATGAGAGGAATGAAAGAGTGTGAA .:..x.x.::..x.xx..:.xx::.....x..x.x...x.x...x.x:..:.x..........x........:..x:xx..::.:::...:x..::....x.:...:.::::.. 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% 72751623 NA +3309 chr4 + 190214555 109382789 109382788 109382840 52 AAAACAAACAAAAAAAAACAAACAACAACCAAAAAACCCAGCAAAAATAGGC chr4 - 94230402 8287231 8287230 8287282 85943121 85943120 85943172 52 AAAACAAACAAACAAAAACAAACAGCACCAAAAAAAACCCACAAAAATAAAC ............x...........:..x.x......x..x:........::. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 101095558 89118997 +7202 chr4 + 190214555 109390477 109390476 109390721 245 AAAAGAAGGATAGAGAAGAACAATTCCACAGGACTTGAAAGTAGAGAAATCTATTCAGGCAGTGACTGAATCTGTATCATAGTTTCACATGTTCAAAGCTGTGTTTACATGGTTGAGTTGCAGTTTTCATTATAGGTCCCATTTTCAGAACTTTGTAATTCATGCCTAACTTGACATTACTGACTCTAACCCAGGAAGAAATGTTTTTATGAAACACTGT--GAAATTTATTTTATTAATTTGCTTT chr4 - 94230402 55671819 55671818 55672060 38558343 38558342 38558584 242 AAGATTAGTATAAAGTGAGTGAATTCCTCCCAACTCCAAGGTAGCCAGTTC-ACTCAGGCAGAGAATGGCTTGGTATTGCCATATCCCATTTGCAATGCTATCATTACATGGTTGACTTGCAGTTTCCATTATCAGCCTCATTTTCTAGGGTTTGTACTTCATCCGTAACTGGCCATTAAAGATGTCAGCCCAGCAATGAATATTATTCCAAAACTTTGTTAGAAATTGGC----TTAGCTTGCCTT ..:.xx..x...:..x:::xx......x.xx:...:x..:....xx.:x..-.:........x..x..:x.:x....:::x:.x..x...x.x...x...:.xx............x.........:......x:.:.:.......x:::x......x.....x.x.....x.x.....xx..:x::.:.....x..x:...:..x..x::....x:...--......x::----...::....:.. 51M1D168M2I9M4D12M 159/240 66.2% 242/94230402 0.0% 7/240 2.9% 53718658 NA +3938 chr4 + 190214555 109404255 109404254 109404559 305 CCAGAAAAAAAAAAAGAAAGAAGGAAGGAAGGAGAGAAAGAGAGAGAGAGAGAGGA---AAGAAAGAAAGAA-----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----------------AAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAA----------AGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAGAAAGAAGGAAAGAAAG-------AAAGAAA--------GAAAGAA------------AGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAGAAAGAAAGAAA--GAAAGAAAAGAAAGCA-----AGAAAGCTAAAAACTGTAT chr4 - 94230402 27548067 27548066 27548438 66681965 66681964 66682336 372 CTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAG--AGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGAACCAAGAAAACATAAACTCACCAAACAAATGCACTTGGAAAGTACAGACATTGTGCAACAAGATGAACTGAAACAGCAAAAGGAACAAGAGTGGAACAAACTGGAAGAGCAGAAAATAGACACAGAAGGGCAAAATCTTCAT .::..::..x........xx.:x.:.:x..::x:..:....:.:.x.....x.:..---.::.:..:....:-----....:xx:.:.x.:..xx:...x....:.:.:..----------------..x:.........x:.........x:x..x:xxx......::..:.:...:x..--.....----------..x..xx.xx:::....:..x::...x.:......xx...:...x.x.:-------...x...--------.....x.------------.:x....x::.xx....x.:-.:..:...x:...:x.:..x...--.:....:x.....::.-----....:.x:....x..x:.. 56M3I13M5I34M16I54M2D5M10I49M7I7M8I7M12I20M1I23M2I16M5I19M 194/303 64.0% 372/94230402 0.0% 71/303 23.4% 81856188 NA +3405 chr4 + 190214555 109404256 109404255 109404343 88 CAGAAAAAAAAAAAGAAAGAAGGAAGGAAGGAG-AGAAAGAGAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 79555895 79555894 79555983 14674420 14674419 14674508 89 CAAAATACAAGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAGAATGTAAGAAAGAA ..:..x.x..:...:.xx..:....x.::..:.-..::....:........:.:....:...:....x:xxxx....x.x......... 33M1I55M 61/88 69.3% 89/94230402 0.0% 1/88 1.1% 29848361 NA +3181 chr4 + 190214555 109404267 109404266 109404332 66 AAAGAAAGAAGGAAGGAAGGAGAGAAAGAGAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 48273073 48273072 48273138 45957265 45957264 45957330 66 AAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAA ..:..:....x.....::.x.:.....::x..x..x....x:.....:.:...:....::..:... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 61131194 NA +3614 chr4 + 190214555 109404298 109404297 109404408 111 GAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGG chr4 - 94230402 91538039 91538038 91538155 2692248 2692247 2692364 117 GAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGG .....x:...:.:..:x:.x::.........x.......:...------.x...x.::...x.x.........x:::..xx.:xx......x:.xx:.x...:.:..:.:...:... 43M6I68M 73/111 65.8% 117/94230402 0.0% 6/111 5.4% 17866259 NA +3174 chr4 + 190214555 109404338 109404337 109404420 83 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGAAAGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGG----AAGGAAAG chr4 - 94230402 32280615 32280614 32280701 61949702 61949701 61949788 87 AAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAAAG ...:...:...............::...x.xx:...:...x..:..x:...x.x...:.::.x.x..x..x.::.----...:.... 75M4I8M 58/83 69.9% 87/94230402 0.0% 4/83 4.8% 77123723 NA +3057 chr4 + 190214555 109404381 109404380 109404447 67 AGAGAGAGAAGGAAGGAGGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAA chr4 - 94230402 48273073 48273072 48273139 45957264 45957263 45957330 67 AAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA .::.......x.....:..x......:::x:.x::x.:..x..:.....:.:.:.:.......:... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 61131308 NA +3116 chr4 + 190214555 109422668 109422667 109422711 44 TTTTTTGTTTTGGGTTTTTGTTTGTTTGTTTTTGTTTTTTGTTT chr4 - 94230402 59937402 59937401 59937445 34292958 34292957 34293001 44 TTATTTTTCTGGTGTTTTTGTTTGTTTGTTTTTGTTTTTTGTTT ..x...x.:.x.x............................... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 49485266 NA +3202 chr4 + 190214555 109422669 109422668 109422723 55 TTTTTGTTTTGGGTTTTTGTTTGTTTGTTTTTGTTTTTTGTTTGTTCGTTTGTTT chr4 - 94230402 87553052 87553051 87553106 6677297 6677296 6677351 55 TTTATGTTTTGTGTTCTTGTTGGTAGGTTGTTGGGTTTTGTTTGTTTGTTTGTTT ...x.......x...:.....x..xx...x...xx...........:........ 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 21869617 NA +3496 chr4 + 190214555 109437700 109437699 109437773 74 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTGCTGAGTAGCTGGGCCTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:...........:.x...x.xx.x........x:::.........:x.....x.:.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 91240574 NA +22593 chr4 + 190214555 109462883 109462882 109463628 746 AAATACTTGCTTTT----TCAGGTCCAGCCCAGAATCAAATGCAGGTTCCATCTGGATATGGATTGCATCATCAAAACTATATTGCTCCCTCAGGACATTACTCTCAAGGACCTGGGAAAATGACCTCATTGCCATTGGATACCCAGTGTGGTG---ATTACTACTCTGCTCTCTATACAGTACCAACACAAAATGTGACTCCTAACACA------GTGAACCAGCA----------ACCAGGAGCACAGCAGTTGTACAGCAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCACTCTAGGATCTTTCCAAGGTGCTGCATCGTCAGCATCCCATTTGCATACGAGTGCCTCCCAACCATACTCCTCTTTTGTGAATCACTACAATAGTCCAGCCATGTACTCTGCCAGCTCTTCTGTTGCGTCTCAGGGATTTCCCTCTACTTGTGGTCATTATGCTATGTCAACTGTTTCTAATGCCGCGTATCCTAGTGTTTCATATCCCTCTCTGCCTGCTGGTGATACATATGGGCAAATGTTTACCTCACAGAATGCTCCGACTGTTAGGCCAGTTAAAGAT---AATTCATTCTCTGGTCAAAATACAGCTATCAGCCATCCATCGCCACTTCCACCTCTACCATCACAACAGCACCACCAGCAGCAAAGTCTTTCAGGATACAGTACTCTAACGTGGTCATCTCCAGGCCTTCCATCGAC---------TCAAGACAATCTCATCCGAAACCACACAGGATCCCTGGCTGTAGCGAACAAC chr4 - 94230402 55703079 55703078 55703798 38526605 38526604 38527324 720 AGATGCTTTCTCTTCGTTTCAGGTCCCGTGCAGAGTCAGATGCAGTTCCCCTCTGGCTATGGCTCGCATCCTCCGAACTACAGTGCACCCTCAGGACACTATTCCCAAGTGCCCAGTAAAGCTGTTTCATCACATTTGGATAATCAATATAGAGCCAGTTACCAATCTCCTTACTATTCAGCACCAGCACAAAATGTTA----TGACACCACCTGTGGGAACCAATGTGTTGAATACGCGGGAATCACAGCAGTTCTACAACAG---TTCTACTCCTCCCCATACAGTGGGGTTGACTGAAGGACCCGCTCAAGGAGCAATACCATCTGGATCCTACGTGTATACAAGTGCTCAGCAGTCATATTCTGCATTTGGTGATCACTACAACACTTCAGTCA------------GCTCTTCAGTTGCATCTCAGGGATTTCCCCTTAATTCTGATCATTATGCCATGCCCGTGGTTTCTAGTGCCATGTATCCTAATGTTTCCTATCCTCCTGCAGCTACTAGCAGCATGTATGGGCAGGCATTTACCTCTCAGAGCCTTCCTGCAGCCGGACAGTTCAAAGAGACAAATACATTTTCTAGCCAGAGTAC----ATCAG-----------------TACCTCATTCACTTCAACAGCAC------------GTTCCTGTGGGATATA--ACTCTA-------CATTATCAACTATTTCATCTGCTCAGTCCTTTCAGGACAACCTCAGCAAGAGTCTCACTGGATCTGTTGCTAAAGTAAACAAC .:..:...x..:..----........x.:x....:...:......x.:..x.....x.....x.:.....x..x:.....:.x...x...........:..:..:....x:..::.x...::x:::....::.xx.......x:..:.:.:.x.---:....:.x...x..:x....x...:....:..........x.----.:....x------.x......:::----------:.x:.:.x..........x....:...---.:..x..x.:..:....:x.....:.:x...xx....:.:x::.....x..x::.:.:..x.x....:.:x..:....:.....::xx..::....:..:x.x....xx:..........:.x.:...:..------------.......x.....:...............::..x..x..:.........:...:.x::x.......:....::........:......x.....::..x::x..:..:.::::.::........::::........x....::x:...x:.x.:::.:.x:x.:.....x---...x....:...:.:..:.:...----.....-----------------:.....xx:..::x.........------------:x..:.x::.....:.--......-------...:x:..:x:x..:....x:.---------...:.....:....x.x::.::.x...x.....:x.x...:x..::...... 14M4I136M3I42M4D7M6I11M10I27M3D131M12D170M3I23M4D5M17D23M12D16M2D6M7D22M9I52M 470/685 68.6% 720/94230402 0.0% 96/685 14.0% 53759804 NA +3121 chr4 + 190214555 109476044 109476043 109476130 87 TGGCATGATCTTGGGTCACTGCAGCCTCTGCCTCCCAGATGCAAGCGATTCTCATGTCTCAGCCTCCTGAGTAGCTGGGATTACATG chr4 - 94230402 18197114 18197113 18197194 76033209 76033208 76033289 81 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG ......x..x..------..:.....:xx:x..:.::.:.x....:.x...x..x.x........::::.........:.:....:. 12M6D69M 56/81 69.1% 81/94230402 0.0% 6/81 7.4% 91278930 NA +19295 chr4 + 190214555 109481556 109481555 109481830 275 TGCATGTTGGGATGTTCTTTGGAATGTCAGAGTTCTTTCTCACTTTTAATGCAATG---TCAAATTTTTATTTCTCATCTTTCCTGTTGGTTTGACTCTTATGTTTGTGCTTTCCACTTTACAGGCGTGCAGTATGGTGAATATGTTAATAACCAAGCTAGCTCCGCACCAACTCCCTTGTCATCAACTTCCGATGATGAGGAAGAGGAGGAGGAGGATGAGGAAGCAGGTCTGCTTTAGCTTTACACCAGT-TCTTGATCTTTTCCTGCTCAAGTTTT chr4 - 94230402 55715278 55715277 55715554 38514849 38514848 38515125 277 TGCATGTTGGGATTTTCTCTGGAGTGGCTAA--TATCTCTCACTTTTATTGCAATGATTTGTGACTTTTGTTTCTCATCTTTCCTGTCTGTCTGATTCTTATGTTTGTGCTTTCCACTTCACAGGCATGCAGTATGGTGGATATGTTAATAATCAAGCTAGCTCTGCACCAACTCCCTTGTCATCAAGTTCAGATGATGAGGAAGAGGATGAGGAGGATGAGGAAGCAGGTTGGCTTTAGCTTTACACCAGTATCTTATTCTCTTCCTACTCAAGTTTT .............x....:....:..x.x:.--.x.:...........x.......---.xx:.:....:.................:x..:...:.......................:......:............:............:...........:......................x...x.................x.....................:x...................-....:x...:.....:.......... 31M2D23M3I193M1I26M 241/273 88.3% 277/94230402 0.0% 6/273 2.2% 53766278 NA +3625 chr4 + 190214555 109482905 109482904 109483007 103 TACAGGCATGAGCTACCTTGCCAGGCT-TGTAC-TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATAT chr4 - 94230402 8395761 8395760 8395865 85834538 85834537 85834642 105 TACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ....x:..x:..xx.x:.:x......:-...::-...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x.....x.. 27M1I5M1I71M 71/103 68.9% 105/94230402 0.0% 2/103 1.9% 101087144 89127411 +3720 chr4 + 190214555 109482924 109482923 109483005 82 GCCAGGCTTGTACTATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAT chr4 - 94230402 8395785 8395784 8395865 85834538 85834537 85834618 81 GCCATGTGTGTA-TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ....x.:x....-.:.:.::...x.:..:...x..:....:...::x..:..xx...................x.....x.. 12M1D69M 60/81 74.1% 81/94230402 0.0% 1/81 1.2% 101087139 89127416 +3127 chr4 + 190214555 109482933 109482932 109483004 72 GTACTATATATATATATATATATATATATATATATATATATATATATACA--CACACACACACACACACACACA chr4 - 94230402 14964810 14964809 14964883 79265520 79265519 79265593 74 GTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ..::.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........--........::............ 50M2I22M 49/72 68.1% 74/94230402 0.0% 2/72 2.8% 94518123 NA +3169 chr4 + 190214555 109482937 109482936 109483006 70 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.::x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 101087136 89127419 +3286 chr4 + 190214555 109482937 109482936 109483000 64 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.::...x.:..:...x..:....:...::x..:..xx...:...............x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 101087138 89127417 +3193 chr4 + 190214555 109482938 109482937 109483003 66 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 94518119 NA +3098 chr4 + 190214555 109482945 109482944 109483006 62 TATATATATATATATATATATATATATATATATATACACACACACACACACACACACACATA chr4 - 94230402 88147180 88147179 88147238 6083165 6083164 6083223 59 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATATA ..:..:..x:x..............:.x.:.:...:.:.............---..:.:... 51M3D8M 46/59 78.0% 59/94230402 0.0% 3/59 5.1% 21335765 NA +6261 chr4 + 190214555 109491256 109491255 109491418 163 AAAATTGCCAAAGGCTGCTTTAAGATACTTTGTCATTTTAAACCTAGTAGATATTTTGGTTTTCCTTTTAGGTGTTGACAGCTCTTCTACCACAAGCAGTGCTTCTCCAATGCCCAACAGTTATGATGCCCTGGAAGGAGGCAGTTACCCAGGTAATTTGTTT chr4 - 94230402 55718649 55718648 55718801 38511602 38511601 38511754 153 AAAATTCTCAAAGA----TTTACCAT-CTGAGTCACTTCAGTTTTTGT-----TTTTGTTTTCTTTTCTAGCACTTGATAGTTCTTCTACTACTAGCAGTGCGTCTCCTGTTCTGAACAATTATGATGCCCTGGAAGGAGGTGGCTATCCAGGTGATGCATTT ......x:.....:----....xx..-..xx....:..:.:x::.x..-----.....x...:::..:...xxx....:..:........:..x........x.....x:.x.:x....:.....................::.:..:......:..x::... 14M4D8M1D21M5D110M 112/153 73.2% 153/94230402 0.0% 10/153 6.5% 53772607 NA +3430 chr4 + 190214555 109492790 109492789 109492863 74 CTGCAGCCTGGTACTACTGGGCTCAAGCCATCCTCCCTTTTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:::x:..x.....:.....:xx.:.x.xxxx:.......::...........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 91295664 NA +3641 chr4 + 190214555 109498453 109498452 109498522 70 CTTCCAGATTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGCACTACAGGCGTGTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ....::.:......:.x...x.xx.x........:............x......--....::....::.. 54M2D14M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 91301314 NA +12205 chr4 + 190214555 109506299 109506298 109506520 222 TTTTATTTTGTTTTGAATTGCTCTTTCAGCAGTATCCTGGTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAACCTTACTCAGGAGAGGAATATTTTACCTATGACTCCTGTTTGGGCTCCTGTACCTAACTTGAATGCAGACCTCAAAAAATTAAACTGTAGCCCAGAGTAGGTAT chr4 - 94230402 55722464 55722463 55722679 38507724 38507723 38507939 216 TTTTGTTTTTTTCT------TTTTTTCAGCAATATCCAGGTGTGAACCAGCTGTCCTCTTCCTTAGGAGGGTTAAGTCTGCAGCATTCTCAGCAGCCAGAAGGTCTGAGACCCATAAACCTTACACAAGATCGAAATATTTTACCTGTATCTTCAGTTCCAGCTCCTGTGCCGAACTTGAATTCTGATCTTAGGAAATTAAACTGCAGTCCAGAGTAAGTAT ....:....x..:.------:.:........:.....x..............:.....:xx:x.......:..:.....x...x:.....x:..:......:.:........::..........x..:..xx.:............:.:x..:.x...:x:........:..x.........x.x..:..:.::...........:..:........:.... 14M6D202M 167/216 77.3% 216/94230402 0.0% 6/216 2.8% 53783835 NA +9731 chr4 + 190214555 109509993 109509992 109510137 145 TTTATGTTTTTTGCAGTTCATTTCGGTGTACTTTGACAAATATTCCACAGACACAGGCTTTACTGAATAAAGCTAAGCTTCCTTTAGGATTGTTGTTACATCCCTTCAGAGACCTAACGGTAAAGTAAC--ATTTTATAATATTTAT chr4 - 94230402 55723831 55723830 55723976 38506427 38506426 38506572 146 TTTATTTCTTTT-CAGTTCATTTCGATGTACACTGACAAATATTCCACAGACACAGGCTTTGTTAAATAAAGCTAAACTTCCTTTGGGTTTGCTGCTACATCCCTTCAGAGACTTAACGGTAAAGTAGCTTACTTTTTCATATGTAT .....x.:....-............:.....x:............................::.:...........:........:..x...:..:.................:.............:.--.:...x.x....x... 12M1D116M2I16M 125/144 86.8% 146/94230402 0.0% 3/144 2.1% 53786162 NA +10308 chr4 + 190214555 109511918 109511917 109512092 175 TGCCTTTTTCTGCTACAGCTTCTTTATTTTATTTCCTAGCAATTACCAGTGATAACATCAAATACCATTGTGAGGTGCCGATCCTGTCGAACGTATATTAACCCCTTTGTATCCTTCATTGATCAACGTAGATGGAAATGCAATTTGTGCTATAGAGTAAACGATGGTGAGTTTT chr4 - 94230402 55724724 55724723 55724898 38505505 38505504 38505679 175 TATCTACCTTTGTAACAACTTTCTATTCTTTCTTTTTAGCAATTACCAGTGATAACATCAAGCACAATAGTGAGATGCAGGTCCTGCAGAACATACATCAACCCTTTTGTTTCTTTCATTGATCAAAGGAGGTGGAAATGCAATTTATGCTATAGAGTTAATGATGGTAAGTTTT .::..x::.:..:x...:...::.xx.:..x:..::.........................::..x..x.....:...x.:.....:x....:..:..:.....:.....x..:............x.x..:..............:...........x..:......:...... 175M 135/175 77.1% 175/94230402 0.0% 0/175 0.0% 53787194 NA +8953 chr4 + 190214555 109513646 109513645 109513872 227 CCTCGTGTAAATATT---------GATAATAGA--------TATTTATTTTTAGGTGTGTATATATGTGTTTAGTTACAAATTGTGTCTCTAAATTTGTACTGGGACCTCTTAT----CTAGTTCCTGAAGAATTTATGTATAACCCCCTTACCCGATCTTATGGAGAGCCTCATAAACGACCAGAAGTTCAGAATTCAACTGTGGAGTTCATTGCTTCTTCAGATTACATGGTAACTATTCAGTGTT chr4 - 94230402 55725353 55725352 55725587 38504816 38504815 38505050 235 CTTCATGTGAATATTTTTTCTGTTAATAATTGAAATGTCTGTGTTCATTTCAATGATTGTTCGTATTTGCT-----AGAAAGTGTAT----AAATT----CTGGAAACTTTTTTTTTCCTAGTTCCTGAAGAATTTATGTATAATCCTCTGACACGATCTTATGGAGAGCCGCACAAACGGCCAGAGGTCCAAAATTCTACAGTGGAATTCATTGCTTCCTCTGACTATATGGTAATAAATAAATTTT .:..:...:......---------:.....x..--------.:..:....:x.x.xx...x::...x..:.-----.x...x...:.----.....----....:.x..:..x.----..........................:..:..x..x.................x..:.....:.....:..:..:.....x..x.....:...........:..x..:..:.......:x.x.x.:.x.. 15M9I9M8I30M5D11M4D5M4D14M4I130M 167/214 78.0% 235/94230402 0.0% 34/214 15.9% 53788293 NA +3605 chr4 + 190214555 109518728 109518727 109518821 94 AGTGAGTGGCAACGGAAGACTGCTCTACAGAAATGATTGGTTGGCTTGTTGTTGGTTTGTTGTTGATGTTTCTGTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801488 67801487 67801571 26428832 26428831 26428915 84 AATGAGTATCAA------GCTTCTCTTCAGGAGTATTTTATT----TGCTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT .:.....:x...------:..x....x...:.:.:x..x:..----..:.....x..........x..:.x...x:.................. 12M6D24M4D48M 65/84 77.4% 84/94230402 0.0% 10/84 11.9% 41717240 NA +18840 chr4 + 190214555 109520345 109520344 109521630 1286 AATTGTCATTTTTATCT--------TTAGGCTTCCTGGAGATTCACGAACAAGAATAGGATTCATGACCTTTGATAGCACTATTCATTTCTACAATTTACAAGAAGGATTATCACAGCCTCAAATGTTGATTGTGTCTGATATAGATGGTAAGCAGTCAGTAAAATAAAAGCCTTTCTAACTACGGACTTTGAAATGGGGGCTACTTTATTTTAATATACACCTTGCTATATGCTGTGAGGATAATGTCATGCACTTTAGTATTTGTTCAAAATAATTGTTTTTCTGGAAATACTTGATTCTAAGTTATGCCTATGTATTACACACATGTATGTATAATATATACAGAGTGTGTATATTTAATAAAGCAATATTAGCTGGGCGCAGTGGCTGAAGCCTGTAATACCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTAACTAACATGGAGAAACCCCGTCTCTGCTAAAAATGCAAAATTAGCTAGGCGTTG--TGGCGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCATCTCAAAAAAATAAATAAAATAAAGCAA-AATTATAGTACACATTACATGTATGACCTGATAAAAACTAAGATTTTCTAATGTATTCTTTTGTTCGATTTGTTGATTAAAATATGTGTTTTCCCTATAGATGTTTTTCTACCTACACCGGATAGTTTACTTGTGAATCTATATGAAAGTAAAGAGGTA----------AGATTGATTTATTTTCTTAAAGCATAAAAATATTTATATTGTGACTGGTAACTAAAAT----ATTTAACATTTGTTTACTTGATATAT-----TAGTATTACA----AATAATAGACAATATAAA----------TGGCATATC---TATTGACTCCTCAGTTTCCAGTCCCC-----------------AGAAATACAGTGACACATGATACA-CTATGGAATGTTTTA-AAATAAGATTATTCCTTTGCCTT------CTCAGTAATTCAATTTTTGATCTTTGTTTTCTCAGCTTATAAAAGACTTACTGAATGCATTACCAAACATGTTCACCAATACAAGAGAAACACACAGTGCCCTTGGTCCTGCACTTCAGGCTGCCTTTAAATTAATGTCTCCAACAGGTGGCCGTGTGTCTGTATTTCAGACACAGTTACCTTCCTTGGGTGCAGGACTTCTGCAATCCAGAGAAGATCCTAATCAGAGATCAAGTACAAAGGTAT chr4 - 94230402 55727720 55727719 55728776 38501627 38501626 38502683 1057 AGTTGTCTTTTTCTTCTGCTAATGCTTAGGCTGCCTGGAGACTCAAGAACAAGAATAGGATTCATAACATTTGACAGCACTGTTCAGTTTTACAACTTGCAAGAAGGTTTATCTCAACCTCAGATGCTGATTGTTTCAGATATTGATGGTAAGTAACAAG-AAAGCGGAGACATTTTT-----------------TAGAAGCTACTTTTT----------ACTTT-------------------------TTCCCTCTAGC-------------------------GGAAAGATTTGAGTCTCTTGAGTATTTCAGTATTAGGTGAATTT---TATTAAATTTGTAGGGAATATATTTTTGAAAAATAATCATATGCT-------------------------------------------------------ATCTACTGAA---------------------TAGTTGGTGCTTAAAAAG-----------TGAAAATCAAATATTAATTTTGCTTTGAATAAAGCAAGCTTT----------------------------------------------------GTAAAGATTAC---------------------------------------------------TTATCTCTCAGAAAAGTAGATCTTGTTTGGTGGCAGTTACAGCA------------ATGAGCTA--------TGAAATGTTTTGTTCTATCTTAATGTT--ATTTTTTCTTTAT--TAACTTTTTTCCCTACAGATATTTTCCTACCTACACCAGATGGCTTACTAGTAAACCTCCATGAAAGCAAAGAGGTATTGTTACTCCAAATTAGCTTATCACAGTTAAGCAGTTAAATATTCAAAATAAAAGTTCCTTTTAAACTTTGAATTCAAGACT-ATCTGCATAATGTGTAAATGTAATGTTACTTTCTAGTTATAAAAAAAATATTACTCTTTGTTTGGCATGTCATTTTTTAAAGTTACAATTTTGTTTTCCCCTATCGGAGCTAAGCTAAGCTATTTGGTATTAATTGTTATGGCAATAGAACTTTTTAGAAATAGCAGAAAATCTGAAGCTTGCAAATCTCATAAA--CAGCTTTTAATATGT---TTTGCAGCTAATAAAAGATCTGTTGAATGCATTACCAAATATGTTCACTAATACAAGAGAAACGCACAGCGCCCTGGGCTCCGCTCTTCAGGCTGCATTTAAACTGATGTCTCCAACGGGAGGTCGGATATCTGTTTTTCAAACTCAGTTACCATCTTTGGGTGCAGGGCTGTTGCATTCCAGAGAAGATCCCAATCAAAGGTCAAGCACAAAGGTAT .:.....x....:x...--------.......x........:...x...................:..x.....:......:....x..:.....:..:........x.....x..:.....:...:.......x..x.....x.........:.::x..-...::::.::.x...:.-----------------.:.::........x.----------..:..-------------------------.x.x..:...:-------------------------.....x.:....x...xxxxx:.:::.xx......x:::x..x.---...x.x..x.::..:.x:.:...x...:.x...xx.x:..xx...-------------------------------------------------------...xx....:---------------------..::.:::::xx.:...x-----------.:.....xx..x....::.xx..x...--.::x...x..:.x----------------------------------------------------..::..:..:.---------------------------------------------------:.x:x.....:....:..:..xxx:.xx:.:::-.:...:..:.------------....x..:--------.:.:..x..:.:x.x...::.xx....--....x..xx...x--..xx.x.........:....:....:...........:...:.:.....x..:..:..x:.......:.........----------.:...:::....:x:xx.x.....xxx.......:.x.x.:x:.x.xx:xx:....x.----...:..x.:.-:.:.:.x.:..:.:.-----..:.:....x----.:.x...:.x..x...xx----------......:..---.x..:.xx::x..:...:xxx.:...-----------------..xx..x::..:x:.xx..x..::-.x..:...:x.....-.....:x.xx.xx:..xx:x...------....xx..--..::....:..x.x.---..:x.....x........::.::................:........:..............:.....:.....x..::.:..x...........x......:.:...........:..x..:..x:.:.....x.....:..x........x..:...........:..x:....x..............:.....:..:.....:.......... 17M8I135M1D17M17D15M10D5M25D11M25D44M3D45M55D10M21D18M11D27M2I13M52D11M51D33M1I10M12D8M8D27M2D13M2D77M10I58M4I10M1D15M5I10M4I18M10I9M3I26M17I24M1I15M1I23M6I8M2D15M3D218M 684/985 69.4% 1057/94230402 0.0% 373/985 37.9% 53792625 NA +18507 chr4 + 190214555 109524787 109524786 109526403 1617 CTAGCTCTT-ACTATATGATCTGTTGACTTA-GGTGGTACAACATCTTGGCCCTGCAACTGATTTTTATAAGAAACTTGCATTAGATTGCTCGGGACAGCAAACTGCAGTGGATTTGTTCCTTTTAAGTTCACAGTATTCTGATCTTGCTTCTCTAGGTAAGGAAAGTCATCATGGGTACATTTGTT------------------------------------TAAATGAACATTTTTAATGCATAATTAAATCTAAACTCTTCAGTAAGCATTCTCTATATTTTAGGGA-------------------------GAAAAGCATGTGCATTAGAT------------AGACAATATCTATGAAAACTACCAGT--AAAGTTTAAAGCACTATAC-------AAATATAAAATGTCACT---------------TGTATTTTGTTTAGATAGCATGATT--------CCCTTACCATTCTGCTCAACAGTAAACTTTATCATATATTTTATAGATATTACTGTTTTCT----CAG---ATTTGTATGT-TCTTATTT--TGATGG--CTTAGGTTTTCTCATG---------ACTTAGATTTCTTCATAATGTAGAATCTGTACTACTGT------TGGAC-AAGTAAAATATTATTATTTCTATA--------------------------GCTAATAC----------------------------TTTTTGTATTTCTCTC----------------------------------TAAAGCTTGCATGTCCAAGTATTCTGCAGGGTGCATCTATTATTATCCATCATTCCACTATACTCACAATCCTTCACAAGCAGAAAAGTTACAAAAAGACCTAAAACGGTATCTCACAAGAAAAATTGGGTTTGAAGCTGTTATGAGAATAAGGTGTACTAAAGGTATGAAGTTGTAAAAGTTATATTTTATATTA-AATACT--TGTATCAAAGTCAGTGAGCATTCCATGTATTGACTACCTCTGACTGTTCATGATGGAAGACTGTTTGATCTCATTAGCTATACCATGTTTTAAATAGATAATAGTTATTGAATAATCCTTGCCCAATTTTTAAAAATAACTTGAATAAGTAGACAAAAGTAATGTTTGATTTACTCAGAAGAACCTAAGAGAAAGCCTATATTAGAAATGATTTTAGAAGGAGAATTAGAGGAATAGGGAAGATCTTAAATAAGAATTGTCAAAGTAAGGGTCTTTGCCTTCATAATCATTTAATGTACACTTCCTTGGTTTTATGTGAATATTTGTTTTAATCCTTTATTTTACCTTTATTTTAAATCTAGGATGAGTTATATAATAACCCTCATTTGCTT--AATTTTGTAAATTAAATGTTTAGTC----AGATTATGTCTGACTTCAAGTCACATGTGAGAAAATGTAAATAAGGTTAGGTGTCAATACAAGTGAAATGTATAGTCTCCCTTTTATATAACGTCCACTAGTTTTTTTGAATTAATATTTTAGAAAC---TCTGCCTATGCTTGAACCTTGACTCCCCAGTTATCCTTTTGATTCAAAATCATAAACATCTTTGACTTAAAAAAGTAACTTTAGCTTGAGGTGAAGATACTATTGTTAACTTGATTTTTTATGATTTTCTCCTTTTTAGGTCTTTCAATGCACACTTTTCACGGTAACTTCTTTGTCCGTTCTACTGATTTGTTATCCCTTGCCAACATCAATCCTGATGCTGGATTTGCGGTGCAGTTGTCAATTGAAGAAAGTTTAACAGATACTTCCTTAGTATGTTTTCAAACAGCCCTATTATATACATCAAGCAAAGGTAA chr4 - 94230402 55729303 55729302 55730860 38499543 38499542 38501100 1558 CTAACTCTTTCCTGTTTAACTTTTTCACCAAAGGTGGTCCAGCATCTTGGTCCAGCGACAGATTTCTATAAAAAGTTGGCATTGGACTGCTCAGGCCAGCAGACTGCTGTGGATTTATTTCTCTTAAGTTCACAATATTCTGATCTAGCTTCCCTTGGTAAGGAATACC-TAATAGATGTATTTATTCTTTCCACAGTGTTTGTCTCAGAAAGCACAGGCTACTTAAGGAATTCCTGAATTGCGTCACTCATTTTGCACT--TCTGTAAGTGCAGCTAATGTTGTGGAGGCATAGACTTTGAAGTTGATATCAGTAAGGAACAGGAGTATTGGATTAGTGCTATCAAAGACAATTTATTCTGAGATCTCGGGTTTAAACTAGAAACTACTCTTCTACTCAAAAACATAAAACAGTCCGGTGGCAGGAAATGAATGAGGTTTAATCAGAGGGGAGAACTGGGAGCTGTTCTCACCTTTCAGCGTTAAACCAAAATTTGTC------TCTGTATACACCTTTGTTTGATAGTGCAGGCAATTTGTACGTGTCTTAGTTGCTGAAGGTACTTTGAAGTGTTGAAGTAAATGTATAATTAGGTCACTGCATGTTGAAGTGACT-TATTACTGTCTTCAGTGAACTGAGTCACAGACAGTTCTTGTTGTACAGACGTAGTTCAAATCAGGACAAAGGTCAATATAGGTGTGGCTTGAAAACATTGTATGCAGTTTTTGTATTTACCTCATGGTTAATCTATTAACCATATATTTTTGTCCTTCACAGCTTGCATGTCCAAGTATTCTGCAGGATGCATCTATTATTATCCATCTTTCCACCATAGCCATAATCCTGCTCAGGCAGAGAAGCTGCAAAAAGACCTTAAAAGATACCTTACCAGGAAGATAGGATTTGAGGCGGTTATGCGCATAAGATGTACAAAAGGTAT------------------------ATTACAATACTGTTGTATGTGAGAAAGT-----------------------------------TGATGTAA--------------------------ACATTTTAACT--------GTTAT-------------------------------CTTGAATG---------------TGCTTATCCTTCACTGAAGAA----GGAGA-------TATTTTCAAC--TTTTACAA--------------------CAGCTGTTACATTAGCATTTTCCA---------TTTGGATGACAGAGGCTTTTTTTGTGTGTATTCTTTGTATGATTAAGAT-----------TGCACCATTTCAATTTCAACTTAG--TTGAAATGCGTAGTGTAAGAGCAGTAATCAATTTGGAGTGTTGAGGATTGAACATGAAGTCTACAGGATCAC-TCTGA-----------------------------AAGGTCTAGTG---ATTCACGT--AATG-ATTGATTCTGCTTAATAT----------------TTGGGGTAAATGTTTTTAGTATATATTTCCATATTTTTAAAGTTTGA----------GAACTGTGGGCTTTAAAT--------------ATTTACCAGAAT--TTTTCACACTGCTTAACCGTACTGT------CTGAATTATTT--GATCTACTTCT----AGGTCTTTCAATACACACTTTTCATGGAAACTTTTTTGTCCGATCTACTGACTTATTGTCTCTCGCCAATGTCAATCCTGATGCTGGGTTTGCAGTACAAATGTCCATTGAGGAGAGTCTGACTGACACATCTTTAGCTTGTTTTCAAACAGCTCTTTTGTATACTTCCAGCAAAGGTAA ...:.....-x..:.x.:.::.x..x..:x.-......x..:........:..x..:..x.....:.....:..::.x.....:..:.....:..x.....:.....x........:..:..:...........:...........x.....:..x.........x::.-.x..:.:.::....:..------------------------------------.x..x...:x::.xx.x...:.x.:.x.x.:.:x...--..x.....:::xx::x..:..x.:.:.:-------------------------:.::.:..x.x.:...:...------------.......x.x.x:x:.:.::x.x:..--...x.xx...x:...x.x.-------...:......::x:x.x---------------..x:x...:x.:...x:.x.x:.:.--------::..:...x...x..x:x.x.x:...x...:..------.:.:..x.:.::x:.....xx.----...---.......:..-.....x..--...x..--...x.:xx.x:.x.x.---------.x....:.:x..x...:x..x..x:x..-..:......------..:..-:...x.x.x.:x:..x..x:.:..--------------------------.::....:----------------------------...........x:...----------------------------------:.x...........................:....................x......:...x:..:......x.x..:.....:...:.:...........x...x.:..:..:..x..:..:..x..:.....:..x......x.x.....:.....x........------------------------....-......--.....xx:..xx...-----------------------------------.....x..--------------------------.::......x.--------.....-------------------------------.......:---------------..:..:x::.x.x.x......----:....-------....xxx..:--.....x..--------------------x..x.x...x..x..x...x..x.---------:..x.x:xx..x.:x.x...xx...::::x.:...x..x.x..xx::..-----------.x.x::....:.x:..:.x:...:--:.:::...x..x:.:...x.:.xx.x..:x::..--.:.x...x::...:..::.xx....----:...:.:-.....-----------------------------.....:x:...---..x..x..--....-..x.x:..:x:..x....----------------..x.::.x...:....x::x.:---.:.x.x...x:..:..x:....----------:xx..x.x.::.:x....--------------.:...xx.:.:.--:...x:.x:x:xx.:.xx:....:.------..x:...x...--...:.x..:..----............:...........:..x.....:........x........:..:..:..:..:.....::................:.....:..:..:x....x.....:..:...:.:..x..:..x..:....:x..............:..x..:.....x..x........... 9M1I21M1I137M1D17M36I37M2D28M25I20M12I26M2I19M7I17M15I25M8I33M6D22M4I3M3I10M1I8M2I6M2I16M9I28M1D9M6I5M1I24M26I8M28I16M34I168M24D4M1I6M2I15M35D8M26D11M8D5M31D8M15D21M4D5M7D10M2D8M20D24M9D49M11D24M2D34M2I25M4I7M1D5M29D11M3D8M2D4M1D18M16D22M3I22M10D18M14D12M2D25M6D11M2D11M4D180M 914/1323 69.1% 1558/94230402 0.0% 529/1323 40.0% 53795484 NA +12349 chr4 + 190214555 109530287 109530286 109530467 181 AGCTGTGGATCGGTCCGTTTCATCAAGTCTGTCAGATGCAAGAGATGCCTTAGTGAATGCTGTAGTGGACTCATTGTCTGCATATGGCTCAACTGTCTCAAATTTACAGCACTCTGCATTGATGGCGCCCAGCTCCCTCAAGTTGTTTCCTCTCTATGTTTTGGCCCTTCTCAAACAGGTA chr4 - 94230402 55732251 55732250 55732431 38497972 38497971 38498152 181 AGCTGTGGATCGCTCAGTTTCATCTAGTCTTCCAGATGCAAGAGATGCCTTAGTTAATGCTGTGGTAGACTCTTTGTCAGCATATATGTCAACTGCCTCAAACCTGCAGCAGTCTATGCTGATAGCACCAAATTCCCTCAAGTTGTTTCCACTCTATGTTTTGGCTCTTCTCAAACAAGTA ............x..x........x.....x:......................x........:..:.....x.....x......:xx.......:......::.:.....x...::::....:..:..x.::.................x..............:...........:... 181M 151/181 83.4% 181/94230402 0.0% 0/181 0.0% 53798036 NA +10373 chr4 + 190214555 109531358 109531357 109531601 244 TGAAAACGTTTATCTTTTT-CCTTGTAGAAAGCATTTAGAACGGGTACAAGCACACGGCTGGATGATCGTGTATATGCCATGTGTCAGATAAAGTCTCAGCCACTTGTTCATCTAATGAAAATGATTCATCCCAACTTATACAGGATAGACAGATTGACAGATGAGGT-ATGTAT------------------TTT----AGTGCATTTGAAATGTTTAAATTTGAATATATTTGAGTGTCTTGTTCTACAGCTAAGATGATAATATA chr4 - 94230402 55733579 55733578 55733846 38496557 38496556 38496824 268 TAACAACATTGGTTTGTTTGTTTTACAGAAAGCTTTTAGAACAGGCACCAGTACACGCTTGGATGATCGTGTTTATGCAATGTGCCAGATAAAGAGTCAGCCTCTTGTTCACTTGATGAAAATGATACATCCCAACCTGTACAGAATAGACAAGTTGATTGATGAGGTAATGTATGAAGCCTAACTTGTAACATTTTCAAGGTGCAGTAGTGTCTTTTAAACTTTAACGTGTTACAGTAATTTATCTGAAAGTCATGATAGTAATGTA .:.x...:..x:.:.x...-::..::.......x........:..:..x..:.....x:.............x.....x.....:.........xx......x........::.:...........x.........:.:.....:.......::....:x........-......------------------...----:.....x.x.x:x:x......:..x..::.:..xx...:x:..:.::x.x..::.x...::....:.. 19M1I148M1I6M18I3M4I68M 180/244 73.8% 268/94230402 0.0% 24/244 9.8% 53797779 NA +8784 chr4 + 190214555 109532614 109532613 109532748 135 TCACATTCTCTCTTTTTCTTTTCAGGGTGCAGTACATGTTAATGACAGGATTGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAGAAGCTGACAAGAGAAGGTGCTTTCCTTATGGACTGTGGCTCTGTAAG chr4 - 94230402 55735143 55735142 55735277 38495126 38495125 38495260 135 TTACTGTCTGTTGTTTTCTTTACAGAGTACAATACATGTAAATGACAGAGTTGTTCCTCAGCCTCCTCTTCAGAAGTTATCTGCAGAGAAATTGACAAGAGAAGGAGCTTTCCTTATGGATTGTGGCTCAGTAAG .:..xx...x.:x........x...:..:..:.......x........::....x..x.....x........:..:..:...........::.............x..............:........x..... 135M 111/135 82.2% 135/94230402 0.0% 0/135 0.0% 53797471 NA +8000 chr4 + 190214555 109538454 109538453 109538607 154 TGAGAAAGGAAAGTTTCCTAATTGTATTTCTTTTA-CCAGACACATCTTCCAGAGCTAGATACACTTTCATCAGAAAGAGCCAGATCCTTCATAACTTGGCTTAGAGACAGCAGACCATTAAGTCCAATCCTTCACATAGTAAAGTAAGTACTTT chr4 - 94230402 55737651 55737650 55737805 38492598 38492597 38492752 155 TGATAATAAAAGATAACTTATTTTCATTTCTTTCAACCAGACGCAGCTTCCTGAGATAGATGCACTTCCTTCAGAAAGGACACGGTCTTTTATATCCTGGCTTAGAGACAACAGACCTTTAAGTCCAGTTCTTCAAGTAATAAAGTAAGCATTTT ...x..x::..::.xx.:..x..x:........:.-......:..x.....x...x.....:.....:.x........::.xx.:..:..:...x.:.............:......x.........:.:.....x:..:.........:.:... 35M1I119M 116/154 75.3% 155/94230402 0.0% 1/154 0.6% 53800803 NA +33960 chr4 + 190214555 109539538 109539537 109540465 928 AAATGCCCTTTTCT-TTCTTCCAGAGATGAGAGTCCTGCCAAAGCAGAATTTTTTCAGCATTTGATTGAAGACCGGACAGAGGCTGCATTTTCTTACTATGAATTTTTGCTTCATGTTCAGCAGCAGATTTGTAAGTGAAGTAG-AATAAAATTGAATAAGAAAAAGATCTATAACCTAGGTAAAGCATAATCTGTCAGAGAAGCGCGTGAGAAATTTGAAATGAAGGCATTTGTTAAT-ACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAAAAGTAAAGGGGAAG------------AAAGAACTTGACAGATCTTTTTCAAC-TCAAATTAATGGTAACGATGATGCTGTTTCACCAAGTATATTTTGAATTGGTTTCTACACATTTCCAGTAGTATGGCAGTACAGTGCTCTGTTCATTGCAAGCTGGCAAATTTATGTAGCTATGTGGAATGATATGTCAT-----AATGTAAAATTAGATAAATTCTTTTTTCTTATAATTAATA---TAACATTTCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCATTAAATGAATTCAACATTTTCTCTGTAAAAACAATAGAGTTTC-----AGTACATGAACTATAGAAAAAAATCTATATATAATGTACATAAATGTTACATTTGTAAAGAAAATGTAAAAATGTAACTATAGCATATGAATT-GCTTAAACTGTGCTGCATTGTTGGATGAC--------AACTCTTTTTGTCACAGTTAGAGAATGAGGTTGACTA-------ATGCATATTATGAATTGAGTCCACAAAGGAA-CACAAAACTCTTTGTAATTCTGTTAAATCTTTTATGTAGATTTATTTATGATCAGCCTACTAATTAAAACTATTTCGCTTGACAGTATGGTTT chr4 - 94230402 55738358 55738357 55739286 38491117 38491116 38492045 929 AAAGACCTTCTTCTATTCTTTCAGAGATGAAAATCCTGCCAAAACAGATTTTTTTCAGCACTTAATTGAAGATCGGACAGAAGCAGCTTTCTCTTATTATGAATTCTTACTGCATATTCAACAGCAGATTTGTAAGTGAACGAGAAATAAAATAGAA----AAAAAGAACCCGGCTCCAGGT--AGCATTGGCTG--AGAGAAGCATACAGGAAGTTGCAGAAGTGGGTGTTTGTTCTTCACAATATGTAGTAACCAGAACTGTTCTGGAAACTTT----ACAGCTAAAGGAGAAGTATACATTTCCAGAGGAGTTTTGCAGATATACTTCACTGTAAAAGTGCTAGGAGCAATGAAGCTGTTTCACT-AGTAATCTTTGAATTGGTTTATACATGTTTCCAGTAGTGCAGCAGTATGGTGCTCTGTTTATTGCAAGCTGGTGAATTTATGTAGCTATGTGG---GATATTTCTTAACGAAATGTACAATTAGGTAAAGCCTTTTTTCTTACGTTTGTTATGGTAGCCCTTCAAAAATCAAATTCTTAACAAAGATGTCAAAGGGCAGTGCTG-TATGTTGGTTGTTTATATGAATTTCTTTTTAA-AAGGAATGATTCGTATTTACTAAA-GACTTCAGCAAATTCCCTGTGAAAGTTGTAGAATTTCACTAAAGTAAAAGAATTGTAGAAATGAA---ATATATGATGTACATAAGTATTACATTTGTAAAGAAAATGTAAAAATGTAACTAAA--AAAAGACTTAGCTTAG--TGTACGGAATTGTTGGGTGTTCAATGATGAATTGTTTCGGTCTC------------AAGTTGACTATTAAAACATGC---TTAAAAAAAAAATCCCTGTAGAAAGAACACAACTTCTTG---TTCTGTTTAAT-TTTTAGGTGAATTTATTTAAGATTGGCTAACTAATTAAAAATATTTTGCTTTATTGTGTGTTTT ...x:..:.:....-.....:.........:.:..........:....x...........:..:........:........:..x..x..:.....:........:..:..x...:....:...................xx..-........x...----.......x.:xx:x:.:....--.....x:x...--........::::::...:..xx.:.x.x:..::......xx.-....x...:.:::xx...x...x.x::x..::....----.x.:x......:....------------:.:..::..x:.....x.x:....x:-.x...x.:x.:.x.:.:....x..........:-....xx:.............x....::...........:::......::..........:............::...................---.....x..x.-----......x......:....x:...........::x..:x..---..:.x:...x::.x.::..:...x:xx.:.....:....:....x..x.:-::....:x...............x........-........x...x....:.:....-..x....:..xx...:....:...::x:....:....-----....x.x...:.:......x:..---......:..........:.:..................................x.--.x.x..x..-.....:--...:.x.x........:..x:--------..:.x...:x...x.------------.:........-------....---...x:..xx:.:...x::x..:..-x...x....::...---.......x...-.....x..::.........x...::..:x...........x.....:....x.:x..:..x... 14M1I129M1I12M4D21M2D11M2D42M1I36M4D16M12I26M1I33M1D93M3D10M5I40M3I50M1D32M1D24M1D37M5I23M3D56M2D9M1I6M2D21M8I15M12D10M7I4M3D24M1I14M3D11M1D64M 668/883 75.7% 929/94230402 0.0% 91/883 10.3% 53801180 NA +8924 chr4 + 190214555 109539999 109539998 109540486 488 TGTAAAATTAGATAAATTCTTTTTTCTTATAATTAATATAACA---TTTCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGT--GTTATTTGTTTATATGAATTACTTTTTAACAAGGAATGTTTCTTATTCATTAAATGAATTCAACATTTTCTCTGTAAAAACAATAGAGTTTCA-----GTACATGAACTATAGAAAAAAATCTATATATAATGTACATAAATGTTACATTTGTAAAGAAAATGTAAAAATGTAACTA----------TAGCATATGAATTGCTTAAACTGTGCTGCATTGTTGGATGAC-AACTCTTTTTGTCACAGTTAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGA-ACACAAAACTCTTTGTAATTCTGTTAAATCTTTTATGTAGATTTATTTATGATCAGCCTACTAATTAAAACTATTTCGCTTGACAGTATGGTTTGGTGATTTTTTGGG------GTTTTTG chr4 - 94230402 34467400 34467399 34467866 59762537 59762536 59763003 467 tgaaaaattttatgattctatgattcttatgtttgctatgGCAGCCCTTCAAAGTACAGACTCTTAACAGAGATGTCAAAGGGCA---GCACTGTATGTCAGTTGTTTATATGAATTTCTTTTTGA-AAGGAAGGATTTTTATTTACTAAA-GACTCCAGCA-----------AATGTTGTAGGAGTTCACTGAAGTAAAAGAACTGTAGAAATGAA---ATATATAA---ACATATGTATTACAATTGTAAAGAAAATGTAAAAATGCAACTAAAAAAAGACTTAGTGCATGAAATTGTTGAG-----------TGTTCAACGATGAATTGTTTCAGTCTCAGGTTAA---------CTACTAAAACATGCTTGAAAAAAAATCCCAGTAGGAGGAACACAACTTCTTG---CTCTATTTAATTATTT---TAGATGAATTTAAGACTGACTTA-TAATTAAAAATATTCTGCTTTTTCATGTGTTTTCATATTTATGTAAGTATAATGTTTTTG ..x......xx..:.x.::x.xx.......:x..:x...::..---:...x::::x:::.....x:xx.......:....:....---.:..:..--..:.x...............x......:.-......x.x..:.....:.:....-..x.:..:..-----------..x::x:...::x....-----...x.x.....:......x:..---........---.....x:.:.....x......................:.....----------...:::.....x.xx..:.:-----------....x:.:..:-..:.x...:x...x...x.x:.---------:x.....x:...::.xx:..xx:.:...xx:x....-:x...x....::...---:...:..x...:x...---.....xx.....x..::::.:..-.........x....::....xx:x:.:..x...x:.:x..x.x.::.------....... 43M3I39M3D7M2I29M1D24M1D10M11D17M5I22M3D8M3D43M10I20M11D11M1I22M9D36M1I15M3D16M3D23M1D47M6I7M 302/439 68.8% 467/94230402 0.0% 77/439 17.5% 75072599 NA +3085 chr4 + 190214555 109560075 109560074 109560114 40 TCCCGCTCTCTCGCTCTCTTTTTTTTTTTTTTTTTTGGTC chr4 - 94230402 18929912 18929911 18929951 75300452 75300451 75300491 40 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTC .::.x.......x........................... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 90630163 NA +3664 chr4 + 190214555 109591261 109591260 109591334 74 CTGCAACCTCCACCTGCCAGGTGCAAGTGATTCTCATGACTCAGCCTCCCGAGTAGCTGGGACTACAGGTGTGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..x.::...x......x...x..x.:........::.:.........:......x...::. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 91394135 NA +3001 chr4 + 190214555 109605953 109605952 109605993 41 TGGGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTG chr4 - 94230402 36775835 36775834 36775875 57454528 57454527 57454568 41 TGGGTTTTTGTTTGTTTGTTTGGTTGGTTGGTTGATTTTTG ......................x...x...x...x...... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 72830118 NA +3010 chr4 + 190214555 109656320 109656319 109656398 79 AAGTAAAGGGAGGGGCTCTAACTTTTACTCTCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAC chr4 - 94230402 87765857 87765856 87765935 6464468 6464467 6464546 79 AAGGAAAGAATATGCTTTCAGCATTTACCTTCTATTTCTCTTTTTTGCTTTTTCTCTTTTATTTTTCCTCCCTGAACAC ...x....::x:x.x:.::.:.x.....::....:..:.:......x:.....:.:....x.....::.:::..:.x.. 79M 50/79 63.3% 79/94230402 0.0% 0/79 0.0% 21890463 NA +3160 chr4 + 190214555 109656342 109656341 109656410 69 TTTTACTCTCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGTTTCCCTC chr4 - 94230402 77850743 77850742 77850811 16379592 16379591 16379660 69 TTGTGTTCTTCCCTTATTTCTCCTTCTTTCCTATTTTGTTTTTCATTTTTTGGGGACAAGGTTCTTCTC ..x.::...::x...x...:.::..:...::.x....x.....:x........:....:....:::... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 31805599 NA +3027 chr4 + 190214555 109668667 109668666 109668718 52 TATTTGCTACTGTTTTCTATTTGTTGCCACTGTTTTTTTTTTTCCTGTTTTT chr4 - 94230402 67801520 67801519 67801571 26428832 26428831 26428883 52 TATTTGCTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT ........::......x.xx.......::...x..........::.x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 41867147 NA +9608 chr4 + 190214555 109682571 109682570 109682762 192 TCTTTTCTCAGAAAAACCAAGTAATGAGCACACTGCTGAGATGGAACACATGAAATCTTTGGTTCACAGACTATTTACAATCTTGCATTTAGAAGAGTCTCAGAAAAAGAGAGAGCACCATTTACTGGAGAAAATTGACCACCTGAAGGAACAGCTGCAGCCCCTTGAACAGGTTAGGAAGCATCACGGTTG chr4 - 94230402 34500102 34500101 34500293 59730110 59730109 59730301 192 TTTCTCTTCAGATAAGCTGAGTAGTGAGCATGCTACTGAAATGGAAGATATCAAATCCTTGGTTCACAGACTGTTTGTGGCTCTGCATTTAGAAGATCACCAGATCAAGAAAGAGAGAGAATTGCTACAGAAACTGGACCACCTGAAAGAACAGCTGATGCCTCTTGAACAGGTTGGAAGGGAGGGAGGTTG .:.:.::.....x..:.::....:......::..:....:......x.:..x.....:..............:...:::::::.............x:x:....xx....:....x:xx.x..:..:x.....x.x...........:.........xx...:............:.:.:.x.xx:x..... 192M 138/192 71.9% 192/94230402 0.0% 0/192 0.0% 75182469 NA +10460 chr4 + 190214555 109684389 109684388 109684650 262 CCCTTTAGTTGGTGTATTTGTAAACAGAATTAACAGTTTTTCATTCCCCCTCAGGTGAAAGCTGGAATAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGGATTGGCACTGCTGTCCATTCAGGGTGGGGCACTGGCCTGGCTCACGTGGTGGGTGTACTCCTGGGATATCATGGAGCCAGTTACATACTTCATCACATTTGCAAATTCTATGGTCTTTTTTGCATACTTTATAGTCACTCGACAGGTGA chr4 - 94230402 34501084 34501083 34501345 59729058 59729057 59729319 262 CTCCTCAACTAATGTTTGTTTGAACAAATTCCTGTATTTATTTCTTCACCCTAGATGAAAGCCAGAATTATGGACAGTGCTGATGCAAAGACCTCCAGGCTTCTATGGGTTGGTTTAGCTTTGATGTCAACACAAGGTGGAGCGTTGGCGTGGCTCACGTGGTGGGTCTATTCGTGGGACATCATGGAGCCGGTCACATACTTCATCACCTATGGGAGCGCTATGGCTTTCTATGCCTACTTTGTTCTTACTAAACAGGTGA .:.:.:.::.::...x.x.x.:....:.x.:xxxx:...x.:x:.:.x..::..:.......::....x:x:.x:x:.x.x..x..x..:...xx::.:..:..:....:...x..:..x:..x....x.:x..:.....:..::....x.................x..:..x.....:...........:..:..............x.x..x:.::x......::..:.x...x......:.xx.:...x:........ 262M 174/262 66.4% 262/94230402 0.0% 0/262 0.0% 75183305 NA +6866 chr4 + 190214555 109685234 109685233 109685371 138 CTCTCTTTTTTTTTAAGGATTATACTTACTCAGCTGTTAAGAGTAGGCAATTTCTTCAGTTCTTCCACAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGTAT chr4 - 94230402 34502537 34502536 34502674 59727729 59727728 59727866 138 CTTTCTTTCTTCACTAGGACTATGTTTACCCTGATGCTAAAGACAGGCAACTCCTCCACTACTTCTACCGGAAATCCAAAGCCCAGCATTTTAATGTGGAACAATATAACAAGCTAAAAGAAGAACTTGCGGAGGTAT ..:.....:..:x:x....:...::....:.x.x..:...::::......:.:..:..x.x....:..x:......x..:xxx.....:...:.....x.:.....:......:..........x.....x:...... 138M 99/138 71.7% 138/94230402 0.0% 0/138 0.0% 75182697 NA +3046 chr4 + 190214555 109687493 109687492 109687626 134 CTTTTTCTTTTTCCCATGACAGGCTAAAGAATCCCTGAAACAGGCGCGTCATTCTCTCTGTTTGCAAATGCAAGTAGAAGAACTCAATGAAAAGAATTAATCTTACAGTTTTAAATGTCGTCAGATTTTCCATT chr4 - 94230402 34503388 34503387 34503518 59726885 59726884 59727015 131 CTCACTCTTTCTCCCACTGCAGGCAGAAGAATCTCTGAAGCGTTTGCGCCAGGCTCTGCACCTCAGACTTCCAATCCAAGAAATTACTAACAAGGACTGACTTT---GTTTTGGTATATGTTAGAATTGCCTTT ..:x:.....:.....:x:.....x:.......:.....:.:xx:...:..xx....x::::.xx:.x.x.x.:.xx.....x.:.x.:.x...:.:.:.::..---.....::xxxx:..:...x..x..x.. 104M3D27M 78/131 59.5% 131/94230402 0.0% 3/131 2.3% 75184105 NA +3969 chr4 + 190214555 109689051 109689050 109689133 83 CCGCAGCCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTGCAGGCATGCGCCGCCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .::.....:xx.x..:.............x...x.xx.x.........:...........:.:.:..--.:...:..:.::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 91491925 NA +14155 chr4 + 190214555 109689331 109689330 109689590 260 TAATTAGATTTTGGAAAGAAATGCAGCTTTTTAGTTAGCATTGAGGCAAAACAGGGAACCTGCTTCTTTCCAATTGCACTTGGGTCTTTGCAAAAGTCCACTCGGCGCTGAGAAACTTTCCTGTTCACCAGTGTGAGGAGTTCTGTGAACTCTAAGGAGGAGCCATATTTTCCCAACATCTCACACAAATCTTGAATGTACCATGAGCCGTTCACAGTTTCCCGGTGAGAATAATATCCTA---AAAAAGTGAGAAGGAAAAT chr4 - 94230402 34505237 34505236 34505499 59724904 59724903 59725166 263 TACTTAGATTTTGGATGAAAATACAATTTTTTCGTCAACATTGAAGCAAAGCAAGGAATCTGTTTTTTTCCTATAGCATTTATATCTCTGCATATATCCACTTTGCGATGAGAAACTTTTCTGTTAACGACAGTAAGAAGTTCTGTGAACTCCAAGGAAGAGCCGTGCTTCCCGAGAGCCTCGCACAAATCTTGGATGTACCAGGAGCCGTTTACAGTTTCACGGTGAGAAAAGTAACCTATTGTAGAACAGGGAAATAAAAT ..x............x::....:..::.....x..:.:......:.....:..:....:...:..:.....x..x...:..:x:...:....x.x:......:x...x...........:.....x..x.xx..:..:..............:.....:.....:.::..:..x.:x::...:...........:........x........:........x.........x.:..x....---x.:..xx.:...:x..... 241M3I19M 198/260 76.2% 263/94230402 0.0% 3/260 1.2% 75184094 NA +10132 chr4 + 190214555 109694519 109694518 109694679 161 TCTTACCTGAATGATAAATATCTTGGGTTTTCCAACCAGGCTGTGACACTTGTCTCCTTTGAACAAGCCAGTTAATGTCTGAATTTCGATTTTAGCATCATATGCATAAATGTGATTGCCTTCGCCATGGCTCAGGAAGACACACACAAAGCAATCGGCAT chr4 - 94230402 34506895 34506894 34507055 59723348 59723347 59723508 161 TCTTACCTGAATTATAAATATCTTTGGCTTTCCTACCAGACTCTGGCACTTGTCTCCTCTGAACATGTTCGTGATTGTCTCAATTTTGATTTGGGCATCATATGCGTAGACATGATCGTTTTCACCATGACTCAAGAACACACAAACAAAGCAGTCAGCAT ............x...........x..:.....x.....:..x..:............:......x.::x..x.x.....x.....:.....x:...........:..:.::....:.::...:.....:....:...x.....x........:..:.... 161M 129/161 80.1% 161/94230402 0.0% 0/161 0.0% 75187624 NA +8670 chr4 + 190214555 109697619 109697618 109697773 155 TACCTGCGGGTAAGATTGTCTCTATCTGCGCAGGTGCCCCGCCTTTCTGGCAGTGTTAAGTGCCAAAAGAACCTCTCATGATTGAAGATTAAAGCAATTCCTCTCCTCCTGTGGTCCATTTTGTACTTTTCTGCCGGATCAAACATTTCTCTGTT chr4 - 94230402 34508028 34508027 34508182 59722221 59722220 59722375 155 TACCTGCGTTTCAGATTGTTTCTGTCTGCCAAAGTCCCACGTCTATCTGGCAGCCTTAAATGCCAAAAAAAGTGCTCGTGATTGAAGATTAACGCAACTCCTCTTCTCTGATGGTTCATTTTGTATTGCACTGCAGGGTCAAATGTTTGTCTGTT ........xx.x.......:...:.....xx.:..x..x..:..x........:x....:........:..x:x...:..............x....:......:...:x:....:.........:.x:x....x..:.....::...x...... 155M 119/155 76.8% 155/94230402 0.0% 0/155 0.0% 75189591 NA +3043 chr4 + 190214555 109705970 109705969 109706016 47 TCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATA chr4 - 94230402 15328148 15328147 15328194 78902209 78902208 78902255 47 TCTTTTAAAACAAAGAAGAAAGTAAAAAAAAAATATGTATGTATATA .....x....x...:..:...:x.............:...:...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 94377822 NA +3833 chr4 + 190214555 109705975 109705974 109706040 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAATATATAT chr4 - 94230402 72897609 72897608 72897674 21332729 21332728 21332794 66 aaaaaaaacaTAAAAAATAAGAAAATAATATATATGTGTGTATATATATATAAATCTCATATTTAT ........x.x......x..:....x.........:.:.:............x..x.x....x... 66M 54/66 81.8% 66/94230402 0.0% 0/66 0.0% 36808366 NA +3989 chr4 + 190214555 109706110 109706109 109706239 130 AGGACAACATACCTATCCATTTTATATATATATATATATATATATATATATATATATATATACACACACACATATACACACACACATACATTATACATAGGTATATGCATATATCTCCACATTAACAGGA chr4 - 94230402 88147151 88147150 88147269 6083134 6083133 6083252 119 AGGACACTAAACCTTTTTTTTTTTTTTTT-TACATGTAAGAATATATATATATATGTTTGTG----------TATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTACATCAGAA ......x:.x....x.::x....x.x.x.-..:..:..x:x..............:.x.:.:----------...:.:........:...::...:.....x.x.x.........xx...xx:.x...:. 29M1D32M10D58M 84/119 70.6% 119/94230402 0.0% 11/119 9.2% 21558959 NA +3013 chr4 + 190214555 109706133 109706132 109706195 63 ATATATATATATATATATATATATATATATATATATATACACACACACATATACACACACACA chr4 - 94230402 14964821 14964820 14964883 79265520 79265519 79265582 63 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.x....:.x.:::.:.::.:.::.:...:......:.xx.........::........... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 94741312 NA +3173 chr4 + 190214555 109706133 109706132 109706198 66 ATATATATATATATATATATATATATATATATATATATACACACACACATATACACACACACATAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:........xx......:..:..........:.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 94741314 NA +7194 chr4 + 190214555 109714368 109714367 109714509 142 GCATCTCCTTTAAAGATCAGTTTTTTCTTCATAATGACACCTGCATGCGGCTCGTTGGCTGTCCAGATATGGTTTACAACCTAAATGTATAACACTGTCAAACAAGAGCTCCACTGTTGTTTCACATGCTGCAAAACAAGAA chr4 - 94230402 34518473 34518472 34518614 59711789 59711788 59711930 142 GCATGCCTTTCAGAGATCCGTCTTATCCTCATAGCGACACATACATGAAGCTCTCTGGCTGTCAAGGTACGGCTTACATCCTAAGTGTATAACTGCATCAAACAACAGCTGAACAATTGATTCACAAGCTGCAAGCAAAGAA ....x:.:..:.:.....x..:..x..:.....::.....x.:....x:....x:........x..:..:..:.....x.....:........xx::........x....xx..x:...x......x.......:xx..... 142M 105/142 73.9% 142/94230402 0.0% 0/142 0.0% 75195895 NA +10558 chr4 + 190214555 109717543 109717542 109717716 174 CTTACCCTGAACATGCTGAGTTAGTCCTAGTGTTTTCTGTACATCTCGGCAGATCTTGGAGAGGCAATACTGGAATTCTTCATCACAGTCATTCTTGCTTTTGCCACAGGTCTCATAGCACCTGTCGTGTTGGTTGCAACACTTTGTCAGGGAAGGGATACCAATGTTAAGCTG chr4 - 94230402 34519885 34519884 34520058 59710345 59710344 59710518 174 CTTACCCTGTACATTCTCTGATATTCCAAGTGTTTTCTGCACATCTCTGCAGATTTTGGAGAGGCAGGACTGAAATTGCTCATCACAGTCGTTTTTTTTATTGCCACAAGTATCATAACATCTATCATGGTGATTGCAGCACTTTGTCATCAGAGGGATACCAACGTCAAACTG .........x....x..xx.x..x...x...........:.......x......:...........:x....:....x:...........:..:..x:.x........:..x.....:..:..:..:..x..:.....:..........xx::...........:..:..:... 174M 138/174 79.3% 174/94230402 0.0% 0/174 0.0% 75197658 NA +3396 chr4 + 190214555 109720553 109720552 109720662 110 TGATGAGACTCTGTCTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT---ATATATATATGAATTTTAAAAAAATAAA chr4 - 94230402 59607247 59607246 59607359 34623044 34623043 34623156 113 TGAAAAAACAATGCCTAATATTAAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAAAATCTGTTTTTTTTTTTTAAAGGAATAAA ...x:.:..xx..:..:xxx.:....::.....xxxx:.x.:.......:....:.:......:......xx.........x---..x.:.x.x.xxx.......::...... 82M3I28M 74/110 67.3% 113/94230402 0.0% 3/110 2.7% 50113306 NA +3022 chr4 + 190214555 109720564 109720563 109720618 55 TGTCTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATAT chr4 - 94230402 42031216 42031215 42031270 52199133 52199132 52199187 55 TGTCTGTCTTCAAAAAGAATAAAAGAAAAAGACAGCAAAAGATGTGTATTTATGT .......x........:..x....:.....:.x.:x....:..:.:...x...:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 67689348 NA +3396 chr4 + 190214555 109720567 109720566 109720651 85 CTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATGAATTTT chr4 - 94230402 37024472 37024471 37024556 57205847 57205846 57205931 85 CTGAATTTAAAAAAAAAAATGAAAGAAAAGAAAAAGAAACACGAAAATGTTCATATATGTTCATACGCTCACAGAAATAGGTTTT ...x...:...........x:...:....:.....:...:.::x.x..:.x:......:.x:...:::x:.:.x.x..:::.... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 72696095 NA +3601 chr4 + 190214555 109720572 109720571 109720647 76 TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATGAA chr4 - 94230402 86407066 86407065 86407141 7823262 7823261 7823337 76 TTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTAAA ......:x..............:..x...:..xx.xx.x..x.x:.:.x......:.:.........:...:.:.. 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 23313506 NA +3017 chr4 + 190214555 109720588 109720587 109720626 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 40282849 NA +10447 chr4 + 190214555 109729597 109729596 109730035 439 CTCACCGTCACTGCATTTATACTGGCAGAGACCGTCCTCGCCTCCCAGGAGGTCCAAGGCGGCGTTCAGGTACGTGTCTATCTTATGAACGCCGTTCCGGATGGTCTTCAGGGTGGCTCTCCAGTCGGTGGTCTGGGCCTGCTCCTGGCACCTGAC------------------------AACAGCGGCCATGAGGAGGAGCAGGAGGGTGAGCGCGGGGCGCGAGAGCAGGGCCATGCGCGCAGCGCCGGGCTCTACGGGTCCCCGAGCCGCGGCGCGGGGCGCGTCCCCACAGAGTCCCCAGGACGCGCTAGGCAGCGGCGCGGGCCCCGGACTTGGCAGCAGCCAGCTCCATATCCACGCCTCCTTCCCGGCTGGCCCTCAGGATCTCGCTGTCTTTACG--TGAACCG--CCTCGGGCAGGCAGCGCCGTCGCGGGGAC--------GCGCCCGCTCACCTGGACCAGCGC chr4 - 94230402 34521655 34521654 34522067 59708336 59708335 59708748 413 CTCACCGTCGCTGCATTTGTACTGGCAGAGGCCGTCCTCGCCGCCCAGGAGGTCGAGCGCCGCGTTGAGGTAAACGTCGATCTTGTGCACGCCGTTCCGGATAGTTTTCATCGTCATCCTCCAGTCTGGGGTCTGCGGCGCCTCCTGGCTccgggccgccggcggccgcgggcccACCCAGGCACCCGCCATCAGCAGCGGCAGCAGCA-----GCAGGGCGC-------GGGCCATGCCCGAGGAgccgcgcc---------------ccgcgccgccgggcg----ctcgctaagccccc--gccgcgc--ggccgcagc----gctccgcac---gca-cggcccggcccgc-----cgccatcggccccgcggg------------cgccgccccTACGGCTGGGCGGGACTGCGAGCAGGGCGCGGCCTGTTGGAGAAGGCGGCCGGCGTCCGCT--CCTGGCCCGGCGC .........:........:...........:...........x...........x.:x..x.....x.....x::...x.....:..x..............:..:....xx..x:::........x.x......x.x.xx........x..x.:.------------------------::..x.x.....x..x..x:....x..x:-----..:......-------.........x..x:.x....x..:---------------.....x...x.....----.:.:.x:..:....--.x.....--...x..:..----..:...x..---...-.:...x.x:..::-----....x:.xx...x..x..------------...:.:.::....--..::.x.--.:x..:.....xx...x.x.xx:..:..x--------...:.....--.....x..:.... 156M24I29M5D9M7D24M15D15M4D14M2D7M2D9M4D9M3D3M1D13M5D18M12D13M2I7M2I29M8I9M2D13M 281/377 74.5% 413/94230402 0.0% 98/377 26.0% 75207942 NA +3192 chr4 + 190214555 109740361 109740360 109740506 146 AGAAGGAAAGAGAGAAAAGATGAGAAAGAAATAAAGAGGAAGCAGGGAAATGGGACAAGAGCTGTGAAGTCAGTTATTACCCTGTGACAGGTACTATGCCAAACATTTATGTAAGTATGTAGTTTCATTTTCACAGAATTCCAGTT chr4 - 94230402 63446791 63446790 63446914 30783489 30783488 30783612 124 AAAAGAAAAGAAGGAAAAGCTTGCAAAGAAATAGGGAGGAAGCAGAGAACAGGTGCA--AGCTG-------AGTAAATGTTCTGTG---------TTCTTATATGTGTATGTGTGTATGAGGT----GTGTAACAGTATTTCAGTT .:...:.....::......x.x:x.........::..........:...xx..x:..--.....-------...x.x.:::.....---------x.x::.x.::.x.....:x.....x:..----x.x.x....x...:..... 57M2D5M7D15M9D28M4D19M 87/124 70.2% 124/94230402 0.0% 22/124 17.7% 46293570 NA +12189 chr4 + 190214555 109740889 109740888 109741139 251 AATTTTATACATTGTACTGAGAAATAAAAGGCCTTCCTACATGGTAGCTAATCCAGTCAAAATAATTGGCCACTTTGGTGTAAACACCTGGGAACTCTGGTTTTCCACAGTTTTCCCCCCAACTCACAACACCCCAGACATAAGTCACATTGTTGGCATCCATACAGACTAAGGGGCCTCCAGAGTCCCCTTTACAGGCATCGATGGAACCATCATATGTACCTAAGAAAGAAATGTGAAAGAGAAAATCA chr4 - 94230402 34523859 34523858 34524109 59706294 59706293 59706544 251 AGCTTCAGATATTATACCGTGAAATGAGACTCCTTGACACATGGTGGCTAATCCAGTCGTAATAGCTGGCTACTTGTGTGTAGACGCCGGGGTGACCGGCCTCCCCACAGTTTTCACCCCAACTCACAACACCCCAGACATAAGCCACATTTTCTGCATCAAAGCAAACCAGGGGACCTCCTGAATCACCTTTGCAGCTGTCAATGGAGCCATCGTAAGTACCTGCGGCAAAAGAGGGTGGGGGAACAACA .::..:.x.:...:...:.x.....:.:.xx....xx:.......:............:x....::....:....xx.....:..:..x...x:x:.x.x:.::...........x............................:......x.:x.....x.x:..:..:.:...:.....x..:..x.....:...x::..:.....:.....:..x......:x.:x.:..:x.x.x::.:...x.x.. 251M 179/251 71.3% 251/94230402 0.0% 0/251 0.0% 75217030 NA +7108 chr4 + 190214555 109746210 109746209 109746536 327 TAAAACATATACCTTTTTCTCGTCCCCAGCCAGAAACGATGCATGTATCATTAGGTTGGAATAGGTAAGGAGACCAGGGGACACAGGCAGGGATGGAACGAGGCAGCTCACAATCTTTTTTGTTTCCGTCTTTTTTCATTTCAATCAAAGCGATGTCATTTTGGTAAGTGCCTGCATTGTAGTTTTCATGGAAAATAATTCTATCCACGTATTCAATTACTATACGTTTAAGGTCGGGGTGTATCCAGTCTACTACTGTTGTCCATATTTGGTAACGATGAGTTTTACTGGCTCTATAACAGAAAAAAAAAGGAAATAAAATATATT chr4 - 94230402 34527193 34527192 34527506 59702897 59702896 59703210 314 TGAATCAAATACCTTTCTCTAGTCCCCATCCAGAAACCTTGCATTTATCGCCAGCCTTGAACATATGCTCTGACCAGGGGACGCAGGCAGGTGTGCTGTATTTCAAGGAGCACTCTCCT---TTTCCATGACCTTTCAGCTCCAGCAGAGCGATGTCATTTTCATAAGTTGCAGCATCATACTTCTCATGGATTATCAGTTGCTTTAGTCTGTAAGTGTCTGTCTCTCT---GTCATACTGTATTGTATCCAACAGCCCAATCCAGACACGGTATTGATGAACTCGAGTTGCTCT-------GGAAAAGGAGCCAATGAAATATGTT .:..x..x........:...x.......x........xx.....x....:::..x:.x...:.x:.:xxxx...........:........x:..xx:::xxx..:xxx:..x...::.---.....:.xx::.....x:..x.x..:..............x:.....xx.x....::..x..:.......xx..x.x.:xx.::.xx:xx.x.:.xx..:.x:x.:.---...:x:x.....:xx:..:.x:.x:x:x:....x.:x:....x:.....::.:x.x.x.....-------::....::..xx...:......:.. 119M3D107M3D63M7D25M 193/314 61.5% 314/94230402 0.0% 13/314 4.1% 75219017 NA +6797 chr4 + 190214555 109749211 109749210 109749329 119 CTTTTACCTGAGACAATGTGCAGCAGTCAGAATCCAACAGCCACCAATATAAATTCCCCCACAG---------GTGATTCCACTGGCA---TCCTTAATTGCCACCTGCCATGGGAGGTCTCCCTGTAAAA chr4 - 94230402 34528105 34528104 34528235 59702168 59702167 59702298 131 CTTTTACCTGACACAGTGTGCAGCAGTCAGAACCCAACAGCCACCAATATAAACCCCTCCACAGTACACTGTTGCACCTTCAGTGCCAGTGTCTTTAATTGCCACTTGCCAAGGGAATTCACCCTATTAAA ...........x...:................:....................::..:......---------.::x:.:..x..x..---..:...........:.....x....:x..x....:.x... 64M9I15M3I40M 98/119 82.4% 131/94230402 0.0% 12/119 10.1% 75221106 NA +3057 chr4 + 190214555 109756892 109756891 109756974 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 72898598 NA +3057 chr4 + 190214555 109756896 109756895 109756978 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 72898602 NA +4289 chr4 + 190214555 109760268 109760267 109760394 127 ACCTGCACAG------CCAACTTCATCTTCCCCTGTAATGCAGTCCACCTCACCATTGCATTGATACTGGCTTGGAATGCAAACACCCGATTTGCAATGGAAGCCTTTGCCTTGGCATGCTGTGCAAACATAA chr4 - 94230402 34530641 34530640 34530770 59699633 59699632 59699762 130 ACCTGAACAGAGAGCTTGAGCTTCATCCTCTCCTGTTAGGCAGTCAACTTCTTTGTTACACACATTCTTATTTGGAATACAGATATTTGATCGACAGTGGAAACTGTTGTTTCTGCATTCTGT---AATATAA .....x....------:x.:.......:..:.....x.x......x..:..x:::..:..:xx..x..x::.......:..:.:.:::...:x:..:.....:.:x...::.:x....x....---..:.... 10M6I107M3D7M 83/124 66.9% 130/94230402 0.0% 9/124 7.3% 75229627 NA +6712 chr4 + 190214555 109760490 109760489 109760649 160 TTTAGAGGATTTAGAGGCTAGATTTATGTCTACCTTTACAACACAGTTCATCACTTTGGTCTCCACAATCATTGATACCATCACAGGCTTTCATCTGAGAAATGTATTTCCCATTCACACACTGAAAGAAGTCATCCATTGGAGAATCTGTAAAGCAGGA chr4 - 94230402 34531409 34531408 34531561 59698842 59698841 59698994 153 TTTAAACAGCTGAGAGAATAAACTA----TTACCTTTACAACACAGTTCATCACTTAAGTCTCCGCAGTCATTTATACCGTCACAGGTTTTAGTCACAGAAATGCACTTGTCATTTGCACAATG---GAACTCACCAGCTGAACATTCTGTACAGTGAGA ....:.x:::.x....:x..:.:.x----:..........................x:......:..:.....x.....:.......:...x:..xx.......:.:..x:....::....x..---...x...:.x::..:.x.x......x..:::.. 25M4D95M3D33M 111/153 72.5% 153/94230402 0.0% 7/153 4.6% 75229081 NA +9669 chr4 + 190214555 109766547 109766546 109766790 244 TTGCTACCTTCGGCTGTGCATGTTCCGTTATTTAAAAACTTTGTCCCTGGATGAAGACATTCCAAACTCTTTTGTTGACAGTATGTTGGGAAGCTTCTCCTGTTAGTTGCACACACTGCAGTGCCATTCTTTGGGCACTGATACGGTAGTTTACAAACACAGGTGCCCTCAATGCATCTCTGCCATGGCTGGCAGAAGACTTTATCGCAGGAGAGGTGAGTATATTTTTTTGCTAAGCACTTTT chr4 - 94230402 34534131 34534130 34534374 59696029 59696028 59696272 244 TTAATACCTGTGGACATGCATTTTCCCTTGTTCAGAAACTTTGCTTCGGAACGTTGACACTCAAAGCTCTTTAGGTGGCAATAAGTATAAAAGTTCTTTCCAGTGGTAGAACAAACTGAAGTGCCGTTCTTTGGACACTGGTAGGGAAGCTTACAGAGGCATTTTCCCTCCACACATCGTTCCCATGGGTGACAAAAAACTTTCTTACAGGACTTGTGTGTGTATTTGTTGCTTAAACATTCTT ..:x.....x:..x::.....x....x..:..:.:........:::.x.:.:.xx....:..x..:......x.x..:..:..x..xx::...:.::.:.::x.:..x.x...x....x......:........:.....:..x..x..:.....:.x:..xx.x.....x.::....x:.x......x..:..:..:.....x.::.....xxx...x..:.....x..xx:...:..:.:.. 244M 163/244 66.8% 244/94230402 0.0% 0/244 0.0% 75232416 NA +3192 chr4 + 190214555 109808323 109808322 109808379 57 TTCTTGAAGGAGGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAACCTGAAAAC chr4 - 94230402 42895006 42895005 42895060 51335343 51335342 51335397 55 TTTTTGAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAA--TGAGAAC ..:.....:.......:..:.....:.........:.x..::.:....--...:... 48M2D7M 44/55 80.0% 55/94230402 0.0% 2/55 3.6% 66913317 NA +3080 chr4 + 190214555 109813634 109813633 109813701 68 TGACTGTAGATATAAGATGAAATGTACTTATTTGTGTTTCTCCTTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 80178018 80178017 80178085 14052318 14052317 14052385 68 TAATTCTGAAGATGATAAGAAATGTATTTTCTGCTGTTTCATCTTTTTTTTTTTCTTTTTTTCTCTTT .:.:.x.::.x..:.x.x........:..x:.xx......x:...:........:.......:.:... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 29635616 NA +11069 chr4 + 190214555 109817918 109817917 109818098 181 TTTCTTGTCCT--GTTTCAGTATTAGGAGAGTTCCTGCATCCCTGTGAAGATGACATAGTTTGTAAATGTACCACAGATGAAAATAAGGTGCCTTATTTCAATGCTCCTGTTTACTTAGAAAACAAAGAACAAATTGGAAAAGTGGATGAAATATTTGGACAACTCAGAGATTTTGTATCCTT chr4 - 94230402 34537946 34537945 34538128 59692275 59692274 59692457 183 TTGTTTGTTCTTTATTTCAGTACTGGGGGAGTTCATGCATCCGTGTGAAGATGATCTCGTTTGTAAATGTAAAACAGAAGAAAACAAAGTGCCTTATTTCAACGCACCAGTATACTTGGATAATAAGGAACAGATTGGCAAAGTGGATGAAATCTTTGGGCAGCTACGAGACTTTGTATCCTT ..x:....:..--:........:.:..:......x.......x...........:x.x.............xx.....x.....:..:..............:..x..x..x.....:..x..:..:.....:.....x..............x.....:..:..xx....:........... 11M2I170M 148/181 81.8% 183/94230402 0.0% 2/181 1.1% 75279972 NA +3096 chr4 + 190214555 109818427 109818426 109818506 80 TCCTTCCTTTCTCTCTCTCTCTTTTTCTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCTCTCTCTTTCTTTCTCTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...:.:x.x.:.:x..:.....xx.:..x...:.:........:....:...:...x...x.xx:..:.x:..:..x... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 90829610 NA +3011 chr4 + 190214555 109818521 109818520 109818580 60 GCCTTCTTCCCTCCCTCCCTTCCTCCCTTCCTTCCTTTCTTTTTTCCTTTTTTTTTTTTT chr4 - 94230402 40645447 40645446 40645506 53584897 53584896 53584956 60 GCCTTGTCTTCTTCAGCCTTTTCTGCCTTTCTTGTTTGTTTTGTTCCTTTTTTTTTTTTT .....x.:::..:.xx..:..:..x....:...x:..x:...x................. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 69173074 NA +3809 chr4 + 190214555 109818640 109818639 109818722 83 CTACAACCTCCGCCTCCTGGGTTCGAGCAATTCTCGTGCCTCAGCCTTTCAAGTAGCTGAGATTACAGGTGAGCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCACTGTG .....:..:xx:x..:........:..::x...x.:x.x....................::.:....x..--..:....::.. 70M2D11M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 91621514 NA +5553 chr4 + 190214555 109818824 109818823 109819074 251 CGAAGTGCTGGGTTTGCAGGTGTGAG--CCACCACGCCCAG---CCCCTGGAAATTCATTTCTTATCTTTCCTATATATATCCATACATTCTAACCTTGTTTTTGAAATTATACATGAATTCAGAA-------------------------CATTTGATA---------TCATCTTTCATC--TTAATTGCTCATTTGTTCCTTAATGAAAATAATAGTATTTTTCAGTTAAGTTGTCAGAAAACATGAAGGCTTCATCCTTTAAAAAACTACAGAAGGTGAGTCAAACTTA chr4 - 94230402 34538738 34538737 34539022 59691381 59691380 59691665 285 CAAAATGCTGTCTTTGTAACTGTGAGGAAAATTAGAAACAGTTACTCCTGATCATTAAGTTGTAATTTTTC--ATTTGTAGTGATGATGTTTAGCTTCATTTAAAAAAT-----ATGAATTTAGAAAAGGTCTAAAGCATCTAAATTCACCCATGTGATAATCAAAAGTGCAACTTCTAACATTTTATTCCTGGTGTGTTCCTTAAAGAAGCTAACAGTATTTTTCAGTGAAGCTGTCTGAGAACATGAGAGCCTCTTCATTCAAAAAAATGCAAAAGGTTAGCTGGTCTCA .:..:.....xx....:.:x......--xx.::.x:xx...---.:....:xx...x.x..x.x..:....--..x.:..x:x..:xxx.:..:.:.::...xx:....-----.......:....-------------------------...x.....---------x..x...::.x.--..x...x..x:.x..........x...:x...:.............x...:....x..:.......::..:..x..x..:......x.:..:.....x..::::x..:. 26M2I13M3I27M2D36M5D12M25I9M9I12M2I109M 167/244 68.4% 285/94230402 0.0% 48/244 19.7% 75280086 NA +6765 chr4 + 190214555 109827727 109827726 109828143 417 GGATGTGTGTGCTTGATAATCTCCTTAGATAGAAGACTGATGCCCAAATA----GGTTAAAATGTGTGGTGCTTGGTATTTCTTTTTGTTTTG-CTAATAAGCTTTTCCCT----TATTCTGGGAAT-TAAAGTCCTTTCCTCTTTAGCCCAATTAAAT-----TTGTTAAGGGAGGGCCTCTATGAAAAGGC------------CCTTCTTTGAGGTCTCTAAGTGGAAATGATTGGTCCTAAAAAATCTTTCCTCAGTAGCTCATAAAGCAGTTCATAATTATCGAAGGCTTATTATGAAGGGT--GTTTCGGTATCTTCCCTCCAAAATGCTAAGAAATAATTTAGGCAACAGTTCAGACTCTAAAAATGAAGATGGCTCGGTCTTTTCACAGACTGAACACAATATTGTTGCAACTTACTTGATTATGGCAGGTATGGATAT chr4 - 94230402 34545333 34545332 34545772 59684631 59684630 59685070 440 GGGGGCATGTGACCGTTAATCTCTTTAGCAGTAAGAATAAAGTTTAAGCATCCTGTTGGAAATGTACTCGGTTCTGTGTTGCTCTTTGTTTCAATTAACAAGCTTTTCTCCCGCATAGTCCGGGGGTATAAACTTCTTTGCGCTCT-GTCCAATTAGGTCATGCTTGGAAGCTGTCAGCGCTGATGGTGAGGCAACCGTCCCCTGCCTCTTTTTCAGTTGTTCAGT----CTGTTGGATAATGAAAGAATTTGCCTGACGGGGTTTGGTAGTGTTTTGTCCTC-TAGATGAATTACTGCAAGATATAGGCGACAGTCTCGTGCGTCCAAAATGCATTGGAATGATTCAGCCAACTCCTCCGAAAGTGATGCTGAAGCTCATTCTGTCTTTACACAGACTGAGCACAACATAGTCGCAGCTTACTTAATAACAGCAGGTATGGGCAT ..:x.::....x::.x.......:....xx:x....x.:.x.:::..::.----.x.x:......::xxx.:.:x..:..x..:.......::-:...:.........:.:----..x..:...::.-....x.:....x.x..:.-.:.......::.-----...xx.:xx.xx:..x::x...:x:....------------...::...xx:..:x:.x...----x..x.x.:.xx.:...:.x:..x...x.xx:.x.:xx:x..::x..::.xx.:-.x..x.:x...:.:::.::x:.--.:xx.:..x..x.x.x..........xxx.:...:...:..x....xx:..x..xxx.:.x:x.....x.x::..x......x..........:.....:..x..:...:.......:..x.::..........::.. 50M4I39M1I17M4I12M1I18M1D12M5I29M12I21M4D53M1D22M2I138M 250/411 60.8% 440/94230402 0.0% 35/411 8.5% 75282394 NA +13348 chr4 + 190214555 109833120 109833119 109833335 216 TTTTTGTGTGTGTTCTCAGGTATGATAAGTATTATCAGCAACATAATAGTTCTGGGCATCTTCATTAAGTACAAGGAACTTCGGACACCCACAAATGCAATTATTATTAACCTGGCTGTTACTGATATAGGGGTCAGTAGCATTGGCTATCCCATGTCTGCTGCCTCAGATCTGTATGGAAGTTGGAAATTTGGATACGCAGGCTGTCAGGTATTG chr4 - 94230402 34550309 34550308 34550524 59679879 59679878 59680094 216 TTCTTTTCTGTTTCCACAGGAGTGATAAGCATTTTCAGCAATATTGTTGTGTTAGGCATCTTTGTGAAGTACAAAGAGCTTCGGACAGCAACCAATGCAATTATTATCAACCTGGCTTTCACTGACATTGGTGTTAGTGGCATTGGCTACCCCATGTCTGCTGCTTCAGACCTGCATGGAAGCTGGAAGTTTGGATATACTGGATGCCAGGTATTG ..:..x.x...x.:.x....x:.......:...x.......:..x:.x..x:.:........::.x........:..:.........x.x..x..............:.........x.:.....:..x..x..:...:..........:..............:.....:...:.......:.....:........::.x..x..:......... 216M 172/216 79.6% 216/94230402 0.0% 0/216 0.0% 75282811 NA +6556 chr4 + 190214555 109835354 109835353 109835469 116 TTTGGTTTTCAGGTTTATGCTGGATTGAATATTTTTTTTGGAATGGCAAGCATTGGATTACTCACGGTCGTGGCTGTGGACCGATACCTGACCATCTGCCTTCCTGACGTAGGTAC chr4 - 94230402 34552161 34552160 34552276 59678127 59678126 59678242 116 TTTTAATTTCAGATCTATGCTGCCTTAAATATATTTTTTGGGATGGCGAGTATTGGTTTGCTCACTGTTGTTGCAGTTGACCGTTACCTGACAATCTGCAGGCCTGACATAGGTAC ...x:x......:.:.......xx..:.....x........:.....:..:.....x..:.....x..:..x..x..x.....x........x......xxx......:....... 116M 91/116 78.4% 116/94230402 0.0% 0/116 0.0% 75283193 NA +8519 chr4 + 190214555 109835992 109835991 109836166 175 TGTGCTTGATAATAGGGAGAAGAATGACCACCAACACTTACATCGGCTTGATTCTGGGAGCCTGGATCAATGGCCTGTTTTGGGCTTTGATGCCTATCATAGGGTGGGCTAGTTATGCCCCAGATCCTACTGGTGCTACGTGTACCATAAACTGGAGGAAAAATGATAGGTAAGA chr4 - 94230402 34552976 34552975 34553150 59677253 59677252 59677427 175 TGTGTTTTGTCACAGGAAGAAGAATGACTACCCGTAACTATGCCGCTCTAATCCTGGCTGCGTGGATCAACGCAGTCTTTTGGGCGTCCATGCCTACTGTAGGCTGGGCTGGCTATGCTCCAGATCCGACTGGAGCAACTTGCACAGTCAATTGGAGGAAAAATGATGTGTAAGA ....:..x:.x.:...:...........:...x::.x:..:::..x::.:..:....xx..x........:.xxx.x........x.:x.......:::....x......:.:.....:........x.....x..x..x..:..x:.x..:...............:x...... 175M 126/175 72.0% 175/94230402 0.0% 0/175 0.0% 75283016 NA +3053 chr4 + 190214555 109836891 109836890 109836938 48 CAAAAAAAAAAAAAAAAAAAAGCAGAGGGTGGTGCGGGGGGTGGGAAA chr4 - 94230402 88558245 88558244 88558292 5672111 5672110 5672158 48 CAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAA ......:.x............:x.:.......x.x.......::.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 21278646 NA +9445 chr4 + 190214555 109837417 109837416 109837608 192 TTGCCTTTTCTTATTTTCAGATCTTTTGTGTCTTACACCATGACAGTTATTGCGATAAATTTTATTGTGCCCTTGACAGTGATGTTTTACTGCTATTACCATGTCACGCTATCCATTAAACATCACACTACCAGTGACTGCACTGAGTCCCTCAACAGAGACTGGTCAGATCAGATAGATGTAACAAAGGTA chr4 - 94230402 34553507 34553506 34553698 59676705 59676704 59676896 192 TTGTTTTTCTGTCTTATCAGGTCCTTTGTTTCCTACACAATGAGTGTAATTGCTGTTAATTTTGTTGTACCCTTAACAGTCATGTTTTACTGTTATTACAATGTTTCCCGGACAATGAAACAATACACCAGCAGTAACTGCCTGGAGAGCATCAACATGGATTGGTCTGACCAAGTAGATGTAACAAAGGTA ...::...::x.x..x....:..:.....x..:.....x....xx..x.....x:.x......:....:.....:.....x...........:......x....:x.x.x:x.x..x.....x:....:.x....:.....x:x...xx.x......x:..:.....x..:..::................. 192M 142/192 74.0% 192/94230402 0.0% 0/192 0.0% 75283910 NA +13170 chr4 + 190214555 109842458 109842457 109842661 204 TTTCTTTTCAGATGTCTGTGATCATGATCTGCATGTTTCTGGTGGCATGGTCCCCTTATTCCATCGTGTGCTTATGGGCTTCTTTTGGTGACCCAAAGAAGATTCCTCCCCCCATGGCCATCATAGCTCCACTGTTTGCAAAATCTTCTACATTCTATAACCCCTGCATTTATGTGGTTGCTAATAAAAAGTAAGTAATGTCTA chr4 - 94230402 34555351 34555350 34555554 59674849 59674848 59675052 204 TTGTTTTACAGATGTCTGTTGTGATGATTGTCATGTTCCTGGTGGCATGGTCTCCCTATTCCATTGTGTGTTTATGGTCTTCCTTTGGAGACCCAAAGAAAATTTCTCCTGCAATGGCCATCATAGCTCCTTTATTTGCAAAATCCTCCACGTTCTATAATCCCTGCATTTACGTCATTGCAAACAAAAAGTAAGTGTTCTTTA ..x:...x...........x:.x.....:xx......:..............:..:........:.....:......x....:.....x...........:...:....:x.x.................x:.:...........:..:..:........:...........:..x:....x..:...........:x.x.:.. 204M 166/204 81.4% 204/94230402 0.0% 0/204 0.0% 75287107 NA +11160 chr4 + 190214555 109848026 109848025 109848328 303 AGGCTGGATCAATTGATCTCCTGCAAGATACACTTGAAGGTTAAGTAACTACAGATCTCAGCTAATCCCGTGTAATCTGCTGTTACTAAATGGCTGTTTGTATTC-CAGGCATACCAGGTT----CTGAATGCTTAGGATTCGGTTTTTACCTTTTGTTTAAATAACCTCTAAAAGGAGCAATGCATCTCTTTGCATGT----CTGTGCATTGTCCTTAGCTTTTTGGAAGGAGTGGGCTGTTTGTGTCCTTCACAGTGCACCTGTGATTATCACGGCAGAAATGACGGCTCAGGATCAAGGTATGCTCCTC chr4 - 94230402 34558153 34558152 34558461 59671942 59671941 59672250 309 AAGCTGGTTTAGCAGATCCCTTTCAGGATACATTTGAAGGTTAAGCAACTAAAGATCTCAGCTAATCTGATGTAATCTGCTGTTACTAAATGGATGTCTGCATTCACATTCGTAGCATGCTGCACATGCATGTGTATGAATAAAGTCTTCAGTTTTTTTGGTGTCAGTTGTGCAGGGAGGAAGCCATGTCTATGCTTTTTTACTTATACCTCATAATGAGCATTTCTGA---AGTGCGTGGTTTTTGTCCTTCGCAATGCACTTGTGTTTACCATGGCAGAAGTGATGGCACTGGAACAAGGTATGCGTTTC .:.....x.:.::x....:.:.x..:......:............:.....x...............:x:.......................x...:..:....-..xx.:..x..x.:.----x..x...:x..x..x.x::x.:..xxx....x..x:x:.x.x:.x.:x.:....x..xx...x...x...x.x.----:.:.:.x.::.xx.x...x...:x..---....x.:x....x........:..:.....:....x...:..:.......:...:...x.x...x..........x::.. 105M1I15M4I74M4I26M3D80M 212/300 70.7% 309/94230402 0.0% 12/300 4.0% 75289873 NA +21690 chr4 + 190214555 109851492 109851491 109851923 432 TTGTGACACTAGGTTGGTGCTATGTAATGACATGGATATGAACGAGCTGCCTACGAACCTCCCCGTGGACACTGTGAAGCTTCGCATAGAGAAGACTGTCATCCGCAGAATCTCTGCGGAGGCCTTCTATTACCTGGTGGAGCTCCAGTATCTCTGGGTGACTTACAATTCCGTGGCCAGCATTGACCCCAGCAGCTTTTACAACCTGAAGCAACTGCATGAGTTGCGCTTGGATGGGAATTCTCTGGCTGCTTTCCCTTGGGCATCTCTGCTGGACATGCCCCTTCTGAGGACCCTGGACTTGCACAATAACAAAATAACCAGTGTGCCAAATGAGGCGCTCAGGTATCTGAAGAACCTTGCCTACTTGGATTTATCAAGCAACAGACTCACCACATTGCCACCAGATTTCCTGGAGAGCTGGACTCATTT chr4 - 94230402 34559407 34559406 34559838 59670565 59670564 59670996 432 TTCTGGTGCTAGGTCTGTGCTCTGTAATGACCCTGACATGTTTGAGATCCCTGTGAACGTTCCCGTGGATACTGTAAAACTTCGTATAGAAAAAACTGTCATACGAAGGATTCCCACTGAAGCCTTTTACTACCTAGTAGACCTCAAATATCTGTGGGTAACTTACAACTGCGTAGCCAACATTGATATCAGCAGCTTCTATAACCTGAAACAACTGCATGAGCTCCGGCTGGATGGAAATCTGATCTCGACTTTCCCTTGGGAGTCTCTGGCAGAGATGCCCAACTTGAGGACTCTTGATTTGCATAACAATAAGGTGACCAGCATTCCAGCCGAGGCTGGCAGGTACCTGAGGAACCTCACCTACCTGGACATCTCCAGCAACAAGCTCACCACCTTGCCCTCGGACCTGATGGACATTTGGCCACCCTT ..x..:::......:x.....x.........x:x..:...xx:...x.x...::....x.:........:.....:..:.....:.....:..:........x..x..:..::.::.x..:.....:..:.....:..:..x...x.:.....x.....:........:.x...:....:......:x:.........:..:........:............:.x..x:.......:...::xx.xx.x:............x:......x::..x......xx::.......:..x..:.....:..:..:..::.:.....::.x...:x:.....xxx......:....:......::.....:....:x.x..x.......::........x.....x:.:..::.xx....x.x:...x.x.x:.. 432M 311/432 72.0% 432/94230402 0.0% 0/432 0.0% 75292085 NA +16621 chr4 + 190214555 109867590 109867589 109867950 361 ACTGAAGTCA-----TCAGAATAATCTTTGTCAAC----------------CTTTCCCACCTTCTGT---TTTAGGTCTACAGGACAATCCTTGGTTCTGTGACTGTCATATTTCCAAAATGATTGAGTTGTCAAAGGTCGTTGACCCTGCTATAGTGCTTCTGGATCCACTGATGACTTGCAGTGAACCTGAGCGCCTCACAGGAATTTTGTTTCAGCGGGCTGAATTGGAGCATTGTCTGAAACCATCAGTGATGACCTCAGCCACCAAAATCATGTCTGCTCTGGGCAGTAATGTTCTACTGCGGTGTGATGCCACTGGCTTCCCCACCCCACAGATCACATGGACCAGATCTGACAGCTCGCCAGTTAATTATACAGGTAT chr4 - 94230402 34567333 34567332 34567717 59662686 59662685 59663070 385 ACTGAAATCACAACATTAGAATGTTGCCTGACAACACTTTTTTTCTGTTTGTTTTCCTACTCTTTCTCTCTTCAGGTTTGCAGGACAACCCATGGTTTTGTGACTGTCGGATTTCAAAGTTAATTGAATTTTCCAAAATTGTGGACAACTCAATCGTACTTCTTGACCCACTGGTTACATGTAGTGGACCGGAGAGCTTGGCAGGGATCTTGTTCCAGAGAGCTGAGTTAGAACAGTGTCTTAAGCCATCTGTGATGACATCAGCAACCAAAATCACCTCCCCACTGGGAAGCAATGTTCTGCTACGCTGTGATGCTACTGGATACCCAACACCGCAGCTTACTTGGACTAGGTCAGACAATATACCAGTGAACTACACAGGTAT ......:...-----.:.....:x.x::..x....----------------:.....:..::.:.x.---..:....:.:........:..x.....:..........:x.....x..:x.:.....:..x..x..::.:..x...xx:x.x..x..:.....x..:......:.x..x..:....:...x...x..:.x:....:..:.....:...x.:.....:..:..:..x.....x..:.....x........x.....x..........:x..:x.x.....x..:........:..:..x........:.....x.x...x..x..:...x.:..x.....:..:..x....::x::.....x..:..:........ 10M5I20M16I16M3I315M 265/361 73.4% 385/94230402 0.0% 24/361 6.6% 75300257 NA +30878 chr4 + 190214555 109869601 109869600 109870789 1189 TTTTCTTTTTGTTCCTC------ACAGACTATACATT-TGTTTTCTTCCAGTAATACAAGAATCTCCAGAGGAAGGAGTCAGATGGTCCATAATGAGCTTGACAGGCATTTCTTCCAAAGACGCTGGGGATTACAAATGTAAGGCCAAAAATCTGGCTGGGATGTCAGAAGCTGTGGTTACTGTGACAGTGCTTGGCATTACCACAACTCCAATACCACCAGACACTTCTGAAAG-----------------AACTGGAGATCATCCTGAGTGGGATGTCCAGCCGGGATCTGGAAGATCTACATCTGTATCTAGCGCATCATCATATCTTTGGTCCTCTTCCTTCTCCCCCACATCTTCTTTTTCTGCTTCTACTTTGTCTCCTCCCTCTACTGCTTCCTTCTCTTTATCTCCTTTCTCCTCCTCCACTGTTTCTTCAACCACAACTCTGAGCACAAGC----------ATCTCAGCAAGTACCACCATGGCCAACAAGCGATCATTCCAGCTCCACCAA-GGTGGGAAAAGAAATTTAAAGGTGGCAAAGAATGGAAGTAAGCTTCCTCCAGCCAGCACAAGTAAGAAAGAAGAGCTGGCATTGTTGGATCAAACAATG------------------------CTTA---------------CGGAGACAAATGCCGCAATAGAAAACCTCAGGGTGGTCAGTGAGACTAAAGAGAGTGTGACATTGACGTGGAATATGATCAACACCACACATAACTCTGCAGTGACTGTGTTGTATTCCAAGTATGGTGGGAAGGACCTGCTGCTGTTGAATGCAGACTCCAGCAAGAACCAAGTAACCATAGATGGCTTGGAACCCGGTGGGCAATACATGGCCTGTGTCTGTCCAAAAGGAGTGCCTCCCCAGAAAGACCAATGCATCACCTTTTCTACTGAAAGAGT---TGAAGGAGATGATTCTCAATGGTCTCTCCTTCTCGTGGTGACCAGTACTGCCTGTGTTGTTATCTTACCATTGATTTGTTTCTTGTTGTACAAAGTTTGCAAACTGCAATGTAAATCAGAACCTTTTTGGGAAGATGATTTGGCAAAGGAGACTTATATCCAATTTGAGACCCTGTTTCCCAGGTCTCAAAGTGT---------AGGTGAGCTCTGGACACGAAGCCACAGGGATGACTCAGAGAAATTGCTGCTTTGTTCTAGGTCAAGTGTGGAATCTCAGGTGACTTTTAAAAGTGAAGGTTCCAGACCAGAGTATTATTGCTAA chr4 - 94230402 34568528 34568527 34569681 59660722 59660721 59661875 1154 TTCTCTTTTAGTTCCTTTTTATAATATTTTATTCTTTACGTTTTCTTGTAGTAATTCAAGAAACACCTGGAGAAGGTGTCCGATGGTCCATATTAAGCTTGACAGGGATTTCATACAAGGATGCAGGCGAATACAGATGTAAAGCAAAGAATTTAGCAGGAATGTCAGAAGCTGCTGTTACTGTCACAGTGGTTGGTGTTGTTACTACAACTGTGTTGCCACAGAAGTATGGAAGGAAGCAGGAGGCTGAGAGACAGAATACCACACTGG--AGGAATCCAAGAAGGAGCCTGAGAGAACAA------------------------------------------------CCACACCT-----------------------------------------CTTCTCACCA-------------------------CATCAACCACCAC----AGCACAGGTTACTACTGAAAGATCAACAAATGCCAGGGTTACTGACAAG-AAGCAATCCAGGTCCATGGCTGATGGAAAGAAAAATTCAAAGACAGTGACAAATGGAAACAAAAAGCAGACTGGGGACATGAGGAAGAAAGGTGAGGAAGCAAAGCAGACTGAGGAGATGAGCAAGAAAGGTGAGGAGGCTTCACTTAAGGCAGCAGCTACAGCTGAGCAAAATGTTACTGTGATGGACCTAAGGGTGATCACAGAAACAGATGAAAGAGTGACCTTGACTTGGAAAACAGTCAATGCCTCAAGCAACACTGCGGTGACTGTGTTATATTCAAAGTACGGAGATGAAGAGATGTTGCCTCTGAGCACGGATTCTAGCAAAAACAAAGTCACAATTGATGGTTTGCAACCTAGTACTCAGTACATGGCATGCGTTTCACCCAAAGGAGTGCCACCTACAAAAGAACAATGCGTTATTTTCACTACTGACATGTTAAATGATGAAAGCAACTCTCAGTTTTCTATTCTGATAATGGGCAGCAGTGCAGCATGTGTAGTTGTTTTACCTTTGATAATTTTCTTACTCTACAAAGTTTTAAAACTTCATGTGAAACCCAAAGCTCCTAAGGAAGCTGACCTTGCAAAAGAAACTTATGTGAAATTTGAAACACTCTCTCTCAAGCCTCGAGCAGTGAACGCAGGAGGAGAGCTCTGGGCAAGAAGGTACACAGATGAGTCGGAAAGACTTCTCCTTTGTTCTAGATCAAGTATGGATTCTCAAATGACCTTCAAAAGTGAAGGCTCTAGGTCTGAGTATCTCTGTTGA ..:......x......:------.:.xx:...x.x..-:........x:......x......x.x..x.::.....x...x...........x.:...........x.....x.x...:..:..x..x..x....:......:..x..:...:.:..x..:.............:x........x......x....::..:::..x..xx.x:.::::...x.x.xx.x..:...-----------------:..x.:.x.:..:x...:--:...xx:.x..xx..:::...::...x.x.------------------------------------------------.....:..-----------------------------------------......x::.-------------------------.x........x..----......:.:----------.xx...:...:.:...xx:.x:.::.....-:.x..x.....x....:x:x-.:...:..:.:.....:....:::.::.x:.......::..:xxx.xxx.x.xx::..::..x.......:x...xx:...xx.:x.:x.x.::x:...------------------------....---------------.x...xx.....:::.x:.::x::....x......:...xx..:..x:.x..:..x.....x.....x.....x.:::....::..x..x::...x....:...........:.....x.....:..x.:x:.:..xx..:...:x:...:::.:..:..:.....:...x....x..x..x.....:...x....::..:xx..:........x..:..:.xx..x...........x..:xx:.....x......:.:.::..:x.......x.x:x.---...x.:.::::.:.....:.xx...x.:..xx.x:...xx.x....:.x..x.....x...:.:.....x.....xxx......::.x..........xx.....x..xxxx...:.x:..x..::.x:.....x...::.x.....:..:......:.xx.......:..x..x.:..:..:.:...:.:xx..---------...x.........:..x....x:...x:.....x..:..:.:.:.x..x...........:......:....x.....::....:..:...........:..:..::.x......:x:..:.:. 17M6I14M1I197M17I18M2D30M48D8M41D10M25D13M4D9M10I30M1D20M1I99M24I4M15I280M3I195M9I124M 721/1068 67.5% 1154/94230402 0.0% 207/1068 19.4% 75301073 NA +3443 chr4 + 190214555 109881743 109881742 109881934 192 AGACAATATATTTTAAATGTTCTTGCCACAAAAAAGATAAGTATTGAAGTGATGGATATATTAATTAGCTTGATTTAGTCATTTCAT---------GTTGTATACATA-----TGTCATAACATTACTTTGTACCCTGTATATATATATACATATGTGTATATATATATGTGTATATATATATATATAAACACACACACATACATA chr4 - 94230402 71926670 71926669 71926872 22303531 22303530 22303733 203 AGATAATACACCCTAAATGTTAATGC-ACAACTACCGTAGAGTTTTA--TGCTAACCACATTACTTAATTCAGTTAATAAAATTCATTTTTGAAGGATTGTATTTACAGTAGCTATTGAAAATTAATTTTATAAATAGCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATA ...:....:.:::........xx...-....xx.xx:..::xx..x.--..x.::x:.:....x...::.:::..x.xxx.x.....---------:......x:.:.-----.:.::x..xx.x.:...:..xx:x.:.xx........:x.:..:...:...:.x....x.:......x...x..x..:::.:.x..:...... 26M1D20M2D38M9I12M5I93M 117/189 61.9% 203/94230402 0.0% 17/189 9.0% 37955073 NA +3974 chr4 + 190214555 109881834 109881833 109881981 148 TATACATATGTCATAACATTACTTTGTACCCTGTATATATATATACATATGTGTATATATATATGTGTATATATATATATATAAACACACACACATACATACACACACACAAGGTAAATACA---TATATACACACACACAAGGTATATAT chr4 - 94230402 8395759 8395758 8395908 85834495 85834494 85834644 150 TGTACATACAGAAGAAAATTCCCCAG-GCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTAT .:......::xx.x..x...x.::x.-:..x...:.:...:.:.:....x:::.:...x..:..:.....::x..:..xx...x...........:...x.....x.::x.x::x...:x..---..:..x.xx:..x.:......x:... 26M1D95M3I26M 93/147 63.3% 150/94230402 0.0% 4/147 2.7% 101486075 88728480 +3354 chr4 + 190214555 109881874 109881873 109881942 69 ATATACATATGTGTATATATATATGTGTATATATATATAT------ATAAACACACACACATACATACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:::.......::...x.:....:.x..:....:...------..x..:.........:...:...x..... 40M6I29M 52/69 75.4% 75/94230402 0.0% 6/69 8.7% 101486086 88728469 +3307 chr4 + 190214555 109881874 109881873 109881944 71 ATATACATATGTGTATATATATATGTGTATATATATATATATAAACACACACACATACATACACACACACA chr4 - 94230402 54293154 54293153 54293224 39937179 39937178 39937249 71 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATA ..::....x.:.........:.........:xxx:...:..x..xx::......x:..:........:.:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 55588720 NA +3269 chr4 + 190214555 109902155 109902154 109902214 60 TTCAAGCAATTCTCATGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCGCCACCACG chr4 - 94230402 18197147 18197146 18197206 76033197 76033196 76033256 60 TTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ......::x...x..x.x........::::...........:....x....:....:::. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 91705008 NA +3283 chr4 + 190214555 109904747 109904746 109904808 62 AGCCTCTGGGCTCAAGAGATCCTCCCACCTCAGCCTCTCGAGTAGCTGGGACTATAGGTACA chr4 - 94230402 18197137 18197136 18197198 76033205 76033204 76033266 62 AGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ...:......:.....x.x.:.x.xx:x........:..:.........:....:.x..:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 91707610 NA +10840 chr4 + 190214555 109912714 109912713 109913468 755 TTTATGGTGAGTAGCGAGTTATCTCCTCTTTGGCAGTCATCCCTGCTTTCCTGTGTGGAGGAATTGCCCACATTCGCATTTGCAAACAGAGG-CTCACTCAAGTGTCACTAAAG-GAAAGGAGGTGGAGCCTGAAGAGCTTTAAAAAGCAAAGCTGAGTCATTCCA---CTTTTCAAAAAGAGAAACTGTTGGGAGAGGAATCGTATCTCCATATTTC--TTCTTTCAGCCCCAATCCAAGGGTTGTAGCTGGAACTTTCCATCAGTTCTTCCTTTCTTTTTCCTCTCTAAGCCTTTGCCTTGCTCTGTCACAGTGAAGTCAGCCA----------GAGCAGGGCTGTTAAACTCTGTGAAATTTGTCATAAGGGTGTCAGGTATTTCTTAC-TGGCTTCCAA------------------------------AGAAACATAGATAAAGAAATC-------------------TTTCCTGTGGCTTCCCTTGGCAGGCTGCATTCAGAAGGTCTCTCAGTTGAAGAAAGAGCTTGGAGGACAACAGCACAACAGGAGAGT-----------AAAAGATGCCCCAGGGCTGAGGCCTCCGCTCAGGCAGCCGCA-------TCTGGGGTCAATCATACTCACCTTGCCCGGGCCATG-CTCCAGCAAAATCAAGCTGTTTTCTTTTGAAAGTTCAAACTCATCAAGATTATGCTGCTCACTCTTATCATTCTGTTGCCAGTAGTTTCAAAATTTAGTTTTGTTAGTCTCTCAGCACCGCAGCACTGGAGCTGTCCTGAAGGTACTCTCGCAGGAAATGGGAATTCTACTTGTGTGGGTAAGT chr4 - 94230402 34583707 34583706 34584506 59645897 59645896 59646696 800 TTCATTATGGGCAGCCATGTATATGCATTCTGGC-------TCTGCTCCCTGGAGTA-AGGAACTGACCACGTTACTATTTGCAAACACAGGGTTCACTCGAGTGGTACTAAAAAGAGAAGAGGTGGGGCAAGTGGAGCCTTAAAAAGGAAAGAGGAGACCGTCCAAGTCTGCGTGTGAAAAGCAACTGCATTTTGCAGGACAGTACCTGGAGATCACACTCCCTGTATTCCTCCGCTGAGGGCAGCGG-TGAAGTTTTCTGAAA------TCTTTGCTTTTAAGACCCAAATGGCAGCTTTGCG-TGTTGTGAGGAAGTTTGCAGTGATTCTTGTGAGCCTTGCTTTTAAGCTGTGTTAAATTTGTGGCGAGAGCGTCAGGCATTTCATACTTGGCTTCCAAAAAagaaaaaaaaagaaagaaacgagagagagagagagagagagagaAAACGAAGTGTGTGGGGAAGAAATCTCCCAGGAATTTCTTCA--AGGTTGTAGTCAGAC-------------ACGCCGGAGTGACAAGAAAAGCAAGGCAAAGATAAAGCTTTGTGCTGTGATAAGATGTCTGAGTGTAAAG---------CAGGAGATCACAGAGACCTTTTGGGATTACCTATGTTCATCTCACCCTGGATATGACTGCAG-ACAAGCTAGCTCTTCTCAAGTGACAGTTTAAAAAACTCAGGACTATGTTTCTCTTCCCCGTTGCTTTCTTGCCAGTGATTTTTACCGTTGACTTTGCCAGCCCTTCAGCTCTGCAGCACTGGAACTGTCCTAATGGATACAGATTAAAGAGTGAAAGCTCTGCCTGTGTAGGTAAGT ..:..x:..:.:...x.xx...x.x.x:.:....-------:.....::.:x.x..:-.....:..x....:..xx:...........x...-:......:....x:......:-..:.:.......:..xx.x:....:........x....xx...x.xx....---..x:x::x:..:..x.....:xxxxx.x:.:.:x...:..xx.x..:x.--.:.:.x:.x:..:xxx.::....:x.::.-..:.::....::xx.------:....x:....xxxx:.:..::xx:x..:....x-...:::::x.....:x..x:----------....xxx...x....:..x...x........x:::..:.:......:.....x...-..........------------------------------...:.x.x...x.:.....x.-------------------.:...::x.:x..:.:.::--...:..:.x.....x-------------.x.xx:...:xxx:..:.x.:..:x:...x::x.:..:-----------.x......:.:x..x.:x:..---------....x:::.:..-------.:....:.:.x::..::...:..::...x..x:...-..x...-.x..x.x....x..:..xxx...x....:...xxxx...:..:....:.x...x::.:::.:::.:.x........::...:x.xxx..:::....::..:.::.....x.:...........:.......:.x..xxx:xxxx:.:::.:..::.::...:.:.....:....... 34M7D16M1D34M1I21M1I51M3I49M2I29M1D15M6D34M1D20M10I56M1I10M30I21M19I19M2D15M13D38M11I21M9D12M7I36M1I6M1D177M 439/714 61.5% 800/94230402 0.0% 127/714 17.8% 75329007 NA +3043 chr4 + 190214555 109927796 109927795 109927857 62 TGAATTTTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACATTT chr4 - 94230402 56965639 56965638 56965700 37264703 37264702 37264764 62 TGAATTGTTCTGTGGTTTTGTTTGTTTTTGTGTGTGTGTTTGTGTGTGCATATGACACAATT ......x.x.:...xx.x...x...x.x...........x........::.:...x...x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 52962157 NA +11586 chr4 + 190214555 109940927 109940926 109941179 253 TCTCTTTCTTCCCAC-CCAGGTCCTGCACCCTTCTTAATTTTCTCCCATGGAAATAGTATCTTTAGGATTGACACAGAAGGAACCAATTATGAGCAATTGGTGGTGGATGCTGGTGTCTCAGTGATCATGGATTTTCATTATAATGAGAAAAGAATCTATTGGGTGGATTTAGAAAGACAACTTTTGCAAAGAGTTTTTCTGAATGGGTCAAGGCAAGAGGTAAAATACCCTTACCT---ACAGTGTTTGAGCTGTT chr4 - 94230402 34595143 34595142 34595399 59635004 59635003 59635260 257 TCTTTTTTTTTCCACACCAGACCCTGCACCATTCCTACTTTTTCACCATGGAAGTGCCATCTACAGAATTGACACTGAAGGGACCAATCATGAAAGATTGGTGGATGATGCTGGTCCATCTGGACTTATGGATTTTCATTATACAGAAGAGAAAGTATACTGGGTAGATTCAGAAAAGCGACTTCTGCAAAGAATTCACCTGAATGGCACAAAAAGAGAGGTAAAGTCATCATTTCTCTCAAATTCTTTGAGTTATT ...:...:..:....-....::........x...:..x....::x........:.:x:....x:..:........x.....:......:....:x:........xx.........x:x..x.x:x.:................xx..::.:.:.:.x..:.....:....:.....::.:....:........:..:x:........xx...::x:.........:.xx:.x.x:..---.x.x.x......:.:.. 15M1I221M3I17M 182/253 71.9% 257/94230402 0.0% 4/253 1.6% 75345784 NA +6621 chr4 + 190214555 109943223 109943222 109943465 243 TTAATAACAATTTTAAAATTTGATTTTGCAGAGAGTATGTAATATAGAGAAAAATGTTTCTGGAATGGCAATAAATTGGATAAATGAAGAAGTTATTTGGTCAAATCAACAGGAAGGAATCATTACAGTAACAGATATGAAAGGAAATAATTCCCACATTCTTTTAAGTGCTTTAAAATATCCTGCAAATGTAGCAGTTGATCCAGTAGAAAGGTAAATTCTGCTGTATTCAGA----CATTGAAAT chr4 - 94230402 34596285 34596284 34596527 59633876 59633875 59634118 243 TTGTTAACAATTTTCTG--TTGGTT--ACAGAGATTATGTTATATAGACAAAGGCATTTCAGGATTTGCTATTGACTGGATAAACCGGGACATTCTCTGGGCCAACAGACAGAAAGCAACCATAGAAGCAACAGACATGAATGGGAAGAAACGCCGAGTTCTTCTAAGAGATATTGGTCGCCCCACAAAGATTGCCATTGATGCTGAGCAAAGGTAATTTTAACTAGGTTAGTAATTGCATTAAAAT ..:x..........xx:--...:..--:......x.....x.......x...::::....x...x.x..x..x:.:........:x::..x:..x.:...x.x..:x:....:...x..:...x:x..:......:.....x..:..x..x:x..:x:.....:....x.x.x.x::x:::..::....x:.x..x:.....x.x.x:x........x..:x:..:x:..x:x.----....:.... 17M2D6M2D207M4I9M 154/239 64.4% 243/94230402 0.0% 8/239 3.3% 75346938 NA +8215 chr4 + 190214555 109945052 109945051 109945281 230 TCTTTTGTGGTTGCTTTTTAGGCATAATTTGTTTGCAATGTCCCTTTTTGGTGACCGTATCTTCTATTCAACATGGAAAATGAAGACAATTTGGATAGCCAACAAACACACTGGAAAGGACATGGTTAGAATTAACCTCCATTCATCATTTGTACCACTTGGTGAACTGAAAGTAGTGCATCCACTTGCACAACCCAAGGCAGAAGATGACACTTGGGAGCCTGGTGAGT chr4 - 94230402 34600340 34600339 34600564 59629839 59629838 59630063 225 TTTCTTGTTGTTG-----TAGATATCAGTTGCTTGGTATGTCTCTCTTTGCTGACCACCTGTACTATTCGGAGTTGAAGTCTGGTACAATATGGACAGCCAACAAGTATACTGGAAAGGCTGTAGTCACTATTAGCCTAAAACCATCACTTTTTTCACTCGTGGAGATAAAAGTAGTGCATCCATTTAAACAACCTGGTGCAAGAACAGATCTCCAGGAGTTTGGTAAGT .:.:....x....-----...::..x.x...:...xx.....:..:....x.....::x.x.x......::x:.x...:x:x::x.....x....:.........::.:..........x::.:..:.xx....:...xx.x:.....:..x.x:....:.xx..:x.:...............:..:x......:::x...::.:xx..:x::::....::....:... 13M5D212M 147/225 65.3% 225/94230402 0.0% 5/225 2.2% 75344712 NA +3082 chr4 + 190214555 109958914 109958913 109958962 49 TCTCAAAAAAAAAAAAAAAAAAAAAGTATTCTTAGGTTTGAATCTGTTT chr4 - 94230402 72310659 72310658 72310707 21919696 21919695 21919744 49 TCTCAAAAAAAAAAAAAAAGAAAAAGGATACTTATATTTCAACCTCTTT ...................:......x..x....x:...x..:..x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 37648255 NA +8547 chr4 + 190214555 109960856 109960855 109961010 155 TCATTGTGCAGATGTTAATGAATGTGCTTTTTGGAATCATGGCTGTACTCTTGGGTGTAAAAACACCCCTGGATCCTATTACTGCACGTGCCCTGTAGGATTTGTTCTGCTTCCTGATGGGAAACGATGTCATCGTAAGTTATAGCAA--CAAGTAT chr4 - 94230402 34605405 34605404 34605561 59624842 59624841 59624998 157 TCTTTTGGCAGATATCAATGAATGTGGCTTCTGGAATCATGGCTGCACTCTGGGCTGTGTGAATATCCCTGGTTCGTATTATTGCACGTGCCCTAGAGGTTTTGTTCTGCTGCCTGATAGGAAAACATGTCATGGTAAGTAGCACTAATTCAAGCAT ..x..xx......:.:..........x:..:..............:.....x..x...:x:..:.:......x..x.....:............:x...x...........x......:.....xx.......x......x::.x:..--....:.. 148M2I7M 122/155 78.7% 157/94230402 0.0% 2/155 1.3% 75355451 NA +6062 chr4 + 190214555 109961825 109961824 109961991 167 ATTTAACACTAATCTTGACCTTGTTCTTTATTAAT-TAGAACTTGTTTCCTGTCCACGCAATGTGTCTGAATGCAGCCATGACTGTGTTCTGACATCAGAAGGTCCCTTATGTTTCTGTCCTGAAGGCTCAGTGCTTGAGAGAGATGGGAAAACATGTAGCGGTGAGT chr4 - 94230402 34607396 34607395 34607563 59622840 59622839 59623007 168 ATTTATGATTATCTTTTTTCCTCTTTTAAATTACTGTAGAGCTGATTTCCTGTTTAAATAACGACACTGAATGCAGCCACGGTTGCCTTCAGACATCTAAAGGGCCTGTTTGCTTTTGTCCTGAAGGATCTGTACTCAAAGAGGATGGCAAAGCATGCACGGGTAAGT .....xx.:..x::..xx:.:.x..:.xx....x.-....:..x:........::.x::..:.xxx.............:.::..:x...x......x:....x..:x.x..:..:...........x..x..:..::.::::.....x...:....:.xx...:... 35M1I132M 111/167 66.5% 168/94230402 0.0% 1/167 0.6% 75354429 NA +6849 chr4 + 190214555 109963171 109963170 109963356 186 AGGTTGTTCCTCACCCGATAATGGTGGATGTAGCCAGCTCTGCGTTCCTCTTAGCCCAGTATCCTGGGAATGTGATTGCTTTCCTGGGTATGACCTACAACTGGATGAAAAAAGCTGTGCAGCTTCAGGTTAGTGCTGTGGT-TGTCTG--GAACTGTGTCCCTGAAA--AAAAATTCATGAAAATCTTTT chr4 - 94230402 34608760 34608759 34608950 59621453 59621452 59621643 191 AGGTTGCACATCTCCAGATAATGGTGGCTGTAGCCAGATATGTTCTTCTTTAAGCCCATTCTCCTGGGAGTGTGCTTGCTTTCCTGGATATAAGCTTCAACGAGACAGAAAGCACTGCACTGCTATAGGTCAGTATCTTGATAAGTCTGCTTATTTCTGCCAATGAAAGCAAAAATGTTTCAGAAGCTTTT ......:x.x..x..x...........x.........x.x..:x:.:..:.x......x.x........:....x............:...:.x..x....x:..:::...:x:...::.x...x:....:...:::x..:.-x.....--x.x:.x..:.xx.....--......x:x.x.:..x..... 142M1I6M2I17M2I21M 131/186 70.4% 191/94230402 0.0% 5/186 2.7% 75354411 NA +8111 chr4 + 190214555 109964378 109964377 109964584 207 CATATTTGAAATT--TGGTTAACAGGACCACAACCATTTTTGCTGTTTGCCAATTCTCAAGATATTCGACACATGCATTTTGATGGAACAGACTATGGAACTCTGCTCAGCCAGCAGATGGGAATGGTTTATGCCCTAGATCATGACCCTGTGGAAAATAAGGTATGGTTTTGTTACTTGAACAGATGTGGACATGCTTTAAGGACAGA chr4 - 94230402 34609702 34609701 34609909 59620494 59620493 59620701 208 CATACGTGCAATTCTTCGTCACCAGGCCCCCGTCCATTTCTGTTGTTTGCAAACGGCCAAGATATCCGCCGGATCAGTTTTGATGGAACAGATTATGCAAGTTTACTTGACGGGCAGATGGGAGTAGTCTTAGCGCTGGATTCTGACCCAGTGGAAAATAAGGTAAGGTATTA-AAAATGAGAGGATTTTGAAGTGTTGCAAGGACAAA ....:x..x....--.x..:.x....x..x.:x......:..:.......x..:xx:........:..x.:x..xx:...............:....x..x.:.:..:::.x:..........:.:..:.xx..x..:...:x......x...............x...x..:-x.xx...:x:...x.x..x:..:.x:.......:. 13M2I158M1D35M 145/206 70.4% 208/94230402 0.0% 3/206 1.5% 75354676 NA +9984 chr4 + 190214555 109968952 109968951 109969132 181 CCTGTGTTCTCTTTT-GTAGATATACTTTGCCCATACAGCCCTGAAGTGGATAGAGAGAGCTAATATGGATGGTTCCCAGCGAGAAAGGCTTATTGAGGAAGGAGTAGATGTGCCAGAAGGTCTTGCTGTGGACTGGATTGGCCGTAGATTCTATTGGACAGACAGAGGGTATGTTTTCTGC chr4 - 94230402 34610997 34610996 34611178 59619225 59619224 59619406 182 CCTGTGTTTTTTCTTCACAGATTTACTTTGCCCACACCGCCTTGAAGTGGATAGAACGAGCTAATCTGGATGGCTCAAATCGTGAAAAAGTTATTCATGGAGCTATAGATATACCCGAGGGCCTTGCTGTGGACTGGATTAACCGTAAATTGTATTGGACAGACCGAGGGTACATGCTCCAC ........:.:.:..-::....x...........:..x...:.............:x........x.......:..xx.x..x....::x.....x.x.:..xx:.....:.:..x..:..:..................::.....:...x............x.......::.x:..::. 15M1I166M 139/181 76.8% 182/94230402 0.0% 1/181 0.6% 75357955 NA +14340 chr4 + 190214555 109975993 109975992 109976288 296 TGTGCTTTCTTGATTAAAGGAGATTATTCTGGACTGATACAGGGATTAATCCACGAATTGAAAGTTCTTCCCTCCAAGGCCTTGGCCGTCTGGTTATAGCCAGCTCTGATCTAATCTGGCCCAGTGGAATAACGATTGACTTCTTAACTGACAAGTTGTACTGGTGCGATGCCAAGCAGTCTGTGATTGAAATGGCCAATCTGGATGGTTCAAAACGCCGAAGACTTACCCAGAATGATGTAGGTGAGGCTTTGGGATGGGCGAT----TTTTTCATCTTGACTGAGTGTTTATGAGTGT chr4 - 94230402 34615099 34615098 34615398 59615005 59615004 59615304 300 TGTGTTTTGTTTTCTAAAGGAGGTTATTCTGGACTGAAATGGGCATCCGTCCCAAAATTGCCAGCTCTTCATTAGAAGGCATGGATCGTCGGGTTATAGCCAGCATGGGTCTGGTGCATCCCAGTGGAATAGCTCTTGACTACTTAGCCAACAAGTTGTACTGGTGCGATGCTAAGCAGTCAGTGGTTGAGAGTGCAAATCTGGATGGTTCTGGTCGTCGAATTCTTGCACAGAATGATGTAGGTGAGGCTTTGGGGTTGATAATTACCTATTGCTTCTTGTCAGTGTGCATGTGTATGT ....:...x..xx:........:..............x.::..x..:x:...xx:.....xx..:.....x:.xx.....x.x.::....x.............x:x.:...::.x::x............:.xx......x....:.::......................:........x...:....:.xx..x..............x::x..:....xx...:.x..........................:.x.:::..----.x..x.x.....x.x.x...:x.:..x:... 265M4I31M 219/296 74.0% 300/94230402 0.0% 4/296 1.4% 75360894 NA +12716 chr4 + 190214555 109979903 109979902 109980172 270 CTTGTCCTTTCGTAAATAGTCATTGCAAAGACAAAGAAGGTGTATTTAACAAACTTGAATTGTTTCCAGGTCACCCATTTGCTGTAGCAGTGTTTGAGGATTATGTGTGGTTCTCAGATTGGGCTATGCCATCAGTAATGAGAGTAAACAAGAGGACTGGCAAAGATAGAGTACGTCTCCAAGGCAGCATGCTGAAGCCCTCATCACTGGTTGTGGTTCATCCATTGGCAAAACCAGGTACATACTGGAGATGTTACACAGTCTTTCCTT chr4 - 94230402 34618911 34618910 34619167 59611236 59611235 59611492 257 CTTGCTTTCTCGTGTATATTC----TACAGATGTAGGAA-------TGAGGAATCTTATTTCTTTGTAGGCCACCCCTTTGCTGTAGCGGTGTTTGAGGATCACCTTTGGCTTTCTGACTGGGCTAGGCCATCACTAATGAGGGTTGACAAGAAGACCGGCCAAAACAGGGTACGTCTTCGAGGCAGCATGCTGAGACCCTCATCAATGGTTGTAGTTCATCCTTTGGCGAAACCAGGTAC--ACTGCAAAAACTGAGCAGTCATTCCCT ....:::.:....:x...x..----:.x...::x..:.:-------.:.x:..::.x.x..x...x:...:.....x...........:............:.:x.x...:.:..x..:.......x.......x.......:..x:......:...:...x..:.:..:........:.:..............::.........x.......:........x.....:...........--....x.:.x::.:x:.....x....:. 21M4D14M7D195M2D27M 193/257 75.1% 257/94230402 0.0% 13/257 5.1% 75360992 NA +5718 chr4 + 190214555 109987741 109987740 109987978 238 TAGATCAAGATGACTGTGCTCCTGTGGGATGCAGCATGTATGCTCGGTGTATTTCAGAGGGAGAGGATGCCACATGTCAGTGTTTGAAAGGATTTGCTGGGGATGGAAAACTATGTTCTGGTAAGAGAAAA----------------GGGCAAATTCACATATTTGGACAATACTGAACCAGAAACATTTTTTCTGCTCTT------TCTGACTCAAAAAC---TCCAGAAGGATTTATGTAATCAGCAGATTTGAATAAGTT chr4 - 94230402 34621574 34621573 34621834 59608569 59608568 59608829 261 TAGATGAAGATGACTGCGCTGCACTAGAATGTGATGCCAATGCACAGTGTGTTTTGCTGGAAGATGGTGCTGTATGCCAGTGTTTGAAAGGATTTACCAGGATGGGCAAATCATGCTATGGTAATGAAAAACACTTAACACGACCTTCAGGAAAAGCATAGATGTGGGCAAAG--GAAGAAAACCTGTTTTATCTCCCCTTGGCAGCTCTGCTGCATGAACCATCACAAAAAGGTCAATGAGATCACTTGTTTTGAAATGGTT .....x..........:...x.xx.:.:...::::::xx....x.:....:...::xx..:...x.:...:::...:..................:.::..:xx..x...::...:.x......x::....----------------x:.x...xx..:.x..x...:...x:--...xx.:.xx::....x...x.:...------....x:x..x:...---:x..:..:.:.:x...x:....x:x.x......xx:... 131M16I26M2D26M6I14M3I39M 151/236 64.0% 261/94230402 0.0% 27/236 11.4% 75366167 NA +5197 chr4 + 190214555 109988577 109988576 109989252 676 CCCACAGATATAGATGAATGTGAGATGGGTGTCCCAGTGTGCCCCCCTGC--------CTCCTCCAAGTGCATCAACACCGAAGGTGGTTATGTCTGCCGGTGCTCAGAAGGCTACCAAGGAGATGGGATTCACTGTCTTGGTAAGAGGACACATGTGCTGGGGAGGAGGGCAGAGGCAGGCCTCAGAAATCGGGAAACAATGTGGGTGCATGAGCAGAGGGAAGACAGGATATAATTGGGGTGACACACATGTCAAGATTTAAAGAGTTGTGCGACCTGCTCAAACTGACGTATTTCCATTCTTGGTGAACAGTC----AAGTTTGTGCCCTTGTGTTATTACTGCCCTAGTCAGCTTCAAGCCCCTTTGGAGGCTGTTTACTCCTCTGCCTTTCTAATTCTTTC--TGGGGTTTGAGT------GACACCAGTGTCTCATCAATACTTCCCACCTTGAGCCATCATGGGGGGAGTTGGACAGCATTTA----CTTGTCAGTGAATTTGGTAAGAGAAATGTG----GTGAACTGCAGAGCTGATGACAG-----------TTTGTTGGAAGTCACTGCTGTGTGTATAAAGAAAAGGAGGTGT--GGCTTGTCAAAGGGCTCCTCTCACATTTCTTGATAAGTTCAATAGGTGGGAGAGTCAAGCCACTGACG-TTGAAATACAAGTAAAGAATGATTCAACCCTCTTTCGTAATC chr4 - 94230402 34622688 34622687 34623353 59607050 59607049 59607715 666 CTCACAGATGTCGATGAGTGTGC--------TGCAAATATGGACCACTGTAATCGAAACCTGTCGGGCTGTATCAACACTGAAGGGGGCTATGTCTGTAAATGCCTGGATGGCTACACGGGAGATGGACTCCATTGTGAAGGTACGGGAGTGCAT-----------GAGGACTGTGCTCCTTCTGGTAGGTTGGAGTAGAAGGAATGAGCAAGAG--------ACACTTCTAGTAATTTGGGCTAGCTCTGCATCA--ACCTGTGGAGCTGTCT--CATGCCCATGATGATTGGTTCCGGTTCTTTTTGAAGAATCTGGTAAGGGTGTGGATCCTTACAGTGGCTCCCTCAGACAG-------------TGGACGTTAATCATT--TCTTGCTTTTTGATTCTTTCCTTCCTGTCTGAATTGTGACGGCCTCAACAGCTGATCATTATGAAAAGCCTGTAGCTGTCA-GTGCAGAGTTCCTCTCTGTTTGCACTCTTTTTAGTAGCTACAGCAGGAGAGAAAGGATGAGTGAAGGAGGGAAATGGAGGCAAACCAGTAGAGCTTTATTGGAAATCATTGTCATGAATACAAACGAAAGCAGGTATTGAGTGTGTCATAATACTCATCAAATAATTACAAGTTGGCTTGATAGGCATGAGGTTCAAGGTGTTGACACTTAGAATCTGAATACAT-----TTAGACTCTCATTAATAATC .:.......:.x.....:....x--------.x.x.:.:..xx..x...:--------.::x..x::x..:........:.....x..:........:x::...:::..x......xx:........:x.:..:...xxx....x.:.::::...-----------....:.x.x.x:xxx:..x:x.::.:..::x.x..x.x:x.x...x...--------.x..xxxxx:.....x...:x.xx:x::::...--.::.:x:...:...x:--.x...:..x:x...:xx:..:.x:.....xx....x.:..----...xx....xx:::x.::x:.x:..x..::..x...-------------....x.:.:x.:.:.--...xx....:.:........--.xxx..:...:.------.:.x:..:::x..x....x..:xxxxx:...xx...::...-.x.x:.....xxx.xx::...:----...x.:...::x.x::.:.:....:.x:x.----.....xx:x:..:x..:x.:..:-----------...:......:...:..:::..x:..:...x:....x....:.--:.:x.....x.:x:...x..xx.:.x..x:x::.x:.:.::.....::x...:x.....x:::....:-..::...x::.:..x.x-----..x:..:...x..x:..... 23M8D19M8I97M11D49M8D33M2D16M2D40M4I36M13D15M2D20M2I12M6I41M1D22M4I30M4I23M11I43M2I68M1I17M5D20M 361/624 57.9% 666/94230402 0.0% 94/624 15.1% 75365889 NA +3252 chr4 + 190214555 109992165 109992164 109992238 74 TTCTTTAAAAAAAAAAAAAA--AAAAAAAAAAAAAAAAGACAGAGAGAGAAAGAACGGAAACAAAAAAGGAAAACA chr4 - 94230402 42895005 42895004 42895080 51335323 51335322 51335398 76 TTTTTTGAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAATCA ..:...:...:.::...:..--.........:......x.x.......:x:.....x.x:.x...xx......x.. 20M2I54M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% 67097160 NA +3021 chr4 + 190214555 109992174 109992173 109992239 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAGACAGAGAGAGAAAGAACGGAAACAAAAAAGGAAAACAA chr4 - 94230402 20475871 20475870 20475936 73754467 73754466 73754532 66 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAA ...................:..::..:x.x:.x::..::.x:x..:.:....x........x.:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 89516303 NA +5480 chr4 + 190214555 109993234 109993233 109993400 167 TCTTTTCTGACAGATATTGATGAGTGCCAACTGGGGGAGCACAGCTGTGGAGAGAATGCCAGCTGCACAAATACAGAGGGAGGCTATACCTGCATGTGTGCTGGACGCCTGTCTGAACCAGGACTGATTTGCCCTGGTAGGTTGGTGGGTGGTCTACAGTGAAGGGG chr4 - 94230402 34624332 34624331 34624498 59605905 59605904 59606071 167 TTTTGGCTGATAGATATTGATGAGTGCAAGATGGGGACCCACACCTGTGGAGAGAACAGAACCTGCACAAATACAGAAGGAAACTTCACTTGCTCCTGTCCTGATGGTGCTTCTGGAACTGCCATGGGTTGTGGTGAGTATTTGGAGTGAGAATTAAAATGAAGCGG .:..xx....:................x.:x.....:xx....x............::xx.x...............:...::..x:..:...x:x...x...:xx.:x:x....:.x.x.xxx..:x...:xx..:xx:x....x.x.x.:x:..x.:.....x.. 167M 109/167 65.3% 167/94230402 0.0% 0/167 0.0% 75368902 NA +3062 chr4 + 190214555 110004184 110004183 110004248 65 GGCTATTCCCCCCAACATACATGGGCATACATACACACACACACACACACACACACACACACACA chr4 - 94230402 30570611 30570610 30570675 63659728 63659727 63659792 65 GGATATTCCTTGTAACATTTGTATGCATGCATCCAGACACACACACACAGGCACAAGTACACATA ..x......::x:.....x::.:x....:...x..x.............x:....x::.....:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 79433573 NA +3128 chr4 + 190214555 110004984 110004983 110005063 80 TGCTTCTAATTTATTTTCTTTCTTTCTTTCTTTTCTTT----TTCTTTTTCTCTGTCTTTTTTTTTTTTTTTTTTTTTTTTGGA chr4 - 94230402 90430974 90430973 90431057 3799346 3799345 3799429 84 TGCTTTTAGGTTATTATTTTTCTCTTTTTCCCCTCTGTGAGGTTGCGTCCCACTTGTTTTTTTTTTTTTTCTTTTTGTCTTGAA .....:..:x.....x.:.....:.:....:::...x.----..x:x.::.x..xx:.............:.....x.:...:. 38M4I42M 56/80 70.0% 84/94230402 0.0% 4/80 5.0% 19574010 NA +3455 chr4 + 190214555 110005121 110005120 110005194 74 CTGCAGCCTCGAACTCCTGGGCTCAAACAATCCTCCCAGCTCAGCCTCCCAAATAGCTGGGACTACCGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.:..:.....:....:::x.:.x.xx:.........::...:.......:.....xx.::... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 91807995 NA +3048 chr4 + 190214555 110027697 110027696 110027755 59 GTTTTATTTTTATTTTATTTGTTTATTTTTTGAGACAGAGTCCTGCTCTGTTGCCCAGG chr4 - 94230402 50147694 50147693 50147752 44082651 44082650 44082709 59 GTTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCTTCTGCACTGG .....x.....:....:.......:......xx......:x..::.:..x:...x.x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 59880003 NA +3046 chr4 + 190214555 110042835 110042834 110042879 45 AGCTACAAACCGGCACAAAAAAAAAAAAAAAAAAAATTTAAATTG chr4 - 94230402 66287447 66287446 66287491 27942912 27942911 27942956 45 AACTATGTACCGGCAAAAAAAAAAAAAAAAGCAAAATTTAAATTG .:...::x.......x..............:x............. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 43755388 NA +3124 chr4 + 190214555 110044260 110044259 110044310 51 TCATTTATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACCAGCCAG chr4 - 94230402 3830940 3830939 3830989 90399414 90399413 90399463 50 TTATTTATG-TAAAAGAAAAGAAGAAGAAAAAAAGAAAAGCAACCAGCCAG .:......x-.....:....:..:..:.......:....:........... 9M1D41M 42/50 84.0% 50/94230402 0.0% 1/50 2.0% 106213320 84001235 +59428 chr4 + 190214555 110049170 110049169 110051780 2611 GTCTTTTCAGCTCATGTCAGATTTTGCATAATTTATAATACATTCCTCCATCAGTTGTGTCTCACCTATGAACCAACATCAAGACATTATAGACTGCTCACAATCATTTAACATAGATGTAA-CAGCTTTCCTCCCCTGCACTGTCCCCCACTCCCCATTTCTTCCAGTCATGACTT-GGTTTGCATGGATTCTTTGTTCACTGCTCAAACCATTCACACAGAATGGAATAAAACTTTATTCTTTTTAAATTCCACACATAAACGAGATGCTGAAAAAGCCCTTGCCATCTCT-GACAGAAAAGCAGAGCAGCTCTGTTTCATGAACGACAGCACAATTAAAGCTAAAA----TAATATAAAAATAATTCGAAAAAATCCCTTTTACTGTACACTCTCAAAGCAAGA-AAGAGAAACAACAGTTTTGTTTTGTTTTTTTCTGCTAGCCAGAAAATGTGTTTCTATTCATTTGGGCTTTGAAGTTCAGTGTACCCCACATCTGTGTGTCTGTGTGTGTATGCGTGGCTAT--GTGCGTGTAATCTATGCAGTGTGGAAGCCCCTAATCTTTTCATCTAGTTTGCCTAATCATT-----AAGCTACTTAACCAAT------TATAATACTATTATGTCACATTGAACAAC---TTTACATAATTGCTTCTTTGAAATACTAGAAACATTGACACATGT-ATTTGGCTTGTAAAGGACTGAAATATTACAGAGAATATTATCCAGCTTTTTTTTTTTAAAGAATATGGCTCTTAATAAATTGATTT-TGAGTTCCAGAGCTAAAGTCCCTTTTAAAACATTTCTGAAGCTGACTTGAAGCAGGATGAATATCTTCTGATTTGGCCAAA-------GACATGACAAGTATTTCATAT-----------CACTTAAAATTTGAGGGATAAGTGTATGGGGGC------------CCTTTGTTGTCAACTGTTTTCAGCCAAACT---------------TGCCTTGAAG------------------TTTGTTGTAGTATTGCCACTCAGCCAGCAGAGGGCCCTTTAAACACCTCTACATTGCTTGGGGAGCAAATGCAGATGATGCAGAAACACAGTGTTCCCCCAATATTTCGAACAGCCCTGTGATT--TCCTTTTGGAAT---TCACAAAAATATCGAAAATATGCGCTATACTGTGGGGTTTCATTTGGAAAGTTATGAGTGTGTGTGAAGTCAAACAGGGAGGGGCATACACACCATCTGTCTGTCGAATTGATCTTCGGCTCACCTCTTTTCCCACTGCCTTTCTCCCTTTTCCAGCTCACAGTGGTCCTGGGCCGGGCCTTTTTACAAATACTACAGAACCCGTTTTCACATTGTTTGGTTGAGTGTTTATCTTTTTCAATTCTGTATTTACTCTTCTGTTCAAAAGCCCGGGGCAACTGAACAAA--------AGGATAATGCTTCATATCTCACTTAAGAGTAGAAATTACAG---TTCAACTATCAGAAATGCTCTGGGA---TGGAGCTGCCCCCATGGGACCTGGGCTGCA-------CTGTTTCCATCCTCCCAGGAAGAATCTTGGGGAAGTATT-CACCCCCTTTGGTTTTGGCAAACTCACTAGCCTGAGGCTATGC-----------AGTGAAGATGAAGTTAGTTGAAATATAGTTGTTTACATCTGTTTTCATAAGGATGATTAAGACATCTTTTCTCATGGGGTCTACAGCAGCTGGCATT-TCTTAAAAAGGCTTTAGTTTCTGC-AAAAGCATTATCGTTCTA-------GATATACACCCTGTGTCTCTTTCATTTTTGTCTTTTCTATTGGCTCCAGTTTAGTGTCCATAAA--GTTAGAAAGGATTGTGTGTGTTGTGCTCGCACAGTTTCTAGAGTAAAAATCTTTCATCTTAGAGAAATGTGAC--ACTTAGTA-AATACATTTTTTCCTAT--GTGTTAATAGCCTTTGTTTGCCTTTGATTAGTCTC---CTCTGCTTCTGGCTTGCTTTTGTTCTCCCTTGTCCTAGAGTTGATAGATAAAGAGGGAATGGGGTCTTCCAGCAGCAGTGCTTGGAGATGGAGGTGCACTCAGTGAGTCCTCACCCTAAAAGGATCATAAACTTACTGGGTTAAATCAACCTAATTATCCCTAAGCTGCCTTGGGTTTTGTGTTTGCTCATGTTTTGTTTTGTTTTAGCTGCACCACG------TGTGATTCCTTGTGCCATTTTCTTTTGTC----TATTATTTTTCTTGATGACCCTGAGCTATGGCTTCCTCCTCAGTTCCAACACTATTCAGCTTTCGTTGTTTTCCTCATTTTGCCGATGTAGGCCTCAAAGAAGAAATGGCAGAAGAGCACAAGGTAGCTGAGGTACATGAGTGAGGACCAGAAGATGTTCTGAAAGTGAGAGTGACACTGGTCATGCTGCATCCAGCAGAAGACCAGGTAGTTAACCACACAGCCCATCAGCATCTGAGTGATCTGGGACAAGGTGATGAACATGGCAAACTTCCGGGAGACTCGGAAACCTGCCGCCCGCAAGGCATAGTAAGAGTACATCACGGCGTGCACGCCATAGTTCATAGTCATGAACCAACCTCCCCCGGCAACCATGTCTTTGTAGGAGTACCAAGAGTACAGGAGCACAGTGATGTGGTGATACCAGTGCAGGAAGATCAGCTTCTGCTTCCTCAGAATAATGAATATTGTATCTCCTGGAAGACAAAGAGGAA chr4 - 94230402 34669870 34669869 34672409 59557994 59557993 59560533 2540 GTCCTATTAATGAATATCATAGCTTCATTACTGGATATCACATTTTGCTGTTTGTTGTGTACCA----TAAAATAACGTCAGCACATCAATAACT---------TAAATAACACAAATGTAAACATCTTTTCTGC------------------------TTGTTATAATTATGATTTCGGCCTACGGAGGCTTTTTG---ATTTGTAAGACCATTCACATAACATGGAATGTAACTTTATTTGTTTTTC-TTTTGTATATAA-TGAGACACC--AAAAGCCCTTGTCATCTCTTAACAGGATACTAAAGCAGCTCTGTTTCATGAATGACAGCACAATTAAAGCTAAAAATCGTAATTAAAAAAAAAACC----AAACCCTTTGCACTGTACAATCTCAAATTAAAACAAGAAAGATAATGACAATCTTTTGC--------GTTAGCCAGGAAATGTGATTCTCTGCCGCTGGGCTTTTTTCTTGCTGACAATTCACA-------GAACGTGTATATGGGTGTAGTTATAGGTGTGTGTATTCTACGCAGAACAGCAGCCCCTATTTTGTTGATCTAGTTCTTCTAATTGTTTAGTTAAGCTACCTAACTGATACAATTTAGAGTACTACATTAACACATTTAACATCAAGTTTACATACTTGCGTCTTTGAAATACTAGGAACTTTTACACATTTTATTTGGCTTTGTAAGGACTGGAATATCACAGATAATGCAATCTA---TCCGTCTTTGAGAGAATATGGCTGTTATCAACTAGCTCTCTAAGGTTCAGAG-TGAAATACGTTTCTCCTTATTTCTGTAGCCGACTGTGGAGAAGAAGAGCGTCTTCTTTAGTGGTCAGTCTGATGTTACAGTACAGACTCTGCAGAGAGAGAGATACACGTTTAA----TGAAGAACAATTCTCTCTGGACATTAGAGCTAAGCCATTGCAGCAAAATCACTCCGCTCAGACTGATTTCCTATACCGATGCCAAGAAAATCTTATTCCGGGCATGTTTTGCAGTAGTATCTCCATGTGACCAGGGGAGGGCTCTTGGCACATCTTCGCCCAACCTGG----CAGGTGCG-----TGCAGAGGCACAGAGC-CACCCAGCGCTGC--CTGGTCCTGCGCCTCTTCCCCTTGCCTTGCCTCCCAGGTCCACCTGACGCACG-------------------GCTTGGGAATCAATGGG------------------AAGAGGGGC------------------------CGCTCGCTGGCAAGAGTGGCTTCTCATTTCCCCTCATTCCATTCCGTGTTGCTGTGGGTTAATTTGAGATTAATGGATAATTCTTAAAAATCACGTTTCAGTA-------GTTGCCTCCCTCTCCTTCCTGAACATTCATCTGCTATT---------AGCCCCTGGTAATTTAGCAAATATCAGTTGATTTAACCCTCTATGTCTTATCCTGCTGCAGAAACTCCTTGCCTTTAGCTG--AAAAGCGCACTTGGAAAATGCACTTGC-----TGAGATATGTATTGCAACAGCACTTGTTTTCATGTT-------AGGCTCTTGTACAAGTCCTGCTCCTTCCTGCACTCCAGAGAGGTGCCTGCCTCCCAGCTCTACTCCCTTGGCACAGGACAGAACAGAGCACTCAGTCTCTTCTTGCTGCCATTCACGACCACAATGGAGTTCAA--CCGCTTTCCGCATAGG-TGTACG-----TGACATCCTCTT-----GGATTTCATTCTGGCTGAAGGTATAAACCTTTTACAGAAAAGATTTTAATTTCACAATCCTACCATTAATGTCAATGTC--TTGTTCAACTTTAATGCTGAAAAACTATTAGAAAGAATTTAGAAACTTTTTTTCACAATATTTTTT---------TTTTCCATCCCAGGGAAACACAGTTTATTTAATGTACTATATTTTTTCCTCTCAATATTATTCCTTTCTGcttttcttctcttttcttctcactttttttctgtttctccttttctcctttcttttctGGAGCAGGCAGGTACAAGAAGGAAGGAGTCTTTTGTCAGCAGTCCTTTGAGTTAGAGTAGATTTCAGTGAGTCCTCACCATGATAGGATCATAAACTTACTGGGTTAAACCAAGCTAACTTTCCCTAAGCTGCCAAG-----------------------------TTTTAGCTGCACCATACATATATGTGTTTCCTTGTGCCATTTTCTTTTCTTGTAGTTTTGTTTTTCTTGATGACCCTGAGCTATGGCTTCTGTCTCATTCTTACCACTAGTCAACCTTCCTTGCTTTTGTGGTTTTGCCGATATAGGCCTCAAAGAAAAAATGGCAGAAGAGCACAAAGTAGCTGAGGTACATGAGAGAGGACCAGATGATATTCTGCACGTGGGAATGGCACTGGCCATGCTGCATCCAGGAGAAGACCAGATAGTTGATTACACAGCCGACCAACATCTGGGTGATCTGCGACAAGGTGATGAACATGGCAAACTTGCGTGAGACTCTGAAGCCAGCAGCCCGCAAGGCATAGTAAGAGTACATAACGGCGTGCACTCCATAGTTCATGGTCATAAACCAGCCACCGCCAGCCACCATGTCCTTGTAGGAATACCAAGAATAAAGTAACACAGTAATGTGGTGGTACCAGTGTAAGAAGATGAGCTTCTGTTTCCTAAGAATAATGAATATTGTATCTCCTGTAACAAAAAGAAAAA ...:.x.:.::xx..:...x.x:..xxx..x.xx...x:.....::x.::.:x.......x:..----.:..x:...:...:x....:.xx:...---------:.xx.....:.:......-..x....:..x.------------------------..x..x:.:.:....:..-..::.:.:x:.::.:....---.:.xx.x.:..........:.:x.......:x.........:x....xx-..::::.:....-:....::.:--...........:.......-:....:.x.x:.:...................:......................----....xx.....x..x:.----...:..:..x:........x.......x:..:.-....:.:.:..::::xx.x.....:--------.:.......:.......x....x.x.xx:........xxxx..xxxx::.x::....-------.xx:....:.:.:x.:..:.:...--...:.....x....:....x:::.x........x.:.x..x........:x:.....::..-----.......:....::..------..x.:.....:xx.:x......x....x.---........x....x...............:...x..x......x.-.........xxx........:.....:.....x...::x...:.---.::x.:...x.:...........x...x:..x.x.x.:.-.:..x.:.....-.:..:.x.x...:xxxx:.......x...:....xx:::x.:..x..:::......xxxx...:..:x-------x...xx...:::x:.x..x.x-----------.::....----...:.:.:..x.x.x.xx..:.------------..x...:x.:x..x.xx:.:.:x:..:...---------------....xx...:------------------....:x.......:x...:x:::....x:......:...x:x...:..:::.x:x:.:...----..::...:-----......::.....x.:-.x....::::.x.--x::.:....:.x:.--...::...xxx.---..x..::xx:.:.x:.x::.:.-------------------::....:..x:x...:.------------------::.......------------------------:.x..x::...xx:xx.xx:...:..:.x..::..x::.:x....:xx.::.x....x::x:xx:x:.:::xx.xx.:..x.x:..x.:.x.x.....:x::.-------....xx.x::.x..:..::::.x:x.x:..:.:..x..---------.....xx..:..:.x.:....--------::xx...:x..::..:...:.:::x:xx.:.....:.x.xx---..:.:..:--.:..::..x..x...---..x.x:...-----..:..:x..x::....-------:.....:...x:.-------..:x.....x:x....x:.-.x..::.:.xx::.:::.x:.:x.xx..:x.::xx:...x.:.-----------..x:x...xx.::x:.x.:::xx.x.xx...:.xx...::::xx:..:..x.:x.x.:..--.xx....:.x...:..-.x...:-----..:...:-....-----..x...x:..::x..-:..:.:..x.x.x..:..-------...x.xx.:::::::x::..x:....xx....xx.x::--.x.:..x.x....:..::x.x...--:........:...xx.x:xx..x.x:..:..xx:...:.x---------.:..:....::..:....::::::--.:...:.:-.x..:..........x.--:.:...x.xx::.:..:..x:...:xx..xx::..---..:.x:.....x:.:x.:...x:..:::::.x.:..:...:x.::..:..x.::::.:.x..:.....:::x.......x...x...x.:...xx.xx:................x.:.x.........................:...x....:.x.............xx.-----------------------------..............::------....x.....................x.:----.x..:..............................:x:....x.:::.x.....x...:.:...x...:...:x.x:..........:..............:...................:..................x..........x...:.....x.x...:..:..:......:..............x..........:.....:.::........x.:..:......:........x..........................x..x.......x...:..x..x..........................x...........x...........:.....:.....:..x..x..:..x........:........:........:..x..x.:......:........:........:.:......x........:.....x.........................x..x.x.....::.. 64M4D27M9D18M1I12M24D18M1I19M3D49M1D12M1D9M2D19M1I55M4I17M4D33M1I25M8D57M7D24M2I61M5I16M6I29M3I45M1I44M3D39M1I12M1D68M7I21M11I7M4D22M12I30M15I10M18I61M4D8M5D16M1D13M2D14M2I12M3I22M19D17M18D9M24D103M7D38M9D21M8I41M3I8M2D15M3I9M5D16M7I13M7D19M1I43M11I60M2D16M1D6M5D7M1I4M5D15M1I18M7I38M2D24M2I40M9D24M2I8M1I17M2I35M3I173M29D16M6I29M4I494M 1606/2384 67.4% 2540/94230402 0.0% 383/2384 16.1% 75379300 NA +14629 chr4 + 190214555 110059557 110059556 110059779 223 TATGTTGCTACAAAGAG----AGGGAGAGGAAATGGAAGAAGATACTCACCTAGTTCGGGTGCTTTGCTTAGCACAAATGCATAAGCCCAGAATTTGCTGACAGGTCCATTGTAAAAACCCTGGTCACAAACTGACTGCTTCAGGCCTTTGGTCATCAAAATGTACACCATATAAGCACCAGTTCGAAGAGCACCGAATATACTTCATAATGAAAAGAGAAAAGAAA chr4 - 94230402 34675105 34675104 34675329 59555074 59555073 59555298 225 TGTTCTGCTCTAAATAGGCATAGCAAGAAAAAGGGAGACAGGGTACTCACCTAGTTCAGGTGCTTTGCTTAGCACAAATGCATATGCCCAGAATTTGCTGACAGGTCCAATGTAAAAACTCTGGTCACACACTGACTGCTTCAGGCCTTTGGTCATCAAAATGTACAGCATGTAAGGAGCAGTTCGAACAGCACCGAATATACTT--TAAAAAAAAAAAAAGAGAAA .:.x:....x:...x..----..x:...::..:x.::.x.:.:..............:..........................x........................x.........:.........x.....................................x...:....x.x.........x................--...x:....:.:..:..... 17M4I184M2D20M 189/221 85.5% 225/94230402 0.0% 6/221 2.7% 75384452 NA +3973 chr4 + 190214555 110083928 110083927 110084054 127 ATATAGAGATATATATAACATGTTATATATGATATATATGATATAACATATGCCATATACGATATATAACATATGCCATATATGGTATATAACATATGCCATATATGGTATATAACACATGCTATAT chr4 - 94230402 3074715 3074714 3074835 91155568 91155567 91155688 121 ATATGGAAATATTTGTGT--TTTCATGTATGTTATATAAG-TAAAATACATGATATGTA---TTTGTGATTTATGTTATATATGGTATGTTACATGTACTATATATGTTACATGTCTTGTGCTTTAT ....:..:....x.:.:x--.x.:..:....x......x.-..x..:.:...x:..:..---.x.:.:.:x....::...........:.x....:.:.:.......x..:..:x.x::....x... 18M2D20M1D18M3D65M 84/121 69.4% 121/94230402 0.0% 6/121 5.0% 107009213 83205342 +3124 chr4 + 190214555 110084562 110084561 110084610 49 AGATATATATATATATATATATATATATTTTTTTTTTT----TTTTTTTTTTT chr4 - 94230402 4200275 4200274 4200327 90030076 90030075 90030128 53 AGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..............:.:.:..............::...----.......x... 38M4I11M 43/49 87.8% 53/94230402 0.0% 4/49 8.2% 105884287 84330268 +3076 chr4 + 190214555 110094379 110094378 110094467 89 TCTGTTTCTATTTTACTTAAAAAGAAATATATATATATATATATATATATATATATATATATATAATATATATAACATAATATATATTA chr4 - 94230402 88147167 88147166 88147255 6083148 6083147 6083236 89 TTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCA .:.x...:.x......x.:x..::.x............:.x.:.:...::::.:.:.:.:.:.:x.......x::x:x.::......:. 89M 55/89 61.8% 89/94230402 0.0% 0/89 0.0% 21947212 NA +12126 chr4 + 190214555 110105482 110105481 110105648 167 ATGAAAAAAA---CCTACCTGAAGACTGCAAGGGTCAGAGACCAGAGCACTAATGGCTTCCTCAGTTCAAACTTTGCTCGTTTATTCATTAGGTGCCGACCACCGAATATAAAGGCAGCATACAGAGCAGAAAACAGGAAAGATTTCTTCCTGCAA---ACAAGCAAACAAAA chr4 - 94230402 34692355 34692354 34692527 59537876 59537875 59538048 173 ATGAGAAGGAATGCCTACCTGAAGACAGCAAGGCTCAGGGACCAGAGCACTAGTGGTTTCCTCAGTTCAAATTTTGCTCGTTTATTCATTAGGTGCCGACCACCAAATATGAAGGCAGCGTACAGTGCTGAAAATAGAAAAGATTTCTTCCTGCAAAACAAAAACAAACAAAA ....:..::.---.............x......x....:.............:...:..............:................................:.....:........:.....x..x.....:..:..................---.x..:......... 10M3I143M3I14M 149/167 89.2% 173/94230402 0.0% 6/167 3.6% 75413127 NA +3208 chr4 + 190214555 110117887 110117886 110117927 41 AAAAAAAAAAAAAAAAAATATATATATATATATATATATCT chr4 - 94230402 69437739 69437738 69437779 24792624 24792623 24792664 41 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT .........x........:x..................... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 40680148 NA +3556 chr4 + 190214555 110120876 110120875 110120947 72 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGGCTTAGCCTCCCAAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:.........:.x...x.xx....:.....::...........:.:....x.:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 91923750 NA +7257 chr4 + 190214555 110153771 110153770 110153928 158 CTTCATTTAAAGTAGGATCCACAGAGCTCTCCAGTGTCATTCCTGAAATAACT----AGAAGTGGAATAATGGGCTATTTCTTACTTTGTAG--TTTCTAATGCAATGTAAGCAGCTTTACAAGGCTTAGCT-GTCCCCACTGCCCTAACAGCATTCTTTACTTC chr4 - 94230402 34714253 34714252 34714415 59515988 59515987 59516150 163 CTTCTTCTAAAGTGGGATCTTCTGCACTTCACAGTGACGTTCCTGAAATAACTTTGAAGAAG--AAATAATGAGCCTCCCGTTACTTTACAGGTTCTCTAATACAACATAAGCAGCTTTACAAGGCTTAGCTAGTCTCTGCTGACCTAACTGCACATTTCACTCC ....x.:......:.....:x.x.x:..::x.....x.:..............----.....--:.......:..:x:::x.......::..--.:......:...::........................-...:.::...x......x...:x:..:...:. 53M4I5M2D28M2I38M1I32M 119/156 76.3% 163/94230402 0.0% 9/156 5.8% 75439518 NA +3227 chr4 + 190214555 110158544 110158543 110158625 82 AGATATTGGAGAGAGATATATATATACATCTATATATATATGTATATATATACACACACACACATATATATACACACACATA chr4 - 94230402 45922235 45922234 45922312 48308091 48308090 48308168 78 AAATATCTGGAAGGAATGCAT-TCCACACCT---CATTTAAGTATATATATACACACACACATGTATTTAAAGACACACATA .:....:x.::..::..::..-.x:...:..---:..x..x.....................::...x..x.x......... 21M1D9M3D48M 58/78 74.4% 78/94230402 0.0% 4/78 5.1% 64236309 NA +3255 chr4 + 190214555 110158561 110158560 110158614 54 ATATATATACATCTATATATATATGTATATATATACACACACACACATATATAT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT .:..x.::...x......:::.:..:..x........:................ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 53507731 NA +3073 chr4 + 190214555 110158562 110158561 110158646 85 TATATATACATCTATATATATATGTATATATATACACACACACACATATATATACAC--ACACATATATACACGTGTATATATATAT chr4 - 94230402 4481679 4481678 4481764 89748639 89748638 89748724 86 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT-TATCTAGGTAT .:...:.::x.::.....x:.:...:...:.::...x...:......x:.:....x.--...:....:.....:.-...x..x:... 57M2I16M1D11M 58/84 69.0% 86/94230402 0.0% 3/84 3.6% 105676883 84537672 +3100 chr4 + 190214555 110158574 110158573 110158625 52 TATATATATATGTATATATATACACACACACACATATATATACACACACATA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .:.:.:...:....x.:.x...:.......:x.....:...:.......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 60743822 NA +3102 chr4 + 190214555 110158587 110158586 110158652 66 ATATATATACACACACACACATATATATACACACACATATATACACGTGTATATATATATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::...........:.:.:.....:.:x..x:.x..x.......:.xx:...:::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 43253740 NA +3158 chr4 + 190214555 110158587 110158586 110158645 59 ATATATATACACACACACACATATATATACACACACATATATACACGTGTATATATATA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .......x.....x.:.......:..:.:x.::.x::....x....:..:......... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 92637834 NA +3307 chr4 + 190214555 110158591 110158590 110158673 83 ATATACACACACACACATATATATACACACACATATATACACGTGTATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 7596413 7596412 7596495 86633908 86633907 86633990 83 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCT ...:.x.::..:...x..:...........:...:......x:::....:x..:::.:::.:::x:...:...x.:....::. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 102562178 87652377 +3060 chr4 + 190214555 110158626 110158625 110158678 53 TATACACGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735348 92735347 92735400 1495003 1495002 1495055 53 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG .::.:.:x.:...:...:..:.:...............:.x.........:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 17423278 NA +3247 chr4 + 190214555 110164914 110164913 110164988 75 CTACAACCTCTGCCCCCCAGGCTCAAGCAATCCTCCCACCTCAACCTCTCGAGGAGCTGGGACTACACGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC .....:..:xx:x.::.::..:.....::x.:.x.xx:x....:...:..:..x......:.............. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 91967788 NA +3020 chr4 + 190214555 110169219 110169218 110169255 37 CAGAGTTTTGGGGTTTTTTGTTTTGTTTTTTTTTTTT chr4 - 94230402 28271104 28271103 28271140 65959263 65959262 65959299 37 CAGAGTTTTGTGTTTTTTTGTTTTGTTTTTTTTTTTT ..........x.x........................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 81898115 NA +3797 chr4 + 190214555 110176238 110176237 110176310 73 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..:.::..........x...x.xx.x........:............:......x.::.. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 91979112 NA +3042 chr4 + 190214555 110186800 110186799 110186855 56 TCTCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTATATATATA chr4 - 94230402 69437735 69437734 69437789 24792614 24792613 24792668 55 TTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT-CTTACATAAGTA .:.x.........x........xx...................-:...:...x:.. 43M1D12M 46/55 83.6% 55/94230402 0.0% 1/55 1.8% 40749065 NA +3331 chr4 + 190214555 110186806 110186805 110186893 88 AAAAAAAAAAAAAAAAAATATATATATATATATATATATTTATATATATACACACACAAATATATACATATATACACATATATATATA chr4 - 94230402 64360120 64360119 64360206 29870197 29870196 29870283 87 AAAAAATGTACAAAAAAATTAATATGTGTTCATAGCAGTCCATATATATACACACACACATATATAAAC-TATTCATGTGTGAATATA ......x:x.x........xx....:.:.x:...xxx:.::.................x.......x.:-...x..::.:.:x..... 69M1D18M 62/87 71.3% 87/94230402 0.0% 1/87 1.1% 45826686 NA +3009 chr4 + 190214555 110186810 110186809 110186870 61 AAAAAAAAAAAAAATATATATATATATATATATATTTATATATATACACACACAAATATAT chr4 - 94230402 72265229 72265228 72265289 21965114 21965113 21965174 61 AAAAAAAAGGAAAATTGATATATCTGTGCATACACAGACATATATATACACACTATTATAT ........::.....xx......x.:.::...:.:xx.:.......:......x.x..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 37921581 NA +3340 chr4 + 190214555 110186840 110186839 110186902 63 TATATTTATATATATACACACACAAATATATACATATATACACATATATAT-----ATACATATATAT chr4 - 94230402 50941868 50941867 50941935 43288468 43288467 43288535 68 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTAT ..x..:.x.......:....x...x......:...x......::.......-----.......::... 51M5I12M 51/63 81.0% 68/94230402 0.0% 5/63 7.9% 59244972 NA +3044 chr4 + 190214555 110189598 110189597 110189631 34 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAA chr4 - 94230402 87676347 87676346 87676380 6554023 6554022 6554056 34 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA ...............:.................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 22513251 NA +3260 chr4 + 190214555 110189600 110189599 110189640 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAAGAAGAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............................:..x..x... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 22513253 NA +9584 chr4 + 190214555 110193865 110193864 110194066 202 GGGAGGGTTTCATGAAGTTCTAGGCAAGCCCTTTGAAGACGTCACCTCACATACATAATGTTACAGCAGTCAGCACAGGCCTCCTGCTTTCCTATTGGTGGGCACCGTGTCAGCCGACATCAGAAGATAATCATCATTGGCTAGACAATTACAACTGGAGCAACTAGCATCCACTGCTGTTAGCACAAACCTGGCAGGCTGC chr4 - 94230402 34732769 34732768 34732968 59497435 59497434 59497634 200 GGAAAAGTTTC-TGTGATTTTCGGCAAGCCCTCGCCTGACGTCACCGCAGGCAGATAATCTCGGCGCAGTCAGCACAGGCCTCCTGCCTCCCCATTGGCGAGCCCCTCGTCAGCAGACATCTGAAGATAATTATTATTGGCCAGACAATTATAACAGGAACAACTGTCACTCGGTGCCGAT-GCCCCAACCTGGCGCTCTGC ..:.::.....-..x::..:.x..........:xxxx.........x..x::.x.....x.::xx......................:.:..:.....:.:..x..x:......x......x.........:..:......:.........:...x...:.....:x..::.:x...:.x.-..x.x........:xx.... 11M1D169M1D20M 148/200 74.0% 200/94230402 0.0% 2/200 1.0% 75461096 NA +5368 chr4 + 190214555 110198193 110198192 110198327 135 CCGGGAAGACGCGCAGGGCTCCCGGGAACAGTATCAGGCGAAAGCATCACGTACCAGTTTTCCTGCATCCATTGGATGGCTTCATTCTCGTTGAACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGAC chr4 - 94230402 34736104 34736103 34736226 59494177 59494176 59494299 123 ccgcggggccgcgcagc-cggccgggcTCAGCGCCGG----------CACTCACCAGTTCTCCTGCATCCACTGGATGGCCTCATGCTCGTTGAAA-AAGGCTCGAATTCGTATTCCTGCAAAGTCAACACGGAC ...x.::.x.......x-.xx.....xx...:::.:.----------...x:.......:...........:........:....x.........x-:xxx:........:.....:..:...........x... 17M1D19M10D49M1D38M 94/123 76.4% 123/94230402 0.0% 12/123 9.8% 75462089 NA +3431 chr4 + 190214555 110201204 110201203 110201286 83 CTGCAACCTTTGCCTCCTGGGATCAAGTGAGTCTCCTGTCTCAGCCTTCCAAGTAGCTGGGATTACAGGAATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:..:..:xx:x..:.....x.......xx..x.xx.x.........:...........:.:....x.--..::....::.. 69M2D12M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 92004078 NA +3114 chr4 + 190214555 110204290 110204289 110204350 61 AAAAAAAAGAAAGAAAGAAAAGAAAAGAGAAACATCTACACTGTACTTTTTTTTTCTGGAA chr4 - 94230402 58556326 58556325 58556386 35674017 35674016 35674077 61 AAAAAGAGACAGGAAAGAAAAGAGGAAAAAAAAATGTACACTGCACTTTCAGTTTTTGAAA .....:.::x.:...........::.:.:...x..x.......:.....:xx...:..:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 51647964 NA +3038 chr4 + 190214555 110213901 110213900 110213937 37 TCTCAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 - 94230402 76845954 76845953 76845990 17384413 17384412 17384449 37 TCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ...xx................................ 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 33367947 NA +3053 chr4 + 190214555 110213904 110213903 110213937 34 CAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA chr4 - 94230402 87676346 87676345 87676379 6554024 6554023 6554057 34 CAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ................:................. 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 22537558 NA +3144 chr4 + 190214555 110214677 110214676 110214745 69 AAAATTAACTGTCACACTTGGACAAATCCCTTCACCTTTCTGGGCCTCAGTTTC----CCTATTATGAAATGA chr4 - 94230402 1932232 1932231 1932304 92298099 92298098 92298171 73 AAGGTTTACCACCACCTGTGGGCAAATCACACCACCTTTCTGTGCCTCAGTTTCCCCACCTGttaaaaaataa ..::..x..:::...x:x...:......x.x:..........x...........----...:...x:....:. 54M4I15M 51/69 73.9% 73/94230402 0.0% 4/69 5.8% 108282445 81932110 +3066 chr4 + 190214555 110233715 110233714 110233765 51 TGTATGTATGTGTATGCACGTGTGTGTGTATGTGTGTGTATGTATGTGTAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ....x..x...:...:...........:.:..x.x....:.....:.:... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 62144218 NA +3067 chr4 + 190214555 110233908 110233907 110233974 67 GTGTGTATGTGTCTGCGTGTGTATGCGTATGTGTGTATGTGTATAAGTGTATATGTGTATGTGTATA chr4 - 94230402 39267142 39267141 39267208 54963195 54963194 54963261 67 GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA ..:.:x......x.::.x.:.:.:.:.xx.......:...:....:....::..x......x:.... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 70966766 NA +3167 chr4 + 190214555 110234166 110234165 110234219 54 ATGTGTGTATATATGTGTATGTGTGTATGTTTATGTGCGTGTGTGTGTATGTTG chr4 - 94230402 19704280 19704279 19704333 74526070 74526069 74526123 54 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTG ..:::.:....::.:.:...x..........:.....:.........x..x... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 90529886 NA +4032 chr4 + 190214555 110254302 110254301 110254384 83 CTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCACGCCTCAGCCTCCCAAGTAGCTGGGACTATAGGCACGCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.............x...x..x.x........::...........:....:.--.::..:....::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 92057176 NA +3099 chr4 + 190214555 110294080 110294079 110294145 66 CTCCAAGGTTGAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.x:....x.....x...x..x.x........::::.........:.:....--:...:..... 54M2D10M 48/64 75.0% 64/94230402 0.0% 2/64 3.1% 92096941 NA +3068 chr4 + 190214555 110300605 110300604 110300658 54 AAAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAGAAGGGCCTGAATTGGGGGAA chr4 - 94230402 4077736 4077735 4077789 90152614 90152613 90152667 54 AAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCAAGAAGAGGGAA ..............x.:.....:.:.....:.....x...:::.:xx.:..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 106222869 83991686 +3122 chr4 + 190214555 110314860 110314859 110314921 62 AGAAGAAGAGGAAGAGGAAGAAGAAGAAGATGAAGAGAAGGAGGAGGAGGAGGAGGAGGAAA chr4 - 94230402 59322149 59322148 59322210 34908193 34908192 34908254 62 AGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAA ...:.....x..x..x...x.x.xx.:x...x.....:.:....x...:............. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 50992711 NA +3821 chr4 + 190214555 110415383 110415382 110415466 84 CTGTAGCCCTGAATATCAGGGTTCAAGTGATCCTCCCATCTCAGCCTCCCAAGTAGCTGGAACTACAGATGGGCACTACCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTGT ..::.....x:.::x..x...........x.:.x.xx:x........::.................--.:.x....:..::... 66M2D16M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 92218257 NA +3003 chr4 + 190214555 110419879 110419878 110419930 52 TGAGGTGTGTGTGTGTGTATGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 36609693 36609692 36609744 57620659 57620658 57620710 52 TGGGGTTTTTTTGTGTGTGTGTGGGTTTTTTTGTATTGCTTTTTTTTTTTTT ..:...x.x.x.......:....x........x.x..x:............. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 73810186 NA +3679 chr4 + 190214555 110424702 110424701 110424762 61 CTCCCGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.:.........x...x.xx.x........::.:.........:......x...... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 92227563 NA +3441 chr4 + 190214555 110440192 110440191 110440285 94 TTTTACTAAACAATGCAATTAATACTAACAGCAACACTGAGAGGTAGGTACTATTTTTTCTTTTCTTTTTTTTTCTTTTTCTTTTTTTTTTTTT chr4 - 94230402 2972425 2972424 2972511 91257892 91257891 91257978 87 TTTTGCTAAA-------ACAGATTTTTACAGTAACACTGAAGCAAATCTACTCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTTT ....:.....-------.:x:..x:.x....:........::x:x.xx....x.....::.............:......x:..:::.x..... 10M7D77M 62/87 71.3% 87/94230402 0.0% 7/87 8.0% 107467767 82746788 +3053 chr4 + 190214555 110445550 110445549 110445609 60 CATATGCGCGCACACACACGCGCGCGCACACACACACACACACACACACACACACGGACA chr4 - 94230402 84262009 84262008 84262068 9968335 9968334 9968394 60 CATGTGTGTGCAAACACAAAGGTGTGCACATGCATACACACACACTCACAGGCATGCACA ...:..:.:...x.....x:x.:.:.....::..:..........x....x:..:.x... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 26183541 NA +3126 chr4 + 190214555 110463834 110463833 110463891 58 GTTTTTTTGTTGTTTTGTTTTGTTTGTTTGTTTTGAGATGGAGTTTTGCTCTTGTTGC chr4 - 94230402 88232987 88232986 88233044 5997359 5997358 5997416 58 GCTTTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTAAATAAAAGTTTTCATTTAATAC .:......x.........................x.:..::.:x...x.x:..:x.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 22230847 NA +3185 chr4 + 190214555 110465900 110465899 110466000 101 CCTAAATAT-AATTACCTTAACTCCCATCTGTTTCTATGATATTCTGAAGTACAAATAAAATTATCTTTTGGAAAATAAAATAAGGA------GTTACAGTACCTGAG chr4 - 94230402 86543511 86543510 86543618 7686785 7686784 7686892 108 CTTAAATACCAATTATACTAATTCTCCAGTGTTTCTGTGAGATTTTGAAGTACACGGAAAATAATCCAGAAAAAAATAAAAACAAAAAACCCGGGCACAATATTTGAG .:......:-.....:x:...:..:.xxx.......:...x...:.........x:x.....x...:xxx::.........xx.::.------.x:...:..::.... 9M1I77M6I15M 69/101 68.3% 108/94230402 0.0% 7/101 6.9% 23922389 NA +3630 chr4 + 190214555 110471261 110471260 110471330 70 CCTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGAATTACAGGTGCCCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .:............:.x...x.xx.x........:::............:....x...--......:::. 58M2D10M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 92274122 NA +24259 chr4 + 190214555 110475926 110475925 110477188 1263 AACACAACAGGAAGAAGCCCCAGGCTGAGTGGCAAAGGTTGAGATTTTCTATCGTAAGCACACCTCACCCAAACGCTTGCTCCCT--GAAAGCTGCTGACGGAGCTTTGGCGAGGGCTCATCCTCCCGTTGGCTGATAAGCGAAGCCCTGTTTTATATTTAACTCGCTGCAGTGCAGGAGGGG-TAGGGGTGGAGATGCGTCGTTTATAAGGGGAGCT-----GTGACAATCTTCTTGCCAGCCCTCTTCCTCCCACTCGGCTCCTCTTACGGAGTCC---TCATTCCACCCCCCTTGTTTCC-------GCAT-TCATCCT---------GAGTGGCTGGTGGGAACGTGAAAAGGGAGAGGAAAAGGCGCAAGAAGCCAGAGAGAGGGGTGTGGGAAAAGCGAAAACAGGCTGCCAAATCAGGGGATTCCTTCCAATTTA--AAAAGGAAGTCTGCTGACGTTAGTTAGTTAAATTTAACATCTTTTTATGTGTAACACTT------GACTTTGGAAGCAAAA--------ATGAACTTTGCGGAGAGAGAGGGCTCTAAGAGATACTGCATTCAAACGAAACATGTGGCCATTCTCTGTGCGGTGGTGGTGGGTGTAGGATTAATAGTGGGACTTGCCGTGGGCTTGACCAGATCGTGTGA--CTCCAGCGGGGACGG-CGGGCCGGGCACTGCGCCAGCTCCTTCCCACCTGCCTTCTTCCACGGCCAGCCCCTCAGGTCCTCCTGCCCAGGACCAGGACATCTGCCCGGCCAGTGAGGATGAGAGCGGACAGTGGAAAAACTTTCGACTGCCGGACTTCGTCAACCCAGTCCACTACGACCTGCACGTGAAGCCCCTGTTGGAGGAGGACACCTACACGGGCACCGTGAGCATCTCCATCAACCTGAGCGCTCCCACCCGGTACCTGTGGCTGCACCTCCGGGAGACCAGGATCACCCGGCTCCCGGAGCTGAAGAGGCCCTCTGGGGACCAGGTGCAAGTCCGGA---GGTGTTTCGAGTACAAAAAGCAGGAGTACGTGGTGGTCGAGGCGGAGGAAGAGCTTACCCCCAGCAGTGGAGATGGCCTGTATCTCCTGACCATGGAGTTCGCCGGCTGGCTGAACGGCTCCCTCGTGGGATTTTATAGAACCACCTACACGGAGAACGGACAAGTCAAGTAAATATTAATTTTTGCTTTACCT-----CCCTTAAGCTCACATATCTGCTTTCCATTTCTTTTCCTTT--CCTTTTCACTTTC-------CGCTTTTAATTATTTTGTTGGTCTGATATTGATCGGCTCTTGGTTTCAATTC chr4 - 94230402 34800482 34800481 34801707 59428696 59428695 59429921 1226 aaaaaaaaaGGAAGAGGT---------AGTGGCAAAGGTTGAGGCTTTGGA--GCAGTTACACCTCTATC---TGTGAACTCCTTCAGAAAGCTGCTGACAGAGCTTTGGCATCTGATCATC-TCCTAACTGCTGATTAACATAGCACTGTTTTATATTTAACTCAGGCCAGAGCAGGAGGGGCTGGGGGTGGGGTTGAGTTGCTTAAAAGGGGAGCGCAGCAGGAACAATGTTCTT-----CTGTGTTGGTTCC-CTCGGTCTCTCTGCCCAGCTGCATGCCTTTTGATCATTCATGTTTCCTCTAAATGCATGTTATCTTTAATTAATTGAGTGCCTTGTGGAAA----GCAAGGTGGGGGAGA-------------CAGACAGAGAA---CAGCTACAGCACAATTAATGTGC-AAACCAAG----TCTGCTGAGTTTACTGAAAATAAGT--GCTGAAGTGACTTA--TAAGCTTTACAT-GGTTCATGTTTTGCTCTGAAAACAGACCTGGGAACCGAGATGGAAGACATGGATTTTGAGGATAAGAAG---TCCAAGAAGTACTGCATCAAGACAAAGCACACGGCTATCATCTGTGGCGTTGTTGTTGTTGTAGGTCTTGCTGTGGGTCTTGGTGTGGGATTGAGCAAACCCCAGCAATCTCCAGAGTACACAGACCAGCCGGA---TCAGCCAGCAACTTCTC---------CTCCCACAGTGGAT---GCAGGTCC---------------------CTGTCCTGCTAAAAGTGATGAGTCTGGAGACTGGAGAAATTTCAGGCTACCCACCTATGTGAACCCTATCCACTATGACCTGGAAGTGAAGCCTGAGATGGAGACAGACATTTACACTGGGACAGTCAATATTTCTATTGCCTTGGGACAACCAACCAGCCACCTGTGGCTCCACCTGAGGGAGACCAAGATTACAGAAATGCCTACACTCCGGAAATCCTCAGGACAGCAAATT---GCTCTGACTGACTGTTTTGAGTACAAGGCACAAGAGTACATAGTGATGAAGGCAGAAGTGGAACTTACTGTCACTGATGAAAGTGATCCCTATATACTCACCCTGAAGTTTCAAGGCTGGCTGAATGGTTCCCTGGTTGGCTTTTATAGGACCACCTACACTGAGAACGGAGAGACTAAGTAA--AGCAGATTTTATTTTATTTATTAAACTTTATTCTC-TATTCCTGCTTTCTAAGACCTGCTCTTTTCCCATGTCAGCTTCTCAGACTTGTTTCTCACCAACTTG-----CTGACATTTCTGAGCTGTTCTTTCTCATTC ..x.x..x.......:.:---------................::...xx.--.:.:x:.......xx:.---:.:xx:....:.--.............:..........:xxx.x.....-...::x:x......x.:.:x...x..................:xxx...x..........-.:.......:.x..x..:.:...x.........x-----.x:.....x.....-----.:x.x..xx.:..-.....:::....xx.x::x.x.---:.x..:x.:.x::.x.......-------....-.:...:.---------.....x..x....:..----:x....x:.:...:.-------------....x....::---::.xx.x...:x..x:.:xx...-...:..:.----..:x::x.:....--:...:x....--.....x..x.x...--...::..x....-xx..:....x.x:.x..x------...:.x....x.:.:.--------...:.:....x...x.:::..---..:....::........:x.:..:..:..:::...:..:x......xx..x..x..x.x......x:.x::x.....x....x:.....x....x..:.:.x::xx.--......x.x:x..:.-.x:.....:---.xx......xx....:.---------..:....:.:x:::---x.......---------------------...:..x..:.:x::x......xx:...x.x....:...:..:x.:..:..x:x..x:..x.....x:.......:......x.x........:xx.x.....:x:....::.....x..x..x..x.::..:..:..::x.:..:.xxxx..x...x.x:..........x.....xx.........:...:..xx::x.x..x:x:..xx:..:::....x..:x.x..::.x---.::.x..---:x.....:........::x:..:......:.:...:.x:....:..:.x:..:.....:x:..x:::..:.::..::.:x...x.x..x...x..:....:xxx...........:..:.....x..x..x........:...........x.........x.::::......--.x:.:x....::....::.-----x.:...xx...-:..x:........:.xxx.:.x::....--..x.x...x:...-------:.:..:.x.::.x:...-----....:...xx.x:...x..xx..::x.... 18M9D24M2D17M3D12M2I35M1D60M1I34M5I14M5D13M1D22M3I22M7I4M1I7M9I16M4D15M13D11M3D23M1D8M4D13M2I10M2D14M2D12M1D18M6I16M8I21M3D107M2I15M1I9M3D17M9D14M3D8M21D235M3D7M3I173M2D19M5I11M1D28M2I13M7I17M5D30M 771/1162 66.4% 1226/94230402 0.0% 165/1162 14.2% 75675444 NA +10950 chr4 + 190214555 110488526 110488525 110488720 195 TTGTTTGTTTCTAAGGAGCATAGTGGCCACCGATCATGAACCAACAGATGCCAGGAAATCTTTTCCTTGTTTTGATGAGCCCAACAAAAAGGCAACTTATACAATATCTATCACCCATCCCAAAGAATACGGAGCACTTTCAAATATGCCAGTGGCGGTAAGTATTTTTTAAATGTTTTGTTTATGCAGAGAGTC chr4 - 94230402 34806470 34806469 34806660 59423743 59423742 59423933 191 TTGTTTGTTT--AAGGAGCATTGCAGCTACTGATCATGAACCAACAGATGCGCGGAAATCATTTCCTTGCTTTGACGAGCCCAACAAGAAAGCAACTTACACTATATCTATCATCCATCAAGACACATATGGAGCACTTTCAAACATGCCAGTACAGGTATGTATTTCGCAACTCTACTGCCTA--CAGGGAATC ..........--.........x.::..:..:....................xx.......x........:.....:...........:..:........:..x..........:.....xx:.x:x...:..............:........:xx....x......:x:..x.x.x:..::..--...:..:.. 10M2D172M2D9M 153/191 80.1% 191/94230402 0.0% 4/191 2.1% 75682056 NA +8376 chr4 + 190214555 110490981 110490980 110491186 206 TATATATGATTGATATTTTGATCGATAAAAGTTTATCTTTTCTTTTCAATAGAAAGAAGAGTCAGTGGATGATAAATGGACTCGAACAACTTTTGAGAAGTCTGTCCCCATGAGCACGTACCTGGTGTGCTTTGCTGTACATCAATTTGACTCTGTAAAGAGAATATCAAATAGTGGAAAACCTGTGAGTCTCATTATATTTTAAA chr4 - 94230402 34809027 34809026 34809227 59421176 59421175 59421376 201 TGCATATGTTTGCAATTTCAA--AATCAA---TTCTTCCTTCATTTCTGCAGGAAACTGTCTCACTGGGTAATGGCTGGAATCGGACAACTTTTCAGAAGTCAGTTCCCATGAGCACTTACTTGGTATGCTTTGCAGTGCACCAGTTTAAGTGGGTAGAGAGAAGATCTGATAGCGGAATACCTGTAAGTTCTATTACAGATTAAA .::.....x...xx....::.--:..x..---..x.:::...x....x::..:..:xx.xx...x...:.:..::x....x...:.........x.......x..:...........x...:....:........x..:..:..:...:.x.xx...:......x...x:....:....x......:...:::....:.xx..... 21M2D6M3D174M 143/201 71.1% 201/94230402 0.0% 5/201 2.5% 75681954 NA +8077 chr4 + 190214555 110506577 110506576 110506809 233 TTTTGTATTTTGTTGAATGAAGAATAATTTTCACTGAATTTTTTGTGTTTTGTTTAATAGCTTACAATTTATGTCCAGCCAGAGCAAAAGCACACAGCCGAATATGCTGCAAACATAACTAAAAGTGTGTTTGATTATTTTGAAGAATACTTTGCTATGAATTATTCTCTTCCTAAATTAGGTGAGGATCATTTTTTAATTTTCTTATTT--TTAAT--ATTGCCTTTGTTTTTATC chr4 - 94230402 34812927 34812926 34813156 59417247 59417246 59417476 230 TTCTGGTTCCTCTTAACTGAAAGCTACTCT------AATTGTTTCT-CTCTATTTTACAGCTGAGAGTTTACGCCCAGCCACAGCAATTACACACGGCAGAGTACGCAGCAAATATAACAAAAACTGTGTTTGACTTCTTTGAAAAGTACTTTAATTTGAGCTACTCTCTCCCAAAACTAGGTGATTATTAGTACTTACATTTTTCATTTTGTTAATTCACTGTCATTATGTTTCTC ..:..xx.::.x..:.x....::x..x.:.------....x...x.-:.:.:...x.:....x.x.:....:.:.......x.....xx:.....:..x..:..:..x.....:.....x....x.........:.x:......:.:......:x.x...::..:.....:..x...:.......xx..:.x.x:...xx...:.:....--.....--.:..:.x..:.x...x.. 30M6D10M1D163M2I5M2I18M 159/226 70.4% 230/94230402 0.0% 11/226 4.9% 75693650 NA +3026 chr4 + 190214555 110508083 110508082 110508163 81 AATTTATTACTCTCTTCTCCTCTCTTTCTTTCTCCCTCTCCCCAACTCCTTTATTCTGTTTTATGTGCATTTTCAACCCTC chr4 - 94230402 37303290 37303289 37303370 56927033 56927032 56927113 81 AGTCTGTTGCTTTCTCCTTCTGTCTTTCTTTCATTCTTCTCACAAAACTTTCCATTTGTTTTCTTGGTATTTTCATCCTCC .:.:.:..:..:...:..:..x..........x::..:::.x...xx.:..:xx.:......x.xx.:.......x..::. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 73204793 NA +17387 chr4 + 190214555 110509589 110509588 110510362 774 GTAAGAAAAGCTATGAACAAATGGAAAGAATGTATTTC--------------------------TCACTGGACTCTTTCTTCTTCTATAGATAAAATCGCTATTCCAGATTTTGGCACTGGTGCCATGGAGAACTGGGGACTCATCACGTACAGAGAAACGAACCTGCTTTATGACCCTAAGGAATCAGCCTCATCAAACCAACAGAGGGTGGCCACTGTGGTTGCCCATGAACTTGTGCATCAGGTACAGAATCTTAGCACTGAATCAGCTTGTTTTTTTAAAGTGGCTTAAGACCACAGGAATAATT-------------------------CAAATTATTTATGACTTA------------------------------GCAAATA-------AAAAATAGCC--------AACT-------CAGAAAAACT----TGCATGAAAATCTTTCTTGGTA--------------------------------CTAATAAACATTTAGCCATAAAGAGACTT---TGAACCACATTG----------TTTTGCCTTTAGG---------------AAATATGCAC----GAGGCCTTCATATAAATTTATGTACCCCAGT---AATAACTAAAT-AAAGGCAATAAACTAAAGACAATTT-AATATCATTTAAATAATCAG----------AATAA-------------AGCAGGAAATAAATGTTAAGT-----ACAATGCCTG-----CCACTTCTGTCACAG-------------------TGACAACA--TTGGCACGGACAAAT-----------AAATGTTTTGACATTTTCTAGGCCTCTCTACCATACCCATAAGAATGTAATTATCTCTTT-ATTGCTTATAATTTCAGTGGTTTGGAAATATTGTGACCATGGACTGGTGGGAAGACTTGTGGCTAAATGAAGGATTTGCTTCTTTCTTTGAGTTTCTGGGAGTAAACCATGCAGAAACAGACTGGCAAATGGTGA chr4 - 94230402 34815045 34815044 34816025 59414378 59414377 59415358 981 GCAGAACAGGTTATGAAAAAGCAGAAAGAGGGCAATTCAGCTGGCTTAAAAGATACGATAGTAATCAC-GTTCTCTTTCTTTCCATACAGACAAAATTGCTATTCCAGATTTTGGAACAGGTGCTATGGAGAACTGGGGGCTGATCACATACAGAGAAACAAACTTACTTTATGATCCCAACGAGTCTGCCAGTTCCAACCAACAGAGAGTGGCAGCTGTGGTAGCCCATGAGCTCGTTCATCAGGTATGG---TTTAGAAC----ACAGTTCA-TTTTTTAAAGTGTTTTAAATGCGTAGTAGCAATTTTTTTAATTGTGAAAACTGCATTAATTAATTAATTGCATCTCAGGATACTCTGTGTGTGCTCACACTTTGATTGCAAATACCACATTAAAACCACTCCCTGATAGAACTTTGTTACCAGAACTACTATACTGCCTTTGAATTTCTCTCAGGAAATTAGATGCTTGTGTCCATACGGTGAGCCAGCTTATGAAAATCTGTC--TGAAATGTCTTAAATGAACTAATTTGCATGTGCAGATGTCTCTTTTGGGCAAGCAAGTAGGAACAACTATACACTCCGGAGGCTGTC-TGAAAACATATCTGTACAAGCACAAATCATCAAATCAAAAGGAAGAAACTAAAAATATTTTCAGTGGCATATGAATCATTAGTGATCTCCCCAGTAATATGTAATCTTATAATAAAAAGTAAATTTTTAACATCAGACAAGGACTGAATTCCAATTTAAACCCCAGAATTAGGATAATTTTCATCTGGCAACAGCTGGAAATGTAAAAATGTGTAATACAGAAATGT----ACATTTACTA-----CTCAGC--------------TAAAACTACTTCTTTCAATGTTTATAATTACAGTGGTTTGGAAATATTGTGACGATGGACTGGTGGGATGACTTGTGGTTAAATGAAGGATTTGCCAGCTACTTTGAGTTCCTGGGAGTAAATATTGCAGAACCAGATTGGCAAATGGTAA .:.::.x.:.:......x..:::......:x.:.x...--------------------------....-.xx.........:::x..:...:.....:.................x..x.....:..............:..x.....:...........:...:.:........:..:..x..:..x...xxx..x...........:.....x:.......x........:..:..x.........::.---:....x..----x...:.::-............x:....:xx.::..x.::....-------------------------:x.....x..:::x..:.------------------------------.......-------....x:.x:.--------....-------.....xx...----...x.xx:...:.:...::.x.--------------------------------..x..:..x..:.:x.--.:..:x.x...---.....:.xx...----------.x.:x.:...:..---------------..x...:...----.....:x..-.:x...:x...x.::x.x..:---...x.::....-...:.x..x........:.:.x...-.:.:x...x.:...x..:..----------.:...-------------.::.::..:.....x..x.::-----....x.x...-----.x.:..xx::.x...-------------------..:.....--.x.:x.:.x.x....-----------......----......x...-----...x:.--------------.:x..:..::.....-.x..:........x.......................x..............x.........:................:xx:.x.........:...........:xx.......x....:...........:. 38M26I4M1D182M3D8M4D8M1D34M25I18M30I7M7I10M8I4M7I10M4I22M32I16M2D11M3I12M10I13M15I10M4I9M1D21M3I11M1I25M1I20M10I5M13I21M5I10M5I15M19I8M2I15M11I6M4D10M5D6M14D15M1I135M 550/739 74.4% 981/94230402 0.0% 277/739 37.5% 75694544 NA +7553 chr4 + 190214555 110513389 110513388 110513597 209 TCCTTTGGCTCATTCTTTCATTTCAGCGTGACCAAATGTTACTTGAAGATGTATTACCTGTTCAAGAGGATGATTCTTTGATGTCTTCGCATCCAATTATTGTGACTGTGACAACCCCTGATGAAATAACATCTGTTTTTGATGGAATATCCTATAGCAAGGTGGGAGAAATAGAACATTGTTTTGAACATCTTCCTGTTTAGTGACTT chr4 - 94230402 34817797 34817796 34817981 59412422 59412421 59412606 185 TCTTCTAACATCTTCTCTT-TTTCAGCTTGAACAGGTTTTAATTGATGATGTGCTTCCTGTAATGAAGGATGACTCTTTGCTTTCTTCCCACCCAATTGTGGTTGATGTATCAACCCCAGCTGAAATCACCTCTGTGTTTGATGGGATATCCTACAGTAAGGTAAG---------------------ACATCCTCCTG--CAGTGACTT ..:.:.::.x:x....:.:-.......x...x..::.x...x....x.....::.x.....xxx::.......:......x.x.....x..:......:.x..x:x...:x.......x.x......x..x.....x........:........:..:.....::.---------------------.....:.....--:........ 19M1D146M21D11M2D9M 137/185 74.1% 185/94230402 0.0% 24/185 13.0% 75695592 NA +3416 chr4 + 190214555 110517010 110517009 110517093 84 CTTGGC-TCAT----TGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCATGTCTCAGTCTCCCGAGTAGCTGGAATTACA--GGCACCAC chr4 - 94230402 18197112 18197111 18197202 76033201 76033200 76033291 91 CTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ......-....----.:..:..:xx:x..:.:.........:.x...x..x.x.....:..::.:...........:....--x....... 6M1I4M4I66M2I8M 64/84 76.2% 91/94230402 0.0% 7/84 8.3% 92319898 NA +7496 chr4 + 190214555 110520205 110520204 110520415 211 TCAATCTTAGGCAAGTAGGCTACCAGTGAAAGAAGTAATGGACACCTGGACCAGACAGATGGGTTATCCTGTGCTTAACGTGAACGGT-GTCAAGAACATCACACAGAAACGCTTTTTGTTGGACCCAAGAGCTAACCCTTCTCAGCCCCCTTCAGATCTTGGGTAAGGCTCTATAATGCAT-----TGAAAAAAACACAGAAATTTGGCAGAAATA chr4 - 94230402 34824365 34824364 34824580 59405823 59405822 59406038 216 TCATTCACAGGCAAGTAATAAACCTGTGAGTGAAGTCATGGACACATGGACAAGGCAGATGGGCTACCCTGTTTTGGAGATGGGAAGTAATTCAGTAC-TCACACAGAAACGTTTTCTCTTGGATCCCAATGCAGATGCTTCTGATCCTCCTTCTGATCTCGGGTAAGACCCTACTGTAAATATCTGTCCAAAACAGGTAGAAATCCTGTACAGATA ...x..x:.........:xxx...x....:x.....x........x.....x..:........:..:.....x:.x:.x:..::x:..-:.:x..x..-.............:...:.x.....:..x.:x..x:.:x.....x.x..:.....x.....:.......:.:...:x:.:x..-----.xx....x.x::......::x.:.x.:... 88M1I9M1D83M5I30M 145/210 69.0% 216/94230402 0.0% 7/210 3.3% 75695840 NA +3888 chr4 + 190214555 110531130 110531129 110531300 171 GATTTTTACTCTTGAAATTTTATCTTTTAGTAATAAAAGTTAAATTTTTCTTT---TTAAAAAAATTTTAGTTATACATGGAATATCCCAGTTAAAT--GGACTGAAGATAATATAACAAGCAGTGTGTTATTTAATAGGTCAGAAAAAGAAGGTAAATATTATTAATTGATTTAT chr4 - 94230402 34827985 34827984 34828152 59402251 59402250 59402418 168 GAGTTTTATTTTTAGCATTTGATTTCA----AATATAATTTGA--TTCTCTTTCCCTTTAAATAATTTCAGTTACAAATGGAATATACCAGTGAAATGGGGACTGGGG--AATTCAACAAATTACACGTTCTACAACACCTCTGATTCTGCAGGTAAACTTCCTTGACTCTTTTAT ..x.....:.:..::x....x..:.:x----....x..x..:.--..:.....---..x...x.....:.....:.x.........x.....x....--......::.--...x:.....::x::::...x.x:..:.xx..x..xxxx.x.......:x.:x..:.:.xx..... 27M4D12M2D8M3I41M2I9M2D66M 111/163 68.1% 168/94230402 0.0% 13/163 8.0% 75703145 NA +3047 chr4 + 190214555 110538845 110538844 110538923 79 GGAGTCCCAAGGGGAAGGAGAGAGAAAGAGAGAGAGAGAGAGAGAAAGAGAAAGATAAAAAGAGAGACAGGGGAATGGC chr4 - 94230402 33386346 33386345 33386424 60843979 60843978 60844057 79 GGAGAGCAAAGGGACAGGAGGGAGAAAATGGAAAAAAGCGAGGGAGCAAGAGGAAAGGAACAAGAGAAAGGGATATGGC ....xx.x.....:x.....:......:x.::.:.:..x...:..:x:...:::.x::..x:.....x....:x..... 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 77152499 NA +6738 chr4 + 190214555 110542724 110542723 110543072 349 CTCATTAGTGTTTATTTACTACTACAGGAATCACTTTGAACTCCTCTAATCCTAGTGGAAATGCTTTTCTCAAAATAAACCCAGATCATATTGGGTTTTATCGTGTAAATTATGAAGTAGCAACTTGGGACTCGATAGCTACAGCGCTCTCCTTG-----AACCACAAGGTAAGAGATAGCAATGGTTGGAAACTTTTATTTTTG--TTCTAAGAACAGCATCTTAA-------TGATATTAATTTTTTTCAACATGCTTTGCCTTAAGAATTGTGTTTTTAT---CTCTCTTTCTCCCTCTTCCCAGACATTTTCTTCAGCAGATCGTGCAAGTCTTATTGATGATGCTTTTGCCTTGGCAAGGT chr4 - 94230402 34828436 34828435 34828771 59401632 59401631 59401967 336 CTAATCACTGTTTGTTTGTTTTT-CAGGAATTACAATAACATCATCTTCT---------AATTCCTTTCTGAACATTAATCCAGACCACATTGGATTCTATCGTGTGAATTATGATAGTCAAAATTGGAACACATTA-----AGCACTCTTCTGGTCAACAACCACGAAGTGAGTG-TCACAATATT----AACCTGTCTGGTTGGCCTCTAACAGAGGTTTATAAAGACAGGTTGTTTTTTTTTTTTCTGCAAATGATCCA----------TGTATTCTTGATGACTCTCATTCTCTTTTTGTACAGAATTTTTCAGCTGCTGACCGTGCAGGGATTTTGGATGATGCCTTTTCCTTAGCAAGGT ..x..:.x.....:...::.x:.-.......:..xx.:.xx..x...xx.---------...x.:.....x..x..x..:.....:..:.....:..:........:........x:xxxx..x....:..x.:x..-----...:....:..x.-----......:.:..:..x.-.x:....:x.----...:.x.x.xx...--:.....x.:x:.:x.x.x..-------..x.x..xx.....:.xx.x...x.:::----------...:..:..:x---.....x.....::.:.x:x....xx.....xx.x..x..:......:.xx..x.x........:...x....:....... 23M1D26M9D78M5D13M5I16M1D10M4D14M2I20M7I28M10D11M3I80M 217/319 68.0% 336/94230402 0.0% 47/319 14.7% 75714288 NA +6701 chr4 + 190214555 110548155 110548154 110548332 178 TTTTTTTTTTGTCTTTCTCAGAGCTCAACTTCTAGATTATAAGGTGGCTTTGAACTTGACCAAGTATCTCAAAAGGGAAGAGAATTTTTTACCATGGCAGAGAGTAATTTCAGCTGTAACCTACATCATTAGCATGTTTGAAGATGATAAAGAGCTATATCCTATGATTGAGGTGACG chr4 - 94230402 34829563 34829562 34829740 59400663 59400662 59400840 178 TTCTGTTTTCTCCGTTCTCAGAGCTGGACTTGTGAATTACTCTGTCCCCCTGGAGCTCACAAAATACCTAATAAATGAAACAGATTATTTACCTTGGCACAGAGTTATATCAGCTGTGACTTACATCGCAGACATGCTTGAAGACGATACAAATCTCTATCTCCGGTTTCAGGTGATG ..:.x....:x:.x...........x:....x.::....:xxx..xx.::..:.x:.x..x..:..:..x.x..:x...:x::...x......x.....x.....x..x........:..:......::x::....:.......:....x.:.x..x....::xx.x..x......:. 178M 119/178 66.9% 178/94230402 0.0% 0/178 0.0% 75718592 NA +15567 chr4 + 190214555 110549335 110549334 110549893 559 TTTTATTTCAGGAATACTTCCAAGGTCAAGTGAAGCCTATTGCAGATTCTCTGGGATGGAATGATGCTGGAGACCATGTCACAAAGTTA-------TTCTCACTTTTTAACAACTAAAATTCATTTAACATTTGTTTTTTGTTTTAAGACTTGT-TGAAAAGTGCTTAA------GGCCCTGGATTTGTGTTTGTTTG-----TTTTTTAAGGTTACTCCGTTCCTCCGTGTTAGGGTTTGCGTGCAAGATGGGAGACAGAGAAGCCTTGAACAATGCTTCCTCGTTATTTGAGCAGTGGCTAAATGGGACTGTAAGGTGATTACTCACATTGTTATGCTTAGAAG------ACACATTT---GAGAAAAGAGTAGTTGAAATCTCTGAAACACTGTTTCTT---------CTTCTAGCCTTCCCGTAAATCTCAGGCTTCTGGTGTATCGGTATGGGATGCAGAACTCTGGCAATGAGATTTCATGGAACTACACTCTTGAGCAATACCAGAAAACTTCATTAGCTCAAGAAAAAGAAAAACTGCTGTATGGATTAGCATCAGTGAAGAACGTTACTCTTTTGTCAAGGTAAGTT chr4 - 94230402 34830487 34830486 34831063 59399340 59399339 59399916 577 TTCTACCTCAGGAATATTTTCGCTATCTGGTAAAACCCATTGTGAATAAACTGAGCTGGAGTGATTCTGGAAGCCATTTGGACAGGTTGAAAAATCTTTTCAGTTTTC---------------TTTAGCATATTATTGATAAAGAAGGAGTTACACAAGGAGTGCTAAGCAGAAGGGAAATAATTCTATCTCTCTTCCCCTCCTTTTTAAAGGCTTCTTCGTGCATCTGTTCTAGACTTCGCATGCAGTATGAATGATGTAGAATCTCTTAGCAATGCTTCTCAACAATTTGAGCAATGGCTACAAGGGCA---AACGTGAGTTCTCATGGGTCCTGGCAAAGGACTTGGTCACAGATCTCCAGCAGGAAATGTGGGAAGAATAT-TAAAATACTTTTTTTTGTTGTTGTTATTCTAGCATTGCTGTAAATCTCAGGCTCCTGGTATACCGCTATGGGATGCAGAATTCAGGCAATGAGTCATCATGGAATTACATGTTCAAGACATACCAGGAAACTTCATTAGCACAAGAAAAAGAAAAACTTCTGTATGGCCTGGCATCAGTGAATAACATCACCCTTCTGGACAGGTGATTT ..:..::.........:..:.:xx:..x:..:..:..:....:::..xxx...:.x....:....x.....::....x.x:xx.:...:-------..:...x....:---------------....:...x.xx..xx.:xxxx.:..x..::-::.::......x.:------..xxx.::x.:.:.x.:.x..:x-----.....x....:.x..:...x.x..:..x:...:x..:..:....:x...::x..::x....x.::.x.:.........::x::x.........:......x.x...xx---..x....x.x....::xxx::xx..xx..:.x------...x..:.---.x:::..:x..:.xx::...x.-.:...:...x...:..---------x.......x..x.:..............:.....:..:..x..............:..x.........x:x........:....:x:.::..xx.......:.............x.................x........x:.:...........x...:.:..:...:..xxx....:.x.. 89M7I12M15D31M1I14M6I23M5I108M3D32M6I8M3I22M1D16M9I185M 362/540 67.0% 577/94230402 0.0% 56/540 10.4% 75718848 NA +3662 chr4 + 190214555 110559638 110559637 110559751 114 TCTCTCCAGATATACACTCAATAACAGAAACCTTGGCCGAATTGTCACAATAGCAGAGCCA----TTCAACACTGAACTGCAACTGTGGCAGGTATGAAGATAA-ATTCCTCTGCATTT chr4 - 94230402 34833879 34833878 34833993 59396410 59396409 59396524 115 TTTTCCTAGATTCACTATCAATGATAGAACCCTTGGTCGCATAGTAACTATC----AGCCAAAATTTCAACACTGACCTCCAGCTTTGGCAGGTACGGTGCCAGCATTTCTCTTAGTTT .:.::.:....x:..xx.....:.:....x......:..x..x..x..x..x----.....----...........x..x..:..x.........:.:x.x:.:-...:....xx:... 52M4D5M4I39M1I14M 79/110 71.8% 115/94230402 0.0% 9/110 8.2% 75725759 NA +3006 chr4 + 190214555 110593014 110593013 110593067 54 GAACTCATCTTCTCTCATTCTTTTTATTATTCAAGAAAAAATAAAAAACAACTA chr4 - 94230402 50609575 50609574 50609628 43620775 43620774 43620828 54 GAACTTATTTTCTCTCTTTCTTTCTATTAGGAAAAATAAAACACAAAACAACCA .....:..:.......x......:.....xxx..:.x....:.x........:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 59983439 NA +3115 chr4 + 190214555 110598338 110598337 110598496 159 GTATTTCAACCTCTTCAGATTTTTTTGAATTTTACTTCTGTCATATCAACAACACTCTTGAGCTTTGAATTATTAAGCATGCTAAGTTATAAAATTTTTGAAATCCAACTTATTAATAAAAATGTTGCTAAACACTTGTGTCTCCAGGCCTACATACAC chr4 - 94230402 4477200 4477199 4477358 89753045 89753044 89753203 159 GTACTGCAATCTTCAAAAGTATTTTAACATCCCGATCATCTCATAGATGAAAATTTCATACTCCTGGGACCGTGAGACTAACTACATAATGATATTTTAAAAATCCACTTTAGTTCTAGAAATGTTGCTAGTTACATAAGTCTATATTCCTACACACAC ...:.x...:..::xx.::.x....x:x..::::x.:x.x.....xxx:x..xx:..x.:xx.:.x.:.:::.x.::.xx:...x:.x..:.x.....x:.......x:...x.xx..:...........:x:..x.:x....x:.xx......:.... 159M 90/159 56.6% 159/94230402 0.0% 0/159 0.0% 106121138 84093417 +76786 chr4 + 190214555 110617425 110617424 110618661 1237 TGTATGCAGTATATTTTACTCCCATGAAATAAAACACATT-TGTTTCATATTTGCTGAAAAGTAAAACAATAATATTGTACGAAATGTTATACACAGGGTAGGTTGTACATAGCAGTTTCAGAAACATCATTGCATCCACCAGAGAAACTATTCTAAAACTGATATTCACACA--TTTTTTATAATAATAATAATATGTTAGAAACATACAGTGTGGCATTTAGTATATACACTCCCTTGCTCGCAAGCGAAAAA-TCCTAATCGCTTCTGTATAACATGCTTTATTTTAAAGCCTAACCTTT-AAAAACACTGTTGTGATATTACTAACAACTGCTTTTATAAAATTAATTTGACATTTCGATATATATACATCCTTTCAGTCATTTAA-ATGTTAACAATGCTAAACTTAAAAAATAACAAGCTTATAGTAATGTTAAAATGTCATATC-----CAGTCAAACATTTGTTTGTGTATGT----------------GTCCTTGCAACTGTTAGAAATACTTGTAGTGAAAGATGTCAGACACTGAGGACATCCCTTTGAAATCAAAGGAGCTCTCTCTTTGATTCAGTGGTTTCCTTTTCTCTATATAGCTTCTCTTTCTC-TCCCTTTCTTTAGTGCCCACGACCTTCTAGCATAATTCCCAGT-CTTTCAAGGGCGGAGTTGCCCCATCCGGCAAGGTCCTAGGATCCCGGCGCTGTGGGTGCGGCTCACACGGGCCGGTCCACTGCATACTGGCAAGCACTCAGGTTGGAGGCCGGGTTCTGCACGCTGGCGTAGCCGAAGCTGGAGTGCTGCTTTGCTTTCAGTCTCAGGCTGGCCAGGCTCGAGTTACACGTGTCCCTATAAACATACGGAGGAGTCGGCGGCGCGTAAGGACAGGCAGGCGTCGGCACCGCGGAATTCAGCGACGGGCTACTCAGGTTGTTCAAGTTATTCAGGCTGTTGAGACTGGAGCCCGGGACGCCTGTCACTGCTGAGGGCACCATGCTGGACGACATGCTCATGGACGAGATAGAGTTGGGTGGGGAAAACATGCTCTGTGATGACAGGGGGTTGACGTTCATAGAGTTGAAGAAGGGGAAGCTCTTGGTGGATAGGGAGGCGGATGTAAGGCCCTTGGCGGCCCAGTTGTTGTAGGAATAGCCTGGGTACATGTCGTCGTAGGGCTGCATGAGCCCATTGAACTGCGGCCCGAAGCCATTCTTGCATAGCTCGGC-CTGCTGGTTGCGCTCCCTCTTTCTCCA chr4 - 94230402 34861836 34861835 34863078 59367325 59367324 59368567 1243 TGAATGCTGCATCTTTTACTCCCATGAAATAAAACACATTATTTTTCGTGTCGGCTGAAAAGTAAAACGAGAATATTGTACGAAATGTTATACACAGGGCATGTTTTACATTGCAATATCAGAAACATCTTTGCATCCACCAGAGGTACTATTCTAAAACCGATATTCACACAATGTTTTGTTTTTAATAATTATATGTTAGAAACATACAGTGTCGCATTTAGTATATACATTCCCTTGCTCGCAAGCGAAAAACTCCTAATCGCTTCTGTGTAACATGCTTTATTTTAAAGCCTACCCTTTTAAAAACACTGTTGTGATATTACTAACAACTGCTTTTATAAAATTAATTTGACATTTCGATATATATACATCCTTTCCGTCATTTTTTATGTTAACAACGCTAAACTTAAAAAATAACAAGCTTATAGGAACATTAAAATGTCATATCATATCCAGTCAACCATTTGTCCGtatatatatatatatatatatatGTCCTCGTAACTGCT-GAAATACTCTTAGCGAA-GATCTCCCGATCTGTAGGAGGTCCTTTGAAAACAAAGGAACTATCTCGTT---TCAGTGGTTtcctttactccct-tctctcctctttcccctctctctccgtcttcccccctctcctcctccACGGTGCCCACCGCTCTCCAGCGCAGCTCAGTCCGTGGCAGCGGGGT------------------TGGGTTGTGCTCACACGGGCCTGTCCACGGCGTACTGGCAGGCGCTCAGGTTGGACGCGGGGTTCTGCACGCTGGCGTAGCCAAAGCTGGAGTGCTGCTTGGCTTTGAGTCTCAGGCTGGCCAAGCTCGAGTTACACGTGTCCCTATAAACGTATGGAGGCGTCGGAGGGGCGTACGGACAGGCCGGCGTGGGCACCGCCGAGTTGAGGGAGGGGTTGCTCAGGTTGTTCAAGTTGTTCAGGCTGTTGAGGCCGGAGCCGGGCACGCCGGTGACCGCCGAGGGCACCATGCTGGAGGACATGCTCATGGAGGAGATGGAGTTGGGAGGGGAGAACATGCTCTGGGAGGACAGCGGGTTGACATTCATGGAGTTGAAGAAGGGGAAGCTCTTGGTGGAGAGGGAGGCGGAGGTGAGGCCCTTGGCTGCCCAGTTGTTGTACGAGTACCCGGGGTACATGTCGTCGTAGGGCTGCATCAGGCCATTGAACTGCGGCCCGAAGCCGTTCTTGCACAGCTCGGCAATGCTGGTTCCTCTCTCTCTTCCTCCA ..x....x.:..x...........................-.x....:.:.:x...............:.x............................:.x...x.....x...:.x...........x...............:x.............:............--x....xx.xx.......x......................x................:......................-................:........................x.....-............................................................................x.......xx-..........:.............................x..::...............-----.......x.......::..:...:.----------------.....:.:.....:.-........:x...:...-...x..xx:xx...x:.:x:x:.........x.......:..x....x..---...............x...:x.-.xx..:.......:.-..:..:..:x.xx.x...x.xx:.:..:xx..:::.x....x:-..:..x..x..:.xx:x.:..xxxx.:..::...------------------.....xxx.............x......x..:........:..:...........x..x.......................:.................x.....x................:...........................:..:.....x.....x..x.....x........x.....x........x..:..x..x..x...:.:.................:..............:.:......x..x.....x..x..:..:.................x..............x.....:........x.....:...........x..x.....x........:.....:.............................x...........x..:...........x..............x..:..x..x..........................x..x.......................:........:........-x........x.x...:.....:..... 40M1I132M2I80M1I47M1I86M1I60M5I25M16I15M1D17M1D50M3D22M1D15M1I43M1I34M18D520M1I27M 1038/1213 85.6% 1243/94230402 0.0% 54/1213 4.5% 75755589 NA +15601 chr4 + 190214555 110621126 110621125 110621372 247 CTCCCCCCATCCCTCCCAGACTCCGTGCTGGCTCCTACCCGGACTCGGGCTTCCGTAAGGTTGGTCCACACAGCGATTTCTTCGCGTGTGGACATGTCCGGGTAGCGGTTCCT-CTGGAAAGTGGCCTCCAGCTCCTGGAGCTGCTGGCTGGTAAAGTGAGTCCGCTGCCGCCTTTGCCGCTTCTTCTTAGACGGGTCCTCGGCGCCCACGTCCTCATTCTTCCCCTGCTGGCTTTTATCTTTCTCTG chr4 - 94230402 34864229 34864228 34864463 59365940 59365939 59366174 235 CTCCCCGCTCCGCCCCCGGACTC-------------ACCCGAACCCGGGCCTCGGTGAGGTTGGTCCAGACGGCGATCTCCTCGCGGGTGGACATGTCGGGGTAGCGGTTCCCGCTGGAAGGTGGCCTCCAGCTCCTGCAGCTGCTGGCTGGTGAAGTGCGTCCGCTGCCGCCGCTGCCGCTTCTTCTTGGAGGGGTCCTCGGGCCCCGCATCCTCGCTCTTGCCCTGCTGGCTCTTCTCTTTCTCTG ......x.x:.x.:...:.....-------------.....:..:.....:..x..:...........x..:.....:..:.....x...........x.............:-......:.................x..............:.....x.............x:..............:..x..........xx...:.:.....::....x...........:..x.......... 23M13D77M1I134M 199/234 85.0% 235/94230402 0.0% 14/234 6.0% 75756897 NA +19095 chr4 + 190214555 110625121 110625120 110625390 270 ACAGCGTTTCACTGAAGACAATGCTCTTACATTTGTAGTGGTTTTTAATCTGATAAGACTCTAATTTGCTTAAGTCTTTTAAATAAGGGTTTTAAA-TGTTTCTAGCCGTTTTCTTATTGAATTTCCTCTAATTCCCCCAAGATCATAAAGTATATGTGTAAAGTAAATATTTCCTCCCATTGCACTGCCAGCCGATGACCTATAACTAAGTCAATAAGAATCCAGCTCTTTTCTGCTGAATGTGTTTACTAATCATATTCCAGTTTCTTC chr4 - 94230402 34866012 34866011 34866282 59364121 59364120 59364391 271 ACAGCGTTTCGGCGGAGACGACGCTCTTACATTTGTAGTGGATTTTAATCTGATAAGACTCTAATTTGCTTAAGTCTCTTAAATAGGGGGTTTAAAATGATTCTAGCCGTTTTCTTATTGAATTTCCTCTAATTCCCCCAAGATCATAAAGTATATGTGTAAAGTAAATATTTCCTCCCTCCGCACCGGCAGCCGATGACCTATAACTGAGTCAATACGAAGCCGGCTCCGCTCCGCACAATTTGTTTACCGACCCTCTCCCCGCTCCCTC ..........:x:.:....:.:...................x...................................:.......:...x......-..x...............................................................................x::....:.x...................:........x...x..:....:x:..:..xx...x.......::.:.x.x.:..x.:.:.:.. 96M1I174M 233/270 86.3% 271/94230402 0.0% 1/270 0.4% 75759109 NA +12714 chr4 + 190214555 110627778 110627777 110628022 245 TTTGCTCTCCCTTCTTTCTGTTTTCTCTCTCCCAGACATGCTGGTAGCTAACATTCAGCATTAGTTGTCATGGTGACCATAAATCACCTAAATCCAAAAATACCCACCTATAATCTGAGATGAAGCTTTTATTTCCCTAGCGAAATAATATTTTAAAAGCTGTCAGCTGACAAAAAAAAAGGAACCCACCTCATTGTAGTAACCCAAGTAATATATTACTTCTAAAGGTTTAAATTAAAATGTCA chr4 - 94230402 34866382 34866381 34866619 59363784 59363783 59364021 238 TTGGCTCTTCCCCCCGCCTACAGCCCCGCAGCCGGCCGGGAGGGGAGCGGGCAGGCGGCGTTAGTCGTCATGGCGACCATAAATCACCTAAATCCAAAAATACCCACCTAGAAGCTGAGATGAAGCTTTTATTTCCCAAGCGAAATAATATTTTAGAAGCTGTCAGCCAACCGAAAAACAAG-------CTCGTTGCAGGCACCCGAGCCATAGATTAGCGCTAAAGGTTCCAATTAAAATGTCA ..x.....:..::.:x:..::xx:.:.x.xx..:.x.:x.xx..x...x::..xx.:..:.....:.......:....................................x..x.......................x.................:...........::..x:.....x.:.-------...:...:..xx....:..:x...x....x:x.........:x............. 182M7D56M 183/238 76.9% 238/94230402 0.0% 7/238 2.9% 75761396 NA +5596 chr4 + 190214555 110632825 110632824 110633016 192 CTGCCCAGGCTGGCCCCTCGGGGAAGCGCCCCTCGCTGGGGCCTCGCCGCAGGGCCA--------GTGCCCTCTTGCCGCCCTCACGTGGCGCGGCCTCCCGTCCGATGACCCGGGCAGGAGAAGGGGGTTCTTACCTAATTGCACACACGCCGACACCAGTTTGCGGCAGTTGGTCTCCATTCCCCGTTATCTGCAAAA chr4 - 94230402 34869502 34869501 34869698 59360705 59360704 59360901 197 ccgcgcaggcgggcggccgggcgcggagcggagcggcggggcc-cgCGGTGGAGCTGTgggcggcgggtccccgcgtccccccggcgcctcccggctcccccagcggaggccgcgg--ggcggTGGGTTCTCTTACCTAGCTGCACGCAGGCTGAGACAAGTTTACGGCAGTTGGACTCCATTACCCGTTATCTGCAAAA .:..x.....x...xx.:x..x.x:.x..xxxx..x:......-...x.::.:..::--------.x.:..:.x:.:.x...:x:..:xx.x....::...xxx..:x.:..xx..--..x.:x...xx:.........::.....:..x..:..x..x.....:..........x.......x................ 43M1D13M8I51M2D82M 126/189 66.7% 197/94230402 0.0% 11/189 5.8% 75763323 NA +15263 chr4 + 190214555 110634375 110634374 110634582 208 CTCCAGATTTAGTGATTCTGCAGTAAAATCACAGGATTAGTCCCTGATTGAGATGTCTGTTCGTGAGATATTACAAAATTCATTATCACAGCTTTCTACTAACTCGATATGAAGTAACACAGATGGGATTTTATTAGTCCAGACTTCAAATGTTTACTTATGATAATTTCGGAGGAAATTTGCATGTCATCATCATTTCGATAATCTT chr4 - 94230402 34869978 34869977 34870185 59360218 59360217 59360425 208 CCCCAGCCCGAGTGGCTGGGCGGTAAAATCATGGGATTAGTGCCTGATTGAGATGTCTGTTCGGGAGATATTACAAAATTCATTATCACAGCTCTCTACTAACTCGATATGAAGTAACACAGATGGGATTTTATTAGTCCAGGCTTCCAGTGTTTACTTATGATAATTTCGGGGGCAATTTGCATGTCACCGCCGTTTCGGTGCGCTT .:....x::x....::.xx..:.........::........x.....................x.............................:................................................:....x.:......................:..x.............:.::.:.....:.:xx... 208M 180/208 86.5% 208/94230402 0.0% 0/208 0.0% 75764397 NA +20026 chr4 + 190214555 110639636 110639635 110639958 323 CCTCGCCTTGCCCAGCG-----CCAGTGCAGCTGAAGTGAGCAGCTGGTGGGAAATGCAAATGGCTCCTGGAGAAATAGAAGATACAGAATGATTCTCATTCCCTCCTCGAGTGTGTGGAAGGAGCTGGACATACGTTTCACGCTCCTAATCCTTCTTTTACATTTTTAGTCATACTCCTATTAAACAACTAATTAATGCCCAGAATCACCAGGGAATACATTAGGCATGCAATCGTAGAAGCAGGGTGCTGGGG-GGCTACAAACCACCGAGCTGATTTAAGACGTGGATTTCAGGTTTTTCCCT-------TGTCAAAGC-AGTAAAGGAAGAGC chr4 - 94230402 34873974 34873973 34874309 59356094 59356093 59356429 336 CCCCGCTCTAACCCGCGTTACCCCTCTGCAGCCCAAGTGAGCAGCTGGTGGGAAATGCAAATGGCTCCTGGAGGAACAGAGGAGAGCGGGTGATTTTCATTCCCTCCTCGAGTGTGTGGAAGGAGCTGGACATACGTTTCACGCTCCTAATCCTTCTTTTACATTTTTAGTCATACTCCTATTAAACAACTAATTAATGCCCGGAGTCACCGGGGAATACATTAGACATGCTGCTGTGGAAGAGGGGTTCCAGGGCGGCTGGAAACCGCGGAGCCGCCTGAATGCCCGGATTCC-GATTTTTCTCTCCCCTTCTGTCAAAGCGAGAAACGGGAGAAC ..:...::.:x..x...-----..xx......:x.......................................:..:...:..x.xx.::.....:..........................................................................................................:..:.....:.............:.....x:::..:....x:....x.::...-....:x.....:.x....:.x:.x..x:.x:.....:.-.:......:..-------.........-..x..x..:...:. 17M5I233M1I38M1D11M7I9M1I14M 270/322 83.9% 336/94230402 0.0% 15/322 4.7% 75765662 NA +18481 chr4 + 190214555 110640761 110640760 110641847 1087 GCTCCTTATCTGACAACAAGCGAGTATGTAAATACCAATGGCTAGCGATGTTTAACTGCCTCAAACATTATTGATTTGTTGG-CTGTTCTAA-ATTGTCTTCCTAGTCCAGGTCTTGTTTCCGAATTGTCTATTCTAGAGGTTTGATCCATGCCTCCGATGCTACAATACAATAATTGTTTTTTTAAAAAAGGCATTTAAGATGAACCAATTGATTTGCATATAAATTAAAATTACTATGCGTTGCCGATTCCGGT-GTTTTATAATCATTTCGAAATTAGTACTTAACCACTTGAGCTAAAAGAATATATAAATGCCTGTATTGACTCACTAATGAATTACCCAATTAAAACGTCCGGGCAATGCTGGGCGCTGGAAAGATTGTTAAATCAAGACATATTACAGGAGGGATATGAAGATTAGAAAGGTAACAGACCAATATCTCGCACTCAAAACGGAGTTTCCGGTGATTCCCAGCTTTAATTTT--------GGAGCAGGGGTCTTTCTCCTCTGCTGTTAAAAAG------ATTTTGTGCTTGTTTGTGAGTGAGTGCATTCAAGTGGAAGGAACGCTCCCACGGCTACGGTGGCTCAGGCCCTTTGCTCGGACCGGGACCTTACAGTTCTAACCCAGGAGCGTTAAACTCTGGAAGACTCCGGGCCAGCCCTGGAGGTGCG-TGGCCCCGCAAGTCGCCAGGCCAAGCTTGCTTTTTCTGTCTGCCCCTCCGGCAGGCTGGGCGCGCTATGGCAGTGAGCTTTCCGCGC-----------AAACGGAGAGCTGGAACCAAAGCTGACATTTAATAGAT----ATGCTAACTGAGCACTTACCTTCGTCCTGAGAATAGGAATAAAAGGTAGCTCTTCTTA-------------------AGAGAGGCGGTGCAAAGGCACGCTATAGGAGTTCAGAAAAGGCTGGCGGCG-------------GGAAATCTG-TAGCCT-GGGGGCTAGTCAACATCCCCTTTCATTTCA---AGCACT-TATTGATTTGCTGTTGTCATCTTTGGCGACGCAGAAGGACACTTGAAAGAATTTCTGATGGGGCTCTGATCTGAGAAAGGAGGTGACCTGCCCAGGCTCCCACCAAATTCTTAATTACCACATCAACTGCTTT chr4 - 94230402 34874604 34874603 34875636 59354767 59354766 59355799 1033 GCTCCTTATCTGGCAGCGGACGCGTCTG-AGGTACCCGGGGCC-GCTCTGTT-AACACGCTCAGACGCTATCGATCTGTTGGGCTGCTCGAATATTTTCTTCCC-GTCCAGAGCTGGTTTCAAAATTGCTCGTTC-GGACGGCTGATCC-------CGGCGCTACAACGCAATGATTGTCCCA--AAATTAAGCGTTTCGAACGGACGCGGCGATTTGCATATAAATTACAGGGACCCCGTCTCGCGTTTTCCGGCCGTTTTATCGTCGGTTCGAAATGAGCGCTTAAACACTCGAGCTAAAAGAATACGGAA---------------------TGAATTGCCCAATTAAGGCGCCCCGTGGAGCCCGCTCGTTAG-------GGTACATCGGGGCACGC--CGGGGTGAGGACGGCGGTGCGAATGG-GGCGCAGCGATCTC-CGTTAGCACAAAGTAACCTCAAGC----CCCGTATTTGTTTTTCTTTCCTTTGATC-----CCTTACCCCTCTCCTATTAAttctttctttctttctttcttttttCTGAAGGAG--------AGGGAAGAGGAGGCACC-------------GCCCGGGCCCT---CCAGCTCTGCGATGTCGCGG---------GGCAGCGGGAAGC---------------AGCAGCCC--GTGTCGCGATAGCGCTGCGAGCCGA------GAGCTTACCTTCGTCATGAGCATAGGCATAAAGGCGGCTCCGCTGCGAGAGGCAGCGCCCAGCGCGAGAAGTTCAGAAAAAGAGAGCGG----CGATGCGAAAATCTG-TAGCCTCGGGGGCTAGCCG-GCAGCCCCTTTCATTTCAAGAA----ATTATTGATTTGCTGTTGTCATCNNNNNNNNNNTCCGCTGCGAGAGGCAGCGCCCAG---CGCGAT-GAAGTTCAGAAAAAGAGAGCGGCGATCCTACATACGAGTGGCTCCGCTAGCCTCGGGGGCTAGCCGGCAGCCCCTTTACTTTCACAGAGGGCTCTCTTGATTTGCTGTTGTCATCTTTGGCGACGCAGAAGGACACTTGAAAGAATTTCTGATGGGGCTCTGATCTGAGAAACGAGATGACCTGACCGGGCTCTCACCAAATTCTTAATTACCACATCAACTGCCTT ............:..:.:::..x..x..-.::....x:x...:-..xx....-...xxx....:..::...:...:......-...:..x..-...x......:-......:x..x.....x:.....::::...-:..x.x:......-------..::.......::....:.....:::x--...xx.:..:...x::.:.:..xx:x:.................x.:xx..:x:.:x.:..xxx......:-.......x:..:x........x..::.....x....:..............::x..---------------------......:.........::..:..x.xx:.xx.:.xx..:.:.-------.x..x...::.:..:::--.:..:x.::x.:.:x.:.xx...x..-::.:x.x.:..x..-..:xxx..x..x.x.:::..x:.:----...:xx...:x....--------x..x.-----:...x.:.....x..:....xxxx------x...:x.x...x...x...:x...--------..x.:.::.:.x..x..-------------..:.:......---.:x.xx.:.x..:x.::.:.---------:.x....xx..:.---------------:x......--.x.x:...-.:..x.:..:..:..x------:.....:.:..:x:::.xx..x:xxx.:xx.:.x:..x:x....::.:x..xx...x::.x....-----------...x:......x.----.:.x..x:.x..:.:-...x:----:x....:.:.-...x::x.:...:.::::....----.x..xx::x.x...x..x.:.-------------------x.......:.:..xx..---...x..-.:...........:.xx:......-------------.x::x..:.-......-.........:.::..x.......xx.....---..x:..-.x............................................................................x...:.......x..:.....:..............................:.. 28M1D14M1D8M1D29M1I9M1I11M1D30M1D13M7D27M2D71M1I56M21D42M7D17M2D26M1D14M1D24M4D15M8I5M5D24M6I24M8D17M13D11M3D20M9D13M15D8M2D8M1I16M6D65M11I13M4D15M1D5M4I10M1D22M4D21M19I17M3D6M1D24M13I9M1I6M1I30M3I6M1I133M 656/962 68.2% 1033/94230402 0.0% 196/962 20.4% 75766157 NA +8727 chr4 + 190214555 110641549 110641548 110641735 187 ATAGATATGCTAACTGAGCACTTACCTTCGTCCTGAGAATAGGAATAAAAGGTAGCTCTTCTTAAGAGAGGCGGTGCAAAGGCACGCTATAGGAGTTCAGAAAAGGCTGGCGGCG----GGAAATCTGTAGCCT-GGGGGCTAGTCAACATCCCCTTTCATTTCAAGCACTTATTGATTTGCTGTTGTCATC chr4 - 94230402 34875185 34875184 34875369 59355034 59355033 59355218 185 ATAGCGCTGCGAGCCGAGAGCTTACCTTCGTCATGAGCATAGGCATAAA-GGCGGCTCCGCT-GCGAGAGGCAGCGCCCAG-CGCG----AGAAGTTCAGAAAAAGAGAGCGGCGATGCGAAAATCTGTAGCCTCGGGGGCTAGCCGGCAGCCCCTTTCATTTCAAGAAATTATTGATTTGCTGTTGTCATC ....xxx...x.:.:...x:............x....x.....x.....-..::....:x..-:x.......:.:..xx..-.:..----..:...........:.xx:......----.:.............-.........:.::..x................x.x...................... 49M1D12M1D18M1D4M4D25M4I15M1I57M 146/180 81.1% 185/94230402 0.0% 12/180 6.7% 75766364 NA +17700 chr4 + 190214555 110682302 110682301 110683238 937 AGACCTAGGTTTGTTTCTTAGACTATGCTATTAATTTTGTGTCATCACAGAAAGTAGCCCAGTCTTATTTTGAGATTGGTTTATTTTCCCTGGACAT-TTGGGATGAATAGCTCAGCATAACAGATTATT-CTATATACTTTAGTTTCAAGCATTT--AAAGTGGAGTCCAAGTTTTAGCATCAGGAACCAATTAAATGATAGTTAAATCTGACTGAAAAATTAATGGTCCAGAACAGAAACTGTGTAGCTTTTTTT-----------TTTTCAGCACTTCTGTTTTAAATAAAAATCTGGATGCTTCCCAGTAAAACACAAAGCGTCATTAAAAAAAAAGCAGTTGAAT-ATAAATAAAACCACACCCAGTCTTAAAAATCATTTAATGATGATTGTATTCTTAGT-CTGCTATTAAACACA-AGGTGTTTATCA--GCCTTCATGGGCTGCTAAGAGTTTGGCTACAAAACACATAGCACTGTGGGGCAATGTAGGATTGCAGTGCTACTG-----TGCCTCTTTAGGGTGAGTATGGTTTGCTCTTCAATGTGA---TTATTCTATAGTCAAATCATCTAGCATGATTGTGATAGCATCTGATTTGTGCCATAGGCGTCAATCAGATTTATGCTAATATTTTGTACTAATGATCAATATAACAGCAGAGAAAAGTGTTGATGTTCAGCCCACTGACTTAAACCTTACTAACGGGCCTTGACAGAACATAGTGGCCTTAGATTTTATGTGAGTAGAAGAGTTCAGGCTTGAACAT---------TTGGCTGCCGCTTC-AAGCACCCTACACAGAAAGTCAGTATAGTACCTTTAATCTGGCTCTAATTCAAACCTATCAGTAATCACTGAGCCTGCTGTACTTATTCTGTCAGTCTTTTTGCCAAAAAGATTTCATG--GGTAGCAATATCAGAAGCATTTT----TGTAATTA-AATTAT--------TGTCGCTTTACTGGAAAA chr4 - 94230402 34885992 34885991 34886916 59343487 59343486 59344411 925 AGACAGAGGTTTGTTTCC----CTTCATTATTAGTTTTGTGTCATCGTAGAAAGTAGGCTAACATTATTGTC------TTTTTTTTTTTCTTGACATATTGGGATGAATTGCTCAACATAACAAATTATTGTTATGTGCTTTAGTTTCCAGTTTTTTTAATGTAGAATCCAAGTCCCTGCATCAGGATTCAATTAAAAGATAGTTTGATTTGACTGAAAAATTAATGGTCCGGAACAGAAACCCCGGAGTATTTTTTTGAAGTTATTATTTTCAGTACTTCTGTTTTAAATAAAAATCTGGACTTAGCCCAGT--AACATAAAGTGACAT-------------GTTCTCTCATCAACTAAA-CATACATAATGATTAA----ATTTAACAGTGATTGTTTGCTTATTGCTCTTTCTGGCTACATAGGTACTTTTTATTGCATTCACAAAACGATTC---CCTGGCTATAAGTGGCACTGCACTGAGTTGCTGTGAAAAGTT-TGTTGCTACTGTCTGTTGCCCTTCTCAGGAAATAATGATTTGC---CAAGTGCAAATCATATTCTATAATTATGTCATCTTCAATGACAGCTTGAACACTCAACTTCTGTT-TACGCTTGAATCAGACATAT--TGATTTTTCATTTTAATGATAAACAGATTGGCATGTAAAACATTTGATGATACATCTGCTG----AAAACGTGCTAA-GATCTCTGAAAGGAAAAAGCAA--TTGCAATGTGGACTACTGGAGGCGTTGAGG-GTGTACATAAGATGAGGATGCATGCTACTCAGGGGTAATTCACACCAAAAG--GGTGCGAGTCCTTTAATATGGTATCACTGTGAGCATATTTAT--------AGTTTGCT-------TTCAGGCTGTCATTTGGCCAAGAAGAGTTCTTGCAGCCAAGAATACTGGGAGAATGTTAAAACataataataattataataataatGTGGCTTTCCTTGAAAA ....xx...........:----..x:::.....:............::.........x.:.::x.....x.x------x...x....::..x.....-...........x.....:.......:......-:...:.:..........x..:x...--..x..:..:.......:::x.........x:........x.......x:..:.....................:..........:x:.x..:x......-----------.......:..........................:x:xx......--....:....:.x...-------------...xxx.-..x..:x...-..:..x:.:.xx.x..----......:::.......x.x....x.-..x:.x:.::x:...-....::..x.:.--..x....::::x:.x.xx---::......:..:xx:..:x......x.xx..x:..x.:::..-::x........-----....::.:.x:..x:.xx...:.....---:x.:..::.---x.........:.:.x:......xxx....:x.:xxx.:..::::.:..x..::-..x..x.x.......:x...--.:..x...::.x:.......x..:.x.x::...x:x....xxx......x.xx::.::...----...x.x.:....-.:x.::...x..:.x.x..:::--..:x.x.x.:x::x.x.:..:.x...x...-x..x....---------x..xx...::..:x-::.:.x:::....x:....--:..::::xx........x...:x::.x.x::.:.x...:x:.--------..::....-------...x.x.x...x...x.....:....x...x..--.x:.:x....:::.:..x..x..----::....x.-......--------...x.....x..x..... 18M4D50M6D19M1I32M1I25M2I99M11I45M2D15M13D7M1I10M1D16M4D25M1I15M1I12M2I18M3D42M1D11M5I27M3D9M3I53M1D20M2D61M4D12M1D22M2D30M1D8M9I14M1I19M2D42M8D8M7D33M2I23M4I8M1I6M8I18M 589/872 67.5% 925/94230402 0.0% 118/872 13.5% 75796310 NA +19198 chr4 + 190214555 110686754 110686753 110687082 329 CTGAAATTGGGTATTCCGAGTTTCATCCTGAAGCAAATTTCTATAGCTGAGTTATAAGTCCCTGAAAAATGAGGTTT-ATGATGAAAATGTTGAAAGACCCTCAACTTTAGGACAAGGCACAACTATAATTTTACAGGCATTAGGCACCTAAAATAACTTTGTATGAAGATTACTCTGGGATTTGTCCCCCATTGTGTAGAAAATGCTTAATGTTGAACTATATTTTATGCACACAAAAAGAC-TTACTTCATAAGACAAGGAGCACAGGGATTTTCATTCCAATATTCAACAATACTATTACTAAAGGGCTCTCTCCTTCTACTCTCATA chr4 - 94230402 34891457 34891456 34891782 59338621 59338620 59338946 326 CTGAGGGTTTATACACCAAGATTCATCCAGAATCAAATTGTTACGGTCAAATTGTAAGCCCCTGGAAAAAATGGTTTTATAGGGGGAATGTCAAAAGACCCTCAAGTTTAGGACCAGGCACAGATATAATTTTACAGGCATTAAGCATCTGAAATAACTTTGTCTGAAGATTACACTGGGATTTGTCCCCCATTTTCTAGAAAATACTTAACATTGAACTGCATTTTATGCACACAAAAAGACTTTATTTCATAAGATAAGGAGATCAGAGATTTACATTCCAATATTCAACACTGCTATTGCTAAAGTGTTCTTTC-----ACTCGCATA ....::x.xx:..:x..:..x.......x...x......x:..::.:::.:..:....:.....:....x:x.....-..::x.::.....::............x........x.......:x...................:...:..:............x..........x...................x.x........:.....::.......::.....................-...:.........:......xx...:.....x.................x.:.....:......x.:...:..-----....x.... 77M1I165M1I73M5D9M 262/324 80.9% 326/94230402 0.0% 7/324 2.2% 75795297 NA +3659 chr4 + 190214555 110686755 110686754 110686863 109 TGAAATTGGGTATTCCGAGTTTCATCCTGAAGCAAATTTCTATAGCTGAGTTATAAGTCCCTGAAAAATGA------GGTTTATGATGAAAATGTTGAAAGACCCTCAACTTTAG chr4 - 94230402 18850180 18850179 18850294 75380109 75380108 75380223 115 TGAGATTTGATACGTTAAATTTCAGCTTGTAGTAAATTTTTACAGTTGAGTTATAAACCTCTGGGAAACAGTGGGTTGGGTTATCACAGAAATGCTAATACGAACATAACTCCAG ...:...x.:..:x:::.:.....x.:..x..:......:..:..:..........::.:...::...:::------..x....x.:::.....:.:.x.x:xx.x:....::.. 71M6I38M 69/109 63.3% 115/94230402 0.0% 6/109 5.5% 91836575 NA +3460 chr4 + 190214555 110686765 110686764 110686861 97 TATTCCGAGTTTCATCCTGAAGCAA-----ATTTCTATAGCTGAGTTATAAGTCCCTGAAAAATGAGGTTTATGATGAAAATGTTGAAAGACCCTCAACTTT chr4 - 94230402 71980456 71980455 71980555 22249848 22249847 22249947 100 TATTCTGAAATACA--CTGGAGCATGAAGTATTTATAGAGATGAGTTACACATTCTTAAAAACTGAATTTTATAATGGAAGTGTTGACACACACTTAATTCT .....:..:x.x..--...:....x-----....x..x..x.......:.x:.:.:.:....x...:x.....:...:..:......x.x..x..:..:.:. 14M2D9M5I72M 68/95 71.6% 100/94230402 0.0% 7/95 7.4% 38706309 NA +3010 chr4 + 190214555 110695398 110695397 110695452 55 TCTTTTTCTGTTTCTTTTCTGCTTCTATTTGTTCTGTTTCTTTTTTTCTCTTTTC chr4 - 94230402 69007412 69007411 69007466 25222937 25222936 25222991 55 TCTTTTTTTCATCCTTTCCTAAGTCTTTTTGGTGTGTTTCTTCTTTTCTCTTTTC .......:.xx.:....:..:xx...x....x.x........:............ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 41687986 NA +3205 chr4 + 190214555 110703027 110703026 110703072 46 AAAAAAAAAAAAAAAAAGATTTGTTTTTATTTTATTATTAAAAAAA chr4 - 94230402 80333404 80333403 80333449 13896954 13896953 13896999 46 AAAAAAAAAAAAAAAAAGGTTTGTTTTTCTTTTAATAACAAAAAGA ..................:.........x.....x..x:.....:. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 30369623 NA +3025 chr4 + 190214555 110729643 110729642 110729706 64 ATACACACACACATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATCA chr4 - 94230402 19704280 19704279 19704343 74526060 74526059 74526123 64 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCA .....:.:.:..:.......x.:.:...:.x:..:............x:.x.xx....x.x... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 91025363 NA +3053 chr4 + 190214555 110729656 110729655 110729704 49 TATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 19704277 19704276 19704325 74526078 74526077 74526126 49 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ..x...:.......::.......x.....:...x::...........:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 91025379 NA +3116 chr4 + 190214555 110729657 110729656 110729702 46 ATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704280 19704279 19704325 74526078 74526077 74526123 46 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGT ...:.......::.......x.....:...x::............. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 91025377 NA +3782 chr4 + 190214555 110736059 110736058 110736139 81 TACCTATAAAGCA--GGGGCGTACAATCTTTTGTCTTCCCTGGGCAGCATTGGAAGAAGAAAAATTGTCTTGGGCCACACATA chr4 - 94230402 50314684 50314683 50314766 43915637 43915636 43915719 83 TAATTGTAAAGCACATGGGCATCCAAACTTTTGTCTTATCTGGGACACATTTAGTGAAAAGAAATTATCTTGGACCACATATA ..x:.:.......--x....:.x...x..........x:.....xx:....x::x...:.:.....:......:.....:... 13M2I68M 60/81 74.1% 83/94230402 0.0% 2/81 2.5% 60421375 NA +56152 chr4 + 190214555 110748378 110748377 110749981 1604 TAGAAGGGTAAACA--GTAAACACCAGTTATTTTA----AGCACA-ATCTAATCAGAGTTCAATGAGAAGCAATA-----------------------TTATATT-----------TGATCTCTAAGGTATTAATA------CTTGTATATCACTATTAGACATCTTTATGTAGTCCATTATCCAAACAATGGCTTAAGTCTGTGGTATTTAATAAATCAAGTTTCCATGGCCGTGAGACTGAGTGGGAGTGGGG-ATGAAGCCTTTTTTCTTCATTTTTTTTTCCTCAGGTGCAATTCTGTGTTAATATAAGAGAAGTGTGGCCTTCCTTCTCATAGCACTAAAAGTGAGATAATCCCTGTGTAAGAAATCAGTAAGTACGGTCTGCTTAATCTAGTCCCAGTGTGAAACTGTTGACATTTGTTCTTTTTT--CTATCATTATGTGACTGGGCCTGTTTTGTGCTGGATTAGGCACAAATCTCCTATGCAGCACATTTGGCATGTTACTAGTAGTTTAACTTCATTAATAATGTATGAAGAAAATGTAATCCATGACAAGGAAGCAAAGAAAAGTATTTTTTTTTTTTTTTGCTTCTCCCAAATCCTTTGGAATGAGTAATTATTCAACATTTTATGTTTGATGTTATATTTTACAATTCAACTTCCATAGTGATATTTAAAAAAGAAACTTTGGCAAATGCTTGCAA-----------------------AAAACACACCTTTTACAATTTTAAATGTGATTTACTGATGGCCAGAACTTGTTAAACATAGTAGGAAAT--------TAAATATTTATTCATCTTATTTCATTTTCAGGGCCGTAAACGCTCCTTCTGAGTCATTCCCAATAACAAGAATTTCTACCAGTAAAGCTATTAACAGGCATCA-AAATAGGGGAGTGCTAAATTAAGATGAGATTGTAAAAGCAAATAAGAACATACGCAGACTCGCATAGGAGTGCAAATGATCGTTTCTGA--TTGAAATGTTTATAGCTAAATGA---GTTTGGCTGAATTAAACACAAATGTTCCAAAAGATAAGCCGTAGCTGGTGCTTCTTT--TTTCTGTTT-----------------TTTAAGCTGCTTTACAGACGAAAATGGAACTATATTTGGAACAATGCTTTCTGTTTTTCCATACTATTGATATTTGTGG-------AAAGTCACAAAATGGCCTAAGGAAGCTAAGCTCGCCCC-AAGCAGTGGTCACTTACAAGTACTTTTGTACTCTGTACTCCTGTCACATTTGGGCGATCAGAGCAACAGCTGGGGAGACTTTTTCAACAAAGATGAGTGTCAGATAATCCTGATGAGATTCCACATCCAACATCTTTTGTAATTATGTCACATTCAGCTGTAATGGAATAATTCAAGCTGAAAGAACAAGCTTTGATCCTTTCTTAAACCTTTCCCTGTGGACTGGCTATCTAAAAGATTTAAAGATATTTCTGTTACAAGATCTAGTGTTTCCTCAGAGAAGTCATGCTTCTGAAGCATCGTGATCTACAAGAACAATATCAAGTTTGCCAAACACATTTCTGAAAGCATCGTGTTTTGGGGGGAGGGGTTGTATTTAATGAAGATATCAATAATATGCTATGCTTCAATTTTCATCTAGGTGATCAAGATTCATTTTCTTGTTCTGTCATCCAAATAGGCAGACAGAAAAGTGATT chr4 - 94230402 34903881 34903880 34905465 59324938 59324937 59326522 1585 TAGTAGGGTAAACCTTGCAGACACCAGTTAGTTTAGTTTAACTCGGATTCAATTGGAGTCTGATTATAAGTAATAACCCCTTAAGGGCTATCCACAAATTTCATTGTAAGTTGGACTGGGATCTAAAACAGTAAGAGCGTTTTTGGTATGTTACTATTGG-TGTCCTTTTGTTGTCTGTCACCTCGAGGAGAGTTTGA--CTGCTATGTTTAATAAAC--AGCAGCC-TGTGTGTGTGTCTGTCTGGAAGCAGATTCTGGGACCTTTTTT------------------AGGTGCAGTTTTGTGTTAATAACATAGAAGTGTGGCCTGTCTTCTCATAGCACTAAAAGTGAGGTAATCCCTGTGTAAGAAATCAGTAAGTATGGTCTGCTTAATCTAGTCCCAGTGTGAAACTGTTGACATTTGTTCTTTTTTTTCTATCATTATGTGACTAGGCCTGTTTTGTGCTGGATTAGGCACAAATCTCCTATGCAGCACATTTGGCATGTTACTAGTAGTTTAACTTCATTAATAATGTATGAAGGAAATGTAATCCATGACAAGGAAGGAAAGAAAAGTATTTTT----------ACAGCTACCAAATCCTCTGGAATGGGTAATTATTCAAGATTTGATGTTTGATGTTATAGTTTACAATTGAGCTCCCTTCAC-AGAATTAGGGGGGAAAAT---GCACACGCACTCAATATAGTGACACTATAAGGAGGAAAAACCCTGTTCTTTGCTATTTATGCTTGTATGTACTGATTA--AGAAAGCACCAAGTGTAAAGAGAAATGTAGATTGTAAAGAGAAATTTAGATT------TTTTTAAAGA-GGAAGTGCTTTATCT---TTAATGTCATAAGCAGCAATTTATTCATGTCTTAATGAAAACAAACATGGCAAATATAGGATTTTCACTTTTCTTTGTGG------------GTAAAAATATAGGCA-------------------CTGAATTTTGTTGACTTTCAGATACTAAAGGGTGAATTATGTGTATGCATCAGCTAACTAACAAAGCT---AGAAGTTTACTCTGGTTGCCATATATTTAGTTTTTATTCAGTAATGGAGTAACACACTTGGACTGACTTGCAGGCAAGAA-------------GGAACA------------CCTAAACAGCCTTAGTATTTGTGGCGGCTGAAAAGTTGCAGCGTGGCCCAGAGAACCTGAACCAGCTCCGAAGCAGCGGTCACTCGCGGCTACTTT-GAGCTCTGTACTCCTGTCGCATTTGTGCTATCAGAGCAACAGCTGGGGGGACTTTTTCAACAAAGATGAGTGTCAGATAATCCTGATGAGATTCCACATCCAACATCTTTTGTAATTATGTCACATTCAGCTGTAATGGAATAATTCAAGCTGAAAGGACAAGCTTTGATCCTTTCTTAAACCTTTCCCTGTGGACTGGCTATCTAAAAGATTTAAAGATATTTCTGTTACTAGATCTAGTGTTTCCTCAGAGAAGTAATATTTCTGAAATAGCGAGATCTGTAAAAGCAATA--ATATTTACCAA--ACGTTTCTCAAAGCATA-------------------TTTATTAAATAAAGATGTCAATAAGAGGATGCTGTTTGATAATCAGTGAGCAAGTTGGAATTCATTTTAACATTCTTTAACTCAAATGAGTGTATAGAAAATGGACT ...x.........x--.:.:..........x....----.:.x.:-..::...::....:::..x.x...:....-----------------------..x:...-----------..:xx.....:::.x...x.------:.x....:.:......:.-::..:..x...x...::.:.:.:x:.x:.x:.:..:.--...:x:.:.........:--..:xx..-..xx:...x.x...xx...:..::.:x-x..:::........------------------.......:..:..........xx.x.............x:.......................:............................:...................................................--................:..........................................................................................:.......................x................----------:.xx..x.........:.......:............x....x...............x.........x.:..:..x.x::-.x.x...:::::....x.---...x.:..x:x...-----------------------...x.x:::::...:.x....xx:x.xxx..x.......x:--....xx::::..:::..:x::.....--------....x.xxx...:.xx..------....:.::.x-.x..::...::x...---.:.x.x:..xx.:..:x.....x.x.xx..xxx:x.:xx....::...x:-.....x:...x.x::.xx..xxxx..x.:------------:...:..:...x...-------------------x...x:x..x:...--..x.:..::.x.x:.x.:...x.---..x..xx.x.::...x:.xx..x.:.---.:.::.xx:.:x.:.:..x:::x.x...--...:.:..:-----------------:..:::...x:..:...:.:.:..-------------......------------::.xx.:.x:x..::.........-------.....::..:x:.....:.::...x..:.:.:x..:..-......:.......::.::x......-.x:...............:......x..x...................:............................................................................................................:.........................................................................x.........................x..::.......::.x..x.....::..:.:.....--.x:...:....--..:.....x.......x-------------------.x....x...:.....:.......x.x.x.::xx..::..xx...x:x..xx::.::::.........xx::....x.x.::.....::.::x.:......xx..:. 14M2I19M4I6M1I29M23I7M11I20M6I18M1D37M2D18M2D7M1D27M1I14M18D144M2I148M10D81M1D18M3D14M23I41M2D26M8I18M6D10M1D15M3D50M1I29M12D15M19D14M2I23M3I26M3D28M2I9M17I24M13D6M12D24M7I38M1I26M1D293M2D11M2D17M19D107M 1108/1471 75.3% 1585/94230402 0.0% 247/1471 16.8% 75844497 NA +3397 chr4 + 190214555 110750292 110750291 110750402 111 ATCACTTTTACTTGTTTATAGTAA--TCATATTTCTCCAAGTTATCATTGTAATTCTTTCTGTATTTTACTCTTACATTATTTTTTTTCTTCATTTCTTTTTCCTTTCTAATC chr4 - 94230402 19711288 19711287 19711399 74519004 74519003 74519115 112 ATCACTCTTACTGACCTCCTTCAAGATCAGATATCAGCACAATAGTGTT-TAGTTCTTTTTGTTGTTTACTGTTACTTTATTTTTTATCTTTCTTTCTTCCTTTTTCCTACTC ......:.....x:::.x:xx:..--...x..x..xx..x:x..x::..-..:......:...xx......x....x.........x....:x......::.::..:...x.. 24M2I23M1D63M 75/110 68.2% 112/94230402 0.0% 3/110 2.7% 91039004 NA +3231 chr4 + 190214555 110769788 110769787 110769839 52 AATAAAAGTGCTGAGTTGTTGATGAGGTACAGAAATAATTAGTAACATATTT chr4 - 94230402 61541237 61541236 61541288 32689115 32689114 32689166 52 AGTAGAAGTGCCGAGCCTTTGAAGAGGTGTATAAATAATTAGCAACATATTT .:..:......:...::x....x.....::.x..........:......... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 49228551 NA +30020 chr4 + 190214555 110799322 110799321 110800067 746 AATGGTTATA--------AAAAGCACTTATTTACATCTGTTTTAGTGTAGCCTTGAAGAGTGCAATTAATTAAGAAGTTTCTGGTGTGGTAAGAATAATCATACAGCAGGAATGCAAACACGTGATTTCCAAAGAGAATTTTA-TTCCATATGGTAT---TTTTCCCCTAACTAAGAATTAATTGCAACTTTAAAGAAGGTTTGATTGTGTCTAT--------------------------GAAAAAC---------------------ATTTTAACTACT-GAGGAATTCTAAATGACTTCAATTTAAAATTTTCTTTTTTTACATTGTTAGAGTCAAGAAATAAGTGCTTTCATCAAGCTCTGAGTTACAGAATTTATTAGAGTAAAGGGAAGAGGATAACCTTCAGATGTCTTCTGTGGTGAAATGTTGAAGTTAAAAATTTTAAATGTTTGCAGACTAAAGACATCCTCGGCTGTGAGGCCT---AAAAGAATAAACAAAATGTGACATGTTTTATTTTGTTACTTAACCCTTGTATAAAAAAGCACAACAAAAAATGTATATAAATCATATTTTTATTTCTTTCTGAAAACACGGACATGGATTTTTGGTGATGATCTTCTATGTAGTGGCATCATGCCATAGGTTAAAGAGTGGTTAGTGTGTATGCAAATAGCTTTA----TTTTGGTATGGCAGTTT---------CTTAAAGCAGAAAGTTTTAAAGGTATACAACATAAATTCTGTGAAGATATGTTCTTCTCCTTCTGTTGCAATATGCTACGCATTCCAGTATTTTGCTGTAGCCCAGCA chr4 - 94230402 34927867 34927866 34928664 59301739 59301738 59302536 798 AATGATTATAGTAACTAGAAAAATACTTATTTACATCTGTTTCAGTATAGAGAAATAGGTTGCAATTAATTAGGAAGTTTCTGGTGTGGTCAAAATCATCATATAGGAAGAATGCAAACACATGATTTCCGAAGAGAAATTTAATTCCATATGGGTTGCACCCTCTCCCAGCTAGGGATTAATTGTAACTTTAAAGAAGATGTGATTATGTCTGTTCAAAAATAAAAATAAAAATCAGCAAGAAAAACCCAACCTCCGTGCATACCCGTGTTTTCAATACTTGAAGAAATTTAAATGATTTTAATTTAAACTTTT-TTTCATTACTTTGCTCAAGTTGAGAGA---GTGCTTTGATCAGCATTTGAGTTATA--ATTTATTAGAGTAAAGGGAAGAGGATAACCTTCAGATGTCTTCTGTGGTAAAGCACTGATGCTGAAAATGTTAAATGTTTGCAGACTGAGAGCATGCTTGGCTGAGAAGACCAAAAAAAGAATAAACAAAATGTGACATGTTTTATTTTGTTATTTATCCCCTA-GTAAAAGTACACAAC-AAAAGTAAATATAAATCATA--------TCTTATTCAAAACACTGGCATGAGTTGTCTGGAATGCACCTCTTTGTGGTGGTGTCCTGCCACACCATATATGAT-GTCAAAACATATGCAGTTAGCTTTAAGGTTGTCAGTACAGCAATTTTGCTAAATCCTTCTAGC------TTCTTAATATATACATTGTAAATCCTGGGAAGG-ACGCTTGTATATCCTTATTGACATATGTCATAGACTGTGCTGTTCTGCTGCAGCTCTGCA ....:.....--------....::..................:...:...xxxx:x..:x............:.................x.:...x......:..x.:............:........:.......x....-..........xx.---:::..:..:.:...:.:........:.............:.x.....:.....:.--------------------------.......---------------------:....x.x....-..:...x.:.......:..:........x....-...:x....x...:.x:...::...:.---.......x....:xx.:.......:.--.................................................:..::::...x.:.:.....x.................:.:::...x..:.....x..:.x.:---......................................:...x...:.:-:.....:x:......-....:.:x............--------....x:.x.......x.:....::..x.:x.x:...xx.:...x...:....::..x.....:.xxx..x.x::.-..:.:x:::......:x........----.x.::...::...:...---------...xx...------..:.x..x:......x::.....:...x....:-.:.:.:x.x.x::::.:...xx.....::.::x.:.x::x.:..:.....:...:.x... 10M8I125M1I13M3I55M26I7M21I12M1I33M1D27M3D26M2D112M3I49M1D15M1D20M8D75M1D25M4I17M9I8M6D33M1D60M 548/722 75.9% 798/94230402 0.0% 100/722 13.9% 75871455 NA +3521 chr4 + 190214555 110805656 110805655 110805716 61 ATGGTAAAATTTGGCAAAAAAATCCCATATATACACACACACACACACACACACACACACA chr4 - 94230402 21704649 21704648 21704709 72525694 72525693 72525754 61 ATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ..:.........x:.x.:....:.::.......:::..................::::.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 89101007 NA +3521 chr4 + 190214555 110805656 110805655 110805716 61 ATGGTAAAATTTGGCAAAAAAATCCCATATATACACACACACACACACACACACACACACA chr4 - 94230402 21701076 21701075 21701136 72529267 72529266 72529327 61 ATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ..:.........x:.x.:....:.::.......:::..................::::.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 89104580 NA +4581 chr4 + 190214555 110807027 110807026 110807267 241 ATATTATAACATATAATATGTATATATAATATGTTATATATTATAATATATAATATGTATTATATATTATATAATA-TGTATTGTATATTATATGTATATATATACATATATATGTATTATATATTATATATAATATGTATTATATATAATATATAATATGTATTATATATACTATATGCATATGTATTATATGTATTATATATTATATATAATATGTATATACACACACATATA-TATAAAG chr4 - 94230402 30253315 30253314 30253525 63976878 63976877 63977088 211 ataatataatgtctaaaatatatataatttaaaataaatatcaaa-----taatttatGTTA---GTCATATAAAACTGTAGTATATAGTCTATAGTTA-----AAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTT-------------------TATCTTATGTTTATACATCTGCATTTGCTATAAAG ...x.....::.x...x..:......xxx..x:x..x....:.x.-----....x.:.:...---:.:......x.-....x.:....x.x...:xx..-----.x..x..:......xx.:..xx....:..:...:.......x...x:...:.....:.::xxx::...:..:..:::.....x..-------------------...xx.....x......:x::...x.:-....... 45M5D12M3D11M1I22M5D85M19D27M1I7M 143/209 68.4% 211/94230402 0.0% 34/209 16.3% 80553712 NA +37175 chr4 + 190214555 110815939 110815938 110817055 1117 GTCTT-AAACCCATAAATTTGCGATGTTAGA--------ATGAGTCATTTTTT-ATATCCTTTACAAGCGAAAAAGTACTCAGGCCTGTTGACAAAGCAAAGAAATGGTGTCAAAAATAATTTTAAAACCTTTTGACCTATAAGGTTTAAAAGAATTAGGCACAGATTCTTTGCTTTAAGCCTCTTGGTGACAAGAAATATGGTACTCTGCCAGACTGTTTGATTGACAGTAGCGTTTGTAGTTTCAGCTGCTAATACAGTATGCTTCTTGTATATTCTGGGTGGGTAAATATAGAAGACTATTTGTCACCTGGGTTGATGGATTACAAATAAGTAAGACAATGTGTTTAGGATTCTGAAGCATAAATGAAAAGTCAAAAACCTTATATTATTTACAATATAACGTTTATGCTTTCAGATTTGTTATCCCTATTAC-ATCAATAAAAATGATTGGGTTTTAAAATAAGC-------ATGCAACTCATTTTTAACCATCTCTTTTCATTACATAGTTATTTGCTGCAA---------------------GATAGTATCAATTAAGCATAGAAAAAAACTGATTAGAATGAAGAACTTATTATAGATAGCTGCATTTATTTTTAAAGATCATG-ATTCAAGTATCTTAAAATTTTTCCACTCA--TAGGACCTATGACTAATGACATGTTTCTCCACCCATGAAAAGCTGGTTGTTTT-CAGTACCTAATTAATGTTCAAGCTTATTGTACACACTTATGCTTAGAACGGTGGCATTTCTGAAAAATCTTCTTGGTCAACAGCCCTCTAATAA-----TATTGATTTCTCTTTGTACAACA--------TTTTGAATTTGCTAAGGTGTTACAAGTAGTATAACATAATTTCAAAATGATATCGTGAATGGCTCAGTAATTAATATTTTCAAAGAA-CCGTGCTATTCAAGATGAAAAGATTATTAAGGTGATATTACTGGGTCTTTGGATTTAG-AAAGAAAATTTGCTTTGGAAAGCACATTATCACCTTTCAGGACAAGAAGCAAAATTGGCATTTTTAGCATGCTACTCTTATCTTTATTTGCTGATAAAGAAAGAATCCAGAGTTTTTCAAAAC---------------------------TTTAAATAAAAGCCTATGGTGAGGTTCACATTACCCA---------ATGTTTAAAGAAGAAATAAAA chr4 - 94230402 34938292 34938291 34939461 59290942 59290941 59292111 1170 GTCTTGAAACCCATAAATTACTAATGCCAGACTGTTCCGATGAGCAGCTTTTTGATATCCTTTACATGTTAAAAAGTACTCAGGCCTGTTGACAAAGCAAAGAAATGGTGTCAAAAATAATTTTAAAACCTTTTGACCTGTAAGGTTTAAGAGAATTAGGCACAGATTCTTTGCTTTAAGCCTCTTGGTGACAAGAAATATGGTCCTATGCCAGCCAGTTTGATTGACAGTGGCGTTTGTAGTTCCAGCTGCTATTACAGTATGCTCCTTGTATATTCCTGGTGTGCAAATATAGAAGACTATTTGTCACCTGGGCTGATGGATTATGCATAAGTGAGACATTGTGGTTAAGATTCTGAAGCATAAATGAAAAATCATAAACTTTATGTAACTCATCAGGTGATGCTTAATACTCATAATGAAGTATTCTTATTTTAATCAGGGGAAACCCTCAAACTTTCAAATAAGCAAAGCTTATGTAGCT--------ACCGTGGTGGTTTTTTTGACAGCTACACACTACTAACGTACATCATTGGATTTTTTGACAACCATAATAAAATGTATTGGAAAATTGATTAGTTTTAAGAGACTCTTAC--CCAGCTGCTTTTATTTGTAAATGTCATGTATTCAATCATTGTAGGCTCCAGCCCTTCAACTGGAATTCTTGGCTGATTATGAACCTTTGCATAGGTAGAAAAACACTCGTTTCACATTCTTCAAACTGTTTTCAGCATTTTCACATGGACT--TGCATAGGTT--TATTTTTCCTGAAAGGTCTCCC----------ACCACAAATGGGGGTTTATTCATTTTCCACTCCACCATAATTACAACTTTTGTATTTCCTGAGATGTGGTA-------------AATCTGCAATAACTGCTGGAGATGGTTTTGTAATTAAAATTTTCAGAAAATTCCAGCCTTTTGTGAGAAAAATAGCA--AAGGTGAC-TTGCT-GATTTTTGGATGGAGAAAAGAGAATTTGCTATGAAAAAGGTATTATCACATCCTGAAATATGCAGTAAAATTGGCATTTCCAGCATGCTGCTCTTATCTTTATTTGCTGATAGAGAGAATATCCAGAttttttcttttttctttctttctttttttttttttttGGTTTAAGGGGAAGGGCATGGTTAGGTTCATATTACTCAGCCTTCACTAAGTGTAAAGTACAAGGAAAA .....-.............xx::...::...--------.....:x::.....-............x.:x.....................................................................:..........:.....................................................x..x......x.x..............:............:.........x...........:...........:x....x.:............................:..........::x......:.....x....x...:......................:...x....:....:.x.:.:.:x.x:.:.:.:...xxx:.:xx:..xx:x...:.:....x:-....:x::...:xx.:::::...x........-------...:.:..--------...:.xx:xx..:x..xx.:..:..:x::..:.x.---------------------..:.::xx:...x..:::..xx::....:.......xx.x....:x:.x...:--x:......x.......x....x:.....-......x:..:x..::x.::xx..x:...--.:.:.:::x..:..:..x.::x:::.:.x..:xx:.::...:x::x.:....:-..x.x:::..x:x:.x....:xx..x.:::.::x...--...x...:x:--.:x:x..:......::...:.:----------x..x.x...::-----....x....::.x:.x:..x.:.--------.....x....x..:..:...x::.-------------...:.xx..xx:x.:::.x::....:.:x........x.......:.:..-:.xx..:x..::x..x:....x.x:.--.......:-..:..-.:.:.......xx..-.....:........x..:...:x::........x.::::::.:.x.x..:.............::........:......................:...:.:x.......x......xxxx:---------------------------.....:x::...xx:.....x.......:.....:..---------.x..x.....x.x..:x.... 5M1I25M8I14M1I382M1I32M7I8M8D35M21I53M2D28M1I29M2I53M1I37M2D10M2D22M10D11M5I23M8I24M13D50M1I26M2D8M1D5M1D15M1I123M27I37M9I21M 767/1076 71.3% 1170/94230402 0.0% 135/1076 12.5% 75877647 NA +3650 chr4 + 190214555 110819922 110819921 110820029 108 TAGTTAAACCTCAAAGAGCAGCCCTATGGATCTGGCAATTTTATTCTCAACTTCGTTTTAGAGGTGAGGAAATTAAAGCAAAGACAACTTAAGTAATTTTTCCAAGGT chr4 - 94230402 10729158 10729157 10729261 83501142 83501141 83501245 104 TGATTTAGCCTCACAATAC--CCCTGTGAGGTAGGTAATT--ACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT .::..x.:.....x.:x:.--....:..::x:x..:....--.:.x...:..:.:.....x.....:.:...:.:.:...x.x...:x...........x:...::.. 19M2D19M2D66M 70/104 67.3% 104/94230402 0.0% 4/104 3.8% 100090764 90123791 +23823 chr4 + 190214555 110839656 110839655 110840804 1149 TTTAATGCTAAACAAGCATAACCTATTGTTTGGGAGGATCATGATTGTTTTTTAAAGTCATGTTACAAAGTGCAAAGATGACTTTGTCAAGCAGAGTG-GTAAGAGCTGT------GTGTTGTTAGTAATTGTAAAGGAATAAAGCCCTGCCAGTGCAGGCAA------CAGAAAAG------CTGCCAAAGCTGAAAAGTACCTGGCTAGGTTTTAAAGGACAGGAATACAATACTCTTACTAAGACACACTTTATAAAGTCCAATTCACAGCCAAGGAAAACAGCTTTTGGAGCTTTTGGGTGTCCATAAACAGCTAGATGAATGCAAAGAAGCCAAAACCAGGGATGAGTAGGGTATTTAAACGCTCAACTTGCTCAGCTGCCACAGTGTCCTCCCCACCCACCAAGGCACTGGCACAAAAAGTA---------CCAAGGAACGCCCTACATGTTTGTGATTTATGGAAA--ATCTACACATGGACGACAAAGAAAAAAAATGAAG-----------TATGCATTCAGTTGTTGTATTGTAAATTATGAAAAATATCTGGCTCATTTTCTGAAGGCAATCCTATTACATGA--------------TGCTAG----------------------AGAAAAAGGGAGG-----ATGGTCCAGTATCAACCCTCAGATAATGTGTTGTGGTCATTCAAGTCTTAGGCGACAATTGCTCACTGATAAGCCAGTTCAAGCATTTTCTTAGCCAAGATACTTCATAAACCTTGCCAAGAGAAAAGGGCATGTGGCAGTAAGTTGTAAAGTGATAAAAAGCAGACATGGGTGGAAAATATTTTATCAAGAAAGATAAAATAAAGAAATTATATGGATATGATAACAGCACAACAAAGAATATTTTATAGAAA-----AAATCTTGTAATG-TTGCCAACTACTAAGGCAAAATGAATGAAGAGCAAATGGGTTGTATTTCAAACACATACCATTACACTGAGCAACAGTAACATTTTACTACCCGAGTCACATTTTTTGACTGATGCAATAAAATTTGCAATATTCAAAGAAAAACATAGGATTTAT-----------------------------ATCTTTTTTAACTTCAATTTTAAAAATGGATTTTATGGTTAACAATGCAATAAAAAAGGTTTTGAAATGTTT-TGAATCGTGTTATAGTTCTGAGGAAGC--ACCACACTATTAACAACCAAAGCA--GAAATATGGAGTTTCCTATGGTTGTTAGACT chr4 - 94230402 34951497 34951496 34952705 59277698 59277697 59278906 1209 TTTGCTTTTTAGCAGGTATGACATTCTGCTCGGGGGAA-----ATTGTCTTT-GAATTACTTTCACTATAAGCCAAAATCA-TGCATGATTTAGAGAGAGTAACAGTTGAACAGCAGTCTTCATTGTAATGGTAAAGGAA--AAGACATAA-AATGCAGTCAAAGCTATCAGTAAAGGCACTACTGCCAACTCTGGAGAGCACCTGGCTGGGTATTAAAGGACACAGATATGATCCCCTTACTGAGCAGTATTTTATAGACTGGAGTTCACAGCCAAAGAAAACAGCTTTTGGAGCTTTTAGATGTCCATAAACAGCTAGATAAATACTGGGA-GCCAGAACAAGGGATAAACAAGGTAGCTGAGTA-TCAGCTTGCCACACTGCCATTTGGAGCTCCCTGAATACCCAG----CAGAACTTAGAGTATATTTACACCTCAGGGTTCCCATTGCTTTTCATGATTCCTGGAGGTGGTGTCCCTAAGGGCGG-AGGGAGGGTCAATGGAGCAATGTCATGATATAAACTCAGGCTGTGTCCTGTCA--TCTGCATAATTGCTGGG--ATTGCATG--GTTGACCATATTTCATGCGAGTTGGCAGTGACTACTAGTCTGTAGTCAGAACGGGGATTTGGAAGAAGAGCTGCACCTATGGTCTCTGATCT-CCCTCTTGTAGTG-GCTGCCAGCATTCAAAGCATTGCAAACGAGT-TTCATAAACAAATCTCATTAAATGTTTTT-------AGATA------------------GAGGAAAGG-CACATGGCCATAAATAGAAAGTTGATAA---GTGGGCAACTGTTAAAAATAGCTCATTAAGAAATGACAAGTGGAGAAATAATACGAATATGATAGCA------TAAAGAATATTCTACGCACATACCTGAAGCCTTTAGTGGTTGCCAAAAACTCTCGTGAAGTGAATGAAGAGCAAATGGGTTGTATTTCAAATACATACCATTACACTGAGCACCAGTAACATTTTATTGCTTCAGTCACATTTTTTGACTGAAGTAATAAAATTTGTAAAATATAAAGAAAAACACAGGATTTATCTCTCCCTCCTGTCCTATTCTGTCTCCCCACCTTTTCTTATTTTAAATTC-AAAACAGATCTCATGGTTAACAGTATGGCCCTCAGGTTATGGAGATGTTTAAAAATTGTTTGACAGATTCAAAGAAGCTTGTAGTTCTGTACATAACTAGAGTACTAAGACATACTTTTTCATGTGAATTTTAGACT ...:x.x:.x.:..:.:..:..x.x:..:.:...:.:.-----.....:...-:..x.xx.x.:..x.x:x..x..:..x.-.x::.x.xx:....x.-....x..:..x------..x..xx.x.....x.........--...x.x.:x-.:.....x...------...x....------.......xx...:.:..:........:...x..........x::...::..x.:......:..xx::.:......:.x.xx.:...........:......................:.:...................:...:.x::..-....:...x......:.::.:....x:.:.:::-...:.....:xx:......:xxx.xx.....::xx:...x..----::.x..xx.:....---------.:x...:x:x..x.xxx.x..::.....:x....::--:.x.x.x:.x..:..:-.::..:::xx....:..-----------...:x.:....x:xx...x:...x.--.x..x.x...xx....x--...x:x..--.x::.:.x....x....x--------------.:....----------------------:...:...:.xx.-----......:xxx...x-.....xx:..:..-.:..:x:x.......:x.x.x.xx:..:.x.-:...:x:.:..::.xxx.:..:::....:-------.....------------------...:.....-..::....x:...:.x.x..:x......---.::.:..xxx..x:......x:.:..:......x:xx..:.::......x...:.:........:..------:..........:..::x.x.-----:..x.:.x..:..-.......xx...xxx.::..:...............................:....................x.............:.:.::x...................x.:...........:..x..x:...........:.........-----------------------------.:.....:.x.:..:..x..:-....::...:.:..........:.:::::xxxx.:.x.x.x..:......-x:...:..x.x.:..x.:::.:.....--::x::x..:.xx.:...:.:..:.--:.:.:..:xxx....x.:..:x.x....... 38M5D9M1D28M1D16M1I11M6I24M2D9M1D11M6I8M6I150M1D33M1D42M4D14M9I36M2I16M1D17M11I25M2D17M2D8M2D18M14I6M22I13M5I14M1D13M1D31M1D29M7D5M18D9M1D28M3D67M6D20M5I13M1I156M29I21M1D50M1I27M2I24M2I31M 735/1087 67.6% 1209/94230402 0.0% 184/1087 16.9% 75888159 NA +3106 chr4 + 190214555 110843768 110843767 110843826 59 CTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx...x.xx.x........:..x.........:......x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 92646629 NA +6946 chr4 + 190214555 110846284 110846283 110846501 218 AGTATAATTTATTCTAACCCCTTGATGGAATAATTTATACTCTTGAGATACTCTTGAAATGTGTAACCAATGGGGAACTCTATTTATACATAAGTTTTTACACATCTTTCAATTAGATAAGAAATCCAAGTGCAAAACCCATCACTCAAGGAAAGCATATGAGTTTGTAACACTCCCGAGAGGTTTTTTGGTCCATAAACCAATAAATGGATTACACT chr4 - 94230402 57278414 57278413 57278628 36951775 36951774 36951989 215 AGCATAAATTAAGATTGACCTCAGCAGAAATAATTTACGCTCCTGAGGCACT--TCGTGTATGTAGCCAGGAGGGAGCTGTCTCACTGTATGAATTTTTACACATCTTTCAGTTAATTTACAGATCTG-GTGTAAAATTAAATGCTCAAAGACTTCATAAATATTTGTGGCACCCTCTAAAGGACTTTGGGTATATAAACCAATGCATCAATTACACT ..:....x...xxx.x:x..::x.xx.:.........::...:....::...--.x:x:.:....:...:x:....:..x.x.:xx.::..:.:.................:...:x.x.x.:...::-...:....::x.x::.....:..xxx....x:x:.....::...:.:.x.:...x:...x...x:..........:x..x:........ 52M2D74M1D89M 139/215 64.7% 215/94230402 0.0% 3/215 1.4% 53567870 NA +51725 chr4 + 190214555 110850816 110850815 110851915 1100 TTAAATAGAAGCAAACTGATCCTCCTATTAGCAAGTCTAAATC-------------AGTAGAACAACATCTATTTTCAGAATCTTTGTAGCTATAAAGGGACCTTTACAGTTTGCAACACTTTGACCCGTCCCAAAATGACAGCATTCTGTTACAAATAGATATTAGGGACTTGGTGCCAGCGTCTCTATTGTGGAACCTTTGGGTTGGGAAAGCCGACAGCTGGGAGGAGTTCAGTGTTTTGAAGGTTATGATCACAGCAATTTCATAAGTGCTTTATTTCAGTTCTCTTCTGGCTGCAGAAGGGACAGGTGCGGTCTGGTTCTGATTTCACTGGTCTTAATTTCTTATCTGACCTGGTAGTCAATCAAGGGCATGAGAGAGGGGGAATGAGGGAGAGGTGGATGCGTGGGAGAGAAGAGCTGGGGACTCTAAGCTGCAGGGGGAGGGGTGCATGCATCTGCGAGGCACTGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTGTGCGTGTGTGTGTGTAGTGCTAAGCATCTGACTTTTCTCATCGAGGAACTGGCAGCTCTGCCTGTCATTCCGCACTTCTGTGTATACGAATGCTGCCCTGTGCAAAATGGATTTCTGAGTGTTAACCATCATGTTCTTCTTTTCCAAAGGGTCTTCTGTAGGATTTCATTTGCAGAGCACAGAGGGCAATATCTAGGGTAATTCCAGGGCTTAGTGGCTGTGATCTTTTGTCAACTCTCCTTGTGAGAGAAATTAAACTTGGTATGGGCACCCACCATTGCAGCAAGTGCAACGCCATTCCTGGCCAATGGGCGGGAAATCATAAACCTGACGAGTATTTATGAGAGGGAAAAATGAGATGTCATAATATGACAAGAATATATTCATTAAATCTTTCAATTTCTCAGAAACAGAGAATTCCCACTTCAGTAAAAGGCTTTGAGCAGATTTATCAAGTCTGACATTCTTACTTTTATGAGATTTGA-GTCTCTATGCTAAAATGAGATATATTTAAAAGGAGGACAGCCTTTCCAAAGGAGGAAAACTCCTAAAAAGGTGGAGATAA-----TATAACACTAGCCATTGTTCCTTTGATGGAATACTAGATAATGCCT chr4 - 94230402 34956220 34956219 34957248 59273155 59273154 59274183 1029 TTAAATAGAAGTAAAGCGATCCCTCTATTACCAAGCTGTAATCTGATGAACTCAATAGTAGAGTCATGTCTATTTTCAGAAGCTTTGTTGCTAAAAACAGATCCTTGCGCTGTGGACTGCTTTCGCCTTTCCCAAAGTGACAGCATTTCATTGGAAATAGCTGGCGGGGCCCTCCTGCCCTACTCCCCATTGTAGTGCCCGTG---CGAGGAAGCAGACAGCTGG-AGCAGCTCGGCGGTTTGAAGGTTACGATCGCAGCAGTTTCGTAAGCGCTTTATTTCAGGGCTCTTCTGGCTGCGCTGGGGACAGGTGCGGTCTGGTTCTGATTTCACTGCTCTTAATTTCTTATCTGACCTGGTAGTCAATCAAGGGCATGAGAGAGGAG---TGAGAGAAAA-------CGGGAGAGGGGCAGGCTGAGA-----------CAGACAGACGGACGCG---------------------------------------------------------GAGTGCGGCGC--AGCATCAGACTTG-CTCGCC-CGGAGCCGGCAGCCCTGCCTGTCATTCAGCGTGCCTCTGTGTACTGACGGTGCCCTGTGCAAAATGGATTTCTGAGTGTTAACCAGCATGTTCTTCTTCTCCAAAGGGTCTTCTGTAGGATTTCATTTGCAGAGCACAGAGGGCAATATCTAGGGTAATTCCAGGGCTTAGTGGCTGTGATCTTTTGTCAACTCTACTTGTGAGTGAAATTAAACTTGGTATGAGCACCCACAGCCTGAGCTTGTGCAACACAATTCCCGGCCAATGAGTGAAAAATCATAAACCTGACAAGTATTTATGATGGAGGAGAATGAGAAGTCATATTATAACAGGAATATATTCATTAAATCTATCAATATCACAGAAACCAAGAATTCCCTCTTCAGTAAAAGGTTTTGAGTAGGTTTATAAAGTCAGATATT----CTTTTATGAGATGCAACTTTTTTACGCCAAAACACATTGTGTTTAAATTCAGGTCAGCATTTTTGAAGAGGGAGAGTTACAAAAAGGGCTAAGTTAATGGGGTGTTACAGTAGCCACTCAATTTTTGAGAGGATTTTGTACAATAGCT ...........:...x:.....::......x....::xx....-------------......::x.::.............x......x....x...x:..:.:..:.:x.x..x.x::....x:..:x.......:..........:::..:x......x.:x::...x.:.xx....xxxx..:.:.....:.x:..:x..---:.:.:....x.........-..x..:..:.:.x...........:....:.....:....:....:............xx.............:xx:................................x................................................:.---....:..:.:-------..x.:...:.:x::....:.:-----------...:x:..x..::..:---------------------------------------------------------.x...::.:..--......x.....x-...::.-x...:.:......:.............x..::x:..x...:...x:.:.x...................................x............:................................................................................................x........x..................:........x:::xx...xx.......:.x.....:........:.:.::................:...........x:.:.:.:.......x......x...:...:...................x.....x..x.......x:.........x.............:......:..:.....x.....x..:...----............x::.-x.:.:..:..:....::x:x.:.:......xxx...x....x...:::...::...:.::.x.x....:..:x:..x...-----.:.x...x......:.xxx::.....x:.:..x:.:x.:...:x.. 43M13I147M3D19M1D160M3D10M7D21M11D16M57D11M2D13M1D6M1D422M4D16M1I80M5I46M 790/1010 78.2% 1029/94230402 0.0% 109/1010 10.8% 75894596 NA +6153 chr4 + 190214555 110864485 110864484 110864677 193 TTTTGCCTTTTCTTTATTTTGAAGTCTAAACGGATCTACCGAAATATTTAACTGGCTT-------------TGTTTGTCTTCCAAGGATAAAGGTT------------------------CTTTAGGGGACTATGCCACCCAATTGCTCTATTGCCCTTTTAATTTCCTTTTAC-TTTTTCAGAACTTCTCTACTACCCTTAGGAAGCATAGTAATTAAATTAGGGTAAAA chr4 - 94230402 34960353 34960352 34960579 59269824 59269823 59270050 227 TTTTGTCTTATTTTTAGTT----ATCAAATGAAATAAAAAAAAATATTTAGCCAGCTTGAGTGAATTCTTTTATCTCTCCTTAGAGGATAAACTTTTGTCAGAGTCCCTTAATGTTTTTCCTTTGGAGAAATGTTCTGTAAGATTGCTCTGTTGCCCTTTTAATTTCCTTCTACCTTTTTCTGAACTGCTCTGTTGCCCCAAGGTAACATGTTAATTAAATTAGGATGAAA .....:...x.:....x..----:..x..xx::..xx.xx:.........:.::....-------------.:.:.x..:.:x:........xx..------------------------....:.:.:.x.:.x.:::xx:........:...................:...-......x.....x....::.:...:x...x.:...:x.............:.:... 19M4D35M13I25M24I54M1I56M 135/189 71.4% 227/94230402 0.0% 42/189 22.2% 75904132 NA +4545 chr4 + 190214555 110868989 110868988 110869130 142 TTCTTTGTTTAATTGTTTCTAAAAGATAATTTCAACAAGTTCTGCACCAATTGCTTGCTTGTGAGTGATTTGTAGAAAGAAGGCTTGCACCTTATCCTTAGTGATAACTCCAAATAGCTTTCTAATACCCAGACTCTCACAG chr4 - 94230402 34964990 34964989 34965117 59265286 59265285 59265413 128 TCCTTTGTTTAACTGCTGTTATAAGCTG-------------CCGCGCAAATTGCTTGGCAGAGGGTGATTTGTAGTGACAAGGCTTGAACCTTATCCCCAGAGAT-TCACCAGATACCTCTGCAATGCTTTGCATCTCTCAG .:..........:..:.x:..x...x.:-------------.:..:.x.........x:x.x.:...........x:.x........x.........::..x...-x.x...:...x..:.x:...:.::x.xx....x... 28M13D64M1D36M 91/128 71.1% 128/94230402 0.0% 14/128 10.9% 75903999 NA +3058 chr4 + 190214555 110881311 110881310 110881360 50 ATTGATCTCTCTCTCTCTTTCTTTTTTTTTTTGTTTTTGAGACAGGTTTT chr4 - 94230402 63778259 63778258 63778308 30452095 30452094 30452144 50 ACTGCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTCCTGGAAGTAGGCTTT .:..x.............:.............x.::.x..:::...:... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 47103052 NA +3738 chr4 + 190214555 110882267 110882266 110882334 68 AGCTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATACACCAC chr4 - 94230402 18197137 18197136 18197202 76033201 76033200 76033266 66 AGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ....:.:...........x...x..x.x........::::.........:.:....--.:.:...... 56M2D10M 52/66 78.8% 66/94230402 0.0% 2/66 3.0% 92685130 NA +3090 chr4 + 190214555 110883470 110883469 110883528 59 ATATATTATATATATGTGTATAAATATATATGTGAATATATATATTCACATATATATGT chr4 - 94230402 56721735 56721734 56721791 37508612 37508611 37508668 57 ATGTAATACATATATGTAT-TAAATAC-TATGTAAATATGTATACTAACATATATATGT ..:..x..:........:.-......:-.....:.....:....:.x............ 19M1D7M1D31M 48/57 84.2% 57/94230402 0.0% 2/57 3.5% 54161735 NA +3050 chr4 + 190214555 110883703 110883702 110883741 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651431 NA +3050 chr4 + 190214555 110883720 110883719 110883758 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651448 NA +3050 chr4 + 190214555 110883737 110883736 110883775 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651465 NA +3050 chr4 + 190214555 110883754 110883753 110883792 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651482 NA +3050 chr4 + 190214555 110883771 110883770 110883809 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651499 NA +3050 chr4 + 190214555 110883788 110883787 110883826 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651516 NA +3050 chr4 + 190214555 110883805 110883804 110883843 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651533 NA +3050 chr4 + 190214555 110883822 110883821 110883860 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651550 NA +3050 chr4 + 190214555 110883839 110883838 110883877 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651567 NA +3050 chr4 + 190214555 110883856 110883855 110883894 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651584 NA +3050 chr4 + 190214555 110883873 110883872 110883911 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651601 NA +3050 chr4 + 190214555 110883890 110883889 110883928 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651618 NA +3050 chr4 + 190214555 110883907 110883906 110883945 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651635 NA +3050 chr4 + 190214555 110883924 110883923 110883962 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651652 NA +3050 chr4 + 190214555 110883941 110883940 110883979 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651669 NA +3050 chr4 + 190214555 110883958 110883957 110883996 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651686 NA +3050 chr4 + 190214555 110883975 110883974 110884013 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651703 NA +3050 chr4 + 190214555 110883992 110883991 110884030 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651720 NA +3050 chr4 + 190214555 110884009 110884008 110884047 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651737 NA +3050 chr4 + 190214555 110884026 110884025 110884064 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651754 NA +3050 chr4 + 190214555 110884075 110884074 110884113 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651803 NA +3050 chr4 + 190214555 110884092 110884091 110884130 39 TCTCCCATATATATATATCTCCCATATATATATATCTCC chr4 - 94230402 24232272 24232271 24232310 69998093 69998092 69998131 39 TCTCATATATATATATATTTCCCATATATATACATCTCC ....x:............:.............:...... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 86651820 NA +3001 chr4 + 190214555 110884234 110884233 110884273 40 TCTCCCATATATATATATATCTCCCATATATATATATATC chr4 - 94230402 24232270 24232269 24232309 69998094 69998093 69998133 40 TTTCTCATATATATATATATTTCCCATATATATACATCTC .:..:...............:.............:..x.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 86651964 NA +3344 chr4 + 190214555 110884281 110884280 110884329 49 TATATATATATATATCTCCCATATATATATATATATATATCTCCCATAT chr4 - 94230402 19659970 19659969 19660018 74570385 74570384 74570433 49 TATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATAT ...:.............::..:......x...x.........::..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 91224311 NA +3378 chr4 + 190214555 110884297 110884296 110884354 58 TCCCATATATATATATATATATATCTCCCATATATATATATATATATATCTCCCATAT chr4 - 94230402 19659961 19659960 19660018 74570385 74570384 74570442 58 TTCTGTTTTTATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATAT .:.::.x.x...:.............::..:......x...x.........::..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 91224336 NA +3378 chr4 + 190214555 110884322 110884321 110884379 58 TCCCATATATATATATATATATATCTCCCATATATATATATATATATATCTCCCATAT chr4 - 94230402 19659961 19659960 19660018 74570385 74570384 74570442 58 TTCTGTTTTTATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATAT .:.::.x.x...:.............::..:......x...x.........::..... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 91224361 NA +3144 chr4 + 190214555 110893384 110893383 110893431 48 CTCCTGGGTTCAAGTGATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGA chr4 - 94230402 18197139 18197138 18197186 76033217 76033216 76033264 48 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGA ..:.............x...x.xx.x........::............ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 92696245 NA +43125 chr4 + 190214555 110899624 110899623 110900655 1032 AGTGCTCAAAAGATAACCATGCTTCATGCTAAAGCACCATGAGTTCAAGTTCTACCAAGGAGGACACAAAGG--AAACTCTGAGTGCACTGCCCACTTTTAAAATATGAATTGCTAAAAAAAGAGATGCTGAAGTTTAAAATAACAGCATGCAGATTTCTTTATAGAATTTAAAGAATGGAAAACACTTGCAAAAATATCGGCAGGCAGAGGCAGGAAGAACAAACGGTAACCAAATTGGTTCCTGTGACAAACCATAACATTTACTTTAAACCATCAGTGTGCTACTCAGTAAAAGGCAGGCTACCATTCTTTTAATAGATCCCAGGCCTTGTTAAACTCACTGGTCTGCAAGAATTACCCAGGTCAAGAGCAGGTCAAAAAGTGAAAACCCATGTGAAAGTAAACTTTGAAATATCTGCTTTTGAGGAGACTCAGCCGACTGTCTCCTCTGCAGTAAATACACTTCCGTTTTGTGTATGATATTGTTCAATATACTGTACTTAAAATACACACAGGTAACATAAACGGCACT-------------------ATGCTATTTTATATCCTTCCTA-TTAAGTGCAATTTCAACCTCTTCTGTAG-----------------TTTGTGAATC-------------------TTTCT---TATGTAC-----------------------------TTTCTAAA------------------------------------------------GCCTTAAAA------------AAAACCC---------CACTAAACT-------------------------------------TAATAAAGAGAAAGTTGTTAC-----------------------------TCTGTTTTGA--------------GTAGTTGCTTCTATTTT-----------------------GTTTTAAAATATC--TATGTT--------CTATTTAAAACTAGACCTTTGATTCC--CTCATAGTCA-----------GAATAAAGAAGCTGGAGGGTG--------ACTCACTG--TGGAATTTATTTGCCTGGTAAACTGGGTATTAATCTGGCCTACAATACACTTGCTCCAGATTTTGTTCAAGTGTAAGGTCATACTGTGAAGCTGTTTTTCATTTTGTTTTATATGTGTTAATATAATGCCTTATGAATTACCCTAGAGTTTTGTTCTGACAGCTAAAAAGCATAATCGTTTTTCCTTTCAAGGGGATTGAAAGCAAAGCAATTCACTCTATATTTGAAATGATTTATCTAAGATCCTTTCTCTCACATCTTGC chr4 - 94230402 34976650 34976649 34977961 59252442 59252441 59253753 1312 AGTGGCCAGAAAAGAAGC-----TAATGGGAGTGCACTTTGGGTTCAAGTCCTCCCAA--ATGACACTTGGGTTAAACTTTGAGTGTGCTGCCCAGTGTTTAAATATGAACTACTCAAAAGAAAGATACAGAAGTTTAAAATAACAGCATGCAGATTTCTTTATAGAATTTAAAGAATGAAAAACACTTGAAAAAATATCAGCAGGCAGGGGCAGGAAGAACAAACGGTAACCAAATTGGTTCCTGTGACAAACCATAACATTTACTTTAAAGCATCAGCGTGCTAGTCAGTAAAAGTCAAGCTACTACTCTTTTAATAGATCCCAGGCCTTCTTAAACTCACTGGTCTGCAAGTATTACCCAGGTCAAGAGCAGGTCAAAAAGTGAAAACCCATGTGAAAGTAAACTTT-AAATATCTGCTTTTGAAGAGCTATTGCAGACTGTCTCCTCTATAGTAAATATACTTCCTCTGTTTGTATGGCATTATGCAGTATGCTGTACTTAAA----ACTCAGATACTTTTTACACCATTTTCTCATTTAGGAATTATAATGCTCCCTCATTACATTTTTACTTAAGCTTGATTT--ATTTTTTTTATGGGATTGGATGAGAAATTTTTAATGAACCATATCACATTTATTATAATTTTCTTGCTATTTACTATATTGCTTCTCTGTGTTAAAGACCTCTTTTTTAAACAATGCACGTGCAAGTGCCTGTCCGTAAGTTGGATTTTTAGGGCTGCTGCCTGAAGACAGTACAAGGCCAAGACCCAGGCACTGACAATAAAATCCCGGGCTTGATTCCAAAATTGCAGACCATAGTGCAGTGATATGGGGTATGTTTTTACAGTCCCttttcctttttttttttttttttttttttttGACATCACTGGCAGACATATTTCCTTTTTTTTTTTTGTGTGTGTGTGTGAAAGATGATTCCAAAATATCAGTGTGTTGTACGTTGTTACTTTGAGCTTCTGCTTTGAGTCCTATTTGGAGTTGATGTCTTCCTTGAGCTGACACGTTGAGGAGAGCCTGACCAACCCGCTGGTTTGAATTTATTTGCCTGGTTGAATGGGTATCAGTTTGGCCTGCAATACACTTGCTGCAGCTTTTGCTGGAGTGAAAGGTCATTCTCCAGAGCTGTTTTTCATTTTGTTTTATATGTGTTAATGTAATACCTTATGAATTACCCTGGCGTTTGGTCCTGACAGCTAAAAAGCATAATCATTTTTCCTTCCAGGAGGACTGAAAAAAAGGCAATCATTCCTATTTGGAAGATGATTTATACAAGAT-TTTTCCCTCATCTTTTGC ....x:..:..:.x..x.-----.x...xx.:x....:x..:........:..x....--.x.....xx:..--.....:......::.......x.x..x.........:.:..x....:.:....:.x.................................................:..........x.........:........:..............................................................x......:......x..........x..:.....:.:.......................x.....................x.......................................................-................:...x:x:x..x.............::........:......x:.x.x......::...:.x..:...:...........----..x...:..x:x.xx..:x..:.-------------------.....x::.:..xx.x..::..-.....:x::....--.::.:..:.:.:.-----------------..x:....:.-------------------.....---...x...-----------------------------...:....------------------------------------------------....x..:.------------..:....---------..x....x.-------------------------------------.:...x:.:.x.x...x....-----------------------------.:.x......--------------:..x..x...:.x....-----------------------:..::........--.:....--------:..:..x:.:..xxxx......x...--:.::x...::-----------..::x:.x.x.:..::.:.x.--------..:.:...--.x.................x:.x.......:.:.:......:.............x...x.....:.x:....x........x..x:::.................................:....:................:.x....x..:......................:.........:..:.:...:.....:x..:.....:xx::....x.xx:.:.........x:.....-:....:....:x.:.... 18M5D35M2D12M2I336M1D96M4D23M19I22M1I13M2D13M17I10M19I5M3I7M29I8M48I9M12I7M9I9M37I21M29I10M14I17M23I13M2I6M8I26M2I10M11I21M8I8M2I244M1D18M 815/1017 80.1% 1312/94230402 0.0% 310/1017 30.5% 75922974 NA +35414 chr4 + 190214555 110904725 110904724 110905289 565 AGCCTGGGTAACGTCTTTTGTATTGAAAGATCACACTGGAGACTGTTTATTTACAATGGTCTAAACATGCGTATCTTTATGGCTT-TCTCCTGTCACAATGAATCATCAGCTATAAGTTGTCCTTTGTTGGTTTTAGGAACAATCAAATGAAACCCAGCAGGAGATTGTAGAGTGCATTGTCCAAGAGTGTAAAAATGCTGTGTTGATGACAGATCATACTGTTTTTATTAAAGCTAAGAACATTGACTTTACTTTGCTTTTTGACCCTGGTACTCTACTGTCAAGGTGATTTTATTTCTACAAATTTTCGTTCTGCTGGCCTCATCAATGATTCACCATAAAACATTAGACAAATTCCCATCATCTGTATATGATTATAGCAGATTCTGTGGTGCTGCTCACTGCAACTAAAAAGATGTTTTTCAGCTTTGTCTAAAGGGGAATCTATTTGCTAACATTCTTCCTTTGCACAATGTCTCCTTGTTTTAATAACAAATTA-------------TAAAATGATTTGAACTCAATGTAAAGTATCCTAGTGTGTCATTTAATAACATCTGCTAAAAAGTTT chr4 - 94230402 34980061 34980060 34980638 59249765 59249764 59250342 578 AGCCTGGCTAATAGTTTTTCTGTTGAAA-ATGGCAACGTGGGCTGTTTATTTACAGGGATCTAAACATGTGTATTTTTATAACTTCTCTGCTGTCATAATGAATTACCAGCCATAAGCTGTCCTTTGTTAGTTTTGGTGAAAATCAAATGAAACCCAGCAGGAGCTCCCAGAGTGCATTGTCCAAGAGTGTAAAAATGCTGTGTTGATGACAGATCATACTGTTTTTATTAAAGCTAAGAACACTGACTTTACTTTGCTTTTTGACCCCAGTGCTTTACTGTCAAGGTGATTTTATTTCTACAAATTTTCCTTCTGCAGGCCTCATCAACGATTCACCATAAAACATTAGACAAATTCCCATCATCTGTATGTGATTAGAGCAGGTTCTGTTGTGCTGCTCGCCACAACTAAAGCGACGTTTTTCAGCTTTGTCTGAAAAGGAATCAGTTTACCAGCCTTCATTCATAACACAATGTCTCCTTGTTTTAGTACCACTTTCCTTTCGTTCTTTTTAAGCTGATAAGCACATAATTGAAAGAATTTTAATGCATTGTTTGCTAAAGACTGCAACCAATTTT .......x...::x:....x.:......-..x:..x:.x:.:.............:x.:..........:....:.....::...-...x......:.......:.:....:.....:...........:.....:.x:.x.......................x.:x:..........................................................................:........................::..:..:..................................x......x...........:.........................................:......x.....:......x.........:.::........:x..:.................:..::......x:...:.:.:.x...x.:.x.x:....................:..x..xx..x-------------...:x....xx.x..x:...xx....x..::..:..::.::...:x...x:x....x.xx..x... 28M1D56M1I414M13I66M 465/564 82.4% 578/94230402 0.0% 15/564 2.7% 75924664 NA +3168 chr4 + 190214555 110910009 110910008 110910096 88 TTTTCTTTCCTTCGTTTTCTCTCTCTTC------CTTCCCTCCCTTCCTTCCTTGTTTCCTTCCTTTTTTCCTTCATTCTTTTGTTCTTTCTTT chr4 - 94230402 32546772 32546771 32546865 61683538 61683537 61683631 94 TTTTCTCCACTCCTTGATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTT ......::x..:.x.xx.x...::..x:------.x...x...........:..:...:...:.....::x.x..x..:..x.x.....:.... 28M6I60M 61/88 69.3% 94/94230402 0.0% 6/88 6.8% 78363237 NA +3005 chr4 + 190214555 110910029 110910028 110910073 45 CTCTCTTCCTTCCCTCCCTTCCTTCCTTGTTTCCTTCCTTTTTTC chr4 - 94230402 82050850 82050849 82050894 12179509 12179508 12179553 45 CCCTCTACCTTCCCTTCTCTCCTTCCTTGTTTCATTATTTTTTTC .:....x........:.::..............x..x:....... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 28859179 NA +27772 chr4 + 190214555 110913391 110913390 110913817 427 AATGCTGACTTCTGCGTTTATTTTCTCAAGGAAAACGGCACACATTTCAAACATTTCAAATGCATATTTTGTTCTAAAAGCCTTAGACCTATTAGG--AGGCAGAGAGTAACTTTGTTCATAGATTGCCCTCAGAATAAGTCGTGAGTTTTAGGGATAAGCCAAGCTGGCATGCAAAAGGGGTTGCTGTTGATCTTTTATACTAATTTTGGATTAATTGTGATCTACAGCACTGCGTAAACATGCTATCCTAGTGCTTTAGCTTCTCCACAGCTAAACATTAATCCTTCTTAATGCTCTAAGTCAACTTTTAGTCCTTAGCAGAATTTACCTTAATCTCTGGGTAGTAAGTTAACTGATTTACAAAACATAATCCATGAGC-CCAGAATCTTAAGG-ATGTGTGAACAGCAGCAACCTACCTTTACAGAAT chr4 - 94230402 34990168 34990167 34990597 59239806 59239805 59240235 430 AGTACTGACTCCTACATTTATTTTCTCAAAGCAGAGGGCAAAGAAGCTAAACATTTAAAATGCATGGATTCCCCTGCAAGCTTTAAACCTATTAGGGCAGACGCACGGCAACTTTGCACACAGATTGCCCCCAAAGTAAGTCTTGA-TTTTAGGACTAAGCCAAGCTGGCATGCAAGAGCAGTTGCTGTTGATCTTTTATACTAATTTTGGATTAATTGTGATCTGCAGCACTGCGTAAACATGCTAACCTAGTACTTCAGCTTCACCACAGCTAAACATTAATCCTTCTTAATGCTCTAAGTCAACTTTTAGTCCTTAGCAGAATTTACCTTAATCTCTGGCTAGGAAGCTAACTGATTTACAAAACATAATCCAGGAGCTCCAGAATCATAAGGAAAATGTGCAGAGAAGCAATTCACCTATGCAAAAT .:.:......:..:.:.............:.x.:.x....x.x.xx::........x........:xx..x::..:x....:...:..........--..:.:x.x:.:.......:x..:.........:..:.:......x...-.......:x....................:..x:............................................:.....................x......:...:......x............................................................................x...x...:.........................x....-........x.....-.x:....x.x..x.....:::....x.:..:... 96M2I48M1D234M1I14M1I34M 361/426 84.7% 430/94230402 0.0% 5/426 1.2% 75923223 NA +3587 chr4 + 190214555 110916231 110916230 110916408 178 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTT------TTTTTTAAACTGTGGTTTCTCTCTTG-AGAGTTGATTATAGAGAGGTAAAGGTTGAAGCTGGGAGAAATTTAGAAAGTATTGCATGTTCCATGCCTGAGCAGAATGTT--TGTCATGTTGATGCTAAATGT------GTTTTACTGTCTAC chr4 - 94230402 60784262 60784261 60784447 33445956 33445955 33446141 186 GTTTTTTGTTTGTTTGTTTGTTTTATTTTTGTTTTTACAATGTTGCTTAAACAAAAATAGCTCTTAAGCAGCGCTAA--ATGAGGCGGTAAAGCACGGTGTT---AAACACTGCAAAACTATTGCATTTTGAA--ACGGGGAAAAATCTTTATGTAATGCCGATATTATAAGTATTGGCGCTTGACTTTCTAC ........................:...........------..x:......x:x::.xx....:xx.-..x.:.:.--..:::.x.......xx:.:x.:.---.:.x.:.xx:...x........x..xx.--x.x.:.x.:...x..--...x...::...::..x.x..------.:..x...x..... 36M6I26M1I8M2D23M3D28M2D15M2I21M6I14M 119/171 69.6% 186/94230402 0.0% 22/171 12.9% 50131969 NA +9772 chr4 + 190214555 110921059 110921058 110921337 279 ATATGCATGTGGATAAGAAAAATATGTAGGAAC------TTAGTTACTCTTAGTTGACAATATGAAGTGTGATAAAGGAGAGTAATAA-GGTTGGTAAACCTCTAAGTGATGTCAGCGTTTCATGC---GCTCCTTGTAGGATATTAGCCACAGACATTTGTGTTATTTATTGCTGTCATTATGCATTTTTTTCATCCATGGCAACCTCTCATAAACCATATTGTTAGTTCAGATGATGAAAGATACTATTTCAGATTT-TGGTTTAA-------AGGATCTTAATGATATTTTTAT chr4 - 94230402 34996032 34996031 34996324 59234079 59234078 59234371 293 ACACTCAGATGAATAA-AAATATATGTATGCACAAGCGATTTGCTGTGATTAGCTGACAAGTTGAGGCAGGATGCAACA-CTTAATAATGGCTAATAAACCTCTAAATGATGTCAG--TCTATTGCAAAGCTCTTTTCATGATATTATCAGCAGTCATTAAAGTTATTTATTGCTGTCATCATGCATTTCTGTTACCCGTGGCAACTTGGCAGAAAGCACATTGCTAGCACAGCTGATGATAGATTCAGTTTCAGATTTGTGATATGACAATCTGAACATCTTAATGGTATTTTTAT .:.:x..x:..:....-...x.......x.x..------..x.:.::xx....:......xx...:.::x...:x.:x.-xx......-..:.::...........:.........--.:.xx...---....:..x:.x.......x.x:...x....x:x..................:........:.x.:.:..:.......:.xx..x...x..:....:...:x...x......x....x.x:..........-..:.x.:.-------.:x.........:......... 16M1D16M6I40M1D8M1I27M2D8M3I130M1I8M7I22M 203/275 73.8% 293/94230402 0.0% 22/275 8.0% 75925027 NA +40546 chr4 + 190214555 110926578 110926577 110927237 660 TTTGCAGTCTATAAGGAAATTAAGGCAGAAGAAAAAAAATAGAAAAATCTGGATTTAATTTCCCTAACCCATAGTGGATTTC-ACTAAGAAAATAGACCTTAA-TGTAAACAACTTCTGTATTTGTAACGTTTTCTTTTAAAATAATGATTCTGTAAATAACTTATTGTC-CTAAAATGCACAAACTGGATTCCTGAGG-TCTCTGTCATG-GGAGCCTTGT-------------CTCAGGCTCAGCCAAATATAAAGTTCTCCAAACTTTCGGTATTCTTTTGCTCACAACAGCTTTTCAAAAGGTAGATGACTAGGAAATGCACTTTCATTCTCCTC-TTAGTGCTTGAACATTGGTTTGACTTTAATAGGCTGGGATGATTTCAGCTTATAAATCTTCAACTGGAGGATAAAGTTCAAGTAGATAAAATCAAACAGATGTTGGTGGGAGGATTTCTTCATGACCCATAAAAGTGCTATCATCAAAGCTGAGAATCATTTGTTTTGAATTATTACACTGTTATCAAAAGGACTGTAGCAGTCTGTTTGTTGAGGAATTGGATCTGTTTATCTGAAAACAGAACAAAGATGCCATGCTAAGGCGTTCCTGGGAAAGTGTGTTTCAGATGATGGCTGACATGCTGGGGTAGCTCTGAGACACTTTGATTGACATTTGTC chr4 - 94230402 34998817 34998816 34999490 59230913 59230912 59231586 674 TTTACAGTGTACGAGGAAATTAAGAGAGAGGAGGGGGA---GACAAATCTGGAGTGAATTTCCATCACCCATAGAGGTTTTTTGCAAAGAAAACAATCTTTAAATGTAAACAACATCTGTATTTTTCATGTTGTCTTTCTAAATACTGGTTCTGTAAATAACTTGCCCTCACTGTAATGCAACAGTTAGATGCCTTAATCTCTCAGTCATCCGGGGCTTTGTGCAGAATGCAGACTTCCAGCATATTTAAACATACATCTC-CCAAACTTTTGATAT-CTTTTCCTCACGGCAGGATTTCAAAAGGTAGATGACTGTGAAATGCACTTTCATTCTCTGCGTTAGTGCTTTAACATTAGTCTGACTTTAATAGGCTGGGATGATTTCAGCTTATAAATCTTCAACTGGAGGATAAAGTTCAAGTAGATAAAATCAAACAGATGTTGGTGGGAGGATTTCTTCATGACCCATAAAAGTGCTATCATCAAAGCCTAGAATCATTTGTTTTGAATTATTACATTGTTATCAAAAGGACTGTAGCAGTCTGTTTGTTGAGAAATTGGATCTGTTTATCTGAAAACAGAACAAAGATGCCATGCTAAGACGTCCCTGGGAAAGTGTGGGTTAGCTGATGGCTGACACGGTAGGGTAGCTGTGAGAAGGTTTGATTGACAGCTGTC ...:....x..::...........:x...:..:::::.---..x.........x.x.......x.x........x..x...:-:.x.......:.:x.:....-..........x.........x.x.:...x.....:x.....x..:...............:::x..-..:x......xx.::.:...x...x.:x-....x.....x-..:..:....-------------:..x:..x:.x::...:...x.x:..-.........:.:...-.....x.....::...xx...................:x...................:x.-.........x......:..:..................................................................................................................................:x..........................:....................................:..............................................:...:..............xx.:..x............:.x.:........x.....x:x...........x:.... 38M3D41M1I20M1I66M1I28M1I11M1I10M13I26M1D15M1D61M1I339M 556/655 84.9% 674/94230402 0.0% 24/655 3.7% 75927761 NA +3533 chr4 + 190214555 110932360 110932359 110932513 154 TTCTTTCTTTCTTCCTTCCTTCCTCTCTCTCTCTTCTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTCTCTCTCTTTCTTTCTCTTTCTTCTCTTTCTCTT chr4 - 94230402 9693684 9693683 9693829 84536574 84536573 84536719 146 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTC---CCTTTTTTCTTCACTTC-------CTATTTTTGTTATTTTTTTCTTTCCCTT ..:..x.:.....xx.::.......:.xx..:.....x...x.:.:.:....xxx.x...:--..x::xx.:..x..x:x.xx...::.::...::.....---.:..:......:x....-------..x.:...x.:x..:..:......:... 61M2I38M3D17M7D28M 93/144 64.6% 146/94230402 0.0% 12/144 8.3% 101238676 88975879 +3457 chr4 + 190214555 110932398 110932397 110932510 113 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTT-----CTTTCTTTCTTTCTTT---CCTTCTCTCTCTCTTT-----CTTTCTCTTTCTTCTCTTTCT chr4 - 94230402 45185586 45185585 45185711 49044692 49044691 49044817 126 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x..:x:....::....:..xx::.:xx..:.:.x:...x................x..-----.:..::..........---:....:..:....x:.-----...:::x:.x...x....... 60M5I16M3I16M5I21M 78/113 69.0% 126/94230402 0.0% 13/113 11.5% 65746812 NA +10329 chr4 + 190214555 110934026 110934025 110934426 401 TTTTTCTTTTTTACTAGA--ATTCCTTTTACTACACTTGTCATGCTAATATTT----CAACTGTCATATTGAAGTGCTCCATGTCCTATTGGTGACATTATATATTCAAAG---CAATGATTAGACTTAAACATATGAAATTTGAGGACAGAAAAGAACAGTTTC-CAGTTGAATTTTGATTTGCTGAATGGCAACTGATATAAACAAAATATCCTCTCCTTGGCTG-TTGGCAGCCACAGTTCA-CCTGTCAAGAAAGTGCTTATGACCATTTCTC-ATTTTCTAGTGGGAGTGCTGAAAATTTACAACCTCTTTGGGAATTTCA-CTTTTCTTTGTGAAGCTGTAAGGGGAGCCATTATAA--GTACTTTTAATTATAATCTATTTTGAGTGTTGAAAGTTCTTTTCCAGCACAT chr4 - 94230402 35006972 35006971 35007384 59223019 59223018 59223431 413 TTGTTCTGttttatttatttatttatttt-CTCCATACGTCATG---AAATTTGCTATAACTGCTTCATTAAGCTGTCTTGTGTCATGGTAGCAGCTCTGCAAGTTTAAATTGCCTATTTTTGTCCACAAGCATGTGAAACTTGAGGACCAGAAGAACCGGCTCCACAGCTGTATTTCCATGTGCCGAATGGGATCTGACATAAACAAAATGCTTTTCCTTCGGGTGCTTGGCAGCTTTTGGCCAGCCTGTCAGAGAAATGGTTATGACTTTTTCTTTGCTCTCAGATGAGGCTGCTGAAAACTTACAGCCTCTGTGGGAATTTCAGCTTCTTTCCACAAAACAGTAACAGAATCCGTTTTTATGTTATGTTTAATTGCAGACAATTTAGAGTGTTCAGAACTTGCTCCTAGCAGAT ..x....x.....:.x:x--...:x....-..x..:x:......---.x....----:.....::x:...:.:x..:::::....x.:x.:.:::.x:.::.x:..:...x---.x..xx..:xx.x:..:...:.....:........x::..::.x.:.:.:.-...:..x....:x..x...:......x.x....:...........::::.::.:.:..x..-........:x:x.x:..-.......:::..:..x.......:x.....:-::.:..x::..:.:x.........:.....:.....x...........-...:.:.:::::..:.x....x:.:.x..:..x.x.--x..:x.......::.:x.x....x.......x.:.::.:x:.:.:....x.. 18M2I9M1D14M3D6M4I54M3I51M1I61M1I17M1I31M1I48M1I36M2I52M 257/397 64.7% 413/94230402 0.0% 20/397 5.0% 75927054 NA +60091 chr4 + 190214555 110956961 110956960 110960579 3619 GTTTACATTTCAGATATGATATCAGAAACTTGCACTCCTAGTTGTGTAATTTATCAAG-GGTGTCTACAAGTATCTGATAAATCATATTTGGTTGGAGGTAATCTGCTGTAATCGCAATACAGAAATCAAGGGGGAAAATGGTCCCAGCAATGAATTATTCTTTCTTTCATTCTTGTTACCTTGAGTCCACCAGTTTTTCTCAAATCCCCTGATTAAGATCACCTGCCCCCCATTTTGCCCCATTCAAAAATATGTCTTTTAACTAAAAATACAGAAAA-ATATCAAGTAAACAAAATACATCA------ATAAT-----------TTTGGTTCTAGAACTGTAAAAGTTGTTTTTTAAAAATGGTTAAATGGTAGGATTATGAATAAGACACGAATCCACAACTGTC------AATTTCCTGTTGTAAAATGT-----ACAAGAGGGCCAAAGGTTTAGAATATTGCTTATTATTCTA----GCCTTGGAATTCTTAGTAT-------TATAATAAGATTGGTAATGCTTTCCTTTCCTTATTTCAGTGCATAATAAATTT----AATGTTTTC-GAAAGTGAATATTTATTTAGGGATAAAATAAAGACTGTGCTTTATGGTTACAGTTTG--------------CATGCTCC----------TCTGT-------------------AAAGAA--------TATAGTGG---------CTGTCTTCTGTTAGTATAGCT-------AGTTTTAAATTCAAAAAGTC---------TATCAAGTTTTTAAAGAAAATGTTA-----ATATATTACACATGGCATATTGTGTTAAAAAGTCTTTCTATGATATTCAAAATGTTTCAGAAACAATGACAAGGTCA-GTGTTG--CTAGAAAATCAGTGTTTTACTAGAATGCAATGGTTTTAATGGAAATAATAACAACTCACACATTTTAAGGCTTAAAACTGAACTCCTTGATTGTGTTTAGCATATTGGAAGTTACAAGGAGCTCCTATTTTGTAGTTGCTG----TAGATTAGATCGGTAAATGAAAATGTCTTTCTGATTTCCT------------------------AGAAACACTTTGTTTC--------TATTTTTTGTGAACATAGATACTTTGGGGACCCGGCCTTGTTATCTCATGACTGTTTTCCAGGCTGTGTTATCATGATGAATGGGTAATTACAGTACAGGGCACCCACACAGGCCACTGCATATGAGACCCTTCATTTAGGACGTTTTTACTTTATAGAGAGATTCTTTATAAGTTATGAAGCTCTTGGGTTAAATTAAA-------TTTCATTTTGTCATACCTAATGTGTTTATTTTCTC----------------------------------TTGTGA-AGAAAAAGT--CTTCAAACTTCATATGATTTCTTA-AATTCAAAAAACACAAGAAGCACAATTCCAATTTCATGAGAATGTATTATTTCTTAGTATCATACATTCATAGATGATAGACTACTTTAATGTGTGTGTTAGCAGTGCTTTGACTTGTTTAAAAATGCCATCATTTAATAATATGAATTTTTCTTGCTAAGAATAAAAATTGACTACACAATATGATAATATTTGTTTCTGATCCAACACACAAAA---TGAAAGCTTTGCTTATTTATTTGATTAAAATGCAAAAGTGCAAGTACGTTTAGGTTTGTGTTGTATAG-AATAGAACTTATTTTATCAATCACTTTCATAACCTTTAAAGAGCCTTAAATAGTACATATGAAAAACACATTCATATCAGGTTCCCCTTGAGGATTTTTTCTTTGGTTTAAGAAAATTTTATTAAAAATCGGCATTGCAAATAACATTTTTCATAACTATATGTAGACCTGTTAAAATTTTTATTAAAACTGGAGTTCGGCCTGTTCTTTTTCATCATTCTATCAGATATTAAACTCCTGCAGCAGCTGTAGGAAATAGAGAAAGGGATTTTCAAAGGGATTTGAGTCTCCCTGTCTCTGTGCCTTTAGTGATCATATTATCATAACTATCACACATAACAAAGCTCTAAATCTGTAATTCAGATAAAGTAGTCAGGACTCTGAAATACAAAAATCCAAACATATGCCGTAACA-TTTTTTTGCAATGCTGGCTCCTTTAACGTGGATTTTGTAAACTTGGAGAGGTATTCAAGAGCTTTTGTATACGAACACAAACTAAACAACATTGTTAGTGGTATGTTTCACAGAGATTTAATTAGAGGTGTTT----TTATACATCCAAGCAGTTCCATTAAAAG---ACCATGCCTGCATGCTCTAGCAAATTATGATCAAACCTCTAAAGGTTAAAAAG-AATGAAATCAGAAGCTTGTTT---------------------TGAA----GCAAGGTCTACAT-------GAATCTATGTCTAATCCTGCAACA--GTCTGAGTTCTTTCTCAAGAGAGCAACATTCCTT-AAATGCAGTGCTAAGGGTGGTAAGTGTGACCACATAATTTTTTTATGAATT----AAATTAAAAATG-AGGGTAATAAAATTGTAAATGGGCTGAAATCCAACTGAAAA-------TTACACAAGAAAGAGTTACACAATGAGTTT---------------TTTCTTCACATTTACAGGACAAATTTATAACTTAATGTCTACATGAAAAGAATATTTGTGCTGTAAAAAGTTGGTAAAACTCT-AATCAGAATGTCCAACCAGTTTGTAAATGAGCAGCTGTATGTATATATTTATTGTAACAGTGCCTTCTACTGGTCACACATTATCTATGATGTCAGTGAAATTAC-TGAAAAGTAATGAAAACTTGTGTTTATCCTAAATTATTCTTGGGTATT-----TTTATTGCCTTGGCAAAAGTATTTCTGTGAATCACAACTTACATACA-----TAAAAAATATAGTGTGTTAGAGATTAACACATTTGATTTCTGTTGTACTTTAGCAGTAATAGGACCTGTTAAAAAGTTTCTC--CTAAAAAGAAAAGCATTTCCTACATACTGCAACTTAAAATGGGGA----ATATTTCCACCTGTTTATTTTATTGTCTTTCCGATTTTGAAATT------------GATCTTT-TACT--TACCAGCATTTTTCTTTTTAGCTTTTCAGTCACACTG---TGTCTAATTAAAATGAGTAGATTTCTTACATATTATC--------AATATCTATAAAATGTGAGAATCATGA-AATTTATTTGTAACTTGAGAAATGC-AGCAGAATTTGAAATATAACTTAACTAACAAAATATTTAA--CAATATTTAGTGAGAATGATTTAAGGTTTGTC-----TAACTATCTAGGTATAACAAAGATGGTTGATTTTAAATTTGC-------TTAGGAAAAGAATCAAATAATTAAAAAGAGAAGCATGTATAAT----------------CATGAAGA--AAAGCTGC--ATTTTTCAGCAAA-------ATATTG--ACATCAAGTA---------TTTCATTTTCTTA-----ATATATAATAAAGATACCACTGAAATC--TCTTTATGAATCTATATG-ATTTCAGTTTTAATTTTAAATAATATTTAATAAAGTACTTAGATGATTATGAAATAATTGTTT-------TTCAAAAAAAGCATG--TTCCAATTAATTTTATG-----------------------TAGATATGGTTTAC-----ACTGAATGGGCTATCTTGCTGAAATAACATTTTTA-----AGAAATTCTGAACATGAAATTTTTACTATCTGCAATAAAA---------AATCTGTGC--TGTGGAAAAAAT---ATTTTACTTTTGTTT-----AAGTCAATAAATATTGCTTTTATTGCCTGAGGCAACA-TTTTAAAAAACTTTATTATA-TGCAAATTACAACCTGAATATCTGATAAAATTCATTCTATTTAGTTAGAAATAATTACCTCAATCGAGGCAA-TCTGTTTATGTTAGAAATAATGTAAATCAGAAGGAATCCTCAT chr4 - 94230402 35025298 35025297 35029165 59201238 59201237 59205105 3868 GTTTAAATATT-GATTAGATCTCTTAATTTTGCTTTCCTGTTTGTG-AACTTGTCAATTAATTTCCAGAGGGATATGAAAAATAGGTTTTCGACAAAGATAATCCATTATAATCCCAAAACAGAAATCAGAGGACAAAATGGTCACAGCAATAAATTATTCTTTTATACATTCTTGTTACCTTGATTCCTCCAAAATTTTTCAAATCCTTTGCTTAAGGTCACAGGA-----AATATGAACCTTGCCAGAA-----CCTTAAAATAAAGAGGCTGATAATATGTAAAAGAAAAATGGTAGattattttaaataacatttttttatatttGATTATGATAATGGAACATTTATTCTTTGAA-----TT---TAGTAGTCATACTTATAAGAGTGGATTTTTTGACTATCCCCATAAATTGGACGTTCTCAGTTTTTGTTGATTAGA----TAAAGCTTTAAAATATTACAGAAAGTTCAAAGTTGGCTCCGGTCGTTTCACATCAATCTATACAAAAACAT-----ATGCTCTCACAGACAGACG--GATACAGAGCAGCTTCTGCAAAAGTTTTCTGGTAGTCAGAGGTTTTTAAGATGTAGGA----GACTGTACTTCATCAGTATGTTTTGGTGATTTCCACCACCTTGCTCTCTTTCTTAATTCTGTTAATCTCGAGTTAGAAACAAAAGAGAGTTTCTTTATGGGGGGTGGTCATTCTGACTTCTGTAGTTGTTACTGACATGCATTCTTAAAAGAAATAATTTGGCTCAAATCACCATCTGTTTAAAGTCAGTGTTGTATGCAAGTGATACGCTTGA------ATGTTATA------TTCTAAGATGATCATGGAGATGCA-----AATGAGA--GTCATGGGTTGGGCAGGAAGATAAAAGAGTTA--GGAACAGAAGGGTGGTATAGTAAATACAGGCA-CTCATATACT---GGCCTTGAAGACGCAC--ATTAATAATGATGGCAGGACTGGGGATTAAAAGGA---------TTGCAATTACTAGTTTTTCAATATATTTGTAAGTGTGAATGTGTCTTTTTTTTTTTTTTAATGTTGTATTTGCTTTATGAAAGAACAACCTGATTTGCAGTACATGTTTTCTACAAAAAT-TCTGCTTTGAAGGAGAGGCATAAATAACAAGTGAAAACTTC---AGTAGTATTACTGTGAGAAACAAGGATTTA---------------ATACAG-----------TAAGAACACTCACTAAGCACTTATGTAAGTTGCACAGTGTTCACCCA--GGTTGCGAAGTTTGGAAGTGATGTTCTGCTCTGCTTTTAACATTGGCTTTCTCTACATGAGTACTTACTCAAATATGTAAGTATGTAAGCGTACCCCCAGCTGACTGTGGCAGAAAATGTTGCTTGATGAAGCATCTGAGTTTTGACAATTCTGACTGCAAATGGTACTCAAGACCAATG---------------ATTTCTTGGCAT-ATTTGTGCCAGGATGAC------CTTT----TCTTTGCAGGTAATGCAT--------------ATGCTAAAAATTATTACCATTAATTT---------GGGGAAAAGGTT--TTGTGCAAGCTGAAAAAATATGTTTTGGAACAAACAGAAAAAAAACTGAAGGACTTGCTTACTTATTTGATTAAA-TGCAAAAGTGAGACCACGCGTAGGATTTTGTTGTGCTGTGATAGAACTTATTTTACCAGCCACTTTCATAACCTTTAAACAGCCTTAAATAGTACATATGAAAAACACATTCATAACAGATTCCCCACAGGGAATTTT-CTTTGGTTTAAGAAAATTTTATTAAAGATTGGCATTGCAAATAACATTTTTCATAACTATATGTAGACCTGTTAAAATTTTTATTAAAACTGGAGTTCGGCCTGTTCTTTTTCATCATTCTATCAGATATTAAACTCCAGCAGCAGCTGTAGGAAATGGAGAAAGGGATTTTCAAAGGGATTTGAGTCTCCCTGTCTCTGTGCCTTTAGTGATCATATTATCATAACTATCACACATAACAAAGCTCTAAATCTGTAATTCAGATAAAGTAGTCAGGACTTTGAAATACAAAAATCCAAACATATGCTGTAACATTTTTTTTGCAGTCCTGGTTCCTTTAACGTGGATTTTGTAAACTTGAAGAGGTATCCAACAGATTTTGTATACTAACAC-ATTTGAATGACATTACTACTAAAACATTTGACTGAGGCTTAATTAACGGTATGTTCTATTATACCTAC-AGTGATTCCACTAAGAGTGTACCATACAC---TGTTCTC-CAAATGATGTGCAAACCACTAAAGGTTAATAAGAAATGATGTTAGAAGCCtttttttttttttttttttttGTGACTGAATTATGTAAG--CTAAACTGCTGTGGAGGCAATGCCCGTCTTCTCTACAGTGTGTGAGCCCTGGTTCATGAGGACACAGTTCAGCAAAATGCTGTGTTGA-AATGGTAAGTGGGA--ACACAGTTCTCTGATGAACTTAAAAAGCTGAAAATGCAAGGTACTGAAAGT-TGAAGAGGTTAACTTTTTAATTAAGAGCAGTGGGTGCAAAAGAAATGGTTTCTGAAGTATTTTAAAAACTCCTGTACGTTTATTTACGTTGAGAAGATGGTTTTCATATTAAGTGCCTA-GGGAAAACAGTGGTTGTATTGTGAAAAGTTAGGAAAACTCTAAATCTCGGTATCAAACTGGCTTGTAAATGAGCAGTAG--CTTATATATTTATTGTAACACTGCCTTCTGCTGGTCACACCTCATTTATGATGTAAGTGAAAGTGCTTGTATGATAATGGGATGTTCTGTTTGTCTGAAATTGTTCTCAAATATGAGACAGTTGGTGCTTAGG---AAATATTTATATGGA-AATAGCGTACCTCTATCTTGTATAAACTTGTATATATTAAGGACAAACACATGGCACCTATGTTGTATGTTTACAGCTATTAAACTGAT-----ACTTTCTCAGTCGCAGCTGACAGAATTTTTCATGTGTAGC-ATGTAGAAGAGTTATCACATCTTTCCACTTGGTTGTTAAATTG-ATTCTTACTTTGGATATTTCTGCAGAGTCAGATTTTTCTGCTTGTATCTGTGTTTTT-TTTTTGTTTTTTTTTTTCTGCTGGAAGGCTTTGTTCGTCAGAGCATATACCAAGCAAGACATCTGCAGAGAAATTTCTGTTTAATG--------ACGACAGTCTAAATATAAC-----AGAGGCTAGAAGACTTTTAGATCT-ATGTGTTTATGTAGATATTTAAGCAAGTGTTT-----GCATGAACTGCACTTTTTTGTTGGTAAGTGCTTAGTTATTCCTCAGCTGGTC-ATTGAAAATACACACATATATTATGATAATTACTCCTTAGAGGAAAAAGGCAGGATTTAGAACATGTTTTACTCTCTAGAATGTAGAACACAGCTTTTAATTTTTTAAAAAATCTCTTTATAACGCTACTCTAAGGAGACTTTTTTTTCTGTTTTCTTATGTGTGTAAGTGGTAAAAAGTGTAATGTAATTTATATGTATATACCTATCTGTACGCCTGTCAAAATTAAGGAAAATATTTACCACCGTCT---GCTGGCTTTAACATAATAGGTTGAAGAGGTTTGAAACGATTCTGTATTTCATTTGGATGTAAAACCTGAAATTAAAAATCAAATATTAGGTAAGAGTTACCATCAGTTGTAGAGAATATAATGGGTAAAACATGAGTTTACTCAGAGAAAACATTGGCATGCATGTCTGGCTGCCTACAGTGAAATTAATGACTAGATTGTGCAGTGTGGGAAAATTTTCATTTTACTTTGGTTTTCCTGAAGAAGCGAAACCCTGCTTTAGTTGCCTGAGGCTACGTTTTTAAGCACCTTTATTACAGCACAGCTAAAAACTCAGCTATCTGACAAAATGCATTCTGTTTTATTACAGAGGATTACTTCAAAAAGCACAATTCTGTACATTCTTGGGATAATTTAAA-CACCAGCAATCCCTAT .....x..x.:-...xx...x..xx..x:....x:....:x.....-..:..:....x-::.x..:.x.:.x..x...x....x:xx...x.x:::..:.....:::.:.....x...x..........::..:x.........x.......:...........:x.x.................x...x...:xx...:........::..x.....:....xx.x-----.x.x..xx..x.x.x.:..-----.:..x..x....:.x:.x..x..-..:.x..:x...x.x::..x..:.------....:-----------....:..x.::x.x..x..x.x..:..:...:..-----..---.:....xxx..:xx......xxx..x.::x::...:..------....xxx:...x.x.:x.x.-----.:x...----:....x....:......:.xx.xx:...x.----.x..:x.:x:x:..x::..-------..:..x..x..-----.....:..x:xxx.xx.:x--::.:..x.::.:x..:----..x......-.:x...x.:x:x..x..x..:x:..::.----......:...:..x:x..::x....--------------.x.....:----------.....-------------------.....:--------...:.x..---------...x.......x:x.:.x:..-------.x.:.....xxx..x..x.:---------:.:..xx.x.......xx.:....:-----.x:.:x...:.x..:------:.....x.------.....x...:x...x::x.x.x..-----.....x.--....-.x....--.x:...:..x.:x.xx...--:...::x..x...xx..xx.x.....xx::..-....:.:.:.---:.x...:..:x:.x..--x..:..x:..x.x:xx:x.:...:::...x.....---------...:.:..:..:----.xx.x..x..:x....:..x:.....x.:.:.xx...::.------------------------.::....x::..x..:--------.:....:.:::..x..-xx.:.....::.:xxx...x.x:x..x.xx:...xx::..:---:.:x..:...:::...x:..:::.x.x...---------------.:....-----------.:...x.x:...:.x..x..x.x.x..xx..::.x..x.x.:x:::.--:...::....:.:xx::..x.x:..xx:-------...x.:x...x.x.x.::x.::..xx..:..x...----------------------------------:....:-......x..--...x.x:xxx...x...x..:.x.-.....x:.xx:..x.x.:x:.x...xx.....x---------------.......:.:..-..x::.x.xx:.....:------....----.x.x..:x:.:.:...x.--------------....:.xx.x...x..x:..x.....---------:.::x...::..--:.:::...xx...x..x..x.....:x..x.x....x.x....---....:.x:.......:.............-..........x:.x:...:x....x..x......::x.-:...............:..::...................x...................................x...:......x:::...x....-..........................:..:............................................................................................................x..................:..........................................................................................................................:..........................:......-..........:.x....:...........................:........:...x..x..........x.....-.x:.:..::.....::..x.::x.::...x..x...::.......:x...:.x.----......x.x.-..:::.....:...:..---.....:.x:---..:...x-.....x...xx......x...........x...-.....x:.:......:.x...---------------------....----.:...--...x.:-------..:x.x...:.::x::::x.x...--..x....::..xx:...x...::..xx:...xx:-......x...:.:.-::.........x..--...:.:..:.:.x.....:.----..::.:......-.:....x.:...x.-.:..x:..:.:.xx.::x.x.x..:.-------x.:..x......x:...x.xx..xx.x...---------------...x..:..:..x.x.:..:::x...xxx.:.x.:..:...-:x.....x.:.:x....::...:.......:.x........-....xx::.:..x...::.:..............:x.--:x..................x........:..........x.:..:........x.......x.:.-..x.x::.....::.xx..x.....:..:x.....:....::::...x-----x..:x...:.x..---..:.....x.:..:.-x.:.:.x...x.x:.-----..x...x.xxx:.:.:...::..:x.......xxx.::.x.......:x..x:...:x..x::..:x:.-----.x......--:::x.:xx:.x..x....:::.::.::x..-.:x..:..x:.xx.----..x.......:..x..:..xx....-x..::::x...x..x...------------...:...-.:..--..:.x.::.....-.....:x:....:xx.:x::...---x.::.x:..x:xxx...:.x..x:.xx:..x:x:...--------...x...:.xx....--------.:..-.:.:..xx.:....-----.:.x..-..x...x...x.:..x.-.:x.:x:..xxx.:........--x.:.:...-----.x....x:.:x:x...x.:-----...x.:::...x...xx.xx..x....:-...xx....x::.-------...x..x..xx.::xxx..:xx:....::.x..x..x..x..:----------------x...x...--.x....x:--......:.:x...-------...x:.--..x::...x.---------..:::........-----:..x:.::....:.xxx:.x..x...:--.x.x...:x.:....x..-.:x:.x..:xx....xx::.x........x:.xx..x:---.x..::.x.:.x.....x.x..-------..::...x:.x:x..--..:..x..::x.x..x:-----------------------...:..x.:x....-----::..x.x:.:x...xx..xxx...xx.::xx....-----.....x:x.x::....x.xx.:.x:..::..:..:.:...---------.:x:.....--.....:....x.---..........x....-----...xx:xx...:x:......x:...........x..:-......:x.x........:.-::..:x.x.x...::::x.......:.....x......:...x:...x.:.x:.....:....xx::x:...-.....x:..x:.x.::.....x....-..xx..x.....::.. 11M1D34M1D11M1I168M5D19M5D23M1I24M6I5M11I34M5D2M3D38M6I20M5I6M4D30M4I19M7I11M5D19M2D16M4I9M1I28M4D25M14I8M10I5M19I6M8I8M9I21M7I20M9I25M5I15M6D8M6D24M5D7M2D4M1I6M2I19M2D32M1D10M3D16M2D35M9D12M4I40M24I16M8I16M1D41M3D30M15D6M11D47M2D28M7I35M34I6M1I9M2I24M1I33M15D12M1D17M6D4M4D18M14D26M9D12M2D43M3I29M1D38M1I99M1D314M1I78M1D54M4I10M1D17M3I9M3D7M1D33M1I21M21I4M4I5M2D6M7I24M2I34M1I14M1D14M2D20M4I12M1I14M1D26M7I30M15I41M1D41M1I37M2D66M1I48M5I13M3D15M1D15M5I69M5D8M2I30M1D14M4I25M1D18M12I7M1I4M2I13M1D23M3I37M8I15M8D4M1I14M5D6M1I17M1D22M2I8M5D19M5I28M1D13M7I43M16I8M2I8M2I13M7I6M2I10M9I13M5I27M2I18M1I38M3D22M7I15M2I17M23I14M5I35M5I40M9I9M2I12M3I15M5I37M1I20M1I72M1I26M1D16M 2322/3412 68.1% 3868/94230402 0.0% 663/3412 19.4% 75931663 NA +7159 chr4 + 190214555 110961270 110961269 110961415 146 AAAGAGACAATACATGACAGTGGGCAGT-TAATGCACTTTCATTTCCATGAGTTAGGGATAATTGCATAATTCATGAATGGCAGAGAAAAGTCA---CAAGTGTGAATTGCATATGGGCA-----ACTTAATATATGT------CACTACCATGCTAGTTA chr4 - 94230402 35030004 35030003 35030164 59200239 59200238 59200399 161 AGAGAGATAATATGTGGTAGTGGGCAGCATAATTCACTCTCATTTCTCTGAGTTAGTGAGGACTGCATAATTCATGAATGGCAGAGCAAAGTCAAGCCAGGAGTGAGTTGCACATGGACATCACTATTGAATGTGTATATCACATACTGCCCTACTGGTTA .:.....:....::..::.........:-....x....:.......:x........x..x:.:.......................x.......---..:.x....:.....:....:..-----.:.x...:.:.:.------:...:..x.:..:.... 28M1I65M3I23M5I13M6I17M 115/146 78.8% 161/94230402 0.0% 15/146 10.3% 75931266 NA +102336 chr4 + 190214555 110962680 110962679 110964577 1898 TTTTTCCTCCT--ATTAACTGGAACAGACTAATTGCACATTTTGAGGGTGGTTGTTG--GGAGATTCCATAGGCGATATTATAGTCAT----TCATGGGCATCAGGCAGGTATTTAACAGTTTGGTTCAGGTTGTCTAGGACAACAAGAATGTTGTTATGCTGCATCTCCAAGCTGCTGGGATGAAATCAGTTGTGACAAAGCAGTGAAGATTAAATTTGTAACAGATACAACACCTTTGAAATACTAGCTTATGATTTCACAGTGGCATTATAAGTCTTACTGCAGTATTTAAGCAGTTAGAAAGAATGCTGGTTATTAGCAGCTGAAATTTGTAAAATAGGATTTTATTGTCTTT-AAATAGCCATGGCAGCAGTTTGTATTATCCTAGTACAACATTTTTGTTACTATGTATTAGAGTTGGTGA-GTA-TTTTTCATGCTCCTCT-----------------TTTTCCAGGTAAATTCTTTTATCTATCTTTTAAATCCTATGTTAAACAAACATAGAAACGTA----------TACATATGTATTAATATAAACATCTCTATTATGTATTTTAAAATTTAATGCCATTTTGTATGT----------------------------------------------AAAAGACCAAAGGA-AGAAACTTTCTACTTTATTTCTCCCAAATAACATTATAATGATCAGATATC---AAATATTCCAGGCCTCACAGAATACTATGTAC---AAGGCAACTTAAATATATAATACCATAA----AGCTG--AACTATTCTCTTAATA---ATCTTGAAAGGACAGCATTAGCTATACGCAAAGCAATTATGCTCTGTTACTAAATCTGATCACATCTAAATTTCCTGTCTTATCATATGTCAGAAA--GAGCCTGGCTCCTAAAAATAATGTCTAGAAATCTTGAGGTACGTAATAAACTGCTTCTTGATGGGGAATGTGATCTCCACAGATGTAATATGAGGGAAACATCTAAGG---------TTCAGGCATACAAATTTGAATACCAAAATTTTATGTAAGTTACTT---AATATTGAACTTGTGTTATATCACTTTGTTTTAATGACTACGGAGACTTCAATGGGTTAACTTTGGATGAGGGTCAGGTTTTATATGTTTATATTTTCTTAGCCTTGGTCAGGAGAAGTGGCTTTGCTTGCCCTTGTGCAGTGCCGGAGTGGTAGGGTTTCACTCCGTTTGAAAACCTAGCACATCCCAAGAGGTTACCTTGGTGTAGATTTCTTTCTTTCTGTATTAAATCGCTCATTGTCGCAAAGTGACTAGTGCTGCTGGGCTTTGAAAAGAACTTCTAAGAGGTTAAAAAAA----GCTTCTGTATGAAAGGATTTTTTACTTCTGCGGACAGAATACAGTTTGCAGCTGTCTGACTTGCGACAGTGATATGGATCTGATTGTATACAGTATAGCAGGAGCCGTGGATGCAGCTGGAATGGAGGTTATAAATTTTAAAAGCGATGCAGATTTTTGCCATTAATTGGCTGCTAATAAAAGCAAACTCAATGGCTTCTAACTGTGGGAGACTGTGGTTCTGTATCTGATATCAGGAATTCATACACATTACACAGTTTTAGGGATTCAGACCACGACTAATTGAAATACGAGGCATACTGATCAAATTTAGCATTACCAGCATGCACTATGGTTTGGGACTGTATGGCGACAAGGTAGCATTTATTACTTATTCTCCATAACGCTGCTTGATTGAAATATCTAGCTATGTTGTCAGCAGAGGCCCAGCTGGGCTTTAGTACAGCTAATTAAGTCATTAAAAGAGAGGTCAAGCAATCTAACTCTTGCATACTAAAGAACAAAAAAGTCTTTTATTATATTTTTTAATATGTTAAGATTTGAATTTTTAAAGAAATTTCTATTTAATAATAAATGCATTTACTGGTGTATTTATTGAAGTCTTAATTTAAA----TATATAGAAGTAAGAAATTATGAACTTGTCAA chr4 - 94230402 35032006 35032005 35033998 59196405 59196404 59198397 1993 TTTTTTTTCCTTAATTAAGTGGAACAGACGAATTTCAATTTTTCAAGACAGCCATTATTGTAAATCCTGTAAGTAATACTATTGCGATCATTTTGGGGGCATCAGACAGGTATTTAACAGTTTGGTTCATGTTGCCTAGGACAACAAAAATGCTGCTATGCTGCATCTCAAAGCTTCTGGGATGAAATGAGTTGTGACATACCAGTGAAGATTAAATTTGTAACAGATAGAACACCTTTGAAGTACTAGCTTATGATTTCACAGTGGCATTAGGAGTCTTACTGCAGTATTTAAGCAGTTAGAAAGAATGCTGGCTATTAGTGGTTGAATTTTATAAAATAGGATTTTATTGTCTTTTAAATAGCCATGACAGCAGTTTGTATTATCCAAGCACAACATTTTTATTACCGTGTATTACTATTGGAGAAGTGCTTTTTCACACTCCCATGTAGAAAGCTGAGGCACTTAACCAGGTGAATATTTTTTTCTGT-TGTTCACTACCATATCACTGAATTTTAAATGCGGACCttttctttttcttttttttcttttttttctttttctttcttttctttttctttttttttctttttttctgttattttCCTGTTCTTCCCTCTTTCTTTGCTTGGTCAGTGGCTTAGAGAGAGGGGAAAGAACAGAAACATTCA---CTGTTTGTCTCAGATAACACTAGAAT-ATCAGATGTCCAAAAATGTTGTAAGCCT-GTACATTTTTACATATGGTAAATGACTTTTAAAAAATAATAGCATAATTTCAGATGTCAAATATGCCTTTATCATATGGCTTTATGACATGATATTACCAGTACGTAAAGCTACTATGCTTTATGTCTGAATCTGATCACATCAAAATTTCCTGCAGTATCATATAACAGTAATAGAGACTCATTCCAAAGAATAACGTCTAGAAATCTTCAAGTATTCATTAAGT--CATCTGGGAGGAAAA------------AGGCGTGA---GCAGTAATCTCGTAAGGATTGCTGTACTCTGTATTACAATTTCCAGTGTTACTAATTTGTGAGAGATGGTTTAAAATATTAATCTC-TGTATTGGCGGGATCTTTTAATGACTCTCTAGACTTCAACGGGTTAATTTTCAACGAGGGTCGGGTTTTATATGTTTATATTTTCTTAGCCTTGGTCAGGAGAAATGGCTTTGCTTGCCCTTGTGCTGTGCCAAAGTGATAGGGTTTCATTC-GTTTGAAAACCTAGCACATCCCAAGAGGTTACCTTGGTGTAGATTTCTTTCTTTCTGTATTAAATCGCTCATTGTCGCAAAGTGACTAGTGCTGCTGGGCTTTGAAAAGAACTTCTAAGAGGTTAAAAAAAAAAAGCTTCTGTATGGAAGGATTTTTCAGTTCTGCAGACAGAATACAGTTTGCAGCTGTTTGACTTGCGACAGTGATATGGATCTGATTGTATACAGTATACTAGGAGCCATGGATGCAGCTGGAATAGAGGTTATAAATTTTAAAAGCAATGCAGATTTTGGCCATTAATTGGCTGCTAATAAAAGCAAACTCAATGGGTTCTAACTGTGGGAGCCTGTAGCTCTGTATCTGATATCAGGAATTCATACACATTACACAGTTTTAGTGATTCAGACCACGACTAATTGAAATATGAGGCATACTGATCAAATTTAGCATTACCAGCATGCACTCTGGTTTGGGACTGTATGGCGACAAGGTAGCATTTATTACTTATTCTCCATAACACTGCCTGATTGAAATATCTAGCTATGTTGTCAGCAGAGGCCCAGCTGGGCTTTAGTACAGCTAATTAAGTCATTAAAAGAGAGGTCAAGCAATCTAACTCTTGCATACTAAACTACATAAAAGTC-TTTATTATATTTTTTAATAAGCTAAGATTTGAATTTTTAAACAAGTTTGT-TTTAATAATAAATGCATTTGTGGGCTGCTTTGTCTGGGGCTTGATTAAAAGAGGCATTTGTTAGCAACAAAGGGCGAACTTTTTGA .....::....--.....x..........x....x..xx....x.:.:::.:::..:--.x.:..:.::..:.::...:...x.:x..----.::x.........:.......................x....:............:....:..:.............x.....x............x..........x.x...........................x............:.............................x:........................................:......::.:....x...:.......................-...........:..................x..:...........:....::.......xx:....x..-..:-.......::....:x.-----------------..xx......:...x:....x...:.-.x..x.x.x.:..:.:.xxx..x:x..:.x:..x.----------.x.x.x.x.x.:xx.x.xxx.x.:.::x..x.x.x:...xxxx...xx.x:.x....x.x...----------------------------------------------:.:..:xx....:.-......x...x---:.:...x..:..:......:..x...-.......:..---....:..x:.:....-::.x.x.x:..::..:---..:xx.x:..x..x.x......x.....----..x..--..x...x.::...x:.---:x...x.x::x.::::....x.x:....:.....x.:......:.:.xx..:..............x..........:xx........:x...x..--...x..x::...x..:.....:.............x.:...:x:.x...::--.x...x.:x..::..------------..::..:.---.x:.x..x.x:x.....---------:..x.xxx.....x..:x.:.:::.xx.x...:..x:..x.:x..---......:.x..:-...xx.:x.:xxx.x...........x:xx.........:.......:...x:.:.......:.........................................:.....................x.....::....:..........:..-...................................................................................................................................----...........:..........:.x......:.......................:.........................................x:.......:................:.....................:...........x.....................................x...............x....:.:............................................x..........................:.......................................x.....................................................:....:...........................................................................................................xx...x.......-...................x.:...................x..:...x.-...................::x..:xxx...:.:x::.x...:...x...----:..x.:xx..:..x...xx::......x.::. 11M2I44M2I29M4I265M1I69M1I3M1I16M17I26M1D35M10I63M46I14M1I11M3D26M1D10M3I15M1D16M3I28M4I5M2I16M3I96M2I51M2D15M12D8M3D17M9I45M3I12M1D152M1D131M4I510M1D50M1D50M4I32M 1537/1871 82.1% 1993/94230402 0.0% 149/1871 8.0% 75930674 NA +3305 chr4 + 190214555 110969271 110969270 110969353 83 CTATAATCTCAAACTCCTGAACTCAAGCGATCCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTGTGGGAAAGTGCCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ...:.::.:x..:..:...:::.....:.x.:.x.xx.x........:............:...:::x.--x.::........ 69M2D12M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 92772145 NA +16800 chr4 + 190214555 110987625 110987624 110988065 441 CTCCCGGACCTTTGGTAATCTTATGCATAAACTTTGAGGAAGTCAAATATCACAGGG-AGTATCTAAAATTTTTGTCTGAAGGTCTTTTTGTTCTTAACTGTCAGAGAATATAAAAAA--------------TCAGCTGTGGTATTTTCAGAACTATCCAATTTCAAATGCCCTTTTATTCAGTGCTTTTATGACCAGTTGCTTGACAACATATAGATATAGTTACTTCATGTG---AGTGTTCCTGTGCTGTTGGCGTTAG--TGTATTTTTCTGGACATATGCTGTTGTACAGTAGTTCCCGACTTATAGA---TTCTAAACTGGCTCTAGTGCTTTGCATTGTTACAGATTTA---GAAACTTTTGTAACTGAAAAATATTTCTCCACACATGCTTTTGGAA----ACATATTTTGAGACAAATATTAGTTACTAGATATATAATGTGTGCTGGGTGTGCTTTAATAG chr4 - 94230402 35040437 35040436 35040891 59189512 59189511 59189966 455 CTGTCAGATATTTAGCAATATTTTACATTACATTTT-GGAAGTCAAACACCGTGGTGTAGAGTCTGAATTCTTTGTCTGAAAGTCTTTTTGTTCTTAACTGTCAGAGAATATaaaaaaaaaaaaaaaaaaaaTCAGCTGTGGTATTTTCAGTCGTCTCATATTTCAAATGCCTTTTTATTCAGTGCTTTTATGACCAGTTGCTTGACAACATATAGATATAGTTACTTCATGTGAACAATGCCCCCGTGCAATTGGTGTTGGTATGTATTTTTCGGGGCATGTGTCGATATACAGTAGTTCCCAGCTGAGGGAGTTTCTTAAAAGGGCTTTGCTGTAGCGCATTTTTTTGTGGTGAAGTGATGTTTTTGT-----TGAAATGCTTCCATA-ACATCCTCTCTGGGTTGCATCTATTTTAAGATACAAGTT--TTATTA---ATCTGAAGTATGCTGG----ACTCTAGTAG ..x:.:..:x...:.:...x..x.:...x.xx...x-..........:.:.:::.x.-..x:...:..x.:..........:....................................--------------...................xxx.x..xx............:.............................................................---.:..::..:....x:....:...:.--..........x..:...:..::.x.:.............::..x.x:..---.::....xx....:.:x..:xx:.....x..x::x:x.x.---..x::......-----x:....::...:x:.-....x..:.:x.::----.:x......:...:.x.x:..--...:..---..x.:.x..:......----:..:..:... 36M1D20M1I60M14I102M3I25M2I49M3I40M3I11M5D15M1D14M4I21M2D6M3D16M4D10M 322/425 75.8% 455/94230402 0.0% 46/425 10.8% 75947188 NA +15904 chr4 + 190214555 110988517 110988516 110989143 627 TGTATTTTGTTTATTATGTGGTCTTAGTTATTATAGGAGAGAGAATA---GGTTAATAATATAATAGATCAAGAAGAGTAGCATAGGATTAATTCAACACAAACATTCATGTAAATGACTGA-ATTTAAAATAACCACTTACTAGATCTACGTTTAG--CAAATACCTGAAAGGCAAAAGTTTAGACTGTTAACT------TTGTGGAGATAGTGGCTCTGAAGACAGTTTCAGGTTAAAGTAGTTGTATGTTTGAACTAAAAACAATGTGCATAGGAGTCCTATGCA------ATTCTAGGGGATTATT--ATTTCCTTTTAAGAA----AAACACCGCCCTGTGGATCACCACGTC-CAGATTTGTACAAAGAAAAAC------TAGTTCAGGGCTGAGACTGAGAGCTGATACATTT-CAAGGAGGACTGGGCAGCTGCACTTGTGAGCGGTGACAGATCTCTGTGAAATATAATCCTGATTAAAAATGCATGTGTGAAACCTCTTCGAATAAAGCTCTGTGTCCAACAGCATTTTCAGAGCTCCTGCATGTAAGAAGGGAAGACTAATGTAGCTACTCTTGTACTATTCA------CTCCATCATTTGCTGGCTGTTTTACATTTCTGAAATTATCTCTTACTGTAACATTGAAGTAGGCA chr4 - 94230402 35041887 35041886 35042503 59187900 59187899 59188516 617 TGCCTCTTGTCTGTTCCGTGGGGGAAATTGTTATGGGAGTAAGAATATACAGTACAGAAT-TGGTAGGCTCAGTAAAACAGTGTAGCTT-------ACAGAAGAGTTC-------TGGCTTACAGTCGAGATAACCCATCAC---ATTTTTATTTAGAGTGCATAATTTAAGGTCA---GTTATTAATATTAGCTGCATGGTCGTAAAGATAATCTCAGTAAAAAAAGTACTGTACTAAGGGAGTTGCAC---------------------------AGCCCTTTTCAGTGTCGATCCCAAGCAGTTGTTTTGTTTTGTTTTAAATACATCAAAAATAGTCCTGTGGGTCACCAAGCAGTAGATTTGTACAAAGAAAAAAAAAAAACAGTTGACAGCAAACACAGAGAGCTGATATGTTTTCAAGAGGGAATAGCCTGCTGCACTTGTGAGCGATGATAGATGTGTGTGAAATATAATCCTGATTAAAAATGCATGTGTGAAACCCCTTTGAATGAAGTGCTCTGTCTGACAACATGTTCAGAGCTCCTTTATGTAAGAAGGGAAGGGTAATGTAACATCTCTTGTACCGTTCACTTTCTCTTCATCACTTGCTGAACTCATTGTTCTTCCAAAATTTTCAGCAAATGTCACCTACAAGCATGTA ..:x.:....:.:..x:....xxxx.:..:....:....x:......---:..xx.x...-.::...:::x..x.:.::..::...xx.-------...x..:x:...-------..:..x.-.x.::.:......xx.:..---..:.x::.....--::x...x:.x..:.x..---...xxx.x.:...:..------.:..::.....:.xx.xx.:..:.x...x:::x::...:.x.....:.:---------------------------..:...x.x..------..:.:.:.x::..:..--:...:x......:x.----...x.:x.:.......:......x.:x-:...................x------:....x.x:..x:.x..x...........::...-....::...x.:.x.x................:...:....x.x........................................:...:....:...:x..x....::...:...x............x:...............:x.......:.xx.........::....------..:.....:......:x:x:x..::x:...::.....x..xx:x.x...x..x.xx...:.x.:. 47M3I10M1D28M7D12M7D7M1I19M3D12M2I17M3D16M6I49M27D11M6I16M2I15M4I27M1I21M6I34M1I173M6I65M 401/579 69.3% 617/94230402 0.0% 86/579 14.9% 75946630 NA +3135 chr4 + 190214555 110989825 110989824 110989915 91 AGTTGTATAATTGTTATATATATGTATATATATATATATATATACATATATATATATATATACACACAGATATAAACATAGATAAATGCAC chr4 - 94230402 88029570 88029569 88029656 6200747 6200746 6200833 87 AGTTGTG-GACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAAT---AGCATTAAAAAATTCAC ......:-:.:x.:.....x.....:.:x.x...:.:.x.:.......x...:.:......:....x.:..---.:...x:.x....x... 7M1D63M3D17M 62/87 71.3% 87/94230402 0.0% 4/87 4.6% 22960255 NA +188323 chr4 + 190214555 110990804 110990803 110996000 5197 TTTTAATTAGA-GTATTAAAATGGGTACTCTCTGAGGGACAAATAGTGGTGTTTATTATCTCTAAATTTGAGATTTCAACTT-----------ATTATGCCTTAAATTT---------TGTCTTCCCTAATA-----TTTGTGTATATTTT-CAATAATATCTATTCTTCCTTATAGGAGAATTAATCCTATAAAAAGATTCCTTTATAATGTAGATGCATAAAGAGCAATACTTATTATATATTGTCATTTTCCTAAAAGTAA-----TAATTTTTGAAAAGTATA-----------TTATATATAGTTTAATGACAATAT-ATAGAACATAAGATAGTGGATGAATTTCTACCACAAAATATGTTGCAGGTACAAACCAATGAATAAAAATTACTGTCACTGAACAACAACAACCAAAAGCTTTCTAAAATATTTAAGACCTTGGATATTTTTTTCTAATCCCTTGGTGCCTTTTAACAAGTGAAACTATTTTTT---TTAAATAAGATTGTCAATGGCTGTTTTTTCAGATTTATTGGGGGCCCCATTTAGCTAGAGTAACTGTCTTTTGTGTTTTAACTGTATAAAAAG-----CTTTCTCATGTA-------------TTATTTTCCTAGTACACATGTTCACACATGAAAATGCATGCAGAGAAGTTCGCCAAAGTGAAAG----GCTGATCACCTTCATGTAAAATGTGATCCTTTATGTCTGGTGCAAATATCAAATGAATAAAGCGTACATGCATTTTTCTTTGCTGATATCCTCTTACTAATGAATGCTTAGA---TAGTAGAAGTGAAATGTAATTTATCTTCGTCATTGTGTATATTTTACTTTATTTGCAATTAATTCTCTTGCTATATTACATCTATGTTAATATATGTTTTCTTACAAATTCTAAGGAGAGTACTGACTTTAATTTATTTCCCATCTTGCAGTTAATTTAAGCAGGGGTTTAATACCAGTGATCTCCTTTCTTAGTAACAAATACACATAGTGAGTGTTCTGAGATTAGTGTATGAACCCAGAATTCAGAAATGGGTTTTTATTATTCCTTTTGATTTAAAATAAATTACCAATTATTAGCTTAAAAATTCACATTGAGAATTAGTAGTCTCAGATTGCTATTTAATTCATTCCTGTTATTTTAAACTTTAAATTACTGATATTAATATTAGCGTTTTTGAGCAACATTTCTAGGGTAAACAGGTTCTCTAATATTCATAGTCTGAAATCACTGTGTGT-ATATATATGTATGTG---------AAGAATTAAAAAAAATTTATGTGGAAAATTAAAATCTA-----AATATTTATAAAAATATTTGTTTT--TCATGA--------TGTTACTTCCAGAGTTCTATAAAGACAGTTACATGAATTTTTGTGTATATTAAAATAGTGACTTTTAATTACAGTTTCACAAATAAA-----AATTAATAAGATAAAAATCACTCAATAGATTC-----------ACTGACAAGAATTG-TCATTG-AATGTTATTAGACATCTAACATTTGACATGTCAATTGTCATCCCCTTGAAAAAGATAATTTGTAAAACAAGTCTGTTTAGGAAACAGAAAAGAAAAAAACTGTAACTTTTAAACCAATTCTAGCTCAATAGGAATAAAATCTATTATGATTATAAAACAGTCACAGTGCTGGAAGGGAGACAGAAGAGGTAAAGAGAAGTAAAAATGTTTCGAACATTGAAAAATCCTTTATTTTAGTGCTTATAATCATATGTAGAGTGCTTCATTTTG-AAGTGCAATTT------AAAATACTAACTGTTGTGACAACTTGGGGTGAAA---------------------------GTTCCTTCTGTATTTT------ATACCTGGA-CAGAGGATAC-ATGGGCCCGTCCTAGCTATAGTTTTTATTACAGGTCTTCCCAAGAAAGAGTTTGG--------AGTTTCCTTTT-TAAATCCTCATCCAGTG--ATGTTTTACTT--------ATCATAC--AGTACAATATCATATGG-TGTCTTCAGCAAACAGAA----------TGTAAAAAATTCAAGA-AGCCCTA--CATGTAAGAA-TGTGAAT-------GTTGACCCTTATTTCTGACTGACCTTGCTGATATACCTTCCATATAAAGTAGCTATGGGCCTTGCAAGGCTTCTAGTGACTGTTATTTGAATAATAAATGTAGAATCTAGAGAAATATGTTTTTTCTTAGCATTAACACACAGGTACAGCAAATGGTAACACGCCAACTGGCCCAGAGTCCTTAGTTAAATCATCAGTTTGTTAACTGCTGTTTGCAGGGTAAACCCTCCCTCTGGAATGAACTTCTTTAAAGCAAAATGAAATAAAATAAAGGTAAGTAAAAGTAAATAGATTTTCCTATTGAAAGTTATTACTTCAGGAATGAAGAAGATGGATATTGATCGGCACCATCCTTTGCCATTACTGTCAGGTCCACGCAGATAGCTAAGACACTTTATTCTAAGCAAACAGCCATTTTCTCTTCTGACATGGGATTCCAGTGAGAATTGAAAAAAGTAAAAGGTTGGTAAAAACATTTTTCTGTCCTTCTTACAGGGACAATTTATGTTGAAGTAACAGTTTGTGAGGTACTTGCACTTGTTATTGATTTATTTCTTCTTTGTCATGAACAATCTCCTGTTTTATAATACAGTTACTCTTGTATACTGTTCCTAGGCAGTAATTTAGAAATAATTTTCATTGCAACAATGTCCTGAGGGGCT-CAAAATATTGGAAGTAT-ATGAATAAAAGAATAAACATGTGTAAACCTTTTCTAGGTGTTA---TCTAGGTGTTTTTAG---TACATTGATATTTGCAATATTTGTTTTTAGCACTAATAAAAGACACAATATCATGATGAGCTATTGTCATAACATCGCAAATGGAATTCTAAATCCATGAAGTCCCCATGGCTTTTGGTCAAATAAACCCTCCAATATGACCTTGGGAATCCATGGACTGGAAAACAG-------AAAAGAGTGTGAATAACATAATCTTAGCGTACTCAGGTTATAATTTATTACTATCAGAGACTGGCTAAGTCTCTGTTGATAAGAAAGCAATTCTGAGTGAAAAATCT--------AGTAAACCTGAAGAAAAACTGTTGTTTAAATCAATAAATATCTTTGAGATATGCACCTATAAATTTTCCCACTAGTGCATGTATAAACATCCACTTTACTCTCTGTGTTCACCTATACAGTATACAATTGTTTCCTCCAAAAAAAAATCAATATGGCTGTGATTCCGCTATAGTTCATTCACTGTTT-ATGGATAGGGATTAATGTTTGACCTCTCCTTGCCTTCTTGACTTGAACCAATTACTTTAGAATAATTTTTCTGGTTTAACTTTTTATCACGTTTTCTGACATTTTAGTGAATAATATTTGACAGCTATGAACATCTGCAAAAGTTATTGTTATCATAACTTGAGCTCAATGGAACTACTGTCACTGATGCTCT--AAAGATCATATTGCACTGCAGAGTATGAACACACTTACATTAAAAATTTATT-----------TGATTTTTCAGTAGGAATCTTTGCTTAGTTTGCTTT------AACAAAGGCAGAC-TGTTTCAAATTTTTTTTTGAAAATGTTACCTGAA-----------GGTGGGAAGTGAATTTGCATTCTGTACAGG-----GGAAGTCTCAAAGTCTCTATTTTTCATTCTGGAATTTTATATGTTACTGTTATGCAGGAAACA----GCTTTTAATCTTCTCTATCTCTGTCTACTTTTTCTTA------------------------------------------AATGAATAAAACAAAAATCT----TTGGAACATGAACACTGAAACCCAGCTTTGTGCATCATAGGTTTGTGAGTAATTTCTGATAAAAGTATTTCATTTTAGTGTCCTGATTTCTTATTCAGTTTGCACTCAGGGAAACTGGTATATTGCATTCTCCTTGAAGAAAGCCATAGAGAGAGAAAATGCAGTTAGTCATTTATGTGCATATAACAATATAAATTGTAAAGATTAAGGGGAATCATTTTGGGGAGGATCACAATTTTGCAACTAAACGCACTTAAATAATTACCTTTTTAAGCAACTTTTATTGACTATGCAGCAGGATAAAAAGTAATCTTACTTGTTTTAAATGGCATAAAGCAACCAAATGCCATTAGCAGAGTGTTACATTTCTTATTTCACTAAGATTGTTGAAGCTTACCAGAAAGAGATAAAAAATGTATAAATTCAGGAACACTGGCTAGTAATATCCCAAACCATTGTCAGTGGACTCCTACTTTCTCCTGCCAAAATATGTGGAAGCATGCATGGATTGTACTAGATTAGTAAGAGGGGCTCGTTTCCGTGGCATTAGCCAGGTATCTTAGCAACAAGACCATACCAGATTCTAGCAGTGCTCTGTGGTGGTGCATGTAATATCCTGGACATAATCTGTCTTTTAATTTTCTTTGGATTGTAGTGATATTACAGATACATGTGTTCAGTTATAGATCTTTATTTAATAAGAAGAATGCCTTAGCTGAAGATTTGTACTATGCCAGGAGTGGGCAACTCACAATAATGTTGCTGGCGTTTTAGCCGAGGTACTGCCTTGTCTCGCATTTCAGATTGACAGGAAAACTTACTCCCTTCATTAAGATGTGCCTCATAGTTCATATCTTTATGCTGTGGAGATGAGGATGCTGCTGGAATTCATAATACTAAGAACGTTATTTAATGTCAGATAGAATGCAAATTGCTCGTACAATTGAAATGTCATCTAAAACATGCCACCGTATGCAACACCACTTTATTATAAGTCACTGAGAGCAATATCTTAAATTTGGAATTGCACTAATCCTTCATCTGC-TTTGTTTACCTTTCATCTATAATAGAGATGTCGAATTTCCTCCAAACTGGATTTGCATGTTTTAACTGCTTGCTCACATAGCTGAATATGTGTGGAAGAACCATATAGGGGTACTTCC-TTTGATTTTCTTGTCTTTTTGTTGTTTGTTTAATGCAAATTAACAGCAAAAGATAGCTTTCAAATATGAGACAAAATGCCGTGTCAACCCTTTTGGGGAAATAAGCTAAAGCTTATGAAGGAACATTTGATTATTTAAAGGACAAATTATAATACAAAT---ATGCTGTCGGTTTATTGGTAATTGATTTTCTTGGTAATTTAGTTTCATGCAGTATTTTCTTGCAT-TAATTGA------AACAATAATTTTATAAGATTAATTTTTTTCACAGTGAAATTACATGTGAGCTATTTAAGACATTTGTCATGC-TTGCTTGGAGAAAG-TGTCCAGAACAATTGCCATCCAAAATAAAGCTATCTTGACATAAAAAATGTTGTTTGTATGCAAGCGTTCT-TACCTTGAGTTCTAAATATTCATTCAAGA chr4 - 94230402 35044926 35044925 35050142 59180261 59180260 59185477 5217 TTTTAATTTGACATTTTAAGAGCTGTGTTGGGTAGAGGATAATTAATAGCACTTACTTGCTTTGAAGTTGAGCTTTAAATTATATATAGCATAATTATGTCTAAAGCTCCTAACTTACTGCTTACCCTAGTAGGTATTTCATCTGTGTTTTACTGTAACACAGCTTCCTCTGTACAGCAGCTCTCATCCTTTTCCTGGGCTACTTAACCTT--------------AGAAATATTGACCACATATTGTGATTTTCCTGCAATCACCTAATTAATTCCTGATGCTTCTACCTTGTTTCAATTATTCTGACTTTCAGTTCAATATTATGAGAAATAAAATGGTGGATGAAATTTCATAACAAAATTTGTTGCAGGTAAAAACCAATGAATAAAAATTACTGTCA--GGAC--CCAAAACCAACAACCTTCTAAAACCTTTAAGACCCTGAATGTTTTTT-CTAATCCCTGGGTGCCTTTTAACAACTGAAACtattttttattttttataaaattGTCAATGGCT-TTTCTTTAGATTTATTGGGC-TTCTGTTTAGCTTCAATAGTTGTCTTTTGTGTTCTACTGATACATGCAGTGATACTTCACCATGTGGTTGTGTTTTTTTTTTTTTTTCTGTTATCC-TGATAACAGA-GAGAAT----------AAAAACGTTGAAATGAAGACCCTGTGTATAACCTACACAGAAAATTGTAGAATTAAGGGTTCATTTATTCACCACACACACA---CACTCACGCA---------------ACCTGCTTTCCAATAAATATGCAGACATTAATGACAATGAAATCTTACTTATCCTTAGTATTCTCCAAATTTTACTTT----GAAATTAATTGTCTTATCAGGTTACATTTATATTAGTATATGTTTCCCCTCAGATTCTAAAGAGGGTAGAGTCTCTAATTTATTTCCCATCTTGCAGTTGATATAAGCAGGGTTTTAATGCTGGTGATCTC-TTTCTTAGTTACAAATACACACTCTGAGTGCTCTGAGATTTATGTAAGAACCTGGAATTCAGGCATGGGGTTTTACACTGCTGCTTCAGTTAAGATTAATTAGCAATTATTATTAATAAAATTCGCAGTGCGAATAA--AGT-----GTTGTCTTTCTATTCTCTCTTGTAGTCT----CTTTTATTTG--GGCTTCAATATTGACACGGCTGTGAA-------TAGTG---AGGGGTGTTGTTGCTACCAAAGTCATGAA--AATGTGTGTTACAGAAAAGCAGATGGTTACTTGTAAATATTAAGAAA-------GGGGTAAATTGCAGTCTAGTTTTAATTTTATTGTAGGTAATTGTAGCAGTAGGGAGGGAAAATTGGTGACTGCAGA-------AAACACAATTGTAC------TTTAATATATTTAATTTGTAA---TGAGCTTCAGTTTTTCCACTGAATTCCAAATGAGTAAG-------CCGTTCACTGTGGTCTAGCTAATACAACTGGAAAACAGTGATTATTGCAAAGGTGTTATGC------TGTCTGATGCG-CAGTTTTAGCGC-----------ATAATT---AAAATAAAACGCTCTAATAGAAAATATTAGATGATACTATAAGTGCT--------TCCA------------TGAAGTTTTTTATTACTTCTGAA-AGCCA----GTTGGAGGGCACAGAGAAAA---CAAAATAAATATAC-TGTTTTGATAGATGTGAACTATGTAACATTAGTGGTTATA-TCAACTGTA---TGATTTACCTTGTGAATGCAAATTTCTTGAAAGAGGGTACATG------CAAGT--GGATAATATGTATGTTTTACTCTCCTTCTCCTCTTGTTCCATTTGCTTTTCTTGAAAATACATGGATCTAAGAATATGATGGGATCAACCC--------TTGTGATTTAAGGGC-----AAAAATCAGTTTAATGCCTGACAGTTGCCTGCGGCAAACTGTTGCGTGGTACCATGACTACCTTTGGCAGTCATCAGCCCTGGTATGAGGCTGCGTGGGTGTTTGTGACACAAGGAGCCCTGGATGCTGTAGAGAACCTGGGCCAGCTCTGGGCACATGAGAAGTGAGGATTAGATAAATTACCCTTTGGTTCTGATTGACCTTTCCAGTGTGTGCTATACGTTGGG-AATTGTATGTGCTAAATGTCTTGTAGTACTCATTGtttatataataaataaattttCCAAGTAGATGTGTTTCTCCTTAACCCTAACCAATGGCTACAGGGAATGGTAACATGCCTACTGGCCTATAGTCCTTAGTTAAATCATCAGTTTGTTAACTGGTGTTTGCAATCTAAACCCTCCCTCTGGAATGGACTTCTTtaaagcaaaatgaaataaaataaaggtaagtaaaagtaaatagaTTTTCCTATTGAAAGTTATTACTTCAGGAATGAAGAAGATGGATATTGATCTGCACCATCCTTTGCCATTACAGTCAGGTTCACATAGATAGCTCAGACACTTTATTCTAAGCAAACAGCCATTTTCTCTTCTGAC-TTGGATTCCAGTGAGAATTGAAAAAAGTAAAAGGTTTGTAAAAACATTTTTCTGTCCTTCTTACAGGGACAATTTATGTTGAAGTAACAGTTTCTGAGATACTTGCACCTGTTATTGATTTATTTCTTCATTGTCATGAACAATCTCCTGTTTTATAATACAGTTACCCTTGTATGCTACCCTAAGGTAGTTATTCAGAAATAGTTTT-ACTACAATAAAGTCCCAGGGGACTTCAAAAGATAAAAAGCATTCTGAATAAAGATGCAGACG---------CTTCTTCATATGTTGGGTTTTGCGTCTTATGTGGCCTATATTGATGAGAGTAAGGTACGTTTACAACAACAATGAGGGGTACAGTAT---GGAAAGCAACTGTCATAACCCTGTAAATGATGTTGGGTGTCCATGGGGCCCC---------TTGCCAGAGAAGTCTCAGAAAATGACCTTGAAAGTCCATGGAGTGAAAAACAATTAAAAAAAAGAAAAGTGAATAAAATGAC----ACTTTCTAGGGCC---------TCTTATCTGTGA-TGCATATGTTGCTCTAAAAAAAAAAA--------AGCGTTGAATCTGCACTGTGAATGAGTTGGAAGAAAAAGTAATGTGGAAAT-----------------ACATGTGTCTTTCACTTCT-----TTGTGTACATGTAGACATGCA--------------TACACATGCACAAT---TGGTTATTTGCTTTAGTA------TAATATTTCCATTATTCCTCTACA----ACTCACTGTTTTATAGTTAGAGATTAATGCATGACCTCT----GCCTTCCTGACTTCAACTGATTACGGCGGAGGAATTCTTCTGTTTTTACTTTTTATCACATCTTCTGACATTTTAGTGAATAATCTTTGACAGCTACGAACATCTGCAAAAGTTACTGTTATCATAACTTGAGCTCAACAGAGCTACTGTCACTGATGCTTGGGAGAGATCACGTTGCAGAAAAGATGGGCAGTGAAATTACATTCTTTTTTTTTTATTATTCTTGGTGAATTTATAGTAGGAATATTTTATTACTGCACTTCTTCATCAGCAAAGACAAAAGTCTTTCATATTT------AAAAATGTTAGCTGTAACATTTATATTGCTTGGCCATAAGCCTGCAGTCTAGTCTGGCTGTTTGAGGACGCA--GTTTCC---TTCCATGTAGGATTTTTACATGC----ATCATAGAACGAGCATTCCATTTCTTAGTTTCTCTATTT---TCCATTTTTTCCTTTTTTCTTTCTTAGTTGTTGTTGTTGTTACCCTGCCCTTTTATAATCTATTGGGCAAAGAGCTACTGCTGGGC--TTAGAGCCAAAAAGCAGTTTTAAATAGCACAGACTTTTGAGTTATTTGTGTTAAAATTATTCCACCTTATTCTTCCTCTTGCTTATTCAGTATGCGTCCACGGAAACTGTTACATTACATTCTCCTTGAAGATGGCAATGGAGATAGCAAATGCAGTTCATCATTTATGTGCATATTACAGTACAAATCACAAAGATTAAGGGCAGTCATTTTTGGGAGCACCACAATTTTGCAACCAAAAGCACTTAAATAATTACCTTTTTAAGCAACTTTTATTGACTATGCAGGAGGATAAAAAGTAATCTTACTTGTTTTAAATGGCATAAAGCACCCAAATGCCATTAACAGAGTGTTACATTTCTTATTTCGCTAAGATTGCTGAAGCTTACCAGCCAGCGATAAAAAATGTATGAATTCAGGAGTGCTGGCTAGCAATATCCCAAGCCATTGTCAGTGGACTCCTACTTTCCCCTGCCAAAATATGTGGAAGCATGCATGGATTGTGCTAGATTAGTACGGAGGGCTTGTTTCCGTGGCATTAGCCAGGTATCTTAGCAACAGGATCATACCAGATTCTCGCAGTGCTCTGTGGTGGTGCATGTAATATCCTGGACATAATCTGTCTTTTAATTTTCTTTGGATTGTAGTGATATTACAGATACATGTGTTCAGTTATAGATCTTTATTTAATAAGAAGAATGCTTTAGCTGAAGATTTGTACTATGTCAGAAGTGGGCAACTCACAATAATGTTACTGGAGGTTTAGCCCAGGTACAGCCTTGTCTTGCATTTCAGATTGACAGGAAAACTTACTCCCTTCATTAAGATGTGCCTCGTAGTTCATATCTTTATGCTGTGGAGACGGAGATGCTGCCAGAATTCATAATAACGAGAACGTTATTTAATGTCAGATAGAATGCAAATTGCTTGTACAATTGAAATGTCATCTAAAACATGCCACCGTATGCAACACCACTTTATTATAAGTCACTGAGAGCAATATCTTAAATTTGGAATTGCACTAATCCTTCATCTGCTTTTGTTTACCTTTCATCTATAATAGAGATGTCGAATTTCCTCCAAACTGCATTTGCATGTTTTAACTGCTTGTGCACACAGCCGGAGATATGTGGGAGAAGCATGAGCAAGAACTTCCTTTTTATTTTCTTCATTTTTACTTGTTTGTTCAAAGCAAATTAATAGGAAAAGATAGCTTGTGGATGCAAGACAAAATGCCATGTCAACCCTTTTTAGAAATTAAGCTGGAGCTTATGCAAGAATGTTTTATGGTTTAAAGTATGAATTGTAATACAAATTTGATTTTATTGATTAGATTGTAATTGATTTTCTTGGTAATTCAGTCTCATACAGTAGTTTGTTTCATATAATTGAAACAATAACAATAACTTCACAGGATTAACTTGGTTCACAGTGAGATGACATTGAATGTATTTAAGATTTTTGGCATACTTTACTCGGAAAAAGATATCCAGAACAATTTCTTTCCAGATGAAATACATGCCAGCGTGGAAAATATGGTTGATGTGCCAGAGCTGTGCAACTCTATTTAAAAATATCTATCCGAGA ........x..-:.x....:.xxx..::.xxx.:::...:..x..:.:.:::...:.xx..:.:..x.....x...x..:.x-----------......:..x..::.:---------..::.x.....:..-----..::.x.:.:....-.x:...:.:xxx...:..:x..:..x..xx:.x.....x.xxxx:.::.x...x.:xx.--------------..x....:.x.::.:.......x........:x..x:.x-----.....::...x:xx.x..-----------....x:xx.x...x.xxx......-..:::.x....:..:.........x..::.:x.......x...........x..........................--.:..--.x.x......x.:.:........:x.........:..:..:......-.........x...............x..............---..xx....:.............-...:..:............x-::.::.......xx.:..::.............:..x:x:..:.x:x..-----...:x:.....:-------------..x....:..:x..:x.-..x.x...x.-..:...----------..:xx..:::..:....::----.:xx..x....x..::x.....xxx.xxx..x.x.x:.x:.x:.xx:.:..x.::x.:.---.::x..:...---------------.:.:x...x.:...:...::x:...---..:.::x.:......x.x.:.....:.::x:...x.x:.x..........----.x........x....:::.x:......:...:...:.........:.::x..:.......:...:...xx.x..:........................:..x.........x......:.::........-.........x...........:xx......:.........x:....x.....::........:x.....x.....:xx.x.:x:..x.x....:..x.....x.........x:xxx.......:..x..x....x.--...-----:...::x..:x....x:..:...x:.:.----....x.x..:--.::x.:......::.::xx:..x.x.-------...x.---.x:...x:.x.x::xx:..x....xx:..--.x.......-.:.x.x.x.:.x:..---------..:x.....:...-------.x..x.....:x.:....-----...x..xx.:x.::..x....xx:--.x:x..--------..x.:x:.x....-------...x...:..::.:------..xx:......x..x.x..:.---.x.::.x......:x.x.x.:..-----...x.:....-------:.::...x.:x:x..-----------....:x..:x.x..-.:....-..x.x.:...x:.------::.:...:::.-..:..x.x::x.-----------......---....:..:x.xx.:..:x.:.x.:x.xx::.x:.x...:...x.x:.--------..:.------------.:..:.:.x....x.:.x:x:..-..:..----.:....:..x.x.x....:.---x..:.x..:..x.x-.....:..xx:x..x:..x.x:x.x.:x......x.....-...xx....---..x..:.::...-:.:.....x..------..:.x:x..xx..------...x.--..:.:.x.---------------------------.....x.:..:x...:------....x....-.x:..:...:-.....x:.:x..:--------..x.x...xx...x.-----..:..xx.....::--------....x...x:x-:...::x.:::x::..:--...x:.xx...--------....xx.--:...::.x::::::...-...:.x:::..x.x:..:----------....:.:..:::::.x-...:..:--..::.:....-..x.:..-------:..:x..:..:x......:.......x.:::.:.::x:.x:.::.x::.-.::.:.:x.:x:.:x.x.x...x....:x:::..:...:x.........:x.xxx..:.::x.:..:.....:.:....:.x:....xx.::.x.....x:..........:...x.......:.x................................x........:xx....................:......................................................................................................x....................x.......:...::........x.........................................-.x..................................x........................................................x....:.........:....................x.....................................:.......:..:::.:x...:...x...:.......:....-.:.:...:..x....:::...:..-.....x..x::...:..-x........::x::.:..:---------...:.::.x:....:---.:.:x..x..x.xx.---..:......:xxx.:..x:.x:....x:.:..x:...:.::.::...:...---.:x:...x.:.........x::.:.....:x:..xx:x:......::.:...---------.x.:..:.x..::.::xx..x.........::.:........x..:......:-------...::.:x........x..:.:----:.x.x..x:..::---------.x:....x.x..-..xx..x..:x..x.x:.x..:...:--------..:.xx:.....--------.:.:.:::x.........x.:x...xx....-----------------.:...:::..x.x.x..:.-----.x...:.::.:..:....x..--------------.x...x.::...:.---:::..:...x..::.:x.------:.....xx.::.x.....x...:.----.:.........-..:.x...:........:x........----......:......x...::.....xx::..:x....:.....x...x............:.:......................x...........:..................:......................::..:.................:x--.:......::.....xx:x...xx:xx.:::x.x.......xxxxx...x..-----------...x...x:.........x...xx...x.x::...:------.:.....:..:.x-.x.....x....------:.........x...x.-----------.x.x..xx:.:.:::....x...:xx.x..-----x..:.x.x..--..:..:---..:...x:x...x.....:...:----:.:..:x.:x:.:..----::..:.x.x:........:.---..:.:......:.x------------------------------------------...xx..x:::....:.x..----:...:x--.x.:x:.::...xx...:...:x::.x..:..::..x.....x....x..x.....x....:..::...x.x.:.:xx..x..........x...:::..x........x..:...:...............x:..x..:....x..x..........x:................x...:..:....:::............x.:.......x.....x.:..............:...x..............................................x..........................................x.............:.......................:.........:.............xx..x..............:.........:::........:..........:.........................:..................................:...........x.::.....:..................................:..:.............x............................................................................................................................:......................:...:.......................:....x.x.......x......x.........:.................................................:..........................:.::........::............x::.....................................:............................................................................................................-...........................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11M1I70M11I16M9I14M5I14M1I59M14D39M5I18M11I24M1I78M2D4M2D47M1D40M3I22M1D20M1D49M5I12M13I17M1D10M1D6M10D19M4I59M3D10M15D25M3I50M4D131M1D137M2D3M5D28M4D10M2D26M7D5M3D29M2D9M1I15M9I13M7D18M5I24M2I6M8I13M7D14M6D21M3D23M5I10M7D15M11I14M1I6M1I13M6D11M1D12M11D6M3D47M8D4M12D23M1D5M4D20M3D14M1D40M1D9M3D12M1I11M6I13M6D5M2D8M27I16M6I9M1I10M1I13M8D15M5D14M8I11M1I17M2I11M8I7M2I17M1I18M10I16M1I7M2I10M1I7M7I49M1D378M1D208M1D24M1I17M1I19M9D15M3I15M3I51M3D52M9D53M7I22M4D13M9D12M1D26M8D12M8I31M17D19M5D21M14D14M3D18M6D24M4D11M1I27M4D162M2I52M11I36M6I13M1I12M6D16M11I30M5I10M2D6M3D23M4D15M4I20M3D14M42I20M4I6M2D1037M1I118M1I159M3I65M1I7M6I72M1I14M1I71M1I29M 3669/4892 75.0% 5217/94230402 0.0% 630/4892 12.9% 75945878 NA +59547 chr4 + 190214555 111017824 111017823 111019377 1554 TTCTACTCATTCACAGCTTATTACAAAATGTAACTTAGAGCCATTTGTATGTGGTGCTAGAATCAGTGAGATAGTATTGT---GTAGGACTAATACTTCTAACTTCTCTGCCAGACTTTGGAAATCAATGTTCATTTCACACCCACTCCCTCTCCCCCAATAGTGCTCAACAAATACCAATGCTGGGAGAGATGACCCCTTTTAATTCCTTAATATAGGCCACAGTTCTCTTTGATTTATAGAAGACTGGTAGACTATTTATAAAATATGTATCTGCAAGATGCAGTTTATGAGAAACTTGGCTTTTGGGACACATTAATTCTAACTGCAGATGCAACTTTCATGTTTTATAATATAACCCTGACAGCTGTAATTTCAGATTAAAGATTTTTCATTCACATTCCCATCCTGATTGCTCTGCACGGTCCTTATATTACCTTATTGTCAATAGCAAGTGTTCACCCTATTGGGAGTCATTTAATAACCAGCTGCCATTTAAAATGTGGACAGAACATTTGTCTCAGCCAGGCCATCTCAAGTAGAGTTCCTCAGCATACAGAGCTGGGACCTCTTCAAGAAAAACAACAGCTGGCCTTCGCTATTGTCCCAACTTTTCCTTTTTTGTGGAGGCCAGTTAAAATAAACACGGACACTCTTGGTGAATTTTCTGAATGCATTTGTGAGTTTGTTATTTTAGTAACCAAATCGTTCCCTCTGTCAGTCTCACCCCCAATCCTTTA----TCCCACTCTGACCCCATCCACTTCATAGCCCAGGCTTTCATTCTTTCCTGAGTTCTATCAATGTATATTCCTC--TTAAAGTCACTTATA-TTGGTTACGCAGAATTGAGCAACATGAAAATTGTAGGTTTAGTA-GATATCATAAAACATCTGCTTTTCAGGAGGCGAATATATCAGTTTTTATAGATTATGTGTTGTAAATGATCAGACTGTAATTAAGAATAATATTAA-----TTATAACAACAAGACAATCTTCCAGGAATAGAATTACAAATCCTGGTTTGTC------------TATGAAATCTTTGTGTCCGTTGATATATGAAAATGAATTCATGATTGGTAATGTTTGTATTTAGTGTCTGCC-TTTAAATTTCCTTAACTTGACAGCTGGGGATTAGCAACTACAATAGGCAGCGGTGGTAAAA------GGAAATAAAAATGAAAAGTAAAGGAAGGCTTA-AAAAAAATGGACTCTTTCATGGCTAATTAAACCAGAATACAAATCAATCATTGGAAATAAGTGATGAATTTATTATG--CTTGAAGGCTCACTATACCCTGTAGTGTTTGCTATACACTGAAATTACAATTCTCATCAGCTTATAGGGTAATCATTTACCTTCAGCTTTACCTTTATCTATCATATTGATCTGAGA--CTCAGGCAAGGAATGGAAGGTTGGCAGTCTAAGTAAGTGTGGGGAGTTAAAGTGTCTCAGCTAAGAAACATAGGAACCTCT-GCCTAGCAGATGAAGACTTTACTTTATTCTCATTTCAAAT---GTTAGTAAAGTATCTCAGTCC--TACGTCCACAGGCATATTTAATTCAATAGATGGTAG chr4 - 94230402 35054020 35054019 35055517 59174886 59174885 59176383 1498 TTTTACACGTTCA-GGCTTGTAATAAAAGA------AGTGTCACTTGTCTGACACATTGAAGTCAGTAA-ATATCATTAGAAAGTAATACTAAGACCCGCA-----TCTGTTGGACTTTGTAAATCAATGTTCATTT---------------TTCCCAAATACTGTTCAACAAATACCAACCCCAGAAGAGATGACCC-TTTTAATTCCTTAGTATAGGCTACAGTTTGGTCTGATTTATAGAAGACCAGTAGTCTATTTATAAAAGATGTATCTGCGAGATGCACTTTATGAGAAACTTGGCTTTTGGGACACATTAATTCTAAGTGCAGTTGCAACTTTCATGTTTTATAATGCAACCCTGACAGCTGTAATTTCAGATTAAAGATTTTTCATTCACATTCCCATCCTGATTGCTCTGCATGGTCCTTATATTACCTTATTGTCAATAGCAAGTGTTCATCCTATTGGGAGTCATTTAATAACCAGCTGCCATTTAAAGTGTAGACAGAACATTTGTCTCAGCCAGCTCATCTCAAGTGTAGTTTCTTTGCATGAGGAGCTGGGACGTCTTCAAGAAAAACGACAGCTGGACCTCAGTATTGTTCC-CTGCTTCTTCTTTTGTAGTAGTGAGTTAAAACAAACATGGATACTCTCTGTGAATTTTCCAAATGCTTTTGTGG-----------TGCTAGTTAATTTGTTTACTTTTT---------------TTTTTTAAAATGCCCGCTTT------------TTGATAG---ATGCTTTTGTTCTTTCTTATTCAGTATGGATCTACAGCACTCATTTTGTGTTACTTAAAGTTATTTGCTGAAAGTTAAACAACAGCAAGATTATAGGTTTTGTGCCACTCCGCAGCATCTCTGCCTGTATACAGGTCAATTTCTCCACTGTCTTGAGCTA-GT-CTGCAAAGTATT---------TTAAGGCCAATACTAAAAGACTTATTTAAGAAAGTCAGTTTTC-----------TTTCTGAT-CTGATTTTCCAACCAAAGACATTGGGAAATAAGTATAAATGGT-CTATATGAAAATTAATTTGTGACTCCTAATGATTTT-TTTAGAACCTACCATTTAAATTTCCTTAACTTGACAGCTGGGGATTATCCTTTGTGGTAGTGATCTGTAAGAAAAAAAAGGGGGGGGGGGGGCGGAGAGAGAGGGAAGTTTCAGAAAAAAATTGACTCTTTCATGGCTAATTAAACTGAAATACAAATCAATCAGCAGAAATAGCTGATGAATTTATTATGTCCTTGCAAGCTTACTGTATCCTAATGTGTTTGATGTTCTCTAAAATTACTATTCCCATCATCTTATAGGGTAATCGTTTACGTTAAGCTTTACCTTTATCTATAATATTGATCTGAGACTCTCAGGCAAGTAATGGAAGTTTGG--GTTTATGTAAGTGTACAGCATTTAAACACTAGAGCCACGACAGGTTGGAAAACCTGGCCTGGTGATTAAACCCTTTATTTT----TCTTTTTAGATCAAGTTCTCTAAGTCTCCCAGGCTTGTAAACCTATGGGTTAGCTTAATTAAGTTAATGGAAG ..:...x.:....-:....:.x.:....x:------..x.:..:....x..xx::::.::.:.....:.-...x:...:x---...:x.....x..::x:.-----....:::.......x................---------------.:...x....x..:..............:x.::.:...........-.............:.......:......:xx.:...............::....x............x..........:.......x.......................................x.....x......................::..................................................................:......................................:......................................:...:.......................x:..........:x....:..:x....:x:..........x..............:........x.:..:x......:..-x:x:...:.:......:.x:.:x........:.....:...:.....:x..........::.....x......:-----------.:x..:::..x.:...:x..:.x.---------------.::....----x...:..:.------------..x....---.x.....::.......:.:xx:xx...x:..x..:.x:x...--..x:x..:.....x.-..:x..:.xx.:.:..:.:.....xx..:...:.......x..:-x.:x:.::.:x.:x.....:.x.xx:x...:x...x.x..x::.x.:x.::::..-..-:..:...xx..:---------.....:x:....:...-----....xxx.:x...x..:.:...-----------..x.x:..-...:...x:.------------.:x.....xxx.:.:xx:.x.-x...........x....::...:.xx.....x..x.-.....x::..:..-.................................x.xx:.::::...xx.x.x..::x....------..:::x::::::.:.:..x:.:.....x:.:.-........x.......................:::...............x::......:x................--....x.:...:...:..:...:xx.......x.:.x.x..:.......x....:.....x..............:.....x..x..................x..............--..........x........x....--..:..x........:x:.x:..x..:::::xx...:.x..x.x:.x....xx:..-....:.:::x.:..xx.....:...----..x...:.:..---...xx:x....x..:...x.:--..x::.:.::..:xx::......x.:.x:....x.. 13M1D16M6D33M1D10M3I18M5D31M15D46M1D409M1D74M11D24M15D7M4I9M12D7M3D42M2I15M1I44M1I55M1D2M1D12M9D16M5I22M11D8M1D10M12I21M1D36M1D13M1I61M6I32M1I77M2I117M2I24M2D55M1I25M4D11M3I21M2I36M 1093/1452 75.3% 1498/94230402 0.0% 148/1452 10.2% 75963804 NA +16250 chr4 + 190214555 111021054 111021053 111021435 382 GTTTCATTATTTACTGTAAACAAAGTACGGAGACCTCTGGAGGCTAATGGTGCTGTTGATTGGTGTTTACTCATCCCAGCAGGATCTGGTTTCTGATAATCTAGGACTTCTGTGTACTGATGAGTGTAGGCTGGTGGTGAACTAGTAGAGCCCACTTCAAGGTAGGAGAGA--------ATGGCTTGTAAGTTCTTTGTGGCTAGGTTGAGCTGAAAGACTTTGTTTATTTAGAATTCCTCCCAAGTCCTCTAGGACCCTAGCAAGGGCTGCAGAAGTCAAATTTCCTAACGTCCTGTGTGTCTTTGTAGAAGAATCTGGTTGGTAAAAGGCTAAATAAGAAATCTAC-CACATTCTTCAAAGGAGCCCAGGACATTTTATCAGATATTTA chr4 - 94230402 35056838 35056837 35057225 59173178 59173177 59173565 388 GCTCTAGTATTTACTGTAAACAAACTATACCATCCTCTGGAGGCTAATGGAGCTGTTGATTGGTGTTTGCTCATCACAGCGGGGTCTGGTGTGTGATA-TCAGGGACTTCTGTGTATTGATGAGTGTGGGCTGCTGGTGGGA-GGTATTGCTTGCTGGAGGACAGGAAAGGGGGGTGAGATGGTTTGTTAGGTCTTTGTGGCTGTGTGGAA-TGAGAGACTGTGTTTATTTAGCATTCTTAGCAAGTCCTCCAGGACCCATGCAAAGTCTACTAAAGTAGAATTCCCCCTATTCCCATGGATCTTTGTAGAAGTATCTAGCTGTTGAAAGACCAGACAAGATAGTGGCATGCTTGCTTAAAATAACCTTCATGCATCTGATCAAACATCTA .:.::.x.................x..::xx:x.................x.................:......x....:..:......x.x.....-..x:.............:..........:.....x.....::x-:...xx..:::..xx.:.::....:..:--------....:....x..x...........:x..x..:-...:.....x...........x....:.xx.........:.......xx....:.x..:.x:....x:....:..:xxxx...::..x:............x....:.:..x.:....:.:.:.:....x.x:x:.-::.x.x...x...x:.x.::x:x:...:.x....:.:..:.. 98M1D43M1D28M8I32M1D136M1I42M 274/379 72.3% 388/94230402 0.0% 12/379 3.2% 75964216 NA +14006 chr4 + 190214555 111037652 111037651 111038332 681 TTGGAGAAAGAATTTAGGACAGA--TAGATACTCTGGT----ATTCTC-------------TAAATTCCATTAACATAATGGAAGAG-GACTATG-TGCACACGTGTGTGTGTGTGTGTGTGTGTGATCTTGATATGTTCACAGTTGGTTGAAGATAGATTGGCAGTAACAGCTGCCACCAATGTCAACAATCAAGTACAATGAAGTGTGGCAACCCCCCGACTGCTTTTCATTCAAATGAGTTATGAGTTCTCACCGTTTAGAGTCACTCTCATTTTTAAAAAAATCA--TAAGCCGAGTTGTGAGAATTGGGGAATATCCACCTGGCAGGGAAATTTTCATGCTTTGTGAAAAAAAAAAAAGCGGAAAAAAGAGATTACATCAGATCAATCAAAGTCACTAGAAAATGTGAAAGTGAGAAAAAAAAGCAGTGAGAAATAACAAAAAAAGCAATCCAGGCAAACCCATTAATGAGAATGA--GTGTCAGTTTTTCTTGGTTCAAGGACTCTGCTACAATGGATTAGAACACGGAGCACCATATCAGAAATGCACAGAGGCAACTGCAGAGAGGCAA--------------GGGGCCCACTCGACCCCCAACATCAAAGCCTACTTGGAGAAAAAAAAAAATGCTTGGTTACTTGTAGCTTAATCCAACATTACACACTTCTTTCAAACATCAAAACTGCTGCTCAGCCTTTGGATGGCT chr4 - 94230402 35067037 35067036 35067678 59162725 59162724 59163366 642 TTAGAAAATGAATGTATGAAATACGTAGCAACTGTGGTGTGCATTTTCCCCTTGATGTGCTTAATTCCCATTAAACTGAAAGAGGAGAGACTGTACTGC-----------TGAATGTGAGTGTAACATTTTGATATGCTTCCAGTTGGTAAAAACAAGAGCGACATTAACAGCTGCTAACAGTGTCAACAGTCTCGTAGGATGAAGTGTGGCAAGCCCCCAACTGTTTCCCATTCAAATGAGTTATGAGCTCTGGCTGCTCAGAGGCACCCAGAT-----AAGAGACCATTTGAGTAGAGGGGTGAGACTTGGGGAATATCCACCTGGCA-GGATGGGCCCATCCTT--CAAATAAAATAAAAGGGGCAAAAATATTTT------------------------GGTAAGGGGAG---GGGAGAACTAAATTAGGAGAGAGGATGTAAAACGCTCTCTAAGTAGAGC--TCAGGGAAAGCTGTTATGGAAGTAGCCCTCTGTTTGGGGAATAGGATGTGCT------GAGGATGGAG------------AATGCTCAAAAGGAAATGCAGTGAGGCAATATGAGATGACTTGGGGGCCCACCCATCTCCCAATATCAAAGTCTGACTGCAG-------AGAATGCTTGATCACTTGCTGTTTAAT-----GTTACAAGCTCTATATTGATGTTAAAATTATTGGCCTGCCTTCTGAATGCT ..:..:..x....x..x..x.x.--...xx...x....----...:..-------------...x.:.......xx.:.x:..:...-....:.:-...-----------..x:....x....:xx..:........:.:x........x:..:xx...x:.:..x..........:.x..:........:..xx...x:..............x.....:....:..::...................:...x:.:.:.:....x...:.xx..-----..:.:.:..--.:..:x...xx......x.....................-...x:xx::...x...--::..x....x.....x..x.....x.xx..------------------------.:x..x.x..:---.:..:..xx..::x:x....:.x:.::x....x..xx..:.:.:.:.x.--.:.:x..:.::x:--:..xx...xx::..:x...:::...x.xx.x.:::x.------..:x.:....------------.....x..:.:.x..x.....x.......--------------.........:.:x.:.....:.......:..:x:..x..-------.:........:.:.....:x.:.....-----:.....x:..::x.x:x:.::.:....:.::..x:.x.....:x..xx... 23M2I13M4I6M13I26M1I7M1I3M11D165M5D9M2I39M1D16M2D30M24D11M3D49M2D13M2I37M6D10M12D29M14I39M7D27M5D51M 411/603 68.2% 642/94230402 0.0% 117/603 19.4% 75970615 NA +14952 chr4 + 190214555 111042339 111042338 111043098 760 TTAAAATTTTTAAACATGCTCTTTTTGATACAGTCATAATATC----ATCATTTATGTATTAGTTATATTGCAC-------AAATACTTTCCAGAAGT-TATAGCAATATCCTCTACTGTTTACTTAGTACTTGTTTCTAAAG--AAGATTGAATTAATCTTCTAAAAAAGAACCTCAAGTACCTGTGTTTCTTGTCTGTTATTATACTCATAGCAG-----ATTGCCAATGTCCTAGAAAGACAAAACGTCCAAACTCCAAAGAAAGAATACAATGTGCTCTTTCCACAT--GTTGGCCGGCAATAATAGCTGAAGGGTGTAGAAGCATGTGAAGATAC-AATTTCATTT-TTCCCAAAGCTTTGTTGGAGGTATAGAAGAAA--GTCTAGACATGATACTGGATTAAGAACTAACAACAAGAAGTTAGTGGATTATAATAGCAGGAAAGAATAATCTTCTGAATACTTTGTTGGGCTTACCTTGTATGTCAAATGTCAGCT----------CTTTTTTCTGCATATTTTCTGAAGACAATAGCATTGTTGATAGTTTTGCCTGAGCATTTGCAAGGATGCTTTGTTGAAACCAGTC-TGCCTTTGGCACATGGAGGCAGGACTGCAGTTGAAAGAGCAGAAAGGAAATGCCAGGGAAGTTTCTCCAAAACTATAATATTTGTTTACATTTTCGTGTGGGTGAGAGAAATGAAGCCACTTGTTAAGTGAC-AGAGTATT------GAAAACA--TACGTCACAAGATGTTACTGCCATAAAAACTTAAAATTTACACTGTTTTA chr4 - 94230402 35071299 35071298 35072071 59158332 59158331 59159104 773 TTACAATTTC---ATATGCTTTAATACATATAATGACAATGTCCAGTACTATGAAAGTAATATTTATTACGTATCCATGCTAAATTATTTCAAGAAATGTTTAGGAGTAGTTTGGAGTTCTTGGTTCTTGTATGTTTTGAAGGTAACAGTTTCACTAGTCTGATAA--------CTTAACTCTCTATGAGCTACGTCTCTTGTT-TACTTTCTGTAGGTGTAATTAC--ATATCC---AAAACCAAAAACTTGAAACTC-------AGAAAAC--TGTGCTATTTTAATACCATTTGGCTTAGAA-ATTTGCTGAAAGGTGTACAGATGTGTGAAGATAAGAATTTTACTAATTCCCTAAGACCTGTTAGGGGTTTTGAAGAAACAGTCAAAGCATGATACTGGATTAAAAGCTAAAACCAAGATCTTAATGGACTATAAAACCAGGAAAGAAGAATCTCCAAGACACATAATTGAGCTTATTCCATGTGTCAGGTGTCAACTGCTTTTTTGGCTTTTCTCTGGAGGCTTTCTAAAGACAAGAGTATTGTTTATAGTTTCTCCAGCACGTTTACAATTTGAATTGGTTGGATTCAGGCTTGGGCTCAGCATGTTTAGATGTGGCCACATGGAAAGGAGTAGAAAGGAAATGCCAAGCCATCACCTCCAGAACTATCATACCTGTTTATATTTTTCTGC---TACACCAAA--AAGCAACTTGTTGAATCATGAAAGTAATCCCCAAGGCCACATTTACGTCATAAGTTCTGTATGTTATAAAGGGTGAGGCTTTATGTCATCTCA ...x.....:---.:.....:.xx.xx...:.:.x.:...:..----.::..xx.x...x..x....xx:.:.:-------....xx....x....:.-.x...x.:..x::.xx.x.x:..:x..xx.::x.....:x..:.--.x::..xx.:..:...xx...--------..:..x.x:..:..xx::x:....x..:..-....:x:x.:..-----...:.--..:...---...:x.....xx.:x......-------....x..--......x...:x.:.:--x.....:x:x..-.x.x......:......x.::::..........x-.....:.:.x-.....x...x::....:.:...x.x.......--...x.::................:.:....x.x.....xx...:....:.....x.x..........x.....:.x::.:..x.x:...:.....:::::.:.....::.....:..----------.....:....x.x::.....:.......x..:......x.......:x..x.x:.:...:...xxxx:x..x....:.x:...x.-..xx:.::...::.xx..:::x.:.::..xxx:..:...:...............:.xx.x:x:.....:......x...::......:.....:x..:---.:x:xx...--....x.......:.:.x.:-.:....x.------.:xx...--.......:...x.x.xxx..::.....::x.x.::x....:::::.:.:. 10M3D30M4I27M7I17M1I44M2I21M8D30M1D12M5I5M2D6M3D21M7D7M2D16M2I12M1D34M1I10M1I32M2I117M10I85M1I99M3D9M2D19M1I8M6I7M2I50M 479/728 65.8% 773/94230402 0.0% 77/728 10.6% 75971040 NA +3219 chr4 + 190214555 111076861 111076860 111076902 42 AAAGCAAAAGAAAACCAACCAACCAAACAAACAAATGAAAAA chr4 - 94230402 63063423 63063422 63063464 31166939 31166938 31166980 42 AAGGCAAAAAAAAACCAACCAACCAACCAAACAAACAAAAAA ..:......:................x........::..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 48013438 NA +3367 chr4 + 190214555 111104196 111104195 111104264 69 TTCCTTTTCTTT----TTTTCTTTTGTTTTTTTTTTTTGTTTGTTTGTTTTCTTTTTTCTTTTTTTTTTTTTT chr4 - 94230402 45023708 45023707 45023780 49206623 49206622 49206695 73 TTCCTTTTATTTACCCTGTTCTTTTGTTGTCGTTGTTTGGTTGTTTGCTTTTGTGTGTTTTTTTTTTTTTTCT ........x...----.x..........x.:x..x....x.......:...:x.x.x.:............:. 12M4I57M 55/69 79.7% 73/94230402 0.0% 4/69 5.8% 66080488 NA +29146 chr4 + 190214555 111106009 111106008 111107136 1128 ATAGGCTTTCAAGTATTCTGTGCTTACCTTTGTGATGTGTGATTGAAAAATGGA-GCAGCTTTTCTTTTGATTTTCCTTTCCATCTGGTTTTTACATCTAACAATCCAAGAGCTATATCATTTATCCCTCAAAATGGTC----TCTATTTTAGTTGA------------CTAGAGTTTTTTTTCTTTTTTTTCTGAAGGCTGAAGT---CTATCCTGTGCCCTGTAGGACTGACTCTATTTCATATATCAAACATTCCTCTAGCTGATATTAGTGGGGTA--AAACTTTCTACATTTTATATCTGTGATTTAAAATGAGACCAAAAAAATTACTTACCACAAGTTTTTAACAATAATATTGATGGTTGAGACTTCACAACTGGTGAATTAGAATGTGTATTTGTTCAGGTCAGTGAAA-----CCTATTTTCACACAAACAAAAATGGTTTAGTTTACTGTACAAAATAAATGAATCAGTACATATTAATCACAATTGCTAACAAAAAAACT-TGCTATATATTTGAAAAAAA-------TAAACAATAGATCCTCTGTTCCAAGAAACATTTCATCTAAGAAAAATTGATTTTGTAATTCAAACCAGAAATTGCTCTAAATATTCAGCCTATGTTGGCTCATTTTGTATGTCATTTTATCTGGGCAACTTGTTGACATT--TCTGTGTTTGTAACTTCATAGGCTGTGGTCATTTGTTACCCCGACATCACCCATCTGCACATGCATTTGTCATTCTTCTGCTGAGTTGGGCTC-------------CACTTGAGCAATGGGAAGTTGGGGCTAGTGGAATAATACTGTT--ATGTGAAGGATATCATTAGAGGACAAAACCGTACTTCAAAGACCAAGCACATATGGTTTTGACTTTCATAAAGATGGCAGGTGGACATGAAAAAAAGGTTGATTTCAAATTTATTTCCATGATAGGAGGAACTTCTTAAAAGTCTGAGGAAGATTAATTTTCAATTTGGAATACCTAATTACTGAAACATGATCAGGGTTTTACAACTTCCGGAGGTAAATTTTTGGGATGACTAAGCTATCCTCATGGAA---ACCAATGGAGCAATTTAATAGAAGTCTCAGAAT--GATAAAATACTGGCAAATGTTTGGTAAGATAAGTTTTAGAAAGCCAACATGTGTAGACTACAA chr4 - 94230402 35080465 35080464 35081599 59148804 59148803 59149938 1135 ATGGGAATGCTAGGATTCTGTGCTCAGCTTAGCATGTTGTAGATGACAAATGAAAGCAACTAGTCATTCAATTTTCCTGACCATCTGTTTTATATGTTaaaaaaaaaaaaaaaaaaaaaaaaaGCAACTAAGGAAGTTCAATTTTTATTGTAGGGGAAAAAAAGGAAAGCTGTAACTGTTTTAAAATCTTTGCTGAGACCAAAATTGCCTTATTTTATCTCAGCCAGCACTG-----------CATGTTGTGCATTTTGCTAAGGCAGAACAGCAGAGAAGCAAACCTGC-ACACTTTAGAT----GCTTTTCAA--AGACCCGCGTAGTGACTTAGCTTGTGTTGT-AGCAGTGACA------------ACTTCATT-CTGTCCAACTCAGATCTTTAGTTCTTAAGG-CACTACAAGTGCTTTCATTTTC---CTAACAA-----GTCTGAAGCCTTGTAGAAAATAAGGGAATCAGAGTCCATTAATCAGAATTACCAATGTGAAGGCTGTGACATAAGTTTAAAAAAAAGAGTCCATAAACAATGGCTCCTTTGTAAGGAGAATCATTTTGACCCGGAAAAAAGTGATCGGTAATTCAAACCAGAAATTGCCCTGAATGTTGAACATATATTGGAATATTTCATGGGCTGTTTTATCATTGCAACTTGTTGACATTATTTTGTACTTGTGACTTCATAGACTATAGCCATTTGTTACATCAGCATTAGACATCTGCACAAGCATTTGTCATGCTGCTGTTGAATTTTTTTCTTTTTTTTTTTCCCTGTTGGCTGAAAGAAGGTTTGAGCTCATAGAACAATATTGTGGAATGTGAGGGCTATCATTAGGGGGCAAAGCTGGACTTCAAAGAGGAAGCACATATGGTTTTGACTTTTATAAAGATGGCAGGTGGGCATG-AAAAAAGGTTGATTTCAAATTTATTTTTGTGATAGCTTCAACTTCTTAAAAGTCTG-GGATGATTAATTTTCAATTTGGAATTCCTAATAACTGAAACAAGATCGTGGTTTTACAACTTCCTGAGGTAAAAACTGAGAGAGACTGAGTCATGTTGGTATAATATACCAATGG-------CAGCTGAAGCTGAAAGATTAGATAGATCAGTACAAAATGTTTTACAAAAAGCTTTTTGAAGGTAAAACATGTTTAAGAAACAA ..:..xx.x.x..x..........:.x...x.::xxx...::x...x.....:.-...:..xx..x..::........xx.......x...x..::.:x..x..xxx..:.:xx.x.xx.xxx::xx..x.::.x.x..----.:....x...xx..------------..:x.::.x....xxxx.:...x....::x.x:..x.---:...::.:.x:.xxx:..x....-----------:..:.::x:....::x...:xxx.x.x:..::.:.x.--....:.x.-...:....x..----.x...xx..--.....x:x:x.:.x.....x.x::x...x.-.:..:.:.:.------------......:x-...x:x..:.x::..x.x..x..x..x...-..x.:x..-----:::......---.x.....-----..:.::xx:x:....x.......:x.......x::x:........x....:.:..::x:..::..-..x:...x:...:.......-------........:.x....:...xxx:....x.....::x.:x:......xxx:x.:x.....................:..:...:..x.:.x...:....xx:....::.:x.:::.......xxx................--.:...::....:.........:..:.:.:..........x:.::...:.xx..........x...........x..x...:...:..xxx:..-------------.xx...:x::.x:.:.:...x.:...x:.:...:....:...x--......:..x.........:..:....:.:.x..........xx......................:.................:....-..........................:::......xxxx.................-...x.....................x......x.........x....:x...............x........xx:.x:.::x....:..::..x:.x:.:x..---........-------:.::x....::xx.::..--....:.x:.x.:xx........x::..:.x:xx....::.::xxx.......x..::xx.... 54M1I84M4I14M12I37M3I23M11D37M2I8M1D11M4D9M2D30M1D10M12D8M1D30M1D8M5I9M3D7M5D65M1I20M7I140M2I93M13I43M2I89M1D56M1D104M3I8M7D18M2I63M 733/1078 68.0% 1135/94230402 0.0% 107/1078 9.9% 76025544 NA +72143 chr4 + 190214555 111114748 111114747 111116181 1434 CTTTTTTGAAGCTTAACAATATTACTGCTTATGGATCTTTAAGCCATTAAAATGAAGGCAAGGGTACTTAATGGAAATTCTTTTATTAAAAATGTTTGGTTATAAGTAAGAGGCAGAACAATGTGTAAGATATATTAAAGGATGATAATAAAATATTAGCAATAT-TAACCTTAGCATTAAAATAATGGTAGATGGTACACTTGATACCCTTCAAAAATCCTGCAGGTCTTATTCACTGTTCAGAGTTTGGGCTCTTCACTCTGGCTAAGAAATGTATAGCACTGCTGCTGAAGATTGGAAAAAGAGGTTGAGGTCAGAGGTTGACACAGTGAGGGAGTTTGCTCTTTAAGAGGTTATCTGTGGATCTGCAAAGCCAAAGTGTAATTGGGTTTTGTGATGTGATTTTAGTGTGTAATTGTATATGATCTTAG----TTTCAAAGACAAGCTTGGAAGATTTTTCTAGCTTGTTTGTGATACCAATTTTAGGGATTGTGTGCAATCTTGGATGGACAATTCAGAATGATCAAAAATAGCCATCAGAAGTGATACAGCAAGTATTTGATTCACTCTAATTATAATTTCAGCACATTGATTCTAATGTGATATGTT---GTCTTTTTTAGGACATTACATTGGTTCGGAAAATAAAGA------------TATTTATTTTTCATGGCTAGTATCAATATAGCCAGTTTTATGTCATCACTGTGGCTCTCAGTGTTTCAGAGTTTGAACTTGAGGATTACTGAATTATTATAAAGAAAGAAAAAAAGTTAGAGCGTTGTAATTGGT-TGTCTAG-------------GGGGTTTTTGGCCACAAAATTTGTTA-----------AGTTTCTGATTCCTGAATATTCTTAACAATGGAAAATAAACACTTCCTTATTGTTTTAGTTGTTTAGGGATGCCTTGATTAAGCTGTCACTGCTGTCAGTTAGGTTCTTATAAGCCTGGTTGGATCTATTTCATGTTAGGAAAAAGCTCAGATAAATCCAGGAAAGCTTAATGTTTATCCAATGTGAAAATAATTACTCAAAAGTGTTATTCTTAATCCAGATAATTAGAGCGAGGAAGGAAAGATCAGTGTCATTGTGAATTATGTCCCGGCAATTGACTCTTGGTCCTTGTAAGTTTCAGGTGAAGATGTGAATGGATAAAGGTTAGATTAAACATAATCCAAAGTAGCTGCAACCTTAATCTGTTATGATACAAGGATGATCACTTAAAAAGAGCTGGATTGTGGGATTGTTTCTGGTTGGATAAGATGCTGCTCAACTGGGACTAGTCTTAAAACATGCTTAGCACCATGTCACTGCAGCTGTAAGCACTTGTGCACGACTGCAGCCTGCCACAACTAACAGGC--GCTCCTGGGCTCAAGCTGTATATTGGAGTATCATAC--TTTCACAATCTCTGGGCTTCATATTAACATGCCTTCCAACAGTCTGCATGGAAAA chr4 - 94230402 35086102 35086101 35087519 59142884 59142883 59144301 1418 CCCTTTAAGAGCCaaataaaattattacttataaattattaaaaGCCTTCAACAAATGGAAAAATACTTACTGAAAACTCCTTCATAAATAATGTTCAAACTAAATTAAATACTAGTATAAGG-----AATGCATTAAAGTTTATGAATGAGATGTTAGCAGTGTGCTCCCTTAACCTTAAAGTTATGATAACTGGAGCACTTGCTACCACTCCAAAACGTTGCAG-------------CTCCAAGTCCTGGCTC---ACTCTGGGAAAGAAACATGTGG---TGCTGCTGAAGATTGGAAAAAGAGCTTGAGGTCAGGGGTCGACACAGTAAGGGAGTTTGCTCTTTAAGAGGTTATCTGTGGATCTGCAAAGCCAAAGTGTAATTGGGTTCTGTGATGTGATTTTAGTGTGTAATTGTATATGATCTTAGATAGTTTCAAAGACAAGGTTGGAAGATTTTTCTAGCCTGCTCGTGATAGCAATTTTGGGGAGCCTGTGTAGCTTGTGATGGACAGTGCAGTTTCTTCAGAAACAGTCATCAGGAGTGATAGAGCTGGTGTCTGATTCATTTAAGTTATAATTTTAGCAAGCTGGT---AATATGATTTGTTTTCGTCTTCTCTGTAATACCA-----GTTCTGTGAATCAGCAGCTTCATGCGTGTTTCCATTTTCTACAACTGGTA----------AAGTCCTGT-TCACTTCTG-AGCTGGTGTCGTGCCAGAG----------AAAATT-TTGCATCTTTATTAAGACG--ATACAAGTCAG-----TGTAATTGATCTGCCTGGCTGTGGCTTTTCTGCAGTCTTTGAGTAAATAGTTTGTCAGTGGGTTATCAAGTTTCTGGTTCTCGATTATTCAAAACAGTGTGAAACAAACATCTCCT-ATTGTTTTAGTTGTTTAGGGTTTCCTTGATTAAGCTGTCACTGCTGTCAGTTATGTTCTTATAAGCCTGCTTGGATCTATTTCATGTTAAGAAAAAGCTCAGATAAATCCAGGAAAGCTTAATGTTTATCCAATGTGAAAATAATTACTCAAAAGTGTTATTCTTAATCCAGATAATTAGAGTGAGGAAGGAAAGATCAGTGTCATTGTGAATTATGCCCTGGCAATTGACTCTTGGTCCTTGCAAGTTTCAGGTGAAGATGTGAATGGATAAAGGTTAGATTAACCATAATCCAAAGTAGCTGCAACCTTAATCTGTTACGATACAAGGATGATCACTTAAAAAGAGCTGGATTGTGGGATTGTTTCTGGTTGGATAAGATGCCGCTCGACTGGGACTTGTCTTTAAACATGCTTAGCACCATGTCACTGCAGCTGTAAGCACTTGTGCACGGTTTCAGGCTGCCGTGGCTCAGGGACAGGCTGTTGGTCTC--GCTGCACACTGTAACACTACACTGTTGTGCAGTATCTGTGCTTTACATTAACATGCTTTGCCGTGTGTTTCATGGAAAA .::...x::...:x..:..x....:.:.....::..:x....:xxx:.xx..::..x.x..:::......x..:...:..:..:..x..x......:::x:xx..x...:x:x:..x.:..x.-----:..::.......xx.:xx...:.:..:......:.:.-:xx.....:.x.....:.x...:..:x...x:......x....x:..x....:x:.....-------------:..x:...::x.....---.......xx......::.:.:.---........................x..........:...:........:............................................................:.......................................----.............x..................:..:.:......x.......:....x:x....:.:::.xx........:.x...xx.xx...:...:..:......:.......x...x:..:.:.......:.:x.:.........:....x::..:.---...:....x....---.....:.:.:x:.:.::.-----....x.x:...x.:x.------------.x.::.....::.:::..:...----------x...::.:.-...::x...-:...xx::x:..x:.....----------.::...-:..x..:x....x....x:--.x.x....:..-----........:.-..:..:.-------------.x:..:....:x:.x.x.:.....:.-----------........:...::..x.....xx....:..x:...:.....::....-....................x.x..............................x...............x...................:............................................................................................:..................................:..:......................:.........................................x..................................:...............................................................:....:.........x.....x...............................................::.x...x.....::::..x.x:.:.--...x:...x...--....:.:.:..x.::.::.:..--..x::..:.x....x....:.:..........:..x.x:::xx:.x......... 123M5D37M1I60M13D16M3D22M3D149M4I161M3D13M3I18M5D16M12I22M10D9M1D9M1D19M10D6M1D19M2D11M5D10M1I7M13I26M11I48M1D479M2I12M2D22M2I55M 1094/1369 79.9% 1418/94230402 0.0% 114/1369 8.3% 76028646 NA +3169 chr4 + 190214555 111123631 111123630 111123695 65 GAGAGAGGGAGGGGGGGAGAGAGAGAGAGGGGGTGGGGAGAGGGGGGGGGTGGGGAGAGAAAGAG chr4 - 94230402 93125420 93125419 93125483 1104920 1104919 1104983 64 GACAGAGGG-GAGAAAGAGAAACAGAAGGGGGGTGGGAACAGAGGGGGTGCGGGGGGAGGCAGAG ..x......-.:.:::....:.x...::.........:.x..:.....x.:....:...:x.... 9M1D55M 47/64 73.4% 64/94230402 0.0% 1/64 1.6% 17998211 NA +4049 chr4 + 190214555 111189141 111189140 111189292 152 AGTGTTGACAGAATGTTCACCAAAATCACTTCAGAGCCTGACACATAACACCCAATCA-ATGGTCTTCCTTTCTGCTCAATTTTTCTTTCTTCTGAAATATATTCTTTTACTTTTTGGATATTGATGAACAAATGCCTTGTTTTACTTTATTA chr4 - 94230402 35096069 35096068 35096207 59134196 59134195 59134334 139 AGTGATGACAGAATAGTCCCTACAGTCGCGGGAGAAGCTGACACATCACACCCAATTATGTGGCCTCCCTGGCCCCTC-ACTCTGCTCTTCCCTGAAATATAAGCTTTCTGTCTC-------------ACGCACACTCtattttattttttta ....x.........:x..x.:.x.:..:.xxx...:x.........x.........:.-:...:..:...xx.:x...-.:.:.x..:.:::..........xx....:xx.:.:-------------..:x.::.::.:.....:...x... 58M1I19M1D36M13D25M 93/138 67.4% 139/94230402 0.0% 15/138 10.9% 76093072 NA +3806 chr4 + 190214555 111197450 111197449 111197518 69 ATGTGAGTATATATACATACATATATACACACACACATATACATACATATATACACACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA .....x....:.:.:....x.:..:..:x:...:.::...:.x.....xx................... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 102801662 87412893 +3371 chr4 + 190214555 111197451 111197450 111197528 78 TGTGAGTATATATACATACATATATACACACACACATATACATACATATATACACACACACACACACACCATTGAATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:x..:.::...x.:.::...x....:.:::.:::x.....xx...:.:.............x....x.x...... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 102801658 87412897 +3173 chr4 + 190214555 111197457 111197456 111197519 63 TATATATACATACATATATACACACACACATATACATACATATATACACACACACACACACAC chr4 - 94230402 7596414 7596413 7596476 86633927 86633926 86633989 63 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ..:.x..:......x..:..:.:......::..::.....x.:...:..x:..:...:...:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 103601043 86613512 +48427 chr4 + 190214555 111204486 111204485 111205268 783 CCTATGACCTTTAACTGGGAGACATATATAAAGATTGCACGCTAATGTCTCAACTGATTTCTTTCATTGTTATTGGTAACTTTTATACATAAGGTTCTTATTGTCCCTGTTGAAG-GGAGAGGTAAAATCAATTTCCTCTTCAACATATTGATAAACAACTCCAGATATAAGAGGTAGGGAGGA--GAAAGTAGATTTACCTTTGTGTGACCTACAAAGGAATGCTGGAAAAATTAATTCCAGAATATTATGTCAACATTCCTTGAAGTTGTGGGTATGATTTACATAGTAGGTCTTCTCCATCCACCCAGCTACTTTCATCTTGATACTGTAAATTGCTTTCATTTTCC-CCCTCCGATCTGTGTGCTTGAGGTATTGTTGTGATAAATTATGGAGGTACAGAACTGAAAACGGTGTGTAGATTGTCTAAGAAATTGAGTGCAGTCAGCCTTAAAAGTGGTGGATGATGTGCTAAAGCAGCTACCTCACCCTGACCATGTCCCATATGTCGTCAATGAACAGCTGCTTTTAACTTTGCCTTTTGCCCAGAGCAC-AAGAGCTGCTGGATTTATTGAATTAATAACCACTCCATTATGTGTGTTTTGTTTTCCTGTGACCGTGAAATCTGGCTATAATGTTAGGAAAGTGTAAGACAGGTCTCCTT-AACAAACAAGGCAGTACCTATTTTGGGGGTCATTAATTAATACTTAATCTTTTGGGTAGAAAATAATAGGGAAATCCTTTCAAATCTGGAATAGAATGCTGCTAACAATATTGAGTTAAAAA chr4 - 94230402 35100372 35100371 35101155 59129248 59129247 59130031 784 CCTACAAAATCTGAAGAGAAGACATGTAGGCAGATTGCATGCTAATTTTTTA-CTGATTGCTGCTATT-TTATCAGAAGTTTTTATACATAAGGTTCTTATTGTCCTTGTAGAAAAGGGGAGGTAGAATCAATTTCCTCTTTAACATATTGATAAACAACTCCAGATATAGTGGTTGGGGGAGGAGGAAACTACATTTACCTTTGTGTGACCTATACAGGAATGTTGGAAAAATTAATTCCAGAATATTATGGCGACATTCCTTGAAGTTGTGGATATGATTTACATAGTAGGTCCTCTCAAGCCATCCAGTTTCTTTCATCTTGATACTGTAAATTGCTTTCATTTCCCTCCCCCCCATCTGTATGCTTGAGGTATTGTTGTGATAAATTATAGAGGTACAGAACTGAAAATGGTGTGTAGATTGTCTAAGAAATTGAGTGCAGTCAGCCTTCAAAGTGGTGTATGATGTGCTAAAACAGCTACCTTCCCCTGGTCAGGTCGCACATGTCGTCAATGAGCAGCTGCTTTTAACTTTGCCTTTTGCCCAGAGCACTGAGAGCAGCTGGATTTATTGAATTAATAACTGCTCCATTTGGGATGTTTTGTTTTCCCATGACCATGAAATCTGGCTGTAACATTAGCAAAGTGTAAGACAGGTCTCCTTCACCGACCAAGGTGGTGTCTTTTCT---TGTTACTACATAGTATTTAATCTGTAAGGCAGAAAATAATTGGAAAGCTGTACCTATGGGGGACTGAAATGTTTCTCAATAAACAGAGTTAAGGA ....::.xx.:.:.xx:.:......:..x:x........:......x.:.:.-......x..x::...-....::.x.::..........................:...x...:-..:......:...............:............................:x:.x.:...::.:--....x..x....................:.x.......:...........................x.:...................:....................:....x.x...:....:.x.................................:..-...:..x......:............................:..................:........................................x.........x.............:.........:x.....::..x...x..:.............:...................................-:.....x.......................::.......xx.x:.............::.....:............:...::....x......................-.x.:.x.....::..::..x..:.---x..:.:..xx..:..:.......x.x:..:..........x..:..:::x.x:.x.xxxx...x.::....:.x..x.xx.x.:x.......::. 52M1D15M1D46M1I68M2I164M1I204M1I110M1I24M3D95M 645/778 82.9% 784/94230402 0.0% 11/778 1.4% 76104114 NA +3136 chr4 + 190214555 111205411 111205410 111205528 118 TTTATATATATATATACACACACACACACACACACACACACACACATATACACACACACGTATATACACCCACATATATATGTATATTTATATGTATATTCCCTA-ACAAACATCTAAA chr4 - 94230402 4417338 4417337 4417456 89812947 89812946 89813065 119 TTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAA ..x.x..x..x.:...:.:.............x:x...:..:..::x:x::x::....:....xx.x:.x:x:.x.....:::........x.:...:::x.xx.-..x.....x.... 105M1I13M 73/118 61.9% 119/94230402 0.0% 1/118 0.8% 106788073 83426482 +3034 chr4 + 190214555 111205416 111205415 111205481 66 ATATATATATACACACACACACACACACACACACACACACATATACACACACACGTATATACACCC chr4 - 94230402 17520749 17520748 17520814 76709589 76709588 76709654 66 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCC .:.x.......x.....x.:.....:...::::x.::.x::....x.....::.:......:.... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 93684667 NA +3126 chr4 + 190214555 111205424 111205423 111205489 66 ATACACACACACACACACACACACACACACACATATACACACACACGTATATACACCCACATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...:.:::..::.........:..............x:.x::x..x..:......x:..:.:::.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 44300577 NA +3133 chr4 + 190214555 111205737 111205736 111205821 85 GCCATTTTGACTGACCTGGTTTCTTTTCTTCCTTTCTTTTCTCTCTCTCCCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTCTTTT chr4 - 94230402 8439366 8439365 8439444 85790959 85790958 85791037 79 GCCATCTT------CTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTT .....:..------.:x.......:::.x.x:.:.x..:..:..:.x:...::...::::..:.......:...:..:....... 8M6D71M 53/79 67.1% 79/94230402 0.0% 6/79 7.6% 102766371 87448184 +3860 chr4 + 190214555 111205757 111205756 111205948 192 TTCTTTTCTTCCTTTCTTTTCTCTCTCTCCCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTCTTTG-TTTTTCTTTCTTTTCTTTCTCTCTTTCTTTTTCTCTCATTTTCTCTTTCT---CTCATTCTTTT---TTCTTTCTTGCCAACTCGCTATACATTGCTCATGTTTCTGCCCTAAATT chr4 - 94230402 28459066 28459065 28459255 65771148 65771147 65771337 190 TTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTT-TGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCC----TAC----CTGATGTTTCTATCTTTATTT ..:....:..x..xx....x:.x.:x..::..x.x..:...x...x:.:...::...::..:.xx:x.:.x...::x..:.:-..:.......:.:.xx..:.-.x.x::...:.....:x.x........:.---....x....:.---x.x........:::.:.----...----..x........::.:.x.x.. 82M1I20M1D29M3I11M3I17M4D3M4D21M 119/183 65.0% 190/94230402 0.0% 16/183 8.7% 82746691 NA +3208 chr4 + 190214555 111205790 111205789 111205881 92 TCCTTCTTTCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTCTTTGTTTTTCTTTCTTTTCTTTCTCTCTT------TCTTTTTCTCTCATTTTC chr4 - 94230402 35294594 35294593 35294683 58935720 58935719 58935809 90 TCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTC--------TTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC ..:..:.::...x.x..x......:...:...x.....--------..:....:...:..:...x..:.::...------.x....::.......::. 38M8D28M6I18M 61/84 72.6% 90/94230402 0.0% 14/84 16.7% 75911196 NA +39958 chr4 + 190214555 111210458 111210457 111211183 726 AAGTAAGAAATCCAGTGTAAATTGTTTTAATCCTTTCTAGTCAAATTAATATGGTGTGGATGTCTTGTGGATACAAACTCAGTTATCTT----TCTTGT-----------TGACACATATAAGAAAATTCTGGCTGGGCACACATGATTTATTCTTTATATCTGGAGCTGTGCTGTAATCATTCACC--CTTTTTCAAGTCGAGTTTGGCAACTTTATCTCGCTTGCAGTTTGCATTTTTTGAAAGTGAAAATATATTCTGCAGCTTTTGATGTGTTGATTGGTAGGAAGGTAAAGACAGCTGCACACA-GTCCCTGGAGACAGGGCTCAGTGGCTAAATGAAGACCTCTAGTGCTTTCTTGTTAGCCAAGATAGATCTACATCCCCATGAACCACAACTAGTCAATAGCAGAGGCTCTCAGTGCATGTGATCAGAAGCCACAAATCAGTTTTCCCTGGGACTTAGTTATCGGCATATTGTGCCGTAGGCCATGCCCCGGTGCTGCTCGTTTGACTGTAATTTTTCCCCCAGTGAAGTTTTTAAAGTCACGGGCTGAGACTGTAACTGTGCTCTCTTGGCAACGAGGCTGTCACTAGCCTGCCAGATATCAATTGCCCATCAGATAAAT----TGCTACTTTAATGTACTCAGCCACTCACTATTAAGGAGGTTT--AATGCTACCAGGATTT-----------CTCATTATGTTTTCCTCTCCAAAATGTATTTCCAAATGTCTCCTTCCTTAAGACCAA chr4 - 94230402 35105585 35105584 35106338 59124065 59124064 59124818 754 AAAAAAAAAAGCCCACTAAAATTGTTTTAATCCTTT--AGTTACATTAAAATGATGTGGCTGTCCAGCAGATA-AATCTTATTTATCTGCTCATCTTATCTGTTCTAAATTTATATATATAGCAAAGTTCTGCATGATCATATATGATTTATCTTTTGTTTTTCGAGTAGAGTCATAATCATTCACTTTCTTTTTCAAGTCTAGTTTGGCAACTTTATCTCACTCGCAGTTTGCATTTCT-GAAAGTGGAAATATATTCTGCAGCTTTTGATGTGTTGATTGGTAAGAAGGTAAAGACAGCTGCACACATGTCTCCAGAGACTCAGCTCAATGGCTAAATGAAGACCTCTAGTGCTTTCTTGTTAGCCAAGATAGATCTACATCCAGATGAACCACAATTAGTCAATAGTGAAGGCTATAGGTTCATGTGATCAGAAGCCACAAATCAGTTTTCCCTAGGACTTAGTTATTGGCAGATAGCGCCTTAGGCTATGCCTTGCTGCTGCTTGCCTGACTGTAATTTTTCCCCTAGTGAAGTTTTTAAAGTCACATACTGAGACTGGAACAGTGATCTCCTGACAGCGAGGCTGTCACTGGCCTGTCAAATATCAATTGCTTATCAAACAAATTGTCTGCTCCTTTAATGTACCTGGTCCTTCACTATTAACAAAGCTTAAAATGCTGCTGTTTTTTTTTTCCTGTCATTTACTGTGTTGGTATCTGCCTACT---TATCCATATGCCTCACTATTTTGGACCAA ..:x..:...x..x::xx..................--...:.x.....x...:.....x....:x.::....-..x..:.x......x----....:.-----------.x.:.:.....:x...:.....xx..:x..:.:.........::...:.x.:.x...:x.x.:::...........:--............x...................:..:.............:.-.......:....................................:.......................-...:.::.....xx:.....:......................................................xx...........:..........:::.....x.x:..x.................................:............:....x..x.:...x.....:.....::.x.......:.::..................:....................:x:.........x...x...x....:..:..:.............:.....:..:...........::....:.:....----....x...........:::.:.x:..........x:.:.:..--......:.::xxx...-----------:.:.:.:....xx:x...x.xx.x.---.x....x...:...x:.x:..x:...... 36M2D35M1D15M4I6M11I77M2I51M1D68M1I319M4I42M2I16M11I25M3D29M 580/719 80.7% 754/94230402 0.0% 42/719 5.8% 76104873 NA +19926 chr4 + 190214555 111213662 111213661 111214696 1035 CACAGTAGTGGCTGTT-TGGACTTTGAACAACATATTAGTGAAGTCAAGTCACACATTTCTCGATGCCATTACGCAAACACAGGAAGAATGAAAGCCAGAGCTTGTAAAAGTAATTCTTGGAAGGCTTCAGGAGTGTATAAAATGTGCTCTGTAATTTTCAGCCTCCTGCAGTGCAAGTGATTAGCTAAAGAAACACTTTGAACCTGTTAGTTGTACATCTTTT-AAACCATTTTAAATTATGGAAAAGATAGTCCTCAAGAAATTAATTTAAGTTTTGGACAATAATGCAATCAGGGATATCTATGTTTGCAGTCTTTTCTCTCTGCTTGCATACATCTTTC-TCTGTCAAGTACATCAAACAGCTAATTAGCCTCATTTTAAGAGCTTCTCTGCTCACATCA---------------CTTAAAAGGA---TCTCCAGGCCGCCT--------------TCTTAGAGAGTTCACACTTTCTGTGCATTGGCTTTCTGAAAGTT------TCTTAG-------TCTTTG-AAGGAATCTATTCCCTACAT----------------ATTGGAAGAACTTTAAAAGTAGA--------------TGGACTTTC------CTTCCCACAAATCAATTTTCTT---------------TGTTTTCTCACTTATGA---TCAACATTTT-----ACAAATAATCTTGTAAAGGTTGAT----ACATATATTTTA-----CCTGATATTTGCTTATTTTAGTTAAATACTCTTGGGTTTGCTGAAGACATCTGAAAAACATTAGAATGAC----------------TGCTTTTTATTAAGACATGTGGTGCCAGGAGAAAAAAAAATTGTGAGAGACTAAAGTGTTGCTTTCATTTAGCA-------TAAAGTGTTA------CTACACTGACAAA-------AGTTT-----GATGTTTCAAATACCCACTTTAGAAGTAACTACAGGTCACATGATCTACAGATATCACATGTTAGCACAT-GTTAAAAGTTATAACCATAACTAGAGACAGAATTTCTGACTCACAGCTTCCATTAATCTGAACTATCATATGTCATCTCAAGTTGACTATAAAAATAACTCAAGACACCAGCGTGCTTCAATTAACAGCTGAAATATTGTGATATTTTAACACAGGTGATATAAAGAATCAGAGC chr4 - 94230402 35106829 35106828 35107975 59122428 59122427 59123574 1147 CAAAATGGTATCTGCCATGGCTTCTGGACACTACTCTGTTGGAATCAAATCACACCTTTCTCACCGCTACTCTGCAAACAAAGGAA-AATTAAGGCCAGTGGAACTAAAAGTAATTCTTCAATGAACT---GAGCATATAAAACATGCTTTAAAATTTCCAGCACCCTGCAGTGATGGTGATTAGTTAAAGAAACACCACAGCCTTGTTACTATCACATCTTTTGAAACCTTTTTACATTACA-CAAAGATGGCCT--AAGAAATTAATTAAAATCTTGGACAATAACATAATCAGGGATATCTATATTTGCAGTCTTTTCTCTGTGCTTACATACATCTTTTATCTGTCAAGTACAGCAAATAGCTAATTAGCCCATTTTTAAGTGCTTCACTGCTTATGTTGGAGCTATAGTCGTGCCCTAGTGGGATGGTTTCCAGGAAACCTGATACGCATTCTTGTCTGAAAGAGTATGTGC---CTATTCGTAGGCTGTTAAAAAATTGAGAGAGATTAGAAAATACTCTTTGAAAAGAATTGGTTGCTTGTATTCTCAGAACACATCTAACTTGAGGAAGTTTTAAAGATGAAATGAGCCAAAATCTGGAGTCCCTGCATGTTTCTTACTCAGCAAAATTCTTGCCAATGGCAATAAGTGAGTTACTAAACATGGGTTTCAGGATATTGGGTAACATGTAAAC---AAAAGATTGGTTTCAATAAGAAGGTTATGACTCATCATGTTAGATTTTTGCAATCACTCACTC----ATTTTCTG----CTCAGGCAAAGCCCTAGTATAGTTGGAACTGAACTAATATGCTCTTCATTAAGACAAATGGC-------CATAAAAAGATTAT--CTGGTTAATGTGTTAC-ACCACTATGCATGGGTATTAAAGTAGTAAATCTGATACATTATCAAATCATCTTAATTTCACACAATGATTAAAAAATTCACTT----AGAGATTAAAG------TGATGCTTGGAGATTCC--GCTGCCTCCTCTTTCTGTGTTAAAATCTTCATGACAGAAAGG---CCTCATTGAGGGTTACTA-TAACACATAATGTCACATGTAGTCTCTTGTTGACCACAAAAATAACTCAAGGCGCCACTCTGCTGCAATTAGCAGCTGTAAGATTATGATGTTTTAACACAGGTGAAGCGAAAATTCCAAGC ..x.:.:..:x...::-...x:.:..:...x:.:x:.:x..:.:....:......x......:x:..:.:.x:.......x.....-...x..:.....x.xxxx..............x:.x.:x:.---...::.......::....:.:x.....:....x:.........xx:........:...........:x:::x.:.....x.xx:.........-.....x.....x....::-x......:.:.:--............x..:.:...........:::................:.................x.....:...........:-.............x....:............:xx.......x.....x.....:.::.::---------------.:..:x:...---.:......xx:...--------------...x.:.....x::::.---..:.x.:.x....x.:x:...:..------xx....-------......-..:....:x:..x.:.::..----------------.:.x..:...x...x....xx..--------------....x.::.------:...::..xx.x...xx.....---------------..xx..x::.xx:...:---...:x..x..-----...x:...x.---x....:...:.----.:.x:x.xx...-----.x.x..:..x.x..x..x:.:.:.xx:....----:...x...----.x:xx.x...:.x:...x..:::----------------....:..:.........x:...:-------x.x.....:...:.--xx.::...x.....:.-x:..:.xx...-------......:x..------x....:.:x....-------.:...-----:...x..x...x.::.....----..x:.:..x..------....x:x::..x..:x.--.:.:x.x.x.-x..xx:x....x..:.x.x.:x.x...x..:---:..x.:.x.x:.:.x.:.-...:x::x.x.:...:....x:....xx......:.:..............:.:...x:x....x......:......x..x...:....:...............x:::..:.x..x:... 16M1I69M1D41M3D93M1I18M1D12M2D85M1I60M15I10M3I14M14I17M3D24M6I6M7I6M1I20M16I23M14I9M6I22M15I17M3I10M5I10M3D11M4I12M5I31M4D8M4D23M16I23M7D14M2D16M1D11M7I10M6I13M7I5M5I20M4D11M6D17M2D10M1I31M3D18M1D122M 681/988 68.9% 1147/94230402 0.0% 206/988 20.9% 76106833 NA +24810 chr4 + 190214555 111224625 111224624 111225149 525 TTTTGGACCTCTTTTGGAATACATCTGTATGCATTGTGTCCAGTAATATTGAGAGTTGTACCTTCCATGATCCTTTGCCATTGCATGATGAAACGCTCTATTTATATTAAAATGAAGGTAGTCCTAGGGGAGACATAGAGCAGAATGAAACAACAAACAGAGCTTTAGAGACTGAATATGTGAAGTGACAGTGATGGCAGAATGGTAGCTCTAGTTACTGAGTGGCCCAGAGGACTTTAGAAAGACTTATAGCTCCAGCCGCAGTGCCTTGAACGTGGCAGCTCCCACAGGTTTAAGTAC------------------TCACAGTACAGCAGCTAATCAAATAATTTCTC-CTCTTGCGCATCTCGACTTGGTATGTCATTGTAATAATATGTAGCTGGCTGAGGGTCAGGGGATTTTTTTTTCCTCTTCTGTTAACCAAATGAAGCATTTTATCAAATGATCAAATTTCTTCAT--------------AGCAATATTGTGATTACAATGATCTGTTTACTCCAGGTAATGAGAG-GATAAGCCACGAAAATCACATTA chr4 - 94230402 35110609 35110608 35111149 59119254 59119253 59119794 541 TTTGAAACCTGCTCCTAAATTCATCTGTATGCATCATCTTCAGTAATATTGAGAGTTGTACCTTCCACGAGTCTTTGGCACTGTATGATGAAGCGCTCTATTTATATTAAAATGAAGAAGTTCCTAAGGGAGACATAGAACAGAATGAAACAACAAACAGAGCTTTAGAGACTGAATGCGTGAAGTGACAGTGACAGTGAAGTGGTAGCTCTTTTTACAGAGTGGCCCTAAGGACTGCAGAAAGACTTATAGCATGAGCCACAGTGGCTTGAACTTGGCAGCTCTTACAGGCTTAAGGACTTGCCATGAGAAGATATTTTACAATACAGAAGTTGATCAAATAATTTCTCAAGATTGCACATCTTGATTTGGGATGTCACTGACATAATACATTG------------CACGAGGCTTTGCT------ATTTATAAATTAAAGGAATTATTTTAACATCAAACCATATTTCTTCATTTAAATCAGCACACAACTATACTGCTATTTTTTTGATTTACTTAGTCAAGATAATAGCAGAGAAAAGACATAGACGTCACATTA ...x::....x:.::x:...x.............::.x.:...........................:..x:.....x..:..:........:........................:x:x.....:............:.....................................::...............::.:::.:..........xx....x.........x:......x:...............x:x....:.....x.......x.........::.....:.....x..------------------.:...:.....x..:.:...............-xxx....:.....:..:....x......:..xx......::.x.------------..x.:.::...x:.------x.:.:.x..::...x...x:......x..xxx:.:..x..........--------------.:.x...:..:x...x:xx....:.::...x..x..:....::x..-..x...x..:::.x:........ 300M18I32M1I44M12D14M6D48M14I46M1I23M 390/507 76.9% 541/94230402 0.0% 52/507 10.3% 76114016 NA +49658 chr4 + 190214555 111234682 111234681 111236633 1952 TTTTTTCTACTGCTATGA--ATTAGACGTTATAGAACCATACAAAAAGCGACCTGAT--------TCTTTAAAAG-CACCACAGTTAAGAAAATATCTACATCTTGCTTTTGTAAACATGCATTTTGCCTTTGCTTTTTGCATCATATTTAACAAAGGT----------CTATGATGTCTCAAAATTTTCTCTCTTAATAT-TGAAAAGTTAATTAGAAGTGGAGGAATGGGATGAAGCTTTTCTAATAACAAGTCAAATTCATTTGAACAGTAAAAATAATTGCTGTAAGAAA-TTAAGGTGCAAGCACATGCCTGCTGTAATTGGTGCGTACTTATTAGGAGCTCTTCTTTTGCAACCTCTCTCGGTATTTGGGGCCCATGATAATGTGAATACTTAAGGGAAAAGTGTGATTAGGGATGGTGTCGTTCATTCAGTAAACATTTCTTAG-TGTTTGATGTGACTGAACTGCGCGTCACATATGATTTTACACTTTTATCCTTTCAGGCAACTGACAGGTCTCTAATCTCCATCTCAGAACCTTCACTCAGCTTGAACTTTGGCTCATAAAGGTCATTTTTGAACCGCTTGGGACAAAGAGCCACGTCCATGAAATCCCACAGAGTCGATAGATGCAATAATAGCTTTAGGCACATTTTCTTAAGACCCAAGGGGAAAGACAATTTCAATAAATGTAAAACTATGCCATCTACAATCCACACGATATCTTAGCAAATCTCATAGGAATAAATCTTCTCTTTTCCTCCAGGCAAGAACCTCCTTAACAATAATGATGCAAGATCTTATTAAGAGTATAAGATACTAACTATGCCAA-AACAAAACGCAACACAC-ACAC------------ACACACACACACACACACACTAGCCTCAAACACAAAAAGAATATTC-----------------ATAATTTGATATATTG-----TACTTATCTTT----------------------CAATAGCTTGT--AAATCATGTTCTGAATATT-TAGACCTCAAATTGTGAA---AAGGGCTA--TAAATGTATGAAAATGGACCAAGTTAATAATTGGAAAA------TGACT-TAGGTATATCATTCAATTATG-------GAATGATTTAAATGTAGTTTCTTTTTTTCTTTCAAATCTTAGTCTCCAGCTTGTCTTAAAAAAGACAAAAAGCAAAAAACTCACAGGTTAGATATGTCAGGATAATTAACAGAAAGATCCTCAGCAGCAGATGTCTGAGATAAGTAGTAAAGGGCATTCTCTTCCCTTGACATGCCATCAAAGGGAAAACAACGACTATTTAAATGAAAGAAGTGAAAATTATATGGGTTTATGCTATAATT-TAAATAATTAACAAAGATATTTTAAAATCATGATTTAATCTAGAGAACAATTGAGACTT-CATGAC----------------AATTTTAATATTAATTTTCTTTGATTGCCACAAATTTTAGCATTGTCTTTGATTTTTTTCTTTCCTTGATAAATTTCATGATGCAAAGGAATGCTTCTTGAAAGTAATGTATCCCCTCCAGCAAAATATTTTACTCAATTTGCCTCAGAGAATTTTGCTGGCAAAAAAAAAAAAATAAAAATAAGAAAAAAATGC------TCCAGAAAAACTTCAAATTCAACAGCTTAAAAG-TATTTTTAAAAATAATCTTTTCAAATAAAATTGTTCAGTAGGTCAA-----------AATG-AATCTG-AAACTCAAATTTTTATTTT-----------------------AATGTTATCTTAATATTCTAATTGTGTGCCTTTCCCCTCTTTTTCATTTAT---TTCAAATA------GCGTGAATGCAACCAA-----------TCATAAATCCATCCTTCAAAATAGATATGTTAGGAAAGC---------------TTTCCTTATTTACTTTTAAAAGGTCTCCTGAATCGTAACTGGTGCCAACAGAGAAATTCTTCTAAAGGT-------AGTTTACTCTACTCTTAACCAGAAAGTGATGGAGGC--CAGTGCAAATAACATTC-------ACCTGATTC--TGTAAAACTCATAATAAGAAATAATGAAGCATCTGGCAGATAGGGAAAGGTCCAAGAAGAAACATTTTGAA chr4 - 94230402 35115345 35115344 35117402 59113001 59113000 59115058 2058 TTTTAACTGCTGCTTTAATCATTAGATATGATGTATCTGACCAGA-------CTGATGAGATTGGTCACTAAAGGTCACCAGATTAAGGAAATTGTTTGTACCATGTTATGAGGAA----------GGCTGTGCTTTTTGTGT------TAGCATACATGCTCCTGTTGCTGTTTTGTTTTGAAATTTATAATCTCTATTTCTCAGAAG--ACCCAGAAGAGAGATAAGGAGATACAG--TATGCAATGACAGGCCAAATTTGCTTCTTCACTATAAATAATCACAGGAAGAAAATTAAGGTGCAAAAACATGCCTGCTGTAATTGTTGCATACTTATTAGAAGCTTTCCTTTTCCATATTCTCTGGGTATTTGTTGTCCATGATAATGTGAATACTTAAGGGGAAAGTGTAATTAGCGACTGTGTAGTTCATTCAGTAAACATTTCTGAGCTGTTTGATGTGACTGAACCAAGCGTCACATATAATTTTACACTTTTATCCTACACGGCAACTGACAGGCCTCTAATCTCAGTCTCAGAGCTTTCACTCTGCTTGAACTTTGCTTCATAGAGGTCATTTTCCAACCACTTGGGAGCAGGAGCCACGTCCGTTAAACCCCACAGAGTCGATAGATGCGATAATAGCTTTAGGCACATTTTCTTAGAACTCAGGGGAAAAGACAATTTCAATAAATGTAAAGCTATACTACCTACGGTCTGCAGAATATGTAAGAGAATCTTGTAAGACCAAATCTTTATTTTACCTCCTGGTGAGAAACTCTTTAATAATAAC-ATGTATTTACTTGTTTTCAATAT------CCATGTTTGTTAAGAGCAAAATGTCACACACGATACTTCAGGAAAGGAATAAAGGGGAGAGAATGCATGAGGTGAAATGACCAGTAAAATATTCCCTCAGGTTTGGATATTACAAACTATTAAATTGTCTTATACATATTTCTACCCTCGGAGAAAGGCAGATGGTAATAGGCTGTGCACGTGATGGTCTGTCTGTCGTATACC---AAATATGAATGGAAGAGTTAGGTCAATGTA-----------CAAACTATTGGTAGGAGAAAAGTAGAGACTCTAAAAACATGCTGCTAGCATGCTAAATAGACTTGTGTACATAATGCTTTGATATATTTTACATCGTATAGATCACAGCTCATC------AAAAC----------AAGCTTCCAGGTTATATCTGTCAAGATAATTAACACAA--TTCCTCTGCAGGAGATGTCTGAGATAAGTAGGAAA-GACAGTCTCTTCCCTTGACATGGCATCAAAGGGAAAACAACTAATGTTAAAATAAAA-----------TGTGTGTTTTTTCAGTTTGATCATAGATGCCTAACATGAAAATT----AACCCTG-TTTACACAATAAAACAAGCAATTCCTGCATGGCTGTCAAACTTATTCTAAAACTGAAAATAAACTTTCCAGTTCTTTCAACATTTTTTGTATTGTCTTTGATTTT----TTTCCTTGATATATTT-GTGGTGCAAAGGAATAAATCTTGAAAGTAAAGTATCCCCTCCAGCAAAATATTTTACTGCATTTGCCTTGGAGAATTCTACTGCAGGAGAGAGAAAGGGAGAAAAAAAAAAGCCTTGCAGAGTATCTGGAGTGGCTTCAAATTCAATAGCCTATGAGATTTTCCTTTAAATGATCTTTCTAAATATAACAGTTCAATAGGTCAGTGGTCAATATCAATGTTATCTGCAAGCTGGAGCTATTAATTTCTGCAACACTGTTTTAGATGCCAAATGTTAACCTAATGTTTTA----------TACTCCATATTTCTCACCCATACGTTTAAATGAACATTATGCAAAAACTACGGAGGAAGCGGTGCTGATGCTCCCATATTTAAAAGGAAAATTGCTGCTAAATCACATTACAAAATCAATTTCATT-TTTTCCTTGAAAAGGTCCTTTGAGGAATGACCATCTTGAATGGAAGGATGTTTCTGAAGGTGCGGTGAAGATTTGTACA-TCTTGA--AAAAGGTGAGAGAGACAACACAACAAAGGATATTCTACAGTAATTTGAGTCTATGCAAAACTCCTAGTAAGACCTGAAAA----------ATGTATGGGAATGTCCACACAGTAAAAGATTGAA ....xx..:.....x.:.--......::.x..:x.x.::xx..:.-------.....--------..x:....:.-.....x.x.x.:....x.:.:.::.:.x..:.x.x:x:..----------.x..x.........::.------..:..x.x:.----------..:.xx...:.::......x:xx...:x..x.-.x.:...--.x::.....x.:::x..x.:...:x..--.x.x:...:...:.:......:::..xxx..x..x.......::.x.x......-...........:x..................x...:..........:....:.:.....x..xx:.....x........xx.:.........................:.......:.....x..:x....x.....................x..-..................::x...........:..................x:xx.............:..........x:.......:.:.......x............x:.....:..........:x....:.......xx.:...........:.x...:....................:..........................::..:..:...:........................:....:.:.:....::..::..x:....x.x..x:.....::..:..x:.......:x:...x.....x..::....x...:....:.....:-...:.xxxx...:..xxx.:...------.:.xx.x..::..-.:.....:.:x......-.:..------------.:.x.x:x:x:x:x.::..:x..x:xx..xx..x.:x.:.......-----------------.:..x:.:x..x....-----...x...:.:.----------------------:.....x:...--.x:.x...x....xx.:.:-..x...---..x.:....---...:.:..--.x......-----------...::..x.::.x...:..------x....-..::x.:..xx.x.x.x:...-------..x.x:.x..x..:xx.:..:xx.x.x.:..x..xxx:x...x::x.....::..------..:..----------..:..:x.......x..x.....:...........x..--x.....x....x...................x...-.:..x.................x..................x.x.:..x....:...-----------.:.:..xx...x::x.x.:..:-..:..:x:.....x::.x...----..:.x..-....xx.x.x.:.....x::.xx.:.-....:.----------------..x:.x..x..x..:....:xxxx:.x:..xx.x....x.:...............----...........x....-:..:...........:xx............x...........................xx........::.......:.:...xx::.:.:.:...::x.:...x..:...:xxx...------..::..:x::............:...:..x:..-.x..::.xx....:......::.....x..:x.....:.......:-----------....-x.....-..:..x:.::.x...x...-----------------------.......x.:....:..:..----------.x::..x.x...:...:::..---..:....:------::.::..x:.x..x:.-----------.x..:xx:....x:..x...:x.:.xx..:.:xx...x.---------------....x..-...x.:..x........:::...:xx:.:..::x:x:x..::..:::..x:....:.....-------..x..xx.x:.-....:.--.:..:....x:...:.--..xx:....x:.:....-------.::...x..--..:.......x..:.....xx.:.x:.----------.x:..x..:..x.....x:x..x..x.xx..... 18M2I25M7D5M8I10M1I40M10D17M6D10M10I32M1I7M2D27M2D54M1I156M1I341M1D23M6D13M1I17M1I4M12I46M17I16M5I11M22I11M2I19M1I6M3D9M3I8M2I8M11D19M6I5M1I21M7I55M6D5M10D38M2D35M1D57M11D22M1I21M4D7M1D26M1I6M16I56M4D16M1D118M6I33M1I46M11I4M1I6M1I19M23I20M10D21M3I8M6I16M11I39M15I7M1D61M7I11M1D6M2D16M2I17M7I9M2I27M10D34M 1308/1840 71.1% 2058/94230402 0.0% 330/1840 17.9% 76119337 NA +3248 chr4 + 190214555 111240967 111240966 111241055 89 GCATGGTTCACTGCAGTCTCGACTTCCCAGGCTCAAGCGATCCTCCTGCCTCAGCCTCTCAAGTAGCCGGGACTACAAGCCCATGCCTG chr4 - 94230402 18197116 18197115 18197204 76033199 76033198 76033287 89 GCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG ....x:.x:x..:...:.:x:.x:.:.::..:.....:.x.:.x.xx.x........:.........:..:......x.:x..:xx... 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 93043851 NA +3680 chr4 + 190214555 111253872 111253871 111253992 121 TTGTAAATTAAGTAGATTATTAGTCTCTCTAAAACTCATTTTCCTAACCTACATATATACATATATATATATATATATATATATATATAT----ATATATATACACACACACACACACACACACA chr4 - 94230402 8395740 8395739 8395862 85834541 85834540 85834663 123 TTAGAATTCAAGTGGA--ATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:x..x.:....:..--...x..x:x.x:.:..xxx.x..:..:.:x.:.::.:.:..::.:.::...x.:..:...x..:....:...----.:..xx...................x..... 16M2D72M4I31M 79/119 66.4% 123/94230402 0.0% 6/119 5.0% 102858132 87356423 +3153 chr4 + 190214555 111253921 111253920 111253988 68 TACATATATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..::.:.::.:.x.:..:...x..:....:...::x..:..xx...:.:.............x..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 102858126 87356429 +3725 chr4 + 190214555 111253921 111253920 111253995 75 TACATATATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATAA chr4 - 94230402 8395793 8395792 8395867 85834536 85834535 85834610 75 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA .::..:.:.:....x.:..:...x..:....:...::x..:..xx...:...............x.....x..:. 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 102858128 87356427 +3071 chr4 + 190214555 111253926 111253925 111253991 66 ATATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 96289107 93925448 +3224 chr4 + 190214555 111253928 111253927 111253992 65 ATACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:...x....:.x.:::.:.::.:.::.:...:......:.xx........::............ 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 96289109 93925446 +3819 chr4 + 190214555 111257134 111257133 111257213 80 CATTCACTGCAACCTTTGCCTTCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197120 18197119 18197199 76033204 76033203 76033283 80 CATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...x:x..:..:..:xx:x....:x..........x...x.xx.x........::...........:......x.:.... 80M 58/80 72.5% 80/94230402 0.0% 0/80 0.0% 93060014 NA +3001 chr4 + 190214555 111259434 111259433 111259486 53 ATATATATATATATATATATATATATATATACACACACACATCATATATGTAT chr4 - 94230402 3915970 3915969 3916022 90314381 90314380 90314433 53 ATATCTATCTGTATATATATAAATATATTTACACACACAAACTATACATTTGT ....x...x.:..........x......x..........x.::...:..x.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 107343464 82871091 +62319 chr4 + 190214555 111263795 111263794 111265673 1879 TTTGCTTCTAGGTTTTGAGAACAGTTCTG----TTTATCAATGTAAAATTATTTACATAATTACAGATCAAACCAATCAGTTACTACCTTGTAAGGCTAAAGGTTATGTCTAGCATAAGCAAGTAGCTCAG-ATGCTGCTC-TGCTGTTAATACCTATTCACTCTAGGGCTGCCG-CCCTATTCCCAGGGCTGATTGCCCTCTGTCCTGTG-GCTTCAAGTAATGTAAATTGTATCTTGTCCCTGGGTAATCGAGATCAGTGTTTTCTTGTCTGTCCACTCCCTGCCGATGCCCTCTCTGTGCTGCGATAATGGTTTTGGTGGGCAATCAAGGAGGATGCCTTCTTGACTCATCTCTCATAATAGATTGTCCTCCTCAGGCAAAATTGAATAACCCCCGACATGGCCTGGAGGCAGGCAATGAGAATTCAATAAGTCTGCAGGGTCAATGTCCTGTCATTTTTGGCAAGCAAGTAATTATTCTGCACTAACATTCAGTAATAGGAGAAGGAAACTGCTGTAGACACCTTCATCTTGATGCCCAGAAAAGTCACCTTAACAGGATTTTTCCTCTAATCGGCAATAATTCCTTCTCCTCTTCTGATGTGATTTGGTCCACTTTTTCATGTGAGTTGCATGTGTGGATTTTCTAGACTTTTTTTTTTAAACCTGCAGTATCTGTGGGAAAGTTTAACAACTTCACTGCC---TGTTTAATATTTTCCACTTTTATGGGCTGCAGTTGTGCTGTCTATTTGCTTTTACTGATTTGTGAAAGATTTATTATAAACCAAATACAGCTGTTCTTCTCTTTCATAAACTCAAACTATTTTGGC-AAACCTGTTTTCCACTAGGAAAATACATTCAATATTATTTCCCTTA-CCAGCTTTCCTACCATAAGCATTCAGCTG-TGCTTAGCGGTGCAGGGTAGGTCCCAGCGTGGTTGTGGATTCACTTAAAGAAATGAGAATGC-----ATTCAAAATAAACAGGCGGAAGAGAAGAAATGCCTTTTTTTTTTTTTTTGGCCTCCTGGT---------GGGATTCAGTGTTATCATGCACCAATCACAAGAGGGCAGAATTTTAATATCCCCCCCAAATAAA-----CCATCTGCAAATGCAAGCCA--CTGAAGTGTTCTGCTTTTGCATTTACATTTATGAAAAACACACGTGTAATTTAACTATGTAACCTTTACCTGAAACTAATATTATGATTAACCTTTTAATATTCTTAAAATAAGACTGCCATGTACCATGACTCCCTTCACCATATATCCGAACACATAAATATCCTTGTATTTATATTTAAAGAA-ACATATTCACTTAAATTAATCAGTTTCAACCATTCAGATTTAGATCTCTGA------CTTACGACATTT----ATTTAAAGAAATGTTGAATTACCA-GTTTCGAAGAAAGCAAAGTTTAGTACCATTTTAGTTATTTCTATGGCCACCTCTTAAAAAGCGATCTTTTAAAAATGCAAACAGCAAAAACAAAAACAATTAGAAAACAAAAGTGATTTCTAAACCCAATCTAAGTTGCTTTTCT---CTCCA---TTTCTCTCTGTGTAGAAACTATTGCTTTATTCATTGGAAGGTAC-CTTTATCTTCTCTCTCCTGAGATCAGTGTGCACAGCAAATAATGAAGAGGCTCGTATAAGAGCAGAATAAGCACTTTCCATGACTGATTGACGATTGATTATTGCTGGGATGTCTCCCCACGGTCACTCATCACTACGCTTTTCTGACAACCAAGCCCTATTTCCGACATGAAAAAGGTGTTTTGATCTGCATCAATTTGGCTTGTTAACTGTGACAAAACTCAAACTGATACCGATCATGTTCAGTTGTCGATGTTGATTTGGGTCTTGGATGTAGAAACAGTTCATAATCATA-TTAATACACTTT chr4 - 94230402 35123551 35123550 35125332 59105071 59105070 59106852 1782 TTTGGTTTTCCCTTTGGGGATCACTTGTGGGGTTTTGTCAATGTAAAAATATGCATCCAGCAGCAGATCAAGCCAATCAGCCTCCTCTGTGCCAGGC------------CGAGCACAAGCAATTAGC--AGCACGGTGTTCACGCCGCGAATGCTGGGGCGCGC---GGCTGGCGGCCCCATCCCC--GGCTGATTGCCCAGAG--CTGCGCGCTGCTCATAATGCAAATTGTGTCTGGTCCCTCGGCAATCGGGATCAGTGCTGCCTCGTCTGTCCACTCGCTGCTCGTGGCCCCTCTACGCTGCGATAATGGTTTTGGTGGGCAATCAGGGAAGATGCCTCCTTGACTCATCTCTCATAATAGATTGTCCTCCTCAGGCAAAATTGAATAACCCCCGACATGGCCCGGAGGCAAGCAGTACGAATTCAATAAGTCTGCAGGGTCAACGTCCTGTCATTTTTGGCAAGCAAGTAATTATTCTGCACTAACATTCAGTAATGGGAGTAGGAAACTGCTGGAGACACCTTCCTCC--ACAGCCAGAATAGACACCTTAATAGGATATGCC-------------TCATTCCAATGCCCCT-----TGCCTTCAGGTTCGC-TTTTCATGCACATTTCATATATGTATTCTGCAGAGGTTTTTT-----ACCAACAGCATCTGTGGGAAAGTTTAACAACTTCTCTGTCTGTTGTTTAATATTTTCCACTTTTATGGGTTACAGTTGTGCTGTCTATTTGCTTTTACTGATTTGTGAAAGATTTATTATAAACCAAATACAGCTGTTCTCCCCTTTCATAAACTGAAACTATTTTGGCAAAACCTATTTTCCACTATGAAAATAAAGTTTAAATTGCTTCCCTCACCCAGCTTTCCAAGCGTGAGCATCCAGTTGTTATTCAGTGGTGCAGAATATATGCCAGGGTGGTTGCAGGCTCACTTAAGGGAAAGAAAATGCCTATGCTTCAAAAATAAATTGCAGAA----------TTTTTTTATCTTTTTTTTACTCTTCCCGTCTTTTCCAGAGCACTTACTACTATTATCTGTGGATCTCaataattataaattataaatt------aaaatataaaatttCATCTGCAGATTCAAGCTATTTTTAAATTTTCAAC-ATTACATTTATGCCAAAGAACTGAACACCTTTTGTTTATGTATTTTACCTTTACCTTACACTAATATTATTTCCAGTTTTGTAGCATACGCAAA-----------------------TATTTTGGTCATGGAGCTTA------CAATAGCCAACTGCTTATTCTGAAAGGGCACAGAT----TTCACTGTATCAATTTCCACTGTCAAAATTTGGAAGACTGCAGGTGTCTTTTCATCTTTCCTAATCTGGTGAAGTTATAATTTTGCATTTTTTAAAGGAAGTAAGAAAGAGAAGTAT------------------------------AGAGATCCTTTGCTAATACCAAT-GCCTCAATATGAATTGTTTGATA-----------TTCTTCTCCTGTT----GCTGTTTTTCTAGAATCAAATGTGTTTTACTGCATATAAACTATTGCTTTATTCATTGGAAAAAAAGCTTTATCTTTTCTCTCTTGAGAACAGTTCACATGG--AGTAATGAAGATCCTTGTATTATGGCAGAATAAGCACTTTCTATGACTGATTGATGATTGATTATTGTAGGGCTGTCTCCCTGTAGCTGCTCATCACTGTGCTTTT-TGATGAGCAGCACTCATCCTCAACATAAGAAAGTTCTTTTGATCTCTACTGCTTTTGTGTACTAGCTGGGTCAAAACTTTGGCTGCTATTGCTTGAGTTCAGCTGCTAGTGTTCATTTAGAGC------ATAAAAACATCCTGTGCTAGTATTTGACACAATTT ....x..:.xxx...x.:..x..x..x..----...:...........x...x:.:x:.::x:........:........::x.:x.:x..:x....------------.x....:......x....--..-.:.x..:..-:..:.:x...:.:x:xx.:.x.---.....x..-...:..:...--............xxx.--...:.-...x.xx:.....:.......:...x......x..:.....:........:.x:..:............x....:x:..x..:....::.............................:...:.......:................................................................:.......:...:.:x.........................:....................................................:....x............x..........x..:--.::x......x..x........:.....x.x:.-------------.x.....xx:x..:..-----..:xx.:x...:.:.-........::x:..x...:.:..x...:.x:...xx......-----...x:...:.........................x...:.---..........................:.:....................................................................:.:............x.............-......:..........x.......x.x.:x.x...::......:.-..........x.x.:.:.....:...:..-.::.:..:.......::..x:.x....x.......::.::........:.:..x..:.....-----x.......xx..xxx..:...----------x::....x.:........:x:..:.:x..---------:.x.:.:.x.::...:..x:::x:...x...x.:xxxx:....x...xx.------x.....x.-----:........:..x.....:.--:.x..:.x...x:.-x..:......::::x.x...xx:x....x.x.x:....xx...x.x..........x.x...........xx::.:::..x..::..x.x:...-----------------------.x::..x::...:x.x.:x.------x....x..xxx.::....x:.x....::-...x..----..x.x.xx....:....x..::.:x.:....:..xxx...x------...x:x.:x...----..:.::x...:.xx.:.x..xx..-x...::...:...:..::xxx..x.x:..------------------------------..x....:...:xx...:.x..:-..xxx..:.x:..:x:..x..x.-----------....xxx..::x.----.:..:......---x..x.---.x.:.:x...::..x........................::x.x-.........:......:.....x....x::..::.--.:.........xx..:....x.x:.................:............:............:x...x........::::.:::.........::......-...::.x..:xx.::..:::.:....:.:....x.x.........x:.:::x...x.:x.::..:...x.x.......:x::...x..::.x.::x......:..::::....x....:.:x.------:..:.....x::::.:x.x:..-..:.:...x... 29M4I64M12D18M2D2M1I9M1I22M3D8M1I10M2D16M2D5M1I322M2D33M13D16M5D15M1D42M5D40M3I126M1I46M1I29M1I62M5I21M10D29M9I50M6D8M5I20M2I14M1D94M23D20M6D28M1I6M4D41M6I12M4I24M1I29M30D23M1D23M11D13M4D11M3I5M3I44M1I35M2D106M1D123M6D22M1I12M 1264/1727 73.2% 1782/94230402 0.0% 207/1727 12.0% 76140244 NA +24990 chr4 + 190214555 111282016 111282015 111282555 540 AAATATAGAGCCTTATTTATATGTGATAGCAACATCA------TAAATAGCTTGATGTATTGAAAA-CACTAAACTAAACATGTTACAGAAGAAGCTGGTGCCTTTCATTGGTATTATCTCCTTCAAGATGACAGGCAATCTCAGGAGGCCAGAGAATTCTTAGTTGTATGAGTTTGTGACTAATAGGTGGTTTGATGTGACAAGAGCTGGCCGTCTTGGGAAATTGAACTATCTTTATGCTCAATACCCTTTGTGTCTCATTCTT-TGTAGGTTATTGTTG-GAGGCCTTTGGGGACCTCTTTTACAGTTTGCATTCACAGAAAATATGAGATCAGCAAGAACTCTGTAGTTTTACTGTCATTATTGATCTGCTGCCATTCCATTCTGTAGCTAATTTGCTTGTTAGCAGTTATTCTAAAAGCTATTTATATTTTCAGTATAACCTATGCTGCATACTGGGCTTTATATTTTTCTGGATTAAGATAAAATAATACAA-CTTACCACCAAAAGACTGTGCTTTAGGCTAA-----------ATATTTTCTGATTTTCCATT chr4 - 94230402 35131686 35131685 35132231 59098172 59098171 59098717 546 AAATTTGCAAACTTATTTATATGTGTTAGCAACATCACCATCATAAATTGCTGAAGCCATCGAAAAACAATAAACGGAACCTGCTTCAAGAGGAACTAGTGCCTCTCATTGGTATTACCTCTTTCAAGATGACAGGAGACCTCAAGAGGCCCAAGAGTTCTTCGTTGTGTGAGTTTGTGATTAATAGATGGGTTGATGGAACGAGTGCTCACCACCTAGGGAAAATGAAGCATCTTTGAGCTCAATACCCTTTGTGCCTCATTCTTCTGTAGGTTATTGTTATGCAGCCTGTGGGGACCTCTTTTACAGTTTGCATTCACAGACAATACGCGATCAGCAAAATCTTTCTAGTTTTACTG---TTATTGATCTGCTGCCATTCTGCACTGTGGCTAATTTGCTTGTTAGCAGTAATTTTAAAAGGTAATTGGAGTTT---TATAGTC--TGCCTAACTCTCATATTTATTTCTTGCCTAATTAGAGT-------TTCAGTCTTAGCAGTGGAAGGGTTACTTTTTAGCTAATGAGGGACAATTTGCTTCCTGATTTTTCATT ....x.:x.:x..............x...........------.....x...x:.xx:..:.....-..x.....x:...x..:.x..::..:.:..:......:............:...:..............x:.:....:......x:...:.....x.....:...........:......:...x......x:..:..x...x:..::..x......x....x:......:x.................:.........-..............:-.x:....x................................x....:.x.........:.x..:.x...........---....................:::x....:.....................x...:......x..x..:x.x...---....::.--...:xx.:x..x:xx.....x.:..x.:x:....:::.-------.x..:-....x..x:::...:x.xxx:...x:.....-----------x.::..:........:.... 37M6I23M1I199M1I15M1I76M3D74M3D7M2D38M7D5M1I31M11I20M 408/525 77.7% 546/94230402 0.0% 36/525 6.9% 76150330 NA +3081 chr4 + 190214555 111362277 111362276 111362314 38 TTTTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTTTTC chr4 - 94230402 32236566 32236565 32236603 61993800 61993799 61993837 38 TTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTC .........................:..:.x....... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 79125711 NA +38425 chr4 + 190214555 111398755 111398754 111399329 575 GAACAACACTTTAATTCTACTGTGTCCCAGACCAGTAGATGAGCTCAATATGTATTCCTGTGCAGCAAACTCA--GGATTTTCAGAGCACCATAAAAGCTTTTTATTGTACACTCCAATGCTGTCATCCGCAGTTAGCTAACAAATATGATAGGTTTTTAATATAATCCACTCCGTCTTTGCCAGTGCTCCTTGTATGTTACATCATCTTTATACGGGCCAAGAGTTTGTTTTCCCCAGATGGCCTTCGTGAAGCTGCTGACAGCCCTTCTGACTGAGAAACTGTAGAACAGCAATCTTCCAATTCATTTAGTACTACTGACAAAGAGAGAGCTGTTGATATCCTGATGCAAAAGCACTCTATCAGGCATTACATAGTGTCTGTGTTCTCAGCATGTTTTGGGCGTGATAAGTCATAGCACATGCTTTTTGACATCTTTCTGCATTTCACTGCTGTGTAGAGTTTCCTGGAGTTGAAATCAGGGTGACAGA----ATGTAAAAAGCCAAGTGTGACATCATCAGCAACTGGTAGCAGTCACTGTATCATAAATAATACTTTGCAGACGTG--TCAAAAATTAA chr4 - 94230402 35147864 35147863 35148446 59081957 59081956 59082539 583 GAAAAATAACTGACTTCTGTTTCATTCCTGGCCAATAGATGAACTCAAGATGTACATAAGTGTGGTGAACCCAAGGGATTTTGAGAGCATCATAAAAGCATTTTATTGTGCACTCCAGTGCTGTCATCCGCAACTATCTAACAAATAAGAGAGGTTTTTAATATAATCCACCATGTCCCTGCCAGTGCTCCTTGCCTGTTACGTCATCTTGCTTTGGGCCAAGCATTTGTTTTCCCCAGATGGCTATCGCAAAGCTGCTGACAGCACTTCTGACTGAGAAGCTGTGGTGCAGCAATCTTCCAATTCATTTAGCACTACTGACAAAGGAAAAGCTGCTGATATCCTGATGCGAAAGCACTCTATCAGGCATTACATAGCATCTGTGTACTCAGCATGTTTGGGGCATGATAAGTCATAGCACATGCTTTTTGACATCTTCCTGCCTTTCACTGCAGTGTAGGATTTCTTGAAGTTGAAACTGAGGTGGCAGAAAAGATGTAAAAAGCCAAATGTGACATCATCAGCAACTGGTAGCAGTCGTGGGATCATAAATAATACTCTGTAGACTTGGATGAAAAATAAA ...x..:.x:.x.x....::.x::.:..x.:...:.......:.....x.....:x:xx...::.::...:..--.......x......:.........x.........:.......:..............::..x..........x..x....................:x:...::...............:x......:.......xx.x:........x:...................:x...::..............x..............:....:.x:.......................:.............::.:.....:..............:..........................::.......x............x....:.................................:....x.........x......::....:..:........::::....:....----..............:.............................::x.x...............:..:....x..--.x......x.. 73M2I416M4I75M2I11M 482/575 83.8% 583/94230402 0.0% 8/575 1.4% 76250891 NA +42169 chr4 + 190214555 111405732 111405731 111406367 636 ATCCAATATTTGCACTATTATTTGGACAGAGTTTTTTTGCTGTTCAGTATGCCATCTCGAAAATAAGTCTATTATTCCTGGGTGGTCACTGTAAATATAGCTTCAAGCATATAAAATATAAAAAGCATGCATGAAATATGCCAGTATATTAAATTAACATCTTGCAAAAAGCCCCTCTCCAAAATCCAGATGCTTATATTGCTTTTGACAGACTGTAGGCGGTAAAGTTTTAACTTTAAAGAAGGGGTTCTCTGTTTCTGTTTTCAAGTTAAAAATAATGAAAGGAAAACACACTGAAATTCCCACATTATTAAATAAAACATTTAAGTGGCCAAGGGCCAATCATTGTCACGCCATGAACAAATGCCTTACGGTAATATGTTCCATAACTGTTTGCTAAAAACTACCAATTTTAACACATTTGCACATGATTAGACACCATAAAAAGTTGCTTATTGAAGCCAGTGTCATAACACTGTTACTCATGCCCAAGGGGAGGGAAGCTTCAACGCAAACCTGAACAAGAAAGGTGGTGGGAAATAAGTTCCACGTTGTGAAAACAGATCATAAGTAGATTTGCCAAATGGCTGACTCCATT-CGATGGTCACAAGTTCATAACATCACCATCACAAGACT chr4 - 94230402 35150968 35150967 35151598 59078805 59078804 59079435 631 ACCTGAAATTCCCAATGTTACACGAACATCACCTTTTACATGT-AAGTTTTGAATTTTGAAAA---GTCTGTTGTTCCTGGGTGGTCACTGTAGAGATAGCTTCAAGCATACAAAATATAAAAAGTATGCATGAAATATGCCAGTATATTAAATTAACATCCTGCAAAAGCTCCCTTTTTAAAATCCAGATGCTTATATTGCTTTTGACAGACTCTAGGCGGTAAAGTTTTAACTTTAAAGAAGGGGCTTTCTGTTTCTGTTTTCAAGTTTAAAATAATGAAAGGAAAACACACTGAAATTCCCACATTATTAAATAAAACATTTAAGTGGCATGGAGCCAATCATTGTCACGCCATGAACAAATGCCTCACGGTAATATGTTCCATAACTGTTTGCTAAAAACTACCAATTTTAACACATTTGCACATGATTAGACACAATAAAAAGTTACTTATTGAAGCCAGTGTCACAGTAGTGCTACTCAGGCCCAGGGGGAGGGAAGCCTCCCTGCAGACCTGAATAAGAGAGGTGGTGTGAAATAGGTTCCATGCTGTGCAAACAGACCATGA--AGAGTCCCCAAGTAATCGGTTTTGTTCCTGTGGTCAGGAGTTCACAGCACTGCCACTGTGTGACT .:.::.x...:x..x.:...:x:.:...xx:::....xxx...-x...x.xxx..:.:.....---....:..:...................:.x...............:.............:...................................:.......:x:....:.::..................................x................................:.:....................x.............................................................xx:.:................................:.....................................................................x..........:...................:.::.x..:......x.....:............:..xx:...:.......:....:........x......:......:.:....x.......:...:.--...x.:x....:.::::.::.:::..-.x:......x:......:.:..:::...:::::x.... 43M1D19M3D504M2D26M1I38M 530/630 84.1% 631/94230402 0.0% 7/630 1.1% 76254764 NA +3210 chr4 + 190214555 111441717 111441716 111441766 50 AAAAAAACAAAACAAAACAAAACAAAACAAAACCAAAAACAACAGAACAG chr4 - 94230402 9913717 9913716 9913766 84316637 84316636 84316686 50 AGAAAAACAAAGTAAAGCAAAACAAACCGTCACCAAAAACAACAGACCAG .:.........::...:.........x.:xx...............x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 101528000 88686555 +27775 chr4 + 190214555 111450838 111450837 111451826 989 TTTTTGACAACTTGA-TTGGGGGGGAAAGGGTGGAAAATGGCCCTACTTAAGAAAAGTAAGCAAAGTATTGGCAGGCAGTGACTTTAAATTGCACATTAAACTAATCCAGGGCTATGCCTTAATAAAGGTGAGGGCTGGGAATTCTTATGGATTTTCTAGCTCATTGCTGGGACAACATAGAAAGGCAATAAATGTTCTATTACTTACACAAGCTGCTAGTTTTCAGAAAATTAGTCACCAGTGACCTTTTACCCTTTGTCTTGCTTTCCTCCTCAGTCACTGCACCTGAACTGAATCAAATGCAG-ACCAGACCACAGAGAAGTT--TCTGGGCTAACCTCCTACAAATTGAAATAACTGGG--------TTTTGGTATA--ATCAATAAAATGTATCTATTAGGAAAAATATAATTTAATACATTTATTTTACCAGATACAAAAGG-----------------------------------CTACATTCCCA-----AGTTGTTG-TTTTAAGTGAAATAAATTTTATCTTACTTCAAACAAACACA----------TCTCACTTCAAA---CAAGTTGAATATTTAAATGACATTCCATTGAAAGTTCTTTATTTTTACACAAAAACGACAAT----AATACAATGTTTTTTCTGTTAGCCCTTGCCTA--AATGCAGGACCATGAGTGTGTGGGTAATGG------------TGGGAGAAGCATGAAGTGGCAGAGGCTAGAGTCTCAGGGTTGATAGTGAAGA-----GGAACAGAAAGGGAGAGAAGTTATGTGATATGGGGCAT-CCAGTCCTTATATTGAATTATATTGATTAGTTTTCCAGTTAGCAGGGAGACCTCCTTCTGACCCTATTTTCAGGGTCACTAGATCATAATGCAATCTCACCAAGAGGCTGGCATTCCTCCCCATATTGCTTTCTGAGGAAAGTATGGACCTGAAAATCGCC-----CATTTAAAGCTTTCTCT--TTTTTTCCTCCTTTT---------------------------GCTGGATTCTACCTAACAAATGCATATATAAATTGCATATACAGTGTAATAACACATGTTGCAATGGACAGAAGAT chr4 - 94230402 35161771 35161770 35162854 59067549 59067548 59068632 1084 TTCTTGGCGACTTAAATTGGGAAGTAACTAGGAGAAAATGGCTCTCTTTCAGAAAAGTAAGCAAAGGAGGTACAGGCAGTGACTTTAAATTGGACATTAAACTAATCCAGGGCTATACTTTAATAAAGGCTAGTGCTGGGAATTCTTATGGATTTTCTAGCTCATTGCTGGGATGACAGAGAAATACAATAAATGTTCTATTACTTACACAAGCTGCTGGTTTTCAGAAAATTAGTCACCAGTGACCTTTTACCCTTTGTCTTGCTCTCTTTCTCAGTAAAAGTACCTGATCAGAATCAAATGCAGCATTGGTTTATGATGGCATTCCTCCAGGC-AGCATCGGGCTACTTGCAATCACTGTGAGTAAGACTCTTAGTGTAGCATCCAACCATCTTATTTTTC----------TCATTGTGTATCTGTAATATTGGGGATGCAGAGGGGAGAAAGGGAGGGAGAGGGGAGAAAAGGAAGAAAATAATTTTTCCATCATTGGTTGTTGATTTTAACTGTAGaaaaaaaaaaaaaagaaaaaaaaGGCACAATTCTACATTTCTTACTGAAGAATGAAAGCCCAAACTGTAGAAGATAACCAATC--AAGCTGCTTGCTCAGAATTAAAATCTGAAATCCAGGATATGG----CTTGGTGATATCCCCAGCCTCATAATGCATAGAGAGTTTTGTTTGGTTGATGTTTTTTCTTTTCCTG-----AGTATCAAAACACAATGTTTATATTCCC------TACAATGAGGCACGCTGTCACTGTGGGGGAGGGGA-CTATATTACTTGGTGTCTACCAGACCTTTTGTAGAATTATATTGATTAGTTTTCCAGTTAGCAGTGAGACCTCCTTCTGACCCTATTTTCAGGGTCAGTAGATCATAATGCAGAAGCACTAAGAGACCAGCATCCCTCCCCATATTACTTTTTGAAGAGTGTATGGACCAGAAAATCATTTtatatatataaatatatttgtaatgtatatatacgtataatgtatatGCACACAAAAAGTGTGGGGCTGTATTCTGCTCTTTAAATGCAGATGTAAGGTGCATGTCAAATATAATA--ACATTTTGCTGTGGAAAGGAAAT ..:...:.:....:.-.....::.x..xx:.x:.........:..x:..x................x.xxx:....................x.......................:.:..........:x..x.......................................::...x.....x:................................:...............................................:..:.:......x.xx.:......x.x.............-.:::.x::.:::x.:x:..--..::...-.:.x..xx:.x.x...x...x....x.--------.:..:..:..--...x.xxx.x:x...:.x.:----------.x...xx:..:x.x..x.x.xxx:...:..:.:..-----------------------------------:x.:x..:...-----:.......-......x..x.:x...xxxx.xxxx.xxxx...x.::....----------...:...xx.:.---x...::x..xx.x..:.x..:.x:.x..:--...:.x:..::.:xx.xx:....x.x:x...----:...:::----:..xx..x..x...:x....x--......x::xx.xxxx...x...x.:...x------------..-----..:..x..:xx:..:x.x:..x.x..:.------x.:.:...:.x-----.xx..x.x::.....:.:.-:...:.x.:x...x.:x.-....x....x.:.x...............................x................................x..............:xxx...:.....:.::....:............:....:...:..:x.........x.......:::-----:..x....xx.x.:.x.--.x.x.x:x.x.x.x.---------------------------....x.....:.::xx:.......x..:...:x.....:.xx.:.:.....--....x....x:....x..:.:.. 15M1I290M1I19M2I7M1D27M8I10M2I20M10D35M35I11M5I8M1I41M10I12M3I29M2D31M4I7M4D21M2I30M12I2M5D28M6D11M5I19M1D18M1I161M5I17M2I15M27I51M2D23M 684/958 71.4% 1084/94230402 0.0% 157/958 16.4% 76289067 NA +3814 chr4 + 190214555 111452585 111452584 111452670 86 TTCTTCTCACTATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATACACACACACACA chr4 - 94230402 8395777 8395776 8395862 85834541 85834540 85834626 86 TTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...::.xx:.:..:.:.:...:.:.::...x.:..:...x..:....:...:.x:...:xx.:.........:.......x..... 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 103056808 87157747 +3226 chr4 + 190214555 111452595 111452594 111452656 62 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.:..:...x..:....:...::x..:..xx...:...............x..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 103056794 87157761 +3286 chr4 + 190214555 111452595 111452594 111452658 64 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.::...x.:..:...x..:....:...::x..:..xx...................x...:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 103056796 87157759 +3353 chr4 + 190214555 111452595 111452594 111452664 70 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:.::...x.:..:...x..:....:...::x..:.:xx.:...............:.x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 103056802 87157753 +3544 chr4 + 190214555 111452595 111452594 111452666 72 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:...:.:.::...x.:..:...x..:....:...::x....:xx.:.............:...x..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 103056804 87157751 +3557 chr4 + 190214555 111452595 111452594 111452662 68 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 103056800 87157755 +3140 chr4 + 190214555 111452596 111452595 111452662 67 ATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACATACACA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x..:x.:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 103056792 87157763 +30128 chr4 + 190214555 111464162 111464161 111464758 597 CTTTATTTTCCCTACAGGTTCTTAAAACTCAGAAAGGGTGAAATAAAT--ATATTTCTTTCATGAGTCAGATATTTATGACTTAAAGACTGTAGTTAAGGATTGTGTTAATGCTTCCTTCACCCAAGTGACCTGAACCTTTTAGTAAATTCTGTCCCCATATTAGTTTTCATAAGTCAGGAAACATTTTCCATATGTCATGAAGCATTATCCAAAGGGAGTTCACAGCCACAGCGCTCATACTTTATCACGGTCACGTTGACTGAAATGAAAGCTCTTCTCAGTGATAGCACCCATCTGAGAGGTCAGAGAAAAGCATTTTTGGCACACTATTGTTCTCTCATTGGGTC-AGCTGCCTCCTTGGACTGAAATTGTTTCACAATCTTTATTAAAA-TTATTATAAAAGAACAGCTGAAAAAATAAA---------------GAATCTTATTTAGTGTCATCAAAGAAAAATTATCTGTCCCAGAGCAATATAATGCAATTTAACAGCCAAAACGAACATCTAGAAATAAGCAGAGGCATTAAAAATTGCTGAGGACCACA-GAGTGCATTACTTTCAATAAACTTAAAAAGCAGCAAAGAA---AGAAAAAAGAACGGAGA chr4 - 94230402 35166115 35166114 35166733 59063670 59063669 59064288 619 CTTTATTAACACTATAGATTTTTCAAACACAGAGGGGCTGTAAGAATTGCATATACATTTCATTAGTAGGGAATTTATGGCTACAAGATTGCACTTAAGGTTTGTGCTAACATTTTATGCAGCCTTTTGACCCAATCCCTTCACTATATTCTGCCCCAATATTATTTTTCATAAGTCAGGAAACATTTTCCATATGTTTTGCAGCATTATCCAAAGGGAGTTTGCAGCTGTACTGCTCATACTTTATCATGTTCATACTGACTGAAGTGCAGACCCCTCCTAGTGACAGTACCCATCTGAAAGATCATAACAACGCATTTTTGGCACATTATTGTTCTCCTTTTGTGTCAAGCCTCCCCCACAGAACAAAATTGTTTCACAGTTTTTATTAAAATTTACTATAAATGAACAGCTGAAAAAATAAACAGCAAAGTCTGTGTGTATCTTATTTACTGTCATCACAAAAAGAATATCTGTGCTGGAACATTATAACATAACCTAACAGCCAAAACTAACTTACAGAAATAAGCAGAGACATTAGAGA-GGTTGAAGGCCACAGGAGTTCATTATTTTCAGTAAGCTTAAAAGGCAACAAAGGGGGTGGAAGAAGGAAAGGGAA .......xx.x...:..:..:..x....x....::..x..x..x..x.--....x:x......x...x:.:x.......:..xx....:..:.x......x.....:...:::..:x.x..x..xxx.....::.x..:..:.x..x......:...x......x................................:x..x....................::....:::.x:...............:.x...:::........:..x.::.:.:..::.....:..:..........:..:...x.:x..x..............:..........::x...x...-...:x..:..x::..x::.............:.:..........-...:......x...................---------------.x..........x........x.:...:.x.......x.::..:..x.....:::..::.............x...x.x:..............:.....:.:.-x.:...:.:.....-....x.....:.....:...:.......:...:.....::---:...:..:...x..::. 48M2I299M1I44M1I30M15I104M1D14M1I40M3I17M 456/596 76.5% 619/94230402 0.0% 24/596 4.0% 76298047 NA +3219 chr4 + 190214555 111471315 111471314 111471420 106 TTTTGGGAAACTACCATTGGA----------ATATGATCT-ATCTATCGAAATATATAT----ATATGTATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATAT chr4 - 94230402 57691330 57691329 57691450 36538953 36538952 36539073 121 TTTTGGAAAGGTCCGATTAGATGAAAAGCAAATAGGATTTTATTCATCGCTATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATAT ......:..:x.x.x...:..----------...x...:.-..::....xx...:x.::----:..x..::....:..:x.......:..:x..........:..x....:x...x..... 21M10I9M1I18M4I58M 75/106 70.8% 121/94230402 0.0% 15/106 14.2% 53779985 NA +3238 chr4 + 190214555 111471342 111471341 111471438 97 TCTATCTATCGAAATATATATATATGT---ATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATA---AAGTTAAAA chr4 - 94230402 35554931 35554930 35555033 58675370 58675369 58675472 103 TCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAA ...:...x.xx..x.x..x:....x.:---.....:x..x.........::::.:..x............::...:.x.x....:..x.x.---.....x... 27M3I61M3I9M 69/97 71.1% 103/94230402 0.0% 6/97 6.2% 75916411 NA +3066 chr4 + 190214555 111471350 111471349 111471403 54 TCGAAATATATATATATGTATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATA chr4 - 94230402 4406418 4406417 4406471 89823932 89823931 89823985 54 TCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..::....::.......:xx....x..................:.x::.:.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 107064932 83149623 +3048 chr4 + 190214555 111471356 111471355 111471406 51 TATATATATATGTATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x.:.:....:..........:....x.x........:....... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 63381859 NA +3301 chr4 + 190214555 111471358 111471357 111471408 51 TATATATATGTATATACGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x.........::........:....x.x................ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 63381861 NA +3036 chr4 + 190214555 111471380 111471379 111471419 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 21650098 NA +3308 chr4 + 190214555 111471384 111471383 111471443 60 TGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATAAAGTTAAAACCAAG chr4 - 94230402 52579775 52579774 52579834 41650569 41650568 41650628 60 TACGTGTGTGTGTGTATATATATATATATATGTTTAATGAAATGTAAGGCTAAAACAAGG .::............:...............:.x..xxx.x..:...:.:......x.:. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 58891609 NA +3262 chr4 + 190214555 111482655 111482654 111482708 54 AGAGCGAAATTCCATTAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAA--AGAAAGA chr4 - 94230402 32280598 32280597 32280653 61949750 61949749 61949805 56 AAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGA .:..::...x....:.........................::...x.--:...... 47M2I7M 45/54 83.3% 56/94230402 0.0% 2/54 3.7% 79202057 NA +3085 chr4 + 190214555 111489939 111489938 111490005 67 ATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAACCATTAAAAAAAAAAAGAAAAAAAAAAA chr4 - 94230402 49177699 49177698 49177765 45052638 45052637 45052704 67 ATATATTCTGAAACTGCTCATATGATTAAAAAAAAAAAACATCTGGGAAAAAAGAAAGAAAAAAAAA ..:..::..:.....xxxx:...:..x.............xx:.:::......:.:.:......... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 62312240 NA +32447 chr4 + 190214555 111498935 111498934 111499540 606 CCAACATGTTTGTTTTACAAATTAACATTAAATCTTCAAATAACAATAGGTTGGTGTGATTTTCTGTGAAGCAAACATGAAGCTCTAAGTGTTTAACCATGTTAAGGGCTGCTTTTC-TATTTACATAATGATATATCATGTTTATCTTATTCACACTCTAAAAACATTAGTAACCATTCATAAATGGAGCTCTGATAAAAGAATACTTCATTTCAGAATCACTAGTCTATGTTAATACCATTTTGGTCAGGGTCTTGTTATAGCTGTTAGGATTTCAACCCCTGTAGGTCAGAGAAAGAAGATAGGAAAATCCTTAATAAAATGTTGTTAGAAGCTACAGGTGGGAAATAAAGAAGCTCTTGCGACCTATAATCTTATTCCCTCATAAAGTCACCAAGAGAGCACAGCAGCTTCTGCAGTTGAAATTAGACAACACACTAGTGGCTTTTCAATCTTAACTTTTACAGTTCGATGTTATCATTTTCAGTGAAGAACAAATGAAGGATACAGC-AGCACTGCCAAGATGCTCTCT--CTGGGTTTAATCAGTCCACTCAACCACATGAGGTAACTCTGCCTTAA---CAGTATTTTATTCCCATTTATAAACAA chr4 - 94230402 35176361 35176360 35176966 59053437 59053436 59054042 606 CCCAAGTGTTTGTTCTGCAAATGAGCGCTAAACCTTCAAAGAACATC---TTAGTGTGATTTTA-GACAAATAAGCATAATGCTTTAGGTGTTTAACTGCATTAAATACCGTTTTTCCTGTTTACATAATGATATGGTTTGTTTATCTTACAAGTGTTGTAAAAATATTAGTTAGCAGTCATAAATATAGTCCTGATAAAACGATACTACTTTCCAGAACTGTTAATCTGTGTTAATGCTGCTTCAGTACAGACCCTGTAACAGCTGTTAGAATTTTGTCCCCTGTAGGTCAGAGAGAGAAGATGGGAAAATCCTTAATAAAATGTTGTTAGAAGCTACAGGTGGGAAATAAAGAAGCTCTTGTGACCTGTAATCTTATTCCCTCATAAAGTCAC--AGAGTGCACAGCAGCTTCTGTGGCTGAAATTAGACAACACGCTAGCGGCTTTTCAATCTCAACTTTTGCAGTTCAGTTATATCATTTTCAGTGAAGAACAAATGAAGGATACAGCAAGCACTGCCCCTGACCTTCCTTGCTGTTTTTAATAAGCACATTCAACAGCATGAGCT-TCTCTGTCTTAAATGAATTACTATATATCCATGTATTGAAAA ..x.x:........:.:.....x.:.::....:.......x....x:---..:..........x-.xx..::..:...:.x...:..:.........::::....:x:.:.:.....-.:...............:x:x...........:xx::::.x......:......x.x..x........:x..::.........x:.....x.x..:.....::::..:...:.......:.:::..::..xx:.::.:...x.:.........:....::x.................:.......:..........................................................:.....:.........................--....x...............::.:................:....:.............:.......:......::.xx....................................-.........xxx:xx..::..--...xx......x..:x..:.....x:......x.-x.....:.....---x.x..:.x...x:....x...x:.x.. 47M3D14M1D52M1I277M2D115M1I21M2I34M1D12M3I27M 471/599 78.6% 606/94230402 0.0% 14/599 2.3% 76322574 NA +76832 chr4 + 190214555 111500597 111500596 111501678 1082 GCAATTTTCATTTATT-----TACCAT-GTATAGGACAACTTGTTTAACGAAATATTTGGCACTGTGAGCAGTTTACT-TGACAAATTCTGTCAAATATTTGCTTTCTGAAATCTCGAGAATTGGTTGAATATAATTGT--------ACTTA-----ATGTTTGCAAAATAAATAAATATGGGACTAAGGACGTTCTATCATTAATTTGTCAGAAA---AGAGAGTTGTCATTTCTGAAAATTTAATGTCATTGAAGCTCTATTTCCAATAGCA-AAGGAGCACTATTGCTAATAGACTTCAGAGCTTGAAATAAATAAATCTTTGGAATCCTGTTGCATCTCTTGGGGTGTGACATTTGACAGTCTTTTATAGCACAGAACGAAACAAGTTTGTGAGCTGGAATTCAATTGTGGCGTATTGATTCCTTGCATCAGTCATTATTCCCTGCTGATTGACAGGTGAAAATTGGTTACGTTAAGTATTTCATATGTTATATTGGCTGACATTTGCTTGCCTGCTCTTGTGTCAATATTGTTGTAAAGATCTCCAGCTTTATGAGATAGCAATAGACACTGACTGTGGCTTTTGTGTGATGTTCCAGTGTTTTTCCTGACATAATTTAAGACATATTAAAAACCAGCAGCATCTTCCCTCTTGAGAAGCTTAATGCCAATATTATTGTCTTCCAGGGGAAGATCATGTATGCTCATAATCGGGTGCTAATTTCCACCAGTACGCTCATGTTTAGGCATTAGGCACTATAACTGTAAAATTGAGCCTTCTTGATTGATTCATGTCAAGCCTCATCTCGGCTCCTGCAGGGGAAGTCATCCGGCTGACCCTTTTTACACTAAAAGAAGAGATTTGTGTTCCTTTCTTTCACCTGGAACCATCAAATTGACTGAATAATCTGTAATACATTAGTGCTGACATTTGTTAGG-GAGAATTAAACAAGACACAGTAATCATTCCCCAGAATAAAAATTGTGTTTGATTTCCAGCAGAGTTCTATTAAAGGGAGGACAGAA-TCTGTCTCTTCCAAGGTGGAAAATCGTGAATATTCCCTGCATTAATGAACCAAGTTAACACTTTAATTGCTTATAGA chr4 - 94230402 35177658 35177657 35178748 59051655 59051654 59052745 1091 GTAATCTTCTCTTATTATTTTTATCAGAGTACGAAACAACTTGTTTAA--AAATACTCAGT--------CAATGCACTATGGAAAA--CAATCAAATATTTACCGCTTGAAAGC-CATAATTTGTTTAAATATAATTATGAGCAATTACTTAGTAAAATGATAGAGGAGTGCTGAAATATGATAT--AGAATG--ATATAATTAATTGGTTCCAGATGCAATGAGTTGTCATTTCTGAAAATTTAATGTCATCAAGGCTCTTTTTCCAATAGCACAAGGAGCACTATTGCTAATAGACTTCAGAGCTTGAAATAAATAAATCTTTGGAATCCTGTTGCATCTCTTGGGGTGTGACATTTGACAGTCTTTTATAGCGCAGAACGAAACAAGTTTGTGAGCTGGAATTCAATTGTGGTGTATTGATTCCTTGCATCAGTCATTATTCCCTGCTGATTGACAGCTGAAAATTGGTTACGTTAAGTATTTCATATGTTATATTGGCTGACATTTGCTTGCCTGCTCCTGTGTCAATATTGTTGTAAAGATCTCCAGCTCTATGAGATAGCAATATACACTGACTGTGGCTTTTGTGTGATGTTCCAGTGTTTTTCCTGACATAATTTAAGACATATTAAAAACCAGCAGCATCTTCCCTCTTGAGAAGCTTAATGCCAATATTATTGTCTTCCAAGGGAAGATCATGTATGCTCATAATCGGGTGCTAATTTCCACCCATACGCTCATGTTTAGGCATTAGGCACTATAACTGTAAAATTGAGCCTGCTTGATTGATTCATGTCAAGCCTCATCTCAGCTCCTGCAGTGGAAGTCATCCAGCTGACCCTTTTTACACTAAAAGAAGAGATTTGTGTTCCTTTCTTTCACCTGGAACCATCAAATTGACTGAATAATCTGTAATACATTAGTGCTGACATTTGTTAGGCAAGAATTAAACAAGACACAGTAATCATTCCCCTGAATAAAAATTGTGTTTGATTTCCAGCCGAGTTCTATTAAAAGGACGGCAGAGCCCCATCTCCTCCAAAATGGGAAACAGTGAATATTTTCTGTGCTAATGAACTGAATTAACACTTTAATGACAGATGGA .:...:...x:.....-----..:..x-...::::.............--.....:.::.:--------..:.x:...-..:x...--.x:..........:.:x::.....x.-.:x:.x...x..:.........:.--------.....-----...x.x.x::.:.:xxx.......:x.:--..:.:.--x...x.......x..:xx.:.---.:x..............................::.:.....x............-....................................................................................................:.......................................:............................................x.............................................................:...............................:...............x.......................................................................................................................:..........................................x:...............................................x.............................:..........x...........:...........................................................................................................-:...............................x...........................x.............:...x.:....:-:.::....:.....::...:...:x.........::...:::........::.:.............x:.xx..:.. 16M5I6M1I20M2D11M8D9M1I7M2D26M1D24M8I5M5I28M2D6M2D21M3I55M1I668M1I86M1I77M 961/1065 90.2% 1091/94230402 0.0% 43/1065 4.0% 76322939 NA +64165 chr4 + 190214555 111519537 111519536 111521448 1912 TTTTCAACAAATGAATCTACAGCATTAACTCACAAAGCAAAAT---------ATATTATTTGGTGTTTTGGCATTTCATTATTACTCCTGAGAAAAGCTC-AGAAAACTGACACAACTGCATGGTGCTGGTTACACTTCGTTCTTATGAGAACAGAA-ATATGCTT-------TTTGTTTTTACATTTTCTGAGTTGTCTTGGGAGCAAAACTGCCTCCAGCTACAAATGGGCTTAGTTGCCCACGTCCATCTTGCGGGTGTCACCTGTTAAGGTGAAGAGTCTGGAATAGCCCAGACACATTATGTATGGGTGGCCTTTTGTTTACCACAGACAAAGCCCAAATCCTGGGGATTACTTGAAGATATCATATAACACACAAGATGGAGTTACTATTATTCTCCTCTAAGACATATAGTGTTTCCCCTGGGCAGAGGAAAGAACACATAGCCAATCACATGAAGGCAGAACCCATTAAAGATTTACGCAAGCCCGAATTACTTGGCTTTAAACTATTTTTTTTCCTTTTTCTCTCTCTTTTTTTCTTTATTAGGAGAGGCG-TCCCTTCCTGAACAGCAAAGCTGATGTAGATAGTATCACTAGTAATCCTTGGCTTAAGCACAGAGCTTCTAAATGGCTTGAATTAGGCTGGAAGATGGGGCTGTTTGATTTCCTTTCC-----------TTTTTGTTTCTGTTTTTAAGGCTCTGTCACCAAATGTCCCACTAAACTAGCATTTATGTGGGCTTGGGACCTCTGTGTGTAAGTTTCCTTTTAAGCA-----TAGTCAATGAAATAGCTCTGAAGCTGTTGAACTGTGTAAATGTTATATTAACATTTTCTCTCGCAATTATAGACATTTACATGGTCTTGTTGAAATAGCACTTTCAGAGGGAGGAAAAAAATACCAGAAGTGAAGGTACACAGTGAAATGAAAAAGCAGCAGTGTGCTCTATTTATTTAGTTTCTGAAATAAATCATTTCGACTTTTAATTTACACTTCTCTAGGATGGTGGTTAAGAATAGACAAACAAAGGATACTGACAGAAATAATTTCATCTTGTTCCTTTGTTACATTAGATCATTTAATTTCCACATTTCATTTGGTTTGCATATGGAGATTTGACCAATGCACCTTGTTCTTTAACTTTGCTAACTAATAACAAGGA----CTCAGGAAGCTCAT-TCTAAAGACCTAAGACTCATGGATGATGATTCAAAAATTATGAGACTACAAGTAGTTGTCCAGTTATAAGGAGAAAGGCAAATAGAGTAAATTAGACATTAATCCAAAGTATTCCCAACTATCCATGTCTCTAACAGG--AACCATAATGTGCT---TTCAAATTGAAAAGTGATTTGAATCATTCCAATAACTACCACCTGTGTCACTGCATGCAGTCTGATGAGCAGTCTGATGCTGGAGAAAATATAATCAC----TAAGATCCTAAG------GAAATATTT--TAGGAGTCTAATTTTGGTCC----CTTTCCACACACAAAACAATCATTTACTGATGCACAGTGT----------------TTGTAAAATGCTTGAAATATTTTTCTCCTTTCACATTGATACTACTAAATTTAGTT---TA-TCTAAAGATCAATACT---------AGTA-ACCTTAACAT----TAGTTATTTTCATGGGGTTTTTTGCTCTTGA-----TAGACTTCTATTCAATG----------------GTAGACTTGTT----TTATCA-TGGATAAAAATGTATATGTTTTTTATCTTTGCACCAATTCAAAGCAAAGAACATATTTGTGATGGAACCGTTGCTCACCAACTGTGATCTCTCCACTA-GTCTGACAGTTGCTTTCTTTCCAGCAGGACTCATATGCAAAATGGACAGA--CATTGATCCTCAACGCAGCATCACATTTTGTTATACAC---ATTTCAGAAGCTGATAGC----AGTAATCTTCTATAAGTCTCTGTCTACACATCATTGCACTTTTACAGTTAAGCTTTAAAAACTACATT chr4 - 94230402 35185906 35185905 35187828 59042575 59042574 59044497 1923 TTCTTAAAAAAAGAA------ACAATAACACTCAAGACAGAATGGCATGAAAACACATTTTAGGGCTTTG------TAGCATAATTTTTAAATAGATCTCTGGAAAATTGGGACAACTGCAAGGTGCAAATAATGTTTTGCTCTTACAAGGAGGGAATATTTGCCTGTTTTATTTTTTTTTCTCCATTTCTAAATTGCCATGAAAGCAAACTTGCCTCCAGCAACTGACTGGCTAAGCATCCTCCGTCTATCTCCTGAGTGTCACCTGCTAAGGTGAGGAGTCTGAAAATGCCCGGACACATTATGTATGGGTGGCCTTTTGTTTATGACAGACAAAGGCAAAATCCTCTGGATTACTGGAAGATATCGTATAACACACAAGATGGAGTTACTATTATTCTTTTCTAAGACATATTGTGTTTCCCTTGGGCAGAGAAAAA---GTGCAGCCAATCCTGGGAGGGTAGCTCCTATTAAAGATTTATGCAAGCCTGAATTATTTGGCTTTAAA------------------------CTTTTTTCTTTTAATAAGAGGGATGCTTTCTTTAGGTGCAGCACA-CTGAAGTAGATGGTATCACTGGTAATCCTTGGCTTAGCCGCAGAGCTTCTAAATGGTTTGAATTAAG-TAAAAGATGAGACTGTGTGGTTCCTTCCTCCCACCACCTTTTTTTTGTTTCTGAATTTAAGGTTTCACTGCAAAATTTCCCATTGAAATAGCAATTG-ATGGGTTTTTGCCCTCTCTGCGTAAGTCATCTTTTAGGCAGTATTCATTCAGTGAAACAGATTTGAAGGTGTTGAACTGTGTAAATGTTATATTAACATTTTCTTTTGCAATTATAGACATTTACTTGCTCTTGTTGAAATAGCTCTTTCAAGGGGAAGGGAGGAAAGCAGGAAGTGAAAGTACACA--GAAATGAATAAGTAGCCGTGCGCTC----AATTTAATTTTTGAAATAAATCATTTCAGCTCCTAATTTACACTTCTCTGAGATGGTGGTTAAGGATAGACAAACAAAGAATACTGGAAGAAAT--TTCATTTTTGTTCCTTTGTTACATTAGATTACTTAATTTTTATGT---GTTTGGTTTGCATATGGAGATTTCTCCAATGAGTCCCCTTCTTTCAA-TTGTTAACTGATCCCGAGGAAAGCTCTGGGAGGCTCATGTCCATCAGCCT--------------GTAATTCACAAATCACAAAAAGGCAAGCAATTGCCCGA----AATAAAGATGACAAACAGTGTGAATTAGCCATTAGGCCAGAGGGCTTCAAGCT-CCTGTGGCTTGATTAAATCAAGTCTAGAGTGCTTAATTCAAAGTGGCAAATGAT-----CCTTCACAAAAAAGCCC-------------TATATAATCTAAT-----------------ACAAATTATAATCTTCTTATGGGTTCTTAAAACATCCAACATACTTAATAGAAGATT--TTTTTGTCTGTGGCATTCCAC---CAGGTCATGCTATAATTTGTATGTAATGTAATAATTTTGGGTTACTTCCATAGAACTTGGATTA-ATCTATCCTAACTTAATGTCA-TACTAAATTGCATTGCATATTTTACACACCAGTATTTATTGCTTGAATACACTTTAACATATTATAGTGTCTATAGCAAAATTTCCTGATTAAGAGCTACTAACATTCTAGCTTATGCAGTTTGTGAGGCAGTGTGGGTTTTTTTCCCTTATCAGTGGCTATCATTTCAACTGAATGTTTTCTT-----CAAGTCCCAGCCAGAAGCATATTTGTGTTGTTACTGTTGCTCAGCAACTGTGATCTCTTCACTAGGTCTGACAGATGCTTTCTCTCCAGGAGAGCAGAGATGCAAGAAGGACAGATGCATTGATCCTCAACACATTATCAGATCTTGTCACACACCCACTTTGAAAAGCTGATAGCATCTAATAATCTTACTCAAGGCTCATTTTACACATCGTTGAGCTTTTACAGTTAAACTTAGAAAAATGCATT ..:.:..x...x...------:..x....x.x...::..:...---------.:.:xx...:.x.:....------:.x:..x.:.::.:.:x.:.x...-:.....:..:x.........x.....x::.x.:::..:.:.....::..:.x:...-..x...:.-------...x....:x.xx.....:.:...:.x..::......x:..........x..x:.:x....x..:xx..:x....:....:x:.:..........:........:.......:..xx....:...............................:x..........x.x.......xx........x.........:................................::............x.........:.........:...:---::::........x::x..:..:..xx..:............:.......:......:...........------------------------.......::....x..:...:.::.-.::...:xx.x:.....x.-....x......:........:...............:x.:................:........:.-.::......:.:....x..:..:.:.:::.-----------............xx.......:.::::::.x....x.....:.:..x.....x..:-:....:..xx.x.....x..:......:x:......:...-----:.x...:.....:..x.:.....x...................................:.:..................x..x...............x......::....:.::.::..x:.x:........:.......--........x...:...x...:....----x.....:...:................::..::................::.............:..............:......:x......--..:xx.:......................:.:.......::.::.---:......................xx......x::.::x......x.x-...:.....:..xx.:....----::::...:......-..:.xx::...--------------:.:.....x....:.::.:.xx:....:.:...:..::----..x:.::.x.:....:..x..:......x.....:x...:..x::.:.x.:..-:.::..x..:x.x:.::--..x:x..:x.....---......x..:x..:....-----:.x.:x...x..xxx..-------------:..::.:...:..-----------------.x...x.......x:----.::.x..:...:------:.x...:..--...:..x:.--....x...:----.x......---..::x..xx.xx.x.:.x:.::::.:...----------------..x:.x.:x:....:.x..-x.:.x....xx.x:.x..x:.-.........xx:..---..-.:..x.x.:..:..:.---------.:..-..:.......----....xx:.x.x::::::...::..x.:xx..-----..:xx.....x::x...----------------..:.::..x..----......-...x..xx.x.x:.xx..xx.x..x....-----...x..xx...x.::.:..........x..xx..:........x..............:.....-.........x........:.....x..::.xx.x......:.x.......--..............:..x:....x..:....:.:....---x...x.:...........----.:.......x:x:...x...xx.:........:...x:.............:...x:....x.:.... 15M6D22M9I18M6D24M1I56M1I8M7I267M3D68M24D25M1I19M1D67M1D30M11I56M1D40M5I142M2D25M4D94M2D45M3D47M1D20M4I14M1I11M14D38M4D53M1D17M2I14M3I18M5D17M13D13M17D15M4I12M6I9M2I9M2D9M4I8M3D29M16I19M1D21M1D14M3I2M1I16M9I4M1I10M4I31M5I17M16I11M4I6M1I29M5D64M1I50M2I38M3I18M4I68M 1319/1792 73.6% 1923/94230402 0.0% 251/1792 14.0% 76333631 NA +3399 chr4 + 190214555 111536579 111536578 111536709 131 CTTGTAAGGATATGTGTGTATGTGTGTGTGTATATGTGTCTATATACACACATACATATATAATCCTTCCAAGTTTATATATTCTCTCTATATATACATATATTACACACATACATATCTACACACATATG chr4 - 94230402 25393250 25393249 25393377 68837026 68837025 68837153 128 CTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGT--TCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtg-taggtatgtatgtatgtatataCACATG ..x:...::..:....::.:...:...:.....x.....x..:.:.......::..:.::.--..:.x...::x:.xx..x.:..xx.:x.:::.:::.:.:-..x::.::..::...x..:.:...:... 61M2D39M1D28M 76/128 59.4% 128/94230402 0.0% 3/128 2.3% 86143329 NA +3845 chr4 + 190214555 111551961 111551960 111552029 69 GGAAAGCAGCGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCAATTTTCCAGAAAAAG chr4 - 94230402 92222049 92222048 92222117 2008286 2008285 2008354 69 GGGAAGAGGCGCTACACGAGGAAGCAGAGCGGCTATGGCGGCCAGACGAAGCCTATCTTCCGTAAGAAG ..:...x:...:..::xx...........:........:..x.....x.....x..:....:x..:... 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 19329912 NA +8790 chr4 + 190214555 111552028 111552027 111552153 126 AGACTAAAACTACAAAGAAGATTGGGCCAAGGCTTGAGTGCATAGAGCCCAACTGCCGATCTAAGAGAATGCTGGCTATTAAATGATGCAAGTATTTTGAACTGGGAGGAGATAAGGAGAGAAAGG chr4 - 94230402 92222917 92222916 92223042 2007361 2007360 2007486 126 AGGCCAAGACCACAAAGAAGATTGTGCTGAGGCTGGAGTGTGTGGAGCCCAACTGCAGGTCCAAGAGGATGCTGGCAATTAAGAGATGCAAGCACTTTGAACTGGGAGGAGACAAGAAGAGAAAGG ..:.:..:..:.............x..::.....x.....::.:............x.:..:.....:........x.....:x........:.:.................:...:......... 126M 104/126 82.5% 126/94230402 0.0% 0/126 0.0% 19329111 NA +13254 chr4 + 190214555 111573392 111573391 111573746 355 ACTAGAATAATTTGTATGAAGGTGAACAG-ATACTTCATTTAAGGAAAATATGGAAAAAAAGAAAATTTGTATGTAAACTAACCAGATGTTTATGATTAGTTCCTAGTTAACATCACCCAGCTGCCTAAAGATGATTTTTATGGAGG---GAGAGCATTGTAGAATGCCATATGTTTAAATAAATCACGAGTATAGCAGTCATGATCCTGGAGCAAAAGAGCTACACATCCCATTTTAGGTAACCTCTTCAAATCACACCATATAACATTAGAACAGCCACTACTCCCCAACACAGTATCTGTTTCCAGTTTCCTCCTACATTTTGATGGGCGTCCTTATGTGTCAGCTTGCATTCTGT chr4 - 94230402 35201781 35201780 35202116 59028287 59028286 59028622 336 ACTAAAATA-TGTATATCCAGTTTGACAGTATATTTTCTTTTTGGAAAATCTGGGAATAAAAGCAACATTTGTACACACTAAGCAGATGTTTATGATTACTGCTTAGTTAACATCACCCAGCTGGCCATGGATGGCTTT-ATGGAAGAGAGAGAACATTTGAGAGTGTCATATGTTTATATAAGTCAAGAATATGGCAGTTGTGATACTGGGGCAAAAGTGCTACACTGCCCATTTTAGGTAAC--TTTCAATTCACATCATATGACAGTGAAATAG---------------ACTGTA---GTCGTCAGTTTCCTGTAATGATCTGATGCATATCAGTATGCGTAAATTT-CCTTCTGT ....:....-.x.:...xx..x.x:....-...:..:x...xx.......x...:..x...::x..:x.x.:.::.x.....x................x.x.:....................x.:.x:....::...-.....:.---....:....xx...:..:..........x....:...x..:...:.....::....x....:.......x.......xx...............--:.....x.....:.....:...x.::..:..---------------..x...---..:x:.........x:x.::x.:.....x:::..xx....:..x.::..-.x...... 9M1D19M1I109M1D7M3I94M2D31M15D6M3D49M1D8M 248/332 74.7% 336/94230402 0.0% 27/332 8.1% 76371611 NA +3121 chr4 + 190214555 111574740 111574739 111574809 70 TGTATATATATATATATACGTGTATATATATATACATATATACGTATATATA--TATATGTGTATATATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA .::..:x.....x:::...:.....:....:....::.:....xx.....x.--.........:.x...... 52M2I18M 51/70 72.9% 72/94230402 0.0% 2/70 2.9% 59093504 NA +3075 chr4 + 190214555 111574748 111574747 111574867 120 TATATATATACGTGTATATATATATACATATATACGTATATATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATA chr4 - 94230402 35554923 35554922 35555041 58675362 58675361 58675480 119 TATGTCTTTCTGTCTTTACAATTTTAAGTATAGGC-TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ...:.x.x.x:..x.x..:.xx.x..x:....x:.-..x......x.:x....:.:.::.:..:..x:.:.......:..:...:.x.x.......x.x..x:.x..x:.x...:.x.:. 35M1D84M 75/119 63.0% 119/94230402 0.0% 1/119 0.8% 76019825 NA +3122 chr4 + 190214555 111574765 111574764 111574828 64 ATATATATACATATATACGTATATATATATATGTGTATATATATATGTGTATATATATATGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x....................x.:.:.:...x:..:.:.:.....:.:x..x.xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 91870491 NA +3068 chr4 + 190214555 111574818 111574817 111574898 81 TATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATACATATATATATGTGTATATATATATATACAT chr4 - 94230402 73418583 73418582 73418663 20811740 20811739 20811820 81 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTAAGAACAT .:..:..:.::........xx..........x.x.........xx...x.x..x..xx.....x.x.x.:.:..x:x.... 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 38156235 NA +3163 chr4 + 190214555 111574826 111574825 111574904 79 TGTATATATATATGTGTATATATATATGTGTATATATATATACATATATATATGTGTATATATATATATACATATATAT chr4 - 94230402 1888770 1888769 1888845 92341558 92341557 92341633 76 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATAT---TTTGCATAGATAT ..x.....:......::.xxx:.::x.x...:..:............:x..x...........---.x.:....x.... 63M3D13M 56/76 73.7% 76/94230402 0.0% 3/76 3.9% 109686056 80528499 +3163 chr4 + 190214555 111574826 111574825 111574904 79 TGTATATATATATGTGTATATATATATGTGTATATATATATACATATATATATGTGTATATATATATATACATATATAT chr4 - 94230402 1885629 1885628 1885704 92344699 92344698 92344774 76 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATAT---TTTGCATAGATAT ..x.....:......::.xxx:.::x.x...:..:............:x..x...........---.x.:....x.... 63M3D13M 56/76 73.7% 76/94230402 0.0% 3/76 3.9% 109689197 80525358 +3234 chr4 + 190214555 111574828 111574827 111574907 80 TATATATATATGTGTATATATATATGTGTATATATATATACATATATATATGTGTATATATATATATACATATATATATA chr4 - 94230402 35554962 35554961 35555041 58675362 58675361 58675441 80 TATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA .....x.:x:.....:.::.:.....x..:.........:....:.x.x.......x.x..x:.x:.x..x...:.x.:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 76019866 NA +4103 chr4 + 190214555 111574859 111574858 111574953 95 ATATATATACATATATATATGTGTATATATATATATACATATATATATATATGTGTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACA-GACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:....::::.:.-.xx:.....x..:...x:.x.x:.:.:::.:........:.:.......:.:.............x.....x... 19M1D75M 66/94 70.2% 94/94230402 0.0% 1/94 1.1% 78176079 NA +3986 chr4 + 190214555 111574867 111574866 111574955 89 ACATATATATATGTGTATA-----TATATATATACATATATATATATATGTGTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:...:.:.:...:.:.:.-----....x..:..:x..x.x:.:.:::.....:....:.:.......:.x.............x.....x... 19M5I70M 64/89 71.9% 94/94230402 0.0% 5/89 5.6% 78176087 NA +3761 chr4 + 190214555 111574869 111574868 111574957 89 ATATATATATGTGTATATA-----TATATATACATATATATATATATGTGTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:.::..:::.:.-----....x..::..x..x.x:.:.::....:.:....:.:.......x.x.............x.....x... 19M5I70M 63/89 70.8% 94/94230402 0.0% 5/89 5.6% 78176089 NA +3408 chr4 + 190214555 111590511 111590510 111591099 589 ATCATCAGGACTTTAATAAGAGAAAATATGTGATGGTGAGTTGTTACAGGAATGTGAAATGATTTGGAAAACTTGTCTCGATATGTTGGAAAATCCAGATACCGTACAGAATGCAAACCAAAACATCCCCACCCCTTCCCCACCTCACATATGTCCCCACCCAAAAGATGTTGAAAACTGTGGATCATGCTTTAAAAACAATTGAAAGCTAGCCAGAGTATATATGTACGTGTGTGTGTGTGTGTATAATATGCATATATGAATCCTTAAAAGGTCATATAGAATT--AACTTAATATTTTTCTTGATTCTTGTGATTCTGTTCCTTATGGTAATAAAATATATTGAAATAC----ATCAATGAAAATGTGTAATATAAATAACTCAATGACAAAATTTAAAAACAAAATGGCAAACTTACCTGGTACTC---GCATGTCTTCCTCAAATCTTGCCACTACTACAAATGCTTTAGATTTCTACTCACAAATGCACGAAGATT-----GAAATCCCAGTTTCATACATATATTATTTGA--TACTATGGCTTTATTCTGTGATAATTAGTATTTCTAAATCTGTTTCAAATTACCAACAGTTCTCA chr4 - 94230402 35212603 35212602 35213099 59017304 59017303 59017800 497 ATCCTCAGGAGTGTT-TAAGTGAAAACCTGC--TAGTGAATTTGGATAGGAAGTTGAACTGCTTTTAGGTGCTTGTTGAGATGCATTACAAAACCAAG-----GTACAGAATTCAGACTGAAAC---------TCTTTCTCA-------------------------------GAAACAGTGACTCACACCTCTGAAA-ACTTGATACTAGGCCAAAGTAGAT--GGAAGTTCTTTAGTTAGCATACAGT-TGCATA---------------------ATAGCCTTCGAACTCACTGT----CTTGGAACTTGTAACCATGCATCTTGTTTTAGTGCAGAGT--TGATATTTGATGATTAGTAAATCCGGGAGATATGAA-----------CACAGTTTGGAAATGAAGT-------TCACAGTGCATTCACTGCTTGGCTGCCAAAAACATT----------CAAGAGCATGAT-TCTCTTCTCTCAGATGAAAAGAAAATAGCTAGGGTTACTGGCTGGCTCTGTGCAGCATATGGAGTACTGTAGTTTTACTGTGTGATAATCATTGCTTCAGAATCTGCTTTCAATTACCAGCAAGTCCCA ...x......x.x.x-....x.....:x..:--.:....:..xxx.:.....xx....x..x...x:::x:.....:xx...:::..:x....:.x..-----.........x..:..::....---------:...:.:..-------------------------------:....x...:x...::.:.:x:...-.x....x.x:x:....:....x..--.x.x..x:x.xx..xx.::..:.:.-......---------------------....xx..--....:.x.:.----....:xx.....:.::x..:x:...:.xx..:.:x.:x:.--...x..x:----..:.:.:..xx:.x.x:....:..-----------..x.:...::...::..:.-------.:..xxx.:.:..---..x..x..x..xx...:x..----------...:x..x.x.x-.:...x...x..:...x.x::.:.x.-----.::x.x.::.:.xxx.x::.::.x:..x..:--....:.:.:....:.x.........:.x.::...x:......:..:x........:..:x..:.. 15M1D15M2D65M5D21M9D9M31D25M1D24M2D25M1D6M21D8M2I10M4D40M2D8M4I24M11D19M7D13M3I20M10D12M1D26M5I31M2I65M 300/481 62.4% 497/94230402 0.0% 124/481 25.8% 76377908 NA +15648 chr4 + 190214555 111610759 111610758 111611058 300 GAGCCGAGACTGAAAATGTATCATCTGCTCAGGTTATTCAATGCCTTGCTGAGTTCAATCAGGCTCTCTTCATCCTCCATTACCCTCATTAG-TCCTGTTAGGTTAGTGCTCAATGTTGATCTGTATCTTGGTCAAGACAATTGTTGCTGATTAACTATAATTACTAGTAATGGGACCAGCTTTCTTTCAG--AGATTA-TGCCTTCAGCTCATCCGAG-CATTGTTCGTCCATGAAAGGTCCCAATCTTCTAGTCATTTACTTGCTTATTCTGTGAACCAACAAGTTGCTTCATGTGTGGGCTC chr4 - 94230402 35221973 35221972 35222275 59008128 59008127 59008430 303 GGGCTGGGATT-ACAGTGCATCATCTGCTCGGGTCATCCTGTGCCTTTC-GAGTTTAATCAGGCTTTCTTCATCCTCCATTACACTCATTAGGTCCTGTTAGGTTAGTGCTCGATGTTGATCTGTATCTTGGTCAAGACAATTGCTGCTGATTAACTATAATTACCAGTAATGGTCCCAACCTGCTTTCAAGCAGACTGCTGCTGTCATCTTGTCCAGGCCGCTGCTCTATGATGAGCAGTCCAAATCTGCTTCCCACTGGCTGCCTTGCTGTCTGACCCAGCAAGTCACTTCTTGTGTGGGCTC .:..:.:..:.-.x.:..:...........:...:..:.x:......x.-.....:.........:.................x........-...................:...............................:....................:........xx...:.:.x......:--...:.:-...:x...x..::...::.-.::..:..xx:x....:x:....x.....x..xx:..:.x:..xx...::.x.x...x...:.....::....x........... 11M1D37M1D42M1I98M2I6M1I19M1I85M 235/298 78.9% 303/94230402 0.0% 7/298 2.3% 76388786 NA +22335 chr4 + 190214555 111631860 111631859 111632212 353 AAAGATGGAGTGAATGAACAGAATACAAGCCTAGCTAGAAACCATGTCAGATACTTCAC--TGCAGTTGCTGAGCATCCTAAAAGCAAAATCCAGACAGAATCTGTCTCTCTATAAATCTTTCCACCCCTTTCCATTACTAGGTGGGTACTGTTGGCTCTAAGCCATCTGATTTTACTATGATTTATTAACTGCTATGCATTATATATGAGATTCAGGTTTGCTGAAGAGTTACCCTTATGGTCATTGTTGCATACAAATCAGCTACTGTTAGAGAGGTTTATTGCATCATTTTATGCTGCTAGCACTTCTGTTAGGCAGTGGTATAATATGTAACTGGAAAAGAAAACCCCTCC chr4 - 94230402 35228012 35228011 35228365 59002038 59002037 59002391 354 AAGGATGAAGTGAGTCAGCATGACACATGTCCTCTTGGAAACCACAGCAAGATCTTCCCAGTGCACTGTATGAGACTCTTAAAAGCAAAATCCAGACAGAGTCTGTCTCTTTATAAATCTTTTC-TCCCTTTCCATTACTAGTTGGGTATTGTTGGCTCTAAGCCACCTGATTTTACTATGATTTATTAACTGCTATGCATTATATATGAGATTCAGGTTTACTGAAGAGTTACCCTTATGGTCAATGTTGCATACAAATCAGCTACTGTTAGAGAGGTTTATTGCATCTTTTTATGTGACTAGGAGTTTTGTTAGGTAGTGTTAGAATTTGTGACTTGTAAAACAATGCTTTCC ..:....:.....:.x.:..x:.:...x.:.:xx:.:.......::x..::xx....x.--....x.xxx....xx..:.....................:.........:...........:.-:................x......:................:......................................................:.......................x...........................................x.......:x:....x.x..:.......:....x..x...x...:...x.x...:x..xx.::... 59M2I63M1D230M 293/352 83.2% 354/94230402 0.0% 3/352 0.9% 76403848 NA +37243 chr4 + 190214555 111635545 111635544 111636118 574 TGTTTTAATGTGATTATATTGGCATCTGATATGATAGTGCTTTGGACCATATTGACATGAGTGAGGATTCTAAGTAGCAACTGTTCAATACCATCCGTTGGACTTCTCTGATAGACCACTTAACTATCTCAGCTTTTCCAGTGATCATCTCATTTATCTAGGATTATTGCACTGAATTTACTGTTTGGTTTTCTTCCAGAACTGAAATGTCAAGTCCAGTGTCATGTATGCAGTAGCTTTGTGCTGTGAGAGCTTCACAGATCCCCCAAAAGCTGCTAGCAGTTGATCTTTGGATAGAGCTAGAAATAAATAAATCCTCTTTAGCAGATCAATATTCATCCCATTTAATGCTTGATGTGAAACTTGTGGATTTGTGGTGGTAATGCTGATGTACAGCTAATCGTTGAAAATGGGCATTAGGGCTTTTATAGCATGGCAACATATTGTCAGGCAGGAAGGGAAAGAAGTGGAAAACACAGCCT-----GGAAAAAAAATATGGTAAGTTTATATAAATTTGCTGCATATTCGGAATCCACTTGGGGGGTTTTACTATGCAA-----TACTAG-----AAGCTAATAATGT chr4 - 94230402 35230837 35230836 35231411 58998992 58998991 58999566 575 TATTTTAAGGCAATGATATTGGCATCTGATAC---------TTGTGCCATGCTCTCATAAGATAGGTTACTATGTAGCAACAGTTCAATATCATCCTTTGGACTTCTCTGATAGACCACTTAACTATCTCAGCTTTTCCAGTGATCATCTCATTTATCTAGGATTATTGCAGTGAATTTACTGTTTGGTTTTCTTCCAGAACTGAAATGTCAAGTCCGGTGTCATGTATGCAGTAGCTTTGTGCTGTGAGAGCTCAACAGATCCACCAAAAGCTGCTAGTAGTTGATCTTTGGATAGAGCTAGAAATAAATAAATCCTCTTTAGCAGATCAATATTCATCCCATTTAATGCTTGATGCGAAACTTGTGGATTTGAAGTAGTAATGCTGATGTACAGCTAATCGTTG-AAATGGGCATTAGGGCTTTTATAGCATGGCAACATATTGTCAGGAAGGAA-GGAGGAAAGTGTTGAGTGCATCCTAACGGGGGAAAAGAACCCCGTAACAATATGT-AATTTAATGCACGTTTGTAATCCAC--AGAGCGTCCTACATTGTAATGATTTGCTAGGATATAGACTAATACTGT .:......x.::..x................:---------...x:....::.xx...:..xx...x.x...x........x........:.....x..........................................................................x.............................................:....................................:x........x..............:.............................................................................:................x:..:...........................-............................................x.....-...:::.....xx:.:::..x...-----..:....:..:x:x....xxx...:.-.....:x....::..:.x.......--:.:.x..::...xx..:..-----.:....-----.::......x... 32M9D365M1D50M1D24M5I26M1D25M2D19M5I6M5I13M 490/560 87.5% 575/94230402 0.0% 29/560 5.2% 76404708 NA +8888 chr4 + 190214555 111639845 111639844 111640137 293 TCCTTGAAAAGATTTGTGCCCTCTTTTTATGAAGACAATGAATGAGTAGGAATTTTATACCACAGACAATGAGCGAGAGACAGGAAGACACTTTGATGTTCAAATAATTCGAC--AAGTTTTGGC-------ATTCTTAAAAAATAATGAAAAGGATCTTTGCCGAAATTTTATTTTGTTTTT-GTTCTGTCTTCAGTTCA-ATAGGCGGGTTCAGGCAGGAAGTACAGCCTGAGCGACTCAGCCAGATCTAGAGGGATTAGTTACAGCAAGAAGGCTGTTGTGTGAATCTGAGTCACTTTTTT chr4 - 94230402 35233063 35233062 35233342 58997061 58997060 58997340 280 TCCTAGAAAAGACCCTTACGCT-GTATGACAAAGCCAAGGAATGATTAGGATTCT----------GCACTGATTTTGTGA----AAGATTCTTTGAAGTTCAACCTGCATGGCCCATGTTTTGTTTGTTGTTGTTTTTAAAATGTCTC--------TTTTTGTTGAATTTTTGTTTTGTTTTTCATTCTGCTCTCAGAGCGCATAGGCGGGTTCAGGCAGGAAGTGCAGCCTGAAAGGCTAGGCCAAATCCAGAGGGATTAGTCACAGCAA-AAGGCTGCTGTGCGATCCTGAGTTACTCTCTT ....x.......:::x.:.x..-x.x.x.::...x...x......x.....x.:.----------:..x...x:xx.x..----....:x......x......x:x::x:.:.--.x......x:-------:..:......x:.xx:--------.:....::...x....:..........-:.....:::....xx.:-.......................:........:x.:..x:....:...:............:.......-.......:....:..x:......:...:.:.. 22M1D32M10D15M4D29M2I10M7I16M8D27M1I17M1I69M1D32M 196/269 72.9% 280/94230402 0.0% 35/269 13.0% 76406782 NA +3165 chr4 + 190214555 111642237 111642236 111642336 100 AAAGGACAGCAGAGGGAGCCCCTGCATGACTTAAGAAAACCG--------AAGGCAGGCAGAACAGAGACTT-TTCAGGGTGCGAAGTTACGCATGGTGCCCTCTACTG chr4 - 94230402 35234923 35234922 35235024 58995379 58995378 58995480 102 AAAGAACAGCAGAGGGAGCCCCTGCATGGCTT----AAATCGTTGGTCTTGAAGAAAATGGAGCAAGCGCTTGCGCAGGGTGCCAAATCTC---TGCTGCCCTCTCTTG ....:.......................:...----...:..--------:.:.x.::::..:..::x:...-:x........x..:.:x.---..x........x:.. 32M4D6M8I22M1I18M3D15M 69/93 74.2% 102/94230402 0.0% 16/93 17.2% 76407314 NA +3560 chr4 + 190214555 111662563 111662562 111662683 121 AGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGGGGAG-----GGGGATGGGGAGGGGGAGGGGGAGGAGGGAGGATGGGGAGGAGGGGGAGAGGGAGGAGGCAAACACTG chr4 - 94230402 92767464 92767463 92767589 1462814 1462813 1462939 126 AGAAGGGCGAGCCCAAGAAGGAGGCGAGCGAGGCTCTGGTGGCCGACAAGGTGCTCTGGGGAGCCGGGAAGCGGCGGGGGCCGCGGGGTGAGGGGGAGGAGGCGGTGAGGGAGGAGGTGGAGGCCG ..:...:x...xxx:.........x..:x....xxxx..x..xx..x::..x.-----...:::x....:.x..x.....xx.x...:x..x..........x..x...........:::.x:.:. 53M5I68M 79/121 65.3% 126/94230402 0.0% 5/121 4.1% 18895099 NA +10569 chr4 + 190214555 111662890 111662889 111663161 272 TGTTTTCAATTTTCTAATTCACATTCT-AGATGGCTCTGGTTCAGCACTAGAA-ATTTAGCTC-----ATTT----TCCAAACATCACATTAATGCATGATTTAGGAAGTAAACAAGAATTGAAAATAAAATCCTCTTGGAAATTCTGTTGTTTTAAAATCTGAAGAGTTCAGTAATCCTTTAAATCTGTAATCACTA--AAGAAAGCTATTGTCACTAAATCACATGTAGTTCTACAAAAACCACATAACACAAAGTTCTCCAAAGA--ATAATTATTGTTAAATG chr4 - 94230402 35245648 35245647 35245934 58984469 58984468 58984755 287 TGTTTCCATTGTTAAACCTCACTTTTTCAGATTATGCTAGTTTAGCACTAGAGTACTTAGCACTGCGTATTTCATATCCAAAAGTCATAGTAGTTCATGTATTAGGAAATAAACAGGAGTTTAAAATAAAATCCTCCAGGATCTTCTGTTGTTTTGAAATCTAAGGGGCTCTGTAATCCCTTAAAGCTGTAAATACTAACAAAGAGACCATTGTCACTAAATCAAAATCATATTTGCAGAAACAGCATACTGCAGAGTTTCTCATAGATGATATATGCTGTTTAGTG .....:..x.x..xx.x:....x..:.-....x::x..:...:.........:-.:.....x.-----....----......x:...:.x..:.x....xx.......:......:..:..x..............:x...xx............:......:.:.:.:..x.......:.....x......x:....--..::.::.:...............x.xx:.xx.:.:..:....x:....x::..:....:::..x...--...xx.::....x.:.. 27M1I25M1I9M5I4M4I122M2I68M2I17M 198/272 72.8% 287/94230402 0.0% 15/272 5.5% 76417242 NA +7685 chr4 + 190214555 111669989 111669988 111670154 166 TAAACACATTTCCCTCTGCTTATCTAGGGCTCTCTTC---CATTCATTGGGATCAGTGTTTAGATTATTTCCAGAGAGGGGACAGCACCTCAT-CAATGCCTGTGAAATGTCAAGGGGTCATCTGAGAATGAATTCACCATTGGAGCCTGGAAGGAATGCATTTACTTTT chr4 - 94230402 35248840 35248839 35249006 58981397 58981396 58981563 167 TGAAGACATTT---TTTCCTAATCTCTGGTTCTTTTCTGACAGTTAGGAGGATCAGTGTTTAGATTATTTCCAGAGATGGGACAGCCTTTTCTACAGTGACTGGAAAATGTCAAAGGGTCATCTGAGAGTGCATCCACTGTTTGAGCCTAGCAGGAATGTCttctttttt .:..x......---.:.x..x....xx..:...:...---..x.:.xx:............................x........x::.:x.-..:..x...x:.........:.............:..x..:...::..x......:.x.......:x..:x:.... 11M3D23M3I53M1I76M 125/163 76.7% 167/94230402 0.0% 7/163 4.3% 76421149 NA +39549 chr4 + 190214555 111676513 111676512 111679193 2681 CTCTTTCATGTTATCTTTTCCTGTTGTCTCAAGATAATTTTCATTTATATAAATGAAA-GCTACCCAGAAG---CTATAAACCCTAATTCCAAACCTAGCTGGAAATCACAATCAAGACTTCTAGCTATTAATAGAGTGACTTGTCCC-CAGTAGGATGTCCCAGGAAGTGAATTAGCTTTGCATTAAACATCACCAGGGATAAACAA--GAAAACTCACTCTAGAAGC-ACTGCCAGTGGCTTAACATCAACTCACAGAAAGAGCTCAAGGCAAGCTTCACTCCTAATAAATATCTTGATATTGAATCTAAGAGACTCTAAATTTGGTTTGCAAGATTGCCAACACATGTTACAATGCTTCCTGGGGCCCAGCACCACCACAGAATCATTCTAAAGAAAGCCAACAGTAGTGGGTGAGAGAAGAGCTTTATATCTGGATTCAGTTTCTCATAAATGAAATAAATGTGTCTTTTT---AAGGCCTTCCGC----ATGCCTGTTGACAAA--AATAAG------------------AAACGCTGCAGATTTACAGGGCAAGAAGACCGAA--------------GTTCCAAGAGTCTTT------GTCCCAGAAAAGTTAAATATTTGAA--GCTAACTTGTTACAAAATCC---------TGCCAGAA--------CTCTCCAGACAATAATCAGAATTTGTGTTGAAG-----------AGAGTGACCAAGTACAATAATCTCATGAAGTTTTGAGCTGCGGATTCTTTTATTTTTCTCACTGTTTTCATCAAATGTACTCTATACAACAGTAAGGATAACAACAAAAATAACTGACGTTATTACTGTTTGGCACATCATCTGATGTTAGG---CAGTGCAAGCCATCTGTTTACCCAAATGTGAGTGTAAATTTTTAAAGA----AAAATTTTAAA---AGTGAAATTGCTTAAGGACC-TATGATAGAGATCAAAGCAAATATCTGAAAA-CTTCTCTCAGTTCAGA--AGTGTGAACTTGATGTTATCC----------------AACTGTGTTCAAAATGTG---------ACTTAAACTTCATTTCCATTTCTAAGAATAATGCC-CATAAAATAAGCTAATCATTCATTCCTTTGTGAGCCTATCAAGCTAACAACTGTTAGAAGTATTAATAATATCAGTATTTT----AAAGTGTATACCA----TTTGTAAATCAACAGCATTTGCTAACTAGTCCTGTAAGAATTACTGGGAAATGGAAAGATAAAAACGTTTTTTTACAATGAAAAACATGTAAA-ATTGGCAAAATCTTT-AGCTCAATAATTAA-TATCAACA-TCACATATCTTAGT----CCTAAATCTGTTCTTTTCTTCTAATAAAT-------ATTATTTTGAGCCCATCAATAAACATTTCCTGAGATAAGATAAA-GGATAAAAGATAGTCTTAAAAATAAGGAAGGCATCAAATAAAACTTTCCAAGTATAATCTTATTCTCTTTTTGGTATTGGTATTATTGTTATCAATA-TTGTTAATTATTAACATCATTAAAATGATGCAGGGATTTACTTCTAACAGGAA---AATGAACAAGGTTTCTCTCATGTTTATGTAAAATTACTATAAAATATGAAGTCTCCTCTATTCTCAGGAAAGAGAATTTTTGATTGTGTGTAG-TGATTTTCATTTCTGTTGAAGTAGCTATATCTGTTAGTTGGCCAAAAAAA--------TTATAAAGTAAAAATGTTCACTTTGAAATTTGCACGCAAAT---------TTTGCAATAAAAACATTTTTTAACCTGTAAACAATTTTTATCTAATGTAGAGGATTTCTGCTGCTGCTACAAAACAAAAAGTAATCACACCAAATACATTAAAGGCGTCACACTAACCAAGCCTGACAGTGCTAGGATCGGGAATCAGACATAATCTTATTATTTGGCTGTAGTTTGGACAGCTTCTAGGCATGACTTTAAAAACAGAATTTAAAAGATTACTTTCTAAAATGGCATTTTCCCATTCAAGCTTCTGTTTCCAATTTGTATTCTCTCTCACACTCCATTTCTCTCCTTAC-------TCCCTTTTCTAACTCAGCCTCTTTTTTCTCCTCTAGTCACCTTCTTGCTTCTCCTC------TAGGCTTCTTGGCCAGCTATTTGTGA--------AGTCCTGACAC-----ACTTCCATG------GGATTTCCTGTTTGCCTATTATGAACTAAATGCAAATTGTCTCAACA-TTATGCTAACTGTGAAAGACCAGGTTAGAGGA------------TAGCTCACATGTA--AAGTCATTGTTGTTTAGTGAAACATTGACATGGGGCCAAA--TTTTTCTTAAATGAGTTTACCAAAGGCCGT--TATCAAGAAACTAGATCTTAGGAAACATTTATACAAAACATGGTGATAGTGGGAACCAGATGCTTTGGTTTCTATTACAACACTTTTGGGGGGTGGTTTTTTTTTTTCTGGTATAAAAAGCAAGTTTCCATGCTTTATCATAGACATGTT--GCAGTAAGCTGTATCACAGTTTGCCTCCAGTAATCTGTGGCTGTTCTTAATATAAATGGAGAAGAGCTATGAATTCCAAACTGACATGGTTTCCCTGGTGTGAACGCCAGATTTTTCTCTAATCCCAAGATTAGATACTGAAGTGCTGCTTCAATTGTACAATATTATCACATCCTATCACTTGGCCCCATTTCAACCTGGAGCATTTATTGACAATACTTTCCAAGTTGTTGCTAAGTTGTGAGCTCTCCACCTTATCTGTTGCTCCTTCTACAGTCTTAACTAGCAAGGCTCCCTTAGAGGAAATGTCCTGCGAAT-ACAGCCACCAGATACAGT chr4 - 94230402 35250477 35250476 35253036 58977367 58977366 58979926 2560 CCCTCTCATTTTGACTTTACTTCTTGTCTCTAGCCAATAGTGATTTGCTTAAATGAAAAGCTTTGCAAGAGATTCCAGAAACCGACTTGCACAGCCCTGCTGGAAATTATGATCAGAACTACTAACTGTTAATAATGTGACTTGTTTCTCAGTGGGATGCCCCATGAAGTAGATTAGCATTGCTCTAAACATCACTGGAGATGAACAATGGTAAATTCACTCTAGAAGAGAGTGCCAGTGGCTTTACACAAACTCCCATAAAGAGCTTCAGGCAAGAATTGTTCTTAATAACTATCCCAATATTGAATCAGAGAGGTTCTAAATTCAGTTTGCAAAATTATCAACATATGTTGAAGTTCTTTCCAGGACCTGGCACTGCTGTAGCTTCCCTTCAAAGAAATCAAACAGTAGTTGGCTGGAGAAAAGCTTTAAACCTGGATTTAATTTGTTGCAAATGAAAGAAGTGTGTCTTTTTTTGAAAACTTTCCTCTCCTATACCAAAGTACAAAGTAGTAAAAGTCTGCTTGTTTCTCTTAAAGCCTGAAGATTTTCTTGTTTAGAATA--GAAATGTGTTGTTCTTTGTTTAAAGAGCTTCTTGAAGAGGAAGAGAAAAATTATGCAATGGAGTTGCTGTTTTGAGAAAGTATACAGAAGGGAATGGAAGAAAAAATTGGTTCTATTTCCTATATTCAG--TTTTTGTTCAAGAACGCCAAGGAAGCATACCCAAATAAAGCACTCTC--------TTGTGCTATGG----TGTTATTTGCCTCCATATCTC------ATGCAT------------------------------------ACATTGTTA-----TGGCTTGTTATCAGGAGAGAAGCAACAATACATACTATCT-------------TCAGTATGGATTTTTGATGATGGCATAATGCTATGGCTGGTGAAGCTGTAAGTGAATTATATAAGGCATGTGGAAGCCA----CTGAAAATTTTCTCTCGGATTATAACACCATGTATTTTGTATAGTCTGCATAGGTAACAGGAAAACTATTTTAGGAATGAGCTAGAAAATACTAAAATATTTTGGCACTGTTTTGTAATCTTTCTGTCTTAAGTAAGACAATC---CAAACTATTCTGGCTACAAAAAGACGAAGATCAGGAACAGTATGGAAAA-------ATTTTCAAGGAAGTTTATATCACTGCTTTGAAGTTC---------------CCAGTCTT--------------------GAGACATGTTGACGTCTT----------GAGATGTGCAACTAATGGCAGATGCTCTGAGTTCAGTAAGGAAGCACTCACATTCACGAAGTTTAGTAGCATTTAGGTGTGT------------ATAAATGGACGCAATTACTGAAGGGCAATAATTAA-----TTCTGCATCAAAATGAATTGCAAAAAGGTTGGTTTAAATTTGATGAAAG-----------GCATTTGAAGTAATCTCTGGTCTCTTTGCTG--------ATCATCCCCAGCCCTACCTGTCAGT-----------TTGGAATG--GCAAGCCATCCCCT-TGACAGAAATCCTATGA--AAGG--------ACATCTGTGCTGTGTGACAATGTCATATGGA----------------------AGGATTACTGGTTTAATAGAGTTGAGTTTTGTTCTTGCTCAAGCAGATGCATCTGTCA---GGCTAAACAAAGTGCCATGTTTTATGGAAATAATTTTCACTTTGAAATTTCTATGCAAATGaaaaataatttaaaaaaaaa-------tCAACTTGTAAACCATTTCTGCCAAA--CACATGATTTGTGTAGCTGTTGAAAAATAAACAGTAGTTATGCTTGGAGTAT--------------------AGCCTGA-------------------------------------------GTGGT----ACAGCTTGT-------------AAAACAGTATTTAATACATCACTTTCCAATATGGTATCTCCC--------CTTTTTTTCCTCATTTATTTTTTCCTTC---TTCAATTTCCTGGCTTCCAAAACAAACCTCTTTGTGA-TCTTCCTCTTTTTTGTTGCCTATGTATGCACATGTATATTCACAACAAATATTTTTTTTAACAAACGAAAGAAAAAAAAAAAGAATCTTATCACTAAGGAACTCTGTGACTTGAGAATTTC---TTTGCCTAT-----GCTAAAT--ATTTTACTTCAACAGTTACAATATCTGC--ATGTCCA---CAGAGGAGAATGTGATGATTGGCTCATGTGTATGAAGTCCTT-CTGTGTGGTAAAATGCTGGTTTATAGGCAGGCCTTCTGCTTGACTGTATTTGTCAACGACTGTAATATCAAGGATCTGGATCTTTAGAAACGTTCATAT-AAACACAGTGATAGTGGAAAACAGATGCCCAGGCATCTACAGCAGC-----TGAGAATT--CTTTTCTTTTCTTGGACGAAAAAGAAAGTTTCCATGGTTTTAAATAGGTATTTTTGGGGGTGAACTATATCAAAGTTTGCCTCCAATAATCTGTGGCTGTTATTTATATCTGCCAAGGAGAGCTATAAATTCAGCCTTGACATGGTTTCAATAGTGTGACCCTCCAGATCTGCTCTAATCCCAAGATTAGATACTGAAGTGCTGCTTCAATTGTGCAGTATTATCACGTACTATCAGTTGGCCCTATTTCAAACTGTAGC-TTTATTGACAATACTTTCAAAGCTGTTGCTAAGTTGTGAGCACTCTGCTTTATCTACTGCTGCTTTTACAACTACAGCTTGGTATAGTTTCTCGCAGGAAGCACTATGCTAATAATAATCGCTAGACAAAAT .:..:....x..:x....x.:.x.......x..x:...xx.x....::x.........-...x:x..::..---.:.x.....xxxx.x.xx.:..:x.........:.::....::...x...:..:......:x.........::.-....:.....:....x.....::......x....x:..........::.:...:.....--.x...:............x-.x............x...:x.....x..x........:x.......xx.:::..:......x....:::..........x:....::........::........:...::.....:.....:x.:.x...:.::..:..::....::.:::..xx..x:.::.......x.x.........x..:x:.....:.......x.:.......:.:...x.:::........x..:...........---..::.:....x.----..:..x:xxx.....--.:...:------------------...xx...x......x.xx.x:x....x.--...--------------...:x.....::.:.------.xxxx......:...x::.x.x..:--...:x:...xx.x.:x..x.---------..xx....--------:...x:xxx.x...x....--...x....x...-----------..x:.:x....:..x.::.x....--------...x...::..----.x......x:...xx.:.:.:------...:.:------------------------------------..:..:...-----....x::.:...x.:x.xx.:.---..:.:..x:.:....-------------.x...:.::......:.x..----.x...x:..x:---:.....::..:xx:x.:.::-...:.x:x.x:.x:....x.----.......-:.......:.x.:.x.--.x::..x.:..x:.:.x:..:----------------....:.x..x::....x.---------...x...:x.:x.xx.xx.x.:.x:x...xx.x.:-:x.x..:....x:....---..xx.:x..x..:x:x:.xx...x::.x:.:::xx.:x.....x:.x..-------.....----:....x....:..----....x.:x..---------------.:....:.--------------------..:.x..:xx:....:..----------:.:.::..:..x-.x.....:.xx..:.-..:...:...xx..-:.::x...-....:x.x:.....----::..::.x...------------......-------....:.xx::.x.x..x.x...-----.:...x:x:..:..:..-x.xx.....:.x.x:.....xx.:.x...:.-----------:.x..:x.....xxx...x:.::::..x:..--------..:..:x::.x.xx..-:...:.:.-----------..::....--...:.xxx.:x.:.-.:....:..---x....--....--------.::.:.:..:x:x:.x..x..:xx.....:.----------------------..:...x:..:..xx:.:x..-...x...::..::..:.x...:..x.::......:.---...:...x...--------..x..x:.x..x...x...............x:.:......---------...:x..x....-------.:...:.......x....:.::.x..--:.x.x.....x..:x....:.:x....:...x....:.:.::.:x::x::..--------------------.......-------------------------------------------..:..----.......x.-------------.......x......x.x..:......:..x....:..:.:..--------...:.x..:.:x....:.x..:..::..---:..x.....::xx...x.-------x..::...x.:.-..xx..........x.:x:...xx:.:x:x.x..:x.x.:.x.------..xx:..:..::.x.:.x.xxx:x:.--------.:..:.:x...-----.x:..::..------.:.....---.........-----:......--.xx..:::......-...::x..x...:--.x.x...---:......------------.:.....::....--.....x..-:...x.:..:...:::..::x.:x:.x..::--..:.x...:.x..x:...::...x.:.:..--.......:.x..:......x:.....:..:...:-.....::..........:..x.......::x..:x....:x:..:.-----..:.::x.--:....:....::...xxx......x...........x...xxx....::..x..--.x:..:.:..:.....x............:...............x..x....xx::x:..:........:.....x:xx:............xx.:......x.x:.x::x.:.x..........................................:..:.........:.x......x.......:.......x...x...-..................x...:..................x...::.:......::....x...:....:::x:.:..x.xx.x:x.::..::x.....:::::x...x...-.:.::.:.:...:.x.:. 58M1I12M3I74M1I59M2I19M1I245M3I12M4I15M2I6M18I29M2D3M14I15M6I25M2I20M9I8M8I19M2D12M11I24M8D11M4D21M6D6M36D9M5D22M3I15M13D20M4I11M3I20M1I20M4D7M1I16M2I21M16I18M9I35M1I17M3D49M7D5M4I13M4I10M15D8M20D18M10D12M1I15M1I14M1I8M1I14M4I11M12D6M7I22M5D17M1I31M11D31M8D16M1I8M11D8M2D14M1D9M3I5M2D4M8D31M22D21M1I36M3D11M8I41M9I12M7D26M2D52M20D7M43D5M4D9M13D42M8D28M3D18M7I12M1D43M6I26M8I11M5I9M6I7M3D9M5D7M2D14M1I13M2D7M3D7M12I13M2I8M1D31M2I30M2I34M1D46M5D8M2D54M2I204M1D113M1I18M 1573/2335 67.4% 2560/94230402 0.0% 571/2335 24.5% 76426036 NA +3248 chr4 + 190214555 111679308 111679307 111679369 62 ACTTTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATAT chr4 - 94230402 48089486 48089485 48089547 46140856 46140855 46140917 62 ACCTTGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ..:....:..x...:x..x...:.:.::::........:....x.x........:..:.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 63589822 NA +3229 chr4 + 190214555 111679310 111679309 111679379 70 TTTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATGCTAATGTCA chr4 - 94230402 70982622 70982621 70982691 23247712 23247711 23247781 70 TTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCA ...xx:............:.......:::.:...x::.:x:........::.::...:...x.x.x.... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 40696688 NA +3132 chr4 + 190214555 111684373 111684372 111684422 50 AAAAAGAAAGAAAAGAAAAGAAAAGAAAAGGAGAAGAGAAGAGAGGAGAA chr4 - 94230402 34672399 34672398 34672448 59557955 59557954 59558004 50 AAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAAATGAGAA .........:..x:..........:....:.:..:.:..:..:.x..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 77011974 NA +12659 chr4 + 190214555 111693666 111693665 111694088 423 TATTTTTATTTTTTTGAAGTGAAATATATTTCAAAGTTATCCAAGAAGTTGTACT-ACTTATAGGATTAATTATATAGTTTCTGTTCTGAAATTATGATTTGATTTTAAAGATTCTGCCAGTCTCTCTGTATTTTAGATTATCACACAAGCTCTAGGCTGAGAGACACAAAGGTGAAAAAAGTAACCTACTTACCCTTTAAGTTTATTACTTTCAAAAGTGGCTGGTGTTTGATTTCACGTGATGTTACATAACATGA-CTTCCAGGAGACAATTTACAGCCTTGACATAGTAAGGTGGGCTGCTTAAGCTCAACGCAGTACTGCTGTTTTATGTAAGTCACTGTCAGGCATATTTATTATCAATACCTAAGGCATGCCAAACAGCTGCACTT-GCTCTCTTTGAAATATTTTGAACATTTTTTAT chr4 - 94230402 35258368 35258367 35258780 58971623 58971622 58972035 413 taCTTCTACTGTTTT----------ACTTTTCGAAGTCTCCTTTAGAACTGCATGGATTTTTAGGCTTTGGTCTATAATTCCAGTTCAGAAATTACAAATTGATTTAGAGACTGCAGTGTCCATCTGTGTATTTTTAAGTGTTGTACTGGCTGAAGTCTGAGTGCTGTAA---TGCGATAAGTAACCTACTTGCCCTTTAACTTTATTACTTTAAAAAATGGCTAGTGCTCCAGTTTGTGGGATGTTGCATAACATGAGACTCCCATATATGATTTATAACATTGACATCACAGACTGCCCTGGTTAATGTCAGCCCTGGTCTGCTGTTTTATATCAGCAACTATCAAGCTTATTCGTTATCAATAAATAAAAAAGGCCAAATAGTTTCATTTAGTTTTCATGAAAAAATGTTGTATTTTTTTTAT ..:..:..:.x....----------.:x....:....:x:.:xx::.::..:.:x-.:..x....x..x:x.x....:..:.x....x.......::.x.......x:.::x.x.x.:xxx:x...x........x:.x.:.:::..x:...xx..x.....x.x:::..---..x:.x.............:........x...........x....:.....:...:.:x.x..:::.x......:..........-x:...x:x.x.::.....:.:.x.......x::.::x..xx...x....xx...:.x.x.xx............:.x..:x...:...:..x....::.........xx...::x.x......:..:.x..:..-.:.:..x.x:...x..x...x.:x........ 15M10D30M1I114M3D85M1I134M1I32M 272/410 66.3% 413/94230402 0.0% 16/410 3.9% 76435298 NA +8886 chr4 + 190214555 111696550 111696549 111696754 205 CCATTGTAAAGTATGGTTTCATTTACAGTCATATCACAAAATAAGATTACTTTCGTTGACTGTGAGATTAGAGCCTTCCCCACAAATGTGTATTTTATAGCTACTGTTAGGTGTAAGCAATCATAGCTTAAAACTGGAAGCAAACACACAGAAATCATCCAGTT--GATTCAGGCTAGAGGCTC---TTAGGCAAGTCACTCTTCATTTG chr4 - 94230402 35261310 35261309 35261517 58968886 58968885 58969093 208 CCACTGTAAAACA--ATTTCATTCAGAAGCGTGTCATAGAACAAGATTATTGGAGTTGACTGTGAGATTAGAGCATTACCTACAAATGTGTGCTTTACTGTCACTGGTAATCATATGCAATCATGGCTTAAAACGGGGAGCAAACATATGAAAATTACCCATATCCAGTACAGGCTATAGCTTCAAGTTGCTTAAGTTGTTCTCCATTTG ...:......::.--:.......:.x.:x.:.:...:.:..:.......:.xxx....................x..x..:..........::....:x.::....x..:x::..x........:.........x..:........:.:::....:.:...xx.--::.x.......x..x:..---..:xx:....:::...:...... 13M2D149M2I18M3I23M 146/203 71.9% 208/94230402 0.0% 7/203 3.4% 76435240 NA +3007 chr4 + 190214555 111697288 111697287 111697387 100 CAAGAATGCAAGATTAGTTCTTTTGGAATTTTGCTGACAAAATATGCAGCATTGTTTGAGACAAAAGAAAACATAAATATAGTGGGGGCATGTATTGACT chr4 - 94230402 62821236 62821235 62821335 31409068 31409067 31409167 100 CAAAGATGCAAAAGCACTCATCTCTGGGTACTGCTTGATGAGCTTTTAGCATTGTTTGAGATAAATGAAAGTGTGCATGCAGTGGTGTTATGCATGTACT ...::......:.x:.x.:x.:.:x.::.x:....x:xx:.::x.x:..............:...x....:::.:x..::.....x.x:...:..xx... 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% 48876052 NA +3864 chr4 + 190214555 111698430 111698429 111698614 185 GAAGAAGGGGGGAAGTGGGAGGGAGGGGGGAGGAAGGAGGGGGGGGAAGCAGGGAGGGAGGGAGGGAAGGAAGAAAGGAAGGAAGAAAGGAAGAAAGGAAGGAAGAAAGGAAG--GAAGGAAAATGAATGAAGCTTGAA---TGTAGCCTTTGGATAATTTTC--------TAATCAACAGACATGTAAAGTTATGAG chr4 - 94230402 40465775 40465774 40465963 53764440 53764439 53764628 189 GGAGAAGGGATGACAAGAATGAGAAAAGGTAG--AGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGG-----AGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGAGCCTAAAAACAATAGCTATTAAATTATTTATAGTTACGACAGTAAACAGACATG--AAGTTATGGG .:.......:x..x:x.::x.:..:::..x..--..:..x::......:::..x:x............:..:......-----...::....:..:x:...xxx....xx..:--:..:x..x.::..x::...:.:..---x:....:x..::..x....x:--------:.:.x..........--........:. 32M2D44M5D30M2I24M3I21M8I15M2D10M 114/176 64.8% 189/94230402 0.0% 22/176 12.5% 71232655 NA +3084 chr4 + 190214555 111701563 111701562 111701617 55 ATGACAGAAAATAGGGAAAAAAAATGAAATGAAGCTGCTGTTGTGAGAAAGACAA chr4 - 94230402 1382107 1382106 1382161 92848242 92848241 92848296 55 ATGACAGCAGACATGGGAAAGCAAGGAAATGTAGCTGCTGGTGCCAGAAAGACAA .......x.:.:.x..:...:x..x......x........x..:x.......... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 110319456 79895099 +3215 chr4 + 190214555 111714379 111714378 111714447 69 ATGTGTACATGGATATGTATTAATATGTGCATATGTACATGAACACACAACCCCACATATATATATAAA chr4 - 94230402 8395796 8395795 8395864 85834539 85834538 85834607 69 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ......:...::.:.......x.:..:..:..::x.....x..:.....xx.x....:.:.x.:.:... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 103318583 86895972 +3048 chr4 + 190214555 111728392 111728391 111728502 111 TCATTACTACACAGGTGACCTTAAGCAAGTTACTTTATTACTCCAAGATTCAGTTTCCTCATTTATGAAATACTGACATGCTTGTACCTATCTCATAAAAATGTTGTGAAA chr4 - 94230402 11947205 11947204 11947315 82283088 82283087 82283198 111 TCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATACAATGCTAACCTTGAAGGAACTTTGTGAAA ..x.:....xx::x.........:.:x...:....x..:xx:.::x.x::........:...x........:x.x.:.xxx:x:.:.:x.:..::x.::..:x........ 111M 66/111 59.5% 111/94230402 0.0% 0/111 0.0% 99781187 90433368 +35132 chr4 + 190214555 111736357 111736356 111737563 1207 CTGGCCTACCACCTTAAGCTCTTTTTATGGGAATTGCACAGTAATGATTTGTAAATCTTCCAAAGA---AAGGTGAAAATCAGAGAAGCAAGAATTCCCGAAGTCCTGATGTTTCACAGATTAGTAGCCTGCCATTAAGAAACTGTGGGGTT--TGGGTGAGTGA-GCTGGAGCCATAAGCATTATCAGGTAAAAGTGAGGTTTCCTGGGGCTGCAGAAAGAAATGAGCTTGTTACTACTTCTGGTATTAATCATAATAAGTGTTTTATCTAAGCCTGTCATGTTTAGTTTCTCCATGCAATTTACCTCTCAGGCACACTGTTCACAGTATCAGTTGGCCTTATCTTTTAACTTATAGTCTTCAAGTGCCTAAATGTATTTCCTCCAAAGTTCCCACAGTTAACATGAC-AAAGTGAACATCAGTGCTATTTTAAGACAATGCCGCACCCGCGTTATGAAAGACAGAGTTGCTTATG-CCTGGCTACTCCTATCATCTGTTGAAAAGCTTAACAGGCAGCACTGATTCTTTGCCTAATTGCAGTTTTGCTGTG---------------------AGATTAGCAAGATTTTAAATGTAGAGCCCAAGTACGTGCTTCAATACATTCATTTATTTCATTT-------------TTCACCTTTGCAAAGAAATAAAATAAAGATCTACTTATCCTCTATCTTGCTCGTCTTTTATCGACTGACACTTGTTAGCCAATGGAGTCAAGTAGCTTTTGAGGGACCATATTATGAAGCTCAATTTCTAAGAATCATAGAACGCTACTAGGAGCAACCATACCAACCAGCAAAGAATTCAAACCCACAACAATGCAGAGACAGACTTTTTGC-TAAAAATAGAGGAAAAAACTAGTAGCCCTTATAAACCCAGTCCACAGTTCACATTGAAGAAAGATGTCAACCTGCAAGGAAGATATGACTTGAAGATTAGGAAGCTAATAATATACTACTCTGCACGACCCTATTTCATTGTAGTCCTCTTATGATCTGCTAATAATCCTTTATAATTAAGCTTCCAGTACAATATTAAAATGTAATCCACATGAACACCAATCGCAGTGTATTTCAATGGC-TGAAGTGGTTACCGCTTCCAGCCATGCATGACAATCACTGTGCAGCTTTAATTTCATATTTTTAAATGACTTGCCCCAAGATTTCAAGAAAAATTATGATTCGTTTC---TATCCATAAGTACAGCAAAATAGGTCTTATTTAAAC chr4 - 94230402 35270307 35270306 35271485 58958918 58958917 58960096 1179 CTGGCAGGCTGTTTTAGGTTTTTAATAGGTGCATACAGTCGTACAGACTTTTAAATCTTCTAAAACTTTCACATGAATAATGCAGAAGTTAAAATTCACATGGGTGAGAAGTTTCACAGATAAGAGACCATCTACTAAGAAAGCATGTGGTTGCCCTGTGAGTGCCACTGGAGTTGTAAACATTATCGGGGAAAAGTGAGATTTCCTGGGGCTGCAGTAAGTAA--AGCCTGTTACATCTTCTGGTATTAATCATAATAAGTGTTTTATCTGTGCCTGTCATGTTTAGTTTCTGCATGCAATTTACCTCTCAGGCAAGCTGTTCACAGTATCAGCCAACCTTATCTGTGAACTTATGGTCTTCAAGTACCTAAATGTATTTCCACTGGAGTTCCCACAGTTAATGTGACAAAAGCCAACATAAGTGCTATTTTAAGACTGCAGTGCATCTCCTTACAAAAAAATAGCATTGCTTGTATTCTTATCACTCCTAACAACCAAAGAAAATCTTAACTGTCCTTTCTAGTCCTACACTCTACTGTAACTTTATTATAACCTATTTTCTACACACACATAATTTATCTCAACTCCAAATGT----CCCTCACACGTG---------------TTATCTCCTGTCCTCTAAAGTGCCTTCACTACCACGGATCTTCCACATACAAAGCATGTCATTATCTGTCTGGCTC------------CAAAGGTATGTTTGGCAA--GATGCAA--AACAATGAAGGAAACACATGGT----CCCTGCCCCCAAAAGTCG------------------------ACCAGCTA--AATAAATT---ACTTTGGGAGATTCAGTGATAGCCCTCTGACAGGAAGGCAGGGGAAAAAAATG-----CCTTCTACATTTTGAGAGTTGCTTTGTTTGCACGATGATTCCAAAACGATACGAAGAAAGAGGTCAAAGATTAGACAGCTCTTAATATTCTGCTCCACATGACCCCATCTCACTGCAGTACTCTCATGATCTGCTAATAATCCTTTATAATTAAGCTTCCAGCCTAATATTAAAATGTAATCCACATGAACACCAACCAGAGCATACAGCTCTGGAGTGAAGTGGTTACCACTTCAAGTTGTGCCTGGCAAGCACTGTGCAGTTTTAATTTAAAATCTTTAAAATATTTGGCCCTCGATGCAAAGACAAATTAAGTTTCACTTCTAATATACACAAATACAGCATGACACATCTACTTCAGAC .....xx:.::::...:.:.:..xx..x.x.x..xxx::x...xx..:..x.........:...:x---x.x:....x.x::x.....:x.:.....x.:x:.x:xx..x...........x..x::..xx.:.:.......x::..x....--:xx.......x-:......:::...:.......:..x.........:................x...x..--...:......xx.................................:x....................x......................x:................::::........x.x.......:..........:...............x.:::...............::....-....:x.....x................x:::x:...:.:x.x.xxx:...:.:..x:......:.:-:..x:::.......x..x.::xx.....x......x.x.xx:x..::.:..x::.::x.:..:.::...::.:.:---------------------.:x...x.xx:.:.::......----...xx::.....---------------....:..x.x.-------------.....:x:::.::.xxxx:x.x...x.:.x.xxx.:..:x...:...x....------------.x:.x::x....x.x...--..xx...--.:.xx.x:...:.x..:..x:.----.:.x::::.:..:.:..:------------------------....:.:.--..x:....---..::xx::x:..x...x..:..x.:.:.x:.-x:..:::..:........x.:-----....x..x.:::x.xxx::x.:.:xxx...x.x:.x...x:...xx:.xx.x.....x.x::x.::........:x....xx......x..:...::..:.....:..:...:..:...x....:.....................................:x:...............................:.:x..::..:xx.xx...x-.............:....x..:::...x..:...x..........:........x.x..:......xx.:...x...xx...x:x....x......x.x...::...---...x..:..:.......x:.:.x:...xx..:.:.. 66M3I83M2I11M1I58M2D183M1I67M1I75M21I22M4D12M15D11M13I52M12D18M2D7M2D22M4D18M24D8M2D8M3D31M1I21M5D216M1I107M3I36M 776/1132 68.6% 1179/94230402 0.0% 122/1132 10.8% 76466050 NA +10474 chr4 + 190214555 111744891 111744890 111745447 557 AAAGACTTCTTTAAGTGTTATCAGTCTTCTTGTTTTACTGCCATTTAGACCCAGATTTCAAAGGTCGATGAATTAGGCCAGCGTTGTTTAGATTATGTACCAACTACAAACATACCATAATGTGCAGGGCTGATAAGAAACATGATCGATAACCAGATAACCCCTTACAGCTGGTGCTTTTGAAAGGAAAGATGATCAAAAATGAC-CTAACATTTTCAGCATTTGTTTACAACATATTGATTAATTGTATAACAGTTAATGTATTCTAAACAGCATGACTGCTCA-AGCTGAAGTTGCTTTATGTCATT--ATTACCAAATAG----------CAACCCAGGGTGCTACAGGATTTTTTGTATTTCTACTTAATATATAGCTTCAATAATGCAT---CTTGCTACTTTTCTTACAGTCCGTTCTGAAA-----------ATAACGTATTCTTCACTGAGTAAATATGTCAAATACAAACAAAAAGTAGGT----CAACTTAAGCCCTGAAATATCTTAGGGCAAAGAAATGTATGAGTGTTTTTAAAATCAATTTACTCAGTATCCCAAAGGATCAAAGCTCTTTTTT chr4 - 94230402 35275717 35275716 35276281 58954122 58954121 58954686 565 AGAAATTACTTTTAGTGCTCCTCCTCTCCCTGCCTTATTCCCCTTTTTGCTTAATATCAAAAGGTTAATGAACCAAGTCCACATTGTTTAGATTTTGTACCAAGTACAAAGA-AATATGTTGTGAATAGCTGATAAGTGGCATGATCAATAATAGGGAAACATCTTCCAGCTGGTGTTATACAAAGGAAAAATTATCAACAAAGACTCTGGCATTGTCAACGCTGATTTGTAATATATTGATAAGTTGCAGATTAGTCATCGCATTTTAAACAGTTGTAATGTTGACCACTGAA----CTGTGTGTATTTGGATCATCAAACATCCTAAAACTCCATTTCTGAGTGTAATGGCAGCCCTCTAAGTTGTGCTTAATG---AACTTCTCCATAGCATAAACTTAGTAGCTTTCTAACAGACGTTTTTCAAACATTGCTCGCCATTACGAA--CCTAGCTCAGAAAA----GTAAGTACGAAAGTAAAG-AGGTGTTCCAGCCAAAAAGCAAGTATTTCGTAGGCCACTGAGGTAC---AGTTATTTTTAAATAAATTTTCTCAGCACTCT------TCAAGACTTCTATTT .:.:.:.x....x....:.x::xx...:.:..::...:.x..x...xx:.::.:xx.:x......::.....::.:.:.x:.:...........x........x......x.-.x:..:x....x.x:.........x::.......:....:x:.:x...x:...x.........:.x.xx........:..x.....x..x...-..::....x...:.::.x:...::..:........x.:...:.x.x:...:.x:.:...:.......:xxx.x..:.x.-x:.....----..x.:...xx..--..:.:....:.x----------..x::.x.:...:x.::.x.x:::.:xx.x..x.:......:---.:....xx:.xx....---...:x..x:.....x....x.xx..:.x...-----------..x...x.--.:.x:..x..x...----x:..:...:..x:x....-....----..:.:x..:xx.x::x..x..x....x..xx..::.::---...xx....x....x.....x.....:.::.:------....::..::.x... 112M1D93M1I79M1I7M4D12M2I12M10I42M3D16M3I31M11I8M2D14M4D18M1D4M4I38M3D32M6D15M 343/533 64.4% 565/94230402 0.0% 56/533 10.5% 76469174 NA +61541 chr4 + 190214555 111747249 111747248 111748636 1388 GTAGGGAAGAAGTAAACCTTGCCTTTCTCACTCTCACAGAAAAGCCTGCAGTTAAATGAAGGAGAACTGAAGATCTTCATTAGAAGTCATAGTGATTCCCACCA--CTTGTTTATGGTGGAGTTCAGATTCCCTCTCCAGGGACTGGTCTAAGCTTACCTCCTCCCC---TATTGACCTGAATATCTCGCCCTCCTAACATTAAAAGACCTGAGTGAATTTTCATCACATTTCTCAGGAGACTAAACTTAGTGGAACTTTGAAGCGTGCCTTGGAACACCATGCTTATGCAAGTTTTTTTTTCTGCTGTGGATTGTTGATGCTGCAGGAGCAGATAGACTGATGTGCCTTGAATTCCAACAAGGAGAAGGTAGTGTGTTGTTCT----------TTTTGAATAAAGAGTGAGTATTTTCAAGAGGCTTTTTAC-CTTAAGTTGCTCCGTTTTTC-TTCTTGATCAATTCAATGAGAGTCATTT-AAATGCCATGCAACATTAATT-TATATTTAC----TCATTTGAAAAC-------TTTGTCTAGTTATTTGCTCATATTGGAATCATTTGAG--GCCAATCTGTAAACAATATTCAAATTCAC----TGTCATGCAATAAGAATTAACATGTGTGC-ATACACATGTA--------TTGGGGAAGGC--------AGGGGACAAAGAAAAGGTAAATGA------TGGCAGTCATATTAGAAATT--AACAAAATAGGAGTTTTCATAATC-----AAATTA-----GACCTCACCCTGATAATTAGGAAATATTTATAAGCAATGATGTGGCTCAGGGAAATGGTATATATATTA-CACAGGCTACTTTAGAGGATTAAGACCTTTCAGTGTATCTGATCCATCTGCTTCTTTAAGGCCCACGTT-TTGGAGGAACTGCCATGTGATTTTATGTAGGGATGTTCATAACCTGAGTTCTTAAAG-CTGTGTATGAAACAGATTTTAAGAGATCCAGGCCTGATTAGAACAGTTAGCCTATTCACATCCTCCCTATTTACTGTGGATTATAGGAAGGGAAGTAGGGGTTAAATCAGCAGGTCTTCCTGTTTCCCCAGAGGTTAACCTGGCAGCCGGTTTGGCACCCACAGGAGGGCTGACAGGTAGCAGGATTTGTCTAAGCAGGCTGCCTGAGAGCCAACAAGGAAAACTGAATGCTCTGGATTAGTTCTGGATTATGTTGTCAGAGTGAAGGCTGACGGACAAACTGCAGAGGAATAAAATGCAATCTGTTTGGGGAGAGAGGCAGCGTGCATAGCTTTCATTTTTCAAGAAATGACAAGAAAAATCATTAATAATTTGTAAATCCATGTCCATTAACTTTTCTCTTTGTTATCCCAAGACAGTCTTTACAACATGAGTTTGCCACTGTCCTATATCTCTTCTGCCTAGTGACAGATGGCAAGATAGATATGAAATTG chr4 - 94230402 35277482 35277481 35278935 58951468 58951467 58952921 1454 GTGGGAGGGAAGAGCAATTTTCCCTTCTTCCTCTCAGGAGAATGCCTGAAATTTAATTGAGGTAAAATAAATGTTCTTATCAGAAGTCACAATAGACCTTCCCAGTTTTGTTTGTGGCAGAGTTCAGAAGCCCTCCCCATGGCTCACTCTA--CCTTCCCCCACTTCAGATATTAACCTGGACATCATGCCTTCCAAACTTTAAATGAGCTGTGCGATGTTTTATTACATTTCTCATGTGGCTAAGCTTAGTGTGGCTTTTAAGTGTTCCTCGGTATGCCGTGCTTACGCAAGTTATTTT--CTGCTGTGGATTGTTGATGCTTCAGCAGCAGATAGAATGATGTGCCCTGAATTCCAATGAGGAGAAGGTTTTGGTTTATTTTGGTTTGGTTTTTTTGAGTTCAGAGTGAGTATTTTGAAAAGATTTGTAACTCATATTTTTCTCTGTATTTCAGGCTTAAGGCATTAAAAATGACTTGTTTTAAGTGCTGCTTGGAAATAACTATGTCTTTAGATTGTTATTTTAAAATGCAACTATTTGTAAAGTGTATTGCTTTTCTAGAATTTCTTTTAGCTATTGACTTATGTTTAGTATGGATCTCCACAAAATGCTGATGAATGAAGAGAAACAGTAGAGCTCTGAAAAGGTAATTTTTATTTAAGTAATGCTTTGTGAAAGTGGATGAA--AGTGGTGGGTGAAAAGCTTGCCAGCAAGAGCCTGAATTGCATCTAAACTAGACTTTCTTTCATTGTACTAAATTATTTGTGACCTTGTCCTGGCAATTAGGAAA-ATTTATAAGCAATGAGGTGGGCAATTGAAGTGATGTGTATATTTTCTCAGACTCCTTTAAGGGATTAAAACCTTTCAGTGTGTTCTATCCATCTGCTTATTTAGTGCTTGTATTATTGGAAGCAATCCTTTCCTCTTCCA-GCAGTGATGCTTAGATCCCTAGTTCTTAAGGGTTGTGTATGAAACAGATTTTGAGGGATCCAGCCGTGATTAGAACAGTTAGCCTGTTAACATCCTATGTATTTACAGTGGATTATTTGAAGGGAAGCAGGGGTTAAGTCAGCAGGTCTCTCAGCTTCCCTAGGGGTTAACCTGGCAGCCTGTTTGGCACACACAGGAGGGCTGACAGGTAGCAGGATTTGTCTAAGCAGTGTGCATGAGAGCCAACAAGGAAAACTGAATGCTCTGGATTAGTTTTGGATTATGTTGTCAGAGTGAAGCCTGACGGACAAACTGCAGAGGAATAAAATGCAATCTGTTTGGGGAAACAGACAGCGTGCATAGCTTTCATTTTTCAAGAAATGACAAGAAAAATCATTAATAATTTGTAAATCCATGTCCATTAACTTTTCTCTTTTTTATCCCAAGACAGTCTTTTTAACATGATTTTGCCACTGTTCTATATCTATTCTTTCTTGTGACAGATGGTAAGATAAGTACAAAATTG ..:..:::....x:x.x:..x..:....:x......x:::..x.....x.:..x...x:...x:..x.:..x:.::.:..:........:.:.::x:.::x...--:......:...::.........xx.....:...x..x:::x....--.:.x..:..x.::.---....:.....:.:...x:...:...x...x.....x..x...x.:..xx...:..:..........x.x.:....:.......x::....x...:..x...:..x.::..:......:.......x....--.....................x...x..........x.........:..........::..........xx..xx..:..:.----------......:.xx..............x..:..::..x.x..-.x..xx..x...:..x....-xx...:.xxx...x..x:x..x.::...-..:...:::x:::x.x...:.-.:.x....x----.:....x....:-------.....xx...xxx.....:x.x.x.:.x.:x...x..--::::.::.:.:xx:.:...xx.xx.:...----..:::xxx...:.::.xx....xxx.x..-x.:x.x.x...--------..::.x..x..--------..x...::..--.:x...:::...------..x...:x.x.x:xx:....--.x.x...:x:..x...::x.x..:-----......-----.....:::....::..........-...............x....x:x.xx...:..:.:.:......x-.x...:..x.....::.......:............:.::x............x....:x..:::::..-.....:.x.x.x.:x.x:xx..::.-.:..x....:.:.x.x..:x.........:.-:...................:..:.......x.x...................:..x.......x:x.......x.........xx.........:.........:...........::.x.:.....:..:................x.........x.......................................xx...x.......................................:.......................x.............................................:.x..:.....................................................................................x...................x:.......x...........:........x....x:..x...........:......::..::...... 104M2I45M2D14M3I130M2D82M10I39M1I20M1I28M1I21M1I9M4I12M7I37M2I29M4I29M1I11M8I11M8I10M2D12M6I20M2I24M5I6M5I24M1D44M1I69M1I25M1D31M1I494M 1046/1380 75.8% 1454/94230402 0.0% 82/1380 5.9% 76469767 NA +16292 chr4 + 190214555 111761703 111761702 111762018 316 ATTGGGTCTTTT--GTGCACTAGTCAT--------TGAAGGTCATCCAAACCCTGCTCAAGTAG---CAGCTCAGAAATGCCCCAGTTGAAGAGGGCTTGGGAGGTTAATTCTGTCATTACTGTGTTGACATGAGGCATGTTGCAGCGTTCAGCGCAAAATGTTACTTGTAATCTTTTAATCCCAAATTAGGTCAATATTTTATCAAGTTAATCTAGCATGAAGATTAATTGTATTAGTTACACACACATATACACATGCAGGTTATTTGTTTTAGAAATACTTTTAATCAAAGAG-CAAACCTTAGGTTACAATAGGCAATTTTTCACC chr4 - 94230402 35283727 35283726 35284043 58946360 58946359 58946676 317 ATTGGCTTTTTTATGTGAAACAGTCTTCCTGCATTTACAGGTCATCCAAACTCTACTTAAGCAGTGACATCT----ATTGTACAGGTTTGAGAGGGCTTGTGGGGTTAATTCTGTCATTACTGTGTTGACATGAGGCATGTTACAGCTTTCAGCTGAAAATGTTACTTGTAATCTTTTAATCCCAAATTAGGTCAACATTTTATCAAGTTAATCTAACATGAAGATTAATTAGACTAGTTA-------ACACGCGCACAGAGGTTATTTGTTTTAAGTCTACATTTAATCAAGGAGTTAGTCCTTAA--TACAATAGACAGCTTCCCTCC .....x.:....--...x.x:....x.--------.:x.............:..:..:...:..---..x..----.x..:x.x:...x:..........x.:.......................................:....x......xx........................................:...................:..............:x.:......-------.:.::.:..::x...............::xx...x.........:...-:.:x.....:--........:..::..::.x.. 12M2I13M8I29M3I5M4D165M7D48M1I10M2D21M 249/303 82.2% 317/94230402 0.0% 27/303 8.9% 76477976 NA +13824 chr4 + 190214555 111762474 111762473 111762879 406 CTTAGGGGGTGGGAAGGTGGAGA---TATATTGATCCAAGTGGCATAAATCTGCTAACAGAAGTCATTAGAGACGACAAACGCCTTTCTCAC-TCAGTTTCTTAGATAAGAA----CTATCTGGTAGTTTAAAATTCCCAGGCGTCATTCTGGGTAGTTTTGCAAGCCCTGCTAAATGGCAACACAGAGTTCATGCCCTGTTTCATC-AATATCCAATGACATTCTCCAAAGGTTATGCTAATTATAAAGATTTCACAGACAATGTTTGAGATGATTACATTACATCTCAAAATTTTA-GCTCTTATCTTTAAATATTGGATTTCTGGCATTCTTTGTTAGTGGAAAATG-ATAGGTAAAAGGACCCAAGAATATTTTCTTGTGATTAGCCCTTTGA-ATTCATTAACACATTAAAAT chr4 - 94230402 35285099 35285098 35285497 58944906 58944905 58945304 399 CCCAAAGGAAGGGAGAGGAGACAGTTTGTATAGAAGGAGGTGGCATAAATCTGCTAACAGGGGTCATTAGACCGGACAAATGCCTTTCTCCCCTGAGTTTCCTAGATAAGAAGAACCTATCTAGTAGTTAGAAATTCCAAGA-GTCATTCTGGATAGCGTTACCGACCCCCCTGGGTGTTGCTGCAGAGTTCATGCCCTGTTTCATCAAATACTTGGTGACATTCACCAGGGGCCATGCTAATTATAGGGATTTAGCAGACAATGTCTAAGA-----ACATTTCATCACAAAATAGCATGTCTTTGTCTACAAGTATTGGTTTCTCTATCTGCTAAGTTAGCAAAAAAAATGGAGGTAAAATG-------------TTTCTGCAGTTTGTACAACAACATTAATCAACGTATTGAAAT .::.::..:x....::.x:..x.---.:...x..xxx.:.....................::.........xxx......:.........x.-.x......:..........----......:......x:.......x..:-..........:...:x..:.x::...:x..:::..x::x::.......................-....:::::........x...::..::............::.....x:..........:.:...-----.....x....x......xx:.-.:::..:...x:..:......x..:::x::x.x..xx.....:::....x:-:x........x.-------------..::..:::..x.:x.xx::.-...x..:...::...:.... 23M3I66M1I19M4I26M1D64M1I64M5D21M1I51M1I12M13D21M1I20M 274/387 70.8% 399/94230402 0.0% 31/387 8.0% 76477375 NA +15532 chr4 + 190214555 111775867 111775866 111776353 487 GACATCAGTCTTGACAGTGTT--GGAGAGGCAGGTTACAGAGTCCCCTGGTGAAAAGGTACACAGAGCAGTGATGC--CATAGGTTGAGTTACCTCATAGCTAAGACCTGCCCAGCAAGGACCGGAGTTAAATATATGTGCTGATAAATGAAGTAATCGTTGATGTTCCAGGCAAGTGTTTCCAAAGCTGGGATTTTACTGGATCATATCAAATGAGGGAGGAGACACAGATGTATCTTCCCAA--CTGGGAGGGGG-GGAACAGTGTTACAGCTCAGAAGGAAACTATGTGTGATGCATATGTGCTCAG-TTACACTAAGATGCCTTT--------CCTTTTCACATATATCTAGAATATGCAATTTATTTCAGTGTTTATGTATTGCTTGAT-------------------------GTTCTATCAACTTGGGAAAAAAAAGTGAATGTTCCTAA------AAATGTCTTCATGGAATGGAATTATAACTTGTTTGTTTAGATAACTTTTGTTTATCTCTTTGAGTTATTCC chr4 - 94230402 35302688 35302687 35303204 58927199 58927198 58927715 517 GAGATAGGTTTTGACAGTATTATGTTAATGCAGGTCTCAGAGC--------AGATAGCAACAGAG-GCAAAAATGCTGCATAGGAAAAGTTACATCATTACGCACTCCTACACAGTAAGTTTTGTAGTTAGATTTATGTGCTGAGAAATCAAGTAATCGCTGATGTTTCATGCGAGTGTCTCCAAAGCTTGGATTTAACTGGATCATATCAACTGAGGGAGAAGAAACAGAAACAGCTTTCTAAAGCTGGAAAAAAACAGGACAGGAGTACAGCGCAGGAAGAAATGATGTGTGATGCACATGGCATCTGATTTCAATATGATGACTTTTTCCGCCCCCTTTGAAAATGTATCTGGAGTATGCCATTTGTTTTAATGGCCATGGATTGCTTGATTATTAAATTAAGCGTGACCTCTCTGTTCCTATCAACTTAGAAAA-------GAACTTTTGTAACTTCATAGATGGATTCTTCAAGTTGATCTATAATTTATTTATTCAAATAATTCTTA-TTAGCTTCAAAATTTATTCC ..x..x:..:........:..--.xx:.x......:x.....:--------::.x..xx...x..-...:x:....--......xx:......x....x:.xx.xx...:.x...:...xx::.x.....:..x..........x....x.........:.......:..x..:.....:.........x......x...............x........:...x.....x::.x...:.:..--....:.:::::-:.:....x:x......x...:.:....:x............:...xxx..x.-..x..x..x....x....--------.....xx.x..:.....:..:.....x....:...:.:..x::...x..........-------------------------x.:..........:.:...-------...:x..:x...------.:...xx...x.x:.:.x..x:.....:..:...:..:.:....:.:..:-...x..::xx:.x....... 21M2I20M8D14M1D10M2I166M2I11M1I52M1I18M8I57M25I19M7D12M6I50M1D20M 339/470 72.1% 517/94230402 0.0% 64/470 13.6% 76473179 NA +5476 chr4 + 190214555 111778742 111778741 111779383 642 GAAGAGAGTCCACAAGGCAAATGCTGCCATCTAGAGAGGCAGAGAGGAGAACATGCTGACAGTGGTAATTTTCCAAATAAAATTAGAACAAAAATAAAAACCCTTGTCAGGCAGTGAGTGTGAAAATTTCCCAAGAAGAGATCATCCCTTTGAAGAAATCAGC-------ATTTCATTAAAA------GGTGCCATTTGGAATCCATCTAATTTGAGATGAAAGATTATTCTGCTA-------ATAATTCC-----ACATCAGGGAACCTACCAAGAGATTTTTTGTTGTTGTTTAAGCAGGGACTTTTAAAGGTGATTTTCCTAAGGCTGAGTAAAATAACTGCAT-------GACAGCTAA--------------TTGTTTGACCTG--------------TCTAAAAAAGAAATGAGTGTGTAACTGTGTTTCTGTTTTACCTTGTTTAAACAAACAAAAAATAGCACAAGGAAGTTGAATTATCTGAAGTATACTGGTCAGTTTACCTCTTTTTTCATGATACCGTGCAAAGACATCCTGCTTGCTCTCTAAGAGGCTTTAAACAAGTAGGAATTGCAAAAATCAAGCAGAGGCACA---ACACAAACAGACGGCTAAAAAATACCTGAAAAATCAAGGGGAAAGACAGGGATCTAGCTTGTCTCCACATATTACATGTGCAGAAATTTAAACAACTCAAT chr4 - 94230402 35305313 35305312 35305917 58924486 58924485 58925090 605 GAGGGAAGTCCTTAAGGCAAATGCTGCCATCTAGAGAGAAACAGA-AAGAAAGTGC--ACAATG--AACTT----AGTGATAT---------------GATTTTTATC-TCCAGGGAG----------CCCCAAGAGGAG-------CTGGGCAGGAGTCTACAGGACGGACTGCAGTGTAAGAGCTGGGAGCCAGTAGGATGCCATTCCAGC--AGCTG---------TCGGCTAGAAATAGGTAATTCTCAGAGACACTAAGAAAAAAAGCAAAACA--------------CTGAGAAAACACTGAAAAAAAT-ATATACCAAAGGTACAGTA-------TGCCTTTTCGTAGGCAGCTAACATTGCTTCAGGAGTTTTTTTCCTTGCCTTTTCCATTTTTCCTAGAAAAG-------------CTTTTGTTCTAAGTTTATTTTGTTTGAAGGAAGAGA----TGCAAAAGAAGCCCGTGTTATTTGCTGTCCATTGTTCATGTGCCTCTTTTTTTCATGTCACT-----AAACCTCTCTCTTTACTCTTCAGTTGGTTTTGA--GAATTAGGATTGCAAAACTCAAATAGAATGACAAACACACAAAGAAGCCACT-GAAAATACCTGAAAGACAAGAAAGAAAAGTGGGGATTTACCTTGTCTCACTATATTGTGTGTGCAGCTATATAAACACCCCAGT ..:.::.....x:.........................:x.x...-:....x:...--...:..--..:..----.:.:.x..---------------:.:::..:..-xx...x...----------:.......:...-------..xx.x..:.:..x:.-------.:.x..x.:x..------..x....x.x...xx....::x.x:--..x..---------..x....-------:......:-----...::.:.:..xxx.x...:.x.--------------:.:..x.::x...xxx...::.-..x.x..x....:xx....-------...x.-------.:.......--------------..x...xx.:..--------------:...:.....-------------x:.x....::x:x....::......:..x:..x.:.----x...x...:.:x::.x:....:..xx..x:.:..x...xx.xx.:::..........x:..:-----..:x.x::..x:..:....::.:xx..:...:.--:.:.x:.:.........x....::...:xx...---.......x.::.x:..-:.............:.:x.::::....::::.....:..x........xx:.....:::.......xx..x......x.:..:. 45M1D10M2D6M2D5M4D8M15D10M1D9M10D12M7D16M7I12M6I25M2D5M9D7M7I8M5I23M14D22M1D19M7D5M7I9M14I12M14I10M13D36M4D62M5D33M2D33M3I16M1D84M 357/542 65.9% 605/94230402 0.0% 163/542 30.1% 76473429 NA +9122 chr4 + 190214555 111784209 111784208 111784441 233 AATTCATCCTTACTCAGGGCTGTTTCATGATGTTAT--------GACCAATGTTTGGTTTTGCTTGTTTCTGTGCCGTGTGAGTTTAATGTTTGTTTTCTATCTATCATGATTTTCCTCTCCTCCC-CATGATAAACTCTGCCTTCTACTAATAGTATCAGTTACAAAAAATTAACCAAGCTAACTTTTA-TGGCTTGTTTTCTCAGACTACAAACATGATGAGATGAGATGCACCCCTGACC chr4 - 94230402 35310103 35310102 35310339 58920064 58920063 58920300 237 AATTACTCCTAAACCATTGTTGTTGCCTGATTTAATTGTCTAGTGACCTATGCTTGG-----CTTCTGTTTGTGCTGTCTGCGCTTCATGTTTGGTTTCCATCTATCATGATACTACCATTCTCCTAAATGATAAACTCTGCATTTGGCTAATAGAAAGAGCTAT-AAAAATTAACCTAGTTAACTTTTATTAGCTTGTTTTGGTCAACTACAAACAGGGTGCGACAAAACGCACCCCTGACC ....xx....x.x:..xx.:....x.x....x.x..--------....x...:....-----...x.x.:.....:..x..x.:..x.......x....:............x:.x.:x.:....:-x..............x..:x:.......x.xx..:..:-...........x..:.........-.:.........xx:x:..........x.:..x..::.:.:............ 36M8I13M5D64M1I38M1D24M1I52M 171/227 75.3% 237/94230402 0.0% 16/227 7.0% 76474106 NA +25294 chr4 + 190214555 111786321 111786320 111788367 2047 TTCCCCAGCCTTCCTACATCACTAAAAAATATTTGTGTAGTTTTATG-CATCTTTCCAGAGAGCAATGAATAGGTTAGATCAGCAACTGACTTT--ATCCACTGACATACAGACTGACTGATGGAAACTTCTAACAGGCTTAAGACTTTAAGCCTTGGTACAAGGGTTTACATCAGACCCTTCACAGAAGAGGAAAGCCATTTAATCCTAGAAACTTGCTAAACTTCCTACAAGACAAACCAG-------------AGATTTTGTGTATTCTAT---TAATTCAAAAAAAAAACAGT---GAAAATAAGACTTTTATATCTCTGCGCATTCACATTTCTTTATTCCTGTATAATTGTGTATTGGGAAAAACAAGTTCTTATGATTAGTGGCAAGTGGCACCCCAATTTTTCTCTGTACCGTGTGTCATCCCTCTTTTCCTATTAAGCGCTACTGCTTGCTTGGGTTCCTGACAATAATTGCTACCA--CTTCATTCTGAA--ATGATGTGCAGGTTAAAAAAAATATAGGAGAGAGAGAGAATGCCAAAGCACACTATGCTTATCCTCCCAAAAGCAAATTCAAAGGTTTCATAATTTAAATAGAAAGTGACTGGAATTCACATTTGCCCGCGTGCTTTTTATTAAATTATTGAAAGCTTTTTTTAACTCTGCATTTTAAAATTCTC---AACTCCAATGTATATTTTCTATGATTTTGTACTGAATGAGAAAAACCTCCCAAAAGATTGCATACCAAAGAGCAGAGCCGCCTGTTCTGAGATTGATGTATGTTTATGAGGAAATCCAGCATGCAATTTTCAAAACCTGCAGGTTCATTGTAAGTTAAACCATGTGGCCTCCATTCGAATCATTCCTTCCTTTCAAAATCACTCATCAGAGCTCCCAATTGCCCTCTTCTCTTGAATCGTTCTGCACTGATTTGCTCCCGCCAGACCCCAGCTCTGTGTCTGTGTATCCCATTGCGGAACGTGGAGCTCAGTAACCAGGCATCTTGGTGTCTCCTTCTGTCACTGAGGCACCACTACAATGCTTTTCAAACATTGTACTTCATTTGTTTGTCTGTTACTCTTTTTCATTTTGGATAAGAA-ATGTATAAACAAAAAAGAAAACTTTCCTCAA--AAAATATAGAACATATTTTATATGTGCATCAAAATA---------GCCTGAAAGGGCTTGGTAA-AAATACAGATTCCTGGCTTCTTTCTAGAACTTTTGAATCAGAACATTGTTGGGTATATATGGGATTTGCATTAAATTTGAGAACTTATA---AGGACCCTAATAATCATTTCTATCACTTCTATCTCATTACAAGAATAAGGAAAATACTCTTCAAAGGACAGAGTTCTTTCCATAA--------CAAAGCATACGCATTTTGAAAGCATGCCTTGCAGAATAAATTAAGACCAAAAATATCCAGCATCTAGCAGATGTCAAAATTTTAAGTGCTATGCA---ATATGTCACCAGTAAATTTTTAAAAGAAAAAAATTTTAATAGAAAATGCAGCTATTGCTTTATTACTCGATTTTTAAAGTCACGGAGTGTCGTAGAAAGTCTTAGGGTCATGTGTCATCATTTAAAAATGATTTCAGACCTTAATTCTCAGACAAAAGAAAT-AAAATGTAACT----TCAAGAATTTGCAA--------AAAATATTTTTGTGGGTTCATTTTCACTGTGCCTAGGCCTCATTCATCTCGGGATTTGCACAGGAGCCTGCTGGAGGGTCTCAGAGTTATTAAGTGACAATCTAAAAGCCAATTTAGGATTAGCCAGTTTAACCAGGTGAGCAGAGGGTTTCAC-----TTGGGAAAGCAAGCAGCAGCCCTGC-CGGAAGTCAGGATTGGAAGGCTGAAGGGCTTTACTAGCGCCCTGAGAGCCGCGCGTTCCGAATGGGTGCGGATGGGGGACCTGGCTCATCAGGGAGGGATTAAC-GCGGCTC-GGGCAATCCTGCGCTAAAGCCCGCTCCCCCCGCCGCCAGCAA--CGCCGCGGAGC-------CGCCGCACCAGCAACATAAATATTAGATGAGACTCTCCTGTGTATTAATTAGCACTTTCTAGGTGATCTTGTCATTGAATA chr4 - 94230402 35312248 35312247 35313983 58916420 58916419 58918155 1736 TTCTCCTCCCCTCCCCCAGCATTACCAAAG---TCTCTAGTCTGATGGCATCTTTCCAGAGAGTGATGAACAGGTCAGATCAGCAACCAACTTTTTATCCATTGACATACAGACTGACTGATGGAAACTTCTAACAGCCTTAAGACTTTAAGCCTCAGTACAAGAGTTTACATCAGACCCTTCACAGAAGGGGAAAGCCGTTTAATCCCAGAAACTGTTAAAACTTCCCACAAGACAAAATAAACTACTGTGGTATAGGGTTTGTGTATTCTATTTATTATTTCTAAACAATTCGGTATGAAAGATAATAAACTTAGATCTCTGTGTGTTT-----------TTTCTGTTTAATCTGGCATTGGTA--------CTTGAGTGATCTGCCTCAGATGGCA---AGACTTTATTCTCTGCCA--------CTCGGTTTTCCATGTGAGTGCCTTCAGTTGTCAGGTAGCATTGGGAATCTTGCTCCCATGTTTCACTGCAAAGGATGGTGT-----TTAGAAA----------------------GCCAAGTAATACTGTGTT-------------ACAAGTTC---------------------------------AATTTCCAGCTGTCACTTAGTTTTAAAGCAAA--ATTATAACCTTTTTT----TTTGTATTATTACCTTACCACAAATTCCAGTATGAGATTTCAA--ATCT--------ATGAGAA------TTCAAAGGAAT---TACTGTACAGTA--------TGATCTG--------------------------------TGAAATTTCAGAAGCCT-------------------AAGCATG-AACCTGCTTCCGCAGCA---CCTACTGTCTGCTT--CTAGTAAGAGAT-GCAATAG-----TTATCTTG---CATTCTG------------CTTGCCAGTCTGCGGCCACAGGTACATTACTGCCAGTCTGCAGCTGGTCCCAGAATGAACGGACAT-----GGTTCCCTTC-----CAAAAGCA-----AGAAGAGTTTTCAG----------CAGTTTTTATATAGGATGCTGCTCTGGGGATTGAATGAGAGCATGGCAGTTTCCTAAAGGATACTGTCATCAATGAAAGACTTTAACTTTTCTAAGAGTTTTGTCAGAAGACAGTGCCATACTTTAGGGAGCTCATCAATAAATTCAAATTGCTCACATATTTTTAAAACCAATGAA----------------TATGTATAAG--CTACAGCAACTTTTCACACCTTTATTGAAAACTCTAA--------TTTCTCATTATTATCTACCCACACATTCAAAAAAGA-------CAAAGAACCAAACCCTTCTCGTAAGCCCCCTCTACATCATTTGCATT-----AGCTTAC----------AGCTTAATACGTA---------------ATCATATGTCATTATCTGAAAT-CTAAGTAGGCATACATCACCA--------TTTAAAGATGTA---TTTAACAGA------------------ACTGTCCAATTCTTGAC-----------------------------------------------------------ATCTTAATTCTCACTCTAAAGAAATAAAAATATGTCTTAGATAAAGAATTTGCTGTCCACTTTTAAAGCTTTTTGTTTGTTCATTTTCACTCAGCCTAGGCCTCATTTACCACAGGATTTGTGCGGGATCCTTCTGGAGTGCCTCAGAGTTGTTAAGTGACAATCTAAAAGCCGATTTAGGATTAGCTAGCTTAACCAGGTGAACTGAGGGTTTCACTTTGATTGGGTAGAAAAGCCGTAGCTGTGCTTGGAAGTCTATATTGTGATACTGAAGGGCTTTATCAACATCCTGAGAGGAGTGCATTCAGAATAGGTGATGAT-GCGAATCTCACTAATCAGTGAAGGATTATCTGAGGCTCAAAGCTCTACTGCTTCTAATTCC-TTCTTCATGACGCTGTTCATGCACTGCAAAATGATCTAGTGCAACACCAGAAGTATAAATATTAGATGAGGCTCTTCAATATCTTAATTAGTGCATCTGAAGGGAGC-AGTTCTTGAACA ...:..xx..:...:x..x..:..xx...x---.x.x....:.x...-...............::.....:....:...........::.....--.....:...................................x.................::.......:.........................:........:........:.......xx:x........:..........x:.:-------------..:x..............---.x...:xx...x..xx.:..---:..:....x.xx:...x.......:.::..:-----------..:....x....:xx.:.....x.--------:.:xx:....:x.:xx..::.....---x:.:...x:...x.:..:--------.:.xx......xxx.:..:..:x:::x...::x..xxx.x.x:x:.xxx.....x...--:....:.x::..--...:...-----...:...----------------------.....:xx.:...:..:.-------------:...:...---------------------------------....:x..x:..:.xx:xx.:...xx.x:...--...:x..x.......----.:..:...x.x.xx..x:.---..:....:.:.:x:x....x.--..:.--------.......------::....:..x.---...::x.x..:.--------..x....--------------------------------..x.....:x:..:...-------------------..x....-::...x.x.:..x.x..---.:.x..x..x:xx.--..x:.x....x.-x....x.-----..x.....---.:.....------------.::.....x.:x.:..:x::x..x::.xxx.x...x.x:.x.:.xx.xxx.xx.:.:.x.:.:...-----x..::.....-----.x:.:...-----.x..x:x......:----------:x:...x.x.:.xx.x.:..x:.:.xx:xx...:..:...:-...xxx:xx:xxx....:.x...x..x....--...:xx.xx...x.x.:.x.x.xx.x::...:..x.---------:.:.x.::.:...::x:..-....x..:...x..x:.x.x...:..:...:xx....----------------...:...::.--:.:..x:..x...xx:x..:.x..---.::..:....--------.:.x...:.x:.....xx::...x:xx:..::..:.-------.....:..x:.:::...::.:...--------:.x.x...x:.....-----...x.:.----------.:x....x..xx.---------------.x..x......xx..:.x..:.-...x.:.---...::......--------..x.....x:x.---.....:...------------------.:.:::.:...:..:.x-----------------------------------------------------------.:...........xx.x........-.....:.:x..----.x..........x:--------x...xx.......xx.............xx..............:.:.x.:.......::.:...x...x......x.:.........:.....................:.............:..:............:.x...........-----.....x.::x....x.:...:x...-:.......x:x....x:.x:.............::.:.::........xx.:..:...x....:....xx...-.x.:.:..x:..x.....x..:......x.-.x.....-::..xx.x....x::x..x:..-:..::.x:.x...::x:x.--.:.:..::.::-------:..x:......x.::................:....:.x:.:.x........::.x.::x.:.x..x.-x..:x.....:. 30M3D14M1I46M2I147M13I18M3I20M3I31M11D24M8D25M3D18M8D58M2I12M2I7M5D7M22D18M13D8M33D32M2D15M4D19M3I21M2D4M8D7M6D11M3D12M8D7M32D17M19D7M1D17M3D14M2D12M1D7M5D8M3D7M12D66M5D10M5D8M5D14M10D41M1I31M2I36M9I19M1I37M16D10M2D24M3I10M8D36M7D24M8I15M5D7M10D13M15D22M1D7M3I11M8D12M3D9M18D17M59D25M1I11M4I14M8I154M5I25M1I73M1D30M1I7M1I22M1D19M2I11M7I68M1D12M 1123/1650 68.1% 1736/94230402 0.0% 483/1650 29.3% 76474073 NA +21011 chr4 + 190214555 111792526 111792525 111793974 1449 AGTTTTACAATGAAAAGAAATGAAACTG-CATCATAAAAAAATGGCATTGTGAACATGTATAATACATTTCCTTTTAATACTATGTT-GAAACTGAATAGCAACAGCATCCTTTCTCCTCTTCCTTTTCATGAAAGGTACCCAAAGAGCCCATACATCCAGGTAGCCTTCAGATATGGTGTCAAACAGCCCCTTTTTCTGTCACTCCCTGATGATGAATGAGGTTCTTTTCCTAAACAAATAAGCACTTCAGAGGGTTACCCTTGACAGGGTTGTTAATCCAGACAGCCTCTCTTATCAGTACAGAATTCAAGGGCTGAAGTTTTACAGGATCCCTGCACTGCCTGGCTCTTGGGCAG------TTGTCTGGAAACTGCTTGGCCCATGGCAA---CGCTTTT--CAAAGAACAGCCAGGCTATGCCCTTCTCTTCAATGTTCCCTCTGCTTTCAAATCTGGTCTTCAGCTAACTAGAGATTTTTC-TCTTAGAAAATTCAAATCAT------------TTGTATTGTACTTTCAGCAATGAGTTAATATGCTAC-ATTAACATAGTTTT-------TATTTTCTCTCCAGAAAAGCAATTTGCCAACATAAATTTTAGTTCATGCAAAGAAATAAAAGGGAGGTTAAATGACTGGTTCTGATCTTACAAGAGCAGAGCTAGAAACACTGCCTCTGGATTCC---AGTA-TATGAAACA-CAGGGACAATC---TCCACCTCTTATCAGCAGTGTATAAATTTTTTAACCAAAACTCTCTGGCTC---TTGACTTTGCTTCCATTGACATCTAGACTAAAGGTCAGCATTTCTTTTGCATTCCAGAAGCTATTAGGAATCAGCTTC---AACTTATATTCCTGTTAAGAATTGATGAGTTGACCTTAATTCAATGAGGTTCAACAAATCTCTCAGTAGCATCTCTCAAAA-------TATTGTGTCCAGATGATGGTTGAGAAATCAGAAATTCTTTAGCTAGCATATACTCTCTTGATATTTTAAAAGTATCAACGTATATTTTTTCAATAAAAGTAACAAGTTTAAAATCAGTTTTGCCTCTGAAAATGATTAGCAGGAACTTCAG-ACCTCCTTCTAACCTCCTCTGTTCTTCCATTCCCACAG------TGTAGCACCACAAGAGATATGTAGAAATAAAGAATGCATATTTTTTT-ATCCCGGTCACAAGCCTAATGTCTTAAAAGGTTTAGAAAAGGCATGTGACA-AAGC--CTGTTTGAAAAGCAGAGCATAATGTGTTTTCAGTTTATAAATTATAAAATATTCAACAGCACAGGCTAACACCAAGGAATTGGTT--ACTGCTAGATATCTGGAACTGTTTTTTCTTTCCTTCTCTCATG----------------TGCTTGCTCTTTTTTCCCATTAAGAACAAAATGCAAATCAAATGCAAA-TGAGATGCCTTAGGCTTAG--AAGACAAGAAGGAAAACAACTGTGCCAAAGAGAAAA------------AGAACACAGGGGGTCCCTATGAATG chr4 - 94230402 35315315 35315314 35316638 58913765 58913764 58915088 1324 AATATTTCTATGAAAAGTAATAAAATAAACATCTTACAAACCAAG---------------TAATGTATTTCATTTTAATACTGTTTTTAAAACTAGATAGCAGCG------TTTTATCTCCCACTTTCTATGA----TACC--AAGAGAACATACATCCAGGTAGACTTCACATATTGTGTCAGAGGGCTTCCATTTCTATCACTCCTTAATGATGAATGAGGTGGTTCTTCTAAACAAATAAGCACTTCAGAGAGTTACCCTTGACAGGACTGTTAATCCTGGGAGTCTGCCTTATCGTTGTAGAATTCAAGGGCTGAAGCTGTACAGTATCCCTGTACTGCCTGTCTCTTATGCTGCCTGCCTGGCTTGAAAGC----TGGGACATGGCTATTTCACTTCTGGCATGGA------AGACTATGC--------TCAGTG---CTTCTGTTCTGGTGT---GCCTGCAGATAG--AGGGGCTTATCATCTTAGCAGGCACTGGCCCTCTTAATATCTGGCTGAATTTCTCATTCAG------ATGGATGTGTTGTGATCAGCCTGCTTTCAGTGATGTATTTCCTTTGCAG----------------------TCTTTCTTCACTGAATGCAATGAA-------------------TTTTGGAC-TATAATA-CAAAGCT------------------TTCCTTGAGTATTATGGAACATCAAGGCGAGTCAGATCACACTCTTTTCA------CAAAAATATTGAAGATACAGCCCTTAAGCACAATAGGACTTCAC--------------------AAAATTGGCAATT--------TTGAAGAAATGAAAAAAAATCTGTCTTATGATTTTGCATACCTGGCAGCAGCTATGGTG-----CTTAAT---ATCACCTT---CCAATCTATAA--AGCATTTCGAAAGAAAAAGCTTATGGTGTTATTCTGGTGATT----AATGGTAGAATCTGGA-----CCCATTTTCACATGA---TTGAAAACCATTATCAAGTAGCCTTTCAA----------ATTTCTTTCATCCTTTTT------------------------CTCCATCACCTCC--CAAATCTCTTCCACACTACC--TGCCATGGGAAGTTTGGAACACCACCAGGATCATTTGAAAAGAACAAGTGAATATTTTTTTCAGTCCTGTCAGACTTCTTATCCCTTAGAAGGCTGAGAACAGGCATATGACATCAGCTGCTGTTTGAAAATCAAAGCATAATATGTTTTCAGT-------TTATAAAATATTCAAAAGCACAGACTAACTTTAGGGAATTCGTTACACTGCTTGATAGCCAGAGCTGTTTGTCCCTTTTATCTCTGTTACTTCCCCCCATTCCACTCTCTCCCTTCTTTTCTTCTTAAGGGTAGTATGCAAAGAAAATGTAAATTTTGATGCCTTGGGCTTTGGAAAGATAGGAAGAAAAAAGATAATGCCAAAAAATAAATAAGGAAGATGGGGTGAATAGAGGGTCTCTTTTGATG .:.x..x.x........x...:...:x:-....x..x...xxx:.---------------....::.....x..........:.x..-:.....::......:.:------...:x:...::x....::....----....--.....xx...............x.....x....x......:.x:..::.:x.....:.......:.:..............xx..:.:.......................:...............::.........x.:x..:..x:......:x.::..................:.x.....x.......:........x.....:x..x.------.x.::..:..:.----...xx......x.---.:...:.--..x:..------..:......--------...:..---.:....:.:.x:x:.---.:..x...x..:--..:.::..x..-......x.:::x.x:::.x.------------:..x...x:x.x.....------:.x:..:..:.::-..:.:.x.:x...:-------.....:..:.x...----------------------.:..xx....:xx..x.x...:..-------------------..:..:x.-..:..x.-..:....------------------....---....-....:....-..:..xx.:..---..xxx.....x...------:.x....x..xx.:x:.x.:.:..:x:..x.---xx.....::.--------------------..::.::...x..--------..xx....::x.xx.::....x.::.:---.x:..::..x....x:.:x.::.:xx.x.-----......---..x.xx..---.x.....x.x.--.....:..xx..:.-------...x....:xxxx..:..:..----...x:x.:.x...xx.-----.x:..x:..x.x...---..x....x:..:.x.:x:..x::......----------.xx.:.xxx...xx....------------------------..:..x-......--.x..:...:..:::x..x..--.x...::.------..x.:......x..::x:..x.::...x..x:.:..x..........-.x:..x....x.xx:..x..x:....:....:.x....x......:.....-x...--...........x..:........:..........-------...............x.......:.....x::.:......x...--......x....x.::..:......x.:.:..::x.....xx.:----------------.x::.x.::.:.....::x.....:::.:x.......xx.....:...-.xx........:.....x.--....:.:....:....x:.:x:.......:.:x...------------:.x:x.:..:.....:..x.x:... 28M1I16M15D27M1I17M6D22M4D4M2D215M6I12M4D13M3I7M2I6M6D9M8D6M3D15M3D12M2D11M1I20M12I17M6D13M1I14M7I14M22D24M19D8M1D7M1D7M18D4M3I4M1I9M1I11M3I14M6D31M3I10M20D13M8D27M3I29M5D6M3D8M3D11M2D14M7I21M4D16M5D15M3D29M10D18M24D6M1I6M2D20M2D8M6I47M1I51M1I4M2I34M7D44M2I43M16I48M1I19M2I36M12I25M 854/1225 69.7% 1324/94230402 0.0% 323/1225 26.4% 76477211 NA +38715 chr4 + 190214555 111797464 111797463 111798102 639 CTAAGTAAGGAATAG-CTCAATTTGCTACA-AGTAACTTCTCCATGCATCACATTATTCTCTATTAAAAAGTCTCAAAGCACAAATATACATCTGCATTGATTGGATATTCATTCAGAGACCTTTTACCTGGCCTCTGTTTGTGTGGCTTCATATCTTTATGACATGGAATGAACAGCTTGGCGCCACGTTGCTGTTATCCATTAACCATTCCTGTTTTCCTAATCATCTTTGACTCCATCTTTCTCTGTCCTATCTGTTATTGTCTTCGGAAAAGAGATGTGAGGTTTCCTTAGCCTGTTCTGGTTTACGTGACATGATTTGTGTATCTGCCTACAAGAGTTTCTCAAATGAACCCTGTGCATTATCTTCTTTCCCCAACCCCTCCTCCTCTGAAGAAAGAAGAAAAAGGTCATACATCTGTAAAATGACAGCACTTATGAAAAATGAGAGTTTGGCCCACATGGCTCTCATCAGACACAGACTCATCTGCTGTGCCACAGACTCTGCTCATTTCCTTCAGAATCAGACTGCAGTT--AAAAACAGGAAACACCTAATAAATTGCCCATACTATCAAATTAACAAAGCATAAGGAAACTTTCCTAGGTAATCAATGAGT--------ATTGCTTGCTT--------------AAAAAATGCAAG chr4 - 94230402 35319998 35319997 35320657 58909746 58909745 58910405 660 CTAAGAAAACAAAAGGCTTAATTTGAAATACATTAATTTTTCCACTGTCTGAATTATTCTCTGTCAAATATACTGGGAACACAAATCTGCATCTGCATTGATTGGATGAAT-TTCAAAGACCTTTTACCTGCTCTCTGTTTGTGTTGCCTCATATCTTTATGACATGGAATGAACTGCTTGGCGCCACGTTGCTGTTATCCATTAACCGTTCCTGTTTTCCTAATCATCTTAGACTCCATCTTTCTCTGTCCTATCTGTTATTGTCTTCTGCAAAGTGATGTGATGTTCGTGTAGCCTGTTCTGGTTTGCATGACATGATTTGTGTTTCTTCCTACAAGGGTTTCTCTACTGAACCCTGTACATTATCTTC---CCTCAGCCCCCCCTTCTCTGTAACCAGGAGAAGAGGGTCATACATCTGTAAAATGACAGCACTTATGAAAAATGGGAGTTTGGTACACATGGCTCTCATCAGACACAGACTCATCTTCCATGCCACAGACACTACTTGTTTCCTTGCAGTGCAGACTGGAGCTGGAAACACAGGAAACACCTAATAAATTGCTTGACCTATCAAATTAACAAGTCATCAAGAAACTATTTT-GGTAATCAATGAGCAAAGCAGAATTGTTTGCTTTCTGAAAGAACAAGAAAAAATGCAAG .....x..:x..x..-..:......xx.:.-.x...:..:....:xxx:::x..........:.:...x.xx..x::.:.......x.:..................:xx:-....:..............x:............x..:..........................x................................:......................x.....................................x.x....x.......x...:x:x................:.:...............x...x........:.......x.x..........:..........---..:..:....:...:.....x.:xx..:....:.:.......................................:........:x...............................x.::..........x..:..::.......xx::xx.......x..:.--...x.......................:::xx...............:x...x.:......x.::.-.............:--------....:......--------------............ 15M1I14M1I80M1D259M3D163M2I66M1D14M8I11M14I12M 532/634 83.9% 660/94230402 0.0% 31/634 4.9% 76477466 NA +20814 chr4 + 190214555 111807394 111807393 111807992 599 AATAACCACTTTAATTTACAAAAGCCAGTTCTCTGGCATAAACTTTTTTCAGACACAGACACTTCAATAT-TTTCAAGTTTCCCAGTCCCTTAATTGTTTAACTCACCCAAGTTTTAGCATATTACAAAGAGAAGTTGC--ATTTAACAGATGTTCATTTCAA-AGACCTTCAGAACATTATAAATTATGATAAATTAATTTCCTCATTTCACAGTTTGACAAAGCAGCTCTGAGAGCTTGCCTTGGTCTAT--ACTAAAGGGAGGGAAGAGAAAAAAGCAGGAGGTCGGGATCCCAGGAAAAGG---AGCGTCTCTTGACTCAGTAAGTGGCTCTGTCACATAAAACTCATGTCGGCT-CTTAAGGAGCCAAGCCAGCTGTATCCAATGTGCCACAAATGCTCTGGCCTCTTTTTTCTCCAGTTCAGTTATTGTGTCTATAAATT-CAGCGGGCCACCTGTGCAATGTGCTCATCCGAAAGAACCCCAAAGGAGGCATTAACATATCAAGGCTCATAAAGTACAAATCCTTAAATGTGAAAACTGACACTTTCCTCCT-CTCCAGGCTACATCTATATAGATTTCTTTTTAATGAAAAAGAAAAGGCTTA chr4 - 94230402 35322719 35322718 35323305 58907098 58907097 58907684 587 AATAGTAACTGTAAT----AATAGCCAGTTGTTTTGCAT-----TTTGCATTACATCATCATTTTGCTACAGTTGATGCTGCCTGGTATGTTACTC-TTTAGTTCATGGGAGTTT--GTATATTTCTCAAGTCAATCCCTGGTTTCACAGATGTTTGTTTTAAGAGAGTTCCTTAGCAGTATAAATTATAGTAGATTAAATTGCTCATTTAAGGGCATGACAAAGTGACTCTCAGAGAATGCTCTGGTATGCGAAGCAAACAGAGTAAGTGCAAAAAAGTAGTA---TGGGTCTCTACGAAAAAATTCCACTTCCTATGTTTGAGAAAGGGACTCTGTCATACCAAAGTTATGCCTCCTGCTAAAGTAGTTGAACCAGCTGCATCCCATGTGCTGAAAACACTCTTGTCTCTTATTTCTCCTGTTCAATTATTGTGTCTATAAATTGCAGTGGGCCACCTGTGCAATGCACTCATCCAGAATAGCCCCAGAGGAAGCATTAACATATCAAGGCTCATAAAGCACAAATCCTTAAATGTAAAAACTGACACTTTCATCCTACTCCAGCCTACATCTATATAGAC---------ATTAAAACAGAGAGGCCTA ....::x...x....----..x........x.:.x....-----...x:xxx...:x:x..:..::x..:-x..x.x.:.x..::..x:x...x.:-....::...:xx:.....--.:.....x.xx.::xx.:.:x.--:...x.........::...:..-...x:.:.xx.:..x..........::..:.....x..x.......x.x:.:x........:::....x....xx...::....x.::--.x:...x:...x:.:x:x.......:..x.---:...x::.:.x.....::---x:.x..::x..x:.x..x...x.:........:.:x...x.:...:.xx..-..x...x..:::.:.......:....x......::x...::....x.:.....x.......x.....:..................-...:.................::.......::..x.:.....:....:..........................:................:...............x....-......x...............:---------..x....x::.:....:.. 15M4D20M5D26M1I25M1D18M2D22M2I22M1I88M2I30M3D18M3I51M1I86M1I112M1I23M9D19M 413/575 71.8% 587/94230402 0.0% 36/575 6.3% 76484675 NA +8553 chr4 + 190214555 111832126 111832125 111832924 799 CAGAGGAAGAGACA-AGTATATAATGGGCCAGGAGGCTTTCTGTTGTTCTTTCTGTCAAAAATCATTCAGACATGATGTTTATTTGTAG-TAGCATTTTTGTCTGGGCTAAAGGAAGATGGATGAACTAAAACCTACTTGGGCTTGTCATTAATGGCCCAAATCAATCATTGAAAAAGGCCACTGCATTACCTCAAGGAGAGGATGAAAGCAATGGCATTTTGGTAAAGAGAGAGATGA----CTTTACTTCACTGA--TGGTAATTTTAATCATAAATAATTTATTAATGTCCTCCCTCTTGGTGGTGGACAGATTC------TTGATTTAT---TTATATTAGTGTGGTAAATTGAATCAACTAACTTTA---CTAAAAGATTAGAAAAATGTTAACCCTATGAAAAGGTAGTAAACAAGCAAGCTACATTCTGTCCTATGTGGTAATATAAGAGATCAACAAA----AAGGGTTTGCATCATATTTTCCACAGTACAACCTTTCAAAGT--------------AAAAAAATAATAATTTTG-----------TGGATTGTGCTGAATGTGATGAAACTCCATT-AGATCGTGAATTTGAGGTAGGA---------------TGGGGTTATCAACGGTTTTGCAAAAGATCACATTTATAGTTCAGAGCTGCCTCAGCTCAGAAGTGTCCTTCATTTATACTCCTTAGTGTATTCACTAAGATAGTAAACGAAAGAAGCTTCATGAATGTCGAATTAGTAGATATCATTTCTGTACTACT----TGGTTTCCAGGTCTTTG-GGTTCCATAGCAATTGGCA-TTAGCAAAGATCACAGCCTAGGGGATGGTTAAAATACAATTGTATT chr4 - 94230402 35333443 35333442 35334258 58896145 58896144 58896960 816 CAGAAATGGAGACATAGTTAGTGACAGATTGGTCAGCTCCCTGCTGCCCTTTTTTGACAAAAGAGTGAAGAGCCAGTGTTTATTTTCAAATAATGTTTTTGCTGAGGTTCTAGAAAGATGGATGAACTGAAACTGACTTTGATTTGGAGCTAATAGCCCAGATGAATCACTATAAGAGGCCACTGCCTTACCTCAGGTGAAGGCATGAGCTGATAGTGTTTGGGCAACATACAAGCTGACAGCCTTATATTTGCTGATGTGTTTACCTCAGATATAAACAAACGTTTAACAGATTGC--CCTGTTGATAGCTGGATTCTCAGTTTTCATTTATTCATTATATATGTGTGAATAACCGGGAAAAC--ATCTTAAACCTAAATAATT-------------CTCTTAGAATACGAAG-AAATAAGAATCATATATTCTGTACAGTGGAGGAAAAAATGCTTTCAGTCAAGCACATAAATTTGTGCC---CTTTGCCTTGTGCAAAGCTGTAATGTTGGCTTTCATGCAGAAATGAATAATAGCTTTATTCACCCTCTCTAGATTGCCCT-AACATGCTGCAACTTGATTAAGGGCATGAATTCAGGGCATGAATCTTCCTGATATAGTGAGATTATTGAAATTATCCCAAAAGAGAATGTTT----------GCTG-CTCTGCATGCAAAGATCTTCCAT---TGTCTCCTAAAGAATACAC-AAGACAG--GTCAAGAAAAGCTTAATTAATATGGAATTAGCACAAGTCCttttttttttttttttatattGTCTTTGCCTTTGTGACTGTAGGGCAGCTGGCAGTTGGAGGAGATCCTGGTC---------------ATATAAGTGTATT ....::x:......-...xx:.:.::.::::.xx:...::...:..::....:.xxxx....xx:.xx...xx:::.........x:.:-..:::......::x:..:.xx..:..............:....:x....x.::...xx::....:.....:..x.....:.:x..:..........x........:.x::...xxx:.:x::..:.::...x..:..x:x:x:..x...----...xxx..::....--..x.x.::.:.:x:.....:..x:xx....::xx:.x.--.:..x..:.:.x::.....------..x......---......xx.....:xx..::.::xx...--.::...---.....x:...-------------.:..xx...x.x.x..-...:...x.xxx..:.......x.x:..x:.x..x.x.x.xxx...::x..----.x:::....:::.---:...x.x:x..:...xx:.x:..x..--------------...x:.......::...:-----------.:.....:x..-..::..x..x....:x...-..:x.:......:::..:.x..---------------..:.:....::.x:x.x.:x.......xx.::...----------....-...x..x::x..:x:..:.:...---.::::.:..:x.x..x...-....:..--:x.:.:.:......x..x...:.x.......:.x.x:..x...:.x.x:.x:.----.:x.x..:xx.:.....-.::.x:.x:...::.....-..:.x::.....x::.:.---------------...:..x...... 14M1I74M1I149M4I14M2I38M2D19M6I9M3I28M2D6M3I10M13D16M1D51M4I13M3D26M14I18M11I11M1D19M1I22M15I35M10D4M1D23M3D19M1D7M2D53M4I17M1I19M1I18M15D13M 458/745 61.5% 816/94230402 0.0% 125/745 16.8% 76498683 NA +3126 chr4 + 190214555 111836183 111836182 111836232 50 TTCGTCTCAAAAACAAACAAACAAACAAAAAAAACTGGTTTGGATTTTTA chr4 - 94230402 79871410 79871409 79871459 14358944 14358943 14358993 50 TTTATCTTTAAAACAAACAAACAAACAAAAAGTACTAATTTGTATTTTCA ..::...:x......................:x...::....x.....:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 31964773 NA +12632 chr4 + 190214555 111873785 111873784 111874126 342 TTGTTGTTGTGTTTCTG-------GCCGCTCATTTTTGGGTTTTTGAAAACCAAAGAAAGAATAAGCCA----CTGGATGGACAGACAGACAATTGCTTGAAGCCAAA-TTA--TCAGTAGCTTAAGTAGTAATCCTTTAAGTGTATTGCCAAACATACCACAAAGAGATCTGAAATAGCTCTTGAGTGAAAAAAGCTGAGGTGATGTGGTGACAGCATACCTCAAACTGTTCT---GACCGCCTGAGACTTTAAGATGTTACTTTCATCTCCTTAAAAGGTACATAAAGGACAGCGAGGTTTGGAGCCTTCCTTCACTGTAGCTTGAATTATTAGAAGTT-----TTTTATTGTAATAGTAAA chr4 - 94230402 35344885 35344884 35345226 58885177 58885176 58885518 342 TTGTTGTCCCATTTTTTCCTCAGTGATGTTCATTTCCTTTCTTTT-----CCAAAGGCACAAAAAGTCATAAGCTGGATGGACAGATAGACACTTGCTTGAAGTCAAAATTACTTAACTAGATTAAGTGATAATCTTTTAAGTGTACTGCCAAACATACCACAGTAAGATTTGAAATGGCTCTGGAGTGCAAAAAGCCGATGAGATGTGGTAACAGCACACCTTAAAATGTTTTTAAGTCAGCTTAAGACTTAAAAATGCTACTTTCATCTTATTGAATAGCGTATGAGATCTCAAAATGTTTGAAGTTTTC-----------------TTATTAAATGTTTCCTCTTTTATTTCAATGGAAGA .......:x::...:.x-------.x:.:......::xxx:....-----......:x.x..x...:..----.............:.....x..........:....-...--.x.x...x......::.....:..........:................:x:....:......:.....x.....x.......:..x.x........:......:....:...x....:.---.x.x..:.:......x..:...:...........:x..:..x:.:::..:.::xx:x:x:.x.....:..::...-----------------......:.x...-----.......x:...:.x.:. 17M7I21M5D19M4I35M1I3M2I120M3I75M17D12M5I18M 239/320 74.7% 342/94230402 0.0% 44/320 13.8% 76528900 NA +36344 chr4 + 190214555 111879671 111879670 111880809 1139 ATTAATAATCATTTCTCATTCAAACAGCTGAGACACAACACTGCCATTAGGCAGTGTTGCTGCAACAGCTGAGTCATCCCTTTCAATTTGGTGTCAATTAGGCTAATTAGTGGTTAGCAGCTCAGACTGCCCTTCAATCATTTGGAAATGGCTCTCCA---AAAAGTCAGGCACTTGCTCTAAAATTTTCTCACATACTGATGGTATATGTCTTGACTGCTAAGACAGAAGCTTTAGGCTGGAAAG--ATGATATTTGGCCACCACATTTATCTGCCCATTGTCACA-----------AAATAGAGTTTTTCTTGGCCACCCACTAGTTCTATGGCCTCTTGTCAGCCATAGCAGTTGAGGCACAATTTGTTGGCCACTGATATTACTGAA--TCCTATTATCTTTTCATCTCACCAGCTAGGTGGTCGG-GGTGTGCTTTCCCCTAAGGGCATATGTACCTGTTAAAACACTATTTCTTTTGGCTCTGATTCTAAACC-CAGGCAGAAGGGATTAGAAACCTGGCTTTTAATTGTGCTTGCCTTTTTCTTTTGCGAACAGCAATCATTCTGTAACCCCTTTTTGTGATATGAGAATGAACACTGGATTAAAGCATATTTTTGATTCCTCACCAACCATTCTAGTCTGTCAGGCACCTTGTTTAAGCCGGTGGGTGTGCTTATCA-GCAGCTCA-GCTTTGGCAGA----------AGGCAAACATTGAGCAATTTCAAAGCAAATCTGGTTCCTACTCCTAGAAAAGATGCCTACGAA------CAAGTTTATGGAGATAATTCAAAGAACTATTCAGCATTGTTCATTTAGTTATCAAATTCAAATCTTTAAAGTTTTGACAGAGTAATGATTTCCTTCGTAAGATTTAAATACTCATAATACGTAAACAA--------AGAGCCTTCATACATTATAGAAAAACATAAAGTAGGTTGTTCTGTA-AATAAAATCATCATTTGAAATATATCTT-TTCAGAATTCAGGTAGTGTTACTACTACTTTTTAAAATTGTAATGTAT------------GCTGACATGACTCATCATATAAGAAAATTTCAATTTAAATAGTCCTCCACTATGCCCTATCCTAATGGTTTAGATTTTAAGAAAAGTTTTCTTGTTCTATTGCGTTATTTATGTTATCAACTTTTTGATTCTAAGAAATTGA chr4 - 94230402 35354170 35354169 35355294 58875109 58875108 58876233 1125 ATGAATAACCACATTCCTTTCAGGTAG-TGAGACACAG---------------GTGTTATTGCAATAGCTG--TCATCCACCC----GTACTATTAATTAGCCTAATTAACAGTTAGCAGTTCACATTATCCCTCAATCAACTTCAAAAGTCTCTTTAGACAAATGTCAGCTACTGAAACACAGCCTTTCCCATGGACCAAT-----ATGACTTGGCTGCTAGG------------GACTAAAAAATAATGCTATTTG--------ATTTGACGCCGTGCTGCAACAGATGCCATCAGAAATAGAGCTTTCATTTGCTACCTACTAATTCCAGGCTTTTCTGTCAGG------AGACACCACACAGTTTGTTGGCCACTGACACAATTGAACATCTTACTGTCTCTTCATTTCCCCAGCTAGGTGGTCGAAGGTGTGCTTTCCCTCAGGGGAA-ATATACCTGTTAAGGCAATATTTCTTTTGGCTCCAGTTCTAAGCCATAGGCAGA-GGGATTAGACATTCAGCTTTTAATTGTGTTTGCCTTTTTCTTTTGCAAATGGCAATCATTCTATAG-CACTTTCTGTGATTAGAAAATGAAAATTGGATTAAGGCATATTTTTTATTCTTGACCAACCATTCTAGTCAGAGAGGAACCTTGTTTAAGCCAGT-TGTGTACTTATCAGGCAGTGCAGGTTTTGGCAGCCATGTAGTGTGGGCAAATATTGAGTAATTTCAAAGCAAACCAAGCTTCATCTC--AGAAAAGAACAGTAAGAATTGTTTTGTGTTTTTGTAGACAACACAAAGAATTATTTAGCATTGTTCATTTATTTATCATCTTCAAATCTTTAAAGTTTTGACAGATTAATAACTTCCTTCAGGAGTTTTAAATAAACATGATGTATTAACAAACAGACTGAGAGCCTACTTAAATTGTACAAACATATAAAGCAGGCTGCCTTGTCTAATGAAAACCTGATAAGAAAAATATCTTAAAAAAAAAAAAAAAAGTGTCTC----AATTTCCGAGAAAGTAATTTATCTTTATATATCCACTGGAATAACAGATGAATGGAGTCAGTCACAGTTTAAATAAACCCCAATTATG-CCTAGCCTGATAATTC-GATTTTATCAACACTGTATATAT---------TTACTTATAGCTTCaattatttaatattataaatatGA ..x.....:..:x.::.x....:::..-.........:---------------.....::.....:.....--......x:::----x.:x.:.:......x.......:::........:...x.:.::..:.......x:.xx...x.x....::.---...x.....x:...x:xx.xx.:x:....:..::x..::..-----...x....:......:.------------.:..::...:--...x......--------....:x.xx.x:::..:x...-----------........:...:x..x..:...:....:...:.x.x::.::......x------..x::xx:....:...............:.:x.:....--..:..:.:...:.....:..x...............:-.............::.:...x.-..:..........::..x...............:::......:..-:.......-.........x.::::.............:.................:..::...........:..:-.x....:......xx..:......x.:........:..........x....:.x................x.xx...x..............:..-x....:.......-....:x..-.:........x----------:......:......:..............:.x:.:.:.xx...--........xxxx..x...------::x....x..x...:..:x.......:....:...............x......xx.........................x....:.:.......:x:..x........xx...:..:::.x.....--------.......x.x..x...:..x...x.:......:...:..:::...x-...:...x.x.x..xx....x.......-xxx.:..xxx.::x.....:x.----.x...:::.:.xx.....x...------------:...:x..:..xx..x.xxx:..xx.:.:x..:........:x..:.x.:....-....x...:..::..:-.......xx..x.x.x.x:x.:.---------...:....:x:x....:.x...:..x:..x:..xx... 27M1D10M15D18M2D10M4D71M3I41M5D17M12D10M2I10M8D21M11I49M6D38M2I37M1I22M1D45M1I8M1D66M1D95M1D13M1I8M1I11M10I43M2D18M6I128M8I46M1I28M1I22M4D22M12I54M1D16M1D23M9D38M 777/1065 73.0% 1125/94230402 0.0% 134/1065 12.6% 76525501 NA +52233 chr4 + 190214555 111883402 111883401 111884178 777 ACATGAGAAAAGAAATGGCAAATAGAACTGAAAAATCTCACAGCTATGTAAGAAATAAATTATACTGCCTATACTAAGCTTCCATTTAACAGAAAGCTTTCCTTTC--------------TCGTACT--------CTGTTTCCAGTAGATTTGTCACTTAAAGTTCTGTTCACATGGAATTTGATGAAATCCCCAGCAGACCACAAGATTGGTAAACCTGTTCTAACTGCTCTTACAATATCATGGAACAGAGCTTGAATTACCAATCCACCAGAGAATGCTAATGCAATTATGAGTGTTTACTTACACCATGTGTTTCTCACTGAGCCTCCCCCGCTGTGTCAGGATAAACCAAAGGGAGCTAATGTTTTATAGATGGTAAGACTCTGTTTGTTTTCAGTAGGGCTAAGTCTCCCAAAGCACTCAGACACACTAATTAAAGTAAACTGCAGAGGCCCATAATAAAATATATGTGTTTGGAGACTGTGAGATGAACCCTACTGGCTTATTAAAAGTCAAAAGAAAAATATACATTATTTATGACTTCAAAGGGACACATTGTGAGCTCCAGTTTATTTAAAGGATTAACTAAGCAGTGGTTATTGGTGACCATCTGAACAGTTCTTCTTTCACAGTTCATTAGTTCTGTCATATATGTGAGAAGTCATCATTTGGGTTCAAATCAAATATTATTAATCAAATAAATTACAGAGGGTACACCAACATTATTAAATGGAATCTTTGTGAAAATAGCTGCTAATAAATCTGGTACTTACTTTTTAACAGTTGCCTAGTTGCA chr4 - 94230402 35357582 35357581 35358356 58872047 58872046 58872821 775 ACATCAGCAATGAGATT----AGAGGAATGAGAAATTTCAGAGACATGAAAAAACACAATTAGACTG---------AAGGGGTATTTAGCAGTGTGCTTCCTTTTCAGATTCCCTGTGGCTTGTTCTGTCTGTTGCTGTTTCTATTAGATTTGTCATTTAAATTTCTCTCCAAATGGAAATTCATGAAATCCC-AGAAGACAAGGAGATTGGTAAACCTGCTCTAACTGCTCTAACAATATCATGAAACAGAGCTTGAATTACCAATACACCCGGGAATTCTAATGCAATTATGAGTGTTTACTTACACCATGTGTTTCTCACTGAGCCTCG---GCTGTATCAGGATAAACCAAAGGGAGCTAATGTTTTATAGATGGTAAGACTCTGTTTGTTTTCAGTAGGGCTAAGTCTCCCAGAGCACTCAGACACACTAATTAAAGTAAACTGCAGAGGCCCATAATAAAATATATGTGTTTGGAGACTGTGAGATGAACTCCACTGGCTTATTAAAAGTCAAAAGAAAAATATACATTATTTATGACTTCAAAGGGACACATTGTGAGCTCCGGTTTATTTAAAGGATTAACTAAGCATCGGTTATTGGTGACCATCTGAACAGCTTTCCTTTCACAGTTCATTAGTTATGTCATATATGTGGGAAGTCATAATTTGGGTTTAGATCAAATATTATTAATCAAATAAATTATGGAGGGTACACCAACATTATTAAATGTAATCTTTAGGAAAATAACAGCTCACAAATC-------CACTTTTCTCCAGTTGCCCAATTACA ....x..x..x..:..x----.x..:.x...:....:...x..x:...x..:..xxx.....x....---------.:xxxx:.....:...x:x....:.:....--------------.:..x..--------.......:.x...........:.....x....x.:..x......x..x..........-..x....x.x:...............:............x...........:.....................x....x.:....x...................................................x---.....:............................................................................:..............................................................................:.:......................................................................:.........................x:........................:.:.:...................x.............:........x.........:.:...........................::.........................x.......:x.......:.x...x.:.....-------:......:xx........:.:..:.. 17M4D46M9D30M14I7M8I58M1D138M3D431M7D26M 668/753 88.7% 775/94230402 0.0% 46/753 6.1% 76525820 NA +23128 chr4 + 190214555 111902013 111902012 111902356 344 TTTCCCTTTACCCCGCCTAGA-------------------TATAATAACCTATTTCTGAAGTAATACGGATAATTCTGTGACAAATCCACTTCAGCCTTGGTAATGCCCTTCGTTTTGACTTCAAAACATTCACTGGCTCTCATGGATTTGTACTATTTAACACCCAGATAAAGGTAAGCTGCCTTTTTTAATAACGATGGATTACATTTTCTCGTTACATGCTCTTATTCAATTGGATTTTTTCAATTTAAGCACATCTATTCTAGGGAAA-----AATGTAAGTCTGAGAATAATTGTAGTTATTAGAAAAGTAAACATGATGAAACACAAAGTAACATAAACTGAAATTATCTGATTAAATTACT chr4 - 94230402 35366356 35366355 35366723 58863680 58863679 58864047 368 TTTCTCTTTTCCACCCCTAAACATGTTATTTCTACAACCCTATAGCAGGCCATTTCTGAGGTAATACATATAATTCGGTGACAAATCCACTTCAGCCTTCATAATGCCCTTCGTTTTTACTTCAAAACATTCACTGACTCTCATGGATTTGTACTATTTAACACCCAGATAAAGGTAAGCTGTCTTTTTTAATAATGATGGATTACATTTTCTCGTTACATGCTCTGACTCAATTGGATTTTTTCAGTGTGAGCAAATCTATTCCAGAGATAACAGTAATGCCAGTGTGAGAATAATTGTAGTTATTAGAAAGGTAAACGGGAGGAAAGAAAAACTAGCATAAATGAAAATTAATTGACTAAATTACT ....:....x..x.x....:.-------------------....::.:x.:........:.......:x.......x......................x:................x..................:.............................................:............:..............................x.:.................:.x.:....x........:..:..x.-----....:x...x.........................:......:x..x....x.x...x..:......:x:......x:...:......... 21M19I232M5I91M 298/344 86.6% 368/94230402 0.0% 24/344 7.0% 76535657 NA +26069 chr4 + 190214555 111903913 111903912 111904492 580 AGGAGGGAAGAG---AAAAAGATCTG--TATTTGTTTTACTACCTAGTGACAGCCATATAGAATGACATAATCCTGTTTTTGTAGGACTGTTTTGTTAAAGTAA---GAATATTGTGTTTGTCTTATTTAAAACATTTCA-----TAACCGTGCACCAAAAGA---------AAGATATGAAGACCCTCCTGTTTCATTTCCTGCCTCCATAGAATGTTGTGTTACTAAAATATTTTTATTACAGCAGAACCTGAAGCAATATAAAATGTTTGCTTGAGGATTATTTTTAGTCCCTTTAAGCTGAACTTCTGTAATGAAATCTATTTAGAGACATTCCATAATACCCTATGGTTACTAGCTTATGCAAATGAAGTGTGACCCTGGGAATAAACCTCTTGCCCCCTC-ATCATCCTCCCTGGCTTCAAAGGTCTCTAGGCAATCACTTTTTTAAGTGAAGAGATT-----------TTAAGGCTGAATTGAAATAGAAAGAGAGGGAATATAACTTGATATATAATACTCGTACAACCCAACCATT-TACTATCTACTGTTTTCCCATAAATATTTAGACACTAATT-----TATAAATCCAT-----TTGGGATAAAGGTATTAG chr4 - 94230402 35367505 35367504 35368109 58862294 58862293 58862898 605 AGGGGAGAAGAGCTAGTAAAGATCTGAGTATTTGTTCAGCCACCCTGTCTCAGCCATATGGAATGATATAAGTCTGTTTTTGTAGGATTACTTTGCTAAAATAATATGAATATCACATTTTTCTTCTCTAAAACATATTACAATATAATGTTGCCCTGAGAGAGAAAAGGAGAAGATGAGCAGCTCCTCCTGTTTCATTTCCTGCTTTCACGGATTGTTGTGTTACTAAAATATTTTTATTACAGAAGAACTTGAAGCAATATACAATGTTTGTCAGAGGATTATTTATAGTCCCTTTAAGCTGAATTTCTGTAATGAAATCCATTTACAGACATTCCACAGTGCCCTATGGTTACTTGCTTATGCAAATGAAATGTGACCCTTGAAATAAGCCTCTTGCCCTTGCTGTCACCCGCCTTGGCTTCAAAGGTCTACAGACAATCGC-TTCTTAAGTGAATGGGTTTTTTTATTTGGTTTTGACTGAGGGGAAAAAGAAAATGAAAAAAAAAAAAATGAAA-------------------AACCTTTCTATTGCATGGTATTCTTGCAGAGATTCTTAGCAACTGACTGGTTGTATATATGTATAAAGGTTTGCATAAAGGTTTTAG ...:.:......---:x.........--........:x:.:...:x..xx.........:......:....x:..............:.::....:....:...---......::::...x....x.:........x.:.-----...:xx...x.::.:...---------.....:x.x..x:....................:.:..::..x..............................x.....:............x........::x...........x..................:...............:.....x..........:.:.:.............x...............:.........x.:.....:..........::x.-:...:..x..:...............x:..:.....:.-..:.........x:.:..-----------..xx.:....:xx....x.....:x..:::..x.x..xx...x.-------------------....x..-..:.::x.:x.:..:.:x..x.:..x:....xx...:.:.-----....x..x:..-----..x.x........x.... 12M3I11M2I76M3I33M5I18M9I234M1I38M1D18M11I44M19D7M1I40M5I11M5I18M 438/560 78.2% 605/94230402 0.0% 65/560 11.6% 76536408 NA +15569 chr4 + 190214555 111919656 111919655 111920037 382 AAGAGTTAAAACTTCTCAACACATTATACATATATTCATACATAGGGCCAAAGGGATACCATTCTCATTTT-TCATCATCAAAGCATTT-ATAAGATTTCTATCTTCTTTTGCTTTTGTGACCTCT---AGCCAGAAAGGCCAAAGT-AAATAAAGGTCAAGATAGATGTCAAATCAAGCAATTACTAAACAGGGAACTTGGCTGTGACCCTCAGATTAGAAATGGTGACCTGTCACAGCAACAGGGGAAAACCCTCCTGCAACTCCTCTCCCATCTATGAAATACAATCTAGATTTGCAGCCTAGACTGAAAAAAAATTGATACCTTTCATTTGCGTTTTAATCTTTTCCACCCTTCATATTGGGGTTGTCCTCCCATTTTCTCCTT chr4 - 94230402 35376112 35376111 35376485 58853918 58853917 58854291 374 AAGGGTTAAAATATCATAGCAGATTATATATACATTTATGCCAAAGGCCAGAGGAGTAGTAGTCCTATTTCATAATCACTACGGCGTTTTATGGAACTTCTGCCTCCGTATGTGTCTGTGACCTCTCTCAGTTGGGAAGGCCAAAATGAAAAAAAGGTCAAAATAGATGTCAGCCCAAGCAATTATGAAAGTGAGAACTTGGACATGACCCTGAGATTAGAAATGGTGACCTGTCGCAGCAACAGGGGAAAACCTGCC-----ATGCTGTCTT-TCTGTCAAATACAAACTACCATGGCAGTCT--------TAAAATGTAATGTCATTTATTTGCATTTTAATCTCTTTCACCACTAATATTGGACTTTCCTTCTCATCTTCTCTCT ...:.......:x..x:.:..x......:...:...:..:.xx.:.....:...::..x:.x..::....:-.x....::.x:..:...-..:::.:....::..:.x.x..:x.:..........---..:::.:.........:.-...x.........:..........:x:..........:x...xx.:........x::.......x......................:..................:x..-----x.x..x..::-...:.x........x...xxx.x....:..--------x....xx.:..::.x..:......:.........:..:....x:.x.......:x..x:.:..:...:.....::. 71M1I17M1I36M3I18M1I110M5D10M1D30M8D76M 269/368 73.1% 374/94230402 0.0% 20/368 5.4% 76543544 NA +7457 chr4 + 190214555 111936272 111936271 111936516 245 TGGTAGTTATCCACTACACCAAAATATGCCTTCTGAGATTTGCATGCATTTTAGTTTTTGTTT-GAAAC--AGTAACGCTTTGGGATTTCAGTTTAGTAATTAAAAGGAACAAAGATGATATTTTCCAGTATTTATGCTGTGCTCTTT-CAAAACTACAAGAAAAATGAGCAAGCAGCTTGCTCATAACCAGAAATGTTGACAAGATTAATTCTT--------ATCTCTGAAGCTTAATT-AAGCATCTTAATTAAAC chr4 - 94230402 35381260 35381259 35381512 58848891 58848890 58849143 253 TGCTAGTTACCCAAAAGAGTAAAGTGTACACT---GGTATTGCCTCTGTTT--GTTTTTATTTTGAGACTTGATGAAGCTTCAGGATTTAAGTCTGGTAATTAGACAAGGTGTAGATGGTATTTTGAATTATTTATGTAGTGCTCTTTAAAAAATTAGGTAAAATATTAGCCGACAGCTTGCTCATATTCTGATGTGTGGGTAAGATTAATTCTTTTGATGACAGTACTGGAGCTTGATTAAAATGTCTTAATTAAAC ..x......:...xx.x.x:...:.:.:.x:.---:.xx....x.x::...--......:...-..:..--::.:.x....::......x...:.:.......:.x::::::x.....:......xx.x........:x.........-x....:..x:x:...x..x...x::.............x:.x..x:...x.::.............--------.x:x...:.....:...-..:::............ 32M3D16M2D10M1I5M2I77M1I66M8I17M1I17M 168/240 70.0% 253/94230402 0.0% 18/240 7.5% 76555012 NA +9820 chr4 + 190214555 111953123 111953122 111953640 518 CTACGTGAGCTTAGTAAAGCTGGATTTACCATACTCAATCAATAAATGCATGTTCCTTTTGTACTCATGTGGTTAATTTGTTTTTAGTTGTGCTCCATTGTTTTCATAAATTTAGTAAATAAATGAGCATAGGTGCAAACATCA-TGATTGTTTACAGCACAAATATTATGCAGGTTGAGGGAGTTTTAGA-AGAC-CCACTGGCAATCCTTAAAGCTAAAAAGTATTTAAAGTTCAGACATTCTTTTCTTTGCACTTCTG---TTCTTGATGTCCTTGTTTTCTGAATATCACAAACCCAACTGTTTAGCTCATGTGGCATGGA-AGCTGAATGGGCATAC-CACAGAAGTTCTTAATAAATAAAAAATAAAATA----------------------AAATAATTTCTG----CTTCTAATTTATTTCCCCACTAAAGAAAAGGCAATTTTATATTTGCTTAGGAAAAACCACTTTGATTATTACTTCCGTGGGAGGATTTCTTTATTATCTTATTGAAAAACAACAGCTTATAATTCTTTCTTCATGTAC chr4 - 94230402 35386796 35386795 35387332 58843071 58843070 58843607 537 CCAGGGGATTTAATTGGAGCCAGATTCACCGTAGTCAGT---TAAGTACACATTCCTTTGGTACATGTGTGACTAATCTACTTTTAATTGAGCTCCATTGTTTTCATATATTTAGTAAACAAACGTGCATAGGTACAAAAGCTGCTGCTTGTTGACAACACAAACAGTATGCAGCTTGCTGGAGCTTTGGACAGGCACCCTTGGCAGTAGATGTGG-TATAGTGTATTTGATGCACAGACAT--ATTTCTTTGAGCTTTTTACCCTTTTTTTTTTCACATTTCCTGGATTTTTGTGTCCCAGTGGCCTGTTCTGTGTGATTTTCACAGCTGAGTGTAGGTGCAAACACAAGCTCTTGCTCCATACAAAGACAACTGTGTGCCAGCATTATTAAGGGGTAACTGGGTTTTGGTTTGTTTTGCTCTCTCTTTTTGCTAAATATTAAGCCCTTTTTGACTGAATTA--AAAAGGCA---GGATTA-TACTGCTGT--GATAACTCTTTTATTACTTTACT-AGGAACAGAGGCACATCATTCATTTTTTACCTGC .:.x.x..x:.x.x.::...::....:...:..x...:.---...:.:..::.......x....x::....::....:.::.....:...x.................x..........:...:.x........:....x::::-..x.....x...:......:.x.......x...xx....:...:..-..:.-..x:.....:.xxx.:x:.-..x.:x......:.x.:x.......--x........x:...:.x---:.:..xx.x.:.x::...:...:..x.:xxx:x....::x.::.:x::::....::x.xx.-......:..x:x:.:.-x...x...:....:x.xx...x...:xx..x.:----------------------..x.::x..:..----x..:.:x.:.x.:.:::::.....x.xx.:..xx....xx.:.x:x...--....:x..---x.....-....x.:..--..x:.:.::.......::...:.-.::....:x:..x:..x....x..:..:.:x.:. 39M3D102M1I46M1I4M1I19M1D25M2D17M3I61M1I16M1I33M22I12M4I49M2D8M3D6M1D9M2D23M1D34M 322/503 64.0% 537/94230402 0.0% 49/503 9.7% 76566327 NA +18480 chr4 + 190214555 111954770 111954769 111955078 309 GATGTTGCATCACTTAATCAGAATGCATTCCTTCCT-TTAGCAAAATCTCAAAATGACATATAGTAGAATACCCAGTCTCTACGGAGAAATTTAATTAAACTGCAGTCCCTTTATACCAGCACAAATATTGTGAGGGAAAACAACTCAACTCCTCTGACATTTTTGCAAATAGGTTTAGTGGAATCCATTCTGTTTACTTTTACTGACATTTG-TTTTTCAGTCAATTATCTCACATGGTTATTTTTTTCCTTTCATAATTTATTGCTAGCAACCTATCCGTAAGGATAAATACAAG--TAATTCCTTTCTTT chr4 - 94230402 35387954 35387953 35388262 58842141 58842140 58842449 309 GATGCTGCATCCCTTCATCAGAATGCTGTCCTTCATCTTAGCAAAGTCTCAAAGTGACATCTAGTGGAATATTTAGTCTCTGTGGGGAAATTTAATTAAACCACAGTCCCTTTATACCAGCACAAATATTGTGAAGGAAAACAACTCAGCTCCTTTGACATTTTTACAAATAGGTTCAGTAGAAACTGCTGTGTTTACTTTAACTGACATTTGTTTTTTCAGTCAATTATCCCTCA--GT--CTTTTTTTCTTCCATAATTTATTACATGAAGCTCAGCCATAATAATAAATACAAAGTTGTTTCCCTTTTCT ....:......x...x..........xx......x.-........:.......:......x....:.....:::.......::..:...............::...............................:.............:.....:..........:..........:...:...x.:::.x..........x...........-.................:.x..--..--:......:...:...........:.xx.x.:.::.x..:...x:..........:--.:x....:..:.:. 36M1I176M1I22M2D2M2D55M2I14M 253/305 83.0% 309/94230402 0.0% 8/305 2.6% 76566816 NA +3650 chr4 + 190214555 111961040 111961039 111961109 70 CTGCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCGTGCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..x.::........:.x...x:xx.x........::..................--..........:::. 54M2D14M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 93763901 NA +3001 chr4 + 190214555 111961502 111961501 111961550 49 GTGTGTGTGTGTGTGTGTCTGTGTGTATACACAGACACACACACACACT chr4 - 94230402 25393263 25393262 25393311 68837092 68837091 68837140 49 GTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTT ...::.....:...:...x.x.....:......x......:.....::. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 86568239 NA +3092 chr4 + 190214555 111970217 111970216 111970265 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x..................:.x:.....:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 107563794 82650761 +3092 chr4 + 190214555 111970219 111970218 111970267 49 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx...:x....................x:...:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 107563796 82650759 +3174 chr4 + 190214555 111970222 111970221 111970284 63 TATATATATATATATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAG chr4 - 94230402 32959568 32959567 32959630 61270773 61270772 61270835 63 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGG .:.:..:x....:...x....x.....::...:.......:.:.....:.x...:..x:..:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 79010654 NA +3126 chr4 + 190214555 111970234 111970233 111970301 68 TATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATACACA chr4 - 94230402 47095159 47095158 47095226 47135177 47135176 47135244 68 TAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ..x.x.....:..........::.:.:......:..:...x..xx:.x:.x:.::..::......... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 64875075 NA +3005 chr4 + 190214555 111970235 111970234 111970275 41 ATGTGTGTGTGTGTGTGTGTGTATATATACATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x................:......:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 22148954 NA +3708 chr4 + 190214555 111970244 111970243 111970325 82 TGTGTGTGTGTGTATATATACATATATATATACATGTATAGATACATATATATACACATATATATACATATATATATACACA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .......:.....::...x....:...x..:.:......:xx.....xx...:.....:.:.:.:...x.:.:.x..:x.:. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 103574455 86640100 +3470 chr4 + 190214555 111970264 111970263 111970354 91 CATATATATATACATGTATAGATACATATATATACACATATATATACATATATATATACACACACACACATATATATATATACACTACACC chr4 - 94230402 8395787 8395786 8395877 85834526 85834525 85834616 91 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACC ...:.:.:...:::..:...:.:.::...x..:.:.::...::x.....xx...:.:.............x.:.:.x..:x.:.xx.x... 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 103574477 86640078 +3150 chr4 + 190214555 111999317 111999316 111999370 54 GGGAGGGGAGGGGAGGGGAGAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGGAG chr4 - 94230402 92619649 92619648 92619702 1610701 1610700 1610754 54 GGGACGGGATGGGGACGGAGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGAG ....x....x...::x....:.:.x.::........x..::............. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 19379668 NA +3134 chr4 + 190214555 111999464 111999463 111999562 99 GAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGGAGGGAGGGAGGGAGGGAG-GGAGGGAGGGAAGGAAGGAAGGAGGGAGGGAGGAGACAAAG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAG-----AGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAG-GGGAAAAAGCAAAG .::.:.....x.:x::..:x...::....x..-----..:..x:....::::x...x.-............:..:.:......:.-....::.::..... 32M5D21M1I26M1D14M 63/93 67.7% 94/94230402 0.0% 7/93 7.5% 71533689 NA +10368 chr4 + 190214555 112002269 112002268 112002520 252 AAGGAGAATGTACATTAGGCCCAAGCACAGCTCATCTGGTATGTACAAGTGCTGCAGGGAAAACT--AGAACACCTGCATGAACATTTGATTACTTAACCAGGGCTTTTGTCTAGTCTGTCAAATCCCTCTGTTAGAAATCCCTCTTTCTGACACAATAACAACAGAACCAGTTTTTCAAATGAATGTTCTTTGACTCCAAAGAGCAAGCCAGGACTCATACTCGCCGTGTGTGTCACCATCTCCTTTCAGGAG chr4 - 94230402 35400841 35400840 35401091 58829312 58829311 58829562 251 AAAGCAAGAGTGTATCAGGTCCAAGCACAGTCCGTGTGCTCAGTACAAATGCTGCAGGGAAAACTGGAGAACACCTGCATAACTGTTTTATTACTGAACAGGGCTCTTTGTCTAACCTGTCAA-CCACCCTGCTGGGAATCTCTCATTTTGACACAATAACAAGAGAAACAGTTTTAAAAATGAATGTTGAGATGCGAAAGAAAGCAAGCCCCAACTTGTA--CGCTCTGCATGTTACCTTTCCACTTAGTGAG ..:.x:.:x..::..:...:..........::.:.x..x.xx......:................--.............:.x::...x......x...x:..x::........::.......-:.x.:...:.:.:....:...x..:..............x....x.......xx...........xxxxx:.xxx.:.:........xx:...::..--...:x..::...:...x.::.x:..x:x... 65M2I56M1D97M2D31M 177/249 71.1% 251/94230402 0.0% 5/249 2.0% 76601428 NA +3258 chr4 + 190214555 112006724 112006723 112006804 81 AGCCTGGGCAACAGAGCAAGATTTGGTCTCAAAAAACAAAACAAAACAAAACAAAAACAACCTCTGAGCTATGATTTCTCA chr4 - 94230402 71890449 71890448 71890529 22339874 22339873 22339954 81 AACATGGGCAAAAAAATGAGATGTTTATTCTAAAAACAAACTAAAACAAACAAAAAACACCCTCATAGTTAAAACTTTTCA .:.x.......x.:.:::....x.xxx:..x.........x:........xx.......x....xx..:..x:.:..:... 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 40116275 NA +18594 chr4 + 190214555 112029774 112029773 112030309 536 CATGGATCTTGCCACTGCGGTGCGGCAGATGGGCTGCGCTCTGGCATGCCTAATGCTCAGCTTCCGTCCGTCAGTGGCTCCAGCCACTGTTCCTCCACGCTTCCCTGGCATGCGAGTATTAGGTTTCACACAGAAATGCAAAAAAAAATGCCTTTAAGCTCATTTCTACATGAAATACAATATATTCGCCAGATAAGC-TGGACCCTCATATTAATCATAAATCAATTATGTTTACCCTTAGCCAAGAAAGTACTAAAATG--TTCTTCCCTCATTTTGAAACCTAATATGATATTCACAGTAATTATGCTGGCTTTCATATGAATCATTGTCTCATTCTGTAATTGTTAG-TACATGGCTGATTCATTTTCTGCCTTATAGTATTTGAAATGATCATTCCACTTGTGGTAG-GATTTGGGGATTTAT--------------TGAAGTAAATCCTTTTACTCATTAGACTTTCCTTTTTTGTATCCCATCTTCAGTCTTTTTGTTG---AGATTTTACAC--CAAAGTTTTCTAAAACCTGTAGCAAGTAGGAGAACAAC chr4 - 94230402 35407713 35407712 35408259 58822144 58822143 58822690 547 CATTTGTCTTCCTACTGCCATACAACAGATGGACTGGAATCCAGCATGAATGATGTCAAATCTTCATCTAGCAGTAGCTCTCACTAGAATTCCTCCCATCCACTCTGGCTTGCAAATACCCTGTTTCA-ATTGAGATG---AGAAAAATGCCTTTATCCTCATTTCTCTGTGAAATACAATATATTTGGAAGATAAGCCTGGACCTTGATGTTAATCATAAATCAATTATATTTATTTTTGACCTAGAAAGCATGAAAATTCCTTTTTTCCTTATTTCAAAATCCAGCAGGATATTCACAGTAATTACACCACTTTTTATATGAATCATAAGCTCATATTGTAATCATTAGAGATACAGCTGAGTAGTTG--TGTATCAGAATATTTGAAATGCCCATTTCAATTGCAGTAGTGGTTTGGGAAATTATTTATTTGTAATAGCTGCAGCAAATCCTTTTGTTAGCCAGATTTCCCCCTTTTATTCTTCATGT--AACCTTTATTTTAGATAGTTTTTACACCTCAAAATTCTGCATAA-----AGAAAGTGAGAAGAGAAC ...xx:....x.:.....x:.:.::.......:...x:x..::.....xx.:...::x.:::.:.:..::x....:....:x:.:.xx:.......xxx.:x.:.....x...:.:..::xx......-.:x..:...---.:.............xx.........x::................:.xx........-......:.x..:...................:....:::..::..x......:.:x.....x--..:..:...:....::...:.:.::.x.................::.::x:...:...........x:x.....x:......::....-x.:.::.....x.x:..x--..:x.:.x.:...........x:....:..x...::....-.:......:.x....--------------..x..:..........::.x:::...:..:..::....:.x:::...x.--.::....x.x..:---..x........--....:..:.x:.x..-----..x....::..::.x... 128M1D9M3D57M1I62M2I88M1I18M2D40M1I15M14I49M2D13M3I11M2I15M5D18M 365/523 69.8% 547/94230402 0.0% 37/523 7.1% 76622061 NA +6981 chr4 + 190214555 112030554 112030553 112030805 252 GGTATCATATACATCAA----TTTTTGGGAA-GAGCACATTTAAAGACAGATGTCTGCTGTCCTGGCACCTCCAATATCACATTATTTTATGCA-TATTAAGAAGGTGTCATGGAATCGTCTCTGGTTCAGACCCTCTGGAATGTGAGGCATGGTCTTGGGATTGTGCCCTGCTGCCCTTTCTACATTAAATGCTAAACTGTCAGAGTGAGAGGAAACAGGTGGACCCAGTACAACGAGGGC-----CATCTGACTGAGACTG chr4 - 94230402 35408993 35408992 35409253 58821150 58821149 58821410 261 GATATCAAATATGCAGACTTCTTTTTATGAGCAATCACTTTCAATTGTCAATGTCTAGAACTCAAGCACCAGAGGTATCCCATTATTCTGTGTGCTATGAAATAAGCGTCATTTC-TCCTGTTCGTCTCGGACTCTGTGGAATGTAAG-CATGATCTTATGGTCAGGCCCTGCTGCCCTTTCCACATTAAGTATGAAACTGTCAAAGTGAGTGGAAACAGGTGTATGCAGAGAAAGAAAGATAGCTATATCTGAAGGAGGTTG .:.....x...:::x:.----.....:x..:-:.x...x..:..xx::x:......:xx:::.x:.....xxx::....x.......:.:..::-...x..:x.:.:.....xxx-..x.x.::.x:..:...:..x........:..-....:....:x.:.::x................:.......:.::x.........:......x...........x.:x...x:x..x:.:.::-----:......xx...::.. 17M4I10M1I62M1I20M1D32M1D93M5I16M 164/250 65.6% 261/94230402 0.0% 13/250 5.2% 76621561 NA +21897 chr4 + 190214555 112041531 112041530 112042448 918 TATAGGAGTATC-----CTCTTAAGCTGTCACTTTTACAAATGTAAGCAAAATAATTTTATAAAGAGATATTTTG--TCTTATTAAACACTGCCCCAGTACATCGTCCAAATTTCCCTCTTACCTTGAAGGAAACGTGAATGAATATTGGAGCAGAAGGTTTACATTAGAGTTTTTATTTAAATTATCATTACCATAGGCTCTTAAATCACCTAATGATTCGTTTGCCTT-GCAAACCTAAAACAGAACTTTTTAAGATAAACTTTAACTTGCTACAAGTCATAAAATTATTTCCATATAAAGTCTGTTTATTAAATGTGTTAAACTGTTATATGGGCCCTTTAAATTTATGGAAAGGCAAAAAAACTGCCTGGCAGCAATACCTGCAAAAGCAATATACACTAGGGAAAAAA------TCATACTATAGGAATAGAGAGTAGACAAAGAATATCTGAAATATCCAAGGCTGGAAATTGAATTA----CAAAGTCCAGCATGAGCCAAGATGATCTCATTTTATGTGGAGCCATCCTTAAGGCAAAGATTACAGCTCTAAACTTTATCTT-----TTAGACTTTCATTATTTTGG---CTAATTCTAAGAGGAGGCATTTCAGACTTCTTCATCTCCTGAT-TAAAGGAATGTAATGACTAATTGGGGTTCAACACCCCATAGCCCTTTTCCCCATTTTTGGAT--GCAAACAAATTCCTGAAAAAGATATGGTTACAAATTACTATTGCTCCCAGCAAAAGATCATAAGGTTAATGTTTTAACATTTCTGGGATATACCTGCTAATTGTAGAGATTTTCGCTGCGAACACA----------------TATATAGCGA---------------------------ACACTATATATGGCCAGTTTAGCTTTGCAACACTTTGCAACTGGTACATTAAGCCATTAGAAAAATTATTAGTGATAAATATCTCTTT-CTATCAAATAACAAAGA chr4 - 94230402 35412573 35412572 35413511 58816892 58816891 58817830 939 TATGGGAGCATAACACACTTTTAGCTCATCACTGTTACAAACCTATG--ATGTTATTTT-TAAAAATATTTCTCAATTCTTACTAAAACATGAGCTGAT------TCCAAATTTATCTGCAGTCTTTAAAGTGCAGTGAACGGCTATCAGTCCAGTTAACTTATGCTTGCATTTGCATTCAAGTTATCATTAACATAAGGTCTTAAATCAGATCCTGATTAGTTTGCTTTTGAAAAACTAAAGCAGAACTTTCTAAGATAAACTTTTTCATGCTACTATTCAAAAAGTTCTTTCCATATAAAGTATGTTTATTAAATGTGCTGAACTGTTATATAGTTCCTTTAAATTTATGAAAAGACTGAGAAACTGCTTGGCAAGAATACTTGAAATGACAATATATATCAT-----AAATGCCTTTCGTACTATACAAAGA-ACAGCATGCAAA-AAGAACTAAAAAGTTCA-----GCATGTTCACTTATGTTCTGAGTATAACATAAGCCAAGCTGACCTCATTTTATACGAGGCCATTTTATACTCAAA---TATACCACTAAGCTTTATTTTATCTGTTCTATTTTCATTTTTTTGGGGCCAAATTGGAAATGAGAGCATTT-GGGCTTCTGAGCTGCCTGACAGGGAGGAATTTAAAAATGGAACAAGGTTCAGAAC----TGACTCCTTT-----------GATGAGTAGATAATTTATCTTGAAATATATGCTTCTAAGCTAGCA------CAAAGAAATGATGCTAATGTTGCTGTCCTAA-----CTGGAGTGAACAT-TTAATTGTCTGAACTTCTACTGCAAGTAGAGTTTCAATTCTCTCTTTAAAAAGTGAGTGATCTCATGGTTTGTTAATTTTGGCAAACGCTCTCTGACTAGTTCACTTCTGTAACACACTACAGCAGGCAAGTTAAGCCATTAGGAAAATTAGTAGAGCCAAGTGCCTTTTCACTGTCAAACAACAAAGA ...:....:..x-----..:...:x:::.....x.......:x..x.--.x:.x.....-....:.x..x.:.::--.....:....xxx..xx.:::.------.........x:..x:x::...x..:.x:xx.....:.:x...::.xx...xx:::...:::.x.x:...x:...:..:.........x....:.x..........xx.xx.....x......:..-.x...x.....:.........:.............xx.x......x.x...x...:..x..............x...............:.:...........:.x:..............:....:.x:.:.......:.....:x.....:..x..x::.......:.::.x-----...------..:.......x:..x.-.x..:.x:....-..x.x..:...x:.:..-----.x.x:..x.x...----.x:...x:.:...:.......x...:..........::.::.....::.xx.xx....---..:.x.x....:......:..-----..xx.:.......x......---.x....xx..:x.:::......-:.:.....xx:::x.....:-x::......x...x:.:x:.x:::......:x..----.::.:.:...-----------...--.:.:.:..x..x::xx:...x.....x..x:..::..x:.------.x.:x...x...xx...x...:x...::...-----....::.:x..x.-:.......xx::.:..:::....:.::.x.----------------..x.x..:..---------------------------.x..xx.x.x..:.:....:.x:.:..:.....x:.:..:.x..:.x:............:.......x...x.x:..:.::..:..:-..:.....:........ 12M5I30M2D10M1D15M2I22M6D125M1I174M5D3M6I16M1D12M1D17M5D13M4I58M3D21M5I20M3I22M1D20M1I34M4D10M11D3M2I40M6D31M5D13M1D30M16I10M27I88M1I17M 592/866 68.4% 939/94230402 0.0% 125/866 14.4% 76628958 NA +3489 chr4 + 190214555 112042522 112042521 112042678 157 ATTAAGAAGAGAGCTCCATGAAGCATCTAAGCTCCAAGGGGGTTATCTGACAGACTAGAAAAACTTCTTTCTTAAGTCTTTGGATACTTTACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395714 8395713 8395862 85834541 85834540 85834689 149 ACTGAGAGTTAAAGTTCATACAACCTTTAGAATTCAAGTGGAATTTGT-ACATACAGAAGAAAATTC---CCCAGGCCATGTG----TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:...:xx:.:x.:...:x.:.x.:..::x.:....x..:x.x.x.-...x..x::.:...x...---.::.:.:.x.xx.----.x..::.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 48M1D18M3D13M4D70M 93/149 62.4% 149/94230402 0.0% 8/149 5.4% 103646808 86567747 +3323 chr4 + 190214555 112042604 112042603 112042679 76 GATACTTTACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964809 14964808 14964884 79265519 79265518 79265594 76 GGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.::.x.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx........::............. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 97077795 93136760 +3357 chr4 + 190214555 112042611 112042610 112042672 62 TACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:....x.:..:...x..:....:...::x..:..xx...:...............x..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 103646810 86567745 +3362 chr4 + 190214555 112042611 112042610 112042680 70 TACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::..:.:.::...x.:..:...x..:....:...::x..:.:xx.:.................x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 103646818 86567737 +3264 chr4 + 190214555 112042612 112042611 112042675 64 ACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964821 14964820 14964884 79265519 79265518 79265582 64 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 97077791 93136764 +3313 chr4 + 190214555 112042612 112042611 112042677 66 ACATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 97077793 93136762 +3235 chr4 + 190214555 112042615 112042614 112042676 62 TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.:..:...x..:....:...::x..:..xx.:.................x..... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 103646814 86567741 +3555 chr4 + 190214555 112042615 112042614 112042682 68 TATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x....:xx.:.................x..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 103646820 86567735 +3328 chr4 + 190214555 112042616 112042615 112042674 59 ATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx...................x..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 103646812 86567743 +3095 chr4 + 190214555 112042617 112042616 112042667 51 TATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..:..:..x:x..............:.x.:.:...:.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 23895437 NA +3016 chr4 + 190214555 112042636 112042635 112042707 72 ATATATATATATATATACACACACACACACACACACACACACACACAGTATATTTGTATCTATTCCTCCAAG chr4 - 94230402 45922266 45922265 45922337 48308066 48308065 48308137 72 ATTTAAGTATATATATACACACACACATGTATTTAAAGACACACATAGTTTGGTGGAAAACATTCTTCCGAG ..x..x:....................:::.:x:.x.x.......:...x.:x.x.x.xx:....:...:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 66120370 NA +3179 chr4 + 190214555 112044324 112044323 112044418 95 TGCCTACGATTTAATACTGACTCCTCTGCTTACCAGCTGTGTAGTATTCAGCAAGTTACTTAACCTCTCTGTATCTCAATTTTCTCATGTATAAA chr4 - 94230402 60684655 60684654 60684749 33545654 33545653 33545748 95 TACCTCAGACCTGTTCTTGGCCCCACTGCAGACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAA .:...xx..::.:x.x:..:.:..x....xx..:xx.....:...x.xx:......x.:x.x..........::.:.x....:...x.x.:.... 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% 51359669 NA +9110 chr4 + 190214555 112054299 112054298 112054540 242 AGTTGCACAGCTCCAAGCAGAAGGTTTATGTTCATTTAAGAGTGGAAAATTTTCAAGTTCTTCCAGAAGCACCATCTGTTTCTACTGGCTCGTCATGGTTTGAATTATTTATTACAATAACCTCAGATTTATTGGGTTAACCTTTGGATTGACTCCTAAAATTAACTATTGAATATTTATTATTTTTTCAGTAGGATAGTAGAATACAAAAATTAATTTTACCCTAGTATTGAAAGCACCTT chr4 - 94230402 35418587 35418586 35418823 58811580 58811579 58811816 237 AGCTGCCAAGATCCAAACAGGAGGTTTACATTGAACTAATGGTGAAAATGTTTACGGCCCTTCCAGAAGCACCATCTGTTTCTA-TGACTGCTCATTGTTCAGATTGTTTATGAGCATAATTTTAGATTTATCTGGTTAACCTTTGGATAGCCTCCTAAAA-TAACTATTG-ATTCTTAGAGTTTTCAAGGTAATATATTAAGAAGC--AGTTTAGTGTTATTATTTTATGGAAAGAACTTT ..:...xx..x.....:...:.......::..x.x:...x:...:...xx...xx:.::.........................-..:..xx....x...:::...:.....x.xx....::.:........:x...............x.x.........-.........-..x:...xx:....:xx:...:x...x..::.x:.--.:x...:.x...::x.xx...x.....x..:.. 84M1D76M1D9M1D35M2D33M 170/237 71.7% 237/94230402 0.0% 5/237 2.1% 76635712 NA +3007 chr4 + 190214555 112111466 112111465 112111503 38 GCTTTTTGTTGTTTGTTTTTTTTTTTTTTCTGTGGCAA chr4 - 94230402 38284983 38284982 38285020 55945383 55945382 55945420 38 GCCTGTTGTTTTTTGTTTTTTTTTTTTTTCTGTGGCAA ..:.x.....x........................... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 73826483 NA +3348 chr4 + 190214555 112118068 112118067 112118157 90 AAAAAGTCTATACGTATCT-TTTGCCTCTCTCTC--TATATATATACATACATATATATATACACACACATATATATACACATACACACACAC chr4 - 94230402 80495402 80495401 80495494 13734909 13734908 13735001 93 AAACAGTTAATTTGTGTCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ...x...:x..x:..:..:-....:..:......--:.......:...x...x....::.:......x..xxx:..:.x...:....:.x... 19M1I14M2I57M 64/90 71.1% 93/94230402 0.0% 3/90 3.3% 31622666 NA +4042 chr4 + 190214555 112118091 112118090 112118168 78 CCTCTCTCTCTATATATATACATACATATATATATACACACACATATATATACACATACACACACACACACACACACA chr4 - 94230402 7596402 7596401 7596479 86633924 86633923 86634001 78 CTTCATCTTCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA .:..x:::..:...:.x..:......x..:...........:...:....:.x.....:..x:..:...:...:.x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 104521689 85692866 +3252 chr4 + 190214555 112118101 112118100 112118176 76 TATATATATACATACATATATATATACACACACATA--TATATACACATACACACACACACACACACACACATATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:.:.:....x.:..:...x....:.:::..:--..:..xx.:.:...............x.....x..:x... 36M2I40M 54/76 71.1% 78/94230402 0.0% 2/76 2.6% 103722308 86492247 +3266 chr4 + 190214555 112118101 112118100 112118170 70 TATATATATACATACATATATATATACACACACATATATATACACATACACACACACACACACACACACA chr4 - 94230402 14964814 14964813 14964883 79265520 79265519 79265589 70 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.:x.:.:.x...::.x.:::.:.:.....:::...:....:...xx........::............ 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 97153287 93061268 +3505 chr4 + 190214555 112119043 112119042 112119172 130 AGGGGAGGGAAGAGGGGAGGAGAGGGGAGAGGAGAGGGGAGAGGGGAGGGGAGGGTAGAGGAGAGGAGGGGAGGAGAGGGGAGGAGAGGGGAGGGGAGAGAAGAGAGGGGAGGGGAGGGGAGGGGAGAGG chr4 - 94230402 8402735 8402734 8402861 85827542 85827541 85827668 127 AGGGGGTGGAAGCAAGGAGGAGAGTG-AGGTCAGTGGGCTGCGTGGGGAGGGACATGCTGGAAATGAAGAGGAGAAAGGGCAGGAGGCCCTAGGGGTGG--AGGGGTGAGAGGAGGTGGAAGGGAAGAGG .....:x.....x::.........x.-..:xx..x...xx.x.x..:.:..::x:.:xx...:.x..:.:.::..:....x.....:xxxx.....x.:--..:.:x.:....:.:x..:....:..... 26M1D72M2D29M 80/127 63.0% 127/94230402 0.0% 3/127 2.4% 103716308 86498247 +3005 chr4 + 190214555 112119079 112119078 112119148 70 GGGAGAGGGGAGGGGAGGGTAGAGGAGAGGAGGGGAGGAGAGGGGAGGAGAGGGGAGGGGAGAGAAGAGA chr4 - 94230402 47816938 47816937 47817007 46413396 46413395 46413465 70 GAGAGGGGGCAGCATGGGACAGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGA .:...:...x..x:x:..::....:..:::.:...x..x.:.....:x..x....:....:.:.::.... 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% 64302141 NA +3912 chr4 + 190214555 112119079 112119078 112119209 131 GGGAGAGGGGAGGGGAGGGTAGAGGAGAGGAGGGGAGGAGAGGGGAGGAGAGGGGAGGGG-----AGAGAAGAGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGGAAAGAG--AGAAGAGAGAAGA chr4 - 94230402 1312662 1312661 1312799 92917604 92917603 92917741 138 GGCAGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGA ..x..:.:..::::.x..::....:.x..:x..:..::x..:xxx..x..::..::::.:-----.........:..:.:....:.:...:.x.......:.:::.x:..:...:...x:.x.--..x.x........ 60M5I58M2I13M 81/131 61.8% 138/94230402 0.0% 7/131 5.3% 110806417 79408138 +3147 chr4 + 190214555 112119123 112119122 112119187 65 GAGGAGAGGGGAGGGGAGAGAAGAGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG .:........:...:....:....:..::.::x...x....:.::.::....x..:.:x.:.:.. 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% 43052438 NA +3201 chr4 + 190214555 112119136 112119135 112119222 87 GGGAGAGAAGAGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGGAAAGAGAGAAG-AGAGAAGAGAGAAAAGAAGAG chr4 - 94230402 76099078 76099077 76099164 18131239 18131238 18131325 87 GAGAAAGAGAAGAGGTGAGGGCTGGGGA-GGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAG .:..:...::.....x.....xx.....-.....x.:...:..:...:.::.xxx:.:...:x.:.-........:x.....:.x... 28M1D37M1I21M 60/86 69.8% 87/94230402 0.0% 2/86 2.3% 36020058 NA +3199 chr4 + 190214555 112119141 112119140 112119203 63 AGAAGAGAGGGGAGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGGAAAGAGAGAAGAG chr4 - 94230402 16966117 16966116 16966179 77264224 77264223 77264286 63 AGACTGGGGGTGAGGGAGATGGGGGGGAAAATAGAGGAGATGGAAGGAGGATAGAGGGAAGAG ...xx:.:..x.....:::x..:.....:.:x........x.::.......x....:...... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 95153024 NA +3159 chr4 + 190214555 112142320 112142319 112142363 44 AAACACACACACACACACACACACACACAAACAAAAAAAAAAAC chr4 - 94230402 56248441 56248440 56248484 37981919 37981918 37981962 44 AAAGACAAACACACACACACACATACACAAACAACAACAAAAAC ...x...x...............:..........x..x...... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 55893879 NA +3275 chr4 + 190214555 112168753 112168752 112168813 61 CTCCCGGATTCAAGCGATTCTCCCACCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGTGC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:..:......:.x...x.xx:x.........:...........:.:....x...::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 93971614 NA +7618 chr4 + 190214555 112171218 112171217 112171339 122 GGTAAACATTCCTAAAACCCACTGGACTTTCTGTACGAAGTGTGGCAAGCACCAACCCCACAAAATGACACAGTACAAGAAGGGCAAGGATTCTCTGTATGCCCAGG--GAAAGCGGTGTTACG chr4 - 94230402 92221722 92221721 92221845 2008558 2008557 2008681 124 GGTGAACGTCCCGAAAACCCGCCGGACTTACTGCAAGAAGTGCGGCAAGCACCAGCCCCACAAAGTCACCCAGTACAAGAAGGGCAAGGACTCTCTCCATGCCCAAGGTGAGGGCGGAGATGCG ...:...:.:..x.......:.:......x...:.x......:...........:.........:.x..x....................:.....x:.......:.--..::....x.x.:.. 107M2I15M 99/122 81.1% 124/94230402 0.0% 2/122 1.6% 19949496 NA +8733 chr4 + 190214555 112171391 112171390 112171510 120 AAAACTACAAAGATGATTGTGCTAAGGCTTGAGTGTGTTGAGCC-AACTGCAGATCTAAGAGAATGCTGGCTATTAAAAGATGCAAGCATTTTGAACTGGGAGGAGATAAGGAAAGAAAGG chr4 - 94230402 92222922 92222921 92223042 2007361 2007360 2007481 121 AAGACCACAAAGAAGATTGTGCTGAGGCTGGAGTGTGTGGAGCCCAACTGCAGGTCCAAGAGGATGCTGGCAATTAAGAGATGCAAGCACTTTGAACTGGGAGGAGACAAGAAGAGAAAGG ..:..:.......x.........:.....x........x.....-........:..:.....:........x.....:...........:.................:...:.:....... 44M1I76M 105/120 87.5% 121/94230402 0.0% 1/120 0.8% 19948469 NA +3277 chr4 + 190214555 112179913 112179912 112180026 114 TGATATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTATATATATA----------------TATCACATATATTACA--------TAATGTATATATATTATGTAATACTGCACAGCCCTAAAAAA chr4 - 94230402 48089490 48089489 48089626 46140777 46140776 46140913 137 TGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATC-TGTAAAACTGTACCACTGTGAGAGA ...:x.x.:..x:.x.:......:.:..:.:...:....x.x......:........----------------.:.x....x....:..--------x....:.:.:....:-.....x....:..x:.:x.:.:.:. 57M16I16M8I15M1D25M 79/113 69.9% 137/94230402 0.0% 25/113 22.1% 64090423 NA +3068 chr4 + 190214555 112179913 112179912 112179964 52 TGATATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTATAT chr4 - 94230402 3262304 3262303 3262355 90968048 90968047 90968099 52 TGATATATTTATAAAGATATATACATGCATCTGTGTGTTTGTGTATGTCTGT ........x....x.x.......:...:..x.......x.....:...x.:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 108917609 81296946 +3083 chr4 + 190214555 112179923 112179922 112179971 49 ATATATATATATATATGTATATGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx.:..x:...................x:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 107773500 82441055 +3123 chr4 + 190214555 112179925 112179924 112179972 48 ATATATATATATATGTATATGTGTGTGTGTGTGTGTATATATATATAT chr4 - 94230402 4406423 4406422 4406470 89823933 89823932 89823980 48 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATAT ...::........xx....x................:...x:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 107773502 82441053 +3252 chr4 + 190214555 112179944 112179943 112179987 44 TGTGTGTGTGTGTGTGTATATATATATATCACATATATTACATA chr4 - 94230402 63396167 63396166 63396210 30834193 30834192 30834236 44 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATA ...............:.............x.:.:.....::... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 48783777 NA +14771 chr4 + 190214555 112186663 112186662 112186940 278 CATGTTTTGTCTTTTTTTTTTTT-TTTAAAGGATGTTGAAGACTCACAGAACCACACTGGTGAGCCGGTTGGAGATGACTACAAGAAAATGGGAACACTTTTTGGTGAACTGAACAAAAACCTTATCAACATGGGCTTCACAAGGATGTATTTTGGAGAACGAATAGTGGAACCAGTAATAGTCATTTTCTTTTGGGTTATGCTGTGGTTCCTTGGCCTGCAAGCCCTTGGACTAGTTGCTGTTCTTTGCCTTGTTATTATTTATGTGCAACAGTAAAA chr4 - 94230402 35445028 35445027 35445306 58785097 58785096 58785375 279 CGTATTTCTTATTTTTGTCTTCTATCTGCAGGTCCATCAGGAACAAAGAAACCATGCCACAGAGCCTGTAATAGACGATTATAAAAAGATGGGGACTCTCTTCGGCGGACTGAACAAAAGTCTTATCAGAATAGGCTTCACAAGGATGTACTTTGGAGAACGGATAGTAGAGCCTGTAATCATTATATTCTTCTGGGTTATGCTCTGGTTTGTCGGCTTACAAGCTCTTGGACTAGTTGCTATTCTGTGCCTTGTCATTATTTATGTACAACAGTAAGA .:.:...:x.x.....x.:..:.-.:.:x...x:xx.x.:..x:x.x::.....::.::xx.....x..x:x...:..:..:..:..:.....:..x..:..:..:.:...........::.......:x..:.................:...........:.....:..:..x.....x:.:..x.....:...........x.....:x.:...:.:.....:...............:....x........:...........:.........:. 23M1I255M 207/278 74.5% 279/94230402 0.0% 1/278 0.4% 76741635 NA +3024 chr4 + 190214555 112200100 112200099 112200141 42 TCTCTGTCTCTCTCTCTCTCTCATACACACACACACACACAC chr4 - 94230402 51342067 51342066 51342108 42888295 42888294 42888336 42 TCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC .......................:.......xx..x..x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 60858033 NA +3164 chr4 + 190214555 112210031 112210030 112210143 113 AGAGGAAGAGACAGACAAAGAAGGAGTCAAAGAGAGAGACAGAGAGAGGAAGAGACAGAGAGAGAGAAAGTCAAAGAAGGAAAGAG---AGGAAGAG----TCAAAGAG-AGAAGGAAAGA chr4 - 94230402 3088821 3088820 3088936 91141467 91141466 91141582 116 AGTGGAAGA-----ACAAAGGAGGAGCTATAAAGTAAGAGGATGAGAAGCAGTGAGAGGATGTCAGTAAGTCAGAGAAGGAAAGAGTTTCTGATGAGATTTTCAAAGAGTAGGAGATAAGA ..x......-----......:.....::.x.:..x:...x::x....:.x..x..x..::x.xx..x......:............---xx..x...----........-..:..:x.... 9M5D72M3I8M4I8M1I11M 79/108 73.1% 116/94230402 0.0% 13/108 12.0% 109121210 81093345 +3093 chr4 + 190214555 112224486 112224485 112224548 63 TTTCCTTTTTCTTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAG chr4 - 94230402 49339959 49339958 49340021 44890382 44890381 44890444 63 TTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAG ....:....xx.x.x.:.:.:...:...:...:.:.............::..x..::.x.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 62884527 NA +3217 chr4 + 190214555 112227341 112227340 112227407 67 CTTCAGAATAAAATACT---------------TGAGAGAAGAAAATGTTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 6378641 6378640 6378722 87851681 87851680 87851762 82 CtttaaaaaaaaataataataaCTTGCCTTGATAAAAGATGAAAATGCTGTGGGTTTTTTTGGTGTTTTTTTTTTTTTCCTT ...:.:..x......x.---------------.:.:...x.......:.............xx.x.............::.. 17M15I50M 54/67 80.6% 82/94230402 0.0% 15/67 22.4% 105848700 84365855 +3017 chr4 + 190214555 112227373 112227372 112227414 42 TTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG chr4 - 94230402 9812713 9812712 9812754 84417649 84417648 84417690 42 TCGTGGGTATTTTTTTTTTGTTTTTGTTTTTTTTTTAAGACG .:......x..........x.....x..........:..... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 102414660 87799895 +6707 chr4 + 190214555 112231702 112231701 112232236 535 GCGAGCAGGGGCCTGGGCGCGCTGGGGGCGGGGCCAGGGTGCTCGGCTCGCGGGGACTGGCCTCCTTCGGCAGCTGGAGGCGGTCACTCACGCTGGGCTAGGAGCTGAGGCGAGAAGGGCCATGCGGACGGCGAGGGAGTCCAGAGCCTTGAGCCCG----GTGCTCCTCCCTCGCGCAGCGGTGGCTCTGCGGCCGCTGGAG---TAAACACTGCCTTTGTTCCCTAGCGCCTCGTCTTTCGTCGCC----CCGTGCCCTCACGCCGCCGGGCTCTGGCCGGCCCGCCCTCGGTCCTTGAACCCCATTTCGGCTCGTGCCGTGCGGATGCAGCTGCCGGGCCTGGGTTTGGGCATTGAGCGGGAGGAGGAGGAGGAGCGGCGGCGCCTGGGCGGCATGCGATGGGGAACTGCTGCTGGACGCAG---TGCTTCGGACTG---CTTCGCAAGGAAGCGGGGCGGCTGCAGCGAGTAGGCGGCGGCGGAGGGTAAGCCCGCTGGGGGAGGGGCCCGGCCCCCGTGGCTCCTCCTCTTCGGCCCCC--GGCGGGGA chr4 - 94230402 35463941 35463940 35464411 58765992 58765991 58766462 471 GCGAGGGGCGGGCCGCTGCCGCCCGGGGCGGTGCCAG--CGCGAGGCATGCGGCGTCCG--CCTCTGCGCTA--CAGGAGCGGC----------------GCGGCTGTGGCG-GCGGGGCCATGAGGCCGT---GGGCGCCGAG---CTTCCGCCCGCCTCTTTCTCCTTCTTCTCCTCCTCTTCGCCCGACGGCCGCGGCGGGCCCAGTCGGGCCCTTTGTTCCTTAGGGTAGCGGCTCCCCGCTCCTCTGCCGCGGCTGACCGCCTCGGGGCGACCGCTGGCGG---CGCGACCGTTGGGC---------------GCCGCGTGG-------CGCCGCGCGAGGA-----------GGCGGTGGGAAAAGGAGGAGCAGCAGTCGCCGCCCAGGATGCGATGGGGAA---CTGCTGGGCGCAGGGCTGCTGCGGGCTGCTCCTCCGCAGAGAAGCGGGCCGGCTCCAGCGA---------GGCGGAGGGTAAGCA----GGCGGCGCGGCT--GCCCCTCTTTCCTCTCCTCTCCCCTCCCCGGGGCGGGGA .....x:.x..x.:.xxxx...:x.......x.....--:..xx...x:....x.x.:.--.::..x..x:.--::.::....:----------------.x:....x....-.x:........x..x..x---...x.:.x..---...xx.....----x.x.....:.:..x.x:xx:xx.x..:.x:.......x.x:.---:.:x.:xxx..........:...x.:xx..x..::.xx.x..----...:.x.:xxx....x.x....xx:x..:...xx---.x..::.x...::.---------------....:.:..-------:....x..xx..:-----------:....x:...::.........:..:.:xx.:.xx.:.x.............---.......:.....---....x...:...---..:....::........x.....x......---------..............x----..x..x.x...:--.....:x.xx.::.......:.xx:....--........ 37M2D20M2D11M2D10M16D12M1D18M3D10M3D10M4I42M3I42M4I34M3D14M15D9M7D13M11D51M3D13M3I12M3I30M9D15M4D12M2D29M2I8M 306/452 67.7% 471/94230402 0.0% 102/452 22.6% 76767761 NA +3120 chr4 + 190214555 112233642 112233641 112233713 72 AAACTTTATATTTGACTTTGGACTACATGATGTGTCTGTGGACTTTAGTTTTGTTTTTTTCATGGGGTCTCC chr4 - 94230402 9313487 9313486 9313553 84916850 84916849 84916916 67 AAACCTTTTATATGCTTTTGGGTTACATTATGTGTTTGTGGAC-----TTTTTTTTTTTTCAGAGCATCCTC ....:..x...x..x:.....::.....x......:.......-----....x.........x:.x:..::. 43M5D24M 51/67 76.1% 67/94230402 0.0% 5/67 7.5% 102920155 87294400 +3275 chr4 + 190214555 112243697 112243696 112243763 67 ATCATTTCCAACTTCTTTTTTTTTCTTTTTCTTTTACAAACTACCTCAATTTGTGCAAGGAGATAAA chr4 - 94230402 47299738 47299737 47299804 46930599 46930598 46930665 67 ATCATATTAACCCTCTTTTTTTTTTTTTTTCTTTTCCTAACTACAATAATGTCAGTAATGAGATAAA .....x.:x.x.:...........:..........x.x......xx:...x.xx.:..x........ 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 64943959 NA +4779 chr4 + 190214555 112253175 112253174 112253283 109 TGTTTTTTAAAGTTATTCTG--TTTTCCTTCCCAGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGGTAAGTAGT----CCTTAATTTGATTGAATT chr4 - 94230402 35469405 35469404 35469519 58760884 58760883 58760998 115 TATTCTTTAGAGTAATGCTGGACTTATTTTTCCAGGTCAAAGTACTTTAGAACATGTTCAACAGGAGAGCACTTCACTATAGAGGTGAGCATTTATGCTTAAATCAGGTTGGGTT .:..:....:...x..x...--:..x::..:....:..x.....:...........:....x...x........x..x........:..:.x.----.:.x...:x.:...::.. 20M2I71M4I18M 81/109 74.3% 115/94230402 0.0% 6/109 5.5% 76783770 NA +4099 chr4 + 190214555 112254725 112254724 112254802 78 GCTTACTTTTTTGTCCTTTCAGTTTGAGAATCTAGTAGAAAGTGATGAAGTAAGTATTTCCATAATAGTACAAAACTT chr4 - 94230402 35470993 35470992 35471067 58759336 58759335 58759410 75 GTTTACTTTTT---CTTTGCAGTTTGAGAACCTCGTGGAAAGTGATGAGGTAGGTGCTTGGATCATAGCATGAAACTT .:.........---.:..x...........:..x..:...........:...:..::..xx..x....:.::...... 11M3D64M 59/75 78.7% 75/94230402 0.0% 3/75 4.0% 76783732 NA +6866 chr4 + 190214555 112260727 112260726 112260871 145 TTTGTTTTTTCTTTTTCTCCTCCTCCTTTTTTTCTCTAGGCCTCTTACTGAGGAAGAAATTGTTGACCTAAGAGAAAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCAAAAAGAGGTAAATTGT chr4 - 94230402 35472721 35472720 35472858 58757545 58757544 58757682 138 TTAGTCTTTTTGTGTTTCTGTCTTGCTTTT-------AGGCCTTTGACTGAAGAAGAAATTGCTGATTTGAAAGACAGGCATTACGACTCCATTGCTGAAAAGCAGAGAGCTGTTGATATGAAACTTCAATCAGAGGTAAGTGGT ..x..:....:x.x..:::x..:.x.....-------......:.x.....:..........:...::.:.:...x........:..:........:.....:..:.:..x.x......x....x.....xx........:.x.. 30M7D108M 104/138 75.4% 138/94230402 0.0% 7/138 5.1% 76788006 NA +14894 chr4 + 190214555 112262879 112262878 112263132 254 TTATTTTTTAATAATTTATTTTTTGTTTTATAAATAGAAGCATTTTATTTTTAGAGCAGTTAGACAGGTTCTGATTTTTGTTAATCCTTATCGTTTTGTTCATGTACAGTTAGCCTTACAAGAAGAGAAGTTAAGACTAGAAGAAGAAGCTTTATACGCTGCACAGCGTGAAGCAGCCAGGGCAGCAAAGCAGCGAAAGCTCTTGGAGGTGAGGGG-AAAAGACCCCAGCATATATTAGGGTTGCTTTTCTCCTT chr4 - 94230402 35473543 35473542 35473795 58756608 58756607 58756860 253 ttattttGTAGTAGCTCTTCGTTTGTTTTATTGAACTTATGATTTTACTCATAG-GAAGATAGATAGGTTCTG-CTTTTGTTAACCATTACTATTTTGTTCATATACAGTTAGCCTTACAAGAGGAGAAGTTAAGAATAGAAGAGGAGGCTTTTTATGCTGCACAACGTGAAGCAGCCAGGGCAGCAAAGCAGAAAAAGCTCTTGGAGGTGAGGGGAAAAAGACCCCAATATATATCAGAGCTTCTCTTCTGTTT .......x..:..::.:x.:x..........x:.xxxx.xx......:.:x...-.x..x....:........-:.........:.x...:::..........:...................:............x.......:..:.....x..:........:...........................x:.....................-...........::......:..:.:.x..:....x:.. 54M1D18M1D142M1I38M 205/252 81.3% 253/94230402 0.0% 3/252 1.2% 76789336 NA +5344 chr4 + 190214555 112265709 112265708 112265883 175 AAAAATTA---TTTCACTTTTATTACAGTTCAGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGTAGTAAG------TTTTTTAAAGTATTTTCT---------------------------------GTACTTTTTATGCCACAGTAAACAGATAAGTAGAGATTCTGGCT----------CTGTTTCTG chr4 - 94230402 35477960 35477959 35478181 58752222 58752221 58752443 222 AAAAATAAAACTTGCACTGTTCTTACAGCTCTGTGATGGAGGAAGATTTTGATTCTTTCTTAAGAAATACAAAATTCCAGTATGAAGCTTTTCGAAGTAGCAGTAAGTCTTCCTTTTCTGATGTATGTCTTTAATGTAAAGTGACTCTGAGGAGCACAGAAGTGATGCTTTTTTCCCCAC-----ACAGATAAGTATAGTTTTTAGTTTCTATATGTACTGTTTTTG ......x.---..x....x..x......:..x.x:x::..:..x..:..:..x....x:..:.......::..:.:x..........:............:......------....:.:.x....x.::.---------------------------------:.:......x:x....-----...........x..x..:.:.:.----------......:.. 8M3I96M6I18M33I16M5D23M10I9M 127/170 74.7% 222/94230402 0.0% 57/170 33.5% 76787749 NA +3399 chr4 + 190214555 112266032 112266031 112266093 62 TCAAGCACTCCTTTTTCCATTTCTACTCTGATCCTAACCCTTCCCTTTCCAAAAAAAAGAAA chr4 - 94230402 2981842 2981841 2981903 91248500 91248499 91248561 62 TCAAAGACTCCCTTTTCCATTTCTGTCTTGACCTTCACTTCTCCCTGTCCAACAAAATGAAA ....:x.....:............::::...:.:.x..:::.....x.....x....x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 109284190 80930365 +10743 chr4 + 190214555 112266560 112266559 112266734 175 ATTCAATTGTATTTCGTGTATATTCT-----AGGACTCTCATCAGATGCTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATCAACTAGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGT-ATTTTATAATTCACAA chr4 - 94230402 35478494 35478493 35478674 58751729 58751728 58751909 181 ATTCAAGTGTTTCTGAATAATGTTTTTATACAGGACTTTCATCTGATGCTACAGTGCTGACACCAAACACAGAGAGCAGTTGTGACTTAATGACCAAAACAAAATCAACGAGTGGAAATGATGACAGCACTTCATTAGATTTAGAGTGGGAAGATGAAGAAGGTAAATTTGTCATTTATAA ......x...x.:.x:xxx..:..:.-----......:.....x...........x:..........:.....:...........:..............x........x...........:........x..x......:.......................-.x...:.x...:.:.. 26M5I133M1I16M 147/175 84.0% 181/94230402 0.0% 6/175 3.4% 76788066 NA +21130 chr4 + 190214555 112268117 112268116 112268643 527 TTTTTGAAAACTCTGTTCAAATCATAGGAATGAATAGAATGCTTCCAATGAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGAAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGATGATAATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATTCTGACACAGATCAACAGACTCGATAGGGTAAAATTGTGTGACCTTGTTTATCAGTTATGACCAAATG-TTAAAAACCAACTAGAATGTATAAGTGATTGTGCTTAGCCTTTTTGTAAGGGAGATGTGTAAGAAACCATGTTGTAAATGCTTAT---TTTATTACAAAGGAGTAGGGATGATAGG--ATCTGAATTGATACAGAATTAAGTGCAATTTCATCATCTGCCTTCT-GCTTTTCAAGACCAATTTAATGGTCCTGTCATGT chr4 - 94230402 35480543 35480542 35481048 58749355 58749354 58749860 506 TTCTCATAAACACGTCTTAAATTGCAGGCATGAACAGAATGATTCCAATGAGAGAACGCTCAAAAACAGAAGAAGACATACTCCGGGCAGCACTGAAATTTAATAGCAAGAAGACAGGAAGTAATCCAGCTTCAGCTTCTGATGATTCTAATGGATTGGAGTGGGAGAATGACTTTGTTAGTGCTGAAATGGATGATAATGGCAATTCAGAATATGCTGGATTTGTAAATCCTGTATTAGATTTGTCTACATCAGATGTAAGGACATCTGATTCTGATCAACAGGACAGGTA--GTGAAGCTGTG-GCCCTTGT-------TTGTGACCAAATGTTTAAAAGTGAAATAGAATGTACAA--AAATATATT--ACTCTTTTATAACACTGTT----------CCCTTCTTT---TTCTTATAAATCGATCAGCAAGGAATAGGAAAGACTTGCTATCTG-ATTAATTCAGAATTAAGTGCAATTTTATCATCTACCTTCTAAACTTTTGTGAAAACTGGGATGATTCTATTGTGT ..:.::x....x.xx:.:....:::...x.....:......x................:..x........:........x..x...........x..:.x..::.:.........x...........x:.x.....:...........:.....::..........:.....:...........:.................x.....x..:...x.........................x:.....:xx..x.:::.....xxx.....:x.x.........:x:x.:..--..:..::....-.x......-------..:..........-......::x..x.........:..--:.x.:.::.--:.::....:...x:xx.x.----------..x.x:.x.---.x.....---.:x..:.xx.....:....:.x..:xx.--.....-...:..x..................:.......:......-:x:...::x..xx.x.xx:...:.:..:.::... 292M2D11M1D8M7D13M1I24M2D9M2D19M10D9M3D7M3I28M2I5M1D40M1I34M 377/499 75.6% 506/94230402 0.0% 35/499 7.0% 76787574 NA +7110 chr4 + 190214555 112269720 112269719 112269952 233 CTGTAGTTTTATCTCCTTTTTTATGTCATAGAAATTAATATGATACTT----TAAATATGTAAATATAATACATTAGGTAATGCTA--------TTATTTATA----TCTGTCTTAACATAATTTAAGTTGTAGCTGTGTC-TTGGAAATATTTTTAAGGTAAT---CTATATTCACATTGCCTGTGTTAATGCTTTTTAAAGTTTGTATACATCAGATGTATATTTTTGGTTTGGCATAAGCTACGATTGTA chr4 - 94230402 35482196 35482195 35482441 58747962 58747961 58748207 246 CTGTAATGTGGTCCTCCTCTTGACAACTTAAAAAATCCTGC-ACATTTGGATTAAATATGTACATATATCAACACTGGCAAAGATAAAAATCTTGTGTTGATAACATTCCGTTT---CTTAATTTAAATTGTAGCAATGCCATTGGAAATATTTT-AATGTAATTACCTGCATTTGCAATGCCTGTAATA-TGCTTTA-AAAATTTGTACACATCAAATGTATATTTTTGGTTTGGCATAAGCTACTACTGTA .....:.x.x:..::.:.:..x.::x.x..:...x.xx.::-.:.:..----..........x.....x:.xxx:x..:..x.x..--------x.:..x...----..:..:.---.x........:.......x:..:.-.............-..x.....---..::...::..x.......:x..-......x-...:......:......:.............................x.:.... 41M1D6M4I34M8I9M4I7M3D24M1I13M1D8M3I23M1D7M1D54M 170/226 75.2% 246/94230402 0.0% 27/226 11.9% 76787524 NA +19610 chr4 + 190214555 112277826 112277825 112278420 595 TCATCCATCATATTTCTCCTCTTAGACTTTCTGTGTTCATGACTCATTTTCATCCATTTCTGTCGGAGAACTGCTTTGGGAGGAGCA-----GAGCGAATAAGTGCCATACTCCGGTATGGGCCTGTGTGGTGGCCAGTTGTTTTCTTGCAAGAGTGATCTTGGAGATAAAATAAATTGAGTCTCAAAAAATTCCAATGACTCGCCATCTTCCTTCTCCATCAGAAACTGATACTCTCCGAATCTGACCATGCACCTGTATGGCAGGTCCATTTTATTTAGGTAGCCCAGCTCTCTGCTGTCCACGATCAGATTGGTCTTTTTACTCATATTTTTTATTTCAAAGGAGAGAACTGAGCTGTTGAATTTTTTAAACAGCTGCAGAGAAAACTGAACTCGGGAAACCTGTTTGTCCTGAAAAGTATAATGACAGATGTTGGAATTTCGGCCAAATTTCACCACTTCGCTGGAAGGGAGTTTCTCTCTGTTA---AAACTTATTGACTGAAATATTCCACACTGCAACTGGCCAGGATGGTAAACCGTCATCTGGAGACAAGTTACTGTCTCTTCTGTGTCAGCATCTTCAAAACTGGTCATGATG chr4 - 94230402 35488308 35488307 35488897 58741506 58741505 58742095 590 TCATCCAGC------CTCCTC-----CTTGCTGTTAGCATGACTCATTTTCATCAATCTCTATGGGGCTTTTGCCTTGGGAAGGAGACAAGGAAGGGAATA--TGCCTTTCTCAGGTACAGGTTGCAGCGATGGCAGGCACCTTTCTTGTAAGATTGGCACTTTTGCCAAGTGTAAGTGAGTCTCGAAATAATCCATGGCCTCTCCTTCTTGAATCTCTGCTAAAATCTGGTAGTCTCCAAAACAAATGATGCACTTCCATGGCAGATCAACTTTGTTTAAGTAACCCAGTTCTGTTTGGTCTACAGTCAGCTTTGTTTTCTTGCTCATGTTCTTTATCTCAAAACAAAATTCAGAGCTGTTAAGTTTTCTGTAGAACTGCAGTGAAAACTGGATCCGAGAAACACGAGTATCCACTAAGTTATAATGGCAGACATTAGAATCACGGCCAAACTTGGCCATTTCATCTGCCCTGACCTGTTCTCGCTTACAGAAATTCAAGCAACGAAACATCATCTTGTCTTGTTGGCAAGGATGGTAAAATGTCATGTGGAGGCATGTTGCTGTTTCTTCAGTTTCATCTTCTTCAAAAGAGGTCATGATG .......x.------......-----...x....xxx.................x..:...:.x..:xxx:...:......:.::x.-----:..x.....--....x.x...x....::..::xxx.:.:....x:.:xx:.......:....x..::x:.xxx.x:..:xxx..x........:...x.x....xx.x...x..x....xxx....::::.:..x...:..x.....:..x.x:.:x......:.x:.......:..x.:...:....:...:.....:...x.x:x...:..::....x..x..:..:..:.....:..:.....:.....:x.:.:xx.x........:.:....:.:x.x.:......x........:.::..:.....x:.xx.:...xxx..:x.......:....::..:....:x........:..x:...:...:::x.xxxx..x:.x:....xx...---...:.:.xxx.x:....:..:x:x:xx.x:x::....x...........x:.....x.....:..x...:....:.....x..x...x.x.........xx.......... 9M6D6M5D61M5I9M2D386M3I111M 390/582 67.0% 590/94230402 0.0% 21/582 3.6% 76789518 NA +3126 chr4 + 190214555 112284877 112284876 112284925 49 TTGCAAAAACAAAGAATCAAAAAAAAAAAAAAAAAGTGAAAACCAAACA chr4 - 94230402 15969851 15969850 15969899 78260504 78260503 78260552 49 TTGCAGAAATAAGCAATCAAAAAAAAAAAAAAAAAGACAAAATTAAGCA .....:...:..:x......................xx....::..:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 96315026 93899529 +3020 chr4 + 190214555 112324449 112324448 112324488 40 TTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTT chr4 - 94230402 35056090 35056089 35056129 59174274 59174273 59174313 40 TTTGTTTGTTTGTTTCTTTGTTTTGTTTCATTTTTTTTTT ...............x............::....x..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 77268359 NA +41978 chr4 + 190214555 112340031 112340030 112341735 1705 AATTCTCCCTGATGAAAA-CAGAAGGATTTCACAGCACAGAAAGCAGTGGTTTATGAGTCTGGGTATGGACAGACACACAAGAGAACTCTGTTCA-TCGTCTTCAAAGTGATGCAGCGATGGCAAGACTGCTGCTGTGGCCACATGTAATATAGCCTGTAGCTCTTTAAAGAGGATTAGCCTTAGTGCGCTGGGAGCATTCAATGCTGGATTTCATGTAGAGCAGAATATGCTAATGAAATGTAAATGTCTACGGCAAACATTGCGTAATATAGAAAACCTTCAAAACTGAGCTTTGTCTCTTG----CACGGTGGGAAACCAAACTTT---ATTACATC----------AGAAAAAAGTAAAA---------------------------AAGAAATAACCTTATACTTTTCTGTCCTATGTATCTGCTTCTAAAAAAAAGTGAAGTTAAATGCATAC------ACATACGTATTTATACTTAAATTAA------ATTTCAATGTTAT----------TAGAAAAAGTAATTTCAGTCACTCAAAAA--------------TCTCT------------------------TACTAGATCTATGCCCT-------------------TGGGTGG-----------------ATGTAAAATCATTTATCTCTGAAGAAAAAAATACACATAATATGGATTTTCTTAAACACTGTTA------TTAAGATTACAAAGG--------GCTTACAGAGTAGATTCCCCCCTCAACCCTTTTCACCTGAAAATTTCTTATTTGTGATT----TCCACTTTGTGCGTGAGCAATGTCCTTCTACTCAATGTTGGGAAATGCTACATCTTCATAATTTTCCACATAGTGCTTTTACT--------------ACTTCATAGGAAGTCGGTATGAGATTTGATCAGTTTTTTAAAACTGCACATGCACTTAGTTAAGATATCAAAGTTATTTTCATTTTAG---------------TATTAGAATTTCAGAACGCATTTGGTATTAGGA---------AAGT---------GAATTCACTGTAAGATGTGT----------GATTT---------------GCAGTCCATGTA----------ATGATGTGTAGCATCTT------TGAATT---CACGCACGTGGTTCCCAAAG------ATTGAAA-----GCCCCCTAAAGA-----------------------------------TTTTATCTCAAT---------------------------TGCTGGGAAAT-----------AAAGATCCCAGCAAACACATGGAACTGGGTGC----------------------TTAGTTACTAGCATTTCCCTACACTCAACCAAGTAGCTTAGGTTCTCTT-------GGTTTTTGTTGGTCGGTGGTGTGTGTGTCTGTGTGCGTGTGTGTTTTATATCTCAGTTTT--GAAGGGTTTGTCTCTGTAGACATAGAGGGATGGTAATACATATTCATGAAAGCGTGTTCTTTCCAGTCCCTGTTAACACTGACAAAGCCTTAGCTGTTTCACACAGCAAGCTGACTGGGATTGTGTGTGGGGGCTGCATGGCCAGATTAGTGCAAACAGCAAGCCCACTCTGCTGCTCGTTAGGCCTTGCCTTCCTGACAATTTCCCCAATTGTCGCTTGTGACAAGGCTGTCATTAGGTGATGGCTTCTTTTGGCCATTTTCAGATAAAGATAATTTCCTTAACTTCCATTTTATTTGACAACAGGCAGTTTGGGAGAGAAAGGAAGTGCTTCAGTAGTATATAGATTAGGGTTTTGTCACTTCAAAGCCATCTTTGATCTAAAAATATGTGCTGTACCAAATTCATTATGTC-----------------------TTTTTTTAAAGAGCTTTTAAATTTATTGATCTTCTCCTCAATTATTC---------------------TCCTTTTACGTCCAATAATGATGTGCGAGATGGTAGTGTTGGGCAAAGCCTAAGGAGGAGTGTGGGGTGAATGCAGCCAACTGGTCACTTCTGAG--GTCATTACAAGAACGAAACAACAGGTGCTTT chr4 - 94230402 35497728 35497727 35499715 58730688 58730687 58732675 1988 AAATCTCGGTGATGAAAAACAGTCGAATTTCGCAGCACAGGGAGCGTTGGTTTAGGGGTTTGTGTAT----AGCCTCACAAGGGAACGCTGTTCAATAGGCTTCAAAGTGATTCAGTCATGGCACAACCGTGGCTGTGGCCACATGTAATATACCCTGTAGCTCTTTAAAGAGGATTAGCCTTAGATCAGGGACAGCATTCATTGCTGGATTTCATGTAAAGTAGAGTATGCTAATGAAATGGTAATGTCTACAGCAAACATTGCATAATATTGTAAACTCTCAAAATTGAGCATTGTGTCATGATATCTCTGCTGGAAGTCTAACTTTTATATTCCATTTATTGCTTGGAGAAAAAAGTGAAGTTTTTAGTATTGCCACAACCTCTCAATAGTAAATAAGGATCTGGTTTGCAGTCTTAC------------------AAGTGAAGTTTAAAACAAACGTTTGAAAGTAACTTTTCAAACGTTGATGAATGCTTTATAACAATGTCCTAGCTCTCCAGCAGAGAGAAAACCCACCGCATCTTAAAACAGCTTCATCTGGGTTCTCTGTAACAAGCACGGTCTTCGTTCAATACTGCATCCCTGCCCTGCCTGCCATTCTGTTGCTCTGGGTGGTACGTTTGGGCTTATACGTGTGTCAGCATCAGTCT-TGCAGAGA--------TGCAGTAT---TTCTTGTAAACATTTCTGAGCCATTTCATCTTTTAAAGGCAGTTTCTGTCTGTATGTTAGCTTCCACTGGCAGTCCAGTAGTCTTGA------------TGTGGCTCTTGTCCAGTTTT----------ATGCCAGTTTTTTGAACGTGTGAAGATGT-------------------ACATAGTACATGTGTTTAAAAAGCCCCAAAACTTCA-AGGGAGCCAG----AAATTCAAACTGTCTGTT--------------------TTGAGATGTTGAAGGGATTTTATTTGTAGAAGGTCTTGAATACCTCTGAGAAATCCGTTCTGCTGTGAGCACTGGGCCTCCTCTGTAAGCCTCTGTTGAGAATGCACGGTATGATGTTTATTATGCCCGGATTTATCTTCATATTTGGTGCTATGCATGTGTATGCTTCCCAGGACGTGTGGCATCCTGATAGGTGACTGTGGCCTGGGCTTTGACCCCAAAGCAGCACATTCAAAAAAGTGCCCCATATAAAACACAGTGATGGACTTCAGGTAGCCCGACAGGCCATTTTGCTTCTGTGATGATTTGAAGTGCCTCCTGCCCATGTGCTGGGGATTGGAGCCTGAGGAAAGCCTTCGGGAAGAAGATGCTTCTGGCTTCCTTTTCAAAATGTCAGCTTTCCTTGCTTAATAGTTTTCCCCTG-GCACAACTCCACAGTTTAGGATTTTGTCGCTTCAGGATTTTTTTTATTGGTGATG-GTGGCTTGTTTTATTTATCTATTTCTTATTTTGGTGTTCGGAAGATTCTTTCTCTATAGACGTAGAGGGCTGGTGATACATATTCATGAAAGAGAAGTCCTCCTGGCCCTTGCTCACACTGACAAAGACTCGGCTGTTTCACACGGCGAGCTGTGCAGAATTGTGTG--GGGCCTGCCTGACCAGATTAGAGCAAACAGCAAGCTTATTCCTCCCGTCGTTAGGCCTCGCCTGCCTAACAATTTCCCCAATTGTCATTT-TGACAAGGCTGTCATTAGATGATGGCTTCTTTTGGCCATTTTCAGATAAAGATAATTTCCTTAACTTCCATTTTATTTGACAACAAGTAGTTTGTGAGAGAAAGGAAGTGCTTCAGTGGTTTACGGATTAAGGGTTTGTCACTTCAAAGGCATCTTTGATCTAAAAATATGTGCTGTACCAAATTCATTATGtctttctttctctctctctttttttttttttttTTGGACTTTTTAATTTATTGATCTGCCCCTCAATTATTCCtttttttttttttttttttttttttttGCATCCCCCAACAGCACACAACA----------GAGCAAAA-------------ATGAGGGGAAAGAGCCCAGATGG-CACCTCTGGGAAGTCACCATCAGGACAAAACAACAGGTGCTTT ..x....xx.........-...xx.:.....:........::...:x.......x.:..:..x....----..x.x......:....x.......-.x.x............x...:x......x:..:.:x.....................x...............................xx.:xx.:x........x................:..:...:...............xx.........:...........:......x.x....::......:.....x....x..x..----.x.x.:x....::.x......---...x...:----------..........:..:---------------------------.:x......xxx.x.:x...x.x...:..:------------------..........x..x:..x..------.x:..xx.x..:.x..x.x:..x..------..xx......:x.----------:...:.:.:x.x::x.x.:xx..:....x--------------.....------------------------....:x...:x......-------------------.......-----------------:...:xx.x...:x:...-..x...:.--------:::.:...---..:.:x......:.x:.:------..x.xx..x:.....--------.::.::.x:x...x....x.:xx..::..xx.xxx.:...------------....::.----....x...x----------...:.xx.:.x:.x..:..xx.:.:...:-------------------.......:.x.x.::.--------------......-...:..:.:.----.:...::.x.x..:.x..--------------------..:....:.::...xx.....xx..x...---------------.x.x....x.:.:xxx:..xx.x:.:.:.:..x---------...:---------....x...x...x.....x.----------.....---------------..x:.x.....:----------.x..:....:.....:.------...x.x---.x:.x:.x.x.x:.......------...x...-----.....x..x.:.-----------------------------------....:::..x:.---------------------------.......:.x.-----------....x:::.:.x..:x.x...xxx....x.x.----------------------..:x...x...:x..:....:-:.x....:xx::..:.....x.:.:x.-------..x....x..x:.:....:..-...xx.:xx.x.::x.:.x.:...:x...:.::..x..--....:x.:.x.....:.....:.......x....:.................x.x:x..:.:.::.:..:..:.x............x..::............:..:.....xx::.:........--...x....x..:.........x.............::.:..:x.:xx...........:....x...:..................::..-..................:..................................................................:.:......x......................:..x..::.....:..x...............x............................................-----------------------.......xxx.::.....x.............x.:............---------------------.::....:.:...xx:..:::::::.:.x.----------.:.....:-------------:..:..x...x.x:x...:x...-...:....:.--....::.:x..:..:................ 18M1I48M4D24M1I208M4I21M3I8M10I14M27I30M18D20M6I25M6I13M10I29M14I5M24I17M19I7M17I18M1D8M8D8M3D18M6I15M8I40M12D7M4I9M10D29M19D16M14I6M1D10M4D18M20D29M15I33M9I4M9I20M10I5M15I12M10I17M6I6M3I20M6I7M5I12M35I12M27I11M11I32M22I21M1D27M7I21M1D38M2I127M2D90M1D194M23I47M21I30M10D8M13D23M1D10M2I31M 1166/1576 74.0% 1988/94230402 0.0% 541/1576 34.3% 76842303 NA +35095 chr4 + 190214555 112343645 112343644 112344287 643 CCTCGCTGCTGCAGGCCAGCCT-GATCCCATCTCCAAACACAAACACTTCTGCCTGGGTTTTGGCTGGGG--GTTGTGCTGTGGCCTCCCAACCCCCACCCTTTCCCCCCCTTCTCCCCCCTACCCCCGTTAATTGGCTGAGACCACCAGAATTTGGAGGACACAGATGTCACTGATAGTTTTCCTAGGGAGCACATTCATGCCCATCTGTTGCAGCCTAGAAGGCTGTTCATATATCCACAAGGCCTTCATTTAATTCTTGTCAGAAAGTAATGTAAATCCAGTTTACCTCAGAGGTCGCAGGCGAGATTTATGCCAATGAGCCCCCTGCAATTTACACACACTGTAGTTGTATAGGATGAAAAGAAAGCCTTTCATGTTGGTGCATATTAACAAGAAAGCCTGCCTTCCGAGAGAGGCTTTTTGATTGAGGTTTCTCCTGATTTTAATACAGCCGATGCCAGTTGGTATACCCAGCTTTAGAAAAGCGGGGAAAAAATCTAATCTTTAAACTGAAGTTTCTTCTTTTATAAGAAGTAAAAGAGAAAGAGTGAAATCCTAGCAAGTGG------------------CACTGCCATGTCTTTAATTATCTCTTACTAGACAAAACTCCCTCGCACTTGGAG--AAGAC-AGTGTGACAGGAGAGCAC chr4 - 94230402 35500208 35500207 35500826 58729577 58729576 58730195 619 CCTTGCTGCTGGAGGCTGTTCTTGATCCCATTTCTAAACAGAAGCACTTCTGC-TCAGCACTGACTGGGGTAGCTGTGCAGAGGC-----------------TGCCTTTTTTTTTTTCCCTTTTGCCTGCTAATTGGCTGAGACCACCAGAATTTGGAGGACACAGATGTCACTGATAGTTTGCCTAGGGAGCACATTCATGCCCATCTGTTGCAGTCTAGAAGGCTGTTCATATATCCACAAGGCCTTCATTTAATTCTTGTCAGAAAGTAATGTAAATCCAGTTTACCTCAGAGGTCACAGCCAAGATTTATGCCAATGAGCCCCCTGCAATTTACACACACTGTAGTTGTATAGGATGAAAAGAAAGCCTTTCATGTTGGTGCATATTAACAAGAAAGCTTGCCTT--AGGAGAGGCTCTTTGATTGAGGTTCTTCCTTATTTTAATACAGCCAATGCCAGTTGGTATATGCAGCTTTACCAAA----AGAAAACATCTCATCTTTAAGCCA----------------GAGAAGTAAAATAAATAAATAAATCCCCTAGCAAATGAATTTTGTTGTTGTTTGGTCATCATCTTGTC--------TCTCTCATGTGGCAGAGCCTCCGCGTACTGGGAAGCAAGATAAATGCTCTAGGGAAGCAC ...:.......x....::x:..-........:..:.....x..:.........-.x:.:x:..:......--.:.....x.x...-----------------.x..:::::..:.::...:.x:x..:.:....................................................x.................................:..................................................................................:...x.:................................................................................................:......--::........:.............::....x..............:...............:x........xx...----:.....x....x........:.::----------------:..........x.:.x.:.xx:.xx:........:..:------------------..::::.x....--------.....:.:xx.:..:.:.::..x..:...x...:--....:-.:..:xx:...::..... 22M1I30M1D16M2I13M17D307M2D76M4D24M16D38M18I12M8D34M2I5M1I18M 499/595 83.9% 619/94230402 0.0% 72/595 12.1% 76843437 NA +9127 chr4 + 190214555 112346836 112346835 112347084 249 CACTTAAAGTAATTAAAATGTTTATTGTAATGGGAAGAGTCCACTGTGCTCATAAATAACGACCCCACTTCTCAGTTGACTAC-----------ACTGGGGCCTCCTGGGAGGAGATGTATTTGCTTCCTGTCAGGATTAATCTATAAATGCAATCACCACTTAGACCTCATCAGTTCTTTTCTTCCCCTTCATTGGTC-CTCTGGACTTATATTGTAGCTCGAATAAGGT-CAAATTAGGATACTTTTTCCCCAGGAAAAA chr4 - 94230402 35501533 35501532 35501791 58728612 58728611 58728870 259 CACTTAAAATAATTAAAATGTTTATTTGAAAGTCAAAA--CAGCCTCAGTCATAAATAACTACCCTG-TCCTCAACTGATTGTGTTGAGTCCCAACTGAGCACTCTGGGAATAAGGTTGATTTGCTCCCTGTTGGGATTAATCCATAAATGTAGCCTCTGTGTGGAACTCATCAGGTCTTTGCTTCCTCTTCATTAGTCTCTCTGGAATTGGAGGGTAGCCTGAGCAAGATGGAAATTAGGATAATATATTTTCGGAGAGAA ........:.................xx..x.xx..:.--.x:.:x::x...........x....::-.:....::...:.::-----------....:.xx...:x..:.x:..:.xx.......:.....::.........:.......:.::.x.:::x.:..x........x.....x.....:.......:...-.......x..:x.xx.....::..::...:.-x...........x.x.x.:::.:.::.:.. 38M2D27M1D15M11I105M1I31M1I30M 173/246 70.3% 259/94230402 0.0% 16/246 6.5% 76845303 NA +3417 chr4 + 190214555 112352882 112352881 112353019 138 TCCTTCCTTCCTTTCTTTCTCTTTCTTTCTTCCTTTCTTTCTCTCTCTTTCTGTCTTCTCTCTTTTTCTTCTTCCTTTCCTTTCCTTTCCTTTTTTTTTTTTTTTTTGA--------------GATAGGGTCTCATT---CTGTCACCCAGGCTG chr4 - 94230402 9693713 9693712 9693867 84536536 84536535 84536690 155 TCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTTGACAAGGCCTCATTCAGCTGGCACTCATACTG ...:.:..x::.x..........xxx.x....xx:.x:.xx.:.:x..x:x..x.....::..:.::...:::.:...:::...x:.....x.....x..x......xx--------------..:.:..:......---...x...:..x:... 109M14I14M3I15M 88/138 63.8% 155/94230402 0.0% 17/138 12.3% 102659169 87555386 +17649 chr4 + 190214555 112377769 112377768 112378217 449 GTAATCATCATGAATAATCAAAAAGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGCGCCAGATGTGTC---GGAAGAGGACAAGAGCGAGGACCAGCGCTGCAGAGGTGAGGTTCTGATGGGAGGCACCAGGGGTGAACCAGCAGGTTCACTCTCCTGTCCCCTGCCTGAACGACACGTTCTTATCTCTGCCCTATTTTTCTTCTCTTGGCAGATGACCACCGAGAGATGAGTGGATTTCTAGGGCATGAATGGGACATGGGCTGCGGGCGGACGGGCAGGGGAGGAAGCCCACTTTGTTGCACTGAATTGCTGTCAGTTCTAATTTTAGGCTTCAGTAAACATGAGGCTACAAGAAACAGTTTAGTTCAAGAAGAACAAAGGATCCAAGTTGGCTGGTGCACGTAAATTTCAATTATTAAAAAA chr4 - 94230402 35505195 35505194 35505605 58724798 58724797 58725208 411 GCAGTGGCCATGAACACCTGCGGCTCGGTGGCTGCACTGCTGCAGGACTGCGAGCGCTCGCTGGCTGCGCTGCTGTCAGCCAAGGCGGACATCCACGAGGAAGAGGAGCAGGAGGAATACCGGCGGCACCAAGGTGAGGCCCCA----GGGGCAGCAGGG-----CAGGCAG---------CCGCTCCTCGGCC--------------------CTGCCCTATTTTTCTGCTTCTGGCAGATGAGAGCCAAGAGACGACTGGATTTCAGGGCAGTGAATGGGACATGGGCTGCGGGCAGGCAGG---GGAAAGCAGCCCACTTTGTTGCGGTGAATTGCTGTCAGTTCTAATTTTAGGCTTCAGTAAACATGAGGCTGTAAGGAACAGTTTAGTTGGGGAAGAACAATGCCCGAAAGTTTGCTGATGCACATAAATTTCAGTTATTaaaaaa .:.:.x::......:.x:::x::xx:...:....::..:.....:..x...:...:xx:.....x.xx...x:...::.xx:x.x.:..::.x:x---.........xx..::x..:x...:...x::.x:........::.::----.:....x.....-----.x:....---------..xx...:.x...--------------------...............x..::..........xx:..:.....:..x........x:..xx:.......................:.:.:..---..:.:.x...............:x..............................................::...:............x::.........x.xx:xx.....x....:.....:.........:........... 95M3I46M4D12M5D7M9D13M20D90M3D145M 300/408 73.5% 411/94230402 0.0% 44/408 10.8% 76872574 NA +11464 chr4 + 190214555 112382362 112382361 112382576 215 ACTGCAATTTCCTTACCTGAACTCTGACCTTTTCAGCTTTACTCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTT chr4 - 94230402 35509085 35509084 35509298 58721105 58721104 58721318 214 ACTGTCATATCTTTACCAGCACTTTGCCTTTTCCAGCATTGCTTCCCGATGACTTGAAGACCCTTCTGGAGGAGGCGAAGGAAATGAAGTGGCCCTTTGTGCCAGAGAAATGGCAGTACAAGCAAGATGTGGGCCCAGAGGACAAAACGAACCTGCAGGATACGATCGGCACCAGGCTCCCCGATCTACTGGTATGAAGCTCAGCA-CAGCTGTT ....:x..x..:.....x.x...:..x.:...:....x..:..:...:::..x..:.:......xx.xx.......:....................:.....x..:..:...........:....x:....................:......x.....::...:...:..:..:.x.xxx.x:........x....xx.x:..-..x..... 206M1D8M 163/214 76.2% 214/94230402 0.0% 1/214 0.5% 76873277 NA +43275 chr4 + 190214555 112386213 112386212 112387037 825 CTCCTCCCTGACTCTCCAATCCCTTTTCCTTTGGTGTGTGGCCACAGACAGAAATTTATGGCAGGGGCCAACCTCCTTTACACTCCACACAAAGCTTGCTGACTTGAGAGAGTTTGTCCGCGCTCTCCCAGAAAAAACACCTGCAGTACGCTCCCCAAGAAACCTGAAGAGATGGGAGATTAATGTGGCTGTAATAGCTGGGCAGTGTTTTTGGTATTATGCCCTCTCCCTAGGTAGATGGGTCTTTTCCGAGATGATACCAATTATTTATTGCTGAAACATCTGTTGATAACTGCAGCTGCCCTTGTAAAACAAAGCATATCACGGGGTCACAGGCTACGGCGACCTAAAATCCTACCTCATGCTAGTTTCAGTCTATTCAGCAACACCCTC--AAGTCCATGGGTTACCATCATCTTTAATGTCTCATCGTGCCATAGAAAATACTTTGTAAACACCGAGCTGCCCTGCCCTATAGGCTTTGAAGTATTATTTCATCTTCATCGGTAATTTATATTCCAGCACCATTGTACTGTGGGAAAAAGAGGGGGAACCTTTTTTGTTTTCCATTTAATTGTATATCGCCTGACACTTTGACCTGTATTATTAGTATTAGTCAGAAAAAGGA----TTTTCTCC------------------------CTCTCTTATTTAAAAATAAAATTTCAAGGGAAAGTAAGCGCTCCTTCAGCTCTTTTCACTCAAAAC-------------------------AATGTTTACACTCTGAGAGGGAAAGATGAAAAGCATGAGCAACTTTTTT------------------------CAAGTGTCGGAGAAGGGC-ATTTCAGTCTGTGAAAGAGAACAGTA-----AGGCCCTTATAAATATCA--TTCAGCAAAACCTT chr4 - 94230402 35509905 35509904 35510813 58719590 58719589 58720498 909 CTGCTCCCTGGGCATTTATTTTCTTTCTTTGGTGTGTGTGGCCTCCGACAGAAATTTATGGCGGAGGTTGACCTCCTTTACAATCCCTGCTCAGCACTCCGGCTTCGCAGTGTTTGTCTGCTCTCTCCCAGGACAAACACCTGCAGTAAGCTCCCGGAGAGACCTGGATAGATGGGAGATTAATGCGGCAGTAATAGAGGGGCAGTGTTCTCAGCATTATGCCCTCTCCCCAGGTAGATGGATCCTTTCTGAGATGATACCAATTATTTATTGCTGAAACATCTGTTGATAACTGCAGCTGCCCTTGTTAAACAAAGCATATCATGGGGTCATAGACCATAGGGACCTAAAATCCCACCGCATGCTCGTTTCAGACTATTCACCAACTCCCCCTGAAGTCCATTGGTGACCGTCGGCTTCAATGCTTCGTCGTGTGGTTGAAAATACTTTGTAAACATTGTGCTGCCTTTCCCCGTGTGCTTTGAAGTATTATTTCATCTTCGCTGGTAATTTATATTCCAGTGCTATTGTACCATGGGAAAA--AGGGAAAACCTTTTTTGTTTTCCATTTAATTGTAGAAAGACTGACATTTTGACCTGTATTATTAGTATTAGTCGGGAAAGGGGATTTTTTTCCCCTTCATTCATTCCCTGCCCCCCCTTCttttttttttttaaataaaatttCAAGGCAGAGCAAAGGCTGCTTCAGTTCTTTGAATAAAAAGCTGGGAGGGAAATGAGGCTGAAGAGAAGTGATTACAGTGCGATGAGGAAAGAT-AAAAGTCTGAGCAACttttttcttcttttttttttttttttttGGCACGAGGGACAGAAGGATAATGTAAGTCCCCAAAGGAAAAAAATATATATAAGTCTTTGTCAATGACATGTTCATCAAAACCTT ..x.......:x:x.::.x.::....:::.xxx..........x.x................:.:..:::............x...x::.xx...x:x.:.:...x:x..x.......:..x.........:.x..............x......x:...:.....:.x................:...x.......xx..........:.::.:...............:..........:..:....:..........................................................x...............:.......:..:.:.::.x............:...x......x.......x.......x....x...:.--........x...x...:..:x...:....::..:.....:x:.x..................::.x......:.x...::.:x........................:::.................::.:.......::........--....::............................x.xx.x......:..........................:.:...:..:----.....:..------------------------..:.:..x...xx................x.:..:..:x...x......:.....xx.:xx...:.-------------------------.:..x.....x.x:..x::........-.....:x..............------------------------..x.x.xx:x......::-..x.x....:x::..:..:..x.:..-----.:.:.:..:.x...:x..--....x......... 393M2I148M2D83M4I8M24I66M25I27M1D21M24I18M1I26M5I18M2I14M 651/822 79.2% 909/94230402 0.0% 90/822 10.9% 76876308 NA +16866 chr4 + 190214555 112402096 112402095 112402622 527 AATCACT-TTTCGTGTGTTTATTCTGCTAATTCCTCAT-------------CTCAGGACTTCCCCACCTCCCTTCCATATTTCCCTGCCTTTTACCAATCTCCCAATTTGTTATGCAGCAATAATTTCCCTTTACACTGCTCCTGCCAATTGCAGTGCCAGATGGCTTCAGTTCTGAGCCCCTTCACCCAGCCCCTCCTTGAGAACAGCTGCCATTGTCATTGCTGTGAACACATCACAGCTTTGAACCCATAGCTGGGACCTAAACTTGATGCTCAGCATCGGGAGGGGCTGGC--GCTAATGCAAGGAACCATGAAAACAGCACACACTTTTCCTTGCTGCTGTTTAGCAAGAGCCCTT-AGAAAAGGCTCTTCAGCATTTT-TTCAATCATCTGTGTATCGAAATCTCATTGTG-GAGTTTAATTCCTTTACCACCTGACTCAGCTTCCTAGCCATGAAGTTCCCTTTGTGCCTTAAACACAATTAGAACCCCGTTATTTCCCATCCTGAAAACAGATGTGAAAAAACAACTGCGTGTGTGTC chr4 - 94230402 35514494 35514493 35515010 58715393 58715392 58715909 517 AATCAATATTTCATTTATTTGGGCTTGTAATTCCTCTTACATCAGCTGCCACATAAGATCTCTGCAACTCCCTTCCCCTCCTCCCCACCCTC-------------ATTTACTATGCACCAATAATTTTCCTTTGACGCGATGCTGCCAGCTCCCGTGCCAGATGGCCCCGGTTCTGAGCT----------GCTCCCTCTCGGGAGTGGCT-CCATTGTCAATGCAGAGGAGGCATCGCGGCTTTGAACCCAACACTGGGACCCAAACTTCGGCCCCGGCGTGAGGAGGAGTTAACCTACTAATGCAGGAAACCATGCACACAGCACACCCTCCCACTCATCACCATTAAGGACAAGCCCTTCACTAAAGGCTGTTTTGCATTTTCCCCCACGGTCCATGTATAGAAATCTC---GTGCAAATTTAATTCTGTCACCACCTGATTCCACTTCCCAGGCGTGAGGTTCCCTTTGTGTCCTAAACTCAATTAGACATATG-CATTGGGCATCACGGACACAGATGTTAAAACA-AAGTGCACACGTACC .....x.-....:.x.:...:xx..xx.........x.-------------.x:.:..::..:x..x.........x:x::....::..:.:-------------....::......x.........:.....:xxx:.x.x......::.x.x............::.:.........:----------..:..::..:.:..:::...-.........x...x.x.:.x:....:.:............xx:........:......x:xx.:.:..:.x:.....:.:.::.--:........:.:.......x.x.........x..:::x..:::::.::..x..x.x:.......-.xx.......x..:x.......-::.x.:x:..::.....x........---...-:.:........:x.:.........:..x:.....:..x.:...:............:.:.....x........xx:x:.-:...xxx....x:.:.x........x....x.-..x...::::..::. 7M1I30M13I41M13D75M10D20M1D84M2I64M1I22M1I26M3D3M1I79M1D32M1D15M 347/498 69.7% 517/94230402 0.0% 48/498 9.6% 76887602 NA +43666 chr4 + 190214555 112403266 112403265 112404043 778 GCTGAGGAATTT---ACTATCCCCTTACTTGGCAGCAAATGAAAG---TGGGTATTAATTTCTCAGAGTGCTGGTAGAAACACGACAGAGCGGCTGCAAGAATGATACCCACCTAAATCTGTATGTAGTTCACAGCATGCTGCCG----TTTCAAAAGGGAAAGAGAAAAGAAAATGAAAAGAAAGAAAAGATTCTCC---TGAGTTGACTTCTCTGCATTTTGCATC-GTTAGGTCTTGGAGAGAGATGCGAGAGGTTTGGGCCCTGAACGG--AGTTAAATTATGCAGCTGCGGGGATGCCAGGTCCTCCAGAATAGGATGCTTCGTTTAGATTTTCCACAATGCTATTGAAGTGCTTATTTTCCTCCTGAAGAGACACAAACAGATGCAAACTTCTGTAAACACTTTAGAAATGAATTCAGTGAGTTTGGCCTCTCAGCAGTGCTCAATAGCTGACAGAAAAATGTCTAATTAGTGCAAGTGGAAATAATAGGGCCACTTGGATTCCTTCCATCCTCCTCCAAGTCTACTTTTCCAAGGAACTCAAAGGCCCTTTTGTCTGGCAGGTCACCCTCTCTCAGGCTTTTGTGCTCCAATCTATTAAGAGTAGAAGGGG------GAAAAATAGATTAGGCAGTGTTCTCTGCTCAAATATATGGCGTGTTCTTGAGGGATGCAGAATGGGGTGTTTGCAGCATCAGTTTACAGGTGCTTGGGGA--GGGATTCCTCCATTGGCGACAGCCAAAAGCAATTCGCACGTGTGTGCTTAGAAGGCCCCCTTTCAAGACCCAGCTT chr4 - 94230402 35515141 35515140 35515911 58714492 58714491 58715262 771 GCTGAGGAATTCCAGAGTGGTGCC--ATTTGGCAGTGGGTGAAAGGCGTGGGTATGGATTTCTGGGTGTGCTGCCGGGAACGTAATTGCAAAGCT-------TGACACCGAACCATGTCCCTGTGTGCCACACAGCGTGCGGCCCGGCCTTTCAAAA---------AAAAGTAGCTGA------------GTTTCTCCCCCTGGCTTGACTTTTCTACATTTTGTGTCCATTTGGTTTTGGAGAGGGACACAAGAGGTTTCGGCATTGAACGGGGAGTTAAATTATGCAGCTGCAAGACTGCCAAGCCCTTCAGAATAGGATGCTTCGTTTAGATTTTCCACAATGCTATTGAAGTGCTTATTTTCCTCCTGAAGAGACACAAACAGATGCAAACTTCTGTAAACACTTTAGAAATGAATTCAGTGAGTTTGGCCTCTCAGCAGTGCTCAATAGCTGACAGAAAAATGTCTAATTAGTGCAAGTGGAAATAATAGGGCCACTTGGATTCCTTCCATCCTCCTCCAAGTCTACTTTTCCTAGGGACTCAAAGGCCCTTTTGTTTGGTAGGTCACCCTCTCTCAGGCTTTTGTGCTCCAATCTATTAAAGGAAGAAGGGGAGGAAAAAAAAATAGATTAGGCGATGCTCTGTGCTTAAATATATGGCCTGTTCATGA-GCATTTCGAATGGATAGTTTGCAGTGTCAGTTTACAGGTGCTTAGAGAGGGGGATTCCTCCATTGTTGACCGGCACATGCGGGCTGTGCGTGGGGAGCTCCAGGAATCCTTTTCAAGTGCCATCTT ...........:---.x.:x:x..--.:.......::::......---.......x:......x:.x......x::.:...:::.:x.x:x:...-------...:...x.x.:.x:..:x.:...:x:x......:...x...x----........---------.....x.:x...------------.x......---..:x.......:...:.......::..-:..x...:........:..::.:........x...x:.......--...................::.:x.....:.:...:...................................................................................................................................................................................................................................x...:..................:...:........................................::.x........------:...............::..:...x....:...........x.....x...-.x..x:x......:xx........::.................:.:..--...............x:...x.x..x.x..::x::.::....x.x:x:.xx.:.:x:..:.......xx...x... 12M3I9M2D19M3I47M7D43M4I8M9D12M12D8M3I27M1I44M2I343M6I51M1D48M2I76M 621/747 83.1% 771/94230402 0.0% 55/747 7.4% 76888125 NA +29066 chr4 + 190214555 112411816 112411815 112412533 718 TGTTCCTC-CAGGCGTCCCTGAGGGCCTCCATCCTCGCTCGGGACTGTGCGGCTGCGGCGGCTATTGTGTTCTTGGTGGACCGGTTCCTGTATGGGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGGTAT--GCTCCCTCCTGCTGGCCGCCCCCGCGTCCTCAGTGTCTTCTGGTCCCCTTCCCTCCCGAGCTACTTGACCTCTGTGG-GACACCC-------------GGAGCACCCG-----GGCCCTGCGTGCCATCTTTCCGAGCCCGGGGCTCCCCTCCCCCGCCCCTGTGCCCTTCCACCCGCCTCTTTGCCAGCACAAAGGCCCTGGCATAAAGGGTTTCAGAGCCAAAAGCAGTAGAGAAAATTGTGAAAGGGTGTGGAAAATACTAATTGGAGCTTTTGTCTTCTAACAAATCTGTCCTGCTGCTTTCAAACAGGGGTATCTGAATTGCTATACTTCTGACCAAGAGTCTTTAAAAAGCAGATTAGAATTCTACTATTTTCTCTTCGCTCTCCTGTCTCCTTTCT---------------GTAGGACCACTTGACTAAGCTGACAATAGAGCTGACAAACCCACTGAAGTAATTTGAGGG---------TTTTTT-----TTCATCATTC--AGAACACCGGTACAGTACCTGATTAGGTCTTAAAGTATCTTTTT chr4 - 94230402 35517821 35517820 35518575 58711828 58711827 58712582 755 TGTTCTTTTCAGGTTTATTTGAAAGCTTCCATCATGGTCAAGGATTGTGTGACAGCAGCTGCTATTGTGTTCTTGATTGACCGGTTCCTGTACTGGATTGATGCCTCAAGCAAACTCCTGAAGATCGCCAAGGGCTTACACAAACTGCAGCCCACCACGCCGATCGGTCCTCAGGTGGTCATCCGCCAGGCTCGCCTTGCCGTCAATGCAGGTACCAGCTCCCA------GGCAGCCACTGC----TCCATTTTCTCAGCTCAGACCCAATTAGGAGCTACTTGACTTTGAAGAAGATACTTTGTCCCTTTCTGGGGATGACATGCTTATGATCCTG-GTACCATCTTTTCAAACACACAGCCCACTCCCAGCCCCCTTGGGCCCTCCCAGCT--CCTCTCACTAGCACAAAGGGC-TGGTATAAAGGGCTTCAGAGCCAAAAGCAGTAGAGAAAATTGTGAAAGGGTGTGGAAAATACTAATTGGAGCTTTTGTTCCTTAACAAATATTCCCCGCTGGTTTCAAACAGGGATATCTGAATTGCTATACTTCTGACCAAGGGCCTTTAAAAAGTAAATTAGAGTCCTGGCATTTTCTCTGCACTGTCCCAGCTGCTTTTTTTTTCTTTTTTTCCAGTGGGACCACTTGACTAAGCAAACAATGCAGCTTACACCCCCACTAACATAAATTGATTGATCTGTTTATTTTTTAAATGTCCTTCGTTCCTATAACACGGG--CAACACCTGAAGTGTTTTTTATGTATCATCTT .....:.:-....:x.x::...::..:......x.x.::x:...:....:.:.x..:..x...............:.x..............:x..x.:..:.:...x:.x.....:...x..:.......:..::.x.....::.......x:.......:..:.x:..x........:..:.....:..:..xx.:x....x..:x......:--......x------...x...x.:..----..x:.x.::..x.x..xxx::.xx.:xx............:.:x:x.:-..:..::-------------...xx..x:.-----.::....-..:........:.:.:.x.:x:..:.x.::..xx.x...:..x.....:...x.:--.:::.::.:..........x.-...:........:.................................................................::::........x.x:..:....x............:............................:.:..........:.:......:.:..:x:.........x.:..x...::x..x....:.---------------..:.................x:.....:x....x...xx......:.x:...x....xx.---------......-----.:.x..:...--.x.....x..--..::......xxx.x.:..x.x.....x.:.. 8M1I206M2I7M6D12M4D48M1I7M13I10M5I7M1D55M2D21M1D203M15I60M9I6M5I10M2I10M2D32M 519/702 73.9% 755/94230402 0.0% 69/702 9.8% 76893995 NA +3047 chr4 + 190214555 112420806 112420805 112420866 61 AAATGCATGTATATACTCATACATACATAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGACT chr4 - 94230402 67652079 67652078 67652139 26578264 26578263 26578324 61 AATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATT ..x.x..::::..:.xx.........xx.:.:.:...:...................:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 44768727 NA +3027 chr4 + 190214555 112420810 112420809 112420856 47 GCATGTATATACTCATACATACATAGAGAGAAAGAGAGAGAGAGAGA chr4 - 94230402 33398827 33398826 33398873 60831530 60831529 60831576 47 GTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .::...:.....x....:.....:.......:.....x.....x... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 79021983 NA +6732 chr4 + 190214555 112425644 112425643 112425754 111 AATTTTCATCTTTTCTTTTAGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGTA chr4 - 94230402 35521049 35521048 35521158 58709245 58709244 58709354 110 AATTTTCACCTCTT-TCTCAGGTACCTGGCAATATGCTAAGGAAAGTGATAGGATCCTTGTTCAGTCGGTCTGCTTACAAATCAGAGGACAGATTCTGCAAAAGCTAGGTA ........:..:..-.:.:...........x:..::xx..x........:.:.:....x..x...........:x....:........:.................:.... 14M1D96M 89/110 80.9% 110/94230402 0.0% 1/110 0.9% 76904595 NA +6485 chr4 + 190214555 112426452 112426451 112426545 94 TCTTTTTTTTTTCAGGGATGTGGTACGAAGCAGCAGAGTTAATATGGGCCTCCATTGTAGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGT chr4 - 94230402 35521919 35521918 35522012 58708391 58708390 58708484 94 TCTGTTTTATTCCAGGGATGTGGTATGAGGCAGCAGAGTTAATTTGGGCTTCAGTTGTGGGATATTTCAAACTTCCTCAACCAGATAAAAAGGT ...x....x..:.............:..:..............x.....:..x:....:........x:x.........:..:........... 94M 79/94 84.0% 94/94230402 0.0% 0/94 0.0% 76904533 NA +6029 chr4 + 190214555 112429146 112429145 112429257 112 CAGAGCCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGCTCTTCGTGCTCACAGCTGTGGTAA chr4 - 94230402 35523643 35523642 35523754 58706649 58706648 58706760 112 CAGACCCTTCTTCAGGAGTCCAGCCATCGTTTGCTATCAGCTGCTGAAGCCTGCAAATTAGCAGCAGTCTACAGCCAGTATACCCCACTGTTTGTGCTCACAGCTGTGGTGA ....x...x..xx......::::...:.:......:..x.....x...........::.:.....x.:..x...:xxx.....x..:..x..:.................:. 112M 84/112 75.0% 112/94230402 0.0% 0/112 0.0% 76905503 NA +3029 chr4 + 190214555 112429852 112429851 112429895 44 AAAGAAAAGAAAAGAGAAAAAGAAAAAGAAAAAAAAAAGAAAGA chr4 - 94230402 23164520 23164519 23164563 71065840 71065839 71065883 44 AGAGAAATTAAAAGAGAAAAGGAAGGAAAAAAAAAAAAGAAAGA .:.....xx...........:...::.:................ 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 89265332 NA +32261 chr4 + 190214555 112430403 112430402 112432624 2222 AGTTTTCAATTCAATATCTGATTTGGTATTTGGTATTTTTCCCAGAATATCCGTGGCACGTGTTTATTGTCCTACAGTAGTTCAAATGACTGTCCTCCAGAATTGAAAAACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGGGGAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACAATTTCAGCACTTC--CTCCAGAAG-TCAGGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTTACAAGTTCAAAGCTTCTCAAATGTAGATGACAGATCTTATGTTCCCGAGAGTTTCGAGTGCAGGTTGGATAAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAAATCCTTGACACCTATTCACAGCACCATACTTCGGTGTGTGAAGTATTTGAAAGTGATTGTGGAAACAACAAAAATGAACAGAAAGATGCAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAGAAATAAAAAACATAGATACTGTGAGTACTACTCAAGAAAAGCCACATTGTCAAAGAGACACAGGAA-----TATCTTCCTCCCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGAGAAACTGGACCCATTCTGATGCATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAA----TGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAGCCAGACTTCC---------AGTGCTTGGAGCAACTTATCAGGGTTTAGTTCCTCTGCAAGCTGGGAGGAAGTGAATTATCACGTTGACGACAGGTCAGCC-----AGAAAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGGAGCTAGAGAATGACAGGGAAGGCAGAGCT------ATGCATTCATTG-CATTCACAGCTTCATGATCTCTCTCTTCAGGAACCCAACAATGACAATTTGGAG----------CCTTCTCAAAATCAGCCACAGCAACAGATGCCCTTGACACCCTTCTCGCCTCATAATACCCCAGGCA-----TTTTCTTGGCCCCTGGTGCAGGGCTTCTAGAAGGAG------CTCCAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCAG-------AAATACTTCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCC-CAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAA---GAAGCCTTTGAAATAATTGTTGAGTTTCC---AGAAACCAACTGCGATGTCAAAGACAG-GCAGGGGAAAGAGCAGGGAGAAGAAATTAGTGAAAGAGGCG--CAGGCCCTACATTTAAAGCTAGTCCCTCCTGGGTTGACCCAGAAGGAGAAACAGCAGAAAGCACTGAAGATGCACCCTTAGACTTTCACAGGG--------------------TCCTGCACAATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCTCCTTCACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTG--CTCGACAGCATGGATGTTCCCTGCACAAATGG-GCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCA-ATTCCTCTGTAAGCGGTAACATCCTCTTCCCTGTCCTCAGCGAG-------GACTGCACTACCACAGAGGAAGGAAATCAGCCTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC-CTCAGTGTGGTG----GCTGAAATCACCTGCATTTTCCAGTGGTTCTTCTGAGGGGGACAGCCCTTGGTCC-TATCTGAATTCCAGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATGAGGAAAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGCAGGAGTGAGGCATGATTGGCTGTTTCAGAGACTAGAGAATACGGGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACATAGTAAGT------------ACAATCTTTT-----CAATAGTTCCCCCCTCAGGAAGCAGCT chr4 - 94230402 35524139 35524138 35526319 58704084 58704083 58706264 2181 AGTTTTAAATTC-----CTGGATTCCTCTTTTCT-TCCCTCCCAGAACATCCGTGGAGTGTGTTTGCTGTCATATAGTCACTCCAAAGACTGTCCCCCAGAAAGGAGGAAGTTCTACTTGTCTGAAGCCAAGGAATCCTTTGAGATCGGCCTCCTCACCAAGAACGATAACAGTCGTGTCACCAGCAAGCAGGAGCTCCATAGTTTTATTAAAGCTGCTTTCTGCCTCACAACTGTGCATCAATGGTTCTATGGGGAGAGTGAGAAACTCCATGAGGTTTATCAACTTTGTAGAGAAGCCATAGAAAAACTGCATACTTACAGCACTTCATTTACAGAAGAGGAAGAGAAAGGAGTGCTTGCGGAAGAGATCATGTCTCTGATTACATCTGTTAAGAAGCTCCTACAAGTGGAAAGCTTTCCTAATTCTGATGCCAGGTCTTATGTGCCAGACAGTTATAAAGGGGCAGTGGAAAAACCTGTCCTGCAAGGGGAAGCCAACTTTGAGAAAATCCTTGCCATGAATTCTCAGCATCATCTGTCAGTGTGTGAAGTGTTTAAAAATCCTTGCAGAATTAATAAAAACACACTGGGAGAAACCCCCATGGGGGTTTGTATCACAGCTTTAAAAACAGAAACCAAAAATACAGACACCATGTGTACCACTGAAGACATAGTATACCAGAGGAAGGGTGCTGGAAAAATGTTTAGTACACCAAAAGTGGGAAGTA-GATCAGA-GAAGCTCAGTAGCCAAACAAGAAACAAACAGAGCAGTTCTGATGTGAGTAATATTTC------------TATTGAAAAAGGGACCGAATCATTAGAA-AGAGTAATAATTGATGAAAACAATGTTTTCAACAGACGGCAAAACAGAAGTCAAACCACTTCTTCAGAGAATGCCTGGTGCAAGCTGTCACTGTCAAGTTGCTCTTCCAGCTGGGAGGAACTGAACTGTAATAGCAGCAAAGAGTTACCCGATGGAGGACAGCAACAAGAAAAGGGC--TCAGTGGAGGAGCAGTGCTGCACAAC---------------AGAAACAGATGAAAATGGTCAAGCTGCTTCCATGCACTCATTGTCACCCAGAAC-TCAGTATACTTCTCCTCGAGAGCTTTCATATAGTTGTTTGAGGTCACCTCAGCCTTTCTTAGAGGTAGACACAGCCCTAGCT-----------------------AGAAGGCTCGGGGAGAAGGCTTCTCTAAG----GGGAGCAAAGCTGAGAGAGGGAGACAACCCTTCAGGAG-------GGAAAGCAGAGACGAATAACACAGCTCTAGAGAACAACTCGG-TTACTT----CCCTCA-------CCGCTCCT---TCTTCCTATCCTGCCAGGATGGAGGAGGAGGAGTGTTCTTCCTCC--TCCTGGGCGGAGCTGGAGCCCTGG--GTGATGGCCGACCGACCGATGGGCGCATGCTGCAGCACCACGGACAGCGC-----------CAGGGCGGGCCACCTCGTCTCCGGGACGGCCTCGCCCCCGCCCCAAAAC-AGCTGTGTGGGGCGGGACCCGGGGGAAGGAACCCTAGACAGCACGGA----GCACCCCTCGCCCGTCGTAAGACGTCCCACGAATAGCGCTGCTGCTGCAGGA-TCTACAGGCATCGAGCCAAAACCGGCCAGCAGCTCCTTCGTGAGTGAGCGGC---TGAGGAAACCTGCAGCCACGGTCGGACACAGATCTCTCGAAGTACTTGATGTTGACCCCCAGGCAGAAACTGTAGATGA--------CACTGAATTTGATTTCATCAGTA----CTGGAGAGTTGGCAAACAGTTCTCCCAGAGTGACCACTCCAGAGCTTCAGGTGGCTCCCGGTGC----ACCAACAGGTTTGCCTTTGTGTGGAAACA----------CGTCCATAATAAAACACTTTGACTGTGCCACTACTGAAGAAGAGGAAGAGCCTCAGAGCA-GCAAA-----AGACAG---TTCAGTTCATCACTGAGTCCATTGCACAGTTCAGCTCATATGC-----CCAGCAGTTCCTCTGA-------------CGGTCCATTTCTAAGCCCAAGGGGAAGTGGTCTTGTCTTCACACCTAGGAGAACCAAGGAAGAAATCCTTGATGCTCGGATTCTGAGGGATGATGACTATGTGCAGCTTCTGGCAGGAGTAGAACATAACTGGCTTGTCCAGAGACTGATGCCTACTGGAATGTTTAAGTCTAAACAGCTTCATAAAGCATACTGTAAGTTTCCTCACAGCAACAGGCATTTTCAAGCAATGCTACTTCCCT-AGAAAACAGCT ......x.....-----...:x..xx.x...xx.-.:::........:........x::......::....x..:...x::..x..x........:......xx..::..x..x:.::...x.........:..:x..........:................:x...:.:::x.x...:..::.x..:........:..:..:...:.:............x.:.....x..x.....:x:.x..:..:.........xx.:..x:x......x:.:xx:...:..:....::.....x..:.::..:...:.:.x..x.........--:.x......-xx.:..x.:..:..:x..xx.xx....::.:......x.....:.x:xx..x...:.:.x::.......xx.......::.x...x:x....x...:........x..x..x....x::.:x.x:x:x....x....:.:..:....x...x...xx:.:..:x.:..........x..:xx....x.....:...x:x..:...........:...:...:.xx...::...x:..:.....::x..x.::...x:.xxxx.::..:..:..:.....x...:............:x.....:.:...:..::..x....:...x....x.x:x:.:.:::xx::.::.:::.x....-----.x.xx.x.x..xx..xx..x...x.-.x.....-.:.:.....x..xx:.:x...:.:x..x::..x.x:........::xx.x:x:.:..------------.:.x..:.xx.:...:..::...::..x-.x..:..----..:...:::x:x...........:::xx.x:.:::.x..:..:..:x.:---------.:...:...x....x:.:...xx..:x....x....x.x............x....:.:.x.::x:::.:.x::..:.x..-----..:.x..x:x.x:.x....::.--:::.....x:xx.....:.x...x:.---------------...:.xx..:::::.x..:x:....------.....:......-..::..x.:.-...xx..x::....:..::..:.::xxxx..:::x:....::.----------.:....:.:.:x:..x......xx:..x.-----------------------.x..x:.:.x:..x:-----..:...x:.----x..x...::...xxx...:....------..:...:..-------....:x....:.::x:x:..x...-------:..:.x:..x.-.:...:----......-------.:...:..---.....:x..:...x:...x:-x.:..:x.x.:.:::x.x....:.--...x:::x.:.---.:....:.x.--:.:..x.::..x:xx..---:.:x:.xx:....:::::..x:.....-..-----------.....x.::xx.x:.x..xxxx.:.:..--.xx....:xxx:::...:.-..::x:x:xx..xxx.....:.::.:..:...xx:...x.....x..----......:.x.x.:x..::.:.:--------------------.x.....x:.-...x::..x.x.:xx:.x.x:.:.x.xx.:.........::xxx.:.x:...---.xx::..x....xxx...x::xx:.xx:::.x:.xx...x..x:.xx.:::.:.....:x.x..xxxx..x..:.....--------x....--:.:..:xx...x::.:----...x.x.:x...-:x..:.:....x:...x..xx..:..:::::.xx.x.x:x.x..xx:.x..----...xx..-:..:x:..x.:x.:..x....----------:....x:.:::.:-------.....::.:..:..x..:....:::.xx.....x::.:..-..x..-----..x...---.:...:.....-..x...x::x..----.:.x.:x...:x...-----....::....:.....-------------:.....-.x...:.:::.x..x..:...xx.:xx..:.:xx::..x:.:.::.:x.:.:....:........x.....x.:::..x::xx........x..x:x....x:..........::::...:.:.....xx.:........::x.xx...x..::.x......:.:.:x..:..:..:x:....:.:x......------------...:x.x...-----....:x.x.::....-..:..:..... 12M5D17M1D294M2I9M1I359M5I25M1D7M1D57M12D28M1D7M4I49M9I81M5I22M2D26M15D25M6I12M1I10M1D43M10I29M23D15M5I9M4D23M6I9M7D24M7I11M1D6M4D6M7D8M3D20M1I24M2D11M3I10M2D17M3I27M1I2M11D28M2I19M1D47M4D22M20I10M1D52M3D79M8D5M2I16M4D12M1I51M4D7M1I21M10D13M7I40M1D5M5D6M3D11M1I12M4I15M5D16M13D6M1I193M12I10M5I15M1D11M 1265/2056 61.5% 2181/94230402 0.0% 291/2056 14.2% 76906264 NA +8355 chr4 + 190214555 112435134 112435133 112435312 179 TTTTTTTTTCCCAGGTGCTCTTTTGTTAAAATATTCAAAAAAATCTGAACTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAGAAAAAAGGCAGACAAAGAAATGCTTTTTGGGTTCATCATCTTCATCAAGAAGAAATTCTGGGGAGGTATTACTTAA chr4 - 94230402 35527004 35527003 35527182 58703221 58703220 58703399 179 TTTTCTTTTTGTAGCTGCTCTTCTTTTGAAATACTCAAAGAAAACAGGCCTCTGGACAGGCCAGGAAACATCTGTATTCATTGGGGACAAACTGAACGTGGCAAAAGAAGGCAAACAGAGAAATGCATTTTGGATACACTTTCTGCACCAAGAAGAAAGCTTGGGAAGGTATTGATCAA ....:....:x:..x.......:.x..:.....:.....:...x.x.:x..x.....:.x.........xx:...x.x:x.x......x.x:...x:...:x:...:......:...:........x......:.x..::x...x..:..........x::....:.......:x.:.. 179M 128/179 71.5% 179/94230402 0.0% 0/179 0.0% 76908130 NA +3739 chr4 + 190214555 112436260 112436259 112436363 104 TCAATTAATCTTCACAAAACCCTCTGAGGGTAGATA-CTATTATTATTCTCACTTTACAGATGAGGGAACTGAGTCACAGAGATGTTAAGGAA-TTGCCTGAAATC chr4 - 94230402 10729157 10729156 10729262 83501141 83501140 83501246 106 TTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .::...x.x.:......x....::xx::.....:..-:..:...:.x:::..:.......:..:.::.......x....x.x.x......x..-.....:::.:.. 36M1I56M1I12M 70/104 67.3% 106/94230402 0.0% 2/104 1.9% 101707103 88507452 +11423 chr4 + 190214555 112438468 112438467 112438666 199 TTTTCTTTGTTCATAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGGTAAGA-TTATCCTGAACACA chr4 - 94230402 35528616 35528615 35528815 58701588 58701587 58701787 200 TTTTCTGCTTGTTTAGGTATGTTGGGAAAGAATATAAAGAAGAGAAGGGGCTTCTTCATCATTTCAGTGATGTGGAACGACAAATGACTGCCCAATACTACGTGACAGAATTCAACAAAAGGCTGTATGAGCAAAAGATCCCTACCCAAATCTTTTATATCCCATCTGCAGTACTTCTGGTAAGAGCTATCTTCAAAACA ......x:x.x:x..................x.....:..:x..........::xx..:..:....x.........:.....:.....:..x..::....:...........:.....:..:..x.....:.....x..:..:.....:..x..:..:........::..:....x.........-:....:.x..x... 185M1I14M 155/199 77.9% 200/94230402 0.0% 1/199 0.5% 76909852 NA +12363 chr4 + 190214555 112439642 112439641 112439900 259 GCCTTTACCATTATGCTGTAATGTTTCTCATTGCTATT----TTTCAGATTTTAGAGGACAAGACAATAAAGGGATGTATCAGTGTGGAGCCTTACATACTGGGAGAATTTGTAAAATTGTCAAATAACACGAAAGTGGTGAAAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTTTCTAATCATAGAGATGTTGTGGTCGATTTACAAGGTATGTGAAACTGGGAATTATTTTTATT chr4 - 94230402 35529647 35529646 35529909 58700494 58700493 58700756 263 GTTTTTACATCTCTGCTTGAGTGACTGTCATTGAAACTCTCTTTTCAGATTCTGGAAGACAGAACAATAAAAGGATGTGTGAGTGTGGAGCCCTACATCCTTGGGGAGTTTGTGAAGCTGTCTAATAACACAAAGGTAGTAAAGAATGAGTACAAAGCCACAGAATATGGTCTGGCCTACAGCCATTTCTCCTATGAGTACTCCAATGGAACGGAAGTTGTTGTTGACCTGCAAGGTTTGTATTGCAGCGAGCTTCATTTATT .::.....xx:.x....xx.:..x:.x......xx.:.----.........:.:..:....::........:......:.x...........:.....x..x..:..:.....:..::....x........:..:..:..:..:.xx..:....................::.......::.......:..:.......x:..:...x:x.x:..x.....x..:..::.:......x...:xx:.x.x..::.x:x...... 38M4I221M 187/259 72.2% 263/94230402 0.0% 4/259 1.5% 76909995 NA +3252 chr4 + 190214555 112440802 112440801 112440867 66 TATCTCTTTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATTTTT-GTAAACACTTGAT chr4 - 94230402 70212917 70212916 70212983 24017420 24017419 24017486 67 TACTCCTCTAAGTGTGTAGGGGTGTGTGTGTGTGTATATGTTTATTTATTTTCAATGATCACTTTAT ..:::..:.........:x.x..............:.:...x...x......:-:.:.x.....x.. 53M1I13M 50/66 75.8% 67/94230402 0.0% 1/66 1.5% 42227885 NA +12024 chr4 + 190214555 112440884 112440883 112441102 219 TTTAATACTCAGGTGTGTTCATTTCTCTTTTAGGTTGGGTAACCGGTAATGGAAAAGGACTCATCTACCTCACAGATCCCCAGATTCACTCCGTTGATCAGAAAG---TTTTCACTACCAATTTTGGAAAGAGAGGAATTTTTTACTTCTTTAATAACCAGCATGTGGAATGTAATGAAATCTGCCATCGTCTTTCTTTGACTAGACCTTCAATGGAGAAAC chr4 - 94230402 35530462 35530461 35530681 58699722 58699721 58699941 220 TTCAGTACCAAAATGTATCC--TTCCTTTGCAGGCTGGGTGACAGGTAATGGAAAAGGTCTCATCTACCTCACAGACCCACAGATTCATTCTCTTAATAGCAAAGATGTTTCCCGCTCTAACTTTGGGAAGAGAGGAATTTATTATTTCTTCAACAATCAACATGTGGAATGCAATGAAATCTGCCGTTGCCTTTCTTTAACAAGACCCTCAGTAGAGGCAC ..:.:...:x.::...:.:.--...::..x:...:.....:..x..............x.................:..x........:..:x..:..x:x....---...:.xx:x.:..:.....:.............x...:.....:..:..:..:...........:.............:.:.:........:..x.....:...:.:...:x.. 20M2D83M3I114M 167/217 77.0% 220/94230402 0.0% 5/217 2.3% 76910422 NA +3011 chr4 + 190214555 112442711 112442710 112442770 60 AAAGCTTTTTTTTTTTAAAAAAAAGAATAGTCTTGCAAAAAAAAAAAAGAAGAAGAAGAA chr4 - 94230402 37911836 37911835 37911895 56318508 56318507 56318567 60 AAAGCTGTTTGTGTTTAAAACAAGAAATGTCATGGTAAAAAAAAAAAAAAAGAAGCAAAA ......x...x.x.......x..::...:x:x.x.:............:......x.:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 74530875 NA +34874 chr4 + 190214555 112448026 112448025 112448618 593 TTAAGGAGACAATC----TTTGTTTCTTCAGATATCAGAAATGTC-AGGCTTTTGTTACTGTCTTTTAGCAGTGCTATTATTTTGAAGATGATATTTGTTCTGTGTGGTTTTAATATACAGATGTCCTCTGCCTGAACAGTTCAGTAGAAACTAGGTATAAAGTACAAGAAGCAAGCAAGAGAGGGTAAGAGAAAAAAAAATAAATCTCTTTATTATGGTGCATAAACCTTCAGTGTGAGGGAGCTTTGCAGCTGCACAAGGAGAAAAATGCATTCAAAAATATAATGCAAGTGTGAATAATCCTTTCTCGAATGCTGCTTGCAGACTGCTCCAGCTTTGTCAGGTGAACTTGAACCGGGCCATCAGATTTGCCCCCATTCCCATTGCACACTCTGTCTATCACCCCAGGGCATTCACCATCTTGACTGTTGTTTAAAGAGAAC-AAGCAATCCATCATTGAGCCAGGGAGTCACTTTCTCATAGAAAAGTAAAATCAGCATGTGACACT--ACTCAGCCCTAGTGTTTTGCAGATTAAAATGATACATGGCGACTCACGTGTTACTAGGAGGATTAAGTTGGTTATCTTGTTCCATTGCC chr4 - 94230402 35532579 35532578 35533161 58697242 58697241 58697824 583 TTAACAAAACCATCAGCTTTTGTTTCTGCAACCGGCAGAGATTTTTAGGCTTTTGTTGTCGCTTTATAGCAATGCCATTGTTTTCGAGGGGATGTTTGCGCCGAGTTGTTTGGA----AAGATGCCCTATCACCAGGCTGAACAATTAGAGCTAGGTGTAAAGAGGGAGAAGCAAG------------AGAAAAAAAAAATTAAATCTCTTTATTATGGTGCATAAACCTTCAGTGCTGGGGAGCTGGGCAGCTGCATGGGAAGAAAAATGCATTCAAAAATATAATGCTAGTGTGAATAATCCTTTCTCGAATGCTGCTTGCAGACTGCTCCAGCTTTGTCAGGTGAACTTGAACTGGGCCATCAGATTTGCTGCCGTTCCCATTGCACA--CTGTCTATCACCCCGGGGCATTCACCATCTTGACTGCTGTTAAAAGGGAGCAAAACAATCCATCATTGAGCCTGGGAGTCACTCGCTCATAGAAAACTAAAATCGGCATGTGACGGTACACTCAGCCCCAGTGTCTCGCAGATTAAAGTGATACATGGAAGTTCACGTGTTACCGGGAAGATTAAGCCAGTTATCTTGTTCCGCAGCC ....x:.:..x...----.........x..:x::x....:..x.:-...........:::.::..x.....:...:...:....x:..:x...:....:x.:.x..x....x:.----x.....:...x.xx.::::.x.xx..:.x::.:......:.....x:x:.........------------...:........x...................................:x:.......xx.........:::.:...........................x..................................................................:................:x..:.............--..............:.....................:....x....:..:.-..:.................x..........:x...........x.......:.........:x.--.........:.....:.:..........:..........x:::...........::...:.......:::.............::x... 14M4I27M1I68M4D58M12D203M2D51M1I65M2I89M 473/575 82.3% 583/94230402 0.0% 26/575 4.5% 76915447 NA +3466 chr4 + 190214555 112464958 112464957 112465036 79 AACCATGTGTATATATATATATATACACACACACATATATATGTACACATATATATACACACACACATATATATGTACA chr4 - 94230402 37363035 37363034 37363112 56867291 56867290 56867368 78 AACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA ...xx......:...:x.:........::....x......xx..::.:..:.:...::.:x......:.-.......:. 69M1D9M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 75101923 NA +3104 chr4 + 190214555 112464970 112464969 112465031 62 ATATATATATATACACACACACATATATATGTACACATATATATACACACACACATATATAT chr4 - 94230402 17520749 17520748 17520810 76709593 76709592 76709654 62 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .:.x.......x.....x.:...:...:....:x.:::x.:....x.....::......... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 94944221 NA +4272 chr4 + 190214555 112464979 112464978 112465101 123 TATACACACACA-------------CATATATATGTACACATATATATACACACACACATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACACACACACATATAA chr4 - 94230402 73121075 73121074 73121210 21109193 21109192 21109328 136 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAA .:.....x....-------------.:.:.::...:.:.:x:...:.:.:.:.....x.x::..:x.....:.::....x::....:x::....:.:x.....::..x....:.x....x.x.......::..... 12M13I111M 80/123 65.0% 136/94230402 0.0% 13/123 10.6% 39343904 NA +3383 chr4 + 190214555 112464991 112464990 112465059 69 CATATATATGTACACATATATATACACACACACATATATATGTACACATATATATACACACACACATAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ....:.x...:.:...x..:....:......:...:....::x...:...:x..::...:...:.x:.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 104868579 85345976 +3947 chr4 + 190214555 112464996 112464995 112465099 104 ATATGTACACATATATATACACACACACATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACACACACACATAT chr4 - 94230402 89016082 89016081 89016185 5214218 5214217 5214321 104 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCAT ..:..:......x.::..:.........:.x.::::::......::.x..:..:....::.x..:.:...:..x::.:x.:.:.......:x.::.:::.x:.. 104M 63/104 60.6% 104/94230402 0.0% 0/104 0.0% 23448914 NA +3224 chr4 + 190214555 112465002 112465001 112465063 62 ACACATATATATACACACACACATATATATGTACACATATATATACACACACACATATATAT chr4 - 94230402 17520749 17520748 17520810 76709593 76709592 76709654 62 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT ...x.......x.....x.:...:...:....:x.:::x.:....x.....::......... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 94944253 NA +3437 chr4 + 190214555 112465021 112465020 112465088 68 CACATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACA chr4 - 94230402 66904846 66904845 66904911 27325492 27325491 27325557 66 CATATATGTACGTACACAC--ACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ..:....:..:.......:--.:................x..x..x..x..:......xx..:..:.. 19M2D47M 52/66 78.8% 66/94230402 0.0% 2/66 3.0% 45560175 NA +3777 chr4 + 190214555 112465021 112465020 112465102 82 CACATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACACACACACATATAAA chr4 - 94230402 8395787 8395786 8395868 85834535 85834534 85834616 82 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAA ..::.:.:.....:::....x.:..::.:x:...:..:...::x....:xx...:...............x.....x..:.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 104069234 86145321 +3194 chr4 + 190214555 112465023 112465022 112465098 76 CATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACACACACACATA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:.:.::::::...x.:.:::.:x:......:....:x:..:.xx...................x...:. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 104069236 86145319 +3432 chr4 + 190214555 112465023 112465022 112465090 68 CATATATATGTACACATATATATACACACACACATATATATGTACACGTATATACACACACACACACA chr4 - 94230402 7596412 7596411 7596479 86633924 86633923 86633991 68 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ....:.x...:.:...x..:....:......:...:....::x...::..:x...:...:...:.x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 104868611 85345944 +3606 chr4 + 190214555 112499220 112499219 112499302 83 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCTTCAGCATTTTGAGTAGCTGGGATTACAGGCATGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:...........:.x...x.xx.x:.....x...::.........:.:....--.:........:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 94302094 NA +16535 chr4 + 190214555 112502993 112502992 112503325 333 CAGACCATCATGTTAATAAGAGCTGATTTGTAAATAGCGTCTCCCTCACTCCATCACAACCCCCCTTTGGCCAGGCTCCTACTTTCCTGCTCAATGGCACAGATGCGGCTTTGAGCTGAGGGGGAGCCAGGCAGCTATTAGCAGCAAATCCAGTGAGGGAAATTAATGAAGGGGACAACTAATAAAAGACAGCTCAGGACAGCCGGACTAACTTGCTCTTGCTCCGAGCAGTAATTAACTTTCTTTTTTTTTTTTTTTTTTTAGCTCATGAAGGTAAATATGTCATCGACACTGGTCCAGTCTAACTCTTCTTTATTAAAAAAGAGAGCAGAG chr4 - 94230402 35534633 35534632 35534935 58695468 58695467 58695770 303 CAGGCCATCACGTTAATAGGGGTTGATTTGCAAACGGCGTCGCTCCCCCT-------GGCCCCCCTCTG-CCCGACTCCCGCTTCTCCGCTCAATGGCACAGATGCTGCTTTGTGCTGCCCAGGA-CCAAGCGGCTATTAGCAGCAAATCCAGCGAGGGAAATTAATGAAGGCGACTACTAATAAAAGGCAGCTCAGGACAGCCGTACCAA------CTTGCTCCGAGCAGTAATTAAC---------------TTTTTTAAAACTCGCGAAGGTAAATATGCCATCGGCTTTGGTCCGGTCGCTCTCCCTTTTAATAGAAGCAGGGGGAGGG ...:......:.......:.:.:.......:...::.....x.:.:.x..-------::.......:..-..x.:....::...::.:..................x......x....xxx:...-...:..:....................:..................x...x...........:................x..:..------......................---------------......xx.:...::.............:.....:.x:......:...xxx...:::....x..:..:x::.:.x..:. 50M7D12M1D55M1D85M6D22M15D79M 242/303 79.9% 303/94230402 0.0% 30/303 9.9% 76968360 NA +10341 chr4 + 190214555 112510393 112510392 112510854 462 CCAATAGCAGACTTGGGGAGACCAAACCTCCGATTTCTGGCCACATCAAAGCACTGATTATGCAAAT--ACCCATTTTTTTT---------------------------AAGAATAAAAGAAAATGGAGGGGGAATTATTTATCACACAATGAACCCCCTGCCAGGGCAGGAAACAATAGATCAGACCAGATAGCCCTTCTAGCCCCAGGCTGGGGGAGCGAGAAAGGGGGGTATTGGAGCCCTCACGTTTTATTGGTCTAACCTAATTTCACTAATTCTCTTTTCACACATT-----------------TCTTTTGCAGATTCGG--------------AGGCCGGGACTTTCACGCTCCCGGGAGCGCACTGCATTGGCGCGATTCAAGAGCTGCCCGCTTTATTTAATTAATACATTCAAAGCTCGCTTGGGAGCCCGAGGGGGCTCGGGGAAGACCGAGGCTGGCGGTGAGGAGGAGGCGCTTTTAACCGGTTCCAGGTGTCGGTGCCCAGAAGTCAC chr4 - 94230402 35536330 35536329 35536727 58693676 58693675 58694073 398 CCCACAGCAGGTCTGGGGA---CACAGCTCCCTGCCCTGGCCACATCAAAGCACTGATTATGCAAATGTACCCACTTTTTTTCTCTCTCTCTCTCTTTTTTTTTCCTCCA---------------------GGAATTATTTATCACACAATAACTCCCCTGCCAGGGGGGGAAACAATAGCTGGGGCT-GATAGATGCGCTTGCCTGAGGCTACGGG-GCGGGAAGTG------------------CGTTTTATTGGGCTAACCTAATTTCACTAATTCTCTTTTCACACGTTGGGCTTTTTTTTCCCCCTTTTTTCCCCCTTCGGGGATGTTGCTCACAAGGCTGGG--TTTCACGCTCCCAGG------------------------------GCTCATGTTATTGAATTAACACGTTC-----------GGGCGCCTCCGCTGGTTC-------------------------------------CTAATGATTTCCAGGTGTTTGTGCCCAGAAGTCAC ..x.:.....:::......---..x.x....xxx::...............................--.....:.......---------------------------.---------------------....................:.x:............x:...........x.x:.:.:-.....x:x:x..x...:x.....:x...-...:...:x.------------------...........x................................:..-----------------.:....x.xxx.....--------------....:...--............:..------------------------------..:.::x.....x......:..:...-----------...x...:xx.xx..:..-------------------------------------:...:x:x..........:x............... 19M3D45M2I13M27I1M21D57M1D28M1D10M18D47M17I16M14I8M2D15M30D26M11D18M37D35M 272/338 80.5% 398/94230402 0.0% 184/338 54.4% 76974063 NA +27949 chr4 + 190214555 112513512 112513511 112513952 441 AAACTTATGAAAATTAGATAGTTTATTTATAGTTTAATCACAAGAACAACTTTCTTGTTCTTCAAGATGTAAATACATACTAGAATAAACTCTGTAGAATATACAAAAAA-TACATATTTTCCCATGAAAAATTTCTTTATAATAAATAGAAGGGAACACGTGTGTGGCTGATCCGGATAATGCTCCGTGTCTGCTTAGGTTTTCAGACTGTTGATTTATTTTTAATCTCTTGAAAGAATGGGGGAGTTCCTTCTCCCCTAAAAGGTCGAAATAAATAATACATGAGGCAATCCTCCCTCCTG---ATTTTTCCCTTTTCCTCCACA-TTTTTCCTTTTGATAGAGAGTTCAGCCTAAATTTCCACGCTTGCATTCAATCATTACAAAGCCTACAAATTATACAATGACTTCTAACCTGCCCCTCTAACAAAACAAGTTTTTTTCC chr4 - 94230402 35537584 35537583 35538025 58692378 58692377 58692819 442 AAAATTATGAAAATTAGATATTTTATTTATACTTTA-TGAGGAGAACAATCCCTTTGCTCTTCA-GCCGTAAATACATACTAGAATAGACTCTGTAAATTATACAAAAAAATACATCTTTTCC-ATGAAATCTTTCTTTATAATAAATAAATGTGAACACGTGTGTGGCGGATCGCTGTAATGTCCCGTGTCTGTTTGGGTTTTCAGTCCGTTGATTTATTTTTAATCTCCTGAAAGAAGGGGGGAGTTCCTCGTCCCCT-AAAGGTCGAAATAAATAATGCATGAGGCGCTCCTCCCTCCCACCCACCCCTTCCCTTCCCTCTACAGTTTTTCCTTTTGATAGAGAGTTCAGCCTAAATTTCCACGCTTGCATTCAGCCCTGACAAAGCCTACAAATTATACAATGACTTCTAACCTGGACCCCTAACAACACAACTTTTTCTTC ...x................x..........x....-.x.x:.......:::::...:......-.x:...................:........:.x...........-.....x......-......xx.................:.x.x...............x....xxx:.....::.........:..:.........x.:....................:........x............:x......-...................:........:x..........::---.::::.:..:..:....:...-.................................................::.x.x....................................xx..:.......x....x.....:.:. 36M1D27M1D45M1I12M1D136M1D42M3I21M1I118M 375/437 85.8% 442/94230402 0.0% 9/437 2.1% 76975928 NA +4529 chr4 + 190214555 112514768 112514767 112515128 361 GCAGCTGTAGGGGGAGGTGGAAT--TGGAGGACACGGAGGAGGACGGCGCGGGGCTGTTGGTGCAACTCCACGTGGAGGCGGGCGAGGGGCTGTCTCCGCTGCTGCTCAGGGCGGCGCTGGCTCCTCCCGGGCTCAGC--AACACTGCCTCGGAGAAGAGCGCCCCCGGCAGGCCCCCGCCGCCGCCCCCGCAGTGATCCGCCAGGCGCAGGGTCTCGGTGAGTGCCCAGATGTAGTTGTGGGCGAAGCGCAGGGTCTCGATCTTGGTGAGCTTGGCGTCCTCGGGGAACGTGGGGAGCACCTCGCGCAGCGCGTCCAGTGCCGCGTTGAGGTTGTGCATGCGGTTTCGCTCGCGGTTGTTGGCC chr4 - 94230402 56010407 56010406 56010706 38219697 38219696 38219996 300 gccgccgccggggggAAGCGAGTCCTggcgggcgcggggggcga-ggcgcggggc----------------------ggcggaggagggggcg------------------gcgggggaggCTCGAAGGGGGCCCCGCGGAGCTCGGCCTTggcgg---gcggctcgggggg-----cgcgggcggccc----------------gTGCAGCAGCTCGGCGAGGGCGCTGATGTAGATTTGCGCCATCTGCAGCGTCTCGTACTTGGAGAGCTTCTTGTCGTTGTTGAAGGAGGGGATGACATTACGCAGCTGGTCGAAGGCGTGATTCAGCACGTGCATCCGCCGCTGCTTTTGCGCGTTGGCC ..x..:.:x.....:::xx..:.--...x..:.:...:..:x..-..........----------------------.....:x......x:.------------------....x.xx.....xxxxx....:.x..--.:.x.x....:..x.:---...x.:.x..x:.-----...x.x..x...----------------.:....x:x.....:...x..x.x.......x.x..x..x.xx:....x......xx.....x......xx:...x.:.xx...x.x.....xx..x.::......xx...x.:x..xxx:..x..xx:......x..x:x::...:x:.xx:....... 23M2I19M1D10M22D16M18D27M2I16M3D13M5D12M16D160M 194/296 65.5% 300/94230402 0.0% 69/296 23.3% 56504361 NA +14716 chr4 + 190214555 112520059 112520058 112520444 386 GCATGAACTGTCCTAAGGGGTCAAACTGTTCATCTTCAGCCCTTCTTTCAGTGCGGAATCCTACTTTAAGAGAACAAAAGCTCAAAGCAGACAGTTTTCAAGAAATGGGAGCACAATGATTTAAACTCATCCCCAAGCCTCAGAAAGAAAGGGAGCTGAGTGCGTGTAGTGAGAGACAAGTGGAGTAAGGGGAGGGGTGAGAGGGTGGGGATCTTTAGAAAGTCTTTGTTGCTTCTAAGAAGCTTGAACTTTGAGACGACCCAAAAGCCCT-AAAGTTTAGGGTAGGTGTTGCTGTGGAGCCATAGGCTACATTCCCTCCACACTTCGACCTCACAAGTTGCGAAAGAGGACAAATGGTCGCCGCGCTAGTCCCTTGCTGTTGCAGG chr4 - 94230402 35538786 35538785 35539133 58691270 58691269 58691617 348 GCCTGAACTGTCCCCCGGGGTCAAACTGTTCAACTTCAGCCCCTTTGCCAG-ACTCAATCCTACTTTATGGGAACAAAGGGGTGAAGTAGGCGACGATCAAGAAATGGGAGCACAATGATTTAAGCTTATCACACGGCC-CAGAAATAAAGGATGCTGAGCTGGTGT---------------------------GCGGGAGAGGG-GGAGACCTTCAGAAGGGCTTTGTTTGCTGTAAGAAGATTGAACTCGGTGGCGACCCGAGAGCCCTAAAAGTTTAGGGCCTGTGTTGCTGAGAGACCTTTGGACGCAGCCCGTCCACGCTCCGACCTCACAAGTTGCGACCGAGTGC---------CTGTGCCGGCCCCGTGGCCCAGCAGG ..x..........:xx................x.........:.:.x:...-:.xx............x.:.......:.xx::...:..:.:::xx...........................:..:...x.xx:...-......x.....:x......:xx....---------------------------.x.x.......-..:..:...:....:.x.......xx:.x.......x.......:x.x.:......:.:......-...........:xx.........x.:::..x.x..x::..x:..x.....:..:..................xx...x:.---------.:.:..::.:...x..x:x:x..... 51M1D87M1D27M27D11M1D65M1I80M9D26M 259/347 74.6% 348/94230402 0.0% 40/347 11.5% 76981273 NA +48203 chr4 + 190214555 112521398 112521397 112522155 758 CTCTTCTTTCCCACGAAGGAAAGAAATTACCGTAGGAGATTTTGCCAATCCATGCCAGCTTTCTGATTGTTTTCTTCAGGTAAGGGGAAAAGAACAGCC-AGCGCGTGAATGGAGAGCTGAGGGCCCACTAGGGAGAGAACCTCTTCCCCACCCTTCGGTGCCTGCAAAAAGGGACATTGGCTATCCAGGGGAAAGTGCAAGAAAGAGAGCACTAATCGCTGAACCAGGAGACAAACACGATTACCAGCTCCGAGCCTTGAGTCAGAAAGTCTCATAGACTTTAAGATGTTAATCCCCAGCATAATCCTTCCTTTGGCGTGTAGGAATAGTGCAGCCACAAGAGTTGTTTTGTTATTTATATTGGCGTTTAATAAAACTCAGCCAGTGGTGAATGGGCTGCCCACTCTCCAATGGTAATTAATTCCCTATTTCAGTGACCCAATTGTCCTGGGACAGAGCGGTGGGCCCGTCCCAGTGCCCCGATCCCCCTTTGTGCGGATACACTGCCCTCGTGCTTCAACAGCTATGGAAACTCATTCTTTTGATGTCATTCAAGGAGTTTTCCTTGGGCATCTTCTAAACTTCAAGGACCCTTTTCTTTCTGCGTTTCATGAAAAGCAGTGCGAGCTTGACCACCTCTGTAGAATTTAATGATTTGGTGAAAGGGCCCTTT--GGGATTTGTGTAAGGAGTTAGACAGAGAGAAAGGAAATTTGGCAGCCTGCTCCCTCGCAGGGACCGTCCCTAACCTGGAAAACAC chr4 - 94230402 35539605 35539604 35540313 58690090 58690089 58690798 709 CCTTCCTTTCCCATGAAGAAGAGAAGAAGC--TTGAGGATCGCGTGAACACGCTTCAGTTTTCTTATTCTTTTCTATAGATGTGGGGAAAAGAACAGCCGATTGTGTGAA---------------------------AAACC--------------CAGTGCCTGCAAAAAGGGACATTGGCCATCCAGGCGAAGGTGCGCGAGGGAGAGCACTAATCGCTGAACCAGGAGACAAATACGATTACCAGCTCCGAGCCTTGAGTCAGAAAGTCTCATAGACTTTAAGATGTTAATCCCCGACATAATCCTTCCTTTGGCGTGTAGGAATAGTGCAGCCACAAGAGTTGTTTTGTTATTTATATTGGCGTTTAATAAAACTCAGCCAGCGGTGAATGGGCTGCCCACTCTCCAATGGTAATTAATTCCCTATTTCAGTGACCCAATTGTGCTGGGATAGAGCAGTGGGACAGTCCCACTGCCCCAACCCGCCTTTGTGCAGCTACACAGCTCTCGTGCTTCAACAGCTATGGAAACTCATTCTTTTGATGTCATTCAATGAGTTTTCCTTGGGCATCTTCTAAACTTCAAGGACCCTTTTCTTTCTCGAACGCATGAAAAGCAGGACTAGCTTGACCACCTCTGTAGAATTTAATGATTTGGTGAAAGGGCCTTTTTGGGGGTTTGTGTAAGGAA------AGAGAGAAAGAAAATTTGGCAGGCTGCTATCAAAT-GGGGCTGTCC--AACCCGCAGCACAC .::.:........:....:.:....:xx:.--.x.::...:x:.:x..:x.::x:...:.....x...x......x:..:.:x................-.x:.:.....---------------------------:....--------------.:........................:.......x...:....:x..::...............................:.............................................................::......................................................................................:............................................................x......:.....:.....x.x......x......:.:..x.........:.x.....x..:...............................................x...............................................xx:x:x............x:.x............................................:...--...:............:------..........:...........x.....x:.xx::-...:.:....--....:.x.:x.... 30M2D67M1I10M27D5M14D518M2I17M6D35M1D10M2D14M 618/706 87.5% 709/94230402 0.0% 55/706 7.8% 76981793 NA +37958 chr4 + 190214555 112523227 112523226 112523722 496 CCCTGCGCAAGTAGTTC-TTCTATGTCTTTACACGCACTTCCAAAAAAAC---TTCGCAAGTCACAGAAACAATTCAGAATTCAACTAAGAAAATACAGAGTGAACCATATGGCCTGGGTGGCTCGAGTCGGCTGCATTTTCCTCCAGACAAAGAAGGGATTGAGGGTTGAAGGAAAGGAGAAAAAAAACCAACTTTCCGGCTGATGAAGCTGTTGTCTGGAGGCAATGATCCCAAATCTGAAGGCTTTATTCC-GGCTCCGACGGAGACGTGATATGTCATATGATTAGCATCTTTCATATTTACAAGAGTGGTATGGGCTGCCAATCTTGAGAGAAAGGCGAGAGAAAGAAGGGGGCATATGCTGAAATGGATTTAGCATTTGAAAGAGAGAAAGGAGATCGGATAAATACACTTAAACGAGGATTTAGTTTTACTCCTGTTGAGTTCTAATAGATTGTTGATTGAGATTTTAGGGGCCTGGAACCGAGGTGTCAGCAG chr4 - 94230402 35540618 35540617 35541113 58689290 58689289 58689785 496 CCCAGCGCGGGCAGCCCCTTCTATGTCTTTATACATGCTCCCAAAAAAACCCCTCCGCAAGTCACA--AACAATTCAGAATTCA-CTAAGAAAACACAGAGTGAACCATATGGCCGGGGTGGCTCGAGTTGGCTGCATTTTCCCCCAGACAAAGAAGGGATTGAGAGTTGAAGGAAAGGAGAAAAAAA-CCAACTTTCCGGCTGATGAAGCTGTTGTCTGGAGGCAATGATCCCAAATCTCAAGGCTTTATTCCAGGCCCCGACTGAGACGTGATATGTCATATGATTAGCATCTTTCATATTTACAAGAGCAGTGTGGGCTGCCGGGCTTTAGAGAAAGGCGAGAGAAAGA-GGGGGCATATGCTGAAATGGATTTAGCATTTGAAAGAGAGAAAAGAGATCGGATAAATACACTTAAACGAGGATTTAGTTTTACTCCCGTTGCGTCCTAATGGATTGTTGATTGAGATTTTAGGGAGCGAGAGCCGAGGTGTCAGCGG ...x....::.:..::.-.............:..:::..:..........---.:...........--................-.........:....................x.............:.............:.....................:......................-...................................................x.............-...:.....x..............................................::..:.........::x...x....................-...........................................:...........................................:....x..:.....:.......................:x.x:..:.............:. 17M1I32M3I13M2D16M1D103M1D65M1I97M1D148M 453/491 92.3% 496/94230402 0.0% 10/491 2.0% 76982609 NA +3110 chr4 + 190214555 112525589 112525588 112525642 54 TTTCTAAAGAAATACTTGATTTTTTTTGTTTGTTTGTTTTTGTTTTTTGAGACA chr4 - 94230402 21342042 21342041 21342095 72888308 72888307 72888361 54 TTTCCAAATAAAAATATGCTGTTTTTTGTTTGTTTGTTTTTGTTTTCTAATATA ....:...x...x.:x..x.x.........................:.:.x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 91183547 NA +3596 chr4 + 190214555 112528727 112528726 112528863 137 TGACAACCACAAAATTTATAAATATAAGTACAACTATAAAGCCAATTCTATCCAAATTAACATCAACTTGACAGGATAGATGTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735283 92735282 92735403 1495000 1494999 1495120 121 TGGGAACAATAACAATTAGCACTGCGGGCTGAAGGACACAACCACCCCACTCCAAAGTAACCTC---TTG-------------CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:x...x.:..x.x...xx.x.::::.:xx..xx.:.x.:...x::.xx......x....x..---...-------------.....x.....:...:..:.:...............:.x.........:.x... 64M3D3M13D54M 84/121 69.4% 121/94230402 0.0% 16/121 13.2% 19793444 NA +3143 chr4 + 190214555 112528809 112528808 112528875 67 TCATATATATATATATATATATATATATATA--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681941 56681940 56682009 37548394 37548393 37548462 69 TCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTGGTCTG ........x:.:....x:.:...:....:..--.......x...x...x....x.........xx.:.. 31M2I36M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 55846868 NA +3136 chr4 + 190214555 112528809 112528808 112528867 59 TCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735345 92735344 92735403 1495000 1494999 1495058 59 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.::....x.....:...:..:.:......x.x......:.x.........:.x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 19793464 NA +3071 chr4 + 190214555 112528811 112528810 112528861 51 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.....:...:..:.:..........x....:.x.........:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 19793458 NA +3231 chr4 + 190214555 112528813 112528812 112528872 60 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.x.x.:.........x..x....x..........:. 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 107663354 82551201 +3253 chr4 + 190214555 112528813 112528812 112528865 53 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:........x......:.x.........:.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 19793462 NA +3017 chr4 + 190214555 112528815 112528814 112528874 60 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.xxx.:.........x..x....x..........:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 107663356 82551199 +3061 chr4 + 190214555 112528817 112528816 112528882 66 ATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 45067213 45067212 45067278 49163125 49163124 49163190 66 ATTTATTTGGATATATACGTGTGTTTGTTGGTTTGTTCTTTTTTTTTTTTTTTCTTTCTGGAGGGA ..x...x.:x.......::.:.:...x..xx...x..:...............:...:x:..x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 67461604 NA +3000 chr4 + 190214555 112530522 112530521 112530565 44 TGTTTTTTGTTTTTTGTGTGTGTTTTTTTTGTGGCCGTGGACAC chr4 - 94230402 53075321 53075320 53075364 41155039 41155038 41155082 44 TGTTTTTTGTTTTGTGTGTGTGATCTTATTGTAGCTGTGAACAC .............x........x.:..x....:..:...:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 59455201 NA +3161 chr4 + 190214555 112532706 112532705 112532764 59 CACAATAGGTTTTTTTTGTTTTTTTGTTTTTTTTAAACAGAGTCTCACTCTGGCTGGTG chr4 - 94230402 56671430 56671429 56671488 37558915 37558914 37558973 59 CACCAAAGTTTTTTTTTGTTCATTTGTTTGTTTTAAATAGAGTCTGCCTCGTGGTGGTG ...x.x..x...........:x.......x.......:.......xx...xx.x..... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 55861276 NA +3120 chr4 + 190214555 112532804 112532803 112532873 70 AGCCTCCACTTCCTGAGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAATAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197130 18197129 18197199 76033204 76033203 76033273 70 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....:xx.x:.:...:.:.......x.:.x.xx:x........::::.:.......:......x...... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 94335674 NA +6740 chr4 + 190214555 112539572 112539571 112539734 163 TTCTCTTTTTCACTCTTTTTCTTCTGTTTTTCTTCCACTTGTTTTTCAAAATAATCTTTAAGGAGATGGTTCAGCTGTGGTTCATACTGGTTTGCATGTTGCAATCCATCTTCCCTTCCTTAAAAAAACATACGACATGAGACAACTATTCTTTATTTTACAG chr4 - 94230402 35541470 35541469 35541630 58688773 58688772 58688933 161 TTTTATTTTTCCTTTTTCTTACTCTGTTCCTCTTCCTTCTTTTCCTCCAAGTAGTACTTAAGAACGTTGTTTAACTGCTGCTCACATTGGCTTCCATGTTGCAATCCATTTTCTCGTCCTGAAAGCAACATTCA--ATAGGATAATTATATCTCACTTCACAG ..:.x......x:.:..:..x:......::......x::.x..::..x..:..:.x:.....:.x:.x...:.:...:x.:...:.:...:..x...............:...:.x....x...:x.....x.:--..::..:..:...x::.:.:..:.... 134M2D27M 109/161 67.7% 161/94230402 0.0% 2/161 1.2% 76998102 NA +13593 chr4 + 190214555 112539860 112539859 112540079 220 TACCTTCGCAGTGTTGGATCACTCGTCCCCAAAGTTGATTTTTCCTCAAACAGGCTAAATTTCCCACAATCAACAAATGCCTCTTTCCTCTAGTCAATGCAACATTCATTCTTTTTTCTGAATCAATGAATCCTACTTGTCTTGTCCTTACACAGGACAGAATAATGATCTCCTTTTCAGCTCCCTGAAAAGCATCTACTGTGGACACCTGCACAGTTTT chr4 - 94230402 35542507 35542506 35542726 58687677 58687676 58687896 220 TACCTTTGCAGTGATTAATTACTCTTTCATAGAGTCTGTTCTTACTTAAGCAGGCCAGATTTCCAACAATCAGCAGATGCCTCTTTGCCCTTGTTAGTGCAACATTCATTCTCTTTTCTGAGTCTGTGAATCCAGTTTGCCTTGTTCTTACACACGACAGAACAACGATCTCCTTCTCGGCTCCCTGGAATGCATCTACAGTGGACACCTGGACAGCCTT ......:......x.x:..:....x.:.x:.:...:x:..:..x..:..:.....:.:......x.......:..:..........x.:..x..:.:...............:........:..x:.......x::...:.....:........x.......:..:.........:..:........:..x........x...........x....::.. 220M 173/220 78.6% 220/94230402 0.0% 0/220 0.0% 76997353 NA +17009 chr4 + 190214555 112540807 112540806 112541304 498 TACATAATACCAACCTTGTACATCTGGGATTTGTATAATGTTATCACACCAATCATAGAGCCTGCTATTCCACTTGCAATCAGTGATTGAATCAGCTTGAGTGTAAACGTAGCTTCTGCCACATTATGAAAGCTGTTATCTCTTTCTATCTGGAGTAAGAAATAGATCCTAAATTATATTTCCCAGAAAGGCTATGGAAAAACCAAGTAAAATCATACAAACAAC---AACAAAATTAAACCAGGAACCTAAACCATGTTGACTCTCATC--------AACATTAATGTCATTTACCTGTTCTAGTCCTTTAACATTATAAAAACACAGGGTTGGTAGCCATTCCAATAAAGGGCTCCGCTCTATTTCTGTTACACCATTCATGAGGGCTCCTTTGTAAAACAGATCATTAGCAATAGCACTGATTGCAGGATGACAACGGTATTGAGTTCTCAATAGAATTGGCTTGTGACCCTAAGAAATTTAAATGAAGAAA-----AATA--AAACATAATT chr4 - 94230402 35543719 35543718 35544226 58686177 58686176 58686684 508 TATATTGTACAAACCTTGTACATCTGTGACTTATAAAAAGTAATCACGCCCACTGCAGATCCATCTATTCCACTTGCAATCAGGGCCTGGATAAACTTGACTGTAAAATGAACTTCTGCCATGTTGTAAAAACTGTTGTCTCTTTCAATCTGGAAATAAGGAAGGCTTCTAATTTAGCTCTCATTAATAG--CAGTTAAAATACACTTAACTTCACAGTAAGAATGCAAGCAGAATGGA----GGAAACTGTACAATATCA--TCTTATTTAATAAGAAACCATGAGAAAACTTACTTGCTCCAGCCCGTTAACACTATAAAAACAAAGTGTTGGAAGCCAATCCAGTAAAGGACTTCTTTCCTTCTCAGAAACACCATCTATCAGGTTTCCTTCATAGAACAGCTCGTTGGCTATGGCACTAATAGCGGGGTGGCATCGGTATTGTGTCCGTAGCAGTATTGTTTTATGTCCCTAAAGGATTATGATGTAGAGAGTGTGAATAGGAAAAATAATT ..:..x:...x...............x..:..:..x..x..x.....:..x.::::...x..xx...................x.x:..:..x.:.....x......xxx.:.........::..:.:...:.....:........x.......:xx.:::.x:.x.:....x...xx.:..x:x:.x..--:.xxx....xx..xx...xx...:.xx..x..:---.:..:...x:.----....x..:x..x..:.::--...:..:--------...xx.:.x:xx.:....:..:..:..:..x......:..........x..x.....x.....x....:......:..:.x:..:x.:..x.xx.......::..x...x:.....::..:.....x..:..:..x..:.....:..x..:..:..:..x........x..:.x:.::..x....x:..:..x......:::...xx:...x...:.-----....--...x...... 190M2D33M3I11M4D18M2D7M8I217M5I4M2I10M 338/490 69.0% 508/94230402 0.0% 26/490 5.3% 76997088 NA +3038 chr4 + 190214555 112542755 112542754 112542823 69 TTTCTTTCCTTTTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTTTTTTCTTTTCTTTTCTTTTTCTTTC chr4 - 94230402 40193306 40193305 40193374 54037029 54037028 54037097 69 TTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCC ....x.:::..:...:...x..:..:x:....:xx:::.:x.......:....:...........:.:. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 72349449 NA +9400 chr4 + 190214555 112547270 112547269 112547452 183 TTCAGCAGTATGTACCATTAAGCAAAGTCGATCAAAAAGAGTTTGTTCCAATCCATTTTCATGAGCTGCATCAGAACCCTGAATAGTAGGAGGTAGCTGTTTGGGATCCCCAACAAGAATCAGCTTTTCACACTCAAACCTAAAACAGAAT--TTCAAAAATTAATCTAAGCAATTAAAATGGGT chr4 - 94230402 35544595 35544594 35544772 58685631 58685630 58685808 178 TTTAGCAGTGCATACCATTAAGCAAAGCCGATCAAAGAGAGTCTGCTCCAGTCCTTTTTCATGAATGCTCTCAGACCCTTGAATAGTTGGTGGCAGTTGCTTAGGATCTCCAACGAGGACTAGCTTTTCACACTGAAACCTAAATAAGAATGGTATAGAAA-------AAGCCTTTAAAAAAGGT ..:......:::...............:........:.....:..:....:...x.........::xx:x.....x..:........x..x..:..:..:..:.....:.....:..:.::.............x.........xx.....--.x:.:...-------....xx......x:... 151M2I8M7D17M 137/176 77.8% 178/94230402 0.0% 9/176 5.1% 77002675 NA +9595 chr4 + 190214555 112548250 112548249 112548387 138 TACCTTGCAATGGGAAGGAGAGAGGCCGGTTCAGTTATCTGACTACACTCATCCAGCACAACTACAGGAAATTTAAGATCATTCATGCATGGGAATGGGCAGGCTGCACAGGTAACTCCAACTACTCGAACCTTTATT chr4 - 94230402 35545064 35545063 35545201 58685202 58685201 58685339 138 TACCTTGCAATAGGAAGGAGAGAAGTAGGTTCAGTCATCTGACTGCACTCATCCAGCACCACTACAGGAAACTTAAGAGTATCCAAGCAAGGGAACGGGCAGGCAGCGCAGGTCACTCCAACCACTTTTACCTTTGTT ...........:...........:.:x........:........:..............x...........:......x:..:..x...x.....:........x..:.....x........:...:xx......:.. 138M 116/138 84.1% 138/94230402 0.0% 0/138 0.0% 77003186 NA +10231 chr4 + 190214555 112553832 112553831 112554006 175 TACCTGCTTCAGCAGGGTTCTATTGGTCCCCAGTTTATGCTGCTCAATGCTTTTTCTCACATAGACTCTTTCCGTAGGAGTCAGGTCTTCTTTCATTAGTGCATGTAGTTCTTTTAACTGTTCACTTTCATTTTCTGAGCCAGCATGCAAGCTAAAGAATTATATTAAAACACTC chr4 - 94230402 35546172 35546171 35546343 58684060 58684059 58684231 172 TACCTGTTGCAATGCAGTTTTATTGGTCCCCAGTTTATGCCGCTCAATACTCTTCCTTACATACATTTTTTCAGCTGGAGCTAAATCTTCTTTCATGAGAGCAAGAAGTTCTTTTAACTGTTCATTTTCATTTCCTGAGCCAGCATGTAAGCTTAAAGATT---TCATAACATTC ......:.x..:::x:...:....................:.......:..:..:..:.....x.:.:....x.:x....::.::...........x..x...x.x..................:........:.............:.....x..::...---.:.x....:.. 161M3D11M 136/172 79.1% 172/94230402 0.0% 3/172 1.7% 77007660 NA +6133 chr4 + 190214555 112554692 112554691 112554821 130 TTTGCATTCTTACCTATAAGGTAAAATTGGTTTGGCAATCTTCCTAACACTCCCAACTCTGATAAAGTTTTCAAATCCAAGACTGAGAAGCCTTTAAATAAGAAAACA--ATATAGATTCTGATTATTTAGG chr4 - 94230402 35547147 35547146 35547278 58683125 58683124 58683256 132 TTAACATACTTACCTATAGGGAAGAATTGCTTTGGTGATTTTCCTAATACTTCCCACTCTGATAAAATCCTCAAATCCAAGATCAAGTAGACTTCAAAGAAAAAGAGATGATACACATTAGGACAAAGTAGG ..x:...x..........:..x.:.....x.....::..:.......:...:..x...........:.::............:::..x..x...:...x..:..:.x.--...:.x...xx..:x.xx.... 108M2I22M 96/130 73.8% 132/94230402 0.0% 2/130 1.5% 77007545 NA +9200 chr4 + 190214555 112558145 112558144 112558340 196 CCTACCCAAGAAGTACTCTGTCAACAGCCACATTAGTAGAAGAAGAAATCAGAAGTTTCCACGG------CCTTGCATTTCCAATGGTGGGAGCTTCACTCTTTTCAAACAGCTGTACAAAGAACAAAATCACCACTGCCAGCAAGTAACTCTTTCCTGCTCCAAACACACCTAATTATTTTAAAAGAAGAAAAAAATAAAA chr4 - 94230402 35547924 35547923 35548115 58682288 58682287 58682479 192 CCTACCACAGCAATATCCTGTCAACAGCAACATTAGTAGAAGAAGCAATCAGAAGTTTCCATGGAGCTAGCTCTGCACCCTCCTT------AGCTTCACTGCTTTCAAAGAGCTGGACCAGGAACAAGATCACAACAGACAGCAAAAAGCTCTTTCCAGCTCCAAAAACACCTGATGTGTT----AGAAGAAAAAGCCAAAA ......xx..x.:..::...........x................x...............:..------.::....::::.xx.------.........x:.......x.....x..x.:......:.....x..x.x......:x.:........x........x......:..xxx..----..........:x:.... 64M6I15M6D90M4D17M 147/186 79.0% 192/94230402 0.0% 16/186 8.6% 77010221 NA +9644 chr4 + 190214555 112560687 112560686 112561029 343 TTACAAATAGAAAACAA-------TTACAATTATTTTCTTTCTTGCTTCTTACCATGTATGATTGTGATAGGGAAGGTATGAGTTTGCAGTTCCTTCACTTCTTCAATGCTTTCATGTGATGCCATCATTTGAGCTATTTGAATTAGAGCTGTAGCTTGATCCTTGTTTAACTTGTGTACCTGAATCAACTCACTAGCTAACTTCAATGTTGCTCCTAGGCTGAGTAGTTCAAA---TTTTGTACTGACATTTGTGAAGGCTGGTGGGATAAATTTTCTCTTACTGACTCTTTTG--TTACTAACTATAGTTGGCGAAGACCTAATAAAAATGAAGCAAATAAACAATTTTAAAA chr4 - 94230402 35549029 35549028 35549367 58681036 58681035 58681374 339 TTGCAAAGAATAAAAAAGCAGACTTTACAATTATTT--------GCTATATACCATGTATGATTGTGATAGGGAAAATCTGAT------GTTCTTCCGCTGGTTTCATATTTTCATGTGAGGTCATCATCTGAGCTATGTGAATCAGAGACATAGCTTGATCTGGATTCAATGAGAACGTCAGGATCATCTTTTCAGCTAGTTCCATTGCCACTTCAGTGCTGACAGATCCATAGGTCTTTTTGCCTACCAGGCTCATGGCAGGTGGAATAAATTTTCTTTTGTTGATTCTTCTAGTTGATTTTTCAGAATCA--GAATTCCTAAGAAAAATGTAACAGAAAAGCTGTGTTACAA ..:....x.:x...x..-------............--------...x:x.........................::.x...x------....:.:.:..xx..:x..::..........x.:......:........x.....:....x::..........:xx:..:..:xx.x::::.x.:....x..:x::.....::.:..x..:::..:.x:x.....xx::.:..x.---:...x.:.:x..xxxxx.x.x...x.....:...........:..::...:....:.:--.x.:.xx::.x.:.::--...xx.....x.......x.:..:.x..:.x:.x...x.. 17M7I12M8D39M6D145M3I58M2I16M2D40M 219/327 67.0% 339/94230402 0.0% 28/327 8.6% 77011658 NA +8755 chr4 + 190214555 112563080 112563079 112563286 207 TGTCTATCATTCTTTTTAAATATAAACTAAAATGAGCATAGTAATACTCACTGTTAGTGGGCCAATTAGAAGGGAAATAGCCTTTCAAAGGCAGTATTTCTATCTCATTGATAGATGATGGTCCAAAGAAAGCACTACATGCGATAAAAGTATCCAG---CTCAAAGTCTAGGGTTTTTGAAACCACCCAAAGATCATCTGAAAAGACAA chr4 - 94230402 35551737 35551736 35551934 58678469 58678468 58678666 198 TGTTTTCCATGTTTCTTAATTAT---TTAGAAT---------AAAACTTACTATGTGAGTGCCAGTTTGAGGGGTAATAGCCTTTCAGTGGTAGTAGTTCTACTTCGTTGTTATGGGTTGGTCCAAAGAAAGCACTACTTGCAATGAAGGTATCAAGGGAATCAAAATTCAGAGTCTTTGAAACAACCCAAATATCATCTGTGAAAACAA ...:.x:...x:..:....x...---:..:...---------..x...:...:.xx.x.x....:..x..:...x............:x..:....x.....::..:...x..x:x.x....................x...:..:..:.....x..---x.....:.::..:..:........x.......x........x:..:.... 23M3D7M9D115M3I50M 147/195 75.4% 198/94230402 0.0% 15/195 7.7% 77011343 NA +3160 chr4 + 190214555 112567922 112567921 112567965 44 AAAATTAAAAAACAAAAACAAACAAACAAAAAAAACAGGAAAAA chr4 - 94230402 84754831 84754830 84754874 9475529 9475528 9475572 44 AGAATTAAAAAACAAAAGCAAACAAACAAACAAAGCAAGCAAAA .:...............:............x...:..:.x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 27813091 NA +3081 chr4 + 190214555 112578638 112578637 112578706 69 AACACCTCTACGCAAATAAACTAGAACATCTAGAAGAAATGGATAAATTCCTCGACACATACATCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:....x.xx.:...:x.:..::x......:.......x.....x:...:.x.:..:.:.x....... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 96195067 94019488 +7017 chr4 + 190214555 112583974 112583973 112584194 221 ATACCTCACCAAAAGCTGGCATTCCTCATAAAGTGGTATCTTTTGACTTCTTAAATATAAGCCAATACTCTTAATATCACTTAAAACCATGCCAGGTC-GAGCTCCTTCCTGTGTTGAATATCCTGGAGTCACGTCCTCAAGCCATTTAAAGAATTTACATCGATCAGCTTTGGGTCCATCACATGTATAAAAGAGACGACCCTAAGGGGAAAGAAAAAAGA chr4 - 94230402 35553751 35553750 35553965 58676438 58676437 58676652 215 ATACCTCACAAAAAGCTGGCATCCATCAAAGACAAAAATCTTTTCATTTCGGAGGTACGCCCCAATACTTCTTAAATCATGAAGCACTACACTTGGTCTGAATTTTTTTATTTGTGAA-------GGATTCACTTCTTCTATCCACTTGAAAAATGAGCACCGCTCAGCTCTTGGGGCATCACAGGCATAGAACAGACGGCCCTAGGAAGGCAGGAGAGGGA .........x............:.x...x.:.xx::x.......x.:...xx.::..::xx........::.x.x....:xx.:x..:.::.:x....-..::.::..:x.x...x:.-------...x....x..:..x.x...:..:..:...xx:..:..x......:.x..xx.......x.:...:..x.....:.....:.::.:x..:.:.::.. 98M1I19M7D97M 140/214 65.4% 215/94230402 0.0% 8/214 3.7% 77030223 NA +13808 chr4 + 190214555 112585494 112585493 112587871 2378 TATAAGACAAGTATTTGGTATGGTAGGGGGA-GGGGAAGCAAGAATACCTTATTTGGACCTTCCTTTTTAACCATGACAAGTTTTGCAGGTTGACTATGATGGCAGGATGGTACATTATTTTCTGCGTTTTTCAGTTTCTCTCCCTTCAATGATGTATAAAATGATATGTCAACTTTTGAAAGAGCTTTCTGCAGGTTTTGTGCTAACCCAAACAGCAATATATTTAGATGTTCTACAAAAAAAAAAAAAAGAGAGCAGAAAATTAAATACAAAATAATTTTGTTTGTATCACATATGTGCTGTTTGTAGCTAAATTTGAATAGCCTTTAAACAGAGTCATATAATAGGAATATCCGTTTTTAAAAGTTATTTTCTGCTAAATTTAACAGGTCATTTGTAACACTTCTAGTTAAAAAAAAAAAAAAAAGGAAGAAAAACTCTTAACTTTCAAAAGATAATACTGGCCAAGTGTGGTGGCTCATGCCTGTAATCAACGCACTTTGGGAGGCCAAGGCGAGTAGATTGCTTGAGCCCCCTAGGGGTTGAAGACCAGCCTGAGCCATATGGTGAGACCTCATTT---CTGCTAAAAATACAAAAATTAGCTGGGTGTGGT---GGTGTGCACCTGTGGTTCCAGCTACTTGGGAGGCTGAAGTGGGAGGATCACTTGAACCTGGAAGGCAAGGTTACAGTAAGCCAAGACTGCTCCACTGCACTCCAGCCTGGGCAACATA-GTGAGATCCTGTCTCAAAAAAAAAAAAGAAGATTGTAATTTCCCACTTTTAAAACTCAGTTTTGATCTGAAATTAGAATAAAAGTTACTGT-----CAAAAACTAGA----ACATATGAAAAATAAGGTATTTAG-TATGAAAATTCACA-------------------ATATAATGT--ATTAAATT-----CTCACAATTTTACTACTTACATGAAGC---AGCAAT-CATGATACAATAAAAACACAAC------------------AGCCATACCTATGAGGCAAGATGTGAAAGTCTGCTTATAATGAGCAGGAGACTGAAAAACAGCTGGTATGTGAATTTGCCTTTGGGGAAGATAAGCAGATTTTATTTTCTGCCCACTTGGAAAGCACAGCTCAGAGCCACTTATCTCCTGCAATGGAATAATT---CAAGTTATCATA-----GCAA---CTCCAGAAAAATACTGTTTACTAAAGAGTAAATTATTTTTCATAGACATTTTTTAAAAATATTAATTTTTCTT----TTGATTTCTAGGATC-----CTTGAAAATTA---CTTTCAAATTTTAAATGAGAAACCAAATATAGCAAGAATAGCTACGAA----------TGGCAATTTTAACCC---TATATAAGAG--------TAACTTTTCTT--ATCTGCCCCTTAGTAAGTT--------------------------TTTAT--------ATATTTTTTGCTAGGAAAA-----------------------AGTTAACTG---------------ATGTGAATGGATCATTACGTATCTTTATTTCTGGTTATGACTAT---AATAAGG---ATTATTCACAATTAAC-GTGA--------AATAAGATGCACCTTTACCC----TAATGACTTAATCAGCAAACAC--AATTGACAGT-------------CAAAAGTAAAAACAATAATTGTAA------TGGTAGTAGTGATGGAAA------------CAAAAGTAGGAGCTATCACTTATTA--------AGTACTGATAATTTACCAGA----------CACTGCACCAGATACTTTCAAATAAATCATTTCATTCAATGTTCACTACTATTACGAGAGATTTTAAGTAAAGGATGATGTAACTGTAGCTCAGAGTTAGGATCAAAA-------------------AAAGCCATCTGTCCAAATTGCTCCTATGCAGTATA----TTTTGGTAATTCT----------------------------------------TTTGTTGAAATTCAGACAATAACTATTG---------GAAAAATGCACC-------ACAAGACCG---------GTACATTTCCTCACCTGTAAATCCTTTA-CACTGTAGTTGTAGCAGGTAGACCCTCCTAATACATTTTTAATTTCCTCTGTCTTAGAAGTCTGCTTTAAATTCAGAGAAAGTACTTTCTTTCTGGAAACCGAATCTTGACTGCTAAAATCCTGCCGCTGTTGATAGAGCATGCCTTTTATCATTTGCAAATGCACAGAGTCTAAAGAGCTTTCATTGACAGCATCACTCTGTCTTTCACTTGTGTCTCTAAAATGCATCCCAGAAACAGCCTCAGCAAAGAAGCCATCAGTTATTCTCTTATCAACTCTGTTTGGAGTAGCCACGTTGCATTGGGATGTGTTTTGATATTTCAGCCACTTGCTCTGAGTAGATATATTATTAAGT--------GAAACA--------------TCCCCTGGATTCACTTCCCTAGATTCTTCAGAGAAAAAGGTTTC---ATTTTGGTCCTCAGGCTC---AATGCTAAACGAAAGAACTGCTGACTTTTCACACAAATTGAGCATGGGGGAGCCAGAAGA---------CTCGTATGTGTTAGAGTTGATCATATACGAATGAGAGTCTAAGTCAGGTGGCCCATCAGTACGTGGCAAAGTAATAAGTGGAACCTGGGTTCTA chr4 - 94230402 35554368 35554367 35556842 58673561 58673560 58676035 2475 TATATGACAAACATCCCAAACTGCAAACAGACAAGGAAAAAACAGCACCTTGTTTTGACCTTCTTTTTTAACCACAAGAACCTTAGCAGGACGCATGTGATCACAGACTGGAACGCAGCTTTCTTTGCTCTCGCTTTGCTCATCTTCCAGTGAAGTGTAAGATGATATATCCACTTTCAAAAGAGCGCTGTGTAATCTTTGTGACAACTCGAAAAGCATTATGTTTAAATGTTCTT----GAGGTAGAAAGGAGAACAGAAGAGCAGTTA--ATATAGCTTTA----------AAATGT-----------TTACATGTACACAGCATTCAGACA-------------------TGCATTTTCATTTGAAATTTTCAGTTCAAT-------------------------ATTTAAATCAAAATAATTAA------------TCTGAGTTCTAAAAGAAA-------CCATGCA-----------GCCTGCAA--AACTCACGT--------------------ATTGC-----------------------------------ACATGAAATGAGCTCGTTCTAACTGCC-------------TTAATTGTGTATGAATCAAGTTTAAAGTTATATCTCCAAATGATGCAGATGCTGAA---------TAACTGTAGCTCAGAAG--------AAGGTGAGCTAGGACT------------------CTAGTAAACAGGTGCAAGGTTGCATCTTTGAAAAG-----------TATGTCTTTCTGTCTTTA-----CAATTTTAAGTATAGGCTA-AATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAGTTTTTCCAACAGACAATGCTGATTATATCTTTCCCTCTCAAC----CTGCTTTTGTGAAGCTTCAGAAATACATGGTATACAAAAGACAGCATTTTACATAGCATGGTGTTAGACATACCTGTCAAAGCAGCTTTAAAAACCTGTCTGTAGTGAACGTGAGACTGAAACTCAGTTGGTATGGCAATCTTTCTTTTAGGAAGACTAGCATGTTTTACTTTATCTGCATTAGGAAAAGACAACTCAGAAACTGTTATGTCCTAAAAATAAATAAATAAGTAGGCTGTTAAAAGTTTGCAAAATCTTGAGTGAGACAAACTTTCATAAATGGCTACT--------GTACACATCTGTCAAAATCA--GATTTTTCATGGCCTTG--TTCTGCCACCACAAGTTTCAAGATGAAGTTTTTCAAAAGCAAAAT-ACAAACCTACTTTAGCACAAACACTTGCAGAACTTGTTAGCTGGAAGTACAGAGACATGTATCCAAGAGGAATAAATTAAATACACTTGGAACTGCAGCATAGTGAGCTGGAACTATCATTCAGGATGCACACCTTTCACTGAAGTTAAAATTTGTTCCTGGAAAAACAGCTTGCATTCTTAAGAACACAGGTTTATTGTTTTTATTTTCTCCtatatatatatatagttatgtatatatatgtatttttatatatatTTAAACATAGTCTACCAGTCACAAGCAGCTGTGCTAGCTGCTAATTCTGTAGGCCTTTACTCAATGTCACAACTTGCTTTTCCATCACTAAATTGATGATATTTAAAGTATTTTAAAATTAGAGACTATACTTTGAAGCAAGATGTGGATGTTCATGAAAATGATGCTAATTTCATAGTTAAGAAAAAT-ATCTATTAGAAATGTTATTACCAATAAAAGATGGGGAAAAAAACCCCACTGTACTGATT---------TATCTCCTTGCCATCAACATTCA-GACTAAAAAAAAAAAACCTAAGTCTGGCACCATGTGAATCAAG----GAATTACCTTCATAAGGGCTTGGTCACACCACTTAAATTCCTTTAGC--AGCTGCTGTTTTGTAGCAGAGCCTCTTTTGTGATACTACATACACAGAAACATCTCATCCTATCATGCTGATAATATTGTGCAGGAAATCAGATAAATGAAGTTGCTTTGTGCAGAAAAATGTATTTCTATTAGCTAAACTGTATCTGCTTGAACAGTTACACACCTGGACATCTCCTGTCACAGT----GCGGCAGGTCAGATGACTCAACACCTTTTGTGCTGGTTCAGTTAAAGGAGTCTGATTTAAGTGAAGAGAAAGTAACTTCCTTTCTGAAATCAAATCTTGGTTGCTGCTATCTGCACAGCATTCACTAAGCACGCTCTTTGCTCTCAGCAGAGGTACAGAGCCGGGAGTGTTGTTATTCACAGTGCTGCTCTGGCTCTCTCCTGTGTCACCCGACAGCATTCCAAGGACGTTCTCAGCATAGGTGTCATCAGTCACTTCCATATCACTGCTGTTTTCAGTTATTGAGTCACAATGAGCGCTGTTTAGATATTTTAGCCACTTGCTTTG----TCTATATTGTGAAGTCCCATTTGAGAACACTGGGTGTGCAGATTCCCTTTGTCTGTCTTCCGTACACTCCTCAAACACAGAGGTTTCATAATTCCTGTCCTCAGGGCCAGAAGCACTCATAGGAAACACCGCAGGCTTGTTGCTCAAACTGACTACTGAAAAGCCATCAGATTGCTGGACCTCCTCAGTGTCAG----------TTAGGAA--AAATTCGGTGTTGGGAATCTTCTCAGCA------ACAGTGACAAGTGGAGTCTGTGTTTCA ....x.....::..::x:x.:x.:.::x:..-::....:x..x.::.....:...x.......:..........::.x..x:..x.....x:.xx.:....x:...:x...x..::x::.....x:.:.:.:xxx..x...x:.:.:..:...x..:...:.......:..x.....::.......x:.x..:.:x:......x:...:.:..x....x...:....:.......x----:.::x.:...:....:.....:.x:.:x..--.x...::...:----------.x....-----------:..x..x.:x.:...x..:.:...-------------------.x.:....:.xxx.xx......x.:.x...-------------------------.x.....xx....x..xx..------------::.:.x..::......x.-------...x.::-----------.....:..--...x...x.--------------------.....-----------------------------------.:...:x:x..x...:..:---....:-------------...::..x..:..:x---:..x.:x.x:.:.:x:....:x.:x.xx:..x......---------.x...xx.:.:::....--------.x:..:...:.:....------------------..:.xx....x:-.::..:.:x::...:x:....:-----------.:.:x:..:.::::....-----..:....:.x:xx.:::..-....x.xx.x.x...-----..x.x.:x..x----.:.....x.x.xx...:.:.x...-x..xx..:....x.-------------------.x.:....:--....x..:-----...x...:----..:...x::......---..x...-....:..:.xx...:...xx.:------------------..x.......:.x.::xx..x.x.:...::...::.:..:...:.:x..........xx...:.......xx...:.x:....x:......:x....x:.....:...x.x:x..:.x.....:x...:......:x.xx....x....:x..xx:.....x.---:.:.:.:.:.x.-----....---..:x..x:.:.:.xxx...xx....x:.:x.x.--------:..x....:.x.:....x:.--:.......x.----...--....:xx.:.-----:..x..:..x.---:.......xx:x....-.x.....x.x.x.....x:..:.x:.:.::.----------...x.:.x:x:.xx.---...x:.....--------...x.x:x...--.x....xx.x....:..:.--------------------------..:.:--------.x....x..x..:.:....-----------------------:...x.:..---------------..:.:x..:x..x:...:....x.x...x.x.xx....:xx...---..:.x:.---.::.x......x:.:.-...x--------...xxx:.:x:.......:.----.x.::....:x.:xx.x.x...--......:::.-------------:....x..:.:..x...x..xx..------..xx::.:x.x...:...------------..x.:x..:..:xx..-.::.....--------.x...::....xxx.:x:.:----------.....:..:::x.---------..xx..x..x.xx....::....-x....xx.x:.:.:.x::.....xx:.x.:x....:.x.xx..----..:...xxx...x..-------------------...x:.x.:.:x.--.::....x:.x..:..:.x.----:...x..:..x..----------------------------------------.x..:x.:..x.....:..xx:xx:...---------........:.::-------:.x.:..:.---------.x...x..x.x......x.x...:::.:-...x..----.::......x::x:xx.::..:..x....xx::.xx:..x..:xx..:......x.....:.xx..........x:...:..::x....:.:.......::....:xx...:xxx.:x::..x.:x:....:..::...:::x.:x...:.x.:......:.x::..x.:.x.:...x....:::::.....x..:..x.:......x.:x:.xx....:...:::..:x:.......x..:x.:.......:.:.::.x.....x:x......xx...x::::x..::..x..:.xxx.....x.......:...........:..----xx......:.x....--------::....--------------....:.x.x:.xx.....x..x.:..:...:.x.x.:.......---...::x.........x:.---.:::..x.xx.:..:x..:..x.:...x.::.x....:...x:.:x.:::.....xx...---------...x.xx....:..----------x..x...--.:.x..x:x..::..x:x.::x....:.------.x...:.:.......::...x...::. 31M1I204M4D30M2D11M10D6M11D24M19D30M25D20M12D18M7D7M11D8M2D9M20D5M35D19M3I5M13D15M3I38M9D17M8D16M18D12M1I22M11D18M5D19M1D15M5I11M4I24M1I14M19I9M2I8M5I8M4D15M3I6M1I22M18I163M3I12M5I4M3I33M8D20M2D10M4I3M2D10M5I11M3I16M1D31M10I15M3I10M8I11M2I19M26I5M8I19M23I9M15I44M3I7M3I16M1I4M8I20M4I22M2I10M13I24M6I18M12I16M1D8M8I20M10I13M9D23M1D43M4D15M19I13M2D20M4I13M40I28M9I12M7I9M9I28M1I6M4D327M4D15M8I6M14I44M3I18M3I60M9I14M10D7M2D28M6D27M 1319/2095 63.0% 2475/94230402 0.0% 663/2095 31.6% 77031126 NA +6759 chr4 + 190214555 112603504 112603503 112603727 224 AACTATAAAAATAT-TTTTACCTGCAAGAAGTCAATCTGCATACACGTGCTAGGTAACTCTGGTGTC-----TCTGTCATAAAGTTTTCATACTCAGTGCTATCTGGAAACTGACTGCATCCTAGCTGTGAGCTGTGTCCTCTGACCATTACACCACTAGTAGCTGATCCTTTTACTTGATGTCCTTGAAACTCAACAGGCTACA-GGTA------AATTATTA----AAAATAAGAACTG chr4 - 94230402 35559031 35559030 35559266 58671137 58671136 58671372 236 AGTTAGAAAAATATGTTTTACCTCTCTGAAATCAGAAAGAACATAATTGCTTGAAAATGGAGGTGACAAAAATCTCTCAG-----CTGCAAACTCCATGTTGTCTGGGTACTGCTGCCATCCCAGCTGTGAGCAGGGAACTCTCAACATTATCTCACTAGATGCCGATCCCTTTATTTGGTACCCTTGAAACTCAACAGGCTACACAATACACTGGAATTATTAACTGAAAATGAGCACTG .::..x........-........x:xx...:...:xxx.x.:.:.xx....x.:x..:xxx....x.-----...x...x-----:.x..x....x:..:.:.....:x....x:xx.....:..........x.x.xx....x.x.....:x:......xx..:.....:....:...:.::......................-::..------........----.....:..x.... 14M1I52M5I8M5D120M1I4M6I8M4I13M 157/219 71.7% 236/94230402 0.0% 22/219 10.0% 77044473 NA +3912 chr4 + 190214555 112605218 112605217 112605314 97 TGGCACAATGTTGGCTCGCTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGTGTGTACCAC chr4 - 94230402 18197114 18197113 18197202 76033201 76033200 76033289 89 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .....:x.....------..:..:..:xx.x..:.::..........x...x..x.x........::x:.........:......--:...:..... 12M6D67M2D10M 67/89 75.3% 89/94230402 0.0% 8/89 9.0% 94408104 NA +7583 chr4 + 190214555 112619161 112619160 112619692 532 TTTGGTTTAGTAGCAATTTTTAAACTTCCTTGTGGTTGTTTTTGAGGAAAATGCTCTGTCATCTCAGAATTTAGTTCCTCAC-ATGAACTAGA--TGATTCGGACTTCAGAAGAGCTAATATCTGTGCTTTGCTTCTGATGTTTTGTGAAACTCCTGAATAGTGAGATGCCAAACTATCTCTTTTCACAGGCTCATTGGTCAGTAAAGAGTCTGAAAGCTTATTTCCAGAATTGACAGGTGAGCAAAAATAATTTTCTTCACACAGCACTTCTGGGTTAATCTGGAAGGATGGAGAAAAAACC---GAAGAAAAATCCATGGCATTTCT-----------CTCCCTGTTCTTGTAAGTCACAATGTTCTCAGGGTCTGCCAGTATATTATTTACATCTTTCTTGCCAACAGTAGGAAACAAAGGAGGCATGCTGCAGAATGGAGAAAAAATAGTAGGGCCAGTTTTCTTAGCCTCATGTGATGCAGC---TGATTCACCACTTTCCATAATAACCATTTTCTTTGGAACCTGACGTGGTCCTTGAAAACCCT chr4 - 94230402 35562190 35562189 35562706 58667697 58667696 58668213 517 TTTAGGTTATATGAACTATTTATGTTTTCCAGTGCTTGAGATCTATGACA---TTCTGTGACTTCAGATGTTGCTTGCTCTCTGCAGACTTGTGTTGTTTTAGATTTCAAAAGAGCTATGATCTGTGCAGCGCTCCTGATGTTCTGTGACACTGCCCCATGACCAGCTGTCCAACTACTAGATTTGGTGTGCCCACTAAATACAGGAGACTCTGG--------CTTTACCATGGAC---TGATCAGAATT---TTTCTTCTCA----GTTTCATTATGCGTATGAAGAAATGGAAATGAAACCACTGAGGAGGGAGTCACATGATCTCTGTTATCTGTACCTCCACCTTCATGCAAGTC----TGTACATAGATT---------TGTT-TCTGCATTCTTCTTGTAAACAGTAGAAAATAAGGGAGAGGTAATATAAAACCTGGATGGAAAAGGATCTCGACTCTGCTCAGATATAGGCAATGCTGCCACTCCTTCTCCATCTTCTACTGTCGATACTTTCTTTTCAACCTGACGTGGCCCTTGGAAACCCT ...:.x...xxx.x.x.x....x::..:.:x...x...xxx.:x.x..x.---:.....x.::.....xx..:x..x...x.-::::...x.x--..x..::..:....:........xx........xx:...:........:.....x...x.:xx..:::x..x..:.x.....::xxx...x:::x..:..:.::x:.xx::...x....:--------:.::.xx..x...---...x..:..x.---.......x..----::...xxx:.xx:.x..:.:::.....:.x:.....---..:..:::.x:..::xx..:...-----------....x:x...x..:.....----...x.x:..:x.---------.:..-.:.:...::......:x........:...:..:....:x:.:x.::.:..:xx:..x::..x..x.xxx.x.x.:.x..:..x:x:.x.::....x..---.xx...x...::...:.:x:.x:x:.:.......xx............:.....:....... 50M3D29M1I10M2I120M8D13M3D11M3D10M4D36M3I23M11I19M4D12M9D4M1D98M3I62M 304/497 61.2% 517/94230402 0.0% 55/497 11.1% 77056971 NA +5442 chr4 + 190214555 112619994 112619993 112620221 228 AAACTTACAGTAAACTTCCTTTTTAAGCCAGAGGGCTGACATCCAAGAGATCGG---CCAGAGGATATAA-ATGTCC--TTGAATTTA--ACTCTGGTGCTTCTTTATTGACATTCTGCTTAACAATACCTATGGCTCCAGCAACTTTAACCTCTTCAACTGTGATTAAGTATCGATCACTTTCTAAGTCATCTCCAGGTTTCACCTGAAAGAATAAATGTCAAAATCACATACAT chr4 - 94230402 35563416 35563415 35563640 58666763 58666762 58666987 225 AGACATACTGTAAACTTCCTCTTTAAGCCAACAGACAGATGCCTTGAAGGTAGAACTCCAGGCTTTACACCACGTCTATTCACATCTACTACTTCAGCTTTCCTTGGTTGATCTTC------GCAAGATTTTTCCTTC-----ATTTTTGCTTCTTCAACTGTGATCAGATATCGTTCACTTTCTAAATTATCTCCAGGATTCACCTAGGAAAAGAGAATGCAATAGTGTGTACGT .:..x...x...........:.........:x:.:.x..:::.:x::..:.x.:---....:xxx..:.x-.:...:--.::x..:..--...:::.:x:.:...x:....:x...------:...x.::.x.xx:..-----.:...x:.:..............:.::.....x...........:.:.........x.......:::.:..x.:.xxx...x.x::::...:. 54M3I13M1I6M2I9M2I26M6D16M5D93M 140/217 64.5% 225/94230402 0.0% 19/217 8.8% 77056578 NA +5305 chr4 + 190214555 112631923 112631922 112632017 95 TACTCACTTTGTTTCCTAAGTGAGTGATCTTCAGAATTCCATCTTGCCACACTTTTGACTTCTTCATCTTTTGATGAGTATATAGAACCTTATTT chr4 - 94230402 35564202 35564201 35564296 58666107 58666106 58666201 95 TGCTCACCTTATTTTCTCCAGGTCTAATCTTCAGAATTCCATCTTGCCATGTTTTTGATTTTTTCATTTTTTGGTGAGTGTACAACACCTGGTTT .:.....:..:...:..xx:x.xx.:.......................:::......:..:.....:.....:.....:..:.:x....x:... 95M 71/95 74.7% 95/94230402 0.0% 0/95 0.0% 77067721 NA +13961 chr4 + 190214555 112644664 112644663 112644887 224 ACAGGAATGGAAACTGAAAGTGGAAATCAGGAAAAGGTAATGGAAGAAGAAAGCACTGAAAAGAAAAAAGAAGTTGAAAAAAAGAAACGGTCACGAGTTAAACAGGTGCTTGCAGATATTGCTAAGCAAGTGGACTTCTGGTTTGGGGATGCAAATCTTCACAAGGATAGATTTCTTCGAGAACAGATAGAAAAATCTAGAGATGGATGTAAGTTTGCTTCAGT chr4 - 94230402 35568971 35568970 35569191 58661212 58661211 58661432 221 ACGGGGATGGAGACTGAAGCTGCAAG---AGACAAAGCCATGGAAGAGGAAAGCACTGAACAGAAGAAAGAGAGGGAGAAGAAGAAGAGGTCGAGGGTTAAACAGGTGCTTGCAGATATAGCTAAACAGGTGGATTTCTGGTTTGGCGATGTTAATCTCCACAAAGATAGATTTCTTCGAGAACAAATAGAAAAGTCCAGAGATGGATGTAAGTTTGTATTAAT ..:..:.....:......:x..x..:---:..x..:.:x........:............x....:.....::xx..:..:.....:x....:x.:.......................x.....:..:.....:...........x....:x.....:.....:....................:........:..:...................:x.:.:. 26M3D195M 179/221 81.0% 221/94230402 0.0% 3/221 1.4% 77075693 NA +10585 chr4 + 190214555 112646336 112646335 112646679 344 TTTCATTTTCTTTAGATGTTGATATATCACTACTTGTGTCTTTTAACAAAATGAAAAAATTGACTACTGATGGGAAGTTAATTGCCAGAGCATTGAGAAGTTCAGCTGTTGTAGAGGTAAGAATCAAGAATAACTACTGTTTATATTTA-------TAGTTTA-TAATTATAAAGAATGTTAACGTAATGATTATTATATGATTATAGCTTACAATTATAAATAATATTAGTTTTATTAATGTAATATACTATTTTAAAGCTTGATTTGGAAGGCACCAGAATCCGGAGGAAAAAACCTCTGGGGGAAAGACCAAAGGATGAGGATGAACGCACAGTGTATGTGGTAAGCTT chr4 - 94230402 35570633 35570632 35570949 58659454 58659453 58659770 317 TTTTTTTCTCCTCAGATGTTGACATATCACTTCTTGTTTCCTTCAACAAAATGAAAAAATTGACTACTGATGGAAAATTGATAGCGCGGGCAGTTAAAAGTTCATCTGTTGTAGAGGTGAGTGTT--TAATATTTCACTCTTGTGTTTGCTGCAATTAGATTAGTAGTTATAGTGGA-ACTGATGTAGTCAGTCTTACA------------------GCAAAT-------GCTTTTTTCTGGTTAAATTCT-------AGTTGGATTTAGAAGGAACTAGGATTAGAAGGCGCCGGCCACTGGGTGAACGACCAAAGGATGTGGATAGTCGTACCGTCTATGTGGTAAGGTT ...:x..:..:.:.........:........x.....x..:..:.............................:..:..:..x..xx.:...x.x.:.......x.............:..x:.:--x....x:.xx:x:..:.:...:-------...x...-..:.....:x.:.-::.:.:...:.x.x.x...:.------------------::....-------.:...x..xxx..x.x..x..-------..:.x.....:.....x..:..:..:x.:...x:xx::..x.....x...x............x....::x..:..x..x...........x.. 125M2D22M7I7M1I13M1D21M18D6M7D21M7D94M 223/309 72.2% 317/94230402 0.0% 43/309 13.9% 77075703 NA +13185 chr4 + 190214555 112646752 112646751 112646961 210 ATTGTGAAAAACTCTAATATTGCTTTTAATTTATAATAGGAGTTACTTCCCAAAAATGTTAATCACAGCTGGATTGAAAGAGTATTTGGGAAATGTGGCAATGTTGTTTATATAAGTATACCACATTATAAGTCTACTGGAGATCCAAAGGGATTTGCGTTTGTGGAATTTGAAACAAAAGAACAAGCAGCAAAAGCAATTGAGGTAAGT chr4 - 94230402 35573777 35573776 35573981 58656422 58656421 58656626 205 ATTGAGAAAA----CAAGATTTCTTTTTCTTT-TAATAGGAGCTTCTTCCCAAAAATGTCAATCACAGTTGGATTGAGAGGGTGTTTGGGAAGTGTGGCAATGTAGTTTATGTCAGCATACCCCGGTATAAATCTACTGGTGATCCAAAGGGATTTGCTTTTGTTGAATTTGAAACTAAAGAGCAAGCAGAAAAAGCTATTGAGGTGAGT ....x.....----:..x...x.....xx...-.........:.x..............:........:........:..:..:........:...........x......:.x..:.....x.:x.....:........x.................x.....x...........x.....:.......x......x........:... 10M4D18M1D177M 175/205 85.4% 205/94230402 0.0% 5/205 2.4% 77072975 NA +10757 chr4 + 190214555 112647191 112647190 112647567 377 TTTTACA--GAAGAGAAGAAAAAGAAAAAGAAGAAGAAAGGCCGAATGAAAAAGGAAGACAATATCC------------AAGCCAAAGAAGAAAACATGGACACAAGCAACA---CCAGCATCAGTAAAATGAAAAGATCCAGACCCACATCTGAGGGCTCTGACATTGAGTCCACTGAACCCCAAAAGCAGTGCTCAAAGAAAAAGAA---AAAACGGGACAGAGTTGAAGCATCTAGCTTACCT---GAAGTCAGAACAGGGAAGAGGAAGAGAAGCAGCTCTGAAGATGCAGAATCCCTAGCTCCCCGATCAAAAGTAAAGAAAATTATTCAGAAAGACA----TCATT--------AAGGAAGCATCAGAAGCTTCCAAGGAAAATAGAGGTAAAACTACAAGGTTTT chr4 - 94230402 35576265 35576264 35576667 58653736 58653735 58654138 403 TTTTACATAGAGGAGAAGAAAAAGAAGAAAAAAAAGAAATCCAAAATTAAGAAAGAAGGCAGTGTACAGGCAGCTGTAGAGGCAAAGGAATCTAATGTGAACACTA-CAACAGAGCAAGCACC--CAAGTCAAAAAGGCACAGAACCTCATCGGAATGTTCAGAAATGGGGGGAACTGAGGTTCACAGACAGCTCTCAAAAAGAGAGAAAAGAAAATGGGACAGATCAGAAAGCTCAGAAGTACCTGTGGAAAGCAGGCCAGGAAAGAGAAAAAGAAGTAGCTCTGGAGATGGTGAGACATCAGTT------GCAAAAGTCAAGAAAACTGTTCAGAAGGATGAAGTTCATCCTGTAAAAGAGGAAACAACAGAAGCTCCAAAAGATTCTAATGGTAAATTCACATGTCTTT .......--..:..............:..:..:......xx.x:...x..:..:....:..:.:.x.------------.:..x..:...xxx..::..:....x.-.....---.x....:.--:..:x::.....::x....x..x....x..:x.:..x..x..x.:.xxx.....:x::..x.::...:x......:.:.:....---....:........x:x...:xx..x::xx.....---...:x...:x....:.....:..:.....:.......:.....xx..:x.x::..:.------x.......x.......:.:.......:..::----....:--------:.....:..x........:.x..:..xxx..:x......x::...x.x:... 7M2I58M12I27M1D5M3I8M2D84M3I34M3I57M6D31M4I5M8I52M 254/368 69.0% 403/94230402 0.0% 44/368 12.0% 77070926 NA +8082 chr4 + 190214555 112647669 112647668 112647842 174 AGCTTTTTTATTTATTTCAAGATATAGAAATCTCTACTGAAGAGGAAAAGGATACTGGAGATCTAAAAGATAGCTCTCTCTTGAAAACAAAAAGGAAACATAAGAAAAAACATAAAGAGAGACATAAAATGGGAGAAGAAGTTATACCATTAAGAGTGCTATCAAAGTAAGTCT chr4 - 94230402 35577344 35577343 35577514 58652889 58652888 58653059 171 AACTTTTATTTTGGGTTTTTGATTTAGAAGTTCCTCTGGAAGATGATAAAGAT---GGTGATAAAAAAGACACATCCCTTTCAAAATCTAAAAGAAAACATAAGAAAAAACACAAAGAAAGACACAAGATGGGTGAAGAAGTTATTCCACTCAGAGTACTCTCAAAGTAGGTTT .:.....x.x..x:x..:xx...x.....:.::..x:x.....x..x..:...---..x...xx......:.xx..:..:.::...x.x.....:.................:.....:.....:..:.....x...........x...:.x.....:..x........:..:. 53M3D118M 127/171 74.3% 171/94230402 0.0% 3/171 1.8% 77070325 NA +43164 chr4 + 190214555 112647864 112647863 112650685 2822 GCTTAACAATCCATCACCATTGCTAAAGTGCAATTCCAATTTATATTCAACAGAGTTGCATATTAGCAACAGTAATGGCCTGTAGCCAAGAACTGCA-----CACAGTGTGGGCGTTAACGCAATTGCT----GATTAGGT---AGGAACCACCACA-CTCAAACATGGAAGCACTTATTTTTGTCATGT-CACAGCAAGTGCCTCCATGTTAAAGTAGAGGGGGCCC--------------------------CTTAA--------------------------------------------CAGATGTAAAAATACA-------AAATAAAG---CTTAAATATATGAGCTGCGGTCAATACA-----------------------------------------ATAAAGTTATTTTCTAAAAAAATAATAAAAAT----------------------------------GT--AAAAGGAAGACTTACCATCACCAAAACATGGAAGCACTTACTTCTTTAGTTTCAAAGCAAGTACATCCACGTTTAAGTGGTGGGGAGCC---------------------CAGTCT-TGGAAAAAGTTAGAA---TCCTTTAACC------------------------------TGTAACAAGC-----TTAGTAACCTTAAAAC-------ACAATAACAAAAAAATTT--------------TGTAACAAAAGGTGT----GCTG---------GCTT---------------------------------GGAGACACCTCCACTGAAACATGGAAGCACTTACTTTTGTTTCACACAGCAGGTACCCCCATGTTAAAGCAAAGGGGATCCCTT---------------------------------------------------------------------------------CAAATGAGGTTAGCGTGT-------------------TCT------------------------------------ATTTTGGAGAAGTAAATTGGATTCACTCCTACTAAAACATGGAAGCACTTACTTTT--AAAGTCACAGAAAGCACTTCCATGTTAAAGTTGAAGGGAGCCCACCCAACATACAACT--------------TCTTTGGACTTCAGAGTATTTAGAGCTGAGGAGAAAGAAAACAAAATGGCATAACTTT--------------------AGAAGAAAAAAATTTTTTTA----CCTTCCTGAACTAGTTCCCAAAGATTCGTGTTCTCCTCCAGAAGGGTAAAAGGCAGGGACTTCAGCCACTTCTATTTATACTATTCTTAACTCTTGAATTCCTTTTGCCTTTTTATCTCAGAGAATCATTACAAGGGCCTTTTGTTATTTTAATGTATCAGCTCT-CAGGGAATGTATGATCCTGGGTGGGTCTGGATCCTTTTTTTTTTTTTTGAAGTATACAGATGTCAATGTTAACAGCTAAAACCATTACCACAAGATATCTTCCTCTTAAAAAAAAAAAAGAAAAAGAAAAAGAAAATCTCCTATCTGCTTGTTTGATGGCATAGATTAGGGTAACAATGAGT-GCTCCCACTGAGCCGAGAAAGGCATTGTGTTTCTATCTGGAGGAACTCT----GTTTGAAGAAGCATCTACATGTTAAATGTATGTAAATAAATAGATTGCTTCCACGGGGTGTTTTGTTCTACTTAGAAATTCTTTTTGATTCAAGTAAATACTAAGGAATGTTATC-TCTCAAA-------TTGGAAGCAGTTTAACAAATCTTTAATCT-CGCCC-----TTTTCCCACAGAG---ATGACTGATT-------TAGT-------AAATGTT--------ACTAGTTAAG-----------------------GAATTAATGCTAAAATT----TTACTTTTATAAATTAAAATACTTCAGACACTCAAAAATTTAATTGGCAATCTTAAAACATTTAATCTGAATATTGGGGGAA---GAGGAACTCC---------------CTTAGCTTATTTTGCTAAATGTCTTTAGAACCTAGGAAATATTTTGAATATGTGTTTAAAGAAACAGGAAAGTTGGTG------GAGGAGT------------------------------------TGCTCCAAGTCATTGTGAATGTATATATTTAGATATTTCCCTATTTACTTTTTATATTTAGTCATCTGTTATCACCATTTCT-----TTCCTTGTAGGAGCGAATGGATGGATTTGAAAAAAGAGTATTTAGCGCTACAAAAAGCTAGCATGGCTTCTTTAAAAAAAACAATATCCCAAATAAAATCAGAGTC------AGAAATGGAAACAGACAGTGGAGTACCTCAAAACACTGGAATGAAAAATGAAAAAAGTAAAGATCACTGATAGTTTTGACAACATTATAATGTACTTATATATGTAAA---TGCTATCTCTGAGTTGTTAT-----------------AAGATAAATTTTAATTTTAAAAAACTTGATTATTCTATTTCATTATTAGAACAATTCTTGATTT-------GTTAAG-TTATCCAGATGTGTTACTTA-CTCTTGATATAAGAATATTTAAAAGGCTCATTTAAAACAATTTTTTAAATAACCTGAGTTTTCTCTACAGTTTTCATCAAGCACATGAGTGCAGAGTT---TGCAGACTGAGCAAGTTTGTAGGAATG----AAGATTGTAGTTTCTCACCTGTTAATTTCATTCTGTAGTATGCA-CCACAA--GCAGGAACAAGTTAAAGCAGAATTCCTATGAATTCAAAA-----TTAGGATACATTTTAAATTCTCATTTCTTG-TAAAAATAAATGTTCACGTTT-----GAATAATAATGTATTTAAAACACAGTATCCTTTAACTTTTTTT------TAACTTTATTGAGTAAAAATTTACTGTTCCTTTGTTCAGGGAGAAGGGGCAAATTTAAAGGCTTTACGAATGCTCTTCTAGCAGTAACAATTTGCATGTAGAATAATAAAACTTTCTGAGTTTTATTCATGGTA----TTTTGAAATAAGCAGTATGAC----ATATAACCTTTAATTGTTTACTTTAAAATTAAATACGTTTTAAATT---ATTTAAATC---TGCCTCAGGAATTATTCTAAGGTAGTCCTCCTAAGTATTAAATTGTTGTTAAGTGTAAGAGATTTAGTCCTGGTCTTTTTCCTTTTCTAATC-AGCAGCCAACAGGGAAGAGTGTCGCACCCAGGAGAAAGTTAATGCAACAGGACCACAGTTCGTGAGTGGAGTGATTGTGAAGATCATTAGCACAGAGCCTCTACCTGGCAGGAAACAAGTCCGGGTAATGATTTTGAGCCCCTAGGGTATTTGTTCCTTTCTTCTCTTATTATTTCCCTGTGTGAAAATGTTTTGAATATGGAAGATAAAACAAATCAAGTTAGAAT chr4 - 94230402 35577973 35577972 35581314 58649089 58649088 58652430 3342 GTCTTACAGTCCATCACCATTGCTAAAGTGCAATTCCAATTTTTATACAACAGAGTTGCATGTTAGCAACAGTATTAGCCTGTAGCCGAGAAGGATGAAAACCAGAATTTTGA----AAACCTATTCCTCTTCGGTTGGGTTTCAGGAGACACCACAACTAAAACATGGAAGCACTTACTTTT-TCAGGTGTCCAGCAAGTACCTCCATGTTAAAGTTGAGGGGGTCCTTGCCGTCTGTATTACTACTAGGATACTTAATTCTGTTCTGCATGCAAGGCTTTTATGTCCAGTGCTGAGCAGTGCTGATATATAGAAACAGGATGGAAAACAAAGTAACTTGTCTAGAGACATTGTGGTACAAACATTGTGAAGCCCCACACTCCCTCCCCGGTAACATAGAAACCAAGAAGGATGTTCTTCAAAAACCAAAAAGAAATTGTTCTTCTGTTCCAACATCCAGTTAAGTTTCCAGTTGAGAAAAAGGATTCACCATCACTAAAACATGGAAGCACTTTCTTTTCAGAA--CAAAGCAAGCACATCCACATTTAAGTTGTGGGGAACCTTAAGTAGAGAGACCACATTTCTTTCTGTAAAAGAAGCTAAAAAATTACTGTAACAATGCCATCAAATCATGCAACTAAATGATAGTTTAAAAAGCCAACATTGGTTATTTCAGCGCTGGGTGCACGCTAAGTGAAGATCTCCATGCACCCAGCGCTGCAATAAACCATGTCAGCGCTGCGTTGTAATGCTTCTTTCTCCTCTTAGAAAAATGTTTCAGACATTAGGATCCACCACCACTGAAACATGGAAGCACTTACTTTTGT---AGGCAGCAGGTACCTCCATGTTAAAGCGGAGGAAGTCCTTTGAAAATCCTTCTGAACCTTACTGTAGGTTCTGTAACTGTCTTGGTCCTTATCTGCTGCTTTCAGCCAAAAATCTCTTTGCCCAAGTCAAGTAATCTTGTGGGAAGAAAAATCAAGCAATCTTGTGGGGACCAAAATAGGAATAAAGTCGTGGACGGCATTTCAGAATTGAGAACAGGATTCACCTCTACTAAAACATGGAAGCACTTACTTTTGTAAAATCACAGAAAGCACCTCCATGTTAAAGTAAAAGGG-GTCCACAAAAAAAAAAGTTACCAACGGTGCTCGTCTTCTTCCACCAGCATCCTGAGAATAGTGCAAATACAAAGAAATAAGTTTTAAATTTTAGCGAAGTAAAAGAAAATCAGAAGAGAATAAGCATTGTAAATACTTGCCTGACTCATTCCCCACAGTCTGCTCTTCTTTCGAGACAAGCTAACAAGTA---ACTCCTTGTGCTTGTATTTATACCATACCTTGCCATGGAATGG-TGTTGCCTTTTTATCTCAACGAATCATTACGTGGGTCTTTTGTTATTTTAATGTCT--GCTCTGTTGAGAATGTATGATCCTGGGTGAGTCTGGATGCTTTTTTT-------GAAGTATACAGTTGTCAATGTTAACAGCTAAAACCATTACCACAAGATATCCTCCTCTTTAAAAA-----------------------TCCTCTATCAGCTTGTTTGATAGTACAGATTAGGGTAACAATGAGTCGTTCTCACAGTGGCACTATAGGCATTGTGTTTCTGTGGAGCAAAGCTCTAGCTGTTTGCAGAAACATCTCCATGTTAAATGTATGTAAATATATAAATTGCTTCCATGTGGTGGTATTTTTTAAGCAGAG-----------TGCATTTGAATAGTAAGGAATGTTCTTATCTCAGTAGGTTTTTTGGAG--AGTTTAACCAGTTGTTGATTTTCGATCAATGATTTTTCTAGAAAGTAAATGACTGATTCTTAATATAGTGACACAGAAGTGGTTTCACTGAACTAATTCGGTGAATTCAGAGTTCACTGTCTCTGAATTAACTCTGAATTTGCCTTTGCCTTTGCGCTCTG---TAGTTCCAGCAGAATACAGTTTACT--GCTGTTCTAAA---TGTTTTCTGAATGTGCAATGAATTTGAGTCACTCTACAAATGAGGTTAATCTTGTTTTGACTTGCTTGAAATACTAAAAGCTAAAGCAAAATTAAAAATGCAGATATTGACAAAGCTGAAGGTGAGCAAACTGTGAGGAGTCTTCTAATAGGAAAGATCTACACCGCTTGCCAAGTTTAGTTTAAGCCATCATAGTCAGATTTGTCTGAGTTTCTTAACATT--ATTTTTGTTTTTA--CAATTGACAT-ACCTCTCCTGTGTCCTCTTTACAGAACTGAATGGATGGATTTGAAGCAAGAATATTTGGCTCTTCAAAAAGCCAGCATGGCCTCCTTAAAGAAAACCATGTCCCAAATCAAACCTGAGCCCGTGGGAGAGATGGAAACGAATAGTTGTGCACCAAAAAATCTTCAGTGTAAAAATGGCGAATGTAA------CTGTTTGTTCT-------TCATTTTCTTCTTATATGGTTAAAGAGTGCT-----TAAGTCGTTGGTCCTCCAGAAACATAGAAAAATAAAACTTATTTTCCTATAACGCAGGTGTTTTTTCTGAATGTCAAGCT--TCCATCATTTAGATTGGGTTAGGACTAAGGAATTTTGTAACAAAACAAGTGGTGTAAGAACACTCCA--GTTTCACTTG----------TTAAACAAA--Gatttttatatata--------taaatatatatatatttaGGTAATTGTAATTTTAAAAGCCTTGTAGAAATACATCAAGAATG-AGTTTCTTGATG--TAACATTGGCCTGTGTTATTTAACCACCCCTTCTGAGTCGTACGAAACTATTACTCTGAGGCATTCAGAAATGCCTTACAATGGGGTTTGA--TCAGGTTTATAGCTAGAAGTAAAGTTGTATGTTTTTCTGAAATAGGATTGCTTTCTTCCCCCCGTATCCTCTTTCTTTTCCTGTTCACTAACTTTG----ATAACAGCC--CTGTCACTTACTTTAAAT--------CACTCTTGAA---TTCAGGATTTGATTATTAATTGTGATGA-------ATAGAATAAAAAATATTCTTGAGTGCTTGTGGAGCTACAATTTTTTTCTTAAACATAATGACTTCAGTGAAGAATCTGGATGCATGATTTTAAAATATGTACTTTTTTCATTTCTGTGTACATCACGTTGCTTATGTGTTTTTGTAGAG----ACTTTTGCTTGTCAAACTGAT---AAATGTGAAA--------CTTCTTCTCTCCTTTTTTCAAATTGATCAGCCACCAGTGAAGATGGTGCCCCTCCTGTCAAGGCTAACACAATGGGGCCCCAGTTTGTGAGTGGAGTAATTGTGAAGATCATTAGCACGGAGCCCCTGCCAGGCAGGAAGCAGATCAAGGTAATGCCTTTGTAACCTCAGGGTAGCTGTTAGCCTTTCCTTACAGTGCCCCCC-------AAATG-TTTGAATATGGAATACCATTTAAA-CAAGTTGTAGT .::.x...:.................................x...x..............:............x.:..........:....xx:::-----..x.:.x.x.:----..xx.x...x..----.:..:...---....:x.......-..x.................:....-...x..-:x........:...............x.......:..--------------------------.....--------------------------------------------.x...:..x.:.x...-------...:....---...:xx..x.x:x::..:...xx.x...-----------------------------------------.x..:.x.:..:.::.....xxx..x.:....----------------------------------..--.:..::.:..:.:........:.................x...:.:x::x--.........:........:.......x.......:..---------------------.xx...-.::..:...:..:..---.x..x....x------------------------------.x...x....-----..:..x.::.:.:x:.-------..:x...xx:..:.x:.:--------------..:..:...xx:...----....---------....---------------------------------...xx....x..............................---.x:...........:............::...:::...:..---------------------------------------------------------------------------------...:.x.:..x.x.x...-------------------...------------------------------------....::..:xx.x:..:x........::............................--...:.............:.............x:.....-.:....xx..x.x.x.::.--------------....:xxx.x:...x:.x:.x...::x.x.x.:.x.x...:x..x.x.x:x...x...--------------------......:..x..x:x..x..----.:.x.....x::.x.:....x..x:.xx.x....:::xx::x.:.x...x.:.:.---...:.xxx::...x.........:..x.:.x:.:x.x....xx-.x................:x..........:x...:..................x.--.....-:x.:...................:........x........-------...........x.......................................:.......x.....-----------------------..::.....x...........:.:.:....................-.:..:...x.x.x.:xx.x...............:.xx:.x::.:....----.....x....:.....x.....................x...:..........:.x....x.x.x..:..xx:...:-----------.x..xx.:....x...........x.:-.....:x-------.....:--........x.:.:x..:..:.-..x:.-----....:.:.x.:..---..........-------....-------..:..x.--------....:..x:.-----------------------.......:x..:..x..----..:.:...:::xx:.:---..x...x::..xxxx.x.:....x.--..x:.::....---.x.xx.......:.xx::x...---...xx....:---------------...:x:..:x:.....x:.x:.x:.x.:.:.:x.:.x..x...xx:...:::x:.x.x:.x...xxx...:..x:.::------.......------------------------------------.:x.::...:...::.::x::x..x.:.:.:::.x.:.:xx:...--x.....:.x....--..x:..x:..-...x:.:..-----:..:..::..:.x:.................:x....:.....:..x..x........:........:..:.....:.....x..:........x...:.x...:.------...:........::.:...x.x.:...xx....:x:.x::xxx.......:x:..x....------...x.x...:.-------.:..xx.x.x.......:xx....---....-----.:...:...:x-----------------..:.....x:...x...:xx.x...x:::x.:..:.x.:.x.x.:.:.::x:--.:.x.x....-------....:.-:..xxx.:x.x...x..xx.-.xxx..:.:......:.:.:x.--.x:...:..:----------.....:..x--..x....x.x..:.--------:..::.:..:x:.::xx..x.---..:.:x:.x.:x.:x:......:...:----....x..-.......::x:x--...:x.::x:....:x...x:.-....xx--x.x.::x.:x::x...x:.xx.:..:x.x.x.....:..-----...x:..:x:x...:.--..xx:...x.x.-..:..:....xx.x:.:....-----:....:x.x..:x..:xxxx.x.x.......:.xx.....::.------.......:----:...x.:::--....:x...xx..:.::x--------..xx:..:..---..:.x..x.xxx:.x:..::x..:.::.-------:........x...xx..::.....x:.xx.x:x.x..----....xxxx...:..xx.....----:.:x.:xx.:.::x..:x.:x...x...x..x:...x....xx...---:.x..x...---.xx..:.x.x:..x..x..::.----x..::.:xx.:.:...:..x.---..:...:.:.--------.:.xx...:.::::.....x...:-.x......x...x.....xx..xx.x.:.xx.xx..:.:...::...::..:..x.....:...........:....................:.....:..:..x........:..::..x:.......x:....x:x..::......x:....xx::.:.:..:x:.x.::::...-------.....-.............x.:x.xx:...-......:x.:. 97M5I11M4D12M4I8M3I13M1I25M1D6M1I37M26I5M44I16M7I8M3I28M41I32M34I2M2I50M2D37M21I6M1I15M3I10M30I10M5I16M7I18M14I15M4I4M9I4M33I40M3D41M81I18M19I3M36I56M2I38M1D19M14I58M20I20M4I55M3D43M1D56M2D5M1I41M7D65M23D46M1I49M4I77M11D27M1I7M7I6M2D21M1I5M5I13M3I10M7I4M7I7M8I10M23I17M4I16M3D25M2D11M3D22M3I10M15I78M6I7M36I45M2D13M2D10M1D9M5I106M6I60M6D11M7D24M3I4M5D11M17I52M2D10M7I6M1I20M1I22M2D10M10D9M2D14M8D21M3I27M4I7M1D12M2D22M1I6M2I39M5I16M2D12M1I21M5I43M6I8M4D9M2D18M8D10M3D28M7D37M4I21M4I46M3I9M3I22M4D21M3D10M8D24M1I178M7D5M1D24M1D11M 1831/2654 69.0% 3342/94230402 0.0% 856/2654 32.3% 77069891 NA +6019 chr4 + 190214555 112647995 112647994 112648257 263 TAGGAACCACCAC-ACTCAAACATGGAAGCACTTATTTTTGTCATGTCACAGCAAGTGCCTCCATGTTAAAGTAGAGGGGGCCCCTTAACAGATGTAAAAATACAAAATAAAGCTTAAATA--------------TATGAGCTGCGGTCAAT-----------------------------------------ACAATAAAGTTATTTT-------CTAAAAAAATAATAAAAATGTAAAAGG------------------AAGACTTACCATCACCAAAACATGGAAGCACTTACTTCTTTAGTTTCAAAGCAAGTACATCCACGTTTAAGTGGTGGGGAGCC chr4 - 94230402 35578754 35578753 35579093 58651310 58651309 58651649 340 TAGGATCCACCACCACTGAAACATGGAAGCACTTACTTTTGTAG----GCAGCAGGTACCTCCATGTTAAAGCGGAGGAAGTCCTTTGAAAATCCTTCTGAACCTTACTGTAGGTTCTGTAACTGTCTTGGTCCTTATCTGCTGCTTTCAGCCAAAAATCTCTTTGCCCAAGTCAAGTAATCTTGTGGGAAGAAAAATCAAGCAATCTTGTGGGGACCAAAATAGGAATAAAGTCGTGGACGGCATTTCAGAATTGAGAACAGGATTCACCTCTACTAAAACATGGAAGCACTTACTTTTGTAAAATCACAGAAAGCACCTCCATGTTAAAGTAAAAGGGGTCC .....x.......-...x.................:......x:----:.....:..:..............::....::.:..:..:.x.:x:x.xxx:.xx.xx.x.:x..x..xx:..--------------...xx.....xx...::-----------------------------------------.x...x...:x..:..-------.:....x.:x......:x:..::.x..------------------.:..:.:...x::..:.....................:.x..:xx...x..x...:..x....:...x....::x:...:x.. 13M1I30M4D73M14I17M41I16M7I27M18I83M 179/259 69.1% 340/94230402 0.0% 85/259 32.8% 77069241 NA +5069 chr4 + 190214555 112647996 112647995 112648077 82 AGGAACCACCAC-ACTCAAACATGGAAGCACTTATTTTTGTCATGTCACAGCAAGTGCCTCCATGTTAAAGTAGAGGGGGCCC chr4 - 94230402 35579011 35579010 35579093 58651310 58651309 58651392 83 AGGATTCACCTCTACTAAAACATGGAAGCACTTACTTTTGTAAAATCACAGAAAGCACCTCCATGTTAAAGTAAAAGGGGTCC ....x:....x.-...x.................:......x.x:......x...::................:.:....:.. 12M1I70M 68/82 82.9% 83/94230402 0.0% 1/82 1.2% 77068985 NA +6179 chr4 + 190214555 112648161 112648160 112648436 276 AAAAATGT----AAAAGGAAGACTTACCATCACCAAAACATGGAAGCACTTACTTCTTTAGTTTCAAAGCAAGTACATCCACGTTTAAGTGGTGGGGAGCCCAGTCTTGGAAA-------------------AAGTT--------------------------------------AGAATCCTTTAACCTGTAACAAGCTTAGTAACCTTA-AAACACAATAACAAAAAAATTTTGT----AACAAAA-------------------GGTGTGCTGGCTTGGAGA--------CACCTCCACTGAAACATGGAAGCACTTACTTTTGTTTCA-CACAGCAGGTACCCCCATGTTAAAGCAAAGGGGATCC chr4 - 94230402 35578737 35578736 35579093 58651310 58651309 58651666 357 AAAAATGTTTCAGACATTAGGATCCACCACCACTGAAACATGGAAGCACTTACTTTTGTAGGC----AGCAGGTACCTCCATGTTAAAGCGG-AGGAAGTCC---TTTGAAAATCCTTCTGAACCTTACTGTAGGTTCTGTAACTGTCTTGGTCCTTATCTGCTGCTTTCAGCCAAAAATCTCTTTGCC-----CAAGTCAAGTAATCTTGTGGGAAGAAAAATCAAGCAATCTTGTGGGGACCAAAATAGGAATAAAGTCGTGGACGGCATTTCAGAATTGAGAACAGGATTCACCTCTACTAAAACATGGAAGCACTTACTTTTGTAAAATCACAGAAAGCACCTCCATGTTAAAGTAAAAGGGGTCC ........----:.x.xx.:..:::....:...::....................:.x...x:----....:....x....:...x...:..-:..:..:..---:...:...-------------------.:...--------------------------------------.:....::..x:..-----....::x.....:...:-:::x.x..x..:x..:x...:....----.x.....-------------------..::.x:::.xx.x....--------......:...:........................xxx.-.....x.:.:...:...........:...:...:... 8M4I51M4D25M1D9M3D8M19I5M38I14M5D17M1I25M4I7M19I18M8I39M1I37M 194/263 73.8% 357/94230402 0.0% 107/263 40.7% 77069424 NA +6374 chr4 + 190214555 112648182 112648181 112648558 377 ACCATCACCAAAACATGGAAGCACTTACTTCTTTAGTTTCAAAGCAAGTACATCCACGTTTAAGTGGTGGGGAGCC---CAGTCTTGGAAAAAGTTAGAATCCTTTAACCTGTA------ACAAG----------------CTTAGTAACCTT--------------------AAAACACAATAAC------AAAAAAATTTTGTAACAAAAGGTGTGCTGGCTTGGAGACACCTCCACTGAAACATGGAAGCACTTACTTTTGTTTCACACAGCAGGTACCCCCATGTTAAAGCAAAGGGGA--------TCCCTTCAAATG---AGGTTAGCGTGTTCTATTTTGGAGAAGTAAATTGGATTCACTCCTACTAAAACATGGAAGCACTTACTTTTAAAGTCACAGAAAGCACTTCCATGTTAAAGTTGAAGGGAGCC chr4 - 94230402 35578120 35578119 35578530 58651873 58651872 58652283 411 ACCACAACTAAAACATGGAAGCACTTACTTTTTCAGGTGTCCAGCAAGTACCTCCATGTTAAAGTTGAGGGGGTCCTTGCCGTCTGTATTACTACTAGGATACTTAATTCTGTTCTGCATGCAAGGCTTTTATGTCCAGTGCTGAGCAGTGCTGATATATAGAAACAGGATGGAAAACAAAGTAACTTGTCTAGAGACATTGTGGTACAAACATTGTGAAGCCCCACACTC-CCTCCCCGGTAACATAGAAAC--------------CAAGAAGGATGTTCTTCAA----AAACCAAAAAGAAATTGTTCTTCTGTTCCAACATCCAGTTAAGT---TTCCAGTTGAGAAAAA------GGATTCACCATCACTAAAACATGGAAGCACTTTCTTTTCAGAACAAAGCAAGCACATCCACATTTAAGTTGTGGGGAACC ....:x..:.....................:..:..x.x:xx.........x....:...x....x.x....:x..---.x....xx:xx.xx::...:..x...x.x:....x------:....----------------..x..:.::x:.--------------------......x.:....------.:.:.x...x..xx.....x:x....xx.x.:::x.xx.-.....x.x.x.....:...:.--------------..x:x..x.x..x.::.x.----...x....::.:.--------..:x...x..::---..x.x..:---...:.x..x:..:..:------........:x::....................x.....x.::x..x..x......x....::..x......x:....:.. 76M3I35M6I5M16I12M20I13M6I39M1D21M14D19M4D13M8I12M3I8M3D16M6D80M 239/349 68.5% 411/94230402 0.0% 90/349 25.8% 77070062 NA +4875 chr4 + 190214555 112648356 112648355 112648438 83 GGAGACACCTCCACTGAAACATGGAAGCACTTACTTTT----GTTTCACACAGCAGGTACCCCCATGTTAAAGCAAAGGGGATCCCT chr4 - 94230402 35578114 35578113 35578197 58652206 58652205 58652289 84 GGAGACACCACAACTAAAACATGGAAGCACTTACTTTTTCAGGTGTC---CAGCAAGTACCTCCATGTTAAAGTTGAGGGGGTCCTT .........x.x...:......................----..x..---.....:.....:...........:x:.....:...:. 38M4I5M3D37M 69/80 86.2% 84/94230402 0.0% 7/80 8.8% 77070242 NA +7788 chr4 + 190214555 112653075 112653074 112653283 209 AGGATACTTTGGCAGCAATCTCAGAAGTTCTTTATGTTGATTTGCTAGAAGGGGATACAGAATGCCATGCTAGATTTAAAACTCCTGAGGATGCTCAAGCAGTAATAAATGCCTATACAGAAATTAACAAGAAACACTGCTGGAAACTCGAGATCCTTTCTGGTAAAACTTCATAGACGTTTCCTTTTTTTTTTGTTATCATCCTTATT chr4 - 94230402 35583698 35583697 35583906 58646497 58646496 58646705 209 AGGATGCCTTGGCAATGCTGGCTGATGTTGCTTATGTTGACATGCTAGAGGGAGACACAGAATGCCATGTCCGTTTTAATACTCCTGAGGATGCGCAGACGGTCATGAAATCTCACAAAGACCTGCAGATAAAAAACAACTGGAAATACGAAATTCTCACTGGTAAGTCTTGCTGCTTGTTTGTTGTTTTCTGTGGTTTTTTATTTATT .....:.:......:::x.xx.x..x...x:.........:x.......:..:..:.............::x.x.....x..............x..::.:..x..:..xx.::.:.x...xx.xx.x.x:...x..x:.......:x...:..:..:x.......:x...xx.:xx:....x:.x....:.x..x.x.:x.x:..... 209M 140/209 67.0% 209/94230402 0.0% 0/209 0.0% 77069377 NA +7487 chr4 + 190214555 112654060 112654059 112654183 124 TTTTTAAGGTGATCACGAACAAAGGTATTGGCAGAAGATTTTGGTTGATAGACAGGCAAAACTTAATCAGCCTCGGGAAAAGAAAAGAGGCACTGAAAAGGTAATTGATTCATTTTTGTTTTTT chr4 - 94230402 35586313 35586312 35586436 58643967 58643966 58644090 124 TTTTCAAGGTGATAATGAACAACGTTACTGGCAGAAGATTTTAGTGGACAGACAAGCTAAACTTAACCAGCCTCGAGAAAAGAAGCGGGGTACTGAAAAGGTAACGTATGTTTGTTTGCTCTTT ....:........x.:......x.x..:..............:..x..:.....:..x........:........:........:x.:..:.............:xx..x:x.x....:.:... 124M 98/124 79.0% 124/94230402 0.0% 0/124 0.0% 77067747 NA +5418 chr4 + 190214555 112657220 112657219 112657327 108 TTTAATTTTTGATTTATTTCTCTTTAGTTAATCACCAAAGCTGAAAAGATTAGACTGGCAAAGACTCAACAAGCGAGTAAACATATAAGATTTTCTGAATATGATTGA chr4 - 94230402 35592215 35592214 35592322 58638081 58638080 58638188 108 TTCAATATTTTTCATGTTTGTTTTCAGTTGATTGCCAAAGCTGAAAGAATGAGACTTGAAAAGACTCAACAGACAAGTAAACATATTCGCTTCTCTGAAGATAACTAA ..:...x...xx:x.:...x.:..:....:..::............::..x.....x.x............::.:...........xx.x..:......x..:.:.:. 108M 79/108 73.1% 108/94230402 0.0% 0/108 0.0% 77065005 NA +3204 chr4 + 190214555 112660907 112660906 112660977 71 CTCTGTCTTACAAAAAAAAAAAAAAAAAAAAAAAGACTGAAGTGGAAAAAAGATGTTCCAATTCAGTACAT chr4 - 94230402 49250037 49250036 49250107 44980296 44980295 44980366 71 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAACTACAT ..:::..:..:x.........:..........:..::x....x:......:..x.x:.x...xx.x..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 63410870 NA +7288 chr4 + 190214555 112685046 112685045 112685194 149 GCCACCAACATGGAGACTTTGTACCGTGTCCCATTCTTAGTGCTTAAATGTCCCAACCTGAAGCTGAAGAAGCCGCCCTGGCTGCACATACCATCGGCCATGACTGTGTATGCTCTGGTGACGGTATCTTACTTCCTCATCACTGGAGG chr4 - 94230402 55211928 55211927 55212076 39018327 39018326 39018475 149 GCCGCCGCCATGGAGACGCTGTTCCGGCTGCCCTTCGCCGTCCTCGAGTGCCCCAACATCAAGCTGAAGCGGCCGGGATGGGTTCACATGCCCTCTGCCATGACGGTCTACGCGCTGGTGGTGGTGTCGTACTTCCTCATCACCGGAGG ...:..:x.........x:...x...xx.x..x...x:x..x..::.:..:......x.x.........x:....xxx...x.x.....:..x..x........x..x..:..x......::...:..x..............:..... 149M 110/149 73.8% 149/94230402 0.0% 0/149 0.0% 57473118 NA +12780 chr4 + 190214555 112685270 112685269 112685485 216 CCTTTCTTGGTCTACAGGGTAAATGGACAATATATTATGGAACGACTTGCATCCAGCTTCCTGTTTACCATGGGAGGTTTAAGTTTCATAATCCTGGACCCATTGAGTGCACCAAAGATCCCCAAACTCAATAGATTTCTTCTTCTAGTCATTGGATTTGTCTGTGTCCTATTAAATTTTTTCATGGCTGGAGTATTCATGAGAATGAAACTGCCG chr4 - 94230402 55214463 55214462 55214678 39015725 39015724 39015940 216 CTTTTCTTCTCCTGTAGAGTAAATGGACCATATATAATGGAACGGCTCGCATCTAGCTTCCTGTTCACCATGGGTGGCTTAGGATTCATAATTTTGGATCGATCCAATGCACCGAATATCCCCAAGCTGAATACGTTTCTCCTGCTCTTCATTGGATTTGTCAGCGTGCTTTTGAGCTTCTTCATGGCCAGAGTTTTCATGAGGATGAAATTACCG .:......xx:..::..:..........x......x........:..:.....:...........:........x..:...:.x........::....:.x..:x.:......:..x........:..x....x:.....:..x..xx..............x.:..x..x..:.::..:........::....x........:......:.:... 216M 168/216 77.8% 216/94230402 0.0% 0/216 0.0% 57470807 NA +3157 chr4 + 190214555 112697195 112697194 112697244 50 AAAAAACAAAACAAACAAACAAAAAACATTAGCTGTTGTTGTTGTTGTTG chr4 - 94230402 54845821 54845820 54845870 39384533 39384532 39384582 50 AAAGAAAGAAACAAACAAACAAAACACTGTAGATTTTGTTGTTGTTGTTG ...:..x:................x..xx...x.x............... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 57851374 NA +3518 chr4 + 190214555 112697971 112697970 112698046 76 CAGCCTTCATCTCCTGGGTTCACGTGATTCTCCTGTCTCAGCCTTCCAAGTAGCTGGGATTATAGTCGGGTGCCAC chr4 - 94230402 18197129 18197128 18197202 76033201 76033200 76033274 74 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .....:xx.x..:.........x...x...x.xx.x.........:...........:.:..:.--..x.::.... 64M2D10M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 94500842 NA +3257 chr4 + 190214555 112700363 112700362 112700409 47 AAAAACAAAACAAAACAGACAAACAAACAAACAAAAAAATCATGGGA chr4 - 94230402 38540320 38540319 38540365 55690038 55690037 55690083 46 AAAAACAAAACAAAACAAACAAGCAAACAAA-AAAAAAATCAAGGAA .................:....:........-..........x..:. 31M1D15M 42/46 91.3% 46/94230402 0.0% 1/46 2.2% 74160043 NA +3027 chr4 + 190214555 112703528 112703527 112703573 46 AGTGAGACACTTACTTAAAAAAAAAAAAAGAAAAAAAAAAAGAAAA chr4 - 94230402 30090784 30090783 30090829 64139574 64139573 64139619 46 AATGTGACACTTTCATTAAAAAAAAGAAAGAAAAAAAAAAGGAAAA .:..x.......x.x.x........:..............:..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 82612744 NA +3510 chr4 + 190214555 112704414 112704413 112704528 115 GCTTTCTTTTTTTTTTTCTTTTCTTTCCTTTTCTTTTCTTTTCTCTT--------------------------------CTCTTCTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTCTTTTTTTCTTTCCTTTCTTTCTTTCTTTCCT chr4 - 94230402 9693689 9693688 9693835 84536568 84536567 84536714 147 GCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ..:.....xx.:.:..:..:::xx.:....:.x...x::........--------------------------------:.....:.:.:.:.....:..:......:x:...:.x.....x.:x..::........::.:.::.:. 47M32I68M 75/115 65.2% 147/94230402 0.0% 32/115 27.8% 103010725 87203830 +3135 chr4 + 190214555 112734071 112734070 112734154 84 AGCTAACAGAGATTACTTATATGATGTGGTGTGTGTGTGTGTAAAATACATATTTGCATATATACATATATATATGCATAGTAT chr4 - 94230402 46964796 46964795 46964873 47265530 47265529 47265607 78 AATTAGTAGAGATTTGTTATAATGCAAATTGTGTGTGTGTGTAGGACATAT------ATATATATATATATGTGTGTGTAATAT .::..::.......xx.....xx:::x:x..............::.:.:..------.......:......:.:..::..:... 51M6D27M 54/78 69.2% 78/94230402 0.0% 6/78 7.7% 65769275 NA +3478 chr4 + 190214555 112781075 112781074 112781148 74 CCGCAGCCTCCACCTCCTGTGCTCAAGTGATTATTGTGCCTCAGCCTACCAAGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .::.....:xx.x..:...x.:.......x..xx::x.x........x:...........:...:..x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 94583949 NA +3302 chr4 + 190214555 112782832 112782831 112782947 116 GCACTCCAGCCTGGGTGACAAGAGTGAGACTCCATCTCAAAAAAAACAAAAAACAAAAAACCAGAATAAATAGCTTTTCTTTTCTTTTTTCTTTTTGAGACGGAGTCTCACTCTGT chr4 - 94230402 49095629 49095628 49095740 45134663 45134662 45134774 112 GCACCTCACTCAACGTGCCATGTGTGAA--TTCTTTTAGAAATATCCAATAAACAAAAAATGACAATAAACATCTCATCTGTTCTTTTTTCTTTTGAGGTTTGAA--TCATTCTGT ....::..x:.x:x...x..x.x....:--.:.x.:.x:...x.xx...x..........:x.x......:.x..:x...x..............x::.x:x..:--...:..... 28M2D75M2D9M 76/112 67.9% 112/94230402 0.0% 4/112 3.6% 63687203 NA +3066 chr4 + 190214555 112785449 112785448 112785508 60 CTGCAACCGCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGG chr4 - 94230402 18197126 18197125 18197185 76033218 76033217 76033277 60 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGG ..:..:..xxx:x..:.............x...x.xx.x........:..:......... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 94588323 NA +3314 chr4 + 190214555 112804094 112804093 112804176 83 CTGCAACCTCCGCCTCCTGGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.........x::xx...x.xx.x........::..................x.:..--:....::.. 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 94606968 NA +3346 chr4 + 190214555 112810097 112810096 112810176 80 CTAAAATAAAGATATTTTAATTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681908 8681907 8681983 85548420 85548419 85548495 76 CTAAAATG--GATATCC--ATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .......:--.....::--..x.:.x:.:..x..........:...::.:.:.:...:.....x:.:............. 8M2D7M2D61M 57/76 75.0% 76/94230402 0.0% 4/76 5.3% 104128189 86086366 +3225 chr4 + 190214555 112810114 112810113 112810177 64 TAATTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTT chr4 - 94230402 92735340 92735339 92735403 1495000 1494999 1495063 64 TAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...::.:...::...x.....:...:..:.:..........x.x.x:.x.........:.x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 20074774 NA +3144 chr4 + 190214555 112810117 112810116 112810237 121 TTTTTTGTGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTGTAGCAATGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAG chr4 - 94230402 88257391 88257390 88257501 5972902 5972901 5973012 111 TTTCCAGTGTATATGTATGTATGTTCATGCATATATATTTATCTCTCTACTTAGCTTCTGTCTTTTACAGCA-----GTTTTAC-----TGACATAAATAATTTCTAACTCTTTATCCAAG ...::x........:...:...:.x:..::........x...x.:.:.x:..xx:..:.x.:....::....-----....:..-----..:.xx::x.:..:..x.....:.x.:.:x.. 72M5D7M5D32M 72/111 64.9% 111/94230402 0.0% 10/111 9.0% 24552726 NA +3199 chr4 + 190214555 112810124 112810123 112810179 56 TGTATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 20074776 NA +3282 chr4 + 190214555 112810126 112810125 112810181 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 20074778 NA +3405 chr4 + 190214555 112810128 112810127 112810182 55 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735402 1495001 1495000 1495055 55 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT .::....x.....:...:..:.:...............:.x.........:.x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 20074780 NA +3123 chr4 + 190214555 112810130 112810129 112810181 52 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .::....x.....:...:..:.:........x......:.x.........:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 20074782 NA +3493 chr4 + 190214555 112814394 112814393 112814478 85 AGTTAAATGAGATGGAAAATGACTGGAGAGCGTTTTTTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTGAG----ACAAGGTATTA chr4 - 94230402 23274701 23274700 23274789 70955614 70955613 70955702 89 AGTTAAATAAGAAAAAGAAATACTCTACAGTTTTTTTTTGTTGTTTTGTTTGTTTGTTCTTTTTAGTTTTTAGGAATTACAAGATTTTA ........:...x::.:..xx...xx.x..:x..........x...............:x...xxx.....::.----.....:.x... 74M4I11M 63/85 74.1% 89/94230402 0.0% 4/85 4.7% 89539693 NA +3027 chr4 + 190214555 112818977 112818976 112819028 52 GTTTTTTTGTTTGTTTGTTTGTTCTTTGGCTTGGTTTTTATTTTTTATTCCT chr4 - 94230402 62730653 62730652 62730704 31499699 31499698 31499750 52 GTTTTTTTGTTTGTTTGTTTGCTTTTTGCCTTTACTTCTCCATTTTTTTCCT .....................:.:....x...x::..:.x:x....x..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 50088324 NA +3306 chr4 + 190214555 112822416 112822415 112822456 41 TCAAAAAAAAAAAAAAAGAAAAACAACAACAACAAAAAACC chr4 - 94230402 75231112 75231111 75231152 18999251 18999250 18999291 41 TCAGAGAAAAAAAAAAAAAAGAACAACAACAACAAAAAACC ...:.:...........:..:.................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 37591304 NA +3079 chr4 + 190214555 112822418 112822417 112822477 60 AAAAAAAAAAAAAAAGAAAAACAACAACAACAAAAAACCATTTCAGGC--------TGGGCATAGTAG chr4 - 94230402 88022630 88022629 88022697 6207706 6207705 6207773 68 AAAAAAAAAAAAACAGAAAAACAACAATAACAACAAGCCAACACAAGACTGAAATGTGGGCAAAGCAG .............x.............:.....x..:...x:x..:.x--------......x..:.. 48M8I12M 49/60 81.7% 68/94230402 0.0% 8/60 13.3% 24799788 NA +13226 chr4 + 190214555 112823548 112823547 112823915 368 AAAGATGTAACTAA--GAGGAAA-TGCAAAAAAAAAAAAAATGCAAAGTTCAGTAAAGTGAATAGCTGCTGTACTAATTGTAAATTTCACTCTTTG------------------------------AGGTCTTGGGTGCCTTTAACCGATTCCATTTAGGCAGAAAGCACAAGCAAATATCTCTTGTTGTAAACAAAGCAACAAATTTAAGTTAATGCTAATGTGTTCACAGCCAGAGCCAAAAGTTTTTCAGGGTTATTATAACACACTGGGCTCTCAGCCCATCCATCTAAATGTCCAAAGTACACTAAAGTTATGGATTGGCCCATTGTATATACCATCCCACATGAGAGCCAGATGCTACTGTTTACTG-TGCTAGTGACTTAGCCAGATTCAATGTG chr4 - 94230402 35630927 35630926 35631315 58599088 58599087 58599476 389 AAAAAGGTAGCTGATTGAGCAGAGTGCCCGAAAGGAATAAATACCAAGTACAGC-----------TTTCTGTGCTTCTTGTTAATGGCTGTCTTTGGTCTTGTGCTGTGAACTGTTCTGTAAGCTCAGTATCTGGGTCTCTTTAATTGGTACAATTCGGCCACAAAGCATAAGCAGATATCTCATGTAGTATACAAAGCAGCAGTTTTAAGTTAATGCTGATGTGTTTACAGACTGAGCCAAAAGCTTTTTGGGGTTATTATAACGTGCTGGGCATCCAGCCCATCTATCCAAGTGTCTGAAGGAGAC--AAGTTATGGATTGATGCATTGTACAAATCGGCTCATCTGAAAGGCAGATTCTGCAATTTGTTGCTATCTGTAATTTAGTTGTATTAAGCATG ...:.x...:..:.--...x.:.-...xx:...::..x....:.x....x...:-----------:.x....:..xx....x...xx.xx......------------------------------..xx::.....x:......::.:.x.x...::.x..x......:.....:.......x...x...x........:..:x..............:.......:....x.x..........:....::.............:::......x::.........:...:..:....::...x.x..--.............::x.......:.x.:.:x.:..:x...:..x.....x..:.x:...::..-.:::x..:.:....:::x...x.:::.. 14M2I7M1I30M11D31M30I182M2D63M1I28M 253/355 71.3% 389/94230402 0.0% 47/355 13.2% 77192621 NA +3034 chr4 + 190214555 112850418 112850417 112850477 60 ACAGGGTTTAAGAGTTGTTGTTCGTTTCTTTTTTTTTTTTTTTTTTCATAGTGCCTCCAG chr4 - 94230402 3996902 3996901 3996961 90233442 90233441 90233501 60 ATAAGGTTTTAGAATTATTGCCTTTTTTTTTTTTTTTTCTTTTTGTAATGGTGTTTCAAG .:.:.....x...:..:...:::x...:..........:.....x.x..:...::..x.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 108853516 81361039 +4917 chr4 + 190214555 112862404 112862403 112862566 163 TCTTCTGTGTGAAGGCTGGACTTCATTATTTCTAGAGTGTTCCTGAACAAGGCAGATCAGAGCTTTAATTTTTGGAATGTTAACAAGGGCAGCTGTATACCAGAGTTCTAGTTGTTTTTATGAGATTTTTAAAGAAGCACAGAAAGGAAACT---------AGTGAAAAAAA chr4 - 94230402 35638764 35638763 35638921 58591482 58591481 58591639 158 TTTTCTGGATAAAGAAGACATTTGATGATTTGGGTAGTTTTCTACACCAGCACAGGTCAGAACTTTGATTTTTGACATGCTAACAAAAGCAGCTGCATTCTAAAGTCCCAGATGTTTTCAT--------------AGTGCAGAAAAAAATGTGTAAGAGGAAGTGAAAAAGA .:.....x:.:...:xx:x.:..x..x....xx:x...x...:xx.x..:x:...:.....:....:.......:x...:......::.......:..x.:.:...:.:..x......:..--------------..::......::..xx.---------.........:. 121M14D17M9I11M 102/149 68.5% 158/94230402 0.0% 23/149 15.4% 77223640 NA +3222 chr4 + 190214555 112863463 112863462 112863539 77 TTTTTGGAAATTCTTACATAATTTTGTAGAAAACATCTAACTTTAGAGTATCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 69589064 69589063 69589140 24641263 24641262 24641339 77 TTTTCAGTGAATCTGAGAAAAGTTTAAACAAAACTTCTATCTTCAGTGTGACCTTTTTTTGTTCCTTTTTTTTTTTT ....::.x:.x...x.x.x..x...:x.x.....x....x...:..x..:x.:.......x..::............ 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 43274399 NA +3097 chr4 + 190214555 112865032 112865031 112865085 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGTAGAAACCAGA chr4 - 94230402 13722720 13722719 13722773 80507630 80507629 80507683 54 AAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAATTAAA ........:.x..............::..x.:x...:.:.:........::.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99142312 91072243 +3285 chr4 + 190214555 112871243 112871242 112871334 92 TGGCACCATCTCGTCTCACTGCAATCTCCGTCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGAGGCTGGGACTATAGGCGCAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:...x.:------..:..::.:xx:x..:...........::x...x.xx.x........::....x:.....:....:.x.:.... 12M6D74M 59/86 68.6% 86/94230402 0.0% 6/86 7.0% 94674129 NA +10233 chr4 + 190214555 112888660 112888659 112888976 317 AATGCTCAAAATGACAAATCCAGCCTTTGTTTCACCAGATTATTTCAATCTGGCACTGGCACTACCACTAGCTTGGTCTGATTATAGTTAATCCACTGCC-TACAACATGACAAATGTTTTTGGTCCAAGTTGAATGGCGAAGTCTTTTCAAACAGGGAAAGCAGTTGTCAGCTGTCCTTGTTGTGGTACC-AACATGTATCATGTCAGGACAGCCAAACAAAGAAGA--GGATGATTCAG---------AATG------CTGACCCGAGTACACAGAACCTTGTTA--ACTCTGGTGGGTTTTCTGCAAGGCTTGTTAATAGTGATAGAAAAAAGAA chr4 - 94230402 35642402 35642401 35642736 58587667 58587666 58588001 335 AACTCCCACAGAGATAAATCTAGCTTTTGTTCTACCAAATTCTTTCAGCTTGGCACTGACAACACTAGTGCCCTCATCCGATTAAATCTACTTCAATGCCACGCAATATGACAAATGCTTTTGGTTTGAATTGAATGGTGAAGCTCTTGCTAACAGGAGGAACAG-TGTCAGCTGTCACTGTTTTGGTACCAAACACGCGTTGTGCTGGAGCAAGCAGACAAAAAAGGCTACACGACTTAGGGCAGATCAAATGGAAAGTCTGCTTAGGGTGCACCCAGTACTACTAAGACTTGAATGTGTTTTTATCATGACTTGTT--TAACAACAGAAAGGAGAA ..:x.:..x.:x..:.....:...:......::....:...x.....:::........:..x:..:.x.:x.:.x:..:.....x.x:..x.:..x....-::...:..........:.......:::.:........:....:::..x.x......:::.:...-...........x:....x.......-....:.::.::..:::.::..:x..:.....:...:--:x.:..:.:..---------....------...x::x.:..:...xx.::x:.::..--...:x::..x.....:xx..x.:......--..:::.:.....::.... 100M1I64M1D25M1I36M2I11M9I4M6I27M2I29M2D18M 210/314 66.9% 335/94230402 0.0% 24/314 7.6% 77246258 NA +3015 chr4 + 190214555 112891635 112891634 112891698 64 AACTGCCTCACCACTATGCCTCAGTTTCCCTGTATATAAAATAAAAATAATATTATTAATACCA chr4 - 94230402 52631618 52631617 52631681 41598722 41598721 41598785 64 AACCACTCAACATCTAAGCCTCAGTTTCCCTGCATGTACAATGAGAATGTTTTCATTAACATCA ...::.::x..xx...x...............:..:..x...:.:...:x.x.:.....:.:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 60260017 NA +5085 chr4 + 190214555 112904429 112904428 112904520 92 ATATTTTCTCTTTTTTATCCTTTTAGGTAAGTAATGAAAAGAGACATGAAGAATTGGTATTTCAAATGACCACCATGTTGCAAAAGGTACTT chr4 - 94230402 35654578 35654577 35654668 58575735 58575734 58575825 91 ATTTTTCCTTTATTTTCTTTTTGTAGGTAAGTAACTGAATGGGACACGAAGAATTGATGTTT-AAATGGCCAGCATGTTGCAAAAGGTATTT ..x...:..:.x....x.::..x...........:x:..x.:....:.........:.:...-.....:...x................:.. 62M1D29M 72/91 79.1% 91/94230402 0.0% 1/91 1.1% 77249851 NA +3068 chr4 + 190214555 112910935 112910934 112910981 47 AAGACTTTTGTTTATTATTTGCCTTTTTTTTTTTTTTTTTTTTAGAT chr4 - 94230402 12170497 12170496 12170543 82059860 82059859 82059906 47 AAAGCTTTTGTTCATCATTTCCCTTTTTTTTTTTTTTTTTGTAAAAT ..::........:..:....x...................x.x.:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 100740438 89474117 +3195 chr4 + 190214555 112915718 112915717 112915792 75 GCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTTTCAAAAAAAAAATAAATAAATAAATAAATAATAAATACAT chr4 - 94230402 17691267 17691266 17691341 76539062 76539061 76539136 75 GCACACATCCCTGTGTAACTGCGTGGGGCTTTGCTTTATGGAAAGTATAAATAGATATATATATAATAAATAGAT ....x.xxx....x.:...x.x...:.:..:..:..:.x::...:x.......:...x...x..........x.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 95224451 NA +3097 chr4 + 190214555 112921031 112921030 112921069 39 TATGTATTATTTTCTTTTTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 50117648 50117647 50117686 44112717 44112716 44112755 39 TGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTT .:.........:...:.:..................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 62803383 NA +3053 chr4 + 190214555 112931413 112931412 112931468 56 TTCAAAGATTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGGGACAGAGTCT chr4 - 94230402 60463237 60463236 60463292 33767111 33767110 33767166 56 TTTAGAGAGTTCATTTCTTGGTTTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGTCT ..:.:...x...x..::..xx..........x...............:x:.:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 52468176 NA +3216 chr4 + 190214555 112950645 112950644 112950713 69 AAAAGAAAAAAAAAAAAAAGAAAAAAAGAAAGGTTAAAAAATAAAAATACCTA-GCATGAGTGAAATAAC chr4 - 94230402 79562542 79562541 79562611 14667792 14667791 14667861 70 AAAAGAAAACAAAAAAAATGAAAGAAAGAAAGGTGAAGAGGTAGAAGCACTTGTGCATTACCTAAGTGAC .........x........x....:..........x..:.::..:..::..:.:-....x.x:x..:.:.. 53M1I16M 51/69 73.9% 70/94230402 0.0% 1/69 1.4% 33388103 NA +7347 chr4 + 190214555 112974062 112974061 112974309 248 TGAAAAACAATTTAAATTATGTATTGGAAAGAGGCCAGGAGACCCATCTGCTGGGAGTT---TGTCTTTCTAAATTGGGTGCAGTGGGTAGTGCTGAGGGGAAATGACACACCT---CTCTTATGAATATTTTCATGAACCTTCTCAGTCTCTAGAGAATCCACCCATGCACTGTTAAATTGTGTTATTTGTGGGAACACAATGACAAGGGCCTAA--ATTGGAAAGCAATACAGATTT--AGCAAGAAAATGTTTTC chr4 - 94230402 35677613 35677612 35677870 58552533 58552532 58552790 258 TAATAGACAACATGAAGTAAAGGCTGGAAAGAGGCCAGGCGCCCCATCTGCTAAAAGAGAGATGGCTTTCTAATTATGGTCGAGTAGTCACAGCCCATGGATAATAACATACCTTTTCTCTTATGAATATTTTCATGAACTTTGGCCGTCTCGGGAGATTCTCTCAGTGCTGTGCTAAATTGGGTCGTCTGTGCATATACAAAAGGGAAGGTCAAAAGATGGGTAAGTGTTCCAGTATTACAGCAAAACTGTATCTTC .:.x.:....:x.:..x..x:x::...............x.x..........:::..xx---..x........x.xx...xx...:.x:.xx..:x.x..:x...:...:....---.......................:..xx.x.....x:....x..:x:.x:...xx..:.......x..::.:....x:x.:....x::x:.:..:.x..--..x..x...::x.x...xx..--.....:.xx:.:.:... 59M3I52M3I99M2I21M2I17M 166/248 66.9% 258/94230402 0.0% 10/248 4.0% 77296449 NA +3055 chr4 + 190214555 112976483 112976482 112976561 79 GCACCCAGCCTGGTTGTGGAATTTTTAGCTAACTACTTCTCTGAGAGGCACATTCCTCATCTGCAATATGGGAATAATT chr4 - 94230402 94053865 94053864 94053943 176460 176459 176538 79 GCACCCAGGAAGGTTGTGGAATGTTTCGCTAAAATAGTCTTGCAAAGTCTTATTCTCCTTCTGTAATATGAAAATCATT ........xxx...........x...x.....xxxxx...:xx.:..x.x:....::.x....:......::...x... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 18922618 NA +6165 chr4 + 190214555 113021029 113021028 113021281 253 CATTAATTAATAAATAATAACAGCATG--GAGCATATTCTTTGGAATGC----AGTTCATGGCTTCTTGCCTGGGACAGCAGAACAGCTGTTTCTGCTAAATTACTGGAATGTGAGAAGCAGTGATGTAAACCCTTCAAAAGCACAGAGAGGGAA--GGGCTTTTTTTTCTGTCTCTTGAATTCCAATGAAAAGAAGCTTTTATACACAG----AGAATTCAGAGTGCCCTGTA--CTCTTGGAACATAACATTTCTTCTCCCTTGC chr4 - 94230402 35695364 35695363 35695615 58534788 58534787 58535039 252 CATCAATTAAGGAA----GTTAGCATGCAGATTAAACTCTCTGAGGAGTCCCTAGTTTGTGGTGATTTGACCAGCCCACTGGAAAGCTTGTTTTCACTAAAATCCTGACATTGAAGAAGCAGTGATGTAAGCCCTTCTAAAGC-CAGAGAAGAAAGGGGGACTTTTTTCCATTCCCT--------AATTAAAAGGAGCCTTTGTTCACAGAGGCAGGGTTTGGAACACACTGCAGTGTCCAGGAACATGCCATT--CTCCCCCTTGC ...:......x:..----:x:......--..x:.x.:...:..:::x.:----....::...:xx:...x.::.xx..x::...x:x:.....:::.....x.x...:x..xx:................:......x.....-......:.:..--...x:......:.xx..:..--------...x.....:...:...:.x.....----..::..::..:::.x...:.--x..:x.......:x....--:..:....... 14M4D9M2I20M4I90M1D11M2I20M8D25M4I20M2I18M2D11M 163/238 68.5% 252/94230402 0.0% 29/238 12.2% 77325665 NA +4426 chr4 + 190214555 113031654 113031653 113031765 112 TCTTTTGTTCTTTTGTTATCAGGATGGGACAGATGTAACTGCAGGGTTCAGCAGGAGGTAGCTAGGAGAAGCTTCTCATTAAACAAGAATTGAGAAATCCCATCTGAACACC chr4 - 94230402 35708086 35708085 35708197 58522206 58522205 58522317 112 TCTTTTGTTTTTCTCTTATCAGAGTGGGACAGATGGGAGCTGAGGGTTCAGCTGGAGGTAACCAGCAGAAACCTCCTGTAGTGGCAAGTCAGTAAAATCCCAGGTGATCATC .........:..:.x.......::...........x:.x:xx..........x.......:.:..x....:.:..:::.x:x:xx.::x:x.x:........xx...x..:. 112M 75/112 67.0% 112/94230402 0.0% 0/112 0.0% 77323568 NA +3415 chr4 + 190214555 113048160 113048159 113048308 149 CATTGTCTGGGAATAAGGGCAAGTGTTTAGAATAT--ACATA-TGTGCATTTGTACAAAGTATATTAGGTTCTGGTTGCATCTACAAGTGTGTATATATATATATAT--ATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681866 56681865 56682003 37548400 37548399 37548537 138 CATGCTCTGGAAA-------AAGTCTTAAAAACACGGACATAATGTAAATTTATATATACAATGTT---------TTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ...xx.....:..-------....x..x.:..:.:--.....-...:x....:..:.x.xx..:..---------..x..:x..:..x.x.x:......x:.:....--.:...:....:..xx.......x...x...x....x......... 13M7D15M2I5M1I23M9D32M2I45M 97/133 72.9% 138/94230402 0.0% 21/133 15.8% 56366294 NA +3117 chr4 + 190214555 113048237 113048236 113048304 68 TCTACAAGTGTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200260 4200259 4200327 90030076 90030075 90030143 68 TCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT .....x...:x:xx..x............:.:.:.......x......::...:xxx.......x... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 108847977 81366578 +3265 chr4 + 190214555 113048242 113048241 113048310 69 AAGTGTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCA chr4 - 94230402 4865451 4865450 4865519 89364884 89364883 89364952 69 AAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTA ....:x:x..............x.:x.x...x.x.x.:.........x..x....x..........::. 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 108182791 82031764 +3153 chr4 + 190214555 113048244 113048243 113048321 78 GTGTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAGGCGGAGTCT chr4 - 94230402 92735349 92735348 92735426 1494977 1494976 1495054 78 GCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTGGCTTCT .::.:.x.....:...:..:.:..........x....:.x.........:.x...:::.xxx.:..x.x.:..xx... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 20312895 NA +3505 chr4 + 190214555 113048245 113048244 113048300 56 TGTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::...x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 20312897 NA +3022 chr4 + 190214555 113048247 113048246 113048306 60 TGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681944 56681943 56682003 37548400 37548399 37548459 60 TATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .:...x:.:....x:.:...:....:..x:.......x...x...x....x......... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 56366303 NA +3413 chr4 + 190214555 113048247 113048246 113048302 56 TGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x.....:...:..:.:........x......:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 20312899 NA +3121 chr4 + 190214555 113048249 113048248 113048302 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 108847975 81366580 +3123 chr4 + 190214555 113048249 113048248 113048311 63 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA chr4 - 94230402 92735348 92735347 92735410 1494993 1494992 1495055 63 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAA .::....x.....:...:..:.:......x.x......:.x.........:.x...:::.x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 20312901 NA +3046 chr4 + 190214555 113060672 113060671 113060719 48 TAAAAAGCTTTTTTTTTTTTTTTTTTTTTTCCCAAATACGGTTTAAAA chr4 - 94230402 66555207 66555206 66555254 27675149 27675148 27675196 48 TAAACAGCTTTTTTTTTTTTTTTCTTCTTTCCAAAATGTCATCTAAAA ....x..................:..:.....x....::x:.:..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 46505465 NA +3269 chr4 + 190214555 113097812 113097811 113097909 98 TATAGATAAATTTTCCTCTTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGC--------ACACACACACACACGCACACACACATATATAT chr4 - 94230402 8395765 8395764 8395869 85834534 85834533 85834638 105 TACAGAAGAAAATTCCCCAGGC-CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ..:...x:..xx....:.xx.:-:..:.:...:......::.:x:::...:.x.::....:.....--------.:............:....x.....x..:x.. 22M1D43M8I32M 66/97 68.0% 105/94230402 0.0% 9/97 9.3% 104702047 85512508 +3482 chr4 + 190214555 113097830 113097829 113097901 72 TTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACAC chr4 - 94230402 14964813 14964812 14964884 79265519 79265518 79265590 72 TTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:x.:.:.x:.:...x..:.....:::::....:.:......::xx........::...:......... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 98133017 92081538 +3117 chr4 + 190214555 113097831 113097830 113097880 50 TGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACA chr4 - 94230402 48089505 48089504 48089553 46140850 46140849 46140898 49 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-TACACA ........:.:........:....x.x........:.......-.:.... 43M1D6M 42/49 85.7% 49/94230402 0.0% 1/49 2.0% 65008326 NA +3706 chr4 + 190214555 113097831 113097830 113097899 69 TGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACAC chr4 - 94230402 14964816 14964815 14964884 79265519 79265518 79265587 69 TGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x.:.:.x..:...x..:.....:::::....:........:.xx........::.....:....... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 98133015 92081540 +3079 chr4 + 190214555 113097833 113097832 113097882 50 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACA chr4 - 94230402 35554958 35554957 35555007 58675396 58675395 58675445 50 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACA ..x......x..x.........::::.:..x...............:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 77542875 NA +3327 chr4 + 190214555 113097834 113097833 113097897 64 ATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACAC chr4 - 94230402 14964821 14964820 14964884 79265519 79265518 79265582 64 ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.x......x..:.....:::::....:...:....:.xx::......::.......:..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 98133013 92081542 +3369 chr4 + 190214555 113097845 113097844 113097917 73 TGTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACACACACGCACACACAC--ATATATATGTATATAT chr4 - 94230402 4481679 4481678 4481753 89748650 89748649 89748724 75 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...:.....x.x::.:.:x....:.:...:......x...:.....:x....:..x.--.:.........:.:.. 57M2I16M 53/73 72.6% 75/94230402 0.0% 2/73 2.7% 108616166 81598389 +3131 chr4 + 190214555 113097846 113097845 113097887 42 GTGTGTGTGTGTGTGTGTGTGTATATATATGCACACACACAC chr4 - 94230402 58118595 58118594 58118636 36111767 36111766 36111808 42 GTGTACGTGTGTATGTGTGTGTATATATACGCACAGGCACAC ....::......:................:.....x:..... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 54979251 NA +3335 chr4 + 190214555 113097863 113097862 113097930 68 TGTGTATATATATGCACACACACACACACGCACACACACATATATATGT----ATATATACACACACACACA chr4 - 94230402 66904840 66904839 66904911 27325492 27325491 27325563 72 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ...x.x:.......:..::.........::.............x..x..----:.:......xx..:..:.. 49M4I19M 52/68 76.5% 72/94230402 0.0% 4/68 5.9% 46193023 NA +16498 chr4 + 190214555 113116376 113116375 113117468 1093 GCTGAGCCCAGATTATATTGTTTGTTCAC-TGACAGCTCTTTTCTA-------------------TGCTTAATGCAGCTC-CCTAATTCAGCCTCACGTGGATCTGTAAATGGTACAGTGAGGACCCGGCTACTTCTAGCCCTTCCCAGACCTGCTCACCCCTGTATTGCCACGGCAGTGGCAAGTAACTCCAACTGTGCTCCTCTTCTCCCAAAACAGCAACGTCGATTCTTTACTT--TAAATGAACCTTGGAGAAGGAAAGGGCTGTGAGATGAAAAAGGCAGG--AATTCATGTCATGTGCTACAGCAGAGCAGCCGTAGCAACGGCAGTAACAGCAGTAGCACGGCAGCAGCAGCAGCAGCAGCAGCAGAGTCCTTTAGCGAGACTGCACCATTTTCTTCTCACCCTGCATAGAGGTGTGGTTGGAAGCAGCAATAAACTACCCACCCCCTAGCAGTTTCACA----GAGGTGGCCTCTTCCTGGCTCCAGTCAGAAGACACAGTCTGTCTGGAGGAGTCCCCAAAGACTGTTCCAATT-GGTGATGTGTGTCTAAGGATGGCTTTTTCAACTAGTAGGATGCTTCTCTGCACTTGCAGCCACCCAACTG--CTGAAGAGCTGGAAGTCTAGTGCTCC-GCCTTCCCCCGGGACCATTTCTGAGTGTGGGTGCACACCTATGCCTGTGTGC-----------GTGCAGGTGTGTGCTGCTGGAGGTCTCGGTTTGGGACCTTAGTTCATTGTAGTGAGTTGTGGGTGCTGCAGAGGCTGGAGCAAGATTATGACCTAGCTCGGG-----GGCGGAGTGGATTATCTTGTGAGTGTTCTGGCTGCCAGCCATTGCCCTGGTGGGGAAAATCACATCTCCATAGAGCTCTGAAATCACCTGGATTGCTGGGGAGTGGAAACTGATCCTCTGCTACTGCTTCTGCTGATTTCCTCTGCAAAATGGCTCACGCTGCTGCTTCTATTAAAAAAGTTCGAGAGGCTGATCTGGATGAAAAGGAAAAAAATCTTGAGAGAGACAGAAAAAAACAACGGAAAATCCCCAGAGAACGTATGGAACGAAAAAGAAAGGTATGAGGAGCATCCTTTTAACCCTCTTT--CTCTGCAGC----------TCTGTGTAGCAC chr4 - 94230402 35758009 35758008 35758969 58471434 58471433 58472394 961 GCTGAGCCCTGATTACACCGCGTGTTCCCCTCCCAGCGTCCCCCTCCCCGCTGCATTGGGCTTGCTGCTTAATGCAGCGCTCCTGATGCAGCCTCACGTGGCTGCGTACA-GGCACAATGAGGGCTTGAGCATCGCCGGCTGCGCTGAGGC--------------------AGAGCAGGCGC---TGCCTGCAGGTGGGCTGCCTGCACCCAGCAGCTCTCACTCCCATTTCCTACCCGCCAGCTGGAC----GAGAAGGGATGGGTCGCCACGAAGAGAAGAGAGGGCAGTACATGCCAGGCTC-------------CCGCACC-------------------------CAGGCGCAGCGGCGGCAGCAGTA---------AGTCACACTGCACCATTTTCTTCTCGCCCTGCAGACAGGCAGTGTGAGGAGCTGCAAGGAGCTGCTCCCTCTCCGGCGGGTGTGCATGCTGAAGTGGAGCCTTCTT---CCCAGACTGGAGACGCAGCTTCTCTGAAGGAATCCCCAGAGACCTTCCCAGTTTGGTGCTTTGTGCTCAAAGGCCAATTTTTCCTCTCCAGCTAAGCTCATGTTTGCTTGCAGTCAC--AGCTGAGCTGAAGAG-------------GCTCCTGCCTGCTTGCAG--CTATTTGC-----TGGCTGCACTC---TGACTGCGAGCACTTTCACACAGTGCATGGATGTGGCTCTCGTGCCCC--------------------------TGAATTATGGGTGCTGCAGAGCCC------------TGACCTTTCCTGGGCTTTTGGAGGAGTGGATTACCGCGCCAA-GTGCTGGCTGGTGGCCAGCACCCCTGCAAAAAGACTGAC--------------------CCACCTGGAT-ACACGTGAGTGGGGGGCA--------CGACTGCTCC----------------AACATGGCTCACGCGGCCGCTTCCATTAAAAAAGTTCGAGAGTCTGAACTGGAAGAGAGGGAGAGAAACCTTGAGAAGGAAAGGAAAAGGCAGCGGAAAATCTCTAGGGCA------GATCGCAAACGCAAGGTATGGGGAAAACCTACCTCCTCCTTCTTCCCCCTGCACCCTTCCTTCTGTCTGTGTGGCAC .........x.....:.::.:x.....x.-.xx....x:::::..x-------------------.............x.-...:..x.............x.x:...x.-..:...:.....:.::.:x:.::x.::..:x:x.:x..:.--------------------.x:....xx..---.:x..x..:x..x...x.::x:x:..x:x.:.xx:x..x:.x...:::...::--:.:x..:..----.......:.x...::.:x.x:x::.:...:x...--.:.x....:..x.:x.-------------...:.x.-------------------------...xx.....:..:.......:.---------..:x.x...................:.......x.x...::xx..x:.:...x....x:.:..:.:.x.:.:.::..:.x.x::..----..:....xx:....:.---:....x.x.:....:...::.x....:....:......:....:x.:...:..-....x.x....:::..:.::x:x......xx..xxx:xx.x...:x.x.x::.......:...--.:...--........-------------.....-....x.::x.:.--.:....x:-----...x.....x.---..x...:.x..-----------.....x.x:....x:x..x.x.x:.:--------------------------...:..:..............x.:------------......xx.::...-----..x...........:.x:.:x.:-..x.......x::....x::...:x.:::::.:.x.x..--------------------:.........-:.xx.x......:::x::--------.x......:.----------------..x...........x..:.....:..................x....x.....x..:.:...:.:...:.......::..x..:....::..:.........:.:..:.x.------..x..x...x.x........:...:x.:.:x::.xx:...::..--.:.....x.----------.......:.... 29M1I16M19I15M1I29M1D40M20D11M3D53M2I9M4D34M2I16M13D7M25D23M9D86M4I16M3D53M1I63M2D5M2I8M13D5M1I12M2D8M5D11M3D11M11I26M26D24M12D14M5I23M1D39M20D10M1D18M8D10M16D111M6D44M2I9M10I12M 604/900 67.1% 961/94230402 0.0% 254/900 28.2% 77358367 NA +18307 chr4 + 190214555 113145367 113145366 113146040 674 CATTAAAATATTTAGTA--TTGTGTGAATA----AGAGACAGAGA-----AGAGGGAAATAGAAAGATTCAAAGGCATTCA-TTGAGTAATGCAAAAATTCTCATATGTAGAGACATTTTACCCAGCAGGAACTTAAGTCCATGTGTGAGGCAGGCTGCTTGCATGGTGAAAAACAAAACAACACCGCCCCCTCCCCTGCTCTCTGTCTGCCTCACCCCCCTCACTCCATTGACATGCATAGCTGGCCTGGTAGGTGTAAAAATAGACTGGCAGCGCCTGCACTGGAAATGGTCACTGAATGCAGCCTGCAGTTGCCGGGGGTTTTGAGTTCTCTCTGACACCAGCAAGCCAGCTAGCAGATGGGGAGAACTGGTGAGGGGCGTGGAAGGGAACTGAGCAGAGGAGCCAAGGATCATCTTGATGAATTGCCCACATTAGTGTACCCCTGGGAGCCCTGGACAGAGTGCAGAGGGCAAGGACGGGCCCACTGACAGCAGGAACTGTAGAGCTGAGATGGGGAATGCAGCCCTCTGCTCTTCTTGCCATGCGGATAAGAGCATAAGAGCACAAGGAAACATGCAGGAACTGGATAAAACCCCAGACTACTATGGCTGTAACAGTGAGGACGTCAAAGAACCTGGAGTGTGGGTAAGTTTTAG----GCCACAAAGGAGGAGGAAGGGAGGAT chr4 - 94230402 35784688 35784687 35785256 58445147 58445146 58445715 569 CATTCTGAAATTTAGCGCTTTATATAAACACAGTGAGGACTGAGAGCGGTAGGAAAAAATCAAAACATTCAAAGGCATGCAACTGGGTAACTCAATAACCCTCACATGTAGAGGCATTTCACACAGTGGGACTTTAACTTTATGTG-----CAGGCTGGCTGTATGCTGAGAGGCAG--------TTCCCCCACCCCAGCCC--------------------AACTCCATTTACATGCATAGCTGGCCTGGTAGGTGTAAAAATAGACAGGCAGTGCCTGAATTGGAAATGGTCACCGACTGCTGCCTGCAGTTGCT-GGGGTTTCGGGTTCTCTGTGGCA----CAGGACGGCGGGCAGAAGGG-------GTTGGGGTGCA------------GAGCACAGG-----------------------CGCACCCACTGCAGTCCCACTTGGA-----------------------------GGGGTTACTG------------GGAGAACTGCGATGGGCAATGCACCCATTTGCCACGCGTGTCACTCAGACAAGGGCATGAGGACTCCAGGGAACATACAGGACTTGGATAGAATCCCTGACTATTACGGATGCAACTGCGAAGAAAGTAAAGAACCTGAAGCCCGCGTAAGTCTTGGCTGAAGTAAACAGGAGTTGAAGGGGAAAAT ....xx:.x......::--..:.:.:..:.----:::...x....-----..::::....x:...x............x..-:..:....:x...x..::....:........:.....:..x...::...x:....x.::.....-----.......x:..:...x...:.::..:--------:x.....x....x..:.--------------------x........x....................................x.....:.....x.:.............:..x...x............:-.......:.:.......x..:..----..:.x.:..x:.....x...-------.x..:..x..:------------.....x...-----------------------:..x.x..:.:xx..x..x..x...-----------------------------...x::....------------.x...:...x......x......x..x.:...:x:x.x..:..:x.:..:...:....:..::.x.x...:.....:.....x:......:..:...x.....:..:..x..:...x.:..:..x:x:..........:..:x:.x......:..:.----:x:.x.x.....xx.:.:....::.. 17M2I11M4I11M5I31M1I64M5D26M8D17M20D95M1D23M4D20M7D11M12D9M23D25M29D10M12D157M4I26M 403/553 72.9% 569/94230402 0.0% 137/553 24.8% 77360679 NA +3013 chr4 + 190214555 113152043 113152042 113152113 71 GTGACAGAGCAAGTCTCTGTCTCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAGAAGGAAAGAAA chr4 - 94230402 91846532 91846531 91846602 2383801 2383800 2383871 71 GTAACAGGGCCACTCAGCGTGCCCCACAAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGA ..:....:..x.x..xx:..x:.xx.x..:::...:...............x:...:.........x:.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 21305511 NA +3054 chr4 + 190214555 113152059 113152058 113152121 63 CTGTCTCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAGAAGGAAAGAAAGATTACAT chr4 - 94230402 34672392 34672391 34672454 59557949 59557948 59558011 63 CTGTAACAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAAATGAGAAACACAT ....xx......:......x.:....:.........::::.::.:......x:.::.x:.... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 78479667 NA +3998 chr4 + 190214555 113156446 113156445 113156519 74 CTGCAACCTCCGCCTCCCGGGCTCAAGTGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:...:.......x...x.:x.x........::...........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 94959320 NA +6537 chr4 + 190214555 113170665 113170664 113170908 244 CTTGGGGATATAATGTGGCTCTATGAATGCACATTCCTCCCTGCCTTTCATGTCCACACTGCTGGGTGCTAAGAAAGTTGTTCTGTGTTTCTAATATTCAGATACA-AGACAACATACAGAACTGTGTCAAGAATAATTTAATGGGAAATTTTTCTTTCTTGGCCTGAGATGTCACTCCAGGGTTATAAAGGGGGCAAGTTTTAATGACATCCATCTGTTGCAGATTAAAATAGGTGGGGCTCAG chr4 - 94230402 35797357 35797356 35797592 58432811 58432810 58433046 236 CCTGAAGCTATAAGAAGTTTCTGTCAGTGTGAATTCCTGTGCTACCTTCCTTTTCACCCTGCTGTGTTTTTAGAAAGGCAGTCTGTTTTCTTAACAGTAAAAGATGTGGAAAATGTGTTGAAGTTTACTTAAAGGAATTTTAAAGGAAATATTTTTGTCTTGATATGTGGTGC--------AGTTGTAAGAAGTATT-GTTTTGATGACATCCATCTGTTGCAGATTAAAATAAGTTGGAATCAG .:..::.x.....x:x.x:...:.x.:..::x......x:x:xx.:...x.x.:...x......x..x:.x......x::x.....x..::...:.x.x.:.x.::-:..x..::.::x...x.x.:::x.:.:x.....x.x:......x...:.x.....::x..x.:..:--------:...:...:::.x::x-.....:.............................:..x..:x.... 106M1I66M8D16M1D47M 149/235 63.4% 236/94230402 0.0% 10/235 4.3% 77373308 NA +8938 chr4 + 190214555 113174374 113174373 113174532 159 TTTCATCAATAGTTCATTAAAGGTCTTTTAT-----TTTTCTCGCAGTCTGACAGCAATGCAAGCTTCCTCCGTGCTGCCAGAGCAGGCAACCTGGACAAAGTTGTGGAATATCTGAAGGGGGGCATAGACATCAATACCTGCAATCAGGTAAGAACATGGCAG chr4 - 94230402 35798816 35798815 35798979 58431424 58431423 58431587 164 TTTAAGCAGGAGCTAATTAGAGATTTTTTCTGCTTATCTTTTTACAGTCTGACAGCAATGCAAGCTTTCTCCGAGCTGCCAGGGCTGGCAATTTGGACAAAGTAGTGGAATACCTGAAAAGCGGAATAGACATTAACACATGTAATCAGGTAAGATAATTGAAG ...x.x..:x..:.x....:..:.:....x.-----.:..:.::.......................:.....x........:..x.....::..........x........:.....::.x..x........:..:..x..:............xx..x.x.. 31M5I128M 125/159 78.6% 164/94230402 0.0% 5/159 3.1% 77375558 NA +8159 chr4 + 190214555 113196356 113196355 113196506 151 TTCTTCTCTCAGAATGGACTCAACGCTCTCCATCTGGCTGCCAAGGAAGGCCACGTGGGGCTGGTGCAGGAGCTGCTGGGAAGAGGGTCCTCTGTGGATTCTGCCACTAAGGTAACATTTATGTTGGTAGAACATTTTTTTCCTTAGAAAA chr4 - 94230402 35809857 35809856 35810004 58420399 58420398 58420546 148 TTGTGCTTACAGAATGGGCTCAATGCTCTGCACCTGGCGGCTAAAGAAGGCCATGTGGGACTGGTACAAGAATTACTGGAAAGAGGGTCGGCTGTGGATTCTGCCACTAAGGTAATTTACATGTCTGT---ACATTTGTTCTCAAAAAGAA ..x.x..:x........:.....:.....x..:.....x..:..:........:.....:.....:..:..::.:....:.........xx........................:x.x:....:x..---......x..::.xx.:.:.. 128M3D20M 114/148 77.0% 148/94230402 0.0% 3/148 2.0% 77386499 NA +3161 chr4 + 190214555 113198338 113198337 113198408 71 TGGTTTTTTTTTCTTTTTGTTATTTATTTTAATCACATCATAGGTATTTTTAATCTCTTGGCCTTTATTTT chr4 - 94230402 30866191 30866190 30866261 63364142 63364141 63364212 71 TGGTTTTTTTGTTTTTTTGTTTTTTTTTTTAATAGTGTTAAGGGTATTTTCACATATTTGGTTCATATTTT ..........x.:........x...x.......x:::.:.x:........:.xx:x:....:::x...... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 82332147 NA +9996 chr4 + 190214555 113198981 113198980 113199178 198 AACATTTTCTATTTTGTTTCTCCAA--AACAGAAGGGAAATACCGCTCTTCACATTGCATCTTTGGCTGGACAAGCAGAAGTTGTCAAAGTTCTTGTTAAGGAAGGAGCCAATATTAATGCACAGTCTCAGGTATTCCATTCAGATTTTCCCTGATGTACATACATTTAAATTAGAACAGTTTTGTGAAATTGATTTAAT chr4 - 94230402 35811008 35811007 35811193 58419210 58419209 58419395 186 AACATCTTTCATTTTTCTTCTCTTTTTAACAGAAAGGGAATACCGCCCTACACATTGCATCCTTAGCAGGACAAGCTGAAGTTGTCAAAGTTTTGGTTAAGGAAGGAGCCAATATTAATGCACAGTCTCAGGTATGATACT---ATTTTCCCTTCTCTCCCAA-----AAATTA------TTTGGTGAAATTGCTTTAAT .....:..::.....x:.....:xx--.......:..:........:..x...........:..:..x........x...............:.x........................................xx:.:.---.........xx.x.x.xx.-----......------...x.........x...... 25M2I114M3D19M5D6M6D20M 154/184 83.7% 186/94230402 0.0% 16/184 8.7% 77387973 NA +7371 chr4 + 190214555 113232136 113232135 113232263 128 GTCTTTTTTTATTGCTTGTCCTCAGAATGGCTTTACTCCTTTATACATGGCTGCCCAAGAGAATCACATTGATGTTGTAAAATATTTGCTGGAAAATGGAGCTAATCAGAGCACTGCTACAGAGGTAA chr4 - 94230402 35825566 35825565 35825693 58404710 58404709 58404837 128 GTATATTCTCATATTTTCTCCCTAGAATGGTTTCACTCCATTATATATGGCAGCTCAAGAGAATCATATTGAAGTGGTGAAATATCTCCTGGAGAATGGAGCCAACCAAAGCACAGCTACTGAGGTGA ..x.x..:.:..xx:..x...::.......:..:.....x.....:.....x..:...........:.....x..x..:......:.x.....:........:..:..:.....x.....x.....:. 128M 99/128 77.3% 128/94230402 0.0% 0/128 0.0% 77406570 NA +15580 chr4 + 190214555 113236966 113236965 113237722 757 TTTTACCTTCCATTTTACCAGGATGGCTTTACTCCTCTAGCTGTGGCACTCCAGCAAGGACACAACCAGGCGGTGGCCATCCTCTTGGAGAATGACACCAAAGGGAAAGTGAGGCTGCCAGCTCTGCATATTGCCGCTAGGAAAGACGACACCAAATCTGCCGCACTTCTGCTTCAGAATGACCACAATGCTGACGTACAATCCAAGGTA------------CTTA----AAGCTGAACACATTTGTGGAAAGGAACTCTTTGGCTGCCAGACT---CCTCCTGGGGGATGATAAAGAAGTAGGCCATGGTGATAATGCAAAATTATTTCTGGTCATAAAAAGAGATAAATGACTTTC-AGAGGTATTTCAGAAAGAAGGGGACCA-----------TCTAA--AAAAATTAAATGCAAGATA---ATTTTCTTTAAAAGATGAGGTTGAGCTTTTT----------------------AGAAATCTGCTTTCTTATTCTGTTTATAGTCACAAATAATAGAATTTAAA----------------------AGATAAAATTGTATTGTGTGGTGCTTGGGGA---------TGTCTTCTTCCAGTA-------GAATGCATTTTGCCATGTTGGAACAGTATACCCAATTGCAGCGAGCAGATTGACTGTTTCCATAATTTTGCAT----TGTGTAATATCTTCCCTCTTTCTTCCAAACAACACTGCTTCAGATGATGGTGAATAGGACAACTGAGGTAC--------AGTATTGTGGTTATACCAAAATTTACCTTGTCTTTATTTTTAGTTTTTGCCCAATTGGAATAAATGCTCACTAATTCATACTAATGATTAGAAGTT chr4 - 94230402 35829201 35829200 35830009 58400394 58400393 58401202 809 TTTTGTTTTCTCCTCTTGCAGGATGGTTTCACTCCTTTAGCTGTTGCTTTGCAACAAGGACACAATCAAGCAGTGGCTATCCTGCTGGAAAATGACACCAAGGGGAAAGTGAGATTACCAGCTTTGCACATTGCTGCCAGAAAAGATGACACCAAATCAGCAGCGCTCCTACTGCAGAACGACCACAATGCCGATGTGCAGTCCAAGGTAACATGATGCTGTCCTACAGGAAACAGGGCACTCATGTGGCTGAGTGCCAATGGGCAGCCAGCTTTTGCTTCCT---------------------TCATCTTAAGGGTTAAAGGTAATTTCT-----TCGGCGGGGAAAGATGAGTCTCTAGACCAGTATCACCAGTAATGTTTCCACTTCTGCCTTGTTTAGCCACACAGTAATTACAAGCTACGCATTTTTTT----------------GCTTTTTGTTTGTATCTCTCATTTCAGTGATAACCAAACTTTCTCTTATTATTTATAAACCAAAGAAATAGGAATGGAAGCAAAATCACTGCTTCCCTATCAAATAGGATACTGGTTTATTGCCTGTGGGAAAATAGGTTGTATTTAATGTTAATGCATGCTTGAATGGCTTTTCCCA--TTATAACATCATAACTCATTTCAGAAAGCAACTTAG-----TTCTTGGTTTTGCAGCCAATCTTTAATATCTTTCCTCTTTTTCCCAAACCATGCTGCATCAGATGATGGTGAATAGGACGACTGAGGTACCGAGATCaaaaattttaattattc-----tttctattatttataattattttCTCTGCTCTGTGACAACATTTCTTTATTATTTATCACTAAAAGT--GAAGTT ....:::...:x:.:.xx........:..:......:.......x..x:.x..:...........:..:..:.....:.....x:....:...........:...........::.:......:....:.....:..:..:.....:...........x..x..:..:..:..x.....:...........:..:..:..:.........------------.:..----..:.x.::...x:x.....xx::.x:.:xx.x...x.....x:.---.:....---------------------:...xx.:.x::.xx..::.x......-----.x::x:.:..x.:....x.:..-...xxx:.x...xx.:x..x.xxx...-----------.:..:--.x.x.x...x.:....x..---.....:..----------------.......----------------------.x..x:xx:......:x.x:.:......:x.xx..:x.....:.x.x:..----------------------.:...::..xx.:x.x.:.x.:x:x....:.---------.:.:.xx.x::.:.:-------.....xx....x...--..:x....x:...x.:x...x...x:....:x..::-----.:.x.::.......x----.x.x.........:.......:.:......x.::....x.....................:..........--------.:x...x.::....x.-----...x:x..:.:.x..x..x.xx.:.:...:.x:.x:x..:.xx.x:.:.:..x..xx:.....x::.--...... 210M12I4M4I44M3I6M21D27M5D22M1I27M11I5M2I19M3I8M16D7M22I50M22I31M9I15M7I15M2D36M5D15M4I71M8I16M5D67M2D6M 475/701 67.8% 809/94230402 0.0% 164/701 23.4% 77407765 NA +8830 chr4 + 190214555 113240472 113240471 113240590 119 TTTGCTTTCATAGAGTGGTTTTACCCCTTTGCACATAGCTGCACATTACGGAAATGTCAACGTGGCAACTCTTCTTCTAAACCGGGGAGCTGCTGTGGACTTCACAGCCAGGGTATGGA chr4 - 94230402 35832007 35832006 35832125 58398278 58398277 58398396 119 TTTCCTTTTGTAGAGTGGCTTTACACCTTTGCACATAGCTGCGCATTATGGAAATGTCAATGTGGCAACACTTCTGCTAAACCGAGGAGCTGCGGTTGATTTCACAGCAAGGGTATGGA ...x....::........:.....x.................:.....:...........:........x.....x........:........x..x..:........x.......... 119M 104/119 87.4% 119/94230402 0.0% 0/119 0.0% 77408465 NA +11204 chr4 + 190214555 113242031 113242030 113242232 202 TTTGTGGCCTTTAACACAAAGGCATCGCCATCATGCCCTGTCATACCCAACA-GCTC-TTGTTTGGTCTTTCTGTGGTGTAGAATGGAATCACTCCTCTGCATGTGGCTTCCAAAAGAGGAAATACAAACATGGTGAAGCTCTTACTGGATCGAGGCGGTCAGATCGATGCCAAAACTAGGGTGAGTGTCTCTGTTCTTTCAAT chr4 - 94230402 35833200 35833199 35833402 58397001 58397000 58397203 203 TTTGTGATCCA-AACACAAATTCACCACCATTGAACACCTTCAAATCTGTCATGCTCATTATTTGTTCTTTTCATGGTGTAGAATGGAATCACCCCACTGCATGTCGCTTCCAAAAGGGGAAACACAAACATGGTGAAGCTCTTGTTGGATCGTGGAGGGCAGATCGATGCCAAAACCAGGGTGAGTGCTTCTATTCCCTGAAT ......::.:x-........xx..:.:....::x:.x.:x...x.:.::x..-....-..:....x.....:::...................:..x........x...........:.....:....................::.......x..x..x.................:..........::...:...::.x... 11M1D40M1I4M1I146M 159/201 79.1% 203/94230402 0.0% 3/201 1.5% 77408831 NA +7567 chr4 + 190214555 113249762 113249761 113249868 107 AGGATGGGTTGACACCACTTCACTGTGCTGCACGAAGTGGGCATGACCAAGTGGTGGAACTTCTGTTGGAACGGGGTGCCCCCTTGCTGGCAAGGACTAAGGTGAGT chr4 - 94230402 35842867 35842866 35842973 58387430 58387429 58387536 107 AGGATGGGCTCACACCACTCCACTGTGCTGCAAGAAGTGGACATGACCAAGTTGTGGAGCTGCTTCTGGAACGAGGTGCCCCACTGCTCGCAAGGACCAAGGTGCGT ........:.x........:............x.......:...........x.....:..x..x:.......:........x:....x........:......x.. 107M 91/107 85.0% 107/94230402 0.0% 0/107 0.0% 77406895 NA +15072 chr4 + 190214555 113255708 113255707 113255946 239 ATTATTTTGTTTTCTTTTAATGTGCAGAATGGGCTGTCTCCACTACACATGGCTGCCCAGGGAGACCACGTGGAATGTGTGAAGCACCTGTTACAGCACAAGGCACCTGTTGATGATGTCACCCTAGACTACCTGACAGCCCTCCACGTTGCTGCGCACTGTGGCCACTACCGTGTAACCAAACTCCTTTTAGACAAGAGAGCCAATCCGAACGCCAGAGCCCTGGTAAACTTGGCCCA chr4 - 94230402 35844295 35844294 35844531 58385872 58385871 58386108 237 ACTGTTCTGTTTTCTTTTACCA--CAGAATGGGCTCTCCCCACTTCACATGGCGGCCCAGGGGGACCATGTGGAATGTGTCAAACATCTCCTGCAGCACAAAGCTCCTGTGGATGATGTCACGCTGGATTACCTGACTGCCCTCCATGTGGCTGCGCACTGCGGCCACTATCGTGTCACCAAGCTCCTCCTGGACAAGAGAGCAAATCCCAATGCTCGTGCCCTGGTAAATCTGTCACA .:.:..:............x::--...........x..:.....x........x........:.....:...........x..:..:..x:.:........:..x.....x...........x..:..:........x........:..x...........:........:.....x.....:.....::.:...........x.....x..:..:x.x...........::..x.x.. 22M2D215M 193/237 81.4% 237/94230402 0.0% 2/237 0.8% 77411413 NA +30682 chr4 + 190214555 113257962 113257961 113258438 477 TAACATTATTGCCTGCAATGTGCCAGCATGGAGTTGTGTGAGAATTGTTTCTGCATGTTTTCAACTAACTTGATTGTCTTTTGCACAGAATGGTTTTACTCCACTGCACATTGCCTGCAAGAAAAACCGCATCAAAGTCATGGAACTGCTGGTGAAATATGGGGCTTCAATCCAAGCTATAACAGAGGTAGAAAAATGTTTTAGCTAGTCACAAAGCATTCCTTCTCTTACTCCTTC-----CTCCCTTTCCTTTTTCTCATCTTCTGTCCT-------CTTCACTCAAGTTTTATTTATCTGAAGAAGCCCCAAAGCCCCACCGGTGCAGAGGAGTAAAACTGCTGTTGCTTTGTTTCGCAGTCTGGCCTCACACCAATACATGTGGCTGCCTTCATGGGCCACTTGAACATTGTCCTCCTTCTGCTGCAGAACGGAGCCTCTCCAGATGTCACTAACATTGTGAGTATGGCTTGGGTCAGAATAACC chr4 - 94230402 35847275 35847274 35847760 58382643 58382642 58383128 486 TAACACTTCAGCTCCCTGTGTGCCAGCATGGAGCTACGTGGAAAGTGTAGCTGCATGTTTT-AACTAACATGACTGTCTTTTGCACAGAATGGTTTTACTCCACTGCACATTGCCTGCAAGAAAAATCGCATCAAAGTCATGGAACTCCTGGTGAAATATGGGGCTTCAATCCAGGCTATAACAGAGGTAGAAAAATGTTTCATACCCTGAAGAAACATtccttctttttctcctttttttgcttctttttttttttctc-tttcctGTCATGCCTTACCTTCGCTTATGTTT-ATTTAAACAAAGAAGCCCCTCCCCTACGCTCGTGCAGAGGAGTAAAACTGCTCTTGCTTTGTTTCGCAGTCGGGCCTCACACCAATACATGTGGCTGCATTTATGGGCCACTTGAACATAGTCCTCCTTCTGCTGCAGAATGGAGCCTCTCCCGATGTCACTAACATTGTGAGTATGGCTTTGACTAGAATCATC .....:.x:x..::x.x:...............:.::...::..x...xx...........-.......x...:....................................................:....................x..........................:..........................:.xx:xx.x.x:..:..........:..x......:-----..:.:...::........-.:.:.....x.-------....:..:.x....-.....xx::..........xxxx.:x.:.:x.....................x..................x..........................x..:.................x....................:...........x............................x.:::.....x.:. 61M1D175M5I18M1D11M7I14M1D195M 403/474 85.0% 486/94230402 0.0% 15/474 3.2% 77410687 NA +3868 chr4 + 190214555 113262302 113262301 113262384 83 CTGCAGCCTCAACCTCCTAGGCACAGGCTATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCATGCACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x..x..:..:..:x..:.:xx.:.x.xx.x........::..................--.:.........:.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 95065176 NA +8204 chr4 + 190214555 113264880 113264879 113265004 125 TCTTTGTTCCCTGGCAGCGTGGTGAGACGGCACTACACATGGCAGCCCGAGCCGGGCAGGTGGAAGTGGTCCGATGCCTCCTGAGAAATGGTGCCCTTGTTGATGCCAGAGCCAGGGTAGGTACT chr4 - 94230402 35850089 35850088 35850213 58380190 58380189 58380314 125 TTTTTACTTTTTTGCAGCGTGGAGAAACTGCACTGCACATGGCAGCACGTGCCGGACAGGTGGAAGTAGTTCGTTGTCTCCTGAGAAATGGGGCTCTAGTTGATGCCCGAGCCAGGGTAGGTGTT .:...::.:::.x.........x..:..x.....:...........x..x.....:...........:..:..x..:..............x..:..x.........x..............::. 125M 101/125 80.8% 125/94230402 0.0% 0/125 0.0% 77414791 NA +14180 chr4 + 190214555 113274418 113274417 113274670 253 CCGGCACTAACTTTTTACTTGGCTTGAGTTGTAGGAGGAACAGACACCTTTACATATTGCCTCCCGCCTGGGTAAGACAGAAATTGTCCAGCTGCTTCTACAACATATGGCTCATCCAGATGCGGCCACTACAAATGGGTACACACCACTGCACATCTCTGCCCGGGAGGGCCAGGTGGATGTGGCATCAGTCCTATTGGAAGCAGGAGCAGCCCACTCCTTAGCTACCAAGGTAAGGAGAATGACATCATGA chr4 - 94230402 35851262 35851261 35851514 58378889 58378888 58379141 253 CCTGCTCTAATCGTCTACTTGATTTGAGTTGTAGGAAGAACAGACTCCACTGCACATTGCCTCTCGCTTGGGTAAAACAGAGATTGTCCAGCTTCTGCTACAGCACATGGCCCACCCTGATGCTGCAACAACTAATGGATACACTCCACTGCACATCTCTGCCAGAGAGGGACAAGTTGATGTTGCATCAGTTCTCCTAGAGGCAGGTGCCTCACACTCCATGTCCACCAAAGTAAGATAAAATGCTTTGTGA ..x..x....::x.:......::.............:........x..x:.:..:........:...:.......:.....:...........x..x.....:..:.....:..:..x.....x..x..x..x.....:.....x..................x.:.....x..:..x.....x........:..x:.:..:.....x..xx.x......x.:x.:.....:.....:x:..xx:.x.::... 253M 193/253 76.3% 253/94230402 0.0% 0/253 0.0% 77423156 NA +7898 chr4 + 190214555 113277811 113277810 113278569 759 TTTACTTTTGTTTC-TCACATTTT-CAGAAGGGTTTTACTCCCCTGCATGTAGCAGCCAAGTATGGAAGCCTGGATGTGGCAAAACTTCTCTTGCAACGCCGTGCTGCCGCAGATTCTGCAGGGAAGGTAAAGATTTTCTATACGTTATAATTATGTAACAGTGAAGGTGATAGATTAGGAGATCTGTAAAGACATTTTTCTCACTTCTCTGAAAG-GAATGTGAGAGCAAC-TGATGAAACTATCCCAAATAGACATGGTGGCGATGTCTTC--------CATGACCGTCCAGGTACATACACACTGATTCAGAAAGCATTTTGAGCTGTGCCTCAAAGTCTTG---TCACAACAGCCCCAGAAAGTCTCTATATTAAGAAG------------AATCCCTGCAATG-TTAATGTAGTATTTCTTACATAGCAGT-TTAGACCTTTTTACATTGTGACCCTCAAGATCCCCTTTGCTGGTGGTATGCTCATTTTCAATTTTA-GTTATG--------TTTTTA------------ATATGAAAATTAT------------------TAGGGATTT----GTTTATTTTC----GTTCTTTTTTCTATTGACTA--------------TATTAATTCATTAACATGAATTTAATCAATATCAGTTTCCAGGCATCCTGGTAGCTTCAGGGCAGCTAACCCTAATTTATTAATGCTGAAACTTAAACACACCCTTTACAGAACGGCCTTACCCCGCTCCATGTTGCTGCTCATTATGACAACCAGAAGGTGGCGCTGCTGTTACTGGAGAAGGGTGCTTCCCCTCATGCCACTGCCAAGGTGAGGACCAC chr4 - 94230402 35853429 35853428 35854202 58376201 58376200 58376974 774 TTTGCTTTTGCCTCCTGACGTTTTTCAGAAGGGATTCACACCGTTGCACGTGGCGGCCAAATATGGGAGCCTGGAAGTGGCAAAGCTCCTCCTGCAGCGTCGTGCCTCTCCTGACTCAGCTGGCAAGGTA--------CTA----------------AGCAGAAAGAAACAAAAACTAGTGGTGTTTTGGG-------TTCTTACTTGGCGAAATGTGCATATAAAGGAAGCCTGCAGCCACTTTC--------ATATGGTGGTGTTAGCTTTATTAAGGTCATGCCCTCCCAAGGCTGT-CA-GTTGAGTCTGTTAGTGGTGGAGGCTGTGGTGCTGAGCACTGGGTTTAGGTTCTCTGCAGGAGGGTTATGCAGTGGGCAGCTCAGAGGGTACAGTCATTTCTGTGGCTCAAGAAATACTGATTTCATAGGAATGTCCAAACCGTAGAAATCATAAT--TCAAAAACCC-------AGGGGTAAGACCGTTTTTTGTTCTGTGCTGTGGGAACTGGTTCTCACAGGGTTGGGGGAGATGGAAACCACGCCGGTGGCCGCGTCAAGCAGGGCCGCCCAGGCTCACCCTCAGCTGCTCTTCTCCGCATTAAACAGCCGCTGCCCGTGACTTCTGGTCACTAACAT-----TAACCGCTGCCCCGCGCTCGGGGTCCCGCTGGT-------------ACCCTCCCGCACTAACGCC----CCTAACCGC---CCTTACAGAACGGCCTCACGCCCCTGCACGTGGCGGCCCATTACGACAACCAGAAGGTGGCGCTGCTGCTGCTGGAGAAGGGCGCCTCGCCCCACGCGACCGCCAAGGTGAGCTCCGC ...:......::..-.x..:....-........x..:..x..x:....:..:..:.....:.....:........x........:..:...:....:..:.....:x.:x.x..:..x..x..x......--------...----------------.:...x:.:::xx.x.:.:...x:.xx:.x.:::-------....:....xx.x:..x.-.x..:.:.::.x.:.-..xx.xx...x..--------.:.......:.x.:x...:--------....x..x:...:.xx::.-..-::...x..x.xx..::x.xx::......x:x.x:..:x:..---.:.x:x:xx.:x...:.:.x:.x.::.x.::.x..------------.:..x:.x.x:..-:.x.x.x.:..:.xx..x.....x.:.-.:x:.x.:x.xx.x..::.:.:--....:.x...-------:.x....x.x:.:....:x:..:.:-.:.:..--------..:.:.------------.x...:...::.:------------------:....x:x:----.:.:.:::..----.:....:.::x:...:.x:.--------------:x.:x:x...:......-----...:.:x.::.xxx:x.:x..x:...:.x.:.:-------------.....xx:x:.:...:..:----.:...x.:.---.:..............:..x..x..x..:..x..x..:.....:........................:.:...........:..:..x..:..:..x..:...........xx..:. 14M1I9M1I105M8D3M16D34M7D18M1I15M1I13M8D19M8I19M1D2M1D41M3I35M12I13M1I27M1I22M2D10M7D25M1I6M8I6M12I13M18I9M4I10M4I20M14I17M5D33M13D19M4D9M3D118M 432/684 63.2% 774/94230402 0.0% 165/684 24.1% 77424382 NA +13418 chr4 + 190214555 113282628 113282627 113282875 248 TGTTAATCTTACTCTATATGCATGTGTTTTATTT--TTGTTCTTTTTAGAATGGCTATACTCCGTTACATATTGCTGCCAAGAAGAATCAAATGCAGATAGCTTCCACACTCCTGAACTATGGAGCAGAGACAAACATTGTGACAAAGCAAGGAGTAACTCCACTCCATCTGGCCTCGCAGGAGGGGCACACAGATATGGTTACCTTGCTTCTGGATAAGGGAGCCAATATCCACATGTCAACTAAGGTA chr4 - 94230402 35856658 35856657 35856898 58373505 58373504 58373745 241 TATTAACGTTACTCT---------CATTTTGTTTCCTAACCCATGTTAGAATGGATACACCCCTCTACACATTGCTGCCAAGAAAAATCAGATGCAGATAGCTACCACGCTGTTGAACTATGGGGCCGAGACCAACATTTTGACCAAACAGGGAGTGACGCCACTTCATTTAGCCTCCCAGGGGGGTCACACAGACATGGTGACATTGCTTTTGGAGAAAGGATCCAATATCCATGTGGCAACAAAGGTA .:....:x.......---------::....:...--.x:::.x.x.........x..:..:..x:....:..............:.....:............x....:..x:..........:..x.....x......x....x..:..:.....:..x.....:...:.:.....x....:...x........:.....x..x......:....x..:...x..........::..x....x...... 15M9D10M2I214M 189/239 79.1% 241/94230402 0.0% 11/239 4.6% 77425970 NA +7522 chr4 + 190214555 113287592 113287591 113287711 120 ATTCTTTCTGTAGAGTGGACTCACATCCTTACACCTTGCAGCCCAGGAAGATAAAGTGAATGTTGCTGATATTCTCACCAAGCATGGAGCTGATCAGGATGCTCATACAAAGGTAAAGCA chr4 - 94230402 35858289 35858288 35858408 58371995 58371994 58372114 120 ATTCCATTTCCAGACTGGACTGACATCCTTACACCTTGCAGCTCAAGAGGATAAAGTGAACGTAGCTGAAATACTCACAAAACATGGTGCAAATCAAGATGCTCAGACAAAGGTAAATCA ....:x.:.x:...x......x....................:..:..:...........:..x.....x..x.....x..:.....x..x:....:........x...........x.. 120M 98/120 81.7% 120/94230402 0.0% 0/120 0.0% 77429303 NA +9079 chr4 + 190214555 113288251 113288250 113288509 259 TGCTAAATAATATCTTTAGTCAAATG-GAATCCTATAATAACTGATACTCTACCCAGTCCTTCTCCTCTGGGGTATTAACCAC-TAGAGTAGTAAAGTTTCTACTTTA--TCTATTTTTAACTTTTTATTATTATTTACAGCTTGGTTACACACCTTTAATTGTGGCCTGTCACTATGGAAATGTGAAAATGGTCAACTTTCTTCTGAAGCAGGGAGCAAATGTTAACGCAAAAACCAAGGTAAAGTACTTGTGGTCATTTTC chr4 - 94230402 35858376 35858375 35858626 58371777 58371776 58372027 251 TGCAAATCAAGATGCTCAGACAAAGGTAAATCATGGAATGGCTGCTTCTCT--CCAGTG----TGCCAAAGGATGCTATCATCGTAAAGGAGTA----TTCCACTGAGCTTCCAGTTTTA--TTTCTATGTTCTCTTGTAGCTTGGTTATACACCTTTAATTGTGGCCTGTCACTATGGAAACATCAAAATGGTGAATTTTCTTCTCAAGCAGGGAGCAAATGTCAATGCTAAAACAAAGGTAAAGAATTTTTCATTGCTTTC ...x..x:..x..x:.:..x....x.-:....x.:x...::...x.x....--.....x----.x.:xx:..:.::..x.xx.-..:..x....----...:...xx:--..:.x.....--...:...xx.:x:..::..........:................................::.x........x..:........x.................:..:..x.....x.........x.:..x.x:.:::.... 26M1I24M2D6M4D20M1I10M4D10M2I10M2D141M 183/247 74.1% 251/94230402 0.0% 16/247 6.5% 77429875 NA +7247 chr4 + 190214555 113292361 113292360 113292519 159 TTTTCCTCTCCCTCTGCCAATCGGGTGCTGGGCCCGCCACCACTGTCCTCCACAGAACGGCTACACGCCTTTGCACCAGGCCGCTCAGCAGGGTCACACGCACATCATCAACGTCCTGCTCCAGCATGGGGCCAAGCCCAACGCCACCACTGCGGTAAG chr4 - 94230402 35861183 35861182 35861330 58369073 58369072 58369220 148 TTTTCTTCTTTGTTTGCTTCTATGGTA-----------ACCACCATGGATTACAGAATGGGTACACTCCTCTCCACCAAGCTGCTCAACAAGGTCACACTCACATCATTAATGTCCTTCTCCAACATGGAGCTAAGCCCAATGCCATCACCACCGTAAG .....:...::x.:...:xx.xx...:-----------.....::.xxx::......:..x.....x...:.x.....:..:.....:..:........x........:..:.....x.....:.....:..:........:....:...::.x..... 27M11D121M 109/148 73.6% 148/94230402 0.0% 11/148 7.4% 77431178 NA +21850 chr4 + 190214555 113293168 113293167 113293544 377 ATTTGACAACCTTAGGGTTAAAGCGTCAAGTGCTTCTTATTAAAAAG-------AGCAAGCAGATGCAAGCTTGTTGTGTTACCATGGTGACCTGGCCTATAGTCT-GAAGAAGTTACAAAGACAGATTTAGACGTAATGGT-----AAAAACTAGTGATTTTCCTAAGCTGTGCCTTGTTTTGGAAGGAAATGCTGGCTGATGCAGAGCAGCGGGTGAGCTCATTGGCTCACATCGCAGTCCTCTCTCTTATTTCTCACTCTCTCTCTTTCACTCTCT------CTTCAGAATGGCAACACTGCCTTGGCGATTGCTAAGCGTCTGGGCTACATCTCCGTGGTCGACACCCTGAAGGTTGTGACTGAGGAGGTCACCACCACCACCACAGTGAGT chr4 - 94230402 35864003 35864002 35864396 58366007 58366006 58366400 394 ATTTGACCATCTAAGGGTTAAACCAT--ACCGCCTTTTTTAAAAAATTTAGACTAGCAGGCGGATGTATGTGTGTTGTGTTACCATGGCAACCAGAGCTATAGTCTTAAAGGGGTTGCAAAGACAGAGTCAGATGTAACAGTGAAAAAAAAAACAGTGATTTTCCTAGGCTGCGCCTTGTTTTGGATGGAAATGCTGGCTCATGCAGTGTTGAGAGTGATCTCATTGGTTCACATCACAATCctccctctcatttctctctctctctcttcccttctctttttctctTCAGAATGGTAACACTGCCTTAGCTATTGCTAGGCGTCTGGGATATATCTCAGTGGTCGATACGCTGAAGGTTGTAACGGAGGAGATTACTACCACCACAACTGTGAGT .......x.:..x.........x.:.--.x:..:.:..x.x.....x-------....:..:....:.x.:x................::...x.:x.........-:...::...:..........x.:...:....::..-----.....x:.............:....:.............x.............x......x.:x.x.:....x........:.......:..:.....:....:.......x...........:.x:.....------...........:...........:..x.......:.........x..:.....x........:..x...........:..x......:.:..:........x..x...... 26M2D19M7I52M1I35M5I132M6I111M 306/375 81.6% 394/94230402 0.0% 21/375 5.6% 77429165 NA +5059 chr4 + 190214555 113294537 113294536 113294692 156 AGGAAAAAGAAAGGAATTTTGTTCTT----CAGGCTGACAGTAAGTTCCTGTTGACATATATTGAAGT-GATGGAATACAGTTGGTTTAACGTGCAGTTTTAAGCAGAGTGGCCTATGATTTATTAATGAGCTGCAAGACACAAACTGAATTTAGATGGGA chr4 - 94230402 35865467 35865466 35865626 58364777 58364776 58364936 160 AAAAAAGGGAAAATAATTTTGATTTTGCTGCATGCTGACAGCAAGTTC-TACTGATATTAACTAAGGAAGATGGAATAAAAGCAGCCTGGCATACGGTTACAAATGGAGTGAGCCATAATTTATTAATGACCTGCAACAATGGAACTGAGTCAGGTTTGGA .::...::....:x.......x.:..----..x........:......-.::...:..xx.:.:.:.x-.........x.:x::.::.::.:.:.:...x:..:::.....:x.:..:............x......x.xxx:......:.:x:.x.x... 26M4I18M1D19M1I92M 103/155 66.5% 160/94230402 0.0% 6/155 3.9% 77429070 NA +11472 chr4 + 190214555 113302320 113302319 113302878 559 TAGTTTATATCTTTCACATTATTTACAGCTTCTTTTCTAATGGCTTTGCT-TTTAATACATTGCATATGTTCATTGTTTCTTTTTAAAGCTTTTCTGGAAACGTCACTTAGTTCATTTTAGGGAAGCTTTGAAAACATCAATCTG---CTTTCTCAATACAAC-----TAATTATTATTAATAATACCATTGCTAAAGAATTTATTTTTCAAATGAGAACTCAAAATAATGAACTGTCTCTT---------GTACAACTTCTCTGGCA---TAAATGATCATTTATCTT------CAAAAAGAACAAA-------TGAGTTTTCATGAAAGCAAATTTCCAAAATATACACGCGGGAAAGATCCCGTAGTCATGGCTCGATGGCT-----TGCTGCTGCTGTTGAGTGTGGCCTCCTATGTGATGCTTTTCATCTTTTGTTTACTTTTGGT-TTCAACTTGAACATTAATGATTTTTGTTTTTCCAGACTATTACAGAAAAACACAAACTAAATGTACCTGAGACGATGACTGAGGTTCTTGATGTTTCTGATGAAGAGGGTAAG--ACTT----------CTATTCA--ATCTTCTATGACACCTGTCATGT chr4 - 94230402 35869294 35869293 35869871 58360532 58360531 58361109 578 TAGTTTAAAAATTTCACATCATTCATAACTTCGTTTCCAAATGCTTTACTATTTAATAATTTCCATATGCCACATGCAGCTTTCTGAAACTCTTCTGTAGACATTACCTAATTCATTTTAAAATCATCTTGGAAACATTGAACTGAATTGTTCTGCATGCAGCACTTATAAATTTGCTCAGAGCTTGCTTTGCTTCCCTTTTTTTCTCTCTGATCAG--CTCA----------TTGTCTTTTATTTTGTGTGTTTTACTTTTCTGACAGAGCAAATG-----TTATCTTATACAGCACTGAGAACGGGAACTTCTGAAGTAATGATGAAAGATAAAGTTAAGGGGAT------GGGAATCATTATAAAGT---GTCTCAGCAGATCCTACTGCTGCTGCTGTTGAA------ATATTCTATGATAATATTC-TTTGCTGCTT-CTTTTGGTGTTTAATTTGAGGATTAAAGATTCT-GTCTTTGCAGACTGTAACAGAGAAGCACAAGCTAAATGTACCCGAAACAATGACTGAGGTCCTGGATGTTTCAGATGAAGAAGGTGAGCAACTTTGCTAAGTACCTATTCCGTATCACTTACGCCACCTGTAACAT .......x.xx........:...:.:.:....x....:..xx.....:..-.......xx..x......::xxx..:xx....:.:..:..:.....x.:..:.:..:..:.........:::xx:::...:......::.x...---:x....xx..:..:.-----...x.x.xx.:.:x:x.xx.x.....xxxxxx...x.:.:..x:..x..--....----------:.....:..---------..x:x....:....:..---:.....-----.......------..xx:.....:::-------x:...xx.x.......xx..xx.:x.:::x..------.....xx..:x::x...---.x...::::.x.-----...............:------x.x:.x.:....:x.x...-.:.x:..:..-........-..:..:....:x.....x....:.-..:...x......:.x.....:..:.....:...........:..:..:...........:..x........x........:...:..--....----------......x--...x::..:.x.......x.::. 50M1I94M3I15M5I49M2D4M10D9M9I17M3I6M5D7M6I13M7I32M6D17M3D12M5I16M6D19M1D10M1D8M1I24M1D88M2I4M10I7M2I23M 364/524 69.5% 578/94230402 0.0% 89/524 17.0% 77433026 NA +11673 chr4 + 190214555 113311233 113311232 113311456 224 TTCTTCCTCTGATTG-TTTCAAGGTGATGACACAATGACTGGTGATGGGGGAGAATACCTTAGGCCTGAGGACCTAAAAGAACTGGGTGATGACTCACTACCCAGCAGTCAGTTCCTGGATGGTATGAATTACCTGCGATACAGCTTGGAGGGAGGACGATCTGACAGGTATCTCATAAAACTTATAATTGATGTC-AGCCAGAAGTATGTGCAACATATTTTTTA chr4 - 94230402 35881291 35881290 35881516 58348887 58348886 58349112 226 TCCCCTCTCTGTTTGATTTAAAGGTGATGATACAATGACAGGAGATGGAGGAGAGTACCTTAGGCCAGAAGACCTCAAAGAACTAGGAGATGACTCTTTACCAAGCAGCCAGTTCTTAGATGGTATGAACTACCTGAGGTACAGCTTGGAAGGAGGGCGATCTGACAGGTATTTGCCTGGACACATATCCTTTCTCTTGTTATGAGTGTTTGCAATCCATTTCTCA .:.:::.....x...-...x..........:........x..x.....:.....:...........x..:.....x........:..x........x:....x.....:......:.:...........:......x.:...........:.....:...............:.xx:x::..x:...x::xx.x..-x.::.x:...:.x.....:x:....:.:. 15M1I180M1I29M 170/224 75.9% 226/94230402 0.0% 2/224 0.9% 77429942 NA +19061 chr4 + 190214555 113316911 113316910 113318716 1806 TTGGCAATTTGTCTTTGTGCTGGCAGGTGTGTCTGT---GTTCTGGGCTGGAGCTTAGATACAGTTTCTTGTGCT--CATGCATC--TCATCACCACGGCAACCAACACTCTG--GTGCTTCAGTCACCACACACAGGACATGCAAAGGGGACAGTGCTCTCGTTTGAAATAATAGCATTGTTGGAGTCACTAGAGACAAACAA--GAGGAACTCCA-CTTCCGCAGGAAGCATGCATCTGGCCACAGTTCATTTCACTCTGT--ACCTTCCAGGGGAATGCACCAACATTCAGTCATTCACAGTTTAGAGAGGAGGAGAAAGAGGCATAGAGAGAGAATGGAAAATAATAAGCGAAAATGAAACTGGGCTTTCATTTTGTTCTTCTCTCTGAG--GGCCATCTACTTTCCTCCTTATATTTTTCTTAGTTGCAGAGAGATTAACATTTAACACAGATTTAAGCAATCTATCCTGGAATTATTTCCTGAGTGAATTTCTGGTACTGGCAGTAATAA----ACTACAGTTGCTGGTTTCAAACATTTCTGGGAAGAAAATGAATCAGATTAGGAGTATCAAATTTTAACTTCTGGATTC-CCTTGTGCTCTTGCCATTGAGCGG--TAGGAACCTGTCAAAGGATGTGTTAGTTCAGCTGTTGGACAAAAAGGTAGGACAACAGA--------GACTTGTG---------------------TCCCCCTGGAAGTTGTGCTGT-TAGCTAATAGCACGCTTTTTT-CACTCTCCTGCTCGGCTCATCATTTTGTCATCCCAACCCTGCTACTGCTGTTGGTATAT-GCCATGGCCTCCTGCCAACCTACCAGCCTTCGATCCTTCAGTTCCGACAGGTCTCACACTCTGAGCCATGCCTCCTACCTGAGGGACAGTGCCGTGATGGATGACTCAGTTGTGATTCCCAGTCACCAGGTATGTGACATTTTGCCTTCATGTCTTTGCTTTCTGGAGAGCTTTGTAACATTATTGGATGCTAGAAATGTCCTGAGAAAGTTTTTAATCCCCCCAAAATCATTCCCAATTCAGTTGAGAAGCTAGGATAAGAGATTTGAGGGTTTTCCTAAAACATGAAAAATGTTCACTAGATTTTTTCAATGAGCAGTGTTTTTCTGAAAAAGCATACTGCTTATTTCTTCAGCTAT-----ACTGAATTCTTCTG--TGGAGATTATATATGA----ACATTATATTTTTAAAATAAAATCTCCATTAAAGGAAAAAGTGAAGTAGGATGCATTTAAGGTATAAGATGAATGGTACAGGTTAAGTTATATCTTTCAATATTTAAAATTGTTAGCTATGAGA---AAGGCTTAA-------AATTTATTCTGGAATATTTTAATTTTAGTTATGATTTT--ATCACTTTTGGTGGATTGGGTA-------TAGGGAAATA-------GATGGATACC--TACTGTCTTCAAAGA---CAATTACACGAATG--TAATCTTATATAATCTATTTAAATAATGCAGTTTAAAAGAGAATGCATTTTAAAAGATTCATTGTAAATACA-TTGGTTTTATATTTTA---AGTGTAAGTTTTTCTAGGTTATACCACTTTCCAGTGATGACACTTTTTATATTTTGTTATATTTTACT----TTAATTGAAGCAAAGTGTGTTTATTCAATCCAGTGTTCTTTGTGTTT--------AGGTGTCAACTCTAGCCAAGGAGGCAGAAAGGAATTCTTATCGCCTAAGCTGGGGCACTGAGAACTTAGACAACGTGGCTCTTTCTTCTAGTCCTATTCATTCAGGGTGAGT-------------AAATCAATATTATGTATCCTGATCAAGAGGTAAAAAGAGATGGGAGTGAAAACAACAGCTTTGTC--CAGTAGCTTTAGCTGGTGGCTAGCT chr4 - 94230402 35885450 35885449 35887140 58343263 58343262 58344953 1691 TTGTCTCTTTGGCTTTCTGCTTGTGAATACTGCAGTTAAATCTTGAGCCAGTGCTTGGAAGCAGCTTATT-TACTGCCTTGCATCCCTCATTGCTACAGCAACCAGTTTTCTGTGGAGCTGTAT------------GTACTTAATGAGAAAACAGTGCTGACATTCAGAGT----GCCTCTCTAAAGATGCTGTTGGCATACAGAGGAAGAATTTCGTCTTACACAGGA-GCTTGCGACTGGCCACAATTCACCTTGCTGTGTGTACCTTCCAGGGGACAATATCAAGCTTTACTCATTTAAAGTTTTAATGGGATTAGAGTAGATCATAACTAAGCTCTAGAAAGTA------------------------TCATTTCAGATTTCCTTCGAATTTAGCGTTCTGTTTTTCT-----TGTATTATGTAGTAGGAGAGAGAAC----TCTTCCAAAGATCC-------TTACTTAAAAGGTATTT-------GTGTTTCTTATAATTAAGGAAATAATCATGCCACAAAGCCAAGTATAAAGCATTTGTGAATATAAAGTAAAC-----------TGTTAAAATAAATCACCTAGATTAATCTCTAGGTTCTGCATTTGAGATGACTAAAAGTCAGTCAAA--ATGCTTTG---TGGTCTTTGGTCAGAAAAGTAGCTTAACAGATTTGTAAAGATTTTTGCCCCTCATGACTATTATATACTCCCCCTGGAAGCTGCATCATATTGCTAATTGCACGCTTTTTTTCATTCTCCCACTTGATCTATCATCACACCTTTGCAACATCATCTGTACTGCTCATCTATTGCTATGGCATCCTACCAACCTACCAGCCTGCGATCCTTCAGTTCAGACAGGTCTCACACACTGAGCCATGCCTCCTACCTGAGGGACAGTGCCATGATTGACGACACTGTTGTAATCCCTAGCCAGCAGGTAAGC-ACATT---------------------------------------------------------------------CTTTTAAC-------------TTCACACTTCAGTTGGGCAAATATG----GAAAT-----------------ACACAAAAA----TTACTA-----TTTAAA---------TTGTACTGAGAACATATAGTGTGTACTGCTTTATCTATTGTAATATAAATCTCTTTAATTGCAGTTGATATTTAATGGCATGTTATACTATGCAATATTAAACTCTACT-----CCAAAATAAATTACTATGCTGTATGAATATAGGACAAATA---------CAGTAATGTTCTCCATTTTACCATACTAATAGCCATTGGGCCCAATGGTTAAGTGATGTGATGAACTCAAAGCCACTGTCCTCCAAGTTATTATCCTGAAGCAAACCTGTAAGTTCAGAAAAAATAATTCAGGAAATGCCACTTTGATAAATCACAGTATTTATTTCAGTGGGACCACTAACAGAAATGATTACTTTGGGCAAGTGTA---AAATGTTATAGT---------AAGGGGTTTTGAACATTGTTTTGCTACTATAGTTTGTTTTCTTTTGAAAAGAATTCAAGCACTG-TAGGTAATACTA-TGCAAAGTG----CACCTTCT-TATTGTTTCATTGATTAATTGAGTTAATTGTAGTAAA--------AACCAA-CAACTTTTTTTTTTGTTTGTTTACCAAGGTAACTACTCTGGCCAAAGAAGCAGAAAGGAATTCATATCGCTTAAGCTGGGGGCCTGAAAACTTGGACAATGTGGCTCTTTCTTCCAGCCCTATTCACTCAGGGTAAGTTAGCATTGTCTTAAAATTTAAATTaaaaaaaaaaaaaaagaaagaaagaaagggagaaagaaaCAGAATACCTGTAACGGCAGTAGTTTTAACAGATTCTTAACT ...x.xx....x....x....x.::::.::xx.x..---:.::..:..::.x....:..x:...:..x..-.:..--.x......--....::.:..:.......::x:....--.x...x:.x------------.x..x.:xx:..:::........xx.:..:::.:.----..x.:x:.::..x::..:xx.:..x...:--..:...:.:.:-...x.:.....-..x...:x.........:....::.::..x...--.............xx::.:...xx..:.x.....:.x.....x:.x:...xx...:x:::x....:xx.::xxx.:....:..------------------------......::xx:...::..x:.x--:..xx...::...:..-----.:.x..x:x....x.x.......x:----.:.xx..x....::-------:..:::x::.:x.....-------.x:.....x:..x.x:x:.x.....----:.:...:xxx.x:..x.x..:.....x..::x.x...:.:..:-----------.:.:...x.xx.x.x:..:....x-:..:xx.x.::...xx.....xx.--..::.::.x......--...:x..:---::.::x....x..:...:....xx:......--------..:..x..---------------------............:..:::::.-.x......x............-..:.....::..:.::::.....:x:::.x.:x....x:::::xx.:...:.x:.x...-..:.....x....:...............x..............x..............x.................................:....x..:...x.x.....:..:..:..:..x......x.:-.....---------------------------------------------------------------------:......:-------------...x..x........:.x.:x..x.----..:..-----------------...::....----.:....-----...x..---------..x.x....:..x::...x..:x..:.x...:.x....-----xx.:...:::.:.:--..x..x.x....x.:.----.::.....:.x.xx..xxxx..x...:.:.-----xx...:.:..x..xx....xx.xx:::....:..::...:---------x...x..:.::.:..x.x.x:x.x.:.:x....:..x:.:---..x.x....-------:..xx.:..x:::x:.:.x.xx.::x......x..::.--.x..xx::..xx:.x.::.:x.-------.x:......:-------...::..xx.--..:.xx:....:x.:---..x.x...x:....--..x.:.x:xxx.:.x..---....:x.::...---------..x.x:....:..x:x.x:x...:x.x..:.-..x.....x.x..xx.---.:.x:...:x:.x-.....x....:.-.x:xx....----...:..:.-....x.x.:..xxx...x.----.......x..:...--------.x:...-.x.x.x..:...x.....--------....:x.x.....:.....:..:..............x......:..........xx....:.....:.....:..............:..:........:.......:...-------------....:x.x....x:x.xxxx:.xx....::x...:.:..:x:.:.:x:..x.x..:.x..x.:x.--......:....:.x.:.xx:..:.. 36M3I31M1D4M2I8M2I26M2I9M12D35M4D29M2I11M1I11M1D33M2I83M24D22M2I16M5D25M4D14M7D17M7D25M4I43M11D24M1I24M2I15M2D8M3D31M8I8M21I21M1I21M1I59M1I135M1D5M69D8M13D25M4D5M17D9M4D6M5D6M9D38M5I14M2I16M4I30M5D40M9D40M3I9M7I38M2I22M7I10M7I10M2I15M3I14M2I17M3D12M9D31M1I16M3I13M1D12M1D9M4D8M1D19M4I14M8D6M1D18M8I112M13I65M2I25M 1012/1561 64.8% 1691/94230402 0.0% 375/1561 24.0% 77431461 NA +8642 chr4 + 190214555 113323699 113323698 113323923 225 CTTCCTTATATTTCACTTTAT---CCGTTCCTTCTCTGTGCTAAAGTATCTATTCTGTTGCAGCCGCGCCTCTCCATGTCTTGAACGTGACAACAGCAGGTGAACTACTGCATAATTCTTTCTCTGAACATGTTGCCTATTCCTCTCCCCCTTTCGCCA----TCTCCTTCTGCATATTCCTTGCCTCAGGATGCTTTAGTGTGAAGATA------CCTAGCCAAAGAGATAGAAAGA chr4 - 94230402 35891380 35891379 35891606 58338797 58338796 58339023 227 CTCATTTATTTTTCCTTTTCTTTTCTTTACTTTCTTGATGTTAAATCATCTATTCTGTTGCAGATGCTCTTCTCCATGTCTTGATCATGACAACAGCAGGTGAACTTCTGCATAATTTCTTTCTTTAATATGTTGC----------ACCTCTTTTGCCATATTTATCCTTCT-CTCTTACCTCACTTCAGGCTGCTTTAGTGTTTTGATAGTGCACATTAGCCAAGAGGAAAAAAAAA ..:x:....x....x:...x.---.:x.x.:....:x:..:....x:................x:..x.:..............x.:...................x..........::..:::.x..:.......----------x..:....:....----.x.......-.x:x.x...::.:.....x...........xxx....------x:.......:::..x.:...:. 21M3I112M10D13M4I9M1D37M6I22M 160/214 74.8% 227/94230402 0.0% 24/214 11.2% 77432319 NA +17246 chr4 + 190214555 113330219 113330218 113330477 259 TATCTAATCTTCTATTTTAATTTTT-AGTTTCCTGGTTAGTTTTATGGTGGATGCCCGAGGTGGTGCTATGCGAGGATGCAGACACAATGGGCTCCGAATCATTATTCCACCTCGGAAATGTACTGCTCCAACGCGAGTCACCTGCCGACTGGTCAAGCGCCACAGACTGGCAACAATGCCTCCAATGGTGGAAGGAGAAGGCCTGGCCAGTCGCCTGATCGAAGTTGGACCTTCTGGTGCTCAGTTCCTTGGGTAAGGG chr4 - 94230402 35898742 35898741 35899001 58331402 58331401 58331661 260 TATCTAATAATTTTTCCTGATTTTTCAGCTTCCTAGTTAGTTTCATGGTGGATGCTCGTGGGGGTGCCATGAGAGGCTGCAGACATAACGGACTGCGGATTATTATTCCTCCACGGAAATGCACTGCTCCAACACGAGTGACTTGCCGCTTGGTGAAACGTCACAGACTGGCCACCATGCCTCCCATGGTGGAAGGAGAAGGCCTGGCCAGCCGTCTGATCGAAGTGGGACCATCTGGGGCCCAGTTTCTTGGGTAAGGG ........xx.:.x.::.:......-..:.....:........:...........:..x..x.....:...x....x........:..:..:..x..:..:........x..x........:...........:.....x..:.....x:....x..:..:...........x..x........x..........................:..:...........x.....x.....x..:.....:............ 25M1I234M 216/259 83.4% 260/94230402 0.0% 1/259 0.4% 77431477 NA +39123 chr4 + 190214555 113331841 113331840 113333211 1371 GGGCAGAACCAAACGCAGTGTGAAACCAAAGTTCACCCTGTGGATCAGCTGGCGACGCTGGGGTTCTGTGGAAGACAATACCTGAAGCTTACCTATGTTCTTTCTTTCACTGCTGCTTTGGATGTACTCAGTAAACTTCACCTGCCAACGGCTCCTCCCCCACTTAATGAGGGAGAAAGTTTGGTCAGCCGCATTCTTCAGCTGGGGCCTCCTGGAACCAAATTCCTTGGGTAGGAGTGACTTAAAACAAATTGATGGCTGCTGGCC-CCCCATTCTTCTCCTTCTTCTGCAATATGATTTCTCTTTTTTGTCATTGTGCCCATGACA-TGTCCCTTTCTATGATTT-AAATTCTGTATAACCTATCTTTAGTGGACCATTTCTGACCCTTGTGGTATGTGACTTTTATTTTTGAGTGATGTTTTTATATCTTTCCCCTTAAAGTGCTGTGACCTTCATTTTCGTTTAAGCATGAGATCTGCCTAGTTGTACTATGTGCTAGTTATGATGTTGTTATGATGAATTTGGAGTCTGTATCAAAGCAACCTGGAC-----CCAAAAATCAAAACCCTCTACATATTT---------------------TGAGAACGAATGTGACCTA------------AAAATAATAGGGCAGTGCATGTTCCGGATCCTGAATATAATAGGCATTGGACACAATTGGGCTGTCTGCTGAGGGG----------------------------CTCAATTAGGGCCACAC--------------------------------TGTGTACACATGCCTAT-TGTTTCCTTGAATG---------AAGAAAATATAAGCA-----------------------------------AAAACCA--CGAGTGCATGGCTCTTTAGTTCACAAGTAG---------TCAACTT-TCTGACATCTCCTCATT---------TACGA---CACATCAAATTA--TGCAATGTGT--------------------------GAGCCATTTTCCTCTTAA--ACCATTTCGTCATTTTG---CACCTTGTCGAAAATGTTTTAGGAGATTGGCAGACATCATAGATATGCAT----GTACATTTCTTTTGGTTAAATGTGTTCTACTTACATTTATCAAAGGAGAAGTTCCA--------------GAATGTCACATGCACTCACAGGGAAACATT---ATTTGGCTTAAGGT--AGCAGCATGTAC-CTGAGGATTGGTGCCCCTGAGGTGGAGTGCTACTGTGTGACCATCTGCTAGC---CAGTGGGCTCCAGGGGATGGCCCACTATGTCCCT------------------------------GTCCCCAGCAAAAGAAGAATTCCAGGTCACTTTGCAACAGAGTCGA-------GGTGCTTGTCTTGCTGTTAGTTAGCTCCTGTCCACACTGAATGTTCTGCATTGCTATGTCAGGCCTGTGATCGTGGAGATCCCTCACTTTGCGGCCCTTCGAGGAAAGGAAAGGGAACTGGTGGTCCTGCGCAGTGAGAATGGGGACAGCTGGAAAGAGCATTTCTGTGACTACACTGAAGATGAATTGAATGAAATTCTTAACGGCATGGATGAAGGTA chr4 - 94230402 35900558 35900557 35902130 58328273 58328272 58329845 1573 GGATGGAACCTTATTCAGTGTACAGCCTAATTCCACTCTGTGGATCAGACAGTGGCACTGGCATTCTGGCAAAAAAAATACATAAAGTTTATTTATGTTCTTTCTTTCACTGCTGCTTTGGATGTACTCAGTAAACTTCATCTGCCTACGGCTCCTCCCCCACTTAATGAGGGAGAAAGCTTGGTCAGCCGAATCCTTCAGCTGGGGCCTCCTGGGACCAAATTCCTTGGGTAGGACAGACTTGAAACAAATTGATGGATGCTGACCTCCCCATTCTTCTCCTCCTTCTGCAATATGATTTTTTTTTTGTGTCATTGTGCACATGATATTGTCCCTTTCTATGATTTGAAATTTTGTATACCCAACCCTTAGTGGACCATTTTCAACCCTTGTGGTATGTGG-TTTTGTTTT--AGTGGTATGTTTGTATCTTT-TTCTTAAAGTATTGTGGCCTTCATTTTTGTTTTGGCATGAGATCTTCCTAGT-----TATGTGC-------------------------TTGATGTCTGTAGCAAAGCAACCTGGATTGTGACCAAGAAAAAGAATCTACTGTAAATTTAAGATTTTTTTTTTCAAGTACTGAGGAGTAAGAT-ACCTGTTAGATACCACCAGTGTAATAGAACA---CATGACATTTACTATGTATATGGTAACCTGTG--------TGGGTATTCTAATTAGAGAAatgtatatacaaatatatttatattttctctcttatttccacaagtatgtatttttatgtgcttataaatatattgtatgtacacatgtgtgtatatttacttgtatgtgtgtgtttatatatatatatgcacacatatattgatacctatatTGACACCTGCTTGTAAGACAAGGCAAATTCTTATCTCCT--ATACGTAAATAGAAACCTAGATTATCTTCTCAGACATCCCTTTTCTCTCCCAGAGTGCAAATCCAGAATAAATTCATTGGAATATATAGAACAACTAAATATAATTGGCACAGGACACAATTGCCCACTGATTGCAATGAAGTTATTCTGATTTGCACTAGTATAAGTGAGATCAGAATTTGTC--CCACTATTGGTATGCATTACAGTAGATTCTCTTTG---AAATGAAGT-TGCACAGGTTAACCCAGACAGTAGTGACAACTAAAATGAGCATGAGTTTTCAATGAATTTGCAAAACAATTCTCAAATTTCTCTTTAAGCCAAATACCATTCACACTGTGGA---------AAGAGGT-GAATGCACTTTTGAATCTGTCCTTCAGCATTTACTGGGTCCCTGTGAA-AATCTAATGTGTTAGTGATGTACTAGTTTAGGATTATGCAAAAGTAGTCCAGAGAATAGGTAGAATTCCAGGTCACTTTGTAGCAGACTGAATAGAGTTGCTGTTAATCCTGTTTCTTCCTCTCTCCCGTGTGCATTTAATGCGCTGTGTTGCTGTGCCAGGCCTGTGATTGTGGAGATTCCCCATTTTGCTGCTCTGCGTGGGAAAGAGAGAGAACTGGTGATCCTGCGCAGTGAGAACGGGGACAGCTGGAAGGAACATTTCTGCGAATACACTGAGGATGAACTAAATGAAATCTTGAATGGGATGGATGAAGGTA ..:::.....xx.:x......:x.:..x..x.:...:...........x::.:.:.:....x:.....xx:..:.x.....x.:...:...::...............................................:.....x................................:...........x..:....................:....................xx.....:..............x.....:..-...............:.................:.:....x...........x.....:.-..................-.....:......x..x.:.:..............:::................:-....:....--....:.:.x...:.......-::........::....:..........:....x:...........x......-----.......-------------------------...:x.......x..............:-----....:..xx.:..:.:x..::.x....---------------------....:.xx..x:.-....:------------.:x:......::..---....x:x:xx.::x..x....::..:x.xx..--------....:xx...:x.x..:.:----------------------------...xx...xxx.....x--------------------------------.:..........:x.:.-.:...x....x...---------.x:x.x.....x...-----------------------------------..:..x.--.:.:.x.x.:x...:.--:.x.::..:...---------.:.x...-..x......:.:.:x:.---------.:.:.---..x.x:.....x--..x...:.:.--------------------------..xx..x..x..:x:.:.--:.x..xxx..:...:..---::.x:.:x::x..:..xxx.x:..:x...x.--x..::..x.:.......----...x...:::....---.....x:x.-.:.x:.x:..x.:.x.::x..x...xx..--------------..:.x.:xx...x.:.::..:::x..:x:.---....xx...x.:.:--.::.x...x:..-...x...---------xx.....-..:...xx:.x..x:x.::..:x::...---:.x....::..x.x.:.-:::.:.x.:...:xx.------------------------------....xx..x.x.:.x...................:.:....x.x:.-------.x..:.x:..:..:.x:.xx:.xx....:..x::..:.x....:x...::.....:..:............:........:..:..:.....x..:..x..x..:..:..:..:.........:................:..............:..:........:..x........:......:.:........::.x..:..x............. 267M1I60M1I18M1I54M1D9M2D20M1D52M5D7M25D28M5I27M21I13M1D5M12I14M3D32M8D19M28I17M32I17M1I14M9I15M35I7M2I16M2D12M9I7M1I17M9I5M3I12M2I10M26I18M2I17M3I31M2D17M4I14M3D9M1D29M14I30M3I14M2I12M1I7M9D7M1D28M3I17M1D16M30I46M7I220M 956/1306 73.2% 1573/94230402 0.0% 332/1306 25.4% 77431283 NA +22845 chr4 + 190214555 113335833 113335832 113336787 955 TTTCTTGTCTTAGTACTGGATAGCCCAGAAGACCTAGAAAAGAAACGAATCTGCCGCATCATCACCCGAGACTTCCCACAGTACTTTGCAGTGGTGTCTCGTATCAAACAGGACAGCAATCTGATTGGCCCAGAAGGAGGTGTACTGAGCAGCACAGTGGTGCCCCAGGTGCAGGCCGTCTTCCCAGAGGGGGCACTCACCAAGCGGATCCGCGTAGGCCTGCAGGTA---------------------------------------------------------------TGCCCATGTTA----GATGCA-------------AATGATCCTAACAGGATTGTATTCTAATGATTAA---AAATT----AGCTTTG-----TCAAG--------GACTGTTACCTT-----TGTTT-TATAATC---------ACACCA---------------AAAAGGAAGGTAGC-----------------------------ATTAATGGTAAAGCTAAAGTCAAAATCCATATTTATTGGTTACTAATCTA---------TTTAAAAATTCAACTTATATTTGGACAATTAACCAAAATTAATCTCCAGCTACAAATGTTTTCTTCTTGTAAAAAAAAAAAAAAGAAATTAG-----------CTTTTAAATGAGAAATAAATT-------GTTAAA-GAATCAGATTATTCCTAGTAAGCAAGAGCTGCCATCAGAGATCGTGGATCTTACAAAATTTTATGAGTGCTTAGTAATAA--TACTGAACTTATGATTGCC----------ATATTTGAAGCCCACCAAACTTATTTGTAAGATAAAAAATAC---TTTGGGGAAGAAATTTGAAATT-----AAGTATAATGATTCATT----------CTTTATTTTAAAATATATACACAAATATATATGTGTGTGTTTTTACTTTGAAAAGGCTCAACCTATGCACAGTGAGCTGGTTAAGAAGATCCTAGGCAACAAAGCTACCTTCAGCCCTATAGTCACTTTGGAACCTAGAAGAAGAAAATTCCACAAACCAATTACCATGACCATTCCTGTCCCCAAAGCTTCAAGTGATGTCATGTTGAATGGTTTTGGGGGAGATGCACCAACCTTAAGATTACTATGCAGCATAACAGGTGAGT chr4 - 94230402 35902972 35902971 35904100 58326303 58326302 58327431 1129 TCTTTTGCCTCAGTACTTGACACACCAGAAGAGCTTGAGAAGAAACGTATCTGCCGCATCATCACTCGTGATTTCCCTCAGTACTTTGCAGTGGTGTCCCGAATCAAACAGGACAGCAACCTTATTGGACCTGAGGGAGGTGTGCTGAGCAGCACTGTTGTACCACAAGTGCAGGCAGTCTTCCCAGAAGGGGCTTTAACCAAACGAATTCGTGTTGGCCTCCAGGTACAATGAAACAATTAGAAGGATATATATGTTGTTTTCTTTTTTTTCAGATTGTGAAGACACCTTTGTACAGATTATTGTGTTGTACACTGCTGCCTATAATGTTCTTACTAAAATT-CATTGCGACAATCAAAGTAAGTTAGAAAGATTTGGGTATTCCAGTTCATGCAGATTCTTGGCTTTTAGCTGTCTATATGATCTCAGAAGATACACCAAATTTTTCACTACTGAAAGGGGAGGAGGTCCCCGCTGCTCCCCTCATCTTCGTCCTTGCTTCCTGCTGAAGCTGTTGATTGGATCCACCATTTTCCTTTGTCAAGCTACTGTGATTGTTGAGATCTTCTGTAAAAAGCTGAGTAGCTTACTAAAA--------CAGTTTAGAG---TTTGTCCTCAGAAGAAAAAAAAAAAGAAAACAAACCAAAACAACCTAACAACAGGGGAATCATTTACTATTGGTTAAATGCATTAAATTGGTACTGATGAGAA--------CACTAGGAAAGGTGG----TAGGAA----CAGCAGCGAAGAGTAAGAAATTGTTGAATAGAGGACTCCCCTTCTCTCTGACAGTTGTTAGCCTGCAGATTT-----CATGAGAAACGGTGCCATCTAATGGAACAGCTATAACATTTCTAGCAATATACAGACCCAGTTCCTCACATACTCTGTTTTCAAGT-----TACTATTCTTACTGT-----TTTTCGCTTTGAAAAGGCTCAACCTATGCATACTGAACTTATAAAGAAGATTTTGGGCAACAAGGCTACCTTCAGTCCTATAGTCACACTGGAGCCCAGGAGGAGGAAGTTCCATAAACCCATTACAATGACAATTCCTGTCCCCAAGGCCTCCAGTGATGGGATCATGAATGGTTATGGAGGTGACACACCCACTTTAAGGTTACTATGCAGCATAACAGGTAGGT .:.:...:..:......x..:.xx........x..x..:........x.................:..x..:.....x....................:..x.................:..x.....x..x..:........:...........x..x..:..x..:........x...........:.....x:.x.....:..:..:..:..x.....x......---------------------------------------------------------------..:x..x:...----.x..:.-------------....x..:..x:.::...-:...x::.::..:..---..:..----..x....-----..x..--------..:.x..:x...-----...:.-...:...---------......---------------...:..:...x:.:-----------------------------x..xx..x.:.....:xx.x:x::.....:xx..x.:xx..:::..x...---------..x.:.xx...x::xx.x.x:..:::.::.x..:....--------...:.xx:.:---...x.:..::x..:...............x:.:-----------..xx:..xx.:.:...x.x..-------......-.x..:.:...:x.x..::.:..x.--------..::..::.xx....----..x:..----:.xx..:.xxx.....x..--.::....:xx.x..:.x..----------.:.x...xx:x..xx..:.:..-----:.x..x...x::.:.---:.x:x....x.:x.x.:.x...-----x.:....xx..::..x.----------..:.:....x..:.-----:..x.x.x.xxx...-----....::........................:.x...:..x:.x........::.:........:...........:...........x:....:..:..:..:..:..:.....:.....x.....x.....x..............:..:..x.......xx..xx.........x...:..x..::....x..:.....:.....................::.. 228M63I11M4I6M13I18M1D15M3I5M4I7M5I5M8I12M5I5M1I7M9I6M15I14M29I50M9I38M8D10M3D33M11I21M7I6M1I24M8D15M4D6M4D19M2I19M10I22M5D15M3I22M5I17M10I14M5D15M5D227M 652/912 71.5% 1129/94230402 0.0% 260/912 28.5% 77432861 NA +9634 chr4 + 190214555 113339187 113339186 113339406 220 AGTTTTGCCTGATTTT-----TTTCAACAATCA-TATTATTTCAGGTGGAACCACCCCTGCCCAGTGGGAAGATATTACAGGAACTACGCCATTAACATTTGTCAATGAATGTGTTTCCTTTACAACAAACGTGTCTGCCAGGTATCGTTATATAGCACAGAAAAGCCCACTATGATATGTTACCCTCCAAAAAAACTGCCCTTTGTTT----TATTTTGTTTCTTTATT chr4 - 94230402 35905859 35905858 35906075 58324328 58324327 58324544 217 AGACTTGCCTGTTTTTCGTTCTTTTAAAAATCACTGTCATTTCAGGAGGAACCACCCCTGCCCAATGGGAAGACATCACTGGAACAACACCATTGACGTTTGTTAATGAATGTGTTTCCTTCACAACAAATGTGTCTGCCAGGTACC-----------TATAAAAACAAGATTTACAATGTTA--CTTTAAAGTGCATGTCCTTTTTCTTCTGTATTTTGTTTTAGTATT ..x:.......x....-----...:..x.....-.:.:........x.................:........:..:..x.....x..:.....:..:.....:.................:........:..............:.-----------:.x....:.xx:x.x.:xx......--..::...:x:xx..:.....x.:.----..........:xx.... 16M5I12M1I113M11D25M2D24M4I17M 163/207 78.7% 217/94230402 0.0% 23/207 11.1% 77433328 NA +17861 chr4 + 190214555 113341611 113341610 113341930 320 CATATTGAAGGAACTG--ATTTTATTTTTCACATGGTATACTTTGAACTTTAGATAACTGA---CTTTATTTATTTTAATAGGTTCTGGCTGATAGATTGTCGACAGATCCAGGAATCCGTTACTTTTGCATCACAAGTATACAGAGAAATTATCTGCGTACCTTATATGGCCAAATTTGTAGTGTTTGCCAAATCACATGACCCCATTGAAGCCAGGTTGAGGTGTTTCTGCATGACTGATGATAAAGTGGATAAGACCCTTGAACAACAAGAAAATTTTGCTGAGGTGGCCAGAAGCAGGGATGTGGAGGTACTGTACCAAAA chr4 - 94230402 35909569 35909568 35909886 58320517 58320516 58320834 318 CACAATGGAAAAATTATAATTTTATTGTTTAAAT------CTTTCTGTGTT-GATTACTCAACTCTTCATTTTATTTTACAGATTTTGGTTAATTGACTGCCGACAGACACAAGAATCTGTTACTTTTGCTTCTCAAGTGTATAGAGAGATTATCTGTGTCCCCTACATGGCCAAATTTGTGGTGTTTGCCAAATCACATGATCCCATTGAAGCACGGTTAAGATGTTTTTGCATGACAGACGACAAGGTGGATAAAACTCTAGAACAACAAGAAAATTTTGCTGAAGTTGCCAGAAGCAGGGATGTTGAGGTACTGTACAAGAA ..:.x..:.::..:.:--........x..:.x..------....xx::x..-...x...x.---...:....xx...x.:..:..:...:.:..x..:..:.......:x..:.....:...........x..x.....:..:.....:........:..x..:..:..............:....................:...........xx....:..:.....:........x..:..:..:........:..:..x.......................:..x.................x............x.:.. 16M2I16M6D11M1D9M3I261M 252/313 80.5% 318/94230402 0.0% 12/313 3.8% 77432042 NA +11661 chr4 + 190214555 113342989 113342988 113343149 161 ATTGTTA-----TTTCTCTCTGTTTTCACTCAGGTGTTAGAAGGAAAACCCATCTACGTTGATTGTTTCGGCAACTTGGTACCATTAACTAAAAGTGGCCAGCATCATATATTCAGTTTTTTTGCCTTCAAAGAAAATAGACTTCCTCTATTTGTCAAGGTAATAT chr4 - 94230402 35912204 35912203 35912369 58318034 58318033 58318199 166 ATTGTTACCATGTTTCTTTCTCATTTCCAATAGGTATTAGAAGGAAAACCCATCTATGTTGACTGTTTTGGCAATTTGGTGCCACTAACTAAGAGTGGACAACATCATATATTCAGTTTTTTTGCCTTCAAAGAAAATAGACTTCCTCTATTTGTTAAGGTAATGT .......-----.....:...xx....xxx:....:....................:.....:.....:.....:.....:...:.......:.....x..:.....................................................:........:. 7M5I154M 142/161 88.2% 166/94230402 0.0% 5/161 3.1% 77430785 NA +9829 chr4 + 190214555 113345825 113345824 113346049 225 TTTCAAGCATCATCTAGTTAAAGTAAATACTGCAAATCAAATGTGGG---TGAAGCATGTATGTCTTTCTTGTTCAAGGTACGCGATACGACTCAGGAACCTTGCGGACGACTATCATTTATGAAGGAGCCAAAATCCACGAGAGGCCTGGTGCATCAAGCTATTTGCAACTTAAACATCACTTTGCCGATTTATACAAAGGTATCGTAAAAT----CTGCTATAGTGCAAT chr4 - 94230402 35914259 35914258 35914487 58315916 58315915 58316144 229 TTGCAAGCAGT-TCAAGCTAGA--AATTAATTCAAATCAAACGAGAACAATTAATTTTCTGTATGCTTTTTCCACCAGGTGCGAGATACCACTCAAGAACCCTGCGGACGATTATCATTCATGAAGGAGCCAAAATCAACAAGAGGTCTTGTTCATCAAGCCATATGTAATTTAAACATCACATTACCTGTTTACACAAAGGTACTGTGAAATTGTACTGGTATATAGTAAT ..x......x:-..x..:..:.--..x..x.x.........:.x.::---.x..x:x.x.:.:.x:..:..x:x.x....:..x.....x.....:.....:.........:.......:.................x..:.....:..x..x........:..x..:..:...........x..:..x:....:.........::..:....----...x....xx.:... 11M1D10M2D23M3I163M4I15M 167/222 75.2% 229/94230402 0.0% 10/222 4.5% 77431566 NA +3163 chr4 + 190214555 113347790 113347789 113347855 66 AAGACCTTGTCTCTATTAAAAAAAAAAAAAAAGAAAGAATTTAGTAGCTCTTTGTTAGAATAATGC chr4 - 94230402 3372587 3372586 3372652 90857751 90857750 90857816 66 AAGAGCCCTTCACTATTAAAAAAAAAAAAAAAGAGAGAGAGAAGCAACTCTTAGGTCAAATCATGC ....x.::x..x......................:...:xxx..:.:.....x.x.x:...x.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 109975203 80239352 +6582 chr4 + 190214555 113348192 113348191 113348334 143 ATTTACTCTTTCCTTTTCTTCTAAATACTCTCTACTCTTCCTTCTCTCTTTTTTCCATCT-----TGCATGGCATCTTGGGGCGGAAAGGAATCAGAGTCAGATCAAGAACAGGAGGAAGAGGTAATTTTATGACAGTGTCACTTGTT chr4 - 94230402 35915777 35915776 35915924 58314479 58314478 58314626 148 ACTAATTTTTTCTTACCCTTCTAACGATTCTGCATTTTGCCTGCTCTGTTTTCCCCTTCTCTTTTTGCATGGCATTTTGGAACCGAAAGGAATCGGAATCAGATCAAGAACAAGAAGAAGAGGTAATGTTGCTATACCAACAATTGCT .:.x.:.:....:.x::.......xx.:...x:.:.:.x...x....x....::..x...-----..........:....::.x..........:..:..............:..:...........x..::x.:.x::x..x...:. 60M5I83M 103/143 72.0% 148/94230402 0.0% 5/143 3.5% 77432415 NA +10270 chr4 + 190214555 113350192 113350191 113350783 592 TTTGTAACCATTCAATTTATGTATGTTTTCTTTCAGATCGATATGACATCAGAAAAAAGTAAGAATTT------------AAAGAAAATTG------AGTTTGTTTGAAAGCTGGCTAC-CATAAAAAGAAGCATGAA------TTAAAATGCAAGCTAGTTGCTATTACTAACCACTATAGTAATTACATTTTTATATTATCCTTATTAATCATTAATATATTTATAAAAGCAGCTTGGCCAGTTAAATTACAAATATACCTAATTTGCGAGCTAATTAGCAGTAAAATGCAATGATTATTCATCTAAGCATTCACTTTCTTTTGACATTCTTGTTAACCCTGGTATTGCTGTTATGCTTGTTTAGAAACCCACCCTACCGTT---TTGTCCATTTGTTAGCAAAACACTGTCATCTCATCATTTTTTAAGCACTGACATGACAGTATCACTTTTTATG-TAATGCAA-TAGTG-ACTTCTGTAGAGAGCTCATTATTTTTGTAGGATACA--CCTGC--AAAAGTGATACTGTCTAATAGTTCTTAGCTGAAGCTAACCCCATCCAATGCCTGCCCCCTCCCCCATCACTCTTTTGCACTTTTTACTGTGGTGAAGTGTAACCAA chr4 - 94230402 35917920 35917919 35918465 58311938 58311937 58312483 546 TTTTTCATCTTTTTTTTTTTTTTCCTTCTCTTCCAGGTTGATATGACTTCAGAAAAAAGTAAGATTTTCTTTTTACTATAAAAAAAAATTATAATGTAGTTTGTATGAAAGATGATTAAGAATACAATTAAGCATGAAAGTGAGTTAAACT-----TTAACAGCTATTGCTAA------TAGCATCGATACATTTAAA----ACGTAACAGAAAGCAATATATC-ATAGCAGCTACATGATTAAATACGTT----------TTAATGTGTAAATTAACAAGCTTAAAAGAG---------TTCATCTAAGTACTTACTTTCCTTTGACATCCCTAGTGATCCTGCTATTGCTATTTTGCTTGTATGAATGCTCATCCTTCCATTCTCTTGTCCATTTGTTGAT-ACACACTGTTACC--------ATTTGAGA---TAAATGACAGTATCATTTTTAATGAAAACACAATTAGTGTACTAATAT----ATTTCATTAAACTTGTGAAATATAAGCATGCAAAAAAGTGATACTGCCAGAAATAATCAGGCTG--TTTAACCC-------------TCCCTTCC---------------CGCCCTTTACTGTGGTGAAATATGACTGA ...x.x.:.x..:xx...x.x.x:x..:....:...:.:........x................x...------------...:......:------.......x......x..::..x-x...x..xx.........------.....x.-----:..::x......:....------...:.x:x.:.:x....x.----x.x..x:.:xx.x:.......:-...:x...x:.x..:::.:x..x:..----------:....x..::.::...:x...xxx...:x.---------..........:.:.:......:........:.:.:x.:.:....x.......:..x.......x.::.x:.:..:...x..:..---.............:::-.x.......:.:.--------x...:..x---x.x............:....x...-x..::...-.....-...xx.:.----.x:......xx:....:::...:.--.x...--.............:.x:.x.xxx::x:....--x:......-------------:...:...---------------.:.::..............:.:.:..::. 68M12I11M6I22M1I18M6I7M5D17M6D19M4D22M1D26M10D30M9D84M3I16M1D13M8D8M3D24M1I8M1I5M1I8M4D24M2I5M2I31M2D8M13D8M15D29M 359/511 70.3% 546/94230402 0.0% 116/511 22.7% 77432272 NA +86213 chr4 + 190214555 113352146 113352145 113354073 1928 TTTACTCCACCTTTGCTTTGCATGGAAATAACTTGGCTTACATAAACTGTGTGT--GTGTCCCGTGTGACTGTCTCTGACTTGGGTTGCCATGCATCACATTTT-------AACTTTGGACTCACTTATAAGTTTAATCACAATTGTTGTTTCTGTTGTTTTTCTTTCCTTTCCTTTATTTCCCTCCTTGGTCTGTCCATTCTGTGTCTAAACAAGGAGGTTGCTCCAAGGAAAGGACCATGCCTCGTAGCACCAG--ACTGTTTGTTTCATTGTT-AGGTGTGAATTTCCCTTAGATGAAATGCCGGTTTGCAGCTGATTCAGATGT------ATTTTATATAGTCTTTGTATATTGGTAGAACTAAACATACTGAATTTCAGACTTTTAT-ATGA--TTAAAAATGTATATACA------TCATTAGATGTTATTCTGA--GCTTGCTACTACTGGCTTTCTCCTAGAGGAAATCAACTTTCTGCAATTTCTAATGCTTTTTTTCTTATTTTTTCCTCATGGTTGGTTTTCTTTTTTTTTTCAACATTGATCTGTAACATCTGAACAATCTTGAGATACCT----CTGTGTAATTTCACTGCGTTCTTT-----------------GTTTTGATATGTAGTG--TTTTTTTGTGTGTGTATGT-------------------GCGTCTTGTTTT----------AGCTTTGTT---GTATGTGTGGATGTGCTACAAGTGAGAAAAATTAAGCAAGTTATTTCCTGCTCATTTTTCCTTTTCAGTT----------------GTTTTTTTTTTCGTTAGCCTTGCTTTGCTCTTGTACCCTGAGGCCTTGTGGATCTACCATTCCCAGCCCATTTTGTTGCCCCTCCCACCACCACCACCACAGGAAAAGACGCTGTGTCGTTTC-AGTCCTGATTACATTTGCCAATATCT-TTTTTGATTTCCATTTTACTTTCAATGTTTTTCATTCACATCAAAGATGATGAGACAGAATCTACAGAAACATCTGTCCTGAAAAGTCACCTGGTTAATGAAGTTCCTGTCCTAGCAAGTCCGGACTTGCTCTCTGAAGTTTCTGAGATGAAACAAGATTTGATCAAAATGACCGCCATCTTGACCACAGATGTGTCTGATAAGGCAGGTTCTATTAAAGTGAAGGAGCTGGTGAAGGCTGCTGAGGAAGAGCCAGGAGAGCCTTTTGAAATCGTTGAAAGAGTTAAAGAGGACTTAGAGAAAGTGAATGAAATCCTGAGAAGTGGAACCTGCACAAGAGATGAAAGCAGTGTGCAGAGCTCTCGGTCTGAGAGAGGATTAGTTGAAGAGGAATGGGTTATTGTCAGTGATGAGGAAATAGAAGAGGCTAGGCAAAAAGCACCTTTAGAAATCACTGAATATCCATGTGTAGAAGTTAGAATAGATAAAGAGATCAAAGGAAAAGTAGAGAAAGACTCAACTGGGCTAGTGAACTACCTTACTGATGATCTGAATACCTGTGTGCCTCTTCCCAAAGAGCAGCTGCAGACAGTTC---AAGATAAGGCAGGGAAGAAATGTGAGGCTCTGGCTGTTGGCAGGAGCTCTGAAAAGGAAGGGAAAGACATACCCCCAGATGAGACACAGAGTACACAGAAACAGCACAAACCAAGCTTGGGAATAAAGAAGCCAGTAAGAAGGAAATTAAAAGAAAAGCAGAAACAAAAAGAGGAAGGTTTACAAGCTAGTGCAGAGAAAGCTGAACTTAAAAAAGGTAGTTCAGAAGAGTCATTAGGTGAAGACCCAGGTTTAGCCCCTGAACCCCTTCCCACTGTCAAGGCCACATCTCCTTTGATAGAAGAAACTCCCATTGGTTCCATAAAGGACAAAGTAAAGGCCCTTCAGAAGCGAGTGGAAGATGAACAGAAAGGTCGAAGCAAGTTGCCCATCAGAG-TCAAAGGCAAGGAGGACGTGCCAAAAAAG----------ACCA----------------------CCCACAGGCCACATCCAGCTGCGTCACCCTCTCTGAAGTCAGAGAGACATG chr4 - 94230402 35919463 35919462 35921487 58308916 58308915 58310940 2025 TTTGCAACACCTTTGCTTTGCATGGAAATAACTTGCCTTACATAAACTGTATGTATGTGTCTAGCGTGACTGTCT-GATTTTTGGTTGCCATACATTACATTTTTTTAAAAAACTCTGAAATCACTTCTAAGTTGATTCACAGTTTTT--TTCCTCTATTTCTCCTTTTCTTCTGTCTTCTCCTTCCTCAGTCAATTCATTAGTTGTC-----AATGAGGATGTTCCAAGGAAAGGACCATGCCTCTTAAAACCAATTGATGTTTGTTTCATTGTTTAGGTGTGAAATCCCCTTTGATGAAATGCCGGTTTGCAGCTGATTCAGATATCTACATATTTGATCATATTTTAGATTATTG-CAGAATTATTTATA----ACTTCTTATTTTGATCATTAACTAAAAAAAATAAATAAAACATGTTCACTGAATGTTATTCTGACAGTTTGCTAACACTGGCTTTCTCTTAGAGGAAATCGACTTTCAATCAGTTCTAATACTTTCCCCCTCTTTTCTTGTTTAT-------------TTTTATTTGAACATTGATTTGTAACATCTGAACAATCTTGAGATGCCTATCTTTGTGTAACTTCACTGTGTTTTCTTCTGTTTTTAATTTTAAATTTTGTTGT-TAGTGGGTTGttttatttatttatttattattCTTTTCTTTAATGGTGTCCTGATTTTGTTTGTTACAGCTTTGGTAATGTATGTGTGGCCATGCTATA--TTGGTAAAGTTAAGCAAGTTATTTCCTGCCA--TTTTCCTTTTCAGTTTTTTGTTGTTGTTGTTGTTTTTTCTCCCGTTAGCTTTGCTTTGCTCTTGTACCCTCAAATCTTGTGGATCCACCATTCCCGGCCCATTTTGTAGATCTTCCTACCACTGCAACCA------AAGAC----TGTCATTTTTAGTCCTGATTACATTTTCCAATCTCTATTTTTGATTTCCATTTTACTTTCAATGTTTTTCATTCGCATCAAAGATGATGAGACAGAATCTACAGAAACATCTATCCTGAAAAGCCATCTGGTTAATGAAGTCCCTGTACTAGCCAGTCCAGATTTACTGTCTGAAGTTTCTGAGATGAAACAAGATTTGATCAAAATGACTGCCATCTTGACAACTGACCCTTCTGATAAAACAGGCTCTATTAAAGTGAAAGATCTTGGAAAAGCCACTGAAGAGGAGCCAGGAGAGCCTTTTGAAATAGTTGAAAGGGTGAAAGAAGACTTAGAAAAAGTGAATGAAATTCTTAGAGGTGGATCATATACTAAAGAAGAACATGCTTTGCAAAAGTCTCTTTCCAGACAGGAATTTGTAGAAGAAGAATGGGTCATTGTCAGTGATGAAGAAATTGAAGAGGCCAGAAGAAATGCTCCTGTAGAAGTCACTGAACCTATCTGTGTAGAAGTTAGAATAGACAAAGAGACAACAGAGATGGAAAAGAAAGACATGACAGGAATGGTAGATTACCTTACTGAGGATTTAAACAAATACGTTTCTCTTCATGAGGTACAGCCACAAGCTTTACAAGAAGACATAGTAGAAGAGAGATTTGAAGCTGTAGTAATAAGCAGGGATTCTGAAAAAGAAGGACGAGAGTCTCCAACAACCGAAACACTAAGTCCACAAGAACAACATAAGCCAGCCTTAGAAATTAAAAAGCCAGTTAGAACAAAGTTAAGAGACAAGCACAAACAAAAGGAAGGCAAGATGCATAGCAGTGAACAACAACCAGGACTAATGAAGGTCAGTTCAGATGAGTCTCCAAATGAGGAACGTGGCTTAACACCAGCAGCTGCTCCTGAGGCTAAAGCTGTATCCCCTGTCATAGAGGAGACTCCTATTGGCTCAATAAAAGATAAGGTTAAAGCTCTTCAGAAACGAGTGGAAGATGAACAAAAAATACGCTCTAAACTACCTGTCAGAATTCAAACAAGAGAAGGCACTGCTGAAAAGGCTTCTAAAAAACCAGTACCAGTCAAAAAATCAGTTGCACACAAAGCACAGCCTCCTGTTTCACCTTCTCCTAAGACAGAAAGACTTG ...:.xx............................x..............:...--.....:x.:..........-x:x:..x.........:...:.......-------....:..:.x......x......x.x.....:..x..--...:x:.:...:..:..:::...:x.:x.:...:....::...x:.:....xxx....-----..x....x..:......................x..:x....:--:x................-.........x.:.....x...............................:.------....x..xxx:.:..x.xx.....-:....:..xx:...----.:...xx.:...x..-..x.--.x.....x:..x...x.------...:.::............--.:......x:............:...........:......x::x.x.......:....::::..:x...:..x:.:..-------------....x...x.........:.........................:...----:.......:.......:...:.:.-----------------:.....x.:.-.....--..x....:.x.:.x...x.-------------------.:...:..x...----------.......x.---..........x::.....:.--.x:.x...:....................:x--...............----------------.......:.::.......:....................x.:::..........:.........:...........x.x:.:...:.....::.x....------.....----....:...:-................x.....x...-.....................................:.....................................:..........:..:..............:.....x.....x.....:..:..:..x.........................................:...........x..x..:x:x........::....:..............:..x..x.x:..:..::....:..:.......................x........:..x.....:........:..............:..x...:.....x.x.::..x.:...x...x:::x.x....:.:x....xx..::::x::.:...x..x.....:........:..............:.....x........:..:x:...x..x...x.....:........:x.x:x....................:.......:x.x..::.x:.x.:........x::..x..:x.:..::.:...........x...:.:..:.xx.::..x:......x::.:.x:....::..::.xx.x.---....:.x:.:..:::...:..x...:...x.:.:x:.x:.....:::........:.....:x:...xx:x..xx..:x:..:....x:...x....::....:..:..:...:x...:.:...x..:........x....x:..:....:...x.....x........:..:.:x::xx.:..x:x:....x.x.:x..x.x.:...x.x:..:.x:........x.....x::.::...:..x.xx..:...:.x..x.x.x.:x:...::xx.::..:..:::...:...x.x.....:..:.....:.....:..x.....:..:..:..x..:..:........:.................:...:xx..xxx:..::.:..::.....:-.....x:x:..:...xxx...::....:.----------....----------------------.x....::x....x..xx...:x.....:....:x...x....:....x.. 54M2I19M1D28M7I37M2D58M5D43M2I18M1I51M6I24M1D14M4D15M1I4M2I17M6I19M2I79M13D48M4I24M17I10M1D5M2I19M19I12M10I9M3I20M2D31M2D15M16I99M6D5M4D9M1I26M1I595M3I396M1I29M10I4M22I51M 1433/1887 75.9% 2025/94230402 0.0% 179/1887 9.5% 77432683 NA +153349 chr4 + 190214555 113354527 113354526 113359533 5007 AAAAGCAACCACCTGTATCCCCCACTTCAAAAACAGAGAGGATTGAGGAAACCATGTCTGTTCGGGAGCTGATGAAGGCTTTCCAGTCAGGTCAGGACCCTTCTAAACATAAAACTGGACTCTTTGAGCACAAATCAGCAAAACAAAAGCAGCCACAA---GAGAAAGGTAAAGTTCGGGTAGAAAAAGAA---------AAGGGGCCGATACTAACCCAGAGAGAAGCTCAGAAAACAGAGAATCAGACAATCAAACGAGGC-------------CAGAGACTCCCGGTAACGGGCACAGCAGAATCCAAAAGAGGAGTTCGTGTTTCCTCCATAGGAGTTAAGAAAGAAGATGCAGCTGGAGGAAAGGAGAAAGTTCTCAGCCACAAAATACC------TGAACCTGTTCAGTCAGTGCCTGAAGAAGAAAGCCACAGAGAGAGCGAAGTGCCCAAAGAAAAGATGGCTGATGAGCAGGGAGACATGGATCTACAGATCAGCCCAGATAGGAAAACCTCCACTGACTTCTCTGAGGTCATTAAGCAAGAGTTGGAAGACAATGACAAATACCAACAATTCCGCCTGAGTGAGGAGACAGAAAAGGCACAGCTTCACTTAGACCAAGTACTCACTAGTCCTTTCAACACAACATTTCCACTCGACTACATGAAAGATGAGTTCCTTCCAGCTCTGTCTTTACAAAGCGGTGCTTTAGATGGCAGTTCTGAAAGCCTAAAGAATGAGGGGGTAGCCGGCTCTCCGTGTGGCAGCCTGATGGAGGGGACCCCTCAGATTAGTTCAGAAGAAAGCTATAAGCATGAAGGCCTAGCAGAGACCCCTGAGACGAGCCCAGAAAGCCTTTCTTTCTCACCAAAGAAAAGTGAGGAGCAAACTGGGGAAACAAAGGAAAGCACCAAGACAGAAACCACCACAGAAATTCGTTCAGAAAAAGAGCATCCCACGACCAAAGACATTACTGGTGGCTCTGAAGAGCGAGGTGCCACAGTCACTGAGGACTCAGAGACCTCTACTGAGAGTTTTCAGAAAGAGGCCACTCTAGGCTCTCCCAAAGACACAAGCCCTAAAAGACAAGATGATTGCACAGGCAGCTGTAGTGTAGCATTAGCTAAAGAGACACCTACAGGACTGACTGAGGAGGCAGCCTGTGATGAAGGTCAACGTACCTTTGGTAGTTCAGCCCACAAGACACAAACTGATAGTGAGGTTCAAGAATCCACAGCCACCTCAGACGAGACAAAGGCCTTGCCGCTGCCTGAGGCTTCTGTAAAGACAGATACAGGAACTGAATCAAAACCTCAGGGAGTCATTAGAAGTCCCCAAGGGTTAGAACTTGCACTCCCTAGCCGAGATAGCGAAGTCCTCAGCGCTGTGGCTGATGACTCATTAGCAGTGAGCCACAAAGACTCTCTGGAAGCCAGCCCTGTGCTAGAAGATAACTCTTCACACAAAACCCCTGATTCTCTGGAGCCAAGTCCTCTGAAAGAATCCCCTTGCCGTGACTCTCTGGAAAGCAGCCCTGTTGAACCAAAGATGAAGGCTGGAATTTTTCCAAGTCACTTTCCTCTTCCTGCAGCTGTTGCCAAAACAGAACTCTTGACGGAAGTGGCCTCTGTGCGGTCCCGGCTACTCCGAGACCCTGATGGCAGTGCTGAGGATGACAGTCTTGAGCAGACATCGCTCATGGAGAGCTCAGGGAAGAGCCCCCTTTCTCCTGACACCCCCAGCTCTGAAGAAGTCAGCTATGAGGTTACACCCAAAACCACAGATGTA------------AGTACACCAAAACCAGCTGTGATTCATGAAT---GTGCAGAG---GAGGATGATTCAGAAAACGGGGAGAAAAAGAGGTTCACACCTGAAGAGGAGATGTTTAAAATGGTAACCAAAATCAAAATGTTTGATGAACTTGAACAAGAAGCAAAGCAGAAAAGGGACTACAAAAAAGAACCCAAACAAGAAGAATCTTCTTCATCTTCTGACCCAGATGCTGACTGTTCAGTAGATGTGGATGAACCAAAACATACAGGCAGTGGGGAGGATGAAAGTGGTGTCCCTGTGTTAGTAACTTCGG---AGAGCAGGAAGGTGTCTTCCTCCTCAGAAAGTGAACCTGAGTTGGCACAGCTTAAAAAAGGTGCTGACTCAGGCCTTTTACCAGAACCAGTGATTCGAGTACAACCTCCTTCTCCACTTCCATCAAGCATGGACTCCAATTCCAGTCCAGAAGAAGTACAATTCCAGCCTGTCGTTTCCAAACAATATACTTTCAAGATGAATGAAGATACTCAGGAAGAGCCAGGCAAATCAGAAGAAGAAAAAGATTCTGAATCCCATTTAGCTGAAGACCGTCATGCTGTTTCCACTGAGGCTGAAGACAGG----------TCTTATGATAAGCTAAACAGAGACACTGATCAGCCAAAAATCTGTGATGGCC---ATGGATGTGAGGCCATGAGTCCTAGCAGCTCAGCTGCTCCTGTCTCTTCAGGTCTACAGAGTCCGACTGGTGATGATGTTGATGAACAGCCAGTCATCTATAAAGAAT---CATTAGCTCTCCAAGGCACT-CATGAAAAAGACACAGAGGGAGA--------AGAGCTTGATGTTTCTAGAGCAGAATCTCCACAAGCAGATTGCCCCAGTGAAAGCTTTTCATCT-----------TCATCCTCTTTGC-------------CTCATTGTTTGGTATCTGAAGGAAAAGAATTAGATGAAGACATATCTGCCACATCTTCTATTCAAAAAACAGAGGTCACAAAAACTGATGAAACATTTGAGAACTTACCAAAGGA--------CTG-----CCCCTCTCAAG--ACTCATCCATTACTACTCAAACAGATAGATTTTCCATGGATGTTCCCGTGTCTGACCTAGCTGAGAATGATGAAATCTATGATCCACAAATCACTAGCCCTTATGAAAATGTCCCTTCCCAATCTTTTTTCTCTAGTGAAGAAAGCAAAACCCAAACAGATGCAAATCACACCACAAGTTTTCACTCTTCTGAAGTGTATTCTGTTACCATCACATCCCCTGTTGAAGACGTTGTAGTGGCAAGCTCCT--CTAGTGGAACTGTTTTAAGCAAAGAATCT-AATTTTGAGGGCCAGGACATA--AAAATGGAATCCCAACAGGAAAGTACCTTGTGGGAAATGCAATCAGACAGTGTCTCTTCATCTTTCGAGCCTACTATGTCCGCTACA---------------ACAACAGTTGTTGGTGAACAAATAAGCA---AAGTCATCATCACAAAAACTGATGTGGATTCTGATTCTTGGAGTGAAATTCGGGAAGACGATGAAGCCTTTGAGGCTCGTGTGAAAGAGGAAGAACAAAAGATATTTGGTTTGATGGTAGACAGACAATCACAGGGTACCACCCCTGACACCACTCCTGCTAGGACCCCAACTGAAGAGGGGACCCCAACAAGTGAGCAAAACCCATTTCTGTTTCAGGAAGGAAAATTGTTTGAAATGACCCGAAGTGGTGCCATTGATATGACCAAAAGGTCCTATGCAGATGAAAGTTTTCACTTTTTCCAAATTGGTCAAGAATCCAGGGAAGAGACTCTCTCTGAAGATGTGAAAGAAGGGGCTACTGGGGCTGATCCCCTACCGCTGGAGACATCAGCTGAATCACTAGCACTTTCAGAATCAAAAGA----AACAGTGGATGATGAGGCAGACTTACTT------CCAGATGACGTGAG-----TGAGGAAGTAGAGGAAATACCTG---------------------CTTCGGATGCTCAACTTAACTCCC------------AAATGGGGATTTCAGCCTCCACTGAAACACCTACAAAAGAAGCTGTTAGTGTAGGGACCAAGGACCTCCCCACCGTGCAAACGGGTGATATACCTCCTCTCTCTGGTGTAAAGCAGATATCCTGCCCCGACTCTTCTGAACCAGCTGT---ACAAGTCCAGTTAGATTTTTCCACACTCACCAGGTCTGTTTATTCAGATAGGGGTGATGATTCTCCCGATTCTTCCCCAGAAGAACAGAAATCAGTAATCGAGATTCCTACTGCACCCATGGAGAATGTGCCTTTTACTGAAAGCAAATCCAAAATTCCTGTAAGGACTATGCCCACTTCCACCCCAGCACCTCCATCTGCAGAGTATGAGAGTTCAGTTTCTGAAGATTTTCTATCCAGTGTAGATGAGGAAAATAAGGCGGATGAAGCAAAACCAAAGTCCAAACTCCCTGTCAAAGTACCCCTCCAAAGAGTTGAACAGCAGCTCTCAGATCTAGACACCTCTGTCCAGAAGACAGTGGCTCCTCAGGGACAGGACATGGCAAGCATCGCACC---------AGATAATAGAAGCAAATCTGAATCTGATGCTAGT---TCTTTGGATTCAAAGACCAAATGCCCAGTAAAAACCCGAAGTTACACTGAGACAGAAACAGAGAGCAGAGAGAGGGCCGAGGAACT------TGAGTTAGAATCAGAAGAAGGG---GCCACAAGACCAAAGATACTTACATCCCGATTGCCAGTTAAGAGCAGAAGCACTACATCTTCCTGCAGGGGGGGCACGAGCCCCACAAAAGAAAGTAAGGAGCATTTCTTTGACCTTTACAGAAATTCCATAGAATTCTTTGAGGAGATTAGTGATGAGGCTTCCAAATTAGTGGATAGGCTGACACAGTCAGAGAGGGAGCAGGAAATAGTTTCAGACGATGAAAGTAGTAGTGCCCTGGAAGTATCAGTAATTGAAAATCTGCCACCTGTTGAGACCGAGCACTCAGTTCCTGAGGACATCTTTGACACAAGGCCCATTTGGGATGAGTCTATTGAGACTCTGATTGAACGCATCCCTGATGAAAATGGCCATGACCATGCTGAAGGTATTTGCCAGCCACCGGGATTCCCTGTGCTACGCATGTCATAAAATTGATATAGTTTTTTTGTATGTTTGTTTTATTTGATG----------------------------------------ATTTGTGTCTCATTTTC-TTTAAGCTTTCTGTAGTGGCTAAT----GTGTTTG------------------------------------TGTAAGCCCTTTGTG---TTTTGTGCTTTCTCTGTA-TACTCTTGTCTAAGAAAACAATCTCAAGATTG--AGTAATGAGAATGCTTATGGAAAACATAAACATAATAA chr4 - 94230402 35921443 35921442 35926501 58303902 58303901 58308960 5059 AAGCACAGCCTCCTGTTTCACCTTCTCCTAAGACAGAAAGACTTGAAGAGACCATGTCAGTTCGTGAGCTGATGAAAGCCTTCCAGTCAGGTCAAGACCCATCCAAGAATGTATCTGGATTGTTTGAGCACAAGTCTGTCAAACAAAAGCAACAACCCCCTGAGAAGGAAACAACACGG--AGAAAAACAATTTCTTCACAAAG---TGAAACAAAACGAGTATCAAGC-CACAAGACAGACAAACAGAAGGACAAGCAAAGCACAGTATTAAAAGCAGAGA--------AAGAGCCACAGCCAAAG--AAAGGAAGAATGCAAGTGTCCACTGTTGATACTATCAAGAAAACTGTTGGCAAAGACCAAGTAAAACAACAGAGCAGCAAAAAAACAACAGTTGAACCTCCCCCTCCAGTATCTGCTGATGAAAGTACCAAAGATTCAGCAGTTGTAAAGGGCAAGACTTCTGATGACCAAGGTGATACAGACTTTCAGATCAGCCCTGACAGGAAAACCTCAACAGATTTTTCTGATGTCATTAAAGAAGAACTTGAAGACAATGACAAATACCAACAATTTCGACATCTTTCAGTGACAGAGGAAGGTGAGCTTAACTTGGAGCAAGTACTGACCAGTCCCTTCAATGTTGCTTTCCCTGCTGAGTATGTAAAAGATGGATTCCTTCCTGCTCTTTCTCTGCAAAGTGCTGCTTTTGATGGGAGCTCAGAGAGCCTTAAACATGAAGGTGTGGCTGATTCTCCA---GGTAGCCTGCTTGATGGAACTCCTCAGATCAGTTCTGAGGAAAGTTATAAACATGAGGGTCTGGCAGAAACTCCAGAAACAAGCCCTGAAAGCCTTTCTTTCTCACCAAAGAAAACTGATGGGCAAATTGAAGAAGCTAAAGGAACAGCTAGAGTACACACAACAGCAGAAACATGTTCTCCGAAGGAACTCTCACCAAAGGAAAATGAAAAAGGTATTACTGAAAAACAGCTAGATGCTGTTACTGAGACTAGTGAGTCTCATTCTGACCGTGTATCAGAAGAG---------------CTTGTACCTACAGCCTCTGAAGAAGAGGCTGAT------------------------------------AAACCTAAAGGA------------------------------------------AGTAGCTCAGCTTCCATTACGAAAGATATTAGCAGGGATAAAGAATCCAGAACCACTCCACATTTAACTCAGTCTTCTGAAACACATGACACTGCTTTAGAGAAAGAGAAAGATATAACCTGTGAACGCCGTGTTGTGGTTAGAAGTCCCCAAAAATTGGAACTTTCACTTGCTAGCCATGATAGTGAAAGCTTTAGCCCAGTTGCAGATGACTCTGTGGCTGTAAGTCATAAAGACTCACTGGAAGCAAGCCCAGTTCTAGAAGATAACTCCTCACATAAAACGCCTGATTCTTTGGAACCCAGTCCTATGAAAGAATCTCCTTGCCGTGATTCTCTTGAAAGTAGTCCTGTAGAACAAAAAGTGAAAGCTGGTATTTT---GGGGCAGGGTCCTCTTCAGCCTATTCTTGGCAAAGGAGAAACTTGCCCAGAGCTGGCAACAGTGCGTTCCAGGATTCTCCGTGACCCTGAGGGAAGTGCTGATGATGACAGTCTAGAGCAAACATCTCTCATGGAGAGTTCAGGGAAAAGTCCTCTTTCACCTGAGACTCCCAGTTCTGAAGAAATTAGCTATGAAATCACACCTAAAACAGCAGACTCACAGGCACTATCAAATATACCAAAGTCAGCCGTGATCCCTGAAGTCAGTGAAGAACCAGAGGATGAATCAGAAAGTGAACCAAAGAAAAGATTTACCCCTGAAGAGGAGATGTTTAAAATGGTGACCAAAATCAAAACATTTGATGAATTAGAGCAAGAAGCAAAGCAGAAGCGTGATTACAAAAAGGATTGTAAGCAAGATGAATGTTCTTTAGTTGCTGACTCAGAAGTCACATGT------GAAACTGAGGAACCGAAGT---CAAAAACTGTAGAAGAAAAAGATATACCCACAGTGGTAATGTCTTCAGCTGAATCTAGAAAAAGTTCTTCGTCTTCAGAAAGTGAGCCAGAATTGACCCAGCTTAAAAAAGAAGCCGATTCAGGTCTCTTAATGGAACCTGTGATCCGAGTGCAACCACCTTCACCGTTACCATCTAGTATTGACTCTAGTTCTAGCCCTGAAGAAGCAGGTTTTCAACCCATTAATTCAAAACAGTGTTCTTCCAGGATAGGTGCAGTTACAGCAGAAGAG---GATAAACCAGCAGAAGACGACAAAGATGAACCATACATCCTTGGAGACAGCTGTAAGGCTTCCAC-GAGA---AAATCAGGCATTTGTCATTCTGATGGTTGTGTATCAGCAGAAACTGAGGAATCAAAA---TGTGATAGTACAGATGACAGTGAGATGGTTAGTCCTAA---------TGCCCCGGTGACAAAATGTG---AGGGTACTCTGTGTCATTCCATTGGTGA-----CTGTTCTCAGAAAGAAGTTCACACTGAGTCTTCAA--CACTACACCAAGATGATACCAATGCAAATGCTATCAAAAGCACTACTCTTTTAA-----------CACATACAGCTCTCACTGCTAAAGGAATGGTGTCTGAGAAAATAGATGATGGTTCTTGTGGACACAGTAACACTGAGTTCTCTGTACTACAAGATGGCAAACTGACTGAAGATG------------ATCCCATTGAACATTCTGATTTTGCAAAAGTAAATGCAGATTTTGAAACACCTCAGACGGAGATTTGTGCTGAGGAACCCTTGTCAGAGTATTCACCCCTTACCACTGAAACAGTGGAACTT-----GAAAGTT---GTGT-------AGTGGATGCTGCTGAAATTAAAGCTCCTCATATAGTAAGCCCTTATGAAAATGTGTCTTCTGAACATTTTTT---TACTGATGGTGGTGAAAGTAAGGTAGGAACTGGTCA------AAGTCTGCTCTCTAGGGAAGACTATTCTGTTGAAGAAACA-----------AAGGATCAGACTGGCGAGGCTCTGCTTAGCAGA---GGCAAAGGTAGTGAGTATGAATCTTCAGAGGAAGTACATATGGAAACAGAACTTAAAACAGAGGACGTATTTCAGAAAATCTTGCCAGGG------TCTTCAGCATCAGATTCCACAAAGTTAGCTGAATCTGCCCTTAAGGATATAAGAGATGAAACAGAGAAAATGATCAGTCAAGTTGTTATTACTAAAACTGATGTAGATTCTGACACATGGAGTGACATACGTGAAGATGATGAAGCTTTTGAAGCTCGAGTAAAAGAAGAGGAACAAAAGATATTTGGGTTGATGGTAGACAGACGATCACAAGGCACAACACCTGATACAACACCAGCCAGAACACCCACTGAAGAAGGGACACCACTTAGTGAACAAAATCCTTTTCTTTTTCAGGAAGGAAAGTTGTTTGAAATGACTAGAAGTGGAGCTATTGACATGACCAAAAGAAACTATCCAGATGAAAGTTTTCATTTCTTCCAAATGGGGCAGCAGCCTCAGGAAGAAGTTTCTTTATGTGAGGAAAAGAAAGAAGCAGTAGAGGCGGAATCTTCCAAGCCAGAGAGCTCACCAGATCCACTGTCACTTTCAGAATCAGAGGACCTGGATATACAAGGAAAAGATACACTGAATCGTTCACCCTCACCACCTGAGCCTTGTGATAAATCAGAAGAAATGACTGGTGAAGGCGTCGGCATAGGCACTGCAAAAGCAGAGCTTAAATCCAGAATTCCAATTAAAATGGGTATTTCAGCTTCTTCAAAATCACCAAAGAAAGAAACTGCTGCCTCTGAAGCTGAATCCCTCTTCACAGTGGAGAC---TGACATA---------GTCGATAGCAGTCAGGTGCCTTTCCCCATCTCTCCTGAGCAGTCTGTGGTAGAAGATGAGTTAGAATTTTCCAAAGTCACTAGATTTGTTTGTTCTGAAAAGGATGATGAGTCCCCAGACTCTTCACCAGAGGAACAGAGATCTGTGATAGAAATCCCTACTGCTTTAATGGAGAGAGTGCCTTCTTGTGAAAGCAAATCCAAAATCCCTGTAAGAACAGCTGCTGCTGCATCACAATCATTGCAACAATCAGAAAATGAGAACCTTTTCACTGATGGCTTCCTAGACAGTCTGCAGTGTGAAGGAAAAGATGACCAAGCAAAACCAAAGTCTAAAATTCCTGTCAAATCAGCTTTCCAGAGAGCTGAACAACAATACACATCCACAGACACATCTGTCCACAAGCTAGAGTCATCCAAAGCTCTCGACATGACAAGCAAACTACCTACAAAACAAGATAGCCGAAGTAAATCTGAATCTGATGCAAGTATTCCCATGGACCCAAAGACCAAACGTTCAATAAAAGCTAGGAGTTATGCAGAGGCAGAAGCAGAGACCTGGGAGAGGGAGAGAGAGTTAAAGGTTGAGCTAGACTCAGATGAGGCAACAGCAGCAAGACCCAAGGTATTTTCATCACGGGTGCCAGTTAAAAGCAGGAGCACTACAGCCTCCCGCACTGC---TTTTAGTCCTACAAAAGAAAGTAAGGAACATTTTTTTGACCTGTATAAAAACTCCATAGAATTCTTTGAAGAAATTAGTGATGAAGCTTCTAAGTTAGTGGAAAGACTTACACAATCAGAAAGAGAACAAGAATTAGTTTCAGATGATGAAAGCAGTAGTGCCCTAGAAGTTTCAGTTATTGAAAACGTGCCATCCATTGAGACTCAGCAGTCAGTTCCTGAAGACATCTTTGACACCAGACCTATTTGGGATGAGTCTGTAGAGACTCAGATTGAACGTATACCTGATGACAATATCCATGACCATGCTGAAGGTATTTGCCAACGACTGGGATTCCCTGTGCGCCGCATGTCAT-AAATTAAAA----CTTTTTGTTTTTTTGTTTTCTTTAgtgtgtgtgtgtgtgcatctgtaagtttgtataaatgtgtataatgtgtgtAGCATTTTCTTTTAAGCTTT---TGATGGTTAGTTGTGGTAttttcttttattttcttttttttttttttttttttACCCCTATAAGCTGTGTTTGTTATTTTGTGTTGTGTCTGTATTTTTCTTGTTTGTG-AAATAATCTCAAGATTGCAAGTCAT--GAATGCTTATGGGAAGTGTTATTTTAATAA ..:x:..:..x.....x..x..:x..:.x..:.....:..:x....:..:........x.....x...........:..:..............:.....x..:..:x..:x.x.....:.x...........:..x.:x...........:.x..xx---.....:.:x.x.::x...--.......x..---------..:.---:..x..x..x.x..x:xx....-..x..:.....x..x....x::x...:.:.:..-------------......--------..x:.x......x:..x--...:..:..:.x.:x..x...x.::.x.:x::..xx..::..:x..:x.x:::..:xx.:.x:...xxx.xx...x:.....x.x.------.......x::.xx:....::...xx..x.....:xx..:...xxxx.x...xx:x..:.:x....:xx.......x..:..x..:.::..::.x...........x..:...........x..x..:..:.....x........:x....::.x..........................:..x.xxxx.xx:.x......::.:.xxx.....x....:..x........x..:.....:.....:::x:.x..:..xx::..x..::.:.......::........x.....x...:.:.....:.x......x.....x..:..x..:.....x..:x....:..x..:..:.::.....:---..:......x.x..x..:..:........:.....x..:.....:.....:.....:..:..:.....:..:..x..:..:.....x............................x...x.:.....:..::...:.x..:.:..xx:.:.::::.x.x..x..x:......:x:....xxx:..:..:.x::.xx.:.xx:..:.::xx.xx...:x:x.....:.:.::xxx.x::.x..:......:x:xxx...x.::x.x....xx..x.x:x::.....---------------.:::x.xx:...:x.:..:..::.x.:.x....------------------------------------.x.....x....------------------------------------------:....:.....::x..xx..:x..:x.:x...:::..x.x.........x.:....::..x.:xx:..xx..x.:.:xxx:x::.x...x:..x..x..:...x...x.x..:x.:x:xx.xx:...x:.:x.xx..x:..............:::..:......x....:x......:x.....:...:x.:.:...x.x..x..x........xx.:..x..:..:..:........x........x.....x..x..............:.....:.....x.........:....:..x......x..........:...........:.....x.....:..:.....x....x...::....:.....x.....---::.x..xxx........xxx.x::.x...x....:x....x::.xxx.:..:x....xx.x.....x...x..x.x.....x........x..x........x...........x.....:.....x...........:........:..:..:.....x.....x..:.....:.........:.:........::.:.....:.....x:....:x:.------------.:..:......::....:.....:.x....x---...x...:---........x.......::.::xx:..:..:..:..:..x..........................:.............::.........:.x..:.................:x.x..:........:..x:x:..:.....x....x.....:.x:.x.....:....x.:::xx...------..x::x..x.....:..::---..::x.x..x:..:..x:..::.:xxx:.x.x...x..:.:x....:.---.:xx:..:..::xx.....x..:...........:..x..:...:.x.............:x..:..:.....:..:...x::.....x.....:.....:.....x.....x..::.x.....x..:..x.....:.:...:..:..x.......:.x:x..:..:..::.::x...x.....:.:.x...:..:...:::..x..x...xxx:......---.::...:...x......x:.x:.xxx....:.x:.:x.xx:..:....x.:::.:xx.:......-...:---..:x....----------...x...:.x:xx..xxx:x...x.....xx.::.....---......:.:x---...:xx.....::x:.x.......:---------...:..x..xx.xxx.x..x---..:..x.xx:xx..x..xx::...:...-----.x..:x..x:x..::.:.---..:.::x...:...--....-..:x..:.x..:..x:.x.x.:.--------.:...x:x.:x:..:..:-----------....x:...x.:x.x.::x.:..:.xx.xx::...-----------.x..xx.::...:-------------..x.x.x:.:x...::xx...:x::x:..:.::x......::------------x.:.:...x..x.xx.x..xx.::.....::x:...x.:xx.....:.xx::x.x:.x...--------...-----...:.x...::--.:...:..x....:...x......xx::.:..-----.:.x...---....-------..:x..x:x..x......:x.x.x...x..x..x::x.................x:....:x..:x......---..x...x.:x:.::...x:x.:::..:x:.x::...------....:.x.x....xxx....xx.........:xx:xx...-----------.::x:.::x.x....:..x::..--:...::..---.x:xx.:.:.:x..:.x.-...:..x..:.xx..x.....--:...::...:::x..xx:..::::::x..x::.:....x:x::...:x------......x.x.:x..x:.:..x.x..:x...:x.---------------.:..x..x..xx:xx..:x....:.x..---....::.:..:..x...........:........:x.x........x..x..x.....:........:.....:.....x..:.....:..:.................x................:......:..:..x..x.....:..x..x..x..:..:..x..x........:.....x...x:x.....:.....:..x.....x..............:..............:x.......x..:.....:...........:xx....x................:..:........x..x..:x.::.:x:......:::.:::.:xx:x..x.x:..::...::..x::x.:...x..x:.:::xxx..::....xx...x.x..x:....:x..............:.:..----:.:.xxx:.x..x:..::.x...x.x.:------..xx.:x..x....-----...x:..x:...:.....:x...---------------------..x.::.x..xx.:.....x...x------------.......x........:..:x.x:..x....x.x:......:...:.:x:x:x.:::.::.:xx....::...x...x.:..---...:...---------x::.:.:xx.:x...:.::.:.x....:x....:....:.x:x....---.x...x:x.......x.......x.x....:..:.:.....:...x..x.:..:......x..:..x..:.....x.....:.......:...x..:..x..:..:........x::x.......:x.......:.xx..................:........:..x::xx.::..x.xx.x.x.x..::x.x.:xxx....:x......::::xx.:x....x.::..:...xx....x.:x.xx:x...::x..:.xx..:x................:...x.:.........x:.x.::....:....:......:..::x.x..xx:x:......x........x...x:..x.x.x:.:x.:.xx.xx......:......xxx:...---------.....::x....:.................x...---:.:x....::...........:.::..:.....:.:x.:.....::.x...:.....:......x.x.:.......xx:::..::.------....:....x.....x..:.x:---..x:.......x...:..:..x....x..:x..........:.....:.........x.:...:...xx.x---:x:x..:..:.................:.....:........x..:.:...:.................:..:...........:.....:..:........x..:..x.....:.....:..:..:..:...x..........:........:...........:.....x.....x........:x.....:.::.......:x....x...........:..............x..:..:...............:.x.......x.........:..x........x...:x...........................:.x..:..............xx..........-.....:.x.----:.......x.x........x...::..----------------------------------------..x.....xx.......-..........---.::...:..:.----..:...x------------------------------------.:.....:x.x.x..---.......:.x.x......-.x:......:.:x.-...:.............--...x..--............:..:::.x.x:x...... 158M3I18M2D10M9I4M3D22M1D33M13I6M8D17M2D86M6I364M3D285M15D33M36D12M42D380M3D220M12I31M3I8M3I180M6D19M3D48M3I221M3D65M1D4M3D8M10I39M3D10M3I25M9D20M3D28M5D18M3I14M2D4M1I23M8I18M11D35M11I13M13I42M12D61M8I3M5I11M2I32M5D7M3D4M7D72M3D36M6D40M11D23M2I8M3D18M1I21M2I48M6D33M15I28M3I424M4I28M6I14M5I23M21I24M12I82M3D7M9D47M3I396M9I34M3I86M6I22M3I71M3D356M1D9M4D27M40I17M1I10M3D11M4I7M36I15M3I18M1I14M1D17M2I6M2D30M 3271/4761 68.7% 5059/94230402 0.0% 544/4761 11.4% 77433084 NA +7594 chr4 + 190214555 113360725 113360724 113360903 179 ATTTGGAGAAGTGACTTCCTTTCTTTGAATGA------ATCAGTACTGTGGTTCCTCTCCTGTCATAGACAACCTTTGGCCATTCTGTTTTTGACCTTCTCCAGATCCACAGGATGAGCAGGAACGGATCGAGGAAAGGCTGGCTTATATTGCTGATCACCTTGGCTTCAGCTGGACAGGTAAAA chr4 - 94230402 35927462 35927461 35927639 58302764 58302763 58302941 178 ATTCAGAAAAAAAGTTTCCCTCCTTTGGTTTATCACCTATAAGAAATGC--TTTTTAATTTGTAAAAGACAACTTGTGGCTGTTCT--CTTTGAACTTT---AGATCAACAGGATGATCGGGAACGGACTGAGGAAAGACTGGCCCACATTGCTGATCACCTTGGATTCAGTTGGACAGGTAAAA ...::..:..:x:::....:.:.....:x.x.------..x..x.x..:--..::.xx::...x.x.......:.x....::....--:.....x...:---.....x.........x.:........::........:.....::.:.................x.....:............. 32M6I11M2D35M2D11M3D83M 129/172 75.0% 178/94230402 0.0% 13/172 7.6% 77433263 NA +10608 chr4 + 190214555 113363311 113363310 113363493 183 TTTACAAAGTAGTATTTTATCTTCTAGAATTAGCAAGAGAACTGGATTTCACTGAGGAGCAAATTCATCAAATTCGAATTGAAAATCCCAACTCTCTTCAAGACCAGAGTCATGCACTGTTGAAGTACTGGCTAGAGAGGGATGGGAAACATGCTACAGGTAAGTGGGGAACTATATGCATAT chr4 - 94230402 35928964 35928963 35929144 58301259 58301258 58301439 181 TTCACAGAAAAGGATTTCTTTTTC-AGAGTTAGCAAGAGAACTGGATTTCACAGAAGAGCAAATTCATCAAATCAGGATTGAAAATCCTAATTCACTTCAAGACCAGAGCCATGCACTCCTCAAATACTGGCTTGAAAGGGATGGGAAACACGCAACAGGTTCGTTATCAATTATA-GTATAT ..:...:.:x..x....:x.:...-...:.......................x..:.................:x.:...........:..:..x..............:........x:.x..:........x..:..............:..x......xx..x:xx..:....-.:.... 24M1D151M1D6M 147/181 81.2% 181/94230402 0.0% 2/181 1.1% 77434347 NA +8215 chr4 + 190214555 113364900 113364899 113365187 288 TATTTTTACAAAGACTTTTAATTAGGCTTTGATT-----------GTTTTTTTCTGTACAGATATCAAAAATTTA----------GTAAGGCAGTTGAGTGAAA------GAGATTTTTAAGAGTACCTCTCAGACATAATAAATGCTGTTTCTCTAATGTGTCAGATACCAACCTCGTTGAATGTCTCACCAAGATCAACCGAATGGATATTGTTCATCTCATGGAGACCA---ACACAGAACCTCTCCAGGAGCGCATCAGTCATAGTTATGCAGAAATTGAACAGACCATTACACTGGATCATAGTGAAGGTCAA chr4 - 94230402 35929461 35929460 35929765 58300638 58300637 58300942 305 TGTTTGTATGCAGCCTGTCAATAAAACTTAGATTTTTACATAACAATTTTTTTTTAAATTGGTATCCTACATACATACTTCATATGGAAAATAGAAGGGAGAGACCATGTGAGATTCTTAA--------CTCAGCTATA-----TGATGTCATTCTAATCCCACAGATACAAGTCTTACTCAATGTCTTACAAAAATCAATCGAATGGATATTGTTCACCTAATGGAGACCAGTGGCATTGACTCTATGCAGGTCCACGGCACTCGCACATATACAGAAATTGAACAAACAATAGGATTGGACCATAGTGAAGGTAAA .:...x..::x..x..x.:...x.::...x....-----------:.......:.:x.:x.:....xx.x..x:.----------.x..:::..xx.:.x..:.------......:....--------.....x:...-----..x...:x:......x:xx.......x.::..:::.x.......:..x..:.....:.................:..x..........---:..:x..x:..x.x....xx.:.:x..x..::.xx...:.............:..x..x:x.:....:............x.. 34M11I30M10I19M6I11M8D10M5D88M3I83M 192/275 69.8% 305/94230402 0.0% 43/275 15.6% 77435439 NA +9821 chr4 + 190214555 113367554 113367553 113367882 329 TTCTGCCTTTA--GGGTTCTCGGTACTTCAAGAGGAGTTATGCACTGCACAGCACAAGCAGAAAGAGGAGCAAGCTGTTTCTAAAGAAAGTGAGACCTGCGATCACCCTCCTATCGTCTCAGAGGAAGACATTTCTGTTGGTTATTCCACTTTTCAGGATGGCGTCCCCAAAACTGAGGGGGACAGCTCAGCAACAGCACTCTTTCCCCAAACTCACAAGGAGCAAGTTCAACAGGATTTCTCAGGGAAAATGCAAGACCTGCCTGAAGAGTCATCTCTGGAATATCAGCAGGAATATTTGTGAGTTTCCAAAG--AAAGCCTGTCAAATGTA chr4 - 94230402 35931141 35931140 35931467 58298936 58298935 58299262 327 TTCTTTTTTTAAAGGGTTTTCTGTACTGCAAGAAGAACTGTACAGTTCAAGACATAAGCCAGATGAACGCCACAGAATATCTAAAGACGGTGACCCAACAGAACACCCTCCCATTGTTTCTGAGGAAGATGTATCTGTTAGTTATTCTCCTTTTCAGGACAGTACTCCTAGGAGTGAGGCAGAGCTATCAATGGCTGAGCTCCTAAGGCAAACACACAAGGAACAAGTGGAAGCTGAATTCTCAGGGAAACCCCAAGATGTGATAGAAACAACATCTTCA------CAACATGAATATTTGTAAGTGTTGAAAGACAAAGTCAATCTTACGTA ....x::....--.....:..x.....x.....:..::.:.:..x.x..x::..:....x::.x..:x:x..x:xx:.x........x:....xx.xxxx..x........:..:..:..x........::.x......:.......:x..........::.::::..:.::.x.....x:..xxxx...::::.x.x:...:.xxxx.....x........:.....xx..xxx..x............x:x.....:x..x:x...:x:x.....:::------..:..x..........:...x.:x....--....:.x:..xx.:... 11M2I267M6D28M2I17M 210/323 65.0% 327/94230402 0.0% 10/323 3.1% 77436413 NA +8094 chr4 + 190214555 113369490 113369489 113369809 320 TCTCATTTGGCTTTTTGATTC-CAGTGTGACAACTCCAGGAACAGAAACATCAGAGACTCAGAAGGCTATGATAGTACCCAGCTCTCCCAGCAAGACACCTGAGGAAGTTAGCACCCC---TGCAGAGGAGGAGAAGCTGTACCTCCAGACCCCAACATCCAGCGAGCGGGGAGGCTCTCCCATCATACAAGAACCCGAAGAGCCCTCAGAGCACAGAGAGGAGAGCTCTCCGCGGAAAACCAGCCTCGTAATAGTGGAGTCTGCCGATAACCAGCCTGAGACCTGTGAAAGACTCGATGAAGATGCAGCTTTTGAAAAGGTAA chr4 - 94230402 35932604 35932603 35932897 58297506 58297505 58297799 294 TTTTATTCGAACCTTTGATTTGCAGTGTCACAACTCCAGGAACAGAG------------CAGAGGGC------AGCA------------AGCGATACATCTGCACGCTTCAGTGCAACAAAGGAAGAGAGAGAAAAAACATCCCCACAGTCCCCATCATCTGCTCAGAGAGGTGGTTCTCCCATCATCCAAGAGCCTGAAGAGCTCCATCTCCATCAGGATGATCCGTCTCCAAGGAGAACTAGTCTAGTGATAGTGGAGTCAATTGATGAACAGCCAGAAAAGCTTGGAAGCGGCTATGAGGAGGAATCTTTAGAAAAGGTAA .:.:...:.:x::.......:-......x.................:------------....:...------..:.------------...:.x...:...x:x:xx.:..::.xx.---x.x....:::..:..:x::.x..:x...x.....x....::x:x..x.:..x..:...........x.....:..:.......:.:xxxxx..:x::..x..xxxx.....:x...:...:..:..x..:...........x:::...:.x.....x..:.xx:x..:...xxx.x....:..x.x.x....x.......... 21M1I25M12D8M6D4M12D29M3I203M 192/290 66.2% 294/94230402 0.0% 34/290 11.7% 77436886 NA +14170 chr4 + 190214555 113372438 113372437 113373191 754 AAAGTTTCACAATACAATGTAAGCTAAAGAAGAAACCAGTAGTGAAGTCATTCCTTAGCATGTTAAACAAAGCAATGCTTCCATGCTTCCACCAGGAGCTAACAGAGGAATTAGGGGAGCTGGAGGCCAGCTCAGATGAGGAGGCGATGGTAACTACCAGGGTTGTCCGCCGGCGAGTGATTATTCAGGTACCCACTGTTAAATTACTGCACGT--------CAGGGACAGTCCTGTCCCCATATTCTAAGAGTGAT-------CAACC---TGGAT-------CAATGAAGGCTTGGCATGTTCCTTAGGTAGTGCATGGCCATTCAAAAGCAGATCCCTTAACTCTCATAAGTTCTGTTTGCAAACAAATGCAGTGGTTCCAGCTTTCCT-------CCAGGAGAGCCACCAAGCA-----------AGAGCAAGACTTGGCTTCTTCACTTCCACCCACCTCACCTCTCGCTTTTCTATTTTTGTTGAAGTTTTATCTAACTTTGGTCAGATTCTCCTAAGCATGTTATTACCCACTTG---------AGTTTTTCACTAGTTGACAGGATTTTGTATCTCAGCAATGCTTCTCAACATCGCCTTTGATTTTCTAACATTCCTCACATTATAAGCACTTGGGAGTAGTTCCTCAGAATTGGTGCCAAACACCACAGTGACCCTTTTCTCTCAACTGTTTAGGGAGACGATATGCCTGAAATACCCCCAGAAACAGTCACAGAAGAAGAATACATTGATGAGCATGGACACACCGTGGTAAAGAAGGTATTGTCTAGTATATCC chr4 - 94230402 35934163 35934162 35934896 58295507 58295506 58296240 734 AAATATTCAGAAGATGATTTTAGATAAAAACAAGAC-------AGAGCCTATAAATACTGTATACAACAGAGCACTGTTTTCGTGCTTCCAATAGGAGTTAGCAGAGGAGTTAGGTGAGCTGGAAAACAGCTCGGATGAGGACGAGATGGTAACTACCAGAGTTGTTCGTCGCCGGGTGATTATTCAGGTACTAAGTGTGGAATGACTGCACATGCCAGTGGTGGCGAAGGCCACGGTAACACCTT-TAGGAGTGATGCTGACACAACCGCTTGGCTGGTATTGCAACTGGAGCTGGAC-TGCTCCTGA-ATAATGCATGATCATT---AGATAAATC-----ATTCTAATACCTTTTATTG--AAAAGAGGATCATAGTAACACCTTTTCTAACACAACTCTAAATGCCATTAAACACTTCAGCAGGGGGACAAAGACT----TTATTCAGCCCAACCCGCAACACCATCAACTAACGTGTCTTTGCCTGACT--------ATTGTGGTGCAACTTTCCTTTGCATGTTTTTAGATACTTGCAGAATAACAATTTCTAAT--ATTTCTAAATTTTTGAATTCTAAC--TGATTTTAAAAGTTGCTT---ATTTAAAGAAGTAACCTGCATT-----------GAGGCATTGCTTCATAA--------------------AAGTCTGTTCTTT--GTCATACAGGCCGATAGTATGCCTGAAATGCCACCAGAAACAGTCACAGAAGAACAATACACAGATGAACATGGCCACACAGTGGTGAAGAAGGTATTATCAGTTACACCC ...xx....x..x.::..x.x..x....:.x:.:..-------::..:.xx.xxx..x::.:.xx....:....x..:..:.:........x:.....:..:.......:.....x........::x......:........x.x...............:.....:..:..x..:................:x.x...x:...x.......:.--------::.x..x:.:.x:.x:xx..:x..-..:.......-------.....---...x.-------...:x:::...x.:.-..:....x.-:..:......::....---.:::.:...-----.:...x...xx..:.:..x--...x:.:x::x:.:..xx..x....:..-------.:xx:.:x....::..:..-----------:..xx......----..x....x::.x....:.xx....x::x:..xx:x.:.:....::x:.x.--------.:.x....xx:.:.:....xx.......x...xx:.....---------.:...:.x.:--:..xx:.::x.....x..:::.:.--..x..:.x..x:.:..:.---....xxx:.x:.xx.:::....-----------.::.:.x.x.:...x..--------------------:.x:..x....:.--::::.x:...xx..:::............:..x.....................x......:x.....:.....x.....x.....:...........:..x:x..:.:.. 36M7D171M8I24M1D10M7I5M3I5M7I15M1D9M1D16M3D9M5D19M2D28M7I19M11I11M4D50M8D40M9I10M2D24M2D18M3D22M11D17M20D13M2D111M 452/682 66.3% 734/94230402 0.0% 124/682 18.2% 77438275 NA +10838 chr4 + 190214555 113373280 113373279 113373455 176 TTCAGGTTACTAGGAAAATCATTAGGCGGTATGTATCCTCTGAAGGCACAGAGAAAGAAGAGATTATGGTGCAGGGAATGCCACAGGAACCTGTCAACATCGAGGAAGGGGATGGCTATTCCAAAGTTATAAAGCGTGTTGTATTGAAGAGTGACACCGAGCAGTCAGAGGTGAGA chr4 - 94230402 35936485 35936484 35936660 58293743 58293742 58293918 176 TTCAGGTCACTAGAAAGATCATCCGGCGATACGTTTCTCCAGATGGCACTGAAAAAGAAGATATCATTATGCAAGGAACACCACAAAAACCTGTCACAGTTGAAGAAGGAGACGGCTATTCCAAAGTTGTAAAACGAGTCGTGCTGAAGAGTGACAGTGAACAGTCAGAGGTGAGA .......:.....:..:.....:x....:..:..x..::.x..x.....x..:........x..:..x:....:....::.....::.........xx:.:..:.....:..:...............:....:..x..:..::............x:..:............... 176M 137/176 77.8% 176/94230402 0.0% 0/176 0.0% 77436795 NA +12763 chr4 + 190214555 113374727 113374726 113374949 223 ATCAGACATTGTCTATTGTGTGTCCTTCGATCATTAGGTCACTTTGTGTGAGCCCAGCATTTTGTCCAGTACCTCACAATTTCAGGCTGAGCCAGTGGAAGGCCGTAGAGTCAGCAAAGTTGTTAAAACAACTGTGGTACTTGGAGAGAGGATGGAGAAACATCTGGGGGATTCTAGTTTAGCCACTGATCTTCCTTCAGCCAAAGATGACTTTGAAGAGGTA chr4 - 94230402 35938449 35938448 35938665 58291738 58291737 58291954 217 ATCCAACCTAATCAATTTTCTAACCTTC------CAGGTGACTTTGTCTGAACCTGGTGTTTTGCCCAGTGCCTCCAATTTCCAGTCTGAGCCAGTGGAAGGCCGCAAGGTCAGCAAAGTCATAAAAACTACTGTAGTGCAAGGAGAGAGAATGGAGAAACACCTGGGGGATGCTAGCTTAGCTACTGATCTTCCGTCGGCCAAAGAGGACTTTGAAGAGGTA ...x:..x.x:..x...x.x.:x.....------:....x.......x...:..::.::.....:.....:....xx.x..:...x...................:.::...........::.x.....x.....:..:.xx........:...........:.........x....:.....:...........x..:........x............... 28M6D189M 173/217 79.7% 217/94230402 0.0% 6/217 2.8% 77436278 NA +7145 chr4 + 190214555 113378073 113378072 113378197 125 TTTTCTTCTTACTTCAGGCTTTGAGTTACACAGGTAGCCACATGAAAGTCCACTTACCCAGTTTAGTAGAGAATGAAATCCTGAAAGAGGATGGATCAATAATTAAAAGGTTTGGGTTAGCATGG chr4 - 94230402 35939658 35939657 35939782 58290621 58290620 58290745 125 TTATGTTTTAATTTGAGGCTTTGAGCTATACAGGCAACCAAATTAAAATCCAACTCCCTGCATTAGTAGAGAAGGAGATCATGAAGGAGGATGGATCAATTATTAAAAGGTTTGGCTTGGCATGG ..x.x..:.x.:..x..........:..:.....:.:...x..x...:....x:.x..::xx...........x..:...x....:..............x..............x..:...... 125M 98/125 78.4% 125/94230402 0.0% 0/125 0.0% 77438415 NA +67498 chr4 + 190214555 113381430 113381429 113383760 2331 AATTCTCTCTTGTCTGCTTT-TCTCCAGGACAACAATGAGTAAAGCCATCACACAGAAGAGGGCTGTGGTGAAGGACCAGCATGGAAAACGCATTGACTTGGAGCACCTGGAGGATGTACCAGAAGCACTAGACCAGGACGACCTCCAGCGCGATCTCCAGCAGCTCCTTCGGCATTTCTGCAAGGAGGACTTGAAGCAAGAGGCCAAGTGAGGGGCTGCCCAGTTCTCACACCAGAAACCACACATTCACTCAATATGCAGCTTCCTGTTTCAGTAGGGG-------AGTGACCTAACTGGCCTAATTAATGGGATACCCCGACATTTCCACTGTTAGCAAATATACGGCATTTTGCTTTAGTTTTCCCCCA-----------------------TCCTCTTTAACTATAAAGCTAATTTGTGACCAAAGATGGCATCCTTCATACTGGATGCTGTATCCAATACTTTGTTGTGTCTGTGCTAACCTGGGAACTGGC---CACCTCCATT--------GTTCTTTGCTTCTGCACAAGATCCATGAAAATCCATTGATCAGAAGAACTTCACCTGCAGACCTCTTCAAGTGACACTATGTAGGAATCCTTCCAA---GGAATATCTATGTACAATGTATATAGCTGAAATGCTCAGATGAACAACATATTAAAAT---TAAAAC-CACTGCCTATTGTAACTACACTGGGCATC--AGAATAAAAGGCCTCTAGAAATTGCTGAACAATGGTTAATTAAGATATTGCTAACACAATCGAGTGATAATACAGTTTTACTGCAAAAGAAGCACTTCAAACCTATTATGTCCTTAGAACTTCCAGAGTAG----CCACTGCTCCCAGTTAAAGG----------TGGGTCAGTAGCCTTGCAG---AACTGTCCTGA-GAAGTTATTGCTGGTGCTGGCCAGCCATGGCTT--AGGACTCC-AACAGCCACTCTGAGGG----AGGGGAGAAGGGAGCAGAGGCCACGCAGAATGAACCGATGGGGTATTCAG-TTGCTGGCAGCTACATTGTGTGGCATTCTAGCA-----TCTTCAGGTCTTTAGATCTTGGACAAGTTGGCAGGGTATTTTAAA-AGCTATAACTACTGTAGTTTTCCAGTTTTCATTGCTGCTTTAGCAAACCACGCTGTCTTACAGTGGTACTTTCTTCTGGCCACTGCACTGTAGATAATTCATTGGAAACAAGATTTACCCACTACATAAAAGGTTAAACTCCTTCAGTATGTTGGAGTGGTTTCTTTTTTTTTTTCTTTCTTTCTTTTTTTTCTTCAGGTTTATATCTTCTCTAATACCTGCATGTGGCGTTTAAAAATCAAGACCACGGTCAAACCCCTCTTCTAATCACATTAATTGTTTCCATTCTTTTTA-CCCTGAGTGAGCACTTTTCACTTTCCAGCTAGGTCTGTTTTTCAGCTTGCAGACAAGATTGAGAAA----------TCCTTGAAAATTTGGTTTTGGTTAAAATTTTTGGTTTATTTA---------------TTTGAAATCCACACTCCCTTGGAAACTCTTAAGTGCATTTGTGCACTTCTGTTTGTTTGTCTCAAAGAAGGGACTGTAACAATCTGAGTAATTTCCATGTCCTCTTCCTTATTCCTCTAGTGGTTGAAGCTGTGTAGCATTTTAACATATA-TATATTCACAAATATATTCATATAAACAGTATACATTTTGAATCAGTCATTTG-----TTAAAGAAAAGTATATTCAATGAAGATGAAATTTAAATAAAAAAGGACAGAGTCTATCCTCCAGGGATTGAACATTTTCCAA--TTATCTGGTCTTTTCCTGTT---------GTGCAAAAATGACTCATTGCTCCGAATGTCAAAAACAAATGCGACAAACAATGGCACTTCATCATTTAAAGTAATGTTGCCAAGAGAA--AAAATTTCCTGGGAG-GGAGGTTTCCCACAAGCCAAATCTCCTAAGCCTCAAATGCTAGCACT---TTTTGGCAGTTGGATAG-GAAATGAGACATTCTTTGGCAGCCAAAATAAGAGAGGCCGATGGTGAAACTTTTTGAGACAC-CCTATGGCCTTC---TTGTCAAAAC----------CTTC---ACTGGAGCTC--AAGAAAAGCATTTCTGTTGTGTTATTTGCAGTGCAGATGATG-TCTGTGTAACAACATAATGGTTATTCACCTTT--TTTTGATTTTGATTTTTGCTGTGTTATCAAA-AACTTGAATACTGTGAGAAGAAGTGAATTTTCAGTTGACGAATCAGCATCTTGTTCCCATGGTGATAACACTAATTGAATATATCTATGAGGGCATGTATTAGTTAATGGAA---AAAAAAATACAACACTAACAATACATAGCTGCAATGTGTACAATGGCTGATTTAATTAAAT-AAAATGTACAAGTGTTAAATGTGGCAACGGTGATTTGTTCTTCTTTA chr4 - 94230402 35941203 35941202 35943506 58286897 58286896 58289200 2304 AATGCTTTCTCATTCTCTCTCTCTTCAGGACAACACTAAGTAAAGCCAGCACACAGAAGAGGACTGTGATGAAGGATCGGTATGGAAAGCATGTTCACATAGAAGAGCTGGATGACACACCAGAAGCGCTACCACAGGATGACCTCCAGCATGACCTTCAGCAGCTTCTTAGACACTTCTGCAAAGAGGACTGGAAACAGGAGGCAAAATAAGAAGCTG-TCACCCCTCA-----------ACATGTCCATCCAGTATGCAGCGTTCATCTTTTCTAGGTGTAGACATTATGACCTA-----CATAATCACTGGAAGACACTGCCATTTCTACTTGT-GCAGATGCAGTGAATTCATTTTT--TTTTCCCCCCTGTATTTGATTTCAGGTTTTTGTTATTTTTTACCCTGTAAGCTAATTTGTGACCAAAGATAGCATCCTTCATTCGGGATGATTTATCCACCAA-TTGTCGTCTTTGTGCTGTACTGGGACCTTGTCAGCATCGCCACTTTTTGCCGGTCCTTTGCTTCTGCACTAGCTTCCCAAAACTGCATTTGTCAAGCCAACTTCATCTACAGGCCTCTTCAAGTGACTATGTACAGGCATCATGAAAAAAGGGAGTTAACATGTAAACTGTATATAGCAAGAGTATTTGGAC---TTACTTATGAGACTGCAGAAAACACGCTGCCTA---TGAATACTATTAGCGTCGTGGATTACAAGGTTTGTTGACACTGGTGAGCAACAAC------AAATAACATTAACACGATCAACTGCGAACAC----TGACTGAGGAGGAAGCACTGCAGATCTACTGCATCCGTAAGACTTCCAGTTTAGGGATCTATTA-TTATAGTTAAAGGCTCTAAGAGTCAGGCTAAAAACCTGGAAATTCAGCTGTTCTCATGAAGTACGAGCTGACTGTGGCCATCGATGCTTTTCAGACCTTTGGACAGCCACTTCAAGATTTCCAGAAAAGAAAAAAAAAAAG---AATTAAAAATATCCAATTAGGTAACCAACTTGCTAGCAGCTATATC-TATGGCACATTTGCATACGGTATTAAAATCTTTTAGATCTGGACATG-TGGCAGGGTGTATTAAACAATTATAACTACAGTAG-TTTCCTGTTTTCATCACTGCTTTAGCAAACCACATTGTC---------------CTGCTGGCCACTGCACTGTAGATAACTA--TGGGAGAAAGACTTA--CACTATATGAAAAGAATAATTAATTCACCATG-------------------------------------TTTTAATCAAGATCGCCTCTTATCCGATACATGCATGTGGCATTTGAAGGTCAAAACC-------AAACCCTCCTGTAATCATGTCAACCTACTATAGCCCTCTAAGCACTGAGTGAGCAGTTTTTATCTTCCAATCAAGTGTTTTTTTAAA---------------GAGAAAGTGCTCACTGTCCTTGAAAGCCAGTTTCTGTTCATATTTTGTTATCTATCTCTATATGATATGTATTTCTAAAATTGACCCTCC---GAAAAGTCATGATAGCATGTATGCACT--------TTTACTTTAAAAAAGGGAACATAAAGATCTGA-CATTTTTGGTATCCTATACCTTAAT-ATTTAGAGGTGAGCACTCTGCAGCATTTTAGAATGTATTACACATGCAAACACACTTA------------AGGTTTTTAAACAGCTGTTTGATTTTTTTTTTAATAGCATACTCAAGAA----------CAGATCAAAA---GCAATTCCTCTCCTTTAAGAGTAATGCTTTTCCCAAGCTTACCTGGCCTTCTACAATTATAGTTTGGGTTTCTGACTCACTCAGTGCTCAGA------------------ACAAGGAAGGGCACATC-TCA-TTAAAGTAGCGATGCCAAAAGCATGGGCACACCTTGGGAGCTGAGGCTTCCTGCAGGCAAAGCAACTTGAGGTGC-CATGCTAACACTTTCTTTTGGCAGGCAGGCAGAAAAAAAAGAAGTGTTTTGGCAGCCAAAATGAATGAGACCCTTGATGAAACATTTCACGATACATCGATGGCTTTCTTATTGTCAAAGCACAGGATGATCTTCAAGAACGGGGCTCTAAAGAAATGCATTTCTGTTGTGTTATTTGCGGTGCAGATGATGTTCTGTGTAACAACATAATGGTTATTCACCTCTTATTTTGATT----TTTTTGCTGTGTTATCAAAGAACTTGAATACTGTGAGAAGAAGTGAATTTTAAGTTGATAAATCAGCATCTTGTTCCCATGGTGATAACACTAATTGAATATATCTATGAGGGCATGTATTAGTTAA--AAATTTAAAAAAATACGACACTAACAATACATAGCTGCAATGTGTACAATGGCTGATTTAACTAAATAAAAATGTACAAGTGTTAAATGTAGCAACAACGGCTCATTCTCTTTTA ...x..:...::.::x..:.-...:..........x.:..........x.............:.....:.......:.:.:.......:.:::..x..x.:..:x.x.....x..:::.........:...xxx.....:..........::..:..:........:...x.:..:........:.......x...:..:.....x..:.:..::....-:..x::....-----------...::.:..::..:........x.:.xx:..:xx....x.-------x:.......-----.x....:.x...:.x..x.:.x......:...xx.-...:..::.xx.x...:xx:...--.........x-----------------------.x:.:....x.:xxx......................:...........x.x.....x.x......x:.x-....:..x.:......:xx......x..x.:---..:.x...:.--------..:..............x..x.:.x::...x.x....x:...::xx.......:..:...:..............xx.:.::...x...x.xxx..---...:.xxx:.....x.x..........x::.:.::.::..:---:x..x...x.:.x.---x.....-.:.......---.:.x...xx.x:..:..--:..x..x....::.x.x..x.:..x...:...::::------.:...x:::......:...:.x..xx..:..----.x....x::.:........x..:.:...:.:::...x..::........xx...----.:.:.:-.:x:.........----------::..::.:x.:...x.x.:---.:....:..x.-.....xxxx....::xx......x.x...x:..--..:x..::-:.........:::..:x----..:::....:::.:x.:..---.xx:.:..xx.x..:..x:....x:..:-.....:.......:..:-.:.....:x:.x...-----.x..x.::.....x::x::......x.-.........:.x.....-.::.........x....-.....x........::.................::....---------------..x......................:.x--...:.:x....:...--.....:..:...:.xxx..:.xx....x:...-------------------------------------....xx...:.x.:::x....x..::....x..........:...:..::....:...-------..x.....:.x......::.:..::xx:.x:.x:.:.:.x.-.x...........x....:.::.....:::.:..x.x.....x.:---------------......----------.........:::x.x..:..x.:.x.x...x.x:.:...:.x---------------.:.:....:x..x....---.:...x..x.:.xx....x.:......--------...:::.:...:......x::...x:......-:.x...:x:.:....x.x.....x.-x.:...x...x::x:..x..:.........:x..:..-..:.:x::....:.:.:.:.------------.x:....x..x...:::....-----..xxxx..x..:...:....x:.----------:.:..x....---:..:xx:..x....::.:.::.x:x:.x...:....--...:....:...:.x.x:..---------..x:xx:.x.x.....x.....x..------------------....:x..x.....x..-...-........::.x......:..x.--::x.:x:.:......-x....:....::..:..x..::xx.:.:..x:x.-x......:....---.........x::.::..-:...x:...x:.x:...............:.:x...:..xx..:......x...::x..:..-:.x.....:...---........:.----------....---.x:..:....--......x......................:............-..............................:.--........----...................-...............................x......::...................................................................--:..---..........:............................................:.....-......................:.....:::.::.::....::.... 20M1I198M1D10M11D40M7I9M5D35M1D23M2D10M23I70M1D31M3I10M8I96M3I41M3D14M3I6M1I9M3D17M2I36M6D31M4D54M4I6M1D13M10I19M3I11M1I33M2I8M1I17M4I19M3D28M1I17M1D15M5I27M1D17M1I17M1D39M15D28M2D15M2D32M37D58M7D41M1I45M15D6M10I42M15I17M3D27M8D32M1D25M1D37M1I20M12D21M5I23M10D10M3D36M2I20M9I25M18D17M1D3M1D23M2I15M1I34M1D12M3I17M1I62M1I12M3I10M10I4M3I10M2I42M1I32M2I8M4D19M1I107M2D3M3I61M1I47M 1556/2144 72.6% 2304/94230402 0.0% 347/2144 16.2% 77440227 NA +3079 chr4 + 190214555 113382576 113382575 113382704 129 TTTACCCACTACATAAAAGGTTAAACTCCTTCAGTATGTTGGAGTGGTTTCTTTTTTTTTTTCTTTCTTTCTTTTTTTTCTTCAGGTTTATATCTTCTCTAATACCTGCATGTGGCGTTTAAAAATCAA chr4 - 94230402 4168271 4168270 4168397 90062006 90062005 90062132 127 TTTACCTGTCTCATAAAGTATCTCACTCCCTAAGCAAAGTGTAAAGTTTTCTTTTTATTTTTCTTTTTGTTTTGTTTGTTTTCTAG--TGAACCGTAACTCATATCTCACTGTAGAGCAAAAGAAGCAA ......::::x......:x:.:xx.....:.x..:.x:x..x.:x.x.........x.........:.x.:..x...x.:...x:.--.:x.:.x.xx..x...:..xxx...:.x.:xx..:..x... 86M2D41M 79/127 62.2% 127/94230402 0.0% 2/127 1.6% 109214305 81000250 +3362 chr4 + 190214555 113399336 113399335 113399408 73 ACACAAATACACATATACATATACATGCCTGCATATACACACAAACACACACATATACATACACACACTGATG chr4 - 94230402 14964819 14964818 14964889 79265514 79265513 79265584 71 ACACAAATATG--TTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTG .........::--.x.:.:.:.:..::.x..:..:..:.:...:x.........::...:..........x.. 11M2D60M 51/71 71.8% 71/94230402 0.0% 2/71 2.8% 98434517 91780038 +3193 chr4 + 190214555 113418625 113418624 113418707 83 CCCTCTCTCTTTCTATTTCTTCCCTCCTCCTTCTTCTTTTTCTCCCCCT--CTCCTTCCTTCCTCTCTCTCTCTC---TCTCTTATCA chr4 - 94230402 18501286 18501285 18501373 75729030 75729029 75729117 88 CCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCCA ....:.x:.....:..::.::...:..:...:...:......:....:.--....x..:x:xx.:.......x:.---......x:.. 49M2I24M3I10M 58/83 69.9% 88/94230402 0.0% 5/83 6.0% 94917339 NA +7364 chr4 + 190214555 113420328 113420327 113420483 156 TACCTGGCAGGGGAGATACCATGATCACATAGATGGTTTTCCCATGGCAAGTCTTATCCATTGCACTCTGGATGTGCTGACACCTGTGATTT--CACCAAATGTGGGAAACTCAACTGCATAATTTGTGGTAGTGGGGGATTTTGTTTGTGCTTTCCC chr4 - 94230402 30110549 30110548 30110705 64119698 64119697 64119854 157 TGCCTGGCAGGGGAGACACCGTGATTAGGCAGGTGGTTTTCACAGCAGGAGGCTCATCTCCTACACTCCAGGTGTGCTGATCACTGCAATTTTCTCTCAAATGAGGGAAACTT-GCTGTGTAATTTGTGGTAGTGGGGTACTGTGTTCATGCTGTCCC .:..............:...:....:.x::..:........x..xx:x:..x..:...:x:.:.....::.:........:xx...::....--:x:......x........:-:...::..................x.:.x....::....x.... 92M2I19M1D44M 113/155 72.9% 157/94230402 0.0% 3/155 1.9% 83309779 NA +4083 chr4 + 190214555 113422914 113422913 113423084 171 AGATCTTAATTTTGGTTTGTAGGTGATAAAAATTTGCCTGATTTTTATCAGTCATGGATGTTTTCTGTGTTTTAAGTTATGCAAGCCTAGTCATAATGTCTGTTTTGTGTGTGTGTGTATATATATATATATATATACATATACATATTTGTATGTATTTTTATTGTGTGT chr4 - 94230402 19559216 19559215 19559356 74671047 74671046 74671187 141 AAATCTTAATTCTGCTTTGT---TGTAACTTATTTAACTTATTCCT--------------TCTTCTGCATTTTTAATTTTTT----TTAGCTAT----TTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-----ATTTTTGTATATTCTtgtggtgggt .:.........:..x.....---..xx.xxx....:x..x...::.--------------.:.....::....x.:..x.x:----:...::..----.:.x................:................:.xx..-----....x.:.:....:..:.x...x.. 20M3D23M14D22M4D8M4D43M5D25M 104/141 73.8% 141/94230402 0.0% 30/141 21.3% 93863698 NA +3201 chr4 + 190214555 113423071 113423070 113423125 55 TTTTTATTGTGTGTGTGTGTATATATATATATATGTATTTTTATTTTTGGTGGAT chr4 - 94230402 19559289 19559288 19559343 74671060 74671059 74671114 55 TTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT .....x..............:.............:..:xx:..x....x..:x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 93863782 NA +3827 chr4 + 190214555 113440105 113440104 113440200 96 TGCATGGTGTGATCTTGGCTCACTGCAACCTCTGCCACCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGCAGCTGGAATTACAGGTGCAC chr4 - 94230402 18197110 18197109 18197199 76033204 76033203 76033293 90 TGCTTGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...x...::.x..x..------..:..:..:xx:x.x:...........:.x...x.xx.x........:.....:........:....x...... 16M6D74M 66/90 73.3% 90/94230402 0.0% 6/90 6.7% 95242995 NA +3450 chr4 + 190214555 113441105 113441104 113441177 73 ACATAAATTGAATCAATAATTAATTA-----CCTCAAAAAAAAAAAAAAAAAAAAGAAAGCACCAGGACCATGGTTTC chr4 - 94230402 85517729 85517728 85517806 8712597 8712596 8712674 78 ACACAAACTGAAGAGGTAATAAACCAATAAACCTCACAGAAAAAAAAGAAAAAAAAAGTACATCAGGATCATAGTTTC ...:...:....xx::....x..::.-----.....x.:........:.......:.:x:..:.....:...:..... 26M5I47M 54/73 74.0% 78/94230402 0.0% 5/73 6.8% 27923376 NA +3176 chr4 + 190214555 113443833 113443832 113443938 106 CTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTCTTCT----------------TTCTTCCTTTCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTT chr4 - 94230402 9693714 9693713 9693835 84536568 84536567 84536689 122 CCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .::....x.:.x.........:xxx.x...:xx..x..----------------........:..:.....x....::.::.:x.:.::.x.:...x.:x..:.........::.:.::... 38M16I68M 69/106 65.1% 122/94230402 0.0% 16/106 15.1% 103750119 86464436 +3066 chr4 + 190214555 113443844 113443843 113443911 68 TTCTTTCTCTCTCTTTCTTTCTCTTCTTTCTTCCTTTCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTT chr4 - 94230402 9693768 9693767 9693835 84536568 84536567 84536635 68 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .....:.....:.....::.:.:.....:x:.:.:.x:.:..x:xx...::........:...::... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 103750076 86464479 +3564 chr4 + 190214555 113443849 113443848 113443997 149 TCTCTCTCTTTCTTTCTCTTCTTTCTTCCTT-------TCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCTTCCTTCCTTCTTTTCTTTCTCTCTCTCTCTCCTTCCT chr4 - 94230402 4731642 4731641 4731796 89498607 89498606 89498761 155 TCCATCACATCCTTGCTCTTTGTTCTCCTCTGTAAGACTCTAATTAATCTTTCCTCTA-CCTATCTTCTTTTTCTTTCATTCATCTGCTCCCTCCCTATTTGCTTTTTGCTCTTCTTAATCCTCCTGCATTTTTATTCCCTTCCATTTCTTTTCCT ..:x..x.x.:...x.....:x....:.::.-------...xx..x:::..:.:...x-...x.:......:......x..:x.:.x:.:.:.:.:.x:..x....:.x.::.:...xx....:.:x:x....:x...:..::.x:.::::..... 31M7I20M1D97M 89/148 60.1% 155/94230402 0.0% 8/148 5.4% 108712207 81502348 +3473 chr4 + 190214555 113443856 113443855 113443958 103 CTTTCTTTCTCTTCTTTCTTCCTTTCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTCCTTCCTT chr4 - 94230402 28866462 28866461 28866566 65363837 65363836 65363941 105 CTTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACCTTGATGTTTTTCATTTCTT ...:..x..x:..:..:x.::...:...xx.:x.....:x.x......:.....:..x.:.......xx.x..:....:.:.:x.:..--:x..:...x..:... 88M2I15M 68/103 66.0% 105/94230402 0.0% 2/103 1.9% 84577394 NA +3641 chr4 + 190214555 113443867 113443866 113444009 143 TTCTTTCTTCCTTTCTCTTTCGCTTTCCTTCTTTCCTTTTTTCTTTCTCTT----TCTTTTCTTTCTTTCTTTCTTTCTTTC----TTTCTTCCTTCCTTCTTCCTTC-CTTCTTTTCTTTCTCTCTCTCTCTCCTTCCTTTCTTTCTCTTT chr4 - 94230402 91731746 91731745 91731897 2498506 2498505 2498657 152 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCT ..::.:x..:......x:..:..........:::.:.::.....::..:.x----...:...:x.:.:..:.:.:..x.:..----...x..x..:..:x::....x.-...x:.x:.x.:x:.x...:.:x.:x....:....::x...:. 51M4I27M4I22M1I43M 88/143 61.5% 152/94230402 0.0% 9/143 6.3% 21712121 NA +3156 chr4 + 190214555 113443912 113443911 113444073 162 TCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCTTCCTTCCTTCTTTTCTTTCTCTCTCTCTCTCCTTCCTTTCTTTCTCTTT----------CTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT-CTTTCTTTCTTTC chr4 - 94230402 8174008 8174007 8174180 86056223 86056222 86056395 173 TCTCTCGCTTTTCCAAATTTCTGCTTTTTTCTCATCCTCTGCTAATTTTTCTCCACTTCTTTATTTTCTTTTTCTCGCTTCCTACTCCTTATTTATTTAAGATAAAAACCTCCAAATAGCTTTTCTTCCCTATTCTGGGTTTCTTTCCCCATCCCCTCTACTCCCTGTCCTTC .....:x......:xxx.....x::...:.:..x.:..::x:.xx..:...:::x.......x:.....:.:....x..:.:.x..:::.x.:.x...----------.:.:.xxx.xx:..:.:.:::::x....xxx........:::x.::.:.:.-..::..x..:... 98M10I51M1I13M 93/162 57.4% 173/94230402 0.0% 11/162 6.8% 105269904 84944651 +3301 chr4 + 190214555 113443971 113443970 113444108 138 TTTTCTTTCTCTCTCTCTCTCCTTCCTTTCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCT-TTCTTCTTTCTTTCTTTCTCTTTTTCTTCT chr4 - 94230402 28459067 28459066 28459202 65771201 65771200 65771336 136 TTTTTTTTTACTGACTTTATTATTGCTTTCTGTAC--TCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGT-TTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCT ....:...:x..xx..:.x.:x..x......x.x:--.:...x..:x....:..::.:::..:.xx:x...x.-....x:...xx:.:.......:.::xx.:...x.-:.:....:.....:x..........:.:.. 35M2D36M1D34M1I30M 86/135 63.7% 136/94230402 0.0% 4/135 3.0% 84984904 NA +3540 chr4 + 190214555 113444006 113444005 113444098 93 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTC chr4 - 94230402 32546770 32546769 32546868 61683535 61683534 61683633 99 CTTTTTCTCCACTCCTTGATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTTC ....:.:..:x:.:...xx.x....:..x.------.x.:.x.:.:...:......x............:::x.x.:....:.x:......:....:.. 30M6I63M 64/93 68.8% 99/94230402 0.0% 6/93 6.5% 80897236 NA +3060 chr4 + 190214555 113444012 113444011 113444095 84 TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTT chr4 - 94230402 15963352 15963351 15963435 78266968 78266967 78267051 84 TTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ..x.:...x.x::.x...xx::..xx.x......:.......:.......::.:..xx...:...:...xx.....x...::.. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 97480660 92733895 +48165 chr4 + 190214555 113452409 113452408 113454540 2132 CGCACTGTCAGCAGAAATCACAAATTTATTAACTCTTAAATATATCAATCAGTCCTTTACCATTATGGCAAGAAATATATACA--GTGTCCCATGGTAAACTGCAGTGTTTCAAAATGATAGAAGATAATAAATGTGTAATTCATTTGTGGTGGAGAGAACAAATCACAATTTCCTCACATCTTAGTGCGGAAGACAAACTTGATCTACAGTAATACTTCAACACCACATGCTAAGTTAAAAGTGT------AAAAAAAACACTCTACATCTATTTTTTTTTCTTTAAATACATGTATGCCACGTATAGCTGCTTCAC--------------------------------------------------AAAAGGGTAAAAGAAATTAAAAAGAGAAAAATGAGGCCATTA--TTTTTTCACAGATCTCATTGGCAGGTTAACATGGCTCAATATATTTACTGTATATATTTATTTTAAATATATATGTTGTTTTAAATTGTGTAATAATTATCAGAAAAGCTTCAACCCATCTACCATACATCCACTAGCAATAATATC--------TAAGA--------TGATTAGTAATCAACACAGAGAGGTGAGATGAGAGAAAAGAGGAAGGGTTGTTTTTGTTATTTTGTTTTTCTTTTTTGCTTCTGCTTTAAAAAT--AGGCTTCTGAGGACTGTGAA-TTACTATCGTTAAAATAACAATGATGGAGATTCCATGCACTGTAAAGCACTTCAGGGAAGAG--AACAAAAATCACAGGAATTGAATCAACAAAGGAAAAATGAGAAGCACAAAGAAAACCTAGGACATTTCCCTTTTTGTTTTAAACTGGGA------AATTCTAACTCCTTGGAGGAAGACAATGATACTCTGATTCAAGAGAGAAGCTAAAAAAGCACAAGTCACAAAGATCAAGTTC--AAAACACTTATGAGAATG---------------GCAAACATTTGTAAGCCTCTCTAACACTAG------AAAACTAGCTAGTGATGATGCAGAAGTGACC----------------------------CTTTCATTCCCCA-----AGGCGGAGGTGAGTGCG--------------TTTGCATAAAA-----CCCCCTCTGCTATCAAGTTGGTATCCTCCTGGCAACTGTCCCAATCAGTAAGACGTTGCAGTCACAGGAGGAACTTGCTTTTATCCTAACTTTAAACAATG-----CAAATACCTCCAACATAGTTAGGATACCTAAGTCCAAACTAGAGCTTAAGCAGAATTATAAAC--CTTTAAAA---TCTTGACAACATTTTTGTGGGCCCTGAAGATGATCAAAAGTGCTAGTATAGCTACCTTCAAAA--------------------GACTTTTATTTCCCTTTTACATTCATTATGCAAATTTCACTTCTATTCTTTTCTC----ACACACTACTAGCCAGCCTCCCCAAAAAAGGAAAAGGGAAAAAAGTAAGAAAAGAATGGAACAAAAGAAAAATAAGAAAGCAAACGAAAGGAA--CAAAGAAACAGGATAAAGAAAAGAGATCACAGATTTGAGAAAGAAAAACAATTCAATTCAGCAAATTCACCAAAACAATGTGAATATATCCTAAAGTGATTAAACTCAGAAATGATGTGAATTTTTCCAGTTTACACAGTTTGACCAAAAACAGCATGGCTTTATGTGGTAGCAAACCAACTGATTCTTGCTTCTACTTTCATAAGTGATTTTGCCCAC-------ATATCATCCCACTTTAATTGTTAATCAGCAAAACTTTCAATGAAAAATC-ATCCATTTTAACCAGGATCACACCAGGAAACTGAAGGTGTATTTTTTTTTTACCTTAAAAAAAAAAAAAAAAACCAAACAAACCAAAACAG--ATTAACAGCAAAGAGTTCTAAAAAATTTACATTTCTCTTACAACTGTCATTCAGAGA-ACAATAGTTCTTAA----GTCTGTTAAATCTTGGCATTAACAGAGAAACTTGATGAAGAGT-TGTACTTGGAATATTG--------------TGGATTTTTTTTTTTGTCTAATCTCCCCCTATTGTTTTGCCAACAGTAATTTAAGTTTGTGTGGAACATCCCCGTAGTTGAAGTGTAAACAATGTATAGGAAGGAATATATGATAAGATGATGCATCACATATGCATTACATGTAGGACCTTCACAACTTCATGCACTCAGAAACATGCATGAAGAGGAGGAGAGGACGGCCCAG--GGTCACCATCCAGGTGCCTTGAGAACAGAGAATGCAGAAGTGGCACTGTTGAAA--TTTAGCTGAAAGGAGAAAGGGGGAGGAAGA chr4 - 94230402 35970286 35970285 35972416 58257987 58257986 58260117 2131 CACAGTGTCAGCAGAAATCACAAATTTATTAATCCTTAAATATATCAATCA----TTTACCATTATGGCAAGAAATATGTACACTGTATCCCATGGTAAACTGCAGTGTTTCAGAATGACAGAA--------ATGTATAATTCAGTTGTGGTGGAGAGAACAAATCACAATTTCCTCACATCTTGGTGTGGAAGACAAATTTGATCTACAGTAATACGTCAACACCACATGCTATGTTAGAAGTATATTAAAAAAAAAAACACCCTACAACTAATTTGTTAATTTTAAATACAGTTATGCCACTTATAGCCGCTTCACCaaaaaaaaaaaaaaaaagaaaaaaagaaaaaaaaaagaagaaaaagaaaaaaaaaGGTAAAGAAATTAATGAGAAAACAATGAGGCCATTACTCTTTTTCACAGATCCCATTGGCAGGTTAATATGGCTCAACACATTTATTGTAGATGCTTATTTTAAATATATA--TCGTTTAAAATCATGTAATAATTATCAGAGAAGCTTAAATCCATCTACCATACATCCACTAGCAACAACATCAAAATGTTTAAGAACTGCTTTTGATTAGTAA-CAACACAGAAAGGTGGAATTATACAAATCAGGAAG------CTTTCCCATTTTAT-----------------------AAACTTCAGGCTGCTGAG--TTGTAAAGTTTTCACTGCTAAA--AAGAAC-ATTGAGATATCATGCACTATACAGCGCTGCAGAAAACAGTTAGCCCTGTTGGTAATAAAATAATTAACAAATGAAAA-----------AGAAATAACT---GATCCCTGCGTTTTTCTATTAAAATGGAAGGGAATAAACCTAGATTCTTGCAAGGATGTACTCTCAC-CGGCTGTGTAAGGGAAGCAAAAACAGTCCCTGTCACAAAGTTTGTGTTCTGAAACCACAT-TGAGAGCATTCCCTGCACAGTGTACAGACATTCGCAG------CTAGGGATAAAGAGCCAAAACAAACTAGTAATGCTGCAGAGATTGTTGTCCTTGATACTGTATGCTGCCTGATGATTTTCATAAACCAGGAGCAGACTGAGGGGGAAGAGGAAAGAAAAACAAATCTGTGGAAAAGTATTACAGCCTTACTAGAAAACTGGTGTAGATATAATACATTTCCAGAGAAGCAA-------CAACAACATTGGAAAGTAAACAAACTCCTCATACTAAGCTATTAAGGCCTAATACTTCTAGAGTATATTAACCACTGAAGT--GGTCTATAGCTTAAACAAAAATGTAAAATGCTTTAAAGACTCCTTAATAACTTTACAGTGCACTCTAAAAGTGAT-AAAAATCTATTTTTAGATCTCTTTAGAATCTGTTTTTAAACAAAACCTGCCTCTCAATTGTCACTTA-GTTCCTTATG--ATTTTTAATTCTGATTAATTATCCAATATAAATTTTCATTTAGCGT---------------------------------------------------AGTAAGAAAGCAAAGGTAAAAACTTCAATGAAA-------------------------------AAAAAAGAAGAAT--------GCTGACTAACCAGAATATGGACAGTTAATCCTGAAGTAATCAAGCCAGCAAATTACA-ACATTTTTCCAGTTGACACAGACTAAT--AAACTAAGAAGACTTCAGCTGGTACAAAGCCAAGATATTATCACTTCCCCATTTATCAGTGATTTTGTCCATCTACAAGATATAATAAAAATCTGTTTTACAGT-AACAGAGCTGCCAGCAGAAATCCTAACCACTCT-ATCAGAATGAAAGCA--AAATCCAAGGAGGACTC----------------AAGGGAAAAGGAGTCAA-------AAAACAGTTCTTAAGAAAAGAGGGT-----AAAATGTAT-TTTTTGTTTCTTTTCTTTTTTATAAATAGGATAGTTTTTGAAGTTGGCTGTTAAAACTTGGCATAAATGGAGAAAA--GATGACAAATGTATCCTGTATATACTGCTGTACATACAAACTGTATTTTTTTTTGTCTTTTATGCCTTGCTATTTTCT-----------------ATTTGCATGGAACATCACCTTCATTGAAATGTTAACAGTGTACA-GATGGAATACACAGCAAAATGGTGCATCACAAATGTGTTACATGAAGAACCTTCACAACTTCATGCACTCAGAAACATTCATGAAGAGAACG---GGATGGCCAAGATGGTACTAAACCAGGTGCGTTGGGTACAGATAATACAAGAGCGGCACCGCTGATATTTTTAGCTAGGAGGAAGGAGAAAAAGAAAGA .:..x...........................::.................----.......................:....--..:.........................:.....:....--------....:.......x.......................................:...:..........:.................x................x....:....:.------...........:.....x...x...x..xx:..........xx........x......:.......--------------------------------------------------....::.xx...........x:...:..x.............--:.............:..............:.........:.:.....:....x..::................--.:....x....::................:......x..:.........................:..:...--------.....--------..........-.........:.....::..x.x.x...xx......------:...x::.....:.-----------------------...x.--.....x.....--:...:..-..x::.::.:....--..x..:-..x.....x:........:..x...:..x...::..x..--.:.xxx:x.x::.:x..xxx...:......x.....-----------.:.:.x...:---..:x::.x.x.....x.x.....x...:.------..x:...:x.:....x.:.:.x::.x.xx:..-.x.x.x::x:..:.....x....x..:x.xx.........x.::x....--...x...x.-.....:::---------------:..:.....:.:.:------...:x:x..:------.....x.:.....:...x......::.x:::----------------------------:......xxx...-----..:.x....x.::x.x.--------------.:..::x....-----x.xx.::.:...xx..::....:.xxx:x.:::.xx.x...x:.xx..:..-------..::x...xx:.:..x.x:x:xxxx....x.:x:...:.x..x-----.x.....:..:.:x:..xx.x::x:..:x....--::x...x.......:..:..x.:....x--.......:---:...:.:...x..x:x...x:.:..:..::....-....:.x:xxx.x...x.x:...:.:..--------------------.x..:.:.x..x:.x:...-:...x.....--.x...:.x....:x.:xx..x..----.:.x.:.x::.x::...x.---------------------------------------------------.:............x.x..::.x--...x....-------------------------------...:..:..x...--------..x:.:.x....:..:.xx.xx.:.xx.....:....:..:..:.:x:x....x.::-:x............x......x:.:.:--...x:.:x.x.:...:.xx.....xx..:....xxx...x.::....:x.x..:..x..........:...:-------....x..xxx.x.:.:x..xx:.:.-.:..:.:..x:..::::...x:.-.x...:.:.-.:...:..x.x.x..--...::x....x.x.:.:----------------..:::....::.::...-------.......--x....x.:x.:..:..-----.....x..:-...:.x..x.xx:.x.:x..:.x.:.-.x:......:..:.----.x........x........x..::......x--.....x:.:.-.:.x..xx:x...:..--------------..x..........x.x.:.x..x:.::x.....x.:.-----------------:....::.........x..x.x:.....:...x....:....:.-..x......:.::::..:...:.........x...::.......x..:..............................x.........:.x.---...:....x..--...xx:x.x........x...:.x.....x...:..::..:.....:.:...x.--.......:::....:::..::::..:.... 51M4D28M2I39M8D114M6I66M50I42M2I73M2D72M8I5M8I10M1D35M6D14M23D5M2I11M2D7M1I14M2D6M1D39M2I36M11D10M3D29M6I32M1D49M2I9M1D8M15I14M6D10M6I31M28I13M5I17M14I11M5I51M7D43M5I33M2D28M2I8M3I34M1D28M20I19M1D10M2D23M4I19M51D23M2I8M31D13M8D57M1D27M2D72M7I25M1D23M1I9M1D15M2D17M16D17M7D7M2I16M5D9M1D26M1I14M4I31M2D10M1I16M14I37M17D44M1D92M3D11M2I54M2I30M 1359/1899 71.6% 2131/94230402 0.0% 465/1899 24.5% 77482123 NA +3123 chr4 + 190214555 113454079 113454078 113454139 61 TTTACCTTAAAAAAAAAAAAAAAAACCAAACAAACCAAAACAGATTAACAGCAAAGAGTTC chr4 - 94230402 35903577 35903576 35903637 58326766 58326765 58326826 61 TTTGTCCTCAGAAGAAAAAAAAAAAGAAAACAAACCAAAACAACCTAACAACAGGGGAATC ...::.:.x.:..:...........xx...............:x:.....:..::.::x.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 77550502 NA +17415 chr4 + 190214555 113457331 113457330 113457607 277 TTACTTGATGGGTACTGTTGGTGACCCCGAGCGATGAAAATGAACATTCTGCCACTTTCCATCCCGGCGGTGCCACACACGAGTCTCTTCTGACTGCATTGTCTTTGGCATTCCACTGCCATCCATGTACTGTGTGAGCCTAATATATGCTATGCAGGCGGCATCATCCCCTACCAGATGTACATGAGGGTTTAGAATAATAGTGTGGATTGGTTTATTGCTTTTGGACAAAGCTGAAAGAGAAAAACATG-----AAAAGCAAAATTTAGTT---TCTATGTAA chr4 - 94230402 35976520 35976519 35976804 58253599 58253598 58253883 285 TTACTTGATAGGTACTGTTGGTGACCCTGAACGGTGAAAGTGAACATTCTGCCACTTCCCGTCACGACGGTGCCAGACCCGCGTTTCCTCTGACTGCATTGTCTTTGGCATCCCAGTTCCATCCATGTACTGCGTGAGCCGTATATATGCAATGCAAGCAGCATCATCACCCACAAGGTGGACGTGAGGATTGAGGATAATGGTGTGGATTGGCTTATTACTTTTGGATAAAGCTAGGAAATAAAAACACACACACACAGGACAGATTAAGTTTTCTCTGTGTAA .........:.................:..:..:.....:.................:..:..x..:........x..x..x..:..:.......................:...x.x..............:.......xx........x.....:..:........x..:..x..:..x..:.....:..x..:.....:...........:.....:........:......:::.:.x.......::-----.x.:.xx.:...x....---...:..... 251M5I17M3I9M 227/277 81.9% 285/94230402 0.0% 8/277 2.9% 77480811 NA +8513 chr4 + 190214555 113460096 113460095 113460259 164 AATTCAGAGAGGTTTAAAAAGGGCATGTTATTAAATTAGGAATAAATGTACCATTTTCAAAGTAGAATCGGTGAAAATCCATCCCTTCCACTAAATTACCCAAAGCTTCAGGTTCAAAAGCAGTAAGGCCTGGGTCACAGATTTTTCTGTAAAAGAAAAATAAT chr4 - 94230402 35977871 35977870 35978015 58252388 58252387 58252532 145 AATGCACACAGGGATGAAAAAGGAATGTT-------------------TACCATTTTCAAAGTAAAACCGATGGAAGTCCATCCCTTCTACTAGATTACCCAAAGCTTCAGGTTCAAAGGATGTAAGGCCTGGATCACAGATTTTCCTGTGGAAAAGAGGAAAT ...x..x.x...xx.:....:..x.....-------------------................:..:..:..:..:...........:....:........................:.xx...........:...........:....::..:.:.::x... 29M19D116M 118/145 81.4% 145/94230402 0.0% 19/145 13.1% 77482225 NA +6589 chr4 + 190214555 113465522 113465521 113465619 98 TACTCACGTGTAGGCTTCAAAGTCCCCATTGTTGATAGCTTCGATCAGTTGTTCAGTGACTTTGATAATCTCTTGCTTTCGTGCT----AAAGGCAAAAATA chr4 - 94230402 35979147 35979146 35979248 58251155 58251154 58251256 102 TACTTACGTGTAAGCTTCAAAGTCCCCATTGTTGATAGCTTCAATCAACTGCTCAGTAACCTTGATAATCTCCTGCTTACGAGCTGGAAAGAGATACAAATA ....:.......:.............................:....::..:.....:..:...........:.....x..x...----.:..::.x..... 85M4I13M 83/98 84.7% 102/94230402 0.0% 4/98 4.1% 77486375 NA +3523 chr4 + 190214555 113496524 113496523 113496606 83 CTGCAATCTCCACCCACCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTTGCTGGGATTACAGGCGCGTACCACAGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..::.:xx.x.:x.:...........x...x..x.x........::.:...x.....:.:....--..:.:.....x... 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 95299398 NA +6236 chr4 + 190214555 113500237 113500236 113500652 416 TCTACAGTTCAAAATAT---ATAAAAGAATATGTAGGAAA----------AATGACAAAAGTAACATATTGTTGAAATAATTATGTACTTATAAAAATATTTTTTACTCATAAATAAAATATTTTTGTGCTTTAGGATAGGCCTACTTCCTAAACTTATTAGTTATTTGAAGCACTTTTTTTTTCATATATATATGTGAAGCTC--TGAGGTAG-----------GATTTTCCA-----TTTCTGGTTAA-ATCATACCTTTCACATCTTCATCCTCAATTGTTGTATTTGAACTCTCAGTTGACTCCTGATGAGAAGAAAACACATTTTTAGGTTGCACGCAATGAATAGCTT--GATTTCCT--------CCTTAAAAATT--GGCTAGTGACATACATATCATGCAAAATTCTTCAGCAGGCT---ATGTGCATATGCTGACATGCAAATGGACAAACAC chr4 - 94230402 35998113 35998112 35998533 58231870 58231869 58232290 421 TCTTCATTTCAAAATGTCCAGTAAAATGACATCTGGGGAACTGAAAACCCAATGATAAGTCTGAAACGTGTCAGAAGTAATGAAGAG--TGTAAAGATAATTTCATTTAAAAAACAAAA-----------------ATAG---TATTTTCT---CTTATCACTCATTAGGAG---TTTTGTGTTTAACAACCTA-GTGAAGTACATTCACATAACCCATGTTACTGCTTCTCCAGACATTTTAAGCTTAAGATCATACCTTTCACATCTTCATCTTCAATGGTTGTATTGGAACTCTCTGTGGACTCCTGTTGAGAAGTAAATA------TAAGCAGAATGTATAAAAGAAGCTAAGACTTTTTTTGTGAGCCTTTGAAAATTACAGTTAGTTACAG--ATATCATGCAAAGCCTGGAAGCAGAATGGGATGTA-----GTTCACAGACAAATGGTCACACAC ...x..x........:.---:.....x:.:..x.:..:..----------.....:..:xx.:.x.::.xx:x...:....x.x.x:--.:....:...x...:xx:.x.x...:....-----------------....---..:..:..---.....:.x.:...x.:..---....x.x..:.xxx.:x..-......:x.--.x.x:..:-----------.x..:....-----...xx.x....-.......................:.....x........x........x..x........x.......x...:.------..:.:x.x.:.:.xx:..x.:x:.--..:..::.--------.:..:......--:.:....x...x--............::::xxx.....:x.---....:-----.:.x...x:.......x..x.... 17M3I20M10I37M2D30M17D4M3D8M3D18M3D19M1D9M2I8M11I9M5I11M1I73M6D24M2I8M8I11M2I12M2D27M3I5M5D24M 265/374 70.9% 421/94230402 0.0% 89/374 23.8% 77502124 NA +3262 chr4 + 190214555 113502011 113502010 113502195 185 TTTTCTGAGTCTTAAGATAAAATGTGCTT-TCTAAGTCTTAAACATCATTGATA-------AGAGTATGGAGAAGATGCATGACTATATCT-----AATATTTGAGAAAAGTTTAGTATTTTTTCTTCCCTTAGAGATATAATAATATATGAAAAGTAAGAAATTGGACACATGGAATACATTCAGAAAAGGTCTTTC chr4 - 94230402 85533115 85533114 85533301 8697102 8697101 8697288 187 TTTTTCAAGCCACAATCTGTAATATACTTATCTTACGCCTAACGTTCACTGATGCAACATGGGAAAACACAGAAGATACTGTACCACACTATTAGAAATGTCAAAAACAATGCCAGAATT---------CTTGTAAATAAAATGAATTATGGATAGTAAAAAATTGGATACATTGAGTACGTTCAGGAA--GTTTTTC ....:::..:.x:..xx.:x...:.:...-...x.xx.:...xxx...:....:-------:..:x.::x.......:.xxx..:.:.::x-----...:.:x:.:.x..xx::..x...---------...:x.:...x...:.xx....:.x.....:........:....x..:...:.....:..--..:.... 29M1I24M7I30M5I24M9D60M2D7M 111/174 63.8% 187/94230402 0.0% 24/174 13.8% 27968896 NA +16097 chr4 + 190214555 113502875 113502874 113503297 423 GAATATTTGATGAGATGTATAGTCTTGTTAAAGCAAGATGATGTTGATTCTTTCTGAATACCTTGTTTCCATCAGGGTTGTGGATTACAGTAGTTTGGGGCTCCTGAGTGAGAACAAAATAGAGAAAGAAACAGTTCGCATTGGTAAGTACATTCTTTCTAGTGTGAAGGACAGAGCAGAGTGAGCCAGCTGACAAAATG--AAATAGTGACAAGAGCTAAAGCGA-TGTTAACTGCTGTCAGAGT-TGCAGCTGACAATATCTCTGATGAAAGATCTCCCTGGCG--AGGCCATGAGATAGGAACCTCCCTACCCA--GAAGCAGCATGCAAAAGACCTTATTCTTGATCAGCATTCAAACAAGGCTTTGATATTTA-GAGATCTGAAGAGGCACTCACTGTTTCACTTAATCCTATGCTTTCCTTTCTTC chr4 - 94230402 36000900 36000899 36001319 58229084 58229083 58229503 420 GAACAGTGAATGAATTGTG--GGATTGGAAAGGCAAGATGGAGCTGATTCTTTCTGAATACCTTATTTCCATCAGGGTTGTGGATAACTGTAGTTTGGGGCTCCTGAGCAAGAACAAAATAAAGAGAAAAAGAGTTCTCATTGGTAAACACATTCTCATTAGTGTGAGGGAT---GCAAGAAGAGCCATCTCA-GAAATGCCGAACAGTGACAAGAGCTAAAACAACCGTTAACTGTTGCCAGAGGATGAAACCG--GATGCCTCTAAT-ACAGACTTCCTCAGCAGCAAGCCAGCAAAAAAAGACCATCTCACCTAATGCAGCAGCATGC-AGAGACCTTATTCATGACCA--ATGCAAGCAGGGCTTTGAAGCTCCTGAGACCTGCAGAGGCTTTACATTTTTTTCTCTCTCTTTTTTTTTTTTTCCCCC ...:.x.x:....:x...:--.xx...xx..:........:x.:....................:....................x..x...................::...........:...:.:...x.....x.........::.......:x:........:...:---...:::x......x..x.-:.....--:..:................:.:.-:........:..:.....x-..x.:.:.--:..::....:..-.x...::...:::..:--.:....xx.:.x.:::...x:.::...:.--.x..........-.:...........x...:..--..x...:..:........x::.:x-....:...x......x:.xxx.x...:x..:xx..:.x.x:...::..:.::. 19M2D151M3D18M1D6M2I24M1I19M1I8M2D12M1D16M2I29M2I12M1D20M2D24M1I53M 303/411 73.7% 420/94230402 0.0% 21/411 5.1% 77501975 NA +18478 chr4 + 190214555 113504405 113504404 113505164 760 TGAAAATTTAATTTAAAACATAATAAACAGAAAGCTCTAAATTATCCAGTGCCTCTTTATCTCAGAAAGTGAAGTCTTACAAAGCCCTGTTGTGTTTTAATAAGAGGGAAACGAGAACTCTGAATAAGGTCTACTTTCATGTTGTCTAGCAACAATCCCATTAGCTCTCCTTGATGTAAGCATTTGCATCATG--AAAAGAAGAAAC----CATTGTTT--------------------GCAT-------AATCTAGAACTATCATCATCAGAAGAGCTAAGAGCAAC----CAAAGCGCTGTA-----TTTTGAATGCAGCATGCAGTAATTCCAACTACAGAGACCACAGCTATCAGTACAATGTTCAACAACGAAATGAGATAATCTCATGTTAGAACACACTGCTTGACAACTAACTTAACCAAAAAAAACCAAAAGAAATGAACTTGGTCATATCATAGAAAGCAAAAAAAAAAAAAAACAAAACCCAACACCCAACGAAATAAAATATTTATATATATGTATCTATATAGTGAAAGCAAATGAGA-GAAACCACAAAAAAAA-------AAAAATGTAAAGA--ACTTAAGAAGGGTTACAAAGAGTCCAGGTATACCAGCGCTGGGGTAGGAATATTTTCTTTGGGGCTGGTTACCACGTTGGCTTTGTTGTTTATCTGTGGGTATGCAGAAAATAGAAACAGAGATGCCTTAAACCCCTTGGTAGCCA--------ATGTCTCT---------------------AGATGCAGCATGTCTACATAGAGATGTAGACATGAAGATAAAGAGCCACTGAAG---------ATGAACGTGAAAGA chr4 - 94230402 36002032 36002031 36002831 58227572 58227571 58228371 800 TGCAGATTTAAATGCAAGAGAAATAAGCTAAAAAGTTTAGGAC-TGCAG-GCCTCTAGATTCCAGG----GAAGACTTGCAAAGTCCTGCTGAGTCTCAGGAAATATGGAATGAAAATT-TGAATAAGGTCTAGTTTATGGTTGCCTAGCAATAATCCTGTTA-CTGTCCTTGACATCAGTACTTACACTAAGGCAAAAGCAGAGAAAATACATTTTTTTTTTTTTTGGCAGAAGGTTAGCATTAAAAAGAATC--AAACAATCATCAGGCAAAATGCTAAGAGCAACGTAAAAGAGCATTCTACTCACTTTCTGGCAGAGCATGCAAAAAATTCAACTACAGTTACAAATGCTACAATTGCA---TCCAGCTTCCACATAATGTTTTCTATTAATA-AACACGCTGC--AACAATGGACTTCCTCACACACA--CAAAAAAAATCACCATAATT-------------CAAACAAAAGGATTTTTCAAAACCTGTTCTTA--GAAAGCAAGCA---GGGTAAATGCAT-------GAGAAAGCAAAAAAGAAGGAAGAACAAACAGAAGACAGTCAAAAACTTCAAGATAGCATGAGAAGG------AAGATTCCAGGTATACCAGCGCAGGGGTAGGAATATTTTCCTTGGGGCTGGTTACCACGTTCGTTTTGTTGTTTATCTGTAGGTATGCAGAAAATAGAAACAGACAGGCCTTAGAACTCTTGGTAGACACCGtatctatatctctctgtatagaacatctatatacagatatag-atatctatatatagatatagatatGGAAATAAAGAATCACAGAAAGATGAACTTATGAACTTGAAAGA ..x.:......x.xx..:x:x.....:.x:...:x.:..::x:-.x...-......xx..::...:----....x...:.....:....:..x..:.:.:x..:x:x.:..:..:..:.-.............x...xxx....:.......:.....::...-..x.......::.x..:.:..:..::.x.--.....x...:.x----....x...--------------------....-------....--:...x.......xxx:..:x............----x.:...::.x..-----...:x::::x........:x..x.:.........xx..x.xx....:x.x.:..---.:..:.xx.x.x..:.x:.xx...xx.:x..-.....:....--:....:x:....xx:..x.x.x.--.....:....x.x.x.::.:-------------....x....::.xxxx:x...x..x::x.::.--....xx..::.---:x:..x...:..-------.x.........x:...-.:..xx.....x.:..-------.....:x.x....--:.x.:......------....x.................x.................:....................x.:................:.......................x.x......:.x.:........x..--------..:.....---------------------....::..-..:....:...x....:....:...:.:.......::...x...:---------......x....... 43M1D5M1D16M4D49M1D43M1D29M2I12M4I8M20I4M7I4M2D32M4I12M5I54M3D31M1D10M2D23M2D20M13D32M2D11M3D12M7D16M1I16M7I13M2I11M6D129M8I8M21I8M1D45M9I14M 514/710 72.4% 800/94230402 0.0% 140/710 19.7% 77502373 NA +13362 chr4 + 190214555 113508136 113508135 113508653 518 TACACCCTCTCCACTTACTTACACTATCTTAGGTAAATAAGAC-------TTTTATTCCTAAGTGTGAAT-TTTCACAGGAGGAGAAATCTGGCAGATA--GATCCTCACCATCATCTGAACACTCGAACTGGACTTCCTTTTCTGAATTGACCAGTCAAAGAGAAAGGAAAAGAAAAAAAAATATGACCGGTTGAATTTAGAGTATCAAAGCATGGAGTATAGAATA----------------ATTTTGTTTTTAAAGAGGAGCTATAAGTTGAATGGAAGGAAAAAGTTCTGGAAATGCGTTCTATGTAAGGATAGTAATGAAAATA-AATATCTCAATA-----------GGAACTGTGAGCTCTCCA-------------TCACTGAACGGTACAGGAAAGCCCAGGAGAAGAAAATGTTTGGAAAATGTAAGATACCACATTTCTACTATTGTAACATTGGGAAAAAGGCAGTCATCAACTAT---CATTCTTAAAATCTAAATGGA-ATAAACTAATCAGAATGAAGACACAATTGCAGGCTGAGGAAAGCAATTGGTAAATGGAAA chr4 - 94230402 36006751 36006750 36007292 58223111 58223110 58223652 542 TAAACTCTTGCAGCTT-CTTGCAGTATGTTAACAAAACTAAATGCAACTGTTTGATTGCTAGGTGTGAATGTTTCACCGGAGGAAAAATCTGTCAGATAAAGATCCTCACCATCATCTGAACACTCGAACTGGACTTCCTTTTCTGAATTGACCAGTCAGAGAGAAAGGAAAAG--AAGAAAATGTGACTGGTTGGATTTAAAGTATCAATGCATGGCGTACAGTATAtttcttttttctttcttttttttttttAATAGGAAAAGACAGCTTAAGCTGTAGGAAGGAG---TAGAAAAGCGC---------------TAGGGAGAATACAGTACCTCAATAAAATAAATGACAAAAATAAGAGTTCCCCAGATGTAAATTTACTCCCTTTGCTCTACATGACCATGCAGGCAAACAGTAGGTACAAAATGTGCTGAAAACCAAATTATCA--AGTGTAAT-TTAGGCAAAATTTTGGCAACAATTGTTTGCAGTATTATAATAAAAATTGAGATAGAATAATACCATTGTAGAC----CTGTAG---GAGGAATGATATTTAAAAAAAGAAA ..x..:..:x.x:...-...:..x...x...:xx...:x.:.:-------...x...x...:........-......x......:.......x......--..........................................................:..............--..:.....:....:.....:.....:........x......x...:..x...----------------x....x.......x::.:.:xx.:.:x..:.::x.x.....::..---.:....x...:---------------..:x..:....-.:..:.......-----------::..x.:x...:..:...-------------..x..xx:.xx....x..xx::x....x:..x.:x.x..x:::..x:..:x::.x....x...x::.--.x.....:-..:..x....xx:x.x..x...:.:.---..x.x...x...xx....x..-...:.x....xxx.x..x....----:..:..---......x.xx...x:x...x:.... 16M1D26M7I20M1I28M2I73M2D52M16I45M3D11M15D11M1I12M11I18M13I67M2D8M1D26M3I21M1I22M4D6M3D25M 353/487 72.5% 542/94230402 0.0% 86/487 17.7% 77501385 NA +4895 chr4 + 190214555 113509628 113509627 113509699 72 TTTAACTTACCTTTACTCCATCTGGTTTCTTCAACAAACTCTTGGCTGCTGTAAAATGAG---AGTAAAATCAGT chr4 - 94230402 36008368 36008367 36008442 58221961 58221960 58222035 75 TTTAACCTACCTTAACTCCATCTGGCTTTTTCAGTAAACTCTTGGCTGCTGTAAAACGAGACAAGTAATTTCAGT ......:......x...........:..:....::.....................:...---.....xx..... 60M3I12M 63/72 87.5% 75/94230402 0.0% 3/72 4.2% 77501260 NA +11154 chr4 + 190214555 113510853 113510852 113511238 386 AATCTTTAGCAACACAGCTATTAATTTATTATTAATTGAGATTGTAAGAAATAGTTGCCTTAGCCATTATATTGTTTGCCTGGAGCTAAAAAGCAGTATTAAATCAATCCTGTGGCAGT--TAATAGGTTAGAAAGCAAACTCAGAATAATTGAAATTGCAATAGCAAGCAAAGAGAAGATGATGATTCAGGGTAAGCAGGGATTTGGCCTGGGAGATGCAAAAATGTCCCTTTTGGTTACTATTCACCTTACCTCACAAGAAATA--CATTCCACATAAAGGGAGAAAAGAAAAAATAAAA-ACAACAACTTTATAACCATATACTTATGGATAAATTACTTTAAAGAGCATGTTTGGCAATGAAATAGGATGAATAAAATACTCTAAAA chr4 - 94230402 36010520 36010519 36010885 58219518 58219517 58219883 366 AATTTGCAGTAGCGAAGCAATTAGCATGTTCTAAATTAAGCCCACAATGAAAGATTTCTT--GCAACTACA-----------------AGAATTAGCTATAAATAAAACCTACGGCAGTGCTAATAAGCCAGAAAGCAGACTAAAGAGAAATGGCACTGTGACAACATG--AAGAAATTAAAGTGATTTACAGCAAACAGCAATTT----TGAAGAGAAAAAAGATGTTCCTTTCACGTGCTGAGGGTCTTACCTCACAAGGAATATACATTCCACATAAAAGGAAGAAAGAAAAAGGAAAATAAAACACTTTTACAACCACATTGTTATGGACAAATGACCTTCAAAAGCATGCTTTGCGATGAATTACAATGAATAAACAACTTGAAAA ...:.x:..:.:.:x...x....::x.:..x.x....:..x::::..x:..x::..x.:.--..x.:..:.-----------------.:..x:..:xx.....x..x...::......--.....:.::........:...x.::.x..x..:x.:..::.:.:..x.--....:.xx.x::.....:.x:.:..:...x:....----..:::::x:x...:....:.....::xx.:..:xxx::.............:....--.............:...::.........:x....-.x....x:....:.....:..xx.......:....x..:..x..:......:..x..:.....x..x:.........xx...:x.... 60M2D9M17D31M2I48M2D35M4D56M2I34M1I88M 242/361 67.0% 366/94230402 0.0% 30/361 8.3% 77500333 NA +4349 chr4 + 190214555 113513213 113513212 113513379 167 CCTGAACAATGAAGTTTTTCTAAT--TATTAGATTTTTAAAATTCCAGAGACAAAAAAACAGAGACTACTTAAAAAGAAGACCAAGGGATAAGAAGCAGAGTTCCCAATGCATGTACCTGAGAAATTCCTTGTAGCCAGCATAGTTGTCAAGATGGCACCCTGTGAAAA chr4 - 94230402 36012109 36012108 36012269 58218134 58218133 58218294 161 CTTGAAAAACAAAGATCTTTACATGCCAATAAATCCTAATTATATCTTAGACATCATCACAGACATCAA--AACATAAAGACCATATGA------GCCTGGAGCTCAGTTAACATACCTGAGAAATTTCTGGTAGCCAGCATAGTTGTCAAAATGGCCCCCTGTGTAGA .:....x..::...x.:..:xx..--:.x..:..::.x.xx..x:.xx.....xx.xx.....x.::.x--..x.x:.......x:x..------..xx:.xx.:..:.xx.::.............:..x....................:.....x.......x.:. 24M2I43M2D18M6D74M 107/159 67.3% 161/94230402 0.0% 10/159 6.3% 77501104 NA +8580 chr4 + 190214555 113513823 113513822 113513945 123 TTCTTACCTTTAGTTTTCTTCTAGCATTAAATTTCTTCAAGCAGTCTACAGTCTCCTGTCTGTGCATCATGGAAGCAACAGTAGAACGTTGCTAGAAGAA-GAGGAGAAAAAGTAACTTAATTG chr4 - 94230402 36013100 36013099 36013223 58217180 58217179 58217303 124 TTTTTACCTTTAGTTTTCTTCTTGCATTGAATTTCTTCAAGCAATCTACCGTCTCCTGTCTGTGCATCATAGAGGCAACAGTGGAACGTTGCTAGAGAAATTAAGAAAAGAATTAATTTAAATG ..:...................x.....:..............:.....x....................:..:........:.............::..-x.:..:..:..x...:....x.. 100M1I23M 106/123 86.2% 124/94230402 0.0% 1/123 0.8% 77500723 NA +11858 chr4 + 190214555 113515005 113515004 113515211 207 AATATATTAAAGGAGAGCTTATTTTTCATTTTAGTTCTTGAAGTTTTGGAGAAGTTTTACTTACACAGATCCATGGGTGCTTCAGTGCCTCTGAGGCTGTGATGCGTTTGGCAGGGTTGATAGTAAGCATTTTATTGATGAGGTCTTTGGCTTCAGGAGTCACCGTGTCCCATTCTGGTGATGGAAACTTCAAAAATATAAATTTAT chr4 - 94230402 36014173 36014172 36014376 58216027 58216026 58216230 204 AGTATACCATAAGGTGATTTGTCTTTCAAATTATTTTGTTAAATATGTGAAAG---TTACTTACACAGATCCATGGATGCTTTAGTGCTTCTGAAGCTGTGATACGTTTTGCAGGGTTGATGGTAAGCATTTTATTGATAAGGTCTTTTGCTTCAGGGGTCACTGTATCCCATTCTGGTGAGGGAAACTTAAGAAAAATATGTATAT .:....::.x.:.:x:::..:.:.....xx...x..:x.x..:.x.xx..:.:---....................:.....:.....:.....:........:.....x...........:.................:........x........:.....:..:..............x........x.:...x...x:.x... 53M3D151M 161/204 78.9% 204/94230402 0.0% 3/204 1.5% 77500832 NA +7874 chr4 + 190214555 113517556 113517555 113517694 139 TACATACATCATAAGCTCCAGCCTTGATCTGCTGATAGAGTCTGTGTTGGTCTTCATCCCAGAAGGGTGGATACCCCACAAGTAGAATATAGAGAATGACACCTGGAGGAGAATATAATGTTAACACAATTTAAGTCAT chr4 - 94230402 36015185 36015184 36015316 58215087 58215086 58215218 132 TACGTACATCATAAGCACCAGCCTTTATCTGCTGGTAAAGTCTGTGCTGGTCTTCATCCCAGAAAGGAGGATAACCCACCAGGAGGATATACAGAATGACACCTGCA-GAAATCATAGTAGTAA------TTAAGTAAT ...:............x........x........:..:........:.................:..x.....x.....x..x..:.....x.............x.-..:.x:...:.:x...------......x.. 107M1D16M6D9M 111/132 84.1% 132/94230402 0.0% 7/132 5.3% 77502371 NA +7504 chr4 + 190214555 113531204 113531203 113531301 98 ATAATTGCTTACCACATGCCCACATATCCACTGGCTTTCCATAAGGATCTTTACGTAAAACTTCTGGAGAAAGATATCCAGGTGTGCCAGCAAAACCT chr4 - 94230402 36016102 36016101 36016199 58214204 58214203 58214301 98 ATAATTCCTTACCGCATGCCCACATATCCACAGGTTTTCCATATGGATCTTTCCGTAAAACTTCTGGAGAAAGGTATCCTGGAGTGCCAGCAAAGCCT ......x......:.................x..:........x........x....................:.....x..x...........:... 98M 88/98 89.8% 98/94230402 0.0% 0/98 0.0% 77515102 NA +10437 chr4 + 190214555 113537334 113537333 113537475 142 TACTCACCAAACCACGCCTGCTGGTCCCCTTGAACTTCTATGGCTAAGCCAAAGTCTGCCAATTTCACAGCTGCTCCCTTGGATTTGCTAGCTAAAAGCAAATTCTCAGGCTTTATTTAGAAAGAAAAAAAAA----GAGACTGAA chr4 - 94230402 36022564 36022563 36022709 58207694 58207693 58207839 146 TACTTACCAAACCAAGCCTGTTGTTCCCCTTGGACTTCTATAGCCAATCCAAAGTCTGCCAGTTTTACTGCTGCTCCCTTGGATTTGCTAGCTAAAAGTAAGTTCTCAGGCTTTATTTGGAAAGAGAAAAAAAAATTGAGATTAAA ....:.........x.....:..x........:........:..:..x.............:...:..x.............................:..:................:......:.......----....:.:.. 133M4I9M 125/142 88.0% 146/94230402 0.0% 4/142 2.8% 77514770 NA +33712 chr4 + 190214555 113547633 113547632 113548910 1278 GCATTACTCACCTTCAGGTCCCGATGGACCACGCCCATCTGATGGCAGTGTAGCACAGCCTCCAGGATCTGCTGAATGCAATGACTGCATGCAAACACCAGGGGGCGTGTGTTAGTTCCAAGCTTACACTCACTGTCTGTATACCCTCAG---AGAGACTGGGTTAAAGTGCAGAGCTAGCAGACAACTGGGGTTGTATTG-------------TACCACCTTCAGTCATGTAAACATATTGCTCAAGTAGA----GTGACTACTACC----------------TCAGAACAA-------TCAGATCTTACCA----GATGTGAG--------CCAGAATGTGGGTCCATTTGTTCTAGAAAAATCCATTTTGAAAACACTTTATGTCATTCAAGAGATCATTTCCTGGTTATAAATT---CTTCCAGGAAATAAAGTGGAACACAAATATAATCTTTATAGCTGTGGTGTTCCGCCTCCACCCCGTCACATAAATTGTTTCCCTTTTCTCTCCCATTTTTCCAGTATTGTTCTAAAAGCTGTCACATTA---ACAGTCAGGGCA-CCACTAAGGTTAAA---TTAAGATACCTAATGAATTTTTGATAAATCATTAACTTCTTGTGCTTTAATTTAGCTGGCAATTAATATCTCTTGCCTAAGGGTTCATCAGACTCAAATGGAGCAATGCGTAACCAGTTGTTCTGCTACAGCAACCCATGGTCTCAGAACAGAAGTGGTGTTTAAAATCTACAGGCGGACATACATCACAGGCCAAGTTTATCTCCAGGCAAATGCTGGGCAATTCAAGAAAGCCTGCTCCTCAATCCCTTTTGGTAGGTAGTTTACTGCTTGG---AAACTTAGCAGGTTGT-----------ATTCTTTAGTATTC--TTCCCTTTTTGCTATGATGTATATTTAGCCTGTAGATGAGCAAACTGGAA-GAGGCATCATGCATTATCATTTCATCATTTACTCATTTTAGAAACAAGTTGGGAAAGGCAAGGGAACCATTTTAAATACCCACCCTCTGCCCTTTCCCCAGAAAAAAAAATAAAACTGCTTTGATTCAGATTTATGGACTCCATATACTGACCTTCAGGTCCCTGTGAACTATGCCATTTAGGTGACAATGATTAACACTTTCTAGAATCTGCTGTATACAATGACTGCAAAGATACAAGGGCAGAATGGAAGGGAGAACATTTTAAAGGCACATAATCACATTGAATATGAAATAAAATGAAAGTCCCAATGAAACAAACA-AACAAACAAAAA-----TTATATTTCTTCACTTTTTTTAGCTTTACGT-----TGGAATCAAATAAAGCT--GAATAAAGCTAATTTTGGTTCTAA chr4 - 94230402 36026533 36026532 36027824 58202579 58202578 58203870 1292 GCAGCACTCACCTTGAGGTCGCGATGGACTACGCCCATCTGATGGCAGTGGAGCACAGCCTCCAGGATCTGCTGAATGCAATGACTGCATGCAAACACCAGGGG-CGCGTGTTAGTTCCAAGCGTGCAccggccgcccgcacgcccgcagccaggcgtcggggcggcggcgaggggcaggcagcgg---ggggccgtgcgggccgggccgggggcgccgctctcccccac-----cgttccgctccgctcggctccgcgcgtaccgccccgcgccgcccGCCGCTCAGAGCACGACGGCCTCAGGCTCCGCCGCGGCGGCACAGGGCCGACCTCCGAGACGTGCCTCCCTTGGCTC------GCTCTGCTTAAATTGGACTGT-TTTAGTTTAGG------TTTCTTGTTCAAAAGCTGAGTTTTCACAAAAGCGCGTGGA-------------TTTGGCCAATTTGGTGAG-------------ATCAAAGAAAAGATTTGAGCTCTTCTGTACATTTTCCTGTTCATTTACTAACACCCCCCCCACCACACATACTAATAGCAGCCGCTGAGGTAGAAAACGTTCGAGGCCAGGTG--TTTTAGGTAAATCATTAACTTCTCTCTGTCCAATTTTGCCAGCAATTAGCATCACTTGCCTGAGGGTTTGTCATACTCTAAAGCAGCAGTGTGCGACCGGCTGTTCTGCCACTGCAACCC-CGGGCTCAGCACAGA-GTGGTGTGTCAA-TCTGCAAGCTGACATACATCACAGCCAACGTTCACCTCCATGGGCGTGCACAGCGATACACGGACA-----GCCTCAATAAAGTACCAGACACGTTTCACAGCATGGGACAAATCCAG--AGCCGTGGGAAGAGACAAGTTTTTGGCAACCATTCCCCCTTGTGCCATGATGTATATTAGGCCTGTAGACTTGCAAACTGGAAAGAGGCGTCATGCATTAT----TTGTTGTTCTGGCTGTTTGGAGTGAG--TAGGATAGGCAAGGGAACATCGCAGCCAACCCACCCCCTGCCCGGC------AGAAAGAAACAAAACT---CTTATCCAT-TTGATGGGCACCAGATACTGACCTTCAGGTCTCTGTGAACTATGCCATTTAGATGACAATGATTAACACTTTCTAGAATCTGCTGTATACAATGACTGCAAAGATACAAGGGCAGAATGGAAGGGAGAACATTTTAAAGGCACATAATCACATTAAATACAAAATAAAACTAAACT-----TAAAAAAATTATAAAGAACAAAAACAGTTTTACATCTCCTGACAGATCTTGGTTGTACATTGAACTGGAACAAAACAATGCTAAAAATTGAGATATTTCCAGCTCTAA ...x:.........x.....x........:....................x.....................................................-..:...............x.:...:x:.:.:.:.:.::...x...---:.x.x.x...:x:x:.:.x:.:..x:....xx:---....::..::x.-------------::..:.::..xx:..:-----.:.x::....x:x.x.:----.:.xx...::..----------------.....:..x-------....::::::..:----.::::::.--------..:::.:...xx...x..x.:..------:x..:::..x:.xx:x...x.-.x.x:..:.:.------....:..x.:.x..::.---:..:..x:...xx:x.....-------------:..x::x:x.x.....xx-------------:...x.x...xx:...xxx:.:.:::x:x......:.::x.xx.x.x....x.x.:x:.x..::.---.:.x.x.x:...-..:..:....x:..---x.xx..x:..x::..--....x.:................:x:xx.::.....x..::.......::...x.......:......::...x....x..x.x....:..:.::...:.:........:..x.......-:..x.....x.....-.......x.x..-...:..:..x..............x.x.x...:.:.....x.x:x:...xx:..:..x..x.:.x:-----x.......xxxx.x:x:x.x:::x..:..x..x...---...:::..--:.::..-----------.x.:...:.:.x:.--.:...:..x...:............x:.........:xx...........-.....:...........----.::.::..:xxx.xx...:..:xx.:--.:...x............xx:x:x:xxx........:......xx:------.:...:...:......---:.x..:..x-..x....:.x...x.................:....................:.....................................................................................................:....::........:x...x.-----.:...x..x:.-..x:........-----...:..:..:.x..xxx.:..:.:.x...:.-----.....:x...:..x...--:...x:..x..x..:::.:..... 104M1D45M3I33M3D12M13I16M5D17M4I12M16I9M7I13M4I8M8I23M6D21M1D11M6D17M3I20M13D18M13D65M3I12M1I14M3I15M2D120M1D15M1D12M1D66M5D36M3I8M2D6M11I14M2I50M1I17M4D26M2D46M6D16M3D9M1D176M5D11M1I12M5I31M5I17M2I24M 839/1197 70.1% 1292/94230402 0.0% 176/1197 14.7% 77521100 NA +4102 chr4 + 190214555 113547637 113547636 113547735 99 TACTCACCTTCAGGTCCCGATGGACCACGCCCATCTGATGGCAGTGTAGCACAGCCTCCAGGATCTGCTGAATGCAATGACTGCATGCAAACACCAGGG chr4 - 94230402 36027556 36027555 36027652 58202751 58202750 58202847 97 TACTGACCTTCAGGTCTCTGTGAACTATGCCATTTAGATGACAATGATTAACACTTTCTAGAATCTGCTGTATACAATGACTGCA--AAGATACAAGGG ....x...........:.x:..:..:.:...xx.:x....:..:..xxxx...x::..:..:........x..:...........--x.:.:..x.... 85M2D12M 69/97 71.1% 97/94230402 0.0% 2/97 2.1% 77520081 NA +3784 chr4 + 190214555 113548651 113548650 113548746 96 ACTGACCTTCAGGTCCCTGTGAACTATGCCATTTAGGTGACAATGATTAACACTTTCTAGAATCTGCTGTATACAATGACTGCA--AAGATACAAGGG chr4 - 94230402 36026538 36026537 36026635 58203768 58203767 58203865 98 ACTCACCTTGAGGTCGCGATGGACTACGCCCATCTGATGGCAGTGGAGCACAGCCTCCAGGATCTGCTGAATGCAATGACTGCATGCAAACACCAGGG ...x.....x.....x.x:..:....:...xx.:x.:..:..:..:xxx...x::..:..:........x..:...........--x.:.:..x.... 84M2I12M 67/96 69.8% 98/94230402 0.0% 2/96 2.1% 77522113 NA +6142 chr4 + 190214555 113552025 113552024 113552134 110 ACTTACCTGGCATCAGCTTCACTGTAGTATTCTCTTGCCACTATGTCTTCAAACAGTTCACCTCCAGTAACTCTG---------GGAAGATAAAAAACATAATCACTTTTAAAAAGAAG chr4 - 94230402 36030318 36030317 36030433 58199970 58199969 58200085 116 ACTTACCTGGCATCTGCTTCACTGTAATACTCTCTTGCAACTATATCTTCAAACAATTCACCTCCAGTGACTCTGTTAGAAAAAGTAAGATGGGAAAGGAGAT---TTCAAAAGAGAAG ..............x...........:..:........x.....:..........:............:......---------.x.....:::...x:x:..---..:x...:..... 75M9I19M3D13M 89/107 83.2% 116/94230402 0.0% 12/107 11.2% 77521707 NA +3079 chr4 + 190214555 113585380 113585379 113585450 71 TGTGCACGGACACAAACATACATACATACACACATATACATGTGTGTATATATGCACACACATATTTGTAT chr4 - 94230402 13455964 13455963 13456034 80774369 80774368 80774439 71 TATGTCCAGACAGTTGCATGCATACACATATACATACATACGTGTGCTTTTATGCACATACGTGTTGTTAT .:..:x.:....xxx:...:......:.:.:.....:.:.:.....:x.x........:..:.:..xx... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 100129416 90085139 +3021 chr4 + 190214555 113585396 113585395 113585439 44 CATACATACATACACACATATACATGTGTGTATATATGCACACA chr4 - 94230402 28570997 28570996 28571040 65659363 65659362 65659406 44 CAAACATACACACACAATTATACATGTATGTATATATGCAAACA ..x.......:.....xx.........:............x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 85014399 NA +3589 chr4 + 190214555 113600690 113600689 113600780 91 TGGCATAATCTTGTCTCACTGCAGCCTTGATGAACCGGGCTCAAGTGATCCTCTCACCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCA chr4 - 94230402 18197114 18197113 18197198 76033205 76033204 76033289 85 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ......x..x..------..:.....:x:.xxxx.:...:.......x.:.x.xx:x........:............:......x..... 12M6D73M 63/85 74.1% 85/94230402 0.0% 6/85 7.1% 95403576 NA +3370 chr4 + 190214555 113601677 113601676 113601766 90 TTTATTCTTTTTTTTTTTTTTTTTTTTTTTT-TTTCATTTTTTAAGTCAGGTTCTTGCTCTGTCACCTAGAGTGCAGTGGCGTGATCACAG chr4 - 94230402 62053652 62053651 62053741 32176662 32176661 32176751 90 TCTGTCCTTTTTTTTTTTTTTTTTTCCCTGCATTTTCTTATCAAAGCCATGTTC-TGTTCTGTCACATAGGGGGTGGCCTCGTGTTTACAG .:.:.:...................:::.x:-...:x..x.:x...:..x....-..:........x...:.x.::.:xx....x.:.... 31M1I22M1D36M 63/89 70.8% 90/94230402 0.0% 2/89 2.2% 51548025 NA +5700 chr4 + 190214555 113609133 113609132 113609230 98 ATACAGAGTATATACTTACAAATCAAACACCAAGTAGTGAAAGCCCTCTTCTGATATGCTATCATGAAGTCGCACTA------GAAAAAAATAAGAGAAGAAAA chr4 - 94230402 36038324 36038323 36038427 58191976 58191975 58192079 104 ATAAAAAAGACATACTTACAAGTCAAAGACTAAGTAATGGAATCCTTCTTCTGATATGCTGTCATGAAGCCGCACTATTGAAGGGAGAAAAAAAGATAAAAAAA ...x.:.:x.:..........:.....x..:.....:..:..x..:..............:........:.......------.:.:....x....x..:.... 77M6I21M 79/98 80.6% 104/94230402 0.0% 6/98 6.1% 77570809 NA +3449 chr4 + 190214555 113632299 113632298 113632377 79 CTGCAACCTCTGTCTCCTGGGTTTAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGTTGGAATCGCAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.......:...:.x...x.xx.x........::.......:.....:::..--.:........ 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 95435173 NA +3133 chr4 + 190214555 113650500 113650499 113650577 78 AGAGTGAAAC---TCCATCTCAAAAAAAAAAAAAAAGAAATTAGAGAAAAATATAATGGGTGGAAACAAATTA-AATTAACA chr4 - 94230402 44177675 44177674 44177756 50052647 50052646 50052728 82 AGAATGGAATATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGATGATCAACA ...:..:..:---....x..:...................xx...x......::..x:..x...:.x::..x.-:..:.... 10M3I60M1I8M 58/78 74.4% 82/94230402 0.0% 4/78 5.1% 69472825 NA +6703 chr4 + 190214555 113661667 113661666 113661795 129 AAAATTTTAAATTAACATTTAAAAAACATTAAAAATACGTTCTCACCAATATTAGGGTGCTTCAAAAGACGGCAGATTCTAGCTTCTCTTTCTAGTTTCTGATGATCTGTTAAAAAAAAAAACAGAATA chr4 - 94230402 36068193 36068192 36068316 58162087 58162086 58162210 124 AAAACTCTCATCTACTGTATAAAGCA-ATTAAA----TGTTCCTACCAATATTAGGATGCTTCAAGAGACGACAGATTCTAGCTTCTCTTTCCAGTTTCTGGTGATCTGCAACAAAGGAAAGCACAATA ....:.:.x.x:..x::.x....:x.-......----:....::............:........:.....:....................:........:.......:x.x...::...:..x.... 26M1D6M4D92M 98/124 79.0% 124/94230402 0.0% 5/124 4.0% 77593474 NA +3000 chr4 + 190214555 113666568 113666567 113666619 52 TACACACACATGCATGCACACACACGCACGCATGCACACACACGCACACGCA chr4 - 94230402 90815421 90815420 90815472 3414931 3414930 3414982 52 TACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA .......:..xx::........:..:x..:..........:.x......x.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 22851147 NA +3080 chr4 + 190214555 113688858 113688857 113688956 99 AATGACCATTGAAGAAAAAAGAGCAAAAACAGATTAATATACAAAGAAGATGCAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAGCACACTAAAAAAAAA chr4 - 94230402 21758935 21758934 21759030 72471373 72471372 72471468 96 AATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAG---ACAAACAAGAAA .....:x.x.:x:x...x...x::.....:.x:.x.xx...x.....x.xx..x..:........:....:........:::..---..x..x..:... 84M3D12M 65/96 67.7% 96/94230402 0.0% 3/96 3.1% 91929923 NA +3414 chr4 + 190214555 113726531 113726530 113726625 95 ATTACCATGCCTGGCTAATTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGGTCAAGATGGGGTCTCACTATGTT-----GCCCAGGATGGTCTTGA chr4 - 94230402 79586923 79586922 79587020 14643383 14643382 14643480 98 ATTAC--TGCCTGGCTGAGTTTGGGTTGTTTTTTTTTTTGTTTGTTTGTTTTTCCTTTAAACAGGCTCTTCCCCTAATCCCAAACCCAAAATAATCTTAA .....--.........:.x...x.x......x...x.................xx.:x.:.::..x...:x.:x.:x.-----:....::..::....:. 5M2D71M5I17M 67/93 72.0% 98/94230402 0.0% 7/93 7.5% 34139608 NA +3360 chr4 + 190214555 113732204 113732203 113732268 65 GCCTCAAACTTCTGGGCTAAAGTGATCCTCCCACCTCAGCCTCCCAGGTAGCTGGAACTATAGGT chr4 - 94230402 18197131 18197130 18197195 76033208 76033207 76033272 65 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT ...:x..:........:.x.....x.:.x.xx:x........::..:.............:.x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 95535073 NA +8248 chr4 + 190214555 113759304 113759303 113759425 122 GGTTGAAA-ATACCCACCCCTAGCAGAAAGCTTTTTGGTGTTGATAATTTTGGCAGCATATTCTTGTCCAGTAGGAATTTTCATACATCTTCTCACCACTGAGAATGCCCCCCTGGAAACCAA chr4 - 94230402 36130263 36130262 36130385 58100018 58100017 58100140 123 GGTTGGAATATACCCACCCCTGGCTGAGAGCTTTTTGGTGTTGATGATTTTGGCAGCATACTCCTGTCCTGTGGTGATTTTCATACATCGCCTCACGACCGAGAACGCCCCTCTGCAAGCCAA .....:..-............:..x..:.................:..............:..:.....x..:.x:.............x:.....x..:.....:.....:...x..:.... 8M1I114M 103/122 84.4% 123/94230402 0.0% 1/122 0.8% 77629041 NA +3122 chr4 + 190214555 113809149 113809148 113809265 117 CTTCCATTATCCAATTTAGACGTGACCTAAATAACTCCAATCAAAAGAGCAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCCCTTCTCAAAGAAAAAAAAAAACTAAAAAAA chr4 - 94230402 65902094 65902093 65902202 28328201 28328200 28328309 109 CTTCCACTGTACTACCAAG--------TAAAGGACTTAGTTCAGAAGAGCTAGGAAAAAAAAAAAACAAAAAACAAAAACCAGATCCACTGTCAGTGATACACACACACAAAAAAAA ......:.:.x.x.::x..--------....x:...:x:x...:......x.::.........x..x......x..x..xx.:.:..x:.x...:x..x.x.x.x.x..x....... 19M8D90M 73/109 67.0% 109/94230402 0.0% 8/109 7.3% 47907055 NA +3229 chr4 + 190214555 113809193 113809192 113809246 54 AAGAGCAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCCCTTCTCAAAGA chr4 - 94230402 29007709 29007708 29007762 65222641 65222640 65222694 54 AAAAGCAAAAACAAACAAACAAAAAAAAAAAGCAGATAACCCTCATCCCAGAGA ..:........x...x...............:..:.x..x..:.x..:..:... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 84801484 NA +3249 chr4 + 190214555 113809198 113809197 113809260 63 CAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAACCCCTTCTCAAAGAAAAAAAAAAACTAA chr4 - 94230402 27568612 27568611 27568674 66661729 66661728 66661791 63 CAAAGAAAAAAAAACACTAAACAAAACCAAACAAAACCCATTCCAAAGAACAACAGAAAATAA ....:...........xx...x....x....x...x...x.::.......x..x.:...x... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 86240586 NA +4872 chr4 + 190214555 113843122 113843121 113843327 206 AAGGATTTTCTTCCTCACCCCATGCATATTTAACTAGTGGAACCAGATG---AGATC------CAGCCTTTTGGGGAGGTATTCAAAAGCATTTTCCTTAAAACACATCCATAGTCAATGCCCTTTCCCTTAAAGTAATTCATAATGAACCCACAAAGGAATAAAAAACAAATGAGGCA-------AATGGAAATTTATTCAGTTAGATTTTAACTTTTTAT chr4 - 94230402 36157697 36157696 36157907 58072496 58072495 58072706 211 AAATACTTTTATTCTCTCC---TGCATATTTAGCTGAAGCTAGCAGATGCTTAGCCTGCATGTCAGCCCTCCAGGGATGGAGCCATAAATGTCTTCCTCAAAAC-----TGCATTGAGTACCATTCCCCTTGCAGCAAAACTTAATGACTTCACATAGGAATCAAAAACAAATGAGGCCCCTTACTAAGAAGAACTCA---AGTTATAGTTTACTTTCTTAT ..:x.:...:x.:...x..---..........:..::x.xx.x......---..x::------.....:.:::....x.x.x:..x..:::.:.....:.....-----:::.x.x.:.:..x..:.....:x..:..xx.x......x::....x......x...............x-------..x:::..:.:.---.....x.x....x:..:.... 19M3D27M3I5M6I41M5D70M7I12M3D21M 132/195 67.7% 211/94230402 0.0% 27/195 13.8% 77685425 NA +3559 chr4 + 190214555 113862095 113862094 113862211 117 TACAGATTCAACTAAATTTTTGTAAC-------AAAATACATCCTTTCACAACTACCTAAAATAATACAAAATGTGAG--CTCTTGAC-----ACCTGTGAAGTTTAAAGAAAAAATAGTTGGTGGTTGCA chr4 - 94230402 36164156 36164155 36164281 58066122 58066121 58066247 126 TGCATGTTCAAGTAATTTCACTTGACCAAATGCAAAATACTTTCCTTCACAGCTGCCCAAAATAATACAGGATTTGAGCTCTCTTAACTCTTACCCTGCAAACTCCAAGGGGAAATTA-----TGATTGCA .:..x:.....x...x..:x:x.:..-------.......x.:.:......:..:..:...........::..x....--.....:..-----x....::..x.::..:.::...x..-----..:..... 26M7I45M2I8M5I25M5D8M 81/112 72.3% 126/94230402 0.0% 19/112 17.0% 77697939 NA +3390 chr4 + 190214555 113864437 113864436 113864493 57 GATATGTGCGTGTGTGTGTGTATATATATATATATATATATGTTACATATAATATGT chr4 - 94230402 40224673 40224672 40224729 54005674 54005673 54005730 57 GATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGT ...x.x..:..........:.:........x...:....:....xx.......x... 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 73639764 NA +3663 chr4 + 190214555 113876610 113876609 113876688 79 CTGCAACCTCTGTCTCCCAGGTTCAAGTGATTCTCGTGCCTCAGCCTTCCAAGTAGCTGGGGTTGCAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.::..........x...x.:x.x.........:...........:::.:..--.:........ 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 95679484 NA +3205 chr4 + 190214555 113894013 113894012 113894083 71 TGTATATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGTATATATAT chr4 - 94230402 52481236 52481235 52481306 41749097 41749096 41749167 71 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATAT .::..:x.....x.:...:..:........:...:.:::...:xx..:..x.:x.........:.x..... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 61412777 NA +3210 chr4 + 190214555 113894017 113894016 113894097 81 TATATATATGTGTATATATATGTATATATATGTGTATATATATGTATATATATATGTGTATATAT--ATGTATATATATAGAC chr4 - 94230402 35554958 35554957 35555040 58675363 58675362 58675445 83 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAAC ..x......x..x:.:.:.:..:.:....:x.............:...:.x.x.......x.x..--.x..x:.x...:.:.. 65M2I16M 58/81 71.6% 83/94230402 0.0% 2/81 2.5% 78339059 NA +3331 chr4 + 190214555 113894037 113894036 113894109 73 TGTATATATATGTGTATATATATGTATATATATATGTGTATATATATGTATATATATAGACGTATATATATAT chr4 - 94230402 37363040 37363039 37363111 56867292 56867291 56867363 72 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTAT ...:..:...:x........:...:.:.x......xx..:.....:.....:...x:.x..::.-....:... 64M1D8M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% 76530997 NA +3122 chr4 + 190214555 113894075 113894074 113894130 56 TATATATATGTATATATATAGACGTATATATATATGTGTATATATATATATGTGTG chr4 - 94230402 65232559 65232558 65232614 28997789 28997788 28997844 56 TATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTG .........::...:....x...xx...:..:..........x.x:...:.:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 48661516 NA +3083 chr4 + 190214555 113894090 113894089 113894183 94 ATATAGACGTATATATATATGTGTATATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATACAC chr4 - 94230402 4417343 4417342 4417436 89812967 89812966 89813060 94 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC ..x.....:......:.:.:::::.:.x:x.:...:.::..x.x..x..:.:..:...xx.x::..x..x.....:.:....x...x....::. 94M 58/94 61.7% 94/94230402 0.0% 0/94 0.0% 109476747 80737808 +3019 chr4 + 190214555 113894115 113894114 113894182 68 TATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATACA chr4 - 94230402 35554958 35554957 35555025 58675378 58675377 58675445 68 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCA ..x......x..x.........:::....:x:.:.........::...:.x.x..:.:..x.x..x.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 78339157 NA +86478 chr4 + 190214555 113901161 113901160 113903727 2567 AGAAAAGCCACAGTAAATTTTCT--AGTGCCATAAAG-TAAATCATTTTAATAATTAAGATACATAAATAGTTTATGATAGA----------------AACAATAAAGTTGTCTCAACTCTGCACAAACATTGAA---TTTCCAAGTAATTTGTAAGGAATATATTCATCTTATTACATTCAAAATCTTGGTTGAACAATGACGATTATAAAGTTTT--CTGAATGATGTTTTTTATAGTCTGAATTCACACAGTAT-TACATTAATTTATAGTATTACAGTGCT-TGGTAATTTGAAGAAATGAAATAAAATTATTCTAATGGTATGCAGGAAATAAAAATAAAA--TAAAGT----------------CATTTGCATAAC-------------TTTTTATA-AAAACAACAAAATATTTTTCTGTAAAAATAAATTAGGTTTTTTAT--ACTGAAATGTTCTTCTAGTAAAGTGTTTAGAAAATAGTTACATTCATTGTGGGCAGTGTGCTCAAACATTCTTATTTGCCATTCCCTCACGCATGGTAAAATG--------AGGTGCAAGCTGTTCACATGTGAGAAAAACAGCTTTTC---------ACAGGAAAAGAAACATATATATATATATAAAATAGAATTAATTAAAAAACCCAAGTGTCATAT----GACAGACATACAAAAATTCACCAAGAAAAT-----------ATATTCTTC------AAGGCCTTTGAGGTGACAC----------AATCTTTGACTGTAATTTATCAAAGGTAGTTTTAATCATGCTACCCTGTAACTTCCATCAAATTAGCATGCTTGCGGATGGTATACCCTGTAACTTCCATCAAATTAGCATGCTTGCGGATGGTAGGTTATTGTTCTCCTCCTATAATTCA-------------------AAGCAGTGTTTGGTCAGTTGACTGAAGCACAG-CAGTGGAACTCAGGACTCACCACGTTTTCTAAAGGAGCAAGAGAAATAAACATCTCCACTCTCTCTA-AGTGTGGCT----TGCAAGAGTAGCACCTTGGCACTGAGCAGGACAGTTTTCAGTGTGGCGGCCAG---GTGGCAGAAGTCTCTGGAGTGGCACAGCATGAAAACAAGCCTGACGCTTAGGCCAGCGATATTATCGAGCCAAATTTGCTGGTTTACCTAG--GAAACAGATGAAAGATAAG---AACTGATTAAAGTTTAACCAAACAGGAAATATTTGT-GCTTATCCACAAGTAACACCTGAATGGCAAGTTGAACCTGAGACTGCTTTCTGCTGTTTCTTCTTCTTTTTTTTGCTTTTCTTTTGCTTTTTCTCAGCCTGATTTTTGCTTGGCTTCTTTTTCTTGGTTTCCTCTTTATACCATGGTCCCCAGACCCCTCCATTGAGCCTAGGGTTACTTCTGGGGTCTTTGGGGGGATACCTGACCGGCACTGCAGTTTTGTTGAACTGTGAGAGCCTCCGTAGGAGCTTCTTCACGATTCCTGGATACCTGTTAGATAGGTCCACCCTCTCATATGGGTCGGCTGTGATGTTGAAAAGCCATACACTTTTGCCAGTTGACAAGGTGATCCGTTCATTGTGCCACCGGTTCGGTCCCAGGTTGCTGAAAGACTGAGGGGGGACCCAGTCGCTGTAGCCAGGATTTCCTGTAAGCAATTTCCAGTGCTGCACTCTGATGGCTGACTGGATTGCAGTGTTCCAGATCCCATAGCCTGCTGCCCAGGAGCCATTTTTTGCCTTGGTGTATATGGGGTCAATGTTATGCAAAATATCTACTCGGGGTGAGCGAAGACCCTCACTTATGGTCTCCCAGATATCATAGCCATCTAGTTGAATGTCCTCATCAATCTGTCCTTCAGCCAGTGAAATGAGAGTGGGGTACCAGTCAGTGATGTGCACAAGTTCCTTACACACTGTTCCCTTGTTTTTCAGAAGTGGGCTATGCACAAAGCCTACAGCCCGGATCCCTCCTTCCCAATATGTTCCTTTGCTACCTCTGAGAGGCCAGTTACTCCCTCCTGCCGTAGGCTGGCCACCATTATCTGAAGAGTAAATGATAATGCTGTTGTTATAGAAACCATAAGTCTTTAGAGCCAATGTCACGTTGTTGATTGCTTCATCTAAGCAGGAAAGCATGGCAGCATATCTCCTCCTGTTTATGTTGATAATGGATCGGTAGTGTTCGAAATACCTGCCAGGAGCTTGCAGTGGTGAATGAACAGCTTGATAGGCAATATATAAAAATATAGGCTTTGTGGGGTTATGGGAAGCTAAGATTTGCTGTACTCTCTGAGTGTACATCTGTGTGGAGTATATGCCATTGTCATAGTCCCAGGCAGCATTGTCGTTTTCATACAAGTCATAGCCACACATCCCAGGACTGTCACATTTGTAGTGTGTATAGTAATCCCCACTTCCCAAAAGGGAACCAAAAAAGGTATCAAATCCTCTTCTGGTGGGCATGCATTCTTTTCTGTAAAAACCCAAGTGCCATTTTCCGACCATATGCGTTGAATATCCAACCTCCTTCAGTTTCTGAGGTAGGGTGGCATTGTCCAGAGGTAAACAGTTGGGTTGGGTAGGTCTTATGATAGAATGTTGAAGTCCGGTGTGTATCTGATACCTTA----AGAAAAGAGAAAAAAATTGTTATCAGGGCAGGATAAAAGAGATATTCT chr4 - 94230402 36183252 36183251 36185834 58044569 58044568 58047151 2583 AAAAAAGAGACGGACTACTTTCCTGAATGCCATAAAAATAAACTATTTTAATAGCCAC-ATAAATAAAAAGTTTAAAGTAGATTTTTTTTTTCCCCAAAACACAAAGATGGCCTAGCTTCTGTACAGAAACTGAACAATATTCACGTGACAATTAA-----ATAATCACTTTGTTACATTCAACATAATTGGAGGCAAATACATATTGAAATGATGTACCTGAATCATTCTCCTC----TCT-CATCCTAGCAGTGTCTACAGCATTTTCTTGTTTTACAGTACTCTGAGGATGTGGATCTGTTGAATAAAACTCTG--AATGACTTAGTGAAAATAAAATTAAAAATCAAAGGAAAAACAAATAAACAACCCTTGCATCACCCACTAATTAGAGTTTTAATGGAAAAGAAGAAAGTATTGTGCTGTAAAA-TAAATTACGTCTTGCATGTACTGTAGTATAGATATCTTAAAGTGTTTAAATA----TTACATTCACTTTGG-TGATGTGCT------------TTTGCCTATGCCT-----ATAATAAATTATACGTGGCATGTGCTAGTTATTCATGTGTGCTGATAACAGCCTTCTGGTTTTACTACAAACGAGGAAAGGTTAGCACATTTAGGGAAT--------TTGAAAAGTGTTTCTGGTTTATCTAAGAGAGACACAGTCTAATTCA--AAGCAGCTTTCCTACTATCATGTTCCTCTCCCCCACGCTCCCAAAAAAGTTACCACTGGCTTCAATTTTTG-CTGTGTTTTATCAAAAA-----------ATGTCAC--------------------AGGTTGCTGGCTAAC-----ACTCTCAGACCTACAG-AAGTTCTCAAGCTTT----------GTTTTTCCTTTCTCTCTATGAATCACCTGCCACTGCAGACTCTCAAAAAATTCTTGCCAATTCAGGCAAGGAACAAACATTTGTCCATCAAA---AACGGGCCTTCTGAAGT-----TAGGAGTAATTGTGTTC---TTATCTGGAATGTAGCTGTGATGGAAGAGCACCATTCTTCTTGTAGAGGAGAAAGTCTGTCACGTGGATGTTTATGCATGTTTGAGGCATGTGAGATGACA---------------------GCTT---TCCTCCATAGTGCAGAGCAGGCGTTTCTGGTATATTCTGTCAGAATTCAAGGAACTTGGGCCAAGCTGCCTTAGGCTTGGCAAAAACTAGCATGCTCGAAGTCTATCCACCAGCAAGACGTGATCGGCAATGTAATGATTGTCCTtttttcctatttgcttttttcttgttcttgttcttcttttgcttattagcacctttacttttatctgacttcttcttcttttcatcctcttTAAACCACGGACCCCAGACTCCTCCATTCAGCTTTGGGTTACTCCGTGGGTCCTTAGGTGGGTACCGAACAGGAACCGCAGTCTTATTGAACTGTGAAAGCCTCCTCAACAGCTGTTTCACTACGTCAGGATACTTTGCAGAGAGGTCCACCCGTTCGTATGGATCAGCAGTTATGTTGAAAAGCCACACGGTTTTGCCAGCTGACCAAGAAACACGTTCATTATGCCAGCGGTTGGGGCCCACGTTGCTGAAGGCCTGCGGAGGAACCCAGTCGCTATATCCTGGATTTCCGGTCAGTAGTTTCCAATGATTCACTCTGATGGCAGATTGAATTGCAGTGTTCCAGATCCCATAGCCAGCTGCCCAAGACCCATTTTTGGCTTTGGTGTAAATTGGGTCAATGTTGTGTAAGATGTCTACCCGTGGAGAACGTCTGCCTTCGCTAATGGTTTCCCATATATCATAGCCATCTAGCTGGATATCTTCATCAATCTGTCCTTCGGCCAGTGTGATCAAAGTGGGGAACCAGTCTGTGATGTGCACAAGCTCCTTACACACAGACCCTTTGTTTTTCAGAAGGGGGCTATGGACAAACCCAACAGCACGGATACCTCCTTCCCAGTATGTCCCTTTGCTCCCTCGGAGAGGCCAGTTACTTCCTCCAGCCATTGGCTGGCCACCGTTATCTGAAGAATATATGATAATGCTATTGTCATAGTAACCATACTTCTTTAAAGCAAGGGTTACGTTGTTTATGGCTTCATCCAAACAAGCTAGCATCGCAGCATATCTTCGCCTGTTTATGTTATTTATGGATCGATAATGTTCAAAATACTTTCCTGGTGCCTGAAGAGGTGAATGAACAGCTTGGTAAGCAATATATAAGAATATAGGTTTCCTGGGATTGTGAGAAGCTAAGATTTGTTGCACTTTTTGCGTGTACATCTGTGTGGAGTAGATGCCATTGTCATGATCCCAAGCTGCATTATCATTCTCGTACAGGTCATAGCCACATATTCCAGGGCTGTCACATTTGAAGTGAGTGTAATAGTCACCGCTGCCTAAGAGTGAGCCAAAGAAAGTGTCAAATCCTCTCTGTGTGGGCATGCATTCTCTGCGATAAAACCCCAAGTGCCATTTGCCAACCATGTGTGTTGAGTAACCAACCTCCTTCAGCTTCTGAGGTAGCGTGATGTTATCCAGAGGTAGGCAGTTGGGCTGGGTTGGCCGTATAATGGAGTGCTGAAGGCCGGTGTGTATCTGGTACCTGGGGGCAGGCAGGAGACAGACATTTGTATCA-GGCAGGGGGAAAAGGAAACCCT .:.....xx..:.xxx.:....:--.:.........:-....::.........:::.x-...x.....x......x::....----------------....xx..::.x.:..x:x:....:...:.x.:....---.x.:..x..:.:xxx...-----...x...::..:..........x..xx.x.xx.:xx...:xxx...:x..x.x.x.--......x..x:.::.:----...-x..:.xx:....:.-....x:.x...x.x..x.......:..-..:x:..x..:.xxx:.x:.......:.x.x--....::x.:xx.:........x.....--:....x----------------.x:......x..-------------....x..:-....x..x...:....x.x........-.......x..:..x:..--....x.:.:.xxx.x.xx...........:.x.----.........:.x...-:::......------------......xx.x...-----..::....x.:--------.x....x..:.:....::....xx:.x......:..::---------...::x:.:....x:.xx::.:..x..x::...--------..:....::x:xxx..x:x...----..x.....:.xxxx......--...x.:x.-----------..:...:..------.x.x:.::x:.::x.x:..----------...:....-....:x.........::-----------...::..--------------------..xx....x..x:.:-----..:..xx:..:.x..x-..:..xx..x....x----------...x..x:.:..:::....:.x...-------------------..:x.:.x:...x:x.x.:::x::.:.x...:-..x.x.xx.x:x::.---.x.:x.::....:...x-----x..:.:...x::.x.:.---:.x...:-.:...:...----..x.....:.x..:::.xx:xx.:::x::..x...:.x:x::....xx.::x:---:..x:x..:.:x.x..:::..:..---------------------....---:.xx.x...x.::x....x::xx..x.....x..:::x.--::..:xx.x.:..xx.::.---.:...x:.x.:.:..::.x...xxx::x..::.:.x-.::.......x..:..x..x...x:.....xx.:.xxx.x:xx..x:....:xx.x.x::..:.....x..:...:.:...........x..xx..x.:.x.:....:::..:......:.....xx:x.........x....:..x........:........x...:.x........:.xx.....:..:..x..:....x:..x..x..:.....:..:...........:.......x:.:x....x:.....x.:x:.x......:.xx:...x..........x:..:.....:..:..x..x..............:..:x.........:....x.:.x:.:x........:.....x.....x..x....x.........:.x...x..:..:...........:..x..x........x..x..:.:......:..x.x............x..:..:..........................x........:..x........x..:........x..x...........:..:..:..:.....:..x..x..:..xxx:..:..:..x.....:.....x.................:..:..:..:.................:.......x:..x.:.......x.......x..............:...........x.x:..:..............x........x.....x..x.....x.....x...........:.....:........x....x...............:.....x...:.x...........:...........:..x...........:....:....x.......xx......:...x.:x..:........x..x........:..:..:.xx.....x...........:.x............:x.x........:..:.....:......:.x..x..x..:..x..x.................:..:...........:........:..:x....:..:..:..............:..:...:.:..x....................x.............::.....:..x.....:..:..:..:....:............:..:.....:............x....x..:..:..:..x..:..x..:..:..x..:.....:..:..:...........::xx...............:.x.x:.....x..............x..:.....:..:.....:..x..............:...........x...:::..:..........::........:.....x..:.x...:..:..:..:.....x..............:.....x:----..:x.:....x.:.x...xx.....-......:x:...::..x.::.. 23M2I12M1I20M1D23M16I37M3I18M5D56M2I16M4D3M1D14M1I27M1I31M2D27M2I6M16I12M13I8M1I27M1D17M2I33M4D15M1D9M12D13M5D11M8I38M9I33M8D22M4I20M2D8M11I9M6I19M10I8M1D17M11D7M20D15M5D16M1D15M10D25M19I32M1I15M3D17M5D17M3D7M1I9M4I53M3I24M21D4M3D39M2I19M3I36M1I1408M4I25M1D22M 1747/2437 71.7% 2583/94230402 0.0% 276/2437 11.3% 77717909 NA +3452 chr4 + 190214555 113905743 113905742 113905815 73 CTGCAACCTCTGCCTCCCGGGTTCAAATGATTCTCCTGCCTCAGCCACCCGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.:........:..x...x.xx.x.......x::.:...........:....x..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 95708617 NA +3247 chr4 + 190214555 113912736 113912735 113912820 85 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATAAAGAGAGAAAGATAAAGAAAAAATGTATACATATATGACAATCTGTTGAAC chr4 - 94230402 32272587 32272586 32272671 61957732 61957731 61957816 85 TATTTTTGTGTGTGTGTGTGTCTGTGGAAGCCTCATAATAGAAAGAGAAAAAAAAAAAGAGGAAATACAGGATTATCTCCTGAGC .:.x.x...............x....x:x..x.x.x:.x.......x...:......x.x:x.x...:.x..:x....x:...:. 85M 59/85 69.4% 85/94230402 0.0% 0/85 0.0% 81640149 NA +3538 chr4 + 190214555 113924018 113924017 113924121 104 TCTACATATATATATATAAATATATATAAATATATATA-------AATATATATAAATATATATAAATATATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 19637074 19637073 19637184 74593219 74593218 74593329 111 TTTACAGGGAAATGAATAGATTTCAGTAAATGGATACAGAAAGTTAAGATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATA .:....x:x.x..:x...:..x.xx:.....:x...:.-------..x..:x......::........xx.......:....x...x...::..:.x...::....::... 38M7I66M 71/104 68.3% 111/94230402 0.0% 7/104 6.7% 94286944 NA +3249 chr4 + 190214555 113924021 113924020 113924113 93 ACATATATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATATATATATATATATATATATATAT-ATATA chr4 - 94230402 64944124 64944123 64944217 29286186 29286185 29286279 94 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATGATATA .....x...::........x...:.:....:....x..x.:.:x:.x.:...x.xxx...x.:.....::x.x.:::.:...:.....-..... 88M1I5M 63/93 67.7% 94/94230402 0.0% 1/93 1.1% 48979897 NA +3049 chr4 + 190214555 113947528 113947527 113947660 133 GGGAGGGAGGGAAGGAAGGAGAGAGGGAGAGTGAGGGAGGGAGGAAAGAAGGGAAAGGAAGGAAGGAGAGAGGGAGAGAGAGGGAGGGAGGAAGGAAGGGAAAGGAAGGAAGGAAGGAGAAAAAATTGAAAAA chr4 - 94230402 57300994 57300993 57301126 36929277 36929276 36929409 133 GGAGGCGGGGGAAAGGTGGGACAAGTGGGAATGTAGGGAAAAAGGAAGAAATGTTTGGAATTTACGAGAAAACGTGGGAACGTAGGAGAAAAGGTAGGGAAAATGTAAGAATGTAGGGGATAATGTGGGAAAA ..::.x.:.....:.:x..::x:..x.:..:..x:..::::.:.:.....:x.xxx....xxx.x....:.:x.x.:..:x.x::.:..::.:.x.:..:...x.x.:...x.x...:..x..x:.x.:.... 133M 74/133 55.6% 133/94230402 0.0% 0/133 0.0% 56646534 NA +3383 chr4 + 190214555 113952136 113952135 113952210 75 CATAGTGTACCGCAGCCTTAAACTCCTGGCCTCAAGCAATCCTCTCATCTCAGCCTCTCAAGTAGCTGGCACCAC chr4 - 94230402 18197117 18197116 18197191 76033212 76033211 76033286 75 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC ...x:...x.::.....:x..:..:....x:.....::x.:.x.xx:x........:............x..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 95755019 NA +3082 chr4 + 190214555 113978438 113978437 113978477 40 TTCCAGTAATAAACTGACTCCTGGATGGTGTGCAAATAGG chr4 - 94230402 36222722 36222721 36222761 58007642 58007641 58007681 40 TTCCAGTGATAAATTGGCTTCTGGATGGTGTGCACATAGG .......:.....:..:..:..............x..... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 77755716 NA +3141 chr4 + 190214555 114008601 114008600 114008676 76 TTTTTTTTTTTTTTTTTTTTCTTAGGATTGCCTTAGCTATATGGGCTCTTTTTTGGTTCCATATGAAATTTAAAGT chr4 - 94230402 91581066 91581065 91581141 2649262 2649261 2649337 76 TTTTTCTCTTTTTTATTTTTCTTAGCATTCTCTCAACTATGCAGCTCTTTTTTTATTGCTATTTCTATTTTGAAGT .....:.:......x..........x...x:..:.:....:::.x:::......:x.x.:..x.xx.x...:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 22427535 NA +3322 chr4 + 190214555 114030841 114030840 114030954 114 CAAAATACA-ATGTAACAATTTTATGATAATATCTATCATATGAATACATAAAGCAGGCATACAGAGCTGTAAATCATTTATATATACACACACAAACATATAACTATATATAAC chr4 - 94230402 78881513 78881512 78881613 15348790 15348789 15348890 101 CAAAATACACATATTGAAATTT-------ATATCTGCAATATGCTTTCAAA-------CAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATAGAAC .........-..:.x:x.....-------......::x.....xx.x..x.-------..x...x.x:....:..x...x.........:.......:.....xx.:....x... 9M1I12M7D22M7D57M 76/100 76.0% 101/94230402 0.0% 15/100 15.0% 35149328 NA +12907 chr4 + 190214555 114034108 114034107 114034465 358 AAGATTTTAGATGGACATGGATGTGGAACAAAAGTAAGTTCTATTCTCAGGTGAACTTACATTT--TTCGCAGCTGTAGATAAGCAGTAATTGAAGTGAAAAACT---GTCTCCTCTCTCCTGCCTTTGGGATGTAATGGCCATGCAGGTGTCTTTTTGCCAACTCTGTGCTCTTGACAGTGTTATTA-GCTCAAAATCACCAGGGACAAAACATTTTATACAAGGAACAGACATGCTTTTATACTACTAAATGAGCTTTCTGGGCTTTCTAACACTGCCAGTTTTGTATAAAGGTGGATGCCTACCTTGTGGAGGAACATTAAT-AGCAGGGAATTCAAAGCAACCATTGTTAGAAGCTTGTAT chr4 - 94230402 36234169 36234168 36234521 57995882 57995881 57996234 353 AGGACTTTAGACAGACACAGTCCTGCAATAAAATCAAGCTGCTCTCCCAGGTGAGTTAGCATTTCCTTCACAGC---AGATAGGGAGTAATTGAAATGAAATCCTCATGTCTCCTTGCCCTCCCATTTGGGATGAATTACCTGTGCAGATGCTTCATTGCCAGCTCTGTACTACTGACAGTATCATTAAGCTTACTTCCACTAGGGACACATCTTTTCATAGACTGAACAGTAATACTTTTATACTACCTAATGAGTTTTGCGG---------TGTTGCATGTTATGTAGGGAAGCAAATACCTACCCTGTGCAGAAAAAGGAATGGGCAGAGCATTCAAAGCACGCATTGTTAAAGGTCTATAT .:..:......::....::.x:x..x..:....x:...:.x:x:..:.......::.x:.....--...:....---.....:.x..........:.....xx..---.......:x.:.::x.x.........x.x.:x.::.....:..::.:x......:......:..x:.......:.:....-...:.xxx:...:.......x.x.x...:...x.xx......xx..:............:x......:...x:..---------:::...xx...x....x::.:.:::..:......:....x..:..x.xx...-:....:.x..........xx........:.:.::.:... 64M2I8M3D28M3I80M1I75M9D52M1I39M 242/346 69.9% 353/94230402 0.0% 19/346 5.5% 77799939 NA +3244 chr4 + 190214555 114039438 114039437 114039507 70 AATAAAAATTTAAAGGAAACATTTTAAAACTTAGATTATTTATTTCCTC-------CTCAATTGGTTCAGGGAATTT chr4 - 94230402 86487365 86487364 86487441 7742962 7742961 7743038 77 AATAAAAAGTTAAAGGAACCATTTCAAAATTGACATTAGTTATTTCTTCTTGTAAGTTCATTTGTTTTAGGACAGTT ........x.........x.....:....:.x.x....x.......:..-------:...x...x..:...:x.x.. 49M7I21M 55/70 78.6% 77/94230402 0.0% 7/70 10.0% 27552073 NA +3059 chr4 + 190214555 114080818 114080817 114080877 60 TCTCCACCTTCCCTGCCTTCTTTTGGGGACTTAAATTACATGTAAATTAGGCTACTTGAT chr4 - 94230402 48883348 48883347 48883407 45346996 45346995 45347055 60 TTTTTAGTTTCTCTGCCTTCTTTAAGAGACTTAAACTGAATGAGGATTTAGCTACTTGAT .:.::.x:...:...........x:.:........:.:x...x::...x:.......... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 65197470 NA +3258 chr4 + 190214555 114121857 114121856 114121939 83 TTCTACATTTTTTCTTTTTTCTTTTCTTCTTCTACTTTTTTTTTCTTTCTTT-CTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 8174018 8174017 8174101 86056302 86056301 86056385 84 TTCCAAATTTCTGCTTTTTTCTCATCCTCTGCTAATTTTTCTCCACTTCTTTATTTTCTTTTTCTCGCTTCCTACTCCTTATTT ...:.x....:.x.........:x..:...x...x.....:.::x:......-:.......:.:..x:..::.x:.::..x... 52M1I31M 57/83 68.7% 84/94230402 0.0% 1/83 1.2% 105947839 84266716 +3032 chr4 + 190214555 114121891 114121890 114121948 58 CTTTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGAGAAGGAG chr4 - 94230402 39136251 39136250 39136308 55094095 55094094 55094152 58 CTTTGTGTTTTTTAATCTGTTTCTTTCTTTCTTTTTTTTTTTTGTCCTTGTGGAAGGG ....x.x...:..xx.:.x........................x.::...x.:.:.:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 74985640 NA +3025 chr4 + 190214555 114223769 114223768 114223826 58 CCTCATGTGCCACTCCAGTCTTATCTTCACCATTTCCTAATGCACTCTCTGTCTCCAG chr4 - 94230402 43397799 43397798 43397856 50832547 50832546 50832604 58 CCTCATGTGCCGCTCCTGTCTGGCTTGTGCCAATTCCTAATGCTTTCTGCCTCTCCAG ...........:....x....x:::.x::...x..........x:...x:x....... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 70825970 NA +3594 chr4 + 190214555 114235432 114235431 114235489 58 TGTGTGTGTGTGTGTGCGCGTGTATATATATATACACACACATATGTACACGCACACA chr4 - 94230402 14964826 14964825 14964883 79265520 79265519 79265577 58 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:...x..:.....::.:.......:......:.xx......:...:....:...... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 99270606 90943949 +4481 chr4 + 190214555 114235434 114235433 114235566 133 TGTGTGTGTGTGTGCGCGTGTATATATATATACACACACATATGTACACGCACACAT----ATATATGTCTATGTATATATATGTGTGTGTATATATATGTGTGTGTATATATATATCACATGGAATATATATATCC chr4 - 94230402 25393260 25393259 25393391 68837012 68837011 68837143 132 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatata-----CACATGAACTGTAACTATCC ......::.....::.::.....x.:.:.:..........:.:.:.....:x.x:.:----.:x..xx.::x..xx:x.:::..........x:...:.:...:........-----......:.x.:..xx..... 57M4I51M5D20M 86/128 67.2% 132/94230402 0.0% 9/128 7.0% 88842174 NA +3014 chr4 + 190214555 114235440 114235439 114235491 52 TGTGTGTGCGCGTGTATATATATATACACACACATATGTACACGCACACATA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .......::.:..:x.:.x.....:.....:x........::.:........ 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 64820688 NA +3149 chr4 + 190214555 114239281 114239280 114239334 54 TTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTTCCTTTTTTTTTTCTTTTTTTT chr4 - 94230402 84759163 84759162 84759216 9471187 9471186 9471240 54 TTCCCCTCCAACCCCCCCCCCCTCCCTCCCCATACCCTTTTTTTTTTTTTTTTT ..:......xx...:...:....:...:..:x.x.::........:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 29480118 NA +3163 chr4 + 190214555 114239303 114239302 114239368 66 TTCCTTCCTTTCCTTTTTTTTTTCTTTTTTTTTGGGGGGGCTCAGACAGCGTCTTGATTTGTCACC chr4 - 94230402 24368502 24368501 24368567 69861836 69861835 69861901 66 TCCCTTTCTTTCCTTTTTTTTTTTTTCTCCTTTTGAGAAATTTAAGCAATTTTTTAATTTATCTCC .:....:................:..:.::...x.:.::::.:.::..::x.:..:....:..x.. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 89870801 NA +3009 chr4 + 190214555 114251040 114251039 114251098 59 TCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATAAAAAAAGAGAAAC chr4 - 94230402 71886275 71886274 71886333 22344070 22344069 22344128 59 TCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAATGAAGGAC ...:.x...:.........:.......:.....:x.:..x.....x::...x..:::.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 42364765 NA +3321 chr4 + 190214555 114298617 114298616 114298693 77 TGCAACCTTCACCTCCTAGGTTCAAGAGATTCTCCTGCCTCAGCCTTGCAAGTAGCTGGGATTACAGGCAC-CCACCG chr4 - 94230402 18197127 18197126 18197204 76033199 76033198 76033276 78 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG .:..:..:xx.x..:..:........x.x...x.xx.x.........x...........:.:....x.::.-....:. 71M1I6M 56/77 72.7% 78/94230402 0.0% 1/77 1.3% 96101490 94113065 +3729 chr4 + 190214555 114305649 114305648 114305726 78 CTGCAGCCTCAACTTTCTGGGCTCAACTGATCCTCTCACCTCAGACTTCCAAGTAGCTGGGACTACAGCGTGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA-CGTGCACCAC ..:.....:x..x:.......:....x..x.:.x.xx:x.....x...:...........:......-....::.... 67M1D10M 58/77 75.3% 77/94230402 0.0% 1/77 1.3% 96108523 94106032 +3295 chr4 + 190214555 114315853 114315852 114315901 49 ACTCTGTCTCAAAAAAAAAAAAAAAGAAAAAGAAAAAGAGCATGTGGTA chr4 - 94230402 41477426 41477425 41477474 52752929 52752928 52752977 49 ATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGTGGTA .:.....x.:....................:.:....:..xx....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 72838427 NA +3075 chr4 + 190214555 114353030 114353029 114353131 102 TTTGCATCAATATTCCTCAGAAATATTGGCTTGTAATTTTCTTTCTTC------------CTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGATGTGTCT chr4 - 94230402 93183469 93183468 93183582 1046821 1046820 1046934 114 TTTGTTGCAATATAACTCATTACGGGAGGCTCGCAATCCTCCCACCTAAAATGAAAACGATTTTTTTCCCCTCCTTCCTCGATTTTTTTTCTTTTTTCTTTTTTTGGTGTCTCT ....:xx......xx....xx.xx:xx....:.:...::..::x.:.x------------:...:..:.::..:...:.:xx........:......:........:...x... 48M12I54M 67/102 65.7% 114/94230402 0.0% 12/102 11.8% 21169561 NA +3090 chr4 + 190214555 114353060 114353059 114353125 66 TTGTAATTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAT chr4 - 94230402 15963358 15963357 15963423 78266980 78266979 78267045 66 TTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAAT .....x..x...xx::.:xx.x......:.......:......:::....xx...........:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 98389702 91824853 +3777 chr4 + 190214555 114438463 114438462 114438563 101 TGGCGTCATCTCAGTTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTTTCGAGTAGCTGGGATTACAGGCACACACCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ....:....x.:------..:..:..:xx:x..:...........::x...x.xx.x...........:.........:.:....--.:::......::.. 12M6D67M2D14M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 96241349 93973206 +3212 chr4 + 190214555 114456695 114456694 114456764 70 CTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCGCCTGCCACCACT chr4 - 94230402 18197139 18197138 18197203 76033200 76033199 76033264 65 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCACT ..:.:.......x.:xx...x.xx.x.........:...........:......x.:.-----....... 58M5D7M 51/65 78.5% 65/94230402 0.0% 5/65 7.7% 96259556 93954999 +10437 chr4 + 190214555 114466273 114466272 114466585 313 AGAAATAAAAGTTAAA-TTGATGAAGCATGAAAAAAATG-TGCAGCACT------GTTTTGGGTTAATTCTATCTCTTTTTATTTTCTCTGCATATTGGACTCTGCTGTATT-------TATACTGCTCAGGCTATCAGTTTCCTAAAGCAGTTGAATAAGCCCCAGAGGACAAAGGTATCACTCTGAAGGGCG-TGAGCTTTGCAGTAGGAAAGCTGATGGTGTTCTATTCTGTTGACTCAGTATCTCCTCAGACCAGATGAGTGAGAGAAACAGC--CTGTCAGCAAATTT--------AGTGCTACTGCACACTCTCATGCCAAATCAAGCAGGTC chr4 - 94230402 36342989 36342988 36343319 57887084 57887083 57887414 331 AGAAATGAAAGAGAAAAGGGACGAAAGAAGAAACCAATGCTGCATCACCTGTATCACTTTATGTTAAATCTGT---TTTTTCTCTCTTCTGGA----GGGCTTTGATGCTTTGTACTCTTTTAATGCTCAGGCTATCA-TTTTCTAAAGCACTTGAATGAACACTGAAGGACAAAGGTATCATTCTGAAGGGCGCTGCTGTTTGCAGCGAGGTATCCCTGAGGTCTTCATTCCGTTGATTCAGTGTCTCTTCAGATCAGATGAATGACAGAAGGTGCGTCTGTCAGCAACTTTGCAACTTCATCTTTATTGCATACTCCCATGCCAATGCTAGCAGGTC ......:....xx...-xx..:...:x.x....xx....-....x...:------::...:x.....x...:.---.....x.:.::....x.----..:..:..x..:x..-------.x..x..............-...:........x......:.:.x.:::...............:...........-..xxx.......:::.:x.x.:xxx:.xx:.::....:.....:.....:....:.....:.......:...x....:xx..--..........x...--------.x:x:..:....:....:........xx.x........ 16M1I22M1I9M6I18M3D17M4D15M7I19M1D55M1I82M2I14M8I38M 225/305 73.8% 331/94230402 0.0% 34/305 11.1% 78123284 NA +10045 chr4 + 190214555 114468209 114468208 114468656 448 GCAATAAAATGTTTAGAAATCCACTTGCATTTGAG--------CACCTACAGTGTTCATATAATTTGGCTCTGTTGCTGATAGTTGTCTCTTCAGTTTAGGTATCTAGTTTAAGGATCAGAAGACAATTAACAATTAATAACAAGCTCAAATGGCTTCCCTCTTAT---TGTTTCTATGGTA---------------------TTAGCTGGTTGGTTCAGCTACTTTACATCAATACTGCTAAATCAAAACAAAGG--------TTAATAAA--CAAGAAGGAAAAGAA--CAAGGGTGTTTTTAAAAATCCA---CAGCAT---TTGGTTTTTTTCTTTGTTATATAATTATTTT----CAAGGTTACAGAAGTGAGCAATTGCCTTAAAAATATTCCA-GTTTCTTAAGTGATGTAAATGTCTCATGGATACAGTCCATTTCAATCATTGGAAAAGG-AAACTTTTACCCAGATGTATTGAAACTACAATAGAGAGAAACAT chr4 - 94230402 36344847 36344846 36345334 57885069 57885068 57885556 488 GCAATAAAAAATTCAGTATCCCCCTTATATTGTAGGACCTACACACCTACAGGATCCATATAATTTGCATCTGCTGCTGATAGTGGTCTTTTCAGTTTAGGTATCTAGTTTAAGGATCAGTAGACAATTAACAATTGATAACCAGCTCAAATAGCTCACTCGATATCTCTGTCTCTGAGGCACACTCCTGCACTGTCAGTGTCTCAGTTCACTCTCTCAGCTACTCTGAACAA-------TAAATCAAAACAGCAGCAGCTGTACTAACAACGTCAATAAGAAAAAACCTTCAGTGCTGCCTTAGAAGAAATAAATCAGCATTTATTGGCCTGATTTCTTTTAACATTGAAATCTTATAACATGTTCTTAGAAACAAATTA-----TTAAAAGTAGATAATGTTCCATAATGGTTGTGAATTACT----GCCTAAGTGGATTTTAATAATTGAAAAGGGAAAACTTTTATCATTGTGCACCAGAACATTGTCAGGAAAAAATGT .........x:..:..x.x:..x...::...xx..--------.........x:.:...........xx....:..........x....:..............................x...............:.....x.........:...:x.::xx...---...:...:x..:.---------------------.:..:.x::.xx:.........:.:x.:x.-------............:x:.--------:...:..x--...x...:....:xx--..:x.x..::..x:..:.xx:.---......---....::.xx..::..x.x.:..x:xx..:..----..x.x.:x:....:::.::x.-----......:..xx:x.-...:.x...xx.x...:...xx..----.x:xx...xx....:...x....:...:..-.........:.xxx:..:.::::...xx::x:..::.:...::. 35M8I123M3I13M21I30M7D16M8I8M2I15M2I22M3I6M3I31M4I21M5D14M1I24M4D30M1I44M 295/432 68.3% 488/94230402 0.0% 72/432 16.7% 78123362 NA +3123 chr4 + 190214555 114471774 114471773 114471854 81 TCTTGTATGTTTATTTATATTTTTACCATTGCTAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 70982593 70982592 70982673 23247730 23247729 23247810 81 TTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCAT .:.::...:.x.......x:x.x..x.x..x:.xx............:.......:::.:...x::.:x:........::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 43489181 NA +3139 chr4 + 190214555 114495349 114495348 114495414 66 TCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAATGATAC-GACTTCA chr4 - 94230402 78858529 78858528 78858595 15371808 15371807 15371874 67 TCAGATATTACAGAAAAATATAAAAGAAAGAAAGAAAAAGAAAGAATAATAAATAATACAGACATCA ...:.x.xx.x.:.....x.x................:.:......x..x....:....-...x... 59M1I7M 52/66 78.8% 67/94230402 0.0% 1/66 1.5% 35636820 NA +3213 chr4 + 190214555 114515317 114515316 114515369 53 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAGATATGCCTTTCTTAATTTATCAT chr4 - 94230402 28641595 28641594 28641647 65588756 65588755 65588808 53 ATCTGAAAAAAAAAAGAAAAAAAAAAAGAGGTAGGCACTCATTAATTTAACAT ....x..........:...........:..:..x..x:.:x........x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 85873722 NA +3906 chr4 + 190214555 114519266 114519265 114519333 68 ATCTCAAAAGCAAAAACAAAAACAAAACAAAACAAAAAAAATATTTCTACATATTCTAGTTTGGAAAA chr4 - 94230402 68874962 68874961 68875027 25355376 25355375 25355441 66 ATCTCACAAGCAAAAACAAGAACAAAACAAAAC-AAAAAAATAGTTCTACA-ATTTTACTTTCAGAAA ......x............:.............-.........x.......-...:..x...x::... 33M1D17M1D16M 58/66 87.9% 66/94230402 0.0% 2/66 3.0% 45644304 NA +3060 chr4 + 190214555 114520605 114520604 114520667 63 GTATATGTGTGTGTATATACACATATATGTGTGTATATGTGTGTATGTGTGTATATACACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ..:.::........:..:.......:....:::..x.:xx:.x:......:.::...:..... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 67425441 NA +3916 chr4 + 190214555 114520621 114520620 114520764 144 ATACACATATATGTGTGTATATGTGTGTATGTGTGTATATACACACACATGTGTGTATATGTGTGTATATACACACGTGTGTGTATGCGTGTATATACACACACATGTGTGTGTATATACACATATGTGTGTGTGTATACACAT chr4 - 94230402 25393253 25393252 25393376 68837027 68837026 68837150 124 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACG--------------------CACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCACAT ...x.x..:.:..::...:.....:.....x.....:..:.........:.--------------------.......x:x.::xx.x::x..xx.x.x::xx.x..:......:.:..x::..:.:...:...:......... 51M20D73M 82/124 66.1% 124/94230402 0.0% 20/124 16.1% 89127368 NA +3088 chr4 + 190214555 114520686 114520685 114520795 110 TATATACACACGTGTGTGTATGCGTGTATATACACACACATGTGTGTGTATATACACATATGTGTGTGTGTATACACATATATGTGTGTATGTGTGTGTATATATACACA chr4 - 94230402 89016083 89016082 89016192 5214211 5214210 5214320 110 TGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACA .:.::.....:x..::..:.::.:::::.x.:.:......::..::x:.::......:..x:........:.x....x.:::::::::::x:..:...:x:..:x:.... 110M 58/110 52.7% 110/94230402 0.0% 0/110 0.0% 25504603 NA +3370 chr4 + 190214555 114520959 114520958 114521058 100 CATATACACACATATACACACATATATGTGTCTATATACACACATATACACACATCTATGTGTCTATATACACATACACACATATATATGTGTATATGTA chr4 - 94230402 73121110 73121109 73121209 21109194 21109193 21109293 100 CATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .....x..:...:...:.....x.x:::..xx..:....::.:.x:.....:x:.x......xx..:...:.x....:.x..:.x.x.:::::..:.:.. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 41399849 NA +3043 chr4 + 190214555 114521147 114521146 114521206 60 TATATACACATATGTGTGTGTATATACACACACATATGTGTATATATGTCTATATACACA chr4 - 94230402 38535896 38535895 38535955 55694448 55694447 55694507 60 TATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA ..........::.:::..x.x...:...:.....:........:....:x..:.x:x... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 75985251 NA +3547 chr4 + 190214555 114521160 114521159 114521270 111 GTGTGTGTATATACACACACATATGTGTATATATGTCTATATACACACATATGTGTATATACACACATATGTGTATATATGTGTATATATACACACACACACACATATATA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACA--CGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .....::.::...:x..:...:..:.::.:.x.x.:x.:x:....:..:...:x...:.--.:x::.......x:..:..:.:x...:::x....x.x........:.... 59M2D50M 68/109 62.4% 109/94230402 0.0% 2/109 1.8% 41400059 NA +3407 chr4 + 190214555 114521197 114521196 114521280 84 TATATACACACATATGTGTATATACACACATATGT--GTATATATGTGTATATATACACACACACACACATATATACATCACATAT chr4 - 94230402 37363040 37363039 37363118 56867285 56867284 56867363 79 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-------ATATGTATAAAATAT .:.:....:..x.:.:.:..:..:....x....:.--..:...........:...x........-------....::..x.x.... 35M2I27M7D15M 59/77 76.6% 79/94230402 0.0% 9/77 11.7% 77158157 NA +3069 chr4 + 190214555 114532952 114532951 114533044 93 ATATGGCAATGGTCATGTATGTACATATATATATATATATACACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 36218481 36218480 36218572 58011831 58011830 58011922 92 ATACAGCTACAGTCATGCCTAGATGAAAATGCATACTAACAAGTAATATATACATATGTGTATGTGTATGTATGTAT-TACTTATACAGTTAT ...::..x.::......:x.:x.::x.x..::...:xx.:.x::.x......:........:.....:.....:...-..:x....:.xx... 77M1D15M 60/92 65.2% 92/94230402 0.0% 1/92 1.1% 78314471 NA +3271 chr4 + 190214555 114532972 114532971 114533071 100 GTACATATATATATATATATACACACTATATATATATGT-----------GTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATACTAA chr4 - 94230402 87985345 87985344 87985454 6244949 6244948 6245058 110 GTGTGTGTATATATATTTATACACACCCT-TACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTTGCTGA ..:::.:.........x.........:x.-..:.:.x.X-----------..:x.x::............x.:............::.:.x..:..:.x:x..:x.:..:. 29M1D9M11I61M 68/98 69.4% 110/94230402 0.0% 12/99 12.1% 26547627 NA +3145 chr4 + 190214555 114532973 114532972 114533056 84 TACATATATATATATATATACACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982598 70982597 70982681 23247722 23247721 23247805 84 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..:......x...x:..:..xx:x:.x.x:x.:.:.......:........:....:.x:...x..:.:.:.::...:.:.:.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 43550375 NA +3156 chr4 + 190214555 114532987 114532986 114533062 76 TATATACACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 35554947 35554946 35555022 58675381 58675380 58675456 76 TAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ..x:..:.x:...x......x..x.........:::....:x:.:.........::...:.x.x..:.:..x.x.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 78978040 NA +3102 chr4 + 190214555 114532989 114532988 114533049 61 TATACACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATA chr4 - 94230402 81378288 81378287 81378348 12852055 12852054 12852115 61 TATCCCCAATAAATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGATTTGTA ...x.x..x..x...............x.....:...:......:::.x..:.x..x.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 33154701 NA +3023 chr4 + 190214555 114532990 114532989 114533070 81 ATACACACTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATACTA chr4 - 94230402 10689335 10689334 10689415 83540988 83540987 83541068 81 ATACATACTAAATATATATGAATATGTATCTCAGTTTATATGCATATGTGCCTGCACACATAAAAAAATATGTATTTTCTA .....:....x.........x:.:...:.x.xx:.x.....::....:.::x.::.:.:...x.x.x....:...x.x... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 103843655 86370900 +3073 chr4 + 190214555 114532997 114532996 114533056 60 CTATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 19559285 19559284 19559343 74671060 74671059 74671118 59 CTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATAT ....x.x.x.x..............................:.xx..-..x.x.:..... 47M1D12M 49/59 83.1% 59/94230402 0.0% 1/59 1.7% 94973712 NA +3073 chr4 + 190214555 114533000 114532999 114533064 65 TATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 35554958 35554957 35555022 58675381 58675380 58675445 65 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ..x......x..x.........:.:....:x:.:.........::...:.x.x..:.:..x.x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 78978042 NA +14350 chr4 + 190214555 114535691 114535690 114536053 363 TATTGTTGTAGATAATCTTTTAGTCAGGTAATGAATAGCACATGGTACAGAAAAACATATACATATACATTTTCATTTCAGCTTTTCTGAAGCCCCATTGTTTATTTCAGGCTGCTTTACTGAGACTCCTTGCACTAAACGCCTCTGGTTGCATTCCACTCAAGACAAAGGCATATTTTAGGGATGTACCTCTGACAAAGAGGTATTTATGGACCAGGAATCAGACTTTGGACAAATGGGCATTTCATTAT-AACACAGCCTAATTGTTAAA---GCTCTTATTGAAAAGAATAAAAATTTCATTAGTCATCACAGGAACTCA-----GCACAAACTCCTCCTCCTTT---------TCCCCACAATGCACAGAAAGAATG chr4 - 94230402 36364486 36364485 36364861 57865542 57865541 57865917 376 TGTTGCTTTGACTCACGCTTTAATCAGGTAATGAATAGAGCATGGCACAGaaaaata-----ataataataataattGCAGTCTTTGCACTGTCTTATTGTTTGTTTAAGCCTGTCCAACTGAGACTCCTTGCACTATACGCCCCTGGTTGCATTCCGTTTGAAACAAAGGCATATTTCAGGGAAGTACCTCTCACAAAGACGTACTGATGAACCAGAAATCAGAGTCTGGACAAATGACCATTTTACTTTAAACACAGCTCTATTGTTCCACTTTTTCTTCTCCTTGGGAATAAATGTTTCATTATTTAAAATAGAGGCTGAAAAGCAAATGGACTCCTCCCCTTTCTATAAGTAATCTCCCCACTGCACTACAGAAATG .:...:.x.::x.x.:x:....:...............x:.....:.........:.-----...xxx..xx.x...x...::...x::xx.:.::.......:...x..x...:::x...................x.....:.............::.::.:..............:.....x........x.......x...:.x...:.....:.......x.:..........:x.....:.:.x.-........::x......xx.---x:....x.:xxx::.......x:........x.:.xx.:..:::..x.-----:x.:::........:.:..:---------..:..x..x.....x:x.::.... 57M5D189M1I20M3I48M5I20M9I24M 256/358 71.5% 376/94230402 0.0% 23/358 6.4% 78171205 NA +3085 chr4 + 190214555 114554484 114554483 114554605 122 GAATTTTCCATTGTTTACTTGTTGTACAACCTATGTAAATGAAGAGGATGAAGTAAAATTACAAAGTCATTTACTTGGTGTATGCCCTATGTAAATGAAGAAGGTATTTCCTGTCTTAGCTG chr4 - 94230402 93613998 93613997 93614116 616287 616286 616405 119 GAATTTT---TGTTTTAATTCCTCTAAAAAAAATGTAGAAGAAGAAGAAAGAAAGAAGATTTAAATCCTTTTACTTTGTGTTTTCCCTTTCAAAACAAAGAAAATATGTGCCGTCTGGTCTG .......---.xx....x..x:.x..x..xxx.....:.x.....:..x::.:x:..:x.x:...x:.x.......x....x.x....x.xx...::.....::...x.x.:....x:x... 7M3D112M 77/119 64.7% 119/94230402 0.0% 3/119 2.5% 20940486 NA +3038 chr4 + 190214555 114601800 114601799 114601843 44 AGAGACAGAAGTACCATTCTTCTTTTTATGTTTTTTTTTTTTTT chr4 - 94230402 71945303 71945302 71945346 22285057 22285056 22285100 44 AGAGACAGAAATACTATTTTTCTGTTGACATTTTTTTTTTTTTT ..........:...:...:....x..x.::.............. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 42656497 NA +3381 chr4 + 190214555 114611395 114611394 114611522 128 TATATATCCATATATATATATATATATATATATATATATATATATATATATACACACACACACAGAGATATTAGATATATATAATATCTATATTATAT--------ATTAGATATCTATATATAAGATAGCCGTAT chr4 - 94230402 8395793 8395792 8395922 85834481 85834480 85834610 130 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA---CAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTAT---TAATAAAGCTGTAT .:...:.x:::...x.:..:...x..:....:...::x..:..xx...:.:...............x.---:.:..:x...x..x.:.:.x.:..:..--------..x..:..xx...---...x.x...:.... 68M3D27M8I13M3D14M 83/122 68.0% 130/94230402 0.0% 14/122 11.5% 106215602 83998953 +57366 chr4 + 190214555 114622861 114622860 114623719 859 TTCTGGTTGTTATTACAGCTATGAAGTCTTACACTCCATATTTCATTCTCCTGTGGAGTGCTGTTGGGATAGCGAAGGCTGCCAAAATCATCATCGTGCCGCCAATTATGTTTGAAAGCCATATGTACATTTTCAAGACGCTAGCCTCAGCCTTGCACGAGAGAGGCCACCATACAGTGTTCCTCCTCTCTGAAGGCAGAGACATCGCCCCATCTAATCATTACAGCCTCCAGCGCTACCCAGGGATCTTTAACAGTACCACCTCAGATGCTTTCCTACAGTCCAAGATGCGGAATATTTTCTCTGGGAGATTGACAGCAATCGAACTGTTTGACATACTGGATCACTATACTAAGAACTGTGACCTGATGGTTGGCAACCATGCCCTGATCCAGGGTCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTAATGATATGTGTGGATTTGTGATAGCTCATCTTTTAGGGGTTAAATATGCTGTATTTTCAACTGGCCTTTGGTATCCTGCTGAAGTGGGTGCTCCTGCTCCATTAGCATACGTCCCAGAGTTTAACTCACTCCTCACAGACCGCATGAACTTGCTGCAAAGGATGAAAAATACCGGTGTTTACCTCATTTCCAGATTAGGGGTCAGCTTTCTGGTTCTTCCCAAATATGAAAGGATAATGCAGAAGTACAACCTGCTGCCAGAGAAGTCCATGTATGATTTGGTTCATGGGTCCAGCCTGTGGATGCTGTGTACTGACGTAGCACTGGAATTCCCAAGACCCACTCTGCCTAATGTTGTTTATGTAGGAGGAATCCTAACCAAACCAGCCAGCCCACTACCAGAAGTAAGGTTTGCCGAATT chr4 - 94230402 36393272 36393271 36394130 57836273 57836272 57837131 859 TCTTGTTTCTCATTTCAGCTATGAAGCCGTACACTTCAGTTTTCATCCTCCTGTGGAGCGCTGTTGGGATAGCGAGGGCTGCCAAAATTGTTGTTGTGCCGCCAATTATGTTTGAAAGCCATCTTTATATTTTCAAGACTCTGGCCTCAGCCTTGCATGACCAAGGTCACCAGACAGTGTTTCTCCTCTCTGAGGGCAGAGAGATTCCTCCATCTAATCACTATAGACTTAAGCGCTACCCAGGGATCTTTAACAGCAGCACATCGGATGACTTTCTCCAGTCCAAGATGAGGAGTATCTTCTCTGGGAGACTGACAGCCCTGGAACTGTTCGACATCCTGGACCACTATTCGAAGAACTGTGACATGATTGTTGGCAACCAAAACCTCATGCATGCTCTGAAACAGGAAAAATTTGACCTGCTCCTGGTAGATCCCAATGAGATGTGTGGATTTGTTATAGCTCACCTTTTAGGGGTTAAGTATGCCGTCTTTTCCACTGGCCTCTGGTACCCAGCAGAAGTGGGTGCTCCAGCTCCCCTCTCTTATGTTCCAGAATTTAACTCACTCCTTACAGATCGCATGAACCTATTTGAGAGGATGAAAAATACTTTTGTTTATGTTATTTCAAGATTTGGAGTCAGCTTTTTGGTTCTGCCAAAATATGAAAGGATAATGCAGAAACACAAGGTTCTGCCAGAACGATCTATGTATGACTTGGTTCACGGATCCAGCCTGTGGATGCTTTGTACTGATATAGCGCTGGAGTTTCCAAGACCAACGCTACCGAATGTTGTTTATGTGGGAGGAATCCTAACCAAACCGGCCAGCCCTCTGCCAGAAGTAAGGTTTGCTGAGCT .::..x..x.:...x...........:.x......:..xx......:...........:................:............::.::.:...........................x.x..:...........x..:..............:..xx:...:.....x........:...........:........x..:x.:...........:..:..x..:x.........................:.x...x..:....x:..:..x............x...:...:............:.......xx.x........:.....x.....:......x.x............x....x...........x:x...x..x..x.x......:x.:.................x.....:..:..:.....x..............x........:..............:.....:..x.....x........:.....:..x..x..............x.....x:.xx.x..:..:.....:..............:.....:.........:.::.xx.:..............:xx......:x.:.....x.....x..:.........:.......x..x.......................::....xx.x........:x::..:........:........:..:.................x........::....:.....:..:........x..x..:..x..............:....................:........x..:.................:..::. 859M 712/859 82.9% 859/94230402 0.0% 0/859 0.0% 78229589 NA +3093 chr4 + 190214555 114627848 114627847 114627888 41 TGTACTGTTTTTGTTGTTGTTTGTTTGTTTTACATGGCTCT chr4 - 94230402 79038062 79038061 79038102 15192301 15192300 15192341 41 TGTACTTTTTTTGTTGTTGTTTGTTTGTTTTCAGTGGCTCT ......x........................xx:....... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 35589786 NA +10610 chr4 + 190214555 114636245 114636244 114636485 241 CAGCTGAATAGGGAATAAGGCCTC--------AAAAGGTTTATATCCAGTATTTGAGTACTTTTGTTATTCTCTTTAAAAAGTCAGTATTAGGCACTACTGGTTACTACCAGCTGAAGCCTTAC---------ACAGCTGTGTATTTAGCATTTAATCATGCTAAGAATTGCTAATTAGAAAATCAAACCGGACAAAGCATACCCAGTGGAGTTGATACAATACCATTTCTGTTTGAGAACCATAAATAAATAATCTT chr4 - 94230402 36404046 36404045 36404298 57826105 57826104 57826357 253 CAGCTGAACAGGGAA---AGCTTCGATTATTAAACCGGGTTATGTTT-GTACTTGTGTACTTTGTTTAT-CTGAAGCAAAGCTCAGTATTAGGCACCACTGGTTACTGCCAGCTGGGTCCTCACTCTATAGTCACAGCTGTGCATTTAGCATCCAAGCCTGCTAAGAATAGCTAATTAGCAAACCAAACAGAACAAAGCTCACATAGTGGGGTCGGCACAATGGCATTCCTGTCTGAGAATGGTAAAAAGATTATTTT ........:......---:..:..--------..xx..x....:.::-...:...x.......xx....-..xxxxx...:x..............:..........:.......::x...:..---------.........:.........::..x.x..........x.........x...:.....x.:.......x:..x:.....:..:.::.....:x....:....:......:x:....x.:..x..:.. 15M3D6M8I15M1D21M1D54M9I125M 181/236 76.7% 253/94230402 0.0% 22/236 9.3% 78232199 NA +10169 chr4 + 190214555 114663904 114663903 114664142 239 TAAAAGGTTTTTTTTTAACTGGGCTGTTAATAACACCAATTATAAACTACATTGGTCTTCGTAAAACTTACTGCCATGTTTTGATTTACAGGATCTCCAAAGATGGGTAAATGGTGCTAATGAACATGGCTTTGTCTTGGTGTCTTTTGGAGCTGGTGTCAAGTATCTGTCAGAAGACATTGCTAACAAACTGGCAGGAGCTCTGGGGAGATTGCCTCAAAAAGTGATTTGGAGGTAAG chr4 - 94230402 36411263 36411262 36411484 57818919 57818918 57819140 222 TAAGCAGTGCTTATTTAATGTGTCTGTTGATTACCTGTGTTTCTAA-----GTGTTCGACATAAACTTTACT------------TCAACAGGATCTCCAAACATGGGTGAACGGTGCTAATGAAAATGGCTTTGTCCTCGTGTCGTTTGGAGCTGGAGTGAAATATCTGTCAGAAGACGTTGCAAACAAGTTAGCACGTGCTCTGGCAAGACTGCCGCAGCGAGTTATTTGGAGGTAAG ...:x:..x:..x.....:xx.x.....:..x..x:xx:..x:x..-----x..x..xx.:....x:.....------------.:x..............x......:..:............x...........:.x.....x...........x..x..:...............:....x.....::.:...x.x.......x:...:....x..:x:...x............. 46M5D21M12D155M 168/222 75.7% 222/94230402 0.0% 17/222 7.7% 78252641 NA +6645 chr4 + 190214555 114665672 114665671 114665762 91 CATTTTAGGTTTTCTGGACCCAAACCAAAGAATCTAGGAAACAACACTAAACTCATAGAATGGTTACCACAAAATGACCTGCTTGGTAAGT chr4 - 94230402 36413802 36413801 36413892 57816511 57816510 57816601 91 CACTTTAGGTTTTCAGGAAACAAACCAAGGAATCTAGGAAACAATACAAAGCTTATAGAATGGTTACCACAAAACGACCTTCTTGGTGAGT ..:...........x...xx........:...............:..x..:..:....................:.....x......:... 91M 79/91 86.8% 91/94230402 0.0% 0/91 0.0% 78251870 NA +14669 chr4 + 190214555 114668053 114668052 114668310 258 TGTAAGTTGTTTTCTTT-----TTCATCTTTCTT-------CAGGGCATTCAAAGATTAAAGCCTTCCTGAGCCATGGTGGTTTGAACAGTATTTTTGAAACTATATATCATGGTGTGCCTGTAGTGGGAATTCCACTCTTTGGAGACCATTATGATACTATGACCAGAGTACAGGCAAAAGGCATGGGGATATTGCTAGAATGGAAGACAGTTACTGAAAAAGAGCTCTATGAAGCACTAGTGAAGGTTATCAATAATCCCAGGTAAGG chr4 - 94230402 36415921 36415920 36416190 57814213 57814212 57814482 270 TGTAATTTTTTTTGTGTGTGTGTTCATACCTCTTATATTTCCAGGTCACCCTAACATAAAAGCTTTTCTTAGTCATGGTGGTTTGAACAGCATTTTTGAAACCATGTACCATGGGGTCCCAGTGGTGGGAATTCCCCTTTTCGGAGACCATTACGATACTATGACCCGAGTGCAGGCCAAAGGCATGGGAATATTGTTGAACTGGAAGACTGTCACTGAGAGTGAATTGTATGAAGCACTAGAAAAAGTTATTAATGATCCAAGGTATGG .....x..x....x.x.-----.....x::....-------....x..::.x..x..x.....:..:..x..:.................:...........:..:..:.....x..x..x..:...........x..:..:...........:............x....:.....x...........:......:.::.x........x..:.....:.:x..::.x.............x:..:.....:...:....x.....x.. 17M5I12M7I229M 206/258 79.8% 270/94230402 0.0% 12/258 4.7% 78252132 NA +3270 chr4 + 190214555 114669379 114669378 114669431 53 TACATATATATATATATATATATATATATGCACACATACATATACATCATGCA chr4 - 94230402 10572843 10572842 10572895 83657508 83657507 83657560 53 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACATCATACA ..x.........x.x.x...................:.x.:.x.......:.. 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 104096536 86118019 +3307 chr4 + 190214555 114669385 114669384 114669477 93 TATATATATATATATATATATATGCACACATACATATACATCATGCATGTATCATATATGTGTGTGTATGTATGTATCTATCTTCAATCTTTC chr4 - 94230402 65311257 65311256 65311349 28919054 28919053 28919146 93 TGTGTATGCATATATTTATATATACACACATATATATGGACTGTGCAAAAACAGTGTATGCGTGCTTTTCCCTTTTTATGTTTTCCATCTGTC .:.:...::......x.......:........:....:x.:::....x:x.:x:.:....:...:x.x.x:x.x.x.x.:.:...x....x.. 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 49358128 NA +57440 chr4 + 190214555 114675896 114675895 114678376 2481 TCATTCTGTGTTTT--GTCCCCTCTCCATAGCTACCGTCAGAGGGCTCAGAAGCTTTCGGAAATTCACAAGGATCAACCTGGTCACCCTGTCAATCGAACTATCTATTGGATAGATTATATTATTCGTCACAATGGAGCCCATCACCTACGTGCCGCTGTCCATCAGATCTCCTTTTGTCAGTATTTTTTACTGGATATTGCCTTTGTGCTTTTGCTTGGTGCTGCCTTGTTATACTTTCTCTTGTCTTGGGTGACAAAATTTATCTACAGAAAAATCAAAAGTCTGTGGTCTAGAAATAAGCATAGCACAGTTAATGGACATTACCACAATGGAATCCTCAATGGCAAGTACAAAAGAAATGGCCATATTAAACATGAAAAGAAAGTGAAATGAGCCAACAGCCCAGGTGATAGAAATAAATTGGTTCACTCATTGAATTTTTATTGCTATTATTTAGTCTAACAGCTACTAAAAGTAAAACATCAGTAAACAATTCTAACATGCCCTTATGAGATCTACTAAT-------GAAATTCTGTGGAATTAAG----ATGGCTGTAAA-----------------------AAGCACAAACCTAAAATGCAGAAATGTATTTTATTC-AAATACTGATGTAGAGAG----TTTTGGCACTGAACCTTTTAGAAGCCTTAATTATTTAAATCAATTCAGTGACTGTGTCAGACCTTAGTTTTAAATCTT------GATATGTGCGTGTCCCGGATCAGGAATGGTTTCATTTTTCTTAATAATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTC-CTAATTAAGAGAATTT-TTACTGGCTGCTTGTTACATTTGTTGAGGGTACAACACACTCAAGAATAAAGT----AAAAGGATAGTCAGGA--TCCAGATGTTTCTTTTCTAGCATTTAATGTG----TGTGAACTCAGAACACTACCATGAAAGAACACTTCCCCCCAAAACTGGATGCAGAGGAAGAAAAAAAAAAAAGAAATGGCACAGTTTTTTGTATTTTTTTTTTTAGTTATTTTTTGTTGTTGTTGTTTGTATTGTTTTTCTTTTCTGATAGAGTATGGCCACTTCTGGGGGAAAAACATGTAATTAAGTAAATGTATACATTGGTTTTCACGTTTTACTT--------TTGT----------TTTCCCACTACCAATAATTTTCCTCTGGAAGAATTTTATAGTTTTTTCTATTTCATTTTAA-------TGAGTAACAA-TATGTTAAATGCATAAT---------TAAGACAAAGCAATGAAAT-TCTGACTTTATTCAAAGTACTGAAGATT-----ATTGCTTCTAGGGCATTTTTAAACAGCACCATTGT-----ATT---------------------------GTTGAATGT------------------TTATGTAACTGATGGCTTTTCTATAATGTAATTTTTG---------AATGTT-CAGGTGTTACATTTCCAAAGTTTAACTTTTAAAAAACCATCTTCTGATCCCTTTTATT-GTCTGGGCCATACAATCTATATT--ACATAGGTGCCAACATTTAATTCTTTTAA----ATGGAACATTTGCAGTTTTCCATATT----GGTACCTGCTTTTTCTGGAGAGGTTTGAGATCTTGTTAACAAATCAGACTTTACACTATATACAGATGTGACAG-ATAAATTGAACCACTTGTTTGTGAAAATGAG-TTCCTGTCATCTTCCTCATTCACTCAGCCCTCACCCCAGCAGCCTTTTCCGGTCATTGTAGCTGACATGGA------GCAGTG--ACAGTATTCATTTGAGAACAGGGATGCAAGTCACAGACATCATAAAATCAGGGTCTCCCTGCTGAAGCATTCACTAGTTGGCAACTATGAATTTA-TTCCATGTCATTCTGTTTACTTAGCACTTGCACTACCCTTGTTGGTTGAGTGTATGCTTTATTTGTTTCTAGTTTGAAATCCCACATCTGATAGCTGAGAGTAGGCAAATACAACATTTACCTAATGTCATTCACTAACAT-GGAAGAGTTGTGAAAATTCTAGAGTGCTGTAAATCCTTGGCATACACTATGACAAACAACTTCATTACTCTCCCACCAGGAGCTGCTCTCCTGCACTTAGAAATAATGTCACAAGTAGTTTTCTAATGTACAATGCAGACAAATGTACTGCTCTCTGAATACTTGAAG-AAATGGTATTATACATACATAGAAACTTATTAGTTATACCTTTTCACAATCTTATTACGATGTTGCCGTTAAAAGGGAAAAAAGACACAGGCAATGAATGGTGGGATAGTAAGAGGACTTAGAGTGTATGAATGAGTTGATTTTACTTTTTTGGAATTTGATTAAGTTGACAGT----AGGCACTGATTGGATGATTAAACATAAGTTAATCTCCACTGTGATAAAAACTTAAATAATAAACATGATTTAAAATAGAGAAG---TGTTGTTGGAATAAAATTTTTATTCA----GATTTTATTTCATAATAT------------TATATATATTCATTTTAAACATGTTTCTAAGACAGGTCTCCCAACTTT--TGTATGTATTTATGAGTGTGGAAACACGTGTTAAATGTGAGACTTTTTTTTTTAT chr4 - 94230402 36417785 36417784 36420284 57810119 57810118 57812618 2500 TTATTCCGTTTTCTTCGTCTCTTTCATACAGCTACAGGCAACGGGCTCAGAGGCTGTCTGAAATTCACAAAGACCAACCTGGTCATCCTGTTAACCGGACTGTGTACTGGATTAACTACATCCTCCGTCACAACGGAGCGCAACATCTACGTGCCGCTGTTTACAGCATCTCTCTATATCAGTATTTCTTACTGGATATTGCCTTTGTTGTATTAGTGGGTGCTGCCTTATTTTATTATAGTTTGGCCAAGCTAACAAAATTTATCCGCAAACAAGGCAAACATATTTGGTCAAATGATGAACATAGCACTGTTAATGGACATTACCAGAACGGGATACCAAATGGCAAGCATAGAAGAAATGGCCACATTAAGCATGAATAAAAGGTGAAATGAGCCAACCCCTCATGT-----AAAGTAATTG-------------AGTTTTATCGCTGTAACTTAGTCTAACAACTACT-----TAAAACATCAATAAGCAGTTCTAACACTCCCCTTCAGTATGTAATAATATGTGACAAAATTCTATGGAACTAAGGAACATATTTaaaaaaaaaaaaagaaaaaaaaaCAACCAAGCAC-AACCTAAAATGGAAA----TATTTTATTCTTAATACTGATGCAGAAAGGTTATTTTGGCACTGAAGTTTTTAGAAGCCTTAATCCTCTAAAGTTATATGATGACCATATT---TATGAATTTTCAGTTTTTTAAAAGCTAAATGTGTGTCCCAAATGAGGAAAGGTCTC-TTTTTATTTGCAGAGT-------------------TTTTTTTCCttttatttttttattattatatCCATCTTTAGCTGAGAGAACTTAGTGCTAGCTCTGTGTTTCATATGTTGAAGGCTCAATATGTATAAGAATGCTGTTTAAAAAAAAAAAACCAATAATTCCCGATGCTTGT------GCAAGAAATAGGAAGTTGCAAACTGAGAACACAGACattaaaaaaaaaaaaattcttaaaataaGCACTGAAGAAAAATGGCAAAAA----------------TGTATACTATGTTTTCTGGTAA----------------GCTGCATGACTCTTCTGCTC---------ACTACCAGTGCTTTAGAGAAAAGA-GTAG-TGAGCAAGTCTACA-ATAAGTCTTAATTTTTAATTTATACAAAATTGTATTTGTTGCCTTTCTCTACATGTGTAATTTATGCCATGAA-AATGTTAGGG--AATTCTATTTCAGTTTAAATACGGCTGTGTGGGAAGTAGATT---TGCATAATTGAAATAAATGAAACAAAACAAAAAAATATCCACCCCTGTGCTTAATGCAGAAGGTTTTGTGATGGC--CCAAAGCAGTGCAGAATCGAACTGTTATTTGGGATTTAAGAAACAAACAAGAAAATGCTAAAAGATGAATGTCCTTCCTATTAATTCGCATTATTTTTCTGttgttttttttgttttgttttgttttCTAATTCACAATGTTGTAGATGTTCTCTTTCAATGGTTGTA--TCTGAGAAACTAT-------TACCTTCTCTTAGTCTGGGCCGCGCAATCCGTATTTCCCATAGTTGCCAATGT----CCCTTCTGAGACCATGGGGCA---GGAGGCTGCC-TGCTGGGAGGCACCAACCTCC--------GGTTTAAGACTCAGTGGG------AGGCACGACACAGAGCGCAGCCGGGCCGGTGCAAAGTG----------TGGGGCAGCTGTGCCTCCTGTCCCCAGCTCCG-------GACCCTCCCTGCAACAATCTCTTTCAATCACTGCAGCTGACATGGGAACCCTGTGGTGGTGCAGTACAAACCC-AGGGCAGGGAGGCAGGGCACCTA-GCGGCGAAATCAGCATGGCCCTGCCAAACCG-----GAGTTGGCAACTATGCATTTATTTCCATGTCATTCTGTTTACTTGGAATTTGCACTACACACGTTG--TGAGTGTATGCTTTATTTATTTGTAGTTTGAATTCCCATGCCTGGAAGAGGAAAGAAGG-AAACCCA--TTTTACTTAGTGTTGTTCACTAACATGGGAAGAGTTGTGACGATAACAGAGTGCTG-AGATCATCCTCATACACAGTGATGCAATATTTCATTACCATTCCATCAGGAGCCTCTATCCTATAGCAATAAATAACAGTACAGATATCTTTCTAATACGCGGTACAGTTACTTGTACTGCATTCTGAATACTTGAAGAAAATGGTGTTATAAAT------AAGCCTATTAGCTATACCTTTTTACAATCTTAC--AGTTTGTGTCAACTAAAGGAACACAAGG---AGGCGATGAATGGTGGGATGGTAGTAAGACTTCGAGTGTATGAATGACTTGGTTTAAATGTTTTTT--TTTTTTTGCATTGAAGGTACAAAAGCACTGACCGGATGATTAAGCGTAATTTAATCTCCACTGTGAT-AAAACTTAAGCAATAAACATGAATT-TAATAGAGAAAATCTGTTGTTGGAAGCATATTTTTATTCACATGGATGCTATTTTGAAGTACCCAGTGCGTGTGTGTGTGTGTTTATGTGAATGACTATGGAGATACAGATTTCTTGTTTTCAGTATATGCAGTGATGCATG-----ACATATATTTGAAGTCAAACATTATTATCTGT .:....:..x..:.--...:.:.::x:.:......x.x..:x.........:...x..x...........:..:...........:.....:..:..:...:.x..:.....x:.:..:..:x.:........:.....x..x..:..............::.:x:x.....::.x.:.........:....................xx.x..:x.x...........:..x..:.x.xx:...x.:x:.x.:............::..:.x..:x....x:.x.x.....x.:x:..:.:........x.................x..:..:..x.:x.........:.:.:............:.....:......x.:..:...............xx.:..x..-----...xx.....-------------.x......:...:.x.:...........:.....-----..........:...:..:........:x...:.x:::x..x..x....-------:.......:.....:....----..:x:.:x...-----------------------......-...........x.:.----..........-x..........:...:..----.............x:................:x.:....x:x..x:::....::.:.:---:x.x.:....x.:.:..------.x..x:..:.......::..x.....x...:..-.....x..x::.:x..-------------------.x.x.x.x:x.x.:...x.x.:.xxx.:.:.x::..-:..::.:......:..-x.:..:...x:x....x...x......:..:x...:.:::x:......:xx..----....::.x.::..:x.--...x....:..x.------...xxx...:x.----..::....x.......x:x...x...:..x.xxxxx::.:x...x.:::::.x..:...:..x::x.....----------------.x.:..:.x.x....:.:..x.----------------x:..:..x::.:....x:..---------.:x:...x.x..xx:.::....x.-...:-.:..:..:.x..:.-..x:..:..x.:x...x.:..--------....----------....:.xx:.:xx:......x:x:.xx...-...x...x:.--xx..........x.....-------..x..::x..-..x:..---........---------.:.:.....:...x:....-..::x.::.:.x.xx.:.:.x....:..-----..x..--.:.::...x.x:x:..:x.x..::..:.-----...---------------------------.x.......------------------....x.xx...x..x:....:.:.xx...xx.x...x---------......-:..:....x:x....x.x:...xx.--.:.:.:....:..-------.x....:.x..-.........:::.....::....--x.....x......::.----::...:.:.----....::..---.x..x:.x..-.::.----..:...x:.:.::--------.....:...:::x..x::------..:.x:x....x:x:::...x:.x.x.:.-::...x..----------.x.x.x.:x..x.-:.......x:.xx.::.:-------::.....x.:x..:..::..:..:.::...:..:...........:------.::...--:.....:xx.:::-..::......x...:.x...xx.-::x:::.......x:.xx......::..x.:-----x..............x.....-......................:.x.:.........x.x:....--..................:...x.........x.....:::...:x..xx..:..x...-...:x..--x.....:..:...::...........-.............x:..xx:.........-.:...x.:xx.......x:...::x.xx.:........:x.:...:.......:x..x....::.x:x.x......::x:...::..x:........:::.::.:...x:.xx........x:...............-.......:.....x..------..:.:......:..........:.........:--x.x.xx..:.:x:x.....:.x.x...:---....:..............:...:x.:.....x..............x...:...x.x.x....xx--...xx..:x:....x:..----.:.......::..........:.:...x.................-.........::...........x..-x.........:---...........xx.x...........----...x:.....::x.:..:------------.:.:.:.:..:..x.x..xx.:xx.xxx:.x....:.:..:::x:..:--.:....:.x.x...x:..-----...::.:..x:.x..x.:..x..x..x.:.:. 14M2I394M5D10M13D34M5D48M7I19M4I11M23I6M1D15M4D10M1I18M4I58M3D17M6I33M1D16M19D36M1I16M1I53M4I16M2I13M6D12M4I71M16D22M16D20M9D24M1D4M1D14M1D21M8I4M10I30M1D10M2D18M7I10M1I6M3D8M9I19M1I28M5I5M2D28M5I3M27I9M18I37M9I6M1I25M2D13M7D11M1I23M2I16M4D9M4I8M3D10M1D4M4I13M8D18M6D29M1I8M10D13M1I18M7D46M6I6M2I13M1D23M1D31M5D21M1I44M2D59M1D7M2D26M1I29M1D138M1I16M6D33M2D28M3D66M2D18M4I45M1D25M1D11M3I26M4I18M12I48M2I18M5D32M 1598/2291 69.8% 2500/94230402 0.0% 399/2291 17.4% 78258111 NA +3324 chr4 + 190214555 114676861 114676860 114676974 114 GAAAAAAAAAAAAGAAATGGCACAGTTT--TTTGTATTTTTTTTTTTAGTTATTTTTTGTTGTTGTTGTTTGTATTGTTTTTCTTTTCTGATAGAGTATGGCCACTTCTGGGGGAA chr4 - 94230402 70540985 70540984 70541091 23689312 23689311 23689418 107 GAAATGAAAAAATAAAAACACA-AGTTTCATTTTGAATCTGTTTGTTGGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTTTTTCTTATC---TAGAGTGAG-----CTGTGGGGGAA ....x:......x:...xx:..-.....--...xx.x.:.x...x..:...:..................xx.x:.x........x..---......:x.-----:.x........ 22M1D5M2I58M3D9M5D11M 80/105 76.2% 107/94230402 0.0% 11/105 10.5% 44135876 NA +3192 chr4 + 190214555 114698679 114698678 114698776 98 CTGACCTCTTGTAAGCAGTTTTGAAGGTTATTCAAAGTGGTAGTGACATTTTCAAGTCGTTTTTCAAATGCATTCATTTTTGAACCAGCGGGACTTTG chr4 - 94230402 36433107 36433106 36433204 57797199 57797198 57797296 98 CTTACCTCCTCAGGGTGGTTTTGAAGCTTGTTCAAAGCACTGTTGGCATTGTTGAATTGCTTTTCTGTGACGTTCATCTCCAATCCTAAAGGATTCTG ..x.....:.xx::.::.........x..:.......::x.:x..:....x.::.:.:.:.....x:xx:.:.....:.:::.x..x:x:...:.:.. 98M 59/98 60.2% 98/94230402 0.0% 0/98 0.0% 78265572 NA +3559 chr4 + 190214555 114703227 114703226 114703297 71 TCTGTATTTCTATACATATACATATTTCTATACATATACAAATACATGTACATATACATATACACACAAAA chr4 - 94230402 53842119 53842118 53842189 40388214 40388213 40388284 71 TTTTTATAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACAAAA .:.x...xx:..:...xx....:....x...:..:...::x.........x...x...:............ 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 60861108 NA +3256 chr4 + 190214555 114721895 114721894 114721954 60 TTACTGTTTTCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTTTT--TCTTTCTTTCTTT chr4 - 94230402 15963374 15963373 15963435 78266968 78266967 78267029 62 TTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ...x.::.....:.....:..........:....xx....:......--.....x...::.. 47M2I13M 48/60 80.0% 62/94230402 0.0% 2/60 3.3% 98758521 91456034 +3042 chr4 + 190214555 114721904 114721903 114721979 76 TCTTTCTTTTTCTCTTTTCCTTTTTTCTTTTCTTTTTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT .:...:......:x.....::.x.xx.xx...::..x:x:.:.:.::.:..............::.:......x.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 58570354 NA +3058 chr4 + 190214555 114721955 114721954 114722019 65 TTTCTTTCTTTCTTTCTTTCTTTCTTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTTTT chr4 - 94230402 17388732 17388731 17388796 76841607 76841606 76841671 65 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTCTCT .::.....xx...:...:.......:.:......:..:.......x::...:.:x.x.x..:.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 97333223 92881332 +3060 chr4 + 190214555 114724886 114724885 114724936 51 TTCTTCTACTAAAAACAAAACACTAAAAAAAATTTCCAGTTTAGATTAATT chr4 - 94230402 4836562 4836561 4836612 89393791 89393790 89393841 51 TTCTTCCATTAAAAACAAGACACCAAAACAATTTTCCAGGTAAAATTACTT ......:.:.........:....:....x..x.......x.x.:....x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 109888324 80326231 +3051 chr4 + 190214555 114733670 114733669 114733751 82 CACATATATATATACACACACACACACACACACACATGTATATATATATATATATA--TATTAATATCTCTTTCCTGCACGAAA chr4 - 94230402 66904846 66904845 66904929 27325474 27325473 27325557 84 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAA ..:....:..::..........:...........:..x..x:.x:.x:.:....:.--:..xx::..:..:.::.x..x.x... 56M2I26M 55/82 67.1% 84/94230402 0.0% 2/82 2.4% 47828824 NA +3387 chr4 + 190214555 114733672 114733671 114733743 72 CATATATATATACACACACACACACACACACACATGTATATATATATATATATATATTAATATCTCTTTCCT chr4 - 94230402 66904846 66904845 66904917 27325486 27325485 27325557 72 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCT .......:..:::.........:............:.x..x:.x:.x:.:....:.x.x...:x:x...... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 47828826 NA +3207 chr4 + 190214555 114733676 114733675 114733729 54 TATATATACACACACACACACACACACACATGTATATATATATATATATATATT chr4 - 94230402 87372741 87372740 87372794 6857609 6857608 6857662 54 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATT ...x.x:.x...........x..........x....::...:..::........ 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 27360935 NA +3262 chr4 + 190214555 114733859 114733858 114733949 91 TTACCATATATATAATATATACCATATATTTTATATATACATATATATACACACACACATATATATA----TATATATATATATATAAAATATTA chr4 - 94230402 72916823 72916822 72916915 21313488 21313487 21313580 93 TTGCTGTATGTATCATACATACC--ACATTTTGTGTATATATATCCAGTCATGTACACATATATATACTGCTGTGTATGCTTGTATATTGTATCA ..:.::...:...x...:.....--.:.....:.:....:....x:.xx..:::.............----.:.:...::x.:....xx:...:. 23M2D42M4I24M 62/89 69.7% 93/94230402 0.0% 6/89 6.7% 41817036 NA +9688 chr4 + 190214555 114752584 114752583 114752862 279 GAAGAATTGTGAAGGATGTGACACTAATCATCCA----GGGAACTGGGGAAAAAAAGAATCGTAGTATTCTTTGCTGCTCAGGGCCATTTTTGCTCACCATGTCTTAAATTACATCCATTCTATGATTT-ACAGGCATCTCGGTTTCATCTAGAGAGCTATCTGGATCAAAACAGTAATATAGCCGTGTTGACAAATGCCACAAAGCCGACTTTCTTCTCAGGGGCCAACTTGAATTTCTGCTTAGTCGCAAGCAGACCACAAATGAACATGATTAAAATCTCA chr4 - 94230402 36443670 36443669 36443943 57786460 57786459 57786733 274 GGGGAACTGCAAGGGATGTGAAACTCATAACTCACAGAGGAAAGGAAGAAAAAAAGGAGCAGTAGAGTTCTTTGCT---CACGGCAATTTT-GTTGACCACTTATTAAGTTACATCCATTGTATGATTTGAAAGGATTCCTCCTTTTATCTGGACAGCCATCAGGATCGAAACAGTAATAAAACTCTGCTGACAAGTGACACAAAGGTGACTTTGTTTCCACAGCCTCTCTTAAATTTTGGCTT------GAGCAGAGAACAATTAAACCCCATGAGGTTCCCA .::...:..::.:........x...x..x.::..----..:..xx::.:......:..::x....x:.........---..x...x.....-.:.x....:x.x....:...........x........-.x...xx..::xx...:....:..x...:...x.....:...........x.:.:x..:......:..x.......x:......x..::..x:.x.:xx...:.....:x....------:......xx....x.:...x:x..x.::x..:.. 34M4I38M3D12M1D37M1I114M6D34M 190/269 70.6% 274/94230402 0.0% 15/269 5.6% 78308914 NA +3059 chr4 + 190214555 114769808 114769807 114769859 52 AGTTATATATAATATGTATGTGTATATATATGTATATATATGTGTGTATGTA chr4 - 94230402 85036770 85036769 85036821 9193582 9193581 9193633 52 AGGTTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTAAGCA ..x.x.....x......:.....:.......:........x..x....x.:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 29733038 NA +3311 chr4 + 190214555 114769859 114769858 114769947 89 ATGTATATATATGTGTATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGA chr4 - 94230402 81401293 81401292 81401381 12829022 12829021 12829110 89 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGA ..:.x.x.:.:.x...:.x..x:x:......:..:x.x...:..:..x.............x..:.x:....:x..:x.x.:....:.. 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 33368566 NA +4488 chr4 + 190214555 114769859 114769858 114769957 99 ATGTATATATATGTGTATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGAC-----CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..:..:.:.:...:.:.:.x.:-----:.....x:...:.x..x.x:....:......:....:.:.......:.:.............x.....x... 22M5D72M 69/94 73.4% 94/94230402 0.0% 5/94 5.3% 81371079 NA +4386 chr4 + 190214555 114769869 114769868 114769959 91 ATGTGTATATATGTGTATA---TATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..:.::.:.:...:.:.:.---:....:x:.....x..x.x.....:....:.:....:.:.......:.x.............x.....x... 19M3I72M 67/91 73.6% 94/94230402 0.0% 3/91 3.3% 81371089 NA +3005 chr4 + 190214555 114769870 114769869 114769933 64 TGTGTATATATGTGTATATATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x........:...::::x......xx....:.:...:...:...x:.:.:.:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 77406830 NA +3564 chr4 + 190214555 114769872 114769871 114769961 90 TGTATATATGTGTATATA---TATGTGTGTATATATATGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398781 33398780 33398873 60831530 60831529 60831622 93 TATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:..:.:.::..:::.:.---:..:.:x:.:...x..x:x.....:..:.:.:....:.:.......x.x.............x.....x... 18M3I72M 61/90 67.8% 93/94230402 0.0% 3/90 3.3% 81371091 NA +4056 chr4 + 190214555 114769886 114769885 114769955 70 TATATATGTGTGTATATATATGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398804 33398803 33398873 60831530 60831529 60831599 70 TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ....x....:.x..x.x:.:..:...........:.:.......:.:.x...........x.....x... 70M 55/70 78.6% 70/94230402 0.0% 0/70 0.0% 81371082 NA +3254 chr4 + 190214555 114779368 114779367 114779440 73 GGATAGCTTTGCTGGATTTTGCATTCTTGGATGACAGGTTTTTTTTTCTTTCTTTTTCTTTTTTTTTTTTTCC chr4 - 94230402 49339936 49339935 49340008 44890395 44890394 44890467 73 GGATTGCACTATTTGGTTTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCC ....x..x:.::.x.:...x.....::.xxx...::x:...:.::....:...:.:................. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 65439432 NA +3013 chr4 + 190214555 114821166 114821165 114821226 61 AAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAGAAAGAAAAGACTAGTCTGGTATACAAGA chr4 - 94230402 91846559 91846558 91846619 2383784 2383783 2383844 61 AAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGTCAAGTAAACTAAA ..:::...:..........:....x..........:...x.::x:....x:...x..x.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 22974607 NA +13037 chr4 + 190214555 114827509 114827508 114827953 445 ATCAGTCGTACATAGAGTATCTGAAACCTTATGCTTAACATAGGAACTGGGCTGTGCTATGATCTATACACTAG--AAACTGGATAATGCCACAAACCCCCACATAATCTCCCAAAAGCTTACACAG-GGATTGGTGCTAGTAATTGTCAATGCGTGCATATATAACA-------------------------------------GTTTTCATTTTATGAAAAAGGCTGAAGGAAATTTATTCACACAGTTCTTTGTTGACAATCACAAGTGCTTGAGAATAAAGGTGGATTTATTTTTTTTTTAACACTAAAAGTATCTTGAGAGGCTTAGTTCTTGTCTCCAG--------TGCTATCTCACTTTCTGCAGTTCCTGTCTCAGCCACGATGGCAGAGGCTGTCCCAGTCTGTGTAGCAGTTTGGATAGTTCCACATTATGATCTCGGTAGTAATTAGAGAGGAACGTTCTAGACTGGAAAGAAAAAAAGAA chr4 - 94230402 36471541 36471540 36472007 57758396 57758395 57758862 467 ATCTGTCCTACACACAGCTTCTGGTACTTTCTGGTGAACAGAAGGACTAGACTATGC-ACGAATCCTGTTCTGGGTAAAAAGAGTAATGCCACGTAGCTCCATAGTATTTCCTGGAAGCTGACAAAAAGGGTTGATGCTAATAACTGTCAGCGCGTGCATATA-AACACTTGTTGGGttttttttattcttttctattgttttttttttttttttttttAAA------GAAAGAGCATAATTCACAAGGTCCTCTACTGACGATCACAGGTGAGTCGGAGAAGCAGGGG------------TTTCACGGTGAAGGAAAT----GATCCTTGG--CTGGTCCCCTGCCCATGTGTGCTACCTGACCTTCTGCAGCTCCTGTCTCAGCCAGGAGGGCAGGGGCTGACCCAGTCTGTGCAGCAGCTTAGACAGCTCCACGTTGTGCTCTCGGTAGTAGCTCGACAGGAAATCTCGGGACTGTGAGGGAGGAAACAA ...x...x....:.x..:x....:x..:..x..x.x....x.:.:...:.:..:...-.:..x::x.::x..:.--...xx.::.........:x.x.:...:.xx..:...:::.....x...x.:-..:...:.....:...:.....::...........-....-------------------------------------x....:x....x.x...------...:..:xx.x.......x:..:..:.::....:......:...xx.x:..:x.:x:.x..------------...x..:x.:..:.x.x:----..xx...:.--..x...:..x.--------.....:..x..:........:..............x..x.....:.....x...........:.....:..:..:..:.....:..:..x...........::.x..x.....xx:..x:.....x:.:.:.::...x.. 57M1D16M2I51M1I35M1D4M37I17M6D61M12D18M4D9M2D11M8I140M 294/419 70.2% 467/94230402 0.0% 74/419 17.7% 78355968 NA +20361 chr4 + 190214555 114829714 114829713 114831057 1344 TTTCTTGTTACTAGTTTTGAAATAGCTGTTT---------------GCAAATATTTTTGCTAGAG----TAATTCAAAGAT-TAAAAAATTATTACCTCTGGATCCATAGGTGGATATTTTCGGCCTTTGCTTTTTCCAAGGCATTTTGTCTTTCCTCCTTCCAGTAATTGACACCAAAAACCCTTTTGGGGATCAAACCTACAGTACATAAAACATAATGATTACA----------AATTGTATGCAGAATTTT------------------CAGTGAGACAGCC----------------TCACCAATTGA-ATAAA----------------GGAAATGTATTT--TTGTATGCCCACTGATTTAATTTAATTCATTTTTACAGATATTTATTTAGCTGATTTGAGAGAGGCTAACTGAGATGAAAGAAGCTAT--ATGTTATTATATATTTTAAGTAGCTAT-----ACTATACTGAAAAAAGAAATAGA-------TCTTTAGTTTACTTTTACATGA---------------------ACATTTTTAA------------------CTTAAGTTCCTTAGCTTACCTATG-----------CATCCATAAAAGATCAAAG----ACCAATAACTGAAATTACAGC------CAATATATAAAGGAACTTT------AGGAT---------ACTTTATTTACTTATGGATGTG------ATTTCAAAGATATGTTAACAGACTTATTTGAAATCATTCACTGGTATATATTAAAGGGGTTGAATGTAATGTAGGTATACTTCTGTGAATATAAACATGAATTAAAGCTTTCAGTTCAGAAATTATTGCAT-TTTTTACAGTT-CAAAATGCTTACACTTTTCAAAAAACAAATTAGAAGTGTAAAAATAAAGTGGAAGATTAGAC----------------------------AACCTCTTAT-----TTCTCTTGTTGAA----------------------GGCAGATAATCTGTTA-------GATAATTCAGGTAC-------------------CTATATTCTTACAGAAAACTCTAATGTCGTTTTGCTCACATAGC-TGCACTGAGTTATAAA------------------AGAAAGGATGTGTGGCCTAATTT--GTTTTTAAAAGTCAAATATGTAAGAATTTTTGTTTAGGACTAACAGGAGAGGAAAAACGGAAGAATGAACCAAATAGGAAGGGAAATTTTAAGTTCATTACTATGGGACTTGCTGCATGCATAAAACATCGAAAAGGTTTGCATTTTTGCTGCTCAGCAGATGTTTTAGAAGGATGAAGCATAATTGACTGGGATATAAAGTTAATTAGTTGCAGAATATTTTGTTGCCCTGGGCCCATTCCTATAATACTGGTGCACCTGCAATTTGCTTCTGTACATATGTGAATTCATTTAGGGGGAGAGGGAAGTTTTCTTCACAGTTCT----CTGCCCAACCTATTATTAGAGACCTGAACCTTGCAGTCCAAGTTGTCCTAGTACATGTTGTAAATTAAAATTAAATACATCACTAGTTAAATGGATA----AAAGAAAGAGTCATTTCCAACCTGGACTTTTCTTTTT chr4 - 94230402 36472196 36472195 36473776 57756627 57756626 57758207 1581 tttattattactatttttaaaGTGCTTGCTCTAGGATTCAAACACAGCACTTGTATTTAAAAAAAACATTAACTTAAATCTCTGTAAAGCCTTTACCTCTTGGTCCATTGGTGGGTATTTTCGACCTTTGCTTTTTCCCAGGCACTTTGTTTTCCCTCCTTCCAGTAACTGGCACCAAAAGCCCTTCTGAGGGTCAAACCTA-------TAAAGGATTATAATTATATGTAAGATTTAATTACA-GAAGAATCTCACAGCTACCATAATATCACAGTTAGCTAACAATTATGGCTGCACACATCTCTAGATGACATAAATAGTGAGAACAGAGTGGGAAGTAGCTTTCCTCTCATGAAAGCTCTGGGAATTTAATATTTTCCCCCA---ATTCATTT--------TGAGAGTGGCTCA-----AGGCAATAAGTTTTTCACATTGTACTTTACCTGTACTATCTATTTCTTATTCTACTAGCCCAGCATATAGAGTACACGTTTCAAATGTAATGCTATAGGATGCCAATTGTGGTTCTGAAGGACAACCTCAAAGGTCTTCCAGACCGTCACTCATATTCTGTAGTCTGGTTTTGATCAGAGATGTTATCCATGTCGGATCCAAGCAGGATCAATGCTTACATTTTGATCAGTTGACAAAGAACAAAGAAACCTTTGTTGGAGAATTACTGACCAACTCTTTTCCTGGAAGTATGTGCACTGTATTCTCAAGA-GTGTTATCATTTTGATCAAGAAAAGCGCTCCAG-ATGGCCAGTAGGAGCTGATAATATTGTAGGT-CAGTACTGTTAATGTGAA-AGAGGTTAAAAAGAGCAATCTGATATATTTTGCAGATTTTGACAGTCACAGAAT-----CAATCCTTAAG--------TATATTTCTAAAAGTAAAGTGTGTGATTGGACTATAAAATGATAAGAAATCTAATATAAAAATGTTTTATGTTGATTTTCTGAGTGAAATAAGTAGTGCTTATGTTTTCTGACAGAATGCCTGTTTTTTGGTTGGTAATTGAGCTCCACCTGGGAAGCTGGTTGTTCCATATCATTA-----GGCCTAAGTATCACTTCCATTCCAAAGAAGGCATTGAAATATAAACACTGTCTTAACAATATTATATGAAATATGCAATTTGATTTTGATGTCTAAAATTCAAAGATATAGGAATATTAGATTAAGAC----ATTAGAGCACATACTAAGGAATGAACAACACACAATGTTAAGTTTCGAATTTATTGCAGTGGGACTTGCAGCACTCATAAGGCACTGAAAAGGTTTG--TTTCTGCTATTCAGCAGATGTTTGAGAAGGATGAAGTATAATTGTCTGGAACATGGAGTTAATTAGTTACAGACTACCTTTCTGCCCTGGATCTGTCCATATGACATGGGCATACCTGTGATTTGCTGCTGTACAGAACTGAATTAATTTCTGAAGAAGCGTGAACCTTCTTCACCTTTTTTTTCTTGCCCAGCCTATTATTGCAAGCCTGGCCCTTGTTTCCTAAATTATTTCAGTAGCCG-TATCAATTAAAAATAAATAAATCATTGATTAAATGGGTATATTGATAATAGAATCCTTTCTACTTTGGCCTTCTCCTTCT ...x..:......x....:..:.:x:..:.:---------------...xx.:.x...:xx.:.:----...:.:...xx.-.:x...:::x........x.:.....x.....:........:..............x.....:.....:..:..............:..:........:.....:..:..:.........-------....:x..x..:....:.----------....::.-.x.....:.:------------------....x..x:.:.x----------------..x.:.:x...-.....----------------....:.:xx...--.:x:...xxx:..xxxxx........x:x..:::x..---...:....--------......x....x.-----.x.x..x...:.x.--.::..:.xx.x..::.xx.x..x....-----.:.x....::xxx.:x.x.....-------.:.:x.:.x..x.x:..:.x..---------------------...x::.:..------------------..:.x:...:x...::.:x:.x..-----------:......:xx:....x...----.:....:x:.:x.x..xx.x.------...x:x.:....:...:..------..:..---------...:.x..:x:xx.x.x.....------...::x....-:.....x..xx:.x..:x::..xx::x.x.::.-..:xx:x:x...:.:...xx:..x.......-:.x.x....x...:.:..-.x:::.....:xxxx..:.::::x.xx.x.....x-....x.....:-..:...-----..x.::.:..:--------..x.xx.x.....:.......x:x....:...----------------------------..:x.:....-----..:...x:x....----------------------.:....xx::.....x-------.:.....x..x.x.-------------------.:....:x...-----::.::x.:.:..::..:xx.:x..x..x-x...:...:x......------------------.x.x:::..:..:::::.:....--:.x.:.....x.....x..:..:....x..x.x...:...----.xx....x.x.x..x:.:........x.x.:.x:.x.xx..:...::.:..:...:.x:..........x...:x.....::..::...........--...:....::.............x............:.......x....:.:..::............:....x..::..x:........::.::.:.x...:.:.:x..:::.....::.......x.......x.xx......x....xx.::..::x.x:.:::........xx..:.----:......:.........:x.::....:x.....:xx:.:..:..:.:::....xx:.-.:.x........x......x....:.::........:..----:.x:.x...:..x....:.x::...x...:..:..:. 31M15I19M4I12M1I120M7D18M10I7M1D10M18I13M16I11M1I5M16I12M2I37M3D8M8D13M5D14M2I27M5I23M7I22M21I10M18I24M11I19M4I21M6I19M6I5M9I22M6I10M1D33M1D31M1D18M1D35M1I11M1I6M5D11M8D32M28I10M5I13M22I16M7I14M19I11M5D28M1I16M18I23M2I40M4D97M2D181M4I57M1D39M4I37M 854/1291 66.2% 1581/94230402 0.0% 343/1291 26.6% 78357518 NA +5093 chr4 + 190214555 114831352 114831351 114831537 186 TCCAACCTGGACTTTTCAATCTGCTCTTTGCCTGTCACAATCCTTTCTCCTGTTTTCATTAATTTCCCAAGAGGAAAAACAATTCAGCATGCTGTATAAAATGAGATGAAGTTGGCATAACAGTGCCCCTAAACATTGTTTTCTGCCTCAGGATGAGAATATTTAACTGCATTAAGGTAAAATACA chr4 - 94230402 36473755 36473754 36473933 57756470 57756469 57756648 179 TCTACTTTGGCCTTCTCCTTCTGCTCATTGCATACAGAAGCATGTTAGCTGGCTTTCACTAATTTCCCAAGAGGAGAAGTAATATAGTATGCGACATAAAAGGA----AAACT-ACAAAATCATGCCCCGAACAAT--ATTTCTGCCTCAGACTCAGCATACTGAATATTATTAAAGGAATGTATA ..:.x::...x...:..xx.......x....x.::x:x.::x:x..xx.:x.:.....:................:..::...x:..:....x::......x..----..::.-:..x..:x:......x..xx..--x............:x.x..x...:.x..:xx:.....:.x..x:..:. 104M4D5M1D22M2D48M 117/179 65.4% 179/94230402 0.0% 7/179 3.9% 78357597 NA +9812 chr4 + 190214555 114833510 114833509 114833793 284 TTCTAGCTAGTATTAATGATGTTATATACACACCTACCAGTGAT-----AATTTATGAT-------GGCAAATAATGGAAATGAAATCAAGCATGACAATAGACTCACGTTAGTGCTTCAGAGTAATTATAACGAGGTGTAACTCCCAGAAACTTCTGGACTTCATCCATCACAGTAGCTGGGTCAGATCTCAGCTGCTGTCCATCAATAATTAGCAACTGTAAAGTCAGAAATAGTCACTTTATGAAGAAAAAAATTAAATTGAATAGACTGTGATGCCTTCCTTTACCTGGTGT chr4 - 94230402 36476310 36476309 36476576 57753827 57753826 57754093 267 TTCTTGTGAGTTTT--TGTTGTTGTTTGCA-----ACTAATGATGTACTAATCTGTGATTCCATAGGACAGATGATAAAAA-------------------AGACTCACGTTAGAGCTTCAGAGTAATTATAGTGAGGAGAGACTCCAAGGAACTTCTGCACTTCATCCATCACAGTAGCTGGGTCACTTCTTAGCTGCTGTCCATCAATAATTAGCAACTATAGGGATAAATAT-GCCAGTCAGTGAGAAACAGATTGAGGTTCAAGAAA--GGAATAACATTATTTCCTTGTTGT ....x.:x...x..--..x....:.x.:..-----..:.:....-----...:.:....-------.:..:..:..::...-------------------.............x.................::....x.x:.....x..:........x...........................xx...:............................:..::.x:.:.x..-.:..x.:x:...::..x.:.x.x.::..x..x.:.--.x:..:x.x.:x...x.:..x... 14M2D14M5D9M5I10M7I15M19D134M1D35M2D24M 193/255 75.7% 267/94230402 0.0% 41/255 16.1% 78357200 NA +9261 chr4 + 190214555 114839374 114839373 114839550 177 TTACCTGAGAAGTAGCAAAGTAAGTTAGCCATCTTTCTATGTGGACTGCATACCATCCAGGTACTAGGCATCTTCTCTGCAAAGTTTTTAAGTCAGATGGAGCCCAATGTCCTGTTGAAATAACTTCATAGAAATTGAACCTCAGAGCAGCTGGATCTTCATGTGATCGTTGGTGCT chr4 - 94230402 36479470 36479469 36479646 57750757 57750756 57750933 177 TTACCTGTGAAGCTGGGTAGTGAGTTAGCCATCGTTCAATGTGGACAGCATACCATCCAGGCGTCAGACACCTCTTCTGGAGAGTCCTTATCTCTGAGGGTGCCCAGGGGCTTGACGTAATGACTTCATAAAAATTGAATTTCAGGGCAGTGGGATCCTCATGAGAGCGCTGATGCT .......x....:x.x:x...:...........x...x........x..............::::..:..:..::....x.:...::...xx..x..x..x.....:x.x.:..x:.x...:........:........::....:....:x.....:.....x..x..:..:.... 177M 131/177 74.0% 177/94230402 0.0% 0/177 0.0% 78359904 NA +7792 chr4 + 190214555 114845816 114845815 114846035 220 ACCATACCTGGTACCAAGAGTATGCCCTGTCTGAGGGGTCAATGAGGATGGTGATGATCTTGGCTTTGGGGACAAGAGATGCGGCTCGTCTTGGAGCTTCTTCCGAATGGAAGTAATTAGCACTCTTTTC---AAACAGAAAGTCACTTGTAGTATTGGATGGTGTAGGGAAAAAGTCCATATACCTG---AAGGCAGAGAAAGACAATTAATTAATCTGAAAATA chr4 - 94230402 36960186 36960185 36960407 57269996 57269995 57270217 222 ATTATGCCTGATACCAGGAGAACAAT-GATCTGATGCATCAGTGAGGACTGTGATAATCTTGGCCTTGGGGGCCAGAAAACTGGCTCATGCAGGAGCTTTCTCAGAATAGAAATAATTGGCACTTTTCTCTATGAGTAAAGAAAAACTAGTTGCATTGATCAGAATGGGGAAAAATTCCATGTACGTGATCAAGTTAGAGACAGA-AATT--TTGATCAAAAAGTA .::..:....:.....:...x.::x:-x:.....x.x:...:......:x.....:........:......:.x...:.xx:.....:.x:x.......::..x....:...:.....:.....:..:..---:.::.:.:.:xx...x..x.:....:x::.x:.:........x.....:...x..---...x:.....x...-....--..:...x:...:.. 26M1D103M3I55M3I14M1D4M2D14M 150/216 69.4% 222/94230402 0.0% 10/216 4.6% 77885630 NA +12245 chr4 + 190214555 114845817 114845816 114846033 217 CCATACCTGGTACCAAGAGTATGCCCTGTCTGAGGGGTCAATGAGGATGGTGATGATCTTGGCTTTGGGGACAAGAGATGCGGCTCGTCTTGGAGCTTCTTCCGAATGGAAGTAATTAGCACTCTTTTCAAACAGAAAGTCACTTGTAGTATTGGATGGTGTAGGGAAAAAGTCCATATACCT-GAAGGCAGAGAAAGACAATTAATTAATCTGAAAA chr4 - 94230402 36480770 36480769 36480982 57749421 57749420 57749633 213 CCATACCTGATACCAAGAATAGGCACGGTCAGATGGGTCGATGAGGATGGTGATGATCTTGGCCTTGGGGATGAGGGAAGCTGCTCGTTTAGGAGCTTCCTCAGAATGAAAATAGTTGGCACTTTTCTCAAAGAGAAGGTCAGTGGTGGTGTTGGAAGGAGTGGGGAAGAAATCCATGTACCTGGGAGGTAAAGA-----AATTAATTAGAATTAAAA .........:........:..x..x.x...x..x.....:.......................:.......::..:..x..x......:.x........:..x.....:..:..:..:.....:..:.....x....:....x.x..:..:.....x..x..:.....:..:.....:.....-.:...:.:...-----.........:xx.x.... 183M1I11M5D18M 169/212 79.7% 213/94230402 0.0% 6/212 2.8% 78365047 NA +3036 chr4 + 190214555 114847393 114847392 114847449 57 AAAAAAAAAAAAAAAAAAAAAAAAGTGTCTTTCATTGCAAACAGGTTCATGCATGAT chr4 - 94230402 30672715 30672714 30672771 63557632 63557631 63557688 57 AGAAAAAAAAAAAAAAGAAAAAATTTGTCTTACATTGGAATTATGTACGTATATGAT .:..............:......xx......x.....x..x:.x..x.:.::..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 84174678 NA +16099 chr4 + 190214555 114848063 114848062 114848426 364 TGATTAAACATATCATCATTATAAATTAATTTCTAATTCACTGTGGTGA---------------ATTTATCCTGTAATTATGCAGATGCCACACATACATCTGTA--ATTGCTCTGCAGTGATTGAGCATGTGTTAATAATGGA-ATTTATTTTTTGTTATTTTTCTTACCAGTCTATTCCTTTGTGATAGTTGTTGCCATTAAAGAACTGAACTTCCTCAAATGTCTTTGGACTAGGGAGATTGCTGATGATTGAAGGATGCATAAGAAGAAATAAATAAAGTGCAGTTGTTCCTGTTACAA---AAAAAGAAAGTAAAAGGTTATATGGCAATAAGAGACAAAATATTATTTTAGCATATTTTTGCTCAAAAAGTAATATTAA chr4 - 94230402 36482701 36482700 36483077 57747326 57747325 57747702 377 TGATTAAATGTCCTATCATTAGAAGTAAGATTCTCATTCTCTCTGATAATGCCAAGCATAACAAATTAATCCAGTATTTACATAGATGTCATACATGCTACTGTATGATTG--------TGATTCAGCATGTTTTAATAATGAATACTTCATTTTTGTTATTTTCCTTACCAGTCAATTCCTTTGTGATAGTTGTTCCCATTGAAGAACTGAACTTCTTCGAATGTTTTTGGGCTAGGGATATTACTGATAATAGAAGGATGCATCAGAAGAAATAAATAAAGTGCTGTTGTTCCTACAACAACACAAAGAGATGTCATTAGGATACATTAAAAAAAAAAGAAAAAAACAACGTTGACTTAATTGATTTAAGAAAGTACTTCTAA ........::.x::.......x..:.x.:x....x....x..x..:.:.---------------...x....x...x...:::.....:..:....:.xx.....--....--------.....x.......x.........:.-.:..xx.............:..........x....................x.....:..............:..:.....:.....:.......x...:.....:..x...........x....................x.........::x....---...:...x:x:.xx...x..:..x:x..x..:.::x....x.:x.:x..::.x..x..xxx:.x.:......x.x:... 49M15I41M2I4M8D25M1I158M3I79M 272/356 76.4% 377/94230402 0.0% 29/356 8.1% 78365362 NA +7831 chr4 + 190214555 114852718 114852717 114852842 125 TTTTTACCTGTTTTTTGTGGACCAATTACTAGAAATTTTGGTAAGTGGTCACAAGTTTTCTCTCTGGACCAGATGTCTTTGTGTCGTTTATCATCACATGGATTCTGCAAGAAGGAAGAATAAGT chr4 - 94230402 36484712 36484711 36484835 57745568 57745567 57745691 124 TTCTTACCTGTTTTCTGGGGTCCTATAACAAGAAATTTGGGTAGATGGTCACAAGTTTTGTCTCTGGGCCAAATATCTCTGTGTCGTTTGTCATCACATGGATTCTG-AAGAAGAAAAACAGAGT ..:...........:..x..x..x..x..x........x....::..............x.......:...:..:...:..........:.................-......:..:.xx:... 107M1D17M 103/124 83.1% 124/94230402 0.0% 1/124 0.8% 78368006 NA +3353 chr4 + 190214555 114867618 114867617 114867672 55 GTGGTTTT--GGTTCCCATAATGAGAATTATAAAAAAAAAAAAAAAAAGCAAAAAAA chr4 - 94230402 78874796 78874795 78874852 15355551 15355550 15355607 57 GTGACTTTCAGATTCCCATAACGATAATTACAAAAAAAAAAAAAAAAAGAAGAAAGA ...::...--.:.........:..x.....:..................x.:...:. 8M2I47M 46/55 83.6% 57/94230402 0.0% 2/55 3.6% 35992822 NA +12892 chr4 + 190214555 114870747 114870746 114870958 212 AGAGAGAATGTTAAATGTTACCTGCCATAGAGGGTCTTTCTGCTCAGGGAAGAGCTCAAAATACTGGTGGGCCAGTTGCACTGGAGGCAGAGTTTGCAATTTCAGGTTGGTCCAGCTCTGCACAAAGTTGACCAAGTTCACAAAGGTATATAACCCTAGGCGGTCATTTCCATAGTTTGATAAATGGGTCATGAAAATGCTGATCTGAAAGA chr4 - 94230402 36487109 36487108 36487320 57743083 57743082 57743294 212 AGGGAGAGGTCAGGACATTACCTGCCAAAGGGGGTCCGTCTGCTCAGGGAAGAGTTCAAAGTACTTGTGTGCCAGCTGGATGGGTGGCAGTGTCTGCAGTTGCAGGTTGGTCGAGCTCTTCACAAAGCTGGCCAGGTTTGAGAAGGTGTACAGCCCCAGGCGGTCATTCCCATAATTAGACAAATGGGTCATGAAGATGCTGATCTGGGAGA ..:....:xx:x::.::..........x..:.....:x................:.....:....x...x.....:..x.:x..x.....x..:....:..x..........x......x.......:..:...:...::x:.....:..:.:...:...........:.....:..x..:..............:...........::... 212M 165/212 77.8% 212/94230402 0.0% 0/212 0.0% 78383638 NA +5760 chr4 + 190214555 114876152 114876151 114876454 303 GGCAGCTTGCTTTGTGCTCACGCTGCAGCACAGTATT-----TTTCAAGATAGGCATTAAATATTAGCAGTCGG-----TTTCCATTTTTGCCTTTGTGGCTCTGATAGCGTGCCCCTTTTCAGA--ATAGTTCATTGTGTTTAAAAATATGTCCATTAGCTTGTTAAATTATTGATTATGCTTTTAGTTCTCATAAAATGTGAAGATAGATGGAATATAGGGAAATACATCCCTGATGGCTCATCTGATGGGCTTTGGCATTGTACTCACATTTTTCTTATAAAAGGTAATTTTGTGTCT----TTATTTTATTCTAA chr4 - 94230402 36489534 36489533 36489846 57740557 57740556 57740869 313 GGCTGCATACGCTGTGGCCATAGTGCAGTGTGCTGCTCTGCCTTCCAAGGTA---ACCACAGGTCAACAAGCCACGTACTTCCCCCTTCTACCACTGTG--CTTGCTACTCTGGTGCTTTTTAAGTGGCAGCCTACAATGTTTAAAAACCTACCCATTAGCGTGTTATATTATTTATGAGGATTTTAGTACTTCTCTAAGGTGAAGATTAGTGGAGCTTAACAGAAAGTGTCTGTCATGGCCTATTTGCAGCGTGTTTGCACAGTACTTGCTTTACTC-CATGCAAGGTAACTTATTGTTTGCTCTTATTCTGTTCTGA ...x..x.:.x:....x:..::x.....::::x.::.-----..:....:..---.::.x.x:.:.:..:x.x:-----..:..x:..:.:..x:....--::..x..x:x..x:x.....:.::--::..:::.:x:..........:x.::........x.....x......x..x.x.x.......x..:x.xx..x........x::....::x..:x::..x:::..:x.x.....::..:..xx.x.:x..x...:x.....::.x..x:..-:..:x.......:..xx...:.----.....:.:....:. 37M5I10M3D19M5I20M2D24M2I151M1D22M4I14M 181/297 60.9% 313/94230402 0.0% 22/297 7.4% 78386618 NA +3761 chr4 + 190214555 114877940 114877939 114878060 121 AAGAGAAAGAGGAGAGGAAAAAAAAAATA-------AAGAAGGAAAGAAAATGGAAGAAATAAAGAAAGAAAGGAAGAAGAGAAAAGAAAGAGAAAAAAGAAATGAAAGGAAAAAGGAAAGGAGAAAA chr4 - 94230402 22272917 22272916 22273043 71957360 71957359 71957486 127 AAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTA-AGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAA ................::........:x.-------..x...xx...:..x..xx.::.x..:.:::..x..x...xx.-....:.:::..:.:.x...x.x.x:..:........:x..:...:x.. 29M7I43M1D48M 81/120 67.5% 127/94230402 0.0% 8/120 6.7% 92605023 NA +3468 chr4 + 190214555 114877963 114877962 114878058 96 AAAATAAAGAAGGAAAGAAAATGGAAGAAATAAAGAAAGAAAGGAAGAAGAGAAAAGAAAGAGAAA--AAAGAAATGAAAGGAAAAAGGAAAGGAGAA chr4 - 94230402 53683455 53683454 53683552 40546851 40546850 40546948 98 AACAAAAAGAAAAACAAGAACTGGAGGGAATCAAAATCCAAAGGAAGGAGAAAACAGAAAGAGAAATCAATAAGAAGCAAGGAAGCAAGAGATTGGAA ..x.x......::.x.::..x....:.:...x..:.xxx........:...:..x...........--..x:.:.x.x......:x.:..:.xx:... 66M2I30M 66/96 68.8% 98/94230402 0.0% 2/96 2.1% 61194508 NA +13890 chr4 + 190214555 114885022 114885021 114885558 537 GTCTGCCTTTTTCCTCTTTTCTACTCTCTTGTATG---CTGATATAAATTGGGGTTTTGCTAGTCTCAGACTTTTTATTATACTAGCAAAATGTTCTATAATTTC--------CAAGCTGTCAAAATCTGATCTGCATGCCAACAGGCTATATTTTTAAATACATGAATAA-----CATTGTGAACAAAAACATTCCTGTCAACTGTCCATTTCCCAGTACTAAAACATCTCCATCCTTGGTTATCTGTCACACAAGT---TCTTTGAGATTTGAGTGTTGAACATGTGTCACATGCTGACAGTCTACCATTACAGATTATAGTCTGCTATTATAGATTAAAAAGCATTGTCC-ATTCATTGCTGCTGGATCTCCTAGAACATTTGGACATGGTAACTCAACAAACAGCTGCAGTAACAAAGAATTG---CTGAAACCTAGATTT-TGTGTTGACAGAGCATTAATTTTAATAATGACAAATTGTCT---CAGAATTCAATGCTTTTTATAATATATTCATGACCCTTCTGGTCCTGAAACAAAGTAATTTGTGTGCCTGAAAA chr4 - 94230402 36495970 36495969 36496516 57733887 57733886 57734433 547 GTTTACTGCTCTTCTCTGTTCCTCTTCCATGGATGTTTCTCAGAAAAAT--GAATTTTGCTCTTCTGTCTTTTTCCATTGTGCTTGGAAAATGCTATGCAGTTGCTCCAAGAGCAAGCTCTCATAATTGGATCTAGATGGTAGCATGTTGTATTTCTGAATGTGTAAATGGTATGTCATGGCTGAGAAATGCAAAACTGTCAAGTGTCCATTTACTAATAC-GAAGTAGCTCTATGCTAGGCTGAC---CACAGAAATACCTCTTTCAATTTCAAGTGTTCAATGTATTTCACATCCTGACAGCCTCTTATTATGAATTGCAGACTTTTCTTGTACCTTATGAGCCAGAGCCCCATTCGCTGATAATGAATT--CTAGAATGCTGAGCCCT--TAATGCAGCTGTTTG-TGCAATAGCACAAAAAGGAAGCTGGAACTGAGACTTCTGTGTTGACAAAGCACTAATTTTAATAATGACAAATTGTTTCTCCAGAATTCAGCACTGTT-----CATATTCATGGCCCTTCTGCTACT-AAGCAAAGTCATCCACATGCCTGAAAA ..:.:.:x:.:.:....x...:x..::.x..x...---..x.x.x....--.::.......xx...xxxx:...::...:.:..x.x......:.x.::.:..x.--------......x...x...:x.....:x...x:.:..x.:.:.....:.:...:::.:...::-----...x.:x:.x...x:..xxx.......x.........x.:.:...-:..::.x...:..x..x..:.:x.---....x..:.---.....x.:x..::......x..::.:.x......x.......:..x::....:::...::..x..x:.x..:..xx...x:.:x..xx.:..-....::..x.:x..:..:--......:::.x:.x.x.--...:x..:.x:x:x.-....:..:..x.:..xx.---...:...:x...:..-..........:....:.......................:.---.........:::..x..-----:.........:........x.x..-..:......x..:::::.......... 35M3I11M2D54M8I58M5I45M1D24M3D9M3I92M1I18M2D17M2D15M1D18M3I15M1I41M3I17M5D24M1D27M 352/520 67.7% 547/94230402 0.0% 44/520 8.5% 78389052 NA +25750 chr4 + 190214555 114905499 114905498 114906451 953 TGAATTTGAAATATAAAAATATAAGTTATTTGCTTTTCATGACTTTGTTTTTGTCA---------------------------AGCTGATTTCAATAGCAACATTTTAAAAACTACTTGCAAATGATAATTAATTAACATCTATTTTGAAGTCTTACTATGTGTAAATAAACCTTAAAATTCATTTTATTCACTA--------TTCAG----------------------TCAGTTCAGTAGAGATTATTATATTTTCAAATTAACCATTATCCAATTAATTTTGAATGATAAACAGCACAGTTGGAATACTGTTCTTTTTCATTTACTTC-ATTAAAGATTCATTTTAGGTAATCAGAGAATTTTGTATCAGCTGTTTTTTACCTTAAAGGTTTGTTTCTGACACTTTAATAAATTGTTCTGTAGTCTGTGCTGGAAGGTAACTGA------ATTTTTTTTGCTCAACAGCCCTCTCTTTGACACATGTTCATTTATTACTATTTCTTCCATCAGCTGACTCACTTGAGGCTAATTCTGATGAAGTGCTTTCAAACAAGGACC--ACTATTGGTTTACATTAACGAGGAAGTGGTGGAACGGCAGCTTCAGAACAGGAGAAATTAGAAAAAGAAAAATGATG---AACCTTGGGATCAATTTTTCTATG-----AGTCATAACATAATTAACTATAAAATACGAAGCTGAAAAGTATTATTCTCAGTAGACTGATATTTTGCCTCATTTAGGAATTCTAT---ATTAAAAAAACAAGGGAGAAAGATTGAAAAGAAAGATAGACTTAGTCATATTTAGA-AAGAAAAATTGTGCAGAAAAGCTTGAGTTAGGAAGAAACAGATTTAATCATATATCTGGAGTTGGATGATAAAAGTCCCTTCTAGTTTTATGTTTGCACTCTAATTTTTCTATCATGTTATCTTCTCTAGCGGCATTTTTTTTTGTTATGAAAGGAGATATTCG----GGGGAGATTATTCCATAGATAAGCATTCTCTAGTAACATACTGTTC chr4 - 94230402 36500375 36500374 36501358 57729045 57729044 57730028 984 TAGATTGGAGATGCAAGAA-ATTTATCATTTGTTTTT-ATAACTGTTCTACTGTCATGTTACTATTCTTGCAGTTTTATGAAGAGCTGACT------GCTGTGTGTTATAGAGTATTCATAAATGATGATTAATTAA--TCTATTTTGGTGGCCTACTATGAGCAAATAAACCTCAGAGTTAATTTAATTCTCTACTCTTGGTTTCAGAGGGGAAAAAAATACAACATTTTCAGTTCACTAGAGGATATAATATTCCCAAATCAGCCACTTTTCAATTAATTTTAAATGGCGAACAGAGCAAG-GAAATTTTGTTCTTGTCCATTTACTCCTATTAAGGATTCATTTTCAATAATCAGAGAATTCTGAGTCAGCTCATTCTTACCTTAAAGGTTTGCTCCTGACAATTTAATAAATTATTGTATGGTGTGTGCTTGAAGGCAACAGATTCTTTTTCTTTTTTTCCCAATAACCCTCTTGTTGACACACAGCCATTTATTACTATTTCTGCCATCACCTAGCTTGCTGAGAAGTAATTCTGATAAAGCACCCAAACGTATGGTGTGGAGTATCAACTGTCATAAAGAAGGAA-------------AATGTCATGAAAGGAAA----AGAGAAAGAAAGATCATGTGTTATCCTAGAAACATCTTCTTTATGCTCTCAGTTTCAAGCTAATTAGTTTCTAAATATGCTGCCG-AAGGCTTGAGTTTCCATAGGATAGTATTT----TCCTATACCAGCTCTTTCCAGCTGGTATGGCAGTGTAGGATG------AAGGAAG--------AATTATTTTTAAAGGAGAAAAAGGATTC--AAAAGCCTGAGCAAGGTTGAAATGGATGTAATCATACACCTGAAGTTGAATGATAAAAGTGGCTTCAACTTCTATGTCTGTATTATAATATTTATATCATGTTATCAGTGCTTACAGGGCTTCCAGTTACAAAAGAGATGGCTATTGGGGAAGGGGTGACTGTG--GTAGATAGAGGCACTTTTGTAGCATGTTGTCC .::...x..:..::..:..-..xx:.:.....:....-..:...x.x:.x:.....---------------------------......:.------..x:::.x...x.:.x..:.:::.......:.........--.........:x.x.:.......x.:..........:.:.:..x....x....x...--------.....----------------------........x.....:x...x.....::.....:.:...:.x.:...........:....:::.....x:..:x-.:...x:.......x.:........:.-.....:..........x::.............:..x:......xx..:................:.:......x...........:..x.:.:..x......x.....:...x..------x.:......x.:...:.:......:x........::x:.................x......x..::..::..x::::x..........:...::.::xx.x::.x..xx:--.x...::::.xx...x..x:.....-------------.::x...x:.x....:.----...:.......:..x...---x.:.:.:.:.x..x:..:.:....-----...:x:..xx......::.x:x.....:.xx..:.-..:.:x.x.x.:..x:...:x.::.....----..x.x..xx.::...x.---::.::x.x::..:x.x..:.x.------...:...--------.:.:..x....:.-:.......xx:.x.--......:....:x...xx....::...x........:.:...:.....:...........xx....x.x..:.....:..:.:.x....x...x............xx:x..x:.:.x::..::xx..::x.x::.::x:.x....x.----....x..:.:.x--:......::x::x..:.x...:...::...:. 19M1D17M1D18M27I8M6D40M2D56M8I5M22I73M1D27M1I115M6I111M2I25M13D17M4D18M3I24M5I35M1D29M4D17M3I22M6D7M8D13M1I14M2D148M4I12M2D32M 622/902 69.0% 984/94230402 0.0% 133/902 14.7% 78405124 NA +7946 chr4 + 190214555 114909977 114909976 114910221 245 TTGTAAGGG-GATGGTATTTAGAGCTGTATTTATTAGCTTATCTTGTCTGTTAAACATTTATGAGCTAGTTCTTTATCATCCAAAACGCCAAGGGAGCAAGAAAGATGAGCT-GGAAAAAAGATACTATGAGACTTGTGGACACTGAAGAGATATGAT-CACAGGTTG-----GAT----------------TCTGTCTCAGGATGTTTTAAATATGTCAGAGCACATTCTCTCAAGATCCACTCAAGAGCTTGATGAAGGAATAGGGG chr4 - 94230402 36503598 36503597 36503848 57726555 57726554 57726805 251 TTGTAATGGTGATAATATTTAGGGCTGTATTTATTAGCTTATCTTGGCTGTTAAATGTTTATGA--CTGTACTTTATCGTCTATGAAGCAGGGGGAGTAAAGGAGATGAACTAGAAAAAAAGATACTGAAGACCTTGTGGATACTGC--TGGTGTGATATACAGGTTGCTGTAGATGTGATATACAGAACAATTTGTAAGAGTGGGCTTTAAATATGCCTGAGCATTT--------------CTCAGGAGGCTGAAAAAAGGGTAGTGG ......x..-...::.......:.......................x........::.......--:x..x.......:..:.x:.x..x::.....:..:::......:..-.:............:x:::x........:....x--x.:.:....-:........-----...----------------.:...xxx..x:x.:..........:.x.....:x.--------------....:...x:...x:..:.::...x.. 9M1I54M2D46M1I34M2D9M1I9M5I3M16I36M14D27M 170/227 74.9% 251/94230402 0.0% 42/227 18.5% 78406379 NA +11639 chr4 + 190214555 114925436 114925435 114926355 920 ACAGCTGC-CTTTTCTCTAACCTGTCTGAAGAGCCAGCACTAATCCATAATGTACTGCACCTGCTATTAGATTCCATGAACTCAGAGATTGATATACACG------GAGAAGGAAAGCTCATTAACCAGACTAGGTATATGAAAGTTCAGCAGACAGCACACGGAGAAGTTTATCATTGCAGTTCCATTATACTCTACTGTCAATTTCAAG--TACACCACTCTTTCAGGCACATATTTTTTGTTCACCTGAATTTGCAAGTGGCCAATAGAATAGGTGAGGTTTAGTGAGTCTAGGCACTGCTCTGAACTTT---GGAAAGTGTAATAACTTTTCTGGCTCCTGAACTGC----TATTTTAGAGCATTCTACAA---TCAGAGCCTATTGAAACATATTTGTCAAGAAAACAGAAAATTCTATTTTTAATGTTGCTCTTTGTGTAGCATGAAATTAAAATGAGTAGAAAAAATTAAATCCTGTAGGACATATTAATTTCAAGCTTTTAT-----------ACTTATTGTGGAAACCATCTGATAAGACTCCAGACTGTTTTGACTATTTTCAGTTGCTGCATATTTTATAGGGTAGTGTCTCAAC-----TTGAATGATGGTGGACTACC-TGGTGTAAGCTGTTTCACCTCATACATGATTAAATTATATTTCTTCCTGTCTGAACAAAGATTATTT----GAAAATACAGGAAGGATGTGGCACCAGGGAAATACATGTTAGTATTTGACAAGTGTGGAACAGTGCAGAAAAATATCAATATGTGATGAAGGCATGATA-AGAATCTAAGAAAAATAAGAGGGAGTTATCTGAATGTTAAATAGACAGATGTCGAAGTATGCTTTTGAAATCCCATTGAAATGGCCCTCATATCATTTAATTTTCAATTGTTAGG--CTCATTTGGGCAAAGTAAGTTGGTATCCAGGGAAATCAAGAAA chr4 - 94230402 36508357 36508356 36509239 57721164 57721163 57722046 883 ACAGTTGTTCATTTCCATAATCCATTCAGACAGCACACACTGGTTTATACCATACTGCTCTTG---GTAAAGCCCCCAAAGGCACAGGTTAATATCCAAATGTTTTAAGAAAGTATACTCGTTAATGAACATAGGCGTGCAGAAGTCTACAAGGCTGTATGTTGGAAAATCTCTCATTGC----------TATTCTTATGGAAGTTTGGAGAATAAATCACATTTGCAG---CATACTTTTT-TTCACTGGAGTTTGGAA---------------------------------TAGACATTCTTTTGATCCTTTTCAGAAGATACCATGGATTTTTAGGCTACTAATCTCTATCGTGTTCCAAATTAACCACCAAAACTCTACACCTTTTCTTAC---TTTGAATAAAAGCCAGACCTCCCCATTT-----GTTCATTTGTGTGCTGTCCAAATTTGGTATT--TAAAAAGAAATGGATGC-ATAGCTGTTGCTGATTTCA---TTTTATTCTCTCTTCCTACTCACATCAGTACCCTTCTGAGATAAGGCTGGATTTTTTT-ATTCTCTTCAGC----ACATATTTCATAAGGTAGTGTACCAACCTGACTTGAATGATGGTGGAGTTTTGTGGTATA----TCTTCAGCTCGTACATGATTAAATTATATTTCTTCCTGTCTGAATAAGCACTATATTGGAGTAGATTCATACTTAACTCAGAGTTAGGGAAGTGAGTGTCAGTATTTCACTTGTGTGGCTCAGCTCAATAAAATATCGGT-TTTGATGAGGTAGAGATAGAAAATCATAAAAGTAGAGGGGGGAAAAATC-AAACATTAACAGTATAGATATAAAGCTGTTCTTTTCAAATGCCACCCAA-----TAATATATATTGCGATCTCAAGTTATTGGAACATAGTTTGGTCAAAACAAACTCAAATACTGAGAAACTGAGGAA ....:..:-.x....:x...:.::.::::.x...xx:....::.::...x::......x.:..---x..:.x:..x::..xx..x..:..:....x..x:------:....:.x.x:...:....:x.:xx....::.::::....::.xx..:.x.:.:::x.::..:.:.x.......----------..:...xx..xx.:...x:..--..x.:...x:..x...---....:.....-.....:x..:....x..---------------------------------...:..:.x:.:...x.:..---:...::.::x..::x....:x....x..:.x..x:----.:..::.:.x:.x:.xx...---..x:x:...x..xxx..---....xxx.:..:x....xxx::.:....-----...xx.:.x....:x.:x::..x..::x..x--..:...:..x.::..x.-:...xxxx.::.:......---......-----------...:.:xx::.x.x..x.....x.x:.xx.::..:.x....-.:.x.:.....:----:.......:...:........x:....-----...............x.x::-....:..----x:....x...:.................................:..:x.:...x.----.x.:..x..x:xxx:.:x::.x:::......:.:x:...:.......x..xx......xx...:x..:x........::.-.x......:.xx:x....-.:....xx.:..:x.x.:.:....:xx...-:..::....xx:x.:....:.x:.:x.:.x.....x....x...::x..-----:xx:....xx.x::..:.:x.:..:..:.:--x.x:.....x....::..::.x:x..x.x.:....:::..:.. 8M1I54M3D34M6I74M10D21M2I16M3D10M1D17M33D20M3I35M4I20M3I17M3D28M5D31M2D17M1D19M3D6M11I41M1D12M4D27M5I20M1I7M4D56M4I80M1D18M1I30M1D49M5D30M2I43M 521/840 62.0% 883/94230402 0.0% 123/840 14.6% 78417079 NA +3245 chr4 + 190214555 114927199 114927198 114927251 53 TTTAAAATTAACTTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACA chr4 - 94230402 26564523 26564522 26564575 67665828 67665827 67665880 53 TTTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATATTACA ...:...:...x..:....:.:.:.:.............:...:.:.x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 88362676 NA +3146 chr4 + 190214555 114933420 114933419 114933474 55 TTTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTGTGTGTAAAAACCCAAAAGC chr4 - 94230402 45399593 45399592 45399647 48830756 48830755 48830810 55 TTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTATGCAAAAATTTCAAGGC ..:.:...:.::.................::..:...:..:.....:::x..:.. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 69533827 NA +3120 chr4 + 190214555 114934545 114934544 114934602 58 CTGCCTCTCAAAAAAAAAAAAATAAAATAAAAATAAAAAAAATAAAAATAAAAAGTTG chr4 - 94230402 69060813 69060812 69060870 25169533 25169532 25169590 58 CTTTCCCTCAGTTAAAAAAAAACAAGATAAAAAGAAAAAGTTTAAAAAAAAAAAGTTG ..x:.:....:xx.........:..:.......x.....:xx......x......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 45873732 NA +9791 chr4 + 190214555 114935182 114935181 114935361 180 AAGGTGCATACATAGAATACATACTGGGTTTAGAAGGATTGTGAGAAAAAGTTCACCTCCTCTGATACTTTTATCCAGTTCTTGGGGTCCTCCTGGATATTCTTTGTAGAAAATAGTGTGAGTGAACAACCCACAAGTCTGTCGAGGGAGGACCTGAGTAAAAAAGGGGAAAAACAGCAC chr4 - 94230402 36511469 36511468 36511642 57718761 57718760 57718934 174 AAGGTAGCAAAAGAAGGTACCTACAGGATTCAGGAGAATGGTGAGGAAAAGTTCACCTCCTCGGATACTTTTGTCCAGCTCCTGAGGACCCCCAGGATATTCCTTGTAAAAAATAGTATGAGTGAAAAGGCCACAGGTCTGCCGAGGGAGCACCTGAGAACAAAATG------ACAGCAC .....:xxx.x.x.:::...x...x..:..:..:..:..x.....:................x.........:.....:..:..:..x..:..x........:.....:........:........x.:x.....:.....:........x.......x.x....x.------....... 167M6D7M 137/174 78.7% 174/94230402 0.0% 6/174 3.4% 78423713 NA +13882 chr4 + 190214555 114937316 114937315 114937515 200 ACCATGATGCTATTGTGAATGAAGCCCTTTCTGTACCGGGCAGGTTTCAGATGTGGATATTCTTCAGTGCTGGTGACTTGAATACCCCAGACCTTCTTCCAAGCTGCATACAGCTGAATGTGAACCGGGTAGACCCCTGAGTGATGTGGGGCCACAGCATAGCCCATGTTGATTGGTATTCCATGTTCCTAAAACAAAGC chr4 - 94230402 36513602 36513601 36513801 57716602 57716601 57716801 200 ACCATGATGCCATTGTGGATGAAGCCCCGTCTGTACCGTGCAGGCTTCAGGTGTGGGTATTCTTCTGTGCTGGTCACTCGGATATGCCAGACCTTCTTCCAGGCCTCATACAGCTGGATGTGGACCGGGTAGACCCCAGAGTGGTGTGGAGCCACTGCATAACCCATGTCAGTCGGTATGCCATGCTCCTGCGACACAGC ..........:......:.........:x.........x.....:.....:.....:........x........x...:.:...:x...............:..:x..........:.....:..............x.....:.....:.....x.....:.......:::.:.....x.....:....:x:...x... 200M 166/200 83.0% 200/94230402 0.0% 0/200 0.0% 78423714 NA +12267 chr4 + 190214555 114970423 114970422 114970598 176 TGCTCACCAGTGCAAATTCCTTGTTGAGAATCATCTGCTCTACTAAAGATGACTCGTTGTGGAAGAGGTGGGGCTGCATGTGGCTCCACATGTGAGGAAACCACCAGAACTCATCCACAGACCGAAGTAAAAGGTCATCTCCTTCATCTTCCTCTTCAGTCCCTTTAAAACATAAA chr4 - 94230402 36521988 36521987 36522163 57708240 57708239 57708415 176 TACTTACTAGTGCAAATTCTTTGTTGAGGATCATCTGCTCTACCAGTGACGACTCATTGTGGAAGAGATGAGGCTGCATGTGACTCCACATATGGGGAAACCACCAAAACTCATCCACAGATCTCAACAGCAGGTCATCACCTTCATCTTCCTCTTCAGTGCCTgaaaaagataga .:..:..:...........:........:..............:.:x..:.....:...........:..:...........:........:..:...........:..............:.xx.::.:x........x....................x...xx....x...:. 176M 147/176 83.5% 176/94230402 0.0% 0/176 0.0% 78448435 NA +4060 chr4 + 190214555 114970433 114970432 114970596 164 TGCAAATTCCTTGTTGAGAATCATCTGCTCTACTAAAGATGACTCGTTGTGGAAGAGGTGGGGCTGCATGTGGCTCCACATGTGAGGAAACCACCAGAA---CTCATCCACAGACCGAAGTAAAAGGTCATCTCCTTCATCTTCCTCTTCAGTCCCTTTAAAACATA chr4 - 94230402 36974435 36974434 36974585 57255818 57255817 57255968 151 TACTAACTCTGCGCTGAGGACCATGTGTTCCAGCAGTGATG--------TGAA-----TGAAGCTGCAGATGAGTCCGCATTTGGGGAAAACACCAGAAGCTCTCTGTCATATTC---AGTAATAGGCCTCTGCCTTTGTCTTGTTCCTCAGTGCCTGTAAATCACA .:.x..:..:x:.:....:.:...x..:..:.x:.:x....--------..:.-----..::......x:..:x...:...x..:.....x........---...xx:..:.xx.---.....x...:.x::x....::....x:..:.....x...x....x..:. 41M8D4M5D41M3I13M3D49M 100/148 67.6% 151/94230402 0.0% 19/148 12.8% 77995998 NA +15662 chr4 + 190214555 114977129 114977128 114977368 240 TTCAAAATTTATTTCCTATTTATATGTAGCTGCCTGAGAACACAAAGCTCCTTCTTACCTGTGTGGTAAAACTTCCCTGAAAATCCAAGGTTGAAGGTAAAATTTGCAACCTGAGTGCGCAGTAAATTTTGAGTCTCTAGTAATGCCTGAAATAAATAAGAAATTAACATGATTTTAGAAAAATAAATATGAAGTTTTGGGATGCCTCTTTTGCAAA---TGTGTATGCATGAG----TAAAACAAA chr4 - 94230402 36527099 36527098 36527344 57703059 57703058 57703304 246 TTAAAAACCTATCACCTATTTATCTGTAGCTACCTGAGAACATGATGTTCCTTCTTACCTGTATGGTAAAATTTTCCTGAAAATCCAAGGTTGAAGGTAAAATTTGCAACCTGAGTGCGCAGTAAATTTTGAGTCTCTAGTAAAGCCTGAAATAAATAAGAAATTAACATGCATTTAGAAAAGTGAGTATTAA-TTTTTGAATGCCTCATTTAAAAAAATTGTGTCCAGCTGAGGAGATATAACAAA ..x....::...:x.........x.......:..........::.x.:..............:........:..:....................................................................x...........................xx.........:.:.:...x..-....x.:.......x...:x...---.....x::xx....----..x...... 193M1D23M3I14M4I9M 207/239 86.6% 246/94230402 0.0% 8/239 3.3% 78450030 NA +45156 chr4 + 190214555 114990422 114990421 114991507 1086 GCTCTTTTAAATAAGCTCTTAAGGAATCCCTTGACCAAAAGATATTTTATAAACTACAAGGAT-GTTTTATTAACTGATTCTTTAGTTTGACATTGCAAATATCTCTTATCTTGGGCCAGCAGTGAGATAAAGTCACTTAAAAAAATCTTAC----ATCCCACATTATTTTACATTAATCACTAGAATTACGTTTAGAAATTTTTGAGTG-----ATCTTTATTCTTCCTAATTGTTGCATGTATCAAGCAAGACAGATATATTTCTACAATATCTTTGTTAATAACTAACACATCACACATTTACATAATACACTTTTTGGGACAATTTCTGTGGTAACATTTCATGGCTAATAGGAAGCAATTTGCTTTTCTTTATTAAGTGCATTAAAACTTTATGCCCCAGACATCATTGACAGTAAACATTTGATTCTGCTCAAATTTAACGCACCGAGGCATTTCGCTGTGCCATATTAGGTTTATTTATGTGCTGTGTTCTGCATTGTTAGCTGCTAATGAGACTTCAACTCTTATTGCTCTAAGGCCTGAACACTAACCTCATTTTAATGAGTTCATTATTTGCTGTCTTCTGAGAGGAAGACAACAAATTTTCCTTTTAATTAAAGGTCAAAACACCTCTGGCGAAGTAAAGAGAAGAGGTTATCAAACCCTGGGAGAAGATGAGAG-ATAGCTCTTTCGGATTTCTAAGCTAAGCAGAATGAGTATAGACTGGTGTAGGCCCTGGTTTCTCAAGACTATAGACAGTCGATCAATCTCTCGAGACCATGGTGCACTTATTTAAGACAAATGAGAATAATAC---AACATGATAGCTAATGTGCCTAAGACTTTGTAA-------------------AAAA------------------------------------------------------------------------TGAAAGTCAGCCAAAGTAATTAAAGAGGCTTTACTCCTAACCAAAAGGGCCTTGTGGATCAATACCACTGCAGGAGCAAGACTCCTCTTTTGCATGACGAATGAGTTATGGGGTGAAGAGAACAAATGCCACATTAACTGAGCCAAGAAAAACTATTCTCAAATATTTTACCACTGAAAGTAAAGCAAAGGCAAATAAATATTTTGAAGAACTATTTTTTAATAACATAAAGGGTATGTG chr4 - 94230402 36530925 36530924 36532067 57698336 57698335 57699478 1143 GTTCTTTCAAATACA--------AAAACCATTTGCCAGGA-ATATCTCAAAACTTGTAAGTTTCATTATGTTAATTGATTCTTTATTTTGTCAATG-AAGCTTCTCTC----TGTGACATCCACGAGATATGGTTTCTTCTTTATACTTTATTTATATTCAGCAGTATTTCACATTAATCCATATAATAATTTTTAGTAGATTTGAAGTTGCTGTAGTTTTTTCCTTCATAATTGGTGCATCTATTGCGCAGAAGTGATATTTTTCTGCTATGTCCTTGTTAATTATAACTCTATCCTTCATTTACATAATAAACTTTTTGGGGCAATTTCTTCAGTAACATTTCATGGCTAATAGGAAGCAATTTGCTTTCCTTTATTAAGTACATTAAAACTTCATGCCCCAGACATCATTGACTGTAAACATTTGATTCTGCTCAAATTTAATGCACCAAGGCATTTTGCTCTGCCATATTAGGTTTATTTATGTGCTATGTTCTGGATTGTTAGCTGCTAATGAGACTTCAGCTCTTATTGCTCCGAGGCCTGAACACTAACCTCATTTTAATGAGTTCATTATTTGCTGCCTTCTGAATGGAAGACAACAAATTTTCCTTTTAATTAAAGGTCAAAATACCTCTGGCTAAGAAAAGTGAAGAGGTTATCAAATCCTTAGAGAAAGTAAAAGAATGACTTTTTCTGATTTTGATGCCAAGCATGGGCAGGCCAGATTGAGGTGGAAGGT-ATTTCTCAGGG------------GACCAAAACTCCAA-----------ATCTAACTAAGCTAAATGACAACAACACGAAAACATGGTGGCTGGTGTTCCCAAGATGTGGTAACCACCACCCACCCTCCAGGaaaaaaaaaaaaaaaaaaaaaGCAACTACTAAAAACCAAGCACtatatatatatatataatatatatataCACCACTGAAAGTTGGCCAAA-TAATTAAAGAGGCTTTCCTCCTAACTCAGAGGTCTTTGTGGATCAATACTACTATGAGAGTATGAGCCCTTGTTAGTGTGTGATGTGATTTATAGGGTGCAGAGGACAGATGCTGGATGAAGTGAGTCAA-CAAAGTTAATCTCATATTTTTTATCGGGGAAAGTGAGGCAAATGTGATCA---GTTCTGGGGG-----CTGTTCGTAGTGAGAAGGGTATATG .:.....:.....x:--------:..x..x..x:...::.-....:.:.x..x:.::...xx.-:..x.:....:..........x....x..x..-..::x.....:----..x.x..x.x::......x:..:x...xxxx.x.::...:----..:.x:..x.....:.........xx..x...x.:x.....x.:x...x:...x-----.x:...x.:....x......x.....x...::x...::.xx.....x.....:.x..:..:........x.:x.x:x:...x:x.............x..........:........x::....................................:...........:...........:....................x............................:.....:........:...x..........................:.......x.........................:............::............................................:.......:x......................................:.........x...x....x...............:...x:.....::.:.:..-..::..:....x.....:x.x..:.....x::xx..xx:...:..:x..:.:xxx.-:.......:.:------------..:...xx:::.:.-----------.::..x:....x:......x..:..:..---......:.:...::...x..:....:x.x....-------------------....------------------------------------------------------------------------.......::......-................x........:x.:...x.:..............:...::::...:.x..x:...:x..x.::..xx:x:...x....:.....x....:...:....::x..x..x....:...-x...::..x.....x..x.....:.:xx......:.:.....x.::.x:.---:..:..::.:-----:.x..x:..:::x:........:.. 15M8D17M1D22M1I32M1D11M4D40M4I54M5I471M1I56M1D11M12D14M11D28M3I33M19I4M72I15M1D130M1D50M3D10M5D25M 789/1038 76.0% 1143/94230402 0.0% 153/1038 14.7% 78459497 NA +3005 chr4 + 190214555 114996121 114996120 114996175 55 AATTGTAATCCCCATAATCTCCACATGTCAAGGGCAGGACCAGGTAGAGGTAATC chr4 - 94230402 13744843 13744842 13744897 80485506 80485505 80485560 55 AACTGTAATCCCTTTGGCCTCCATGCTTCAAGGACAAGACAAGGTAGAGGGAGTC ..:.........:x.:::.....:::x......:..:...x.........x.:.. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 101251278 88963277 +3123 chr4 + 190214555 115006035 115006034 115006084 50 AAAAAAAAAAAAAAAGAAGAAGAAGAAGGAGAGATAGAAAAAAGAGAGAG chr4 - 94230402 51684976 51684975 51685025 42545378 42545377 42545427 50 AAAAAAAAAAAAAAGGAGGAAGGAGAAAGAGGGATAAGTGAGAGTGAGAG ..............:..:....:....:...:....::x:.:..x..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 63321059 NA +3056 chr4 + 190214555 115033117 115033116 115033172 56 TTATATATATATGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTG chr4 - 94230402 42757853 42757852 42757908 51472495 51472494 51472550 56 TCATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTG .:....:.:..x..:.....:.:.x.......:.....x..:......::...x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 72275264 NA +3073 chr4 + 190214555 115033119 115033118 115033178 60 ATATATATATGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTGAAACAG chr4 - 94230402 8681930 8681929 8681989 85548414 85548413 85548473 60 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAG .....x....:.:...:...::.:.:.:...:.....xx.:............x:..x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 106351189 83863366 +3109 chr4 + 190214555 115033119 115033118 115033172 54 ATATATATATGTGTATATATATATATATATATATATATATTTTTTTTTTTTTTG chr4 - 94230402 71856863 71856862 71856916 22373487 22373486 22373540 54 ATGTATACATTTGCATGTTTATATATGTATGAAAATACATTTTTCTTTTTTTTG ..:....:..x..:..:.x.......:...:x.x...:......:......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 43176256 NA +4724 chr4 + 190214555 115050507 115050506 115050743 237 AATATTCATGGTATTTATGGGGAATTAAAACTTCTAGCTA-TGCTCCACAAGTGTGATTCTAGATTTCAAAGAAGTAATAACTTTGTTTTATGGGAAACTTTGTTTTCATCTTCAATAACAAATACAGTGGAATTATAGTTTGTAACATTCTTATCTTGCTTGGTTATTGTGTTCATGAATCTTAGCAGGTACAACTGGGAGGAAACAGGCACAGTTTGTGAGGTCGTAAAGAATTCA chr4 - 94230402 36541988 36541987 36542220 57688183 57688182 57688415 233 AATATTTACACCAGTGATGGGTAGCCTGTATTTCCTGATAATGTTTCC--AGCACGTTTCCAGTTAGAAGAGAGATAGCAGTGAAAGCATATGGGAAACCCTATTCCCTTTCCTAATAACAAATACAATGGAATTACACTTTATAATAACACAGACATATTTGTTTATGATGCACATAAATCTTGAGCTATGCTATATGGAAGATGCATGCAGAGCTTCT---ATATTAAAGAATTCA ......:.::x:.x.x.....x.:::x:x.:...:x.x..-..:.:.x--..:::.x...:..x.xxx.:...::..::.::xxx:x:x..........::.:..::.x.::::.............:........:.x...:...:.x:x:x:x.x.::...x....x:..:x...:......::xxx:.:.x.:xx...:..x:..x...x..:..x.---:.xx........... 40M1I7M2D170M3D15M 136/232 58.6% 233/94230402 0.0% 6/232 2.6% 78508519 NA +3119 chr4 + 190214555 115058944 115058943 115058999 56 TGGGAATAGCTGAAACTGTGGAAAGAGTTCTGAAGCTACACACACACACACACACA chr4 - 94230402 72585905 72585904 72585960 21644443 21644442 21644498 56 TGGGACAGGCAGGAACTTTGAAAACAGGCCTTTAGCTACACACACACACACACACA .....xx:..x.:....x..:...x..x:..xx....................... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 42473039 NA +63285 chr4 + 190214555 115076054 115076053 115077356 1303 CTTACCTTCACATCTTTGACATTCATCCTTGTTCCCTCTTTCCCAACAAATATATCATCAATGTCCACAAGGATGTACCTGTCCAAGGACAATGTCAGCCTCTTCCCTGACAAGAAGGAGATGGCATCTATGAAGATGAGCTTGTGCAGCCAAAAGTTCAAGTTGTTGCCAAAAAGTACTCTCTGAATTCCATCATGAAGCCCCAGATCCTGAATCACCGTTGCAAAGAGTGTTTTGCTAGACAAGGATGACAGGGATTTTTCTG----TCTGTAACTCAGTTAAAAGTACAGGCTGGTAGGTTGAATGATTATATTGGAAAATAGTCCAGTCTTCCCCAGGAAGAGGGCCTTTCTCAACCTTGGGGGCTTTGGTAATATGCAGCAAAGGAGATTGAGGGTTAACAAAACAGTCCTTTAGAGCTAGATTATTGAAAAGGTTTAACGGAAAGCCTTTTAATTGTGTACTTGGTAAGCTGTTCTCATTGGCTTTATGAAAACCGATTATACTAACACTGTATTCCACACAGTATTTTTCTAAAAGCTCTCGATTCCATGAGTCCATGCTGACATACTTCAGAATATTTTCATAAATAACTAAAGTATATTTCCCTTTGCCATTATCTGTAAGAGGAGGTATATCTCCCTTTCCAGGGGCAATAACCATGTGGTACTGAAATCGGCTGGACTCCAAAATAGCTATGATATCTTGACCGAGTTGAGAGTATTGGCTCTCCACGAAGAGAAGGACAGTAGGGTCCGTTTTGGATGTGTCAATAGGTTTAACTGTTTTCAGCTCCATTGACCTATATGGTAGAATTTTGATGTCAGTGCATTCTGCTTCTGCAGTGGTTTCAATAAGTGTCATTTCCTGTTTGTAGCCAGAGTAGAGAAAATAGGCAGAAATGACAATGCTCACCAAGCAAAAGGTAGCTAAGAGAACAATCAATGTTCGAAAACTTCTCCGAAGTTTCACAATAAGATTCATTTTTTAGAATAA--------TGTTTTGGAA-----GCTTTTTCCCAATTTCGTTTCCTAAAGTGCCATAGTGAATAAAGTATGAGATGTTGCAAATATCACTTCCCCAGAGTTCATGTAACCATCGCAAATCATGTAAAATGTT--TGAAGGGAGCACAACTGAGTTAAAGCTGGAAGGCAATAGATGGGAAGGATATACGTTGAGGAGATTTT----GAATATGTCCAATACTGAGAATTGCTGCAGAATCCTCTAAGCATAATCTGAAAGAGAGGAGAGATGTAATAACTAAGATAAAAATAGAAATATAAATATTTATTTCTATATAAATGCTGAT chr4 - 94230402 36556084 36556083 36557404 57672999 57672998 57674319 1321 CTTACCTTCACATCGTTGACATTCATCCTTGTTCCTTCTTTCCCAACAAAGATGTCATCAATGTCAACCAGAATGTATCTATCCAAGGACAGCGTGAGCTTCTTCCCTGACAGAAAAGAGATGGCATCAATAAAGATCAGTTTGTGCAACCAGAAGGTCAGGTTGTTTCCAAAAAGAACTCTCTGAATCCCATCGTGAAGCCCCAAGTCCTGGATTACAGTTGCATACAGAGCAGCCTTTGGCAATGCC-ATGGGGGTTGGCCTGGAAGTCTGCAGTTCAGTTAAAAGCACAGGTTGGTAGGTGGAATGGTTGAACTGGAAAACTGTCCAGTCTTCACCAGGCAGTGGGCCTTTCTCAGTCCTTGGTGCTTTGGTAATGCGCAGAAGCGGAGACTGATGGTTTACAACACAGTCTTTGAGGGCAATGTTATTGTAAAGTTGTAATGGCAAGCCTTTCAGTTTTGTACTTGGGGAGCTGTTCTCATTGGCTTTATGAAAACCAATTATGCTAACACTGTATTCCACGCAGTATTTTTCCAGAAGCTCTCTGTTCCACGAGTCCATGGATACATACTTCAAAATATTCTCATATATAATAATCGTGTATTTTCCTCTTCCGTTGTCTGTGAGAGGGGGAATATCTCCCTTGGCAGGTGCGATGACCATGTGGTATTGAAATCTGCTGGATTCAAGGATGGCTATGATGTCTTGTCCCAGCTGGGAGTACTGGCTTTCCACGAATAGAAGGATGATGGGATCAGTTTTAGATGGATCGATTGGCTTAGCTGTTTTCAGCTCCATGGACCTGTATGGTAAAAGCTTGAGATCTTCACACTCTGCTTCTCCAGTGGTTTCTGCAAGAGTCATCTCCTGCTTGTAGCCAGTGTACAGGTAATAGGCAGAAATGACAATACTTGCTATGCAGAAGGCAGCCAGGAGAATGACCAGTGTTCTGAAACTTCTTCGGAGCCTCACTATTAGATTCATCTTCTGTAGGACTTCCAACTTGACTTGGACTTGTTGCTTTTTGGTTTTTTC--TTTCTAAAGTGCCATAATAACAATGAGACGCAGAGGTGCCGATTCCTCTCCTGAGACGTTCATGTGACCATTGCAGTGCATTTATGAAGTTGCTGGGGAGATTATAAAGCTGTTGGAGAAGGAAATCAAAGGATCTGGAGAGCTAAATTGAAAGAGGCTTTCTGAGAATGCAGCAGTTGCCAATAATCAATGAAGAAAACTCTTAACATTATCTGCAACAAGTAAAAGA-AAAGTAAATAAAATTCATAAAGCAAT-TAAAAATGCATGTTAATAAAGACAGTGAT ..............x....................:..............x..:...........x..x..:.....:..:..........::..x...:............::..:...........x..:.....x..:.......:...:...x...:......x........x...........:.....:..........::.....:..:..x......x.x..x.:xx:x:.x.:...x.x:-.::...:..xx:...----....:.::...........:.....:........x.....:..:x.:.......:x...........x.....x..x............::.:.x..x...........::....x.:x.....:...x....x....x......:..x..:..x.x:......x....x.x...:..x........:.:..x.........x:............................:.....:.................:...........:.:........x:.....:.........xxx..........:......:.....x....:x.xx..:.....:...:.x..:..:.....:.....:..x...........xx....x..:..:...........:.......x......:..x.::..:........:.....x..x..:..:.....:.....:........x.......:::.:..:..x.....:....x:..:..x..:...:................x.....:.......:..x:....x:..xx::..:.........x..........x::...x.....:.....:..........x...x..:x...................:..::.:.x...:....:...:.:.....::.:..:.....x:........:..:..::....x..x........:..:.:x.:x.x--------..x:.....x-----.......xx:xx....--..:.............:.:.xx.x::x.:.x::x.x...x:..x:.x..:.:xx::x........:.....:...:xx...x..x:.x...--..::.:..x:.:..xxxx...::..xx....:x...x:...xx.:..:::xx.xx.x:.:...::...----....:::x.x:x.:.::.x...::x..x....xx....x.:...x.....x..x.::x:.:...-:x.:...x...:..xx.x.x..x...-....x..x:..x.:x...x.:.::x.... 249M1D15M4I730M8I10M5I16M2D91M2I68M4I64M1D26M1D29M 964/1298 74.3% 1321/94230402 0.0% 28/1298 2.2% 78519970 NA +3339 chr4 + 190214555 115108926 115108925 115108997 72 GCAAAAATGAATGGAAATAAAGGAAGGAGGGAAAAAGGGAGGAAGAAAGGAAAAAAGACAAGAGGAAGGTAG chr4 - 94230402 73368866 73368865 73368937 20861466 20861465 20861537 72 GCAGATAAAAATTAGAAGACAGGAAGGAGGGAAAAAGGGAGAGAAGGGAAAAAGATGACAAGAGGATGAAAG ...:.x.x:...x::..x.x.....................::.::::::...:.x..........x.:x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 41740060 NA +33258 chr4 + 190214555 115113425 115113424 115114240 816 AAATTAAGCAGTAACTTACCTAGAGAAGCATTTCAATATTTTGTCTTTTTCTAACTTGAATTTATCCCGTGTTAGAACATGAGATATCCAGTATTCAGGT----TCACTTGGCTCCAGGTTAATTAGAAGGAGCTTTCAGTTCATGCAATCTGCCTCAACAATATTCCAAGAGCACTC-TCTAGCTCCAGTCTTAGTGTCTGAACTCTTCCAGCAGAGTCC--TTTTATTTATACACACATTGTCCTTTTCAAAACAAGCAGCCAGCTGGAATGATTCAAACCTCTGTTCAGCACACCGTTAAAATGCAGCTTCCTTCTTGGACACGAGAATTACACCAGGGAGCAGACCGAGTACAGCAAAAAGGCTATGAGAACTATTTAATCACCGGAATACCAGCTGCTCCTGCTCTGCTGTTGCTAGTGCTGCTGTGCCTCTTGTTTAGCTGTAGTCGGTCTTTCCCTCCCTCCCTCTCTCTCACATCTCCAGAACTATAAAGGCAGCTTTGCCGGATTATGATTGGCAGAAACAGCCAATTCCTTCAGCTAATCATCCTCAAGACTTTCAAGGACCTGGAGCTGTTGTGATGTCATCCAGTCAGTGGGATGTTACACATGAATACATTCCAACAGAAGCTAATTCAGCGATGGGCTGCATTCCGCTCACACCGCGGTGATTGATTAGATGCTCCTTGAAGATTTGCATAATCTTTCATTGTACAGTTCGACTATTTCCTA--TGAAATTTGAGGATAGAATTCCACTTTGCAGC-TATGACACTGTTCCACGAGATTCTA---------TTGGACAAAATAAGAAAAGTTCAAAGCAGG chr4 - 94230402 36575050 36575049 36575829 57654574 57654573 57655353 780 AAGCTGAAGAATAGCTTACCTAGAGAAGAATTTC-----------TTTTCCTAGCGTG--------------CAGGAAA-GAGACATCTGCTATTCACATCTCCTCACGCGGCTCTAGGTAAGCTAGAGAGAGTTTTCAATTGATAGCAGCTGTCGGAGCAGCATCCCGGGAAGGCTCCTCTCGCTCCAGTCCCAGTGACTGAACTCTGCCGGCACAGTCACATCTCATTTATACACAGGCTGTCCTTTTCCAAACAAGCAGCCAGCTGGAACGATTCAAACCTCTGCTCAGCGCACCGTTAAAATGCAGCTTCCTTCTCGGACACGGGGATTACACCAGGGAGCAGCCGGAGCGCAGCGAAAAGGCTGCGAGAACTATTTAATCACCCGAATACCAGCTGCTCCTG--TTACTAGTGCCGCTGCCGCCGTGCCTCCTGTTC-GCCGGAGCCAG----------CCTCTCTCTGCCTCGTATCTCCACGAGTATCAGGGCGG-------------TGATTGGCAGGAGCAGCCCGTTCCTCC-GCTAATCAACCCCGAGACTTTCAAGGA-CTCGAGCTGCTCTGATGTCACGCCGGCGGGGGGATGCTTCACGCGAGGCCGCCGCCACGCAGGCTAACTCGGAGATGAGCCGCGTCCCTCCCGCGCCACCGTGATTGATTAGATGCTCCGGGAGGATCTGCATAATCTGTCATTGTGCGGTTGGTCCACCTCCTGCCCAAAATGCGGGAGGAAAACACCGC-TCGCAGCTTCTGATTTTACACCTGGAGCTTGCAGCTGAAAGCCTGGATaaaaaaaaaaaaaaaaaaagaaag ..::.:.:x.:..:..............x.....-----------....:...:.x..--------------:..:.x.-....:...::x......x:.----....x:.....:....x.::....::...:.....:..x..:xx.x...:.xx.:..::..:..::..:x:...-...x.........::....x.........x..:...x....x--.:.:...........x::..........x....................:..............:.....:.........................:.......:.:.................x.x...::....:........::..................x..................--:.:..:x...::x...:..:.......:....:-..:.x..:.:.----------....:....x:...::.......x:.x...x.:...:.-------------..........:.:.....x:.....:.-........x..:.:.............-..x......:.x........:x.x.x.:.x......:.x...::..:xx.:::x.x..:x.:.....:..:.x....:..:..:.:..x.:.:.:..:.x...................xx..:...:..........x.......:.:...x.x.:.::....:--::....x:.:.::x.:..:x..:.-.:.....-.x...:x:.::x..xx...x..x:.---------:....:....x..:....:xxx....x.:. 34M11D13M14D7M1D20M4I74M1I42M2I184M2D33M1D11M10D38M13D27M1D27M1D165M2I24M1D7M1I25M9I30M 567/761 74.5% 780/94230402 0.0% 74/761 9.7% 78538375 NA +11045 chr4 + 190214555 115119861 115119860 115120346 486 ACTCCGAAAACAGAGAT-ATTTTACAAAAGAAAACCA-----AACAAATA-ATTAAATATAATGTAAAATAAATAAAGTAAAATGAATTCTGATACTCTAAACCTACTATATAATAAAACAAT-GATGAATTTTTTTGTCAGCTCAGCTGTTTATACCTGTTAGAGGGTGGGAAAGAGCAAAGTAATTAAATTAAGAGGAAAGAAAAATCATGTGATGAACACAGGAGTGTATGAAAG------AATATACTTATCACCCTGCTAAAATATTCAATATTTTACAATATTCCCATAGAGGGCAATATTGTATAAAAGATGG----------TGAATGAAGACTCTGCCAATTCATCTCTGTTGATATGCTTTAAAGAAAACTGCTGTTACCATAAATTTGGAGCTCCACTTCCCC----TCAAACT----CTAATATATAAACTGATGCACACAAAAACATAACACAGAGTCTCATCAAAGGCAAAGAAAATTAATTTGGT--ATCACTTACTGGTAGATT chr4 - 94230402 36583975 36583974 36584446 57645957 57645956 57646428 472 ACTCTGTTAACTGAAATTATCTTATAAAAGCAAAATACCAGTAATAGATATATTTATTACAATATGATATG--TAGGCTTGAAAGAA-----ATAGATTAAAT------GATAGTAGGGTAATTGGTTGATTTTTCTG---------ATGCATAAAGCTTTTA-----TGGTAAAAAGAAAAGCATTTTAA-----------GACAGATATTATGCTAAAAATGTAAAAAGACGAAAGCACAGCAGCATGCTTAT-----TTCAAATCTGTTACATATTGTGC-----TCCCATAGAGGGCAATATTGTATAAAAGATAGGTTTAAGCTACATATTAGAGATCTGCCAATTCATCTGTGTTGATATACTTTAAGGAAAATTGCTGTTACGATAAATTTGATGCCGCATTTCCCTTTAGTCAGGCTATGACTAATACACATAATAATGCACACAAAACCACATAACAGAACCTCGTTAAAGATGAAGGAAATTAATTTTGTAGATTACCAAATTGTAGGTT ....:.xx...x..:..-..:...:.....x...x:.-----..:.:...-...x.x..:...:.:.x..:--..::x.x:..x...-----...xx:....:------x...:..::::...-.:.x:......:..---------x..:x..x.x..x...-----...x...:..x....:.x..x..-----------..x.:..xx.:..x.:..x.::x:.:x:x.:.....------.::..:.....-----.x.x..xx.:..xx.....x.:.-----..............................:.----------::x..x.:::x...............x.........:......:.....:.........x.........:x..:x..:.....:----...::..----......:.:.x.x.:............x..:.xx.....::...:.:....:::...:..........x..--..:..:x.x.x....:.. 17M1I19M5I8M1I20M2D14M5D11M6D14M1I14M9D16M5D23M11D36M6I11M5D23M5D32M10I84M4I7M4I71M2I18M 312/438 71.2% 472/94230402 0.0% 82/438 18.7% 78535886 NA +3081 chr4 + 190214555 115125755 115125754 115125854 100 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAACGCTCTTACGCCTCATTAAAAAACCTACCTCATACAATACAAATGAAGAT-ATTGAATTACA chr4 - 94230402 19457556 19457555 19457656 74772747 74772746 74772847 101 AAAAAAAAAAAAAAAAAAAGTACACAAATATAAAGGTGCATTCCCCATGCCTCTTCCAAATGCCCAAGTCTTACAATTTCAATGAAAATGGTTCAATTCCA ...................:x.x.x...x.x...:x.:xxx::.::.:.....x.:x...x:..:.xx..x......x:x......:..-:..x....x.. 89M1I11M 67/100 67.0% 101/94230402 0.0% 1/100 1.0% 95668199 NA +3421 chr4 + 190214555 115170566 115170565 115170684 119 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAACTGCATCCATCTTCAAATTATATAAGCATTTTCATCCACTTTCTATTACCTCAGCAGCTATTACTCTGTTTCAAGTCATTATTAGGTCT chr4 - 94230402 21325747 21325746 21325842 72904561 72904560 72904656 96 CTTAAAAGAAAAAAAAAAAAAAAAGAACATCTGCAAAAATCTACAAATAATAAAAGCAGAT------------TGCTACTCTTGCAGCTAGCAC-----------TCGCTACTAGGTCT ..:....:................:..x.x.....xxx....x.....x...x.....xx.------------.::...:::x.......x:..-----------..::..:....... 61M12D21M11D14M 72/96 75.0% 96/94230402 0.0% 23/96 24.0% 93844819 NA +3018 chr4 + 190214555 115203102 115203101 115203155 54 TCTGTTGTTCTTTGCTTCTTTCCTTTCTCCCTTCTTTCTCCCCTTCCCTCTTCT chr4 - 94230402 44738063 44738062 44738116 49492287 49492286 49492340 54 TCAGTTAGTCTTTGCTGATTTTCCTCCTCCTTCCTTTTTCCCTTTCCCTTCTCT ..x...:x........xx...:.:.:....:.:....:....:......::... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 70465039 NA +3001 chr4 + 190214555 115208484 115208483 115208558 75 AAGAGCTCATGACCAAGAACCCAAAAGCAAATGCAACAACAACAAAAAAATAGATGAGGCCAGGCACGGTGGCTC chr4 - 94230402 27961298 27961297 27961372 66269031 66269030 66269105 75 AAAAACAAACAAACAAAAACCCCAAACCCAACAAAACAACAACAAACAAACAGATAACGATAGGCAGGATGCTTC ..:.:.xx.::.x...:.....x...x.x..::x............x...:....:.x.x:.....x.:..x:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 87247186 NA +3042 chr4 + 190214555 115229847 115229846 115229921 75 AATACCAATAATAATAATAATAATAATAATAATAATAATAATAATAACAAGAAAAAAAACCCAAAAAACAAAAAA chr4 - 94230402 75135094 75135093 75135168 19095235 19095234 19095309 75 AATACTGAGAGGATAAGAAGGAATGATAATAATAATAATAGTGAAAAGACAAAAAACAAACAAAAAACCAAAAAA .....::.x.:x.xx.:x.:x...:...............:.:.x..x.x:.....x..x.x.....x....... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 40094753 NA +3122 chr4 + 190214555 115229871 115229870 115229922 52 AATAATAATAATAATAATAATAACAAGAAAAAAAAC--CCAAAAAACAAAAAAA chr4 - 94230402 75135115 75135114 75135168 19095235 19095234 19095288 54 AATGATAATAATAATAATAGTGAAAAGACAAAAAACAAACAAAAAACCAAAAAA ...:...............:.:.x....x.......--x........x...... 36M2I16M 45/52 86.5% 54/94230402 0.0% 2/52 3.8% 40094756 NA +15010 chr4 + 190214555 115239738 115239737 115240135 398 TTTTCTTACAAGATGCATTTCTAAGGTC--ACAGT-CTTAAAATAAGCTCTTTCTACTAGATT-AAATATAACTTTTAATTGTAGTGGCATTCATACAGTATCTCTAATCAGAACTGTATCTTAGGTTTATACAAATGT-GCTCTAAACATGCAGCTTTAACCTCTACTGATTTCAAGGACCCTGTCATTATGCCATTTTCCAGGGTGAGGTGATTTCTAATTACTGCACATCCTGATGTTTAATTTCATGTGATAAGCTAGAAACTAATAAATGAATGGTGCTGTTTATCTCCAAGGACACACTAATTTGAATAGAATGGCAG----GAAAAAAAAACACTTAAGAAATGAC-------------------AAACGTGAATTTCACA-AACAAGATATATACTTAACTGGGGTTTATCTGTAATTT chr4 - 94230402 36607757 36607756 36608180 57622223 57622222 57622646 424 TTTATTTGCTGGATACGTTTGTGAGGCCTTGCGGTGCTCAAAATAAACCTGTTCCTTCAGATTTAAATATAACTTTTAATTGTTATGTAGCTGATACAATATC-CTAATCAGCATCTTATCTGTGGTTTATAGAAACGTTGTTATAAACATGCAGCTTTAACCTTCATTGATTTCAAGGACTCTGTCATTATCCCATTTTCCAGAGCGAAGTGATTTGTAATTACTGAGTATTCTCATGTTTAATTTGATGTGATAAACCTGAAACTAATAGATAAGAGGGCTCACTTCATTCCGAGACCAAAATAATTTGTAGAAAACAAAAAAGATGGAGAAAAGACAGTCAA-AAGTAACGTCTGCAGGCAGTACCTAGAAACATATAGTTCACGTAGCAGAATATCATTTTAAC-AAGGCTCATCTACAGTTT ...x:..:.x:...:.:...x.:...:.--:.:..-..:.......:.::x...:x::.....-...................x:..xx::.x.....:....-........x.::x.....xx........x...:..-.:.x....................::.:.............:..........x...........:.:..:.......x.........x::..:..x...........x.........:.:x..........:..:.:x..xx::::..xx:...:..:x..x.x.......x.x.:..:::x.:----.:.:....:...x.:..-..:.:..-------------------....:.:x.x.....:-.:..::....xxx:.....-::..:.:....::.:... 28M2I5M1I27M1I39M1D35M1I184M4I17M1D7M19I16M1I19M1D18M 286/395 72.4% 424/94230402 0.0% 32/395 8.1% 78631981 NA +8961 chr4 + 190214555 115240973 115240972 115241210 238 CATTTTGCGGCTCATGGAAAGCTGAAAAATCAA------TAGCTTCAGGTTGATGAAACCTAAATCCATTTGATTCCTTTCCACCATTGCCATTATGCAGACAGTCAAGTGTGATGTATTTAGTTCATGCAGTACTTATTACTCTCAAGCACAGCTTCTCATCAGGGAAAAATTAGACCAGATGAGAAGTAATCAAGAAATTCTGGAGAGGTTTCAAAGATCTTCCTTCTAACTGCTTCCTTAA chr4 - 94230402 36608499 36608498 36608736 57621667 57621666 57621904 238 CATTTTGGAACACATGCA---TTAAATAATGAACTCTGTTAAATCAGAGTTTGTGTAACCTAATTCTATCTGGTTCCCATTCACCACTGCCATTAGAAAGGCAGTCAAGTGTCATGTACTTAGCTCGTGCAGCACTTGTTACTCCTGAGTGCAGATTATCATCAGTGAAAAATAAAGCCAGATGAACAACAATCAAACCATT-TGCAGGAGTT--AAAAATTTCCTTTTTCTTTATCCTCTTAA .......x::.x....x.---:.:..x...x..------..:x.:x::...x:..x.......x..:..:..:....:x.:.....:........x:x..:...........x.....:....:..:.....:....:......:::..::...x..x.......x.......x.::........:x.::......:xx...-..x..::...--...:..:.:.:..:.xx:.:::::..... 18M3D12M6I163M1D10M2D29M 162/232 69.8% 238/94230402 0.0% 12/232 5.2% 78632474 NA +3115 chr4 + 190214555 115241173 115241172 115241242 70 AGAGGTTTCAAAGATCTTCCTTCTAACTGCTTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTC chr4 - 94230402 29014527 29014526 29014596 65215807 65215806 65215876 70 AGCAGCGTTAAAGTCCTCCATCTTCACTACTCACTTAAAAAAAGAAAAAATAAAAAAAGTAGATAAAGTC ..x:.:x.:....x:..:.x.::.x...:..:x..........:......x.......:x.:.x...... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 86226646 NA +3068 chr4 + 190214555 115254129 115254128 115254189 61 TAACACACACACACACACACACAAAAGGAAGACATGACAGCCATGTGCGGTGATGGGTATG chr4 - 94230402 44276967 44276966 44277027 49953376 49953375 49953436 61 TAACTTACACACACACACACACAAAAAAAAAAAACACCAGCATTTTCCAGTGATGGGAGTG ....x:....................::..:.x.::x....xx.x.x.:........x:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 70977162 NA +3016 chr4 + 190214555 115254212 115254211 115254262 51 TTGTTTTACAATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 19559277 19559276 19559327 74671076 74671075 74671126 51 TTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ..x...x:.x..x.x.x.x..............................:. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 95694935 NA +3145 chr4 + 190214555 115254215 115254214 115254269 55 TTTTACAATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 9151839 9151838 9151893 85078510 85078509 85078564 55 TCTTTCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .:..x.....:x.x.xx..............:........x....x.:....... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 106102376 84112179 +3064 chr4 + 190214555 115254221 115254220 115254264 44 AATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821278 89821277 89821321 4409082 4409081 4409125 44 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..x:.........x.x.......................:..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 25432943 NA +3096 chr4 + 190214555 115254221 115254220 115254262 42 AATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821280 89821279 89821321 4409082 4409081 4409123 42 AATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ...........x.x.........:.............:..:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 25432941 NA +3530 chr4 + 190214555 115289671 115289670 115289720 50 TTTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 18982301 18982300 18982350 75248053 75248052 75248102 50 tctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG .:.....x.x.x.x..................x................. 50M 44/50 88.0% 50/94230402 0.0% 0/50 0.0% 96307370 93907185 +3519 chr4 + 190214555 115289671 115289670 115289720 50 TTTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 18982299 18982298 18982348 75248055 75248054 75248104 50 tctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG .:.....x.x.x.x.x.................................. 50M 44/50 88.0% 50/94230402 0.0% 0/50 0.0% 96307372 93907183 +3262 chr4 + 190214555 115289685 115289684 115289723 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGTGT chr4 - 94230402 81629064 81629063 81629102 12601301 12601300 12601339 39 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGT ..........:.......x.................:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 33660621 NA +3262 chr4 + 190214555 115289687 115289686 115289725 39 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGTGTGT chr4 - 94230402 81629064 81629063 81629102 12601301 12601300 12601339 39 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGT ..........:.......................x.:.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 33660623 NA +21046 chr4 + 190214555 115291595 115291594 115292098 504 TTGTCCA-ATCTCAATTAATACTTAATTTTCAAGGCCAGCAAATTCATGACAAATTTATTTTTTGAACAAAGCATCACACCAAATAATGAAGCCAAAACTGATTT-------------TTTTTTCAACTGTATTAAGTGTAAGGAAATCCAAATAGCACAG-TGATCACTGTACATTTGTATGTTAATGTTGTCAGGTAAGCATCTTGAAAGACTGGGAATGATTAACGTGTTTGAGCATAAACCAGAGAAAATGTTCAACATTTGATAGAGACAGAAACATTTAGGAAAATGCAAAAACATCTGCCTAGGAAACTGTTTTCCGAACATTGAAAATTATAAGCAATTATCAAGAATTTTACCTGCATATACTCATAACTCTGACTTAGTGACAGCTTAACTGGTATTAAGCTTCA---------------ATTTTAGCACGAAGATTTTGGGATAATCACCATGTGCCTATAATTTACACTGCT---TCTTTATACATGCT-------AAAAACATTTCAGCAATATATTTTTAAGAGGGTAAT chr4 - 94230402 36631682 36631681 36632215 57598188 57598187 57598721 534 TTTTCCATATTTTGATTAATACTTAATTTTCATAGAATATGAATTCATGATAATTTCATTTTTGCAGTAGA-CATCATGCAAGTTGA--AAG---AAACTGATTTATTTCTTTTATGATTTTTTTCCTTGTGTAAAATGCCAGGAATTCTGAAAAGCAGAGATAATCAGTGTACATTTGTATGTTAATGTCACCAGGTAATCGTCTTGAAAGACTGAATATGATTAACACTTTGAATCATAAATTAGAGAAAATGTATGACACTTGACAGGGAGTGAAATATCTAATACAGTATGAAAACATCTGGCCAGGAAATTGTTTTCCAAACATTGGAAATTATAAGCAATTATCAAGTATTTTACCTGACTATACTCATAACTCTATTTTAGTGACACTTTAACTGATATTATGCTTCATTTCTCAGCCATCTGATTTTTGTAT---AATTTTTGTATAATCACCCTAGATCTATGATTTACACTCTTTCATCTTTCTGCTTGATGTGCATAGCGAATATTTCTGTCATGTA-CATTAAGGGGGCAAT ..x....-..:.::..................x:.xxx:::.........:..x..:......xx.::.:.-.....::.x.:x.:.--...---..........-------------......:xx:...:.x..:..:x.....x..::..x....x..-.:....x.....................:::.......x.:.............::x.........::x..x:.x......::...........x::...:....:..:..xx....:..:..:x.x.:.:::..........x.:......:........:.......:.....................x..........xx...............:x:.........x:.......:.....x......---------------.....x.:.:---:.....x.x.........x.:x::....:.........x:.---.....x.:.x..x.-------:x:..:.....x.:x..:..-:x.....:...:... 7M1I63M1D15M2D3M3D10M13I43M1I253M15I10M3D41M3I14M7I20M1D15M 374/494 75.7% 534/94230402 0.0% 50/494 10.1% 78659913 NA +3765 chr4 + 190214555 115314168 115314167 115314318 151 ATTATTCACAATAGTCAAGGTATGAAATCAACCTATGTGTCCATGGAGGAATGAATG--------CATAAAGAAAATGTGTATATGTATATATATAT-----------ATATATATATACACACACACACACACATACATACAGCCACACATATACACACACACACAATG chr4 - 94230402 14964723 14964722 14964886 79265517 79265516 79265680 164 ATTACTCATAA------ATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTG ....:...:..------.x....:..xx...x:xx..x.:x.x.:x..:....x..x--------..x....:x..x...:..x.:....x.x:.:.-----------....:.x.:::::::.....::::.::..:.............:..:............x.. 11M6D40M8I32M11I62M 96/145 66.2% 164/94230402 0.0% 25/145 17.2% 100349445 89865110 +3033 chr4 + 190214555 115314208 115314207 115314285 78 CCATGGAGGAATGAATGCATAAAGAAAATGTGTATATGTATATATATATATATATATATACACACACACACACACATA chr4 - 94230402 80747782 80747781 80747859 13482544 13482543 13482621 78 CCTTGAACAGATAACTGTACTGCAAGCATGTGTATAGCTATGCATACATACGCAACTATACATACATACACACACATA ..x..:.x::..:.x..:.:x:x:.:x.........xx...::...:...:::.xx......:...:........... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 34566426 NA +3406 chr4 + 190214555 115314208 115314207 115314289 82 CCATGGAGGAATGAATGCATAAAGAAAATGTGTATATGTATATATATATATATATATATACACACACACACACACATACATA chr4 - 94230402 8395786 8395785 8395862 85834541 85834540 85834617 77 CCATGTGTGTATGTGTGCATAAACA-----TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....x:x.x...x:........x.-----.....x.::....:...::x..:..xx...................x...:. 25M5D52M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 106918422 83296133 +3206 chr4 + 190214555 115314218 115314217 115314309 92 ATGAATGCATAAAGAAAATG--------TGTATATGTAT--ATATATATATATATATATACACACACACACACACATACATACAGCCACACATATACACACA chr4 - 94230402 4481651 4481650 4481752 89748651 89748650 89748752 102 ATGAGTGTCCGATAAAAATGACAGGGACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ....:..:x::.x:......--------.....:...x.--.....x:.:.:.:...:.:....x...:.....:x:......xx:x...:....::..... 20M8I11M2I61M 64/92 69.6% 102/94230402 0.0% 10/92 10.9% 110832567 79381988 +3297 chr4 + 190214555 115314244 115314243 115314349 106 TGTATATATATATATATATATATACACACACACACACACATACATACAGCCACACATATACACACACACACAATGAAATACTGTTCATCTTTTAAAAAGAAGGAAA chr4 - 94230402 66904840 66904839 66904940 27325463 27325462 27325563 101 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTT-----CCTCTCAGCTCTAAATGAGAAAGAGA ...x.x:......:..::..:.:.....:.............:x..x:x:..x:::......xx..:..:..x.x-----.:x:...x..:.x..x:....:..:. 75M5D26M 66/101 65.3% 101/94230402 0.0% 5/101 5.0% 48409404 NA +22343 chr4 + 190214555 115316076 115316075 115316673 598 AATTGTATTTATTATATTTTTGTTTTCTCTATCCA--CTTTCACCTGAAAAGTCATCTTTGTTATTAATTTAATTTAAAAGCCTTATATTCTTTGA-AGAGTAGCTAAGTAGATGCTCAAACTTAATTCTTTTAAAGGTGTTATAAACAACCTTGTATTATGCTGATTGAATATATTGGATGCTACTTTT-AATTTAAAAGAAATTAAAGTACT-TCTAATGTGTATGGTGGCCAATTTGCAATTATGATCTCCATGATGAGATTCTTCCAGGAAATGAGAGGTGCATTATAATATAAATGGAGTTGTAGATATGGTTGATTTTAATTTGTGACCTAGAGGTCAATAGTTATTGGGTGTAATAACGCTCTAGTAATGGGGAAATTCAAGGCACATTTGTATAACAAGAAATCATAACTAGTTATAGTTCAAGATGATGATTCTTCTT--TTTGCCATTCTGATCTGCTGGGACTCT----GACTTAGTTTTATAGACTTCATACTTCTAGTATTTAAGATATAATTTTACTAGACAAAGTTAT-AAGTT------AGTCTTTGATTTATAATAAAGTTTA----------TAATATCCA--------CTATATTCAATGCAGTATTCTTTTATA chr4 - 94230402 36639848 36639847 36640468 57589935 57589934 57590555 621 AACTTTGCTTCTGGTATTTTTGCTTCCCCCACCCAGGATATTATCTTAAAACGTATCAAGAATTTTTATACAAATTAGCAACTTATTTTTCTATAACAGAAAAGTTGAAGACAAACTAAAACTAGAG-CTTCCCAAAATGTTATAATCACCCTTATGGTATGCTGATGGGGTAGAAGAAATGCTACTTTTTAATTTAAAATAAATCCAACTTCTGCCTAATGTGTATGGTGGGCAATTTGCAATTATGATCTTCATGATGAGATTCTTCCATGAAATGAGAGGTGTATTATAATTTAAATAGAGTTGTAGATCTGGTTGATTTTAATTTGTGACCCAGGGGTCAGTAGTTATTGGGTGTAATAACCCTCTGGTAATGTGACTCTTCAAGGCACATTTGTATAATGAGAAATCATAACTCGTTATAG-GAAGTATGATGATATTTTTTGCTTTGCTATTCAGATATGCTG---TTCTACCAGTCTCCATTTTATATGCTTAAAATTCC----AGTTAACATGT--TTTTGCTATAAAAATCTGTGAAGCTGTTAGCAGCTTACGATTTAC--TGAAGTTCACATGCTTCTTCAGTTTTCAGTAGGGAGCTATATTCCATTGCTTATTCTTTTCTA ..:.x.::..x.x:........:..:.:.:.:...--x.x.:.:..x....xx:...xxx:x.x..x..x:..x...:x.:.:.xx.x....x.:.-...:x..:.:.:x.x.x:..x.....x:.x-...::x..::........x..x....:.:x.........x.::..x.xx::...........-.........x....:x..x.x..-:................x...................:..................x.............:........x.....:...........x......................:..:.....:....................x....:......x.:xxx....................::.............x.......-xx.:x........x:..:..--.....:....x...x.....---:...----.x..:x:.......x:...x.x.:.:.----.x....x..:.--....:...x.x...x:.:.-...:.------..::.x:......:--.:.....:.----------:.:.x.:..--------........x..xxxx.........x.. 35M2I59M1I30M1D62M1I23M1I211M1D20M2I20M3D4M4I27M4D11M2D19M1I5M6I14M2D9M10I9M8I27M 441/585 75.4% 621/94230402 0.0% 49/585 8.4% 78676228 NA +3038 chr4 + 190214555 115322145 115322144 115322218 74 AAAGAAAAAAGAAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGGAGGAGAAGAAGGAGGAGGAGGAGGAGGAGAA chr4 - 94230402 40472546 40472545 40472619 53757784 53757783 53757857 74 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ...:....:.:...:.:...:..:......::.::..:.::..:.:xxx.::...x.:.::..:x...:..... 74M 46/74 62.2% 74/94230402 0.0% 0/74 0.0% 74849599 NA +3070 chr4 + 190214555 115322188 115322187 115322270 83 AGGAGAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAGGAAGAGGAAG chr4 - 94230402 49393628 49393627 49393710 44836693 44836692 44836775 83 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAG ....x:.xx..:.x.:.....x.....xxxxx...:x::...xx.......x.:.x:x.......:............:.:.. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 65928560 NA +3115 chr4 + 190214555 115333572 115333571 115333632 61 TGATTATTCCCACCTTCATTTCATGGATGAAGAAACTGAGGCACAGTGAGGTTAAGTAATG chr4 - 94230402 83892763 83892762 83892823 10337580 10337579 10337640 61 TAAGTATTACTGCTTCTAGTTCATGCATGAATAAACTGAAGCATAATGAGGTTATGAAATG .:.x....x.::.:.::.x......x.....x.......:...:.:........x.x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 31440809 NA +3200 chr4 + 190214555 115333590 115333589 115333662 73 TTTCATGGATGAAGAAACTGAGGCACAGTGAGGTTAAGTAATGGCTGGCAGTCATCCAACTAGTTTGTGGCAG chr4 - 94230402 73089461 73089460 73089533 21140870 21140869 21140942 73 TTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAACACTCAGAAGCCACCCAGCAAGTCCTCTGCAG ...::.:...x.:....x................x..:...::x:::.x..:..:...:.x...::x:x.... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 42244129 NA +19091 chr4 + 190214555 115369237 115369236 115369719 483 TGTTTTCAGAAATA-ACTTTTTAATTATATGACATATTTCCCATTGATTAACT-------TAAAATGTGAGTAATGAGTTCTAAATTAGATAT-TGGTATCCTTCAGGCTAGTAGTTTTTCTAAGCATAAAATTCTATTGAACCTGTGTCTGGCTTACT-GTACATGAGAATAGAGTGCAATCCATTATCAGG-GAAGGCAAAGCCATTAGACTCCTCATGCATTCAATTAGGCTATTACTTTATCTATCTTAATTGATACTGCTAATAGTATCATATATAATTGCTCTACATAGA-AGAAAATGTGCTTGTTAATGAGTCTTGGCTAATTCAAAGAATGACATTTAAATACTACTAGTAAAACTGTACATAGGTCCAAAATCAATATGTGAC--CTCTCCTTAGTCTTACAGCAGGTGGTGGAAAACAGTAATTTAAATTGGTTGATGATAATTTAAAATGAATTCCAGTGTATTTCAGTATGTTTTCAGGTCAAT chr4 - 94230402 36659258 36659257 36659742 57570661 57570660 57571145 485 TGTCTCTGAAAACATACTTTTTTTCCCCACAATGTATTTATTATTCCTTGATGAGAATAAGAAAGCCTGAGCAATGATTCTTAAATTAGATATCTGTTATGCTCCAGGCAAGGAGGTTTTCTAAGCAGAAGAAACTATTGATCCCATGTCTGACTTAATAGTACATGACTACAGAGTGCCATCCATTATAAGATGAAAGAAAGACCATTAGCCTCCTCAAGCATTCAATTATACTATTACTTTATCTACCTTAATTGATGCAGCTAATAGTATCATATTTAATTGTTCCATATAGGTGGAAAACATGCTTGTTAATGAGTCTCAACTAATTCACAGAATGACATTTAAGCAATAGCAGCAGAGCTGTAGGTGGGTTCCTGATCAGTGTGTGATAGATCACATTATTCCT-------TTGCTGTGA-----TAGTTGAAAATGGTTCATGTTTGCTTCAGATGAATTCCTGTGTGTGCGAGCTCAGTTGCAGAGCAAT ...:.::::...:.-.......xx::x:.::.::.....x::...xx..:.:x-------x...::x....:.....x.::............-..x...x..:.....x..x..x...........x..:.xx.......x..::......:....x.-........xx.:.......x.........x..:-...:.x..::.......x.......x...........x:...............:..........:.x................x......:..:.:....:-:.....::.................:::........x..............::.x..x:..:.:.:.....x:.:...:.xx:....:.:.....:--x..x.x...x..:.-------x..x..x:.-----..:..x...x.....x...x.x::..x.:.........x....:.x:x..:x::x..x...:x.... 14M1I38M7I33M1I65M1I33M1I102M1I96M2I14M7D9M5D67M 345/471 73.2% 485/94230402 0.0% 26/471 5.5% 78709979 NA +10946 chr4 + 190214555 115370763 115370762 115371148 386 CTTTATACATGTTATCAAGTATTTCTACTAGTTCTTCCCAATGGAAACCACGAACAGCCTACAGCATTTTTACTGACTTTCACTCTCTGAACAGTTATTTTGCTACTAGACTGGAAAATGAGTGAAGAAAAAATTGGCAAAAAAGGGCATATCTCTATTTTCCAGCTCAGTAAGATTCTCTAAATGTGACATAAATTCTAAGTGGTACAGCATATAATATTTGAAGAGTGCTGTGGACTTGAACACTAGATATGTCTGTTTCTTTTT---------ACAGATAAAAAAAATTGAAAACATAGAGGACATTTCAAACTTT--------ATTGCAAAATCACAAATATGTAATTATC---CTACAGCTATTCTTTGTTTTGTTCAGAACAGATTGATAATTGAATAAC chr4 - 94230402 36662322 36662321 36662699 57567704 57567703 57568081 378 CTTCATATATTTTATTGAAAATTACTGTCAATTTGTACCACAGG----TACAAA------ACTGC-TTTTTATTGTGTATAAAATTTAAAGTAGG-ATTATATTACGTGACTAGAAAATAACTGAAGAACAAATTAGAAAAG-------TCCCTTTATTTTCCAGCTCAATAACAT-CTTTAACTGGTACATAAATTTTAAACTGCACAGCATGTAATATTTGAAAAGCTCTTTTGACTTGAACAGGAGATAAGTGTTTTTGGTTTCTGCGTTGCCACAGTT--------TTGAAAGTCTAAGGGACATTTCAAATAATGAAGTGGCAGCGCTAAACCGTGAGAATGTAATTATTTTTCTACAGCTATTGTTAGCTTCACTTTGAACAGTTTGATAATTGAATAAC ...:...:..x....::.:x...x..:::.:..:x.x...xx..----:..:..------..x..-......:..xx.x.x.xx:.:x:.::..x-...x.::...xx....:......:.x.......x.....:.x...:-------.x:..:..............:...x..-..:...x..xx.........:...::x.:.......:...........:..:x..x.x..........xx.....x..x.x...xx...:---------....x.--------......::x..::............:xx.--------.x:..x...:.:::.:x..........:---...........x..x.:..:::.:x......x................ 44M4D6M6D5M1D29M1D46M7D27M1D90M9I6M8D29M8I28M3I48M 256/358 71.5% 378/94230402 0.0% 48/358 13.4% 78708441 NA +3142 chr4 + 190214555 115401502 115401501 115401556 55 AGGGAAAGGAAAAAAAAAGTTTAAAGTGCATTTTGACGTTGAGTTGCCCGGTTAC chr4 - 94230402 4620893 4620892 4620947 89609456 89609455 89609510 55 AAGGAAAGGAAAAAATATGGTTAAATTGCATCTTGTCATTGAATTGCTTTGTTAC .:.............x.x.x.....x.....:...x.:....:....::x..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 110780609 79433946 +3006 chr4 + 190214555 115406267 115406266 115406337 71 CCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCGTGCCCAGCCTATATTTTCTTAAATTGTCTCTTTT chr4 - 94230402 59799605 59799604 59799675 34430728 34430727 34430798 71 CCCCCCATGGAATTAGAATTACAGGTGTGAACCACCTTGACAATGAAATTCTTCCCTAAATTGTCTTTGTT ..:....x:.x::.:..........:....:.....x..x.x.xxxx..x:..:.:..........:.x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 55606662 NA +3333 chr4 + 190214555 115410558 115410557 115410623 66 TAAATACATATATATATATAGAGAGAGAGAGAGAGAGAAAGAGAGAGA------GAGAGAGAGAGACAGACA chr4 - 94230402 89611996 89611995 89612067 4618336 4618335 4618407 72 TATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAGCCA ..x...x.x......::....:x..............:........x.------:...:...:.:....x.. 48M6I18M 52/66 78.8% 72/94230402 0.0% 6/66 9.1% 25798562 NA +3486 chr4 + 190214555 115412338 115412337 115412433 96 GAAGCAAGAGACCCAATTCTCACTGGAAAGTATAGAAAGACTATAACAAGTAATAAGTATATAGAAAGTAAGTAAAAACAAACAAACAAACAAAAA chr4 - 94230402 17435979 17435978 17436061 76794342 76794341 76794424 83 GGAGCAAGGTAAACAG--CTCACTGGGAAACACAGAGCG-----------CATTAGTTATATTGGGAGTAAATAAAAACAAACAAACAAACAAAAA .:......:x.xx..:--........:..::.:...:x.-----------:.x..:x.....x.::.....:........................ 16M2D21M11D46M 63/83 75.9% 83/94230402 0.0% 13/83 15.7% 97976359 92238196 +3093 chr4 + 190214555 115459966 115459965 115460041 76 AACTAATATATATGGGAGTATATATATATATATATATATATATATATATATACACACACACACACACATATATACA chr4 - 94230402 10572821 10572820 10572895 83657508 83657507 83657582 75 AGCCCATATCCATAGCATTTCTTAAATATATATAGAGAAATATATATATATGCACACACAGACAGACAT-CATACA .:.:x....x:..:.x.x.x:x..x.........x.x.x............:........x...x....-:..... 69M1D6M 56/75 74.7% 75/94230402 0.0% 1/75 1.3% 104887145 85327410 +3230 chr4 + 190214555 115459972 115459971 115460050 79 TATATATGGGAGTATATATATATATATATATATATATATATAT--ATACACACACACACACACATATATACACATATATAA chr4 - 94230402 8395793 8395792 8395873 85834530 85834529 85834610 81 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA .:...:..x.x:..x.:..:...x..:....:...::x..:..--...................x.:.:.x.::x...x.. 43M2I36M 56/79 70.9% 81/94230402 0.0% 2/79 2.5% 107064179 83150376 +3715 chr4 + 190214555 115459972 115459971 115460056 85 TATATATGGGAGTATATATATATATATATATATATATATATATATACACACACACACACACATATATACACATATATAATAAAAA chr4 - 94230402 8395791 8395790 8395874 85834529 85834528 85834612 84 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG-AATAAAAA .:.:....x.x.:...x.:..:...x..:....:...::x..:..xx.:.............:.:.x.....x..:-........ 76M1D8M 61/84 72.6% 84/94230402 0.0% 1/84 1.2% 107064181 83150374 +3088 chr4 + 190214555 115460788 115460787 115460844 57 ATAACTGCGTTGTGCTTTTCTTCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 90371267 90371266 90371323 3859080 3859079 3859136 57 ACAACTGCAATGTGATGCTCATCCTTTTTCTTTTTTTTTTTTTTCCCTTCCTTCTTG .:......:x....x.x:..x......:.:..............:::..::..:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 25089521 NA +3034 chr4 + 190214555 115501630 115501629 115501699 70 CTTTCCCATTATATCCGTATGGAACTCAGAAATTTCTTGGCTGTGTAAATTAATTTTTGAACATTTCAGT chr4 - 94230402 4320277 4320276 4320346 89910057 89910056 89910126 70 CTTTCACATCATCTAATAATGGAAATCAGAAATTTCTTGCCTGTGATGATTATTATCTGAATATTACGAT .....x...:..x.xxxx......x..............x.....xx:....x.x.:....:...x.::. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 111181353 79033202 +3546 chr4 + 190214555 115527930 115527929 115528138 209 TTTCTTGAATTTATTTGTAGT------TTTACTACCCATTTGTGTATACATATGTATATACACACATACATATGTATACATACATATACATATGTATATGAGTACCTTTTCATGTTTTAATGTTCATGTTTATTTATAATCTATATGTCCTCATCCAGCTTGTTTTTGAAAAATTTTTATTCAAGTATGTGTATT-----ATTATGTGTATTATTAAATA chr4 - 94230402 60813561 60813560 60813740 33416663 33416662 33416842 180 TTTTTTGCTTGTGCTTGTAGAGTGGAATTAACTATC--TTAGTGCTTACTGGCGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATA-----------------TCCAGTGTCTGTGTGTATCCATGAACTGT------------AGCATTTT------AAAGTTTTATTCA---GTGTGTATTTGTTCCTTGTTTGTGTAATCCAATA ...:...xx.x.::......x------..x....:.--..x...:x...xx::.:.:....:::..x....:........x.:.....:.........-----------------.::.:...:::...x...::..:.x..:.------------...x.x..------...x.........---:........-----x..:.x...:.x..:x.... 21M6I9M2D60M17D29M12D8M6D13M3D9M5I20M 120/169 71.0% 180/94230402 0.0% 51/169 30.2% 54714369 NA +3051 chr4 + 190214555 115527966 115527965 115528064 99 TGTATACATATGTATATACACACATACATATGTATACATACATATACATATGTATATGAGTACCTTTTCATGTTTTAATGTTCATGTTTATTTATAATC chr4 - 94230402 7596420 7596419 7596518 86633885 86633884 86633983 99 TGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCTGGAGTGCTAGCTCATTTAAATTC ..:.....x..............::.::...::.x.....:.:x...::.:.:.:::xx:.x.:..x..x.x.::.::x..x.xx.:.:.....x.x.. 99M 60/99 60.6% 99/94230402 0.0% 0/99 0.0% 107931546 82283009 +3166 chr4 + 190214555 115537582 115537581 115537631 50 TAAAGTTGAGTCTTTTGGTGCCACCTTCTGGCATAAATTATTGCATAAAG chr4 - 94230402 36702819 36702818 36702868 57527535 57527534 57527584 50 TGAAGTTGAGTCTTTTGGTGCCACCTTCTGGTGTGAGCTGTTTGATAGGG .:.............................::.:.::.:..xx...::. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 78834763 NA +3053 chr4 + 190214555 115546450 115546449 115546523 74 CTGCAACCTCCGCCTCCCCAGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:x:.......::x...x.xx.x........::::.........:......x.:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 97349324 92865231 +14647 chr4 + 190214555 115556907 115556906 115557305 399 AAGATACTAAAAATATATGTCTTTATAGCCTTAGG--------CAGGAATGAAACTATATATC---AAAACCACAC----TGTTACTGCAATTGATATATT-TAATCATTGACTATGGAATATGGCACTCCTCTATACAGGAATACTTATTTTTATCAATCAATAATATTAAATGAAAATGACTTTTCATCAATCTCACCAAGAGCAGTCATGCTTTTCTAGTTTGAAACCTGCTATAAAAATATGTCTTTGGCTATCAAATCTCTATGGCAAACAGAGCTGAAAATGCTAGCTCGAATTAGTTTGTGAGAG-AGTAAATAGCCCTATTTGGTCTTGACCAAGTTTTAAAAGATGTTCTTAGGTTACAAAATTGGATAAAAG----------CTAAATGCTACATTTAAGAATCTTCTTAAAATTT chr4 - 94230402 36714758 36714757 36715176 57515227 57515226 57515645 419 AAGATGCCAATAGTGCAAGT---TATAGCTTCACTTCTTCCTCCAGAAATGAACAAGGAGATCTGTAAAACCACCCATTCCCTTACTGTAATAGATATTTTGTAACTATGTACTGTAGAATAAG--ACTTATCTTTGCAGGAGTACTAATCGTTGTCAATCAGTAATACTAATCAGTAACGACTTTCCATAAATCTCACCAAGAGCAATCGTACTGCTCTAACTTGGGACTTGTTATAAAAA-ATTGCCTGGGTTATCTAATCTCTATGCTAGACAGAGCTGAAAATGCTTGCTCAAATTAGTTTGTGATAGAAGCAGATATCTCCATTTTGATGTGTCTGAGCTTGAAAAGATCTCCTTTAG-CAGAAAATTGGGTAAAAGCTTAGTATGTCTTAATCCCAAATTTGAGATTCCATTTAAAAGTT .....:.:..x.:.::.x..---......:.:.xx--------...:......xxx:x.x...---........x.----:x......:...x.....x..-...::..xx...:.:.....x.--...:x...x.:.....:....x..:x..:.......:.....:...x:::x..:......:...x................:..:.:..x:....::...::..:..:........-..xx.:.x..:....x..........x:.:.................x....:.............x..-..:.:...x.:.:....x.x:x..x.::..:..x.......x.:...x:.-:.x........:......----------..x...x.:.x....:...x..:x:......x.. 20M3D12M8I20M3I10M4I21M1I22M2D116M1D69M1I50M1D18M10I34M 288/392 73.5% 419/94230402 0.0% 34/392 8.7% 78842149 NA +3022 chr4 + 190214555 115564912 115564911 115564953 42 ATGTGTGTGTGTGTGTGTGTATATATATATATATATATCCAG chr4 - 94230402 89821281 89821280 89821322 4409081 4409080 4409122 42 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAG ..........x.x.......:...............:.x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 25743631 NA +3468 chr4 + 190214555 115568177 115568176 115568270 94 AGTCTGAGGGCAGGAGAAGAGTCCCAGCTCCAAAAGTAAGGCTGAAAATTTTTCCTTTCTCTGTTTTGTTTGTTTATTTGTTATTATTCCATTC chr4 - 94230402 68496711 68496710 68496801 25733602 25733601 25733692 91 AATCTGATATCAGTACAAGTGTCTCGGCTTCCTTATCCAGA---GATCTTTTTCCTTTTTTTGTTTTGTTTGTTTGTTTGTTTTTGTTCCCCTC .:.....x:x...x.x...x...:.:...:.xxx.x:x..:---:.xx..........:.:..............:......x..:....x:.. 41M3D50M 64/91 70.3% 91/94230402 0.0% 3/91 3.3% 47071466 NA +3415 chr4 + 190214555 115580346 115580345 115580438 93 TAATTAAATATGTACATATTTAA------TTTAATTTTGAAGTACTGAATACATGCATACATACATGCACACATATATATATATATATATATATATATA chr4 - 94230402 45959564 45959563 45959662 48270741 48270740 48270839 99 TATTTGGCTGTGCACATTTTCAGACAGCTTTTAGATGCTTAATTCTGACTTCAAGCATATATGCATGCACACAAATATGTACATGTATACATATTTATA ..x..::x.:..:....x..:.:------....:x.x:xx.:.x....x.x..x.....:..:..........x....:..:..:....:....x.... 23M6I70M 65/93 69.9% 99/94230402 0.0% 6/93 6.5% 69620782 NA +3212 chr4 + 190214555 115580382 115580381 115580441 60 TACTGAATACATGCATACATACATGCACACATATATATATATATATATATATATATATAT chr4 - 94230402 60813598 60813597 60813657 33416746 33416745 33416805 60 TAGTGCTTACTGGCGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATAT ..x..xx...xx..::......:....x....:.:....:.x............:..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 54766784 NA +3698 chr4 + 190214555 115580388 115580387 115580468 81 ATACATGCATACATACATGCACACATATATATATATATATATATATA---TATATATATATACACAAATATATGCCTACATTAT chr4 - 94230402 61485375 61485374 61485456 32744947 32744946 32745028 82 ATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTG--TACATTGT ......:......:..........x.:.:.:...:...:...x....---.:..x..:....x.:.:...x:..--......:. 47M3I24M2D8M 61/79 77.2% 82/94230402 0.0% 5/79 6.3% 54095013 NA +3105 chr4 + 190214555 115580401 115580400 115580463 63 TACATGCACACATATATATATATATATATATATATATATATATATACACAAATATATGCCTAC chr4 - 94230402 71732108 71732107 71732170 22498233 22498232 22498295 63 TGCATACATAAAACTACATATATTTGTGTATACATGTATATAGAGACATAAATTTATGCTTAC .:...:..:.x.xx..:......x.:.:....:..:......x.x...:....x.....:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 43848293 NA +10521 chr4 + 190214555 115616753 115616752 115617080 328 TTTTTCAGTGATTATGTATCAAATAAGTATGTTTCTCTATATTTGTATCTGTGGGTATGATAGCC---CCAGTTGAGACAGGTGCTGGCAGTCTCAGCCAACTGTTCTTCAAAGGACTATACACAGCTACTTAGAATCATAGCATCATCTTAATATTCCCAGATACTTTAATGAGTTT-TCACTCTAATTAAATGTGCAACTTGCAGAGATTATTGGGTGCCAGATTGCTGTGACTGGCA-ACAGGCTTTCTGTGTTCAGAATCAAATTTTAT-ATCACCTAAACACATCTATTTTTAGTAGTT-TCATTATAGATGAAGTTAGGCTTTATTTCA chr4 - 94230402 36730415 36730414 36730742 57499661 57499660 57499988 328 TTTTTTTATGATTATGTTTCTTACAATTATACTGCTGACTGTTTGTATCTGTCAGCAAGATAGCAAAACCAGC----ACAGGTGTCAGCAGTGTGTGCCATCTGCCATATTAAATTGTGCATGGTGCTATTTAGAACAATGCTATCATCTTAATATTCC-GGATACCTTAATGAGTTTCTCACTCTAATTAAATGTGCAACTTGCAGAGATCATTGGATGCCAGATTGCAGTGGCTGGGATAAAAGATCTCCTTTTTCAGGA--GATCTTTATGGTGATAGAAGTATTTTAGTTTTTAGTACTGAGGATCACAAACAAAGTAATATGTGATTTCA .....:x:.........x..xx.:..x...::.x..xxx.:...........x:.:.x......x---....:----.......:::.....x.xx....x...::x.x:x..:xxx.::.::xx....:......:x..:x:................-:.....:...........-................................:.....:...........x...:....x.-.x.:.x.:..:x.x.....:.--:.x:.....-:.x.:xx..::.:x.:x:.........x.x-xx..:.:.:.::....x.x::x.x...... 65M3I5M4D82M1D18M1I61M1I21M2D9M1I30M1I30M 226/321 70.4% 328/94230402 0.0% 14/321 4.4% 78886338 NA +3377 chr4 + 190214555 115622360 115622359 115622461 102 TCCTCTGAAATATCACCTCCTGCTAATAACAGATACACACAA--TGTATATAGGTGTATGTATGTACGTATATACACACACATACATACATGCATATATATACA chr4 - 94230402 88029533 88029532 88029632 6200771 6200770 6200870 100 TCTACTGAGGTGTTACTTCC----AATGGAAGTTATGAAGAAGTTGTGGACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCA ..:x....::.:.:..:...----...::x..x..::x.x..--...:x.:..x.:...x.....::.x.x.......x.........x..:..:......:.. 20M4D18M2I60M 68/98 69.4% 100/94230402 0.0% 6/98 6.1% 27592827 NA +3167 chr4 + 190214555 115638825 115638824 115638883 59 TCTAAAAAAAAA-------AAAAAAAAAAAAAAAAAAAAAAAAAAAACCGGAAGTGTCACCTCAGT chr4 - 94230402 78783488 78783487 78783553 15446850 15446849 15446915 66 TCTAGAAAAATACATTTGGAAAAAAAAAAAGAAAAAAAATAGAAAAACAAGATGTGCCAGCTCAGT ....:.....x.-------...........:........x.:......x:..x...:..x...... 12M7I47M 49/59 83.1% 66/94230402 0.0% 7/59 11.9% 36855337 NA +3214 chr4 + 190214555 115646356 115646355 115646453 98 CTTCTCTGTCCTTTTATCTGACTCTCTCTCTCTCTTTCCCTCTCTCTTTCT--CTTGCTGTCTCTCTTTCTCTCTCTCTCTGTCTCTCTCTCTCTCTATA chr4 - 94230402 43081930 43081929 43082027 51148376 51148375 51148473 98 CCTCCTTTTCCTTTTTTTT--CTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTA .:..::.x.......x.:.--.....x.:...:x.x.:..x:.::xx....--x:.x....:...:.:...............xx..:::...:...:.. 19M2D30M2I47M 65/96 67.7% 98/94230402 0.0% 4/96 4.2% 72564426 NA +8743 chr4 + 190214555 115664212 115664211 115664420 209 AAAAAGGAAAAATGGCCACCA---GCACCT-GTCTTGAGAGGCAAGATCTTATCACTGACAGCTAATCAATAA-AAACAAATGAAAAGTAATAACGTCAGACTTGAGAAGTAAGGTTTTT-ATTCCTAGCCTGAAGCAAGGGTTCACCAATATGCTAAAATCAATCAATCTTTCC-TTCAGACCGAACCTAAATCCTAATCGTTAAATCTTTAAAA chr4 - 94230402 36738697 36738696 36738912 57491491 57491490 57491706 216 AAAAAAAAAAAAACCCCACTGTAGGTGCCTCACTTTAAAAACCAAGATCTTACTTTTGACAGTTAATCAATAAGAAACAAACAAAAAGTAATAATGCATGACTTGAGAAATATTGTTTTTTATGTGTAGCCTGAAGTTAGGACTTACCAATATGGTAAGATCAATCAATCTTCCCTTTTAGACTGAGATTGCATCTAAATCACCAGATATGTAAAA .....::.....xxx....::---.::...-:::..:.:.:x..........::x:......:..........-.......::...........:.:xx..........:..xx......-..x:x..........:x...::.:.........x...:.............:..-..:....:..:x:.:x...:x....:::.:..x.x..... 21M3I6M1I42M1I46M1I54M1I40M 153/209 73.2% 216/94230402 0.0% 7/209 3.3% 78925515 NA +3361 chr4 + 190214555 115665541 115665540 115665600 60 ATTTTTCTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTTGCTCTTTCG chr4 - 94230402 5847635 5847634 5847694 88382709 88382708 88382768 60 ATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTG ...x.x...x.x.x:..............:.::...........xx.........:..:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 109817906 80396649 +3740 chr4 + 190214555 115666234 115666233 115666353 120 AGCTCAATCCCTAAATCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCTCCCTTCCTCCCTCCCTCCTTCCCTCCTTGCCTCCCTTCCTTCTTTCCTAGCTAATTTATCCACGTATTTCTAG chr4 - 94230402 47571491 47571490 47571607 46658796 46658795 46658912 117 AGCATAATGCTTAGGCACCACTCTTAGCTTCTCTCTTCCTTCTTCCTCCTTCTCTCCCTCCCCCCTCCttttttt---tttcctctctctctctttttttttttttttGTGCACTTCCAG ...x:...x.:..:::x..x.:..:xx:::...:..:............:.::.........:...:.::.::..---.::.:..::...:..:.xx:.xx...x.::::.:.:...:.. 75M3D42M 70/117 59.8% 117/94230402 0.0% 3/117 2.6% 68094743 NA +3296 chr4 + 190214555 115669764 115669763 115669835 72 ATATATATATATATGTATATATATGTATACATATGTATACATATATATGTATATATGTGTGTATATATATAA chr4 - 94230402 52481237 52481236 52481308 41749095 41749094 41749166 72 ACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAA .:..:x.....x::...:..:............:.:.:.:.:xx....:x.:x...:.....:.x....... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 63188527 NA +17304 chr4 + 190214555 115691230 115691229 115691681 452 TTTTTCAAAGGTTTTGTCAAATAAT------------------------TTTAAAATTACATTTGTTCTTTTAAA---ATTTGCAAATGAATTTATTTGGCGTAAAGCATTTGGTATCTAAGAAAAAAATGTAAGCAGTGTTATATTTAACATTTATCTAATTAAAAAGTAATGTGAATAAGATAAACAAATGCAACATGAGAACACAAAAATGTTCAAGTATATATTATGCATAGTTCTAATTTCCTCTCTAAATGTTAAGTACTATCCGTATATTTTACATGCAACAAACACTGGTGTGTGCTTGCTAATATACTTCTGAAATGACATTTTCTTAGTGTGACCCTTCTTTCTAACAATAACTTACATTTTAATTAAATC--AGACCATTTTCATTACATGCCAGATATCTTTGTGTGCTATGTTATCATCCTCCTTTGGCAGAACTGATAG-TTAAAGGTCATGAACTTAAAAAGTTATT chr4 - 94230402 36744025 36744024 36744486 57485917 57485916 57486378 462 TTGTTTGAAGGTTTAGTCATATAAGGAGTATGCTGAAGCATGTTTTCGATTTCAACTTATATCAGCTATTGTGAACTAATTCCCAGATCAGTT-----------AAGCATTCAGGCATAGAGAATGAAATGTAACTACTGTTGTATGTGAGATCCAGCCAATTACATAAAAATGTGAA---------CAAAAGGAGCACAAGAACACAAAAGTGTTCAAGCATCCATTATAAATAGTTCCAATTTCCCTTTTAAATGTCAAGTACAAAATATATATTTTAGATGCAAATAACACTAGAGTGTTGTTGCTAATATACTCTTGAAATTACATTTTCTTAGCATGACCTTTCTTGCTAGCAATAACTTACATTTTAATTAAATCTGTGGCCATTTTCATTTCATGCCAACTATCTCCATGCCAGATATTACTGAACTTGCGTATCAAGAAAGAAAGTTTAAAGGTCATGAGCTTAAATACTTACT ..x..::.......x....x....x------------------------...x..x...:..:x.:.x..x.:..---...:x..:..x.:..-----------.......::.xxx:x:....x:........x:.x....:...x.:.x..::.x.:.....x.x.:x........---------....x.x.:..::...........:........:..x:.....:x.......:.......::.:.......:......x.xx::.........x......xx......:.x....xx.............::......x............::.....:.....x...:.........................--x.:...........x.......:x.....:::..:xxx..:...:::xx..:x:x.:x..::.xx..x..-.............:......x.x...:. 25M24I26M3I15M11D74M9D194M2I70M1I28M 318/432 73.6% 462/94230402 0.0% 50/432 11.6% 78947205 NA +4020 chr4 + 190214555 115713705 115713704 115713840 136 GAGAAGGAGAAAAAGG---------AGTGGGAGTAGGAATAGGAAGATAGGGAGGAAGAAAAGAAAGAGAAGGAGGAGGAAGAGGAAAAGGATGAGGGAGAAAGGGAAGAAGAGGGAAAACACAAAA--AAAGAGAAAGAAGTGGTA chr4 - 94230402 89963534 89963533 89963680 4266723 4266722 4266869 147 GAAAAGGAGAGAAAAGCAAAACTCCAGTATGAGAAACAGTTAGAAGAAAGGCAGAGAAAGCTGAAAGAACAAAAGCAGAAAGACGAACAACGGAGGGCAGCTGTGGAAGAAAAGAGAAAACAAAAAATCGAAGAGGAAAAGGTATTA ..:.......:...:.---------...:x...x.:x.:.x:.....x...x..::.:.:xx......:x.::..x..:....x...x.:x:x::..x..xx:x.......:..:.......x....--:.....:..:.:..:x.. 16M9I102M2I18M 89/136 65.4% 147/94230402 0.0% 11/136 8.1% 25750171 NA +3260 chr4 + 190214555 115724225 115724224 115724319 95 TCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAAGAAAAATACATTAAATATAAA--GATAGATATTTTTAAAGAATGAAGAAA chr4 - 94230402 83671952 83671951 83672046 10558357 10558356 10558451 95 TTTGTGTCAAGACAAGAAAAAAATAAGGAAAAGGAAAAAAAAACAATGGAAA--GCATGAAATGCAAAAGAGAAGGTATTTTAATTGCATGTAAAAA .::..x....:.x..:.......x..::..........:....x..x.:...--:...x....::...--::x..:......x.xx.x...x.:... 52M2D14M2I27M 66/93 71.0% 95/94230402 0.0% 4/93 4.3% 32052273 NA +3145 chr4 + 190214555 115758267 115758266 115758365 99 TTTTTATTTTACACATGCTACTTACTTATTCTCTACTCATATCTTATTAATATTGTCCTCGCCCCTTTAAAAAACAAATAAACAAAAAAACCCAGAAAC chr4 - 94230402 32992099 32992098 32992193 61238210 61238209 61238304 95 TTTATATTTCTCTTATTCTGATCA-TTGTTCCATATGCTGAT---AGTACTACTGAATTCATCCATTTAAAAAACAAACAAACAAAAAAACCCCAAAAC ...x.....:x.x:..x..:x.:.-..:...:x..:x.xx..---.x..x..:..xx:..::..x.............:..............x:.... 24M1D17M3D54M 67/95 70.5% 95/94230402 0.0% 4/95 4.2% 82766168 NA +3000 chr4 + 190214555 115763761 115763760 115763830 70 CTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGCGGTAGCAAAAACCTCGGAATTACTACT chr4 - 94230402 88401249 88401248 88401318 5829085 5829084 5829154 70 CTTAGCAAAAAAAAAAAAAAAAAAACAAATCCAAAAGAACATAATCATCTAATACTTCTATTTTACTACT .....:...................x...xxx....:....xx:x:.x.x..x..:..x:xx........ 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 27362512 NA +3804 chr4 + 190214555 115766912 115766911 115766988 77 CTGCAACCTATGTCTCCCCGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:.x:x..:.:x........:.x...x.xx.x........::::.........:.:....x......... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 97569786 92644769 +3250 chr4 + 190214555 115770001 115770000 115770087 87 CAAAGTTCCCTAGGGACTAAATACAAATAAAAACAAAGCAACAACAACAACAAAACACCAGCAACTAAAACTGCTTGGAATGACAAT chr4 - 94230402 38842314 38842313 38842398 55388005 55388004 55388089 85 CAAAAATCCCCTAAAACAAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACA--GACAAACAAAAAAACCTTGGATAAAAAT ....:x....:x:::..x...:.x...x....:.:.....:.....:..........--::...x:....xx:.:.x.:..:.x... 57M2D28M 58/85 68.2% 85/94230402 0.0% 2/85 2.4% 76927687 NA +3403 chr4 + 190214555 115770018 115770017 115770084 67 TAAATACAAATAAAAACAAAGCAACAACAACAACAAAACACCAGCAACTAAAACTGCTTGGAATGAC chr4 - 94230402 35855473 35855472 35855539 58374864 58374863 58374930 67 TAAATTTAAACAAAAACAAAGCAACAACAACAACAAAACCCAAATAAACAAACAAGGTGTGGATGAC .....x:...:............................x.x.::..x:...xxx.x.xx.:..... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 79914545 NA +5912 chr4 + 190214555 115770124 115770123 115770296 173 AAGCTTTGGTTTTTATGCTAGCAAATACAAAATCAACAGACCTT-CTTTTTCTGGACACAGATGCC----TGCTTAATGAATTTGGAACTGGCATTGCCACAGGTGCAAAGAGTCTAGGAATGCTTAATTGCTTGTTCTTGCAAAGCCCTGGCAGACTAAAAC-CAATATGTTTTACTT chr4 - 94230402 36785123 36785122 36785295 57445108 57445107 57445280 173 AGACTTTGGCTCTCAT-CTATCAAACCCAAG-----CATGCGGTACTCTCTCTGGACACAGATGTACGTATGTTTAATAGCTTTGGAAGAGGTATTATCACAGGTGCAGAGCAGGCAGGAATGCATAATTGCTTGTTGCTACAAAGCCTTGGCACCCCAAGATGCAATATCTATCATCT .::......:.:.:..-...x....:x...:-----..x:.xx.-..:.:..............:x----..:.....::x.......xx..:...::..........:..x:xx:........x............x:.:.......:.....xx.:..:.:-......x.x.:.::. 16M1D14M5D8M1I21M4I93M1I15M 120/167 71.9% 173/94230402 0.0% 12/167 7.2% 78985001 NA +3222 chr4 + 190214555 115811425 115811424 115811496 72 TAAATATCCTCATG--TTCAATTTCTATAATTAAACATTTTGTTTTTGCTTTCATTAGCATTTTACTAAAGAGA chr4 - 94230402 87514585 87514584 87514658 6715745 6715744 6715818 74 TACATGTACTCATGGCTTAGTTTTGCTTAATTCAACATTTTATTTTTGCTTAATTTAACATTTTATCAAAGAGA ..x..:.x......--..x:x...x:x.....x........:.........xxx...:.......::....... 14M2I58M 55/72 76.4% 74/94230402 0.0% 2/72 2.8% 28296840 NA +3227 chr4 + 190214555 115827609 115827608 115827663 55 TTTAAATTAATATTATGTGTGTGTATATATATATATATATATATAAAATGAATGT chr4 - 94230402 72121933 72121932 72121987 22108416 22108415 22108470 55 TTCAAATGAATGTTTTATGTGTGTATATACATATATATAAATATGGAACTAGTGT ..:....x...:..x.:............:.........x....::..:x.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 43705676 NA +3148 chr4 + 190214555 115850427 115850426 115850477 51 GTGTGTGTGTGTATGTGTGCATGTTTGTGTGTGCATGCATGCATGTGAGGT chr4 - 94230402 7002321 7002320 7002371 87228032 87228031 87228082 51 GTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATGATGT .........xx.:......::.x.........:..x........:...x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 108848106 81366449 +3466 chr4 + 190214555 115859235 115859234 115859327 93 ATATATATATATATACACATATATAAATGTATATATACGTATATATAAATGTATATATATACGTATATATAAATGTATATATATACACACATA chr4 - 94230402 73121111 73121110 73121203 21109200 21109199 21109292 93 ATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACA ....x:...:.:...:...:.x.x:x...x:..:.........x:..x.:.x:.....:.:x...:........::::x:.:.x.x.....:. 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 42738124 NA +3191 chr4 + 190214555 115859262 115859261 115859348 87 TGTATATATACGTATATATAAATGTATATATATACGTATATATAAATGTATATATATACACACATACTATTGGAATACTATTCAGCT chr4 - 94230402 37363040 37363039 37363124 56867279 56867278 56867363 85 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTAT--ATGTGTATGTATTCACACACAATATGTATAAAATATTAAGCT ...:..:....x.:......x...:.:.x.....:xx:.:...--....:...:...x......:.x...xx:x.x.x....x.... 43M2D42M 60/85 70.6% 85/94230402 0.0% 2/85 2.4% 78496222 NA +3266 chr4 + 190214555 115864550 115864549 115864610 61 TAAAAATATATAA-----AATA--TATATATAAGTATGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406404 4406403 4406471 89823932 89823931 89823999 68 TAGAAGCATATAACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..:..::......-----....--........:x...:x....................x:....... 13M5I4M2I44M 52/61 85.2% 68/94230402 0.0% 7/61 11.5% 111458146 78756409 +3014 chr4 + 190214555 115864578 115864577 115864618 41 ATGTGTGTGTGTGTGTGTGTGTATATATATATACATACACA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x....................:..::... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 26043297 NA +3935 chr4 + 190214555 115865639 115865638 115865732 94 TAAGAACAGGTGGTTAGTTGCACTCTGCCAAAAA--------AAAAAAAAAAAAAAA---------AAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 94076824 94076823 94076934 153469 153468 153579 111 TAAGAAAATGTGTTTTATTATAATCCAGTAAAAAGGCTGGTCAAAAAAAAAAAATAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAA ......x.x...x..x:..::.x..::x:.....--------............x..---------.x..x..x..x..x...........................x... 34M8I15M9I45M 75/94 79.8% 111/94230402 0.0% 17/94 18.1% 21788815 NA +3079 chr4 + 190214555 115865669 115865668 115865734 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAG chr4 - 94230402 69673929 69673928 69673994 24556409 24556408 24556474 66 AAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGAAAACCAAAACAG .........x::...x:...xx.::..xx..................:......:.:xx.:..x.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 46191740 NA +3002 chr4 + 190214555 115865671 115865670 115865733 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAA chr4 - 94230402 69673929 69673928 69673991 24556412 24556411 24556474 63 AAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGAAAACCAAAA .........x::...x:...xx.::..xx...........:......:......:.:xx.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 46191742 NA +3206 chr4 + 190214555 115865689 115865688 115865738 50 AAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGATG chr4 - 94230402 37322393 37322392 37322442 56907961 56907960 56908010 50 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTG .....:..............:.........:::x.:::...:.....:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 78543296 NA +3099 chr4 + 190214555 115865691 115865690 115865739 49 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGATGA chr4 - 94230402 77178712 77178711 77178760 17051643 17051642 17051691 49 AAGTAGGAAAAAAAAAAAAAGAGGGAGAGATAGAGAGACAAAAAGCTGA ..:x.::................:......x.......x....:.x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 38686979 NA +3118 chr4 + 190214555 115865696 115865695 115865737 42 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAAAAGGAT chr4 - 94230402 87676347 87676346 87676388 6554015 6554014 6554056 42 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAAT .................................:x..x::.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 28189349 NA +3053 chr4 + 190214555 115865698 115865697 115865731 34 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 87676347 87676346 87676380 6554023 6554022 6554056 34 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .............:.................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 28189351 NA +3100 chr4 + 190214555 115866479 115866478 115866560 82 GAGATGAGTGAGGAAGGAAGGAGGAAGGAAGGAAGGAAGGAAGGAA---GGAAGGAAGG----AAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 44053979 44053978 44054067 50176336 50176335 50176424 89 GGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAA .:...:x....:...x.:.....:...:..:......::x...:..---..:...x:..----:.:...:...:....:x.::..x... 46M3I10M4I26M 57/82 69.5% 89/94230402 0.0% 7/82 8.5% 71812500 NA +3252 chr4 + 190214555 115908777 115908776 115908840 64 AACATATATATAAATATATATAAACATATATATAAATATATATATAAACATATATAAAAATATA chr4 - 94230402 17520748 17520747 17520811 76709592 76709591 76709655 64 AACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ....x.........:.:.x...x.....:..:.:...::x.:........:..::.x.x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 98388029 91826526 +10549 chr4 + 190214555 115913147 115913146 115913484 338 TTCCAGCTTCTAAAGCATAAGGTTTGTTAGTGCTACACAGCTGTAGAAATTTAAATAACTGGCATGTGGAGACAGGGTGAAGTTTAGCCTTTTCAAGCAGGTTTTTTTTTTCTCTTAGCACTGACATATTGTCTCATCAACACATCTAGGAGCTTCTATTTTTGAAATGCTTCACTTATCACCTGTGGAGTGTTGAAATGGAACCTATTTTTTCCCCAAAGAGAACATTCTTTAGCAAAGACAGATTGTCTCTTCTGCATTAAGGAACTGTCCCTCATGAAATACTCTAT----------------TGAGACAAGCT-CATGCTTTCTGCCTACAAAACTTGATTTTTAAAAAAT chr4 - 94230402 36873279 36873278 36873621 57356782 57356781 57357124 343 TTCAATTTTCTTGTCCATAAGGCATGTAAAATCAGCACATCTGTAGAAACACAAATAACTTACATGTGAGGACAAGCTGAAATTTAGCATTCTCAGGCAAATTGTATTTATCCATCAGCATCCACATACTGTCTCATCAACACATCTAGGCACTGCTATTTTTGAAAAGCCTATTTTATCACTTGTTGAATGTTTGAATCTGCTTTTTTTTTTCCTCAAAAAG--TGTTTCTTAG-ATTGACAGATT-TGTATTTGAAATAAAGCAAGCAT--------AAAAACTCCACACTTCTATGCATGCCATGTAATGAGCCACATATTTTCTGTATGAAAACTTTGAACTTATAAAAAT ...x.x:....x:xx.......:x...x.:xx.x:....x.........:x:........x:......::....:.x....:......x..:...:...::..x.x...x..:x.:....::x.....:.....................x:..x............x..:.xx:.......:...x..:....x:...xx:x::.x........:....:..--::..::....-.xx........-.x.x..:x:x..x...x..x::.--------...x....:.:----------------..x:.::...:-...::......:x.:x...x:....x:..xx...... 223M2D10M1D11M1D23M8D11M16I11M1I37M 226/326 69.3% 343/94230402 0.0% 29/326 8.9% 79039868 NA +3051 chr4 + 190214555 115922416 115922415 115922503 88 ATACATGTATATATATATACATACACATATATATACATATATATACATGTATACATGTATATATATGTATATATATGTGTATGTATAT chr4 - 94230402 64944124 64944123 64944211 29286192 29286191 29286279 88 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATAT .:.:.x:..::....x...x.....x....:....:..x.:.:x:xx.....x:x.x...x.:...:.::x.x.::............ 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 50978292 NA +3138 chr4 + 190214555 115924207 115924206 115924277 71 TTTTATAGGTTTTCTCTTCACTTTTTTATTATTTTCTTTGCTGTACAGAAAAAAAAGAAACATTCAGGCCA chr4 - 94230402 3382052 3382051 3382122 90848281 90848280 90848351 71 TTCTATACACTCTTTTTTCTCTCTCTTCTTATTTTTTTTTCTATACTGAAGAAAAAAAAAAAATCAATCTA ..:....x::.:.:.:...x..:.:..x.......:...x..:...x...:.....:...x.x...:x.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 112542155 77672400 +15260 chr4 + 190214555 115929391 115929390 115929799 409 CTAATGTATTTCA-------AACCGCTGTATAAATTATATGTATCATAGATGAATTATTAATTCCCAAA--GTGTTAAAATGCAAGACAGTTTGAAGGGAAGAAGGGATGCT-AAATAAATCAATGGTGATTTTAATAAACTAGAATCTTTTAGGTACTAAATCTGTCTGCATCTGATCTGAATTGCAATTACCTGTCAAAAATTCATCCATCATCACAAGCTCCAAACAAAGTTTCTTGGCAGCAGATGTTTGAGAAAAGCTATTTTGTGTGGCAAATTTTTCTTGTGGCTTACAACATCCTCAGAAATGAAAAAAATTTCTGGAAACAAT-TGTGTACAACTCAGCTATAACCTGTTAGGTATAAAAAGTCATGGTTTACTTAGTTTATGTAATTTATAAATAC--ATGCCCTATACAAA chr4 - 94230402 36878991 36878990 36879390 57351013 57351012 57351412 400 CTGATGTATTTCATATTATGAGCAGCTGTATGAGCCCTAAATACCATACCCAAGTGATTAATTTCTGAATGGTGGTGAAAAG------------------AGAGGGGGTGCTTAAATAAATCAATGGTGATTTTAATAAACTGGGAGCTTCTAGGTATTAAATCTGTCTGCATCTGATCTGAATTGCAATTACCTGTCAAAAATTCATCCATCATTGCAAGTTGCAGACAAACTTTC-TGGCAGCAGATGTTTCAGGAAAGCTATTTCATATGGGAAATATATTGTTTGTTGTATAGCATTCCCAAGAACAAAAAGCAAAGTAGAAAACATTCCATGGATAA--CAGCAACAACTTCTATGTCCTATCTAAGCCTAATTTA-TTGGTGAATATAATACGTAAATGTGAATTTCCAATATAAA ..:..........-------.:.x.......:.:::x..x:..:....xx::.:.x.......:.::..--...x.:...x.------------------...:...:....-.............................:.:.x...:......:.........................................................::....:.x..:.....x....-...............x..:..........::.:...x....x.x.:x.x..x:x..:.:...:.:..::..::....:x.xxx:x.:.....x.-::..x.:..--....x.:...:.x.xx.x:x..xxx.:x.x.::....-..:..xx..:....x::.....::--..x:..x...:... 13M7I49M2I11M18D12M1I124M1D94M1I9M2D37M1D24M2I14M 286/387 73.9% 400/94230402 0.0% 35/387 9.0% 79050400 NA +3359 chr4 + 190214555 115935694 115935693 115935862 169 ATTTAAGACATTGTAAAACGCTACATTCAGGCTATGCATGTAAAGTGCATATAAAACATAAACAACTTTTTTGTTTAGACTTGGGTTCCGTCCCCAAGAT------ATCTCATATATATATATATATATATATATATACACACACACACACACACACACATATATATTCAAATAT chr4 - 94230402 66904728 66904727 66904896 27325507 27325506 27325675 169 ACTTAAGAAAATGCTGAACACTTC--CCAGTTTAGACACATA--GGGAATACAAAACA-ATATTACGTTGTTCTTCAG-CTAGGCTTTGGTCTACTAATCTTGCTGGTTTCGCACTGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGT .:......x.x..:x:...:..x.--:...x:..x:..::..--.x.x...:......-.x.:x..x..x..x..:..-..x..x..:x...:x.x.:x:------:.:..::.:xxx.:.x.x:......:..::..........:...........:..x..x:....::.:. 24M2D16M2D14M1D19M1D21M6I69M 105/163 64.4% 169/94230402 0.0% 12/163 7.4% 49030966 NA +3075 chr4 + 190214555 115935780 115935779 115935846 67 TCCGTCCCCAAGATATCTCATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 10913782 10913781 10913845 83316558 83316557 83316621 64 TCTGTCC---AGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCAC ..:....---....x:..:..:...:...:.:..:...x.:.............:..x.x..:x... 7M3D57M 48/64 75.0% 64/94230402 0.0% 3/64 4.7% 105021998 85192557 +3026 chr4 + 190214555 115935784 115935783 115935843 60 TCCCCAAGATATCTCATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 10572829 10572828 10572888 83657515 83657514 83657574 60 TCCATAGCATTTCTTAAATATATATAGAGAAATATATATATATGCACACACAGACAGACA ...x:.:x..x...:.x.........x.x.x...........::........x...x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 105362955 84851600 +3183 chr4 + 190214555 115997500 115997499 115997576 77 TTAGAACAGGAAGGAAA-ATAAAGAAAGGAAGGAAGGAAAATAAAGAAAGGAAGGAAGGAAAAGAAAGAAAGGAAGGA chr4 - 94230402 472362 472361 472439 93757964 93757963 93758041 78 TTGGAAAGAGAAGAAATTGCAAAAGGAGGAAGACAGAGGAATAAAGAAACGAAAGATGAAAAAGACAGCAAGGGAAGA ..:...x::....:..x-::...:::......:x..:::..........x...:..x.:......x..x....:.:.. 17M1I60M 53/77 68.8% 78/94230402 0.0% 1/77 1.3% 115525138 74689417 +16664 chr4 + 190214555 116029063 116029062 116029586 524 CTTTAGCTAACATTTCTT-CCACATGATAAAACACACAATTTTTAAGTGGAAGTGAATACTCTGATGCAAATATACAGTGATTCATTTTTATGGTTCAGAGGAAAATAATAACAGCTATTCATGATATTCAAAGCAACTGTTAAGTCTTTATTCGTATTCTCTTTTACAGAGTTTGTGGATTATTAG-AACACAACATTCAGAGTCCTGTGAAATTGCCTTAATGATAACTGCTCATGCACTTAGT-GCTTCAAAATC-CCCATGAATACAGAAGTCAATTAT-GTGAGCAGGTGCACCCAAGTAACTAGGTTTTATGCTCACTGGGATATCACAA-CATTTAAATTTGATAAAGTTAATTCGCAAATATGTACATTCATACACAACAATAAGTTAATATACATTCATGAAAATGCAAATAGAGAAATCAAG-------GCCTGGAAA--GTGATTAAGATTGCTTTTTAGAAAATTGATACAATGATTTCAGCTCCATGTAAGATTTTTC------CTGAGGATAAAATCAGCATAGAAGAAAA chr4 - 94230402 36911379 36911378 36911915 57318488 57318487 57319024 537 CTTTAACTAGCATCTCTTTCCATTTACCATCATTTCTAATTGCTATATGAAGGTGAATTCCCATCTGTAAA----CAGAGATTTGTTATCCAGGCCAAGAGAAGAA----ATCACCTGTGCCTACATTTCATAGTGTCAGGTGATATTTTATACACACTTGTTTTCACAGACCTCACAGATCACTTGCAGTACAATATTTGGGGAGCTGGAAGCCTGTCTTAATGATCATTGCTCATGCACATGGTTGCTGGAAAATCATTCATGAATATTGAATCCAATTATTATGAACAGGTGCAGCCAAGTAACTACATTTCATGCTCACTGAGATATCACAAACACTTAAATTTGATAAAGTTAATACACAAATATATACTCTGGTACACAACAATAACTTCATGTACATTCATGAGAATGCAAATATAATGATCATGATTCTCAGTTTTGAGGTTGTGATCAAGATTCATTTGCAGTAATTTTAAACAATTATTTCACCTCATTGCTTAATTCTTTCTACAGCTGCGAATTCAATAAGGGTGAAAGCAAA .....:...:...:....-...:x.:x:.xx.:x:x:....x:..x:..:.:......x.:.xxx..:...----...x....::..x.:xx..::x....:.:..----.x..x..:.x.x.:xxx....x..::x.x.x.:.xx:.....x.::.:.:x:...:.....x:.::::...:.:.x.-.::....:...::.:.xx...x:.:x:..:.........x.:...........x.:..-...xx......-::........:x...x:.......-:...:........x...........x:...:..........:..........-..:....................x.:.......:...x:.x:.............x..x..:...........:..........x.:x:....x.-------.::.x..::--.....:......xx...x:..x..x..x.x.....x......x...xx..:xx:...:..:------...x.:..xx...x..x:.::...x... 18M1I52M4D31M4D77M1I58M1I11M1I24M1I52M1I95M7I9M2I61M6I28M 357/516 69.2% 537/94230402 0.0% 29/516 5.6% 79117684 NA +3118 chr4 + 190214555 116043326 116043325 116043378 53 AAATGGGGTTTTCTTTTCTGTCTTTTTTTTTTTTTTTTTTTTTTTTGCCTAAA chr4 - 94230402 58919455 58919454 58919507 35310896 35310895 35310948 53 AAATGGGGTTTTATTTGTTGGTTTTCTTTTTTTTTTTTTTTTGTTCCCCTGGA ............x...x:..x:...:................x..:x...::. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 57123871 NA +4174 chr4 + 190214555 116046450 116046449 116046569 120 TCAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGA---AGAAGGAAAGAAAGAAAG chr4 - 94230402 30533162 30533161 30533286 63697117 63697116 63697241 125 TTAAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG .:...x.:....:...........:::::..:.......xx.x:.:....x..:::xxx...--.....xx..:.x...::..x:......:.....:.:..x.---::.....:..:..x.... 62M2I40M3I18M 81/120 67.5% 125/94230402 0.0% 5/120 4.2% 85513288 NA +4112 chr4 + 190214555 116046455 116046454 116046593 139 GAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG-----AAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAG chr4 - 94230402 72821453 72821452 72821596 21408807 21408806 21408950 144 GGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAG .:.....:x.::.......:x.:.xxx:x.:x...:xx...:::............::..::..x..-----.::...:.:.::..:..xx.:xxx::.....:...:x..:.x........xx..x..:........x:.... 67M5I72M 87/139 62.6% 144/94230402 0.0% 5/139 3.6% 43225002 NA +3135 chr4 + 190214555 116046469 116046468 116046553 85 GAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:...x.:xx..x.....x...::...:.........:.x..x.:xx..::.:.::..:.:..x:.::.x..::......:... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 79188176 NA +3044 chr4 + 190214555 116046474 116046473 116046557 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx:..:.:::...:....x..::.x..::..::.:..:. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 79188180 NA +3146 chr4 + 190214555 116046488 116046487 116046600 113 AAAGAA-----AGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAGAGA chr4 - 94230402 25255598 25255597 25255715 68974688 68974687 68974805 118 AAAGAAGCTGCAAAAATTAGAACAGATGGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGA ......-----.:...xx.::.x...x:.:....x..:.....x::..x.x:x..::...xx:.:x...:.....x.x:...:...:.....:...:::.:xx:.....x::..:... 6M5I107M 70/113 61.9% 118/94230402 0.0% 5/113 4.4% 90790890 NA +3424 chr4 + 190214555 116046499 116046498 116046604 106 GAAAGAAAGAAAGAAAGAAAGAGAAAGAGAAAGAAGGAAAGAAAGAAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAGAGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAG-AGGAGACAGA ......:.....x......x.:x.:...:.::x:....:.x:xx..x....xx..x..:...x.x...:.:x:.x..:..:..:x.::.......-.:....x... 95M1D10M 69/105 65.7% 105/94230402 0.0% 1/105 1.0% 54711798 NA +3478 chr4 + 190214555 116046544 116046543 116046663 120 AAAGAAGAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAGAGAAAGAGAGGGAGAGAGACAGAGAAGGAAGGAAGGAAAAAGGAA-----GGAAGGACGGGTGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG--GAGAGGAATAAAG ...x..:...:.:........::.:.::.:.......xx.x:...:.:x:..:.xxx....x.::..xx..:.:...::.:x:.....::...:..:..-----....:.--.:.x....x:... 99M5I6M2D13M 75/118 63.6% 123/94230402 0.0% 7/118 5.9% 85513380 NA +3097 chr4 + 190214555 116046565 116046564 116046606 42 GAAAGAAAAAGAAAGAAGGAAAAAGAAAGAAAGAGAAAGAGA chr4 - 94230402 25781763 25781762 25781804 68448599 68448598 68448640 42 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGA .................:..........:.x..:.:.:.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 90264802 NA +3431 chr4 + 190214555 116069496 116069495 116069635 140 AAATGAAAAAATGCCACATTTATAAATTGAAAAATATAATATTGTTAAAGTGTTCATACTATACAATAGACATTGAATCTACATTTATTACAATCCATATCAAAATACCAATGACATTTTTTACAGAATTAGAATGAAAA chr4 - 94230402 15385420 15385419 15385553 78844850 78844849 78844983 134 AAATGAAAATATTCAAA--TAATAATTTTAAAAGCTTTTTCTTTTCACAGTGATGTTATTAAGTAGGAAACTTTGAATCTTCATTTAAAACATTTCATATCAAAATTTAACTTAATTTCTTTAT----TTAAAATGACAA .........x..x.x.x--.x....x..x....::x.xx.x..x.:.x....x.xx..:..x::.:x.:..x........x......xx...x.:...........x:x.x.x.xx..:....:----...:.....x.. 17M2D105M4D12M 91/134 67.9% 134/94230402 0.0% 6/134 4.5% 100684076 89530479 +6947 chr4 + 190214555 116104276 116104275 116104619 344 TAAGCAAAGTGAGCAACTTGAGGTAAATTAAGTAATATAGGTCATAAAATCACAACACATGATATTAATCTATAATTCACTGACTAGAATTTG--ATGGAAGACT--ATATTTTTATTAAAA-TCATTCATCTTGTTGATGACTAACTGACCATTGAAGGTCCCTAGTACATGATAAAAATTGGTTGAAGTAGCCATTTTATTTTAACAGTTTCATTGAGCATCACCTCTTCAATGACACA---GAATAATTATTT------TTCACCCCAAGTGGCATTCAAG---ATATTGGAAGGGATGTGATTTAT-----TAAGTTATTTTTAACAAGCTTAAAGTGA---TGATTTTAAAATAAATGAATATT chr4 - 94230402 36967876 36967875 36968237 57262166 57262165 57262527 362 taaataaaatGATCAATTTGAGAAAAATTAAGTAATAAGTTTAATAAAATCATAAAATGCAATTTTAAGCTGCAGTGAGCTGAATAAAATATGAAATAGGAGCTTGCATTTTTTTATTAGAGCTCATTAATCTTGTTTATGACTTATTGAGTATCTTTGAGTCACTGAGCATGATAAAAATTGATCCCAGTGGCTACATTGTTACA------TGCTTTAGCAACTCCTTTTTACAGCTGTGTTCAACTGACTATTTCTCTAGTCCATTCTCTGCAACATTGCAGGCAATGCTGCAGCATGTGTGATTTATGGCTGGGAACTA-CTTTAAGAGGCTTAATGTTGTTCTGAACTGAATACAAATAAATACT ...::...:...x...:.....:x.............x:xx.x.........:..x.::::..x....x..::.:.xx:....x..:...x..--..:.:..x:.--..x.........:.:-.....x........x......x.:...x:..:xxx.:x:.x:x.x:..............:.:xx...:..:.:x..:..x:.------.xx..x....x.x...:..:.xx.x::::---:.x.:.:.....------.:..::.:xx.:::....xx..---..::..x.:x:x:..........-----x:.::..-:.....x.:......x..x:---...x:.x..x.:....:....:. 93M2I10M2I15M1I83M6D29M3I12M6I22M3I23M5I7M1D20M3I23M 218/337 64.7% 362/94230402 0.0% 32/337 9.5% 79136400 NA +3589 chr4 + 190214555 116136860 116136859 116136932 73 CTCAAAAAAAAAAAAGAAAAAAAAAAAGAAAAAACCCAA--CAAAACAAAACAAAACAAAACAAAACAAAAATTA chr4 - 94230402 82008656 82008655 82008730 12221673 12221672 12221747 75 CTGAATGAGAAAAAAAAAAAAAGAGGGGAAAAAGTCCAAAACACAACAAAAACAAACAAAACAAACCCAGAATTA ..x..x:.:......:......:.:::......::....--..x.......xx............x.x.:..... 39M2I34M 56/73 76.7% 75/94230402 0.0% 2/73 2.7% 34128204 NA +3238 chr4 + 190214555 116136863 116136862 116136932 70 AAAAAAAAAAAAGAAAAAAAAA----AAGAAAAAACCCAACAAAACAAAACAAAACAAAACAAAACAAAAATTA chr4 - 94230402 59518576 59518575 59518649 34711754 34711753 34711827 74 AAAAAAGGAAAAGAAAAAGAAACAATAACAAAAAGCCCATCAAGACAAAACATCAAGACATACAACAGAAGCTA ......::..........:...----..x.....:....x...:........xx.x:.x.:.x....:..::.. 22M4I48M 53/70 75.7% 74/94230402 0.0% 4/70 5.7% 56618287 NA +3242 chr4 + 190214555 116136863 116136862 116136923 61 AAAAAAAAAAAAGAAAAAAAAAAAGAAAAAACCCAACAAAACAAAACAAAACAAAACAAAA chr4 - 94230402 82008666 82008665 82008726 12221677 12221676 12221737 61 AAAAAAAAAAAAGAGGGGAAAAAGTCCAAAACACAACAAAAACAAACAAAACAAACCCAGA ..............::::.....:xxx.....x........xx............x.x.:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 34128197 NA +3022 chr4 + 190214555 116136876 116136875 116136927 52 AAAAAAAAAAAGAAAAAACCCAACAAAACAAAACAAAACAAAACAAAACAAA chr4 - 94230402 75412024 75412023 75412075 18818328 18818327 18818379 52 AAAAAACCAAACAAAAAACCCAGCAAACCAAAACAAACAAAAAAAAAACCAA ......xx...x..........:....x.........xx....x.....x.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 40724852 NA +5786 chr4 + 190214555 116148206 116148205 116148401 196 ACACAGATTTCTTTCA--------TTAAAAATAGCTAAGTTCATAAATAAA--GTTTATA-TTAAAATTTAATTGATTTTGTTTCCTTGGGCAATATAGTGATATAAAAGTGTTGAAAATAGAATCTTCCCTTTGAAATCAGTGGAGCAAAGAAAGAAAATTTAGTTTATTTCTCAATG--TGCGTATCTGATTTGTACAGAGTTCTCA chr4 - 94230402 37024126 37024125 37024333 57206070 57206069 57206277 208 ATACATGTTTCTTCCAGCTGTCCACCAAGAAGATGGGAGTCCATAAACAAAAGGTTCATAATCCGAGTATAGTAGATTTTACTTCCTCGGGCAATGCAGTGCTATAAAAGTGTTTAAAATAGACTTTCCTCTGTGTAATCAATACAACTTTCACAGAAAGATTGGTTCTTTTCTAAAGACCTTTTTAACTG-CTTGCACAGGACTCCCA .:...x:......:..--------::..:..x.xxx:...:......:...--...:...-.:x:.:.x..:.x......::.....:.......::....x............x........x.:.:.:..x..x.....:.:x.:.xxxx.x.....:x..:...:x.....x..x:--.x:x..x...-:...:....:::..:.. 16M8I27M2I7M1I118M2I10M1D17M 133/195 68.2% 208/94230402 0.0% 14/195 7.2% 79124080 NA +3013 chr4 + 190214555 116179096 116179095 116179137 42 TCTCTTAAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAAAAAA chr4 - 94230402 79828831 79828830 79828872 14401531 14401530 14401572 42 TCTCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAA ................::........:..:.:::........ 42M 35/42 83.3% 42/94230402 0.0% 0/42 0.0% 36350265 NA +3313 chr4 + 190214555 116179101 116179100 116179164 64 TAAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAAAAAAACCATATCTAAGCATGTGGCACATGCA chr4 - 94230402 10862982 10862981 10863045 83367358 83367357 83367421 64 TAGAAAAAAAAAAAAAAAAAAGGGTGGGAGAACAAAAACAACAACTGAAAATGTGCCACATACA ..:.........:....:....::x.::....x......x.:.x..:.:x.....x.....:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 105316119 84898436 +11108 chr4 + 190214555 116206348 116206347 116206591 244 TAGGCAGATGTTTTTGCAGAGGCAAGGGAAGAGAGGAAGATTTAGGATGTGCTCTGGCCAAGCAGCTCAAAAATTACTCTATCACAGATGAATAAGCATCCCTACCAAACACACTGTCATCGTCCTTCTAGTTCTGTGTAATAGATAATAAAAAACCATCTGTCCATTGCAGTAATTTGCCAAGAGCACAGCCTAACATATTATTTCATTTTACTAACTTAAAAATG---AAATAATAAACAGTATT chr4 - 94230402 37105115 37105114 37105351 57125052 57125051 57125288 237 TAAGCAGATGTTCT-GCAGATGCAA--------AGGAAGATTTAGAATGTTTTCTGGAAAAGCAGCCTGAAAATTACTCTCACACAGACAAATAAGTATCAGTACAAAGCATATTGTTGCAAGCCTTGTATTTTTGTGTAACAGATAATGAAAAACCATGTGCCCATTGTAGTAATCTACCAAGAAGCCAGTATAGCATACCATTTTACTTT-CTGTATTTAAAATATCCTAGTAATAAACAATATT ..:.........:.-.....x....--------............:....x:.....xx.......:::...........xx......::......:...xx...x..:..:.:...:::x:x....x..x..:.......:.......:.........x..:......:......:.:......:xx...:x..:....::....:.:...-..:xx..x.....:---x.:.........:.... 14M1D10M8D179M1D14M3I17M 178/234 76.1% 237/94230402 0.0% 13/234 5.6% 79101233 NA +3174 chr4 + 190214555 116216454 116216453 116216526 73 CACTCTTGGTATTTTATGGCTATATAAGTGAAAACAAACACACACACACACACACACAAAAAAAAAAAACAAC chr4 - 94230402 56248413 56248412 56248484 37981919 37981918 37981990 72 CACTTTTAGATTGTCACTGTT-TGAAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAAC ....:..:.xx.x.:.:x.:.-.:x...::..:...................:.......x..x..x..x... 21M1D51M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% 59968041 NA +3110 chr4 + 190214555 116304791 116304790 116304844 54 CTTTTTCTGAGTTGTAGTTAAGTCAACTAATTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 55371850 55371849 55371903 38858500 38858499 38858553 54 CTTATTCTGAATAATGAGTAAGACCACTAAGTCTTTTTTTTTTTTTTTTTTTCT ...x......:.x:.::x....x.x.....x.....................:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 60932941 NA +3224 chr4 + 190214555 116328295 116328294 116328347 53 AAAGAACATATAGTATGTGTGTGTGTGTGTATATATATATATATATATAAAAT chr4 - 94230402 52579760 52579759 52579812 41650591 41650590 41650643 53 AAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAAT ...x...x:...:x..::............................:.xx... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 63748535 NA +3029 chr4 + 190214555 116328301 116328300 116328344 44 CATATAGTATGTGTGTGTGTGTGTATATATATATATATATATAA chr4 - 94230402 52579768 52579767 52579811 41650592 41650591 41650635 44 CATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAA ....x::..:............:...............:.x... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 63748533 NA +3003 chr4 + 190214555 116328311 116328310 116328397 87 GTGTGTGTGTGTGTATATATATATATATATATAAAATTCCTGATTATGTTTCTGGAAATCCTCTTCATCAAGTGTCTCTTAATGTGA chr4 - 94230402 3519933 3519932 3520019 90710384 90710383 90710470 87 GTGTGTGTATGTCTATATATATATATTTTTTTGCAATACTTTTTTATGTTTAGAGAAATATTATTATTTATATTTGTATTGGTATGA ........:...x.............x.x.x.:x...x.:.xx........xx:.....x:.x..xx.:.x:.x.x.x..::.:... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 112808378 77406177 +15530 chr4 + 190214555 116346341 116346340 116346960 620 TACATTAATCACATGGTCATGATACAAGGGAATTTGAGAATAACAAGGTAA--AAATCACCAGAAATTCATTCTAATTGTTACAGAGTATTGACCCATCATATTTCATACATTAGAGAATGAAATTTTAATTTTACTTAATTTATGTTATTAGGTGTTTTATTTTTTAACAAGTT-------TAAGTTGTAGGATATAGGTTTTTAAAAGATAGGTGAAAAGCAAATA---CAGACTATGGCCACCAAATCAATAGACCTTTAAAAACCAATTAGTTCTTCAAATATATACCAAATGGACAAGGTACACATTAATATGAAAGTCATAAGTAAGAAAAGTAAATAGAAAAAGGAAAGTAATTGCTTTTCAGTGAAGCTTTAAAAAGAATAAACCAAAGCAGTCAGGAAGAAAATCCTGTGGCTTACAAAATGATTTGCCATTGCAACGGTTAATTTCTAGTTTATAATGGGTTTTATTTCCACACTTTTGCAGTAATACATTCATTTCATGCCCAATTTATACCAGAGTTGGCCAGAGAATCCCTTATAGAGATA--AGGCAGTTATATTTCATCTTATCTTCTGAGCTATATCAGCAT-AACATTCT--GTAACACTGGAAGATACTAACACAATGT chr4 - 94230402 37226374 37226373 37226973 57003430 57003429 57004029 600 TGCATTAATAACAAGCTTAACACAAAAGGAAA---AAAAATTGCAAAGAAATTAAATTACTTGGA--TTATTCTGATGTTTCGGGGATGCTGACT--TCGCATTTTCTAGA--ACAAGAAGCAGTTTAAAATGTGGTAGCTTTGAGT------ATGTTCGTTTTTCTTAAGAATTCTTCAGATCTGCTGGGGGGGTTGGGG----AGAAGAAAGGTAGGAGGTGAAGATGACGGGGCACTATCACCAATTCAATTTAATCTTAAATGCCAAAAAGCTTTTCAAA-----ATCAAATACGGGAGGGAAA-ATTAGCATAAGAATCACCAGTAATAAAAGTAAAGAGAAAGAATAAAGTAATTGCTTTTCACCAAAGTTT----------AAAGTAAAGCAGTAACAAAGAAAATGCTGCAGCTTAGCAAAGGATTTGCCATTGCAATGATTCATTTCTATCCTATAATAGGTTTTATTTCC-CTGTTTTGCAGTAATGCATTCGTTACATGCCCAATTTAAAGCAAAGTTAGCCACAGAATTCTGTATAAATATACTAGAGTGTCACTTGTCAGCTCATCTTGAACACTACATCAGCATGAACAAACTGGGTATCAGTGTAGCACAACAAC-CAATGT .:.......x...x.x.:.xx.:.x....:..---:.:...x:...:.x..--....:..:x.:.--.:.....:..xx..xx:.::.::....:--..::....:x..x.--.x.::.x.x.:...x..x.x.:x.x:x...:x..------:....:xx....:.x.x:.:..-------.xx.:..x:..:xx.:..x----.:....x....:::.:.::..x.---.:.:x:.:x::......x.....xx.x::.....x:....xx..:.:......-----.:.....:x:x:...x.x.-....::..:.:.:...:x.....x.........x.....:.:x.................x::...:..----------...x:........x.x:........x...::.....xx...x...............:.:..x.......x::......:............-.xx............:.....:..x.............x.x..:....:....x.....:.:x....:.x...--..:xx..:.:x.x...x..:.....xx:x:...:........-....xx..--...x..x..x.:x.:.x:...-...... 32M3D16M2I12M2D28M2D14M2D34M6D22M7I19M4D23M3I53M5D19M1D69M10D92M1D73M2I42M1I8M2I21M1D6M 400/583 68.6% 600/94230402 0.0% 54/583 9.3% 79119967 NA +3036 chr4 + 190214555 116370069 116370068 116370108 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 26548787 NA +3036 chr4 + 190214555 116370071 116370070 116370110 40 TGTGTGTGTGTGTGTGTGTATATATATATATATATATACA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......:...............:.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 26548789 NA +3095 chr4 + 190214555 116374894 116374893 116374949 56 TGCATATATATATATATATATATATATATATTTTTTTTTTTTCTCTCATTCTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .......x.....:...:..:.:........x......:.x.:.:.:x....x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 23639546 NA +10858 chr4 + 190214555 116379594 116379593 116379897 304 GAGATGAGGGACATACTTTAGAAATAAAAATAGTTTAGAATGAAAATAGTTAAGTAGACTGTTAAATTATTATTGAAATAGAAAGCATAGCGATAAAATTTAACTGAATGGAGTTCACTATCATTTGCCCTAAGGTAATGTTTTCATTTCAAGGTATATATTACATAATTGACATTAAAATGACAAAATGGATATTGTTCCAGTTGAGCAGATAAATTGGGA-AGATAAGAATTGTTATACA---------TTAAAAGTTAAATTGCTTTTAAAAATTTATTTCATCTCTGTATCATTTCAATCTACTCTCTCT chr4 - 94230402 37240650 37240649 37240952 56989451 56989450 56989753 303 GAGATGAAAGACATCTTGCAGAAATGAAAATGATTGCAAAT--------TTAATTAAAACATTAAATTATTGTTGGAATAAAGGTCATAATCATAAAATGTAATTGAAGAGAGTACATTAGCATGTACCCTAAGGTATCTTTTCTATTTCAAAATACATATTACATATTTGACATTTAAA-GAGGAAATGGGTACCATTTTATCTGGATGGATGAACTACGATGGTTAAGAATTGTTATACACAGTACAGTTTAAGAATCCAAT--ATTTCAAAAAATCATTTGCTCCTTGCTTAGGTGCAACATACTATTTTT .......::.....x:.x:......:.....::..xx:...--------....x..:.x::..........:...:....:.::x....::x.......x...:....x:....x..:..x...x.:..........x:x...::.......::..:..........x........x...-..x:......:..:::..::.x:..::::...:..:.:x..-:.x................---------....:.:.:x...--x...:.....x.:....xx..::..:x.x:x.x...:x....x.:.:. 41M8D131M1D41M1I19M9I13M2D48M 205/293 70.0% 303/94230402 0.0% 21/293 7.2% 79138944 NA +10776 chr4 + 190214555 116387560 116387559 116387907 348 ACATATGTATGTTTACAGATTGCTTCATTTATAGTAATCAAGTTTTTAAACCTCATAATTTTGATAGATAGACAAGAACTTTCCTTTTTTCTAGTTTGTACACCTATTGACATACTTCATTATTAGCTTCTAATTGGTTTTGATTTTGCATAGCTGTGAAACTTATTTAAATATGTTCATTATTTTCCTGCCAGGAGAAACAAAATTTAATTTAATTAGAGGTCACTACACTTCCAGATTGAGTTAATTAAAGATCTAATCAAGCCTCCTAGGAATAAGTAGATTGTCAGTTGGGGAAAATCATCACAGGCAAAACTCTAAAATCTACATTAAGGTTAATAGTTTTTT chr4 - 94230402 37266112 37266111 37266446 56963957 56963956 56964291 335 ATATACATATGATATAAATTTGCCTCAGTTTCTGCAAACAA-------AACCAGATTAATCTTATGACTA---AAGAATTTTTCTATAAAACCATTTTGACATTTACTGACAGCCTTCATTATTAGTTGCTATCTTGTTTGGAGTTTGT-TGTCTGTGAGTCTTATTTAAAGAAGTTCATTATTATACTGCCAGGAGAAACAAAATTAAGCTTAATTAGAGGTCGCATCACCTCCAGCTCAAGTTAATTAAAAGCCTATTCAAACCTTATGGGAAACAGTAACCCATCAGT--GAAAAAATTAAGGAGAATAGAGCTCACTGTACCACACTAAGGACAGTAATCTGTT .:...::....x.xxx.:x....:...x..x:x.:..x...-------....xx..x.x.:.x..::x..---.....:...:..x.xxxx:x:...xx...::..:.....xx............:.x...x:.x....x..x....:-.:x......:x..........x.x..........x.x....................x.::.............:.xx...:.....x.::...........:::...x....:...:x.:....xx....:x:::.....--.::.....:.xx:x::::.:.:...xxx:xx.:...:.....x:.:..:.:.x.. 41M7D22M3D76M1D141M2D55M 225/335 67.2% 335/94230402 0.0% 13/335 3.9% 79121448 NA +3486 chr4 + 190214555 116396382 116396381 116396486 105 CTGCAAAATATCTCA--AGCACTGATCTGATATATATATATATATATA-------TATATATATATATATATATATGTATATGTATATATGTATATATATGTATATAATATATA chr4 - 94230402 30587849 30587848 30587962 63642441 63642440 63642554 114 CTGTAAAGAATTTCACCAGTGTTCATTTTTTGAATGTAAATAAGTATACAAATTTTATCTCTATATTTTAATATATGTACATGGAGATATGTGTATAGAGGTATATAATGCATA ...:...:x..:...--..:::.x..:.xx.:x..:..x...x:....-------...x.x.....x.xx.........:...x.x......:....x.x.........::... 15M2I31M7I59M 75/105 71.4% 114/94230402 0.0% 9/105 8.6% 85808533 NA +3172 chr4 + 190214555 116396410 116396409 116396481 72 TATATATATATATATATATATATATATATATATATATATGTATATGTATATATGTATATATATGTATATAAT chr4 - 94230402 65232551 65232550 65232622 28997781 28997780 28997852 72 TATTGATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGACTACAGT ...xx..x..........:...:....xx.:xx...:......:......x.x....:...:..xx..:.:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 51163859 NA +3100 chr4 + 190214555 116396416 116396415 116396486 71 TATATATATATATATATATATATATATATATATGTATATGTATATATGTATATATATGTATATAATATATA chr4 - 94230402 37363040 37363039 37363110 56867293 56867292 56867363 71 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTA .:.:..:...:x.:......:..::.:.x....:.xx:.......:.....:...x:::.:.:.....:.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 79033376 NA +3405 chr4 + 190214555 116396493 116396492 116396554 62 TGTATATGTATTG-----TGTGTGTGTGTGTATATATATATATATATATAGTATGTTTATATAATAG chr4 - 94230402 92830149 92830148 92830215 1400188 1400187 1400254 67 TGCATAGCTATTGCAAAATGTGTGTGTGTGTATATATATATATATGCTTGGTATGTTTTCATGAGAG ..:...xx.....-----...........................::x.:........x:..:.x.. 13M5I49M 51/62 82.3% 67/94230402 0.0% 5/62 8.1% 23566344 NA +3001 chr4 + 190214555 116396496 116396495 116396550 55 ATATGTATTGTGTGTGTGTGTGTATATATATATATATATATAGTATGTTTATATA chr4 - 94230402 61428348 61428347 61428402 32802001 32802000 32802055 55 ATAGGTGTTGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTA ...x..:....:......:..:....:.......:.:.:...:.x.x..x..:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 54968148 NA +3153 chr4 + 190214555 116396503 116396502 116396550 48 TTGTGTGTGTGTGTGTATATATATATATATATATAGTATGTTTATATA chr4 - 94230402 19559295 19559294 19559342 74671061 74671060 74671108 48 TTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATA ...............................:.xxxx..x...:.... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 96837208 93377347 +31764 chr4 + 190214555 116398508 116398507 116399211 704 ATTGTTCTGTTA-----ACTAAAAAGTAATTTTACTGTCAATAAGCAATAGGTGACACAGCCAATATTTATTTTATTCTACTTTAAATTTAGAAGTGAAAACTTATTTTCCCAAAGGAATGTCTTCTTGAAAAGTGTGTTTTCATTTTAAAAATTACATTTGTAC------CTAAGATATTAATGTGGAAATCATGATATTAAATAACA---------GTTCTAAAATTGTAATGGGGATTATGATTTCATAAGAAGAAAATTATTTATGGAGGTAACGTTATTGTATAATTTCCTATGGGATCTCTACATCAGGGCTGGTTTTATTAGATCCTAAAACAA-GTCACCTACATTCACTTTAGGATATAAAGTAATGTTAAAT----TAATATTGCAAAGCAGTTCACAGTGTGAGCAAAGACATCTGTTTATGTTACCATAAATAGTTATGAACTGAGGAGCTCAAATGGCTTTGCCAGCAAAGCATTGCCTCCTAATTTATTTTTATAGAAAATGGAAGCCTCATTTTTCATGATTGGGTAGTTTGCATTCAAATGTACAAGTAACTTCAAATGCAATCACTTTTACACAGCATGTTTTATTGCAGAGCCATAGGATGAAATTGCTAATGGTCTCTTGTGGGGTAGTCATGTTCTCCGATGAAAATTTTAT-------TTTATTTCATAATATTTTTAAACTTAATTTCAAAATTGAGATTCACTTCTTTAGAAA chr4 - 94230402 37281715 37281714 37282433 56947970 56947969 56948688 719 ATTGCTCTGTTAGGAGCACTAGG--GTACTTTTACTACCCTTGAACAACATACAGTACATTCAGCATCAATTTTATTCCCCTTTTAATTTAGAAAGGAAAACTTATGTTCCCCAAGGTACGGCTCACT-----------TTTCATATGAAGTATTGTATTTCTCTGATTTATTGAGATATTAACATGGAAATGGTGATGTTAAACAATACTTGGAATAGCTCTAAAAGTGTAGTGGGAATCATGATTTCGTAAGAAGAAAATTAGTTATGTAGGTAACATTATACAATAATTTCCCATAGGATCTCTACATCAGGCAAGATTTTATTATATTCTAAAACAAAGTTGCTTGCACTCACTTTAA-ATATAAAGTACTGCTGAATAGGGCAATATCATAAGGCAGCTCACAGTACAAGCAAAGACATCTGTTAATGGTACCATGAATAGTTATGAACTGTGGTACTCAAACAGCTTTGCCAGCAACGCATTGCCTCCTAATTTATTTTTATAGCAAATGGTTGCCTCATTTTTCATGGTTTGGTAGTTTGCATTCAAATGTATGAATAAGTTCCAAGGCAATAGCTTCTGCACGGCGTGTTTTATTTGAGAA-CATAAGAGGCAATAGCTAATGGCATGTTGGTGGGTAGTCCTCTTCTTTATCAGCAGTTTCATATGAATCCTTATGTTCTTTTTTTTTTAA--TTAGTTCATGAAAGGGAATGTGCTACATTAAAGA ....:.......-----....::--...x.......::.xx.:.:...:.x:::::...x:..::..:x.........:x....x.........:x..........x.....x....x.:.x..:x:.-----------......x.x..:x...::....x.x:------:.:.........::.......x:....:.....:..:.---------.:.......x....:....:..:........:..............x.....x.......:....xxx.........:..:................xxx.:........x..:.........-..::.:.:..:........:-..........x..:.:...----:.....:::..:....:.......:::................x...x......:...............x..x:......::.............x...........................x......xx...............:..x.....................::.:...x...x..x.....x:...:.:...:..:.........xx...:-....:..x.x...x........:x.x...xx........x.x....:::x:::x.:...:..-------:....x.:x.xx.x.......--...:..:xx:..xx.::..x::..x.x...:.:. 12M5I6M2D103M11D26M6I38M9I123M1I20M1D19M4I223M1D62M7I21M2D34M 522/687 76.0% 719/94230402 0.0% 49/687 7.1% 79116793 NA +3445 chr4 + 190214555 116414796 116414795 116415011 216 ATATATATATACACACATACACACTGTCATATGTATGCCTGTGTATATATATACATATATATACAAATATATATGTATATATATTTATCAGCTTATATATATCAGCTTACAGATTTATATGTATATATACTGTCAAATATAT--ATTTATATAT--ACATTATATATAAATGTGTATATAATGTCAGCTTACAAATCACTATGTAAATAAAAGATGCACA chr4 - 94230402 17520749 17520748 17520941 76709462 76709461 76709654 193 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC---CCCACTGGTCTAT---TCCATCAG-------ACAACAG----TAGTTTTATTTTTAATTACTCTGTTAATTGCCTTCATTTGTATATCCACATTTTATCTACATAC-----TGCTGAAAGC-----AATCACAGTGTAACAACGAGAAGTACA .:.x.......x.....x.:....xxx...:..x....:...:..x.:.:..:...........---:x:.:xx..x...---.::.....-------.:.x...----:..x.....x.x..xx..:x....:..x.::x.--....:.....--.....x...x..x..::-----.:x..xx...-----......x:.....xx.x:...x.:... 64M3D13M3D8M7D7M4D33M2I10M2I17M5D10M5D27M 131/189 69.3% 193/94230402 0.0% 31/189 16.4% 98894047 91320508 +3893 chr4 + 190214555 116429922 116429921 116429988 67 TTTCTGCAGAATTGCTGTAAAATGTTCTCCTAATAGCTGTTTCTCCACAAAAGCAATCAGTGATTTC chr4 - 94230402 77695340 77695339 77695406 16534997 16534996 16535063 67 TTTCTGGAGAATGGCTGTTAAATGTTCACCTAGAAGTTGCTTTTCTACAGTAGCAATTAGTGGCTTC ......x.....x.....x........x....:x..:..:..:..:...:x......:....::... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 38734582 NA +3515 chr4 + 190214555 116430321 116430320 116430396 76 CCAGACAGAAGGAAGGCTGGAGCTCTGATGTACAAAAGTGTGATTAAAAAACAAGAAAATGCTTCTAATCATGATC chr4 - 94230402 77698160 77698159 77698235 16532168 16532167 16532243 76 CCAAATAGATGGCAGCATCGAATTCTGAAGTACGTACGTTCGGTCCAAGAACAAAAAAATACTTCTAATCATAATC ...:.:...x..x..xx.x..::.....x....:x.x..x:.:.:x..:.....:.....:...........:... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 38732161 NA +3097 chr4 + 190214555 116430943 116430942 116431019 77 TATATGTATATATGTATATATGTGTGTATATATATGTATGTATGTATATATGTATATATATGTATATATGCATACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT ..:...x.....x.::..:....:......:...:.:.::..:xx.....x::x.....:...:.x...::.xx... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 63949707 NA +3211 chr4 + 190214555 116430952 116430951 116431007 56 ATATGTATATATGTGTGTATATATATGTATGTATGTATATATGTATATATATGTAT chr4 - 94230402 51294136 51294135 51294191 42936212 42936211 42936267 56 ATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCAT .....::...x......:.:.:x.:::..........x:..........:...:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 65136816 NA +3265 chr4 + 190214555 116430954 116430953 116431036 83 ATGTATATATGTGTGTATATATATGTATGTATGTATATATGTATATATATGTATATATGCATACATATATGTATATGTGTGTA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:.:........:...x.:......x..::...:....:x..:..xx:..:.:.::..:...:.:.x::.:.x:..x:.. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 108035166 82179389 +3295 chr4 + 190214555 116430973 116430972 116431048 76 TATATGTATGTATGTATATATGTATATATATGTATATATGCATACATATATGTATATGTGTGTATAT------GTATACATG chr4 - 94230402 17853465 17853464 17853546 76376857 76376856 76376938 82 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCATG ...x...x.:....:.:.........:.:.x...xx.x..:..:....:......x.x..::...:.------....:.... 67M6I9M 56/76 73.7% 82/94230402 0.0% 6/76 7.9% 98577508 91637047 +3128 chr4 + 190214555 116451390 116451389 116451458 69 AAAAAAAAAAAAAGGAGAAGAAGAGAAGAGAAGGAAAGAAAATAAAATGTACATTCCAAAGATGCTATA chr4 - 94230402 70534415 70534414 70534483 23695920 23695919 23695988 69 AAAACATAGAATAGGAGAAAGAGAAAATAAGCGAAAAGAAAGAATAATATATATTTCAAAGATGATTTA ....x.x.:..x.......::...:..x.::x.:.......:x.x...:..:...:........x.x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 45916975 NA +14909 chr4 + 190214555 116460678 116460677 116461054 377 TTCAATAAACATATGAAAGGATACCACACTTTATCAATAGTAACACCAATACCACGTTTAATGGGATGATGGCTTATTAATTTCTCTAATAGATGGTAACATCGGGATGAACAAGATTTATTATGTTAGTCAAATTAAAGATGCTTGTGATGAACACAGAATCTTAACTGTCAGTACCTGCACAACAAACTTTATTAAGTGGTATGTTGTTGAAAATTATTTAAATGAGAAGATAATGAAGCAAAACTCTTGAAATATGTTTAGCATAATTAATTCTGAAAAGTAGGGAAGTTCATTAAAGCTAAGAAAATAGTTTCCCATTTTAAAAAACATATTTTAAACCATTTAAAGTACTGCATTAAAAT----GACTCAAAAGAA chr4 - 94230402 37325970 37325969 37326325 56904078 56904077 56904433 356 TTCTATAATGCTGTGAAAGAAAA--ATTCTTTATAAACAACATCTAGCAGAGAGAATTTAGCTGGATGATGCCTTGTTAATTTTTGTAATAGATGGTGACATTGGCATGAATAAGATTTATTATGTTAGTCAAATGAAAG-TGCATGTGCTGAATGCACAAGTTTAACTGTCGGTACCTGCACAACAAACCTAATTAAATGGTGTGTCATTGAAAATGATTTAAATGAAAAGATAATGAAGCAAATCGCATGAAATGTGTT------------TCCGAAGGAATCGGAAAGGTTATTGTAATTAGAGAAGCAGTCCTCCATGTTAATAATC-TTTTTTAAGCTCTCT---------CATTAAAATCTAAAGCTTaaaaaaa ...x....xxx.:......:.x.--.:x......x..:.::.x.xxxx.x.xx:x:....::x........x...:.......:.x...........:....:..x.....:.......................x....-...x....x....::..x..x:.........:.................:.x.....:....:...::........x..........:................x.x.x......:....------------.:.x:.::.:.x..:...x.:...:x.::..:::..::...:::....x....x..x.-.x......:.:x.:.---------.........----::..:....:.. 23M2D115M1D120M12D58M1D15M9D9M4I12M 262/352 74.4% 356/94230402 0.0% 29/352 8.2% 79134708 NA +3940 chr4 + 190214555 116487067 116487066 116487299 233 CTGCAGCCTTGACCTCCCAGACTCAAGTGATTCTCCTACCTCAGCCTCTCAAGTAGCTGGGACCATAGGTGTGCACTACCATGCCCAGCTCTTTTATT-TTTTATTTTTTTTCTAGAGATGGGGTCTTA--CTTTGTTGCCCAGGCTTGTCTCATC-CTCAAGCAATTCTCCTACGTCGGCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCAGTGCACC-CAGCCTCCTTTACTTT chr4 - 94230402 18197126 18197125 18197352 76033051 76033050 76033277 227 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTATCATCCTTTCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCCT--TCTGCCCTCCTCTTTCAGTCTACTTCCTCAAATCAGGTTCCCAATGTCCT-------CAAATGCATACCTGGGTACTACAGCTTCCCTTTCCCT ..:.....:x:.x..:.::.::.......x...x.xx:x........:............:..:.:.--:......:..::..:x:x:::....:..x-:x...:x.x:....:x:.:x::..x:.:..--....::....:--x..xx:...x..-:...:x.x.:.::.::.x:..:.xx......x..x..-------..:::.::x:..x.x.:..:-....:...:..x.::. 67M2D29M1I30M2I11M2D12M1I37M7D20M1I16M 133/222 59.9% 227/94230402 0.0% 16/222 7.2% 98289941 91924614 +3049 chr4 + 190214555 116499224 116499223 116499310 87 GCCTGAGCAACATAGTGAGACCCAGGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAA chr4 - 94230402 7711319 7711318 7711405 86518998 86518997 86519084 87 GCTTGGAAAGCATTCAGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ..:..::x.:...xxx..:.x::...xx.x....:x.:.....:..................xx::..x.::.:..::.::...:.. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 108787905 81426650 +3098 chr4 + 190214555 116499722 116499721 116499774 53 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAACTAAAAGAAA chr4 - 94230402 61919716 61919715 61919768 32310635 32310634 32310687 53 GTCTCCAAAAGAAAAAGAAAAATGGAGGGAAAAAAAAATAGAATCAAAGGAAA .....x....:.....:.....x::.:::...........:..::...:.... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 54580006 NA +3059 chr4 + 190214555 116501640 116501639 116501738 99 TATCCTTCCTCCCTCCCTCACTACCTACCTCTTTCTTTCTTTC-TTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTTCT chr4 - 94230402 32546768 32546767 32546867 61683536 61683535 61683635 100 TACTTTTTCTCCACTCCTTGATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT ..:::..:....x::...::x..:..x...x.xxxxxx.x.:.-.::........:..x:...........:::x.x..:..:..x:...........:. 43M1I56M 63/99 63.6% 100/94230402 0.0% 1/99 1.0% 83954872 NA +3155 chr4 + 190214555 116507383 116507382 116507441 59 ATATGTCATCTCATTGTCCATATTTTCTCATTTATTGCTCTAAAATTTTTCACATTTTA chr4 - 94230402 77856279 77856278 77856337 16374066 16374065 16374124 59 ATGTTTTATCTCACTCTTTATACTTTTTGATTTATTGCTGTAAAATCTTTGACATATTA ..:.x.:......:.x.::...:...:.x..........x......:...x....x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 38651104 NA +3756 chr4 + 190214555 116509502 116509501 116509701 200 AAAAAAAATCAGAAACACTGCAAACAGTTGAATTTTTCTTTCTTTCTTTCTCTTTCT--------------TTCTTTTTCTTTCTTTCT----------CTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCT--TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT---------CTCTTTCTTCTTTCTT chr4 - 94230402 18235141 18235140 18235367 75995036 75995035 75995262 227 AAAGAAAATCA-------TGTTAAGA-TTGTGTACTTCTTTCTGTTTTTCTCCTTTTCTTAACAAGTTGTATTCTCTTCATTGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTCTAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTTAGGTTTCTTATTGTCATGTTCATCCTACCTTCTT ...:.......-------..:x..x.-...x:.x:........x.:......:..:.--------------....:..:x..x.:.x..----------:.:...x..x:.x.:..:..xx..x:.....:...xx.x.:.....xx.......x.x:..:..--x.......::...::x..::..:x..:.:....::.xxx......---------:..x.:..x.:..... 11M7D8M1D30M14I18M10I64M2I45M9I16M 129/192 67.2% 227/94230402 0.0% 43/192 22.4% 98274361 91940194 +3710 chr4 + 190214555 116509513 116509512 116509693 181 GAAACACTGCAAACAGTTGAATTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTCTCTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCT chr4 - 94230402 52381252 52381251 52381425 41848978 41848977 41849151 174 GAAGCACTTTAAGTGATTG-------CTTTTCTTCTTGTATTTTTCTTCCTATTCCTCGTTGGTTTTTTTCATTCTACGTGGTGATTTCATTCTCAAACAGCTACTTTCTTCCCCTTTCTTCAGTTGCTTTGTTCTTTCCTGAGCTCATTATTTCTTTTTGCTTTTTAATCTTGGTTTCCT ...:....x:..::::...-------....::.....x:x:...::...:.x...:.:x..xx.:.:....x....x:x.xxxxx....x.....xxx:x.::x......::::.......:xx..x:..:x.......:.xxx:..x..x.......:.x::...:xx....xx:..:.. 19M7D155M 103/174 59.2% 174/94230402 0.0% 7/174 4.0% 64128261 NA +3738 chr4 + 190214555 116509551 116509550 116509715 165 CTCTTTCTTTCTTTTTCTTTCTT-----TCTCTCTTTCTTTCTCTCTTTATCTTTCTTTCTCTCTTTGTCTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTT chr4 - 94230402 77817347 77817346 77817516 16412887 16412886 16413056 170 CCCTTCCTTTCTTCTCCTCCCTCCAAAGTCTCTCCTTCTATTAGTCCTCCTTGCTCTCCTCCTCCAGAACTTCTCCTCATGCTTGCTTTCTTTCTCGCTTTCCAAATTGCTACATTCATCACTGTCGGCTTCTCCTTCTTTTATAAACTCCTTCAGTTTATCTTTTGCTT .:...:.......:.:..::..:-----......:....x.:xx..:.:x.:x:...::::...:xx:x..::.:...x.x...x..........:x.....:xxx..x..x:x..:x.:x..x..xx::.:..:.....:.x.xxx:..:...xx...x.:..:.x:.. 23M5I142M 97/165 58.8% 170/94230402 0.0% 5/165 3.0% 38692204 NA +3105 chr4 + 190214555 116509633 116509632 116509716 84 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTT chr4 - 94230402 45185583 45185582 45185666 49044737 49044736 49044820 84 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x.........:......x.:....x::...:..::..:... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 71324050 NA +3060 chr4 + 190214555 116509645 116509644 116509717 73 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTTT chr4 - 94230402 8439372 8439371 8439444 85790959 85790958 85791031 73 TTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTT ....xxx.....::.:x.x..::x....::....x:::.::::.::....:.................:.... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 108070273 82144282 +3123 chr4 + 190214555 116509653 116509652 116509718 66 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTTTT chr4 - 94230402 40193303 40193302 40193368 54037035 54037034 54037100 66 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTT ..x....x.::.....:...:.x.:.:..x..:...xx:....x:.:..........:...:.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 76316350 NA +3088 chr4 + 190214555 116509663 116509662 116509738 76 CTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTCTTTCTTTTTTTTTTCTTTTTTTTGACAGGGTCTTACTCTGTCA chr4 - 94230402 15963380 15963379 15963455 78266948 78266947 78267023 76 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGATTTATCTCTGTCA ......:.......:.....:::..:..xx..:...:....xx.:..:x....:..::xxx.:.:.xx........ 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 100546283 89668272 +3106 chr4 + 190214555 116524292 116524291 116524334 43 TCTGTCTCAAAAAACAAAAACAAAAACAAAACAAACAAACAAA chr4 - 94230402 4615243 4615242 4615285 89615118 89615117 89615160 43 TCTCTCTTAAAAAACAAAAACAAGAAACAAACAAACAAACAAA ...x...:...............:..xx............... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 111909049 78305506 +3229 chr4 + 190214555 116556880 116556879 116556931 52 CACACACACACACACACACACACACACACACATATATATATATATATTTTTT chr4 - 94230402 87372747 87372746 87372798 6857605 6857604 6857656 52 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ..x...........x.........:x:.:..:...:..::.........:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 29184133 NA +3067 chr4 + 190214555 116556887 116556886 116556940 54 ACACACACACACACACACACACACATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 33661791 33661790 33661844 60568559 60568558 60568612 54 ATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT .:.....:...........x.x.:......:....xx:.:.x.....:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 82895096 NA +31279 chr4 + 190214555 116610697 116610696 116611292 596 TTGTGTTTGTCACCTTACACATGTATGTATATTTTCTAATC-TCTTTGTTAACACTGCATTTCAGTGTATTTCTGTTGAGGTTTTTATTTATGTTTTGGTATAACTACATATTT-TTAAGAAGTGACCTTTTGATTTGACTGTTTAGCTGACCTTAATGCTAATAAGATGG-GGATGAGGTTTCTAATGAA-CTTGTGTATGGGAATAATGATAGATGGCTTATTTGGAATTCTACAGATGCAGCACTGCCAAGCCTGCTGAGGAGTCTTTGGA-----TCCTCATTTAGAGAACG--GTTTTATTGATTACACACAGAGAGGGAACTTTTTAATCATTTTTATG-CACTGTATTGCCTGAGGTAACAAAAATCCATTAAACAAGGATTATAAACTTTGTTTTAAACTAGATCCTAAATTGTTCCTTGATACATAGTCAACATAGGCTCTATAAGATCAATCACAGTTACTAAGGCATATTAAAATCAACTTGTTTAATTTTAATTGCTCATATGCCTGACCCTCTGAGGTGTAAGTGCTCATGAGGCTAAATTACTTTTCTCCCAGACAGGAGTTTCATTTTAGGTT----TGGGTTTTTTACCTGCTATA chr4 - 94230402 37456119 37456118 37456725 56773678 56773677 56774284 607 TTGCATTTCATGTCTTGAATGTCTCTGTCAGTCTTTTATCCATCTCTGCTA---CTGTATTTTGACATATATCTGTTAAGATTTTGATGTATGTTTTGATCTAACTGCATGTTTGTTAATAGGTGACCTTTTGCTTTAATTGTATGGCTGACTTCAGTGCTAATAAGCTGAAGGATGAGATGTCTAATGAGTCTTGTGTATAGAAATAATGATAGATGACTTATTTGGAATTCTACAGACACAGCATGGCCAAGCATGCTGAGGAGCCCTTGGAAATGAGCCAATCTTAGAGTGGGAAGCTTTATTGATTACACAGAGATAGGGCACGTTTTAATCATTTTTACAACACTGTACTGCCTTAGGTA-CTAAAATCCATTAAATAAGGAGTAAAAGCTCTGTTTTAAACTGGATCCCAAATTGTTTCTTGATGTACAGTCAACAGCAGCTCTGTAAGATCAATCACAGTTACCAAGGCGTATTTAAATCAACTTGTTTAATTTTAATTGGTCATATTCCTAACCCTCTGTGA-GTAGCTGTTCATAAGGCTAAATTGCTTTCCTCTCAGACAGGGGTTTCATTTCACTTTGTGGTAGTTCTCTTTCCTTTTACA ...::...xx:::...:x.::.x.x...xx:.:..:..x:.-...:..:..---...:....:::::...x......:..:....x..x.........:.x.....:...:...-....x.:...........x...:.:...x.:......:.:.:..........x..:-.......:.x........:-.........:.:..............:....................::.....:x.......x..........:.:.....-----x..xxx:......x:x.--.:...............x...x....x..x...............::-.......:.....x.....-.x.............:.....x..x..:..:...........:.....:........:......::.:........xx:.....:...................:.....:....x.........................x......x...:........x.:-...:x..:....:..........:....:...:........:.........:.xx..----.:.x.:.:..x...x:..:. 41M1I9M3D60M1I56M1I19M1I82M5I17M2I47M1I19M1D164M1D57M4I20M 469/591 79.4% 607/94230402 0.0% 21/591 3.6% 79154578 NA +3265 chr4 + 190214555 116615247 116615246 116615300 54 GAAAGAAAGAGAGAGAGAGAAAGGGGAGGGAGGGAAGAAAGAAGGAAGGAAGGA chr4 - 94230402 19799669 19799668 19799722 74430681 74430680 74430734 54 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA .....:..:.....x..:...:........:::...:..:...::..::..... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 96815578 93398977 +3174 chr4 + 190214555 116615446 116615445 116615495 50 AAGAAGGAGGGAAAGAAGGAAGGAAGAGAGGGAGGAAGGAAGGAAGGAAC chr4 - 94230402 47169728 47169727 47169777 47060626 47060625 47060675 50 AAAAATGAGGAAAAGAGGAGAGGAGGAGGGAGAGGGAAGAAGGAAGGGAC ..:..x....:.....:.::....:...:.:....:.:.........:.. 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 69445718 NA +3178 chr4 + 190214555 116615729 116615728 116615808 80 AGAAAGAAAGGAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAGAATAAGAAAGAGAGAAA chr4 - 94230402 10903375 10903374 10903454 83326949 83326948 83327028 80 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGA ......:.:::.::.....x...:.:.x:x..::.x...:xx...x......:........:.:::x.......x.:.:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 105712354 84502201 +3038 chr4 + 190214555 116687934 116687933 116688022 89 TATAATAAAAAAATAAATAAAAATAAAAATAAAAATACTCTAACAGTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATCCCAGG chr4 - 94230402 65335683 65335682 65335771 28894632 28894631 28894720 89 TATTAAAGAAACATAAGAAAAAATAAAATCAGAACATCTCAGAATTTGGCCGTCAAAAAAAAAAAACAAAAAAAAAACAGCATTTCAAG ...x.x.:...x....:x..........x:.:..xxx...x:.xxx.xx:.:xx............x...........:.x..::..:. 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 51352251 NA +3060 chr4 + 190214555 116687937 116687936 116688005 69 AATAAAAAAATAAATAAAAATAAAAATAAAAATACTCTAACAGTTCTCAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 86725022 86725021 86725090 7505313 7505312 7505381 69 AAAAAATAAATAAAAAAAATCAAATGCATAACCACTCTGTCAGATATCACAAAAAAAAAAACAAAAAGA ..x...x.......x....x:...x::.x..x:.....:x...x.x...x...........x.....:. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 29962915 NA +9976 chr4 + 190214555 116692811 116692810 116693102 292 CTTTGGCAATGTTAGAGTTGAATCTATGGAAAATA--AAAAAAGCTTGTAATGAAACATAA-GTACTTGTGACAAAAGACATCATGGGCAGTTTTATGACAAAAAGACTGATACTTAATCACCTGAAGCTGCTTTTGTAGCCACTGCTGAGGCATGGTAGCATCACAGTCAGGGAGCAGGATGCCTGTCAAGATTGCAGTAAAGCAAACGGAATCACTGCCAATGCACTGCCTGTGGACAGCAGGTGAGCCTCATACCTTATTTATTTTATTTCTGTACCTTTTGATCTTGTGTT chr4 - 94230402 37508448 37508447 37508737 56721666 56721665 56721955 290 CTGTGGGAATTTCATACTGAGGTCCAATCAATATAGGAGAGAAACTTCTAATAAGACATAATGTAGTTGTGAGACAAGACATCACAGGTGATTTCCTGAAAGAAAGAGTGAGATTTAAGCACTTTTGGCTACTTCTGCAGCTAGTGCTGAGGCACGTTATCTTTTCTGTCAGAGAAGGAGATGATTTTCAAGACTGTAATCAAGCTA----AATTGCTGCCAACCATTTGCTCACAGACAACTGATGATTCTCATAGACCATTTGTTTTATTTCTGCACATTTT-ATCTCGTACT ..x...x...x.:.x.x.x:::..:.xxx..x...--.:.:..:...x....:.:......-...x......x.x.........::..:::...:x...x.:.....x...x.:....x...:.xx:...:...:..:...:.x..........:.x..x.x.:x.x.....:..:x::....x:.x......:..:.:.x....x.----...::.......:xxx:...:::::....:.x.:...x:......xx::....:...........:..x....-....:..::. 35M2I24M1I145M4D73M1D10M 194/287 67.6% 290/94230402 0.0% 8/287 2.8% 79184363 NA +3002 chr4 + 190214555 116716601 116716600 116716669 69 GCATTTTTGTCTGTGTTCCTGAGCAAGTTCTTTGACCTCTCTTAGCATCAATTTCCTTTTTGTAAAATG chr4 - 94230402 41206409 41206408 41206477 53023926 53023925 53023994 69 GCAACTTTGTGTGTGTCCATGAACAGGTCCTTTAACCTTCTTGTGTTTCAGTGACCTGTTTGTAAACTG ...x:.....x.....:.x...:..:..:....:....:::.xx.:x...:.xx...x........x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 75510192 NA +11698 chr4 + 190214555 116803954 116803953 116804327 374 TGTAAGTTGAAAAATAACATTAAATCATTTAGAACC--TACTAAAATT-ATAACTATATATTGTTGATTGTGATGGAAAATTACTTCATTTGGGATTAGTTATACAATATTATAGAATGAAGGGTATCTTTTAGAAAGAAAAATACTTACAGATTTAATTAAAATACTAAATTA-AGATAGAAGCAAAGTTATAATCATGAAATTAAATTGAAGAGACTAAATTAGAATACACTGTAATGTATTTTTGC---TTCAAATTATATACTGCATATTTGATATGTAAAGGAGCATCAGGTATCACTTCAT--------------------------------TTATAAACTGTAAAATGTAAGGACTTAATTTTTTCAAAAACAA--TACTTCTTTC-TATATGTAATCTACTGTCTTT chr4 - 94230402 37240545 37240544 37240952 56989451 56989450 56989858 408 TGAAACATGAAAGATCATCTTAGACTCCTGAAAAATGTTATTCAAATTTATTGTTAGATATTGCTGATTGTGATTGAAAGTCACTTCATT--AAATTA------CAGTACAGAGAGATGAAAGACATCTTGCAGAAATGAAAATGATTGCAAATTTAATTAAAACATTAAATTATTGTTGGAATAAAGGTCATAATCATAAAATGTAATTGAAGAGAGTACATTAGCATGTACCCTAAGGTATCTTTTCTATTTCAAAATACATATTACATATTTGACATTTAAAGAGGAAATGGGTACCATTTTATCTGGATGGATGAACTACGATGGTTAAGAATTGTTATACACAGTACAGTTTAAGAATCCAATATTTCAAAAAATCATTTGCTCCTTGCTTAGGTGCAACATACTATTTTT ..x..xx.....:..x.:x...:.::x:.x.:..x:--..:.x.....-..x::..x......:..........x....:.:........--::....------..:..:x:x:::.....:.::.....x:.....x:.....:x..:..:............:.:.......-x.x.:...xx..:..:........:....xx...........x..x.....x..::..:x...x....:...x.---......x..:...:.:.........:..x.....::.x.x::....:..:..:..--------------------------------.....x..x...x.:.x....:.:::...x...:x.....:x.--.:..:...x.-..x:..:..:x....:.:... 36M2I10M1I41M2D6M6D70M1I74M3I55M32I43M2I10M1I21M 258/366 70.5% 408/94230402 0.0% 50/366 13.7% 79563409 NA +3013 chr4 + 190214555 116834866 116834865 116834919 54 CACAGCCAAAAAAAAACAAAAACAACAACAACAACAAAAAAAACAAAAAAAAAA chr4 - 94230402 38842330 38842329 38842383 55388020 55388019 55388073 54 CAAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACAGACAAACAAAAAA ..x.:.x.........xx:..:..:.....:........x.:.....x...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 77992536 NA +3164 chr4 + 190214555 116834874 116834873 116834920 47 AAAAAAAACAAAAACAACAACAACAACAAAAAAAACAAAAAAAAAAC chr4 - 94230402 75231118 75231117 75231164 18999239 18999238 18999285 47 AAAAAAAAAAAAAAGAACAACAACAACAAAAAACCCTAAAAAAAAGC ........x.....x..................xx.x........:. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 41603756 NA +3001 chr4 + 190214555 116839644 116839643 116839683 40 TGCTTTCTTTTTTCTTTTTTAGTTATATAATTTCCTTTCT chr4 - 94230402 10527505 10527504 10527544 83702859 83702858 83702898 40 TGCTTTTTTTTTTCTTTTTCAGTTATGTACTTTCTTTTCT ......:............:......:..x....:..... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 106312139 83902416 +3142 chr4 + 190214555 116843927 116843926 116843993 67 CACACACACACACACACACACACACACACACACAAATTAGTAAGGGCAACAATAACAAAAACACTGA chr4 - 94230402 67973311 67973310 67973377 26257026 26257025 26257092 67 CAAATACACAAATACACACACACACAAAAAAAAAAAAAAGACAGGACAAGAGCCACAAAAACACTGA ..x.:.....x.:.............x.x.x.x...xx..xx...:...x.::x............. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 48870616 NA +31232 chr4 + 190214555 116856259 116856258 116856911 653 GTATTTTTGGTGTAAACAAGCAACATATAACATCTTTAACATTGACTTTATATTACTTTTAATTTAGAAGTAAAAACTTGTTCTCCAAATAGAATGTTGTGTTTCTTATATGAAATTTTGTATTTGTGTAACTTGCTGAAACGTTAATATGGAAATGATGATGTTAAACAATACTTTTGATAACTCTCTAAGTGTAGTAGGAATCACGATTTCTGAAAAAGAAAATTAGTTATGTTGGTAAGATTATTGCATAATTTCCCACAGGATCTCTATATCAGAGTTCTTTTTATTATCACTTAGAAC-AAGTTGTCTACGTTCATTTTAAATTTAAAGTAATGCCAAATA---CAACATCATAAGGCAGCTCACAGAACAAGCAAAGACATCTGTTAATGGTACCATGAATAGTTATGAACTGTGTTACTGAAAAGCCTTTGCTAGCAAAATATTGCTTCCTAATTTA-TTTTACAGC-AATGAAAGCCTCATTTTTCATAGTTTTGAAG-TTGCATTCAAATATTCCAATAA-TTTCGATGCAATCACTTCTATACAGCAAATTTTATTACAGAATATAAGATGGAATTGCTAATGTTCTCTTGATTGATAG----CTTCTCCATCACCAGTTTTTTTCTTACCCTT---TTCTTGCTATTTTAAT--GTTCA chr4 - 94230402 37281738 37281737 37282407 56947996 56947995 56948665 670 GTACTTTTACTACCCTTGAACAACATACAGTACATTCAGCATCAATTTTATTCCCCTTTTAATTTAGAAAGGAAAACTTATGTTCCCCAAGGTACGGCTCACTTTTCATATGAAGTATTGTATTTCTCTGATTTATTGAGATATTAACATGGAAATGGTGATGTTAAACAATACTTGGAATAGCTCTAAAAGTGTAGTGGGAATCATGATTTCGTAAGAAGAAAATTAGTTATGTAGGTAACATTATACAATAATTTCCCATAGGATCTCTACATCAGGCAAGATTTTATTATATTCTAAAACAAAGTTGCTTGCACTCACTTTAAATATAAAGTACTGCTGAATAGGGCAATATCATAAGGCAGCTCACAGTACAAGCAAAGACATCTGTTAATGGTACCATGAATAGTTATGAACTGTGGTACTCAAACAGCTTTGCCAGCAACGCATTGCCTCCTAATTTATTTTTATAGCAAATGGTTGCCTCATTTTTCATGGTTTGGTAGTTTGCATTCAAATGTATGAATAAGTTCCAAGGCAATAGCTTCTGCACGGCGTGTTTTATTTGAGAACATAAGAGGCAATAGCTAATGGCATGTTGGTGGGTAGTCCTCTTCTTTATCAGCAGTTTCATATGAATCCTTATGTTCTTTTTTTTTTAATTAGTTCA ...:....:x.::xxx::.:.......:.::.:x..:.:...::.:.....x::x..............:x:.......:.x:...xx.x:.x.:.x:x:::..:.:.......:.x........x.x.:.:..::...:.::....:.........:..................xx:...:....xx.........:.......:......xx..:.................x.....x.....xxx...........:..........:.....:xxxxx.........xx::..:...-......::.:.::...:.......x.......x...::....---...:...................x................................................x....x...x:x......:.....x::.....:..........-.....:...-....:xx..............:....x.x..-............:.x:x.....-..:.:.x.....x:.....::..:..:x:.......xx....:......x.x...x.......x:x.x...:.x.:...----.....::....x......:x.x:xx.:....---.....x:.x.......--..... 303M1I42M3I115M1I9M1I31M1I22M1I79M4I31M3I16M2I5M 496/653 76.0% 670/94230402 0.0% 17/653 2.6% 79574521 NA +3073 chr4 + 190214555 116862497 116862496 116862580 84 ATAAATGTATACGTACATATACACACACACACACATACACATACCCACACACTAGCCTGTGTAATATGCATATAGACACTAGCT chr4 - 94230402 10913798 10913797 10913876 83316527 83316526 83316605 79 ATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCACTCCCAAGACTG-----CATGCATCTCACCATTGACT ..:x......::.......x...:.:............x.x:.:....x.x.x..x...-----:......x.x:x..:.::.. 59M5D20M 56/79 70.9% 79/94230402 0.0% 5/79 6.3% 105948699 84265856 +3190 chr4 + 190214555 116897672 116897671 116897731 60 TTGGTTATTTTCTTTTTTTGTTTTGTTTTATTTTGTTTGTTTGTTTGTTTGTTTTGGTTG chr4 - 94230402 83500069 83500068 83500128 10730275 10730274 10730334 60 TTGGTTTTTATTCTTTTTCATTTGGTTTTATTTTGGTTGGTTGGTTGGTTGATTTTGTTG ......x..x.::.....::...x...........x...x...x...x...x...x.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 33397603 NA +3090 chr4 + 190214555 116910990 116910989 116911043 54 TAAGTTCCTTTCTTTAAAAAAAAAAAAAAAAAAAAGGAAAAAGGAAACAAGTGA chr4 - 94230402 16896771 16896770 16896824 77333579 77333578 77333632 54 TAAGTTCTGTACTTTAACAAAAAAAAAAAAAAAAAGGAAAGACAATATAATTAA .......:x.x......x......................:.x:.x.:..x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 100014219 90200336 +4005 chr4 + 190214555 116923940 116923939 116924116 177 GTGTGTGTTTATATATATACACATAAGTATATATACATAAGTATATATGTGTGCATATATATAAATAAATATATATGAGTATATATAAATAAATAAATTTATATATATACTCACATATATACACACACACACATATATATACACACACTCATTTTATATATATATTCACTGTATATA chr4 - 94230402 73121101 73121100 73121249 21109154 21109153 21109302 149 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGT------ATAGGTACACGAGTATATGTGAGTACATATAAAT----------------------ACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACA .....::.x:....x:.........x::.:.x.x:...:....:...:..------...x:..x.::.:.....:......:........----------------------..::x:.:.x.x.......::....x::.x.:x:x..:.....x:.x...:::...x:x:...:. 50M6D34M22D65M 96/149 64.4% 149/94230402 0.0% 28/149 18.8% 43802839 NA +3695 chr4 + 190214555 116932239 116932238 116932311 73 AAAAGAAAAAAAGAAGAAGAAAAAATAAACTATATGTCTTTTAACAGTCTATTTTATTTGAAGAAATTTTCCC chr4 - 94230402 54585559 54585558 54585631 39644772 39644771 39644844 73 AAAAGAAAAAAAGAAGAAGAAAAAAAAAAGTACATGCTTCTTAAAATGTTAATTTCCTCTAAAAGATTTCCTC .........................x...x..:...::.:....x.xx:..x...x:.:x..:.:....:.:. 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 62346680 NA +3196 chr4 + 190214555 116938113 116938112 116938176 64 TATGTGGGTATATATATATACACACACATATATATGTATAT--ATACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395860 85834543 85834542 85834608 66 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ......x.:...x.:..:..:x:...:..:...::x..:..--...................x... 41M2I23M 49/64 76.6% 66/94230402 0.0% 2/64 3.1% 108542318 81672237 +4131 chr4 + 190214555 116938114 116938113 116938223 110 ATGTGGGTATATATATATACACAC------ACATATATATGTATATATACACACACACACACACACACAGAGGCACACACATATA-----CATACTGTATCATTATAAACAAGGTAGATGT chr4 - 94230402 8395788 8395787 8395908 85834495 85834494 85834615 121 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGGTAGGTAT .....x....:.:.::...x...:------......:....:x..:..xx.:...................x:..x.::x...x.-----..x...::..:x.x::...:.......:.:. 24M6I55M5I31M 78/110 70.9% 121/94230402 0.0% 11/110 10.0% 108542326 81672229 +3131 chr4 + 190214555 116938122 116938121 116938162 41 ATATATATATACACACACATATATATGTATATATACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x......:...................:.x....... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 71666434 NA +3042 chr4 + 190214555 116938380 116938379 116938425 46 GCTCTTGAGTGTGTGTGTGTGTACATATATATACATATATATATAT chr4 - 94230402 9151848 9151847 9151893 85078510 85078509 85078555 46 GCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ...:..x...............::.......x.:..x.:....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 107786532 82428023 +3170 chr4 + 190214555 116960480 116960479 116960537 58 CCTTCCATAGGCATACTTCTTTTCTTTCTTCTTTTTTGATTATTTCATTTTCTTTTTC chr4 - 94230402 7586130 7586129 7586187 86644216 86644215 86644273 58 CTTTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTTTC .:..::x.x:..x.x:..........:........:.:...::........:...... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 109374350 80840205 +3131 chr4 + 190214555 116980163 116980162 116980204 42 TGTGTGTGTGTGTGTGTGACAGAGAGAGAGAGAAAAAAAAAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ...................x.............:.::..::. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 97997848 92216707 +3169 chr4 + 190214555 116995576 116995575 116995676 101 TATATATATATATATATATATATATATATATATATATATAAAATATAAGGTGTCCTTTCCAATTTATATAAAATGATAGAATTTAAATGTCTGATTATACA chr4 - 94230402 50291232 50291231 50291326 43939077 43939076 43939171 95 TGTATTTCCATATGTGCATATATACATATGTATATATACAAGGTAGGAGGTATCC------ATGCATATTAATTGTTCGGCTGTTACTTTATAAATATACA .:...x.x:....:.::.......:....:........:..::..x:....:...------..x:....x..x..x.x.:x.x.x.x.x.x.:.x...... 55M6D40M 65/95 68.4% 95/94230402 0.0% 6/95 6.3% 66704344 NA +3068 chr4 + 190214555 117045850 117045849 117045912 63 AATTTTAGGATTTTCCCCTTAATCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATGC chr4 - 94230402 18885329 18885328 18885391 75345012 75345011 75345074 63 AATTTGGTGATTTTCAGTTTATTCTTCCAGGAAAAAAAAAAAAAAAGCAAACAAAGAGAATAC .....x:x.......xx:...x...x.x.::...............:x...x...:.....:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 98160521 92054034 +3162 chr4 + 190214555 117059858 117059857 117059956 99 AGAGAAAAAATAACTAGAGAGAGAGAAAAAATAAATAGTAATGAATATTCTGCATTATAGAAGCAGAAAGCAAAACAAAG---AACAAGAAGTGTGAAATGA chr4 - 94230402 20861894 20861893 20861995 73368408 73368407 73368509 102 AGAGAAAAAAGAAACAAAGAGAAAGATAAGATAAATAGTCTCAGATATGACTACTTCAATGAGTAGAAAGCTAAAAAAAGTTAAGGAAAAACAATAAAATGA ..........x..x:.:.....:...x..:.........xx:::....xx:xxx..xx.x:..:.......x...x....---.:x..:..xx:.:...... 80M3I19M 67/99 67.7% 102/94230402 0.0% 3/99 3.0% 96197964 94016591 +3102 chr4 + 190214555 117095830 117095829 117095882 53 AAAAAAAAAAACAAAACGAAACAAAAAACAACAAAAAAAAAAACCTTTTTCCA chr4 - 94230402 18997565 18997564 18997617 75232786 75232785 75232838 53 AAAAAGCAAAGCAAAACAGAATTAAAAACAACAACAAAAAAATCCTTTATCTA .....:x...:......::..:x...........x.......x.....x..:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 98098265 92116290 +3203 chr4 + 190214555 117142629 117142628 117142693 65 TATATATATGTGTATATATACACAGATATATGTGTGTATATGTGTGTGTAGTTTAT-----ATATGTATA chr4 - 94230402 37363044 37363043 37363112 56867291 56867290 56867359 69 TACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTA-TTCACACACAATATGTATA ..:...:x...:....:..:....:......xx............:....-..:.:-----......... 50M1D5M5I9M 52/64 81.2% 69/94230402 0.0% 6/64 9.4% 79779585 NA +3258 chr4 + 190214555 117142742 117142741 117142811 70 ATATGTATATATATGTTTGTATATGTATACACATACATACACACATATATACACACACATATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..:..:........x.x..x.xx...x..:.:.:.:.....:...x.:.x...x.....:....x..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 93006549 NA +3051 chr4 + 190214555 117142768 117142767 117142816 49 ATACACATACATACACACATATATACACACACATATATATACACACATA chr4 - 94230402 7596413 7596412 7596461 86633942 86633941 86633990 49 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATA .....x..:......x.::...........:...:....:.x...:... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 109546355 80668200 +3126 chr4 + 190214555 117160525 117160524 117160580 56 CAGCCTTGTGTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGTGTG chr4 - 94230402 72884651 72884650 72884706 21345697 21345696 21345752 56 CAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGAATG ...:.....x::....:....:..........:.........:.xx..::..x:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 44275874 NA +3348 chr4 + 190214555 117191983 117191982 117192089 107 ACATTATTCTTTTTTCATGGCTGCATAGTATTCTATGATG-TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959521 32959520 32959628 61270775 61270774 61270882 108 ATACTGCTGTTCTCTCATTCCTGCTGAATGCACCATTTTGCTGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:.:.::.x..:.:....xx....xx.:.::x.:..xx..-..::xx.....::x.:.:::..x....x.....::...:.......:.......:.x......x:.. 40M1I67M 68/107 63.6% 108/94230402 0.0% 1/107 0.9% 84232462 NA +3023 chr4 + 190214555 117192037 117192036 117192091 55 TGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAC chr4 - 94230402 40286111 40286110 40286165 53944238 53944237 53944292 55 TGTGCTAATGTGTGTGTGTGTGTGTGCATATAAATTTAGAAACATAAGTATATAC ....:xx:..................:.....x..x..x.x.:...x:....... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 76905926 NA +3036 chr4 + 190214555 117192043 117192042 117192082 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 27370761 NA +3044 chr4 + 190214555 117192045 117192044 117192128 84 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACCACATTTTTTAATCCAGTCTATCATTGATGAGCTT chr4 - 94230402 70982629 70982628 70982709 23247694 23247693 23247774 81 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACA-CACATGGTCAAGTC--ATCTTGGATTGTTCAGCTT ...........:........:....:.x:...x..:.:.:.::.....-.....xx.:x.:..--:...xxx....x.x..... 48M1D14M2D19M 59/81 72.8% 81/94230402 0.0% 3/81 3.7% 46209416 NA +3015 chr4 + 190214555 117203829 117203828 117203892 64 ATGCACACCTGCTATGTACCCACAGAAACTAAATACTTAAAAAGTGACTTAGACTGAATTCAAA chr4 - 94230402 45815393 45815392 45815456 48414947 48414946 48415010 64 ATGAATAACCATTACTTGCTCGCAGAAGCTATCTTCTTAAAAAATGATTTAGACTAAAGTCAAA ...x.:.x.:::..:x.:.:.:.....:...xx.x........:...:.......:..x..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 71388436 NA +3392 chr4 + 190214555 117215119 117215118 117215177 59 ATATCGTGTGTGTGTGTGTGTGTGTATGTATAACATTTTTATATATATAACACATATAT chr4 - 94230402 20373290 20373289 20373348 73857055 73857054 73857113 59 ATAGTGAGTATGTGTGTGTACGTGTGTATATAATGCATCTATATATATTACACATATAT ...x:.x..:.........::....:.:.....:::x.:.........x.......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 96841829 93372726 +3094 chr4 + 190214555 117247836 117247835 117247883 48 ATCTTTGTGTATATATGTGTGTGTATATATATGTATGTATGTATATAT chr4 - 94230402 43600823 43600822 43600870 50629533 50629532 50629580 48 ATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT ..x.........x..::..........:....x...:..x........ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 73647013 NA +3185 chr4 + 190214555 117247873 117247872 117247920 48 TATGTATATATGTCTGTAGGTGTGTGTGTATGTGTGTATATATATATA chr4 - 94230402 4406424 4406423 4406471 89823932 89823931 89823979 48 TACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..:........:x:.:..:..........:.........x:....... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 112841449 77373106 +3311 chr4 + 190214555 117301060 117301059 117301134 75 ATATATGCATATATATATATATATGCATATATATATATATGCATATATATATATATATGCACATACGTACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:..:..:.:.::...x.:...:..x..:....:.....x..:..xx...:.:.::....:..::.x..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 108905272 81309283 +3013 chr4 + 190214555 117317337 117317336 117317392 56 GTGTGTGTGTGTGTGTATATATATACATATATATACACACACACACATATATGTAT chr4 - 94230402 47095164 47095163 47095219 47135184 47135183 47135239 56 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCAT .....:...........:.:.:......:..:...x..xx.:x..::.:....:.. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 70222173 NA +3002 chr4 + 190214555 117325853 117325852 117325914 62 ATTTTTTTCTTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTAGATCCACAGAG chr4 - 94230402 76538993 76538992 76539054 17691349 17691348 17691410 62 ATCTTTCTCCCTGTTTATTTGTGTTCTTTTTTTTTTTTTTTTTTGATGCACGACTTACAGAG ..:...:..::.x:..x:..x.x..:...................:..:xx..:::...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 40786860 NA +3105 chr4 + 190214555 117325856 117325855 117325905 50 TTTTTCTTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTAGA chr4 - 94230402 72884654 72884653 72884703 21345700 21345699 21345749 50 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGA .:..x::::.........:..........:.........:......x:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 44441202 NA +3186 chr4 + 190214555 117333587 117333586 117333657 71 AAGATTTTTTGGTTTTATATTTACCCTGAGACATTTTCAGTCACAAGTTGTATTATCTTTGGAGTCATATA chr4 - 94230402 14454008 14454007 14454078 79776325 79776324 79776395 71 AAGATAATCTGATTTATTAGCTATTTTTAAACATTTTTAATCACAAGCTGTATTAGCTTTGCTGCTATATA .....xx.:..:...xx..x:..:::.x.:.......:.:.......:.......x.....xx.::..... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 102879579 87334976 +3054 chr4 + 190214555 117333848 117333847 117333913 66 ATACAAATATTTTATACCAATTCTTTATTTCTTTTTTTTCTTTTCTTTTTCTTTTTTTCTTTTTTT chr4 - 94230402 21406198 21406197 21406263 72824140 72824139 72824205 66 ATATGATTATTTTTCTTTAATATTCACTGTATTTTCTTGCTTTTCTTTTTCTTTTTTTCTTCTTTT ...::.x......x:x::...x:.:xx.x.x....:..x......................:.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 95927650 NA +3009 chr4 + 190214555 117366188 117366187 117366249 62 AATTTATGAATAACCATTTTTTGTATTTGTTTTAATCATATGTGTGTGTGTGTGTGTATATA chr4 - 94230402 27034796 27034795 27034857 67195546 67195545 67195607 62 AATTAAAGTATAAACGTCCTGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATA ....x.x.x....x.:.::.xx.x....:..x..xx:......................... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 90331392 NA +3127 chr4 + 190214555 117366236 117366235 117366282 47 TGTGTGTGTATATATATGTGTGTATATATATATATATATATATATAT chr4 - 94230402 43600824 43600823 43600870 50629533 50629532 50629579 47 TGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT ...x.......x..:...........:....x......x:....... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 73765412 NA +3112 chr4 + 190214555 117370001 117370000 117370050 50 TTTTAAAAAGATTTTTTTTTTGTTTTTTTTGTTTGTTTGTTTTTGCTATT chr4 - 94230402 84354815 84354814 84354864 9875539 9875538 9875588 50 TTTTTAAAAGGGTTTTTTGGGGTTTTTTTTGTTTGTTTGTTTTTGTTTTT ....x.....:x......xxx........................:.x.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 33015186 NA +3321 chr4 + 190214555 117374856 117374855 117374975 120 TGTATCTAAAACCCAGTACATTTGACCAGTTTCTAGGAAATAAAGATAAAAAATTAAACTTACAAACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATAT chr4 - 94230402 11922374 11922373 11922473 82307930 82307929 82308029 100 TGTATCCTAAATTCAGCATGTC------GTTTTTAGGAGGCAAATTTGGAATA--------------GGTCTCTTAATAGACATATATGTGTTTATGTTTGTGTATATATATAGAAATAT ......:x...::...:.::.:------....:.....:::...xx.::..x.--------------::.:...xx...x............x.:...x.....:........x.x.... 22M6D25M14D53M 71/100 71.0% 100/94230402 0.0% 20/100 20.0% 105452482 84762073 +3137 chr4 + 190214555 117374866 117374865 117374972 107 ACCCAGTACATTTGACCAGTTTCTA-GGAAATAAAGATAAAAAATTAAACTTACAAACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406367 4406366 4406471 89823932 89823931 89824036 105 ACTCAGAGTATTTTATTTTTTCTCATGGGGATTGAGGTAGAAGCATATA---ACTCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..:...x::....x.::xx..:::.-..::..x:..:..:..:xx..x.---..xx.x...x:x........xx....x....................x:....... 25M1I23M3D56M 71/104 68.3% 105/94230402 0.0% 4/104 3.8% 112968499 77246056 +3148 chr4 + 190214555 117374876 117374875 117374976 101 TTTGACCAGTTTCTAGGAAATAAAGATAAAAAATTAAACTTACAAACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATA chr4 - 94230402 83983216 83983215 83983316 10247087 10247086 10247187 101 TTCAATGAGTGTTTATAACATCTAAATATAAAACAAAAGCGAAAAAATGCTTCCAAAAATATACATATGTGTGCATCTCTGTGTGTATTTGTGTGCATATA ..::.:x...x.:..x:.x..xx.:...x....:x...x:x.x...xx::...:.x.x...:.:.........::.x.x.........x.:.:.::..... 101M 64/101 63.4% 101/94230402 0.0% 0/101 0.0% 33391660 NA +3117 chr4 + 190214555 117374908 117374907 117374999 92 ATTAAACTTACAAACAATTTCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACATAT chr4 - 94230402 4481662 4481661 4481753 89748650 89748649 89748741 92 ATAAAAATGACAGGGACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ..x...x.x...::x.x.x.x.:.:.x.x......x........:....::::x.:...:.:..x:.:...:x:xx.:...........:.. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 112893246 77321309 +3655 chr4 + 190214555 117374927 117374926 117375016 90 TCTATATATACATATATGTGTGTGTGTGTGTGTGTATATATATAT-------------------ATATATAT----ATATATATATATGTACATATATGTTTAAAAGTATACC chr4 - 94230402 48089503 48089502 48089615 46140788 46140787 46140900 113 TCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTGTAAAACTGTACC ...:........::.:.....:....x.x......:.........-------------------.:..x...----...:..x.:x...:...:....x.x.....x.:.... 45M19I8M4I37M 70/90 77.8% 113/94230402 0.0% 23/90 25.6% 69285424 NA +3041 chr4 + 190214555 117374929 117374928 117374993 65 TATATATACATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGT chr4 - 94230402 32959570 32959569 32959634 61270769 61270768 61270833 65 TGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .:..:x..:.:..:x....x.....::...:.......:.......:.x......x:..:xx... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 84415359 NA +3156 chr4 + 190214555 117374937 117374936 117374996 60 CATATATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATGTACA chr4 - 94230402 53500341 53500340 53500400 40730003 40730002 40730062 60 CACATACGTGTGCATGTGTGAGTGCATATATATCTGCATATGTACTTTCAAATGTGTACA ..:...:.....::......x...:........x.::....:..:x.x:.x..:...... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 63874596 NA +7265 chr4 + 190214555 117399995 117399994 117400247 253 AATAATTCTGTGTCACTTTCATATTTCTTGCTGAATATATAACTGACATTTGTGACAAGCCAGTGTTTGTGACAGCTAGAAACATGAATCTCCAATGCTATTG-TTCCCTATTTATGTGATTAATGGTCAAACAGCAGCAGCAAGAGTCA-GAAGACAATTTAACAGTCTACTTTGTCACAAGAGCATTCATTTGTAAGCACTTTCACTTTCTTAAACAAAAATGACAAGCCTTTCTTATCAAAAGA-TTGACAGC chr4 - 94230402 37335008 37335007 37335250 56895153 56895152 56895395 243 AGTATTTCTGT-TTGCTGCCTCACCTCTTGATATGTGCGTTGCTGACACCTGTGACAGGCTGGTATTTGCTAAAATAGGTAGCATGAATCTT---TGTGGTCGCTTCTGTATGTACGTAATGAATGGTCAA------GCAGCATGACTCAAGAGGGCAGTTTAAAAATCCATTTTGTCACACAAGTATTCATTTGAAAGCACTTT--ATTTCTTAAG-GAAACTTCTGTGTCAGTTTTGTCAAAGTAGTTGACAGC .:..x......-.::..x:.x:.::.....x.:x:.:::.x:......::.......:..::..:....:x.x.::x:.x.:.........:---..:x:.:.-...:x...x..:..:..x.........------......x..x...-..:.:..:.....x.:..:.:.........x:..:.........x.........--x........:-:...x.xx::x.:.xx.:..:.....:x.-........ 11M1D80M3D8M1I27M6D13M1I54M2D10M1D29M1I8M 166/240 69.2% 243/94230402 0.0% 16/240 6.7% 80064987 NA +22805 chr4 + 190214555 117422430 117422429 117423171 742 CTAGCTTATGTAGTCATAAAAGTCCAACAGGGGTATTCATAAATTCCTTGTC---------------------ATGGAACAAATGCAGGAGTGGTACTCAAGAGAAGAGGTTTTACAGTCCCGCGATGTCCTTGTTATTCTCCGCATTGATCTCCAGTAGCTGCCTGACTGGAAGTACGTATTACAAAAGGCTGATGAAACTGTGAAAGCCTCAGAGAAGTAAGGCACTCAGTACTTCCTATGGCATAATGAAGATATATGCAGTTACATGAAAATTAAGATGGTCCCAGATCAATAATGTAAACCAAATAATAAAAAAGACAAACTTCTGT-TTCTCTAAGAAAGAAACTTACAGTGAAACTGTAGATCACAACTAATTTGTGAGGTTGTAATGTACAAAGTATGCTTAAGATTTCA-AGGTTCTTGTATTGCTTATCTGAATGAAATTAAACACATATATCATTCTAACAAATATCTCCCAGCAGATTATGAACTTTGAAAATGGGGAAAGGAATTAAAGGCAATGTATTTTATATGTGTGTTCCTTCTTCTCAG--GTTCAGTTATTTCCCCACAAAAAATTTATGTTTTCTATTCAACAGACATTGACCAGTCTTTTAATAGATGCTGCTTGCTAAAATAGTGCAAAAACTTACTCTCAAAAACAATAAACGCAACAGCTCTCATTTATCTAATCATCTAAGTGACAAATCTAGTAGCCCATTTCAAAATAGTAGAAAGGGGTGTAGAGATATGACTTGATTC chr4 - 94230402 37345510 37345509 37346247 56884156 56884155 56884893 738 CCAGATTACTTAATTATAAATGTATGTCAGTGTTACTAATAAATTTCTTGTCGCACATCCTATTCAGCAGCTCAAGAGATAAAAACAACACAGGGACTTGAGGAGTGAAGTTTTACAGCAGTTATAGAACCTT---ATTTCCTACAGTGCTCTCTGATTGTTTCCTGTCTGAATGCATTCATTATAGGGGGCTGCCCA------GAAGAC---AGAGAA-CAAGATATTCTATTCTTCCTATTGACTATCGAAGATATATGCAGCTATGTGTGAATTAAGATGAAAGAAGTAAAATAATG------AACTGTTGTGGAATAGAAAATGCTGTATTATTGGAAAAATAGA---GGGGTCATACTGTGAATCACAGCTTATGTGTG--GTAATAATAGCTATAGTATGCTTAAAATTTTGGAACCTATTGTATTTCCCATTTGGATGTAATTAAATACATACATCATTCTAATAAACCTCTCAAAGAAGATTGTGAACTTTGGAAGTGGGGAAAGGAATTAATGGCAATGTATTTCATATTGGTGCTCCTGCTGTCTAGCAATTCAATTATTTTCCCATAAAGAATTTACACTTTCTACACAACAGATGTTGGTCAGCTTTTGAATAGACATTGCT---GAAGGTGGAGTGAAAAATGATCTTCAAATACAATGAACTCAACAGCTATTACTTATCTTCTGATCTAAGAGACAGGCCTAATATCCTGTTTTGAAATA--AGAGGGGGAAAAAGAGCTTGGACACAGTTC .:..x...:x..:.:.....x..x::x...x.x..:.x.......:......---------------------.x.::.:...x:..:x.xx..x...::..:::x..:.........:xx:xxx.x:x....---...::.::..x..x....:::.x.:.x....x...:.x.:.:x:....:.:::.....x:x.------...::.---......-:...::.:..x:.x........x.xx..x:..............:..::..x:..........:xxxx..xxx.......------..x.:x.:x::..x.x...x.x....-..x.:x:.:...x.:.---:x:..x.x.....::......:..x..x....--..x:....:xx:.x...........:....::-.:x:.x.......x.::..:..:...x.......:.....:..........:...:x....xx..x.....:.........:..:................x............:....xx...:....x..x:::..--:....:......:....:...:......:::......:x.......::...::...::...x......:::....---x..::.:.x.::....x.x.:::.....x.....:...x........x.:.:......xx.x.......x....:::...:..x..::...::.....--...::...:x:x....x.xx...x:::... 52M21I60M3D62M6D6M3D6M1D80M6D26M1I16M3D32M2D32M1I138M2I75M3D98M2D30M 483/713 67.7% 738/94230402 0.0% 54/713 7.6% 80076920 NA +3231 chr4 + 190214555 117442566 117442565 117442617 52 ATAGTATTCCATAGTGTGTGTGTATACATATATATATACACACATACACCCA chr4 - 94230402 34061851 34061850 34061902 60168501 60168500 60168552 52 ACAGTAATACAAAGTGTGTGTATATACATACATACATACACACACGTACTCA .:....x.x..x.........:........:...:.........:::..:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 83380715 NA +3166 chr4 + 190214555 117453440 117453439 117453483 44 TATATATGTGTGTGTGTGTGTATGTATATACATGTATAGATAGA chr4 - 94230402 50558511 50558510 50558554 43671849 43671848 43671892 44 TGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGA .::..:...x..........:....:..............:... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 66894929 NA +6671 chr4 + 190214555 117454121 117454120 117454298 178 AACTGCCAGAAGAAATACCAACAATGACTGCTCCC----AAATGACACCCATGAACTGGTGCCTTCAGTAGAAAGGGATCTATGAGAAAGGTATATTAAGGGCATTAATATTATGTTTCTTGTCAGAGGTAAATACTGCATAGTGTTCTTTGCTCTTGTCAATATCATGCAA--TTTTGTTCCT chr4 - 94230402 37351110 37351109 37351287 56879116 56879115 56879293 178 AACAGCCAGGAGAGTTGACAAC------TGCTGCCTTGTCAGCAACACACATTGATTAATGTCCCCTGTAGAAAGAAATTTGTGAGGAGAGTGGCACAGGGACATTAAAGTCATTCTTCTTGTCAGAAATAAATGCTGCATGGTATTCTCTGCCCTTCTCAGTGTTATGCAGGCTCTTGTTCTT ...x.....:...:x.:x....------....x..----x.:::....x...x:.:.::..:.::.x........::..:.:....:.::..:xxx:.:..:......x:.:..x:...........::.....:......:..:....:...:...x...:.:.:.....:--.:......:. 22M6D7M4I133M2I10M 118/172 68.6% 178/94230402 0.0% 12/172 7.0% 80103011 NA +3849 chr4 + 190214555 117490442 117490441 117490502 61 CTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTTGCGAGCAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.............x...x.xx.x.........x.:..:......:......x...... 61M 50/61 82.0% 61/94230402 0.0% 0/61 0.0% 99293303 90921252 +12088 chr4 + 190214555 117491451 117491450 117491927 477 AGAGATCTTGTGTGGAATGACAA----TACTTTTAAAAGATTCTGCTTTTAACACGTGTTTCTTTTCTGCTAAAAGACATTCTGCAGAATAAAGCTCAGAACGCAAGGAAATCAATTCCCAAATGGGTC-TGTATTCCCTCAAGGCCA-CTTCTCTGCTCTTTTGTCATTAATTGTATTGACAGCTGGTAGTTGCTACTTTGAGACAATTTATCTTCTCACTGCATATTTATTGAAATATATCTTGTTGTATTATTGACCTTACACC-ATGAGGAAGCAGTGAATAATGGCAAAATCCCCTGGGTCCTGACAGATGG--TTTTAGTATTCAA--CTTTGCTGTCAGCATTAGGCCTCACAGCATATGCAAAACAAAAGAACATTAGCCTTTGAAGGGAAAATGAAATGTTACCTGAATTAAAGGAGCAATGTGGCAATTCACGTACAATATTTGTGTTTAATCCTGAATTTCGAAGGTAAAGTATCTT chr4 - 94230402 37372386 37372385 37372839 56857564 56857563 56858017 454 AGAAATGTAGTAAAGAGTGGCAAATGGTACTTCTCAATAAATAGGCTCTT-------------TTTGTGCATAAAAAGGTCCAAATGAGTAACCCCTG-------AGGAAATCAATTCCCGAATGGCTCATATAATCCTCAGAGGCCAACTCCAGTGCTCTTTTAGCTCTAATTGTATTGACAGCTGGTAGTTCCAACTTTATAGCAATTTATCTTCCTAATGAATATTTATCGAGAGTTTTCTTGTCACAGTATTGACCATACATTAACAAAGAGGCTGTGGATAATAGCAATAGCCCTGCAGTCCTGACAGATGTTCTCTTGGTGTGGGAGCTTTTGCCAACAGCAATTGGCCTTGAGGCACATGCACAACAAAATAAAACAATACTTTGTA-TAAAAATACAGCATTAAGTAAGTGGATGAAGC----TAGCAAATC---------GTCTATATTCAGTTCCTGATTTTTAAACCAGATTGTCCT ...:..x.x..:x:..:..:...----.....:.x..x:.x.xx...:..-------------...x...xx...:.x:.:.x:xx..:...xx.:::-------...............:.....x..-.:..x...::x:......-..:.xx.........:x.x:........................x.x.....:x::............::.x..x........:..:.xx.x......:::.x........x....::-.::.:..:..x...:.....:....x.x...:xx:.............x--.:..:..:.xx:.--:.....::x.....x.x.....::x:...:.....x.......x..x.:x.xx.....x.-x:.....:x.:::...xx.:.:.x:.x.:...----.:....x..---------:.:.:.:..:.:.:.:x:....:x..:x:.:.x.:..:. 23M4I23M13D35M7D24M1I18M1I118M1I49M2I13M2I60M1D32M4D9M9D39M 298/443 67.3% 454/94230402 0.0% 45/443 10.2% 80119065 NA +3210 chr4 + 190214555 117501205 117501204 117501337 133 TGACATAAATTTACAAACTTGAAAGATGAACTGACATACTGAATGGATTGTAATTTTAAAAAAGTGATTTGGAATATCAGAAAAAAGCATTGTTAACATTCTTATCAGTACCGGTATATTATTCAAAATCATA chr4 - 94230402 21839539 21839538 21839671 72390732 72390731 72390864 133 TGACAGAAGTCTGTGAAATCAAAACAGGATATGTCACATCAAATACATTTTATTTTTATAAAAGTAACGTAAGATGTTGAAAAGTACCAGATTAATCTATATTATGCATATTCATGTATTATTCAAATGCATA .....x..:.:.:::..x.::...x.x..xx..x..:.:::...:x...x..x.....x......:.:x.:::..:.:::...:x.x..xxx.x.x.xx.x....xx:..::x:.:...........xx.... 133M 79/133 59.4% 133/94230402 0.0% 0/133 0.0% 95661666 NA +3009 chr4 + 190214555 117508491 117508490 117508531 41 AACCATCATTATTTCTCATTTATTTGCTTTTTTATTTTCTG chr4 - 94230402 1205266 1205265 1205306 93025097 93025096 93025137 41 AGCCATTATTATTTCTCATTTATTTGATTTTCTATTTACTG .:....:...................x....:.....x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 116303225 73911330 +11853 chr4 + 190214555 117550063 117550062 117550655 593 TTTTATGCCTTT-------CTCTGAATGGGATTTCTGATTTATTGTTACATCTACAAGAAAACTACCTAAAATAACCTTAAATAATTAAAAGTATAAAATTCAATCTCACAAAGACAAATAGGTTGTCTCACATCTTCCCCCAAGTCACACAGCATTGAGCCATTTGTGATACGAAGTTCTGCCTAACAGTGATCCCTTAGCCTAAACTATCACT---------ACAAGGCAGCTGGCAATTTGACAGGGA--GAGACAAGCTGATAGCTTTTCCTCAAACATCAAGCATGCACTGTGTTTGCAGTGCCAAGCTGGATTTGACATTTAATTAAAAAAAGTATCTT-------------------------AACATAGGTCTACACAAA--AATCGAG---------------GCTGTTGCA---ACAAAATCAATTTTGTCTTATTTAAAGCTGGAAAAGCTTGATGCCCCAAAGGCAGAATTTTT--------ATAAGAAAAGTATCACTGCTCTACCAGCGGGAATACTGAGGGTATTAAAAATAATGTATTTTGACTAGTTTATGGCATTGGACTTGGCTCAGGACTGCATATAATAACTGTTTATTAAACAAGTTGAGCTGCTATAAATAAAAGAATCC-GTTGCTATAATTAGCTTGTGA chr4 - 94230402 37391530 37391529 37392158 56838245 56838244 56838873 629 TTTTGTGCCTTTGCCCTAATGCTAAATAGTATTTTGCATTTCTTTTAATG---GTATGGAAAATTCTTAAGATATCCTTAATTGCTTTGGG-----------AATCTTGCT--------TTGGGAGTATT---TCTTGCCCCATATTGAATACTATTGAGCTATATGCAGAAGAGTATGTGGCCAAATGGTGACCCCATAGCCCAAGCTAAATCTCAAAAAAAAAAAAAAAAAAAGGGAATTTAATAGGGAAAGAGACAATATGACAGTTTTTCCTCAAGTGTGAGTCATACAGTGTGCTCCCAATGCCAAGCTGGGTTTGAGATTTGGTT-TAAAAAGTATCTGACAGAGAAGGaaaaaaaaaaaaaaaaaaaaaaGGCAACCCAAAACAAACAAGTGCATGAATACACACACTGATACAGCTGCAAAACCAAATTTGTCTTATCTAAACCTG--CAACCTTGGTGCCCAGAAGGCATAAATCTTTGACAGAAAGAAAAAAAAAATTAATGATGTACCATGGGGAATATAGACAGCATTAAA---AATGTATCTTGACTGTTCTTTGCTGAGGAACTTGGCTTGAGG----GTATAGTGA-TGCTTAATAAGCAAAAGGAATTGCTATAAATACTCAACTCCTTTTACTATTATTAGACTGTAA ....:.......-------:x..:...:.x....:xx....x..x.x.::---::.x.:...x.x.:...:...x......x.:x..x:::-----------.....::.x--------.x..xx..x.:---....x.....x:.::x.:.x:.......:..x..:::x.x::x:.x:x...x..::....:...x.....:..:...xxx..---------.x..::x.:xx..x.....:.:.....--.......xx...:..:..........:::.x.:x...:..x....:.:x..:...........:.....x....::..-x...........x-------------------------..x.x.:.x.x..x....--..x.:..---------------:...x.:..---:.....:...x..........:....x...--x..x....:.....x:......x..x.:..--------.x..:....:x..:.x..x.x.....xx.......:x..x:.:......---.......:......:x.:.x..x::xx.:........:::.:----:....:.:.-..:...x...:...:xx..::...........xxx:.x...-x..:....x.....x:...:. 12M7I31M3D38M11D9M8D11M3D82M9I27M2I78M1D13M25I18M2I7M15I9M3I30M2D30M8I49M3D42M4D9M1D41M1I21M 378/557 67.9% 629/94230402 0.0% 108/557 19.4% 80158533 NA +3700 chr4 + 190214555 117566482 117566481 117566560 79 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGACTCAGCCTCCCGAGTAGCTGGAACTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:.::........:.x...x.xx.:........::.:................x...--...... 71M2D6M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 99369356 90845199 +3088 chr4 + 190214555 117614221 117614220 117614306 86 AGACATATACTTGTGTATATATACCTATACACACATATATGTATATGTATGTGTGTGTGTATATATATATATATATATATGTATAG chr4 - 94230402 81401291 81401290 81401376 12829027 12829026 12829112 86 AGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAG ...:..x.x:x...x.:.:.x..xxx...:.:.....x:x...:.....x.............x..:.x:....:x..:.::.x.. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 36212930 NA +3580 chr4 + 190214555 117702013 117702012 117702135 123 CACAGTAAATGTACATGTATATGTGTGTGTGTGTATATATATATACACA----------TATATATATACACATATATTTATATATATATATATACATATATACACACACACACACACACACAGACAGACAGA chr4 - 94230402 73121083 73121082 73121215 21109188 21109187 21109320 133 CACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAA .....x..x....xx:x::.:..::..::.:.x:...:.:.........----------..:...::..:.x:..:.:xx:.....:.:x:..:.:...x....:.x....x.x.......::x.:.::..:. 49M10I74M 76/123 61.8% 133/94230402 0.0% 10/123 8.1% 44580930 NA +3051 chr4 + 190214555 117702022 117702021 117702070 49 TGTACATGTATATGTGTGTGTGTGTATATATATATACACATATATATAT chr4 - 94230402 56650835 56650834 56650883 37579520 37579519 37579568 49 TGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ..:...xx......:.....::.x......:...:.....:........ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 61051187 NA +3023 chr4 + 190214555 117702033 117702032 117702119 87 ATGTGTGTGTGTGTATATATATATACACATATATATATACACATATATTTATATATATATATATACATATATACACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACA------------------CACACACACACACA ........:.....::...x.:..::.:x..:....:..::.x..:...x...:.------------------.............. 55M18D14M 52/69 75.4% 69/94230402 0.0% 18/69 26.1% 109306245 80908310 +3983 chr4 + 190214555 117702053 117702052 117702137 85 ATATACACATATATATATACACATATATTTATATATATATATATACATATATACACACACACACACAC--ACACAGACAGACAGAGA chr4 - 94230402 8395788 8395787 8395874 85834529 85834528 85834615 87 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ..:.::::..:.:.::...x....:......:....:...::x.....xx..................--.....:.:::.:.:.:. 68M2I17M 60/85 70.6% 87/94230402 0.0% 2/85 2.4% 109306265 80908290 +3193 chr4 + 190214555 117702060 117702059 117702147 88 CATATATATATACACATATATTTATATATATATATATACATATATACACACACACACACACACACAGACAGACAGAGAGAGAGAGAGA chr4 - 94230402 8395787 8395786 8395874 85834529 85834528 85834616 88 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ...:.:.:...::::::...xx:..:...x..:....::..::x....:xx.:.............x.......x.:.x::.x.:.:. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 109306273 80908282 +3697 chr4 + 190214555 117702062 117702061 117702129 68 TATATATATACACATATATTTATATATATATATATACATATATACACACACACACACACACACAGACA chr4 - 94230402 8395793 8395792 8395860 85834543 85834542 85834610 68 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .:...:.:.:..:.x.:..x...x..:....:...:.x..:..xx.:..................... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 109306269 80908286 +3029 chr4 + 190214555 117702105 117702104 117702157 53 ACACACACACACACACACACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652085 67652084 67652137 26578266 26578265 26578318 53 ACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ....::...x...:...:..x:.x.:.x.:.:...................:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 50050020 NA +3026 chr4 + 190214555 117702106 117702105 117702159 54 CACACACACACACACACACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xxx.:.x.:.:.:..................... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 50050022 NA +3009 chr4 + 190214555 117708313 117708312 117708361 49 AAGACAAACAAACAGAAAACAACATCAACAAAAAAAGATCCCACAAAAA chr4 - 94230402 79230835 79230834 79230883 14999520 14999519 14999568 49 AAAACAAACAAACAAACAATAACAACAACAACAAAAAAACCCACATAAA ..:...........:.x..:....x......x....:.x......x... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 38477478 NA +34944 chr4 + 190214555 117747107 117747106 117747775 669 ATAATAGAATAAATGTATC----TCTAAGTTACAAATGTGCATAATTTCAGTTATTTTATGATAACCCTTCACTGGCTTTCTAGATATTCTTACCACTGCATTTTGGTGCAT-TGTATTAATAATGTCTTGATGTATCTTGTGGCTTAATTCAGTGTT-GTTAA-AGGTGACCTTTTGATTTGATTGTTTAGCTGACTTTGGTGCTAATAAGATAAAGAATGAGGTGTCTAATGAACCTTGTATATGGAAATAATGATAGATGGCTTATTTGGAATTCTACAGACGCAGCACTGCCAAGGCTGCTGAGGAGTCTTTGGATCCTAACTAATTTTAGAG----AGGTTTTATTGATTACACAGAGACAGGGCACATTTTAATCATTTTTACAGCACTGTATTGCCTGAGGTACCAAAATCCATTAAACAAGGATTATAAACTTTATTTTAAACTGGATCCTAAATTGTTTCTTGATGTATAGTCAACAACGGCTCTGTAATATCAATCACAGTTACTAAGGCATATTAAAATCAACTTGTTTAATTTTAATTGCTCATATGCCTGACCCTCTGAGAAGCAGCTGTTCATGAAGCTAAATTACTTTTCTCCCAGATAGGAGTTTCATTTTAGTTTATGTTGCGATCATTTCTTTCCTAAGGCTACCAACATGTTCTGTTTTTT chr4 - 94230402 37456079 37456078 37456748 56773655 56773654 56774324 670 ATACAAGAATGAATTCACCCAATTTTCATTTGTAAACGCTTTGCATTTCATGTCTTGAATG-----TCTCTGTCAGTCTTTTATCCATCTCTGCTACTGTATTTTGACATATATCTGTTAAGA---TTTTGATGTATGTTTTGATCTAACTGCATGTTTGTTAATAGGTGACCTTTTGCTTTAATTGTATGGCTGACTTCAGTGCTAATAAGCTGAAGGATGAGATGTCTAATGAGTCTTGTGTATAGAAATAATGATAGATGACTTATTTGGAATTCTACAGACACAGCATGGCCAAGCATGCTGAGGAGCCCTTGGAAATGAGCCAATCTTAGAGTGGGAAGCTTTATTGATTACACAGAGATAGGGCACGTTTTAATCATTTTTACAACACTGTACTGCCTTAGGTACTAAAATCCATTAAATAAGGAGTAAAAGCTCTGTTTTAAACTGGATCCCAAATTGTTTCTTGATGTACAGTCAACAGCAGCTCTGTAAGATCAATCACAGTTACCAAGGCGTATTTAAATCAACTTGTTTAATTTTAATTGGTCATATTCCTAACCCTCTGTG-AGTAGCTGTTCATAAGGCTAAATTGCTTTCCTCTCAGACAGGGGTTTCATTTCACTTTGTGGTA-GTTCTCTTTCCTTTTACACTAACCAGCATTTTGCCTTCCTT ...xx.....:...x:.:.----.:.x.x..::...:.:x:xxx......xx.x..xx...-----:..::::::.::..:..xx:..:::.:.:....:......::::..-.x.:....x.---.:.........x..x..:::...:.xx:....-.....-.............x...:.....x.:........::...........x.:...:.....:..........::.....:...:................:.....................:.....:x......xx..........:.:.....xx:x.:.:...:......----.:.:...................:.......:.................:.......:.....x......:.............:.....x..x..:..:.:...............:..................:........:.:.........x...............:.....:....x.........................x......x...:........x.-..:..........:.:........:....:...:....:...:.........:.x...:..x.:-.x..x:..:::.::..x:x:x....:...x..x:x..::.. 19M4I38M5D46M1I10M3D32M1I5M1I172M4I232M1D64M1D41M 512/659 77.7% 670/94230402 0.0% 21/659 3.2% 80291028 NA +16546 chr4 + 190214555 117779440 117779439 117779782 343 ACTTGTTTGTGGAAGAAACAGTCTCCTGAC-----AGTCTTCTTTCACAGTCATTGCTTGTGGGCTTTATTATTAATAGAGTCACTTTGGTGACTGTCATTATGTCTTTCCAAGC-TTTGACTCTGCCAGCAAGTATCGATCTGCAA-ATGAGCTACCCAAGGACAATGGCATCATTAATTGCTAAGTGATCTGAAAAACAATTTGAGACCTCCAGGCTCATGTACAAATGGATAGTCAGAGCTGTCAGCCTAATCAGATACGGTTGTGCTTGCCTGTGGA-CCAGTTGGACTCCTCAGAAAAGTCCTCCACATCTGTCAGTTTCCCACTTCTCACAATAAAGCACATGTC chr4 - 94230402 37465040 37465039 37465381 56765022 56765021 56765363 342 ACTTTTTGGTGATAGAGATAAATTCTTGTCCAAGAAGTCTCACACCCCAACCTTTGCTTGTGGGCTGTATTA---ATAGAGTATCTTC----ACTGTCATTATGTCTTCTCAGTCCTTTGACTTTGCCAGAAAATATTGATCTGTAGCATGATCTGTCCAAGGGCAACAGCATCATTAATTGCTAAGTGATCTGCAAAACAATTAGAGACCTCCTGGCTGTTGTACAAATAGATGAATGGAGCTGTCTACCTAATCAGATACGGTTGTATCTATCTATGGACCCAATTGTGTTGTTCACAAATGTCTTCAACATCTGTCACTTTCCCACTTCTCTCAATAA--CATATGCC ....x..x...:x...:.:.:x:..:..x.-----.....:x:x:.x..::.x.............x.....---.......xx...:----................::..:x.-.......:......x..:...:......:.:-....x..::......:...::.........................x.........x.........x....xx.........:...::x::........x:...................:::.::..:....-...:...x::.x:...x...x...:..x..........x.............x......--..:...:. 30M5I37M3D13M4D23M1I31M1I133M1I59M2D8M 261/334 78.1% 342/94230402 0.0% 17/334 5.1% 80314400 NA +3102 chr4 + 190214555 117805172 117805171 117805211 40 GCTATGAAAAAAAAAAAAAAAAAAAAAAAAAAGGCATTCC chr4 - 94230402 82688960 82688959 82688999 11541404 11541403 11541443 40 GCCATGGAAGAAAAAAAAAAAAGAAAAGAAAAGGCATTCC ..:...:..:............:....:............ 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 35116212 NA +3079 chr4 + 190214555 117805177 117805176 117805234 58 GAAAAAAAAAAAAAAAAAAAAAAAAAAGGCATTCCAAAAGGCAAAAAAATACAATTTT chr4 - 94230402 60575134 60575133 60575191 33655212 33655211 33655269 58 GAGAAAAAAAAACCAAAAAAAAAAAAAAGCATTTTTAAAACCAACAAAAAGTAATCTT ..:.........xx.............:.....::x...:x...x....x::...:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 57230043 NA +3898 chr4 + 190214555 117812342 117812341 117812497 156 GGGCTGTATCGTATGGTGGTTAAGGATATGGACTCTGGAGTCAGACAGCAGGGTTCCAAATCTGTCCTCTATAATTTACTGTCTATGTGACCTTAGGTAATTCACTTAAACATTCTGTGCTTCAATTTCTTCATACATAAAACTGGGATAGTAATA chr4 - 94230402 11947155 11947154 11947285 82283118 82283117 82283248 131 GGGGTGTATTATATAGCAGTTAGAG---------CAGGAG----ACTGGGGACTTCTGAAT-TGTCCTC--------ACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAAT---GATTATAATA ...x.....::...:.::....::.---------.x....----..x.x:.:x...::...-.......--------...:x..:.............x.x........x.xx:.....:::..:....::...::..:...:---...x:..... 25M9D6M4D17M1D7M8D66M3D10M 94/131 71.8% 131/94230402 0.0% 25/131 19.1% 105865187 84349368 +8994 chr4 + 190214555 117821960 117821959 117822402 443 CAATCCATTAAAGAACAAAGCTATGTAAAACATTGCTAATAAGTTACTTGATGTCTGCAATCAACTGCTTCCTTGCCTCTAACTCATTTTGTATGTAGATTGTATCCACTTTCTGTTGATGAATTAGCAGCTTTTACAAGTGAATGGGCAGAAAAGAGAAGCTAAATTGGCTAATAGACACACACACAGTTAGAAAAGTCAATGTATTTTGTGCAGTGAAGAGATTTCTTTACAATTCAAGCTAACGAACTAAATTATACATATTAACGTAATGTAATATTTGTTACTGGATTG---TTATCCA--TTTAAATATGCA-AAACCTACACTTTCTCAATGCTCTGTTTCTAAAAAACTCTGCCCTATTGGCTTGATTCAATTAAGCAGTG-GCCATCAGCGGCAACTTTAATAAACACTTTTGGTTTCTTTATTGCATAGTGACATGTATT chr4 - 94230402 37484782 37484781 37485201 56745202 56745201 56745621 420 CAACTCATTTTAAAACCAGGGAATG---------ACTAATAAGTTCCTTGATGTATGAAATCAGGTCTGTAGTGG--TCTAGCTTACAGAGTGTTGAGGCTGCACAGACCTTCTGTTGATAAATTAGCAGATTTTCCAAGAATGAGGGCAGACAGGAGATGC-AAGT--GCTAATAGAC-----------TACAAAAAGCACTGTACT-----CAGCAATGAGATTTTTTTGTCATTCCAGAAAGGAAACCGTATTAGTCATGCTAATGTAATATACTATTTGTGATTGCATTGACACTGTCCATTTTTAAACGTTCAGGAAGCTACATCTTCCATACATTCATGTGCAAGTACATTATGCTGGGTTAGTGCTAGTCAATGAAGCAGTGTGTTGTCAACTTTAGTTAAAACAAATGGCATAGGCTACTGCATCACTGAGCAACCTGCATT ...::....xx.:...x.:.xx...---------:..........x........x..x.....:x.x:x.xx.x.--....:..:.:xxx..:.xx..::..:.:xx..:..........:.........x....x....x:x:x.......x.:....x..-..:.--..........-----------..x....:x..x....:.-----...::.x.......:...::x....x..xx.:x:...::x....xx...::...:.....:..x.......x.:..x....---:.:....--......::.x..-:..x.....::...:xx.:::..xxx.x.x.:x.x.:.x...:xx:..:.:x:x.x.....x........-.:::...:.xx:.::.xx..:...::x:x.x..:.x..x:..::.xx..::..x..:... 25M9D41M2D85M1D4M2D10M11D18M5D81M3I7M2I12M1I70M1I60M 267/413 64.6% 420/94230402 0.0% 37/413 9.0% 80337178 NA +11494 chr4 + 190214555 117822911 117822910 117823347 437 TGGACATTAGGAGTTGCCATTCTACCTGCACAGGAAGAGCCTGCCTTATTGAGTTGCAGTCACCAGTCTTTCTGGCAA-CATAAAATCAGTAACCTCATGGGTCAGTTAGAACCAACTCAACATTGTACTTCCTATGGAAAAGAGGATGAGCCAAAATATGTGACAGCTCTATGTCAGCTTTTCACATTGTTAAAATACATGATTCCTCTCCTTTCACAC-----TCTGAAAGAAATGAGAGAGATGTGGAGTTGTCAGATATTTGGGACTTAGCCATTCATTAAACAAGAAGTGTTGTATTAAATCAGTGATTTTGCCTGCCTGAAATGACCTAGAGTCTAAACAACCTCCCAGTAATGTAACAGCTATCACTTTTCTATATCTATTTAACATGAAAGTCTAATAATTATCATTATAACTATTATCTGCA--CTCAGGACTTTC chr4 - 94230402 37485340 37485339 37485774 56744629 56744628 56745063 435 TGCATGCTAGGAACTGCCATTTTCCTTTCCAGCACCAAGTCTGCAGTGCTAAT-----GTCAGTTGTTTGTCAGGCAAACACAAGATCAATAAACTCACAGGGAACTGAGAGCTCACCTGAAGTTGCACGTTCTGGGGAAGATTAGCCAAAATGAAATGTCTGGCAGTTCTGTGTCAGCTTTCCACATTG-CAAAATGAATCATTATTCCTTCTTCTTATGAGTATCTGAAGGGAATGAAAGATATGTTAAATTGACAGTCAGTTAGATCTTGGCCATTTGTTAAGCAGGAAGAATTAGATGAAGTCGGTAACTTTGTTGCCCTGGAATTACCTACAGTATTAGCAATTATTTAGGAACATGTCAGCCATTCCTGTCACA-AACTGTTTAGCTTGAAGATC-ATCAA--ATCATCAGACCTATCATCTCTAACCTCAAGCCTTCC ..x.:::.....::.......:.x.:.x.xx:x:xx:..:....xx.::.:.x-----....x:x..:.x..x.....-..:..:....:...x....::..xx.x.x...:.:x..:::.x:...:..x.:..:x....:.xx:.x::.:x::....:.x..:...:...:..........:.......-:.....:x..x...x:..::::...x:.:-----......:.:.....:...x....x:.:...x...x:.x..:.:x...:......::....:..:....x:..:x..x..:..:..:.:....::xx....:...x.....x...x.x.:...::x:::..x..::.:x....:..:x..x.:x:.-.x..:....:.x....::..-.x:..--.....:.x.x....:....x:.--....:.x...:. 53M5D20M1I111M1D29M5I155M1D20M1D5M2D22M2I12M 270/427 63.2% 435/94230402 0.0% 18/427 4.2% 80337571 NA +18759 chr4 + 190214555 117873049 117873048 117873643 595 GAGATACCTGAATGCCAGAAGAATAGATAAGAACTTTACCTTTAAAAAAAAGAGAGAGAGAATGATTACCTCCACTTGTTGGATTCAAAAGAAAAATTTAAATATATTTCTC-----------ATCTTCACGCTGTATTATTCCACCTGATAATAGTAAAGTAGCATAAATCCTAAATATAAAACAATT-----TACTTACGCTTCTCAGCACACAGATCACATAATTCTGTGCTTGTACACCAGTGTAAAAATGTGTTCTGGGAAGATCAAATTTCCCAGCTAGTTGTC-TAAAGGACATTAACCCTCCATTATTTATTAGGCCGATTATAAAAGAAAGTTCTGCATGGTCCCAAAAGAGAAAAAAAAAATTGTCATGGTTCCCAGGAAGAAAAAATAAAAAGCAAGGATTATCCTTGAAAG----CAAAGAAGAGAATAGATTTTTTGTCTTTTTTTTTTTTTTTTAAACCCAGTTGTCAGAAGAGTTGCCATGGGCACCA-TTAGGGGCCTAGGTTTAAATGTCAGATTTCTCTTCAACTACTATCCTTTTAACATTCTTTTTTGTTGTTCTTGTCCTGATTTCTCCTCCAGAGTTTTTTTAAACAATTCAACT chr4 - 94230402 37500765 37500764 37501317 56729086 56729085 56729638 553 GAGATTCTTGAACGACAGAG---CAGATGGAAACCTTA---TTTAAATTTAGAAACCGTGAATA-------CCACATGCTGTGCTCATTGGAGCAATTCAAGTTGGTTTCCCTTAAATGATTTATTTTAATGCTGGATT---TCATTTAGGATTTTTAAAATAGCATAAACACTTGATGTAAAACATTTGAAGATATCTATATTTCTCA---------CCATATAATGCCTCGCTTGTATGTAAGTGTGAAAATGTATCCTAAACAGGTCAGATTTCACAGCTAGCTGTCCTGAAGGACATTAACACTCCATTATTTATTAGAGCCATTATAAAAGAAACTCCTGCACCGTCCCTAAAGAG---AGAAAATCTGTTATGGTTCCCAAGAAA-------GAGAAGTAAGGATTATCCTTGAAAGCAATCAAAGGAGAGAATAGTTTTT-----------------------ATCAACTTGTCAGTGGAGTTGCCATGGGCACCAGCCAGGAGCCTGGACTTAAATGTCACATTTCCCTTCCACTACTGT-CTTCCCATTTGCTTTTGTTTTATTTTTGTATTCATTCCATTAC-----TTTCTTTTTATAATTTATCT .....x.:....:.x....:---:....:::...:...---..x...xxx...:.xx.x....:-------....x..:..x::...xx:..:x....:..:.xx:....:.-----------..:..x.:....x...---:..::.::x.x.xx....:.........:x..x:..:.......x..-----..::..:::......---------:..:.....x.:x:.......:::x.....:.......:.:..:::x..:...:.....x.......:....-.:............x................:x.x.............x.:.....:x.....x......---.:....x:...:..........:...:-------:.:...:..................----.....:.........x....-----------------------.:.x.x.......x:..................-::...:....:.::..........x.....:....x......:.-...::x.:x.x.....x.x..:..:....x:.x...:.x::x.-----...:...xx.:....:.x.. 20M3D15M3D23M7D41M11I16M3D47M5I15M9D72M1I70M3D27M7D25M4I20M23D33M1I44M1D43M5D20M 390/531 73.4% 553/94230402 0.0% 86/531 16.2% 80372284 NA +3377 chr4 + 190214555 117873455 117873454 117873527 73 CAAAGAAGAGAATAGATTTTTTGTCTTTTTTTTTTTTTTTTAAACCCAGTTGTCAGAAGAGTTGCCATGGGCA chr4 - 94230402 20954438 20954437 20954510 73275893 73275892 73275965 73 CAAATAGAAAAACAAATGTTATGTCTTTTTTTTTGTTTTTTTAATTTTGTTCACAGAAAAGTTGTTATGTGTA ....x.::.:..:.:..x..x.............x......x..:::x...xx.....:.....::...x.:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 96919017 93295538 +3016 chr4 + 190214555 117940993 117940992 117941045 53 TTTTTGTTGTTGTCGTTGTTGCTTTCTGCTTGTTTGTTTTTCTTTCAATAGTC chr4 - 94230402 66916766 66916765 66916818 27313585 27313584 27313637 53 TTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTCATAATAATC .....x.......:.......:......:..x..xx....:..:x:....:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 51024227 NA +15138 chr4 + 190214555 117965600 117965599 117966002 403 ACCTAAAATATAAAGGTAAGGGATTTGGAAACAAGACATGCCACGTGAGCATTTTTTCTATGTAATGCCAGAGTCAAATCTACAGAGAAGAAAGGAGGCTTATAATGACACATAA-GTAGTTGTGAGAAAAGACATCACCAGCAGTTTCCTGACAGAAAGACTGAGATTTAATCACCCGAAGCTGCTTTTGCAGCCACTGCTGAGGCATGTTAGCTTCACTGTCAGGGAGCAGGATGCCTGTCAAGACCGCAGTAAAGCAAACGGAATCGCTGCCAACGTGCTGCCTACAGACAGCAGATGAGCCTCATACGCCATTTATTTTACTTCTGCACATTTTGATCTTGTGTTATGTTATCTATAGAAAACACCAAGCC-TGTATATCACTACAAAGGAACATCAAGAG chr4 - 94230402 37508407 37508406 37508793 56721610 56721609 56721996 387 ATCTGCAACATATTGATAGGAAACCTT-AACCAACAGATGCTCTGTGGGAATTTC---------ATACTGAGGTCCAATCAATATAGGAGA---GAAACTTCTAATAAGACATAATGTAGTTGTGAGACAAGACATCACAGGTGATTTCCTGAAAGAAAGAGTGAGATTTAAGCACTTTTGGCTACTTCTGCAGCTAGTGCTGAGGCACGTTATCTTTTCTGTCAGAGAAGGAGATGATTTTCAAGACTGTAATCAAGCTA----AATTGCTGCCAACCATTTGCTCACAGACAACTGATGATTCTCATAGACCATTTGTTTTATTTCTGCACATTTT-ATCTCGTACTTTTCTGTCTTTCTAAAACCCACAGCCTTTTATGTTACAACAACAGGACATTAACAG .:..:x..:...xx.:..:.::.::.x-..x...x.x....:x:...:.x....:---------..:.::::...x....x.:.x..:...---..::...x....:.x......-............x..........x:.:::........x.......x..........x...::xx:...:...:......:.x..........:....x...:x.......:..:x::....x:.x.......:.:.:.x....x.----...:.........xxx:...::.......:.x.....x:......x:......:.....:.............-....:..::.x.x:.:...x.xx.....x.xx....-.x...:.:..x....x:.:....:..x.. 27M1D27M9D27M3D21M1I145M4D73M1D36M1I29M 276/385 71.7% 387/94230402 0.0% 20/385 5.2% 80457193 NA +65068 chr4 + 190214555 118053722 118053721 118054897 1176 AACTGACTGTTTTATATTCTTTTCTATTTTTCAGACTGTATTTTCTGTGAGTCCTGATC-AAGTGATACAAATGAGCTGCAATGGTGACATAAACTCTTGACAGAGATTGGAAAAGTAGCTGGAACACCATCTTTTCTTTTAACTTTTTATGGTGCTTCTGTTG---GCATAGTTGGGGAAAGCACCTACAACATGAGTTTTATCATGAAGCTTCACAGACACTTTCAAAGAACAGTCATTCTGCTTGCCACTTTTTGTATGGTGAGCATTATCATTTCTGCTTACTACCTGTACAGTGGCTACAAACAGGAAAATGAACTCTCTGAGACGGCTTCAGAAGTTGACTGTGGCGACCTCCAACACCTACCATATCAACTAATGGAAGTGAAAGCAATGAAGCTTTTTGATGCCTCAAGGACAGACCCCACAGTCCTAGTATTTGTAGAGAGCCAGTACTCATCTCTTGGTCAAGACATCATTATGATTCTAGAATCAAGTAGATTCCAGTATCACATTGAAATTGCCCCTGGAAAGGGAGATCTCCCAGTGCTTATAGACAAAATGAAAGGCAAATACATTCTCATTATTTATGAGAATATTTTAAAGTATATAAATATGGATTCCTGGAATCGAAGCCTTCTAGATAAATACTGTGTAGAATATGGTGTGGGTGTCATTGGATTCCACAAAACTAGTGAGAAGAGTGTACAGAGCTTTCAGTTAAAAGGTTTCCCTTTTTCCATATATGGAAATCTTGCAGTAAAAGATTGTTGTATTAATCCTCATTCTCCATTGATTCGTGTGACCAAATCTTCCAAGCTTGAAAAAGGTTCTTTACCTGGAACTGACTGGACAGTTTTTCAGATTAATCATTCAGCCTATCAACCAGTAATATTTGCCAAAGTAAAGACCCCAGAAAACCTTTCTCCTTCCATCTCTAAAGGTGCTTTTTATGCCACTATTATACATGACCTGGGGCTTCATGATGGAATTCAAAGGGTTCTTTTTGGCAACAACTTGAACTTTTGGCTGCACAAGCTCATCTTCATAGATGCCATCTCCTTCTTATCAGGGAAGAGGCTGACATTGTCCTTGGACAGGTACATTCTTGTGGATATTGATGATATATTTGTGGGAAAAGAGGGAACAAGAATGAACACCAATGATGTAAAGGTAAGG chr4 - 94230402 37551125 37551124 37552287 56678116 56678115 56679278 1163 AATTAAATCTCTGATTTTCTTTTCT----TCTAGACTATACCTTCTGTAAAGCTTTGTGGAAGATAGATGTGTGTGCTGCAATGGTGACATAAATATTTAAGAGGACTGGAACAAGTTGTTGAGAATCTGTGTTTGTTTTTAA----------TGCTGCTGTTGAGAGCA-ATCTAAGACAAGTAA--ACAGCATGAGTTTTATCATGAAACTTCACAGGCATTTTCAAAGAACAGTTATTTTGCTGGCCACTTTTTGTATGGTGAGCATTGTTATTTCTGCGTACTACTTGTATAATGGCTACAAACAAGAAAATGAACTTTCTGAAATCTCTTCAGAAGTGGAATGTGGTGATCTTCCACTGTTTCCATACAAACTGATGGAGATGAAGACCATGAAGCCTATCGATCCCCTGAGGACAGATCTTGTAGTGCTGGTGTTTGTGGAAAGTCAATATTCAACATTAGGCCAAGATATAATAACCATTTTAGAATCTAGCAGATATCAGTATCACATTGAAATTGCATCTGGAAAAGGTGATCTCCCAGTGCTTATAGACAAAAATAAGGGCAAATACGCTCTCATAGTGTATGAAAATATTCTAAAGTATGTGAATATGGACTCTTGGAACAGAGGTCTTCTAGATAAGTACTGCGTAGAATATGGTGTAGGGGTTATTGGATTTTACAAAGGCAATGAGAACAGCTTGCAGAGCTTTCAGTTGAAGGGCTTTCCTTTCCACATCCACAGCAATCTGGGTATTAAGGACTGTTGCATTAACCCTTATTCCCCATTGCTCCATGTGACTAAATCCTCTAAGCTTGAGAAAGGTCCTTTGCTTGGAAATGACTGGGCAATTTTCCAGATTAATCATACAGCTTACCAACCAGTGATATTTGCAAAAGTAAAGACACCAGAAAACCTTCTGCCACCTGCTGCTAAAAGTGCTCTCCATGCCACAGTAATTCATGACCTGGGTCTCCACGATGGGATACAACGAGTCCTTTTTGGCAATAACTTGAATTTTTGGCTGCACAAGCTGATTTTCATAGATGCCATCTCTTTTCTGTCTGGAAAGAAGCTGAAACTGTCCTTGGATAGGTACCTTCTGGTTGATATAGATGACATCTTCGTTGGGAAGGAAGGAACAAGAATGAATGCCAATGATGTACAGGTAAAG ..:.:.x.x.:.x..x.........----.::.....:..::......:.:x.:.x:.x-...xx.x.::x:..x...................:x:..:.x..::x.x.:.x....x.:..::.xx.::.x...x:......----------....x......---...-.x:.::.:x...:.x--...:..................:........:..:..............:...:....x........................:.:........x......:....:.:............:...........:.....:.:xx..........x..x.....:..:..:.x..xx:.x.....:x....:.....::....::.x.......:.x.:...x..:::........:.::::...x..:..:.....:..:..:..:..:...x.x:.x..:.....:..x..x.:x...:.......x..:....x:....................x:.......:..x.........................xx..:.........::......x:.x.....:......:........:.:........:..:.....:x..:.:...........:.....:..............:..x..:........::.....:x:.:......x..:x.:..............:..:..:..:.....::x...x:.::.x.....x.xx:.x..:..:.....:.....:...:....:......x.:.:......:.....:..:........:......:....:.:.....x.......:..:....:............x....:..:........:........x...........x............::x..x:.::::x.....:.....:.::.......x:.x..x...........x..:..:.....:..x...x.:..:...........:........:.................x..:.................:..::.:..x..:....:.....x.:..........:......x....x..x.....x.....:..x..:..x..:..:..:..............::...........x......:. 25M4D30M1I83M10D11M3I3M1D15M2D992M 894/1159 77.1% 1163/94230402 0.0% 21/1159 1.8% 80502597 NA +3722 chr4 + 190214555 118066038 118066037 118066169 132 TTCACTATTCTTTTGGATTAA--------AATATATATTTTATATATA---ACATATTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATATTAT chr4 - 94230402 48211430 48211429 48211568 46018835 46018834 46018973 139 TTTACTATTCATTTTGATAGGTTTGGACTAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACA----GCATATACCATATACGAT ..:.......x...x...x::--------..:x.x...:x...x....---..:xx.x.......x...:..:.:....x...x...............::xx...x..x:....x.:.:.----::.....::.....:x.. 21M8I19M3I70M4D18M 90/128 70.3% 139/94230402 0.0% 15/128 11.7% 69854608 NA +3477 chr4 + 190214555 118066049 118066048 118066164 116 TTTGGATTAAAATATATATTTTATATA--------TAACATATTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATAATATATTTTATATATTATATATATTATAT chr4 - 94230402 48211451 48211450 48211572 46018831 46018830 46018952 122 TTTGGACTAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACA--GCATATACCATATACGATCTAT ......:...xx.x...xx.x.x....--------...:.....x...:.xx.:........x.xx.....x......:::....x...:.....x:.:.--x:.....::.....::x.x... 27M8I65M2D22M 80/114 70.2% 122/94230402 0.0% 10/114 8.8% 69854598 NA +3595 chr4 + 190214555 118066081 118066080 118066265 185 TATTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATATTATATTT-----TATATATTATATATCTTATAT-----ATTATATTTTATATATTAT---------ACATAATATATTAT-ATATATTATATATTATATATATTATATATTATATATAT chr4 - 94230402 48211465 48211464 48211657 46018746 46018745 46018938 193 TATCATAT-CTATACATACGAC-TAATATATTCTATGTACTGTATAT---------TATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAATCACTGATTTTCTATATT-CCTACTACATAGAT ...:....-:....:...:x.:-.........:...:..:.:.....---------...x...............::xx...x...:....x.-----:.....::.....:xx.x...-----...:x..xx...::.x...---------......x..:.:x.-.x.x..:.:xx...x.x......-:x..:..:...x.. 8M1D13M1D24M9D37M5I21M5I19M9I14M1I23M1D14M 124/173 71.7% 193/94230402 0.0% 32/173 18.5% 69854616 NA +3701 chr4 + 190214555 118066104 118066103 118066224 121 TAATATATTTTATATATTATATATATTATATAATATATTTTATATATTATATATATTATATATTATATTTTATATATTATATATCTTATATATTATATTTTATATATTATACATAATATAT chr4 - 94230402 48211458 48211457 48211572 46018831 46018830 46018945 115 TAACCTTTATCATAT-CTATACATACGAC-TAATATATTCTATGTACTGTATAT--TATCTTTTATATATTATATGCCATATTTATCATATATCACA--GCATATACCATATACGATCTAT ...:x.x.x.:....-:....:...:x.:-.........:...:..:.:.....--...x.x......x......:::....x.x.:......:.:.--x:.....::...:.::..x... 15M1D13M1D24M2D41M2D22M 82/115 71.3% 115/94230402 0.0% 6/115 5.2% 69854646 NA +4119 chr4 + 190214555 118066118 118066117 118066315 198 TATTATATATATTATATAATATATTTTATATATTATATATATTATATATTATATTTTATATATTATATATCTTATATATTATATTTTATATATTATACATAATATATTATATATATTA-TATATTATATATATTATATATTATATATATTATATATATTATATATTATATATATTATATATATTATGTATTATATATAT chr4 - 94230402 48211465 48211464 48211657 46018746 46018745 46018938 193 TATCATATCTATAC----ATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAAT-CACTGATTTTCTATATTCC-TACTACATAGAT ...:....x...xx----...::x:.x.......x...:..:.:........x...............::.x...x...:....x.:.:.xxx.....xxx...::x.x...:x..:.-.:x..x....::.x...xx.xx..xx.:..x.x..:.x...x.x.x.-:.:xx...x.x......x:-..:..:...x.. 14M4D100M1I47M1D19M1D12M 126/192 65.6% 193/94230402 0.0% 7/192 3.6% 69854653 NA +3345 chr4 + 190214555 118066125 118066124 118066325 201 TATATTATATAATATATTTTATATATTATATATATTATATATTATATTTTATATATTATATATCTTATATATTATATTTTATATATTATACATAATATATTATATATATTATATATTATATATATTATATATTATATATATTATATATATTATATATTATATATATTATATATATTATGTATTATATATATTATATATATT chr4 - 94230402 67909970 67909969 67910155 26320248 26320247 26320433 186 TGCACTGTATTGTCTCTTTTACATTTTAGGAATA----AAATCACACTTAATTTTTCATAC----TAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATAC--TAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTA-----TATACATGTGAGATAAATT .::.:.:...x:.x.x.....:..x...x:x...----.x..:.:.:..x..x.x.:...:----..x.x.xx..x.x.x..:xxxxx.:.x:.x.x.....:.....:x...:--..x.x....xx...xxx...:...x..x.......:.....x:.......x....:..x..-----....:..:.x.x...x... 34M4D23M4D49M2D61M5D19M 121/186 65.1% 186/94230402 0.0% 15/186 8.1% 50156155 NA +3691 chr4 + 190214555 118066135 118066134 118066262 128 AATATATTTTATATATTATATATATTATATATTATATTTTATATATTATATATCTTATATATTATATTTTATATATTATACATAATATATTATATATATT-ATATATTATATATATTATATATTATATA chr4 - 94230402 19453150 19453149 19453275 74777128 74777127 74777253 126 AATATGCTTGA-ATAGTAGCTAAGTAATACTTCATATCATATATATAATGTATAAATAACATTGTACTTTACATATTGTACAAAATATA-TACATTTATTAATTTACTGTATACATT-TTTATTTTATA .....::..x.-...x..xx..x:.x...:x.:....:x.......x..:...xxxxx.:...:..:....:.....:....x......-..:..x....-..x..:.:....:...-.x....x.... 11M1D77M1D10M1I16M1D11M 90/125 72.0% 126/94230402 0.0% 4/125 3.2% 98612985 91601570 +3729 chr4 + 190214555 118066148 118066147 118066293 146 TATTATATATATTATATATTATATTTTATATATTATATATCTTATATATTATATTTTATATATTATACATAATATATTATATATATTATATATTATATATATTATATATTATATATATTATATATATTA-TATATTATATATATTAT chr4 - 94230402 48211465 48211464 48211596 46018807 46018806 46018938 132 TATCATATCTAT-ACATACGAC---TAATATATTCTATGTACTGTATATTATCTTTTATATATT-------ATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ...:....x...-.:...:x.:---.x.......x...:.x:.:........x...........-------....:::....x...:......----:.:.x:.....::.....::x.x...:x..:.-.:x..x....::.x... 12M1D9M3D39M7D22M4D32M1I17M 94/131 71.8% 132/94230402 0.0% 16/131 12.2% 69854683 NA +3462 chr4 + 190214555 118066155 118066154 118066324 170 TATATTATATATTATATTTTATATATTATATATCTTAT-ATATTATATTTTATATATTATACATAATATATTATA-----TATATTATATATTATATATATTATATATTATATATATTATATATATTATATATTATATATATTATATATATTATGTATTATATATATTATATATAT chr4 - 94230402 67909970 67909969 67910143 26320260 26320259 26320433 174 TGCACTGTATTGTCTCTTTTACATTTTAGGAATAAAATCACACTTAATTTTTCATACTAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTAT-TAGAT-ACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT .::.:.:...xx.x.x.....:..x...x:x..xxx..-.:.:.xx.....x:...:..x.x.x:..x.:.x..:-----.::x:xx.x.....:.....:x...:xxx.x.....:...-..x..-.:...x..x.......:......x...:...x....:..x......:.. 38M1I36M5I40M1D5M1D49M 110/168 65.5% 174/94230402 0.0% 8/168 4.8% 50156185 NA +3502 chr4 + 190214555 118066208 118066207 118066290 83 TATTATACATAATATATTATATATATTATATATTATATATATTA--TATATTATATATATTATATATATTATATATTATATATAT chr4 - 94230402 67910059 67910058 67910143 26320260 26320259 26320344 85 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT .....:.:...xx...:..x.x....xx...xxx...:...x..--......:......x........x...:..x......:.. 44M2I39M 63/83 75.9% 85/94230402 0.0% 2/83 2.4% 50156149 NA +3148 chr4 + 190214555 118066219 118066218 118066299 81 ATATATTATATATATTATATATTATATATATTATATATTATATATATTATATATATTATATATTATATATATTATATATAT chr4 - 94230402 67910065 67910064 67910143 26320260 26320259 26320338 79 ATATACAATACTAAAAATATACTAT-TAGAT-ACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT .....:x...:xx.xx.....:...-..x..-.:...x..x.......:......x.......x....:..x......:.. 25M1D5M1D49M 61/79 77.2% 79/94230402 0.0% 2/79 2.5% 50156154 NA +3177 chr4 + 190214555 118066263 118066262 118066346 84 TATTATATATATTATATATTATATATATTATATATATTATGTATTATATATATTATATATATTATGTATTATATATATTATATA chr4 - 94230402 67910059 67910058 67910140 26320263 26320262 26320344 82 TATTACATATACAATACTAAAAATATACTAT-TAGAT-ACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATA .....:.....:x...:xxx.x.....:...-..x..-.::..x..x.......:......x...:...x....:..x...... 31M1D5M1D46M 62/82 75.6% 82/94230402 0.0% 2/82 2.4% 50156204 NA +3630 chr4 + 190214555 118066338 118066337 118066455 118 TATTATATATCATATATCATATGTTATATATTATATATCATATATCATATGTTATATATTATATATCATATATCATATGTTATATATTATATATCATATATCATATGTTATATATTAT chr4 - 94230402 48211486 48211485 48211596 46018807 46018806 46018917 111 TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATT-----TATCATATATC--ACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ..x.....x::..:..:::...:....x.x........:....::.....x-----...:.......--.:.x.....:::.....:x..x...x.xx:..::x...x...::.x... 51M5D11M2D49M 76/111 68.5% 111/94230402 0.0% 7/111 6.3% 69854852 NA +3653 chr4 + 190214555 118066345 118066344 118066482 138 TATCATATATCATATGTTATATAT--------TATATATCATATATCATATGTTATATATTATATATCATATATCATATGTTATATATTATATATCATATATCATATGTTATATATTATATATACATTA-TATATGTTATATATTAT chr4 - 94230402 48211458 48211457 48211596 46018807 46018806 46018945 139 TAACCTTTATCATAT-CTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATT-----TATCATATATC--ACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ..x.x.x........-:....:..--------.....x::..:..:::...:....x.x........:....::.....x-----...:.......--.:.x.....:::.....:x..x...:x..:.-.:x...x...::.x... 15M1D8M8I48M5D11M2D31M1I17M 93/130 71.5% 139/94230402 0.0% 17/130 13.1% 69854887 NA +3301 chr4 + 190214555 118066846 118066845 118066970 125 TTATATATTATATA--TACATTATATATAACATGTTATATATTATATATACATTATATATAACATGTTATATATTATATATACATTATATATAACATGTTATATATTATATATATATATATAGTGCT chr4 - 94230402 62183547 62183546 62183672 32046731 32046730 32046856 126 TTAGATATTACACAAATACATTTGTTAGAATTTAT-ATGCATTATACATATATTATATATTACATAATAGTGTGTATACATACATGATGTTCAATAATATAATTATAATTTGTACTTTTATAGCACT ...x......:.:.--......xxx..x..:x.:.-..::......:...:.........x....:x..xxxxx....:......x..:.x:..:.xxx..xx...x..x.:..:x.x.....::.. 14M2I19M1D91M 83/124 66.9% 126/94230402 0.0% 3/124 2.4% 55883299 NA +8287 chr4 + 190214555 118104945 118104944 118105134 190 AAAAGGATATATCTTTTGGAAACTTTTTA---------ATGCCATT-CTTTACCTGATACATTTTTTAA--ATTATGTATT----------TCAGGCCCTGCTTGATACTCAGAATCTTTTGCGTGCACAAATCACAAATTTTACATTCAACCTGGGATTTTCAGGGAAATTTTACCATACAGGTAAGAAAAAGGGATT--AACTGTTCTCATT chr4 - 94230402 37575125 37575124 37575338 56655065 56655064 56655278 214 AAAAAGATGTATGCCTTTAAAACTATTTATATTGTTAAATGTAATTTCTGCACCAAGTGTAGTTTTCTACGGTTATATGTTGGTTTATTTTTCAGGCCTTGCTTGACACTCAGAATCTTTTGAGAACTCAGATTACAAATTTTACTTTCAACCTGGGATTTTCAGGGAAATTTTATCACACAGGTAAGAATGGAAAACTAAAATTACTTTCATT ....:...:...x::..x:.....x....---------...:x...-..x:...x::.::.x....:x.--:....:.:..----------.......:.......:...............x.x:.x..:..:...........x.............................:..:...........x:::::.:.--..:.::.:..... 29M9I8M1I22M2I10M10I108M2I13M 145/190 76.3% 214/94230402 0.0% 24/190 12.6% 80529820 NA +3228 chr4 + 190214555 118106421 118106420 118106503 83 CTGCAGCCTCAACCTCCTAGGCTTAAGAAATCCTCCCACCTCAGCCTTTTGAGTAGCTGGGACTACAGGCCCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:.....:x..x..:..:..:.:...x:x.:.x.xx:x..........::.........:......x.:x..--....::.. 73M2D8M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 99909295 90305260 +12864 chr4 + 190214555 118114804 118114803 118115001 198 AGGAACTGAAGAGGAAGATGAAGGAGATGACTGTCTGTTGGGGTCTGTGGATGAGTTCTGGTGGTTTCCTCACATGTGGAGCCATATGCAGCCCCACCTCTTCCACAATGAGTCATCTTTGGTGGAGCAGATGATTCTCAACAAAAAATTTGCCTTAGTAAGTAA----CTCACTTTGTTGCATTGAAGTAGTGTACACTGA chr4 - 94230402 37578779 37578778 37578979 56651424 56651423 56651624 201 AGGCACTGAGGAGGAAGATGAAGGCGATGACCTGCTGCTGAGATCTGTGGATGAGTTTTGGTGGTTTCCCCATATGTGGAGCCACATGCAGCCTCATCTCTTCCACAATGAGTCGTCACTGGTGGAGCAGATGATCCTCAATAAAAAATTTGCCTTAGTGAGTAATATTTTTGCTTT-TTGTATTGAATTTAGGTATTCAGA ...x.....:..............x......:xx...:..:.:..............:...........:..:...........:........:..:.................:..x:................:.....:.................:.....----:.::....-...:......x.x:x...:x.x.. 165M4I8M1D24M 165/197 83.8% 201/94230402 0.0% 5/197 2.5% 80536025 NA +3058 chr4 + 190214555 118126493 118126492 118126562 70 TTATACTGTGTGTATGTATGTGTATATATATATATATATATACACATATATATATATATATACACCTCAT chr4 - 94230402 49414746 49414745 49414811 44815592 44815591 44815657 66 TTATATTGTGTGTATGT----GTAGACAGATATACACACATCCATATGTATGCACACACATAGTCCTCAT .....:...........----...x.:.x.....:.:.:..x..:..:...::.:.:.:...xx...... 17M4D49M 49/66 74.2% 66/94230402 0.0% 4/66 6.1% 68711747 NA +3194 chr4 + 190214555 118126508 118126507 118126584 77 GTATGTG--TATATATATATATATATATACACATATATATATATATATACACCTCATAATATACCTCACTTTCTTTATC chr4 - 94230402 11891909 11891908 11891987 82338416 82338415 82338494 79 GTATGTGATTAAATATACATGTCTATCTAGATATGTGTGCATATATACACACTTTATAATATAATTTTCTTCTCTCCTC .......--..x.....:..:.x...x..x.:..:.:.::.......:....:.:........x:.:x...:::.:x.. 7M2I70M 54/77 70.1% 79/94230402 0.0% 2/77 2.6% 106234599 83979956 +13076 chr4 + 190214555 118138039 118138038 118138246 208 TTTGCTTGGTCTTAGGAGCACGGCATTCCAACGGACATGGGCTACGCTGTGGCCCCTCACCATTCGGGCGTCTACCCTGTACATGTTCAGCTTTATGAGGCCTGGAAGAAGGTCTGGAATATTAAAATCACCAGCACTGAAGAATATCCACATCTGAAGCCAGCTAGATACCGGAGGGGTTTTATCCACAAAAACATCATGGTGAGCT chr4 - 94230402 37582984 37582983 37583191 56647212 56647211 56647419 208 TCTGTTGTGTTTTAGGAACATGGTATTCCAACTGATATGGGCTATGCAGTGGCTCCTCACCATTCTGGAGTATATCCAGTGCATGTTCAACTTTATGATGCCTGGAAAAAGGTCTGGAATATCAGAGTTACTAGCACAGAAGAATACCCACATCTGAAACCTGCGAGGTATAGACGAGGCTTCATCCACAAAAATATAATGGTGAGTT .:..:.xx..:......:..:..:........x..:........:..x.....:...........x..x..x..:..x..:........:........x........:..............:.:.:.:..:.....x........:...........:..x..x..:..:x.:x.:..:..:...........:..x........:. 208M 165/208 79.3% 208/94230402 0.0% 0/208 0.0% 80555055 NA +9000 chr4 + 190214555 118143522 118143521 118143692 171 AAGCTTTTCCTTACTTTTTTCATTTTTCCTTCAGGTTCTCCCAAGACAAACCTGTGGGCTTTTCACTCACACCATTTTCTACAAAGAATATCCAGGGGGTCCTAAAGAGCTGGATAAGAGTATCCAAGGAGGAGAACTTTTCTTCACTGTCGTCCTCAACCCTGTAAGTAC chr4 - 94230402 37586617 37586616 37586787 56643616 56643615 56643786 171 AATCTTTTGTTGCTTTTTTTTAAATTAAATTCAGGTGCTTCCTAGGCAAACTTGTGGCTTATTCACCCACACTATTTTCTATAAAGAGTATCCTGGAGGCCCAAAGGAACTAGACAAAAGTATCCAAGGTGGAGAGTTGTTCTTCACGGTGGTTCTCAATCCAGTGAGTAC ..x.....x:.xx:......:.xx..xxx.......x..:..x..:.....:.....x:.x.....:.....:........:.....:.....x..:..:..x..:..:..:..:..:...........x.....::.x........x..x..:.....:..x..:..... 171M 128/171 74.9% 171/94230402 0.0% 0/171 0.0% 80556905 NA +9380 chr4 + 190214555 118209237 118209236 118209576 340 CTTAAAAAAGGATGTCT--ATTAATTAATCATTTTTAAATCTATCATAAGAAGTAACTGTATTCATTATTCTGTCACTTTCTAACACTAAAGGAAGAAGAACAGCTGTTGTCTGGCCTCTAACTAACTGCAATGGGGTCTTTCAGAATAATACAGAAAGAACATTAGAACAGCATGAGCAAGATACACAATTCAAAATTAATCGAAA-ATTGGTGATCTGAGAACTGGAGATGTTCTCATGACATGTAAATATTTGTTCAGCAGCTAAAGTAATAGCAATGCATTAAACCAATAG--AATTACTTTTGACACCTAACAGAAATGTTAATTGATCATCAATCTTTA chr4 - 94230402 37593525 37593524 37593866 56636537 56636536 56636878 342 CTTAAGGGAATATGTTTCAACCAATTAATAATATATGT-TCAAGCATAGACTGTGATCTAATTTCTTATTCTATCACTTTGTGAGTCTAATGGAGGAAAGCCTGATATTCCTGAGTCTCTGAATACGTGAAACAACATTCTTTTGAGTAATATGGAGACAGTATCAGAACTGTAAACAGAGTGTACACAATGCCAAATTAATTGGAATATAGGTGTTCTGAGAGTTAGACATACTCTTGTGGCCTGTAAATATTTGTTCAGTAGCTAAAATAGCAACAATATGCTAAATTGGTAATCTATCTGTTCTCGTGCCTAGCAGAGTTTTT--TCTATCACCCATATTTA .....:::.:x....:.--.::.......x..x.x.:x-..x.x....::xx..:.::xx...:x.......:.......x.:.xx....x...:...::x.x.x.:..x::x:.:....:.x..xx..x..:::x:.::..:x..:.....::..:.x.::..:.....x.:.x:x:x.:x:........x.x........:.:..-..x....x.......::.:..x..::...::..:.x.................:.......:..::.:....::::....::::..:--x..:xx..:.x:::....:....:x.x..--.:x....:.x..x.... 17M2I19M1D168M1I87M2I29M2D17M 212/337 62.9% 342/94230402 0.0% 8/337 2.4% 80615712 NA +11337 chr4 + 190214555 118221864 118221863 118222417 554 TAATTACTCATAGTGTGTTT------ATAGCAAAAATTGTTTTATAAATGCAATTGTCACTTCTATTGACACTT-TCCATCTCATTGGAATCTACAAGTATAATAAAAATAATTTATTTTGATCAATTTTCCATCTAAAAAAAAAAAAACAAAAATAAAACCTCAGTCCTGAAGCACTCTTAAAATTGTAAAAGTATCATCTTTAGGAAAAGACTAATATCTGCTTCTCCTGAACTAGCAGCCTTTTCAAGCCTTTTCTTTGTTTCTTTCTATGCTGTACAGAAATTGTTGTCAGGTGAGGAATTGCCAAGAAGTGAAATGACATTATAAATGTCATAGGTCAGTACACAGGTAAGGAAGAAAGACTGTCTAGAAAGCAAGCTAA-CTTTTTAACCAAAACATTCTTGTTATATATCTGTTT---TTGTCAATTATGTTCCTTAATGTGCATACCTTCCTAAGAAA--AAAGTAACAAAGAA-----AGAGAGGTTACATGTTCAGCAAAAGATATGCAATATTCCATGTCTATAGAAAATATTGTGATTCATGAAAAAAAAAAGTTCAAAA chr4 - 94230402 37595911 37595910 37596450 56633953 56633952 56634492 540 TAATTATCCATAAATTGTTTGATGTAAAAAAAAAAAAGACTGCATAATGGGAACTAAGATCTCT---GATATTTCTGCATTTCCTTGAAACAGTTTTGTATGATGGAAATGATTTATTATGACGCATCC-----------------AAACAATTTTTTAGCCTCCTTTCTAATATACT--TCAAATTACAACTA-ATTCCCTTCAGGGAAAAAATAATACGTATTTTCCCCAAACGAGGAATCTTTTCAAGTTCTTTTGCTTTTTCTTTCAATGCAGTGCTGAAGTTTTTGGCATGTAAGGAGTTGCCAGGAGGTGAACTGACTTGATAAATGTCAGAGGTCAACTCGTGTGGAAAAGAAAGAGGTTGTCAAGAAAGCAAGTTAACCTTTCTTACAGAACCACTCTGATTGTATCCTTGTTGAGAATGACAATCCAGTGGCT---GGTCTGTTCCTGCTTTAAGAACTGAAATAAAAAAGGAATCTTAAAAAGGTTATAGATTTGGCAAA--ATGCTTATTATTTGTTGCCAAAAGGGAGTATTTAG----GGGAGGAAAAGAAATGCAAAA ......::....:xx.....------.x.:x.....xx::.x:....xx.x..:.:xx.::...---..:.:..-.x...:..x...:..:xxx:xx....:..::....:.......x...:xx..::-----------------......xxx.xx.:....xx.:..:.x::...--.x.....::..xx:-..:x:...:...:...:.x.....:x.::..::..::...x..x.::.........:::...:x:.x........x....x..:.x...:..x...x..x..:....:......:..:.....x....x.x..........x......::x.:::x.x..:::.:.:..::....x..........:...-....:.x..x:..x..:...x:..:...x::....x---x..x....:xx..xx..---x..x::.x...x.:.x.::..--:..:...x....:.-----.:.:......:.x:..::.....--..::x:.x....:xx..:.x.x..::.:....xx.----:x..::....:..:.x..... 20M6I38M3D7M1I54M17D32M2D14M1D190M1I36M3I17M3D21M2I14M5I23M2D35M4D21M 334/522 64.0% 540/94230402 0.0% 50/522 9.6% 80625953 NA +13846 chr4 + 190214555 118224422 118224421 118224676 255 CTGTGATTATACTGCCCTCTAGTGTCAAAATAAATGTTATTTACACTGAAGTTCATT--TGCTTTTTTCAGATCAGCATTTTCATGACCCATTTGTCCAACTATGGGAATGACCGACTGGGATTATATACATTTGTTAATCTGGCCAACTTTGTGAAGAGCTGGACCAACCTGCGACTTCAGACTCTGCCTCCAGTACAACTGGCCCACAAGTATTTTGAGCTGTTTCCTGATCAGAAAGACCCTCTCTGGCAGGTA chr4 - 94230402 37597961 37597960 37598211 56632192 56632191 56632442 251 CTGTGATTACACTGCCATCTAGTGACACA------GTGACCCAACGTAAACTTTCTTGGTGTTTTTTGAAGATCAGCATCTTCATGACACACTTGTCTAATTACGGAAATGACCGCTTGGGGCTGTATACGTTTGTGAATCTGGCCAACTTTGTGCACACCTGGACAAACCTGAAACTGCAGACTCTTCCTCCGGTTCAGCTGGCTCACAAGTACTTCGAGCTATTCCCTGAGCAAAAGGATCCACTCTGGCAGGTA .........:......x.......x..x.------..x.:::.xxx.:..x..:x..--..:.....xx..........:........x..:.....:..:..:..:........x:....::.:.....:.....x..................x.x.x......x......x:...x........x.....:..x..:.....:........:..:.....:..:.....x..:..:..:..x............ 29M6D22M2I198M 196/249 78.7% 251/94230402 0.0% 8/249 3.2% 80626461 NA +9270 chr4 + 190214555 118226868 118226867 118227000 133 TGTTCTTCTCCCATTTAGAATCCTTGCGATGACAAACGCCACAGAGACATTTGGTCTAAAGAAAAAACTTGTGATCGCTTACCAAAATTCTTGGTAATAGGACCCCAGAAAACTGGTGAGAACTTTTTATGTT chr4 - 94230402 37600167 37600166 37600299 56630104 56630103 56630236 133 TGTTCTCCTCTACTTCAGAATCCCTGTGATGACAAACGGCACAGAGATATCTGGTCTAAAGAAAAAACCTGTGATCGATTACCAAAATTCTTGGTTGTAGGACCTCAGAAAACTGGTAAGAGTCTTTCCTATT ......:...:xx..:.......:..:...........x........:..:.................:........x.................x:.......:............:...:::...:x.:.. 133M 111/133 83.5% 133/94230402 0.0% 0/133 0.0% 80626701 NA +16321 chr4 + 190214555 118232941 118232940 118233205 265 ACTTTAAAGTGTTGATCATAGGAAAT-TGTGTTTTCATTTAATTAATTTCTGAACCTCTATTGTCTTTCTAGGTACCACTGCTTTGTATTTGTTCCTGGTTATGCATCCTTCCATCCTTAGTAACTCCCCCAGCCCAAAAACCTTTGAGGAGGTACAGTTCTTTAATAGAAATAACTACCACAGGGGGATTGATTGGTAAGATGGGTTATTAGTATAAATCTAAAAGTATATGTACTGTGCACAGTATAAACTTAGCACTAATATT chr4 - 94230402 37601042 37601041 37601307 56629096 56629095 56629361 266 ACTTGGGAGTACGACCCATAAAATATGTGTGTATATATATATTTTAATCTTAGACTTTTGTCCTATTTGTAGGTACCACCGCCTTGTATTTGTTCCTGATCATGCACCCTTCCATCATTAGTAACTCCCCCAGCCCAAAAACCTTTGAGGAGGTACAGTTCTTTAATAGAAATAACTACCACAGGGGGATTGATTGGTAAGATGGGTTATTAGTATAAATATAAAAGTTTATATATTGTGAACAATACAAAAATGACATTGCTGTT ....x::...::x:x:....::.x..-.....x.x:..x..x..x.x.::.::..:.:.:.:x.x...x..........:..:...............:.:.....:.........x.......................................................................................................x.......x...:..:....x...:..:...xx.::..:.:x.:.. 26M1I239M 214/265 80.8% 266/94230402 0.0% 1/265 0.4% 80631899 NA +13722 chr4 + 190214555 118237019 118237018 118237223 205 ATTTTGAGAAAAATATTCCTTTTCTAGGTATATGGATTTCTTCCCAGTCCCATCTAATGTCACTACCGACTTTTTGTTTGAGAAGAGTGCCAATTACTTCCACTCAGAGGAAGCCCCTAAAAGAGCTGCTTCTCTGGTTCCCAAAGCCAAGATTATCACCATTCTCATTGACCCTTCAGACCGAGCATACTCCTGGTACCAGGTA chr4 - 94230402 37604086 37604085 37604290 56626113 56626112 56626317 205 ATTCTGAAAATGATGTTCCTTTTCTAGGTACATGGATTTCTTCCCTACTCCTTCCAATGTCACCACTGACTTCCTCTTTGAGAAAAGTGCCAACTATTTTCATTCTGAGGAAGCTCCTAAGCGAGCTGCTTCCCTCATTCCCAAGGCCAAGATCATCACCATCCTCATTGACCCATCTGATCGGGCGTATTCCTGGTATCAGGTA ...:...:..x:..:...............:..............x:::..x..:........:..:.....::.x........:........:..:..:..:..x........:.....:x..........:..x:.......:........:........:...........x..x..:..:..:..:........:...... 205M 166/205 81.0% 205/94230402 0.0% 0/205 0.0% 80632933 NA +3006 chr4 + 190214555 118238123 118238122 118238252 130 GAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAGAAAAAAAGAAAGAAAA chr4 - 94230402 22042099 22042098 22042228 72188175 72188174 72188304 130 GAAAGGGTCTGAGTGAGAGACAAAAAAAAAAAAAAAAAAAGTGCAGAGAGGAGAAACCCAGAAAGGAAGTTACATAGAGAAACATTAAAGCAAATCTTCAGAGAAAATCAGGAGAAAACATGTCAGACAA ..:..:.xxx...x......x.:....:...:....:....x:x::.::::.....xxx......:...xx.x.x...:.:.x.xx..::x.:.xxxxx...:...:xx..:......x.x.xx...x.. 130M 78/130 60.0% 130/94230402 0.0% 0/130 0.0% 96196024 94018531 +3332 chr4 + 190214555 118238124 118238123 118238253 130 AGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAAAGAAAGAAGAAAAAAAGAAAGAAAAT chr4 - 94230402 4547819 4547818 4547950 89682453 89682452 89682584 132 AGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAAT ...x.x...:.:x......x....x.:.:.....x::::xxxx...:..........:::..:..xxx:..::x.....x...::...--.:...:.x..:...xxxx...:x...:.x...xx..x.:... 88M2I42M 81/130 62.3% 132/94230402 0.0% 2/130 1.5% 113690305 76524250 +3117 chr4 + 190214555 118238145 118238144 118238229 85 GAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:..:x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 81379852 NA +3021 chr4 + 190214555 118238146 118238145 118238232 87 AAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAA chr4 - 94230402 56098455 56098454 56098541 38131862 38131861 38131948 87 AACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAA ..x....:...x...:..xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx.::.::.xxx....:.... 87M 54/87 62.1% 87/94230402 0.0% 0/87 0.0% 62139691 NA +10228 chr4 + 190214555 118240518 118240517 118240696 179 TCATAGCATCAGCGATCACATGAAGACCCTGCAGCTCTGAAGTTTAGCTTCTACGAAGTGATCTCAGCAGGGCCCCGTGCACCCTCGGAGCTCAGAGCCTTGCAGAAGAGATGTTTGGTCCCGGGGTGGTATGCCAGCCACATCGAGAGATGGCTTGTTTATTTCCCCCCATTTCAGGT chr4 - 94230402 37605750 37605749 37605928 56624475 56624474 56624653 179 TTACAGCATCAGCGCTCACATGAAGATCCTGCAGCCCTGAAATTCAGTTTCTACCAGGTAATCACAGCTGGACCTCGAGCCCCTTCTGAACTTAGAGCTCTCCAAAAGAGATGCCTAGCTCCTGGATGGTATGCTACACATATTGAGAGATGGCTGACTTACTTCCCACCTTATCAGGT .:.:..........x...........:........:.....:..:..:......x.:..:...x....x..:..:..x..x..:..x..:..:.....::.x..:........::.:.::..x..:........:.xx..:..:...........x::...:.....x..x.x...... 179M 135/179 75.4% 179/94230402 0.0% 0/179 0.0% 80634768 NA +10027 chr4 + 190214555 118241775 118241774 118242169 395 TTTCTAAGCTCTCTTGGTCTTTCAACTGCC--TTTTTTGTTTTCATAGTG---TGACTTCTCAGACTGCAAACCTGAGTGTACTTAATTGGTGTGATTTATTTCTTATTCCAGGTCATTAATGAGGATGAC--------CTGGATTCTATCTAACACCAATGCATGCAATTCTGCTCAGGACAGTGTCTCTC-----ACTGAATGAGTTTAGAATGCAGAAATTTTTCATTATACAGTTTA-CATGTCTTTTTTCAATGTGCATTTT--TTTATTTGATAATTT--AGTTGCTAATTATTGATGGGCAACAACTAAGAACTGATCCTGCTACAGTGATGGATGAAGTACAGAAGTTTCTAGGAGTCTTGCCTCATTATAATTACTCAGAAGCTTTAACGTAAGTTTATATTCTAATTA chr4 - 94230402 37609238 37609237 37609613 56620790 56620789 56621165 376 TTTCTTACCCTTCCAGATTCTTCAG-TGCTATTTCTCTGTTGTCACAGTGGGCTGAATT-TCAGATT-------------TATTTAAT--GTGCCATTTACTG-TGCTCCCAGATCATTAATGATCATGACAAATAGAACTGGACT---------------------AATTAT---CTGGGAAGGTACTCTCCATGTAATGAAGGAGTCTGACAGAGGTGGAAGTTTCAGTTTGAAGTTTAACATAATGaattttaaattatatttccatttattttattttttGTAGTTGCTAATTATTGATGGACAGCAGCTAAGAACTGACCCATCTACTGTAATGGATGAAGTACAGAAATTTTTGGGAGTATCTCCTCATTATAATTACTCAGAAGCCCTAACGTGAGTTAATTTTATCATCA .....x.x.::..:x.:.::....:-...:--..:.:....x...:....---...x..-.....:.-------------..:.....--...:x.....:.x-.xx.:....:..........xx.....--------.....:.---------------------....x.---.x..:x..xxx.....-----.x....x....:.::x.x:x:x::.xx.....x.x.:x......-...:x:xxx...:..xx.::....:--.......x..xx...--...................:..:..:...........:..xx....x..:.................:...:.:.....x.:x.......................::......:....x..x..x.x..:. 25M1D4M2I18M3I6M1D7M13D8M2D13M1D27M8I7M21D6M3D16M5I44M1I25M2I15M2I132M 261/353 73.9% 376/94230402 0.0% 65/353 18.4% 80632537 NA +9205 chr4 + 190214555 118253458 118253457 118253607 150 TGATTTTCTGGTTTTTCTGTGTGTATTCTTTTTTTTTTTAGGTTTGATTCTCATAAAGGTTTCTGGTGTCAGTTACTGGAAGAAGGTAAAACAAAATGCCTTGGAAAGAGCAAAGGAAGAAAATACCCTCCAATGGATTCTGATGTAAGC chr4 - 94230402 37610747 37610746 37610896 56619507 56619506 56619656 150 TGAGTTTCTGCTTTGAACATGTGTTTAAATATTTGTTTCAGGTTTGATTCACATAAAGGTTTCTGGTGTCAGCTTTTGGAAGAAGGAAAGACCAAATGCCTTGGAAAGAGCAAAGGTAGAAAATACCCTCCTATGGATTCAGAGGTAAAC ...x......x...xxx::.....x.xxx.x...x...:...........x.....................:.x:..........x..:..x.......................x..............x........x..x....:. 150M 124/150 82.7% 150/94230402 0.0% 0/150 0.0% 80642711 NA +22312 chr4 + 190214555 118255537 118255536 118256247 711 GTATGAAATGTAATAAACAAAATAAAATGTACTTTTCTCTCCTCCTCTCCACTTAGAGCAGGACATTTCTGTCAAGCTACTATCGAGATCACAACGTGGAACTCTCAAAGCTGCTGCACAAACTGGGTCAGCCTCTGCCATCCTGGCTGAGACAGGAGCTGCAGAAAGTAAGATAGCACTGAGAGAAAA----CTTGAGA---CTTCATCGTCCATGTAGAACACACCTTTTCCAAAGCTTCCAGAAGCTACCAAAAGGCAGTTGAAAAATATACCTCTTCAAATGAGAAAAAAGAACAG---TTTCTTCCATGTGCTGGCACGTGGATGATTAGAAAAAAAGAAAAAGTATGTGTTAC-AAGCCTTGAGGCCTGTGGC----CTTTCTCTTAACCCATATCTGAGCCTGTGGGATTATTGTAGACTACTGTGCACTCATGTGGAAGTCAATTGCAACCAACATAAATATCAAACACAAATGCAGAACTGTTCCATTTCATAGT-AATATTTACACTTTTATATATCAACT----AAGATTGTGTCTC-TGTAGGTTTT-TAGACCACTGTTTGCCTGTACGATGTTTTC-TTATTATTTTATTCTATAAAGTGTCCT--ATGAAACAAGAAGCAAAATAAACATCACAATGTAGCATAAAATGTCAAAAGCATAACACCCA-TGAAAAATGCTTGCCAAAATTTAAATCCACTTAAGTATTTAGAAATAATTGTAA chr4 - 94230402 37612574 37612573 37613247 56617156 56617155 56617829 674 GCACGACattttattaaataaaaaatatCTGCGTTTATATCCATC---------AGTGCAGGGCTTTTCTGTCAAGCTACTACAGAGATCATAATGTGGAACTGTCAAAACTCCTACACAAACTGGGACAACCTCTGCCATCGTGGCTGAGACAGGAACTACAGAAAGTAAGATAGCATTGAAAGAAGATATTTTTGAAATCTCTTCCACACTTCTGT------CATCCTACCCAAAGTCTTCAGTAGTTACCAGAAAGTC-TTGTAAAATATACCTCTGCAAAAAATAGTAAAAGACAGAAATTATTTCCATATGCTGGCATGTGGATTGT----------GAAAATACACGTGTTTCTTAGCATTCTGG--TGGGACAAATCTTTCTCATAA-ATATTTCTGGGCCTGTGGA---GTTGTGGACTACTGTGCACATATGTGGAAGTTAACTGCAGCTGGTATAAGCTTCAGAGATACAT---GACCTGTCCAATTTCACGGTAAATACTTACATTTTTATATATCAGTTTAAAAGTATTGTGTCTCATGTAGGTTTTGTAGCCCACTGTCAGACTGC----TGTTTTTATTAGTATTTGATTAT----CGTGTCTTGCATAAAATAAGAA-----------AATTTAATGTAGCATAAAATGCCAAGTGTACTTCTGCCATTGGAATCAGCTTGCTAATAC---------CTGAAGTATATTCTAATAAGTGTGA .:.:..x..x.x..x..xx...x..x..x.:.x...x.x...x:.---------..x.....:.x.................:x.......:..:........x.....:..x..:...........x..:...........x..............:..:.................:...:....:.----:....:.---....xx.::::x...------..:.:.x:......::.:...x..:.....:..:.:x-...x.............x....x:.x.:x...::....---..x:......:........:......x:.----------.....x::.:.....x.-x...x..xx..--..x.:.----.......x...-x:..x....:........:---:....:.............x:..........:..:....:.::::....::x...:.x.:.x..---..x....:.x......::..-....:.....:............::.----.:x..........-..........-...x.......:x.x...:----......:-...x.....x...x.----x.....:.--..:...:.....-----------.x:x:................:...:x.:.:xx.xx...-..:..xxx......:..x.:---------..x......x.xxx.....x...:. 45M9D135M4I7M3I15M6D37M1D38M3I29M10D17M1I11M2D6M4I11M1D19M3D64M3D20M1I26M4I13M1I10M1I19M4D7M1I15M4D8M2I12M11D39M1I20M9D25M 489/648 75.5% 674/94230402 0.0% 89/648 13.7% 80642963 NA +12915 chr4 + 190214555 118258411 118258410 118258632 222 TGTATAGAATTCCCTTTTTCATTGTTTAAAATA-TGAAACTTCCTCAGGAAGAAATGAAATGGTTATTTCAATGTTTATAGCTGTAATATTCTTGTCATTCACATTGAATGAAAATTACTGGAAACATTTTTTTCTCTGAGTTTTTTAAAATAAAAAACCTAGATATAATTCTGATAGTAGCATGGTACCTCATATGTACAACAATAAA--CTGATAGGAAAATG chr4 - 94230402 37616386 37616385 37616604 56613799 56613798 56614017 219 TGTACAGCATATCCTTTCTCATTGCTTAAAGAAGTGGGACTTCCTCAGGAAGAAAGTAAATAGATATTTCAATGTTTATAGATGTAATACTCTTGTCATTCACATTGAATGAAAATTGCTGGAAACA--TTTTTCTCaaaaattttttaaataaaaaa--tagatattattCTGATAGTGGCATGGTATCT--GAAGTGCAACAATAAAGTCTGTTAAGAAAATG ....:..x..x:.....:......:.....:x.-..::.................xx....:.x.................x.......:...........................:.........--........x:.:x.....x..........--.......x...........:........:..--x.x..:..........--...x..:....... 33M1I93M2D29M2D31M2D16M2I14M 186/216 86.1% 219/94230402 0.0% 9/216 4.2% 80642025 NA +5921 chr4 + 190214555 118279190 118279189 118279317 128 CTCCATGTATCTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATATCCTTGTTTATTGGCAAAGCTGTCACCATTTAATTGGTATCAGATTCTGACTTGCACAAGTAACA chr4 - 94230402 37618569 37618568 37618696 56611707 56611706 56611834 128 CTCCATGACTCCATGGGGGCTGCCGCTCGTGGCTGTCCCCCTTCCTAGGCATGGAAGAGCAGCTTCTTGCTAATTGGCAAAACTTCTACCATGGCGTTGGTAGTAGTCGTTGACTGTGGCAAGTAACA .......xx..:x....:x...:.:x:......x...:..........x............xx.:....:.x.........:..x::.....xxx:......x:..x:x:.....xxx:......... 128M 92/128 71.9% 128/94230402 0.0% 0/128 0.0% 80660621 NA +20762 chr4 + 190214555 118281936 118281935 118282253 318 TTACAGTTTGGTGACACTTTTTATCCAAGGTACAAAGGCTGAGACTTTGGTATAAACACCAGGAGAATCCTTGACTCCACAGCCATACCCCCAGGAGGTCACCCCATACACCACCCAGCTCTCTCCGGGCCGTTCACACATGAGTGGTCCTCCGCTGTCTCCCTGGCAGCTGTCCACGCGTTTGTGTTCATGGAGGTTTCCAGCACAAAGCATTCTCCCTGTAAACCGACCCTTATAACGTTCTTCACAAAACCTTTTAGGAAGTAAGGGAATGGCTGCTTGTTGTAGTGTTCTTGAATAGGCTCGTCCTACTCAGAC chr4 - 94230402 37623172 37623171 37623489 56606914 56606913 56607231 318 TCATAGTTTGGTCACACTCTTTATCCAGGGTACAAAAGATGAAACTTTTGTGTAGACACCTGGAGAGTCTTTCATTCCGCAGCCATAGCCCCAGGAGGTCACACCGTACACAACCCAGCTTTCCCCTGGACGTTCACACATCAGTGGTCCTCCACTGTCCCCTTGACAGCTATCGATGCGTTTCTGTTCCTGGATGTTTCCAGCACAGAGCATTCTTCCTGTGAATCTTCTTTTATAACGCTCCTCACATACCCTCTTGGGAAGTAAGGGGATGGCAGCTTGTTGTAGTGTTCTTGAATAAGCCCTTCCTGAAAAGAC .:.:........x.....:........:........:.x...:.....x..:..:.....x.....:..:..x.:...:........x..............x..:.....x........:..:..x..x...........x...........:.....:..:..:.....:..x.:......x.....x....x............:........:.....:..:.xx.::........:..:.....x.x...:..:...........:.....x.......................:..:.x....:xxx.... 318M 259/318 81.4% 318/94230402 0.0% 0/318 0.0% 80658764 NA +19322 chr4 + 190214555 118282826 118282825 118283117 292 CTTACCTGTGTCACCCCATCCTGTTATGTAACAGTTGGATGCTGTTTTCTGTGGCCTCTCTCTCCAGAGTGGTAAACAGGCTGGCAAAACATGGCTGCTGAATCTGGCACATTGCTCTTCTGGTCCTTGTAATCTAACCAGGGCTATGTCATAATCACTGCGGTCGGGTCGATACTCCCGATGAATCACAATCTGTTGAACTCCAATTTCTTCCTCAAACTCCTCTGGTACCAGAGTATGATAATCTCCAACCCTAACAGCATAGCTCCTAGTGCTGTTGCCATACCTGAGA chr4 - 94230402 37625401 37625400 37625692 56604711 56604710 56605002 292 CTTACCTGTGTCACCCCATCCAGTGATGTAACAGTTAGGAGCAGTTTTCTGTGGTCTCTCTCTCCTTAAGGGCAGGCAGGCAGGTAAGACATGGGTACTGAATCTGGCACACTGTTCCTCTGGCCCCTGTAGCCTCACTAGTGCAATGTCATAGTCACTACTGTCAGGCCTGTACTCCTTGTGCATCACAATCTCTTGGACTCCAATTTCTTCCTCATACTCTTCTGGTACCAGCGTATGATAATCTCCAACTCGCACGGCATAGTTCCTAGTGTTATTGCCATACCTGAGA .....................x..x...........:.:x..x...........:..........xx.:x..:.::.....x..:..:......x.:..............:..:..:.....:..:....::..x..:..x..x........:.....:.x...:..:.x:......:x:..x..........x...:..................x....:...........x.................:.xx..:......:........:.:............... 292M 239/292 81.8% 292/94230402 0.0% 0/292 0.0% 80657425 NA +8636 chr4 + 190214555 118294901 118294900 118295078 178 GAAGCTACACTAGGTTGTTTGGGAAGGTGGACACATACCTCTTGAAACAGTGTGCTGCTGTGAGGACCCAGCAGCTACTCAGGAGCGTAGCCCCGCAGAGGAGCCTGCCATCTCCATGGGATGACTTCAGCCGGAGGGAAACCTGCCAAGGCCAACCACCCCTAAGAAGAAAATGAGC chr4 - 94230402 37629838 37629837 37630010 56600393 56600392 56600565 173 GAAAATACACTTTACTGTTAAAG-----GGAGACCAACCTTTTAAAGCAGTGTGCAGCAGTGAGGACCCAGCAGCTACTAATGAGAGTAGCACCACACAAGAGTCTTCCATCTCCATGAGACGATTTAAATCGGAGTGCAACCTGCCATGGCCAACCGCCCCTACAGAGAGCATAGAC ...:x......xx::....x::.-----...x..xx....:..:..:........x..x....................x.x...x.....x..:..x.:...:..x...........:..:..:..x.::.....x.x.........x........:......x::...:x..:::. 23M5D150M 129/173 74.6% 173/94230402 0.0% 5/173 2.9% 80665063 NA +6650 chr4 + 190214555 118295750 118295749 118295867 118 AAAAAATCTCTTTTGGAGGAACATTTACCTTAAAGAATTTTTCCCACCAATGATCCGCTTCTGCCGACGGTGCAGTAATCTCAAGCCACAAACAGATGAGAGGGACTCTGAAGCAGAA chr4 - 94230402 37631977 37631976 37632094 56598309 56598308 56598426 118 AAATGACATTTTTTTATCAAATATTTACCGTAAAGAATTTTTCCCACCAATTATTCGCTTTTGTCGACGATGTAGTAACCTCAATCCACAAACAGAAGCAAGAGAATCTAAGACAGAA ...x:.:x.:....x:xx:..:.......x.....................x..:.....:..:.....:..:.....:.....x...........x.x:..:..x...:.::..... 118M 90/118 76.3% 118/94230402 0.0% 0/118 0.0% 80663773 NA +14725 chr4 + 190214555 118298705 118298704 118298962 258 TTGTTTAGGGCTCCAGAAGGTGACTTACCTTTATTACTGTTACCTGAGGCCTTCTTGCCAAAATAATCACAAATAACTCCTGCATCTTCACTGTGGCGGCAGTTGTGTCTTCCAATATCTTGCTTGATACAGTCAGCCAAGGACCTCTCATTTCCTGTGCACTTCACATTATCCACATGGATGGGTCCTTTTCCTTCTCCAAAGTAAGCCATGGTTCTTGCTCTGGCAGGACCCCTGAAGACAGAACA------------TTCTTAATCA chr4 - 94230402 37632717 37632716 37632986 56597417 56597416 56597686 270 TCGTCTACTGCTCAAAACAGGACTTCACCTTTGTTGCTGTTCCCAGGGACCTTCTTGCCTAGGTGGTCACAGATGACGCCTGCATCCTCACTGTGACGGCAGTTGTGTGTTCCAATGTCCTGCTTAATGCAGTCTGCCAAGGATCTCTCACTTCCAGTACATTTTACATTATCCACGTGGATTGGGCCTTTGCCTTCCCCAAAATATGCCATTGTCCTTGCTCTTGCTGGACCTCTGGAAACAAAATACATTTTTTTTTTTTTTTAATCA .:..:..xx....x.:.x:.x:x:.:......:..:.....x..x.:.:..........x.::.::.....:..:..x........:........:............x.......:..:.....:..:.....x........:......:....x..:..:..:...........:.....x..x.....x.....:.....:..x.....x..:........x..x.....:...:.:...:..:.------------..:....... 248M12I10M 200/258 77.5% 270/94230402 0.0% 12/258 4.7% 80665988 NA +3136 chr4 + 190214555 118304128 118304127 118304221 94 GTGTGTGTGTGTATCTGTATATATGCATACATGTG-TATATGTATGTGTGTATGTGTGCATATATGTGTGTGTATATATACATATACACACATAT chr4 - 94230402 35554922 35554921 35555016 58675387 58675386 58675481 95 GTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT ..:...x.x.x.:...x..:.xx.x:.x::..:x.-..x..:...x..x..:........:.....x....:.......:....:.x.x.::.:. 35M1I59M 63/94 67.0% 95/94230402 0.0% 1/94 1.1% 82749206 NA +3305 chr4 + 190214555 118304143 118304142 118304219 77 TGTATATATGCATACATGTG-------TATATGTATGTGTGTATGTGTGCATATATGTGTGTGTATATATACATATACACACAT chr4 - 94230402 70982598 70982597 70982681 23247722 23247721 23247805 84 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .:.......x:..x.....:-------.x:x...:..............:.:......x::.:x..:.:.::::.......... 20M7I57M 55/77 71.4% 84/94230402 0.0% 7/77 9.1% 47321545 NA +3151 chr4 + 190214555 118304145 118304144 118304249 105 TATATATGCATACATGTGTATATGTATGTGTGTATGTGTGCATATATGTGTGTGTATATATACATATACACACATATTTTTAAGGCATAATAACATTGAGATTCC chr4 - 94230402 68558025 68558024 68558127 25672276 25672275 25672378 103 TGCATATGCACACAGGCATGCAT--ATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATATATCCC .::.......:...x.::.::..--...:......:.........xx..:x:.x..:.:x:.....:...:x:x.x.:....x.x....xxx....xx.x..:.. 23M2D80M 67/103 65.0% 103/94230402 0.0% 2/103 1.9% 49746120 NA +3051 chr4 + 190214555 118305098 118305097 118305150 53 AATTTATATATATATATATATATACACACACACACACACATATATATATATAC chr4 - 94230402 64433212 64433211 64433264 29797139 29797138 29797191 53 AATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .....x.x.:.:.:.........x:.....:......:....::...:...:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 53871886 NA +5319 chr4 + 190214555 118308380 118308379 118308586 207 TTAAAAATTCAGATATGCTCATCAGTAACCATCCCAAATAATTAGGTTTTCCTTACTTGTAGCCAAGCTGACGACAGATCACAGCTGCATCCTTATCAGTCCATCCATCATCACAGATTGTTCCCCACTGGCCATTGATAAAAACCTCCACTCGTCCTTCTTTCTTATTTTCTCCATCCATCAGTCTGACAGGAAAACCTAAGTCAT chr4 - 94230402 37643415 37643414 37643601 56586802 56586801 56586988 187 TCAAAGAGTCAGATATCTG-----------ATATCAAATAAT---------CTTACTTAAATCCCAGCTGCCGGCAAGCCACCTGTGTATTCAGCTCTGTCCACCCATCATCGCAGATTGTGCCCCACTGCCCAGAATAATAGACCTCCAGGCGTCCCTCATGACTGCCTTTCCCACTTGTTAGCCTTAATGCACCATCTGTGTCAT .:...:.x........x:x-----------..x:........---------.......:x.x..x.....x..:..:::...xxx..:..:.xxx..x.....:........:........x........x...xx:xx.x.:.......xx.....:..x.xx:.:::..::...::::.:..:..x.xx.x.xx.:..:x..... 19M11D12M9D156M 123/187 65.8% 187/94230402 0.0% 20/187 10.7% 80664965 NA +11320 chr4 + 190214555 118308423 118308422 118308582 160 AGGTTTTCCTTACTTGTAGCCAAGCTGACGACAGATCACAGCTGCATCCTTATCAGTCCATCCATCATCACAGATTGTTCCCCACTGGCCATTGATAAAAACCTCCACTCGTCCTTCTTTCTTATTTTCTCCATCCATCAGTCTGACAGGAAAACCTAAG chr4 - 94230402 37639156 37639155 37639315 56591088 56591087 56591247 160 AAGATTTTCTTACTTGTAGCCAAGCTGTCGACAAACTACAGCTGCATCCTTATCAGACCATCCGTCATCACAAATCGTGCCCCACTGACCATTGAAAAAAATCTCTACGCGTCCTTCCTTCTTATTCTCACCATCCATCAGCCTGATGGGAGGACCTGAG .:.x...:...................x.....:.::...................x......:........:..:..x........:.......x.....:...:..x........:........:..x...........:....::...::....:.. 160M 134/160 83.8% 160/94230402 0.0% 0/160 0.0% 80669267 NA +5119 chr4 + 190214555 118308441 118308440 118308596 156 GCCAAGCTGACGACAGATCACAGCTGCATCCTTATCAGTCCATCCATCATCACAGATTGTTCCCCACTGGCCATTGATAAAAACCTCCACTCGTCCTTCTTTCTTATTTTCTCCATCCATCAGTCTGACAGG----AAAACCTAAGTCATGATTCAAAAG chr4 - 94230402 37648573 37648572 37648732 56581671 56581670 56581830 160 GCCAAGCTGCCGGCAGACAACTTCAGCATCTGCGTCATCCCACTGATCATCACAGATAGTCCCCCACTGGCCAGCATGGTAGACTTCTACTCTTCCTTCATAAGCCTTGTTCCCACCAGCCAGCCGGATCGGAGTAAAGACAGAGGCTATGATCAAACAG .........x..:....:x..xx.x.....:x::...x:...::x............x..:............x::xx:x.:..:..:....x......x.xxx:x..x.::...:.x::...:.x..:x..----..:..xx.:.::.....:x..x.. 132M4I24M 101/156 64.7% 160/94230402 0.0% 4/156 2.6% 80659868 NA +9858 chr4 + 190214555 118313195 118313194 118313428 234 CCTCACCCAGAGAGAGCCTGTGTCCCTCGCCGCCAGGGTAGCAGGCAATGCTAACATCTTCGCGGTGGCTGCAGTCATGCCTTCCCCACTGTCGCCTGGAACACTGAAGAAATCTGGTTTCCTTTCCTGAGCAGCTGACGTCATCCAACCATATGGGCCCTGTGCTTTCTTCAAAATGGTTGGCAGATGCTTGTTTACCATATCTGTG--ACAATTGAATAAACACTGTGTATAGA chr4 - 94230402 37642370 37642369 37642605 56587798 56587797 56588033 236 CCTTACCAAGTGAGAGTTTATGGCTGTTGTTATCTGGATGGCAAATGAGTCTGACATCCTCCTGATGGCTGCAGTCATGCTTTCCCCACTCTCTCCTTGAGCACTGCAGAAGGTTTGTTTCCTTCCCAGAGCAGCTGACATCATCCAACCAGATGGGACCAGAGTTTCCTTCTGAGGAGCTCTCAGGCACACTTTTTCCATACCTATGCAACAAATACATATACATTTTGGTCAGA ...:...x..x.....::.:..x.:x.:.::::.x..:.:...::::.xx..:.....:..x:.:...............:.........x..x...x..:.....x....:x:.x........:..x...........:...........x.....x..x.x.:..:....x:.:x:.:.xx...:::.x:x...x.....:..:..--....x.:x...x...:.x..xx:... 208M2I26M 161/234 68.8% 236/94230402 0.0% 2/234 0.9% 80670825 NA +4435 chr4 + 190214555 118316164 118316163 118316348 185 ATAATTAATGAACCTTACTTAAATCCCAATTGTCGACAAACCACGTATGTATTCAGCTCAGTCCAGCCATCATCACAGACAGTTCCCCACTGGCCTCTGTAATATACCTCCAAGCGACCCTCATGGCTGCCTTTCCCACCTGCAAGTCTGAT---------GACCCCATCTGTGAT-AAAGAGGAGACACAGAGA chr4 - 94230402 37648550 37648549 37648744 56581659 56581658 56581853 195 ATATGTAGTAAAACAAACCCAAGGCCAAGCTGCCGGCAGACAACTTCAGCATCTGCGTCATCCCACTGATCATCACAGATAGTCCCCCACTGGCCAGCATGGTAGACTTCTACTCTTCCTTCATAAGCCTTGTTCCCACCAGCCAGCCGGATCGGAGTAAAGACAGAGGCTATGATCAAACAGGGAACATAGGAA ...xx..:.:..x.xx..::..:x..x.::..:..:..:..x..x.xx.:..:::xx...x:...x:x...........:...:...........xx::.::..x..:..:.xx.xx..:....::x:x::x........x..x..:.x...---------...xxx:x..:....-...x...::...:..::. 152M9I15M1I18M 113/185 61.1% 195/94230402 0.0% 10/185 5.4% 80667614 NA +9535 chr4 + 190214555 118316167 118316166 118316365 199 ATTAATGAACCTTACTTAAATCCCAATTGTCGACAAACCACGTATGTATTCAGCTCAGTCCAGCCATCATCACAGACAGTTCCCCACTGGCCTCTGTAATATACCTCCAAGCGACCCTCATGGCTGCCTTTCCCACCTGCAAGTCTGATGACCCCATCTGTGATA-----AAG--AGGAGACACAGAGACTAAGCAAATCAACTTT chr4 - 94230402 37643436 37643435 37643638 56586765 56586764 56586967 203 ATCAAATAATCTTACTTAAATCCCAGCTGCCGGCAAGCCACCTGTGTATTCAGCTCTGTCCACCCATCATCGCAGATTGTGCCCCACTGCCCAGAATAATAGACCTCCAGGCGTCCCTCATGACTGCCTTTCCCACTTGTTAGCCTTAATGCACCATCTGTGTCATTAACAAGCAAGGAAAAACAAAAA-TAAG--AATCAGTTTT ..:..xx..:...............::..:..:...:....x.:............x.....x........:....:x..x........x..xxx:.....x.......:...x........:.............:..:x..:..x.xx:.x.........x:.-----...--....:.x...:.:.-....--.....::... 165M5I3M2I14M1D4M2D10M 153/196 78.1% 203/94230402 0.0% 10/196 5.1% 80672731 NA +11387 chr4 + 190214555 118318375 118318374 118318559 185 TACCTGTTAGAGGGGTACAGGACACTCCAGCATCTTCTTTATGGCCACAGTTATGCTCTCCCCAGGAGCTCTTTGGACACTGCTCAATTGAAAGCTCATTCCCAGTGCAGCGTACTTCATCCAACATAACTGGGCCAGACCCTTCCCCAAAATATGCCTGATGCCATGCTTTGGCAATGCCACTG chr4 - 94230402 37644212 37644211 37644396 56586007 56586006 56586191 185 TACCTGTGAGAGGTGTACAGGAAACACCAGCATCTTCTTTGTGGTCGCAGTTATGTTCTCTCCAAGAGCTTTTTGGACACTGTTCTATAGATAGCTCATTTCCTGTACACTGCACTTCATCCAGCAGCACAGGGCCTGAGCCTTCTCCAAAGTAAGCCTGGCTCCATGCCTTGGCAGCACCCCTG .......x.....x........x..x..............:...:.:........:....:...:.....:...........:..x..x..x........:..x..:..x:.:..........:..xx..x.....x..x.....:.....:..x.....::x......:......:::..x... 185M 147/185 79.5% 185/94230402 0.0% 0/185 0.0% 80674163 NA +4497 chr4 + 190214555 118318400 118318399 118318567 168 TCCAGCATCTTCTTTATGGCCACAGTTATGCTCTCCCCAGGAGCTCTTTGGACACTGCTCAATTGAAAGCTCATTCCCAGTGCAGCGTACTTCATCCAACATAACTGGGCCAGACCCTTCCCCAAAATATGCCTGATGCCATGCTTTGGCAATGCCACTG-AACAAATA chr4 - 94230402 37642419 37642418 37642586 56587817 56587816 56587984 168 TCTGACATCCTCCTGATGGCTGCAGTCATGCTTTCCCCACTCTCTCCTTGAGCACTGCAGAAGGTTTGTTTCCTTCCCAGAGCAGCTGACATCATCCAACCAGATGGGACCAGAGTTTCCTTCTGAGGAGCTCTCAGG-CACACTTTTTCCATACCTATGCAACAAATA ..:::....:..:.x.....::....:.....:......xxxx...:...::......xx..xxxxx:x:..x.......x.....xx..x.........xx:.:x..:.....x::.:.::.x:.:x.xx:..x.x.-..::....xx.x..:..xx..-........ 138M1D21M1I8M 106/167 63.5% 168/94230402 0.0% 2/167 1.2% 80675981 NA +3311 chr4 + 190214555 118322551 118322550 118322703 153 AAAAAAAAAAAAAAATTACAATAAATTAAACAAGGGAACAGTTTAACACTCACAGAAAATAAAATTCAAAAGTCATGTAAAAGCTGTAATTCCCACAATTTGGGGATGGAGGCTGAGT---TACTGAAATGTATTATTTG--TAATATGTTTATGAAA chr4 - 94230402 57119562 57119561 57119709 37110694 37110693 37110841 148 AAAAAAAAAAAAGAATTAAGACAAATTATACAGGGAAACAAATTAGTATGAAAAGAAGGTAAAA--CAAACTCTTCCCAGAAACACTAAC--------TTAAGGACTGCAGGAAAAGTACAGTCTGAAGTGTATTTTTTACTTAAAATATCAGTGAAA ............:.....x:.:......x...:..:....:x...::.:xx.x....::.....--....xx::x:x:.:..:.xx...:--------..x:..:x..x...xx:...---xx.....:......x...:--...x..:.:x:..... 64M2D24M8D20M3I19M2I16M 95/143 66.4% 148/94230402 0.0% 15/143 10.5% 61202989 NA +3361 chr4 + 190214555 118323481 118323480 118323562 82 CGGGAGGGAGAAAGAAGCAAAAGGAAAAAGGAAGAGAGGAGGAGGGAGGGAGGGAAGGAAGAAAGAAAAGAAAACTAAAAAG chr4 - 94230402 36691891 36691890 36691972 57538431 57538430 57538512 82 CAGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAG .:.....::.:.:.:.::...:.:.:.:.::.x:.x.......:........x....:.::...::x..x...x.x:..:.. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 81631590 NA +3268 chr4 + 190214555 118323804 118323803 118323859 56 TTTTTATATATATATATACACACACACACATGCACACACATTTCAGTTACAGTTTA chr4 - 94230402 66904842 66904841 66904897 27325506 27325505 27325561 56 TTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTA ....:......:..::..........:...::......:....x....xx:..x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 51418962 NA +3604 chr4 + 190214555 118326880 118326879 118326952 73 CAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGAAGACTTATCTTGGGCCACACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ....:x.:.....:...:..x........:......x..::x...x.:..x...:..x....::..:x...:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 108441023 81773532 +8614 chr4 + 190214555 118331684 118331683 118331849 166 GTTTAAGCAAAACAAGAGTAGTAAAAACAAACCTGAGGCCCAGCTGCCTGCAGATCACTTCTGCATCGGCATCATCCCATTGGTCATCACAAACGGTTCCCCACTGGCCAGCATGGTAGAGCTCCACCCGGCCTTCATGCACACTGCTGCCTCCAGCAAGGCGAAT chr4 - 94230402 37648537 37648536 37648701 56581702 56581701 56581866 165 GCTGGAGTAGAAAATATGTAGTAAAA-CAAACCCAAGGCCAAGCTGCCGGCAGACAACTTCAGCATCTGCGTCATCCCACTGATCATCACAGATAGTCCCCCACTGGCCAGCATGGTAGACTTCTACTCTTCCTTCATAAGCCTTGTTCCCACCAGCCAGCCGGAT .:.x:..:.:..x.x:x.........-......::.....x.......x.....:x.....x.....x..:........:..:........:.::..:......................x:..:..:.xx.......:x:.x:..:.x..x.....x..x..:.. 26M1D139M 124/165 75.2% 165/94230402 0.0% 1/165 0.6% 80683147 NA +12891 chr4 + 190214555 118335440 118335439 118335666 227 AGTAAAACAACAGAACTTTTTTCT-TTTTTTTACCATGGGAAAAGCTACACGTGACAGCAGCTGCCATCTTCTGAGGACACACCCCACCCTGCCAGATGTCTTTTTCACAAAGCAGTATATTTTCTTCATCTCCTCGGCAACGGACATTGCTCCAATAAATGGGAATAAGGCCCAGTCCAGAAAACGGGGTTTGTTTTGCTATTCCTTTTCCTCTGGAAGTACAATGA chr4 - 94230402 37650499 37650498 37650726 56579677 56579676 56579904 228 AGCCAAACCATACATTTTGTTTTTGTTTTTTTACCTAGGGAAGAGCTACATGTAACAGCAGCTGCCGTGTTTTGAGGACATATTCCATCTTGCCAGATGTCTTTTTCACATAACAATATATTTTCTTCATCGCCACGACAACGCACTTCACTCCAGTAAACAGGAATAAGGCCCAGTTCGGAAAATGGTATGTGTTTTGATGTACCTTTTTCACTGTAAGAAAAATAA ..:x....x.:.x.x:..x...:.-..........xx.....:.......:..:............:.x..:........:.::...:.:....................x.:..:...............x..x..:.....x..x.::.....:....::...............:.:.....:..x:.x.......x.:.x......:.x...x...x.x...:. 24M1I203M 177/227 78.0% 228/94230402 0.0% 1/227 0.4% 80684941 NA +8024 chr4 + 190214555 118338170 118338169 118338319 150 ACTCACCCCAGCTGCAGCTGGTGACAAATGACTGATGCATCAGAATCATCCCAGTGGCTGCTACAGACAGTGCCCCAAACTCCACTTGCATATACTTCCACTGTGCCTTCAAACTCATTTTTGCCGCCACGAAGTCGTACTGATCCTAAA chr4 - 94230402 37652929 37652928 37653078 56577325 56577324 56577474 150 ACTTACCCAAGTGCAAGCTGTCGACATATGACCGTTGCATCATTATTGTCCCAGTGGCTGCCACAGATTGTTCCCCAGACTCCATTCAAATAAACCTCCACTGTACCTTCAAATTCATTCTTGCCACCTTGGAGTCTCACTGACACTTAA ...:....x..:xxx.....x:....x.....:.x.......xx..::.............:.....:x..x.....:......:.::x...x..:........:........:.....:.....:..x:.:....x:.....:x..x.. 150M 112/150 74.7% 150/94230402 0.0% 0/150 0.0% 80685241 NA +4429 chr4 + 190214555 118339803 118339802 118339878 76 CTTCTACAGAGGTCCACGTAATATTATGCACATCACAAATGCCAGCAGTTTATTTTAGTCAAAGAATTCATTTGTT chr4 - 94230402 37653552 37653551 37653627 56576776 56576775 56576851 76 CTTTTGCTCTGACCCATGTAATATTATGCTTGTCATGGATGTCAGTAGTTTATTTTAGCCAAAGAATGCATTTGTT ...:.:.xxx.::...:............x::...:::...:...:............:........x........ 76M 58/76 76.3% 76/94230402 0.0% 0/76 0.0% 80686251 NA +7355 chr4 + 190214555 118352567 118352566 118352866 300 GCTGCTGGGTGGGAAGGTAATAGGGG----TAGTGCGGACCCGCAGGGGGCGAATGGCGG----TGGCTGTGGTGGAGGGAATCATTGAGGACAGAATCAAAGCCGACCACTTCGGGGAGCGCCCCTAACATCAGGGCTAGCACGAAGCGGGCGAGCGTCATGGTGCCAGCGCTGCGGGGTCTGGTCCATGCTCCCCAGCTTCTCGGGCTTGGAGCGGAGAAGAGGAGGGGGCGGGGGCGGGGCTGCCGCGTCCCTCGAATCCCCCAGCCCCCTCCCGCCCCCGCACGCGGACCGCCCTCGCCTCCCC chr4 - 94230402 37664806 37664805 37665096 56565307 56565306 56565597 291 GCTCCCCGCTGGGCAGCCGGCGGGGGGTTGTGGCGGAGGCGGGCCGGGGGGGTACGGCGGGGCACGATTAAGGGGGAGGG---CGGCGGAGACCTCCCCCGGCCCGCGAGCTCCGGGCAGCGTCCCGATCACCAGCGCCACCACGAAGCCGGCGAATGTCATGGTGCCAGTCCCGCCGGCTCGCGTCCAT-CTCCCCTTCTCATCGCGCCCGG------GATGCGAAGGGG--GAAGGCGGGGCCGCGGCGTCCCGCTAATCCCCC--CTGCCGCGCACCCCC---CGCCACCTCCTCTCGGCTCCCC ...x.:x.x....x..x:::::....----.:.:.x:.:.xx..x.....x.x.:.....----:.::.:x..x......---.:x:.::...xxxx:.x::x...xxx:..:....x....:...x.x..:...x..:.x........x.....::.............:x.:..x..x..xx......-......xx..:x...x..::..------..x.x.:.....--.::........:..x.......x.x........--.:x..x.x.:.....---...x:x.:x.:....x...... 26M4I30M4I16M3D107M1D22M6D12M2D33M2D15M3D22M 190/283 67.1% 291/94230402 0.0% 25/283 8.8% 80687761 NA +3285 chr4 + 190214555 118366981 118366980 118367035 55 TTTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATA-CACAGAAGTA chr4 - 94230402 69437734 69437733 69437789 24792614 24792613 24792669 56 TTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTA ...::.........x........:x...................x-:...x..... 45M1I10M 47/55 85.5% 56/94230402 0.0% 1/55 1.8% 48929247 NA +3134 chr4 + 190214555 118367008 118367007 118367061 54 TATATATATATATATATACACAGAAGTATTAATTTAAGGAGAAAGTGAGAAATA chr4 - 94230402 72042993 72042992 72043046 22187357 22187356 22187410 54 TACATATATATATATATACACACATTTACTTATTCAAAAGAAAAGTGAGAAACA ..:...................x.xx..:.x...:..::::...........:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 46324015 NA +3271 chr4 + 190214555 118376239 118376238 118376296 58 CCTTATCTTA---AAAAACAAAAACAGCAACAACAACAACAACAACAAAAAAACAAAACAA chr4 - 94230402 54393151 54393150 54393211 39837192 39837191 39837252 61 CCCTATCTTGCACAAAAACAAACAAAGCAACAACAACTACCAGAACAAAAAAATAAATCAA ..:......:---.........x.x............x..x.x..........:...x... 10M3I48M 49/58 84.5% 61/94230402 0.0% 3/58 5.2% 63983088 NA +3116 chr4 + 190214555 118380808 118380807 118380881 74 CTGCAGCCTCAGCCTCTTGGGCTCAAACAATCCTCCCACGTCAGCCTCTCAAGTAGCTGGGACCACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x.:x..::....:....:::x.:.x.xx:xx.......:............:..:...x.::... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 100183682 90030873 +3028 chr4 + 190214555 118380889 118380888 118380934 46 CATTCAGCTATTTCTTTTGTGTGTGTGTGTGTGTGTGTGTGTACAC chr4 - 94230402 50055271 50055270 50055316 44175087 44175086 44175132 46 CATCCAGTTACTTTTTTTCTGTGTATGTGTGTGTGAGTGTACACAC ...:...:..:..:....x.....:..........x....::.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 68325618 NA +3981 chr4 + 190214555 118384141 118384140 118384259 119 CTTCCTTCCTTCCTTCCTT-----------TTTCTTTTCTCTTTTCTTTCTCCTTCCTTCCCTCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTCTCTCTTTCTTTCTCTCTCTGTCTCTTTCTTTCTGT chr4 - 94230402 43081900 43081899 43082026 51148377 51148376 51148503 127 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATT---TCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGT ..:.........x.x.:.:-----------::..:...::.....:......::x..:...x.x..:.x..---..xx.:..xxx:....x.:...:...:...:.......x.:x..::.......... 19M11I41M3D56M 80/116 69.0% 127/94230402 0.0% 14/116 12.1% 75302241 NA +3500 chr4 + 190214555 118384145 118384144 118384273 129 CTTCCTTCCTTCCTTTTTC----TTTTCTCTTTTCTTTCTCCTTCCTTCCCTCTTTCCTTCCTTCCTTCCTTCCT-TTCTTTCTCTCTCTTTCTTTCTCTCTCTGTCTCTTTCTTTCTGTCTCTCTCTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTT-TCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTC--------TCTCTCTGTAGCTTCTTCTTTCT ..:.........x.x:...----.x:.x..::.:....-.....::..::....:x..:...x.x:.:.x..:.x-....xxx::...x..............--------...:.....xx..:::....... 19M4I15M1D36M1I27M8D23M 84/120 70.0% 125/94230402 0.0% 14/120 11.7% 75302245 NA +3111 chr4 + 190214555 118384149 118384148 118384194 46 CTTCCTTCCTTTTTCTTTTCTCTTTTCTTTCTCCTTCCTTCCCTCT chr4 - 94230402 67430016 67430015 67430061 26800342 26800341 26800387 46 CTCGCTTCCTTTTTTTTTTTTTTTTCCCCTCTCCTTCCTTCTCTCT ..:x..........:....:.:...:.::............:.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 50954133 NA +3559 chr4 + 190214555 118384326 118384325 118384409 84 ATCGTGCTCACTGTAACCTTCAACTCCTGGGCTCAATTGATCATCTAGTCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197118 18197117 18197199 76033204 76033203 76033285 82 ATCATGTTC--TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...:..:..--.::.:..:xx.:..:.....:....x..x.:xx.x:.x........::.........:.:......x...... 9M2D73M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 100187208 90027347 +3127 chr4 + 190214555 118399313 118399312 118399367 55 TGTGTTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTTTTGTAGAAATA chr4 - 94230402 35056085 35056084 35056139 59174264 59174263 59174318 55 TGGGATTTGTTTGTTTGTTTCTTTGTTTTGTTTCATTTTTTTTTTCTGAGAAATA ..x.x...x.......x..x:............::..........:xx....... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 83343228 NA +3108 chr4 + 190214555 118451927 118451926 118451978 52 TGTCAAGGAATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATA chr4 - 94230402 89821270 89821269 89821321 4409082 4409081 4409133 52 TGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..::::....xx.........x.x.......:...............:..:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 28630657 NA +3156 chr4 + 190214555 118451929 118451928 118451979 51 TCAAGGAATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 9151843 9151842 9151893 85078510 85078509 85078560 51 TCAATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ....x.xx...xx.......................x....x.:....... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 109300086 80914469 +3004 chr4 + 190214555 118451935 118451934 118451976 42 AATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821280 89821279 89821321 4409082 4409081 4409123 42 AATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ...x.......x.x.......................:..:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 28630655 NA +3367 chr4 + 190214555 118451936 118451935 118451996 61 ATTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 19559287 19559286 19559347 74671056 74671055 74671116 61 ATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt ....x.x.x.............:................:.xx..x.....x.x.x..:.. 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 98892649 91321906 +3223 chr4 + 190214555 118451937 118451936 118452003 67 TTTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 19559290 19559289 19559355 74671048 74671047 74671113 66 TTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATATTCTtgtggtggg ...x.x..............................:.xx..-......x.x.x..:..x.xx..:. 42M1D24M 53/66 80.3% 66/94230402 0.0% 1/66 1.5% 98892647 91321908 +3132 chr4 + 190214555 118451941 118451940 118452001 61 TGTGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882833 78347570 78347569 78347630 61 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTG ..x......................:..xx.:.:.xx:.x.....:..x...x....x... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 102569168 87645387 +3047 chr4 + 190214555 118451943 118451942 118451999 57 TGTGTGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882829 78347574 78347573 78347630 57 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTT ..x............:.........:..xx.:.:.xx:.......:..x...x.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 102569170 87645385 +3313 chr4 + 190214555 118451949 118451948 118452001 53 TGTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735348 92735347 92735400 1495003 1495002 1495055 53 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG ..::.:.x.....:...:..:.:...............:.x.........:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 25716601 NA +3229 chr4 + 190214555 118451957 118451956 118452007 51 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 70265141 70265140 70265191 23965212 23965211 23965262 51 TAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG ..x......x...........:..x.:............::.:...x.... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 48186816 NA +3189 chr4 + 190214555 118452479 118452478 118452537 59 AAAAAAAAAAAAAAAAAGAAAGAAAGAA-ACACACACACACACAAATTCCTTGACATTTT chr4 - 94230402 52796033 52796032 52796092 41434311 41434310 41434370 60 AAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGACATTCT ...x..x..x.........:.....:x.-...:..............x..:x......:. 28M1I31M 48/59 81.4% 60/94230402 0.0% 1/59 1.7% 65656446 NA +3057 chr4 + 190214555 118455992 118455991 118456035 44 TTATCTTTTTTTGTTTTGTTTTGTTTTTTGAGACAGAGTCTTAA chr4 - 94230402 39249785 39249784 39249828 54980575 54980574 54980618 44 TTATTTTTTTTTCATTTGTTCTGTATTTTGAGACAGAGTTTTAA ....:.......xx......:...x..............:.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 79206207 NA +3790 chr4 + 190214555 118531426 118531425 118531568 143 ATATCTCCTTT-----GTTTTTTGTTGTTGTTGTTTTGTTGGATTTTTTTTTTTT---TTTTGAGACAGAGTC----TCACATTCT-GTTGCCCAGGCTGGAGTATAGTGGCATGATCTCGGCTCACTGCAACCTCCACCTCCCAAGTTCAAAGGA chr4 - 94230402 56166858 56166857 56167012 38063391 38063390 38063545 155 ACATCTACTTTAACATGTTTTTTGTTGTTGTTGTTTTTCAGGGTTTTTTTTTTTTTAATCTGGAGATAATGTTACCACCTCATTATAGTTTATCAGG-TGATACAAAGTAACTTAAAATGGCATTACTACAACCTCCCTCCTCCAAATAAAGAGAA .:....x....-----.....................x:x..:............---.:.x....:.:x..:----:.x....x.-...xx:....-..:x::.x...::.x.:.xx.x.xx.:...:........x:.::....:.xx.:..:. 11M5I39M3I15M4I9M1I10M1D58M 99/142 69.7% 155/94230402 0.0% 14/142 9.9% 62364568 NA +3007 chr4 + 190214555 118532907 118532906 118532986 80 TAAATGAAGTGAAGTTAATTTGCTAATATCTTGGGGTTTTTTTTTTTTTCTTCCCATGCCTTGTAAACCTTAAACCACTA chr4 - 94230402 75648874 75648873 75648953 18581450 18581449 18581529 80 TGAATATATTTGACTTACTTTGATAATATTGTGGGGTTTTTTTCTGTTTTTATCAGTGTCTTACATCCCGTAAATCTCTA .:...:x.x.x:.x...x....x......:x............:.x...:.x:.x:..:...::.xx..x....:.x... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 42884033 NA +3535 chr4 + 190214555 118576475 118576474 118576594 120 TCTCACCTGTTGCCAGGCTGGAGTGCAGT-----GGCACAAA----CTTGGC-TCA----CTGCAACCTCCACCCCCCAGGTTCAAGCGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197067 18197066 18197199 76033204 76033203 76033336 133 TCTCTGCAGTCACCATGCTGG-GAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....xx.x..::...x.....-.x....x-----......x.----......-...----..:..:..:xx.x.::.::........:.x...x.xx.x.....:..::::.........:......x...... 21M1D7M5I8M4I6M1I3M4I74M 87/119 73.1% 133/94230402 0.0% 15/119 12.6% 100379408 89835147 +3098 chr4 + 190214555 118591557 118591556 118591619 63 GGTTCACAGGCTGCTGGTAAGATTTGTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 72884633 72884632 72884695 21345708 21345707 21345770 63 GATTCAGTGGGTACCAGACAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTG .:....xx..x.:.::.xx..x:.....:....:::...:..........:.........:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 45706924 NA +3723 chr4 + 190214555 118601892 118601891 118602031 140 CTTCCCTTCCCCTCCCTCCCTCTCTCTC-----TCCCTCCCTCCCTCCTTCCCTCCCTTCCTCCTTCCCTCTT----------------TCTCTCTTTCCCTTC-----CTTCCTTTCCTTCTTTTCCTTCCTTCCTTTCCTTCCCTCCTTCCCTTTTTCCCTCCT chr4 - 94230402 200524 200523 200689 94029714 94029713 94029879 166 CTGCCCCACGTGTCCCTCCTTCTCCCCCGGCCGCCCCTCACGACGTCGTGCCCCAGCTCCAAGCTTTTCTCTTCCAGGCACTGAGCTCATCCCTCTTTCATTACACGGTTTGTTTTTCCTTTTTTTCCCTTCTTCTTTATTTCCCCCCCCCCCTCTTTTCACTCCT ..x...:x.x:x.......:....:.:.-----:.....x.xx.x..x.x...:xx..:.xxx...::.....----------------..:.......x:.x.-----:.x::.......:......:.:....:..x::.:...:..::..::.....x..... 28M5I40M16I15M5I57M 93/140 66.4% 166/94230402 0.0% 26/140 18.6% 118401368 71813187 +3341 chr4 + 190214555 118610839 118610838 118610901 63 AGCCTCAACCTCCAGGGCTCAAGTGATTCTCCTGCTGCAGCCTCTCAAGTAGCTGGAATTACA chr4 - 94230402 18197130 18197129 18197192 76033211 76033210 76033273 63 AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ....:x..x..:.x...:.......x...x.xx.x:x......:..............:.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 100413709 89800846 +3249 chr4 + 190214555 118623993 118623992 118624088 96 TTATGTTGTCCAGGCTGATCTCAAACTCCTGGGCTAAATCGATTGTCTCACCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGCATACCACCATGT chr4 - 94230402 18197119 18197118 18197207 76033196 76033195 76033284 89 TCATGTTCTACAG-----CCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTGT .:.....x.x...-----:.:x..:..:.....:.x..x:.x..xx.xx:x........:............:......x.:..--.....::... 13M5D66M2D10M 64/89 71.9% 89/94230402 0.0% 7/89 7.9% 100426874 89787681 +3616 chr4 + 190214555 118638536 118638535 118638702 167 AGAGTCAGCACTCCCAGTCCCACCTGGTGGAT------GCTCATGAG----------------CAACAGCTGCCAACTTGGCAGGTTGTTTTCTCTGGTTGGAGGCCACTGAGTGACTGGCAGGTTGCTGGGCCTCGTGTGGCTGCAGGGAGGGGTCAGGAAGGGGATGGAGTACCAGGGGAACACGGC chr4 - 94230402 90026650 90026649 90026825 4203578 4203577 4203753 176 AGAGGTGGCACCACCAGACTCACCTCGTAGGCCTGAGGGCTCGTCAGGAAGCGGGCTATGGGCCCACAGCAGCC----CGGCAG--TGTGGTGGTGAGGGGAGGGCCGCTGTGTGTC-AGCAGA------GGCTTCAGGTAGCTGCAGGGAGAGGTAAGGAAGAACACGGAACACAAGAGGAGCATGGC ....x::....:x....x.:.....x..:.::------....:.x..----------------.x.....x...----:.....--...xx.xx:x:.xx.::....:...x...x.-:....:------...:..:x..:...........:...x......::x.:...::..x..:...:..:... 32M6I9M16I11M4D6M2D31M1D6M6D59M 106/154 68.8% 176/94230402 0.0% 35/154 22.7% 28611886 NA +3339 chr4 + 190214555 118667797 118667796 118667863 67 CTGCAACCTCTGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGAATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:.::........x.x...x.xx.x........:..............:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 100470671 89743884 +3325 chr4 + 190214555 118670733 118670732 118670807 75 CTCTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGG chr4 - 94230402 83671951 83671950 83672025 10558378 10558377 10558452 75 CTTTGTGTCAAGACAAGAAAAAAATAAGGAAAAGGAAAAAAAAACAATGGAAAGCATGAAATGCAAAAGAGAAGG ..:...x:x..:.x..:.......x..::.........:.....x..x:....:x.x....x:x....:.:.... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 34998782 NA +3186 chr4 + 190214555 118670739 118670738 118670805 67 CCAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAA chr4 - 94230402 24662128 24662127 24662194 69568209 69568208 69568275 67 CCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAA ....................:.xx:...x:.:.....:.:.x...::.:.::x...:..::...x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 94008611 NA +3368 chr4 + 190214555 118670744 118670743 118670857 114 AAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAAAAATAAATAAGTAAGTAAATA--AATAAATAAATAAATAAATAAATAAAT chr4 - 94230402 21758989 21758988 21759104 72471299 72471298 72471414 116 AAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAACGTTTCAGTGAAAAGTAATAGGGTTATGACTATTTAAATAAAT ..:........:....:........:::.:.x...x......xxx....:..:.xxx:x..::......xx..::xx.x...:..x.--....::xxx..:.x..xx......... 87M2I27M 75/114 65.8% 116/94230402 0.0% 2/114 1.8% 96911755 93302800 +3050 chr4 + 190214555 118670744 118670743 118670810 67 AAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAAAAGGAAA chr4 - 94230402 20475871 20475870 20475937 73754466 73754465 73754532 67 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAA ...................:......:x..::x.::....x.x.x..:..x.x....::..x:x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 98194873 92019682 +3027 chr4 + 190214555 118670802 118670801 118670862 61 AAAAGGAAAAATAAATAAGTAAGTAAATAAATAAATAAATAAATAAATAAATAAATAAAAG chr4 - 94230402 38421698 38421697 38421758 55808645 55808644 55808705 61 AAGGGGCAAAAGGAAAAGGGAAGTAAGTAAATAAATAAATAGACAAATTGAAGAAAAAAAG ..::..x....x:..x.:.x......:..............:.:....x:.x:..x..... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 80249104 NA +3010 chr4 + 190214555 118677374 118677373 118677429 56 ATTACAAATTACAAATAAATTACCTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 41992572 41992571 41992627 52237776 52237775 52237831 56 ATCATACGTTTCAACTTAGTTAGCCTTTATTCTTTCCTTTTTCTTTTTTTTTTTTT ..:.:.x:..x...x.x.:...x.:...x......:......:............. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 76684802 NA +3283 chr4 + 190214555 118678292 118678291 118678355 64 AGAGCAAGAGATTCTTTTTGAGGAAAAAAAAAAAGAAGAAAGAAAAGGAAAGAAAAAAAGAAAA chr4 - 94230402 80800101 80800100 80800164 13430239 13430238 13430302 64 AGGAAAAGAGATTGCTCTAGAGGGACAGAAGACAAAAAAGAGAAGAGGGAAGAAAAAAAAAAAA ..::x........x:.:.x....:.x.:..:.x.:..:.:....:...:..........:.... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 37878191 NA +4018 chr4 + 190214555 118678303 118678302 118678440 138 TTCTTTTTGAGGAAAAAAAAAAAGAAGAAAGAAAAGGAAAGAAAAAAAGAAAAAGAAAGAG-AGAGACACAG---AAAGAAAGAAATAGAGAGAAAGAGAGAGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAGAGAGA chr4 - 94230402 30533156 30533155 30533285 63697118 63697117 63697247 130 TTCTTCTT-----AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGA-------AGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA .....:..-----...x.....:.............::::..:.:.....xx:x....:..-.:..:.x..:---.....xx........-------...:x...:..:...:..::...x.xx.:...:..:..::.x.:. 8M5D48M1I10M3I15M7D45M 89/126 70.6% 130/94230402 0.0% 16/126 12.7% 88145147 NA +3075 chr4 + 190214555 118678313 118678312 118678368 56 GGAAAAAAAAAAAGAAGAAAGAAAAGGAAAGAAAAAAAGAAAAAGAAAGAGAGAGA chr4 - 94230402 69673927 69673926 69673982 24556421 24556420 24556476 56 GGAAAAAAAAATGGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGA ...........x:...:x:.:.xx.....xx.......:.......:..:...... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 49004386 NA +3288 chr4 + 190214555 118678366 118678365 118678491 126 AGACACAGAAAGAAAGAAATAGAGAGAAAGAGAGAGAGAAAGAAAGGAAGAAAGAAAGAAAAAGAAAGAGAGAGAAAGAGGAAAGGAAAGAAGGAAAGAAAGAAGAGGAGGAGGAGGAAGAAGAAA chr4 - 94230402 61334676 61334675 61334801 32895602 32895601 32895727 126 AAATGTATAAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA .:.:::.x..:....x.x:.::.xx..........:.x......x..x...:.:.::x:.::...x:xx..x....xx..x.:.::.x.x.::...x..x..:.:.::.x::.:..:....:..:. 126M 73/126 57.9% 126/94230402 0.0% 0/126 0.0% 57343690 NA +3302 chr4 + 190214555 118682573 118682572 118682628 56 TACGATTTTTTTTTTTTTTTTTTTTTTTGAGATGCAGTTTCGCTCC--TGCTGCCCAG chr4 - 94230402 5847645 5847644 5847702 88382701 88382700 88382758 58 TATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGCTGCTCAG ..:.x..............:.::.........x..x..:.:.....--......:... 46M2I10M 46/56 82.1% 58/94230402 0.0% 2/56 3.6% 112834928 77379627 +5085 chr4 + 190214555 118685531 118685530 118685602 72 GAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGGT chr4 - 94230402 37678857 37678856 37678928 56551475 56551474 56551546 72 GGAGATGAACAGCCGCCTGCAGGAGATCCGGGAGAGGCAGAAGCTGCGGCGGCAGCTCTTGGCTCAGCAGGT .:.x...:.:......:.................x........:.:.....:......:.x..x........ 72M 60/72 83.3% 72/94230402 0.0% 0/72 0.0% 81006674 NA +7081 chr4 + 190214555 118687914 118687913 118688013 100 TTTTCTCAGTTGGGAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGAAATTGCTGAAACAAGAGAAACTTGCAGGT chr4 - 94230402 37679279 37679278 37679378 56551025 56551024 56551124 100 TCTTTTCAGTTAGGAGCTGAAAACGCAGACAGTATTGGTGCTGTGTTGAACAGTAAAGATGACCAGCGGGAGATTGCTGAAACAAGAGAAACCTGTAGGT .:..:......:..........::..x.....:........:.....:..:..:........x...x.:..:....................:..:.... 100M 83/100 83.0% 100/94230402 0.0% 0/100 0.0% 81008635 NA +7091 chr4 + 190214555 118689363 118689362 118689468 106 TTTTCAGGGCTTCCTATGATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGGATGAAGGAGAGACAGATGAAGACAAAATGGAAGAATATAAGGCAAGTAGAGA chr4 - 94230402 37680066 37680065 37680171 56550232 56550231 56550337 106 TTTATAGGGCTTCTTATGATACTTCTGCACCAAATGCAAAACGCAAGTATCCAGATGAGGGAGAAGCTGATGAAGAAGAGATTGAAGAATATAAGGTAAGAAGAAA ...x:........:........:.....x..............:.......::.....:.....::.x........x:.:..x.............:...x...:. 106M 87/106 82.1% 106/94230402 0.0% 0/106 0.0% 81009297 NA +10798 chr4 + 190214555 118691525 118691524 118692084 560 TTTCAAGGATGAACTAGAAATGCAACAGGATGAAGAAAATTTGCCATATGAAGAAGAGATTTACAAAGATTCTAGTACTTTTCTTAAGGTAA-----------AATA-AATAATTTTCAAATTTTGTAACTCTTCATATTTAAGTTCTATACCTGAAA------AGATTTTAAATACCTGTTTGTCTTCAAGATGTTTTTTAATTATTGAGGGATCATTGTTATAAAATAAAGATTATTTAAAATTACTCATGAAATAGTCTTCTGATATTTGGCTATTTAGTGTGAGGTAACAGTATATTAATATCAGTAGCTACTGAAAAGTAATAATTTTAGTT---GTATTTTCAAATATTACTA--------ATTTTTAAATCTATCAATTGATTGCATTTTATATCACCTTGTAATAGAAAACAGTACAGAGATAATTTATCTGCCATTACAATGCATGTTACAAATTTAATTTTGTTTTTTAATTTAGGGAACACAGAGCTTAAATCCCCATAATGATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGATGTAGGTATGTCAGGTTTGTT chr4 - 94230402 37688008 37688007 37688541 56541862 56541861 56542395 534 TTCCCAGGATGAAGTAGAGCTGCAGCAAGATGAAGAGAATCTACCCTATGAAGAAGAGATTTACAAAGATTCCAGTACCTTCCTTAAGGTGAGCAGTTCTGTGATTAGAAGAATAGTTAAAG---GCATATTGTTGTATTAAA---TTATTCATGCAATCGATTGTATTTGAAGCACA-----GCCTTAAAGGC---------TGAATGAAGGA--GTTGACTGAAGTTCACAGGTATGAAAGTTTCCTCGTGAAACACACAACTGTAAC----------AGTGAGCAGTAGCAATGTG---------GAGTCTAATTGGAGATGATAAACAGAATGACAGCGTTGACTAGTTTAACTAGTAGAAGCATGTTGAAAAAAATCAGCTATTTTCTCCTTTTACAGACT---AAGAGATTGCAGCAT-GTGTTCAGTTCTCTCTCCTTACAGC-----TCACTGAACTCCTTCTGTTCTTTA-----GGGTACTCAGAGCTTAAATCCACACAATGATTACTGCCAGCATTTTGTGGATACAGGACATAGACCCCAGAACTTCATCAGGGATGTTGGTATGTCATAGTTATT ..:.x........x....:x....:..:........:...:.:..x..........................:.....:..:........:.-----------.x..-..x...xx.:...x---.:.xx.:x.::....x..---:...x.x..x..------:x....x..::..x-----.:...x...::---------.x.x...:...--:...x:xx..:x.x.x::x...xx..:x..x...:.....:.xx.xx...xx.:----------....x.x:...:..:.:.:---------.x:x...x.x::.::.:....x:xx.:.x---.::..xx.x.:.x.x....--------..x..x...xxx....::.:x..x.x::..x..:x:x..---..x...xx:...:.:-.x.x.x.x..x...x:.x.....::-----.:..x:.x:.xx..:....:....-----...x..x..............x..:..............:........:..:..x...........:.....:..............x.........x:x..:.. 92M11I4M1I14M3D18M3D12M6I14M5D11M9D11M2D54M10D19M9D29M3I19M8I39M3D15M1D25M5D24M5D105M 344/505 68.1% 534/94230402 0.0% 84/505 16.6% 81003517 NA +9023 chr4 + 190214555 118694422 118694421 118694653 232 TTTTTTCTGCTCAGGTTTAGCTGACAGATTTGAAGAATATCCTAAACTGAGGGAGCTCATCAGGCTAAAGGATGAGTTAATAGCTAAATCTAACACTCCTCCCATGTAAGTGTTTTTAT-TCAATTACTGTTTATTCCCAACTCAGGCTTAAAG-TATCAGTTTGTTTATCCTATAACCTTTTTTCTTCTTCCTAAATTCAGCACTTATGTTAACATGCTTTATTACTCTGTTT chr4 - 94230402 37690482 37690481 37690703 56539700 56539699 56539921 222 TTTCTTCTTCTCAGGCTTAGCAGATAGGTTTGAAGAATATCCAAAACTTAGAGAGCTCATCAGATTGAAGGATGAGCTGATATCTAAATCTAACACTCCTCCCATGTAAGTGTTTGTGTGGAAAACACCCTTTCTTCTCCAGACTGGTTTGAAGTTAGCTGTCTGCTT----TGCAAATCTCTATCTTTAGCATCTGTTCATAATTT------ACATTTTCTATT--TCTGTTT ...:....x......:.....x..:..:..............x.....x..:...........::.:.........:.:...x................................x.:.-xx..x:..:x...x...:.x.xx.x..:..:...-..x.x..:..:..----.::..x::.:.x....:xx.x.xx:....xx.:..------....x:.:....--....... 119M1I34M1I13M4D35M6D12M2D7M 165/220 75.0% 222/94230402 0.0% 14/220 6.4% 81003940 NA +3576 chr4 + 190214555 118694877 118694876 118694959 83 CTGCAGCCTCCGCCCCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTTCTGAAGAGCTAGGATTACAGGCACGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:xx:x.::.............x...x..x.x.........:::.:x....:.:.:....--.::.......::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 100497751 89716804 +11255 chr4 + 190214555 118697084 118697083 118697326 243 TAAGACATTTCTTTCATTACCATCTGTTAAGGTACTTGAAAATCTT------------ATTTAAAAAGCATTTTTTTAAAAACCTCA-----TTTTTAATGCTTTAATCAAATAGGTACTTACAAGCCGATATAGAAGCCTTTGACATCAGAGAACTAACACCCAAATTTGATGTGATTCTTCTGGAACCCCCTTTAGAAGAATATTACAGAGAAACTGGCATCACTGCTAATGAAAAATGCTGGACTTGGGATGATGTA chr4 - 94230402 37692031 37692030 37692290 56538113 56538112 56538372 260 TAAGAGATCCCCCTCCTTCTCCCTTACTTTGCTACACAGAAATGTTGTGTGAAGTATAATTTTCAGAGCATTGTTATAACTTCTTCAAGCAGTTTGTCAACTTTTGTTTAAATAGGTACTTGCAAGCAGACTTGGAAGCTTTTGATATTAGGGAACTGAAATCCAAATTTGATGTGATTCTCCTGGAGCCACCACTGGAAGAATACTATAGAGAGACTGGCATTACTGCAAATGAGAAATGCTGGACCTGGGATGATGTA .....x..::.::..x..x:.x::.::.xx.x...x:::....x..------------....xx.:......x..x...xxx.:...-----...x.x.xx:...:x.:............:.....x..:x.:.....:.....:..:..:.....:.x.:...................:.....:..x..x:.:........:..:.....:........:.....x.....:...........:............ 46M12I29M5I168M 180/243 74.1% 260/94230402 0.0% 17/243 7.0% 81005053 NA +7353 chr4 + 190214555 118700534 118700533 118700705 172 TTTTGATTTCTTACAGATTATGAAGTTAGAAATTGATGAGATTGCAGCACCTCGATCATTTATTTTTCTCTGGTGTGGTTCTGGGGAGGGGTTGGACCTTGGAAGAGTGGTAAGATGGTGCTTTTATAAAGTGGATTTTTAAATTAATAAGAAAAAAATGTAACAGTATGTT chr4 - 94230402 37694351 37694350 37694510 56535893 56535892 56536052 160 ttttttttttttttAGATCATGAAACTAGAAATTGAAGAAATTGCTGCCCCAAGGTCATTTGTTTTCCTATGGTGTGGTTCAGGAGAGGGTCTGGATCTTGGCCGAGTGGTAAGACAGTGTTTTAA------------TTCAATTTATCAGGGACATATTTAAGAGTTTATT ....xx...:..x:....:.....::..........x..:.....x..x..xx.:......:....:..x...........x..:.....x:....:.....xx...........::...:...x.------------..x....x..x..::.x.x..x...x...x.:.. 126M12D34M 120/160 75.0% 160/94230402 0.0% 12/160 7.5% 81006183 NA +9359 chr4 + 190214555 118703921 118703920 118704078 158 TCTTTTGTTTCTAGTGTTTACGAAAATGGGGTTACAGAAGATGTGAAGATATTTGTTGGATTAAAACCAATAAAAACAATCCTGGGAAGACTAAGACTTTAGATCCAAAGGCTGTCTTTCAGAGAACAAAGGTATTGCCTTTACTGATTTGTTTTTTT chr4 - 94230402 37695754 37695753 37695911 56534492 56534491 56534649 158 TCTGTTACGTTTAGTGTCTACGCAAATGGGGTTACAGAAGGTGTGAAGATATTTGTTGGATTAAAACGAATAAGAATAATCCTGGAAAAACCAAGACTCTGGACCCCAAGGCTGTTTTCCAAAGAACCAAGGTAAAGGTTTGGCTCAATTTCTACTTT ...x..::x.:......:....x.................:..........................x.....:..:........:..:..:......:.:..:..x........:..:..:.....x......xx.x:..x:..x.x..x:.x:... 158M 124/158 78.5% 158/94230402 0.0% 0/158 0.0% 81008167 NA +16196 chr4 + 190214555 118705590 118705589 118705824 235 TGGTCTGCTCTTGTTATTTAGGAACACTGCCTCATGGGGATCAAAGGAACTGTGAAGCGTAGCACAGACGGGGACTTCATTCATGCTAATGTTGACATTGACTTAATTATCACAGAAGAACCTGAAATTGGCAATATAGAAAAACCTGTAGAAATTTTTCATATAATTGAGCATTTTTGTCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAGATAGTACAATTCGACCAGGTA chr4 - 94230402 37698982 37698981 37699216 56531187 56531186 56531421 235 TGCTCTTTTCTGTCTACATAGGAGCACTGCCTCATGGGCATTAAAGGAACCGTGCGTCGCAGTACAGATGGTGACTTCATCCATGCTAATGTTGACATTGACCTCATTATCACAGAAGAGCCTGAAATTGGCAATATTGAAAAACCTGTAGAGATTTTCCATATCATTGAGCATTTCTGCCTTGGACGACGGCGTCTTCATCTTTTTGGAAGGGACAGTACAATTCGACCAGGTA ..x...x:...xx:..:x.....:..............x..:........:...x:x..:..:.....:..x........:.....................:.x..............:.................x..............:.....:.....x...........:..:.....xx..x.:..:........x........:..:................... 235M 198/235 84.3% 235/94230402 0.0% 0/235 0.0% 81006608 NA +17664 chr4 + 190214555 118709977 118709976 118710303 327 TCTTTTTTTCCTCCATTTCAGGCTGGCTCACAGTTGGACCAACGCTTACAAATAGCAACTACAATGCAGAAACATATGCATCCTATTTCAGTGCTCCTAATTCCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGA---------CGAGAAAGAAATAGATCTAACTTCCGAGGAGAAAGAGGTGGCTTTAGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTTCCACCTCGATAAT chr4 - 94230402 37701277 37701276 37701609 56528794 56528793 56529126 333 TCTGGTTTTGTTCC---TTAGGATGGCTGACTGTAGGACCCACCCTCACAAACAGTAATTTCAATGCAGAAACGTACTCTTCATATTTCACTGCTCCAAATTCCCACCTGACTGGCTGCACCGAAGAGATTGAGAGACTTCGGCCCAAGTCACCACCACCCAAGTCAAAGTCTGACCGGGGAGGTGGTGCTCCGAGGGGAGGAGGAAGAGGTGGGACTTCAGCAGGCCGAGGAGAACGGGGCAGAGAGAGGAACAGAACTAACTTCCGGGGTGAGAGGGGTGGCTTCAGAGGGGGACGAGGAGGTACCCACAGGGGAGGCTTCCCCACACGCTGAT ...xx....x:...---.:...x.....x..x..x.....x..x..:.....:..:..:.x............:..:x.x..x.......x......x......:..:.......:..:..x.....:..............:..x..:..:..x..x.....:..x..:........:........x.....x..:..x..............:.....x..x.....x...---------x....:..:..:...x..........:..x..:..:........:........x..x.....x:.x.....:..x.....:..xx.x..x.:.. 14M3D216M9I94M 254/324 78.4% 333/94230402 0.0% 12/324 3.7% 81008700 NA +3036 chr4 + 190214555 118714662 118714661 118714740 79 CTGCAACCTCCGCCTCCAGGGTTGAAGCGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx:x..:.x.....x...:.x...x:xx.x........::::...........:....x...--...... 71M2D6M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 100517536 89697019 +9208 chr4 + 190214555 118723506 118723505 118723666 161 AAGTTTCAATTAATTAAGCAGCTGACAGATCTCCTTGTGAACACAACAAAGGAAATCCACATAAGAAGAGCCTCCGTAAAGTCCTTTGTCTTCTACCAGGAACTGTCGGAAAACCATTTCTGGTTGTTCTCGCTGCTTTACAATTGTGAGCTAGGAAAAAA chr4 - 94230402 37709249 37709248 37709408 56520995 56520994 56521154 160 AAGTTTCT-TTAATTGAGAAGCTGGCAGATCTCTTTGTGAACACAGCATAAGAAATCCACGTAAGAAGCTCCTCCATGAATACTCTTGTCTTCTACTAGGAACTGCCGGAATAGCATCTCTGGCTGCTCCCGTTGTTTCACTATCATGAGCTGCAAAGAGA .......x-......:..x.....:........:...........:..x.:.........:.......xx.....:.:..xx.::...........:........:.....x.x...:.....:..:..:..:..:..:..x..::......:x:..:.:. 8M1D152M 124/160 77.5% 160/94230402 0.0% 1/160 0.6% 81014257 NA +10203 chr4 + 190214555 118731308 118731307 118731510 203 ATACTTACCATATCTGTGTTGATATGTGCAAAAGATGGCACATTAAATATTCCTTGGATCAGTTCTGGTGGGCTGCTTACTCCCAACCACAGGAACATGTGTAGACCATTAGCCAGTAAGAATATTCCTTCTTCTGAAAGACGGGACTCAGAGCAACGAACGGCAGCAGGTAACATTGTACTCTTGACATCTAACGTGTGCTG chr4 - 94230402 37710462 37710461 37710664 56519739 56519738 56519941 203 ATACTCACAGCTTCTGTGCTGATGTGTGCAAAAGACGGCACGTTGAAAAGCCCCTGGATGAGCTCAGGGGGTGTGCTGACCCCCAGCCACAGGAACATGCTCAGACCGTTGGCCAGAATGAAGGCTCCTCCTTCTGAGAGACGCTCCTCAGAGCAGCGCACTGCAGCTGGTACTGCATCACTCTTTAAATCCAAGTTGTGCTG .....:..x::x......:....:...........:.....:..:..x.x:..:.....x..:..x..x..xx....x..:....:.............:x:.....:..:.....x.x...x::....:.......:.....xxx.........:..x..x.....x....x:::xx:......x.x...:..xx....... 203M 149/203 73.4% 203/94230402 0.0% 0/203 0.0% 81020846 NA +11408 chr4 + 190214555 118732721 118732720 118732918 198 CAGCATGCTTACTATGGGCAGAAGTTGTGGGTAGAAGAAAAGCTGAGAGTCAGCCACACCCATGGTCATGACCAGCTGTCTCTGGTATGCTCGTTCATCAGTTGAGATCTCTGGTCTGCTGAGTAGTACACAGTTTTTCAACAAGCAATTCATGTACACTGGCAATACTTTCATGGAATCTGGTAGAATAAGCTGAAA chr4 - 94230402 37711185 37711184 37711382 56519021 56519020 56519218 198 CAACATACTTACGATCGGCAGAAGCTGGGGATAGAAGAACAGCTGTGTGTCAGCTACTCCCATAGACATGACCAGTTGTCGATGGTACGCCCTCTCATCAGTTGGAATTTCTGGTCTGCCAGTCAGCACACTGCTCTTCAGTAGACAGTTCACATACACTGGCAGCACCTTCATTGCATCTGGAAGGATGAGCTGAAA ..:...:.....x..x........:..x..:........x.....x.x......:..x.....:.x.........:....xx.....:..:.x:..........::..:..........:::x:..:....x.:.:....::.::..:....::..........::..:.....x.x......x..:..:........ 198M 150/198 75.8% 198/94230402 0.0% 0/198 0.0% 81021536 NA +3027 chr4 + 190214555 118736003 118736002 118736050 48 TTGTTTCTAGTTATATGTCTTTTTTTTTTTTTTTTTTTTTTTGCCCAC chr4 - 94230402 81807449 81807448 81807496 12422907 12422906 12422954 48 TTATTTTTAGTTACAAGTCTTTTTTTTTTTTTCCTTCTTTCTTTCCAC ..:...:......:.x................::..:...:.x:.... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 36928554 NA +9970 chr4 + 190214555 118739145 118739144 118739320 176 TTACCTGACTTGGCAAAGAAGTTGATAAGAGCATCTGTCTCACAGCTCTTATAAAGATCAGCTAGCTGAGAGCTGCAGTTTAAGCCAAGATTGTGAATCCGAAGTCTTCTTTGACCACTGATTGTCGTGTAAAGCACAGCACACTGTAGAAGCAACATTGAGGTCACATGTTTTTC chr4 - 94230402 37713107 37713106 37713276 56517127 56517126 56517296 170 TTACCTGACTTAGCAAAGAAGTTGATAAGTGCATCAGTCTCACAAGTCTTGTAGACATCAGCTAACTGGGTGCTACAGTTTAAACCTATATTGTGTATGCGAAGTCGTCTTTGCCCACTTATTGATGTGTAGAGGACAGCACACT------GCAACAGAGGAGCCAGATATCTTTC ...........:.................x.....x........:x....:..:.x........:...:.x...:........:..x.x......x..x.......x......x.....x....x:.....:..x..........------......xx.::.:..x..:.:.... 145M6D25M 138/170 81.2% 170/94230402 0.0% 6/170 3.5% 81026038 NA +10445 chr4 + 190214555 118740659 118740658 118740830 172 TCACCTGGATTAAGGCTCCACTGTCTTCACTGAGTTTGTCATCGTGCTTGAACTCCACGGTCACTGCCTTGTCACAATCGATGGCAGCCATTTCTACATCGGTGGTGTTGTTCATCAAGATTCCACCAAAGAAATCAGTGGCTCTGAAACCTAAAGATAAGGGAAAAAGGGA chr4 - 94230402 37714747 37714746 37714918 56515485 56515484 56515656 172 TTACCTGAATTAAGGCTCCACTGTCCTCATTCAGTTTGTCGTCATGTTTGAACTCTACTGTCACAGCCTTGTCACAGTCGACTGCTGCCATTTCTACATCCGTAGTGTTGTTCATGTAAATGGCCCCGAAGAAGTCAGTAGCCCTGAAGCCTACAGCCAGATGAAAGAGAAA .:.....:.................:...:.x........:..:..:........:..x.....x...........:....:x..x..............x..:...........xx.:..xx.x..:.....:.....:..:.....:....x..x:.::x....:..::. 172M 135/172 78.5% 172/94230402 0.0% 0/172 0.0% 81025912 NA +5619 chr4 + 190214555 118740936 118740935 118741081 146 ATTACCTGTGCTGGTACGAACCCTCATAATAGCATCAAAGCCTATTTTCTTTTCAATATCATTTCTGAGGTCGTTCAAAAATTGTTGTCTATCCAAGTGCATCTAAAAAATAAAAGTCTAATCAA----------TGTCCACCAGATGGCAGTAAA chr4 - 94230402 37715547 37715546 37715702 56514701 56514700 56514856 156 ATTACCTGTGCTTGTTCGAACCCTCATTATTGCATCGAATCCCGTCTTTTTCTCTATGTCCCTCCTGAGGTCAGTTAGGAACTGTGGGCTATCAGAATTGAGCTAGAAAGGTGAAGCAAAAGCAAGAGTTGCAGTTCACCACTGGGTGGCAGCAAA ............x..x...........x..x.....:..x..::.:..:..:..x..:..x:.:........:x.:.::..:...x.x.....x:.:.xx.x...:...:xx:...:xx..x...----------.xx....::.:......:... 125M10I21M 101/146 69.2% 156/94230402 0.0% 10/146 6.8% 81025389 NA +10363 chr4 + 190214555 118743981 118743980 118744186 206 CATTTACCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGCTGAGGAACCAGCCCCAGCGAGGCCACGTCCACATACTGACTAGGAAAGAGGAAGAGTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATTTGTTTGGGGCTGGAAAAGTATCTGGAAAAAAGATGCAAAAAAAAAGAAA chr4 - 94230402 37716303 37716302 37716504 56513899 56513898 56514100 202 CGCTTACCTGGAAATTGTTGTATTTGTACAGCGTGCCTCCAGTGTGCATGGTGACAAGACCCAGGGAAGCTATGTCCACATATTGATTTGGGAAGAGGAACAAATTCACGCAGCAGCCGTTAGCCACGCAGTCTCTGGCTAAGGACTCGTAAGAGTTTACCTGAGGCTGGAAGAGTGTCTGCACAAAA----TTAAAGAACAGAAA .::.........................x..x..x.........x..xx:.x:..x..x.....x..:..:.:.........:...:.x..:........x.:xx....:x.........x............::....:..x..x..:..::x:...:::..:........:...:....x.x....----:x...:..x..... 188M4D14M 152/202 75.2% 202/94230402 0.0% 4/202 2.0% 81027678 NA +8790 chr4 + 190214555 118744937 118744936 118745062 126 AAAGTACCTTCTCTTTGTCTGTATTAACCAGTTTTTTGTCATCTCTGTTTTTGAGCTTCCCTGGTGCTTCAGCAGTTGGCAAGGAAGAATGGAAGATGAACAGCTTCCCAGGACAGTCTGCTGCCT chr4 - 94230402 37716945 37716944 37717070 56513333 56513332 56513458 126 AAAATACCTTTTCTTTATCTGTGTTGAGTAGTTTTTTGTCATCTCTGTTTCTCAGTTTTCCCGGTGCTTCCGCAGTTGGCAATGAAGAGTGGAAGATAAACAGTTTCCCAGCACATTCTGCAGCCT ...:......:.....:.....:..:.x:.....................:.x..:..:..:........x...........x.....:........:.....:.......x...x.....x.... 126M 106/126 84.1% 126/94230402 0.0% 0/126 0.0% 81027992 NA +17759 chr4 + 190214555 118751989 118751988 118752906 918 TTCTCACCTTTAGTGCTTCCATGCCAGCCTGGATGACAGGAGCAAAGACAGTCTCATTTTCATTAGAGTCTGCAAACATGTCTGGAATCTGGTCCAACAAACTATAAGACATGAGTAAGCAAAAG-GTTTGAAATGTTTAGCATATTTTAATAAACTTCAAGCAATAAATCACTAACATTTCAAGCCTAAACACATATGGTATTTATTTGACACCAACACCTATAGGTAATTTTTCCTTAGGAAATGATATCTTAGCGTGGCTTGGCACCAAAATCTATGATTTGAATGGAACATTTACAAAATCATTCTTTGTAGATATTTTTTCTATTCACTGCAATACTGATCTCTTAGACCATAAATTCTTGGAACAGTGGCTACATCTTCAGTTATT-ACCATCATCATTG-----AATACATTCATCCATATATAGGAAATAGCTCC--CTTGCGATACCTTTCCAGAAAAAGAGGAAGAACCAATAGGGCTGAATGTGAGCATTTAAAAAATTCTTAGATACTGGTCTATATTTAA-------AAATCTCTTAGA-TACTTGT-CTATATTTAAAAAAGACTGACTTAACATAAATGATAGAGTTTTATAATCTGTGTCTTGAAACCCCCTTGCTAATGATAAAACAATGTATGATTGAATC---AAAACACAGTGCAATTAAAGACAAAACACCTGATTTA-----------CTTTTAAATTATAAAACACTTGATATTTACTTATGAATCACAGATTGGGATTCTTGATAGTTGACAAGGAAACCATCCAACAAAGGAACAAAGACTTCTCCAACATCAGTCACCACCATCATCTGAGGCTGGGCCAGATTACTCTTCACATTAAAGAAATGGAGAACTTTGTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCCTGTAAGGAAAAAAAAAA chr4 - 94230402 37719315 37719314 37720162 56510241 56510240 56511088 848 TTCTAACCTTTAGCGCCTCCATGCCAGCCTGGATAACAGGAGCAAAGATGGTCTCACTCTCATTAGTGTCTGCAAACATTTCAGGAATCTGGTCCAACAAGCTACGAAAGAGGA--AAGGATGAGTGTCTCAACTGCTCAGCGTATTCCTGAGAACCCCCCAAAACG------TACCATACCGAATCTGCACAGA---GGAAGATGTTTTCCA-----------------TGTTTTCCAAGCAAATTAAAGAATAATTTTGATTG----CTCAATCTCTT-TTTGAAT------TTTAAAA-----TTCTATTGAAATGTATT--------ACTTCAAAGCTGGT-------AACATAAA-----GGAA-------TACACACTAAGATATTTATCACATACATAGGAAGAAAAACATGCA-----ACGTGGCACAAAGCTGCAGCTCTCTCTCCCATTTTTGAAAT---GGCACAGCTGAT---GATGCATG-----GTTTAAAGCTGGCCTAAGTATGCTTCCAAATTCAGCACTGTGGAGTCGCTGATAGCACTTTTGCTTTGCCTCAGACGGGGAAAT---ACAGAACTTGAAGCATCTGATGACTT-----CTGAAGCATTTCAGCAAGTAC-------ATGCATCCCCCAAACTCTCCAAGACCATGAGCTAAAAGGAAAAACACTTATTATAGCATGTAGGTGTTACTCAGATATGGAATAATTGTACTTTACTTGTTAACAACAGATCGTGATTCCTGAAAGTTAACAAGGAAACCATCCAGCAAAGGAACAAAAACTTCTCCAACGTCTGAGACCACCATCATCTGAGGCTGAGCTAAGTTACTTTTCACATTAAAGAAGTGGAGGACCTTGTTGTAAGTGACAAAACCAACGCGAATTGCTGAGGATTCTTCCTGCTCTTCTCTGTGAGGAAAATTAAAA ....x........:..:.................:.............::......:.:.......x............x..x.................:...::.:.x.x..--...x.x:..-..:.x..x..:.:...:....::x:x:...::.xx:x..::------..x...x:.:.::..:x...x.---..x.xx.:...xx..-----------------.x...:.:x..x....x.x.xxx..::x.x.x...----.xx.....x.x-.......------....x..-----....x.xx.:..:.x..--------...x...x:...:.-------.x......-----....-------....:x:.x..x....-.:..:xxx...x.-----..x....x..-----.::.:.x.x.x....x.--..:x.xx.x..x..::x....x---..x.x.:.::..---.x..x...-----:......:xxxx.:..::..:xxx..:.x...:.:-------:.:..x..x.x.-:....x.-..x.:::.x.:.x:.:xx:.:---...x..x.x:x..x:.:.x..:.::.-----:....:.x::::x..x.:.:x-------...:..xx::x..x.---xx..x..x:..x:x.x....:x.......:.:x.x..-----------:.x:.x.:x...::..:.x...xxx.......:.x..:x......:.x.....:...x....:................:............:...........:..x.xx....................:..:.::.....:..............:.....:..:.....:..x....:......x..x........x..x.x:.....:........:....:.......xx.... 114M2D9M1I41M6D22M3D15M17D35M4D11M1D7M6D7M5D17M8D14M7D8M5D4M7D16M1I13M5I10M5D17M2I22M3D12M3D8M5D35M7I12M1I7M1I21M3D26M5D21M7D15M3I37M11I240M 560/816 68.6% 848/94230402 0.0% 134/816 16.4% 81032674 NA +8381 chr4 + 190214555 118757711 118757710 118757905 195 GTTGCCTTACTTTGGAATTTTTTCCAGCATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTATATGAAACATCAATCATGAAGATAAAGGCTGGTGGGTTGGGAGGCTTACTCTTCTATAGGAAAGCAAACACATCACATAAATAAAGTAAAT-ACATTGCATAATCAAATGTCAA chr4 - 94230402 37722200 37722199 37722389 56508014 56508013 56508203 190 GTTTCTTTACCTGGGAAGTTTATCGAGAAGAGTCTTCAGTTCGTCACATATGAGTTTAACGAGGCCGCTGTTTATATTTCTGTATGATACATCAATCATGAAGATATAAGCGGGTGGATTTGGAGGCTTGTTATTCTACAGAAAA------AAATATCATTAACAGGGAAAATGAGATGGTGTCCTGATATGTCAA ...x.:....:.x....x...x..x..x.x:...........x...........:..:..:..x..::.x.....:..x..:.....x..................x.:..x.....:..x........::.x.....:..:...------.x..xx...x..:.::.x....-.x..x.::.xx.x.x....... 145M6D22M1I22M 141/189 74.6% 190/94230402 0.0% 7/189 3.7% 81035511 NA +9162 chr4 + 190214555 118764760 118764759 118764955 196 TAACATCAATGTATAA-ACACTTGAAGTTCTGGGAACACTTACTCTGCAATAATCCAAAGTGGCAACATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAATGGTGGAACT---AATAAAAACAAAATAGGAAAGAAAATATTTTGTTTT chr4 - 94230402 37725275 37725274 37725474 56504929 56504928 56505128 200 TGACATCAAGTCATAACAGAATTTGCATATTGAAGATACTCACTCGGCAGTAATCCAAAGTAGCAACATATTCATATGAACCCAGAGATAGCTCAGGCCTTTCATAGTGGTCTACCCGTCGGCCAATGTGGTCCAGATGTTGGAAGAAGAATGGAGGGACTAAAAATCAGTACAAGAACAGAAAAAAAAGTTTATATTTT .:.......xx:....-.x.x..x:x:.x:..:::.:...:....x...:...........:..............x..x..:.......:...x..::.:...........:.x:.x..xx.......................:x.......x..:...---...x.:x....:.xx:....:....xx..x.:.... 16M1I144M3I36M 146/196 74.5% 200/94230402 0.0% 4/196 2.0% 81039485 NA +12655 chr4 + 190214555 118765379 118765378 118765640 262 TAATCTTTTAATGTTTGCGCTTAAGAGTGGAGAGGATTACTGTATTAGGGAAAG-ACTACACCACTAAGATCTCAGCTAAGGAACTTTAATTTGATTCAAATGTCTAAGAAGGTTAGTTCTGGCAAAGATCTGGAAGTCATCCAATAGCACAGGAACACTTATGAGTCACATACTGAGCACTTGGACAAATATGGCCTGGTATC-TCTGTAAAAACGAACTCCTGTTGCCTTGAGATTAATAGGGCTGGCTACTAAACCACTGC chr4 - 94230402 37726427 37726426 37726684 56503719 56503718 56503976 258 TAGCCTGTCAAGGTTCCTGTTTCAGAGCTGAAAATGTTACTGTATTAGGGAAGGCACTGTAGCACTGCGATC-CAGCTGAGGAAATCCAACTTGATACAAATGTCTAGAAAGGCTACTTCTGGCAAAGAGCTGGGATTCAGCCAAGAGCACAAGAACAGTTATGAGTCACATGCAGCACACTTGAACAAATATGGCATGGTATCTTCTGTGAAAACCAACAGTTGTCACAGTATGATTAATA-----GGTTATTTAACCACTGC ..::..x.:..x...:x:.:..x....:x..:.:x:................:.-...::.x....:x....-.....:.....x.::..:.....x..........::....:..x............x....:.x...x....x......:.....x.............:.x.x:......:...........x.......-.....:.....x...xx:...::.xx.:x........-----..:..:.x......... 54M1I17M1D131M1I37M5D17M 197/256 77.0% 258/94230402 0.0% 8/256 3.1% 81038952 NA +9831 chr4 + 190214555 118768163 118768162 118768340 178 CACTGCTTACCATCATTCACACAGTTGCAAAATCCACACTGATATCTCCTTCCTCCTTCGATGAACTGCATAAATGGGCACATGTAGGCCTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTATGGAGAAGCAAGAAAAATTAAATGAA chr4 - 94230402 37727066 37727065 37727235 56503168 56503167 56503337 170 CACCACTTACCATCGTTTATACAATTGCAAAATCCACACTGGTATCTTCTACCACCTTCAATAAACTGCATGAAAGGACACATATAAGCCTTGCACCTGTTACATCGGATTGGTCCGGCCTCACCATGGTTTACAACATAAAGAGGTGTCTA--------AAAAAAGAGGTAAATGAA ...::.........:..:.:...:.................:.....:..x..x.....:..:........:..x..:.....:..:..............:....x..:......:x:...:..:..:.....x.x:.....:..xx....--------x..:..:.:x........ 152M8D18M 133/170 78.2% 170/94230402 0.0% 8/170 4.7% 81041097 NA +8601 chr4 + 190214555 118797668 118797667 118797823 156 ATATATCATT----CTTACCTCATTTGAAGGAATGGTGGCAAAGGGCTTGATGACAGCAGCTAATGGAATCTGAGCTTGCTTAGCCATATCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTGAAACATTCAA chr4 - 94230402 37742206 37742205 37742365 56488038 56488037 56488197 160 ATACTTCATTAGACCTTACCTCATTTTGTGGAACAGTAGCAAAAGGCTGGATGACAGCTGCCAGTGGAATGCGAGCCTGTTTGGCCATATCTGAAGTTGATGGGAAGCAGTAGGTAGTACATCGGATGTAACGAGGGCTGGCATGACCTAGAACATCCAA ...:x.....----............x:x....::..:.....:....x.........x..:.:......x:....:..:..:...........x..xx....:..:.....x..x.....x......x.x.....:.......xx...::.....:... 10M4I146M 122/156 78.2% 160/94230402 0.0% 4/156 2.6% 81055462 NA +3144 chr4 + 190214555 118804796 118804795 118804944 149 AGTATCTACAACACCTATAATTTACATGAAACCCTTCTGTGTAT----------------TGAGCCCTCTATACACATATAAGCATACTTATGTGTATGCATGCATACACACACACACACACACACACACACACACACACACACATATACAAAGACTCATGTACA chr4 - 94230402 8395726 8395725 8395886 85834517 85834516 85834677 161 AGTTCATACAACCTTTAGAATTCAAGTGGAA----TTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACA ...x:x......x::..x....:.x:..:..----.:...::..----------------:::...x.x.:.::.::.:.:x::.x..x.:.:.x..:::...:..:.x:...:xx.:.................x.....x.::x...x...:x.:x.xx.... 31M4D9M16I105M 88/145 60.7% 161/94230402 0.0% 20/145 13.8% 110409070 79805485 +3052 chr4 + 190214555 118804849 118804848 118804912 64 TATACACATATAAGCATACTTATGTGTATGCATGCATACACACACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:..:.x.:.x.:..x:x:..:.......x.:...xx.:.................x..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 110409050 79805505 +3225 chr4 + 190214555 118804849 118804848 118804916 68 TATACACATATAAGCATACTTATGTGTATGCATGCATACACACACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...::::::....:...::x.x.:::....:....x....:xx.:.................x..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 110409054 79805501 +3302 chr4 + 190214555 118804849 118804848 118804934 86 TATACACATATAAGCATACTTATGTGTATGCATGCATACACACACACACACACACACACACACACACACACACACATATACAAAGA chr4 - 94230402 8395789 8395788 8395874 85834529 85834528 85834614 86 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA .:.::::..:.:x.....xx:....:.x.:...:::..::.x:...:xx.:.................x.....x..:x.:...:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 110409060 79805495 +3167 chr4 + 190214555 118804856 118804855 118804921 66 ATATAAGCATACTTATGTGTATGCATGCATACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:..::..::..::....:::..:.::..:::.:.:...xx........::............. 66M 43/66 65.2% 66/94230402 0.0% 0/66 0.0% 103840037 86374518 +3068 chr4 + 190214555 118804870 118804869 118804918 49 ATGTGTATGCATGCATACACACACACACACACACACACACACACACACA chr4 - 94230402 30570627 30570626 30570675 63659728 63659727 63659776 49 ATTTGTATGCATGCATCCAGACACACACACACAGGCACAAGTACACATA ..x.............x..x.............x:....x::.....:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 88234243 NA +8201 chr4 + 190214555 118805831 118805830 118805977 147 AAAAACAAATACCTTGGTCTTGTATCATGCAATCTGTAGTGACCAGGGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATCTGATAAATAAGACATCAAGAGC chr4 - 94230402 37743723 37743722 37743868 56486535 56486534 56486680 146 AAAGACAGTTACCTTGATCTTGGATTAAGCAGTCTGTGGTGACAAGAGGAGGAACCTGTCCTCTTGTGTTTGTAGCATATATCTGCCCTCCCCTAGAAGATTTATCATTTTCAATCACTTGAATCTGATAAATAAGA-AGCAAGAAC ...:...:x.......:.....x..:.x...:.....:.....x..:.....:.:...x.....x.....x..:.....x.::..:.....:..:xx:.x.:.......:........:..:...............-.x.....:. 137M1D9M 113/146 77.4% 146/94230402 0.0% 1/146 0.7% 81062108 NA +7287 chr4 + 190214555 118815021 118815020 118815159 139 TACTTACTGGGCTAGGGATAGAGTCAGGATCCAGCTTCTTCTGGGGCTGTGGCGGACCAGCCATCTGTGCAGGACCTCCAGGGAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCTGC chr4 - 94230402 37746802 37746801 37746934 56483469 56483468 56483601 133 TACTCACTGGGCTTGGAATCGAGTCAGGATCGAGCCTCTT------CTGTGGTGGACCGGAGAGCTGTGCTGGACCTCCAGGAAAAGCACCAGGATATGACAGTTGAGATCCTGCCATCTGAGGGCCATAGTTTCCTGC ....:........x..:..x...........x...:....------......:.....:.xx.x......x...........:..:x.x..x..:..x........x.xx...........:..:...x....xx.... 40M6D93M 106/133 79.7% 133/94230402 0.0% 6/133 4.5% 81068219 NA +3210 chr4 + 190214555 118826591 118826590 118826637 47 GAAGTCGAAAATATTCTTTTTTTTTTGGTCTTTTTTTTTCTTTTTTT chr4 - 94230402 67467705 67467704 67467751 26762652 26762651 26762698 47 GAAGCCTAAAAAATTCTTTTTATCTTAATCTTTTTTTTTCTTTTTTT ....:.x....x.........x.:..::................... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 51358886 NA +3008 chr4 + 190214555 118846836 118846835 118846891 56 AAAAAAGTATATACACACACACACACACACACACACACACACACTTATATATATAT chr4 - 94230402 87372734 87372733 87372789 6857614 6857613 6857669 56 AAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTAT ......x...x.x..x...........x.........:x:.:..x...:..::... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 31474102 NA +3268 chr4 + 190214555 118876703 118876702 118876809 107 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTCTGTCTCTCTCTCTCTTTCCCTTTCCTTCCCTTTTCTTTTTTTTTCTTTCTTCCTTCTTTTTG chr4 - 94230402 91731746 91731745 91731852 2498551 2498550 2498657 107 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTG ..::.:x.........x::..x.....:...:::..x........:x.:.xxxxx......:.x:..::.:......x...:xx:x...x..x..:..:x::.::.. 107M 65/107 60.7% 107/94230402 0.0% 0/107 0.0% 27144957 NA +12869 chr4 + 190214555 118888729 118888728 118889173 445 CTCCTGTGTGTGAA----------GCTGCTTTCCTTTCCTCGAAGGTGGGCCGAGCAAAGGAGAGTGACGCAAGAGTGGGCTGTGTCCTGGATGCTGCGAGCGCCTCTGCCTCCTTGAGAATGAGCCCATTAGCCGCACAAATTCGCAGCAGGCGGCTGGGGCGGCGGCTGGGGCAGCGGCTGCAGCAGCGGCG-GACGCTCTGCATTACCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCGTCAAGCTCTTCATGCTGCCCAACTAAAAGGAAAACATGGGCACAGGGGATTTTATCTGCATTTCCATGACTGGAGGGGCGCCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCAGAAGCAGCCCTTACAAGTTGCAAAGGTAGGACCTGAACGAAGTGTCACGGCTCTGTG chr4 - 94230402 37776036 37776035 37776432 56453971 56453970 56454367 397 CTTCTTTGTGTGCATTTCCTAAGTGTTACTTACTTTACTTTGAAGGTGGGCTGAGCATAGGAATCTGACGAAAGAGTGGGCTGTGCCCTTGATCT---GAGAGCTCTTACATTCTTCTGAATGAATACATTTGCTAGTGCAGTACGCAGCAG-------------------------------CAGCAGCAGTGTGGTGCTCTGGGTCTCCAGCTCT----------------GCCTCAGGCTCGCTGAACATCTGC-----AAGACAATTTTTTTATGTTCTGTAAA----TGAATGCTGCCTAATTGCACCAGGAAAATGGGCACGGGGGATTATATCTGCATTGCTATGAGTGGAGGGGCGCCTTGGGGCTTTAGATTGCAAGGTGGCAAGGAGCAAAAGCAGCCTTTGCAAATCGCCAAGGTAGGATCATGAGATGTTGTCAGTGTTTTGTG ..:..x......x.----------.:.:...x.:..x.:.:..........:.....x....:xx.....x..............:...x...x:---...x..:::.:.x.:...xx......::x....x..::xxxx.:.x........-------------------------------.......:.:.-.::......x:.:x..x:x...----------------...:x.:...x:x..x:....:x.-----x.xx...x:..:x.x...:::..x..----.xx........:..:.:x.xx:::..x........:.......x..........x.:....x............:.....x..:.......................:........:..:...:.:..x.........:.xx:.x:x:x.....xx.:.:.... 14M10I71M3D54M31D11M1I22M16D24M5D26M4D164M 273/386 70.7% 397/94230402 0.0% 70/386 18.1% 81112693 NA +3161 chr4 + 190214555 118899191 118899190 118899272 82 TATCCCATATACAGGGTGTATGTACATATATATAAAATATAGTATATATGTACATGT-ACTGATGGGCTAATATTTTATGTAC chr4 - 94230402 61431923 61431922 61432003 32798400 32798399 32798480 81 TGTCCTATATATAGTGTGTGTGTATATATATATATAATATAGGATATTAATTGATGTAACTGTTTACCT--TGTTTTATATGC .:...:.....:..x....:....:.........x.......x....xx:.xx....-....x.x:x..--.:......:.:. 57M1I11M2D12M 60/80 75.0% 81/94230402 0.0% 3/80 3.8% 57467268 NA +3527 chr4 + 190214555 118916687 118916686 118916769 83 TGCTTTCTTTTTCTTCTTCCTCTTCCTCTTTTATTTTT--CTTTCTTTTTTTTTTTTTTTTTTCTAGAAACAGGG-----TCTTACTCTG chr4 - 94230402 70081427 70081426 70081516 24148887 24148886 24148976 90 TGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTG ..::..:.....:.......x..:x.x.xx.x......--..:...:.:.............:..x:...:.:..-----.x........ 38M2I35M5I10M 63/83 75.9% 90/94230402 0.0% 7/83 8.4% 48835260 NA +11936 chr4 + 190214555 118918338 118918337 118918624 287 AACATTAAACAAA--CCTACAGATGTGTTTGGCTAAGTGGTTCA--TCCAATAGGTAATGTATTTTACACATTATTTCATAGTATTCTGTTCGTTGGTTGTTGAGACTATGTTCAAATAGAAATGGAAAGGGGTTTATCACTAGAAACAGGTTTGATTTCCTTAAAAGGCAGTTGTTTCTTTTTTCCTTTGCTTCTCTGGAGAATTGGCTGCAAACTGGGAATAGTTCTCCTCTGACTCATTTGCAGAGCAGCACTAGAGCATATAGAGTTCAGATAAAATTATAATGAAA chr4 - 94230402 37795017 37795016 37795294 56435109 56435108 56435386 278 AACATTAAACAATGTTCTATAGTTATGAGTGTTTTTATAATCCAAATAGAGTAGGTAGTGT-------------TTTTATAACTATCAATTCTTGGGTTATGGAGAATGTCTTCAAATAGAACTGGAGAGAGGTTTATCATTACAAACAGGTCTCATTCCCTTAAAAGGAAGTTGTTTCTTTTTTCTTCTGCTTCTTTGGAGATCTGGCTACAAACTAGGAATGGTTATTGTATGACTCACTTGAGAAGAATAGCTGCAGTGTAAAAAGTTCAGAAAGGATTTTAATAAAA ............x--:...:..x.:..xx..x:.xx:.::.:..--.xx.:......:...-------------...:...::xx..x:...x.x....:.x....x.:.x...........x....:..:.........:..x........:.x...:..........x................:.:.......:......x:.....:......:.....:...x.:x.x.......:...x::..x.xx:..:x..::..x.:........x.::...x....:... 13M2I29M2I15M13D217M 201/274 73.4% 278/94230402 0.0% 17/274 6.2% 81123321 NA +3027 chr4 + 190214555 118921768 118921767 118921811 44 ACTTTTCATATGCACACACACACACACACACACACATACTCTTT chr4 - 94230402 32106715 32106714 32106758 62123645 62123644 62123688 44 ACTTTTCATGTGCACACACACACACACGCACAAACAACCTTCTT .........:.................:....x...xx..::.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 86815053 NA +3570 chr4 + 190214555 118929077 118929076 118929211 135 AGAAAAAAAAAAGAAAAAGGAAGGAAGAT--GTATAGAAAGAGATAAAGGAAAAGTAGGAAGGATGGAGGAAAGAAAGGTAAATGGGAAAAAGGAAAGGATGGAGGGAAAGAGAGAAAGGAAGAGGA-GAAAGAAGAG chr4 - 94230402 33149059 33149058 33149196 61081207 61081206 61081344 138 AGAATAGAGCAGGTGATGGGAAAGCAGGTTAGTTTAGAAGGAAATAGAGGCAAAGTAGTAAGAAAAAAGAACAGAAATAAGATTAGGCAAAGGAAATCTGAGGGGAGAAGAAGGCATAAAAAGAGAATTAGAAAAGAG ....x.:.:x.:.x:.x:....:.x..:.--..x.....:..:...:...x.......x...:.x::..:.x.....x:x:.x.:..x...:.:..xxx:x..:.:...::..:x.x.::.....:.-x.:.:..... 29M2I96M1I10M 84/135 62.2% 138/94230402 0.0% 3/135 2.2% 85780018 NA +3107 chr4 + 190214555 118933804 118933803 118933849 46 ATAGCTGCTTTTTGCTGTTGTTGTTGTTTTTTTTTTTTTTTTTGGA chr4 - 94230402 51354293 51354292 51354338 42876065 42876064 42876110 46 ACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGA .:...x.:......:..........x:......:.........:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 67579511 NA +3225 chr4 + 190214555 119012295 119012294 119012406 112 CAGAGTGATCTTTAGCCTGAATTGGTTGTTGGTTTTAGTCTTGCTCTTTTAGCACATGGTTCCTTTTTTTTCCCCCTTTTCTTTTTTTTTTTTTTTTTTATTTTACTTTAAG chr4 - 94230402 59946212 59946211 59946316 34284087 34284086 34284191 105 CAGAAAAATATTTTGGTTGGAATGGATGT-------GATCTTGATCTCTTCTAACCTTGATTCTGTGATTTCTTCCTCTTCTTTTTTTTTTTTTTTTTGACTCATCTGTAGG ....:x:..x...x.x:..:.x...x...-------::.....x...:..xxx..x.x.x.:..x.xx....::...:....................x.:.:xx..x..:. 29M7D76M 71/105 67.6% 105/94230402 0.0% 7/105 6.7% 59066083 NA +8519 chr4 + 190214555 119023409 119023408 119023586 178 TTCTTTTTTTACTCCACTCAGATTCGAAATCAGAGCAAAGCCTCTGGGTCTGGGCTCTGTGAGGGAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCTCACCTACCCTGAAGTCATCAAGCTCATGGAAAGCATAACAGACTCTCTCCAAATGCTCATCAAAAGGTACA chr4 - 94230402 37837779 37837778 37837953 56392450 56392449 56392624 175 TTTGTTTTTGACTCA---TAGGTTCGCAACAAAAGCAAAGCAGCTAAGGCTGGCCTGTGTGAGGGGGATGAAGTGGTGTCTATCAATGGCAAACCCTGTGGAGACTTGACCTATGCTGAAGTTATCGTTCTGATGGAGAGCTTGACTGATGTCCTGCAGATGCTTATCAAGAGGTACA ..:x.....x....x---:..:....x..:x.:........xx..::.x....x..x........:...........x..:...........x..:....x...::.x.....:x.......:...:xx..x.....:...x.:..x..:x::..x..:.....:.....:....... 15M3D160M 130/175 74.3% 175/94230402 0.0% 3/175 1.7% 81185630 NA +33915 chr4 + 190214555 119026598 119026597 119028596 1999 AGTGTCTGGAATGA----TTTTTCTGTGTGCAGACCATCCAGTGGAATAAGTGAGGCTTTGATATCTGAAAATGAAAACAAAAACCTCGAGCATCTCACACATGGGGGTTATGTGGAAAGTACCACCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAA-GTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCAGAAGAGCTGATCTTAAGGGAGAAGGTAGAAGCGGTACAGCCTGGGCCTGTGGTTGAGCTGCAACTGTCCCTTTCACAGGAGAGACATAAGGGCGCTAGTGGCCCTTTAGTGGCTCTCCCGGGAGCTGAAAAATCTAAGTCTCCTGACCCAGACCCTAACTTGTCACATGACAGGATTGTCCACATAAATTCGATCCCTACTAATGAGAAAGCAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAGATGCGGGACTGCCCCGGGTGGAAGTGATCCTCGACTGCTCTGACAGGCAGAAGACAGAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTGTGTGGATTCTCCAGTGGAAGGAGGGCAGTCAGAAGCACCTCCTTCTCTGGTATCCTTTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAG---ATCCACGCTCGGAAAAAGATCACAGCAGACCTCACAAGCACCGAGCGCGGCATGCACGTAAGT---------------------TCTGCCTGGGCTTTCAGAAGGGGCTTGGGAGTTGGGGGCATTTTGCTGCTTCTTTGCTTGCATGAG-----------------TTTTTCAGCAAGATTTT--TCTTATGTTTCTCA--------TTGGCTTAAAGAAATATTTA-ATTAATGCA------------------CAAAATCACAAATGTGA---AATTGTGGAGAATACCAATTTCTAAATAGGAAGCAATAAGTCCGAACTTCATATAGATTTAAACATTTTTCA--TGAATTTCTTTTTATCCCCAAAGGCACAGGAACTGTTAAAGAAAATAATATTGTCAATGTGCCTGTTCATTTTGTTTCAGACAGT---TGAAATAGTTCATGTTAAAATAG----------CATAAGAAA-------------------------GCACTTG-------AAGTCATGTGGA---CTCAGTTTAAATGTCAAAAACTGTTGAGTCTGCTACTGAGAGGTGTC-TTTAAAATAAAAGCTCTACCATTGATATCAAAAGCAGATCCTTGTTTTGAAAAAAAATCATT-GTGCAGCTTGATGATGCTTGCAGAAGTGAGTTTGACAGACAAGGACATGTGTATACTGAGCAGTTACATGATCCTCTCCGTTGTGTAAGTCTTCATTTGACTGCAAAGTG--TTTCATCTACCTTCTAGACACAGAAGTCAGTCTCCAGGGCCATGTGGAGGCATTTAAATGTCTCCAAACATAAAATATATTTAAATTCAGTGCTTTGTATGGCATTTTGTTTTACCCAGGGGAGAGAAGACAGAAAGGAGAATTGGGATAAGAATTGCAGTTAGGTGTTAGGATT--TCTATTGTTTTATTTCACGTTTA-----TTTTTGTTTGTTTTTTTTTTTTTTTTTACTAATTTTGGAATTTTATTTGAGGATGTAAAGGCTGACAGGCAAAGGCACTTGACTGTATAT-ATGATACACAATGGCAATGAATTCGGTTATTCAAAGTAGGATATTAAGTCTTCTAACCTATTGTT-ATTCCTTTCAAAGCATATTTTTAGC---ATAACCATTTGTAGCTTTATTGGCAAGTGCTGTTAATCATTCCTTATACTTTAAGCATCTGTAGGCCATCTTCACATTTATAGCATATTAAACAAGAGTATTGAGACACCATTCACATACTTTACATGTTGGCAGTGAAGTTAGCAGCAACTGTGCAACTGTGACTGTCAAT-TTAATAAGTTGTATAACACTAGTCAAAAAAGG chr4 - 94230402 37842613 37842612 37844611 56385792 56385791 56387790 1999 AATTTCTTGAATTACTTGTTTATGTATGTGCAGATCCTCCAGTGGAATAAATGAAACTTTCAGCGCTGAAAAAGAAAATGGAAAGCATGATAACATAAAAAATGAGGACTATAGGGAGAGCACTACGCTGCAGATTAATACAGCCAAAGAGATACCCCATGGAGACTTATGCATCACAGAGATATACAGTGAGACTCACCAGG----GAGCAGGAGAAAGTAACATGCACTTTTCTGAAAA---GAAACAAGAGACCACACAAAGTCACAGAATTACTCCTAAAGTCATAGGCACCTCCAAAGCACTTGTGACTGATGAATCTGCTTTCAGAGGGAAGACAGAAGAAAGAAGGCCAAGCAAGATGGTTGAGCTGCAGTTATCCCTCTCAAATGATGGTCACAAGAGCACCAATGCTCCTGCTGTGACCCTCATAGGGGCAGAAAAATGCACCCCTTCAGGAAGAGGACCGAGTGTACAAGAAGACGGGACCAGCCCTGTAATTGCAATTCCCCTGAGTGTGAAAGAGGGCAACATCCAGTGGTCAAGCAAAGTAGTCCAGTTTTCTAGTAGCAAAGAGGTCAAGAGGATCCA---AAGTGCAGC------TCCATCCATCCCCAGGGTGGAGGTGATCCTAGCCTGTTCAGACAGGGAAAA---AGAAGGACCCACGTCTCTAGCTGAAAGGGGGTGTGTTGATTCTCAAGTGGAAGGAGGGCAGTCAGAAGCACCTCCTTCTCTGCCCTCCTTTGCAATCTCATCAGAAGGCACTGAGCAGGGAGAGGACAACCAGCACTCAGAAAGGGATCA---CAGACCTCTCAAGCACAGGGCAAGGCACGCAAGTAAGTACGTCCCATCTAATCATTTGCACTGCCTG-------AGGATATATTTTGTAACTTGAAACATCATCTCAGAATTTAGATTGCATTAGAAAAAGTAGTTAGAGCTTTTGTCTGCAGTTTTCTAACTTTCTGTCTTCTAAACGATTCTTGCTTTATATAATTTTTCAGGGTAATGCAATGCTCCTGGTAATGAGCCAAGAATAAAGCCATGCCTTAACTGTGCTGAATAAC----TTTGTTTAGTAGACTTCCACTCTGAAATT-------ATTTCATGACTGTCCAACTAAAAATACTTTTATTTCTAGA-----AAGGGCTG-----------AATTCTGCTGGCTTTCTCATACACACTAAG--AGGCAATCTGTGGAATATTTACAAAGAAAAAAGAAAAGAACACCAAAAAAAAAAAAACCCAACAAACCAGGTTGCTTGCACATGTCTAAATAAATCCTGTGGATTTCTCTGTTTACA--GCAAAAAC--TTGGTGCTGTCATT----TGCATCATCTAAAATCAAAGCCATGGTATTGCTCTCAAAAGCTGATAAT-------AAAAAAGGCTATTAGCAAAGCTTGATGTTGCCTGCAGATGAGATTTTGACAGACACTAGCATGTGTAT----AACTGTTACATGATCCTTTCGGTTTTGTCAGACTTCTCTAGACTGTAAAGTGAACTACTTCTCACTCCCATACCCAGAGGTCAA-CTACAAAATCTGTCCAAGAAGTTTACATG-----------AAAGTAAATTTGAA---ACTGAATCCAATGTCAGTTGATT----------GAGTGTAGATACa----------------------------------taaaattaatttattattttatt---aatttGAGACCTTTTTATTAGTGGGTTGTTTTTTCCCAACAATGTTAAGAATCCTGACCAGGGATTTAGTAACCGTATGGCAAAGCTGCTTGAATGTGTGCAATGATATACTGTAGCAACAAACTATTTCATATGTAGTGTTGGAATTAGTCTGCTAACCCTTTGCTAATTCCACTGTAAGCATATTTTTAGCATGATAACCATTTGTATC-TTATTTGCAAGTGGATTAAGCAGTTACTTATGC-CTAAGTGTCTGCTTCCAATCCACATATTT-TAACATTTTAAAT-AGAGCGTTTAAGAAGAGAGCTCATACTTAACATTTTGGCTGTGAAGTTAGAACCATCTATGGGATGGTGCCCATATATCTTAGTGAGTTGTACTGCCCT--TCTAATAAGG .:.x...x....x.----...x.x.:........:.x.............:...::....x.xxx.......x.....:::...x.x:..xx.:x.x.x.x...:..::...:x...:..:..:..x.........x:xx.:....x.:...:x.xx::::x...x..x.x.x..:.xxxx:.xx.x.x...:::..x..x:.----..:.x::....-..:::x:xx...x.x.x.:x.:---....x....:..x:xx.x:..::..x:..xx:....:x..:.xx:x.:.x..:xx.:..x..x:...:.x..x..:::x:::..x..:.:....::.....x::x.x:...x:.xxxx:.............::.:.....:...x.x..x:.x..:...:..:.:.:..x:...x:x...:.:...x::..:..x.......x:.xx:..:.x.:xxx..:x..x.::x.::x.x.x...:...:::x..x::...x.x.:..:..:x:x.:..x.....x:.:.xx:x...x.x....x.....::..:.....x.:..:...:...:....x.x.:::x......---.....x...------.x.:xxxx.x...x.......:........x.x...:..x......x.:..---......::x..x.::..x:..x.:..:..:......x.......x.....................................x:x........x:................x...........:.---.:.x:.:...:....::.....---........x.......x.:..:x....:...x......---------------------x.......-------..:.x:x::..x.x.::.x.:::...:x.x:::xxx:..x.x......x..-----------------...x..x...:xx..:.--::..x...:.:::.--------...x:...x.x..x.x..:.-:x.......------------------...:.x:.x.:x::..x---..:....xx.....x.----.:.:xx...x.::.xx:x.x..:...x..-------....x.xx.:.x.:..--.:..xx.x:......::.:.:.-----.:.::...-----------...x:..:::::x.x.:::.x..:x:.:xx--..:..:.---..:....x..xxx:xx....x..----------..x..:...-------------------------....x..-------..:..x......---...x.....x.--x.......--...:xx...::.:.----x.::..-.:......x.....:x.:x:....x.x........x...xx.-------......::::...-.::x.........x...:......x.x..x...........xx::.........----.:.x.............:..x...x...x..x....x:.x.....:......--:.x.x...xx..:.:.x..x....:....:-..x..::::.xxx:x:..:x:....x...-----------...:..x....:..---.x..xx.:xx...x..x..x:..----------...x.x...:.x.----------------------------------..::...--.:....:.......---x:...:-----.....:..x..xxx..x......:::x..x.xx..x:....::.:x::::....x..:x::.:.xxx.......x::.....x...:.::-......:..x:.:....::..:.xxx.:..x::x...:xx:x.x.x.....x......:x...:.-.....x:.xx...............---.............x.-.....x.......xxx.x.::x:..x.....:.-:....::....:xxx.x...:x..:....-..:...x.....:-....::..x.::x.xx:xx.x.......x....x.....x..........x.x..x..:..x:.:x...x.::.xx..-...:.:.......:x:.x..--..x..x.... 14M4I185M4D11M1I22M3D348M3D9M6D51M3D125M3I22M3D38M21I8M7D51M17I17M2I14M8I20M1I9M18I17M3I16M4D29M7D16M2I22M5D8M11D30M2D7M3I23M10I9M25I7M7I12M3I11M2D8M2D14M4D6M1I42M7D13M1I54M4D52M2I30M1D29M11D14M3D23M10D13M34D7M2I14M3D6M5I90M1I65M1I25M3I15M1D33M1D29M1D13M1D78M1I20M2D10M 1200/1854 64.7% 1999/94230402 0.0% 290/1854 15.6% 81183985 NA +88064 chr4 + 190214555 119029835 119029834 119032365 2531 CTTTCCCTAGGGCTCAGGAGGAGTGAAAGCCTGTCAGAAAAACAAGTGAAGGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCTTCTAACGGATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGTTTAAGAAGCGACGTCGGAGGGCCAGGAAATACACCCTAGTTAGCTACGGTACTGGCGAGCTTGAGCGAGAGGCGGACGAGGAGGAAGAAGGT---------------GACAAGGAGGATACATGTGAAGTAGCATTTCTTGGTGCAAGCGAATCAGAGGTGGATGAAGAGTTATTGTCTGACGTTGACGACAACACACAAGTTGTGAACTTTGACTGGGATTCTGGACTGGTGGACATTGAAAAGAAACTGAACAGAGGGGACAAGATGGAGATGTTACCAGACACCACAGGCAAGGGAGCCCTCATGTTTGCCAAGAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCCAAGCAGA-GAACAAGATGCTGCCCAGACCGATG-GCCTGAGAACCACGA-----------CTT---CTTACCAAAGAAAGGAGGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGGTGAGTCATGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATC---------------------CAGAGGATGGTCCCCATGAATAGAACGGCCAAACCCTTCCC---AGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGTCCCATTGCTGACTTTCCTGCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACGCCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGCCCAGCACAGCCCCCTCCATGGCCCCAGCCTGCCCCGTGGTCCCAGCCAGCCTTTTACGATTCGTCTGAGCGAATAGCTTCCCGAGATGAGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGACAAAACCCATGTTTACTTTTAAAGA---GCCCAAAGTAAGCCCAAATCCTGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTGATTCCGGACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCTGTTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTAACTCCAGTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCCCACCCAACCTCCTGCCTTCCCCACATCCAACCCATCAAAGGGCACCGTTGTCTCCTCCATCAAAATAGCC-CAGCCTTCTTACCCTC---CTGCCCGGCCTGCAAGTACTTTGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAATTACACACCCAAACCAACAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAATGA---GCTTCCAGGAATGAGTGGGAGAGGAGCTCAGCTCTTTGCTAAAAGGCAGTCGAGAATGGAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCCTCCTGTGGCCTATAATCCTATCCACTCGCCGTCTTACCCACTGGCTGCTCTCAAG------TCTCAGCCATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAAAGGGAAAGAAACCCCTCAATGCATTAGATGTCATGAAGCACCAACCGTATCAGCTCAATGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCA-AGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTACTCGGTACCAGCCTATACCTCTCCTCCTTCCTTCTTTGCAGAGGCCTCCTCACCAGTCAGTGCATCCCCAGTGCCTGTGGGCATTCCCACCTCGCCAAAGCAAGAATCAGCCTCATCATCTTATTTTGTGGCACCAAGGCCAAAGTTCTCAGCCAAGAAAAGTGGTGTCACAATTCAGGTGTGGAAACCATCTGTTGTGGAAGAGTAATCTTG-TAGCTGAAGCTGAGTGTCCACTTTGCTTGAAATGAATTGT--TTGCAGTGTTTCTTGAGT-CCCTGAGAATGCCTAGCAAAGTCCTCAACTTACTTAAT---TTCAGATATGTCACCTCCTAATCTGGGTCCAAGG-AGTATAATATTTTTAATGAGTCAAAA---ATCCAACT-----CAGATTGACCTAAAATATATTTATCTTCTTTGCACACTTAAAAAATCCAGGAGCACCCCAAAATAGACATGTACCGTTATATTAAGTAAGCAGGAGACTTAGGATTTGTGCTGTA--------GCCACAAGAAAGACAGTGATCAGT chr4 - 94230402 37847225 37847224 37849758 56380645 56380644 56383178 2534 CTTTCCACAGGACTCCGGCGAAGTGAGAGCCTGTCAGAGAAGCAGGTCAAAGAAGCCAAATCTAAATGTAAAAGTATTGCATTGCTGCTGACGGCAGCTCCCAATCCCAATTCCAAGGGGGTGTTAATGTTCAAGAAGCGTCGTCAAAGGGCGAGGAAGTATACTTTAGTCAGCTACGGGACTGGGGAGCTCGAACGTGACGAAGACGAAGGAGAAGAAGGTGAAGTTGAAGAGGGGGACAAAGAAAATACTTTTGAAGTGAGTTTGCTTGCAACAAGTGAGTCAGAAATAGATGAAGATTTCTTCTCTGACATTGACAACGACAAGAAGATTGTGACATTTGATTGGGACAGCGGTCTACTTGAGGTTGAAAAGAAGACGAAAAGTGGAGACGAGATGCAGACGCTTCCAGAGACAACAGGTAAAGGGGCCCTCATGTTTGCCAGGAGACGGCAGAGGATGGATCAGATTACAGCTGAGCAAGAGGAGATGAAGGCACGCACCATG-CATGCAGAGGAACAAAGGG------AAGTCACTGTGTCAGAGAACTTCCAGAAAGTAAGCTCTTCAGCCTATCAAACAAAAGAGGAAGAAACGTTAAGACAGCAACCCTGCATTAGCAAAAGCTATGCAGACGTGAGCCAGAACGATGGTAAAACTGTACAACAAAATGGGTTTGGTTTAGCACC--AGACA-CAAACCTCTCTTTTCAGTCTTCTGAAGCTCAAAAAGCAGCATCTTTGAACAGAACAGCTAAACCCTTCCCTTTTGGGGTTCAAAACCGAGCAGCTGCACCATTTTCACCCACGAGAAACGTCACTAGTCCTCTTTCAGATTTACCAGCACCACCTCCCTACTGCTCTATCAGCCCACCACCAGAGGCTTTATACAGACCTCTGTCAGCTCCCGCAGCAAGCAAAGCTGCGCCAATTCTGTGGTCACACACAG------------AGCCAACC---------------GAACGCATAGCATCCAGAGATGAGAGGATTGCAGTGCCAGCCAAAAGAACTGGGATACTGCAAGAGGCAAAGAGAAGGAGCACATCAAAGCCTATGTTCTCTTTCAAAGAAGCACCCAAAGTAAGTCCGAATCCTGCCCTGTTGTCCCTTGTACACAATGCAGAAGGCAAAAAAGGTTCTGGAGCTGGTTTTGAGTCAGGACCCGAAGAAGACTACCTCAGTTTGGGAGCAGAAGCTTGCAATTTCATGCAGAGTCAAGCATCTAAGCAAAAGGCCCCTCCTCCTATTGCTCCAAAACCTTCACTCAAGGTCTC-TCCTGCTG--CTGGTACCCCGGTTTCACCAGTTTGGTCACCAGCTGTGGCTTCTAACAAGGCTCCTTCTTTCCCAGC-TCCAGCCTCACCGCAGGCAGCATATCCTGCAGCACCCAAATCCCCACAGTATCCTCATTCTCCCTCTGCCAATCCCCCAAATACTCTCAACCTATCTGGTCCTTTCAAAGGGCCTCAGGCAACCCTAGCGAGTCCAAACCACCCAGCCAAGACACCAA---CCACACCAAGTG---------------CTGGAGAAACAAAGCCGCCCTTTGAGATGCCACCAGATATGAGGGGAAAAGGAGCACAATTATTTGCCAGAAGGCACTCTCGAATGGAGAAGTACGTGGTTGATTCAGAGACTGTGCAAGCAAACATGGCACGAGCCTCATCTCCAACTCCATCTTTACCAGCTTCTTGGAAATACTCATCTAATGTCCGAGCACCTCCACCTGTTGCTTATAATCCCATACACAGTCCATCTTATCCTCCTGCTGCTACCAAGCCCTTCCCTAAGTCCACTGCTG------CTACTAAAAATACCAAAAGAAAACCTAAGAAAGGTCTCAATGCTTTGGATATTATGAAACATCAACCTTACCAACTTGATGCATCATTATTTACTTTTCAACCTCCCAGTAATAAGGAAAGCCT--------AGCTACTAAGCAGATACCAAAGTTGCCC--ACTTCAAAACAAGCTATGTCCTTCCGACTGCCTGGTTCTGGATCTCCTACAAACGCCCGGGCATCTTCAGTGTACTCTGTGCCAGCCTACAGTTCGCAACCATCGTTCCAATCAAATGCCTCCACCCCAGTAAATGAATCATACACACCGACAGGCTATTCTGCATTTTCTAAGCCAGAATCCACTACATCCTCTTTGTTTACTGCTCCGAGGCCAAAATTTTCAGCAAAGAAAGCTGGCGTCATTGCACAGGTGTGGAAGCCATCTGTTATTGAAGAGTAAACATGATAGCTAAAACTTAGTGTCCACCTTGCTTGCAATGCATTATTGTTGCAGTAGTAACTGGGCACACAAAGAGTGTCAAGAGTATTCCTTAGCTTATGTAATATCTTCAGATGTATCATC-CCAAATCTGGGTCCAAAATACTTGAACTTTTTTAAGGAATCAAAATAGATACAAATTTTAGCATATTTATGCACATTA---TCAGATGCTTTATACACATAAA------------ATCCTGCAATAAATAGACACCATTGTGTTAAGTAAGCAGGACACT--AGGTTTTTGCTTTAAGTTGACTACAACAGAAACAACAGTAAGCAGT ......x:...:...x..x.:.....:...........:..:..:..x..:.....x...........:.....:.....x:.x..x..:....xx........:.....:..............:.....:........x....::.....x.....:..:..::....:........x.....x.....:..:..x..x.x:.....:.::.........---------------.....:..::....x.x......::xx..x....xx:....:..:.....::.:........x..x..x......:.....:..:...x:x.::......xx.....:.....:xx:..x..:x.x..x:..........:x:...x..x..:...:.....x...:.:.x.....x..x.....:..:..:................:...:x..x....:...........:.....:x.:x....:...:xx....:.x.::xx.:.-..x.....-......::x.------.:::.:x..-.:.x......:x.x.-----------...---.:..:....x...:........:x..x.....xx...:xx..x::.x...........:::x..x.....:..x:::xx...:x.x::.x:x.....:.....x..::..xx::..:.--.....-.....x..---------------------..:.:::::.:x:.:x....:.....:..:...........---x...x:.xx:..:.::x.....:.x..x..:..:..x..xx.....:.x..x.....:x..x.x..:..x..x.....x..x..:....x:x.x:...x:..x..x..x..x..:..x.x....xxxx.x...:x...x::x..x:..xx...xxx...xx:..::...:.x..xx.x.------------.....:..---------------..:..x.....x...x.............:x..........x........x..:...:....:.....x..:..:..:.....:x....:..:.....:x....:.....---:...........:..:.......xx..x.....x..:x.x..x...x...........x::..:x..........xxx...x..x.....x.................:.....:.....:.....:...........:..::xxx.xx.:..:......:...........:..............x..x.....x:...-....x.::--.x.xx..:..:.....x.....:.....x....xx......:.:.x.x.:x.....x.:.....x:.-....:..:xx.x:x:....x.:.xx:..x.xx..:.x....xx..-...:x.:..:.::...---.....x:x..:x...:....:.x...x.:x.......:........:..x..:...:.xx....x....x:..::..x..x....:x..x..:---.........xx.---------------....x.x.::::::..::..xx...---..:x....:x.....x..:.:......x..::.x.....:.:......x..xx.............:.....:........x..x.....:..xx..::x..x.....::x:.....x.........:.x..:..:xx......:.....x..:.................x.....x..:........:..x...xxx..:.....:..x.:x......x:....------:..x..:.xx.x....------.:x.:....xx:x...:.:...:xxx......xx:........x..:...:.:.....:..:.....x..:..:..::.......x..:........:........x::.:xx.....x:....--------..::.::.:x..-.x::...xx:x....--:.:x::..:......x.x:.:::...:.::x:x::.x...xx..x.....:..:.:x.:...x..x...........x..:........:.x:..x.xx..x..x...:xxx..:.x......x.x.....x.:..x...x:xx:::..x:::...xx.:.::.x.:x:.x....x......x:.:x....x....xx...::x..x..:........:..:.....x......:x...:....:x::x...........:.........:.x.........x.x..-.....:..:..x.........:.......x....x...:.--.......:x.xx:..:.:-.x.x:...:..:.x..x:x.x....:.:....:x....---.......:.:...:.-..x.............::-.x.xx..:x.......x..:......---..x...x.-----..x...x.:x:.x.x..---.:.xx.x....::....x....------------.:..::x....:.:.x::...:..:.:..............x...--:.:...x....x..--------:.x...::..x:.....:.x.... 222M15I270M1D8M1I10M6D9M1I15M11I3M3I118M2D5M1D8M21I41M3I179M12D8M15D110M3I201M1D8M2D67M1D45M1I16M3I93M3D12M15D25M3I226M6I16M6D124M8D12M1I15M2D287M1I40M2I18M1I38M3I15M1D18M1I26M3I8M5I17M3D22M12D45M2D14M8I24M 1711/2438 70.2% 2534/94230402 0.0% 189/2438 7.8% 81182610 NA +3309 chr4 + 190214555 119043016 119043015 119043094 79 ATGAATGACTG--ATCTGTTCATTGTATTTTGTTTGTTTGGTTGGTTGTTTTTTTTCTTTTGTTTTTGTTTTGTTTTGTTT chr4 - 94230402 22454279 22454278 22454358 71776045 71776044 71776124 80 ATGAAAGGCTGCAGTCTGATTTTTTT-TGTTGTTTGTTTGGTTGGTTGTTTTTCTGTTGTTGTTGTTGTTTTCCATTTTTT .....x.:...--:....x.:x..x.-.x........................:.x:.x.....x.......x:x..x... 11M2I13M1D54M 61/78 78.2% 80/94230402 0.0% 3/78 3.8% 96588737 93625818 +3032 chr4 + 190214555 119043028 119043027 119043089 62 TCTGTTCATTGTATTTTGTTTGTTTGGTTGGTTGTTTTTTTTCTTTTGTTTTTGTTTTGTTT chr4 - 94230402 87951238 87951237 87951299 6279104 6279103 6279165 62 TCTCTGCGTTGGTTTTTGGTTGGTTGGTTGGTTGTTTTTTTTTATTTTTTTTTCCCTGATTT ...x.x.:...xx.....x...x...................:x...x.....x::.x:... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 31091790 NA +19558 chr4 + 190214555 119057379 119057378 119057947 569 TTAATATTTTCATTGTTTTTAGGAGAG------TGGGCGCTCCCTTTCTCTTCCTGGAAGATC---------------AGTCCCACCCCCCATTTCTACATCTCCTTGGGTATACCAGCCTACTTATAGTTACTCTAGTAAACCAACCGATGGACTAGAGAAAGCAAACAAGAGACCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAGCTCGGAGGAAGGTGCTTCCAGGGCCTCCAGAGGATTGGAATGAAAGACTGTCCTATATTCCTCAAACCCAGAAGGCCTATATGGGCTCAT---GTGGAAGGCAAGAGTATAATGTCACAGCCAATAATAA---------TATGTCCA---CCACCTCCCAATATGGTTCACAGTTGCCATATGCATATTATAGGCAGGCTTCAAGAAATGATTCTGCAATCATGTCCATGGAAACCAGGTCTGATTACTGTCTTCCAGTAGCTGATTACAACTACAACCCACACCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGAAGAAC chr4 - 94230402 37864728 37864727 37865324 56365079 56365078 56365675 597 TTGGTATTTT--GTTTTCCTAGGAAAGAAGCAGTGGACGTTCATTATCACTTCCTGGGAAACCTTCATTCATTTCTCGAGCCACATCTCCCACTTCT------CCTCTTATATTTCAGCCTGCCCCTGACTACTTCAGCAAGCCAGACACAGCAGCTGACAAGCCTGGCAAGAGACTGACTCCTTGGGAAGCAGCAGCAAAATCCCCTCTTGGTCTAGTGGATGAAGCTTTTGGGCCACAAAATATGCAGGAATCCATTGCTGCTAATGTAGTATCAGCTGCACACAGGAAAATGCTTCCTGAGCCTCCAGATGAATGGAAAAAAAAAGTTTCTTATGATCCTCCAGGCCCAAGTGCTAGCCTAGCCTTATTAGGAGGAAAGCAACCGGGTGTTACAGCAGCCCGAAAGAGCTCTCTGTCTGTGTCAAATGCCACCACACAGGCTGGCTCTCAGCAGCAGTATGCTTACTGCAGTCAACGATCCCAAACAGATCCTGATATAATGTCCATGGATTCCAGGTCTGACTATGGCTTGTCAACAGCTGATTCAAACTACAATCCACAGCCAAAGGGATGGAGGCGTCCAACATGAACGGCAGAAGGGC ..::......--x.x..::.....:..------...:..:..x:.x..x........:.:.:.---------------..:.x..:.:....:....------...:xx:...x:......:.::x.:::....::..:..:...:x.:xx.x.x:x..x..:x.x::........::.......................:..:.....:..............x.....:x::..xx:...:..x.............:x..x.....:..x.....x..x.:x.....::.......x.:.........x..x.....x:...:.x.x..:...:x.....x.:x..x:.:x..:x::x.:.x..:..---.x....:....xx.x:.:x.::x:.....x:x..x.:---------.:....x.---.....x.x..:xx...:..x...:x..x:.....x..:.::..x..:xxx..xx:..xx...:...xx..x...........xx..........:..:x.::.x:..::........xx........:.....x....:.........:..:.x........x.x:.....::. 10M2D15M6I30M15I19M6D268M3I37M9I8M3I174M 383/561 68.3% 597/94230402 0.0% 44/561 7.8% 81192651 NA +3208 chr4 + 190214555 119058077 119058076 119058125 49 TGTGTGTGTGTGTGTGTGTGTATGTATGTGAATATACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ......::.....:...:.....x.:....x.:.:........:..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 93664817 NA +3461 chr4 + 190214555 119058081 119058080 119058129 49 TGTGTGTGTGTGTGTGTATGTATGTGAATATACACACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ......::.....:.........x..x:.:.............:..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 93664821 NA +3074 chr4 + 190214555 119074572 119074571 119074634 63 GTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACCCAACTGTACATCACCA chr4 - 94230402 59596906 59596905 59596967 34633436 34633435 34633497 62 GTGAGAGGGGAAAA-AACAAACAAAAATAACACCCACACAAAAAGCCCCACTATAGAGCACCA ..x...:..:...x-........:...x:...:......x....:...x...:..x.x..... 14M1D48M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 59477666 NA +3965 chr4 + 190214555 119101407 119101406 119101525 119 AAGAAAGAAAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGA-----------AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAA------AAAAAAGAAGGAAGGAAGGAAGAAAGGAAGG chr4 - 94230402 44053989 44053988 44054122 50176281 50176280 50176414 134 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAA--GACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAG .....x.:.:....:...:.:...:..:.x..::...x:::..-----------.............--:.x:.:..x...x:x......x........------....:x.::x.:.x:.............::. 43M11I13M2D30M6I31M 83/117 70.9% 134/94230402 0.0% 19/117 16.2% 75047418 NA +3115 chr4 + 190214555 119101415 119101414 119101491 77 AAGAGAGAGAGAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAA chr4 - 94230402 90835601 90835600 90835677 3394726 3394725 3394802 77 AATAGAAAGAGGAAAAAGCACCAAAAAAGTAAAGAAGAATCAAAACAATGAAAGAGAAAGAATAGAAATGAATGAAA ..x...:....:::....x.xx...:..:x......::.xx:...x..x.............x::...x:..x.... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 28265814 NA +3024 chr4 + 190214555 119101426 119101425 119101496 71 AGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAA chr4 - 94230402 25066986 25066985 25067056 69163347 69163346 69163417 71 AAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .:..x...x....::..x:.x...:..x::..:x::...::::.:..............x......::... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 94034440 NA +3056 chr4 + 190214555 119101448 119101447 119101565 118 GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAAGAAAAAAAAGAAGGAAGGAAGGAAGAAAGGAAGGAAAAAACAACAGCAATGGAGAAAAAGAGAGGATAACTGCA chr4 - 94230402 61334701 61334700 61334818 32895585 32895584 32895702 118 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGATTGGATTTATGCA ......:.....x......x.:x.:......:x:..:.:.x:xx..x.:..xx::x:...::x.x::....x.:x.........:.:x.:x..x.::..:.x...xx....xxx.... 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% 57766747 NA +3250 chr4 + 190214555 119101465 119101464 119101572 108 AAAGAGAAAGAAAGAAAAGAAAAGAAA---------------GAAAAAAAAGAAGGAAGGAAGGAAGAAAGGAAGGAAAAAACAACAGCAATGGAGAAAAAGAGAGGATAACTGCAGGAAGAA chr4 - 94230402 81274308 81274307 81274430 12955973 12955972 12956095 123 AAAGAGAAAAATACCAAAGAAAAAAAAACTGATGTTAGATCAGAAAAAAATGAGGTGAAGAAAGATGAAGGAAAGGAACATGTGGCATCAAAAGGGGATGACACTGTAAAGATGCAGAAAAAA .........:.x.xx........:...---------------........x..:.x:.:...:..x...:.:......x.x::::..x...x:.:.:.x:.x.xx.x.x.:x.....:..:.. 27M15I81M 72/108 66.7% 123/94230402 0.0% 15/108 13.9% 37827157 NA +3149 chr4 + 190214555 119101466 119101465 119101519 54 AAGAGAAAGAAAGAAAAGAAAAGAAAGAAAAAAAAGAAGGAAGGAAGGAAGAAA chr4 - 94230402 34672396 34672395 34672449 59557954 59557953 59558007 54 AACAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAAATGAGAAA ..x.:.......:..x:.........:......::..:..:.....:x:..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 84429070 NA +4518 chr4 + 190214555 119113889 119113888 119114040 152 ACTAACACTAATTACTCTCTGGGTATTACTTTTAGTGTCCTTCATAAAC--TATCTCATTTAATCCTCACAACAACCCTATGGGTCAAG-AACTGATATTAATTCTATTATACAGATGAGAAAACTGAGAATCATAGATGTTTAATAATTTGCTC chr4 - 94230402 10729113 10729112 10729256 83501147 83501146 83501290 144 ACTAATATTATGTACTC----------ACTCTGAAGATCCTGAATAAACAGGAATTGATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCC .....:.:..xx.....----------...:.x.:x:....xx......--x.x:.x.....:-........:.x....:..:.x:.:.-..:.:x...:.::..:...x.....:..:..........:xx....x.x...x.:........:. 17M10D22M2I12M1D25M1I65M 100/141 70.9% 144/94230402 0.0% 14/141 9.9% 108384776 81829779 +11173 chr4 + 190214555 119135717 119135716 119136014 298 AGCCTAATCTTTCCCTGTTCCTCCCTTTCGCCAGGAAGATATGAGTAGCTAAAGTATTTGGTGCTATATATAGCCAGTTGATGTCAGCTGAATGCCAGTCTCTTCAGAAAAGCTCAGTCCCCAGTTTGAGTCAG-AGTAGGGACCATGCTGTCCCAGGTTCAAGGATAAAAACCATCA-GGCCCAAGTG--------CCATCCATAGTCCATCTCCAGAGTCTTCCTCCACA-AACTGGGATTCATCCCCGCTGAAAAAGCACAATCTAACAGCAAGGTGAGTATG-TTGTTTCCTAAAATGTTTCATTA chr4 - 94230402 37888776 37888775 37889078 56341325 56341324 56341627 303 AGCCGAATCTTTCC-TGTTCTCTTCTTTTGCCAGGAAGATATGAGTGGCTGGAGTGTTTGATTCTATATATAACTAGTTGATGTCAGCTGGATGCCAATCCCTTTGAAGAGGATCAGCCCCCAGTTTGTCTCGGTACTAGGTACCATGCAGATCCAAGCACAAGGCTAGAAACCATCCTGGACCAGGCAGGTCACCCCCATTTAT-GACTAACTCTTGAAGCTTCAACTAAAGAGTTGAGATCACTTTTTTCTGCACAAACGA-----AACAGTACGGTAAGTGTATTTGTTTCTTGAAATATTTTGTCA ....x.........-.....::::....:.................:...::...:....:.x.........:.:...............:......:..:...:::.:.:.x....:..........xx..:.-.x....x.......x.x:...:.:x.....x..:........x-..x...:.::--------....::..-.x.:.x...:x..:x....xx.:.x.-.::..:...:xx.::::x...x.x..:.:x-----.....:.x...:...:.:-.......:.:....:...::.:. 14M1D119M1I43M1I10M8I8M1D26M1I30M5D18M1I23M 209/291 71.8% 303/94230402 0.0% 19/291 6.5% 81246941 NA +13555 chr4 + 190214555 119136487 119136486 119136892 406 AATAATGTCCCTTTGTTTTTAACAGGGAA---------CAAAAAA--ACCATGCTATCACATAATACTATGATGAAGCAGAGAAAACAGCAAGCAACAGCCATCATGAAGGAAGTCCATGGAAATGGTATCAATAAAAATCCTTCGTAGCATTAATATAGCACAGCATGAATGTGGCTCCATCCTGACGTTGTTTAATATTCCATAGTTTACTTCCTTTAGATTCTTGC-------TGTTCTGTCATAACAAACCTGGAGCTCTAGGGGGTGTAGAAAAGCCTATGGTAACTAATCCTTTTGTAGTCATCCTTTCTCATTTGGAAGCTATTTTCAGAGGAACAACTGCTGTAAAAGGCATGAAGCAATCTGACAGCTGATGTACATTCTGCTTGGCTTGCCTTCCACATTATAAGTTAAGATCA chr4 - 94230402 37890326 37890325 37890734 56339669 56339668 56340077 409 AAAAATGTGTGTTTTTTTTCAGCAAGGAAAAATCATATCAGAAAATCACAATGTTATCACATTCTGCCATGGTCAAAGAGAGGAAACAACAAGCATCAGCCATTATGGATGAAATACAGAGAAATGGTATAGCGCTGAACCCAACTTA--CTCTATAT-GCACTGTCC---TTTAGCCC--TCCCTAAAACATTTTTAATCACAGAGTTTTACTCTCTTACAGCTTTGTCTCTGAGTGTTTTGCCATAACTAATCTTGGG------GGAGTATCATGCTGCCTATGGTAACTAATCCTTTTGTAGTTGCCTCTTTTCATTTGAAAGCTATTTTCAGATGAACAACTGCTGT-GAAGGAATGAAGTAATCTAACAGCTGATGTACATTCTGCTAGGATAGCCTTTCAGAACATTATTTGGGGTTA ..x.....x:x...x....:.:..:....---------..:....--..x...:........xx.:.:...:.x..:x....:.....:......x.......:...:.x...:.x..x:..........x:xxxx:..:..xx.x..--x.:x....-....x.:x:---.x.:..:.--...:x.x:x::...xxx..:x..x.....xx:..::...x.x::...:-------....:..:......x..:..x.:.------..:..:.x:x:xx...........................:::.::..:.......:..............x.............-:....x......:.....:.....................x..x.x.....:..x.x:..x.x..::.:.:. 29M9I7M2I101M2D8M1D9M3D8M2D48M7I24M6D85M1D72M 279/391 71.4% 409/94230402 0.0% 33/391 8.4% 81246161 NA +3726 chr4 + 190214555 119141458 119141457 119141540 83 CTGCAACCTCCACTTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGCCTGCCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx.x:.:...:.........x...x.xx.x........::.:...........:....x....--:.....::. 72M2D9M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 100944332 89270223 +7978 chr4 + 190214555 119150860 119150859 119151049 190 ATTGTTTTACAGATGTTGATGGCATGGACCTGGGCAAAAAGGTCAGCATCCCCAGAGACATCATGTTGGAAGAATTATCCCATCTCAGTAACCGTGGTGCCAGGCTATTTAAGATGCGTCAAAGAAGATCTGACAAATACACATTTGAAAATTTCCAGTAT----CAATCTAGAGCACAAATAAATGTAGGTAT chr4 - 94230402 37895782 37895781 37895971 56334432 56334431 56334621 190 ATTGTATTGCAGTCTCACCCAGCTTAAACCTTGGAAAAAAGGTCAGCACCCCAAGAGACATCATGGTAGAGGAACTATCAACACTCAGCAACAGAGGCGCAAGACTCTTCAAGAGACGTCAGCGGAGATCTGACAAATACACATATGAAAATTATCATTATGTTGCAAACAAG----CCAAGAAATGTGAGTAT .....x..:...x:x:xxx::..x.::....x..x.............:...x............x.:..:...:....xxxx.....:...x.x..:..x..:..x..:....x:.....:x.:...................x........x:..x...----...x.x..----.x..x......::.... 161M4I8M4D17M 137/186 73.7% 190/94230402 0.0% 8/186 4.3% 81255078 NA +6483 chr4 + 190214555 119157943 119157942 119158155 213 GAAGTTTTGCATATATAGCTCCTATTATTGTGCTTACATTTTTGAGTTT----TCAGCAGAGTTTACTTTTGATTAAATACAGCACAGTATTGCTATGCAGAATGGGAAAGTGGATGGAAGTAACTTGGAAGGTGGTTCGCAGCAAGCCCCCTTGACTCCTCCCAACACCCCAGATCCACGAAGCCCTCCAAATCCAGACAACATTGCTCCAGGTAA chr4 - 94230402 37897995 37897994 37898207 56332196 56332195 56332408 213 GAACTCTTTCTTTTATTTCTTTTCTTTTT----TCATTTTTTTGCCTTTGATATCAATGATGTTTACTTCTACTCGAATGCAGCGTGGAGAGCCCATACACAGTGTTAAAATGGATGGCCTCAGTGTTGAAGGAATTCCCCAACACGCTCCAATGACTCCCCCTAATACACCTGATCCCCGGAGCCCACCGCATCCTGACAACATTGCCCCAGGTAA ...x.:..x.x.x...xx..::.x..x..----.:.:x......xx...----...::::x........:.:x.::...:....:::.x:xxx.:..:..x.:..xx...:.......xxx:.::x.x.....x:x.:.x..:..x..:..xx.......:..:..:..x..x.....x..:.....x..:x....x...........:........ 29M4D16M4I164M 137/209 65.6% 213/94230402 0.0% 8/209 3.8% 81259948 NA +13900 chr4 + 190214555 119164190 119164189 119164401 212 TTTTGCTAT-ATTTTTCCAAAGGATATTCTGGACCACTGAAGGAAATTCCTCCTGAAAAATTCAACACCACAGCTGTCCCTAAGTACTATCAATCTCCCTGGGAACAAGCCATTAGCAATGATCCGGAGCTTTTAGAGGCTTTATATCCTAAACTTTTCAAGCCTGAAGGAAAGGCAGAACTGCCTGATTACAGGAGCTTTAACAGGTAATTC chr4 - 94230402 37899775 37899774 37899987 56330416 56330415 56330628 213 TTTTGCCGTGATCTCCTTGCAGGATATTCTGGACCACTAAAAGAAATTCCTCCTGAAAAGTTCAACACTACTTCTGTGCCAAAGTATTATCAGTCTCCTTGGATAGAAGCCATTAGGGATGATCCAGAGCTGCTGGAGGCCTTATATCCTAAACTTTTCAAACCCGAGGCAAAGCCAGAACTGCCGGACTACAGGAGCTTTAACAGGTAATTC ......::.-..:.:::::x..................:..:.................:........:..xx....x..x.....:.....:.....:...:x.x..........x:.......:.....x:.:.....:....................:..:..:.x....x..........x..:........................ 9M1I203M 175/212 82.5% 213/94230402 0.0% 1/212 0.5% 81264415 NA +3343 chr4 + 190214555 119171783 119171782 119171854 72 ATATCTATTT-TTCACATTTTTTCCAAACACACAAACACACACACACACACACAAAACAAAACAAAACAAAAA chr4 - 94230402 7464462 7464461 7464530 86765873 86765872 86765941 69 ATACCTACTTCTTCGTGTTTTCCCCAC---CATGAA-ACAAACACACACACACAAAACGAAACAAAACAAAAA ...:...:..-...:::....::...x---..::..-...x.................:.............. 10M1I16M3D6M1D36M 56/68 82.4% 69/94230402 0.0% 5/68 7.4% 111707321 78507234 +13398 chr4 + 190214555 119185916 119185915 119186347 432 GACAAATTTGAATATTAATTGAGATCTGTTTTTTTTTTAATTTCCCACAGGGTTGCCACACCATTTGGAGGTTTTGAAAAAGCATCAAGAATGGTTAAATTTAAAGTTCCAGATTTTGAGCTACTATTGCTAACAGATCCCAGGTTTATGTCCTTTGTCAATCCCCTTTCTGGCAGACGGTCCTTTAATAGGACTCCTAAGGGATGGATATCTGAGAATATTCCTATAGTGATAACAACCGAACCTACAGATGATACCACTGTACCAGAATCAGAAGACCTATGAAAAGAAAGTTGTA---TGTGCCACATAAAACTCTGAATATAAAAGTTGC-------TGTTCTACTATTTTAACTACTGGCAAAGCCACTTGC----ATTTTTCATTAGTAGC-AACA-ATAGCAATTTA-GTGATTTTCCTTTTCTGACATTCAATTTCAATCT chr4 - 94230402 37906397 37906396 37906830 56323573 56323572 56324006 434 GAAAATTTTAAATAACACTTTAATTTTATTTCTCTAAAA----TCTACAGAGTTGCCACTCCCTTTGGTGGTTTTGAGAGAGCATCAAAGCTGGTTAAATTCAAGGTGCCAGATTATAATCTACTGATGCTAAATGATCCAAGATTCATGATTCTTGCAAATCCTCTTGCTACCAGAAGATCCTTCAATAGGACTCCTAAAGGATGGACATCTGAGAATATTCCAGTAGTGTT---CATTCAACCTTCAGATTCCAACAATGTTCCAGAAACAGAGGACCTGTGAGA--GAAGCTGCACTCTATACTGTACAAAGTTTGG------AAAGCTGCACATTCATGTATTTTTGGTCCAAATGTTACTAAAGGCTACTGAGAAGACCTTTCCTTGGCAGCTGGCACATAACGCCTGATGTGTTATCTCTTTTCTGGAATCTATTTTTCATCT ..x..x...:....x:.x..x.:x.:.:...:.:.xxx.----:.:....:........x..x.....x........:.:........::x..........:..:..x.......x.:.x.....:x......xx.....x..:..:...x:::...:x.....:...x..:x....x.:.....:..............:.......:...............x:.....x.---x.::x.....x.....xx:.x..x...x......x....:.....:...:.--:...:..:.---.:.:.:::.:...::.:x.------....:...-------...x:.x:.:x.::..x.::.:x:....x.xx:..x----.::....x..:.:...-::..-...:.:x:.x.-...x.x.::........:x..::.x...:x.... 39M4D190M3D51M2D9M3I19M6D8M7I36M4I16M1I4M1I11M1I34M 288/417 69.1% 434/94230402 0.0% 32/417 7.7% 81279519 NA +11128 chr4 + 190214555 119239759 119239758 119239909 151 AATGGCATGGGTAAAATTCTTACGGAAACCTGGTGGCAATCTTGGAAAAGTTTATCAGCCTGGAAGTATGCTATCACTAGCCCCTACCAAAGGCTTGTTAAATGAACCAGGACAAAACAGCTGCTTTCTTAATAGCGCTGTACAGGTGAGA chr4 - 94230402 37930441 37930440 37930591 56299812 56299811 56299962 151 AATGGCATGGGTGAAGTTTCTAAGAAAACCTGGGGGTAACCTTGGAAAAGTTTATCAGCCTGGAAGTATATTGTCCCTGGCCCCTACAAAAGGCTTATTAAATGAACCGGGACAGAACAGCTGCTTTCTTAACAGTGCTGTTCAGGTAAGA ............:..:..::..x.:........x..:..:.............................::.:..x..:........x........:...........:.....:.................:..:.....x.....:... 151M 129/151 85.4% 151/94230402 0.0% 0/151 0.0% 81309318 NA +7089 chr4 + 190214555 119245329 119245328 119245665 337 TTTTTTAGGTTTTATGGCAATTGGATATATTCCGACGAAGCTTGCGGGTTTTGACTGGACATGTTTGTCAGGGAGATGCCTGTATATTTTGTGCATTGAAGGTAACCTTTTAATA--GCTCTGAAAAACTACTATCAATTGTTCCTTCAAAAATTTAAGTTTGATATATTGGGTCAGTTTGTTGTAACTAAAGTTCACTGTCAGGTGATTAACAGTTTTGAAGATGAATTCTTAACAGTATGACTTATTCAGGTTTGTGTTTTCATTTTCCTCTTTTATATAAGGACAGTTAAAAATTAATATTCTAAGTAGTATAAAATTGTTAGGAACATTATCTTT chr4 - 94230402 37932841 37932840 37933142 56297261 56297260 56297562 302 TTTTGTAGGTTTTATGGCAGCTTGACATATTTCGTCGGAGTTTAAGAGGTTTAACTGGGCACGTGTGCCAGGGAGATGCGTGCATATTTTGTGCTTTGAAGGTAAATAATTAAGATTTTTCTAAGAAATCATCATGCGTTTGTCCCTGTATGCTTTAAAGAAAAAAAAAAGGGAAAATTTACTG-------AGTTC-------------TGGTAATTTT-----TATATCCTTA----------TCATTCATGTGTCTGACTAAATCAT--TCTTGCATGTAGACACAATTTGGACTTAATGTCACTTGCAACAGATGTTTGTAAGAAATATTTTCTTT ....x..............::.x..:.....:..x..:..:..:x.:.x...:.....:..:..x..:...........x..:...........x..........x:xx....x.--x:...:.:...::.::..xx:..xx...:.xx.x:x.....:xxx:.x.x.xx...xx.:...::..-------.....-------------.:::.:....-----.:x..:....----------.:.....x..x.x..x:.xx..:x.--....x:..:..::x...:..x::.x.....:.:x:xx.:.::.x.x:x....x..:..:...x..... 115M2I67M7D5M13D10M5D10M10D25M2D68M 196/300 65.3% 302/94230402 0.0% 39/300 13.0% 81312488 NA +10949 chr4 + 190214555 119248675 119248674 119248910 236 TGTGTTGTAATGAAATTACTGAAATGTCGTTAAAGCTGGCATTAAACTTACTGATTTTCTTGTCGATTCCCAGACGATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGATGATGCTGCGGAGTGCTTTGTAAGTG---TTTCTGATATTCCTTAAGAAG chr4 - 94230402 37936891 37936890 37937122 56293281 56293280 56293512 232 TGTATTTGAACAGAACTAT--AGTTGTAGACAAGGCTA--ATTAAGCTAAGTAAT---CGTATTTCTTCCTAGGCAATATTTTCACAATTTCAACACAGTCGAGAAAAAGCACTCCCATCAGATAACATGAGACATGCCCTGGCAGAAAGTTTTAAAGACGAACAGCGTTTCCAGCTTGGATTCATGGATGATGCAGCAGAATGCTTTGTGAGTACTCTTTATGACAGTCATCAAGTAG ...:..xx..:::..:..:--.:x...x.x:..:...:--.....:..x.x.:..---.x.:.:xx....:..:.:......x....:..:.......................:..x...........:..:.....:..x...........:.....:..:.....x..:..:.....x:.:...........x..:..:........:...:---...x...:.x..x.:...x.. 19M2D17M2D15M3D157M3I21M 173/229 75.5% 232/94230402 0.0% 10/229 4.4% 81311784 NA +15560 chr4 + 190214555 119256210 119256209 119256533 324 TCAACAACTCATTT---ATCTATTTTATTTTTAAATTAGGAAAATATGTTGGAGAGGATTCATTTTCACATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAGAAGTTTGCTATGACTCTGTATGAACAGGTGAGATGGCTTGATTATTATTTAGATATTGTAGTTCTGTT-TTATGATTGATAGATTAAACATATGTTTTTACCTATATAGTGTGTGTGTCGTAGCTGTGGAGCATCGTCAGATCCTCTACCTTTTACAGAATTTGTGCGGTACATTTCTACAACAGCCTTATGGTAAGAACCT chr4 - 94230402 37938448 37938447 37938772 56291631 56291630 56291955 325 TCATCAATTCAGTTTGTATTTACATTGTTTCTAT-TTAGGAAAATATCCTTGAGAGGATTCATTTTCACCTAGTGCCAAACAGCGACACAGATATGTGCACTTCAAAATCCTGTATTTCTCATCAAAAGTTTGCAATGACACTGTATGAACAGGTCAGACA--TTAATGCTTTAACAAATAATTTGGTTCCACTGTCATGAATAAATAAAAACAAAAGGGTTTTTATTTTTGTAGTGCGTATGCCGTAGTTGTGGAGCATCATCAGACCCGTTGCCTTTTACGGAATTTGTGCGTTATATTTCTACCACAGCTTTGTGGTAAGAGCTT ...x...:...x..---..:..:x..:...:..x-............x:.x..................x.........:...x..::....:.....:..:..x.....:.....:x....:..:........x.....x..............x...::--..:..xx..xxx:.:...x.x.:....:::.-.:....x.:.xx:.xx.x.x.x:x.......::.x.:.....:..:..:.....:...........:.....:..x:.:........:...........x..:........x.....:..:........:.:. 14M3I17M1D126M2D31M1I133M 242/321 75.4% 325/94230402 0.0% 7/321 2.2% 81317762 NA +8568 chr4 + 190214555 119259806 119259805 119259932 127 TTCTTTTTTTGTAGCAATGAGGTTGAAAGAATGTTGGAAAGGCATGAACGCTTTAAACCTGAAATGTTTGCAGAATTGCTACAAGCAGCAAATACAACAGATGACTATAGGAAATGTCCTGTAAGTA chr4 - 94230402 37939039 37939038 37939165 56291238 56291237 56291364 127 TTATTTTTTTACAGTAATGAGGTAGAAAGAATGATGGAGAGGCATGAGCGTCTCAAGCCAGAAATGTTTGCGGAACTGCTGCAGGCAGCAAATACTGCTGATGACTACAGAAAGTGTCCTGTAAGTA ..x.......::..:........x.........x....:........:..::.:..:..x...........:...:....:..:...........x:.x........:..:..:............. 127M 104/127 81.9% 127/94230402 0.0% 0/127 0.0% 81320767 NA +12107 chr4 + 190214555 119260490 119260489 119260665 176 TTTATGTTTTTCTGTAGAGTAACTGTGGCCAAAAAATAAAAATTCGCCGTGTTTTAATGAATTGCCCAGAGATTGTTACAATTGGTTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGAAGCTGTTGTTCGGAATCTAGCAACACATCTTTATCTTCCTGGGGTATCTTATCTA chr4 - 94230402 37940026 37940025 37940201 56290202 56290201 56290377 176 TTTTTCCCTTTCTCTAGAGTAACTGTGGTCAAAAAATAAAAATTCGTCGTGTTCTTATGAATTGCCCTGAGATTGTGACAATTGGTTTAGTCTGGGACTCAGAACACTCTGATCTGACAGAAGAGGTTATGCGGAACCTGGCAACGCAACTTTATCTTCCTGGGGTATCTGACCTA ...x.x::.....x..............:.................:......:.x...........x........x.......................x..:..:.....::....x....xx...:.x.....:..:.....:..x.....................x.:... 176M 149/176 84.7% 176/94230402 0.0% 0/176 0.0% 81320464 NA +12127 chr4 + 190214555 119261706 119261705 119261947 242 TTTAAACAGCTTTTTTATAGAGTTACTGATGAAAATGCCAAAAATAGTGAACTTAACCTTGTTGGTATGATCTGCTACACCAGCCAACATTATTGTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGGTATTTTTTGATGATGCAAATGTGAAAGAGGTAAGTGACACTTTCTTTAATTGAAATAATTACTGTGAT-TTTTACTTTTTGTTAATAAATGATATATTGATATTAATATTCAA chr4 - 94230402 37940733 37940732 37940970 56289433 56289432 56289670 238 TTTCTACAGCTCTTCTATAGGGTTACAGATGAAAATGCCAAAAATAGTGAACTTTTTCTTGTGGGAATGATTTGCTACACAAGCCGACACTACTGTGCCTTTGCTTTTCATACCAAGAGTTGCAAATGGGTGCTGTTTGATGATGCTAATGTGAAAGAGGTAA---ATACTGTTTTTACTGCTAATAAATTCAGTGATCCTTTAGTTTTCCTGTATGCAT--TTTTCTGACACTAAGATTAAA ...xx......:..:.....:.....x...........................xx:.....x..x.....:........x....:...:..:...........x.....:.....:....x.........::.x...........x................---.:...x.:....x.xxx.....x.x.x.....-:....x....:x.xx..:x..--.x.x:...:.:...x...x.. 163M3D32M1I21M2D21M 188/237 79.3% 238/94230402 0.0% 6/237 2.5% 81320973 NA +9180 chr4 + 190214555 119267308 119267307 119267503 196 TTTTTTTAAAAGATTGGAACTAGATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCACTTTCAGCCACTACTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTCACATTACAAATCTGT---------TGCAGAAAATATGGGTAATT--CTTTCTTTTAAAAAT chr4 - 94230402 37941317 37941316 37941523 56288880 56288879 56289086 207 TTTTTTTCTTAGATTGGAACAAAATGGAAAGATGTTGTTTCCCGGTGCATTCGATGTCACTTTCAGCCGTTGTTGCTATTTTATGCTAACCCCGATGGCACAGCTGTATCTCCAGAAGATGCTCCAAAGCAGATTATCCACTGGTCTCAAAACAGAGCAACAGGAGGAAATGCAGAAGACTTGGGTAATCAGATGTATTTTAATAAT .......xxx..........x.:...............:...x::...........:...........::.::.x:.:........x.....x...........x..x...x.x..:.....x.:x.:....:.:...x:......x..xx...:.x.x::---------.......:.:x........:--x.x.x......x... 161M9I20M2I15M 148/196 75.5% 207/94230402 0.0% 11/196 5.6% 81325991 NA +8528 chr4 + 190214555 119269595 119269594 119269851 257 AAATATATCTTAACATTTTTAT-ATAGATCAATTTTTATTTTTATTGGGCAATTTGAAAAATGATCTGTATCATAGTAAGAATGATTTCTTTTACAGCTAAGTTAAGTCACATTGATCAAAGGGAAAAGATAAAAGACATTTCCAGAGAATGTGCTCTGAAAGCTATTGAACAGAAAAACTTACTTTCTTCACAAAGGAAAGATTTAGAGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGGTAA-GTT---AAGATCT chr4 - 94230402 37943380 37943379 37943616 56286787 56286786 56287023 237 AAATACTACTGTATATTTTGATCATAAATTATTTTTTAT-------------------AAGTGATCTTTGACAAA---AGAATCTATTTTTTTGCAGCTAAGTTAGCTTACAGTGATCAAAAGGACAGGCTGAAGGACATATCCAGAGAGTGTGCTCAGAAAGCTGCTGATATGAAAAACTTCTCATCTTTAC---GAAAGGATGCAGACAGAGGACCAAGAAGAGAATCTGGGAGACAAAGAGGTAACGTTTTAAAGATCT .....:xx..xx.:.....x..-...:..:.x.......-------------------..:......x.:x..x.---.....xxx..:....:...........:x.:...x........:...x.:.x.:..:.....x........:.......x.......::...xxx.........x::x....:..---.:..:...x:...x.::....x.....:...x.:x..:x....x........-...---....... 22M1I16M19D17M3D115M3D52M1I3M3I7M 174/232 75.0% 237/94230402 0.0% 30/232 12.9% 81326215 NA +31351 chr4 + 190214555 119271282 119271281 119272040 759 TTTTTTTTTTTAAGATTTGGTTGATGAAGACCTTTCACATTTCCAATCTGGATCACCTCCTGCCCCAAATGGTTTTAAACAACATGGGAATCCACATCTATATCATAGTCAAGGAAAAGGATCATATAAACATGACCGAGTTGTACCTCAGAGTCGAGCTTCTGCACAAATAATAAGTTCAAGTAAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACTGGCAAAGTTAAGAGTGACAATGGCACTGGATATGACACAGACAGCAGCCAAGATTCTAGGGATAGAGGAAACAGCTGTGATAGCAGCAGTAAAAGCCGGAACCGAGGTTGGAAACCTATGAGAGAAACATTAAATGTTGATAGTATTTTTAGTGAAAGTGAAAAAAGACAGCATAGTCCAAGACATAAACCAAATATCAGTAATAAGCCTAAATCTAGCAAGGATCCGAGTTTTAGTAATTGGCCAAAAGAGAATCCAAAGCAAAAAGGTTTAATGACCATATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAATCTAATGGAAAAGGA---GCAGAGAAAAATAAAGGCCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGATATGAAAGCAGTGATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGTTATCGATGGAAATGGTACAGTAATGGATATCAGTGGTGTTAAAGAAACAGTATGCTTCAGGTAATG chr4 - 94230402 37943843 37943842 37944595 56285808 56285807 56286560 753 TTCCTTCTTATTAGATTTAATTGGGGAAGATCGTTCCAATTTTAAGACAGGGTCTCCTCCGGTTGGAAATGGACTTAGACAATGCACGGATCAGCGCATATACAGCAGCCAGGGAAGAGGGCCTTATAAACATGACAGTGTACCTCCCCAAACAAAACTTCCTGTACAGGTGCTTGGATCAAATAAAACAGAAACTTTTCCTGCTGGTGAGAAACCAATGCTTAGGACCCGAAATGATGGTGTCACTGGCTATGATACGGATAGCAGTCAAGACTCTAGGGATAAAGGAAGTATC------ATCAGTAGCAGAAGCAGAAATAGAGGCTGGAAACCCATGCGAGAGACACTAAATGTAGACAGCATTTTCAGCGAAACGGAGAAGAAACAACATAGCCCAAAGCACAAGGCAAACCTGAACAGTAAATCTAAGCATGAAAAAGAGCGAAGCTTTAACCATTGGCCAAAAGAGAACCAAATCCAGAAAGGTTTAATGACTATATATGAAGATGAAACAAAACAAGATACGGGAAGTAGAAGTTCTTTGGATTCAGAGGGGAAAGGGAATGCTGAAAAAAGCAAAGGATTTGCCGAGAGAAAAATCCATGGTGATAACTGGCAAATTCAGAGGACAGAATCTGGTTATGAGAGCAGTGATCATATCAGCAATGGATCAGCAAATCCAGACTCGCCTGTTATTGAAGGAATCAATCCAGCA---GATGTCAAGAATATTAAAGAAGGTGCTTCCTGCAGGTAATG ..::..:..x.x......::...:x.....:.x...xx....:x.:x.x..:..x.....x.::xx......x:...:....::::x.:...x:.::x....:x::..:..:....:...::.x............x.x..xx:x..:..:.xxx:.x:.:...:...::.:x.x:.x....:....x.xx.:.:.:..x..x.x..x......x:..:xxx:.:::::x::.:...:::..x......x.....:..:..:.....:.....:..........:.....::.x.------.x...:..:.:....x.:..:x....:........:...x....:...:.......x..:..:.....:..:....xx..:..:.:...:.....:....::..:..:x....:x.x.::.:...::....::x.::x..:..x.x:..:....::x................:.x..xx..:..............:................::..:..:..x.::.....:........::.x..x..x:.x..:.....:---..x..:....::.....x:...:x...:.x...:.x...........:.....:..x..:.....x..:.....x.....:...........:.....:.....x..x:.x...:::.....:........:..x....x:::.x...:.---...:...:x::.:........:xx.:x.x..x......... 295M6D264M3I150M3D41M 511/750 68.1% 753/94230402 0.0% 12/750 1.6% 81327439 NA +4173 chr4 + 190214555 119281403 119281402 119281610 208 TGTGGGGATTATTTTTCAGTTTGCAGACAAAGAATGTGATTAAATGTTAAATTATTTTGTTTTCATCAA---ATGGTATACTATCAGAAGGAAACACTTATATTAAGGAAATAACCTTCCTTTCCCATATTAGAATGTCTCGCCTGATAAAATCTGATAAGT---TTGGTAACCAAGTATTACAGGAAACAGTAAAGGGTTGGCCAGAAATCAT chr4 - 94230402 37946286 37946285 37946483 56283920 56283919 56284117 198 TGTGAGGGTTTTTTTTTTTTTT-------AAGTCTG-GATAGGCTGTGATATGATTTCTTTTCCTACAAGATATGAGGCAAAATCAGGAAGAAACACTTGTAATAAGGAAATCTGCTTCCTTTTACATACTAACATGT-----CTACTGGATTTTTATAAATCCCTTGGCATATAAATGTTAGAGGTCACCATGA--GGCCAGCCA-AAATCAT ....:..:..x.....:xx...-------...xx..-...x::x...x.x..x....:x...:.xx...---...:x::.xx.....:.:.........:..x.........xxx........:x....:..:x....-----..:x.::.x.:.x....:.---....:.xx:..:.:...x...xx..x:.:.--..:::....-....... 22M7D7M1D32M3I66M5D19M3I30M2D9M1D7M 131/192 68.2% 198/94230402 0.0% 22/192 11.5% 81335117 NA +7576 chr4 + 190214555 119286400 119286399 119286605 206 ACTTAGATTTGCGAATAACCTGGAGCCAAAATTCCTCACAAAGAC-------------------ACATGGATGTCTATGTCAGCAGAAGAGAAAAATAACATATCTATTTTTAAGTTAGTTGGAATTCTGAAGT--CAAACCAC-------------------TTGGTTGAATGCCTGCCACAGTGATATTAAAATTTCAAACATGCTCATAAAACCTATGCTGCCTCCTGCTGCCCATTGTGTGA chr4 - 94230402 37948728 37948727 37948964 56281439 56281438 56281675 237 ATCTGGTTTTGCAAAGAACCTAGAGCCAAAATTCCCAATAGAGTCTAAACCGAGTTTTAACCTTGCATGGATCTC-ATGTCAGCAGAAGAGAAAA-TAACACATCTATTTTTAAGTTAGCTGGAATTCTGAAGGCACAAATCACCTGGTATCACTGAGCAGTTTTGGTTGAACGTGTGCCATGGTCACTCTAAAGAAC--AACTTACT-----AACCTTTGCTGCCTCCTCCTGACAGATTTATGA .::.:.x.....:..x.....:.............:x.:.:..x.-------------------:.......x..-...................-.....:.................:.............x--....:...-------------------.........:.:x.....::..x.:x:....:xx:--...x.:..-----.....x...........x...x.x:x.x.:... 45M19I11M1D19M1D38M2I8M19I35M2D8M5D33M 156/197 79.2% 237/94230402 0.0% 49/197 24.9% 81337672 NA +16895 chr4 + 190214555 119292277 119292276 119293305 1029 TCCCCTAGTTTCATATATTTGCATAGGG--TGTTCTAGCTTTGTTT--TTATTTTCATATTTCAGATCACATGTACATGAAGACAATGGAAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGAAACTTGAAAAACCGAATGAATGCAAATTTTCTGAGTGGCTTAATATAGAAAATTCTGAGAGAACAGGTTTGCCT---TTTCACGTTGATA----ACTCTGCTTCTG----------------GGAAGAGAG----TGAACAGTAATG---AACCATCTTC---ATTATGGTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCAGCAACAAAATATCATGGATCAATGTTACTTTGAGAACTCTCTATCCACAGAATGTATAATTCGGTCAGCCAGCAGATCTGATGGGTG--------TCAGATGCCAAAACTTTTTTGCCAGAATCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTCAGAGAAAAGCGAATCTACACCTGATGTCAAACTTACAGAGGTGTTTAAAGCTACCTCTCATCTTCCGAAGCACAGTTTAA---------GTACAGCTTCAGAACCAAGTTTAGAAGTGAGTACACATATGAATGATGAAAGACATAAAGAAACATTTCAAGTGAGAGAATGTTTTGGCAACACACCAAACTGTCCATCCAGCTCCTCAACTAACGATTTTCAGGCAAACTCAGGTGCCATT------GATGCATTTTGCCAACCAGAACTAGACTCTATTTCTACCTGTCCAAATGAGACAGTTTCATTAACTACCTATTTTTCAGTTGATAGCTGCATGACGGATACATATAGATTGAAATACCATCAGAGGCCCAAGCTCTCTTTTCCAGAGAGCAGTGGCTTTTGTA---ATAATTCACTATCTTAGAGTGAAAAAGGACTAGAC-CTGTGTTACATAATAATCTTGGTTCAAGCTGCCCT---TCTGAACAAAGATATAAACCTA---------GCATACATTGTAATAGATA chr4 - 94230402 37952071 37952070 37953116 56277287 56277286 56278332 1046 TCACTTTGTCTTTTATGTTTATATAGGTACTGACATCCTCTTGTTTGCTCGTTTGTTTGTTTTAGAGCTGAAATGCCTGAGATCAATAGGAAATTTTTCCCATCATCAACTCTACA----------GCCAATTGTTAAAGAGATCGTG-----AAATCAGAC-AGTAGGAAC-----AAGGCAAATGAACAGAATTCTTCAGAGTGGCTTAATCCGGACAGAGTTGAGACAATGAATGTGTCAGCATATTGTGCTGATGGTGTACCCCACCCTTATACAGAAAACAACTGTGGAAGGAAGCCCATCAACAGTGACTTCCACCCTTCTTCCCAACCGCAGCCTCATCATGCAAGAACATTTGGTCCCAAGGTGGGGTTTTCACCTTTCGT---GCCACAGAATCCCTCAGA---AAGGCCCACTGTGCTGCCTCCGCCC------TGTGAGAAT--GCCGGACGCCAGCTCCGAAGGGTGGATGCTCTTTGGGTGCCAGAAGCAGTTTACCAGAATCTTCCTCCCCCTCTACCTCCAAAGAAATATGCTCTGAATATTTTGCCAGGATCAGAAACTAAC---TCAGTAGCTGATGTAAAATCAACAGAAGCATT---------------------GCAGAATAATTTAAGACAAACAGGTGCACCTTTTAAGTCTGCCTCAGAAGCAAATGTATTTACAAGTGAACAAAGGCTTAAAGAGTCGTTTCAAGGGAATGAGATGTTTGTTCATAAACCAGATTCTCCACCTAGCTTACCAGTTAATGACTTTTGGTTGATGTCTGAGAACTTCTTAAAGAAAGGATCTCGTCATACAGGACCAAATGCTGGTTATGTGGATGGAAATGATAGTGTATCCCTAACAACTTATTTTTCAGTAGACAGTTGTATGACTGACACATACAGGATGAAATATCATCAGAGACCCAAGCTTTATTTTACAGATAGTGGAAGCTTTCACAAAGAAAAGCATCTAACACCAGCTGGAGTAGAACTGAATGCTACATACCATACTACTCTTGAGCCCAGGCATCCCACATCCGAGCAAAGGTACAAAGCAAATGTAGAAGGCTTACACTGTAGTAGATA ..x.:.x..:.:x...:...::.....x--..x:x.xx::......--.::...x:x.:...:...x.xx.x:.:.x...::x....:.:..:..x..:..x.....x.x......----------.x.x..x:.xx......x.:.:-----x.:.....:-.::..:...-----..:x.:......::x..x.:...x............x::..x.:xx:.....x..::::.x..:.x---.x.:::.:....:----..:.::.:::.:----------------.....::..----.x......:.:x---.x..x.....---.:::::.:..:xx..:x:......xx....x::x...x::.::x:.x.x...:..:.---..x...:...x:.x::..---.x.x:x.x:..x.xxx:...:::..------...:x:.x.--.:.:.x.:x...x..:..x.....--------.::.:.....:..x:xx...:.........x..x......:.:..x...............x.:.x:.x.x.....x::.....:.xx.:.---..x::.x.......x...::x.....:.::..---------------------.x..x.:.:.....---------..:..x...:x:.::.x:x:.:.....::.:.::.:x..::.:...xx....:.x......:x.:.......x..:x..:xxx....x:x.:.x....:.:.x....:.:....:x:..::...:..:...::.x::.xx..x.:x:x.x.:------:.x.x..:.:.:..xx...:..:.:.:x..:x..x.::xx:.xx......x.xx..x..x:....x..:...........x..:..:..:.....x..:.....:..:x.......:........:........:.x....x....x..::.x:.....:::.---.x..x:xx...x.x:x::x..:.:x..:...::.:-..:::.xx....x..x.....:x:.x..x:::..:---..:..:.....:..:...x.x.---------..x....:....:...... 28M2I16M2I68M10D22M5D9M1D9M5D66M3I13M4I12M16I9M4I12M3I10M3I57M3D18M3D25M6D9M2D24M8I91M3D32M21D14M9I152M6I163M3I35M1I35M3I22M9I19M 599/970 61.8% 1046/94230402 0.0% 135/970 13.9% 81340206 NA +4353 chr4 + 190214555 119318865 119318864 119319094 230 TTAAATCCTAATTAG-CTTTTACTTCTTTTGCTTTGGCATGAA----TGGAAATATACCAATGTTTATAAAAGGACCAATCAATCAGTAACCTTATACTTGATGGGGTGAAAT------AAATAGT-TCTGGTACAATATAGATCTTCTGTCCAATTTGTATTTTGG----ACTG-TGCGCCAAGAATAATGCTCAATCCTTTTTAAAGATCCTTTTGGCTTCTACTCCTTCATATACATAAGTCTG chr4 - 94230402 37963378 37963377 37963623 56266780 56266779 56267025 246 TCAAATTTTAACTGGATTTTTTTTTTTTTTAATTCAAGGTAAAGCACTAAATGTAAACTTGTGTTTTCATTAGGGCTAAATAATCA-CAACTTAGGAGGTGCTGTGAGGAGATTAAAAAAAATAGTATATGTAGAAAAATTGTCTTTTTTTTTTAATAGGATTTTGATTCCAGTGCTGTTCTGGGTAAAGTATTTACTCCTTTTTGAAGATTCTCTTGGCTTCAACTCCTTCGTACACGTAGGTCTG .:....::...:.:.-:....x:..:....:x..:::x:.:..----.::.x:..x..:x:.....x:.xx...:.:..x:.....-:...:.x:x.xx..x..x.:x..:..------.......-.x..xx:x..x..x.x::..:.x.::x.x.x.x......:----.x..-..:x.:::.x.x.:.::.:.x........:.....:..:........x........:..:..:..:..... 15M1I27M4I39M1D26M6I7M1I40M4I4M1I71M 144/229 62.9% 246/94230402 0.0% 18/229 7.9% 81355487 NA +5865 chr4 + 190214555 119322016 119322015 119322221 206 CAAAGAAATAAAGTCTTTACCCATTTTTTCCATGAACTTGTCATAGTTTTCACTCCGGTCTACCTTCCAAGTGCTGTCAAACGCCATGATTTCAGTTG-AGTCAGCCTCTAGGCAGCTAGAGATTCAGGTCTGTCCTTGGGCGAGAATTTATTATATTTCTTATCTTAGAACCAACTTCATACTGTGATGTGGAAGCTTAAAGTTCA chr4 - 94230402 37965931 37965930 37966126 56264277 56264276 56264472 196 CAAAAAAGTAAGGC--TTACCCATTGCTTCCATGAATTTTTCATAGTTCTCATTTTTCTCTATTTTCCAAGTACCGTTAAATGCCATCTTTCTGTCTGTAGGCAGACTTCTGGTAAGTAG-----CAGAGCTTTGC---AAAGAGAATTTATGAACTGGCTTATCAGGAAAGCAA-TTTACATGATGATGTGGCTGGCTAAAGCTCA ....:..:...:.:--.........x:.........:..x........:...:.::xx....::........:.:..:...:.....xx..:::x:..-..x...x..::x..:.:x...-----...:x..x.x.---::x..........x.xx.xx......xx::..x...-..:.:.:x:........xx.x:.....:... 14M2D82M1I21M5D11M3D36M1D31M 133/195 68.2% 196/94230402 0.0% 12/195 6.2% 81356085 NA +3108 chr4 + 190214555 119357285 119357284 119357346 62 GTTTCCTAGCTTTTTGTGTGTTTGTTGCTGCTGTTGTTTTTTTGTTTGTTTAGGTTTTTAAA chr4 - 94230402 72653524 72653523 72653585 21576818 21576817 21576879 62 GTTTTGTGGCTTTTTGATTTTTTTTAACTATTGTAGTTTTTTTGTTTGTTTATGTCTTAAAA ....:x.:........xx.x...x.x:..::...x.................x..:..x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 46703761 NA +3905 chr4 + 190214555 119374032 119374031 119374114 83 CTGCAGCCTCCGCCTCCTGGGTTCAAGCGATTCTCCTTCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGCGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCACTGTG ..:.....:xx:x..:...........:.x...x.xxxx........:............:.:....x..--.......::.. 70M2D11M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 101176906 89037649 +3057 chr4 + 190214555 119377409 119377408 119377465 57 ATTTATGGGTTTTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTGTTTT chr4 - 94230402 44858304 44858303 44858360 49372043 49372042 49372099 57 ACTTATTGGGTTTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTT .:....x..x....x..x.........:..:....x....x.x........xx.... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 74519105 NA +3106 chr4 + 190214555 119377413 119377412 119377471 59 ATGGGTTTTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTT chr4 - 94230402 35858835 35858834 35858893 58371510 58371509 58371568 59 ATTGGATTTTTTTGTTGTTGTGGTGGTGGTTTTATTTGGTTTTGTTTTCTCCTTCTTTT ..x..x....x..........x..x..x.....:...x..........x.::.x:.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 83518578 NA +3324 chr4 + 190214555 119379927 119379926 119380027 101 TCATATATATATATATACATACACACACACAC------------ACGTACGTATA--TACACATGTATATATGTACACACATGCATATACATATATGTCTACATACGTATATGTA chr4 - 94230402 73121099 73121098 73121213 21109190 21109189 21109304 115 TCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:.:.::..::....x........:.:....------------..:........--.....:x......:..x::...:..:x...::.x:.:.x:xx:...:.:.....x.:. 32M12I11M2I58M 68/101 67.3% 115/94230402 0.0% 14/101 13.9% 46258828 NA +3299 chr4 + 190214555 119380016 119380015 119380103 88 TACGTATATGTATGCGTGTATATATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAACATTTTC chr4 - 94230402 19704277 19704276 19704358 74526045 74526044 74526126 82 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTT------TTTCAATCTACAATATTTTC ..x:..:..:...:...:.....x.........x::..............x:.x.xx....x------.x.xx..x..:..:...... 62M6D20M 60/82 73.2% 82/94230402 0.0% 6/82 7.3% 99675739 90538816 +3082 chr4 + 190214555 119380048 119380047 119380096 49 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAA chr4 - 94230402 27486725 27486724 27486773 66743630 66743629 66743678 49 TGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAA ..................:x..x...x.....x..:...x...x..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 91893323 NA +3073 chr4 + 190214555 119380064 119380063 119380109 46 TGTGTGTGTGTGTGTATATATATATATATATAACATTTTCTTTATC chr4 - 94230402 63396167 63396166 63396212 30834191 30834190 30834236 46 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATACC ..............................xx....x..x.x..:. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 55983897 NA +3697 chr4 + 190214555 119415629 119415628 119415700 72 CTGCAACCTCCACCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.::.:........x...x.xx.x.........:...........:.:....x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 101218503 88996052 +3150 chr4 + 190214555 119451777 119451776 119451844 68 AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAACAGAAACAGAAAAAGAAAAAAGAATTAGAA chr4 - 94230402 88307437 88307436 88307504 5922899 5922898 5922966 68 AAAAGGCAGTAGAAAAACAAGAAGAGAAGAAAACAGAACAGTCAAAGAAAAAGAACAAAGTATTAAGA ....::x.:x.:.....x..:....:..:....x.:.....xx.x..........x....x....::. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 31144340 NA +3682 chr4 + 190214555 119481632 119481631 119481719 88 ATATTTCAAAAACCTCA---TAAAATCTATTTTATCATGTATATTATTTGCTTACCTAAGAGTGTACTGGAC--AGAATTTAAATTTTTCTTG chr4 - 94230402 20552686 20552685 20552778 73677625 73677624 73677717 93 ATCTTTCTAGAAACTCAATGCAAAATTTCTTTTATCATGTTTATTATTTGCCTACCAAGGAATTAATTGGACTGAGAACTGAAATAGCCCTTG ..x....x.:..x....---:.....:.x...........x..........:....x.:..:.xx.:.....--....:.x....xx::.... 17M3I52M2I19M 67/88 76.1% 93/94230402 0.0% 5/88 5.7% 98928946 91285609 +13060 chr4 + 190214555 119498412 119498411 119498813 402 ATACAAAAAATATGTAATAGTCCTCTAAAAACATTCATGCTATACTCTCAAAAGTTGTGCAAAAATAAAAATACAGCAGTGGCAAAG-TATATACCAAATACAGACACTATACAGACAGTGTGTAAGAAACTAGGCATATTGCAGAACACACCATCTCTGTAAACTTCAACTCTGCA----TGAAATAGGCCACTCAGTTCCGCTTGGCCTGGCCGCTTTCCCCATTAATCAGCATCTTCTCCTGCTGTTCTGCAAGGGCCTGCCATTTCTGCCTGTTCTTTCTGCAGCCATCTAGCAAAGGGAAACAGTCCTCTGACACGTGGGTCAGGGCCTAAAGAGAA----AAAAGAAAGCAAACAGCTAGAGAGAAGCCAGGAAATAAGTCCTCTCCCACAGGCCTGTTACAAAG chr4 - 94230402 37979245 37979244 37979640 56250763 56250762 56251158 396 ATAAAAGAAATATAAGATCTTGGCATATACACAGTCATGCTATATATTGAAA---TGTGGAAAAATAA---TACAGCAGTGGCAAAAACATAATCCAAATCCATACAGTGTTTAG-TAGAATGCAGTACTCC---CCTATTAC----TACGTCTTCTATGTGGACTTAAGCT-TGTGGTTTTTAAATTGGCATCTCAGTTCCGTTTGGCTTGATTGCTTTCTCCATTAATCAGATTCTTCTCTTGTTGTTCAGCTAAGGACTGCCATTTCTGCCTGTTTTTTCTACAGCCATCCAGTAAAGGGTAGCAGGCCTCTGATACATGTGTTAGGGCCTGAAATAAATTGTAAAACACGTAAAACAGTTTATATGTAACAACAAAATAAGTGTTCTTAAAAATGAATATTAAAGAG ...x..:......:x:..xx.xx:x..x.x...x..........:x:.x...---....x........---...............:-:...xx......x..x...x.:.x:..-:..x:..:.:x.xx.:---.x....:.----:..::.x...x...::....x.:..-..::----.x....x...xx..........:.....:..:::......:...........xx.......:..:.....x..x.:..x..................:.....:........:..:......x.:...x.......:..:..x..:.......:..:x:..----....x.x:xx......:.x:x:x.x.:.x.x:........x:...:xx.x.x.xx.:...x.:.. 52M3D13M3D16M1I27M1D16M3D8M4D25M1D4M4I161M4I65M 275/387 71.1% 396/94230402 0.0% 24/387 6.2% 81519167 NA +7714 chr4 + 190214555 119501166 119501165 119501295 130 ATACCTCATACAGTTGCAAGCAGATGGCATCTATGAACCCAACTTGCATACTTGGGATTTTGTTTTTCTTCTCCCTGTTCATTAGATCCTGAAAATACAAATACAGACCAGACACACAGATGTGCATTTA chr4 - 94230402 37982926 37982925 37983053 56247350 56247349 56247477 128 ATACCTCATACAGCTGCAAGCAAACAGCATCAATGAATCCAACCTGCATGCTTGGAATTTTGTTTTTCTTCTCTCTGTTCATTAGATCCTGCAAATAAATAAATAAGCTCAATGTTTAAA--TGCATTTA .............:........:.::.....x.....:.....:.....:.....:.................:.................x.....x.x.x.:.::.:x:.:::x:.:.--........ 120M2D8M 102/128 79.7% 128/94230402 0.0% 2/128 1.6% 81518240 NA +6592 chr4 + 190214555 119502456 119502455 119502666 211 AAGTTTTAAAAAATAAAATGAGAAATTGTGGTCCTAAGGAA------AGATCCCATAGAGCCATAAAAAGGAGTCTACAATTAAAAAAAAAACAATT-TGAATAATTCCTACCAACAAGGTTTCATACTTACAGTGGGTTCTATGTTGAGTTCTTTTCTCTCTCTGTCTCCTTGATCAAAAAATTCAGTTGCTACAAGTTCTGCTATCTGAAATAAAT chr4 - 94230402 37983411 37983410 37983610 56246793 56246792 56246992 200 AGATTCTGATCACTGAAAGAAGAGCTGGCTTTTGAAAGGAATGTATTAGGTTCCATAAAGCTGTTTATGGAAGCC----ATTCTAAAAGAGATGATTCTGCATGATTCCTC--------------TACTTACTGTTGGTTCTATGTTGAGTTCCTTCCGCTCTTTATCTCCCTGATCAAAGAACTCAGTAGCTACAAGCTCAGCAATCTGTAAGAGAT .::..:.:.xx.x.:...x:...:x.x.:xx.:xx......------..:.:.....:...::.xx.x:.:..:.----...xx....:.:.::...-..x..:......x--------------.......x..x.................:..:.x....:.:.....:........:..:.....x........:..x..x.....x..x.:.. 41M6I28M4D18M1I13M14D93M 137/193 71.0% 200/94230402 0.0% 25/193 13.0% 81519045 NA +5215 chr4 + 190214555 119504530 119504529 119504725 196 ACATACCCGTTGTTGAATAGGCCAGGGTTTTGTAATTGCAGAAAGATCACAAGCTGTCATCAGCATTGCCCTGTTATGGAAAAAAGAAACCCAAA--ACTCCTATTTACTTTTGTGTTATTATATACC-----------CTCAGTAAATAGTTACTAA-----------TAAAAAAAAGTTAAAACCCTCTAAACAATGGAAATGG----CAGTTTATAAAGAC chr4 - 94230402 37984221 37984220 37984444 56245959 56245958 56246182 224 ATATACCCGTTGCTGAACTGGCCACGGTTTGGTTATAGCTGATAAATCACAAGCAGTCATCAGCATTGCTCTATAGAGAAAAAAAAAAAAAAAAAAGAAATCTATGAATTATTATACTGTGAAATAACAGTCAACCAAGCCAAGCGATTAGTAAATAGAACATCCAATTTCAAGGAAAATCAAAGTCAGTAAAACAAGTGAAATTAAACCAAAGTTATAAAGAC .:..........:....:x.....x.....x..x..x..x..x.:.........x..............:..:.x:x.:......:...xxx...--.xx:....xx.:.x..:.::.:.x.x...x.-----------.:x..::.x....x.x..:-----------.x..::...:.:...::.xx:x......xx.....x:----x.:x.......... 95M2I31M11I19M11I37M4I14M 134/196 68.4% 224/94230402 0.0% 28/196 14.3% 81520309 NA +6163 chr4 + 190214555 119505803 119505802 119505938 136 GAAAATTAACTGGGTAAAAAACTTCAGCTTT--AAAGATAGTAAACCTACTTACAAAAACAACTCCTTTTGATGAGGATCTTCCAAATTGAATTGATTTTTTCTTATAAGTTCAAAAAATTCTCCTCGCCTCCTACAA chr4 - 94230402 37985721 37985720 37985858 56244545 56244544 56244682 138 GAAAATTAGACATCTAATATTAATCAGCTTTTTAATCATTCTGCATTTACTTACAAAAATAGCTCCTTCTGCATAGGATCTTCCCAATTAAACTGCTTTTTCCTTAGAAGTTCAAAAAATTCTCCTCTCCTCCTTTAA ........:x::xx...x.xxxx........--..xx..xx.:x.::............:.:......:..xxx..........x....:..:..x.....:....x....................x......x:.. 31M2I105M 102/136 75.0% 138/94230402 0.0% 2/136 1.5% 81520082 NA +7712 chr4 + 190214555 119507598 119507597 119507716 119 ACTTACTTAATGTACAGTGCTAGGTCTGTAGCTAAAATAGCTTGCTTGATTATTTTCAACGTGGTCTTATATTCTTCAATGGAGAGGCCACTGAGAATCTGATTGCCCTTTATAAAAAA chr4 - 94230402 37985933 37985932 37986051 56244352 56244351 56244470 119 ACTTACTTTATGTATAGTGCTAGGTCTGTTGCAAGGATGGCTTGTTTTATCATTTTCAGTGTTGCCTTGTACTCTTCAATTGAAAGGCTGCTGAGAATCTGGTTTCCCTTTACAAAAAA ........x.....:..............x..x.::..:.....:..x..:.......::..x.:...:..:........x..:....::...........:..x.......:...... 119M 96/119 80.7% 119/94230402 0.0% 0/119 0.0% 81521665 NA +13931 chr4 + 190214555 119510817 119510816 119511138 322 AGAGTAGAATAACCAAATTTCCCTTATTGGGCAACATGTAGACAGTTCTGGTTGTCTAGAGAAGTGAGGCTGTGAGGATCTCAAATGTTTTG-GCTTCGCCTTCCTTACCCAAAAAGGAATA-AAGTATGTGCAAGAATTTATGATGCTGGGAATAAATCCAAGAACTAAAAATAAAA--CTGAATTTATAAAGCTCTCTTTTAAAATTCCACAACAATAAATTAGGTACTTACTGGACTATTAAGAATCATCAGGCACTGGTCAAAATGATGGTGTTCCATGATTGAATGGCAGTAAAGCTGGGCAAGTGGATGTTCACTTCTGA chr4 - 94230402 37987299 37987298 37987617 56242786 56242785 56243104 319 AGAGGATGTTAGCAAAGCTTCCCTTATCAGGCAACACTTAGAAAGGTTTGGTGGTGCTCAAAAATGGAACTATGA---TTTCAAAATTGCTGCAATTTGTTTTCCTTACCCAAAAAGGAGTACAAATCATTTTAGGAATGTATAACACTGGGAATCTATCCAAAAGCTAAAAATAAAAAGCAAAATAGAGAATGGTTTCCTTTCAGTATACACAACAATGA----GGCACTTACTGGACTATTCAGGATCATCAGGCATTGATCAAAATGGTGATGCTCCATGATGGAGTGGCAATACAGTTGAGCCAGTGGATGTTCACTTCTGA ....x.x:x..:.x..::.........::.......:x....x..x.:....x..x:xx.:..:..:::..:...---.:.....xx.x:..-:x..:.::..................:..-..:.xxx.x:.:....x...:.::........xx......:.:............--.x:...xx.x..x.x.:..:...x.:xx.x.........:.----..:...............x..:...........:..:........:..:..:........x..:.....:..x..:..:..x................... 75M3D14M1I29M1I55M2I41M4D101M 233/315 74.0% 319/94230402 0.0% 11/315 3.5% 81523518 NA +3828 chr4 + 190214555 119516693 119516692 119516764 72 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.............x...x.xx.x.........:...........:......x.::. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 101319567 88894988 +6743 chr4 + 190214555 119519040 119519039 119519146 107 CTTACCGCTGTATGTAAGAGTTATTCACACCACGGTGATCCAAATCGTGGCTTAGTGCAGCAATCAGCAATGCAAGTATCTCCAGGTCAGTCAGCTTGTTCTGCATG chr4 - 94230402 37991460 37991459 37991566 56238837 56238836 56238943 107 CTTACCTTTGTATGTAAGAGTTGTTCACTCCCCTGTGATCCAAATCATGGCTTAGAGTTGCTATCAGCAAAGCCAGCGTTTCCAAGTCAGTCAGTTTGCTCTATATG ......x:..............:.....x..x.x............:........x.:x..x........x..x..::.:....:.........:...:...::... 107M 86/107 80.4% 107/94230402 0.0% 0/107 0.0% 81527580 NA +11403 chr4 + 190214555 119520897 119520896 119521072 176 CAAAATGTATTAGATATATGAATGGCTCTAAAAAGTACCTGAATTTTGCCTGCTTTTAGAGCAGCAAACATGCACTGAGCTGTATTAAAGGCATGTCTCCAATTATGATAGGCAACATTCTTCCGATAATTCTTCTTAACACTTAAAATCCATCTGCAAAGAACCTTTAGGGAATA chr4 - 94230402 37993545 37993544 37993717 56236686 56236685 56236858 173 CAGAAGGTTCTTAATGTAGTAACAGC---AAAACATACCTGAATTTTACCAGATTTTAAAGCAGCAAACATGCACTGTGCTGTATTAAAGGCATGTCTCCAATTGTGATAAGCAACATTTTTCCGATAATTTTTCTTCACGCTTAAAATCCATCTGCAGAGAACCTTTAAGAAACA ..:..x..x:.x:..:..xx..::..---....x:............:..x.x.....:..................x..........................:.....:........:...........:.....x..:.................:..........:.:..:. 26M3D147M 145/173 83.8% 173/94230402 0.0% 3/173 1.7% 81527352 NA +11739 chr4 + 190214555 119525528 119525527 119525720 193 AGGATGTTGCTGCATTCCTACCTCATGTTTCATCTGGAAGTTCTGCACAAGGTTGAGGTCAGTAAACATCCGAATTGTACACAGTGCTGTTTCCAGATCAGACAGCTCAAAGTCACTGAAGCTAAAGTCAGTAATTTTAAGGGTCTGGGCAGATGGCACCACAGCAGCCTTGGGTAAGGAAAGAAGAAAAAAA chr4 - 94230402 37995359 37995358 37995550 56234853 56234852 56235044 192 AGCATCTGACAGCATTCATACCTCATGTTTCATTTGGAAATTCTGCACCAGGTTGAGGTCTGTGAACATTCGAATTGTACACAGTGTTGTTTCAAAATCTGATAGCTCAAAATCACTGAAGTTGAAGTCAGTTAGGTTGAGAGATTGTGCAGATGGTACTACAGCAGCCTAGAG-AAGAACAAAAGAACAAAA ..x..x.x:.x......x...............:.....:........x...........x..:.....:................:......x.:...x..:........:.........:.:........x.xx..:..:.x:..x........:..:..........x.:.-...:.x.:.....x.... 174M1D18M 156/192 81.2% 192/94230402 0.0% 1/192 0.5% 81530169 NA +5189 chr4 + 190214555 119538932 119538931 119539058 127 AATTTTTAAAAAGAAAGAGGA-------TAATTACCGCTAACGACTGTAGCTCTCTTGTTTCTTCCTCTGCTGCTGAAGCATGATACGACAGAACCTACAGGGTAGGAAAAGAAGTCCAGGTTACA--CAGGAGAG chr4 - 94230402 37999825 37999824 37999956 56230447 56230446 56230578 132 AATATTTCAAAAGAAATAGGAAAAAATTCAATTACCGCTGTTACCTGCAGCTCCCTTGATTCCTCCTCAGCAGCAGAAGCATGGTATGAGAGAACCTAAAG----AGAAAAGGAGCCCTTAGTACAATCAAAAGAG ...x...x........x....-------:..........:x::x...:.....:....x...:.....x..x..x........:..:..x........x..----:......:..:..xx:x....--..::.... 21M7I73M4D21M2I8M 94/123 76.4% 132/94230402 0.0% 13/123 10.6% 81539107 NA +15577 chr4 + 190214555 119542454 119542453 119543024 571 CCCACCTCCAATGTGACCATTTGCTTGGCCATGGCTCTCTCCACTGCTTCATACATCTGCGTGTTCTGGATCCCCAAGCCACAAAAGATGACAAAAGCTTCCAGAAACTGTTCGTCATTTCGGTTGAAAGGCTTAACCTTGCCAGTATTCTCCTCCATCTTATTAACAAGTTGGCAAACCCCTATAACAATCCGAGAAATTGAGCAAATGT-----------------------------TATTGTTGATTATCA----------TAGTTTTTGTGGACTTTA---------ACAAAC-------ACACCCAAAGATTG-----------------------------------TCTTACACTTTTCTCTTAGGAATGCTTAGTATGTCGAAATAAGCAAATTAACCCCCACAAATATAAGCTAGAGAAGTAAACAGAATTT-----ATATGAGAACTAGTTTCATGTAGTTCAAAATGTACATTGCTGGCGTTCAAAAAATCCTAGAGTACTATTTTCTTCCAGACTCGGTCAC--------GAATTTTAGATCAGTTGAGTCCCCAAAGACAATTTGTCCTTTGGAAGCTAATTGGATTTTTGTACACTTGCCAAGAGAACGATTTTGATGCACATCAGAATTTTGGGTCAAACAGATCTCCTTTCCTTACT chr4 - 94230402 38001716 38001715 38002367 56228036 56228035 56228687 652 CTCACCTCTAATGTCACCATCTGTTTGGCCATTGCTCTTTCTACAGCTTCATACATCTGTGTATTCTGGATCCCCAAGCCACAAAAGATGACAAATGCTTCCAGAAACTGCTCATCATTTCTGTTGAAAGCCTTGATCTTGCCTGAGTTTTCTTCCATCTTATTCACAAGCTGGCAAACCCCTAAGTCAGGATAGAGAAATGTGAAGAAGTAATAGATTGAATTGTCGAAACATCACCTATAGTATGGAACATCAAGAGAACTACTAAGTCTAATACCATTTAGCCTACAGTACAAACCACCACTATACATAAAAGTTACACACGGCAATGCTGTAGACttttttttttttctttttttcttttttCCCCT---AAAGCTTATTAGATGGATTTCCTTGTATTAA--AGCATAAATCT----TAAAGCATAATACATTACTTAGTAGACCTAAAAATCACTTACTGGGATTTACAAAGCAAAAATGTAGGTG------AAATTCTAGGGTA--GTTTTCATCCTGACT--ATTATTATTAATAGAATTCTAGATTGATATAATCCCTAAAGACAGCTTGTCCTTTGGAGGCTAATTAAATTTTTGTAAGCATGCCAGAAGAACA---TTTATGAAAGTCAGAATACTGTTACACAGAGTTTTTGCTTCCTTATT .:......:.....x.....:..:........x.....:..:..x..............:..:................................x..............:..:.......x........x...:.:......x.x:..:..:...........x.....:.............x:x..:xx:::::..x..x.x.:.x..-----------------------------..x.:.x..x:....----------..:x.:.x:.:xxx....---------......-------.:..x:...::..:-----------------------------------.:..x.x:.....:.:.---..x.....x..x:.x..xx.xxx::x.....--xx..:....x.----..:..x.xx.x...xx.:..-----.:x.:.:..::.x..x.xx.x.x..xx...xxx.x.x..:x..:.------....:....:...--:.....x...x....--:.:.:--------.....:.....:::.xx.:....:.......::............:.......::.........x:.x.....::.....:---..x...x.x:.......x:..xxx..x.x..x.:.:x:.......:. 211M29I15M10I18M9I6M7I14M35I17M3D31M2D11M4D20M5I45M6D13M2D15M2D5M8I81M3D47M 391/549 71.2% 652/94230402 0.0% 125/549 22.8% 81540738 NA +6148 chr4 + 190214555 119552547 119552546 119552668 122 TACCTATAACTTTATTCTTCTTTCCATTTTTTATAGGTGTACAAAGCAAACTTCTAATGCACTGCTGGTTTACATTTCCTGTATTTTCAGTC---TAAACAAAAATAAAAAGAACAAAACAGCTA chr4 - 94230402 38005477 38005476 38005597 56224806 56224805 56224926 121 TACCTATCACCTTATTCTTTTTCCCATTTTTTATTGGTGTACACAGCAAACTCTTTATA---TGTTGACTTACACTTTCTGCACTGTCAGTCTGTTAAACAAACA-AAACAAAACAGAACAGTTA .......x..:........:..:...........x........x........::.x..:---..:..::.....:..:...:.:.x......---........x.-...x.:....:.....:.. 59M3D30M3I10M1D19M 95/118 80.5% 121/94230402 0.0% 7/118 5.9% 81547070 NA +9116 chr4 + 190214555 119553621 119553620 119553749 129 AAAATTGGGTTACTTACTGTCCAGGGAAATCTTTTATCCTTACTGACATCTGGGATATTAAGTGGTTCCATAGTATTTTTGACATACTGAGCATACATGTAATTGATTTTGTTTGCATCATGTTCCCTG chr4 - 94230402 38008408 38008407 38008536 56221867 56221866 56221995 129 AAAGTTATTTTACTTACTGTCCAGGGAAATCTTCTGTCTTTGCAGACATCTGGGATGTTGAGAGGCTCCATTGTATTCTTGACATACTGAGCATACATATAATTGATTTTGTTTGTATCACAGTCCCTG ...:..:xx........................:.:..:..:.x............:..:..x..:.....x.....:....................:................:....::x...... 129M 109/129 84.5% 129/94230402 0.0% 0/129 0.0% 81545213 NA +4163 chr4 + 190214555 119560290 119560289 119560370 81 TTTTACCTTGTTAATGTATCAGATGATTTTTCTAATTCCTCACACTCCATGTGAAACACACTAGAAAAAGAATCCTAAAAA chr4 - 94230402 38010462 38010461 38010542 56219861 56219860 56219941 81 TTTTACCTCTTCTGGTTTTCTGCTGAATCTTCTAATTCCTCAGCTTCCATATGAAAAACACTAGAAAATGAATCCTGAAAA ........:x.:x:xx.x..x.x...x.:.............xx:.....:.....x...........x.......:.... 81M 62/81 76.5% 81/94230402 0.0% 0/81 0.0% 81549828 NA +6349 chr4 + 190214555 119565319 119565318 119565437 119 ACCTGATTTCTCTTGTTCTCCAGCAGTGAAGTCTCATAGAGCTGAGCATTATGAAGAACAATACCACAAAATGCCAAATAAGCAGCAAAGTCCTAAAAAACAGATAATAGACAAATAAA chr4 - 94230402 38012473 38012472 38012579 56217824 56217823 56217930 107 ACCTGATTACGCCTGTTTTCAAGCAAAGATGTTTCATACAATTGAGCGTTGTGAAGAACAATTCCACAAAATGCCAAATATGCAGCAAAATCCTGA------------AGACAAATAAA ........x.x.:....:..x....:x..x..:.....x.::.....:..:...........x.................x........:....:.------------........... 96M12D11M 89/107 83.2% 107/94230402 0.0% 12/107 11.2% 81552846 NA +3031 chr4 + 190214555 119568118 119568117 119568163 46 CTTAACATTTTTCTCTCTCTCTCTCTTTTTTTTTTGCCCATATGGT chr4 - 94230402 36001281 36001280 36001326 58229077 58229076 58229122 46 CTTTACATTTTTTTCTCTCTCTTTTTTTTTTTTTCCCCCACAAGGT ...x........:.........:.:.........:x....:.x... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 83566837 NA +3071 chr4 + 190214555 119581428 119581427 119581468 41 TGTGTGTGTGCGTGTATATATATGTACATACATAATTTCTT chr4 - 94230402 61428356 61428355 61428396 32802007 32802006 32802047 41 TGTATGTGTGCGTATATACATATATACACACATAATTTTTT ...:.........:....:....:....:.........:.. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 58153072 NA +3134 chr4 + 190214555 119592448 119592447 119592498 51 ACTCTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTGTGTTCTG chr4 - 94230402 41477426 41477425 41477476 52752927 52752926 52752977 51 ATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGTGGTATG .:.....x.x...............:....:::......:......x.x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 78115022 NA +8704 chr4 + 190214555 119596518 119596517 119596682 165 CTTACCTCTTCCCTATGATTCTTAATTGGCATACAAAGAATGCTTTGTGTCTTGTAGCCTGTAATTTGGTCAACTTCTGCATTGAACCGAGGATCCTAGTAT---GGAAAAAGAAATTCAATTTAATGACTGACCTGTTCAAAGATTGATTTGATTTTTCTGATTTAT chr4 - 94230402 38022052 38022051 38022215 56208188 56208187 56208351 164 CTTACCTCTTCCCTATGATTCTTTATTGGCATACAGAGAATGCTCTGAGTCTTATACCCTGTGATCTGGTCAACTTCTGCATTGAATCTTGGATCCTGATACAAGAGAAAAATATAATTATTTGAATACTTGCCTTTTTTAAAGGTTGA----AATTGTCTGATATAT .......................x...........:........:..x.....:..x.....:..:....................:.xx.......::..:---:......x.x.x.:.x..x...:x:..x.:.x..:....:....----.x..x......x... 102M3I44M4D15M 129/161 80.1% 164/94230402 0.0% 7/161 4.3% 81574466 NA +3052 chr4 + 190214555 119599941 119599940 119599990 50 AAAATGAGAAAACTCTTTTTTAAAATATTGAAAGAAAACTACTATCAACT chr4 - 94230402 25672454 25672453 25672503 68557900 68557899 68557949 50 AAAATGAGATAACTCATTTTTAAACTGCTGAAAGAAGACTATTGCCTACT .........x.....x........x.::........:....:.::.x... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 93927487 NA +35555 chr4 + 190214555 119606703 119606702 119607310 608 GTTTACCTCATATGCATCTTTGATGTTCAAGGGCTCACCAAGCGCTGCCACATGTCCCACAATGCCTTTGTTCCATTCTAAGCGGATACAGTTATTTGAAACTTCTTCCAGTGTTGAACCTTCAGCAACATCAAAGAGGCGGCTGATAAGAAACTTGTCATTGGAGCTGTCTTCACAGACAAGGAACAGGGAATAGCGGTCAGCAGATATCAGTCCATGGATATGCAAGAAAATTTTGTGACATAAGGCTGTGACATCCAAATGACTAGAAATATCCTTCACTAATTCCAAGAGTCTTGAGCACTGGTCCCCTTCATCATGATCAAACCTTGGAGGGGTTAGAGGCATCTGTTCCTTCTTTTCTGAGTCAGAGAGGAAGCTCACAGTTCCCTCAGAATCCTTGACAACAATGGGTCTAAGAGGCCGGTCAAATTCAGAGGCAGAGATTTTCCTGGTTGGTGTTCCAGGGGCACTGTTATCTGCACGAGGACTCTGCTGCAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTGATACCTTCCTTGCACACAGGGATGGTGTGAACTCTCTCAGCAAACCATGCATTGACCATTTCTCTGCAGAACAGAA chr4 - 94230402 38023577 38023576 38024178 56206225 56206224 56206826 602 GTTTACCTCATACGCATTCTTGATGTTCAGAGGCTGGCCTATAGCAGCTACGTGGCCCACGATGCCCTTGTTCCACTCCAGGCGAATGCAGTTATTTGAAGCTTCTTCTAGGGTGGAACCTTCAGCCACATCAAACAGCCTGCTTACAAGAAACTTCTCGTTAGAGCTATCCTCACAGACCAAGAAGAGGGAATAGCGATCAGCAGCTATAAGCTCATGGATATGCAGGAAAATTTTATGGCAAAGTGCTGTGACATCCAAATGACTAGAAATGTCTTTCACAAGTTCTAAAAGCCTTGAGCACCGATCCCCTGCACTGGTCCCAGTCCTTGGAGATTGCAGAGGCATCTGTTCCTTCTTTTCAGAGCCAGAGAGGAAGCTTACTGCTCCTACTGAGTCCTTGACAAAAATCGGCCTTAAGGGTCTGTCAAATTCTGAAGCAGAGATTTTCCTTGCTGGTGTTCCAGAGTTGGTGTTCTCAGAGCAGGCAAGCTGCT------GACAAGCACAGGATTCACTCTGAGACTTGGTCCCCTCCTTGCAGACAGGGATGGTATGAACTCTCTCAGCAAACCATGCATTAACCATTTCTCTGTGAAACAAAA ............:....::..........::....x:..x.xx..x..:..:..x.....:.....:........:..:.:...:..:............:.......:..x..x...........x........x..x.x...x.:.........x..:..:.....:..:........x.:...x...........:.......x...x..::............:.........:..:..x.:x..........................:..:.....x.:...:..:..:.........:.:......x..:::xxx:..:x........:xxx:.......................x...:.............:..x.:...:x.x..:..........x...x..:..x.::..:.x.........x..:..............x.:...........:.x::x....x..x.x:.::.x.xx.....------......x:..:.....:x.x..:xx::..:.x..:........x...........:..........................:............:::....:.. 497M6D105M 472/602 78.4% 602/94230402 0.0% 6/602 1.0% 81583126 NA +8082 chr4 + 190214555 119628447 119628446 119629072 626 AGGGGTGAACGAAGGGC-ACAATTCAACAGGGGAGAGAAATCAGCCCCGGGTCTTCCGTGGG-TCCTCTTCTTACCTGGTGGCTTTTCTAACAAAGTATGAGAAGGTAAAGTCCCAGTGATCGTCCAGCCATGCTTCGACCGAGTCCTGATCC---------------CTCTGCTGCTGCTTCTGCTGCTGGGGCTGCTGCTGCTGTCGCTGCTGCCCGAAGCTGGGGCCG--GCCCGCTCCATGGTTGGCACCGCGCGCCTCGGAGGCTCTCTGGTACTGCTTTTCCACCCCAGCT----GGGGTCCGTCCCTCAGAAGAACAGGACTCGGCCTCGAGACCCTCCCCCTTCGTCCTGCTCCAGTCGGGCCGGCTTTCGACAAAGCGGCCGGAGCGCCAGGCCAGCCTCCTGCCCCGCCCCGCCCCGCGCGGTTCTACGGGCGCCCAGGTGTGGTGGGCGGGGCCAGGCGCAGCTGCTGCGCCCCCCCCA----CCCGGGGTCCGGCAGTG-TTCCGCTCTCGCAGGCTCTTCAGTCCCCTGGTTCCCAGGAGGCGGCGGCGGCGGCGGCAGCGGCAGCGCCCGG---CGAGCT--------------CTCCGGAAGCCAAGTGGCGGCG---------GCTGGAAGGAGGCCGCGCGGCCGCTGGGGTGCGCTGTGTGC chr4 - 94230402 38039389 38039388 38039997 56190406 56190405 56191014 609 AAGGGAAACCGAACGGCGACCTTTTGCCGGCAGGGAAAGATCTGACCC----TTTCCGCCGCCTCCCAGCCTTACCTTGTGGCTTTCCTGACAAAGTAGGAGCGGGTGAAGTCGCAGTGATCGTCCAGCCACGCTTCCACCGCTTCCTGCTCAGGCGAGGGGTGGCAGCTGCGCTCCATGCTCCGCT-CCGCGGCCGCT-CTGCCTCCTCTCCCGgccgccgccgccgccgccgcTTCCCCCGTGAgcggggccgggggcgcggggcTCCCTCCCTTCCTCCCTTCCTTCCCCCGCCGCCGGGGCTCCCGGCCT-------GCAGGGGCCGGCTCCCAGGTGCTCGCC-----------------CGGCTCGG-----------GCGGCAGGAAgcccgcgtccggccccggccccggccccgccgccgcACCTCAGCGCATCCCCGGCCGCGGCAGGCAG-----------CCGGCTCCACCTCCCGCAGCGCCTcggggggctgccgcgcccccgccccgcccggcTC-----------GGCTC----GGAACGGCCGCGG-AGCAGCGGCAGCAGCCCCCGGGCTCGGGCTGACGATGCCCGGCGCCGCGGAGGGCGAA-GGCGGCGTTTATGAGCGCCGGGAG--TGCTGCGGGACGGCTGGCCCGGGCGGTCCGC .:...x:.x....x...-..xx..::x.:.x:.:..:.:...x.x...----:.....:x.x-...:xx:.......x........:..:........x...x:...:.....x.................:.....x....xx.....x..x---------------..x:...x.xxx:..:...-.:.x...:...-....:x:.x..x.:.x...xx..:.xx....--..::x.:..:..:x:..x:...x.x..x:x..:xx.:...:xx.x..x.:..:.:x....x..:----...x...xxx...-------:....:x:....::.x..::x...x..-----------------...x:...-----------.....x...:xx..:x.:.x.x.:..x......x...xx..xx...:x:..x:..x::x...:.x:.:..::...:.-----------x.x...x.:..:...x..----.:.....xx.x..x.:.-::....:.:xx.x.....-----------..:..----.:::....x....-:..:..:..:.....x.....---..:...--------------.:x....:.x.:.:-.......---------..:..:..--x..:...x.:.x.....xx:.x..x..x:.. 17M1I30M4D10M1I90M15I19M1D11M1D31M2I64M4I13M7D27M17D8M11D77M11D18M4I17M1I18M11D5M4D13M1D21M3I6M14I14M1D7M9I8M2D31M 363/555 65.4% 609/94230402 0.0% 125/555 22.5% 81589058 NA +3159 chr4 + 190214555 119674924 119674923 119674976 53 TGTTCTT----TAATTTGTATCCTCTCTCTCTCTCTTTTTTTTTTGTTTTTTTTTTT chr4 - 94230402 45399571 45399570 45399627 48830776 48830775 48830832 57 TATTCTTAGCATAATGTGGATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCT .:.....----....x..x...:......................x.....::..:. 7M4I46M 45/53 84.9% 57/94230402 0.0% 4/53 7.5% 74275353 NA +3043 chr4 + 190214555 119674934 119674933 119674985 52 TTTGTATCCTCTCTCTCTCTCTTTTTTTTTTGTTTTTTTTTTTT-------TTTTGAGA chr4 - 94230402 21634160 21634159 21634218 72596185 72596184 72596243 59 TTTATGTTCTCTCTCTCTCTTTTTTTTTTTTGTATATCTTTTTTATAGCCCTCTTGAGA ...:.:.:............:............x.x.:......-------.:...... 44M7I8M 44/52 84.6% 59/94230402 0.0% 7/52 13.5% 98040774 92173781 +4042 chr4 + 190214555 119675349 119675348 119675423 75 CTATCCTACCAAAAACAAACAAATAAACAAAACACCCCTCCC------CCCCGCGAAAACAAAAAACAAACAAACAAAAAA chr4 - 94230402 35944234 35944233 35944314 58286089 58286088 58286169 81 CCAACCAACCAAAAGAAACCACAGAAACACAGCACTTCTCCCACCCCTTCCCGCCAAAACAAAAAACAAACAAACAAAAAA .:.x..x.......:x..x..x.x.....x.:...::.....------:.....x.......................... 42M6I33M 61/75 81.3% 81/94230402 0.0% 6/75 8.0% 83731115 NA +3193 chr4 + 190214555 119696326 119696325 119696392 67 CCTTAGGCAAATCATCTAATCTCTCTGTGTCTCAGTTTCTCAATCTGTAAAATAAGAGTGATAATAC chr4 - 94230402 11947223 11947222 11947286 82283117 82283116 82283180 64 CCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGA---TTATAATAC .......:x.:...::......x:.......:.......:.x..x.:.:....:.---.x....... 55M3D9M 49/64 76.6% 64/94230402 0.0% 3/64 4.7% 107749103 82465452 +3068 chr4 + 190214555 119715390 119715389 119715433 44 TCCATCTCAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAGCG chr4 - 94230402 27825830 27825829 27825873 66404530 66404529 66404573 44 TCCATCTCATAAAAAAAAAAAAAAGATGAAAAATAAAAGGAACG .........x................x:.....x.....:.:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 91889560 NA +3187 chr4 + 190214555 119716941 119716940 119716999 59 TGGGGAGGGGAGAAAAAAGAAAAAAGAAGAAAAATAATACAGGATATGGATGAAAAAAA chr4 - 94230402 50306439 50306438 50306497 43923906 43923905 43923964 59 TGAGAAAAGGAGAAGAAAGAAGAAAGAATAATAATGATAAAGAACAAAGAAGAAAAAAA ..:.:.::......:......:......x..x...:...x..:.:.x:..x........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 69410502 NA +8806 chr4 + 190214555 119735203 119735202 119735581 379 TCTGGGATTCACATTTCATATCAGAGTTGTTTAACCAGCAAAA-TGCTGAAGTG---ATTAAATATGAAACCACACAGCTGAGGCTGGAGAAAACTGTTTGTTCAGAAATGCTTCTGGAATGAGACTGCAGCTTTAGTTATTTTTGTTTGGTTGGTCAGTGATGAAATG--TGCTATACTCAGCCTGC----TAAAGTTATCCACAGAGGAAGGTTTACTTTGGTGGTTTTAAGGTATCTCCTTTCAGAATTTTGATGTGGCAGCACATCCCTTAACAGCTCATTTCCTGAGGGATACTAAACAAGAGGCAAACCTAGGAAAAAAGACAAGTTTAAGATCTCTCACCTCACTGTGAACTCTTTCCATGTTTAAACATAGAAGACACTCT chr4 - 94230402 38070366 38070365 38070741 56159662 56159661 56160037 376 TTTGTGATTCATGCCTCCTGTCAAGGCTACCAAACCAGTAAAAACACTGGAATGTAAAAAAAAAAAAAAAGCATGATTATGTATTTCAGGAAAACAATTTTCTCAAGAATGTTTCTGGAGCAGATCTTCAATGTTGGCTATTTCTAGTTCATATGTCAGTGATGGAGTGCCTACTGGCACCAACTTGTGCTTTGCAATTGTCTCAAAAGACAA---TGCTTTAGTTTGCTTAAGGTGTCTTTTTTTGG---TTTCTTGTAGCAGCAAATCCTTTAACAGCTCATTACTTAATGGAAACTAAACAA-AGCTTCTTCCAGGAAAGAAACTG---TTGATCTCTGTCACCCCACAGTGAACTCCTT---TTCTCAAACACATAACACATTCT .:..x......::::..x.:...::.:.:::x......:....-::...:.:..---.xx...x.x:...x..::xxxx..x:x:.x::......x:...x:...::....:.......:::::x..x..::x..:.:.....:.:x..x:.xx..........:.:..--.:..:xxx:..:.:..:----.:x.:..:..:xx.:..:x.:---.:....:..xxx:.......:...::...::.---...xx...:......x....:.............x.:.:.x...x.........-..x:xxx:.:......:..:x::---..:.xx...x.....:...x........:..---.x:.:.....:.x..x...:... 43M1I10M3I112M2I17M4I21M3D32M3D54M1D23M3D31M3D23M 232/366 63.4% 376/94230402 0.0% 23/366 6.3% 81664837 NA +3017 chr4 + 190214555 119735512 119735511 119735567 56 AAAAAAGACAAGTTTAAGATCTCTCACCTCACTGTGAACTCTTTCCATGTTTAAAC chr4 - 94230402 51572658 51572657 51572713 42657690 42657689 42657745 56 AAAAAAAATTACTGGAAGATTTCTCACCTCACTGCAATACCTTGCCATGTTTAAAC ......:.:x.x.xx.....:.............::.xx:...x............ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 68162854 NA +3397 chr4 + 190214555 119751262 119751261 119751335 74 CTGAAGCCTCAAACTCATAAGCTCAAGCAATTCTCTTGTCTCAGCCTCCTGAGTAGCTGTAACTACATGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:x....:x..:..:x.::.:.....::x...x.xx.x........::::........x.......:...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 101554136 88660419 +3001 chr4 + 190214555 119759214 119759213 119759276 63 AAAAAAAAAAGAAAGAAAGAAAGGAAAAGAAAAACAAAAAACAAACCGAATCAACCTAAATAC chr4 - 94230402 9497115 9497114 9497177 84733226 84733225 84733288 63 AGAAAAAAAAAAAAAGAGAAACTGAAATGACAAAAAGAAAACAGACCAATTTAACCTATACAC .:........:...::.::..xx....x..x...x.:......:...:.x.:......x.:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 110262099 79952456 +3443 chr4 + 190214555 119759789 119759788 119759886 98 AGCTCAAGTTCTTCCTCTCCTCTTTCTCCTTTTCATTCCCTT--------------TCCCTCTCTCCTTTATTTTCTTTTCTTCTCACACCCTTT---TCTTCCTCTTTTTTCAC chr4 - 94230402 32546757 32546756 32546870 61683533 61683532 61683646 114 AGCTCAGGCTGTACTTTTTCTCCA-CTCCTTGATATCTTCCTATAAAGGACATCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTTCAC ......:.:.x.x.:.:.:...:x-......xx:..:::.:.--------------.....::..:.............::..::.:..:.....---.:...:..:........ 24M1D17M14I39M3I17M 69/97 71.1% 114/94230402 0.0% 18/97 18.6% 87213032 NA +3047 chr4 + 190214555 119778721 119778720 119778771 51 ATATGTATATATATGTATATACATATACATATATATATATTGCTGTGCAGA chr4 - 94230402 12217120 12217119 12217170 82013233 82013232 82013283 51 ATATATGTATACATGCATATATGCATACATATACAAATTTTACTGTGCAAA ....:.:....:...:.....:::.........:.x..x..:.......:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 107561601 82652954 +3317 chr4 + 190214555 119803332 119803331 119803404 73 AAAAATCAAG---GGAGGGAAGGAAAGGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGA chr4 - 94230402 81022584 81022583 81022659 13207744 13207743 13207819 76 AAAAGACAAGTCAGGAGGGAAAAGACGGAAAGCTCCAAGTGTGTGCATGTGTGCATGTGTTAGAGAGAGGGAGAGA ....:x....---........:::.x..::.xx.x::x.......::......::.....x........:...... 10M3I63M 53/73 72.6% 76/94230402 0.0% 3/73 4.1% 38780748 NA +3139 chr4 + 190214555 119803368 119803367 119803407 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 100821053 89393502 +3102 chr4 + 190214555 119803370 119803369 119803405 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 38174306 NA +3353 chr4 + 190214555 119803370 119803369 119803409 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 100821055 89393500 +3316 chr4 + 190214555 119803372 119803371 119803407 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 38174308 NA +3627 chr4 + 190214555 119803372 119803371 119803413 42 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ....................................::..:. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 100821057 89393498 +3102 chr4 + 190214555 119803374 119803373 119803409 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 38174310 NA +3379 chr4 + 190214555 119803374 119803373 119803421 48 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAGCTGATT chr4 - 94230402 18982315 18982314 18982362 75248041 75248040 75248088 48 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATT ................x...................::.::::.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 100821059 89393496 +3261 chr4 + 190214555 119803376 119803375 119803415 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................:... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 100821061 89393494 +3239 chr4 + 190214555 119809815 119809814 119809885 71 TCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTC chr4 - 94230402 6793836 6793835 6793906 87436497 87436496 87436567 71 TCTGCTGCTCCTTCTTCCTTCTCATCATCCTCACCGGCCTGCCCGTGCTCTCCCTCCTCCCCCCCCACCCC ...x..x..:....:....:...x..x.....x..xx...x.:.x.x.:.::........:..:..x..:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 113015979 77198576 +3086 chr4 + 190214555 119809821 119809820 119809892 72 TCTTCTTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCT chr4 - 94230402 6793836 6793835 6793907 87436496 87436495 87436567 72 TCTGCTGCTCCTTCTTCCTTCTCATCATCCTCACCGGCCTGCCCGTGCTCTCCCTCCTCCCCCCCCACCCCT ...x..x.::.:..:....:...x..x:....x:.xx...x...x.x...::........:..:..x..:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 113015985 77198570 +3084 chr4 + 190214555 119809933 119809932 119810020 88 TTCTTCTTCTTCTTCTTCCTGTTCTTCTTCTTCCTCTTCTTCTTCCTTCTTGTTCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTGCA chr4 - 94230402 47552646 47552645 47552733 46677670 46677669 46677757 88 TTACTTTCTTTCTGATGCACATTTCTATCTCTAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTACTGCA ..x:.:.::....xx.x.x::..::.x.:::.xx.:......:x.xx.x...:...::....:.:.................x:.... 88M 56/88 63.6% 88/94230402 0.0% 0/88 0.0% 72257287 NA +3044 chr4 + 190214555 119870499 119870498 119870579 81 TCTGTCTCAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAATGATTATGAAGGTAGATTATTTTTGAAGTTTG chr4 - 94230402 56866784 56866783 56866863 37363540 37363539 37363619 80 TCTGT-TCAAAAAAAAAAAAAAAAAAGACTTAAAGAAAAGAGAAAGGATAGTTTTTTAACCAAGGTTGTTTTTTGAGCCTG .....-...........:........:.xxx..::......:....:.xx.x..x.x..xxx..:..:.....x:..::.. 5M1D75M 57/80 71.2% 80/94230402 0.0% 1/80 1.2% 63003715 NA +3166 chr4 + 190214555 119911915 119911914 119911948 34 CATTTCTTTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 - 94230402 39479568 39479567 39479601 54750802 54750801 54750835 34 CATTTCTTTCTCTCTCTCTCTTTTTTTTTTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 80432347 NA +3126 chr4 + 190214555 119911916 119911915 119911950 35 ATTTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929911 18929910 18929945 75300458 75300457 75300492 35 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT ......:............................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 100982005 89232550 +3186 chr4 + 190214555 119922506 119922505 119922580 75 ACATACATATGTGTGCACACACACACACACACACACACACATACACACATTCTCTCTGTCCCTCTCTCTCTTTCT chr4 - 94230402 90815422 90815421 90815496 3414907 3414906 3414981 75 ACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTTTCAGCCCATCTCATCCCTCCT ...:..::.xx..........:...x.....::......:.x:.....x:x:.:..x.:..x....x::.:.:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 29107084 NA +3085 chr4 + 190214555 119930623 119930622 119930674 52 CACATATTCTCTTTTTTTTTTTTTTTTTTTTTTTTACTTTT-----CAGAGTTTGAT chr4 - 94230402 30314068 30314067 30314124 63916279 63916278 63916335 57 CACATATTTTCACTTTTTTTTTTTTTTCTTTTTTCACTTTTACTTATGGTGTTTGAT ........:..x:..............:......:......-----::.x....... 41M5I11M 44/52 84.6% 57/94230402 0.0% 5/52 9.6% 89616555 NA +3003 chr4 + 190214555 119948689 119948688 119948724 36 GTTTTTTGTTTGTTTGTTTGTTTTGTTTTGGTTTTT chr4 - 94230402 60784262 60784261 60784297 33446106 33446105 33446141 36 GTTTTTTGTTTGTTTGTTTGTTTTATTTTTGTTTTT ........................:....x...... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 59164427 NA +3105 chr4 + 190214555 119948702 119948701 119948741 40 TTGTTTGTTTTGTTTTGGTTTTTTTTTTTATTTTTTTTAT chr4 - 94230402 46683140 46683139 46683179 47547224 47547223 47547263 40 TCGTTTGTTTTGTTTTGGTTTTTTTTTTTTTTCTTTTTGT .:...........................x..:.....:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 73265562 NA +4918 chr4 + 190214555 119960543 119960542 119960621 79 CTCTCTCTCTTTCTCTCTCTCTCTTGCTCTGTGTGTGTGTGTGTGCGTGTGTGTGAGAGAGAGAGACAGAGAGAGAGAA chr4 - 94230402 18982278 18982277 18982356 75248047 75248046 75248125 79 ctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..:...:.....:.:.:.......:x....x.x.x.x........:....................x......::..:. 79M 63/79 79.7% 79/94230402 0.0% 0/79 0.0% 100978265 89236290 +3041 chr4 + 190214555 119960578 119960577 119960660 83 TGTGTGTGTGCGTGTGTGTGAGAGAGAGAGACAGAG---------------AGAGAGAAAGAG---ACAAAGAGAGAGAGACAGAGAAGGTGACAGAGAGT chr4 - 94230402 81629064 81629063 81629164 12601239 12601238 12601339 101 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCTCACAAAGAGAAACTCAGAGGGACAATACTGGAGAGT ..................x............x....---------------.:.x.x...x:.---.........:.xxx.x..:..x::.:x::...... 36M15I12M3I35M 63/83 75.9% 101/94230402 0.0% 18/83 21.7% 38331514 NA +3198 chr4 + 190214555 119983587 119983586 119983647 61 AAAAACCTGTGTATGTGTGAATACATATGTGTGTATACACACACATACAAACACATGCATA chr4 - 94230402 25393255 25393254 25393315 68837088 68837087 68837148 61 AAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTA .....:x....:......:x:..::...x.....:..........:..:x....:.x.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 94590332 NA +3063 chr4 + 190214555 119985817 119985816 119985913 97 AAAAGTCTTTGATGAAACAAAAACATGAACCAAGATGATTCATGTAACTCCAAATACATTATAGTAACAATAATGTAAATGGATTAAATGACCTTAT chr4 - 94230402 17715519 17715518 17715615 76514788 76514787 76514884 97 AAATGTCTTTAATGTTAGAAAAACATAAACCCAGCTTATAAATAAAACTGCACAAACACTTTGGTACTGGCAATAAATTGAGAATAATTGACCTTGT ...x......:...xx.x........:....x..x.x..xx..:x....x..x.x...:.x.:...x::::...:x.xxx:..x...x.......:. 97M 64/97 66.0% 97/94230402 0.0% 0/97 0.0% 102270298 87944257 +3396 chr4 + 190214555 120013010 120013009 120013070 61 CATATATACATATATATATACATATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 71630145 71630144 71630205 22600198 22600197 22600258 61 CATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ......:...:.:.x..........x.x.....:::.....x..::....x:.:....... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 48382865 NA +3518 chr4 + 190214555 120013012 120013011 120013089 78 TATATACATATATATATACATATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATAAAAT chr4 - 94230402 19704277 19704276 19704354 74526049 74526048 74526126 78 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATAT ..x...........::..:....x.......:.x::..............x:.x.xx....x.x.xx..x..:..x.. 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 100308735 89905820 +3001 chr4 + 190214555 120052184 120052183 120052222 39 CTACCACCACCACCACCACACACACACATACACACACAC chr4 - 94230402 48848247 48848246 48848285 45382118 45382117 45382156 39 CTCCCCCCCCCACCACCACACACACACATACACACACGC ..x..x..x............................:. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 71203937 NA +13371 chr4 + 190214555 120060135 120060134 120061041 907 TTTTGTAGGCCACCATGCTATTTACTTTGTGGATTGTAGTAGTAAATGAACGAAGGCGGACTTCCTCAGAATTGGTAATAAACTGTGGTCCCGACTCTTCCCATTTTTCAGGTACAACCAAATCTTTGTCTGTATAAATCAGCAGATCAAATGAACCTA-----AATTGGGGATAAGATCATTG---AAGTATATTATT--TTCTAAAAGTAAAACTAATCTTGCTGCCTCTCTTCTATTTTGAACCACTCACTGCTGGAAAAGGTCATTTGGCTTGGTCTCCAATCACTAGTTAATTTATTTTGCTCAATGAACATTTATTTCAGTAAAGAAAAT--ATTGTATCTAACTTCCGTGCAATTTAGTGATTGTGTTCAAGTAACCCTTATCTTATT-----TAATAATGGTCCCAAAG-------CACAAGAATAGTGATGCCAGCATATTGTTATAATTGTTCCAGTTTATTATTAACTCTTACTATGCTTAATTTACATATTAAATTTTATCATAGGTATGTATGCATAAGAAAAAAACATTATATAGGGTTCATACTATCCATGGTTTCAGGTATTCACTGTGGGTCTCCCTGTGGAAAGGGAGACTACGATACATTACT--------TTTGCATGATAATGTTTTTC----------------------------------------CTTCAATTTATATTACATAA------ATCTGATAAATAAGACAAAATTTAATAAAGGGGT-----------------GATTACGGCAG-----TAGCTTAGTCTTTTTGCCAA----TCAATTTAATTCAACAAGAAGTTGTATAATACTTACAAGAAACTTCCAACAGTGGCAGAAATGTCACCGTAGCTGTGATCTGTCTGATCACTGAACGGATTTCATCCTGGATAGCTTTCTGAGACTTTTCTCTGGGTGCACTGTCAAAA---AAAAATCAAATCAATTAATTCATTTCAGGTCT--TAACAAATTATTTCAAACATAGT chr4 - 94230402 38147849 38147848 38148792 56081611 56081610 56082554 944 TTTTGTAAGCCACCATACTGTTTACTTTGTGGATCGTGGTAGTGAAGGAACGAAGACGAACCTCTTCTGAATTGGCAATGAATTGCGGTCCTGACTCTTCCCACTTTTCTGGCACTACCAAGTCTTTATCTGTGTAAATCAGCAAGTCAAAGGCACCTGTAAGCAAGTGGGAAAAAGTTAGCAGTACAAATGTATGAATGATACTATGATTGAAGTTAAAATGCATG---------------GAGACATACACC-------AAGGTTATCAGAATTACACT---GACACTATAGAA------------AAGGAAATGGCAGTTAAATAATGAAAACAAATACTAGTTAACATTCCTG-----TAGTCACAGTATTCATGAAAACTGTACTTCATCAGATATACTAAGTTTCATCAAGTTCCCCCCAAAACCTTTTTGGGGAAAAAGCAAGGTT-TAAGTATTTCTGGGGGACATTACCACTAGT--------ACCTTCAAATGAAGCTGCTTCAATgagagagagagagagagagagaACA--GTCCAGTATTTACATTAGCAATTCTTTTCAG--TTTATTGTGCA---------GGAAGCGG----TACAGGACAATCCTTAGAGTACTTTATCTGATGCTGCTTCTCTACTGTACATAACCGAGACTGTCTAACCAAACAGTATGCACTCAGAAATGCAGTACATGACATTTCAAGTAATAAA-AACACAAAATAGTGGAAAAGAATTTCTACTattctagtagaattctagtagaatgctagtTCAAGCTTTCTGAAAGAGGTGTGATTTCTTTCA--GAGAAGTTATG-AATACTCACAGGCAGTTTCCAGGAGAGGCAGAAAAGTTACCGTGGCAGTGATTTGTCTGATAACAGATCGAATTTCATCCTGAATGGCTTTCTGAGATTTTTCTCGGGGTGCACTGGAAAAATGGGAGAACTTAAGAAAACAACTTGTATCTACTATGCTGACAGCTTTCTTTAAACATAGT .......:........:..:..............:..:.....:..x........:..:..:..:..x.......:...:..:..:.....:...........:.....x..:..x.....:.....:.....:..........::.....x.x....:-----..x....:.x...x.x::x.---..:.:...x.x.--.x...x:.x.:..::...xx.xxx..---------------..:x..:x...:-------.....:..:x.:x..:xx..---:x.....xxx..------------..x...xxxx:.x..x.:...x.....:--..xx..x:....x.:.x..-----....x.:x..:....x.x..x.:x..::.:..:-----..x...xxx..x:x...-------..x..xxx.xx..:x.xx.:x::.xx...-...x.:..:.x.xxx:x:....x.x..x::--------.::.x..x..x..::.x:x...xx.:x.x:x.x:x.x.:::.:.:....--:.x:..x:..:.:.:..x.x..xx...:x:.--..:.:....x:---------....:x..----...::x...x.x..--------...::x....:x..:..:..----------------------------------------..:x:.xx.::.x.....:.------.xx.:.....-..x.......xxx:x...:.::.-----------------:...x::.:..-----...:.:.:x....:..xx.:----x::....xx....--:.......:.:-......:...:.x.::.....:x..x........x..:.....:..x.....:........x..x..x..:...........:..:...........:.......x..........xx....---:.:..::x..xx..x:..:.::.x..x:x.x.--.:...:x..x:..:......... 159M5I20M3I12M2I26M15D12M7D20M3D12M12D28M2I19M5D33M5I17M7I29M1D30M8D49M2D31M2D11M9D8M4D14M8I20M40I20M6I10M1D23M17I11M5I20M4I13M2D11M1D122M3I32M2I23M 548/835 65.6% 944/94230402 0.0% 181/835 21.7% 81912286 NA +6378 chr4 + 190214555 120061947 120061946 120062101 155 AAGTAGAAATAATGTAATTCCTATTTACCTGTCATCTTTTGCAGTCTTGTCACACTCAATATCAAACTGCCATCTTTCCAGGACCTCACCACTTTCAATATTTGAGATAACTACAACCAGTTTCTGAACTGAACACTTGTATAACCAATCTGCAA chr4 - 94230402 38149944 38149943 38150098 56080305 56080304 56080459 155 AAGCAGGCACAGTAATGCTGTCACTCACCTCTCGCCCCTGGCGTTCTTGTCACACTCAATGTCGAACTGCCACCGCTCCAGCACCTCGTTGTTCTCAATGCTGGAGATGACCACCACCAGGCGTTGCACAGTGCACTTGTAGAGCCACTCTGGAA ...:..:x.:.:.:xx::.x::.:.:....x..::.::.x..:x................:..:........:.x:.....x.....:::::.:.....::.x.....:..:..x.....x:x:..x..x.x:........x.:...x....x.. 155M 102/155 65.8% 155/94230402 0.0% 0/155 0.0% 81912003 NA +4889 chr4 + 190214555 120066657 120066656 120066736 80 CTTACAGAAGAACTCGGCCACGATTTCGGCGCTCCCGCGCAGGGTGATTCC---CTGCTCCCGGGAGAGCTGCAGCGCCATGG chr4 - 94230402 38150484 38150483 38150566 56079837 56079836 56079919 83 CTTACAGAAGAACTCGGCGACGATCTCGGCGCTGCCCCGCAGGGTGATGCCCTGCTGCTCGCGGCTGAGCTGCGCGGCCATAG ..................x.....:........x..x...........x..---......x...xx.......:xx.....:. 51M3I29M 68/80 85.0% 83/94230402 0.0% 3/80 3.8% 81916173 NA +3080 chr4 + 190214555 120107163 120107162 120107240 78 CTCTGTATTACTCTTTTTTTTTTTTTTGCTCTTCTCATTTTATTTTTTATTTTTATTTTTTATTATACTTTAAGTTTT chr4 - 94230402 30944139 30944138 30944216 63286187 63286186 63286264 78 CTGTGTAGTGTTCTGGCTTTTATTTGGTCTGTTGTCATTTTATTTTCTCTTTTTTTTTTTTACTAAGCTGTAATTGTT ..x....x.::...xx:....x...xxx..x..x............:.x.....x.......:..x:..x...x.x.. 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 89163024 NA +3199 chr4 + 190214555 120148710 120148709 120148763 54 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATAAATACTTCACAGGACA chr4 - 94230402 48089505 48089504 48089558 46140845 46140844 46140898 54 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATA .:......:.:........:....x.x...........x...:.x....::.:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 72059205 NA +3018 chr4 + 190214555 120166748 120166747 120166790 43 TATATATATATACACACACACACACACACACACACAAAATACA chr4 - 94230402 21704674 21704673 21704716 72525687 72525686 72525729 43 TATATATATGTACACACACACACACACACGTGTATAAAATGTA .........:...................::::.:.....::. 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 98462074 91752481 +3018 chr4 + 190214555 120166748 120166747 120166790 43 TATATATATATACACACACACACACACACACACACAAAATACA chr4 - 94230402 21701101 21701100 21701143 72529260 72529259 72529302 43 TATATATATGTACACACACACACACACACGTGTATAAAATGTA .........:...................::::.:.....::. 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 98465647 91748908 +10550 chr4 + 190214555 120185613 120185612 120185975 363 TCCCATTCACTTAGTGCTCATTTCCTGGATAATAGGTAGTAGG--TTTTTTCCTCTTAGATACT-GCGTTTTAATACATGA-------ACCTCAACTGTTCATGTGCTATGTTAAATTTTATTGCTCCTAGCAGACCATTATCCAGGAGTATTGCTCTTAAGTAACTTCTCACCTAGTTATAAGCATTGTGGCCTCATTACATGGGGAATAAACATACTTATTCCCTAATGGTCAAGTCAAGAGAATGGCTGTTTCAACAAGTCAAGCAAAGG-AATTATTGCATTGTGTT--TTGTGAAATCTGCT---GTACAGATTTAGAAGACTGAAATATTTTAATATCTTGGAAAAAGAAATTATTTTCTTTATATTTTAAGT chr4 - 94230402 38197426 38197425 38197794 56032609 56032608 56032977 369 TCACAGTCAC--AGTGCTTTTCTTTTGCTT-----GTGGCAGGATTGTTTTTCTGTTAGCAACTTATTTTTTAACGCACCATTCTGACACCTTGACAGTTCATGTGCTAAATCAAACTTTACAATCACTGGCAGGCAGTTATT-AGATGTATTGCACTTAATTAACTTTGCACCTAATTACAAGCAATGCTGGCCGATTACAAAGGGCATAAATATATTAGTGCCCTAGCTGTCACATCGTGAACATGGCTGTTTGAACAAGTCAAGCAAAAGCAATTACCACATTGTGTGCATGGTGAAGTGTAGCAGAGTGCAGA--AAGAGGAATGAACTGTTTTACTATTCGTCAGAATTTAATTTTGCCCTTTGCATTTCAGGT ..x..x....--......:x.:.::..xx.-----..:.:...--.x....:..x....xx...-::x......::..:x.-------....::..x............x:.:...:....:x:::x..:....:.x:....:-..:x.......x.....x......:x......:...:.....x..:x.x.:x......x:...x.....:...:.x:.x.....::x....x:..:x..:x..........x...............:.-.....:::........x--.x.....:.x.:x:---..:....--x...:..x....x.:.....x...::xxx.:..xxx....x.x::....::....:.:.. 10M2D18M5D8M2I19M1I16M7I55M1D129M1I17M2I14M3I7M2D60M 245/353 69.4% 369/94230402 0.0% 26/353 7.4% 81988187 NA +3514 chr4 + 190214555 120197607 120197606 120197688 82 GAACAAAAGTGAACTCATTTTTCTGCTTAAGGAGGGAAGAGTGAAGAATAGAGAAACTCT--GTCTTGCCTGTTGGATGCCAGC chr4 - 94230402 33854086 33854085 33854169 60376234 60376233 60376317 84 GAACCACAGAAATCTCTTTCTTCTTCTTCAAAAGAGAAGGGTGAGGAATAGAGAAACTGTGGGCCTGACTTGCTGGGCATCAGC ....x.x..x:.x...x..:....x...x.::..:....:....:.............x.--.:..x:.:..:...::::.... 60M2I22M 58/82 70.7% 84/94230402 0.0% 2/82 2.4% 86343521 NA +3010 chr4 + 190214555 120200809 120200808 120200855 47 GTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCTTTTGTGT chr4 - 94230402 53202572 53202571 53202618 41027785 41027784 41027831 47 GTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTTGT ......:.::.....:.::............::.:........x... 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 66998237 NA +3127 chr4 + 190214555 120211681 120211680 120211743 63 CCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCTTTCCTTCCTCCCTCTCTTTCTTTT chr4 - 94230402 20485618 20485617 20485680 73744723 73744722 73744785 63 CTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTT .::...x:....x..:.x.:...::....::::....:.:..:....:.::..:......... 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 99726063 90488492 +3178 chr4 + 190214555 120215564 120215563 120215602 39 CCTACCAAGAAAAAAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 87676341 87676340 87676379 6554024 6554023 6554062 39 CCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ........:......:.:.:................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 32539223 NA +3003 chr4 + 190214555 120234306 120234305 120234341 36 AAACAAAAAACAAAAAACAAACAAACAAACAAAAAC chr4 - 94230402 21208654 21208653 21208689 73021714 73021713 73021749 36 AAGCAAAAAACAAAAAACAAACAAACAAAAAAAAAC ..:..........................x...... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 99025652 91188903 +3113 chr4 + 190214555 120236240 120236239 120236287 48 TCCTGGTTTATTCTCTGAAGTTCATGTTCTACCACAAGAGTATTTCTT chr4 - 94230402 40225402 40225401 40225449 54004954 54004953 54005001 48 TCCTGGTTTATTCCCTGAAGTTCATTTTCTAGCAAAATATGATTTCTT .............:...........x.....x..x..x.xx....... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 80010838 NA +20243 chr4 + 190214555 120243364 120243363 120244309 946 CAAAGAATGTTTAGTCTGGATCCCACAGAGGCCCACA-ATTCTCAGCACACAAACAGATACAGAAAAG---GGAGAAAGCAAATGTAGCATCAAAGAAAACTTCT-----GAATATAGACACCACCAAAAAAAACCAGCTCTGTGTTAGCCCAATAAAGAGAGAAATAACAAGGGTTTTGAATGCTAAAATATAGAGGATTGTATGAAAGGGAGGGAAACATACACAGA-GTAGACAAACTGAATAAAAGTATTTATCTTTAAACCACGCAAGTCATGGTAATTAAATTAGGTCAGACTGGTTACAATGCTACAAAAAGCAGGCTGTAACTAATTTCAAAAGGAACAGAAAAGACTTGAAAAGAAAACAGATTGACAGCTCCTGATTTTTTTTTATCCAATCAAAGCAACCCAACATCAAAAAGTGGGAAGAGAAA------CCTGATTTAGCAGGAAATTTGTCT-----CATTATAATATGTAAACTTTGCATATATATTCAAGATCAGCTCAGAAATATGGG-------AAATTATTATTTGCTCTATGTGAAAAACAAAAGTATACACATGAAGTTTGCCATTTGAAGGAAACTAATTGATTATAAAAAGCCTCTGCTCCT---TAATAGCTCAACTTCTATTACAAATGCCACAATCAATCTG---TATATTGTAACAACTTAGGGGCTTTCTCCCTGTCAGTATATTCTGCAT-------TCAGTTGTTTA-ATACAAACTCTGAAAGTATTATATG-----AACAAGAGAACGTTATGAGGCGTTTCTTTCAAATTG--TCTTAATAAAGACCACTTGCTGATGCCTATTACAAT-GACTTTTAAACATAGTTTCAAATATTTACTTTAAATGTAA----------ATGTGCCAAGTTGTAAAATGACATT--TGGAACATGAATTTGGGGATGGGAGAAAATAACAAAGGCAGACTTTTATTT---GGAGTGCATTCTATATTTTTAAAAGAATGTTTAAAAT chr4 - 94230402 38221265 38221264 38222208 56008195 56008194 56009138 944 CATAGGTTGTTT-GCTTGTGCCCCACGAAGGCCTGAACACTCACAGCATGCAACTGGGTAGAGCAAAGCAGGGGCTGAGCAGA-ACAACATCAAAGGGTCCTTTTTGTGAGAATATGGACAATGCTATAAAA--CTAACCTTGTGTTAACCCACTGAGGA-ACAGAGAGCAAGAATTCTGAATGCCATAACATAAGGAGATGCATGAAAGGGA---AAACTTATACAAAAGTAGACTGACTGAATAAAACTATTTATCTTTAAGCCACACAAGTCATGGTAATTAAATTAGGTCAGGCTGGCTATAAAGCTACAAAAAGCAGGCTGTAACTAATTTAGAAAGAGACAGAGAAGACTTGAAAAGAAAACAGATTGACAGGCCCCTA--TTTTTTTATCTAATCGAGGCAACAGAACTTAAGAAAGAGGAAAAGAAAAAAAAGCCTTGATTTATCAAG-ATTTTCTCTCAAGCCATTAGGATAGACAAA-----AGCACGTAGTCA----CATATTTGATGTGTGAAGGTTTTCACATTGTCATTAGTGTTAAATGAGGGATA----CATGCATATAGATTTTATC-CCTGAGAGAGACAGAATAATT---TAAAGCCTTAAAGTTTAGGAAGTGGTGGAAAGTATA--AGAAAGTTTAAAGCTGATTTGAGCTTTATCATTACAG---------TATCATTTCATCGATCCATTCTGAACATCTTTATCATCCGCTTCTATATGAA---GAGAAGTTCTACACATTTGCAAAAAGAGGACA--ATTAGGCTTTCATTTAAAACCACTTCTTTGTAAA-ACCACCTGCTTGTTCTGATTGAAACAAACCTTTGGAAATGTTTTCAAATTTTTGCTTTGAATTTTAATTTCTCAGCATGTACTGAGTGTGGAAATGCCATTACTGGAA-----------GAATGGAAGGA----------TTAGGAGTTTATTTACAGGTGTGAATCCTGGCTCATTAAAC-AAGGTTTAAAAT ..x..:x.....-.::..x::.....::.....::x.-.:..x.....::...x::.:..x..x....---..:xx:....:.-::.:........::xx...:.-----......:....x::.:.x....--.:.:.::.......:....x.:.:..-.x.:.x.:....::..:.......:.x..:...::.::x..:..........---....x..:...:.-......x:...........x.............:....:...........................:....:..:..x............................x:....::.....:............................x:..:x.--..........:....:.:.....xx...x.x.:....x..:..:::...------.:.......x..:.-.x...x...-----.....x:...x::...-----x::.::..x...----..xx.:x..x:.:..::-------.x...:.:...x.:x:..x:...:::.:.----:..:..:..::.x...::.-::...::..:..x:.x.:...---x.......:x:xx::.---x.:.:.:xx..xx.x..--.x...xx::.x.::::..:..---.x...::.x...:---------.x..x:::::..::.x:......x.:-------...x::.:..x-...::..---x::....x:..:.::-----..x.....:..:--..x....x..:x...x...:::--....x:....-.....:....x:.x.:x...:x..:-:..:...::.x..:x........x...:....:...x.x.----------....:.::...xxx:.....x....--.....-----------.:....:..:.----------x:..:xx.......---..x...x..:..:xx.:x.....x-..x......... 12M1D24M1I30M3I12M1D21M5I22M2D26M1D52M3D13M1I155M2D49M6I14M1D9M5I16M5D12M4D17M7I29M4D19M1D21M3D16M3I17M2D21M3I13M9D26M7I11M1I7M3D15M5I12M2D22M2I10M1D25M1I40M10I25M2I5M11D11M10D14M3I24M1D12M 603/879 68.6% 944/94230402 0.0% 132/879 15.0% 82022099 NA +3474 chr4 + 190214555 120257028 120257027 120257134 107 CTCATATATATGTGTATATATACGTATATATACA----CATA--TATATACGTATATATACACTAATATATGTATATATATACTAAAATATGTATATACGTATATATATGTGT chr4 - 94230402 73121098 73121097 73121208 21109195 21109194 21109305 111 CTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATAT--AAATACGCCCACAGAGACACACATGTAT ...:.:.::...::...x:....::.....:...----...:--..:.........x:.....x.:.......:x:..:...:--.....:.:x:.:.x:x.:.:.:....:. 34M4I4M2I39M2D28M 71/105 67.6% 111/94230402 0.0% 8/105 7.6% 47135930 NA +3294 chr4 + 190214555 120257107 120257106 120257155 49 AAATATGTATATACGTATATATATGTGTGTGTGCACACGCGTGTGTGTG chr4 - 94230402 19704278 19704277 19704326 74526077 74526076 74526125 49 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .....::...............x.....:...x..:::.:......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 100552829 89661726 +10273 chr4 + 190214555 120267781 120267780 120268819 1039 TACAATGGTCCAAAATAGATTCAGACAGACAACAACTTTGGCTGCCATTTTAGAAACCAA-ATGTTTTAGCATAATACACTGTTCTGTGTATATACAGATGGAAACTCAAACTTTGAAAAGAGAACTTTCTTCAAATACTGGTGC--------------------TTTCTTAGATGAGCCAGCT----------------TCTG--AAAGAAAACAGCTCTCTAATCTTTTATCACCTTGTCTCTTAAATACATCAAGGACATCTATTCAGAATTAGTT---GCCGAGGTGGGTGCAAAGAAAGCCTATTAATATGTGTAGACTGCCCATTCCCAGAATAAACCACATTTCC-------------------------------TCAATATATTACTTTCATGGCATTTTACAATATTTTCAAGTTTAGTTGGACATAA---TTCCAGAGATATGACAAGTCAATAGGTGGAAAAAAAACTAAATAAAATAAACTTGACCTTCAAAACATGCAATTCTTCTTCTGAACAAATCTCTCTTATTGGTGATCTGTCTCAAA----TTATATGTATATAAAAATATTCTGGGTGAGTAACATGACCAAAACATAGTGTCTGGTTGAGATAAAAGTCTTCTTTGAATATTGTTTGTAACTTGAAGACTTTGCTCACTCATTGGATAGATTCCATTAAACACAGCAGGG-AGCAATATATAGTGTGGATTATATGACTTTGCCTAATGGACATGCAAATACA------TATTTTTCACATACAATATACAAACATTTCAGCAGGACAATTGGGTAATGGAGCCAAAAAATCAG-----------AAAACTGGCAAATGTACAATGGATT---------------ACTATGGCTTTATTCCACACTTCAAATA----TAATTAACATTTAATTCA--------------------TCTGATGCCTTTTTCTAATTGGAGACACATTGGTAGATGGG---GCATTTGAGTTCA-CAAACACGTTCAATTACTTACACGTTAACCACATTTCACAAACTTCCAACTTGTG---AAGTATTTTCTAAAGAAAACTTTATATAGTAGAACTTGCAGATCTGACCAAATGAAATTTTTATCTTTTTTTTTGCCGTTGCTTCTCAAATTATGCTCACCTGAAGTCAGATTTCATATT chr4 - 94230402 38231390 38231389 38232480 55997923 55997922 55999013 1091 TATAGAGCCTCAAAACATATCCAGATGGACAGTTACTGTGACTGCCACTTACGAAACCAGTATAATCTAGCACAATACACAAAGTAGGGTAAGTGTGGAAGGAAAA-CAAGTTCTGAATAGGGGACCTCCTCAGAATATTGGATCAGCCATCAGACACACCAATTCTGTTTAGACAGGCCTGTTATACACACCCAAATGTTCTGCAAAACAAAGCAAACCCCCAACCTTTCACCACTTTA-CTCCTAAACAC----------TCTGCCCAAGGGTGGTCTTCACCCTGCTTGATGCAG--------TATTTGTGCCTACA---TCTTTATTCACAAAATGAAGCTTGTTTCCATAGTTTTTTGGCAAAGCTGAGATACGTAAACCATTTTATTCCTCTCAGAGGAATATCATATCTTGGCAGTTTTATTTGAGTCTGACCTTTTAAAATATGCAACAGAAAAATATG-----AACAAACAGATTACTGTA---CTGATGTGT------TGCCATTCTTTTGCCAGTGGATTCCCCTGCAT-----ACCTCCTTCAGCCCGCTTGCATGAAACTAGGACTATC-------AGAAACACTAT--GAGCAAAGAATTTGGTCAAGATAAAAAC--------AAAGTTATTTGAAAAG-ACAGTCTTTGTTCACTTGCTGGATGATGGCTTCTAAGCACATTAAAGTAGCAAAGTATAGT---------ATCATTTTTTGTGATGGGTGCAAAAATCAAACTTTCTATTTTTTGTATACAGAATACAAATATCTCAACAGGATGATTACATAATGGAGTCAAGAAATGAGAAGAAGAAAAAAAAAAAAACAAGTTTACA--GGATCTTTACAGCAACTAAATCCATGGCTTCATTTCTCACACCAGCTAGTGCTTATTGGTATATAGCTTAGTGGTGCTTATTTCAGCAATTCTGACACCTATGTCTATTT----ACTTGTGTGTTGATGGAAACACATCTCAGTGCAGCAGGCATTCCCATTTACTTTTTTATTAGTTACATTCCACAAATTTCCAACTTACGTGTTAGCAATTC----AGAAAATTGTCTA----AGAAATCACAATATTAATTCACGGAA--TTTCACCTCCTTTTCTGCCTTTTCATTTCAG-------TTCCTTGTAGTCAAATTACGTCTT ..:.:x.x::.....:.x..:....::....::x...x..:......:..xx.......:-..:x.:.....:.......x:xx:x.x...x:.:::..x.....x-...::.:....x..:.:..:.:..:x:....:...xx.--------------------:.x:.....:::...x.:.----------------....--...x...:..:x:.:.:..:....:.:...:..:-...:....:..----------...:::..:::x.:..:---:..xx.x.x.:....:--------....x:.::x.::.---.x:::....x..:...:..x.x::.....-------------------------------:..x.x....x..:...x:.x.x.x.xxx..x..xx..:x....x...:::x.:.---..:x.:.x..:::...::xx....x.-----..x....x:.x..xx:..---:...:x.x:------...x......:.x.:::xx:.x..:.::x:..-----.:..x::...:x----..::...x.xx..::.x...:-------..x....:x.:--:.:..x..x:.:....::........::--------..x:..:....x..xx-:x..x.....:.....:::.....::xxx.:x:...:....x:.::.-.....x:......---------..x.:...x:x.:....:::::x....xx.------.......:::.....:x.......:..:...:.....::...:x:........:...:....x..-----------....xx::...:.x....--....:---------------x.:.......:...:.x...x:..:x..----.x...:::..x..::.:.--------------------.....::...x.x....x..----..x::.xx..x.....:---:...:.x...x..-..::..:x::..x......x:x::...:::.....:......:.........::.---x..:.x..:----......:.x.x..----....x.::..:xx:.:.::x.xx...--...:.:..::....:....x..x.x.:...:-------.:x.:..x.....:...x.:.x.. 60M1I45M1D38M20I19M16I4M2I34M1D11M10D17M3I16M8D14M3D29M31I55M3I26M5D18M3D9M6D32M5D12M4I21M7D11M2D28M8D16M1D47M1I13M9D30M6I65M11I18M2D5M15I28M4I18M20I20M4D17M3I13M1I55M3I9M4D13M4D26M2D31M7D24M 592/947 62.5% 1091/94230402 0.0% 236/947 24.9% 82036391 NA +3357 chr4 + 190214555 120273337 120273336 120273484 148 TTTTTAAGGAAAAAT--TTGTGCAATTTT-GTAGATTTATAACCACAAAGATAATTAAAGGATATATATATATATACACACACACACAGACATATATATATATACATATGTGTGTGTAT--ATGTATATGTATATATATATATGTATGTATGT chr4 - 94230402 4417286 4417285 4417434 89812969 89812968 89813117 149 TTTTTGACGAAAAATACTGATTCATTTTTCTTACATGCCTGTTCATAAAAAC--TTGA--GATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .....:.x.......--.x:.x..x....-x..x..x:x.:x:..:...:.:--..:.--...x..x.:...................::x.:...:::..:x:x:.x..::::.....--.x.:..x.:x.....:.:....x...x...:. 15M2I12M1I22M2D4M2D59M2I32M 96/144 66.7% 149/94230402 0.0% 9/144 6.2% 115856051 74358504 +3143 chr4 + 190214555 120273391 120273390 120273441 51 AAGGATATATATATATATACACACACACACAGACATATATATATATACATA chr4 - 94230402 66528056 66528055 66528106 27702297 27702296 27702347 51 AGGAATATATATATATATACACACACACTTGGGAATATATGTATATTCCTA .:.:........................x::.:x......:.....x.x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 53745335 NA +3120 chr4 + 190214555 120273395 120273394 120273464 70 ATATATATATATATACACACACACACAGACATATATATATATACATATGTGTGTGTATATGTATATGTAT chr4 - 94230402 71630136 71630135 71630205 22600198 22600197 22600267 70 ACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::.::..::.............x.:.x......x.x.:...:...:...x..::.:.:x:...:...:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 48643259 NA +3211 chr4 + 190214555 120273396 120273395 120273466 71 TATATATATATATACACACACACACAGACATATATATATATACATATGTGTGTGTATATGTATATGTATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..::...:.........x.x.:.:....x.x.:..:::......x..:..:..x......:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 48643261 NA +3177 chr4 + 190214555 120314133 120314132 120314194 62 AGTACTGTGCAGCTTGCCTCAATGCTTTTGTTTTTTCTTTTCTTTTTTTCTTTTCTTTTTTT chr4 - 94230402 46959176 46959175 46959237 47271166 47271165 47271227 62 AATATGGCACAGATTGTTTTAATGCAATTATTCCCCCTTTTTTTTCTTTCTTTTCTTTTTTT .:..:x.::...x...::.:.....xx..:..::::.....:...:................ 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 73354957 NA +3842 chr4 + 190214555 120326306 120326305 120326501 196 AAAAAAAAAAAAGAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAA---------AGAAAGAAAGA-----GAAGGAAGGAAAGAAAGAAAAG-------AAAGAAA------GAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCAAGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAG-AAGAAAAAAGAAGG chr4 - 94230402 79684112 79684111 79684331 14546072 14546071 14546291 220 aaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCTATACATAAAGAAAATATAATTACTCCAACCACAGAAATACTGATTTTTATTGGTAGAAAACATAGCAGGGCTTTTTGAGAGAACACCACTGAATGAAAGCAAGAGAAGCAAAAACCAGATGAAAGGAAAAAAAGAAGAGACAGATGAAAGA----AAAGATGAGAGCTGGGCAAGAAAACAGGAGG ...:........:..:...:...:..::..::..:.xx:x.x.x......:.x.x..xx.x---------.....x.xx..-----:xx..x..:...x.x..x.::.-------.:....x------...x.....x....:...x..:..xx.:.x.....:..:....:.:x.::..::::.....----.....x:....xx.:.-.......x..:... 61M9I11M5I22M7I7M6I61M4D16M1I14M 128/192 66.7% 220/94230402 0.0% 32/192 16.7% 40642194 NA +3192 chr4 + 190214555 120326306 120326305 120326366 61 AAAAAAAAAAAAGAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAA chr4 - 94230402 20475871 20475870 20475931 73754472 73754471 73754532 61 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAA ............:..:......:....x....x......:x.x:x.:...x.x.:..:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 99850435 90364120 +3356 chr4 + 190214555 120326311 120326310 120326425 115 AAAAAAAG----AAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA chr4 - 94230402 25255597 25255596 25255715 68974688 68974687 68974806 119 AAAAGAAGCTGCAAAAATTAGAACAGATGGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGA ....:...----..:..xx.:.:x..:x:.....:x...:..::x....x.x.x..::...xx:.:x.:::.....x.x:...:...:....:...:.::..xx...::.x........ 8M4I107M 72/115 62.6% 119/94230402 0.0% 4/115 3.5% 95070714 NA +3148 chr4 + 190214555 120326318 120326317 120326415 98 GAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 67772341 67772340 67772438 26457965 26457964 26458062 98 GAGAAAAGGGTGAATGAAAGAGGAAATGAGAAACAGGGCAGGAGAATAAAGTAGGAAGGAAAAGGAATTGAAGGAAAAAAGAATGGGAAACAGTAGAG ..::....::x...x...:..:.:..x..:.:.x..::x.::::..x....x.:...:..:......xx:...:..:...::.x:.:..:x.:x.:.. 98M 58/98 59.2% 98/94230402 0.0% 0/98 0.0% 52553977 NA +3232 chr4 + 190214555 120326331 120326330 120326439 109 AGGAAGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAA chr4 - 94230402 73209987 73209986 73210095 21020308 21020307 21020416 109 AGGAAGCAAGAAAAGAAAGAAACGATGCCGTAAGTATGAAAAAGATCCATGGGAGAGACAAAACAAGAAGAGGAAACGAGGAGGAAGCTAAAAGAAGAAAAAGACAGGA ......x...:..:........x:.x:xx.x...x.x....:.:.xxx.x..:..::.x:...x..:.::.:....x:.:..:::.:xx.......::...::.x..:. 109M 66/109 60.6% 109/94230402 0.0% 0/109 0.0% 47116344 NA +3234 chr4 + 190214555 120326335 120326334 120326443 109 AGGAAGGAAGGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAA chr4 - 94230402 73209987 73209986 73210095 21020308 21020307 21020416 109 AGGAAGCAAGAAAAGAAAGAAACGATGCCGTAAGTATGAAAAAGATCCATGGGAGAGACAAAACAAGAAGAGGAAACGAGGAGGAAGCTAAAAGAAGAAAAAGACAGGA ......x...:..........:x:.x:xx.x...x.x....:...xxx.x..:.:::.x:...x:.:.::.:....x:.:..:::.:xx:......::......x..:. 109M 66/109 60.6% 109/94230402 0.0% 0/109 0.0% 47116348 NA +3025 chr4 + 190214555 120326360 120326359 120326404 45 GAAAGAAAGAAAGAAAGAGAAGGAAGGAAAGAAAGAAAAGAAAGA chr4 - 94230402 23164519 23164518 23164563 71065840 71065839 71065884 45 GAGAGAAATTAAAAGAGAAAAGGAAGGAAAAAAAAAAAAGAAAGA ..:.....xx..:.:...:...........:...:.......... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 97161841 93052714 +3492 chr4 + 190214555 120326376 120326375 120326503 128 GAGAAGGAAGGAAAGAAAGAAAA--------GAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCAAGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAGAAGAAAAAAGAAGGAA chr4 - 94230402 72821454 72821453 72821588 21408815 21408814 21408949 135 GGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAA-AGAACCAGTAAAAAGGAA .::....x.:...::....x.:.--------...:xx...:::....................x::xxx.x.:.:.:..:::::.x..x..:x.x:..::...:.:.x....x....-....xx.:x..:...... 23M8I86M1D18M 81/127 63.8% 135/94230402 0.0% 9/127 7.1% 47504922 NA +3367 chr4 + 190214555 120326377 120326376 120326514 138 AGAAGGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCAAGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAGAAGAAAAAAGAAGGAAGGAATTTAGTG chr4 - 94230402 44053990 44053989 44054127 50176276 50176275 50176413 138 AGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTG ....x.:....:.:.:.:..:.:::...x.::..:.x:.::..:x::.xxxx:......::..::.:.x.....x.x.x:...:x..x.....::.x.:x:x.:.::x.:.x:..x...:....:.....:xx:.... 138M 77/138 55.8% 138/94230402 0.0% 0/138 0.0% 76272387 NA +3459 chr4 + 190214555 120326412 120326411 120326554 143 AAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAAGCAAGCAAGCAAAAGAAAAGAAAGAAAAGAGAAGAGAAGAAAAAAGAAGGAAGGAATTTAGTGGTCTCTTTTTTTGAGAACTTGCATGTGGTATAAGTACTTC chr4 - 94230402 32280614 32280613 32280753 61949650 61949649 61949789 140 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAAAGGGC---CATTTAGGCGGCATTTATGTTTGTATATCAGATGAGGTATAGAAAATTC ...:...:....................:x.xx.:...:.:....x.x.x.:x.x:....:.:x.x.:x..x....xxx...:..:.:..x---x......xx.x.x:..x.x..x:x.xx.::x...x......::x.x... 91M3D49M 89/140 63.6% 140/94230402 0.0% 3/140 2.1% 88045798 NA +3154 chr4 + 190214555 120344980 120344979 120345073 94 ATGAAAGTGAGAAGGCAAAACTGATCATCTTATTTCAAGACACTGTGGCAATTATGTGGTTTAAATTTCTTTAT-----TACTTTAT--TACTTTTAGGTT chr4 - 94230402 42569003 42569002 42569101 51661302 51661301 51661400 99 ACGGAAACAAGAAAGCAAAACTGGCCATGTCATTCCAAGTCACTATTGCAATTATAC--TTTTATGTTATTTGTCTAAACATTCTATTGTAATTTTAGATT .:.:..:::....:.........::...x.:...:....x....:.x........::--...x.xx..x...:.-----:.:.:...--..x......:.. 57M2D15M5I8M2I12M 66/92 71.7% 99/94230402 0.0% 9/92 9.8% 77775977 NA +3048 chr4 + 190214555 120367666 120367665 120367726 61 AGCTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGA chr4 - 94230402 37847412 37847411 37847472 56382931 56382930 56382991 61 AGCTCGAACGTGACGAAGACGAAGGAGAAGAAGGTGAAGTTGAAGAGGGGGACAAAGAAAA ....:...x:x..x.....x....:........:x....xx.......::..x:.....:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 82520254 NA +3278 chr4 + 190214555 120367675 120367674 120367814 140 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAGGAAGAGGAAGAGGAAGAAGAAGATGAAGAAGAAGA--AGGGCAACAACAACAACATTGC chr4 - 94230402 59322148 59322147 59322289 34908114 34908113 34908255 142 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGATTTTGATCAGTCTGATGACAGCAGTAGAGAAGATGAACATGCTAACAGTAACAGTGTTAC ....:.....x..x..x...x.x.xx.:x..xx............x:..............::x...xx.:...::x..x:.xxxx..xx.:xxx..x..x::x::.::......x..--.x.x:....::....:::..:. 118M2I22M 86/140 61.4% 142/94230402 0.0% 2/140 1.4% 61045527 NA +3200 chr4 + 190214555 120367681 120367680 120367762 82 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAGGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx..........:.x...:...........::x:..xx.:....:x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 61045533 NA +3240 chr4 + 190214555 120367684 120367683 120367765 82 AAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx.:..:.......x...:............:x...xx..:..::x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 61045536 NA +3107 chr4 + 190214555 120367690 120367689 120367771 82 AAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAGGAAGAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx.......:....x...:.....:......:x.:.xx.:...::x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 61045542 NA +7537 chr4 + 190214555 120374477 120374476 120374669 193 GAAACTAGGCTTTATCAAAGGGATTGCATGAAAGAGATCAGTAAAGCAGAAAAGAGTTCAGGAATGTTTAATCCCAAAGG-AATAACATTTATCAAAGCAATTTGCAAGAATAATTCTGTCACTTCTGCTTTTATAAACAAAGGATAGCAAATGAGTTTCTAACATTTACTACTGAATTTGAAGCAGTTTTTCA chr4 - 94230402 38270837 38270836 38271018 55959385 55959384 55959566 182 GGAATTAAATTATATC--------TGTTTGAAAGGGATCAGTGAGGCATAAATACGTTCAGGAATGTTTAATCCTAAAGGGAATGAGATCTGTCAAAGCAATTTGAAAGGATAATACATTCATTTCTGGTTCTACGGGCAAAGGAAAACCCAAGAGTCCAAAGCATCGTCCACTCA----GAAGCTGTTTTTCA .:..:..:::.x....--------..:x......:.......:.:...x...x:x...................:.....-...:.x..:.:.............x...:.....x.xx...:.....x..:..::::.......x.:.xx.x....::xx.:...:xx.:...x.----.....x........ 16M8D56M1I95M4D14M 133/181 73.5% 182/94230402 0.0% 13/181 7.2% 82103640 NA +3046 chr4 + 190214555 120457165 120457164 120457204 40 TGGAACAAATATATACATATGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 53251979 53251978 53252018 40978385 40978384 40978424 40 TAGCATAAATATATACATATGTGTGTGTGTGTGTGTGCAT .:.x.:...............................::. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 67205186 NA +10731 chr4 + 190214555 120472547 120472546 120473008 462 GAAGAAATAAGAAAAGAAAAATGTGCATGT------TGAAATATGTAGGCTTTCATTTTAATCATTCAACACC-ACTGTATTGAAG-TGCATACAGACAGGAAAAAATAATTC--ACTGTCACTTCAA------AGAAATATGATTTTACTGCAAGAAGAGAAATACGGCTGACACATTAAGAGTAGTTATTATGAAAAAACAATATTGATCAAATTGCAGTTTGCACATAATTCAGCCAACTTCCTACTTGCATCATAAAATTTGCATTCTTCAAAATTGCAGCTATATGAAATGATGAAGTCTTTTCATTATTCAT-TTTGCCACTGTCT-CAGAATTAAAAGTCTTGTTGCTGACAAAAAGCCAATTAATCATATTTATGGTGACAACCATGACTATTATAAAACAGACATTCTTAGAAAGCATGCC--CTTTTCTTTACA---------------TCAAAACCTGTTGAACATGCTCTTCCATCCC-CTGAGGC chr4 - 94230402 38298842 38298841 38299328 55931075 55931074 55931561 487 GGGGAAACTTGGAAAAAAAGTAATGCCTATCTTCTATGAACTGCATAA---CTTGTATTAATTACTCAGTGCCCACAGTCTAAAAAATTTTTGCTAAAGGAAAAAAATTATTCCTATTTTTCTTTTGATCATTGAGAGAAATGGCACTG-TGCTAAGGGAAAAGTGAGGCTGGCACATTAAAAATCGTTACTAAGGAAAG-CACTACTGGCCAGATCGCAGT---CGTGCGATTCAGTCAACTGCCTGC---AACTATGCGATAGGAACAGTTTAAATTCTCAGCTTTTCAGAAGGATGAAGCTTTCTCCCTGTTCATCTTTGCCACCATATGAAGAACTAAGAGAGTGGCTGGTGATGAAGAACACGTTAATCATGTTTATTGTGACAACCACAACTGTTATAAAACAGATACTCTTACAACACATGCTAACCTTCCCTGACACTCTTTTTTCCTCATTCAAAACCCGTTGAGCATTCAGTTCAAGCCCACTGAGAC .::....:xx.:...:...:xx:...x.:.------....x.:::..:---:.::.x.....:.:...:::..-..x..x.x:..:-.x:x.:.x:.x:.:.......x....--.:.x.:x:..::.------...:.x...::x:.:-...x.:::..:..:.:x.....:........:.:.x....:..x.:...:-..x..:..::..:..:.....---.:::::......:.....x...:.---x.::..:x:..xx.x.:xx..:...x.:x.....x.x:::..x.......::..:..x:.:.....-........::.x.-x....:...:..xx.x.:..x...::..:.:.xx:........:.....x..........::...:............:.:.....x..x:.....:--.:..:.:.x...---------------........:.....:...x.xx...x.x...-.....:. 30M6I12M3D22M1I12M1I26M2I13M6I15M1D50M1D21M3D24M3D66M1I13M1I97M2I12M15I31M1I7M 296/451 65.6% 487/94230402 0.0% 47/451 10.4% 82173705 NA +3001 chr4 + 190214555 120476453 120476452 120476492 40 ATATACACATATATATATATACACACACATACATATGACT chr4 - 94230402 8681930 8681929 8681969 85548434 85548433 85548473 40 ATATAAATATATATATGTATGCACACACATACATATAACT .....x.:........:...:...............:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 111794523 78420032 +3124 chr4 + 190214555 120486464 120486463 120486530 67 AGGGAAAAGAGTAATAGGAAAAATATAATTCACACAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 2273530 2273529 2273596 91956807 91956806 91956873 67 AGGAGAAAGAATGAATTAAAAATTCAAATCCAAATAAAGCTTTTTTTCTTCTTTTCTTTTCTTTTTT ...::.....:.:.xxx:....x.xx...:..x.:...x........:..:....:....:...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 118212934 72001621 +3146 chr4 + 190214555 120500318 120500317 120500403 86 TGTCTATAGTTTTCTCTTTCTTTATACTTTTTTTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151540 56151539 56151625 38078778 38078777 38078863 86 TGCTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ..::...:.x...:.:...:.::..x:.:.:.x.xx.xx..:.:..x.x..::..:.::.:............::.:......x.. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 64348778 NA +3008 chr4 + 190214555 120500334 120500333 120500401 68 TTTCTTTATACTTTTTTTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 10540148 10540147 10540215 83690188 83690187 83690255 68 TTTCCAAATACTATTTTTTTTTCCTTTTTTTCTTTTCTTTGGAGTTTCCTTCTCTTATATCTTTTTCT ....:xx.....x.......:..:..:.............xxxx:..:...:::..x.x.....:.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 109960186 80254369 +3427 chr4 + 190214555 120500345 120500344 120500442 98 TTTTTTTTTCTCTTTCTTTTCTTTTCTTT--CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTT-TCCT-----TCTTTCT chr4 - 94230402 49363792 49363791 49363897 44866506 44866505 44866611 106 TTTCATTTCTTCTTTCTTCCCCCTCCTTTGTCATTTTTTCTGTATTATTCTATTTCTTTCCTAGTTATTTGCTGTCCCTGTTTTTCTTTGTCCTGTATGTCTTTCT ...:x...::........::.::.:....--.x..:.....x.x..x:.:.x........:.xx..x...x..x..:..x.:.......-....-----....... 29M2I58M1I4M5I7M 72/98 73.5% 106/94230402 0.0% 8/98 8.2% 71136553 NA +3033 chr4 + 190214555 120500353 120500352 120500457 105 TCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTTTCCTTCTTTCTTTCCTTATTTCCTTT chr4 - 94230402 19053884 19053883 19053988 75176415 75176414 75176519 105 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCT .::...:...x..::.:x..xx......:x..:..:.:......xx...:.x...:..::.:...:.:.:...x::.:x.x..::x...x:.xx...:..x:.:. 105M 62/105 59.0% 105/94230402 0.0% 0/105 0.0% 101446469 88768086 +3003 chr4 + 190214555 120500367 120500366 120500423 57 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTT chr4 - 94230402 78373634 78373633 78373690 15856713 15856712 15856769 57 TTTCTTTTCTTCTTTCCCTCCAGTGCTGTCTCGTTTTTCTTTCTTTTCTTTTTCTTT .......::.......::..:xx:x:.x.:..x..:...............:..... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 42126733 NA +3049 chr4 + 190214555 120500367 120500366 120500431 65 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTTCTTTCTCTTTCTTTCTTT chr4 - 94230402 17388732 17388731 17388796 76841607 76841606 76841671 65 TCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTCTCT .::.....xx...:...:.......:..:.::...:.:.:.....x....:...x.x:x....:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 103111635 87102920 +3139 chr4 + 190214555 120525921 120525920 120525982 62 TCTGGAACACAGAGTAAAACAGAGACTATGAAGCTTACACACACACACACACACACACACAC chr4 - 94230402 49538294 49538293 49538355 44692048 44692047 44692109 62 TCAGGGATGCAAAATATTGCAGAGAACATGAAAGTTACACACACACACAGACACTCACTCAC ..x..:.::..:.:..xx:......x:.....:x...............x....x...x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 70987627 NA +3024 chr4 + 190214555 120525981 120525980 120526071 91 ACACACACACACACATACATATATACATACATACGTGTATATATGTATAAATTCATATATATATATATACACATTCTTGTCAGTCATTGGG chr4 - 94230402 52481237 52481236 52481316 41749087 41749086 41749166 80 ACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATA-----------TAATCATTGGG ...::x.:.:.x:.:.....:...::.........:::...:xx:......:.:....:.:.:.x....-----------:.:........ 69M11D11M 54/80 67.5% 80/94230402 0.0% 11/80 13.8% 68044744 NA +3173 chr4 + 190214555 120546241 120546240 120546297 57 AAAAATATATATATATATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 8395806 8395805 8395862 85834541 85834540 85834597 57 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x..:...x..:....:...::x....:xx.:.................x..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 112150435 78064120 +3134 chr4 + 190214555 120546243 120546242 120546299 57 AAATATATATATATATATATATATACACACACACACACACACACACACACACACACA chr4 - 94230402 8395806 8395805 8395862 85834541 85834540 85834597 57 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:..:...x..:....:...::x:...:xx.:.................x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 112150437 78064118 +3176 chr4 + 190214555 120546245 120546244 120546313 69 ATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACAGA chr4 - 94230402 8395796 8395795 8395864 85834539 85834538 85834607 69 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ..:.:.::...x.:..:...x....:.:::.::.x:...:xx.:.................x.....:. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 112150449 78064106 +3338 chr4 + 190214555 120546247 120546246 120546322 76 ATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACAGAATTCAGCCT chr4 - 94230402 8395808 8395807 8395883 85834520 85834519 85834595 76 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACT .:..:...x..:....:...:.x:...:xx.:.................x.....x.::x.:.x.:..::..:x.. 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 112150439 78064116 +3114 chr4 + 190214555 120551697 120551696 120551807 111 TTCCGTCTTTCCTTCCTTCCTTCCTTTCTCTCTTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTGTTGTTGT chr4 - 94230402 13896867 13896866 13896977 80333426 80333425 80333536 111 TTACTTTTTCATGTCCACCGTCCATTTCTTTCATATCTTTATCCTCTACTTTGGTACATTCTTCCTTTTTCTTTATTTCCTTGTTGCTGTGCTTTATGCTTCTGCTTTTGT ..x.x.:..:x:x...x:.x.:.x.....:..x.x...:.x.::::.x....xx.x.x.....:..........x....:..x:.x:.x.x::..x.x:.....:.x.... 111M 69/111 62.2% 111/94230402 0.0% 0/111 0.0% 106654830 83559725 +3023 chr4 + 190214555 120551712 120551711 120551799 88 CTTCCTTCCTTTCTCTCTTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCT chr4 - 94230402 15963347 15963346 15963434 78266969 78266968 78267056 88 CTTAGTTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCT ...xx..x:...:x:x...x...xx::..xx.x......:.......:......:.:..:.xx:....:....:xx.....x:..... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 104588365 85626190 +3183 chr4 + 190214555 120551720 120551719 120551788 69 CTTTCTCTCTTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTCTTTTCTTT chr4 - 94230402 88442030 88442029 88442098 5788305 5788304 5788373 69 CTTACTCTTTTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTTT ...x....:...x:::.:.x...........x:......:x.:...........xx.x.x....x:... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 32109690 NA +3187 chr4 + 190214555 120551766 120551765 120551841 76 TCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTGTTGTTGTTGTTGTTGTTGAGATGGAGTCTCACTCTG-TCGCC chr4 - 94230402 10359730 10359729 10359806 83870597 83870596 83870673 77 TCCTTTTCTCCTTTTTTTTTTTTTTGTTCAGTTTGTTGTTGTTGTTGTTATTGTCATAGCCTGAAGCTCTGCTCGCC ..:..:.:..:...:....:...:.x...xx.:................:...xx..:.xx.xxx:.....-..... 71M1I5M 55/76 72.4% 77/94230402 0.0% 1/76 1.3% 110192036 80022519 +5459 chr4 + 190214555 120568868 120568867 120569163 296 TCTCATAGATGACACAGCTGTCTGCAAGTGCCTACTGTTTTGTCTCAAAACTTGTAGGGA--CAGGTGCATCTTGTCATTCTCTGGTATACATTACAGG--------CCTGCCTTGTTTATCATTCCAAGATGAGCTCCGATGTGAGTAGCACTGACAGTGCAGCGTATAATCAAATGCCCTTTGAACTGAGGGACCAGAATTTATTGGTGTTAACACATTTTACAGTTTATAGGG-TCATCAGCCCCTTAGCTTCTGAGACTTTTTTCAAGCTTAGCTTTGAATCTATAAATACAACTGATTTATA chr4 - 94230402 38333640 38333639 38333918 55896485 55896484 55896763 279 TCTCATGGATTATGCAGGTCTTAGAAAGC----------TTATCTAACATCTAACAATGATGCATGTGCATTTTGTCACACCACGGTGGGCTTTTCAGGAGTTCATATCCATCCCATTTACAACTCAATGATGAGC------ATGAGTCACAACGCGATTCCTGAATAAAATGAAGCGTATTTTGAACCTTAGGACTAGAATTTATTGTTGTTAGCATATTTTA--------AGAGCCCACTAAATCTTAAACTTGAGAAATACTTTT---GCCTGATTTTTAAT-TGTAAATACATCTGATTTTTA ......:...x.::...x.x.:x.x...:----------..:...x.x.x..x::.:x..--..x......:......:x.:x:...:x:.x..x....--------:.:::.:::....:x.:..x.x.......------:.....x:..x:.xx.x.x.x.x:..x...x..::.:x:.......:xx:....:...........x.....:..:......--------..:.-:..::.:x:.:.x.:...xx..:.:x:....---..:.:::...x...-.:........x.......x.. 29M10D21M2I37M8I29M6D82M8D4M1I31M3D14M1D21M 174/268 64.9% 279/94230402 0.0% 39/268 14.6% 82235228 NA +3093 chr4 + 190214555 120582320 120582319 120582394 75 CACATAAAATAGTTGGTTTTTTTTTTGTTTTTTTTTGTTTTTTTTGTTTTTTTTTTGAGATGGAGTCTCACTGTG chr4 - 94230402 528348 528347 528422 93701981 93701980 93702055 75 CATTTAGAATTGGTGGGTTTGGGTCTTTTTTCTTTTGCTCTTTCTGTTTTTTTTTTGAGCTGTCCTTTTGCTATG ..:x..:...x.x...x...xxx.:.x....:.....:.:...:...............x..xxx.:.::..:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 120053972 70160583 +3078 chr4 + 190214555 120621332 120621331 120621380 49 AAGTAGGTAATATTATGCCTATTTTTCAGATAAGGAAACTGAGGTATCA chr4 - 94230402 80987852 80987851 80987900 13242503 13242502 13242551 49 AGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTA .:...:...:..x...x........x.....::...........:..:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 39633480 NA +3054 chr4 + 190214555 120638352 120638351 120638399 48 TCCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTGAGATGG chr4 - 94230402 72884654 72884653 72884701 21345702 21345701 21345749 48 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGG ..:.x..::....:...............:.........:..:x:... 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 47753698 NA +11071 chr4 + 190214555 120664199 120664198 120664520 322 ATTCAGTAGTAGCTGAGCAAA--------AATGAACAAGATTTCCCAGGGTGCTAAAGTTCCAGATTGTTTCTCAAAGAATGACATCAATTATTGTCACTTTTTTTTTGTCAGCTGTGAACCATGATTAATTGGAGACATCCAAATTTCTGCATGTCTTATGTCACAAACTTCTTTGTTT-CCCATCTGTTTTGTCCAATGTT-CA--CCAACAAGTTCCA---CTTATATCCTGTCAAAGCTAGGAAAAATGTCTCACAATGGATTGGAG-GGAAACA---------------------CTGAAGATGATGGAAATAATGATACATAAATGAATGGCAAAAACAATGATTTAGCAAAA chr4 - 94230402 38361073 38361072 38361423 55868980 55868979 55869330 351 ATTCACCACTAACTTAACAAAGGAAAAGAAATGAATGAGCTTTTCCAGGCTGCAGTAGTTCCAGATTGTCTCTCAAAGGGCTGCATCAATTACTGTCAC---TTATTTGTCAGCGGTATGACATGATTAATTGGTGAGATCCACATTTTTGCGTGCCTTACGTCACATGCAACTCTGTTTCCCCATCTGTTTTTATTGGTGTTACAGCCCAAAGCGTTCCACACCATGTACCTTGTCAAAAATA-TATTAATGTCTCACAATGGACCCAAGCTAAAACAACTTAAAACCCTACAGATCACCTAAATGTGCTGAAAATAAAGATGTAAAGAGAAATGACTGAAA----GATTTAGTAGAA .....x:.x..:..x.:....--------......::..x...:.....x...x:x.............:........:::x:.........:......---..x.........x..:x:x.............x..x.....x....:...:..:....:......x:.xx..:.....-............xx::::....-..--....x:x......---.x.:..:.:.......:x..-x.xx................::x:..-x:.....---------------------..:..x:..x..:......x...::.x.:.x:....:.x:...----.......:.:.. 21M8I70M3D78M1I22M1I2M2I13M3I20M1D26M1I7M21I43M4D12M 234/314 74.5% 351/94230402 0.0% 45/314 14.3% 82303126 NA +14144 chr4 + 190214555 120694982 120694981 120695286 305 TGTAGGCAAATAAGAACTATGAGACCAGTAA---------------GTCACTTTTGGCTACTTCTGTTATGCTGATCAGGTGATAAAAATCTGGGATT------CATATTAG--GAGCCCTTCTGAATA---GTTTAATTCCTTTACAGCCCCTAT---TAGCTGTCAGCTACACCATGGATATTGTCCATGTGCACTTTGAGGTAGTCATTCCTTGTAAACTTCTTATGGCAAAACTGGCATTCTGCCAGGGGACGATTGGGATTATGAGTCATCTTGTGTCGAATCAGCATTTTCTTCAGGCTAAAAGCCAAATCACAAACCTAGAAAAGAC chr4 - 94230402 38376357 38376356 38376682 55853721 55853720 55854046 326 TGCTAGCATATAAAAAAAGTGAGAAAAATAACATGCAAACACAGTTGTTTCTCCTGACTATGTCTA-----CTAGTCAGGTGA--GAAGTCTGGAGTATGTACACATACAAGTGGAACACTTTGGAACATGAGATCCATTCTTCT-CATACATTATAATTAGCTGTCAGTTTCACCATGGACATTTTCCATGTGCACTTTGAGGTAGTCATTTCTTGTAAACTTCTTGTGGCAAAGCTGGCATTCTGCCATTGGTCGATTGGGATTATGAGTCAGCTTGTGTCGAATCAGCATTTTCTTCAGGCTGAAGGACAAATCACAAACCTAGGCCAGAC ..:x:...x....:..xx:.....xx.:...---------------..:x..::..:...:x...:-----..::........--:..:.....::.x------....:x..--..:.x...:x...:.---.x.:x....:.:.-..xx.x:...---..........:.x.........:...x..........................:..............:.......:..............xx..x...................x..............................:..:.x................:xx.... 31M15I20M5D12M2D13M6I8M2I15M3I13M1D10M3I175M 238/297 80.1% 326/94230402 0.0% 37/297 12.5% 82318625 NA +3108 chr4 + 190214555 120707537 120707536 120707590 54 TAAAACTATAAGACTCTTAGAGAAAAAAAACAAAAACAAACAAAAAAAAACAAC chr4 - 94230402 6076386 6076385 6076439 88153964 88153963 88154017 54 TAAGACTGAAACCTTCTTAAAAAAAAACAACAAAAACAAACAAACAAAAAAAAC ...:...:x..xx:.....:.:.....x................x.....x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 114631151 75583404 +3292 chr4 + 190214555 120710192 120710191 120710266 75 CATTCCAGCAATGCAACACACACACACAGACACACACACACACACACATACACACACACACACACCCCTACTTTC chr4 - 94230402 93909762 93909761 93909834 320569 320568 320641 73 CATTTCA--AATGAGGCTTGCACACTTGTACACATATGAACACACGTATACATACACAGACACACCCCCATTTTC ....:..--....x::.x::.....x::x.....:.::x......::.....:.....x.........:.:.... 7M2D66M 52/73 71.2% 73/94230402 0.0% 2/73 2.7% 26800430 NA +8278 chr4 + 190214555 120710302 120710301 120710471 170 AACTCACATCACACTGAAAAGGCTTTTCTCCAGTGTGCGTCCTCTTGTGCTCATCCAGGCCTCGCTTCTGGCTGAAGGCCTTGCTGCACTCTGAGCACTTGTACGGCTTCTCCTGCAGTCAACAAAAAGAGACCACCAAAATTGCCAGTGAA--TGAATGAATGCAGAGTCC chr4 - 94230402 38381856 38381855 38382014 55848389 55848388 55848547 159 AACTCACATCACACTGAAACGGCTTCTCTCCGGTGTGGGTTCTCATGTGCTCATCGAGGCCTCGTTTTTGACTGAAAGCCTTGTTACACTCAGAACATTGGTATGGCTTTTCCTGT-----ATGAAATGACAACA--------GTGAGTGAAAGTGAGTCAACACAGAGCCC ...................x.....:.....:.....x..:...x..........x........:..:..:.....:......:.:.....x..:..:.x...:.....:.....:-----.::...x..x.x..--------.:x......--...:.x..::.....:.. 116M5D14M8D9M2I18M 125/157 79.6% 159/94230402 0.0% 15/157 9.6% 82328446 NA +3035 chr4 + 190214555 120727931 120727930 120727991 61 ATCTCAGTAAGAAAAAAAAAAAAAAGAGAGAGAGAGAAAGTACCAGTGAAGAACATCAGAT chr4 - 94230402 29273166 29273165 29273226 64957177 64957176 64957237 61 ATTTTGATAAGAACAACAAAAAAAAGAGAGAGAGAGAAAGATGCAGTGTAAACAATAAAAT ..:.:::......x..x.......................xxx.....x.:.xx..x.:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 91454765 NA +7869 chr4 + 190214555 120754548 120754547 120754658 111 CTTACCCTGGTGTGAGTACGAATGTGCATCTTCAGTCCATCATTTTTACTGAATCCTTTTTCACAGTAAGGACATTGATAGGGACGCTCACCTACAAATAAAGGAAGCCTC chr4 - 94230402 38393435 38393434 38393545 55836858 55836857 55836968 111 CTTACCCTTGTGTGGGTGCGAATATGCATCTTCAGTCCATCATTCTTGCTGAAAGCTTTGTCACAGTAAGGACACTGGTAAGGACGCTCACCTGAAAATAAGGAAAGCATC ........x.....:..:.....:....................:..:.....xx....x..............:..:..:............:x......:.:....x.. 111M 94/111 84.7% 111/94230402 0.0% 0/111 0.0% 82361113 NA +17365 chr4 + 190214555 120765229 120765228 120765684 456 TAAGACAGTGATTTATTACTATATTCAAATAACAATGTGTAAG-CAAGCCTAGAACAGAAGGGCCTACACAGTCGGTATCTATTAACACAGAAAGCTGGTTGGAACTGTAGGCAAGTAATTAACCTTCTGGCCCAGAGCTTTAAAAACCCAAAAGCAGTTCCTAGAATTTCTTCCATAATTTATGAACAACTGATGGAATTCATGTCACAGTCCGTGGATTCCCTTGCTGAATTAACCTCAGCTCTCACTGACCCTAAGAAGCTATAAACCAACA-------------GGAGACTGTGCTCTACTATTTCAGCTGACCCACAGAGTGCCATCTCTGTTGTTTC-AGCATAGGAAGCCGGATGATAAATTACAGAGC----TGCCCG--CCAGGCACAATCCTGAA-CATTCCCCTTCAATGAAGATGACAGCAACACACTGTACATGCACA----TTCACTCACCCTAAACCAGCCCTGTTT chr4 - 94230402 38401935 38401934 38402384 55828019 55828018 55828468 450 TAAGACAGCAATT----AACAGATTTTAATACCTATGTGAAAGGCAACTGCAAAACTGCAGAAAC--CACAGCCAGTAACT---------GAAAGCTGCTTGAAACTTTAAGCATGTAATTAACCTCCCAGCCCACAGCCTTCTAGCCCAAGGAGCAGTCCATTGAATTTTTTCTACAACTTATGAACAAGCCAAGGAATTTACATCACAGTCAGAGGATTCTTTTGCTGAATTAACCCCATCTCCCTCTGACCCTAAGAAGCCATAAACCAACAGGATACAGCAGAGGGAGAATGTGCTATAGTGTTTCAGCTGACCTACAGAGAGCTGTCTCTGTCATTCCAAGGCTGGAAACCCAGATGATGAATTACAGAGCAAAATGCTTGGTTCAGATGCAAACATCAACCACTTCCCT----------------CTACACA-TGCACATGCAGACGTGTTCACTCACCCCAAACCATCTCAGTTT ........::...----.x:.x...:x....x.x.....x...-...x:x:.:...x.x..::x.--.....:.:...x..---------........x...:....x..:...x...........:.::.....x...:..xx.:x..x.::......:.x.x......:...:.:..:..........x:x.x......:.::........x.x......::..............:..x...:.x...............:...........-------------.....x......x..x.:............:......x..::.......::..:.-..xx.:.:..x..:......:...........----...::.--:...:::...x.x.x..-..:.:....----------------.x.....-..:.......x.----...........:......x.:.x.... 13M4D26M1I21M2D14M9D185M13I55M1I32M4I6M2I17M1I9M16D7M1D12M4I27M 325/424 76.7% 450/94230402 0.0% 58/424 13.7% 82363294 NA +3113 chr4 + 190214555 120774902 120774901 120775022 121 ATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATATATATACACAAACACATATATATATA chr4 - 94230402 2492108 2492107 2492228 91738175 91738174 91738295 121 ATATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCACAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATA ......::x:..........x.x.:.......x.x.:..x.:x.x.x.:.xx..::.....:...x..:.:xx.x:.:.x.x.x.::.:.x.....::xxx..:..:x.x.:....x.... 121M 74/121 61.2% 121/94230402 0.0% 0/121 0.0% 118282794 71931761 +3235 chr4 + 190214555 120774902 120774901 120775022 121 ATATATGTATATGTATATGTATATATATGTATATGTATATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATATATATACACAAACACATATATATATA chr4 - 94230402 2495706 2495705 2495826 91734577 91734576 91734697 121 ATATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCATAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATA ......::x:..........x.x.:.......x.x.:..x.:x.x.x.:.xx..::.....:...x..:.:xx.x:...x.x.x.::.:.x.....::xxx..:..:x.x.:....x.... 121M 75/121 62.0% 121/94230402 0.0% 0/121 0.0% 118279196 71935359 +3154 chr4 + 190214555 120774938 120774937 120775023 86 ATATATGTGTGTGTATATGTATATGTATATATGTGTGTGTATATGTATATGTGTATATATATATACACAAACACATATATATATAA chr4 - 94230402 8395788 8395787 8395873 85834530 85834529 85834615 86 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ..:.:...:.....::..:x.:......x..::.:...:.::x.::..xx:.::.:.:.:.:.:.....:.....x..:x...x.. 86M 53/86 61.6% 86/94230402 0.0% 0/86 0.0% 112379150 77835405 +7498 chr4 + 190214555 120777170 120777169 120777315 146 TAATTACAATCTCCATACCTGTGTGGCTCCGGATATGAACTCTGAGTGTACCACTGCTGGCAAATTTCTGGCCACAATATGGACAGATTTTCTCCTTTTCTCCTGTATGTGTCTAAAAGGAAAGGGATAAAAAGGCTAAGGATAAA chr4 - 94230402 38406014 38406013 38406155 55824248 55824247 55824389 142 TAATAAGTATCACTGTACCTGTATGGCTTCGAATATGAACTCTCAGTGTTCCATTGCTTGCAAATTTCTGTCCACAATATGGGCAAATTTTTTCTTTTTCACCTGTGTGAGTCTACATGAAGTGAG----GAAAGATGAGAATGAA ....x.xx...x.::.......:.....:..:...........x.....x...:....x...........x...........:..:.....:..:.....x.....:..x.....x.x.:.:x.:.----:..:.x.:..:..:.. 126M4D16M 109/142 76.8% 142/94230402 0.0% 4/142 2.8% 82371156 NA +11010 chr4 + 190214555 120781133 120781132 120781311 179 TTCCACTTACTTTCTTATGACTTCTAAGCACTGAAGGTGTAACAAAGGCCTTATTACATAGCTCACACCTATACTTCTTGTGTCTTTCATGAACCACCTGGACATGAACATTTAATGTATCCTTCCTCTTAAAGGTAGCATCGCAGTGATGGCACTTGAAAGTCCTCTCACCTTAGAAA chr4 - 94230402 38407120 38407119 38407298 55823105 55823104 55823283 179 TTTTACTCACTTTTTTATGACTTTTCAGGACTGAGGGTGTCACAAAAGCTTTGTCACAGAGATCACACTTATATTTCTTATGTCCATCATGTACAACTTGAATATGAACGTTTAAGGTGTCTTTTCTTTTGAAAGTAGCATCACAGTGATCACACTTGAAGGTCCTCTCACCTTATGAA ..::...:.....:.........:.x..x.....:.....x.....:..:..:.:...x..x......:....:.....:....:x.....x..x..:..:.:......:.....x..:..:..:..:..:..:........:.......x:........:..............x:.. 179M 140/179 78.2% 179/94230402 0.0% 0/179 0.0% 82374013 NA +9597 chr4 + 190214555 120784992 120784991 120785148 157 ACTTACTGTTATGTATTAGCAGGTGTCTCTGTAAAGAAAATGGGGTCCGGAACAAAGCTTTACATTCTTCACATTGGAACGGTCTCTCCTCAGAGTGGGTCTGCAGAGGAAAAACACTGAGTCAG----GAGGATCTAG--AATCAACCA---GTCATTACAATGA chr4 - 94230402 38408473 38408472 38408638 55821765 55821764 55821930 166 ACTTACTGTTATGAATTAGTAGATGTCTTTGTAGAGAGAATGGGGTTCGGAACAAAGCTTTGCATTCCTCACATTGGAATGGTCTCTCTTCAGAATGGGTCTGCAGATGAAAGACAACATGTCAGAGGAAAGGCTCAGGGAAATCAATTAGCTGTCATTACAGTAA .............x.....:..:.....:....:...:........:..............:.....:...........:........:.....:............x....:...x::x.....----:...x..x:.--......::.---.........:.:. 125M4I10M2I9M3I13M 131/157 83.4% 166/94230402 0.0% 9/157 5.7% 82376519 NA +10873 chr4 + 190214555 120796336 120796335 120796688 353 GCTTTCCAGTTTGGAAATTACAAGCATCATTGTTTCTATGCTTCCCAAGACATCATTATTACTTTTATATGATTTATGGCTTAAAGTATGAGAGATGGTGCAAAGATCCTGTGCCAAATTCCCATATGGCATATAACATGAGCCAAACTGTGAAAAACTCATAAATGTGGATAGATCAGTTTCATCA------GAGAAAGGAATAAGAGGGTTCCAGAGACTAAACAGGAACTA--GCCAGATAA--------------------------TTTTTTACAGTCACGTAATTCCAAAGCAGCAGTAATGAACGCAGTCCTGCCCCGAATGTACAAT----GCTTGAGGTAAACATAAAGAT-GGTAAGGAAGAAATTAGGCAGAGACGATTTA chr4 - 94230402 38414650 38414649 38415031 55815372 55815371 55815753 382 GCTTTCTCCTTTAGA-----CCATCATCACCATTTCACTGTATGA-GAGGCATTATTATTATTCTTACATGATTTATGGCTGAAAGTGCAAAAGATGGTGTAAAGATCCTGTGCCAAAATCCCAGATGGCATACAACATGAGCCAAACTGAAAAAGACTTCTAAGTAAGGGTATATCAGTTTCAACAAGAGGGGTAAAAAGAGTGGGAGGATCAAAAATATAAAAATAAAGATAGTGCCAAATACTGGTTGCAAAACTAGAGGGTTTTTTTTTTTTTTTTGTCTCTTAATTCTGAAACAGCAGTCATGGATACAGCCTTTCC----ATTTAAAATGTAAGTTCAAGTTAAAATTAATGACAGGCATTATGAAAATTTGGTCAAATAGATTTA ......:xx...:..-----.x.x.....:::....xx..:x.xx-:..:...:.......:.:...:.............x.....:::.:........:.................x.....x........:................x:...:...:x...:.:x..:..x..........x..------.x:...:..:.::....:.:xx.:.x.:x...xx::.:x..--....:...x--------------------------......x:x...x.x......::..:.......x...:.::...:.:.x..----..x..x...----.:.::..x....xx...x..:-..:.xx:x::.....x..:x:.:xx...... 15M5D25M1D141M6I41M2I9M26I51M4D9M4I21M1I31M 241/343 70.3% 382/94230402 0.0% 49/343 14.3% 82381686 NA +16134 chr4 + 190214555 120798194 120798193 120798725 532 TTTATCAAAAATAAAAATTGAAAATCACAG--CAGCAAATTCATAAAAAATAATAATAATATTAATAAGTTTTACCTTCTTATGATTCTTGTAAACATTTCTGTGGGCAAATCCCTTTCCACAAAGTTTGCATTTGTAAGGTTTGTCTTCGCTGTGTATTACTTTGTGAGCACCCACTTGATCAAGCCTCTTGAAAGACTTATTACAAATCTCGCAATTATAGGGTCGTTTTTCTATTAAAAAAATGAGTGGAGA-----CAATCTCATATCTATATAAAGGTAAAGGATAAAAG--AGAAAACACCCTTACCTTATATTACTTCTTACGG-TAAGAAAACTAAAGGATGGTCAAA-CAACTA-AAAAACATCTACCATCC-ACATAATAGACACATAAATGTGTCTACTCCTAAATGAAATATGAGCT-TGTTCTCTTACAG---------ACGTATTTTG---------------------AATTTTTA--AAGTAGCTTAGATATAAAGAAAAGGTTTACATTCAAGGAAGGACTC-CTATTTCCAGATGAAAACCATGCTGATATG--TGACAGTTT chr4 - 94230402 38415578 38415577 38416138 55814265 55814264 55814825 561 TTTAAAAGAAAAAAAATCTGCAAATCTGAGGCTGGCAGATCTGTAAACAACAACAGCAGAGT------GCTTTACCTTCTTGTGATTCTTGTAAACATTTCTGTGGGCAAATCCCTTTCCACAAAGCTTGCATTTATAAGGTTTATCTTCACTGTGTATTATTTTGTGTGCAGTCACTTGATCAAGTCGTTTGAAGGACTTATTGCAAACCTCGCAGGTGTAGGGGCGTTTTTCTGC--AGAAAATGAGTGGGGGACATTTAATCTCCTGTTTATACAGGGGGAGAAGATGAAAGGCAGAGACAGTCATCTCCTCAGAGAGATTTCTGCAATTAAGTCAACCCAATTAAGATTAAACCAATTAGAAAGACATCTAATGCCCTTTATGTTAGACAGTTAAGT-----CACTTC---ACAAAAGATGAGCCATGGTGTATCTCAAGAAATTGGCACATTCTTTGCAATAATCATTGCTAAAACTAAATTCTGATTAATTAGCTTAAATCAAAAGAGAA----TGACTTCAAAGAGGAAAACACTGTTTCCAGATTACAAATGTGAAGGAGGGCATGACAGTTT ....xx.:...x....x:..x.....xx..--::...:..:::....x..:..:.::.:x:.------.:...........:............................................:........:........:.....:..........:......x...x:............:.x:.....:........:....:......:x.:.....x.........::--.:...........:.:-----:......x.:.:....:.::..x.:.:...:....--...:.xx::.x.:x...:.x.xx:x..::.:.::-....xx...:x..xx.x.:.:...-...:..-...:.......x:::..-x:..:x......xx...:.-----:...:.---.::...x......:-..x.x.x.:x..:---------..:.x:....---------------------....:.x.--..x.......:..xx.....:..----.:xx.....:..:.:.xx.-..:.........x.x..x::..xx.:x:x.--......... 30M2I30M6D169M2D16M5I35M2I34M1I24M1I6M1I17M1I19M5D6M3D14M1I13M9I10M21I8M2I23M4D19M1I30M2I9M 370/512 72.3% 561/94230402 0.0% 69/512 13.5% 82382616 NA +7166 chr4 + 190214555 120799652 120799651 120799812 161 ATAGTTTACCTGAGTGGGTGATCATATGACGTTTTAGCTGATTAGCTGAAATAAATTTCTTCATACATTCTTGACAATCAAATATCTCATGAATCTGCAAAA----GGTTAAATAGACAGTTAAATCAACTGTCAAAGCCTAGTAAATTACACAGCTCTCAAGCA chr4 - 94230402 38417078 38417077 38417237 55813166 55813165 55813325 160 ATATGTTACCTGAATGAGTTATCATATGGCGTTTTAGCTGGTTAGCTGAAATAAATCTCTTGTCACATTCCTGACACTCAAAGGTCTCATGAACCTGCAAAATGAGTGTTTAAT-GATAATTAAAT-ACCTGTCTCAAACAAG---ATCACATATCTTACATACA ...xx........:..:..x........:...........:...............:....xx:......:.....x.....x:.........:........----x...x...-..:.:......-.x.....xx.:x.x..---..:...:.x..:x..x:.. 102M4I8M1D11M1D16M3D19M 123/156 78.8% 160/94230402 0.0% 9/156 5.8% 82382574 NA +8499 chr4 + 190214555 120811348 120811347 120811510 163 GATGAATTTTTATCTTACTGACCTTTCTATGTTCCTGTAGGCTTGATGCTGAAGAACACTTTTTATTGCACACTGAACATATAAGCTTTTTCTTAGGATCTCCTAAAATAGAAATAAAATACCATGATGATTT--AAATGAGACTATTAAGAGGAAAAACAAATA chr4 - 94230402 38422548 38422547 38422712 55807691 55807690 55807855 165 GGTTAGCCTTCATCTTACTGACCTTTCGATGCTCCTGGAGATTTGTTGTTGAGGAACATTTCTTATTGCACACTGAACACGTCAGCTTTTTCCTAGAATTTCCTGAAACAGAAACAAAATACCACCAACATCTTAAAAAGGAAGTGCTAAGAAAGAACCTAAATA .:.x.:::..:................x...:.....x..::...x..:...:.....:..:.................::.x.........:...:..:....:...:.....:.........:x.xx..:.--...x.::.x.::.....:::..xx:..... 133M2I30M 121/163 74.2% 165/94230402 0.0% 2/163 1.2% 82388800 NA +24789 chr4 + 190214555 120816446 120816445 120818555 2110 TCCTCACCAGTGTGGACATTTTCCTGGTGTCTTTTCAGGGCATCCTTGCTCTTCAGCCTCTTTCCACAGCTGTCAGCCTTGCACACAAACCTGGCATCCCCCCGGCAAGTCTCCTGGTGCTGCTCAAAACTACA--AGACAACCAGCAAAGCGGAACAGGAAGAAATGGTGAAGACATACCTACAAAACTCAAACAT-CAGCAAG-ATTTTG----TAATACATGCTCCCTAGTAGAGTTTCGGGGTCATTCCATGCATTACCTAT-GCAGGTAAGAAGAAAAGCATTTAAATTCTGTAGGTATGTGAAACTGAAT-TACTAAGAAGCATGAAAGTATGCATGCAAAAAATGACCCACAATTATATAACAGCCATTTCATAACTCAGACACAAAACCTCGATGCTGAACTGAAGGAAGAATTGCAAACAGAGCACTGAAAACTTCGCGAAGACTCCTTTAGACTGCTTTTCGCTGTGCACTGAAGAACACTAAAGGGAAATAGGAAAAAGAGAAAGAAAAGAAAACAAAAACTGGAACTCTAAGACAAAAATGAAACTACACTAACTCTGAATAAAGTCATGTTCGTGATCCCTTTTTTCATTGTCTTTTGCCTTTTTAAATTTTTAGCAGTACCTTAAC-TATAAGCTCTTGCTCAGCAGTGTCTTTTGTATAAATATAT-AATACTAAATGCAATAA--AAGCTAACCAGAATGCAACTTAACATCTATTTATTTAAAAGCATATAGTCCTTGCTTGTTTTTTAAGGAAGTACAATAGAATTTCTAAATATGTAGTATCCTGCTATTATAAAAGTTTTGATATTCTGAACATTTATTAAGTTTTAAGCACAATTTTCATCTCAATTTTTATAAGCAAAAGTTGATGCATATAATAATATTCATACAGTCTTAGTATGAAATGTAGCATATTTCAGAATTTTAGTTCA------ATGAAACACAAAAATGT------AAAAATGTAACATTAAAGCCTATGTTAAAGATTTCTTGCTCATAAGTAAGGTAACATTCTGTTAAAATGAGAAGCTAAGGTTGGAGAAAGAAAGTAAATGGCAGGATGGGAGCACATAAGAGAAGAGATATGTTGATGAGATGGGACAATTTA-----CATTACT----TTCATATTGGAAGTAATTGGCTTCAACACAATGAGAGTCTACAGTTGCATCCAATATGTAAATATGCTTTTAAATTACTTAAATTCAATTATCTGATTAAAATTACAAACTTTAATGAGTAAAAAAATAAAACTTTACAAATGCA-TATACCTACTTTCTCACTTTTAAC--AATTTCTGATCCTGTAAAA-----------TATTTAAATAAAGATAATTTTATGTTGTTAATATAAATTGTTAAAATAAAAAAGGGTACAGAGCTATGTGTGGGATCATCTAATTAATCATATTGTTATAACTGGGACCTATGCATCTTTAAATTATTCCTCCAAAGTTGCTCTCAAATAAACAG-TGCTTCCCAAAATGTCCAGGAATTCTTTATACTTTGAACTCCCCATTTCTTAAACTTTTTTTTAAACAGATTCCAGAAGGAATATAAAACGTAGACAACTAAAAGTCTGTTACCTCAAAGGAGTAACTAAAGTAGGCATATCTGAATTTCAGATTAAACCAGTA-----AGCTTGATACATAATGG------CAAATTAATAAATGGACAAAAACTAATTACCATAAACAGTGTTTATGTGTTAAAATCCATAATTTGAATATTTTAAT--AATCAACATACTATACTAAGAAAAGAT---GAGTTAATGACAATACCAATGTAAAATGCTTAATCTCTCATTCACACACAAAACATGCGCGT--------------GCGCGCGTGCACACACACACACACAGGTTAAAAACTATGAGTTAAGCTGAATGGAATAAACTGTGTTAGCTTATAATTTTAAAGATATTTCTTTAATATACGCACTGTCTTTGCAAAGCCTGCTTAACTGGGAATTTCTTCCCACAGTTCTTGCACTTAAATTCTTTCTCCTCTGTGGGTTTCTGGTGCAATGTCTGGAGATGCTCAGCAAGAATATCCTCACTGGTAAAACTCGATTCACATTGAGGACAAGCATAGTCCTCTTTACAGCCAAGGCGATCTGCACATTCACAAGGAAACATATTCAT chr4 - 94230402 38426384 38426383 38428240 55802163 55802162 55804019 1857 TTCTTACCACTATGAACATTTTCCTTATGTTTTTTCAGGGCATCCTTACTCTTGAACCTCTTCCCGCAGCTATCTGCCTTGCATATGAATCTGGCATCCCCTCTGCATGCCTCCTTGTGCTGTTCATAACTATATGGGATAATCAGCAAAT---AAAAATAACACATGACGCAG---TGTATGCAGAAATCAGACATATAGTAAGTACTCTGAGCTTTACACGTGCTGCACTGCAGAGTTCCAAGGCCACCTCATGCATTACTTACAGCAAATAAGAATGAAAGCATTTGACTTCTTTCATTGTTAGGATTCACATACACTAACAAGCTTGAAAGCTAACATGCAAAGGAAGGCCAGCAATGGTATGACAGCAGTCCAGTAACTCGGACACAAAACCTCGATTCTGAGCTGAAGGAAGTATTGCAAACAGAACACTGAAAACTTCTTGAAGAGTCTCCTGGGTTGATATTCTCTGTGCACTGAAGTACACTaaat---------aaaaagaaaaataaaaaataa--------------------------------------------aaataaGGTGA-----------CCATTTTACAA---CTTACGCAGAATTGAAGT---AGCAATAGATCAAAATACAAACATTT---------------------CAATATATGAATAACCAATGCAACATCTGAGGTGCCCTGAA---------------ATTTAGTGGGA-----------------------CTAATCAAGTGCA----------TGAACATGAAGAGTTGTGGTCTTAT-------------TGCTGTATCCTGATTAATTTTACTGCATAATGTT--TTTTACTTTTCATA--------TTACTGCATAACATA---TTCA------CTTAACCGGCTGTACAACACAAATCCAGCTCCCAATTCAGACTAGAAGAAACATGTCAATGTTCAATAAAAAATATTTAATTA---TCTCCACCAAATATTTCTC--------------TACTATTTTTTTTTTAT-------CTATTTCCATGAAAGAACATA-------------GAGCTCATAA-------------------AGAACTGCCAATTTAAGAAACATTATTGCTATTCAGACACAAGAAAAACCAATTTATTACAAGAGGAGT-----GTTGTAATACACAACGCAACATGAGTCTC--TTTCTGACATGCAAGAGTTGGATTAAATGTACTACTT-------ATAAGAAGATA----TTTGGACATCCAGTATACT---------ACCTATAATTAAATGTATAAT-----AAAAAGGAATATATCTATTTAATTGCAGGCAAATATATATACCTAA-ACAAG-----AAAAGAAGAAAATGTTGATATTTTTGTATAAAAACATAATGTAAGACACATGACTTTAG-TGACAAAACTGCATTTTTATACTA-----CCAAGGATA-----GAATAACGAGACACACTCTTAAAT---CTGCTATCTTTTATGGTTTG---TTTGTTTTTTTTAATCCAAATATTTAATTAATTC-------AAAATAAAGTATGGCT--TTTCCTTTCTATTTCTTTTTAGAA-TATCATTCATTTTTTTTTCTAAATCTCATTCTAATTCAGTAGTGGCAATTCCAGCTAAAACAGATCTCTTAAACTATTAAATAACC----------CACTCGAGATGGAGATGAAGGGCTC---TGCACCACTCAGTAGCTTTAATCGGACTTACAGTATATGTTTTGAAAATATTAAAAATTAGTGACATTTTTAATTCAAATTGA--AGTCTCCAACAAATACAGGAAACTAACATATTAAGAATTTATTAGAAGAGTGAGGATACAAATAAAAA-AGAATAAAAATTAAATGAT----TGAATGAAAAGGA---------------ACTCTGAAAAACATTCTTGTTTCTACTCACTGTCTTTGTAGAGCTTGTTTAACAGGGAATTTCTTTCCACAGTTTCGGCACTTGAATTCTTTTTCCTCACTGGGTTTTTGGTGCAATGTCTGAAGATGTTCAGCTAGAATCTCCTGGCTTGCAAAACTGGACTCACAGTTTGGGCATGCATGGTCCTCTTTACAAGTGAGGGGATCTGAATGATTGGAGGAGAAAACACTAAT .:..:....x.:..:..........x:...:................:.....x.:......:..:.....:..x........:.::..:...........:.x...x.:.....x......:...x.....:.--:..:..:.......x---..x.:x..x.x...::.x..---.::x.:..:..x...:....-:..:...-.:.:..----.x.:..:....x.x:x.:......:.::..:..:::..........:..:-...::......x:.........:.x....x.x:x.:.xx.:.x:::x..-:.....x....x......:xx:........::.x.:..x:....x:...:.....x:.::x:......:................x....:..........x............:.............x:.....x..:::.:.::..x.x...x.............x........x---------.......:...x....:.x..--------------------------------------------:.....:..x.-----------..x....x..x---...x:..xxxx..:..x.---....:..xx.:..x-..:..:.x:..---------------------x.......-....x:x.......:.x--:..x.:x..x...---------------.....x.x::.-----------------------:...xx....:..----------.:..:...x..x:.:x..x.x....-------------.x...x.:x:.x.....x...xxx...:...x..--.:.:.x....:...--------..:x......xx...---....------....::xx.xx:.::.:..:.xx..x::x.:::.:....------.x......::xx.....------......:.xxx....---:..x::::...x......:--------------..x:...:.x..xxx..-------:x.xx.:x:x.......x:..-------------....x.....-------------------...xxx.x.......-----.....:.----....x.:xx:.::x..x:x:x..:.x:....x::....-----....:.x:xx.:.xxxx..:...xx.:.x--..x..x.x..x...xx:.:x.......xx...x.x:.-------:...:..:...----...:x.x..x..-.....:---------..:.x...:--...x.x.:..-----....-----------.......x.:x..::..x.x...:.xx:...-.:..:-----....x..:...:x..xx.x.x:.x...:.:::.x...xxx:.x.:x..:..x::.x..:-..:x.xxxx.....:....x.:..-----....:.x.:-----:.....xx..-::.x::.:x....---.x.xx..::.....:x....---.::x:x...:....x.:xxx.x..x..:x:....-------..x.....:::.:.x:--:.xxxxx...:..x.:.:xx..:.-..x.xxxx:.xxx:x.x...:...:...xx:...x:.....-----.::.:x.xx:.x..::.------:...:..x.....::x.----------:..:xx.:.::.x.x.x.x.x.:.x---.x..:x.:.:::xx::......--:.::x...xxx...::.xx.....x..---:.:...:.....x.x::...x:...x..x--.:....:x.:xx.:...x:....xx:.:::.--------------:x.x.:.x.x.:...x.:.x.x.-..:x......:..x:x.x.----......:..x::.---------------.:.:.:..:.xxx.....xxx.x...x...........:.:...:..:.....x...........:........::x......:........:.....xx.......:..............:.....:.....x.....x....x:..x.:......x..:.....x.xx..:..x....:............:x::...x......x.::x.::x.:.::..x.:.:.x.. 134M2I15M3D20M3D20M1I7M1I6M4I50M1I49M1I178M9D21M44D11M11D11M3D18M3D14M1I11M21D8M1I17M2I13M15D11M23D13M10D25M13D34M2D14M8D15M3D4M6D39M6I17M6I15M3D19M14D17M7D21M13D10M19D15M5I7M4I38M5D29M2D37M7D11M4D12M1I6M9D9M2I10M5D4M11I31M1D5M5D59M1D24M5D9M5D10M1I13M3D20M3D34M7D16M2D24M1D41M5I17M6I17M10D25M3D22M2I27M3I29M2D31M14I23M1D19M4D13M15D233M 1165/1777 65.6% 1857/94230402 0.0% 413/1777 23.2% 82390062 NA +7893 chr4 + 190214555 120821112 120821111 120821355 244 AAACTACACTTTTTTCTACAACTTTTCTTCTCCCAGATCACCAATTAAAGATGCAATACCTTTTCTGCCCGCT-GTTGATTGTCTTCTAGAATTTTCAA---CTTCCCCTTCTTTGATGACTGTCATAATTTGCTGTTCTTCCTCCTCAGCCTCCATGTCACTATCCAGGTAGCCAATCAGAAGCTCCGTGTCTGTTTCTATATCTTCAACTGCCAAATAGAAAATGTTTTCTCCTTCCTGAAACAAA chr4 - 94230402 38430618 38430617 38430841 55799562 55799561 55799785 224 AAGCTATACTATTTTTTACATATT-----------GCTCACC---------TGCAA---CTTTTTCACCAGCTAGTTGCACCTCTT-TATTGTTGCCACTGTCTTCATCTTCCTGGATAACAGTTACTTCCTCCTCATCCTCCTCCTCTTCTTCCATGTCACTGTCCAAGTAACCAATCAGAAGTTCTGTGTCTGTTTCAATATCGTCCACAGCAAGATAGAAAATATTTTCGCCTTCCTGTTGCAAA ..:...:...x....:....xx..-----------.x.....---------.....---.....:::..x...-....xx:x....-..xx:..x:..x---....x:....:.x...:..x..:.:xx::.x..xx..:........xx.:...........:....:...:...........:..:...........x.....x..x..x..x.:.........:.....x........xx:.... 24M11D7M9D5M3D14M1I12M1D12M3I146M 164/220 74.5% 224/94230402 0.0% 28/220 12.7% 82390494 NA +8317 chr4 + 190214555 120853410 120853409 120853550 141 AAGCTCACTTGAATGGCAGCCAAGTTCTTCTGCTCCTGAGATGGTGCCTCATGAACGAAGCGAAGCCAGTTGGAGTGCCGTGGGTTGGTAGCATCCAAAATGTACAAAACTTCTCCCTTACTCCCACGAACCTGAAACATT chr4 - 94230402 38441431 38441430 38441571 55788832 55788831 55788972 141 AAATCTACCTGGATTGCAGCCAGATTCTTTTGTTCCTGGGATGGAGCTTCATGGACAAAACGCAGCCAATTAGAATGGCGTGGATTGCTTGCATCCAGGATATAAAGGACTTCACCTTTACTGCCACGAACCTGAAACATT ..::::..:..:..x.......::.....:..:.....:.....x..:.....:..:..:..x.....:..:..:..x.....:...x.x.......::..:..x.::.....x..:.....x.................. 141M 107/141 75.9% 141/94230402 0.0% 0/141 0.0% 82411979 NA +4760 chr4 + 190214555 120858119 120858118 120858429 311 TATTATTTATTAA-ATAAAACATATTTCCCTTTTTGTCTTTCAACAAGGC-TCTTCAAAGAAAGCAGTTT-TAAGCACTAAA-ATTTAGAGTATGGATGTCTTTAGAGTATAAAATGCCACCATGTTTTTGTATTTAAATTACAGGCATTCTTTCTGCAATTGTTTTTAACTAAAGTAAGGCCATATGCCTTGCCTTCAG-TGTTTAA-TTATCCAGAC-TTCAGGATATCTTTAGGAGCACAAAAAAGCAAGTGTGCTCAA-----GTAGTCAATTCTGACGGCACATTGTTTGTCAGATTTAAACCAAAGGGAGACACACT chr4 - 94230402 38444545 38444544 38444843 55785560 55785559 55785858 299 TATGATTTATTTATATGAGGAACA----CATTTTCATCCATCAACAAGAAGTTTCCAGAGTAGGTATTTCCTAAGAGCTAGGGATTTCAGCTATGCAAGA--TCAAAAT-TAGATTGTCATCATGGCTTTGTATTTAAATTGTTCACATTCTTGCTGTATTTGTTTTTTACAGATGCA-----ATATGTCTTAAGTACGGCTACTTAAGTTACCTACACTTTTAAGATATTATTAGA---ACAAAA----AACTGTATTTAATTATCATAATAGCTGATGACAGCATGTTGTTC-TCAGATTGATACAA----GAAACATACT ...x.......x.-..:.::x.:.----.x....::..:x........:x-.:.:..:..x.:.:.x..:-....x:...::-....x::x....x.x.x--.:.:.:.-..:.x..:..:....x:..............::xx:.......x...:.x........x..x:.x.:.-----.....:...:xx.x.:.-.::....-...:.:.x..-..:.:.....:x....:---......----..x...::.:..-----:..:.x:x.xx....:...::.....:-.......x.x..x.----..:...:... 13M1I10M4D22M1I19M1I11M1I17M2D7M1D68M5D17M1I7M1I10M1I17M3D6M4D12M5I27M1D14M4D10M 196/287 68.3% 299/94230402 0.0% 36/287 12.5% 82413574 NA +3029 chr4 + 190214555 120863156 120863155 120863213 58 TAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 60979352 60979351 60979409 33250994 33250993 33251051 58 TAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ......x...x.....xxxx.......:.:...................x.x.x.x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 59883804 NA +3265 chr4 + 190214555 120863156 120863155 120863223 68 TAAAAAAAAAAAAAAAAAAAATATATA-TATATATATACACACACACACACACACACACACACACACAC chr4 - 94230402 60979341 60979340 60979409 33250994 33250993 33251062 69 TAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ........x..x.....x...:.x.x.-.x............:.:.:.............x.x.x.x.. 27M1I41M 54/68 79.4% 69/94230402 0.0% 1/68 1.5% 59883815 NA +3140 chr4 + 190214555 120863157 120863156 120863212 56 AAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACA chr4 - 94230402 70707584 70707583 70707639 23522764 23522763 23522819 56 AACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..x.:.....x.::....::x...............:..........::..x.x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 50155573 NA +3003 chr4 + 190214555 120863158 120863157 120863208 51 AAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACA chr4 - 94230402 70707589 70707588 70707639 23522764 23522763 23522814 51 AAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .....x.::....::..x...............:........::..x.x.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 50155569 NA +3181 chr4 + 190214555 120863158 120863157 120863217 60 AAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 60979350 60979349 60979409 33250994 33250993 33251053 60 AATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ..x.....x...x.....x.x........:.:...:.:.............x.x.x.x.. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 59883808 NA +3200 chr4 + 190214555 120863160 120863159 120863247 88 AAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACACACACACACACATATATATGTATATATATATTT chr4 - 94230402 87372724 87372723 87372795 6857608 6857607 6857679 72 AGATAAGAGAAAAAAATTATTTC----------------CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT .:.x..:.:.......x...x.x----------------..x...........x.........:x:...::......::......... 23M16D49M 56/72 77.8% 72/94230402 0.0% 16/72 22.2% 33490436 NA +3055 chr4 + 190214555 120863170 120863169 120863233 64 AAAAAAATATATATATATATATACACACACACACACACACACACACACACACACACATATATAT chr4 - 94230402 8395806 8395805 8395869 85834534 85834533 85834597 64 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ...x.x:...x..:....:...:.x:...:xx.:.................x.....x..:x.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 112467364 77747191 +3184 chr4 + 190214555 120863180 120863179 120863252 73 ATATATATATATACACACACACACACACACACACACACACACACACATATATATGTATATATATATTTGCTCT chr4 - 94230402 66904847 66904846 66904919 27325484 27325483 27325556 73 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCT ......:..::..........:...........:.:x:.x::x..x:.:....::xx:...:::....x.... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 53958333 NA +4152 chr4 + 190214555 120877386 120877385 120877517 132 ATTTGGCCAGCTGCTGTGATAACCACATCATGTTCCTGGGATAACTGTGCAATTTAACAATTCAGTTGCTT-----TTCCATTCCTGGACTCAATTTTTAACTCCAGGCTGCTAGAAGAATAATTTATATTAAAATA chr4 - 94230402 38451668 38451667 38451804 55778599 55778598 55778735 137 ACTTGGCTGGTTGCTATGACTGCCTCCCACAGTCTCTGGAATAACCATTTACTTGGACTGTTTTACTTCTTACTTTCTGCATTCCTGGTCTCAATTTTCAACTTAAGACTACTCCCAGCATGATTCAAATTATAATA .:.....::.:....:...:x:..x.x:xxx..::....:.....::.x:.x..x:..x:..:x::.x...-----:.x.........x.........:....:x..:..:..xxx..x..:...:.x....x.... 71M5I61M 85/132 64.4% 137/94230402 0.0% 5/132 3.8% 82425718 NA +6698 chr4 + 190214555 120907469 120907468 120907621 153 CTCACCTCCCACATCAACCTGTAATCCATATTTTCATCCAAGTCTTCAGGCATTCTCTTCTCTCCAGCAAAGGGTCCGAACTTTTCACCCTGAGTAGCAATGATTAT-ATTGAACAAGGATTAGT------ACAATAAATCAACATACTAAAATAAACGA chr4 - 94230402 38453358 38453357 38453514 55776889 55776888 55777045 157 CTCACTTCCCACATGAGCCTGCAGTCTGTGTTCTCATCCAGTTCCTGAGGCATTCGCTTCTCTCCTGCAAAGGGGCCAAATTTTTCACCCTA---AGAAATGATTATAAATGAAAATGAATCAGTGGGGACACaaaaaaagaaaaaaaaaaaaaaaaaga .....:........x.:....:.:..::.:..:.......:x..:.x........x.........x........x..:..:..........:---..x.........-.x....x.x.:..:...------....x...xx..x.x.xx....x...x.. 92M3D12M1I17M6I29M 116/150 77.3% 157/94230402 0.0% 10/150 6.7% 82454111 NA +9893 chr4 + 190214555 120922347 120922346 120922630 284 CCCCGCCGTGCCCCG--CGGTCCCCGGCCTTCCCACGGACGCCTGGCCCGGC-----CCGGGCGAG----GGGCGACCGGGGTGAAGCCCGCCGCGCCC---CGGGCCCTGCGGCAGGGCGACTCCGGGAGGCACAGGGCGCGCGAGGTGCAGGGGCGCGCAGGCCGCCGCCGGGTCACCCACCTTTCGCACTCTGCGGGCCGTGTAGAGCCCCATGCCGTCCTGAACCCGGGAGGACTTCAGGGAGAACCTGTCCGGCACGTACATGCCCAGCATTTT--CCCGGGCGCGGCGGCCGCC chr4 - 94230402 38458624 38458623 38458901 55771502 55771501 55771779 278 CCCCGCCGGGTACCGGCCGGCCCCTGGTA-----GAAGGAGCCTGGCCGGGCGGAAGTGGGGCGAGCGCCGAGCGAGCGGGGCTGAGCC-GTCCCGCTCTGCCGGGATACGTGGCAG--CGGCTccc-----cgccgggc-cgggccgcgccgccgcTCCCAGGCCG--------TCACCCACCTTCTTCACTCTGCGGGCCGTGTAGAGCCCCATCCCGTCCTGCACTTTGGACGACTTCAGTGCAAACCTGTCCGGCACGTACATGCCCAGCATTTTGCACCGGGCCGGGCCGCCGCC ........x.:x...--...:...:..:x-----:x:.:x........x...-----:x.......----.:....x.....:x:....-.:.x...:.---....x:x:.:.....--..:....x-----.:.x....-..x.xx.:..x.xx..x.x.......--------...........::x...........................x........x..::x...x........x.x:................................--x......xx...x...... 15M2I12M5D18M5I9M4I19M1D9M3I15M2D8M5D8M1D26M8D104M2I19M 205/262 78.2% 278/94230402 0.0% 38/262 14.5% 82463723 NA +3116 chr4 + 190214555 120929532 120929531 120929565 34 TGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982321 18982320 18982354 75248049 75248048 75248082 34 TGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............................:... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 101947211 88267344 +3185 chr4 + 190214555 120957701 120957700 120957775 75 CTGCAACCTCTGCCTCCCAGATTCAAGGAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCAAACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:..:..:xx:x..:.::.:......x:x...x.xx.x........::..................x.::x... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 102760575 87453980 +3099 chr4 + 190214555 120992790 120992789 120992835 46 GTGTGCTTTTGGGTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTG chr4 - 94230402 62702753 62702752 62702798 31527605 31527604 31527650 46 GTGGGTTGTTGGGTTTTTTGTTTGTTTGTTTGTTTTCTTTTTCTTG ...x.:.x...........................x:...x.:... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 58290037 NA +3428 chr4 + 190214555 121017423 121017422 121017490 68 AAAAAAAAAACAAAAACAAAAAACAAAAGAACAAAAACAAAAACAAAAACAGGAAAACAGGGCTACAT chr4 - 94230402 41560957 41560956 41561024 52669379 52669378 52669446 68 AAAAAAGAAACAAAAACAAAAAACAAAATGCCAACAGCAAAAATAACCACCAAAATCCAGAAGTACAT ......:.....................x:x...x.:......:..xx..x::..xx...::x..... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 79456466 NA +114130 chr4 + 190214555 121035618 121035617 121037660 2043 GGGAAAATGAACAGTATATAATCTAAT---CTCTTTAATTTTATGTACATGAATATAATGT-ATGTCAACTTTGTACATGAGATACATATAGTATTTAAACATTTTACTCAAC-AAACAAGAATTTACAATAGCAATATAACTGACTAGAGGGCTATCAACTTAAT-AATACTTAGATTAGATCTGTACTTTAATAGGAAAAGAATTTAATAGTTTACAATCATAGAAACACTGACATTTAAAACAAGAATTTATAAAATAATTTATATATATCCTAGCATCTACA------GAGAGGAATGATTTGCATTTGT---GGGTGTGTGCAA---------TGAATGGCATATTTTAAATTTTTAGGTAATAAAATAATTTAGAAGCAGTTCATGCAGTGGTCAAAGCAAGGAATGGCAAGTTCCTTCAAGAAGCCCT-CTATCTTTGACACCAACCGG---------------CATCAGACACACACTAGG---------------TACCATGGGGCACGCTAGAACAAGTCTCCTTCAAGAGTTACTTATATAAACATCAATATACACACGTTGATATCCTTCCTTCCATAGTACAAGTACAGGTCACAACTTCTCTCAACTGTGGGAGTAGTCAGTTTATACTT---AAAGTGATTTAATGTCCCTCCTGGAGTTCTACATAATATATCTCTATAAGAAGGTA-ACTAACAGAACTTTCTAGTTTTCACAACCTTACTCTGATACTTTACAGAGTGCCCCCCATGTCCTATGACATAAACATCCAGCAGGTAAGATTTGCCAGGCTGAAGACCTTTAATTGTTTCTGTGGTCACTGCTTTCTGCAGGTTTTGACTGTGGAAATATTTACAGAGGACCTTTTCTGACTTCTTCCTTATATCTGGTCCTAGACATTGGTTTTGCTCTCTTTTCTTCTGGTCTTCATTGTAGTTATCATCCACTTCTTTTTTGTAGATGCAAAACTTGTTCCTTTCCTGAGTGCCTAGCCAAGCCACGGTGGCTGAGGAACAGGTACGGAGCTTGTCAAAGGCTTTGATTCTTGTGTCTTCAGGAAGAGAGGGAAATGACTGCTTAGTAGGCCTTGTGGTAGCTAGAATTTTCAACATAGATGCTCCTTTCTTGTTTCCTTTCAGTCGAACGAGGTATTTAGCTTTAGGTTTTCCTCTAAGCTGAAACTGCTGAATGCCTTCCACATTCTGAGACAGAAGAAGTTTCCCATCTCTTCTCACTTGGATTTGGACAGCATCCAGACAAGAGTGAATAAAGAAGGTGACTTTTTGGTGAGAAGAGACTGGAGCAAACCGTAGAAACTTTGCTCCCTTCCTTTTAACAAATACATCTGTTATCTTCCCATCTTTTAGCTCGACTGTCTTCTGTTTGGCTTCTTCCTTGGTCCTGGCAAAGGTACCTACATAAGCGGTGCTCATGTTGCTGTTGATGTTGACCACAAATACATCAAAGTAGTACTGCGTGTCGGGTTTCAGATCAGAGACGGTGAAGATGTTCTTGTTTCCTATGCAGATTTTCTGAATATCAACCTTGGGCCTGGAGTAGACATGACGCCCCAGTTTTGGAGAAGGCTTTGCCTGGAAACTGCGTTCTTTACCTGAAT---TATCAGAAGGAAATCCAAAGTGGGCAAAGTCAAAGGGGCTGAAGTCCAGACCAGGTTTCGGTGCCATCATAAAAGCATCATCTGCACTCAGTTTTGCTTCCACTGCACAGAGACTTTTGAAATTGTGCTCTTTGTTGATGACCACACAGTACTGAATGGGTTGTTTCAGCAAAGAGGCAGTGGGGCTTGGTTTCCAGGCCAAAGTGACCGTGGTGCGCCCCAGTGAGGTCACATCTACTCTTGGGTCATAGGGTAACTCAGGGTATGGCTGATCAGATTCTGGAGTTGTGGTGGCATATACTTTGAAATGTGTGTCTTTCTCTGTTGAAAGAAGATCCAACTGATATAAACCGGATGGGGAACTAGACGATATAAAATACTCAACATCATTGCCTTTGTAGGAGAATAACTCAGTGCCTTCCTCATTAATGATCTGCTGCTTCTGCTGCTCAAGAGGTTCCAGATCACCTA chr4 - 94230402 38480758 38480757 38482841 55747562 55747561 55749645 2084 GAAAAAAGAAACaatatataatctaatattttttttaattttCTGTACAGGAATATAATGTTATGGCAACTTTGTACATGAAATACATACAGTATTTAAATGTGAAAATCAGCTAGGTAAGAATTTACATTAGCAATGAAACTGATTCATGTGC----AGCTCAGTTAATATTTAGTTTAGATCTGTATTTTAATGGGAAAAGATTTTAATAGTTTACAATCATAGAAACATAAACATTTAAAACAAGACTCTGTAAAATAATTTACAGAAACTCTACCATCTACACTCAGAGAAAGGGTGTATTCCTGTTTGTTCTGTGTGTGAGTAACAAGGTGGATGAATGATTTATCTCAGCCTTTTAAGTA-TAAAATAATTTAGAAGCAGTTCATGCAATGTGGAAGCGAAGGAATGTCA-GTTCCTGCAAGGTTTCCTGCTACCTCAGACATCTACTGAGCATCAAATGTGGGTCACCAGACACATGATAGTACAGCTGTCAGATGCTGCCAGAGAGCAC--CAGCCTCAGTTCCTCCAAACAATCACTTATGTAAACATAAATATACAA--GTTGATATCTTTTCT-ACACAGTACAAATACAGACCACAACTTCTC--AGCTGTGCAAGTAGTCAATCTGTATACTGGGAAGTAGGATAATGTTCAGAGTGGAGTTCCA-----TATATCTCTATTTACAGGTGCACTAACAGAACTTCCTCGTTTTCACCAATTTGCTCTGGTATTTGACAGAGTGCCCCCCATGCCCAATGACATACACGTCCAGCAAGTAGGACTTGCCAGACTGCAGGCCCCGGATTGTCTCTGTGGTAACTGCTTTCTGTATATTCTGGCTGTGAAAGTATTTACAGAGAACCTTTTCCGACTTCTTCCTTGTATCTGGACCCAAGCACTGGTTCTGTTCTCTTTTCTTCTGCTCCTCGTTGTAGTTGTCATCCACCTCCTTTTTGTAGATGCAGAATTTGTTTCTCTCCTGTGTGCCAAGCCATGCCACTGTGACTGAGGAACACGTGCGGAGTTTGTCAAAGGCTTTGATTCTTGTATCTTCAGGAAGAGAAGGAAATAACTGCTTGTTAGGCCTTGTCGTTGCCAGAATCTTCAGCATAGAAGCACCTTTTTTGTTTCCTTTCAGCCTAATTAGATACTTAGCTTTTGCTTTCCCTCTCAGCTGGAACTGCCGTACCCCTTCCACGTTTTGAGACAAGAGTAGTTTGCCATCTCTTCTAACTTGGATCTGAACAGCATCTAGGCATGAATGAACAGAAAAAGTGACCTTCTGGTGAGATGAAACAGGAGCAAACCGCAGAAATTTGGCTCCCTTCCTCTTGATGAACACATCTGTAACTTTGCCATCCTTCAGCTCAACTGTTTTCTGCTTGGCCTCCTCCTTCGTTCTGGCAAAGGTGCCAACATATGCGGTGCTCAGGTTTGTGTTAGTGTTTACTGCAAACATGTCAAAGTAGTACTGTGTGTCGGGCTTCAGATCAGACACCGTGAAGATGTTCTTGTTCCCAATACAAACTTTATGCAGGTCAACTCTTGGCTTTGAGGATGTTTGACGCCCAAATTTTGATGGTGATTTTA---GGAAACCACGTTCTTTGCCAGCATTGCTGTCTGAGGGGAAGCCAAAATGGGCAAAGTCAAATGGACTGAAATCCAGACCTGGTTTTGGAGCCATCATGAAGGCATCATCAGAACTCAGCTTGGCTTCAACAGCACAGAGGCTTTTGAAATTGTGCTCTTTATTGATGACTATGCAATACTGAATTGGCTGTTTCAGCAATGAGGCCGTGGGACTTGGCTTCCATGCCAGCGTTACTGTCGTACGTCCCAGAGAAGTAACATCAATTCTTGGATCATAAGGTAATTCAGGGTAAGGTTGGTCAGATTCTGGAGTAGTAGTTGCATACACTTTAAAATGTGTATCCTTCTCTGTTGACAGCAAATCTAGTTGGTACAAACCAGAAGGGGAACTAGAGGACACAAAATACTCAACGTCGTTGCCTTTGTAAGAGAACAGCTCTGTGCCTTCTTCATTAGTAATCTGCTGTTTCTGTTGCTCAAGAGGTTCTGGTTCTCCTA .::....x:....:.............---:.:.........x......x...........-...x...............:.......:..........::.xxx.x...:.-.:::...........x.......:x......:.x:x.x..----.:..:.:.-....:....x...........:......:........x..........................:x:...............x.:.:............:.x.x.::...x........------..:...:xxx...:x::.....---.x.....x.:..---------......::x...:.:.:x:.....:...-...........................:..xxx..:xx........x..-......x....:xx:...-...:..:x....:.x..:.:---------------..:........::x...x---------------.:...x:.:....--:..xx:x...::.:::x..x.:.:......:.......x........x--.........:..:..-x..:.......:.....::...........--.:.....x:........:.:.:..:x:---:....::xx......:.xxxx........:.-----...........xx:x....:-.............:..x........x.x:..:.....:..:..x.................:..x........x..:.......:...:..:.......:...x..:..::x:.....:........x...........:.x:..:..:.....:..:...........:........:............:.......x..:.::..:.....:..:..............x..:..:........:........:..:..............:..:.....:..:.....x.....x.....x.....x...:..........x..:.....:.......................:..............:......:.......:x..........x..x..:.....:....:......x..x.....:..............:.x..:x..:..:........x.x...:.....x.....:......:.x.:x........:..:.......::..x.....x...........x........:..:........:..:..x..:....:.:.:..:.....:..:........x..:..x...........:.....:..x...........:..:.::..:........x.::..x.....:..:.....:.....:.....:.....:..:.....x..:...........:..x.....x..........x...xx....::....x..::....:.::..............:........:...........x..x.................:..x..:..:.:...x..x.x:.....::.x...:.x...x.x::x........x.:.....:x.:x.::...:---......::........:..x.x..---.:..x..:..:..x.....:..............x..:.....:........x.....:..x........:..:........x.x......:..x.....x..x........:....................:........:.::..:........x..:...........x.....x.....:.....:.....x....:x..x..:..x..:..:.....x..:..x.....x.:......:.....:.....:........x..:..:..............x..:..x.....:.....:........:..:...........x..x.:...:.::..:..:.....:..x...........x..:.:............:..:...........:.....:.:...x........:......:.:........:.....:..............::.x..x.... 27M3I31M1I51M1I40M4D8M1I119M6I22M3I12M9I28M1D49M1D18M1I20M15I18M15I13M2D48M2D15M1D30M2D27M3I31M5D20M1I900M3D24M3I471M 1605/2022 79.4% 2084/94230402 0.0% 83/2022 4.1% 82554860 NA +8598 chr4 + 190214555 121039926 121039925 121040070 145 TTACCTGAGCCTTCCCCGCTCCTGTCCTCTGGCAGCTCCTGGAGGCTCAGCTTCCACTCCAAAGGCGCATCACAGGGCGTCACTGTGACTGATAATGGAGTATTGTCTTCTTCAACCACAAAGAAATACCTGTGGGAAAGTGGAC chr4 - 94230402 38483648 38483647 38483792 55746611 55746610 55746755 145 TTACCTGAACCTTCTCCACTGGCTTCCTCTGGGAGCTCTTGTACACTCAGTTTCCACTCCAGGGGAGCATCACAGGGTGTCACTGTTACTGCTAGGGGTGTGTTGTCCTCTTCCACCACAAAAAAGTACCTAGGGGAAGGTTAAC ........:.....:..:..xx:x........x.....:..x.x:.....:..........::..x...........:........x....x..:x..x..:.....:.....x........:..:.....:x.....:..x:.. 145M 113/145 77.9% 145/94230402 0.0% 0/145 0.0% 82556278 NA +13254 chr4 + 190214555 121045645 121045644 121045847 203 AATACCTCTTAGGTGTATCTCTAAAGAGATAACTGCTAATTTCAGCTCCATCTGGAATTACTGACGAATCATGAAAAAATGCCTTGTCCCGGATCTGCATCTGAAAAAGTTCCTCATCCCGGGTGGGTAACTTCTGGGTCCTTGAGCTGAGTGGAAACAGGAGCCACAGCAGGCACCAGTGGAGCAGCACCATCCTGAGGCAA chr4 - 94230402 38484681 38484680 38484883 55745520 55745519 55745722 203 AATACCTTTTAGGTGTGTCTCGGAAGAGGTAGCTGCTAATTTCGGCTCCATCTGGGATGACTGATGAATCATGAAAAAACGCTTTGTCCCGGATCTGCATCTGGAATAGCTCCTCATCTCTGGTAGGCAGCTTCTGCATCCTGGAGCTGAGCGGCAGCAGCAGCAAGAGCAGCGGGCAGTGGAGCAGGAGCATCCTGCAGCAA .......:........:....x:.....:..:...........:...........:..x.....:..............:..:....................:..x..:........:.x...:..:.:......x:....x........:..x.:...x...x.x.....xx:x...........x.x.......x:.... 203M 166/203 81.8% 203/94230402 0.0% 0/203 0.0% 82560964 NA +10397 chr4 + 190214555 121052321 121052320 121052610 290 ATTTACAATGACAAAAAAGGATGGGCATTCTGA-TTTACTTGAAGCAAATGTATAGAGAATAAATGAAATCTAATGTTTAATTAAAGAGAGTGGAAAGTGCATGATTATAATTTGGCGAGAATAATTTCAAGGAATGGTCTGCCACAG-AGATTTCTGTTAT-TTTCTTTTCCTTTCTAAATGCAAATATTTAGTCTTTTAAATT-----------TCTATTTTCAAACTCAAG----------AGCATTTGTTT----------TTGTTTGAATCATCCATGTCACATTTGATAATAAATCTGAAGC-------ATTTGGTCCAGGTGTA chr4 - 94230402 38488627 38488626 38488952 55741451 55741450 55741776 326 ATTTGCAATAACAAAACAAAACAAGAGATCTGGGTTTATTTGAAGCAAATGCATCTGGAATAAATGAAACCTAATGTTTAATTACAAAGAGTGGAAAATGTACGACTGTAATTTAGTGAGGATCATTTCAAGGCACTGCCTGCCACAGTACCTTTGTGTTGCATTTCTTTTTCTT-----ATATGGTTGGTTAACTTTTTTTTTTCCTGCTTATGCTCTATTTTTAAATTCTAGGTTGTTTTTTAGGGTTTTTTTTTTTTTTCGGTTGTTTGCATTACCCACGCTGCATCTCATAATATGTCTGCAGATTTATTGACTTGATTCAGGTCTA ....:....:......x.::.:::.x:x....:-....:............:..xx:............:..............x.:..........:..:.:..:.:......:.:...:..x.........x.:x.:.........-.xx...x....::-........:...-----..::::x.:x...:::....xxx..-----------........:...:..x..----------..x:...x...----------.......x..:.:...:.:::...:.x......x:....x..x-------.:...:.:.....x.. 33M1I114M1I13M1I12M5D25M11I18M10I11M10I43M7I16M 210/285 73.7% 326/94230402 0.0% 46/285 16.1% 82563694 NA +3411 chr4 + 190214555 121069386 121069385 121069476 91 TAAGAGATAAAAGCTGTATCTGCAAGTGATTAAAAGATGTTTTATATTCATGGTTTCATTTCTGCTGAAATAAATGCGTAATTTAAACCAA chr4 - 94230402 38497099 38497098 38497189 55733214 55733213 55733304 91 TAAAGCATCGAAACGGTATCTGCAAGTGATTAAACGACGCCTTGTAGCCATTGTCTGGGAGCTGCCGAAATAAAAACACAGTCCACGCAAA ...::x..x:..:.x...................x..:.::..:..x:...x..:.x:xxx....:........x:.::.:.::.x:.x.. 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 82572287 NA +3377 chr4 + 190214555 121071727 121071726 121071800 74 AGCTAAATTAAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAA--AAAACGAGGGAAACCTGCTCCT chr4 - 94230402 37057553 37057552 37057628 57172775 57172774 57172850 76 AGTAAAATAAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAAATTAAAACTCTGATAGCTTGTTTCT ..:x....x..............x.xx...............x..x......--.....xxx.:x.:.:..:.:.. 52M2I22M 57/74 77.0% 76/94230402 0.0% 2/74 2.7% 84014174 NA +3079 chr4 + 190214555 121071730 121071729 121071784 55 TAAATTAAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAACG chr4 - 94230402 50998068 50998067 50998122 43232281 43232280 43232335 55 TAATTAAAAAACAAACAAATAAACAAAAAAAAACAACGACCAAAAACAGAAGATG ...x.x.............:.......x..x......:.:x.....x.:..:.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 70073662 NA +3030 chr4 + 190214555 121071732 121071731 121071780 49 AATTAAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAA chr4 - 94230402 28228771 28228770 28228819 66001584 66001583 66001632 49 AGTTAAAAACAAACAAACAAAAACTCAACAACAACAACAACAAACATAA .:...................x.xx............:..x...x.x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 92842961 NA +3075 chr4 + 190214555 121071734 121071733 121071779 46 TTAAAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAA chr4 - 94230402 33205667 33205666 33205712 61024691 61024690 61024736 46 TTAAAAACAAACAAACAAAAAAAAACCAATACCAAAAAAAAAAAAA ...................x...x.x...:.x...x.......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 87866067 NA +3319 chr4 + 190214555 121071737 121071736 121071793 57 AAAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAACGAGGGAAACC chr4 - 94230402 18021890 18021889 18021946 76208457 76208456 76208513 57 AGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATC .:..x..:x.......................:.........x.::x:.:.:...:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 103049847 87164708 +3211 chr4 + 190214555 121071738 121071737 121071783 46 AAACAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAAAC chr4 - 94230402 50307470 50307469 50307515 43922888 43922887 43922933 46 AAGTAGGAAAATAAACAAACAACAACAACAATAAATAAAAAAAAAC ..::.::x...:.......................x.......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 70764268 NA +3018 chr4 + 190214555 121071741 121071740 121071781 41 CAAACAAACAAACAAACAACAACAACAATAAAAAAAAAAAA chr4 - 94230402 31288739 31288738 31288779 62941624 62941623 62941664 41 CAAACAAACAAACAAACAACAACAAAAATACAAAGAAGAGA .........................x....x...:..:.:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 89783002 NA +3063 chr4 + 190214555 121071742 121071741 121071779 38 AAACAAACAAACAAACAACAACAACAATAAAAAAAAAA chr4 - 94230402 79230836 79230835 79230873 14999530 14999529 14999567 38 AAACAAACAAACAAACAATAACAACAACAACAAAAAAA ..................:........:..x....... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 41840906 NA +3143 chr4 + 190214555 121072369 121072368 121072508 140 GACCCGCGGGGCTGGCGCGGGCTTCGCCGGCCGCCGCTAGTCGCACA-GGCGCCTGGCTGGAGC-GCCGCGCGGGGTGCTGGGAGAGCCGGGCGCACGGGGCGGCAGCGGCCGTGGCGGGTGCGCTGCTCAGTTAGCTCCAC chr4 - 94230402 26362996 26362995 26363119 67867284 67867283 67867407 124 GACCCGCGCTGACGGCGCCGG----GCCGG--GCAGTGAGCGGCACCCGGCACC--GCCGATGCCAACGCGC------CTCGGGGAG----GGGCGCGGGGCTGCGGCGGCAGTGCGGGGTGCGCTGCCCGGACAGCTCCGC ........xx.x:.....x..----.....--..x.:x..:x....x-...:..--..:.:x..-:x.....------..x..:...----.x..:......x..:.....x...xx...........:.:.x:......:. 21M4D5M2D15M1I6M2D8M1I7M6D9M4D51M 91/122 74.6% 124/94230402 0.0% 20/122 16.4% 94709373 NA +3098 chr4 + 190214555 121087728 121087727 121087773 46 TATATATATATATATACACACACACATATATGTATATAATGGAATA chr4 - 94230402 21704674 21704673 21704719 72525684 72525683 72525729 46 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .........:..:.:...........:.::......x....x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 99383054 90831501 +3098 chr4 + 190214555 121087728 121087727 121087773 46 TATATATATATATATACACACACACATATATGTATATAATGGAATA chr4 - 94230402 21701101 21701100 21701146 72529257 72529256 72529302 46 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .........:..:.:...........:.::......x....x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 99386627 90827928 +3013 chr4 + 190214555 121106875 121106874 121106917 43 TGCCAGGTATTTTTGGTTTTTTTTTTTTGTTTGTTTGTTTGTT chr4 - 94230402 41883540 41883539 41883582 52346821 52346820 52346863 43 TGCCAGAAGTTTTGGGTTTGTTTTTTTTGTTCGTTTGTTTGTT ......:x:....x.....x...........:........... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 79223335 NA +3005 chr4 + 190214555 121106882 121106881 121106936 55 TATTTTTGGTTTTTTTTTTTTGTTTGTTTGTTTGTTTGGTTTTTGGCATGCATCA chr4 - 94230402 25302470 25302469 25302524 68927879 68927878 68927933 55 TATTTGTGGAATTCTTTTTTTGTTTGTTTGTTTGTTTTAATTTTTACTTGCACTA .....x...xx..:.......................x:x....x:.x....::. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 95804412 NA +3078 chr4 + 190214555 121114272 121114271 121114332 61 TTTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA-CACATCTCTTTTTAAGAACT chr4 - 94230402 51342067 51342066 51342128 42888275 42888274 42888336 62 TCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCACCATATCCTATTTCAAAATCT .:...x.........................xx..x..x..-..:...::x...:..:.x.. 41M1I20M 48/61 78.7% 62/94230402 0.0% 1/61 1.6% 69772205 NA +3029 chr4 + 190214555 121114275 121114274 121114330 56 CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACATCTCTTTTTAAGAA chr4 - 94230402 85043598 85043597 85043653 9186750 9186749 9186805 56 CTCTTTCTCTCTTCCCCTCACACACAGACACACACAGAGCAATGCCTTCTTTAGAA ....:.......::.:..........x.........x.xxx..x:...:..x.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 36070677 NA +3193 chr4 + 190214555 121118009 121118008 121118089 81 TGTGTGCGTGTGTGTGTGTGACAGAGAGAGAGAGAGCATTCACGCATGTTACAAGATTTTGGCAAGTAC-ATTGGTTCACAA chr4 - 94230402 81629064 81629063 81629133 12601270 12601269 12601339 70 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTT--------TTACAGTATTT----AAATATAAATGGCTCACAA ......:...:.......x..x...............:..--------.....:x....----..:..:-.x...:...... 40M8D11M4D6M1I12M 58/69 84.1% 70/94230402 0.0% 13/69 18.8% 39488945 NA +3592 chr4 + 190214555 121124598 121124597 121124753 156 AAAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGGAAGACAGAAAGAGAGAA---AGAAGAAAGAAAGAAAGAAA chr4 - 94230402 29503818 29503817 29503974 64726429 64726428 64726585 157 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAG--AGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGA .......:.:...:..:.:........:x:.::.......:...:.xxxx.x:....:...--.....x::.:x.x:..x..x.:x...x..::...x.xxx.:::xx:x:.....x:..:x.x....xx...:..---...:x....:.x...::.:. 61M2D73M3I20M 94/154 61.0% 157/94230402 0.0% 5/154 3.2% 91620780 NA +3102 chr4 + 190214555 121124599 121124598 121124678 80 AAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 62511306 62511305 62511385 31719018 31719017 31719097 80 AAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGG ......x:..::...:....:....x...::.x..x.:xx.:x:...:.x::.:..:...:x....:......x....:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 58613293 NA +3299 chr4 + 190214555 121124649 121124648 121124735 87 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGGAAGACAGAAAGAGAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGG---GACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x:.x..xx.::.:.:......:.:x...---....::..:...:.... 67M3D17M 58/84 69.0% 84/94230402 0.0% 3/84 3.6% 84266355 NA +4001 chr4 + 190214555 121124716 121124715 121124858 143 GAAGACAGAAAGAGAGAAAGAAGAAAGAAAGAAAGAAACAGAGGGAAGGA-----GAGAGAGAAAGAA-AGAGAAAGGAAGAAAAAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAAGAAGAAAGAAA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .....xx.:.:....:.:.:.....:..:.x..::...::.:.:.:x..:-----:...:........-.x.:...x...x.x...::.x.......:x::x:x::.::x:.:x:..x.:..:......:..:..x.:x:...x..... 50M5I13M1I80M 88/143 61.5% 149/94230402 0.0% 6/143 4.2% 77070728 NA +3884 chr4 + 190214555 121124727 121124726 121124870 144 GAGAGAAAGAAGAAAGAAAGAAAGAAACAGAGGGAAGGAGAGAGAGAAAGAAAGAGAAAGGAAGAAAAAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 72821452 72821451 72821594 21408809 21408808 21408951 143 GGGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGA-AAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAA .:.::..:.x.::......::x...xx::x..x....xx:..:.:..........-....:.....x.:xxx:x::::::.....:....:xx..xxx..:...:.....x..:.x........xx.:x...:.:::...x... 55M1D88M 87/143 60.8% 143/94230402 0.0% 1/143 0.7% 48303275 NA +3314 chr4 + 190214555 121124765 121124764 121124838 74 AGAGAGAGAAAGAAAGAGAAAGGAAGAAAAAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAA chr4 - 94230402 17831020 17831019 17831093 76399310 76399309 76399383 74 AAAGAGTAGAGGCAAAAGAAAAAAAGCAGATGGAATCAATGGGAGGGCAGGAGAAAGAGAGAGAGATGAAGGAA .:....x::.:.x..:.....::...x.:.x:...xx..x.:.....x:.....:...........x:...:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 103293745 86920810 +3406 chr4 + 190214555 121124765 121124764 121124838 74 AGAGAGAGAAAGAAAGAGAAAGGAAGAAAAAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAA chr4 - 94230402 17835840 17835839 17835913 76394490 76394489 76394563 74 AAAGAGCAGAGGCAAAAGAAAAAAAGGAGATGGAATCAATGGGAGGGCAGGAGAAAGAGAGAGAGATGAAGGAA .:....x::.:.x..:.....::...:.:.x:...xx..x.:.....x:.....:...........x:...:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 103288925 86925630 +3830 chr4 + 190214555 121124791 121124790 121124957 167 AAAAAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAGAGAGA chr4 - 94230402 21758891 21758890 21759057 72471346 72471345 72471512 167 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGA---AGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAA ...::..xx......:.......x:..:..---......:.:.xxxx..x:.x:.:x:x:x...x..:x.x.:...x.x:x..x..x...:.:.x:x..xx..::...:......:.:.:....:.:...::x..:x......xxx....::...---.x......:.:. 30M3D122M3I12M 101/164 61.6% 167/94230402 0.0% 6/164 3.7% 99365900 90848655 +3284 chr4 + 190214555 121124857 121124856 121124963 107 AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAA-----GAAAGAAAGAAAGAAAGAAAGAAA--------GAAAGAGAGAGAGAGAAA chr4 - 94230402 44400475 44400474 44400594 49829809 49829808 49829928 120 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA ..:...x....x:x.x:x.x..::..::.:::....:....:...........:...........-----:...:x...xx.x.:.:..x.:..--------::..:.:xx......... 65M5I24M8I18M 72/107 67.3% 120/94230402 0.0% 13/107 12.1% 76724382 NA +11597 chr4 + 190214555 121138502 121138501 121138825 324 TGTAACACAACTTTATAGTAAGTCCTCCCCAAGTACGAATGAATGTATGTTGAGTAAACATCCC-CAAAAGATCCCATTAAGATGTAAACATGAAAGAATGCTCAATACAGCTGTGGTCTCACCATTTGCCTTGTGTTGTACATCTGGCGGAAGCTGGTCAAGAGCATACCACTGATAGTCTGGCTGTGTGGAACAATACAACATTATTATAGCAATATGGACTTCA-----------------AATATAGTGGCATGTCAAAAATACAATTAGGCTATGTGGC-TTTTATTAAGCAGGCAACACAAAAGTAATTTCTATCCAAACCTATTGCCAACCTCACT chr4 - 94230402 38523286 38523285 38523601 55706802 55706801 55707117 316 TGAAGCAAAGCTGTCATGTAAGCACTCAACAGATAAATAGGAAAGT----TTACTATATATCCCTCAAAGGCCCCCATT------------TTAAAGAAT----AGTACAGCTGTTGTCTTACCATTTGCCTTGTGCTGAACATCTGGAGGAAACTGGTCAGGAACATACCACTGACAGTCTGGCTGCACAGAACAATAAAACATTATTACAGCAATATGGACTTCATAGACACTTCAAACAAGAGAATAGCAGCATGTTAAAAACATAATTGTGCTGTGAAGCTTTTTATTA-----GTCATACAGATGCAGTT--TATAAAAACTTATATCTAGCTTGATT ..x.:..x.:..x.xxx.....:x...xx..::..x:x.x...x..----.x.x..x.:.....-....:.x:......------------.x.......----.:.........x....:...............:..x........x....:.......:..:...........:..........::::........x..........:................-----------------.:x....::......:.....:.:....:x...:..x:..-........-----.:x.:...:.x.:.:..--...xx....:...xx.:.:.:.x.:. 46M4D14M1I14M12D9M4D123M17I40M1I8M5D17M2D26M 225/297 75.8% 316/94230402 0.0% 46/297 15.5% 82615216 NA +14922 chr4 + 190214555 121146813 121146812 121147176 364 TTAAAAAAAACTTTGGAATGCAATTTCT----TGGGCAATTCCTTAATATACTTAAGTTAAAAGAAATTTCCAGTCATTT-TCATCTCTTTACAAGATTGTTTAAGAATGACTTCATCCCAGGTGCTGACCTTTAAAAAAAAATTCAATGTCAATTAACAGAAGTCCAAACGTCTTGAATTTTTTT----------AAATGAAAAAAATATACATACATGCTGGCAAAGATTATTTTGTTTTGACTTGTACCTGGGAATTCAGCCTGTTCAACTGGGATTGGGAAGTTTCATTAATTTGCTGTAGCTCCTCTTTCTCTTGATTAAGTCTCTCTCGATCCGATCGTTCCTTTTTGAAGTCTTCTTCGTATATTTGCACCT chr4 - 94230402 38529219 38529218 38529592 55700811 55700810 55701184 374 TTAAAGATATGTTTGA---GGAATTTTTGCAGTAAACACTCCTCTCATCTGCTTAATTTGGAAGTTGTCTCTAATCATTTCTCATCTTCTTAACACATTACTTCAGAATGATTTCATCCCAGGTGGTGACCTC--ACATAAAATTCAACGTCAATTAATAGGAGCCAGAAAGCCTTGGGTTGTGTGGAGAGTGAGAAAATAAAAATAAAATACGCATGTGTTGGCAAGAACATCTTTCTTTTGACTCGTACCTGAGAGTTTAGTTTATTCAGTTGAGTCTGTAATCTCTCATTAGCCTTCTGCAGCGCTTCTTTCTCCTCATTAAGTCTTTCTCTGTCAGACCTCTCCTTTCTGAAGTCTTCTTCATATATTTGTACCT .....:.x.xx....:---.x.....:.----.:::..x.:.::.x..x.:.....x..::...xx:.:..:.:......-......::...xx.x...::..x.......:.............x......:--.x.x.........:.........:..:..:.x:..x.:....::..x.x.x----------....:....x..x....::.::..:......::.:xx:...x........:.......:..:..:..::.:....::..:.x:..x:.xx.:......:::.x...:...x.:........:.x.........:....x:..x..:.x:......:.............:........:.... 16M3D9M4I48M1I52M2D51M10I183M 256/359 71.3% 374/94230402 0.0% 20/359 5.6% 82617594 NA +4204 chr4 + 190214555 121154124 121154123 121154303 180 ATTCTGCATTTAGCATGCTTCCTTAGAGTGTGTTTCACACCCAACTCCATAGTGATCATT-TTAAAGAGCAGTTTGTTTCCTGAGGAAGCTTTTGCGGTTGACCAAGAGATACGTTATTGTTCGCAAACACCCACTTGCTTTATGTGGT-TCTTCAAACTAAGAAATGTTC-TTACTGTCTCT chr4 - 94230402 38535650 38535649 38535825 55694578 55694577 55694753 176 ACCCTGACTTTTGCAGG-TCCTCCAGCTTATGCTGCACTTAAAGACACACAGCAATGGTTATTGCAGAGCA-----TTTCCTCAGGAAGCATTTGTGGTTCACCATGAAATATAGAATTGTTAGGAAACACCCAC-GGCTTCATGTGATCTGATCAAACTACGCTACATTTATTACTTTCCCT .::...xx...x...x.-.:.:::..xx.:..:.x...x:xx.:x:x..:..::..x:..-..:x......-----......x.......x....:....x....x..:...::xx......x.x..........-x....:.....:.-.xx........x.xx.::..:-.....x..:.. 17M1D42M1I10M5D59M1D13M1I21M1I11M 118/173 68.2% 176/94230402 0.0% 10/173 5.8% 82618474 NA +5794 chr4 + 190214555 121154548 121154547 121154774 227 TACCTTATTGAGGCGTTTTATTTCACATTCGTAATGTTCCT-TTTCCTTGTTCGCAAGAGTATTTTTTCCCTTTAAAAGTTTATTCTCTTCTTTCAATTCATGTAATTCTTCATTTAGGCGTTCCTTTTCCTTCTGAAGTTAAGACCAAGAAAAGAAAATAAAAGTCAGTACAAGTCAAATGAGATGATATTGTAGGAA----TTCTGATATATCAGCCATGGCAGGCAGAT chr4 - 94230402 38536425 38536424 38536647 55693756 55693755 55693978 223 TACCTTATTGAGACGACTTATTTCACACTCATAGTGCTCTTGTTTTCTTATCAGCGAT-GCATTCTTCTGCTTCAGGAGCTTGTTTTCTTCCTTCATTTCATGCAGGGCTTCACTGAGCACCTTTGTTTCTTTCTG------GGATGCAAAAACACAGAGAAATGCTGTTAAAATGCAGATGGAACCATTTTTCAAGACTAGTTTTCAGAATATCTGC--TGTCTGGCAGAT ............:..x:..........:..:..:..:..:.-...:...:.:x..:.x-.:...:..::x...:.::..:..:..:.....:....x......:.:xx.....:.x..xxx:.::x....:.....------:..:xx.:...x:x.:.x...x.:::x..x..xx..:...::.:x..x..x:.:..x----..::::x.....x..--..x.x....... 41M1I16M1D77M6D57M4I15M2D12M 141/218 64.7% 223/94230402 0.0% 14/218 6.4% 82618123 NA +4708 chr4 + 190214555 121158683 121158682 121158767 85 TTACCTTTCTTTCATATAACTCTTTCATACTTCTAAATTGCTGATCCCATTGCTGGTTAACTTCCAGGAGCTGAAATCATTAAAA chr4 - 94230402 38540975 38540974 38541059 55689344 55689343 55689428 85 TTACCTGTTTCTCATAAAGCTCTTTCATGGTCCTAAATTGAAGGTCCCATTGCTTGTTCACCTCCAGAAGCTGTAATAATCAGGA ......x.:.:.....x.:.........:x.:........xx.:..........x...x..:.....:.....x...x..:.::. 85M 65/85 76.5% 85/94230402 0.0% 0/85 0.0% 82617708 NA +3067 chr4 + 190214555 121178960 121178959 121179076 117 ATAAAGAAGATAAAGATGTAGGACAAAGCAGGGAGGGGGCTGAGTAACGCCATGTGGGACTAGAGAGGGTGAAAAGGTTTCAAAACCAGAA---AGGTTTGAATTGGGATAAAAAAGGCA chr4 - 94230402 52837432 52837431 52837551 41392852 41392851 41392971 120 ATAGAAAGGACAAAAATTCTATGCAGAAGATGAAGAAGGCTAAATCTGGTCTCGCAGTACAAAAGAGTGTGAAAAGACTTGAAAACCAGAATATTAATTTGAATCTGTCCCAGGAAGACA ...:.:.:..:...:..x:x:x:..:.:x.x.:..::....:.:.xxx.:.x:.::.x..x.:....x........::..x..........---x::.......:x.xx:x.::...:.. 91M3I26M 70/117 59.8% 120/94230402 0.0% 3/117 2.6% 68341528 NA +3067 chr4 + 190214555 121191064 121191063 121191111 48 CTTCCTTGTTTTTGTTGTTTTTGTTTTTGTTGTTGTTGTTGTTATTTT chr4 - 94230402 26758409 26758408 26758456 67471947 67471946 67471994 48 CTTCCTGGCTTTGGTTGTGTTTTCTTTTGTTGTTGTTGCTGTTTTTTT ......x.:...x.....x...x:..............:....x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 94432655 NA +9549 chr4 + 190214555 121212881 121212880 121213103 223 AAAGAGATCATTTTAGTTTTCACTTAGCACATACATAGTACAACTAAAACATCTGCCTGTCACTCCATAAACATTCCTACACTTCTCTTCCTTTTACGAGAAAAAAAAATGGAGC-TTTAAGGGACTTTTAATAGCCAGCAGCTGTTTGGCTGCTCAATGTTGCATCTGGAAGAGAGTATGCTACTCACATGGAGAAAAAAAG-------ACAAAAGTATTGTTTAATTTT chr4 - 94230402 38558294 38558293 38558516 55671887 55671886 55672109 223 AGAGAAACCGCTTAAACTTTCGCT-----CAAATGCGATTCAGCCAAAACATCTGCCTGTCACCCCATAAACGTCCCTACACTTCTGTTCCCTTTAC--GACAAAGGAATGGAGCTTTTAAGGAACATTTAATAGCCAGCAGCTGTTTGGCTGTCAAATGCCACATCTGGAGAAGC-TGTGCCGTAAATGTGAACAGAAACAATTATTCTTTAATAGTTTTGCTTAATTTT .:...:.:.::..x.::....:..-----..x.:::::.x..:.:..................:........:.:...........x....:.....--..x...::........-.......:..x..........................::x....:::........::..x-.:...:::xx.::..:.x.:...x.:-------x:..x...x...:........ 24M5D68M2D16M1I60M1D26M7I21M 160/215 74.4% 223/94230402 0.0% 16/215 7.4% 82654587 NA +5349 chr4 + 190214555 121217216 121217215 121217366 151 CCAATTCCTGCAGGCAATTAACACATTTTAAATGCATCTGGAAACCACCAATTGCTGAGAACCCATC-AGAAAATTTAGGAGTT-AGGCCCATGGGAAACACGAAGCCAGTTTGTCTGAGTTTCAAGCATTTCTGTTTAATTGTAACAACAAC chr4 - 94230402 38562251 38562250 38562403 55668000 55667999 55668152 153 CCCATTCCATCAGGCATTTCACACATTTTAAATACATACTATAATCACTAGTTGCAAGAATCCTATTAAGAAAAAACACCAATTCATTTTCACGTAAAACTTGATTCCAGCTTGTCTGAGTTTTATGAGTGTCTGTTTAATCATAACAAAAAC ..x.....xx......x..x.............:...x:x:x..:...:.:....x:::.x..:..:-......xx:.xx.:..-.xx::..:.x:....x:..xx....:............:.x.x:.x..........::......x... 67M1I16M1I68M 104/151 68.9% 153/94230402 0.0% 2/151 1.3% 82654965 NA +11628 chr4 + 190214555 121227341 121227340 121227917 577 GTAAGCGAAATGAAAGTAAAGGCACAAGACATTAT------GTTACTCA--------------CCATGTTCTATCCTGAAAGTCCTTCTCAGATCTAGGTAAG-----------CGTATTACAAGGTCTAATACGGAGACCTGTCTT---TAAGACTCTTTGAATCAAACAGTAACTAAGTGGTTTAAGTAGAAACATGTATTT---TGAAAGGTTAATCCAC---CCATACACAGGGAAACCCCTTTTTTAAGAAAGTCATTCTGCTGCCAAGAGACTATTAATATTCACCTCTCAGATACAAATACAACCTACAGATAAAAGATTCACAACCTATGTGAAA--------------ATACCACAGAGGATTCCCTCTTAGTCTCTATGTTGTAATGGAAACACAAGAAAACAGTATACCTCTTCA--GGCAATCAGGAGTACTACAGGAAATCTACCTGCCCA-CTTAATGGAAAAGTTAGATCAGCTTAATAGGGCCACAACACATAAACATAAATTTAGAATTAGTATAACTTACTGTAAGGACCACATAGGTCACACACTCATTTCTAGGAATGTTCCTGTGTTTCA--TCTTCCTATTTCTTTCCCTGAGAGAGCTAGCACCCAGGTTAAC chr4 - 94230402 38569362 38569361 38569969 55660434 55660433 55661041 608 GCAAATGAAAAGGGCAAAGAGGCACAAGACATCACCCTGAGGCTAGGCAGAGACCTAGCGATGCCAGCTTCAAATGCAGCAGTTACTCACCATTTTAGGTAAGGTGTTCATCTCCGTGCTGCTGGG-CTGGTATGTG--CTTGTCTTAATCAAGGCTCTCTGAATCAAATAACAACTAAGTGGCTTGGAGGCAAATATATACCTATCTCAAGGTTTAACCTACACACCAGGCTTAGGGAAACCCCTTTCTTAA---AGTCATTCTAACGTTGAG-GAC-----ACACTCATCTCTCTCAAATAAACACAGCCCACACA------------GATCTACTTGAAAGCTCTGCTTATCAGAGACCACAGAGGATTCCCTCTCACTCTTCTGATGACCATGGAACAGTGACACAATGGCACGCCCACTCACCAGCAAG-AGGCGCGTGGTGGGAAAAGTGGTGGTCGAGCATGGTGGAAAAGTTGTATCAACTCAAAGGG--TACAAAACACAAGTTTTAATCTAGAAGTAGAATAATTTACTGTAAGGAGTAGATAGGTCAGGGAACCATTTCTAGGAATGCTTTTTAATTAGAATTTATTCTAAAGGTTTCCCT-ACAGAAATAGCACTCAGCCCAAC .:..::....x.::x:x.:.............:.:------.:..xx..--------------...xx...x.x:x:::x...:x:..x.x:x.:........-----------...::.:.x:..-..::..:.x:--.:......---:...:....:.........:.::..........:..:::x:x...:..:..::.---.x..:.x....:.:..---...x:.x:..............:....---.........:x:.:::..-...-----.:.:...:.....xx.x.:...:...:..:...x.------------:.:...:x.....--------------.x...................:.x...::xx:.x::x......xx:::.x.x..::.:.::..:x:...--:....x-...x.:::x:::.....xx.:x:x.:.x.-.x.::..........:x....:..:..x:..--:....x...:..::x.x...:.....x...x....:............x:.x........x:x.x:..............:.::.xx:..xx.--.:x.:...xxxx.......-.x...:x......:...x::... 35M6I8M14I40M11I12M1D10M2D8M3I54M3I16M3I27M3D18M1D3M5D35M12D13M14I69M2I6M1D29M1I31M2D93M2I19M1D23M 362/549 65.9% 608/94230402 0.0% 87/549 15.8% 82657979 NA +6291 chr4 + 190214555 121230042 121230041 121230417 376 CTTCTCACCGTTCTAACTGTAGAGGGGAAACTGGACTCTGTTGAATGCCACCATGAAATAAATGCATTATTTGCACATAAAATGCTGTATTGCTTCTTGTATACATCTAAGCCACCTGACATCAACTGTGAGCAGAAACTGGCAATGTGCCAACTAAATGATTTTTACTGTTCACAATAGAGTATTTTGTTTAGTGATTTACCTTCAGGGAAAAATGAGGAAATGAGTTAGGAAAAAAATTAATAAAACTTGAAGACCAGTGTCGAAAGTGATCGATCCAAAATTAATTTCACATGTCTGAGGGTACAAGT--GTCTGAAGGAAATGGGGGAGGA-------AAGGAGAAAATGAGACTGGCGAAGTAAGACAAGGCCATTTAGA chr4 - 94230402 38572171 38572170 38572532 55657871 55657870 55658232 362 CTCCCCACTCCCCCTATTCAGAAGAGGAAA----ACCCCTTTGGCTAC-ACCATAACATGTCTGAATAAT---------AAAAATTTCATTGCTTCTCATGCATATCCAAGGCACTT---ATCAATAGAAAGACCAGATTGGATGACTGCCATTCAAATCGTTTT-ATTGCTCACTGAAGAATTGTTTGTATAGGGTTTTTCCATAAGGGAAAAATAAGGAAATGAGTTA-GAGAAAAATTAATATAATGTAAAGACAGCAGCTTGAAGTACCGGATCCTTGGTGACTTGTGAAGGGCTTAATTGCCATGTAAGTATTATTGAGGAGAGAAAAGACCACTACAAGGAAGAAAGGAAACAGG-GAAATAA---AAGGCAATTTTGA ..:.:...:x::.:x.:.xx::..:.....----..:.:x...:x.:.-.....:.x..:xx..x..x..---------...x::.x:.........::.::.:...:...x...:.---.....:x.x:..xxx.:.:...xx:xx.....x::....x:....-.:..:....x:x...:.xx.....x...x.x...x..x.x..........:.............-..:...........x..:x.:.....x:xx.::x:....:x:x.....xx::.x.x..x::x.x.x..x.:xxxx..x..--..x.x.xx..::x.:.::.:..-------.....::...x..:..x..-...:...---.....x....x.. 30M4D14M1D21M9D38M3D45M1D64M1D80M2I22M7I19M1D7M3D13M 224/353 63.5% 362/94230402 0.0% 32/353 9.1% 82657871 NA +3101 chr4 + 190214555 121241237 121241236 121241282 46 AGTATTGAGATATATATATATATATATATATATATATATATATATA chr4 - 94230402 69393520 69393519 69393565 24836838 24836837 24836883 46 AGTATTGAGATAGGTATATATATATATATAAATGCATCTATACATA ............x:................x..::..x....:... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 51847717 NA +3359 chr4 + 190214555 121242850 121242849 121242956 107 TTTTATTTTTTTCATTTCATTTACTTTTCTATATACGAGTGTGTGTGTTTGTGCACACACACAGAGTATATATA---AGACATAGATACTTATAGTACATAGAAATGTAT chr4 - 94230402 88147165 88147164 88147274 6083129 6083128 6083238 110 TTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTACATCAGAAAGAAT ....x.......:x..x...x..xxxx.x......::x:...x.....x..:...........x.x:.......---...x::.x...::x.:.x.....x::..x.x.. 74M3I33M 73/107 68.2% 110/94230402 0.0% 3/107 2.8% 33095685 NA +3114 chr4 + 190214555 121254781 121254780 121254845 65 TGTTGGTCACCTTTTTTTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGC chr4 - 94230402 43986077 43986076 43986141 50244262 50244261 50244326 65 TGGTGGTTGCTTTTATTTTTTTTTTTCCTTTTCTTTTTCATACTCTCTCTTCTTCTGGAACTGAC ..x....::.:...x......:....:...........:x.x:.:.:.:..:..:..::..x.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 77268704 NA +3032 chr4 + 190214555 121254783 121254782 121254846 64 TTGGTCACCTTTTTTTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGCT chr4 - 94230402 60688293 60688292 60688356 33542047 33542046 33542110 64 TTAGGAATCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCCTTTGTGAAAGACT ..:.xx.:...........:......:.:....:.:...::::x..:..::....x..x..:.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 60566490 NA +3005 chr4 + 190214555 121270854 121270853 121270908 55 TTTTTTGTTTTTTTTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTGGA chr4 - 94230402 88288845 88288844 88288899 5941504 5941503 5941558 55 TTTTTTTTTTTTTTTTTGTTGCTGTTGTTGTATTCTGTGTTGTTTTAACTTGGGA ......x.............x:.x.....x.:..:...x.......x::..x... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 32982009 NA +17009 chr4 + 190214555 121329335 121329334 121329724 390 AGAATTCTCAGCCAGTTCAGACCTAAAGAGAGCAAGATGTCGTTTGAGCTTTTTCTTCTCCTCTGTCTGTTCACACAATTTGACTTCAATGTTGCCATCACTGAATGCTTCTCCTTTGGTTTCCTCC-----ACTGGATTCTCTCTGAGGGAAAACTTTGCTTTCTTCCGCATCATTGTAATTCCTGAATTTCCATGCCTTTGTGCTGGAGAGAAGGTTTTATTTACTATGCAATAACAAACTGCAGACAAAACATTTTTTTTGAAGTTTTCATTCATAAATGCATAGACAATGGGATTACAGATGGAGTTGGAAAATCCAATAATTTGCACGATAGCAAAAATCATCTTGATTGTGACATCATCATATTCCTTTTCAAAATTACCTGAAATAAA chr4 - 94230402 38598482 38598481 38598874 55631529 55631528 55631921 393 AGAATGCGCAGGAAGCTCAGAGCTGAATAAAGTGAGGTGCCTTTTCAAATTCCTTTTTGAAGACGGTTGGTCACAGAACTTCACTTCAATGTTGCCATCACTGAACGCCTCTCTCCTGGCCTCATCCGAGTCAGTGGGAGCCCTCTGAGAATCACCT--GCCTTTTGCCGCCTCATAGTAATCCCCGAGTTCCCAAGTTGCCTGGTTGGTGATGCATTTTCTTTGACAACGCAGAAGCAGATGGCAGACAGAAAATTTTTCTTGAAGTTCTCATTCATGAAAGCATAAACAATAGGGTTGCAAATAGAATTGAAGAATCCTATGATTTGAACAATTGCAAAGATCATTTTGATTGTCACATCATCATACTGCTTTTCAAAGTTACCTGAAAGGAA .....x.x...xx..:.....x..:..x.:..::..:..:.x...x.:x..::.:..:xxxxx:.x:..x.....x..:..x.......................:..:....:::...::..x...-----.x...:xx.:.......::xx.x..--..:..:.x....x....x.....:..:..:..:...x.::x::xx.:...x..x:x:x...:x..x..x.:...:x.:..:.:x.......:..x......:........:........:..x.....:.....:..:..:..:..:..:...:.:.....x..:.....x..:..x.....:.....:........x...........:.x.........:..........x:.. 127M5I25M2D236M 274/388 70.6% 393/94230402 0.0% 7/388 1.8% 82730853 NA +7856 chr4 + 190214555 121330411 121330410 121330548 138 ATGACAAGCACTCACTGTATTCAATCATCATATGGACAACATGGAATGGTGCCCAGCACACAGCAAAGAGAGCCACCACTGTCACCATCATAATGACAGCTCGTTTCTTCTTCCTAAACCCACAAGGAAACATTGTAT chr4 - 94230402 38600676 38600675 38600813 55629590 55629589 55629727 138 ATTGCAAATACTCACTGTATTCCATCATCATGTGAATAATGTGGAAAGGGGCCCAACAGACTGCAAAGAGAAACACCACTGTCACCATCATAACAATTGCTCGCTTCTTCTTCCTGAAATTGCATCAAGACATTTCAT ..x:...::.............x........:..:.:..::.....x..x.....:..x..x.........:x....................::.:x.....:...........:..x:::..xx:.:.....x:.. 138M 105/138 76.1% 138/94230402 0.0% 0/138 0.0% 82729735 NA +15824 chr4 + 190214555 121332801 121332800 121333126 326 GAATATTTCATTAAACAGACCTGGCTATTTTGGACATTTCTTTTCCATGAATAGTTCGAAGCACTGAACCATCCCCAACTCTTTTCTTTATCCAAAGTTCATAACCAATTTTACTGTACAGAATAAGCATCACCATAAGAGGCAGGAGGAAGAGGATGACAAGGATGAAGGTGGTGTAGATCTTCTGGTGCACAGGGCTGGTCCACTCTTCTAAGCAGCAGATGTGTTCCTTTTCATATAGGAAGTCATATTTGATCT-------TCATAATAAGAATAATTCATTAAAAGAACCAGTAGTCAGCATCAAAAAACAGAAATCAGCCAAGTATT chr4 - 94230402 38602124 38602123 38602453 55627950 55627949 55628279 330 GAACATTTCATTTTACAAACCTTGATATTTTAGACATTTCACTCCCATGAATGGTTTGAAGAACTGAAGCATCTCCCACTCGTTTCTTAATCCAGAGTTCATAACCAATTTTAGTGTATAAGAAAAGCATCAATATCAGTGGAAAAAGAAAGAGTATAACAAGTATAAAAGTGGTATATATCTTCTGATAAGTTGGACTGGCCCATTCTTCCAAGCAACAGATGTGCACTTTTTCATACAGGAAGTCATATTTAACCTGTAACAAGCATAAAGAAGATGAGTCACTACAGTAA-TAATACCAAACAT--AAAAACAAAGCACATTCAAATTTT ...:........xx...:....x.x......:........x:.:........:...:....x......x....:..x....x......x.....:..................x....:.::.x........x:..x..x..x.::..:.....x..:.....x..:..:.....:..x........:.:x::x..:....:...:.....:.....:........:x.:........:..............:.:..-------x.....x:.::..:.x...:..x.:x..-:.:..x:x.:...--.......:.:xx..x:...:.x.. 258M7I28M1D13M2D24M 242/323 74.9% 330/94230402 0.0% 10/323 3.1% 82730677 NA +3359 chr4 + 190214555 121335929 121335928 121336054 126 ATAAAATTACTTTCTGCT--CTCACCTATGGAGTCCAGCTCATTCAACAAATTAGTTACATGAAAAAAATCAGGTTACTTTTTTAATGTTCTCTTATCTTAGGCTCATTTGTTATCCTTGAGGATGAC chr4 - 94230402 38373876 38373875 38374000 55856403 55856402 55856527 125 ataaatttatttttatGTGACTAAATTTTGGATTTCATTTTTGTCAAAAAGGCA---AAACAAAAAAAGAGAAGTCACTTTTGTGATGTCCTCCTATCCTAGCCACATTAATTATCTTTGCAGATTAC .....x...:...:xxx.--..x.x:.x....x.:..x:.:xx....x..:x:.---.x.::......:xx.:..:......x.:....:...:....:...x.x....x:.....:...x:...x.. 18M2I34M3D71M 81/123 65.9% 125/94230402 0.0% 5/123 4.1% 82962053 NA +4804 chr4 + 190214555 121336771 121336770 121336875 105 TCAACAATATGATTATACATCTCAACTGGAGTCTACCTCAAGTTGTTGCACGTGCCACATGGGTGATCCTACGATGACTGCCACCAGCCAGACCACACCTGTAAA chr4 - 94230402 38603148 38603147 38603250 55627153 55627152 55627255 103 TTGAAAACATGAACTGCCATTTCACCT--AACATACCTCAAGCCGTTGCACATGCCACATAGGTGACCCAACAATAATGGCCAGCAACCAGACTATGCCTGTAAA .::.x..:....x:xxx...:...x..--.::x.........::.......:........:.....:..x..:..:.:x....x..:......:.::........ 27M2D76M 74/103 71.8% 103/94230402 0.0% 2/103 1.9% 82733623 NA +11949 chr4 + 190214555 121340417 121340416 121340631 215 ATTCACACTGCCATTGGCACATCCAGTGGCCTCACCTAGCATTGTGAAAGCCCTTCGGTTGGTGTATTGCCACTTCATTTTAAAAGGATGCACAAGTCCCTGGTGCCTTTCCACAGCAATGCAGGTCATAGTGAGGATTTCTGTCACAACAGCGGTAGACTGGACAAATGGCACCATCTTGCAAATGAAAGCACCTGCAGTA---AGGAAATAGGACA chr4 - 94230402 38603775 38603774 38603992 55626411 55626410 55626628 218 ATGTACACAGTTACTGGAGACACCTAAGATCTTACCAAGCATCGTGAAAGCCCTTTTATTGGTGTACTGCCACTTCATTTTTAGTGGATGCACAATTCCCTGGTGTCTTTCCACAGCGATGCAGGTCATTGTAAGAATCTCAGTTACAATGGCAGTGGATTGAACAAATGGTACCATCTTGCAAGCGAAGGCACCTATAATAGTCAGAAGGTAAAACA ..x:....x.::.:...x:xxx..x:x.::..:...x.....:............:x:........:..............x.:x..........x.........:...........:...........x..:..:..:..x..:....::..:..:..:..:........:............::...:......::.:..---..:.::..::... 202M3I13M 162/215 75.3% 218/94230402 0.0% 3/215 1.4% 82736642 NA +3057 chr4 + 190214555 121359607 121359606 121359654 48 TTAATACTTAGTAAACTCATATATATATGTGTGTGTGTGTATATATAT chr4 - 94230402 26564524 26564523 26564571 67665832 67665831 67665879 48 TTGAAACTAAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ..:.x...x...x..:.:........:...........:.:....... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 94795083 NA +3234 chr4 + 190214555 121359656 121359655 121359740 85 TGTATATATATATATGTGTGTGTATATATGTGTGTATATATGTGTGTATGTGTGTGTGTGTATATATGTGTGTGTATATATATAT chr4 - 94230402 39267121 39267120 39267205 54963198 54963197 54963282 85 TGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAAT .....:..x.x.x.x:xx.x:.....x..........:x::.:::..:xx................x.....::.x.:...:x.. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 82092535 NA +3077 chr4 + 190214555 121359779 121359778 121359828 50 GTGTGTGTGTGTATATGTGTGTGTGTATGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089498 48089497 48089547 46140856 46140855 46140905 50 GTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ..:x..x...:....:::.............x.x......:......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 73270281 NA +3226 chr4 + 190214555 121364643 121364642 121364715 73 AAAAAAAAGAAAAGAAAAAAGAAAAAGAAAACTTTTTGAAA---------TATGTAATTAAAGATT----AAAATTATTTTACGTT chr4 - 94230402 35419738 35419737 35419823 58810580 58810579 58810665 86 AGAAAAGAAAAAAGAAACAGGAAAAAAAAAACTTTTTGAAAAATGTGCTGTATGTGAATATAAATTGAAGAAAACTTTTCAATGTT .:....:.:........x.:......:..............---------.....:.x..x.:...----....:.x..:x.:... 41M9I16M4I16M 58/73 79.5% 86/94230402 0.0% 13/73 17.8% 85944905 NA +3613 chr4 + 190214555 121365444 121365443 121365633 190 ACTCCATCTCAAAAATAATAATAAATAAATTAATTAATTAATTAAATTATATATATAATATATATAATATATATTATATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAA-TATATATTATATATATTATATATATATAATATATATATTATATATATTATATATTATAT chr4 - 94230402 67910055 67910054 67910220 26320183 26320182 26320348 166 ACTCTATTACATATACAATACTAAAAATAT----------ACTA--TTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATAT----------ACATGTGAGATAAATTTAAGCTGATTAAATATCA-ACAT-TTGAATACATATAAGA-AAATATTTTATTAATGACACACTACAT ....:..:x..x.x.:....x....x.x..----------.:..--...x...:......x.....x.:.....x:.......x....:..:.....----------.:..:.:.x...x...xx.xx.:.-..x....:.-.:..-..:x...:......x.-.x.....x...xx..x.:.:.:..:.. 30M10D4M2D51M10D24M1I9M1D4M1D16M1D27M 119/165 72.1% 166/94230402 0.0% 26/165 15.8% 53455389 NA +3501 chr4 + 190214555 121365489 121365488 121365557 69 ATTATATATATAATAT-----ATATA-------ATATATATTATATATATTATATATAATATATATTATATATAATATATA chr4 - 94230402 67910060 67910059 67910140 26320263 26320262 26320343 81 ATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATA ....:.....:....:-----.....-------...:...x..x.......:......:.......x....:..:...... 16M5I5M7I48M 58/69 84.1% 81/94230402 0.0% 12/69 17.4% 53455429 NA +4495 chr4 + 190214555 121365515 121365514 121365660 146 TATTATATATATTATATATAATATATATTATATATAATATATAATATATATTATATATAATATATATTATATATATTATATATATATAATATATAT--------ATTATATAT---------ATTATATATTATATATATATTTTATATATTATATATTATAT chr4 - 94230402 67910059 67910058 67910220 26320183 26320182 26320344 162 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA-AAATATTTTATTAATGACACACTACAT .....:.....:x...:xx..x.....:...xx:xx.:...xx.x.......:......:.......x....:..x......:..:.:.x...x..--------....x....---------.x..:....x.x.-.x.........xx..x.:.:.:..:.. 96M8I9M9I13M1D27M 105/145 72.4% 162/94230402 0.0% 18/145 12.4% 53455456 NA +3268 chr4 + 190214555 121365524 121365523 121365679 156 TATTATATATAATATATATTATATATAATATATAATATATATTATATATAATATATATTATATATATTATATATATATAATATATATATTATATATATTATA---TATTATATAT--ATATTT---TATATATTATATATTATATATATTTTATATATTATATA chr4 - 94230402 67910059 67910058 67910214 26320189 26320188 26320344 156 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATAT--AATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA------AAATATTTTATTAATGACACA .....:.....xx...:xxx.x.....x...xx:...:...x..x.....x.:.....x:.......--x....:..xx.....:..:.x.x...x...xx.---x....x....--.:....---..:....x.x.------.x.........xx..x.:.:. 67M2D33M3I10M2I6M3I11M6D21M 106/148 71.6% 156/94230402 0.0% 16/148 10.8% 53455465 NA +23706 chr4 + 190214555 121380295 121380294 121380660 366 GCGCGACTCTTACCCCCCAGCCAGTTGTCGGAAATGTTCTGGAGCATGGTGACGGGAATGCAGAAGAAGGTGATGAGCAGGTCACTGAGCGCCAAGGAGCAGATAAAGATGTTGGTGACGGTGCGCATGGCCTTGCTGCGGGTCACCACGTAGAACACCAGAGCATTGCCAAAGAGCGCCAGGGCGAAGATGAGCACGCCGGTGAGCACGAGGGCCAGCTTGGCGCGTCCCGGCAGCTCTGGGGTGTAGACGAGCGGTCGCAGCCGGTACAGAGCGATGAACTGCTCCCGCGTCAGGTTGTGGTCCCGCAGCAGCCGAGAGAACTGCTCCGGGGTAATGTTAAGCGCCTGCATTGCTGTGCGCTCC chr4 - 94230402 38617583 38617582 38617945 55612458 55612457 55612820 363 GCCCGGCACGCACCGCCCAGCCACTCGGAGGAGATGTTCTGCAGCATGGTGAAGGGGACGCAGAAGAAGGCGATGAGGAGGTCGCTGAGCGCCAGGGAGCAGATGAAGATGTTGGTGACGGTCCTCATGGCCCTGCTGCGGGTCACCACGTAGAGCACCAGGCAGTTGCCGAAAAGCGTCAGGGCGAAGATGAGCACGCAGATGAGGACGAAGGCCACCTTGGTACGGCCCGGCAGCTCCGGGACGTACACCAGCGGCTGCAGCCCGTACAGGGCGATGAACTGCTCTCGCGTCACGTTGTTGTCCCGCAGGAGCTGCGCGAACTGCTCCGGGGTGATGTTCAGGGAGCGCAT---GGTGCCCTCC ..x..:.x.x:...x........x.:.xx...:........x..........x...:.:...........:......x.....:..........:.........:.................x.x.......:.....................:......:xx:.....:..:....:....................x.:....x....:.....x.....::..x...........:...::...x..x.....::......x......:..............:.......x.....x.........x...:.x.x...............:.....x..x.xx:....---x....x.... 353M3D10M 300/363 82.6% 363/94230402 0.0% 3/363 0.8% 82762712 NA +4011 chr4 + 190214555 121380321 121380320 121380469 149 GTCGGAAATGTTCTGGAGCATGGTGACGGGAATGCAGAAGAAGGTGATGAGCAGGTCACTGAGCGCCAAGGAGCAGATAAAGATGTTGGTGACGGTGCGCATGGCCTTGCTGCGGGTCACCACGTAGAACACCAGAGCATTGCCAAAGA chr4 - 94230402 18599121 18599120 18599260 75631143 75631142 75631282 140 GTTGGGAATG---------AGGGTGAATGGCATGCAGAAGAGGCAGAGCATTAAGTCACTGACTGCCAGGGACAGCAGAAATGTGTTGGTGACCGTTCTCATCTGTTTGTTTCTTATCAGCACAGTGATGACCAGAACGTTCCCCAAAA ..:..:....---------.x.....xx..x..........:.xx..xx.x:.:........x:....:...xx:x.x...x:..........x..x.x...xxx:...:.x.xx:...x...:xx..xx......:.:..x..x..:. 10M9D130M 93/140 66.4% 140/94230402 0.0% 9/140 6.4% 102781200 87433355 +3216 chr4 + 190214555 121380343 121380342 121380466 124 GTGACGGGAATGCAGAAGAAGGTGATGAGCAGGTCACTGAGCGCCAAGGAGCAGATAAAGATGTTGGTGACGGTGCGCATGGCCTTGCTGCGGGTCACCACGTAGAACACCAGAGCATTGCCAA chr4 - 94230402 72603867 72603866 72603990 21626413 21626412 21626536 124 GTGAAAGGCAAGCACAATGTATTCACCAGCAGATCAGCCACAGCCAGGTTGGCGATGAAGAAGTTGGTCACTGTACGCATGCTTTTGAACTTGATGATCACGTGGATCACAAGAGAGTTCCCGA ....x:..x.x...x..x:x:x.x.:x.....:...x:x.xx....:.xx.xx...:....x......x..x..:......x::...xxx:x.:.x.:.....:..x...x....x:..x..:. 124M 77/124 62.1% 124/94230402 0.0% 0/124 0.0% 48776476 NA +3151 chr4 + 190214555 121403437 121403436 121403488 52 AAATTATATATATATACAT----TTTTTTGTGTGTATACACACACACACACACACA chr4 - 94230402 59708336 59708335 59708391 34522012 34522011 34522067 56 AAAACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ...x:.:..x.........----....:.....:....:.....:........... 19M4I33M 44/52 84.6% 56/94230402 0.0% 4/52 7.7% 61695101 NA +3002 chr4 + 190214555 121405670 121405669 121405728 59 TGTGTGTGTGTATATATATATATATTATATATATATATATATTATATATATATATATAT chr4 - 94230402 20373298 20373297 20373356 73857047 73857046 73857105 59 TATGTGTGTGTACGTGTGTATATAATGCATCTATATATATTACACATATATTCACATAT .:..........::.:.:......x.::..x.........xx:.:......x:.:.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 101032372 89182183 +3399 chr4 + 190214555 121405671 121405670 121405730 60 GTGTGTGTGTATATATATATATATTATATATATATATATATTATATATATATATATATAT chr4 - 94230402 20373297 20373296 20373356 73857047 73857046 73857106 60 GTATGTGTGTGTACGTGTGTATATAATGCATCTATATATATTACACATATATTCACATAT ..:.......:..::.:.:.....x..::..x...........:.:......x:.:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 101032374 89182181 +3260 chr4 + 190214555 121437693 121437692 121437764 72 CTGCAACCTCTACCTCCTGGGTTCAAATGATTATCCTGCCTCAGCCTCTCTAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:..........:..x..xx.xx.x........:..x.........:.:....x.::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 103240567 86973988 +3019 chr4 + 190214555 121471953 121471952 121472036 84 ATTTTGTGTGTATGTATACACATACACATATACATGTATATTGATACATAGGTGCAAAAGAATAAAGTTATTTGTTAAGAATAA chr4 - 94230402 10898951 10898950 10899028 83331375 83331374 83331452 78 ATTTTATGTGTGTATATATATATACACATATACACACATAATGATTAAAGAGTGC------TTCTGGTTGTCTTTTAGGCATAA .....:.....:.:....:.:.............:::...x....xx.x::....------x.xx:...:.:.x...:.x.... 55M6D23M 55/78 70.5% 78/94230402 0.0% 6/78 7.7% 110573002 79641553 +3138 chr4 + 190214555 121583182 121583181 121583284 103 AAAAAAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 1169702 1169701 1169804 93060599 93060598 93060701 103 AGAAAAAAAGGCAGAAAAGGAAGAAAAAGGGGACTCAGATCCATGAGGAAGGAAGGGGTAAAACAAGAAAAGGTAGCCAGAGGGAAGCAATAGAAAAGAGAAG .:.......:.x....:.:......::...:.:xxx..:xxx.x.....:.:....::x:..:x...:..:.:x:.xx:..:.....x..x::.::.::.... 103M 61/103 59.2% 103/94230402 0.0% 0/103 0.0% 120413480 69801075 +3195 chr4 + 190214555 121656386 121656385 121656544 159 AAATAGACTGCCCAGACTTGGGATGTACACACACATACACACACACACACACACACACATGCACGCACACACGCACACACACACACACACACACACACACACACACGAAAGGAAAAACATATCCACAGAAGTTTTTGATAACTAAAATTAGGTGTAAGT chr4 - 94230402 8395770 8395769 8395912 85834491 85834490 85834633 143 AAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATA------TGTATGCCTACATTAATACACACACACACACACAGACAC---------AAATGAATAAAAAACCCAAACTACATTCTGGCAAATAAGG-TAGGTATTAAT ..:x.:.:.x.....:.:xx.x:....::::::....x...:::.:x:...:.------..:.:..x:...:xx.:.................x....---------...x...x..x.x.:...x.xx.xx..:..::..x...::-.....:.x.:. 53M6D39M9D40M1D11M 90/143 62.9% 143/94230402 0.0% 16/143 11.2% 113260616 76953939 +4501 chr4 + 190214555 121668326 121668325 121668688 363 TGACGTGTATGTGTTGGTCATGAGCATGCTA---GTATGAATAAGGCAATGTGTTAAGCACTGGCATACAAATGC--AGCTAAAGGTGCTGAAGGAAGGCAGTGGGGTGGTGCAGGCACACAGCAGGGAGCTCTTC---CCCGTGACAC----GTTAGTCATCTTCTCCACAGAGCAGCAGAAGAGCTTTCTTATAGTCCCCAGATGTATCTCCCTGAAACCAAATGTATTCCATTAACCTCCATGACTCACAGAAGCCATAGAAAATTTTAAAACTAAATAACTGGCAACAAATTTTATTCATAAGACTCTTCTCCCA--AGTGGGTAATC-------TCTGTGACTTTCACATCAGGAATGTTATGCAGGGAGTTTCCTACC chr4 - 94230402 38695770 38695769 38696132 55534271 55534270 55534633 363 TAACATGTTTGTTTT--TAATAAGTGTGATATGAATATAAATTCGAACAGCCATAAAGCATTAAGATGCAAAATCTTAGCTAGGCATGCTAACTGAAGG-------GCTGCAAAGCTGGATTACAAGAAATCCTTCACGTCGCTGCCACCATTACTCATCATCTCCACCACAGAGGAGCAGGAGTGCCTTCCTGTAGTCCCCAGATGTATCTTTCTG----TTAATACAACAAACCAGTCACCATGAGTCAT---GGCCGCAGAAA--TGCAAGGAAAAGCAGCTGCCA--AGACTAAACAGATTACACACTTGTCCCATCCACAGGAAATCCAATCAGTAGATGACTCTTCACTCGGGAATGGCA-GAAGGAAATTCTCTGCC .:..:...x...x..--.x..:..::..x..---:...:...xx.:xx.xx::.x.....:.::x..:....xx.--.....::x:....:.xx.....-------.:x.::x..x::x.:x:..:.:.:::....---:.xx..x...----::.x:......:.x........x.....:..x..:...:.:..................::...----:x...::.x:xx.::.::.x......x...:---:...::.....--.x:..::xx..::.:...x..--.:.:.xx.:xx..x.x..x...x.....--x:::..x....-------.xx:.....:.:xxx..:......x:.-.x...:.:..::..:.. 15M2D14M3I41M2I22M7D30M3I10M4I64M4D31M3D11M2D21M2D28M2I11M7I27M1D17M 211/342 61.7% 363/94230402 0.0% 42/342 12.3% 82972556 NA +7037 chr4 + 190214555 121669586 121669585 121669726 141 AGAAAGGTTCTACTACCTTAATCATGGAATAAAGAGAGGTGGCAAAATTCTTCCTAAACTCCTTCCTGATGTTAAACAGATCAATCTCACTCCTGGAAACCATGACTCTGATGAGGGTATGATCATCTGTCCCAGCTCCCT chr4 - 94230402 38696932 38696931 38697072 55533331 55533330 55533471 141 AGAACAGTGGTTTTACCTGAATCATCTGATACAACGATTTCGCAAAATTCTTTCTGAATTCATGTCTAATATCCAACAGGTCGATTTCACTTCTTGAAACCATGACTCTGATCAGGGTATCATCATCAGTGCCAGCCCCCT ....x:..xx.x:.....x......xx:...x.:x..xx.x...........:..:..:..x.x:..:..:.:x.....:..:..:.....:..x.................x.......x......x..x.....:.... 141M 105/141 74.5% 141/94230402 0.0% 0/141 0.0% 82972654 NA +3993 chr4 + 190214555 121669948 121669947 121670020 73 ACTTACCTTCATAGCATAATAGAGGGTCTCTGCAAGGTAGGCAGGTATACTTCGAATAGATTTCACTAAGAAA chr4 - 94230402 38699206 38699205 38699278 55531125 55531124 55531197 73 ACCTACTTTCATGGAATAATACAAAGTTTCAGCAAAATAAGCAGGCACACTTCGGATGCACTTCACTGAAAAA ..:...:.....:.x......x.::..:..x....::..:.....:.:......:..:x.:......:.:... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 82970742 NA +7205 chr4 + 190214555 121671544 121671543 121671656 113 TACCAACAGCAAGGAGTAGTTGCTCTAAATTGCCAGAAGTCTCGCGGTCAATGGTTTCCTCAATTTGAAATCCTGATATAGTCATGTACTTGTCAAACACTAGAAAAAATAAA chr4 - 94230402 38699814 38699813 38699926 55530477 55530476 55530589 113 TACCAACTGCCAAAAGCAACTTCTCCAAATCACCAGAGGTTTCACGGTCAATGGTTTCTTCAATTTGAAAGCCAGAAATAGTCATGTATTTGTCAAACACTGGAAAACAGAAA .......x..x.::..:.::.x...:....::.....:..:..:..............:...........x..x..x...........:............:.....x.x... 113M 91/113 80.5% 113/94230402 0.0% 0/113 0.0% 82971730 NA +6886 chr4 + 190214555 121672510 121672509 121672629 120 CCATACA-GATTTTTTTCACTCACCCTTTCTCAAATGAGACACACTTCGTGTTCCAAAGATGGTGATAAACTTTTCTTCATCTGTCCCCCATTTAAGTTCTCCAGCCTGAAATAAAGCCTG chr4 - 94230402 38701683 38701682 38701803 55528600 55528599 55528720 121 CCATACATGAACCATATCACCTACCCCTCCTCAAATGAGAAACACTTCGAGTTCCCAAGATAGTGATGAATGTTTCTTCATCTGTTCCCCATTTTAGCTCCCCAGCTCTAAACAAGACCTG .......-..x::x.x....::....:.:...........x........x.....x.....:.....:..:x.............:........x..:..:.....::x...:..::.... 7M1I113M 94/120 78.3% 121/94230402 0.0% 1/120 0.8% 82970827 NA +5057 chr4 + 190214555 121681666 121681665 121681763 98 TTTACCTTCTTCATAAACTTGTTTGATGGCTCTCAGTTCTTCAGGTGTCCTTGAAGCAATAATTTCTGTCAGTACTTTTTCATTTGTTCCAGCTCCCT chr4 - 94230402 38706488 38706487 38706585 55523818 55523817 55523915 98 TTTACCTTGCATATAAACCTGTTTAATATTCTGCACTTCAGCAGGTGTTCTGGAGGCAAGAATTTCAGTCAACACTTTCTCATTGGTTCCTGCTCCCT ........x:x:......:.....:..:x:::x..x...xx.......:..x..:....x......x....::.....:.....x.....x....... 98M 73/98 74.5% 98/94230402 0.0% 0/98 0.0% 82975178 NA +7439 chr4 + 190214555 121683354 121683353 121683492 139 TCCTTTTTACCTTCAAGGCATGTTTCAGTTCATAAGCATCATAAAGCCGAGAGGGTTTCATCAGAGCCACAATTAATTTTTCAAATTTTCCAGTTAGTTCTGATTTCAGGTCATCCAGAAGATCCTAACCCACAGAAAA chr4 - 94230402 38707368 38707367 38707506 55522897 55522896 55523035 139 TCCCTCTTACCTTGATTGCATGCTTCAGTGCATGAGCATCAAAAATACGTGCTGGTCTCATCAAAGATACCATCAGTGTTTCAAACTTGCCAGTAAGTTCTGATTTCAGGTCATCCACAAGATCCTAGTGCAGAACAAA ...:.:.......x.xx.....:......x...:.......x...xx..x.xx...:......:..x:..x..:.:.x.......:..x.....x......................x.........::x..x.:x... 139M 107/139 77.0% 139/94230402 0.0% 0/139 0.0% 82975986 NA +4797 chr4 + 190214555 121684672 121684671 121684779 108 CTTACCCTGCCAAACAGAGTCTTAAAAGCTGCAGAGATTTCCTGGCGCTGAGCATTACTTCGGGATGTCAACAGAGTCAGGATGCTCTCCTCATCTGTGCCTGCAATT chr4 - 94230402 38709237 38709236 38709344 55521059 55521058 55521166 108 CTCACCCTGCCAAACAGTGTTTTAAAAGCAGATGCAATTTCTTGACGTTGAGCATTATTTCTGCTGGTAAGGATCTTCAGAATTGTCTCTTCATCAGTCCCTGGAGTT ..:..............x..:........x.xx.x:.....:..:..:.........:...x.xxx..x.:x.xxx....:..xx....:.....x..x....x.:.. 108M 78/108 72.2% 108/94230402 0.0% 0/108 0.0% 82975435 NA +3028 chr4 + 190214555 121685017 121685016 121685082 66 AGAAAAA---AAAAAAATATGTATATATATATATATATACACACACACATATATATATACACACACACA chr4 - 94230402 45271660 45271659 45271728 48958675 48958674 48958743 69 AGAAAGATTGGAAAAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA .....:.---:.....x:.:xx.:x.x:....x......:.......:......:......x....... 7M3I59M 50/66 75.8% 69/94230402 0.0% 3/66 4.5% 76413357 NA +3014 chr4 + 190214555 121685019 121685018 121685088 70 AAAAAAAAAAAATATGTATATATATATATATATACACACACACATATATATATACACACACACACACACA chr4 - 94230402 15682753 15682752 15682822 78547581 78547580 78547650 70 AAAAAAAAAAAAGTCTTATGTGGATGAATATGTACTTACACATACATACATTTACACCCTCACAAGCATA ............xx:x...:.:x..:x....:...x:.....:.:...:..x.....x.x....x:..:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 106002266 84212289 +3039 chr4 + 190214555 121685030 121685029 121685093 64 ATATGTATATATATATATATATACACACACACATATATATATACACACACACACACACAGACGC chr4 - 94230402 7596413 7596412 7596476 86633927 86633926 86633990 64 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC ...::x..::...:.x..:....:......:...:....:.x...:.:..x:..:...:x.... 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 114088617 76125938 +3236 chr4 + 190214555 121685031 121685030 121685114 84 TATGTATATATATATATATATACACACACACATATATATATACACACACACACACACAGACGCAAATACACACATATATATAAA chr4 - 94230402 8395791 8395790 8395874 85834529 85834528 85834612 84 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA .:.....:.:.::...x.:..::.:x:...:..:...::x....:xx.:.........x..:..x.x.....x..:x...x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 113289240 76925315 +3573 chr4 + 190214555 121685031 121685030 121685102 72 TATGTATATATATATATATATACACACACACATATATATATACACACACACACACACAGACGCAAATACACA chr4 - 94230402 8395799 8395798 8395870 85834533 85834532 85834604 72 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:..:...x.:..:...x..:.:.:::.::.x..:..xx......................:.....:x.:. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 113289232 76925323 +3566 chr4 + 190214555 121685912 121685911 121685985 74 GGTTTATAGCAAGCTTGTCCAACCCATGGCCTGCAAGCCACATGTGGCCCAGGACAGCTCTGAAT---GCAGCCTAA chr4 - 94230402 48654649 48654648 48654725 45575678 45575677 45575754 77 GGACTACTGCAGGCATATCCAACCCATGATCCACAGACCACATGAGGCCCAGCACAGCTTGCAATTTGGCaacctaa ..x:..:x...:..x.:...........::.::..::.......x.......x......:xx...---...:..... 65M3I9M 55/74 74.3% 77/94230402 0.0% 3/74 4.1% 73031263 NA +3046 chr4 + 190214555 121706045 121706044 121706094 50 ATTCATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681955 56681954 56682004 37548399 37548398 37548448 50 ATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG .....:...:....:..x:.......x...x...x....x.......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 65024090 NA +3001 chr4 + 190214555 121706164 121706163 121706222 59 CTCCTGGGTTCATGCCATCCTTGTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx.:.x::x.x........::..................x.::. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 103509025 86705530 +3614 chr4 + 190214555 121720701 121720700 121720774 74 CTGCAGCCTCGACCTCCTGGGCTCAAGCAATCCTCCCATCTCAACCTCTCAAGTGGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.....::x.:.x.xx:x....:...:......:.....:...:..x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 103523575 86690980 +3086 chr4 + 190214555 121724203 121724202 121724255 53 CATCTCAAAAA--ACAAAAACAAACAAACAAACGGAAACAACAACAAAAAAAACC chr4 - 94230402 68627821 68627820 68627875 25602528 25602527 25602582 55 CATATCAACAGCTACAAAAACAAACAAACAAACAAAAATAACAGGAAAAAAAATC ...x....x.:--....................::...:....:x........:. 11M2I42M 44/53 83.0% 55/94230402 0.0% 2/53 3.8% 53096382 NA +3050 chr4 + 190214555 121724204 121724203 121724253 50 ATCTCAAAAAACAAAAACAAACAAACAAACGGAAACAACAACAAAAAAAA chr4 - 94230402 62046172 62046171 62046221 32184182 32184181 32184231 50 ATTTTAGAAAGAAGAAACAAACAAACAAAAGCAAACAACAACAACAAAGA ..:.:.:...:x.:...............x.x............x...:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 59678032 NA +3106 chr4 + 190214555 121789207 121789206 121789283 77 TGGGGCTTTTTGTTTTGGGTTTGGGGGGGGGGGGTTGTTTGTTTGTTTGTTTGTTTTGGTTTTTCTTATTATTGTTG chr4 - 94230402 23981529 23981528 23981605 70248798 70248797 70248874 77 TAGAACCCCTGGATTCAGTTATGGGGAGTTGGGGTTCATTTTTTGTTTGTTTGTTTTGGATTCTTTTTTTTTTTTTG .:.::.:::.x.x..::.x.x.....:.xx......xx..x..................x..:.:..x..x..x... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 97807678 92406877 +14279 chr4 + 190214555 121802661 121802660 121803025 365 TTTATCTTTGCAGAGTTCTTGGACAGGTTTCCTGTGAACTTGTGTCTCCAAAACTCAATCGGGCAACAGAAGGTATTCTTTTTTTTAACCTTGAACTCTCTCAGATGGCCGCTCCAGCTTTCGAACCTGGCAGGTATTTAAATCTTTTTCTTAAGTTGCTTTAGTCATAGGAGAACCTAACAGCAGTGAGCTTTTGTTTTAATACCTGGTGTTATATTTCATGAC----ATTAGCCCATTCCTATTTTCTCCTTATAGGCAGTCAGATCTCTTGGTGAAGTTGAATCGACTCATGGAAAGATGTCTAAGAAATTCGAAGTGTATAGACACTGAGTCTCTCTGTGTTGTTGCTGGTGAAAAGGTGGGGAA chr4 - 94230402 38743298 38743297 38743652 55486751 55486750 55487105 355 TTTCCTTCTGCAGGGTTCTTGGGCAAGTCTCGTGTGAACTTGTTCCCCCGAAGCCAAATCGGGCTACAGAAGGTATACTTTTCTGTAACCTTGAGCTCTCACCAATGGCTGCACCTGGCTTTGAGCCTGGCAGGTACGTAG--CTTTCTCAAAAGTC----------CGGGTGAGGATAACAT--ATGAACGAGTGTTTTGGCACACACGGGTGTGTAGCATAATTATGTTTAATCTGGGTTAATTTTGTTTGAACAGGCAATCTGAGTTATTGGTGAAAGTGAACAGACTTATAGAACGATGCCTGAGAAATTCCAAATGCATAGATACTGAGTCCCTCTGCGTGGTTGCTGGTGAAAAGGTAGGGGA ...x::.:.....:........:..:..:..x...........x:.:..:..:.:x........x...........x.....:.x.........:.....x.x:.....:..x..x.x:..:..:...........:x..:--....:..xx....:----------::..x..:xx.....x--:...:.xxx......:::..x::xx.x.:.:.xx...:.:----x...::.::xx::x.....x.::xx.:.....:..x..x:.x........:x....:x....:..:...x....:..:........x..:..:.....:........:.....:..x.................:...:. 141M2D14M10D16M2D40M4I140M 247/351 70.4% 355/94230402 0.0% 18/351 5.1% 83059363 NA +9512 chr4 + 190214555 121804618 121804617 121804764 147 TCAGGTTTGGCAAATACGTGTAGACCTACATTTATTAAATCATGATGGAAATATTATTGATGCTGCCAGCATTGCTGCAATCGTGGCCTTATGTCATTTCCGAAGACCTGATGTCTCTGTCCAAGGAGATGAAGTAACACTGGTAAG chr4 - 94230402 38744437 38744436 38744583 55485820 55485819 55485966 147 TCAGGTCTGGCAAATTCGTGTGGATCTGCACCTGTTAAATCATGATGGTAACATTGTTGATGCTGCCAGCATAGCAGGAATTGTGGCTCTGTGCCATTTTCGCAGACCGGACGTTTCTGTGCAAGGAAAAGAAGTAACAGTGGTAAG ......:........x.....:..:..:..::.:..............x..:...:................x..x.x...:.....::.:..:.....:..x.....x..:..:.....x......:.x.........x....... 147M 119/147 81.0% 147/94230402 0.0% 0/147 0.0% 83060181 NA +6717 chr4 + 190214555 121807526 121807525 121807627 102 TTCTTTTGAAACAGTATACACCTGAAGAGCGTGATCCTGTACCATTAAGTATCCACCACATGCCCATTTGTGTCAGTTTTGCCTTTTTCCAGCAAGGGTAAG chr4 - 94230402 38744954 38744953 38745053 55485350 55485349 55485449 100 TTCTTTTCTAA--GTACTCTCCTGAGGAGCGCGATCCTGTGCCCCTGAGCATCCACCACATGCCTATTTGTGTCAGTTTTGCCTTCTTCCAGCAGGGGTAAG .......xx..--...:x.x.....:.....:........:..x:.:..:..............:....................:........:....... 11M2D89M 85/100 85.0% 100/94230402 0.0% 2/100 2.0% 83062572 NA +3580 chr4 + 190214555 121809064 121809063 121809131 68 CTGCAGCCTA---CTTCTGAGCTCAAGTGATCCTCCCACCTCAGCCTTCCAAGTAGCTGGGACTATAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.....:.---......:.:.......x.:.x.xx:x.........:...........:....:.x... 10M3I58M 53/68 77.9% 71/94230402 0.0% 3/68 4.4% 103611938 86602617 +10023 chr4 + 190214555 121809953 121809952 121810101 149 AACATTCATTTCAGAACATATTTATTGGTGGATCCCAATGAACGAGAAGAACGTGTGATGGATGGCTTGCTGGTGATTGCCATGAACAAACATCGAGAGATTTGTACTATCCAGTCCAGTGGTGGGATAATGCTACTAAAAGATCAAGT chr4 - 94230402 38745275 38745274 38745423 55484980 55484979 55485128 149 AACCTTGATTCTAGGACTTATTTGTTGGTGGATCCAAATGAACGAGAGGAACGCGTAATGGATGGCCTCCTTGTAATTGCCATGAATAAGCATCGTGAAATTTGTACCATCCAGTCTAGTGGAGGGATTATGCTATTAAAGGATCAGGT ...x..x...::..:..x.....:...........x...........:.....:..:.........:.x..x..:...........:..:.....x..:........:........:.....x.....x......:....:.....:.. 149M 123/149 82.6% 149/94230402 0.0% 0/149 0.0% 83064678 NA +4373 chr4 + 190214555 121811579 121811578 121811652 74 ATAGGTTCTGAGATGCAGTAAAATCGCTGGTGTGAAAGTAGCAGAAATTACAGAGCTAATATTGAAAGCTTTGG chr4 - 94230402 38745535 38745534 38745608 55484795 55484794 55484868 74 ACAGGTTCTGAGATGCAATAAAATAACAGCTGTTAAGGTTGCAGAAATAACAGAATTAATTCAGAAAGCTTTGG .:...............:......x:.x.x...x..:..x........x.....::....x:x........... 74M 59/74 79.7% 74/94230402 0.0% 0/74 0.0% 83066044 NA +10032 chr4 + 190214555 121813232 121813231 121814048 817 AGGAAAGAAGGTGGAAAGTTTGGTTTTGCAGAGTCTATAGCAAATCAAAGGATCACAGCATTTAAAATGGAAAAGGCCCCTATTGATACCTCGGATGTAGAAGAAAAAGCAGAAGAAATCATTGCTGAAGCAGAACCTCCTTCAGAAGTGTATCTTTATTTGGTGGTTTTTGCAGTAACAAGATTCATAACACTTGGCATTATAATATTAGGCTATATGAAGGATGTGTATACTGAAATTAGTTTTTGTAAACACTGTACTTTGTTAGAGAAAACACTTAAAATACAAGATAGAGATGTGAGTCATATTCTGTTGATGGTATAACATTCAGCTTCTATTCAGTTATCCTGGAAAAAACAGATTTTAAGGACCAATTTAATTTAGTACTATAACTAAAATGTTGAG---AGAATCTGTCTCTTCACATTTCTTATTAATTGCATCCATAAAATCTTGCCTGAGTTTTTTTTCTT---CTTCATTGTTCAGCCATCCATAGTGTAGCTATATTAAGTTTTTTTTCCCCTAGGAACTTGGGGCACACTTGAATCAATCTTACAAGAAGAAAACTTTCATTCTCATCTTCAACAGTTCATCAAATAGCAATATTTTTGTTACTCA-GTTTTCTTAACTTGTTAAGTGTTTCTACACCTGTGCTATGGACTCCTGGAACTGCCCAAATTGGAGAGGGAGTAGAAAACTCCTGGGGTGATCTTGAAGACTCTGAGAAGGAAGA------TGATGAAGGCGGTGGTGATCAAGCTATCATTCTTGATGGTATAAAAATGGACACTGGAG-TAGAAGTCTCTGATATTGGAAGCCAAGG chr4 - 94230402 38746585 38746584 38747272 55483131 55483130 55483818 688 AGGAAGGAAGGTGGGAAGTTCGGCTTTGCAGAATCTATACCGAATCAAAAGATCACTGCCTTCAAAATGGACAGTGCTGCTGTGGATACCAACAATGTGGAAGAACAAGCAGAAGAAATCATAACTAAAGCTGACCCTCCTTCAGAAGTGTATGTTT-TCTATTTATTATTCCAG----GAGGATAAAAAGTCTTCCCCTTAT-----------------------------CTG-CATTAGCCCT------CCCAGTAGCTAGT-----GGAGCACCAAAGCTATCTGATGGC--------TCAGGGTAGCCTCATAGCCTAACCTTACACTGCT-TTTAGTTCT---------GACTGCTTTTA---GCTAAGTTAATTCTTAACAGAAAGTGCAAAACAGGGTGAAGTAGCTAGCTGTT-ACACT-------------ATCTGGAGAA--------GAGTATTCTTTCTTAACTTCCATTG--AAGGCCTGAGGAGAAAAGTTA-------------------------------------CTGAACTGAACTT--AAGCTGAAAATCAATTGTTTTGCCTTCATC-----------CAGTGAGATTACTAACTCCAACATTTTCTTAACTACTTCAGTTTTGCCAAACCGATATTGCACACTCCCGGCACAGCCCAAATTGGGGAAGGAATAGAGAATGCCTGGGGAGACCTTGAAGAATCTGAGAGGGAGGAAGCAGCAGAAGAGGAAGGTGAAAGCAGCACTACTGCTTTTGAATGCCAGAGGACAGAAACAGAAGATACAAG--TATGATGAATGAAGCTAAAG .....:........:.....:..:........:......x.:.......:......x..x..:........x.:x..:x..:.x......xxx:....:......x................x:..:....x..x..................x...-.:.:x.x:..x..x...----:..:x.x.x..xx...xx.x....-----------------------------...-x.....:::.------.x.x...x:.x..-----::.:...:x..:x..:xx...:.x--------...x:x.xxx:.x..:.:x....x..xx:..x..-..:....x.---------:..x.x.....---:.:..x......:xxx..x:x..x.:x..x::x.:.---..x.x..:x..x..-...:.-------------...::x.:..--------....x..:......---:.:.....--x..x.x.xx:x..x:x..:..-------------------------------------:....:::.x...--...xx.....::xx:xx.:.:::.....x.-----------:..::.x...x:.:x:x.:x.-:...........xx..x...x..x.:.x...x:.::.:::x.....:..x..x...........:..:...:....:..:x.......x..:........x.......:...:..------x..x..:.:x....:x:::x:x:...::::.:....xx.:xx:.::.::..x..x.:..-..x...--.x....:xxx.....:..:. 157M1D17M4D24M29D3M1D10M6D13M5D24M8D34M1D9M9D11M3D36M3I14M1D5M13D10M8D14M3I8M2D21M37D13M2D30M11D21M1I115M6I59M1I6M2D20M 441/674 65.4% 688/94230402 0.0% 157/674 23.3% 83066647 NA +4483 chr4 + 190214555 121816333 121816332 121816451 119 TTTTTTTTTTTTTTTTAAATTAATAAAAAAACAAAGATGCTCCCATAATACTCTCAGATAGTGAAGAAGAAGAAATGATCATTTTGGAACCAGACAAGAATCCAAAGAAAATAAGGTAA chr4 - 94230402 38747597 38747596 38747703 55482700 55482699 55482806 107 TTTTTAATTATTTTTTAATTCTA------------GATGATCCTATTGTGCTGTCTGACAGCGAAGAGGAAGAAGTTGTCATTCTGGAACCACAGGAAGTACCAAAGAAAACAAGGTAA .....xx..x........x.:x.------------....x...:..x:.:..x..x..:..:.....:......:.x:.....:........x.x:.::xx..........:....... 23M12D84M 79/107 73.8% 107/94230402 0.0% 12/107 11.2% 83068736 NA +10474 chr4 + 190214555 121817413 121817412 121818925 1513 AATACTTTAACAAAACCACTTAAAATTAGCCAAATATCTAAGACAGAT-ACATATACAAAAGATATACAAATTAAAACCATTTAAAA--------AGTAATAGAT--ACCATAATTTGTACTTGGCCACAACTTCTGTATTCAGAAATGATTGTAAAATTAAAACCTAAGTTAAAAACTGTACACCATATACTTTGAGTGATTTACATCTTAGAAAACAAAGGC--AGTCT-TTCATTGTTACAGATTTAGTGTCTCTGGTGGGTTGAGGAGAGAAACACCATGATACCTGTAAGTAGGGAAAAAAAAAGCA------------------TTTTTAGTAAACACTCACTG-GGTAAAGGAGATCATGGAATAATGTTTGTACTCATGTATTGGGAACTAAAAAATGCTATTTCT---GTCTGACCGACTTGATGGTTTTAGAAACACTGTCTGGTCCCTGAAACACACATGCAT------GCCCCCTTCCTTCTCTCTTCTCCCCCAGACCCAGGGCAGAAAGCATGAACTACAACCTTCTTCAA---ACACATAACCAATTTAGAGAACAGCTT------CTCAAGGAGGCT--------ATGGCAGATTCATGAATAAGGTT-------AAAATGTCAAAGATCTCTG-AACCAT------------AATCTAG--AAAAGTAAGCTTCAATATCCAAGTTAA------------------------------------------------------------TTCTTACTTTGAATTTTTGTACTTTTCTCTTATTGACTGTTGTGCATGCTGTGGTGCTTTGAGGTAGGTCTGGTGAAGGTCCATGAGACAAGGCTTAAGACTTTCCAGGGTATATCCAGTCTTTCGTATTAATGATTCAGGCTACAGAGAAGGGAATAGAGAACCCCTGAGTTTTGCTTTTAGTAACACACCAAACACAGTAAATAGTTGGCATTAAGCTTATGTTAAATTCCAGTACTAATCTTTAACTTTTCCAACT--ACTAGTTTTCTCAGGCCATTATTCCATCCCTCGATCCATTTTCTACTACTTTCCCTGCCAGCAACAGGTCAGATGCTTTTAAAAAAGCTCACCTTTCAATCCAAGTTACAACTAAGCTTACTA----CCTAACAAACACTGTTCAACAGGTAACATGCCTTAAACAGTATATAATCATCCCTCAGTG--TACATGAGGGATTGGTTCCAGGACCCTTCCCAAATATACCCAA---ATCTGTACATATTCAAGTCCTGCAGTCACCCTTCCATATATATGGGTTGTGAATCCCCTGAATACTGTAGTTTCAGTCCACATTTGATTGGAAAAAAATCCATGTGTAAGTGGACTCACACAGTTCAAACCTGTGTTTTTCAAAGGTCAACTATATATATTTGAAGTTTTTCCAAGTAAGAACATCTAGGCAACCCTCAGTTTTGTAGGACAATTATTATTTAATCTGGCACAGGCATTTCAGTCA-----------------CAAG-------ATAGGTGTGTGAAGACC---------GTAATACATACCCAGCTTTGTCCCGTGACTGTGTAGAGTGCTAAATGAAAGGCAGCTCCAGCAATAACTGATGGCAAATACTTGAGGTATGGGTCAGCATCTATCAAACTTAATTCTCCCAAAAACTGGAATAAAAA chr4 - 94230402 38751542 38751541 38753052 55477351 55477350 55478861 1511 AACATTCTTATAAAAACA--------TAGCTACATATTTTAAGAAGATTGCATGTACAAAAGATTTACA--TTAAAACCACATAAAACTAACTTCAGCATTAAGCTCATCAAAACCTGCATT----AATATTCTGAGTAATCACACCTAG-----AACTTTGAACCACGTTTAAAAACTGTACATCATTTTCTT---GTAATATACATCTACGTATTTAAAAGATAAGTCTCTTGATTATTACAAATCTAGTGTCTCTGGTGCGTCAATAAGCGATACTGCATGGTACCTG-GAGAAGGGAAAAAAAACACAAAGAGATGCAAGATGGAATCTTGCTGAAGTGCTCTCTGCTGTAAAAAATGACATGGA----------TACT----------GCAGTAAAGCACATTCCTTACAAGGCTCAGCCAGCTGGAAACATTTTGGAGCAC-GTC-AGCCGCCGCGCCA-ACATGGATTTTTTGGAGCATTACATGCACTCTCCTGCCT---AGCAATGGTAGGAATTTCCAAGT-CAAT-TGCTCCAGTTTCCACCTGAC-AGTTCAGGCAGCGGTTTGGGTAGTGACAGTAGGCCTGGTGAACATGGCACATTGCTCAACAAAGCACTGTGCAAGGACCTTGAGGGTCTCTTCAACCATTTCACTTACACCACTTTGGTGCAACTTCAGCCTC--TTCCCAAGTTAACCCACCCAGTCCCAGTTAAGCTCAGGCACAGCAGACTGGCTTACCACACATCTCTGCAGATACTTACTTTGTGCTCTTGTACTTTTCCCTTATGGACTGTTGTGTGTGCTGTGCTGCTTTGAGGTAGGTCCTGTGAAGGTCCATGAGGCAAGGCTTAATGTGTTCAAGGGTGTAGCCTGTCACCTTGCACAGAGATTCAGGCTGAGGAAAAAGGGAAAAAGG-------------------AGGAACAC-TGAAACAC-------------------GTTTATGTC--ACTCTGGTGGAGGTTTTCAAGCTTTCCTGTTGAAACAGTGTTGTC---CCAGTATGCTGGC---AGCGTTGTTATCT---------CAAGCACAAAGCAGCTCAATCACT---------GCCCAGATTTGAAGT---GTTCCTGC-AGACCTACGGGAATCCTGAGAATTACTGT------------ATTCTTT--GCAGGGCAGAAGTATTCCTCCTTGCCTTCATTACTGA--AGCTTTCTGCCCACTCCTTCAT---CCCAAGGGAGCTGTTC-TATTCA--TCCTCC--TCAAAGTTACAAACACA------ATGCAACCACAGATGCCTCTGCCTTC---CCA-----------AAAAGGGTACGTTCCTATCT---TTCAAATACCACAGTCCT---TCTTTAACAGGTTACTGGTATG-----AAAGGGCTGCCAACT----CCAGCAGCCCAAAACTCAACAGCGTAGGCC--CCAGCACTCAA---AATACAGGCATACTAGGCATTTCCCTTTGACTACACTAAGCATGCGTAAAGGTACGTGAAGGCTCAAGTCTTAGTGTTACATACCCAAGTTTGTCCAGTGATCGTATAGCTTGCTAGATGAAATGCTGCTGCAGCAATAACTGATGGCAAGTATTTCAAGTAAGGATCAGCATCAATTAGAGTCAGCTCTCCAAGATACTGCAAGGAAGA ..:.:.:.x.:....x..--------....:.x....:.x.::x....-:...:..........x....--.........:x.....--------..:.x..:::--.:..x..::..:.:.----x.:.x::.xx...x...x.xx.::-----..x..x:....xx:x..............:...x.x...---..:..x.......xx.x.xx:...:.x--.....-..x...:.....:..:..............x..::.x:..x..x..xx....:......-:..x............x:..------------------.:..xxxx..:::...x...-x.....::.x:x......----------....----------.x.x....:x.:::.x:..x:---.:::::..::..x..x:xx...x.:.:...-...-:.:.x.:.x:x..-.....x..------.xx.x:.x.x.x.x....:..x..:---.x.x.x..:..:..x:x:x..x.-...:-.x..:..:---x...x.:..-.:..:..:x.:.:.:..------:xxx..x....:--------......x...xx.x..:..:.:x-------.::.:x.::.:.:.....x-......------------.x.:.:.--x..xx.x...:..--.x:.........------------------------------------------------------------.x.........x::.:...........:.....x..........::.......x................:x...............:..........x::x...x.....:..x..x...x:::xxxx:.:x..........:x:..:..:..:.x.:..:-------------------..x.....-:x......-------------------.:......:--.:..::..:xx::.:..:..x:.....x::.--.x:...x..x..---...x...x.::x.---x.xx:::..x...---------.xx..xx:x.:...x...:x::..---------..:..xx...x..x:---...x.x:.-.::.:...x:----...:.x..x:.....------------..x.:..--:...x::.x..x:..:....xx..--.x...x.xx..--:.:.::xx.x..x:...:xx..---.....---.x....x.-......--....x.--...xxx..x..x.:.:.------:..x.x..x.x..xxx..x.:x:...---...-----------....:::.x.:.x:x..xx.---:...x.:.x:x..:x...---.:...x.x....:.x:x:...:-----:...xx:.x....x.----x..x.x:xx...xx....::xx:.....x.--::.x:.:.:..---:::........x::..x..-----------------:...-------.x....::......:.:---------..:x..........:x.......x....::..:...xx.....:......x..x...x...................:..:..x.:...x..:........x..:.:.x.:.::.....x.:.x....x..x:..:. 18M8D22M1I20M2D16M8I10M2I15M4D24M5D39M3D27M2I5M1I59M1D20M18I20M1I18M10D4M10D21M3I30M1D3M1D13M1D8M6I25M3D23M1D4M1D8M3I9M1D17M6I12M8I23M7I19M1I6M12I7M2I13M2D12M60I162M19D8M1D8M19D9M2D31M2I12M3D13M3D13M9D24M9D15M3D8M1D10M4I15M12D7M2D24M2I11M2D22M3D5M3I8M1D6M2D6M2D17M6D26M3D3M11D20M3D18M3D22M5D15M4D30M2D11M3D19M17I4M7I17M9I137M 871/1326 65.7% 1511/94230402 0.0% 372/1326 28.1% 83065871 NA +13544 chr4 + 190214555 121819367 121819366 121819592 226 CTCACCATTGCTAAACTTTCAACTTTGCAGTTTGCAGGCTGCTGATGCAGAAAGTATTGGGTAAGAAACTGATTTACTGTTGGAGCAGCTAAGTCAAAAGTAAGGACTTTCAAAACTAGATGCTCCATTCTCAGAACTTGTTTCTTGGTGTAGGTATCATCTGTAATGTACACAAACTCTGCTACTTCTGGGGGGTATATTTCTTCAAACTTTCTACAATGAAAAA chr4 - 94230402 38754034 38754033 38754256 55476147 55476146 55476369 223 CTTACCATTGATAAGCTCTCAACTTTAGCATTTGT---CTGCTGATGCAGGAAATACTGAGTGAGGAACTGGTTGATCGTCGGAGCTGCCAAATCAAATGACAAAACCTTCAGAATTAAGTGCTCCATCCTCAGAACTTGCTTCTTGTTGTAGGTGTCATCTGTGATGTAGACAAACTCTGCTACTTCAGGGGGGTAGATTTCCTCAAACTTCCTGCCACGAGAAA ..:.......x...:..:........:xx:....:---............:..:..:..:..:..:.....:..x.::..:.....x..:..:.....x.xx.::..:....:..:..::........:...........:......x.......:........:.....x.................x........x.....:........:..:.x.:..:... 35M3D188M 176/223 78.9% 223/94230402 0.0% 3/223 1.3% 83065333 NA +17387 chr4 + 190214555 121820536 121820535 121821097 562 ACTTACGAGGCTAACAGCATAGCAGCAGTGCCCACAAGCTGAAGTTTTCCTCTCAGCACTGACATGGAAGACAGGAACCTATCAATGTAGTTCACAGCCAAATGCAGGGTCTCATTCTGTAGTTTATATTCTTCTCCTACTTCAACTAACCAGTCCACGAGGATAGCTCTCATACTGTTAGTGATGTCTGGCTGTTTCTTCATGTAACCCACTTTAGGTTTACATTTAACCTATTG-----------AGAAAA----------------------------------------------TTATTTATAGTGTTAAAATTATTCT-------------------AGTGTAAAAACTGCAATTAGA---------TTATTTTACCAT-TAATTACGAGAGGCTACATGCTATAAACTTAACTGTA-GCATTAGAATAATTCATTAGTTTAAAAATTTA-------------AACATTATCCT---CTCAATTTCATTTAGCCACATTTAACAAATACATTATACAAACTGGATTCAGAGAAC--------CTTTACCTCCATTTCCCTAAGGTATGTGTGAATATCCTCATGGTAGTCTGGTACTTCATTAACACTCACTGGCTTTTCATCTTCTAATATAATTGACATGTCCATAGTATGTGGTGACTCTGGGA chr4 - 94230402 38754755 38754754 38755404 55474999 55474998 55475648 650 ACTTACGATGCGAGCAGCATAGCCGCGGTACCCACAAGCTGAAGCTTTCCTCTCAAAACAGACATTGAAGATAGAAACCTGTCAATGTAATTTACAGCTAAGTGCAGAGTTTCATTCTGGAGCTTGTACTCTTCTCCAACTTCCACCAGCCAGTCCACCAGAATAGCCCGCATGTTGTTGGTGATGTCAGGCTGCTTCTTCATGTAGCCTATTTTAGGCTTGCATTTTACCTGCAGGTTCAGACGACAGACAAGGCTGAGTTTGGACGGGGCGCCTGCAGGGAAGCAGTCACTCATACTCCATTTACCGTATCTAGATTGTTTTTAACAGGTCACAAGCAAGCAATGGTAAATCTGGACTCAGAAAGCTGCATTTGTATCAGCATGTGCTCGGTGGAGAGCACAGCC----AACCTGGCAGCAGGGAGCAGGGGAACTTACTCATTCCTAGCTTTACTTCAGTCACTGCAGCAGTAACTTATCCTCGGGTGCACTCAGCC--------CAAA-----TATGCAAAC------AAGAGAACAGGCGGCACCTCACCTCCATTTCCCTAAGGTACGTGTGGATATCGCTGACATAGTCTGGCACATTGTTAACGTTTGGTCTCTCTTCTGCTTCTGAAGTTATCGAGATATCCATGATACTCGGGGAATCTAGGA ........x..x.:.........x..:..:..............:..........:x..x.....x.....:..:.....:........:..:.....:..:.....:..:........x..:..:..:........x.....x..:.:.........x..:.....:.x...::....:........x.....:...........:..:.:......:..:.....x....::x.-----------...x..----------------------------------------------::.....:x..:.:x.:...:..:.-------------------.:..xx...x...x.x.:...---------..:.x.:.x...-.:x.::xx:...:x:...xx.----...:.::.x.:.-.x.x:..::x..:.:.:.x:..:xx.:x....-------------.:..x..x.:.---...::x.x..:.:....--------....-----...:.....------x.......--------.:.:....................:.....:.....x:::xx:........:..x.::.....::.::x.xx..:...xx.....:.x:.x..:..x..:.....::..:x:..x..x...:... 236M11I6M46I25M19I21M9I12M1I21M4D12M1I32M13I11M3I17M8D4M5D9M6D8M8I125M 386/539 71.6% 650/94230402 0.0% 134/539 24.9% 83065781 NA +6254 chr4 + 190214555 121825864 121825863 121826005 142 GCTGCATCGAAGAATGAAATCAATGCATTTTGGTCATAACTGTCCAGAATTTCCAATAGAAGGGGTACTTTAGTTTTTACATTGGTGCCTTTAAACTTAAATTTATCTATGAAAAGATCAGTGATCATGCCTTTAAAGAAAA chr4 - 94230402 38757722 38757721 38757863 55472540 55472539 55472681 142 GCGGCCTCAAAGAAGGCGACGAGCCGCTCCTGCTCGCAGCCATCCAGCAGCTCCAGCAGCAGCGGAACTTTGCTCTTCACGTTGGTGCCTCGAAACTTAAATTTATCTATGAAGAGATCCGTGATCATCCCTGCAAAGGTAA ..x..x..:.....x.x:.:x.::xxx.::..x..::.:.::.....x.x:....::..x..x..x.....:x.:..:..:.........:x.....................:.....x........x...x:....:x.. 142M 99/142 69.7% 142/94230402 0.0% 0/142 0.0% 83068142 NA +3014 chr4 + 190214555 121826974 121826973 121827016 43 CTCTGTCTCAAAAAACAAACAAACAAACAAACAAAAAATATAT chr4 - 94230402 71871112 71871111 71871154 22359249 22359248 22359291 43 CTCTGTCTCAAAAAACAAACAAACAAAAAAAGTAAAATCATAT ...........................x...xx....x:.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 49955862 NA +7795 chr4 + 190214555 121828140 121828139 121828300 161 ACTAACCATAGAGTCTTTCAAGATGTGCAGGTTGCTTTTTGTATTCTTCCTGTAGGTGATCTGCCTCTTCTAGAATACAGTGATATTCTGGTATCAGAAAGTTCGTATTTCCCTCATGAATCTGTAATTCC-------TATTT-----------AAAATGAAAAACAG--AAGCACCTTAA chr4 - 94230402 38758473 38758472 38758653 55471750 55471749 55471930 181 ACAAACCGTAAAGCCTCTCAAGATGCGCAGGTTGTTTCTTGTATTCCTCAAGCAGCTGATCTGCCTCTTCCAAAATGCTGCGGTATTCTGGCACCAAGAAATCCACGTTTCCTTCTTGCACTTGTAATTCCTCAAAGATATTTTACATCGTAAAAAAATCAAAGGCAGTTAAGTAGCTTAA ..x....:..:..:..:........:........:..:........:..xx.:..x..............:.:...:.x.:.:........:.:..::..:.:.:::.....:..x..x.::.........-------.....-----------.....x...::...--...:.x..... 131M7I5M11I14M2I11M 123/161 76.4% 181/94230402 0.0% 20/161 12.4% 83069667 NA +8741 chr4 + 190214555 121828475 121828474 121828735 261 AAAGTGTGTTTGACTGATACTTCATTTATCTCTAGAAGGAGTTGACCAGATGCAGTTAGATAAATCAC----------------------TTTGATCAGAAACATTAATAATGTAACAACA------------------ACACAAAATAA--------ACATCAGAA-AGAATTATTAATTTTGTTTGTTTACCGTATGATATGTTGAGGTTAATTTTCCTTTTTGTAGCTTCTTTAGAAAGCACATCTTTTAGGATGGAGATAGTAGAAATGTTGTCAGATTTAAAAACTCCCTCTCCTTTTCTATAAA chr4 - 94230402 38760399 38760398 38760697 55469706 55469705 55470004 299 AATGTATGCCTCACAGATTCTTCATTTATATCTAGTAGCAGAaaacaaaaaacagatgaacaaaaaacaaacaaacaaaAAACCCCCACACCCCAACAAATGAATGAGCAATACATCAATACATATTCCATTGATGAGAATATAAAATGATGCAAAGGACAATAAAATAGAAGAAGT-----------TTTACCAAATGATATGTTGAGATTAATCTTCCTTTTAGTAGCCTCTTTGGAAAGCACATCTTTTAGGATGGATATTGTAGAAATATTGTCAGACTTGAAACATCCCTCACCTATTCTATAAA ..x..:..::.x..x...x..........x.....x..x..xx:..x.:.x:...x.::.:...xx..----------------------:::x.x..:.x:x..x.::...::.x...:.------------------.:.:.....:.--------...x:.:..-....xx.x.-----------......:x.............:.....:........x.....:.....:.......................x..x........:........:..:...xx......x...x......... 68M22I31M18I11M8I9M1I9M11D122M 186/250 74.4% 299/94230402 0.0% 60/250 24.0% 83068076 NA +3003 chr4 + 190214555 121832001 121832000 121832047 47 AAAACAAAAACACACACACACACACACACACACACACACACACAAAA chr4 - 94230402 56248436 56248435 56248482 37981921 37981920 37981967 47 AAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAA ...:....:...x...............:.....x...xxx...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 65583565 NA +3084 chr4 + 190214555 121832323 121832322 121832386 64 AAACAAACAAACAAAACAAACAGCAACAACAACAAAAAAACAAAAACAAAAAACAACCTACAGA chr4 - 94230402 8876756 8876755 8876819 85353584 85353583 85353647 64 AACTAAACCAACCAACCAACCAACAACAGCAACAAAATAATAAAGAAAAAAAATAAACCCCAAA ..x:....x...x..x...x..:.....:........x..:...:.x......:..x.:x..:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 112955567 77258988 +11066 chr4 + 190214555 121833226 121833225 121833412 187 TTTACCTGTAGGTACTTTCAAGTTGTGTATCTAGAAAGGTGTTCTGAAAGTAAAATGTCACACATTCTCCTGCTGGAGGTTTTTCTGGAACTTCAGGCAGACAAAAAACCACCCAGGAGTGAACTTCAGCAAAACTGAACTGGCCTGTTAGGGTCAGTGTATTCATGGGTCTGTAATATAATAGTAG chr4 - 94230402 38761158 38761157 38761344 55469059 55469058 55469245 187 TTTACCTGTAAGTACTTTCAAGCTGGGTACCCAGGAAGGTGTTTTGAAAATAAAAGGTGACGCTCTCTCCAGGTGGAGTCCTTTCAGGGACTTCAGGCAAGCAAAACACAACCCAAGAGTGAATTTCAGCAAAACTGAATTGTCCTTTGAGCGTCAGTGTATTCATTGGCCTATGACAGGATGAAAG ..........:...........:..x...:.:..:........:.....:.....x..x..:.x:.....x.x.....x::....x..:..........::.....x..x.....:.......:...............:..x...x.x..x..............x..:..:.:.:.x:..::x.. 187M 146/187 78.1% 187/94230402 0.0% 0/187 0.0% 83072068 NA +10065 chr4 + 190214555 121835096 121835095 121835311 216 TGAATTGTGT-AATATCCTAAAAAGAATTTGCTCTTTCCTTTGTCCT----------ACCTGTCATGATCAATAAAGTGAGTTCTTTGATGGAGTGAAAGAGGTTTGATGTGGTACTGGCGGACCTGACAGGTTTTGGGTTGAATTCTTGGAGTCACATATGCTTGTAGTGTGCCATACTGGCCTTCAATTGAGCGAATCTGATTCAACACAAAAGAGGAAATAAAA chr4 - 94230402 38762226 38762225 38762444 55467959 55467958 55468177 219 TGGCTTGTGTCAGTTTTTCGAAATAAATAGGCTTTTGTTGTTGTTATTGTTGCAAATACCTGTCGTGGTCAATAGAATGAGTTCGCTGATGAAGTGAAAGGGGTTTAATTTGGTACTGATAAACTTGGCAGGTTTTTGGTTGGATTCTTGGAGTTACATATGCTTGAAGTGTCCCATATCGTCCTTCAATCGATCGAATCTGA--------AGAAGAAAACGTAGAA ..:x......-.:.x.::::...x:...xx...:..x::x....:x.----------.......:..:......:.:.......x:.....:........:.....:..x........::::..:..:........x.....:...........:...........x.....x.....::.x........:..x.........--------.:....::.x:..:.. 10M1I36M10I146M8D16M 157/208 75.5% 219/94230402 0.0% 19/208 9.1% 83072870 NA +6115 chr4 + 190214555 121839594 121839593 121839723 130 CAAACATTCAAGTAA--------------AGGTAATTTCTAATATTTTTACCTTGAGTTCCAGCCTTGTAGTATCTGCCTGGCACCGATAAGTGGCAAGAAGGAAGTTGTCGTTTGACTGGGAAGAATACAAAGTGGAGGAAAA chr4 - 94230402 38764092 38764091 38764234 55466169 55466168 55466311 143 CAAACATCCACATAACAATTTCTTATGGAAAATAATTTAGAGCACTTT-ACCTTAAGTTCAAGTCTTGTAGTATTTGCTTGGCATCGGTAAGTAGCAAGAAGACAGTTGCCATTTGGCTGCAAATAGCAAAAAAAGGAGGGAAA .......:..x:...--------------.::......xx.::.:...-.....:.....x..:..........:...:.....:..:.....:........:x.....:.:....:...x:..x.::.x...:x.....:... 15M14I19M1D95M 97/129 75.2% 143/94230402 0.0% 15/129 11.6% 83075502 NA +3183 chr4 + 190214555 121842236 121842235 121842306 71 AGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAGAAAAAGAAAATTATTCTTTTATCTATCAATATTTT chr4 - 94230402 13761882 13761881 13761947 80468456 80468455 80468521 66 AGAGAGACT-----TTAAAAAAAAAAAAAGAAGAAGAAGAAGAAACATTCTGTTTTATCTACAGTTATTTT ..x......-----.:.............:..:.....:......xx.x:.x.........:x:x...... 9M5D57M 52/66 78.8% 66/94230402 0.0% 5/66 7.6% 108080354 82134201 +6749 chr4 + 190214555 121843907 121843906 121844047 141 TCTTTTATATTTTTACTCACCTCAGAATCACAGCTGCTAAAGCTAACAACAGCAGAATTTTTATCCACATCAAGTAAATCTATTGGAACATCACTCTATAGTCAATATTAAAAAAAAAGAAGGTTGAGATGGAAAACCTAA chr4 - 94230402 38765167 38765166 38765294 55465109 55465108 55465236 128 TCTTTTGT---TTCACTTACATCAGAATCGCAGTTGCTAAAACTAACAACAGCAGAATTTTTATCCACGTCCAGCAAGTCTACAGGGACATCACTCTGCAG----------AACAGGAGGAAGGAAAGATGTAGAGCTTAA ......:.---..:...:..x........:...:.......:..........................:..x..:..:....:x..:..........::..----------..x.::..:.:.xx:.....x.:.:.:... 8M3D90M10D30M 100/128 78.1% 128/94230402 0.0% 13/128 10.2% 83078740 NA +10437 chr4 + 190214555 121845493 121845492 121845706 214 ATTTTGCTTACCTGTATTAAGACATTATCTATTGCAGTCTGTACCTCTAAGATAAGGCTGTAACTGGCATCATCTTTATTTAGTGTAAATTTATCATTTATACCAAAGGAAGGTACTGCTGATTTTGCTTTGCTTGATTGAGAAGACTGTTGATAATTCTCTCTTTCCTGCAATACCTTATACTGCAAATGTTCCAACTCATTCCTGGAGAAAA chr4 - 94230402 38766067 38766066 38766280 55464123 55464122 55464336 214 ATTTATCTCACCTGTACCAGGATAATATCTATAGCTGCTTGCACCTCCAAGATGAGACTGTAGCTAGCATCATCTTTATTTAATGTAAACTTATCATTCACACTGAATGCAGGTACTGATGAAACAGCAGAACTGGACTGAGAAGATTGCTGGTACTTTTCACGTTCACCAAGTACTTTCATCTGTAAGTGTTCCACTTCATTCCTAGAAAAGA ....xx..:.......::.:..:.x.......x..x.::..:.....:.....:..:.....:..:................:......:........:.:..::..x.x........x...xx:x..xxx:..x..:........:..:..:..x..:..x.x...x:xx.:...:..xxx...:..:.......x:........:..:..:. 214M 154/214 72.0% 214/94230402 0.0% 0/214 0.0% 83079426 NA +6401 chr4 + 190214555 121847397 121847396 121847508 112 AAGTTACCGTAAGGAAGAAATTTTATTCTGCATCTCCTGATTAATTTTTAGTTCTTCTCCTGGTCCACTTTCCTTATGAATGGGCTCTGTTGTCAGACCTGTAACCCAGCCT chr4 - 94230402 38766818 38766817 38766929 55463474 55463473 55463585 112 AAATTACCTTAAGGATGAAATCTTGCTCTGCATTTCTTGACTTAGTTTTAGTTCTTCACCTGATCCACCTTCTCTATAGGCAAGTTCTGTAGTCAGTCCTGTCAGCCAGCCT ..:.....x......x.....:..::.......:..:...:.x.x............x....:.....:...::...::::::.:.....x.....x.....x.x....... 112M 85/112 75.9% 112/94230402 0.0% 0/112 0.0% 83080579 NA +5388 chr4 + 190214555 121848840 121848839 121848935 96 TTACCTGAATATGTGGACACCACGATTTCATCATAGCTGTCTTTTCCTACACAACCACCCTGGATAGATGTGACGCTTTCAGACAACATCTAAAAA chr4 - 94230402 38767713 38767712 38767808 55462595 55462594 55462690 96 TTACCTGAATATGTGCATGCTAAAACTTCATCATAACCATCTTTTCCGACACAGCCACCCTGGATTGATGAAATGCTCTCTGATAAAACCTTCAAA ...............x.::.:.x:.:.........:.::........x.....:...........x....x:.:...:..x..:..x.:..xx... 96M 73/96 76.0% 96/94230402 0.0% 0/96 0.0% 83081127 NA +3415 chr4 + 190214555 121851375 121851374 121851469 95 GCAGGAAAAAAAAAAAAAAGAAAGGAAAAAAGGAAGGAAGGAGGGAAGGAGGGAAGGAGGGAAGGGAGGGAGGGAGGGGAAAAGAAAGGGAAGAA chr4 - 94230402 40472539 40472538 40472619 53757784 53757783 53757864 81 GTGGGGGAAAAAAAAGAAAAAAAGGAAAAAA--------------AAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .::..::........:...:...........--------------........::..:...::....xxx.:.::.x.:......x:.:::.... 31M14D50M 57/81 70.4% 81/94230402 0.0% 14/81 17.3% 81378836 NA +9012 chr4 + 190214555 121852947 121852946 121853099 153 TGAACTTACCTGATCAAATCGTAGAACAGGTTCATTTGCATTATCAAAACTATACACTTCCACCATTCCGTCATCTCTCCCAACAAGTAAATCTTTAACCCCATCACCCACAATGTCAAAGCTGTCAATACACAAAATACCT--TTAAAAAGAGA chr4 - 94230402 38768585 38768584 38768739 55461664 55461663 55461818 155 TGGGCTTACATAATCATACCGAAGGACAGGATCATCTGCACTCTCAAAGCTATAGATTTCCAGCACTCCATCATCTCGCCCAACGAGTAACTCTTTAACTCCATCTCTCAGAATGTCAAAGCTATCAATGCATAAGATACCTAATGAAAAAGAAA ..::.....x.:....x.:..x..:.....x....:....:.x.....:.....x.:.....x..:...:.......x......:.....x........:.....x.:..x............:.....:..:..:......--.x.......:. 142M2I11M 122/153 79.7% 155/94230402 0.0% 2/153 1.3% 83084362 NA +6784 chr4 + 190214555 121854692 121854691 121854823 132 TGAAAAGCATACCTCCTCTCTTTTTCTCATTTTGAATTTCCCACTTGCGTACTGGTTTGGATGTAGTAATCTGTATAAGCGCAAGTTTTCCGTCTGATGTCCCAAACAAAAGGTCTTCTCCAGAGTCACCTA chr4 - 94230402 38769237 38769236 38769368 55461035 55461034 55461166 132 TGAGACACACACCTCCTCTCTTCTTTTCATTTTCAATTTCCCACTTAGGTACAGAAGCAGAACCAGTAATCTGGATAAGACCCAGTTTGCCATCAGAAGTTCCATACACAATTTCTTCTCCAGAATCACCTA ...:.x:..:............:..:.......x............:x....x.:xx::..xx:.........x.....xx.x.....x..:..x..x..:...x...x..xx...........:....... 132M 100/132 75.8% 132/94230402 0.0% 0/132 0.0% 83085455 NA +5293 chr4 + 190214555 121855473 121855472 121855582 110 ATAAAATCCTGATTACCGCCATTTCCATTGTGTAGTGCTAAGACAGTAGGGGGTCCAGGAACTTCAACTGCATACATCACATCAGATCCCTG-----AAGGAGAAGTATTTAAAA chr4 - 94230402 38770731 38770730 38770844 55459559 55459558 55459672 114 ACAAAATTCTG-TTACCTCCATCTCCATTGTTTAGAGCAAGAACAGTAGGTGGTCCAGGAACTTCTACTTCATAAAGTAGATCTGATCCCTGGGGACAAAGAGAACTACCTTGAA .:.....:...-.....x....:........x...x..x.::........x..............x...x....x.x:.x...x........-----..:.....x..::.x:.. 11M1D80M5I18M 86/109 78.9% 114/94230402 0.0% 6/109 5.5% 83084742 NA +3369 chr4 + 190214555 121855810 121855809 121855896 87 ACACACATGTATACATATATACACATATGTATACATATATGCACATGTATGTGTATATATGTATATGTACATATATGTACATACATG chr4 - 94230402 64944126 64944125 64944212 29286191 29286190 29286277 87 ATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG .:.x.:.:.....x...x.....x.........:..x.:..x:xx.....x.x.x...x........:x:x.:::....::..:... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 56911684 NA +3159 chr4 + 190214555 121855865 121855864 121855920 56 TATATGTATATGTACATATATGTACATACATGTATGTGTATATATGTATATATGTG chr4 - 94230402 65232559 65232558 65232614 28997789 28997788 28997844 56 TATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTG .....:....::.......xx::xx.................x.x....:...... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 56623306 NA +3086 chr4 + 190214555 121855882 121855881 121855959 78 ATATGTACATACATGTATGTGTATATATGTATATATGTGTACATGTACATGTGTATATGTATATGTACATATATATGT chr4 - 94230402 81401293 81401292 81401370 12829033 12829032 12829110 78 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGT ....x.x::.::x...:.x.:x.x....:..:...x.x.........x:.....:.:.:..x....x.....:x.... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 40454589 NA +11848 chr4 + 190214555 121858974 121858973 121859195 222 AATACAAATAACAG----------CAACCTGTAAAACTCTGAGCACTCTGTCCTGGCAGGCCAATACAGGTGTGATACGAGATAATCTTTCCACTGGAAGGCAGATCACATCATTGATTTTATCCCCAGAAAGGTAATAATGTTGGTCTTTGCAGTCACAATAATGGTTATAGATGTAACTTGCACTGAGAAAGAGGTCTGAGCCAGATATGTGCCTGAGAACATTAAAATA chr4 - 94230402 38771372 38771371 38771603 55458800 55458799 55459031 232 AATACATAAAACAAGCAAATATTTTAACCTGTAAAACTCTGAGGACTCTATCCTGACACGCAAGTACCGGGGTAATGCAATTCACTTTATCTACAGGAAGGCAGAGAACATCATTGATTTTATCTCTTGACAGGTAGTAGTGTTTGTCTTTGCAGTCGCAGTAGTGGTTATAGATATAGCTTGCACAAAGAAAGAGATCAGCTCCTGAAATGTGCCTGAGAAAAAGAAAACA ......x.x....:----------:..................x.....:.....:..x..x.:...x..x..:..:.:.xx:.x.:.x..:..x..........xx.................:.:x..x.....:..:....x............:..:..:...........:..:.......x:........:..x.xx..x..x.............x.xx....:. 14M10I208M 173/222 77.9% 232/94230402 0.0% 10/222 4.5% 83087602 NA +11875 chr4 + 190214555 121861498 121861497 121861689 192 ACATACATAGCTTTAATGCTTTCAGTGAGGTTTGTTTCAAAGGAGAGGAACTGTTTTCCTCTTTTTGTGAAGCCTCTAATCTCAGATGCTGCAGCAATAAAAATTTTCTCCTGAGGTGTGTTGATAACCCCTCCCAGTTCCAGCCTTGCAATCTTCGGCCCGGGTAAAGTCTTGAACACTGCCTGAAAAAAA chr4 - 94230402 38772037 38772036 38772228 55458175 55458174 55458366 192 ACACACATAGCTTTGATGTCTTCGGTGAGGTTAGTTTCAAAGGAGAGGAACTGCTTCCCTCTTTTCGTGAAACCTCTGACTTCCGATCCCGTCGCCACAAAAACTTTCTCTTGGGGTGTATTAAGAGCTCCTCCCAGCTCCAGGCGTGCGATTTTGGGGCCGGGCAGTGTTTTGAACACTGTCTGTAAAGAA ...:..........:...::...:........x....................:..:........:.....:.....:.::..x...x.:.:x..x.:.....:......:..:.....:..:.x.:.:........:.....x.x...:..:..x..x.....:.:x..:..........:...x...:.. 192M 150/192 78.1% 192/94230402 0.0% 0/192 0.0% 83089461 NA +3759 chr4 + 190214555 121867977 121867976 121868057 81 GTACCTTTTGTGTAGCTCTGTGTCTTGAGGCAGGAATTAGCTTCATAGTCTTCTGAGATGTTACTCCCACCTAAAGAAAAA chr4 - 94230402 38772637 38772636 38772717 55457686 55457685 55457766 81 GTACCTTCTGAGTGGCCCTGCGGCCCGACGCGGGGAGCAGCCTCATGGTCTTCTGCGCCGTGACGCCCACCTGCCGAGGAA .......:..x..:..:...:.x.::..x..:..:.x:...:....:........x.x:..x..x.......:xx..::.. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 83095340 NA +3090 chr4 + 190214555 121868672 121868671 121868740 69 AAGACCCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGATTTATGCTAAA-ATACCAAA chr4 - 94230402 18805882 18805881 18805951 75424452 75424451 75424521 70 AATACTCTATTTAAGAAACAGAAAAAAAGAAACTTAAAAAAAAAAAAAAGTGTATGCTAAGCATATTAAA ..x..:..:...x.:...x.:.......:...xxx..........:..::.x........:-...::... 61M1I8M 51/69 73.9% 70/94230402 0.0% 1/69 1.4% 103062790 87151765 +3013 chr4 + 190214555 121868679 121868678 121868733 55 TGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGATTTATGCTAAAA chr4 - 94230402 38550288 38550287 38550342 55680061 55680060 55680115 55 TGTTGCAAAAAAAAAAAAAAAAAAGAGGGAATAGAAAAGTAGATGTGAATTAAAA ....x...................:.:::..x.:.....x....x.:x::..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 83318391 NA +16041 chr4 + 190214555 121879551 121879550 121879910 360 CAGACAAATAAAATG----------CATTTTCATGTGATAAAACAATAAAACCATTAAGAGCTAACTTTTAAAGGTTCACATGATAAAGGTAGTTAATACTAAAAATTTACATCATAGTTTTTCAAGTATTTCATACTTAGAAATATTATTGCCCACA----TTTGTGCTATAGTCAAAGCCAAATCCAGGTTGCTGCATCATTCACATCTCAGCATGCTGGGATTCAGTTTCTCACTAAGTTTATGAATTAGAATGGCTAATTCCTCAGTTGCTTGGCTCTTGTCTTCCAAAAGTTCATAACGAAGGCTGGAGATATCTTGCTTGATTTCTTTTAATTCACCTATAGTATTGATATTAAAAAA---TTATTGGTAA chr4 - 94230402 38773671 38773670 38774042 55456361 55456360 55456732 372 CAGATGATTAAGATGAAGACAACAACATTTT--GGTGACGAGTTAATAAAATTTCCTATGACTAAATTCCAGAGAAGCTGTACATAAAGTTATTTAGTGCTAAAAATCTACAATACA-TTTTTCAAGTATGAGATACT--GAAATATTATTGCCAATAAATAGTTGTGCTGTAGTCGAAGCCACGGTTCCTTTGTTGCATCATTCACATCTCAACATATTGGGATTGAGTTTCTCGCTGAGTTTATGTATTAAAATGGCTAACTCTTCTGTCGCCTGGGACTTGTCCTCCAAAAGTTCATAGCGAAGACTGGAGATATCTTGTTTGATTTCCTTTAATTCACCTGTATTAACCATGGAAAGAAATGCTTATTAGCAA ....::.x...:...----------......--x....::.:x:.......::x::x.x::....x..::.:..:xx.xxxxx......x..x...:.:........:....x:.:.-............xxx.....--..............x.:.----x.......:.....:......x:x::xxx...:..................:...::.......x........:..:........x....:.........:..:..x..:..:...xx......:..............:.....:..............:........:............:..x..x:x..:xx..:...---.....:.:.. 15M10I6M2D84M1D20M2D18M4I202M3I10M 268/355 75.5% 372/94230402 0.0% 22/355 6.2% 83105880 NA +6945 chr4 + 190214555 121882349 121882348 121882454 106 CTTACCTTCATTAACTTCATCATTTTCTTTGTCTACTTGTGCTTTCAAAACATACCGCTTTATAAGTCTTTTCATTATCTGCTGTTGGGCAAAAGTAA----ATGATTAG chr4 - 94230402 38775426 38775425 38775535 55454868 55454867 55454977 110 CTTACCTTCATTTACTTCATCATTTTCTTTGTCCACTTGTGCTTTCAGAACGTAACGTTTTATCAGTCTTTTCATTATTTGCTGTCAGATTAAAACAGTGACATGGTTAG ............x....................:.............:...:..x..:.....x..............:......::.::x...::.:----...:.... 98M4I8M 89/106 84.0% 110/94230402 0.0% 4/106 3.8% 83106923 NA +3442 chr4 + 190214555 121897443 121897442 121897500 58 ATCTCAACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCAATT chr4 - 94230402 1220213 1220212 1220270 93010133 93010132 93010190 58 ATCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAAGTCCCAGTT .......x:...............x....x....x...:...x.:.:..:.:...:.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 120677230 69537325 +8227 chr4 + 190214555 121899605 121899604 121899708 104 TGCTTACCTGATAACGTGTTGGCTGATTGAGAATGCTGTTAAAACTGTGTGATTCAAAAACTCTTGAGTTAGACTGAGTGAAGAGGTTTAACTAGGAAAAAATA chr4 - 94230402 38778029 38778028 38778132 55452271 55452270 55452374 104 TACCTACCTGATAGCGTGTTGGCTGATTGAGAATGCTGTTAAAACTGTGTGATTCAAAAACTCGGGAGTTCGACTGAGTGAAAAGGTTTAACTAGGAAGCAACA .:.:.........:.................................................xx.....x...........:...............:x..:. 104M 94/104 90.4% 104/94230402 0.0% 0/104 0.0% 83121576 NA +16745 chr4 + 190214555 121902835 121902834 121903100 266 AAGTTTTCGATACCTACCCTGGACTTTGAGTTACCCATTCCCATTTCTATATCCTTCTGAAGCCTTCTCCTTCTGCATTTGGGAAAGTTAACAATTCGCATGATGAAATAAACAAATGATTTTGGACTAGGAACTAGACTGAAAGGTGGAGGTAATGTTTTTCCATCATCAAAATAGGATAACCAAAGTTTTGAACGAGCAAACTTCCATTCTACATCACTGTCATCCTGTGT-----CACAAAAA-------------------TAGAAA---AAAAAACTAATTTTAAATG chr4 - 94230402 38780246 38780245 38780538 55449865 55449864 55450157 293 AAGATTTCAGCACCTACCCTCGATTTGGAATTGCCCATTCCCATTTCAATGTCCTTCTGCAGCCGTCTCCTCCTGCACTTAGAAAAGTTAATGATCCTCATGATGAAATAGAAAAACGATTTGGGACTTGGTACAAGACTAAATGGTGGAGGTAATGTTTTTCCATCATCAAAATACGATAACCAAAGTTTAGAACGAGCAAACTTCCACTCCACATCACTGTCATCCTGTGTTAAGACATAAAAACGGGTATATACTTCATTTCTAGAAATGTAAAAAACTTACTCCAAATG ...x....:::.........x..:..x..:..:..............x..:........x....x......:.....:..:.:........::..:.x............:.x...:.....x.....x..x..x.....:..x................................x..............x.................:..:....................-----..:.....-------------------......---........x.:.::..... 233M5I8M19I6M3I19M 227/266 85.3% 293/94230402 0.0% 27/266 10.2% 83122589 NA +14739 chr4 + 190214555 121904307 121904306 121904579 273 AGAAAACCGATTTACCTCAATTTCTTGATATGAGCTATTAATCATAGCAATTAGCATGTTGAGTAAAACGACCACCATAGTTACATTGTATATTCCATAAAGAACGTATCCAATATTTTCTATGAATTTGTGATCATATTTGAGCACAACGGAAGTCACTTCAGACAACCCAAATATTGACCAAAATAAAGTCTTGAAACTTTCTTCTACACTG---------TTGAAAAAATAAGATACAAAGTAAGTAAGTTAACAGTTTTCAATATCTAAGAGTGAAAA chr4 - 94230402 38782438 38782437 38782719 55447684 55447683 55447965 282 AGAACAGAGCCCTACCTCGATTTCTTGATATGAGCTGTTGATCATAGCAATCAGCATGTTGAGCAGAACTACCACCATCGTGACATTGTATATGCCATAGAGAACATATCCAATGTTCTCAATGAACTTATGATCGTATTTCAGGACAACAGAGGTTACTTCAGACAAGCCAAATATTGACCAAAATAAGGTTTTGAAGCTTTCTTCAACTCTGAGGAAGTGAGAGaaaaaaaaaaaaaaagaaaaaaaaaagaaGCCATTATTACTAACCAGGCAAGAAAA ....x.xx.x::......:.................:..:...........:...........:.:...x........x..x...........x.....:.....:........:..:..x.....:..:.....:.....x..x.....:..:..:...........x....................:..:.....:........x..x...---------xx.......x..:.x.x.:.:x..:x..:xx.:.x:..x.:.x..x.:.:.x:x..... 214M9I59M 212/273 77.7% 282/94230402 0.0% 9/273 3.3% 83121869 NA +20833 chr4 + 190214555 121907296 121907295 121907758 463 TACTTACGTGGTAAAAGCAGCATTAACTTTAGCCCCAAGGTAGTAAGAATAAAGTATGAACATGCCAATCATAAAGGCAAAAAACACCATAATAAAGAGGACCATGAACTTGAATATGTCCTTTACAGTCCTTCCAAGAGAGATCTGCAGGGGGCCAAAGCTCTCATTTGCAGGGAGGATGTACGCAATCCGAGAGAAGCTGAGCACAACAGCTATGGCATAAAGGCCTTCAGATATAATCTGAGGGTCAGAAGGGAGCCATTTATCTCTAGCTAGAAAAAAGAGAGAAAGAGATTAAAAATGGAGCTTTCTATTCATTGCCAACTACGCAAAGCAAATACCTTAAATAGGATCTATCTTGTAGGTAGGTGGTTACCATCTCAGTTGAAACTAATCTAGATTTAATT-----AACTGTCCAGGGA--CTATTTTCATCT----TAAACCAGAA-------ACGTAAATTCTATATTACTTT chr4 - 94230402 38784767 38784766 38785216 55445187 55445186 55445636 450 TACTTACGTTGTAAAGGCTGGGTTTAGCTTAGCTCCAAGGTAGTAGGAATACAGTATGAACATTCCAATCATGAATGCAAGAAATACCATAATAAAAAGGACCATAAACTTGAAGATGTCTTTAACAGTCCTTCCAAGAGAAATCTGCAAGGGTCCAAAACTCTCATTCGCAGGCAGGATATATGCAATCCGAGAAAAGCTAAGAACAACAGCAATTGCATAAAGGCCTTCAGATATTATCTGAGGATCAGATGGAAGCCATTTATCTCTAGCTGGAAGATAAAAAATAGGGGGATAAATATGAAG--TGTCACTCATTTATCACTATGGTGAAAAATAAATCTTGGTAAGATTTGCCATG---------------------------AACATGTCTGAATTTAGTTAAAGCAAATATTTGGGGAGTCTATTCCTATTTCCTGTAAGTCACAAATGATGGATGTAAAT--TACATTACTTT .........x.....:..x.x:..x.x:.....:...........:.....x...........x........:..x....:...:...........:........:........x.....:..x.................:.......:...x.....:........:.....x.....:..:...........:.....:..x........x..x....................x........:.....x..:..................:...:.x.:.:.:x.:.:.:x....x...:..--.x::.:.....xx:x....:.xx:.:x..xx.x::.x::..:...:.::.x..---------------------------...xx:...::.....:..-----..x.:.:::....--.....:::..:.----...::..x..-------.:......--..:........ 306M2D53M27D19M5I13M2I12M4I10M7I8M2D11M 334/432 77.3% 450/94230402 0.0% 49/432 11.3% 83122529 NA +4182 chr4 + 190214555 121907336 121907335 121907564 229 TAGTAAGAATAAAGTATGAACATGCCAATCATAAAGGCAAAAAACACCATAATAAAGAGGACCATGAACTTGAATATGTCCTTTACAGTCCTTCCAAGAGAGATCTGCAGGGGGCCAAAGCTCTCATTTGCAGGGAGGATGTACGCAATCCGAGAGAAGCTGAGCACAACAGCTATGGCATAAAGGCCTTCAGATATAATCTGAGGGTCAGAAGGGAGCCATTTATCTC chr4 - 94230402 81014758 81014757 81014977 13215426 13215425 13215645 220 TAATAAAAATAAAGCTGGTTCAGTCCATTGGCAAAAGCCAGAAGCACCAGACAGTAGATAAAAAGGAATTTAAGGATGTCTAGCAGCATGCGTCCCAGAGAAATCTGCAGGGGTCCCAGGTGTGAATTTGCTGTAAACAGGGATATGAGACGCAAGGAACTTAAAATGTTGGATATTGCAAAGAGGGCTTCTGCAA-----TGAGAGTC----GGGTGCCACATTTCCC ..:...:.......:xx.xx..xx...x.x::...:..x.:..:.....x.xx:x...x:.xx.x...:..:.:x.....:xx:.xx:.x.x...x.....:...........x..x.:.:x:xx......x.x:.:x.x.x.::::.xx..x:..:.:..x.:x.::x::.x...x...x.:...x....x.xx.-----....:...----...x....:x.x..:. 196M5D8M4D16M 131/220 59.5% 220/94230402 0.0% 9/220 4.1% 40892578 NA +17111 chr4 + 190214555 121910147 121910146 121910406 260 AACTTACCATAAGTGAAATACTGTATCTCTGGTGGGAGTGTCACTTCACTGAGGTCACTCTCTTGGACGTAACTGTCCACATACTGTTGTGCCTTCGTTGCCTGAAGGAAAGCTAGGAATCTGGCTGTGAAAGCAGCAATGAAGATGGACAGCATCCCAAAGTCAAGCACATTCCACAACTGCAAAATGTATTCCCTAGGTCCTTCCAGCCAGAGCTCTTTACATTCAGACCACATCATTCCTGTCACAACAAATACAGA chr4 - 94230402 38786404 38786403 38786663 55443740 55443739 55443999 260 AACTCACCATAGGTAAAATATTCTATTTCTGGAGGAAGCGTGACCTCAGAGAGGTCACTCTCTTCAATGTAGTTGTCCACATACTGTTGTGCTTTTGTGGCCTGCAGGAATGCTAGAAGCCTCGCTGTGAAAGCTGCAATGAAAATGGACAACATCCCAAAATCCAAAACATTCCATAACTGCAAAATATATTCCCTGGGTCCTTCCAGCCACAGCTCTTTGCATTCTGACCACATCATACCTGCAACAAGAAATGTAAA ....:......:..:.....:.x...:.....x..:..:..x..:...xx..............x:.:...::...................:..:..x.....x.....x.....:.::..x...........x........:.......:.........:..x.:x........:...........:........:..............x........:.....x...........x....:x....x....::.:. 260M 213/260 81.9% 260/94230402 0.0% 0/260 0.0% 83123743 NA +15141 chr4 + 190214555 121911866 121911865 121912118 253 AAAAGACTTACCAAGAACCCAGACCATAATTAGCATTTCAGTCCATGTAAACTGGGTGGTTTTCACCCTGAAGATCTGTTTGGGATAGTCAGTAACTGTGATATTGGGCAGCGTGGTGATGCCTTCGAACCTGTCTGAGGCATTGAACACAAGCAGACCCAGGAAGATGATGAAAGAAGCTGCATGTGCTACAAACTTCATAAAAGGGCTTCGCAGAATTTTCCCCAGCTGTAACAAACCAAAGAGGAAAAGT chr4 - 94230402 38787678 38787677 38787929 55442474 55442473 55442725 252 AATATACCTACCAAGTACCCATACCATGATCAGCATTTCTGTCCAGGTGAACTGGGTAGTCTTCACCCTAAAGATCTGCTTAGGGTAATCGGTAACAGTGACATTCGGTAGCGTTGTTATACCTTCAAATCTGTCAGAAGCATTAAACACCAGCAGGCCTAGGAAAATGATGAAGGATGCTGCATGTGCCACAAATTTCATAAATGGGCTTTGAAGAATTCTTCCAAGCTGCAA-AGACAAAATGAAAGCAGT ..x.x..:.......x.....x.....:..:........x.....x..:........:..:........:........:..:..:..:..:.....x....:...x..:.....x..x..:.....:..:.....x..:.....:.....x.....:..:.....:........:..x...........:.....:........x......:.x......:.:..x.....:..-.:..x...x:::.:x... 234M1D18M 199/252 79.0% 252/94230402 0.0% 1/252 0.4% 83124188 NA +12845 chr4 + 190214555 121914742 121914741 121914960 219 ACACCACCACAGAGGAAA-----TAGATGTAGAAAGCAAGTACCCTGCTGCAAGGTGCGATCCAGTAGCCAATGGCCAGGAATGGAAGGCCCAGGGCCACGACCAGCACAACGAGACACTTGATAGCTATGGTCTGCTCCCTTAGGCCTGAGAGGTTCTCATACCAGATCGTCAAGAGCTGCTGCTGGCAGTTGGGATGAGCCACAAACTATTGGGAGAGAGAG chr4 - 94230402 38790293 38790292 38790516 55439887 55439886 55440110 224 ACACCAGAACAGTGCAAGATTTGTAATTTTTAAAAGTCAGTACCCTGCTACACGGCGCAATCCAATAACCGATGGCTAGAAATGGAAGGCCCAACGCCACAACCAGCACAACCAGACACTTGATGGCTATGGTTTGCTCCCGCAGTCCTGAGAGATTTTCATACCAGATAGTCAGTAGCTGTTGCTGACAGTTTGGATGAGCCACAAACTGCAAAGAAAACAAG ......xx....x.x..:-----..:x.x.x:....:x...........:..x..:..:.....:..:..:.....:..:.............:x.....:...........x...........:........:.......x:..x........:..:...........x....:x.....:.....:.....x................::x::..:.:x:.. 18M5I201M 172/219 78.5% 224/94230402 0.0% 5/219 2.3% 83124449 NA +3799 chr4 + 190214555 121914780 121914779 121914961 182 CCTGCTGCAAGGTGCGATCCAGTAGCCAATGG------CCAGGAATGGAAGGCCCAGGGCCACGACCAGCACAACGAGACACTTGATAGCTATGGTCTGCTCCCTTAGGCCTGAGAGGTTCTCATACCAGATCGTCAAGAGCTGCTGCTGGCAGTTGGGATGAGCCACAAACTATTGGGAGAGAGAGA chr4 - 94230402 81022085 81022084 81022266 13208137 13208136 13208318 182 CCTGCTCTTCGGTGCAATCAGGTATGCCACAGATAGCACAGGGAATAGCAGTCCGATGGTGACA-----CAGGTCAAGAGTTTTACTGCCCAGTGTTTCCGCCTCCAG-CCTGGAAAACCGTCATACCAAAGCGTTGCTAGTAGCTGCTGGCAGTTTGGCTGAGCAACAAACTGAGGAGGAAGAAAAA ......x:xx.....:...x:...xx.x.::.------.x:.....:.x..x..x.x..:x..:-----..x:x.:...xx:..:x.:x.:.xx..:.x.x..:::..-....::.::::x........:.x...::xx..:x.............x..x.....x.......:xx.:.::...:.:. 32M6I26M5D39M1D79M 108/176 61.4% 182/94230402 0.0% 12/176 6.8% 40892695 NA +3576 chr4 + 190214555 121924615 121924614 121924698 84 CTGCAGCTTCAAATCTCCTGGGCTCAAGTGATCTTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCACGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCC-CAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:....:-....x..:.....:.......x.::x.xx.x........::::................--.::.::....::.. 8M1D59M2D14M 59/81 72.8% 81/94230402 0.0% 3/81 3.7% 103727489 86487066 +12311 chr4 + 190214555 121924986 121924985 121925225 240 ATATGGCACTAGATGAAAGTAGGCCCACTCACCTTTTTGACTTCATACTTAATGGCAAGTTTGACACGACTTAATGAAGCTTTGTGCCTGTGTACCTCCAGAGGCTCTGCTGATTCCAGATCTCCATTCAGAATGGCTTCTACCTCTTCTGAGTCTCGGCAGAGATCCAGCACACCCACTACAAAGTCTTTGCATTGCATGGAGAGCTTCCGATAGTCATTCTAAGAACAAGAGGTTTAG chr4 - 94230402 38795448 38795447 38795677 55434726 55434725 55434955 230 ATATTACATCATCTGAAAG------CTCTTACCTTTTTGACTTCATACTTAATGGCCAGCTTCACACGGCTCAGTGATGCTCTGTGTCTCTGCGTTTCAACCGGCTCTG---AATTCAAATCCCCATTAAGGATGGCCTCCACTTCTTCCGAGTCTCGGCAGAGATCAAGAACTCCAACCACAAAATCTTTGCATTGCATAGACAGCTTGCGATAGTCATTCTGC-AACAGAAGGGTTAG ....x:..::.xx......------.x..:..........................x..:..x.....:..:.:...x...:....:..x..::::..x.xx.......---.x.:..:...:.....x..:.....:..:..:.....:.................x..x..x..x..:.....:..............:..x.....x.............:x-....::...x.... 19M6D84M3D113M1D14M 181/230 78.7% 230/94230402 0.0% 10/230 4.3% 83129538 NA +3040 chr4 + 190214555 121930818 121930817 121930881 64 TGCTCTGAGATCTAAAAAAAAAAAAAAAAAAAAAAACATTTTGGGTCCAAGTAAATAAATCTTT chr4 - 94230402 1370621 1370620 1370681 92859722 92859721 92859782 61 TGCTTTGAGTTCTTAAGAAAAAAAAAAAAAAGAAAGCATTCTGGTTTAGAG---ATTAAGCTTT ....:....x...x..:..............:...:....:...x.:x:..---..x..x.... 51M3D10M 48/61 78.7% 61/94230402 0.0% 3/61 4.9% 120560197 69654358 +48422 chr4 + 190214555 121932267 121932266 121933081 815 TTACCTTGAACTCCTTCTCTATGTTGGCCAGCTTGGCCAGCTCGTTGCTGAGCTCTAGGGCCGTAAGCACCGGGTCCTCGCTGGACAATGAGAGGTAAGCCGGGCTGGCCAGCCCCTTGTAGGCATTGATCCTCGAGCGTGAGTGGCTGAAGGAGTCGTGCCTCTGCTTCTCCATGCAGTCCCCGCACTTGCAGAAATAGTCGTGCGGCCGCTCGATCCTGGCACCCTTCATCAGCAGCATGTGCACCACTTCGTATTTCTGGCAGTGCGCCGCCAGGATGATGGGGGTGATGTCCGGCGAGAAGCGCGTGCCGTCCTCGTCGTAAGCGTAGAAGTCGTCGTCCTGCAGCTCCTGCTCACAGGGGCTCAGAGTGAGACGCTTGCTGGCCGCGAAGCCAGGGTGGTTGAGGATGGCCTCTACGATGCGCACGTAGCCCTTGCTGATGGCGAGCAGCAGGGCGTCGCCAATGCGCGCCAGGTTCTCCTTCTTGAGCAGCAGCTCGGTCACCTCCAGGTGCTCGTTGCCCACAGCCAGCTGCAGCGCGTTCTGGCCCATGTAGTCCACGCAGTTGACGTTCAGCGTCTTGGACTCCTCCAGCATCTTGCGCACCACTGGGATGTTGCCGTACTCGGCGGCGTCGAGGAAGCGCTCCTCCTCGGCGGTGAGGCTGGTGCCGCGGTCATTGAACATGAAGGCCGGGCCCCTGACAGCCTGGCGCCGGCCCTTCTCCCGCATCACTGTCATGCGTCTCAGGGATGGGCTTCCCTCCATGGACCTAATCAGTAGCAACGATAAAACAACTGTAGAATATTAG chr4 - 94230402 38803539 38803538 38804352 55426051 55426050 55426864 814 TTACCTTGAATTCTTTTTCAATGTTAGCCAATTTGGCAAGCTCATTGCTGAGTTCCAGAGCAGTGAGCACAGGATCTTCACTGGAGAGGGACAGGTAAGCTGGACTGGCCAGTCCTTTGTAGGCATTTATTCTTGACCGAGAGTGACTGAAAGAATCATGCTTTTGCTTCTCTGTACAGTCATTACATTTGCAGAAATAATCATGAGGCCTTTCTATCCTTGCTCCTTTCATCAACAGCATATGCACGACTTCGTATTTTTGGCAGTGAGCAGCTAAAATGATGGGAGTGATGTCTGGAGAAAAGCGGGTGCCGTCTTCGTCATAGGAATAAAAATCGTCATCCTGGAGCTCCTGCTCACAAGGGCTCAGAGTCAGTCGCTTATTTACTGAAAACCCAGGATGATTTAAAATTGCTTCCACTATCCTAATGTAGCCCTTGCTGATTGCGAGCAGCAGGGCATCTCCAATCCGTGCCAAGTTCTCTTTTTTTAACAGAAGTTCTGTCACTTCCAAATGTTCGTTCCCTACAGCAAGCTGCAAGGCGTTTTGGCCCATGTAGTCAACACAGTTGACATTCAGTGTTTTTGACTCCTCCAGCATTTTGCGCACCACAGGTATGTTCCCATACTCTGCTGCATCTAGGAAGCGCTCTTCCTCAGCAGTCAGACTAGTGCCTCTGTTGTTGAACATGAATGCTGGGCCTCTAATGGCCTGGCGCCTTCCCTTTTCCCTCATCATAGTCATACGCCTCAGAGACGGACTTTCTTCAATGTACCTAATGGGGAG-AAAAATAAAAAAGTAACAAAATTTCAG ..........:..:..:..x.....:....::.....x.....:........:..:..:..x..:.....x..:..:..:.....x.:x..x........:..:........:..:...........x..:..:..x..x.....:.....:..:..:...:.:........::.:.....x:::..:...........:..:..x....x:..x.....x..x..:.......:......:.....x...........:........x..x..:.::........:........:..x..:.....x........:.....:..:.x:..:..:.....:.....x..............:...........x..x.....::.x:.:.x:..x.....:..:..x.::..x..:..:..x..x.xx.:...............x..............:..x.....x..:....:......:..:..x.:...x..:..x.....:....::..:.....x..:.....x.......:x.....:..............x..:........:.....:..:..x..............:...........x..x.....x..:.....x..x..:..x...........:.....:..:..x..:..:.....x.x..::...........x..:.....:..:.::..........xx.....:....x.....:x.....:..:.....:..:..:...:.:..x...x.......x:.x..-..x:......x.::x::.:...x.:.. 787M1D27M 630/814 77.4% 814/94230402 0.0% 1/814 0.1% 83128728 NA +3175 chr4 + 190214555 121948836 121948835 121948880 45 TGCGGTTTTTTTTTTGTTTTTTTGTTTTTGTTGTTGTTGTTTTTT chr4 - 94230402 67965655 67965654 67965699 26264704 26264703 26264748 45 TGGGTTTTTTTGCTTGTTTTTCTGTTTTTGTTGTTGTTGTCTTTT ..x.x......x:........:..................:.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 53983181 NA +12145 chr4 + 190214555 121951374 121951373 121952105 732 GGCTCGACGTGGAG----CCGCCCGGCGCGC----GCCT--TCCCGCCCCCCGCCCGGCACCGCCCTCCGAGGCGCGGGCCGCGGCCGGGCCCGGTACTCACAGGTCCGGCCCGTGGGAGAAGGGCGGCGGGCAGTAGCCGTGCGGCTCCCGC---------------TGCGAGGGCGCCGAGCGCGGCTCCAGCCCCCCGTTGACGCCCCTCCAGCCCCGGCGGCGGCGCTGCGGCTCCGCGCCCTCGTCCTCGCCCTCGTCTTCCTCCTCCTCCGGCGCC---------------------------GGGAAGGTCACCCTTGCTTGTTCTTTGCACTTCCTGACCTTGGTGGACATCG-------------CGCCGGCTGCGGTCCGAGTGTGGGGGTGCCGGCTGCCGGCCTCCTCCGCCTTCGC------------------------------------GGCAGTGCAGTC---------------------------------------------TTCCCGCGGCGCCCCTTCACCACCTCCCGCGGCTTCCGGGGCCCCGGGCGGCCCAGGGCGGGAAGGCAGGAG-CGGAGAGCGTCGCGGCCCGCGATCCAGCAGTTAGAGGCTAGCGCCGAAGCCGAGCTGCCG---------CCGCCCACCATCAAACCGTGGGAGCAGCTGCCGCGGCCGTGGCTGCGACGAGGAAGCCCGGGGCCGAGCGGGGCTCTGGTGCTGGGAGAGGCTCTCCAGCCCCGCGGCGGCGGCGATGCCTCCTCGGCGCCCGTCTCCTGTCTCCGACAGCATCACTTGCTAG-GACAGCATCGTTACTCAGGGAGAAGGAGAGGGAGGGCGGGAGGGGGAAGAGGAGGGGGAGA chr4 - 94230402 38812043 38812042 38812879 55417524 55417523 55418360 837 GGCTCGACGGGGCGGAGACGGCCCGGCGTCCAGAGGCCGGGTACCGAggccggccccgcggccgccccggggAAGTTGGCGGCCCCCGGTCCCGACTTACATGGTGCTGGC-----GAAGGGCAGCGGCGGGTAGTAGCCGTAGGGCTCCCGGAGGGTCTTCACGGCGCGCAGGGGCGGCGGCGGGGGCTCCAGCCCACCGTTGACGCCTCTCCAGCCGCGGCGCCGGCGCTGCCGctcttcttcctctgcctcctcctcctcctcctcctcctgctgctgctgctgctgctgctgctgctgctgcGGGGGGAAGGTCACTCTCCCCTGTTCCTTGCTCTTCCGGCTCTTGCTGGACATGGTCGGGGTCTCCTCCGCCGGCGGCGGCC-------GCTGCTGCTCCCGGCCGGCCTCGTCGGGCAGCGCGCGCGGCGGAGAGGGAGGCGGGAGGAGGAGGAGGCGGGCAGCGCTGCCCGGCCGGGCACGGAGCGCCCGGAGGGAACGGCGGCCGCACCGCGATCCCCCCGCCGCCCCTCTACCCTCTCCGCCCGCCGCCTGTCAGCGAGGCGGCCC-------GACAGCGGGAGCCGGGGAGCGCCG------GCGAGCGGG------GAGGAGAGCG-AGAGACGGGGCTCCCGGCGGCGGCTCTGCCCCTCGCCTCTCCTTGTCATTATCCCTC---GCTAGGGCAGCATCGCGGCGGAGCGGAgcggggcggccgcctgccgccgcggg---------caccccgccgaggaggggccgcc------gctcccacctgccggcatcgggaccgcccccgcccggcggccgccTCG--GCTCAGGgggaagagaagggagggggggaaggaaaagaaaggccgggga .........x..x.----.x........:x.----...x--.x...xxx..x....x..:x.xx..:.x.:.:x.:x...x..xx....x....::x:x..::.xx.:...-----.:..::x:........:.........:x........x---------------:..::.....x..:xx.x...........x...........:........x.....x.........x....:x.x:....xx....x:....x..:..........x.x..xx.---------------------------...........:..:x.:.....:....x.....x.x:....x.......x.-------------.......x....:.-------.xx.x...:xx.x.........x..x.x.xx...------------------------------------.....:..x.:.---------------------------------------------.:...x..x.......::...x:....xx.x..:x..x.xxxx.x:........-------..x:..:....-...:.....:..------....x.x:.------....xx....-x..::.x.:...x...---------.:....x:.::.xxx..x..xx.x:.x.:x:.---..::x...x..:x..x..x:.xx...:..x.:....xxx:...x:..:.x.:.---------x:......x.x..x..x.x:...------..x...::..x.:.x.x:..:x.x.::.x.:xx.::.-.:.x..x...--:.......:....:::........x....:..::....:::.xx..:.. 14M4I13M4I4M2I70M5D37M15I114M27I52M13I14M7D34M36I12M45I54M7D11M1I12M6D9M6D10M1D16M9I32M3D53M9D23M6D37M1I10M2D49M 459/680 67.5% 837/94230402 0.0% 209/680 30.7% 83139331 NA +3229 chr4 + 190214555 121971466 121971465 121971521 56 AGAAATTCTTCTTTATGTAAATATATATACACATACACACACACACACACATGTGC chr4 - 94230402 64433209 64433208 64433264 29797139 29797138 29797194 56 AAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.....::...x.:....x......x.............:..:..::.::.:... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 57538257 NA +3096 chr4 + 190214555 121971473 121971472 121971571 99 CTTCTTTATGTAAATATATATACACATACACACACACACACACATGTGCATGCATACACGCACACACACACACATATATACCCACATGTATAAAGGAGA chr4 - 94230402 66904836 66904835 66904934 27325469 27325468 27325567 99 CTGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGA ..x..x.x.x:.x....:..:::...:.....:............:.x:.x.:x:.x::.:.:...xx..:..::..x.x.:.x..xx.x....x.... 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 55066637 NA +3060 chr4 + 190214555 121971514 121971513 121971572 59 ACATGTGCATGCATACACGCACACACACACACATATATACCCACATGTATAAAGGAGAT chr4 - 94230402 28470367 28470366 28470425 65759978 65759977 65760036 59 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAAGTAGAT ....:..:..:..:.x..::::.::..........:....:....x:.x.....x.... 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 93501147 NA +3108 chr4 + 190214555 121983498 121983497 121983567 70 AAACCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGAAGAATGGTCTTGGGACACA chr4 - 94230402 9885853 9885852 9885922 84344481 84344480 84344550 70 AATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCA ..x:....:x.:.....:...:..x........:......x..::x...x.:....x::..x...x::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 112097645 78116910 +3788 chr4 + 190214555 122042145 122042144 122042227 83 CTACAACCTCTATCTCCAGGGTTTAAGCAATTCTCATGCCTCAGCCTCTCTAGTAGCTGGGACTATAGGTGCATGCCACTTTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG .....:..:xx.x..:.x.....:...::x...x..x.x........:..x.........:....:.x.....--.....x.. 73M2D8M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 103845019 86369536 +3387 chr4 + 190214555 122070909 122070908 122071003 95 AAATGATAAATTTAAAACTATTTTAAATTTACAAGAGTAATCACAGGCAAGTTACTGAGTCTGTCTGAGCCTTAGCTTTC----CAGTTAAGATAAAAA chr4 - 94230402 68174094 68174093 68174188 26056215 26056214 26056309 95 AAATGAAAGGCATAGAATTGTTTTTCATTTACAAGAGTCATCACAGACAAGTTAT----TTTGTTCCAGCCATTTCTTACAAATCTGTTAAAAAAAAAA ......x.:::x..:..:.:....xx............x.......:.......:----.:...::x....x.xx...x.----.x.....:.x..... 55M4D21M4I15M 67/91 73.6% 95/94230402 0.0% 8/91 8.8% 53896815 NA +4971 chr4 + 190214555 122087644 122087643 122087841 198 CTCCTTAGGCAAACTGGCAGTCCCGGGA-------GGTCACCATATTGATGCTGAACTTAGTGCAGACATCCCATCGGCATAGTGTACTACAGCCCGGAATGCCTGGGTTCAGATGGTCCTC-TCTCTCAGCCTCCAGAATGGCTGGAACTACAGGTGTGTGCCACCTTACCCAGCAAGGCTCTTTCTATTGGACATTTCACACTT chr4 - 94230402 18197039 18197038 18197234 76033169 76033168 76033364 196 CTCCTCAGACAGCCTTGTGACCCCAAGCTCTCTGCAGTCACCATGCTGGGAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG--TATCA----TCCTTTCAT--GACATTACATACTT .....:..:..:x..x.::::...::.x-------:........::..:x:x::::.....x...x.....:xx.:.....x:...x.........::.::x:.........::..x.:.x.-xxx........::x:.:.:............--:...::....:x.:--:.x..----..:..::..--......x..:.... 28M7I87M1I31M2D14M2D5M4D9M2D14M 123/188 65.4% 196/94230402 0.0% 18/188 9.6% 103890605 86323950 +3127 chr4 + 190214555 122106423 122106422 122106487 65 CGTGTCTCA----GGAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAATAAATAAAGCAAAGAAACTA chr4 - 94230402 91846549 91846548 91846617 2383786 2383785 2383854 69 CGTGCCCCACAAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGTCAAGTAAACTA ....:.:..----.....::.............:x.:.........:..:..:xx.:x...:x...... 9M4I56M 49/65 75.4% 69/94230402 0.0% 4/65 6.2% 30259874 NA +3005 chr4 + 190214555 122123475 122123474 122123534 60 TTTGTCTGTTGGCTTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTTTTT chr4 - 94230402 90321900 90321899 90321959 3908444 3908443 3908503 60 TCTATTTGTAAGCTTTTCTATTTTTTTTCCCTTCTTTTATTGCTTTTCCTCTGTTCTTTT .:.:.:...x:........x.:...:..:.:......:x..x......:.:.x..:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 31801575 NA +3165 chr4 + 190214555 122123494 122123493 122123562 69 TTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTGTACGTAACTCATAGTT chr4 - 94230402 25291594 25291593 25291662 68938741 68938740 68938809 69 TTCATTGTTTCTGTTTTTCGGTTTCTTTTTTTTCTGTTTCTTTTTTTCTGTTGTATGAAATTCCTCATT ...x..x.....x.:....xx..::...:......x...:.......:.x.....:.x..:..x.x:.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 96831900 93382655 +3066 chr4 + 190214555 122137383 122137382 122137445 63 GATTGATTTCTTTTTTTCTTTTTCTTTTTCTTTTCTTTTTTATTTCTTTTTTTTTCTTTTTTT chr4 - 94230402 35030488 35030487 35030550 59199853 59199852 59199915 63 GGCTGGCTTTTTTTCCACTTTTTTTTTCTCTTTTCTTTTTTGTATCTCTTTATGCATTGTTTT .::..::..:....::x......:...:.............:.x...:...x.x:x..x.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 87106895 NA +3154 chr4 + 190214555 122137405 122137404 122137491 87 TCTTTTTCTTTTCTTTTTTATTTCTTTTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTGAGACAGTCTCACTTTGTTGCCCAGGCTG chr4 - 94230402 50552289 50552288 50552375 43678028 43678027 43678114 87 TCTTTTTCACTCCTTTGCCATCTGTGCATTTTTCTCTTTATTTCTTTTATTAATTTTTAACTGAGCTACAGTTTCTTGCCTTGGTTG ........x:.:....x::..:.x.x:x.......:...x........x..xx.....:.xxx..::x..x...x.....:x..:.. 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 71585116 NA +9697 chr4 + 190214555 122173019 122173018 122173159 141 TTTTTTCCTCCCAACAGCTACCATTTTGTCCTGTGGATGGATTATTTACCTCACATATTATAATTCCCGGAATGTTGGTCTTATTTTAACACTAGTTCTTAACAGATTATACAAGCATGGCTATATCCATATTGGTGAGTT chr4 - 94230402 38856354 38856353 38856494 55373909 55373908 55374049 141 TTTTAATCTTTCAACAGCGACAATATTGTCTTGTGGATGGATTATCTACCTAACTTATTATAATTCCCGGAACATTGGACTAATTTTAACACTGGTTCTTAACAGACTATATAAACATGGCTACATCCATATTGGTAAGTT ....xx:..::.......x..x..x.....:..............:.....x..x.................::....x..x...........:............:....:..:........:............:.... 141M 119/141 84.4% 141/94230402 0.0% 0/141 0.0% 83316665 NA +6777 chr4 + 190214555 122174560 122174559 122174716 157 CCTTCCTATAACAGGTTCCTTCTCTTTCTCTGTTCTTTCTGGAAAAGTCATGGTTCGTGAAATCTATTACATTACAGAAGACATGTCTATTAGGTAACAAAATTAAAAAATTGAAAAGGACCCA-TGTT---AAACATACTTTAAAAATATTGTTAAAATG chr4 - 94230402 38858248 38858247 38858399 55372004 55372003 55372155 152 CTCTTCCACATTAGGTTCCTTTTCGTTCTCTGTGCTGTCTGGAAAAGTCATGGTTCGCGAAATCTATTTCATCACAGAAGACATGTCTATCAGG---------TACAGATTTCCAAGGGAGTCATTGTTCTAAAGTATGTCTAAGTAATGTAATCAAAATG .::.:.:.:.x:.........:..x........x..x....................:..........x...:.................:...---------..x.:.x..xx..:...x:..-....---..::..:::.x.:x...:.x:.:...... 94M9D21M1I4M3I29M 113/148 76.4% 152/94230402 0.0% 13/148 8.8% 83316312 NA +5914 chr4 + 190214555 122175793 122175792 122175924 132 GAAATGAGTTAAGTAAATTGTTACTTAAATTCTAATTTTGTAATTTCCCTTTCTTAGGATTCAAGATGGATTCATCATTTTTCGGTGGTGGAAAATGTATAACCCAAAACAGAAGCAACATGGTGAGTTTTC chr4 - 94230402 38858934 38858933 38859063 55371340 55371339 55371469 130 GAAAGAATTTTGGATGATTAATCTCTTAATTCCTATTTTAT--TTACTTTAATTTAGAATCCAAGATGGATTTATCATATTTCGCTGGTGGAAAATGTACAACCCTAAACAGAAGCAGCATGGTAAGCATCC ....x:.x..x:.xx:...:x.x::.x.....:x.....:.--..x.::.xx:....:..:...........:.....x.....x..............:.....x...........:......:..:x.:. 41M2D89M 95/130 73.1% 130/94230402 0.0% 2/130 1.5% 83316859 NA +3024 chr4 + 190214555 122180011 122180010 122180057 47 TATACACGTGCATGTACACACACACACACACACATACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::.......:.....:.:...xx........:::............ 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 107215173 82999382 +3058 chr4 + 190214555 122182721 122182720 122182804 84 TATTTTTCCTCCATTCACATTCACTGCTCCCTTTCTCCTTTAATTGTAATTGTTTATATGCATCTGCTCTACCAAATCGATTCA chr4 - 94230402 69155651 69155650 69155734 25074669 25074668 25074752 84 TATTTTCCTTCCATATATATTAAGTGGGTTTTTTTTTTTTTTTTTGTAATTATTTCTATTCATCTCTTCTATGAATAAGATTTA ......:.:.....x:.:...x.x..xx:::...:.::...xx........:...x...x.....x:....:x..xxx....:. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 53027070 NA +11157 chr4 + 190214555 122186031 122186030 122186249 219 TTTAGATCCAAAGGCAGAAACCAGGTTATACATCACAGTCAATGACTTTGAATTTCATGTCTATAATCGCTCGGATCTTTATGGACGCCTTCAAGAGTTGTTTGGTTTGGAGCCAACAATAATTCCACCTAAGAAAGATGATGATAAAACACGGGAAATTGGAAGAACAAGAACCCAATCGAAAATTGAAAGGTTCAGTATCATACTTGAATTTTATTA chr4 - 94230402 38862605 38862604 38862819 55367584 55367583 55367798 215 TTTAGATCCAAAGGCAGAAACAAGACTGTATATTATGGTGAACGACTTTGAATTTCATGTGTACAACCGTTCTGAGCTTTATGGACAACTTCAAGAGCTATTTGGCTTGGATCCCACCATAATTCCAGCAAAGAAAGATGATGAAAAAGCACAAGTGAATGGAAGGCAGAGAACACATACCAATCTTGAAAGGTAAATTATTATTC----ATTTTGCTA .....................x..::.:..:..:.::..x..:.................x..:..:..:..x..x..........:x.........:.:.....:.....x..x..x.........x.x..............x...:...::.x:.x......:xx:.....x..xx.x..xx.........xx.x...:..x.----.....::.. 206M4D9M 165/215 76.7% 215/94230402 0.0% 4/215 1.9% 83323426 NA +6820 chr4 + 190214555 122187419 122187418 122187518 100 TTTTCTTGTTAGAGTTAAAGTAAAAACAGAATCCCAAGACCCCACATCTTCATGGAGATCACTTATTCCAGTCATAAAGGTCAATGTGAGCACAGTAAGT chr4 - 94230402 38863844 38863843 38863943 55366460 55366459 55366559 100 TTTTTTCCACAGTGTAAAAGTAAAAACAGAATCTCAAGACCCTTCTTCTTCATGGAGATCACTTATTCCTGTCATTAAAGTCAATGTGAGCACGGTAAGT ....:.:xx:..x..x.................:........:x.x.......................x.....x..:..............:...... 100M 85/100 85.0% 100/94230402 0.0% 0/100 0.0% 83323575 NA +14666 chr4 + 190214555 122187881 122187880 122188093 213 TTTTTTTTTTTTAGGGACGTTTGGCCTTTGGAAATCACTACCAGCCGCAAACTCTGTGCATCAACTTTGATGATGCTTTCTTAACTTATACTACAAAACCACCTTCAAGTCATCTTGACCAATTCATGCATATTGTGAAAGGAAAGCTTGAAAATGTTCGAGTCATGCTTGTTCCTAGTCCAAGATATGTTGGTCTTCAAAATGATGAGTAAG chr4 - 94230402 38864521 38864520 38864733 55365670 55365669 55365882 213 TCTTCTTCATTTAGGGTCGCTTGGCATTTGGGAATCATTATCAACCACAAACACTTTGCATTAACTTCGATGATGCTTTTTTGACATATACCACAAAGCCTCCTTCCAGCCACCTTGATCAGTTTATGCATATTGTGAAAGGAAAACTGGAGAATGTTAGAGTCATGCTGGTTCCAAGTCCAAGATATGTTGGTCTTCAAAATGATGAGTGAG .:..:..:x.......x..:.....x.....:.....:..:..:..:.....x..x.....:.....:...........:..:..x.....:.....:..x.....x..:..:.....:..:..:....................:..x..:......x..........x.....x..................................:.. 213M 178/213 83.6% 213/94230402 0.0% 0/213 0.0% 83323360 NA +6832 chr4 + 190214555 122189953 122189952 122190082 130 TATTCTGGAGATTTGTTTAGTTTGCTTTCCCCTCCACCTTC--TTATAGACCACCGAGATTAATGGGAGAAGGTTTTGTGGTGATGCAGTCAAATGATGTTGACATCTACTACTACATGGATGAGCCAGGTA chr4 - 94230402 38868776 38868775 38868907 55361496 55361495 55361627 132 TATTCTTTCATTATGCTTAATATATCTTCCCACTTTTTTTCCATTTCAGACCACCAAGGCTGATGGGTGAAGGTTTTGTGGTAATGCAGTCCAATGATGTTGACATCTATTATTATATGGATGAACCAGGTA ......xxx:x.x..:...:.x.:::.....x:::x::...--..x:........:..::.:.....x..............:........x.................:..:..:........:....... 41M2I89M 98/130 75.4% 132/94230402 0.0% 2/130 1.5% 83321177 NA +10741 chr4 + 190214555 122192175 122192174 122192384 210 TTTTTAATGGCCATTTTAAATAACTGCCTTTA--------TATTGTATGTTCTGGAATATAGGACTTGTTCCGGAAGAAACAGAAGAAAATATTGAAGGAGAAATGAGCAGTGAGGATTGCAAATTACAAGACTTGCCTCCATGTTGGGGACTGGATATAGTTTGTGGTAAAGGAACAGATTTTAATTATGGACCATGGGCCGATAGGCAGAGGTACT chr4 - 94230402 38870091 38870090 38870308 55360095 55360094 55360312 218 TCTTTCATGATAATTTGAAGGAGCTTCCTTTGGTAATCTCTTTATTATATTATATCATATAGGTCTTGTACCAGAGGAGACAGAGGAAAGTAATGATGGAGAAGCTAACAACGAAGACAGCAAATTACAGGATCTGCCACCATGTTGGGGTTTGGACATTGTTTGTGGAAAAGGAACAGACTTCAACTATGGACCTTGGGCTGATAGGCAGAGGTATT .:...x...::x....x..:x.:..x.....:--------.x.xx...:..x.:xx.......x.....x..:..:..:.....:....:..x...x......::x.:..::..:..:x..........:..::....x...........x:....:..x........x...........:..:..:........x.....:..............:. 32M8I178M 158/210 75.2% 218/94230402 0.0% 8/210 3.8% 83322084 NA +16196 chr4 + 190214555 122196600 122196599 122197306 707 AACATGTCATTATTCTTTCTACCTCCTTAATGTAGAGATTGTTTGTGGAAGTTTTTCTTTCCACCTGACTATCAAGTTCTGAAAGTTTCTGAAATTGCACAGCCTGGGAGACCAAGACAGATCCTTGCTTTTGAATTACGAATGAATATTATTGCAGATGCTACAATTGATTTGCTGTTTACCAAAAATAGGGTAATTATTATAATAATATAGTAGAAAATAGTATTTAA-----AATTTTGACATTATTTTTCAGAGT-------TTTTTCCTGGTGACTAGTCCCATACTTGGATTAATTTATATGAGCTGTTTTCCCTTGAAATAATTTTATGTATTTTACTATCATCATAATTTTGTTAAATGTCAAATAATGGGAAGAAA------TTAATAGTAATAGACCTTCATGCTATATTCTGGCTCATTTTCTCCTTT------------------------------------ATATCTGGCTAAATTGT--------TTTAGTGTATTTTTGGTAAAAATTTGAACTTTTGTTCTTAGGAACT--TGTAATACTTACTTAACATCAAT-----AATTTCTTCT----------------GTAATAATAAC--------TGAAAAGTAAAGATGG-----GAGAATAATTATAATTAATGTTTTATATGAATTAATTTTTTTCTTTTGGT--------------AGGAAACAAATGCTGTACATGTAAATGTAGGAGCTGGCTCATATTTAGAAATTAATATTCCAATGACAGTTGAAGAAAATGGTAAGCTGCAACT---GTTACTTTTCTTTTTAAAT chr4 - 94230402 38871969 38871968 38872740 55357663 55357662 55358434 772 AACAGCTCTTTTGTCTTTCTTCCCCACTA-----GGGATTGCTTGTGGAAGTTTTTCTTCCCACCAGACTACCAAGTTATGAAAATCTCTGAAATTGCTCAGCCTGGGAAACCAAGACAGATTCTTGCATTTGAACTGCGGATGAATATTATTGCAGATGCCACCATTGATCTGCTTTTTACCAAAAATAGGGTAAATAATGAAATCTTGTA-TGTAAAATGTTTTTTCAACTGCAAGTCTGCTGTGCTTTTTTTGGTTTCGCGTGTTTTTACTTGTGTCAGGTGC---------------TTATAAAAGCTA---------GGAGAAATTGTATTTATTTT-CTGTGATTATA------------GGCGTGTAATAGGATGAAACTTGCCCTGATGAAGACAGAATTTCTTCTGATAT--TGGATGAATATCTGATATCGCTGGAGAGATGATAGCAGGAGAAACAAAAGATGCATGTATGGGGGGGTTATAAATGGAGTGTAGCATAACTTCACTGAATGTCTGA--TTTCATTGCACAAAGCTACTCCATTAGTCATTTTTCGGTAATCATTGAGTTTATTTTTAACCCAGGTGTGTGGATAATAATAGCCAGATGCTTGAAATGTACTGGTTGACACTGAGGGT--CTAGAAATAATG-CTTGTGGGGtttgttttgttttgttttgttttTAAATCCCCACAGGAAACAAATGCTGTCCATGTAAATGTTGGTGCAGGATCATATCTGGAAGTAAATATTCCCATGACAGTTGGTGAAAATGGTGAGTTAAGGCTAGGATTAATTTATTTTCTTAAT ....xx..x..xx.......x..:.x:..-----.:.....:.................:.....x.....:......x.....:.:...........x..........:............:.....x......:.:..:....................:..x......:....x...................x..x.:x...xx.:..-.:x.....:x.x...x.-----..x.:..x::.xx.....:x.:x.-------.....x..x...x.x:..x.---------------.....x:....:---------.:.:x....x...x......-..:.x..:...------------.x.:x:....:...x....------:.:..::x:.:...x:...x.x:x....--...x.x.x.x...xx.x.------------------------------------..:.x...xx:::..:.--------.x...::..x:..::x.:..x:.:...--...::..x:xx::.:..--.x:.x..x.:.:..xx.:x:...-----.:...x..:.----------------:........:.--------.....x...xx.:.x.-----...::.--:..x..x.....-:..:.:x.:x..:x...x...:x...x..--------------................x...........x..x..x..x......:.:...:.x........x..........:x.........:..:.:x::..---:...x...x:...:.x... 29M5D178M1D17M5I24M7I20M15D12M9D20M1D11M12D19M6I28M2D18M36I17M8I27M2D17M2I23M5I10M16I11M8I16M5I6M2D12M1D29M14I94M3I19M 471/657 71.7% 772/94230402 0.0% 165/657 25.1% 83324631 NA +12733 chr4 + 190214555 122200843 122200842 122201132 290 TTGACCTTCAGCCACAGCAA--------------------TATTAAAGTCTCAAAGGGACCTTCTGTTCAGCTCAGTAGGAAAAT-GTTTTAATTACTCACTAGCGTGTGTA-------ACTTCATTTCTAATGCTGTTCACACAGTGTCACATTTTAAGCCTTAATTACTTTTA----CCTAACATTTGTTTTGCAGTTCCACATCAATGCCAGCTACCCCCGAATATGGAACATGCCGCAGACATGGCAGTGTGAATTAGAGGTTTATAAAGCCACTTACCACTTCATCTTTGCACAGAAAAACTTCTTTACAGGTAATT chr4 - 94230402 38874177 38874176 38874490 55355913 55355912 55356226 314 TTGACCTTCAAACTCAGAAAGACAGAGAGTGAGATTAAATTATTAAGGAACTGGAGTGGCCTTCTGTTCATCTCAGCAGGAAAAGAGTTTTAATTATTCAGCAAAGTACGTATGTGAAAACTGCTGCGCTACTG--GGTCAAACATTGTCATGTTTT------CAAATAATTCTAATGCTTTAATATCTTGTTCACAGTTTCACATTAATGCCAGTTATCCCCGGATATGGAACATGCCACAGACATGGCAATGTGAACTCGAGGTTTATAAAGCAACGTATCATTTTATCTTTGCTCAGAAGAGCTTCTTTACAGGTAACT ..........:x.x...x..--------------------......:.xx::::..x.:...........x.....:.......x-..........:...x:.:x..::...-------...x.xx:x...x..--.x...x...x.....::....------:..x..x..:..----::...:..:.xx..::.....:.....:........:..:.....:..............:...........:......:.x..............x..x..:..:..:........x.....:.:...............:. 20M20I45M1I26M7I15M2D21M6D12M4I143M 218/282 77.3% 314/94230402 0.0% 40/282 14.2% 83326666 NA +17277 chr4 + 190214555 122207088 122207087 122207745 658 TTCACTACCCCA-ATAATTTTAGATTTAATTCAAGACTGGTCTAGTGACAGTCCTCCAGACATTTTTTCATTTGTTCCATATACGTGGAATTTTAAAATCATGTTTCATCAGTTTGAAATGATTTGGGCTGCTAATCAACACAATTGGATCGACTGTTCTACTAAACAACAGGAAAATGGTAAG-----------------------------------------------------ACATTAAAAAAAATTAGGT--TAAATATTTCTCTCATTA--------AGGCAAATACCAACTAAGAAAATTAGTA---------TTGATTTG-ATAGTTTTAACAGATA-----------CTAGAAGT--------------TATTTCCCCCCATTATCTTTGTGAGACTCTCAGAAGACT-------GTTTCAGAGTTTGTATTGGACTAAA---ACTTAATTTTGTTTAGTTGTGCATT-------------TTAG--GCAATTTTATAATTGAAATTTAATGGACATTAAA------AGTAAATTT---ACTTTTTCTTCTTTTTTTTTTTTTTTTTCTTTTGTAGTGTATCTGGCAGCCTGTGGAGAAACACTAAACATTGATTTTTCTTTGCCTTTTACGGACTTTGTTCCAGCTACATGTAATACCAAGTTCTCTTTAAGAGTATGTATAGTTGAATGCATTATTTATTCCACAGGTGTATTAGTAAATTTGATTTCCCAAAGCT----TATCTTCACTCTCTTCT---CCCCAGTCCATTGCAACTTCAAAGTA chr4 - 94230402 38875563 38875562 38876349 55354054 55354053 55354840 787 TTTATTACTTTATGTAATTTTAGATTTGATCCAAGACTGGTCTAGTGATAGTGCACCTGATATTTATTCATTTGTTCCTTATATGTGGAACTTCAAAGTCATGTTTCATCAATTTGAAATGATTTGGGCAGCAAATCAACACAACTGGATTGACTGTTCCACCAAACAGCAAGAAAATGGTAAAGTCAGTTTAAGATTTGAAACAGTACACACAGTGACAAAATTTCTAGCATGTTTACTATGAAATGAATTCAGTGATAACTACTCATTTTGCTACTGTTGTTATGCATAAGCCACCCTAAAACTGCTGCAAGTCCTCACTTGTTTTGTATATTTCATACAAATATATACTTTCTCTTGGGAGTGTAGTTTCAGATCACATTTTTAGCATTCATTTTTG-AAGACCCTTTGAATGTTCAGAATAATTTGGTAATTTGTACT---CTAAATGCACAGCATTTTCCTTTGTCATGAGTTCACGTTTTTTTCCTTAATTGTACCTATATGTTTAATATTTGCCTAAGAACAAAATAGGGAGTCATTTTGACAGTGTTTTATTTGTTTGCTTTTCCTATTCTCTCCCAGTTTATCTAGCAGCTTGTGGAGAAACATTAAACATTGTTTTCTCTCTGCCTTTCACTGACTTTGTTCCAACTACATGCAATACCAGATTCTCTTTGAAGGTAAGTTCTGTTCTCT-CAGTGTCCCTCTCtt---tgttttgttttgttttgttttCTGAATGTGAAGTATTTTTACTTCCTTTTCTGCTTCAGT---TAGCAACTTTGAAGTA ..:.:...:::.-:.............:..:.................:...x.x..x..:....x............x....:......:..:...:.............:.................x..x...........:.....:........:..:.....:..:...........:-----------------------------------------------------..xx.:...x:....x:..--...x..:.:x.:.:::..--------.x...x.x:...x.:x.:..xxx:x.:.---------...x....-...x..:xx...:...-----------:.:.:...--------------:....::xx.xx.:..:....-:....:..:x...x::.-------:...x:x.:......:.---.....---..xxx.....x:..x..::..x:..-------------...:--.:.x:.x...:x..:.x....:x:x:.x.x:...------...x.x...---.x.x...:x.:.x...x:....::.x....:.:x:...x.....:.....:............:.........x...:...:.......:..x............:.......:.......::........:.::...x..x:x...xxx.-..x.:.::x.::.x:---...x..:x.xx:...x:...:.::..xx.----...:..:...::...:.---.::....---.x.......::..... 12M1I171M53I19M2I18M8I28M9I8M1I16M11I8M14I21M1D17M7I17M3D5M3I25M13I4M2I34M6I9M3I151M1D15M3D29M4I17M3I7M3D16M 459/647 70.9% 787/94230402 0.0% 151/647 23.3% 83331525 NA +12385 chr4 + 190214555 122209139 122209138 122209343 205 TTATTATAATTATTTTTTAGGGAGAAGATGTTGATCTTCATTTGTTTCTACCAGACTGCCACCCTAGTAAATATTCTTTATTTATGCTGGTAAAAAATTGCCATCCAAATAAGATGATTCATGATACTGGTATTCCTGCTGAGTGTCAAAGTGGCCAGAAAACAGTTAAACCAAAATGGCGCAACGTTACTCAGGAAAAGTGAGT chr4 - 94230402 38877104 38877103 38877308 55353095 55353094 55353299 205 TTATTAATCTTTGATTTTAGGGAGAAGATGTTGATCTTCATTTGTATCTACCGGATTGTCATCCTAGCAAATATTCTCTTTTTATGTTGGTGAAAGATTGTCAACCGAATAAAATAAATCCTGAATCTTGCATTTCTGGTGAATGTCCAAGTGGTCAGAAAACAGGCAAACCCAAGTGGAGGAACATTACTCAGGAAGAGTGAGT ......xxx..xxx...............................x......:..:..:..:.....:.........:.x......:....:...:....:..x..:.....:..:.x..x...xx..x.:...:...x...:....x......:..........x:.....x..:...x.x...:...........:....... 205M 164/205 80.0% 205/94230402 0.0% 0/205 0.0% 83332035 NA +8426 chr4 + 190214555 122209804 122209803 122209931 128 TTTACTCTTCAAAGGTCTGGTTGGGTTGAATGCTGGACTGTCCCAAGTGTCATGCTTACAATTGATTATACATGGCATCCAATTTATCCACAAAAAGCAGATGAACAGCTGAAACAATCATGTAAGTG chr4 - 94230402 38877423 38877422 38877550 55352853 55352852 55352980 128 TTTCTTTTTGAAAGGGCTGGATGGGTTGAATGCTGGACAGTCCCGTGTGTTGTGTTTACGATTGACTACTCATGGCACCCAATTTATCCTCAAAAGGCAGATGAGCAGTTAAAACAATCCTGTAAGTG ...x:.:..x.....x....x.................x.....:x....::..:....:.....:..:x.......:...........x.....:........:...:.:........x........ 128M 105/128 82.0% 128/94230402 0.0% 0/128 0.0% 83332381 NA +13051 chr4 + 190214555 122210885 122210884 122211113 229 AGTATCAGAAATGGAAGAGACAATGCTATCTGTATTAAGGCCATCCCAGAAGACATCAGACAGAGTTGTTTCTTCTCCCTCTACTTCTTCACGCCCACCTATTGATCCCTCAGAACTTCCACCTGATAAACTTCATGTAGAAATGGAACTTTCTCCAGATTCTCAGATAACTCTCTATGGACCTCTACTAAATGCCTTTTTGTGTATAAAGGTATGATTCTTAAAAACA chr4 - 94230402 38879562 38879561 38879787 55350616 55350615 55350841 226 AGTGTCAGAAATGGAAGAAACAATGCTATCTGTGCTAAGGCCATCACAGAAGACATCTGAGAGTGTGATTTCATCTCCCACTGCTTCGACCCGCCTTCCCCTCGACCCTGCAGAGCTGCCCCCAGATAAGCTCCATGTGGAACTGGAACTCTCTCCAGATTCCCAGATAACCCTGTATGGACCACTGCTTAAAGCCTTTCTATCTATAAAGGTAAG---CATAGAAACA ...:..............:..............::..........x...........x..x..x..x:....x......x..:....xx.x....:x..:x.:..:..:x....:..x..x..x.....:..:.....:...x.......:...........:........:..x........x..:..x..x......:.:.x..........x.---.x..:..... 216M3D10M 180/226 79.6% 226/94230402 0.0% 3/226 1.3% 83331323 NA +3016 chr4 + 190214555 122214580 122214579 122214645 66 CTTTTTGGTAACTATTTTTTTTTTTTTCAGTAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 42816628 42816627 42816693 51413710 51413709 51413775 66 CTTGTGGGCAACTATTTTATTCTCTTTCATTACAGGTTTTTTTTTTTTTTCCCCTTATTTGATGAG ...x.x..:.........x..:.:.....x..x.xx:.............::::..x...xx.... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 79397952 NA +18784 chr4 + 190214555 122219304 122219303 122220473 1170 TTTTGACAGCAAT--TTGTGTTTTCTTAATATTTATAGGAAAACTACTTTGGGGAAGATGACATGTATATGGATTTTGAAGAGGTTATCTCAAGTCCTGTTTTGTCACTGTCAACATCATCCAGCTCTGGGTGGACTGCTGTTGGAATGGAAAATGACAAAAAGGAAAATGAAGGTTCAGCCAAGTCAATTCATCCACTTGCCTTGCGTCCTTGGGATATTACTGTACTTGTTAATTTGTACAAAGTTCATGGGCGTCTTCCTGTTGTAAGTGTTT---ACACATGAAAGTAGTCTG--GAATATATTATAACATCCACCTGTGTATAGATGTGAAGCATTCAGCACACACTTAGAAAAAGAAAATCAGATTTAGAAACTTCTAAATTTATTCTTTTACTGTTATAAAACTCATGTATTTTCTTCATAA----TATGATTACTTGATCATTGGTAATTTTTATTTTCTATTTTTCTTCTAATTTAACTTTAGCTCCTTCTTTGCTATATGTGTAATGTCAGGACATCGTGTCATACATTGAGTTGTTGGGTTTATAATTAACCTGATGGGTGTTCA-----AGGACTTTACATTTTCTTAGCTTTTATCTCTAGACCCCAGACCAGTTTGGGGCCTTATGGTGGACCTGTTATAAAATGGAGTTTCTGGCTTGACCCTGGGGGTTGAATTATGTAGTTTGGATCTAGCACGGTATCCTGGGTCGCTCTAAGGACAACCTGTGGACCTGTTCTGGCTGACATGGAATGATATTAAATTGCCCCAAGAACCCAGGGACTTTGGTGCAGGGCCAGAT-GAGGTGTGTGTCCGGGTTGCAGTGGGGTGGTGGGGCCGGTGGCCCTCTGTTGCTTAGTGCAGCTAACGATCCTA------CTGAGGT---ACAGAATAGTTATTTTTCTCAGTAATCATAGTTTCTCTGTTTTTGAA---AAACAAATTCTCTTAATCATGACAGATGTAATTTTTATTTTCCTATACTTCCTTACT-TTTTGCCTTTTCTGCATTTCAA----CTGTGCTATTTCATTTG---------------ACTGTAGCATGGAACTACTGATGGTCCTGAATGCCCTACAGCTTTCTTGGAAAGACTATGTTTTGAAATGAAAAAAGGATTTAGGGAGACCATGCTGCAACTTATCCTGTCACCCCTGAATGTGTTTGTCAGTGATAACTATCAGGTA chr4 - 94230402 38881191 38881190 38882205 55348198 55348197 55349212 1015 TTTTCACTGCAGTCATTGCAAATAATTGATTTTCCTAGGAAAACTATTTTGGAGAAGATGACATGTATACTGATTTTGAAGAAGTTATTTCAAGCCCTGTTTTGTCTCTGTCAACATCTTCGAGCTCTGGATGGACAGCTGTGGGAGTAGAAAATGAAAAGAAGGAAAATGAAAGCTCAGTCAAACCAGTCCACCCTCTTACTCTACGTCCGTGGGATATTACTGTCCTTGTTAATTTGTACAAAGTGCACGGGCGATTGCCAGTGGTAAGAGCTTTAGAATCTTTAAAGTACTTTGTTGCTTGGATTTTTTTTTCCAGTTGCGT---GATCTGGAGCTTAATGTAACTCCCTAG-AACGTTAGGTTAGGTTAGGGAGGTGT-------------------TTTTAAAATGCATGTGTACTCTTCAGCAAAATTGTGGCTATCTAA-----AGTAATTTG------------------GGACATGGTTGGATTTGCTTATCTGAAATGTGAG------CTGGATATT---TTATAAATGATTTTTTTGAA--TAAAAAAAAGAAGATGGGTTTTTGTGATCAGTAGTTCATTTTTTTTTGATT---------------------------GGCAATTATGATTTCTCTGCTAGCAAAGCTATCTCCCGA-----------------------------------TAACAC---ATCCTG-------------------------CTCGTTGCAGCTG-CATTGTGAGGGATT-------CCCAAGAATTTAAAATCTAT--------TCCAGATAAAGGTTTGGGTAC-------------------GCTCAGATGGATTTGAATTGCT--GTTTATGTAACTGTTCCAAGATTTTTGAAGTTGCACAGA------GTTCTTTTTAATTATCA------------ACTTGAAGGCAAGCTAGCATACTTACTACTTACAGGTTTGCTTCTAATCTAAC--TACTTCAACAATGTTGTACGTTTTCAGATTCTGAAATAGCTGTTTGattttttttattattattattatttaCTTTAGCATTGTAGTCCCGATGGTCCTGAGTGCCCTACAGCTTTCTTGGAGAGGTTGTGCTTTGAGATGAAGAAAGGATTTAGAGAAACAATGCTTCAACTCGTGCTGTCTCCAGTGAATCTGTTTCTGAACGACAATTATCAGGTA ....x..x...:.--...::xx.xx..:..x..:x...........:.....:................:x...........:.....:.....:...........x...........x..x........:.....x.....x...:.:........x..:............:.:....:...::..:.:..:..x...:.::.:.....x..............x....................x..:.....x:.x..x..x.....x.:..---.xx.x.x......x.:..--.xx.:x...x.xx:x....x:..:..---...x..:...x.xxx.:.xx:x.:...-..x:xx.::.:..:..x:.:.:x.x:-------------------..x.....:x.....:.x:......xx.----.:..::..::.:.-----:.......x------------------x:.:x.:::.xx.x:.x...x.:..xx..:..x.------.x...:..:---.:...x..x:xx..x...::--..x..xx..xxx.......x..::-----..x.x..:.:x....:..:::.---------------------------..xxx.....:.xxx:...:..xx...xxx.x:.:.:.:-----------------------------------..:...---......-------------------------.::...x::....-...x.x:x.:x...-------........:::.:::x..x.--------x......-:....x..x..x.-------------------.xx.x.:...x::.xx:.....--..x:.xx....x:.:.:.------:...:..---.....------:..:..:.:.:.x....------------x:.....---..:.x.::x:x....x.xx.x....:.x.:x..:.x..:.xx.--......xx:.x.-..x.:.x.....x.xx.:.x..----....x:x....:x...:---------------...x......x.x.x.x.:...........:....................:..::.:..:.....:.....:...........:..:..x.....x.....::.x.....x..xx.....x.....x.x.::..:..:......... 13M2I261M3I18M2I26M3D27M1D26M19D28M4I13M5D9M18D34M6D9M3D20M2D24M5I22M27D39M35D6M3D6M25D13M1D14M7D20M8D7M1I13M19D22M2D18M6I7M3I5M6D17M12D7M3I43M2D12M1I22M4I17M15I148M 662/966 68.5% 1015/94230402 0.0% 253/966 26.2% 83338113 NA +11953 chr4 + 190214555 122224488 122224487 122224725 238 TTGTTTTCAGCAGCGACCCCCTGTGGATGAAGTACTCAGGGAAGGTCACATCAATTTGTCAGGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGGTCTTCCTTTGGGAAGCGATTCCTTAGAATACGCATGGTTAATTGATGTGCAGGCTGGAAGTCTTACAGCTAAGGTCACAGCACCACAGGTATGGTTTTCAGAGTACTATCTCCTGACTTATTTTCTTTTTCCTTTC chr4 - 94230402 38885581 38885580 38885817 55344586 55344585 55344822 237 TTGTCCTTGACAGAGACCTGCAGCTGATGAAGTCCTTCGAGAGGGCCACATTAGTCTGTCAGGTCTGCAGCTGCGTGCCCACGCGATGTTTTCTGCAGAAGGTTTGCCTCTTGGAAGTGATACTTTAGAATATGCATGGCTAATAGATGTGCAGGCTGGAAGTCTTACTGCCAAAGTTACAGCACCGCAGGTATCATCTAGAAACTGTTCGCT-GTGAAGTATTAACTTCCTTCTTTC ....::.:::...x....:x.x.:x........x..:x.:..:..:.....:.:.:..........x......x.x..x.....x.....:..x.........:.x...:.x.....:...x.:........:......:....x.......................x..:..:..:........:.......x:.:.xx.:.x.::.xx..-x...xx....xx...::.:..... 213M1D24M 176/237 74.3% 237/94230402 0.0% 1/237 0.4% 83338907 NA +9971 chr4 + 190214555 122226610 122226609 122226838 229 CTTTCAAGCTACGTTAACATTCTTC--AGAAGCTTTTGAACTCTAAACCCTTGTTTAGAATGCTAACAGTGTTGTCAACTTGTCACTGATTATCTGTAGCTGGCATGCCTCTTGGAGTGGGGACAGACATTTGTTTTTCATGTGGTATGTCGGGAGTATGAACTGGAAAGACCGAAATCAGTTATAATATGTCAGCATGGAATTGATCGTCGGTTCTGTGAATCCAAGGTA chr4 - 94230402 38887996 38887995 38888222 55342181 55342180 55342407 227 CTTCCAACCTTTAGTGATGTTCTTTCAATAATCTGTTGAACACTGTAAGTTCATTTTGCATACTTACTAT-TAGACAACATGTTATT---TGCTTACAGCTTGCAAGTCTTCTGGAATGGGGGCAGACCTTTGTGTTTCATGTAGTGTGCCGTGAGTTTGAACTGGAAAGACCAAAATCTGTAATAATATGCCAGCATGGAATTGACCGTCGTTTTTGTGACTCTAAGGTA ...:...x..x::x.:.::.....:--.x..x..x......x..:x.xx:.::...x.x..:..x..x:.-.x.x....x...:.:.---.:::.::....x...x.:..::....:.....:.....x.....x........:..:..:..x....x...............:.....x..x........:..............:.....x..:.....x..:...... 25M2I43M1D16M3D141M 165/225 73.3% 227/94230402 0.0% 6/225 2.7% 83338614 NA +7487 chr4 + 190214555 122229078 122229077 122229244 167 GTTGATGGTGATGATTTAGATGTACAATCCTTTTTTATTTT-----AGTTGAGTTGTATTCCTGGGCCTTGTCCAACTTCAGATGATTTGAAATATACTATGATTCGTTTAGCAGTAGATGGAGCCGATATTTACATTGTTGAGCATGGTTGTGCTACAAATATAAAGGTAA chr4 - 94230402 38888833 38888832 38889003 55341400 55341399 55341570 171 GTTGATTATGATGGTTTTT-TGTGTGTTTTTTTTTTTTTTTTCCTTAGATGAACTGTGTCCCTGGGCCATGCCCAACATCTGATGACTTAAAGTACACAATGACACGCTTAGCCATGGATGGTGCAGATCTGTATGTGGTAGAACATGGCTGTGCCACCAATATAAAGGTAA ......x:.....:...xx-...:::x.::......x....-----..x...::...:.:........x..:.....x..x.....:..:..:..:..x....:x..:.....x:.:.....x..x...x.x..::.x..x..:.....:.....:..x............. 19M1D21M5I126M 122/166 73.5% 171/94230402 0.0% 6/166 3.6% 83340245 NA +17282 chr4 + 190214555 122229925 122229924 122230219 295 TTTTAGATGGGTGCAATTCGAGTTGCAAACTGTAATCTCCACAATCAATCGGTTGGGGAAGGAATCAGTGCTGCAATTCAGGATTTTCAAGTGAGACAGTACATTGAGCAATTAAATAATTGCAGAATTGGACTTCAGCCTGCAGTGCTACGGAGGGCCTATTGGCTTGAAGCTGGGTCAGCCAATTTAGGACTTATTACTGTTGATATTGCTTTAGCTGCTGACCATCATTCTAAACATGAGGCACAAAGACATTTCTTAGAAACTCATGATGCCAGAACTAAGAGGTAGGTGA chr4 - 94230402 38891023 38891022 38891314 55339089 55339088 55339380 292 TTTCAGATGGGTACTATACGTATTGCAAACTGCAACCTCCACAACCAGTCTGTTGGAGAAGGTGTAAGTGCTGCTATTCAAGATCTTCAGTTGAGACAATATGTTGAGCAGGTGAACAACTGCAGAACTGGTCTTCAGCC---AATCCTAAGGAGGGCATATTGGCTGGAAGCTGGATCTGTCAACTTGGGGCTCATCACTGCTGACGTTGCTTTAGCTGCAGATCATCCTTCTAAACATGAAGTGCAGAGACATTTCTTGGAGATGCACGATAACAGAACCAAAAGGTGAGAGA ...:........:.x..x..x:..........:..:........:..:..x.....:.....x:.x........x.....:...:....:x.......:..::.......:x.:..:..:.......:...x........---.:.x...x.......x........x........:..x.:...:..:..:..:..:....:...::.............x..:....x............:.::..:...........:..:.:x..:...:x......:..:....::.x.. 140M3D152M 227/292 77.7% 292/94230402 0.0% 3/292 1.0% 83338902 NA +18616 chr4 + 190214555 122234660 122234659 122235030 371 CATTTAAAAATATTTACAATTAACTTATAT---TTAATTATCTATCAAAAAGTTTTTCATTTCTTAA--------TGATTTTTTTTATGTTGTTGTTTTTTGTTTTCTTTTGGGGTC--GGTTTAGGTTGTGGTTTTTATGGCCAGATGATATCCTGAAGAATAAGAGGTGTAGAAACAAATGTGGTTGTCTCGGTGGCTGCAGATTCTTTGGTGGCACAGTAACTGGCCTAGATTTCTTCAAACTTGAAGAGTTGACACCTTCCAGTAGCTCTGCATTTTCAAGCACAAGTGCAGAGTCTGATATGTATTATGGACAGTCTCTGCTACAGCCTGGAGAATGGATAATTACTAAAGAAATTCCCAAAATTATAGATGGTAATAA chr4 - 94230402 38891333 38891332 38891711 55338692 55338691 55339070 379 CATTTGAATGTGTTT-----TAGTGtatatatttttattttgtcttaattaattttaaatCCACTAAATGTGATGTGATTGTGTTTCTGTTTTCTTTTTTTTCTTTTCCTTCCTGCCCTGGTGTAGATTGTGGTTTTTGTGGCCTGATGACAATTTGAAGAATAAGAGAAGCAAGAACAAGTGTGGCTGCCTGGGTGGCTGTCGATTCTTTGGTGGCACGCTAACAGGACTGGACTTTTTCAAACTTGAGGAACTGACACCTTCAAGCAGCTCTGCTTTCTCAAGTACAAGTGCAGAATCTGATATGTTTTATGGTCAGTCATTACTGCAGCCAGGAGAATGGATAATTACTAAAGAGATTCCTAAAATTTTAGATGGTGAGAA .....:..x:.:...-----..::x.....---..x...x.x.x.:..xx.:....xx..::x:...--------.....x.x...x....x.:x......x:...:::..xxx.:.--...x...:...........:.....x.....:.x::.............:x.:.::.....:.....:..:..x........:x................:x....x..x..:..:..:...........:..::..........x..:........x..:.....:...........:..........x......x.....x:.:..:.....x.......................:.....:......x........:.x.. 15M5D10M3I34M8I42M2I265M 283/366 77.3% 379/94230402 0.0% 18/366 4.9% 83343327 NA +13436 chr4 + 190214555 122238061 122238060 122238357 297 TGTTCACTTAACCCACCTTTTGTTTGTT--TAGGTAATGTGAATGGCATGAAGAGGAAAGAATGGGAAAACAAATCAGTGGGAATAGAAGTAGAGAGAAAAACTCAGCACCTTAGTCTTCAAGTACCATTACGATCTCATAGTTCATCCTCTTCCTCAGAAGAGAACAGTAGTTCTAGTGCTGCACAGCCTTTGTTGGCTGGTGAAAAGGAAAGTCCTTCATCTGTTGCTGATGACCATTTGGTTCAAAAAGAGTTCTTGCATGGGACAAAAAGAGATGATGGCCAAGCAAGGTCAGTA chr4 - 94230402 38892173 38892172 38892471 55337932 55337931 55338230 299 TGTTCACTTTTTCTTTCTTATTTCCAATCCTAGGTAAAACAAATGGTGTAAAACGAAAAGATTGGGATTGTAGATCTATAGGTGTAGAAATAGAAAGAAAGGCACAACATCTAAGCCTCCAAGTGCCACTGCGCTCCCATAGCTCCTCATCATCTTCAGAGGAAACAAGCAGTTCCAGTGCTGCCCTGCCATTGCTTGCAGGTGAGAAGGACAGCCCGTCTTCAACTGCTGAGGATCACTTGGGACAGAAGGAGTTCTTGCCTGGTACAAAAAGAGAGGATGGTCATGGAAGGTTAGTA .........xx:.:x:...x.x.:::x.--.......x:::.....::.:..:x.:.....x.....xx::.:...x:.:..x:.....:....:.....::.x..:..:..x..:..:.....:...:.:..x..:.....:..x..x..x..:.....:..:.xx..:.....:........x.x...x...:.x..x.....:.....x..:..x..x..x::......x..:..:....xx..:..:..........x...x...........x.....:..x.x.....:.... 28M2I269M 210/297 70.7% 299/94230402 0.0% 2/297 0.7% 83345888 NA +50342 chr4 + 190214555 122239454 122239453 122240360 907 TGTTTTTATGCTTAAATTTTATGATGTATAGAAAATGGTAATAGCTTTGCTTTCTGTTTTAGTATCCCTACAGAAATTTCAGGAAACAGCCCTGTGTCTCCTAATACTCAGGATAAGTCAGTAGGTCAATCTCCTCTTAGATCTCCCTTGAAACGACAAGCCTCTGTCTGTTCCACCCGTCTTGGAAGTACTAAGAGTCTTACTGCTGCTTTCTATGGGGACAAGCAGCCTGTAACAGTTGGAGTCCAGTTTAGTAGTGATGTCTCTCGAAGTGATGAGAATGTACTAGACTCACCAAAGCAGAGGAGAAGTTTTGGTTCATTCCCATATACACCATCAGCAGACTCTAATTCATTTCATCAGTATCGATCAATGGATTCCAGCATGTCAATGGCTGATAGTGAAGCCTACTTTTCTGCTGCTGAGGAATTTGAGCCCATTAGCAGTGATGAAGGCCCTGGAACTTATCCGGGTAGAAAAAAGAAGAAAAAGCAAACCCAGCAGATTGACTACAGTAGGGGTTCCATATATCACAGTGTAGAAGGGCCACT------TACTGGACATGGAGAAAGCATTCAGGATTCCAGAACTCTGCCATTCAAAACTCATCCTTCTCAGGCTTCATTTGTTTCTGCGTTAGGTGGAGAAGATGATGTTATAGAACATCTATATATTGTAGAAGGTGAGAAAACAGTGGAGAGTGAACAGATTACTCCGCAACAACCCGTGATGAATTGTTATCAGACTTACCTTACTCAGTTCCAGGTAATTAATTGGTCAGTTAAGCACCCAACCAACAAAAGAACCTCTAAATCCTCATTGCATCGTCCCCTTGATCTGGATACACCAACCAGTGAAGAAAGTTCATCGTCATTTGAACAGCTTTCTGTTCCAACTTTTAAGGTATAAA chr4 - 94230402 38892971 38892970 38893864 55336539 55336538 55337432 894 tgattctatgattttGTTTTATGTTGT-------------------TTCATGTATTTTTCAGTGTCTCAGCTGATGGTGCGGAGGGAAGCCCTGCATCCCCTAGCAGCCAAGAAAGGCCTGTTGGTCAGTCTCCCATGAGGTCTCCCCTGAAACGACAGGCATCTGTGTGTTCAACTCGGCTCGGCAGCACCAAGAGCCTCACAGCAGCTTTCTATGGAGACAAGCAGCCCGTTCCAGTTGGTGTGCAGTTCAGTAGCGATGTGTCTCGCAGTGATGAGAATGTGTTAGACTCTCCAAAGCAGAGGAGAAGCTTTGGTTCTTTTCCTTATACTCCATCTGCAGATTCAAATTCATTTCACCAGTATCGCTCAATGGATTCCAGTATGTCAATGGCTGATAGCGAAGCTTATTTTTCTGCAGCAGAAGAGTTTGAGCCAATTAGTAGTGATGAAGGTCCAGGAACTTACCCAGGGAGAAAGAAGAGAAAAAAGCAAGCTCAGAAAATTGAGTACAGCAGAGGGTCTATTTATCACAGTGTGGAAGGACCCTTAACAAGTTCTGTCCATGGCGAAATTAATCAGGATGTTAAAACGTTGCCAATTAAGACTCATCCTTCACAGACTTCATTTGTTTCAGCTCTGGGAGGGGAGGATGAGCATATTGAAAACATTTATGTCATGGAATCTGAGAAGACTGTAGAAAGTGAACAAATAACATCCCAACAGCCTGTAATGGCTTGTTACCAAAACTATCTTACGCAGTTCCAGGTGATTAATTGGTCAGTAAAGCATCCAACTAACAAAAGAACTTCAAAATCCTCATTACATCGCCCTTTAGACCTTGACACACCAACAAGTGAAGAAAGTTCATCGTCTTTTGAGCAACTTTCTGTTCCTACTTTTAAGGTATGAA ..x..:....x..xx:.......x...-------------------..xx.x.x.x...:...:..:.x:.x..x:x.x.:.::::x.......::..:....::.x:..:..x.:.:.x..x.....:.....:x.x..:......:..........:..x.....x.....x..:..x..:..x..:..:.....:..:..x..x...........:...........:..xx.......x..x.....:.....:.....x.....x..............::.......x.................:........x..:..x.....x.....x.....:..x...........:........x..............:.................:.....:..:........x..x..:..:........x.....:...........:..x........:..:..x.....:....::.........:.:...x.:.....x.....:..:..x..:..x...........:.....:..x:.------.x...xx.....x....x:.x.......x::.:...x:.....x.:..:...........x...:.............x..x:.:..x..:..:.....xxx...x...x.:x.x...:.::.:...xx......:..x..:..:........:..x..x:.x.....:..:..:...:x......:..:.x:..:.....x...........:..............x.....:.....:...........:..x...........:.....:..::.x..:..x..:........x....................x.....:..:...........x.............:.. 27M19D505M6I356M 693/888 78.0% 894/94230402 0.0% 25/888 2.8% 83346483 NA +6069 chr4 + 190214555 122242959 122242958 122243116 158 ATATATTAAAAATCTAGACTATAGTATTT-----TATATTCTAGGTTATCAAGCAGGGGCTCACAGCTAATTCTTTGCTAGACAGAGGCATGCAACTTTCAGGATCAACTTCAAAGTAAGTAAAAATATCATGCTTTTA-------AAGTGTCTTCCTTGATTATGAGAT chr4 - 94230402 38894650 38894649 38894819 55335584 55335583 55335753 170 ATATACAGAAGGAGTATAATATATTTTTTGTACTTTTCTCTTAGATTGTTAAGCAGGGTCTCACAGCTAATTCATTACTGGACAGAGGCATGCAGCTTACAGGATCAACATCTAAGTAAGTTGAAACTGCATAACTCTGTTAGCATATGTGTTTTTTTTCAAAATAGGAT .....:x:..::xx..x.x....x.x...-----.x.x.::...:..:.:........x..............x..:..:..............:...x..........x..x........x:...:xx...:x:.:.:-------.x....:..::..x.xx..::... 29M5I105M7I24M 113/158 71.5% 170/94230402 0.0% 12/158 7.6% 83348309 NA +11599 chr4 + 190214555 122243823 122243822 122244030 208 TAATATACAATTTGCTTGTTAAATTGTATAGTACGCCGTATACTCCATTGGAAAAAAAACTCGCTGATAACACAGATGATGAAACATTAACAGAAGAGTGGACCCTGGATCAACCAGTGTCCCAGACCAGGACAACAGCCATAGTTGAAGTAAAAGGAACTGTTGATATTGTTTTGACTCCCCTGGTGGCTGAAGCTTTAGACAGGTA chr4 - 94230402 38895430 38895429 38895629 55334774 55334773 55334973 200 TAATATATATTTGACTTGTT--------TAGTACACCTTATACTCCTTTGGATAAGAAGTCTGCAGAAAATACAGATGATGAAACTATAACAGAAGAATGGACATTGGATCATCCAGTCTTCCAGACAAGGACAACAGCAATAGTAGAAGTAAAAGGAACTGTAGATGTAGTTCTGACCCCTCTTGTAGCAGAGGCATTGGACAGGTA .......:.x..x:......--------......:..x........x.....x..:..::::..x..x..:..............xx..........:.....x:.......x.....x.:......x...........x.....x.................x...:.x...:....:..:..x..:..x..:..x..:........ 20M8D180M 161/200 80.5% 200/94230402 0.0% 8/200 4.0% 83348393 NA +8370 chr4 + 190214555 122244884 122244883 122245147 264 CTTAGACATTCTCATTTCAATGTTGAGCAATTGTTGTACATATTCAGATGGTGCTACGTTTCATGATATGTTTACATAAACTAAGTTGTAGAATCAACGACATTTAAATATTTCATTTACTGTTTTTTCCCCTCA--GATATATTGAAGCAATGGTTCATTGTGCTAGTACCCGACATCCAGCTGCAATTGTAGATGATCTTCATGCTAAAGTCCTCAGGGAAGCTGTCCAAAATAGCAAGACTACCTTTTCAGAAAATGTAAGAA chr4 - 94230402 38895854 38895853 38896081 55334322 55334321 55334549 228 CTTAATTTTTCTCTTTGCAGTGTTAATTAAGCCTTACA-----------GGTGGTACGTTACGTGA----------------AAGTGGAAG-----------TTTCAATATTCTTTGTGGGCTTGTTCCCTCTCACAGGTACATAGAAGCAATGGTGCACTGTGCTAGCTCTCGACATCCAGCAGCCATTGTTGATGATCTTCATTGCAAAGTTCTTCGAGATGCTGTACAGAACAGCAAAACAAGCTTCTCAGAAAATGTAAGGA ....:x:x.....x..x..:....:.x:..x:x..::.-----------....x......x.:...----------------....x.x..-----------...x......::x.x.:xxx..x..:..:....--.:..:..x...........x..:........:x.:...........x..x.....x............xx:.....:..:x.:..x.....x..:..:.....:..x.x...:..............:. 38M11D17M16D9M11D33M2I129M 167/226 73.9% 228/94230402 0.0% 40/226 17.7% 83349030 NA +23317 chr4 + 190214555 122246144 122246143 122247360 1217 CTTTTTAGTTATCTTCCAAACAAGACATTAGAGGAACAAAAACTGAGCAGTCTACAATAGGAACGACTAACCAAGGACAAGCACAGACAAATCTTACAATGAAGCAAGATAATGTAACAATTAAAGGTCTTCAGACTAATGTTAGCATACCAAAGGTAACAATTTAATATTTAAAAATTTTTTCCTGAAAGAGGAGAGCATTTTGA-------TGGTGTTTG--TCCTTTTCAGTTACCAACGTGAATAATGGTAGAACAGTGTGTAATATTAAAAAAATATGTTTTATTTCTATGATCTAATGTAGATCTAATGGAATGTAAATAGTTTACTTAAGCAGAATATTAGGTAATAGTA----GAATGTTCCACATCCATCCAGTAAAAATTTAATTATGATTATTTTATGAGAATCTGTATTCATAAGC---------TTTGTCTTCACTGTCAAATACATAGATATGCCATTCTTAACAGTAGTTTTTCATTTTTGTGCATATTTTATGTTTAAGTGGTAATTTTTCACTTGTCAGTTCTGAAATTTTGTGTGTGTGTTAGGTAAACTTATGTTTGTTACAAGCCTCAGTGGAAGAATCTCCAACTACGGCTCCTAGTAGGAGTGTGACTCATGTTTCCCTAGTGGCATTGTGTTTTGACAGAATTGCTACACAGGTTCGCATGAACAGGTAAGAAATACTTTATTAATCTGAGCCATGATTATCT--TGCTGGATGTAAAAGCAAGCCTTGAT----CATCTTTTCTTTTAAAAA------TACATTTCT--AAGAATGTAATGTTAAAAC---TCA-GAACTGGTTTTGGAATTTCAAAT------CTTAATTTATAGATTAGTAACATATGTCTTTAAAAAATTTTTACTGTTTCTATTCATAGT---ATCTTTCAGTAAACATT---GAA--TAATTTTTTACTACT----ATTGGTGT-ATA-ATAGTAGAGTGTTTTGTTTTTTTTAAAGGAAACCTTTTAGG------TAAATGTTTTCT----CTGAACTG-----------TATTATTTAAA--------------------------TGTTAAACATTT------TACTCTCTTTTTTTTCAT----AAAGAGGTGTGGTTGAAGAGACTTCAAACAATGCAGAACCTGGTAGAA----CATCAAATTTTGATAGGTATGTTCATGCCACAAAGATGCAGCCTCAGTCATCTGGATCTCTCAGATCAAATGCTGGAGCAGAAAAAGGCAAAGAAATTGCAGCTAAGTTAAACATTCATCGAGTTCATGGGCAACTTAGGGGTCTTGATACAACAGGTA chr4 - 94230402 38896966 38896965 38898212 55332191 55332190 55333437 1247 CTTCCAAGTTATCTTCCAAGCAGGATATCAGAGGAACAAAAATAGATGCTACTACTACAGGAACAACAAACCAGGGACCAGCACAGACAAATCTCTCACTTAAGCAAGATAATGTGACAATTAAAGGCCTTCAGGCCAACGTAACTGTACCAAAGGTAAGAACTTTTCATTGAG-----CTTATTTAGTAGATGTACACCTCATAAATTACCCTTATTTTTGAGTCCCTGTCAGTTCCTGGAAAGCTTAA--GTGAAACTGTGT---ATTTTTGATAGGTAACTAATGTTTTGA----ATAGAGTAGACTGTTTTGGAGATGCCTAATCTTATTATGCAGA----TGTGTAAACACATCAGGGATGTCTTTTA-----CCTTTAAAAGCTTCATT---------------------TTACTCAGAAGTATAAGACCACTTATCTTGCTTATAAAATA-----AGATTGCATT------GGAAGTTTGTGATGTA---ACATGATTT---TCTAAAT-----TTATTTACTCTTTGGT---GAAATTTTCCATAT-----AGGTGAACCTGTGTTTACTACAAGCATCTGTTGATGAATCCCCAGGGGTTTCTTCAGGCAAAACTGTGACTCATGTTTCATTAGTAGCTTTGTGCTTTGATCGAATTGCTACACAAGTTCGTATGAATAGGTAAGAA--------------TAAAACATCACTATTTGTTGCTT--TTTAATCAAAAGACTTAAAGTGATGCCAATTCTTTTGAAACATAGCTTACAGTTCTGAAAGAAAGTATTTTAAAAGTATGTCATGAACGAGTTAAACAATAAAATATGTCTTCCATATGTTATAAATTAACATCTAATATCTAATTAAAACTGCAACTTATTTGAGAAGTGGAGGAACCCATCTGTAATCGTTTTGGAACTTAAGTTTTAACTCTTTCTCAATGATGTCATACAGAATAAAATGAATTTTTTATCCAAGTGTAATTATCTTACGACCTTACAAAGAATTTCTAATGCTGCCATGCCAATGTGGCTTAAAATTTAAAATGAAAATAATCCAGTGAACCACGTCTGTCAGAAATTTGCTTTATAGTCTTTTCTCCTCTGTGTTCAAAGGGGTATAGTTGAGGAGTCTTCAAACAATGCAGAGATTGGGAGGAATTCTGTCACATTT-GATCGTTACATCCAAGCCAGTAAAATGCAGCCTCAGTCTTCTGGCTCACTGAGATCTAATGCTGGAGCAGAAAAAGGAAAAGAAATTGCTGCTAAACTGAATATCCATCGTGTTCATGGGCAGCTTAGAGGCCTCGATACAACAGGTA ...::x.............:..:..:..:.............:x..xxxxx....x.:......:..x.....:....x...............:x..x.x..............:...........:......:.:..:..x.x::............x..:..xx:...x.:-----:..x::.::x...x.x:x:.x.:x.:.-------.x:.x....--...:.x......x.:::x:x.xx...--..::...x....---..x..x:.x.::..xx.xx.:...:x.----x..:x.....::xxx.x.:.x:.:xx..:.:.xx...x.....----.:x....xx::.----.:....:::x:.-----..xx.....::..x...---------------------x..:...x...:---------:..:....xx:.:.x.....-----.x..xx....------:.x.....x.x..x.x---:...:x...---.:...:.-----..x..:...:x.::..---........x::.:.-----....:...:.:.....::.......x..x..x..x.....:...:xx::xx..:.x:.:.::.x...............x:....:..x.....:.....:x.............:.....:.....:.........--------------.:.:x...x.:...:.--....x--.x...xx:x...x...:.x----:::.xx.......:...x------....x....--.....x...x.x.x...::---...-....x:...xx:x...xxx.x..------.x..xx.....:....::.x.xx..:...xxxx....:.x:x...xx..:x.xxx:.:.x---.:.:x..x....x.:..---...--...x....x...x:.----.x..:...-...-.x.:..:.:..xx..x...x.::x.:x.x..x:x.:...x.------:...x:x.....----...xxx..-----------..xx.......--------------------------...:.:.x....------..x...:..:.::.:::.----....:...:.:.....:...x................:x:...x..:.----::...x....-...x.x..::.:..x....xx..:..............x.....x..x..x.....x....................x...........x.....::.:..:..:.....x...........:.....:..:..:............. 174M5D27M7I9M2I26M2D12M3D27M4D43M4D12M4I12M5D17M21D12M9I20M5D10M6D16M3D9M3D7M5D16M3D14M5D137M14D16M2I5M2D19M4I18M6I9M2I19M3I3M1I23M6I60M3I17M3I3M2I15M4I8M1I3M1I41M6I12M4I8M11I11M26I12M6I18M4I48M4I10M1D148M 777/1126 69.0% 1247/94230402 0.0% 212/1126 18.8% 83349178 NA +22326 chr4 + 190214555 122249449 122249448 122250575 1127 TTTAAAAATG-GTCATTTTGCTCTCTTTTGATAAT-----------------------AGACATTGGGACCTGTGCAATCACTGCTATTCCTTTTGAGAAGTCCAAAGTTTTATTTACTCTTGAAGAGTTGGATGAATTTACTTTTGTGGATGAAACTGATCAGCAAGCTGTTCCAGATGTAACTCGAATAGGTCCCAGCCAAGAAAAATGGGGATGGATAATGTTTGAATGTGGACTTGAAAATTTAACCATAAAAGGCAAGCATTTTTTATTGAATTCTGCTTAAGGTGGGGACAAATATGTCCTATATTGCAGAAATGTTTTG----------AACAATCATGGCTTTCAGTAACCTGAATCAACATAATAAAGCAGAAAGTGTGGTATCTGGGATTATTTACCGGGGGTGAGTGCCTCATACCAATTGCTTAAGTGGAGCTTTTCCTCCATTATGTGATTTCCAAAGTAGGTAGAGCTTGAAAAACAACAATATGTTTTTCCGAATAAATTCCCAAATAAAATATAAAGCCACCCAATTTTTTGAAACTTTGCATCTTTGAAAACTGGATCTTTGGTCAGTAGAATTATGCCATATAGGATATAAAAACTGTAAATTCTTTATTCAGCGAAAAATATCTACTTAGAATTATATTTGCTTT--TTTATATATTCTTGAGTAATAGCTCAAAAAGGAAGGTTGAAA-TGTGTATAA----------CACTTTTTTTAGGTTTAGTAATATATAATATAGTAACTACTAT-----AAATAATAGTAGTTGTATATGCCTACAATTATTTACCTGATAATTCAGTGATACATTACTTTTATAGATTAGGGCAAAGACTTGGTGAGAAAAAAATAGTCTTTATGAAATTTTATACAGATATTGTAGAGTACAGCATTAAGACACTTATTCACCATTTATAATAAATGCTTTTTTTTATTTTTATAGGAGGAAGACAGTCTGGTGCTGTTTTATATAACAGTTTTGGAATTATGGGTAAAGCTAGTGACACAGAAAGGGGTGGAGTGCTGACATCCAATAATTCTTCTGATTCTCCAACCGGCAGTGGCTATAATACTGATGTCTCTGATGATAATCTTCCATGTGACCGGACAAGCCCTTCCTCAGACTTAAATGGAAATTCTGTTTCAGATGAACAGGT chr4 - 94230402 38900042 38900041 38900912 55329491 55329490 55330361 871 TTTGAAGATGTAACGTTTTTCTTTCATTTAGTAATTGGTGCTAAACATATTTGTTTCCAGATATTGGGACTTGTGCAATAACAGCCATTCCTTTTGGGAAATCGAAAGTTCTTTTTACTTTGGAAGAGTTGGATGAGTTTACTTTTGTGGATGAAACAGACCAACAAGCTGTTCCAGATGTAACTCGAATTGGTCCTAGTCAAGAGAAGTGGGGTTGGATAATGTTCGAATGTGGAATTGAAAATTTAACCATAAAAGGTAA------------------------------GGCTATGTATGCTTTATATT-------TGTTTTATGAAACTGGTAACAGTTGTGCTGCTGGGTCCTCTGGTT-------------GAGGAATTATGG--TTTAAAATTGCTGAATATAGGTA--------ATACTAAAT-----AATAGAGCTATT-GTCCAT------------AAAACACGTAACACT--------------------------ATAGATTCTATAATAAA--------------------------------------------TATACTTTTAGTCATTAATGCTACTTATCATAGTGTAGAAA-----TTAATTC----------------------CATAGAA----ATTGGCTTCAATTTCTGAAATCTACAG--AAAGCTCTAGAAATAGCTTTTAAATTGTATGTAAATTGATAGTGCATCTTGTTTAATCAGAATCATATATTTCTTATTAAGTACAGTATGGGACGTAACAATAGAAGTATATGC------------------------------------------------ATGGCAAACATTT------------ACAGTTTTGGTG---------------------------------------------------------TGTGTGCTTTTT----------TAGGAGGAAGACAGTCTGGTGCGGTATTGTATAATACATTTGGTGTCATGGGTAAATCAAGTGCCACCGAGAGAGGTGGACTGCTTGCATCAAATAACTCTTCAGATTCTCCAACTGGTAGTGGTTATAATACTGATGTGTCTGAAGATAACCTTCCTTGTGATAGAATAAGTCCCTCTTCAGATATTAATGGAAACTCAGTTTCAGATGAGCAGGT ...:..:...-:x.:....x..:..x...::....-----------------------...:........:........x..x..:..........:...:..x......:.x......:.x..............:....................x..:..:..........................x.....:..:.....:..:.....x...........:.........x......................:..------------------------------..x:.x:....:::......-------......:----------....:.::..x:x:.x:..xx:...:x.-------------x..:..x.:...--.:.:::...::.x.x::x:...:--------....:..x.-----.:.:.....x..-x.....------------...::.x...:x:..--------------------------...:....:xx......--------------------------------------------.:x.::...:....x..:x::..:x:xx:....x:..x...-----.x.....----------------------.x.....----...x....:--...x.:x.x...xx..--.x.....x.:..:x.:xx..x...-...:.:...----------..::..x....:x:xx.:.x......xx:x..x...x...x:.-----.x:...:.:...xx........------------------------------------------------.x......x.:..------------.:...:..x:..---------------------------------------------------------.:x:........----------......................x..x..:.....:.xx.....x:.:.........x.x....x...x..:..:......x....x:....x.....:.....x...........:..:.....:..............x.....x.....:.....x.....:x.:.:...:..:..:.....:x.x........:..x...........:..... 10M1I24M23I204M30D20M7D7M10I28M13D12M2D23M8D9M5D12M1D6M12D15M26D17M44D41M5D7M22D7M4D9M2I16M2D24M1I9M10I43M5I22M48D13M12D12M57D12M10D217M 614/819 75.0% 871/94230402 0.0% 360/819 44.0% 83349407 NA +11021 chr4 + 190214555 122254083 122254082 122254349 267 CTTTCCCAGACTTGATTTGATGAAAAGGTT--TTGCACTTAAAACATTAGCCTCTGTGTTAGTGGTTTTAAG---GGGCTGTATGTTAATAAGTTTTTGGCATTCTATTTTATAT----AGGATGAAGGAGTCGAATCTGATGATTTGAAAAAAGATCTACCTCTGATGCCTCCTCCTCCAGATTCATGTAGCATGAAGTTGACCATTAAAGAAATTTGGTTTAGTTTTGCAGCTCCCACCAATGTGAGATCTCACACACATGCATTTTCTAGGTA chr4 - 94230402 38901119 38901118 38901389 55329014 55329013 55329284 271 CTTTGCCTAACTGGAT---ATGAAACAGTTCATTGCAAACAATGCACTGTAGGATATGTTACTGCTTTTTAACATTAACTGCTTTGGAAAAGAGCTTTGAC--TCTGTTTTGTGTTTTAAGGACGAAGGGGTTGAATCTGATGATCTGAAAAAAGATATCCCTTTGATGCCTCCTCCACCTGACTCTTGCAGCATGAAGCTAACGATCAAAGAAATTTGGTTTAGCTTTGCGGCCCCCACCAACGTGCGATCTCCAGCCCATGTATTTTCAAGGTA ....x..x:...x...---......x:...--.....xx:..x:..:.:xxxxx.:.....x..x....x.:---x::...:x.xxx..x.::x:....:.--...:....:.:.----....:.....:..:............:...........x.x...:.............x..x..:..x..:.........:.:..x..:.................:.....:..:........:...x......xx:.x....:......x..... 16M3D11M2I40M3I26M2D12M4I157M 195/262 74.4% 271/94230402 0.0% 14/262 5.3% 83352964 NA +12083 chr4 + 190214555 122254772 122254771 122254958 187 TTGTTTTTATAATTTTTTATTTATGTTAAAAAGGCAGCTGAACCTTTTAAGCACTGCAACACCAGCTGTTGGTGCATGGCTTGTTCCCATTGACCAACTCAAGTCATCTTTAAACAAATTGGAAACTGAGGGAACCTTGAGAATTTGTGCTGTTATGGGATGCATAATGACAGAAGCATTAGAGGTA chr4 - 94230402 38902340 38902339 38902526 55327877 55327876 55328063 187 tttttttttttttttttaattttCCTCAATTAGGCAGCTGAACCTCCTGAGTACTGCAACTCCTGCAGTTGGCGCTTGGCTTGTTCCCATTGATCAAGTGAAATCATCTTTAAATAAACTAGAGACTGAAGGAACCCTGAGAATTTGTGCTGTTATGGGTTGCATTATGACAGAAGCATTAGAGGTA ..x.....x.xx.....x....x:x.:..xx..............::.:..:........x..x..x.....:..x.................:...x.x..:...........:...:.:..:.....:......:......................x.....x..................... 187M 155/187 82.9% 187/94230402 0.0% 0/187 0.0% 83352432 NA +11588 chr4 + 190214555 122255110 122255109 122255293 184 ATTGTTGTTTCTTGATTTTAGAATAAAAGTGTACATTTTCCCCTAAGAAGTAAATACAACAGGCTTACAAAAGTTGCTCGCTTTCTCCAAGAAAATCCTTCATGTTTACTATGTAATATACTACACCACTATCTGCACCAGGCAAATTACTCCATCATTGATGATGCTACAATGGTAAGTTACT chr4 - 94230402 38903550 38903549 38903732 55326671 55326670 55326853 183 ACTGTTGCATTTTAATCT-AGAATAAAAGTGTGCACTTTCCTCTGAGAAGCAAGTACAACAGACTCACCAAAGTGGCTCGTTTCTTGCAAGAAAATCCTTCTTGTTTACTGTGTAACATATTGCACCATTACCTGCACCAAGCAAACTACTCAATTATTGAGGATGCCACCATGGTGAGTCACT .:.....:x.:..:..:.-.............:..:.....:..:.....:..:........:..:..x.....x.....:..::.x..............x........:.....:...:.:.....:..:........:.....:.....x..:.....x.....:..x.....:...:... 18M1D165M 147/183 80.3% 183/94230402 0.0% 1/183 0.5% 83351560 NA +18134 chr4 + 190214555 122257242 122257241 122258846 1605 ATTATTGTTACAGAGCGATGGACTTCCTGCTTTGGTAACTTTGAAGAAAGGTTTAGTTGCACTGGCAAGGCAGTGGATGAAGTTTATTGTGGTGACACCAGCCTTTAAAGGAGTTAGCTTACATAGACCAGCTCAGCCTCTGAAACCTCAAATAGCTATGGACCATGAACATGAAGATGGACTTGGATTGGACAATGGGGGTGGTCTTCAAAGTGATACCAGTGCTGATGGAGCAGAATTTGAGTTCGATGCAGGTAGTTTTGTAAGCCTCTATTGAGTACTTTCTTACACCTCACAAAACTAGGGTGTTTTCTTACTCAACACAATTACTGTATGTTTTTTGCTTAGATATTATGCATCTTTTATCAGTA-AGTTAATATACCTCTTTAAAA-----ATGTCAAGACCCTTTGTTTTTCCTCACAGTTACAAATAAATTACTAATATAAGCAATTTTAGATATTACATACTTGTTAATATGGTACTTGTGATAATTTTAATAATTCATGTCCCAAATTGGAAAATGGTCATGGCTTAAGTATACACGTATGATTTTTATTGGCCA-AGTAAGTGATAATGATTAGGAATCTTCATACTGACCTGATTTTATAAGTTCAGTTTTGTGAAATACAGTAGACTTCTCTTGATCTATCCAGGACAAAGATAATATAAGTAGAACGTTTTGAATGAAACACATAAACCT-------CTATTTAAAACTTGTATTTGTCTGTCATCTTCCCTATGCCACAGTATTTTAAAGGGGCCTTTGTCTTTTTACCTGATGCCTGCTTGATCCTGAATTTATGTAAACTTTGGGG------CCTGCGCTCAGCCTACAATTTTGTCAACAAAATGGCTGTGTCAGAATAAAGATAGTGGATATACATTTATGAAATGTACTTGCA------TACCTTAAGCTTTGCCAAAG--------ATTAATTTTTATTATCATGACCTATCATATTTATTGAAAATGCATGTTATGATGTTTTGAAAAAAATATTGAAAGAGTAGTCTTAGAGATTTTAGAACATTGATATATAAAACTTTACCAAGCTTAGTTTTAAAAATAACTTGATATTTAACAAATA-AATGAGTTATGAGGAATAGGGTAGATTTTATTACTTATTTTAGAAAATTTCAAATCTACACAAAAGTTTGAAAACCAGTACACTGAATATCCCTTCCAATTATCTGCAAATCCCTCTGTTAATCTATGAGCAGTCTGTGCTTTCTTGCGCTTAGTTGAATTGACTTTTGGTCC--------GAGTATCATTTGCATGGAATATGTGAAAGTCTAATAAAAGCCGTTTGTTCCT-TTCTTGAAACTGAGTGAGA-GGATTGGGGTGGGGGAGAAAATAATAAAT--ATTTGTCAAGGAATATGAAAGTTGAGTGTCATTATATAACTAGAAACATAGGGGCTGATGTTTCAT----GAAAATGTGTGATAATCTATTGCTCACTTATTCTTTTGAACTGTTTCAGCCACAGTCAGTGAACACACAATGCTATTAGAAGGAACAGCTAACCGGCCTCCACCTGGTAG------CTCTGGACCTGTAACTGGAGCTGAGATAATGAGGAAACTTTCTAAAACTCATACCCATAGTGACTCTGCATTAAAAATAAAGGTA chr4 - 94230402 38904959 38904958 38906340 55324063 55324062 55325444 1382 atttttttta-aGAGTGATGGCCTTCCTGCTTTAGTTACCTTAAAGAAAGGTCTGGTTGCCCTAGCGAGGCAGTGGATGAAGTTCATTGTAGTGACTCCAGCCTTTAAAGGAGTCAGCTTACACAGACCAACTCAGCCTGTGAAACTACATACAAATGTTTGTCGTGAGCACGAGGATGGGCTTGGATTGG---ATGGAGGGGGTCTTCAGAGTGACACAAGTGCTGATGGAGCAGAGTTTGAATTTGATGCAGGTATTTTAGTGTTCTTCTCT------CTTCCTAAAAGCTCACAGGGACAAATAACTTCCT--CTCAAAGCATTTAATG------CTTTGA--AGATACTATAT-TCTTTCTTCAGAATCATCAAGCTGCTTTTATAAAATCTTCATGTTGAAACCACTGGTT----------------------------------GTAGTGTTA-ATTTAATATAATTG----TATGTCATTTGGGGAAAAG---------------CAAAACAGGAAACC--TCATGTCTTACTT-----CACATGCCTTGTCTTATTCACAGCACAAAATAC--ATC----ACCTTTATTATTTTATTAGCTTGCAATTACAATTTTGT--CATGCAGT-------TTCTAATCT--------------TATTTTAA------------GATTGTAACACACAACTCTATAAACGCTCTCAGGAACAGCTTCAAATCTACTATCTTCCCT-----------TTATGAAG--------ACATATTTTCATAAATCCTGTTTTATTTCAGTTTTACT---ACTTTGTGGTAGATTTCTGCTGCCAACTTACA----CATTACCAA------TGTAACAAAA-------AGTACTCATCTATCTCTTCAGTTGATTTACAGCTGAGTTAATTAAGAAGTACTGGAAGGAAGGGCATAAATATCTGTCATTA-GATCAATC-TATTTA-----------------ACTATCTTGA-------GTTGATGCAGTTATTTT-GTGTTTTTAG--CATC--TACATTCCGTTTTACCGTCCTCAG-------------------------AAATACAGTAAGTTAATAGGAGTCCTGTGGAGGATGCTGTCCCCTGTGAGGACTCTTATAAATGGACCAGGAGAGGGAGATAAGCA-------------------------------------GGAGCTTTGTAAGCAAG-TGAGCTCACCTGCAGTATAGCACATTTATTTTGGATCTCTAGCATGCAGTATCAGTTG--TAGGATGTTGGAAGGACAAAAAGA-----TTTGTGCTTGTGTTTGAGGTTTTCTTATATGTCTTAGTATTCCCTAGACAGCTATGCGTGGGTATGTAACAGAACCTGGAAGTTCACGACTACT-TGTAATTA---------------ATGTCTAATAATAGATAATCT-TGATTCCCTGTAATACATACAATTGTTTACTCGGTTCCAGCTACTGTCAGTGAGCATACAATGCTCTTGGAAGGAACAGCTAATCGCCCTCCACCTACTAGTGGCTCTTCTGGGCCTGTTACTGGTGCTGAGATCATGAGGAAACTGTCCAAGACTCACACTCACAGTGATTCTGTTCTGAAAATAAAGGTA ...x..x...-....:.....x...........:..x..:..:.........:.:.....x..:..:.................:.....:.....x.................:........:......:........x......:x..x.:.:x.:.xx::.:...:..:..:.....:..........---....:..x........:.....:..x.................:.....:..:..........x...x..:xx.:...x.------...:..x.x.x......:::x:.::xx::..:..--.....x:..x...x..------:....x--.....:...::-.....:x....x.-x:.:..xx.:.:.:.x.....-----....::.:...x:.x...----------------------------------.:.:.x...-..x.x.:...x...----....x:.:...x.:x..xx---------------.x...:x.....x:--.....x....xx.-----.::...x:..x.x..:x:..-..:.x:x:...x--..:----.:...:..xx.xx:x.x.x:..::..x.x..:......--x..:....-------.::.:....--------------..x.x...------------..x..x......:..x:..-------..x.:x::...xxx.x:xx:...:::.........-----------..x.:...--------::x.x...x.x.:.xx....:..x..:::::x....:x---......x..------:....xx:..:.:....----::.:.x...------...:x..:..-------...:xx:..x:..:.x.xx.:.xx.:..:..------.xxx.....xxx.:.:::.:--------..x...x.:.:.:..:.-..:.x...-......-----------------:x.:.:....-------:....x:x...x:.:..-.x.x......--...:--..:..xxx::......:xx..:..-------------------------.....-.:.:.....xx....:.xxx..:..xxx.::.::::x:.x.::::.x.:.:.x.xx.:x..x.:::xxx.:.:.:x..:.-------------------------------------.xx:x.:.:.:....:x-..x...:x.:...:x.xx:x::x...x.:...x.:..:--------x.......x...--.:.:..:.xx...:.x.x..x.:.-----.....x.:.-.x:....:::.xxx.x.x.-.xx..:.x:.xxxxx...x.::x..:x:.--:.x...x.x:...:x..:.....x.xx:::.:.-.:...:..---------------....:.x..----..x...x.-....xx:..:.x::x..:x:.x.:x...:xx.x...:....:..x........:..:........x..:..............:..x.........:x...------:.....:.....x.....x........x...........x..:..:.....:..:..:.....:....:x:.:............ 10M1D180M3D80M6D34M2D16M6D6M2D11M1D13M1I21M5I18M34D9M1D14M4D19M15D14M2D13M5D20M1I12M2D3M4D38M2D8M7D9M14D8M12D19M7I35M11D8M8D38M3D9M6I17M4D9M6D10M7D31M6I20M8I17M1D8M1D6M17D10M7D17M1D10M2D4M2D24M25D5M1I80M37D17M1D38M8I12M2D24M5D9M1I19M1I29M2I33M1D8M15D9M4I8M1D101M6I85M 876/1325 66.1% 1382/94230402 0.0% 337/1325 25.4% 83352283 NA +14634 chr4 + 190214555 122262701 122262700 122262988 288 TTGTAGTTATCAGCTGTCATTTTTATATACATAAGAAATAACCCT----------AAGTTACAC----------------------TTTCTGT-----AGGGCATTCACCCATATCATTCTCTGAGCTATACCAGTGGAGACACTGCCACTGATTCTCCAGTGCATGTTGGACGTGCTGGGATGCCAGTAAAGGACAGTCCAAGGAAGGAGAGCCTACTCAGCTACCTGACTGGAAGCTTCCCAAGCCTGCACAACCTCCTGGAAGGTACTCCTCAGAGAAGCAGTGCTGCTGTGAAAAGTAGCTCCCTAACGAGAACAGGTACG chr4 - 94230402 38907410 38907409 38907734 55322669 55322668 55322993 325 TTATAGTTATTGTGTTCCAATCTCATATTCAGAACAAATGCCACTTCCTTTTTACAGTTTACACAATACTTCATTAGTTTCTTTATGTTCTGTCTACAAGGGTATACATCCATATCATTCCTTAAGTTACACCAGTGGAGATACAGCTACGGATTCGCCAGTGCATGTTGGCCGTTCTGGCATGGCAGTCAAGGAAAGTCCAAGAAAAGAGAGTCTGCTCAGCTATCTTACTGGAAGTTTTCCTAGCTTGCATAACCTTCTGGAAGGAACTCCTCAAAGAAGTACAACTGCAGTTAAAAGTAGTTCTTTAACAAGAACAGGTATG ..:.......::xx.x:..x.:.:....x..x..x....:x.x..----------.:x......----------------------x......-----....:..x..:...........::.:..:..:...........:..x..:..x.....x..............x...x....x...x....x.....x........:..:.....:..:........:..x........:..:..x...:....:.....:........x........:.....:.xx:....x..x........:..::....:..........:. 45M10I9M22I7M5I227M 225/288 78.1% 325/94230402 0.0% 37/288 12.8% 83355291 NA +11369 chr4 + 190214555 122263424 122263423 122263606 183 GAAACATTTTATTTT-------CAGGAAATACAGTAGCCACTGATATGTTATCTGAACATCCCTTGCTATCTGAGCCATCATCTGTGAGTTTCTATAATTGGATGTCAAATGCTGTGGGTAATCGAGGAAGTGTGTTACAAGAATCTCCTGTTACAAAATCAGGACACAATAGTCTTCCCACAGGTATTG chr4 - 94230402 38908605 38908604 38908794 55321609 55321608 55321798 190 GAAATCTTCTAATTTATCTGTATAGGAAATACCGTGGCCACAGATATGTTATCTGAACATCCTTTGCTGTCTGAACCATCTTCTGTGAGTTTTTACAACTGGATGTCAAATGCTGTTGGCAACAGAGGGAGTGTAGTACAAGAAAGTCCAGCCACCAAATCTGGCCACAACAGTCTTCCAACAGGTATTG ....:x..:..x...-------:.........x..:.....x....................:.....:.....:.....x...........:..:..:.................x..:..:x....:.....:x........xx...x.::..x.....x..x.....:........x.......... 15M7I168M 151/183 82.5% 190/94230402 0.0% 7/183 3.8% 83354819 NA +13042 chr4 + 190214555 122264238 122264237 122264432 195 ATTTACTCCATTAGGTGTTGCACCCAATCTTCCAACAATACCCTCAGCCTCAGATTTCAACACTGTCTTGTCTAGTGACCAAAATACTTTGGATGGGACACATTCTCAGCATAGCACCAGTCAGGATGATGTGGCAGGTGTAGAAGAAGCAAACCAAGGGTTTCCTGCTGTTCAGCTTGCTGATGCACAGGTGAG chr4 - 94230402 38909810 38909809 38910003 55320400 55320399 55320593 194 ATTTATTTT-TCAGGTGTTGCACCCAATCTTCCTACCATACCCTCTGCTTCAGACTTCAACACAGTTCTGTCTAGTGACCAGAACACCCTGGATGGCACACATTCACAGCACAGCACCAGTCAGGATGACATTGCAGGTGTGGAAGAAGGTAACCAGGGATTTCCTGCTGTCCAGCTAGCGGATGCACAGGTAGG .....:.::-.:.....................x..x........x..:.....:........x..::.............:..:..::.......x........x.....:.................::.x........:.......xx.....:..:...........:.....x..x...........::. 9M1D185M 162/194 83.5% 194/94230402 0.0% 1/194 0.5% 83354428 NA +13840 chr4 + 190214555 122266762 122266761 122267076 315 ATGAATGTT-TATGTCTTTTAGGTTGTTTTCAAGCCTCTTCTGAGTCATACAGGGATCCAGTCACAGGATACAATGCCATTCTGCTACCGAATGTACTTTGGAGAACACCTTTCATTTTCAGGGACTTTGGACTGCCTCAGAGCAGATATTGTGGATTCAGACACAGCCAAAGAGAGAAAAGGCAAAAGAGCAAGAAGGTGTCTT-TTGCATTTTTGTGTATAATTTT----------GTGCAAGAATTATAATACGTTTGTTTTTTAACG---------TTACTTTCGTGTAATCCAAATA----AGGAAGTAATTTTTTT-------TTTTTTTTTTTTTTTTTT chr4 - 94230402 38910480 38910479 38910823 55319580 55319579 55319923 344 ATCAGTGTTGTTTGTTCCGTAGGTTGTTTTCAAACCTCTTCTAAGTTACACAGGGATTCAGTCTCAGGATGCAATGCCACTCTGCTATAGAATGTACTTTGGAGAGTACCTCTCATTCTCAGGAACTTTGGACTGCCTCAGAGCAGATATTGTTGATTCAGATACAGCAAAGGACAGAAAAAGCAAGCGAGCTCGAAGGTATTTTGTTAAATATTTGAAAATACATATACTGGCTAAAGAACAGGAATTAGGAC---TTTAATTTGTAAAGAAGTGAAGTGCAATTTCAAAGCACTTGGATAGAATAAGAAGCAGTTCttttgttgttgtttgttgttttttttttt ..x.:....-.x...:::x..............:........:...:.:........:.....x......:........:.......:x................::....:.....:.....:.............................x........:.....x..:..x......:....:x....xx......:.:..-..:x..x....x:x...xx.x.----------.x:..:......x:.:---...:x...x...x.---------x:.x....:x:xx.:::::...----.:....:.:..:....-------...x..x........... 9M1I195M1I22M10I16M3D14M9I22M4I16M7I18M 240/312 76.9% 344/94230402 0.0% 35/312 11.2% 83356282 NA +56331 chr4 + 190214555 122270991 122270990 122272411 1421 TGTCCTTTTTTTATTTCACGTTTTTAGGCAAGGCCATGTGAATCTTCCTCCACTTGAGTTCAAACCAGCATTAATGTTGGGAACCTTTAGCATCAGTGCTGTTGTAATGGAAAAGTCCGTGTGCACCCCTCAGAACTCTACCAGTGCCCTTTCTTTTCATGATCTCAGCAAGCGGTATTATAACACCTTTCACTGCAACTTTACTATTTCCTGTCAGTCAATAAGCCAGCATGTAGATATGGCTTTGGTTCGTCTTATTCATCAGTTTAGCACAATGATAGATGACATCAAAGCAACTCAGACTGATATTAAACTTAGCAGATATACAGCCGGATCTGCTTCCCCAACACCTACCTTCAAAACCAGAAAACATCGGGACTTTCGTTCATCTGACTTTAGCCGCAGTTCTAGAGGAAGTCTTAATGGTGGCAATAGAGTAAATAATGCAAAGAACAAACGGACCAACAATGAGAATAACAAAAAGGAATCTCGAAACAAGAATTCATTAGGAAGATCTGAAAGAAGAACATCAAAAGTGTCTAGGAAAGGTTCAAAAGATGTGGTGGATCACATGACTATTCATATGGATGACTCTGATTCAATTACAGTGTCAGAACAAAGTGAGCCTTCAGCTGAGTGCTGGCAGAATATGTATAAATTGCTTAACTTCTATTCACTTATCTCCGATCCAACAGGAATATTGGAAAAGTCTTCAGAAACATTTGGACCAGCAGGTAACAGACATTTTTATGTTTTAAAAATTTCCATTTACAATAACAATAATACCAAAGAAGCAGAAGACTGTTCATCATGTTTTCTTAATGTCGTAAGTGGATAATTGAAATGGAGAGAAATTGTCTATCACCAGGGAAATAAAACAGTAATGGAATTCAGATATCCTGCCACCACATTTCCCAACCTTTTAAACTCTTACGTGGTATGTTCTTAAAGGATTTAGACAGACCTGATTTAAAATATCTGGCTCTACTATTCACTTTCAGTAGGAACTTGGAAAAATGTTGAAGAAATTTTTAATCATTTTGTTGGGGATTAGGAGAAAGAGGACTGGTTGGGAATGTGAAGGAAAGAAAGGTAAGACAATGTTTGGAATGTCCTTCCATTTTTCAGTCTTCGTATCTAAAATTGTATATTTTCATTTACTTATAAAGGAGTTCGGAGCCCTACAGAGCCAACATGTAAAGTTGTGTTTGAGAATGAACAAGACAACAGCAGTTTGACTAAGAC--TCAGAGGAAACGTAGCTTGGTAACTTCTGAACCTCAGCATGTTACTCTAATAGTGTTTGGGATTGGCATGGTGAACCGCACACACCTAGAGGCAGATATTGGTGGACTAACAATGGAATCAGAACTGAAGAGGATCCATGGCAGTTTTACTCTTAAGGAAAAAATGAAAGGTATGA chr4 - 94230402 38911310 38911309 38912480 55317923 55317922 55319093 1171 TGTACTTTTTCT--------TTCCTAGACAAGGAGCAGTCAACCTTCCTCCTCTTGAATTCAAACCAGCTTTGATGTTGGAAACTTTCAGTATTAGCGCAGTTGTAATGGAGAAATCCATGTGCACACCTCATAACTCTGCCAATGCCCTTTCTTTTCATGACTTGAATAAACGCTATTATAATACTTTTCACTGTAACTTCACAATATCTTGCCAGTCCATAAGCCAGCACGTAGATATGGCACTGGTTCGTCTTATTCATCAGTTCAGTACAATGGTAGACGATATCAAAGCCACGCAAACAGACATCAAACTTAGCAGATACACAGCTGGTTCTGCCTCTCCAACGCCTACTTTTAAAACCCGAAAACACAGAGACTTCCGCTCCTCCGATTTTAGCCGAAGCTCTCGAGGAAGTCTTAATGGAGGTAACAGAGTGAACAACACTAAGAACAAACGAGCAAACAATGAGAACAATAAAAAAGAGTCTAGAAACAAGAATTCCCTGGGCAGGTCGGAAAGAAGAACTTCTAAAGTGTCCAGGAAAGGCTCAAAAGATGTGGTCG---ACATGACTATTCATATGGATGACTCTGACTCTATTACCGTGTCAGAACAGAGTGAACCTTCTGCTGAGTGTTGGCAAAATATGTATAAACTACTGAACTTCTATTCACTCATTTCTGATCCAACTGGGATTTTAGAAAAGTCTTCTGAAACGTTTGGGCCAACAGGTA--AGCCAGTTTT---------------------------------------------------ACTATTGTCCCTATT------GTGTCTTGGGT------TTGGTTTGGGTGCCAGT--TTTATCA------AAATGGAGTA--AGTGGGGCTCAGATGATTTGCC-------------------TAA---------------------AAATGTGTAAGACA------------------------TACTATC---------------CTTGG-----TTTCGAACACAATGTATATCA-------------------------GATACGCTAAGGATTT----------------------CTTCTAAATTATCCTTAAGTAACTCAGTA-----------------GTATTTTTGT----------AGGTGTTCGAAGCCCAACTGAACCTGCTTGCAGAGTGGTGTTTGAGAATGAACAGGATAATGGCAG--------AGACGTGCAGAGGAAGCGCAGTCTGGTGACTTCGGAGCCACAGCATGTGACTCTCATAGTCTTTGGGATAGGCATGGTGAATCGAACCCACCTGGAGGCAGATATTGGTGGTCTGACGATGGAATCAGAGCTGAAGAGAATCCATGGCAGTTTCACTTTGAAAGAAAAAATGAAAGGTGTGA ...x......:.--------..::...:.....xxxx..x..:........x.....:...........x..:.......:...:..:..:..:..:..x...........:..:...:.......x.....x......:...:..................::.x.::..:..x........:..:........:.....:..x..x..:..:.....x...........:...........x:......................:..:......:....:..:........x..x..:..x..:..:..............:.....:..x.....:..:.....:.....:..:......x.......:x.:.....:..:..x..:..:........x..:...x................x..:..:.....:..:..::.x...........::.x...........:..:.....:..:...x.............x:.:..x..:..x...........x..x........:........:..............x.---............................:..x.....x...........:.....:.....x........:.....:............:.:..x..............:..:..:........x..:..x..:...........x.....:.....:...:......--..x..x....---------------------------------------------------...:..xx:.x.:..------:....x.::..------...:xx...:x:xx.:.--.:.....------....::.::.--.:...:::......:x::....-------------------...---------------------...x.xx.x.....------------------------......:---------------.....-----.x.:...x.x.x.x.xx....-------------------------..:xx.:.::.:..x.----------------------:x.:.::.x.:.....xx:.xx:.....x-----------------:......::.----------...x.....:.....x..x..:..x:.x..:.:...x.................:..:..::....--------....--x........:..:..::....:.....x..:..x........x.....x.....x........x...........:..x..x.....:.................x..:..:...........:........:..............:...:.x..:...............:... 12M8D546M3D168M2D10M51D15M6D11M6D17M2D7M6D10M2D22M19D3M21D14M24D7M15D5M5D21M25D16M22D29M17D10M10D66M8D4M2I176M 927/1169 79.3% 1171/94230402 0.0% 254/1169 21.7% 83359681 NA +7439 chr4 + 190214555 122274323 122274322 122274445 123 TATTTTTTCTCATATTTAAGATGTTTTACATCAAAAGATGACTGAGACTTGTGCTACTGCTCATATTGGTGGGGTTAATATTGTGCTGCTTGAAGGGATTACACCAAATATACAGTAAGTATG chr4 - 94230402 38912899 38912898 38913016 55317387 55317386 55317504 118 TATTTTTTCTTA-----AAGATGTACTACATCAAAAGATGACGGAGACATGTGCCACTGCTCACATAGGAGGTGTCAATATCGTCCTGCTGGAGGGAATTACCCCAAATATTCAGTAAGTATG ..........:.-----.......x:................x.....x.....:........:..x..x..x..:.....:..x.....x..:..:.....x........x........... 12M5D106M 100/118 84.7% 118/94230402 0.0% 5/118 4.2% 83361424 NA +10767 chr4 + 190214555 122275759 122275758 122276068 310 TCGTAGTGTATTCTTTGGTATTTCATTTTCA----ATTGCAATGAAGAGGAAATGGAA----TGGAAAAAAATGGTTCAAATGGTACTTTAAAGGAACATTTTAAGAGTGGGAAATTAGAAA-------------AGCTTTCCAGATGATTGGTCATATTGTA-------------------ACTAATTTGTGCATGAATGTTTATT-------TGCCTCCTTTTTGTTTTCCC-ACTTTCTCTTGACTCTTCATCTGTAGACTGGAGGATTTTCCTACATCTCCTACAAGTACAGCCAAACAAGAGTTTCTGTATGTCATATTATTCTTTTTCATGGCTTTGTAATT-ACTGTAGTAT chr4 - 94230402 38914255 38914254 38914607 55315796 55315795 55316148 353 TCTTTGTGTCTTTTTTTATGCCACAATCTTACAGAACTTTAATACAGAAATGGTGGAAAAAGGGGGAAAAGGTTGACTAAAT----CTTTGAAAAAACAAGAAAAAACTAACAAACCCCAAACCTTAAAGGTATTAACTTTGAAAGTAAATG-TCATATTGTGGGTTACAAATAATTAACTGACTAATTT-TGCATGAATGTTTATTCTTTATTTGCTTTGTTTTTGTTTTTCTTGCTTTCTCTTCAATCTTCATCTATAGACTGGAGGATTTTCCTACATCTCCTACAAGCACAGCCAAACAAGAGTTTCTGTATGTCATATTATTATGTTTAATAGTCTTGCAACTAACTGTGTTAT ..x.x....x..:...x:.:::x..x.:.:.----.:.x:...:x...::x::.....----x..:....::.x.x::....----....:..::....xxxx..:.x.::x...::xx...-------------.:....xx.::.:.x..-.........:-------------------........-................-------...:.:x..........:.:-:.........x.x.........:.................................:...................................x.x...x..:.::...:..:.-.....:x... 31M4I23M4I20M4D36M13I17M1D10M19I8M1D16M7I20M1I113M1I10M 229/304 75.3% 353/94230402 0.0% 55/304 18.1% 83361504 NA +15817 chr4 + 190214555 122279759 122279758 122279987 229 CTTTCTCTATTGATAGAACTGTAGTGAAATGTAGTATTGCCAAGTCCCAAGCCCTCTACAGTGCCCAAAGAGGGCTGAAGACAAACAATGCTGCTGTGTTCAAAGTAGGAGCTATCAGTATCAACATTCCTCAGCACCCTGCCACCTTACATAGCATGATGGTTCGAAGTTCTCACCAACTATCTAAACAAATCTCAGACCTAATCAGACAGCCTTCTACAGCGTAAGT chr4 - 94230402 38917202 38917201 38917425 55312978 55312977 55313201 224 CTTTCTCT-----TAGAACTGTAGTGAAATGCAGTATTGCCAAATCCCAAGCCTTGTATAGTGCCCAGAGAGGGCTGAAAACAAACAATGCTGCTGTGGTCAAAGTTGGAGCCATCAGCATCAACATTCCGCAGCACCCTGCCACGCTGCACAGCATGATGGTGCGCAGCTCTCACCAGCTCTCCAAGCAGATTTCAGATCTCATCAGGCAGCCATCAACTGCGTAAGT ........-----..................:...........:.........:.x..:........:...........:..................x.......x.....:.....:...........x..............x:.:..:...........x..x..:........:..x..:..:..:..:.....:..x.....:.....x..x..x........ 8M5D216M 193/224 86.2% 224/94230402 0.0% 5/224 2.2% 83362557 NA +18625 chr4 + 190214555 122281504 122281503 122281789 286 TATTTTTTAATTATTTTTTTTTTGCTTTCTAGCCCACAGCCTGTAAAAGAAGATATTGCAACCCCACTACCTTCTGAAAAAACCCCAACAAGTGTTAATCAAACTCCTGTTGAAACAAATGAATTTCCTCAGCTACCAGAAGGCTTAGAAAAGAAGCCTATTGTTCTTAAATTCAGTGCCATGTTAGATGGTATAGCCATTGGAGCAGCACTTTTACCATCTCTGAAAGCAGAATACAAGATGGGAAGAATGAGAAGTCATGGAATGACAGGTAATATTGAATTCT chr4 - 94230402 38917524 38917523 38917801 55312602 55312601 55312879 278 TATTTTCTGATC---TTTGTTGTGTATAC-AGCTCTCAGCCCACAAAAGAAGATGTCGCGACTCCTTTGCCCTCTGAAAAGACTCCAACAAGTATTAATCAAACGCCTGTTGAAACAAATGAATTTCCACAGCTGCCAGAAGGCTTAGAAAAGAAGCCTATAGTTCTTAAATTCAGTGCCATGATAGATGGTATAGCTATTGGAGCAGCACTCTTGCCCTCTTTAAAGGCGGAATATAAGATGGGAAGAATGCGGAGTCATGGAATGACAGGTAA----GAGTTCT ......:.:..:---...x..x..:x.x.-...:.x.....:::..........:.:..:..:..x:.:..:........:..:.........:..........x.......................x.....:..........................x.....................x.............:..............:..:..x...:.:..:..:.....:...............x.:....................----..:.... 12M3D14M1D245M4D7M 237/278 85.3% 278/94230402 0.0% 8/278 2.9% 83363980 NA +18365 chr4 + 190214555 122286518 122286517 122286791 274 ATAACTTTTCTCATTTC----TTACAGGTGCACAGACAAGATTTACATTTGAGCTGCCAAATCACAGATTGCGTTTTACTTCAAAAGTTTCTGCCACAGATATGTCAACCATTCCTCCTTCTGCCAGTCTTAACCTTCCCCCTGTTACCATGTCAGGGAAATATATAATGGAAGAACATGATAGTTATTCGGATCAGGTGTGGAGTATAGATGAACTGCCTTCTAAACAAGGTTACTATTTACAGGGAAATTATCTGCGTTGTGTGGCAGAAGTAAGT chr4 - 94230402 38918310 38918309 38918587 55311816 55311815 55312093 278 ATATTTTTCCCCATTTTCCTTTAACAGGTGCCCAGACAAGATTTAATTTTGAGCTTCCAAGTCATAGATTGCGCTTCACTTCTAAAGTTTCTGCCACTGATATGTCAACCATTCCTCCTTCTGCAAGTCTCAACCTTCCTCCTGTCACTATGTCGGGCAAATATATCATGGAAGAACACGATACTTACTCAGACCAAATATGGAGCATAGATGAACTGCCTGCTAAACAAGGCTATTACCTACAAGGGAACTACTTACGTTGTGTGGCTGAAGTAGGT ...x:...:.:.....:----.x........x.............xx........x....:...:........:..:.....x..............x..........................x.....:........:.....:..:.....:..x........x...........:....x...:..:..:..::.:.....:...............x..........:..:..::....:..:..:..::.:...........x......:.. 17M4I257M 228/274 83.2% 278/94230402 0.0% 4/274 1.5% 83368208 NA +8879 chr4 + 190214555 122289083 122289082 122289197 115 GCAGGTTGGTTCCTTTGAACATAATCTTACAACTGATCTTCTAAACCACTTGGTATTTGTACAGAAAGTGTTCATGAAGGAAGTTAATGAAGTAATACAAAAAGTTTCTGGTAAG chr4 - 94230402 38919244 38919243 38919358 55311045 55311044 55311159 115 GTAGGTTGGTTCCTTTGAACATAATCTCACAACTGATCTCTTGAATCATCTAGTATTTGTACAAAAAGTGTTCATGAAGGAAGTCAATGAAGTCATACAGAAAGTTTCAGGTAAG .:.........................:...........::.:..:..::.:...........:....................:........x.....:........x...... 115M 101/115 87.8% 115/94230402 0.0% 0/115 0.0% 83369839 NA +3518 chr4 + 190214555 122300097 122300096 122300155 59 CTCCTGGGTTCAAGTGATTCTCCTGCCACAGCCTCTCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.............x...x.xx.x.x......:..:.........:.:....x.... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 104102958 86111597 +6544 chr4 + 190214555 122301297 122301296 122301417 121 TAGGTGGGGAGCAGCCTATTCCTCTCTGGAACGAACATGATGGAACAGCAGATGGAGATAAACCTAAAATTCTCCTCTATTCCCTAAACTTGCAGTTCAAGGTAACATAAATATAATGATA chr4 - 94230402 38922190 38922189 38922307 55308096 55308095 55308213 118 TAGGAGGTGAGCAGCCAATACCTCTTTGGAATGAACATGATGGCACAAGTGATGGAGAAAAGCCAAAAATTCTTCTTTACTCACTGAGCCTACAGTTTAAGGTAATTT---TACAATGATA ....x..x........x..x.....:.....:...........x...:xx........x..:..x........:..:..:..x..:.:.:.:.....:.......:x.---..:....... 108M3D10M 93/118 78.8% 118/94230402 0.0% 3/118 2.5% 83379107 NA +13540 chr4 + 190214555 122304789 122304788 122304991 203 ATCTGCTAGGGTATTCAAGTAACGGCCACTACTCCATCAATGAGAGCTGTAAGATTTGAAACTGGATTGATTGAACTGGAACTTTCTAACCGACTTCAAACCAAAGCTTCACCAGGAAGTAGCAGCTATCTGAAACTGTTTGGCAAATGCCAGGTGGATTTAAATCTGGCATTAGGACAAATTGTCAAACATCAGGTGAGTAC chr4 - 94230402 38922568 38922567 38922770 55307633 55307632 55307835 203 ATTCATTAGGGAATTCAAGTGACAGCTACAACACCCTCGATGCGAGCTGTGAGATTTGAAACTGGATTGATAGAACTTGAACTCTCAAACAGACTTCAAACCAAAGCGATGCCTGGAAGTAGCAGCTACCTCAAACTCTTTGGGAAATGCCAGGTGGATTTAAATCTGGCACTAGGACAGATTGTTAAACATCAGGTTGGTGC ..::::.....x........:..:..:..x..x..x..:...x.......:....................x.....x.....:..x...x................xx::..x..............:..x.....x.....x...........................:.......:.....:...........x:..:. 203M 169/203 83.3% 203/94230402 0.0% 0/203 0.0% 83382221 NA +14332 chr4 + 190214555 122305871 122305870 122306067 197 TTTTAGGTTTATGAGGAAGCTGGTTCTGATTTTCATCAAGTTGCCTATTTTAAAACCAGAATTGGATTAAGAAATGCCCTCCGAGAAGAAATCAGTGGTTCTTCAGATAGGGAAGCTGTGCTTATTACTTTGAATAGACCAATTGTTTATGCACAGCCTGTGGCCTTTGATAGAGGTAAGATAAAGTCAATCACTAC chr4 - 94230402 38923206 38923205 38923402 55307001 55307000 55307197 197 TCTAAGGTTTATGAAGAAGCTGGCTCAGACTTTCATCAAGTCGCCTATTTTAAGACAAGAATTGGATTAAGAAATGCTCTCCGAGAAGAAATCAGTGGCTCATCGGATAGAGAAGCTGTCCTTATTACTTTGAACAGACCAATTGTTTTTGCTCAGCCTGTGGCCTTTGACAGAGGTATGGAAGAGACAATTGCTGC .:.x..........:........:..x..:...........:...........:..x....................:....................:..x..:.....:........x..............:.............x...x.................:.......x.:x.:..x....::..:. 197M 170/197 86.3% 197/94230402 0.0% 0/197 0.0% 83382665 NA +15793 chr4 + 190214555 122307945 122307944 122308171 227 AAAGCTGTGCTGTTTTGGCTGAATTATAAGGCCGCCTATGACAACTGGAATGAACAACGAATGGCTTTACATAAGGATATTCATATGGCTACAAAGGAAGTAGTAGATATGCTACCTGGTATCCAGCAAACATCAGCCCAGGCCTTTGGGACTCTTTTTCTCCAGCTCACTGTCAATGATCTGGGAATTTGCCTACCTATCACAAATACTGCACAGGTACAAAAAGT chr4 - 94230402 38923866 38923865 38924092 55306311 55306310 55306537 227 AAAGCTGTGCTATTTTGGCTGAATTACAAGGCTGCATATGACAACTGGAATGAGCAGAGAATGGCTTTGCATAAAGATATTCATATGGCCACAAAAGAAGTAGTAGACATGCTGCCTGGAATCCAGCAAACCTCTGCGCAGGCTTTTGGGACTCTGTTTCTTCAGCTGACTGTAAACGACTTAGGAATTTGCCTGCCCATCACAAACACACCTCAGGTAATCAAAGT ...........:..............:.....:..x.................:..:x..........:.....:..............:.....:...........:.....:.....x...........x..x..x.....:...........x.....:.....x.....x..:..::.:...........:..:........:..xx.x......xxx..... 227M 192/227 84.6% 227/94230402 0.0% 0/227 0.0% 83384079 NA +14465 chr4 + 190214555 122309232 122309231 122309471 240 TTTTGTCTTATTTCTTCTTTAATATATTTTGCAGTCTAATCATACTGGAGACCTTGACACTGGTTCTGCTTTGGTATTAACCATTGAAAGTACTCTCATCACTGCATGCTCTTCAGAGTCTCTGGTTAGCAAAGGGCATTTCAAAAACTTTTGTATCCGTTTTGCTGATGGATTTGAGACATCATGGGATGACTGGAAACCAGAAATTCATGGGGATTTAGTGATGAATGCCTGTGAGTA chr4 - 94230402 38926052 38926051 38926291 55304112 55304111 55304351 240 TTTTGAGTAAATTCTCTTCTATATTATTTTCCAGTCTAACCATACTGCTGATCTTGACACTGGCTCTGCTTTAGTCCTGACCATCGAGAGCACGTTAATCACTGCCTGCTCCTCAGAGTCCTTAGTTAGCAAAGGTCACTTTAAAAACTTCTGTATCCGCTTTGCTGATGGCTTTGAGACAAGTTGGGATGACTGGAAACCAGAAATCAGAGGAGATCTAGTCATGAATGCATGTAAGTA .....xx.x.x....::.:..xxx......x........:.......xx..:...........:........:..x:.:.....:..:..:..x:.x........x.....:........::.:...........x..:..:........:........:...........x.........xxx.......................:x:x..:...:....x........x...:.... 240M 191/240 79.6% 240/94230402 0.0% 0/240 0.0% 83383180 NA +4859 chr4 + 190214555 122313613 122313612 122313690 78 GTGATTTTTGTACAGGTGTAGTTCCAGATGGCACCTATGAAGTATGTTCAAGAACTACAGGACAAGCAGCAGCTGGTA chr4 - 94230402 38926838 38926837 38926915 55303488 55303487 55303565 78 GTGCTTTATATGTAGGTGTTGTGCCAGATGGTACATATGAAGTATGTTCTAGGACAACAGGACAAGCTGCAGCAGGTA ...x...x.:.::......x..x........:..x..............x..:..x...........x.....x.... 78M 64/78 82.1% 78/94230402 0.0% 0/78 0.0% 83386775 NA +32634 chr4 + 190214555 122315437 122315436 122316887 1451 AAATGCAACTTCTTTATTTAAA-----CAGAAAGCAGTAGTGCTGGAACCTGGACACTCAACGTATTGTGGAAAATGTGTGGGATTGATGTTCACATGGATCCTAACATTGGCAAAAGGCTTAATGCTCTGGGCAATACTCTTACAACACTGACAGGAGAGGAAGACATAGATGACATTGCTGACTTAAATTCAGTGAACATAGCTGACCTGTCAGATGAGGATGAAGTTGATACTATGTCTCCCACTATCCATACTGTAAGTAAACT---CACTGTTAGAATTTTTCAGGATTG----------------GCTTTTACCCTGAGACAGGGATATTTTTTGTTCAGTGTTATTTAGTATATTATAGTTGCTATTTGTGGAGGAAGAGAAGGGAATGGTGGTTCACTGTGTCTACATTTCATAATACTGTCTTTTAATCGAGT---------TCTGTGCTACATGTTGACTGTCATCCAACTTGTGCTTTAACCTATAGGTAAAAT----AATAATATTAAAACTGAAATGAGTAGGGAGTGGGGCAGGGTGGGGAATGGGAAGAAATTGCTAACAGGTATGAGGTTTCTGAGTGATGAAAATATTCCCAACTAAGATTTTAATGATGGTTGTACAACTTTGTGAATATACTAAATGGGTGAGTTTTATGGTACGTGAGTTATATCTCAATAAAGATGTTCAAGATGAATTTCAAAGCAAAGTGCATATACAAAATGAAATGATACATTTTAAAAATACGTATTTTCATCTA--TACTATACACTCTGTAGTTTCAAGTTATTTTGTGGCAAAAAGAAACTTATTCTTTGATTTC----------ATTCTGGTA-TTGATTTTTAAAAATTATTTTCAATATCTTTTAACTATTATACCATGAAATAGTTTTGTTCTTGGGAAGAAATTTTTTTAAATTTAATATTACTGTTTATTACTTAGAGTTCAGATGGAAGTTCAATAAGTGGAGATGGCCACAAACTCACCTTTGGGCAGCGACTTGTAAATCACCTACTAGGCCTGACACCCCCAAATCAGCGCCATTCTGTTCCTGCAGAGTATCTGTGTGACCCAGAGATGTGGGGCTCCCCTCAGTCTAGCCAGTCCCATTTGAAAGCATGCAGAGCACACTCATGGGGAAACGTAGGTAGCAACTAAATAGATTCCTTATGAAATTGAAGGGATTTAAATCAATGG-AGAATTCCAA-------CCTTAATATAGATGGTTTTGATTC--TTGCATGCTTTGA-------TTTAAGGTGTTAA---------TTTTGTGATAGTATA--GATTTGCTGTGTGACTTGAGGGTGGTATTGACAGATACACTTTTGACTTTT---CAGGAAGCCACAGATTATCGAAGACAGGCAGCATCTGCTAGCCAGCCGGGAGAACTTAGAGGAAGAAAAATTATGAAGCGTATAGTGGATATCAGAGAACTGAATGAACAGGCCAAAGTAATAGATGATCTGAAGTATGTACAATGATTTTTAATTTAA chr4 - 94230402 38927646 38927645 38928976 55301427 55301426 55302757 1331 AAACATACCTTTTTCTTTTAATAAATTCAGAAAGTAGTAGTGCTGGAACCTGGACACTGAATGTATTATGGAAGATGTGTGGTATCGATGTTCATATGGATCCAAACATTGGGAAAAGACTGAATGCTTTAGGCAACACCCTCACAACACTGACAGGAGAAGAAGATATTGATGATATTGCTGACCTCAACTCTGTAAACATAGCTGACTTGTCAGATGAGGATGAAGTTGACACTATGTCTCCTACTATACATGCAGTAAGTGAATCAAGCACAATGCGTATTATT---GATTGCAGTGAGCTTGATCAAGTTTTCAGTC---AAAAGGAAAAGTCTTAGTCTTGAGTTTTTTGA---GTTCAACTTGCTA--------------------------GTCTCATAGCTTGTATGATTCATG--------TTTCAAACAAACAAACAAAAATCTGT--TAGTTTTCTAATGCCA---------TATTTCAA---ACACGAGAAGTCACAGATCATATTTCCACTGGTGTTATCTAGAATTTGAAT----TTGGAAACATGGAG-ATCTGATAACTAACTTCAGGTGCCTGAAC--TGAAAA-------------------------AGCTGTA---------------GCTATATATATGTTTTC-------------TTAGATTTTCTTATAGATGTGTAGAGTATATTACTAA--------CACATACCAAAAAAAGT------TTCT-----TTCATTTGTTTATCTACCTACTAT-----------------GCTACT-------------AATCTTGTTTTTCAATTTCACATGAAACTATTTTAATAGGTGTTCTTTAATGGCTATCTTAAATGTCTCTTGCCTGCCAC-CAGTGA---AGATTTCATCTCAG--------------AACACTAATGTTCCTGTTTGTTGTTTAGAAATCAGGTGGAGGTTCATTTTATGGAGATGCACGCAAGCTAACATTTGGGCAGCGGATTGTAAATCACCTGCTGGGTTTGAGTCCCACAAACCAACGATACTCTGTTCCTGTAGAATATCTGTTGGGGTCAGCGAAGTGTGATTCTCTTCAGTCTAGCAGATCACATATGAAAGCAGGCAGATCCTGCTCATGGGGACATGTATGTAGTAGCTAAATTGTGTCTAACTGAA--TGATGGGGTTTGGATCACTGGAAGAGTTCCAATCGGCTGCCTT--TTGAGTTGAAAGTGATTCTTTTGCATGCTCTAGTCCAAATTTTAAGGTGTGAAATTCACTTTTTTTGTTAAATCATACTCACGTCCAGTTT---TTGATGAGGGCATT----GATACGTCTTTA--TTTTAAATAGGAAATTGTTGATCACCGGCGGCAGGGAGCTTCTAGTATTCAAACTGGAGAACAGCGAGGAAGAAAATTTGTGAAACGTTTAGTTGATATCAGAGAACTCAATGAGCAAGCTAAAGTTATTGATGACTTAAAGTAAGT----TGGATTTTGCTTTAA ...:::.x...:..:x.....x-----.......:.......................x..:.....:.....:........x..:........:........x........x.....:..x......:.:.....:..:..:.................:.....:..x.....:.........:.x..:..x..:............:......................:...........:.....x...:.x......:..::---...x:.xx.x...x..---.....----------------.:...:.x:.---:.x...:.x.x.:..x..::x.x...x...::---:..xx.x......--------------------------.x:...:x.:x.x..::x.....:--------...:..x.:.::---------.....--..xx.x.:x.x..:..---------.::..:..---.:.x.x:..:.----:..x.....xxx....:x:.x.x:x:.:.x.x.:::----.x..:..::x.:..-.x:..x....x:::x.x....x:....::--......-------------------------:.:....---------------:...x..:x:..xx..:-------------...x..:.:xx..x......x:.:::.:x...x.x..--------..:....x...x:..:.------..:.-----.x.:.x.x..:.....--......-----------------.:..:.-------------..x...:..:..::.....----------...:.::..-x..x.:.....x:::...:..x...:...:..:x..:::.:-.x:...---..x...xx...::.--------------..xx:....:..x......:..::.....:x....:....:.....x.xx:........xx.:...:..x..x...........:x.............:..:..::...xx...x....:..:..x:.:..........:...:.......xx.:x:...x..x...x.::..:.:..........x::..x...x........x.....x.x::..........x.:...x....:.:......x.xx..:xxx....--...x...:...::....x...-...:......-------....--.xx..x..:xxx......--.........:.::-------..........x..---------......x.x.x:...--x.:x.x.x..x.---....x.:x..:...----.....:::...:--....---:.....:::::x...:.:..:x.:....x...x...:x..x:..:x.x.......xxx...........x..:....:...x....x..............x.....:..:..:.....x..x.....::.:.....x..----..:x....:x..... 22M5I241M3I16M3D5M16I10M3D32M3D13M26D24M8D12M9I5M2D16M9D8M3D11M4I36M4D14M1D29M2D6M25D7M15D17M13D37M8D17M6D4M5D16M2I6M17D6M13D19M10I9M1I41M1D6M3D14M14D260M2D21M1I10M7I4M2D18M2I13M7I13M9I15M2I12M3D14M4D12M2D4M3I140M4D15M 890/1250 71.2% 1331/94230402 0.0% 282/1250 22.6% 83387791 NA +8835 chr4 + 190214555 122318136 122318135 122318275 140 TTTGCATCCAGAAAATTAGGTGCAAGTGAAGGAACCATAAACCAGGAAATTCAACGTTACCAACAGTTAGAATCTGTGGCTGTGAATGACATTAGAAGAGATGTTCGTAAAAAATTACGGAGGTCCAGTATGCGGGTGAG chr4 - 94230402 38930290 38930289 38930429 55299974 55299973 55300113 140 TTTTTCTCCAGAAAATTAGGTGCAAGTGAAGGAACAATAAATCAAGAAATTCAGCGCTATCAGCAGCTGGAGTCAGTGGCTGTCAATGATATCCGCCGAGATGTTCGAAAAAAGCTACGTCGATCCAGTATGAGGGTGAG ...x:x.............................x.....:..:........:..:..:..:...:.:..:..x........x.....:..:x.xx..........x.....::....xx.:.........x....... 140M 113/140 80.7% 140/94230402 0.0% 0/140 0.0% 83387846 NA +3078 chr4 + 190214555 122319499 122319498 122319597 99 ATTCCACTGTGGTCTAAGAGCAG----ACATTTTATGATTTATAATTTTTTTTTTTTTTTTTTTTGACACAGAGTCTCGCTCTGTTGCCCAGATTGGAGTGAA chr4 - 94230402 13242974 13242973 13243076 80987327 80987326 80987429 103 ATCTCTCTGCAGCTGAGGGTCAGTATAAAATTTCCTGATTTATAACTTTTTTTTTTTTTTTTCCTGTTCTGTAGTTTTACTCCATAGTTTTGCTTGAAAAGAA ..::.x...::.::x.:.:x...----.x....:x..........:................::..x:x::x...:.::...::.x.:::x.x...:.:x... 23M4I76M 62/99 62.6% 103/94230402 0.0% 4/99 4.0% 109076525 81138030 +3785 chr4 + 190214555 122321511 122321510 122321564 54 AAATGTGTGCATGTGTATATATGTGTGTGTATATATACACACACTCACACACAT chr4 - 94230402 25393257 25393256 25393310 68837093 68837092 68837146 54 AAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGT ..................:.....:.x...:.:..:........x.:.....:. 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 96928254 93286301 +7987 chr4 + 190214555 122324418 122324417 122324540 123 TTTTG--TTAGGCTGCTTCCCTAAAGGATAAGTGGGGTTTGAGTTACAAACCAAGTTACAGCCGATCAAAAAGCATTTCTGCTTCTGGAAGACCACCTCTTAAGCGAATGGAAAGGGCAAGGTAA chr4 - 94230402 38931401 38931400 38931525 55298878 55298877 55299002 125 TTTTGGTTTAGGCTGCTTCCTTGAAAGACAAATGGGGTCTCAGCTACAAACCTAGCTACAGCCGATCAAAGAGTATTTCAGCATCAGGAAGACCACCTCTGAAGAGAATGGACAGAACAAGGTAA .....--.............:.:..:..:..:......:.x..:........x..:..............:..:.....x..x..x..............x...x.......x..::........ 5M2I118M 103/123 83.7% 125/94230402 0.0% 2/123 1.6% 83393017 NA +9069 chr4 + 190214555 122325213 122325212 122325958 746 TTTATATTTACTTGCAGTTCTCGAGTAGGAGAAACTGAAGAGCTCCCAGAAATCCGTGTGGATGCAGCATCTCCTGGACCTAGAGTAACTTTTAATATCCAGGATACAGTAAGAGATATAT--AATTTGTTAGAGATATACATTGCTAAGTAGTT-TTTACAAATT-ACAAAATTATGGTAT---TATACTATTTCAAAATACTGATTTCTTACTATAAT------CAAAGTATGGA--TTGTGATGACTGAACTGTGCATATTACCAAGTAG-TGGGCACTGCCCTTATAACATTTTCTGAGAGCCATGAAGCAGG-----TGTTAGTATTTTACATTTTACATGCACAATAAAGGCTCCATAACTGCTTTCTCTTAAGTAGAAAGGTTTTTGTTGAATAAT------TTTTCTTTCAAGTGAGAATCCATATTAAACTACATCTTACACAAATGTAAACGTGGAATATTGATACTCATTTATGTATTTTATTTATAGATAGCAG-AAATTAGAAGGAAGAAGATCAGCTTCAAAGTTGTATTCTA--ATTTCATAGCATATTAAA-----------------------------CATTATATT-----------AAAATGTTTATTTTGTTTTTTGTGTATTTACTTTTAAGTCATTGTTATTTTTCATGAGTTTTTTTTTTTTTTACTTTTCTCATTATTTTAATTAAGTTGAAAAATACAGTATGGGGAAGTACACCACAATCCAGCTGTCCTGGGGAAGGGTATTTTCAGGTACTTACTAAGAACAATATAAATTTTGCTTTAAAACTAAT chr4 - 94230402 38933572 38933571 38934309 55296094 55296093 55296831 738 TTTGTTTTTGTTAATAGTTCTCGACTAGGAGACAGTGAAGATCTCCCAGATATCCGGGTAGATGCTGCATCTCCTGGGCCAAGAGTAACTTTCAACATACAAGATTCTGTAAGAATTACTTTATATTCTTTAGCATCGTATGTCTCATACCATTTGGTCACAAGTTCACCAGAT--GGGTATGCCTAGGCAGACCTGAGTTGCTGATACGTTTCTTTTGTGTGCCACACATTATTGATGTTTGGAACACAGGTTTGTTC-TGACATAAGATAGATAGGTTTTGAGTTCCTAACAT--------AGCAATTAATTGAGTATAATATTAGAATTAT---TTTGGTGTGCTT----------------TTTTTTTTTTTTAGGCTGA----------CTTAATAATAATACAGTTCTTTTGATGTGTGCAAAAATCACAAAAATCATCTTGC-----------------CTGTTAACACCCTTAGAC---TTTTAGAAATGGACATTAGTAAGTTTGCTGTAGCCCTATCATTTCTA---TTGTGTTCTATCATTTT---GTGTGTTGAAAACCGGTTGGTTTGGGTTTTTTTTTCAGTCACTATGTTTTCTCATTTTAAAAATGTTTGTGTTGTTTTTTTTTTTCATG-GCTGAAATTACTGTAATTGTT--TTAATTTTTCTTTTT-----CTTTTTCAT--TTCTAATTAAGTTGAATAAAACGGTTTTGGGGATTGCACAACAATCCAGCTGTCCAGGGGAAGGGTATTTTCAGGTATTT-CTGAGAAGAA-ACAGTCTTTGCCAGAGAACTAAT ...:.x...::.x::.........x.......x.x......x........x.....x..:.....x...........:..x...........:..:..x..:...x.x......:x..:x.--x...:x....x:x::..::.:x.xx.x:.x..-x.:....:..-..x.:..--x.....---..x:.x:x::::.:x.:.....x:x..x..x.x:.------..x.x...x..--..xx..xx..x.:x:...x.-.:x:.:x.::...-.:..:x:..xx:.:x......--------...x..x..x:::.-----.:....x...x.---...x:::...x:----------------:.x:...:.:...:.:x..----------:.x......------x..::...x.x...x.x.xxx..xx:...xxx......:.-----------------x.:..:.:..:.x.xx.:---.....xxx..:..:.x:..-..:..x.xx.x.:xxxx....x:.::.---....:.....--....:---.::.:..:..-----------------------------..:...:..-----------.........:.x.........x.x.x:x.:-x:.x..:.:.:...x...x..--.x.:.....:.....-----:...:....--..:.............x..x..:..x.x...:.x.:...x...............x.....................:..-..:....x..-.:.:x:.....:xx.:....... 121M2I32M1I10M1I7M2D6M3I35M6I11M2I20M1D13M1I21M8D14M5I12M3D12M16D19M10D9M6I40M17D18M3D19M1I27M3D10M2I5M3D10M29I9M11I30M1D21M2D15M5D9M2D80M1D10M1D23M 448/668 67.1% 738/94230402 0.0% 148/668 22.2% 83391641 NA +17076 chr4 + 190214555 122328054 122328053 122328454 401 TTTTTAATTGAAATATG------AATCTGATTCATGTTTTTT-CTTTTTACAATCAGTTTCCAGAGGAGACAGAACTGGACCTTTTGTCAGTAACCATTGAAGGTCCATCCCATTATTCATCAAATAGTGAAGGATCATGTTCTGTGTTCAGTTCTCCCAAAACTCCAGGAGGCTTTTCACCAGGCATTCCTTTCCAAACTGAAGAGGGCCGACGGGATGACAGTTTGTCTTCTACCAGTGAAGATTCCGAGAAGGATGAAAAAGATGAAGACCATGAGAGGGAAAGGTTTTATATTTACAGGAAACCCTCGTGAGTAACCTTATTTTAAGATCATAATGTAGTATTTCAGAATCTAGAAATGAGCACAAAATGTTATATATAACTCAGCTTTTACAAAAAACATTTT chr4 - 94230402 38935705 38935704 38936088 55294315 55294314 55294698 384 TTCTTGATTGAAATATCTCTATCAATTTAATATGTATTTTTTTCTTTTTACAATCAGTTTCCGGAGGAGACAGAAATGGACCTTTTGTCTGTAATTATTGATGGTCCCTCCCATTACTCATCTCCTAGTGAAGGCTCATGCTCAGTATTTGGTTCACCTAAAACTCCAGCAGTCTTCTCACCTGGCATTCCCTTCCAGCCTGAAGAAGGACGTCGGGACGACAGCTTATCATCAAGCAGTGAAGATTCCGAGAAGG------AAGAT---GATCATGAACGAGAGAGAACGTATTTTTATAGGAAACCACCGTAAGTAA---TAGTCCCAAGGAAGAACACAGAAATAAAGA------AAATGCATTTGAAATATTGACTTTAAGTC------TACAAAAAATCTTTT ..:..:..........x------...:.:..x::.:......-...................:............x.............x....::.....x.....x........:.....xxx.........x.....:..x..:..::....x..:..........x..x...:.....x........:.....:x.......:..x..x.....:.....:..:..x..x.x....................------.....---..:.....:x.:..:..:x:x...x....:........x:...:.....---..x.::x.::xx.x..:::..x.x.xx...------.....x::x::....:..:xx.x...x..------.........:x.... 17M6I19M1I213M6D5M3D49M3D30M6D29M6D15M 289/377 76.7% 384/94230402 0.0% 31/377 8.2% 83392349 NA +15052 chr4 + 190214555 122331304 122331303 122331550 247 TGATCAATTGTTCT--TTCTGTAGACATACGTCTCGTAAAAAAGCAACAGGCTTTGCTGCTGTTCATCAGCTATTTACAGAACGCTGGCCAACAACACCAGTCAATAGAAGTCTTAGTGGCACAGCTACAGAGAGAAATATTGACTTTGAACTTGATATACGGGTTGAAATTGATAGTGGAAAATGTGTACTCCACCCAACCACCCTTCTACAAGAACATGATGATATAAGTTTGAGAAGGTAAGAAAT chr4 - 94230402 38936714 38936713 38936962 55293441 55293440 55293689 249 TAATCTATTATTGTGCTGGTGCAGGAGTACATCTCGCAAGAAAGCAACAGGCTTTGCTGCTGTCCACCAACTCTTCACTGAGCGCTGGCCAACAACACCTACAAACAGAAGTATGACTGGTACAACCACTGAGAGAAATATTGACTTTGAACTTGATATCAGGGTTGAAATTGATTGTGGAAAATGTGTACTGCACCCCACAACACTTCAGCAAGAGCACGATGACATTAGTTTAAGAAGGTAAGAGAT .:...x...:..x.--.xx..:..:x:...:.....:..:.......................:..:..:..x..:..x..:.................x::x..:......x.x.x...:...:.:..x.............................xx..............x................x.....x..x..x....x:.....:..:.....:..x.....:...........:.. 14M2I233M 200/247 81.0% 249/94230402 0.0% 2/247 0.8% 83394590 NA +12935 chr4 + 190214555 122333627 122333626 122333817 191 AGGAGTTATGATCGAAGTTCCAGGAGCTTAGATCAAGATTCACCTTCAAAAAAGAAGAAGTTTCAAACTAATTATGCTTCTACCACCCATTTAATGACCGGCAAGAAAGTGCCATCATCTCTACAGACAAAGCCTAGTGACTTAGAAACAACAGTATTTTACATTCCCGGAGTTGATGTAAAGGTAAAAAC chr4 - 94230402 38938056 38938055 38938246 55292157 55292156 55292347 191 AGGAGTTACGATCGGAGTTCCAGAAGCTTGGATCGAGAGTCTCCTTCAAAAAAGAAGAAATTCCAGGCAAATTACGCATCTACCAGTCACTTACTTGCTGGCAAGAAAGTGCCATCATCTCTACAAACAAAATCTAGTGAAGTGGAAACAACAGTTTTTTATATTCCTGGGGTGGATGTAAAGGTAAAAGC ........:.....:........:.....:....:...x..x.................:..:..::.x.....:..x.......x:..:...x.x:.:..........................:.....::.......xx.:...........x.....:.....:..:..x...............:. 191M 158/191 82.7% 191/94230402 0.0% 0/191 0.0% 83395571 NA +13443 chr4 + 190214555 122334325 122334324 122334566 242 TTTATTTATTTCAATACAGTTGCATTACAATTCCAAGACGCTAAAGACTGAATCACCTAATGCCTCCAGGGGATCTTCCTTGCCAAGAACACTGTCCAAAGAGTCCAAGCTGTATGGTATGAAAGATAGTGCAACATCTCCTCCTTCTCCTCCTTTACCTTCCACTGTCCAGAGCAAGACTAACACCTTACTTCCTCCCCAGCCCCCACCTATTCCTGCAGGTATTTAAGGAGTATATACTT chr4 - 94230402 38939141 38939140 38939368 55291035 55291034 55291262 228 TTTTTTTCTTTCA-----GTTACACTACAACTCTAAGACTTTAAAGACTGAATCGCCAAATACTTCTCGAGGATCATCTTTGCCAAGAACCCTTTCCAAAGAGTCCAAATTGTATGGTATGAAAGATACTGCCACA---------TCTCCTCTTTTATCTAGCACTATCCACAGCAAGACTAACACCTTACTTCCTCCCCAACCCCCACCCATCCCATCAGGTACTTATAGACAATAACCTT ...x...x.....-----...:..:.....:..:.....x:.............:..x...:.:..:x.:.....x..:...........x..x..............::..................x...x...---------.......:....:..xx....:....x.............................:........:..:..xx......:...x:..xx...xx... 13M5D118M9D97M 187/228 82.0% 228/94230402 0.0% 14/228 6.1% 83395184 NA +12139 chr4 + 190214555 122336177 122336176 122336379 203 TTATAAATGTTCTAGCCAAAGGAAAAGGAAGTGGAGGAGTAAAAACAGCCAAGTTATATGCCTGGGTAGCACTTCAGTCATTGCCAGAAGAAATGGTTATTAGTCCCTGCCTATTAGACTTTCTGGAAAAAGCTCTGGAAACTATCCCAATTACACCAGTTGAAAGGAATTATACAGGTAA---GCATC-----CTTCTTATATACCTCCC chr4 - 94230402 38941679 38941678 38941889 55288514 55288513 55288724 211 TTTCAAACGTTGCAGCCAAAGGAAAAGGAAGCGGTGGAGTGAAAACTGCTAAACTGTATGCATGGGTTGCACTTCAGTCGCTGCCAGAGGAAATGGTGATTAGCCCTTGCTTACTGGATTTCCTAGAGAAAGCTCTTGAAACCATTCCAATTACACCAATTGAAAGGAATTACGCAGGTCAGTTGCATCTTTGTCTTCTAGTATGCTTTTC ..x:...:...x:..................:..x.....:.....x..:..::.:.....x.....x...........::.......:........x.....:..:...:..:.:..:..:..:..:........x.....:..:............:.............::.....x.---.....-----.....x:...:.:.::. 181M3I5M5I17M 162/203 79.8% 211/94230402 0.0% 8/203 3.9% 83394498 NA +9880 chr4 + 190214555 122336871 122336870 122337027 157 TTTTAAACAGCTGTCAGCTCACAAGATGAAGATATGGGACATTTTGAAATACCAGATCCTATGGAAGAATCAACAACATCACTAGTGTCGTCTTCAACATCTGCTTACTCTTCCTTCCCTGTAGATGTTGTGGTTTATGTACGAGTTCAGGTGACAT chr4 - 94230402 38941958 38941957 38942114 55288289 55288288 55288445 157 TTTTTAAAAGCTGTTAGCTCGCAAGATGAAGACATGGGACAATTTGATATACAGGACCAGTTAGAAGAGTCCACAACATCATTAGTATCATCATCAACGTCAGCATATTCATCCTTTCCTGTAGATGTGGTGGTTTATGTACGGGTTCAGGTGAGAT ....x..x......:.....:...........:........x.....x....x:..:.xxx.:.....:..x.........:....:..:..x.....:..x..x..:..x.....:...........x..............:..........x.. 157M 128/157 81.5% 157/94230402 0.0% 0/157 0.0% 83394913 NA +3494 chr4 + 190214555 122339039 122339038 122339082 44 CTTTCCTGTAGATGTTGTGGTTTATGTATGAGTTCAGGTGATAT chr4 - 94230402 38942071 38942070 38942114 55288289 55288288 55288332 44 CTTTCCTGTAGATGTGGTGGTTTATGTACGGGTTCAGGTGAGAT ...............x............:.:..........x.. 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 83396968 NA +11889 chr4 + 190214555 122339160 122339159 122339458 299 TTCTTTTATCCA-GTTCCTAGAAACCTTT---TGCTGTCTGTTATTTTTAGCCCTCACAGATCAAATTTAGCTGTTTACCAGTATCAAGAGTAGAATGCATGTTAAAGCTGCCATCCCTGGATTTGGTGTTTTCTTCAAACCGAGGAGAACTGGAGACTTTAGGGACTACATATCCTGCAGAGACTTTATCCCCTGGAGGTAATGCTACTCAGAGTGGAACAAAGACTTCTGCTAGCAAAACTGGAATACCAGGT---------ATAGATAATGTTCTTTTAT---TCCTCTAGTATAAAGCCAAATACTATTTT chr4 - 94230402 38943037 38943036 38943347 55287056 55287055 55287366 311 TTGTTTTATATATGTTCATTGAATGCTTTATTTTCTTTCTGTG--TTTTAGCCCTCTCAAATCAAGTTCAGTTGTTTGCCAGTTTCAAGAGTTGAATGTATGCTGAAATTGCCTTCCCTGGATCTTGTTTTCTCTTCAAACCGAGGAGAACTGGAAACCTTAGGTACAATGTACCCATCAGAAAACGCATCCGTTGGTGGCAGCACTCCGCAGAGCAGCTCAAAGAATTCAGTTAGTAAATCTGGAGCACCAGGTAAAATCTACATGAATGACTGTCCTATATACAGCTTGTAGCATAAA--TAAGTAGTGTTTT ..x......x:.-....x.x...xx....---.x..x.....x--...........x..:.....:..:..:.....:.....x........x.....:...:.:..::....x.........:.x..x..:.......................:..:.....x..x.::..:..xx....:.x:x:....x:...x..:.:::..x.x.....::.xx......x...x.:...:...x.....::.......---------..::..:.:xx..:.x...---x.:.x...:.....--:..:..x.:.... 12M1I16M3I11M2D210M9I19M3I14M2D13M 217/295 73.6% 311/94230402 0.0% 20/295 6.8% 83396123 NA +13617 chr4 + 190214555 122343404 122343403 122343615 212 CTGTAGGTTCATCG---GGATTAGGCAGCCCTCTTGGCCGAAGTCGACATAGTAGTAGTCAGTCAGACCTGACCAGTTCCAGCAGTAGTTCATCTGGCTTGAGCTTCACTGCATGCATGTCTGACTTTTCCCTTTATGTATTTCATCCATATGGAGCAGGGAAACAAAAAACTGCTGTTTCTGGCCTCACACCTGGATCAGGAGGATTAGGTATA chr4 - 94230402 38943723 38943722 38943937 55286466 55286465 55286680 215 CTTCAGGTTCATCACCTGGATTAGGCAGTCCCCTTGGCAGAACACGCCACAGCAGCAGCCAGTCAGACTTGACCACTTCTAGCAGCAGCTCATCAGGCCTGAGCTTTACTGCCTGCATGTCTGACTTCTCCCTTTATGTGTTCCATCCGTATGGAGCTGGAAAACAAAAGACTGCTGTTACTGTTCTAACTCCTGGGTCAGGAGCCTTAGGTACA ..x:.........:---...........:..:......x...xx..x..:..:..:..:.........:......x...:.....:..:.....x...:.......:.....x..............:...........:..:.....:........x..:........:.........x...x:..x..x.....:.......xx.......:. 14M3I198M 174/212 82.1% 215/94230402 0.0% 3/212 1.4% 83399681 NA +13094 chr4 + 190214555 122344375 122344374 122344582 208 TTTAAAGGGAATGTGGATGAGGAGCCCACTTCAGTCACTGGTCGAAAAGATTCACTCAGTATAAACCTTGAGTTTGTAAAAGTGAGTTTGTCACGGATCAGGCGTTCAGGAGGTGCCTCATTTTTTGAAAGTCAGTCTGTAAGCAAGTCTGCAAGCAAAATGGATACTACGTTAATAAATATATCTGGTACTCAATTTTATAGTTTTT chr4 - 94230402 38944025 38944024 38944229 55286174 55286173 55286378 205 TTTCTAGGGAATGTGGATGAGGAACCCACTTCAGTCACTGGTCGGAAGGATTCCTTGAGCATTAACCTTGAGTTTGTGAAAGTCAGCCTGTCACGAATAAGGCGTTCAGGAGGCTCCTCATTTTTTGAGAGTCAGTCTGCAAGCAAAGCTACCAGCAAGATAGATACGACTTTGATAAACATCTCTGGTA---AATCTTTTTTTTTTT ...xx..................:....................:..:.....x:.x..:..x..............:.....x..::.......:..x..............:x.............:..........:......:x..:.x.....:..:.....x..x..:.....:..x.......---...:..x.xx..... 190M3D15M 170/205 82.9% 205/94230402 0.0% 3/205 1.5% 83400350 NA +10536 chr4 + 190214555 122346612 122346611 122346765 154 TTATGTATCAGCTGTTTGTGATATAGGGTCTGCCTCCTTTAAATATGATATGCGCCGACTCAGTGAAATTCTGGCATTTCCAAGAGCATGGTATAGAAGAAGTATTGCAAGACGTCTATTCCTTGGAGACCAAACTATAAATTTGCCAAGTAAG chr4 - 94230402 38945515 38945514 38945668 55284735 55284734 55284888 154 TTATTTTTCAGCTGTCTGTGATATAGGATCTGCATCTTTTAAATACGATATGCGTCGACTCAGTGAGATTCTAGCCTTCCCAAGAGCGTGGTACAGGAGAAGCATTGCTAGACGGCTTTTCCTGGGTGATCAAACCATAAATCTGCCAGGTAGG ....x.x........:...........:.....x..:........:........:...........:.....:..x..:........:.....:..:.....:.....x.....x..x.....x..x..:.....:......:.....:...:. 154M 128/154 83.1% 154/94230402 0.0% 0/154 0.0% 83401097 NA +17391 chr4 + 190214555 122347496 122347495 122347796 301 TGTTTGTTTTGTTTGTTTT-CTACTAGCATCTGGCCCAGGGACACCTGATTCCATTGAAGGGGTAAGCCAACACCTTTCCCCTGAATCATCAAGAAAAGCTTACTGCAAGACCTGGGAGCAGCCAAGTCAGTCAGCCTCCTTCACCCACATGCCTCAGTCACCTAATGTGTTCAATGAGCATATGACAAACAGCACCATGTCACCAGGGACAGTAGGACAGAGCCTAAAATCCCCAGCTTCCATAAGATCAAGGAGTGTATCTGATTCTTCAGTTCCTCGAAGAGGTAA-----------------CACTGCTCTTTTT chr4 - 94230402 38946029 38946028 38946347 55284056 55284055 55284374 319 TGCTTCTTTTGTTTTTTTTTCCAGTAGCATCAGGTCCTGGAACACCAGATTCAATTGAAGGAGTCAGCCAACATCTTTCTCCTGAATCATCACGGAAAGCGTACTGCAGGACGTGGGAGCAGCCCTGCCAGTCTGCTTCATTTACGCACATGGCACAGTCACCTAATGTTTTTAATGAACATAATGCAAACAGTAGCATGTCACCAGGGACAGCAGCTCATAACTTAAAGTCTCCAGCTGTTACAAGATCCAGGAGTGTGTCTGATTCTTCAGTGCCTCAGAGAGGTTAGTAGACTAGGTTTCTTTCACTGTttttttt ..:..x........x....-.:.x.......x..:..x..:.....x.....x........:..x........:.....:............x.:.....x.......:...x...........xx.:.....x..:..x..:..x......x.x..............x..:.....:....xx:.......:.x.................:..xx..x.:.:....:..:......x::.:......x........:..............x....::......x.-----------------.....:.:..... 19M1I269M17I13M 243/301 80.7% 319/94230402 0.0% 18/301 6.0% 83401467 NA +30939 chr4 + 190214555 122348527 122348526 122350092 1566 TTTATGTGAATGAACATGTATTTGATTTTTCTATTTTTAGATTCACTTTCAAAAACATCAACTCCTTTTAACAAATCAAACAAAGCAGCAAGCCAACAAGGGACCCCATGGGAAACACTTGTCGTGTTTGCTATCAACTTGAAGCAATTAAACGTTCAAATGAATATGAGTAATGTAATGGGAAATACAACGTAAGCTATTCAGATACAA----AGGAAATGTATTTAATCATTTTTGTAACTTTTCTTCTACTG-----TAGTAAAGAT-----------ATTCAGAACCT----TTTTTGAATGCTAAATA---------------TTTGAAAAA-GAAGTAG------ATAAACGATATAAAATGTTTTATCCTGAAAATG-----GCTTAATTCTAA--GGATACTGCAATATAAAACATCATGAAATATATGTTCTATAAAAAGGGAA-------TCAATTATAAGGAGAACAGGG---TAATTTTCTAGCTTTTCTAGCTAGG-----------------AGTAAAGCTTCATTATC-------AATGTTAATATTCAAATATTTACCA---------------------CACAGTTTTTATATAAAGT--ATGTTGTTT-CATTGTCAAACTTG-----ACCTTTTAAATAAT-------------------------CTGATTTAACTCCTTTTTAAT--TTAAATC--CTGTTTTAATTCATGACACTGGAAGCTATATATATAATAACCTT----------------TTTTTCATT-----------TTTTAGTTGGACAACTAG---------------TGGTTTGAAGAGCCAGGGCCGTC---------TGTCAGTAGGAAGT--AATCGTGATC----------------GAGAGAT-------------------CAGCATGTCTGTTGGTCTGGGAAGATCACAA----TTAGATTCTA----AAGGAGGAGTAG--TTGGAGGGACCATAGATGTCAATGCTTTGGAGATGGTTGGTATGTTGAAATTTTAAAACTGACCTAACATATCCTTAAGATATATATATCAAAAAAAATGCTTTTGGAGATGGATTCTCATGAGTTTTTCCCATGGACATGTCTGTCAAAATTAATTATTGT------------------TTCTATTTTAGCTCATATTTCTGAACATCCAAATCAGCAACCCAGTCACAAAATTCAGATTACTATGGGTTCTACTGAAGCTCGTGTTGATTACATGGGCTCAAGTATCCTCATGGGCATCTTCAGTAATGCTGATCTTAAGCTTCAGGATGAATGGAAAGTAAACTTGTATAATACATTGGATTCAAGCATAACTGATAAAAGGTATTTATTAAGGATTACTTTTTGGACACTTTACATGACTGTTCTCAACATATTGTCTATCATCTGGTGAGAAAACAGCAATTTTTCTTACAAAACTCTTATTTATTAT--GCAATTAA---TACAAATTAAAAAGCTGGGCGGGGGAAGAAAATGTTTCTTGTACTTTTTGAGTATCTGCTGTAAGACAT-------CTGACAAAGATTTTG----TTTTATGCTCTAGTGAGATTTTCGTCCATGGAGATTTGAAGTGGGATATTTTCCAAGTAATGATATCAAGGTCAACCACACCAGATCTGATAAAAATAGGAATGAAGCTCCAGGAATTTTTCACACAACAATTTGATACCAGCAAACGAGCTCTGTCTACCTGGGGACCAGTTCCTTACCTTCCGCCAAAGACAATGACTAGCAACCTAGAAAAAAGTTCACAAGAACAATGTAAGAATTAGAAGTAAG chr4 - 94230402 38947317 38947316 38949070 55281333 55281332 55283086 1754 TTTTTGTGACTTAAGTTTTGCCTACTTTCT---TATTTAGATGCACTCACAAAAACGTCAACTCCATTTAATAAATCAAATAAAGCTGGAAGCCCACAAGGAACACCATGGGAAACGCTGGTTGTATTTGCTATGAACCTGAAGCAATTAAATGTCCAAATGAATATGAGCAACGTAATGGGCAATACCACGTGAGT-------ATAAAATAGTATGAAGTGTGATTTAGCA-----GACAGTGTTGTTTTAGGGACACACAAAAAAAGTCACCATTGACCACTAAGAGCCTGTTGTTTTCTGACTTTAAATTCCTAACTTTTTCAGTTTTGAAAGGTGAAGTAACCCCTTGTGAATGCTGGTAGATGCTTAATCATAAAGACGCATGTGCTTAATTCACATTGTTTACTTCTTTGCAGTAAATCATTTTCCATTTTTCTTTTGATAGAGAAAATTGTTGTCTGTTTTCTGGAAAACTGTTGTCTATTTTTACCTCTGTTCTAGGTGGACCACCAGTGGTTTGAAAAGCCAAGGTCGTCTATCTGTGGGCAGTAGTAGGGATCGGGAAATTAGCATGTCTGTTGGTTTGGGAAGATCACAGCTGGACTCTAGAGGTGGAGTTGTTGGCGGTACCATAGATGTTAACACCCTGGAGATGGTGGGTAAGTTGGAAAGCTGCCTGATACTGGTATATGCTCTGACCAACAGCTAAAACAGTTCTTCTGTTTTGTAAGCCTGGCAGC-----ATATTACATCTTTGCATTCTTATTTACGTCTTCTCACTATGAAAAACACTTTGAATTGAAGGAATAGCTTCCTGATTAGGGGTGGATTTTAGTGTTAGCATTGCCCTAAAATTATACTAACAAGGTGTGCAACCTTGAGCCTCCTTCAGCTGTCTGGACAGATGGCAACCAAACAGATTTGTCAGCATTTCAGCTCTTTCTAGAGTTTCCCAAGCATTTACAATCTAGGAAATGGAAAGGTGGGTTTGGAAAGAGTCTGGATGTTCTGGGTCTCCAGAC----------TCAATGCATCAGGAAGAAACCAGTGCTTTCTCAGTCTCTCTATATCATGAGGATTGCATAAGGG------------TGATATTGCTAGAAAAACAAATCTTCTTACCTTTAATGCTGTGTTTCTGTGCTGCTTTCATTTTATTGTAGCTCATATTTCTGAGCACCCAAACCAACAGCCCAGTCATAAAATTCAGATCACCATGGGTTCTACTGAAGCACGTGTTGACTACATGGGGTCCAGTATCCTAATGGGAATCTTCAGTAATGCAGATCTTAAACTACAGGATGAATGGAAAATTAACCTGTATAATGCTTTGGACTCAAGCATCTCTGATAAAAGGTAAT--------ATTGCTTGCTGA----TTTTCAGG----------------TTTCTAGTACTTGATAATGTTG----AATTCTGCCTGTATGGATTCTGTCCAGTATTGACAACTAGAATCACAAGTTTAACAGA-AATCGAAGGATCAA--------------TTTTTTTTTATTGTCGGTAGGAAATTCATTAACTGTACATGTTCTTGCTGTTTTTAATACCTAGTGAGATATTTGTCCACGGGGACTTGAAATGGGATATCTTCCAAGTGATGATTTCAAGATCGACTACACCAGATCTAATAAAAATAGGAATGAAGCTCCAGGAGTTCTTTACTCAACAGTTTGACACAAGCAAACGAGCTTTGTCTACTTGGGGACCCGTTCCTTATCTGCCTCCCAAGACAATGGCCAACAACTTGGAGAGAAGCTCACATGAACAACGTAAGTAGTACGAAAAAG ...x.....x.x..xx.x.:::.:x...:.---.x.......x....:x.......:........x.....:........:.....x.x.....x......:..x...........:..x..:..:........x...:.............:..:..............:..:........x.....x....:..:-------...x..----.x...:...:x..x.x..-----.xx.x.x..x..:..xx.-----:.:x...::.-----------.:.x...:...----....:x:.:x:.....x---------------.......::-......:------:.:..:.x.:xx.:...:..x...x.:..:.:.-----.........xx.--.xx....x.xx.::.:x.x.....xxxx:..x.x.::.x.:.x.::.:..-------..x:..x.xx...:...x.xx---..x....x:xx..x......x.:.:-----------------..:x...x.:xx:....-------.:.:x..:x:x..:::x.x...x..---------------------.....:.xxxx.x..:..x--:x......x-.:x.::..x.xx..-----...:.xx.:..::.-------------------------...:.x..xx::..xx::..:--:....x.--:.x..:.:x..::.:.xx....x...-----....x.:.x.:..----------------:..:...:.-----------...x.:...:.x:.x...---------------...x..xx..x.::..x:::.:.---------.:::.::.:.:x..--..:.x...x.----------------..x....-------------------......x..x.:.xx.::x:..:xx..x...----...x.x....----.x...:::..:.--.....::..x:x.:.....:xxx.x.:.xx...:----------.::.x::x.:.::.xx:.x.:.::::x.:..:.:xx.x.x.......x:.::.x...x.xx..:------------...xx..x::xx.x::...x:...x::x.xx..x.x.::...------------------..:....x................:..:.....:..:..:........:...........:..:.................x........:........x..x........x.....x..............x........:..x...............:.x...:........:.x.....:........xx.............x.--------...:...x:..:----...x..x.----------------.x....x:.::..:.:.x:xx:----....:.x.:.::.x::x.::.:.::.x...--:...:..:---:....:..x..x..x-::x..::...xx..--------------.....xxx...:xx.x...:..x..-------...xxx.x.x.:...----.....xxx:..........x..:.....:..:..:.....:........:........:.....x.....:..:..:...........:..........................:..:..:..x.....:.....:..x............:.......:........x........:..x..x..x.........:.:.:....:.:..:.:...:.....x......:.....x.x..x:.:x... 30M3D164M7D6M4I18M5D18M5I10M11I11M4I17M15I9M1I7M6I33M5I12M2I50M7I21M3I25M17I17M7I25M21I19M2I9M1I14M5I14M25I21M2I7M2I26M5D13M16I9M11I18M15I23M9I14M2I10M16I7M19I31M4I10M4I12M2I34M10D64M12D42M18I209M8D12M4D8M16D22M4D30M2I8M3I15M1D14M14D25M7I15M4I249M 1012/1477 68.5% 1754/94230402 0.0% 366/1477 24.8% 83401210 NA +11228 chr4 + 190214555 122349141 122349140 122349326 186 TTTTTTTCATTTTTTAGTTGGACAACTAGTGGTTTGAAGAGCCAGGGCCGTCTGTCAGTAGGAAGTAATCGTGATCGAGAGATCAGCATGTCTGTTGGTCTGGGAAGATCACAATTAGATTCTAAAGGAGGAGTAGTTGGAGGGACCATAGATGTCAATGCTTTGGAGATGGTTGGTATGTTGAAA chr4 - 94230402 38947789 38947788 38947974 55282429 55282428 55282614 186 TTTTACCTCTGTTCTAGGTGGACCACCAGTGGTTTGAAAAGCCAAGGTCGTCTATCTGTGGGCAGTAGTAGGGATCGGGAAATTAGCATGTCTGTTGGTTTGGGAAGATCACAGCTGGACTCTAGAGGTGGAGTTGTTGGCGGTACCATAGATGTTAACACCCTGGAGATGGTGGGTAAGTTGGAA ....x:::x.x..:...x.....x..:...........:.....:..:.....:..x..:..x....:.x.x.....:..:..:...............:.............::.:..:....:...x.....x.....x..x...........:..::.::..........x....x....:.. 186M 145/186 78.0% 186/94230402 0.0% 0/186 0.0% 83401352 NA +27078 chr4 + 190214555 122352881 122352880 122354023 1143 TGTGTTTTTTGGTTTTCTTGCAGTACTTGATGCAGCACATCATCGACACTGGCCTGGAGTATTGAAGGTGGTATCAGGATGCCACATATCCTTATTTCAGATTCCATTACCAGAAGATGGAATGCAATTTGGAGGATCAATGAGCTTACATGGAAATCATATGACACTGGCATGTTTTCATGGTCCAAATTTTCGTTCAAAATCTTGGGCCCTTTTTCATTTAGAAGAACCAAATATTGCTTTTTGGACTGAAGCTCAGAAAATCTGGGAAGATGGTAAACTGACACATTTCCAGCTTTTACTTTCTCCTATCTTCTGTTATGACTATAAATGACAATTGTATTTCTGAAGTCCATCTCTGTTTGTTATCATGTATCTGACATGTTAAGGAGTTCACTACCAATAAGTCAATATTTATAATGTCTGGAACATGTTAATTTCTGAACTTGCCATCTTACTCCATGTTTCTTACTTAGGCAATTAAAGTTTCTGCTGCTGTGGCTAAACATAAGTCATGGTAATAGTTACTGTAATCTTTCTTATAAAAACATGAAGTGAAGGCAACATAGTGGTAGTGTG-------AGGAAATTATTTGCCAGTCAAGACTATATTATAAAAT---ATATAGGCAAGGCTGTG--CTTTTATCTCTACAGTGATAAACCC---ATTTCCTTTGAGCTTTACTTTTC----TACTTGGTGGTTTCTAC-----------ATTGAGGGAAAAAA--------ATGTTT--------------GATGTTTGATGCTTTCTTCATCTTACTAGGGA-------CAAATCCAATTACCACTAATAGAAGAATT---------ATTTGTGAATT-ATTTGGTTTTTATCCTCATTTATTCTTCATTTTTATAGCCTTCCTATATATGACAACTGAATTTATAGCTCTGAGGCCACAATTATCATCTTGAATCTAAATATGGTTTATTACTTTAAAAAAGTATTTTTATTTTGTTGTAGGCTCCAGTGATCATTCTACATATATTGTACAAACACTAGATTTTCACCTGGGTCATAATACTATGGTTACCAAACCATGTGGTGCTTTGGAAAGTCCTATGGCAACAATAACCAAGATAACAAGGCGTCGCCATGAAAATCCACCCCATGGAGTAGCAAGTGTGAAAGAATGGTTCAATTATGTTACAGCTACAAGGAATGAAGGTTAAA chr4 - 94230402 38949593 38949592 38950559 55279844 55279843 55280810 967 TGCATTTTTCATTTCT-----AGTATTGGATGCAGCCCATCATCGTCATTGGCCAGGAGTTCTCAAGGTGGTGTCTGGATGCCATATATCCTTATTTCAGATGCCACTGCCAGAAGATGGAATGCAATTTGGAGGATCCATGAGCTTGCATGGAAACCATATGACGCTGGCTTGTTTCCATGGGCCCAATTTCCGTTCAAAATCTTGGGCCTTATTTCACCTTGAAGAACCCAATATTGCATTTTGGACAGAAGCACAGAAAGTTTGGGAAGATGGTAATTCAAACAATTTCC-----TCATCCATTAACATCTTT-----------TAAATGA-------ACTTTTGAAG------------------AATATAT-TGATATGTCAG-------------AATAAGTCCAGA------------AAAGCATATTAA-------------------------------------AAAAAAAAAAAA-------------AGCCAAGTATA--------------------------TTATTATATAA--TTGAAGTGAAGATATGTTCCTGACAGTGTGTCTAGGAAGGGGACTATTTGTC----------TTGTTAATTAATTGCATGTCTGCATTGATGCAATCTTTCATTTCTACA-TAATGAATTTTGAATATC--TTAATATTTATATGTCTTCATATTGGGAAGTTTTTACTATCTGTAGATACTGAGGATTTAAATCTTTCTGTTGTTTGTAAGCATAGTGCAGATTTTTGATGCT---GCTGGCTTAGTAATGATTCCTGGTAGATACGTGTGCAAGGAAGAGGAGAAATCCCGCTTCCCTTACTAAGTTGGTGTGTTTTTTTTTTTCATTTCTCTTTT----------CTCTCCT----------------------GCCCTGTATCCATCA----CACCTTCAA-------------------------------------------TGCAGGTACTAGTGAACATTCTACATACATTGTGCAAACCCTAGACTTTCATTTAGGCCATAACACTATGGTCACCAAACCGTGTGGAGCACTTGAAAGCCCCATGGCAACAATCACAAAGATAACGAGGCGCCGCCATGAAAACCCCCCACATGGAGTTGCCAGTGTGAAAGAGTGGTTCAATTATGTTACAGCCACAAGGAATGAAGGTAAGA ..::.....::x..:.-----....:.x........x........x..:.....x.....x:.x........:..x........:.................x...:.:.............................x........:........:........:.....x.....:.....x..x.....:..................:.x.....::.x........x........x........x.....x......:.:..............x:::.xxx......-----.:.:::x:.xx:.....:-----------.......-------.:..:.....------------------x..:...-...:....:.:-------------........x.x.------------::.:...:....-------------------------------------.::x..xx...:-------------:..:..::...--------------------------..x.....x..--x..........::.xxx.xx..::......-------...::.:......:.----------x.:...xxx...---..:.xx...xx.x..::--....:..:......-.:..:..:::---..x..--..:.xx....:x.x..----..:.x..x:....:...-----------.:.....:xxx...--------x.....--------------...x.........---x:::x....x..:x..-------:.:..x.:xx.:.x.xx..x..:....x.---------x..xx.:.:..-:.x..x.....x.::......x.::..:----------.::....----------------------..:...x:x...:x.----..:...x..-------------------------------------------..:...:x.:.....x...........:.....:.....x.....:.....::.:..:.....:........:........:.....x..x:.x.....:..:...........x..x........:.....:...........:..x..x........x..x...........:....................:...............x.:. 16M5D272M5D18M11D7M7D10M18D7M1D11M13D12M12D12M37D12M13D11M26D11M2D30M7I15M10D12M3I17M2I14M1D10M3I5M2D16M4I17M11I14M8I6M14I13M3D16M7I29M9I11M1I28M10D7M22D15M4D9M43D215M 681/898 75.8% 967/94230402 0.0% 314/898 35.0% 83403288 NA +19478 chr4 + 190214555 122355777 122355776 122356760 984 TTTATCATTATGCATGTAGAGCTAAATCTGCTTCGTAATGTTGATGCTAACAACACTGAGAATAGCACTACTGTGAAGAATTCTAGTTTGTTGAGTGGATTCAGAGGAGGTTCTAGCTACAACCATGAAACAGAGACTATCTTTGCATTACCAAGGATGCAGCTTGACTTTAAATCCATTCATGTTCAAGAACCACAGGAGCCTTCATTACAGGGTATGTAGAAAAACAATTTAAAGTTAATAAGAAAATTCTAAAGGCACTTCAAACTACTGCTGTGTTCCCATGGATTTTTTGTAATACTAATATCTAATGAAATTAATTTTCTAGGCAAAATTGATTTATTTTCTTATCAGCTATATGACCTCTGGAAAATTATTTAACCAACTTATACCTCTCTCTCCTCAGTAAAATGAAGAAGAATAATTGGACTTCATTTATAGGACTATTATCAGGAATAAATGG-------CATATATAGGTTG-----AGCATCCCAATCCAAAAATCTGAAATGCCCTAAAATCCAAAATATTTTGAACACTGACATGACACAGGAAATGCTCATTGGAGGATTTCAGATTTTTGGATTGGG--------GTTCTAAAACCAGTAAGTATAATGCAAATATTCCAGAATCCAAA------------ATTTGAAAGACATCTGATCCCAAGCATAATTGGATAAAGG---ATACTCAATCTGTACTAGGGAAGTGCTTAACAAACTATCATCATCCTGTAAATCACATACAGATATTACTCATTTCTTTACAGTTGCATTTCATGTGGATGCATTTACATAGACCTATATAAATCCTTATTAATGGGAAGATGACTCATTTTATTAAATCTTTTACCATATTATTGCAGATGCCAGCCTGAAGCCAAAAGTAGAATGTAGTGTGGTGACAGAGTTCACTGACCACATTTGTGTGACTATGGATGCTGAGCTCATCATGTTTCTTCATGATTTAGTATCAGCTTATCTTAAAGAAAAAGAAAAAGGTGGG chr4 - 94230402 38951481 38951480 38952341 55278062 55278061 55278922 861 TTTCCCATTGTCCTTGTAGAGTTAAACCTGCTTCGAAATGTTGATGCTAATAACCCGGAGAGCAGCACAACTGTGAAAAGCTCAAGCTTGCTAAGTGGTTTCAGAGGTGGTTCTAGTTACAATCACGAAACTGAAACCATCTTCGCACTGCCAAGGATGCAGCTGGATTTTAAATCTATTCATGTCCAAGAGCCCCAAGAGCCCTCATTACAAGGTATA-GTAAAAACCATTTGCTTTCCTTGA------TCTGAAGCTGTTTCTCATAAATGAGGGGTTA---------------AATACAAAGATGCTGTG---CTGAT----------AAGAGGATTTTTTTTTCTAGAAATTACA--------GCAGACATATGCAA-TAAAGGACACATTTTTGT----AATGAAATGCAGAGG---------------------GAATTCTGATGAGGAAGCGAAGACCTAGTCCAGAGATGGGTTGCTTTCAAAAAACAAAACAAAAAA----ACATTTGCTAAG----AAATCAATATGAACATTACAGCTAGGCTGG--CTGTTCTGAGGGGG----CTGGTTTATGAGTTAGAAAAGGCCTGTTCTGAAAATAGGAAATAGGAGAGA--------GGAACCTGAATGGCCTGCTCCTATTTTCAAAATATTGTCTGCAGACTACAAATGGAATAGGGGAAATGCCTGCTCAGTAACAGCAATGTAATTTACAGATCAT--TTGTACTATAATTCA-----------------------------------------GTATGCTTCTACGCAG---CATGTA----CTTA--------AAG---------TGTATTAATGCTATTTCCATCTGACTGTAGATACAAGCGTTAAACCAAAGGTGGAATGCAGTGTGGTAACTGAATTTACAGACCACATCTGTGTAACTATGGATGCTGAATTGATTATGTTTCTGCATGACTTGGTGTCGGCTTATCTAAAAGAAAAAGAAAAAGGTAAG ...x:....:.x.x.......:....:........x..............:...x.x....::.....x........:.::..x..:...:.:.....x........x........:.....:..:.....x..:..:.....:...:.:..............x..:........:........:.....:..x..:.....:........:.....:-:x......x....:xxx.:xx.:.------...:...x:::...xx.:x.x..xx.x...x---------------.....x..x..x:x:..---:.:..----------..:xx.....x....::..xx.::..:.--------.x.:.xx...x:..-:..xxx.:..x.:.:.x.----.:.:.....x...:.---------------------.:.:.x.x..x.....xx:.x.:-------..x.x..:.....-----.:x.xx.x..x.x.....----.x..x:x....:----...x:.x.x......:.:xx::x.x:.x..--x..:..xxx..:..----.x.:...x..::..:.:--------.....:...x:..x..:..x:.x:x.--------:...:.::..------------....xx..:.:..:xxx.x.x:.x:.:..x....xx.:..---..:.:::x..x...x:..x:.x..:x..x...:.::..--.::.x..:...x...-----------------------------------------.x....x.:...::..---:..:..----....--------...---------.x......xx..x..x....x.x.:..:....:.x...x.x..:.....:..:.....:........:..x..:..:..x........:.....:..............::.x..:........x.....:..:..:..:........x..................::. 219M1D24M6D31M15D17M3D5M10D28M8D14M1D18M4D15M21D23M7I13M5I18M4D12M4D30M2D14M4D17M8I26M8D10M12I40M3I38M2D15M41D16M3D6M4D4M8D3M9D170M 572/826 69.2% 861/94230402 0.0% 193/826 23.4% 83404296 NA +8972 chr4 + 190214555 122359551 122359550 122359739 189 TTATAGCCATCTTTCCACCTCGGATTTTATCTACTCGACCAGGACAAAAAAGTCCAATTATTATACATGACGACAATTCCTCTGATAAAGATAGAGAAGATAGCATCACTTATACTACTGTGGACTGGAGAGATTTTATGTGCAATACATGGCATCTAGAACCTACTCTTAGGTAAGTAATGAGTATAT chr4 - 94230402 38953231 38953230 38953419 55276984 55276983 55277172 189 TTGTAGCTATTTTTCCTCCTCGCATTTTGGCTTCTCGTCCAGGGCAGAAAAACTCTTCTGGTGTACTTGAGGACAGCTCCACAGAGAGAGAAGCAGAGGAAAGCATTACTTACACTACAGTTGACTGGAGAGAATTTATCTGCAATACTTGGCACCTGGAGCCCACGCTCAGGTAACAAGCAGGTTTAT ..:....:..:.....x.....x.....:x..x....x.....:..:....:::.xx:.:x.:...x...x....::...x.x..x.:...x:x...:..x.....:.....:.....x..x...........x.....x........x.....:..:..:..:..x..:......xx.::::..x... 189M 136/189 72.0% 189/94230402 0.0% 0/189 0.0% 83406320 NA +21509 chr4 + 190214555 122362018 122362017 122362786 769 ATTTTTATTTTAGATTAATTTCTTGGACTGGAAGAAAGATTGATCCAGTAGGTGTTGATTATATTCTTCAAAAATTGGGCTTTCATCATGCTAGGACTACTATTCCTAAATGGCTTCAAAGAGGAGTCATGGATCCACTGGACAAGGTTCTGTCAGTTCTTATCAAAAAGCTCGGTACTGCACTACAGGATGAAAAGGAAAAGAAAGGCAAAGACAAAGAAGAACACTAAAAAAGTAATTTGATCTGTGAACAAATTATGATTGTGTCTGTTTTATTACACTGGAGTGTTTTTTTAGTATAATAATTTGAAATATAACTTTAAAATAATTCTAAA-----TTTGTGGCTATAATTAAAAGT----TTGTAAGTTAACCTGTTC----TAGTTC----CATCATTCTGTGTACAGTGAAGTATTGCATGAT-------AATGTAAATTTTGTGAAAAACTAGATTAAAATATATAACTGCTTGTTATGGTTTATAATTATATAATGTGCAATACAATTCCTGCATCTTTAAAATGTCTGCAGAATAACTGTGAATTTTTTTGTTATTGGATTGGCCGTAACTTTTAGAAAAAAATCTTGTTGATGATAATGTGATTTTGGGGAGGTCATTAATTGCTTTTTCTTTTTTAAATGTAGACTTATATAAATACCTGTTTGTATATAGCTTGAGTAATTGTGATATGATTGTATACCACTAAAATATT---GTTAACTA---TTATAATAAAGT-----CACAGTAATGGTTTAAGTCTGTAGTAGTTTTTCAATCTTTTTCTCCTTTT chr4 - 94230402 38953661 38953660 38954404 55275999 55275998 55276742 744 ATTCTTTTTTAAGATTAATATCCTGGACTGGGAGGAAAATCGACCCTGTTGGTGTTGACTACATCCTCCAAAAGCTGGGCTTCCACCACGCCAGGACTACCATCCCCAAGTGGCTGCAGCGCGGGGTGATGGATCCTTTGGACAAGGTTCTGTCCGTTCTGATCAAGAAACTTGGTACTGCACTACAGGACGAAAAGGAAAAGAAAGGAAAAGACAAAGAGGAATACTGAAGCGATAATGTGAC---------AACCACCATTCCGTTTGATTTTT---ATCAAAGTGTTTTAT-----TACAAGGTTTATATATGGTTTAAAGAGAAACCTAACAGCGTTTTGCTACTCTATTTAGAACTTACATTGTGAGT--AACTGTTTACTGTGGTACTTGATACCATTCTGTAT---TGGAAGTATTGCATGGTTACGACCAATGTCTATTCTGTGAAGGAACACCCGAACACTGGCAGTCGCTTCTCGGCACCCACTGGTTTATTCTGTGCAATATGATTCCTGCATCTTCAGAATAT-TGCAGATTTACTGTGAATTTTATTA-CACTTCATTTGCCATAAC---------ACAGCCCCTTTGTTG---ATGTGACT-------GGTAATTGA-----------GTTGTCAATGTAGACTTGTGtaaatttatatatatatataaCTTATGAAACTGTGAT-TGCCTTAGTGCTA--AAAATCTTTAAGTTTATTACACTTGTAATAAAATTTAACTATTGTACAGGGTTGGGTtt---tttgttttttgtttttgttgttgtttt ...:..x...x........x..:........:..:..:..:..:..x..x........:..:..:..:.....::.......:..:..:..:........:..:..:..:.....x..:x.x..:..x........x:................x.....x.....:..:..:.................:.................x...........:...:...:..:x::....x...:---------..::.:x...x:..:..x...x.---.::::........x.-----..xx.:x..x.x....:::..x..:.x..x:....x-----....:x:..x..x...:..x.----....:...--.x.....:----.:..x.----:.:........:.---xx.............:.-------.....xx...:......::.x:.xx:x..x.:xx::.:::....x.::xx::::.:x:x.x...xx.........::.............:.:...:.-......x.x............x..:-:.:.xx...x...:....---------.x.::.::x...x..---......:.-------...x...:.-----------x..x.x...........:.:.....x:x.:.x.:......:...:x.x..:......-..x:.xx:.:.:.--.....x..---...x.:..---..:.......:.-----:.:x...xx..x..::..:.---x.x......::x.:..x..x.:x.... 244M9D23M3D15M5D36M5I21M4I8M2D8M4I6M4I13M3D17M7I98M1D25M1D18M9D15M3D8M7D9M11D57M1D13M2D8M3I8M3I12M5I20M3D27M 504/709 71.1% 744/94230402 0.0% 95/709 13.4% 83408357 NA +7863 chr4 + 190214555 122383788 122383787 122383976 189 TCTTTTTC-------AAGGTAATGTTATGGGACCATATTTTGCCTTTTGTGCTGTGGTGGATGGTATTCAGTACAAGACTGGACTGGGACAAAATAAAAAGGAGTCTAGATCCAATGCAGCAAAATTAGCTCTTGATGAGCTTCTACAACTGGATGAACCTGAACCACGAATTTTAGAAACATCAGGTAAATACTC chr4 - 94230402 38956896 38956895 38957091 55273312 55273311 55273507 196 TCTTTTTCTCCTTAAAAGGACATGCCATAAGTTCTTATTTTGGCATTAGTGCTGTGTTGGATGGTGTTTACTACAAGACTGGATTGGGAAGAAGCAAGAAGGAGTCTAAGCAGAGTGCAGCTAAACTGGCTCTTGATGAGCTACTGAAGTTGGAGTGTGTGGTGGCACCAGCTTCTGGAAAGCCAAGTAAATATTC ........-------....xx...::..::.x:.x.......x.x..x........x........:..:.x............:.....x:..::..:..........:::xx.:......x...:.:..............x..:x.::....xx:xx:x.x:x...x.::..:x.:..x::..:.......:.. 8M7I181M 132/189 69.8% 196/94230402 0.0% 7/189 3.7% 83426892 NA +3469 chr4 + 190214555 122391785 122391784 122391858 74 CTGCAACCTTTGTCTTCCAGGTTCAAGTGATTCTTGTGTCTCAGCTTCCTGAGTAGCTGGAATTACAGGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x....::..........x...x::x.x......:.::::...........:....x....:. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 104194659 86019896 +6362 chr4 + 190214555 122407892 122407891 122408048 157 TACCTTTTTCTTTCAGCTGGACAACATGAGGTTGTAGCTATAGGCACAGGTGAATACAATTACAGCCAGGACATTAAGCCAGATGGAAGAGTATTGCATGACACTCATGCTGTTGTTACAGCAAGAAGGTCTCTTCTTAGGTAAGACAATACATATA chr4 - 94230402 38959876 38959875 38960032 55270371 55270370 55270527 157 TATGTTTTCTTCTTAGGAGGAGAGCATAAAGTCGTAGCTCTAGGAACAGGAGACTGCAATTACAGCAATGATTATTCACCTGAGGGAAGAGTGGTGCACGACAGCCATGCCATCGTTACTGCACGACGTTCTCTTCTCCGGTGAGGTTGTGTGTACA ..:x....::.:.:..xx...x.:...:.:..:......x....x.....x..x.:..........x.x..:xx.xx:..x..x........:x....:....x:.....::.:.....x...x..x.x........:x...:..::x:.:::..:. 157M 106/157 67.5% 157/94230402 0.0% 0/157 0.0% 83448016 NA +8651 chr4 + 190214555 122411212 122411211 122411399 188 TTTATTTTAGGTACTTTTATAGACAACTTCTGCTCTTCTACAGCAAAAATCCTGCTATGATGGAAAAATCAATATTTTGTACAGAACCAACTTCTAATCTACTCACTCTTAAACAGAATATCAACATTTGCCTTTACATGAACCAGTTGCCTAAAGGATCAGCCCAGATTAAGTCACAGTTGTAAGTA chr4 - 94230402 38960201 38960200 38960388 55270015 55270014 55270202 188 TTCGTTTTAGATATTTTTATCGACATCTTTTGCTGTTCTATAATGAAAATCCAGCACACAGAGAGCAGTCCCTGTTTTGCACAGCACCTGACTCGAAGCTGCTTACCCTAAAGCGGAATATAAATATCTATCTCTATATGAGTCAGCTGCCAAAAGGATCTGCTCAGATAAAAACACAGCTGTAAGTA ..::......:..:......x....x...:....x.....:.:::.......x..xxxx.x:..:x.:..xx.:.....:....x...x:x:..x..x..:..:..:..x..:.:......x..:..:.::..:..:....::...:....x........x..:.....x..:x.....:........ 188M 132/188 70.2% 188/94230402 0.0% 0/188 0.0% 83451011 NA +12670 chr4 + 190214555 122412562 122412561 122412814 253 TTTCTTTTCTTTCTCTAGACGTCTTAATCCACATTCTATATCTGCATTTGAAGCCAATGAAGAACTCTGTCTCCACGTGGCTGTTGAAGGCAAAATTTATCTGACTGTTTACTGTCCTA--AAGATGGTGTTAATAGAATAAGCAGTATGTCCTCAAGTGACAAATTGACCAGATGGGAAGTGCTTGGTGTACAGGGAGCATTGCTGAGTCATTTTATACAGCCAGTTTACATCAGCAGTATACTTATTGGTGAG chr4 - 94230402 38961464 38961463 38961713 55268690 55268689 55268939 250 TTTCTTGTCTTACTTTAGATGTCTTAATCCACATTCTCTAGCTGCTTGCCAAGCTGCTGAAGAACTATGTCTTCACGTTGCTATAGAGGGCAAGACTTATCTTTCTCTTTCTTGTCCTTCTAAAACTGTG-----AGAGTAATCAGTATGTCTGCTAGTGACAAGTTAACAAAGTGGGAAGTGGTTGGTGTTCAGGGAGCGCTGCTGAGTTACTTCATTGAACCGGTTTATATCAACACTATTCTTGTAGGTAAG ......x....x..:....:.................x..x....x.x:x....::x.........x.....:.....x...:.x..:.....:.:......xx..x...x:......x--..:.:x...-----...:...x.........:x.x........:..:..x.::.........x.......x........::........:.:..:..xx.:..:.....:....:..x...x...:.x...:.. 119M2I9M5D120M 190/248 76.6% 250/94230402 0.0% 7/248 2.8% 83451098 NA +13041 chr4 + 190214555 122415313 122415312 122415649 337 TTCATTTATTTTATTTTGGGATGTTCTTTTAATATTGAACTTGAGTGT-TTTGTTTTTGCTTTCTAGGTGATGGGAATTGCAGTGATACCAGAGGCTTAGAAATCGCTATAAAGCAACGTGTTGATGATGCACTCACTTCAAAACTTCCAATGTTTTACTTAGTCAACAGACCTCATATTAGTTTAGTACCCTCTGCATATCCCCTTCAAATGAACTTGGAATATAAATTTCTGAGTCTGAATTGGGCACAAGGAGATGTTTCTTTGGAGATTGTGGATGGCCTGAGTGGGAAGATCACTGAAAGGTTAAAATTACTAATTTCTTTAAACCATATATT chr4 - 94230402 38963033 38963032 38963360 55267043 55267042 55267370 328 TTTATTCATTTATTTTTTGCTTGTTGATGTAAT--TGCATGTGATTGGGTTTGTTTTTATT----AGGAAATGGAAATTGCAGGAGTTTGAAAGGGTTAGAAATAGCTATAAGACAACGTATCGACGATGCACTCACATCAAAGCTTCCAGTGCTTTACGTGGTCAACAGATCATTTACTTACTTGGTGAACACTGTACAACCAATTCAAGTGAACGTGAAACAGAGGTCTCTTAGTTTGAATTGGACATTGTCAGATGTGCAGCTGGAGGTTGTGGATGGGCTAAATGGAAAAGTCACTGAAAGGTCAGATTT----TTTTCCTTATTCCTTACATT ..:...:....xx....x.xx....xx.x....--..x.:x...x..x-.........::.----...x:....:........x::.x:x.:...x........x.......::......:.:..:...........x.....:......:..:.....x.:.........:.x:x..:.x::..:..:xx.x...:.:.x..xx.....:.....x..:..:.x.::.:...x...:........:..:x:xx......x:xx:.....:..........x..:.:...:..::............:.:.x..----x....:...xx..x..:... 33M2D13M1I12M4D249M4D20M 232/327 70.9% 328/94230402 0.0% 11/327 3.4% 83452280 NA +6044 chr4 + 190214555 122421242 122421241 122421411 170 TTTATTTCTCTCTGCTTAGTTCCCCATTTAAAAGTGGTATGTCAATGGCAAGTCGGCTTTGTAAGGCTGCAATGTTAAGTCGGTTTAACCTGCTTGCCAAAGAAGCTAAAAAA---GAATTACTTGAAGCTGGTACATATCATGCAGCTAAGGTAAGTCCTTAAAGGAATAAA chr4 - 94230402 38963804 38963803 38963973 55266430 55266429 55266599 170 TTTATTTCACCTA---TAGTTCGCCATTCAAAAGTGGCTCTTCCATGGCAAGCCGCCTTTGTAAGGCAGCGATGCTGAGCCGTTTCAAATGCCTTGCTGCGCGAGCAAAACGAACTGATCTGCTTCAAGTTGCCACGTACCGTGAAGCTAAGGTGAGCTAGAAAGGGAGGAAA ........x.::x---......x.....:........:x:x..x........:..x...........x..:...:.:..:..x..:..x:xx.....::x:x:...x...x:.---..x:.:...x...:..x:..:..:.:..x.........:..::xxx..:...:x... 13M3D97M3I57M 114/167 68.3% 170/94230402 0.0% 6/167 3.6% 83457438 NA +3184 chr4 + 190214555 122422936 122422935 122423007 72 AGCAAGACCCTATTTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAAAAACTG chr4 - 94230402 49250028 49250027 49250099 44980304 44980303 44980375 72 AGCAAACATCTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATG .....:xx:..x:x..::x...........:..........:.:.x:.........:...:.:.:xx..x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 73172908 NA +3185 chr4 + 190214555 122422949 122422948 122423001 53 TTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAA chr4 - 94230402 49250038 49250037 49250090 44980313 44980312 44980365 53 TTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAA ...x:::..xx.........:............:.x:.........:...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 73172911 NA +3094 chr4 + 190214555 122422958 122422957 122423007 50 AAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAAAAACTG chr4 - 94230402 37322393 37322392 37322442 56907961 56907960 56908010 50 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTG .....:..............:...:::......x.:..:......::x.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 85100565 NA +5334 chr4 + 190214555 122429611 122429610 122429731 121 TTCTTTCTTCTCTAGTGTATGTCTGCCTCCTATCAAGAAGCTAAATGTAAGTTGAAATCCTACTTACAACAACATGGCTATGGATCCTGGATTGTGAAATCTCCCTGCATAGAGCAATTTA chr4 - 94230402 38964808 38964807 38964928 55265475 55265474 55265595 121 TTTTTTCTCTTTCAGGTCAAGTCTAATTTGTATCAGGAAGCTAAAAAGTTGCTGCATAGCTACTTAGAGCAACATGGTTATGGATCCTGGATTGTGAAGTCTCCACATATTGAACAGTTCA ..:.....::.::..xx:.x....:x:.:x.....:.........x:xxx.:..x.xxx.......x.:........:....................:.....x:::..x..:..:..:. 121M 84/121 69.4% 121/94230402 0.0% 0/121 0.0% 83464803 NA +3344 chr4 + 190214555 122439171 122439170 122439222 52 TCTTTTCTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTGGAGTTGGAGT chr4 - 94230402 72884654 72884653 72884705 21345698 21345697 21345749 52 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGAAT ....x..::....:......:........:.........:...x..x...:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 49554517 NA +3310 chr4 + 190214555 122457730 122457729 122457786 57 CTATTTTGCAGATTAGAAAACTGAGGCTCAGAGAAGTTAAGTAATTTGCTCTAGGTC chr4 - 94230402 10729206 10729205 10729262 83501141 83501140 83501197 57 CCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:.....:...:.x:............x..x.x.:..............:.x::... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 111728524 78486031 +3193 chr4 + 190214555 122482855 122482854 122482891 37 TTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629063 81629062 81629099 12601304 12601303 12601340 37 TTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ...........:.....x................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 40853792 NA +3576 chr4 + 190214555 122482856 122482855 122482910 55 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG--------AGTAAATATATATAAAAGGCT chr4 - 94230402 81629066 81629065 81629128 12601275 12601274 12601337 63 TGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGTTTTACAGTATTTAAATATAAATGGCT ........:.........................--------....xx..x.......x.... 34M8I21M 50/55 90.9% 63/94230402 0.0% 8/55 14.5% 40853790 NA +3332 chr4 + 190214555 122482856 122482855 122482900 45 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGTAAATATAT chr4 - 94230402 18982317 18982316 18982361 75248042 75248041 75248086 45 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ..................................::x::..x... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 103500539 86714016 +3479 chr4 + 190214555 122482856 122482855 122482902 47 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGTAAATATATAT chr4 - 94230402 18982315 18982314 18982361 75248042 75248041 75248088 47 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ................x...................x..:x..x... 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 103500541 86714014 +3126 chr4 + 190214555 122511092 122511091 122511142 51 TCTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTTTTTGA chr4 - 94230402 44858314 44858313 44858364 49372039 49372038 49372089 51 TTTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTTGA .:.....x.........:..:......xx.xx..x................ 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 77652778 NA +3416 chr4 + 190214555 122549307 122549306 122549380 74 CCTTTGGTGTAGATA-CTATTATTATCCCCACTTTACAAGTGAGAAAACTGAAGTGCTGAGAGATTAAGTAAATT chr4 - 94230402 10729178 10729177 10729252 83501151 83501150 83501225 75 CCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTT ...x..:x....:..-:..:...:.x.:...:......:...:.........:.::.xx.x..:........x.. 15M1I59M 54/74 73.0% 75/94230402 0.0% 1/74 1.4% 111820129 78394426 +3251 chr4 + 190214555 122580982 122580981 122581107 126 AAGAAAGAAAAAGAGAAAGAGA--TTGAGAGAGGAAGGAAAGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAA chr4 - 94230402 60249474 60249473 60249601 33980802 33980801 33980929 128 AATAAAAAATGAGGTGAAGTGAACCTGAATGGGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAA ..x...:..x:..:x:...x..--:...:x.:...x:.:..:::.:::.....x.x.....:......x......x:...xx.....x:...x:..:::.x.xxx.x.....x:..:x:.xx.:.... 22M2I104M 77/126 61.1% 128/94230402 0.0% 2/126 1.6% 62331508 NA +3208 chr4 + 190214555 122612848 122612847 122612921 74 TACCTTTTGGAGAAGTGATTTGAATCTTTCTAGGAATTCTTTGGGTGGTTTTTTCTCATAAGAATCACATGAAG chr4 - 94230402 39007362 39007361 39007435 55222968 55222967 55223041 74 TACCTTTTGCATCAGTTTTGAAAAGCTGTTCAGAAACTCTTGGGGTTTTTTTCTCTCGTAGGATTCACATGAAG .........x.xx...xx.xx:..x..x.::..:..:....x....xx....:....:..:..x.......... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 83605486 NA +11274 chr4 + 190214555 122617005 122617004 122617483 479 CTGAACACAGCATCTGGCCTGCTTTGCATTTTCCAAC---CCATATGCTTACCCAATATGAATGTAGATTAATAATATGCATCTCTAAGACA----CAAACCTATCAGGTTTGCTTTGCATAT--ATAGCCAC--AAGCCGAGAAGCAGCTTATCTGGTTTCCT-TATATCAAGGCAGATTGC--CTCTCATAAGGGCAAGGTGGTGTCCTTTCCATATGTTTGCCAAAAT--GCTTATTTAATAGAAACTATTTATAAATGTTCAATATAGCACTTTTTTTTCCTTGAAAACCACACGTTCATGTTTGTTG-AAGTTTTTTCTTTTCTCTTCTTTTTGACCACAACCGGCTTAACTTACTGGAAAAAATAATATTCATATTTAAAGAGGTAAATTTTCCAGCTGAAACTGAAAATACTGACTGCTTCATCCGTGATGATCTGAAAAACCAGCATTTCTCACAGAGGC--------------TCATTTTGCTGAGTTAACATTTACATGT chr4 - 94230402 39008443 39008442 39008909 55221494 55221493 55221960 467 CTGAAGCCCATTTCTAACGTGTTTTCCATTTTCCAAAGAAACATACACTTA-------GAAATGCTGATTA------TGCACAT-TAGAACGGCTCCAAAGACGTCATCTTTGTTTTGCATACCAACAGCTACCAAAGCTGA-----ATCTCGTCTGGTTTATGAGATGCCACTGCAGTGTGCTGCTTTGGCAAGGACAAGGCAA---CCTCGGTGTATGTTGCCTATAGCTAGCGTA---AATAGCATCATCTTATGTTGGTTAGATACAACATTTTATTTTCATTTAAAACCACACTTTTGTGTTTGTTTCAAGCTTCTT-----------------ACCGTAACCAGACTTGCTTACTGGAAAAAA-AGCACTCTTTTTTCAAGAGATTGATTTTCCAGCTGAAACTGAAAACGTTTTGTGCCTCATCCGTGATGAGCTGAGAAACTAGCACTTCTCATATATGCTGCTTTTTCTTTTTTTATTTTGCTGAGTTAACAGTTAGCTGT .....xx.x::x...::.x..:...x..........x---x....::....-------x:....:x.....------....:x.-..::..:----....xx::...xx....:........:--.:...:..--....:..-----.x..::........x:x-x..::..xx....xx...--..:.x::....:.....:::---...:xx::......xx.:.x.::--..x..---.....x.x.xx:....:xxx...x:...:.:..:...x.....x..x..........x..::........x-...:..:..-----------------...::....:.x:.x:..............-.::.:..x.x...x.....:.x:......................:::.xxx...:.............x....:....:....:......:.x.x..--------------.:.................x...xx... 37M3I11M7D13M6D7M1D7M4I27M2I8M2I7M5D17M1I18M2I20M3D23M2I5M3D71M1I9M17D30M1D98M14I28M 311/436 71.3% 467/94230402 0.0% 74/436 17.0% 83608562 NA +16266 chr4 + 190214555 122620659 122620658 122621476 818 TATGTCCAATGTATTTTCAGAAATAAATTCAACTGGTCTTACCTCTACATCTTCTGGAGCTGGCAGAAATTCAGGGACCTAGAGCAAAA--------------GAAAATTTGT--TCTGAGTTATTTTTAT-AAGCCAAACCCTCCTTTTATATTAATTGAAAAGTATGATTTAGATTTTGTTGTGACAAATATAGT-CTTACCAAGTCATTCACATAATTTTTCAGCTGATCAACAATATCTATAAGTTGAC-GCATTCTAATCATGTGGCGATCTTGACCTTGG-GAGCTTGATTTGTGGACCAGTGTCCCCAAGAAGATGACCATCAGACAGATGACAATCCTCTCCATGTTGCCAGGACTGGATCTCATAAGTACCAACAGTAGAGCTAGACCTTGGTCTC----GTTTTCACTTCAGCTTGA-CTGAGAACAGGT-TGTCAGTTAAGCTACCTATTTATTCATCCTTCAGGGAGAGGTAAAGCCCTCCCATTGCAGCCTGGAAATCTTTGTAAAATGGATGAATGTGAGTAACTCTTTTTTCTTTTCCACTGGCTAGGTATACGTGTGCATGTGCTAATGTGTGGGGGCAGGGATTGATGGAGTCAA-CGAAATGTGCCCCATCTGCATCTTTGACAGGAAAAAGAGAG-AATGGGTGAATTCCAATTTTCAGCATGAATCAAGAAGTATGTATAATAAACAGTAGGTACTACAAGACTTCAAA--AAAGTAAACAAAAACACT-TTGATCTCTTTTTCTCGGCCTCCCCTGGCATCTTACCTGTTCTCTC----TGACAGTCATAAGGGCACTTTGATAATGAGTAAGATGGCAACATGTGCTTTCA chr4 - 94230402 39011633 39011632 39012435 55217968 55217967 55218770 803 TACATTTGATATAGTTAGAAAGAAATGTTAAAGCAGCCTCACCCCAGGGTTTTCTGGTGTATGCAGCAATTCGACATCCTACAATAAAACAAATCGAAGTTAGAAAAGTTTAGCATTTGAGCGATGTCTGTCAAAAGATATATTCAATACATAATACTTGAAAATAAC--TTCAGAATTAG----GACAAATGCTTTGCTTACCTTATCTTTCACCACATCTTTTAGATGGTCAATTGTCTTTGAAAGCTGCTTGTATTTCA--------------TTGCTTTTGGTGAAGTTGCAGTCAGCACCATACTGAAACAGAAGAAGAGCATACAGAAAATAATCATCCTCTCCATACTGATGAGTTTTGTT-------GTGTTAGGAGCAAAGTTG-----TGCTATCCAAGATGAACACTTCAGTTTGAGCTGTGCTCAGGTATGCCACATAC-CTACCTATATATTGGTCTTTGATGCAGATGTAAAACCCACCCATTTCAGTTTGGAAAGCTTTGAAGAATGGATTAA--TGAGTAACCCTTTTTTCTTTTCCATTGGCTAGGTGAGTTTGTGCGTA-----------GGGGGCAGGGATTGATGGAGTGAATTAAAATATGCCCCATCTGCACATTGGACAGGAAAAAAAGAGAAAAGGGTGAATTCCCATTTTCGTTTTGAGTCAAAAAATGAACGTAGTAAAAAGTAGATGCTTAGAAACCACAGGCCCAGGTAAACAAAGATTCTGCTTTTTTTTTTTTCCCTGCTTCTTGCAGCAACTAATCTCTTCAATCCACTTGAAATTCATCA--ATATCATGCTGATGA--AATATGGCAGGACTTCTTTTCA ..::.:::..:..x..xx.:.:.x.x:..x..x::.:..:...:.x:x:.:......x.:xx....x.....::x:x....x.::....--------------:...:...:x--.:....:x..x.:.:.-..:xx.x.:x:..xx.x:...x..x.......xx.:--..:...x..x.----.......::xx.-......xx:..x.....xxx..:...:..x..:....:x:.x.:.:x...:..x:-.:...::.--------------...x::....-..:x...xxx.xx.x....xxx.xxxxx......x..x...xx::x.:..:.:x...........::..x:::.x:.x.x.-------..:::.:x..:.:..:.:-----..x.x..----:.xxx........:....-...x.xx.....-..:..xx..x-........x....x:..:..x.x.x...x.....:...x......x...::......x.....x.:.......x..--........:...............:.........:x::x.....:.:-----------.....................x..-::....:.............:x..x...........:....-..x...........x......:x:x...:....:..:.:x:::..:....x.....:.:..xx:.:..:x..::--x.:.........:.:x..-:.xx.:.:......:.x..:..::x::...x..x.:..x...xx..----...x.x....x.--::.::x..x.:....--..x......:x.:x.x:..... 89M14I10M2I16M1I36M2D11M4D12M1I55M1I8M14D10M1I81M7D18M5D7M4I18M1I12M1I10M1D76M2D47M11D24M1I41M1I74M2I18M1I46M4I12M2D15M2D22M 508/768 66.1% 803/94230402 0.0% 85/768 11.1% 83609026 NA +3013 chr4 + 190214555 122650321 122650320 122650484 164 TTGAGAGGTATGATAAGGAGAAAGGCAGTAGTGGGTCATGGTTAGTACAGAGACGGTTAAGCCAGATAAATGCTGAGTTTGAATCACAGCTCTGTCATT--------TGAAGGCT----GTGAGATCTCAGGCAAGTGATTTAACCTCTCTGAGCCTATGTTTTCTCATTTCTAAA chr4 - 94230402 60684593 60684592 60684749 33545654 33545653 33545810 157 TTGAGAGGAA--------ATAAAAACAG----GCGTTGTGGTCGAGACACAGAAGTCTAGGC---ACAGAAGTCAAGT----ACCTCAGACCTGTTCTTGGCCCCACTGCAGACTTCCTGTGCAGTCTGAGGCAAGTGATATCACCTCTCTGTGCCCCCATTTCCTCCTCTGTAAA ........x.--------.x...::...----.x..::....:::x...x...x.x:..:..---.:.:.x.:::...----.:.x...x:....:x..--------..x..:..----...x::...x...........x.x.........x...:x::...:...x.:.x.... 10M8D10M4D30M3D13M4D17M8I8M4I57M 100/145 69.0% 157/94230402 0.0% 31/145 21.4% 61965728 NA +3025 chr4 + 190214555 122652627 122652626 122652681 55 TCTTTTTTTTTTTTTTTTTTTTTTTTTAATAATTTTTTTTTTTTTATTATACTCT chr4 - 94230402 28058681 28058680 28058735 66171668 66171667 66171722 55 TCTCTTTTTTTTTTTTTTTTTTAAGCAAATAATGTCTTTTTTTTTACCATAATTT ...:..................xxx:x......x.:..........::...x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 94593946 NA +3070 chr4 + 190214555 122652629 122652628 122652737 109 TTTTTTTTTTTTTTTTTTTTTTTTTAATAATTTTTTTTTTTTTATTATACTCTAAGT--TTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGC chr4 - 94230402 87421079 87421078 87421185 6809218 6809217 6809324 107 TCTTTTTTTTTTTTTTTTCTTATTTGAGGATACTTTTTTTTTCATTAT--TTTGATTTATTCATACTTCCTGTG--CATTGAGTAGAGCCCTTTTAAATGTTTTTATGTGC .:................:..x...:.x:..x:.........:.....--.:.:.x.--..:.x:x.x.x....--.....x.:..:x:xx..x:.x....x.x:...... 48M2D7M2I15M2D35M 74/105 70.5% 107/94230402 0.0% 6/105 5.7% 35231550 NA +3016 chr4 + 190214555 122662301 122662300 122662373 73 ACACTTATAAATACTTGTAATATTTTTATGTAACCCATATGTATGTATATGTATGCACACATATACACTGAAA chr4 - 94230402 15804883 15804882 15804955 78425448 78425447 78425520 73 ACACCTGAAAATACTTGTGATACTTTTGATTGCTTGATATGTACGTACACATATATGCACACATATGTTACAA ....:.:x..........:...:....:xx.:x::x.......:...:.::...:::....:...:::.:x.. 73M 47/73 64.4% 73/94230402 0.0% 0/73 0.0% 106857418 83357137 +3062 chr4 + 190214555 122662301 122662300 122662373 73 ACACTTATAAATACTTGTAATATTTTTATGTAACCCATATGTATGTATATGT--ATGCACACATATACACTGAAA chr4 - 94230402 15808433 15808432 15808507 78421896 78421895 78421970 75 ACACCTGAAAATACTTGTGATACTTTTGATTGCTTGATATGTACGTACACATATATGCACACATATATGTTACAA ....:.:x..........:...:....:xx.:x::x.......:...:.::.--.............:::.:x.. 52M2I21M 51/73 69.9% 75/94230402 0.0% 2/73 2.7% 106853868 83360687 +10275 chr4 + 190214555 122663949 122663948 122664200 252 TAATATCGTCTATTTCCTTTTCTTGTTACATTTCCTGTGTGCTGAGCT-GGGGTATTTATTCTTCTGAATGATGCAATGGGTTACCAAGATAATAT-------ATCAGGAAGGAAATCTTTCAAGATATAAGGACATTGACACTACCTTTTGTTTCAGTTTGATTAAACAGATGGAATTCCACGCAAGTGGAAAGTTGTGAAGGCGGACCCTATAGTATATACAACATCAGTGAACAAAAGCAGTGGGAAGTCACTGAAA chr4 - 94230402 39030346 39030345 39030592 55199811 55199810 55200057 247 TAATATTTTCTATTTCCTCTTA--GTTCAGCTTCCTGTATAATGAGCCCAAGTTGTTTATTCTTCTGAATGATGCAATGGGTTAACG-GATGGTATGTGGGTTATCAGTAAGGAAATCTG--AAGGTACAAGGACCATAACAGTACCTTTTGTTTCACTTTGATTAAACTGGTGGAATTCCGGGTAAATGGAAAATTGTGAGGGCG-----TATAGCCTTCATTTTATCA---AGAGGATACAGTAGGAAGTAACTTAAA ......:x..........:..x--...xx::.......:.:x.....:-::.x.:.............................x.:-...::...-------.....x..........x--...:..:......xx.:...x..............x...........x.:.........:x.:..:......:......:....-----.....:x.x:.:xx:....---.:x::.x:....:......x...x... 22M2D24M1I38M1D8M7I17M2D84M5D19M3D27M 185/239 77.4% 247/94230402 0.0% 21/239 8.8% 83633603 NA +3149 chr4 + 190214555 122686559 122686558 122686615 57 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGGACTTACATATG chr4 - 94230402 10650381 10650380 10650437 83579966 83579965 83580022 57 GTGTGTATGTGTCTGTGCGTGTTCATGTGTGAGCGTGCTTGGATGGAGTTACATTTG ......:.....x....:....x::......x.:...:x..x.....x......x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 112036178 78178377 +6531 chr4 + 190214555 122701146 122701145 122701311 166 TGGTAAAACATGAAAACAATCACATTTCTTTGTTTTAA---TCTTCCTTTTCTTTCATCCTAGTCATTTCTGTAGAAACAGAGGCTGAAATGACTGGGTAGCATTATGGAGGATTTCTGGTAATAATAACACCTACAC-AGTGTGCTGCAGGAAATAGCGAGTCCATACC chr4 - 94230402 39047913 39047912 39048072 55182331 55182330 55182490 160 TGGAGAAACAGAGACATGatta-------ttattttaaaaatatttCATTCCTTTCATTATAGTCATTTCTGCAGAAACACAGTCAGAAGTTGCTGTGTAGGAGTAT---GGATTTCTGGTAACAAAGCCACCTACACAAATCCACTGCAGGAAATAGGAAGCCCATACC ...x:.....x::.x.::..:.-------..:......---.x..:.x..:.......:x............:.......x..x.x...:.x:...x....x.x...---.............:..x:x.........-.:.x::.............x:..:....... 22M7D9M3I66M3D28M1I31M 119/156 76.3% 160/94230402 0.0% 14/156 9.0% 83653233 NA +3000 chr4 + 190214555 122707016 122707015 122707066 51 ACTTTATAACTGTATTCATTTTGTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 - 94230402 35536383 35536382 35536433 58693970 58693969 58694020 51 ATTATGCAAATGTACCCACTTTTTTTCTCTCTCTCTCTCTTTTTTTTTCCT .:.x.::..x....::..:...x.:.......................::. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 87170633 NA +3086 chr4 + 190214555 122707028 122707027 122707070 43 TATTCATTTTGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929905 18929904 18929947 75300456 75300455 75300498 43 TACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..:.x.x...x...............:................ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 103777123 86437432 +3095 chr4 + 190214555 122707039 122707038 122707074 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 103777127 86437428 +3166 chr4 + 190214555 122707039 122707038 122707072 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 103777125 86437430 +3374 chr4 + 190214555 122716634 122716633 122716687 54 TATATACACACGTGTGTGTATATGCACATACACATATGTGTATATATACACATA chr4 - 94230402 38535896 38535895 38535949 55694454 55694453 55694507 54 TATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA .............:::..x:x..:..........:........:...:..:.:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 84180738 NA +3344 chr4 + 190214555 122716639 122716638 122716722 84 ACACACGTGTGTGTATATGCACATACACATATGTGTATATATACACATATGTGTATGTGTGTGTATACATACACATATGTGTGT chr4 - 94230402 71630132 71630131 71630205 22600198 22600197 22600271 74 ACTTACGTGCATGCATATACACACACAA----------ATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x:.....::..:....:....:...x----------.......:..x.x......::.....x.:...:::x.......... 28M10D46M 55/74 74.3% 74/94230402 0.0% 10/74 13.5% 51086507 NA +3034 chr4 + 190214555 122716645 122716644 122716689 45 GTGTGTGTATATGCACATACACATATGTGTATATATACACATATG chr4 - 94230402 66471247 66471246 66471291 27759112 27759111 27759156 45 GCGTGTATACATGCATATACACATATGTGTTTGTAAATACATATG .:....:..:.....:..............x.:..x.:....... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 56245398 NA +3079 chr4 + 190214555 122716676 122716675 122716734 59 TATATACACATATGTGTATGTGTGTGTATACATACACATATGTGTGTATATACACACAC chr4 - 94230402 65364574 65364573 65364632 28865771 28865770 28865829 59 TATAGCCATGTATGTGCTTGTCTGCATATAGATACATATATATGTGCATACACACGCGC ....xx..::......:x...x..::....x.....:....:....:...:....:.:. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 57352102 NA +3077 chr4 + 190214555 122725895 122725894 122725949 55 CTCAAAAAAAAAAAAAAAAAAAAAAAATCAAGATGGATCAAGGACACAAATCTAA chr4 - 94230402 58801927 58801926 58801981 35428422 35428421 35428476 55 CTTAAAAAAAAAAAAAAAGAAGAAAAATAAAGATTTATGAGGTACATCAGTCTAA ..:...............:..:......x.....xx..x.:.x...:x.:..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 63923968 NA +5042 chr4 + 190214555 122730527 122730526 122730645 119 AAGGACTAAAACAACGCTA----TTAATAACGAGTAGTCTTTTTCATCACTCTCAAAACATCTTCCTCGTTTATTTCTCCATCTCTATCATGATCAGCTTCATCAAGCATTTCCTGTAAAACA chr4 - 94230402 82848439 82848438 82848561 11381842 11381841 11381964 123 AAAAAATAAAATAAAGTTCAGTTTCAGTAAAGGCTGGTCTTCTTCATGATCCTCAAGAATTCCTGCTCGTTCACTTCCCCATCCCCATCTCTATCTGCTTCATCAATCATTTCCTGAAAGATA ..::.x.....:..x.:.x----.:.:...x.:x.:.....:.....x.::.....:.xx..:.x......:.:...:.....:.:...x:x...x..........x.........x..:.:. 19M4I100M 84/119 70.6% 123/94230402 0.0% 4/119 3.4% 39882088 NA +4097 chr4 + 190214555 122730547 122730546 122730941 395 TAATAACGAGT-AGTCTTTTTCATCACTCTCAAAACATCTTCCTCGTTTATTTCTCCATCTCTATCATGATCAGCTTCATCAAGCATTTCCTGTAAAACAAAATGTAAATATATGAAATAC-------------ATTTAAAATGACATAA----ATGAAGTC-AAACAC------ATATTCAAAACCAAATTTTATTTTAAATGCATAAG-TGCAACTAAAGTT--------AGAATTATAATCCTAAATTATCACATAAGTTATAATTACATATAAATTATAATTATAAAAATAAGCAAAATCTACCTGAAGTTCATCA--TGTTAAATTTTCCCCTGGTTTCTTAGCAAACCTCTTGATACCGGTTAGTATTATACTTCCAGTATCATCATCATCAAATAATTTGAAAGTCTTCAATATTTCTTCTTTT chr4 - 94230402 82842793 82842792 82843187 11387216 11387215 11387610 395 TAGTTACAGGTCAGTCAATGTCAGAATCCGCAAAAACTCTTCTGGATCCACTTCCCCATCTCCATCCACGTCTGCTTCATCAATCATCTCCTGTCAGACAA----CGAAGATTTGGGAGACCAGATTAGGTGGGATCTGAGAGGATGGAGGGTCATAAAGTCTAAACACCAATGAAGATTTCAGACAAGGCTTCATGTTAACACCAGGAGAAGCAGATTGTGTCTGTTGCAAAGAAACAAAGCCC--AATTCTCCAATGAGTT---------TGTGCTTCACAA---------------------ACCTGCAGCTCCTCGTCTGTGATGTCTTCTTCAACCTCACCAGCCACCAGCTTGAGTTTCTCAAAGGAGATCTTGCCAGTGCCATCATAATCAAACAGCTTGAAACCTTTCAGGATCTCCTCTTTT ..:.x..::..-....xx.x...xx.::.x.....xx.....:xx:.::.:...:.......:...xxx:..x..........x...:......x.:....----::..x..x..::.x..-------------..:.:.:.x..::x.:----..:.....-......------.x...:x.:..x.:::..:..x....xxx..x:..-x...:x.x:x..:--------....x:.x.::..--....x..xx..:....---------.:.:xx.:.:..---------------------.....x..:..x..:--...x.x:.:...::.x:x:.:x::...x.x.xx.....xx::xx:x.:x:xx..x:.x.....::......x......:.::......x::....:x..:..:...... 11M1I89M4D16M13I16M4I8M1I6M6I35M1I13M8I13M2D16M9D12M21D15M2I109M 223/359 62.1% 395/94230402 0.0% 72/359 20.1% 39887754 NA +9603 chr4 + 190214555 122730547 122730546 122730973 427 TAATAACGAGTAGTCTTTTTCATCACTCTCAAAACATCTTCCTCGTTTATTTCTCCATCTCTATCATGATCAGCTTCATCAAGCATTTCCTGTAAAACAAAATGTAAAT---------------------------ATATGAAATACATT---TAAAATGACATAAATGAAGTCAAACACATATT-------CAAAACCAA---ATTTTATTTTAAATGCATAAGTGCAAC--------------TAAAGTTAGAATTATAATCCTAAATTATCAC-ATAAGTTATAATTACATATAAATTATAATTATAAAAAT-------AAGCAAAATCTACCTGAAGTTCATCAT--GTTAAATTTTCCCCTGGTTTCTTAGCAAACCTCTTGATACCGGTTAGTATTATACTTCCAGTATCATCATCATCAAATAATTTGAAAGTCTTCAATATTTCTTCTTTTTCATCTTTTTTACTCTTTTAAAAAAGAAGCAA chr4 - 94230402 39055206 39055205 39055688 55174715 55174714 55175197 483 TAATATAAGCTCGTTTTCTTCATGATTCTCAAAAATTCTTGCTCGCTTACTTCTCCATCTCCATCTCGATCAGCTTCGTCAATCATTTCCTACAAAACATAGAGCATATCTGATCAGGCACTGGGCTTGACTCTAAACATAACACCTATTCATTAAAAAACAACAAATCAG---AAGTACTTATTAAGAAAACAGAACCCATGTATTTTTATTATTCTGCACATTTCTAACCTCTCAGCTCTTTCTACAGT--GCATGAATTTCCCACCCTGTCCTTAGGAACTCCAAGGACTGGTTCATTCTCACTGGGAAAGCTCTGGCAAGTCAGAACTTACCTGAAGCTCTTCATCGGTTAAATTTTCTCCCAGCTCCTTGGCAACCCTTTTCAAGTTTTTGAATGAAATCTTTCCTGTCCCATCATCATCGAATAATCTGAAAGCTTTCAGAATTTCTTCCTTTGAATCCTTTTCACTC---TAGAAGGAAAGTAA .....xx::x.x..:..:.....x.:........xx....x....:...:...........:...x:..........:....x........::......x.:x.:.x..---------------------------.:..:.x.:x:...---.....x:xx.:....x.:---..::..x....-------..:....x.---.....xx..xxxx....:.xx.x:...--------------..x...--.x..x.xxx...:.xx:.:..x:-.x:.::.x:..xx..xx:.xx...x.x.:.:x:...::-------.:x..:..::.........:..x....--...........:..::.:.:...:....x...:..x.x:::xx.x.:.:xx..x:....x..x:..........:......:......::....:x........:...xx...:....:....---..:..:::...:.. 109M27I14M3I18M3D11M7I9M3I27M14I6M2D23M1I38M7I27M2I123M3D14M 281/419 67.1% 483/94230402 0.0% 72/419 17.2% 83675341 NA +4193 chr4 + 190214555 122730818 122730817 122730969 152 ACCTGAAGTTCATCAT--GTTAAATTTTCCCCTGGTTTCTTAGCAAACCTCTTGATACCGGTTAGTATTATACTTCCAGTATCATCATCATCAAATAATTTGAAAGTCTTCAATATTTCTTCTTTTTCATCTTTTTTACTCTT---TTAAAAAAGAA chr4 - 94230402 82849691 82849690 82849847 11380556 11380555 11380712 157 ACCTGCAGCTCTTCATCTGTAAGGTTTTCACCCAGTTCTTTGGCTACACGTTTGAGGTTTTTGAAAGAGATTTTGCCAGTTTCATCATCATCAAAGAGCTTAAATGCTTTGAGAATCTCCTCTTTGGAATCTTTTTCAGCCTTAAGTTTAAGGAGAA .....x..:..x....--..x.::.....x..::...::..:..x.xx.x:....x:::xx.x.:x:xx..x:.x.....x..............x.::..:..x.::..x.:x..:..:.....xxx........:.x:...---..x..::.... 16M2I125M3I11M 98/152 64.5% 157/94230402 0.0% 5/152 3.3% 39881127 NA +6073 chr4 + 190214555 122731550 122731549 122731708 159 TATCATTTTTATACTCATAATGGCAAAAAAAAATCTTCAAAACTAATGGTGCCAATTCCTTCTTTATCAACTTCAGCTACCATTTTTTAAATTTCTTCTTTCTTTGGTTCAAATCCTAAGGCCCACACTGCAATCTGAAATAGGAAGAAAAGGAATTAT chr4 - 94230402 82850605 82850604 82850758 11379645 11379644 11379798 154 TACCATTTTCTGGGTCATCAC--CACCAAGAAGTCATTGAAGCTGATTTTTCCTGTTCCTTCCTTATCAATATCTGATATCATTTTCTTGATTTCTTCTTTCTTAGGTTCAAACCCTAAGGCTCTCATGGCCACCTGCAA---GGCCAAAAGAAATTAT ..:......:xx:x....x.:--..xx..:..:..x.::..:..:..xx.x..x:.......:.......:x..x.x..:......:.x:..............x........:........:.x..:x..x.:...x..---.:xx.....:...... 21M2D117M3D16M 110/154 71.4% 154/94230402 0.0% 5/154 3.2% 39880945 NA +7479 chr4 + 190214555 122731550 122731549 122731696 147 TATCATTTTTATACTCATAATGGCAAAAAAAAATCTTCAAAACTAATGGTGCCAATTCCTTCTTTATCAACTTCAGCTACCATTTTTTAAATTTCTTCTTTCTTTGGTTCAAATCCTAAGGCCCACACTGCAATCTGAAATAGGAAG chr4 - 94230402 39055786 39055785 39055930 55174473 55174472 55174617 145 TACCATTTTTTGTGTCATCATAGCCAAAAAG--TCTTCAAAGTCAATGGTGCCACTTCCTTCTTTGTCAATATCTGCGATCATTTTCTTAATTTCTTCTTTCTTTGGCTCAAAGCCTAAAGCACGCATCGCAACCTGTGCCAAAAAG ..:.......xxxx....x..:..x.....:--........:::..........x..........:....:x..x..x.:......:.x..................:.....x.....:..x.:..::....:...x:x:.::... 31M2D114M 110/145 75.9% 145/94230402 0.0% 2/145 1.4% 83675764 NA +6617 chr4 + 190214555 122732035 122732034 122732195 161 AGAAATAATTTCAGAACCTT-----CTTTTACATCGATGGTTCCAGACCCATCAATATCAAATAAATTAAAGGCGTCTTTAATTTCTTGCTTTTGGGATTCATTCAGTTCAATTTTTGCTGCTCTTTTCTTCCATTGGTCTGAACTTG---------TATGGTAGTTAGATGCCT chr4 - 94230402 39057688 39057687 39057862 55172541 55172540 55172715 175 AAAAAAGGTTTGAGAACCTTGAGTTCTTTTATATCAATGCTTCCAGATCCATCAGTATCAAACAAATCAAAAGCTTCTCTGATCTCCTGCTTTTGCTCTTCTGTAAGTTCGGGTTTCAAGCCGCTTTTCTTTCGCTGGGCTGTACTTAAGCCAGGTTTTCTATAGTTGGACGCCT .:...x::...x........-----......:...:...x.......:......:.......:....:...:..x...:.:..:..:........xxx...xx.x.....::x...::xxx.x........:.::...x...x....:---------.x:x:.....:..:.... 20M5I123M9I18M 116/161 72.0% 175/94230402 0.0% 14/161 8.7% 83674347 NA +46859 chr4 + 190214555 122741836 122741835 122744029 2194 CTATGAATTATACTGAA--TAAAGTTACAAGTTTTTATTTTGTTTGCAGATCATGATACATGGTGATGGCTTGCAGAGTCGTAAACAAAAGAAGACACATGGGACTTCAACAACTTTCATCATTCGCGGAAACAGGAAGAACTTTCCTAGGCCCACTAAAATCATCCAAATTTATTATAGATGAAGAATGTCATGAAAGTGTATTAATCAGTTCAACAGTAAGGCTTCTTGAAAGTTTGGATTTAACCAGTGCAGTGGGACAACTTCTCAATGAAGCAGTTCAAGCACAAAACAACACATATAGAACTGGAATCAGTACTCTTTTGTTTCTTGTTGGTGCTTGGAGCAGTGCAGTTGAAGAATGTCTTCATCTTGGTGTCCCCATTTCCATAATAGTATCAGTAATGTCAGAAGGCTTAAACTTTTGTAGTGAAGAGGTAGTTTCTCTTCATGTACCTGTTCACAATATATTTGA----CTGTAT--GGACAGCACAAAAACA---TTTTCTCAACTTGAAACATTTAGTGTAAGTT---TGTGTCC-TTTTCTACAGGTCCCTTCAGATAC-----TGATTTGATAGAGGAATTGCATGGTCTCAAAGATGTTGCCTCTCAAACACTGACCATTTCCAACCTTTCTGGGAGACCTCTTAAATCATATGAA----TTATTTAAACCTCAGACAAAGGTTGAAGCA---------------------------GATAACAACACATCACGAACTCTGAAAAACAGCCTGCTTGCAGATACCTGCTGCAGACAGTCAATACTAATCCACAGTAGGCATTTTAATAGGACAGATAATACTGAAGGGGTAAGCAAACCAGATGGATTTCAAGAACATGTTACAG--CTACTCACA-AAACTTACAGATGTAATGATTTGGTAGAGTTGGCAGTAGGCTTGAGTCATGGAGATCACAGCAGCATGAAGTTAGTAGAAGAAGCAGTACAGCTGCAATATCAGAATGCTTGTGTGCAACAAGGCAACTGTACAAAACCATTTATGTTTGACATTTCAAGAATTTTCACTTGCTGTCTACCAGGCTTACCTGAAACTTCTTCTTGTGTTTGTCCAGGATATATCACTGTTGTGTCAGTATCTAATAATC--CTGTGATCAAGGAATTGCAGAATCAGCCTGTGCGAATAGTTCTCATTGAGGGTGACCTCACAGAGAATTACCGCCACCTGGGATTTAATAAGTCTGCAAATATTAAAACAGTATTAGATAGCATGCGGCTTCAAGAAGACAGCTCAGAAGAACTGTGGGCAAATCACGTGTTACAGGTGTTAATCCAGTTCAAGGTGAACCTTGTCCTGGTACAAGGAAATGTGTCCGAACGCTTAATTGAAAAATGTATAAACAGTAAGCGGTTGGTAATCGGCTCAGTGAATGGCAGTGTGATGCAGGCTTTTGCAGAGGCTGCAGGAGCAGTACAGGTGGCCTACATTACACAAGTGAATGAAGATTGTGTGGGCGACGGGGTCTGCGTGACCTTCTGGAGAAGCAGCCCTTTGGATGTTGTAGATAGGAACAACAGAATCG--------CAATCTTATTAAAAACAGAAGGAATTAATTTGGTTACGGCCGTGCTCACTAACCCAGTTACTGCACAGATGCAAATCAAAGAAGATAGGTTCTGGACATGTGCCTATCGTTTGTATTATGCTCTAAAAGAGGAAAAGGTCTTCCTTGGAGGTGGTGCAGTTGAATTTTTGTGTCTTAGCTGTCTTCATATTCTTGCAGAGCAATCTCTGAA---AAAAGAAAACCATGCCTGCTCAGGGTGGCTGCATAATACTTCCTCTTGGCTGGCTTCATCTCTGGCAATATACAGACCAACTGTGCTTAAATTCCTGGCAAATGGATGGCAGAAATACCTTTCAACTCTCCTATATAACACTGCCAATTACTCATCAGAATTTGAAGCCAGCACATACATTCAACATCATCTGCAAAATGCCACAGACTCTGGCTCTCCTTCATCTTACATCTTGAATGAATATAGTAAACTAAATAGTAGAATTTTTAA-------TTCAGACATTTCAAATAAACTGGAGCAGATTCCGAGAGTTTATGACGTTGTTACACCAAAGATTGAGGCGTGGCGCCGAGCATTGGATTTAGTATTGTTAGTACTTCAGACAGACAGTGAAATAATTACTGGACATGGACACACACAGA---TAAATTCACAGGAATTAACGGGCTTTCTATTTTTGTAGTGTT chr4 - 94230402 39061238 39061237 39063448 55166955 55166954 55169165 2211 CTCTGGACTACTCTGAGGGTGGAACAGTAAGTTTGTGTTCTGTTCCCAGATGCTGCACACTGGCCATGGCTTTCAGGGCTGTGAATTCAAGAAGACATATCGGACTCCAGCAGCTCTCATCCTTGGCGTGGGCTGGACGAACGTTATTGGGACCAATGAAAGCCTGTAAATTTGTTGTGGATGAAAGCACCGATGAAAGCATGTTGATTTGTTCTGCTGTTAGACTGATGGAAAGTTTGGATTTAACTAGTGCTGCTGGACAGCTTCTTAATGAAACCATTCAGGCCCAAAGCAAGGAATTTAAAACCGGGATGAGTACCCTGTTATTTCTTGTTGGTGCATGGAGCAACGCCATACTGGAATGCCTCCAGCAGAACGTTCCTGTTTCAGCAATAGTATCTGTGATGTCTGAGGGGTTGGACTCTTGCTGTGAGAAAGTCCAGTGTCTTCAAGTATCAGTACATGATGTAAACAAAGAGCTGTGTTCTAGCAGTGTTAGGCCAAGCGCTTCTGAAAGTAAAGCTTCC----CAAATTCCATGTGGCAGTTCTCTAAA----TCGTCAGATTTATCTGTGTTTTCAGAAAGATATTTC-TGCATCAGAAGAACTTG--TTCCAAGGAATTCTTATTTCC-----CTCAGGAAGCTGATTGTAATTTTAATAAGGGCCTGGTTTGGCCTTTGGCCAGCTTTGGTTCAGTAGCTTCCCTTGTCAGGTCAGTGGATGATGGAAGTACATCTGTGATTTCTGGAAGTGGTGTCTCTGCAT---CCATCTGTAAACAAAAAAAGTTAACTCACAGCAGATACTTCAGCCCTGGAGCAAAAAGCCATGTTTCAAGTCACCTAGGTGATTCTCAGGTATACCTCTCAGGACAGTCAGCATATACTTGTGAATGTTACGGGTTAGGACACCTGGCAATGGCTCTGAGCCATGGAAGTCAGCCTAGCATGAAACTGCTTCAA-----AGCATTGTTGC-GTATCAACACGAGAGAGCAGAATGTAGTGGCTCTTC----CCA-----GTTCAGTATCGCAGAAATTGCAACATGCTGTTTACCAGGTCTGCCTGAAAGTTACTCTTGTGTTTGCCCAGGTTTTGTCACTCTCGTGTCACCA--GAACAAGCCACAGTTATCAAACACTTTCAGGACAAATCCCTTTGGATTGTGCTAATGGATGGTGACCTCACTGAGCAATATCGTCACTTAGGTTTCACTAAACCACGGAATGTAAAGACCATATTGGAGTATCCTAGCCTACAGGAAGGTGGATCGAGAACCTCGTGGCTAAGCAATATGTTAGATATTCTAATAAGCTTGGAAGTAAACTTGGTTTTGGTCAAAGGAAATGTGTGTGAAAACTTAATGGAAAGATGCATTGCAAACAATGTATTGGTAATTAGTTCTGTGACTCAGAATGTGTTGAGTGCCTTTGGGGAGGTGACCGGTGCCCAGCCCGTGACGTACCTCACTCAGCTGAATGCTTCTTGCCTGGGGAGCGGGGTTCGGGTGGAGCTGTGGAAGGGCTGCGATGAGCGTGCAATGG--------AACTGGGTCAGCTTGTGCCAGTCAGGATAAAAGTGCAAGGAATTCCCCTGCTCACGGCTGTGCTCACCACCGCTGTAGCTTCAAAGATGTGTCTCATTGAAGACCAATTTTGGACTTTTGTGTATCGACTCCATCACGCTTTAAGGGATGGGAAGGTTTTTCTTGGCGGTGGTGCGGTTGAGTTCTTATGTCTTAGTCACAGTCAGATGCTTGCAGAGCAGTGTTTAAAGCTAGCAGGTAAAAATG-CTGCGAAGG--AGTTCCGTAGT------CCTCAGCTGGCAGCATCTTCGTCAGAGTATAAAGCAGTTGTGCTTCAAGCACTAGCCACTGGCTGGAGCCAGTATCTTTCCGTGGTTATGTGTAACGCTGCAAAAACAGCATCGGAGTTTGAAGCGCGTACCTTAATTGATCATCACCTCCAAAAAGCAGCTGACTGTGGCTCTCCCTCAGCGTATGTACTGAAAGAGTTCAG------AAGAGGCAGTATGTTCAGGGGTTGTTCTATTCCTTTCACTGACAATGAAG-AGGGTGTAAAGGTTTATGATAATGTTACAGCCAAGATGGAGGCGTGGCGGAGAGCTCTGGACTTGGTGCTGCTGGTGCTTCAAACAGACGCTGAAATCATCATAGGTCCCAGAAGGAGTCAGCTATTAAACTCACGTTCATCGAGTGAATTTATGTTTTTGTAGGGCT ..x..:.:..:x....:--.::.::x::......x.:..:....:x.....xx..xxxxx...:x.......x...:.::..:..:xx.........:..x.....:..:..:..:.....x..x...x:::.x...x....x..x:.:..x...x.:...x.x.x:......:..:.:......::xxx:x.......::.:..:..:x....x:.x..x..:..xx.x.................:.....x.:x.....:.....:......:.x:....:..x....:...x:x..x..:...:..:..x.....:..x..:..............x.......::..x:.xxx:.....:..:..x.xx:::..:..::....x::.........x..:.....x..:..x..::...:...:x....::.:..xxxx.x......x...:.x..x..::..:..xx::.----....:.--x::...:::x.::x..---x:....x..xx.:..:.x.::----:..:..---....x.x-..:....x.----:.x......x:-----..x...x.x.:..:x...x.-..xx::x:....xx...--.::...:x.x.xx::......-----:..x..:..x:xx:.xx...:x..xx..----:.:x..x::...:x.:.x.:xx...:xx..---------------------------...::x.::.....xxx:.:.::x::..:::.:x.x::....x---..xx...:.:...:xx..x::...::.....:..::.:..:.::xxx:x..xx..x.x:x.x.xxx:...:x.x.:..:..:x.:...:.x.:.:x.:x...--.x:::x:..-.x....::::....x.:.:x..:.x.x.x:.....:.:.x::....:......::...xxx:........::.:x.xx..-----..:.:x.:...-:.....:x.:.xxx.x.::x..::x:.:::..x.x.----...-----...::::..:x..::....x:x..x......:.......::.:.......x..x:...........:.....x.x.:.....x.:......x:.--x..:..x.--.x..x.....:x.x..x...:.:x.::.:x.x:.:..x..x..x..x..x...........x...x.x..:..:...:.:..x..:.x...::.xxx:...:.x..:..x:....:..xx::x:xx.x..x..:....:::.x..:::.:xx::....x:..::x.::.....x.x:.x:....xx:x..x:.:..:...:.x..::....xx............x:...x:......x....:...:..x:xx.::..xxx:........::.:..x....x.x:x.:....x..x:x..:....x:....:x:.x..x..xxx:.xx...:.x...x.:..x..:x......xxxx...:x....x::......::.x...:xx:.x....:::..x..xx.xx.x:..:x:.:.--------...x.::..:--------..:..xx:x.....:::x........xx::..x.:.....:........:.x.x.x..x:..x..x.....::xx...xx.....:x::..:.....x.x..:x.....x:.x:..:.:...:...::..x.::.....:..:.....x........:.....:..:..:........::::xx...x..x...........:.x.:.:..---.:x..:x..xx...-....xx...--:.:.x.:..:.------:..::......xx.....::.x..:x:..:.:.x..::.......x..x:x..:..x.x...x...x:xx.:..:.....x::xx.:x.:.:....:....x..xxxxx....:..:........xx.:..x.xx...x.x.....:..x.....x..x:.x....x.........:...x.x..::.x:....x..:.x:..------..:x:.:..x..x..:.:-------.::.xx.x.....xxx.x.x..:..-..:x.x::.::........::x.......x.x.....x...........xx....x:....:..:..::..:.:..:.....:......:x......x..:.:x..x.x::..x:x.xx...x---....:....:xxx..::.xx.:x...x.:.........x.:. 17M2I456M4I6M2I16M3I21M4D6M3I7M1I9M4D11M5I20M1D17M2D21M5D28M4I30M27I43M3D102M2I9M1I80M5D11M1D36M4D3M5D94M2D8M2I417M8D10M8I211M3I14M1D9M2D11M6D203M6D18M7I25M1D123M3I42M 1314/2134 61.6% 2211/94230402 0.0% 137/2134 6.4% 83680598 NA +3435 chr4 + 190214555 122763502 122763501 122763563 62 AACCACTGACATGTACTTTGG-GTTTTTTTGTTGTTGTTTTTTGTTGTTTTTTTTTTTTTTGA chr4 - 94230402 60385928 60385927 60385990 33844413 33844412 33844475 63 AAACACTGATTTATATATTGTTGTTTTTTTGTTGTTGTTTTTTGCTTTTTTTTTTTACTTTGA ..x......:x.:..:x...x-......................:.x.........x:..... 21M1I41M 51/62 82.3% 63/94230402 0.0% 1/62 1.6% 62377574 NA +3074 chr4 + 190214555 122763522 122763521 122763563 42 GGTTTTTTTGTTGTTGTTTTTTGTTGTTTTTTTTTTTTTTGA chr4 - 94230402 80532380 80532379 80532421 13697982 13697981 13698023 42 GGTTGTTGTGTGGTGGTTTTTTGTTGTTTTTTTTTTTTTTGA ....x..x...x..x........................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 42231142 NA +3202 chr4 + 190214555 122771358 122771357 122771428 71 TGCACTGCAGCCTGGGCGACAGAGCAAAATTCCATCTTAAAAAAAAAATAAAACAAACAAACAAACAAAAA chr4 - 94230402 81661581 81661580 81661641 12568762 12568761 12568822 61 TGTAATGCTGTCTGGGCTTC----------TTTATCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAA ..:.x...x.:......xx.----------.::...:.x.........:...................... 20M10D41M 50/61 82.0% 61/94230402 0.0% 10/61 16.4% 41109777 NA +3000 chr4 + 190214555 122771394 122771393 122771434 41 TTAAAAAAAAAATAAAACAAACAAACAAACAAAAACCTAAA chr4 - 94230402 15215971 15215970 15216011 79014392 79014391 79014432 41 TTAAAAACAAAACAAAACAAGCAAACAAAAAAAAACCCAAA .......x....:.......:........x.......:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 107555423 82659132 +3072 chr4 + 190214555 122783220 122783219 122783269 50 TTTCAAAAAGGAAAGGGAAAGGGAAAGGGAAAGGAAAGGAGAAAAGAAAA chr4 - 94230402 43002940 43002939 43002989 51227414 51227413 51227463 50 TTCTAAAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAGAGGA ..::......:...::.:..:..:..........:..:.:.......::. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 79780280 NA +3328 chr4 + 190214555 122815224 122815223 122815286 63 AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAATAATGCATTTAAAAGAAGAAACCAATTTTAG chr4 - 94230402 14820701 14820700 14820763 79409640 79409639 79409702 63 AAAAAGAAAAAAAAAAGAGGAAGAATAAGAAACTATGCATGCAAAGGAATGACCTCATTTTAG .....:..........:..:..::.x......:x......x:...:...x:.x.:x....... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 107994523 82220032 +4919 chr4 + 190214555 122827287 122827286 122827397 111 GCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGGGTCCGGGAGAAGAGCGACCCTCACAGTGAGTGCCGACCCGCTCTCTCCGCCTCATTTCCATTTCGTGGGT chr4 - 94230402 39090685 39090684 39090786 55139617 55139616 55139718 102 GCTTCTTCCTGCGCATC-ACCCCGACGGCAGGGTGGACGGCCTTTGCGAGAAGAGCGATCCGCACAGTGAGT---GGCCCG-----GCCGCCTCCTGCCCGTGCCGCGCGT .................-...........x.:..x.....xx.::.x...........:..x..........---.:....-----x.......x.x:..:.x:..:.x.. 17M1D54M3D6M5D25M 82/102 80.4% 102/94230402 0.0% 9/102 8.8% 83736602 NA +3483 chr4 + 190214555 122844467 122844466 122844610 144 CACAA-ATACTCTTGATGGCAT-CTAGAATTGTCAGTTATTTCCAGAAGGTTTTCTTTCTTTCTTTTTCTTTTTTTCTTTCTTTCTTTCT--CTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTC chr4 - 94230402 18988766 18988765 18988902 75241501 75241500 75241637 137 CACAATAGACTGTTCCTAGCATGCTGAAATTGTCACTT-----------GACCACTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC .....-.x...x..xx.:....-..::........x..-----------.x::x...:x..x::::..x.x....x......:.xx.:..--:............:............x...x.xx.:.:.x:.....x:..x..x.. 5M1I16M1I15M11D41M2I56M 93/133 69.9% 137/94230402 0.0% 15/133 11.3% 103855701 86358854 +3972 chr4 + 190214555 122844515 122844514 122844652 138 TTTTCTTTCTTTCT--TTTTCTTTTTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTC-----------CTTCCTTCCTTCCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCTTTTT chr4 - 94230402 45185593 45185592 45185743 49044660 49044659 49044810 151 TTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT .....::....:..--.:.:xx....:.x:...x........:..:..::x.:....x::..::..........xx::.....:.:::..-----------..:x..x.:.x:......xx.:x..::.xx..::..x..::.....:... 14M2I74M11I50M 88/138 63.8% 151/94230402 0.0% 13/138 9.4% 77658922 NA +3334 chr4 + 190214555 122844520 122844519 122844652 133 TTTCTTTCTTTTTCTTTTTTTCTTTCTTTCTTTCTCTTTTTCTTTCTTT----------CTTTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTT----------------------------------CCTTCCTTTCTTTCTTCCTTTCTT--CCTTTCTTTCTTTCTTTTT chr4 - 94230402 19053884 19053883 19054062 75176341 75176340 75176519 179 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTCTTCTATTTGCCCTTCCTTCTTTGTTTTT ..:...:...x.:.:.:x..xx......:x..:...........xx...----------......:.....:.x:...x.x..::x...x:.xx..x...----------------------------------.x..x:......x....:.:.x..--..:...:......x..... 49M10I41M34I24M2I19M 95/133 71.4% 179/94230402 0.0% 46/133 34.6% 103790636 86423919 +3136 chr4 + 190214555 122850600 122850599 122850658 59 AGGGAAAGGAAGAAAGAGAAAAAAACAAAAACAAAATAAAGTGAGAACAAGCAAGAGAA chr4 - 94230402 10856122 10856121 10856180 83374223 83374222 83374281 59 AAGGGGAGGGAGAAGGAGAGAACAACAATAACAAAACAAAACAAAAACAAACAAACAAA .:..::...:....:....:..x.....x.......:...:::.:.....:...:x:.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 111994478 78220077 +3207 chr4 + 190214555 122865209 122865208 122865297 89 TGAGTTTTCATTATCATAAAACTAGAAATATTTTCTAAATTTCTTTGTGATTTATTTTCTCTGTTTTTTTTTGTTTGTTTGTTTGTTTT chr4 - 94230402 25907698 25907697 25907786 68322617 68322616 68322705 89 TAAGTTCTCGCTGTGATGAAACCGGGTCATTTGTCAGGATTGCTGGACAGTTTCTTTTTCATGGTTTTTGTTGTTTGTTTGTTTGTTTT .:....:..::.:.x..:....::.:xxxx..x..x::...x..xx::::...x....::x..x.....x................... 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 96957511 93257044 +7810 chr4 + 190214555 122876306 122876305 122876439 134 TTTTTCCCGTT----ACAGTCAAGCTACAACTTCAAGCAGAAGAGAGAGGAGTTGTGTCTATCAAAGGAGTGTGTGCTAACCGTTACCTGGCTATGAAGGAAGATGGAAGATTACTGGCTTCTGTAAGCATACTTTCT chr4 - 94230402 39109779 39109778 39109916 55120487 55120486 55120624 138 TTTGTCCTGTTTTTCACAGTCAAACTGCAGCTTCAAGCAGAAGAAAGAGGAGTAGTATCAATCAAAGGCGTAAGTGCAAACCGCTTTCTGGCTATGAAGGAGGATGGCAGATTGCTGGCACTGGTAAGCAGCATTTCT ...x...:...----........:..:..:..............:........x..:..x........x..:x....x.....:.x:..............:.....x.....:.....x::x.......xxx..... 11M4I123M 108/134 80.6% 138/94230402 0.0% 4/134 3.0% 83766527 NA +36672 chr4 + 190214555 122892193 122892192 122893314 1122 TCTTCCTTTATTTTTCAGAAATGTGTTACGGATGAGTGTTTCTTTTTTGAACGATTGGAATCTAATAACTACAATACTTACCGGTCAAGGAAATACACCAGTTGGTATGTGGCACTGAAACGAACTGGGCAGTATAAACTTGGATCCAAAACAGGACCTGGGCAGAAAGCTATACTTTTTCTTCCAATGTCTGCTAAGAGCTGATTTTAATGGCCACATCTAATCTCATTTCACATGAAA---GAAGAAGTATATTTTAGAAATTT-------GTTAATGAGAGTAAAAGAAAATA---AATGTGTATAGCTCAGTTTGGATAATTGGTCAAACA---ATTTTTTATCCAGTAGTAAAA----TATGTAA--CCATTGTCCCAGTA-------AAGAAAAATAACAAAAGTTGTAAAATGTATATTCTC----CCTTTTATATTGC-ATCTGCTGTTACCCAGTGAAGCTTACCTAGAGCAATGATCTTTTTCACGCATTTGCTTTATTCGAAAAGAGGCTTTTAAAATG-TGCATGTTTAGAAACAAAATTTC---TTCATGGAAATCATATAC---------ATTAGAAAATCACAGTCAGATGTTTAATCAATCCAAAAT------GTCCAC---TATTTCTTATGTCATTC--GTTAGTCTACA--------TGT---TTCTAAACATATAAATGTGAATTTAATCAAT-TCCTTTCATAGTTTTATAATTCTCTGGCAGTTCCTTATGATAGAGTTTATAAAACAGTCCTGTGTAAACTGCTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAAACCCTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGGGAGTTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCATCCACTCACATCTTAAGCATTCTTCCTGGCAAAAATTTATGGTGAATGAATATGGCTTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGCCGAATACTCAGGACGGACCTGAATTCTGATTTTATACCAGTCTCTTCAAAAACTTCTCGAACCGCTGTGTCTCCTACGTAAAAAAAGAGAT-------GTACAAATCAATAATAATT--ACACTTTTAGAAACTGT--ATCATCAAAGATTTTCAGTTAAAGTAGCATTATGT chr4 - 94230402 39115208 39115207 39116396 55114007 55114006 55115195 1189 TTTCTTTTTCTCTTTTAGAAATGTGCAACAGAGGAATGTTTCTTTTTCGAGCGCTTGGAATCTAATAACTATAACACTTACCGGTCACGGAAGTACTCTGATTGGTATGTGGCACTGAAAAGGACTGGACAGTACAAGCCCGGACCAAAAACTGGACCTGGACAGAAAGCTATCCTTTTTCTTCCAATGTCTGCTAAAAGCTGATTTGCATGGCGGATCCTGAACATATGCCACACTACACTTTAAGAGGTAGAATTTCCTACTCCTCACCAAACTAGTAAAAATAGAAGCAGTTATTTGCTGTTATCAGCTACTTTTGCAGAAAGATTAAAACATGAATGTTTCTTCCTGTCTTCATACTGCTCTGTAAGCCTATTGTGCCAGTGTGTGTGGAGGTAAAATTAC-------GTAGAGAATCTATTTTCAGGATCAATAACACTTCTATTTTCTGCTA------GAGATTTCTATAGAGCTATTTTATTTACTTTATATTCACTTTATGGAGTAAAGGGAAACTAATCTGATGCACGCTAACAGGAAAACTTGCCATTTAAAATAATTTATATATCTGTAGCTTATTAGAGAATAAATACTGATTTTTTTTTCTTCCCAAAAATAAGAAGTCCATGAATAATTTTAATATGATCTAAGTAACTCTACAATAAAAACTGTAAATTATTAATATAATCATGTGAAATTTGTTGCTATCATGTAATGTTTCTGTAGGATTCAGGCAGCTCCCTGTGGTATAGTTTGTAGAAGAGGCCTGTGTAAACAGCTGGAAACTCTCTCATGGTTATATCAATTTTATCAAACCCTTCCCGGTATCCGTAAAGTAACAGCTTAGCTACGTTGCTCGTGATGGGAGTAGCATGTTTTGTCCTGGCAAGCTCATCGAGGTCCATCCACTCACACCGCAAGCACTCCTGCTGGCAGAAGTTGATGGTGAAGGAGGAGGGCTGCAGGCGACAGATGATGTACATGTCTGACTTCCCAAAGGCTCCGGGGTGTTTGTGTTGCTGTCTTATGCTTAGGATGGACTTGAACTCTGACTTGATGCCAGTCTCTTCAAAAACCTCTCGAACTGCCGTGTCTCCTAGGCAAAGAGAGCAATTCTTTCAATACACA-CAAGAATAGCTAAACACTCTTTAAACCTTTTGATCACAGAACATTTCTAACTCAAAGCGTCTTCTGT .:.:::...x.:...:.........:x..:..x..:...........:..:..x.................:..:............x....:...x.:::...................x.:.....:.....:..:.::...:.x.....x........:...........x.......................:.........xx.....x:xx:..:.x.x:..x:....:x.x.---x....:...x.x...xxx.x.::-------::..:.:.:.:..:...x.:x..---:x...xxx:....xxx....x.x..xx:x.x.....---..x...:x...x..xx.x.x.----.x.....--.:.....x.....:-------.:.x.....x..-------...:.:x:.x....:..----:.xx.x.:.:.x.-..:.x...:..------..:::..x:x......x..xx.x...x::x:::...::......xx::x..::..xxx:...xx..-....:.:.x.x.::x...x..x.---..x.x:x..x.:.....:---------......:...x.xx:::::x.x...xx..xx:......x------.....:---..x..:.x..:.x..::--..x.x......--------...---..x.x..:...xxx.......x..x:.::x.-..x.x.x..:x..:.:..:xx:..x.....:...:.:..:..x.....:..:..x..x...........x.......::...::..::..:.x:........:...........:.x...:..:..x..:.:....:....x..x:....x...........x.:..x..:x...:.x..x..x....:...:..............:.x:.....:..:.x......:..:..x........x..:x.x....x:.....:........:.....:..............:.....:..:.x.x....:..:..:.xx..:..:....:....:....:.....:..x..:.................:........:..:..........x.:...:.:..x:..-------:....x.-...x....::.--.....:..x:..x..x.--....:x:..x....::.::.x..:xx.:x..x... 240M3I23M7I23M3I36M3I21M4I7M2I14M7I12M7D17M4I13M1I11M6D66M1I23M3I18M9I39M6I6M3I17M2I11M8I3M3I31M1I407M7I7M1D11M2I17M2I35M 777/1108 70.1% 1189/94230402 0.0% 95/1108 8.6% 83776985 NA +3068 chr4 + 190214555 122897618 122897617 122897701 84 ACACACCAATATCTTCTTCAGGCTCTGACAGGCCTCCTGGAAACTTCCACATATTTTTCAACTGCAGTATAAAGTCAGAAAATA chr4 - 94230402 39118859 39118858 39118940 55111463 55111462 55111544 82 ACTTACCAATGTCTTCGCCAGGATTAGACAGACCTCCTGGGAATTTCCATCCATTGACGGTCTGCATTGGAGAA--AAAAAATA ..x:......:.....x:....x.:x.....:........:..:.....:x:...xx:x:x.....x.:x.:.:--.:...... 74M2D8M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 83778759 NA +3416 chr4 + 190214555 122904545 122904544 122904614 70 CTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTTGGATTACAGGTGCATACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.::........:.x...x.xx.x.........:.........x.:.:....x....--.....::.. 59M2D9M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 104707406 85507149 +4658 chr4 + 190214555 122912545 122912544 122912662 118 TTTATAAAACAGAAGCAG-CTTACTTTATTTCGATCTTGTACAACCAGTATTTTTCTAGTACTTTCATCAAATACAGCTCCTATTAGGGGAAAAAGAAAAGATAATTGAGAAATATTAA chr4 - 94230402 39122128 39122127 39122238 55108165 55108164 55108275 111 TTTACAACCCTGTAGCAAACTTACCTTATTTCTGTCTTGTACGACCAGCACCTTCCCACTGTTTTCATCTAATACAGCACCTATTGGAGAGACAAT--------ATTGAAAAAGACTAA ....:..xx.x.x....:-.....:.......x:........:.....:.::..:.:.x.::.......x........x......:.:.::.x..x--------.....:...x.:... 18M1I77M8D15M 81/110 73.6% 111/94230402 0.0% 9/110 8.2% 83790417 NA +7935 chr4 + 190214555 122917491 122917490 122917722 232 TGAAACTGACCTGCAACTCCTACTTGATGTGAAGCATATCCTGGTAATCTGCTGGGCCCTTCTCTCAGCCACAGAGTCAACGTTGATGAATCCGATTCTGCGTGGTGAAAGCAGAAGCCCAGGGAAGCAGCAGGGGCAATAAATCGGCTTTGGAGGATGGGAATGTGCAGCCATACAGCTGTTCTACCTTCTGATCGCCATTGCTGTACTGCAGCTAAATGCAGAAGAAAAA chr4 - 94230402 39126564 39126563 39126789 55103614 55103613 55103839 226 TGCGACTCACCTGCGACTCCCAGCTGGTGGCTGGCAAAGGCGGGCAGCCTGCTCGGCCCCTCGCCCAGCCACCGCGTCAGGGTGGCCGAGCCCGACTCCGCGTGGTGGAAGGCAAAGCCCTGCGACGCGGCCACGGCCGCCAGCCCGCTCTGGAAGATGGGAACGTGGAGCCAGACGGCGACCCGGCCTTCCTGCTGCCACTGGGCGACCGAGGCT------GGAAGAGAAA ..x:...x......:.....:.x:..:..xxx:...x.xx.x..:.::.....x.....:..x.:.......x.x....:x..x.x:..::....:..:........:...xx:......x.x..x..:..x:x...x::x.::.x...:....:........:...x.....x..:..x:::.x:.....:x:::....:..xxxx..:.x:...------:.....:... 216M6D10M 147/226 65.0% 226/94230402 0.0% 6/226 2.7% 83790927 NA +3606 chr4 + 190214555 122919292 122919291 122919374 83 CTGCAACCTCTGCTTCCTAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x:.:..:........:.x...x.xx.x........::.............:....x....--:....::.. 72M2D9M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 104722166 85492389 +3089 chr4 + 190214555 122921581 122921580 122921653 73 ATGATACCCTCTCTCAAAAAAAAAAAAAAAAAAAAAAACAAACTGTACATTTAAAAATAACTAAGAGTAACTG chr4 - 94230402 25222976 25222975 25223048 69007355 69007354 69007427 73 ATGTTATCCACCAGAAAAAAAAAAGAAAAAAAAAAAGAGGACTTGTACAGGTAAAAGCATTTGAGGGTATCTG ...x..:..x.:xxx.........:...........:.x:.x:......xx.....::.x:.:..:...x... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 97698605 92515950 +6732 chr4 + 190214555 122929037 122929036 122929203 167 CAGGTGTATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGAAATGGCACAGAAAAATGTGGGTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGCTGTGCTACAGGCTGAGGAAATGGATGTGGCACTGAGGTTTGG chr4 - 94230402 39128968 39128967 39129134 55101269 55101268 55101435 167 CAGGTCTGCACAGCCTGGCCCACCCCAGGCTTTCCAGGTGGGAAGATTGGGCTGAGCGACACCACACAGAAGAACCTGGGAGTCAGTGTGGGTGATGCCGTCACCGTGCAGCCCGTGACCGGTGCGGTCATCCAGGCAGAGGAAGTTGCTGTGAAGCTGAGGTATGG .....x.::...........:.:xx....x.....x..x..x...:.:..x.....:..x.:x:.......:..:x....x..x..xx:x.........:..xxx..x.....:x.x::x.....x..xx.x.....x......:.x.x....:x:.......x... 167M 116/167 69.5% 167/94230402 0.0% 0/167 0.0% 83800069 NA +13471 chr4 + 190214555 122934095 122934094 122934746 652 AGATGGCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTACATTCTATGGACGACCGTACAAGCTGCAAGTATTGCGAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGCCTCAGAGTGACTC---TGACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAGATCTGGA-GGATACCCAGATCCCAACATCAAGAAGTACTCCTTATAAACCAATTGATGACAGAATTA--CAAATAAAGCCAGTGATGTTTTGCTGGATGTTACACAGAGCCCTG------GAGATG------GCAGTGGACTTATGCTAGAGGAAGTCACAGGTCTTAAATGTAATTTTGAATCTGCC----AGAGAAGGAAATGAGCAACTTACTGAAGAAGAGAGACTGCTAAAGTTCAGCATAGGAGCAAAGTGCAATACTGATACTTTTTATTTTATTTCTTCAACAACAAGAGTCAATTTTACAGAGATT--GATAAAAAT-TCAAAAGAGCAAGACAACCAATTCAAAGTAACTTATGACATGATAGGAGGATTAAGTAGCCAGCTGAAAGCAATTAGAGAAATAATTGAATTGCCCCTCAAACAGCCTGAGCTTTTCAAGAGTTATGGTATGATG chr4 - 94230402 39132953 39132952 39133586 55096817 55096816 55097450 634 AGATGGGAAAGTTGTTTTACCAGAAAATCTCCTGGCATTCAGTTTCTATGGCAAACTGTGTAACGTTGTGGTGATGAAGGTGAAGGGGACTGACAGTGTGGAGCTGCATG---CCCAGGCTGGTGCAATTTCCAGCGAGGTGTGTGAGCCAGACCTGGAGAAATCTGACTTGGAGATGAGCGCGCTGGATCTTTCCTTACAGCTCAGCAGGATGGACATTGATGAAGATCCAGAGGCTG-CATCTGCGAGCACTCCATGCAAACC--TGCGTGTCTGGGTTCACCAGTTACACCCAGTTCTGCTGTGGCAGCCACTGGTCAAGGCTCTGCTCAGGGAGATGAAGCCAGCAGCAGG---------GAGGATGCTGCAGACCT-------------GGAGCTGCCCAGGAAAGGGGGCAGTGAGGGGCTTCC--------ATCGGCTGCCAAACCT-------GGAGCATTCAGCAGCACAGACACTTTTTATTACATTTCTTCAAGAACTAGAATCAATTTTATAGAAGCTAGGATGAACATAGCAGAAGATAGTGATCATGGACCACAAGTTACCTATGACATGATAGGAGGTTTAAGCAGCCAGCTCAAAACCATTAGAGAAACGGTTGAACTGCCCCTGAAGCGAGCTGAACTGTTCAAGAGTTACGGTACGATG ......x..::............:x..::.:...xxx.x:.xx........xx:..:..::..xx.xxx:..:x..x::.....:...:.x..::.::..:x::..x:x.---.:...:x..::x.---.xx..x:..x.:x::x:::x::.x.:.x..:x.:..:::.x....:.:x..::xx.....x:.x...........x...x:.x.:..:x.x..-.:.x.:.....xx.::-....x:x:..:.....x.::.....--.xx:..x.x.::..x--..:x..x.x.....xx..:.x..x::.x:::.:xx..::..:...------......------....::.:---------.....x.:::...::..-------------.:.x.....----.:..::..x.:....x::...x.--------.xx.:....:...x:.-------......xxxx...::..x..:..........x:..........x...x...:.........:...:::.--...:..x..-x..:....xx:x..:x.:x:.::xx....x..:.................x.....:........x...:.x..........:::.....:.......x..:.::x....:..x...........:....:.... 110M3D13M3I93M1I16M1D25M2D15M2I45M6I6M6I8M9D17M13D9M4I23M8D16M7D69M2I9M1I135M 389/609 63.9% 634/94230402 0.0% 68/609 11.2% 83801142 NA +8316 chr4 + 190214555 122935712 122935711 122935852 141 AGGAATTCCTGCCCCTAGAGGAGTGTTACTTTATGGTCCTCCAGGTACTGGAAAAACAATGATCGCCAGGGCTGTTGCTAATGAAGTTGGAGCCTATGTTTCTGTAATTAATGGTCCTGAAATTATAAGCAAGTAAGTACA chr4 - 94230402 39135676 39135675 39135816 55094587 55094586 55094727 141 AGGAATCTCACCTCCTAGAGGAGTGCTGTTGTATGGCCCTCCAGGTACCGGGAAGACCCTAATTGCCAAAGCCATCGCAAATGAGGTTGGCGCCCACGTAACTGTTATTAATGGTCCTGAAATAATAAGCAAGTAAGTCCA ......::.xx.:............:.::.x.....:...........:..:..:..xx.:..:....::..::.:..x.....:.....x...:.:..xx....x.................x..............x.. 141M 109/141 77.3% 141/94230402 0.0% 0/141 0.0% 83800036 NA +5035 chr4 + 190214555 122936075 122936074 122936168 94 TTTAAATGTATTTTATTTGTTACAGATTCTATGGTGAGACTGAAGCAAAGTTACGTCAGATATTTGCTGAAGCCACTCTACGGTACTCTTTATT chr4 - 94230402 39136446 39136445 39136537 55093866 55093865 55093957 92 TTTAAATGT--TTTAATTATTATAGGTTTTATGGAGAATCTGAATCAAGATTACGTCAGATATTTGCCGAAGCTTCTTTACGGTATGTTCTTTT .........--....x..:...:..:..:.....x..:x.....x...::.................:.....:x..:.......:x:.:.x.. 9M2D83M 72/92 78.3% 92/94230402 0.0% 2/92 2.2% 83799629 NA +9583 chr4 + 190214555 122938099 122938098 122938256 158 GATTTCATTTTACTTGTTTGTTTTTAGACACCCATCAATTATTTTTATTGATGAGCTGGATGCACTTTGTCCGAAAAGAGAGGGGGCCCAGAATGAAGTGGAAAAAAGAGTTGTGGCTTCACTCTTAACACTGATGGATGGCATTGGTTCAGTAAGTA chr4 - 94230402 39137349 39137348 39137506 55092897 55092896 55093054 158 GGTTTTTTTCCTATTTTTTTTTTCTAGTCGTCCTTCTATTATATTTATAGATGAGTTGGATGCACTCTGTCCAAAGAGAGAAGGGGCTCAGAACGAAGTGGAAAAGAGAGTTGTAGCTTCCTTGCTGACATTAATGGATGGCATTGGCTCAGTAAGTA .:...:x..::xx..x...x...:...x.::..x..x.....x.....x......:..........:.....:..:.....:.....:.....:...........:........:.....x:.x:.:...:.:..............:.......... 158M 124/158 78.5% 158/94230402 0.0% 0/158 0.0% 83800750 NA +14075 chr4 + 190214555 122947216 122947215 122947522 307 TCATTTTATTTTGTTAGGAAGTAAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGACCTGGGCGATTTGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGGTGAG----TGTGGTTTGCT-------------ATGGTGAGTCTCTATTGA chr4 - 94230402 39138763 39138762 39139086 55091317 55091316 55091640 324 TTGTTTGATGTGTTCAGGAAGGCAGTGAAGGGCAGCTCGTGGTACTAGGGGCCACCAATCGTCCTCATGCGCTAGATGCAGCACTGCGCAGACCCGGCCGTTTTGATAAAGAAATAGAAATAGGAATTCCCAATGCCCAGGACCGCCTGGACATACTCCAAAAGCTTCTGAAGAAGGTTCCCCATTCTCTCACAGCAGCAGAGATGATGCAACTGGCTGACAGTGCACATGGTTATGTGGGGGCTGACTTAGCAGCCTTGTGCAAGGAAGCAGGTAAGGATTTGTGTCTTATTCAGTGTCTTCTTCACAGTTAGCCTCtattaa .::...x..x.xx.:......xx........:..:x.xx....x..x........x.....:........x:.:.....x..x..x..x.....:..x..x...........:..x..:..x...:..........:........x..:..:..x.....:..:..x..xx::.:...x.......:x.....x.x:..x...x..x....:.....x:.:.....x.....x..:..x..:..x.....::x..:......:..x.........:..----....x:..::.-------------.::..x..:.......:. 278M4I11M13I18M 226/307 73.6% 324/94230402 0.0% 17/307 5.5% 83808453 NA +27893 chr4 + 190214555 122960074 122960073 122960729 656 TGTTTTGTAGTTCACCTTTTTAAAGCAAAGA--------GCAGCTGCATTTTGAAATGTTTTATCTCAAATGGGCAAGTTGTTTACAAGCTAGACTCTAACACATCCTGACATTTAGTGTCTGTGTTTGTATTCCTGCTGGGATTAGGCTGCCTTT---CTAATTAATTAGTTGCATAGCCTTTTATTAATTCCCTCAAAATTTATAATG-TTTTAAATTAACAACATAGATAAGCATACTGCATTTTTTGGGAAAACAT--GAAATATTAATTATGTAGCAGTGACATAAGTTTCGTAAACTCTGTTGAATGTTAGAAGATGCTTA-CAACAATGTTTTCCAAATATAGGGATTTATT-ATAAACTTATCCTTCTAAGGCTGCCTGTGCCATTTCAGGAGAGTGAATATAAATAGATCTTGATTTCTTCAAGAAGTGGACTTAGTCATTTTGTTTATGGTGAAAGGAAGTATTTGCTTTGCGTCTCTAAGAA-TTGTCTTTAGCATCCTTGTTAATTACACATCATTTCAACATGTTCTTACCAAATTCTCAGGCCTTGATAAGGTAGCATAAC-AGAACAGGAAGAATTAAAACTCATATTTAAATAAT----TATTTTGTTATTACAGCACTTAAATCTGTCTAGTAGCAATACCGAATCTAATAATTGTAACTT chr4 - 94230402 39143202 39143201 39143866 55086537 55086536 55087201 665 TGTTTAGTAGAGTACCTTCT---AGCACAACTACCTTCTACAACTGTCTTTGGAATTGTTCTGTCTCAAGTGGAGGCAGTGTTTAGGAAATAGACT--GCCATATCCTTGCATGTAATGTCCGTGTTTGTACGCCC-CTGAGATCTTGTTGCTTCTGCTTTAATTAAGTGGCCACACAGCCTTTTATTAATTCCCTAAAAAATAATAATGGTTTTAATTTAACAACAAAGATAAGCACTCCACTTTTTTTGGAAAAACATATGAAATGTTAATTATGTAGCGGGGACATGAATGGTATAAACTGTACTGAACGTTAGAAGATGCTTAGCAACAAAGGTTTCCAAATATAGCAATTTTTTTATAAACTTATCCTTCTATGGCTGCTTGTAGCATTTCGAGAGAGTGAATATAAATATAACTTGATTTCTTCAAGAAGTGGGTTCAGTCACGTTGTTTACAGAGAGAGGAAGTATTTGCTTTGTAACTCTTAGAATTTATCTCGAACATCCTTGTTCATTGCACATAATTTCAGTGTGCTGATATAAAACACTTGGACTCTGATAAGATAGCATCATGAGGAGAGGAAGAACAAATGTCTTTGTTTAAATTGTGGTCTCTCTTGCAATAACATCAGTTTGGT---TCCAGTAAGGATGCTG----CAACCAGTGTAACTT .....x....xx:.....:.---....x.:x--------:..:...:x...x...x....:.:......:...:x:x:x......x:.:x......--:x..:.....x:...x..:....:.........:x..:-...:...:xx.:...:.:.---:.......x.:.:::..:...................x....x.x......-......x.........x.........:x.::.x........:.......--.....:.............:.x.....:.:.xx::......x.::....:...............-......x.x.............x:....x..-.................x......:...:x......::.................x.x.....................::.:.....:x.......::.x..:.................::x....x....-..:...:x.:..........x...:.....x......:::..:.xx..:x...:x..::.:.::.......:......x.:-..:.x........:x..x::::x.:.......x:.----.x.:...:x..x...x..x..x::.---..:....:x:..:.:.----:..:x.x........ 20M3D8M8I57M2D38M1D19M3I51M1I49M2I65M1I31M1I133M1I81M1I35M4I25M3D16M4D15M 483/643 75.1% 665/94230402 0.0% 35/643 5.4% 83816872 NA +9997 chr4 + 190214555 122979183 122979182 122979432 250 TATTTATGAAGGAAAAGACAAA-------TCTTGTGTTACTTTCCTCTCTTTATAGGTCTCTGTGCCTTGCGGAGAATCCTGAAAAAACAGCCTAACCTCCCTGATGTCAAGGTGGCTGGACTGGTGAAGATTACTCTGAAGGATTTCTTGCAGGCAATGAATGATATCAGACCCAGTGCCATGAGGGAAATAGCAATTGATGTCCCAAATGTAAGTCA-TTTATGTCCCACACTAGCTACACTGTTTGAATTAAACT chr4 - 94230402 39151377 39151376 39151634 55078769 55078768 55079026 258 TGTTTGTGAGAAACAGGATGAAGTCTACATGTTTTTCTGCTTTTTGTTTTTAATAGGTCTGTACGCGCTGCGGAGAGCTCTGGGGAAGAGAGCTCACCCCTCAGACACCGAGGTGGCTGGGTCAGTGATGATTGCTTTCAATGACTTCCTGCAGGGGATGAAGGATGTCAGGCCCAGCGCCATGAGGGAGGTGGCAGTCGATGTGCCAAAAGTAAGTTGTTTTTTGCAGTACACTAGCGACATTGTTAGAGCCACATT .:...:...:::.x.:..::..-------.x..x.x:.:....::x:.:..x........x.::..x:........:::...:::..:x::x..x...:.:.x..:::.:..........::::....x....:..:.x..x..:...:......x:.....x...:....:.....:...........::.:...:.:.....x.....x......::-...x..:xx:........x...:....x..:::.x.:. 22M7I190M1I38M 167/250 66.8% 258/94230402 0.0% 8/250 3.2% 83827806 NA +3003 chr4 + 190214555 122990464 122990463 122990521 58 TGGTCATTAACTAATGTTTTTAAATTGTTAGCTAAAAATAAAACAAAAAACAAAACAA chr4 - 94230402 29269910 29269909 29269967 64960436 64960435 64960493 58 TGGTGGTTTGCTGATCTTTTTTGATTGTCAACTAACAATGAAAAAAAAAACAAAAAAA ....x:..x:..:..x.....x:.....:.:....x...:...x...........x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 93720554 NA +3008 chr4 + 190214555 123007530 123007529 123007592 63 ATATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 71630160 71630159 71630222 22600181 22600180 22600243 63 ATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG .....:....x.x......:......x..::....x..........x.x:x..x:.x.x.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 51377370 NA +3174 chr4 + 190214555 123007530 123007529 123007593 64 ATATATATATATGTGTATGTATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x...:..:.:..:....:.:.x.....:...x:...............x:.x.xx.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 103303256 86911299 +3021 chr4 + 190214555 123007575 123007574 123007634 60 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACA chr4 - 94230402 32959568 32959567 32959627 61270776 61270775 61270835 60 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCA .....::x.:.:::..x....x.....::...:.......:.......:.x.....:x.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 90048007 NA +3100 chr4 + 190214555 123007575 123007574 123007647 73 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA-ACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:......::.:x:::...:.x.:::.:.:...::x..:..xx...:.:.............-..... 68M1I5M 50/73 68.5% 74/94230402 0.0% 1/73 1.4% 114611786 75602769 +3036 chr4 + 190214555 123007589 123007588 123007628 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 33186307 NA +3192 chr4 + 190214555 123007591 123007590 123007642 52 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 - 94230402 70982629 70982628 70982680 23247723 23247722 23247774 52 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...........:........:....:.x:...x..:.:.:::..:....... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 52024962 NA +3039 chr4 + 190214555 123017415 123017414 123017496 82 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCACTATATACAGCTAATGGCTTTTACTTATTTTCATTTAGAT chr4 - 94230402 70681065 70681064 70681146 23549257 23549256 23549338 82 TTTTTAGTTTTCTACTTTTTTGTTGTTGTTTTCTGCTTTTTATTTTCTAGCACCAGCAATTCTTATTTAGTTTTATTTGTAT .....xx....:.x:......x..x..x....:.......:.:.x.x..xx:.:.:::::.:...:...x...:....:x.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 52336350 NA +14408 chr4 + 190214555 123028165 123028164 123028429 265 GGAAAATGTTCTATTTTTCAGGTATCCTGGTCAGATATAGGAGGACTGGAAAGTATCAAACTGAAGTTGGAACAGGCTGTGGAATGGCCCTTAAAACATCCAGAGTCTTTCATTCGAATGGGTATTCAGCCACCTAAAGGAGTTCTTCTCTATGGGCCACCTGGGTGCTCTAAAACAATGATAGCAAAGGCTTTGGCCAATGAGAGTGGACTGAATTTTCTAGCTATAAAGGTAGGGTGTTAAATTTTTTAATCGCTACTCTCTC chr4 - 94230402 39158371 39158370 39158635 55071768 55071767 55072032 265 GAAAGATGGTCTGCTTTGCAGGTATCTTGGTCAGACATAGGAGGACTAGAAGATGTCAAGCTGAAATTGAAGCAGGCGGTTGAATGGCCTCTCAAGCATCCCGACTCCTTCATCCGAATGGGGATTCAGCCTCCAAAAGGTGTGCTGCTTTACGGACCTCCTGGATGCTCAAAAACAATGATAGCAAAAGCTCTGGCTCATGAAAGTGGCCTCAACTTCTTGGCAGTGAAGGTAGGCCATTCATTCTTAGAGTTTCTTAACTCTC .:..:...x...::...x........:........:...........:...::.:....:.....:...:.:.....x..x........::.x..:.....x..x..:.....:........x........x..x.....x..x..x..:..:..:..x.....:.....x.................:...:....:x....:.....x..x..:..::.:..x:.:........x::..x.x.:..xx.:.:x..xxx..... 265M 199/265 75.1% 265/94230402 0.0% 0/265 0.0% 83869794 NA +3777 chr4 + 190214555 123041459 123041458 123041556 98 CTCAAATATTGATTTTTAGACTATGTATAATCTATTACTCTGAAACAGTTTTTTGG-GGTTTTTTTGTTTGTTTGTTTTTGTTGTTTTTTTGAGACGGA chr4 - 94230402 71837858 71837857 71837956 22392447 22392446 22392545 99 CTTGATTTCTTATTCACAGACTCCTAATTGTCCATAATCCAGAACCAATTTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTTAAATAGA ..::.x.x:.x...:x:.....x:xx..x:..:..x.::.x...x..:........-.........x...........x.x..........x.:.::.. 56M1I42M 69/98 70.4% 99/94230402 0.0% 1/98 1.0% 51203601 NA +5249 chr4 + 190214555 123056339 123056338 123056528 190 ATGATTGCATTTATAAAGACACTGAACAGTTGTTTTCTTTTCAT--------GCAGGGGCCTGAATTAATGAATAAATATGTTGGTGAATCTGAAAGAGCAGTTAGAGAGGTAAGAAATTGT-GCCTTTAGTGGCACTCAGCACAGGAGAATCACACTTCTGTCCTGTGCAGCTTCCCTTTTGTTTTAGGTAACAGACT chr4 - 94230402 39169089 39169088 39169265 55061138 55061137 55061314 177 ATGTTAACatttttaaa----------actttttttttttttattttattttGTAGGGACCTGAACTGATGAATAAATATGTTGGTGAGTCGGAACGAGCGGTGAGAGAGGTGAGAAAGTACAGGCTGTCTTGGCATTCAA------------ATTCTTCTGTGCTTATAAGGTTACCTTTAAATTTCCCCAAAAAACT ...x.x:.....x....----------.x..x....:....:..--------.:....:......:.:....................:..x...x....:..x........:.....x.::-.x..x.xx.....:...:------------.:x.......x..xxxx..x..x.....x:x...xxx:..x.:... 17M10D17M8I70M1I18M12D46M 123/168 73.2% 177/94230402 0.0% 31/168 18.5% 83887250 NA +5587 chr4 + 190214555 123057205 123057204 123057338 134 CCAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCTTCCATTATTTTCTTTGATGAACTGGATGCCTTAGCAGTTGAAAGGGGCAGGTAAGAA-----GTATTTAATAGCAC---TGCTATTACATAATAATATGATGTTACAT chr4 - 94230402 39169560 39169559 39169701 55060702 55060701 55060843 142 CTAGATCTTTAGGAAAGCCAGAATGGTGTCTCCTTCGATTCTTTTCTTTGATGAAATAGATGCCTTGGCAGTTGAAAGGGGAAAGTAAGTAATTCTGTTATGAAAATCACAGATGTTATTTTCTGATAAATTACTTTTACAT .:...:...:x.:.....x...:::...x.x.....x...x..............x.:........:..............x.:.....x.-----..xx.x..x.x...---..:....x:x.:....xx.:x.x...... 91M5I14M3I29M 100/134 74.6% 142/94230402 0.0% 8/134 6.0% 83887645 NA +15764 chr4 + 190214555 123061847 123061846 123062201 355 TTGCTGAAG----TAGTGTGACCTTCCACAGTTATGTGACATCAGAGACATCTGGTTTTGGACCCTAAAAAGGAACAGGTGGGAGGGATATCC-----------TGTTAAATATGAACCAGATGGGAGGTAGAATATGTAGCAAAGTTCTCTTAAAATGTCTCTGAAATAAAGTGATGTGAGAAACCAGACAAGGCACTTTGTAGTAATATCTTGCTTTCATAGG--AGTTTAGCTCAGTAGGAATTACCAGATACATAAGAGATGCTAATGATTTGCAGCTTCTAGATGT-TATTTCCTCTGGTAGTCTTCATCAAATTGAACTTTTC-AGAGAACACATGTGTTTAGTGTATACCTCCCTCTCTCAATGGCT chr4 - 94230402 39171037 39171036 39171407 55058996 55058995 55059366 371 TTGCTGAAGAATGTGGTATGACCTGCTGCAGTCATGTTGCGCTGGAGACATCTGGTTTTGGAGCTTTAAAAAGAACAGG---GTGGGACACACAAATATTTCATTGTCAAATCTGAACCAGATGGGAGGTAAAATATGTAGCAGAGTTCTCATAAAATTCATCTGAAATTAAATGGTGTAGGAAACCAGACAAGGCACTTATTAGAAATGACCTTTTTTTACAGGCTGACTTTGCACAGTAGGAATTTGCAAATGCATTAGAGATGCTAATGATTTGTGGCCTCTGGAGATCCATTTCCTGTAGTGTTACTAGCCATAGTGAAGTTTTCAAGGAAACACCTGTTTATATTGTCTCCCTATCCCCTTTGTTGGTT .........----.:..:......x.::....:....x:.::::..................x.:.x....:.......---.x....:.:x.-----------...:....x..................:...........:.......x......x:x........x..:..:...::...................xx...x...:x.:.x:...:.:...--:::..x..x...........xx..:..:...x..................::..:...:..x:.-:.......x.:..:x.x:.x::..x.x....x.....-..::.....x...x.x..x...x.x...x:.:.::.::x...:. 9M4I66M3D11M11I121M2I64M1I37M1I44M 263/352 74.7% 371/94230402 0.0% 22/352 6.2% 83890810 NA +7100 chr4 + 190214555 123071503 123071502 123071790 288 ATCACTTGTTTCTCTTATTCTGTGTTTGAATCAAAA--CTATACAAATGTAATGAATATTGTCTGTGTTAGTGTGGAATTTTTACTGGGAAATCATGGCAAGATGGAAAAATACATGCTTTTATGTCACTCTCTATGTTAACAGTTTATACAA-ATCTGCAGTTACATAGAGCACA-TGCAGCTTATACATCTGTATAATAGCTGACAAAGGTAACTTGTGTGTCTTTCTGCA--TTTATAGGATATCTTATTAATCTAAAA------------TAGGTTCC-TGCTGAATGTTGATCATAATCTAA chr4 - 94230402 39178793 39178792 39179088 55051315 55051314 55051610 296 ATAATTTGTTTCTCTGACTGC-TGTTTGCGTCAAAAGTCCAGGCAGCCTTAATGAAAGTTGCCTGTGTTAATTTGAAACCCTTGCTGGGAAATCATGGGAAAATGGAAAAACGCATACTTGCGTGTCACCCTTCAGATTAACAGCTTAGGCAGCGCTTGCATTCTCGAGGCGTGCAGTGCAATT----------CAGAGCGGCTTGTAAAGAGATCGCGCATGCCTGCTGGGAGTTTCATAGGGCATCCTCTGAAGCCAAAAGCTAATTTGCTCTAGACTCTGTGCTAAATATGGTGCATCATATGA ..x.:..........x.:.x:-......x:......--.:.x:..:x:x.......x:...:........:.x..:..:::..:..............x..:.........::...:...x::......:..::.x:.......:...x:..:-:::....x.:x.:x:.x.::..-....::.----------:.x.:::...x::....:x.x.x:.::..:..x::x.x.--..:.....::...:.x.x..x.:....------------...::..:-....:...:.x.xx...x..x.:. 21M1D14M2I115M1I22M1I7M10D39M2I27M12I8M1I24M 181/277 65.3% 296/94230402 0.0% 30/277 10.8% 83892710 NA +3235 chr4 + 190214555 123075387 123075386 123075445 59 CTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::........:.x...x.xx.x........:..:.........:.:....x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 104878248 85336307 +3398 chr4 + 190214555 123082478 123082477 123082542 65 TGTTGGTACTTTTTGTGTGTGTCTCTG----TCTCTCTCTCTCTTTTTTCTTTTTTTTTTTTTTTGGTC chr4 - 94230402 18929883 18929882 18929951 75300452 75300451 75300520 69 TGCTTGTACTGTCTGCAGATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTC ..:.x.....x.:..::x:..x:x...----.............:.:..:................... 27M4I38M 51/65 78.5% 69/94230402 0.0% 4/65 6.2% 104152595 86061960 +3017 chr4 + 190214555 123082486 123082485 123082533 48 CTTTTTG-TGTGTGTCTCTGTCTCTCTCTCTCTTTTTTCTTTTTTTTTT chr4 - 94230402 49339962 49339961 49340010 44890393 44890392 44890441 49 CTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT .......-...:.x....:x..................:......::.. 7M1I41M 41/48 85.4% 49/94230402 0.0% 1/48 2.1% 73742524 NA +3011 chr4 + 190214555 123084579 123084578 123084625 47 AGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089501 48089500 48089547 46140856 46140855 46140902 47 AGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...x.:......:::........:....x.x......:......... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 74995078 NA +3096 chr4 + 190214555 123084581 123084580 123084623 43 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089505 48089504 48089547 46140856 46140855 46140898 43 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:......:.:........:....x.x................ 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 74995076 NA +9883 chr4 + 190214555 123090567 123090566 123090727 161 TTTCAAAATCAGTTCTTTAGGTGCTGGGAATGTAGCCGATCGTGTTTTGGCTCAGCTCTTAACAGAAATGGATGGGATTGAACAGCTAAAGGATGTGACCATTTTGGCAGCTACTAACCGTCCAGATAGGATAGACAAGGTAAGAGAGAAGGCATTGTGGA chr4 - 94230402 39181517 39181516 39181677 55048726 55048725 55048886 161 TTTGTAATTCAGCTCTTCGGGTGCTGGAAATGTAGCAGACCGTGTCTTGGCTCAGCTGTTGACAGAAATGGATGGGATAGAGCAGCTGAAGGACGTGACAATTCTGGCAGCTACAAACAGGCCGGACATGATAGACAAGGTACGAATAGATGCAGTGTTGA ...xx..x....:....::........:........x..:.....:...........x..:.................x..:.....:.....:.....x...:..........x...x.x..:..:.x.............x..:x::.x...x...x.. 161M 129/161 80.1% 161/94230402 0.0% 0/161 0.0% 83909050 NA +3057 chr4 + 190214555 123095030 123095029 123095098 69 CAAAAAAAAAAAAATATATATATATATATATATATATGTGTGTGTGTGTGTGTATATATATATATATAT chr4 - 94230402 52579739 52579738 52579807 41650596 41650595 41650664 69 CAAAAGAAGAAAACTGCATTGAAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGT .....:..:....x.::..xx.x...xx.xxxx.x..::............:...............:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 70515291 NA +3205 chr4 + 190214555 123095045 123095044 123095093 49 ATATATATATATATATATATATGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x:...................x:....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 118688622 71525933 +3205 chr4 + 190214555 123095047 123095046 123095095 49 ATATATATATATATATATATGTGTGTGTGTGTGTGTATATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::........xx....x................:...x:....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 118688624 71525931 +9535 chr4 + 190214555 123096006 123096005 123096340 335 AGTTTCTTGGGGATTCTGGTG----TTTTAGCAAAGACAGTGAGACACATA--GCTCAAGAACTGCGTTATTTTACTCCTTGCTATGTCACATTTACATGTCAGACTCATTTGCTGTGATGTAGCACACTAGGCTG---GTGAAATAATTGCTTGTGATGTCC---------CTAAGTCCCCGAGGCTTTTTTCTACCTCCTGCTTAGATAGTGAAGAGAAGTTGAAGTTGAGTCCTCTAGTGTTCATTTTGCGTAAGAGTGATAGGATGCGGTAGGACAGATGAAGATTAATGAGATTGTGTGATATCAAGTAGGCTCATTGTCTTTAGATTGATTGCTGATGGTCTGGATT chr4 - 94230402 39185317 39185316 39185658 55044745 55044744 55045086 342 AGACCCCCAGGGACCTTGGTGAATGTTTCAGCACAGGAAGCAAGATGCCTGTTACTGTGGTATCTGGTAGTTTTACCTCCTGCTGGGTTAAATTTGATTGTCAAACACATTGGCAATGATGTAAAACACAAGGTGATAAGTGAAGTGATGGCCTGTGATATACGATGACATGCTG-GTGCTCCTGACAGTTTCACTTCTCCTTATCAAGGGGTGCAGAAAAGATGTA------TCCTCAAATATGCTATTTGCATAAGAATGACAGGATGTGATAGGACAAATGAGGATTAATGAGAGCCTGTGCTGTCAGTGTTACCCATTGTCTCTAGATTGA----TGATGGTCTGGATT ..x::.:::....:::.....----...:....x..:x..::...::.x.:--:..xx:.x.::xx..x:......::.:....:x..:.x....:xx.....:..x....x..x:.......:x....x...:x:---.....:.:..x..:......:.x.---------..:-..x.:.xx.:.xx...:x:x:.....xx.:.::x:...x...:...x..x.------.....x.:.:.x.xx.....:.....:...:......:.:.......:....:...........x:x....x.:...:xxxx:.:........:........----.............. 21M4I26M2I83M3I24M9I3M1D51M6D102M4D14M 217/324 67.0% 342/94230402 0.0% 29/324 9.0% 83910689 NA +16866 chr4 + 190214555 123127888 123127887 123128246 359 GTGTTTTTAGATGTGC---TTATTTTCACCTCTTCCTCCTGGAGGTTAAGCTAGTACTCATTAAGGAAAAAATACAGTTTATA--CTAAACAGTGTTTAACATATACTGATGGTATTACTGTATTTCCTGTTTTGTGTTCACAATGAGAAGATTCTGAAAAACTGTCTTTGTGTAAATACTTTACTGACATACCAGACAAGTATAATCTTGTCTGCTGGTAGGCAGGAAAGAGTGATGTCCTGGAATGTTGTT-GAGAAGGAAATCTCTTTGTGTTCCACAAATGATACCCTTAAA-CCCTTTAAGAATATA-ATTTTAAAATGACAGCTCTGAATTTGCTTTTCCTTCCGTTTATTAACTTTTCAT chr4 - 94230402 39199657 39199656 39200014 55030389 55030388 55030746 358 GTATTTTCAAATTCACACTTCACATCTCCCTTTCCCCTAAAGGGGTTAA--CACTACTCATTAATTGAAGAGCACAGTTTATATACTAAGCATTATTTAACGTACACTGGTGGTATTATTGTACTTCCTGTTTTGTATTCACAATAATAGGTTTCTGAAGAGTTGCCTTTGTATAAATACCTCGCTGACATTTTAGGCAAGTATGTTCTTGTCTTGGAGTAAGCACGAAGGAGTAATGTGTTGGAACACTGCTAAAGAAGGAAATCTCTTTGTGTTTCATAGATGATACCCCTAAAGCCTTTTAAGAATATATGTTTTTAAATGACAGCTGTGCAGTTGTTTT-------GTTTCTTTACTTTTTAT ..:....:.:..x::.---.:.:x.::x...:.:..::xx:.:......--:.x..........xx:..:.::..........--....:..x.:......:..:....:........:....:............:........:.x.:.x.......:.::..:......:.......:.::.......x::..:.......:x........xxx:...:...x...:....:....x:.....:::..:.-:.....................:..:.:.........:....-..:............-:....x...........x..x.x...:...-------....x..x......:.. 16M3I30M2D32M2I168M1I42M1I15M1I30M7D17M 266/350 76.0% 358/94230402 0.0% 17/350 4.9% 83928231 NA +9900 chr4 + 190214555 123139020 123139019 123139482 463 GTTTTAAGAGGTATTTAAATTTTGGAATTTTTAATAGCTATCTGTTTCTTCTGTAACTTTG--ATTATATTATAGCTTTTCTTGAATGAGGAGATAAAACAGATGTAAATATTAAGACAAAAGCTTGATGCCTATGAAACAAATTATTTCCAAGTACATAGAGTGAAAATACTTTAAAAGCCTTTGAATTTGGCAACTTTCTCTTTGCATTCCCTTTCC-----------TGATTCTGTAGCAATCACTGTCTTGTTCTTAAT----GAACTGGTACTCAAAGGTCATTCAGAAACATTCATTAAAACCAGTAGGGAAATAATTCT--ACAGACTTCCTTTAACCAACCTGTAGTTTTGTTTTCTTTCTTAATAGCCTCAGGTCTCAGACACAACCATCTTTTATTTATTTTTTCTTTCTTTCTGGAATCAAATAACTTTTAAAGATTTGAGAAAATCAGCACCAATATTTGAAGATTAAAA chr4 - 94230402 39206003 39206002 39206441 55023962 55023961 55024400 439 GTTTTAGTAGGTACCCAC------GAATTTTTATT-TCGGTCTGGTTCCCCCTTATCTCAGCTATTTCCTTTTAGCCTGTCAAGGAAGAGGAAGAAAAGAGGCTGCAAATGTGTAGGGACAGCCTTG-TGCCTGTGGAGTAGATTACCTCCGGG-ATATACAGCTGAAATGTTTGAAACGCCTTTGAGTTTGGCAGCTTTCCGTTTGCTTTCCCTTTTCCTTCCTTTTTGCAGTCCTCCAGTAATAGCTCCCTTGTTCCAAAGAACAAAACCAGCACTTAGTGGTCATTCAGAAAGATTCATTAAAAACAGGAATGGAGTAATTGTAAACAGGCACCCCT-------CCTGTCATCCCCCCTTCC----------ACTCTAGCCCAGGGCACAGCAGTCTTATGT--------------TGTCTGGCTCCAGACAATTTTTGGGGA---GAAAAAAGGAACAATAGCCTTTGGAGGTTAAAA ......:x.....:::.x------.........x.-x.x:....x...::.:x..x..:x.--...x:x..x....:.x..xx.:.x.....::x...:x:.x..:....:.xx..:x.x.:x....-.....:..:.::.:....::...::.-.:...x..:x:....::..x...x........:.......:.....:x.....x........:.-----------:::.:..x:..:...x:..x:.......:x..x----:...::.:...:.:x.............x...........x...x.:x.:.:.....x.--....:.x:..:.-------.....x:.:::x::...:----------x...x:.:.:x:.:....:.x:....x.:.--------------.x.....xx:..:.:..:....:::..---..:....xx.:..x:.::x....:..:...... 18M6D11M1D25M2I64M1D26M1D64M11I33M4I59M2I12M7D18M10D30M14D27M3D33M 276/420 65.7% 439/94230402 0.0% 62/420 14.8% 83933017 NA +6055 chr4 + 190214555 123140351 123140350 123140497 147 CTTCTTTTACTTACATTCCAACATCACAATAGAAAATAATGCAAATAGCCTTCTAAATGATTGATATATGATGATATGTTAGGCTTATTTATTGAGTCAATGCTTCACACCTGTTCTGTGTCACAACACCTCCCTTAGAGGATAAGG chr4 - 94230402 39207906 39207905 39208052 55022351 55022350 55022497 147 CTTCTTTCACCTCCAGCCTAACCTCGTGGCAGAAGACCATATGAATGGTCCCATAAGTGATGGGTGTGTAATGGGAAGTCGTGCGTGGCTGGTGAGTCAAAGCTCCACACCTGTTCTGTGTCACAACAGCTTCCCTCGCGCATGGGG .......:..:.x..x:.:...x..:::::....:.:x..:::...:.:.::x...:....x.:.:.:.:...:x.x..::x..x.:x:.:x........x...:.......................x..:..:.x.x.x..::.. 147M 96/147 65.3% 147/94230402 0.0% 0/147 0.0% 83932445 NA +16386 chr4 + 190214555 123172065 123172064 123172453 389 TGTTTGTAAAGCAGCATACTTGATGC---TGCAAC-CAGTGACTTTTTGCCATGCATTCTTAATACTTCTTGGAATATTTGGTTTAGGAAGTGGGGTAATTAGTACATAAACACTGTGTAGCAGAACTACCCTAATTAGTGCCTTTTGGCCTGGCTTCAATGATAAACAAAGTAAGATGTGTGTCAGCATTCATCCTAACACTTTATAAAAATTG--TTATAGCCCTATGGGGCAGCATACACAAGATAAGTTAAATAAT-GTAGTAGTTGAGACCATGAGAAGGAGTTTTGTCTGTCTA-TTTAATAGTCTTTGCATGATAAATTAGCTTCCTAGCTTTGAAGGCTT-CATTAGTCTTAATTATCCAGAAAGCATAAACTTAGCCAT-----CAAAGTGTAT chr4 - 94230402 39224041 39224040 39224437 55005966 55005965 55006362 397 TGTCTGTGAAATCACATGCTTGATGAGAATGCAATTCAGTGGCAGCTTGCCACATAATCTTAGCTTTTCTTGGAACATTTAGTTTAGGAAGTGGACTAATTAGCACGTAAACGTTGTTTAGCAGAACT---CCAATTAGCAGTGTTTGGCCTGGCTTCAGTGATAAACAAAGTTAGATGCATGTCAGTGTTTGTCCTAACAGTTTATAAAGTCTACTTTGTGGTCCGAAGGGACAGCACACACCAGATATGTTAAATAGTCATTGCAGTCAAGGCCATGAGAAAAAGCTCACTGTGTCAAGCTTAATAGGCTGTGCATGATACATTAGTGGGCCGGTTTGGAAGCCTTCCATTGATCGTAATTACTCTGAAA-TACCAACT--ACCATCTTTCCAAAGTGTGT ...:...:..::x:...:.......x---.....:-.....:.xx:......:::.x.....::x:.........:....:.............:x.......:..:.....::...x..........---.:......::x:x...............:.............x.....::......::..::........x........:x:.:--..:.:.:..x.x...:.....:....x.....x........:.-:.x.:...::..:.........::..:.:xx.x....x.-:.......x..x.........x.....:xxx.::.:..x....x...-....::..x......::.x....-:.:x....--:....-----........:. 26M3I6M1I92M3D84M2I43M1I39M1I47M1I23M1D8M2D5M5I10M 286/383 74.7% 397/94230402 0.0% 20/383 5.2% 83948024 NA +8816 chr4 + 190214555 123186890 123186889 123187205 316 TGTACCTGCAAAGCTCTAATGAATGCCAC-----TACATGGTGGAGCTTGAGAACTCA-----CTGAGCTACCCAAAAGACTAGTTTGTCATTGCAGTGGCTCCTAGACATTGCTTTATGAGGAAAGAAAAGAGGAAAGAGGATGAGCCTAGATACAAAG---------GGAAAGGCT--------------TGGGAAAAAGAAACTACATCCATGATTTTTATAGTGCCTCTTTTGTTA-CTATTGTTTTGTA-AATAAGATAGGTAGCAAATCCAGTCATTCAAAATTATAAATAACCACTAAAGGGAGAAGTCAATGCTCACTTTAGCT-TGGTTTCTGCTGTTGTTCT chr4 - 94230402 39236208 39236207 39236548 54993855 54993854 54994195 341 TGTGCCTACAAAGCTCTGTTGAATGGCACATCCTGACATGTGAAAG---GAGAAATGGTGAGGCTGAGCTACCTGAAAGAATGGCTTGGCATTCCTGTGGCTGAGAGGAACTGCTTT-TGAGGAAAGAAAGGAGGT--GGGGAGGAGCCGGGGTGGCAAGCAGTGTGCATGAGGGGCTGCAGCGAGGTGGGCTGGAGCTGAGAGACCACATCCGTGTTTTTCCAGGTGTCCCTTTTGTAATCTTTCATTTTTTAGAAGAAAAGAGGCAGCAAATCCACTCATTCAGAAAAATAAGTGACAACAAAAGAGAGAAAGCAG-----ACTTGCGCTGTGCTTTCTGGAACTGTTTT ...:...:.........:x......x...-----x.....xx::..---.....x.x:-----..........::.....x.:.:...x....x.x......xxx..:x.:......-............:....x--.:...x.....x:.:.:xx...---------x..::....--------------...::xx:...:..:......:..x....:xx:...:.:.......x.-..x.::....x..-..x..:.x...:..........x.......:..xx....:.:..x..x....:.....:x..:-----....xx...-..x......xx::....:. 29M5I12M3D9M5I54M1D18M2D22M9I9M14I48M1I13M1I63M5D9M1I19M 221/305 72.5% 341/94230402 0.0% 47/305 15.4% 83950682 NA +8102 chr4 + 190214555 123193465 123193464 123193737 273 TAATAAACTTTTAGTTGCT-----GAATGTTAACAATAACAATCTTTACTTTTAAAGCACTATAG------------------ACAAAAGTGTAATTTTTATTTAGCA-CCAATAAATAAATGATTTAACATTTTAAAGTATTTAATAAGACTGAAACCCACAGCAAAGCTGTTCTCTGGTGTACAATTACTG-GAGAAGTTCACTAGGTCAGAGTAAAAGCGAAGAAGATGTATTTTAACATCTAAT-------ATGCAATGTATTTTTTGTTTCTTAATCAGAA------TGTGAAAAAGAACATAAAA chr4 - 94230402 39240594 39240593 39240903 54989500 54989499 54989809 310 TAAGAAACTATTTGTTACTTTTTTGTATGC-AGCCGTAACAAGTTTTAACATTAAAGTGCTACGGTATCTGATTGCCTACAGGAAAGGGATATAATATTCACTTAGCAGCCAATGAATGAATGATTAAAATCTTAAAAGCATTTAATAAGATTGAAACACAGAGCAGGGCTGTTCTCTGGTATAAAGTTACAGAAAGAGGTTCACTGGGTCAGAGAAAGAGTGCTGGGGATTGACttttatttttattttttttaaaGCAGTGTTACTTCTACTGTCAAGTCAAGACAGCTCTGAGGAATAAACCATAGAA ...x.....x..x...:..-----.x...:-.:.x:......x:....x:x......::...::.------------------.x.::::.:....x..:.:......-.....:...:.......x..xx:..x....:...........:......x..x....::.............:..x.:....x.-:...:.......:........x..:..:.xx.::...xx.:...x.:x.:..x.-------.x...:...xx:..:.::.x::x.:...::.------..x.:..x.:.x....:.. 19M5I6M1D34M18I25M1I84M1I54M7I31M6I19M 189/272 69.5% 310/94230402 0.0% 39/272 14.3% 83952871 NA +7216 chr4 + 190214555 123195600 123195599 123195864 265 CTTATTAAGATAAGAATCTTAAT----GCACTATGAAAAGAAAAACAAAACAAAGCCCAGATAACAGGTTTCTTTTG-GTAGTGATCTACAAGGTATTAGGGATATGATTTCCCTCTTGTTCTGCTGTCTCTCTGTCCCTCAGTGATTACAGGTAGAGCATCACTTCAATAACTCTTCCAGTCAGTATTGGTGGTGACAGCCAGTCTGACCTGAAAAGAAACCAATACCCC----------TTCCCAACCTGGAAATGCTGGTAATTTATTTCACCATCC chr4 - 94230402 39241587 39241586 39241857 54988546 54988545 54988816 271 CTCACTGAGATAAGAATCTTAATCCCGTCGATAGAACAACAACAACAACAAAAGGCTGGGCTAACAGGTTTCTCTAACGCAGAAGCCTGAGAGGTATTAGAAATAGATTTTTTCTGTCTCTGTGC-------CTGGCCCTTGCCCACTAAAGGCAG--CACCGTGGCTCTCCCTTTCCCTGTCAGCGTCAGTGGCGGCAGCCAGTCTGACCTGGAAAGGAGCTGAGGCTCCGGAGGTCTCTTTTGAAATCCGGAAATGTCAGTAATTCGTTCCCTCGCCC ..:.:.:................----x.:x..x:.x..x..x.....x.x..:..:x:.x............:.x:-.:..x:::..:x:.........::...x:x...::..x.:x:.x...-------...x....::x:x.:..x...:..--..:.::xx.xx.xx..:.:..x.....::.::....:.:................:....:.:.::.x:.:..----------..:xx..:.:.......:::......::..:.x:.::.. 23M4I50M1I47M7D24M2D73M10I39M 165/256 64.5% 271/94230402 0.0% 24/256 9.4% 83954013 NA +3661 chr4 + 190214555 123221231 123221230 123221312 82 CTGCAGCCTAGACCTCCTGGGCTCAAGCAATCCTCCCACCTAAGCCTCTTGAGTAGCTGGAACTACAGGCATGCATCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:.....:.:.x..:.....:.....::x.:.x.xx:x..x.....:.::................--.:....:...::. 67M2D13M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 105024105 85190450 +29461 chr4 + 190214555 123233332 123233331 123234122 791 TGAGATTATACAGCCACATCTGTCAGAGCTGTGCTAACCTATGTCATCCATCTGTTCTGGTTATA-------------TTTTCCTTCCCTTTCCTCTCTTTT----TCTTCCATTCTCCCCAGCCTTTAAAAGAAAAAAAGTT-----------GAGAGTAAA-AACAAATCACCTCTTTTTATATTGAAATTTAAGGTGGAAGAAAAGTGGTTATAAAAGCATCTATCATCATAGCACTGACTTGCCAAGTTAAGTATTTAGGTTGGAAATCATGCCTTTCCAACTGCTTAAAAACAGGAAGTATCTCTGCTAAGTGATAAATAGCTCCCTGTTGCT---GGAAAGGAAGGCCTCT------TTTATTTCTTTCTACATT------------TTTGAGCAATAATAAATGAGTTCTGCA---TTTTCATACATGG--------------GTGTATGTGTGTGTGTGTGTGTGTGTATAATGCAGAAATCCATTTGCAGTGTTTATGTATACATATATACCTCAGTATATGTAAATATATGTGAAAATACTTTCCAAG----------ACTTTAAGCATAGAATC---TCTTCTCATAAGCCAGCCCAGGCACATCTTA-CTCAACAATTCAAGCAAAAC-CTTTGGATCTGTCAGAAACAGCTTATAGGTCTGCA-------TTAGGTGATTAATTGCCAGGAGAATCTGGTTCTATATTTTGTTACATATAATTATTTTCTTTTCTAAAGGTGTTCTTTTATTAAGCTCCCA----CCATAAAAGAGGGGAAAATAAGCACACGTCTTACATGCCTGATGTTTAGCACTTCTTACAAAAGAAAGAGGAAAACT--------TTAACATAATCCACTGATAAAAGCATATT chr4 - 94230402 39266699 39266698 39267558 54962845 54962844 54963704 860 TAAGGTTATATGGTAACATCTGTCAGAGCTATGCTAACCTCTGTCATCCAGCTGTTATAATTGTGGTATtttccttccttttacttccctttcctctcctttctgctttccctttctCCTC---CCTCAGaaaaaaaaaaataaaaaagagagagagagaaaagaaaaaaCCACCTCCTTTTATGCTGAAACTTCAGGTGGAATGAA-GTGGTTATAAAAGCATCTGTCAACACAGGAATAGTTTGCCAAGCCAAGTATTTGGGTTGGAAGTCATGCCTTCCCAACTGCTTCAAAACAGGAAGTATCTCTGTTAAGTGATGGATAGCTCATCTTTGCTAAGAGGAAGAAAAGACTTTATtttctttttttctttcttcctttctttTTCTGCCTTTGGGC--TAAT-AATGAGTTCTGCAGTTGTTCCATGTATGTAAAGAAAGAATTCCGTATAGATGTGTGTATGGGCGCACGTG------------------GCTGTGTGTGTGTATATAGGTGTGCATC--TGTATGAATATACAAACTAAAAAAGCCCCAAAACCAACAACCCACTTT--GTACATGATCGGTCCCTGTCAGGAGCCAGCCCAGGCACATCTTATCCCAGTGATTCCTGTAAAGCTCTCAAAATCTGTCAGAAACAGCCTGCAGGATTGCAACGGCTCCTGGATGATTAATTGCCAAAAGAGTCTGGTTCCAGGTTCCATTACATGTAATTGTTATCTTTTCTAAAGGGGTTCTTTTATTAAACTCCCACCCCCCAAAAAAGAGGGAGGAGAAAAAAAAGAGCTGACATTCCTGAGGTTTTGCACCTCTTAAATGGGAGCATGGAGGACTCCCTTATGTAAACATA---CGCTGAAGAGGGCGTGTT .:..:.....::.:x...............:.........x.........x.....x.::..:.:-------------....x...............:...----.:.:..x......:.---.:.:.:..:.......:.x-----------.....x...-..x...:......:......::.....:..x........x:..-..................:...x..:..x.x.:::........::........:........:.........:..........x...................:........::.......x::x.....---:.:...:..:.x..:.------...x.........x.x..------------....:..--....-.............---x..:...::...x--------------..:..x:.......:..x.:.:::..:------------------..x....x.:......:.x:.:.:.x..--.:....x.x...:.x::x....x.x:::.x..:----------.....--.:.:.x:...---:.:.x...x:.....................-.:..:::....xx.:...:.-..:x::................:.::...x:....-------:.:.:.............::...:........:.x:..:::......:.....:..x.............x.............:......----...x.........:::.:x..:x.x.x:x..x....x.....x....x....:.....x.x::..:x:x...::...--------.x......---.:....x:.::..:.:.. 65M13I24M4I15M3D19M11I9M1I43M1D130M3I16M6I18M12I7M2D4M1D13M3I13M14I27M18D28M2D33M10I5M2D10M3I31M1I20M1I35M7I91M4I77M8I8M3D18M 575/759 75.8% 860/94230402 0.0% 133/759 17.5% 83966633 NA +5464 chr4 + 190214555 123245617 123245616 123245764 148 TTCATTTTGTGCTCATCATCAATTGCTGCTATTTACTGTGGTGCATTTTTCCTGAACACCTGCTGTCAAATGCATCAAGTCTTTT--------CTTGCACAGTGCTACAGGTTTTTGCAGAACTGAGCAAGCCCAACATTAGACAG-------ATAGCCTAAA chr4 - 94230402 39269879 39269878 39270022 54960381 54960380 54960524 144 TTCACGCTGTGCTCA----------CTGCCACTTGATAGTGCACATTCTTCTTGAACACCTGCTGTCAAATGTATCATGTCTTTTCTTGTCAACTTGCACAATGCTCCAGGTCT---------TGAGCAAGACTGACATGACAGAGGGGTTGTATAGCCTGAA ....:x:........----------....:.:..:x.:xx.::....:...:....................:....x.......--------........:....x.....:.---------........x.::....x.x.x..-------.......:.. 15M10D60M8I21M9D23M7I10M 103/129 79.8% 144/94230402 0.0% 34/129 26.4% 83975738 NA +11101 chr4 + 190214555 123250803 123250802 123251100 298 TTTTCATTGAG--TTGTCATATAGTGATTTTAATAATAATAGAACATGC--TATTATTCAGAATACATTCTTCCACCCTAATATCCCAAAACAGTATTTTTAAAGAAATTCTAGGAAGGGTGTTTACTCATTCAGAGTTCTACAGGAAGGAAGGCTCTTTCCTAC--TATTTTTTAAGCATAACTTTCACTGACAAGACCAGGCCAGAAAAAGCCTAGCTGGCTGTTGGCCCA-GACAATGTTATAAT------AATCAT-TGAAGTATACTCAACCTGCACT-GCCTGAGGATAGCTACAGC-TAAAAAAAAT chr4 - 94230402 39274477 39274476 39274785 54955618 54955617 54955926 309 TTTCTACTGAACATTTTCATGTTCTG-TTTTAAAAATAACAAGACATCTCTTAACATCCAGGATACATTTTTCCATTCTGAAGCACCACAACAGTCTTTTTAAAGAAACTCTAGGAAGGGTGTTAACTTGATCAATGCTTTGCAGGAAGAAAAGCTCTTTCCTACAATTTTTTTTCAGCATGACTTTCACTGACATGATCAGGCTGGGAAAAGACTTATTGGCTGACAGCCCAGGACAGCCATGCAATATCTCCAGTCATCTGAA----ACTTGAACTACTCTGGCCAAGGGAGAACCATAACATAAAAACAAT ...::.:...:--..x....:.xx..-......x.....:.::....x:--..x:..:...:.......:.....::..:.x::x...x......x............:...............x...::x...:x.:.:.:.......:..:............--.x......x.....:.............x..:.....::.:.....x..x::......x::.....-....::xx.::...------.:....-....----...::.x..:.x..-...x::...x.:.:.:.:.-......x... 11M2I13M1D22M2I114M2I66M1I14M6I6M1I4M4D14M1I19M1I10M 217/293 74.1% 309/94230402 0.0% 21/293 7.2% 83976326 NA +9251 chr4 + 190214555 123256002 123256001 123256186 185 CATTTTCTTTATAGGCTTTGATGCGGCCTGGAAGAATTGATAGAATCATCTATGTGCCTTTACCGGATGCAGCAACAAGAAGGGAAATATTTAAGCTGCAGTTTCACTCCATGCCTGTCAGTAATGAAGTTGACCTGGATGAACTCATCCTTCAAACCGACGCATACTCAGGAGCAGAGGTAAGA chr4 - 94230402 39276013 39276012 39276197 54954206 54954205 54954390 185 CATTTTCCTTGCAGGCTTTGCTGAGACCAGGAAGAATAGACAGAATTATCTATGTGCCCTTGCCAGATGCAGCCACTCGTGGGGAGATCTTCAGACTTCATTTTCGGTCCATGCCAGTCAGTGAGGAAATCTGCTTAGCAGAGCTTATTCAGCGCACCCACAAGTATTCAGGAGCAGAGGTAAAA .......:..::........x..x.:..x........x..:.....:...........:..:..:........x..xx.x:....:..x..:.::..x..x....:x........x......:.x...:.:x:.:.:.xx..:..:..:.xx.:x...x..:x:..:................:. 185M 134/185 72.4% 185/94230402 0.0% 0/185 0.0% 83979989 NA +3187 chr4 + 190214555 123279408 123279407 123279519 112 TCAAAAAACAAAAAAAAAAAGCTTTTATAGAACTAATGTATATAAAATATACATACAAGTTGGAAGTATAGCAAAGAGATAAATAACTCAGTTTCTGAAATTAGGAAAAGGT chr4 - 94230402 17881130 17881129 17881241 76349162 76349161 76349273 112 TTAAAAGAAAAAAAAAAAAAGCTGTAATAATGGTGCAGTCTCCTGAGAATACATTTATTTCTGCAGTATAAAATAAAATTAAATTCCTCAATCTCAAAAACTATTAAAAGGT .:....:.x..............x.x...:x:x.:xx..x.x:x:.:x......x:.xx.:x.x......:x.x.:.:x.....xx....:.:..x:...:..xx....... 112M 71/112 63.4% 112/94230402 0.0% 0/112 0.0% 105398278 84816277 +30889 chr4 + 190214555 123284089 123284088 123284970 882 TCTCTCCTCCCTGTCTGCTTTCCCTTTCCTCTACTGCCTTTAT-----------ATAGAATG---TCTGAGGGCTGTGCCCTTTTCCCAAAATATTTTGTTTTAAGGTGGGGGTTAGATCTTGGTACATTTTTTGACTTCCATGGAAAGTTTTG-TGTTAGTATGTGGTCCCATTTTTAACCTATTTGCAGACACCCCCGATTATCTAAAATCACTTTCACATGGGGCTGAGGTTAAGCTTTATTTCTTTTGGCATGTCCCTACCACAGCAGACACTTCCTCTTTGCCTTGAAAGGACAAAACGATGTTCAGCTGTCTGGGCTTAGGCCCAGTATTTGATTTATACATTATTTAATTTCCTCCTGAAAATTGGAAGCAGGACTTTCAGGAATAGAAGTCAGTATTTTTCATTTGTTTTAGAATACTTCTAGGTGTAATATAATCATCAGTGGTAGATGTCAGCATGATTAGGGGGTGACTTAAGGTAAAGCAAATAAAATGTGAATACAAAGGAAAATTATTTGACAATGGAGAAGTTCCGAAGTTTT-------TGAATAAT----------------------CATTATTGTAT--------ATGTTATTAGGTTTTGGGGGTACTACATTTTGGGGCACCTGTCTTCACTTTACCCAT-------TGAAGGAAAG------------ATGTCTATTATGTTATAGTTGCAATTGTTG-GGGGATTAGAAGTTTGAGGAAAATGTAATGTAACCCTTCCAGTAATTTTACAGAGGATTTTT------------GGATTCTCTGTCAGCTGCTACTGCATTTGTCTTCACAATTAAGTTCATACGAATGCCAGGATGTGAATGCCAAAATAGTTTGAGATTTTAACA-GCAGTGAACTCAGGAAATTAAAAATTAACTCTGGAA---ATACTATTTCATGTTTTACAACCACTTTTGGATAGTGTGTTC chr4 - 94230402 39299277 39299276 39300218 54930185 54930184 54931126 942 TTTCCCCTTCCTGCTCGTCTGCTCTTCCTCCTGC--CCTTCACGCTCCACTCCAACATAATGAGCTGCGAGGGCCGCACAGTTCCCCCA----------------GGTGAAGGTCAGCCCCTGATAGATTTTT-GATCATCGCGTAACGTTCCGCTGTTACTATGTGGTCCCAGTTTTAACCTCTTTGCAGATTCCCTCGATTATCCCAAATCACTTTCACATGGAGCTGAGGTTAAACTTTATTTCTCTTGGCTTGTCCCTTCTGTAGCAGACACTTCCTCTTCACTTTGAAAGGACAAAGCGATGTTCAGCTGCCTGGGCTTGCGCCCAGCATTTGATTTATACATTATTTAATTTCCTTTAGAAAATTGGAAGCAGAACTTT-AGGAGTGGAAGTCAGTCCTTTTCATTTGTTTAAGGAT-CTTTTAGGGCTAATATAATCATCGATAGTAGATGTCAGCATGATTA--GGGTGACTTAAGGTGAAGCAAGGAACGC-TGAATACCGGGGGAAATTCTTCCATAATGGAGAGGGTGCCAAGATTTATGGCCATGCACAACATCTGCAGGTTTGGAACTGCGGCATTAAAAAATGAAATGGAAAATTGTCAGGTTTT-TGAGTGATGTG-TTCAGGACACCTGTGTCCCCTTACCGCATGGCAGACTGGGGCAAGGTTTGTAAGGTTTGTGCCCTTTACCTTACATCTGCGATCATTTCTTGGACTGCAATGCTTTCTGGAACTTCATTTCACAAACTAACTAATTTTGCAGAAATTTCTCAGTCAGTCCGGAGGTTTGCATTTGGGCTGACGCTGCATTCACTTCTGCAATTAGGTCTGCAC--ATGCCGTCAAGTGACTGCCAAGACAATTTGAACATTTCTCATGCAGTGAAGTCAGGAAATTAAAAATTAACTCTGGAAAGGACATCATATAATATTTGGCAGCGTGCTTTGAATACGATGTCC .:..:...:....:::.::.x.:...:.::..:.--....:.:-----------.:.x....---.x:......:.::.xx..::....----------------....::...:..x:.:..:..x......-..::x:.::.x..x...::.-.....x............x.........x........:x...:........:x.................:...........:..........:.....x.......x.:::.................::.:.............:.............:........:x......:............................::x...............:.....-....:.:.........x:.............x..:..-...:....xx.............::.:...................--..............:......:x..x::-.......x::..:.....x..:x.:........:.x.x.x...x...-------..x.:..:----------------------.....xx:x..--------.x:..:.:.......-x.:..:x.:::-..::..:.......x.:.x...xx.x...-------..::.x..:.------------:..:.:x...:x...:.x:...:..::..x-xx...:.:x..xx:.xxxx::..:x.x..x.x..xxx::x.x.......:....::x..:.:------------..x..x:x.x.x:....x::.......::::.:::......:..::::..--.....:xx.x....x......:.:.:.....:xx...xx..-........x...........................---.:.::..x.x..:...x:..:.xxx:....:...xx:...:. 34M2D7M11I8M3I24M16D28M1D20M1I230M1D37M1D46M2D28M1D47M7I8M22I11M8I15M1D11M1D29M7I10M12I30M1I62M12I50M2D41M1I36M3I42M 620/854 72.6% 942/94230402 0.0% 116/854 13.6% 83984812 NA +12214 chr4 + 190214555 123298628 123298627 123299098 471 AGTCCCCTTTGCTTAAAGTTACCCTGGTCATGTTTATTACAGCATGTAAAGGTACATAGCCTTAAAGTCTTTTCAG-GACTTGGGATTTTTCTT------AAAGAAAACAAATCAAGAGTGTTCATTAAAAGATTGATATAAAAAATTAATAATTCTGAAGTTAACCCAAAACTTAATGTAATCTTCCATTGGAACATTTGT-TGATGTGTGTGGGGGGTTTAAATTCCACAAATATTATTAAAATGAGCAATCAGCAGCAAG--ATGTTTTAAAATATTTTGTTTCAGCATGTAAAATCTCGTTTTATTACAGAATTATTTTGTTAAAGGCACAGCTATGCCAGGTTGCTGCCAGAGTGATAGGAT-CATAACAGCCCAGTTAATTTTAAAAGACTCACAAGTGGTA----GGCCTTGGAACTACTGATGGCAACATGTACATCACAT-TTTAGTATAATGCTTAAACTTACACCACATCTTGTGA chr4 - 94230402 39304196 39304195 39304659 54925744 54925743 54926207 464 AATTACTTTTAATTAAAATGAACACGCACATATGTAT------GTGTACATACAGAAAGACT----GTTTTTCTAGTGGCTTGGCTTCCTTTTTCTCACTGAAGGGAAGAAGTTAAACTTTCTCATTAAATG-TTTATATAAAAATGAAATAATTCTGAGGTTAACCAGAAATGCAGCTTAATCTTGTATAGAAACATGTGTGTGATTCTTTT-------TTCAGTTGCACAAATATAGCTGAAACTTGAAGTTGGCAGAGAGTGCTGTTTAAAAATATTTAGTCCCAGCATGTAAAAACTCGTTTTGTTACGGAATTCCTTTGTGAAAGGTGTAGCTATGACATGTCTCAGCCAAAGTGATGGGATCCATATCGGCACAATACATTTTGGAA-----ACTAGCTGCATTTTGGGCTTGTAGTTACAGAAGTTAAATTGGAATTTACATGTTTTATATATTGCTTGGAAGGATACCACATCTAGTAA .:.:x.:...:x.....:.x.x.x:.xx...:.x...------:....x.x::.x.x..x..----..:...::..-.:.....xx.::..:..------:...::..x..:.:..:xx.x:........x.-..x.........xxx...........:.......x:...:x:.::x.......x:..x.:.....x...-....x:x.x.-------..x.:..x.........x::.:...:xx.x.:.::....x:..--x.....x.........x..::............x........:....:.....x:.....x.....:::.......x..x..:x.x....:......:....-....x.:..x..:.xx.....::..-----..x..:x.:.----..x....x.::...x..x.x:..xx..x.xx.:....-...x:....x.....::.xxx.:.........x..:. 37M6D19M4D10M1I17M6I32M1D69M1I10M7D43M2I102M1I25M5D10M4I37M1I37M 308/448 68.8% 464/94230402 0.0% 39/448 8.7% 83994432 NA +3027 chr4 + 190214555 123303751 123303750 123303802 52 ACCCTGTCTTCAACAAAAACAAACAAACAAAAACAACTTTGAATCAGCAAAA chr4 - 94230402 75299501 75299500 75299552 18930851 18930850 18930902 52 ACTCTGCATAGAACAAAAACAAACAAACAAAAAAAACTTTAAATTGTTAAAA ..:...:x.xx......................x......:...::x:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 48004250 NA +11115 chr4 + 190214555 123304333 123304332 123304778 446 CTCCCAGGTAGCCTCCT-CCTTGAAGCACCTCCAGTGCATG-TGTTCGCAAACAGCAGGACATCACTCT-CTACTGGGTTCCTAATCCCTCAGACACACA----------------------------GAGGAAGGAGGTCGCAAGGCTGTGAAAGTGAAAAGAAAAGCGAGGGGGCGGGTGAGCAGAGGCAACACAATGT-----CAGCGCCTGGGCCCTCCAGCGGCTGCAC-CACAATCATCGCCAGCTGCAGCCCAATTAAGCTCAACAGGTCACAGGTGTTCCAGACAGAAGATGCTTTTAACAAAACCACTTTCTTGAAAATACCTAAGACTTTTTGAAGCACTGCAGCCCATTTCTTT--------TGGT---------------AGATTCTTTAAAGCTATTTAGTACCCTTCAAATACAAAGAAGCTGAGAAGCACATTTCGGCCTCAGTGGAAGGC--GTGCTTGCTTCATGCAGAACAGCGGGGGCAGCAGCCAGGC chr4 - 94230402 39306731 39306730 39307193 54923210 54923209 54923672 463 CTCGCAGGTAGCTTTGTGCCGGGCAGCTCCCCACGT-CGTGCTATTCACAAACCGCAG--CACCATTCTGCTTCCAAGCTCCTAATCCCTCTTACATACAATCCCTTACAACTTCAACTGGTGGGGTGGAGGAGTGAGTTAAAAAGG------AAGGAAAAAGGAAAATGA--------------------AACACAATGTGCAGGCAGTGTCTG------CCTGGGACTGCGTGCACAATTGACACCAGCTGCAGCCCAATTAAAGCCGACAT-TCACAGGTGTTCCCCGCAGACCCTGCATG-AACAAAACCACTTTCTTGAGAATACCTAAGGCTTTC----ACACAGAAACTCGTTTCTTTCTTGCTTTTGCTTTTTCTTTTTTTTTAAGATTCTTTAAAGCTATTTAGAGCACTTTAAACACAAAGAAGCTGAAAAGGACTTTCATTCCCCAGGAAAGGGCTGGTGCTCACTGCCAG--GAGCAGGGAGAGC--CAGCCCAGC ...x........:.:x.-..xx.x...x..:.xx..-.:..-.:...:.....x....--..:..:...-..x.:::.:............xx...:...----------------------------.....:x...x.x:x....------...x:.....:...::..--------------------..........-----...:.:...------..x.x.:....::-......::x.:...................:x:.:...x-.............xx:....xxx...x.x-...................:..........:....:----:...x.x.:.:.:.......--------..x.---------------.....................x:.x...:...:.............:...x..x..:xxx..:...x::.:...--.....::..x.xx.--..:...x.:.:..--.....x:.. 17M1I18M1D4M1I16M2D9M1I30M28I19M6D18M20D10M5I9M6D13M1I39M1D29M1D36M4D20M8I4M15I74M2I14M2D13M2D9M 303/401 75.6% 463/94230402 0.0% 107/401 26.7% 83997602 NA +3910 chr4 + 190214555 123304531 123304530 123304582 52 CACAATCATCGCCAGCTGCAGCCCAATTAAGCTCAACAGGTCACAGGTGTTC chr4 - 94230402 3789649 3789648 3789700 90440703 90440702 90440754 52 CACAGTCAGCACCAGCTGTAACCCAATTAAACTCAACAGTTCACAGGTGTTC ....:...x.:.......:.:.........:........x............ 52M 45/52 86.5% 52/94230402 0.0% 0/52 0.0% 119514882 70699673 +36070 chr4 + 190214555 123312694 123312693 123314066 1373 TTCAGAAAAACATTAACATGCATAACCACTACAGTTAACTTCGGCGCTCATTAATGAAGCCCAGAACTAATAGTTACATTGTCGTAATTTGACAAAGCCATCTAAATCTATGCATGTTTT----TGAAAGCTCCCTAAACATGCTGCTAAATCCCCTAAAAAGCTACTAAACTGCTTTGGCAGCCATTAGCCCAGCATAAGCAGAGGAACTCTTTTCAGTGAGTGAACAAACAGAGAAAATACGCTGAATGGATGGACAAATGTGTTTCAGCTGGCCCTTTCATTTACCAATATAAGGGCGCAGTCAATATCAATCACTGTTTTCCCTGTTGCCCTGAAAATCACAATATCTCTTTTCATCCCACAAGCTCTTTTCACTACCGTAATGTGTCTTTAGAATGACACTGGCATCAGCCTGCTTCCGCTGTCTGAAGTCCAGAGAGCTTAAAAACACATTTCGGGATTCTTGAACCTTCCTCCCCTTCCGTTTTCCTACTGCCTCCTCCCTCCTCCCTCTGCATCCATTCCGCCCCCTCCCCAGATTCTTTTCAATTCTTCCAGCTTTCCTGGCTGAGTAAACAGCATTCACTTCTCTGTTCTAATGCAGCTCTCCAAAGTAAATGT------------TGACAACCCTATCTGATATTCCTGAGATTTAAGAACTCATTAAAGAGATACACATAAAGAAATGCTTTTACATGTTGG-----TAATACATCAAAGGTTGAAAGGAATGTGGAAACTCTGTGCTATGACACGGTGTGTTGATGAGCAAGGCCTCACTCTGTATCAGAATATCTCCCCCTCTGCCCTCCCTTGACCGTTGGCTCCCGCCTCCCTCCACCACATAGAGACATGCATCCTTTGCCATCCCTTGTTAAAAGTATGTGCGTGCACAGCTACCTACCCTTACAGTTAAGAGCAAATGCCCTTAAAAGCAAATGCCACTTCTTAGATATCTTTTGGCACTCCTGGTTCTGAGTACTTAATACGTTGCTTTGGGATGAAGGAAAGAACAGAATGCTCTGTATATGATTACCTTTTATCCTTTTGAAAACTTGAGTGGACTAATTCTTGCAGATAAATTTTAGCAATGGGCATTTAGTTGTAGAAGGTACCACAGATGAATATTTGGAATATTATGTTTCTAAAAGAGTACTGATTGTTTTCTACCTCCTTTTATTTACTTATTTTTTAAA----------------------------ATTTCAGATTGTAGCTGTCTGCAGAGAGGCAGCTCTTCTGGCTCTGGAAGAAGACATTCAAGCCAATCTCATCATGAAAAGACATTTCACTCAGGCCTTGAGCACTGTGACACCTAGAATTCCTGAGTCATTGAGACGTTTTTATGAAGATTATCAAGAGAAGAGTGGGCTGCATACACTCTGAGA chr4 - 94230402 39310130 39310129 39311259 54919144 54919143 54920273 1130 TCCCGAAGTGCATTAAAATGCATAACAGCAGTGTTTAGCTTCACTGTTCATTAGAGCAGCACGGAACTAAAAGTAATATTGTTGTAACTTGACAAAGCCATCTAAATCCATGCATGTTTTCTTGTGAAAGCTTCCTAAACATGCTGCTAAATCCTCTAAAAAGCTACTAAACGGCTTTGGCAACCATTAGCACAGCATAAGCAGGGGAACTCTTTTCAGTAAGTGAACAAACAGAGAAAATATGCTGAATAGCTGGACAAATGTGTTTCAGCTGGCTCTTTCATTTACAGATATAAGGGAGCAGTCAATATCAATCACTGTTTTCCCTGTTGCACTGGAAATCACAATATCTCTTTTCATTCCACAAGCTCTTTTCACCACAGCAATGTGTCTTTAGAATGACACTGGCATCAGTCTGTTTCCGCTGTCTGAAGTCCAGAGAGCTTAAAAACACATTTCAGGGTATGAGA----------------------------CCTTCACCCCCCTCCCCTTCCACACA------CCCCTCTC----------------CTTCGAGCTTTCCTTGCTGAATTAATTGGTTTTACTTCTT--TCCCAGCTTAAAGTTTAAAAGGAAAAGTGCCCACGGAGCCTGGGAA---TATCTG---CTCTTGTGCTTTGGGG-----------------ACAGAAAAATGTATTGCTGCTTGCTGGGGTTTTAATTTATCAGGTGTTGCAGAG--------------GGGTTAAGGCAAGGTAATATGATTATCAA-----------------------------------------------------------------------------------------------------GTTAAAGCAATTTGC---------------------------AGCGTACTCGCGCATTAAACGTAATGTTACT--GTGGTTTGAATTTGGAGCTC---------------TATCCCGTTGCT----------GGGAAGTGC---------------TAATCACCCACAGCCTCGTTT---ATTTAAATGAA----------GAGAAAAGTGTCAG----AGGAACTCTGTCCTAGCGAGTATC------TGGTGTTTGGAATG------TGCTGATAACCTCGTGCTTGCTTTCTTCAT--TTCAAGCTA--TACATTTTAAAGTAATAACATGGTGGGATGCTTTGTGTCGTTGCAGATAACGGCAGTCTGTAGAGAAGCTGCCCTGCTAGCACTTCAAGAAGACATCAATGCCAAATGTATCATGGGACGGCACTTTCGGGATGCATTGACGGTTGTGACACCAAGAATTCCTGATTCCTTAATCCAGTTTTATGCAGATTATCAGCAGCAAAGTGGACTGCACGCGCTTTGAAA .:.x...:x:......x.........x:.x:::x...:....:x:.:......:x.x...x.:.......x...x.:.....:....:....................:...........----........:.....................:.................x.........:........x............:...............:.....................:.......:.x.......................:...........x:.........x.................................x...:......................:.................:..x.:..............................:...:........................................:..:.x:xx..----------------------------...:.x...:......::.x..:x..------......:.----------------....x.........x.....:.x..:x.xx..:......:--.:.:.::x:.:xx:.:x....x...x..------------..:x..---......---:..:..x.x...::.:-----------------...x...:.x:.::.x:.:.x..:...-----....x:....::x....x.::.--------------.x.:..x.:..x...:xxx....x.x...-----------------------------------------------------------------------------------------------------......:xx..x...---------------------------..x.:.xx:..x.x.x...xxx....::...--x.:.x.xxxx.....x:...---------------..x:x.......----------..:...x:.---------------.:..:...:x:x::.::x..x---.:..:.:..:.----------x...x..:.x.:..----:..x.:.:x..:x...x::...:.------x::.:........:------.x..:.x.:xx.xx..x...:.....x.x.--..:x.x:..--..:x.......----------------------------:..x.....x:::..x.....:.....:..x..:..x..:..x..xx..........:x.x.....x:x:......::.x.:..:..:xxxx.x..x....xx::.........x...........x..x..:.xx.:x.......x.........:x..x.:.....:.....::.:..:...:. 120M4I346M28D26M6D8M16D40M2D28M12I6M3D6M3D16M17D27M5I22M14D29M101D15M27D31M2D20M15D12M10D9M15D21M3D11M10D14M4D24M6D14M6D30M2D9M2D11M28I186M 807/1081 74.7% 1130/94230402 0.0% 341/1081 31.5% 84002564 NA +4673 chr4 + 190214555 123323035 123323034 123323161 127 AGAAACTGTGGT---GTGTGTGTGTGTATACATATATACACATATATATACACACATATATATATACATATATATACACACATATATAT--ATACATATATATACACACATATATATATACATATATATACA chr4 - 94230402 73121086 73121085 73121213 21109190 21109189 21109317 128 AGAAACTGTAATCTCGTGTGCATGCATATTC----ATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .........::.---.....::..::...x.----...........:.:.x.x:...:x:..:....:....x:.....:x:.....:.--:........x....:.x..:.x.x.:.:....:....x:.. 12M3I16M4D54M2I41M 88/123 71.5% 128/94230402 0.0% 9/123 7.3% 50201949 NA +3266 chr4 + 190214555 123323045 123323044 123323107 63 GTGTGTGTGTGTGTATACATATATACACATATATATACACACATATATATATACATATATATA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....:........:....:.:.....::..:...x..xx.:x:..:.:...:......:.:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 76227881 NA +3447 chr4 + 190214555 123323065 123323064 123323176 112 ATATACACATATATATACACACATATA----TATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAAC ..x..x.........:.......:.:.----:...::...:x:x:.x::.....:...xx.x:...x..x...:........x...x..:..::-:.:.x....xx.:.....x.. 27M4I63M1D21M 75/111 67.6% 115/94230402 0.0% 5/111 4.5% 118905722 71308833 +3057 chr4 + 190214555 123323081 123323080 123323141 61 ACACACATATATATATACATATATATACACACATATATATATACATATATATACACACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .:...x..::...:.x.::......:....:...:....:.x.......:x...:...::. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 115726668 74487887 +3057 chr4 + 190214555 123323085 123323084 123323147 63 ACATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x...:...:....:.:x..::x::....x.:...::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 105802336 84412219 +3619 chr4 + 190214555 123323087 123323086 123323215 129 ATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATATACATATATATATACACACACATATATATACAATGGAATACT chr4 - 94230402 4417343 4417342 4417468 89812935 89812934 89813060 126 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATAAACTGAGCAATGCT ..x..x.:...:...:.:.:.......x:x.:...::...:x:x:.x::.....:...xx.x:...x..x...:........x...x..:..::---:.:.x....xx.:.....x..x:x.x...:.. 94M3D32M 80/126 63.5% 126/94230402 0.0% 3/126 2.4% 118905744 71308811 +3057 chr4 + 190214555 123323107 123323106 123323167 61 ACACACATATATATATACATATATATACACACATATATATATACATATATATACACACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .:...x..::...:.x.::......:....:...:....:.x.......:x...:...::. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 115726694 74487861 +3057 chr4 + 190214555 123323111 123323110 123323173 63 ACATATATATATACATATATATACACACATATATATATACATATATATACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x...:...:....:.:x..::x::....x.:...::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 105802362 84412193 +3157 chr4 + 190214555 123323133 123323132 123323194 62 ACACACATATATATATACATATATATACACACATATATATATACATATATATATACACACAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC .:...x..::...:.x.::......:....:...:....:.x.......:x..::...:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 115726720 74487835 +3269 chr4 + 190214555 123323139 123323138 123323213 75 ATATATATATACATATATATACACACATATATATATACATATATATATACACACACATATATATACAATGGAATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.::...x.:..:...x:...:..:...::x.....xx...:.:.........:.:.x.:....xx..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 114927343 75287212 +3027 chr4 + 190214555 123352176 123352175 123352229 54 TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACACACAGAAATAAGG chr4 - 94230402 6076402 6076401 6076455 88153948 88153947 88154001 54 TTAAAAAAAAACAACAAAAACAAACAAACAAAAAAAACCCACATAGAAACAGAG ..x........x..x.....x...x...x.........x....:.....:.::. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 117275774 72938781 +7187 chr4 + 190214555 123352708 123352707 123352909 202 AAAAGGAACACAGACTTAACATGTTATATAATCACTCTTAAACCACCTCTGGGAAGTTCTCCAAGCCCTGTGTGTCAGTCTCCA--TTGTGCTTGTCTGGACACAACCTCTACAAGAATTTCTATTTTATAAAGCAGGGTGGGGAAATGCCCAGAGACAGAGCTGAGTCCAATTGCAAGGTGACT------------TGTTATGGGGGAGCTAAAG chr4 - 94230402 39320331 39320330 39320540 54909863 54909862 54910072 210 AACAACAACACAGATTTAACATGTTATATAATCTCTGTTAAACTTGCTCTGGGAAATTCTCCAGCAGCTA-GTGTCAGTCTCAATTTTGTACAAGTCTGTACATAACCTTTGTAAGAAT-----TTGTATGAAGTTGGGTGGGGAAACAGTGAAAGAAGAAGTTAGAACAGAATGTAGTCTGACTGAAGTCTTGCTGTGATATGGAGCAGTGAAAG ..x.:x........:..................x..x......:xx.........:.......:xxx..:-...........x.--....:.xx.....x...:.....:.::......-----..x...:...:x...........::x:x.:...x::..:.:::x.x:.x..:.:xx.....------------..x.....:.x..:x.... 70M1D13M2I33M5D61M12I19M 142/196 72.4% 210/94230402 0.0% 20/196 10.2% 84032377 NA +3001 chr4 + 190214555 123373001 123373000 123373060 60 AGCCTGGGCAACAGGCTGTCTCAAGAAAGAAAAAGAAAAAGAAAGAAAAAGAAAAAGAAG chr4 - 94230402 55704972 55704971 55705031 38525372 38525371 38525431 60 AGCCAAAACAAAATACTGTTCCAAAAAAAAAAGAGAGAGGGAGAGAAAAAGAAGAGGGAG ....x:::...x.x:....::...:...:...:...:.::..:..........:.:.:.. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 67668029 NA +3155 chr4 + 190214555 123373076 123373075 123373156 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGGAGGGAGGGAAGAAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx...:.:::.......:x:..:.x..:::...:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 86514782 NA +3011 chr4 + 190214555 123373088 123373087 123373168 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAGGAGGGAGGGAAGAAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:...........x..x.:xx.::.:.:....:.:.:x...:.x:.:::...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 86514794 NA +3355 chr4 + 190214555 123392473 123392472 123392577 105 AACATATTTTTAAAAAAACTCTTTTGGGAAGTTTT----TTATGTTTTCTTTTCTTTTTCTTTTTTTTTTCTTT-----TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 40193264 40193263 40193377 54037026 54037025 54037139 114 aaaatatttatttaaaatCTTTAGTGGGCATTATTGGAGTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGA ..x......x.xx....x..:.xx....x.x.x..----..:.x.:x........:.:...x.:....x::::.-----...x:................:.....::.:x... 35M4I35M5I35M 74/105 70.5% 114/94230402 0.0% 9/105 8.6% 83199209 NA +3003 chr4 + 190214555 123392489 123392488 123392539 51 AACTCTTTTGGGAAGTTTTTTATGTTTTCTTTTCTTTTTCTTTTTTTTTTC chr4 - 94230402 15430436 15430435 15430486 78799917 78799916 78799967 51 AACTTTTTTGGGTGGTTTACTTTGTTTTTTTTTCTATCTTTTTTTTTTTCC ....:.......x:....x:.x......:......x.:.:.........:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 107962053 82252502 +3084 chr4 + 190214555 123392534 123392533 123392596 63 TTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGC chr4 - 94230402 5847633 5847632 5847695 88382708 88382707 88382770 63 TTATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..x..x.x:....x.x:..............:.::.........x.xx.........:x.:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 117544901 72669654 +23965 chr4 + 190214555 123403238 123403237 123403772 535 TCTTCACTCTAGCCTTCGTATTTGTGAAGGACTCAGCCACCTTCCTTCTTCACCCCATGCTTCTCACCAAATTTTTGTTGTC-ATTGAGGGCACTTGGATAACTCAAGTTGATATT-----TATAGCTGATCAATCTATATGTGTCACAGAACTATGCTGCCTAAAGTGATCTTGGCTCCTTAATGGTCCTTTTGGCCCCTTGGAT------AGTTAACA---------GCTGAGTAATTCTAATCTCTTCTGTGTTTTCCTTGCCTTAACCACAAATTGTGGTGCT-TTTTGTATATTTTATGTATAAATCACAAAGTTGAATTCTGACTATTTTTAAGACAAAAGTCTGTTAAA--CTTTTTTATTGTAAAGAATATTTATTATGCGAATCTCTATTATTTTATGGTATTTATTGCAAAA-GACTGTTGAAATGTACTCATGTTTGAATATAACAAAATATCAATACTTAACGGAAAATAAGG-TGACACGAAGAAAGTACATATGTTAACTATAATGCAGAAAATATATTAATTAATGAAACTGTCTCTCGATTTCTT chr4 - 94230402 39333451 39333450 39333988 54896415 54896414 54896952 538 TTTTTTCTCTTGCTGTCA-ATCTTTGAAGGATATTGC------------TCACTCCACCCTCCTCCTCCTGTTGTTTCAGTCCATCAGTATCACGCCGATA-TTAAAGTTGGTGGTGTTCGTGTATCCAGACAGCCTTCAGGTGCCATTGAGTCA------CCTAAGTGTTCTCGAATCTTTACTGTTTCTCGTGATCCTTTGGTTTAGTGGATTTAGCTCTGCTCTGTACTTTATAATTTTATTCTGTTCCCTGTTTTA-TTGCCTTAGCCACAAATTGTGGTCCTCTTTTGTATATTTTATGTATAAAACACAAAGTTGAATCCCAACTATTTTTAAGACAAAAGTCTGTTAAAACTTTTTTTATTGTAAAGAATATTTATTATGTGAATCTCTATTATTTTATGATATTTATTGCAAAAAGACTTTGAAAATGTACTCATGTCTGAATATAACAAAATATCAATACTTAACG--AAATAAGGATGACACGAAGAAAGTACATATGTTAACTATAATGCAGAAAATATATTAATTAATGAAAATGGCTCTTGAGTTCTT .:..:x....x..:x..:-..:.x.......:x:x..------------....:...:x..:...x:.xx:..x..x:x...-..:::x:x...x:x....-:.x......:.:x.-----.:..x.:::x..::..x:.x...:..:x..:::.------.:x.....x...:.:x..:...x..x.:..:x..::..:....x.------.x...:.x---------:..xx:.....:..x...x...:x......x-........:..............x..-......................x.............:.::............................--:............................:...................:..............-....x.x:..............:.............................--........-..........................................................x..x....:..x..... 18M1D18M12D33M1I18M1D14M5I34M6D45M6I8M9I31M1D26M1I68M2I64M1I52M2D8M1I75M 409/512 79.9% 538/94230402 0.0% 49/512 9.6% 84069787 NA +28538 chr4 + 190214555 123418389 123418388 123419138 750 GAAAATTGGGAAGACTACGTAGAAATCTAAACGATGTGTGTTACTCTCAGAGCTAGGAAACTAGAGCCAGGTCTCATGGCACTCTAATTAAAAACTTTTATTTCTGCAGATTTATTCTGTGGTCCTTACTGAACAGATCTGCCTTGGGTTTCTGCTGGTGAGTTTTTCAGCAGGAATGCAGGCTTTGTTTCTTTGAATAGTTGAGTGCAGATTAGTGGTATGCCAATTTCCTGTGGCCTTTCAGAGCTGCAATTTGAGCCCTGTTTGCTCCTGGCCCTTGCACAATTGAAAACAATGGGTGACTTCTTTTAGGTTTCACTTCAGGGCTCTTAGAAACAGGGGAAGTGGCTAAAGCCCTACTTTACAGGTAATTAACAATAGATAATGTTTGCTCTGCA-----------------------TTTTTTAGAGCCGATAAAAGGTAGAAGA---ACATATTCAGCTCCTGATTTAGACACTGTGCAGTGGTTTTATGGATACAATAGCTGTCTTAGCATTAGCAAGGTGGCATGGAGTATCATATATATCTGACAGCACAAAAGTTTTAAAAAGCAGAAGAAAAAAGAGTATTATT----AAAACACTGAAGAGTAACCAAGAAAGCACTCCCTGGAAG-------------ATGCTAGAGAAACAGCGTCATTTTAAGCCATGCATTTTGACTCAGG-----------CTGTA-AATCTATATGTTTTATGAGGTGAACAATTTTCATAACTTGTTGACATTTATTCAAGG----------TCTTTTTGTGTTTTACACATAATTCAACTCTAGAA chr4 - 94230402 39339646 39339645 39340407 54889996 54889995 54890757 762 GGAGATGTGGGAAACGAGGCAGGGCTATAAATACGACACGGTGCTCTCGGGGCT-GGAAGCTAGAGCCATATCCTATGGCCTTCTAATTAAAAACCTTTATTTCCACAGATTTATTCTGTGGGCCTTACTAAATAGATCAGCCTTGGGTTTCTAATGGTGAATATTTTAGGAGGAATGTAGCCTTTGTTACTATGAATAGTCGGGAGCAGATTACCGGGATGCCAATTTCCTGTTGCCTTTCAGAGCTGCAATTTGAGCCCTATTTGCTCCTGGCTCTTGCACAATTGAAAACAATGGGTGGCTTCTTTCAGGTTTCACTTCAGAGCTCTTAGAAACTGGGGAAGTGGCTAAAGCCCTACTTTACAGGTAATTAACAATAGATAATGTTTGCTCTGCGGttcttctttttttttttttttttttttAAGGGCTGA-AGGAGGTGGAAGAAGCACACCCTGAGCTCCC------AACACAGCACCGCAGTTTTGCGG--CCGAT-----------------------------GAGTCCCACGTACAACCAAAGGGATAGAGG----GGAAAAGAGGGTAGAGAGGCGTTTGGTTGCTAGCAGGGCTGCAGGATGAGCAGCAAAGCCCGGCCAGGCCGCCCTCTTCCACCAGTGC--GAGCGTTTGCTGCTGCTGCGGACCTGCTCTTTGATTTAGGGCCCGTTTTTATTGTATCCTCTATCTCCTTTATTAGGTGCGCACTTCTCATACCTTGTTGACATTTATGTAGGGCGGTTAAATATTTTCTTATGTCT--------ATTCAATCCTAGGA .:.:..xx..:.:..x.x.:..::x.x....::xx::::.x.:.....:.:...-....:.........x:..::.....x:.............:........::................x.......:..:.....x.............:x......:.x...:..x.......:..x.......x..x........:.:.x........x:..x...............x...........................:............:.........................:.......:..............:............x...........................................................:-----------------------.....x..:..:..-.::....:.....---...:x:.x......:------:....x.::.x.::.....::..--x.:..-----------------------------....x:..::..:.x.::.x:.x.:.:.:.----::...:x..::x.:.:.:.x..x.x:..----:x.:x:...x..::.:.x..:x.....x.xx..x..xx.-------------:...--...x:x:x..xx.xx:.xx:.x.x...x:.....:.:...-----------:....-xx.....x.x:.....x.....x:..x..:.....x...............x:.:..----------.:..:..:...:.--------......::....:. 54M1D343M23I14M1D13M3I15M6D23M2D5M29D30M4D28M4I39M13I4M2D40M11I5M1I57M10I13M8D14M 524/697 75.2% 762/94230402 0.0% 118/697 16.9% 84078743 NA +3020 chr4 + 190214555 123439887 123439886 123439941 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTAATGCCTTAGCCATCTTTGAT chr4 - 94230402 62760453 62760452 62760507 31469896 31469895 31469950 55 AAAAAAGAAAAAGAGGAAAAAAAAAAAAAGTTTTACTGTTCTATCTTTCTGTGAT ......:.....:.::.............x.....x..:::..x.:x...x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 60679434 NA +26886 chr4 + 190214555 123444231 123444230 123444774 544 CCTCTCTCCCTGATTTTTCTAGGTCTGGGAAAGCTGGTTTTATATT----------------ATGCAAAAGTGTGAATCGCACAGCCCAGAGTCACTGTCCCCTTTAAAGGGGGCTTTCTCTCTTGTCTTAAAAAACAGACCTCAGAAGGAGCCAGATGGTTCCCGTCTGCTGCCTTGAGTCAATGCACTTCCTCCCACAGACTGGAGCCCTTTTGCCCTCCTTCCTCCCCAGCTCCTCCCCACATTCTACCCCCCACCACTGGGCCTCCCTGTTTTGTCGCTAGAAATAATCTTTTATTGCCCAGTTGTTCGGAAGTGACCTTTTGCCCTTGATTAGATAGCACCAGGCTCCATCACCGGATTGCTTTTGAGCGGGCAGTTGCTTTTTTGTGTGGGCTGATCCGGTGTCAGGGAGAACAATGCAAGGCTTTGCAAAATTTTAGTATAGCTCAGGCCTCATGTGGAACAGGTGGGGGCGGGGAGACGCGGGGTTGAATAAAGCAGCCCAGTGGATCCTG----GTTGCAAAAATACATTTTCTTTAGTAAACTGAAAAACAAAT chr4 - 94230402 39346022 39346021 39346560 54883843 54883842 54884381 539 CTCCCCTTCCTGGTCCTGCCGCGCCTGGGAAAGCCACTCTTAAATTCGGGGGGGTGGGGGGGAAACAGAGGCCTGAATTGTT--GCGCGGAGTCAGCGGCCCCGCTGA-GGGGGCTTTTTCTCTC-TCCTGGAGAACAGACTGCGCACAAAGCCAGATGGTTCCCGTCTGCTGGCTGTATTCAATGCACTTCCTCCCACAGACGGGAGCCCTTTTGCCCTCCTCCCACCCC----------CCCTTTCAAGCATCCACCACGGGGCCTTTCTGTTCCGCGGCTGGAAATAATCTTTTATTGCCCAGTTGTTCGGAAGTGACCTTTTGCCCTTGATTAGATAGCACCAGGCTCTATCGCCGGATTGCTTTTGAGCTGGCAGTTGCTTTTTTGTGTTGGCTGATCCGGTGTCAGGGAGAACAATGCGGGGCTTTGCAGAATT----------TCGGGCCGCGTG-GGGCTGGCTGGGGGCAGGGAGGCATGGCGCACTGGAGAGCGGCCTCACGGGCCGTGATTAATTATAGGAAAACTTTTCCGTTAATAAACTGCAAAACAAAT .::.:..:....:.::.x.::x.:..........::x.:...x...----------------.x:..:.:.:x.....:.:x--..x.:......x:.x....x:.:.-.........:.....:-..:.::.:.......:x.:x.x::.......................x..xx.x.......................x...................:..x....----------.x.x...x.x.x:.......x......::.....::.:x...:....................................................................:...:.................x...................x.............................::.........:....----------..:....x.:..-..:x::.x.......:.....:.::..x.:xxx:x.:...:...:x::..::.x..----:..::.::..x..x...:.x...:.......x......... 46M16I20M2D24M1D16M1D105M10D199M10D12M1D56M4I41M 405/519 78.0% 539/94230402 0.0% 45/519 8.7% 84098209 NA +3322 chr4 + 190214555 123447369 123447368 123447430 62 CCCTCTCCTCTCCCCTCCCCTCCCCTCCCTTCCCCTACCTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 7504480 7504479 7504541 86725862 86725861 86725923 62 CTCTCCCCCCTCTCAGCCCACTGCCTCTCACTCCCTATCTTTTTTTTTTTTTTTTTCCTGAG .:...:..:...:.xx...x::x....:.x::.....:..................::.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 115942889 74271666 +3540 chr4 + 190214555 123447372 123447371 123447425 54 TCTCCTCTCCC-CTCCCCTCCCCTCCCTTCCCCTACCTTTTTTTTTTTTTTTTTT chr4 - 94230402 84759162 84759161 84759216 9471187 9471186 9471241 55 TTTCCCCTCCAACCCCCCCCCCCTCCCTCCCCATACCCTTTTTTTTTTTTTTTTT .:...:....x-.:....:.........:...x....:................. 11M1I43M 46/54 85.2% 55/94230402 0.0% 1/54 1.9% 38688210 NA +3696 chr4 + 190214555 123461737 123461736 123461798 62 GCCTCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:x........:.x...x.xx.x........:..:.........:......x...... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 105264599 84949956 +11940 chr4 + 190214555 123463835 123463834 123464125 291 TTGCTTGTTTAAGCGTTTAAAAAAA--ATTCATTGAAATTTATCATTTTTCTCTTAAACCAACTCAAAATTTCGTGTGTGTGTGTGTGTG-TGTGTGTGTATGTGAAAAATGTCCCTAGGATCAGC--TCTATTTGCATTGGTATTTCCAGTGGAAATGTCAAGTGTGACCTTTTTCTTGTTTGGGTGTCTAATCCTATTTTAAAGCCCTGTCACGCCCCTGCCAAGGGTCAGTGCCCTTGTGAATAGAACTTCAGCACCTGCTAC--CCCTT---TCTTCTCCTCTTCTTCCCCTCTGAG chr4 - 94230402 39352647 39352646 39352925 54877478 54877477 54877756 279 TTGCCTTTATGAG-ATTTACATAAATTAGTCATCACATTTTATCATTTTCCTTTTA----------------CATATGTATGGCTATTAGATGTGTGTG-----AAAAAATGTCATGAGTATCAGAGGTCTATTTGCATTAGAATTTCCAGGGGAAATGTCAAGTATGACCTTTCTCTTGTCTGGGTGGCTAATCCCATTTGAAATTCCTGCCATGCTCCTACAGAGGGTCAGCGTGCTTGTGAATGGAAACTCTGCACCTGCTGCAGCCCTTGGCTCCTCTCCTCCTCTTCCTCCCTGGG ....:.x.x.:..-:....x.x...--.x....::x.x...........:..:...----------------.:.:...:..xx.:.xx.-........-----:.........x:x..x.....x--............:.x........x.............:........:......:......x.......:....x...x:....:..:..:...:.x:........:.:x.........:...x:..x.........:.--.....---..:.......:......:.:...:. 13M1D11M2I29M16D18M1I8M5D22M2I138M2I5M3I25M 211/269 78.4% 279/94230402 0.0% 32/269 11.9% 84111188 NA +16824 chr4 + 190214555 123470573 123470572 123471007 435 TTTAAAATTTCTAAAAACACAAAATGTTTCACAAATTGAGCTAGGTAATAGATGGATAAAATAAACATTGAGTTGCCTGACAAGTAGGAATTCCCCACCTCAAGTTTCTGAATTTTATACTAGAATTATTTTAAACATATGTGGTTATAAGCTTATCAGATTTCCAAAAATGAACCTTCTATAAAAATCACACTGGGCCCCTCAGCTGTGATTTCTTCCATTATTTATAGACAAATTGAAAACAAATGTTTTTTTC--------AAAAAAATACAATGAACTGAAAACAGCTGTCAGGATGTACTTTTTCTCTAGAATTCATCTGTAATACAGAAGTGTAGTAAACCAGCACTTAAGTCTCCGGAAATCGTGCCATATTTAGTGGTTGTTTTAGCATTAATTC-----------AGAGATATAAGTATTGATGCTTGCTGCAACAAGACCTGAA chr4 - 94230402 39357092 39357091 39357522 54872881 54872880 54873311 431 TCCAGAGTTTCACCCAACATGCAATATTTGACAAATGCTGCTAAGTGCTAGGT---------AAATATTAAAGTGCTTGACAAGTAGTTTTTT------TAAAGTTTCTGTATTTTATATTATTGTGATTTCAAACATATGTCATTATAAGCTTATCAGATTTCTAAAAATGAACTTTCTATAAAAATCACACCGGGCCTCTCAGCTGTGTTTTCCTC--TTATTTATGGACAAATTGAAAACAAATGTTCTCCTTCAAAAACAAAAAAAGCAGGATGAAATGGAAACAGCTGGCAGAATGTGCTTTTCCTCCAGAAGTCATCTGCAATACA-AAGTGAATTGGG-GATTACTTTATTCT---GAAGTACAGTACCATTTAATGGTGATTTCTGTGGCAATTCGAGTGGAATCTGGAGGGAAGAGCATC-AGGCCTGTTGCAATGGGATGTGAA .::.:.:....xxxx....::x...:...x......xxx....:..:x...:.---------...:...:.:x...:..........xxx..:------.x.........x........:..xx:.x....:..........x:....................:..........:.................:.....:..........x....:..--........:.....................:.::.:--------......::.x:.....x..:.........x...:....:.....:...:....x.......:......-.....x.x.:::-x.x:....x.x...---...:.xxx.:xx:.....:....x:...:x.::x:.....-----------:...:x.x:..:..:-.x..:..:.....:::..:x.... 53M9D31M6D119M2D36M8I68M1D12M1D14M3D40M11I15M1D24M 307/412 74.5% 431/94230402 0.0% 42/412 10.2% 84113481 NA +3028 chr4 + 190214555 123472699 123472698 123472757 59 ATGAGTTTCAAAGGATTTCTTTTGTTTTGTGTGATTTTTTGTTGTTGTTGTTGTTGGTT chr4 - 94230402 3345252 3345251 3345310 90885093 90885092 90885151 59 ATTATTTTCAGATGACTATCTTCCTTTTGTGTGGGTTTTTTTTGTTGTTGTTGTTGACT ..x.x.....:.x..:.x::..:x.........:x.....x...............::. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 120127447 70087108 +3257 chr4 + 190214555 123472707 123472706 123472803 97 CAAAGGATTTCTTTTGTTTTGTGTGATTTTTTGTTGTTGTTGTTGTTGGTTGTTTTTTTTGAGACACTGTTTGGCTCTTGTCGCCCAGGCTGAAGTG chr4 - 94230402 3452090 3452089 3452183 90778220 90778219 90778313 94 CAAAAAGCTTTTCTCATTTTGTGCTGTTTTTTGTTGTTGTTGTCGTTGTTCTTTTTTAATTAATTGCTATTT---TCCTGTGGCAGGAGGGGAAATG ....::::..:.:.::.......:x:.................:....x.:x.....xx.x.:x::..:...---..:...x..xx::.xx...:.. 72M3D22M 62/94 66.0% 94/94230402 0.0% 3/94 3.2% 120020617 70193938 +3201 chr4 + 190214555 123480518 123480517 123480589 72 CTGCAACCTCTGCCTCCCAGGTTTAAGTGATTCTCTTGCCTCAGTCTTTGAAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::....:.....x...x.xx.x.....:....x..........:.:....x.:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 105283392 84931163 +3030 chr4 + 190214555 123483928 123483927 123483979 52 ATATATTTGTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACT chr4 - 94230402 84182665 84182664 84182716 10047687 10047686 10047738 52 ATATATTTTTTACCTTTTCTTCTTTTTTTTTTTTTTAAGTTTCAGTCACATT ........x..x:........:..............:..x.xx....x..:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 39301263 NA +3035 chr4 + 190214555 123489841 123489840 123489893 53 ATTGAGGTGATGATTTTTCTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTGAGA chr4 - 94230402 34744731 34744730 34744783 59485620 59485619 59485672 53 ATTGAAGTGATGGTTTTTCTGTTTTTGTTTGTTCTGGTTTCTTTTTCTTCAGA .....:......:.......x.....x:..x....xx...:.....:..x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 88745110 NA +3150 chr4 + 190214555 123498315 123498314 123498366 52 TTTTGAATATATATACATCTTTTGTATATATATATCTATATATCTTTTAGAT chr4 - 94230402 19659967 19659966 19660018 74570385 74570384 74570436 52 TTTTATGTATATATATATCTTTCACATATATCTATTTATATATCTTTCATAT ....:x:........:......:::......x...:...........:.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 103838348 86376207 +3284 chr4 + 190214555 123526009 123526008 123526072 64 GTGCAAGACACCATCTCAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGGCTTAAAAAA chr4 - 94230402 25738855 25738854 25738918 68491485 68491484 68491548 64 GTCCAAGACACTCCCTGTTAAGGAGAGTAAAAAAAAAAAAAAGAGAGAAAAAAGACTTAGAAAA ..x........:x:..xxx..::.:.:x.......:........:.:.......:....:.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 97787154 92427401 +3131 chr4 + 190214555 123540287 123540286 123540334 48 AAGAAAAGAGAAAACTTTTTATTATCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 22823918 22823917 22823965 71406438 71406437 71406485 48 AAGCAAGTAAAAAGCTTTTCATTATTTCTTTTTTTTTTTCTTTTTCTT ...x..:x.:...:.....:.....:.............:.....:.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 100716369 89498186 +3419 chr4 + 190214555 123540287 123540286 123540342 56 AAGAAAAGAGAAAACTTTTTATTATCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 22826418 22826417 22826473 71403930 71403929 71403985 56 AAGCAAGTAAAAAGCTTTTCATTATTTCTTCTTTTTTTTTTTCTTTTTCTTGGAAA ...x..:x.:...:.....:.....:....:...........:.....:..x..:. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 100713869 89500686 +22148 chr4 + 190214555 123545963 123545962 123546568 606 TGTTGAGCAGTGATTTGTACCAGGTAATGTGAACTAAGTTGCCCTCAGTCTCTTTACAGATTAC---ACCCCATTTCCTTTACTGTGCTGCTAAGTAATTCTTAGGGAATTATTCCCCCTCCAACTTCTCTCTGCTAACAAAATGATCTGCCACATATGCTTCCACTTTATGTGCTGCAGGACAGCCATGGGCTTCATAAAGC---TGCCTGCATTTCAAACTGTTCAGG----CTGGAACTGTAATCTTTCCACCCACCCCTTTCCCGTCAGGTAAAGAAAATGTTCATACCTCA-GGTTTTGTTACCAAGCAACAGAGTTCCATTTGCCAATTGCC-ACCATTTCCTTCTCATAGTATTACAGGCCTTATTAATTAACATTTAGTTCAGAGAAATTGCTGTCATTATGTGAAGTAACTTCCTTTAGAGGTTATTCATTAACCTTAGGTATTTTACTGTGTAATTATAATTGCCAAGTGCCGCGGGCTTGGAAAACGTTTGAACTCCTGAAGGTATCAGGGGACGGCAGAAAAGATATTATCTGATTTTTCTTCCATTTCCAGTTAAGGATTAATCTTGAAGATCCCCTATTTCCCCTGCAGAGTTATCTGCCTTCC chr4 - 94230402 39368255 39368254 39368809 54861594 54861593 54862148 555 TGCTGCTTGATGTCTTGCATACAGTAATGTGAACTTCATTGCCCT-GCTTTTACTGCTGATTATGCAACAGCATTTCCTTTACTTTGCCATTAGCTAATTCT---------------CCCTCAGC--CTGCCTGTTAACAAAATTATTTGCTGCACCTGCTTCCATTTTCCATGTCAT-GGACAGTTGCTGTTTTTACAAAATGTTTTTTTGTTTGTCAGGCTACTCTGCTTGCCTGGAAGTGT--TTTGCTTGCTCAAATTTTTC----------------AGGCTCATACCTCAAGGACTTGTTACTAGGTAACAGAGTTCCATTTGCCAATTGCCCACTATTTCCTTCTCACCGTATTACAGGCCTGATTA-TTAACATTTAGTTCAGAGAAATTGCTGTCATTATGTGAAGTAACTTCCTTTAGAGGTTACTCATTAACCTTAGGTATTTTACTGTGCGATTATAATTGCTAAATGCCATAGGCATGGAAAACCTTTGAACTCCTCAAGGTATTAGTGTGTGAGAGAAAGGGTATCAGCTG---------TGATTTCCACTT----------------GTTCCCCTACTCTTTCTCCACAGTTATTTTTCCTTC ..:..xx:::..x:...:.:xx:............xx:.......-:x.:.:x:.:.x.....:---..xx.............x...:::..:x.......---------------..::..:.--..x:...:.........x..:...::..:x........:...x::..::::-......::::x.x:..:.:...::---.x::..:x.x...::..::..x.x----......x...--.:.x::::.:..xx::....----------------.x.:..........-..x:.......:.:.:.........................-..:............:x.............x....-...........................................................:..........................::...........:..:....:::...x........x...........x.......:..x.x::.:x.....:.:...:.x...---------:x.......x..----------------.x.......:.::::..x..x......:.x:.:.:. 45M1D18M3I35M15D8M2D51M1D24M3I24M4I10M2D20M16D14M1I41M1I35M1D170M9D12M16D36M 406/543 74.8% 555/94230402 0.0% 75/543 13.8% 84177708 NA +39540 chr4 + 190214555 123554843 123554842 123556057 1215 CTTTCTTCTCCTGCCCCCTCCTCTTCCCAGGTTGACGATGGATCCCCCAAGGCACTTGTTGCTTCCTCCAAAGGAGCTCCCCATTACAGCTGGAAGAGAGGCTTGTTTCTCCAGCTGTCTAACCTTTAGTTTTATCTGCCTCTTGTTGACCTCTTAGTTTTATAATGAGTCAGTTTATTTGCTTGTACAAATTGAGTTTTCTTAG----AAATATAACAG-TTAGAAAGAGGCCAATGTTTTGTT---TCCCCTTATGAAGGAGAAGTAGCTATGGGACCG--------------GGCACGGCTGAGGCTGTTCATTCCATGCCAGTCCCTGTTGTTGG------------------------TTTATTTTAGTACCACGTAGT-GAAGCCTTGTGGGCAGAGAAATATTGTCTCCCTTGTCGGAGGTAGAAATATCTGCAGGGTTTACAAGCTAATTACTTCTCGATTCCCTGGGAGTTCTAAGAATTTGCTTAGCAACTGGCCTGACCAGTCTCCCCCAGCTGCCCCCCAACATGACTACACTTACTGGTGGCGCTGATGGAGCAG------------TTTTCGAACTAAACAAGGATTAAGCATTTTGTGAAAATGGTGCCAGTCTTTTCCTCGATGGGACCTGAGCCTGTAACCTAGTCCAACAAAACGAGGGAGAACAAGCCAAAAAAAACCTTTTTAAGAAACAACACAGGCAGTAGGAAATCATACTGGTCAGGGCTTGTTTTCCTGGCGTGGGGCCTCATTCCAACCTGTTGCAATCAGCTCTAGAGTGTCTATAGGGACACCCTGGTGCAGG-GGCCCCGCGGAGGAAAGGAACTTTTACATTTCTGTTTGACTGGGCTGCTTGCCAGGGACTAAGTTCAAAGTGCAGTTTCCAGTAATTTGCTGAGACTTCTCTGTGGGTTTGATAGGCCAGGACAGAAGCCTGCAAGCCGAAGTAATATTTCCTGATTTCTGTCATTCCTTAAGAAGAGAAGGAAGGTTGTTGAGGGACTAGGGATTGGA--GAATTTGTTGGCTCTGAGAGCAGATCGGACCCCCACTTCCCCCTGTCAACCCC----AGCCCCTT---CTCCTCAATCCCGTC---TAGG-----------GCCATTGGCAGCCTGGCA-CTAGATGG-AATCACACGGGCTCCCTCTCAGAGCAAACG-TGAGGTATGCATTCCATG-AGCCAGCGAAAGCCTGCATTGATTTACTGCATGCTAGCATTATTTGGAGCTATAAAGTTGTCGAGTAATGGCAATATGTTCTTGTTTTCT chr4 - 94230402 39372048 39372047 39373331 54857072 54857071 54858355 1284 CTCTCTTCTCCTTGCTCTCTGTTGCCTGATGTGGAAGGTGTAGATCTATGGGGATTTACCATTTCCTCCTAGGATCACCTGTGCTGTGGCTTAAATAAAAGTTTGTTTCTTCAGCTGTCTAACTTTTGAGTTTATCTGACTTGGTCTGACCCCTTAGTTTTATAGTGAGCTAGTTTATTTGCTTGTGCAAATTGGGTTTTTGTAGGCAGAAATGTATCAGGCTGCAAAGAGGCCAATCTTTTGATCACTTCACCTCCGGAAAAGGGCAATCTACAGTGCCTTTCTGCACTCAGTTGGCACTCTCTGGGATGTTAGTAACAT-CAAGCTACTGTTTCTGAGCACTTCATTGCACACTTTTTTTTTTTTCTTTAAAATAGTGTTGTAGAAATCTGGTCTTGGGAAAAATGTTGTTTCTTCTCTCTATGCTAAAAATATTGATAGGGTTTAGAAGCCAATTGCCTTTGTATTCATAGAAAATCCAGAGTCTTTGCTTAGCAACTAGTTT-CTAATTCTTCTTTAAATACACCTTTATGT---TATACCTA-TCGTCGTGCACACGGGAAAGCGTGAGGCAGAATCCTGGAAGAAAAGGAGAAGTAAACAGTTTGTGAAAATGGTGCCAGT-TTTTCCTCGATGGGGCTCAAACCTCTAATATAGCCCAACAAAGCTGGGAACGATGTGCCAAAATA--TCTTTTTAATAAACAACACAGGCTGTAGGAAATAATACTGGTCAGGGCTTGTTTTTCTGGCTCAGGGCCTCATTCCAACCTGTTGCAACCAGCTATTGAACGTCTGTGGGGACACCCCCATACAAGAGGCCCCATGGAGGAAAGGAACTTTTACATTTCTGTTTGACTGGGATCCTTGCCAGTGGCTAAGTTCAAAGTGCAGTTTCCAGTAATTTGCTGTTACTACTCCGCGTGTTTGATAGGCCAGGACAGAAGCATGCAACCTGAAGTAATATTTCCTGATTTCTGACATTTCTCAAGATATGAATAGAGGCTGCTGAGGCACTGAAACTTGGAAGGGTTTTCCTGACTCC---AGCACCTCTGA----CACTTTCCCTTTTTCTTCTCGGATAGCCCCTTTCCCTCCCCCATCTCCTCCCTCAGATCATAACCCTTGCTGTTGTCAGTTCTGTATTTGGATGATATTCATATCGATTATTTCCCTGTGCAAACACTGTGTGGTGGTTCTTATGCAACCAGAAAAATCCTAC--TGACTTACTGAGTCTGGTGGCTATTTAGAATAATATTCTTCTTTAGTAGTGATAACTCTTTCATTTCTCCt ..:.........xx.:.:::x.:x:.:x.x..x..x.:..x.xx:.:xx:..x.:..:::::.......x.:.:xxx:.:x:::.:::...x:..x.:.:.:........:............:...::x........x..:xxx:.....:............:....::...............:.......:.....:x...----....:..x...-:.:x............x.....x.---.:.x.:.x:.:.::..::xx.x...::.x:..x--------------.....xx::x:..x....x:.xx...-.x..::x.....x:..:------------------------...x:....:x.:x::..x..-...::..x..xxxx:..:....:....:..:::.x..x:x.x..:......:x::........x....:....:.:.:.xx....x:x.::.:.:.x:..xx..............:.::.-x:x.x...:.:::.:x.:.x..::x.::.---..:..:..-.x..x.:..xx.:..::x..------------.::.x...xx...x:..:.x...:..x....................-..............:.:::.:...x...:x...:........:.x:..:.x:.::x.......x.--:........x.............x.........x.....................:.....x::........................:.....x.x..::....:.:.........:x:.:..:.-......::....................................x.x........x.:..................................xx...x...:.:.x.......................x.....x.:.......................x....:..:....x:x...x::...:..:.....x...::::x.....--.:x...x:..:...:---....xx..x..----.....:...:.x.:xx:.:.----........---....:.x...:.x..---:..:-----------..::...x...:::x.:.-:.:....:-.x...:.:x.::.x::..:.x.x......:-..x.xx:..xx.:::...-.:....x:...x...:.--...:......x:.x:x:xx::.....:..::x...xxx..x.:x....:..::..:x:x...x.x.:.:.. 205M4I11M1I24M3I33M14I26M1D17M24I21M1I121M1D29M3D8M1D20M12I47M1D65M2D126M1I209M2I15M3D11M4D20M4I8M3I15M3I4M11I18M1I8M1I30M1I18M1I17M2D71M 825/1197 68.9% 1284/94230402 0.0% 105/1197 8.8% 84182795 NA +7389 chr4 + 190214555 123585233 123585232 123585417 185 TTGACAATGAAACACTTTATTATGGAACTGAAGATCCTCTTAGGAATGTTAGGTTCACAGTCTACATAGTAAAGAACCTTCTTTGAATGTCCACACACAAAGGCTGACTGCATAATCCTTTAATATGCTTTTCACAGACTTAATTCAATGGGAG-TCAGGAGGAGGCTTTCGGTA-CTGAACAGTTT chr4 - 94230402 39380758 39380757 39380940 54849463 54849462 54849645 183 TTGACAGTGAA-CACTTTATTATGGGGCAAAAGATCCTCTTAAGAATGTAAGGTCAGCAGTC---AGAGTGAAGAATTTCTTACGCACATCAACACTCAAATGTTTGATGCCTAATCCTTTAATATGATTTTTATGGATTGATTTCAACAGGAATTCAAGGACAAATCTTCAGTAGCTGAACTGCCT ......:....-.............::.x:............:......x....:x:.....---.x...:.....::.::.x:.x.::..x....x....x.:.x:x...x...............x....:.::..:.x.x.....::...:-...:.::x.::::...:...-......x.::. 11M1D50M3D89M1I20M1I11M 130/181 71.8% 183/94230402 0.0% 6/181 3.3% 84204475 NA +23516 chr4 + 190214555 123588157 123588156 123589089 933 AAACCAGTTAAAATTTGTTTATCCAAAGGAGAAGAA--ATACAAACAATACTGGACACATGCAAGATGTGTTTTTTCTTAGCGGCAGCTGCTAAC----CATCC--TGGCTTCCTGGCAGGGAGCAGGTTATCATCTATCCTGT-GACTACGAGGGCACACCCTGCGTTAGCCCTGAGGCAAAGAGATAATAATAGCATGCTAGACTGGCAGCCTACACTCTGGAAGGGTTTATGAGGAGGAAGTCCGCAATTACATATTTCTGGGCAAACATTAACCAAGATTGAAACCCAGATTTGAAGAAAAATAGCAGGCTGGAATCTTCAGACAGATTCTGTAGCTGTTCTGTGGATTG-AAACAGTAGTCAGACACGCTGCTAACTCCAAAAGGTAAGGTAAAAGATTGAGATGGCAGTATATAAAACTTGGTA---------AGAAAA-----CTTTTCCACACCTGCCCACAGAATGTGTTCTGTAACACACAGAGCATTGTCCACATATGAATGATGAGAAATTATTTACATTCATGACAACAGAACCGAAGCCACAACATAGGGTCTATTGTTCAC----CTCATAGGGGTGACCGAATCTATTTATCCATGTGGTTTGGGAGCTCACCACTGTGCATTGAAGGGCCTCCTGTTGGCAACA--TCACCAAGAGCA--TTTCAGTCACT---GTTACTACAATCTGAACAATTTGGGTTCCACGCTGTGGTTTTGTAA-----------------TTTCTATTTTTAAAACTTGAACCATGGTGTGTCC-----AGTCTTGGTTGGGCATACTT-AAAATGAAACTGTTAAGCTAAAATTAGCTTGACATCAAGACGTTGCATGTTCATTTTCCT---TATATTTATAGCTGACCACAGTCATTATACAGAAGCCATCTAGTCTTTACTGTGCACTCTAGGGAACAGGAGGGGCAGTGGGAGTA-----ACCAAAAAAAGAACTACAAGTTTTTCCAAAG chr4 - 94230402 39383408 39383407 39384363 54846040 54846039 54846995 956 AAACTAATTCTACTCTGTA-AGCTAGAGGCAGAAAATTATACTGACAAAACT-------TTCAGGTAATCTGCTTTAATAGCGGCTGCAGCAATCGGGGCATCCACCACCTTTCCTGCAAGGAAAGGGTTATC---TATCCTCTCAAATGTGAGAGCACACCCTACTCTAGCCTGCAGGCACAGAGATAATAATAGCATGGAAGGATGGCAGCCTGCGCTCTGGAACGGTTTATGAGGAGGAAGTCCGCAATTACATATTTCTGGGCAAACATTAACCAAGACTGAAGCCTAGCTTCGAAGAAAAACAACAGACTGGAACCTCCAG-----TAATGTAGCTGCTATGTGGACTGAAAACTGCAGTCAAACAGTCATGTAGCATTAGAAGCAAAGTAAGAATAGCTCGATAATATTA-GCATATCCTGGTGTGTGCTTGCAGAAAGAATCTCTTTCCTGACCCTGCCCTCCAGTGATAT--TGGAAAGAACAAGATTTTTTTTTTTTTTAAGT--------ACCGCCTAGCTTTGTGAAAACAG-ACTTAAGCCAAAGTAATGAAACTATTGTTTGCTGTGCTCA------CGGCCTAATCCATTTATATCTGTGGTTTCAGAGCTTACCACCACGCACTGAAGTTTCTCCTCTAAAAAACAAGTTACTTTGGGCATCTCTCAACCACTGCGGTTACCACGCTAGAAACAATTGCTATTCTGTGCTGTGGTTTTGTAAAGTAAGTCTTATTTAGGGCTCTGTGTACTAAACTTG------GATGTGCCCACTGTAGTATAGACTCTGTGTACCTAAAAATGGAATTGTTACACTAAAATTAAGTAGGCAGCCAAATGATACATGCTTCCTCTCCTTTGTTTTTTTCTGACAGACCACAATTACAGCAAAGAAGCTGTCCACTCATTATTGCAAACTCTGAGGAATAGGATG---AGTGACAGTATGCAGACCAATATAAGAGAGGAACGTTAGTCTAAAG ....:.:..xx.x.:...x-.x.:.:...x::.:..--....x:....x...-------.x..:.xx:.x.x:...xx.......x..x..x.x.----.....--::x...:.:x...:...:x:.......---......x.-:.x.::...:.........:.x:.....:xx.....x..................xx..:x.........:.:........x.......................................................:....:..:..x..:.........:.:...:......:..:...-----.xx........:.x......:..-....x.:.....:...xx.xxx..:.x::.:...xx...xx.:..x.x:xx...:::.x..-::.x.x.:....:---------.....:-----....:.::xx.......x.x::xx:.:.--..x..x:x...::::x..x.::x:x.x.:.:.--------.:::::..xx..::...x.....-..:x......x.::.xx.::x........::.----....------:.:..x....:......x:x........x:.....:.....:::...:.....xx:.....x.x::x....--.:..:xx.:...--.:...::....---.....:..:x.xx:.......xxx:...:::...............-----------------x:...:.x.x:x.......------.:....:..-----...x.x.::.xx.::...:.-......:..:.....x:.........:x.x.:..x.x.:.:.x.:....:.:x:.:....---.x.x...x.::.x.......:.:.:x::.x......::..:.x..x...:..::x.....::....:....x.---....:x....-----.....x.x....:xx:x.x...xx..:.... 19M1D16M2I14M7D36M4I5M2I27M3D8M1I181M5D23M1I61M1D13M9I6M5I28M2D32M8D23M1D32M4I4M6D71M2I12M2I11M3I46M17I19M6D9M5I20M1I60M3I73M3D10M5I31M 608/890 68.3% 956/94230402 0.0% 109/890 12.2% 84204749 NA +14267 chr4 + 190214555 123594253 123594252 123594625 373 TGGAACTAATTATCTGCAAATATTCCTTGACT--CCCTCACTT-CCCATCTGAGATTAATTATTAAAAAAG-AGTCCCTGATGGATTCCTGCCTTCAGGTATAATTACGTCAAAATTGACTGACATTTAAAGCACATATGACACTTTTTAGATTTAATTAGAGTAAATTTGTGAAATTTACTTGACTGGTAGTTTTGGGGATGGTTGGAGGCATGAAAGTATACTTAACATTATAATTTCCTGCTAATGCTAAGATTTAGCCCCTATTGGAAGGTTCTATATTCAGAATAAAATCACTTAAGAAATGAAGCCCCAGTGACTGTTTTGGTCATGAAA--TAATGAGCCCA-GTCACTGAGAGATGCCCTGAGAAAAAAAAA chr4 - 94230402 39387156 39387155 39387531 54842872 54842871 54843247 376 TGGATTTAATCATTAGCAAATGTCACTTGACTGTTTCTCAGTTGCCCATCTGACTTTAATTCCAAGAGAAGGAAACCCTGATGTATTCCTGCCTTCAGGTATAATTACTTCAAGACAGATTGACCGTTTAAGCACACACGACACTGCTTAGCTTTAATTAGAGTAAATTGGCAGAATTTATATGACCGGTAGTTTTGGGGACTGTCAGATGCATGAAAGTATATTTTGCA-TATCATTTCCTGCTGTGGCTAAAACCAAGGTACTAGCTGAAAGGCTTGTAATTAGGATAAAAACACTTTGTAAATTTAACCCTAT---CTCCATTAGGAGTGGAAGGTAACTGGCTGAGGGGGAAGAGTGGTGCTCTGGGAAGAGAAAA ....x:....:..:x......:.:x.......--::....x..-.........xx......x:x.:.:...-.:x........x........................x....:.:x..:....xx..x.......:.:......x:....x.................x.:::......:x....:..............:x..::..x.............:..x:..-...x..........:xx.....:.::x..x:x...x:x...:.x::.:..x.:..:......x.....x:x....xx.:...:.x---..x:x..:.xx:..:..--...:x:..:x.-.xx:xx...x.:...:...:...:.:.... 32M2I9M1I27M1I158M1D85M3D17M2I11M1I30M 265/369 71.8% 376/94230402 0.0% 11/369 3.0% 84207097 NA +15255 chr4 + 190214555 123599945 123599944 123600357 413 GAGTTGTATTCTTTGTGGTGTATTTCTTGAAAAGATCCATTG--GCTAATCTGGCTAATTCAGGACACTTCCTCTTCCTCTCCTCTTTCTGTGGCTCTCTCTTCTGTTCTCAGGGCAGCCACCATTAGCATGTGTCTACTGAAGGAACAAGTGTGGTGGGGAACAG---GGTGTTGGGTCTCTGGGAAACTTATTTGCATACTTCTTGTTACAAAAGCCAACCACATCCTGGTTAAGACAATGTGCTGTCTGATAAACAGACTGCATCCCCCAGTGTCTGCCTGGAGCTCAGCCAGCGTGTGGCCCGCCTTTGTCACAAGGTGCTG-TTTATTCTGCCTGGAAGTCCAAGGACAGAACAAACCAGCTAAATGAACCTTTTATTTCTCCCATTCTCTGACAGAAATTCCTTGAGTCAAAA chr4 - 94230402 39389141 39389140 39389547 54840856 54840855 54841262 407 GAATTCTCCTCTTCAGGGAGTCTTTCCTCAGGAGAGCCGTTATCGTTAATCTGGTTAAATCTGGATGTTTTCCCTTCTTTTCTTATAT-------TGTTTGTTCTGCTTTGAGG-TAGTTACAGTTCATTTATGTCTAGTGAAGGAACAAGTGGTATTTGCCACAGTCGGCTGCAAGGGCTCATGGGCTTCCATTTGCATAGGCCTTGTTACAAAGGCAGACCACATCCTGGCGAGGACAAAGTGCTGTCTGATACACAGCCTGCATACACCAGTGCCTCCCTGGAGGGCAGCCAGGATGTGGGCAGGCTTTGTAAGAAAGCACTGTTTTAGTCTGTGTGGAAGTTGAGGGAAGGGATAAACCAACTAAATTAATCTTTCTTT----CCATTCTCTGGCAGAGCTTCCACCGGTCAAAA ..:..x.x:....::x..x..x....:.x.::...x..:..:--.:........:...x..x...:::..:.:....:.:..:.x.x.-------.x.:.x.....:.:.x...-:..::..x:..x::x.:......x..............xx:.xx.xx....---.x..:x:..x...xx..:xx:::.........xx:...........:..x:............:x.:.....x.............x....x......x.x......:..x.......xx.......x:.....x.x.x......x.x..:.::...-....x....:x.......:x.:...x:.:.:......:......x..:....:x..----..........:....:x....x:x:....... 42M2I44M7D19M1D51M3I157M1I56M4D32M 284/401 70.8% 407/94230402 0.0% 18/401 4.5% 84210804 NA +3175 chr4 + 190214555 123600570 123600569 123600640 71 ACATCTGTTTTCTATGTGTTTCCTTTCTCTTTTCCTCCCTCCCACCCCAGAAAACACAGACAAAAGGAAGT chr4 - 94230402 34590684 34590683 34590751 59639652 59639651 59639719 68 ACATTTATTTACT---TATTTCCTGCCTCTTCCCCTCCCTCCCACCCCAGGCTTTACAAAAAGAAGGGAAT ....:.:...x..---.:......x:.....::.................:xxx:...:.x.:....:.:. 13M3D55M 50/68 73.5% 68/94230402 0.0% 3/68 4.4% 89009886 NA +35600 chr4 + 190214555 123616941 123616940 123617559 619 AAAGCAGGGGGAGCTTTGCAAGGCTACTGATGCCTGAGTAGAATCACTAACTGGTTCCCTCGCTCTGTGCTAGGCCGTCTGTATTCACTGTATCACAAGCTTGAAACCAGACCTCATTTGACGGAGCCAAAAAATGGTCCTTTTGTTGCTGTTTTTTTTTCCCTAGTGTCATCTCTCATGGTTGCCTGGGCAACCAGTGTGTATCCTTTCAGCATAGGTTACTGGGCCCCAGGAAGGAAGTGCTCCAGCGCTGGCCTGCTATTTTTATAGAACCGTTACATAATACAATCTATTAAAGCTTCCTCTTGGTGTTTTATTGCACAAAGGGGAAATTAAGTTTGATGACTCCTAAATGTTGGATGGAGGATGTCAGGTGACTCTAGGATTGTTTGGCTCAGGTCACATAGCAACAGTATTCCCATATGCAATTCCAGAAGAACCCATATACAATCATGCCCTTGGCAATGTTCGCCTGCCTGGGGATCATTAGAGGAAACTGAGCTCTCTGCTGCTCAGGGGTGTAAGTTTTGTCCGACTACACAATGCTCCCTC-TCTGG------TAGGATGGCAGCAGACAATGAAACACTATTC--ACAGTTAAGGGCAAAGAGAATTTTAAAGGTG chr4 - 94230402 39399704 39399703 39400311 54830092 54830091 54830699 608 AAAGCATTAACAGCCTTGCAAGGTCACTGGGACCTGAGCAGAATTACTAACCGGTTCTCTCTCT----GTCAGGCACTCTGTATTCACTGTATCACAAGCTTGAAGCCAGACCTTATTTCACTGAGC-AAAAAATGGTCCTTTTGTTGCCGCTTTTC---CCCCAGTGTCATCTCTCAGGGTTGCCAAGGAAACCGGTGTGTATCCTTTCAGCATAGGTTATTGGGCCCCAGGAAGGAAGTGCTCCAGTGCTGGCCTGCTATTTTTATAGAACCGTTACATAATACAATCTATTAAAGCTTCCTCTTGGTGTTTTATTGCACAAAGGGGAAATTAAGTTTGATGACTCCTAAATGTTTGATGGAGGATGTCAGGTGACTTCTGGATTGTTTTGTGCTTGCCACATAGCAACAATATTTCTGTATGCAATTCAAGAAGAACAAATATACATTAGTGCCATTGGCAATATTTGCCTGCATGCAGATCGCCAGAGGAAATTGAATTCTAAGCAGAGC--GAGTGCAAACACTGT--AAATGTGCAGTGCGCTCTCAGCTGGGGAGGATAAGATGGCAG------AGCAATTGTTGTTTCAACAGTATAGGG--AAGAGAGGTTTGGAGGTG ......xx::x...:........::....:x:......:.....:......:.....:...x..----.::....xx............................:........:....x..x....-.....................:.:....:---...:..............x.......x:..x....:.........................:..........................:............................................................................................................x.....................::x.........x.:x.xx.:............:....:.::..........x........xx.......x.x:....x........:..:......x..x:....:::........:...::...xx..x.xx.--.:...:..::x:...--:.x.:::..:...x.:...-x....------..:........------.xx..x:::.:..:--.....xx....--......:x...::..... 64M4D59M1D29M3D354M2D15M2D19M1I5M6I11M6D14M2I11M2D18M 497/599 83.0% 608/94230402 0.0% 29/599 4.8% 84217237 NA +12805 chr4 + 190214555 123621200 123621199 123621607 408 TGGAGCTGGAATGAGGTACGTGACTCTGTTCTATTCCTGTCAA-------------CAGGAAGGATGGAGAACATTTTTTTTTTTCTCCCTTTGGCAAGCTTGCCTCCCAGCTTCCTATGGT-TGGAAATGGGCAATAAATGGCAGGGTATCCAGTGATCTCTTTCTAGGCCTCCTGGTTACTAGCATTGGCAAGGACACTACTCTCCTT----TTCTTTCTTATTTTTAGAGTGTTCTCTTTTTTTCCTTTATTTCCTTTTCAGGCTTGTGGGGAAAGCAAGGGCCTGTCATTATCAGGGAGTGAGGTGAACCACAGGGGCTGGTTTCCCAAGAATCCGGACCCAGCTGCCAACCTAGTGG--GTCAGAGTCATCATCTTTATTACTGAGGGCGGTTTTCCTGTGAAAGTGAGACTTCCTTTCATTT chr4 - 94230402 39403146 39403145 39403537 54826866 54826865 54827257 392 TAGAGCTGGAAT----TATCTGACTTTGT------CCTGTCAAATGTTAAGCCAAACAGGAAGGTTTATTTTTCTCCTTTCTTTTTTTCTTTTGGCAACTACTTCCCCAAGCTTCCTATGGGGTGGAAATGGGCAATAAATAGCAGGGTATCTAATGGCATAATTCCAGGCCTCCCAGCTACTGGTGTTGGCAAGGAAATGGCTGTCCTTTTGCTTCCTTCTTATTTTTAG--------------------TGTTGAGTTTTCAGG-----GGGTGGAGGGAGGGTCTGCTATTATCAGTGAGAGAGTCAAACCACAGTGACTGCCTTCCATAGAGCTCTTGCCACCCTGCCAAACTGGAGGAAGTTGGAGTCAT-ATAATTCACACCACTAGTGGTTTTGCCTTGTAAGTGAGACTTCCTTTAAATT .:..........----..:x.....:...------........-------------........x.x:xxxx:x.::...:....:.:.:........x:x:x:.:..x............x-..................:..........:.:..::x.xx...:........::.:....:.::..........x.:x:..x.....----...:.............--------------------.:..xxx........-----...x::..x:....:...::........x...x...x::........x.:...x:....xx...:::.xx:..xxx.......x..:.x..--..::.......-..xx..xx:..::xx:.:......x.:x..x................x.x.. 12M4D13M6D8M13I66M1I87M4I17M20D15M5D91M2I11M1D52M 269/372 72.3% 392/94230402 0.0% 56/372 15.1% 84218054 NA +3639 chr4 + 190214555 123628745 123628744 123628827 83 CTGCAGTCTTGACCTCCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCTTGAGTAGCTGGAACTACAGGCACACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...:.:x:.x..:.....:.....:.x.:.x.xx:x........:.::................--.:::......::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 105431619 84782936 +3379 chr4 + 190214555 123629156 123629155 123629241 86 AAATCTTGGCTTCACTACTTGCTGGCTGTGTGATCTTAGACAAGTTACTTAACTTCTCTGTGTCTTAGTTTTGCCAGCTTTAATAT chr4 - 94230402 31511934 31511933 31512018 62718385 62718384 62718469 85 AGAGCTAGATTCTGCCACCTGA-GTCTGTGTGACCTGGGACGAATCACTCGGCTTCTCTGTGACTTAGTGTTGCCATCTGTGAAAT .:.x..x.::.:::.:..:..x-.x........:..x:...:.:.:...:::..........x......x......x..x.:.x.. 22M1D63M 58/85 68.2% 85/94230402 0.0% 1/85 1.2% 92117222 NA +16554 chr4 + 190214555 123631830 123631829 123632249 420 CCTTTTTCTCTCTTTATGATTCATTCTGAGAAGGCTT----------AGTGGTTAATCTTCTATTTCCAGTTTTATGCTGTGTTCCTCC------------CCCTCGCCTAGATCTGAAACATCCT-----------TTCCTTCAACAATTCAAATGTC-----TTGGCTATT---------------CATTTTCCCCTTTGGTTCAGAAAGCT---TTAGTTGTCAATTCTATTCCCTTGTCAGCAACAATTTTTATTCTTACTGGCTTAGTCAGGCTGTCTGCCCTGGCTTTCTTTATAAGTGTTTTTGTGTGGAATTTTTGCCTCCTAGGAAGCCCACTGTAGCATAACATAATTAAGTGACAATATATGAGGTGCCAGGACTTTA-CAAGCAGTTAATGACTGGTCAGAAGATTTATAAGCAAGAGGTGAAATCAAAGTG-AACCAAACAC-TCAAGTTCTATATAAATAAAAAA chr4 - 94230402 39409822 39409821 39410299 54820104 54820103 54820581 478 CTCTTGCCTTCCCATGTGACTCATTCCAAACACATCTCACTCGTTCAGGAGGGTAATTTTCTATTTCCACTTTAGTGCACTTCTCCTCCTCTTCTGCCCCCCCTCCTTCCAGATCTAAAATGTCCTGTCAGCTGCTGTTTATCTGATGATTCAAATGTCCGTGCTTGACTTCTTTTTCCTCATCGCTACAGTTCCTCCTTCCGTTCCAAAGGCTGTTTTAGTTGTCATTTCTATTCTCCTGTCAACAGCACTCTTCATCGTTTCTGGCTTGGGCGGTTTGTCTACA-TGGTTTTCTTTAGAGGTGTTTTTGTGCTAAATGAGTGCCTCCTAGGAAGCCCAATGTAGCATAACATAATTAAGTGACAATATATGAGGTGCCAGTCCTTAACCAAGCAGTTAATGACTGGCTGGAAGATTTACAGGCATGAGGTAGAGTCAGAGGGAAATTTAACACACCAGATTGTAGTTAAATGACAGA .::..x:..::.:x.:...:......::.:x.x:::.----------:.x..x....:...........x...x:...xx.x:......------------..::.x:.:......:...::....-----------..:x.:::.::...........-----...:..x:.---------------..x..:.:....:x....x:..:...---..........x........:.:.....:..:..x.:..:..:x..x.......:.x.:.x:.....:.x-...:........x.:...........:x:...xxx..................x.........................................xx...x.-..................:::.........:.:...x.....::.:...:..x.-..::x.....-:..::..x..xx.....:.x.:. 37M10I42M12I25M11I22M5I9M15I26M3I69M1D102M1I54M1I10M1I23M 310/419 74.0% 478/94230402 0.0% 60/419 14.3% 84222008 NA +13698 chr4 + 190214555 123649834 123649833 123650247 414 GATGCAAAGTCCCCGGCTTGGC-TTGTCAGAACTTGATAGCTCTGTAAACACTGAAATCCTTGTTGCCATAACACCAGGAAAAATAATATGGGCTCCTGCATATAAATATAACGA-AGGCCTTGGGGAATGGGAGCATTTCTAAATGACTTGAAGCTCTGTCACGGCATAATCTCTTATAAATAAATGTCAGTGTAGTCACTGAATGCAGACTGGATTTTTGCCTGACTACGGTGCTCAGC-CTTCTAGACAATAGTTATGCTAAGGGATTATCTTTTAACATTGTGCAGTTATCTCCTTTGTTTG-TTTTCTTTTTTCATTATTCACATAAGCCAAGGGAAATGAAAAGCATCTTATTTCAGGCAAAAAGGCCTGTGAATGATTAACTCTGGTTCCATGCGTTGGGACTTTGCATAG chr4 - 94230402 39419973 39419972 39420371 54810032 54810031 54810430 399 GAGGTAGAGTCTGCTGCCTGGCCTTTTCAGAACTTGATAGCTCTCTAAATAATGCATCCGTTGTTGC---------AGGAGAAATAGTATGGG-----GCACAGTATTGTGTCCAGAGGCCTTAGGAAATAGGAATTTTTCTAAATGACTTTAACCTCTATCAGAGCATA-TTTCTTATATATAAAAAGGAACATAATTACTGAATATTCTCTGCATTCTTGCCT-ACAGTGGCACTCAACACTGTTAGACAATTATTATA-TGAAGTATTATCTTTTAACAGAGTACAGT-ACCTACTCTGTTTGCTTTTCCTATTTTGTTCTTCAAGTAAGCCAAGGGAAATGAAAAGAATGTTA-ATCAGTCATGGGTGTTTTTACAGAATTAGCTTTAGCTTCATTTAAAAGGTCTTTATGTAG ..x.:.:....:x.x..:....-..x..................x....:.x..x.x:.x.......---------....:.....:......-----...:.xx.x.:.:x.x.-.......:..:...:...::x..............x..x....:...x:.....-.:.......x.....x:xx.:::..:.:.......::xxx...x...:......-..x::..::....:.-..x:........x:....:-.:.:.x..............xx..:....-.:..x..:......-.....:.x...::..x....x:.....................x..x...-x....x..x:::x.::.x.:x.x:....:..:.:.:.:...x::xx:..x....:::... 22M1I44M9D17M5D17M1I54M1D54M1D15M1I19M1D29M1D14M1I50M1D60M 283/395 71.6% 399/94230402 0.0% 23/395 5.8% 84229861 NA +3069 chr4 + 190214555 123652940 123652939 123653000 61 AAGTGCAATTAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 90371269 90371268 90371329 3859074 3859073 3859134 61 AACTGCAATGTGATGCTCATCCTTTTTCTTTTTTTTTTTTTTCCCTTCCTTCTTGTTTTAA ..x......xx:.....:x.::.....:..............:::..::..:..x....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 33281671 NA +3011 chr4 + 190214555 123654795 123654794 123654887 93 TGCTATTTCTTAGCAGAGAAGGAAAGGTATTCTTCCCCTCTTGCTGACTGTATACATGACATGAAAGGAAATGGAAAAGAATTGAAAATAAAA chr4 - 94230402 45676716 45676715 45676808 48553595 48553594 48553687 93 TGCTTTTTCTAAGCAAAGAAGAGAGTGGATTCTTTCTCCCACTCAAATTACATTTTTTTCATTAAAAAAAAAAAAAAAGAATCAGACAGAAAA ....x.....x....:.....::.:x.x......:.:.:.x:x.x:.:.::..x:x.xx...x...::...x::........:::.x.x.... 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 77978079 NA +3052 chr4 + 190214555 123669658 123669657 123669699 42 AAAAAAAAAAAAAAGTGTTATCTTCCCTTCCTTTTCTTCTTT chr4 - 94230402 85806391 85806390 85806432 8423971 8423970 8424012 42 AAAAAAAAAAAAAAGTGTTATCTTTTTATCCTTTTTTCCTTT ........................:::x.......:.:.... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 37863267 NA +3819 chr4 + 190214555 123670634 123670633 123670790 157 ACAGTCACACTAAACATACTGCAGTCATACCAATGAGAAGGCAAAATAAATAAATAAATAAATAAACAAAAAATACCCCCCCCCCAA-AAAAAACACCAA--AAAACCAAAAAACAAACAAATGAAAAACAGAGAACAAAAACCAACACAAAAACCCAAG chr4 - 94230402 24484749 24484748 24484895 69745508 69745507 69745654 147 ACAGACATCCTTGGGATATTAAAAACAAACCAA------AGCAAAATAAACAATCAAAGAAATTAACAAAAAAATCCACCCACCCAACCAAAAACCCCAACCCAAACCAACCAACCAAGAA---AAAACCAACAAACTGAAACC----CCCAAACCCCAG ....x..:x..x::x...:.:x.:x..x.....------:..........:..x:...x....x.........xx..x...x.....-x......x....--x.......xx...x..x..---....x..:x:...x:.....----.xx......x.. 33M6D48M1I12M2I19M3D20M4D12M 105/144 72.9% 147/94230402 0.0% 16/144 11.1% 99185885 91028670 +6463 chr4 + 190214555 123672654 123672653 123672865 212 GAGGCATAATTTCATTGTGTTGAAAACAGCATTTGCTTAAACTGGAGAAGAGATAGCTATTTTGCATTCCAC-AAATTGTATTTAATATTA-CATTTAAAAAATGATAACTTT-CAACAGT-------TTGAGATCTCTTTTGAAGCCCAG-ATATAATTTTCA---TTGTGACAAAATAGGATGAAACAGGAAAGTTATTGAAAGATAGCGTTGATTTAAAAAAG chr4 - 94230402 39426785 39426784 39427009 54803394 54803393 54803618 225 GAGGCAAAAATTCAGTACTTTACAAGCA-TGTCTGCCCAAACTGGAGCAGAGGTAGCTATTTTCCATCCTGCCAAAGTTTGTTTGATCTTGGAAGTTATAGAATATTTATTTTATGACTGTGAGAGTGCCAAGAAATTCTTTGAAGCAAAGTGTGTAACCTCTGAGGCTGAGATGGAATAGGATGAAACAGGAAAGCTACTGGAAGATGACATTGTTTTAAAAAAG ......x..x....x.::x..:x..:..-::.:...::.........x....:..........x...:.::.-...x.x.:...:..x..:-x.x...x.:...:x.x.:...-::..x..-------:::...xx.::........xx..-:.:...::.:::---:..x..:::....................:..:..:.....::.:...x.......... 28M1D43M1I18M1I21M1I7M7I23M1I12M3I59M 146/211 69.2% 225/94230402 0.0% 15/211 7.1% 84245869 NA +33632 chr4 + 190214555 123699654 123699653 123700288 635 TGACATAATTTTTTCAGCCTTGTTTGGATTTACAGTTAACCCTAAAAA-CATTAGTAAATGGTACCCACACTTTTAAATCATAAAAAGAAACCTAGATTTGTTTGCAG-TTTTTTAATCTGTTGTTAATAAACTTGAAAGAACACAGCCCTGTCTAATAAACACATCAAACTAATGGGTACCAGAGCAGTTCAGAAGAGTGTTTGTTGTTTGGTGTTTAGGTTTCAGTCAGAATTAATCAACAATGGATGGGGCCTGCTGTATTTATTAGCAACTCAAATCCCTGTGATTTAATGCCAGGT-CCTTTGACTCATTCCAGTGAATGCTGGCAAGTTTACAGCACTAATACATACTTACATCCTCGGGTCTTTAAAAGAAA---GGGAAAAATAGAGCCTAA-AATCAGACCACAGGATTGGCAAGAATTTCCCGAGAGCCATTTTGAATTTAGCCCTATACAGTGAGCCTGTGAATAGGAAGCAATTGATTCAGGAACAGTGGAGCCTTTTTTTGCCTGAAGAAGCCTTCAGCTGTGCAGATGGCTTGCTGGCATAATCCAGTCTGCTTTTGTCTTTTATTTTATATATTAGGCTACTTTCTTCTCACACTTTATATTGCTTTTATTTTCTCTCTGTGCTCTA chr4 - 94230402 39433743 39433742 39434364 54796039 54796038 54796660 622 TGACATAGATTTT--------GTTTTGATTTATATTAAATCCTAAAAAATGTTGGTGTATGATGCCAACACCTTTAAATAATAAAACT---CCTACATTTGATTGAAGATTCTCTAATCTGTTGTTAATAAACTTGAAAGAATACAGTCTTGTCTAATAAACACATCAAGCTAATGGATACCAAAGCAGTTCAGAAGAGTGTTTGTTGTTCGGTGTTTAGATTTCAGTCAAAATTAATCAACAGTGAATGGGGCCTGCAGTATTTATTAGCAACACAAATCCGTGTGATTCAATGCCAGGTCCCTTTGACTCATTCCAGTGTATGCTGGCAGGGGTACAGAACTGATAAATACTTACGTCCTTGTGACTATGAAAGAAAGAGGGGGAAAATACAGCCGAGTAAACAGACCTCGCGATTGGCATGAATTCCTTGAGAGCCATTTTGAATCTCTTTCTATACAGCTAGCTTGTAAATGGGAAGTCATTGATTCAGGAACAGTGGAGGCTTTTCTTTCTTTGTGCAACCTTCAGCTTTGCAGATGGCTGGCT-GCATAAGCCTGCGTGTTTTTGT-TCTCACTTCCCCT-CCAGGATATTCTCTCTTCCCATCTTTAAT---TTTCATTCTCTTT---TGCTTTA .......:x....--------....x......:.x.x..:........-::..:..:x...:.:..x....:.......x......xx---....x.....x...x..-..:.:............................:....:.:...................:.......:.....:..........................:.........:.........:............:..:...........x...............x.......x.......:..........-...................x.........:.xx.....x...:...x........:....:.x.x..x.:.......---...:......x....x.:-..x......x.:x........x.....:.::................:.xx::........:x...:...:...:.....:x.....................x.....:..x.:.x:x.x.:.........x...........x...-......x..x.:x..:......-.:.:.:..:x:x.-::...x..:.:...::..x..::..xx..---...:...:...:.---....:.. 13M8D27M1I39M3D17M1I192M1I77M3I18M1I148M1D22M1D13M1D29M3D13M3D7M 500/615 81.3% 622/94230402 0.0% 27/615 4.4% 84265911 NA +3052 chr4 + 190214555 123712609 123712608 123712728 120 TCAATAGACCATTAGCAAGGTTAACCAAGGAAAGAAGAGAGAAAATCCGAATAACCTCAGTAAGAAACAAAACAGGAAATATTGCAACTGACACCACAGAAATACAAAAGATGATTCCAG chr4 - 94230402 59582124 59582123 59582239 34648164 34648163 34648279 116 TCCATAGCCTATTTA----GTAAACTAGAGAAAGGAGAGAGAGAACATTCACAGCTTCCTCAAAAAAAAAAAAAAGAAAAATTAAAAAGATCAACATATAAAGTGAAAATATAATTTTAG ..x....x.:...x:----..x...:.::.....:.......:..:x:xx.:.:.:..xx:..:...x....x.:....x...:x..xx:x..x..:.x...xxx....x..:...::.. 15M4D101M 73/116 62.9% 116/94230402 0.0% 4/116 3.4% 64130485 NA +3114 chr4 + 190214555 123718191 123718190 123718239 49 CAAAATTGACAAATGGGCTCTAATTAAACTAAAGAGCTTCTGCACAGCA chr4 - 94230402 41449893 41449892 41449941 52780462 52780461 52780510 49 CAAAATTGACAAATAGGCTGGACCTGAACTAAGGAGCCTCTGTGCAGCA ..............:....xx.x:.:......:....:....::..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 82268298 NA +3127 chr4 + 190214555 123743414 123743413 123743473 60 ATTTGTCTGCACACACACACACACACACACACACACCCACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x...:...:::::.....::::.:::.:.:...x.........::............. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 108778589 81435966 +16149 chr4 + 190214555 123750174 123750173 123750485 312 TGCTCTGCAGACACACAATAATCACCCCAGCGGGTCTAGGGATCAAATGACGGCACTGCTGAAGGATTAAGAGCAACTCTATCCTCTTGGCTTGGACTTTGGAATTTTCATTAAAATGACCTTGGGTGTGGTGAGAAAGGAATTCAGACAACAGGGATCAAG-TCTTAAACATGTCACCTGGGAAAACAACCGAAGGGCCCCTTCAGAGAGAGCTTTCTTTCTGGGACTCAGGCAGAGTTGTCACACTTGTTTTCCTAAGT---GTTTCTCACATGGGATTAGCCTCCAGATATGTGAAAAGTGAGGAGTTGAAGG chr4 - 94230402 39448975 39448974 39449282 54781121 54781120 54781428 308 TGCTCTGCAGACACACAATAATAACCCCTGTGGGCCTGGGGATCAAATGACG-TGTTGCTGAAGGATTAGGAGCAATTCTATCCCTCTGGCATGGACTTTGGAATTTTCATTAAAATGACCTTGGGTGTGGTGAGAAAGGAATTTGGGCTGCATGGATGGAGAGCTTAAACATCCTACCT-GGAGGACAACAAAAGGGCCTCTGCAAAGCTGGC---CTCCCTGGGCCCCAAGCAGAGTTGTCATGCTTTTTCCCCTTAGCATAGTTGTTCAT---GGATTAGTTTGGAGATACATGGAGAGTCAGAATTACAAGG ......................x.....x.:...:..:..............-:::.............:......:.......:::....x....................................................::.:.x:..x....x:..-x.........x::....-...::.....x:.......:..x..:..xx:..---..::.....x.:..:............::...x..::...x..:---...x:...:---.......::.xx.....::..:.:...x..:.x.xx.... 52M1D109M1I17M1D33M3D44M3I9M3D40M 240/304 78.9% 308/94230402 0.0% 12/304 3.9% 84301199 NA +3056 chr4 + 190214555 123761583 123761582 123761632 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATA-TATATATGTA chr4 - 94230402 69437739 69437738 69437789 24792614 24792613 24792664 51 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTA .........x........:x...................x-..:...x... 40M1I10M 44/50 88.0% 51/94230402 0.0% 1/50 2.0% 54323844 NA +3002 chr4 + 190214555 123764319 123764318 123764367 49 TGTGTGTATATATACATATATATATATGTATATATACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ......:..:.:..::...:...x.:...:..:.:........:..... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 98371059 91843496 +3401 chr4 + 190214555 123769992 123769991 123770046 55 TCAGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGACTCTTGCTCT chr4 - 94230402 79586941 79586940 79586995 14643408 14643407 14643462 55 TTGGGTTGTTTTTTTTTTTGTTTGTTTGTTTTTCCTTTAAACAGGCTCTTCCCCT .::................x...x...x.....::....:....:.....x.:.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 44183051 NA +3112 chr4 + 190214555 123802823 123802822 123802888 66 CTCTCCACACCATTCTTCTCTCCTCCGTCTTCCTTCCTCTTCTTCCCCCTTTCCCTTTCTCTTCCC chr4 - 94230402 20485618 20485617 20485683 73744720 73744719 73744785 66 CTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCC ..:.....x..xx:.::x:.:..:..x.:....::::.::....:...............:..:.. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 103317205 86897350 +15047 chr4 + 190214555 123812054 123812053 123812535 482 TGAGACGACATACAAGACCACATAATAGAGGGGATTATAAGAGAACAAACATTTCTTTGCTTCATTTATAGTATCATTGTGGAAGGACGAAATGCTGTAAGTCTGCTTTGCCCGGGTGTGGACTTG---TAATCCACCCAAAACTTTGATTGTTCCCTTCACTTTGCTTTGTAAAAGCTTCTGTGGCTTTTGTGGATTATTACTTCATAATGTTTGGACAAACATCAATTAACATACATCAAAACGTTTCC-ACTTATGTCCCTCTATGAATGGAGGAGACCCAAAAGACAC-ATGGGTTTGGAAACA-CTCACATGGAGATGACAGGAGGCCAGGCTGTGCAG-------------ACAACACAGGTGTGCTGCTAGATATGTGTTGGGAATGGGGCATTTCTTAATGGAGCTTGGAGTAATTATCTAACCAGTCCTCTAAAGAGTGGCTTTATTGGAAACCTTAGCTATTATAAGGACTTTTTCTTTAAACCTAGGAAA chr4 - 94230402 39474200 39474199 39474685 54755718 54755717 54756203 486 TGGGACAGTTTGCATGGCAATATAATAGAATGTACTAATAGAAAACATAA---TTAGTGTTGTATTTATAGAATCATTTTGATGAGTAGACAAGCTTTAAGTTGGTTTTGGTGGGGTGTGGACTTGCAGTAATCCACTCAAAACCTTGATTGTTCACTTGACTTTGCTGTGTTAAAGCTTCTGTGG---------ATTATGGCTTCAAAATGCCTGGAAAAATATCAATTACTGTACATCAAAATTTTTCTTGTTTGTGTCTC-CTGCAAATGGAGGAGGCCCAAAAAACACAATGCAATTGAAAACAGCGCATGCACAGCTTACAGCCTGCCAGCCTACTCAGTCAGACTTGGTACACAAAATGATTTTGCTGACATAGATTTGTTGGAAATATTATATTTCTTTCT-GAGACAGGAATGATTATAAAAACAGATCTCAAGAGAGCAGC-TTACTGGAAACGTAAGCTATGCTGAATAGTAAGTGCTTTTACCTAAGGAA ..:...:::x.:..x.:.x.:........:x.x.:..xx...:....x.x---.:xx..:.x:........x......x..:x::.xx..x.x...x.....:x.:....x:x.............---........:......:..........x...x........x...x.............---------.....x:.....x....::....x...:........x::..........:x....:-::..:....:.-..:::..........:.......:....-...x:x...:.....-.x..::::x..x.x....xxx.....x..::x...-------------....x.:::x.x.....x:.x.x..x......:...:xx::.......xx.-...x:x...:.:.....xx..x...x:...x.:....::..-...:.......x.x......xx.:.:x.x.xxx.x:..xx.....:.:.. 50M3D73M3I57M9D56M1I11M1D28M1I15M1I35M13I51M1D41M1D50M 327/467 70.0% 486/94230402 0.0% 34/467 7.3% 84337854 NA +13737 chr4 + 190214555 123814578 123814577 123814995 418 AAGTTTAATCTATTTTGGTAAAAATACTTATTAAAAAT---GATATTAGACTTCCAAGGTCTTTTCCTACCAACTTTCTTTTGTTGGTTGCCTATCACTTGGC--TATCATTTTTAGACACTAAATGAAGAGCATGTGTAGCAAAGCACAGAAATGCACTTCTATTCCGTATTACCATGGGTAATGTCCAATATGAAATATGGGTTTTCTTGAAGTAGAACACACTACTTCAATTATTACATCCAGTTTGGAAACATGAATATTCATACAATTAGAAACTTGG-AAGCATAGCACAAATTCTTTCTAACTGGACTCTGACCTAGTCATTTCCCCCTTCGCCCCAAATCTGGCCTAAAAATGCAGCCCCAAAGATGAAACGCCATGGTAGCCTGACATTCATTGATTCTAGAGGAAAATGCTAAA chr4 - 94230402 39475485 39475484 39475877 54754526 54754525 54754918 393 AAGTGGTACCTCTTGTGCTATAAGCAGTCCTTGAAGATTTAAATGTTAATTTTCCACGTACTTTTTCCACCCACTTT--------GCTTACATATCATATGGCAGTATCACTTTTAGATACCAAATGAAAAGCATGTGTAGCAGAAGGCAAAAACGTTCTTCCACTCTGTGTAACCAAGGGTAACATCCAATATAAAAAATGGATTTTCCTGAAGTAGAACATGCTACTTTAATTATTACGTGCAGCTTGGAAATGTGACTATTCATTCAATTAGAAGTTTGGAAAGGCTGCCACAATTTCTTTCAGCTTACGCTTTAAAGAG--------------------AAATCTTACCT--AAATGCAG-ACTAGAAAGCAAACACCAAAAAACCTTGGAAGTCATCATGTCCGAAGAAATATCTTGAA ....xxx.:..x..x..x..x..::.x.:x..:..:..---:..:...:x:.....x.xx.....:.:...x.....--------.x..:.x.....:x....--.....:.......:..:.......:.............:.:x:..:...:.:x....:.:..:..:.x....x......::........:...x....:.....:............::......:.........:.x...:.......::...x.......x.........::....-...xx.:x.....x.......x:x:.:x:..:.:.xxx:--------------------......x:...--........-x.:.:.:.xx....:...x::x.x.:..:x.x....::xx..:::..:..x..x:.:.. 38M3I36M8D18M2I178M1I39M20D11M2D8M1D59M 272/387 70.3% 393/94230402 0.0% 37/387 9.6% 84339093 NA +50387 chr4 + 190214555 123832376 123832375 123833344 969 GGGGAGAGAGAGAGAGAGAGAGAGTGAGCAGTGGTGAAGGGTTATGAGTTGTACAGTTATTTCTAGCTT--------TGAATGGTTTCCAAATCTCATACATTCACAGACAA--CCTCGCCAAAGCCCACAGCTGTCATGCATTTTCAACAGATTCCACAGGGCCTAGATGAGGTTTGAAGGCATTCCTTTGCTCTTACACATTAGCTAAAAGGAATTACCGTAACATCTGATATTGTGGAAGTGGGACATTTGCCATCCTGACCTTGCCCAAAGCAGTCCGGAAATAGGAGTCTAAGAATGTATTATCTCATATGGCCCCTAAAGGTCACCAGGGGCCTGTCGGTGGCATTCTGAGAAAATCCAAG-CACCCAATATGCTCTGCATTTGGAGAAACTGGG-----------------------------CTGCTTTGTATGGGC---ACAGTGGGCAGACACATGTTCCCATTGCTCGTTGGATGTTTGTCATAGGAAAGGCATGTTCCACTGGAGAAATTCCCAGCTGTCAGTAATGTGCTGATATACCACAGCCAATCATCAGAGGATGAGCCAAATAAACAGGATGTTCACAATGTGTGTGATTGCATGAGTGTGTAACAAAACTTCTGCCCATTTCACAGCCTCATAATGGGATTGACATGCATTGCTTAA--TGCATCTGTCTGTTTAGGATAGAAAGGCATAAACACCATGGAAACCATGTGTAAGAAAGCCC-TTTCTTTGGCTATATGGGCTGTTGATATGATGGGATGAAATCTGGTA-TAAATTGGGAAAGAACATTGCTTTAATATTATGAGTTTACTTGCTGGGAAGTGCCTTGAAGTCATCCAAACACAGATGAGAAGGAATAATCAGATAATC--AGTAGCTATT-----GAGAGTTAACAAAAGGGGCTGAGT-TGATATGAA----TATTTTTA----CATACCAGTGGCGTCATCTTCATTCTTTCTTCTTGTAAGACACTCATTAGTTGAATTATTTATATAAATGTACAGAA chr4 - 94230402 39479175 39479174 39480193 54750210 54750209 54751228 1019 GGGAAGAGAGAGTGGGAAAGAGACCGA----TGGTGCA----CATTGAATGTACAGTCATTCCCTCCTTCCCTTATCTGAAAGGCTTCCAAATCTCATATATTCACAGGCAGACCCTGGCCAAAGCCTGCAGCTGTCATGCATTTTCAACAGATTCCACAGGGCCTAGATGAGGTTTGAAGACATTCCTTTGCTCTTACACATTAGCTAAAAGGAATTACCGTAACATCTGATATTGTGGAAGTGGGAAATTTGCCATCCTGACCTTGCCCAAAGCATTCCGGAACTGGGGGTCTGAGGATTTATTATCTCAGATGGCCTCCAAAGGTCGTT-GAGGTCTGTCTACTGGAGCTTCAGCACAACTAAGACAACCAATGTGCTATTCATTTGGAGGGATTGCGACATTTCTTTCTCTCTCTCTCTTTTTTTTTTTTTTCATATGGATGAAATAATGGGCAGACACATGTTACTGCTGCTCTCTGGATCTTTGTCATAGGAAAAGCATGTTCCATTGGAGTGATTCCCAGCTGTCAGTAATGTGCTGAAACACCACAGCCAATCATCAGAGAACAGGCCAAATAAACAGGATGTTCACAATGTGTATGATTGCATGAGTGTGTAACAAACTTTCTGCACATTTCACAGTCTCATAATGAGATTGACATGCATTGCTTAATCTGCATCTGCCTGTTTAGGGAAGAAACACATAAACACCATGGAGACCATGTGCAAGAGAGCTCAGTTTCTTGGCAGCGT-GGCTGTTGATATGATAGGACAAAATCTGGTATTGAGTTGGAAATGAGCAGTACTTTAGAACTATTCATTTATCTGCTGGGAAGTGCCCTGTAGTCAGCCAAGCACAGTTTGG--TGAGTGTTCGTGTAATCAAAGTGGCTATTATAGCAACAGATGACAAAAGTGCCTGAGGATGATGCACAGAGCTATTTTCAAGGGAACATTTGAGACGCCATTTGTTTTCTCTTTGTTTTGATTTCAGAAGTTATTTTGATTGTTT-TATGTATTTACAAAA ...:........x.:..:.....x:..----.....x.----:..x::x........:...:.:xx...--------....x..:..............:........:..:--...x.........::....................................................:..................................................................x............................x.......x.:..:....:..:..x..........x......:.:.......:::-.:..:.....x::x.x.x::.x..x.x.x.:...-..x.....:....x.x.........::.:..x.-----------------------------:.x:..::.....::---.:.:................x.:::.....x:.....x..............:..........:.....x:..........................x.:....................:.:::.............................:.......................x:......x..........:.........:....................--........:.........:x.....x:...............:........:....:...:.-x..::.....x:::.-...............:...::..........-.:.:....:..x..:..x.:.....:x.:...xx:....::..............:..x.....x....:.....x.x:.--x..:.:x..:x:.....--...:......-----:.x..x.:.......x.x.....x-....:::x.----......:.----x.:.::x.x.:..:...:.x:x....:.:.x:..xx.xxx..xxx:...x..x:...:...-...:x..x....:.. 27M4D7M4D27M8I35M2I218M1D34M1I33M29I15M3I228M2I62M1I15M1D31M1I80M2D17M2I10M5I24M1I9M4I8M4I61M1D15M 767/956 80.2% 1019/94230402 0.0% 76/956 7.9% 84353201 NA +3378 chr4 + 190214555 123843601 123843600 123843693 93 GAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAG--AAGAAAGAGAAAGAAAGAAAGAAAGGAGGGAGGGAGGAAGGAGGAGAAAAAATCAGA chr4 - 94230402 56708876 56708875 56708970 37521433 37521432 37521527 95 GGAAAAAAAAAAAAGGGGGGGGGGAAAAAAAGGAAATCAAGAAAATAACACATAGGAGGGAGAGGGGAAGTATAAAAGGACAAGAAAGAATCAGA .:....:...:....::::.:::....:....:..:--......:x:.x.x.x..:.:.:.::.:..:..x:x::.....x:.....:....... 36M2I57M 59/93 63.4% 95/94230402 0.0% 2/93 2.2% 67134725 NA +3008 chr4 + 190214555 123843864 123843863 123843921 58 AAGAAAGAGAAAAAACAAACAACAAACGAACAAAACAACAACAAAAAACACCATGAAA chr4 - 94230402 16367967 16367966 16368024 77862379 77862378 77862436 58 AAGGAAGAAAAAAACCTAACAACAAACAAACAAAACAAAACACAAAAACTTCTAGAAA ...:....:.....x.x..........:..........x.xxx......x:.xx.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 107475897 82738658 +15598 chr4 + 190214555 123849448 123849447 123850042 595 TATCAATTACTTTTATTTGCATTCATCGGAACTGGTATTGCAAACAATTTGTCTGAGTGGAATGAAAGAAGAGACTGAAGTCCTTCAGTAACCCCTCTCATTAATTCTTTGTGCAAACAAACTCTAGTTGGGTATAAAGCCAGATAACCTAATGGATGTTTTGTAGAGGATGTGCAGCCACTTTGTTTACTAGTTAAGTTTTATCAAATAAGATGGACCAAGAAAAGCCAAGAAAAG---TTTACAGCTCTATAAATCTCAAGCTATATTTTGAACATTCCTGAAACACCCAATCTGCAGACTTTAGCTTTGAGTAGATTTATAAGAGTCAAAAGTCACAGTCCTTGCAAACAGAGGAAACAGCACATAGAGTTTTTGTTTATTTTCTGTCTCTTAAAAAAATCAAATATGGCCATCAAGGATGTAAAACGCCAATAATCAACTACTGGTAGCAGAAATAAGGCCTGTGGCTCTTTTTGTCTCCTTGGTTTCCACATGTAAAAAAGGCAGGTGAAGAATCTTTCAGGTTTTTT-----CTATT--TTGTTTTAACCAACTTTT--------------------TAATACA-TTTGTTTTGAACAATAGGGGAATTC-CATGAAACAT chr4 - 94230402 39487655 39487654 39488244 54742159 54742158 54742748 590 TACTAATAACTCTTGTTTGCAGT----------GCTACTGCA-------CGTGTGTGTGGG-TGACAGTAAATCCTG----TCTTCACCTGCTTTCAATGTTAATATGAGATACAAATGAATAGTTGTTTGTAATAGAAATAAATTACCCATTAGATAGTTTCCAGAGGATGTCCAACTCTTTTGGTTA------AAG-------AAATAGAATTGACAAAGGAAAGCCCAGAAAAAAGATATATTGTTAGAGAAATTTTGGG-TGTATTTTGTACATCCTTGGAACAACACAACTTTAGACATTAGCTTTAAATAGATTTACAGAAGTCAAAGGTCATAGTTCGTGAAAACAGAGGAAACCGTGCATAGAGATCATGTTTATTTTCAGTCTCTTAAAAAAATCAAATGAAACCATTCAGTGTATAAGGCAGAAACACTTTGTTATGAGTAGCAGAACCAAGGACCATGGATATTTTCATCTCCATGGTTACCATGTGTAACAAA-ACAGATGTAGAAAAACTTATGTTTTTTTCTCATCATTACTTGCCTTCACAGatttttattattattattattattactattaCAGTTTGTTTAAAGAAATACAGGAGTTCTCTTGGAGCAT ..::...x...:..:......x.----------.x..:....-------:..x..x....:-...x..x.:.xx...----:.....x:x:.::::xx::.....x:xxx:.:....::..:xx.x...x.xx...:.:x:.:..x...:.x.:...:x...x:.........x..:.:x:....x...------...-------.....::..x...x...:......x......:---.x..:x.:.xx.x....:.:::.-.:.......x....:.:..:....x.xx.x..x:....x........:.:........:.::.......:....:...:.x..x.............x.::.......x.:x...........x....................:x::....:x..x:.:...::.:xx..:.x.:x::..:x:.........x:....x.::...x.x....::.....x.....x...::.....x...-:...:..x....xxx:.:.x.......-----::...--...::..x..x:.:....--------------------..x....-.......x:.:x....x:...:...-.x..:.:... 23M10D9M7D12M1D15M4D108M6D3M7D32M3I23M1D241M1D27M5I5M2I18M20I7M1I25M1I10M 381/558 68.3% 590/94230402 0.0% 69/558 12.4% 84361793 NA +18061 chr4 + 190214555 123854901 123854900 123855601 701 ATAAATAATCGCTACATATGTATATAAAATAACCACAAT------------GAATTTTTACAAGTATTGGATATAAATGAAAA------------------AGTGAAAATTTCATACATCCTGCTTAGATATAGATGAAGCTGTTTTGCATGCTTCTCTTTCTTCAGTATTTAATTAGGAGATTTATCTACCTTATTGTGTAACTTGATTTTATATTTTACGTGTAAGAA-GGTGAATCAACTTTTCTGTATTGCAACAATCTTCGTTAACATTTTCAACATGTACTTTCACTTTAGCTGATTTATAATTGCAGCTTCACTG-CTTTATTGTCGTGTTTTATTCCTAAAACAATGTGTTTCTATATTTAAGGATGATATGGTGCACAAATGT---TGTTAAGCATACAAATTGATGGCATAATTTGCCCTTGACCTTGGATCTTGGTGGTTGC-TGGGACACTGAGGAGAGAGCTTTTTTTTGGCCATGTGGGAGACTACCAAAGGCATCAATTTTAAAACTAGACTGGAGCAATTACCATTACATTTATGTTAGAGGTTAACATTTGTGTTATTTCCTCTTATTGCCTGGCTTTACAGAATGTTATGCCCCACTGCTTTTATTAAATCCAGGTAATAGAGGAAATAACAGTGTTATTAACCTCTAACACTGATGAAAAATTAGTCTTAAGTAAAACATGGTTTAAAATCAGAGCCATTGAGCCAGTACTTTAGCTG chr4 - 94230402 39492928 39492927 39493617 54736786 54736785 54737475 690 ACAAAGAATATTTGCACACATTTCTCAGATTACTCCAACAGTCATACAAGAGAGtttttaaaagt-ttatttaaaaataaaattgcattttatatttaattaataaaaatttCATATATC-----TAAGCAGACATGA-GCAGATATCTGTTCTGTTATTTCACTATGAATTCATTTGGAG-------TGTATTTTTGTTTAA-----------ATTTCAGACAGAGGAAAGGTAGGGAAAATGTTTTG----GCAGGAAGCTGCCTCTGTATCTTAAATACGTACATTTAAGGTAGCT-ATCGCTGATTGCTCCTTTTTTGTCTGTATTAGTGTGTTT-ATTCTTTGTGTGACATCTTTGTCGATTACTGTGAAGTATGGCTTA-AAATGCGTATGTGAGAAGCAGGAATGAGTAGCATAGATTGCTCTTGATCTGGGAAATTGGTGCCTGCGTAGAACACAGAG-AGGGAGTTTTTGCCATGCCGCTTGGGGGACTACAAAAGGCATTCATTTTAAAAGTAGACCAGGGTAATTACCACTACATTTATGTTAGAGGTTAACATCAGTGTTATTTCCTC-TATTGCCTGGTTTTACAGAATGTTATGCCCTACTGCTTTTATTAGATCCCAGCAATGGATGAAATA--AGTGTTATTAACCTCTAACACTTG-AAAAAATTAGTCTTAAGAAAAAC-------AGAAACAAAGC---TGGGCAGTTACTTTCTCTG .:...x...xx:.:..:.::.x.x.x.:..x..:x...:------------..:......x....-..:xx..x....:...x------------------.:.:...........:...-----..:::.x.x....-..x.x.x.x::.x..x:.x....x::.xx.x..x...x....-------.::x..x....x...-----------....:.x:::x.:...-...:::xx..x.x..:..----...:x..x..x.x.:x::..:..x..:.:....x..:.xxx.....-..:xx.:.....xx...:x:..-..x....:x:......-....:.x:x:::.::.x...x.xx...xxx.x:x::.....:x:.-.....:---...x.::x::.x:...x::.:.....:x....:.....:..x...xx......x:...-.:.:....x...-..:...:....x::xx...::x....:......x........:x.........x.....::.:.:........:........................:x.............-..........:...................:.............:....x:.:...:..x......--......................x:-:................x.....-------.:..x..:...---..:..x:x......xx... 39M12I14M1D17M18I19M5D13M1D42M7D15M11D16M1I18M4D46M1D22M1I16M1D45M1D6M3I58M1I12M1D113M1D66M2D24M1D23M7D11M3D19M 460/654 70.3% 690/94230402 0.0% 83/654 12.7% 84361973 NA +33380 chr4 + 190214555 123856887 123856886 123857621 735 AACAATCCGTTT--ACTTTTTAAATTAACAACCACTTCAATGG-TTAATTGAGTATTTCTAAGCCAATAAATTACCCTTCAACATTACTGACTGGAAGCTTAGTTAGTATCCAAAACAAGCCTGGCATTAATGAACTCATTCTCCAACAAAAGGAAAAGGAAGCATCAAATCTGAACTTTGGAT-GTGTTCGGTTCCTT-ATTCTAAACACATTAGTACACTGTATTTTCCCACTTAGAGAAGCTTTTGTACACTGAGCATGTGGCTGTTTAAATGCCCCAGCGGGACATCCAGAGGCTGCAAAAACGGGAAAAA----------------------------------------------------------------------TTATTTGGAACAATTTGCTTTCGTTCAAGGGCAAC------CATTTTACAGCTGGTTTATTGCTATTCTTGTGCTGTTTAAGCTGTCTTTCGTGTCAAAAGTCCTTTCCTGCTTACAGATCATCAGGAAGCATTCTG--CTGCGTGCTGTTTGCCTAAGTTCCTCCA-GGGCTCCGGGCCTTTGATCACGGATACCATTTGCAATCTGGTTAAAAATAGGAGGCTGCTGAGATAAGCTTGGGTCCTGGCAGTGAGGAAAAGGCC--CTTTCCTTTTTTTTTTTTTCTTTTTTTTAAACTTTGTTATTTTGCTTTTTAGCATGGGAACACATAATTGAAGCAAAG-AGGAATAGTGCTTAGAAATTATAGCATGCTTAGAGGTGTAAAAAGTTTGTGTGAAAAAAGGTTATTGGTTATTAAAAAGTTCAGTTTTTTGA chr4 - 94230402 39495034 39495033 39495813 54734590 54734589 54735369 780 AATATTCCGTTTTTACTTACTTTGCTAACTATCTCCTCAATTGCTTAATGGAATATTT-TAAGCTAATAAATTACCCTTCAACATTTCTGTCTGGAAGCTCAGTCAGTATCCAAAACAAGGTAGTCATTAATGAACACTTCCTTGCACAAAAG-AAAGGAAGGCAGCAGACCTGAATTGTAGCCCTTGTTTGGTTCCCTGATTCTAAACACATTAGTACACTGTATTTCCCCACTTATATAGGCTTTTGTATGGTGAGCATGTGACTGTTTAAATGCCCCAGCAGGGCATCCAGGGACTGCaaaaaggaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaagaaaaaaaaaaagaaaaaagagaagaaagaaaaagaaaagaaaaTTGTTTGGAACAATTTGCATTAGTTCAAGGGCAATGTTAAGCATTTTACAGCTGGTTTATTGCTATTCTTGTGCTGTTTAAGCTGTCTTTCATGTCAAAAGTCCTTTCCTGCTTACAAATCATCAGGAAGAATTGCGGCCACCACGCTGTTCGCCTAAGCTCCTCCAGGGGTTCTGGCCCTTTGATCACAGATATCGTTTGCAATCGAGTTAAAAATAGGGGGCTGCTGAGATAAGCCGAGGCTCTGACAG-------GAGACCAGCTTTCCCT------------TTTCTTTCGGACTTTGTTCTCCCCTTCCCTAGTATGGGAACACGTAATCTTGGCACAGAAGGAGTAGT--------ATTATGGCTC---------TGGGAGACATTTGAAGGAGCTAGGGGGACTGG----TAAAGAGCTCAGCCCCTTGA ..:.x.......--....x:.xx::....x.:.x.:.....x.-.....x..:.....-.....:.....................x...x.........:...:...............x:x.x...........x.x.:..:xx.......-...:.:.:...x..:.:.....:.x.:.x:-x....:......:.-............................:........x.x.:.........::x..........:..................:..:.......:.:.........x.::.....----------------------------------------------------------------------..:...............x..x............:------..................................................:.........................:............x...x:.--.xx.::......:.......:.......-...:..:..x...........:....:.:.........x:............:................:x:..::...:...-------:..:..--......:.------------...:...:::........x.:::x:.:::...:..........:....:xx:...x..-....:....--------.....:..x:---------..x:.:.x:....x:x..:xx.:..xx.:...----....:..:....::::.... 12M2I29M1I14M1D94M1D30M1I14M1I115M70I35M6I96M2I28M1I83M7D6M2I8M12D58M1I9M8D10M9D32M4D20M 556/693 80.2% 780/94230402 0.0% 129/693 18.6% 84361853 NA +41745 chr4 + 190214555 123869238 123869237 123870439 1202 AATCCATGTAATCGCCTTATAGTATGTGGCATGTACCAATTCTCATTGCCAAACGAATCTG----------TGAGGAAGAACTGCCCAAATACAAACAGCTTTATTGGATGCCTC-----AGGAAGCAGGGAATTAGAGTGATTGCTTAGGCTTCAGGCTTTGCAATTACAACCTGACATTTTGGTAACAGCAATTTAAAATTTAAGTTCCAAAAAGGCTTAAGACCAAGTCTGTCATTTGACACTTTTTTCCCTCCACATTTTTGGGAAAAGAATGAATTGCTTAGAAATGGATCTTGTGGAACTGCTAGAAATTTTTTCTAAGTGTTTTTGGTCTCTGAAATGAGCTTACTTAATGTGTGTTCATTGTGTAAAAGAAGCAATCTGT------------CTGGTATAGACAGGAATTGGATCCCCATGGTAAACAAAAT--TGCCTCAGCCTTGCTGGAGCATGTACTTTCTAAGCAGTGGGCACAGAGACAGTGTAATTGGCTACCTCCTGCTTGTAAGTATAGGTATGTTAAATGTGGGCCTGAGGGGAACCTCCATTTTGGGTTGTAGTTTATTATTAGGTGAGGAAATTACTGGACACCTCCAGCTGCCATTAATCAGCCACAGAGTCAGACTGGAGCCAAGGGAGAAGCCTGTGGGTGGATTCTGCCCAGTGCTGTGGAAATACAAGAAGACGGAGACAAATGTTTTCCAGCCTAGCAGCTCTAAACTCTGCCCTTTCACAGTCCTTAACATGCATGTTCAAATTGATTTAGTCCATTTACCCCCTCAACCTAACCATCTATTTTCCTTGAAGACTGACAGTTTTATGTGTTGCTACCATGTTATTATGTGTTGCTGCTCTGCCGGTAGCTATAGTATTTCAGAAACATTTACTTCCAGACATAAAGGATGAATGAGGAGGGGGGGAATGTAGAGAAAGGGAGGTGAGGTTGAGTCATTTTAATTCCTTTTTTATAGGGTGCAAAACATGCCCATCTTGGCACTGA--CTTTCTCTCTCCCTCTCGTTTTTTTCTTTAT-------TCCTTTTCTCTGTCAATGATTT----------------------------------CCATGATAAAACCTTGAATAACATTTCCCACTTGAGAAACGCATCTGTCAGGTGATGTCAATGCCTGGCTTACTCCTCTTCCTGTTGGG-TTGCAAACATGGC-----CTTCTCTCATGGTCCTGGAATGCTGACATGGTCGGGCAGCCAGAGCCTAACACAGGTAGGGTCA chr4 - 94230402 39501295 39501294 39502509 54727894 54727893 54729108 1215 AACCCATGCCACTCCTTCA------GCAACAAGTCTCTGCTTTAATTGCTAACAAAATCTGGAAAAGTTCTTGTTAAGGATGTCTCTTCATATAAAACACTTTATTGGGCACCCTTGGGTAGGAAGTGGTGAGCCAGACTGATTGCTTAAGTCTCAGCCACTGAAATTGTAATTGTGTGTGTTGGTGAC-----CCTGGGATTTGAATTAGAGAAAG----AAAATCA---CTGTT-TTTAAGATCATATTGCTGTTAAGATTTTTTAAAAGGAGGCTATATTCCAG---------TTGTGAGGATGCCC--CCTTCTTCCCCCTCCTCTTTATTCTTTTTTTTACAATTCCTT-------TTTAAGAGTGATGCAGATGTTATCTGAGCCTTGTTTACACTGCCATAGACAAAGATGATATGCCCGAAGTCAGCTAAGTAATCTCTCAAAGCCACTTAAACCTGCATTATCTGAGAGCCGTGAGCAGACACATGATAATTGGCTTTCTCCTGGTAGTAAGTAGAGCTATGTTAAATGTGGGCCTGAGGGGAACCTCTGTTTTGGGTTGTAGTTTATTATAAGGTGAGGAAATTACTGGACACCTCCAGCTGCCATTAATCAGCCGTGGAGCCTGACTGGAGCCAAGCGAGAGGCCTGTGGGTGGATGCCGCTGAATGGCAGGGAAATACAACGAGACAGAGACAAATGTTTTCCAGCCTAGCAGCACTAAACTCTGCCCTTTCACAGTCCTTAACATGCATGTTCAAATTGATTTAGTCTGTTTACCCCCTCAGCCTAACCATCTATTTCCATCCAAGAGTGACAGGTTTATGTGTTGCTACCATGTTATTATGTGTGGCTGTGCAGCCAGTAGCTATAGTGTTTCAGAAGGGCTCACTTCCAGACATAAAGGA-----GAGGGAGGCGGG-------------------GAGCTTCAGTCA-CTTAATTCC-CTTTTACAGGGTGCAAAACATGTTGAGCATGACACCAGttctctctctctttctttccttccttcctttctccccccatccctcccCCTtttatttatttattcatttatttattgatttTGGGTCAGCACACACCATGAAAAAGCCTTAAATAAACTTGCATGCTTGAGAAGCACATCTGTCAGGTGATGTAAGTGTCTGGCACGCTCCCCTTCCTGTTTAGCTTACAAACATGCCGTTCAGTTCCTCCATGGCTCTGCTGTGCTGGCGGAGGC-TGCTGGCAGAGGCTCA-GCAGGAAGGATCA ..:.....:x.::x.:.:.------.:::..x..x:.x::.:.x.....:..xx:......----------..xx:.:..xx.x:.:xx...:...xx:.........:::..::-----......::.x..:::...x..........:.::....x.x:..x....::..::xx:::.x.....:..-----::.:::....:.:..xx.:....----..:.:..---....:-...:.x.::x.x..x.:x::.x:x....xx:...:..:xxx..xx:::..---------.....:::x...:x--xx..:..:.:xxx:x.:...:x...:.xxxx.:x:x..x...-------x..x.xx...xx:x...x.:x.....x------------...x:.......:::..x:x..x...:x:..x.:.x..:.--.x:....:xx:::..x:.:.x..:.:.x...:..x:x:.x.x:....x...xx:.........x:......x.x.......x..x..............................::.....................x............................................:::...:.x.............x....:..............x.:..:x.:..x::x..........x:....:...........................x.....................................................::............:...............:.x.:x....x......x..............................x....:x.x...:...........:........:x::.:..................-----....::..x...-------------------...x..x.....-:........-:.....:...............::x.x.x..:...:::--..:.......::..:..x..::..:....x.-------...:.::.:..x.:.x.x....----------------------------------......x...:....:.....xx..x.x::........:.:.................x.:..:.....x::....:.........x:.-..:........x.-----x...:::.....::...xx:.....:.:x:.x.-x..x.x.....x..x.-:....x...:... 19M6D36M10I44M5I69M5D23M4D7M3D5M1D50M9D14M2D42M7D27M12I40M2I473M5D12M19D12M1D9M1D38M2I31M7I22M34I89M1I13M5I33M1D16M1D13M 818/1137 71.9% 1215/94230402 0.0% 143/1137 12.6% 84367943 NA +17078 chr4 + 190214555 123876538 123876537 123876985 448 TCTCTTTAAATAGACAAGTGGCA------AATTGACCAGCAAGGTAGCTGGCCAGGGTTAGAACTCTGTTATTGAATTCCTATGGTGGGAGTGAAAACAAAAATACTGATGGATACCTATGTTATGCCTACAATTAACAGAGTAAACATCTTAATAGGCATAGAAGACACAAACAGATGTTCTAATTGCATGTCTGTGAGAAACTGATGTTTACTAGTTCCACTCTGGCTTGGCCTTTGAGACCTCAGGAAGTTTCTCTCCCAGTGGGGATTTCAGTGATTTATTGATTTCAGTACAATGAATATTTCAGAGACTCGCAGGATTTTTAAGAGGTTAAATACATCCTTACAAAGGTTAGCATT-ATTCACGCTTGAAGGGAATGCTTACTCTACTTTAACCAGGGTAGCTATGGCCACA-TTTGCCACATTCTTGCCTAAGTGGGAGAGAAGATGGA chr4 - 94230402 39508557 39508556 39508987 54721416 54721415 54721846 431 TCCCCTCAATTAAAAATATGGCAGTGAATAATTGACC------------TGCTTAAGTTGAATATAGGATGCTAAGTTTCTTTTGTTAGACCAAAAACAAAAATAC-----AACAGCTATGTTTTGCCTACAATTAACAGAATAAACATTTTAATAGGCACAGAGGACACTAACAGATGTTCAAATTGCACATCTGTGAGAAACTGATATTTCCTAGTTCCATTGTAGTTTGACCTCTG-TACCTAGGGAAGTTTTAGTCCCA--TAGGATTTAAATGATTTATTGATCTGGATGCCATGAATATTGCAGAAACAAGCTCTATTTCTAAGAAGTTAAATACACCCTCATTCTGTGTAGCATTAACTCATGTTTGAAAGAAATCC--ACGCTGCTTTAATCAGAGCAGA---GGCATCAGTTCACTGTATCCTTGAGCAAGGGGGAGGAAAGATGAA ..:.:.:..x..:.x.x:.....------........------------x..:x::...::.xx.xx.x.::.:.:..:..x.x..x:..x::.............-----:.:.x.......x.................:.......:..........:...:.....x...........x.......::................:...x.........:.x.:.:...:...:..-x....x:........:xx.....--x:......x.:............:.x::.:.x.........x....:..xx..xxx....:.....:..........:...:.:xxx.xx.......-.:...:.:.....:.:...x.--..x..:......:...:.:..x---...xx..-..::.:::..:....xx:...x.....::......:. 23M6I8M12D57M5D128M1D23M2D97M1I21M2D22M3D7M1I37M 311/423 73.5% 431/94230402 0.0% 33/423 7.8% 84367981 NA +3366 chr4 + 190214555 123879418 123879417 123879481 64 CACAGAGACACACACACACACGTGTGTGTATATATATATATATATATACACACATATATATGGA chr4 - 94230402 65311240 65311239 65311296 28919107 28919106 28919163 57 CAAGAAGACCCAGACA-------GTGTGTATGCATATATTTATATATACACACATATATATGGA ..x::....x..x...-------........::......x........................ 16M7D41M 49/57 86.0% 57/94230402 0.0% 7/57 12.3% 58568178 NA +3108 chr4 + 190214555 123879439 123879438 123879533 95 GTGTGTGTATATATATATATATATATACACACATATATATGGATAAAGAAAAGGAATATATCCATATATATATATATATATATATATATATATAT chr4 - 94230402 87985347 87985346 87985441 6244962 6244961 6245056 95 GTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT ......:.......x....:.:.:x:x:.....x:Xx.x.xx.xx...x.::.:x:.:...x:....x.:............::.:.x..:..:. 95M 60/94 63.8% 95/94230402 0.0% 0/95 0.0% 35894092 NA +3499 chr4 + 190214555 123879439 123879438 123879552 114 GTGTGTGTATATATATATATATATATACACACATATATATGGATAAAGAAAAGGAATATATCCATATATATATATATATATATATATATATATATGGATATATATATTGGATAA chr4 - 94230402 87985345 87985344 87985458 6244945 6244944 6245058 114 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTTGCTGAAGAA ................x....:.:.:x.x:...:.x:Xx.xxx:.:x:.:x...:.::.:.x:......x.:............::.:.x..:...xx:x..:x.::..:.x.. 114M 70/113 61.9% 114/94230402 0.0% 0/114 0.0% 35894094 NA +3103 chr4 + 190214555 123879441 123879440 123879494 54 GTGTGTATATATATATATATATATACACACATATATATGGATAAAGAAAAGGAA chr4 - 94230402 34061864 34061863 34061917 60168486 60168485 60168539 54 GTGTGTGTATATACATACATACATACACACACGTACTCAGAAAAGAGAAAGGAA ......:......:...:...:.........::..:x::..x..:::....... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 89817577 NA +3238 chr4 + 190214555 123879443 123879442 123879556 114 GTGTATATATATATATATATATACACACATATATATGGATAAAGAAAAGGAATATATCCATATATATATATATATATATATATATATATATGGATATATATATTGGATAAACAA chr4 - 94230402 87985345 87985344 87985458 6244945 6244944 6245058 114 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTTGCTGAAGAA ....:.:.........x....:....x.x..:.:.x.Xx.xxxx.:x.:.x.x:x.:x::.........x.:............::.:.x.:x..:.x:x..:.x.x.:..x.. 114M 71/113 62.8% 114/94230402 0.0% 0/114 0.0% 35894098 NA +12147 chr4 + 190214555 123889755 123889754 123889948 194 AATTTATGCAGTTTGGAGAAGGCATAGAGATAATGTCAACTTTAATTCCTGTTTTTTCCCAAACACAGAGAATAGGCCAAAGGTCATGTGTGGAAATTAAAAAAAAATGGAAAACAGATGTTAGGAAGCTCACTATAGGAATGGAAACACAAGCAGCACTGAAAATTATTTAAAAGCAAAGCAAAACAAACCTT chr4 - 94230402 39511562 39511561 39511753 54718650 54718649 54718841 192 AACTTATGCAGTCTGGAAAAGGCACAGAGATAATGTCAGCTTTAATTACTGTTTTCTTCCGAACACAGGGAATAGGCCAAAGGACATGAATGAAAATTAAAGAAAAATGGAAAACAGATGGTAGGAAGCATGCTACAGGAACTGGAATACAGGCAGCACTGTAGATAATTTACCA--AAAAGAAAAGGGACCTT ..:.........:....:......:.............:........x.......:.:..:.......:..............x....x:..:........:..................x........x::...:.....:x.:..:...:.........x.:..x.....xx.--...:x....x::..... 175M2D17M 157/192 81.8% 192/94230402 0.0% 2/192 1.0% 84378193 NA +4122 chr4 + 190214555 123892370 123892369 123892464 95 TATTATAATTTCTATTTTAAGGTTGAGGAAACTAAGTCAATAGAGAGGTTAAGTAATTCACCCAAAGTCACATAGCTGGTGAGAGGCAAAGCTAG chr4 - 94230402 80987859 80987858 80987952 13242451 13242450 13242544 94 TAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACA-GGTGAGTCAGTGGCAGAGCTGG ..x..xx..::........x:.x..:.......:..x..x........:..x..:.:.::.....:......-:.:x:..x..x....:....:. 72M1D22M 67/94 71.3% 94/94230402 0.0% 1/94 1.1% 42904511 NA +8449 chr4 + 190214555 123893082 123893081 123893313 232 GTAATCTTTATTATTGAGACACAACAACTTTATTTCATAATCATTTTCTTCCGGCCAACCAGCTGTGATTACTCAAGGAAGATTAACTAAAACCTGATGGATTTCAGCCCCTATTCAGCAATGCCAGCCAAATACTATAATTACACAGGATGCAGGCTGAGATAATGTCGACCTTGTACTTAGAGATTGTCCTAGATAAGTTGAACGGTCAGATTTGCAGGTCGGGTTTTTC chr4 - 94230402 39513473 39513472 39513688 54716715 54716714 54716930 216 GTAACCTTTATTAT-AAGATAC--CAA-TTCATTTCAGAATAATTTTCTTCCAGCCAGCCAGCCATAGGTACTCAAGGAAGATTAACCAGAATGCAATTGGTTTCAGCCCTTATCCAACAACATGTGCTAAATACCACAATTATACAGGATAC------------TGTGAACCATCAACTTAGTGATGTCCTTACCTAATCTCAGCTGTCTTGTCTCTGGGCAGAGCTTTTC ....:.........-:...:..--...-..:......x...x..........:....:.....::.::x..................:.:..:x::..x.:.........:...:..:...:::xx..:......:.:.....:.......:.------------...x:...x.xx......x...xx:.:..xx...x:.x.:.x...xx:.:.x::..:x.:.:..... 14M1D7M2D3M1D125M12D67M 154/216 71.3% 216/94230402 0.0% 16/216 7.4% 84379609 NA +3693 chr4 + 190214555 123921895 123921894 123922054 160 TTGGAGATATATATATATGTGTGTATATATATATGTG-TATATATATATGTATATATATGTGTATAT-----------ATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACACATATACATACACACAC chr4 - 94230402 14964717 14964716 14964884 79265519 79265518 79265686 168 TTGGATAT---TACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x..---..:x:..:x:......x...:.x...-.:x::.:x..::x.x..::..x....:.:-----------.x...:..x...:.:x.x..:.-....x.:::.x..:...x.:::....:.:.::.:.:.......:..xx:.:......::...:........ 8M3D26M1I29M11I22M1D71M 99/156 63.5% 168/94230402 0.0% 16/156 10.3% 108957178 81257377 +3431 chr4 + 190214555 123921945 123921944 123922034 90 ATATATATGTGTATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATAT chr4 - 94230402 70982597 70982596 70982681 23247722 23247721 23247806 85 ATATATATATTTATTCATGTA-----ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ........:.x...x:....:-----.:x.x.x.x:x.:.....:.....:......:......x:...x..:.....::..:..:.:.. 21M5D64M 60/85 70.6% 85/94230402 0.0% 5/85 5.9% 52939348 NA +3299 chr4 + 190214555 123921952 123921951 123922025 74 TGTGTATATATGTGTATATATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA ......:...:x........::..:.::x....:.xx:.............:...x:::.:.:.-..:...... 64M1D9M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% 86558912 NA +3272 chr4 + 190214555 123921971 123921970 123922084 114 ATGTGTATGTATATGTGTATGTATATGTGTATATATGTGTATATATATGTGTATATGCATATATACACATATACATACACACA-CATACATAAGTATATATATAAAATTGCTGGA chr4 - 94230402 68558024 68558023 68558138 25672265 25672264 25672379 115 ATGCATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATATATCCCAGGTTTCCAGA ...::....:.:.::x.:...:.....:..:........:....xx:.:x:.x..::.x:.:........x.x:x.x:x:.::-....:...x:.......x:x.::..x.::.. 83M1I31M 69/114 60.5% 115/94230402 0.0% 1/114 0.9% 55363947 NA +3008 chr4 + 190214555 123921995 123921994 123922069 75 ATGTGTATATATGTGTATATATATGTGTATATGCATATATACACATATACATACACACACATACATAAGTATATA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ...:::..x.....:.....:.........:xxx:...:..x.xxx:....:..x...::.:...:.x:...... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 69628841 NA +3416 chr4 + 190214555 123921998 123921997 123922076 79 TGTATATATGTGTATATATATGTGTATATGCATATATACACAT------ATACATACACACACATACATAAGTATATATATAAAA chr4 - 94230402 8395789 8395788 8395873 85834530 85834529 85834614 85 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ...:.:.......::...x.::.....x.:.....:..::.x.------.....:.........:...x.x::.x..:x...... 43M6I36M 57/79 72.2% 85/94230402 0.0% 6/79 7.6% 115526209 74688346 +20977 chr4 + 190214555 123950521 123950520 123951119 599 TTTTAACAGTCTGGAGAACCCCCAGGGAAATTGGTTTCTTAGGATTATTGCAAATAA--GATCTGATTAGTTAATTATTCCTTTGTCTGAAAGAGCCCATTAAATTTGATGAAGGAATCTGTCAATGCATTTAAAGGTACAACTGAGTGAAAGGTGAGAACAAATGCTGACAAGTATGGTAAACATAAGACACACCTGACAAGACACAG-GACAAGTTAAGCAAATGGCTCATAAAACTGATTTAGCAGGAGGATAGTAAAATCCTTCCTTTCAAGGGATTTGCCTTTTTACTAAGCATTTATTTGGAGACA-GGATCTACTAAGGAAGGTGGACTGCATAGTTTTTACTAGAATTTACAGACATCAATCTTGTATAATAATTCTTTATAATGGCACTAAATCTATTAAGTTCTTACAGAC-ATTTTTCGTTTACATAAACATTT-TCTTTGACTAAAGTCAGACATTCACTCTTTCTTGGCCATAATAATTATTTTTGACAGGTACTCTTCTATATCTCTTTTAAACGTCATACAGAATTGGGTTTCTATTGTGGTGAAAGCTGCCATAAGGTAATGATTTAGAAATAATTACAATGAGAAATT chr4 - 94230402 39538888 39538887 39539469 54690934 54690933 54691515 582 TTTTAATCGTCTG-AGGGCTTGCTGAGATATTGGTTTGTTAGAGTTACTGCAAATAAAAGATCTCATTAGTCAATTATTTCTTTGTCTAAAAGAAGTCATTAAGTTTGGTGATAGAAGCTGTCAATGTATAAAAATATACAACTGAATGGAAGGTGAGAACAAATGCTGACAAGTGTCGTATACAGCCGGTGCTCTTGACAAGACACAGCAATGAGTTGAGCAAATGGCTCATAAAGCTCATTTAGCAGGAGGACAATAAAATCCTTCCTCTAAGGTGATTTAGTTTTTTAGTAAGCGTTAATGTGGAGATAGGGGTCTACCCTGATAGGTGGGGGTGCTTGCTTTTGCTAGACACTACAGATAGCGCTGCAATATAACTTCAGTTTATTATGGCACTAAA---ACTGAATTGTTTTAGTCTATTTTTTTCTTGGATTGAGGTTTGTCTCTGACCAAAAGGGAATAGCAATTCTTTTCCT---------ATTGTTTCTGATGGACACTTGTCTCTGTGTCTT-------TCTTAAAAGCATGAGTTCCCTTTGTGCTAAATG--ACTGCAAGGGAA-AATATATTATTGGTTATGAGAGGAAATT ......:x.....-..::.::x.x.:..x........x....::...:.........--.....x......:.......:........:.....:x:......:....:...x:...x.........:..xx...x:.........:..:.........................:.x...x...xxx.:::.x.:.............-:.::....:.................:..x..............:.:.............:.x.:.x.....:x:......x.....:..x..x......:.-..:.....:xx.:x......:xxxxx.x.:....:.....xx:......:.x.:x.x:x:.....:xx:xx.....x...........---.:.:.:..x..x:..x.-......:x:..:x..x:.x:...-...:....:...:xx::.:.x:x.:.....:::x---------...:...:...::.::...:x...x.:.x....-------..x..x.::xx..:...:.:x.....x.:..x.--:.:::....x..-:..x..xx.x.::...::.x::...... 13M1D43M2I150M1I102M1I88M3D17M1I23M1I34M9D33M7D33M2D12M1D28M 406/576 70.5% 582/94230402 0.0% 29/576 5.0% 84411633 NA +11441 chr4 + 190214555 123976214 123976213 123976483 270 TGGAAAAATTCATAACCTGGCAAAAT-AAAAGCATTCATACTTCTCTAGGCTACAAGCCAAATCAAACCATTCTTTTTAATTACAGGTGAATAATAACACCCTTAAATTTCTTACAAATAACGTCAGCCTCCTTTTGCTTTTTGACTGATGGAAGGTGATGAATGACGACCTTTTAATTCAGCACAGCTGGATGTCTTTTGTTGCACTTCCTCTCAAAAGTTGCTGTGCAGATCTGGCCTATTTTGTCAGATGTGCTGAAAACAACGTGCC chr4 - 94230402 39547959 39547958 39548215 54682188 54682187 54682444 257 TGGCAAAATTCATAACCTGGCAAAAGGAAAAATATTCACATAACTCTCGGCAAGAACCCAAATCAAACCATTCTTTTTAATTGCAGGTGAGTAATAGCACTCTTACATTTCATACAAATAACGTCAGCACTCTCCTGCGCGGTGATTGATGGGATGTTTTAAGTGGAGTGC-TTTAATTCAGCACAGCTGGACATCTCTTTTTGGATCCCCTCCTG-----TACTCAGAAAA------CTACTT--TTAGATGTATTGGCAAGAACTTGCC ...x.....................x-....::.....:.:xx....x...x.x..x.........................:.......:.....:...:....x.....x................x::..::...x:xx...:......:.x..xx.:.:..:x.xx.-....................::...:..x...x.:::....:::-----.:..xx.x.:.------...:..--.:......::..:x..x...x.... 26M1I144M1D44M5D11M6D6M2D25M 194/256 75.8% 257/94230402 0.0% 15/256 5.9% 84428255 NA +3119 chr4 + 190214555 124018466 124018465 124018532 67 CTTTCGTTTCTTACCTCTTCCCTTCCCTTTCCTTTTTTTCCCTTCCCTCTTTCCTTTCCATTTCCTT chr4 - 94230402 20485618 20485617 20485684 73744719 73744718 73744785 67 CTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCT .....xx::.:.:..:.x:...::......:.:::.....:...:..:......:..:.x...:.:. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 103532848 86681707 +18691 chr4 + 190214555 124018923 124018922 124019309 387 AGAGAGAAACTGGGAGGAACTGTGCTGTCAACAACAGGAAGTTGATGAAAAATGAAAGAAGCCCTTGGGGAGTGAAATGAAGAGCAGATGGCTTTAATTGTTAGCCTTGCTGTGACAACTGACAAGAGAAATTCTGCTCTCTTGACATTTAAAAGATACCAGAAATACCAGTGACCACATTCCATAGCTTCTTGAAGGTTTCCATGTCAAG---------------GAGTTCAAACTCCTCTCTATTTTCATTATTGAACAGTCCATAAAAACTGCAGGTGATAAGATCCCTGATGGGTTAGCACTCTAAGAGTTTGATAAGGCACTGA-------GTGCACGCAGTATAAGGGAGTGGGAAGTCACGGTG-AAGGGAGGCGCTTATGCAGGGAAGTTCTGAGTGATTTA chr4 - 94230402 39564471 39564470 39564876 54665527 54665526 54665932 406 AGAGTGATACAGGGAGGAACTGTGCTGTCAACAACAGGAAGTTGGTGAAAAATGAGCAGTGCCCCTGGGGAGGTGAATGCAGAGCAGATGGCTCTAATTGTGAGTCACACTGTGACAACTGACAAGAGAAATTCTGCACTCTTGACACTTTAAAGATACCAAAAATACCAGAGAGCGCATTCCATGGCTTCTTGAAGACTTCCATATCGAGGGAGCTGGGGGGGGAGAGCTCCAACTCCTC-CTGTTTCCATCACTAAACAGCCCATAAAATTTGCTGTTGATAAGCTTCCAAGCAGCCAAACATTCTAATACTTAGATAAGTCACTAACGTTAATAAAAACACTGAAGAAATAAGAAGGAAG---AGGTGAAAAGGGGATTCATGTGCAGGGCAGCACCAGTTGCTTTA ....x..x..x.................................:..........:x::x....:.......xx:....x.............:.......x..:.x::............................x.........:..x..........:.........x..x.:........:...........::......:..:..---------------...:..x........-..:...:...:.:.:.....:........x:...x.x.......x.:..x::::.x:x.:..:.....x.x..x......x....:.-------:x:x..:.x.x.x..:x:..x:.....---x....-..:..:.::x.x.:.......x..:x.:::x..x.... 211M15I15M1D87M7I27M3D5M1I38M 293/383 76.5% 406/94230402 0.0% 27/383 7.0% 84454452 NA +14618 chr4 + 190214555 124025438 124025437 124025825 388 GCATTCCTAAAGTTTAAAGTTAGTGACTATCAGGAAAGCAAATATTTCATGCAAGGGTAAGCCCTCTAATTGCGTTTGTGTTGAATGCTTGCCAGATCCGCATGTAGAGGGTTCCACAGGCGTATTTCTGATCTCACCTTCGCATCGGAGGCCACTTCAAAA-----GTGCCTGTGGGTGGAAGGAAAGAGGAGGAAAGTCAAAAAAGCACATGAGGAAAGACGAGAGGTAGAGGGAATGAGGCAAGAAAAGGAACAAGTGAAACCCTCTTGGGAAGGGAAGCTGTGTTTCATTTTAGTTGCTTCGTTTGGACGGAAGCCTATAAGAGATTGAATAACATAAGAAAACATACTGCCGCCCTCTCTT-----------CTCATTCTCTCTGAATGTATGTAGAAT chr4 - 94230402 39562819 39562818 39563172 54667231 54667230 54667584 354 GCATTCCTAGAGGTTAAGGCTGGTGACTATCAAGAAAGCAAATACTTCACGCAAGGGTAAGTCCTCTAATTGTGTTTGTGTTGAATAGCTGCCAGATCCCCATGTCAGGATGTCTGCAGTCACGGCTCTGATCTCACCATTCCTTCCTAGGCTGTTGCACAATTGTGTTGCGTGTTTGTGGTAGGGGAGA------------------------------------AAGTTGGAGAGCTGAGCTA--------------TGAAACCATCTCGGGGAAGGAAGCCATGTTTTATTTTAGTTGCTTGGTTTGGATAAAAGCCTGTAGGAGATTGAATAACATATAAAAACATAATGTGGCCCATTCATGGAAACCAAACCTGGTCTTCTGTGCAGATATGTGAAAT .........:..x....:.:.:..........:...........:....:...........:..........:.............:x:..........x.....x::.:xx..::...x.:::x:............x.:x.x..xx....:::.x..x..-----x...x...xx....x...::...------------------------------------.:..x.::.::x....x:.--------------.......x...:...:.:......::.....:.............x.......:::......:..:................x:........x..:x....x:..x.-----------..x:.::...x..x.x:.....::... 162M5I23M36D19M14D107M11I27M 252/338 74.6% 354/94230402 0.0% 66/338 19.5% 84462619 NA +10421 chr4 + 190214555 124030135 124030134 124030516 382 TTAACTGTCCAAACACTTAAGCCACTGGAAACTCTTCCTATTGGCAGA--CTCTGTTAAGCTTCCTGGCTGCATTATTTCACCCTCATT------TGCTTAGAGGACTCTCTCAGTGCCTA------------------------------------------TGTTCTATTCAGTCTTAGCACAGGAAGGCTGCAGGTGCTAGCCTTTTGCATCTTTTTTGTTTGTTTGTTTCATCCTCCATGGGGAATAGGCTAGAGAGAGCTAACTAATTAAAGAATTCCATTGGGGAATATCTGGAGCCAGCAGCTGTGAAACAGCAATCCAGCATTACACGTGCTCTCTCTCTGTCAGGGAAGGCCTAAAGGGTGTGGTGAGTGGCCACTTTTCCAGATGGTCTGCGTTCTGTGATGAGGCCATAGCTGTATGATGC chr4 - 94230402 39568644 39568643 39569056 54661347 54661346 54661759 413 TTAACTGTCTGGA-ATGTGAGCCACTGGAAATTCTTCCCCACAGAAGAATCCCCATTAAGCTTTCAAGCAGACTTACTTCATCCCCACAGCTGCATGGATAGAAGACTTTCT-AGTGCCTAAATACTTACTGTATATGTCATCCttaaatttaattttttttttttttttCCCAGCCAGAGCTCTAGGAG----CAGGTGCTAGCATTTTGCTTCCTTTCTGCTT-----------CCTCTGTGGGGAACGGGCTAGAAAGAGCCAACTAATTAGAAAATTCTACAGGGAAATCAATTCTGCAAACAGCTGAGGAATGGCATTTCAGTAT--AATGCTCACTTTGTCTGTCAGCAGGGCCTTGGTTGACTTGACAAGTGGCAGTTCTTCCAGATGTTACACATGTTGGGATAAGACCAGAACTGCATCGTAC .........:::.-.:x.:............:......:xx::.x...--.:.::........:.x:..x.xx...:....:..:..:x------..xx....:....:...-........------------------------------------------.x..:.x::...:.xx...x.x:.:..----...........x......x..:...:..:..-----------....::.......::.......:.....:.........:.:.....:.:x...:...xxx.xxx..x.:......x.:..::...x.:...:..--x.:.:x.x..:.x........x:::.x.:.::xx.::x..:::......x::.:.........x.x::.:.x:..x...:..:...x.:...:..x:.:. 13M1D34M2I39M6I17M1D8M42I27M4D31M11D94M2D100M 245/363 67.5% 413/94230402 0.0% 69/363 19.0% 84461491 NA +4010 chr4 + 190214555 124056379 124056378 124056497 119 TAAAATAGATA-CCATTATTACCTACATTTTACAGGTGAGGAAACTGAGGTATATGGAGATTCAGTAATTTGCCCAATATTAACCAGTAAGTGGTAGACCTGGGATTAAAACCCAGGCAT chr4 - 94230402 10729182 10729181 10729282 83501121 83501120 83501221 101 TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT-------------------CTGGGTACAGAATCCAGGTAT .:.::...:..-::.:...:.x..x.............:.:.........:.:..:x..:..x.............:x:.-------------------.....xx:.:..:.....:.. 11M1I68M19D21M 73/100 73.0% 101/94230402 0.0% 20/100 20.0% 113327197 76887358 +14167 chr4 + 190214555 124061284 124061283 124061717 434 GAAATTCTATCACAGATGAATATATTTACTTGACATATTGCATAAAATTATTTTTTTAAATAACTGTGGTTTAAGCCAATTTTTTTGAAGCAA-AATCTTTGGTTGTTCTTGGCATTTCTTAATTTGCTTACTTGGGGGTA----TTCTCCCCAAATCCACACATATAATTTTCATTGCCTCTAAAAGGGGT-TATGAACACACATCTGAAGGAGAATTGACCACTTGTTTTTTGATGTTTTAAAGCCAACTAAAGCATAAACCTCTTGTTTCCTTTCTGATCCCAGGCTTTTTCAATAAGAACAATGCTTATGCAAGATTTCCTAGGGGGATTTTGTGGTTTGAGGTTTTAATAATCTA---GGCTAAAATTCAAATAGGAACCACAGCTGCTTGGATAAGACTCTTAGACCTT-TTCATTTGAACTGTAGTGAACTTACCAG chr4 - 94230402 39584031 39584030 39584456 54645947 54645946 54646372 426 GAAATTGCACTGCAGATAGATGGATTTGCTTAACCTATAAAATAA-------TTCTGAGATAGCTATTGTTTTGGCAAAATTCTAAAATGTAACAAAGTTTGATTGTTCTTGGCTTCTCCTAATTTGCTTACTTTGGGGTAATAGCTGGCCTTCAAT--ATGCATGTTAGTCTCGTTACTGTTAAGTTAAATATATACACACATATCTAAGAGAGGTTTGACCATTTACTGTCAG-TGTTCCAAGGTTAGCTGAAGTCTGGACCTATTACTTTCTCTGTGCTCCA-------CTAATTGAGACCAAGGCTTATGCAAGACTTCCT-TGGGGATCACAGGGTCTGAGGTTTTTATAGTCCACAAGGCTAAAATTCAAATATGAACCACAGCTGTTTGGATGGAAGTCCTGGACCTCATCCTTTTGAACTATAGTGACCTGCTCAG ......x:.:::.....::..:x....:...:..x...x:x....-------..:.x.:...:..:.x....x:..x..x..:.xx:.x.:..-..xx....:...........x.:..:..............x......----:.xx..::x...--.::...:.x.x.:..:..:.:x:...:xx:::.-...:x.....:....:.::...:x.......:..::.x.:x.-....::..:.::.:..:...:x.::....x..::..:..:.x..x...x-------:.x.x.:...x...x............:.....-x......:x::x...:.........x...:..:.---................x............:......:::.x..:.:.....:-.:.x........:......x..xx:... 45M7D41M1I47M4I12M2D33M1I42M1D49M7D33M1D34M3I52M1I28M 289/416 69.5% 426/94230402 0.0% 28/416 6.7% 84477253 NA +14084 chr4 + 190214555 124089942 124089941 124090406 465 AAATGTATTGCAAGGACTCAG-ACCAAGCTTGAATTTTATTACCAGGCAGGGGGTTGACCACAGAAGTAGGCAAGCAGGGCATAGAGGTTGACTTCCATCTCTAAGGGTGGTTTTTGGTGTGTGTGTGTCT-GTGTGTGTTTTAATTTATTCGTTGCTCTTAAAAAAATGAAGAGAAAAAAAGGAGCTGAATAACTTCTGGTTGGCTGGATGCCGATATTATTTTTTTTGGCAAGAGCCGCTGAGTGGCTGAAAGGTGGCCATTAACACTCTGACAGAAAGTGCTGACAGGGTGATTATAAGATTAACACCCTATGTTATATTAAGAGTGTCAAAACCTCACTCTTACCTGTCAATGGAAAATAACAGCAGGCGTGGAAGCACTACAGATGCCAAACGATTTCTAATGTGGAAGCACCGTGC----ATTGGTGTGTCTAAACTTTTGTCAATGCCCGTATTAGCTACAGAA chr4 - 94230402 39587049 39587048 39587486 54642917 54642916 54643354 438 AAATACATTAAAAGGGCCCAGTGACAAAGTTGTTTTTTTTTTTTTGCCAGTGGGTGTGGAGAAGGAAAAGGAAATGAGTAAGTAGAG-----------------AGGAGCGTCTTTA-TGGCCACATGGCTAGTGAAAATTTCTATTTATTCTTTG-------------GGGAAAAAGCAAAGTAGCTGCATAGTTGCTGGTTGGATAGGTGCCGGGACTATTTTTATTGGCAGGCAGCTCTGAGTGGCTGAAAGGCGGTCATTAACACTCTGACACAAAGTGCTGACAGGGCGATTATAAGATTAACACCCTATGTTATATTAACAGTGTCAAAACCTC-CCCGTACCTGTCAGTGAGAAATAATGGCACGAAGGAAAACATTATAGACATGCTGAGACTT-TAGCATTGAAATACCATGCAGCTATTCACTTTTTGAAATTGATCTAAATATCTAGATGACCTACTGAA ....::...:x....:.:...-:x...:x...xx....x..x::x.x...x....xx:xx:x..:.:x...x..xx..x:x:.....-----------------...:xx..:...:-..xx::::..x..-...x:x:...:x........x...-------------.:::.:..:x....x.....x...::.x........x.:.:.....:x.:.......x......:.x:x.x................:..:................x...............:................................x..............-.:.x.........:..::......::...x.x:x.:..:..:..:...:::xxx:x..:..-..:::.x...::...:...----...x::x.x.:x...:.xx.x.x...::.::x..x.x....x... 21M1I65M17D13M1D13M1I24M13D171M1D61M1D19M4I45M 298/432 69.0% 438/94230402 0.0% 39/432 9.0% 84502893 NA +3000 chr4 + 190214555 124103993 124103992 124104052 60 TTAAAATTTTCCTATAATGTTGTTATTATTATTATTATTATTATTATTATTATTTTATTA chr4 - 94230402 19960277 19960276 19960336 74270067 74270066 74270126 60 TTAAAAATTCTATATAGTCTTCTGAATATTATTTTTGCTATTATTACTATCACTTTATTA ......x..::x....:.x..x.x.x.......x..::........:...:.:....... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 104143716 86070839 +17358 chr4 + 190214555 124121429 124121428 124121813 385 CCATTTTGAACTCAACAAA---TGCCAGTTTTTA-GAGCTATTTAATGAAGGAAACAAGTTCAAACTTTATTTCCCCCTTTAATGCAATCAGAGGTTATGTTTGTTTAGAAAGCTAACATCTATCCAGATTATACACGCTCACCAGTGTCAGGCCAAAAAACACAGGCCCAAAACCACTCATTCCATAACTCCCTCATTTTCTGACCTATGGCTGTTATTGTAGGAATTGAATCTATCAAGAAGTTGCCTCTGGTACAGTCAGAGAATATCATGGCACCTTGTGCAATAATTTGCAAAC---TGGTTTGAGAGAAGTTGTATGAAAAAAATACATTCCAAACCTTGACCTCCCTACATTGTCACAGAGAATGTTTGGCTGGGCTTAGTTCCA chr4 - 94230402 39591818 39591817 39592209 54638194 54638193 54638585 392 CTGTTTAGAACAAAACAAGCATTGAAAGTTTTGAAGGGTTGCTTAATGGAGAGAACAAGTTTCAACTTTATTCCCTACTTTCATGCAATCAGAGGTTATGTTTATTTAGAAAGCTAACATTTATACAGATTATGCACTTTCAGTGCTTCCATGCCAAAAAACACATGACTAAAATGGGTCTTTCCATCACTCTTTCAGTTTTTGACCTATGATTGTTTTTACAGGAACTGGATCTTTTAAGCAATAGCCTCTGGTAGAGTAAGGGGAAAGCACAGCACCTTGTGCAATAATTTGCAAAAAAGTGGTTTAAGCAAAATGTTTTAAGCAAAATGCATTTGAATCACTCAGCTTTCCAGACTACCCCAAACACTGTTTGATTAGGATAATTGCCA .::...x....xx.....:---..xx......x.-.:.:.::......:..::........:x.........:..:x....x.....................:................:...x........:...x:...x::x.x:..x.............x.x.:....:x:x..x......x....::...x...:.........::....x..::.....:..:....x.:...x.:.x..........x...x..:.:.x.x..::........................x---......:..x:..:.xx.x.:.:x.....:....:x..x.x:.x.x..::.:.x.:.::.x..:.x.x......::.:..x.x.x.x... 19M3I12M1I264M3I90M 280/385 72.7% 392/94230402 0.0% 7/385 1.8% 84529611 NA +3080 chr4 + 190214555 124139659 124139658 124139728 70 CAAGTAGTTTTCAAATTAATTTCTGAAAAAAAAATATAAGTATTATATATATAAATATATATTATATTGT chr4 - 94230402 85221812 85221811 85221881 9008522 9008521 9008591 70 CAAGCATCCTTAAAGTGAACCTTACTAATAAAGAAATAAGTACTATATATATATATATATATTCTACTGT ....:.x::..x..:.x..::.:xxx..x...:.x.......:..........x.........x..:... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 38917847 NA +3594 chr4 + 190214555 124142275 124142274 124142392 118 ATTGGAAAAAATGAGAAAGTCTGTTTATGCGAGAATAAGGGTTTGGCCAAGTGTATTAGGGTTCC---------------CTAGACGGACAGAACTAATAAGACATGTGTGTGTGTATATATATATATATATA chr4 - 94230402 52579678 52579677 52579804 41650599 41650598 41650725 127 ATGGGACAAATGGAAGAAGTGTGTCTCAGCCAAGACAAGTGCT------GATGGATTATGGCTACATCAAAAGAAGAAAACTGCATTGAAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATA ..x...x...xx..::....x...:.xx..x.::.:...x.:.------::..x....x..:.x.---------------..:x.:x..x.x....x......:.:..........:................ 43M6D16M15I53M 80/112 71.4% 127/94230402 0.0% 21/112 18.8% 71562597 NA +16537 chr4 + 190214555 124144300 124144299 124144686 387 CCATACTA--AATCATCAACACTTCACTGCACACCATTGCCAG----GAGAGAAGAAAACATCCTTCTCTTTCATTTTTTCTTCCTTTAAATGGCCAAACATGCTGTCTTTGGATTGAGTTCAATCCTGCTTTAATTCATTAAAAA-GTGAAACAAAATCACCATTTACATCCTTGACAGCTGGCAGGTTTTATGTGTTCTTACTACCCCTGCCAAGT------------AGCAAAGG---TTTCATTCAATTCAGTCACGGATCCTTGGAGAGCTCCGAGTGTGGAGCCCAACAAAACACAGTGGTAACAATGACACAGAA-ACCTGCGGGCATGGG-GTATTATGCCAATGCACCGGTGTGTAGGAAGTCATAACTTTCAAAAACTTC--------AAAAAGAAACTACAACAAAAG chr4 - 94230402 39597410 39597409 39597810 54632593 54632592 54632993 401 CCGTGCTACCAAGAATAAACACTGTATTGAGCAGAAGTGCCAAAAGAGAGAGAAAAAAAAATC------------TCTGTCTTTCCTTGCAAGGCCAAACATGCTGTCTTTGGACAGATTTCAGTCCTGCTTTAATTCATTAAAAAAGTGAAACAAAATCACCATTTACATCCTTGACAGCTGGCAGGTTTTATGTGTTCTTACTGCTTCTGCCAAGTCAAGGAAAAAAAAAAAAAGGAGTTTTCATTCAGCTCTGTCATGGATCTTCGGAGTGCT-GGAGTGTGAGAGATGTCAAAATGTATTCATAACAATGACATACAGTACCTGAAGGCAGGAACGTATTATGCTAATGTATTGGTGTAAAGGAAGTTACAATTCTC-----CTTTTTCCTTaaaaaaagaaaaaaaaagaaaag ..:.:...--..xx..x......x:.:..x:..xx.x.....:----.......:....x...------------.:.x....:.:..:x.x......................:x..x....:......................-..........................................................:.::.........------------.:x.....---.........::..x....:.....:.:....x...-x.......:::xx::x.....:::.x.x:...........:.x.:-.....x:....x.::-.........:....:.::.....:x.......:.:..:.:..-----...:--------.........xx.x..x..... 8M2I33M4I16M12D71M1I71M12I8M3I35M1D45M1I15M1I42M5D4M8I21M 292/369 79.1% 401/94230402 0.0% 50/369 13.6% 84546890 NA +14495 chr4 + 190214555 124145914 124145913 124146426 513 ACAACATCCCTGCCGTTACCAAAGACATCTAAAAGGGATCCACAGCCACTTTCATAATTGA-GTCTCAATCCAGCCCAGTAGTATTGCCAGATTAATATGGTTGGCTTTATTAAATTAAGAAACAGCTT-TATACATAAGAAACTATCCACCAATCTTCACTATATTATTAAAAAATAGTTGTTTTGTCAATCATAGATTATTTCTATTACTTGACTGGGGCAGTTTCATGTAGTTTTGATTAGTTATTTTTATATGCCTGTTATTTTATGATC-TTTACTTCTTATCTCTTATAGGAGAAATGTCTCAGAGCTGCAAC-TACAGCCCAGAAATAGAACTACTTTTGGCTCTGAAAC--AAAAAACCAGAGGCACTGGACTTTTCCGGCAAAATGTTATCAGTATGGCATGTATTTAGCCTTTGGTTATTTCATTTATTAAGCTAGGAAGTTCTTAAAAACAACAATTGCT-TTGAGAAAATCATGTTATTGCTTTTTGCCTGTGCAAGATACTATTTGC chr4 - 94230402 39598940 39598939 39599451 54630952 54630951 54631463 512 ATACCATCGTTGTCATTTTCAGAGGCATTTGGGAGGGAGTTGTTGCAGATTTCAGGACTGAAGCCTCACTCAGGA--AGCACAGATGCCAGATCATTATTCCTGGCTTTGAAAAA--AGAGAACTGCTTATGGGCAGAGGTGA-TATTTACTG-CCTGCAGTACATT-TCACATAGCAGCTATCTTGTCAATCATATATTCTTTATATTACTTGACTGGGTCATTTTAATTTTGCTGTGGATATTTACTTTAAAATCAATTTTATTCTGTGATCAGCAACCCCGTATCTATTGTGGTGAGAATAGCTTGGGGTTGCAACTTAAAGACCACAAATACGACTAGTCTTGGCTCTGAAACTTTGAGACCCATAAGCA-GAGTCTTTTCTTACAAAATGCAATCATTATGGCATTCATATAGCCCTAAGCAATTTCACTTATTAAGCCAATAACTGCTTAAAATGGCAAGCTGCTCTTGGAAAAATCAACTTACTGCTTTATGCCTATACAAGATCCCTTTTGC .:.x....x:..:.:..x:..:..:...:.:::.....x::::x..x:x.....x:.:...-.:....x..x:.x--..:.xx:x........:.x...xx:.......:xx...--.:::...x....-.:x:..x.:.x:.-...::..::-:..x..x..:...-.:.x.x.::..:.:.:............x...x...x...............x..x...x..x.x.:.x..:x..x...:...x.x..xxx.x.....:.:.....-x:x..::.x.....x..:.:.x:::...:x..::.:.:......-..x..x...x.....x:....x.:.............--x:.:.x...x.:...-x:.x......:x:.......:x....x........x:..x.....:.x:.:x......:.........:.:x..x.x.......xx:xx.::....-...::.......xx...:......x.....:.:......x.:x..... 61M1I13M2D38M2D12M1I13M1D9M1D13M1D106M1I44M1I37M2I15M1D96M1I48M 339/505 67.1% 512/94230402 0.0% 15/505 3.0% 84546974 NA +3023 chr4 + 190214555 124148224 124148223 124148295 72 CCTTCCTTCCCTCTTTCTTTCCTTCCACCTTCCCTCCCTCCCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 83554911 83554910 83554982 10675421 10675420 10675492 72 CCTACCTTGACTCATACTCATTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCCC ...x....xx...x.x..:x::.:::x:.::....x......:.:......:......:..::....:.:.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 40593313 NA +3412 chr4 + 190214555 124155049 124155048 124155115 67 ATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAACATTAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 49177699 49177698 49177765 45052638 45052637 45052704 67 ATATATTCTGAAACTGCTCATATGATTAAAAAAAAAAAACATCTGGGAAAAAAGAAAGAAAAAAAAA ..:..::..:.....xxxx:...:..x...............:x:::......:...:......... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 74977350 NA +3422 chr4 + 190214555 124163483 124163482 124163715 233 TACTCCATTGAAGATTATGTTCAAAAGGCTATTAATACATGTTCATTAAAATTATTTCCCCTGGGTTA-----TGTTGGTAACATAATGTAAAACATACAGGGATTCCTGTCACAACTAATGCGTTAATTAAGAAATAAATGTACTTTTATGACTTATGCCTTTTTGAGTTAATTAGATAGTAAATCATTCCCTAA---TGAGTGATTCTTAGAGTGTAGTAGCTATCAGATTAAATTAAA chr4 - 94230402 39610341 39610340 39610560 54619843 54619842 54620062 220 TGCTTAACTTAACATGACATTGGGAAAGGTATTGATTCACTTACATCGAATTAACT-------GGTTAGACATTGCTATTAAC------CAAGCC---CAGCAATTCCCATCAAACCTAATGTGTTAATAATGGCATAATTACACACTCCCGGTCTATGCAATTTCAAATTAGTTAGAGCACAAG-----CTCTAACAGTGCATGACACTTTGTGCACAGCAGCCACCACACTGCATCCAA .:..:x.:.x..x..x.::..x::..:.x....:..x..:x.x...::..x.x.:.-------.....-----..:.:x....------:..:x.---...x:.....::...x.x......:......x.x.:x....x.::..x:.:x:.:::.....xx...::.:...:.....xx::..:-----.:....---..x:...:x...x.x.:::..:...:.:..x.:.:x..:x.. 56M7D5M5I10M6D6M3D87M5D6M3I42M 130/212 61.3% 220/94230402 0.0% 29/212 13.7% 84553142 NA +17165 chr4 + 190214555 124179228 124179227 124179828 601 AGGTGATAACCCAAGTGACATATTCAAAGATGTGACAAGCATGATAAAT-ACACCTTCTTGGAAACTGGATCCAGAAAGCTATGTGTCCA-GGGGTGGC-TCCTGCCTGTCTCTAAC------ACCTGTTCCCCTT---ACACCTATAAATGGTCAATGTTAATCAGTAGTGGTTACTTTTGGTGATGTTTCTTCAATCCCCAACCCAAGCCACCTTCATCTCCCAAATGACATTAGGTCCATGGCATACATGATAATCACTGGA-ATTCAAAGGTGGCATCAAAATTGGGAGATCT-------GCATCCTCTCATCCTTGCCAAGGCAATCACATTAATTCTGCTAACAGCTTGGTAAGTCAGCCAGCCTAGTAAACACTCCTGTCTTAGAAGGGAAATCCAGACATTCGTGTTGGTTCCTACTGTTTCTCCCCCTCTGTGTGATCTTGAGAATCTTGCCAAGGGGGCTGATGGCTGTCATCTGATGATGCCATGTGAAGGCTTTAATGAACTGGCATTTCCTGTTGCTGAGCTGCCATGTCTGAAGGCCAAAGCAAACAGGGTTTAGGCTCTTTGGATCCCA---AACTGTTTTTGTCTCTTTCTCTTCCTACTTCTGATCC chr4 - 94230402 39613118 39613117 39613714 54616689 54616688 54617285 597 AGATAATA--CAAAGCAGCGCTCTCACAACTGGAGCATGGATGAAAAATGACACAGTCCAGGAACATGAA------AAGTAACAGGCCTGTGGGGTGAAGTCCCAACTGGCTTTAACTGGAAAGCTTGTTTTCTCTTGAATACACAT---TTGCCAGCTTCAAATGGCACTTACTATTTTTGGTAAAGTTGTTACAAGCCCTCACACATGCTTCGTCCA-----------GCACCATTTTGATGGTATA--TGATAATCATTGGGTATTAAATGCTGGCAGCAGAGCCAGAAGGTTTCCTTCATGTATCCTCCTACCACTGCCAAGGCAATCAAATTAATTCTGTTAACAGCCTGCCAAGTCAACTAGCCCACTAAAATATCCCGTCTTAAAAATGAAATCGAGACATTCATATCAAATCCTGCCGTTTCCTTACCGAGG-GTGATTGCTGGACCCTGGCCAGCGGGAATGACTGCTATCATCATATGATGCCATGCGATGGCTCTAATGAGCTGACATTTCCTGTTGCTAAATTGCCATGTCTGGAAGCCAAACCAAATAGTGTTCAACCTCTTTGGAAACCGGATGATGGTTTCTGACTTTTCCTTTTGC--CTTCTGTTTC ..:.:...--.x...:::.::x:...x.:x..x::..x.x....x....-....xx..:x....xx..:.------...:x.::x.:.::-......:x-...::x...x..:....------:.:....::.::.---.:..x:..---.x.:..::x.:..x::.:.x.x::..:.......:.x...x:.x...x...:x..x..x..:x.x.:..-----------:..::.xx.:x....:...--.........:...:-...x..x.x.....x..:.::::.:..:.:.-------.:......::.:.x:..............x..........:.......:..x:......:.:....:.x....xxx...:......:..:x......x........:.:.:::x....:.:.....:::x..xxx.-.....:x:x:..x:..x....:x...:x...:x...:.....xx...........:..x....:......:...:..............:.::...........:.:......x....:..x...:.:x.........xx..:---:.:x....:..x..:..:..:..x.--......x.:. 8M2D39M1I20M6D14M1I8M1I17M6I13M3I8M3D69M11D19M2D14M1I31M7I136M1D143M3I25M2D10M 388/574 67.6% 597/94230402 0.0% 50/574 8.7% 84566110 NA +5844 chr4 + 190214555 124199899 124199898 124200206 308 CTTGGCCTTC--CTAAAGTGTTGTCTTGACCTAAAGTACATCCTGTGACTCATATTCCAATTACTGTTATAGTTTTTCTGGCCCAAATTGCCAGGAGGAAAGGAAGTACTTCTATACTTACGGT----GATTAAATGCCCTTAGTATACACAATCTTGTAAAAGCTGCACCCTGAAAAACATACAGTGTTTTATATTTCTTTGTACCTG-TTACACTTTTATGAATTCTTCTTGGAGTAAAAGTACATTC-TGTCACTATCTGAAAAAAGGATCTAAGTTACAGTAACATTACCAGTGTTGAAAAATGTCTTATTT chr4 - 94230402 39623961 39623960 39624243 54606160 54606159 54606442 283 CTTGGCCTTCTACCACGATGATGTCTC-ACCTAAAATATAGCCAGTGACTCATCCTGCAATTATTGCTGCTGTCATTCTGGTCCAAATTGCTTGGAGGAAGGGAAGTGCTGATAGAGACACAGTAGAAGATTAAAATAAGTATGTCTGTGATGCTTTACAAAAGCTTTGCTGTAAGGAAC---------------CTTCTTTCCTCATGATTACTTTATTTTGAATTCATTGTG------CAACACATTCTTGTC----TCTGGAAACAGGAAT-------CAGGAGAATCATTAGAGACGGAGAATATTTTCCTT ..........--.:.x::..x.....:-.......:..:.x..x.........x:.x......:..:.::x..:x......:.........:x.......:......:..xx..x.xx:..:..----.......xxxxx.xx..x.:::xx:::..::.......x::.:x.:.::...---------------:......x:x.x..-....x:.x..x.......x.:x..------x.::......-....----....:...x....x:-------...x.:x..:.::..x.x:.:.:...:.:..x:.. 10M2I15M1D96M4I52M15D14M1I24M6D10M1I4M4D15M7D35M 183/275 66.5% 283/94230402 0.0% 41/275 14.9% 84575938 NA +3127 chr4 + 190214555 124206783 124206782 124206846 64 TCAAAAAAAAAAAAAAAAAAAAAACCAACCAAAAAAAAAAAAAAATAAGAAGGAAGGAGTGATC chr4 - 94230402 68654341 68654340 68654404 25575999 25575998 25576062 64 TTAAAAAAGAAAAACAAAACAAAACCAACCAACAAACAAACAAACCAAAAACCAGAAAGTGGCC .:......:.....x....x............x...x...x...x:..:..xx.:::....::. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 55552442 NA +3041 chr4 + 190214555 124239298 124239297 124239355 58 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATCATCAACCTAAGAGTTAGGCAG chr4 - 94230402 72065812 72065811 72065869 22164534 22164533 22164591 58 TCTCATACACAGGAAAAAAAGGAAAAAAAAAAAGATTCTCAAGTTAAGAGCAAGTCAG .....x.x.x.::.......::..............:x....x:......:x..x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 52173486 NA +5768 chr4 + 190214555 124262883 124262882 124263167 285 TTTCTTTCCTTCTCTTATTCCTTTCTTCCTCCTTCTTTCTGCCCTGCTTCCCCTTTCCTCCCTCTTTCTCT----CTTTCTTTTCCC--------------------------TTTCCTTCCTTC-----CTTTCCTTCCTTCCTTCCCTCCTCTTTCTCTTT-------TCCTTCCCTTTATTCTTTCTTTCCCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCCT----------------TCCTTTCTTTCTCTTTCTTCTTTCTTTCTTCTTTCCTTTCTTCCTT----TCTTCCTCTGTA chr4 - 94230402 78380933 78380932 78381276 15849127 15849126 15849470 344 TTTCCTTGGATTTCATATCCTTTGCTACATCTTTTTCTCTAGATGGCT---CTTTTTCTCTCTCCTTTTCTGCAACTGACTTTGACTCAATGGTGGTAACAATTGTCTTGGATTTTTCTTCCTTCGAAGCTTTTTCTTCTTTCTTGGCCTTCTCCTTCTCTTTGTCAGACTTCGGTGTTTTCTCCTTAATCTCTCTTGGTTTATCATCTTTGTTTGCCCGTTCTTCCTTTGGTTTATCTTTCCCATCCTTCCCAAGTGCCTTCGTCTCTGGAGTGGTAGCTGGAATCTtttctttcttttctttatctttttccttcccgcttttttctttatcatctttctctttA ....:..xxx.:..x...:.:..x..x.x..:..:.:...:xx:x...---.:...:...:...:..:...----..xx....xx.:--------------------------...:........-----:...:....:...:.xx...:...:........-------.:.xx:x:...x.:...xx.:..:...xx...x..x.::..x:..x::.x......:..:xx.:.x.....::.x.:....::xxx.x.:...x.::..----------------..:.........:..::..x.:.:....:.::::x....:...:..----....:....x.. 48M3D20M4I12M26I12M5I33M7I99M16I46M4I12M 183/282 64.9% 344/94230402 0.0% 65/282 23.0% 45881950 NA +3077 chr4 + 190214555 124263024 124263023 124263092 69 TCTTTCTTTCCCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTCT chr4 - 94230402 90844564 90844563 90844632 3385771 3385770 3385839 69 TCTTGCTTTCAGTTTCTTTCTCAGTGTTTTCTTTTCTTCCCTCTTTCTGTTTTGTCCACTCTATCTCCT ....x.....xx..........xx.x...::.......:.:.......x.:..x:::x:...x...:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 33418460 NA +3443 chr4 + 190214555 124263037 124263036 124263162 126 TTCTTTCTCTTTCTTTCTTTTTCTTTCTTCTTTCTTT---CTTTCTTTTTCT-----------TTCTTCTTTCTTTCTTTCTTTCCTTCCTTTCTTTCTCTTTCTTCTTT-CTTTCTTCTTTCCTTTCTTCCTTTCTTCCT chr4 - 94230402 4165275 4165274 4165415 90064988 90064987 90065128 141 TTCATTTTCCTTCTTTTCTTCCACTTCTTCACTTATTAAATATTTTTTATCTCAACCCACATGTTTTCTTTACTGCCTTTTTAAACTTTATTTGTTTCCTTAACTTTTTTGCTCTCTTCTTCCCCTTTTTCCTTGTCTCCT ...x..:..:......::..::x:......x:.:x..---:x..:...x...-----------..:.::..x..x:....:.xxx...:x...x....::.xx...:...-..:.......:..:..:......x::.... 37M3I12M11I47M1I30M 84/126 66.7% 141/94230402 0.0% 15/126 11.9% 120097762 70116793 +3108 chr4 + 190214555 124263073 124263072 124263155 83 TCTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCCTTCCTTTCTTTCTCTTTCTTCTTTCTTTCTTCTTTCCTTTCTTCCTT chr4 - 94230402 69007395 69007394 69007477 25222926 25222925 25223008 83 TCCATTCTTTTCAATCTTCTTTTTTTCATCCTTTCCTAAGTCTTTTTGGTGTGTTTCTTCTTTTCTCTTTTCCTGTTCTCATT ..:x.::.....xx........:....x.:.......xxx.:.:...xx:x.x:.....::.....::......x.::..x.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 55255678 NA +3295 chr4 + 190214555 124275039 124275038 124275110 72 CTGCAAGCTCCACCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTATAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:x.:xx.x..:.........x.:xx...x.xx.x........:............:....:.x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 106077913 84136642 +3066 chr4 + 190214555 124310498 124310497 124310552 55 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATGTATGTATATGTAATGTTA chr4 - 94230402 7002321 7002320 7002375 87228028 87228027 87228082 55 GTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATGATGTATTA .........xx...........x.x.....:....x.:...:.....xx:.:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 117308177 72906378 +7726 chr4 + 190214555 124314450 124314449 124314740 291 CTTGTCATCACGTTACATGTCTTAAAGAAATTCTGAGAGGTTTCTGTGTGATTCTAAGGTTACC-TGTAAAATGGGAAATCTATAATTATATGCTTTGCAGTCAGCTGCTTCCTTCAGGCAACCACCTTGCATTAAATCTGCCATTAAAATAAATTTAAAAAGTCTCCCCAGGGATTGTTTTGCTCTCGTAAACTACTAATCTGCTAAATATGTAATTGAATTATTCTGTCATCTTAGCACCAACT-TCACTTTTAAATAAAAACTCCTTGTAAATAAGAGGACAAGCCATAG chr4 - 94230402 39664034 39664033 39664312 54566091 54566090 54566369 279 CTTTCCATCATATTTTGTATCATGGAGGAATTCTGACAGGTTTATGTGTGACAC--AGGTTACCCTATATAGTGGAAAGCCTGTAATTAGAAGCTGCACAATCAGCTACCTCCCACTGGCAACCATTCTGCCTTAAATCTGCCATTGCACTTAATCAAGAAAATGCCTGCAGGGAGGCCAGTGCCTCCACAAGCCATGAACCTATCATCTGTGGGAT------------TTACCGTGACATGTACTGCCACCCCTGCAAAGGACCTGCCCTGAAATACAAGGGAAGGCCACAG ...x:.....::..x::.:..x.::..:........x......x.......:x.--........-.:..x.:...:..::..:......x.x...x::..:......:.:...:x.x........:::...x..............:x.x.x...:x.:...:.x:.:x......xxx:xx...:::.::..:.:.:x..:..:::.xx.:..x:..------------.:.:.x.::..:xx...-:...:::.:x.x.::.x..x.::xx.....x:...:x.:....:.. 54M2D8M1I152M12D17M1I46M 174/277 62.8% 279/94230402 0.0% 16/277 5.8% 84650416 NA +7561 chr4 + 190214555 124386105 124386104 124386459 355 GTGGATGGTAGAACCCCAGAG---ATCTTTCTGAATAAGAAATCTAAGTTTGAATGTTCAGTATCTATCAGAAAAGAG------CTACAT-CTCCAAAATTCTTCCACTCTGGTCTC---CTTTACTGAAGTTTCACTTTTCCATACAATCTTTCCATACAATCTTGGTAGCTTGATGGTTTAAAAGCCTTAAATGGTTACATTTACTGTTGTTTCTGGTTGTCGTCAAGGTTACAGAAACAGCAACTACTGCAGGCAATTAAA-----CTGACTTCATAACCTGCCTTAGCTACAAGACTGAAGTTCCAATTTTCCAGTTGTACTTGGATCTGAAATTTGGCTTCAC-ATGAGTTCAG-TCTGTCCCGGGACAA chr4 - 94230402 39678728 39678727 39679082 54551321 54551320 54551675 355 GTGTGTGGCAGAAC----GAACTAATCTCCTCAAACGAGAAACCTGAGCTTTA--GGCCAGCTCTCCCCAGCAACAAGAGGTGGCTGCTTTCTCCATAGCTGTTGAGGTCTGACTTCTCCCTCCACCGAAGC--CCTCATACTGTATGACTTTAACATACAGGATAATTGGCTC-------CCAGACCTCTAAGTGGAATAATTTATTGTTGTTGGGAATAGTTGTCATGGTTACAGA-----TAACTACAGCACGCAATTAAATACAACTGACTTCATAACACCGCCTGGCTGCCAGACAGAAGTTCTGGGCTTTCAGTTTTGCTTGGATCTGAAATTTGGCTTCAAGATCATCTTAGACCAGTCCCGGGACAA ...x:...:.....----..:---....:::::..::.....:..:..:..x.--.x:...:x:::x:...x..x:..------..:.x.-.....x.::.x..xx:x....:::..---..::..:....:--.x::x.x.::..::.::..xx......:xx.x:x.:...:-------:x.:.x.::...:...xxxx.....:.......xxx::.x..:....x.........-----:......x...x.........-----.............x:xx.:.:...:.x....x.......:::x:..:.....x.:.......................x-..x.x:.:..-:.x............ 14M4D3M3I29M2D23M6I6M1I26M3I12M2D40M7D57M5D21M5I79M1I10M1I15M 223/335 66.6% 355/94230402 0.0% 40/335 11.9% 84707377 NA +3300 chr4 + 190214555 124408367 124408366 124408471 105 TAAGTAAGAAAACCATGCAGTGTTTCTCCTCTAAGCAAAGTTTAGTAGTTTAACAAACTTTTCTT----TTTTTTTTTCTAAAAG----GTAGATTATGCA-----TACATTTTTTCT chr4 - 94230402 61246531 61246530 61246648 32983755 32983754 32983872 118 TAAAAAACAAAACTGTGCCTTGTGGTTTATTTTATAGTAGTTTAGTATTTTAACAAACTTTTCTTTTTGTTTGTTTTCCTGAATGTGTTATAGCTTATTCAGTTGTTATACTTTTTCT ...:x..x.....::...xx...xx:.:x.:.x.xx:x.........x.................----...x....:..:..x.----:...x....x..-----..:.:....... 65M4I16M4I12M5I12M 77/105 73.3% 118/94230402 0.0% 13/105 12.4% 63161836 NA +3176 chr4 + 190214555 124429627 124429626 124429688 62 TGCTCAAACATGTAACTGTATACATACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x:.........x:.::...::..::.x:...:xx.:.................x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 116033826 74180729 +3017 chr4 + 190214555 124429657 124429656 124429727 71 CACACACACACACACACACACACACACACACACACATCCAATTTTTATGTCCCTTCTTATGGCTGTCTTCT chr4 - 94230402 87888278 87888277 87888348 6342055 6342054 6342125 71 CATATTCACACATACCCACTCACACACACATGCATATCAGATTTGGAGGCCTTTTCAAATAGCTTGCTTCT ..:.:x......:..x...x..........::..:...x:....xx.x.:.::...xx..:...xx..... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 36541379 NA +3242 chr4 + 190214555 124429756 124429755 124429833 78 TGTTTATCCTTTCTCTTAACTACCAAAACTTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTAATGCAACACCTTTTAA chr4 - 94230402 41328310 41328309 41328387 52902016 52902015 52902093 78 TACTTTTCCTGTTGTTTAGCCATCTTAGTTTCCTTCTTCTTCTTTTTATTTTTTTTTCTGCAAGGTGATCTCTTTTGA .::..x....x.:x:...:.:.:.xx.::...............:..x.........:.x:..x.::.:x:.....:. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 83101446 NA +3789 chr4 + 190214555 124470312 124470311 124470453 142 TTCTCTCTTCTTTCTTTTTTCTTTC---TTTCTTCTCTTTTCCTTTCTTCC-----TTTCTTTGGCTA------CTATACTACTTCTTTCTTTCTCTCTTCCTTCCTTCCTTCTTTCCCTCCTTCCTTCTTTCTTTCCTTCTTTATCCTCTCCCTT chr4 - 94230402 9693685 9693684 9693835 84536568 84536567 84536718 151 TTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTC-----CCTTTCCCTT ..:.x:......xx.:.:...:.:.---.::.....x...x:......:::-----:...xx:x....------...:.:x.......:..:..:..:.:....::...:.:x:....:x::..:x..x...:....:...-----...:...... 25M3I23M5I12M6I67M5D10M 91/137 66.4% 151/94230402 0.0% 19/137 13.9% 114776627 75437928 +3493 chr4 + 190214555 124470353 124470352 124470564 212 TTCTTCCTTTCTTTGGCTACTATACTACTTCTTTCTTTCTCTCTTCCTTCCTTCCTTCTTTCCCTCCTTCCTTCTTTCTTTCCTTCTTTATCCTCTCCCTTCCCTTCCTCCTTCCCTCCCCCTTCCTTCCATCCTTCCTTCCT-TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTACCTTCCTTCCTTCCTT chr4 - 94230402 91731746 91731745 91731944 2498459 2498458 2498657 199 TTTCTCATTTCTTT----------CTGCTT--TGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCGC--ACCCGCCTCACCCCCCTCACTCACTGCTT ..::..x.......----------..:...--.x.....::..::........:..:.:..:xxxxx.::....:x.:.:....:.:.....::xx.x:..x::x::.:..x..:.::x.x...x..x.....x::x..:..:-.:x....:.:..:.x.::...xx.x.x.:.x.:..:x.--...:x...:x.:x..:..x:..x:.x... 14M10D6M2D111M1I38M2D29M 116/198 58.6% 199/94230402 0.0% 15/198 7.6% 32738607 NA +3275 chr4 + 190214555 124470426 124470425 124470514 89 CTTTCTTTCCTTCTTTATCCTCTCCCTTCCCTTCCTCCTTCCCTCCCCCTTCCTTCCATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 18501284 18501283 18501372 75729031 75729030 75729119 89 CTCCCTTTGCCTTTCCATCCCCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCC ..::....x.:.:.::....:.:...::...:....::..::::.......:x:......:x:xx..:..::..x..x:x::..:.... 89M 53/89 59.6% 89/94230402 0.0% 0/89 0.0% 105969142 84245413 +3195 chr4 + 190214555 124470511 124470510 124470683 173 TTCCTTCCTTCCTTCCTTCCT--TCCTACCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCTTTCCTTCCCTTCCTTCCCTCCCTCCCTCCATCTCTCCCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCT-----TTCTTTTTCTTTCTTTTTCTTCTTTTTTTTCTTT chr4 - 94230402 45185586 45185585 45185750 49044653 49044652 49044817 165 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTT-CATTCTTTCTTTTCTTTCATTTTTC---ACCTTTCTTCTTTCTTTAACTC-----------TTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..:x:..:.:::......--..::.x:..:..x.:.-.x...:...:..:...:.x.:....---x....:....::..::.xx...-----------...:......:x...xx.x::...:x..x::.x.......-----::.:.xx...:.:x..:.:....:...xx..... 21M2I16M1D25M3D22M11D40M5I34M 101/158 63.9% 165/94230402 0.0% 22/158 13.9% 79284925 NA +3524 chr4 + 190214555 124470545 124470544 124470645 101 CCTACCTTCCTTCCTTCCTTCCTTCTTTCCTTCCCTTCCTTCCCTCCCTCCCTCCATCTCTCCCTTTCTCTTTCT--TTCTTTCTT-TCTCTTTCTTTCTTTCT chr4 - 94230402 78374919 78374918 78375022 15855381 15855380 15855484 104 CCAACCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTT ..x...:.::...x...:.....x:::.::.:.:...:....:...:...:..xx....:......xx::.x..:--x........-..:x:....:...:.:. 75M2I9M1I17M 67/101 66.3% 104/94230402 0.0% 3/101 3.0% 46095626 NA +3367 chr4 + 190214555 124470596 124470595 124470681 86 CTCCATCTCTCCCTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT--TTCTTCTTTTTTTTCT chr4 - 94230402 18988809 18988808 18988896 75241507 75241506 75241594 88 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..:...:x::..:.x.x.:..x......:.xx.:..x...:..........:....:.:.....x...x.--...:.x...::.x... 70M2I16M 60/86 69.8% 88/94230402 0.0% 2/86 2.3% 105481787 84732768 +3321 chr4 + 190214555 124470608 124470607 124470679 72 CTTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTCTTTTTTTT chr4 - 94230402 88442030 88442029 88442098 5788305 5788304 5788373 69 CTTACTCTTTTTGTCTTT---TGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTTT ...x......:.x.....---.x...........x:......:x.:...........xx.x.x....x.... 18M3D51M 55/69 79.7% 69/94230402 0.0% 3/69 4.3% 36028578 NA +3182 chr4 + 190214555 124470609 124470608 124470693 85 TTTCTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTTCTTCTTTTTTTTCTTTCTTTCTTTCT chr4 - 94230402 41570552 41570551 41570636 52659767 52659766 52659851 85 TTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCT ...:x:..x:.x..:....x::.:...:...............xx...x.x:xx:.:x...:.....::.xxx............ 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 82900057 NA +3889 chr4 + 190214555 124490933 124490932 124491267 335 CACAAAAATAAGAAGAAGGAAGAAGAAGGAAGA--------GAAGAAGAAGAAGA----AGAAGAAGAAGAA--GAAGAAGAAGAAGAAGAAGAAG-------AAGAAGAAGAAGAAGAAGA------AGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAAAGGGGGGAGGGGGAGGGGG--GAGGGGAGAAGCTAATTATAAAGCTCTTATATTTGCTAGGACAAGGAAAACAGATAA-ATGTGGGGAAAAAAGGCTCTGTGACAGAAAATCACTGACGCTAGCCCATAAAAGGAAAGCAATGGAA chr4 - 94230402 27547941 27547940 27548287 66682116 66682115 66682462 347 cagaagcacaaggagctggaggaggaacagagaaatgtgctggaggagcaggagAGGCTAGAGCTGGAAGAACTGAGGCAACACGAGACTGAGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGA---------------AAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAA---AAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAA ..x..:x.:...:..xx...:..:...x::...--------.:..:..x..:...----...:xx:......--..:.x.:x.x:...xx:....:-------.:..:.....:...::.:.------:..:...x..:.....xx..x:...x....x:.:......:..x:::..x:..::xx......:.:..::xxxxx..:..xx...:x.:..xx.::.x.:.:.:.:.:..--.....xxxx...:..:x.x.:.---------------.:...:.....:.x.x::.:-..x..::.:...:..:x---:x......::.xx..::..x.:...xxx..xx:.::...x..::... 33M8I14M4I13M2I22M7I19M6I110M2I22M15D20M1I17M3D47M 188/317 59.3% 347/94230402 0.0% 48/317 15.1% 96942992 93271563 +4074 chr4 + 190214555 124490958 124490957 124491118 161 AAGGAAGAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGGAGGAGGAG-GAGGAGGAGAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGAC-AAGAAAATGGGGAGGTGGGTCTTGAAGAAAGA-AAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ....:.x.x:x......-.:..:....::.:......:...x-.....:.x.::..:.x:.:xxxx......::.-.......x:..:.x...x.x:.....x.:......x..x:x:..:.x..:x.::x.:.:......:.::...x..-...:x:..:.. 17M1I24M1D32M1D75M1I11M 102/159 64.2% 161/94230402 0.0% 4/159 2.5% 80436981 NA +3004 chr4 + 190214555 124491026 124491025 124491102 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x..:.xx..:xx.x..:..xxx.x..x....x..x..x..:...... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 35412255 NA +3246 chr4 + 190214555 124491029 124491028 124491105 77 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGGAGGAGG chr4 - 94230402 89078771 89078770 89078847 5151556 5151555 5151632 77 GAAGAAGAAAAAGAAGAAAAAAATCAAGAATAAAATCAAATCGCAGGAGCCTGTGGTGGAGCAGCAGCAGGAGGAGG .........:........:..:.xx.....x....xx..:xx.x..:..xxx.x..x....x..x..x......... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 35412258 NA +3438 chr4 + 190214555 124491047 124491046 124491124 78 GAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .::...:..:........:.:...:..:.......:..:..:.::.::..xxx.:....x.:.::..:x.:.::.... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 84018505 NA +3090 chr4 + 190214555 124491076 124491075 124491138 63 AGGAGGAGGAGGAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAAAGGGGGGAGGGGGA chr4 - 94230402 37794326 37794325 37794388 56436015 56436014 56436077 63 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAA ....::.::.::.:..:.:.::..:..x..:x.:..:......:..:.........:...::. 63M 41/63 65.1% 63/94230402 0.0% 0/63 0.0% 86696750 NA +3796 chr4 + 190214555 124491941 124491940 124492147 207 AATTGAGCA-GCTGCTAGCTTTCCCATTTTTTTAAAACAATTATGAATGGTTTCATTTTGTGTCTTATTTGCTGTTCTTACATTCTTTTTTCTTGCAGCCAAGAACTAAAGACTTTCTGTTATAAGCCTATAGAGAT-TAAGAATTTAATTAAGAAGCAGCAGAACTTGTAGTTGGCACAACCCCCAGCAAACATGGTAGAAAAAAACA chr4 - 94230402 39711603 39711602 39711796 54518607 54518606 54518800 194 AATGGAGCAAGCTGTGACTCTTGTAAGGTTTT---AACACTTATGAATAGTTTCATTCTGTGGCTAGCTCATTACTTCCACATCCTTTCTCTTTTCAGTATCGGACCAAGTGATATCT-TTGAAAATGTAAGGAGATCTCTGAATGTGATT-GGAAATGCCAGCACTTACAACTCGCACA----CCAGCA------TTAGACAAAACCA ...x.....-....:x.x::..x:x.xx....---....x........:........:....x..x::.:::.::.:::....:....:.::..x...:xxx.:..:..:x:x.x...-..:x..::x..x:.....-.xx....x.:...-:...:::x...x....::.::.x.....----......------x....x....x.. 9M1I22M3D83M1D18M1I13M1D28M4D6M6D13M 125/192 65.1% 194/94230402 0.0% 17/192 8.9% 84780338 NA +3003 chr4 + 190214555 124495926 124495925 124495984 59 CTGCTGGGTTCACGCCGTTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACAACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..x.........x.:xx...x.xx.x.........:...........:..x...x.:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 106298787 83915768 +3551 chr4 + 190214555 124579132 124579131 124579284 153 ACTGAAGAGTACATTGGTGCAGCCTGTATAAAGAAGAAATTACATAGTAGACAATGAATGCTGTGTCATATGAGGATGCAAAGACCAGAGAAAAAGGATGGCTTTAAAAGGAGGAGAAAAATAGAGAAAGAGAAAACAATACTAAAAGAAAAC chr4 - 94230402 61919626 61919625 61919769 32310634 32310633 32310777 144 ACTAGGAAGTACAGAGGTCTAGCAAG-ATAAAGCAGATTTAGCTGAGAACACAATAAAACAATTGGTACAGGGAGAAG--------AGAAAAAAAAAATGTCTCCAAAAGAAAAAGAAAAATGGAGGGAAAAAAAAATAGAATCAAAGGAAAC ...::::......xx...x:...xx.-......x...xx.x:.xx..x.x.....:..xxxxx..x:.:.x.::..x.--------...:.....::...x..::.....:.::........:...::.:.:....xx.x.x.x....:.... 26M1D51M8D67M 92/144 63.9% 144/94230402 0.0% 9/144 6.2% 62659506 NA +3044 chr4 + 190214555 124588221 124588220 124588275 55 ATCAAAAACAAACAAACAAACAAAATAAAATAAACAACAACAACAACAAAAAAAA chr4 - 94230402 31015336 31015335 31015390 63215013 63215012 63215067 55 ATCCAAATCATCCTAAAAAACAAAACAAAACAAACAACAACAAAAACAACAAAGA ...x...x..xx.x..x........:....:............x.....x...:. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 93572885 NA +3048 chr4 + 190214555 124588221 124588220 124588269 49 ATCAAAAACAAACAAACAAACAAAATAAAATAAACAACAACAACAACAA chr4 - 94230402 64409950 64409949 64409998 29820405 29820404 29820453 49 ATTAAAAACAAACAAACAAACAAAAAAAAACCACCACCACCAACAAAAA ..:......................x....:x.x..x..x......x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 60178271 NA +3626 chr4 + 190214555 124588221 124588220 124588313 93 ATCAAAAACAA-ACAAACAAACAAA---ATAAAATAAACAACAACAACAACAAAAAAAAACAAGTAACCAAAATAACACCAGACATCTACAACAATC chr4 - 94230402 50013525 50013524 50013620 44216783 44216782 44216878 96 ATCTAAAACAACACACACCAACAAGTACAGAAAGAAAGAAACAACAACAACAACAAAAAACAACTAACCAAAAT-ACTCTACAAAGTGAGAACAATC ...x.......-...x..x.....:---.x...:x..:x..............x.........x..........-..x.:.x.x.x:x.x....... 11M1I13M3I46M1D22M 73/92 79.3% 96/94230402 0.0% 5/92 5.4% 74574696 NA +3247 chr4 + 190214555 124588224 124588223 124588290 67 AAAAACAAACAAACAAACAA----------------------AATAAAATAAACAACAACAACAACAAAAAAAAACAAGTAACCAAAAT chr4 - 94230402 18021857 18021856 18021945 76208458 76208457 76208546 89 AAAAACAAAGGAACAAGTAAGTGGGAATGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAAT .........x:.....::..----------------------..xx...:...........................:.x..xx..... 20M22I47M 56/67 83.6% 89/94230402 0.0% 22/67 32.8% 106566367 83648188 +3085 chr4 + 190214555 124606772 124606771 124606854 83 TTTGTATATACCTACATACATATGTACATATATACATGTATGTAGAGAGAGAACTTTCATATTCTAATTTTTCCCAATAGTTT chr4 - 94230402 50941874 50941873 50941956 43288447 43288446 43288529 83 TCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTTTATCTTTGTGGCTT .:.:.....:.x:.x.:......:.:...x...........:..xxxx..:x..x.x.:.......x...x..::x:.:.:.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 73664898 NA +3035 chr4 + 190214555 124628261 124628260 124628352 92 TCTTTTGATCAAATTGGTTATAATTCCAAAGAAATTTTAAAATACAGATTATTTTATTGACCTAATATTTGTTTTTTTTTTCTTTTTTTCTG chr4 - 94230402 55752013 55752012 55752104 38478299 38478298 38478390 92 TTTTTTTCCCAAGTAAACAATAACTAGAAGTATTCATTAAGATGGAGATTAGCTTATTGACCACAGAAGTGTCTTTTTTTTTTTTTTTTTTG .:....xx:...:.x:::x....:.xx..:x.xx:x....:..:x......x:.........xx.x.xx...:........:.......:.. 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 68876248 NA +3517 chr4 + 190214555 124629786 124629785 124630004 219 TATATAATTGTTCATGCATATACTTATTTTTATCAGGTGTTGCCTAGCAGCAAATAAACCCCTGGGTATCTAAATTAGAGCACAGAAGTAACTGAGCAAGCCTGGGGGATAGTGG---------------AATTTCATTTTCAACATAATTAGCTCTGTAATTGTAAGGCCCAGCTTAGTAGATGTATTTGGAAATGTAATTAATTATGATTGAT-----TTAAACACTGTTTAAAATG chr4 - 94230402 64130065 64130064 64130297 30100106 30100105 30100338 233 TGTATGACTGCACTTATATAAACCT---TCCACCAGGTGATATTTGAAAG---GTAAAACCTAGAAAGGGACAATGTATGAATGGAAGCAGCCAGGCAGGCTGGGGGAGTGGCCATCAGTTTATGCACACAACTGCATTTTCAACATAATTAGCTGTCTAATTGAGCATTATAATTTAACTGACACATTTAAACATGTAATTTATTTGAATGCATGCTGCTTGTAATCTGTTTATAATG .:...:.:..:x.x.::...x..:.---.::.:......x.:::.::x..---:....x..:x.::x:xxxx...xx:x.x.::....:.:.:::...:..:x....::.:.:x:---------------..:.x....................x.x......x:x:x:x:.::...::x..:::....::.x........x...xx:..xx..-----..:x.xx.......x.... 25M3D22M3D62M15I85M5I19M 126/213 59.2% 233/94230402 0.0% 26/213 12.2% 60499721 NA +3161 chr4 + 190214555 124644403 124644402 124644455 53 ATCTTAAAAAAAAAAAAAAAAATATATATATATATATATTTATATTATATATA chr4 - 94230402 69437733 69437732 69437785 24792618 24792617 24792670 53 ATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATA ..:..:.........x......x.:x.............x.....:x..:... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 55206670 NA +3237 chr4 + 190214555 124644408 124644407 124644464 57 AAAAAAAAAAAAAAAAATATATATATATATATATTTATATTATATATATATTTATAT chr4 - 94230402 69437740 69437739 69437796 24792607 24792606 24792663 57 AAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGT ........x........:x...............x...x...:...x:..x..x.:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 55206668 NA +3359 chr4 + 190214555 124659060 124659059 124659163 104 CCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTTCTCCCTCCCCTCCCCTTCCCTTCCTTTCCTTTCCTTCTCTTTCTTTATTTTTTTTTTTG chr4 - 94230402 52740980 52740979 52741083 41489320 41489319 41489423 104 CCTCCTCTTCCCTGCAATTTCACCCCCTTTCATCCGTGTTTCTTTTTACCTCCCCAGCCCTTCCCTTCCTACTAGGTTTCCATATGTCCCTATTTTGTATCTTG ...:.:.......x.xx..:.x::.....:.x.:.x:x.::....:.x.......xx.............x::xxx.::::x.x.x..::......x.x.:... 104M 65/104 62.5% 104/94230402 0.0% 0/104 0.0% 71918080 NA +21661 chr4 + 190214555 124664466 124664465 124665742 1277 AAAATTAAAACA---AGATCTTCTCTGTAAAGCAAATATATTTATTATGCACTTTCATATACACAGGGATTTTTTGAGTAATATCATACAAGGGATAAAATAAAACTTTTACAATGTGAA----ATTCAATGTACATTTTTGGCTATTTACATACCTCAAACCAAGGGAAAAATAAAAAGAAAGCATTTGTTTGC-AACTACATTTGCTGAGAAGTGTAAATGGAGGACATTAAGCAAAACAAATATTTGCATAGCCAAAACAATATTGAGAAAAGTATTTACTTCTGT-TTTTTAAGT--ATCAAACTATTTTTGGTGAGAATTCCAGTGAGGGTGGGGGTGAAAACAAAGAACAAAAATTATTGGCTGTACTTTGCAGTACGCACTGATTTCAGGTCATTTTTCCTTCCAAAACCTTTCTTAGAAACATTCAGATTTTTATTTCATT---------ACTGTATTTTTATCA-CTTTCC--TTATTATAAACTCATGATATTTAG-------------GGAATAGACACAGACGGAATGTTATAAAAA-------------TGTTATAAGCACATGCCATCATAGTTGTGTAG----------TGGCAACAGCTGATTTATAAAATTTAAAGATTTTAATTTCAAAAATATCT-----ATTAAGGAGTTTTATATTTGGAGGACAATTTTTACTTTTTAATGGAGCAGAAGCCATTTTCATTTATAGTATTAAATCCCCCACAGAAACA-AATAAGCAAGG-------CAGGGCATCTCCAGCACC-------CATCCTATCATCCTTAT---------CCTAACTCAAAGTCATTTATGTTCTATTCCAAAA-------CATAATTTATA-------------------TAAAAACATCCCGAGGAA---TACTTACTTTTGAAAATCGTATTTTTCCAATAGGTTCTCTTCCTACCAATTGCTTCAAGTGTATATAGTATGGATATGAAAACAGTTAGCTCTTTGAAAAACATAAATCCCTTATGCAAT--GTCATATCTTCGCCCTTTGGACACAAGGTGCAATTTTGTAAAAACAATAAAATTAAATAAATACAATTTCAATAAT--TCAAAGTTAATAGAAAAACTGGCAGCTTTCAGGGTTCTCTTTCTAAAG----AAAATTACATGTAATAG-AAATTAGAGCTTCATCCTC-TACAGTAATGTAAATGTACTGTATTTGAGATATGAGTAAAGTTGGTTCTAATAATAGTAT-GTGTTCATATTTATTAATAGACTCATTAACACTTTTAAGGCTACTTTGCAAGAGTCCCATTAATTTTATTTAATAAATGTCCCATAGGGACAAG-AATTCAATACTTGAAACATTCACATTTGAGTTATTAATATTGCCATGT chr4 - 94230402 39779809 39779808 39781125 54449278 54449277 54450594 1317 AAAATTAAAACAGTTAGATGTCTGCTGAAAAGCAAATATATTTATTATGCACTTTCATATACACAGGGA-TTTTCACTTAATATAATACAAGGAATAAAATAAAAATTTTACAATGTGAAATTCATTCAATGTACATTAAAGGCTATTTACAACCC---ACTCCAGGAAAAA-------------GTCTATCTGCAAACCAAGTTAACTGACGAGTTCAGATGGGGAATATTAAGCATAACAGATGTTTGCATAG-CAGAGTA--ACTGAGGAGGGAAAATACCTTTTTATTTTTAAATAAATGGTAATGTTTTCAATACTGATCACAGAGAGG-------------------ACAAAAATGCATCATTGTGCCTC------TATACT--TCTTAATGCTTTTCTCTTTTGAAGAGGTTTC-CACATGCATACAG-TATTGACATCGGTGTCCACAAAACAGTCTTTTCCCTAGCTTTCCCACTACTAGGAGTTTTAGATGTCTTGTGGAGGTGACCTTGGAGGGGGCA---ATGAAATGTGATGAAGAGAAAGAGGATTCGTGTTTTATTTGGTTTTTTTTTAGGTTGGGAGGACCGTCACACTGTCAGAAGAAGATGTGCTGAGTCACAGCTATGCAACTCCACTCACCTCCACCAGATCATACAGATGTAAAGGAGCAGAGCAGAACAGAGAGAACAATGGGGGAAAAGCGACTTGCCTTTGGA-------------CACAGAAACCTCACAAGCAAGGAGATTAAAAACTCACACACAACAGCAATGTGGAATTACACAGACCTTCTGAGAAAGTACATGTTTTAAAGCAATTCATGCTCTGTTCCAAAGCTATGTTCAAAATCTGTAAGAATTGTTATTTTCTTTCTAAAAACATTTTCAGGAGGTCTGCTTTCTGCTGA---------TTTGGATATAGGATTTCTTC--AACAGCTGTTTCAAATGTAAATATTATTCACACAAAAACCGTCAGGCTATCTATAAATGGTGGCCCCTTGTGAAACTGACCACGTTTACGTCCTCTGTCCACAAGGTGCAA--TTAATAACACaataaaattaaataaatataatCCCAATGACAGTCAAGGTCAGTAGAAAAA-TGTCAGCATTCAGGGATCCCTTTCTACAGAACAAAACATACATCTAACAACCAAGAAAAGTTTTATTCTTGCACAGCATTGCAGATGTACTGTACTTGAGGTTCAGAACAAGTTTG--CTGAGAACATTTTGGTACTC---TCCCTTTACTGAGCCACTAATTCTCTTGAGGCTGTTTTGCAAGACTCCTGTTATGTTTATGTTATAATTGTCCCACAGGGACAAGAAATTTAACGCACGAAACATACA-----GAATAATCAATATTGCTGTGT ............---....x.::x...x.........................................-....::xx......x........:...........x..............----..............xxx...........xx..---.x:.x...:....-------------:.:.:.:...-...:.x:..x:....x:...x:.:....:.:.:........x....:..:.........-..:.::.--.:....:.::.x.xx...:.:.x.-.......:.--..x:x.x.:....:::.:xx:..:x...x....-------------------........xxx.x::...:.:.:------:::...--.:.:.:xx.x...:..:..:x..:.xx....-:.x.x:...x...-.x..x.:x..:x.---------..x..x....:x::.-......--:..:..x:.::.:xx...:.:.x.-------------...:x:.:..---.:.:.....x..:..:.-------------....x..xx::xx.x::x.:xx:....x.x:.----------..x..:x..xx...x.::x:.:.:xx.:xxx.x:..:.:..xxx.:x..:-----..:.x:x..x.x..x.xxx.x..::..:xx:xx.xxxxx:.....:.x.:....x.:..x.x...:x.-------------.........x-x.:........-------x.:xx..:x:x..:..x.-------x..:x:.:x:x....x.---------.x.:x:.:....:x...:...:...:.......:-------..x...:.:..-------------------.........:::x....:---.:...x..x:...---------...xxxx.....x.:.....--.x..::..:.....:....x...x...xx.:.::.....x..:..x::x.:x.x...::xx:::.....:..x..:--::..::.:.x..:...:..xx............--..:xx..x....................:...::....:.:--....:..:.:........-..x....x.......x..:.......x..----...xx.....x...:.:-x..xx.:..:..:..:..:-:....:.x..:.:..........:.....:.x::::xx.....x.--..:.x..:.x.x.-..::..---.::x..x.:x..x:..:...:x..:..:.....::.........x...::...xx.....x.x....x.......:.........-....:..::.x:.......x..-----..:.x..:........::... 12M3I54M1D50M4I32M3D13M13D10M1I59M1D7M2D24M1I9M2I33M19D23M6D6M2D31M1D13M1D13M9I15M1I6M2I24M13I10M3D17M13I32M10I50M5I68M13D10M1I11M7I18M7I17M9I34M7I11M19I18M3I13M9D20M2D76M2I33M2D41M2I18M1D29M4I17M1I19M1I45M2D13M1I6M3D85M1I22M5D21M 796/1188 67.0% 1317/94230402 0.0% 218/1188 18.4% 84884657 NA +15991 chr4 + 190214555 124666995 124666994 124667537 543 AGGTGTAGTGAACATAGAA--CAGTTGCAAGATTTGT-TTTATTGAGCAACGTCTTTAAAG---ATACAAGAAACAGGCCATACACTACAATGCAATGTGACTGAAACAGTATGTTTAAGTTTCTTTT-----GCCACAAAAAGAAAAAAAAATAAATACAAGGAACACTGCCTTTTCATATATATTTGATTATGGCACATGCACATTTTTTATCACATCTT--AACTTAAAATACTCAAATTTTC---TTTTCAGCTTTTATCAGGGAACTGCAGTATGTATCT----GCATTTTTAAA-------AAGTGCTTATTCCTGTGTAGTGAATACAAAGCACACAAAATGAAATTTTTTAAGCACAGAGGGTTACATTG-AGAAGGCAGCCTTACTATTTAGGCACATTACAGTAATTAAGGTAACTGTACTGCAGAGATCACATTCTTCATTTTTTTTGTTTTTTCAGCAAATCAACAGGCATATGTTTCCATCCAG--TAGCTGAAGAACCACTC-CATCACAATGTCTTCTGTTTCACAGAAT-AGGAAACTAATGCAAAAGTTAAAAAAAAA chr4 - 94230402 39782347 39782346 39782902 54447501 54447500 54448056 556 AAGTACAGTATTTATAAAATCCCACTACAAGATTTGTATTTCTTGAGAGAACTTTTTGAAGCACACAGAAAAGACTGACCATACATTACA--TCAATGCAAATGTGACAAAGTGTTTGCACTTCTTTCCTTTAGCCA--------GAGGAAAATAAACACAAAAAGCATGGCCTTTTCATACGCAGTTCACTCTGGCACATGCACCTTTGCCA-AGCATTCTGGAAATCACAATTCCTTGTTCTTACAATTTTCAGCTGTTGTCAGGGAAATATCGCATGTATCTTTCTGCAATTTAAAACAAAAAAAAGTGCTCATTC-TGTGTATTAAATACGAAGTACACAAAAT-AAATTTTTGAAGCACAGAGGGTAATATGATGGAAGGCAGCCCGAAAATGTAGGCACGTTACAGTAATTAAGGTAACTGTACTGTAGTATTCACATTCTTGAGTTTTTAGGTG-----GACTAAACAAGAACTGTATGCTTCCATCCCAGCCCGTTGATAAATCACTTGGAGCAGAAGCGCTTCTG-TTCACGGCATCATGAAACTGACCTAGAAGTATAAAACAAA .:..::...:xx:...:..--.x::.:..........-...x.....x:.xx.:...:...---.:.x..:.:..x.:.......:....--x.....::.x..x:...:x:.....:x::......:-----....--------:.::........:....::.:..:x...........:::.x..x.:.x............x...x::.-x:...::.--..x.:.x...x.::x:x.:..x---.........x..:........x.::x.:........----...x...x...-------.......:....-......x.:.....:...:.........-........x.............x.:..x:-:..........:x.xx..x.......:..........................:..x:x..........x.x.....xx..x-----::.x..x...x.:x::....:........x:--:x.:...x:..:....:-x.x..x..xxx......-.....:.x..-.x......:.:x:.:....xx....x... 19M2I16M1I23M3I26M2D36M5I4M8D68M1D8M2I22M3I36M4I11M7I12M1D28M1D29M1I82M5D31M2I17M1I17M1D10M1I29M 378/524 72.1% 556/94230402 0.0% 51/524 9.7% 84884648 NA +240461 chr4 + 190214555 124668955 124668954 124672551 3597 TTTTACTCTTTATGTTGACAAA---ATATTACCTTTTATAATGGTGTTTCCTTTTTATAGTTGAAGCTAGGGTCAGAACCTTCAATCTGAAGCTTCAGAGCTTGTTTAAGGCTTAATTCTGTCTCTGAGGAAGGGTATCCCTCCAACACTTCCTGATGCCCTCTATCTTGCATTGTTCGTGGGACTGAAACCCTACCAAGAAAAACCTGGTTGCTCTGAAGATGATAATTTGGATTTGTCATTATTCCATTTCTCTTCTTCTGTTCCCCACTTTGTTGGTGAATAAGAAACTGCTGTTGAGATCGACCAATTTCCTGCTGAGCTGAAGGTATCATAATTTTGCATTGAGATTCTGCTGGCATTTGTTTAGGTGGTGCAGCAGTCCCGGATTTGGCTATAGGTCCTCTTCTATCAAACTGAGTCATTTCATATTCTAAAACCTTTGGCTGTGAAGAATTACTTTGTTTCGCTTTTTTCCCAGCTGATCCAGACTTGGCAGAATTTTCTGATTTCCCCCCTTTACTTGCTTTAGTTGACTTCAAACTGGGCTTTACTTGACTCCACTCAAATTCACTACTTGGTGAATTATGACTCTGTCCTAAGGACTGTGTTGTGGAAGATGGGGAAACAATTGACTGTCGACTTCTACTGCGTGGCAATGAATGCTGCTGAATTTGTTCTGTAAATGACAAGTTATGAAAGCTATCAATTGGCACTGTTTGAGCCGTTGCTGTAGATGAAGTAGTTCTCAAAGATGAATTTTTTGAGCTTTTCAGGGAATTATTTGACAGTGATGACTTCTGCCGGTCAACTGTAGAATCTGGAGATTCTGAAGGAGAACTAAAAGCATGAGTAGGCCCATTAGGTAAACCACGTAACGAAGGCTGCATATCCCCTCCACCAGTACTACCAGAGCTATTTGATTTAATTGTTAATGACTGCACTTTTGAAGACAATGACTGTAGAGGTTTTTGCTCCATTGTGTGAACAGGAGATGGGGAACAGCCATTCAAACTAGATGCACCATATTTTTCTAATAATTTAATTATCTGAGAATGTCCATTTTTGGCTGCAACACGCATAGCAGTGCGTCCAAATTGATCAGCATGGTTTGGATCAGCACCATGCTCTAATAAGACCTGAACAACATCAATGTGCCCTTCCTGGGCTGCAATACAGAGTGCAGTTGCACCTTGGTTACATGTATGGTCAACTACAGCACCATGCTCAATCAGAAGCTGAACCACTTTTACATGGCCCTGCCAGGCTGCAGACTGCAAAGCAGAGCGCTTTTCATTGTCTGCAGCATTGACGTCAGCATGGTATGCTATCAGGACCTGCACCATTTCCATATGGCCTTGCCAACAAGACACATGAAGTGCTGTCCTTCCTTCAGCATCACTTGCTTCTACGTTTGCACCATTTTCTAAAAAATATTCGGCCATTGTAAGCTGATTTTCTAAGGCCAAGATATAAAGTGTAGGCCGACCATCAGCATCTTTGCAGTTAACATCAGCACCATGGCTAAAAAGCAATTCAACAATGTCCCTGTGCCCTTCTAATGCAGCAACCCGCAGTGCATTTCTTCCATCATAACCTCTTTGATCAATGTTGGATTTGTTTTCCAGTAATATTTGAACACAATCATAATGACCCTCTTGTGAAGCTAATATGAAAGGGATTCGTCCATCATTGTCAATCTCATTTGTTCTAGCACCTTGTTCAATAAGTGCTTCACATATCAATCTGTGCCCTTCAAAAGCTGCCATGTGCAAAGGTGTCCATCCAGCATCATCTCTGTGATTTTCATCTAACCCTCTATCCAGTAGAGTACGTACCACCTCAACATTTCCTTGTGCTGAAGCTATACTGAGGACTGTCCTACCTTCACTATCAATACTATCCACAGCTGCACCCCAAAACAAAAGTGTATTTACAACTGATGCATGACCCATAGACGCTGCTGCTAAGAGGGGTGTACGGCCATTGTTATCTGTGTGATCTACATCTGCTCCCCCTTCTAGAAGCAAGTCAACCACATCAACATGTCCTTCATAGGCAGCTACCAGCAGTGGAGTCATGCCATCTTTATCACAATGATCTACTTCAGCACCTCGATCAATTAAAAGGCTAACAACTGATGCGTGCCCTTTACTTGCAGGCACACAAAGTGCAGCTACAGAGAGTGCAGTCCTGCCATCAACATCCTCATGATTTACTTCTGCTCCATGGTCCAGTAGGTGTTCCACAATCTCTCTATGTCCCATGTATGCTGCTGCTATCAAAGCAGTTCTACCTTCATTATCAGCTTTGTTCACTTCAGCGCCATGTTGTAGCAAATTCAGTACAATATCCTCGTGTCCTCCCCATGCTGCTGCTCTCAAAGCTGTTCGGCTATCAGCATCTGCACAATCCACTTTTACGCCAGCATAAAGTAGTGCAGAAACTACCTCAGTATGGCCACCCCAAGCAGCAGATCTTAATGCTGTCCAACCATCTTGATCAGTATGATTAATATTTGCTCCACACCCAATCAAACAATTAACCACCTTGGTATGTCCCTGTCTAGCCGCTAGAGTGAGTGGTGTATGTCCATGAGCATCTTCTATCTCTAAATCTGCTCCCCTAGAGACAAGTAAATTGACTACATCAAGACTGCCACTATATGCAGCATTAGCCAATAATGTTCTCCCATTTGAATCACACTGATTTACTGAAGCTCCATTATCTAATAATGTCCGAATGGAATCCTCTCTTTCTAAGGCTTGTCGAACTATGCATGATGTGCGATCGTCTTCACTGTTGACATGAGCCCCAGCTTTAACCAACAGCTGTAGCACTTCTTGTTCCTTGGGTATCAAAGTAGAAAGGGAATCTCTGACAGGTGTACCATTCCATATCATCCACAGAGCTAACTCCGCTGTCTCTAATTGTAAGTTTGAGTTAATTAAGTGCAATGCAAATTCTTGTGCTTCCAATGGTGTTAAATTCTTGGCTTGACAGGTATAACTCATAGCCAACATTCTGTGTCCTTCTGCTGCATTACATAAATACTTCTGAGTACAGTGTTTCACATCCAGAAGCCACTCGGCAAAACTATAATGAAACAGTATTTTTGTATTTCCTAGTCCATCAACAAGAAGTTTGGAGAGGATATCTAACTTGCGTTGAAAATCTTCCAAAGTTAACGACATGTTTTTGGTCCATACTGCGTGATATAATTCCGTTATGGTCAAAGGTCGGCAGGCTGCAAGAATCACATTCAAAATAGGCTGAACCTTTGCAAATTGTTTTCTTACAAAAAGTCTTTGGCACAGCCAGAGATATAAACCATTTAGAGTTCCTGGGATGTCACGAATTTCTCTTAACATAATAAAATTTTCTACAACTCCATCTAAAACTCGTTCTAGGTAAAGAAAGCATCCACTGCTTTTAATGTGCAGTTGATTTAACATCTCTGCAGTTTCTTTTGTGAGGTGTTGTCGCAAAGCTTCTTCTTGATCTAAACGATGAAGAATGTACTGCTGAACATCCTTGACGATATATGCCTTCCGAAGGTCATCTAAACTTATTTTTCGAAAACCTA-AAGAAGAGATAAAA chr4 - 94230402 39785476 39785475 39789072 54441331 54441330 54444927 3597 TTTTACTCCTT-TGTGAATGGACTGATTTTACCTTTTATAATGGTGTTTCTTTCTTGTAGTTGAAGCTTGGGTCACCACCTTCAATCTGCAGTTTTAAGGCTTGCTTAAGGCTGAGTTCTGTCTCTGCAGAAGGGTAGCCTTCCAGCACCTCCTGATGCCCTCGATCCTGCACTGTTCGTGGGACAGAAACCCTACCAAGAAAAACCTGATTGCTTTGAAGATGATAATTGGGATTTGTCATGATTCCATTCCTCTTCTTCTGTTCCCCACTCTGTTGATGAATTAGGAACTGCTGCTGAGATCGACCAACCTCTTGCTGAGCTGGTGGCACCAAGATTTTGCACTGTGGCTCTGGCGGCATGGATTTGAGTGGCACACTTGTCCCAGATTTGGCAATAGGTACTCGTTTATCAAACTGAGTCATTTCATACTCTAACACTTTTGGTTGGGTGGAACTATTTTGTTTGATTTTTTTTCCAGCTGACCCAGACTTGCTGGAATTGTCTGTTTTCCCCCCTTTGTTAGCTTTTGTTGATTTCAAACTAGGTTTCACTTGGCTCCATTCAAATTCACTACTTGGAGAATTATGATTTTGACTTAGGGAGTGGGTTGTGGAAGAAGGAGAAACAATAGACTGCCTGCTTCTGCTGCGTGGCAGGGAATGCTGCTGTATTTGTTCCGTAAAGGAGAGGCTGTGGAAACTATCAATGGGCACAGTCTGAGCAGTTGCTGTCGATGATGTGGTACGGAGAGAAGAGTTTTTGGAACTTTTCAGGGAATTATTTGATAAAGATGACTTCTGACGGTCAACTGTAGAATCAGGTGACTCTGAAGGAGAACTGAAGGCATGAGCAGGCCCATTAGATAAGCCCCTCATGCTAGGCTGCATATC---TCCACCAGTACTCCCTGAACTATTTGACTTCATTGTTAAGGACTGCATTTTAGAGGAGACCGACTGTAAGGGTTTTTGCTCCATTGTGTGGACTGGAGATGGAGTGCAGCCATTCAGAGTAGATGCACCATATTTTTCCAGTAATTTAATAATCTGAGAGTGCCCATTTTTAGCTGCAACACGCATTGCAGTGCGCCCAAACTGATCGGCATGATTTGGATCAGCACCATGCTCAAGTAATATCTGGACAACATCAATGTGCCCTTCTTGGGCTGCGATGCAGAGTCCAGTAGCACCTTGGTTACATGTATGATCAACCAGAGCTCCATGCTCAATGAGAAGCTGCACTACCTTCACATGACCTTGCCATGCAGCAGACTGTAAAGCAGACCTCTTCTCGTTATCTGCAGCGTTCACATCAGCATGGTATGTTATCAGCACCTGTACCATCTCCAAATGGCCCTGCCAGCAGGAAACATGGAGTGCTGTTCTTCCTTCTGCATCACTAGCTTCTACATTTGCACCATTTTCTAAAAAATACTCAGCCATTGTAAGCTGGTTTTCTAATGCTAAAATATAGAGCGTTGGCCGGCCATCAGCATCTTTATAGTTTACATCTGCTCCATGGCTGAGCAGTAGTTCAACTATCTCTCTGTGACCTTCTAAAGCAGCAACACGGAGGGCATTTCTCCCATCATAGCCTCTCTGATCAATGTTGGATTTATTTTCCAGCAATATCTGCACACAATCATAGTGACCTTCTTGTGCAGCTAATATGAAAGGTATGCGTCCATCATTATCAATCTCATTTGTTCTAGCACCTTGTTCTATAAGAGCTTCACATATCAACCTGTGACCTTCAAAAGCTGCCATATGCAAAGGTGTCCAGCCTGCATCATCCCTGTGATTTTCATCCAGCCCCCTGTCCAGCAGAGTCCGTACTACTTCAACATTGCCTTGTGCAGAGGCTATGCTCAAAACTGTTCTCCCTTCGCTATCAATGCTATCAACAGCTGCACCCCAAAATAAGAGAGTATTTACAACCGAGGCATGGCCCATGGAGGCTGCAGCCAGGAGTGGCGTACGACCATTGTTATCTGTGTGATCCACATCTGCTCCTCCCTCCAGGAGCAGGTCAACAACATCCACATGTCCTTCGTAAGCAGCCACCAGCAGCGGTGTCATGCCATCCTTATCACAGTGGTCAACTTCAGCACCTCGGTCAATGAGAAGGCTGACCACCGAGGCATGCCCTTTGCTGGCTGGAACGCAGAGTGCAGCAACTGACAATGCTGTCCTTCCATCCACATCCTCGTGGTTCACCTCTGCACCATGATCCAGCAGGTGCTCCACAATCTCTTTATGCCCCATATATGCTGCTGCAATCAAGGCTGTTCTGCCTTCGTTATCAGCCTTATTCACTTCAGCCCCATGCTGAAGCAGATTCAGCACAATATCTTCATGCCCTCCCCAGGCCGCTGCTCTCAGTGCAGTTCGGCTGTCAGCATCTGCACAGTCCACTTTGACTCCGGCATAAAGGAGCGCAGAAACTACCTCGGTGTGCCCACCCCATGCTGCGGATCTCAGTGCTGTCCAGCCATCATGATCTGTGTGATTAACATTGGCCCCGCACCCTATCAAGCAATTCACCACTTTGGTGTGCCCCTGCCGTGCAGCTAAGGTAAGTGCTGTTTGACCATGAGTGTCTTCTACCTCTAAATCTGCTCCCCTGGAAACGAGCAAGTTAACTACATCGAGGTTGCCGCTGTAGGCAGCGTTGGCCAGGAGTGTTCTCCCATTTGAGTCACACTGGTTGACTGATGCCCCGTTGTCTAGCAAGGTGCGGATGGAGTCCTCTCTTTCCAGAGCCTGCCTCACAATGCAGGACGTGCGGTCATCCTCGCTGTTGACGTGAGCACCAGCTTTCACTAGGAGCTGTAACACTTCTTGTTCTTTGGGAATTAAGGTTGACAGGGAGTCTTTGACAGGTGTGCCATTCCATATCATCCACAAGGCCAGCTCAGAAGTCTCTAACTTTAAATTGGAATTAATTAGATGCAATGCAAATTCTTGAGCTTCCAGTGGTGTTAAGTCCTTTGCTCGGCAGGTGTAGCTCATGGCTAGCATTCTGTGCCCCTCAGCCGCATTACACAGGTATTTTTGTGTGCAGTGCTTCACATCCAACAACCATTCAGCAAAACTGTAATGAAACAAGATTTTTGTATTCCCAAGTCCATCAATAAGGACTTTGGACAGGACATCCAATTTGCGCTGAAAGTCTTCCATAGTCAATGTCATATTTTTGGTCCACACTGCATGATACAGCTCCGTCGTGGTTAGCGGCCTACAGGCTGCAAGAATCACATTAAGAATAGGCTGCACCTTTGCAAATTGTTTTCTCACAAAAAGTCTCTGACAGAGCCAAAGGTATAGGCCATTCAATGTTCCCGGAATATCACGGATCTCTCGTAACATAATAAAATTCTCCACGACTCCATCTAGGACACGTTCCAGATACAAAAAGCAGCCACTGCTTTTGATGTGAAGCTGATTCAGCATTTCGGCAGTTTCTTTTGTTAGATGTTGTCTCAGTGCTTCCTCCTGATCCAAACGATGCAGAATATATTGCTGCACGTCCTTCACAATGTATGCCTTCCGCAGATCATCCAGACTTATTTTTCTAAAACCTATTGGAAGAGATGAAA ........:..-...x:.:::.---..x......................:..:..:...........x......xx............x..:..:.::.....:........x.:...........x:........x..:....:...:.............x...:....:............x.......................:.....:..............x...........x........:....................:.....:.....x..:........:.............::..:..........:x..:.:..x:........:..x.::....x:.....xx:...::....::..x:x.....:........x......x...x.:......................:.....x..:.....:..x.x:...:..:.......x::......:........:.........x::.....x....x............::.x.....x.....:........:..:..:.....:.....:.................x.........:.:..x.:..:...x..x...........x..:........x.....:.x:.....:..........:x...........x........:.....x..x.:.:.:..:..:........x.....x..:.....x........x.....x..:..x.xx.:...x..:.....x..:....................:.:x...........x.................x..x..:..............:..:.......:...........:...:..x.x:.xxxx............---............x..x..:........:..x........x.......:...x..:..x.x:.......::....................:..x........:.x:..........:.x...................:.:.........x........:..:........:..............x........:.....:.....:.....:....................x.:...x.:...:....................:........:..:......x....x....................:.....:.x...x...........x........x..:..:..:.....:..:.....x..x........:........x.x...:..:..:........:..x..:.............:......x.....:.....:....x......:.....:..:..x.....:........:........x........x........:.......................:..:..............:........x..:..:.....:..:..x.....:..............::....x.....x..x........:.:x..:.:......x..x..:.....x........x........x..x..x........:........:.....:.................:........:.....:..x...........:.....:.......x...............x..x...........:.............................x.....x..............:.....x.................:..............x..x........:..............:.:...:..:.....:.....x.....:..:........x........x..:.....:..x.::.....:..x.....:........:.....x.................:..:..x...........:..x.....:.....:..x.....x..:.:...x..:.....:....................:...........:..:..:..:....:......x.....x...........:..:.....:........:..x...........:........:..:..x..............:.....x.:......:..x..:..x..:........:..x..x..x..:..:........x..x..x.:...x.....x.....x........:..:..:..:.....x.....:.....:.....:............:....:.....:...........x.....:..x.....:.....:........:..:...........x.....:..x....:......:........:..:..:........x..:..........:x..x........:..............:........x..x..:........x..:..............:..:..x........x..x..:.....:.:.........:.....x.....x..:.......:...x..:..:.....x.....:.....x.....:.....:..:.....:.xx..x....::..:....x...x..x.......::.......:..................:..:..:..:..:..:........:..::....:..:..x.....:..:....:x.:...............:........:..x.....x..:..:..:....::..x..x..:.....:...........:.::..:..:.xx..x.....x..:.....:..:..:..:........:.....x........x..:.:x.......:............:.....x..:..:..x..x.....:...:..........:...................::..:.:...x.xx........:.x...:..x..:.......::.................x.......:.........:.:...x...:.:.....:..:.....:..:.:.........:..:..x..:........:.::..:..:..x..:.....:..........:x.:...:..:........:..........:x...........:..x..........:...:.x......x....:...:..:.....:.....:.......x...:..:.x...:...........:.....:.....:.::.....::....:.:x..:.x:....................x.:.........x....................:...........:..:..x.....:..:....::.....:.:x.....:..:..:.....:..:....x...............:..:..:..........::..x.....:..:..x.:......x...........:.....x..:.....:.:...:..x..............x..:.......x..:x.....:..:.....:........x.....:..:.....x..:.....x..:..:...........x..:.....:.:...........x........-x:........:... 11M1D10M3I868M3D2690M1I14M 2964/3593 82.5% 3597/94230402 0.0% 8/3593 0.2% 84883479 NA +9604 chr4 + 190214555 124669972 124669971 124671257 1286 GCACCATATTTTTCTAATAATTTAATTATCTGAGAATGTCCATTTTTGGCTGCAACACGCATAGCAGTGCGTCCAAATTGATCAGCATGGTTTGGATCAGCACCATGCTCTAATAAGACCTGAACAACATCAATGTGCCCTTCCTGGGCTGCAATACAGAGTGCAGTTGCACCTTGGTTACATGTATGGTCAACTACAGCACCATGCTCAATCAGAAGCTGAACCACTTTTACATGGCCCTGCCAGGCTGCAGACTGCAAAGCAGAGCGCTTTTCATTGTCTGCAGCATTGACGTCAGCATGGTATGCTATCAGGACCTGCACCATTTCCATATGGCCTTGCCA-ACAAGACACATGAAGTGCTGTCCTTCCTTCAGCATCACTTGCTTCTACGTTTGCACCATTTTCTAAAAAATATTCGGCCATTGTAAGCTGATTTTCTAAGGCCAAGATATAAAGTGTAGGCCGACCATCAGCATCTTTGCAGTTAACATC-AGCACCATGGCTAAAA--------AGCAATTCAACAATGTCCCTGTGCCCTTCTAATGCAGCAACCCGCAGTGCATTTCTTCCATCATAACCTCTTTGATCAATGTTGGATTTGTTTTCCAG-------TAATATTTGAACACAATCATA--ATGACCCTCTTGTGAAGCTAATATGAAAGGGATTCGTCCATCATTGTCAATCTCATTTGTTCTAGCACCTTGTTCAATAAGTGCTTCAC--ATATCAATCTGTGCCCTTCAAAAGCTGCCATGTGCAAAGGTGTCCATCCAGCATCATCTCTGTGATTTTCATCTAACCCTCTATCCAGTAGAGTACGTACCACCTCAACATTTCCTTGTGCTGAAGCTATACTGAGGA------------------CTGTCCTACCTTCACTATCAATACTATCCACAGCTGCACCCCAAAACAAAAGTGTATTTACAACTGATGCATGACCCATAGACGCTGCTGCTAAGAGGGGTGTACGGCCATTGTTATCTGTGTGATCTACATCTGCTCCCCCTTCTAGAAGCAAGTCAACCAC---ATCAACATGTCCTTCATAGGCAGCTACCAGCAGTGGAGTCATGCCATCTTTATCACAATGATCTACTTCAGCACCTCGATCAATTAAAAGGCTAACAACTGATGCGTGCCCTTTACTTGCAGGCACACAAAGTGCAGCTACAGAGAGTGCAGTCCTGCCATCAACATCCTCATGATTTACTTCTGCTCCATGGTCCAGTAGGTGTTCCACAATCTCTCTATGTCCCATGTATGCTGCTGCTATCAAAGCAGTTCTACCTTCATTATC chr4 - 94230402 39786789 39786788 39788074 54442329 54442328 54443614 1286 GCATGGTATGTTATCAGCACCTGTACCATCTCCAAATGGCCCTGCCAGCAGGAAACATGGAGTGCTGTTCTTCCTTCTGCATCACTAGCTTCTACATTTGCACCATTTTCTAAAAAATACTCAGCCATTGTAAGCTGGTTTTCTAATGCTAAAATATAGAGCGTTGGCCGGCCATCAGCATCTTTATAGTTTACATCTGCTCCATGGCTGAGCAGTAGTTCAACTATCTCTCTGTGACCTTCTAAAGCAGCAACACGGAGGGCATTTCTCCCATCATAGCCTCTCTGATCAATGTTGGATTTATTTTCCAGCAATATCTGCACACAATCATAGTGACCTTCTTGTGCAGCTAATATGAAAGG-TATGCGTCCATCATTATCAATCTCATTTGTTCTAGCACCTTGTTCTATAAGAGCTTCACATATCAACCTGTGACCTTCAAAAGCTGCCATATGCAAAGGTGTCCAGCCTGCATCATCCCTGTGATTTTCATCCAGCCCCCTGTCCAGCAGAGTCCGTACTACTTCAACATTG-CCTTGTGCA--------GAGGCTATGCTCAAAACTGTTCTCCCTTCGCTATCAATGCTATCAAC-----AGCTGCACCCCAAAATAAGAGAGTATTT----ACAACCGAGGCATGGCCCATGGAGGCTGCAGCCAGGAGTGGCGTACGACCATTGTTATCTGTGTGATCCACATCTGCTCCTCCCTCCAGGAGCAGGTCAACAACATCCACATGT--CCTTCGTAAGCAGCCACCAGCAGCGGTGTCATGCCATCCTTATCACAGTGGTCAACTTCAGCACCTCGGTCAATGAGAAGGCTGACCACCGAGGCATGCCCTT-TGCTG--GCTGGAACGCAGAGTGCAGCAACTGACAATGCTGTCCTTCCATCCACATCCTCGTGGTTCACCTCTGCACCATGATCCAGCAGGTGCTCCACAATCTCTTTATGCCCCATATATGCTGCTGCAATCAAGGCTGTTCTGCCTTCGTTATCAGCCTTATTCACTTCAG---CCCCATGCTGAAGCAGATTCAGCACAATATCTTCATGCCCTCCCCAGGCCGCTGCTCTCAGTGCAGTTCGGCTGTCAGCATCTGCACAGTCCACTTTGACTCCGGCATAAAGGAGCGCAGAAACTACCTCGGTGTGCCCACCCCATGC------------TGCGGATCTC---AGTGCTGTCCAGCCATCATGATCTGTGTGATTAACATTGGCCCCGCACCCTATCAAGCAATTCACCACTTTGGTGTGCCCCTGCCGTGCAGCTAAGGTAAGTGCTGTTTGACCATGAGTGTC ...:x:...x..x::.::.x:.xx.::....xx:....x..x.x::x.xxx.x....:.x.xx..x..x.x...xxx.xx....x:.xxx.:.:x..:x.......x:.....x..:xx..x.:.x.:xx:..xx..x::...:x:x...:x....:....:.:x.x:xx:..x.x:x:.:x.x...:..:x..xx.x..x.....x:::.x...x..:.x...:.::.:.x::..:..:.x:x.:..x...:xx:.x.::...xxx.x.::x....x.:..x:xxx..::.:..::.xx.x:.x.x.:.x..:x.:......xxxx..xxx:..:....x:::-:..:xxx.:.....:x.-.:.x.x...x...x:....x.:x.x.:.::x:.x.....x.x.....x..:.xx...:xx:..::xxxxx...::...x..:..::xx....:x.:x.xx.x..::..xx..x....::..:::..xx....-...x..x..x.:.:x.--------.x:.x.......x..-..:.....x--------.x:..x.:x.x..:x:.xx....:..x..::x.:.xx.x:x.....:-----.x:..:x::...:-------x.:.....----....:.:x:--...:...x:xx:x.xx..x:x:.x..:x..x:.x..x....::..:..x:.x.x..::::x::x..x...:x:..x.x:..::xx...x--.:...x.:x...--.....:x....x....:xx...:x......xxx...x.x.:...x.x...:.:xx.x..x:xx....x:..x.xx...:x:.xx......xx::...x:....-.....--...:x.x:.x:..------------------.......x..x..xx:...xx:::x:.:...xx.......x::.xx..:x..xxxx.::....::xx.x:...x......x.:........x.xx.:..x...x.x...x.:......x.:x.x..::..x..x.---....x.x:x......::.:x.x...---...xx....:...:.x:....x...:.:xx.....x...:xx..::..xx:...xxx.:::..:....:::.x..xxx..x..xx.:x:x:xx...x..:xxx.:......x::x.x...------------...:.x.x:x---.....x....x.......xx...:x::.....x..x.:x..:..:::x:.:.x:.:.::x.:...x.::.:xx.:..:...xxx::...x...:xx:.x.:x..x...:x...x.x.x.:.. 344M1I17M1D132M1I16M8I15M1D9M8D47M5D13M7I8M4D9M2I89M2I12M2D103M1D5M2D13M18I135M3D25M3I120M12D10M3D122M 683/1244 54.9% 1286/94230402 0.0% 84/1244 6.8% 84883183 NA +6329 chr4 + 190214555 124670020 124670019 124670891 872 GCTGCAACACGCATAGCAGTGCGTCCAAATTGATCAGCATGGTTTGGATC-AGCACCATGCTCTAATAAGACCTGAACAACATCAATGTGCCCTTCCTGGGCTGCAATACAGAGTGCAGTTGCACCTTGGTTACATGTATGGTCAACTACAGCACCATGCTCAATCAGAAGCTGAACCACTTTTACATGGCCCTGCCAGGCTGCAGACTGCAAAGCAGAGCGCTTTTCATTGTCTGCAGCATTGACGTCAGCATGGTATGCTATCAGGACCTGCACCATTTCCATATGGCCTTGCCAACAAGACACATGAAGTGCTGTCCTTCCTTCAGCATCACTTGCTTCTACGTTTGCACCATTTTCTAAAAAATATTCGGCCATTGTAAGCTGATTTTCTAAGGCCAAGATATAAAGTGTAG---------------GCCGACCATCAGCATCTTTGCAGTTAACATCAGCACCATGGCTAAAAAGCAATTCAACAATGTCCCTGTGCCCTTCTAATGCAGCAACCCGCAGTGCATTTCTTCCATCATAACCTCTTTGATCAATGTTGGATTTGTTTTCCAGTAATATTTGAACACAATCATAATGACCCTCTTGTGAAGCTAATATGAAAGGGATTCGTCCATCATTGTCAATCTCATTTGTTCTAGCACCTTGTTCAATAAGTGCTTCACATATCAATCTGTGCCCTTCAAAAGCTGCCATGTGCAAAGGTGTCCATCCAGCATCATCTCTGTGATTTTCAT----CTAACCCTCTATCCAGTAGAGTACGTACCACCTCAACATTTCCTTGTGCTGAAGCTATACTGAGGACTGTCCTACCTTCACTATCAATACTATCCACAGCTGCACCCCAAAACAAAAGTGTATTTACAAC chr4 - 94230402 39787233 39787232 39788119 54442284 54442283 54443170 887 GCTGCCATATGCAAAGGTGTCCAGCCTGCATCATCCCTGTGATTTTCATCCAGCCCCCTG-TCCAGCAGAGTCCGTACTACTTCAACATTGCCTTGTGCAGAGGCTATGCTCAAAACTGTTCTCCCTTCGCTATCAATGCTATCAACAGCTGCACCCCAAAATAAGAGAGTATTTACAACCGAGGCATGGCCCATGGAGGCTGCAGCCAGGAGTGGCGTACGACCATTGTTATCTGTGTGATCCACATCTGCTCCTCCCTCCAGGAGCAGGTCAACAACATCCACATGTCCTTCGTAAGCAGCCACCAGCAGCGGTGTCATGCCATCCTTATCACAGTGGTCAACTTCAGCACCTCGGTCAATGAGAAGGCTGACCACCGAGGCATGCCCTTTGCTGGCTGGAACGCAGAGTGCAGCAACTGACAATGCTGTCCTTCCATCCACATCCTCGTGGTTCACCTCTGCACCATGATCCAGCAGGTGCTCCACAATCTCTTTATGCCCCATATATGCTGCTGCAATCAAGGCTGTTCTGCCTTCGTTATCAGCCTTATTCACTTCAGCCCCATGCTGAAGCAGATTCAGCACAATATCTTCATGCCCTCCCCAGGCCGCTGCTCTCAGTGCAGTTCGGCTGTCAGCATCTGCACAGTCCACTTTGACTCCGGCATAAAGGAGCGCAGAAACTACCTCGGTGTGCCCACCCCATGCTGCGGATCTCAGTGCTGTCCAGCCATCATGATCTGTGTGATTAACATTGGCCCCGCACCCTATCAAGCA----ATTCACCACTTTGGTGTGCCCCTGCCGTGCAGCTAAGGTAAGTGCTGTTTGACCATGAGTGTCTTCTACCTCTAAATCTGCTCCCCTGGAAACGAGCAAGTTAACTAC .....x.:.:...x..xx..x.:x..x:xx.x...xx::..:...xx...-...x..x..-..:.::.::::.:.x..x..x....::.xx....x:xx:.xx..x..:.xx.:x:.x...x:x....x.:..:xx:.::x:.....x:.x.....x::xxxx.xx...:xx.xx..x..:xxx:........xxxx.........x.x.x.:x.xx.x:..x::x.::..:....::xx..:x..:..x..x:xx:x:x.:.xx..x.xx.xx..x.:x....:...x....xx:..xx..x...xx.x..:.x....x.x..x..xx:.....xxxxx..x..x.:x.....x:xx..x.x:.:.x:x::.:...::.x::xx..x::..:xxx...::::.:::.:....:..---------------x..xx.....x:....:.:.::...x..x..x........:::x.:x..xx::..x.....x..::.:.....:x:xx....x..x:.xxx..:x..xx....x..x..:.x.:.xx::.x..:x.:x.::.x::::.x:.xx..:.:xx.:x.x...xx...x.x...x..::.:::x.xx...:x.x.x.:x.x::....x.::...x::..x::x:x:.::::.:.::.x..xxxx.x..x:..:..xxx.xx..:.xxxx.......x:.xx.x.....x:xx:x..:x.x......x...x...x....x.......xx...----.:x:.x.:.....x..:.----.:x:.....:.:::::.x:..:..:xx..x.....x:x.:..x:....::x...x.x.x.:..xx:xx:x..:.x.x....x....x::.x.x:..::x:..x..x.. 50M1I9M1D355M15I327M4I18M4D108M 452/867 52.1% 887/94230402 0.0% 25/867 2.9% 84882787 NA +5877 chr4 + 190214555 124671072 124671071 124671665 594 AATTAAAAGGCTA---ACAACTGATGCGTGCCCTTTACTTGCAGGCACACAAAGTGCAGCTACAGAGAGTGCAGTCCTGCCATCAACATCCTCATGATTTACTTCTGCTCCATGGTCCAGTAGGTGTTCCACAATCTCTCTATGTCCCATGTATGCTGCTGCTATCAAAGCAGTTCTACCTTCATTATCAGCTTTGTTCACTTCAGCGCCATGTTGTAGCAAATTCAGTACAATATCCTCGTGTCCTCCCC---------------ATGCTGCTGCTCTCAAAGCTGTTCGGCTATCAGCATCTGCACAATCCACTTTTACGCCAGCATAAAGTAGTGCAGAAACTACCTCAGTATGGCCACCCCAAGCAGCAGATCTTAATGCTGTCCAACCATCTTGATCAGTATGATTAATATTTGCTCCACACCCAATCAAA--CAATTAACCACCTTGGTATGTCCCTGTCTAGCCGCTAGAGTGAGTGGTGTATGTCCATGAGCATCTTCTATCTCTAAATCTGCTCCCCTAGAGACAAGTAAATTGACTACATCAAGACTGCCACTATATGCAGCATTAGCCAATAATGTTCTCCCATTTGAATCACACTGATTTAC chr4 - 94230402 39787391 39787390 39787987 54442416 54442415 54443012 597 AAATAAGAGAGTATTTACAACCGAGGCATGGCC----CATGGAGGC--------TGCAGCCA---GGAGTGGCGTACGACCATTGTTATCTGTGTGATCCACATCTGCTCCTCCCTCCAGGAGCAGGTCAACAACATCCACATGTCCTTCGTAAGCAGCCACCAGCAGCGGTGTCATGCCATCCTTATCACAGTGGTCAACTTCAGCACCTCGGTCAATGAGAAGGCTGACCACCGAGGCATGCCCTTTGCTGGCTGGAACGCAGAGTGCAGCAACTGACAATGCTGTCCTTCCATCCACATCCTCGTGGTTCACCTCTGCACCATGATCCAGCAGGTGCTCCACAATCTCTTTATGCCCCATATATGCTGCTGCAATCAAGGCTGTTCTGCCTTCGTTATCAGCCTTATTCACTTCAGCCCCATGCTGAAGCAGATTCAGCACAATATCTT--CATGCCCTCCCCAGGCCGCTGCTCTCAGTGCAGTTCGGCTGTCAGCATCTGCACAGTCCACTTTGACTCCGGCATAAAGGAGCGCAGAAACTACCTCGGTGTGCCCACCCCATGCTGCGGATCTCAGTGCTGTCCAGCCATCATGATCTGTGTGATTAAC ..x...:..:x..---.....:..x..:..x..----.x..x....--------......:.---:.....xx..x.x:....::x:...:x::....::..x........x:xx.....x..xx.x..x....:x..:x:......:x:...x..x..::.:.x..:x.xx..:x.:..x..x......xxx.x..:x........:..x:.x.xx.xx.:.xxxxxx..x.:xxxxx.:..:...::x.---------------:...x..x:..xx...x.....:.xx.:...x:....:x.::::.:...:.:.:.:...xx..xx..:..xxxxxxx..x.:...xx....x..xx:x:.x..x..x.xxx.:..x.....:.x:..x..x.x.....:x.x...x.:x.:x..:...::.:x..x..:.--..::xx.x:.:...--:...:..::x:.x:......:xxx.x....xx..x:.x.::.x.......x.xxxx..:.xx.:x:....xx:.x.:.x:..::x.xx:.....x..::x::xx....:x:....x..:xxxx:..:.:x...:.xx....:xx:...xxxx.....x.. 13M3I17M4D9M8D8M3D186M15I170M2I14M2D160M 324/577 56.2% 597/94230402 0.0% 37/577 6.4% 84883681 NA +15038 chr4 + 190214555 124678652 124678651 124678916 265 ATGGCAGTAAGTAATTATGCTT----------------ACCAGTAAACATTTTAGTAACAGCCTTACTCTGCTTTCGGGCAGAACAGAGAAGCAATAGCCATGGTGGAAAGAACTCATGGTGACCAGCTAAAAGTGCTGCAACAGTCCCAGATAAGCTGGTAGACGTTTGTTCACCTTCAGTAATGTTACACCCTTCATCAACAGAATCAACAAGCAGGTATAGGCTTTGCTGGGGAGGCTTCATTCCCAGAAGAGGGAGTAGAACACACCTGTAAAACAC chr4 - 94230402 39796648 39796647 39796928 54433475 54433474 54433755 281 ATAGAGGGAGGTAATGATGCTTCTTGGGGTCTGCACTCACCTGTAAACATTTTTGTAACAGCTTTACTCTGCTTGCGGGCAGAACATAGAAGGAGCAACCAGGGAGGGAAGAACTCAAAGTGGCCAGCTAATAGCTCTGCTATCGTTCCAGATAGACTTGTAGACGTCTGTTCACCCTCAGAGACGTTGCAGCCCTCATCGACTGAGTCCACGAGCAGGAAGAGACTCTGCTGAGGGGGCTTCATTCCCAGAAGAGGAAGCAGAATGCACCTGCAAGGAAC ..:.x:.x.:.....x......----------------...x...........x........:...........x...........x.....x.::.:...x..x..:.........x:...:........x..:x....x.:x..:.......::..x........:........:....x:.:...:..x..:.....:..x..:..x..:......x.x..:..:.....:..:....................:..:....::......:..::x.. 22M16I243M 207/265 78.1% 281/94230402 0.0% 16/265 6.0% 84882004 NA +3011 chr4 + 190214555 124683038 124683037 124683091 54 TAAATTTTATATATATACACACACATACATACATATATACACACACATAATGTA chr4 - 94230402 45271680 45271679 45271733 48958670 48958669 48958723 54 TAACTTCCATATCTATATATACACACATATATATGTATACAAACACACAGTGCA ...x..::....x....:.:.....:.:...:..:......x.....:.:..:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 79411358 NA +3295 chr4 + 190214555 124703287 124703286 124703357 71 TCTGTAAATGTGTAGAGATGAACGTTAGATTTCAGCAAGCTAGGAAGAAACTGATGGGGAAGAGGAAGGGA chr4 - 94230402 69492232 69492231 69492302 24738101 24738100 24738171 71 TCTGTAAATGTGTAGAGATGAACATGAGGATATAGTTACATAAGACATTACTAATGGGAGAGAGCAAAGGA .......................:.x..:x.x:..:x.xx..:..x:xx...:.....::....x..:... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 55211055 NA +46961 chr4 + 190214555 124709989 124709988 124711291 1303 TTTATTGTTACCTTTTAAATGCTTCGGCTGGGTTTCTCTCGCACTCCCCAGGCTGTAAGAGGCTTTGGACTGCTGGATCCCTTAGCTTGTCCTCATATCCTTGGAGTAGTCCACTGCGGCAGATCTGGGCTACTAGACCTCTAATAAACCCTCCAACACACAAAGTATCAGAGTCCTGGGCTTTGCAGAAATGAAAGGCCAAAGCTTGGCGATGTAAACCTCTCTGCAAACTTGCAGGTGAACTTGGCCATAAGAGTTCAGTACATAGGGCCGTCTTGCCACTGCCAGGCCCTCCTACCAACAACACACCCCAGGCAGCTCCCTTTCCAGAGACACCACTAGCATTATTCCCAGAATTCATTACAAGTGATGGTGCATTGACAGCACTATTGCAGCAGTTACTTTTCTCCTGGAGGCAATGCTGAAGCTTGTGGAAAACCCACTCCCTACAGTAAAACTGCTTCCCTTGCAGTAAACTGGTTTGAGCCATTTTGCAGACTTTCTCTTCCCAAGGATTAGTCATAACGGGTTTTTTATCTTC-ATTTGCTAGAGTCTGGATACATCAACACAGGTCTTTCCATCCATTATGACATAACTTGTATATTAAGTTGACTCTGAAGAC--AGAGTAACTAGTTA-------CAGTAAAATTCAACAGCCACAGAGTTCCTCTGTCAACAGAACGTGCATGACTTTATTTGG-TTCCTTATTCTTGATCAGCAGT-CTATGTATTAGTTGTTGAACTG-----AGGGAGAAACGCCTGATTCCACAGCTCAGCAACACTTTTCCTAAATTTTAATGAGTCACATAACTCCATGGTTATAACTGGAGTTTATGTGATTGTGGATGTTTCAAGAACAGAGATGAGACAATACATGTGG-AAAACTAAAGAAAAAACCCAATCTTTCAATTTGTACAAAATGCTTCTCCAGATTCCAAGTGTTAATTCTGCATCTGACAATTAGATTCTG-AAAAGAGGTCCACTGCATTAAATGGCATCAGAGAGATTACATTTATACGGTATG------------------------AGGTACAGTATGTAAGTAGCTCTGTATTTCTCGTTGAAGGATGATCACTCAAGAGTACTAGATCGTGCCAGTTTCAGGCATCTGGGCAACTG-CCAGGAACTGTTTCAGATTATAGTCTCTTATGTGGCAGAAAT-------GACAACCACTGTTAACACCTTCTTAATTCAAAGCATTCATAATATGCATTTTTCAAGACAGCAGATTCTTAATGAACCTGTTCACAGGTTTCTTGGTTTTAAGACGTCCGGGTAATCAACAATTTCCACAAGTAA-CTAAAATAAAACAAACA chr4 - 94230402 39819665 39819664 39820974 54409429 54409428 54410738 1310 TTAGTTTTTACCTTTTAAATGCTTCAGCAGGGTTCCTCTCGCATTCCCCGGGTTGCAAGAGGCTTTGAATAGCAGGATCTCTTAGTTTGTCCTCATATCCCTGGATCAGTCCACTGCGGCAGATTTGTGCAACTAAACCTCTGATAAACCCTCCAACACACAGCGTGTCGGAGTCCTGGGCTCTGCAGAAATGGAAGGCTAGGGCTTGCCGATGTAAGCCTCTTTGTAGGTTTGCAGGTGAGCTTGGCCAGAGTAACTCAGTACAGAGGGCTGTCTTCCCACTACCGGGCCCTCCTACCAACAATACACCCCAGGCAGCTCCTTTCCCAGAGACAACACCGGTATTATTCCCAGAACTTGCTACAAGAGATGGTTTGTTGGCAGCACTACCGCTGCAGTTAGCTTTCTCCTGAAGGCAGTGCTGAAGCTTGTGGAAAACCCACTCCCTACAGTAAAACTGCTTTCCCTGCAGCAAGCTGGTTTGAGCCATTTTACAAAGCTTCTTCTCTT--GGACTTGTCATAAGCAGCAGTACACCTTCAACATCTTAGCGCAGGGA------GGCACGGGTTCATCT-TGCACAGGAAGATCTTCTGCTCA-GAACTTGAC----AAGGCGTAAAATAATCAGTTAACCTTCCCCATAACACTTAACAGCA-------TCTTCT-----CGCAAAGGGCGTCACTCCATTTGGATGCGGTATT----ACAAGTAGTGAAACACAATCACAGCTCAGCTGACATCATGAAGCAGCATCTGACACCAGCGCTCAACAATACTTCTCCTATGGCTCAGAAGTCCATACAGCTCCATGGCTACATCTGTAGTTTAAGCAGTTGTGCACGTTCCCAGTATACAGGGGAGACACTACATCTGGAAAAACTGAAGGGAAG--CCAGCTTTTCAATGTATACTAAATGCCTTTC--AACTCTAGGCATTAATCTCTC--CGGATA--TAAATCCAGAAAAAGCTGTCCATAACA--AAATGCTCCTGCTGGGAAT---TTTATACAGAAAGCAATTCTTCTTCAGAGTACTAGATAGATACTCCAAACATGTGGATGTGCACAACTTACTGAGAAATGGTCAGTTTGGA-CAAGGAACTTTGCAGACTTCGTATATCTGGGCAAGCGTCTCAGAATTACTTTGGATTATGGTTTCTTAGGCAGTAGAGATGAAAGGGGAAAAAAAGTGTTTACAACTTCTCATTTCAGTACATTCGTAA-GCGTCTTCTTCAGCAACCTGGATTCTTACTGAACCTGTTCTCAGGTATCTTAATCGCAAGATGTCAGAAGAGACAACATCTTCCCCTAGAGCTCTGAAATAAAGAAGACA ..x:..x..................:..x.....:........:.....:..:..:...........:.:x..x.....:.....:..............:....x:.................:..x..x....:......:...................:x..:..:............:..........:.....:.::.....x........:.....:..:.:::..........:........x.:x.::........x.....:.....x.....:..:.................:.................:..:.........x...::.:.............:.:::......x......x::...:........::..x.......x:.........:.....:............................................:..:.....:..:.................:..:.x:....::..::--...:.x.......xx:.:xx.x:.:....-.:x.x:...x.:xx...------::...:...::x..:-.x..:x:x:.x..xx::..:x:.-x..x.....----...:.--.:.:...::.....-------.x:...x.:.:......x-------..:...-----.:x..x.x..:.x...::......-.x.xx....----.:x..:...-xx.:::.x.x::x.:.x.:...-----.x.:..x.:.::....:x...xx.....:...:....:.....x:x:.:.:x::x:..:.:.:........:..:.x...x......x.:::.....x.:...:.x..x.:.x..:x......x.....x...-......:...::..:--...:::.......x.:...x......:.:..--:.:..:.:.::.....:::x.--.x..:.--..:..:.x.-.....xx.....:x:..--.....x:x:::xx.:..x.---.......:.x.x.------------------------..:...xx:.x::.x..:.x.x..:.:xx..:::...:::...:...x.:x:..-:.xx::.::x...x:::...:x::..........x:.-.:x:...:.::..::......:..:.....x.::.:...:..-------..x..xx.x....x...x.....:.x....:x:.....:...-::.:x..:....:x.xxx::........x...........x.....x....::.:x:....:...x.::x.:x.....x:....x.x..x:x-..:.......:x.:... 510M2D29M1I17M6D15M1D23M1D9M4D5M2I14M7I18M7D6M5D24M1I9M4D9M1I22M5I133M1I15M2D31M2D21M2D6M2D9M1I17M2D19M3D13M24I54M1D37M1I42M7I42M1D92M1I17M 891/1258 70.8% 1310/94230402 0.0% 97/1258 7.7% 84890324 NA +3182 chr4 + 190214555 124715709 124715708 124715781 73 TATGTATATGTATATGTATATGTATATGTATGTATATGTGTATGTGTGTATATGTATATGTTTATGTATCAAC chr4 - 94230402 19704277 19704276 19704349 74526054 74526053 74526126 73 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTAC ..x:..:..:....:......:.x.:.......x:......:.......:x..x.xx:.....x.xx...x.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 105011432 85203123 +3130 chr4 + 190214555 124715715 124715714 124715898 184 TATGTATATGTATATGTATATGTATGTATATGTGTATGTGTGTATATGTATATGTTTATG--TATCAACCACCCATATC------AAGCTATATTTTATTTTTTCAACTAGCAGTCTGCATACTG-----TCCTTCAAAGGATAGTTACTTTGAATCTGGAAAAGAGTTATTACTGGCAGCCTTTCA--GATTTCCCCA chr4 - 94230402 19704277 19704276 19704462 74525941 74525940 74526126 186 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATATTTTCAGGAAAGTGTCCTCTAGGTTTATA-----CAGACTATATAATACTGTTTTTTTCAGACAATAACT-TTTCAAAACTGAAATGGTGTTCT-------AGTCTTTCATTAACTTCCTCA ..x:..:..:....:......:.x...:.....x:........:.:...:x..x..x:..--.x....:.xx.x....:------..:x.:.x:.:..xx...x:.-----...x..::...x.:-----.::....:.x:...::.-:..::..x...:..x:.x...x.-------..:......--:.:....:.. 60M2I17M6I21M5D14M5I17M1D23M7D9M2I10M 113/171 66.1% 186/94230402 0.0% 28/171 16.4% 105011438 85203117 +3041 chr4 + 190214555 124744657 124744656 124744713 57 AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGCGAGGGAGGGAGGGA chr4 - 94230402 7711349 7711348 7711405 86518998 86518997 86519054 57 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ...::x...........:...:.......:..xx:..:x:..x..........:.:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 117033308 73181247 +3483 chr4 + 190214555 124748480 124748479 124748577 98 CTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCAATTTAAAACT-CTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTTTT chr4 - 94230402 43081925 43081924 43082018 51148385 51148384 51148478 94 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGT-----TCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTT ..x..:...::.:..:..:.:.:......x.:...:..x.-----..:x.:..:...:x:....-..x.:...:...............x.x.:x.:.. 40M5D19M1I34M 65/93 69.9% 94/94230402 0.0% 6/93 6.5% 81666555 NA +3225 chr4 + 190214555 124748481 124748480 124748565 85 TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCAATTTAAAACTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081928 43081927 43082008 51148395 51148394 51148475 81 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTT----CTGTTTCTTTCTCTCTCTCTCTCT ..:...::.:..::...:.:......x.:...:x...::.x:.::xx:...x..:..----..x.:...:............... 57M4D24M 55/81 67.9% 81/94230402 0.0% 4/81 4.9% 81666553 NA +7912 chr4 + 190214555 124790556 124790555 124790827 272 GTGGGAGGAGAGAGTTGAGTACAATGTGTTTAAAACCCAACAATTTTCAATAATTGCTGCAATTTTCTGCCTGCTTAGTGAATGCCAACTGGAATCAGCATTACCTATGAAGTACAATGGTGGGTAATGTAGAGTGCCTTGC-CCTAATTATCATGGTTTAAGCCTTTAGATAAAAAATGTATTCAAGCAA-GTGTGTTTTTACTGTGTGCAGCCTATCAAGTGGAAAAGAGCATAGTTCTTAACAAGT--TACAATACAGG-------AATTCTTACTAAGA chr4 - 94230402 39857594 39857593 39857859 54372544 54372543 54372809 266 GTGATAGGAGTAGGGGAAGTACATTGCTTTTATATCATAATAGTTTTCAATAATTGCTGTAATTTTCTGTCTGTCTTGCAAATGCCAACTGAAATCTGTACAGCAAATGAAACATAATGGAAGATAATTTAAAATGCAACGCATATCATAATCATTGTTCAAGTATGTAGTTAAATTATATGGACAAGTAGCGTGTTTCATCGTAGTATGTAATCTATCAA----AAAAG-------------ACAAGCTGTATAATATAGGTGACAGCATTTCTTATCAAGA ...:x.....x::.xx:......x..:x....x.x.x:..:.:................:.........:...::.x.::...........:....x.:.:x:.xx.....::.:.....x:.:....x..:.:...xx:..-:x.x..x.....x...:...:x.x...x....xx..:.:xx....:.:-....x.:x.:::x..:..:.::.......----.....-------------.....:--..:....:...-------.x......::.... 142M1I48M1I29M4D5M13D6M2I11M7I14M 176/255 69.0% 266/94230402 0.0% 28/255 11.0% 84932962 NA +3388 chr4 + 190214555 124808573 124808572 124808648 76 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATAT---ATA-TATATATATATATATATATATATATATATATTCG chr4 - 94230402 56721715 56721714 56721794 37508609 37508608 37508688 80 AAAAAAAAAGAAAAAAAAGCATGTAATACATATATGTATTAAATACTATGTAAATATGTATACTAACATATATATGTTTG .........:........:x.x:x....:......:...---...-...:..x....:....:xx.:........:..:. 39M3I3M1I34M 59/76 77.6% 80/94230402 0.0% 4/76 5.3% 68086858 NA +3017 chr4 + 190214555 124808581 124808580 124808619 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 55370842 NA +7342 chr4 + 190214555 124811034 124811033 124811239 206 CTATGGTCTCTTTATGACCACTGGCTGTCAGTGCTGATTATAATTTAAATAGCACAGG-CAAAGGAAATTTAAATTTGAACCAGCAAATAGCTGTCATCAACACATTACTAAAACAAAGTCATTTGGAGGACCCAATGAAGTATATTAGCATTCAG-ACTCAGCAGGCTAAAAATGAAAATAGGCTGAATTTAAAATTACATTGTTTT chr4 - 94230402 39873109 39873108 39873316 54357087 54357086 54357294 208 CCATTTTCTGTCTGTGACCGCTGGCTGTCAGTGTCTGTTGTAGCTTAAATGATGTGGGACAAGGTAAATTTAAATTCAACCCAGCAAATGGCTGTCATCAACACATTACCGCCTCAAAGACATTTAGAGGATTCAGAGTAGCATAACAACAGCAAGCAATGTTCAGAACAAAAATCAAGAAGCAACCATGTTAAAAATATCACGTTTT .:..xx...x.:.:.....:.............::x:..:..::......::::::..-...:.x...........::.x.........:...................::xxx.....x.....:.....::..:x.x..:...x:.:..x:x..-.x.xxx...:x:......x..:.x:x:x:x.xx......x..:xx:..... 58M1I97M1I51M 138/206 67.0% 208/94230402 0.0% 2/206 1.0% 84937925 NA +3563 chr4 + 190214555 124870739 124870738 124870865 127 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCT----TTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:..:...:x.:....x....:.:..:x.x:.x:xxx:...:..xxx:.:.xx.x..:.:x..:......x..x:x..::----.x:.......:......x.:......x...:...:... 89M4I38M 80/127 63.0% 131/94230402 0.0% 4/127 3.1% 84652059 NA +3496 chr4 + 190214555 124870747 124870746 124870877 131 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:..:...:x.:....x....:.:..:x.x:.x:xxx:...:..xxx:.:.xx.x...::x:.:......x..x:x..:.xxxx.x:.......:......x......:.x.:.:.:..... 131M 79/131 60.3% 131/94230402 0.0% 0/131 0.0% 84652067 NA +4647 chr4 + 190214555 124870755 124870754 124870925 171 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTC-TTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 45185583 45185582 45185751 49044652 49044651 49044820 169 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC---CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x..........:.....-...:.:x.:..::.......:..xx:....:.---......:x...xx.x::....x..x::.x..:...:xx..x:..:.xx.....:x:...:..:.:...xx.:.... 60M1I32M3D76M 106/168 63.1% 169/94230402 0.0% 4/168 2.4% 79685172 NA +3718 chr4 + 190214555 124870796 124870795 124870940 145 TCTTTCTTTCTTTCCT---TTCTTTCTTTCTTTCT---TTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGTCTT chr4 - 94230402 28459063 28459062 28459209 65771194 65771193 65771340 147 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTC----AGTCTT ..x..:...:...x..---..:x..x..x......---:..:..x...x..:::.:.....:.:..xx.x.::x:.:..x....xx:.:.:...:.:..:xx::...x.x::.:..........x..:.:.......::.:----...... 16M3I16M3I103M4D6M 91/141 64.5% 147/94230402 0.0% 10/141 7.1% 96411733 93802822 +3022 chr4 + 190214555 124870844 124870843 124870907 64 TTCCTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTC chr4 - 94230402 66430314 66430313 66430377 27800026 27800025 27800089 64 TTCTTGTTTTTTTTTTTTCTTTTCCTCTCTTCATTTCCCTTGTTCCTTCACTAATCTTACTCTC ...:.x:...:...:.....:.::.......:x.....:.:x.......x:.xx...:x..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 58440530 NA +3174 chr4 + 190214555 124870860 124870859 124870926 67 TTCTCTCTCTCTCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 70081426 70081425 70081492 24148911 24148910 24148977 67 TTGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTT ..x...:.:.:.:......:.x:..x:x.xx.xx...:.:.......................::.. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 54789434 NA +3114 chr4 + 190214555 124870871 124870870 124870936 66 TCTTTCTTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 17623027 17623026 17623092 76607311 76607310 76607376 66 TCTCTTGCTCCAGACTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAG ...:.:x:...xxx.......:..:xx:.:::...:..............:.x....x........ 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 107247844 82966711 +3122 chr4 + 190214555 124870888 124870887 124870923 36 CCTTCCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 - 94230402 86355155 86355154 86355190 7875213 7875212 7875248 36 CCTTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTTT .....::............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 38515733 NA +3273 chr4 + 190214555 124870893 124870892 124870958 66 CTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGTCTTGCTCTGTCACCCAGGCTG chr4 - 94230402 15963380 15963379 15963441 78266962 78266961 78267023 62 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTT----CTTAGGCTG ..........:..........:::....xx...........:.x::...:.:.----.::...... 53M4D9M 48/62 77.4% 62/94230402 0.0% 4/62 6.5% 108907513 81307042 +3035 chr4 + 190214555 124870894 124870893 124870927 34 TTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:................................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 105940980 84273575 +3217 chr4 + 190214555 124870894 124870893 124870929 36 TTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................:.................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 105940982 84273573 +3015 chr4 + 190214555 124907109 124907108 124907162 54 TTAAATTACATATATACAGAGAGTAATGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406418 4406417 4406471 89823932 89823931 89823985 54 TCAGAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA .:.:.x...:......:..xx.xx.:...................x:....... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 120500691 69713864 +3100 chr4 + 190214555 124907111 124907110 124907175 65 AAATTACATATATACAGAGAGTAATGTGTGTGTGTGTGTGTATATATATATATACATATATAATG chr4 - 94230402 52579749 52579748 52579813 41650590 41650589 41650654 65 AAACTGCATTGAAATAACTCATAAGATACGTGTGTGTGTGTATATATATATATATATGTTTAATG ...:.:...xx.x.:.:xxx:...x:.::.........................:..:.x..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 72327362 NA +3048 chr4 + 190214555 124907205 124907204 124907272 68 ATGTATGTGTGTTTGTGTGTGTATATATATATGTATGTATGTATATATAAATCAACCTAAGTTCCTTT chr4 - 94230402 89821281 89821280 89821335 4409068 4409067 4409122 55 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTA-------------CAGCCTCAATCTCTTT ....:.....x.:...................:......-------------..:...x.:.::.... 39M13D16M 46/55 83.6% 55/94230402 0.0% 13/55 23.6% 35085924 NA +3010 chr4 + 190214555 124915623 124915622 124915722 100 ACATGGAGGATTTTCTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCA chr4 - 94230402 40100151 40100150 40100250 54130153 54130152 54130252 100 ACATGCAGAACAGTTTATTCTTTCTCTTCATGTGTTTAAGTTATTTCTGTATCTTCTCCACCCATTTTTTTTTTCTTTTCTTTTTCTAGACTAAATCTCA .....x..:.:xx.:.x........:.::x...x.:.xxx..x:..::x.x::....::x:::x..........:....:.....:x....x:::..... 100M 61/100 61.0% 100/94230402 0.0% 0/100 0.0% 84815472 NA +3436 chr4 + 190214555 124915628 124915627 124915690 63 GAGGATTTTCTTTTCTTTCTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTT chr4 - 94230402 10810503 10810502 10810565 83419838 83419837 83419900 63 GAGGACTTCCTTCTTTTTCTTTCCTTGTTTATTTCACTCTTCTATTGCTCCTTGCTTTCTTTT .....:..:...:.:........:......x....x:....::x..x:.:...x....:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 114105125 76109430 +3056 chr4 + 190214555 124946498 124946497 124946546 49 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGATTTTT chr4 - 94230402 27148400 27148399 27148448 67081955 67081954 67082003 49 CTCAAGAAAGAAAGAAAGAATAACAACAAAAAAAAAAAAAGAGCTCTTT .....:...:...:...:..x..x..x................x.:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 97798098 92416457 +3076 chr4 + 190214555 124948404 124948403 124948461 58 ATATTTTATATTTTCATCTTTATATCTCTCGTTATATTTTGTGAGGTTTTTTCCTCCT chr4 - 94230402 51765929 51765928 51765986 42464417 42464416 42464474 58 ATGTTTTGTGTTTCCTTCTTTATTTCTTTTGTTATAGTTCTTGACGTTTTTTCTCCTT ..:....:.:...:.x.......x...:.:......x..:x...x........::.:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 73182475 NA +3277 chr4 + 190214555 124982240 124982239 124982351 112 AAGATATGACTGTGAAGAAAAAGAAAAATCCGACAAA---------TGAGTTTTTAAAAATATAAAAGAAAAAGAGTGTTTTAAGAAAGAGAAGGAAATGGAATATTAGGTATAAAAAAAA chr4 - 94230402 68851642 68851641 68851762 25378641 25378640 25378761 121 AAGATGTGGATGCAGATTGAGAGAAAACAGCTACACAGGCATAGTTTGTATGTATACATATATTAAAAAAAAAATGTGTTTTAAAAGGAAGTAAGAAAAAAAGTACCAAGTATTAAAAAAA .....:..:x..:::.xx:.:......xxx.x...x.---------..x:.x.x..x.x....x...:.....:x.........:.:::..x.:....x::.:..::.:....x....... 37M9I75M 73/112 65.2% 121/94230402 0.0% 9/112 8.0% 56130598 NA +3127 chr4 + 190214555 124986899 124986898 124986955 57 TCTTTGTTTCTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTT chr4 - 94230402 21634158 21634157 21634214 72596189 72596188 72596245 57 TCTTTATGTTCTCTCTCTCTCTTTTTTTTTTTTGTATATCTTTTTTATAGCCCTCTT .....:.x.::...........:.:.:......x.x.x.:......x.:..:..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 103352741 86861814 +3257 chr4 + 190214555 124986909 124986908 124986943 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929913 18929912 18929947 75300456 75300455 75300490 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 106056996 84157559 +3164 chr4 + 190214555 124986910 124986909 124986955 46 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTT chr4 - 94230402 18929912 18929911 18929957 75300446 75300445 75300491 46 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTT .:...............:..................x.x.:.x:.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 106056998 84157557 +3121 chr4 + 190214555 124986912 124986911 124986959 48 TCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTTTGAT chr4 - 94230402 18929912 18929911 18929959 75300444 75300443 75300491 48 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTAT .:.............:.:.................x.x..:.x..x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 106057000 84157555 +3081 chr4 + 190214555 124986914 124986913 124987092 179 TCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGGCTCTCTTTGATAAGTTTAAAATAACTTGGCCCTAGTTTTTAACATAAAATGCGGTTTTTCAATCA-ATGACTGGTATAGACACTTGAAAAAAAATTAT-GTAAGTTAATTAAAGACTGAAAATAATATATATTCTT------GAATTTTGTT chr4 - 94230402 69795860 69795859 69796046 24434357 24434356 24434543 187 TCTTTCTCTCTCTTTTTTTCTTTTTTTCATTTTGACTTGTCTCATGCAGGTTTAAGTGTTTTAATGCCTCTTGTCACTGCAAAGTGTTGTCTCTTATTCATATTATTCATAAACCTCTCTGACAGTACATTTTGGTAATCCTTTCGCAGGCTGAAAAAAACCTGTCCTTTTAGCACAGAATCTTCTT ...:...............:.......:x.....:..:x::.::xxx..x..x..:.:x:..:::x.:xx..x.:.x:::...:..:x..:.:.:.x...-..x.:.x:..x.xx:x::...x.:x.x...x.-....x::xx.::x..:.......x..:x.:.x:.:..------....:..x.. 100M1I32M1I37M6I10M 105/179 58.7% 187/94230402 0.0% 8/179 4.5% 55191054 NA +3420 chr4 + 190214555 125014683 125014682 125014784 102 CCTTTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATAAAATATCAGGTTGGTGCAAAAGTAATTGCGGT---TTTGGATG chr4 - 94230402 48089487 48089486 48089591 46140812 46140811 46140916 105 CCTTGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATG ....x.:x.x...:x..x...:.:.::::........:....x.x..........:.:...x.x.:.xx.x:x.:...:..x.x.x.....::.---....:... 94M3I8M 68/102 66.7% 105/94230402 0.0% 3/102 2.9% 76925196 NA +9508 chr4 + 190214555 125056738 125056737 125057065 328 ATAAGAAATTGACTTTACAAAGCTATAAACTACTCTGAGTTTATGGGCTTTTGGAAATAATGACCTCCATTAGAGTTTGTAATGCATTCTGGGCAATATCATAAAAAATATGTCAGTAGAGTAATTT---CATCCTCAAAATGATCATCTTCTGTGAGTAATAAATTGCGTGCATATATTCATAAAAGACTCTCTGTGGAATATTCC-AAATTCATATGCACATACCT--TCACTTTGAAATTTTACAAGAAATGAATGAATTAGTA-CGTTTATGACCAGATTTCAGTTACCAC-----CAAAAAGACTATCTCTACTTCGAAAAATGTGCTTGTGTAG chr4 - 94230402 39964549 39964548 39964888 54265515 54265514 54265854 340 ATAATGAATTGGTTTTATAGGCCTATAAAACAACCTGAGTCTTTGGACATTTGGAAATAATGGTCTCAATTAGGATCGGTAATGTATTCTGTGAGATATCATAAGAAAAGTGGCAGCGTGCTTATTTTTCTCTTCTCCCGATGATCACCTGCAATATGCAATAAAATGCAAGGATGTACTCATAAAAGAGCCATCACAGTATCCTCCTTAATATATATGCAAATATTTCATCACTTTGAAACTTTGAGGCATATGGGAAAGCTGTTAGAAATTAAGATCAGCTTCAAGTTGCCATATAAATCAAAGAAATAGCTCTTTTCTAAATAAAGTATCTGCTTGG ....x:.....::....:.::x.......x:.x:......:.x...:.x.............::...x.....::.:x......:......x.x:.........:...x:..x...::x:x.x....---:x.:...xx:.......:..x.x:.:x.:......x...:x.x..:..:..........x:.x:::::.x..x:...-x...x:.......x...::.--...........:...:x::x.x...::x:.::.:x..-x:x...x..:...x..:x....:...:-----:x...::.x..x....x:.:::..x..x..:::..:x.:. 127M3I77M1I20M2I37M1I27M5I40M 211/328 64.3% 340/94230402 0.0% 12/328 3.7% 85092189 NA +3034 chr4 + 190214555 125057799 125057798 125057859 61 GTTTTGGCAATTTTTTAAAAATCAATGATTTTATCAGTATTTTATTTTACATTTTTATTAA chr4 - 94230402 69633485 69633484 69633545 24596858 24596857 24596918 61 GTTGTGTGAATTTTGCAAAAACCAATAATCTTATAAGTACTCTATATTTCATTTTCACTGA ...x..xx......x:.....:....:..:....x....:.:...x..x......:.:.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 55424314 NA +3475 chr4 + 190214555 125062140 125062139 125062201 62 TTAAAAAACAAAAACAAACAAAACAAAACAAAAACAAAAAAACTTGGCTTCCTCTTCCCTTT chr4 - 94230402 10256781 10256780 10256841 83973562 83973561 83973622 61 TTAAAATTCACAAAAAAACAAAACAAAACAAAAACAAAAAAACCT-GTATCCTCTCCATTTT ......xx..x...x............................:.-.:x......:.x:... 45M1D16M 51/61 83.6% 61/94230402 0.0% 1/61 1.6% 114805359 75409196 +11109 chr4 + 190214555 125091048 125091047 125091426 379 TATTATAAATACCCTATTTTATTTCCAGACTGG--------CAAGAAGCC----GCAGGAAACATGTTATTTGCTCCAATGCTTAGCTGCATTAAGCAGTAAAAGGCATTTGATTCAGCAAAGGCAGCTGGTGATATGAATGCAATGTAAACCACTATCATGCCTATAAAAAAAGAC---AGATTAAGTTCATAACTGTGGCCATAACTTTGGTCTAATAAAATAAAACAAAATAAGGCCCATTATGG-----TGTATTTATGGCCATCTGTTACTAAATCCTCCTTTTGGATGATTCTGGAACAG-CTTCATAG--CCTTCACACTGAGCCGGCTGTCTATGAAATGCAAAACTCAGAGGAATTAGAAAGACATTAAATGAACTCACATAACAAATGCAAA chr4 - 94230402 39973946 39973945 39974331 54256072 54256071 54256457 386 TATTTTAGGAACTTCTGTTTATTTCCCTTTTGGATTTTAAGCAAGTAGTTTGAAGCAATGTATGTATTATTTGTTCCACTAATCATCTCTATGAAGCTGTTA--GACATTTTATTCAGTAAAGGCAGCTGGTG------------TATTGACTAGTATCATAGCTATAAAAATAAAATGGAGCTTAAGATCAAAACTGTAGCAATAACCTTGCTCTAATAGCATAAAAAGAAATAGGACCCATTATGGATTATTTTTTTTATTGCCATCTGTCAC-AGTTTCCCTTTTTGGATGATTCTGGAACAGTTTTTGTAGTATCTTCACACTAAACAACTTTGGAGCAAGATGCAAGTCAGAATGAAGTGAGAGAG-CATTAAATCCACTTGTCTTGGAAGTGCAAA ....x..::x..:::xx.........xxx:...--------....x..::----...:x:x.::.:.......:....x.:x.:.x..x:..x....x..x.--.:.....x......:..............------------.:.x:..:.x......:x.........x.:.x---..x.....x...x......:..x.....:...x.......:x......x:.....:.:..........-----.x.x.....x.........:..-.:x.:.:.:.....................-:..::...--:.........:.:.x:x:.xxxx:::.:......:x.xx.:x.:.:.x...:..-........xx...:::x.x:x..:...... 33M8I9M4I48M2D29M12D32M3I68M5I22M1D30M1I8M2I54M1D30M 256/363 70.5% 386/94230402 0.0% 39/363 10.7% 85117102 NA +8268 chr4 + 190214555 125105205 125105204 125105779 575 AGAGTAATGAAGAAAGATACACTGTGCTCCTTGTCATTAAGAGACCCTTTGGCAGCACTGTAATGATTTTCTCTGACCTTGTGAATGCCTT----ATGGGAACTCTGTACACACTCATCTATCTACTTACTATCTTCAGAGTATCACTGAAATAGTTTCTGCACATTAATGAGACTTCAT--CACTTCAAAGGCATTTTTGAAAAAGAAAAATAGCTGAAGGTAGGAACAATTATATTTTTAGTATA------GTTGTATAATCTA-------AACAAAAAAGTACAGTAATTTTGAATAG----ACTTATTAGACTAAAAAAAGAATTAACTGGCTATTTAAAAAAAGAAAAAGGTGGGGACCTATC---ATCTTGGTTCTTTTA------TGTTTCTTCACCTTTAAAAGACAGATAAGATCAGAAGTGAAATAGAAT-------------GGCTGCTTTTGTTATGACAG-TAATGAGCTAGAACTGGACTAAATAGAAGAGACTGCAGATATGGGGTCACAGAGTGGTGAGACTTCATGAATTTATTCATTGAAATAT-GTCCATGTCCTCATAAAATGGGATGCCATCATTACATGTGTGGATTGCTTTGTTGCACA chr4 - 94230402 39979551 39979550 39980125 54250278 54250277 54250852 575 AGAGCAATAATGTAGGACAAAATGGGTTGATTTACTTTAAGAGAACCT----AAACATTGTGTTAATGTT----GACAGTGAAAATACTGCTGAAAGTGGAACACAAGACAAG-------GTTTTCTTGATAGCCACAGGATGTCCTTGGAACAGAGTCTGCATCTCAATGAG-CTTGATTCCACTCACAGTGCATT-----AGAAACAAATTAGTTAGACTCAAATGTAATTATAATGTCAGGGTATTTTCAGTTCCAAGATCCATCCTTCCAGTTAAGAACCACA----TCCTACACAGGAAAAATTGTCCTGCTTACAAATGCAC-AGCAGATCATTTGCAGGCCAAAAACAATG----CCTCTCGCCACCTTCCTTCTTCCACCTACGTGTTCCTTC-TGTTTAAAGCAC---------------TTAAAAAGACTTGCATCTCATCTCAGCTGCTTTTGTCAGGACAGCTAATGAGTTGGGGCGGGACCAG-TGGAAAACACAGTAGAAATGGGGTCATGGAAAGGTTAAACTTCATGAATTTATTCATTGGGATTCAGCTCGCGTCCTCCTGAAATGAGATGTCATCATTAAAATTGTGAATGACGCTGTTGCACA ....:...:.x.x.:..:.x.x..x.:.xx..xx.x........x...----x.:..:...:x.:..x..----...xx..x:...:.:x:----.xx.....x.x:x...x:-------:.:.x...:x..x.:x...::.:..x:..:..:..xx......:x.:......-...x..--....:xx.:x.....-----.:..:x...x...:.::.xx:.::x::.......x.x.:..x:..------...x:.x:...:.-------.::x..:..x:...----.::.:x.:..----.x..:.:xx:..x.x...x.x.:-.:.x.:::....:x.::xx:....x::..----...x..---.:...xx.....::.------....:....-:x......:x..---------------.x...x...x.-------------:...........:.x.....-.......:.:.::.x....:.:-.:...:.x..x.:...x.........::..:x...x.:.....................::..x:-.::.::......x.:.....:....:........x.xx....:..x:.x:......... 48M4D18M4D17M4I18M7D53M1D6M2I15M5D45M6I13M7I14M4D10M4I23M1D29M4D6M3I15M6I9M1D12M15D11M13I20M1I22M1D65M1I59M 345/528 65.3% 575/94230402 0.0% 94/528 17.8% 85125654 NA +3844 chr4 + 190214555 125116857 125116856 125116969 113 ACTTCTACAAGGAAGTCAAAAAAG--CAAAAAAGGGATATATATATATATATCCATATATATGCATATATATGGATATATATATATATATATATGCATATATATGGATATATATA chr4 - 94230402 19637071 19637070 19637184 74593219 74593218 74593332 114 ATTTTTACAGGGAAATGAATAGATTTCAGTAAATGGATACAGAAAGTTA-AGATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATA .:..:....:....:.x..x.:.x--..:x...x.....:.x.x.xx..-.xx::x...x.........x..x........:....x...x.......:.x....x....::... 24M2I23M1D65M 80/112 71.4% 114/94230402 0.0% 3/112 2.7% 105479786 84734769 +3655 chr4 + 190214555 125116959 125116958 125117070 112 GGATATATATATATATATGCATATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATATATAAAACCACATACTCTGGC chr4 - 94230402 8395784 8395783 8395893 85834510 85834509 85834619 110 GGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACAT--TCTGGC ..x:..:.:.:...:.:......x.:......x..:......:..:x..::.xx...:.:.:.:.:.:.:.:.x.:.:.x..:x...x.x.xx:x....:....--...... 104M2D6M 71/110 64.5% 110/94230402 0.0% 2/110 1.8% 116721175 73493380 +3139 chr4 + 190214555 125116960 125116959 125117070 111 GATATATATATATATATGCATATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATATATAAAACCACATACTCTGGC chr4 - 94230402 4417342 4417341 4417449 89812954 89812953 89813061 108 GATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT---GCCACAAACACTAAC ...x..x.:.......::..:.:.:.::x:x.:...::::..x.x..x..:.:..:...xx.x::..x..x.....:.:....x...x.....---:.....x..x..::. 93M3D15M 68/108 63.0% 108/94230402 0.0% 3/108 2.8% 120699618 69514937 +3442 chr4 + 190214555 125116960 125116959 125117052 93 GATATATATATATATATGCA-------TATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 33398777 33398776 33398876 60831527 60831526 60831626 100 GAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAt ..x.....:.:.:..::...-------....x......x..x.x:....:....:......:.:.......:.:.x.x.x.x.x.x.:.x.x...x.... 20M7I73M 66/93 71.0% 100/94230402 0.0% 7/93 7.5% 91718183 NA +3020 chr4 + 190214555 125116980 125116979 125117053 74 TATATATGTATATATATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 4481679 4481678 4481752 89748651 89748650 89748724 74 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .:...:...x.x:.....x............::.:.x.:...:.:..x:.:...:x:xx.:......:..:.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 120635301 69579254 +3920 chr4 + 190214555 125126350 125126349 125126497 148 ATATATATATACACACATATATGTCCGTGTGTGTGTATATATATACACATATATATGTCTATGTGTGTGTGTGTGTCTATATACACACACACACACTCACAGACGTAAATGTATACAACATATATGTATACAAACCATGTTTTTGTAA chr4 - 94230402 8395756 8395755 8395895 85834508 85834507 85834647 140 ATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA--------ACCCAAACTACATTCTGGCAA ..x.:..:.....x.x:x.x..x:..xx.xx::...:.:...:.:::....x.:....x.x.:::.:...:..:x.x:..xx.:............x.......::.....x...x..x--------.:x.....:.::..:.x.:.. 119M8D21M 88/140 62.9% 140/94230402 0.0% 8/140 5.7% 116730594 73483961 +3115 chr4 + 190214555 125145451 125145450 125145571 121 TGTGATGTGGCAGTTTACACAGAGAAATAAATAAAAAAAAAAAACATGAAAACAAACAAACAAAAAACACCTT-------------------GTAAATTTGGCCAAAATGAAAATACACTCATATTTTAT-ACTTGTCTTC chr4 - 94230402 20572439 20572438 20572579 73657824 73657823 73657964 141 TGTTATGTGTGTATTTTCAAACAGAAACAAAGCAAAACAAAAAACAAGTAAACAAATAAACAATAGCAACCTTACTGCCCCTAACCCTAACCATAACTCTGAGTTTAATAATAATATACTAATGTAGTATGGCTTCTTTTC ...x.....xxx:...x..x.x.....:...xx....x........x.x.......:......x.:xx.....-------------------:...x.:..:x:xx...:.x....:...x..:.xx...-:...x.:... 73M19I38M1I10M 84/121 69.4% 141/94230402 0.0% 20/121 16.5% 104573012 85641543 +3067 chr4 + 190214555 125180499 125180498 125180555 57 AGAAAGGAAAGAAAAGGAAAGGAAAGGAAAGGAAAAAAGAAAAGAAAGAGAGAGAAA chr4 - 94230402 3302522 3302521 3302578 90927825 90927824 90927881 57 AGGAGGAGAAGAAAAAGAGAAAAATTGAAAGAAAAAAAAAAAAGAATGGGGGAGGAA ..:.:.::.......:..:.::..xx.....:......:.......x.:.:...:.. 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 121877977 68336578 +3684 chr4 + 190214555 125180516 125180515 125180746 231 AAAGGAAAGGAAAGGAAAAAAGAAAAGAAAGAGAGAGAAAGAGAGAGGGGGAGGGAGGGAGAGAGGAAGGAAGGGAGGGAAAAGAAAGAAGAAAAAGCAAGCAAGCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAAAGATGGGAGGGAGGGAAGGAAGGAAG chr4 - 94230402 56098324 56098323 56098554 38131849 38131848 38132079 231 AGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAA-AAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGAGTCAAG .:..:x...x.:x:::.x.:x..:...::.x:....x..x:.::...:x.x:x.:xx.x.x.x..::...x::..x...x......::...:xxxx.x:...x:.x...-...xx:...:::xx.::.xxx.:.x....:...-...:..xx.:....x.:...::...:....:..:.:x:....:.:.::.:....x...:::..xx::::...:.:xx..x..:xx... 109M1D33M1I88M 125/230 54.3% 231/94230402 0.0% 2/230 0.9% 69082192 NA +3777 chr4 + 190214555 125180543 125180542 125180620 78 AAAGAGAGAGAAAGAGAGAGGGGGAGGGAGGGAGAGAGGAAGGAAGGGAG--------------GGAAAAGAAAGAAGAAAAAGCAAGCAAG chr4 - 94230402 76099077 76099076 76099168 18131235 18131234 18131326 92 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAG .:...:......:::.x.....xx:.........x..:....:.....:.--------------....:....::.x......:.:...... 50M14I28M 59/78 75.6% 92/94230402 0.0% 14/78 17.9% 49081466 NA +3439 chr4 + 190214555 125180604 125180603 125180720 117 AAGAAAAAGCAAGCAAGCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAA chr4 - 94230402 30533165 30533164 30533281 63697122 63697121 63697238 117 AATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAA ..x......x...x...x.....:.::...:.:.:.xx:x....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.......:.:x:xx:.....:x:.:... 117M 71/117 60.7% 117/94230402 0.0% 0/117 0.0% 94647439 NA +4090 chr4 + 190214555 125180622 125180621 125180779 158 AAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAG-AGAAAGACAAAGAAAGATGGGAGGGAGGGAAGGAAGGAAGAGAAAG---AGAAAAAGGAAGGAAGAAAGAAGGAAG chr4 - 94230402 29503820 29503819 29503981 64726422 64726421 64726583 162 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAATGTAGG .....:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x:x..:x..x.:x:..-......:..xxx...:x.:x....:.x:..:x:...:.xx.....:---...:x..:.:.x......::.x.x.:. 85M1I46M3I27M 97/158 61.4% 162/94230402 0.0% 4/158 2.5% 95676802 NA +3018 chr4 + 190214555 125180628 125180627 125180732 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAAAGATGGGAGGGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:...:x..x..::.:...x.x:........x.:..x:.. 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 63845927 NA +3072 chr4 + 190214555 125180635 125180634 125180718 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x.:::.....x.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 88322341 NA +3024 chr4 + 190214555 125180640 125180639 125180744 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGACAAAGAAAGATGGGAGGGAGGGAAGGAAGGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x:::.:.x.x......x..:.:::...:..:...:.:.:.::::..x:.. 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% 63845939 NA +3049 chr4 + 190214555 125180878 125180877 125180932 55 AACAGCATTCAGAAAATGGTCTAAAATATGTAGAAAATAATTTTCAACAAAAATA chr4 - 94230402 55447136 55447135 55447190 38783213 38783212 38783267 55 AATGGCATATAGAAAATGGACTAAAATATTTTGGAAATGATTTTAAACGAGAACA ..::....x:.........x.........x.x.:....:.....x...:.:..:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 69733742 NA +3228 chr4 + 190214555 125184898 125184897 125184957 60 ATACATAGACACACACACATATATACGTATACACATATATACACACACACATATATATAC chr4 - 94230402 17520753 17520752 17520812 76709591 76709590 76709650 60 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...:...:.....x.:...:...:.:..:x.::.x.:....x.....::........... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 107664145 82550410 +3087 chr4 + 190214555 125234826 125234825 125234947 122 ATATGCCAGTAGAACTGGGTTTTAGCTTTGACCTCATTTATACAAATCCAAATGTACATGAATAAAAGTTAAAAGTGGTAATCAAT---------AAGCTTCA--CTAAAATATTAATTTTTAAAAATATTTA chr4 - 94230402 37013615 37013614 37013747 57216656 57216655 57216788 133 ATATGACAGTGGAAGTGGGCTTTCTTTTCTGTCTTAAATAATGTAGCCTAAATGCACATAAATAAAATACAAAAATGATAACGAATTGATTTGAAAATCTTCGGCTTGCAATACTTAGTCTTTGGAATATGTA .....x....:...x....:...xx:..:x::..:.xx..xxxx.::.:.....:....:.......xx:....:..:...:x...---------..x....:--:.:x....:.x.x.:..x::.....x.. 86M9I8M2I28M 79/122 64.8% 133/94230402 0.0% 11/122 9.0% 88221211 NA +3255 chr4 + 190214555 125307574 125307573 125307637 64 TATATATATATATGGACATATGTCTATATATATATATATACACACATACACACACACACCCACA chr4 - 94230402 8395793 8395792 8395856 85834547 85834546 85834610 64 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA .:...:.:.::..::....:.:.:..:....:...::x....:xx..............x.... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 116911781 73302774 +279192 chr4 + 190214555 125316615 125316614 125321649 5035 CGGCTTCACCTACAGGCTCAGCGAAAGCCACGCCCTGTTTGCCATAAACAGTAGCACCGGAGCCCTGTACACCACCTCCACCATCGACCGCGAGAGCCTGCCCAGCGACGTGATCAACCTGGTGGTCCTTTCCAGCGCGCCCACCTACCCCACCGAAGTGCGAGTGCTGGTGCGGGACCTCAATGACAACGCCCCCGTTTTCCCGGACCCCTCTATCGTGGTCACTTTCAAGGAAGACAGTAGCAGCGGACGCCAAGTCATCTTAGACACCGCCACCGACTCGGACATCGGCTCAAACGGTGTGGACCACCGCTCCTACCGCATCATCCGCGGCAATGAGGCGGGGCGCTTCCGTCTGGACATCACCCTGAACCCGAGCGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCGTGAGGTCACTCCGCAGTACCAGCTCCTGGTTGAGGTGGAGGACAAGGGTGAGCCTAAGCGGCGGGGCTACCTTCAGGTAAACGTGACTGTGCAAGACATTAATGACAACCCCCCGGTTTTTGGCAGTTCTCACTACCAGGCGGGGGTGCCTGAGGACGCGGTTGTGGGTTCCAGCGTCCTCCAGGTGGCGGCGGCGGACGCGGACGAGGGCACCAACGCGGACATCCGCTATCGCCTGCAGGACG------------------AGGGGACC---------CCCTTCCAAATGGACCCTGAGACGGGACTTATCACGGTGCGGGAGCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCTCACTGGGCGCGCCGAGGCGCTGATTCAGCTGCTGGACGTGAATGACAATGACCCGGTAGTGAAGTTCCGCTACTTCCCGGCCACCTCGCGCTACGCCTCGGTAGATGAGAATGCTCAAGTGGGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTTGGACCGCGAGCGCATCCCTTCCTACAACCTCACAGTTTCCGTCTCTGATAACTACGGGGC---------GCCCCCTGGC---------------------------------GCAGCAGTCCAGGCG---CGCTCTTCTGTGGCAAGCCTGGTGATTTTTGTTAATGACATCAATGACCATCCTCCTGTCTTTTCACAGCAAGTGTACAGAGTGAACCTGAGCGAGGAGGCGCCTCCGGGAAGCTATGTGAGTGGGATATCTGCCACTGATGGCGACTCTGGTCTCAATGCTAATCTGCGTTACAGCATTGTCTCTGGCAATGGACTGGGATGGTTCCATATCAGTGAACATAGCGGCCTCGTGACCACTG--GGTCCT----------------------CTGGGGGC------------------CTGGACCGTGAACTTGCTTCCCAGATTGTTCTGAATATAAGTGCCCGGGACCAGGGAGTTCACCCCAAGGTGTCCTATGCCCAGCTTGTAGTAACTCTCCTAGATGTGAATGATGAAAAGCCAGTATTTAGCCAGCCAGAAGGGTATGATGTGTCTGTGGTTGAGAATGCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAGTGCGCTTCTCCTTACAAGAGGCAGAGAC--------TGACCGGAGGTCCTTC-------------------------CGTCTGGATCCTGTGTCTGGGAGGTTGAGTACTATTTCCTCCTTGGACAGAGAAGAGCAAGCCTTCTACTCCCTGTTGGTTCTGGCCACAGATCTGGGCTCCCCTCCCCAGTCATCAATGGCTCGCATAAATGTGAGTCTTCTGGATATAAATGATAACAGCCCTGTCTTCTACCCGGTCCAATACTTTGCTCACATTAAGGAGAATGAGCCTGGAGGTAGCTACATCACCACTGTGTCTGCCACTGACCCAGACTTGGGTACCAATGGTACTGTCAAATATAGCATATCTGCTGGGGACAGGTCTCGGTTTCAGGTCAATGCTCAGAGTGGGGTTATTTCTACAAGAATGGCCCTAGACAGAGAAGAAAAAACAGCTTATCAGTTGCAAATAGTAGCTACTGATGGTGGCAATTTACAATCTCCCAACCAGGCAATAGTAACCATCACTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGCTTTGTGGTTTTTGAGAACGTGGCGCTGGGATATCATGTGGGTAGTGTGTCTGCATCCACCATGGATCTCAATTCCAACATCAGTTATCTCATTACTACTGGGGATCAGAAAGGTATGTTTGCTATCAACCAGGTCACTGGGCAGCTTACCACAGCAAATGTGATTGATAGAGAAGAGCAATCCTTTTATCAGCTGAAGGTAGTGGCCAGTGGGGGCACAGTGACTGGAGACACTATGGTTAACATAACAGTTAAGGATTTGAATGACAACTCTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTGATGAAGGTGTCAATGGCATGGTACTCTATAGTCTGAAGCAAAACCCCAAGAACCTGTTTGCTATCAATGAAAAGAATGGCACTATTAGTCTGCTTGGGCCCCTGGATGTTCATGCTGGCTCCTACCAAATAGAGATCTTGGCATCTGACATGGGTGTCCCACAGCTCTCCTCTAGTGTCATCTTAACAGTTTATGTCCATGATGTAAATGACAATTCACCAGTGTTTGACCAACTCTCTTATGAAGTCACCCTTTCTGAGTCAGAACCTGTGAATTCTCGATTCTTTAAAGTACAAGCTTCTGATAAGGATTCAGGAGCAAATGGTGAAATTGCATACACCATTGCTGAAGGAAATACAGGGGATGCTTTTGGCATATTCCCAGATGGTCAATTGTATATAAAAAGTGAACTGGACCGTGAACTTCAAGACAGATATGTTTTAATGGTTGTTGCTTCTGACAGAGCAGTGGAACCCCTTAGTGCTACTGTGAATGTTACTGTAATTTTAGAAGATGTAAATGATAACAGACCTCTTTTTAACAGTACCAATTACACATTTTACTTCGAAGAAGAGCAGAGGGCTGGGTCGTTTGTGGGCAAAGTAAGTGCTGTAGATAAAGACTTTGGGCCAAATGGAGAAGTAAGGTATTCTTTTGAAATGGTGCAGCCAGATTTTGAGTTGCATGCCATCAGTGGGGAAATTACAAATACTCATCAGTTTGACAGGGAGTCTCTTATGAGGCGGAGAGGGACTGCTGTGTTTAGCTTTACAGTCATAGCAACAGATCAGGGGATCCCTCAGCCTCTCAAGGATCAGGCCACTGTACATGTTTACATGAAGGATATAAATGATAATGCTCCCAAATTTTTAAAAGACTTTTACCAAGCTACAATATCAGAATCAGCAGCCAATCTGACACAAGTGTTAAGAGTATCTGCCTCAGATGTTGATGAAGGTAATAATGGACTTATTCACTATTCTATAATAAAAGGAAATGAAGAAAGACAGTTTGCTATAGACAGTACCTCTGGTCAGGTAACACTAATTGGCAAATTAGACTATGAAGCAACACCTGCCTATTCCCTTGTAATTCAAGCAGTGGATTCAGGGACAATCCCCCTCAATTCAACGTGTACTTTAAATATTGATATTTTAGATGAAAATGACAATACCCCTTCTTTCCCTAAATCAACACTCTTTGTTGATGTTTTGGAAAACATGAGAATTGGTGAACTCGTGTCCTCTGTTACTGCAACTGATTCCGATTCAGGTGACAATGCTGATTTATATTACAGTATTACTGGGACTAACAACCACGGAACTTTTAGCATTAGCCCAAACACTGGGAGTATTTTTCTTGCCAAAAAACTGGACTTTGAAACACAGTCTTTGTATAAATTAAATATAACAGCAAAAGACCAAGGAAGACCTCCTCGTTCATCTACAATGTCAGTGGTTATTCACGTGAGGGACTTTAATGACAATCCTCCTAGCTTTCCTCCTGGAGATATTTTCAAGTCTATTGTTGAGAACATTCCCATCGGTACATCTGTCATTTCAGTGACTGCACATGACCCTGATGCAGACATTAATGGTCAACTATCCTACACAATCATTCAACAGATGCCAAGAGGCAACCACTTTACCATAGATGAAGTCAAAGGGACTATATATACTAATGCTGAAATAGATCGGGAATTTGCTAATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAGAACGTGACCATTTTGGTTACAGACCTCAATGACAATGTCCCAATGTTTATATCACAAAACGCCCTTGCTGCAGACCCATCAGCTGTGATTGGTTCCGTTCTGACAACAATTATGGCTGCTGACCCAGATGAAGGTGCTAATGGAGAAATAGAGTATGAGATCATCAATGGGGACACAGACACCTTCATTGTTGATCGTTATAGTGGAGACCTGAGAGTGGCTTCAGCGTTGGTGCCTTCACAGTTGATCTACAATCTCATAGTTTCAGCAACAGACCTTGGGCCTGAAAGGAGGAAATCGACCACTGAATTGACCATCATTCTTCAGGGCCTTGATGGACCTGTTTTTACTCAACCCAAATATATAACTATTTTGAAGGAAGGAGAACCCATTGGCACAAACGTGATATCAATAGAAGCAGCTAGCCCCAGAGGATCTGAGGCCCCAGTGGAGTATTATATTGTTTCAGTTCGTTGTGAAGAAAAAACTGTTGGACGCCTCTTTACTATTGGACGACATACTGGTATAATTCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGGTGGATGTTTATGCCATAGAAAAATCAACTGCTTTTCCCAGAACACAGAGAGCAGAGGTAATGATT---TTGTAGTCATTTATTATTTGTTGATTTGCTTTTTAGAAAAATCATTCTCTTTAT chr4 - 94230402 40053552 40053551 40058735 54171668 54171667 54176851 5184 CGGCTTC-CCTACCGGCTGAGCGAGCACCACGCCCTCTTCTCCATCTACGCCACCTCGGGCGCCCTGCACACCCGCGCCTCCATCGACCGCGAGAGCCTGGCCAGCGACGTGGTGGACCTGGTGGTGCTCTCCAGCCAGCCCACCTACCCCAGCGAGGTGCGCGTCCTGGTGCTCGACCTCAACGACAACGCGCCCGTCTTCCCCGACCCCTCCATCGTGGTGACTTTCAAGGAGGACACGGGCAGCGGGCGGCAGCTCATCCTGGACACTGCCACCGACGCTGACAGCGGCACCAACGGTGTGGACCACAGCTCCTATCGCATTGTGTCTGGCAACGAGGAGGGACGTTTCCGCCTCAACATCACCCTCAACCCTAGCGGCGAAGGTGCTTTCTTGCATCTGGTCTCGCAGGGCGGGCTGGATCGAGAGGCCACCCCCAGCTACCAGCTGCTGGTGCAGGTGGAGGACAAGGGTGAGCCCCGGCGACGCGGGTACCTACAGGTCAACGTCACCGTGCAGGACATCAATGACAACCCACCCGTCTTCAGTCAGACTCTTTATCAGGCACGTGTGCCCGAGGATGCACCCGTTGGGGCCAGTGTTCTGCAGGTGGCAGCAGCTGATGCTGATGAAGGCACCAACGCTGACATCCGCTACCGCCTGGAGGGAGGCGATGGTGGCGGTGGGGAGGGGGCCAGCAGCCTCCCGTTCGAAGTGGACCCTGAGAGTGGGGTGATCCGCATCCGGGAGCGCCTGGACTATGAGCTGTGCCAGCAGTACTCACTGACAGTGCAAGCCACAGACCGTGGGGTGCCTGCGCTGAGCGGCCGGGCCGAGGCCCTCATCCGCCTGCTGGATGTCAACGACAACGAGCCCCGGGTGAAGTTCCGCTACTTCCCAGCCACCTCCCGCTTTGCCTCTGTGGATGAGAATGCGGCACCTGGCACTGTGGTGGCCTTGCTGACAGTGAGCGATGCTGACTCCCCTGCTGCCAACGGGAACATCTCTGTGTCAATCTTGGCAGGCAACGAGCAGCGGCACTTCGAGGTGCACAGCAGTAAGGTACCCAACCTCAGTCTGATCAAGGTGGCGGCTGCACTGGACCGGGAGCGCATCCCTGCCTATAACCTTACAGTCGCAGTGGCTGATAACTATGGGGCCTCACCACCACCCCCAGGCTTCCCCACCTCTTCCCTTTCCCCTGATGGGGTGGCGGCAACTCCTGTAAGCCGCTCTTCAGTGGCTAGCCTGGTGATCTTTGTGAATGACATCAATGACCACCCGCCTGTCTTTGAACAGTCAGTGTACAGGGTGAACATCATTGAGGAGGTGCCTTTGGGCAGCTACGTGCGGGGCTTGACTGCTACAGACCGTGACTCAGGCCTCAATGCCAACCTCAAATACAGCATTGTGTCTGGCAATGAGCTGGGCTGGTTCCACATCAGCGAGCACAGCGGGCTGGTCACCACAGCTGGTCCTGGGAGTGGCACTGCTGGGCATGCTGGGGGTGCGTCTGTCACCAGTGGGCTGGACCGGGAGACCACGTCCCAGGTGGTGCTCCTTTTCATTGCACGTGACCAGGGGGTGCAGCCCAAATTTTCCTACGCGCAGTTGGTGGTGACCATCCTGGACATCAATGACAACAAGCCTCGTTTCAGCCAACCTGAGGGCTACCAGGTTTCCTTGGCTGAAAACTCCCCATCAGGAACTGAGCTGCTGGTCCTGAGTGCTGTGGATGGCGATCTGGGGGACAATGGGACCATTCGTTTCTCCCTTCAGGAGGCTGAGCCAGCAGTGGTGGCAGTTGGTCCCTCTTCAGTGACTCCTCGGCAAGTCTTTCGCTTGGATCCCGTGTCAGGCAAACTCAGCACCATCTCACAGCTGGACAGGGAGGAGCAGGCTCACTTTTCCCTGCAGGTCCTGGCTACAGATTTGGGTTCTCCTCCCCTTTCTTCAGTAGCCCGGGTTAACGTGAGTCTTTTGGATGTGAATGACAATAGCCCTGTTTTCTATCCTGTCCAGTATTTTGCCCATATCCAAGAGAATGAGCCAGCCGGAACCTATGTAACCACTGTGTCTGCCACTGACCCTGATATGGGGCCCAATGGGACCGTCAAGTACAGCATCTCAGCTGGGGATACCTCTAGGTTCCAGGTCCATGGCAAGACCGGGATCATTACCACAAAAATAGCCCTTGACAGGGAGGAGAAAACTGCTTACCAGTTGCAGATTGTGGCCACTGATGGTGGCCATCTTCAGTCTCAGAACCAAGCCATTGTCACCATCACTGTCTTGGACACTCAGGACAACCCACCTGTTTTCAGCCAGGGCATGTATGGTTTTGTTGTTTTTGAAAATGTTGCTCTAGGTTACCATGTAGGTACTGTTTTCGCTTCTACCATGGATCTCAATACCAACATCAGTTACCTTATTACAACAGGTGACCAAAGGGGTATGTTTGCCATCAACAAAGTGACAGGGCAGATCACCACGGCCAGTATTATTGATAGGGAAGAGCAAGCATTTTACCAGCTGAAAGTGGTGGCTAGTGGTGGGGCAGTGACTGGAGACACTATAGTCAATATAACTGTCAAAGATTTAAACGACAATTCGCCACACTTTATTCATGCCGTGGAAAGCGTAAATGTGGTTGAAAACTGGAAAGCTGGTCATACCATATTCCAAGCCAAAGCTCTTGATCCTGATGAAGGTGTTAATGGCATGGTCCTTTACAGCCTTAAGCAAAACCCAAAGGGCTTGTTTTCAATCAATGAACAAACAGGTGCTATAAGCTTAATAGGGCAGCTGGACATAAATGCTGGGACTTACCAGGTTGAAATCCTGGCCTCAGATATGGGTGTGCCACAGCTGTCCTCTACTTTCGTCCTGACTGTCTCTGTCCATGATGTAAATGATAACCCTCCTGTGTTTGACCAGCTTTCCTATGAAATTACAATTTTGGAGTCTGAGCCAGTGAATTCACGGTTCTTTAAGGTACATGCTACTGACAAAGATTCAGGAGTGAATGGTGAAATAGCTTACAGTATAATTGAAGGAAATGCTGGGGATGCCTTTGGCATTTTCCCAGATGGTCAGCTGTACATAAAGAGTGAACTGGACCGTGAGCTTCAAGAAAGATACATTTTACTTGTTGTTGCCTCTGATAGAGCAGTAGAACCGCTCAATGCTACTGTGAACATTACAGTAATTCTGGAAGATGTAAATGATAACAGGCCATTGTTCAACAGTACCAACTATGTATTTTATTTTGAAGAGGAACAGAGTGGTGGTTCCTATGTGGGTAAAATAAATGCTGTAGACAAAGACTTTGGGCCGAATGGTGAAGTCAGGTATTCATTTGAGCACATGCAACCAGATTTTGAGCTGAACACAATAACTGGCGAGATAAGAAGTACTCATCAGTTTGACAGGGAAGCTCTTATGAGACAGCGAGGAGCTGCAGTATTTAGTCTTACAGTTATAGCAACAGATCAGGGGTTGCCAAAGCCTCTAAAGGACCAGGCAACTGTACAGATCTACATGAAAGACATCAATGATAATGCTCCTAAGTTTTTGAAAGATCTCTACCAAGCTACCATATCAGAATTGGCAGCAAATTTGACACAGGTTCTGAGAGTTTCTGCTTCAGATGTTGATGAAGGGACTAATGGGTTGATTCACTATTCTGTGATCAAGGGAAATGAAGAAAAGCAGTTTGCAATAGATAGTAGCACAGGCCAAGTGACTTTAGTAGGCAAACTAGATCATGAAGCTACTGCATCATATTCACTTGTTATCCAAGCGGTAGACTCCGGAGCAGTTTCCTTAAGTTCAACTTGCACCTTGAGCATTGATGTATTGGATGAGAATGACAACAGTCCTTCCTTCCCTAAATCAACCTTGTCAGTGGATGTCTTGGAAAACATGAGAGTTGGTGAACTTGTTTCCTCTGTCACTGCCACTGACTCTGATTCAGGTGACAATGCTGACCTCCATTATAGCATTACAGGGACAAACAACCATGGGACCTTTAGCATCAGTCCCAACACTGGTAGTATTTTTCTTGCAAAGAAGTTGGACTTTGAGACACAATCTTTGTATAAGCTAAATATAACAGCAAAAGACCAAGGAAGGCCACCAAGGTCATCTACGATGTCAGTGGTAATATATGTTCGGGATTTTAATGACAACCCTCCTAATTTTCCTGCAGGGGACATTTTTAAATCTATTATTGAGAACATTCCTGTTGGTAGTTCTGTCATTTCTGTGACTGCTAATGATTCAGATGCAGATATTAATGGGCAGTTAACATACGCAATCATTCAACAGACGCCACGAGGTAATCATTTCCGTATAGACGAAGTCAGAGGGACAATATTTACCAATGCTGAAATAGATCGGGAGTTTGCTAATCTCTTTGAATTAACAGTCAAAGCCACTGATCAGGCTGTTCCTGTGGAGTCCAGACGGTTTGCTTTGAAGAATGTGACTATTTTAGTGATGGATCAAAATGACAATGTTCCTGTGTTCATATCGCAAAATGCTCTTGCAGCTGACCCTTCAGTCATGATTGGTTCAATCCTAACAACAATTATTGCAGCAGATCCTGATGAGGGAGCTAATGGAGAGGTGGAATATGAAATAATCAATGGAGATACCAAAACATTCATTGTGGATCGCTACAGTGGAGACCTAAGAGTAGCATCAGCTTTGGTGCCTTCTCAGCTAATATACAATCTGATAGTTTCTGCTACAGATCTTGGCCCTGAAAGAAGGAAATCTACCACTGAGATGACTATAATTCTACAAGGCGTTGATGGGCCTATATTCACGCAGCCAAAATATATAACTATCTTAAAAGAAGGTGAGCCTATTGGGACGAATGTGATATCTATTGAAGCAAGCAGTCCACGGGGTTCTGAGGCCCAGGTGGAATATTACATTGTGTCCGTCCGATGCGAAGATAAGAGTCTGGGGCGCCTCTTCACCATTGGGCGCCATACTGGTGTCATCCAGACTGCTGCCATTTTGGACAGGGAGCAAGGAGTGCGTCTCTACTTGGTGGATGTTTATGCCATTGAAAAATCTTCTGTTTTGCCCCGCACACAACGAGCAGAGGTAAAGCTTTTCTTTTATTCAGTAATTATTCATGTGTTTGCTTTCTAAACAAGCTGTTTCATGTAT 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........:.x..:.....:..x......:.....x............:::....:...:...................x........xx...:...x...x.x.....:x............x.x..---..x..x...x.x......::.xx:........:..:.x..::::..::x.x... 7M1D663M18I8M9I455M9I10M33I15M3I241M2I6M22I8M18I263M8I16M25I3288M3I54M 3891/5034 77.3% 5184/94230402 0.0% 151/5034 3.0% 85263063 NA +3769 chr4 + 190214555 125318415 125318414 125318665 251 CCAGTCATCAATGGCTCGCATAAATGTGAGTCTTCTG---GATATAAATGATAACAGCCCTGTCTTCTACCCGGTCCAATACTTTGCTCACATTAAGGAGAATGAGCCTGGAGGTAGCTACATCACCACTGTGTCTGCCACTGACCCAGACTTGGGTACCAATGGTACTGTCAAATATAGCATATCTGCTGG----GGACAGGTCTCGGTTTCAGGTCAATGCTCAGAGTGGGGTTATTTCTACAAGAATGGCCCTAG chr4 - 94230402 40054781 40054780 40055032 54175371 54175370 54175622 252 CCGCTCTTCAGTGGCTAGCCTG---GTGATCTTTGTGAATGACATCAATGACCACCCGCCTGTCTTTGAACAGTCAGTGTACAGGGTGAACATCATTGAGGAGGTGCCTTTGGGCAGCTACGTGCGGGGCTTGACTGCTACAGACCGTGACTCAGGCCTCAATGCCAACCTCAAATACAGCATTGTGTCTGGCAATGAGCTGGGCT-GGTTCCACATCAGCGAGCACAGCGGGCTGGTCACCACA--GCTGGTCCTGG ..:x..x...:.....x..x.:---....x::..x..---..:..x.....:x..xxx........:x.x.x.x:xxx:...xxx.:xx....:.xx...:.x.x....xx:..:......:.xxxx:x:x..x....:..x....xx....::..:x:.....x:.x:x.......:.....xx:xx....----.::.x..x..-....:..x:...::.xx..x..:...x.x:.:x.:...--:x...:...:. 22M3D12M3I152M4I10M1D38M2D11M 148/245 60.4% 252/94230402 0.0% 13/245 5.3% 85263634 NA +3325 chr4 + 190214555 125319002 125319001 125319210 209 TGAAGGTAGTGGCCAGTGGGGG--CACAGTGACTGGAGACACTAT-GGTTAACATAACAGTTAAGGATTTGAATGACAACTCTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTGATGAAGGTGTCAATGGCATGGTACTCTATAGTCTGAAG chr4 - 94230402 40054006 40054005 40054217 54176186 54176185 54176397 212 TGCAGGTGGAGGACAAGGGTGAGCCCCGGCGACGCGGGTACCTACAGGTCAACGTCACCGTGCAGGACATCAATGACAACCCACCCGTCTTCAGTCAGACTCTTTATCAGGCACGTGTGCCCGAGGATGCACCCGTTGGGGCCAGTGTTCTGCAGGTGGCAGCAGCTGATGCTGATGAAGGCACCAACGCTGACATCCGCTACCGCCTGGAG ..x....:.x..x..:x..x.:--.x.:.:...xx.:.xxx...:-...:...:.x..x..xx....:x.x.........:.x...xx:...xx....:.xx.xx.xx:x.:.x:....x:x...:..xx:.xx.:x..xxx...::..:.x....:x:x...x.:x..:x..........:::...:.x::xx:.x.x...:x.:...:.. 22M2I21M1I166M 120/209 57.4% 212/94230402 0.0% 3/209 1.4% 85264996 NA +6535 chr4 + 190214555 125323552 125323551 125323785 234 AAGTGCTGAAATTGTAAACCCAATTTGAGTTCTCAAGATCCAACCACTTTGAAAATGAAAAGCAAATGTGTT--TCTCCAAAGAATATTGAAAGCAGTGGTTGTGAGCTAGAATTTCATATTATTATTGGTTGGATTTTTCAAGTGTATACAATAAAGTGCTGTTTTCCTTCTGCTCAAACA--ATTAATTTACTGTGATTCTGCAAAAATAAGTTATACATTTCCTCTTGTTATCAA chr4 - 94230402 40060438 40060437 40060661 54169742 54169741 54169965 224 AACTATTGAAACTTTAAACAAATTTTACATTGTTGAATACAAACCACTGCTGAAATCAGAAACAAATGTTTTATTCTGTAAAGAATATTGAGAGCAATGGTTTGGAGCTTGAATTTCATGTTATTA---GTTACATCTTTATAGCTTCTTAAATG----------CTTCTTCT-CCCAAACATGATTAGCTTACAGTGCTTCATTAGaaatatattataaattataatCAGCTATCAA ..x.::.....:.x.....xx.x...:x:..x.::.:xx.x.......x:x:....x.:..:.......x..--...x:............:....:.....xx.....x.........:......---...:x..:...xx..:x.x.xx...:----------:.:.....-.:......--....::....x...x...xx:.:.....x:.....x...x:xx::x.:...... 72M2I52M3D26M10D8M1D8M2I54M 153/220 69.5% 224/94230402 0.0% 18/220 8.2% 85263114 NA +8643 chr4 + 190214555 125334974 125334973 125335232 259 TGAGGTTGTAATTAGTTA----CAAGTAATGAATCTTTAGTGTTCTAATTCCAGAGCCTGGCAGATTTAGAACACCAGTTGACCC-TGTCTTGCTGGAAAATGAAGGAAGTGGGAGTAGA-ATTTTCTCTGTAGGACAAGACAGCTTTGGATGGGAGGGACA---ATAGAAGCTTGCCAAAA-ACATGGGTCAAACT----GAACACAGATGGCTGTAGCTGATAGAGGTGTCTATTATTGTGTTTTCTTCTCA--GCAGTTTTCTCTTTGTTTG chr4 - 94230402 40067882 40067881 40068156 54162247 54162246 54162521 275 TGAGCTTGTAATTAATTAAACACAAGCAACAATGCCTTATTATTTTAAGCCATGCAGTTGACAGATTCAGACGTCTGCTCGAGCTGTGCACTGGTGGAGAGAGGAGGAAGTGGGAGTGAACGTTTTCTCTGCAGGGCAGGATGATATTGGGTAGTAGAAAGCTGCGCACATGCCTGCCAAAATACTTGGATCAGACTAAGGGAACACAGATGGCTGAGGCTGATAAAGGTGTCTCTTATTGTTTTTGCTGCTCAGTGCTGTTTTGAGTTTGTGTG ....x.........:...----....:..::.xx.:...x.:..:...x:.xx.x:x:..:......:...xxx.::x.:..x.:-..:x:..x....:.:x.:.............::.-:.........:...:..:..::::x....:.:.x..::.xx---::.x.x..:........-..x...:...:...----...............x:.......:........x.......x...x..x....--..x.....xxx.....x.. 18M4I63M1I34M1I41M3I17M1I14M4I53M2I19M 183/259 70.7% 275/94230402 0.0% 16/259 6.2% 85267092 NA +37723 chr4 + 190214555 125345859 125345858 125347004 1146 GGTATTAGTGTCACAGTTCAGTTGAGCTGTTGTTATCTGTATGAGATCAATCTTTTGGAGAAGGCAGTGAAGGTTTTCTT-ATTTAATTTGCTTTCAGCAAGTCCTCCCCCTCTTTTTTTTTATATATAATTTTAAGTACTGCTCTTAGTGGGTCATTAGACTTT-GAGAATTATTCACTTTGTTAGCCCAAACACTAAAACCTTGTGTCTTTTAACTCTGATTAGTGACACTTTAATAAAGTCATTTGAAGTTCAGTGGACTGAATTTTCCAACTTTTCTGATGTTTCTATGGTCACGGTAGAGCAACCTGTATTGAAGCTTGTACACAAACTTTTAAATGCAAATCTTGGA-AAGCTG-TGTGTAATTTTGTATATCTGACTTCAACAGGGACTGCAAAATGTGAGGGATTAAAAATAAAAGCGGTAGCAGTG--------------------TTTTCCTTCTTTTTGTTTTTCAAGTTGGGGTACAGTAAGCTTTGGGAAATAGAGAAGTTGTCACTTGACTAAACTTGATTCTCTGAG---AAAAAAAAACTTGCAGA-----TTAAAACTTTTATGGCTATACTTTTTTTTTGACAAACCAATGAGCACAAAACCTCATTTTCTTCCACATGATTAGACAATAAGGGTAATGCAAACTATTGAATCATAAATTTCTTAGAGATAGAGCCTTGAATTTTTTTTT--------------GAAA--------------------AAGTAAAGAAAAAG-TATATTCAAT-GGCTATAATTAAATCATGCACGGTGAACCCACTTTGGAGGAATTACTTCATTTTGTATTGCATTGCGACTTGAGTGAACATTTACAACACGTGAGAATGGAAAGGATGAAAAATTATGGTTGTCT-TTCGGTTCACAAGAATTCAAGGAGGCAGGTCATTGAGTTAATTTTCATGGGAAGACTAACTCTGGCCTGCTCGCATATTCAGAGGCCAAACAACCTGGTATTGACAGCCTCAATTT-GGGAGGGGAACATGCAGCAGCATTGTGCCATGGTTTGTTGAGGAAAAACAAGGGAAGATTTAAAACAAAGCTGTGAATAGGAACAGTAGCCCTTGTGTCTTGAAGCTGATTGACTTTTCCTTTTTAGACCTTTGTGA------AAGTGTTACCCTCTCCTTTAAATAAGGGCTATACTGTGGTAAGAGAAATATTTAAGATATAATT chr4 - 94230402 40077138 40077137 40078253 54152150 54152149 54153265 1116 GATTTCAGAACCATAGTTCAGT---GATCTTGTGAGGTGCCTGAGAGCACTCATTTCTTAGAGGCAATTGAGGTTTTTTTTATTTAGCTTGATACTGACAAGG-----------TTTTTTTTAAA----------AGTAATGCTCTTAG-ATGTCATTTGACTTTTGAGGGTTGTTCACTTTGTTGGCCCAAACACTAAAACCTTGTGTTCTTGGGTTCTGATTACTGATGCTTTGATAAAGTCATTTGAAGTTCTGCAGACTGAATTTTCCACCTTTTCTAATGTTTCTATGGTCACAGGGAAGCGACCTGTATT------------CAATCTTTTAAATGCAAATCTTTGAGAAGTTACTGTGCAATTTTGTGTACCAGACTTCTTCATTGGTTACAAAAAGTGCCTTTTTTA----AACAGCTACAGCAGTGtcttttctccttcttttctattttcctcctctctttctttctctttATGTGACAGCAA--------------------------TTGACTAAACTTGGGTCTTTTAGGGTAACAAAAGACTGAGAAAAATCTTAAAGGTTTTTATTGCTCTAC--TTTTTTGGCTGGGCCAGAACAGACAAAGGC------CTTTCCACTTGATTAGATAATAAGGCTAACGTAGGCT-TTGAGTGAAAAATATCTT-----TACATTCTCTTCTTCTTTCTCCTCCAACCCCCAAAGAAAGAAAGGGAGGGGGGAGATGGAAATAAAAAGAAAGCCATGCTTAATCAGCCACAATTAAATCTTTCATGGCAAACTCACTTTGGAGGAATAAACGCATTTTGTATTGCCTAACAACTTGAGTGAACATTTACAACACGTGAGAACTGGGTGGAAGAAAAATTATGGTCATCTCTTTGGTTCACAAGAACCACGGAAGGCAGGTCATTGACTTGATTTTCATGGGAAGATTGACTCTGGAGTGCTCGCAGATTCAGGAGCAGAACGAGCTGGTATTGACAACTGTGACTCGGGGAGGGGAGCGT------TGATTGTGCCATGGCTTGGTGGGGAAAAACAAGGGAAGACCTAAAACAAAGTGCTGAAGGGGAACAGTGGTTGCAGTGTCCTGGGGCTGGCGGGCAGCTTCT-------CATTGGTGATGGGTTAAGTGTTGCTTCTTGACTTGAGAAGA--------TGGGGT-AGAGAAATATT---AGTATAATT .:.x.:..x::..:........---.x.x....x.xx..:x.....x..x..x...xxx::.....:.x:.......:..-.....::...x.x::::....x-----------.........x.----------....x.........-:x......x......-...::..:...........:.......................::..x:::........x...::....:...................x.::..............x.......:................:.x::...:.........------------...x..................x..-...:.:-....:........:..:.x......xx..xx.::.:.....x...xxxxx..x.----..x...x::.......--------------------.......:..:.:.x.:....xxx..:x.xx....:..--------------------------.............:x...:.x..---..x....:...x:x.:.-----.x..:::......x...x...--......x.x::::...:x:x:x.....:x.------::......x........:.......x...:.:.::..-....:.x.x....x....-----..x.x:..:xxx..:...:.:--------------....--------------------..:....:.:....-:..::.:...-:..:.:.........x.x..:..::...:..............x.x:x.............x.x:.:..............................:x.::x...x.............::...-..:............::xx:.:..............x..:...............:.:.......xx........x......::..x:...:.x............:.:x::.:.:-.........:.:.------xx............:...x..:.................::..........:xx....x:........:.::x:x.....:..::....::x.:.xx:.:..-------.x..x....------.......:.::::.xx:..:.:x.::--------..x...-...........---::....... 22M3D55M1I22M11D11M10D14M1D15M1I150M12D25M1I6M1I54M4D16M20I38M26D23M3I17M5I21M2D30M6D37M1D18M5D21M14I4M20I14M1I10M1I125M1I116M1I13M6D102M7D9M6I26M8D6M1D11M3D9M 776/1040 74.6% 1116/94230402 0.0% 182/1040 17.5% 85268721 NA +12041 chr4 + 190214555 125357515 125357514 125358066 552 ATTAGCATTAAGTAAATGAGATACATTTGCCATTTCAGCTGTATTTGTTAACATTAGATTTTCAT--ACAAATACAAGAGATGTTATTTTAACTGCTCATTCTTATG-GATTTTACTGCTTTCACTAAAGAGAAACAAAATATTT---------------TATCTCCTCA---TTGCAATTTAGGCTT-AGGGAGTAACAACTAAGCATATACATTGTTGAACACTGCTGGCATGTGCTTTGTGAATATGTTTGAATCAAGGGCCTTTACAAAGGGCTCAGACCTTCCTCCTAGGGGG-TTGTCATTTACCGTGGATGCTCTCGTTTGTTGTG-GTAAACAGCCTCAGAAAACGTCTTGACATTGTCAATTCCAACAGATTAATGAAGTAACTGGGCCAT--ACATCCCTTCCCCTTTACATATGAAAGGAAAAGCTAACTACTTCATAGAGCTGTAAGATTGTTTCCTTTTACCCCTTGGTATTAGTTTCCTTTGTAGTCAGTTAAGTATGGTTCTTTTAAGTAAGCCAGACCAGAATTCTTTTAAGTAAGCCAGCTTGGGC-GGGGGAACTCCAGTG chr4 - 94230402 40087945 40087944 40088510 54141893 54141892 54142458 566 ATTCATATTTACCTAATGAGAAATACCAGCCTGTCTGAGTTTATGTGGTGTCCTGGGGGTTTTATGCACAGGTATGTAGAATATTATTTTA-TAGGTCCTTCTCATGAGTTTTTACAGCTCTCACTAATGAGAAACTACAtctctctctctcgctctctctctctctcCAGCTTTCCAGCTGGGGTTTGAATGTGTGATAAATAAG-ATATAAACGGTAGAAAACTGAGAGCTTATGCCCTGTGGATATGTTTGCATCTTGGGTTTCGACA---GGCGTATACCTTCCTCCTGGGGGGGTTGTCACTTACTACCAAGTTTGTTGTTGAATGGGTGTGAATAGGCACTGGGGACCTTTAGATGCTGTTAAATCACTCATGTTAATGAAGTGCTGGAGCTAGGGACATCCCT--CCCTGCAGTAATCAAAGAAACAGTGAGTCCCCTCACATATCTATAAGATTATTTCCTTTCATCTGCCAGTATTAGTTTCTTTTGAAGTCATTTAATCTTTGCTC---TACATAAACCA-AGGAAAGCCATTTTAAGCAGCTCAG--TGGGCAGAGGGGAATCCTGTG ...x::...x.x:x.......x.:.::x...xx.::::x.x...x..x.:x.x.x:.:x...:..--...::..::x:::..:........-:x.x..x....:...-.x......x...:.......x.......x.x..x.:.---------------.x....::..---..x..::.x:..:..-.:x.x..:.:..x....-.....x.:x..x...x....xx:..x.:...::....:.........x...xx...::.:x...---...x:.x...........:.....-......:....:::x:.xx:.x.:...x:x..x.-..:..:..x.x.x.:::..x.:.x..:::...:..x..xxx..x:..........:x:x.:..:.x--........--....x:.xxx..x....:..x..:x.:::x.:...:.x.x..:.......:........:.:.:x:::...........:....x.....x....x:x.x.:..---..x:...:...-.xx.:.:::x.......:.:x:...--.....-.:...:.x...x... 65M2I24M1D15M1I37M15I10M3I15M1I17M1D64M3D24M1I34M1I66M2I8M2D104M3D11M1D25M2D5M1I15M 352/539 65.3% 566/94230402 0.0% 40/539 7.4% 85269570 NA +13003 chr4 + 190214555 125389830 125389829 125390136 307 AGGCCTTGCATACCTACATAGTCCAAACATTACATTCCTGACATTTAGAACATTTAAATGCAAACTGTTCTTTGTTAGGGCTTTCTCATAACTGAAATATGAGTCACTTGCAAACCATAATAGATTTTGGCTCTGCTACATGATGAAGTGTTCTGGATGTCGTGAAACATTTCACCCAGACTTATGGCAGTAGAATTCCCAGTGGTCACCCAAAATAGGGAAAAAAATGAAGAACAAACTTAAAGGAAATATGCAGACTCTGGCACCATCCTTTCGTGGCAATACAGCTCTTTATTGTTGTTAAGAA chr4 - 94230402 40119138 40119137 40119425 54110978 54110977 54111265 288 AGACCTTGCATACCTACTTAGAATCAAGATTAAATTACCAACCTTTTTGGCATTTTTATGTAAAATGTTCTTTATTCTGGTCTTCTCATAGCTGAAGTATGAGTCACTTGCAAGCCATGCTAGATTTTGGCTATGCTGCTTGATGAAGTGTTCTGGATGCAGTGAAACATTTAATCAAGGCTCCAGGCAGAGCAATTCCCAGTGGTCACCTTAAA-----AAAAGGATAGAGAA-------AAAAGAAA----CAAATTATGGCACGTTTTGTTTGCAGCATTAGG---CTTAGTGTTTGTTAGGAA ..:..............x...xx:x..x....x...x.::..x...xx::.....xx...:...x........:..xx..::........:.....:................:....:x............x....:.x...................:x...........x.:.x..:..:xx.....x:x.................:x...-----....::..::....-------...:....----..:.:.x......xx.::x..:.::...x..x:---...x:.xx......:... 215M5D14M7D8M4D33M3D18M 217/288 75.3% 288/94230402 0.0% 19/288 6.6% 85270692 NA +3007 chr4 + 190214555 125396906 125396905 125396946 41 ATGTATGTGTATGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ....:.....x.x.......................:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 35575625 NA +22637 chr4 + 190214555 125398324 125398323 125398919 596 TTCTTAAAACAACATGT--GAACTTTTTTATTTCCCCCAGACATTAG--TTGCCAATATGTAAACATTTCAGCAAGAAATTTTATACCACCTCCTCTGTTTGTCAGGCAGCATTTAATGGTTGAATGACAGACAGTGCTGAGCCTTGGCAG---TTCCATAGTGATGTGCAAATCTGGGGATTAAAATGACAGTTAATCAGTGGACCTTTTCTAGTATAAACT---CCATGGCCACTATTTAAAATCAGTTACTTATCAACAAGGCAGACGATTTTTATTTCGACTTTATGTTTTCGTGTAAAGATTTCACAAC----------TTT----TCCCTAGGGGTAGTTTCTGTTGTTTGGATGTTAGATGCAAAGGTTCCAATTCAT----TTTGGCA-------------GTCTT----GATTGCGTGGATTCCTGGTAGTCA-TTTTAATTGGTATCTTGCAGACACGTGGGAGTCATTCACACATTGTTTCCT-----TTTTCTTTGTAGGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAACATTGGAGATGGCTCTAAGATTATGCAGCTGACAGCCATGGATGCTGATGAGGTAG chr4 - 94230402 40128195 40128194 40128822 54101581 54101580 54102208 628 tttttaatataaaatGTAAGGGTGTTTTTTCCTCCCTCAAAACTGAGAGTTGCCAATACATAAACATTTCAGAGAGGA-TTTTACACCACCTCATCTTTATGTCAAGCAGCATTTAATGGTTGAATGATCCCCTGCCCCGGGACTTGGCAGCTATTCTCCAGGGGC---TGACTTTGGAGATTACAATGACAGTCTATCAGTGGATCTTTTCCAATATAAACTAGGCTAGGGCCA---TTTAAAATCAGTTGCT-ATCAACAAGTTAAATTATCTTTATTTATGTTAGAAGCTTTCCTATAAGTATTTTATAACAGTGTGGAATTTTAATATCCGGAGGGGTTGTTCCTGTTGTC--ACTGTTATTTGGCAATGTTCTAATTCATGCGATTAGGCACAATTTACCTGATTTCTTTCAAAATTATGTG-ATTTGTAACATTCAAGTCTAATCAACATCT----AACTCGCAG----TGCTCACACAACTTTTTCTGATTCCTCTCCTTATAGGTGGAAATAACACTTCAAGATATCAATGACAACCCACCAGTATTCCCCACAGATATGCTTGATCTGACTGTGGAAGAGAATATAGGAGATGGATCTAAGATAATGCAGCTGACAGCCATGGATGCTGATGAGGTAG ..:....x.:..x....--.:::x.....x::....:..:.xx.x..--.........::............x:..:.-.....:........x...x.x.....:......................:xxx.x.:x.:.:.x........---...:x:..x.::---::.x.:...:.....x.........:x.........:......:.:........---.:.x.....---.............:..-.........x:.:.:x..:.......xx::.xx.x.:....x.:...:x....:.:...----------...----...xx......x...:.......:--:x.....xx..xx..x....:.......----..x....-------------x....----:...::...-...:x.:::.x...-x.:....::::....----:..x..::.----:::.......x:x...:..-----:.:..:..:.....:..............:..............:...........:..x..:..:.....x.....x..x..:..:.....:..x........x........x.................................. 17M2I28M2I29M1D72M3I12M3D54M3I9M3D16M1D59M10I3M4I24M2D28M4I7M13I5M4I9M1D14M1I15M4D9M4D19M5I148M 440/577 76.3% 628/94230402 0.0% 70/577 12.1% 85270129 NA +16566 chr4 + 190214555 125406869 125406868 125407144 276 TCTTTTTTTAGGGTGCAAATGCTCTCGTCACATACACTATCATTAGTGGAGCTGATGATAGTTTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATATTCACTGCTAGTTCGTGCTGATGATGGTCTTCAGTCCTCGGATATGAGAATTAATATCACTGTCAGTGATGTGAATGACCATACACCCAAATTTTCCAGACCCGTGTACTCTTTTGACATTCCTGAGGACACAATCCCTGGTA chr4 - 94230402 40133081 40133080 40133356 54097047 54097046 54097322 276 TTTTTACTTAGGGAGCCAATGCCCTTGTCACATACACTATTATCAGCGGTGCGGATGACAGCTTCCATGTTGACCCCGAGTCAGGAGACCTGATAGCCACCAAGCGCCTGGACCGCGAGCGCCGCTCCAAGTACTCCCTCTTGGTTCGTGCTGATGATGGCCTGCAGTCCTCTGACATGAGGATAAACATTACTGTCAGTGATGTTAATGACCATATCCCCAAGTTCTCCAAGCCAGTGTATTCCTTTGACATTCCAGAAGATGCCACTCCAGGTA .:...x:......x..x.....:..:..............:..:..:..x..x.....:..:..:.:::.:.....x..:..x.....:........x....:...x:.....x.x..:...........:..:..x..x:.:.................:..x........x..:.....:..x..:..:..............x..........:x.....:..:....::..x.....:..:...........x..:..::.x.::..x.... 276M 214/276 77.5% 276/94230402 0.0% 0/276 0.0% 85273788 NA +21922 chr4 + 190214555 125408424 125408423 125408804 381 TTAATTTATTCTTTT---------GATAGGTTCTTTGGTAGCAGCCATTTTAGCCACGGATGATGACTCTGGTGTGAATGGAGAAATTACATATATTGTGAATGAAGATGATGAAGATGGCATCTTTTTCCTGAATCCTATTACTGGGGTCTTTAATTTGACTCGATTATTAGATTATGAAGTACAGCAATATTATATCCTCACTGTTCGAGCAGAAGATGGTGGGGGACAATTTACTACCATCAGAGTTTATTTCAATATTCTAGATGTAAATGATAATCCACCTATTTTCAGCTTGAATTCATACAGCACATCTTTAATGGAGAATCTACCTGTGGGATCTACTGTTCTTGTGTTTAATGTTACTGATGCAGATGATGGTATGTATTT chr4 - 94230402 40134993 40134992 40135382 54095021 54095020 54095410 390 TTACTTTACTCTCTTCTCATGCTGTGCAGGCTCATTAGTGGCAGCCATTCTAGCTACTGATGATGACTCCGGTATAAATGGAGAAATCACATACACTGTGAGTGAAGATGATGAAGAGGGCATGTTCTTCCTGAACCCTGTTACAGGAGTCTTCAACTTGACCCGCGCGCTAGACTACGAAGCACAGCAGTATTACATTCTGACCATCCGTGCGGAAGATGGAGGAGGCCAATTTGCTACCATCAGAGTGTACTTCAATATACTGGACATAAACGACAATCCACCAGTGTTCAGTATGACCTCATATAGTACATCTTTGATGGAGAACTTGGCTCCAGGATCTGCTATTCTCAACTTCAGTGTCACTGATGCAGATGACGGTAGGCCTTT ...x....:...:..---------x::...:..x..:..:.........:....:..x...........:...:.:...........:.....:.:.....:...............x.....x..:........:...:....x..:.....:..:.....:..xx:::....:..:....:......:.....:..:..x..::.:..x..:........x..:..x......:.............x..:........x..:..::....:..:........x:.x.....:x...x:.....:..:........:........::.:x..x::......:..:....::xx..:.:...:..............:....x.:x... 15M9I366M 292/381 76.6% 390/94230402 0.0% 9/381 2.4% 85273431 NA +51170 chr4 + 190214555 125414881 125414880 125416637 1757 CAGGCATCAACTCTCAATTGACTTATAGCATTGCTTCAGGTGATAGCCTTGGGCAGTTTACTGTTGACAAGAATGGTGTACTCAAAGTCCTAAAAGCTTTGGATCGGGAAAGTCAGTCCTTCTACAACTTGGTTGTTCAAGTGCATGACCTGCCACAGATTCCAGCCTCCAGATTCACAAGCACTGCTCAAGTCTCCATTATTTTGTTGGATGTAAATGATAACCCACCGACATTTCTTTCCCCTAAATTGACATACATTCCAGAAAATACACCTATTGATACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACTCTGCTGAACCCTTTGGGAAACAAGTTCAGTATTGGGACCATTGATGGTGAAGTGAGGCTCACTGGAGAACTGGACAGAGAAGAAGTTTCTAATTATACTCTAACAGTGGTGGCTACAGACAAAGGTCAACCATCTCTCTCTTCATCTACAGAGGTTGTAGTTATGGTACTTGACATCAATGATAACAACCCCATCTTTGCACAAGCTTTGTATAAAGTGGAGATTAATGAAAACACACTTACTGGAACAGATATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGCACAAATGGACAGGTTCGCTATGGCATTGTTAATGGTAATACCAATCAGGAATTTCGGATAGACTCTGTCACAGGTGCCATCACTGTCGCTAAACCTTTGGATAGAGAAAAGACCCCTACCTACCATTTAACTGTTCAGGCAACAGATCGAGGCAGCACACCCAGAACTGATACCTCCACGGTCAGCATTGTTCTACTGGATATTAATGACTTTGTTCCTGTATTTGAGCTATCTCCATATTCTGTAAATGTCCCTGAGAATTTAGGGACACTACCCAGAACAATTCTTCAGGTCAGTATATTTAAATAA--AGCAAGTA-TTGTCTTAATTATAAGACATCTATTTGAAAACCTCCCCTCTTCTACAGCGTTTACGCTTCCCCTGTTCTCTCCTCATTCTCATCCATAAATGCTCAATTGCAGATACAGCAAATTTTGAAAAGGAAAGGTTTATAAACATCATACCTAAGA---ACCTCTTAATTTCCTCATTGATGAAACTTTTGTATTTTACTAGCTTTC-TTTTGTGTATACTCATGTTGC------ACACATTTATGTATTTGTGTTT---TTGAATTTTG----TTCCACAAGGATAATATCTGCACATAGTAAAAAACTAAAATGATGGAAATGTTTG-----------AAACTTCGTTATAAAT--ATTGTTCTACTCTTTTCCTTCATATATTTAACTACCTAGG-TGAAACTGCTCTTAAAAATTTTTATGAAGCCTT----------------CCAAAAATGCTGTGCATTAGCTTTACACATATT--------TTTACACAAATAGACTCGGGTGATATATACTATAGT---GTGCCATTTTTATTTT-----------------------------TTACTTGAAAATCTAAAAATATATCTTTGGAATCTCTTAACATAGTTTTACCTCATTTT--------------TTTTTAATGG------AGGCATT----TTATTTCATGAGATGCAT---------------------TGTTTGTTTTACTCACAT-------------CTTGGTATGTACTG----------------------------------TTCTACAGGTGGTGGCAAGAGATGATGATCGAGGATCTAACAGCAAACTCTCATATGTTCTGTTTGGTGGTAATGAAGACAATGCTTTTACTCTCTCAGCCAGTGGAGAACTTGGAGTAACACAGAGTCTGGATCGGGAAACAAAAGAGCGCTTTGTCTTAATGATTACAGCTACAGATTCAGGTAAGTCCATTACAC chr4 - 94230402 40139190 40139189 40141066 54089337 54089336 54091213 1877 CAGGCTCCAACTCACAGCTGTCCTTCAGCATCGCCTCCGGGGACAGCATGGGGCACTTTGGCATTGACAACAGCGGGGTGCTGAGTATCCAACAGCCTTTGGATCGGGAAAGCCAGTCTTTTTATAGCCTTGTTGTGCAAGTCCACGACATGGCCCCTCTCCCTGCCTCCAGGTACACAAGCACAGCTCAAGTTTCCATTATTCTGCTGGATGTGAACGACAGCCCTCCTAGCTTTATCTCTCCAAAGCTGACCTACATTCCAGAAAATACACCGATAGACACAATCGTGTTCAAGGCACAAGCGACTGACCCTGACAGCGGTCCAAACAGCTACATCGAGTACAGTCTGCTTAGGCCTCTGGGCAATAAATTCAGCATTGGCACTATTGACGGTGAGGTCAGATTGATTGGGGAGCTCGACAGAGAAGCTGTGTCCAACTACACATTGACTGTGGTGGCAACAGACAAGGGCCAGCCATCCCTTTCTTCATCTACAGATGTGGTAGTCATAGTCCTCGACATTAATGATAACAACCCCCTTTTTGCACAAAAGCTTTATAGAGTAGAGTTGGAGGAAAACACTTTGACAGGGACAGATTTAATCCAGGTGCTTGCTACTGATGGAGATGAGGGTACGAATGGGCAGGTTCGCTATTCCATTGTGAGTGGAGATACTGGTAACCAGTTTCGCATCGATTCTGTGACGGGGGTGATAACAGTTGCTAAGCCTTTGGACAGAGAGAAGAAACCCTCCTATATGCTGAGTGTTCAGTCCTCCGATCGTGGAAGCAGCCCAAGGACTGACACCACAACAGTCAATATTGTTCTGAAAGATGTTAATGATTACGTTCCCACATTTGAACTTTCTCCCTACAATGTGAATGTTCCTGAGAATTTAGAGACGCTTCCCAAAGTCATTCTTCAGGTGAGTACACTCAACAAATTGACATGCATTTGTTACAATTACTAG------------------------------------TACGCTT----TGGAATAT-TTTATTAATATACCTTGA----CCATTGGaaaaaaaaaaaa-----aaaaaaaaaaaaaaaagaaGACAATATTAAAAAGTTGCCTTTTGG--CCATAATTGAACAAGCAGTGGTTGTTGTTTTGTTTTCATTTTGTATTATTTTTTCTTGCTTTTTGACAAAATTTTGTATTAGGCTTTGAAGTGGGTTTTGTGTCTTCCCCAGCCCCCCCATCT--ATCTTTTTACACACTCTAGGACTTCAAGAGTTTGCCCTATTCTCTCAGCTCAGTCTCAACTTCAATGCAACAAATCTCTCCATCTGATGATTGTCCGTATAGGATGAGGCT-CTATTCCAAACACTGAAAGAACACTAAATGGATTGAGATAGCAGAATATGCAGTGTGTT--CTTTG---ATACTGAGCTCAGTCTATACCA--AGTCACCTGTGGTTTTCACTGCACCCCAATGCCATCTTTACTGTATTTAAAGTTGAGAAAGATAAGTAATTAGCTATTCTAAAATTTTCAAGCAGTGCTTTTAAGTCCATCACCACTGTTTTAAGTCATTTTACCATTACAGCTAGTTTATAATAGCCCTTAAGGTACTGGGATTAGTTCAAGCCATTAATTAGGATTAATGTCATAGAGAATATTTTCTCTACCCCAATAAAATTGTACAGACTCTGTACTTATTGGTTACTGAATTTTTTTTTTGTGTCTTTATGTTGCTTTTGTAGGTTGTGGCAAGAGATGATGATCAAGGCCTAAACAGCAAGCTTACCTATGTTCTGGTGAGTGGCAATGAAGAAGGAGCCTTTATTCTCTCAGCCAGCGGGGAGCTGCGCTTGGTGCAGAGCCTGGACCGGGAAAGGAAGGAGCAGTATGTTTTATTGATCACAGCTGCTGACTCAGGTAAAGCAAATATGC .....x:......x..::..x.:.x:.....:..:..x..x..:...x.x.....x...:x::.......x.::..x..:..x.:x:...x.x.:x................:.....:..:..:.:.:.x.....x.....x..:...x..x.x.xxx.:..x........:.x.........x........:.........:..:.......:..:..:.:...x..x.xx...x.:..:..x..::....x....................x..x..:..x:.:..x.....:..x.....:........x..:..:..:...........:..:.......x......x.:x...:....x..:..:.....:.....x..:.....:.....:..x..::.x.:...:..:..x..........xx..x..:..:..:..x:.:..x........x........:..:..:.....:..:..............x..x.....:..:..x..:.....:...............x.:.........:xx:.x....:...:...x.x:.x........x:.x..x..:......x....x..:...:.:..x:.x...........:..:..:.....:............xx......x.:...x:....:::.x.xx.:.....x..x..:.....x..:..x.:x..x..x..:.....:........:.....:....xx..:x....:xxx:.:.x.......x.xx.x.....x..x....xx..x..:.....:...x.x..:....::........:xx:...:.......:.x:.....:::......:..x.....x..:xx...:.....:.............:...:..x....:.::x...........x....:.:.:..xx..--::..x.:.-....:x:.....:x..------------------------------------.......----..xxx.x.-:.:...xx:..x.x.x:.----.x....x.:.x.x.:x...-----....::...::xxx.x:..x.:x...::x..:.---:...:..::--:.x.x.....xx..:.xx.x..xx..xx:.x.:....-......:.xxx:.:x.x....------...x.x..x......x.xx...---x..::.....----....x..:xxx:xx:....--.:x.xx.x.x.x...xx.:x:x.xx..:x.....-----------x.:..:x..:x:..x.--.x..:xx:.xx::.:...x..xx..:x..:x.:::x....-...::..-..x..xx...:x:.x.x::.:.x:.----------------.x:..x....x...::..--....:---...:.--------.:..:..x.--..x.x.xx...:.x.x:...::.x:---:......:....:.x.-----------------------------:..:.:x.....:.xx..::.xxx....x:.:..:x.:.x..:x......xx.......--------------...x....:.------...:.:.----...x....x.xx..xx..---------------------.:...x:.:...:.xx..-------------..:x...:x..:..----------------------------------..:.::....x...................:...x::x........:..:x.x.........x.x:....:........x::x..:....:............:..:..:..xx.xx.::::.....:.....:.......x:..:....:x.x...:...x....:......:.x..:........:x.x.x..::. 944M2I8M1I16M36D7M4D8M1D18M4D19M5D33M3I9M2D37M1I21M6I22M3I10M4I19M2D34M11I16M2I40M1I7M1D25M16I18M2D5M3D5M8I9M2D25M3I16M29I59M14I10M6I7M4I18M21I18M13I14M34I198M 1168/1695 68.9% 1877/94230402 0.0% 244/1695 14.4% 85275691 NA +11859 chr4 + 190214555 125434205 125434204 125434437 233 TGTTTATAAACATTGAGACTTGATTTTCTTTTCTTTT-TAGGATCCCCTGCCTTGACTGGAACTGGAACAATCAACGTCATAGTAGATGATGTCAATGACAATGTCCCCACATTTGCCAGTAAAGCGTATTTCACAACAATTCCTGAGGATGCACCAACTGGAACAGATGTTTTATTGGTAAATGCCTCAGATGCTGATGCTTCAAAGAATGCAGTTATAAGGTCAGTACATTT chr4 - 94230402 40154093 40154092 40154325 54076078 54076077 54076310 233 TATTTGTAACCTCTAGCATTCTGTATCCTGCTTTCCTGCAGGATCTCCTGCCCTCACTGGCACTGGAACCATCACTGTCACTGTAGATGATGTCAACGATAACGTCCCCACATTCGCCTTTAATATGTATTCTGCTACAGTTCCTGAGGATGCACCTACAGGGACAGATATTTTGCTAGTAAACTCCTCAGATGCTGATGCTTCTAGAAATGCTGTTATTAGGTAAGT-CATTT .:...:...x.x:.::x.:.:x:.x.:..x:.:.::.-:......:......:.x.....x........x....x:....:x..............:..:..:...........:...xx...x::.....:::.x...:................x..x..:......:....::.:.....:x...................x.::.....x.....x....x...-..... 37M1I190M1D5M 174/232 75.0% 233/94230402 0.0% 2/232 0.9% 85280112 NA +3655 chr4 + 190214555 125440508 125440507 125440631 124 TTTGTTTTCTGTTTCTCTTTTCTCTCTCTGGAAAGTAATTTGAATACTTCTCACTGCATTATTTTCTCAGTACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982259 18982258 18982354 75248049 75248048 75248144 96 tttcttttcttttttctttctttctttct---------ttt---tttttctctctctctctctctctc----------------tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x......x...:::..:.:...:...---------...---.x:.....x..x:x.:x:.:....----------------..................x.................::.. 29M9D3M3D24M16D40M 75/96 78.1% 96/94230402 0.0% 28/96 29.2% 106458249 83756306 +3879 chr4 + 190214555 125440512 125440511 125440633 122 TTTTCTGTTTCTCTTTTCTCTCTCTGGAAAGTAATTTGAATACTTCTCACTGCATTATTTTCTCAGTACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982258 18982257 18982354 75248049 75248048 75248145 97 Ttttct-tttcttttttctttct--------------------ttctttctttttttttctctc----tctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ......-.....:......:...--------------------....:x..x:x..x..:....----::.x.x.x.x.x.x....................................::.. 6M1D16M20D21M4D54M 78/97 80.4% 97/94230402 0.0% 25/97 25.8% 106458254 83756301 +3357 chr4 + 190214555 125440520 125440519 125440635 116 TTCTCTTTTCTCTCTCTGGAAAGTAATTTGAATACTTCTCACTGCATTATTTTCTCAGTACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982258 18982257 18982354 75248049 75248048 75248145 97 Ttttcttttcttttt-----------------tctttctttctttctttttttttc--tctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..:........:.:.-----------------.x:....:x..x:x..x....:..--.x::.x.x.x.x.x.x.x................x...................::.. 15M17D24M2D58M 72/97 74.2% 97/94230402 0.0% 19/97 19.6% 106458262 83756293 +3102 chr4 + 190214555 125440592 125440591 125440627 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 43811528 NA +3316 chr4 + 190214555 125440594 125440593 125440629 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 43811530 NA +3102 chr4 + 190214555 125440596 125440595 125440631 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 43811532 NA +3165 chr4 + 190214555 125440598 125440597 125440651 54 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTTATT chr4 - 94230402 18982315 18982314 18982362 75248041 75248040 75248088 48 tGTGTGTGTGTGTGTGT------GAGAGAGAGAGAGAGAGAGGAAGGATTTATT ..............x.x------...................::..:....... 17M6D31M 43/48 89.6% 48/94230402 0.0% 6/48 12.5% 106458283 83756272 +14753 chr4 + 190214555 125446291 125446290 125446549 259 AGTTATAGGATCATCGGTGGAAACTCTCAGTTCACGATCAACCCATCGACAGGACAAATCATCACCAGCGCATTGTTAGATAGGGAAACAAAAGATAATTATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGTTCCACCAGTGTGCTTGTCACTGTGACTGATGTCAATGACAATCCACCAAGATTTCAGCATCACCCATATGTCACTCACATCCCATCTCCTACTCTTCCAGGTAATC chr4 - 94230402 40157925 40157924 40158183 54072220 54072219 54072478 259 AGCTATAGACTTACTGGTGGCAATTCTCAATTCACAATCAACCCATCAACAGGACAGATCATCACCAGTGCTCTACTTGATCGAGAGACAAGAGAGAACTACACATTGATTGTTGTGGCAAGTGATGGGGGCTACCCCAGGGCTCTTTCCAGTTCCACCAGTGTGCTTGTTGCTGTTGCTGATGTGAATGACAACCCTCCCAAATTTCAACACCATCCCTATGTCACTCATGTTCCATCGCCTACTACTTCAGGTAACC ..:.....:x.:.::.....x..:.....:.....:...........:........:...........:..x:.::.x...x.:..:....:...x..:..:..x...:.x..x..xxxx.......x...x.x...x::.x............................::....x:.......x........:..x..x.:......:..:..:..x...........::.:.....x......x:.:.......:. 259M 198/259 76.4% 259/94230402 0.0% 0/259 0.0% 85288366 NA +236293 chr4 + 190214555 125448448 125448447 125452834 4387 TTCTCTTTTATAGGTTCCTTTGTCTTTGCGGTTACAGTCACAGATGCTGATATTGGACCAAATTCTGAACTGCATTATTCTCTTTCGGGTAGAAATTCTGAAAAATTTCACATTGACCCACTGAGGGGAGCCATTATGGCCGCCGGACCACTAAACGGAGCTTCAGAAGTGACATTTTCTGTGCATGTAAAAGATGGTGGCTCATTTCCAAAGACAGATTCTACAACAGTGACTGTTAGATTCGTGAATAAGGCCGATTTCCCTAAAGTGAGAGCCAAAGAACAAACGTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCTTGTCACCACCATCACAGGATCCTCTTTAAGAGGAGAACCTATGTCATATTATATCGCAAGTGGGAATCTTGGCAATACTTTCCAGATTGATCAGTTAACAGGGCAGGTGTCTATTAGTCAACCTCTGGATTTTGAAAAGATACAAAAATATGTTGTATGGATAGAGGCCAGAGACGGTGGTTTCCCTCCTTTCTCCTCTTACGAGAAACTTGATATAACAGTATTAGATGTCAATGATAATGCCCCAATTTTTAAGGAAGACCCATTTATATCTGAAATATTGGAAAACCTTTCCCCTCGAAAAATACTTACTGTTTCGGCAATGGACAAGGACAGTGGACCCAATGGACAGTTAGATTATGAAATTGTTAATGGCAACATGGAAAATAGTTTCAGTATCAATCATGCTACTGGTGAAATTAGAAGCGTTAGACCTTTGGACAGGGAAAAAGTATCTCATTATGTCCTAACCATAAAATCATCAGACAAAGGGTCCCCGTCTCAGAGTACTTCAGTAAAAGTCATGATTAACATTTTAGATGAAAATGATAATGCCCCTAGGTTTTCTCAGATATTTAGTGCCCATGTTCCTGAAAATTCCCCCTTAGGATACACAGTTACCCGTGTCACAACTTCTGATGAAGACATTGGGATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTACAATTAATCCCAGCACAGGGGATATTGTCATAAGCAGACCTTTAAATAGGGAAGATACAGACCGTTACAGAATTCGAGTTTCCGCACATGATTCTGGGTGGACTGTAAGTACAGATGTCACAATATTTGTGACAGACATCAATGACAATGCTCCAAGATTTAGCAGAACTTCCTATTATTTAGATTGCCCTGAACTTACTGAGATTGGCTCCAAAGTAACTCAGGTATTTGCAACAGATCCTGATGAGGGATCAAATGGACAAGTGTTTTATTTCATAAAATCCCAATCAGAATATTTCAGGATTAATGCCACCACTGGAGAGATTTTCAATAAACAGATCTTAAAATACCAAAATGTCACTGGCTTCAGTAATGTGAATATCAACAGGCATAGTTTTATAGTGACATCTTCAGATCGAGGTAAACCTTCCTTAATTAGTGAGACAACAGTTACCATCAATATAGTGGACAGTAATGACAATGCACCTCAATTTCTTAAAAGTAAATATTTCACTCCAGTCACCAAAAATGTTAAGGTTGGTACGAAGTTAATCAGAGTTACAGCAATAGATGACAAAGATTTTGGACTGAATTCAGAAGTGGAGTATTTCATTTCTAATGATAACCATTTAGGAAAATTTAAGTTGGACAATGATACGGGGTGGATTTCAGTAGCATCCTCCCTGATTTCTGACTTGAACCAAAACTTTTTTATCACAGTCACTGCAAAGGATAAGGGAAACCCTCCACTTTCTTCCCAAGCAACTGTTCACATAACTGTCACTGAGGAAAACTACCATACACCTGAATTCTCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCCATAGCATTGGGTCCATTGTCAGAACTGTTTCTGCAAGAGATAGAGATGCAGCGATGAATGGCTTGATTAAGTACAGCATTTCTTCAGGAAATGAAGAAGGCATTTTTGCAATCAATTCTTCTACAGGTATATTAACACTAGCCAAAGCTCTTGATTATGAGCTATGCCAGAAACACGAAATGACGATTAGTGCTATAGATGGAGGATGGGTTGCAAGAACTGGTTACTGCAGTGTGACCGTAAATGTGATTGATGTGAATGATAATTCTCCAGTATTCCTCTCTGATGACTATTTCCCTACTGTTTTGGAAAATGCCCCAAGTGGAACAACAGTTATCCACCTAAATGCAACAGATGCTGACTCTGGAACAAATGCTGTGATTGCGTATACTGTACAGTCATCTGACAGTGACCTCTTTGTCATTGACCCTAACACAGGAGTCATAACCACTCAAGGCTTCTTGGATTTTGAAACCAAGCAGAGCTACCATCTTACTGTGAAAGCCTTCAATGTCCCCGATGAGGAAAGGTGTAGCTTTGCCACTGTTAATATACAATTAAAAGGGACAAATGAATATGTGCCCCGTTTTGTTTCCAAACTTTACTATTTTGAAATCTCAGAAGCAGCTCCTAAAGGTACTATTGTTGGAGAAGTGTTTGCTAGCGACCGTGATTTGGGCACTGATGGGGAGGTACACTATTTGATTTTTGGTAATAGTCGAAAGAAGGGTTTCCAGATCAATAAGAAGACTGGACAGATTTATGTTTCTGGAATTCTTGATCGAGAAAAAGAAGAAAGGGTGTCTTTGAAGGTATTGGCCAAGAACTTTGGCAGCATTAGAGGTGCAGATATAGATGAGGTCACTGTAAATGTCACCGTGCTTGATGCAAATGACCCACCCATTTTTACTCTAAACATCTACAGTGTGCAGATCAGTGAAGGGGTCCCAATAGGAACTCATGTGACCTTTGTCAGTGCCTTTGACTCAGACTCCATCCCCAGCTGGAGCAGGTTTTCTTACTTCATCGGATCAGGGAATGAAAATGGTGCCTTTTCTATTAATCCGCAGACAGGACAGATCACCGTTACTGCAGAATTAGATCGAGAAACCCTTCCCATCTATAATCTCTCAGTTTTGGCTGTTGATTCAGGGACCCCCTCAGCTACAGGTAGTGCCTCTTTATTAGTCACCCTGGAAGATATAAATGATAACGGGCCCATGCTGACTGTCAGTGAAGGAGAAGTCATGGAAAACAAACGGCCAGGCACTTTGGTGATGACCCTTCAGTCCACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTATTACTTGCTGAGCACAGGTCCTGCCACCAGTTATTTCAGTCTGAGCACTGCTGGAGTTCTGAGCACAACCAGAGAGATTGACAGAGAGCAGATTGCAGACTTCTATCTGTCTGTGGTTACCAAGGATTCTGGTGTTCCTCAAATGTCTTCCACAGGAACTGTGCATATCACAGTTATAGACCAAAATGACAATCCTTCACAGTCTCGGACGGTGGAGATATTTGTTAATTATTATGGTAACTTGTTTCCCGGTGGGATTTTAGGCTCTGTGAAGCCACAGGATCCAGATGTGTTAGACAGCTTCCACTGCTCCCTTACTTCAGGAGTTACCAGCCTCTTCAGTATTCCAGGGGGTACTTGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTGATCTGACTGTCCTTAGCAATGATGGAGTTCACAGCACAGTCACGAGCAACATCCGAGTTTTCTTTGCTGGATTTTCCAATGCCACAGTGGATAACAGCATCTTACTTCGTCTCGGCGTACCAACAGTAAAGGACTTCTTGACCAACCACTATCTTCATTTTTTACGCATTGCCAGCTCACAGCTGACAGGCTTAGGGACTGCTGTGCAACTGTACAGTGCATATGAAGAGAACAATAGAACGTTTCTTTTGGCAGCTGTGAAGCGAAATCATAATCAGTATGTGAATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCGGCAGAGTGGAGTAAAGGTGGAATCTGTGGATCATGACTCCTGTGTGCATGGCCCATGTCAGAATGGAGGGAGCTGTCTACGAAGATTGGCTGTGAGCTCCGTATTAAAAAGCCGTGAGAGTCTTCCAGTCATCATCGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGGTAGCTGGTGTGAAATAGATATAGATGAATGTCTTCCATCACCTTGCCACAGTGGTGGAACCTGTCACAATTTAGTGGGAGGATTTTCATGCAGCTGCCCAGATGGCTTCACTGGTAGGGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGTGTTTGCAAAACTGGATACACAGGTATGACAACGTTTGTACTTTTCT chr4 - 94230402 40161009 40161008 40165389 54065014 54065013 54069394 4381 TTCTCCATTTCAGGTTCGTTTGTGTTTGCAGTGACTGTCACTGATGCAGATGCCGGCTCCAACGCAGAGCTCCATTATTCCCTCATGGGGAAAAACGCAGAGAAATTCCACATTGATTCAGCAAGGGGGGCAATCCTAGCTGCCAATGAACTGTCAGGAGAGTCTGAAGTCACCATTTCTGTCCACGTGAGGGATGGCGGCCGGTATCCCAAGACAGATTCTACAACTGTCACCGTGAGGTTTGTGAACAGAGCAGAATTTCCTCAAGTTCAAGCCGAACAGGAGACTTTCACTTTTCCTGAAAATCAAGCAGTTGGGACACTTGTCACCACCATTTCTGGATCTTCAGCCAGAGGAGGCTCCTTGTCCTACTATATTGCCAGTGGGAACCTGGGCAACACCTTCATAGTGGATCAGGTAACAGGACAGCTTTCTGTCGGCCAGGCTTTGGATTTTGAAGCCATACAGAAATATGTGGTTTGGATTGAGGCCAGAGATACAGGCTTTCCTCCCTTTTCCTCGTATAAGAAATTGGAAGTAACGGTTGTAGATGTCAATGATAACGCACCGGAGTTTGAGCAAGATCCCTTCATTGCTGAAATAGTGGAGAATCTGTCCCCACGGAAGTTATTGACAGTGGCTGCTGTTGACAGGGACAGTGGTCTAAATGGACAGTTAATTTATGAAATAATTGAGGGCAATACAGAAAATAGTTTCAGTATCAACAGAGCCACTGGTGAGATCAGGAGTGTCAGGCCCTTGGACAGGGAGAAATTGTCTCGATACACACTGACCATAAAAGCTTCAGATAAAGGCACCCCGCTCCAGAGCACAACCGTCAAAGTTATCATTAATGTTTTAGATGAAAATGACAACGCCCCAAGATTTTCCCAGATATTTAGTGCTTCTGTGCCTGAAAATGCACCTCTGGGTTTTACAGTAACCCGAGTCACAACTTCAGATGAAGACATTGGCATGAATGCAATCAGTAGGTACTCCATAAGGGATACAAGTCTTCCATTTGTCATAAATCCAAGCACTGGGGATATCACAGTCAGCAGACTGCTAAACAGAGAGGATACGGATCGCTACCGAATCAGAGTTTCTGCTCATGACTCTGGCTGGACAGTGAGCACAGACGTCACCGTTTTTGTCACTGATGTCAATGACAACGCTCCACGATTTACAAAACCATCCTATTATTTGGAGTGTCCTGAGCTCCCTGGGATTGGGTTGAAAGTCACTCAAGTTTCAGCCACTGATCCCGATGAAGGATCTAATGGTCATGTCTTCTACTTCATAAAATCTCAATCTGAGTTCTTCCGTATCAATGCAACCACGGGGGAAATTTTCAACAAACAGTATTTAAGGTACCAAAACTCAAGTGGTTCAAGCAATGTCAACATAAACAGGCACAGCTTCATTGTGACTTCTTCAGACCGTGGCAGTCCTCCACTGCTGAGTGAGACAACTGTCACAATTAACATAGTTGACAGCAATGACAATGCACCACTGTTCCTTGCTCCTAAATATTTTACGCCTGTTACTAAGAATGTGAGAGCTGGCACAAACTTAATTAAAGTTACTGCAGTGGATGACAAAGACTTCGGTTTGAATTCTGAAGTGGAATACTTTGTTTCTGATGAAAGCAAAACTAATAAATTCAGATTGGACAGGAGTACAGGCTGGATTTCTGTATCATCTTCACTAATGGCTGATTTGAACAAAAAATTTCTGTTTAAAGTAAAAGCAAAGGATAAAGGTAATCCTCCACTGTCATCTGAGGTAGCTGTTGAAATAGTCGTAACCGAGGAAAACTACCATACACCTGAGTTTTCTCAAAGCCATATGAGTGTTACTATCCCGGAGAGTCACTCTGTTGGAGCAGTGATCAGGACGGTTTCAGCCCGAGACAGAGATGCCGCTATGAATGGATTAATCAGATATAATATTTCCTCTGGAAATGAGGCTGGCAACTTTGCTATCAACACAACTACTGGTACACTGACACTAGCAAAACCACTTGATTTTGAGTTATGCCAAAAGCATGAGCTAATTGTTACCGCCACAGATGGAGGATGGGTGTCCAGAACAGGCTTCTGCAGTGTCACCATTAATGTCATTGATGTGAATGATAATTCTCCAACATTCAGCCCTGAGGACTACTTTCCCAATGTATTAGAAAATGCCCCAAGTGGGACAACTGTTATTCGTTTAAATGCCAGTGATGCTGACTCTGGACCTAATGCTGTGATTGCATATGCTATTCAGTCCTCAGATAGTGACCTCTTTGTCATTGACCCCAATACAGGAACGATCACTACCCAAGGATTTTTAGATTATGAAACAAAGCAAAGTTACCATTTAACAATAAAGGCTTTTAATGTTCCAGATGAAGAGAGGTGCAGTTTTGCCAGTGTCAACATCCAGTTAGAAGGGACTAATGAATATGTGCCCCGTTTTGTGTCCAAGCTTTATTATTTTGAAGTTTCTGAGGCAGCGTCTGAAGGTACCATTGTGGGTGAAGTTTTTGCAAGTGATCGTGATCTGGGAACTGATGGAGAAGTTCACTACCTTATCTTCGGCAATAGCAGAAAGAAGGGCTTCCAGATAGATGAAAGAAGTGGCCAGATCTATGTTTCAGGACCTCTTGACAGAGAAAAAGAGGAACGAATCTCTTTGAAAGTTCTTGCAAAAAATTTTGGAAGCATTCGTGGTGCAGATATAGACGAAGTAACTGTTAATATCACTATACTGGATGCCAACGATCCTCCTGTATTCACTTTAGGAACTTACAACATACAAATTAGCGAGGGTGTTCCTCCAGGCACCCATGTCACATTTGTGAGTGCCTTTGATTCAGATTCTGTCCCTAGCTGGAGCCGGTTTTCCTATTTCATTGGGTCTGGTAATGACAACAGTGCCTTTTCCATCAACCCACAGACAGGACAGGTCACTGTCACTGCAGAACTGGATCGAGAAACTCTGCCTGTGTACAACTTGTCTGTGCTAGCCATTGATTCAGGAACACCATCTGCAACAGGCAGTGCCTCTTTATTGGTAACTTTGGAGGACATCAATGATAACGGTCCCACCCTGTCCACCCGCCAGGGAGAAGTCATGGAGAATAATCGTGCAGGAACTCTCGTAATGACACTTCAATCGTCAGATCCCGATCTCCCTCCAAACCAAGGCCCCTTTACGTACTACTTACTCAGCACTGGCCCTGCAACCAGTTACTTCAGCCTTAGCACTGCCGGAGTCCTGACCACAACAAGGGAGATCGATCGGGAGCAAATCAGTGATTTCTACCTGTCAGTGATTACAAGAGACTCTGGCATTCCTCAAATGTCTTCCACAGGAACTGTTCAGATAAAGGTAATAGACCAAAATGACAACCCATCTCAGCCCAGAACGGTAGAAATCTATGTTCACTATTATGGCAACCTCTTCCCAGGAGGAATTCTGGGCAATGTAAAGCCGCAGGACCCAGATGTGTTAGACAGCTTCCAGTGCTCCCTCACATCAGGAGTCACCAGCCTCTTCAGTATTCCTGGGGGCACCTGTGAGCTGCACTCACAGGCCAGGTCCACAGATGGGGTGTTTGACCTGGCTGTGCTCAGCAGTGACGGCCTACACGGTGCTGTCACAAGCAGCGTCCGCATTTTCTTTGCGGGTTTTGGCAACGCCACCATTGACAACAGCATCCTTCTCCGCTTGAGTGTCCACACTGTGCGGGATTTTCTGACGAACCACTACCTCCATTTTCTGCGCATTGCCAGCTCTCAGCTGACAGGGCTGGGCACTGCCGTGCAGCTCTATGGGCTGTATGAGGAGAGCAACCAGACCTTCCTGATGGCGGCTGTCAAGCGCAGCAGCAACCAGTACGTGAACCCCAGTGGCGTGGCCACCTTCTTCGAGAGCATCAAAGACATCCTCTTCCGGCAGAGTGGGGTGCGGATTGAGTCTGTGGATCACAACTCGTGCCTGCAGAGCCCGTGCCAGAACGGAGGGAGCTGCATGAGAAGGCTGGCTGTAGGTCCGGCCTTGAAGAGCCACGAGAGCGTCCCTGTCATCACCATGGCCAACGAGCCCCTCCGGCCCTTTGTGTGCAGATGCATGCCAGGGTACGAAGGCAGCTTGTGTGAGATTGACATTGATGAATGCCTCCCTTCTCCATGTCACAATGATGGGACCTGCCACAACTTGGTGGGAGGATTCTCATGCAGTTGCCCAGACGGCTTTACCGGCATGGCCTGTGAGAGGGATGTCAATGAGTGCCTTTCCAACCCGTGCAAAAATGGGGCCGCCTGCCAGAACTTCCCTGGAACCTTCAACTGTATTTGCAAAACTGGGTATACAGGT------ACACTTTTACTTCTCT .....:x..x:......x.....x.....:..x..x.....x.....x...:::..x:.x..:x.x..:..x........:..:x:...x.:...:x.x..:.....:........::..x::.....:..x..:x.:..:...::xxx...:xxx....xx..x.....x..xx.......x..:..:.::.....:...:x:.x...x.................x..x..:..x..:..:.....:.::..x..x..:...x....xx:....:..x.:x.:..x....:x...........:...x....::.xx.x..............:x.x.....:..xx:x.......:x:.:x....x..:.....:..x........:..x.....:..:...xx::.x......x.......:...x.x...:.::.:..:x..:...........:xx.....:........x..x.....x...........::xx..:..:.....:..:.....x..::.....:.x..x:....:..xx................:..x..::xx...:..x....:..x..:..xx........x....:..:..x.....x..:..:x..:.x..x..xx.x..x:.x....:.........x.:x............:x.........x:..:.x.....:.::....................:x:x..:........:..:..:..:..:..:..:...........:...x.:....:x..:::x..:.........x.x.....:.....xx.....:::.....:..xx.x..x.....:..x.....::................:..:.....x..:.....:..............::x...x.........x.x..::.:..x.x:.....x.....x...........x..............x..x........:.....:..:..:....x....:..............::x..x.....x.....x........:::x:.x.......:x:....:..:..:.....:..:..:...x....:x.......:..x.....:.....x.....x..:..:.....:.....x:.x.....x..x..::..........:......x......xx.:.x.x...........:..x..:.....:..:x...:......x.:x.....x.....:..x.:x..x..x.....:.....:.....x.....x..x..x..:..:...........:.....x..:.x:...x.x..:.....x.....x..:..:........:......xx:....::........:x:x.x...:.:x..:.....x..:..x........:..:..:..x.....x........:..x..:.:x...:.x:.:x.x...........x..:..x..:..:.....x.....:..............x.x:..:...:xxxx.........:..x..x..:..:..:.....x.::.:...:..:..x.....:.:......x...:.:...........:..:..x:.......x........:..:..::.....:....x.:.x.xx:x::x.....:.::.......:x::...:..x........x...x....:..x..:..xx....:......x....x...:.xx.:.x...x.xx...........:..x..:........x..x..:x.:.:.:.....x.x...:::..x..:.......................:..:...........:.......:x..:.....x.....:..:xx::....:x.x:.x:....:..x.....x..xx....:........x..x........x..:..:.::..:.::.....:..x........:.xx....x:.....x.....:x.xx....x....:.:.:........x...x.x.......x....:.......:..:..:..:x.:.:x:...x:..:.:...............xx.x.....x..:.x.........x...:.x.....x........................::....xx.:....x.....:..:..:.x...x..:.................:.....x.....:.:::.......x.xx...............x.x..............:...:..:.x.....x..x..:.......................:..:......::x..x..:..:.....x..:..:....x......x.....:..:......:.x..x:.:..:..:..:.....:..x.....:..:.....:..:.......x...:..:..x..:...:.......x.......................x.....:.....:.........:.:..x..:.....x:..:.......:.....x..x.....x.....x..:..:......:....x........:..:..x.....::.x..:..:..:.....:x..........:........x:..:.:.::.x...x.....:........x...x:......:x..........:...x.::.x........:..x:.x..x..:..:.....x......x.x..............:..:..x.....x...:....::.:..x.....x..:..:..x..::.x..:...:..::x.::....:::.:..:..:..:..:..x..:..xx:...x..:.....x..x.....x...........:.....:..::....:.........x.......:..:.....:..:..x..x.....x..::..........:..:..:..:............:....:..:.........:.:...........:..x..::.x..:..::.x..x..x:.:..::..........:..x..x..x..x.....:..............:..x..::....:..:..x...........x....:x...x.:::.x.:x.:..............:..:..x..xx....x...:.x..:.....x.....:..xx.x..:..:..............:.....:........x..:.....:..x.....x..:.....x........:.....:..x........:.....:....x......x..:.....:..:x.:.....:..::xx..:.....:.....x...:....x.::..:.....::............................x..x..x.x:..x.................:..x..x...:.:x.:.....:..:..x.x....x.:........:...:.x..:..x..x..:...:.:...xx...:.....:.....:.......................x........:..x........:....................x.....:..:.....x...x.:..x...x.x..............x::......:...:....x..:....:...:..xx.x...:.::.x.....:....:.:....x:..........x..x...xx...:.....x:.x..:.........:.x..:..::.x:.:..x.xx..x..:x:...:..::....x........:..:......:.:..............x...........x:.:..x.....:.....:..x..::.xx::.....:....:...:x::..x..:..xx....:.....x.....x.::x::..:.....:.....:...........:...........:..:...........x.....::.............:..:x:.:.x..:...........::....x..:x....x:....:..:.....:...........:x.:x....::.......::.::.x.:x..:..:....::.....:x.:..x.......:.:....x..:..:..:..x.:...:..:x.:....::..:x.......:..:.x:..:....x......:..x..:..x........:..:..x..x..x..:....:..:...:.....:.....:..:...........:........:........:.....:..:..:.x...x........:...:.............x:xx.::..x.....:.....x...::.........:..:..x....x..........:.............:..:......------..::..x.....:... 4365M6D16M 3284/4381 75.0% 4381/94230402 0.0% 6/4381 0.1% 85287439 NA +3336 chr4 + 190214555 125450923 125450922 125451075 153 TACTATTTTGAAATCTCAGAAGCAGCTCCTAAAGGTACTATTGTTGGAGAAGTGTTTGCTAGCGACCGTGATTTGGGCACTGATGGGGAGGT-----ACACTATTTGATTTTTGGTAATAGTCGAAAGAAGGGTTTCCAGATCAATAAGAAGACTGGA chr4 - 94230402 72913057 72913056 72913209 21317194 21317193 21317346 153 TACCACGTTCACGTCAAAGAAGGCCTCCCTGTCGGTAGCCATGTCACAGAAGTTTTAGCAAATGACCCTGATGCAGGCAGTAATGCAGAGATCACTTATGCTAT--AACTTCTGGAAATGAC---AAGCAGTATTTTCAGATGGATGGGAAAACTGGA ...:.:x..x.x:..xx.....xxx::...:xx....x:xx...::x......x..x..x.::....x....x::....x.:...x:...:.-----.::....--:.:..:...x...:::---...x..x:...:.....x:..::...:...... 92M5I7M2D16M3D33M 93/148 62.8% 153/94230402 0.0% 10/148 6.8% 52537866 NA +7453 chr4 + 190214555 125463561 125463560 125463674 114 AGGGAAAATGTGTGAATCTTCAGTCAATTACTGTGAATGCAACCCCTGCTTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTCTTATTATTGTCATTGTCCATTTGGTGAGTA chr4 - 94230402 40172577 40172576 40172690 54057713 54057712 54057826 114 AGGGAAAACATGCGACTCCACAGTCAATTACTGTGAATGCAACCCCTGTTTTAATGGTGGGTCCTGCCAGAGTGGGTTGGAAGGGTACTACTGCCATTGCCCCTTTGGTGAGTA ........::..:..x..:x............................:...........x........:.....xx....xxxx..:..:..:.....:..x........... 114M 94/114 82.5% 114/94230402 0.0% 0/114 0.0% 85290984 NA +3156 chr4 + 190214555 125463987 125463986 125464117 131 TCTTTCACGTCACTCTCTATTTCAAATCTTTAAGAGTAGTCAAAGTAAGGTTTTTTGTTTGTTTCACTTTT--------GTGAATTTTGCTTTATTTTTTATTTTTGTTTTTTACATTAGTTTTTAATTTTGTTTTTTA chr4 - 94230402 20968377 20968376 20968509 73261894 73261893 73262026 133 TCTTTGACATTTTCTTTTAAATTAATTGTTCATTAAAAGCTTGTGTAAGA------ATTTATTTCATGTTATGAAAACAGTGAATGTAACTGTAATTTTCATTTATGTTCATTACTTTATTTTTTTATTTTGTTTTTCA .....x..:.:x:::.:..xx.:..x.x..:.xx.:x..::x:x.....:------:...:.....:x..x--------......x.x:..x..x....:....x....:x....x...x.....x...........:. 50M6D15M8I60M 83/125 66.4% 133/94230402 0.0% 14/125 11.2% 104495610 85718945 +19122 chr4 + 190214555 125468477 125468476 125468828 352 ATTTTATGCCAGTTTGTCAATTTTCCCTCCAACAGGTGTCTTTGGAAAACACTGCGAGTTGAACAGTTATGGATTTGAGGAGTTATCATACATGGAATTTCCAAGCTTGGACCCCAATAACAACTATATTTATGTCAAATTTGCCACGATTAAAAGTCATGCCTTATTGCTTTACAACTATGACAACCAGACAGGCGACCGGGCTGAGTTTTTGGCCCTTGAAATTGCCGAAGAAAGACTAAGATTCTCTTATAATTTAGGCAGTGGTACATATAAGCTCACCACCATGAAGAAGGTGTCAGATGGACATTTTCACACTGTGATTGCCAGGAGAGCAGGAATGGTAAGATAT chr4 - 94230402 40173546 40173545 40173895 54056508 54056507 54056857 350 ATCTGCTACCAGATTTT--ATTTTTTGTTTTGCAGGTGTTTTTGGGAATCATTGTGAACTGAATAGTTATGGATTTGAAGAGTTGTCCTATATGGAGTTTCCCAGTATGGATCCAAATAATAATTATATCTACATAAAGTTTGCCACTATAAAAAGGAATGCTTTAATGTTGTATAACTACGATAACCAAACTGGAGAACGGGCAGAATTTCTGGCTCTGGAAATAATAGAAGGAAGGCTGAGATTCTCTTATAATCTTGGCAGCGGCACGTACAAGCTTACCACAACTAAGAAGGTGTCTGATGGACAATTTCACACAGTTATTGCCCGGAGGGCTGGAATGGTAAGAAAT ..:.xx.:....x..x.--.....::x.::x:.......:.....:..x..:..:..::....:..............:.....:..x..:.....:.....x..:x....:..x.....:..:.....:..::.x..:........x..x.....xx....:...x..:.x..:.....:..:.....:..x..x..x.....x..:...:....:..x.....x::x....:...:..:...............:.x.....:..:..:..:.....:.....x.:x...........x........x........x..x......x....:..x............x.. 17M2D333M 267/350 76.3% 350/94230402 0.0% 2/350 0.6% 85294931 NA +6258 chr4 + 190214555 125476164 125476163 125476265 102 TTCGTAGGCAGCCTCCTTAACTGTGGACTCCTGTTCTGAGAACCAAGAGCCAGGATATTGTACTGTCAGTAATGTGGCAGTTTCAGATGACTGGTAAGGAAT chr4 - 94230402 40177603 40177602 40177704 54052699 54052698 54052800 102 TTTGCAGGCAGCATCACTGACAGTGGATTCCTGCTCTGAGGATCAGGAGCCAGGCTATTGCACTGTTAGCAATGTGGCTGTTTCCACTGACTGGTAAATAAT ..:.:.......x..x:.:..x.....:.....:......:.:..:........x.....:.....:..:........x.....x:x..........:x... 102M 80/102 78.4% 102/94230402 0.0% 0/102 0.0% 85298561 NA +13111 chr4 + 190214555 125477114 125477113 125477349 236 TCTTTTGACACTAATATTTATATCTTCCATTATTTATTTAGGACTCTTGATGTTCAGCCAAATAGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCTTCAGAGAAGAGGACACGTGGAAAGCCATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACAAGGCATCCTAGATCAGTATGGCGATTTTAT chr4 - 94230402 40178969 40178968 40179200 54051203 54051202 54051434 232 TCTGATGTCATTAAACCTTTTTTTTTCT----TTCTTATAGGACCCTTGATGTACAACCAAATCGACTTACCGTTGGTGGTATCAGGTCTGTTGAGCCCATCCTTCAAAGGAGAGGACAGGTGGAAAGCCACGATTTTGTGGGCTGTATAATGGAGTTTGCAGTCAACGGACGTCCCCTGGAGCCAAGCCAGGCTTTGGCAGCTCAAGGAATCTTAGATCAGTATGTCTGCTATAT ...xx..x..:...xx:..x.x.:...:----..:x.x......:........x..:......x..x....x.....x........:...x.x..:..x........:..:........x...........:........x..x.......................:...x.x..:.....:..x.....:...........x.....x...:............x.x::.x... 28M4D204M 185/232 79.7% 232/94230402 0.0% 4/232 1.7% 85298145 NA +8640 chr4 + 190214555 125479688 125479687 125479868 181 AACTTCTCCTCATCTTTTATGTGCGTTATTGTTCTCATTAT----------GATTTATTTTAGATGCCCTAGGCTGGAAGGCGCTTGTACTCGCAGCCCATGCCAACATGGTGGCACATGTATGGATTACTGGTCATGGCAGCAGTGTCATTGCAAAGAGGGACTCACTGGGAAATACTGTGAAAAATGTA chr4 - 94230402 40179992 40179991 40180181 54050222 54050221 54050411 190 AACTTTTGCTCTGCTTGTTTGTACAC-ACATTCCTCAGTATCTGCTTTTCTGCATTATTTCAGATGTCCTCGATTAGAAGGTGCTTGTACAACTAGCCCCTGCCAACATGGTGGCACCTGCACTGATCACTGGTCATGGCAGCAATGCCAATGCAAAGATGGACTGACGGGAGACCACTGTGAAAAATGTA .....:.x...xx...x.x...:.::-.:xx.:....x...----------.xx......:.....:...x.::.:.....:........xxx:.....x.................x..:.:x...:................:..:..x........x.....x..x..::.x:............... 26M1D14M10I140M 137/180 76.1% 190/94230402 0.0% 11/180 6.1% 85299696 NA +20094 chr4 + 190214555 125481515 125481514 125481970 456 TTCCAGCTGTTACTCCTGACACTGCCTTATCATTAGAAGGCAAAGGGCGCTTGGACTACCACATGAGTCAGAATGAGAAGCGGGAATATTTGTTAAGGCAAAGCTTACGAGGTGCCATGTTGGAGCCTTTTGGTGTGAACAGTCTGGAAGTAAAATTTAGGACCAGAAGCGAGAATGGCGTTTTAATCCATATCCAAGAAAGCAGCAATTACACTACTGTGAAGGTGAGATAAAAGCTAATGGTGA-CTTCATTTGATTAGACCGCCTGCCGTGTAGTGGTTTAAATCAC-TTCCCCCATAATTTCTGTCCTTTTCTTTACAACCCATTAGAGTTCCGACTAATGCTGGGCACTATTCCAATGTCATCTATCTT---AACTATTCCCCAGGCATTGGCCAGAGTAACA-AAGATCTGAATGGTTTGGTTTCTACACACTTTTGTGTTGCTTTAGAGTAGAGA chr4 - 94230402 40181293 40181292 40181754 54048649 54048648 54049110 462 TCCCAGATATTACTGCCGACACTGCCTTATCACTGGAAGGCAAAGGACGACTTGACTACCACATGAGCCCAAATAAGAAGCGTGAATACATGATGAGACACAGTGCTAGAGGTGCCAGCCCAGGACCTCTGAACGTGGACAGCTTGGAAGTGAAGTTCAGAACAAGAAGCGAGAATGGGATTTTATTTCACATCCAGGAAAGCAGCAACTTCACTACCGTGAAGGTAAGATTGCAGCTAATGCTGAGTTTGATTTGATTGGTCTGCTTCTTGTGCAATGATCAAAATCATATTTTTCCATTACTCTTGCCGTTTCCTTTGTAAAATATTAGGTCTTTAACTAAGGCTAGGCAGTGCGCCAGTATCATTCATCTTCTCAACAATTGCCTTGCTATTTGCCAAGGTATCAGAAGATCTTGATGGCTTTGTATCTAAGCAGTTTTGTCTAGACTCCAAATAGTGA .:....x.:.....x.:...............:.:...........:..x:.x..............:.x:...:.......x.....:x..x.:..:..x..:x:xx.........xx:::.::...:.x:::...:....::.......:..:..:..:..x..............x:.....x.:..:.....:...........:.x......:........:....x:x........x...-:..x........:.x.:..:.x::...:.:..:.:x......:-..:::....x.:.::..:.x...:....::..xx:.....:x:.:::.....x...:....x.::x...:.:....::.....---...x...x..:x.x:...x....::...x..-.......x:....:..x..x....x:..x......x.x.x:.:x:.:...x.. 246M1I43M1I83M3I31M1I53M 322/456 70.6% 462/94230402 0.0% 6/456 1.3% 85300222 NA +11186 chr4 + 190214555 125487188 125487187 125487583 396 TTAGAGACAAAGTGTGTAAGTATATTCTAATACAACCAGATTCTTCAGCTATTCTATCTGCTGTGGACTGGTCAAAAATTTAAGTTTAGTTTTGTTAATG-----------ATTTTTATTTAAGCATACCATATTTTAATTGCATACTATTTTTAATATGTTTTA-CAGATTAAGAATGGCAAAGTATATTTTACATCCGATGCAGGAATTGCTGGGAAAGTGGAGAGAAATATTCCTGAAGTATATGTTGCAGACGGCCACTGGCACACTTTTCTAATTGGGAAAAATGGAACAGCAACAGTATTGTCTGTTGACAGAATATATAACAGAGATATTATCCACCCTACTCAGGACTTCGGTGGCCTTGATGTGCTTACTATATCACTTGGAGGAATTCCACCCAATCA chr4 - 94230402 40185971 40185970 40186371 54044032 54044031 54044432 401 TTTGGGGAAAAATACATCCATACATTTCACTACAACCAAAGCCATGTGTTGCTGTAGCTGT-----ACTGG--AGAAGCATAATGTTGGTTATGTGTATGTGGGAGCAAAAAGTTGAGTCTGTAACTGCCATTTTAAAATTATGCATTTTGCTTTTTTCTTCTGATCAGATAAGAGCTGGGAAAGTGCACTACATATCTGATGCTGGAATTGCTGGGAAAGTGGAAAGAAACATCCCAGAAGTGTACACAGCAGATGGACAGTGGCATTCTGTACGCATTGAGAAGAACGGCTCTACCACTGTCCTGTCTGTTGACAAGACTCATAAACGAGACATTCTCCATGTCACACAAGATTTTGGTGGACTAAACGTTCTTACAATATCTTTGGGAGGTATCCCACCAAACCA ..x.:.:x...:.:::.xx:..:...::.x........:.x:.x.xx.:.::.x..x...:-----.....--.:..::x...xx..:...x...xx...-----------.x..xx:.:.:x:xx.:....x..xx....::::.:.x.x:..xx.x:x.:.x.-.....x.:::x...x.....::.:.x:.:...:.....x....................:.....:..:..x.....:..:::x.....:..x..x.....:x..x.x.xx....:...:..:..xx.x:.x..x..x:............::.:x:....xx....:...x....:x::..x..:..:..:.....x..x:.:..x.....x.....x:.x.....x..:.....x..:.. 61M5D5M2D27M11I54M1I242M 250/389 64.3% 401/94230402 0.0% 19/389 4.9% 85301217 NA +133276 chr4 + 190214555 125489847 125489846 125492977 3131 CTTTTTTTTTTTTTTTTTTTTTGTAAAAAGCC-----TTACTCCTTCTTCTTCTCCCAGCAGGTTTTGATGGCTGCATTGCTTCTATGTGGTATGGTGGAGAAAGTCTTCCTTTCAGCGGGAAGCATAGCTTGGCCTCCATCTCAAAAACAGATCCCTCAGTGAAGATTGGCTGCCGTGGCCCGAACATTTGTGCCAGCAACCCCTGCTGGGGTGATTTGCTGTGCATTAATCAGTGGTATGCCTACAGGTGTGTCCCTCCTGGGGACTGTGCCTCCCACCCGTGCCAGAATGGTGGCAGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTGTGAGATGGTGGTGGCCTGTCTTGGCGTCCTCTGTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTGCGG--GGCATGTCTGTGTTCTGAGTCAGGGCCCTGAAGAGATCTCTCTGCCTTTGTGGGCTGTGCCTGCCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTCCTGGTCCTTAGCCTGATCCTGTGTAACCAGTGCAGGGGGAAGAAGGCCAAAAATCCCAAAG-AGGAGAAGAAACCGAAGGAGAAGAAGAAAAAGGGAAGTGAGAACGTTGCTTTTGATGACCCTGACAATATCCCTCCCTATGGGGATGACATGACTGTGAGGAAGCAGCCTGAAGGGAACCCAAAACCAGATATCATTGAAAGGGAAAACCCCTACCTTATCTATGATGAAACTGATATTCCTCACAACTCAGAAACCATCCCCAGCGCCCCTTTGGCATCTCCAGAGCAGGAGATAGAGCACTATGACATTGACAACGCCAGCAGCATCGCCCCTTCGGATGCAGACATCATTCAACACTACAAGCAGTTCCGCAGCCACACACCAAAATTTTCAATCCAGAGGCACAGTCCCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTTTGAGAACCAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAAATCTTCTACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGATGGTAATACTTTGGAAATGCATGGTGACACCTGCCAACCTGGCATTTTCAACTATGCCACAAGGCTGGGAAGGAGAAGCAAGAGTCCTCAGGCCATGGCATCACATGGTTCTAGACCAGGGAGTCGCCTAAAGCAGCCGATTGGGCAGATTCCACTGGAATCTTCTCCTCCAGTCGGACTTTCTATTGAAGAAGTGGAGAGGCTCAACACACCTCGCCCTAGAAACCCAAGTATCTGCAGTGCAGACCATGGGAGGTCTTCTTCAGAGGAGGACTGCAGAAGGCCACTGTCTAGAACAAGGAATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCTTCTGATAGTGACTCCCATGAATCTTTCACTTGCTCAGAAATGGAATATGACAGGGAGAAGCCAATGGTATATACTTCCAGAATGCCCAAATTATCTCAAGTCAATGAATCTGATGCAGATGATGAAGATAATTATGGAGCCAGACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCGAGGGAGGACCTGTGGGCACCCAGGCAGCAGCACCAGGCACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCCCTGGCTTTGGCCATTATGTAGATGTTTTTAAAGATTTGGCATCTCTTCCAGAAAA------------------AGCAGCAGCAAATGAAGAAGGCAAAGCTGGGACAACTAAACCAGTCCCCAAAGATGGGGAAGCAGAACAGTATGTGTGAAGTTTATGTACTGGCACTA-TAAAATATAAAAACAAGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCA-CATTTGAAAAACAGGCCAGTATGGACTAGTGGTGGAGGGAAAACTTTAAAAATAATAACCACAATGCTGCTGAAACAGACTCACAACAACTCTTAATTTAAACATGTGTGGTTGAATTTATTTC-CCTGCATGCATTGTGTTTTGTAACTAGTTATGTGGCATGCAGCATTTGGAAAATTTTTCTTATTTACCAGTGTTTGATTTGTGATTTTTAAA-AATTGATACCTTTACCATTGCAGAAAAGAAC----TTGTGCTTTCCCAGTGGCGTATGTGTATTGTTTCAACTGTATT--ATTATAATTATATTTTGCATTGCAAGATTCTTGATGTTAAACCAATCCTTGTAAAGTGTAAAAAGGAACCCTCCTATCGTGGAATGAAAGATTAAGTATATTAACACTTTTCAGAATG-ATAGTTTCTGTAT-TTGATGTTGCTCAGAAAT--------------------GTCTCAGTATTTGA-------------GTAAGTT---TTACATGACAGTGGGTACTGAAATTAAGTCATTTTGTTCAGCACTTTAA-------------------------------------------CGCTTTCTT--------------------------------------ATAGAATTGTCTTAAAACTTCTGGATCCTTG------------------------------------------------------------------------------AGCAAATGATTATA-------GTCTCCTGACTT---------------------------------------------------------------------------------------------------TCATGAGGCTTCCATTAGGAACA-----------------GAATGATT------------------------GCAT-------GTTGTCCCCAGAACACTGCC---ACCTTGCTATGC--GAATGATGTTCTCAGCAGCA------CTTCTAAGA--AACACTCTTAAAAGTTATTTATTG----AAAATTTTTCGTATGCTTTTAATATTTTAAAGAATTGACCTAAGGAAAGCTTATGATTGGACTTATTTTCCAACCAGATAACATTTACTCTAAGTACCCAGTTTTTATAA--TTTATATGAAATCAGATTTCAACACTTACTT-TGTCATTTTGTAGATC--ATTTTTTTAAAATACTGTGTAAAAAC-------TTTTTTTACACCTAAGCTGTGTTTTTGATACTGATATTTTCCTATGCTGAATAGTTTTCTTACTTTCAGGGAAGGTAAG-AAAATACTTTTTTTATATTTGTTACTTATGTAACATTCATATTTTTCTCATTTTGAT--ATTTGTAACATACTGTATGCTTTCTACTTGTAAATGTCAACAATAGAATTAAAATATTTATTTAAAATATTTTGT----ATTCATAGTGTAATATTAATTTTTATCTTTCTATACTCT chr4 - 94230402 40189836 40189835 40193331 54037072 54037071 54040567 3496 CTTTTACTTAACCTTGTTCTGCTTAGAAATCCCAAAGTGACTGCTGCTTTCTCTCTTAG---GATTTGACGGCTGCATTTCCTACATCAAGTATGGTGGGGAGAGCCTCCCCTTCGCTGGCAAGCACAGCCTGGCCACCCTTTCCAAAACAGACCCCTCAGTCAAGATGGGCTGCCGTGGCCCCAACGTCTGTGCCAGCAGTCCCTGCTGGGGTGAGCTGATGTGCATCAACCAGTGGTACACCTACCAGTGTGTCCCACCAGGTGCTTGTGCCTCCAGCCCCTGTCAAAATGGTGGCAGCTGCGAGCCTGGGCCACAGGCCAGCTTCACCTGCAGCTGCCCTGAGTCGTACGTGGGACAGAGGTGTGAGATAGTGGTGGCATGTCTGGGGGTCTCCTGTGGCCCTGGTCACGTCTGCAGAGCGGGC--CCCAGCAGCAGCTATGTGTGCCTGCCATCCCCACACCCTGCTGAGTTGTCTCTGCCCCTCTGGGCTGTGCCGGCAATTGTGGGCGGTTGTGCAACAGTGCTGGCACTGCTGGTCCTCAGCCTCATTCTCTGCAACCAGTGCCGGGGGAAGAAG-TCAAAGGCCCCAaagcaggagaagaaaacaaaggagaagaagaagaaaggaagTGAGAATGTGGCGTTTGATGACCCTGACAACATCCCACCTTATGGTGATGACATGACAGTCAGGAAGCAGCCTGAGGGGAACCCCAAACCTGATATCATAGAAAGAGAAAACCCCTATCTCATCTATGATGAGACTGACATCCCACATGCCACGGAGACCATTCCCAGTGCCCCACTGGCTTCACCTGAGCCCGAGATCGAGCACTATGACATTGACAACGCCAGCAGCATTGCCCCCTCGGATGCCGACATCATCCAGCACTACAAGCAGTTTCGGAGCCACACACCCAAGTTTTCCATCCAGAGGCACAGCCCACTGGGCTTTGCCCGGCAGTCTCCCATGCCTCTGGGAGCCAGCAGCCTGACGTACCAGCCTTCTTATGGGCAGGGCTTGAGGACAACATCTTTAAGCCACTCAGCCTGCCCTACTCCTAACCCCTTGTCTCGGCATAGCCCTGCACCTTTCTCCAAGTCATCGACTTTCTACAGGCACAGTCCAGCCCGGGAGCTGCACCTCTCCATACGGGAAGGGAGCCCACTGGAGATGCACAATGATGTCTGCCAGCCCGGCATTTTCAACTATGCCACTCGGCTGGGGAGGAGAAGTAAGAGTCCACAGACCATGGCAAGCCATGGTTCCCGGCCGGGCAGCCGCCTGAAGCAGCCCATCGGTCAAATTCCACTGGAGACGGCTCCTCCAGTGGGGCTGTCTATTGAAGAGGTGGAGAGACTGAACACCCCGCGCCCCAGAAACCCCAGCATCTGTAGTGCTGACCATGGCCGGTCCTCTTCTGAGGAGGACTGCAGAAGGCCCCTGTCCCGGACAAGGAACCCGGCTGATGGCATTCCTGCACCCGAGTCCTCCTCCGACAGTGACTCCCACGAGTCCTTCACATGCTCAGAGATGGAGTACGACAGGGATAAGCCCATTGCGTACACCTCCAGGATGCCCAAATTATCCCAGGTCAATGAGTCTGATGCGGATGATGAGGACAACTATGGGGTGAGGCTGAAGCCCCGGCGGTACCCTGGCCGTCGTGGGGAGGGTGGGCCCGTGGGAGCACAGGCGG------CTGGCACTGGGGAGAGCTCCCTGCCCGTGAAGCTGGGGCAGCAGGCAGGAAGCTTCAACTGGGACAACCTCTTGAACTGGGGCCCAGGCTTCGGGCATTATGTGGATGTTTTCAAGGATTTGGCATCACTTCCTGAAAAAAcaacagcagcagcagcagcagcagcaAGTGAAGACAACAAAAGTGGTACAACAAAGCCTGTTTCCAAGGAGGGGGAAGCAGAACAGTACGTATAGGCTTTGTCT-CTGGCGTTGCCGCAGTGCAAGGCCATGGAACGG---TCAGACTGTTGTGTGGTTGTAGAGAAGGAAAGGTCAGCATTCGCACCCCAGGCCAGTTTG-------GTTGGAGG--AGACTTTAAAAATAATAACCATTATGCTGCTGAAAGAGACTTAAAAC-ATTTTTAATTTAATTATGCTTGGATGAATTTATTTCTCCTGCATGCATTGTATTTGGAAACAAGATATTTGGCATGCAGTTTTTGAAAAGGGTTTCCTATTTACCATTGTTTGGTTTGTGATTCTTAAATTAATAATGCTTT----GTTCTGAAAATGAACTAATTTGTTTTTTAATTGTGAAGGATGTGTAT-------ATTGTACCCAGCTACTAATGTGTTTTACGATGCAAAAGTATTGAGGATTTAATTTTCCTTAAGAAGTGCATGGAAGAAGGAT------GATGAATGAAGGAATTACAGTAGCAAGTTGTCTCAGAAAATGTAGTCGCTATATCCTGCAGTTGCTCAAACATAAAGATTATGGAAGAAATCAGCTTGAGTAATTGCTGGCAACAGTGCTGTAAGTCGTATTCCAT-ACAAGAGGTGCTAGAAGCAGCTCAAGCTGGTCAGCACTTTAGGAGTTGTTTTCAGCTTGTTAATTTGTTTGTTTGGGGGCTTTTCTGTCTTCTTTTGGGGAtttttttttttttttttttttttttttttGGACAAAGTTGTGTGAGAGCTTCTGAATCTCTATGATGTATTTGGGGATGCTAAACCCTGGTCCCTGCCTGGCCCCTCAGTGCTTCCGGTGGGAGGGGAGTGCTCGGCATCAGGAAAAAACTCCATTTCCACATCTCTTGGCCTTGCATCTTGGCTGTGCAGCTGCTGCAGCCTGCGTTTCTCCCCATCTTTCATTTTCCATCTGTTCTATGGAAAGGTAGTAATAACACTTGCTCACCTACCTCACGGGGGTGTTGTGAGGACTAATTAGTTAACTCATCTGAAGTGCTTAGACATTATAAAGCACTATAATAAGCATTATCATAATTATTATTAAAGCACTGCCTAGCCTTTGTGACCCTGGGGTGGCATTTTCTGCATTATATGATTTTCTATGATGAAAACTTTGAAGAATTATTTATTGTATAGAAAATTACTGCA---CTCTAGCATTTTGAAG--CGGATATGAGGGAAAACTACTTGTAGACTCATT-------AAAATAGC--TTACTGTTTGTCCCAAATTCCCTAAAGTTTTATGTTAAGTAGAACTTCACAAAGTCCTTACGTCTTCATGCAAATCTGATGAACCTATCGTACTGTGTAAAAACCTTCAATTTTTTTTTTTCCTAAGCTGTGTTTTTTATATCAATATTTTCCTATGCTGAATAATTTTCTTACTTTCAGGGAAGGTAAGAAAAATACCTTTTTTACATTTGTTACTTATGTAACATCCATATTTTTCACATTTTGATAAAATTGTAACATACTGTATGCTTTCTACCTGTAAATGCCaataatagaattaaaatatttatttaaaatCTTTAGTGGGCATTATTGGAGTTGTTTCATCTTTTCTCTCTCTATCTTTT .....x:..xx::..x..:.x:x..:...x..-----.x...x..x...::....::..---.x.....:.........x.:.x:..xx:.........:..:..:..:..:...:x:..x.....:...:.....x..x.:..x........:........x.....x..............x...:.:..........::..............x:..x.......:..:........::.....x:.........x..x..x.x:.........x:...x..:..:..............:.....x..x.::..xx..:..........:........x..x...:..::....x:..xx........:........x.....x..x...::....xx:.xx..xx.x..x....:...x..x--:..x..:.--.x:....x..:x.x.::xx:.x:x:.....xx...x.x........::.x...........x..x..:......:.:..:.....x..x:....x..x........:.....x..:..x..:.........x...........-:....:::.......-...........x.:..............:..:...........:..x..x.................:.....x..:.....x...........x..x..............:........x.....x........x.....:...........:..:...........:.....:..:..x..::x.x.:..:.....:.....:.....x:....x..x..x....xx.....x................................:.....:........x........:..:..............:..x...........x..:.....x..............:..x..:........xx....:..:........::.:.....x.....::....x...........x.....x..:..:.....:..x.xx..::.............x.....x.....:.....::.......:..:..:..x..x...........:..x..x..x.....:..:x....:.....xx....::....:..::.:...x....x..x.::x.x:....:.....:::...:::......:..:....................xx.......:........:........x...:........xxx........:x.:..:..x..:.....:........x..:..x..:...........:x.xx..........x..:..x...........:........:..x.....x..x.....:........x..:.....:.....x........xx....:.....x....................x.....:x.:........:..:..x...........x..x..x..:.....:..:..:...........:..:..:.....x........:.....:..:........x.....x..x.::..:..:.....:..............:..:........:........:........:..:..:.....:.:x..:........:..:x......x:..:..:x.x.xx.....x..:..:.....x:.x.....:.------.x.......xx..x.:.x.x......:.......:........:.....:.x:.................:..............x.....:..x........:........:..:...........x.....x.....------------------...........:......x::....:x...x.....x..:..x..::....:..x.................:..:.:::x...:.x.-.....::.:-::x.:.::..::x..x.:..:::---...:..::....:x:....:x..xx...xx:.....-....:.x.xxx.........x..-------.x......--.:...................:x............x.....:.x...-.:.:.........x:...:x...x............-..............:...x.x...x..x...x..........:x....:...:xx....:.........x......:.........:.....-x.x.:..:.:..----:..x:::...x....----....x:...xx:x...:x.x........-------.:....::--::..:x.x.:.:....:.:x.....:.x.x....x.x.xx.x:xx.....:x:.....:.x::.:...xxx.------.xx.......:..x.x.xx:..x:..xx:x.:......x:-:....:x..:...-:..xx........:.x..--------------------.::.x....x...x-------------......:---..x...-...:x:...:..::..x:.:x...xx:..x...........:-------------------------------------------:.::.....--------------------------------------.:.:.:....x.x.:.:......:...::.:------------------------------------------------------------------------------..x...x:.:.x:.-------:....:..:.:.---------------------------------------------------------------------------------------------------...:.:..x.x:::.x....x:.-----------------:.:..x..------------------------....-------:..:.:x::.:.:.......---x.:...:x.:x.--.::..:::..:..x...x:.------:.....x..--..x...:.x..:.:..........----:...x..x::.:.---:.:..::.....:...--:x..:x.:...:..:x:..:xxx.:....:...-------x.:...:.--.....x.xx..x..x.:..:::xx..--.....:.x..:.x::.:....xx.xx.x...-:...x.:x..:.:...--..xxx::..xx:..............-------.......x:x................x...:::....................:.........................-.......:.......:....................:..........x.........--.x.........................:........:...:...........................x...x..----...xx.:.x..x:.x.:.x:....x...:.....x:.:. 32M5I22M3D365M2D8M2I143M1D15M1I1107M6D139M18I88M1D9M1I23M3D36M1I23M7D8M2D47M1D36M1I92M1I12M4D15M4I28M7D8M2I72M6D40M1I13M1I18M20I14M13I7M3I6M1D42M43I9M38I31M78I14M7I12M99I23M17I8M24I4M7I20M3I12M2I20M6I9M2I24M4I13M3D16M2D33M7D8M2D26M2I31M1I16M2I26M7I79M1I57M2I75M4I39M 2325/3073 75.7% 3496/94230402 0.0% 481/3073 15.7% 85300011 NA +3240 chr4 + 190214555 125522544 125522543 125522596 53 TTCTGTAATAAACCCAAAATAGTAAAAACAAACAAACAAACAAACAAACAAAA chr4 - 94230402 68812199 68812198 68812251 25418152 25418151 25418204 53 TCCTATGGGAAAACCAAAATGCTAAAAAAAAACAAACAAACAAACAAAAAAAA .:..:.::x...x.......:x......x...................x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 56710345 NA +3100 chr4 + 190214555 125550158 125550157 125550286 129 AAGAAAAGG--AAGTATTGGTTAGAATTTGTATATTAAGTTCAAGTAAATAGCAATAATAGGGATAAGAGTTAAGGAATAACATATATATATATATATATATATATATATATATATATATATATACACACA chr4 - 94230402 45271601 45271600 45271728 48958675 48958674 48958802 128 AATAAAAGGTCAAGGAATCCTTATAATTT-TATGAAAAATACTAACCAAT--CATCATGAGGAGAAAGATTGGAAAAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x......--...x.x.xx...x.....-...:xx..:.x.x.::x...--..x:.xx...::x....x.x:.::...x..xx.:x.x:....x........:.:.:........:....:.x....... 9M2I18M1D20M2D79M 85/126 67.5% 128/94230402 0.0% 5/126 4.0% 80278557 NA +3135 chr4 + 190214555 125550236 125550235 125550300 65 ACATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATATA chr4 - 94230402 8395796 8395795 8395860 85834543 85834542 85834607 65 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .::.:.::...x.:..:...x..:....:...::x..:..xx...................x.:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 117154440 73060115 +3033 chr4 + 190214555 125560684 125560683 125560771 88 TCCTCCCTCCTTTCTTTCCTTTCTTCCTCCCTCACTCCTTTCCTTTCTCCCTTCCTATCTTCCTTCTTTCCCTTTTTCCTTTTTCTTT chr4 - 94230402 79653014 79653013 79653101 14577302 14577301 14577389 88 TCATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTT ..x..:.x.......:x..::.::..::.:x:.xx::.....xx...:..x..:..x.......::...x:.::.:..x.:..:.... 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% 45907670 NA +3072 chr4 + 190214555 125586797 125586796 125586834 38 AATCTCTCTCTCTCACTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929910 18929909 18929947 75300456 75300455 75300493 38 AATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...:..........x......:................ 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 106656887 83557668 +3112 chr4 + 190214555 125586801 125586800 125586837 37 TCTCTCTCTCACTCTCTCTTTTTTTTTTTTTTTTTTG chr4 - 94230402 18929912 18929911 18929948 75300455 75300454 75300491 37 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG .:........x.......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 106656889 83557666 +7744 chr4 + 190214555 125620145 125620144 125620405 261 TTTTCTATTTGTAAAGATATTTGATAGTCGTTTCTGTTAAGAATTATCCCAGTTTTCATTAGTGAGTTTTGCAGCTGCTT-GGAGTTCCTGGCAGGCAACACTGTTTAAGACTGGGTAAGTCTAAAATGTTTTCCCTAAAGTTTCGGTTCATATTGAAAACAGACACACACTCTTGAATGTTTAAAACAGAATTGTTTCTGGCCAGATTTTCAGTGTCAACACAAAATACTGCAGAAGAAGTTACATTTTAGTTTTCATTTT chr4 - 94230402 40236504 40236503 40236754 53993649 53993648 53993899 251 TCTACAATTTGGGCAGATATTTGATTTCAAATTTTATGAAGCATTGCCTCCATTTGCATTAGTAAATTCTGCAGCTGCTCCTGAATTTTTGCCAG----TACTACC-AGACCTCAGTAAATGCAGAGGATTTTCCCTAAAGCTTCTGTTCATATTGAAAATAGTCTTGCACTC-TGAATATTTCAGTGAGAACAGTTTCTGGTAAAA-ATGCAGTTTCAACTTAAAG---TGGAGAAGTAATTAT-TTTCAGCTATCATTTT .:.x.x.....x:x...........xx:x:x..:.:.x...x...::.:.x:...x.......:.:..:..........:-x..:..::..x...----:...:::-.::x..x:....:.x:.:.:x:............:...x..............:..x.x::.....-.....:...x.:xx....:x........:x.:.-x.x....x.....x:...:---..x.....x.:...:-...:..:.x....... 80M1I14M4D7M1D66M1D33M1D19M3D15M1D16M 173/250 69.2% 251/94230402 0.0% 12/250 4.8% 85383641 NA +3081 chr4 + 190214555 125634202 125634201 125634283 82 ATACACATGTATATATACACACATATTTATATACATATATATACACACATATATATACACACACATATATATATACACACTT chr4 - 94230402 24136193 24136192 24136266 70094137 70094136 70094210 74 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAAC--------AAACAAACACACATATTTACACCCTT ..:::...:.....x..::x.xx.:..............:.....x..--------.x...x...:.:....x.....x... 48M8D26M 55/74 74.3% 74/94230402 0.0% 8/74 10.8% 101498009 88716546 +10190 chr4 + 190214555 125641251 125641250 125641754 504 TTGTGAGTCAATCTGTGTTCTATACTGAGTGTTACTTGTTTTATTATGTGTGACCTGATCAGAGGCACAA-TAATTTGTGGCACCTCAGTCATGTGCAATAACCATTTCACATCAAAAAGCAAACAACCAATCTGACTTTTACTATTACACGGTTCATATGAAATGTGGTTA---CTTAGACCTGAAGCAGCAAGCAAGCATGAAATGCAATATTATTTAACATTAGATGTAAAACTTATTTGAGGGAGAAAAAGAAAAAGAAAATTTTAATAGAAGAGATAGTGAAAATTGCTAGAAAGAAAAATCCTGGAAGAAATAAAGCCTCTGACAAGCTGAATTGTTGAAGGCTTAGGTCCTGCTGATGATTGCCTG-TGATCCTGGTACATGCAATTGAGCAAATAGT-AATTAATAAACTAAAGAGAATAACTCTTCTGATCATTCAGTTTTCTTC-----AAAAAAGGTGGG--GAAGCTTTGATGTGAGAGAATCTCTTTTATTAGGAGGGAGTCTT chr4 - 94230402 40250008 40250007 40250477 53979926 53979925 53980395 470 TTTTTAATCGGTTTGTAGGCAGAAGTGTGTGTTAGTTGTTTTATGATGTGTGATCTGATCACAGGTACAAACAGTTTATGGCACTGCAGTCCAACATTGGAACCACCCAACATCAAAA-GCAAACAACCTCTCTGACCCATACAGCTACACTGCTCAAAAGAAAC-TGTTTAGTTCCTGGACATGAAGGAGCAAGTAGGCATGAAATGCCATACTGTTTGATAATGAATTTCAAACCTTTCACAGGCAG--------------------AATACAAGAGA-----AAAATTAC------------CTCTGAGCAGCCTGAAATCACTGGCTGACT--ACTGCTGACATCT---GTCCTTTCAGTGAAGCTCTGAAAATCCTGGCATATAAGGTTTAGTACAGAATAAATTACTAAACCAAACATAATAATTTTGTATCTCAATCCAGTTTCTTCATATTAAAAGGAGTGAGCAGAAACTTTAGCATT---GCAACTGTTTTCTGAAGAGAGCGCATT ..x.x.:..::.:...:xx.x:x.x..x......x.........x........:.......x...:....-:.:...:......:x.....xx::::x:x.....:::x.........-..........xx......::x...x::.....x.:...x.x....:-..x...---.:.:...x.....x......:.:...........x...:.:...:.:.x.::..x.x....:.x.:xx...x..--------------------....x......-----......:.------------::...::x::xx.:..::.x...:.x::..--.:..:...x:x..---.....x::::...xxx:...-x:.......:.:..:x::..x..:.x.x.:.-.....x.....:...x.x.....:.:.x:xxx...x..x:x.......-----....:::...:.--...:....::::.x---.x.x..x....x.x.:...:.x.:x.. 70M1I47M1D46M1D6M3I74M20D11M5D8M12D30M2D13M3D20M1I31M1I48M5I12M2I14M3D27M 303/457 66.3% 470/94230402 0.0% 60/457 13.1% 85391243 NA +6534 chr4 + 190214555 125658992 125658991 125659266 275 ACTGCCACAGATATGAA-TGATACATTGGC-------ATTCACCTCTCTCTAGTGTTTGGGTTTCTTTTCCTACTTATGTATTTTCCATGTAGCTCAGCTGCCAAGTCTGACACCTAAAGGGTCAATCCCTCACTATACATAGTTTAAGTAAAATTCCACATTTACCTCCAAACTGATGCCTATACCAAGGGATTTCCAA--CCATTTGGAAAAAAAAAAAAAAAAAAAGCTATAGGGTAGACATATCATTTGGTACTGTCTCACTTACAAATTACTCATGCAGG chr4 - 94230402 40258457 40258456 40258726 53971677 53971676 53971946 270 ACTGACAAAGGTGTTAACTGATTGATTGGCGCAGCAGAGTAACTTCTATTTCATCCATG----TCCTCCACCAGCTCTACATTTTCCATGCAGCCAGGCTGCCAATTCTCACACCTAACGGGTGAGCCCTTTATTTCGTCTTGCTCGAGCAAAATTCCATTGGCATTTCCAAACTGATGCGTGCACCCAGGTATTTCCTAGCTCACTAGACAAGGGACTGGAAGGTGAAG----GAGGTCCACA-------TGGCACAGGCTCACTTACCAATTATTCTTGGAGG ....x..x..:.:.x..-....xx......-------.x.x..:...x.:.x:.x:x..----..:.::x.:.x:.x.::..........:...:x:........x...x........x....x.::..:.:.:.x:::x.x.:.::..:.........:xxx:.::.............x.::...x...x......x.--:..:.x.:x..:::.xx::..::x:...----::...xx...-------...:..x.x.........x.....:..x..x... 17M1I12M7I22M4D137M2I28M4D10M7D34M 170/260 65.4% 270/94230402 0.0% 25/260 9.6% 85400535 NA +5690 chr4 + 190214555 125666472 125666471 125666679 208 AAGGTTGAGTATTTTAGCCAGGAGGATACACACACAA--AAATGTGTTCTTTCCTTGATACGT--ATCCT-CCAGAGCCCAGCAGGCATCAGGAAAAG-GACTCCAGGGAACATTGCTGAAAGGACTGAATTGGCTTAAGAGGCAGACAACCAAACCTAGCTAGGGAGTTTTGGGCTACATCTCAGA----CAGTTTATTAAAAAAGCAAAGGGGATA chr4 - 94230402 40262897 40262896 40263113 53967290 53967289 53967506 217 AAGCTAAAGTATTTT-GCCAGGAACATAAGAACTTCAGCAAACTTTTTCTTTCTTTCTTTCAGTGATCCTGCCTGGATCAAGCAGGCAACACTAGAGGAGTCTTGAGCTCACACTGCTGGAAGGACTTAATTGCCCTAGGGGACATAAAACAGAATCCAGCTACAAAGTTTTGGTCTCCATCCCAGATACTTAGTCTATTAAATGAGTCAGGAGGTTA ...x.x:........-.......:x...x:x..x:x.--...:x.x.......:..xx.x.:x--.....-..x.:::.x........x..xx.:.:.-.x..:x..xxx...:.....:.......x.....x.:..:.:.:..x.x...x:..:.:.....x::........x..x....:....----:...:.......x:..:x.:.:..x.. 15M1D21M2I24M2I5M1I27M1I88M4I27M 142/207 68.6% 217/94230402 0.0% 11/207 5.3% 85403575 NA +13504 chr4 + 190214555 125689791 125689790 125690178 388 GAAATCTAATCTTTAATGATTAAACAAAACTTTTATAATTCAGGCCTGTAGATATTTCTTT-------CATTAGTGAAATCCTTTGAATGCCCTAAATAATTGAGTGTTCAGAAGCCAGCCACTCAAACTGAAGTTAGAAGTGTTGTTTGTACAGGTGGTTTGCCTACTGGGAGTCTAAATTCTTA--CTGTTGTCCATATCAATTATTCTGAGACTATGTCTGTTTAGTGTCTGCCAGTTTTTATAACAACAGAAGACTCTATTCAAAAACTGCTGACATGACATTTATCAAATTATCC---TAAGAGTGA-------------CATTCTGTTTCT----AAATAAAAGAACCATGAGTGAA--AGTAAATGCTTGGATGGTTAAATATTAAGTCACAGAAATAAATTTCTCAGATTT chr4 - 94230402 40274095 40274094 40274501 53955902 53955901 53956308 407 GACAACTGAGCTATGCTGATAAAACTA--CCTTTCAAACACAGACATGGATATTTTTATTTATTTTTCCACCAGTGAAATCTCTGGAAAGCCCTAAATAATTGACTGTTCTGGAGCCAGCAACTGAAATAGAAGTTGGAAATGCTGTTTGCACAGGTGGCTGGCCTACTGGGAGACTAAATGCTTACCCTGTTGCCCATATCAATTATTCTGAGAC----TCTGTTCCATGT----CAGTTTTGATAACAAGAGA--ATTCTTTTAGAAAACTGCTGATGCAGCATTTATCATGCTATCTTTATGAGACCGattttatttcattttattttattttTGCAAGGATATAGCAAACAAAGGTACAGGAGGAGTTATCAGGATAGTGAAGTAACAAGCCAATTAAACAACTGCCTCAAATTT ..x.x..:.x..x.:x....x....x.--.:...xx..:x...:.x..x.x..x...x...-------..::.........::.x...x...............x.....x.:.......x...x...:x......:...:..:......:........:.x............x......x....--......:.....................----......:x:...----.......x.......x...--.:...x..x:...........:::::.........x::....:---.:...x:..-------------:...:.:...:.----::...x.:x..x..x::..:x.--..x.:x.:::x....:..x..:..x:...:..xxx...:..x.x:....:.... 27M2D32M7I118M2I28M4D12M4D19M2D43M3I9M13I12M4I22M2I54M 277/376 73.7% 407/94230402 0.0% 43/376 11.4% 85415696 NA +3093 chr4 + 190214555 125704732 125704731 125704790 59 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATGAGACATTTT chr4 - 94230402 69437739 69437738 69437794 24792609 24792608 24792664 56 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT---TACATAAGTAATTCT .........x........:x...................x.---..:..:..xx...:. 41M3D15M 47/56 83.9% 56/94230402 0.0% 3/56 5.4% 56266993 NA +3340 chr4 + 190214555 125713168 125713167 125713262 95 ACTGGTATTCTTAAGAATGCATACATACATTTGTATA-------------------TATGTATGTATATACACACACATATATATACACATACACATACATTTATACACACACA chr4 - 94230402 14964771 14964770 14964883 79265520 79265519 79265632 113 ATTTGTACACTCAAAAAGGCA-AAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.x...:x..:..:..x...-.x:.:.....:....-------------------.....x..::.:.:.....:::...:....:...xx....:....x:.:......... 21M1D15M19I58M 67/94 71.3% 113/94230402 0.0% 20/94 21.3% 110748397 79466158 +3083 chr4 + 190214555 125714160 125714159 125714248 89 AAAATAAATTTCTTTCTCTCTCTCTCTGTCTCTCTCTCTCTCCAAACACACACACACATGTGCGCGCACACACACACACACACACCCAT chr4 - 94230402 6809811 6809810 6809899 87420504 87420503 87420592 89 AAATTAAATTGCTTACAACATTTTTTTTGCAGTCTCTCTCTCTCAGCGCACACTCTTTCGCACACACATATACACACACACATAACTAT ...x......x...x.xx:x.:.:.:.xx.xx..........:x.:.:.....x.x:x:.::.:.:..:.:...........:.x.:.. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 118904349 71310206 +3328 chr4 + 190214555 125719416 125719415 125719489 74 TCTATAATAT--ATATATAGCTATATAACTATATATATATACACACACATATATATACACACACATATATATACAC chr4 - 94230402 24136187 24136186 24136262 70094141 70094140 70094216 76 TCTAGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ....x...:.--.......x:...:x....:.x......:.:.:...:.:.x.:.x...x.....:....x..... 10M2I64M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% 101583229 88631326 +3903 chr4 + 190214555 125719435 125719434 125719536 102 TATATAACTATATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATA chr4 - 94230402 73121108 73121107 73121209 21109194 21109193 21109295 102 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .::...x::...:.:.........x.x::..:x:....:..::...x:..:..:x::....:.:x::.:.....x.:..:.x....x.x........:.... 102M 65/102 63.7% 102/94230402 0.0% 0/102 0.0% 52598327 NA +3324 chr4 + 190214555 125719436 125719435 125719534 99 ATATAACTATATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATA chr4 - 94230402 73121111 73121110 73121209 21109194 21109193 21109292 99 ATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ....xxx..:.:.....:...x.x:...:x:..:.:..::.:.x:..:.::x::.:..:.:x::.......x....:.x....x.x.......::.... 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 52598325 NA +3166 chr4 + 190214555 125719443 125719442 125719536 94 TATATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACA------TATGTATGCCTACATTAATACACA--------CACACACACACAGACACAAATGAATA .:.:...:.:.:..:.x....:...x....------...:...:.x:....xx.......--------............x.....x..:x... 30M6D24M8D26M 61/80 76.2% 80/94230402 0.0% 14/80 17.5% 117323652 72890903 +3013 chr4 + 190214555 125719446 125719445 125719506 61 ATATATATACACACACATATATATACACACACATATATATACACACATATATACACATATA chr4 - 94230402 66904847 66904846 66904907 27325496 27325495 27325556 61 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATA ......:...::.....:.:...:............x..x::x..x:.:......xx:... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 58814599 NA +3219 chr4 + 190214555 125719446 125719445 125719502 57 ATATATATACACACACATATATATACACACACATATATATACACACATATATACACA chr4 - 94230402 7596413 7596412 7596469 86633934 86633933 86633990 57 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA ...:.x..:..:...x..:...........:...:....:.x...:...:x...:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 118123033 72091522 +3756 chr4 + 190214555 125719455 125719454 125719538 84 CACACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::::...:.:.:..:.x....:...x....:.::...::x:....xx...:...............x.....x..:x... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 117323668 72890887 +3018 chr4 + 190214555 125719457 125719456 125719522 66 CACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACA chr4 - 94230402 66904846 66904845 66904911 27325492 27325491 27325557 66 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ..:.:..:..::............:.:.:.....:..x..x::x..x:.:......xx..:..:.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 58814611 NA +3625 chr4 + 190214555 125719457 125719456 125719540 84 CACACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACACACATATATATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..::::.:...:.:::..:.x.:..:...x:...:..:...:.x:.:..xx...................x...:.x..:x... 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 117323670 72890885 +3310 chr4 + 190214555 125719459 125719458 125719526 68 CACATATATATACACACACATATATATACACACATATATACACATATATATACACACACACACACACA chr4 - 94230402 7596412 7596411 7596479 86633924 86633923 86633991 68 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ..:.:.x..::.:...x.::......:....:...:......x.:.....:x:..:...:...:.x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 118123047 72091508 +3141 chr4 + 190214555 125719460 125719459 125719510 51 ACATATATATACACACACATATATATACACACATATATACACATATATATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ......:........x....:...::.........:....x..:.x..x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 97249093 92965462 +3055 chr4 + 190214555 125719500 125719499 125719562 63 ACATATATATACACACACACACACACACACATATATATATATATATATATATATATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x.....x.:.....:...::.:x..::x.:....x.:.:..::......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 108198751 82015804 +3073 chr4 + 190214555 125719501 125719500 125719567 67 CATATATATACACACACACACACACACACATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .......:...::.........:.......:.:....x..x:.x:.x:.:....:.xx:...:::.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 58814655 NA +3054 chr4 + 190214555 125719510 125719509 125719553 44 ACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372750 87372749 87372793 6857610 6857609 6857653 44 ACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...........x..........x....::...:..::....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 38346760 NA +3044 chr4 + 190214555 125719639 125719638 125719679 41 TATTTTATATGTGTGTATATATATATATATACACACACACA chr4 - 94230402 10898950 10898949 10898990 83331413 83331412 83331453 41 TATTTTATGTGTGTATATATATATACACATATACACACATA ........:.....:..........:.:...:.......:. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 114820689 75393866 +3039 chr4 + 190214555 125719642 125719641 125719692 51 TTTATATGTGTGTATATATATATATATACACACACACATATATATATTTGC chr4 - 94230402 64433214 64433213 64433264 29797139 29797138 29797189 51 TTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC ...x.x...............x..:.:.:......:....::...:.x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 61286428 NA +3087 chr4 + 190214555 125744104 125744103 125744177 74 AGGAAGAAAGGAAAAAAAGGGAGGGAGGGAGGGAAGTGGGGAGGGAGGAAGGAAGGGAGGCAAGTAGATACCCA chr4 - 94230402 37794326 37794325 37794395 56436008 56436007 56436077 70 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTG----GGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAAACCCA .....:...::..........:...:.x.:.x.----....:.:..::..::.....:..x::.x.:.x..... 33M4D37M 49/70 70.0% 70/94230402 0.0% 4/70 5.7% 87949778 NA +4423 chr4 + 190214555 125749484 125749483 125749647 164 TTCTTGCCTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTT-----TCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTT-----CTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTT chr4 - 94230402 45185583 45185582 45185751 49044652 49044651 49044820 169 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTT-----TCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x....::x:....::....:..xx...:xx...-----.:.x....x.......:..:...:.x.:....x:.......::..:.-----....:........x:..xx.x:.:..:x..x.:.x.....:.-----.::::xx...:.:x......::.....xx.:.:.. 35M5D47M5I42M5I35M 104/159 65.4% 169/94230402 0.0% 15/159 9.4% 80563901 NA +3301 chr4 + 190214555 125749495 125749494 125749596 102 TTTCTTTCTTTCTTTTCTTTCTTTCTTTC----------------------------TTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTTCTTTTTCCT chr4 - 94230402 24861535 24861534 24861664 69368739 69368738 69368868 130 TTTCTTTTAATCTGTTCTCTTTTGCTTTCGTTATGCCACTGGCCCTGGTACAAACCATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTT .......:xx...x....:.:..x.....----------------------------...:...:x.:.:.x:x.:x:...:.....:.:..:x:.x....::::.......:...:..:........:. 29M28I73M 69/102 67.6% 130/94230402 0.0% 28/102 27.5% 100887960 89326595 +3145 chr4 + 190214555 125749501 125749500 125749619 119 TCTTTCTTTTCTTTCTTTCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCTTTCTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTTCTTTT-----TCCTTCCTTCCTTTCTTTTTCTTTCTT chr4 - 94230402 40845016 40845015 40845139 53385264 53385263 53385387 124 TTTTTCTTTTGTTGTTTTTTTTCCCCCCTCACCTTTCTCTAGCACAGCCAGTTTTTCTTATCTTTTTCTTTCTTTTCTTTCTCAACTCCAGTTGAGATTATTTCTCCAGTTCTTCTCGTTTCCT .:........x..x:...:....:::...:x.:.:.:..:xx.x:xx.:xx...:.::.x.....:.:.......:.......xx:..:xx.-----.:x..:..:.xx.....:.:x....:. 92M5I27M 73/119 61.3% 124/94230402 0.0% 5/119 4.2% 84904485 NA +3583 chr4 + 190214555 125749555 125749554 125749638 84 CTTCTTTCTTTCTTTTTCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTT chr4 - 94230402 18988809 18988808 18988892 75241511 75241510 75241594 84 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCT ....x..x.::...x.x:...x........xx..:.x..::..:...:...:............x...x.xx...:.x:...:. 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 106760746 83453809 +3264 chr4 + 190214555 125749565 125749564 125749658 94 TCTTTTTCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTC chr4 - 94230402 93177147 93177146 93177240 1053163 1053162 1053256 94 TTTGTCTGTCTCCTTCCCATGTCTTTGCCCCTCTCCCCCTTCCTCTGGATTTCTATCTTTCTATCTCTCTTCTTTCCATGATCTCGTTCCCCTC .:.x.:.x.:.....:.:x.x.::..x::...::.::....:..:.xxx.....x......:x...:.........:x.xx.:..x....::.. 94M 59/94 62.8% 94/94230402 0.0% 0/94 0.0% 32572418 NA +3385 chr4 + 190214555 125749566 125749565 125749695 130 CTTTTTCTTTCCTTTCTCTTTTCTTTTTCCTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTTTCTTTCTTTTCT chr4 - 94230402 23468146 23468145 23468273 70762130 70762129 70762257 128 CTTTTTAATGCCTTTTTTTTTT--TTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ......xx.x.....:.:....--........:::.:.xx:x.xx.x:.x..:..:xx.:.x.:........x.:.:.xxxx...:.x.:x......x...:.:.x.....:...x..x:..:..:::.. 22M2D106M 80/128 62.5% 128/94230402 0.0% 2/128 1.6% 102281420 87933135 +3847 chr4 + 190214555 125749596 125749595 125749708 113 TTCCTTCCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCC chr4 - 94230402 35294578 35294577 35294682 58935721 58935720 58935825 105 TTCCTGCACAATTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTC--TTCATTTTTCCTTAGTCACTGT------TTTCTTCTCATTCC .....x.x:xx:..::.....:.::...x.x..x.........:....x.......x::..:...:...--...x.........xx.:x..x.------......:..x.... 69M2D22M6D14M 76/105 72.4% 105/94230402 0.0% 8/105 7.6% 90455018 NA +3227 chr4 + 190214555 125749608 125749607 125749680 73 TTTTTCTTTCTTTCTTTCCTTCTTTCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTCTTTTCTTTTTTCCTTT chr4 - 94230402 38776927 38776926 38776999 55453404 55453403 55453476 73 TTTTTTTAGCTTATTTCTCTTCCTTTTCCTTACTTATTTATCTTCCTTTTCCTCCTCTTTTCTGATTCTCTCT .....:.xx...x:..::....:..:.:...x...x.:.x....:.:....:.:.........xx..::..:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 86972681 NA +9744 chr4 + 190214555 125760441 125760440 125760792 352 GACAGAAATCCAGCAATAGCAG---------TGTTCTCACTCACATAAAGGCTGGAAGCCAGGCTGACCCCAAATGATTCTCACTGGAAAAGGATAGCTAC-TTGCAGTAGTAACTACTCATTGAGTTTAAAATGTTAAGCCTTACCCCTAGACATCTGCAATGATTGCACAT--ACAGAGCAGCTGGAGGAAACTGACTGAGGATGTCA------CTGATAACAGAGGGAAAGAAGGGTGGGCAGAAGGCATCAAGGGG--AACTAGGCTAATGCATAAGTGTATATGCCTACAACAAGCATTTCAGTATTACA--GCCATCATCTGCCCATTTAGTTTTTTTCTTTTATATTGCTA-----TTCTTAATTGTTCTCA chr4 - 94230402 40304516 40304515 40304884 53925519 53925518 53925887 369 GACAGCATTCCAGCACCAACAACGCTGTCATTGTTCTCTTTCCTAGAGAGACTGGAAGCAGTGGTGACCCCAAAGCTGTCCCTTTGGAAAAGGAAAACTACTTTGCAATAATAATTATTCCTGGAGTTCAAAAGACTAAGCCTTCCCCCGAAAGAAATAAAACGATTACAAATTCACACAACAGCTGGTTGAAGTTGAATGAAGATGTCAATTATGCAGATAAGGAAGAAAGAAATGGTCCCTCAAAATGCTTCAAAGGAACAACT------ACATATAAATGTGTTTGGATTTTGTAAAAAT---AGATCTACAGTGCAATGATCTGCCCAATTAATGTTTCTCTTTTGTA-TGCTACTCCTTTCTTAAACGCTTTCA .....x.x.......x:.:..:---------.......x:..x:.x.:..:........x:x.x..........xxxx..:.x:..........x.:....-.....:..:...:..:..x.x.....:....x::........x....x.:.x.xx.:x..:....:..x..--...x.:.......xx...::...x...:.......------.x.....x::..::.:.:.x..x:xxx..:..x..x....:..:--....------.:::....:...:.x..xx.x:x::..:x..---..xx:....--..x..x.........x...:.x...:......:..-.....-----.......x:.:.:... 22M9I70M1I71M2I35M6I44M2I4M6D31M3D9M2I35M1D5M5I16M 239/342 69.9% 369/94230402 0.0% 37/342 10.8% 85455925 NA +3330 chr4 + 190214555 125762302 125762301 125762363 62 AATTTCTCCTTCTTATGGAGGAAAACAAAACAAAACAAAAACTCAGTAATTTCTTGCCTATC chr4 - 94230402 7060159 7060158 7060217 87170186 87170185 87170244 59 AATTTTTTTTTTTTA---AGAAAAACAAAACAAAACAAAAGCCCAACAAATACTTGCCTGTC .....:.::..:...---..:...................:.:..::..x.x.......:.. 15M3D44M 47/59 79.7% 59/94230402 0.0% 3/59 5.1% 118702143 71512412 +3280 chr4 + 190214555 125786329 125786328 125786411 83 TTTAAAAGACTTCTCCCTCCCCTCACTGTTCCTTCTTTCCCCCAACC--TCACATAAATTGTTTTTTTTTTTTTTTTTTTTCTGA chr4 - 94230402 13009593 13009592 13009677 81220726 81220725 81220810 85 TCTAAAATATTCATCCCCCCTCCCCCCCCTTTTTTTTTCTCCCTTCTGTTTACATAAATTGTTTTTTTTTTTTTGCCTGATTTGA .:.....x.:.:x....:..:.:.x.:x:.::..:....:...xx.:--.:.......................x::.xx.:... 47M2I36M 57/83 68.7% 85/94230402 0.0% 2/83 2.4% 112776736 77437819 +3097 chr4 + 190214555 125786372 125786371 125786440 69 AACCTCACATAAATT--GTTTTTTTTTTTTTTTTTTTTCTGATCTTGGGTTGTCTCACTCACAAATAAAAA chr4 - 94230402 39923748 39923747 39923818 54306585 54306584 54306655 71 AACTTCATTTAGAATCCTTTTTTTTTTTTTTCTTTTTTTCAAAATTAGGTTATCTCACTGAAAAAAAAAAA ...:...:x..:.x.--x.............:......:::.xx..:....:.......x.x...x..... 15M2I54M 52/69 75.4% 71/94230402 0.0% 2/69 2.9% 85862624 NA +3084 chr4 + 190214555 125827962 125827961 125828027 66 TAAACACACACACACACACACACACACACTACACAAAGGGAGGACACTGAAGAGTGTGATACTTCT chr4 - 94230402 39800997 39800996 39801060 54429343 54429342 54429406 64 TAAACACACATACACACACACAATGACACTACAGAAAAGGAG--CACAAGAAAAGGCAATCCTTCT ..........:...........xxx........x...:....--...x::.:.:x.::..x..... 42M2D22M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 86026965 NA +7571 chr4 + 190214555 125830958 125830957 125831425 468 TTGCTGACTTCATGCTTTAAATTCCAAAATATACAATACGTATTAGTGAGCTGTTGGCTGGCTTATTAG---AACTC--------------ACTTGAAAAATATAACGTGACATTTTTCAAAGGTAAAATGAGGTGGCAGAGAATCATGCTTTTTGAATGAACTAGAATTGAAGCAAA-TTTAAAGAGCTTGTTTGTAATGGCTTTGTG-ATTGGGATCAGTTTACTACTTTGTCA---TTATTGCTACTTCACCAACTA-GTATAAGAGCA------AACAAATTTTTAAAAAATATGTT-----TCTTATTAATTTATTTGCCAGAGAAA--ACTTCTGAGTTGCTTGTTTTCAGTTGATTTCTTAAATTTTTGCTTCCAATGATATTTTTTCAGTTCCACTGAAAGAG---------AAGGGGAGTGTTCTTTCCAGCTGTTTAATGGATAGCCTTCCTACTGACATTGACAGCAGTAATTAGTCAGAACAACAATAGTTATACTGTAAT chr4 - 94230402 40341083 40341082 40341567 53888836 53888835 53889320 485 TTATTTACTTTGTCCTCTACCTTCCGAAATACACA-------TTAGTAAGATTTTGGCTATGTTACTTGTTCCACTCTGGATTGGAATAGTACTTCTAAAATACAAAATAAAAATGGCCTAAGTTAAAAC-------------ATATTTTTCTTTGAACAGTTTGGAACTGGACCAAAGTTCAAAGATGCTGTTTTGAATGGCACTATGCACATAAGACTGGTTATCACATTGACACTCTTATCCATGATTAGTAAGTTATGTATGAGTGCATACTCCAACAAATGT----AGAGTATATTATGGACTCTACTGATTTAATTTCCAGAAAAATAAACTATTAGATCTTTGTTTTCATTTGTATGTTTTCTCCCTAGCTCCTTTTCATCCTATGTGATCTCCA----AAAAGTTCTTGAGTATGGAAGGTGTATACTCCTGCTGCTTTATAGCAAGGCTTCCCACTGATGTAGACAGCAGTAATTAGCCAGAGAAACAATGGTCATATTATAAT ..::.x....::.x..:..xx....:.....:...-------.....:..x.x......:xx...:.x.---x....--------------....xx......:..x:.:.x.x.xx:.x...x.....:-------------..xx.x:.:......:::x:.:...:..:.x....-..:.....xx:.....xx......x:.:..-.:xx:::x.x.x...::..x...x..---....:xx.:x..x::x.::..-....:..x...------.......x.----.:.:...:..-----:::..:.:.....x..x.....:...--.x:.x.x..x.x:.........x...xx.x:..xxx:::.x...:.:xx.x..x:.x.x.x.x:....----..:..---------.x..:::....x:x:...x....:..x..:.xx..x.....:.....::.x...............:....:x......:..:...:.:.... 35M7D27M3I5M14I39M13D35M1I30M1I26M3I21M1I11M6I9M4D10M5I26M2I68M4D5M9I93M 287/440 65.2% 485/94230402 0.0% 73/440 16.6% 85489875 NA +3046 chr4 + 190214555 125835233 125835232 125835309 77 CTCTCAAAAAAAAAAAAAAAAAAAAAAAGGGCCACTTCTGACTGCTCCAACTGTTACAGGGCTATTAAAAGATTATT chr4 - 94230402 66442686 66442685 66442762 27787641 27787640 27787717 77 CTCCCAGAAAAAAAAAAAAAAAAAAGACAAACTATGACTCACTTTCTTAATTCTTACTGAGCTCTTAAATGGACATT ...:..:..................:.x:::.:.:xx..x...x::::..:.x....x.:...x.....x.:x:... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 59392547 NA +3017 chr4 + 190214555 125837956 125837955 125837997 42 AAAAAAAAAAAAGAAAGAAAGAAAAGAAAGAAAGGAAAAAAC chr4 - 94230402 32280614 32280613 32280655 61949748 61949747 61949789 42 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAAC ............................:x.xx.....:... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 93557342 NA +3466 chr4 + 190214555 125847781 125847780 125847854 74 TTTTGTTAACTACAAAAAATACTCAATTTAAAAATGTACAGCAGAGAAGATAAATGAATC---TAACAAAATTATTT chr4 - 94230402 37869672 37869671 37869748 56360655 56360654 56360731 77 TTTTGTTCACTGCAAAAGACACTTTATTTGAGAATGTACACCAGAGATGTAAATTGTATCGTTTAATAAAGTGATTT .......x...:.....:.:...:x....:.:........x......x.xx..x..x...---...:...:.x.... 60M3I14M 57/74 77.0% 77/94230402 0.0% 3/74 4.1% 87978109 NA +3002 chr4 + 190214555 125850452 125850451 125850517 66 TCCAAATCACTGACTTTATATTCTCTTTCTTTTTTTTTTTTTTTGACAGTTTTTGCTCTTGTTGCC chr4 - 94230402 80745173 80745172 80745238 13485165 13485164 13485230 66 TCCATCTTACTGACCTCAGCATCTTTTTTTTTTTCTTTTTTTTTAAAGATTTTGGGTTTTGTTTCC ....xx.:......:.:.xxx...:...:.....:.........:.x::....x.x.:.....x.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 45105279 NA +3071 chr4 + 190214555 125891184 125891183 125891232 49 TCCAGTTTCATGGCTATCACTTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 - 94230402 86355142 86355141 86355190 7875213 7875212 7875261 49 TTTAATTCCAAGACCTTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTTT .::.:..:..x.:.:x..x.................:............ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 39536042 NA +3043 chr4 + 190214555 125891192 125891191 125891232 41 CATGGCTATCACTTCTCTCTCTCTCTCTCTTTTTTTTTTTT chr4 - 94230402 71566487 71566486 71566527 22663876 22663875 22663916 41 CATAGCTCTCAGTTTTCTCTCTCTCTCTCTCTTTTTTTTTT ...:...x...x..:...............:.......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 54324705 NA +3068 chr4 + 190214555 125892303 125892302 125892344 42 CAAACATAAGAGGGTTTTTTGTTATTTTTTGTTTGTTTGTTT chr4 - 94230402 20210929 20210928 20210970 74019433 74019432 74019474 42 CAGACATAACAGGGCTTTTTGTTGTTCTTTGTTTGTTTATTT ..:......x....:........:..:...........:... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 105681374 84533181 +3754 chr4 + 190214555 125898807 125898806 125898924 118 CTCTCCCTTCTCTTCTCCTTCCTTCCTTCCTGTCCTTTCCTTTCCTTTCCTTCTTTCCTTCTTTCCTTCCTCCCTCCCTCCCCCCGCCTCCCTCTCTTCCTCTCTCTCTCTTCCTTTC chr4 - 94230402 83016315 83016314 83016432 11213971 11213970 11214088 118 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTC ....:....xxx:...x....x:..::.x.x..x..:x:..:....:..:....x::....:.::::.::x.....:.x:..x..x.:....x..:xx.:.:::x...:...:..... 118M 71/118 60.2% 118/94230402 0.0% 0/118 0.0% 42882492 NA +3865 chr4 + 190214555 125898849 125898848 125899054 206 TCCTTTCCTTCTTTCCTTCTTTCCTTCCTCCCTCCCTCCCCCCGCCTCCCTCTCTTCCTCTCTCTCTCTTCCTTTCTCCCTTCTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCCTTCTCTTTCTTTCTTTCATTCTT------TCTTTCTCTCTTTCTCCTTCT--TTCTCCTTTCTCTGTCTTTCCCTTTCTTTCTTTTTTT chr4 - 94230402 28459063 28459062 28459275 65771128 65771127 65771340 213 TCATTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTC-CTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTT ..x...::..:..x.:xx....x:.x::x.::..:x.x.:..:xx..:x:.....:...::...::xx:x:..x.:.:.x:...xx..::......:.::xx.:.:.x.x:......:.....:x........:....-:...x....------.x.....:x..xx.:.:x:..--.x:.:..x...:.:.:.x:..:x...:.::x::.... 138M1D9M6I21M2I37M 118/205 57.6% 213/94230402 0.0% 9/205 4.4% 97439786 92774769 +3372 chr4 + 190214555 125898899 125898898 125899060 162 TCTCTTCCTCTCTCTCTCTTCCTTTCTCCCTTCTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCCTTCTCTTTCT-TTCTTTCATTCTTTCTT-----------------TCTCT---------CTTTCTCCTTCTTTCTCCTTTCTCTGTCTTTCCCTTTCTTTCTTTTTTTGAGGAC chr4 - 94230402 19053884 19053883 19054070 75176333 75176332 75176519 187 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTCTTCTATTTGCCCTTCC--TTCTTTGTTTTTCAGATGAC .::......:x::.:::x..xx.....:.x...:.....:....xx...:.x::..:.:......:.....:.x....x:x:...-...x:.x...x:..x..-----------------.x...---------.x..x.::.::.x::..:.:.x.:..:.:....--......x.....:x..x... 85M1I17M17I5M9I33M2D20M 103/160 64.4% 187/94230402 0.0% 29/160 18.1% 106845015 83369540 +3695 chr4 + 190214555 125898908 125898907 125899053 146 CTCTCTCTCTTCCTTTCTCCCTTCTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCCTTCTCTTTCTTTCTTTCATTCTT-TCTTTCTCTCTTTCTCCTTCTTTCTCCTT---TCTCTGTCTTTCCCT---------TTCTTTCTTTTTT chr4 - 94230402 45185589 45185588 45185743 49044660 49044659 49044814 155 CTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT---TTTCTTTCATTTTTCACCTTTC-TTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x:.:..:::...:..xx::..xx:.....x:...x........---.:.:....x..:..:x.:.:..-..........x.:....-:.......x...xx.x.....:x..x...---.:...:x.:x:....---------......::.:... 46M3D22M1D17M1I29M3I15M9I13M 98/142 69.0% 155/94230402 0.0% 17/142 12.0% 80713319 NA +3048 chr4 + 190214555 125898929 125898928 125899052 124 TTCTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCCTTCTCTTTCTTTCTTTCATTCTTT-CTTTCTCTCTTTCTCCTTCTTTCTCCTTTCTC------TGTCTTTCCCTTTCTTTCTTTTT chr4 - 94230402 45185586 45185585 45185711 49044692 49044691 49044817 126 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT-----TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCT ..x:..x..:..::....:..xx::::xx:...:.x:...x...:....-----...........:..:-.:..:::.......::xx..:.::........------..::.:..x..x::.x.....:. 49M5D15M1I32M6I23M 76/119 63.9% 126/94230402 0.0% 12/119 10.1% 80713343 NA +6806 chr4 + 190214555 125908525 125908524 125908789 265 TTAGTTGTACTCTAAAACTA-GAAAAAGTGTGTTGCTTATTAAAACCATATTTTCCAATTAAGTTCTTGCAAGGGTTCAGATTGCACACAGTACTATTATGC----------AGGGCTATTTAAGTAGGTGCTATAACTCTTAAGAAGGGGTGCGTGCTCAGTTCCAGACATGGGTTTCTATGACACTTTCACATTTTCATTTGATCATGTAGTAAATAATAACATAAAATCCCAT-ACAATGGCCAAAACTAGAGTTATATAA-TCCTCTGAGTACT chr4 - 94230402 40370000 40369999 40370266 53860137 53860136 53860403 267 TTAAATGTACCTAAATATTTTGGGAAAATGTGTTGTTTATTAAAGTTATACTTTGCTAATAACACTTTGTAACAGTTCAGATTATACAGTGCACTATTTTTTTAAAAAAAAAACGCCTTTTAAAGGAGGAGT----AATTTCAGAAAGCAATATATGCCCCATTTGTAGCTGCAGTTGCTGTGACAAATTCATATTTCAATTTGATCATGTAGTAAATAATAACATAAAATTGTGTGAAAACAGCCAACCCT-------TACAATTCCTGTGAATGCT ...:x.....::x..x.:.x-.::...:.......:........:::...:...x.x.x...xx::...:..x:.........::...xx.:......x.x:----------.x.x..x..x...x...x.:----.x.:.:.::...x::.:::...:.x:..:xx::.xxx:...x..:.....xx....:....:x................................:x::.-.x..::.....xx..-------..:..-....x...:.:.. 20M1I81M10I20M4D100M1I15M7D5M1I13M 170/254 66.9% 267/94230402 0.0% 24/254 9.4% 85538525 NA +3550 chr4 + 190214555 125924023 125924022 125924102 80 ACATGCATACAC--ATATACATATATGCAGGTGTACATATATGCACATATATGTATACATACACACATTCATACACATATAT chr4 - 94230402 27943537 27943536 27943618 66286785 66286784 66286866 82 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACAT .:.x........--:.:....:..:::.......:..x..........:.....::x....:.:x..xx::.x......:.. 12M2I68M 57/80 71.2% 82/94230402 0.0% 2/80 2.5% 97980486 92234069 +19124 chr4 + 190214555 125925599 125925598 125926329 731 TAAAAGGAAAAG---------AAATCAAATAACCTACCACTGGCAGCATATGCTGCTGTATACTTAAAAGAATCTTATGTTGAATCTGGCAGTCTCTATGTCATTTACCAGATAAATCTCTTTACCAGACCTCTCAGGTCAGGTAAAATGCACACCAGACACATTTAAGCCAGACTGCTTCAGTGGAGGAAACACTGTTGGTGGTCACAGACACCAAAGATCCAGGTATAGGAAATTCTGCATTAGGCAGTCTC---------------------------CAATTTATTTCTCCCCTACAGCACCCTCCTCACTCTGCCCCCGTCTTTTGAATTCATGGCTAACATTTTGGAT-TGCAGACTGATTAGACTGTACC-TATCCACTCATAAATTTTAAAATAACCACAGATTAAGTGTGTGTTTATAAGCTAGATGTGTTCTTACCTTTCAGACAGATGGCCATGAATTCAAATAATTTGCTTTGGGGAAATGTAAACAT--ATTTTATCTGTTTGCATCCCAGTCAATGTGAAGCAGCACATACAGCTGGAGTCAGTGCCTACATTGCAAGCCATGAAATACCCTATGGTTCTTGTTAAAAGAAATTATTTCCAAGTATGTGCCATGTGGCTCATCCCCAAAAACCATTAGATGGTTGAAGTGATGTGCGAATAGAGGAGTTTGTATATATATAACAATACATACATGTACAAATAAAATCTTAAATGTGTATTAGAAATAAAAACATCCTAAAAAACTTTAAGAAGGAA chr4 - 94230402 40375574 40375573 40376269 53854134 53854133 53854829 696 TAAAAGGAAGAGCAGGATCCCAAAATAAAAACCACACCATTGGTGGTCACTGGTGTTGTGCT----AAGCTGTCATCTGTTGAATCTGGCAGTCTGCATGTCATTCAGCAGATAAATGCCTTTACCAGAGCCCTTTGGACAAGGAGAATATACAGCACACACGTTTAAACCAGACTGCAAGGGCTGGGGAAGCTCTGTTGGTGGTCACAGACACCAAAGAATCAGGTATAGGAAATTCTGAGTAAGGCAGACATACTTTGAGAGGAAAAAATAATGAGAAGCAAATCTTTTTTCC---------CTCCTCTTAC--------------------------CCAACATTTTGGTTATCCAGGCTGACTGCACTTTAATGCAGCCACTCATATATTTAAGAATGCACAGCGATTATGTTTGTGTGGCTAAACTGTAAGTGGTCTTTCCTTT----CAGATAGCCACAGAGCCATACAATTTGCTTTGGGAAAGCA-AGACATAAATTTTATCTGCTCTCATCCCTGTTACTATAAGGAACCACATACGAATAGTGGCACCGCCTACTCTGCAAACTATTAAACACAGCACAGCTCATGCTAAAGCAAAGTGTT---AACTGTATGCCATGTGGTGAGTCTCAGCAAAGCAAGAAATAGT-------------------GGGATTTTTTGTA--------AATTATTACATGGGCTCA-GAAATCTTGAGCCTGTGCAAACATTAAAAAAATACTCAAAATATTTGAACTGGAA .........:..---------...x:...x.x.x:....:...::.:xxx..x..:...::x----..:xx:..x.x..................x:........:.x.........x:..........x.:..:x..x..:.x.:...::...x..x....:.....:.........xxx:.:x.:....:.x..........................x:..................x:.x......x.x:---------------------------...x.:x...:...---------.:.::..:..--------------------------.:..........x.-.x...:....:.:x...x..x:-:.x.........x....x.:...:xx..xx.....x..x.....xxx...:..:x.x...x....x.....----.....:....:::.x:..x.:.............:..:::-.:....--..........:.:x......x..:.x.:.:.:.x.x.......::x.:.x.x..x:......x:.....:.:..x...:..xx:.::.:..x..:....:x...x.:..---..x.:.:..........:xx:..:.x:x...x..xx.:..:..-------------------:...x...x.:..--------...xxx......x:.xx.-:.......:.::x...::x.:x.x......x..x..x....xx...:.:xx.... 12M9I41M4D188M27I14M9D10M26D14M1I22M1I71M4D40M1D6M2I109M3D43M19D13M8D18M1D55M 458/656 69.8% 696/94230402 0.0% 115/656 17.5% 85550025 NA +3030 chr4 + 190214555 125930097 125930096 125930176 80 AAGTATAATAAAAAAAAATAAATAAATAAAAAATAAAAAAATAAAACAAGAGGACCAAGAAAAAAAAAAAAAGAAAGAAA chr4 - 94230402 86756633 86756632 86756712 7473691 7473690 7473770 80 AAGTATATTGGAAGAAAATATGCAGCAAAAAAAAAAAAAAACACAGTTTAGTGACCAACAACAAAAAAAAAATAATGTAA .......x.::..:......x::.:xx......x.......:.x.::xx::x......x..x..........x..x.x.. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 39173464 NA +11793 chr4 + 190214555 125947605 125947604 125948283 679 GCAATATTTAAAAAGATTTGAATGTTTTTTCTTTAAATATATTACTAAAATACT----CTCTAGTATGAAAAGTATTCTTGCAAACCAAAATATAAACAAATAACTCAGCTGTACTTTTTATATTATGTAGAC-TATGA-ACTATACTTAATGACGT-GAAATGAGGAACATTATGTATTTAATTAAAACCATTTGCAAAAAAATGAGGCATTAGAATCTACTGTAGTGT----CTATAACTTATA---------TCACATTTTCAGTA---------------------AACATTTAACAAATAATTTCTTATAAATTTTCTGAAATATCTTTAAAAA--AACATTTACA---TAAACATAGA--AAGC-TCTGCAAATAATACTGTCTCTAGAGTTTAAAACATACACCAGCATATTAGTGTTGCCAAATCCAGAGAAAATTATG----TTTTTTTGACCCTTGTTTGACAGGTTTTAATTAAACATACAAACATGTTT--------------------------------------------------------------------------------------------------------------------------------TGTTTTTATTTATCCAGAAAAGACTAACTCACTTCTGATAT-TGGGTCTCAAGTCAAATGAATTCAAAAGTGT--AATGTGCTATTTTCACTGCCAGGAATCATATAATTCAAGCATGTAAAATAAAGCAGTGTTGTA-GTCAATATCAAAATAAGTCTACTCAAAACTCCCCGAAAAGAGCCATTTGCCAAAGCAGTTTCTGCTATAAACGATCCATCAATGCCAGGAAATAGA chr4 - 94230402 40379804 40379803 40380649 53849754 53849753 53850599 846 GTAAGATTTAAA--GATTATTATTTCATTTTACTGAACAAAAAATTAAAATACTTACCCTCTCATATGAGGAACAATTTTGTAAACTGTAATGTAAGCAAAGAACTTAGCTGTACTTCTTCTGTGTTATATACCTACAAGAAAATACATAATTGCATTAAAAAGAAGAATGCTATGC---TAATTAAAAACA-----AAAGAAATAA-----TAGACTTTACAGTGAAGTAAGATTTTAACTTGAAAGAGCCAATTTATTTTTGTACCATTTGAAAAGCCCCAAAATTGTAATGTTTACTAGATAGTTGCA---AAATTACATGAAATTGCTTAAAAAATGGAAATCTGCAAAATAAGCAGAAACAAAGCATCTGTAAGTAATAAAACATCTGAACATAAAAATATCAACCAGGAGACAAATGTTGCCAAACGTATACATAATTACTGTACTTCATTAGACCCAAGTCTGATGAATCTCAGTTAAACTTGCAAATACGTTTGAGATTCAATCTGCTTTTGCACCACTTCTATGTCAGGAGAATTCTATTAACTGTAAGGTTATTCTATAATTCTATAAGGTCAGTGGAGACCTTCTGTTGGTATATGAGAAAGGGAGAACCAGGAACTTCACTTTTAGTCTGCCAGGAGAGACATAGCCACTTATGATTTCTGTGTCTTAAGTGGAATGAATGCAAAAACCCCAAAAGTGCAATTTTTACCGCCAGGAATTGTACAGCTCAAGCATGCAAAATGAAGCAATATGGTATTTTAGTGCCAAAGTAAGTCCACTTAAAATTTCTGAAAAACTACAGTTTGCCAACTCAACGTCTGCTGAATACAACTAGGCAGTAATGAGAGATAAA .:..x.......--....xxx..x.:x...:x:.:..:.x.xx.:.........----....x:.....::.::.x.:...:....::x...:...:....x....:..........:..x.:.xx.:..x..-..::.-.xx....x....x:.:.-:...x..:...:::....:---.........x..-----...:....:.-----....x.:...x..::x..----:.x......:x.---------.:.:x...x:.x:.---------------------..::....x:.:...:..x.x---.....x:x......xx...x.....--:.x..:.:..---...:..x.:.--....-....:..:.....xx::x...::.xx.x....:..xx.....x.x.:x.:..........:x:.x.x.x.....:x----..:x..x.....xx..:...::::.:.:.:......x.:....:.:....--------------------------------------------------------------------------------------------------------------------------------:::.....x.:xx....:.:....xx.x:.....x....x.-..x....:....x:.......x.....::x:--..x....x.....:..:.........::..:.::.........:.....:.....:.:.x...-x.:.:.::....:......:...:....:.:.:x:....xx:.x:........xx..::x......:x.x..:.::x:x..:.:x:::..:...:. 12M2D40M4I75M1I5M1I17M1I19M3D12M5D10M5D18M4I12M9I14M21I21M3D25M2I10M3I10M2I4M1I76M4I50M128I41M1I31M2I63M1I96M 442/661 66.9% 846/94230402 0.0% 203/661 30.7% 85567801 NA +14304 chr4 + 190214555 125951268 125951267 125951820 553 AAAAATCTATATT-TTGAATCACAA-CCAACTTTATGCTATTAGAA-ATAAGTGTCCTCCAAACCAATGGAAACTGGCATTCTTGTCTGAACAGAAACCATCTGGAAAAAAAATTCTCATTTTATAATCATTTCAGTATATGCATGATGACATTTAAAAACATCTGGTTTTAATGATGTCCAGAGGACATTCCAGAATGGTGGAGTCTA-----GATGAGGAGATATGTAAAAAAGCACTTCTTAGTAATTGTAATAAGTAGAATGCATAAAAGGGATAAATTCAGGCTAAAGAAA-----------ATGGGAACTGTTATTTTAGGGGTTCTTTGGTAAATGAATCACAAAATAAATAT---AAATGCCTAAATTATATATTGCCTGATGAGTAATTACTTGACTGATCTGAAATCAAAGTCACAGTTGATTTTTAGCCAAGATTCTTGACAGGCT----------GAAATAAATGGAACCAATTCAAACCATTC-TGGCTCAGCATAATTGAGAATCAGTCT------CCAGAACAATAGTCTGCTAATCTACTATCACATGGGAGAAAAAGTAAACTT--GGTTTCGGCTC chr4 - 94230402 40387284 40387283 40387841 53842562 53842561 53843119 558 AAAAATCTGTAGTATTAAACTTCAGGCCATCCCCACCCCATTAAAATAAAAGTCTCCTCCACGCCAGTGGAAACTGGCAATCCTCAATGAGTAGCAACAGCTTACAGAAATATATCTCTATTTGTAATCATTTCAGTGTATGGATGATGACATTTGGAAACATCTGGATCTGATGATGTCCACAGGAGATTCCAAAATGGTAGTGTCTAAACGTGATGATACAATAAATACAAGATGTTTTATTTTAGATTGAAATA--------GAAAAATAGAGACAAGGGCAGGCTTAGATAAGGTATTCAAGCATGGG-------ACTTCAGG-------TGGCAGGGCATACTCCTCTTAGCTCTAGAAAATACCTCCAGTAACAGCCACCTTCTG--------------TGATCTCAGAGCAGCCCTGCAGCTGTTCTCCAGCCAAAATTCTTAACAGGCTTGTGCTCACCAAACTATGTGGCCATAATTCAAACCATTCACTGCTCAACATAATTAAGAACCAATCTCTGAGACCAGAACAATAGTCTGCTCAAGTACTAGCACATGGGAGCAAAATGAGACTTTATGTCTTGGCTC ........:..x.-..:..::x..:-...x.:::.:x.:....:..-.x....x.......x:...:............x..:.xxx...::..x...x:::.:x.:...x.xx....xx...:.............:....x............::..........x.:.:..........x....x......:......:.x.....-----.....x:x:...x:..x..:.xxx:..x..xxx:....x....--------.x.x..x..:..:..:xx......x.::x..-----------.....-------.:..:...-------...:.::xx.xx.x.xxxx..:x.x.---....:...xx.x..xxx::::...xx..--------------......x.:.x..:xx:::...:..x.:.::......:......:.......----------:..x..x:...xxx:..............-:x.....:.......:....:..:...------..................x.xx.....x..........x....xx.:....--x..:.:..... 13M1I11M1I20M1I162M5I43M8D31M11I5M7D8M7D26M3I28M14D52M10I29M1I27M6I51M2I11M 363/517 70.2% 558/94230402 0.0% 77/517 14.9% 85563984 NA +3313 chr4 + 190214555 125953407 125953406 125953583 177 TATATGAATGCTCAGGTATATATATATGTATATATATGTGTGTGTGTATATATATGTATATATATGTGTATATATATATGAGAAAGTAGAAAGTATGGTTTCTTTATTAACC-----AAATTCATAATTCATCTGAGAGACAAAAATAAGCCTATTGAGTAATTATTAGAGCAAAAAAAAAT chr4 - 94230402 52487154 52487153 52487317 41743086 41743085 41743249 164 TGTATCATTTTTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCAGTAGTTTTTAAAAAGGTGGAA---------CCTTTATAAATTTGGAAGGGTTTTTGAATTCTGTAAGTAATATAAA---------TGAGTTATTATCAAAATTAAAAAATAT .:...x.x.x:.:.::.::.:......:..x...:.x:...:..........x..xx.x...:.....:.xxx:.x.x.:.:..:..:...---------:......x..::-----:::..:x.:.x.:x.x.:..x:.:.x...---------.....x.....:.:.::x......x.. 91M9D12M5I29M9D27M 100/159 62.9% 164/94230402 0.0% 23/159 14.5% 73466253 NA +12734 chr4 + 190214555 125976015 125976014 125976288 274 TGGGGTA---TTGCTTATGGTTGTCACATCTCCTACTGTGGCTTTAAA-AGTGATTTGAAAAGTCTGTTGTTTAAACCTCTCAGGCAGATGTTACTTTTACCACCACAGTTAA-GCATGGCTCCTGTGTGTTTGACTTTCAAAATCCCTGCTAAGACCCTTGCTGAGATCAGAAATGGTTTGTTTATTAAATCTATATCTTTACATTGTGTGTGGGGTCTAAAAAGAAATACCAGCTTTGTGACAGAATCCTAAGGGAATACACACTTACTTAATCTTT chr4 - 94230402 40396890 40396889 40397167 53833236 53833235 53833513 278 TGGGGTAGGGTGGCTTATGTCTGTCAGGTCTCCTACCATGGCTGCAAAGAATGATTTGAACAGTCTGTTGTTAAAAAGTCTGAGGCAGATGTTACTTTTACCACCACAGTCAAAGCAAGGGTCCTCAGTGTTTGACTTTCAAAATCCCCTCTAAGTTCCTTACAGAGACGTAAAACAGTTTGTTTATTAAATCTGCAATTTTACAAAACTTGTGAGGTCCAGAATGAAATGTCTGATTCTCTGCAACCTCC-AGTGGGACATATATTTCCTTTATCTCT .......---.x.......x:.....x:........::.....x:...-.:.........x...........x...xx...x............................:..-...x..x....xx.....................:x.....x:....:.x....:xx:...::.................::.x:......xx::x....:....:.:..x.....::.x.x..:x:x:..:xx...-.:x..:.:.:.:.:..x...x....:. 7M3I38M1I64M1I137M1D27M 206/273 75.5% 278/94230402 0.0% 6/273 2.2% 85579125 NA +3384 chr4 + 190214555 125987157 125987156 125987290 134 TATTATATATTTAATATATGATATATAACATATCATATATATTATATGTAAAATATATGATATATAAAATATATACTATATATATATATATATACTATTGTGATGTTTAATATTAAGTGTCAACTTGTTTGGAT chr4 - 94230402 67910059 67910058 67910183 26320220 26320219 26320344 125 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTG-AGATAAATTTAAGCTG------ATTAAATATCAAC--ATTTGAAT .....:....x:....:xx:.x.....x:..xxx...:...x..x..:..xx:.....::......x.....:..x......:..:.:-.x...xxx..:x.x..------.....:.:.....--:....:.. 88M1D16M6D13M2D8M 86/125 68.8% 125/94230402 0.0% 9/125 7.2% 58077098 NA +12782 chr4 + 190214555 125994147 125994146 125994479 333 AAGCATGGAATGTATCATTGGAGGATCTACTGTTGATGAAATCATCGTGATTTTTATAGCCTAGCTCACTTTTACAAGCAA-AGTGCTGCGAGGGTCAAAGCCCTGTTTCATGTCATACGGCAACAGAACAGAGCTGAACACCCACCGTGAGACACCGAGGTGGCCAGCTGGCATGGTGG--CGGCTCTAAAATATTATTTTGCCCACCCAC----ACAGTGTGTTTTAAGCCGGTAAATAAAGAACATACAGTAGTTTTAGAAAATTACCA-ACTATAAACAATT----CATTAGATAAA-ATATTTATAATTAATAAAAAGAAAGGAGACAACACATGAAGTTT chr4 - 94230402 40400503 40400502 40400840 53829563 53829562 53829900 338 AAGTTCAGAAAACATCATGGAGGAGCCTCCTGTTGACAGAATCACAGTA--TTTTATAGCCAAGCTTACATTTACAAGCAGGAGTATCGCAGGGGTCACAGCCCTGCTTCATGTCATGTGGCAACTGAACAAAGTTGAACACACACAGGGAGACATGGAGGTGGCCAGCTGGCATGGGGGGTAAGCACTGCAAAATCATTTGGCCCACCCACTTAGACAGGGTG-TTAAAACCAGTAAAGAGAAATGCAACAGCAGTTTTATAGAAAGATCAGACCATAAATAATTAATCAATTGGATAAATACATTTAT-----ATCAAAAAAGCAGAGGCTGCAGGCCAAGCTT ...:x::...x::.....x.::.:::..x.......:::.....:x..:--..........x....:..x..........:-...:::..::......x.......:..........::......x.....:..:.......x...x.x......:x....................x..--x:..x..:x..x..:....x..........----....x...-..x..:..:.....x.:.:.xxxx....:.......x.:..xx.:..-..:.....:....----x...:......-.:......-----..x....:.:x:...:.x:..x::x...:.. 49M2D30M1I98M2I30M4I8M1D47M1I13M4I11M1I8M5D31M 240/325 73.8% 338/94230402 0.0% 21/325 6.5% 85593644 NA +14844 chr4 + 190214555 126027389 126027388 126027844 456 AGAAGTATTTAACAATTGCTAAAATAATATCATGGCCTTTTTAAAACTTGAGATAATTTGAAGGAGAAAATGCTT--CTTCAGAAATAAATTAATTCATCATTTGT----AGAAGTGTTTT-----CTACAAAAAGAC-TCTGGTAAAAGGGCAAAAAA----GAAAA----GAAAGATAGCTTTGTTAAATGTCAGTGATATGTATCTGTTATTCTTCTGCTTTGCAGACTAATCAACAGAAAACCATTTGCTTTAGAAACAGAGTTGCTATTAGCTCTATATAGAAATTAATGCACTGTAGGGAATTTCTATTGCAAAAAAAAAAAAAGTGTTCTCAAGAATTTGGAGTCATCTGAGCCACCCAGATTGAGTGTTTTCTGGCACCTAAGGTGTTATGATTGCTATGGTTGTGTCACATGATGCTATTTTCTCTAGC-AAATGTAGATTTTAAATGCCGTAAAGAACTTTGCTCAA chr4 - 94230402 40412977 40412976 40413439 53816964 53816963 53817426 463 AAAAGCCTTTAGAACTTTCTGAAAAAGGACTCAGTATTTGGTGAAGCATTAAGGACTTCTTTGAGAAATATGCTTTGCTTCAGAAG--AAGTTACTCAGAATGTGGTTCAAAATGTGTTTTTCTAACTAAAGAGAAACGTCTGGTGCATATGAAAAAAATACAGAAAACTGTGAAAGATATCTTTGTTAAATGTCAGTGTTGTGTGTCTGTTATTTTTCTGTCTTGCAAGCTAATAAACTTAAGACCAGTTGCTTTACAGACAGGGTAGTTATTAGCTCTTGGTAGAAAATAATGTACCATGGGGAATCTACAGTATGAGAAAAA------TGCTCTTAAATATTTGGGGCCATCTAAGCCACCCAGGGTAA--GCTTTCTGGCAGCAGAGGTGTTATTGTTGCCACAGCCCTGCCACAGGATGTTATTCTCTTAAGTAAAATGCAGTTTTCCTAT----TAAAGAATTTGTCTTAA .:...:x....:x.x..x..:...x.:x.::xx.xx:..xx.:..:.x.x.::x.x..:xxx.:::..x......--........:--..x.x.:...xx..x..x----.:.x.......-----...x.:.:.:..-......:x.x:x.x......----.....----........x..................x.:...:.........:.....::.....::.....x...xx..:....x........x.:....:..x.:..........xx:......x.....:..::.:......:.x:.x.:::.:.....------..:...:..:x......:.:.....:..........:x.:.--.:.........x.x:.........x:....:.::.::x..:....x....:....:...:x..:-.....:..x...:xx..----.......:..xx..:.. 75M2I9M2D18M4I11M5I12M1I20M4I5M4I153M6D41M2D64M1I17M4D17M 313/442 70.8% 463/94230402 0.0% 35/442 7.9% 85614412 NA +3433 chr4 + 190214555 126045837 126045836 126045905 69 GTATGTGCATATATATACAGGCATGTATGTACACACACATACACACACACACAC----ACATATATACACACA chr4 - 94230402 4481680 4481679 4481752 89748651 89748650 89748723 73 GTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA .......:x.x:.....x:x.::.......:....x.........:x....:..----........::..... 54M4I15M 53/69 76.8% 73/94230402 0.0% 4/69 5.8% 121564157 68650398 +3093 chr4 + 190214555 126045838 126045837 126045903 66 TATGTGCATATATATACAGGCATGTATGTACACACACATACACACACACACACACATATATACACA chr4 - 94230402 8395797 8395796 8395862 85834541 85834540 85834606 66 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:........x.:..::.xx:.::......::.x:....xx.:.............:.:.x..... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 117650041 72564514 +3913 chr4 + 190214555 126047969 126047968 126048077 109 GTGGATAAAGAAAAAAAT------ATATATATATATGTATGTGAAAAAATATATATTCACATACATATATATATGTATATATATACATACACACACACACACACACCACGGAATA chr4 - 94230402 8395760 8395759 8395870 85834533 85834532 85834643 111 GTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATT----TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:x...x....:.....------:xx:..:.:.:.:.:....x.x...:..:....----.......:...::x..:..xx.....:.............x....x.xx..... 18M6I33M4D54M 76/105 72.4% 111/94230402 0.0% 10/105 9.5% 117652209 72562346 +25274 chr4 + 190214555 126051654 126051653 126052323 670 ACCCAATAGATTGGCTCACAATAGTTTAGATAATCATACAAGAAATCTAATAAAAATAT-GTGACATGGTAATACATGATTTCTATTTCTGGCTTGTCAAG-ATTTGGATTGTAGAGTATAACAAGTCTTAAAGCCATTTATTACCTACTACATGACATTCATTCATGGAGGCCTGCCTGAACTTAGATCTTCATGGATGGCAAGAGGTCAGTTAAGTGTCTGCAGCCAAGTACTAATCCCTCATATATGCTTGCAATGCTGCTGGTGTTTGCCTGCCTTAGAGTGATCACAA-GTCTTA-------------TTGAGTACTCTCATGTATT-------------ATAAGAGAATAAATAGCATTAGGTTTTAACAATAAAGATAAAGTTACCTTCTCTTTTTTCCAGATTTCCTGTGT----AACATCGGAATTAAACTGTTGCAACATTCAGCACATTTTTATCCAGATAAATATTGAAAACATATTTAATGCAATATTGGAGGGATTATAGCATTCAGAAAAGGGAAAGTCTGACTAATGCAGCAGCTGCACTGCATTCCAGCACACTCAAGACATTGCCAGCATTTATTAGCCAGTCAAGTCTTTGACAATAAACAATCTACAGTCCAGGCTCATGCTCTCTAGTGGATAGTTG-TTGGAACTTTGTTTTCATGACAGCATTAATAGCTCTTGTTTCTGT chr4 - 94230402 40417244 40417243 40417934 53812469 53812468 53813159 691 ACACAATAGATCAGCTAACAATAGACCATCTGATTGTTTAGGAAAACTAATAAAAAAATAGTGACATATAAATAAACCATTCCAACTTCTGGCTTGTCAAGGATTTGGACTGTGAGGTATAATGAATCCAAAATCCATCCATTAAATTCCAC-TGACGCT--------AAAATCTATAGGAGCTCTGATTCTTACATAGGGTGACAGGTCAACTCAGTAAGTTCAGCCAAGCACTAAGGCCTGAAATTTGGCTTCAGAAATTCTGACGTGCTTCCACCTCTGAACGATAACAAAGGCTTACCAATGTCATAAATAGACCAAGCACAAGCATCTGAATGAGCAAAGAGAGAAGGAAAAACTGCACTAGGTTTTAGCAGCAAAAACATTGCTACTTTCTGCCTTACACAGATTTCCTACGTGACAAACATCAAAATTAAACAGTTGCAATATTCAGCACATTTTCATCCAGATAAATATTGAAAACATATTTAATGCAATATTGAAGGGATTACAGAATTCAGAAAAGGGAAAGTCTGACTAATGCTGCAGCTGTGCAGCATTCCAGTGAATCCAAGCCACTGCCAGCATTTATTAGCCACTC-AGCCTTTGACAATAAACAATCTTCAGCTCTCGATCATATATCCAGACAGATAAATGAATGGTA--TTGCTTACACAGCCACATTAAC-GCTATCTTCTCTAT ..x........::...x.......x::.xx.:..::.x:.:....x..........x..-.......:xx....x.:x...:.x.:...............-.......:...:::......::.:..:x...x....::....xx.x.:..-....::.--------:.:::..::xx..:..:x...::.:.::x.x..::.x......::.x...:xx.x........:.....xx...x.x..x..x:.x..:x:x.x...::..x:x:.::...:x..::...x....-.x....-------------.x..x:.xx.x..x.:..:-------------.x.::..:.x...:x...:.........:..::...:.:.xx.:...:....x::..x:x..........::..----......::........x.......:..............:.......................................:........:..x.............................x.......::.x.........::x.::....x..:...................x..-..:...................x...::.xx.x....::x::.x::::....:x..-x...x.--...:..x..:::.x:......:-...x.:x.:...:. 59M1I41M1I50M1D7M8D125M1I6M13I19M13I74M4I178M1D56M1I6M2D22M1D14M 469/657 71.4% 691/94230402 0.0% 47/657 7.2% 85634410 NA +3324 chr4 + 190214555 126068648 126068647 126068722 75 AGATGTATATAGGTACACTGAATAAAATTTTTACATTTTAAATACATTGAACTTGAAAAAAAATGGGCATATTTG chr4 - 94230402 66505930 66505929 66506004 27724399 27724398 27724473 75 AGGTGTGTGTATGCACACTGAATAAAATATTTAATTTCTGAGCATCTTTACTTTGGGAAAAAGTGCAAATATTTG ..:...:.:..x.:..............x....xx..:.:.::.:x..x.x:...::.....:..x:x....... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 59562718 NA +31754 chr4 + 190214555 126071656 126071655 126072343 688 TACACATGCACTCATTCAGAACTTCAACAAAGAGAATAAATTCTGGC-TGCTAAGAG-GAAAATAGAAGTAACAGTTTCCTGAGAATTGTTAAGCCAACACACTATT-AAATATACCACCTAACATTGTTCTTTTCCTCTCTCTTTTCACTCTTGCAGCTACCACATGTGATGGAAAGAATCCAAGTTAAACACTCTCACCAGAGCATGCTCCAAGACAGATGACTGAGCCCCAGGCTTGGCCAATACAATGCACTTCTATTCTCTATTTATTTTTGTAGTTCAAAGACCTGGCAGTAACCCACTTGATGCCTGCCATAAGGACCAGTACACTCCTGATTACTGCCCAGCGATTT------------------TATATCT----GTATGCCAGCTACTCA----GACCACGTATAAAGACTAGGGGGATTTTTTGAAAGGAAAAGAAACCCCGGCTTCCACTTATACTTTGAAATTTCAGATGATGTACTGCCAACTTACAGACCTTGCTTTAAT--CAGCAGCCACATGAAAAGGCTGTTTCTATTTACTCTAGGTCATTTAGGAAACAAGCAATAAGTAGGCCTTG-CAAAATTTCAGCTTCT-CTTAAAGTTGGCATGTTTTCCTCA-AATAGAGAGTTGAATCTTGATTTCATTTTCTGAGTAGAAATATTTACAATCCTGTCA-----TACATGAATTTTAGCCTTCCTTCTGTCTAACAAC chr4 - 94230402 40426398 40426397 40427105 53803298 53803297 53804005 708 TACACATCTATTTACACAAACGCTCAGCAAAGATGGCAGAGTTCAGCACCCTATGAGAGAAAATGGGCGTAACAGTTTCCTGAGGACTGCTAAGCCAGCACACTATTTAAATACACCATCTAACATTGCTCTGTTCTTC--------CAATTCTGCAGCTACCACATGTGATGGACAAAATCCAAGTTAAACACTCTCACCAGAGCATGCTCCAAGACAGACAACCAGGCCTCAGGCTTTGCCAATACAATACAGTTCTATTTTCTATTTATTTTTGTAGTTCAAAGACCTGGCAGTAGCCCATCTGATGCCTGCCATAAGGACCATTGCACTCCTGATTACCGCCAAGAGATTTCCAAGCCTACAGACTGCATGTACTTCAGCATATGCCAGTCTCCAAGATCGACTATGCACAAATAGCAGGGGGATTCTCTGAAAGAAAGAAAAAAGCCAGCCCCCATTTCCACTTTGAAACCTTTGATGATAGGCTGCCAACTTGAGGACCTTGCTTTAATCACAGTAACCACATGAAAGAGTTTACTCCATTTATCTTGGTTCATTGAGGAAACCAGTGATAAGCCTGCCATGAAAAAATTCCATCCTCTCCCCAAAATTGGCACACTTGTCCCACGATACAGACT------TTGATTTCATTT--TAAGTGCAGTTACTTACTGTCATATCAGAGAGTGCATTAGTTTT---TTTCATCCTGCCAGATGAC .......x:.:.:.:x..:.xx:...:......x:::.:.x.:::..-:x...x...-......:.:x................:.:..:.......:.........-.....:....:.........:...x...:..--------..x.::......................x.:...........................................::..:::...:.......x...........:..x.......:...................................:....::.....................x.:.............:...x..x.....------------------.:..::.----:........::x.:x.----...:.:.:.:...x.x:.........:.:......:..:.:...xx..:..::...:..x:.........::.:x......:x:..........:x:..............--...:.:..........::.:.xx:..:.....:::.:.x.....x.......x..::.....:xx...x..-x......:..x.:...-.::...:......:::..x:.:..-:...x...x.------............--.:...:x.:x..:....x:..x.:...-----.:...x.:....---:...x.:...:.x:.::.. 47M1I9M1I49M1I31M8D208M18I7M4I16M4I111M2I71M1I16M1I24M1I10M6D12M2D27M5I12M3D19M 513/669 76.7% 708/94230402 0.0% 58/669 8.7% 85645258 NA +3219 chr4 + 190214555 126101238 126101237 126101309 72 TACGTGTATATACGTATATATACGTGTATATATGTGTATATACGTATATATACACATATATACGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ...:..x.....x.::..:..:::......:..::.:.:....xx.....x..x:....:.::..x...... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 73620002 NA +3162 chr4 + 190214555 126101326 126101325 126101413 88 TATGTATGTATCTATACATATACACATGTATGTATATATATACGTATATACGTACATATATACGTATATACGTACATATATACGTATA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ...:..:x:..:x.......x.:.::..:...x......x..x...........:xx.x.x.xx.x.::..:.:..x...:.::.... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 113298540 76916015 +3166 chr4 + 190214555 126101414 126101413 126101560 147 TACGTACATATATACGTATATATACGTATATACATGTATATATACGTATATATCTAGACTTGCAATGCTCCAATTCTTGCCTAGATATGGTTTTGTATCCT---TATT-------TCGTACTCTACAGGGCATTAACATTAACCTG---------TTTCCCAAAGC chr4 - 94230402 71732108 71732107 71732261 22498142 22498141 22498295 154 TGCATACATAAAACTACATATATTTGTGTATACATGTATATAGAGACATAAATTTATGCTTACTATGGGTTAATTCCTCC----------TTTTGGTTCCTAAATATTAGTACAATCGTAATATATGAGAAATT--CATTAATTTAAAATTACCTTTTCCTAAAGC .:.:......x.xx:::......x:..:..............x.x::...x..:..x:...:.x...xx::.....:.x.----------.....xx....---....-------.....x.x..:::.:x...--......::.:---------.....:..... 80M10D11M3I4M7I19M2D10M9I11M 95/135 70.4% 154/94230402 0.0% 31/135 23.0% 54369306 NA +9014 chr4 + 190214555 126142431 126142430 126142667 237 GAATGCATGCAATTTAATGGAAATGGTATCATTAATGGTAT-AGATTGCCAAATGGAGTTCTCTAGTCTCCAGAAGCTGTGTTTACTACCTTTTCCAAAGTGACTTAATGGATTTTTAA--------AACCATGTCTTCAGTTACATTGGTCTTGTTAAATGGAAAGTTTAATTTTAAGCTTCTCCTGATTCCATTTAGTGGAAAAATCTCGTTTGCATAATCCCACAGCTATTCTTTATTGGAAA chr4 - 94230402 40447145 40447144 40447381 53783022 53783021 53783258 237 GAATTTATACAGTACTGTAGAAAT-----CTCTAATAGGATTATCCTGCCAAATGGACATCCCC-TTTTTCAAAAGCTGT--TTACAGACTTTTCAAAAGCTACTTAATGGATTTTTTTTTTTTTTTAATCATGTCTACAATTACACTGCTCTTGCTAAATGGAAAGTCTGATTTTAAACATCTCCTGCTTTCGTTTAGC-AAAATGTCTCATTTGTATAATCCAACTGCTTCTGTTTCTTGGAAA ....x:..:..:.x:x:.:.....-----.x:....:.x..-.xx:...........xx..:.:-x.:.:..:.......--....x:x......x....:x...............xx--------..:.......x..:.....:..x.....:............:.:.......:.x.......x..:.:.....:-:...x:....:....:.......x..x...x:.x...x....... 24M5D12M1I22M1D15M2D37M8I73M1D45M 171/228 75.0% 237/94230402 0.0% 18/228 7.9% 85695286 NA +3145 chr4 + 190214555 126154589 126154588 126154646 58 TGTGTGTGTGTGTGTCTGTGTGTATACACACAGACACACACACACAGACACACACATT chr4 - 94230402 14964828 14964827 14964885 79265518 79265517 79265575 58 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACT ...x..:.....:::x:....:.:..:.:....x........::..x.........:. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 111189761 79024794 +3189 chr4 + 190214555 126174104 126174103 126174241 138 CCAGGAGTATAACAATTTAATTTTAGAAAATTATATTTTATCAAATTAACATGTGGAAGAAGAA------AAATATT------TTAAAAAGTCAATAGATAATAAAATAATATGAAATTTAAAACCATATTTTTCCATTTTTATAAGATT chr4 - 94230402 28941784 28941783 28941923 65288480 65288479 65288619 140 CTAGGAGAAGAACAAT---------GATATTTATATATT-TCATGTTAAATCCTGGAAATATATTGATTTAAATACTCAGAGGTAGAAAAATCAAAATTGGATGAAATAATTTGAAATTTAAATACATATTTTGATGCTTTTATAATATT .:.....x.x......---------..x.x......x..-...x:....xx:x.....:x.x.x------.....:.------.x:....:....x.xxx:..:.......x...........xx........xx:::........x... 16M9D14M1D24M6I7M6I67M 93/128 72.7% 140/94230402 0.0% 22/128 17.2% 97232320 92982235 +19490 chr4 + 190214555 126182319 126182318 126182752 434 AAGATAGAAATAAGGGCCAACCAATCTGATAAGGGCAAAA-GTAGAGGTCTTCCTGAGTTTGTCT-CCAGATATATACCATTTAATTC-AAGCAGATTTAAGAGTCATTTGAACTCA---AGTCAAGATGAAAAGTAGAATTTATCAAGT----ACTGGCCTTCTGATTCTAAGTACAGAGACCTATCAATGTCTGTCTCTTGGCTACCCTTTTTGTAATAAATGTAGGCTTGACGTATAATGAAAACCAGCTGAGTAGTTT--AAGGTACAGATGACTTCTTTTCTTCTTATTCCAACTAAGATTGGTTTTACTCTTCATAATCTCTCACAGCTGCCAAAAATCCATTTTATCTTTGCATGAGGTGAAGTTTCCATTAACAACTATTAGAGTAGCAGAGGTCAGACATCCAGTGTCAGATGTGCTACTAAAAAGAA------TACTGAACA chr4 - 94230402 40451278 40451277 40451724 53778679 53778678 53779125 447 AAGCTAAAGACAAGGGAGCAACACTGAAAGAAAAACATGATGAAGAATGCTTTCAGAAGTTGTTTGCAAGACAGACTCCCTGTATTTTTGAATAGCTTTG---GTCACTTGTACACGTACAACCTAGAAGAAAGGAAGGATTTATCAAGCCAACACCAGCCTCCTTGGTCAGAGAGCAGAGATCTATCAATTTCTATCTCTTAGCTAGTCTCT--GTAATAAATATGGGCTTGGTGCATAATGAAAACCAGCTGAGTGTTTCTCAAGGTACATATGCTTTCTTTTCTTCTGATTCCAGCTAGGATTGTTCTTACTCTTCATAATCTCTCACAGCTGCCAAAAATCCATCTTATCTTTGCAGGAGGTGAAGTTTCCATTAGCAGCTATTATGGTAGCAGAGGTCAGGAATCCTGCATCAAATGAGCTGCTAAAGAGAAACTCTGTACTAAATA ...x..:.:.:.....xxx.x..x.xx:.x..:::..x:.-.x...:xx...:.x..:x....:.-.x...:.x.:x..x.x..x..:-:.::..x...:---....:...x..x.:---.::.x...x....:.x..:..........:----..::....:..x:x..x:..x:......:........x...:......:....x:..:.--.........:.:......::.:....................:x..:--........x...x:............x......:...:.....x.:......................................:...........x..................:..:......x:..............:x....x.::...:...x...:.....:....------....:..:. 40M1I24M1I22M1I11M3D14M3I30M4I59M2D47M2I173M6I9M 326/429 76.0% 447/94230402 0.0% 23/429 5.4% 85731041 NA +7630 chr4 + 190214555 126184656 126184655 126184860 205 AAAATGAAAA-----CAATAGATGCTTTTGGTCCCACA-GTTCAGTTGAAGGGAAGGTCATTTCTTGCCAGCAGGCTATGACTGACTTTAATTAAATATT-TTATACCATCCATCTGCTGCTGTGTACCATGTCTTTTAAAACACAGGAAGCATTAATCT--GCAGATGAATGGTATAAAATA------TTTTTACCATATTTTCTT-CAGTTACAAGTAG chr4 - 94230402 40455850 40455849 40456069 53774334 53774333 53774553 220 AGAATAAAAAACACTCACTGAACCCTCTTTATCCAGCATGATGAGTTGAAGGCAAGGTCATTGCTTGCCAGCAGGCTGTAACTGACTTTGATTATACATTAGTATAGCACTCATCTGCTGCTGGAGAATATGTC-ATTAAAATACAGGAAACATTAATCTCAATAGATTTATGTTATAAAAAGAAAAATTTTACACAATCTTTACTTCCAATTAAAAGAAG .:...:....-----..x.::.:x..:..x:...x:..-.x.x.........x.........x..............:.:.........:....x.:...-x....x..::............x:x.x:.....-x......:.......:.........--::....xx...x.......x:------...x:..x..x...x...-..:...x...x.. 10M5I23M1I61M1I33M1D25M2I21M6I18M1I13M 156/204 76.5% 220/94230402 0.0% 17/204 8.3% 85728806 NA +3093 chr4 + 190214555 126215107 126215106 126215159 53 ATGATACATAAAAAAAAAAAAGGAAAAAAGAAAGAAAAAAATTATAGGAAAAC chr4 - 94230402 91944145 91944144 91944197 2286206 2286205 2286258 53 ATGATATATATAAAAAAAAAAGGAATAGAAAAAGAAAACAGTAACAGACAAAC ......:...x..............x.:.:........x.:.x.:..:x.... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 34270962 NA +21150 chr4 + 190214555 126265420 126265419 126266287 868 TTGGGTTCAATTTTGGTTTCAGATTAAATTGGGATAATTACATAAGTTGTTGACAAATAAATATTCAAG-----AAATTTTGATGGAAGATAATCTTGGCAAACCACAACAGCTTTTAAATTTTGCTTTAAATTAA-AATTCTAGCAGTTTATTATGTTACTTTGTGCCAGGATAAGCCAATAAACCGTTCTCATATTCAAAAGAATGTTTCCATTTAAATTTTACATTTACAAGTCTAATAAGATGTTGGAGCTCATTCTATTCACAGAAAATCTACTGAGTTGCATAACTTAACTT----TATTAGAAAACCAACTCACATTGTTTCTTGAATCAATTTATCTTAGTTAATT--------------TTTTATGATGGAATATTAGAGGTAAAATTAGAGATAATGACGGGCTCTTAAAATAAGGTTACCAAGTAGTTTAATGTAGACAGATAAGTTATGAAGATCATGTGTTCAAAGGTGCATCTTTTG---AATCAGTTTTGAAT-----TTTATATTACTTTATGACCAGTTTAATTAAATTGTTTAAAATACTCT---TTTATGCCCTGTTTAATTTTAGAATATAATTTATAGAAGGTATTTTGAAAACTATATTAAGTACATTAAATCCATGTGGCA-TATGTTTTCATTTACAAGAGATGCCTCATTAACAATGAGACATACTATGGCCAATAAGTGTATTACTCATTCTGCATAGAAGGTACTAAATTATAG---------------GCCAGTTCTGTGAGAATATGAATTGCAATCCT---------ACTCTTGCAGAGTTTCAGAATTC-CAAATTATGGGACATA-ATTGGTATATC-TGATACTTAAATGCTAAGAAATCATTTTGGCAACTGGGTTTCTTCATGAATAGT--ATCTAATTTGCAAATGCATACCCTACA chr4 - 94230402 40475970 40475969 40476866 53753537 53753536 53754433 897 TTTGTTCCAGATCAGGAATGAAACTGATCTGTGTTAATAACTCAACCTGTTGACAAATAAACATTTGAGGGAAAAAAT----ATATAATATAATCCTGGAAAACCAAACTATATACTTCACTTTGTCCTAAATTTATAAATTCAGCTATTCATTATATCATCTTCTGCCAGAATTGGGCAGTAAACTGCTTTCATACTCAGAAGAATGTTTCCATTTAAAATTTGCATTTAAAATTATAATAAGATGCTGGATCTCATTCTTTGTGAGGAA-----GCTGTATTGCACTACTTTAGCTACAATGCTAGAGATATGGTGCATTCTGCTTCCTGAGTAAGTTTCAATTTGCTGGGTGTGTTATTCGCCCATTTTATCATGGGATGTTAAAGTTAAAATTAGTATAATTCAAAGTGTCACAAATGACACTTGCAAAATGGATT----------GGTTAGTTGTTA--ATTAT---TTAAATACTGCATCCTGTGAGCAATCAAATTCTTACCTATATTCATAATATATTATTGACAGTTTGG-----------AAGACAAACTCGATTGCTGTCCAGCATAATTCTGAAATATAATTTATAGCAGTTATTTAGAGAACTATATCAAGTACATTAAAGCCATATGGTACTGTGGTTTCATCCCCAAGAGATGCCTCATCAGCTAAGAGAAGCATTATGATCAATATGTATATTACTCATTTTTAATAGAGTGTACTAAGCTGCAGAAGATTACTGTTCCTGCCAGTTACTTGAAAATATGAGGTGCAACAATTATTTTAGGATTGTTGGAGAGTTTCAGTATTCTCAAGATATAGAAAATATGTTTTTATTTTGTCATGTTTAGAGCCTGAAACATT-CTCTAGAAGCTGAAATCCCCAGAAAGTAGTACACCTTACCAGACAAGGTAAACCCTATA ..x.x.:..:x.:x..xx.x.:.:.:.x:..x.x....x..x:..x:..............:...::..-----....----..:x..x......:...x......x.x:.xx.x:.xx.:....:::......x.-..x.::...x:..:.....:.:.::..x......:..x:.x..:.....:.:.:.....:...:...................x...:......x..x.x..........:....x........x.x::x:...-----:...x:.....:x....x.x:.----.::....:.xx::::x..:x:..:...:...:.x.:...xxx..x.:.::x.--------------......x....:..:...:..x.........x:xx.x.x.x:.xx..x:...xx.x:x..:.x..:.:.x..----------.:.x....:.x.--..:..---..x..x:x......:.x..---.....:x..:xx.:-----..:...x..:x....x:x......::-----------..:.:.xx..---..xx..:..x.:x.....:.::..............x..x.....x..:........:............x....:...:.-.:..x......::x...............:.:.x.x....x::.:....::.....x..:...........:.xx.....:x.......::.::..---------------.......x:x...:.......:x.....:xx.---------.:.x...x..........x....-...:x...:.:.x...-:..xx...x.:-.x..::...:.xx..:.:.x..:-:.:.:.x.:...::x.:.::x:x:.:....--.:..x.::x.xx..x.:.x......:. 69M5I4M4D54M1I134M5D22M4I52M14I72M10D12M2D5M3D19M3I14M5I26M11D10M3I81M1I96M15I32M9I23M1I16M1I11M1I23M1D30M2I27M 560/832 67.3% 897/94230402 0.0% 101/832 12.1% 85789450 NA +14976 chr4 + 190214555 126329100 126329099 126329485 386 TCTGGCAAACATCATGCTG-----CCAGTCTAAAAGAAAACAG---CTGGCTAACAACCATCAGATTAAAATTTTCAGTTTTTTTTCTCCAAGGGTAAACTTAGGGTGAATTAAAGCTCTGAAGTCT---------------ACTAAAACATGTAAATTATACTTTTTTCTCCTGTCAACTAAATAGGCATGGTTTTATAAGCACAGTTTAATCCAAAAAGCAGATGTAGTTTTTCCTTATGATACAAAATAGAGCCAACTGGCATGCTTAGTAGTTTTTTTTCTCTCATGCCATTATTGGAAGGGGCAGGTTGAAAGAACTAAGAATTATAATTTCAGGACATGGCAGTATATGCAAAGAACAAAGTTCCAATTCTTTAGAGGAAATAGAAAAAAAATGGAGAGAGAA chr4 - 94230402 40512716 40512715 40513115 53717288 53717287 53717687 400 TCTGGCAAAGAGCTTACTGTGTCTCCAATCAAGACAAAAGGAGAGACTGGATCACCATAATGAACTCTAATTTTGTA----TTGCTCTAGAAGAATAAAACGAGGGTGAATTAAAGCTCTGAAATCTTTTAGCACAAGAGCAAATAAAAGCTTTAAATTATGCATTTTTTTTCTGTGAACTGAATAAGCACGACTTTATAAGCATGATTTAATCCAAAAAACAGATGCACTCTTCCCTTAAGACAGAAATCTAAGCCAACTGGCTTGCATAAGCATTTTCAAT-----GCGTGATTATTGGACATGGCAGGTTGAAAGAACCAAGAAGCAGAATTGTGAGCCATGACAGGAGATGCAAAGAACAGAGGTCCAAATCTTCACAGGAAATAAAAGTAGGCAGGAGAGAGAA .........x.x.x.:...-----...:..x.:.x:...:x..---....x.x..x.:x..x.:x.:x..x...x:.----..x:...xx...::....x:x.....................:...---------------.x.....xx.x........:.x.....:.:....x....:....:...:.::..........:::.............:......:.x.:..:.....x..:.x...x:x:...........x...x..:xx:....:xx.-----::.:x.........x:x................:.....x:.x....x:::.x....:...x.x............:..x.....x....:.x........:..:x.::xx.......... 19M5I19M3I31M4D46M15I141M5D121M 274/377 72.7% 400/94230402 0.0% 32/377 8.5% 85816384 NA +3059 chr4 + 190214555 126342438 126342437 126342522 85 TTCACAGTTTCCATCATTGCATAGATCAATTACTACACACACACACACACACACACACACACACACACACACGTATATATATATT chr4 - 94230402 87372714 87372713 87372798 6857605 6857604 6857689 85 TTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT .......x:.xx..x.xx.x.x.:.x:x...x.:.x...........x.........:x:.:..::.:::..........x.x.. 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 38969724 NA +3234 chr4 + 190214555 126344166 126344165 126344243 78 TGCAACCTCCGCCTCCTGGGTTCAAGGTATTCTCCTGCCTGAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCTG chr4 - 94230402 18197127 18197126 18197204 76033199 76033198 76033276 78 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG .:..:..:xx:x..:...........xxx...x.xx.x..x.....::.:.........:......x.:....xx... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 108147039 82067516 +3192 chr4 + 190214555 126344556 126344555 126344612 57 GGAAGGAGGGGAGGGGAGGAG-AAAGGAGGGGAGGGGAGGGGAAAGGAGGGGAGGGGA chr4 - 94230402 7707314 7707313 7707371 86523032 86523031 86523089 58 GGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGAA ......:...xx.........-.....::.........x..::.:....:::....:. 21M1I36M 44/57 77.2% 58/94230402 0.0% 1/57 1.8% 118637242 71577313 +8903 chr4 + 190214555 126352378 126352377 126352595 218 AATGTAATACAGCTCGTCTTTCAGAAATTGCCCAACAGATGCTTTTTATATATATTTTGTCCAA----GTACAGTATTTCATTCATTCTTAATTAAATGTTTATATGACTCAAATTTAAGTTAACTTGAAATTATGTGTTTTATTTGAA-TTCTGAGAGCAGGCAATACCCTGTCCTATCATGGAATAATGTAAAAGGCAAACTATTTTAAAATCTTTTCTAG chr4 - 94230402 40521444 40521443 40521665 53708738 53708737 53708959 222 AATATACTACAGATCATGTTACACAGCCCATGGAACAGATGttttttatatatttttttattattattGTATAAGGTTTTACTCATTCTTAATCAACTGTTTACATGACTAAAATTTGGGTTAACTTGAAATTATGTGTTTTATTTGAATTTTTGAAAGCATGCAATGCCCATAGTTGTCCTTGCAGTACTTAAAAACTGAATT-TATTAAAACATTTTCTAG ...:..x.....x..:.x..x..x.:x::::xx........:...........x....xx::.x----...:.:x:...:.:...........:..x......:......x......::..............................-..:...:....x.....:...xxxx:.:..x.x.x.xx.:x.....:x::..:.-.x......:x........ 64M4I81M1I54M1D18M 158/217 72.8% 222/94230402 0.0% 6/217 2.8% 85830934 NA +8564 chr4 + 190214555 126364378 126364377 126364641 264 TTGAGTAATCTTTTTGATAGAATATGCAAAGCTGTTCAACATTTTCT--TTTTCATTTCAAGAACATAT-GAGCCAACTGTTATG-ATGATGTATCTTGTAGGGATTTTGAGACCAGCATGACTTATGTTCA-TAATATTTGGATGTTTTGTATTTTTCTTGGACTTATCTACACATTTGTAAAAGTGCCAGCACAAGAAGGGAAATAAACAAATTTG-----ATCCTCACTCTCAAATATTTAAAGCTATAAGTGTTCTTGTTCTTTGCTCCC chr4 - 94230402 40527329 40527328 40527598 53702805 53702804 53703074 270 TTGAACAATCCTTATT-TAGGATAATCTCAGCTTTACAACACTTGCTATTTTCCACTGTAGGGATATAAAGTGCTAACTATTACGTCTGATGCATCTTGTTGGGAATTTGGGATCTGCGTGACTTATGTTAAAGAATATTTGAATATTTCATATTTTTCTTGGACTCACCTACACTTTTGCTTTGGTGCCAGAATGAGGAGAAAATTAAAAAGATTTTAGGACATCTCAGCTCTCAAA---TCAGTCCTTAATGTTTTCTCATTTCTTGACTCC ....::....:..x.x-...:...xx.xx....x.x.....:..x..--...:..:.x:.:.:.:...x-.x..:....:...:.-x.....:.......x....x....:..:.x..:...........x.-x........:..:...::...............:.:......x....:xxx:.......x.::..:..::..x....x.:....x-----...::x:........---.:.:xx..xx.x..x....::..::...x::.. 16M1D30M2I20M1I15M1I46M1I85M5I15M3D33M 183/260 70.4% 270/94230402 0.0% 14/260 5.4% 85837049 NA +3234 chr4 + 190214555 126370457 126370456 126370511 55 GTGCATATATCTATATGCATATACATACACACACACACATATATATACAGGTTCA chr4 - 94230402 79214675 79214674 79214729 15015674 15015673 15015728 55 GTTTATAGGTTTCTATGCATATGCATACACACCCACACATATACATACATGCTTA ..x:...x:.:.x.........:.........x..........:.....x.:.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 47155782 NA +3112 chr4 + 190214555 126394489 126394488 126394560 72 ATTTTGTTGTTGTTGTTGTTTTTCAGTTGTTTTTTGGCCTTCTTTTCCTTCCTTCTTTCCTTCATTCCTTTC chr4 - 94230402 2688653 2688652 2688721 91541682 91541681 91541750 69 ATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTG---TTTTAAATGTTTTTTCTTCCTACCACTCATTTC .....................x.:x...........---..:.xxx:x..::.....:.:x:..:..x.... 36M3D33M 52/69 75.4% 69/94230402 0.0% 3/69 4.3% 123705836 66508719 +12380 chr4 + 190214555 126398366 126398365 126398597 232 AAAAAGAAGTGTACAAGCTGGGTTTTCCTAGTAAGATTAAGGAGAAATATACCTAGTGTGTATTTGCTAGCCTTATTACATT-TTGGAGTTTTTATTTCCTCCATTATTCGATGATCCCAGATAGGTATCTAAACATAAGGAAGGCAGACTGTTTTCACAGCTGCTCTTACAAAGTTATACCTATGTACTGTAGACCACACAGGAGGAGCACAGTTGCTCAACTATTAAAGTA chr4 - 94230402 40539798 40539797 40540029 53690374 53690373 53690605 232 AAGGACAAGTCTTCAAATTGTGTTA-CTTAGCAAGATGTGGAATAAATGCGCCAACTGTACATTCTCCACCCTCATTATATTCTTGGAGTTTTGACTTCCTCTGTTACTCCCTAGCCACAGATAGGTATCTAAACATAGGGAAGGCAGACTGTTTTCACAGCTGCTATTACCGTGTTGTACCTATGTACTGTAGGCCACACAGGGGGAGAACAGTCATTCGACTATTAAAATA ..::.x....x.x...::..x...x-.:...:.....xx:.:.x....:::..x.x...::...:x.:.x...:....:...-..........x.:......::...:..xx.:::.x....................:...........................x....x:x...:................:.........:....x.....:::..:.........:.. 25M1D56M1I150M 177/231 76.6% 232/94230402 0.0% 2/231 0.9% 85858568 NA +3058 chr4 + 190214555 126434227 126434226 126434288 62 CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTAAATATAACTTTCTTATTTG chr4 - 94230402 27486724 27486723 27486785 66743618 66743617 66743679 62 CTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAAAGCACCTATCTG ...................:x..x...x....:x:.....:..xx.....xx:x.:...:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 98947503 91267052 +3400 chr4 + 190214555 126469632 126469631 126469697 66 CATATGTTTTCGTCTCTACAGAAGTAGTTTTTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 51354273 51354272 51354338 42876065 42876064 42876130 66 CAGATTTTTTTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGA ..x..x....:x..xx.x.x:x..:.................x...:......:........x... 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 75115359 NA +3469 chr4 + 190214555 126469638 126469637 126469697 60 TTTTCGTCTCTACAGAAGTAGTTTTTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 51354282 51354281 51354341 42876062 42876061 42876121 60 TTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGAAGA .....:x:.......x...xx...x............:......:.........xx:... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 75115356 NA +3132 chr4 + 190214555 126469658 126469657 126469705 48 GTTTTTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTTGAGACAGTCTCA chr4 - 94230402 66904541 66904540 66904588 27325815 27325814 27325862 48 GTTTTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTTGAGGAGGCTTCA ................x....x.......x.........:x:.::... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 59565117 NA +4358 chr4 + 190214555 126537834 126537833 126538090 257 TCATTTCATCTGG--GTTGG---TGATTAGTGTGCTAACCCGGATCTGTCATTGCCTGAACAAATCTCAAAAACAGAG--AACCAACATGAGGGCTTTGCTTATGAAGAATCACTATGCTCTTGTGTTCCGGTCATGGATTTATAGCCTCACAAACTGTCTACCCTCTACCGAC--------------TTTTGATGAGATACACAGAATAAATGTTTTTTCAGATTCCTTCCTTCTTCCTCAAATCCGTTAATT-------ATTTTTGGAGTTTGTATCCTGCAT chr4 - 94230402 40583457 40583456 40583737 53646666 53646665 53646946 281 TTATTTTATCTTGTGGCTGAAACTGCTTGGTTTGCTAGCATTCATCTTTTGCAGCCTGAACTTTTCAGGAAGCCTGAGCAAAAAAAGATGTTGATTTT--TCATACTGGACTGCT--TCAGCTGAGTTCCAGGTTTAGACTTATGTGCTGGCAAATTACACCCCCTTTCCCACCCCCCCTCCCCAATTTTTTGATGAGATACCCAGAGTAAGTGATTTCTCAGATTATTCCCTTCCAACTTGCATCATTTTATTATGATAGATTTCTTTAGTTTGGATTCAGTAT .:....:....x.--.:..:---..x..:..x.....:.x:xx....x.:::x........xxx..xx:..:x.x...--..xx..x...xx.::...--.:..:xx.:.:::..--x.xx:..x.....:.x:x.:..:....:xx..x:....:.::x:x....:.x..:x.--------------..............x....:...:..x...:.......x:.:.....:xx..::x...xx..x...-------....:.xx......x..:.x.:.. 13M2I5M3I55M2I18M2D15M2D57M14I66M7I24M 161/253 63.6% 281/94230402 0.0% 32/253 12.6% 85954377 NA +22207 chr4 + 190214555 126539755 126539754 126540138 384 ATAAAGCTGTGTCATTAGTTCAAGTTTAAGCTAAGACTGCTCCAAATTTCCACACA-TTGAATGTTGAAACCATACTTGACTTTGGCATCAGGCAATGTCATTTAATATGTTCATATGGCTTTGCATGCCGTTAAGCATGCACTGTGTATTATTTTATGATGTTTGAGTTGGACTCATACTTTTTGGGTGCACGTATTTGTGTTTTTTCAGATTCTTGTGAAAACCTGGAGAAACCTGTTTCCAATTTCATGACCGTTTATCACTAATCTAAAATGACTGCAGCATTACCTACAGACCTACAGACAGGAAGCTCTAAGAA------------TTGGATCCATCATATATTTGCACAGAAGCTCTGTTAAACCAGTTTTGTGCTTACATAGATGAAAG chr4 - 94230402 40584323 40584322 40584711 53645692 53645691 53646080 389 ATAAAGCCTTGACAGTAGTTCAAGTTAAGCCATAGACTCTTTCAGGTTCCTATGCACTTGAATGCTGAAATTGTATTTGTCTTTGGCATCTGGCAATGTCATTTAATATGTTCTTACGGCCCTGAATGCAGTTAAGCATGCACTGTATATTATTTTATGATGTTTGAATTGGAATCACACATTCTGGGTACAAGTATTCATGTTTTTGCAGATTCTTGTGTAAAGCTGGGAGAACCTGTTTCCAATTTCATGACCGTTTATCGCTAATCCAAAATGACTGCAGCATT--------ACCTACAGACAGGAAGCTGGATGAGGGCTTGTGTGTTTTGGATGCATCACGCTCTTCCCAGGAAACTCTGTTAAACTAGTTTTATGCTTACATGAGGGGAAG .......:x..x..x...........x.:x.xx.....x:.:..::..:.:.::..-.......:.....:::..:...x..........x......................x..:...::..x....x................:....................:.....x...:..x..:.....:..x.....::.......x............x...x....:::..............................:......:.................--------..................xx.x..:------------......x.....:::x:..x.xx:...:...........:......:.........:::x.:... 56M1I230M8D25M12I65M 305/376 81.1% 389/94230402 0.0% 21/376 5.6% 85955432 NA +10403 chr4 + 190214555 126545223 126545222 126545776 554 TTAGAAAAATATGAAAATATATCAAAAGCACAGAAAAATGTGCTTCTTTGTGTAACATTTAAACAATATATACCATGGTGGAACATCAGATATTTAAAA----ATAAAAAT------AATTACTCCATTTGGTATCATGCAACATCTTTCAAAGCACCATATAAATTTTAAATAAACAGCTGAGCAGAAATTTTCAACCAG------CACGGGAATACACAAATACTTATATTTTTTCCATATGGGAAGAAATTATCTACATTACAGTCATTTTATTGTTCATTGCAGAGGGTTATGTGAAGCAGATTGAATTGAACTTTTTTATTTCCTTTAGAAAACCAAACCTGGAGTTTTTTTTTTTTTTTTCTGCAAGAAATTGCGTATAGATTTAGCACATTCACTGAACCCTATTACAGGTATTTTTTAACCAGAGCCAACAACTGCGAACT--------TCTCTTAATCGCTCACTGACTACAGGGTGTGTGTTAACAGAAGACACACAGAAGCCATAAAGGAAATCGCCCCCAGCT--GTCTATGACCTTAATATTCAGATATCCATGTTTCCATATCCTT chr4 - 94230402 40588460 40588459 40588985 53641418 53641417 53641943 526 TCAGGACAACATAACTATGTTTTAAATGCTCC-AAAAGTATCAATTTTTA-ATGATATTTGAATG--------CGTTTTGTTATACCACATATTTGAAATATTATGAAAATTGGCAAAGCTGCCCCACT-GTAAACATAAGGTATTTTATACAGGGCC-TATATATTTAAAATATAC----GTGCAATAAATTTTAAGCAAATATATTACAAAGATATAGAAA-ACTTATATTTTTTCCATATGGAAAGAAATAATCCCAGTTACAGCCATTTTATTGTTCACTACAGACAGTTATGTGAAGCAGATTGCATTCATTTTATTTTTTTCCTT--------CAAATCTGGA------------TTTTTTTGC-AGATCCCTCACATACAGTTACCACAATAACTGAACCCTGTTGCAGACAGTGT---------------AACTGCAATGTAAAAGCTATTTCTTCGGCTCT-ATTGACAGAGCAGAATGTTTTAGTGTGAGCTCTTAAAAAACGGGGAAACAAACCAGTCCTACATGGGTTCTTGTCCTTGGTCCTCAGAGATTCATGTCTTCATATCCTT .:..:.x..:..:.xx..:.x.:...x..x.x-....:.:.xxx.:...:-:.:.:....:..::--------.:.xx..xx.:.:..x......:...----..:.....------.::.:.:...:.-.xx.x...:x:::..:..x:.x..x:..-....x....x.....x..----.x...:x..x...:..x..:------:..::::...:.x...-.....................:.......x...:xx:......:..............:.:....x:..................x...x.x:..x...x.......--------....:.....------------.....:...-...xx::x.::...x.x...x....x.x..........:..:...::.x.x.---------------......:.xx.--------.:....x:x.x..-.:....x:x:x:.x:...x...:::x:..x:x:xx.:..:.x:x:..:x...:.:x:..:.xx.--..::x..x....::.x:.....x..:.....:.:......... 32M1D17M1D14M8D26M4I8M6I12M1D28M1D18M4D20M6I16M1D107M8D10M12D9M1D52M15D11M8I13M1D64M2I43M 335/500 67.0% 526/94230402 0.0% 80/500 16.0% 85956763 NA +3015 chr4 + 190214555 126553290 126553289 126553337 48 GAGATTTATAATGCTTCTAGATTCTTAAGTTTGCTTTTCTGCATCTCT chr4 - 94230402 79333446 79333445 79333493 14896910 14896909 14896957 48 GAGATCTGTAATACTTCTAGATTTTTAAGACTATTTTCCTGTATTTCT .....:.:....:..........:.....x:.::...:...:..:... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 47219844 NA +3216 chr4 + 190214555 126560457 126560456 126560503 47 ATACACATATACATATATGTGTGTATATATATATGTGTGTGTGTGTG chr4 - 94230402 19704280 19704279 19704326 74526077 74526076 74526123 47 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .....:......:.....:.x...:...:.x:............... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 106856177 83358378 +3372 chr4 + 190214555 126561237 126561236 126561325 89 TTTTCGTTTTATTTAGTTCTCTCTCTCTCTCTATATATATATGTTTAATATATATTTTTATATATATTAAATATATATATATTATATAT chr4 - 94230402 71295502 71295501 71295590 22934813 22934812 22934901 89 TTTCAATTTTTTTTTAATCTCTCTCTCTCTCTATATGCACACACACACTATATATATATGTATGTATATAGTATCAATTTCTTGCATAT ...:x:....x...x:x...................::.:.:::x:.x.......x.x.:...:...xx.:...xx..x.x..::.... 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 55265735 NA +3418 chr4 + 190214555 126586137 126586136 126586220 84 TGGCCACAAAGCAAGTCTCAACA-----AATTAAAATATTTATATTTTATATATATATATATATATATAAATATATATATATATATATA chr4 - 94230402 28944729 28944728 28944817 65285586 65285585 65285674 89 TGGTTGGAAAACTAGTTTCAAGATGAGTAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATA ...:::x...:.x...:....x.-----.:xx......x.x.:........x.:.:.:.x.........:....:.......:..x... 23M5I61M 61/84 72.6% 89/94230402 0.0% 5/84 6.0% 97641408 92573147 +16808 chr4 + 190214555 126606969 126606968 126607537 569 TCATATATATTTTAGATAACTTTACTATTTATGC-CAGACACACACACACACACACACACACACACACACACACACAAATCATCTTTTATTACCTTTCAAGGAGAAATTTTTAAACAAAAACAAGAAACACTGTATACTTTTAAAAAAATATTTGCGACACTTATATTGGGATTTGGGGAGGAAATTGGGAGTTTTATGCTTATTGTTACGTA-----GCCATTTTCCTGGTTCTTTTGAATTGTTCTTAAGGTGTAATGTTTT-CTTCATAATGGTCAAGCATTTTCTTCTTCTTGCTTAAAAATGATAGTTCACTTTGAAAGCAAAGATCCATATAACACACTCTTCGTTTAAATCT-ATATAATGAAATAAAATCTTTATGTCCACACAT-TTTGAGCTCCTACCTTCATGCATTTAGAGTGTGTTACATTTCCCAGTTTTCTCATATTTAATGTTTTATGGCCTGTTCTCCAGATTCAGGTAGTAAAATGTTAGAAGGTACATTTAAATAGACAGAAAGGCTGCAGAA-----ATGTATTTAATTACAGACAGCTTAGAATAAAAACCTTTGCCCAGTT chr4 - 94230402 40612228 40612227 40612760 53617643 53617642 53618175 533 TTGTATGTCTTGTTAAGAACATT-TtatatatacatatatatatacacacacatatatacacacatgtacacacacacatCACCCTGGTCTGC------------AGATTTAAAAAAAAAAAAAGAGAAAGTGAGAG-----GAAGAAAGTGCTATGATA--TATCTGGGAGGTTAGGGTGGAG---------TCTTCACTTCTTTGCATGTATGAATAACTTTATTAGGATTGCTTTGATGCTTCCTGAAGGCATAATATTTTATTTCTTAATAGTCA------------TTCTCACTGAAAACTGATAGTTCGCTTTGAAAGCA--GATTTATACTGCAGGCTCTTCATTTAAACCTTATGTAAAGATATAAAATCTTTATGTTCACGCACATTTGAGCTCCTACCTTCATGCATTTATAGCGTGTTACATTTCCCAGTTTTCCCATATTTAACATTTTACAGCCTGTTCTCCAGATTCAGGTAGTAAAATGTTTGAAGG------CCAGAAAGCAGAAAGCAGGCAGCAGCTCGGTGT-TTTAATTAGAAATGGACAAGCACAGACATTTCCAACCTGTT .::...:.x..x.x:.x...x..-:...x...:.-:.x.:.:.:.........:.:.:.......:::.........x....:.:.xxx:.:.------------.:x...x...x.....x....:.x.x..x:x:-----:..:...xxx:.::..:.--...x.x..::x..:...x...:---------.:.x::...x..xx:.:...-----:x.x..x.:xx.:..x:.....xx:x.:..x....::....:....-:...x....:....------------....::..x....x.........:...........--...::...:x:..x:......:......:..-..:...x..x...............:...:..:-..........................x..:.....................:.........::.....::................................x.....------:x.:x.::.......xxx....x.-----:...-........x.:.::.x:x..x.:.:.x.::.:::x..x... 23M1D10M1I58M12D32M5D18M2D22M9D20M5I46M1I14M12D35M2D31M1I33M1I108M6D24M5I4M1D41M 371/519 71.5% 533/94230402 0.0% 64/519 12.3% 85994741 NA +3349 chr4 + 190214555 126619090 126619089 126619159 70 CTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAGGTAGCTGTGGTTACAAGCATGTGCCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.............x...x..x.x........::..:.......x:::....--.:..::....:::. 54M2D14M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 108421951 81792604 +3114 chr4 + 190214555 126619762 126619761 126619801 40 AAAAAAAAAAAAACACACACACACACATAAGTACATATAT chr4 - 94230402 71167190 71167189 71167229 23063174 23063173 23063213 40 AAAAAAAAAAAAATACACACACACACATATATATATATAT .............:...............x:..:...... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 55452572 NA +3128 chr4 + 190214555 126624411 126624410 126624448 38 AAACAATAACAACAACAATAAATAAATAAATAAATAAA chr4 - 94230402 88813179 88813178 88813216 5417187 5417186 5417224 38 AAGCAACAACAACAACAACAAATAAATAAATAAATAAA ..:...:...........:................... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 37811232 NA +3666 chr4 + 190214555 126631849 126631848 126631945 97 ATCATGGTTCACTGTAACCTCGACCTTCCAGGCTCAAGTGATCCTCCTACCTCAGCCTCTCAAGTAGCTGGGACTACAGACATGAGCCACTCTACAT chr4 - 94230402 18197118 18197117 18197209 76033194 76033193 76033285 92 ATCATGTTCTAC---AGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTGTAT ......x.::..---.:..:x:.x....::..:.......x.:.x.xx:x........:............:.....--..:..x:.....x.::.. 12M3D62M2D18M 66/92 71.7% 92/94230402 0.0% 5/92 5.4% 108434731 81779824 +3075 chr4 + 190214555 126632927 126632926 126632987 61 TGAGAAGAAGCGAATGATGGAAGAAGGAAGGACGAAGGGAGAAAAGAAGGGAGAGGGGAAG chr4 - 94230402 11678395 11678394 11678455 82551948 82551947 82552008 61 TGGGAAGAAAAGGGTGAAGGAAGAAGAAAGGACTAAATGAGAAAAGATGCCAGAATGGAGG ..:......:x.::...x........:......x..:x.........x.xx...:x...:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 114954532 75260023 +3025 chr4 + 190214555 126632952 126632951 126633002 51 GGAAGGACGAAGGGAGAAAAGAAGGGAGAGGGGAAGAAAGGAAGGAAGGAA chr4 - 94230402 35162195 35162194 35162245 59068158 59068157 59068208 51 GGGATGCAGAGGGGAGAAAGGGAGGGAGAGGGGAGAAAAGGAAGAAAATAA ..:.x.xx..:........:.:............::........:..:x.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 91470757 NA +3533 chr4 + 190214555 126651433 126651432 126651515 83 CTATTCTATCATTATATATATATATGTGTATATATATGTATACATACGTATATATGTGTATATATGTATACATACGTATATAT chr4 - 94230402 52481225 52481224 52481306 41749097 41749096 41749178 82 CTCTTCT-TCTTTACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATAT ..x....-..x...:..:x.....x.:...:..:..............:.:...:xx:....x.:x....::.::..x..... 7M1D75M 59/82 72.0% 82/94230402 0.0% 1/82 1.2% 74170208 NA +3100 chr4 + 190214555 126651477 126651476 126651544 68 TACGTATATATGTGTATATATGTATACATACGTATATATGTGTATATATATGTATATATACATATATA chr4 - 94230402 17853465 17853464 17853532 76376871 76376870 76376938 68 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTA ..:x.:.x...:..:.:...........:.x...xx.x...:.::...:......x.x.:.....:.. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 108798012 81416543 +21293 chr4 + 190214555 126658243 126658242 126658824 582 TATAGTTTCATATACACCA--ACTACAATATTATTGCTAAAGATGAATGTGAGACTTATTCTTGCCTTCTCTGTCTTCCCCTACCCACAACACACTATATTTTCAATCTGAAATGGTTTGATTTGAATTGCAAATCTCATCACACATATAGTTTTATTCTTTTCTATCTGGATGAGTGACAGTGGTATATAAGAGTTAACAAACCTTATCCAGTCTTAAATACATTTCTGGTATTGAAAGCTAACAGAGCTGAAAGTTGAATGGGAGAAAGCTCAGCTCCTGTATTCATTCTTTTATTTGTGTTCTGAAAGGGCCTTATGGAGGAAACCTGATAGAAATGTCATGGCATTACTAAATAGATCGAAGTCCAAGGT---------AGGAAAATAAAAGGTTGGCTTTGCTGCTTCTTTTGTCATTTTACAAGCAGTGGATAGTGCTTTCAAATG-AGGGCCTGAGGCTATGTGTGTCCTTTAATTCC-CCAGCCCCTGAGAAGAAGTGAGTCCATCCCTCAATGTTCTACTGAAAGAAGCCTTTAAAGAAACTTTATGTTCCAAGAATACAAATCC-CTTCTAAGGATGACAACAAAA chr4 - 94230402 40625392 40625391 40625970 53604433 53604432 53605011 579 TATAGTATCATGAACAGTACTGTTATAATATTATTGCTGTAGGTTAATGAGATCCTTTATACAGTCTTCTTTCTC----------CAAAGTAGACTATTTTCAAGAAATAAAATGGTTTCATTTGAATTGCAAATCCTATCACA----TAGTTTTATTCTTTTGGGTTAGGATGAGTGACAGTGGTATATTAGAGTTAACAAACCTTACCCACTTTTAAATACATTTCTGGTATTGAAAGCTAACAGAGCTGAAAACTGAATGTCTAAAGGCTCTGCTCTGGTATTCATTCCTTTATTGAAGCCTTGAAAGGACCGTATGGAGGGAACCTGATAGAAATTTTGTGTTGCTACAGAACAGAACTCAGTCCAAGGTTAAAAAAAAAAGAAAAAAAAAGGTTAGCTCTGCTGTCTTTTATATAACATCAT-TGCTGGGGCCAGTGCTTTCAAAAGTAAAACCAGGAGCTGTGCAGCTTATTTGATTCAGCTAGTCCCTCAGTTTAATGGACTACAGGCCTGGCAAAATTGCTGAACCAAAACTTCTGAAAGAC--TATGACTCCTGTACACAAATCCACTGGTGTGGGGGGTAGCAAAA ......x....:x...x:.--::..:............:x..:.x....x..xx...xx.x:x.:.....:.x..----------..x.::.x.....x..:xx:.xx.:.........x................::......----...............xx:.:x.....................x.................:...x.:........................................::......xxx:..:....x....:x..........:......x:x.:::.......:..x........:..............x.::..x:::...x:..:...x.xx..........---------.:.....x........:...:.....::.:..x.:.x.:x.:.:-x..x.x..x:............x.-.:::..x.::...:..::xx.:x...:....x-.:..:....x..xxx..xx..x.x..xx...x:xx:xx:.:.....xx..:x...:x:.:.:..--....x::.xx.x.:........-..xx.:x..:x.::.:..... 19M2I54M10D59M4D226M9I44M1D24M1I32M1I64M2D22M1I21M 404/565 71.5% 579/94230402 0.0% 31/565 5.5% 86032851 NA +14351 chr4 + 190214555 126678244 126678243 126679045 802 GATAGGAGCACTCAAACATCCCC-AGAAAAATGAGAGTGGAAAATGAAGCAATAACGCTAGAAAGTGAATCT--------TGGAAGGCAAAGATCAAAGGTCTATTTTCACTTATTTTTCTAACAAACAGACAGCAAGGATACATGTACAAAGGCACTCTAAAAGATCAGGGGGACAAAGGGAAGACCTAGTATTGTTAATGAAGAACAAACTACAAGCCTTACAGAAATTTTAGGTGTGATTCT-----------TCTACTATTTTTTAACTTTTGACACAAATA---AAATGCATACATGCAA-----TCTCTCTAAC-CCTTTAGCTACATATCCAAATATTGTAGGGATACT-------TTGAAAAATG------ATACCT-TATGCAACCCACCAACTTGAAAGGGCTTTTATTTGAAAGTGTTTTCTTTTGT-TCTAAGCTAAAAA------------------------TAATAAAATAATGGCTGAGCACAGTTTCAGATTGAAGTGAAGCATCAGGAGACTGTTTCAAATTAAACATGAACCTCTCCAAACGTAGCCAGCATGAAGAGATAAGAGTCATGCACCTCCG--TGAGAGCTCACACACACAACAAACCCCTTCTTGTTTACATGCCTATTAAGGGTTCCCAGCAG---CTGAAATTATTTCACTCAATTTGATTCCATCCCCATTCTCCATGGCTCATTTACCAATTCCTATACAGGGCTATTCATGCTCCTTGGGAGAAAGTGAAG-GTGAATATTGTATTTACAAAGGCTAAACCCAGACAAAAAGGATTTCAACAATTACTGCCACAATTCAGATTC---CACAATTCAGATTCCACAA---TTCCCCTTAAGACTATCTTCT chr4 - 94230402 40631642 40631641 40632476 53597927 53597926 53598761 835 GACTGAAGTGTTCAAAAATCTCCTAGAAAAATATTTGTG-AGGATTCAGAAATAACCTCAGGAAGTTAGACTGACTCTATTGGAATGCAAAGTTCAAGGGTTTATTTTCACT-ACTCCTGTTATAAACAAAGAA-ATTAGTACAATTGCAGCAGCATCGCAGGAG------GAGGCAGAGGGAAGA------------AATGAGGAATAGTTGGAAAGC--TAGAAAAAATGCAAACATTATTTGAAGGCATCGGGTATATTGCTGCTGTACTCTCCGTATCAGTATGGATATGAGTACACTCGAGGACTTTTCACCAATATCTTTTCCCTCCTATCTGAATTATGGAATAACACTACAAATCTTGAAGGATGTTTTAGATGTTTCTATGTGA---ATTAAGATGCAAAT-------TTCTAAAACATTTCCTTGCACATATAAACAAGAAAAACAAAGAAAAACAGAAGGAGGAGTAAGAAATTAA--AATAAGCTTCATTTCCTGAGCATGCAAACCATCAGG-GATTGTTTCATCTTTAACATTAAAAGCCCCAGCCATCGCTAGCATGTAGAGATAAGAAATTCACACCTCCACATGAGAGCTCATACA-------AACTGTTTCTTGTTTATATCCCTATTAGGAGTTCACAGCAGTCACCAAGATTATTTCACTTGATTTGATTCCTTCTCTGTTCTCTACGGCTCATTTACCAAGTCCTATACAAAGCTATTCATGTCCCTTGAGAAGAGCCGAAGTGAGAATTTGTAACTCACAAAAGCTGCAGCCAGATAACACAAAGTGGAGCCCTTGCCATCACAATGCCATTTCTCTCACAGC----ACTTCACGAATGATCTCACTGAGGCCATCTTCT ..:x.:..:::.....x...:..-........:xxx...-.::..xx..x......x::..:....x.:x..--------.....x......x....:...:..........-.:.::.x.x.:.....:.x.:-.xx::....xx.:..:x:...::x:.::..------.:.:..:........------------.....:...:.:x:x:x....--..x.:...x.x:.::::.x...:x-----------.x..:.::.x:.xx...:.:x::.:x.:..---.x...x:....:x.:.-----.:..x.:..:-:....xx.:x.x....::...xx..x.:x:.:...-------.....::...------..:::.-....::.---.::..xx..x..:x-------..:x...:::...:...x:::-.x...:.x.:...------------------------...x...x...--:x.:...x:x:....xx:xxx.x.::..x.......-..:.......xx..x.....x..xxx.:...:x.:.x..:......x..........:x:x::.......:--..........:...-------...:x:..........:..x.......:.:....x......---.::.:...........::..........x..:.::.....:.:..............x.........::..........::.....:..::.:x:....-.x....x.xxx.:.:.....:...:x.x.....:..x.x::.x.xx.:.xx..:.:::......x.x:x...---....::----.:.:...:.---x..:.x:.:..:.:....... 23M1I15M1D32M8I32M1D21M1D30M6D15M12D21M2D24M11I30M3I16M5I10M1I35M7I10M6I6M1I7M3D14M7D21M1I13M24I11M2D36M1D71M2I14M7D41M3I99M1I72M3I6M4D9M3I21M 496/755 65.7% 835/94230402 0.0% 127/755 16.8% 86046602 NA +11568 chr4 + 190214555 126687730 126687729 126688081 352 AAGAATTTTCATT-GTCAATAGAAATA-----TAAGGCACTGCTT-TGTCAGTGCAAAAACGACCTGGCCAGTAACATGCAATTGTGCCCCTTGACTCAGCAAGCCTGAATAACAGTT---TAATTTGTTTACAGAGCTACGAGAAATCTCTATTTGTGTACTGTA------------TGTATTTTATACAACTGGGAAAAAGAGTGTGTGTTCTTCAGAAGACTTGGCAGCACAACTGAACATTTTCCTTGTTAAAATCACGAA--------------------------TTCCTCTTTTCTTGGCCTTGTATTTAGGTGATATGGAGAAGGCAAAAATATGACGGTAAATAAGAA---TACCTAATCACTGGAAAACCCAAAAGATATAAATTGTACTTAG chr4 - 94230402 40643973 40643972 40644373 53586030 53586029 53586430 401 AAGGATATTCTTTCTTCAGTAGAAAGAAAACTTCAGGAAGTGCTTCTGTCAATCCCAGTAAGACTTCAACAGTAACAAGTAACCTCCATTCTTGACCCAGCAAGCCTGAACTGCAATTAATTGGTCTGCCTGCAAAGCTATGAATAATTTCTCTTTGTGTACTGTAAAATAAAATGTATATATTTCATACAGCTGGGAAACAA--TACCTCCTATTCAGAGCTGCTGGCAGCACAACAGAGTACTTTCTTTGTTAAATCCTCTGAAACCATCCCCATCCCCCACCTTTTTTTTTTTTTTTTTCCAACTCTGCTTTTAGGTGCACTGAAGAAGCCAAAAATATAAAAGTCAACAAGAAGAGTGCATGATCACTGGAAAACTAAAAGGATATAAATCATTCTTAG ...:..x...x..-x...:......x.-----.x...x.x.....-.....:.x.x.:x.x...:.x:x........x.:..::x:xx::......:.............:x:..:..---.::.:..::.:..:.....:..:x...:...x.............------------.:.....:.....:........x.:--.::x.x:.x......:xxx:............x..::.:....:........x:.x.x:.--------------------------..::.:....:::::.::..:x........xxx..:.....x.........:.x:..x..:.....---.:.x.:.............:x...:.........::.x..... 13M1I13M5I13M1I72M3I45M12I25M2D60M26I66M3I43M 247/350 70.6% 401/94230402 0.0% 53/350 15.1% 86043757 NA +3820 chr4 + 190214555 126706748 126706747 126706919 172 GAAGAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGACAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGACAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAAGAATGAACAACTTAATGCAT-CCCAGGTATA--------ATATTAATTATGCATGATTTATTAGTCA chr4 - 94230402 61334696 61334695 61334866 32895537 32895536 32895707 171 GAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAG------GAAGAAAGAGGAGACAGATTGGA----TTTATGCATACCCAGGATTAAGCTGTGCATAGGTACTATGCACAATGTAATAATTA ...xx......:.....x......x.:x.....:..::::::...x.xx:.x.:.:xx..x.::...x.x.....:x..:..:...:..x..------:....:.:.:..:.x...x..:.----..x......-......xx..--------...xxx.:......::..x..x..:.:. 92M6D23M4D9M1I10M8I28M 107/162 66.0% 171/94230402 0.0% 19/162 11.7% 65372052 NA +3384 chr4 + 190214555 126706776 126706775 126706847 72 AGAGAGAGACAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGACAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .:...x........::..x:.x...:..x::..:x::...:.::.:.:...x........x........... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 101639791 88574764 +10315 chr4 + 190214555 126719919 126719918 126720274 356 CTCCAAAACGACATTACCTCACAAGGAAGAA-TGTAGCACTACATTAGTTTTTCAAGATTGGATAAAGCATGTTTAGGCTAAATGCGGACATCAGCAGTTTTAAAACCTAAATCTGATGCAT-CTGCACTCTTTATTGTCTTAGAGGTTCCATCAGTAAATGCTTAAAGTCTTTCTCCTGGCAG-------CAAAAGTCTCCAGTGAGGTTTTTATATGATTTGCTAAGAAATGCCTGTTTTCAGAAGTCATTCTTTTCAATCCCCAGGGAAG---CGTGTCTGCTGGAGTAACTCTGCCTTCATGCTACCTGCTAAATGACTTGGGAAAATCTCC-TTATACAGAAGCAATATTTAAATTAGAAAAGA chr4 - 94230402 40655889 40655888 40656243 53574160 53574159 53574514 355 CTTGAAAAAGACACTACCTCACAAGAAAAAAATCTTGCACTGTACTAATTTTATAAGATTGAATTAAGCCTGTTTTTGTTAAATATGTATAGTAGCAGTTTTGAAACCCAAATCTGATGCGTACATCACTCTACGTTTCCTCAGAGGTTCAACTGATGGATATTCAAAATCTTTCTCCTGGTAGCAAGTAACAAAAATCCCTAAAGAGACTTTAAT---------CAAAAGGTTTATGTTTTCCAAAATTGGTCTTTCTTGTT-----GGAAGTAATGTGGCTTCTAGAGATAGCAAATCACCACTTGCCTTACTGTGTTGCTTTGGAATATTTTCACTACCCAGAGGCAGTATTTGTGTTATGAGGGA ..:x....x....:...........:..:..-.x.x.....::.:..:....x:.......:..x....x.....xx.:.....::.x.:.x:.........:.....:...........:.-.xx......x::..x:..:........x.::::.::..::.:...:............:..-------.....:..:.:.:x...::...x..---------:..:.::.x:x.......x:..:.::x.....::x:.:-----.....---:...x..x..:...xx.x:xx::.x:..:x:xx.:.:..:x:.x:...x....x..:.:.-:..:x....:...:.....:x:...x:.::.. 31M1I90M1I61M7I25M9D38M5D5M3I60M1I32M 225/342 65.8% 355/94230402 0.0% 27/342 7.9% 86064030 NA +30802 chr4 + 190214555 126741609 126741608 126742736 1128 TAATTAAAAACCACAACTGGCCTCAAAGAAGTACAATTTT-----GTTAAAATTTTGCCCC-ATGAT-ATATTCTAAATTAAAAATTAGTTTGCATGCATCTTTTACAAAGAGTTAGATCCTCCTAATGTAGAAAAGAGAGGGC---AGAAAAAGGTCTACTAGGTAGAGAAGAAAATGACCAGCAGCCTGCTCAAA-TTGCCTTAGTTTGGAGCTCTTCGTGAGGTAGCTGGAGAAAAAGGCACTGCTCAT--GAAGTGGGCAGA-GTGAAG-GTTTTCATCATGTTACACGGTTTCCTTGTGTAGATCACCAGATCACAAGAGAGTCAGCTTTGGAAATTACTAATCAGTGCCAAAAGAGCACTGTTCCAAAATTAATA---TAAATTGCTTTAATATTTCTCCCTTCTATAAATTTATATTCATGCTGTAGGTTTGGACCTACTTTTGAAATATTCTTACAAAGGAAAGTTACCAACTCCACAAACTGTTTGTGAGAGTATTAGAAGTGCCAATTGAAACAGGAATGTAATAACACTGTGAAATTGCATTATCTGTCAAGTTTCTAAAGCTTATTCAGGTGCTTATTTAAACCCTTGGAACCTGGAGGGAAATGAACATGGGATGACTTTTCATTCAGGTTGCCATAACATTTCAGTACTGAAACTTCATAGTGGTCTACCAGACACCGAAAATAAGGTTTCGGCAGT-AAAACAAGTGTCAACAAACCTCATGCTTCTGTGCAGAAATA--GCAGCTACTAATAAGGTAACATCAGTACATTATAAATAATCCCTGAGACAGTCTCAAAAGGGGTCTACAGTATCAAACACGTGGAACAGAAATAGAGTAAAGACACCTTCGAGGCCATCCAGAAATGCCAAAACAAGGTAGTTTATAGCACAGGCAGTCTGAAATATGCCAGTCAGCTCCAGGTGCCAACATCCACACTTTGGAGGAAATCACCAGGACGTTTCATTATTTGATGGAACAAGCAGACAACAGGAATGTCTCAGTGTCAGTGCTTTTATTAAAAGAAATTCATATTCATCAACACATCTTAACTCAGTCAACAGTTTAAAAGTTGGAATGAAGCATGTCATTCAGGCCAG-GAGGTCTTTGGTCCAAGTTAAACAAACTCAGAGAG chr4 - 94230402 40676954 40676953 40678054 53552349 53552348 53553449 1101 tattaaaaaaataaGACCAACATCAAGGAATGGAAATATTACATGGATACGATTTGGCCTCTGTGATTGTGTTTTAGACTAAAAATCACCATGCATATGTCATTTAAATGTAACTAG-TACTCTTTAGATTGGAAACAAATTTCTCTAGGAATAG-CCAATGAGAGAGGGGAAAAAAAGAACCCTGGCCAACAAAAAATTGGCTTTCTTAAGAACTATTAATATAAGATCTGATGAGAAGGGCATTTGTCTGCAGAACTGGGTAAATATGAAGTATTTCCACCATT---CATTTTTTCAAACAGTAAATCACTAAGACATAAG----CCAGTATCAGAAAA-ATGGTCCAGAGCCAACACATCTATGGTCCAAAATGAGTTGGTTAAAATAACTTAATAATTATACCTCTTACAAAT--ATGTTTATGTTCTAG-TTAGGAACTATTTTTAAAATGCTCC-----AGAAAGGCAAACAGACATACAAATAGTTTTC-----TGCATGAAGTGCCAACCGAAACAAGCATGTAATAACATTGTGAATTTACATTATCTGACACATTTCAAAAGCTTATTCAGGTGCTTATTTAAGCCCATAAAACCTGTAGGGAAATAAAGACAGGATGACATTTCAGCCAGCTTACCATAACATTTTTCTAGTGAAATTGCATAGCAACATATTAGATGCTGAAAAAAATG--TCAGCAGTAAAAATAAATGCTAA--------AGGCTTCTGTGGAAGACTAACGCAGCTACTGTTAAGGTAACATCAGCATATTAAAAAGG-----CATGATAGTCTTAAAAGCACTTTACAGAATCAAATGTATGCAATGAAAATATCGTAAA-ACATCATCTA---CACTCTAAAACAAGAAAACAAGGCAGTTTATACCACATGCTGTGTGAAATCTGTGTCTCAGATCATTCTGCCAATACATACAATTTGGAGGAAACCACCA-AACTTTTCATTAATCTGT-GAACAAGCAGATAA---GGATATCTCAGTGTCAGAGCTTTTCATAGATAAAATAAATATTCAGCAAAACATCTTAACGTAGTCATCAGTTTACACACTGGATTGAGACACACCACTCTAGCTAGTGTGATTTCTGGTCCAAA-AAAACAAAC-CAGAAAG ..x.x.....x:.x:..:::.x....:...xx:x...x..-----.x..x:....x...:.-:....-:.:..:..:.:.......:.x:x.....:::..x....x.x:x.::...-.x...:.x.x:.x.:...x.:.xxx.---..:..x..-:.x.:x..:x..:.:.:....x..x.xx::...x:.xx...-...x...xx..x:..:..x..x:.:x::x.x...:x..:..:....:.xx..xx--...x....:.:.-:.....-:...:..:...x---..:xx....xxxxx...:.....:.::x..:...----:...:x.::....x-.:x:x:...x.....x.x.x.xx..x........x.:.x---....x.:x:......x..x.x...::..:....--..:..:...:.x...-..x...x...:....:....::..:-----..:..:.:x.x..:x:x:.....:x....x:-----.::xx..........::......:.x...........:......x..:.........x..x:....x.........................:...x.::......x........:..x.::.......x.....x:...x..:...........:xx..x.....:.x.....::::x..::...::.:.....x..x.--..:.....-....:..:..::..--------.x.........x.::.x..--.........:x..............:.:....x...x:-----::x..:.....:.....x:x.:.....x......::::..x..:::.....xx.....-...:.x..x.---..::.x:...::xx.........:........x....x..x..x......x..:xxx....x..xxxx......:.:x:...x...........:.....-:..x........x.:x:.-...........:..---.:..:............x......xx..:.x:....xx.......x...x..........x:.....x.......x.x::....x...::..:::..:..x:..:..-.x.:.:.:........:-x........-....:.. 40M5I16M1I5M1I49M1D26M3I8M1D41M1I54M2I12M1I6M1I12M3D34M4D14M1D39M3I33M2D15M1D25M5D31M5D200M2D8M1I14M8D19M2I38M5D58M1D10M3D100M1D18M1D14M3D107M1I17M1D9M1D7M 744/1079 69.0% 1101/94230402 0.0% 71/1079 6.6% 86064655 NA +3100 chr4 + 190214555 126744446 126744445 126744523 78 TTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTTATGAAAGGAGACTTTATAAAT chr4 - 94230402 37425223 37425222 37425299 56805104 56805103 56805180 77 TTTGT-TCTGAAAAAAAAAAGAAAAGAAAAAGAAATAGACAGTGGAGTAGAAAATTAAGGAGTAGATATTTTTAAAAT .....-..x:..........:....:.....:...x...x..x.:::x........x.x..:x:..x.:...xx.... 5M1D72M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 89319223 NA +3029 chr4 + 190214555 126744449 126744448 126744494 46 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGA chr4 - 94230402 6438506 6438505 6438551 87791852 87791851 87791897 46 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGA ....:.....:.....::............::.:..::...:.... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 120305943 69908612 +3120 chr4 + 190214555 126744464 126744463 126744508 45 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATTTATGAAA chr4 - 94230402 25247412 25247411 25247456 68982947 68982946 68982991 45 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCTTGAAA ...............:.:.........:...x....:.:x..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 101497052 88717503 +3034 chr4 + 190214555 126744465 126744464 126744499 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAA chr4 - 94230402 48383086 48383085 48383120 45847283 45847282 45847317 35 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAA ..............................x.... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 78361379 NA +3004 chr4 + 190214555 126744466 126744465 126744500 35 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAAT chr4 - 94230402 87676347 87676346 87676381 6554022 6554021 6554056 35 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAT ...............:...............:... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 39068119 NA +13365 chr4 + 190214555 126791778 126791777 126792286 509 AATTATAAAAGCTTTTAATTTATTGT-TGAATTCAGTGTGCCAGCTAAATTTATCATAAACTCTCAAAAACATGAAATAATGGTTTGCAGTTGCACCTTCCCAGATAATGAAGTGGATT-TTACGGCAAGAACCAGAAGTTGATATCCCATCCATCCTGATCAG-------GCTGAATCAGCCAGGGATGAGCAAA-------------GGTTGTCTGGAA-------CTCAGCTTTTAAAACAATGTGTCAATATAATAATTTCTTCCATCATGATGTTTCATATCAGAATAAAAACCTGATTTCCAAAGAATAATTGATCCTAGCATT--GCAAGGTGCAAGTCAGCCAAAACTTATCTGATCTTTTTAATACAAAAATCACTATATATCAAGAA---CTCAAGTCCAGTTGTATGGGGCTTTAAAATAATGTGCAAAACATGCTGTAGCAGTTGTTTTATGGTCTTATCCTCTGATTGGCTGGCTGAGAATTTGGAACTCCCTCATCATGTTTATCTGCTCCTAGTATCCCATTGGGAGC chr4 - 94230402 40698789 40698788 40699316 53531087 53531086 53531614 528 AAATATAAAAGCTTTAGATTTATTGCCTTCATACTGCGTTCCAGCTAATTTTATCATTCAGTCACGTAAGTATAAAATAATGACTTGCAGTTGCACCTTCTCAAACAATGAGGCAAAGGAATATGGCAAGGAGCACTAGC-----ACTCTTTTGCTGAGAACAGAGACTCTACCTAATTGGCTAAGGACAAACAAAACCTTTTAAATGGAGTCATCCAGACAAAAACTCTCAGTCTTTAAAACAATATGACAGTAAAATAGCTTTTCCTCTCACAGTGTTCC----TATAAAAAAAACTTCATTACTCAATAATAATTAATCCCAGGGTTCCCCCCGATGGGAGT--GCCAAAATTGCTTGAACTTTTCCTATCCAAAATTAATTGCAGATCAAGCAGCGCTGAAGTCCAGTTGTCCAGGATTT--ATTTATTGT-TGAAACATACTGTAAGCGTTGTTTAATTCTCCCACTTTCTGAATAGCTGGCTATGGAAATGGAAAT-ACTCATCATGTTTATCTGTTTCTGGATCCCTGTTATTAGC ..x............x:........:-.xx..x.x.:..x........x........xx.x..x.:x..::..:........::................:..:.:.....:.:::.xx-x..:......:.x..xx..:-----x.:.x.:::::xx..x...-------:.:x...::..:.:...::.:....-------------:..::..::..x-------.....::...........:..x..:..x....::..:.:.:x...:::....:.----:.x..x......:.x...x.:x..x.......:....:..x:..--x.xx.:..x:...--.......:.xx.:x:.::...::x..x.....x.x.:.::.x......x.---..x............x::..::..--.xx..x...-::......:.....:xx.......x..xx..::.:::.....x.:.......:x.:.xx.....x.-x.................:.:..:.xx:..::..:xx... 26M1I92M1I20M5D19M7I25M13I12M7I54M4D44M2I13M2D50M3I24M2D9M1D66M1D40M 332/494 67.2% 528/94230402 0.0% 49/494 9.9% 86092989 NA +3036 chr4 + 190214555 126793740 126793739 126793831 92 GTCAAGAAAAACTTTCAACTTAATGCATATTATTAAGTCAACCA-----------------------------GACTTGAATATATATATATACACACATATATATACATACATATATACA chr4 - 94230402 45271609 45271608 45271728 48958675 48958674 48958794 120 GTCAAGGAATCCTTATAATTTTATGAAAAATACTAA-CCAATCATCATGAGGAGAAAGATTGGAAAAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ......:..xx...x:..:..x...x.x.x..:...-:...:..-----------------------------:....xx....x.....................::.....x.:.:... 36M1D7M29I48M 69/91 75.8% 120/94230402 0.0% 30/91 33.0% 81522131 NA +3070 chr4 + 190214555 126793861 126793860 126793930 70 ATATACATATATACACGTATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681917 8681916 8681983 85548420 85548419 85548486 67 ATATCCATGTCTG---ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ....x...:.x.:---:....x..:..:....:...::.:.:.:...:.....x:.:............. 13M3D54M 49/67 73.1% 67/94230402 0.0% 3/67 4.5% 118111944 72102611 +3039 chr4 + 190214555 126793864 126793863 126793937 74 TACATATATACACGTATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200254 4200253 4200327 90030076 90030075 90030149 74 TACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT .....x.x...xx...x.xx.:x.:..........:.:.:.........x....::...:xxx.......x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 122593610 67620945 +3209 chr4 + 190214555 126793873 126793872 126793927 55 ACACGTATATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 71856861 71856860 71856915 22373488 22373487 22373542 55 ACATGTATACATTTGCATGTTTATATATGTATGAAAATACATTTTTCTTTTTTTT ...:.....:..x.:...:.x.......:...:x.x...:......:........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 54937012 NA +3038 chr4 + 190214555 126793880 126793879 126793935 56 TATATGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::..:.x:....:...:..:.:..........x....:.x.........:.x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 34058532 NA +3291 chr4 + 190214555 126793884 126793883 126793939 56 TGTACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:.:..x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 34058536 NA +3110 chr4 + 190214555 126793886 126793885 126793939 54 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 122593612 67620943 +3199 chr4 + 190214555 126793886 126793885 126793941 56 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .:.....x.....:...:..:.:......x.x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 34058538 NA +3254 chr4 + 190214555 126793886 126793885 126793937 52 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:x.....:...:..:.:...............:.x.........:.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 34058534 NA +3049 chr4 + 190214555 126793887 126793886 126793944 58 ACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865516 89364887 89364886 89364944 58 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTT .:............x.:x.x...x.x.x.:.........x..x....x.......... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 121928428 68286127 +3067 chr4 + 190214555 126804812 126804811 126804866 55 TCAAAAAGAAAAAAGAAAAAAAAGAAAGAAAAGGAAAAAAGGAAAAAAAAGAAAA chr4 - 94230402 9490823 9490822 9490877 84739526 84739525 84739580 55 TCAAAAAAAAAAAATACAAAAAAGAGAGAGGTGGCAAGCAGGGAGAGAAAGAAAA .......:......x.x........:...::x..x..:x...:.:.:........ 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 117313989 72900566 +15783 chr4 + 190214555 126851302 126851301 126851829 528 CACAGGGCATATTTACAC--TTTCAGCATTTATCACTTAAAATTAGCCCAATTATATTGTGGGAATGCCAATAAAAAGAAATTTTCTCAAAAAAGCAGAAAGAAATCTATTTCTATGTATACTTAAGAAAATCTGGCCACTTAACCGAAGTATGCTTCACAATAAAATCAAGTCAGAAAAACTAGAGTGTTTTCAGAATTTCAATCCCTGCTCTCAGTTCCAGCACATCTGCAGGAGTAATAAGTTTTCTGATTTCTAAGAGGCTTGTGGTTAACCTCACAGCATGGAATGAATTATTTA-CAATTCTATCCTTCATTAAAACACCCTTTCCATGAAATGTGTCAATGAAGTCAGAACCTGGCTGGCCACTGATCAACCAGAGCACTGACCATCCCC---TTTTTCTGTTTCCATTGTATTGCTTAATTACAACAAAATGTAGTCATTTATTCCCAAAAGTTTTAAACTGTTTATGTTGTGCCC------TCACTAAAAAC-ACCTATAATGTTTTAATTTGAACAAGGTGTATATGTACA chr4 - 94230402 40713575 40713574 40714079 53516324 53516323 53516828 505 CAAAGCACACGTTTAGATGTTTTCTGGGTTTATTACTCTGACTTTG------------GCTGGAAGGTTGATAAAGA------TTCTGGAAAATGCAAAAGCAAATCTATTTTTTTATT------AGAAGTTTTGGCAGCAGGTTGGGTGCGTGCTTTACAGTCAGAGAAGGGTGGGGGGAATGGAGCACTGAAAAAGCTTCAGTCACAGCACTGAGTTCCAGCACATCTGCTGGAGCAGCGAGTGCTGTGATTTCTGAGAGGCTTGTGGTTAACCTCATGGCACGGAATGAATTATTCCTCAATTCCATCCTTCATTAAAACAGCCATTCTCTGAAATGTGTCAACGAAGTCAACACATGGCCAGCTACTAATCAGCAGTACGATGGTCCATCCCCAAGATGCTCTGGTT------------TTGGCCGGAACAAATCAGAGTTTTTTGTCCTATATGATTTTAAGCTGTTTATGTTGTACCCAGTCTAGCCCTATGAACAACTTATCACAATTTAATTAAAACAGCCTGTATATACACA ..x..x:..::....x.:--....x.x:.....:...:x:.x..x.------------.:x....x.:::.....:.------....x:....x...:..:x..........:.x.:.x------....:x.:....x:.xx:x:x.:x.::.....:...:.x.:.xx.:.x::.::::.x.:...:::.xxx.:.::....:..x.x..x..x.................x....:.:::...x:.x........:.....................::...:.............:x-......:................x..x...:x.............:.......:x..x....::..:...:....:.x:x.xx.:x.x........---x.x:....x..------------..:::::x......x::x...:x...:.:.:xx.x::......:.............:...------x.x...x:...-..:...x.::x.......x:....:xx.......::... 18M2I26M12D19M6D36M6D175M1I96M3I11M12D61M6I11M1I39M 336/492 68.3% 505/94230402 0.0% 49/492 10.0% 86137727 NA +3115 chr4 + 190214555 126905515 126905514 126905589 75 GTGTGTGTGTGTGTATCTATATATACACACATATATATGAGATCTATAATAGAAG-AAATAAATGGTTCACCCTTT chr4 - 94230402 65311256 65311255 65311331 28919072 28919071 28919147 76 GTGTGTATGCATATATTTATATATACACACATATATATGGACTGTGCAAAAACAGTGTATGCGTGCTTTTCCCTTT ......:..::.:...:......................::x.x.::..x.:x..-:x..:x:..x..:x...... 55M1I20M 53/75 70.7% 76/94230402 0.0% 1/75 1.3% 61594259 NA +26311 chr4 + 190214555 126916803 126916802 126917331 529 CACTGTCATTACATTATGCTGCAGGCTGCATGCGGTTTCTATTCTCGTTTCCATTCTGTTGCTTTCAATGTTTTTGGAATCAGTTGAAGCTGAAACATCTTGGAAGAAAAGTTTGGTTTTTTTTGAACCCCCTGGTTTCAATTATTTCTAAATCTGACGCACAAACACTGCTTTTAAAGATATGCGACTGAAGTGCCAAATAAGGATCTTTTGATTTTTTGAAATACATGTGGTTGAAATTTGAGACCTGGCTGCTGCCAAGCTGCAGTTCAGGGAATAGAATACTGGCACAAGAAAATGAGCCGTTGTTCAGAGGATAATGTTAGAAGGAACTGTCCTAC-AGAAGGAAAATGTAAATTTTCATGATTTAGCTTATGCTTGTGGGACAATTCCATAATCCTTTGTTAAACACGTAAAAGTTGAAATGCTGACTCTCCTGTTGTTTATTCAGGTTCTCAGCTATAAATTTCTCACATACATAAGCCTGATTTAGACTAAATCCTTATAATATTAATTTTTTAAAAATGCA chr4 - 94230402 40724494 40724493 40724982 53505421 53505420 53505909 489 CACTGTCAGTGCAATATGCTGCACAC-------------------AGTTTCCATTCTGTT---TTCAATGCTTTTGGAATCAATTGAAGTCAAAACATCCTGGAAGAAAAATTCAGTTTTTGC----ACCCCTGGTTTCAATTATTTTTAAATCTGACGCACAAACACAGCTTTTTAAGATATGTGAGTGAAGTGCCAAATAAGGAACTTATGATTTTTTCAAATACATGTGGTTGAAATCTGAGACCTGTCTGCTGCCAAGCCACAGTATTTGGAATGGAGCACTGGCACAAGAAAATAAGCCATTGTTCAGAGAATAGTTTTAAGAGGAACTATCCTGCAAAAAGAAAAAAGTAAAATCCCAAACTTTAGCTCATGGCTAAGAGACAATCCCATAATCCTTTGTTAAACACTAGAAAGTTGAAATAGAGATTTTAGCAATGTTTATCCAAGCCCTCAGATGTAATCTTTTGATATAAA----------CTATACTACAGCCT-----TCTTAATTCTTCTACATTACA ........x.:..x.........x:.-------------------x..............---.......:...........:......:::.......:..........:..::......x:----x...................:....................x......x........:..x..................x...x.........x...................:.........x............::....x:xx.....:..::................:....:..........:...:.x...::.......:....:.-.:...:....x.....x.::..x:x.......:...x:.:x.:......:.....................xx:...........:xx..:.:.xx::x.......:..:.::.....x.:...x:..:.x.:...x.----------:..x....x.x...-----.x......:..:x.x.x.:.. 26M19D15M3D60M4D214M1I138M10D14M5D21M 390/488 79.9% 489/94230402 0.0% 42/488 8.6% 86192309 NA +3446 chr4 + 190214555 126958613 126958612 126958890 278 AAACATATCCACACACATCTCTGCAACATAACTGTAAACCTCAGTTGCAGATACAAATACTTTAACTGCCACATACAATTTTATCTTAGTAAAATAGTCATAATATTAATTCTGAAGAGCTAT-----------ATCTCTCTACAGAAGAATCTGAAAACC----AGCTAAATGCCAAACTCA-GATTAAAAACATATTTTTGTACCTTGTTGGTAAACCTCAATAAATATGTTTCTCATAATCCATCAGTATTTAATTAACATATGATAACTGTCCTATTAAAGCTAAATGAA chr4 - 94230402 17184795 17184794 17185059 77045344 77045343 77045608 265 AAACACATCCATGTTCTGCTTTGCTTT-TCCCTGAAATTTTCAATTG-AGGTTTAAGTATTT--------------AATTTAGGCTTCATAAAACTGttaaaatatataaaataaataGCAACTACCTACTCAAACATATTTGCAGAGTATTGTGGCAATTCAATGGGTCCATATCAAATTCACAATTATGAATCTATT-----ACATAACTTTTAATCCTTTGTGAATAT----TTAATAATC----AGTATTCAAATACCATACACTAACTGTCCTATTAAATCTAAATTAA .....:.....:::x.xx..:...xx:-.xx...x..x::...:...-..:.x:..:..:..--------------.....x:x...x:.....:x..:.x.....xx.xxx.:..x...x.:-----------.:x.x.:.:....:x.x.x..:x..::----:.x.xx..::....:...-:....x:..:x....-----..x.x::.xx...x...:x:.:.....----:.x......----......:..x..x....::x................x......x.. 27M1D19M1D14M14D47M11I27M4I18M1I15M5D27M4D9M4D46M 162/249 65.1% 265/94230402 0.0% 45/249 18.1% 109773818 80440737 +3797 chr4 + 190214555 126960719 126960718 126960823 105 AGAAGAGAGACAAGAAAAGAAAAGAAGGAAAAGGAAAGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAGAAAAAGAAAGAGAGAGAGAAAAGA chr4 - 94230402 55334390 55334389 55334493 38895910 38895909 38896013 104 AGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATAT-AAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGA ......x:..:...:.:x:.xx.....:::.:...:.:::.:x.x.x-................x.x...:..:......:...x:.::x:x...:..:..:... 47M1D57M 68/104 65.4% 104/94230402 0.0% 1/104 1.0% 71626329 NA +3109 chr4 + 190214555 126960723 126960722 126960825 103 GAGAGACAAGAAAAGAAAAGAAGGAAAAGGAAAGACAGGAAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAAAAAAAGAAAAAGAAAGAGAGAGAGAAAAGAAA chr4 - 94230402 22042113 22042112 22042215 72188188 72188187 72188290 103 GAGAGACAAAAAAAAAAAAAAAAAAAGTGCAGAGAGGAGAAACCCAGAAAGGAAGTTACATAGAGAAACATTAAAGCAAATCTTCAGAGAAAATCAGGAGAAA .........:....:....:..::..:x.x.:...x::....xxx..:.......xx.x.x.....:.x.xx...:x...xxxxx.....:.:xx.::..... 103M 66/103 64.1% 103/94230402 0.0% 0/103 0.0% 104918610 85295945 +3403 chr4 + 190214555 126964534 126964533 126964598 65 AAATAGGAAAGGAGAAAGGAAGGAGGGAGGAAAAAAGAGAAAAAGAAAAAAGAAAAAGAAAGGAG chr4 - 94230402 67066632 67066631 67066696 27163707 27163706 27163771 65 agaaagaaagGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAG .:.x..:..:....:.........:.:.......xx:.:..x.::...:..:...x.:....... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 59897902 NA +3302 chr4 + 190214555 126964542 126964541 126964612 71 AAGGAGAAAGGAAGGAGGGAGGAAAAAAGAGAAAAAGAAAAAAGAAAAAGAAAGGAGGGAGGGAGCAAGGG chr4 - 94230402 37322370 37322369 37322440 56907963 56907962 56908033 71 AAGGTGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGG ....x.....:..:.xxxxx.xx.......:.....:........:.:...:.:..x.....::.x..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 89642172 NA +22517 chr4 + 190214555 126971394 126971393 126971940 547 AGCATTGGCCCATACCCA-----GAATCTCCATCCATATCCCAAA-GTCTTCTTTAGAAAAATCTCAAAGATGTTCTTTCCTATTCATTGAGTGCCACTGCAGGAGGATCCATTCCTTAGTTCTCTGCAATGCTGAAACTCTGATTTCCTCTGGGGAAAAAAAAAACGCCAAGGGAGGGAAGAGGTGAAACAATTGCTACAAAAAAATTTTACTTAAGGTAAAATCATATGTTTTCCTCCATTGGTCATATTAACGTATGGTGCATTAAAATTTAATCTCATAAGTCTTTATTATTCAGTCATTTAATCACACGGAAAGTGTGGTAATTTAATTAAAACAAGTAACATAGGTTAGCTATCCCTTGGGATACAAACCTAGG-AAAATGATCTAATCCATTGGGTTTCCATTGTAAAAATGTATTAATATTAGGCCACAAGACCACAGCAGAA--------------------AAAAATGCTGCTCATTTGCAAAGCAGTGATGTGGTGCAGAAACAACTTGAGTTCAGGGAGCCAAAATGTACACCATTCTTTCTGGAATGAGTAGAGAGTTTCT chr4 - 94230402 40754005 40754004 40754546 53475857 53475856 53476398 542 AGAATTACTCTACACCCTTTTCTGGATTTCCCCCAACAGCCTAAGTATTTCCTTCAGAG----------GATATGTGCTCCCACCCGTTGAACAGCACTATCTGATACTGTATTTTATGTTTTACTG---TTCTGCAACTTTCATTTGATCTGAAAA-------------------GAGATGAGGTGAAACATTTGCTACTAAAAGTTTTCACTTAGAGTAAAATCACATGTTTCCCCTTGTTGCTCATATTCATGCATGGTGCATTAAAATTGACTCCCATAAGTCTTCATTATTCAGGCATTTAATCATATGGAAAATGTGGTAATTTAATTAAAACAAGCAACATAGGTTAGATATCCCACGGGAAACAGAGTGAGGAAAAATAATCTAATTCACTGAATTTCCATTTTGAAAATGTATTAATATGAGACCACAAGACCACAGCaaaaaaaaaaaaaaagaaagaaagaaaaaaGTTGCTCATTTGTAAAACAGTAATCCGATGCTGAGACAATTTCAGTTTAGGAAGCCAAAACTTACACTGCTCTGTCTCATGTCTGCAGTGAGTGTTT ..x...:x:.:.:....x-----.:..:...x:.x.:.x..:..:-:.:.:...:...:----------...:.x:x:...:.::.:....:::x....::xx..x:x.x:...::x.:x..:x...---.x...x....:.x....xx....:::.-------------------.:..x...........x.......x....:x...:.....::.........:......:..::::...x.......x.:.:................x.x..:..........:.........x..........:.:.....:.......................:............x......x:....x...:.x:x...-.....:.......:..:..::........x.:...............x..:................:..--------------------.....x.:..........:...:....:..x:.:...x..:....:..x....:...:........:x.....:::...x...x:x:.xx.:..x....x.:. 18M5I22M1I13M10D58M3D27M19D204M1I70M20I103M 380/515 73.8% 542/94230402 0.0% 59/515 11.5% 86217389 NA +3643 chr4 + 190214555 126988402 126988401 126988476 75 CTGCAACCTCCAACTCCTGAGTTAAAGTGATTCTTCTGCCTCAGGCTCTTGAGTAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:..:..:xx.:..:...:...x.....x...x:xx.x.....x..:.::.........:......x....... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 108791276 81423279 +3053 chr4 + 190214555 126988491 126988490 126988551 61 TATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATTTTTTAGTACAGACAGGGTTTCACCAT chr4 - 94230402 20639430 20639429 20639490 73590913 73590912 73590973 61 TATTTTCTTTTTTTGTTTGTTTTTTTTTTACCATGTTTAAATACAAGTAGACATTTACCAT ......:.......x...x..........xx...x...x.:....:::..:xx..:..... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 106349061 83865494 +3566 chr4 + 190214555 127001807 127001806 127001945 139 GAGAGAAAGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGGAGAAAGGAAAGGAAAGGAAAGAAAAAGGAGAAGGAAAGAAAGGAAAGGAAAGAAGAGGAAAGGAGAGGAGAGGAAAG--------GAAAGAAAAGGATAGGACAGGAA chr4 - 94230402 40840949 40840948 40841095 53389308 53389307 53389454 147 GGGGGGAAGGAGTTATGAAAAAGGAGGCATAAGACAAGGAAATAGGGAAGAAGATAAAAGTGAATTAAGAAGTAAGGACAGTAAAGGAAAGAGCATTAGTAGAGAGACACTGTTAGTACGCCATGAGGGGAAAAGATGGGATAGGAA .:.:.:...:.:xx:x:.::.....::x:x...:x.....:.x...:...:.:.x:....x:..xx:.....x..:..x..x..........:x.xx.:x:.....:x:xx.xx..--------..::.:...:...:...:..... 116M8I23M 84/139 60.4% 147/94230402 0.0% 8/139 5.8% 86160858 NA +3460 chr4 + 190214555 127001814 127001813 127001935 122 AGAAAAAGAAAGGAAGGAAAGGAAAGGAAAGG---AGAAAGGAAAGGAAAGGAAA-GAAAAAGGAGAAGGAAAGAAAGGAAAGGAAAGAAGAGGAAAGGAGAGGAGAGGAAAGGAAAGAAAAGGAT chr4 - 94230402 18943159 18943158 18943284 75287119 75287118 75287244 126 AGGAAAAAGGAGGAATTAAAGAAAAATGAAAATACAGTGAGGTGAAGTAAGGAGACGAAAAAGGCAAAATAGAATAAGCACATTAAAATGAGAGGACTGAGAGCAAAGGAAAGGGAAGAAAAATAT ..:....:::.....xx....:...:x:..::---..x:...x:.:.x.....:.-........x:..:x.:.:x...x.x.xx...:x::::.:.xx.....x.:........:.......:x.. 32M3I20M1I70M 78/122 63.9% 126/94230402 0.0% 4/122 3.3% 108058655 82155900 +3401 chr4 + 190214555 127001842 127001841 127001950 109 AAGGAGAAAGGAAA-------GGAAAGGAAAGAAAAAGGAGAAGG------AAAGAAAGGAAAGGAAAGAAGAGGAAAGGAGAGGAGAGGAAAGGAAAGAAAAGGATAGGACAGGAAAGGAA chr4 - 94230402 12301138 12301137 12301259 81929144 81929143 81929265 122 AAGCAGAAAAGAAGTTTTGCTAAAAGGGAGAGTAATATGAGCAAATAGCTAAAAGAGAAACAAGTAAAGATGAGGAAAGGAGAGAGGAGATAGGATCTGGCATGGAGAGGACAAAAAAGGGA ...x.....:...:-------::..:...:..x..x.x...x.::------.....:.::x...x.....x.............::...:x.:.:xxx.:x.x...x......::.....:. 14M7I24M6I71M 74/109 67.9% 122/94230402 0.0% 13/109 11.9% 114700704 75513851 +34805 chr4 + 190214555 127015656 127015655 127016451 796 AAACTGGATATTGGCGTTACAGATGCCAAAACACAGTCAGAAAGATTAGCTTTCAGCTCCAGCCCTGCTGAGGAAGTTCCCTGAAGGATGAAAGAGGCCTCGAACAAAGTGAGATGCTTTAGCTGATCAAGCCCTATTTGGTCACTTTCATCTTTGCGATGCATGGAAAAGGAGCTGCTTTCCTGCCAGCTCTTGGCACTGTGACCAGGCAGAGACATAAAGGGAGGCAAGGCAAGGCCAGCACAAAAGGGGAAGTGGTTAAAGGCAGCAGCCCATTCCAAAGAAACAAAGGTGCTGGCAGGAGACGTTAACAAGGAAGACGCTTGAGCCTCCATGGTAAATAGAATGGCAATGGCCTAATAATAAACCTGAAAGACACAAGTGAGGATGGTTGCATGCAAAGTGGAGGGAAACCTTCCAATTACTGCTGTAGACAGCCCTATTAATCCTTAGGAGCACTCCCGACAAAAAGTCTATTCAATTTTCCCTCGATGTGTTCCATCTAATGGGAGCAGTATTATGTCTGACACTGAGGGTAATTACCTCATGAGAATTTCACATAC-AGAGAAGTAAAGTCTTTAATTTTCTGCAGGTGTCTTGAGCACATTCTGCAT-AATTCTTTGCCCCAAAATGAGGTGCGCATTCCTCTTCTGCAGAGCTGCTT-TCGGATTGGGATGGCTTGCATTTGAGGACTATAAGTAATAGTCATTTATCTTAGCCATT--ATGGAAAGCAGCGCATAGTATATTCTCCCTTCATCACATTACAAATGTCATTAGTAACTTCAGCAAAGCTGAA chr4 - 94230402 40767003 40767002 40767787 53462616 53462615 53463400 785 AAACTGGATATTTGTGGCTCAAATGCCAGAACAAAGTCAGAAAGATTAACTTGCAGCTCCATCTCCACAGAGGAAGTTCCCTAAAGGATAAAAGAGCAGCTGAACAAAGTGCAATGCTG-AACTGATCAGACTC-ACTTTGTCACTTTCATCTTTGCAGCATACAGAAAAGAAGGGACTTCCGCGCCAGGCCTTGGCACAGAAACCAGGAATCTAAGGAAAAGAAGTCA-GGCAGGCCAAGGACAAAAGTGGAAGCCTTTCAAGGCAGCAGCCAACTCTGCAGAAACAAAGCAGCTGGCGGGATATGATGACAGGGAAGAAGCCTGTGTCTGTCTGCTGGATAGAACAGCGGCAGTATACTCATGAACTGGAAAAGGTATGGAGAGAATAGTAGCA----AAGCGGGAGAAAGCACCCCTATTACAGCTTTTGACAGCGCTATTAATTCTCCAAGGCATTCCTGACAAGATGCCTATTCAATTTTCACTCCATGCGTTCCACCTAATGGGAGCTGTATTATGTTTCGCACTGACTGTAATTACCTCTTGAAAATGTTGTGTACAAGGGGAGTAACAGCTTTAATTTTCTGCAGGTGTCTTGGACACATTCCTTAGAAATTCTTTGACCTAAAATGAGGTGTGCATTCCTGTTCTACAGGGCTCCTTCTCAAATCAGGATGGTTTATATTTGAGGGC--CAAGCTGGAGCCATTTATTTCATCCATTAAATGGAGA----CACATAATATATTCTACCATCACCACAACATAAA---CAATAACTGCTCGAGTGAAACTGAA ............x.:.x:x..:......:....x..............:...x........x.:.::.x.............:......:......xxx::..........x:.....x-.:.......::.:.-.:..x.................:::::.::......:..xx:...:.x:.....x:........x.x:......x.xxx.x:x...:.:..x..-....:.x.x..x.......x.....:xx..x............x.:..::x..........xx......:...x.:.x.:...:......x..:..x.:..x:x..x.::......::..::::.:x..x.x..:...:x....::xxxx:.x...:..:..x...----...:..::.:..:.x::..x.....x...x.x......x........:..:x:::...:...:.....:.x.:.............x...x...:......:...........x.........:.x:......xx...........x...:...x.::::...-..:.:.....x:x........................::.......:x:.x-.........x..:...........:........x....:...:...x...-..::..::......:..::........:.--:...:x:x..:.......:.:.x.....--.....:.----.:....:........x..x...:....x:.:...---..x..::x:..:x..::..:..... 119M1D14M1D94M1D166M4D163M1I51M1I50M1I29M2D28M2I7M4D34M3D25M 569/780 72.9% 785/94230402 0.0% 21/780 2.7% 86248653 NA +9035 chr4 + 190214555 127103643 127103642 127104162 520 TTTTTTCTCTCACATGAGCTTAGCTTTGACTTTGCCAAAAAAGTGGGCCTTTTGC---------CTCTAAAAACA--ACAAGTGGTTGTATTCTGCATATTCTCTTCTTTCCTTGATGACACCCCTGATTGCATCTAACCTGCCAGCAGAGCTGGACTGGAAACAAGAGCTTTCATTTGGCCATGAGAACAAAGA-ACAATTGTTTCTGTTAAGCAGTGAAGTTTCTAATGCAGCCAGAGATTACAGAATAGAATCCTCATAAGGGAAGAAGAAAAAAATTCCCCATCACGTCAGCACTGTCAGTGACCAAAGCCATACGC-CAATGTATGACCTATGGCCCTCAAAGCAGAGGAATATTTCTTCCTCTATAAAGTGAGTGTTATTTGATTAAATGAATGTTTCTCTAATAAATAGCATACTTAAGGTCTTTCAAAAACCTCAGAACAACCGTCTTATCTGGAGCCAAATAAAAGATATATTGGCAAAAACAAAACTTTCATCCAAATTAATAATGTCTTTATATATCCCTGT chr4 - 94230402 40797252 40797251 40797724 53432679 53432678 53433151 473 TTTCTGTTCCCCCATG--CCTGTCCTCACCCCTGCCAGAA------TCATTTTGCTTCCCTAGACTCCAAAAACATTCCCAATCTATGTACTCTGCATATTCATAGCACCTCTAGATAATACCCCTAATTGC--------TGCC--TCTAATTGGCATCAAAATAAGAACTT-CATTTGTCTCTATATACAAAAATGGAACTATTT---------------ATTTCAAATGCTGATATGTGCTGGAAAAAATAATTTACGCAAAGAAATAAAA---------TCCATTATGTCAGCACTATCACTTTTTGAAACCATATGAACAGTGTGTTGC-TGTCTCCTTCAAAGTAGGGAAATATCTTTTCTACCATAAAGTGAGTGTTATTTGATGAAAGAAATGCTTTACTAGCTAATGG-ATAATAAAGTATTTTCAGCAATGCC----------TCTCATCTACAGCCAAATGGAGGACA----AGCAAAAGGCAATTGCTTCTTCAGTGAAAAAAAGTCTTTG-ATATTCCTGT ...:.x:..:.x....--.:.:x.:.::x.::.....:..------x.x......---------...:.......--x.x.:.xxx....:...........x:xx.x:::..x...:.:......:.....--------....--:xx.::...xx.x:...:....:...-......x.:x.:x:x.....:.-:x..:.:...---------------:....x.....x.x:.x:x::.:x.:..x.x...::x.::..:.:..x..:.---------:....:.:.........:...x.xx:::..:.....:.x-..:...:.x:.-.:.xx..:......:..:.:.....:.:...:x.:.....................x...x:....:..:x...::x...:.-...x.x...xx:.....:x..:x:.----------...:....:x........::.:..:.----:......:xx..x:x:.:x.:..:xxx..x..x......:-....:..... 16M2D22M6D9M9I11M2I55M8D4M2D26M1D22M1I10M15D52M9D39M1I11M1D82M1D25M10D26M4D40M1D10M 301/460 65.4% 473/94230402 0.0% 73/460 15.9% 86306391 NA +3035 chr4 + 190214555 127145564 127145563 127145619 56 CATTTACAATTGGCTTTCCATTGCCAAAAATTAACAATAATAAAATATCTACACCA chr4 - 94230402 18477813 18477812 18477868 75752535 75752534 75752590 56 CATTCACAATTCATTTTTCATTAGCAAAAATTTACAATAATAAAAAACCTGAAACA ....:......x::...:....:x........x............x.:..:x.x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 108667751 81546804 +18949 chr4 + 190214555 127194882 127194881 127195807 926 ATCTCTCCACCCCATTCCTCTCACGGACTTAGTTTTTAAACATAAGCATGAATAGGATAAAGAACTGATTTATCTGATGAATTACTTTATCTGTCTGTCCCATGCAACCACTTCATTATGGTGTCTTAAACTTGTCAAAGATAAGCTTAATACATTGC----AGCAAACTCATTCTTTGCTGACAGTGGGGTAAAA-TTTAGCTCCACAGGTCTTGCTATTGATAATTGTGG---TATTCTTGTTAGATGCAGGTCCAAGAGATATCTAAA-CTTCTTTTCATCAGCATAAAACTCAAGTGA-GCCTTTTTTCTTTTTTCTTTTTATTTATTATTATTATTATTTCAGCATCCTGCAAGAAACTTAAAATTCCATAGTTTTTCAAAGAGATCATCAGAAAGGTTTTCAAGTCGGGATTTTCTTTTTCTGAAAAATTTTAGTAC-------AGATAGCCAGCTGGAAACTATTGATGGTTTCTCTG--TATGCAAGTTAGGGAGGGA--------AAAAGCAGGGGCTTAAAGG------AGAGGAATGTAGTATCA------------------GGACCTCAACCTCCATATGTTTTTCCCCAAATGTAATTGTTTTACTATGCAGTAACATTTGCAAATGAATGTAAAATTGCCTACAAGACAGAATAGGTCAGAGAAGGCAATTTTATGGTTCTT-TTTTCATTGGCATCTAAAGCAAGCTAAAACTCTTTATGACTTCATCCCAAATTTGTTCTCATAACGAGGTATTTTTTTATTTTATTTTGCTACCTTGGAAAATACATCTTAAGACAATTGATGTTGCAATATTCCATCCATTGCAAATTATTGCTAGATCAAGCAATACTTCTGTCAACCT-----AAACACCAGATAAGACGAATTACACATAAGAGTTTTGAAATGTATACTTTGAA-GAAGACTCAAAAAAGATCGTAACTTCAATTATTACTCTCCTGCTAA chr4 - 94230402 40821559 40821558 40822470 53407933 53407932 53408844 912 ATCTTTTCTCCCCCTCCCTTT----GGCCTGTTTCTTAGCTACAAGGATGAACAGACTAAAACACAGATTTATTTGAT----TACTTCA---GCCTTTCCCATGCAACAGCCACATTATTGTGCCTTACACTTGTCAGGAGAAAGCACAGTACAGTGCCAGTATCTGGCACACGCATTGCTGTCACGGAGGTAAAAGTTTAGCTGCACAGGTCTTGCACTTTGTAATTGTGGGACTGCTATTGTTAGACACAGGTCCCAGAGAAAGCCAAAACATGCTGTCAT-AGCA---AAGTCTGGCACTGCCATATTGATTTTTAGGTCTTGCTGAATAAGATTC----------------------------AGTTTCAGTCTTTATCAAAGAAAATGCTACATGTTCATTTTAATTGTTAGCTTTTGTTTGTCATCCCTCCCAGCACTACTTCTAAATAGCCATCTGAAAAGCATTTCTGGGCTCTTTGGGTATATATGTTAGGGTTGGAGGGTCCATAGGGGAAGAGGGCTAAGAACCAGATAGCGGGAAGCTGGATCAAGTCAAGATTCTTAAGGGGGGCCTCCATTTCCATATGCGTTCCACCAAACATAATTGCTTTATTGCAGATTGACTTCTGTAAATGACT--AAGACCACCTGTGAGACAG--TAGGTCAGAGAAGGCAATTTTGCAGCTTTTGTTTTCATTGGCAATTGCAGAAGGTTAAAGCACTTTATGACTTCATTCTAAATTTGCTATCATAACAAGTTATTTTTGTA-------TGGCTACCTTGGAAAA-ATACCTTAGAAGAA----------AGCTTTCTCTGCACAGAAATTTC-------ATAAAACCACATTACTTACTACCTAATGAAAGAAAAGGCTATGAGAACTTAAACTAAGCAGTCTTCACATACATGCTGTGAATGACGCTCCAAGAGATGTTGTACAGCTGATCATTCTCTTTCAGTTAA ....:.:.x....x.:...:.----.:.:.:x..:...:x:.:...x.....:..:x....:x..x.......:....----.....:.---.:..x...........x:.:x......x...:....x........::::x....x:.:....x...----.x.x::.x..:x.x......x..xx.:.......-.......x............xx..x:.........---.::.x........::.......x.....x.x.:...-.x.x:.x....-....---..x..x:.::x-...x.x..xx.....xxx.:..::.x.x..xx...x----------------------------.:..:..xxx...x.......:.x::::.x.x:xx:x..:x.:.:.xx.x:..:.x...x.x.xxxx.:::..:..-------.:.......x...:...x:...xx...x:...:..--...::.x.......xx...--------.:::.x..:..x:...:::------..x..:.x.:x.x....------------------..:....x.::........:x..:.x.....::......:....:.:::x.x.:..x.:..:......x.--..:.:::...:::......--.....................:::.:.:..-............x:.:x..x.:.:....:.x..............:.:.......:.x.......:..x.......x..-------.x..............-.:.:....::.x..----------.::x...:x.x..:x.x..x..x-------..x..:.x.:.:.x..xx.x....-----..:x.xx:.x..x..x:.x...x..xx.:x...:..x.x..::..:..x....-..x.x::...:.:.x:.:...xxx:::..:...x:::.:.x.:... 21M4D53M4D7M3D66M4I34M1I35M3I36M1I11M1D4M3D11M1I36M28D76M7I35M2I19M8I19M6I17M18I70M2D19M2D30M1I79M7D16M1D14M10D23M7D24M5I53M1I46M 570/854 66.7% 912/94230402 0.0% 130/854 15.2% 86373323 NA +11465 chr4 + 190214555 127212341 127212340 127212625 285 TTGCTCTCTAGTCACGTGGATCTGAAATTACTAACAGATACATAACTCCAGACTTGATCTCATTTCTTGCCTGGCTTTGCTTTT-AACTCTGTACATCCATGCTGAGGATTCAAGCTGCTTCCCCAGTTCATAACAAGCTCTTTTCAGAGACAAGTCTCCCAGCTTCCAGTTGCCTGTATTAATGAGAAGCATGAGTTTCAAATCAAAGCTTCAAAAGAATAATTTTCTTGGAACATTATCCTGTAATGGGTTTCTAATACAGCCTTCCTCTGGGGTATCTCTATA chr4 - 94230402 40824809 40824808 40825086 53405317 53405316 53405594 278 TTTTTCTGAAATCTTGTGGCTCAGAAATTACTAACAGATACTCAGTTTCAGC----GTCTCCTTTCTTTTCTGACTTTGCTTTTTAACCCTACACACCCATGCAATGGATTCACACTGCTTGCCAACT--AACACGAACCTTTGCCTGTGACAGATCTCAACACACCCTGCAGCTCATGTTAATGAAAAACATAAGTTTCAAATCAAGGCATCAAAAGAACAATTTTCTCAGAACATTATCCTCTAAGGGGTCTATAACGCAGCTTCCCCT--GTGTGTTTCAATA ..x:...xx.:..x:....x..x..................x:.::.:...x----:....x......x:...:..........-...:..::...:......x:x.......x:......x..x.x.--.xx..:.:.::..x:.x.x....::....xxx:.x:..x.:x..:::.:.......:..:...:.............:..x.........:........::............x...x....:.x...::....:.:..::--.x..:.:..x... 52M4D28M1I43M2D141M2D13M 198/277 71.5% 278/94230402 0.0% 9/277 3.2% 86387532 NA +3154 chr4 + 190214555 127220486 127220485 127220547 62 TAGAATAGTATTTCATTGTATATATATATATATATATATACACACACACACACACATATATA chr4 - 94230402 21704648 21704647 21704709 72525694 72525693 72525755 62 TATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ..x.:..:x......:.:x.x.xx:x.........:..:................:.:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 105515838 84698717 +3154 chr4 + 190214555 127220486 127220485 127220547 62 TAGAATAGTATTTCATTGTATATATATATATATATATATACACACACACACACACATATATA chr4 - 94230402 21701075 21701074 21701136 72529267 72529266 72529328 62 TATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATA ..x.:..:x......:.:x.x.xx:x.........:..:................:.:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 105519411 84695144 +3236 chr4 + 190214555 127220486 127220485 127220541 56 TAGAATAGTATTTCATTGTATATATATATATATATATATACACACACACACACACA chr4 - 94230402 91528823 91528822 91528878 2701525 2701524 2701580 56 TAAAATAGCATTTCAATGTAGATATATATAGACAGATATACACACACAAAAGAACA ..:.....:......x....x.........x.:.x.............x.x:x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 35691663 NA +8094 chr4 + 190214555 127229831 127229830 127230091 261 ATACTTTCAGAATCATATTAGTT--TTATAAAACTCTATTTTCTCCACCTCCAAATCTTCCTTTCCCCACCTT------AAATCAATCCACTCCAGGTCTTTGGGGACTGCCAATTTGGAACAT-CCTCTGGCTTTGACAATTGGCAGCTGGGATCAATCAGTTCATAAAATCCATCTTGTCAGCTA-AAACAAGTCATATTTCTTAAGCAAGACAATCTGTTAAACAG-CTTAGGTCTTAAATCCATGAAAAACATTTGCAAAAACACATT chr4 - 94230402 40828413 40828412 40828682 53401721 53401720 53401990 270 ATACTTCGAAAGTCACGGTAACTGATCTGAAAACTGT-TTCCCTTTCCATTCTCATGCCCCATTCCCTCCCTCCTTTCCAGAACAACCTATGCAAGTATGAAGGGGACTGCCAATACAGAACATACCCCTAACCTTGGCATCTAGCAGCTGTGATTAATCACTTCACAAAATCCTGCATGCCAGCTAGAAGCCAGTTGTGTTTCTTAAGCAAGTCAATCTGCTCAACAGTTTTAAGTCATTACTCCATTCAAAACA-GTACAAAAACAAATT ......:x.:.:...::x..::.--.:xx......x.-..::..::x.x.:.xx..x::..x.....:x...:------.:.x...:.:.:x.x..xx:xxx.............x::......-..:..::.:...:..x:.:.......x...:.....x....:.......xx.x..:......-..:.x...::.:.............x.......:.x.....-:...:...x.x.x.....xx......-x.:........x... 23M2I12M1D35M6I45M1I62M1I41M1I26M1D15M 180/259 69.5% 270/94230402 0.0% 13/259 5.0% 86401418 NA +3095 chr4 + 190214555 127245063 127245062 127245124 62 TGTATATATATATATATATATATATATATATATATATATATATACACACACACACACACATA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x.:..:...x..:....:...::x..:..xx...:.:.............x...:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 118849262 71365293 +3195 chr4 + 190214555 127245063 127245062 127245125 63 TGTATATATATATATATATATATATATATATATATATATATATACACACACACACACACATAC chr4 - 94230402 8395799 8395798 8395861 85834542 85834541 85834604 63 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ...::...x.:..:...x..:....:...::x..:..xx...:...............x.:.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 118849264 71365291 +3477 chr4 + 190214555 127245063 127245062 127245138 76 TGTATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACCCACAATGGAATA chr4 - 94230402 8395797 8395796 8395870 85834533 85834532 85834606 74 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGA--CACAAATGAATA ...:.::...x.:..:...x..:....:...::x..:..xx...................x.--.....xx..... 62M2D12M 56/74 75.7% 74/94230402 0.0% 2/74 2.7% 118849266 71365289 +3339 chr4 + 190214555 127251974 127251973 127252094 121 TATATATTACTCTATATATATGTATTTCTGTGTATATGTATTTCTATATATATGTATGTATGTGTGTGTGTGTGTGTGTATATATATATATGTCT-GTGTGTGTATTTCTGTATGCTGGGCT chr4 - 94230402 19559236 19559235 19559357 74671046 74671045 74671167 122 TGTAACTTATTTAACTTATTCCTTCTTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtggtgggtt .:..xx...:.:x.:x...x:x.x:.....::.x.x.:xx...:.x..xx...x.x.x.x...............:.:............::x..-:.x.x.....x.::x.:..x....:. 95M1I26M 78/121 64.5% 122/94230402 0.0% 1/121 0.8% 107692738 82521817 +3039 chr4 + 190214555 127252010 127252009 127252060 51 TGTATTTCTATATATATGTATGTATGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ....xx...:......::::...:...:....x.x................ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 79162513 NA +3049 chr4 + 190214555 127252020 127252019 127252067 48 TATATATGTATGTATGTGTGTGTGTGTGTGTGTATATATATATATGTC chr4 - 94230402 4406428 4406427 4406475 89823928 89823927 89823975 48 TATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGTC .......:xx.:..x....................x:.......x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 122845592 67368963 +3135 chr4 + 190214555 127258039 127258038 127258103 65 TAAAGACACACACACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAATGTTCTTGGACTTCTAAG chr4 - 94230402 67652090 67652089 67652150 26578253 26578252 26578313 61 TACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA----ATTAGATTGCCAAG ..x.....:...:..x:.:.:.:.:......................----x..:..:.x.:... 47M4D14M 47/61 77.0% 61/94230402 0.0% 4/61 6.6% 59605949 NA +3588 chr4 + 190214555 127284088 127284087 127284158 71 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTACCAAGTAGCTGGGATTACAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx:x..:.::..........x...x..x.x........x:...........:.:....x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 109086962 81127593 +3021 chr4 + 190214555 127286544 127286543 127286610 67 ATGTACCCTAAAACTTAAAGTATAATTAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAGAAATAGAAA chr4 - 94230402 49177699 49177698 49177765 45052638 45052637 45052704 67 ATATATTCTGAAACTGCTCATATGATTAAAAAAAAAAAACATCTGGGAAAAAAGAAAGAAAAAAAAA ..:..::..:.....xxxx:...:...............x.xxx.::......:.......x.:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 78108845 NA +3064 chr4 + 190214555 127288186 127288185 127288238 53 CACACACACACACACACACAAACACACACACAACCACCACCACCACAAGTGCC chr4 - 94230402 26758206 26758205 26758258 67472145 67472144 67472197 53 CACACTCACACGCACACACAAATGCATGCACACCCATCACCCCTGCGAGCACC .....x.....:..........::..::....x...:....x.::.:..::.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 100529980 89684575 +32144 chr4 + 190214555 127307554 127307553 127308408 855 CACACAAATAAATCATTGTTTAATCATTCTCATCTGCCTGCAGAGAAAATTCAACATATCTAACCTGTCTTAATTAGACTGCCAAT-AAACAAAAAATTGATGCCCTAGAGCGGAAAAATTGGAGCTCAGAAGAATAA--ATGTGTTATTTCAAACTAAATGAAGCGTAAACCATTTAGTTTGGTCAATATCTCTTCATACATCTGTCTATGGCTAAATTTTCCAGAAAGTAATAAACAGCCACTGAAATAGCTTTGCATTCAGAGATGTCTGGCTCAGAAGGCTATGATGTAGCCCCTTAGGTAAGTTCAGGTTTGACATGGTTTAGGAAGATCAGGTCCTCAGGAGCTTGTTGCAGTGGCTGATATCTT----------------------------------------TCCACAGTCCCAGCAGCTAGAGAGGACTCCATCCTTTAGTGCCCAACTCCAATCCAGGCAGCTGAGCTTGTGCTGCTGAATTCCACTAAGAAAACACAGGGAAGGGGCCCCAAGACTCACAGACATAATATAAATAAAAAAAATAATAATAATACACTCATGGTTCTAACTGTCCACACATTCTCAGTTAGGTTGCACCTATGTTATATTACTCAGCATGTGGTTTCAATTGTGACAACAATGCTCATTTGTTCAAGAGTATGCTGGCTGTTAACTTCACTTCTTACTGTGTTTAAATATGCCATGGCCTGTGACTCGCTTTTAGGGGTCAAGTGTCTGGCATGTGCCTGCTAT-GTTATGGTCGGTATAATCCTCTAGATTATCCTAGCTGCAGAATCAGAACCTTTGATGTCAAAAAGGC-CTCTGTATATGTAATAGGTACATAGTGTAT------------ATATACGGAACAAGAAGAAAGGCATAAAGTGGAAAA chr4 - 94230402 40846504 40846503 40847391 53383012 53383011 53383899 888 CACACCATTAAAT--TCACCTTATCTTGTTTATC---CCAAAGAGAAAGTTCAATGCGTTTAACTCCTGTTCATTTCATTTTTTATGAAACAAGGAACTACTGGACTGACTTTGTAA-------GCTGGGAGGAATGAGAATACAGTATTTCAAAGTCAGCAAAGCTTGAAAAGTTTAGTTTTTTGGAGATTGTTCCAAACAACTGTATGTGGCTAAGTTTTCCAAAAAGTAACAAACAGTCAGTGAAATGAGTTTGTATTTAGATACACTTGGCTTAGAAGGCTGTGGTTTAGCCCCATAGGTAAGCTCAAATTTGACATGGGTTAAAATAAAATAGTCCTTGGCGAACAGTCACAGTAACTGAAATCTTGCTCTTGGAGGACTGGTTAAAAGGATCCAGACTCAATTCTTCCCTAGTCATTGCAGCTGGAACAGACCTGGTGCGTCAGTGCCCAGCTCCA-TCAATCCAGCATGTTTGATGTGCCTGAGTTTCACTAAGAAAACAAAGTTAGGGAGCCCTGAGACACACAGACATAACATAAATAAAAAAAATA---------CATTCACATTTCCAACTGTCCACACATTCACAAGAACGTTGCACCTATGTTATATTAATCAGCATGTGGTTTCAATTTTAACAACAATGCACATTTGTTCAACTGCATGCTGGCTGCTAACTACACTACTAGCTGTGTTTAAATACAGCACAGCATACAACTGCCTTCCAGGGGTCAAGTGTCTAGCGTGCTCCTGCTATGGTTACGGTCGGTATAATC--TTAGATTACCCAAGCAACAGACCCACACCCTTTGATGTCATGAAGGCGTTATGTATATACAGTATACATACACTGTGTGTTCTTTGCAAGGTAGAAGGTACAAGAAAGAGGGTGCCAGGGGAAAAA .....x.x.....--.::::.x...x.x:.:...---.::x.......:.....::::.:....::x.x..x...xx.:.x::x..-......::..:.:x..xx..::xx:x.x..-------...x:..:....:.--..:::x.........x.x.:::....x.:..xx:........xx.x:.x..:x:.:..x...x....x.:.......:.......:.......:......:..x......::x....:...:...x.::::.....:........:..:.x.......x........:...::..........x...::.x:.xxx:.....::.x::x:x..::....::....x.....----------------------------------------...x:....x:x......:..:x:...::x:.x.x.:........:.....-..x.xx....xx:x:.x:..:xx....:..:.............x..xx.:..:....::....x...........:................---------..:...::x...:................x..:xx.x....................x...................x.:..........x...........xx.:..........:.....x....x..x:.............::x..::..x.:::...xx...::...............:..:..:x........-....:.............--:.......:..x...x:....x:..x.x............x:.....-:.x.......::.:..x::.:.:.x...:.------------:..x.x..x.......::.:..:::x.:.x.:.... 13M2D19M3D49M1I30M7D14M2I231M40I51M1D93M9D200M1I18M2D47M1I30M12I36M 591/831 71.1% 888/94230402 0.0% 81/831 9.7% 86461050 NA +14502 chr4 + 190214555 127327954 127327953 127328494 541 TCTCACTCTTCATCTTATCAAACAGCACCCTGTCCATATTCTGGGGTCCCTGTCCCTGACAGAGGCAGCACATTGTTGGGAAGTGTTTGCCTTAGCATTTG----CAGGCATTGTGCTGGGATGAGGTATCAGATGACAGGCTTTCATCTGGATATGATTTATTTATTATATCAGTACTTTATATTAGAGAAAGTGCACCAGTGTGAAAATTGAAGGGGAAACCTATTTTGGCTACGGGATAACCTGGAAATTATTAAAGTCAAAAGCTTCTGGGTCAAAGGGTAGCAGCTTCATGTTATTAGAATAATATGTTAATATTTAAGTCCTATAACCTCTTTGGG-CCTTTGAAACACCTGTGATGAAAATGGTTTTCACACTGTTAAAATGGTAA-----CAAATAGATGGAGGCTCATTGCTTTAGTTTTGAATCTATTCGTGTGACTAAATTTTATGAGCCAATAAAACATATCCTAACATAAGTACAAAAAGATTCAGTAAA-ATAACATCCTGCCAATTTT----------------TTTTTGCAACTCTGCTTTCTCTCTTTTTA chr4 - 94230402 40855233 40855232 40855782 53374621 53374620 53375170 550 TTCCATTTCTCCTTCTATCAAGCGTTGCTTCAGCCCTCCATCTAGGTCCCTGTCCTCCACATAGATAGCACAACATAGAGTATCATTTACTTTGCCATTTGATATCAGGA---GCCCTGGGATGATGTATCAAATGGAAAGCCTTCATGTGGTTATAATTTATTCATTATATCACTCCTTCATATTAAAGAAAAGGCAATGGTGTTAAGTATGAACAGAAAACACATTTTTGCTATTGAATAACCTGGAAATTATTAAAGTTAGAAGGTCTTGAGTCAGATGG-AGAAGCATCATATTGTCACAGTAATACATTAATGTTTCAGCCATGCAGACTCCATAGGTCTTTTGAAACACTTGTGGAAATAAGTTATGTGCTATTATTACAACTCTAACACACCAAACCAACTCAGTTTAATTG-TTCAG---------TAAACACACAATTGAGTTTTATGAG---ATAAAA-ACATCCTGATGTAAATATAATACTTTGTACAAAATATTACATCAAGTCTATTTTCAACAACTGATTCCTATTATTTCTTCTCTGTATTTCCGCTCTTTA .::..:.::..x.::......:.:x::.::::x..x.x:x::x:...........::x...x..::......x::.x.:.x.x::...:.:..:x......----....x---.:x.........x......:...:x.:..:.....x...x...:.......:.........x.x...:......:.....:x...x::....x..:xx....x:.:....x:.....x....:x.:......................:.:...x.::..:....:.x..-..x...x....:..:.:.x.:.....::.....:...x..:.x.::.:x...:x.:..-.:..........:....:x:.x..xxxx.x.xx:.:.:...x..:xx...-----....:x:.:xx..x:.x....-..:..---------..xx.:::::.:.:.:.........---......-.:.....:.::...:..:..x.xxx.x:.xx...-..x.....xx.:.x.....----------------..x..x.xx.....:x..::.x..:.... 101M4I5M3D170M1D58M1I50M5I21M1D5M9D25M3D6M1D34M1I19M16I29M 346/523 66.2% 550/94230402 0.0% 45/523 8.6% 86472721 NA +3070 chr4 + 190214555 127343250 127343249 127343327 78 ATACACATATGTATACACACATGTTATACACATATGTATACACACATATATACACGTGTATATACACATACACACACA chr4 - 94230402 10913773 10913772 10913850 83316553 83316552 83316630 78 ATACACATATCTGTCCAGATTCCTTATGTATGTATGTGTACATAAACATATACACACACATACCCTCATCCACTCCCA ..........x.:.x..x.:x:x....::.::.....:....:.x.:........::::...:x.x...x...x.x.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 116429477 73785078 +3424 chr4 + 190214555 127343274 127343273 127343360 87 TATACACATATGTATACACACATATATACACGTGTATATACACATACACACACATATATACACGTGTATATACACATACACACACAC chr4 - 94230402 89016085 89016084 89016171 5214232 5214231 5214318 87 TGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACAC .::......x..:..:......:.::.x::..:::.:.:.::..x.::..:...::..x.:::....::.x....x.:.:....... 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 38327189 NA +10527 chr4 + 190214555 127344363 127344362 127344674 312 GTAAAATTCTAGCCCATCGCTTTTAATCAGTTATAA-----ATTAAGGAAATATAAAA-GCATAATACCACAGCAACCAGA--GTCAAAAAATTGTATCGTCATTCAAAGAAAAAGGGAGAATCACCTCCAAAATGGCTACTCCTGGCTCCCAAAAATTAACCACAGCTGTTGATGAAAACTAGACCAACTCCACAGGAAAACCACAAAGTTGGCAACTAAAAAAGATTAATATGTCTCCTGGAACAACTTTCAATCATGGTCCTTCAAGAA-CTCAAGGCCAAAGCTAACATACCATCTCTCCTCAGCAAAAACTTCATC chr4 - 94230402 40862544 40862543 40862853 53367550 53367549 53367859 310 GTACAGGCTTGGCTCACAACCATTAATCAGCTCTCAGAGACATAATCAAAACTTACAATGGAAACCACTGCACCAACCAGACAGCCAAAAATCCCCACTAGCATTGAAAAACACA-----------CCCAAAAATGGCTATCTCTGGCTCCTGAAAATTAACCACAGCTGTTGCTAAAAACTAGTTCAGTTCCACAGGAAACCCACAGAACTGGCAACTTGAAAACAGTAACAAGCTTCCCTGAGCAACTTTTAATCCTGATTCCTCAAGAAGCACAGAGCCAAAGCGGATGCATCATCCATTCTCCAAGCAAACCCCACC ...x.:x::.:..:..:x:.:x........:.x.x.-----..x.xx:...:x..x..-.x.x.x:..::..x........--.:......x::x:.:::x....x...:.x.x.-----------.:.x..........:::........::....................x.:........x:..::...........x.....:.::........x:....x.x...:.x.::...:x..:.......:....x..:.:.:.......-.x..::........x:.:::.:....:x.:...x:x:x....::..:. 36M5I17M1I22M2I32M11D146M1I48M 205/301 68.1% 310/94230402 0.0% 20/301 6.6% 86481819 NA +3490 chr4 + 190214555 127346901 127346900 127346964 64 TTTCCCTAGGTAGTATATTATTTTAATTAAAATTAATTAAAAATTAGTTCACCCCAAATAAATG chr4 - 94230402 78263051 78263050 78263114 15967289 15967288 15967352 64 TCTTCCTAGGTATCATTTTTTTTTAACTAGAACTAGTTCAGAACTAGTTCATCCCAAGCAAGTG .:.:........x:..x..x......:..:..:..:..x.:..:.......:.....::..:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 49083850 NA +3256 chr4 + 190214555 127361548 127361547 127361619 72 CTGCAACCTTTACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTAGGATTATAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:.::..........x...x..x.x........::.:.......:.:.:..:.x.::. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 109164422 81050133 +3229 chr4 + 190214555 127384884 127384883 127384944 61 AATATTCAAGGAACTCAACTCAATAGCAAATAAATAAATAAATAAAAATAATCCCATTAAA chr4 - 94230402 46037184 46037183 46037244 48193159 48193158 48193219 61 AGCACTTAAGAAAATCAACCCAGAAGCAAATTGGTTAATAAATAAAAGTAACCCCAATAAA .::.:.:...:..x.....:..:x.......x::.x...........:...:....x.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 81347700 NA +7731 chr4 + 190214555 127398463 127398462 127398677 215 AACTCAAAATGCAAAAT--------AACATATAATTTTGTGATATTTCATTCAACTCAATAATCGTTTCCATATTTTTTGGCTCTCTCTGGC--CAGTGTCAAACTGTTTTGATTATTAGTTGATGAAAATGAG--AATTTTTCCCCCTGTACACTGCTATTCAGCTTTCATTTAATAGCAGTTATTTCCTCTGATATCACAGCTTGCAAGCACTGCTTAACCATTT chr4 - 94230402 40872878 40872877 40873099 53357304 53357303 53357525 222 AGTTTAGGATGCAAAATTGGGAGCCGATACATCATTATGTTATACTTTTCTC---TAAATAATTATTTCCATATTTTT-GGCTTCCTTTGGAAGCAGTGTTAAAGTGCTTTGATTATTAGCTGATGAAAATGAGGAGACTTTCTTTTCATTTCGCTGCCACGCACATCTCACCTAATTCAAATTATTTCCTTTCATATCATGACTCACAAGTGCTG-TTAGCCACTT .::.:.::.........--------:.:.:..x...x...x...:..:x:..---.x......::.............-....::..:...x--......:...x..:............:.............--:.:...:::::.xx.x.:....:.:x..xx.:...::....xxx.:.........:.x......:::..::....::...-...:...:.. 17M8I27M3D23M1D13M2I40M2I80M1D10M 150/210 71.4% 222/94230402 0.0% 17/210 8.1% 86525585 NA +3616 chr4 + 190214555 127404709 127404708 127404874 166 AATCATTTAATCCTCACAATGAGGAGGATGATTATGAGTTAGG--ACTATTAT--GCTCAAT---GCAGAAAAGGAAACTGAGACACAGAGAGGTTAAGTAATTTGCCCTAAGTCTCATAGGTAGTAAGTAGTAGAATACAGTTATAACCTTGGTAATCTGACTCCAAACTTC chr4 - 94230402 10729155 10729154 10729305 83501098 83501097 83501248 151 AATTGATTTAGCCTCACAAT-------ACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC---TGGGTA--------CAGAATCCAGGTATG----TGGGTGTGTGACACCCATCTTC ...::x..x.x.........-------.:xx:.:....x....--.:..:...--....x..---:...:x::.:........:....x.x..................x:....---.:....--------:.....x...x...:----...xx:.x....x..x.x.... 20M7D16M2I8M2I7M3I50M3D6M8D15M4D22M 107/144 74.3% 151/94230402 0.0% 29/144 20.1% 116675554 73539001 +3315 chr4 + 190214555 127417105 127417104 127417224 120 AATGTTTCCTAAAATACTAATTAAAATACAAATACAAATACAA-ATATGTGTGTGTGTGTATATATATATATACACATA----TATATGTACATATATATGTATATATATACGTATATATATATA chr4 - 94230402 81401252 81401251 81401373 12829030 12829029 12829151 122 AATGCTTC---AAATATTTCTTCAGCTAGAAATGGGGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....:...---.....:.xx..x.:x..x....:x::.x.x..-....x.x.....x...:.x..x.x.....:.....----..:.....x:.:.:.:......x..:.x.:...:x..:..:. 8M3D32M1I35M4I42M 81/117 69.2% 122/94230402 0.0% 8/117 6.8% 46015853 NA +3050 chr4 + 190214555 127417163 127417162 127417270 108 TATATATATATATACACATATATATGTACATATATATGTATATATATACGTATATATATATACATATATATATACGTATATATATATACA-TATATATACGTATATATA chr4 - 94230402 4417346 4417345 4417454 89812949 89812948 89813057 109 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x.:.......:.....:.:.:.x.x.....:::...x:x:.x.::..:.:...xx.x::.:x..x.....:..:...x...x....::-:.:.x.:..xx.:..... 90M1I18M 67/108 62.0% 109/94230402 0.0% 1/108 0.9% 122999817 67214738 +12510 chr4 + 190214555 127449672 127449671 127449960 289 GACAGAAGCAAAGTTGTAATGTACAATCATATAATTTACTTGAACAGTTGCTTTCCATATGGGAAGTAACAGA-TTGCCCAGTTGCATTTTGGCTAAGACTAAACCTACCATTATTCAGAGTAAAACAATTTTGTTGAAATCTGGAAATCCTGCAGAAAACACCTCTAAGTCTCTCTGATGACTCCTGATATTATTTCTTTTTTTCTGGGAATAGTATACAGCTTTATCCTGCTTTCTGAGTGTTCTTGACCCATGTTTAGCATATAGTATTTTCTGGAGAATATAATTA chr4 - 94230402 40884326 40884325 40884603 53345800 53345799 53346077 278 GACAGAAGCAATGTTATAATGTATAATTATATAACTTACTTGAACAGTTGCTTTCCATATGGGAAGTAACAGATTTGCCCAGCTGCATTTTGGTGAAGCCTGAATCTACCATTACTCAGAGTATAATAATTTTAGTCAAATTTGGAAGCCCTACA-AATTTATCTATACATTTCAATGACAGTG--TGACACCGCTTC--TCTTCCTAAGACAAATATACTGCTTCA--ATGCCTTACAAGAGGTCTTGAGCCATATTTATTTCACAGGACTGTC-----AGTATAATTA ...........x...:.......:...:......:......................................-........:..........:x...x..:..:.........:........x..:......:x.x....:.....::...:..-..xx:.:..x..x:.:..xx...::::x--...:.::::...--.:..:..::..xx.:.....x....:.--x...:..x::..x.x......x....:....x:x:.:..x.:.x..-----.:........ 73M1I81M1D28M2D12M2D27M2D46M5D10M 209/277 75.5% 278/94230402 0.0% 13/277 4.7% 86565346 NA +12486 chr4 + 190214555 127484175 127484174 127484462 288 GAGCCTCAAACCTT-CAGCTCTGG-------ATAACCTCTCACAATGGAGCTGCTGTTTTAATACATTCTTATAATGCCAAGGTTTTATAAAAGGAGGGTAAAAATACCTTCTTTGGGCAATGTGTGTGCAAATGGAATGGCTTATTAAAGATTCCCTCAATGAGAATGTGTAAACACTGGTCTTGGCCACAAACAAACAATTTCCTGGGGCAAACTTCATGGTCTGACTTCCCAGAAATACCCTGGAAACTGAACAAAAGGAAACGCCTTATACTGTTTTGTCTGTAGCCACAAA chr4 - 94230402 40889776 40889775 40890066 53340337 53340336 53340627 291 GAGTATCAGACCTTTCAGCTCCAGGAGACTTACATCCTCAAAAAATAAA-CCAATGATTTAATATATTATC-TACCGCCAAGCTCCCC---AAAGAAGGTAAAAATACCCTCTCTGGGCAATCCACATGCAAACTGAACAGATTATTAAGGATTCCTTAATTGAAAACATGTAAACAAGGGCCTTAGCCACATCGAAACAATTTCTTGAGGCAAACTTTATGGTCTGATTTCCCAGAAATACACTGGAAAATAAGCAAAAGGGAACAACTCTCCCTGCTTTGCTTTAAGCCACAGA ...:x...:.....-......::.-------.:.x....xx.x...::.-.::x..x.......:...x.:-..x:......x.:::x---..:..:............:...:........x::::......:x...::.x.......:......:.x.x...:..::........xx..:...:......xxx..........:..:.........:.........:.............x.......x.:.:.......:...:x..:x:x...:....::.xx.......:. 14M1I9M7I18M1D21M1D16M3D205M 208/283 73.5% 291/94230402 0.0% 13/283 4.6% 86594399 NA +3842 chr4 + 190214555 127500065 127500064 127500141 77 AAAAATATTTCCATCCTGCTTTAATGATGGTTTAATAAAGAAAGGAACATATATATTATTCAGCATTTAAATAAAAT chr4 - 94230402 75615896 75615895 75615972 18614431 18614430 18614507 77 AAACACATTTTCATTTAGTTTTAATGATAATTTAATAATCAAAAGAAGAAATGTAATGTTTAATATTTAAACAAAAT ...x.:....:...::x.:.........::........xx...:...x.x..:..x.:..:.::.......:..... 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 51884169 NA +3554 chr4 + 190214555 127548310 127548309 127548420 111 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGA chr4 - 94230402 79546172 79546171 79546281 14684122 14684121 14684231 110 AGAGAGCACAGGGGAGGGACAGCGTAAGGAAG-GATACAGAGATGGAGAGGGGGGGCTTGTTGGGGAGAGCAAGTGAGAAACGGAGGAAGAAGGGAGGAATCAGAAAAAGA ......x:x::.:...:..x..x.x:..::..-..x.x.....x......:.:.:.xxx.xx:.:.....x:..x......x::..:.......:.:...xx.:.:..... 32M1D78M 71/110 64.5% 110/94230402 0.0% 1/110 0.9% 48002138 NA +3009 chr4 + 190214555 127548344 127548343 127548403 60 AGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAGG chr4 - 94230402 82145325 82145324 82145384 12085019 12085018 12085078 60 AGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAGTGGG ..x...:::...:......:....:.........::..x..:.x..x::...:...x:.. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 45403019 NA +3065 chr4 + 190214555 127589742 127589741 127589804 63 GTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACAAAAAACCCATCTGTACATCACCA chr4 - 94230402 59596906 59596905 59596967 34633436 34633435 34633497 62 GTGAGAGGGGAAAA-AACAAACAAAAATAACACCCACACAAAAAGCCCCACTATAGAGCACCA ..x...:..:...x-........:...x:...:...........:...xx..:..x.x..... 14M1D48M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 67992836 NA +3373 chr4 + 190214555 127601627 127601626 127601700 74 CTGCAGGCTTGAACTCCTGGGTTCAAAGGATCCTCCCATCTCAGCTTCCCAGATAGCTGGAATTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:...x.:x:.:..:..........:x.x.:.x.xx:x......:.::..::.........:....x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 109404501 80810054 +3009 chr4 + 190214555 127684658 127684657 127684722 65 TCCTCTTCCTTCCCCCTTTCTCTATCCTTATTCCTCCACCTCCTTCTTTTTCTCCTTCCTCTTCT chr4 - 94230402 72861132 72861131 72861196 21369207 21369206 21369271 65 TTCTCTTCTTGCTTCCTATTTTTTTCCCTAATTTTGTTCCTTTTTCTTTGCCTCCTTCCTCTTCT .:......:.x.::...x.:.:.x...:..x.::.x:x...::......x:.............. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 54823526 NA +3020 chr4 + 190214555 127688936 127688935 127688994 59 TTTCCTTTCTTTCTTTCTTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193311 40193310 40193369 54037034 54037033 54037092 59 TCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTT .:.::.:...:...x......x..::..xx:...:x:................:..... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 87495625 NA +3057 chr4 + 190214555 127688938 127688937 127688987 50 TCCTTTCTTTCTTTCTTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTT chr4 - 94230402 36600615 36600614 36600664 57629739 57629738 57629788 50 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTT ......:..:..:...:....::..::.....:.....:x...:...... 50M 38/50 76.0% 50/94230402 0.0% 0/50 0.0% 91088323 NA +3269 chr4 + 190214555 127689058 127689057 127689131 74 CTGCAGCCTCCACATCCCAGGCTCGGGTGATCTTCTCACCTCAGCCTCTCAGGTAGCTGGGACTACACATGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx.xx.:.::..:..::...x.::x.xx:x........:...:........:.......:..... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 109491932 80722623 +3006 chr4 + 190214555 127689690 127689689 127689740 51 AGAGGGAAAAGGGAAGAGAAAAGGAAAAAGGAAAGGAGAAAGAAAGGGGAA chr4 - 94230402 23588434 23588433 23588484 70641919 70641918 70641969 51 AGAGGGGAATAGAAAATGAAAGGGAAAAGGGAAAAGGGAAAAAAAGGGAGA ......:..x:.:..:x....:......:.....:.:....:......::. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 104101256 86113299 +3225 chr4 + 190214555 127689725 127689724 127689819 95 GAGAAAGAAAGGGGAAAGGAAAGGGGGAGGGAAGAGGCAAGGGAAGGGAAGGGAAGGATATAAGTGTTCGATATAGATAGAAACATAGAAAGTAA chr4 - 94230402 47789433 47789432 47789527 46440876 46440875 46440970 95 GAAAAAGAAAGGAAAAGGGAAAGGGGAAGGGGAAGAAAATGTTAACAGGATAGAACCACATAGGTTTCCAGTGCAAGTGGGAGCAAGGAAAAAAA ..:.........::..:.........:....:.::::x.x.xx..x:.:.x:...xx.:...:..x.:.::.::.::.:.:.:..x:....:x.. 95M 57/95 60.0% 95/94230402 0.0% 0/95 0.0% 79900292 NA +5911 chr4 + 190214555 127730594 127730593 127730780 187 GCCTCATCCTTCGGGAAGGACCTTCTGGCCGGCGGAGTCGCGGCAGCTGTGTCCAAGACAGCGGTGGCGCCCATCGAGCGGGTGAAGCTGCTGCTGCAGGT-------------------GCAGGC--------GTCGTCG--------------------------------------------------------------------------------------------AAGCAGATCAGCCCCGAGGCGCGGTACAAAGGCATGGTGGACTGCCTGGTGCGGATTCCTCGCGAGCAGGGTG chr4 - 94230402 77535581 77535580 77535886 16694517 16694516 16694822 306 GCCGTGTCCTTTCTCAAGGATTTCCTCACAGGGGGGGTGGCGGCCGCCATCTCCAAGACCGCCGTCGCCCCCATCGAGCGGGTGAAGCTGCTGCTGCAGGTGAGCGGCGGGACGGGGGCGGCGGGCGTTCCAAGGTCGCCGCAAGGAGAggggggcggcggcggcgggggggcgggcggccgcgcggagcggcgctgacggcgccgcgggccTCGCAGGTGCAGCACGCCAGCAAGCAGATCGCCGCCGACAAGCAGTACAAGGGCATCATCGACTGCGTGGTGCGCATCCCGCGCGAGCAGGGCG ...x::.....:xxx.....::.:..x:.x..x..:..x.....x..::.x........x..x..x..x................................-------------------..:...--------....:..--------------------------------------------------------------------------------------------.........:x.x....x:x..:......:.....x:.x......x.......x..:..x...........:. 101M19I6M8I7M92I73M 145/187 77.5% 306/94230402 0.0% 119/187 63.6% 50195013 NA +5860 chr4 + 190214555 127730609 127730608 127730795 187 AAGGACCTTCTGGCCGGCGGAGTCGCGGCAGCTGTGTCCAAGACAGCGGTGGCGCCCATCGAGCGGGTGAAGCTGCTGCTGCAGGTGCAGGCGTCGTCGAAGCAGATCAGCCCCGAGGCGCGGTACAAAGGCATGGTGGACTGCCTGGTGCGGATTCCTCGCGAGCAGGGTGCGTCA-AGGCAGGCCG chr4 - 94230402 53470057 53470056 53470209 40760194 40760193 40760346 153 AAGGACTTTTTGGCCGGCGGGGTCGCTGCCGCCATCTCCAAGACGGCTGTCGCCCCCATCGAGAGAGTAAAGTTGCTGCTGCAGGTGAG-------------------------GAggcgggg------ggcgcggggggctgcgggcggcggAGCCCGACGGAGC----TGCGCCACAGGTGGGCCG ......:..:..........:.....x..x..::.x........:..x..x..x.........x.:..:...:..............x:-------------------------......x..------...::..x..:....xx.xx.....x:..xxxx....----....:..-...::..... 89M25D9M6D37M4D7M1I10M 116/152 76.3% 153/94230402 0.0% 36/152 23.7% 74260552 NA +5808 chr4 + 190214555 127744670 127744669 127744790 121 AGGTTTCTTCAGTTTTTGGCGTGGCAATTTGGCAAATGTTATTCGGTATTTTCCAACACAAGC-TCTAAACTTTGCTTTTAAGGACAAATACAAGCAGCTATTCATGTCTGGAGTTAATAAA chr4 - 94230402 7874468 7874467 7874582 86355821 86355820 86355935 115 AGGATTTTTCAGCTTCTGGCATGGCCATTTGTCAAATGTTATTCAGTATTTTCAAATACAGGCTTCTAAACGTTGCTTTTATAGA-------AAGGGGATTCTCATGTCCAAAGTGGATAAA ...x..:.....:..:....:....x.....x............:........x..:...:..-.......x.........x:..-------...x:.x.x:.......:::...x:..... 63M1I21M7D30M 90/114 78.9% 115/94230402 0.0% 8/114 7.0% 119870202 70344353 +5243 chr4 + 190214555 127764240 127764239 127764358 119 CAGTTCTGGAGGTGGTTTTTGGCAAACCTGGCTTCTGGTGGAGCTGCTGGGGCAACATCCTTATGTGTAGTATATCCTCTAGATTTTGCCCGAACCCGATTAGGTGTCGATATTGGAAA chr4 - 94230402 7874583 7874582 7874701 86355702 86355701 86355820 119 CAGTTCTGGATAAAGTTTTTGTCAAATCTGGCTTCTGTTAGAGCTACAGGAGCAACATCCCAGCGTTTAGAATATCCATTAGACTTTGGGCAAACTTTGTTACCCACAGTCATTTGAAA ..........x:x:.......x....:..........x.:.....:.x..:.........:x::..x...x......x:....:....xx.:...::x:...xx:::x.x:...x.... 119M 83/119 69.7% 119/94230402 0.0% 0/119 0.0% 119889657 70324898 +6883 chr4 + 190214555 127767064 127767063 127767221 158 AGGTCCTGAGGAGCGACAATTCAAGGGTTTAGGTGACTGTATTATGAAAATAGCAAAATCAGATGGAATTGCTGGTTTATACCAAGGGTTTGGTGTTTCAGTACAGGGCATCATTGTGTACCGAGCCTCTTATTTTGGAGCTTATGACACAGTTAAGG chr4 - 94230402 7874701 7874700 7874858 86355545 86355544 86355702 158 AGATGCTGCTGAGCAACAGCTCCAGGAACTTGGTGACAGTACTGCTAAAACTGCCATGGCAGATGGACTTCCTGGACTGTACCAAAGTTTTGGCATTTCAGTACAGGGAGTCACTGTATACCAAATCACCTATTATGGATGTTACAATACCATTAAGG ..:.x...xx....:...::..x...:x:.x......x...:.::x....:x..x.x:x........x..x....x:.:......:.x.....::.............x:...:...:....:.::.x.:....x....xx...::.:..x:...... 158M 109/158 69.0% 158/94230402 0.0% 0/158 0.0% 119892363 70322192 +3194 chr4 + 190214555 127772760 127772759 127772808 49 CCAACATATGATTTCTTTTTTTTTTTCTTTTTTTTTTTTTGAGACAGGG chr4 - 94230402 67837407 67837406 67837455 26392948 26392947 26392996 49 CCAAAATGTGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG ....x..:.......x..x.:.....:.................x..:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 59935353 NA +3392 chr4 + 190214555 127792260 127792259 127792378 119 TATCTTATC----AAATTGTCCTATGAAACTAGCCAAGTTGTATTCTTTTTGTTTTCTCCCTGGCTGAGTCCAAATTATATTCTTCTAGTCCTCAAATGAGCATTACCTTAGGAACCATTATT chr4 - 94230402 51492714 51492713 51492829 42737574 42737573 42737689 116 TATTTCATCTAAGAAATTGTTCTATTGAATTAGACCACTTGTATTATTTTTATTTTCTGACTGGTGAAATCTGATTTA---CTCACTGTTCCTTGAATGG--ATTAACTTTGGA--TATTATT ...:.:...----.......:....x:..:...x.x.x.......x.....:......xx....:x:.:..::.x...---:::x..:x....::....:--....x...x...--:...... 9M4I65M3D19M2D12M2D7M 80/112 71.4% 116/94230402 0.0% 11/112 9.8% 76299546 NA +3142 chr4 + 190214555 127803087 127803086 127803151 65 TGGTTTTTTTGTTGGTTGGTTTTTTGGTTGTGTTTTTTGTTTTTTTGTGTGTTTTGTTTTTGTTT chr4 - 94230402 84975880 84975879 84975944 9254459 9254458 9254523 65 TGCTTTTTTTGTTGGTTGATGTTTTCTGTTTGTTTTCTGCTGCCTTCGATGTTTTGTTTTTACTT ..x...............:.x....xxx.x......:..:.x::..xx:............::.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 42827207 NA +3174 chr4 + 190214555 127831504 127831503 127831581 78 AAAAAAAAAAAAAAAAAAAAGGAAGCAATCTAAATATCTGTCAATAGGAAACTAGATCAATAAGTTGATGCATCCATA chr4 - 94230402 91998463 91998462 91998540 2231863 2231862 2231940 78 AAAAAAAAAGAAAAAAAAAGAAAACCAACCTAAAAACCAACCAACCAAAACCCAAAACAAGGGGTAGATATGTTCATA .........:.........:::..x...:.....x.:.x::...:x::..x.:.:.x...x::..x...:::.:.... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 35833041 NA +3100 chr4 + 190214555 127846769 127846768 127846859 91 TCAAAAAAAAAAAAAAAAAAAAAAATCAAAGTAGATTTTTACAGAAGTTCAATGAGATTCAAGAGAAAGCTGAAAACCAACACAAAGAAAT chr4 - 94230402 63011808 63011807 63011898 31218505 31218504 31218595 91 TTAAGAAAGAAAAAAAGGAAAAATAGCAAAGAGCATGTTTTTAGAAGTACGTAAAAATGCATAATAGAGCAGAAAATTAGTGAGGAGAAAT .:..:...:.......::.....x.x.....x:x..x...x:......x.:xx:.:..x..x:.x.:...x.....::.:::x::...... 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 64834961 NA +3383 chr4 + 190214555 127884021 127884020 127884107 87 TTACTACCTTGATTTTCCAAAGTATTTTGAAGCAAATTATAGACATATTTTTAACTAGAAATATTTCAAAGTATAGACTTCTTTAAA chr4 - 94230402 59930104 59930103 59930190 34300213 34300212 34300299 87 TTGCTACTGTTACTCTCCAGATTATTTTGAAGTATTTTATAGAGATTCTTTTAACTGAAATAATGTCCTAGCATACATGttttttaa ..:....:x.x.:.:....:.x..........:.xx.......x..x:........::..xx..x..xx..:...x.:x.:...x.. 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 67953917 NA +3401 chr4 + 190214555 127897818 127897817 127897866 49 TTAGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 9524466 9524465 9524514 84705889 84705888 84705937 49 TTAGGGCTGTTTTTTTTTTTTTTTTTCCATTTTTTATTCTTAAGACAGA ........x.................::x......x..:..:....... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 118373352 71841203 +3080 chr4 + 190214555 127907996 127907995 127908053 58 AACAAAAGCGAAACTCCATCTCAAAAAAAAAAAAAGAAAGAAAAAGAAAAAAAGAAAA chr4 - 94230402 1263288 1263287 1263345 92967058 92967057 92967115 58 AACAACACCAAAACACCACCACAACATCAGCAAAAGGAAGAAAAAAAAAAAAAGAAAA .....x.x.:....x...:.x...x.xx.:x.....:........:............ 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 126644708 63569847 +3917 chr4 + 190214555 127914168 127914167 127914301 134 TTCTATTTTAATGGTTGTGTATATACATTT-CTTCCCACCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTTCTTCCTTTCTTCCTCCCTCCCTCCCTCTCTTCTTTCCTTCCTCCCTCCCTCCCTCCCCATAT chr4 - 94230402 92729576 92729575 92729707 1500696 1500695 1500827 132 ttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTC---CCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCCCACAT ...:.....xx.xx..x.x.x.x.x.....-.:.:..x::x:....::.x.x:.x...:.:x..:..:.:....:.x:...:.......:..---.....x......:..::.x:.::..::::.:......:.. 30M1I61M3D40M 83/131 63.4% 132/94230402 0.0% 4/131 3.1% 35184592 NA +3927 chr4 + 190214555 127927762 127927761 127927839 78 CTGCAGCCTCAAACTCCTGGGTTCAAGCAATCCTCTCGCCTCAACCTCCCAAGTAGCTGGGACTACAGGCGTGCTCCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:.....:x..:..:...........::x.:.x.xx.x....:...::...........:......--.....x... 67M2D9M 58/76 76.3% 76/94230402 0.0% 2/76 2.6% 109730636 80483919 +3067 chr4 + 190214555 127940497 127940496 127940551 55 AAATATTATTCTGTATATGGTATATATATATATATATATATATGTGTGTGTGTGT chr4 - 94230402 86023337 86023336 86023391 8207012 8207011 8207066 55 AAGCATCATCCTGTATTTGGCCTATATCCATAGATATAGATATGTGTGTGTATAT ..::..:..:......x...:x.....x:...x.....x............:.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 41917160 NA +3119 chr4 + 190214555 127951053 127951052 127951109 57 GTCTCAAAAAAAAAAAGGAAAAAAAAGAAAAAATAAATTTAAAAATAGCTGTTGAGA chr4 - 94230402 61875813 61875812 61875869 32354534 32354533 32354590 57 GCTTGAAAAAGAAAAAAGAAGAAAAAAAGAAAATTAATTTAAACAAAGCTGAAGAGA .::.x.....:.....:...:.....:.:.....x........x.x.....xx.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 66075240 NA +3126 chr4 + 190214555 127974128 127974127 127974213 86 CTTCCAACTATTTAAATTATGCAATGGTCTTTTTTGAAGAGAATATTAACCTTAAGTTCTGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18967275 18967274 18967360 75263043 75263042 75263128 86 CTTCAAAGTTTTTAAGCCAAGCTAGGTTCTGTACCCTGGAGAATATCAAACATATTGACTGTTTTTTTTTTCTCTCTTTTTTTTTT ....x..x.x.....:::.x..x.x.x...x.x::xx:........:..x.x..xxxx.............:.:.:.......... 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% 109006853 81207702 +3558 chr4 + 190214555 127974273 127974272 127974360 88 CTGCCACCTCACTCTCCTGGGCTCAAGCTATCCTCCTACCTCAGCCTTTTGAGTAGCTGGGACTACAGGCGCACACCACTATGGACCA chr4 - 94230402 18197126 18197125 18197211 76033192 76033191 76033277 86 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTATCA ..:.x:..:x.xx..:.....:.....:xx.:.x.xx:x..........::.........:......--..::.......:..x.:.. 67M2D19M 60/86 69.8% 86/94230402 0.0% 2/86 2.3% 109777147 80437408 +3323 chr4 + 190214555 127994955 127994954 127995027 73 CTGCAACCTCTGCCTCCTGGGTTCAAGAGATTCTCATGTCTCAGCCTCCCTAGTAGCTGGGATTATAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:...........x.x...x..x.x........::.x.........:.:..:.x.::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 109797829 80416726 +3519 chr4 + 190214555 127997751 127997750 127997854 104 TTTCTTACTAGCTCTCATCTTCCTCCCTCC------------TTACTTTCTGTTCCACTTCTTCCTTCTTTATTCTTCCTTCTTCTTCTTTCTTCATCTCCTCCTTCTCCTCCTTC chr4 - 94230402 92729586 92729585 92729701 1500702 1500701 1500817 116 tttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ......x:.xx:.::...:.....:...::------------.:..:::..:..:.x.:.:.....x:...x...:......::..:x:......x:.:.x:.:....:...:.:. 30M12I74M 66/104 63.5% 116/94230402 0.0% 12/104 11.5% 35268165 NA +3104 chr4 + 190214555 128003937 128003936 128004002 66 CTGTCTCGATTTAAAAAAAAAAAAAACAAAAAAAAACCAAACAAACAAAAAACCATTTCAATTGTA chr4 - 94230402 80985526 80985525 80985591 13244812 13244811 13244877 66 CTGGATTGATTTCAAACAAAACAAAACAAAAAACACACAAAAAAACCCACAACCATTTCCAGTGTA ...xx.:.....x...x....x...........x.xx....x....xx.x.........x.x.... 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 47018411 NA +3044 chr4 + 190214555 128007311 128007310 128007359 49 AAGTGAGACCTTGTCTCTAAAAAAAAAAAAAAAAAAAAGGTTAAAATGT chr4 - 94230402 71304829 71304828 71304877 22925526 22925525 22925574 49 AAGTGAGCTTTCTTTTCAGAAAAAAGAAAAAAAAAAAAGGTCAAAATGT .......x::.:x.:..x:......:...............:....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 56702482 NA +3032 chr4 + 190214555 128053852 128053851 128053937 86 CTGTTTTTTTTCTTTTTTTTTTTTTTTAATGTCATCTGGTAAGTTGTAGTGTTTGTTTCTTTGTTTCTTTTTTTATTTTTTTGAGA chr4 - 94230402 70893445 70893444 70893530 23336873 23336872 23336958 86 CTGTTGTTGTTGTTGTCTTTTTTTATTATCATCATTTTTTAAATTATGGAGCTGTTTTTTTCTTTTCTATTCCTATTTAATTAAAA .....x..x..x..x.:.......x...x::....:.xx...:..:.:.x.:.xx...:..:x.....x..::.....xx..:.:. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 57160407 NA +3674 chr4 + 190214555 128056572 128056571 128056649 78 GTCTCAAACTCCTAAGCTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCAGCTGCCACTGTG chr4 - 94230402 18197131 18197130 18197206 76033197 76033196 76033272 76 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .:.:x..:..:..::.:.......x...x.xx.x........:............:......x.::--::........ 66M2D10M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 109859441 80355114 +3186 chr4 + 190214555 128058652 128058651 128058699 48 CAGCTCAAAAAAAAAAAAAAAAAAACCAACAAAGAAACAAAAAAAGAA chr4 - 94230402 65284344 65284343 65284391 28946012 28946011 28946059 48 CAGTCCAAAAAAAAAAAAAAAAAGCCTAACAAACAAACAAACAAAAAA ...::..................:x.:......x.......x...:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 62774308 NA +4204 chr4 + 190214555 128065250 128065249 128065398 149 TTAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCCTTTCTT------TTCTTTTCTTTTCTTTTCTTT--------------TCTTTTCTTTTCTTTTCTTTCTTTTTTCAAGAGAT chr4 - 94230402 45185590 45185589 45185758 49044645 49044644 49044813 169 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGGTAAT .:.x....::....:..xx::.:xx..:.:.x:...x..........::..::x.:....x:::..::...:...:.xx.....:.......:------.x...:..x:.x...x.....--------------...:..x..:.:..:.....xx.:...:.:.x:.. 93M6I21M14I35M 96/149 64.4% 169/94230402 0.0% 20/149 13.4% 82879660 NA +3884 chr4 + 190214555 128068396 128068395 128068478 83 CTGCAGCCTAGAACTCCTGGGCCCAAGGGATCCTCCTGCCTCAGCTTCTCAAGTAGCTAGGACTACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:.:.:..:.....::....x.x.:.x.xx.x......:.:..........:.:......--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 109871270 80343285 +3010 chr4 + 190214555 128073415 128073414 128073472 58 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAATACTACCTC chr4 - 94230402 1220214 1220213 1220271 93010132 93010131 93010189 58 TCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAAGTCCCAGTTC ......:::x.............x....x....x.......x.:....:.x.:.x:.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 126853201 63361354 +3043 chr4 + 190214555 128075508 128075507 128075565 58 GGGAAGCTTAACCTAACCTATTATTTCTTTCTTTCTTTTCTTTTTTTTTTTTTCCTTT chr4 - 94230402 83048884 83048883 83048941 11181462 11181461 11181519 58 GAAAAGTTTCACCAACTTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTT .::...:..x...x.x::....x.........x...........:.....:.x.x... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 45026624 NA +3066 chr4 + 190214555 128098720 128098719 128098805 86 AAAGCATGTGTTCCTGTATATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACAGTGT chr4 - 94230402 57764641 57764640 57764726 36465677 36465676 36465762 86 AAAGCATGGGCTAACTTATACATATATAAATATGTGTATGTACATATATTACTCTTGTCTTCTTGTTTCACTTCCAAGTTCAGTGT ........x.:.xx:x....::...:.:x....:.:...:..:.......x:.:..x.:..:..x...:x:..::x.:xx...... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 70334079 NA +3571 chr4 + 190214555 128098731 128098730 128098789 59 TCCTGTATATGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735345 92735344 92735403 1495000 1494999 1495058 59 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:..:....x...:.....:..:.:..........x....:.x.........:.x... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 35363386 NA +3066 chr4 + 190214555 128098740 128098739 128098795 56 TGTATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:..:.x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 35363392 NA +3029 chr4 + 190214555 128098742 128098741 128098793 52 TATGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x.:...:...:..:.:........x......:.x.........:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 35363390 NA +3004 chr4 + 190214555 128099674 128099673 128099741 68 AGTGTGAGTAAAGCATGAAGATCTTTATAGGGATATATATATACACACACACACACACACACATATAT chr4 - 94230402 64433195 64433194 64433262 29797141 29797140 29797208 68 AACGTAGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTAT .::..:::x......x:..xx...:.:.:x.x........x......:......:..:..::..:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 63666479 NA +3010 chr4 + 190214555 128099707 128099706 128099754 48 TATATATATACACACACACACACACACACATATATATTTCTGTTGGAT chr4 - 94230402 69706450 69706449 69706497 24523906 24523905 24523953 48 TATATATATATACACACACAAGTAAACATATATATATGCCTGTTGTAT ..........:.........x::.x...:........x:......x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 58393257 NA +4067 chr4 + 190214555 128100348 128100347 128100421 74 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGTACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.............x...x.xx.x........::...........x......x.:.... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 109903222 80311333 +3411 chr4 + 190214555 128100755 128100754 128100905 151 TTTTGCAAATATTTTTTCCTAGTTTTTGTCTTTTCATTTTCTTTTCTTTTCTTTTTTTTTTTGTTTTTTGTTTTTGTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGGTTGGAGTGTAATGGTGTGATCTCAGCTC------ACTGCAACCTGCGT chr4 - 94230402 46961829 46961828 46961951 47268452 47268451 47268574 123 TCTTGCAGATGCTTGTAGTT-GTTTCTTCCTTTTTACCTCTCTGTTTTTTCTTATTGTTTTGGTTTGTTGCTTTTTTTTTTGAGA---------------------------------AGTGGTGTGATGTGGGCTCCAAGGAACTGAAGCCTGCAT .:.....:..::..x.xx:.-....:.x:.....:.::.:::.x.:.......x..x....x....x...:....x.........---------------------------------.:.........x.x:....------....x.:.....:. 20M1D64M33D19M6I14M 85/117 72.6% 123/94230402 0.0% 40/117 34.2% 81138926 NA +3206 chr4 + 190214555 128113328 128113327 128113386 59 TTTTCTTTTTCTTTTCTTTTTTTCTTTTTTTTTTTTTTTGAGACAGAGAGTTGCTCTGT chr4 - 94230402 76182412 76182411 76182470 18047933 18047932 18047991 59 TTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGT ....:..x.:x.:...xx.....:..x............:...x.:..:....:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 51930916 NA +3866 chr4 + 190214555 128133772 128133771 128133854 83 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCCTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::..........x...x.xx.x........:..:.........:......--.x........::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 109936646 80277909 +3146 chr4 + 190214555 128156848 128156847 128156922 75 TAAAAGGCTTGAAGCTAAAAAAAAAAAAAAAAAAAAAAAAACTGGAAAGAGAAGAAAACCTAGAGAAATAAGGCT chr4 - 94230402 22042098 22042097 22042169 72188234 72188233 72188305 72 TGAAAGGGTCTGAGTGAGAGACAAAAAAAAAAAAAAAAAAAGTGCAGAGAGGAGAAACCC---AGAAAGGAAGTT .:.....x.:x:..:x.:.:.x...................x..x.:....:.....x..---.....x:.:.:. 60M3D12M 53/72 73.6% 72/94230402 0.0% 3/72 4.2% 106114750 84099805 +3464 chr4 + 190214555 128166943 128166942 128167039 97 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATATACATACACACGTGTGTACGT chr4 - 94230402 7596385 7596384 7596480 86633923 86633922 86634018 96 TTTTTCTCTAAGACCATCTTCATCT-TCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:.:.....xxxx.:x...::x...-..:...:.x..::...:.x..:....:......:...:....:.x.:......x...:....:::.:x.:. 25M1D71M 63/96 65.6% 96/94230402 0.0% 1/96 1.0% 120570558 69643997 +3091 chr4 + 190214555 128166951 128166950 128167027 77 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATATATACATATATACATACAC chr4 - 94230402 80495418 80495417 80495494 13734909 13734908 13734985 77 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ..:..:.x...:......x.:.......:.:.x.:.x....::........x..xxx:..:.x.:.:.:..::x... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 47671533 NA +3161 chr4 + 190214555 128166988 128166987 128167054 67 ATATATACACACACACATATATATACATATATACATACACACGTGTGTACGTATATATACACACACA chr4 - 94230402 38535895 38535894 38535955 55694448 55694447 55694508 61 ATATATACACACGTACATGAGAATACA------CATACACACATGTGTATGTATGCATACAAGAACA ............::....:x:x.....------.........:......:....::.....x:x... 27M6D34M 48/61 78.7% 61/94230402 0.0% 6/61 9.8% 89631093 NA +3082 chr4 + 190214555 128166999 128166998 128167060 62 CACACATATATATACATATATACATACACACGTGTGTACGTATATATACACACACACACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x..::.....x..:..:.........::....:::.x.:...:..x:..:...:.. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 120570587 69643968 +3364 chr4 + 190214555 128167007 128167006 128167077 71 TATATACATATATACATACACACGTGTGTACGTATATATACACACACACACACATATACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x...:.x...::.x::.::...:::....:...:..:.:...xx......:..:............. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 113202193 77012362 +3029 chr4 + 190214555 128176100 128176099 128176180 81 ATATATACACACATATATATACACATATATGTGTGTATATATATTTATATTATATATATAAATATATATATTATATATAAA chr4 - 94230402 63997343 63997342 63997423 30232980 30232979 30233060 81 ATAAACATGTCTGTGTACATGCGCACACATGTATATGTATATGTGCATACTGTATATAAAAATGCATAAAATCTTTGTAAA ...x.:.:::x::.:..:..:.:..:.:....:.:.:.....:.x:...:.:......x....::...x.x.x.x.:.... 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 64178757 NA +3559 chr4 + 190214555 128176100 128176099 128176170 71 ATATATACACACATATATATACACATATATGTGTGTATATATATTTATATTATATATATAAATATATATAT chr4 - 94230402 61485373 61485372 61485443 32744960 32744959 32745030 71 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGAT .....:.:...:.:.:.:..:....:x.:.....:.:...:..........x.:..x..:x...x...x.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 66690727 NA +3254 chr4 + 190214555 128184951 128184950 128185077 127 TGTATGTTTATGTATGTGCCTATGTATGTATGTGCATATATTTACACATATATACATATATACACATATACATACATGTACATACACATATATATAC--CCATATATAAAATTTTCTTCATTCATCCAT chr4 - 94230402 2492109 2492108 2492237 91738166 91738165 91738294 129 TATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCACAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATATGCCCCCAT .:...::.:......:..::.x.........x.x::..x.:..x:x:..xx........::.:.x.....xx.x..::x:x.x...:..x.....:.--:....x:x...xx.x...x:..x.x:.... 97M2I30M 79/127 62.2% 129/94230402 0.0% 2/127 1.6% 125692842 64521713 +3376 chr4 + 190214555 128184951 128184950 128185077 127 TGTATGTTTATGTATGTGCCTATGTATGTATGTGCATATATTTACACATATATACATATATACACATATACATACATGTACATACACATATATATAC--CCATATATAAAATTTTCTTCATTCATCCAT chr4 - 94230402 2495707 2495706 2495835 91734568 91734567 91734696 129 TATATACTCATGTATATGTTTCTGTATGTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCATAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATATGCCCCCAT .:...::.:......:..::.x.........x.x::..x.:..x:x:..xx........::.:.x.....xx.x...:x:x.x...:..x.....:.--:....x:x...xx.x...x:..x.x:.... 97M2I30M 80/127 63.0% 129/94230402 0.0% 2/127 1.6% 125689244 64525311 +3075 chr4 + 190214555 128184984 128184983 128185054 71 GCATATATTTACACATATATACATATATACACATATACATACATGTACATACACATATATATACCCATATA chr4 - 94230402 72971491 72971490 72971561 21258842 21258841 21258912 71 GTATGTGTTACAATACACATGTGTATGTAAACATATACATGCTTGTACATAATCATATATAAACCAGCATA .:..:.:..xxx.:.:.:..:::...:..x..........:.x........xx........x...x::... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 55213493 NA +3666 chr4 + 190214555 128193692 128193691 128193764 73 CTGCAACCCCTGCCTCCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:...xx:x..:..........::.x...x.xx.x........::::...........:....x..... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 109996566 80217989 +3352 chr4 + 190214555 128238044 128238043 128238138 95 TGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGGTATACACATAGATATACCATTGTATATGGTATGCCATATAAATATACACACA chr4 - 94230402 48089505 48089504 48089599 46140804 46140803 46140898 95 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATA ........:::........:....x.x........:..:..:x..:...x.xx:...xxx:.x::.x...x.:.xxx...x.:...::.....:. 95M 62/95 65.3% 95/94230402 0.0% 0/95 0.0% 80148539 NA +3181 chr4 + 190214555 128261882 128261881 128261975 94 AAAAAAAAAAAAAAAAAACAAACAAACCAAAACCACACAG-------------------------CTATCTATACCAATTCTAAGTT---AATTTGGACTAAACAAGATCTTATTAATAGCA chr4 - 94230402 78758714 78758713 78758835 15471568 15471567 15471689 122 AAAAAAAAAAAAAGAAAACAAACAAACAAAAACCTCACAGGACCTTGTTTTGGCTCTTTGGAAAATTATTTTTACTATTTAGAAGTCTAGATTTTGCAGCAAATCTGATTCAATTAATACCA .............:.............x......x.....-------------------------:...:.x...:.x..xx....:---.x....x.x:...:xx...::x.......x.. 40M25I22M3I32M 72/94 76.6% 122/94230402 0.0% 28/94 29.8% 49503168 NA +3584 chr4 + 190214555 128313239 128313238 128313336 98 TCTTCCTCTTTTCCTGTTTGGTTTGCTCCTTGGTCTTGGTGAATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982273 18982272 18982354 75248049 75248048 75248130 82 tctttctttctttctttttttttctctctctc----------------tctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....:..:.:..:..x...xx..:x...::.x----------------.x.x.x.x.x....................................::.. 32M16D50M 63/82 76.8% 82/94230402 0.0% 16/82 19.5% 109330966 80883589 +3272 chr4 + 190214555 128313242 128313241 128313337 96 TCCTCTTTTCCTGTTTGGTTTGCTCCTTGGTCTTGGTGAATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982258 18982257 18982353 75248050 75248049 75248145 96 TtttcttttcttttttctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA .::.......:.x...xx..:x:..:..xx.:..xx.xxx:xx.x.x.x.x.x.x.x................x...................::. 96M 65/96 67.7% 96/94230402 0.0% 0/96 0.0% 109330984 80883571 +3139 chr4 + 190214555 128313293 128313292 128313332 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 109330978 80883577 +3102 chr4 + 190214555 128313295 128313294 128313330 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 46684231 NA +3353 chr4 + 190214555 128313295 128313294 128313334 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 109330980 80883575 +3316 chr4 + 190214555 128313297 128313296 128313332 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 46684233 NA +3102 chr4 + 190214555 128313299 128313298 128313334 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 46684235 NA +3250 chr4 + 190214555 128319848 128319847 128319904 57 AAAACCAAAACCAAAACCAAAACAAAAAACAAACAAACAAAAAAAAACACAAAACAA chr4 - 94230402 25740682 25740681 25740738 68489665 68489664 68489721 57 AAAACCAAAAGCAAAGCCAAACAAACAAAGAACCAAAAAAAAAAAAAGTCAAAACAA ..........x....:.....xx..x...x..x....x.........xx........ 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 102579166 87635389 +3240 chr4 + 190214555 128319852 128319851 128319914 63 CCAAAACCAAAACCAAAACAAAAAACAAACAAACAAAAAAAAACACAAAACAAAAAAGAAAGT chr4 - 94230402 11035784 11035783 11035845 83194558 83194557 83194619 62 CCAAGACCAAAATCAGGAGAAAAAACAAAAGCACAAAAGGAAAGACAAAGT-AAAAAGAGAGT ....:.......:..::.x..........x:x......::...x.....::-.......:... 51M1D11M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 117284068 72930487 +3144 chr4 + 190214555 128319863 128319862 128319912 50 ACCAAAACAAAAAACAAACAAACAAAAAAAAACACAAAACAAAAAAGAAA chr4 - 94230402 20997013 20997012 20997062 73233341 73233340 73233390 50 ATTAGAACAAAAAACAAGCAAACAAAAAACACCACAGAAAAAAAAAGGGA .::.:............:...........x.x....:..x.......::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 107322850 82891705 +3145 chr4 + 190214555 128319866 128319865 128319912 47 AAAACAAAAAACAAACAAACAAAAAAAAACACAAAACAAAAAAGAAA chr4 - 94230402 21208660 21208659 21208706 73021697 73021696 73021743 47 AAAACAAAAAACAAACAAACAAAAAAAAACCCACAGAAGAAAAACAA ..............................x..x.:x.:....:x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 107111206 83103349 +3639 chr4 + 190214555 128320366 128320365 128320443 78 TTCCTTACTTCTCTTCTCTTCTCTTCTCTTCTCTCTTCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTTCTTTTTCTT chr4 - 94230402 70202190 70202189 70202266 24028137 24028136 24028213 77 TTCCTGAACTGTCTCTGCTTCTTCTCTCTTCTCTCTTCTCCC-CCCTCCCCCCCTTCCCAATTTTCCTTTTCTCACTT .....x.x:.x...::x.....::..................-.......::......:xx:..:.:..:.:.:x... 42M1D35M 56/77 72.7% 77/94230402 0.0% 1/77 1.3% 58118176 NA +3244 chr4 + 190214555 128320400 128320399 128320467 68 CTTCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTTCTTTTTCTTTTATTTTGTCTTTCTCTCTTTCCC chr4 - 94230402 9693767 9693766 9693833 84536570 84536569 84536636 67 CTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTT-TTTCTTTCCCTTTCCC .....:....:.:.::.:....::...:.:x...:..x...:.x.......-.:.:.:..:....... 51M1D16M 48/67 71.6% 67/94230402 0.0% 1/67 1.5% 118626633 71587922 +3238 chr4 + 190214555 128320413 128320412 128320477 65 CCCTTCCTTCCTTCCTTCCTTTCTTTTTCTTTTATTTTGTCTTTCTCTCTTTCCCCCCTCCTTCT chr4 - 94230402 72861129 72861128 72861193 21369210 21369209 21369274 65 CTTTTCTCTTCTTGCTTCCTATTTTTTTCCCTAATTTTGTTCCTTTTTCTTTGCCTCCTTCCTCT .::...::.:...x......x.:......::.x.......:::.:.:.....x..:...:.:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 55459284 NA +3043 chr4 + 190214555 128322773 128322772 128322830 58 CAAAAACAAAAACAAAACAAAACAAAACAATGAAACTCCTTTTCTCTTTCCAGAGAGA chr4 - 94230402 68874972 68874971 68875029 25355374 25355373 25355431 58 CAAAAACAAGAACAAAACAAAACAAAAAAATAGTTCTACAATTTTACTTTCAGAAAGA .........:.................x...::xx..x.xx..:.x:..:....:... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 59447801 NA +3194 chr4 + 190214555 128333307 128333306 128333390 84 CTTAAATTGGCCAGCGACTATGGTGTGATCT---------GGTAAAAAAAACAAAAACAACAAAACAACAACAACAACAACAACAAAACAAAA chr4 - 94230402 37057518 37057517 37057610 57172793 57172792 57172885 93 CTTAGATTCTGCATTGCCAATGAGATAATCTTTCTAGTAAAATAAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAAATTAAAA ....:...xxx..x:.x.x...:x:.:....---------::.......x.x.x....x..................x.....x...x:.... 31M9I53M 62/84 73.8% 93/94230402 0.0% 9/84 10.7% 91275789 NA +3356 chr4 + 190214555 128333335 128333334 128333407 73 TCTGGTAAAAAAAACAAAAACAACAAAACAA---CAACAACAACAACAACAAAACAAA-AACAAAAAAAACACGCTG chr4 - 94230402 12295665 12295664 12295741 81934662 81934661 81934738 77 TCTGGGGAAAAAAAAAAAATCCACAAAAAAAACCCAACAACAACAACAACAAAAAAAACAGTGAATATAACAGACTG .....x:.......x....x.x......x..---....................x...-.:::..x.x....x:... 31M3I24M1I18M 59/73 80.8% 77/94230402 0.0% 4/73 5.5% 116037670 74176885 +3344 chr4 + 190214555 128333343 128333342 128333400 58 AAAAAACAAAAACAACAAAACAACAACAACAACAACAACAAAACAAAAACAAAAAAAA chr4 - 94230402 87341602 87341601 87341659 6888744 6888743 6888801 58 AAAAAACAAAAACAACAAAACAACCACTCTAAAGACCCCAAAGCCAAAAAAAAAAAAA ........................x..xx:..x:..xx....:.x....x........ 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 40991741 NA +3165 chr4 + 190214555 128340734 128340733 128340784 51 CCATCTCAAAAAACAAAAACAAAAACAAAACAACAAAAAAACCCCACAAAG chr4 - 94230402 6076397 6076396 6076447 88153956 88153955 88154006 51 CCTTCTTAAAAAAAAACAACAAAAACAAACAAACAAAAAAAACCCACATAG ..x...:......x..x............xx..........x......x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 122264337 67950218 +3240 chr4 + 190214555 128398383 128398382 128398490 108 TGCTGTTAATTTATTCCTTTTTATGGTGTAGTATTCCATCGTGTGTGTATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959525 32959524 32959628 61270775 61270774 61270878 104 TGCTGTTCTCTCATTCCTGCTGA--ATGCACCATTTTGCTGCAGCTGT--GTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .......xx:.:......x:.x.--:..:.x:...:::::.::xx...--...:x.:.:::..x....x.....::...:.......:.......:.x......x:.. 23M2D23M2D58M 68/104 65.4% 104/94230402 0.0% 4/104 3.8% 95438858 NA +3057 chr4 + 190214555 128398424 128398423 128398474 51 TGTGTGTATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x.......::::........:....x.x......:......... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 80308927 NA +3049 chr4 + 190214555 128398425 128398424 128398470 46 GTGTGTATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089502 48089501 48089547 46140856 46140855 46140901 46 GTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ..x.....:..:.:........:....x.x........:....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 80308923 NA +3036 chr4 + 190214555 128398444 128398443 128398483 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 38577162 NA +3358 chr4 + 190214555 128437953 128437952 128438048 96 TTTTTTGTTTGTTTGTTTGTTTGTTTTTTTGTTTG---TTCAGAATAGCTTTGGCTATTCTGGGTCTTTTGTGATTCCATATAAATTTTATGATTTTTT chr4 - 94230402 39732493 39732492 39732588 54497815 54497814 54497910 96 TTTTCTGCTTGTTTGTTTGTTTGTTTTTTAATTTAGCTCTGAGAACATTTTTAATTATTAAG---CTTCTGTACTTCCAGATTTAAGTCATGATCTATT ....:..:.....................x:...:---:.x....:.x:...:::....xx.---...:...:x.....x..xx.xx.:.....:.x.. 35M3I24M3D34M 67/93 72.0% 96/94230402 0.0% 6/93 6.5% 88705460 NA +3083 chr4 + 190214555 128511878 128511877 128511936 59 ATATATAAATATATATAAATATATATATTTATATAAATTTATATATATTTATATATATA chr4 - 94230402 43936357 43936356 43936415 50293988 50293987 50294046 59 ATTTAAAAATATCTATAAATACCTATATTTATATAGATTTATATGCCTATAAATACCTA ..x..x......x........:x............:........::x.x..x...:x.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 84575521 NA +3049 chr4 + 190214555 128585852 128585851 128585918 67 GAGACCTTGTCTCAAAACAAACAAAACAAAACAAACAAACAAACAAACAAACACAAAAAAACCACAA chr4 - 94230402 20777427 20777426 20777493 73452910 73452909 73452976 67 GAAGCCAAATCTTGAAGAAAGCAAAACAAATCAATCAATCAAACAAACAACAACAACAAAAACAGAA ..::..xx:...::..:x..:.........x...x...x...........xx....x....x..x.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 107808425 82406130 +3424 chr4 + 190214555 128607151 128607150 128607221 71 CTGTCTCAAAAACAAACAAACAAAAAAAAAATGAAAAAACACAACAACAACAACAACAACAACAACAAAAC chr4 - 94230402 20159714 20159713 20159783 74070620 74070619 74070689 70 CTATTTAATAAACAAACAAACATATAAATCGTTAAAAAACAGAACAATAACAACAGCAG-AACACCAAAAC ..:.:.x.x.............x.x...xx:.x........x.....:.......:..:-....x...... 59M1D11M 55/70 78.6% 70/94230402 0.0% 1/70 1.4% 108447437 81767118 +3295 chr4 + 190214555 128614080 128614079 128614138 59 TATTATAAATACATATATGTATGTGTGTGCACATATATATGTACATATACACACACACA chr4 - 94230402 14964811 14964810 14964869 79265534 79265533 79265592 59 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACA .:..:.::.:...x......x..:.........::.:......:...:.xx........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 113649269 76565286 +3089 chr4 + 190214555 128662535 128662534 128662580 46 CAATTACCTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCTTT chr4 - 94230402 2943233 2943232 2943278 91287125 91287124 91287170 46 CAATTATCTTTTTTTTTTTTTTTTTTTCCTGAAATTGAGACTCTTT ......:....................::...:.:x.:.x...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 125719302 64495253 +3070 chr4 + 190214555 128665209 128665208 128665279 71 AAAAGAGCTGGAAAGAAAAGAAAAGAAAACACTAAAAAAAAAAAAAAAAAGAAGAAGAAGAATAAGACAAG chr4 - 94230402 9412120 9412119 9412190 84818213 84818212 84818283 71 AAAGGAGCTGGAAAAAAAAAAAAAACCCACAAGGAAGAGGGAACAGAATAGAAGAGGAAGGACAAAAGGAG ...:..........:....:....:xxx...xx:..:.:::..x.:..x......:....:.:..:.x:.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 119253089 70961466 +3064 chr4 + 190214555 128673971 128673970 128674064 94 TCTCAAAAAAAAAAAAAAAAAATATATATATATATATATATATGTGTAGTATGTATATATATATAAAATAAAACTATTCCTTTT--TTCTGTTTTC chr4 - 94230402 69437735 69437734 69437815 24792588 24792587 24792668 81 TTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATATCT--------TACAT-------AAGTAATTCTGTTCTTTCTCACACTGTTTTC .:.x.........x........:x...................x.--------..:..-------..:...xx..:...:..:.--:x........ 45M8D5M7D19M2I10M 64/79 81.0% 81/94230402 0.0% 17/79 21.5% 59236236 NA +3020 chr4 + 190214555 128675884 128675883 128675935 52 AAACAAACAAACAAACAAAAACTATTAGTCTTTCTCTTTTTCTTTCTCTTTT chr4 - 94230402 65993838 65993837 65993889 28236514 28236513 28236565 52 AAACAAACAAACAAAAAAAAGCTATTTGACTACATCCTTTTTTCTCTTTTTT ...............x....:.....x.x..x:x..:....:.:...:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 62682046 NA +3133 chr4 + 190214555 128684969 128684968 128685093 125 TATCTAATAATTATAAATGTAGTAATAACTACTTGATACAACATAAA-CTTTTTAATCAGCGCTAATATGAAGTAATTTACACATGTTAACTCTTTCATCCTCACAACAACTCTGTGAGTTAGATT chr4 - 94230402 27733150 27733149 27733265 66497138 66497137 66497253 116 TATTTAAGTATTAAATA-ATAGTGCTTAGCACTT-CCACAACTTGAAGCTTTATAATT--------TTTAAAGCACTTTACAAATATTAACTAGTTAATCCCCACAGCAAATCTGTGTGGTAGGTT ...:...xx....x.x.-:....:x.x.x:....-x:.....x.:..-....x....:--------.x.:...:.x......x..:......xx..x....:....:...x......x.x...:.. 17M1D16M1D12M1I10M8D60M 83/115 72.2% 116/94230402 0.0% 11/115 9.6% 100951819 89262736 +3035 chr4 + 190214555 128689732 128689731 128689804 73 CAACAGAGAGAGACTCTGGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAGAAAAAA chr4 - 94230402 83348706 83348705 83348778 10881625 10881624 10881697 73 CAAATGAGAGAACTACTGGTGCATACAGCAGAAGAAAAAAAAAAAAAGAGCACAGAAAATAAAATGGGAGAAA ...xx......:x:x....:x..x.x.:x.:..:.............:..x.x......x....x:.:.:... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 45341026 NA +3163 chr4 + 190214555 128689755 128689754 128689813 59 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAGAAAAAAAAAATAATT chr4 - 94230402 13722720 13722719 13722778 80507625 80507624 80507683 59 AAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAATTAAATAACT ........:.x..............:...x..x.....::.::x.:...xx......:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 114967035 75247520 +3294 chr4 + 190214555 128700185 128700184 128700256 72 CTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:.......x.:xx...x.xx.x........:............:......x.:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 110503059 79711496 +3033 chr4 + 190214555 128747008 128747007 128747064 57 CTCAAAGAAAAAAAAAAAAAAAAAAAAGGAAGATAAAACAACTGTAAAGGAAACATA chr4 - 94230402 11065090 11065089 11065146 83165257 83165256 83165313 57 CTCAAAGGAAAAAAAGAAAAAGAAAAAAGGCCAGATGACAAATGTACAGAAAACACA .......:.......:.....:.....:.:xx.x.x:....x....x..:.....:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 117681918 72532637 +3148 chr4 + 190214555 128750385 128750384 128750432 48 TTTTTTTTTTTTTTTTCCTTTTTGAGACAAGGTCTTGCTCTGTTACTG chr4 - 94230402 5847650 5847649 5847697 88382706 88382705 88382753 48 TTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGCTG ..............:............x:xx.........:x..:... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 122902735 67311820 +3093 chr4 + 190214555 128755623 128755622 128755689 67 TTCTCCAGAAAAAGGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAGATGGGATTTCACCACTTTGGC chr4 - 94230402 40483189 40483188 40483251 53747152 53747151 53747214 63 TTCTTTGAAAGAATGGGAAAAAAAAAAAAAAAAAAGAGAGAAATAGATTGGGTCCTA----TTTGGC ....::::..:..x.::....................:.:...x....x..:.:::.----...... 57M4D6M 47/63 74.6% 63/94230402 0.0% 4/63 6.3% 88272434 NA +3618 chr4 + 190214555 128759280 128759279 128759372 93 TCTCAACAGATTTATGGGCCAGGTC-CTATTATAAGCCCAATTCTGCAGGTGAGAAAAATGAGGCACAGAGAGGTTAACTCTTTTGTCCATGGT chr4 - 94230402 10729168 10729167 10729261 83501142 83501141 83501235 94 TCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ..x...:.xx::.:..:.x:....x-:..:...x...:.x...:.:......:.....x.........x.x.......x.xx....:...x:.. 25M1I68M 65/93 69.9% 94/94230402 0.0% 1/93 1.1% 118030112 72184443 +3014 chr4 + 190214555 128762381 128762380 128762437 57 CATTACCTCTTTATTTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGAGACGAAGTCT chr4 - 94230402 61894417 61894416 61894471 32335932 32335931 32335986 55 CATTA--TTTTTTTTTTCTTTGTCTTTGTGTGCGTGTGGGTGTGTGAAAGAGAGTCT .....--.:...x..........x.x......:.....x........:.x::..... 5M2D50M 45/55 81.8% 55/94230402 0.0% 2/55 3.6% 66867964 NA +3004 chr4 + 190214555 128784886 128784885 128784949 64 GAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAGAAAAATATATT chr4 - 94230402 25738861 25738860 25738924 68491479 68491478 68491542 64 GACACTCCCTGTTAAGGAGAGTAAAAAAAAAAAAAAGAGAGAAAAAAGACTTAGAAAACATATT ..x.....:.x.:..::.:.:x..............:.:......:.:.xxx::....:..... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 103046025 87168530 +3142 chr4 + 190214555 128785644 128785643 128785721 78 CCACAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGATTACAGGCATGTGCCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA .:...:..:xx:x..:.:........::.x...x.xx.x........:..x.........:.:....--.:..::... 67M2D9M 53/76 69.7% 76/94230402 0.0% 2/76 2.6% 110588518 79626037 +3505 chr4 + 190214555 128825115 128825114 128825193 79 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTTAGCCTCTCAAGTAGCTGGAACAACAGGAATACACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCAC ..:..:..:xx:x..:.:.........:.x...x.xx.x..:.....:...............x...x.--.:...... 69M2D8M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 110627989 79586566 +3158 chr4 + 190214555 128855895 128855894 128855961 67 CTGCAGCCTTGACCTGCTGGGCTCAAGTGATCCTCCCACCTCAGCCTTTTGAGTAGCTGAGATTATA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.....:x:.x..x.....:.......x.:.x.xx:x..........::........::.:..:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 110658769 79555786 +3219 chr4 + 190214555 128873242 128873241 128873306 65 TCCTTAAGAAAAAGGAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAAGAAAAAAGAAAAAAA chr4 - 94230402 50306433 50306432 50306497 43923906 43923905 43923970 65 TCCTTGTGAGAAAAGGAGAAGAAAGAAGAAAGAATAATAATGATAAAGAACAAAGAAGAAAAAAA .....:x..:...:.:.:..:...:..:......x..x.:x:.x...:..x...:.......... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 78566809 NA +3183 chr4 + 190214555 128877231 128877230 128877311 81 GAAGTAGGCACTATTATCTCCAATTTACAGATGAGGAAACTGAGGCACAGAGAAATTAAGTAATTTGCTCAAGGTCAGTAG chr4 - 94230402 73290461 73290460 73290534 20939869 20939868 20939942 74 GAAGACAGCACTGTTATCCAGCTTTTATAGATGAGGAAAATAAAGCACTGGGAAATTAAATGA-------AATATCAGTAG ....xx:.....:.....:xxxx....:...........x.:.:....x.:........:.:.-------..x:....... 63M7D11M 55/74 74.3% 74/94230402 0.0% 7/74 9.5% 55586770 NA +3036 chr4 + 190214555 128877232 128877231 128877293 62 AAGTAGGCACTATTATCTCCAATTTACAGATGAGGAAACTGAGGCACAGAGAAATTAAGTAA chr4 - 94230402 73089440 73089439 73089501 21140902 21140901 21140963 62 AAATGGGCATTAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAA ..:.:....:..x.:..:.::x...::....x......x..........x..::.x..:... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 55787792 NA +3003 chr4 + 190214555 128883142 128883141 128883177 36 CAACAACAACAACAACAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 29762489 29762488 29762524 64467879 64467878 64467914 36 CAACAACAACAACAACAGCAAAAAAAAAAAAAAAAA .................:x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 99120653 91093902 +6703 chr4 + 190214555 128890957 128890956 128891198 242 TTTCCAAGTAGAGAAATA-ATTTGGATTTGGCTCAGGTAAAATTCTATAACATGTGTATCATGCTGCAGCAGAAAGCACTTCCCAGGGGAGTCATTA-TCTCACCTCAGCTACCTTTTCATTTGCCATTTCCAGCTGAGAAAGCAGCTCTTGGGTATGAAGTTTCTGTCGACTCAGCTCACTCCTATTAAGA-----------GCACCAAAAAATCCATTAATATAATTGTT--CCAAATAGAAAACAGAATCTTTA chr4 - 94230402 59048615 59048614 59048864 35181539 35181538 35181788 250 TTTTTAAGACCAGAAACATATCTTAATGGGCTTCTGTTACCATCCTGGTGTATTTGCATCAGGTTTTAACTGAAAGCAATTGTC-------CTATTACTCTTACCTCAATTACTTTATTGTTTGCCATTTCCAACTGAGCAATAAGCTCCTGATTACGAAGTTTATGTTGACTCAGATCACTTCTATTAATAAGAAGAAAATGGAAAAGAAAAAACATTTAATCTAAAAAACAAACAAACAGAAAATAAAACTTTTA ...::...xxx.....:.-..:.x:..xx.x:..x.x..xx..:..:xx::..x..:....x.:.x:.:.x.......x..x:.-------::....-...:......::...:..x.::.............:.....x..xx.....:..:x..:.......x...:.......x.....:.......x.-----------.x.xx:.....x.xx.....x...xx:x:--x....:......:.:..::.... 18M1I65M7D6M1I94M11I29M2I23M 160/235 68.1% 250/94230402 0.0% 22/235 9.4% 69842342 NA +3600 chr4 + 190214555 128891702 128891701 128891802 101 TGGCATGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGGTCAAGTGATTCTCATGCCTCAACCTCCCGAGTAGCTGGGACTACAGGCTTGCACCACCACG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ......x..x..------..:..:..:xx:x..:.::..x.......x...x..x.x....:...::.:.........:......--.x........:::. 12M6D67M2D14M 67/93 72.0% 93/94230402 0.0% 8/93 8.6% 110694588 79519967 +3200 chr4 + 190214555 128929742 128929741 128929800 59 GGAAAAGAGAGACTTGTCATTAAATGTTTCAGGGATGAATGGCTACAACATGGGAAAAA chr4 - 94230402 53521967 53521966 53522025 40708378 40708377 40708436 59 GAGAAATGAAGAGTTGTTGTTAAATGTTGTTGGGGTGAATAGCTACAGCATGGGAAGGA .::...x::...x....::.........x:x...:.....:......:........::. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 75407775 NA +11039 chr4 + 190214555 128936619 128936618 128936870 252 CTGTAAAACATGTCAAACAACTAACA---GTAGACTTACTTTAGATTATTGATTCTAATTTCTGCACTTTCAGTAAGTTTCTTCGTTTCTTCTTTCCACCTATTGGCTGCCTTCTGTTGAGTCGCTAGGAGATGCCTCAGTTCAACAATGGAATTTCTATTACTGTCTTCCATCTCTCTCAATTGAACTTCAAATCCACGTTCCTTTATTGAAAATTCATGTTCCATTGTACTGATCTAAAGAATAAAATGAAAA chr4 - 94230402 59049564 59049563 59049818 35180585 35180584 35180839 255 CTGTAACAGCAGCCAGAAGAACAACACAATTGCACTTACTTTAACTTATTGATCCTAGCTTCTGTAGTTTCAGTAAGCACTTTTGTTTCCTCTTTCCATCTATTTGTTGCTTTTTGCTGAGCTACCAACAGATGTCTGAGTTCAGCAGTAGACTTTTGACTCATGTCTTCCATTTCCTTAAGACGAACTTCATATCCGTGTTCTTTCACAGCATGCTCATGCTCCATAGTGCTTATCTACATAAAAAAATACAAA ......x.xxx.:..:.x:.x:....---x.:x..........:x........:...::.....:.x..........:x::..:.....:........:.....x.:...:..:..:....:::.:.:x.....:..x......:..:.:..x...:x.:.xx..........:..::.x.:x:........x....::....:..:.:x.x.x::.....:.....x..:..x.....x.x..x.....:x... 26M3I226M 176/252 69.8% 255/94230402 0.0% 3/252 1.2% 69887055 NA +3253 chr4 + 190214555 128937261 128937260 128937334 74 GAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAGAAAAAAGAAAAAAG-----AAATTAAGTTTACAATTGGTCTTCATT chr4 - 94230402 41477419 41477418 41477497 52752906 52752905 52752984 79 GACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGTGGTATGACTTTAGACTTAATCATCATT ..x...x.:.....x.:....................::........-----::xx.:.x....x.x..::..x..... 47M5I27M 56/74 75.7% 79/94230402 0.0% 5/74 6.8% 87459842 NA +9211 chr4 + 190214555 128942974 128942973 128943192 219 TTAACTCTAGTCTTGAAAA----TACCTTTACTTTGGCTTTTTTTTGAGCCTCCAGGGCAATCTTCCTTAAACTCTCAGTCTCTTTCCGTAACTGTTTATTTTCTTGCTGAAGTTTTAGCCTTTGTTCACTGACAAGCCCACAGTTCTCTCTCTCAGACTCCAATACATTTTGAAGTTTCTGAATCATTTCTTGGTAACGTGATATTTCTTCTGAGGAGCTGA chr4 - 94230402 59051289 59051288 59051511 35178892 35178891 35179114 223 ttgattacagtgttacaAAACCATACCTTTATCTTGGCTTTTTGCTGTGCCTCTGTGGCCAGTTTTCTTAAGCTTTCAATTTCTTTTTGCAATTGCTCATTCTCTTGCTGAAGCTTTAACCTTTGTTCACCGATGGAGCCACTCTTTTCTCTTTCTGAATCCAGAATGCTTTGCAAGTTACAGATGTTTTTCTGGTAATTAGATTTCTCTTCCTCAAAGCTGA ..:.:.x:...x..:x...----........::..........x:..x.....::x...x.x:..:.....:..:...:.:.....::.:..:..:.:...:...........:....:...........:..::::x....xx..:.....:..x..x....:x.:::....x.:x..x:::..xx...::......:xx...x.:.....:xx::...... 19M4I200M 149/219 68.0% 223/94230402 0.0% 4/219 1.8% 69891685 NA +6227 chr4 + 190214555 128946001 128946000 128946160 160 ACTTACTCAGTTTCAAGTTGTTTTATTCTATTTTCTGCTCTCGTAAGTCTTAGCTGAAGATCATCTTTTGAACGCTCTGAAACCAGGAATCTTTGGTGCATTTCTTCCAGTTTTCTGTAATCACTCTCATTTCCTCTGCCTTCACGGTAAATCTGCAGAA chr4 - 94230402 59053184 59053183 59053343 35177060 35177059 35177219 160 ACTTACTTCATTTCCAGCAGCTTCAGTTTATGTTGTGTTGTCTGCAGACTCAGCTGAAGGTCACATTTTGTAGTCTCTGCAAGCAGATATTTCTGATGCAGCTGCTCTAGTTTTCTATTGTCAGATTCATGTCCTCCGTATTCTCTGCAAATCTGAAGAA .......:x:....x..:x.:..:.x.:...x..x..:.x..xxx..x..:........:...:x.....x.xx.....x..x...:x..:.:..:....x:.x:..:........:.x:...xx:....x.....:.:x...x.x.:.......x.... 160M 109/160 68.1% 160/94230402 0.0% 0/160 0.0% 69892817 NA +3257 chr4 + 190214555 128948318 128948317 128948418 101 AGAGTGAGACTCCATTGCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAACTTACCAGGACAATACTAACAAATAAAGGAATTGCTAGTAGAT chr4 - 94230402 72165074 72165073 72165169 22065234 22065233 22065329 96 AAGGTAAGAATTTTCTGCACGATGACCAAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATA-----AGGAGAAAGAATTATAAATATAT .::..:...x.::x:....x:.x:.xx....x.....x..:......:..:.:..........x....x....-----.::x:..:.....::x.:..x.. 73M5D23M 64/96 66.7% 96/94230402 0.0% 5/96 5.2% 56783244 NA +5892 chr4 + 190214555 128948492 128948491 128948597 106 TTACCTTTTCTAGTTCTTCTTCCACTGCTTTTTTTTCCTTAATGACTCGTTCAATTTGGCCTTGTTTTTCAGCACACTCCTATAAATTCAAGTCATATTGTAAATA chr4 - 94230402 59053849 59053848 59053951 35176452 35176451 35176554 103 TTACCTTTTCAAGTTCTTCTTCCACTGCTCGCTTTTCTCTAATGGCTCGTTCTATTTGACCTTGCTTTTCACCGCATTCCTAT---TTCAAAAAGTCATTTAAATA ..........x..................:x:.....::.....:.......x.....:.....:......x.:..:......---.....:xx:.xx.x...... 83M3D20M 83/103 80.6% 103/94230402 0.0% 3/103 2.9% 69894643 NA +4831 chr4 + 190214555 128952757 128952756 128952855 99 AGTCAAA--CATACCATTTGAAGGGCTGAAAGTTCTTCTGTTAATCGAGAAATTTGTATATTACATTGTTTTTTGGTGTTTGCAACCTGTAAATTAAGACA chr4 - 94230402 59054990 59054989 59055090 35175313 35175312 35175413 101 AGTCAAGTTCATACCATATGAAGTGCTAAAAGTTCTTCTGTTAATTGAGAGATCTGCACATTGTATTGTTTCTTTGCAGAGTCTACCTGTGATCAAAAACA ......:--........x.....x...:.................:....:..:..:.:...::.......:..x.::xxxx.x......:.x:x..:... 7M2I92M 74/99 74.7% 101/94230402 0.0% 2/99 2.0% 69897767 NA +9912 chr4 + 190214555 128959559 128959558 128959818 260 AACATTTTATTATATCTAA---ACATATTTACTAGCTTTCTTACCTGACTTTTTTGAAGGTTAGCTTCTTCTAAGAGTTGCATGCTATTTCTGGCTCTTACAATAGCCTCATATCTCTCATTTTCTAATTCATTGCACTTTGCTTGTAGCTCTCTGGTCTGTTTTTCCAGATGTGTATTTTCGGTTCTTAATTGGTTGGCTTCTTGGATTGTCACACATAATCTAGAAATCAATAATTACACTGGGAAAGTTAAACTTTTTTA chr4 - 94230402 59059369 59059368 59059628 35170775 35170774 35171034 260 AAAGTTTTCTAATATCTAAGAAATGCCTTCACCTG-TGACTTACCTGACTTTTTTGTAGGTTAGCTTCTTCTAACAGCTGTACGCAATCTTGAACCTTTGCAACTGCCTCATACTTTTCCCTTTCTAAATGAGCACACTTTGTCTGAAGCATTCTGATTTGTTTCTCCAGGGCTGTTCTTTCTGTTCTCAACTGTTCAGCATCTTGGACGGTAACATGTAATCTA-AAACAAATGAATACAAAGCTTAA-TTAAATCTCTTTA ..x:....x.x........---.:::x..:..:x.-.xx.................x.................x..:..:.:..x..:.:x::.::..:...:x........::.:..x:.......x.x.x::.......::..x...x:....:.:.....:.....:xx...x:....x.....:..:..x.::..x.......:x..x...::.......-...:x...:.x....xx.xxx..-.....::.:.... 19M3I13M1D189M1D23M1D13M 181/257 70.4% 260/94230402 0.0% 6/257 2.3% 69900190 NA +7021 chr4 + 190214555 128965146 128965145 128965325 180 AGTAAATATCACACACTGAAACTCTATTGTAAAATATCTTTTAAAGCATATCAACAAAGCTAGGTGCATTTAACA---ATTTACCTTATTTCTAATTGTTTTATACTAGACTGTAACTGCTGTAAACGCCTATCTGATGCTTCCTCTCTTCCATGGGCAGACACCACATCCTTCTCCTAGAAA chr4 - 94230402 59059658 59059657 59059836 35170567 35170566 35170745 179 AATAAGTTGCCCAAACTGTGTTCCTATTTGGGATTTTTTTTTTGTACATATCCC----ATTAGTAACATCCAACATGTCTTTACCTTGTTTCTAATTGTTTTATACTAGACTGCATTTGTTGCAAGAGTTTGTCAGATGCTGCTTCTCTTTGCTGGGCAGACACCACATCTTCTTCCTAGAAA .:...:.xx.x..x....x:x::.....xx::.x.x.:....x:x:......xx----::...xx:...::....---x........:.........................:.x:..:..:..:x.::.:..x......x.:......:xx.................:.::......... 54M4D17M3I105M 124/176 70.5% 179/94230402 0.0% 7/176 4.0% 69905488 NA +3331 chr4 + 190214555 128965915 128965914 128965989 75 TCTGCTGCCCA---------GGTTCAAGTGATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCTACTGTG chr4 - 94230402 18197125 18197124 18197206 76033197 76033196 76033278 82 TCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ...:.x.....---------..........x...x.xx..........::.:.........:.:....x.::.--:.:...... 11M9I53M2D9M 57/73 78.1% 82/94230402 0.0% 11/73 15.1% 110768790 79445765 +3404 chr4 + 190214555 128966185 128966184 128966248 64 AAACTCCTTGGATCAAGTGATCCTCCTGTCTCAGCCTCTCGAGTAGCTGGGACTATAGATGCAC chr4 - 94230402 18197136 18197135 18197199 76033204 76033203 76033267 64 AAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..x..x.......x.:.x.xx.x........:..:.........:....:.x:..... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 110769049 79445506 +3171 chr4 + 190214555 128973428 128973427 128973486 59 GGGAGGGAGAGGGGAGGGGAAGGAGTAGTGGGAGGGAGGAGAGGGAGAGGGAGGGAGAG chr4 - 94230402 7707310 7707309 7707368 86523035 86523034 86523093 59 GAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGG .:.x..:..:....xx...:.....x.:x..........:..x..........::.::. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 121266118 68948437 +3129 chr4 + 190214555 128997358 128997357 128997425 68 TTCCAAGA-AAGTAAAGAAAACAAAAGTGAGAGAATAAGAAGGTAAAGAGCAGAACTGGAAAGACTAAT chr4 - 94230402 28315465 28315464 28315533 65914870 65914869 65914938 69 TTACAAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGGAAAGAACAAT ..x.....-..:x...x....:....xx.x..:..:...:.:........x.....x.......x:... 8M1I60M 52/68 76.5% 69/94230402 0.0% 1/68 1.5% 100681893 89532662 +6382 chr4 + 190214555 128999651 128999650 128999874 224 AATGATGAAATCCAAGATTACCTTTTGTTTTTGACTTTCAAATACATGAATCTGGGCCTCAGTCATATGTTCCTGGTAAAGCTTGTGTAGTCTGTCCAACTCCTGAGAAACAGTCTGCCAGAGTTCCACAGCCTGAGTTTTTTCCTATTAAAAAAGTTTGATAACTCATTAAATTATCAGCAGGCTATTTATTGTATAGTACAAATGGATCATTTTCTTTTATA chr4 - 94230402 59065182 59065181 59065395 35165008 35165007 35165221 214 AAAAATGTAAATGAAAGTTACTTGCTGTTTTAGTCTTTCAGCCATGTGAATTTGTGTTCGAGTCATGTGTTCCTGGTACTGCTGCTGGAGTTGATCAAGCTCCTGTGATACAGTCTGCCAGAGCTCTATTGCTTGTTCTTTCTCCT----AAGAAGTTAAAGA----ATAAAGGCGTC--TAAGATATTTACAGTACATTTCTATTGAAATTCTTTTTTTGGTA ..x:...x..x:x..::....:.x:......x.x......:x:.::.....:..x.:::x......:...........xx...xx..x...:x:..x.:......x..x..............:..:.:x..:..xx:...:....----..:.....x:.x.----..x..:x::..--:.:.x......:x...:.x.x.x.x..:.x:x:...:...x:.. 146M4D13M4D11M2D44M 141/214 65.9% 214/94230402 0.0% 10/214 4.7% 69934469 NA +3152 chr4 + 190214555 129003369 129003368 129003492 124 CATGTGATACCTATATAACAAACCTGCACGTTCTGCACATG-TATCCTAGA-ACT-----TAAAGTATAATTAAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAGAAAAAATATTCTCATAAGAAAAAAA chr4 - 94230402 25738812 25738811 25738939 68491464 68491463 68491591 128 CATATGTTACTTAAAAAGCCAGTTTCCAGACTCACCTCATGCTGTCCAAGACACTCCCTGTTAAGGAGAGT---AAAAAAAAAAAAAAGAGAGAAAAAAGACTTAGAAAACATATTTCTTTAAGAAAATAA ...:..x...:..x.x.:.x.:::.x..x::..xx.x....-.:...x...-...-----.x...x.x.:.---............:.:.:........:.xxx......x.....:::x........x.. 41M1I9M1I3M5I11M3D57M 85/121 70.2% 128/94230402 0.0% 10/121 8.3% 103264557 86949998 +5720 chr4 + 190214555 129003729 129003728 129003878 150 CATGTCACTCACTTGATTGGCTAGCTGCAATTGTTCTTGAAGGTTTCTGACTGTTTCATCATCTGCATATATGTCAGTTCCTACCTCTGTGCCCAGGGGAAAGGCCTCCAATTTTTTTTCAACAGCATCTTTTAATTCACTGTGCAACCT chr4 - 94230402 59066104 59066103 59066250 35164153 35164152 35164299 147 CATCTGACACACCTGATTAGTCAGTTGTAGTTGTTCCTGAAGGTTTCTCAGTATTTCTTCATCTGCAGGAATAGCAGTTCCCAGAGGCGTG---AAAGGAAGAGCATCCAGCTGCATCTCAAGAGCCTCCTTCAACTCTGCATGCAGCCT ...x.x..x...:.....:.::..:..:.:......:...........x.x.:....x.........x:x..:x.......:.xxxx:...---.::....::..x....::.x:x.:....x...x..:..:..:..xx::....:... 91M3D56M 100/147 68.0% 147/94230402 0.0% 3/147 2.0% 69937625 NA +3280 chr4 + 190214555 129053560 129053559 129053650 91 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAAATATTCCCCCATCCCTTTATTTTGAGCCTGTGTGTGTCTT chr4 - 94230402 13027550 13027549 13027631 81202772 81202771 81202853 82 TTTGTTTTTTTTTTTTTTTTTCCTCTCTTCTGCTTCTCCTTTGTTTATTAAATGAT---------TTTTATCTTGACCCCCAGCTTGACTT ...x.................::.:.:..:.....::.x....:..:x.....:x.---------:.....:....x..:xx.:x..x... 56M9D26M 59/82 72.0% 82/94230402 0.0% 9/82 11.0% 116026010 74188545 +3082 chr4 + 190214555 129086272 129086271 129086341 70 ATTTGCGTTTCCTGGATACCTGAAGATGCTGGTGTATGTATGTATATATATATATATATATATATACACA chr4 - 94230402 10898921 10898920 10898990 83331413 83331412 83331482 70 ATTTATTTCTGCTACAAACGTAAAGCTTCTATTTTATGTGTGTATATATATATACACATATACACACATA ....::x.:.x..:x.x..x.:...x.x..:x.x.....:..............:.:.....:.:...:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 118187351 72027204 +3329 chr4 + 190214555 129100234 129100233 129100297 64 CAAGCTTGTCCAACCCAAGGCCCATGGACTACATGTGGCCCAGGACAGCTTAGAATGCAGCCCA chr4 - 94230402 53534114 53534113 53534170 40696233 40696232 40696289 57 CAGGCATGTCCAACCCA-------TGGGCCACATGTGGCCTGGCACAGCTCACAGTGCAGCCCA ..:..x...........-------...:.:..........::.x......:.x.:......... 17M7D40M 47/57 82.5% 57/94230402 0.0% 7/57 12.3% 75566120 NA +10031 chr4 + 190214555 129102609 129102608 129102807 199 AGATGGATTTTAAAATTGAACACACTTGGGATGGTTTTCCAGTGAAGCATGAGCCCGTATTTATCAGGCTGAATCCAGGTGACAGAGGAGTGATGATGGACATTAGTGCTCCATTTTTCAGGGATCCTCCAGCCCCACTTGGAGAACCAGGAAAACCTTTCAATGAACTGTGGGATTATGAAGGTAAGTGGAAGTACTG chr4 - 94230402 59070660 59070659 59070858 35159545 35159544 35159743 199 AGATGGAGTTAAGAATTGAGCACACGTGGGACGGTTTACCCGTGAGCCATGACCCAGTAACAATTGCACTGAAGTCGTATGATGCAGGACTGCTAATGCAAGTTAGTGCTCCCTTCTTCAATGATCCTCCAGCACCGCTTGGAGAGCCAGGGAAACCCTTTAGAAAGCTGTGGGACTACGAAGGTAAGCGTAACTTCTG .......x..x.:......:.....x.....:.....x..x....:x.....x..x...x:x..::x:.....x:.:x:...::x....x..x.:...x.x:..........x..:....:x...........x..:........:.....:.....:..:.:x:.:........:..:.........:.x..x.x... 199M 146/199 73.4% 199/94230402 0.0% 0/199 0.0% 70031949 NA +5794 chr4 + 190214555 129106569 129106568 129106664 96 TATCTCTGTTTTCAAAAGTTGTGGAAGCATTTTTCTTGAATGATATAACTGAGCAATATTTAGAAGTTGAACTTTGTCCGTAAGTATAAAATGTTT chr4 - 94230402 59071357 59071356 59071448 35158955 35158954 35159046 92 TGTCTCTTTTT----AAGTTGTAGAAGCATTTTTCTTGAGTGACAGGAGTGAGCAGTATCTAGAAGTTGAACTTTGTCCGTAAGTACAGCTTGCTT .:.....x...----.......:................:...:.x:.x......:...:..........................:.:xx..:.. 11M4D81M 77/92 83.7% 92/94230402 0.0% 4/92 4.3% 70035212 NA +14130 chr4 + 190214555 129109292 129109291 129109684 393 TCTTAATTTTGACAGCCACGGACAGCATTTAGTGCTTTTACTTTCTGGAAGAAGAAATGTGTGGAAAGTAAGTAAATAAAAATAGGAGGCAAAATCATTACGTACACAG--TAATACACATATTTCTA------TGTT--TAAAGTGTAAGCCCAATTTTATCTTTTGTGTTTCACATGTTGTTTCTG-TAGCAAGAACTTCCTTTATCGTTCAGAATGTCCAGAGGAGAGACAAAATGGGAAGGCAAAGCTTATCTCCCTTGGAGTTATTTTCCACCAAATGTGACAAAATTCAATTCATTTGCAATTCATGGATCAAAAGATAAACGAAGTTATGAAGCTCTTTACCCTGTACCTCAGCATGAACTGCAGCAAGGACAAAAACCTGATTTGTAAGTAGAAAA chr4 - 94230402 59071610 59071609 59071996 35158407 35158406 35158793 387 TCTGATTTTTGACAGTCACGGACAACACTTACTGTTGCTGCTTTCTGGCAAAAGAAGAGTGTGGAAAGTAAGTGATCAAGGGCAT---------TCATAATGCACAGAACCTAAT-----TGTTTTTAGATAGCTGTTGGTAGATTAAAAGATCAATAGCATTCTTT---TTCCCCCCCTCATGTGTAACAGGAAGAACTTCCCTTAGAATTTGATGTGACCAGAACAGAAACCAAATGGGAAGGTACAGCTCATCTTCCTTGGAATTATTTTCCGCCGGGCACTAACAAGTTCAATGCATATGCAATCTATGGCTCAGGAGAACACAGAAAATATGAAGCACTTTATCCTGTGCCTCGCCACAAGCTTCAGGAAGGACAGAAACCAGATTTGTAAGCATAAAA ...x.x.........:........:..:...x..:.x:.:........x.:.....:x...............:.x:..::::.x---------....x.:.:...x.:--....-----.:...:..------....--..:.x.:x...x:....xx:..::...---..:.x.x:x.::.x.x.:-:..x..........:...xx:..:::x:..x.....:x...:..x...........:.x....:....:.......:.........:..::::::x.xx..:......x...x......::....x...::...xx.xx...:x........x.....:.....:....:x..::.:..x...x.......:.....x..........:.x.... 85M9D15M2I4M5D8M6I4M2I27M3D18M1I215M 267/376 71.0% 387/94230402 0.0% 28/376 7.4% 70037682 NA +3213 chr4 + 190214555 129143645 129143644 129143741 97 GTTTTTTTTTTGTGTGTATGTGTGTGTGTGTGTATATATATACATATATATTCATATATATATGAATCTTGCTTAAGACGTTTCATACCAGAGAACA chr4 - 94230402 19559284 19559283 19559371 74671032 74671031 74671119 88 GCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATAT-----TCTtgt---ggtgggttcacactggtggaca .:.x.......x.....:.........:.:.:............xx..-...:x.:.....-----.....:---:.xx.x....:..::.x.:... 48M1D12M5D6M3D22M 66/88 75.0% 88/94230402 0.0% 9/88 10.2% 109584361 80630194 +5823 chr4 + 190214555 129146734 129146733 129146899 166 ACATGGAACAGTACACCAGTGATACACAGGCCTGTAACTCTCACATTTAAACCTGGGGCTTGAGGCTTACTAATGGAAGTGAATGCTCCAATTTTCAATGATCCCCCAGCACCATCAGGGGGCACCAGGGCAACCTTTTAATGAACTCTAGAAGTATGAAGGTTAG chr4 - 94230402 59070683 59070682 59070847 35159556 35159555 35159720 165 ACGTGGGACGGTTTACCCGTGAGCCATGACCCAGTAACAATTGCACTGAAGTCGTATGATGCAGGACTGCTAATGCAAGTTAGTGCTCCCTTCTTCAATGATCCTCCAGCACCGCTTGGAGA-GCCAGGGAAACCCTTTAGAAAGCTGTGGGACTACGAAGGTAAG ..:...:..:..x:...x....xx..:::x..x.....xx.::..:.x..::.xx:x.x.xx...x:.:......x....x.:......xx.:...........:........:::x..:.:-:......x....:....:x:.:..x.:.:.x..:......x.. 122M1D43M 108/165 65.5% 165/94230402 0.0% 1/165 0.6% 70076051 NA +5769 chr4 + 190214555 129177374 129177373 129177633 260 TTTTCCCC--------TGAGAAAGAAAGAGCTGAACTTACAATTTAAAGTCAACATTACTTGGAACCAGTGAAATGGGATTGCATTTCTTCCTTGGGAATATTTTCCACTTGGTATTGACATGATGAATTCATATGCAATTCATGAATCTGGTATTGGAAGTATTTATGAAGCCCTTTATTCAATACTGCATGAAGAGATTGAGGATGGGCAATGTCCTAATACGTCAGTATGCAACAAG-AATTTGATTACATATTTACTTTCAGCTT chr4 - 94230402 59071761 59071760 59072029 35158374 35158373 35158642 269 TTTTCCCCCCCTCATGTGTAACAGGAAGAACTTCCCTTAGAATTTGATGTGACCAGAACAGAAACCAAATGGGAAGGTACAGCTCATCTTCCTTGGAATTATTTTCCGCCGGGCACTAACAAGTTCAATGCATATGCAATCTATGGCTCAGGAGAACACAGAAAATATGAAGCACTTTATCCTGTGCCTCGCCACAAGCTTCAGGAAGGACAGAAACCAGATTTGTAAGCATAAAAGTAGTTGTTCTGTAATATATTTGCACTCTTCTT ........--------..x:.x..:....:..xxx....x.....:.x..x.x..xx..xx::.x.x.:..::.x..x.:x..x:x..........:.x........:.:x..:.:.:...x.x.x...x..........::...:x..x..x:xxx:x..x.xx........x......:.x:.:.:x.::x.x:..x..x....x..:..:x:x..x:..x:..x..:..:x..xx..-x:..:x:.x.:......:.x:..xx... 8M8I224M1I28M 160/260 61.5% 269/94230402 0.0% 9/260 3.5% 70105613 NA +3049 chr4 + 190214555 129213013 129213012 129213075 63 ATAATCAATCTCCTATTTAAAACAATATATATATACACACACACACACACACATATATATAGA chr4 - 94230402 21704649 21704648 21704711 72525692 72525691 72525754 63 ATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAA ...:.x..x:.:.xx.xx.....xx.........::.................::.:....:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 107508364 82706191 +3049 chr4 + 190214555 129213013 129213012 129213075 63 ATAATCAATCTCCTATTTAAAACAATATATATATACACACACACACACACACATATATATAGA chr4 - 94230402 21701076 21701075 21701138 72529265 72529264 72529327 63 ATAGTAAAATTTCACTAGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAA ...:.x..x:.:.xx.xx.....xx.........::.................::.:....:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 107511937 82702618 +3101 chr4 + 190214555 129213023 129213022 129213063 41 TCCTATTTAAAACAATATATATATACACACACACACACACA chr4 - 94230402 57092700 57092699 57092740 37137663 37137662 37137703 41 TTCAATTTAAAACAATATATATATATACACGCACACATACA .:.x.....................:....:......:... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 72120323 NA +3001 chr4 + 190214555 129213037 129213036 129213084 48 ATATATATATACACACACACACACACACATATATATAGATAGATAGAT chr4 - 94230402 21704675 21704674 21704722 72525681 72525680 72525728 48 ATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGAT ........:...................:.:....x.:xxx:...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 107508362 82706193 +3001 chr4 + 190214555 129213037 129213036 129213084 48 ATATATATATACACACACACACACACACATATATATAGATAGATAGAT chr4 - 94230402 21701102 21701101 21701149 72529254 72529253 72529301 48 ATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGAT ........:...................:.:....x.:xxx:...... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 107511935 82702620 +3042 chr4 + 190214555 129232010 129232009 129232083 74 ATTTGGTAGAACATACTGAAATAAATCAGCAGCACTGCCAAAAAAAAAAAAAAAAAAGATTTATAGGAGTTTCT chr4 - 94230402 18201692 18201691 18201765 76028638 76028637 76028711 74 ATTTTATAGATTGTTATAAAATAGATCAACAGCCTTTCAAAAAAAGAAAAAAGAAAAGAAATATGAAATATTCT ....x:....x::.xx.:.....:....:....x:.x.x......:......:......xx...:::.xx.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 111030318 79184237 +10278 chr4 + 190214555 129234335 129234334 129234633 299 TAAGTATGTCTGGACATTCATTTGGAACATTTCATCTACTGAATTTTTCTTCATGGAAATTTGTTAAGAGGTCCTGCCTTTCTATTTTCATGACAGAGACTATCAAT-CAAAGTGACTTCTTCTTGATTATCAGAGAGCCCTATGAACATATTAGAGAAATCTTTAATTACTATTAAATGCCTGCCAAACATGGGCACAGGAAAAAATCACTCAGTCAATCAAAGTAGAAGCTTGGTGTGGACTCTGAATTTTAATGAGAAGACAGAGCAGAGTTGTAAAGGGAAT--CTTAGGTAGGAAAG chr4 - 94230402 68901057 68901056 68901345 25329058 25329057 25329346 289 TAAAAATGTCTCTGTCATAGTCTGGAACAT--CACCTA--GAGCTTTTCATCAATGAGATTTACTCAAAGTTTTTATCTTCTGGTTTTCATGACAGCAACTATCAATTCAAAGT--------CTTTGTTATCTGTGTACCCTTTGAATAGACTAGAGAAGTCTTTAATTACTATTAAATGCTTGCCAAGAGTAGACATAAGAGGAAA-AAATCTGTCAATCAAGGTGCAAGTCTAGTGTAGACAGTGAATTATAGTGAGAGGACACTTGAGAGAAGCAAATAAAATAAATTAATTGGAAAAG ...:x......xx::xx.x:.:........--..:...--..::.....x...xx..:....::.x.:..x.::.::...::x:............x:.........-......--------...x:.....x.x.x:....x....:.x.:.......:.....................:......:x:.:.:..:.:..::...-x.x..x.........:..:x...::.:....:...xx......x..:.....:....xxxx....xx.:...x::...--x...:x.:.:.... 30M2D6M2D67M1I6M8D85M1D78M2I14M 202/286 70.6% 289/94230402 0.0% 16/286 5.6% 60333278 NA +6150 chr4 + 190214555 129245104 129245103 129245251 148 TGAAACCAGATTCATAGCAGTAGAAGGACTCTATAAACATAATTCACTGAAATGAGAGGGTGATAAAAAGG----TCCTTTTTCTTGCCT-----------------------TTTGCAGGGATAAATTACACCTGAAGCTACAGAAATGTTCTTTTCTAGTTTCAGATTAAGTG chr4 - 94230402 68901803 68901802 68901973 25328430 25328429 25328600 171 TGAAAGCAAATTCTTAGTTGTTAGGGAGCTCCATAAACATAATTCACCGAAATGAGAGGGTGATAAAAGAACTTTTCTTTCTTCACACCTACTCTGCCTCACCCCCCCAAAACCTTGC----ATAAATCATAGTGAAATCTACAGAGATGTTCCTTTCGAGTTTGAGAGTAAGTG .....x..:....x...:x..x:::.::...:...............:....................:::----..:..:...x::...-----------------------:....----......:.:.x:x:..x.......:......:....x.....x...x...... 71M4I15M23I5M4D53M 110/144 76.4% 171/94230402 0.0% 31/144 21.5% 60343301 NA +3225 chr4 + 190214555 129245456 129245455 129245530 75 TATATATATACACACACACACATACATATATGCATATACATATGTATATTCTTTAAAACTCTGTGTATTCTGATT chr4 - 94230402 50941868 50941867 50941942 43288461 43288460 43288535 75 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTT ..x..x.x..:.:.::....x.:............x..:.:........x:...:..xx:x.::.......:x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 78303588 NA +3073 chr4 + 190214555 129256393 129256392 129256454 62 CTGTCTAAAAAAAAAAAAAAGAAAACACACACACACACACACACAACAAAAACAAAAAACAA chr4 - 94230402 10081041 10081040 10081102 84149301 84149300 84149362 62 CTGCCTGGAGAAAACATAGGGAAAAGACACACACACACACACAGAAAAGCAATCAGAAGCAA ...:..::.:....x.x.::.....x.................x..x.:x..:x.:..:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 119175352 71039203 +3456 chr4 + 190214555 129326982 129326981 129327132 151 TTTGTCCAGTCCTGTTTTAAATGACCCAGGCAATGGAGCTCAATCCTTTTCCCTTGAGAGGCCATTTGGCAGTCTAATAGGCTTTGCTGTTAGCAAACTCTTCCTTGATGTGCTGCCTAAGTTTTCCTTTGCTCAATTTCATCTCATTACT chr4 - 94230402 44882393 44882392 44882542 49347861 49347860 49348010 150 TTTGTCCAGTGAAAACTGAAAGGTGTTCAGGGATGAGGTTTCTCCCCGCTCCCCAGAGTGATTACTCTCCTCTCTCATATATCTCATCATTTGGAAGATTTTCCT-GCTGTTCAGCCTACGTTTTCCGTTTCTTAATTTCATCCCATTACT ..........xxx:x:.x...x.xx::x:.x:...::.:.:xx:..:x:....:x...x.:::.:.:xx.xx...x...x:::.:::::..x.x..:x.:.....-.x...x.x.....x.......x..x..:.........:....... 105M1D45M 89/150 59.3% 150/94230402 0.0% 1/150 0.7% 84444589 NA +3267 chr4 + 190214555 129352299 129352298 129352390 92 TTATTCTGTTC---TACAATTCAAACAATGAAT--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCACAGAGGCCTTTGAAAATCTTAC chr4 - 94230402 14063829 14063828 14063924 80166479 80166478 80166574 96 TTATCCTGCTTAAATGCAACACAAACAA-GATTGGTATCCTTCTTTCTTTATTATTTTTTTTTTCTTTTCTGCCACAGTAATCTTTCAGAAGGTTAC ....:...:.:---.:...:x.......-..x.--.x.::..:...:...x..x..........:....:........x:::....x.:..xx.... 11M3I14M1D4M2I62M 67/91 73.6% 96/94230402 0.0% 6/91 6.6% 115288470 74926085 +4029 chr4 + 190214555 129430942 129430941 129431070 129 GCAGTAATTGGTAAGTATATTTCTGCCTGTAATCAATAGCTTTTACATTCAACGTAATATTTCTAAACAAAAAGAAATATTACATTCAATGTAAAAGCTATTGATTGCAGAGAGCAAATGTCTTTTCCA chr4 - 94230402 67498744 67498743 67498872 26731531 26731530 26731659 129 GTGGCATTTAGAAAGGGCATTTTCTGCTACAATCAATAGCTTCTGTAGCTGCTGTAATATTTGTTCTTACTTAGAGATATTACTCAGAATGTAGAAGCAATTGATTGTAGCCAGAAAATACACTTGCCA .::.:.x..:.x...x::....::xx..::............:.::.x:::x:.........x.xxx:.xxx...:.......x:xx......:....x........:..xx..x....::x:..x... 129M 81/129 62.8% 129/94230402 0.0% 0/129 0.0% 61932198 NA +3089 chr4 + 190214555 129462162 129462161 129462242 81 GTTTCGGGGAGGGGGAAGGGAGAGAGGGAGAGAGGACACAGGGAAATTTACAGCAAAATTTTTGCTGTTTATAGCTTTCTT chr4 - 94230402 67346028 67346027 67346108 26884295 26884294 26884375 81 GTGTGGGGGGGGGGGGAAGGAGAGAGAGAGAGCAAAAGCAAAAACACAGACTGTGAAACTTATTCTATTTACTGCTTTTCT ..x.x....:.....:.:........:.....x::.x:..:::.x.:xx..x.::...:..x.x..:....:x.....::. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 62116134 NA +3374 chr4 + 190214555 129479142 129479141 129479382 241 TTTATTGTCTTTAGAGTTTTCCTTATTTAAGGAAAGCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT---CTTTCTTTCT---------TTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT------TTCTTTTTCTTTCTT----TCTTTCTT--TTTTGAGACGGAGTCTCATTCTGTTGCCCAGGCTGGAGTGCAG chr4 - 94230402 92912805 92912804 92913063 1317340 1317339 1317598 259 TTTCTTCTCCCCATTGTTTTGCT------AAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCTGCTCTGGACTGAAG ...x..x..:::.xx.....x..------.:..x..x:...:::.xx..:..:..:.::x..:.xx.xx:.---...:......---------..::...::x...x:x:...:......:...:....xx..:x:..:.x:.::..x...:xx::x:.:::.:.....:..::.:..:.....:..------..x..:.x..x.:..----.......:--.::.x..x:x.x..x:.x:....:.x:.::xx.....x..x.. 23M6D42M3I10M9I94M6I15M4I8M2I43M 139/235 59.1% 259/94230402 0.0% 30/235 12.8% 36566337 NA +3731 chr4 + 190214555 129479199 129479198 129479316 118 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:..:.:::...:.....:..x:...:.x.x::::x:...xx....xxx:.:..x.:.:.:...............x.xx..::........ 18M6I100M 75/118 63.6% 124/94230402 0.0% 6/118 5.1% 86397298 NA +3740 chr4 + 190214555 129479203 129479202 129479320 118 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:..:.:::...:.....::.x:...:.x.x.:::x:..:xx....xxx:....x.:...:...............x.xx:.::........ 18M6I100M 75/118 63.6% 124/94230402 0.0% 6/118 5.1% 86397302 NA +3168 chr4 + 190214555 129479215 129479214 129479348 134 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTCT-----------------CTCTCTCTCTCTCTCTCTTTCTTTC-------TTTCTTTTTCTTTCTTTCTTTCTTTTTTGAGAC chr4 - 94230402 91731746 91731745 91731903 2498500 2498499 2498657 158 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATAC ..::.:x.........x::..x.....:...::........:..::...:xxxxx.:......x..::.:...:..-----------------...:.:x....::x.x...x..x:.-------:.:.::x..x..:.:....::x.:.:..:.x.. 76M17I25M7I33M 83/134 61.9% 158/94230402 0.0% 24/134 17.9% 37747469 NA +3024 chr4 + 190214555 129479275 129479274 129479334 60 TCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCT chr4 - 94230402 18988817 18988816 18988876 75241527 75241526 75241586 60 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCT ...:..x.x.:.:x..:.....xx::..x.:.:..........:............x... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 110490458 79724097 +3376 chr4 + 190214555 129503247 129503246 129503310 64 ACAAAAAT-TGTATGTGTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...x....-...x..:.....:::::......:......:.xx:.......::............ 8M1I56M 49/64 76.6% 65/94230402 0.0% 1/64 1.6% 114538428 75676127 +3731 chr4 + 190214555 129503247 129503246 129503316 70 ACAAAAATTGTATGTGTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACATATATA chr4 - 94230402 26165527 26165526 26165595 68064808 68064807 68064876 69 ACAAAAATTGTTCGTGTGTGTTTGTGTGTATCTGTATATACATAAATATACA-ATAAGGACACATATACA ...........x:........x.........x.:......:...x.:.:...-.:.x:x.........:. 52M1D17M 55/69 79.7% 69/94230402 0.0% 1/69 1.4% 103337720 86876835 +3308 chr4 + 190214555 129503249 129503248 129503335 87 AAAAATTGTATGTGTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACATATATATACACATATGAATACTACT chr4 - 94230402 24136190 24136189 24136276 70094127 70094126 70094213 87 AGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACACCCTTGACAGCTACT .:..xx..:..:.:.:.x.:..x:xx.:.x......:.......:...x...x...x.....:....x.....x:x...xx:..... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 105367059 84847496 +3064 chr4 + 190214555 129503251 129503250 129503294 44 AAATTGTATGTGTGTGTGTGTGTGTATATATATATATATACACA chr4 - 94230402 89821278 89821277 89821321 4409082 4409081 4409125 44 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ...x...:.....x.x.......................::... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 39681973 NA +3036 chr4 + 190214555 129503255 129503254 129503318 64 TGTATGTGTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACATATATATA chr4 - 94230402 54293165 54293164 54293228 39937175 39937174 39937238 64 TGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA .....:.:...:.....:..xxx:...:..x.xxx::......x...::............... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 75210090 NA +3423 chr4 + 190214555 129503271 129503270 129503360 90 TGTGTATATATATATATATACACACACACACACACACACATATATATACACATATGAATACTA---------------CTCAGCCATAAAAAATAATGAAATCAT chr4 - 94230402 66904840 66904839 66904944 27325459 27325458 27325563 105 TGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAAGAGAACAT ...x.x:......:..::..........:..............x..x::x..x:..x....x.---------------......:x....x:.x..x..:.x... 63M15I27M 66/90 73.3% 105/94230402 0.0% 15/90 16.7% 62598431 NA +3023 chr4 + 190214555 129504344 129504343 129504396 53 TGCGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.:..:.:..:.:::.:.:.:...xx........::............. 53M 38/53 71.7% 53/94230402 0.0% 0/53 0.0% 114539512 75675043 +3483 chr4 + 190214555 129520394 129520393 129520515 122 AAGCAGTA----GGAGAAGGAGAAGGAAAACAAGAAGAAAGAGACGAAGAAGAAAAAG------AAGGAGGAGATGAAGAAGAGGAAGAAGAAGGAGGAGAAGGAGGAAGAAGAGAAGGAGGAGGGAGGGGG chr4 - 94230402 91538026 91538025 91538155 2692248 2692247 2692377 130 AAGCAGAATCCTGGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAA--AGCAATTAATGGAGGAAGAGGAAGGAGG ......x.----.....:x:.........xx.x.:.......:..:.....:....x.------...x..:.:..:x....::::.x.::..xx:.xx....--..x..xx.:x.:....:....:...:.. 8M4I46M6I38M2D28M 82/120 68.3% 130/94230402 0.0% 12/120 10.0% 37982368 NA +3031 chr4 + 190214555 129520558 129520557 129520605 48 AAGAAGGAGGAAGAGGGGAAAGGAGGGGGGAAGAAAAGAAGACAAAGA chr4 - 94230402 77186079 77186078 77186126 17044277 17044276 17044324 48 AAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGA .....:..x.::.:....:::..............:.:....x..... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 52334479 NA +3299 chr4 + 190214555 129520915 129520914 129520957 43 CTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982314 18982313 18982356 75248047 75248046 75248089 43 ctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ...................x.x...............::..:. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 110538601 79675954 +3319 chr4 + 190214555 129520915 129520914 129520956 42 CTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982312 18982311 18982353 75248050 75248049 75248091 42 ctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..x..................x.................::. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 110538603 79675952 +3179 chr4 + 190214555 129520915 129520914 129520953 39 CTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629061 81629060 81629099 12601304 12601303 12601342 39 CTTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..x..........:.......x................. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 47891854 NA +3721 chr4 + 190214555 129520915 129520914 129520959 45 CTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982310 18982309 18982354 75248049 75248048 75248093 45 ctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..x.x....................................:... 45M 42/45 93.3% 45/94230402 0.0% 0/45 0.0% 110538605 79675950 +3316 chr4 + 190214555 129520920 129520919 129520955 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 47891856 NA +3002 chr4 + 190214555 129520922 129520921 129520956 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 47891858 NA +3222 chr4 + 190214555 129520922 129520921 129520961 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x..................:::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 110538607 79675948 +3084 chr4 + 190214555 129577103 129577102 129577156 54 TTGTAATATCTCCTGTTTCATTTCTTATTGATTGGATTTTTCTCTCTTTTTTAT chr4 - 94230402 65610754 65610753 65610807 28619596 28619595 28619649 54 TTGTACTATTTCCATTTTAATTTATTATTGCATGGATTTCTCTCTCATTTTTAT .....x...:...xx...x....x......xx.......:......x....... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 63966349 NA +3876 chr4 + 190214555 129649716 129649715 129649787 72 CTGCAGCCTCCACCTCCCAGGTTCCAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:xx.x..:.::.....x....x...x.xx.x.........:.............:....x.... 72M 55/72 76.4% 72/94230402 0.0% 0/72 0.0% 111452590 78761965 +3416 chr4 + 190214555 129650366 129650365 129650500 135 TAACAATCCAGTGAGTTGGGCAC-TGTTATTGTTCC-ATTTCACAGATGAGGAAACAGACACTTAAGAGATTTTATGTTATTTTCCCAAGATCACAGAAGTAGATCTAAATAGTGAAACAAAGATTAGAACTCAAAT chr4 - 94230402 80987835 80987834 80987967 13242436 13242435 13242568 133 TAACCCCCCTGCGAGGTAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAG--GTGAGTC--AGTGGCAGAGCTGGGAACAGACCTCAAGT ....xx:..x.:...x.:..:.x-.:x..x.:.:..-....:.......:......x..x:.x.x.....xx:..:..x.:..x......:......--..:::..--.:.:.:::.:.x::..x:...x.....:. 23M1I12M1I60M2D7M2D29M 86/131 65.6% 133/94230402 0.0% 6/131 4.6% 48662531 NA +3800 chr4 + 190214555 129650833 129650832 129650898 66 CTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGATGTGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:.::..........x...x..x.x........::...........:.:...--.:......... 53M2D11M 52/64 81.2% 64/94230402 0.0% 2/64 3.1% 111453694 78760861 +3366 chr4 + 190214555 129673627 129673626 129673707 81 TATATTCTGAAGTGTATTTGTGTGTATGTATATACATACACACACATATATATACACACATATATACATATATATGGATAA chr4 - 94230402 72800635 72800634 72800713 21429690 21429689 21429768 79 TATACTATGAAGTTGACTTGTTTACATATATATATATACACACACATATATAAAC-CAAA-AGAAACGTTTATATGATTAA ....:.x......xx.:....x.::..:......:.................x..-..x.-.x.x..:.x......:x... 55M1D4M1D20M 61/79 77.2% 79/94230402 0.0% 2/79 2.5% 56872992 NA +3027 chr4 + 190214555 129673639 129673638 129673679 41 TGTATTTGTGTGTATGTATATACATACACACACATATATAT chr4 - 94230402 56650843 56650842 56650883 37579520 37579519 37579560 41 TATATGCGTGTGCATTTATATACATACACACACATATATAT .:...x:.....:..x......................... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 73022796 NA +3018 chr4 + 190214555 129687861 129687860 129687913 53 ATATATATATATATATATATATATATATATATATATATATATATATAATATCA chr4 - 94230402 25493135 25493134 25493187 68737216 68737215 68737268 53 ATATTTATTTACCCATACATACATATATGTACATATACAGGTATATAATATCA ....x...x..:x:...:...:......:..:.....:.x:............ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 104194726 86019829 +3445 chr4 + 190214555 129710646 129710645 129710743 98 AAACATTTTTTGATTATATAATCACTATATATATACACACACACACACACACACACACACACACACACAAAAACATACATGCACACACAGTAGAAAAC chr4 - 94230402 56248410 56248409 56248502 37981901 37981900 37981993 93 AAACACTTTTAGATTGT-----CACTGTTTGAAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGATAGAATAC .....:....x....:.-----....:.x.:x.x:..x.x...x...............:.....x....x....x.x.:x..xxx.x::.....x.. 17M5D76M 67/93 72.0% 93/94230402 0.0% 5/93 5.4% 73462236 NA +3141 chr4 + 190214555 129727644 129727643 129727730 87 CTGCTGAATACACATGCATACACACATACACACACATACATATATGTGTATATA-----TGAATACATACACACATATTCATATATGTTATT chr4 - 94230402 61485366 61485365 61485457 32744946 32744945 32745037 92 CTACAGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACATTGTT ..:.x.....:....:...........:.....x::.:::...:.:.....x..-----..x.x.::..:.x.:.x..xx:.:..::..:.. 54M5I33M 58/87 66.7% 92/94230402 0.0% 5/87 5.7% 68242278 NA +3061 chr4 + 190214555 129743916 129743915 129743973 58 CTCTGTGGTAACTGAGTTTTACCTGAACATGATAAAAATTATCATTTTCTGTATGAAA chr4 - 94230402 66799820 66799819 66799877 27430526 27430525 27430583 58 CTCTGCGACAAATATGTTCTCACAGTACATGATAAAAATTGTCATTTTTTGTATGTAA .....:.::..x.:x...:.xx.x.x..............:.......:......x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 62944096 NA +3140 chr4 + 190214555 129772234 129772233 129772306 73 CCCCATAATTCCTCCACCTTCACGCCACATACTCCTTTTTTTTTTATTGGTCTCTCCCCCTCCTCCCTTCCCA chr4 - 94230402 92063998 92063997 92064066 2166337 2166336 2166405 69 CCACAGAACTCCTGCCTC----CGTCACGTCCTCTTTTTTTTTCTCTTGGCCACCCCCCCTCCACCCCCCCCA ..x..x..:....x.x:.----..:...:.x...:........:.x....:.x.:........x...::.... 18M4D51M 51/69 73.9% 69/94230402 0.0% 4/69 5.8% 37708236 NA +3457 chr4 + 190214555 129783610 129783609 129783684 75 TAATAAACCTGC-----GTATGAATATACAGTCATGGATTACTGTGTAATGAGAAATAGAAAAGAAATACCAAGAAGACT chr4 - 94230402 54506876 54506875 54506955 39723448 39723447 39723527 80 TAAAAAACCTGTTTTTTATATATATATATGTTTGTGAATTACTATATAATGAAAAATAGAGAAGCCATAACAAGAATACT ...x.......:-----:...:x.....::x.::..:......:.:......:.......:...xx...x......x... 12M5I63M 56/75 74.7% 80/94230402 0.0% 5/75 6.7% 75276734 NA +3152 chr4 + 190214555 129802939 129802938 129802987 49 ATTTCTTTCTGTTAATAATATTTTTTCTCTCTCTCTCTCTTTATTTTTT chr4 - 94230402 27919486 27919485 27919534 66310869 66310868 66310917 49 ATTTCTGAATTTTAAAAATATTTCTTCTCTCTCTCTCTCTTTTTTTTTT ......xxx.x....x.......:..................x...... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 101883453 88331102 +3080 chr4 + 190214555 129860638 129860637 129860676 39 TTTAGTTTTTTGTTTTGTTTTGGTTTGGTTTTTTTAAGT chr4 - 94230402 49277409 49277408 49277447 44952956 44952955 44952994 39 TTTGGTTTTTTGTTTTGTTTTGGTTTGGTTTTTGTATGT ...:.............................x..x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 80583229 NA +4064 chr4 + 190214555 129866605 129866604 129866702 98 CTGCAACCTCCGCCTTCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATCCACCACCATGCCTGATAATTTTTTG chr4 - 94230402 18197126 18197125 18197221 76033182 76033181 76033277 96 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTATCATCCTTTCATG ..:..:..:xx:x....:...........x...x.xx.x........::.............:....--.:.x......::..:x.x..xx...:x.. 67M2D29M 69/96 71.9% 96/94230402 0.0% 2/96 2.1% 111669479 78545076 +3217 chr4 + 190214555 129877824 129877823 129877919 96 AAGATTTCTGTTTATT-TATTTTTTGCTTTAATCTCAGTGCCTAGAGCAGTGTCTTTTTTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTGTTATC chr4 - 94230402 20711520 20711519 20711611 73518792 73518791 73518883 92 AAAATTTCTATTGCTTGTATGTTTTACTT--GTATTAGTTCT---AGCAGAGTTTTTTTGTTTGTTTTGTTTTTCTGTTGTTTTTTTTTAAGTTGTC ..:......:..xx..-...x....:...--:.x.:...x.:---.....x..:.....x........xx....x.x.......x....:x...:.. 16M1I12M2D11M3D52M 69/91 75.8% 92/94230402 0.0% 6/91 6.6% 109166304 81048251 +3199 chr4 + 190214555 129906769 129906768 129906831 63 TGCATGTGTGTGTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATACAATTATAT chr4 - 94230402 32959562 32959561 32959624 61270779 61270778 61270841 63 TGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATAT ....xx.....:::.:::::..x....x.....::...:..:....:..........x..... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 96947207 93267348 +3007 chr4 + 190214555 129938567 129938566 129938616 50 CTTTTTTCTTTTTCTTTTTTTTCTTCTCCTTCTCCTTCTCCTCCTCCCCT chr4 - 94230402 20596772 20596771 20596821 73633582 73633581 73633631 50 CTTTTTTTTTTTTTTTTTTTCCCTTCCTTTTCCCCCTCCCCCCCCCCACT .......:.....:......::....:::...:..:..:..:..:..x.. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 109341795 80872760 +3138 chr4 + 190214555 129938567 129938566 129938635 69 CTTTTTTCTTTTTCTTTTTTTTCTTCTCCTTCTCCTTCTCCTCCTCCCCTTTTTCTTCCACCTGTTCCT chr4 - 94230402 54635349 54635348 54635417 39594986 39594985 39595054 69 CTTTTTTCTTTTTCTTTTTTTTTCTCACCCCCTCCCCTCTCCCCTTGAATTTCTTTTCTCCTTTTGCCT ......................::..x..::....:::::.:...:xxx...:.:...:x.:.x.x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 75303218 NA +3029 chr4 + 190214555 129940227 129940226 129940273 47 TCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCACATCTATTATT chr4 - 94230402 46959207 46959206 46959253 47271150 47271149 47271196 47 TCCCCCTTTTTTTTCTTTCTTTTCTTTTTTTAATCACAAGTATTACT ..:.::........:...:....:..............xx.....:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 82981020 NA +3071 chr4 + 190214555 129940235 129940234 129940280 46 TTTTTTTTTTTTTTTTTTTTTTTAATCACATCTATTATTATTTTGG chr4 - 94230402 24294628 24294627 24294673 69935730 69935729 69935775 46 TTTTTACTTTTTTTTTTTTTTTGAATCATATCTACCATCATTCTGG .....x:...............x.....:.....::..:...:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 105645607 84568948 +3365 chr4 + 190214555 130011077 130011076 130011186 110 TTTCTTATATATATATATATTTATATATATATTTATATATATATTTTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATAT chr4 - 94230402 37291710 37291709 37291819 56938584 56938583 56938693 110 TTTTATATGCATATACATCTGCATGTACAGAATAATGAATACAGTATCTGTTATATATTTGAATACATATAAAAGCATATATTCATTTATATTTTAATATATCTATGTGT ...:x...::.....:..x.x:..:..:.x.x.x..:x...:.x.x.:xxx.........:x...:....xx.x::....x.x:..x.......xx......:...:.:. 110M 71/110 64.5% 110/94230402 0.0% 0/110 0.0% 92719367 NA +3205 chr4 + 190214555 130011104 130011103 130011177 74 TATATTTATATATATATTTTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATA chr4 - 94230402 73418583 73418582 73418656 20811747 20811746 20811820 74 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTA .:..:x....:......x..x:.:.........x.:.:......x...x.x.....xx...:.x...x.:.:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 56592521 NA +3328 chr4 + 190214555 130011224 130011223 130011296 73 TATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATAT chr4 - 94230402 73418583 73418582 73418655 20811748 20811747 20811820 73 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGT .:..:....x:.........x:.:.........x.:.:......x...x.x.....xx...:...x.x.:.:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 56592641 NA +3000 chr4 + 190214555 130011310 130011309 130011403 94 TATATATATATTTATATATATATATTTATATATATTTTATATATATTTATATATTTATATATATATTTATATATATTTATATATATTTATATAT chr4 - 94230402 87985348 87985347 87985441 6244962 6244961 6245055 94 TGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT .:.:.......x.x....:.:.:x:...:.:.x:X..:x.xx::.xx..x:x.:x.:...........:.......x....::.:.:..:..:. 94M 58/93 62.4% 94/94230402 0.0% 0/94 0.0% 42025962 NA +3328 chr4 + 190214555 130011399 130011398 130011471 73 TATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATTTATATATAT chr4 - 94230402 73418583 73418582 73418655 20811748 20811747 20811820 73 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGT .:..:....x:.........x:.:.........x.:.:......x...x.x.....xx...:...x.x.:.:. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 56592816 NA +3337 chr4 + 190214555 130011472 130011471 130011623 152 TTTTATATATATTTATATATTTATATATATTTATATATAAATATATATAAATATATATATATATATATAT----TTTTTTTTTTTTTTGAGAAGGAGTCTCACTCTTTTGCCCAGGCTGGTGTG-CAGTGGCGTGATCT-TGGCTCACTGCAAGCTTG chr4 - 94230402 8681897 8681896 8682043 85548360 85548359 85548506 147 TTTTACAACAACTAAAATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAG----------CTTTTGATTGTCCAGATGTGACAATGGTCTGGTTTGTCTCTTACTTTAAATTTG .....:.xxx.:.x.x..:xx...x:..:.:.:-...............x:...::.:.:.:...:....----:...............::..----------......x:::xx.x.:....-..:...:x..:.:.-.xx..:...x:..::... 33M1D36M4I20M10D20M1I14M1I18M 95/141 67.4% 147/94230402 0.0% 17/141 12.1% 121329575 68884980 +3528 chr4 + 190214555 130015803 130015802 130015904 102 TTGAGATAAGTTAGACATCTTTTTTTTTTTTTTTGGGGGGGGTTTAATTTTTTTTTTTTTTTTTTTTTTACTTTTTAATTTTCTTTTTTTTTTTTATTATAC chr4 - 94230402 2726018 2726017 2726108 91504295 91504294 91504385 91 TCGATTTAAGTTTGGCATTGACCTCTTT-----------GGATTTATTCTTCTTTTTTTTTTTTTTTTTACCATTTGGCTTCCTTATTTCTCTCTGTTAAAC .:..xx......x.:...:xx::.:...-----------..:....x.:..:...................:x...:::..:...x...:.:.:.:...x.. 28M11D63M 64/91 70.3% 91/94230402 0.0% 11/91 12.1% 127289785 62924770 +3200 chr4 + 190214555 130033962 130033961 130034031 70 CTCCTGGGTTCACGCCATTCTCTTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCACCCACCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.........x.:xx...x.xx.x.........:...........:......--.::x......:::. 54M2D14M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 111836823 78377732 +3432 chr4 + 190214555 130089282 130089281 130089331 50 AAAAAAAAAAAAAAAAAAAAAACCCTCGCTTTTTTCTTTCTTCCTTTCTT chr4 - 94230402 93378612 93378611 93378661 851742 851741 851791 50 AAAAAAAAAAAGAAAAAAAAAACTCCCTTTTTTCTCTTTCTTCCCCTTTT ...........:...........:.:.x:....:..........::.:.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 36710670 NA +3210 chr4 + 190214555 130089285 130089284 130089359 75 AAAAAAAAAAAAAAAAAAACCCTCGCTTTTTTCTTTCTTCCTTTCTTCC---TCCAGTTGCTCCAATTAGGCAACCTT chr4 - 94230402 53722814 53722813 53722887 40507516 40507515 40507589 74 AAAAAAAAAAAAAAAAAGACCCTTGATATCTTCTGTTTTTCCCTCTTCCCTTTCCATTTG----GGTTTGGCAATCCT .................:.....:.x.x.:....x.:..:.::......---....x...----::..x.....:.:. 49M3I8M4D14M 55/71 77.5% 74/94230402 0.0% 7/71 9.9% 76366471 NA +3125 chr4 + 190214555 130106149 130106148 130106202 54 AAAACAAACAAACAAACAAAAATATTGCCCAGATTCATGTCATGGAGCTTTTCT chr4 - 94230402 66233671 66233670 66233724 27996679 27996678 27996732 54 AAAACAAACAAACAAACAAAAACCTCACCTCAGTTCAAGTCAAAGTGCTTTTCT ......................:x.::..:x::....x....x:.x........ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 63872478 NA +3345 chr4 + 190214555 130116072 130116071 130116126 55 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGCACCTGTGTGTT chr4 - 94230402 19704284 19704283 19704338 74526065 74526064 74526119 55 ATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTT .......::.......x.....:...x::..............x.:..xx..... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 110411788 79802767 +3109 chr4 + 190214555 130137096 130137095 130137211 116 CATCAATCAATGAGTGGATAAAGCAACTGTGAGATATATATACGTGTGTGTATATATATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATACA chr4 - 94230402 40224610 40224609 40224718 54005685 54005684 54005793 109 CACAAACTAGCACATGTATAAAGCTA-------ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA ..:x..::.:::x:..x.......x.-------...:x.....:.:...:xx.x.x.:..:.xxx.x.:.x:.x.x.............:...:......x...:....:::.x.. 26M7D83M 70/109 64.2% 109/94230402 0.0% 7/109 6.4% 89912486 NA +3166 chr4 + 190214555 130137114 130137113 130137203 90 TAAAGCAACTGTGAGATATATATACGTGTGTGTATATATATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATA chr4 - 94230402 19704267 19704266 19704350 74526053 74526052 74526136 84 TGAAGCAATCTAAATACATATATACGT------ATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA .:......::xx:.x.:..........------......x...:.....x:...............x:.x.xx....x.x.xx..x..:. 27M6D57M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 110432847 79781708 +3046 chr4 + 190214555 130137148 130137147 130137241 94 TATATATGTATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATA----------CACATGT------ATATATATAAACATACACATGTATG chr4 - 94230402 48089497 48089496 48089603 46140800 46140799 46140906 107 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT---TACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCACACATATCTG .:..x:.x.:...:..:.:........:....x.x................---..:...x.----------x....x.------...:..x.:..:::......:.x.. 51M3D8M10I7M6I25M 68/91 74.7% 107/94230402 0.0% 19/91 20.9% 82047651 NA +3045 chr4 + 190214555 130137168 130137167 130137207 40 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.........:.............:.... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 40315886 NA +3101 chr4 + 190214555 130137174 130137173 130137274 101 TGTGTGTGTGTGTGTGTATATATATATATATACATACACATGTATATATATAAACATACACATGTATGATGGAATACTGCTCAGCCATAAAAAGGAATGAA chr4 - 94230402 48167038 48167037 48167131 46063272 46063271 46063365 94 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATGGTAAA-------TGTGCCAGGAAAAATACTGAA ...:.:.:.xxx::.:...:......x.:......:x......::x:...:.x.::............:.::.-------.xx....x:....:x.x.... 73M7D21M 62/94 66.0% 94/94230402 0.0% 7/94 7.4% 81970136 NA +3040 chr4 + 190214555 130201236 130201235 130201287 52 GTCTCAAAAAAAAGAAAGAAAGAAAAGAAAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 6438506 6438505 6438557 87791846 87791845 87791897 52 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA ....:.....:..:..:....:....:....:::..::...:....x:.... 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 123762730 66451825 +3468 chr4 + 190214555 130215006 130215005 130215121 116 ATAAGCATGTGCTGGAATCAGATCCTCTGGTTTTCATTCCTGGCTCTGCCACTTATTTGCCATGTAAACTTGAGCAAGTTATTTCAATTTTCTATCCTTCAATTCCTTCATTTGTA chr4 - 94230402 34850701 34850700 34850806 59379597 59379596 59379702 106 ACAGGCAGGTCAGAGAACCAGACAGTTTTGTT----------GATTTGCCACTGCTCTGCCATGTGACCTTGAGCAAGTCTTTTCACTTTTCTCTCACTCTGCTTCTCCTCCTGCA .:.:...x..xxx:...:....:xx.:.x...----------.x.:.......xx.:........:.x...........:x.....x......x..x:..x::.:..:.x::..:. 32M10D74M 71/106 67.0% 106/94230402 0.0% 10/106 9.4% 95364305 NA +3004 chr4 + 190214555 130247999 130247998 130248044 46 AGTTTTTTTCCTGTTGTTGTTATATTTGTCTACTTTATCTGTTAAT chr4 - 94230402 19318472 19318471 19318517 74911886 74911885 74911931 46 AGTTTTTTTGCTGTTGCTTTTATCTTTATTTATTTTATCTGTCAAT .........x......:.x....x...:.:..:.........:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 110929527 79285028 +3402 chr4 + 190214555 130280174 130280173 130280242 69 CTCCTAGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGTCTGCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:........::x...x.xx.x........:............:.:....x...-----...... 58M5D6M 51/64 79.7% 64/94230402 0.0% 5/64 7.8% 112083035 78131520 +3080 chr4 + 190214555 130294379 130294378 130294443 65 CTGCTTTGGCGTTTTTTTTGTTTGTTCGTTTTTGTTTTTTTTTCGTTTTTTTGTTTTGGCTTTGT chr4 - 94230402 72821328 72821327 72821392 21409011 21409010 21409075 65 CTGCCAAAGCGCTCCCATGGGTTTTGTGCTTTTGGTTTTGTTTTGTTTTTTTGTTTTGGCTTTGT ....:xx:...:.:::x.x.x..x.x:.:.....x....x...:..................... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 57473051 NA +3130 chr4 + 190214555 130294383 130294382 130294422 40 TTTGGCGTTTTTTTTGTTTGTTCGTTTTTGTTTTTTTTTC chr4 - 94230402 84354830 84354829 84354869 9875534 9875533 9875573 40 TTTGGGGTTTTTTTTGTTTGTTTGTTTTTGTTTTTTTCCC .....x................:..............::. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 45939553 NA +3344 chr4 + 190214555 130320029 130320028 130320111 83 CTGCAACCTCCGCCTTCTAGATTCAAGCGGTTCTCATGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGGCATGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG------CACCAC ..:..:..:xx:x.....:.:......:.x...x..x.x........::x:.........:......x.:.------...... 71M6D6M 56/77 72.7% 77/94230402 0.0% 6/77 7.8% 112122903 78091652 +3643 chr4 + 190214555 130358334 130358333 130358416 83 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGTTCCCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:.::..........x...x.xx.x........:..:.........:......x..x--......::.. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 112161208 78053347 +3139 chr4 + 190214555 130371018 130371017 130371057 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 111388703 78825852 +3102 chr4 + 190214555 130371020 130371019 130371055 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 48741956 NA +3353 chr4 + 190214555 130371020 130371019 130371059 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 111388705 78825850 +3316 chr4 + 190214555 130371022 130371021 130371057 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 48741958 NA +3567 chr4 + 190214555 130371022 130371021 130371061 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 111388707 78825848 +3102 chr4 + 190214555 130371024 130371023 130371059 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 48741960 NA +3353 chr4 + 190214555 130371024 130371023 130371063 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 111388709 78825846 +3139 chr4 + 190214555 130371026 130371025 130371065 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 111388711 78825844 +3100 chr4 + 190214555 130410255 130410254 130410318 64 CATTCTATCATTATATATATATATATATATATACACACACACATATATATATACATATATGTAT chr4 - 94230402 85546015 85546014 85546078 8684325 8684324 8684388 64 CATTTTGTCACAGTAGCTATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ....:.:...:x:..xx...x..........:.......x.:.:.:.:...x.xx......... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 44864240 NA +3013 chr4 + 190214555 130425183 130425182 130425246 64 CTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAACCTAA chr4 - 94230402 60416056 60416055 60416119 33814284 33814283 33814347 64 CCCTGTTCCAAAACAAAACAAACAAACAAAAAAAACCTAAAAAAAAAAAACCCCACAAACCTGA .:.:..::.....x....x...x...x.........xx............xxxx.x......:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 70009127 NA +3838 chr4 + 190214555 130427992 130427991 130428056 65 AAACCTTCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGCAGCTAGGGCTACACAGGCAC chr4 - 94230402 18197135 18197134 18197199 76033204 76033203 76033268 65 AAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...x................x...x.xx.x........::....:....:.::......:x.... 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 112230857 77983698 +3183 chr4 + 190214555 130445489 130445488 130445549 61 ACTTGCCTTTAGGTTTTTTGTTTGTTTGTTTTTGTTTTTTTTTCTTGTGATATCTTTGTCT chr4 - 94230402 19552180 19552179 19552240 74678163 74678162 74678223 61 ACTTAAGCTTGGGTTTTTTGTTTGTTTGTTTTTGTTTTAATTTTGTAAGTTGCCTTTGTTT ....:xx:..:...........................xx...:x.:x.x.::......:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 110893309 79321246 +3072 chr4 + 190214555 130447332 130447331 130447414 83 TCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTGTATATATATATATATATACCTATAATTTCAATTTATT chr4 - 94230402 19559262 19559261 19559344 74671059 74671058 74671141 83 TCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATT ....:x.:.:.xx:.:.:.:.xx..x.:.:.:.:.x.x.:.......:.................xxx......:x:.x.... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 110888070 79326485 +3421 chr4 + 190214555 130467554 130467553 130467615 62 TTAAAAACTTCCTCA-----AGAAAAACAAAAACAAAAAACAAAAACAAAACAGCAACCAAAAAAAG chr4 - 94230402 84065965 84065964 84066031 10164372 10164371 10164438 67 TTAAGGACTTTTTCATTTGAGGAAAAAAAAAAAAAAAAAGCAAAAACAAAACAACAATCGAGGAAAG ....::....::...-----:......x.....x.....:.............:...:.:.::.... 15M5I47M 49/62 79.0% 67/94230402 0.0% 5/62 8.1% 46401589 NA +5066 chr4 + 190214555 130484670 130484669 130484919 250 AATATATATATTATATATAATATATAATATATAATATATAATATATTATATATTATATATTATATATAAC-ATATTATATATTATATATT------------ATATATAACATATTATATATTATATATTATATATAACATATTATATATATAATATATATTATATATACGTATATATTATATATGTGTATATATATAATATATATTATATATACGTATATGTTATATATGTGTATATATATAATA-TAT----ATATATAAATGGAA chr4 - 94230402 30253322 30253321 30253563 63976840 63976839 63977081 242 aatgtctaaaatatatataatttaaaataaatatcaaataatttatGTTA--------GTCATATAAAACTGTAGTATATAGTCTATAGTTAAAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCA-----------------TGGCATATTACATATGTATGTCTTTATCTTATGT-TTATACATCTGCATTTGCTATAAAGGATAAAGTATGTAATAGTATCATCATTTAAAAATAGAA ...:.x..x.x..........x..x....x...x:.x.....x...xx..--------:.:.....x...-:..x......x.x....x.------------:.....x::.x.x...:..x...........x...x....:x......::.-----------------xx::......:......:.:.x.x...xx...:.-.....:..x:.:..x..:....x.x.xxx.x:...:.....-...----..x..x....:... 50M8D12M1I19M12I51M17D34M1D41M1I3M4I14M 160/224 71.4% 242/94230402 0.0% 44/224 19.6% 100231348 89983207 +3104 chr4 + 190214555 130501906 130501905 130501974 69 TATATATATGAATTTTATATATATATGAATTATATATATATATATATGAACCTATATCTGTTCATAGTA chr4 - 94230402 60376757 60376756 60376823 33853580 33853579 33853646 67 TATATGTATAAAATTTTTGTATGTATGAACTATTTATATATTTATATGAGAATACATACA--CATAGTA .....:...:..x...x.:...:......:...x.......x.......:xx..:..x::--....... 60M2D7M 51/67 76.1% 67/94230402 0.0% 2/67 3.0% 70125149 NA +3309 chr4 + 190214555 130539726 130539725 130539768 43 AAATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821279 89821278 89821321 4409082 4409081 4409124 43 AAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ............x.x.......................:..:. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 40718447 NA +3723 chr4 + 190214555 130548079 130548078 130548161 83 GAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAA chr4 - 94230402 36858293 36858292 36858375 57372028 57372027 57372110 83 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA ....:.x..xx..x.....x...:................x::x..xx.:..::....:..:..x.:.:.x:.:.:....... 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 93689786 NA +3784 chr4 + 190214555 130548096 130548095 130548244 149 AGAAAGAGAGAGAGAAAGAAAAAAGAAAG------AAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAA----AAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAAAGAAAGAAA chr4 - 94230402 21758900 21758899 21759061 72471342 72471341 72471503 162 AGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ......:...:...x...::..:...::.------..x..x..:x.x:x..:x..:x.x.:...x.x.x..x..x.:.....x.x.----.::...:......:.:.:....:.:...::x..:x......xxx....::...---.x....:.:...:x.. 29M6I51M4I53M3I16M 97/149 65.1% 162/94230402 0.0% 13/149 8.7% 108789196 81425359 +3048 chr4 + 190214555 130548108 130548107 130548161 54 AGAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAA chr4 - 94230402 59433067 59433066 59433120 34797283 34797282 34797336 54 AGACTGGGAAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGAA ...xx.::..:..:................:.x.....:....:..:..x.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 71115041 NA +4061 chr4 + 190214555 130548124 130548123 130548267 144 GAAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAG---AAAAGAAAGAAAGAAGAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAGAGAAAGAAAGAAA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ...::.x::..:.::..........:..:.x.......x:::..::x::.---x:...............x.:...x:..x--......x::..::..x..x.x..:.:x.::x.:.x:..:...:.:.:::..:x..x:...x..... 50M3I28M2I66M 89/144 61.8% 149/94230402 0.0% 5/144 3.5% 86494136 NA +3998 chr4 + 190214555 130548125 130548124 130548273 149 AAAGAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAG---AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA------AAAGAAAGGAAGAGAAAGA----AAGAAACAGATA chr4 - 94230402 72111981 72111980 72112142 22118261 22118260 22118422 162 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATA .:...::...::....x....:.:....:.x.x....x..x:.x.x.x.:x....x.::.......:x.---...x...:.:x.::.:.x:..:...:.:..:.xxx........::....------..:..x.x..::.....x.----..:...xx.... 69M3I49M6I19M4I12M 98/149 65.8% 162/94230402 0.0% 13/149 8.7% 58436144 NA +4033 chr4 + 190214555 130548132 130548131 130548267 136 AAGAAAGAAGAAAAGAA---AGAAAGAAGAAAAGAAAGAAAGAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGGAAGAGAAAGAAAGAAA chr4 - 94230402 44053977 44053976 44054116 50176287 50176286 50176426 140 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAA ...::.x.x.x:.....---..:.::..........:..:.x.......x:::..::x::.xxxx:.............::x..:..x...-.x......x::..::..x..x.x...::x:..x:..x....:...... 17M3I71M1I48M 88/136 64.7% 140/94230402 0.0% 4/136 2.9% 86494155 NA +3626 chr4 + 190214555 130548148 130548147 130548274 127 AAGAAAGAAGAAAAGAA---AGAAAGAAGAAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAAGAAAGGAAGAGAAAGAAAGAAACAGATAA chr4 - 94230402 44053977 44053976 44054107 50176296 50176295 50176426 131 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAA ...::.x.x.x:.....---..:.::..........:..:.x......:x::.:.:.x::.xxxx:.............::x..:..x...-.x......x......:.x:.x:x.:..:x:::.:..... 17M3I71M1I39M 81/127 63.8% 131/94230402 0.0% 4/127 3.1% 86494171 NA +4329 chr4 + 190214555 130549053 130549052 130549153 101 TGGCATTATCTCAGCTCACTACAACCTCCATCTCCTGGGTTCAAGTGATTCTCAGGCCTCAGCCTCCTAAGTAGCTGGGACTATAGGCACGTGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ......:..x.:------.....:..:xx.x..:.............x...x....x........:::..........:....:.--.::.::....::.. 12M6D67M2D14M 70/93 75.3% 93/94230402 0.0% 8/93 8.6% 112351939 77862616 +3534 chr4 + 190214555 130580297 130580296 130580358 62 TTTTAATAAAGCTTATCTTTGTTTTGTTTTGTTTTTTTTTTTTTTTAAAGAATGGGACTCTT chr4 - 94230402 52115313 52115312 52115374 42115029 42115028 42115090 62 TTTTAACACGGTTGGTTCTTGTTTTTTTTTGTTTTTTTTTTTTTCTAAAAAAGGAAGCTCTT ......:.x:.:.x:.::.......x..................:....:..x.:::..... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 78464984 NA +3510 chr4 + 190214555 130621270 130621269 130621367 98 TGGCATGATCTTGGCTCACTGCAAGCTCCACCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCGC-CCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ......x..x..------..:..:x.:xx.x..:.........x.:xx...x.xx.x........::..................x.:..-....::.. 12M6D72M1I8M 68/92 73.9% 93/94230402 0.0% 7/92 7.6% 112424156 77790399 +3381 chr4 + 190214555 130650631 130650630 130650739 109 AAGAAAAAGAAAAAAGAACAACAACGAAAACAAAAAACAAACAAAACAAAACAAAAAAACCTCATCAATAAACA------AGGCATTGAAGGAACA-TATGCCAAAAT---CATAAAAT chr4 - 94230402 25002861 25002860 25002979 69227424 69227423 69227542 119 AGAAATAATGAAGAAGCTTGACAATAGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCATTCATTCATTGAAGAAAAACTATACATAAACACACACAAAAT .::..x..x:..:...xx::....:::...x..x...........................:xxx..xx...:.------.xx........:..x.-...:.xx...:---..:..... 74M6I16M1I11M3I8M 78/109 71.6% 119/94230402 0.0% 10/109 9.2% 105647770 84566785 +3043 chr4 + 190214555 130650636 130650635 130650681 46 AAAGAAAAAAGAACAACAACGAAAACAAAAAACAAACAAAACAAAA chr4 - 94230402 20314344 20314343 20314389 73916014 73916013 73916059 46 AGAGAACAAACAACAACAACAATAACAAAAAGCATACAAAACAAAA .:....x...x.........:.x........:..x........... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 110336292 79878263 +3094 chr4 + 190214555 130650650 130650649 130650709 60 AACAACGAAAACAAAAAACAAACAAAACAAAACAAAAAAACCTCATCAATAAACAAGGCA chr4 - 94230402 83846368 83846367 83846425 10383978 10383977 10384035 58 AACAGCAAAAA--ACAAACAAACAAAACAAAACAAAAAAGACTTAATATTAAGCAGAGCA ....:.:....--.x........................:x..:.x:.x...:..::... 11M2D47M 46/58 79.3% 58/94230402 0.0% 2/58 3.4% 46804282 NA +3328 chr4 + 190214555 130677411 130677410 130677464 54 TTATTCACACACACACACACACACACATATATATATATGTATGTGTGTATATGT chr4 - 94230402 87372740 87372739 87372793 6857610 6857609 6857663 54 TTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT .....:x..x...........x.....:.:..x....:......::......:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 43304671 NA +3373 chr4 + 190214555 130679883 130679882 130680004 122 GATCCAGGACGCCCTATTTCTTGTCATTTTGGGATGGATACAGAGGAAATGTAA--------TTTTGGATGACAGGAAAGAAAAGGTTCTAGTAGATCGTACTTAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 13165734 13165733 13165841 81064562 81064561 81064669 108 GATCTAGAGTACATTGTTCCTTG------------GATCCCAGAGAGTATGTAACACAAGCATTTTGGAT----------AGAAAGTTCTATTAGATCATGATTTAAAAAAAAAGAAAGAAAGAAAAAAA ....:..::::.x:.:..:....------------.:x:x.....::x......--------........----------.:..:......x......:.:x..x.........:...:...:....... 23M12D19M8I8M10D50M 74/100 74.0% 108/94230402 0.0% 30/100 30.0% 117514149 72700406 +3026 chr4 + 190214555 130679961 130679960 130680020 60 TTCTAGTAGATCGTACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATCATAT chr4 - 94230402 31741121 31741120 31741180 62489223 62489222 62489282 60 TTTTAAGAGATACTGCTTAAGAGAAGGAAAAAAAAAAAAAAAAAAAGGAGCAGATCATAT ..:..:x....xx.:.....:.:..::...................::.:xxx....... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 98938840 91275715 +3100 chr4 + 190214555 130689982 130689981 130690138 157 GGTCTTTGGCTCACTTTTT-------AAGAGTTGCTCATTTTTTATCTTTGACTTTTAAGAGTTATAT-ATATATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATACACATATATATATATATAC chr4 - 94230402 4417272 4417271 4417436 89812967 89812966 89813131 165 GATGTCTGGAAAACTTTTTGACGAAAAATACTGATTCATTTTTCTTACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC .:.x.:...xxx.......-------..x.x.x::........:x.x:x..x..x..x.x.:xx.:x.-.x..x..x.:.......:.:.:.:.:.:.x:x.:....:...:x:x:.x.::.:.::...xx.x::..x..x............x...x.....:. 19M7I42M1I96M 96/157 61.1% 165/94230402 0.0% 8/157 5.1% 126272710 63941845 +3035 chr4 + 190214555 130690088 130690087 130690154 67 TATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:......:......x.:.....::x.:..:.::x:.....:.....:.:..:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 82523050 NA +3396 chr4 + 190214555 130690107 130690106 130690238 132 ATATATATATATACACATATATATATATATACATATGTATATATATATATATACATATATATATATATATATATACACATATATATATATATA-CATATATATATATATATATATTGGATAGCCATCCTCCAT chr4 - 94230402 4417343 4417342 4417472 89812931 89812930 89813060 130 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTG---AGCAATGCTTCAT ..x..x.:.....:...:.:.:.:.:.x:x.....:.:..:x:x:.x.::.:.::...xx.x::..x..x............x...x.....:-..:.x.:.:xx.:.....x.:..---...x..x..:... 93M1I23M3D13M 82/129 63.6% 130/94230402 0.0% 4/129 3.1% 126272764 63941791 +3025 chr4 + 190214555 130692924 130692923 130692983 60 TCCATTTTGACCCATTTTCTAGCTAAAAGTTTTGTCTTTCTAGGAATTTCTAATTATTTT chr4 - 94230402 69831187 69831186 69831246 24399157 24399156 24399216 60 TTCATTTTAACCTAATTTCAAACTAAAAGCTCTGACTCTCTATGAGTTATTGACTGTTTT .:......:...:.x....x.:.......:.:..x..:....x..:..x:.:.:.:.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 60861737 NA +3036 chr4 + 190214555 130702524 130702523 130702563 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 40881242 NA +3040 chr4 + 190214555 130714338 130714337 130714411 74 TCTTCCTCTCTGCCCCCCTCTTTCTCTCTCTCTCTCTTTCCTCCTTCTCTTCCTCCTCTTTTTTTTTTCGTCTT chr4 - 94230402 7499881 7499880 7499954 86730449 86730448 86730522 74 TTTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTCGTCTT .:.:.:x..:.x:.:..:.:x:....::.:...::x...x...:.xx:..x......:......:......... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 123214457 67000098 +3200 chr4 + 190214555 130730344 130730343 130730394 51 CTTCACAAAAACAAAAACAAAAACAAAAAAACAAACGAAAAAAACTTACAA chr4 - 94230402 72165088 72165087 72165138 22065265 22065264 22065315 51 CTGCACGATGACCAAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAA ..x...:.x:..x.............:.:..x...x............... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 58565256 NA +3109 chr4 + 190214555 130733209 130733208 130733255 47 AAAATAAAATAAATAAATAAATAAAAGCAGTTGTAAAAAAACAACAA chr4 - 94230402 65215075 65215074 65215121 29015282 29015281 29015328 47 AAAGTAAAATAAATGAATAAATAAAATCATTGGTAAAAAAATAAAAA ...:..........:...........x..x.x.........:..x.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 65518134 NA +3037 chr4 + 190214555 130817333 130817332 130817388 56 TCAATTTCTTTCAATTCCACTCTGATTTTAGTTATTTTTTTTTCTTCTGTTGGCTT chr4 - 94230402 61884659 61884658 61884714 32345689 32345688 32345744 56 TTAATTTCTTTTAATTGTTCTTTGAGTGTTGTTTTTTTTTTTTTTTTTGTTAGCTT .:.........:....x:x..:...x.x.x...x.........:..:....:.... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 68932674 NA +3324 chr4 + 190214555 130818913 130818912 130819006 94 ACACATATTTACACACATATATATTCACGCATGTGCACACACATATATAAATTTATATATGTGTTTATGTTTGTATAATCAATCAG--AAGCTAAA chr4 - 94230402 52481237 52481236 52481326 41749077 41749076 41749166 90 ACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTA------TATAATCATTGGGTCAAACTAAA ...::x..x..x:.::.:..:...x:.::...::.....:..xx.......:......:........------........x.x:.--..:..... 67M6D13M2I8M 63/88 71.6% 90/94230402 0.0% 8/88 9.1% 78337676 NA +3151 chr4 + 190214555 130827012 130827011 130827089 78 GTCTTGGCTAACACAGTGAAACCTGGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC chr4 - 94230402 79738071 79738070 79738148 14492255 14492254 14492332 78 GTCACAGGTAATCCACAGAAATGTGATTTTGCTTAAAAATACAAAAAAAAAAAAAAAAACCACAAACAGAAAACATGC ...x::.x...:x..xx....:x..:.:.:xx:..........................xx.x...x.:....x.x.. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 51088941 NA +3220 chr4 + 190214555 130849868 130849867 130849942 75 AAAATACATTTTAAAACGTTTTTTTTTCCTTTCTCTAGTTTTAGCTTTGAAAGTTACTTTGAAACTTTTTGTTTT chr4 - 94230402 12470606 12470605 12470670 81759733 81759732 81759797 65 AAAGTGTATTTTAAAGTGTTTTTTTTTCCTCTCCTTAGTTTTAA----------TACTAAGAACTTTTTTTTTTT ...:.::........::.............:..::........:----------....xx...x:.....x.... 44M10D21M 51/65 78.5% 65/94230402 0.0% 10/65 15.4% 118379262 71835293 +3096 chr4 + 190214555 130854613 130854612 130854675 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTAGGTAATAGCAAGCTCAAGCTATAAAAAAT chr4 - 94230402 41345721 41345720 41345783 52884620 52884619 52884682 63 AAAGAAAGGAAAAAAGAAAAAGAAAAAAAAACTATGAAGTAGAAAGTTCTAGCTTTGACATAT ...:...::......:.....:.......:.:..x.x.:...x...:..x....x.:.x.x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 89508892 NA +3198 chr4 + 190214555 130879032 130879031 130879090 59 CTCCCGGGTTCAAGCAATTCTCCTGGCTTAGTCTCCCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.........::x...x.xx....:..:..::.:.........:.:....x.... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 112681893 77532662 +16329 chr4 + 190214555 130952981 130952980 130953501 521 GAGGCATCTCACTTGTACAGGTGT--TTTCAAG-GAAAGACAAATAGTCTAAAGTAAAATGACGAAGGGAGCTCACAGAGCTATACATTAGACAAGTCAAAAGCTTCTTGATTTATTGAAGGCTCCTGGCAAAATTATTTAATACAAATTATAAAG-TATTCTAGAAAGATTTTTTTACTCTAATTTATATAGGAACTGTGATGTAGTGATATATTAGTGATATATATAGTGTGGTTTTTTTTTCTCTTAAAATCAGCAGTGTATTAGTCTACAAATAGAGAGCCAATGGAAGTATTAACATAATTTATATAGGCTGCAAATGTTAAGTG---TTTTATTCAGTGTAGAAATAAATCTATCTCTTTGATTAAATCCATCAATTAAGTCGATGGCTGAAATTCATTAAAATAGATGTATAGCATGCTACTGAAGACAAGCAAATGGCTCATCTATCACTACTAAGCAAACGATTGTAAGAAAAAAATGATATGGAAAAGATAGCACTTTAGCTTTCAATTTGCATCAGA chr4 - 94230402 67066709 67066708 67067222 27163181 27163180 27163694 514 GAGGTGCTGAATTTATACAGGTATGGTGTCGAGTAAAAGACAAATCAGCTAACAGGGAATAAAACAGACATCTTATAGACAGATATATCAGCCAAGTCAGAAACTTCTTGGTTCAGTGAAAGCTCCTGGCAACACCATTTAACACAGATTTTAAAAACATTACAGAAAAATGTCCC-AGTGTACTTTATAGAGG--CTGCTGTTTAGTAATGTATTTG------ATCTTATTTGATTGATTT--CTGTTAAGATTAGGATCATACTGGATTGCAAAAGAAAAACTGAAATACATACTAAAATAATTTATACAGGCTGTA--TTTTGAGAGCAGTTTTACTCATTGTAGAAATAAATCTACTTCTCTGTCTGAAGCTATCAATTAAAATGGGAGCCATTATTCAGTAAAATAAATATATAGTGTGTTATTCATGACAGGAGAATGTATCATGTATAAGTGGTCAATAAATCATTTT-AGGGAAAAGTGATACTGAAAATGGTGCACTTAAGCTTTCAATTTCCATTAAA ....::::xx.:..:.......:.--.x..:..-:..........x:x....x:x::...:.x:x..:x.x..:.:...xxx...:..:..x.......:..:.......:..:.x....:...........x.::......:...:...x....:-:...x:.....:..x.:::-.x.x..x......x...--...:x:.x....:..:....x.------..x.x:.x..:..xx...--..x....:..:..x.x::..:.:.x:.:....x::.:.:.::.x:x.x:..:...x..........:......:.--.x..:..x.---.....:...x................::...:..x:.:..x.:.........:x:.:x:..::xx.....x.......:..:.....::..:..:.x.x....:.x:....xx....x...x.x.:x.x.::...:x...x.-..::....:.....:x.....x:xx......x............x...:.:. 24M2I7M1I122M1I19M1D17M2D22M6D18M2D75M2D9M3I142M1D52M 344/507 67.9% 514/94230402 0.0% 21/507 4.1% 63886272 NA +3231 chr4 + 190214555 130956546 130956545 130956608 63 AAGAGATATATGTGTGTGTATGTATCTATATATGTATACATACACTCCTATATATACTCACAC chr4 - 94230402 31211038 31211037 31211100 63019303 63019302 63019365 63 AAAAGATAGAGGTATGTGGGTGTATGTATATATGTATACGCATGTTCTCATATATTTTCTCAC ..:.....x.x..:....x:.....x.............::.:::..::......x:..x... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 99745508 90469047 +3248 chr4 + 190214555 130994712 130994711 130994788 77 TTACTCCAGTTGTTTCTCTGTCCTGAAATCTTTTAACCATTCTTTCACCTATGTTCCTAGTACTTGCAAAAAACTAG chr4 - 94230402 88627434 88627433 88627508 5602895 5602894 5602969 75 TTTCTCCCTTTGTGCTTCT--TCTGAAATTTATAACCTATTCTCTCACCCATGTTCCTGGTACTTGTACAGCCCTAG ..x....xx....x::...--:.......:.x.x.x.:.....:.....:........:.......:.x.:xx.... 19M2D56M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 42367278 NA +3111 chr4 + 190214555 131050421 131050420 131050486 66 GCCAGAGACAAACTTATAGATGCGGATAGAGGAGAAAAAAAGACAGAGAGAGAGAAGAAAAAGAAG chr4 - 94230402 35568992 35568991 35569057 58661346 58661345 58661411 66 GCAAGAGACAAAGCCATGGAAGAGGAAAGCACTGAACAGAAGAAAGAGAGGGAGAAGAAGAAGAGG ..x.........x::..:..x.x...x..x:xx...x.:....x......:........:....:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 95481429 NA +3344 chr4 + 190214555 131051272 131051271 131051355 84 CCATCCCCTCCCCTCCCCTCTCCTCCTCTCCTCCCCTTCCTTTTTCTTTCTTTCTTTCATTTTCAGGAAACAAGG--TCTCTGTTG chr4 - 94230402 68014329 68014328 68014414 26215989 26215988 26216074 86 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATTATAAAAAAGAGCTTATCTGTTG .:::.::...........x.::::::.:...:.:..::x....:.:.............:.x.:.x:...x.::.--.x....... 75M2I9M 55/84 65.5% 86/94230402 0.0% 2/84 2.4% 63036943 NA +3615 chr4 + 190214555 131055830 131055829 131055931 102 AGTTTGTGATAAGTATATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATATATTCTA chr4 - 94230402 35554949 35554948 35555050 58675353 58675352 58675454 102 AGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAGTTTTTCCA ...x.:x.x...:........x.........:.:....:x:.:.........::...:.x.x..:.:..x.x.:x..x::x..x.:...x.:.xx.x...:. 102M 67/102 65.7% 102/94230402 0.0% 0/102 0.0% 95500881 NA +3708 chr4 + 190214555 131055843 131055842 131055924 82 TATATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.x.:......::.:x.:..:...x..:....:...::x..:..xx...:.:.............x.....x..:x... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 122660054 67554501 +4174 chr4 + 190214555 131055844 131055843 131055926 83 ATATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.x...:......::..x.:..:...x..:....:...::x..:..xx...:...............x.....x..:x... 83M 61/83 73.5% 83/94230402 0.0% 0/83 0.0% 122660056 67554499 +4336 chr4 + 190214555 131055846 131055845 131055927 82 ATTTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATACACACACACACACACACACATATATATAT chr4 - 94230402 8395788 8395787 8395869 85834534 85834533 85834615 82 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ..x.....:......:...x.:..:...x..:....:...::x..:..xx...................x...:.x..:x.. 82M 62/82 75.6% 82/94230402 0.0% 0/82 0.0% 122660058 67554497 +3182 chr4 + 190214555 131055859 131055858 131055926 68 TGTATATATATATATATATATATATATATATATATATATA------CACACACACACACACACACATATATATA chr4 - 94230402 54293155 54293154 54293228 39937175 39937174 39937248 74 TGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..:.:..x...:.......:...:.:...:xxx:...:..------:......x...::............... 40M6I28M 51/68 75.0% 74/94230402 0.0% 6/68 8.8% 76762704 NA +3056 chr4 + 190214555 131055886 131055885 131055929 44 ATATATATATATACACACACACACACACACACATATATATATTC chr4 - 94230402 66904847 66904846 66904890 27325513 27325512 27325556 44 ATATATGTACGTACACACACATACACACACACATATTTAAGTTC ......:..::..........:..............x..x:... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 64151039 NA +3123 chr4 + 190214555 131056551 131056550 131056605 55 ATACACAGATATATAGATACATATATATGCATATATATATAAAGACACATGTATA chr4 - 94230402 52487169 52487168 52487223 41743180 41743179 41743234 55 ATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCA ..:....x.......:.....x..:....::......x..x..:.:......::. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 78569382 NA +3076 chr4 + 190214555 131089467 131089466 131089511 45 TTTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTATTTTATTTTTA chr4 - 94230402 65458212 65458211 65458256 28772147 28772146 28772191 45 TTTTGTTGTTGTTGCTGTTGTTTTAGTTTAGTCAATTTATTTTTA ..............:.......x.x....x..:.x.......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 65631255 NA +4328 chr4 + 190214555 131092022 131092021 131092216 195 AGATTATTTTTATTTAAAAATGTGTTTTCTTGCACCATATACTTA-ATAACTATTAAAAGACATTTGCATTGTCAATAGATGGCAGCATAGCTCTTTA--AGAGTTCATGGGGAACTACTTAACAGTTTAAGATCATAGCCATTAGCCATGCTAAAAATGGTAATCTTAATAAA-GCTTTCTCATTGAACTTTTCTTAA chr4 - 94230402 68915065 68915064 68915256 25315147 25315146 25315338 192 AAATTTTTTTTAATAGAGCATTGGCTTTCCTAAGCC-----CTCACATAACATTGAAAGTATATTTATATTGCCAATAGATGGCAGCATCGCTCTTCAGCAGAGTTC--TGTAAGCTATTTAATGATTAATGTTGATGTAAATTACTTCAGCAGAAAATTGTTGTCTCAGTAAATGTTGTTCTGCTACATTTTTTCCAA .:...x......x.x:.:x..xx.:....:.:x:..-----..:.-.....xx.x...:x.:....::....:................x......:.--.......--x.x:.:...:....:::..x.x.x.x..:xxx....x::xx..x:.....x..x:...:.:....-.:.x.:::::.:x.:....:::.. 36M5D4M1I52M2I7M2D65M1I24M 121/188 64.4% 192/94230402 0.0% 11/188 5.9% 62176957 NA +3031 chr4 + 190214555 131104324 131104323 131104394 71 TTTTATAGAATTTAGAATAGAAAAAGATCTGGAAATTCAGCTTTGTTTGTATTTTTTAAAATTAACTTTTT chr4 - 94230402 31486971 31486970 31487041 62743362 62743361 62743432 71 TTTCATATATTGCAGACTAGGAAAATGTATGGGGATTATGTTCTGCTTGTATAGTTGAAAATTAACTTCTT ...:...x.x.x:...x...:....x:.x...::...xx.:.:..:......xx..x...........:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 99617353 90597202 +3081 chr4 + 190214555 131105625 131105624 131105674 50 ATATGTATATATGTATATATTATATATATTATATTGATAAATATAAATAA chr4 - 94230402 424211 424210 424260 93806143 93806142 93806192 50 ACATATATACATGCATATATTATATATGTTATATAGCTAGAAATAAATGA .:..:....:...:.............:......x.x..:.x......:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 130681414 59533141 +3033 chr4 + 190214555 131158592 131158591 131158670 79 AAAACATGTATGTATGTATGTATGTATGT--------GTGTATATATATATACACACACATATATATATTATATATATACGTATATA chr4 - 94230402 64360120 64360119 64360206 29870197 29870196 29870283 87 AAAAAATGTACAAAAAAATTAATATGTGTTCATAGCAGTCCATATATATACACACACACATATATAAACTATTCATGTGTGAATATA ....x.....::x.x:x..xx..:.:...--------..x:.........:...............x.:...x:..:.::.x..... 29M8I50M 57/79 72.2% 87/94230402 0.0% 8/79 10.1% 66798472 NA +3441 chr4 + 190214555 131175861 131175860 131175922 62 TTACATATATACATAAATATATATATATACATAAATATATATATTTATTTTTGAGATGGATT chr4 - 94230402 38338171 38338170 38338232 55892171 55892170 55892232 62 TTATGTATGTACATAAATATGTATATAGACACAAATATACAAACACACTTTTAAAATAAATT ...::...:...........:......x...:.......:.x.:x:.:....:.:..::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 92837690 NA +3318 chr4 + 190214555 131191922 131191921 131192001 80 AACCACACAAGAGTATAATTATATAT-ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681903 8681902 8681983 85548420 85548419 85548500 81 AACAACTAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..xx..:x.x...x::..:.x.-.....x..........:...::.:.:.:...:.....xx.:............. 26M1I54M 58/80 72.5% 81/94230402 0.0% 1/80 1.2% 122510019 67704536 +3008 chr4 + 190214555 131191944 131191943 131191997 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 122510014 67704541 +3222 chr4 + 190214555 131191946 131191945 131191999 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 122510016 67704539 +3080 chr4 + 190214555 131191948 131191947 131192013 66 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTAAAGAAA chr4 - 94230402 42757855 42757854 42757920 51472483 51472482 51472548 66 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTTGCAAAGA ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x...:x.:.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 88434093 NA +3068 chr4 + 190214555 131191951 131191950 131192006 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 38456603 NA +3337 chr4 + 190214555 131191955 131191954 131192006 52 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .::....x.....:...:..:.:...............:.x.........:. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 38456607 NA +3063 chr4 + 190214555 131191957 131191956 131192006 50 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735397 1495006 1495005 1495055 50 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT .::....x.....:...:..:.:........x......:.x......... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 38456609 NA +3688 chr4 + 190214555 131200454 131200453 131200514 61 CTCCTGGGTTCAAGTGATTCTCCTGCCCCAGCCTCCCGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.............x...x.xx.x.:......::.:.........:......x.:.... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 113003315 77211240 +3097 chr4 + 190214555 131213828 131213827 131213889 62 TCCACCTCAAAAAAAAAAAAACAAAAAACAAAAAACAACATGATAAAAATGGATAACAGCTT chr4 - 94230402 42243585 42243584 42243645 51986758 51986757 51986818 61 TCAACCCCCAAGAAAAAAAAA-AAGCAACGAAAAACAACATGCTAAGAACTGACAGCAGTTT ..x...:.x..:.........-..:x...:............x...:..:x..:.:...:.. 21M1D40M 47/61 77.0% 61/94230402 0.0% 1/61 1.6% 88970243 NA +3696 chr4 + 190214555 131220245 131220244 131220316 72 TTGCAACTCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAAATATTCTT chr4 - 94230402 13027537 13027536 13027608 81202795 81202794 81202866 72 ttgcatcacttCCTTTGTTTTTTTTTTTTTTTTTCCTCTCTTCTGCTTCTCCTTTGTTTATTAAATGATTTT .....x.x.:.x....x.................::.:.:..:.....::.x....:..:x.....:x.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 118192708 72021847 +3012 chr4 + 190214555 131241879 131241878 131241922 44 GCAGTTTTTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTT chr4 - 94230402 75733740 75733739 75733783 18496620 18496619 18496663 44 GTGGGTTTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTT .::.x......................x....x....x...... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 55508139 NA +3398 chr4 + 190214555 131241886 131241885 131241932 47 TTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTAGATGGAGTC chr4 - 94230402 13501389 13501388 13501435 80728968 80728967 80729014 47 TTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTAATATATATTC ....................................x.x..:x.x.. 47M 42/47 89.4% 47/94230402 0.0% 0/47 0.0% 117740497 72474058 +3157 chr4 + 190214555 131241887 131241886 131241928 42 TTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTTTTAGATGG chr4 - 94230402 66904542 66904541 66904583 27325820 27325819 27325861 42 TTTTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTTGAGGAGG ........................x..........x..:x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 64337345 NA +3047 chr4 + 190214555 131257150 131257149 131257191 42 TCAAAAAAAAAAAAAAAAAAGCAAAACAAACAAAAAAACAAA chr4 - 94230402 65284347 65284346 65284388 28946015 28946014 28946056 42 TCCAAAAAAAAAAAAAAAAAGCCTAACAAACAAACAAACAAA ..x...................xx..........x....... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 65972803 NA +3648 chr4 + 190214555 131378753 131378752 131378847 95 GATGAACACACATATATACGCACACACATATATACATACACATATACATATACATACACACATACACATATATACACATGTATATAAACACATAT chr4 - 94230402 89016081 89016080 89016175 5214228 5214227 5214322 95 GATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGAT ....x:.......x.::.:.........::.x.:.::.....:..:..x..:.......::.x.::::.:.::.x...:x.::::.x....:x.. 95M 59/95 62.1% 95/94230402 0.0% 0/95 0.0% 42362672 NA +4166 chr4 + 190214555 131425878 131425877 131426076 199 AAAGAAAGAAGGAGAGTAAAAAGAAAGAAAGAACAAAAGAACGAAAGAAAGAAAGGAAGGAAGGAAAAAGAAAAAAGAGAAAGAAAGGAA-GGATGGAGGGAAGG---GAAGGGAAGGGAGAAGGAAGGAGAGAGAGAGAGAGAA----AGAAAGGAAGGAAGGAAGGATGGAAGGAAAGAAGGAAAAAAAAAAGGAAGGATGGAGG chr4 - 94230402 72111981 72111980 72112183 22118220 22118219 22118422 203 AGAGAAGAAGGGAGAATAAA-AAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATG---GGAAAGAATGTGAGTCCAGGAAGGGAATGGAAG .:....::.:.....:....-.:.:....:.x......x...:.x.x.x:.x...:x.:....:.:.:x..xx...x.:....x::.:..-...x:...::....---...:.:..:.:...:.x.xx:..::x:x....:::..----.x...::..x..x:.x..x...---........x.x:.:xxx.::::::.:.....:. 20M1D69M1I14M3I37M4I22M3D33M 120/195 61.5% 203/94230402 0.0% 12/195 6.2% 59313897 NA +3804 chr4 + 190214555 131425931 131425930 131426090 160 AGGAAGGAAGGAAAAAGAAAAAAGAGAAAGAAAGGAAGGATGGAGGGAAGGGAAGGGAAGGGAGAAGGAAGGAGAGAGAGAGAGAGAAAGAAAGGAAGGAAGGAAGGATGGAAGGAAAGAAGGAAAAAAAAAAGGAAGGATGGAGGGAAGGGAGAAGGAA chr4 - 94230402 44053989 44053988 44054135 50176268 50176267 50176414 147 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAA---GAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGA-----ATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGG-----ATAAAGGAAGAAAGGAGAGCAGTGAGACAGAA .:...x.:....:........:.::..:.x..---:.::....:.:.:x...xxxx....::....:....:x:.:.:x..-----.x.x....:.x:...:...x:...x..:::x:.:x..-----.x........:.x....:.x..x....x:... 32M3D46M5D37M5D32M 94/147 63.9% 147/94230402 0.0% 13/147 8.8% 87371942 NA +3221 chr4 + 190214555 131425957 131425956 131426052 96 AAAGAAAGGAAGGATGGAGGGAAGGGAAGGGAAGGGAGAAGGAAGGAGAGAGAGAGAGAGAAAGAAAGGAAGGAAGGAAGGATGGAAGGAAAGAAG chr4 - 94230402 79555897 79555896 79555984 14674419 14674418 14674506 88 AAATACAAGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGA-------AAAGAAAAAAAAAAAGTGCTTTAGAATGTAA-GAAAGAAG ...x.x.:...::..x.......x..::...x.......:...::....-------.:.....:...::...x:xxxx..:...x..-........ 49M7D31M1D8M 63/88 71.6% 88/94230402 0.0% 8/88 9.1% 51870060 NA +3481 chr4 + 190214555 131425962 131425961 131426131 170 AAGGAAGGATGGAGGGAAGGGAAGGGAAGGGAGAAGGAAGGAGAGAGAG-AGAGAGAAAGAAAGGAAGGAAGGAAGGATGGAAGGAAAGAAGGAAA----------AAAAAAAGGAAGGATG--------GAGGGAAGGGAG--AAGGAAGGAGAGAAAGAAAGAGAGAAGGAAA--------GAGAGAGAAAGAAGAG chr4 - 94230402 30232147 30232146 30232344 63998059 63998058 63998256 198 AAGGTAGAATGAGGTTAAAGGG-TAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAGTTCAAGGCAATCATAGGTAGTATGTTTACTGTGAATGAGATGAACTGAAGGATGTGAAAAAGAAATCAAAAAGAAAAGTTTCTCTGAAAGAGAAGATAAAG ....x..:...::.xx..:..:-x::.....x...:..x...:..::.x-.::.....:..x..x.........:....:x:.:..:::.......----------..xx.x...x..x...--------..:x..::x..:--:.:.:.x.x..:.......xx:.:...:...--------..:......::x.:.. 22M1D26M1I46M10I16M8I12M2I31M8I16M 111/169 65.7% 198/94230402 0.0% 30/169 17.8% 101193815 89020740 +3199 chr4 + 190214555 131426027 131426026 131426187 161 AGGAAGGAAGGATGGAAGGAAAGAAGGAAAAAAAAAAGGAAGGATGGAGGGAAGGGAGAAGGAAGGAGAGAAAGAAAGAGAGAAGGAAAGAGAGAGAAAGAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAAGAGAAAGAAGAGAGAGAAG chr4 - 94230402 75014837 75014836 75014997 19215406 19215405 19215566 161 AGAGACAGAGGATAGAAAAATATAAGGCAGAAAAAAGTCAAGAGAAGCCTTAAAGGATGGCAAAAGAAATAAAAAGAAGCTGGAGAATACAGAACTCAAGAAACAAAAGAATAAAGAATTGCTAGAATTAAAAAAAAAAAAAGGGGGGGGGGAGGGGGGGG ..::.x::.....:...::.x.x....x.:......:xx...::x:.xxxx..:...x::x:..:..:.x...:.:.::xx.:..:.x.x...:xxx.....:x:.:....x:...:.xx.xx...:xx.:.:.:..::....:.:::.::...:.:.::. 161M 86/161 53.4% 161/94230402 0.0% 0/161 0.0% 56411190 NA +3017 chr4 + 190214555 131426103 131426102 131426168 66 AGAGAGAAGGAAAGAGAGAGAAAGAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAA chr4 - 94230402 21445990 21445989 21446055 72784348 72784347 72784413 66 AAGGAGGAGGAGAACAGTAAAGAAAATAGTGAGAAGGAATGAGAAAAAGAGAAAGAGGCAATGTAA .::...:....:.:x::x.:.:.:..x..x.........x....:............:x..x.x.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 109980113 80234442 +3036 chr4 + 190214555 131426117 131426116 131426187 71 AGAGAGAAAGAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAAGAGAAAGAAGAGAGAGAAG chr4 - 94230402 65614388 65614387 65614458 28615945 28615944 28616015 71 AAAGGAAAAAGGGAGAGAGTAGAAAACACAGAATGACAAGTGAAGCAAAGGAGAAAAAGAAGAGAAAGAAG .:..::...:::.......x..:..:x.x....x..x..:x::..x.::::...:..........:..... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 65811729 NA +3038 chr4 + 190214555 131426126 131426125 131426208 83 GAAGAGAGAGAAGGAAGGAGAGAAAGAGAAAGAGAGAAGGAAAGAGAAAGAAGAGAGAGAAGGAAGGAAGAAAAGGAAGGAGA chr4 - 94230402 27835405 27835404 27835487 66394916 66394915 66394998 83 GGACACAGCAAAAGATTGAGAGAAAATGAGGAAGGGAGAAAAACTGAGATAGGAGGATGAAGGAAGGTAGAAATTGAAAGAGA .:.x.x..x:..:..xx........:x..:::..:..:::...xx..:.x.:...::x.........x.....xx...:.... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 103590721 86623834 +3522 chr4 + 190214555 131426212 131426211 131426319 108 AAGGACGGAAGGAAGGAAGG-----AAAGGAAGGAGAAGAAAGGAAGGAATGAAGGAGAAAATAAGGAAGGAAAGAAAAAAGGAAGAAATGAAGGAAGGAAAGAGAGAAAAAA chr4 - 94230402 32638684 32638683 32638796 61591607 61591606 61591719 113 AAAGATGAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAA ..:..:.:.::x:....::.-----.::.......:.:....x:....:..x.:x.::x...:x::x.......:.x.:.x..:.:xxx..:.:.....:....:........ 20M5I88M 68/108 63.0% 113/94230402 0.0% 5/108 4.6% 98787528 91427027 +3522 chr4 + 190214555 131426212 131426211 131426319 108 AAGGACGGAAGGAAGGAAGG-----AAAGGAAGGAGAAGAAAGGAAGGAATGAAGGAGAAAATAAGGAAGGAAAGAAAAAAGGAAGAAATGAAGGAAGGAAAGAGAGAAAAAA chr4 - 94230402 32636721 32636720 32636833 61593570 61593569 61593682 113 AAAGATGAAGATGAGGAGAGTTTTAAGGGGAAGGAAAGGAAACAAAGGGATCAGTGGATAAACTGACAAGGAAAAATAGATGGGAACTTTGGAAGAAGGGAAGAAAGAAAAAA ..:..:.:.::x:....::.-----.::.......:.:....x:....:..x.:x.::x...:x::x.......:.x.:.x..:.:xxx..:.:.....:....:........ 20M5I88M 68/108 63.0% 113/94230402 0.0% 5/108 4.6% 98789491 91425064 +3202 chr4 + 190214555 131493797 131493796 131493875 79 ATTTTTTTTTTTTTTACTATTTGAATTCCATGCACCTCGCTGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 - 94230402 75901135 75901134 75901213 18329190 18329189 18329268 79 ATTCTTTTCTTTTCTGTTTTTCTGGTGTCATGCCCCACCCCCCGCCCCTTTTTTTTGTTTTGTTTTATTTTAAGAAGGA ...:....:....:.::.x..:x::.x:.....x..x.x.:x.x.::.........x....x....x....:...x... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 55592662 NA +3066 chr4 + 190214555 131512559 131512558 131512614 56 TTAAATAATACATACACACACACACACACACACACACACACACACACACCCTCAAA chr4 - 94230402 28470358 28470357 28470413 65759990 65759989 65760045 56 TTAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAA ....:..:......:::.:.....x...:::.::........:...:..:.x.... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 103042201 87172354 +3274 chr4 + 190214555 131536163 131536162 131536254 92 CTGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAATCAATGTGTAATATAAAATGTTCTCACAA-----AGAAAACCAAAAGCCCATGTATATT chr4 - 94230402 58890727 58890726 58890823 35339580 35339579 35339676 97 CTGTGTTGAAAAAAAAAAAAAAAGACAGAAAAGAACATGAAATATATAGTATAATATACTTGTATAATAGTCAAGAAGCTAGTAGTCAATGAACACT ....x.::...............:.x.........x.xxx...:.:..:.....x..::.:x:.:..-----.::..:.:.:x..:.x...x.:.:. 67M5I25M 62/92 67.4% 97/94230402 0.0% 5/92 5.4% 72645436 NA +3143 chr4 + 190214555 131544698 131544697 131544742 45 TTAAAAAAAAAAACCCAAAACAAACAAACAAACAAAAAAAACAAA chr4 - 94230402 81661608 81661607 81661648 12568755 12568754 12568795 41 TTAAAAAAAAA----CAAAACAAACAAACAAACAAAAAAAACAGA ...........----............................:. 11M4D30M 40/41 97.6% 41/94230402 0.0% 4/41 9.8% 49883090 NA +3261 chr4 + 190214555 131590964 131590963 131591086 123 GTGTTCACATATATATA----TATATATTTCCAGCTAGAGTACAGTGTTCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 71862976 71862975 71863097 22367306 22367305 22367427 122 GTGTCAGCATGCATTTAACTTTTCATGTTCCCATTTATAAAATTGT-----TGTAAATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCT ....:x:...::..x..----.x:..:..:...x:..x.:x.:x..-----.:..x....x...x.:x.x..:x....x....:.:x.:x.x...:....:.x...:.x................:. 17M4I25M5D76M 79/118 66.9% 122/94230402 0.0% 9/118 7.6% 59727988 NA +3759 chr4 + 190214555 131590972 131590971 131591084 113 ATATATATATATATATTTCCAGCTAGAGTACAGTGTT---CATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681901 56681900 56682003 37548400 37548399 37548502 103 ATGTAAATTTATATAT-------------ACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ..:..x..x.......-------------...:....---..:.....xx.x.x:......x:.:....x:.:...:....:..x:.......x...x...x....x......... 16M13D8M3I76M 76/100 76.0% 103/94230402 0.0% 16/100 16.0% 74909071 NA +3433 chr4 + 190214555 131590991 131590990 131591071 81 CAGCTAGAGTACAGTGTTCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681905 8681904 8681983 85548420 85548419 85548498 79 CAACTAAAATGGA-TATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..:...:.:.:x.-.:.:...:.x.:-.....x..........:...::.:.:.:...:.....x:.:............. 13M1D12M1D54M 58/79 73.4% 79/94230402 0.0% 2/79 2.5% 122909086 67305469 +3494 chr4 + 190214555 131590996 131590995 131591087 92 AGAGTACAGTGTTCATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865432 4865431 4865518 89364885 89364884 89364971 87 AAAGAACAACGTTCTTGTAAA-----GTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT .:..x...::....x.:..x.-----:..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 21M5D66M 65/87 74.7% 87/94230402 0.0% 5/87 5.7% 126725564 63488991 +3207 chr4 + 190214555 131591000 131590999 131591080 81 TACAGTGTT-CATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200246 4200245 4200327 90030076 90030075 90030157 82 TACAATGCTACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ....:..:.-...x.x..:xx:..x.xx..x............:.:.:..............::...:xxx.......x... 9M1I72M 59/81 72.8% 82/94230402 0.0% 1/81 1.2% 127390754 62823801 +3008 chr4 + 190214555 131591012 131591011 131591065 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 122909082 67305473 +3326 chr4 + 190214555 131591012 131591011 131591094 83 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCT chr4 - 94230402 56681929 56681928 56682011 37548392 37548391 37548474 83 ACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTGGTCTGCT .:.....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x....x.........xx.:.x.. 83M 59/83 71.1% 83/94230402 0.0% 0/83 0.0% 74909083 NA +3222 chr4 + 190214555 131591014 131591013 131591067 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 122909084 67305471 +3014 chr4 + 190214555 131591016 131591015 131591074 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 88833161 NA +3029 chr4 + 190214555 131591016 131591015 131591090 75 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681929 56681928 56682003 37548400 37548399 37548474 75 ACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .:.....xx.x.x:......x:.:....x:.:...:....x.xxx.......x...x...x....x......... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 74909087 NA +3123 chr4 + 190214555 131591018 131591017 131591069 52 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681932 8681931 8681983 85548420 85548419 85548471 52 ATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..........:...::.:.:.:...:.....xx.:............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 122909086 67305469 +3282 chr4 + 190214555 131591021 131591020 131591076 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 38855673 NA +3496 chr4 + 190214555 131591023 131591022 131591078 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 38855675 NA +3044 chr4 + 190214555 131591025 131591024 131591089 65 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.xxx.:.........x..x....x..........:. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 126725571 63488984 +3282 chr4 + 190214555 131591025 131591024 131591080 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 38855677 NA +3017 chr4 + 190214555 131591026 131591025 131591085 60 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.x.xx:.........x..x....x..........:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 126725567 63488988 +3068 chr4 + 190214555 131591027 131591026 131591082 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 38855679 NA +3404 chr4 + 190214555 131596263 131596262 131596337 75 TCCTTATATCCTTCCTTTCTTCCTTTCCTCCCTCTCTCCCTTCCTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTC chr4 - 94230402 24861601 24861600 24861673 69368730 69368729 69368802 73 TCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTC--CTCTCTTTTCTCTTTTTCTTCATTCATCC ...:...:..x..:.........:.:.x:.x:....:.....:.--..:..:..:..::...:....x...x.:. 44M2D29M 52/73 71.2% 73/94230402 0.0% 2/73 2.7% 106734662 83479893 +3223 chr4 + 190214555 131596505 131596504 131596575 71 CCTTTATTCCTCCCTCCCTCCCTTCCTTCCTCCCTTTCTTTCTTCCTCCCTTCCTTTTTTCCTTCCTTCCC chr4 - 94230402 179499 179498 179569 94050834 94050833 94050904 71 CTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTC .:...x...:..:...:xx..:..x.x...x.::...x.:.:.........:.:.:......:..:.:.:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 131417006 58797549 +3127 chr4 + 190214555 131616363 131616362 131616541 179 TGTGTTTCTATTTTATTT-------CAGTTACA-TATATATTGCTAATTTTTATTCTTTTTTGCTCTTTATCAGACATTCAAAATTCTATTTCACTGATCTTAGCAAGTACTGATCTTAGCAAGTAAACATTATATACAGACACACACACACACACACACATATATATATGTATTTCTTTAAATTTC chr4 - 94230402 87372625 87372624 87372796 6857607 6857606 6857778 172 TGTGTTTCCCTTCTCTCTGTTTTAAAAGTTACACTGTGTATATTCAATCTGAATTCTGTGCCACGAGTTAGGAAACATGCTGAGTAAT-TTTCACAGA-CTAGATAAG-------------AGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTC ........:x..:.x.:.-------x.......-.:.:...xx::...:.xx.....x.x:::.xxx...xx.:....x.x:.:.xx.-......x..-..x:::...-------------.::x...x.....x.x..:...........x..........x....::.:.:.x:x.x..x..... 18M7I8M1I54M1D9M1D9M13D66M 109/164 66.5% 172/94230402 0.0% 23/164 14.0% 44243738 NA +3444 chr4 + 190214555 131697025 131697024 131697107 83 TTTGTTTGTTTGTTTGTTTTGTTTTGTTTTTTCAAATGGCTAATTTTTTTCTCTTTAATCATTTTACTGGATTCCTCAGATTC chr4 - 94230402 56809526 56809525 56809608 37420795 37420794 37420877 83 TTTGTTTGTTCATTTGTTTTTTTTTTTTCTTTTGAGAAGCCAGTTCGTTTCACTCTGAGCATTCAAGTGGGGTCATCTCATTC ..........::........x....x..:...::.:x:..:.:..:x....x..:.:.x....:x.x...:x..x..xx.... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 74887499 NA +3607 chr4 + 190214555 131702720 131702719 131702845 126 AGTGAGATTCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATA-TACAATT-----TCTGCCCT-TATTTATCTATATAATT-TTGTATAATTATTTTATGATTGCTTA chr4 - 94230402 47152891 47152890 47153024 47077379 47077378 47077512 134 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATATTACAATTAACAATGTGACTTATTCTCATCCATATAATTACTACAAACACAATTTATAACTACTTA ..x.:..:x.x..x:...................xx.:...x:x...::.x.x.x......:......-.......-----.x..x.:.-.x:.:...:........-:.::.x.xx:.x.....:.:.:.... 68M1I7M5I8M1I17M1I26M 89/126 70.6% 134/94230402 0.0% 8/126 6.3% 84549829 NA +3017 chr4 + 190214555 131702750 131702749 131702788 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 62265011 NA +3108 chr4 + 190214555 131810026 131810025 131810082 57 TAATAAGAAAAAAAAAAAAAAAAAAAAAAACCTCTCATAAAAGTTAACTCCTTACAA chr4 - 94230402 15238839 15238838 15238895 78991508 78991507 78991564 57 TGGTAGGAAAAAGAAGAAAAAAAAAAAAAAGGTCTCTTAAAAGTCTATTACTTAAAA .::..:......:..:..............xx....x.......:x.:.x....x.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 116571187 73643368 +3299 chr4 + 190214555 131824528 131824527 131824583 56 TTTCTTTAATTAAAAAACAAACAAACAAAAACACATAAACAAACAAACAAACAAAA chr4 - 94230402 14097430 14097429 14097485 80132918 80132917 80132973 56 TTTTTTTCCCTAAAAAACAAACAAAAAAAAACATCCAAACAAACACAGAAGCAAAA ...:...xx:...............x.......:x:.........x.x..:..... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 117727098 72487457 +5036 chr4 + 190214555 131841314 131841313 131841511 198 TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTCCTTTCTTTCTTTCTTTCTCCTTTTCTTTTTCTCTCTTTCTTTTTCTCTCTCTCTTTC----TCTATCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTGGCAGGGTTTCACTCTTGTCA chr4 - 94230402 26883454 26883453 26883649 67346754 67346753 67346949 196 TTTCTTTTTCTTTTTTGTAGCTCATTATACCAGCTCCCTCTCTTTGTCTTTTTCTGCCTGATATACTTATTTCCCTCTCCTTTCTTTACTGCTTGTTCCTTTCCTGACTCTGTGCTTCTTTCCCAGTTCCCCCTTTGCCATCTATCCTTCCCTCTGTTTCCCTCTAACATCTGTTTCATTTGCC------TCATTCCTGCCA .:.:.:.......:..x:xx:::x.:x.x.:xx..::..:.....x.:.:.....x:..xx:x.x:..x....::............x:.x...x:......:..xx:...x.x:......::.xx.::.:.:..:----......:...::...x....::...xx.x.:.x...:x....x.------...:..:..:.. 136M4I44M6D12M 119/192 62.0% 196/94230402 0.0% 10/192 5.2% 104957860 85256695 +3053 chr4 + 190214555 131849341 131849340 131849420 80 TCTTCATTTGACTCCCTGGTTTTATATTATTTGTATACTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCCTCTCTCT chr4 - 94230402 43081945 43081944 43082024 51148379 51148378 51148458 80 TTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:...x:.::x.::..xx...::..x.::x..x.:x......x.:...:...............x.:x..:.:...:... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 88767396 NA +3098 chr4 + 190214555 131852655 131852654 131852703 49 CATCAAACAAACAAACAAACAAAAACTAAAACTGGAAGAATACCCAAAA chr4 - 94230402 89551827 89551826 89551875 4678528 4678527 4678576 49 CATCAAACAAACAAACAAAGTAAAACTAAAAGTGAAACATTGCCTAAAA ...................xx..........x..:..x.x.:..:.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 42300828 NA +3055 chr4 + 190214555 131908545 131908544 131908607 63 ATATATATATACACACACATATATATATACACGTATATATATATATACACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x.....x...:.:...:.:::.x..::x.:....x.....::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 114387796 75826759 +12498 chr4 + 190214555 131932461 131932460 131932751 291 TATAATTGTTACTCAGCAAAAATAGA---AAGATGTTAGCTGACTGTGTCAA----AAGAAATATTTTAACACTGATTTCATTTTTACTAAATGAA-----------------TTTTTC-----TTTATGTTTTATGCATAAGCTTCCCTGCTTTCTATTTTTTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGATTGCTCAAAGTAATTAATCATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAACTGTGTTAGGAAAT chr4 - 94230402 66748702 66748701 66749015 27481388 27481387 27481701 314 TATAATTAATAGCTAATAAGAAAAGGGGCATAATTTTAACAAGATTTGCCTACTTGAAGAAATATTTCTATGCTGAGTTCACTCTTATTGAATTGAAAGCTATTTTTTTTCTTTTTTTCCCCCTTTTATGTTTTATTCATGAGATCCCCT------TTTGCTTTTCAGTTTAAATAAAGAACTGTGATTATCTGTAAAACTGATTGCTTAAAGTAATTAATCATTTTCCTTATGAAATTTCCTGGGTAACTTAAGGATCTTATAATTGAAGGGTTTTCTCTTGTGTAAATGGAGCATGCTGAGAGCCCAGACTGAAAAAT .......:x..x::.::..:..x..:---.x:..x...:.x::x.x..:.x.----...........:x.::....x....:.:...:.:...x:.-----------------......-----............x...:..x.:....------.x.x:...x::...............::............x...........:..................:...........x..x......x.....:...........:x..:............x..:.x.:.:...:......:x.::x::.:::.... 26M3I23M4I40M17I6M5I26M6D164M 215/285 75.4% 314/94230402 0.0% 35/285 12.3% 65183759 NA +3198 chr4 + 190214555 131951934 131951933 131951980 47 TTGTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGAGACGTTGTCT chr4 - 94230402 60784263 60784262 60784309 33446094 33446093 33446140 47 TTTTTTGTTTGTTTGTTTGTTTTATTTTTGTTTTTACAATGTTGCTT ..x....................:...........:x:.:....::. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 71167671 NA +3794 chr4 + 190214555 131961471 131961470 131961664 194 ACAAAGCTAGACTCTGTCTCAAAAAAAAAAAAAAAAAGAAAGAGAGAGAAGAAAACAACATTATTAACCTCGAATGTAAACAAGAATAATAACAATTTATAATGAGTTTACA-----ACCTATATAAAAATA-AATTACATGACAATAACAGAACAAC--AGGATAAAA--TAATGAAAATGTTACTTCATGATACTGTATGTA chr4 - 94230402 78791804 78791803 78792004 15438399 15438398 15438599 201 ACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAATCACAAAACTAGCAATGAACACAAATGAGCCTGAAGAACCCTTCTTTCAAAATTTCATGCTTCCTTATGAGAAAATATAATTTTGTGTTAATAACAAAATGACAAAGAATAACACCTATTTAAA---TTACTTAATCAACTTATCTGTA .....:.x.:xxx.....:x..::...........:...:.......:.x.....:x...xx.:..:.xx:...:::...::..xx.:.x:.xxx:..x.xx::.:x..x..-----x.:...:x:......-....x::..x:.......:..::..--..:....x.--..x.x...---......x..x.xx:.:.x.... 112M5I15M1I25M2I9M2I8M3D22M 122/191 63.9% 201/94230402 0.0% 13/191 6.8% 53169667 NA +3227 chr4 + 190214555 131962738 131962737 131962808 71 AAAAAAAAAGAAAGAAAAAGAAAAAAGAAAAAAAAAATGTATGTATATATATATATATATATATATATATA chr4 - 94230402 86407069 86407068 86407139 7823264 7823263 7823334 71 AAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA ...:x....:...:........x......xxxx..:..x.x:::.x......:.:.........:...:.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 45555669 NA +3079 chr4 + 190214555 131979324 131979323 131979365 42 GAAAATATGTTACATATATATGTGTGTGTGTGTGTGTGTGTA chr4 - 94230402 27034816 27034815 27034857 67195546 67195545 67195587 42 GAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATA ..:...x.:...:........................:.:.. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 104944508 85270047 +3461 chr4 + 190214555 131979334 131979333 131979414 81 TACATATATATGTGTGTGTGTGTGTGTGTGTATATATATATAATATAAAAATAT------ATATTTATTTTTATATATTTATATATA chr4 - 94230402 48089507 48089506 48089593 46140810 46140809 46140896 87 TATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACAAAATAATAGTGTAACATTTATTGCAATACATTTGAATGCA ..:...:.::.......:....x.x......:.........x.:.:....xx..------.:.......x:x...:....:x..::. 54M6I27M 59/81 72.8% 87/94230402 0.0% 6/81 7.4% 83889827 NA +3630 chr4 + 190214555 132000912 132000911 132000986 75 CTGCAGCCTTGACCTCCCTGGCTCAAGCAGTTGTCCTACCTCAGCCTTCCAAGTAGCTGGGACTACAGGTGCACC chr4 - 94230402 18197126 18197125 18197200 76033203 76033202 76033277 75 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACC ..:.....:x:.x..:.:x..:.....::x..xx.xx:x.........:...........:......x....... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 113803786 76410769 +3248 chr4 + 190214555 132011094 132011093 132011151 58 CAAGTATTTTTCTAGCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 9524457 9524456 9524514 84705889 84705888 84705946 58 CAAGCCTCTTTAGGGCTGTTTTTTTTTTTTTTTTTCCATTTTTTATTCTTAAGACAGA ....:x.:...xx:..x..................::x......x..:..:....... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 122486637 67727918 +3042 chr4 + 190214555 132011101 132011100 132011151 51 TTTTCTAGCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 71837906 71837905 71837956 22392447 22392446 22392497 51 TTTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTTAAATAGA ....:.:.:.............x...x...x....x.......x.:.:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 60173195 NA +3004 chr4 + 190214555 132056956 132056955 132057002 47 TTTTATCTGTTTTTTTTTTTGTTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 60053862 60053861 60053908 34176495 34176494 34176541 47 TTTTATGTGTTTCTTTTTTGGTTTTGGGTTTTTTTTTTTTTTTTCTT ......x.....:......x.....xxx................:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 72003094 NA +3019 chr4 + 190214555 132072882 132072881 132072935 54 TATATGTGTGTGTATACACTCACACACACACACACACACACACACACACGTACA chr4 - 94230402 8395817 8395816 8395870 85834533 85834532 85834586 54 TACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:..:...:..:x....:.x.:.................x.....x.:.x.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 123677065 66537490 +3090 chr4 + 190214555 132080307 132080306 132080394 88 TCATGCTAAAAAACAAAACAAAACAAGCAACGAAAACAGAAATAAGGATGTTTTTACTACTGTACGGCATTGCTTTTTTGCCTTTCAG chr4 - 94230402 31015343 31015342 31015427 63214976 63214975 63215060 85 TCATCCTAAAAAACAAAACAAAACAAACAACAACAAAAACAACAAAGA--TTATTGACACT-TGGAGAATTTCTGCTTTGTTTCACAG ....x.....................:....:.x..x.:x..:..:..--..x..:x:...-.:x:.x...x..x:....::.:x... 48M2D11M1D26M 61/85 71.8% 85/94230402 0.0% 3/85 3.5% 101064964 89149591 +3289 chr4 + 190214555 132081183 132081182 132081272 90 CTCTCTCTCTCTCTCTCTCTCACACACACACACACACATAGCAGATTGTAGTTGAAATCC--TACTATTCCATTAAAACTATAAACTCAATT chr4 - 94230402 51342068 51342067 51342155 42888248 42888247 42888335 88 CTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCACCATATCCTATTTCAAAATCTGTAATATGGAATTAAAA----AAACTAAATT ....x.........................xx..x..x:.x..x..:x..x..x...x:.--..x...xxx.......----.....x.... 60M2I16M4D10M 67/86 77.9% 88/94230402 0.0% 6/86 7.0% 80739115 NA +3079 chr4 + 190214555 132098942 132098941 132099011 70 TTCATGGGTGTGTGTGTATATATACATATATATATATGTATATATACACACACATATATATATATACACA chr4 - 94230402 47095157 47095156 47095226 47135177 47135176 47135246 70 TTTAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ..:.x.:.....:....:.:.:....:.:...:..:.::...x.:xx.:x..::.:...::......... 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 85003785 NA +3208 chr4 + 190214555 132098944 132098943 132099016 73 CATGGGTGTGTGTGTATATATACATATATATATATGTATAT----------ATACACACACATATATATATATACACATATAT chr4 - 94230402 8395787 8395786 8395869 85834534 85834533 85834616 83 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ....x....:.....::...x....:...x..:..:.:...----------...........:.:.:.:.x.:...x..:x.. 41M10I32M 54/73 74.0% 83/94230402 0.0% 10/73 13.7% 123703157 66511398 +3655 chr4 + 190214555 132116030 132116029 132116134 105 TTTATATTATAAATTGGGTATATATATATCATTAATCTATATTCATTCTAGAAACAATGTCATATATTATTATATTTTGTTAATGTTATTTTATATTATTATAAT chr4 - 94230402 15765065 15765064 15765166 78465237 78465236 78465338 102 TCTACATTTTAAA---AGTAAATATATACCATTAACCAATATTCATTTTAAGAAAAATGCATTAAATCATTGTAGCAGATAAATGGTGTATGAAATTCTTATAGT .:..:...x....---:...x.......:......:.x.........:..::..x....:xx..x..:...:..x:xx:.x....x.:.x.x.x...x.....:. 13M3D89M 71/102 69.6% 102/94230402 0.0% 3/102 2.9% 116350965 73863590 +3655 chr4 + 190214555 132116030 132116029 132116134 105 TTTATATTATAAATTGGGTATATATATATCATTAATCTATATTCATTCTAGAAACAATGTCATATATTATTATATTTTGTTAATGTTATTTTATATTATTATAAT chr4 - 94230402 15762885 15762884 15762986 78467417 78467416 78467518 102 TCTACATTTTAAA---AGTAAATATATACCATTAACCAATATTCATTTTAAGAAAAATGCATTAAATCATTGTAGCAGATAAATGGTGTATGAAATTCTTATAGT .:..:...x....---:...x.......:......:.x.........:..::..x....:xx..x..:...:..x:xx:.x....x.:.x.x.x...x.....:. 13M3D89M 71/102 69.6% 102/94230402 0.0% 3/102 2.9% 116353145 73861410 +3032 chr4 + 190214555 132191072 132191071 132191132 61 TACACATACACACACACACACACACACACACACACACACACACACATAGACACACACACTT chr4 - 94230402 90815415 90815414 90815475 3414928 3414927 3414988 61 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTT .::.::.......:..xx::::......:...x.....::........::.....x..:.. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 41375657 NA +3441 chr4 + 190214555 132221254 132221253 132221326 73 GTAGGTACAAAATATAAAATCTTGTGGTTTTTTTTTTGTTTTTTTGTTTGTTTGTTTGTTTTTTAGAATAAGA chr4 - 94230402 16806150 16806149 16806214 77424189 77424188 77424253 65 GTAAGTTCAAAATTTAGAAT--------TTTTATGTTGTTTTTTTGTTTGCTTGTTTACTTTTTGGAAGAAAA ...:..x......x..:...--------....x.x...............:......::.....:...x..:. 20M8D45M 53/65 81.5% 65/94230402 0.0% 8/65 12.3% 115415104 74799451 +10962 chr4 + 190214555 132245761 132245760 132246215 455 TGCTAATTCTAAATCAGTCAAAGAGACAGTTAT-------ATGCATTGTGTA-AACCAGGTTGTAACCCTGGCTTATGCCAGGAAAAATGGTCTTGTCAATGAGCATGGGAAAAATTTACTATCTCCAAA---TTCAGATTTTTCCCCTTTTGCTTTTTGTATTTTTCAATATTTTAGAATCAATATTTGGTT---------TGAAATATAGCAAAATAGT----TTAAGATATCAAGGGCCATTATA--------------AGAGAATTCATAATTTTTAAACCATCAGTTATTTTATTCT----------AATACAGTAGAATGACAAACTTATGATAAAAGTAAATATATTGTGACAGGGGAAGAAATATGACCTGAGGGTGTCTATGGCAG-ATGAATATAATAAAGGACTTCCATCATGGCTGTTAAATATGAAATGGCATTTTCAGCTACAGAGCTCAATAAATG--CTTTGTAAGCCCTATGGTTTGAAGGCAAAGTAT chr4 - 94230402 66580366 66580365 66580859 27649544 27649543 27650037 494 TGCCAATTCTGACACTGCCAGGGAGAAAGACAACTTCAAAATGTGTTATGTCTGGCTGGGATGAGAGCCAGGTTATTAACAGGATGACTTGTTTTGTGAGTG--TAAGTGAAAAATTCAATACCACCTATGCTTTCAG----TTCCCTCTCTCAGTTCTG-ATGTCTGGAGACTTT-GAACTGATATTTGATTATTTATGAATGCATAATAACCAAATAGCGGCATTAA---ATTGAGAGACATTATCTTCACGGTTGACATAGAGGTTCCCCAACTGCCCATTTCTCGattatttaattatttatttttGTAATACACTTGAATGACAAGCTGCTGATAAAAATAAATACTTTGTGACAAGAGAAGAAATATGGCTTGAGGGTGTCAGTGTTGGAATGAATATCAGAGAGATCTTCCATCACAGCTGTTAAATGTGGAATGGCATCTAAAAATCCACAGCTCAATAAATGGCCATTGTATAGACTAT-ATTTGTAATCAGGGTAT ...:......:.xx.x.:..::....x..x:.x-------...::..:...x-::.::..x..x:.x..x..:.xx.:x.....x:.x.x..:....x.:..--:.x.x........:.x..:.x..x.x---.....----.....::.:.xxx..:..-..x.:.x:.x.:...-...:::.......:..---------..x.xx...:.x......:----....---..::..:.x......x--------------....:x.:.x:..:.x::x.x::x..::......x...x.----------......x.x.........:..xx........:......:x........:.:...........:.:..........x:..x::.-........x.x.:..:x.........::..........:..:........:.xx.:x.x..x.............--.x.....x:xx....-:....x.:x..::.... 33M7I12M1I49M2D26M3I5M4D18M1D15M1D16M9I19M4I4M3D16M14I40M10I83M1I75M2I15M1D17M 307/443 69.3% 494/94230402 0.0% 63/443 14.2% 65665395 NA +3040 chr4 + 190214555 132247740 132247739 132247804 65 ATCACAAAGAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAAATAAAATAAAATAAAATAT chr4 - 94230402 22987027 22987026 22987091 71243312 71243311 71243376 65 ATCAAAAAAAAAAAAAAAAAACAAATTAAAGCAGAATAGTTTAAAAAATACTTGAAATAAAGTAT ....x...:.......x....:...x....::.:....:xx......xx.xx.:.......:... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 109260713 80953842 +3490 chr4 + 190214555 132263405 132263404 132263480 76 TGTTTTTGTTTTTTGT-GTGAGTTTCTTTTCTGTGTGTGTGTGTGTGTGTGTGTGTTGTTGTTGTTGTTTTGTGTTT chr4 - 94230402 3357873 3357872 3357949 90872454 90872453 90872530 77 TGCTTTTGTGTTCTGTTGCGGTTTTCTTTTTTGTAAGTGTGTGTGGTTTTGTGTGTTGTTCTCTTTCTTTTTTTTTT ..:......x..:...-.:.:x........:...:x.........xx.x...........x.:x..x....x.x... 16M1I60M 58/76 76.3% 77/94230402 0.0% 1/76 1.3% 128905532 61309023 +24069 chr4 + 190214555 132266338 132266337 132266792 455 AAATATACTGCAAGAAGGTCTTAAATATTATAAATAGCATTAATACTTTTTTTCTGTTGTTTGGTGGCATATGTTTGGCAAAGAGCGGTAGTAAAAGACTTTGAAGTGGGAATCTCCGTTTTCAGAGAGGAACTTTCGCAGGTGTTGAAGCTGTATGGGCCTCAGATGTTCTTAAAGATCTAAGACAACAGAATTTCTCTCCAAACCATTAAAGTTTGAAGAGCAACTGAACAGATGTTCA-TTGTTTCATTTAATATTTCAGACAGCTGCATAATGGCACTGTGTTGTGGT---------------------TTTTTTTTTTCACTCTTTAAGAACATTTAAAAACTAAACTTGGTTTAAGGTCACTTCTGATGACAGTTTGAACTGG-TCTGACAGCTGTTTAAATGTTTTTGACATCTGCCTGGGAAGATGGACTTCCTGTCTTTCCT----CTGCCTGAATTGATGCTACATGTTTTT chr4 - 94230402 66582598 66582597 66583076 27647327 27647326 27647805 479 AAATTTGCTTCACAAAAGTCAAATAAGACCTTAGTATTATTAATAATTTGTTG-TGATGTTTGGCAACATATGTTTGGCAAAGAACAGGAGTAATAAGCTTTGAAGTGT--ATGTGTGTTTTGAGAGGGGATTTTTCACAGGTGCTGAAGCTGCATGGGTCTCAGATGTTCTTAAAGATCTAAGACAACAGAATATCTCTCCAAACCATTAAAGTTTGAAAAGCAAGTGAACAGATGTTCAGTCCTTTCATTTAATATTTCAAGCAGCTGTGTAACTTCACTGTGTTGAATTTCTCCCCCCTCCCATTCCTCCTTTTTTTTTTCCCCCTCTACTAACATTTAAAAAATAAACTGGGTTTAAGGTCAAGCCTGATGACAGCCAGAGCTGGTTCTGACAGCTGTTTAAATGTTTGTGACATCTGCCTCAGAAGCTGGGACTCGTGTCTCTCTTCTGCCTGCCTGAACTGCTGCAAAACGGCTTT ....x.:..x..x:..:...xx.x.x:x:x.x.:..x:.......x...x..x-..x.......:::.................:.:.x.....x.::..........x--..x.x:.....x....:...x:....:......:........:.....:..................................x.........................:.....x..............-.:x.................::......::...:xx..........x:x.---------------------...........x.:..:..xx............x......x............xx:..........::x..:....-......................x............x:....x...:x:..x.....:..:.----.........:..x...x.x.:.x:... 53M1D55M2D130M1I50M21I76M1I61M4I27M 363/452 80.3% 479/94230402 0.0% 30/452 6.6% 65683740 NA +4057 chr4 + 190214555 132268943 132268942 132269021 79 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCACCCAAGTAGCTGGAATTACAGGTGTGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.............x...x..x.x.......x::.............:....--:...:..... 67M2D10M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 114071817 76142738 +3108 chr4 + 190214555 132309520 132309519 132309597 78 TCTCAAAATGTGTATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATAAATATA chr4 - 94230402 65232543 65232542 65232620 28997783 28997782 28997860 78 TTTCAAGCTATTGATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGACTACA .:....:x.:.xx..x..........:...:....xx.:xx...:..:...:.:....x.x....:...:.:.x..:. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 67076977 NA +3025 chr4 + 190214555 132309542 132309541 132309611 70 TATATATATATATATATATATATATATATATATATATATGTATATATATAAATATACGTATATATTTATA chr4 - 94230402 65232551 65232550 65232620 28997783 28997782 28997852 70 TATTGATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGACTACA ...xx..x..........:...:....xx.:xx...:......:.:......x:..:....:.:x:..:. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 67076991 NA +3000 chr4 + 190214555 132309554 132309553 132309630 77 TATATATATATATATATATATATATATGTATATATATAAATATACGTATATATTTATATATATACATATAAATATAT chr4 - 94230402 71926809 71926808 71926885 22303518 22303517 22303594 77 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATAT .........x.:.:::..:...:.x....x.:..........x.:xx..:...xx.::..:...xx.x....x.... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 60382745 NA +3161 chr4 + 190214555 132309626 132309625 132309699 74 TATATATATATATTTATATATACACACATATACATATAACTTAAAAGAACATATGACTAGTGTTTCTCCTCTTT chr4 - 94230402 65311259 65311258 65311332 28919071 28919070 28919144 74 TGTATGCATATATTTATATATACACACATATATATGGACTGTGCAAAAACAGTGTATGCGTGCTTTTCCCTTTT .:...::.........................:..:x.x:x.:x..:....xxxx.:xx...:..:...::... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 66998367 NA +9734 chr4 + 190214555 132317863 132317862 132318197 335 TTTCTTTTTCGAAA----TAGGTATTAATGCAGATACTATAGTCT-GAGTGTTGGCATTTTCTCACA--TGAAGAATGAGATATGCCCTCAGGTTGCCATCAAATGCAGCCAAACATAGAATTTGTCTTGCTTTGCATGAAGCACAGTGATACTTTCTCAAATATTAAAAAAGACAACAGATGGTGAAACTTTAAGCTAGGCATGTT---AAGCTTCTGACACATCTTCAGAAC-ATTTTTGCCTAATTTTCTTTAAATATAGATCGGGATAAACATATATATTTGATGAATAAGCATT-TTTCTTA---------------TGGCTTTTTAATTAAT------AAATAATTAAGTGCTGATAGAAAT chr4 - 94230402 66528603 66528602 66528970 27701433 27701432 27701800 368 TTCCATCTTCTAAAAAGTTAGATGTTGCCATTAATTCCATAGGCTTGTGATTTAGTACTCTCTCACACCTGATGCTTTGCACATGCCCCCTGGCAACCACCAATTGCAGTGGAGACTGAAATTTGTCTTGCTTTAGGTGAAACAAAGTGATATTTACTGAAATATTAAACAGGAGAACAGATTGCGAAACCCCAGGCTAGACATCATCAGGAGCTTCGGAGACATCTTCAGGGCAATTTTTTTCTACTTCACTTCATAAGTAGGATAAGGTAAACACCTAGCCTTTATGAGCAAACATTGCTTCTTAAAAACCCATAGGCAGAAGATATTTACTTACTTACAAAAGAAAGTTAAATTCTGATAGAAAT ..:.x.:...x...----...:.:..:x:::x:..x.:....x..-.x.xx..:.:.:.:.......--...x.xx.x:x.:......:.x..:x:...:...x.....:x:.:xx.::...............:x:....:..x.......:..x..x..........x.:..x.......x.:.....:::.:.....:...xx.---:......x..x..........::.-......x:...x..:x...:.x.x:...:x:::.:......:x..xx:..x....::..:....-:......---------------x:.x.x....x...x.------.:.x.:....:.x........... 14M4I27M1I21M2I138M3I24M1I64M1I7M15I16M6I24M 229/335 68.4% 368/94230402 0.0% 33/335 9.9% 65789260 NA +3655 chr4 + 190214555 132361702 132361701 132361778 77 CTGCAACCTCCACCTCTCAGGTTCAAGTGATTCTCATGCCTCAACCTCCTGAGTAGCTGGAATTACAAGTGCATGAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx.x..::::..........x...x..x.x....:...::::...........:....x.....:x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 114164576 76049979 +3025 chr4 + 190214555 132387087 132387086 132387121 35 AAAACAAAACAAACAAACAAAAAAAACCAAAAAAA chr4 - 94230402 60416065 60416064 60416099 33814304 33814303 33814338 35 AAAACAAAACAAACAAACAAAAAAAACCTAAAAAA ............................x...... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 71971022 NA +3966 chr4 + 190214555 132408852 132408851 132408973 122 TGGGTTGATAGGTTTTTGTTTGTTTGTTTGTTTAGTTGGTTGGTTTGTTTTTGTTTTTTGTG-TGTTTTTTTTTTACAGCACTTTAAAGATG-------TTACTTCATTGTATTTTTTCTTACATGGCTT chr4 - 94230402 36775827 36775826 36775952 57454451 57454450 57454576 126 TGGTTTGGTGGGTTTTTGTTTGTTTGTTTG----GTTGGTTGGTTGATTTTTGTTGTTGTCGCTGTTTTGCTTTAATATTTGCTTTAAAATGAAGAAGATAACTCCAACGCATTGGTTCATATGCAACTT ...x...:.:....................----...........x:........x..xx:.-......x:...x.:.x:xx:..x..:...-------.x...:..x:.:...xx...x..:::::... 30M4D28M1I29M7I31M 85/118 72.0% 126/94230402 0.0% 12/118 10.2% 95633025 NA +3284 chr4 + 190214555 132453622 132453621 132453714 93 TGCTGTTTGATACAATAATAGGGTGACTATTGTCTACAAATATAAAATTAATTGTATATTTAAAAATAAAGAATATAATTGGATT-----GTTTGTAA chr4 - 94230402 51110099 51110098 51110196 43120207 43120206 43120304 98 TACTGTCTGATACAGTATTATAGAGACTATTTTTCATAAATTTAATATGTGCTATGGATATAAAATCAGGAAACAGAACTGGATTTCCTGATTTGTAA .:....:.......:..x..x:.x.......x.::.:....x...x..xx::.:.:x..x.....x:.:::..:.x..:......-----:....... 85M5I8M 63/93 67.7% 98/94230402 0.0% 5/93 5.4% 81343523 NA +3227 chr4 + 190214555 132468921 132468920 132468975 55 TTATATGTATATATATATATATAAATATATATATATAATGAATAAATTATGTTTC chr4 - 94230402 10898954 10898953 10899008 83331395 83331394 83331449 55 TTATGTGTGTATATATATATACACATATACACACATAATGATTAAAGAGTGCTTC ....:...:............:.x.....:.:.:.......x....xx:..:... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 121569967 68644588 +3635 chr4 + 190214555 132489606 132489605 132489677 72 CTGCAACCTCCACCTTATGGGTTCAAGTGATTCTCATGCCACAGCCTTTCAAGTAGCTGGGTTTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x...x............x...x..x.x.x...................:x:....x.::. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 114292480 75922075 +3123 chr4 + 190214555 132499715 132499714 132499790 76 AGCATTATATATATATATTGTGTGTGTGTATGTGTGTGTGTGTATATATATACATATATATATATACATGTTTATT chr4 - 94230402 32959565 32959564 32959635 61270768 61270767 61270838 71 AGCTGTGTACCTATACAT-----GAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGTT ...xx.:..:x....:..-----.x....x.....::...:.......:...:...:.x......x....x..:.. 18M5D53M 53/71 74.6% 71/94230402 0.0% 5/71 7.0% 99540150 90674405 +3039 chr4 + 190214555 132499859 132499858 132499926 68 TAAGAAAATGTATGTGTGTGTGTGTATATATATGTACACATATATACACATATACATACATATACACA chr4 - 94230402 47095159 47095158 47095226 47135177 47135176 47135244 68 TAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ..:..:x:..::.........::::.:...:.......:.x.:xx.:x...:.::..:.......... 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 85404700 NA +3308 chr4 + 190214555 132508775 132508774 132508848 74 CTGCAACCTCTGCCTCCCAGGTTCAAGTGATTTTCCTGCATCAGCCTCCCGGGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::..........x..:x.xx.xx.......::.::........:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 114311649 75902906 +3186 chr4 + 190214555 132514134 132514133 132514195 62 TTCTACA-AAGAGAAGCAACTGACCTAGTAAGGAACTGACTCATATTAATGATAAAAATTAGT chr4 - 94230402 18117985 18117984 18118047 76112356 76112355 76112418 63 TTCTATACAAGGGAGAAAACTGAGCCAGTAAGGAACTGACTTATATGAGTAGTCTAAATTAGT .....:.-...:..::x......x.:...............:....x.:.::.xx........ 7M1I55M 48/62 77.4% 63/94230402 0.0% 1/62 1.6% 114396149 75818406 +3168 chr4 + 190214555 132514186 132514185 132514270 85 AAAAATTAGTATGTGTGTATATATATATACACATGTACATACACACACAGACATG-CATACATAAATATTGTTTCTGTAGTATAAA chr4 - 94230402 64433209 64433208 64433294 29797109 29797108 29797194 86 AAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAATTTCTGACGTAGTTGAAA .......xx.x...............x.......::...::..:..::.x::...-...::::.:.x...x:.xx:.....xx... 55M1I30M 58/85 68.2% 86/94230402 0.0% 1/85 1.2% 68080977 NA +3149 chr4 + 190214555 132545642 132545641 132545689 48 CATTTTCAAAAAAAAAAAAAAAAGAAGTCGTATCTGAGATTCTTTATG chr4 - 94230402 66815675 66815674 66815722 27414681 27414680 27414728 48 CATTTTACAAAAAAAAAAAAAAAAAAGTTATATTTGAAACTCTTCATG ......xx...............:....::...:...:.:....:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 65729967 NA +30177 chr4 + 190214555 132567503 132567502 132568306 804 ATATTTAAATAATTACATTTTCTTGCTGTGACAGTCATAACCAAATCACAGACACATTTCTC---TACTGAAAAACATATGAAAACCAGATAA----AAAGAAAATCCCTCTTC--CTAGCAACAAGCATTGTACTAATCTTCTTTAAGTTGCTACACCCTGCTCCACTTCAGT-GTTAATGTCCTTCAAAC-TACAGAACTACTCATATCTGACTGAGCTCAACCATTCAGCCTAATTGAAAAGAAATACAAGTAATCTAAGAAACAACTAAAAAACTTAGTGAAAACGTAACTTGTCATTCTCTTTCTTAATATCATTTCAAAGAGGTATTAAAGCAAATGTAGGAAGCATTTT---ATTTTTCTTCTGATGTCATCTTTTTTTTCCTCCTCAGAGAAATATCTAACCACCAAAAGACAATTGTGTCTTTAAGTCTAGAAAAACACTCAAAGCCCAGTTATGTATCTCTTTGAA-------------------GAATAATTTTCCTATCATCAATTAATCTCATTTGGAAATTATTTTTAAAATATGATTTATGCAAAACAAATCCCCGTTCCCAAAATAACCTGAATTTGAGGTTGTTATGCCACAGCTAGAAGAGAAATTACTTATCAGTGAACTGTGTCAGAATGTCAATGTGAACTGCAGCTTAGATTAGGAAATCTGATGAAGCATAACATACCATGAAAGAAAT-CAAACATTTTATTGGACTCTTGGGCATTATTGACAGGTTTCTACTACTTTTTAGAT----TTGTTTTATCCAATAGGAGATCTTACTTCTACAGAGCCCTTTTTAAATATAATAAAATGCTCCATTAAA chr4 - 94230402 66418660 66418659 66419484 27810919 27810918 27811743 825 ATGTATAGATATATATAATACTTTCTTGTAATAATTATATCTATTCAATGCATACTATCCTTGCTTAATGGCAAACAT--TAAAACAAGATACTTACAAAGACAAACCCTTGTCATTTGGCAAAGAAAACTGCAATAATCCTCTGCTTCTTGCT---CCCCCCTCCATTTTAATTGTTAATATCTTTTCAGCATGCGGGAGAAGTAATCTCCTACCACGCTAAAGCAGTCAGCCTAATTGAAAAGAAATACAAGTCATCTAGTGCACAGCTGAAAAATTCAGCTAAAATGCAATCTGTCATTATCTTTCCAATGCCAATTTTAAATAGGTATTAAAGTAAATGGGGGAAACATCTTCTCATTTCTCTTGCGGTATCATTTCGTTTTTAC-------AGAAATCCCTAATCCTCAAATGAAGATTCTGCCCG-ATACCCAACAAAACACTCAAGACTCAGCCTCAAGTGTCTTGGAAACCAGATCCAAAAATAGCGGAATAATTTCCCTATCATGAATTAATCTCATTTGAAAATGATTTTAAAAATACAGTTTATGCAATGCAAATCCTCACTCCCAGAATAACCTGTATTTGTGGTTGTTATGCCACAGTCAAGAGATAAATTACTGCTCAGTGAGCTGTTTCAGCATGGCAACGTGAACTGCAGCTAGGATTAAGGAAACTGATGAAGCATAACATACCATGAAAGGAATGAAAACATTTTATAGGACACATGAGTATTATTGACAGGTTT---CTACTTTTTAGATACAATGAACTCTTTCAGCAGGAGATCCTATTTGAAAAGTATCCTTTATCAG-AAATTTATATGCCACATTTAA ..:.x..:...xx..:.x.x::..x:...:.:.:.:...x.:.xx:x.::x.:..xx.:..:---..x..:x......--x.....x.....x----.....x..x....:x..--:.:....x:.:x.:..:.x.....:...x:xxx.....---...:x.....:..:.:.-......:..:..:x.:.-.:.:.:.xx.x.x..x..:x..::x...x..x..x...........................x.....:x:x...:..:.....:.:..:x....:.:..::.......x......:x.xxx:x....:...x...........:.....x:....:...:..---....:....x:.:.:....:.:x.....x.-------......x:....:.x:....x..x:...x..:.:x-.x::.:.:x...........::.:...::x::x:.x....x...-------------------.........:........x...............:....x.....x......:::.........x:.......:.::.....:.........x.....x................::.::...x........xx.......:....x....x...x...:.............x:.....:.:..x...........................:...-x...........x....x.x..:.:...............---.............----.x:x:.:x.:..::........:..:..xx.x..x::.....x.x.:-.x.x.x.x....:x....x.. 62M3I13M2D13M4I17M2I38M3D17M1I17M1I163M3I30M7D35M1D44M19I217M1I40M3D13M4I47M1D21M 570/787 72.4% 825/94230402 0.0% 55/787 7.0% 66148843 NA +5082 chr4 + 190214555 132567962 132567961 132568159 198 GAAGAATAATTTTCCTATCATCAATTAATCTCATT---TGGAA--ATTATTTTTAAAATATGATTTATGCAAAACAAATCCCCGTTCCCAAAATAACCTGAATTTGA-GGTTGTTATGCCACAGCTAGAAGAGAAATTACTTATCAGTGAACTGTGTCAGAATGTCAATGTGAACTGCAGCTTAGATTAGGAAATCTGATGAAG chr4 - 94230402 66230853 66230852 66231056 27999347 27999346 27999550 204 GGGAAAAAAGCTTTTTACCTCAGATTAATCTCACTGCATCGACTTATTAATTTTAAATTAAGTAATATACAATGTCAGGTCCTGTTTTGATTAGAACCTTGCATTGATAATTGGCACACAGAAGTCTGAAAATAAATTACTGATCAGTGAACTGCTGAAGAATGTAAACTTGAACTGCAGGTATGATTAAACAATCAGATGAAG .:::..x..x:..::..:.x:x:..........:.---.x..x--....x.......x..x.xxx...:...x::x.:x:..:...::x.xx.x.....x:xx....-::...x:.::.x:x..::x...:.x........x............:xxx.......x..:x..........x.xx.....::x....x....... 35M3I5M2I62M1I96M 128/198 64.6% 204/94230402 0.0% 6/198 3.0% 66337109 NA +3547 chr4 + 190214555 132592894 132592893 132592981 88 AGAAGAAAGAAAGAGAAAGAGAAAGGGAAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAGA chr4 - 94230402 40465777 40465776 40465860 53764543 53764542 53764626 84 AGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAA----GAGGAAAGGAGAGGGGAAA .....::.x:.x:....x......:..x..:....x:::...:..x...x.x.:....::..::.----....:....:.......:. 65M4D19M 58/84 69.0% 84/94230402 0.0% 4/84 4.8% 92127117 NA +3153 chr4 + 190214555 132592906 132592905 132592996 91 GAGAAAGA--GAAAGGGAAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAGAGGAAGGGAAGGGAAG chr4 - 94230402 40465776 40465775 40465868 53764535 53764534 53764627 93 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .....:.:--..x.:.:.x.:...::..x:.:....x:::.....:x..:x.x.:....::..:...:...::.......:::::...x:... 8M2I83M 56/91 61.5% 93/94230402 0.0% 2/91 2.2% 92127130 NA +3053 chr4 + 190214555 132592908 132592907 132593001 94 GAAAGAGAAAGGGAAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAGAGGAAGGGAAGGGAAGGGAAG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .:.::..::.x.:x.:.:.x.:.:.::..x..:.:..x:.:...:.:x..:x.x.......:..::..:...:....::..:::::...x:... 94M 53/94 56.4% 94/94230402 0.0% 0/94 0.0% 92127133 NA +3346 chr4 + 190214555 132592914 132592913 132593006 93 GAAAGGGAAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAGAGGAAGGGAAGGGAAGGGAAGGGAAG chr4 - 94230402 40465776 40465775 40465868 53764535 53764534 53764627 93 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG ..:.:..:.x.:x.:.::x.:.:..:..x..:....x:::...:..x...x.x.:....::..::.......:...::..:::::...x:... 93M 55/93 59.1% 93/94230402 0.0% 0/93 0.0% 92127138 NA +3373 chr4 + 190214555 132592923 132592922 132593040 118 GGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGGAGAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAGGAAGAAGGAAGGAAG chr4 - 94230402 93301097 93301096 93301211 929192 929191 929306 115 GGGCAGCAGTGGGGAAGGAAGGAGCAG---ATGGGGAAAGGAGGAGCAAGCCAGGGAGTGACAAGCAAGTGAGTGGATGTGTACGAAGGAGCAGGGAGGAGAGAGAGATGGAAAGGAG ...x..x:.x........:::.:.x..---.x...:.::.....::x::.xx:.....x.:x.:.x...x..:x...x.x.x.x.:.:.:.x.....:.:...::...x....:.:.. 27M3D88M 71/115 61.7% 115/94230402 0.0% 3/115 2.6% 39291826 NA +3208 chr4 + 190214555 132615582 132615581 132615638 57 AAACATTTTTAAACACACATACACACACACACATATATATATCCATATGCATATATT chr4 - 94230402 87372738 87372737 87372794 6857609 6857608 6857665 57 AATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATT ..x:....::.........:...x..........x....::.x::..:.:....... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 45242844 NA +3031 chr4 + 190214555 132624519 132624518 132624570 52 CCTCTTCTGCTTTCTTCTTCTCCTTCTCCTCCTTCTCCTCCTTCTCCTCCTC chr4 - 94230402 46353427 46353426 46353478 47876925 47876924 47876976 52 CCTCCTCTGCTTTCTTCCTCACCTTCTCTTGCACCCTAGCCCTCTCCTCCTC ....:............:..x.......:.x.x:.::xx..:.......... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 86271092 NA +3689 chr4 + 190214555 132650408 132650407 132650532 125 AAAGAAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAGAGAGAG-AGAGACAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCA---AGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x......:........:..:::::..:.......xx.x..:.:..-.:..:.xx.---...x.....xx....x...:::.x:::..:.:.:.:.....:x.xx::.:.:..:..:..x.... 48M1I9M3D65M 78/122 63.9% 123/94230402 0.0% 4/122 3.3% 102117244 88097311 +4081 chr4 + 190214555 132650422 132650421 132650548 127 AAAGAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGACAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGA--GGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGA--AAGGAGAGGAATAAAG ...x.:....:..........::.--:.:......:....x.x..:.:..x..:::xxx....x.:...xx..:.x...::..x:.:....:.....::...x.xx.:.--..:..:..:..x.... 24M2D83M2D16M 82/123 66.7% 123/94230402 0.0% 4/123 3.3% 102117258 88097297 +3498 chr4 + 190214555 132650427 132650426 132650527 101 GAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGACAGAGA----GAGAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x.....:..:x:x:....----..x....xx.:x::..:.x.x.....:x..x..::...:.x..:........:..:.x.:. 40M4I61M 68/101 67.3% 105/94230402 0.0% 4/101 4.0% 71315726 NA +3850 chr4 + 190214555 132650458 132650457 132650584 127 AGACAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGAC-AAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG .:.:.:.:..::.........::.:.:......:...xx.x..:....x..:::xxx....x-.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....---..:..:..x.... 62M1D48M3D13M 80/123 65.0% 123/94230402 0.0% 4/123 3.3% 102117294 88097261 +3270 chr4 + 190214555 132650472 132650471 132650563 92 AAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44400476 44400475 44400568 49829835 49829834 49829927 93 AAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:.x.:.:x.x.x.x.x...:...:.:.:::..:....:...........:...........-.::x:...:x...xx.x.:.:..x.:.. 64M1I28M 61/92 66.3% 93/94230402 0.0% 1/92 1.1% 88249996 NA +3155 chr4 + 190214555 132650483 132650482 132650555 73 GAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAGAAAGAAA-GAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44400495 44400494 44400568 49829835 49829834 49829908 74 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ...:...:.:.:.:.......:.......::...:..........-.::x:...:x...xx.x.:.:..x.:.. 45M1I28M 51/73 69.9% 74/94230402 0.0% 1/73 1.4% 88249988 NA +3798 chr4 + 190214555 132650839 132650838 132651006 168 TTTATATTTTGAGTTATATATAAACTCAAATTTATTATATTATATTTA---TTATATATAAT-ATATATATTATATTTATTATATATAATATATATATTATATA-TATTATATTTATTATATATATTATGTATATAATATATCTAATATATATTATAAATATATAATATATAT chr4 - 94230402 67909987 67909986 67910154 26320249 26320248 26320416 168 TTTACATTTTAGGA-----ATAAAATCACACTTAATTTTTCATACTAAAAAGGATCTGTAATGATGGCTGCCCACTCTATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAAT ....:.....::.x-----.....x...x.:...x.x.x.:...:.x.---xx..x.:....-..:xx.:::xxx.:.....:.....xx...:xx.xx.....-.....x..x:..x...x....xx........:.....x......:..x....x.:..:.:.x...x.. 14M5D29M3I11M1I41M1I68M 111/163 68.1% 168/94230402 0.0% 10/163 6.1% 64740852 NA +3120 chr4 + 190214555 132650854 132650853 132650951 98 ATATATAAACTCAAATTTATTATATTATATTTATTATATATAATATATATATTATATTTATTATATATAATATATATATTATATATATTATATTTATT chr4 - 94230402 67910065 67910064 67910155 26320248 26320247 26320338 91 ATATACAATACTAAAAATATACTATTAGAT-------ACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATT .....:..xx::...xx...xx.....x..-------.:......x.......:...x..x............:..xxx....:..:.x.x..xx... 30M7D61M 66/91 72.5% 91/94230402 0.0% 7/91 7.7% 64740789 NA +3187 chr4 + 190214555 132682347 132682346 132682390 44 ATGTGTGTGTATCTGTATGTTTATATATATATATATATATAACC chr4 - 94230402 89821281 89821280 89821324 4409079 4409078 4409122 44 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCC ..........x.....:...x...............:..:.:.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 42861066 NA +3091 chr4 + 190214555 132685559 132685558 132685609 51 CAAAACAAAACAAACAAACAAACAAAAAACAAATCTAGACAGTATAAATTA chr4 - 94230402 38540325 38540324 38540372 55690031 55690030 55690078 48 CAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAG---AAATTA .................:...........x.....x..:x..---...... 42M3D6M 43/48 89.6% 48/94230402 0.0% 3/48 6.2% 94145234 NA +3120 chr4 + 190214555 132708439 132708438 132708490 52 GCAGATCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 2972459 2972458 2972510 91257893 91257892 91257944 52 GCAAATCTACTCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTT ...:.....:.......:.....:........::.....x:..:::.x.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 129735980 60478575 +3102 chr4 + 190214555 132720327 132720326 132720426 100 TTTTATATTTATTTATTAATACTCCTCTTTTTTATTATTTCATTCAGTTCAACTTAAATTTTTATCAATATGCCTCATTCTTTTTATGTCATT----ATTTTTC chr4 - 94230402 16181908 16181907 16182011 78048392 78048391 78048495 104 TTTTAAATTTATTCATCTAAATTCCTTTTTTTTTTTTTTTTCTGCAGTATGCTTTAAGCTATCATGGGTATGACTTTGTTGCTTTCTGCCATTTAAAACTTTTC .....x.......:..:x.x.:....:......x..x...:x.x....x::x:....::.x.:..x::....x..:xx.:x:...x..:....----.:..... 93M4I7M 66/100 66.0% 104/94230402 0.0% 4/100 4.0% 116538419 73676136 +3052 chr4 + 190214555 132750398 132750397 132750483 86 TATCTTTTCTCTGAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGAGACCGCGTCTTGCTCTGTCACC chr4 - 94230402 87215244 87215243 87215329 7015074 7015073 7015159 86 TGTCTTTCTGATCAGTTCCTTTCTTTTTTTCCTTTTTGTATTTTTATCTTGCCTGTCTTTCTGAGTTCATGTCTTTTTCTACCATC .:.....::xx.x.:.x::...:.......::.....x.x.....x.:..x::.x.:....:...x:.::.....x:...::..:. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 45535154 NA +3149 chr4 + 190214555 132807501 132807500 132807575 75 CATAAACATGAACATATGTGATCAAATG------GTGTATAACAAGAGTAATAAAAATAAATAATAAATAATGCTGAGAAA chr4 - 94230402 54555097 54555096 54555175 39675228 39675227 39675306 79 CATATGCATGAAGGCGTGTG--CAGTTGCCAGAAATGTATTACAAGCATAATGAAAATAAATAATCGAAAATGCTGAGAAA ....x:......x:::....--..:x..------:.....x.....x:....:............x:.x............ 20M2D6M6I47M 57/73 78.1% 79/94230402 0.0% 8/73 11.0% 78252404 NA +3151 chr4 + 190214555 132816213 132816212 132816258 46 TTTTTATATAAATTCTTCCCCTCCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 24714105 24714104 24714150 69516253 69516252 69516298 46 TTTTCACATAAATCCCTCCCCTCCCCTCTCCTTTTTTTTTTTTTTT ....:.:......:.:........::.:.::............... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 108102108 82112447 +3156 chr4 + 190214555 132859003 132859002 132859094 92 TGGCACCAT----CACAGCTCACTGCAATCTTGACTGCCTGGGCTTAAGTGATCCTCTCAGCTCAGCCACTCCAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTTCTACAGCCCA----AAGCTT------CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:...----:.....:..----..x...------.....:.:.....x.:.x.xx:........x:..x.........:......x.x.... 9M4I9M4D6M6D58M 64/82 78.0% 86/94230402 0.0% 14/82 17.1% 114661889 75552666 +3115 chr4 + 190214555 132872530 132872529 132872621 92 AGCTGAAAAATGCAACTGGCATACTGAAAAATGCATCAGAATCTTTTAATATAAGACTGGATCAAGAAGAAGAAAAAATAATGAGCTTGAAG chr4 - 94230402 57417470 57417469 57417561 36812842 36812841 36812933 92 AGGTAAATGATGCAACTGCGACATTGAAAAAGGCACCATCATCTTCTTAAATCAACAACAACAAAAAAAAAGAAAAAAAATTGAGTTTATAG ..x.:..x:.........xx.:.:.......x...:..xx.....:.x.x..x.:xxxx:.:x..:..:.........x.x....:..:x.. 92M 61/92 66.3% 92/94230402 0.0% 0/92 0.0% 75455060 NA +3005 chr4 + 190214555 132899569 132899568 132899626 58 TACTTGTCTCTGTGTGTATGTGTATATATATATATATATATATATATATGCTCTATAT chr4 - 94230402 19559286 19559285 19559343 74671060 74671059 74671117 58 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ..:..x.:.:.......:.....:................:.xx..xx.x:.x..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 113340283 76874272 +3024 chr4 + 190214555 132903508 132903507 132903556 49 GTATAATAATAATAAAAGAAAAAAAAAGAAAAAGAAAAAAA--AGACTTCT chr4 - 94230402 68392374 68392373 68392424 25837979 25837978 25838029 51 GTATAATGACCATAAAAGGAAAAAAAAAAAAAAGAGAAAAATGAGACATCT .......:.:x.......:........:.......:.....--....x... 41M2I8M 42/49 85.7% 51/94230402 0.0% 2/49 4.1% 64511134 NA +3101 chr4 + 190214555 132983119 132983118 132983180 62 TGGTTTGTTTTGTTTTTAGTGTTTTTGTTTGTTTGTTTGTTTTGTTGTTTTCTGGGGTTTTG chr4 - 94230402 25878338 25878337 25878399 68352004 68352003 68352065 62 TGGCTTGTTCTCCCTTTGGTGTATTTGTTTGTTTGTTTGGTTTTGCCTTTCTGGGCGTTTTG ...:.....:.x::...:....x................x...xx:x...::x..x...... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 107104781 83109774 +3195 chr4 + 190214555 133010842 133010841 133010933 92 ATATATATACACATATATATACACATATATACACACATATATATACATATATACACACATATATACATATATACACATATATATACATATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x::......xx:.:..:...:::.:.x:::::..x....::....:...:::.x.......x..x..:.x......:..x:...::.:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 105067305 85147250 +3972 chr4 + 190214555 133010869 133010868 133010989 121 TATACACACATATATATACATATATACACACATATATACATATATACACATATATATAC--ATATATACATATATATACATATATATACACATATATATACATATATACACATATATACATAT chr4 - 94230402 73121102 73121101 73121224 21109179 21109178 21109301 123 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .:.:..::.....x:.....:.........x.x::..:x:..:....::...x:..:..--:.....:::x:..:...:.x...:::x....x.x.:.:....:....x:..x..x.x.x... 59M2I62M 77/121 63.6% 123/94230402 0.0% 2/121 1.7% 59889767 NA +3748 chr4 + 190214555 133010907 133010906 133011023 117 CATATATACACATATATATACATATATACATATATATACATATATATACACATATATATACATATATACACATATATACATATATATACACATATATATACATATATATACACACAT chr4 - 94230402 73121100 73121099 73121216 21109187 21109186 21109303 117 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.:.::.::.....x:.....:.......:.x.x::.::x:..:....::...x:..:..:x:....::::x:..:.:...x...::.x..:.x.x.:...:..:....x:..x.. 117M 69/117 59.0% 117/94230402 0.0% 0/117 0.0% 59889807 NA +3015 chr4 + 190214555 133010954 133010953 133011017 64 ACACATATATATACATATATACACATATATACATATATATACACATATATATACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x.........:..:::x..::x.::.:.x.:.:..:........... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 115490205 74724350 +3135 chr4 + 190214555 133039005 133039004 133039121 117 ATATATGACAAAATATATAACATATATATGTGT--------------GTGTACATATATATGTGTGTGTGTGTGTGTATATATATATATAAAATCACATTTTCTT-TATCCATTCATCAGTTGATTGACACA chr4 - 94230402 15949016 15949015 15949145 78281258 78281257 78281387 130 ATACAAGACAAGGTAGATCTCAGGCATATGACTTAGGTTAAAAGGCAATTTATATATATATATGTGTGTGTGTGTATTAATACACCCATATAACCTCATTTCCTTAGATACTTTTGTCA--TGATTATCATA ...:.x.....::..x..xx..x::.....xx.--------------:.x..:........:.............:.xx...:.:x:...x..:.x.....:...-x..x.x..::...--.....:x..:. 33M14I58M1I13M2D11M 80/115 69.6% 130/94230402 0.0% 17/115 14.8% 117089989 73124566 +3082 chr4 + 190214555 133118865 133118864 133118921 57 ACACACACACACACATATATATGTACATGTATGTGTGTATATATATGTATATATATA chr4 - 94230402 53500328 53500327 53500384 40730019 40730018 40730075 57 ACACACGCAGAGGCACATACGTGTGCATGTGTGAGTGCATATATATCTGCATATGTA ......:..x.x:..:...::...:.....:..x...:........x.::....:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 79618537 NA +3111 chr4 + 190214555 133120963 133120962 133121072 110 GACGACAGAGCAAGACTCTGCCTCAAAAAAGAAAAAAAGAAAAAAAAATGCAAACAAGAAAAAAATAAAATCCACTTGCTTA--AGCAAGTTTTATCTGACAGAGGCTCCCT chr4 - 94230402 30218040 30218039 30218151 64012252 64012251 64012363 112 GACAATAAGACATAACACTGCCTAAAACAAGAAAAAAAAGGGGACAAAGGAAAAAAAGAAAAGCCTAAAAACCAATAGACTATTAACAAGAATGAAAATAGAATGGCTCCCT ...:.:.:::..x:..x......x...x..........:::::.x...x.x...x.......:xx.....x...x.x.x:..--.:....xx.x.xxxx.x.:x........ 82M2I28M 72/110 65.5% 112/94230402 0.0% 2/110 1.8% 102902923 87311632 +3588 chr4 + 190214555 133144832 133144831 133144939 108 TCCCCAAAACCAAAAGAAAATATATGCACACACACACATATATATATGCATATGTATACACACACACACACACACACACACACACTTTGGAATCAGTATCACAAACCA chr4 - 94230402 8395777 8395776 8395884 85834519 85834518 85834626 108 TTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTA .:...x.::...x:x.x:x..:.:....:.x...:::..x..:.....:..::x..:.:xx.:.................x....xxxx....x.:x.x.x.....:. 108M 69/108 63.9% 108/94230402 0.0% 0/108 0.0% 124749055 65465500 +3160 chr4 + 190214555 133144854 133144853 133144934 81 TATGCACACACACACATATATATATGCA------TATGTATACACA--CACACACACACACACACACACACTTTGGAATCAGTATCACA chr4 - 94230402 14964814 14964813 14964902 79265501 79265500 79265589 89 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGACTGAATAGGACA .:..x.....x.:.::.x.:::.:....------........:...--........::..............x.x..x.x.:..xx... 28M6I12M2I41M 60/81 74.1% 89/94230402 0.0% 8/81 9.9% 118180040 72034515 +25889 chr4 + 190214555 133150344 133150343 133152035 1692 GGAGACAGGGGTGCTGTACGTGAACGAGAAAATAGACCGCGAACAAATCTGCAAACAGAGCCCCTCCTGTGTCCTGCACCTGGAGGT------CTTTCTGGAGAACCCCCTGGAGCTGTTCCAGGTGGAGATCGAGGTGCTGGACATTAATGACAACCCCCCCTCTTTCCCGGAGCCAGACCTGACGGTGGAAATCTCTGAGAGCGCCACGCCAGGCACTCGCTTCCCCTTGGAGAGCGCATTCGACCCAGACGTGGGCACCAACTCCTTGCGCGACTACGAGATCACCCCCAACAGCTACTTCTCCCTGGACGTGCAGACCCAGGGGGATGGCAACCGATTCGCTGAGCTGGTGCTGGAGAAGCCACTGGACCGAGAGCAGCAAGCGGTGCACCGCTACGTGCTGACCGCGGTGGACGGAGGAGGTGGGGGAGGAGTAGGAGAAGGAGGGGGAGGTGGCGGGGGAGCAGGCCTGCCCCCCCAGCAGCAGCGCACCGGCACGGCCCTACTCACCATCCGAGTGCTGGACTCCAATGACAATGTGCCCGCTTTCGACCAACCCGTCTACACTGTGTCCCTACCAGAGAACTCTCCCCCAGGCACTCTCGTGATCCAGCTCAACGCCACCGACCCGGACGAGGGCCAGAACGGTGAGGTCGTGTACTCCTTCAGCAGCCACATTTCGCCCCGGGCGCGGGAGCTTTTCGGACTCTCGCCGCGCA--------CTGGCAGACTGGAGGTAAGCGGCGAGTTGGACTATGAAGAGAGCCCAGTGTACCAAGTGTACGTGCAAGCCAAGGACCTGGGCCCCAACGCCGTGCCTGCGCACTGCAAGGTGCTAGTGCGAGTACTGGATGCTAATGACAACGCGCCAGAGATCAGCTTCAG---------CACCGTGAAGGAAGCGGTGA---------GTGAGGGCGCGGCGCCCGGCACTGTGGTGGCCCTTTTCAGCGTGACTGACCGCGACTCAGAGGAGAATGGGCAGGTGCAGTGCGAGCTACTGGGAGACGTGCCTTTCCGCCTCAAGTCTTCCTTTAAGAATTACTACACCATCGTTACCGAAGCCCCCCTGGACCGAGAGGCGGGGGACTCCTACACCCTGACTGTAGTGGCTCGGGACCGGGGCGAGCCTGCGCTCTCCACCAGTAAGTCGATCCA-GGTACAAGTGTCGGATGTGAACGACAACGCGCCGCG-TTTCAGCCAGCCGGTCTACGACGTGTATGTGACTGAAAACAACGTGCCTGGCGCCTACATCTACGCGGTGAGCGCCACCGACCGGGATGAGGGCGCCAACGCCCAGCTTGCCTACTCTATCCTCGAGTGCCAGATCCAGGGCATGAGCGTCTTCACCTACGTTTCTATCAACTCTGAGAACGGCTACTTGTACGCCCTGCGCTCCTTCGACTATGAGCAGCTGAAGGACTTCAGTTTTCAGGTGGAAGCCCGGGACGCTGGCAGCCCCCAGGCGCTGGCTGGTAACGCCACTGTCAACATCCTCATAGTGGATCAAAATGACAACGCCCCTGCCATCGTGGCGC-----CTCTACCAGGGCGCAACGGGA--CTCCAGCGCGTGAGGTGCTGCCCCGCTCGGCGGAGCCGGGTTACCTGCTCACCCGCGTGGCCGCCGTGGACGCGGACGACGGCGAGAACGCCCGGCTCACTTACAGCATCGTGCGTGGCAACGAAATGAACCTCTTTCGCATGGA chr4 - 94230402 64450656 64450655 64452305 29778098 29778097 29779747 1650 GGATAACGGGGAGATCAGCATCGGCGCTAAGATCGACCGGGAGCAACTCTGCCAGAAGAACTTGAACTGCTCCATCGAGTTCGACGTGATCACCCTGCCCACCGACCATCTGCAGCTCTTCCATGTGGAAGTGGAGGTGCTGGACATCAACGACAACTCCCCCCAGTTTGCCAGGGCTCTCATCCCCATCGAAATATCTGAGAGCGCGGCGGTGGGCACCCGCATCCCCCTGGACAGTGCTTTTGACCCAGATGTGGGGGACAACTCCCTGCACACTTACTCCCTTTCCGACAATGATTTTTTCAGCATCGAGGTGAGGACGAGGACTGACGGTGCCAAGTATGCAGAGCTTATCGTGGTGAGGGAGCTGGACAGGGAGCTGAAGTCGAGTTACGAGCTCCAGCTCACCGCTTCCGAT-AAGGGGGTGCCGCAGAAGT--------------------------------------------------------CTGGGTCGTCCCTCCTGAAAATCAGCATTTCTGACTCCAACGACAACAGCCCTGCTTTTGAGCAGCAGTCCTATATAATTCAACTCCTGGAAAACTCCCCAGTTGGGACTTTGCTCATAGACCTCAATGCGACCGACCCAGATGAGGGCGCTAATGGGAAGGTCGTGTACTCCTTTAGCAGTCATGTGTCTCCCAAAATTATGGAGACTTTCAGGATAGATTCGGAGAAAGGACATCTGACCCTCCTGAAGCAAG--------TGGACTATGAAATTACCAAGTCCTATGAAATTGATGCTCAGGCTCAAGACATGGGACCAAATTCTATTCCAGCTCACTGCAAAATTATAATTAAAATTGTGGATGTGAATGATAACAGACCCGAAATTAGCTTAAATTTGATGTCCCCAGAAAAAGAAGAGACGGCTTACATTTCTGAGGGGTCCCCCCTGGACACGTTTGTTGCCCTGGTCAGGGTGCAGGACAAGGACTCGGGTGTAAACGGAGAGGTAGTTTGCAAGCTCCATGGTCATGGCCACTTTAAACTGCAAAAGACTTACGAAAATAACTATTTAATCTTGACTAATGCCAGTCTAGATAGAGAAAAGAGATCTGAATACAGCTTGACTGTAATAGCAGAGGACAAGGGAACGCCAAGTCTCTCCA-CGGTAAAACACTTTACTGTCCAAATCAGTGATGAAAATGACAACCCACCGCGCTTCCAGACAAACAG-ATACGAAGTAGTTATCTTAGAAAATAACTCTCCGGGAGCGTACATCACATCCGTCACGGCCACAGACCCAGATCTAGGGGACAATGGGCAGGTTACCTACACTATACTGGAGACCTCTGTTTTGGGAAGTTCTATAACCACCTATGTGACCATTGATCCCTCCAATGGGGCAATCTACGCCTTGAGAACTTTTGACCATGAAGAGGTAAATCAGATTGTCTTTATGGTACAAGCCAGGGATGGAGGGAG---CCAGCAACTTGTTAGTAACACCACAGTGGTACTAACCATCATTGATGAAAATGACAATGCTCCTGTCATCGTGGGCCCAGCACTGCACAACAGCACGGCGGAAATCTCAATCCCTAAAGATGCT------------GGGATTGGCTTTCTTG-TCACGAGGATAAGGGCTACAGATAGAGACTCTGGTATGAACTCTGAACTCAGCTGCTCCATAGCAGCTGACAAGGAAAACAGCATCTTTGTGATGGA ...x.xx....x.x.xx:.:.x::..xx..:..x.....x..:...x.....x.:x...:.::xxx...:x:.x.xx.x:.x..x..------.:.x.:x:xx:...x:...x....x.....x.....::.x..............:..:......:.....:xx..:x.x::.x.xxx.x.xx.x:.x.....x...........x:..x::.....:...x.....:....x..:..x..:........:.....x:x.......:...:.:x:...xxxx.:x..xx...::::.x:...xx.x.x..x...x:...xx:.:xx..:..::x.x::.x:..x.....x:.xx...x..:.xx:......x.:....x.x.:x..:xx:..x:x:x.xx...x.....xx:x..:-:...:....xx.x..:...--------------------------------------------------------.:..xx..x....x..x.xx...x.x:.x::x........:.....::xx..:.....:..x..:.xxx:...:.:x:.x:xx..x.::..:.....:..xx:x..x...:.xx.x..xx.x.....:..x........:..:......xxx..:..x:................:.....:..::.x..x...x::::xxx....x:....:.:x.xxxx:..x:x.--------...:.xxx.:x..:.:...--------...........:xx.x.xx:x:x..:x..:.xx.:.:x..:..:x.:...x....x..x..:x.::.x..x..x........::.xx..:.xx:.:.xx......:x.....:...:x:..x..:..:.....x.:---------.x.x.x:..:....x.::.:---------x......xx.xx.x.:x.:...xx.x..x.....xx....x...xxx...x:x.....:.:x.x:..:..:x....:xxx...:....x.xx..xx.:.xx.x:..:x:x..xx.:xxxx.:.x::.:...x....:x:x...x.x..::.x...xx:..:..:x....::x.:.:xx:xxx....x.:........:.:..xx:....x:...x:x...x:xx.......-.:....:x.:x.::.-x..x...:.xxxx....x:..:......x.:.....-..:...x..:x.:.-x.....x..:xx.:.xx:x.....:...x:x..x..x..x......xxxx.x..x.xx.....x....x:...xx:..x.x...:.xx...x..:.....x....x..x...xx.:xx:.::x...x.xxxx::.xx:......:..xx.:..::.::.:xxx..:..xxxxx.x......:..x.xx.:..:...:....:x..x.:..xx.xx.::x:...xx...:x.....x....:.xx..x..---....xx:..x.:.:.....:....x..x:xxx.xx:...x:.x...x..........:..:....:........xx.-----..x:..x.x:..:.::...:.--...x.x.x.xx:..:....------------..::::..x..x.:..-....xx.x:.::xx..::::..::x:...xx:..::x....x.:x::....x:.:.xx...x.::xx..:...x....xx.:.x.....xxx..... 87M6I325M1D19M56D228M8I19M8D136M9I20M9I231M1D15M1I36M1I14M1D249M3D77M5I21M2I19M12D16M1D97M 947/1609 58.9% 1650/94230402 0.0% 124/1609 7.7% 68699688 NA +3030 chr4 + 190214555 133184751 133184750 133184830 80 TGTATATATGTGTAAATATATAAATATATATATAAATATATATATTTATATATATATATTTATATATTTACACATGAGAA chr4 - 94230402 17303268 17303267 17303347 76927056 76927055 76927135 80 TATTTGCATACATAAATATAGAAACACACATATAAGTGTATGTCCTCCTACACATATACTCACTCTTCTGCACAAAAGAA .:.x.::..:::........x...:.:.:......:.:...:.x:.:x..:.:.....:.:.:x:x.:.:....x:.... 80M 50/80 62.5% 80/94230402 0.0% 0/80 0.0% 115881483 74333072 +3314 chr4 + 190214555 133211539 133211538 133211620 82 TCAAAAAAAAAAAAAAAACAAAAAACAAAATCAAAAACAAAAAACAAGAAAAG----TCTTGAGTCCTTCAATTAAAAAAAATCTT chr4 - 94230402 18021888 18021887 18021973 76208430 76208429 76208515 86 TCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTCATCTCTTTAAATAATGACCATCTT ...:.....::...x.......x.....x.x...x..x........:.:....----..:.x.x::...:..x...x:.xx..... 53M4I29M 60/82 73.2% 86/94230402 0.0% 4/82 4.9% 115189651 75024904 +3121 chr4 + 190214555 133290572 133290571 133290625 54 TGTATGTGTGTGTGTGTATATATATGTGTATATATATATGTGTATATATATGTG chr4 - 94230402 70982629 70982628 70982682 23247721 23247720 23247774 54 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ...:.......:.....:..:......x:...x..:.:....:...:.:.::.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 62307943 NA +3041 chr4 + 190214555 133303834 133303833 133303872 39 ATCATATATATATGTGTGTGTGTGTATATATATACCATT chr4 - 94230402 27034824 27034823 27034862 67195541 67195540 67195579 39 ATTATATATATATGTGTGTGTGTGTGTGTATATACCTTT ..:......................:.:........x.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 106269010 83945545 +3388 chr4 + 190214555 133303881 133303880 133304184 304 TATACCATTATATATATTATATATGGCATATAATGATATATAATATATA------CCATTATGTAATATTCCATTATATATGTGACCCGT--ATTTCATCTCA-------TATATATGCAATATTATATAATGGTATATATTATATGCCATTATATGTGACCTGTATTCCA----TCATATATATGATATGATTCATA-TGGATCATATAT-------------GATATGGATCATATATGATATT------------CATATGGAATCATATATATGATGGTATACAGGTCACAAATATA---ATGGAATATTATTCATCCAC-----ATATTCATATATATTTCTTTATTCATTC chr4 - 94230402 92961672 92961671 92962015 1268388 1268387 1268731 344 TACACTGTGTTATATATTGTATATGACATATAATGATGTGTGATACATACAGAATCAGTTATATTGTGTCTGTGTGTATATATGATGTGTGAAAGCCCTCTCACCCTCTCTATAAATGCATGAGTACAT----TTATGTGCTCTCTGCCAT---------CTCGGATACCATTTTTCATACCTACAATAGAAAGCACAGTGGATAATGCATTAGCTGTTCAGCAGCTGTGTATACTAAGCTGTACTCACACTGTCTTGCATGTGATATAATATATGTTTAGGTATTGTGGTTTTATGTGTATATGTGAAGCATCTCTCACACACAGCTGATTTTTATGTACACATTTAGACTCACTC ..:..::.xx........:......:...........:.:.:...:...------.x:....:.x:.:.::xxx.:.....:...:x:..--.xx:.x.....-------....x.....xx.x..:..----x...:.::.x.x......---------.::.x..x...----.....:x..::...x:.xx..:.-.....x..::..-------------.x.:..x..xx..x::x:..:.------------...:..:x..x......:.xxx.....xxx...:x:.x:.:..---:..:.::..:x:...:x...-----..x..:..:..:.:x.:.xx.:...:.. 49M6I35M2I11M7I19M4D18M9D11M4I23M1I12M13I22M12I43M3I20M5I28M 185/291 63.6% 344/94230402 0.0% 66/291 22.7% 40342209 NA +3208 chr4 + 190214555 133324771 133324770 133324848 78 ACATAGAATTGGTGCTAAGTGTGTAGCTTTTTTTTTTTTTTGTATTTCTTGTTTGTTTTACCCTACAGACTATTAGCT chr4 - 94230402 37883965 37883964 37884042 56346361 56346360 56346438 78 ACATAGAATTGACTGAAAATCTTCAGGTTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTCCCAACAGAAAAACAGCT ...........::xxx..:.x.x:..x..........x..xx.:..x:...........x...x.....xx.x:.... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 95440806 NA +3153 chr4 + 190214555 133366280 133366279 133366333 54 TTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGC chr4 - 94230402 5847642 5847641 5847695 88382708 88382707 88382761 54 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ....x.x...............:.::.........x.xx....:....:x.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 127518638 62695917 +3279 chr4 + 190214555 133413513 133413512 133413602 90 TGGCACCATCTTGGCTCACTGCAACCTCTGCTGCCCAGGTTCAAGCGATTCTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:...x..------..:..:..:xx:x:x:.::........:.x...x..x.x......:.::.:.........:.:....x.... 12M6D72M 58/84 69.0% 84/94230402 0.0% 6/84 7.1% 115216399 74998156 +3540 chr4 + 190214555 133496201 133496200 133496282 82 TGTGTGTGTGTATATATATATATGTATACATATATATATGTATACATATATATACATATATATATACATATATATACACATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .......:...:.::...x.:......x:.:....:....:x.....xx...:...:.:.:.:.:...x.:.:.x.::x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 125100412 65114143 +3882 chr4 + 190214555 133581495 133581494 133581741 247 TCATTAACAATTTAATTGC-------CTGAGTTTT-----CCTCTTTCTTTTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTG-----TATTTTAGGAGAGATG---GGGTTTCACCATGTTGGCCAGGA-----TGGTGTCTACTTCCT chr4 - 94230402 60352777 60352776 60353047 33877356 33877355 33877626 271 TCAGCAACAATTCAGCTGTGACAAATCTGAGTTCTGGAACACACTTTAAATTTCCTTTCTGGATTTTTTCCATTTCTCCCTCCTGCCTTTGCACTGTTTGTCTT-CTTCCTTGGTATTTTTGTTATTTATGTTGTTATCAATATTTCCTAATTCATTTTCTTCTGTTAGTTTCAATTGTTATTCCTTTTTTTTTTTTTTACTTCGCAACTCATTAAAGGCAAGATGTGCAGAGTAAGTCATGATTGTCAGGAATGTCAGGTTTATGCTTCCT ...x:.......:.::..:-------.......:.-----x.x....xxx...:::..::xxx..:....:x.:.:..::..:.x.:..:x:x..x.:.x....-...:...xx.x...:.x.:x.:.x.x..x:.x..xx.x....:.xx..:x.........x.:xx.:..xx.:x..x..::..............x:..:.-----:...xx...x:.....---:.:x.xx::....x.x.:.....-----x...x.x.:...... 19M7I9M5I64M1D100M5I16M3I23M5I15M 153/246 62.2% 271/94230402 0.0% 26/246 10.6% 73228718 NA +3064 chr4 + 190214555 133581525 133581524 133581594 70 TCTTTCTTTTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT ...:.:...:x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 87983812 NA +3019 chr4 + 190214555 133581529 133581528 133581593 65 TCTTTTTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45597713 45597712 45597777 48632626 48632625 48632690 65 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCT ...:......x....:::x...:...:.x...::.....:::::.x......:..::.x...... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 87983816 NA +3621 chr4 + 190214555 133581558 133581557 133581696 139 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--CTTTCTTCTTCTTTCTTTCTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTT---TCTTCTCTCTCTCTCTT------------------TCTTTTT-----------TTTTTTTTTTTTTTTTTTTTTTGTATTTTAGG chr4 - 94230402 45185583 45185582 45185754 49044649 49044648 49044820 172 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT--TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGG ..x..x..:x:....::....:..xx::.:--:.....x....x........--........-...:.:x.:..::..........---.....:..:....x...------------------.....:.-----------x.:.:..x..:....:.:...x:.x....... 30M2I20M2D8M1I23M3I17M18I7M11I32M 101/137 73.7% 172/94230402 0.0% 37/137 27.0% 88395975 NA +3254 chr4 + 190214555 133581598 133581597 133581676 79 CTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 47552649 47552648 47552727 46677676 46677675 46677754 79 CTTTCTTTCTGATGCACATTTCTATCTCTAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT ..........xx.x:x:x.:.:.x.:...xx:......:.x:xx:x.:x..........:................... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 86028949 NA +3279 chr4 + 190214555 133581604 133581603 133581725 122 TTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTAGGAGAGATGGGGTTTCACCATGTTGGCCAGG chr4 - 94230402 81713726 81713725 81713853 12516550 12516549 12516677 128 TTCCTTTATCCTTGGACATTTTCTTCTGAATTTGCAGGGCTTTTTTTCTCATCCAGCTTTGCTTTTCTCCTTTTTTTCTTTTATTTTTTGGGCCTGAAAAAGTAGAGATTTTCATCTTGCTGGCTAAG ...:.:.x..:..xxx:x...::....xxx...------.....:.....x::.xx::..x.....:.::.......:....x.......x:::.x.::.::x.x:.:x.....:.x..:....:.:. 33M6I89M 75/122 61.5% 128/94230402 0.0% 6/122 4.9% 51867878 NA +3155 chr4 + 190214555 133581610 133581609 133581688 79 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTC-TCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGT chr4 - 94230402 45030324 45030323 45030403 49200000 49199999 49200079 80 TTTTTCTCCTTTTTGGCTTCTCTCCTTATTCTGTTCCTCTATATAGCAACCTTTTTTTTTTTTTTTTTTCTTCTCCTTGT ...:.:..:..:..xx:....:..:..x..:.x...-...x.x.xx.xx:...................:..:.::.... 36M1I43M 56/79 70.9% 80/94230402 0.0% 1/79 1.3% 88551286 NA +3141 chr4 + 190214555 133581615 133581614 133581697 83 TTCTTTCTTTCTTTCTTTCTTTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT-------TGTATTTTAGGA chr4 - 94230402 40193303 40193302 40193392 54037011 54037010 54037100 90 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGAAAATGGACTTTAAGA ..x....x.::.....:...:.x.:..:.x...:::xx.::.:x.................:.....::.:-------..x.:....:.. 71M7I12M 57/83 68.7% 90/94230402 0.0% 7/83 8.4% 93388312 NA +3053 chr4 + 190214555 133581635 133581634 133581689 55 TTCTTTTCTTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTA chr4 - 94230402 50770959 50770958 50771013 43459390 43459389 43459444 55 TTCACTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTA ...x:.x...............:..xx.:.x.....x...x...........x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 82810676 NA +3178 chr4 + 190214555 133581643 133581642 133581698 56 TTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTAGGAG chr4 - 94230402 18929913 18929912 18929967 75300436 75300435 75300490 55 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATT-TATCTCAGAAG ..............:....................xx.:::x..-...:.:..:.. 44M1D11M 45/55 81.8% 55/94230402 0.0% 1/55 1.8% 114651730 75562825 +3357 chr4 + 190214555 133628656 133628655 133628708 53 TTGCTGTGCAGAAGCTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 24368487 24368486 24368539 69861864 69861863 69861916 53 TTACTATGTAGCAGTTCCCTTTCTTTCCTTTTTTTTTTTTTCTCCTTTTGAGA ..:..:..:..x..:..::.......:.....:........:.::........ 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 109260169 80954386 +3287 chr4 + 190214555 133695159 133695158 133695233 75 TTTTTAACAGAATTAAAAAAAAAACTATTCTAAAATTCACGTAGAACTAAAAAGGAGCCCAATTAGACACAGTAA chr4 - 94230402 85206863 85206862 85206937 9023466 9023465 9023540 75 TCTCTGACAGATTCTAAAGAAAAACTATGTTAAAACTTTTGAAGACTCAAAAAGGAGTTCAATGTGATGTAGTAA .:.:.:.....x.:x...:.........x:.....:.:x:.x...x::.........::....xx..:::..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 48488296 NA +3827 chr4 + 190214555 133709259 133709258 133709405 147 TTCCTTCCTTCTCCCTCCCTCCCTCCT--TTCCCTTCCCTTCTCTTCCCCTT--CTCCTTCCCCTTCCCCTTTCTTTCCTTCTCTTCTTCTCTCCTTCTTTCTCTCTTTCCCTATTTCCCTCTTTCCCTCTTTCTCTCTTTCCCTTTCTTT chr4 - 94230402 9693684 9693683 9693834 84536569 84536568 84536719 151 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..::.x......:xx..:..:.....:--.:..:.::x:..x....:.:...--x.x....xx..x.:xx...:x:.x.x.xx.......::::.:::..:.::.:....:::.:....:x:...:x:.x...:.:............::. 27M2I23M2I97M 88/147 59.9% 151/94230402 0.0% 4/147 2.7% 124015575 66198980 +3064 chr4 + 190214555 133709438 133709437 133709507 70 CTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTC chr4 - 94230402 90844561 90844560 90844630 3385773 3385772 3385842 70 CTCTCTTGCTTTCAGTTTCTTTCTCAGTGTTTTCTTTTCTTCCCTCTTTCTGTTTTGTCCACTCTATCTC ..:....x..:..xx.........:xx.x.:..::.......::.......x.:..x::.x....x.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 42864877 NA +3198 chr4 + 190214555 133709735 133709734 133709806 72 AAATTTTGTTACATATATACATATGTATATGTGTGTGTGTGTGTGTATACACACACATATATATATATATAC chr4 - 94230402 25393245 25393244 25393316 68837087 68837086 68837158 72 AAGTTCTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTAC ..:..:..x..x.x..:.::::....:.....:...:.x........:.........:::.:.::.x:x... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 108316490 81898065 +3015 chr4 + 190214555 133709762 133709761 133709828 67 TATGTGTGTGTGTGTGTGTATACACACACATATATATATATATACACTTATATATATATAGAAATAC chr4 - 94230402 47095159 47095158 47095225 47135178 47135177 47135244 67 TAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACAC ..x.x.....:........:........:.:..:..:...x.:xx.:.:..:.:...::.x.x.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 86614603 NA +3020 chr4 + 190214555 133720561 133720560 133720638 78 AGAAAAGAAAAGGAAAGGAAGGAAGCAAGGAAAGAGAGAAGGGAGGGAGGAAGGAAGGAAGTGGGGAGAGAAGAAGGG chr4 - 94230402 5927811 5927810 5927888 88302515 88302514 88302592 78 AGAAAAGAAGCACAGAAGAAGGATACAAAGAAAGAGAGCAGACAGGCACATGGCAATTCAGTGTGAAGAGCAGAGGGG .........:x:x.:.:......x:...:.........x..:x...x.x:x:.x..xxx....x.:....x...:... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 127792750 62421805 +3019 chr4 + 190214555 133750216 133750215 133750279 64 TATATAAATGTGTACTATATATATACATATATACACACACACACACATATATATATATCATTAT chr4 - 94230402 21908453 21908452 21908516 72321887 72321886 72321950 64 TATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACAGCACTAT .....x..x:....xxx:.x.....:..:..................:..xx.:.:.x..:... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 111841763 78372792 +3429 chr4 + 190214555 133766602 133766601 133766717 116 GATTTTAGAAAAAAAGAAAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGG--GAGGAAGAG--AGATAGAGAGGGAGAGTGGGA chr4 - 94230402 56708869 56708868 56708988 37521415 37521414 37521534 120 GACTTTGGGAAAAAAAAAAAAGGGGGGGGGGAAAAAAAGGAAATCAAGAAAATAACACATAGGAGGGAGAGGGGAAGTATAAAAGGACAAGAAAGAATCAGATAAATGCAGAAGATGAGA ..:...:.:......:......:::.:.::::...:..:..:.xx:......x:.x.x.x..:.:::...::.:...x.x:.....--:..:....:--.....:.x:x:..:::..:.. 86M2I9M2I21M 71/116 61.2% 120/94230402 0.0% 4/116 3.4% 77057733 NA +3058 chr4 + 190214555 133766613 133766612 133766677 65 AAAAGAAAAAGAAAGAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAAAAGAAAGAAA chr4 - 94230402 44400475 44400474 44400539 49829864 49829863 49829928 65 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAA ....:.x....x:x.x.x:x..::..::.:.:.:....:..:.......::.............. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 89366138 NA +3329 chr4 + 190214555 133766622 133766621 133766678 57 AGAAAGAGAAAGAAAGAAAGAGAGAGAGAAAAAGAAAGAAAGAAAAAAGAAAGAAAG chr4 - 94230402 22228922 22228921 22228978 72001425 72001424 72001481 57 AGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGGCAG ....:......:...:...........:.....:.x..::..x.:..:.:...:x.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 111537700 78676855 +3147 chr4 + 190214555 133766644 133766643 133766762 119 AGAGAGAAAAAGAAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGGGAGGAAGAGAGATAGAGAGGGAGAGTGGGAGGGAGGGAAAGAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAA chr4 - 94230402 54578648 54578647 54578764 39651639 39651638 39651755 117 AGGGATTAGAAGAAA-AAGGAGAAATCTATGGAAAACAGAAAAGG-GGAGGAGAGGAAGATAGGGACAGCTGGGGGGTGAAGCAGAGGTGAAGGGGCAGTGAAGTGAGAGCAAAACAAA ..:..xx.:......-..:..:...xxx.x.:..:.x.....:..-...:.....:x...x.....x..:x..:...x.:::x.....x:::::..x..x:.:.x:...:x:...x... 15M1D29M1D73M 74/117 63.2% 117/94230402 0.0% 2/117 1.7% 79187996 NA +3623 chr4 + 190214555 133766665 133766664 133766789 125 AAAAAGAAAGAAAGAAAGAAAGGGAGGAAGAGAGATAGAGAGGGAGAGTGGGAGGGAGGGAAAGAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAGAAAGAAAGT chr4 - 94230402 30533164 30533163 30533287 63697116 63697115 63697239 124 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATG-AGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGT ...x.:....:..........:.::..:.....:.x.xx.x.::.:...::::.xxx::..x.:..:xx.:..x::.:...x.-.:....:.....:.::.x:xx:.....:.:..:..x..... 83M1D41M 75/124 60.5% 124/94230402 0.0% 1/124 0.8% 103233501 86981054 +3089 chr4 + 190214555 133766720 133766719 133766789 70 GAGGGAAAGAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAGAAAGAAAGT chr4 - 94230402 73368869 73368868 73368938 20861465 20861464 20861534 70 GATAAAAATTAGAAGACAGGAAGGAGGGAAAAAGGGAGAGAAGGGAAAAAGATGACAAGAGGATGAAAGT ..x::...xx:....:x........:.....:.::..:....:....:..::x:.x..:..:.x...... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 60397851 NA +3193 chr4 + 190214555 133785661 133785660 133785742 82 GAGAGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAGAAAGAAAGAGAAA-----GAAAGAAAAAGAAAGAAA chr4 - 94230402 9237697 9237696 9237783 84992620 84992619 84992706 87 GGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAA .:..x.x..x:...:......:x.:x.::..:.....:.....:..:...:...:....:..:.-----.xx...x:::........ 64M5I18M 56/82 68.3% 87/94230402 0.0% 5/82 6.1% 124547964 65666591 +3471 chr4 + 190214555 133785729 133785728 133785864 136 GAAAAAGAAAGAAAGAAAGGGAAAGAAAGCAAGCTACAAGAAGAAAGGGAGGGAGG-----------------GAGGAAAGAAGAAAGGGAGGGAGGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAAGAAAAGAAAAGAAAGAA chr4 - 94230402 44400406 44400405 44400552 49829851 49829850 49829997 147 GAAAAAAGCCTACAGAAAATGGAAAAATGCAC----TGAAATGAAAGGGAGGATCGTTTTTGTGCCCAGCTCCAAAAAACAAAGTGTGTGTGTGAGGGAGG--GGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAA ......::xxx.x.....:x.:..:..x...x----::.:.x..........:xx.-----------------:.::..x:...x:x.x.x.x........--...:....::...:.......:...:...........x.::x.:...x.. 32M4D20M17I28M2D50M 88/130 67.7% 147/94230402 0.0% 23/130 17.7% 89385323 NA +3403 chr4 + 190214555 133785761 133785760 133785845 85 GCTACAAGAAGAAAGGGAGGGAGGGAGGAAAGAAGAAAGGGAGGGAGGG-AGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGA chr4 - 94230402 88922045 88922044 88922130 5308273 5308272 5308358 86 GCAACAAAGAGAAGTGGAAGGAGGGTGGAAAGAAGCGAGCCTGGATGGGCAGAGAGGCAGAAAAGGAAAAAGCACAGAAAGAAAAA ..x....::....:x...:......x.........x:..xxx..:x...-..::...x..::.......:.:x:x.:.......:. 49M1I36M 59/85 69.4% 86/94230402 0.0% 1/85 1.2% 44863716 NA +3337 chr4 + 190214555 133785793 133785792 133785898 106 AAGAAAGGGAGGGAGGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGCGAGAGAGAAAGA----------GAGAGAGAGTCTATA chr4 - 94230402 58035036 58035035 58035151 36195252 36195251 36195367 116 AAACAAAAGAGGGGGCAAGGGAAGCAAATGAGTAAATTTAAAACAAACAAAGGAAAAAAAGAAAAACAAGAAAGAAAATGCTATTGGAAGATGAAAAACACGAAGGAAAGTCAATA ..:x..::.....:.x:...:.:.x.::x:..x...xxx.:..x...x....:..:.........:x..........::.xx.xx.:....----------..::..:....x... 91M10I15M 70/106 66.0% 116/94230402 0.0% 10/106 9.4% 75750757 NA +3444 chr4 + 190214555 133785801 133785800 133785896 96 GAGGGAGGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAA-GAAAAGAAAAGAAAGAAAGAAAGCGAGA----------GAGAAAGAGAGAGAGAGTCTA chr4 - 94230402 44400495 44400494 44400599 49829804 49829803 49829908 105 GAGGGAGGGGGG--GGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAACTCCA .........:..--.....:...........::..............-.::x.:...x:.:xx.x.....::.::.----------:.:..xx.......:.x..:. 12M2D33M1I28M10I21M 69/94 73.4% 105/94230402 0.0% 13/94 13.8% 89385306 NA +3166 chr4 + 190214555 133785807 133785806 133785860 54 GGGAGGAAGGGAGGGAAGGAAAGAAAGAAAAAAGAAAGAAAGAAAAGAAAAGAA chr4 - 94230402 55458165 55458164 55458218 38772185 38772184 38772238 54 GGGAGGGAGGATGGGAAAAGAGGAGGGGAAAAAAAAAGACAGAGAAAAAAAGAA ......:...:x.....:::.:..::.:.....:.....x...:..:....... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 78327642 NA +5148 chr4 + 190214555 133789168 133789167 133789271 104 GGATTGTTCACCCATTAATAAG-AATTTGAGCTGTGATTAGGCAATGGTGATACAAGACAGTTTTGTCCTACTGATGATGTGTTTGTTGTTGCCATAGGAATCCT chr4 - 94230402 68039655 68039654 68039754 26190649 26190648 26190748 100 gGATTGTTCACCCACTAATAGGGAATGTGAGCTG-GGTTAGATCATCGTGAGACAGGTTAGTTTTACCCTACTGATGATG----TGTTGTTGCGCTAGTAATCCT ..............:.....:.-...x.......-.:....::x..x....x...:.x:......::.............----.........xx...x...... 22M1I11M1D45M4D21M 82/99 82.8% 100/94230402 0.0% 6/99 6.1% 65749513 NA +3026 chr4 + 190214555 133838007 133838006 133838059 53 CCCATTTTTAAGTTGGGTTCTTTCTTTGTTTTTGTTTTTTTTTTTTTTTTTTT chr4 - 94230402 7806544 7806543 7806596 86423807 86423806 86423859 53 CTCATTTTTAAGGTGGTTTGTTGTTTTTTTTTTGGTTTTTTTTTTTCCTTCTT .:..........x...x..x..x:...x......x...........::..:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 126031463 64183092 +3184 chr4 + 190214555 133838031 133838030 133838126 96 TTTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTGCTATAGAATTGTGTGAGTTATTTATGTAGTTTGGCTATTAATGTCTTATTAAATATATGGTT chr4 - 94230402 24375467 24375466 24375562 69854841 69854840 69854936 96 TCTGTACCTGTTTTTTTTTTTTTTTTTTCTGTTTCTACAGAAAGGTATAAGCTTTTACTATGCTAAGGTTGCTATGGCAATGTTGAACAGATGTTT .:...x::....................:.x..x...:....xx..:.:..:.x..xx.:.:x.xx..:.::..xx.:xx.:..:..:.x...x.. 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 109462564 80751991 +3251 chr4 + 190214555 133896953 133896952 133897031 79 AAACAAAATAAGAAATAGAAAGGAAAAAAGGGAAGAAAAGAAAAGGAGAGAAGAGAAAAAAAAAAAAAGGAAAGGAGAG chr4 - 94230402 10985341 10985340 10985419 83244984 83244983 83245062 79 AAATGAAATGGGGTATAGAAAACACGACAGGAGACAGAGAAAATGAAAAAAAAATAGGAAAAAAAAAAGGGAGGGAGGG ...::....::.:x.......:x.x:.x...::.x.:.::...x.:.:.:..:.x.::............:.:....:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 122911612 67302943 +3191 chr4 + 190214555 133898000 133897999 133898065 66 GTGCGTGTGTGTGTGTACACACGTGTGTGTGTGTACACGTGTGTGTGTGTGTGTACATACACTACA chr4 - 94230402 47095164 47095163 47095229 47135174 47135173 47135239 66 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACAGCA ...:.:................:.:::...:::..x..xx:.x::.....:..:.:......x:.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 86802836 NA +3102 chr4 + 190214555 133942889 133942888 133943002 114 CTTCCTTCTTTCCTTCCT-----TCCTTTCTTCCCTCCTTCCTTCCTTTCCCCCTCTCTCC---CTTCCTCCC---TCTCTCCCTCTCTCCCTCTCTCTCTCTTTCTCTCTTTCTTTCTTTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.....:...x.x.:.-----.x..x..:::...::.:.:..::....:.:.x.:....---:.:.x.::.---...xxx.:...x.::..:.........:.....x.xx...::.:..... 18M5I38M3I9M3I49M 74/114 64.9% 125/94230402 0.0% 11/114 9.6% 90860989 NA +3193 chr4 + 190214555 133942900 133942899 133942963 64 CCTTCCTTCCTTTCTTCCCTCCTTCCTTCCTTTCCCCCTCTCTCCCTTCCTCCCTCTCTCCCTC chr4 - 94230402 5437514 5437513 5437577 88792826 88792825 88792889 64 CTTTTCTTTTTTTCATGCCTATTAGCTTTCCTCCCCTCTCTCCTCCTTCCTCCCCCTCACCCCC .:..:...::....x.x...x:.xx...:.:.:...:.....::..........:...x...:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 128505386 61709169 +3707 chr4 + 190214555 134026324 134026323 134026384 61 CTCCTGGGTTCAAGTGATTCTCCTCCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.............x...x.xxxx........::.:.........:......x...... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 115829185 74385370 +3281 chr4 + 190214555 134054258 134054257 134054317 60 ATATATATATATATATATATATATATATATATAGTTATGCTAGTAGTTTTGATTGCAATT chr4 - 94230402 71873891 71873890 71873950 22356453 22356452 22356512 60 ACATGAATATATTCATACATATATATATATATGGATATTCTGGTAGTTTTAGGTGCACTT .:..:x......x:...:..............:.x...x..:........::x....x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 62180367 NA +3092 chr4 + 190214555 134061602 134061601 134061662 61 CACAAACACAAACATACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA-GAGATTG chr4 - 94230402 67652084 67652083 67652145 26578258 26578257 26578319 62 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGATTG ....x::...:.......:.xx:.:.:.:.:.:...................:.-x...... 54M1I7M 46/61 75.4% 62/94230402 0.0% 1/61 1.6% 66409518 NA +3082 chr4 + 190214555 134079581 134079580 134079630 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTGCATCTTTTAAAACT chr4 - 94230402 10363929 10363928 10363978 83866425 83866424 83866474 50 AAAAAGAAAAAAAAAAACAACAAACAAACAACTGTGCACTTTCTCAAACT .....:...........x..x...x...x.........::..:.x..... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 123715652 66498903 +3266 chr4 + 190214555 134079670 134079669 134079719 50 TCTGTGTGTGTGTGTGTCTGTGTGTGTGAGAGAGAGAGAGAGAGAAAGAG chr4 - 94230402 18982305 18982304 18982354 75248049 75248048 75248098 50 tctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x.x.x.x.......x...........................:::.. 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 115097365 75117190 +3339 chr4 + 190214555 134079670 134079669 134079717 48 TCTGTGTGTGTGTGTGTCTGTGTGTGTGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982307 18982306 18982354 75248049 75248048 75248096 48 tctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x.x.x.........x........x.................:... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 115097363 75117192 +3336 chr4 + 190214555 134084457 134084456 134084553 97 ATTTTGATGTTTTAAATTATGTAGCAAATTGATGGATTTTTTTTTAAAAAAAAGATTATTTAGAAAATACCAAATTATCTTAGAAGTGACATTATAT chr4 - 94230402 60163437 60163436 60163531 34066872 34066871 34066966 95 ATTTTTAAGCATTGCATAATTGGGCAAAACA--GAACTTTTTTTTAAAAAAAAGTTAATTTTGAAAGTGTGAAATAATTTACCAAGTGACAGTATAT .....x.x.:x..:x..x..xx:.....x::--.:.:.................x.x....x....:.::x....x..:.xxx........x..... 31M2D64M 67/95 70.5% 95/94230402 0.0% 2/95 2.1% 73921020 NA +3105 chr4 + 190214555 134086768 134086767 134086815 48 TTCTTTGTTTGTTTGTTTTTGTTTTATTTGTTTTTTTTTCTTTTATTA chr4 - 94230402 26096099 26096098 26096146 68134257 68134256 68134304 48 TTTCTTGTTTGTTTGTTTTTGTTGTTGTTGTTTTTTTTCCTTTTCCTA ..::...................x.xx...........:.....x:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 107990669 82223886 +3062 chr4 + 190214555 134098390 134098389 134098449 60 TAATCTGTTTCTTTTGTTTGTTTGTTTTTTTATTTTTTATTTTTATTGTTTTACTTTACC chr4 - 94230402 36038514 36038513 36038573 58191830 58191829 58191889 60 TAATCTGTTTATTTTGCTTGTTTGTTTTTTGCTCATTTATTTTGATTTAAATTCTTTATC ..........x.....:.............xx.:x........x...xxxx.x.....:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 98059876 92154679 +3184 chr4 + 190214555 134117005 134117004 134117066 62 TCTTTCTTTCTTCTTCTATTTTTCTGTCTCTTTTTTTCTTTTTTCTATCCTTTCTTTCTTCT chr4 - 94230402 8141256 8141255 8141317 86089086 86089085 86089147 62 TCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCT ...:........x...xx.::::......:.......:....::..::x....:.::..... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 125975749 64238806 +3209 chr4 + 190214555 134117019 134117018 134117090 72 TCTATTTTTCTGTCTCTTTTTTTCTTTTTTCTATCCTTTCTTTCTTCTATATTCTTTTCGTTCAGCAATAAC chr4 - 94230402 45600406 45600405 45600476 48629927 48629926 48629997 71 TCTGTCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTAT-TCTTTTACACTTTGTAGTAAC ...:.::x.........:...::............:..x::.....:...-.::...x.::.:x.:.:.... 50M1D21M 50/71 70.4% 71/94230402 0.0% 1/71 1.4% 88516613 NA +3156 chr4 + 190214555 134205636 134205635 134205679 44 AAAATGTGTGTGTGTGTGTGTGTGTATATATATGCATATATATA chr4 - 94230402 89821278 89821277 89821321 4409082 4409081 4409125 44 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .............x.x.................::....:..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 44384358 NA +3445 chr4 + 190214555 134205642 134205641 134205693 52 TGTGTGTGTGTGTGTGTGTATATATATGCATATATATATGTATATATACACA chr4 - 94230402 70982629 70982628 70982680 23247723 23247722 23247774 52 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ...........:........:....:.x....x..:.:...::...:..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 63223013 NA +3160 chr4 + 190214555 134223957 134223956 134224009 53 ATTGTCTAAGTTTCTAAATTAAAAAACAAACAAACAAACAA---CAACAACAAAAA chr4 - 94230402 71645052 71645051 71645107 22585296 22585295 22585351 56 ATTATCCAGCTACCAAGATTAAAAAACAAACAAACAAACAAAATCAACAACAAAAA ...:..:.:x.x:.x.:........................---............ 41M3I12M 45/53 84.9% 56/94230402 0.0% 3/53 5.7% 62578905 NA +3193 chr4 + 190214555 134223971 134223970 134224009 39 TAAATTAAAAAACAAACAAACAAACAACAACAACAAAAA chr4 - 94230402 35083938 35083937 35083976 59146427 59146426 59146465 39 TAAATACAAAAACAAACAAACAAACAACAACAACAAAAA .....xx................................ 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 99140033 91074522 +3144 chr4 + 190214555 134223978 134223977 134224012 35 AAAAACAAACAAACAAACAACAACAACAAAAAACC chr4 - 94230402 68691703 68691702 68691737 25538666 25538665 25538700 35 AAAAGCAAACAAACAAACAACAACAACAAAAAACC ....:.............................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 65532275 NA +3700 chr4 + 190214555 134253514 134253513 134253617 104 TTATTTATTTATTTTTAAAAATTTTACCTTTCATTTTATATACCAAAGGGTACTTGTACAGGTTTGTTATATGAGAATACTGCATCATGCTAATGTTTGGGATA chr4 - 94230402 68945622 68945621 68945725 25284678 25284677 25284781 104 TTATTTATTTATTTTTAACAATTTCAAGTTTCTTTATAGACATCAGAGAATTATTTTACAAGAATCTTTTAGAAGAGACAAGCATCATTCCAAAATCAGGGATA ..................x.....:.xx....x..x..x.:.:..:..::.xx..x....:.xx.x..x..x:...:xxxx.......x.:..x:.:x...... 104M 71/104 68.3% 104/94230402 0.0% 0/104 0.0% 65307892 NA +3272 chr4 + 190214555 134274135 134274134 134274231 97 TGATTTAA--TCATAGACACTGTCTGAAGTAG-TCATCCTCATCAGCTCCATTTTACAGATGTAAAAACTGAGTGTCAAAGAAATGAAGTTACTTACCCA chr4 - 94230402 10729158 10729157 10729257 83501146 83501145 83501245 100 TGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA .......:--...:.:xxx.:x.x...:....-.x..:x::..................:..x:.........xxx..x.x.::.x....x.:..:.... 8M2I22M1I67M 68/97 70.1% 100/94230402 0.0% 3/97 3.1% 123544977 66669578 +3154 chr4 + 190214555 134312035 134312034 134312174 140 ATGTGTATATATATATGTGGATGTGTATATATATACACACACACACGTATATGTATACATATATATATTCCATTAGTTCTGTCCCTCTAGAGAACGTTGACTAATACAATGATCTTTTCATGTCTAATTTCT--ATTCTGCA chr4 - 94230402 24136193 24136192 24136316 70094087 70094086 70094210 124 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACACCCTT------------------GACAGCTACTAACAAAGTGGTCTTGTAATACCAGAATCTGAAATTCTGCA .....:........x.:....xx...x......:.:.:...:...x::.x.::x.:...:....x..:x..x..------------------:..:x:x.....:.x.:..:....x.x..::.x:.x.::x--........ 74M18D40M2I8M 80/122 65.6% 124/94230402 0.0% 20/122 16.4% 110175842 80038713 +9745 chr4 + 190214555 134331565 134331564 134331892 328 CCTTTCATTTGTTTT-TACCTTCAAGCTAATAACTGAATTTATTC--TCCTTACTTTTTTTTCTTTGAAGATTAAAGGCATGCCTAGCTTTGTACTGCAGTTGCCTGGACAGTTGACAGCCTATTTAACTGAAGTCATACAAGCTGTACATTTTAA-CCCCTGGATTCCAAAGTGCAATCAAAATGACTTTTT---TATATGTAAGAGCAGTGCACTTCTGAAATATTTGTAGATGGATACATAACAGTTTC------------ATAAAACTCTCTTGGCCTTTTGCCTTTTAAAAAAACATTGAAGTCAACTAAGCTG--ATTAAAGAATTTTTAAGTTGGGAATTCT chr4 - 94230402 65785470 65785469 65785792 28444611 28444610 28444933 323 CTCCTCAGTTGTTTTGTACCTCCTAGCTAATAACTAAATATATTCACTTTTTTCGTTGTGTTCTTTGAAGATTAAAGACATGTCTGACTTTGTACTGGATCTGCCTGGACAGTTGACAGCCCATTAAACTAAAGTAGTACAAGACTTACATTTTAAGGTCCTGATTTCTGAAGCACACT-AAGATGACTTACTATGTATGTGCAAAA-----ATACTCATGAGACACTTTGAAAT-CATACATTTGAATTTCTTAGTGGAATGGATAAAATTC-----------TGCTTCTGTAAGAAAC--------TAGTTAAGCAGCAATTAAAATATCCTTCTGGTAAGGATCCT .:::...x.......-.....:.x...........:...x.....--.::..x.x..x.x.................:....:..::..........x.x:....................:...x....:....x:......x:x..........-x:....:x...::...::..x.-..:.......x:.---...:..:..:.-----::...:x...:.:.:..xx.:..-x......xxx.:....------------......:..-----------...:.:.xx..:....--------:.::.....x.--......:x..::..xx.x.::.:..:.. 15M1I29M2I109M1I22M1D13M3I11M5D23M1D16M12I9M11D16M8D11M2I28M 222/302 73.5% 323/94230402 0.0% 47/302 15.6% 68546095 NA +3071 chr4 + 190214555 134350822 134350821 134350871 50 CTACATCTTAAAAAGCAAACAAAACAAACAAACAATGAAAGAAAACAGAA chr4 - 94230402 81661600 81661599 81661649 12568754 12568753 12568803 50 CTTTATCCTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAA ..x:...:.x....:x...................xx...:......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 52689222 NA +3032 chr4 + 190214555 134354818 134354817 134354898 81 ATCCCCCTAACAAATGTGCACTCTTCTCTCTTGCTCTCTCTCTGTCTCCCTCCCTCTCTTTCTCCCTTTTTCTCCCCCCTC chr4 - 94230402 49394109 49394108 49394180 44836223 44836222 44836294 72 ATCTGCCTAAC---------CTCGTTTCTCCTCTCCCCGCTTTGTTTCCCCCTCTCTCTCTCTCCCTTCTCATCCTGTCTC ...:x......---------...x.:....:.x::.:.x..:...:....:.:......:........:.:x...:x:... 11M9D61M 51/72 70.8% 72/94230402 0.0% 9/72 12.5% 84960709 NA +3130 chr4 + 190214555 134360568 134360567 134360658 91 TGGAGTAGTTTAACCCTGTCTTTA----------CTATAGCTTGTACTC-----TACTGTTTTTTGTTTTTTGGTTTTTTGGTTTTTTTTTTTTTTTTGGTTAAGT chr4 - 94230402 48640781 48640780 48640885 45589518 45589517 45589622 105 TGGACTAGCTTA-TTCTGCTTTTAAAATTAGGTCTTATTTCTTATTCTCAGATTTGGTGGTTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTTCCTGTGGTAAGT ....x...:...-::...::....----------:...xx...:.x...-----.:x..x...................x.x............::.xx.x..... 12M1D11M10I15M5I52M 69/90 76.7% 105/94230402 0.0% 16/90 17.8% 85719787 NA +3176 chr4 + 190214555 134386017 134386016 134386099 83 ATCCCATGA-AGACACACACACATATAAACACACTATATATACACATATATATGTATATCTGTGTGTATGTATATATATGTATA chr4 - 94230402 33398768 33398767 33398851 60831552 60831551 60831635 84 ATCTTATGAGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACA ...::....-.:.:.:........:::x...x..:.....x.:::..x..x.x..:.::x.........::.:......::.:. 9M1I74M 55/83 66.3% 84/94230402 0.0% 1/83 1.2% 100987249 89227306 +3133 chr4 + 190214555 134387664 134387663 134387727 64 AAATTTATTATCATACATTTCTTCAGGTCAGAAATCTAAAA----TGAGTCTTCAAGGATATGCTTTA chr4 - 94230402 69842982 69842981 69843049 24387354 24387353 24387421 68 AAATTTGTTATCATACATTTCTGTAGGTCAGAACCCTAAAACATCTAATACTGGAAGAAAATGCTGTA ......:...............x:.........x:......----.:.xx..xx...:.x.....x.. 41M4I23M 51/64 79.7% 68/94230402 0.0% 4/64 6.2% 64544682 NA +3487 chr4 + 190214555 134420620 134420619 134420673 54 CATCACAATCTTTTATAAACATATATGTTTATATATGTGTGTGTATACACACAC chr4 - 94230402 208268 208267 208321 94022082 94022081 94022135 54 CACCACAACCCTTTATAAGCATATTTGTATACATATGTGTATACATACATACAC ..:.....:.:.......:.....x...x..:........:.::.....:.... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 134212352 56002203 +3238 chr4 + 190214555 134446165 134446164 134446256 92 AAGTACATTT---CTGTCTTTGTGCATACACATACACACACACAGGCACACATGTATGTATATATATATATATACATACATATATATGTGTGTGT chr4 - 94230402 17853451 17853450 17853545 76376858 76376857 76376952 95 AGGCACATTTTCTCTATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCAT .:.:......---..:...x.x.::..:......:::.:.....:.:.xx:x......:...:..:...x.x.:....::..x.x.x..:..::. 10M3I82M 60/92 65.2% 95/94230402 0.0% 3/92 3.3% 116592714 73621841 +3087 chr4 + 190214555 134446183 134446182 134446250 68 GTGCATACACATACACACACACAGGCACACATGTATGTATATATATATATATACATACATATATATGT chr4 - 94230402 71630138 71630137 71630205 22600198 22600197 22600265 68 GTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ......:..:...........x.x::...:..x.x.....::..:.:.x.::.::.:x....:.:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 62816045 NA +3545 chr4 + 190214555 134446187 134446186 134446262 76 ATACACATACACACACACAGGCACACATGTATGTATATATATATATATA-----------CATACATATATATGTGTGTGTTTATGT chr4 - 94230402 61485373 61485372 61485459 32744944 32744943 32745030 87 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACATTGTTGT ...:.......:.......x......x...:.....:...:...x....-----------:...x...x...x....:::..xx... 49M11I27M 59/76 77.6% 87/94230402 0.0% 11/76 14.5% 72960814 NA +3162 chr4 + 190214555 134472398 134472397 134472566 169 AAAGAGGAAAGAAAGAAAGGGAAGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGAAGACAGAAAGAAAGAAAGAGAGAGAA-GGAAGGAAGGAAGGGAAAGAGAAAGAGAGA-------------------------------GAAGGACGGAAGGGAAAGAAGAAAGAAAGAAAGA-----AAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 72821491 72821490 72821691 21408712 21408711 21408912 201 AAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAAT-----CAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAGTTCTTTTCATGATTTTGATATTGCTGCTCTTGGAGTTAGTAAGAGAAAGGCACTTGAAAGAAAGATTTGTGACAAAGGAAAATATGTAGAAAGAA ..:.:.............:.:.....x::xxx:x...:....:..::....x-----...xxx........:...x.:..-:...:...xx.:x::....::...x.:.::-------------------------------.:..xxx.x...:.....:x:xxx..........-----:.x....:..:.x.x:x........ 52M5D23M1I30M31I34M5I25M 107/164 65.2% 201/94230402 0.0% 42/164 25.6% 61650907 NA +3177 chr4 + 190214555 134472535 134472534 134472618 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x...::x......::..:... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 97614241 92600314 +3210 chr4 + 190214555 134472557 134472556 134472638 82 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAG---AAAGAAA chr4 - 94230402 32280615 32280614 32280699 61949704 61949703 61949788 85 AAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATAGCAGTAGAGTTCAAAGAAA ...:...:...............::...x.xx::.:.:.:x.....x::..x.x.....:..x.x..x..x.:..---....... 75M3I7M 58/82 70.7% 85/94230402 0.0% 3/82 3.7% 102191942 88022613 +3625 chr4 + 190214555 134472572 134472571 134472659 88 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAAAGAGAAAGAGAGAGAG chr4 - 94230402 25361664 25361663 25361751 68868652 68868651 68868739 88 GGAAGAAAGTAAGAAGGGACTGAAAAGTGGAGAAGGAAAGAAAGAGGGAAAAATCCTAACTTTGAAAAAACAACAGAGGGAGAGAGGG .:.......x.....:.:.xx:..:.:x......:..........:.....:.xxxx..xxxx....:..x..x...::.......:. 88M 61/88 69.3% 88/94230402 0.0% 0/88 0.0% 109110908 81103647 +3503 chr4 + 190214555 134473119 134473118 134473184 66 CTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGAATTATAAGCATGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::..........x...x.xx.x........:..x...........:..:.--.:........ 54M2D10M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 116275980 73938575 +3104 chr4 + 190214555 134556409 134556408 134556488 80 AGAAAGAAAAGAAGGAAGGGAGGGAAAGAAAGAGAAAAAAGAAAAAAGAAGGAGCTCTTTCTTTCAGCACTGGGAAAAAA chr4 - 94230402 9237704 9237703 9237782 84992621 84992620 84992699 79 AGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAG-ATGGGGAAAGAA ..x::..:.::....x..x.:.:.:.....:..:.....:.......:..:.:.xxx...x.x....-.:x......:.. 67M1D12M 54/79 68.4% 79/94230402 0.0% 1/79 1.3% 125318705 64895850 +3295 chr4 + 190214555 134567832 134567831 134567993 162 TTTATATATATAAAATTTTATATATATAATATATATAACA------TATATTATATATTATATAATATATTATATATAATATATAATATATGTTATATATA----TTATATATATTATATATTATATATTATATATATTATATATTATATATTATATATATTATATATTATA chr4 - 94230402 48211384 48211383 48211550 46018853 46018852 46019019 167 TTTATTTAAATAAAACCTTGAATAAAGCTTATTCAAGGAAGCTTAATTTACTATTCATTTTG--ATAGGTTTGGACTAACCTTTATCATAT-CTATACATACGACTAATATATTCTATGTACTGTATATTATCTTT--TATATATTATATGCCATATTTATCATATATCACA .....x..x......::..:x...x.xxx...x:.x::x.------.x..:...x:...x.:--...x:..xx:xx...:x.x..x:....-:....:...----.x......x:...:..:.:........x.x.--............:::....x...:......:.:. 40M6I16M2D27M1D9M4I31M2D34M 106/157 67.5% 167/94230402 0.0% 15/157 9.6% 86356448 NA +3773 chr4 + 190214555 134567874 134567873 134568022 149 TATTATATATTATATAATATATTATATATAATATATAATATATGTTATATATATTATATATATTATATATTATATATTATATATATTATATATTATATA---TTATATATATTATATATTATATATTTATATATATATATATATAATTTTTT chr4 - 94230402 67910059 67910058 67910202 26320201 26320200 26320344 144 TATTACATAT---ACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATA---TACATGTGAGATAAATTTAAGCTGATTAAATATCA-ACATTTGAATACATATA-AGAAAATATTTT .....:....---.:....:xxx.x.....x...xx:...:..:x..x.......:......x.......x....:.x:....---..:..:.x.x...---...x::xx....x....:.-.:....:x...:.....-.x.x...x.... 10M3D70M3D13M3I19M1D17M1D12M 102/141 72.3% 144/94230402 0.0% 11/141 7.8% 66657815 NA +3479 chr4 + 190214555 134567909 134567908 134568019 111 TAATATATGTTATATATAT-TATATATATTATATATTATATATTATATATATTATATATTATATATTATATATATTATATATTATATATTTATATATATA-TATATATAATTT chr4 - 94230402 48211458 48211457 48211570 46018833 46018832 46018945 113 TAACCTTTATCATATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCT ...:x.x.:.:....x...-:...::xx.x.......x...:.xx.:........x.x.............::xx...x...:......:xxx::.....-:.....::..:. 19M1I80M1I12M 76/111 68.5% 113/94230402 0.0% 2/111 1.8% 86356451 NA +3016 chr4 + 190214555 134579930 134579929 134579974 45 GGACCTAACTGTTTTTTTTCTTTTTCCTTTTTTTTTTTTTTTTTT chr4 - 94230402 42598240 42598239 42598284 51632119 51632118 51632163 45 GGACTTGAATGTTTTTCTGCCTTTCCCTTTCTTTTTTTTTTTTTT ....:.:.x.......:.x.:...:.....:.............. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 91981690 NA +3276 chr4 + 190214555 134588305 134588304 134588382 78 ATCACATATATATGTGTGTGTGTGCGTATGTGTGTGTGTGCATATATATATATATATCCTTTTTTCTTTAGTTTTTCT chr4 - 94230402 42192961 42192960 42193038 52037365 52037364 52037442 78 ATTACATATATGTGTGTGTGTGTGTATACGTTAGATGATGCTTTTATAGAAAGATAACCTCCTTTATATAGTTTCTTT ..:........:............::..:..xx.xxx:...x.x....x.x.x...x...::...x.x......:.:. 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 92395344 NA +3168 chr4 + 190214555 134589259 134589258 134589346 88 AGTATTCTCTCCAT-ATATATATATATACATACACACACACATATATACATATATACATATACATATATGTATATATATATACACATAT chr4 - 94230402 71630117 71630116 71630205 22600198 22600197 22600286 89 AGGATTTTCACTATCACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..x...:..x.:..-.:x..::.::..:....:.........x..........x.x::...:...:.:.x.::..:.:x...::::.:. 14M1I74M 57/88 64.8% 89/94230402 0.0% 1/88 1.1% 62959142 NA +3192 chr4 + 190214555 134589274 134589273 134589344 71 TATATATATATACATACACACACACATATATACATATATACATATACATATATGTATATATATATACACAT chr4 - 94230402 50941868 50941867 50941935 43288468 43288467 43288535 68 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATAT---TTTGAATACATACGTAT ..x..x.x....:..:....x..........:...x.......:..:....---.x.:x...:....::.. 51M3D17M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% 83647406 NA +3138 chr4 + 190214555 134590997 134590996 134591052 56 ATATATACACATATATATGTATATGTGTGTGTATATATATGTGTGTGTATATACAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x.:.........:......:.x.......:.x:..........:.:.:x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 114886723 75327832 +8203 chr4 + 190214555 134620029 134620028 134620275 247 ATAGCCAGGTTGAGTCAAAAGAGCAAAAGTAAAATTGTGAATAAATATAGCAACTGTATTTTCCAAATTGTACCTGGCAGAAAAACTGAGAAATCCACATCTGTTGCTGGGAATTAATATTACCTTATCACAGAAGAAA--CATCTTAGGTTATTTGTTATAGCTGCCATGAAATAAAATATCAAAGTGAAACAGAAATCTAATGTTATATTTTGAACCCTCTGAGAATACACTTCAAGTGGCTGCAGG chr4 - 94230402 65645180 65645179 65645421 28584982 28584981 28585223 242 ATACCAAAGATGATTCAGAA----AACAGAAAAATTCTGAAAAGCTAATGAAA--GTGTCATCTAAATCATACCTGGCAAGAGTAGTATTAAAAACACATCTGTTTTGGGGAATTGG-ATCTCCTCTTTGAAGAGGAAAGCTACCTTTGGTTATTTGTTGTGGCTGTCATGAAATGAAACATGAAAGTAAAACTGAAATTCACTGTCATATTCCAGATCCCAAGAGACTACCCTCAAAGTGCCTCCTGG ...x.x.:.x...x...:..----..x..x......x....x.:x..xx.x..--..:.:x..:....::.........::.:x.x.:xx...xx..........x:x.......::-..:x...:x.::x...:....--:.:...x...........:.:....:........:...:..x.....:....x.....::.x...:.....::::.:..:xx....x...x..:x.....x..x.x.. 20M4D29M2D62M1D21M2I108M 166/240 69.2% 242/94230402 0.0% 9/240 3.8% 68974849 NA +3457 chr4 + 190214555 134630350 134630349 134630423 74 CTGCAACCTCCGCCTCCCGGGTTCAAGGGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:.........x.x...x.xx.x........::::.........:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 116433224 73781331 +3775 chr4 + 190214555 134641107 134641106 134641234 128 TCTCATATACACATATATAAA-ATGTATATATATGTAATGTGTATATA------TGCATATATATACATACA---------------------------TATGTGTGTGTGTGTG-----------------------------------TATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAT chr4 - 94230402 89611846 89611845 89612042 4618361 4618360 4618557 197 TTTtatatacatacatatatatatatgtatatatgtattgtatatgtaatctaacacatatatatatatataATAGAATACGAAGCATAGATAAATCCTTATCTATCTCCGTATTATTAGTACAACATATAATATATAATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGAT .:.:.......:.:.....x.-..:.:..........x...:...:..------::..........:...:.---------------------------...x.:.x.x:..:.x-----------------------------------......x.x......::....:x..............::........ 21M1I26M6I18M27I16M35I47M 99/128 77.3% 197/94230402 0.0% 69/128 53.9% 45029261 NA +4436 chr4 + 190214555 134641122 134641121 134641227 106 TATAAAATGTATATATATGTAATGTGTATATATGCATATATATACATACATATGTGTGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398772 33398771 33398873 60831530 60831529 60831631 102 TATGAGAAATATACACAC---ATGCGCACAGAC-CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:.:.x:....:.:.:---...:.:.:.x.:-......x..::..x:.x.x.....:...........:.:.......:.:.x...........x.....x... 18M3D12M1D72M 75/102 73.5% 102/94230402 0.0% 4/102 3.9% 101242350 88972205 +4322 chr4 + 190214555 134641135 134641134 134641229 95 TATATGTAATGTGTATATATGCATATATATACATACATATGT--------GTGTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398772 33398771 33398873 60831530 60831529 60831631 102 TATGAGAAATATACACACATGCGCACAGAC-CATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:x.x...:.::.:.:....::.:.x.:-....:.x....--------.....:......:....:.:.......:.:.............x.....x... 30M1D11M8I53M 71/94 75.5% 102/94230402 0.0% 9/94 9.6% 101242363 88972192 +4091 chr4 + 190214555 134641149 134641148 134641243 95 ATATATGCATATATATACATAC---ATATGTGT--------GTGTGTGTGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGATTTATTGCAA chr4 - 94230402 33398780 33398779 33398885 60831518 60831517 60831623 106 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaa .....::..:..::::...x..---...x:...--------.....:....:.:....:.:.......:.x.............x.....x...x..x...x.x.. 22M3I8M8I65M 72/95 75.8% 106/94230402 0.0% 11/95 11.6% 101242369 88972186 +3254 chr4 + 190214555 134641186 134641185 134641246 61 TGTATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAT--TTATTGCAAGTA chr4 - 94230402 12340920 12340919 12340982 81889421 81889420 81889483 63 TGTACATACATAAAAATATATGGAGAGAAAGAGAGCAAAAGAGAGGGATGATTAATATAAGTA ....:...:...x.x......:......:......x:.:......:...--...x.::..... 49M2I12M 48/61 78.7% 63/94230402 0.0% 2/61 3.3% 122300266 67914289 +3277 chr4 + 190214555 134642267 134642266 134642385 119 TGTGTGTATATATACACACACACACACACACACACATATATACATATACATA----------TATATACATATACATATATATAT----------ACACACATATA--------------TATATCTCACAAATGCTTTATCCACTCACTGAT chr4 - 94230402 73121102 73121101 73121254 21109149 21109148 21109301 153 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGATACGCTCAGCCCATACACCGAT ....::.::....x..:.....:.:.....x.x:...:x:......:::...----------.....:::x:........x...:----------........:..--------------...x.:...x.x.:...:x::...:x...:... 52M10I23M10I11M14I33M 82/119 68.9% 153/94230402 0.0% 34/119 28.6% 61521165 NA +3070 chr4 + 190214555 134642273 134642272 134642335 63 TATATATACACACACACACACACACACACATATATACATATACATATATATACA--TATACATAT chr4 - 94230402 66904848 66904847 66904912 27325491 27325490 27325555 65 TATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .....:...::.........:.........:....x:.x:.x..x:.:......--:....::.. 54M2I9M 47/63 74.6% 65/94230402 0.0% 2/63 3.2% 67737425 NA +3013 chr4 + 190214555 134642274 134642273 134642357 84 ATATATACACACACACACACACACACACATATATACATATACATATATATACATATACATATATATATACACACATATATATAT chr4 - 94230402 4417349 4417348 4417432 89812971 89812970 89813054 84 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTAT .:.....:.............x:x...:.:::..:x:x:.x:::.:..:..:xx.x:...x..x.........:..x...x... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 130224925 59989630 +3823 chr4 + 190214555 134642274 134642273 134642369 96 ATATATACACACACACACACACACACACATATATACATATACATATATATACATATACATATATATATACACACATATATATATCTCACAAATGCT chr4 - 94230402 4417351 4417350 4417446 89812957 89812956 89813052 96 ATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACT ...................x:x...:..::..:x:x:.x.:..:..:...xx.x::.:x..x.....:...:.:x...x.....x:......::.. 96M 64/96 66.7% 96/94230402 0.0% 0/96 0.0% 130224923 59989632 +3285 chr4 + 190214555 134642294 134642293 134642380 87 ACACACACATATATACATATACATATATATACATATACATATATATATACACACATATATATATCTCACAAATGCTTTATCCACTCA chr4 - 94230402 17520749 17520748 17520832 76709571 76709570 76709654 84 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCCCAC---TGGTCTATTCCATCA ...x.:.:...x.:...x.....:...:..:::x..:.x.:....x.:...::..........:.:...---..x.:...:.xx... 69M3D15M 58/84 69.0% 84/94230402 0.0% 3/84 3.6% 117121545 73093010 +3206 chr4 + 190214555 134644485 134644484 134644547 63 ATATGTATATATACACATATACACATATATACATATACGTATATATACACATACACACATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x:......x.....x.........:..:::x..:.x.:....x......:..:.:..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 117123736 73090819 +3076 chr4 + 190214555 134644984 134644983 134645039 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86477934 NA +3076 chr4 + 190214555 134645008 134645007 134645063 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86477958 NA +3076 chr4 + 190214555 134645032 134645031 134645087 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86477982 NA +3076 chr4 + 190214555 134645056 134645055 134645111 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86478006 NA +3076 chr4 + 190214555 134645080 134645079 134645135 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86478030 NA +3076 chr4 + 190214555 134645104 134645103 134645159 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86478054 NA +3076 chr4 + 190214555 134645128 134645127 134645183 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86478078 NA +3076 chr4 + 190214555 134645152 134645151 134645207 56 CATGTATGTATATACACACACATACATGTATGTATATACACACACATACATGTATG chr4 - 94230402 48167050 48167049 48167105 46063298 46063297 46063353 56 CATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..........x...:....:x.::.:..:x:.......:::.:......... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 86478102 NA +3148 chr4 + 190214555 134645176 134645175 134645259 84 CATGTATGTATATACACACACATACATGTATGTATATACACACATACATGTATATACACACACATATGTATATACACACATATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .....:.....:.:::..:.x.:.::.:.x.::....::.::.x.....xx...:.........:.:::.x.:...x.::x... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 126249389 63965166 +3402 chr4 + 190214555 134645224 134645223 134645291 68 TGTATATACACACACATATGTATATACACACATATACATATATGTATATACACACATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ........:xxx..:...........x...:.:..:x.:..:..:x:.......::..:....:.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 86478186 NA +3508 chr4 + 190214555 134645258 134645257 134645390 133 TACATATATGTATATACACAC-----ATATACATATATGTATATACACACATATGTATATACACATATATACATATATGTATATACACACATATGTATATACACATATATGTATATA---CACATACATATATGTATATAC chr4 - 94230402 4417317 4417316 4417457 89812946 89812945 89813086 141 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC .....::x...x:...x.x..-----..x..x.:....:..:.:.......:.x.x.:....:...:x:x::x.::.::.:...xx.x:...x.:x............x.:.x....---....x...:xx.::....x.. 21M5I91M3I21M 86/133 64.7% 141/94230402 0.0% 8/133 6.0% 130227941 59986614 +3109 chr4 + 190214555 134645266 134645265 134645331 66 TGTATATACACACATATACATATATGTATATACAC--ACATATGTATATACACATATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ........:xxx......::.....:x.:.....:--....:..:x:........:..:....:.... 35M2I31M 49/66 74.2% 68/94230402 0.0% 2/66 3.0% 86478228 NA +3055 chr4 + 190214555 134645280 134645279 134645341 62 TATACATATATGTATATACACACATATGTATATACACATATATACATATATGTATATACACA chr4 - 94230402 47095165 47095164 47095226 47135177 47135176 47135238 62 TGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .:.:.:.:.:...:..:.....:.:.....:...x..xx..x:.::.:....:......... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 87550115 NA +3475 chr4 + 190214555 134645284 134645283 134645350 67 CATATATGTATATACACACATATGTATATACACATATATACATATATGTATATACACACATATGTAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..........::........:..::.:.:........x..x:.x:.x..:......xx....:.:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 67740438 NA +3212 chr4 + 190214555 134645433 134645432 134645488 56 TGTGTATATATACATAAATGTGTATATATATGTATATATACATATATAAATATATA chr4 - 94230402 32959568 32959567 32959623 61270780 61270779 61270835 56 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATA ......:x.......:.:...x.:.:..::..::..............x.x..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 101685865 88528690 +3357 chr4 + 190214555 134727739 134727738 134727791 53 TTCCTAATGGCTTGAGGTAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAAG chr4 - 94230402 86606841 86606840 86606893 7623510 7623509 7623562 53 TTCCTAATGGCTTGAATTGAAAAAAAAAAAAAAAAAAAGGGGGGGGGGAAAGG ...............:x.:...................::::.::.::...:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 48120898 NA +3535 chr4 + 190214555 134799840 134799839 134799922 83 AAGACTGGGCGACAAAGCGAGATCCTATTTCAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAA chr4 - 94230402 94076856 94076855 94076934 153469 153468 153547 79 AAGGCTGGTCAAAAAAAAAAAATA--ATTT--ACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAA ...:....x.:.x...:x:.:..x--....--...:.:.......x..x..x.........:.:.:.............x... 24M2D4M2D51M 61/79 77.2% 79/94230402 0.0% 4/79 5.1% 40722984 NA +3219 chr4 + 190214555 134799851 134799850 134799936 86 ACAAAGCGAGATCCTATTTCAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAAAATGGAAAAATTT chr4 - 94230402 64904259 64904258 64904344 29326059 29326058 29326144 86 ATATAGGGTGATCTTGCTTTGGTAATATTGACAGCAAGAAAAAAAAATAAAAAAAAGAGAGAGACAAATAGTAAACAAGGGAAGTT .:.x..x.x....:.::..::::..:.x::...:x..:.........x................x.:.x.:x...::::::..x.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 69895592 NA +3438 chr4 + 190214555 134799870 134799869 134799924 55 CAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAAA chr4 - 94230402 12139749 12139748 12139803 82090600 82090599 82090654 55 CAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAAA ........:......x......:.::.....x.:..:..:.:...::........ 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 122660121 67554434 +3045 chr4 + 190214555 134799878 134799877 134799923 46 ACAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAA chr4 - 94230402 48383075 48383074 48383120 45847283 45847282 45847328 46 ACATCCATGGGAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAA ...x.x.x:::..............................x.... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 86416803 NA +3454 chr4 + 190214555 134800564 134800563 134800629 66 GAGACTACAGAGTTAAAAGGAAAAGAGAAAGAATGAAAGGAAAACATGAGGGGAGAGAGAGAGAGA chr4 - 94230402 32837983 32837982 32838048 61392355 61392354 61392420 66 GAGACTGTAAAGTCAACTGGGAAATGGGAATAAAGGAAGGAAAAGGTGGGGAGAGAGAAAGAGAGA ......::.:...:..xx..:...x:.:..x..x.:........x:..:..:......:....... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 101962581 88251974 +4100 chr4 + 190214555 134801555 134801554 134801732 178 AGAGGAGACCAAGTCCCTGTATATATATATATATATAATATATATATAATATATATATA-----------------------ATATATATATATA-ATATATATAATATATATATAATATATATAATATATATAATATATATATAATATATATATGTATATGTATACATACATACACACACATACACACACACACACACACA chr4 - 94230402 80747663 80747662 80747859 13482544 13482543 13482740 197 agtgcaaattaaggctatatatacatatatatacata-tatGCACACAA-ATATACACACTCACAGATAGGGgtgtgtgtgtgtgtatgtgtgtgtgtATATATATTGCACATTTAAAGCCCCTTGAACAGATAAC---TGTACTGCAAGCATGTGTATAGCTATGCATACATACGCAACTATACATACATACACACACATA ..x.x.:.::...x.:x.:....:.........:...-...::.:.:..-.....:.:.-----------------------:.:...:.:.:.:-:........x.::.:..x...x::x:x.x:x.:.x....:---.:..:x::.x::..:......xx...:.........:..xx:.....:...:.........:. 37M1D11M1D9M23I13M1I40M3D63M 113/173 65.3% 197/94230402 0.0% 29/173 16.8% 54053892 NA +3170 chr4 + 190214555 134801665 134801664 134801740 76 ATATATATATAATATATATATGTATATGTATACATACATACACACACATACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATG-TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:-.:.::...x::..:.:.x......::..::.x:....xx.:.................x..... 11M1D64M 52/75 69.3% 75/94230402 0.0% 1/75 1.3% 126405877 63808678 +3286 chr4 + 190214555 134801676 134801675 134801744 69 ATATATATATGTATATGTATACATACATACACACACATACACACACACACACACACACACACACATAGT chr4 - 94230402 14964819 14964818 14964887 79265516 79265515 79265584 69 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT .:.:.x......x.::..:.:..:..:.::.:::.:.....xx........::............:x.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 119836857 70377698 +3019 chr4 + 190214555 134810305 134810304 134810378 74 AAGTGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATTTGTTTTTTTTTTTTT chr4 - 94230402 57691395 57691394 57691468 36538935 36538934 36539008 74 AAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT .....:x::::..:x.......:..:x.........:::.x....:x...x.....x..x:...x:x....... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 77118910 NA +3102 chr4 + 190214555 134810309 134810308 134810378 70 GTCCGTGTGTGTGTGTGTG---TGTGTGTGTGTGTGTGTGTATATATATATATATATTTGTTTTTTTTTTTTT chr4 - 94230402 15882752 15882751 15882823 78347580 78347579 78347651 72 GTCAGTGTGTG-GTAGCTGCATTGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTT ...x.......-..:xx..---..x..............:.......:..xx.:.:..x........:..x.. 11M1D7M3I51M 55/69 79.7% 72/94230402 0.0% 4/69 5.8% 118927557 71286998 +3082 chr4 + 190214555 134810330 134810329 134810379 50 TGTGTGTGTGTGTGTGTATATATATATATATATTTGTTTTTTTTTTTTTC chr4 - 94230402 19559296 19559295 19559345 74671058 74671057 74671107 50 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTC ...............:..............:.x:.:x.....x.x.x... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 115251034 74963521 +3145 chr4 + 190214555 134835809 134835808 134835886 78 AAACAAAACAAAAAACAAACAACAAAAAAAGCTTTTTAGTTTAATATAGTCTCTTTTGTCTATTTTTGCTTTTGTTAT chr4 - 94230402 51159976 51159975 51160053 43070350 43070349 43070427 78 aAAAAAAACAACAAACAAACAACAAAAAAACCCCTATACTTCTATTTCTTAATTTGACTCTATTTTTTTTTCTATTAT ...x.......x..................x.::.x..x..:x..x.xx.xx:..xxx.........x:..:.:.... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 83675833 NA +3119 chr4 + 190214555 134875289 134875288 134875349 61 ATCAAATTAAAGATATGTCATATATATGTGTGTATATATATATATA-----TTATAATTACATAAA chr4 - 94230402 85036762 85036761 85036827 9193576 9193575 9193641 66 ATTAAATCAGGTTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTAAGCACAGAAA ..:....:.::xx...:......:.:....................-----..:...x:...x... 46M5I15M 48/61 78.7% 66/94230402 0.0% 5/61 8.2% 49838527 NA +3102 chr4 + 190214555 134883040 134883039 134883098 59 AAAGACTATATTGCATGGTTAAATTCCCAGGACTTAAGTTGTTTTTGTTTTTGTTTTTT chr4 - 94230402 34172914 34172913 34172972 60057431 60057430 60057489 59 AAAACTCATATTCAGTAATTGAATTCCCTGGGCTAGAGTTGGTTTTGTTTTTGTTTTTT ...:x::.....xx:.::..:.......x..:..x:.....x................. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 100710126 89504429 +3464 chr4 + 190214555 134945545 134945544 134945626 82 AAAATCAATTAAAG--CAAAAATAGAAAATCAATAAAGAAAATCTACAAAATAAAAATTGTTTTTTTTTTTTTTTGAAAAAAAA chr4 - 94230402 33261182 33261181 33261265 60969138 60969137 60969221 84 AAGGTAGATTGAAGATTAAAAACAGAAAGGGAGTGAAAAAAAAGGACAAAAAAAAAAGCCTTTTTTTTTTTTTTTTAAAGAAAA ..::.x:...:...--:.....:.....:xx.:.:..:....xxx......x.....x:x...............x...:.... 14M2I68M 60/82 73.2% 84/94230402 0.0% 2/82 2.4% 101684363 88530192 +3244 chr4 + 190214555 134991102 134991101 134991142 41 GAAAAAAAAAAAACAAAAGCAAAAATAAACAAACAAAAAAA chr4 - 94230402 4159749 4159748 4159789 90070614 90070613 90070654 41 GAAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAAA ......x.......x...:...................... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 130831353 59383202 +3301 chr4 + 190214555 135002999 135002998 135003128 130 CAGAAAATATTTATTGTGATTACCTAT-----ACACAGAAAAGGTACATGTCAATACATATTATCCAAATTAGAAGGAGCAGTAGACATTAAGAAAATCAGTAATATTGTAAATAAGAGACTGTGAGA-AATTCTC chr4 - 94230402 87583741 87583740 87583865 6646538 6646537 6646662 125 CAGTGAATATTCACTG--ACTAACTATGGCCAACTCAAAAGTAGTTGATGGTAATGAA---------AATGAGAAGGAGCTGTTTACACTGAGTAAATCTGTACTACTGTAAATAAAAGGGCGTCAGATAATACTC ...x:......:.:..--.:..x....-----..x..:..:x:..xx...x:...:x.---------...x.........x..xx...:.:..x.....x...x..:.........:..:x:..x...-...x... 16M2D9M5I26M9D61M1I7M 86/119 72.3% 125/94230402 0.0% 17/119 14.3% 47419258 NA +4571 chr4 + 190214555 135007702 135007701 135007957 256 ACTCTCTCTCTCT-ATATATATAC-ACATACATATACATATATATACACATATATATACAC-----ACATATATTTTATATATATTATATATTATATATAATATATTTTATATATCATATATTTTATATATTATATATATTATATATATATATTATATATATTATATATTATATATAT-TATATATATTATATATAT-----TATATATTATATATATTATATATATATTATATATATTATATATTAT-ATATATTATATATATATTATA chr4 - 94230402 62847166 62847165 62847424 31382979 31382978 31383237 259 ATTCTCCCTGTATGATATTTGTATTACATAACGAAATAAGTATATATAAATATG-ATACAAGGAGAACATTCATTTT--------TGTATATTATACATAAAATCTTTCATATTTATGATTTTTCTGTTGATTTATATATTATATACAGAGATTATATA-AGAATATATTATAGAGAGATATATGTAGAATTTAAGTAGAGAAATACATGACATCTATTCTCTATATGACA-ATGTATTGTGGTTGACAACCCATTATATACCTAGTATA .:....:..x.x.-....x.:..:-.....xxx.x.:.x:......:.x....:-.....x-----....x:.....--------.:.........:....x..x...:....x.xxx..x...:xxx.:x.x.............:.x.x........-.xx..........x.x.x-.....:..xx..x..x:.-----x...:..x.:..x....x.x.....:x:.-..:....:.:xx.x.:-.:x:........:x..x.... 13M1I10M1I29M1D6M5I11M8D74M1D18M1I18M5I29M1D16M1I21M 171/245 69.8% 259/94230402 0.0% 25/245 10.2% 72160536 NA +3672 chr4 + 190214555 135007753 135007752 135007951 199 ATATACACACATATATTTTATATATATTATATATTATATATAATATATTTTATATATCATATATTTTATATATTATATATATTATATATATATATTATATATATTATAT--ATTATATATATTATATATATTATATATATTATATATTATATATATTATATATATATTATATATATTATATATTATATATATTATATATAT chr4 - 94230402 48211469 48211468 48211657 46018746 46018745 46018934 189 ATATCTATACATACGACTAATATATTCTATGTACTGTATAT--TATCTTTTATATATTATATGCCATATTTATCATATATCACA---GCATATACCATATACGATCTATGAATCAT-TGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA---AAAAATCACTGATTTTCTATATT---CCTACTACATAGAT ....x:.:.....::x:.x......x:...:..:.:.....--...x..........:....:::x...x...:......xx:.---::.....::.....::x.x...--..:..-.:x..x....::.x...xx.x:x.xx.:..x.x..:.x...---.x.x..:.:xx..x..x......---:x..:..:...x.. 41M2D41M3D22M2I5M1D41M3D23M3D14M 123/187 65.8% 189/94230402 0.0% 14/187 7.5% 86796284 NA +3444 chr4 + 190214555 135007807 135007806 135007890 84 TATCATATATTTTATATATTATATATATTAT-ATATATATATTATATATATTATATATTATATATATTATATATATTATATATAT chr4 - 94230402 67910059 67910058 67910143 26320260 26320259 26320344 85 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT ...:.:....x:x...:xxx.x.....:...-.x...:...x..x.......:.....x:.......x....:..x......:.. 31M1I53M 62/84 73.8% 85/94230402 0.0% 1/84 1.2% 67097748 NA +3654 chr4 + 190214555 135007823 135007822 135007918 96 TATTATATATATTATA-TATATATATTATATATATTATATATTATATATATTATATATATTATATATATTATATATTATATATATTATATATATATT chr4 - 94230402 67910059 67910058 67910155 26320248 26320247 26320344 97 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATT .....:.....:x...-..x.x....xx...xx:x..:...x..x.......:......x........x...:..x......:..xxx.x...x... 16M1I80M 71/96 74.0% 97/94230402 0.0% 1/96 1.0% 67097764 NA +4271 chr4 + 190214555 135007832 135007831 135007991 160 TATTATATATATA-TATTATATATATTATATATTATATATATTATATATATTATATATATTATATATTATATATATTATATATATATTATATATATTATA---TATTATATATA-----TTATATATATATTATATATTATATATATTTTATATAATATATAATATATT chr4 - 94230402 67910059 67910058 67910221 26320182 26320181 26320344 163 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA------AAATATTTTATTAATGACACACTACATT .....:.....:.-..:..x.x....xx...xxx...:...x..x.......:......x.......x....:..x......:..:.x.x...x...xx.---x....x....x-----..:x...:....x.x.------.x.........xx.xx.:.:.x..:... 13M1I86M3I11M5I16M6D28M 112/154 72.7% 163/94230402 0.0% 15/154 9.7% 67097773 NA +4105 chr4 + 190214555 135007870 135007869 135008016 147 TATTATATATATTATATATATTATATATTAT---ATATATTATATATATATTATATATATTATATATTATATATATTATATATATATTATATA---TTATATATATTTTATAT-AATATAT-AATATATTTTAT---ATATTTTATATATAATATATT chr4 - 94230402 67910059 67910058 67910216 26320187 26320186 26320344 158 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACT .....:.....:x...:xx.xx.....:...---...:..x...x.......:......x.......x....:..x......:..:.x.x...---...x::xx...xx....-..:..x.-....:..x.x.x---.........xx..:.:.:.:. 31M3I59M3I17M1I7M1I12M3I21M 107/147 72.8% 158/94230402 0.0% 11/147 7.5% 67097811 NA +3343 chr4 + 190214555 135008135 135008134 135008195 61 CTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.........::x...x.xx.x........::.:.........:......x.x.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 116810996 73403559 +9252 chr4 + 190214555 135046787 135046786 135046976 190 CAAGAAGGCTGCTGGAGCAGGCAAGGCCACCAAGTCTGCTTAGAAAGCTCAGAAGGCCAAATGAATATTATCCCTAATACCTGCCGCCT-AGTCTTAATCAATGGTGGAAGAACAGTCTCAGAAGTGTGTGTTTCAATTGGCCACTTAAGTTTAGTAGTAAAAGACTGGTTAATGATAACAATGCATCATA chr4 - 94230402 36101319 36101318 36101500 58128903 58128902 58129084 182 CAAGAAGACTGGTGGAACTGGCAAGGTCACGGTGTCTGCT---------CAGAAGGCTAAATGAAAGTTCTGTACATCAGCTGCCACCTCAGTTGTAATCAGTGGTGGAAGGGAGATCTCAGAACTGTTTGTCCCAATTGGCCATTAAAGTTTAATAGTAAAATACTAGTTAATGATTACAATACATTTTA .......:...x....:.x.......:...x:x.......---------........:.......x:..x.x:x:.x:.x.....:...-...:x......:.........::x::........x...x...::..........:.x.......:........x...:.........x.....:...:x.. 40M9D40M1I101M 140/181 77.3% 182/94230402 0.0% 10/181 5.5% 98945468 91269087 +3003 chr4 + 190214555 135055340 135055339 135055398 59 CTTTCTTTCTTCTTTTCTCTCTCTCTCTCCCCTCCCCTCCCCTCTCCTTCATTCCTTCC chr4 - 94230402 61964775 61964774 61964833 32265570 32265569 32265628 59 CTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCC ..x.:.:...x:.x..:..::...::.::.....:....:......:..:x........ 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 73090565 NA +3501 chr4 + 190214555 135055404 135055403 135055566 163 TTCGTTCTTCCTTTCTTCTTTTTC-------TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTT-CATTCCTTC------CTTCCTTTCATTCTTCCT chr4 - 94230402 61964736 61964735 61964905 32265498 32265497 32265667 170 TTGGATCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCC-------CTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCT ..x.x...:.:...::...x....-------:.x..xx::.x.....:.x..x:....:.....:.:.:.-------..:..:.:.:..:.....::...:...:x..x:x.x.x.x:....::..:..xxx.:..:.:...:-..:....:x------..:.::.:...x..:... 24M7I39M7D66M1I9M6I18M 98/156 62.8% 170/94230402 0.0% 21/156 13.5% 73090668 NA +3566 chr4 + 190214555 135055425 135055424 135055513 89 TTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCT chr4 - 94230402 18988810 18988809 18988896 75241507 75241506 75241593 87 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCT--ATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...x..x.:.:..x.x.:..x......:.xx.:..--x...:..........:............x...x.xx...:.x...:..x... 35M2D52M 64/87 73.6% 87/94230402 0.0% 2/87 2.3% 116066615 74147940 +3356 chr4 + 190214555 135055430 135055429 135055540 111 TCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT---TTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTTC chr4 - 94230402 86872021 86872020 86872134 7358269 7358268 7358382 114 TCTATTCATTTCCTTCCTCTTCTGTCTGCATTCTAATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCC ...x:.:x:..:...:..:.::.x::.x.x....xx:.:.xx.:...:..---.::...::x...:.:...:......:.:...x.........xxx:....:.:..:.:..:. 50M3I61M 68/111 61.3% 114/94230402 0.0% 3/111 2.7% 48183409 NA +3221 chr4 + 190214555 135055435 135055434 135055527 93 TTTCTTTCTTTCTTTC---TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCC chr4 - 94230402 93177147 93177146 93177242 1053161 1053160 1053256 96 TTTGTCTGTCTCCTTCCCATGTCTTTGCCCCTCTCCCCCTTCCTCTGGATTTCTATCTTTCTATCTCTCTTCTTTCCATGATCTCGTTCCCCTCCC ...x.:.x.:..:...---.x.....x:::..:..:::...:..:.xxx.....x.......x...:........:.x.xx....x:..:.::... 16M3I77M 62/93 66.7% 96/94230402 0.0% 3/93 3.2% 41878288 NA +3134 chr4 + 190214555 135055457 135055456 135055630 174 TCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCT--CTCTCCCCTCCCCTCTCCTTCATTCCTTCCTTCCTTTCATTCTTCCTTTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 26846730 26846729 26846905 67383498 67383497 67383673 176 TCCATTTTTTTGCCCTTTTCTCTGTGACCATGTCTCTTTTCTCCCCATGGTTTTAATTCACATAACTCTCCCCATTTCACCTCTAAATCCTTTCCTTTCTGGTCTTTGGAATTTCCTCTTTACCTTTTTCTTTTTTTCTTATTCTTTGTGTGTGTGCGCACTATTTGTCTTCCCTT ..:x.:...:.x:.:..:.:...x.xx.:x.x.:.....::.:.::x.xx.:..xx.::x:x.--........x:::.x.::..xx..:.:......:..xx:x..:xxxx....:.....x:..........:..::..x..::..x:x.x:x.x.x:x..x.:.x....:.:.. 63M2I111M 97/174 55.7% 176/94230402 0.0% 2/174 1.1% 108208727 82005828 +3263 chr4 + 190214555 135055486 135055485 135055538 53 TTCTTTCTTTCTTTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCT chr4 - 94230402 34463016 34463015 34463068 59767335 59767334 59767387 53 TTCTTTATTTCTTTTTTCTTTTCTTTTCTCATCCCCCCCCCCCCCCCACTCCT ......x.......:...........::::x..:.:.:....:....x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 100592470 89622085 +4823 chr4 + 190214555 135055498 135055497 135055660 163 TTCTTCTTTTCTTTCTCTCTCTCTCTCCCCTCCCCTCTCCTTCATTCCTTCCTTCCTTTCATTCTT--CCTTTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTTTTTTCTCTCTT-TCTCTCATCT chr4 - 94230402 45185583 45185582 45185748 49044655 49044654 49044820 166 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCT ..x..x:.:x:....:....::..xx:.:.xx:::...x........:...:..:........:..--............:.:.xx:....:.:.:.:..x:.:xx.x:....:x..x::.x.......xx.:x:.::.x..:.:..x:...:..-...:.x.... 66M2I87M1I10M 103/163 63.2% 166/94230402 0.0% 3/163 1.8% 89869915 NA +3093 chr4 + 190214555 135055544 135055543 135055618 75 CCTTCCTTCCT---------TTCATTCTTCCTTTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 44322019 44322018 44322102 49908301 49908300 49908384 84 CCTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTTACATTT ....:.:....---------......:.x...:x:..x...x..:.......::..x...........:..:.::.:.x:x... 11M9I64M 54/75 72.0% 84/94230402 0.0% 9/75 12.0% 90733525 NA +3194 chr4 + 190214555 135055558 135055557 135055618 61 ATTCTTCCTTTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 56101364 56101363 56101424 38128979 38128978 38129039 61 ATTTTGCCATTCCTTATTTTCTTTTTCTTTATTTTTTCTTTCTGTTTTTATTGCCTTTTCT ...:.x..x...:.:x..............x..:.........x.:...x..x.:..:.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 78954194 NA +3151 chr4 + 190214555 135055567 135055566 135055662 96 TTCTTCTTTTTCTTTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTTTTTTCTCTCTTTCTCTCATCTAT chr4 - 94230402 15963352 15963351 15963447 78266956 78266955 78267051 96 TTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTTAGGCTGATTTAT ..x..:..x.x...x.::xx....xx.x......:.......:.....:::::...xx..:...:...:.x.:...x:.:....xxx..x..:... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 119092215 71122340 +3063 chr4 + 190214555 135121449 135121448 135121514 66 AAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAGAAGAAGAAAAAGAAGAGATCCAAGTCATTTCAT chr4 - 94230402 22228922 22228921 22228987 72001416 72001415 72001481 66 AGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGGCAGTCAGTTAAT .:..::.:...................:.:..:..x.:.:.:x.....:..xxxx.....x..x.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 112892527 77322028 +3360 chr4 + 190214555 135127122 135127121 135127182 61 AAGAAACAAATGATTTAAGAGAGAAACAAAACAAAACAAAACAAAATAAAAACCCAAAAAA chr4 - 94230402 79443283 79443282 79443343 14787060 14787059 14787120 61 AGAAAACACATACTTTGATGAAAAAAAAAAAAAAAGCAAAACAGAACAAAAACCCAAAAAA .::.....x..:x...:.x::.:...x....x...:.......:..:.............. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 55683839 NA +4022 chr4 + 190214555 135132351 135132350 135132565 215 CTTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCTCTCCCTCCTTCCCT--CCCTCCTTCCTTCCTTCTTCTTTCTCTCTCTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTT----TCTCTTTCTCTCTTT--CTTCCTTTCTTCCTTTCTCTCT chr4 - 94230402 92912836 92912835 92913049 1317354 1317353 1317567 214 CTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTT-GTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCAC-TTCTCATTTTGGCTATTTCTTT-TCTCTTTCCTT------TTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCT ..:.....xx:..:::::....x.:..xx:xx..x:..:.....:.:x--:..xxx..:.....:x...-x.x...........:.:.:....xx..:x:....x.-....:x:...xx..x.......-.:......x..------...:......:.::xx....x:.:.x..x.:..----...:.:..:x..:..--...x:x.x.:..::.x...... 48M2I19M1D36M1D22M1D11M6D33M4I15M2I22M 133/206 64.6% 214/94230402 0.0% 17/206 8.3% 42219515 NA +3100 chr4 + 190214555 135132418 135132417 135132504 87 CTTTCTCTCTCTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTT chr4 - 94230402 18412882 18412881 18412967 75817436 75817435 75817521 86 CCTCCTTGCCCTCCTTTTCTGACATT-TTTATTGCTATTTCTCATTTTATCCTCCTCATTCTTCCTGTCTTTTTCTTGTTGTTTCTT .:.:..:x.:..:.:.....xx.x..-...x..x..x.....:x:...x..:.::..x.....:..x..x..:.:.....x...... 26M1D60M 59/86 68.6% 86/94230402 0.0% 1/86 1.2% 116719536 73495019 +3017 chr4 + 190214555 135132428 135132427 135132487 60 CTTCCTTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCA chr4 - 94230402 12409677 12409676 12409736 81820667 81820666 81820726 60 CTTCTGTTCTTCCTTTCTGCACTCATCACACTTTCTTCTTCCTTTCCTTTTTTTATTTTA ....:x............x:x:..x..x:x.......:...:...:....:...x...:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 122722751 67491804 +3655 chr4 + 190214555 135132433 135132432 135132639 207 TTTCTTCCTTTCTTTCTTCCTCTTTCTTTCTT---------TTTCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTTTCTCTTTCTCTCTTTCTTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTCTCTCTTTCT--TTCTTTCTTTCTTTTTTGAGAT chr4 - 94230402 92912796 92912795 92913011 1317392 1317391 1317607 216 TTTTTGGCATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTT-TTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCT-TCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGT ...:.xx.x..::....:..:x..x:...x:.---------.:..:..xx..:..:..-..:.....:xx..x::x::....:..::.xxx.:.xxx.:...-.::.x...x:x....:......:.:.:....xx...x:.:::x...:::x:...xx:.x......:.:......:..:..::...:::...--.::.x.::.x..x....:.::. 32M9I17M1D43M1D91M2I22M 119/205 58.0% 216/94230402 0.0% 13/205 6.3% 42219637 NA +3454 chr4 + 190214555 135132467 135132466 135132603 137 TCTTTTTCTTTCTTTCTTTCATTCTTTTGTTCTTTCTTCTTTCTTTCTTTCTTTTCTCTCTTTCTCTTTCTCTCTTTCTTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCTTTCTTTCTTT chr4 - 94230402 85832817 85832816 85832953 8397450 8397449 8397586 137 TCTTTTACCCTTCTACTCCCCTTTTTCCTGGCTTCTTTCTGCCCCACATCTTTTGTGCTTTATTTTTTCCTCTTGCTCTTGTCTCATTCATCCTTCTCCACTTTGTCCTTCTCTCTCACTTCCTTCTGGCTCTATCT ......x.::.::.x..::.x..:..::xxx...::....x:.::x.x.::...x:x..:.x.:.:..:....:x:....x::.:x...x.:::....:x:..:x.:.....:...:x...:.....xx..:.x.:. 137M 77/137 56.2% 137/94230402 0.0% 0/137 0.0% 49299650 NA +3626 chr4 + 190214555 135132532 135132531 135132629 98 CTTTCTCTCTTTCTTCCTTTCTTCCTTTCTCTCTCTTTCTTTCTTCTTTCTTTCTTTCTTCT--TTCTTTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..:...:..:.:.:...:..:..:..x.:...:x.x..:.x.:.:xx..::xxx.....--........:...........x.xx:.::........ 62M2I36M 66/98 67.3% 100/94230402 0.0% 2/98 2.0% 92050607 NA +3046 chr4 + 190214555 135142714 135142713 135142758 45 TTCTAAAAAAAAAAAAAAAAAGCAAAAGCAAAAAGCAAATTATCC chr4 - 94230402 24103556 24103555 24103600 70126803 70126802 70126847 45 TTCTTAGAAAAAAAAAAAAAAACAGAAGCAAAAAGCAATCTCTCC ....x.:..............:..:.............x:.x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 111039158 79175397 +3185 chr4 + 190214555 135149248 135149247 135149323 76 TTTTTTCAAGAGTATATTTTCAGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGCACAT chr4 - 94230402 70982606 70982605 70982681 23247722 23247721 23247797 76 TTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...x....x.x:xx.x.....xx.............:.:.:..:....:.x:...x..:.:.:.::...::..... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 64166642 NA +3050 chr4 + 190214555 135152774 135152773 135152827 54 AATATATACATATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTG chr4 - 94230402 19704273 19704272 19704326 74526077 74526076 74526130 54 AATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...x..x.:.:.......::.......x.....:...x:..:.:.:........ 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 115448501 74766054 +3090 chr4 + 190214555 135152777 135152776 135152829 53 ATATACATATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.....:.x.....:...x:..:.:.......... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 115448503 74766052 +3090 chr4 + 190214555 135152784 135152783 135152836 53 TATATATATATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...:.......::.:.:.:.x.......:.x:...............x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 115448507 74766048 +3255 chr4 + 190214555 135152795 135152794 135152875 81 ATATATGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATGTGTATATATGTGTA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x..:.:.:::.:x.x...:..:..x.............x..:.x::...:x....::. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 53751502 NA +3244 chr4 + 190214555 135152870 135152869 135152989 120 TGTGTATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATATGTGTATATATATATA chr4 - 94230402 35554923 35554922 35555041 58675362 58675361 58675480 119 TATGTCTTTCTGTCTTTACAATTTTAAGTATAGGC-TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA .:...x.x.x...x.x..:.xx.x..x:....x.:-..x......x..x.........:.:....:x:...:.:.:.:..:...:.x.x..:.:..x.x..x:.x..x:.x...:.x.:. 35M1D84M 76/119 63.9% 119/94230402 0.0% 1/119 0.8% 99597947 90616608 +3271 chr4 + 190214555 135152875 135152874 135152930 56 ATATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x:..:......::........x.......:.x:..:............x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 115448601 74765954 +3174 chr4 + 190214555 135152877 135152876 135152974 98 ATATGTATATATATGTGTATATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 40224621 40224620 40224715 54005688 54005687 54005782 95 ACATGTATAAAGCTA---ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT .:.......x.xx.:---...:x...:::...:..xx.x.x....::xxx.x.:.x..x.x...............:........x...:....:.:. 15M3D80M 65/95 68.4% 95/94230402 0.0% 3/95 3.2% 94928256 NA +3025 chr4 + 190214555 135152897 135152896 135152976 80 ATATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATATGT chr4 - 94230402 40224636 40224635 40224715 54005688 54005687 54005767 80 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ...:x.:.::....:..xx.x.x....::xxx:x.:.x..x.x...........:...:........x...:....:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 94928261 NA +3165 chr4 + 190214555 135152899 135152898 135152978 80 ATATGTGTATATATATATGTGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATATGTGT chr4 - 94230402 40224636 40224635 40224715 54005688 54005687 54005767 80 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ...:x.:..:....:..xx.x.x....::xxx:x.:.x..x.x.........:.:...:........x...:........ 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 94928263 NA +3393 chr4 + 190214555 135152918 135152917 135153001 84 TGTGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATATGTGTATATATATATATATAACCCAGGT chr4 - 94230402 4481679 4481678 4481762 89748641 89748640 89748724 84 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGT ...:.....x.x:.....x:.......:....:.:.x.:...:.:..x:.:...:x:xx::......:..:.:..x.:.:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 130671239 59543316 +3056 chr4 + 190214555 135152920 135152919 135152993 74 TGTGTGTGTATATATATATGTGTGTGTGTGTATATATATATATATATATATATATGTGTATATATATATATATA chr4 - 94230402 4481679 4481678 4481752 89748651 89748650 89748724 74 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ...:.....x.x:.....x........:...::.:.x.:...:.:..x:.:...:x:xx.:......:..:.:. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 130671241 59543314 +3081 chr4 + 190214555 135165191 135165190 135165273 83 TGGCTTAAAAGTAAAAAACTTTAGTTTTTTGTTTCTGTTTTTCTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTTGTCCCCC chr4 - 94230402 79158472 79158471 79158546 15071857 15071856 15071931 75 TGGATTAAAAGAATACAAGGTTGGGTTTTTGTTGTTGTTTTTTTTTTTTTGTTTTCAGTGACA--------CCATTGTCTCCC ...x.......x.x.x..xx..:.x........x:.......:.......x....:x.x....--------.:x.....:... 63M8D12M 57/75 76.0% 75/94230402 0.0% 8/75 10.7% 56006719 NA +28380 chr4 + 190214555 135220639 135220638 135221810 1172 AAAGAAATTGGTTTGAAAGGA-AAAATAAAAATGTT---AGAAATTTGCTTGAATTTTTGGCACCTGCTTGTGTCCTGGTGGGCTCCAAATGGAGCCCCTTATTGTTTTTCTTTAATCCATCTTGGAGCTGACAGAGGTGCAAGTTGCAAGTCACAGCTTGCATGCCGTGCCTTAGGATGACAAAGCTCAATAGAAACAATTATTCCAAAGCCCATATCTCATTCATTATTAAACCTATGAAAAGAGTTTTAATTTCCTGTGCAATTACGTAGTGAAATGTCATCCTCT------------GGATGAAAAAGGATTAATTGCTTTTGATAAAATACTGTGTATTTT---TATTTGACTTTTCGGACATCCATTCAATGCAGTAATATCATTTCAATCTGATGTGCTTCATATCATAGAGAATTATTGTAATTTTGCATGGGTAATGTTGTTTAATTATT---TTCTTTTCTCATAAAGAAGGAAGAATAAAATATTAATATTTCTTGGCTC--AAGAGCACAAGCAGCCACACTTTATTTTTCAAATCAAGTTGGAAACTCTTTTACAAATGAGCAGTAGCAAAATATGATTAATGTATTTTGTGAGAGATTCATAAGATTACCTCAAATAAAATTTATATGTCATGTGTAGGCACAAATTACAATTTCTATCATTTGTATTTGTTTTCCACTTACCAATGATTATTAAGTAATCCATAAAACAATGACTAGTCACTTTCTTCCTGTCACACATGTGAGTTCAATGTATTCTCCTA-TAAAGACTAAAATATGGCAAAGGAATCTACAAGAAAATAAA-------------------CTTTCCAAATACT--ATGAGACTTACTCTTTATGGTGACAGACCAGGACGTCCCTATTAGAGTGAGACTAGCATTTGAGAAATAAGGGACTGGAAAGCCACCTTGACATTTTCACCAATTGCATCCAGCCCCGTAAATGCTTGGC--TGCTATGAA---------TTTAATTATTCTTTTGCATTTCTGAAAATAGTTGGAATAGACA-TTCAATAGAAAATGAATTGTTTAGCAATTTCACCTTCCTACAAAGAAAATATAATTTTATATTTGATAGTATTCATTCTACAAATAGCTATTATAGTCACTTATATTAAATAGCAAAGAATAAAATGTGGAAT-AATATGTGCAGTGTTTTCTGAAA-AATTATAATACAAGAAGAAAACAGCATT chr4 - 94230402 65295920 65295919 65297091 28933312 28933311 28934483 1172 AAAAACATGCACTTGAAATGAGAAAACAAGGAAGAGCGAAGAGACTGGCTTGTGCTTTTGGCACCAGTTTGTCTCCTG-TGGTCTCCAAATGAAACCCTGTATTGTTTTT-GCTAATCCATCTCTGAGGTGACAGAGGTGCAAGTTGTGAGCCACAGCTTGCACGCTGTGCTAGAGAATGGCAGTGCTCAATAAAAACAATTATTTCAAAGTCTGTATCTCATCCATTATTAAACCTGTGAAAAGAGTTTTAATTTCCTGTGCAATTATATGGTGCAATGTCATATTTTATGGAGGGGGGAAGAGGAAAAGAGAGT--TTGCTTCTGATAAAAAAA---ATATTTTTCATATTTTATGGCTTGGATGAATGTGTACCTCGGGA--CCTAATTTAAGCTCATATACTTCTCTTCAGTCAGAATCTGAGAAAGTCCACTTAGCTA------TTCAATTATTTCATTTTTTCCTCATAAAAAAAG----ATAAATTATTAACATCTTGCAGTTTGAAACACCACAAGAAA----ATGTTGTCTTTTTATCCATGT--GTAGTTATCTTGCTGATGTGTAGTAGCTAGGAATGATTAATGTATTCTGTAATGAATTCATACAATTGCTATGACTAATGCTTCCATGT--------GACACAAATCAGATTGCCTGTTACTATTATTTGTTTTCTACTTAGCAATGATTATTAACCAATCCAT--AACAATGAATA-------TTTTCCT-TTAAATATATGGTGACAAATTATATGCATACTGGAGATAAGCTCACTGAAAATGGATCTTTGGAAAAAGAAAGACAAACCCAAAAGTCTCCCTGTTAAAACAGTTAGCAAGGCTT-CTTTGCATAGTGACAGAACCAGACAGTCCCAGTGGAGCTGAAATCTCATCTGTGAGAATGCAGAGTAGCAGCATCTTCTGACATTTAGACCTCTAGTAACCAGTCTCAGCTA-GCTTTGCATCATTTTGAAATTTAATTCTTTTATTGTGCTCTTCTATTTCAGAAAATATTAGGAATAAACATTTCAAAAGAA----------CTAGAAATTCCACCATTTTACAAAGGAACTGCAACTTTATGTGTCTCAGCATTCAGTGTTCAAACG-----TACTATCATTTTGTTTTTGTGCAAGATAATGAACTATTGAGTAAATATTCATAGGAATTGAGGAAATGATTATCATATGAGGAAATGAAACCACT ...:.x..xx::......x..-....:..::.x.xx---...:.:.x.....x::..........x.:....x.....-...x.........:.:...:x..........-x:..........:x...x..................::..:...........:..:....:xx..:...:..:x........:...........:.....:.::........:.............:..............................::.:...x........x:.:.------------:..x.....::..x.--......:........x.x---:......---.....x.:xx:.:...::xx::.x:.x:x.:.x.--x::.x..:..x..x..:.:....x:x...xxx.....:xxx.x..x.:::.x.:.x..------..:.......---..:...:........:..:.----.....x......:..:.:x::.:.:--..x.x......x.:----.:x..:.:...:x.x:..x..--.x.::.x.:..:.x:...x.:......x.::x..............:...:.x::.......x:...:.:x::.x...x::..x:....--------.:.......:.x.x.x:..:.:.:.xx...........:.....x.............x:.......--........x..-------.:.....-.:.x.:..:..:xxx...xx...x:x.x..-.::...:x.:xx:.:x.x...x.:....x::::....x...-------------------..x.:x...:.x.--:::..:...-..:.x:..:........x.x:...:x:..:.x.:...:x::.x.xx...:..x..:.xx:x:..x.:.x.:xx:x:::........xx...xx.x.:.x....:.:.:xxx.-....x..--:::.x....---------...x...:.x..:..x:.....x.......x.x......:...-.....x....----------:...x....:....x.::.......:..x.::..:.....:.x.xx:..:.....x.x.x....::-----..:x:...:..xxx..xx:.:xx.:.x...:..x.:.x..:.-.....x:::..x:x..xxx....-:.....x...::..:.:.x:.x.x..:. 21M1I14M3I39M1D31M1D178M12I15M2D18M3D7M3I34M2D58M6D10M3I20M4D25M2I14M4D21M2D89M8D67M2D11M7D7M1D30M1I41M19I13M2I9M1D112M1D7M2I9M9I43M1I10M10D66M5D42M1I23M1I28M 750/1112 67.4% 1172/94230402 0.0% 120/1112 10.8% 69924719 NA +3677 chr4 + 190214555 135231120 135231119 135231241 122 TCTTTTTCCCATCTATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATATATATACATATACTTATATGAGAACAAATTATAAATAAA chr4 - 94230402 88147171 88147170 88147284 6083119 6083118 6083232 114 TTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATATAGGGAGAAGCATATATCAACA-----CTACATCAGAAAGAATACCAAGTGAA .:.....:::.:x.:..x:x..............:.x.:.:...:.:.............---..:.:.:.x:x.x.x:.......xx...-----:..:..x....x:...xx:..:.:.. 60M3D28M5D26M 77/114 67.5% 114/94230402 0.0% 8/114 7.0% 47083949 NA +3101 chr4 + 190214555 135231129 135231128 135231188 60 CATCTATATATATATATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395803 8395802 8395862 85834541 85834540 85834600 60 CATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...xx.:..:...x..:....:...::x..:..xx.:.................x..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 126835326 63379229 +3313 chr4 + 190214555 135231130 135231129 135231204 75 ATCTATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x.:.::...x.:..:...x..:....:...::x:...:xx.:.................x.....x.::x... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 126835334 63379221 +3029 chr4 + 190214555 135231131 135231130 135231174 44 TCTATATATATATATATATATATATATATATATACACACACACA chr4 - 94230402 45271685 45271684 45271728 48958675 48958674 48958718 44 TCCATATCTATATATACACACATATATATGTATACAAACACACA ..:....x........:.:.:........:......x....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 89959446 NA +3021 chr4 + 190214555 135231132 135231131 135231207 76 CTATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATATATAT chr4 - 94230402 4481678 4481677 4481753 89748650 89748649 89748725 76 CTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ..:...:.:.x.x:.....x:.:.:.:...:.:....x...:.....:x....:..x.xx...:.:.::..:.:.. 76M 49/76 64.5% 76/94230402 0.0% 0/76 0.0% 130749454 59465101 +3124 chr4 + 190214555 135231133 135231132 135231190 58 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395805 8395804 8395862 85834541 85834540 85834598 58 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x.:..:...x..:....:...::x..:..xx.:.................x..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 126835328 63379227 +3134 chr4 + 190214555 135231133 135231132 135231191 59 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.x.:::.:.::.:.::.:...:........xx........::............. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 120266307 69948248 +3327 chr4 + 190214555 135231133 135231132 135231202 70 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...x.:..:...x..:....:...::x....:xx.:.................x.....x.::x... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 126835332 63379223 +3569 chr4 + 190214555 135231133 135231132 135231206 74 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395797 8395796 8395870 85834533 85834532 85834606 74 TGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.::...x.:..:...x..:....:...:.x:...:xx.:.................x.....x..:x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 126835336 63379219 +3620 chr4 + 190214555 135231133 135231132 135231208 76 TATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 8395795 8395794 8395870 85834533 85834532 85834608 76 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.::...x.:..:...x..:....:..::.x:...:xx.:.................x.....x..:x... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 126835338 63379217 +3093 chr4 + 190214555 135231134 135231133 135231192 59 ATATATATATATATATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:.:xx.:.................x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 126835330 63379225 +3103 chr4 + 190214555 135231134 135231133 135231193 60 ATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....:.x.:::.:.::.:.::.:...:....:...xx........::............. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 120266309 69948246 +3118 chr4 + 190214555 135231134 135231133 135231186 53 ATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x..:....:...::x..:..xx...................x..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 126835324 63379231 +3175 chr4 + 190214555 135273370 135273369 135273447 78 TAAATAGGTTACTAACTATATATCCATATATGTACACCAATGCACACACACACACATACACACATATATATATAATTA chr4 - 94230402 71167157 71167156 71167234 23063169 23063168 23063246 78 TAAATTGGTAAAAAGCCATAAAGTCATGGCTGTAAAAAAAAAAAAATACACACACACACATATATATATATATAATTA .....x...x.xx.:.:...x.x:...:xx....x.xx..x:x.x.:.........:...:.:............... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 64106213 NA +3239 chr4 + 190214555 135305580 135305579 135305656 77 GTATTTTTCATTTTTCTCTTTAAATTGTGTTTTTATTTTTTACTTTGTGTGTGTGTGTGTGTGTGTTTGTTTTAATT chr4 - 94230402 70091893 70091892 70091969 24138434 24138433 24138510 77 GCATTCTTTTCCTGTATTTCTAATATTTTTTTTTATTCTACTGTTGGTTTGTGTGTATGTGTGTGTTTGTTTTAGTT .:...:..:x::.x.x.:.:...xx.x.x........:.x:xx..x..x.......:.................:.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 65213687 NA +3153 chr4 + 190214555 135310107 135310106 135310190 84 AAAACATGAGAAGATAAAATACATCACAATTAGGAAAAAGAAAAACTATATAGTCTCTCATTATGAAAATACTAAAATGATTGT chr4 - 94230402 18944936 18944935 18945012 75285391 75285390 75285467 77 AAAACATAAGAAGGTAATATATATCAAAATTAAAAAAAAGAAAAA----ATGG--TTTCATTA-GAAGATTTCATAGTAAATGT .......:.....:...x...:....x.....::...........----..:.--.:......-...:..x::.x.:.:.x... 45M4D4M2D8M1D20M 60/77 77.9% 77/94230402 0.0% 7/77 9.1% 116365171 73849384 +17458 chr4 + 190214555 135326447 135326446 135327153 707 GGTGATTTTAAAGTTAACAGACCTACCGTTTCTGTTTTGCATGCTTTCCACATTTAT------AAGCTTACTGCTAACTATTTTGTTGTTTAAATGAAAGACTGTGCTGACAATTAAATGGAGGTTCATGCATGCTTCACTGCCACATCTTATTACCATCGACAT-AGAAGAAGCAGAACGCTGAAATTACTGGTTTTAGCCTGCATCTGCATGGCCTTATTATACCTACTAAGGTGAAAATGTCAGCTTTAAAGAATGTAATTATATAACTTAAACTGCAGTGGTGGCAAGGTTAAATTCTTGCTT--------------------TACTGATCTTAAAACAAACCATAGTTTCTAGGTCTGGAAGTGCCTTTTGTTTATAAATTTG----ACCTCTCACTTT---------CATTCCTTCTGCTGT-----TTTTCTTCAATAAGGTTTTCAACACAGGTGTTAATTCAATATAGATTTT----TGAACTTTTTCTACTTCAGTCTGTTTAAATACATACTATTTCCAACAATGAGAAGGCATACAGCA---TACATATTATTGTATTGGACTCTTCCTATCTGGAAAGTTCAAGTGTAAAATACACTTTAAGATGCTTTGAAG--------------TAAAGCAACCCAAGTTAATTGTCAATAATTTTAACTTGCAAATGCAAATTACAACCTAGGTTAAT------AAATATATTTTTAAATTATTGCTAAAAACTAAATGTCTTTAGTTAACATTTAATTATCTATTGAATAT chr4 - 94230402 65232989 65232988 65233743 28996660 28996659 28997414 755 GGTGCTTTTAACTTTCCCTGTTTAGCCATAGCTATTTGAGATGCCTCCCACATTCACTGTAGAAAGCACACTGTTAACTAACTTCTTGTTTAAATGAAAGGCTATGCTGACAATTAAATGTGGGATCATGCATGCTTCAGTGCCATACCTTATTATAATCAACGTGAGTAGAAGCGGAGTGCTGAAATTATGGGTTTTATTCTGCATCTGCATAGCATTATTATGCTTATCAAGGTGAAAATGTCGACACTGAAGAATATAATTGTGTACCTTAAGCTGCAGCAATATTTAAACTGAGCTCCTGCCTCCACTATTAATGCATCAGAGCACTACTCTTAAGAGGCGCTATAACTCTTTATGTAGACAGAACTTTCAGTTCATGAATTTATTTTGTTTCTTGCtttttaaaaaaatatttatttatttattGAGATTTACCTATATAAAACCTTCTGTTTGTATATTAATTCAATATAGATTTTCTGATGCATTTTTTTTCCTT-------TTTAA--------------CAA-AGTCAGAGACCAGACAGAACAGTGTACATTTCTATATAGCTCCACTGCCCTCCAG-GAGATCAAGTGTGAAATGAGATCAGAGACACATTGACAGTCCACGCGTGACCTGAAAAAACTTAAGCTAGTTATCAGTAATTTGGAGCTGTGGCTGTAGTCTTCATTCTTATTGTATCAAACCaaataaaataataaaataattCAGCGAATTATCTGTGTTTAGTAGAT-TACAATTTTCATCTGAACAT ....x......xx..xx.x.x::x:..:.xx..:...x:x....:.:.......:.:------....x:....:......x:..x...............:..:................x:..x..............x.....:.:.......:x...:..:.-..x......:..::..........:x.......x:............:..x.......:.:..::..............::.x:.:......:.....:.:..x.....:......:::.:x:x.:::.:.::..:...:.--------------------:...:x......:.x:x:.:...::.::.x:xx:x.:x..x:.:..:x...:..:.....:----:::...::....---------:...:x..:xx:.:.-----...x.:.xx....::::...x::x::x:.:...................----..x.:.....:.x...-------.....--------------...-.:.x...::x..x....x.---.::.:...x:.:...x.xx.:x:.x.:x..::.-:..x........:....:x:x.:x:...::.x....x:--------------.:..:x...::...:..:..:...:......x:.x:..:::x..:.:x:.x..x:..x:x.xx..------.....x.x.xx....x..x.x.x:x:..:..xx...x......x:.:-.x:....x..xx:....:.. 57M6I102M1I141M20I61M4I12M9I15M5I49M4I16M7D5M14D3M1D19M3I33M1D38M14I65M6I47M1D20M 448/683 65.6% 755/94230402 0.0% 96/683 14.1% 70093458 NA +3192 chr4 + 190214555 135357855 135357854 135357905 51 GCCACAACACCCAGCTAATTTTTGTTTTTTGTTTTTGTTTTGTTTTGTTTT chr4 - 94230402 50466490 50466489 50466540 43763863 43763862 43763913 51 GTCAGGATATTCGGGCAGTCTTTGTTTTTTGTTTTTGTTTTGTTTTGTTTT .:..x:.:.::.:.x:.:.:............................... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 84891365 NA +3263 chr4 + 190214555 135374060 135374059 135374112 53 GAGTTTTTTTTGTTTGTTTGTTTTTTAAATAAGAAATGTAGCATTGTAAAAAA chr4 - 94230402 89565309 89565308 89565361 4665042 4665041 4665094 53 GGGTTTTTTTTGTTTGTTTGTTTTTAAAGTAATAAATGTCAAATTTTATAAAA .:.......................x..:...x......x:x...x..x.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 45808751 NA +3161 chr4 + 190214555 135384432 135384431 135384515 84 AATATTCCATCTAATTGATATGTGATGTGATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTTTCTTCTGAG chr4 - 94230402 8983569 8983568 8983652 85246751 85246750 85246834 84 AGTCTTCCGTTGAAATGTTTTGCAATGAGAAATTTTTCTGTTCCTGTGTGTGTGTGCGTGTGTGTTTGTCTCTGCTGTTTTGAG .:.x....:.:x..x..x.x..::...x..x..x.x.x...x:x............:........x...xx..x:.x..:.... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 126400863 63813692 +3160 chr4 + 190214555 135417009 135417008 135417067 59 GTGTATATGTATGTATGCATATGCATATATATATATACATATATATATATATATATATA chr4 - 94230402 52481249 52481248 52481307 41749096 41749095 41749154 59 GCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA .:...:..........:....:...:...:xx.....x.:x.....:.:.:.x...... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 82935760 NA +3521 chr4 + 190214555 135417043 135417042 135417105 63 ATACATATATATATATATATATATACACACACGTATATATATATATATATATACACACACACG chr4 - 94230402 7596413 7596412 7596475 86633928 86633927 86633990 63 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACG .....x..::...:.x..:...........:.:.:....:.x.:.....:x...:...:.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 127820630 62393925 +3065 chr4 + 190214555 135448336 135448335 135448398 63 GTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACAAAAAACCCATCTGTACATCACCA chr4 - 94230402 59596906 59596905 59596967 34633436 34633435 34633497 62 GTGAGAGGGGAAAA-AACAAACAAAAATAACACCCACACAAAAAGCCCCACTATAGAGCACCA ..x...:..:...x-........:...x:...:...........:...xx..:..x.x..... 14M1D48M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 75851430 NA +4104 chr4 + 190214555 135535861 135535860 135535983 123 GAAGAGGAGAGGAGAAGA--GAGGAGAGGAGGGGAGGGAAGGGGAGGGGGGTGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGAAAAAAGAAAA---GAGAAAAGAC-AAGACAAGACATACAG chr4 - 94230402 40465775 40465774 40465898 53764505 53764504 53764628 124 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAG-----GAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAG .:...:.:..x..x....--...:.:...x:.:..:.x.......::x.....x......::..::....-----..:........:......:x...:---..:.xx.:..-..:....x...x.x.. 18M2I50M5D24M3I10M1I16M 85/118 72.0% 124/94230402 0.0% 11/118 9.3% 95070086 NA +3061 chr4 + 190214555 135535871 135535870 135535948 78 GGAGAAGAGAGGAGAGGAGGGGAGGGAAGGGGAGGGGGGTGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGAA chr4 - 94230402 40472542 40472541 40472619 53757784 53757783 53757861 78 GGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ..:...:.:.::::.::.::...:::..::.........x....:.....xxx:.....x..::.:::x:..:..... 78M 47/78 60.3% 78/94230402 0.0% 0/78 0.0% 95063329 NA +3079 chr4 + 190214555 135535900 135535899 135535950 51 GGGAGGGGGGTGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGAAAA chr4 - 94230402 23027826 23027825 23027876 71202527 71202526 71202577 51 GGGATGGGGGGAGGGAAGGGGGAGGTGCGGAGGGAAGAAAAGAGGAGAAAA ....x.....x:....:...:.:..x.x....:.:...::........... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 112508074 77706481 +3201 chr4 + 190214555 135535900 135535899 135535950 51 GGGAGGGGGGTGGGGAGGGGAGGGGAGAGGAGAGGAGAGGAGAGGAGAAAA chr4 - 94230402 23025356 23025355 23025406 71204997 71204996 71205047 51 GGGATGGGGGGAGGGAAGGGAGAGGTGCGGAGGGAAGAAAAGAGGAGAAAA ....x.....x:....:.....:..x.x....:.:...::........... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 112510544 77704011 +3526 chr4 + 190214555 135556238 135556237 135556294 57 TCTAATCAC-CTCTCTCTCTATATATATGCATATACTATATATATATATATATATATA chr4 - 94230402 71295514 71295513 71295571 22934832 22934831 22934889 58 TTTAATCTCTCTCTCTCTCTATATGCACACACACACTATATATATATGTATGTATATA .:.....x.-..............::.::..:.:.............:...:...... 9M1I48M 47/57 82.5% 58/94230402 0.0% 1/57 1.8% 64260724 NA +3128 chr4 + 190214555 135556245 135556244 135556298 54 ACCTCTCTCTCTATATATATGCATATACTATATATATATATATATATATATATA chr4 - 94230402 71295518 71295517 71295571 22934832 22934831 22934885 54 ATCTCTCTCTCTCTCTATATGCACACACACACTATATATATATGTATGTATATA .:..........x.x........:.:..xxxx...........:...:...... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 64260727 NA +3035 chr4 + 190214555 135556248 135556247 135556296 49 TCTCTCTCTATATATATGCATATACTATATATATATATATATATATATA chr4 - 94230402 71295523 71295522 71295571 22934832 22934831 22934880 49 TCTCTCTCTCTATATGCACACACACACTATATATATATGTATGTATATA .........x.....:::..:.:..xx...........:...:...... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 64260725 NA +3550 chr4 + 190214555 135588550 135588549 135588628 79 CTGCAACCTCCGCCTCCTGGGCTCAAGCGATTCTCATGTCTCAGCCTCCTGAGTAGCTGGGACTACAGACACACACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:..:..:xx:x..:.....:.....:.x...x..x.x........::::.........:.....--..:::...... 66M2D11M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 117391424 72823131 +3369 chr4 + 190214555 135610228 135610227 135610290 63 GTTTCAACCATTATCTCTTCTAGTGTTTTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTCCC chr4 - 94230402 65759163 65759162 65759225 28471178 28471177 28471240 63 GTTTAAGTCATTTTAACATTTCCAGGTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTCCC ....x.::....x.xx.x.:.xxx.x.x................................... 63M 50/63 79.4% 63/94230402 0.0% 0/63 0.0% 69851065 NA +3239 chr4 + 190214555 135627624 135627623 135627719 96 CATTTTTATGGCTGGGTAATGTACCATCATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964797 14964796 14964884 79265519 79265518 79265606 88 CATTTATATAGAGGTGTTGTGGAC--------ACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x...:.xx.x..x:..x..--------.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 24M8D64M 60/88 68.2% 88/94230402 0.0% 8/88 9.1% 120662827 69551728 +3233 chr4 + 190214555 135627638 135627637 135627725 88 GGTAATGTACCATCATATA---------TATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964788 14964787 14964884 79265519 79265518 79265615 97 GGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:..x..:.xx.:.....---------.:x.:.:.x....:.x.:::.:.::.:.::.:...:....:...xx........::............. 19M9I69M 59/88 67.0% 97/94230402 0.0% 9/88 10.2% 120662850 69551705 +3822 chr4 + 190214555 135627651 135627650 135627737 87 CATATATATATATATATATATATATATATATATATATATATATATACAC--ACACACACACACACACACACACACACATACACACACAA chr4 - 94230402 8395787 8395786 8395875 85834528 85834527 85834616 89 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ...:.:.:...:.:.::...x.:..:...x..:....:...::x....:--.:.................x.....x..:x.:.x.x.. 49M2I38M 62/87 71.3% 89/94230402 0.0% 2/87 2.3% 127231864 62982691 +3568 chr4 + 190214555 135627652 135627651 135627718 67 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::...x.:..:...x..:....:...::x..:..xx...................x..... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 127231856 62982699 +3095 chr4 + 190214555 135627653 135627652 135627714 62 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 127231852 62982703 +3286 chr4 + 190214555 135627653 135627652 135627716 64 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.::...x.:..:...x..:....:...::x..:..xx...:...............x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 127231854 62982701 +3319 chr4 + 190214555 135627653 135627652 135627723 71 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx........::............. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 120662839 69551716 +3606 chr4 + 190214555 135627653 135627652 135627722 70 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x..... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 127231860 62982695 +3611 chr4 + 190214555 135627653 135627652 135627728 76 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACATA chr4 - 94230402 8395795 8395794 8395870 85834533 85834532 85834608 76 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.::...x.:..:...x..:....:...::x..:..xx.:.................x.....x.::x... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 127231858 62982697 +3182 chr4 + 190214555 135627656 135627655 135627721 66 ATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 120662837 69551718 +3429 chr4 + 190214555 135627662 135627661 135627737 76 ATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACATACACACACAA chr4 - 94230402 8395788 8395787 8395863 85834540 85834539 85834615 76 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA ..:.:.:...:.:.::...x.:..:...x..:...:::.::.x:...:xx.:.............:...x...... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 127231874 62982681 +3111 chr4 + 190214555 135627663 135627662 135627740 78 TATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACATACACACACAATAT chr4 - 94230402 4481679 4481678 4481756 89748647 89748646 89748724 78 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTAT .:...:.:.x.x:.....x:.:.:.:...:.::...x...:.....:x....:..x.xx...:...:::.....x... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 131145984 59068571 +3421 chr4 + 190214555 135633451 135633450 135633538 88 ATATATATATGTATATATACACACACACACACACATATATATACACATACATATATACACACACACACACATATATATATATATATAA chr4 - 94230402 8395788 8395787 8395875 85834528 85834527 85834615 88 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:.:.:.....:.::...x...:::.:x:...:..:...::x:....xx...:.:.............x.:.:.x..:x...x.x.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 127237663 62976892 +3211 chr4 + 190214555 135633453 135633452 135633538 86 ATATATATGTATATATACACACACACACACACATATATATACACATACATATATACACACACACACACATATATATATATATATAA chr4 - 94230402 8395788 8395787 8395873 85834530 85834529 85834615 86 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAA ..:.:.:.:.:.:.::.:.x...:::.:x:......:...:.x:.:.:xx...:...............x.:.:.x..:x...x.. 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 127237665 62976890 +3749 chr4 + 190214555 135633455 135633454 135633538 84 ATATATGTATATATACACACACACACACACATATATATACACATACATATATACACACACACACACATATATATATATATATAA chr4 - 94230402 8395788 8395787 8395871 85834532 85834531 85834615 84 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAA ..:.:.....:.:.:..:.x...:::.:x:.:....:..::.x.....xx.................:.x.:.:.x..:x.... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 127237667 62976888 +3282 chr4 + 190214555 135671551 135671550 135671680 130 TAATGCAGAGGTAAACCAACAAGTCATT-TTACAGTTGAAGTT--TTTTAAGTTTGTTTTCTGTTCCATAGTCTGTCTTTCTCTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTT chr4 - 94230402 7586069 7586068 7586186 86644217 86644216 86644334 118 TATTGCAGAAAAATATTTGTTAGTTATGGTTACAATAAAAGCTATTTTTAAGTT---------------AGTTAGACTTTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTTT ..x......::x.x.::x::x...:..x-.....:.x:...:.--.........---------------...:x.x....:....xx...........::...:......::.xx..x...:x...:...:.. 28M1I14M2I9M15D64M 80/115 69.6% 118/94230402 0.0% 18/115 15.7% 128085482 62129073 +3146 chr4 + 190214555 135671619 135671618 135671697 79 TCTGTCTTTCTCTTCTCTTTTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTT chr4 - 94230402 15963357 15963356 15963435 78266968 78266967 78267046 79 TTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT .:...x:..x...xx....xx.x......:.......:....::::::...xx..:...:...:xx.....x....... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 119708262 70506293 +3979 chr4 + 190214555 135671640 135671639 135671798 159 TTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 45185583 45185582 45185741 49044662 49044661 49044820 159 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCT ..x..x..:x:....::.......xx::.:xx..:.:.x:...x................x..:..:x::..::.......:..xx:.::.:::.:.:..x:.:xx.x.....:x.:x::.x..:...:xx..x:..:.xx.::...x:.:::...::. 159M 90/159 56.6% 159/94230402 0.0% 0/159 0.0% 90486057 NA +3046 chr4 + 190214555 135671655 135671654 135671760 106 TTTCTTCCTTT-CTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCT chr4 - 94230402 3338200 3338199 3338306 90892097 90892096 90892203 107 TTTTTTCCTTTGCTATCTTTGCTTCCTGCTTCTTTTCTTTCCTTTCTTGCTTTTCAAACCTGATGCATATTACTTATTTTTTGCTTTGATTATTCTATTTTCCTTTT ...:.......-..x.....x:...:.x...::.......:.......x....::xxx.:.xx.x:x:x..x:..x.....:x:.:.xx:.x.:..x:.......:. 11M1I95M 68/106 64.2% 107/94230402 0.0% 1/106 0.9% 132333455 57881100 +3437 chr4 + 190214555 135671663 135671662 135671801 139 TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTCCTTT----CTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 32913650 32913649 32913792 61316611 61316610 61316753 143 TTTCTTTCAGAATTTTTATCTTTACATCTGTCCTGCCCTTCTTTCACTTCTTTCCTTCCTTTAAAAATATGCATTGCTTTTATTCCTTGCTACTCCTCTACCTAGCCTCATATTTTTCCACTTCTACTCCCTCTCCCTCTCTT ........xxxx...:.x.....x:x...x.:..x:.:.......x:.......:.......----x.x.x:x..x....:x...:..x..x..:::..x.:.xx.:..x.x::..:.:x.:.::x:...:..:::.::..:. 62M4I77M 84/139 60.4% 143/94230402 0.0% 4/139 2.9% 102758013 87456542 +3590 chr4 + 190214555 135671684 135671683 135671847 164 TTCTTTCTTTTCTTTCTTTCTTTCTTTTCT-TTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT-------TCCTTCCTTCTTTCCTTCCTT-CTTTCTTTCTTTTTTCT chr4 - 94230402 34857649 34857648 34857821 59372582 59372581 59372754 173 TTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCT ..:..:..:..x..xxx..:x::....x:.-..::.....x.:x..x....:....:x..x:..x.:::...x:.x..x.::.:....::x.:x..::..:.....::...:x.::..:..x..x:.-------.::......:.x.:x...x..-.....xx.x.....:.. 30M1I96M7I21M1I17M 100/164 61.0% 173/94230402 0.0% 9/164 5.5% 100814035 89400520 +3107 chr4 + 190214555 135671702 135671701 135671804 103 TCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 83048900 83048899 83048998 11181405 11181404 11181503 99 TTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCC--CCTTCAGCGCTTC--TCCATCCATCC .:.x.:..........x..:.......::....::.x.x..::::x.:...x...x.x:x...:..::...x...--.....xx:x....--...x...x... 75M2D13M2D11M 67/99 67.7% 99/94230402 0.0% 4/99 4.0% 52622802 NA +3328 chr4 + 190214555 135674737 135674736 135674807 71 AAGAAAGAAAGAAAGAGAGAGAAAGAGAGAGAGAAAGAAGAAAAGAAAGAAAAGAAAGAAGAAAAATTTGT chr4 - 94230402 9237695 9237694 9237765 84992638 84992637 84992708 71 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGT .:.::.x.x..x::......:.::x..x.:...:......:...:....:...:...:...::.:...... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 126437042 63777513 +3295 chr4 + 190214555 135688094 135688093 135688152 59 AATTTCT---TTTTCTTTTTCTTTCTTTTTTTTTTTTTTGTTGTTGTTGTTGTGTCTCTGCC chr4 - 94230402 35048457 35048456 35048518 59181885 59181884 59181946 62 AGTTTCTCTATTTTCCATTTTTTCCTTTTTTCTTTCTTAGTTGTTGTTGTTGTTACCCTGCC .:.....---.....:x...:..:.......:...:..x..............xx.:..... 7M3I52M 48/59 81.4% 62/94230402 0.0% 3/59 5.1% 100639637 89574918 +9968 chr4 + 190214555 135699933 135699932 135700143 211 ATGCATAGTGTTCGTCTCTTAAATTGTGCCTCATTCAGTTGGAAAATGCCTATCAGCATTCTCTTTTCTGACACACAGTAATTAGAAAGTTAATTTTGCAAATCTCATAAGCTTAGCACTTTAAAGATTTA-TCTGCATTATTTAAATGGCATATTTTATAATATTTGGAGCATTCTAAGCAACTTTATTAAATTCAAATAAATTATTATTT chr4 - 94230402 65096772 65096771 65096983 29133420 29133419 29133631 212 ATACATAATGTTTAATGCTAGGAATGAACTCCATTCGATTTGAAAATGCCTATCAGCACGGTATTTTGTTGCGTACTGTAATTACAAAGTTAATTTTGCAAATCTCATAAGCCAAGCACTTTGAAGTTTCATTTTACATTCTTTAAATACTGGTTTTAATAATGTTACAAGTATTTTGAACAACTTTATAAAACTCAAGTAAGTTATTCTTT ..:....:....::x:x..x::.x..x:.::.....::..x.................:xx.x....x.x:.::..x.......x...........................:x........:...x..:.-.:.:....x.......:x::xx...x.....:..xx:..:...:.:.:.........x...:....:...:.....x... 131M1I80M 154/211 73.0% 212/94230402 0.0% 1/211 0.5% 70603161 NA +3256 chr4 + 190214555 135702522 135702521 135702580 59 AGCAAGAATCTGCCTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGAAAAAAGAAAGA chr4 - 94230402 49250028 49250027 49250086 44980317 44980316 44980375 59 AGCAAACATCTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAA .....:x....x.x...x.xx.........:............:.x.:..:......:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 86452494 NA +3093 chr4 + 190214555 135713723 135713722 135713822 100 CCTTCCTTCCTCCCTCCATCCCTCCCTCCCACTCTCTCTCTCTCTCTCCCTTTCCCTTTCCCTCCTTTCCCCTTCCCCTTCCCTTCCTTTTTTTTTTTTT chr4 - 94230402 84759117 84759116 84759216 9471187 9471186 9471286 100 CCTGCCATTCTATTTTTAGGTTTCAATACCGCTTTGTCTGCATCGTTTCCCCTCCAACCCCCCCCCCCTCCCTCCCCATACCCTTTTTTTTTTTTTTTTT ...x..x.:..x::.::.xx::..xx.x..:..:.x...x:x..x:.:..::...xx::...:..::::....:...x.x.....::............. 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% 50954606 NA +3055 chr4 + 190214555 135713767 135713766 135713822 56 TCTCCCTTTCCCTTTCCCTCCTTTCCCCTTCCCCTTCCCTTCCTTTTTTTTTTTTT chr4 - 94230402 69899687 69899686 69899742 24330661 24330660 24330716 56 TCCCCTCTCCCCCTCTCCTCCTTTCCACTTCCCCTTTTGTTCCTTCTGTCTCTTCT ..:..::.:...:.::..........x.........::x......:.x.:.:..:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 65814080 NA +3079 chr4 + 190214555 135730622 135730621 135730692 71 TGCTTCTTGTATATATATATACACACACACACACACACACACATATACATACACACACGCACACACACACA chr4 - 94230402 66904837 66904836 66904907 27325496 27325495 27325566 71 TGCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATA ....x:..x:......:..:::.........:..............x:.x::x..x::.:.:...xx..:. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 68825785 NA +3114 chr4 + 190214555 135730625 135730624 135730695 71 TTCTTGTATATATATATACACACACACACACACACACACATATACATACACACACGCACACACACACATAT chr4 - 94230402 66904842 66904841 66904912 27325491 27325490 27325561 71 TTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..:.::.....:..::..........:...........:..x..x:.x..x::::::...xx..:..::.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 68825783 NA +3005 chr4 + 190214555 135730634 135730633 135730696 63 ATATATATACACACACACACACACACACACATATACATACACACACGCACACACACACATATG chr4 - 94230402 66904847 66904846 66904909 27325494 27325493 27325556 63 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACG ......:...::.........:.........:...:x..x::x..x.:::.:...xx....:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 68825787 NA +3272 chr4 + 190214555 135766596 135766595 135766660 65 CAGGTTACTTATCTCCACCTGAAACCACCTCCACATTTTACCAAAATCAGCATTTTGGTCAAAGC chr4 - 94230402 6604346 6604345 6604410 87625993 87625992 87626057 65 CAGATTTGGTGTCCGCATTTGAAATCACTTCAACATTTTACCAAAAACAGTATTTTTAACAAAGC ...:..xxx.:..:x..::.....:...:..x..............x...:.....x:x...... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 129162250 61052305 +22003 chr4 + 190214555 135788754 135788753 135789192 439 AAATCTGTATGATTTTTCAGGAGCAAATTTACTTAAGAATAGCAATCAAGACAGTTTGTAGGACAATAAAGACATTAATAACACT--GTTATTGCACACAATATGATTACTTCTCAAGTTTAATGGCATACAATCTTTTTTTTTTTTTTTT---TGGCAGTATGAGGAAATTAGCTCTGTTT-CCTGCCACAATTAGTTGTAAGTCCTTCATTTTCATTTTGTTGGAGACTGAAGGACAAATCAGTGAAAACAGAATCAAGCGCTTGGGTAGTCAGCTATGATTCTTGTCTAGGAGTAATTTATCATGGAAATGGAGCCTGCTTTTTTTTAATGGAAATTTGAAAACTGCTTTCTGCACGATTGAAGCCTTAGTCAGT--AGCCCACCCCAGAGTATGACAAATGTTACTTTTCTCTACAAGATAATAGCAAGACCAGTGTCATAAA chr4 - 94230402 65022780 65022779 65023221 29207182 29207181 29207623 442 AAATCT-TAGGTCTTTCAAGAAATAACCTTACTACAAAGTATCACCTGAGATGCCTTGTAGGACAGTATAGCCATTAATAATTCTTTGTTATTGTATA---TATGATTTATGCTTAACTCTAATGACttttttttttttttttttttttttCCTTGGCACAGTGAGTAAATTAGCTCTGTTTTCCTGGCACAATTAGTTGCAAGTCCTTCATTTTCATTCTGCTGAAAACTGAAGGACAAATCAGTGATAACACAATCAAGCACTTGGGTAGTCAGCTAAGATTCTTGTCTAGGAGCAATTTATCATGTAAATGGTGTATGCTTTGTTTT-ATGGAAATTTGAAAACAGCTTTCTGCATGATTGAAGCCTTTGTCAATGAAAACCCCTTCAAAATGTGACAAATGTTTCTTATCTCTGGGAGGTGCTGAACAGACTTAAATGATAAA ......-..x.x:...:x..:.::..x:.....xx.:.:..x..x:::...::x:..........:..x..x.........:x..--.......:.:.---.......xx.x..:..x.:.....:.x.x:xx.:................---.....xx:....x...............-....x............:..................:..:..:.:....................x....x........:................x................:...........x......x.:x......x....-................x..........:............x....:.--.:x..x.::..:.:.:...........x...x.....:x:..:.:x.::xx....:x:x:.x..... 6M1D78M2I11M3D50M3I28M1I147M1D47M2I67M 341/434 78.6% 442/94230402 0.0% 13/434 3.0% 70765974 NA +17533 chr4 + 190214555 135797183 135797182 135798036 854 AGAAAGTTTTTTTGAATCTTTTCT--AACTTTGCAAGTGATATTTGATTTTACTCCTG--AGGTCATTATAAGTGAAAAGAAAATTGGATGATAGGGTTATGTTTCAGCAATGACAGGTTTTTTCCCCCATGAATTGAAAATTATGG---ACAGGGGCTGCTCAGGCAATTTAATGTTTGTGCCTGAAGTTTATTTCTGATCATCCTTCTTTAGTTTTAAAGCATCCCCAGTGAAAGATTCTTAGAAAATCTTGTTTATAATTTTAGATCCTCTATGCACTCTGAAGTGACATTTGAATACATGAAATATTTTTCATTAACCT---------TGTTCTTTAAAAACATCTAAGTTGTGAGACATTGAACATGTTTTAGAATAAGTTAACCTTAACATATTCCTTAAACTATATGGTAAATATTCAAGTATACTCCCTAAAAAACATT-------TATCTAGA-AATA----CACAGAAGAAAGCAGTCACTAGCTTTACAGTTT-------ACCAGCCATAATTAGATTTGAAAGCTAAAAAAATATTAATTATATTTGATCCATATAGTATAAATAGAATTTCAAAATACAAACAACAAAATCTCAATGTTTATTGTTTTGTTCAATCCCTTATTCAGTTTTAGCTCTTATATTACTTATATGATAGATGCTCTAGGGAAAAATAAAAATATATGTGGTTGAAATCTTCCTG-AGCATATGCTATGGCATTTCAAATGTTCTTATTTCAAATGCAC-----TTTTTAACATGAACAGATAAACCAACAGAAGATGTCTGGAGGAAAATCTAAAATTATATTATAATAGTTCCA-ACTT-TAAGACATGAAAACGGAACCCCCAAAGCCTGATTTATTCAAATGTCACCATGGATTT chr4 - 94230402 65026053 65026052 65026887 29203516 29203515 29204350 835 AGAATTTTTTTCTATACATTTTCTTAAAATTTCCAGCTGATATTTGATTTCTCCCCTCTCAGATTACTACAACTTAAGA---AACTGGGTGAT-GGGTGATGGGTTATCAGAAACAAGGTTTCTGGCTCA--AATTGAAAATAATGGTGGACAAAAGCTGCTCAGGTAATTGAATGTTTATGCCTGCAGCTGTATTTTGCTCATCTTTCATCAGACCAACAACATCTCAAGATAAAACCCCTTAGTGAACCATTTTCATAATTTGGAATCC-ATCTGCACTAAGAAGAAATGGGTATGTGATTGAAATATTTGTCATTAACCTGTATGCTCCTTTTCTGGTAAAATTTCAAGATATTAGAGAAGGGAAAATGCTTTACAATTACTCAGTTATAAAATACCTCTTAG--TATCT-GTAAA-----GAATAGAGTTAGTACATGACATTAAGTCACTGTCTGGAGAATATTACCACAG--------AGTAACTTGTTTTTAATTTCAATTAAAATCAGAGCTAATTAAACCTTTAAG-GAGCAAAATA-CAATGGGTTTTGATCAAAAAGG--TAAACATTATTTT--------------------------TTTTCAGTTTTATTTATTCTTCCACCTAGCTTTATC-CAAACATTACTTATCTGATAGAAGCTCCAGGGGGAAATGAAGATATATATGGCTGAAATCTTTCTGTATCACACATTACAGCAACAC-----TGCTTATTTGAAATGCTCTGCTGTTCTTTACATGAGCAGATAAACTCACTAAAGCTGCCTAAAGCAAATTTTAAATTAACATTA-AATACTTCCACACTCATAAGCAGTGAAAACAG--CCAACAAAGTCTGACTTATTAAAAGGAAAACACTAATTT ....xx.....:.:x.:x......--..x...x..:x.............:x.:...x--..:.:.:..:..x.x..:.---..:...:....-....x...xx.:.x..:x:...:.x...:.xx.:..--..........x....---...:::..........:....x.......:......x..:.xxx..:..x.....:...x.:..x::x.x.:....:.x..xx...:x::.....x:..:.x.x..:.......x::....-x.x......xx....x:.::xx.:x:.:xx..........x..........---------.x....xxx....:x..x.::.xx.::::x.xx...x...:....x...x.x.:.:::x...x...:::....:--...x.-.....-----:.:..x.x.:xx..x.x:.....-------.:...:..-....----.....--------...x...x.:...xx.x..:-------.:...xxx......:.::.xx...-x.:x......-:...x:xx.......x.x.x:.--....:.xx....:--------------------------...x:x.....:..:.x..::::.:::..:....x.-.xx.:.........x.......x....:....::....:..:......:...:.........:...-.x..:.:::..::...x:x.-----.x.......x......x.-----..:..x......:.........:x..x:...x..:..::..x...x.:....x.x.:....-....x.....-...:-....xx:.......:.--..xx.....:....:.....x...x.xx.x..:x:.... 24M2I32M2I19M3D11M1D36M2D15M3I121M1D51M9I74M2D5M1D5M5D23M7I8M1I4M4I5M8D20M7I24M1D10M1D22M2D13M26D36M1D66M1I20M5D18M5I61M1D10M1I4M1I16M2D39M 543/792 68.6% 835/94230402 0.0% 105/792 13.3% 70771130 NA +3271 chr4 + 190214555 135802148 135802147 135802238 91 CCCTTTCTTCTGACAGTTTGTAAATTGGCATATATATATATGTGTGTGTGTGTGTACACACACACA-AACATAT---GAGAGACACGTATTCCAA chr4 - 94230402 88147162 88147161 88147256 6083147 6083146 6083241 95 CCTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAA ..:...:..:.xx:xx...::.x:.x:.x............:...x.....:..::..........-.x.....---.:....x:.:...x:... 66M1I7M3I18M 64/91 70.3% 95/94230402 0.0% 4/91 4.4% 47654986 NA +3139 chr4 + 190214555 135802167 135802166 135802218 52 GTAAATTGGCATATATATATATGTGTGTGTGTGTGTACACACACACAAACAT chr4 - 94230402 30175543 30175542 30175594 64054809 64054808 64054860 52 GTAAATATACATGTATATAAATGTGTGTATGCGTGTAAACACATACAAGTAT ......xx:...:......x........:..:.....x.....:....::.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 105626624 84587931 +3091 chr4 + 190214555 135837870 135837869 135837934 65 TTTTTGTTTCTTTTTCTTTTTTTAGTTTTTTTTTTAGTCTTCTTTTAACTCTGTTTGCCTTTAAA chr4 - 94230402 52563318 52563317 52563382 41667021 41667020 41667085 65 TTTTTGGATTTTTCTTCTTTTTTAGGGTTTTTGTTAGTCTTCCATTAGTATTGTTTACCTCTTAA ......xx.:...:.::........xx.....x.........:x...::x:.....:...:.x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 83274552 NA +3457 chr4 + 190214555 135915446 135915445 135915523 78 CTGCAGCTTCTGACTCCTGGGCCCAAGTGGTTCTCCCGCGTCAGCCTTTCAAATAGCTAGAACTATAGGTATGCACCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCA ..:....::xx::..:.....::......x...x.xx.xx............:.....:......:.x.--....... 69M2D7M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 117718320 72496235 +3185 chr4 + 190214555 135953320 135953319 135953389 70 TGTAAAGGCTTATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398804 33398803 33398873 60831530 60831529 60831599 70 TATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:....x.:x.x..x.x:.:.:::.:.:.:....:.:.......:.x.............x.....x... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 102554516 87660039 +3146 chr4 + 190214555 135953329 135953328 135953387 59 TTATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398815 33398814 33398873 60831530 60831529 60831588 59 TTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...x.x:.:.:::.:.:.:....:.:.......:.:.............x.....x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 102554514 87660041 +3017 chr4 + 190214555 135953330 135953329 135953391 62 TATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398812 33398811 33398873 60831530 60831529 60831591 62 TATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...x..x.x:.:.:::.:.:.:....:.:.......x.x.............x.....x... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 102554518 87660037 +3020 chr4 + 190214555 135953436 135953435 135953489 54 AACCTATATATATGTATATATGTGTGTGTATGTATATATATGTGTGTGTGTGTG chr4 - 94230402 19704273 19704272 19704326 74526077 74526076 74526130 54 AATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..:...x...:..:....::.:.:.:.x.:.....:.x:............... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 116249163 73965392 +3425 chr4 + 190214555 135953450 135953449 135953543 94 TATATATGTGTGTGTATGTATATATATGTGTGTGTGTGTGTGTGTGTGTGGAGATATATATATATATATATGTT-------TTTTTTTTGAGATGGAGTCT chr4 - 94230402 57691380 57691379 57691480 36538923 36538922 36539023 101 TATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAAGTTT ....:x..:x:x:...x..::...:...:x.......:..:x........x.x..x....:x...x.....x..-------x.......:.x...:...:. 74M7I20M 66/94 70.2% 101/94230402 0.0% 7/94 7.4% 78262070 NA +3022 chr4 + 190214555 135953458 135953457 135953508 51 TGTGTGTATGTATATATATGTGTGTGTGTGTGTGTGTGTGTGGAGATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x........:.:........:....x.x.......x.x...... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 87863961 NA +3106 chr4 + 190214555 135953465 135953464 135953506 42 ATGTATATATATGTGTGTGTGTGTGTGTGTGTGTGGAGATAT chr4 - 94230402 49342318 49342317 49342359 44888044 44888043 44888085 42 ATGTTTATATATGTGCGTGTGCATGTGTGTATGTGAAGATAT ....x..........:.....::.......:....:...... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 86611147 NA +3158 chr4 + 190214555 135981187 135981186 135981253 67 CTACAGCCTTAACCTCACGGGCTCAAGCAATCCTCCCACCTCAACCTCTTGAGTAGCTGGAACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ........:x..x..:x:...:.....::x.:.x.xx:x....:...:.::................ 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 117784061 72430494 +3002 chr4 + 190214555 135983343 135983342 135983396 54 TGAGGGAATTTTCTTTTTCTTTTTTTTCTTTCTTTTTTTTTTTCTTTCTTTTTT chr4 - 94230402 53202563 53202562 53202616 41027787 41027786 41027840 54 TAGGTGAATGTCTTTCTCCTTTTTCTCCTTTTTTTTTTTTCCTCATTCTTTTTT .::.x....x.::..:.:......:.:....:........::..x......... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 82780780 NA +3026 chr4 + 190214555 135983347 135983346 135983397 51 GGAATTTTCTTTTTCTTTTTTTTCTTTCTTTTTTTTTTTCTTTCTTTTTTT chr4 - 94230402 60688296 60688295 60688346 33542057 33542056 33542107 51 GGAATCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCCTTT .....:..:.....:.......:..:....:.:...:::.x.....::... 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 75295051 NA +3090 chr4 + 190214555 135983360 135983359 135983427 68 TCTTTTTTTTCTTTCTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGTTGAGATGGAGTCTT chr4 - 94230402 49339959 49339958 49340026 44890377 44890376 44890444 68 TTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAGGTATT .:.:.....xx.x.x...:.::..:...:...:.:.............::....x..:.x.::..x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 86643401 NA +3015 chr4 + 190214555 135983380 135983379 135983417 38 TTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGTTGAG chr4 - 94230402 61429770 61429769 61429807 32800596 32800595 32800633 38 TTTTTTCTTTCTTTTTTCTTTTTTTCTCCTTTGTTGAG .................:.......:.::......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 74553610 NA +4672 chr4 + 190214555 135993150 135993149 135993361 212 CCCTTCTTTTCTTTTCTTTTCTTTCTTTCCTTCTTTCGTTCCTTCCTTCTTT--CTTTCCTTCTTTTTCTTTCTTTTTTCTTTTTCTCTT--TCTTTCTTTCT-TTTTTCTTTCT-CTCATTCTTTCTTTCCTTCTCTCTT-TCTTTCTTATTTTAGGTATTTCAAATCTTTCTTTCTTATTTTAGGTTTTGCAAAGATAATGTGCACACAAACTTTTA chr4 - 94230402 45185597 45185596 45185794 49044609 49044608 49044806 198 CCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGGTAATTCAA---------TATTACCTAAGGTTGTGCAAA------------AGAAACTTTTA ....::.::.xx.:..xx..:.:.x:...x.......x..:...:.x.:...--.:..:.......:.:.xx..:..::....:..x...--.x:....:x..-:..x.......-x:..::.:.xx.:..:.x:...:..-.....xx.x.........x.....---------.x...::.x.....x......------------.x......... 52M2I36M2I11M1I11M1I25M1I24M9D21M12D11M 133/191 69.6% 198/94230402 0.0% 28/191 14.7% 90807553 NA +3882 chr4 + 190214555 135993153 135993152 135993269 117 TTCTTTTCTTTTCTTTTCTTTCTTTCCTTCTTTCGTTCCTTCCTTCTTTCTTTCCTTCTTTTTCTTTCTTTTTTCTTTTTCTC-----TTTCTTTCTTTCTTTTTTCTTTCTCTCATTCTTT chr4 - 94230402 28866445 28866444 28866566 65363837 65363836 65363958 122 TTCTGTTCTGTTGGCTGCTTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACCTTGATGTTTTTCATTTCTT ....x....x..xx:.x...:..x..x..:......::......:xx...:..:..x:x...:..:.:..::..x.......:-----.:::.:......x::..xx.x.:.:.....::.. 83M5I34M 76/117 65.0% 122/94230402 0.0% 5/117 4.3% 107126708 83087847 +3532 chr4 + 190214555 136019860 136019859 136020039 180 CAGGAGGC--TGAGGCAGGAGAATGGCGTGAACCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCAAGGCACTGCACTCCAGCCTGGGCAACAGTGCAAGACT-----TCGGGAAAAAAAAAAAAAAAGAAAGAAACGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAGAAAGAAAGAAAAAAAC chr4 - 94230402 32361462 32361461 32361621 61868782 61868781 61868941 160 CAGAAGGCAGTGAAGCAGGAAAGTGAAATGGATAAGGAG-----------AGAAAACAGAAATAAGAGTA----------------GCAAGAGAACTACACTGAGTCTGGAGAAAAAAAAAAAACAGGTAAGAGAATAAAGAGATGAAGCAGCAATAAGTGAGAACCAAAGAAAAAATGCAATAAAC ...:....--...:......:.:..:x:..:.:x.....-----------..x:.:.x..:..x.::.:.----------------....x..x:.x.x...-----.x.:.............x.:.x....:.xx.....:.x:...x.:x:.x...x:....xx.:.....:..x.x..x.... 8M2I29M11D20M16D16M5I80M 104/153 68.0% 160/94230402 0.0% 34/153 22.2% 103658398 86556157 +3340 chr4 + 190214555 136019963 136019962 136020058 96 GGAAAAAAAAAAAAAAAGAAAGAAACGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAGAGAAAGAAAGAAAAAAACTGCCAAACAGTAAGAAACT chr4 - 94230402 24148062 24148061 24148157 70082246 70082245 70082341 96 GGCAAAAAAAAAAGAAAAAAAGAGGCTAAATATAGGGAAAAAAAACAAACATGGGCTAAGCTCAGAAAGAACAAAAAAATGAAACAGTACAAAACT ..x..........:...:.....::.x...x.x..::.:....:.x..:x.x.::xx.::xxx........x....xx::x........x:..... 96M 63/96 65.6% 96/94230402 0.0% 0/96 0.0% 111871901 78342654 +3263 chr4 + 190214555 136151336 136151335 136151383 48 CTCAAAAACAAACAAACAAACAAACAAACAAACAACAAAAACAACAAA chr4 - 94230402 20093813 20093812 20093860 74136543 74136542 74136590 48 CCTGAAAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAA .:::....................x..x.x........x......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 116057523 74157032 +3213 chr4 + 190214555 136181013 136181012 136181069 57 AAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAATAAAACAGTGTATGAGGGGAAT chr4 - 94230402 67348255 67348254 67348311 26882092 26882091 26882148 57 AAAAAATAAAAATAAACAAAAGAAAGAAAAAAGAATAGTACTGTGTGTGAGGAAAAT ......x.....x...x....:......:..::....:x..x....:.....::... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 68832758 NA +3143 chr4 + 190214555 136181014 136181013 136181056 43 AAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAATAAAACAGT chr4 - 94230402 91846564 91846563 91846606 2383797 2383796 2383839 43 AAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGT ...::..............x...........:..:..:..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 44334450 NA +3052 chr4 + 190214555 136193714 136193713 136193771 58 ATGTAGTCATTACTCATCCTTTTTTTTTTTTTTTTTAAGTCGGAGTCTCGCACTGTTA chr4 - 94230402 81230383 81230382 81230440 12999963 12999962 13000020 58 ATGCAGCCATTACACAACATAACTTTTTTTTTTTTTAAATAGGAGTTTCACATTGATA ...:..:......x..x.x.xx:...............:.x.....:..:..:..x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 54963331 NA +3535 chr4 + 190214555 136197826 136197825 136197894 69 TGTGTGTATATATATACACACACAAACATACATATATAAGTGTGTTTGTGTGTGTGTGTATATATATAT chr4 - 94230402 71630135 71630134 71630203 22600200 22600199 22600268 69 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGT .::...:..::...............:........x.xx..:..:x.....x..::...:x....:.:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 64567691 NA +3075 chr4 + 190214555 136197836 136197835 136197900 65 TATATACACACACAAACATACATATATAAGTGTGTTTGTGTGTGTGTGTATATATATATACACAA chr4 - 94230402 37363040 37363039 37363104 56867299 56867298 56867363 65 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAA .:.:....:..x::x.:......::.:..:.:.:..x....:.:.......:...x:.:...... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 98834796 91379759 +3491 chr4 + 190214555 136197854 136197853 136197916 63 TACATATATAAGTGTGTTTGTGTGTGTGTGTATATATATATACACAAACATACCTATAGTCAT chr4 - 94230402 32959572 32959571 32959634 61270769 61270768 61270831 63 TACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT ...x....:.x.x....:.....::...:.......:.....:.....:...:::..:..::. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 103238282 86976273 +3099 chr4 + 190214555 136272473 136272472 136272558 86 ATGTACAATATATACACATATCTATCAAATATATCCATATATACACATATATAATATATATCAAATATGTTCACATATATTTATAT chr4 - 94230402 67302821 67302820 67302906 26927497 26927496 26927582 86 ATCTGCAGTGGCCATACGTGCCTGTTTTATATATCTGTGTGTGCATATCTATCTTATGTGCCAAATATATTCATTTATGTATATAT ..x.:..:.:xx:.:..:.::..:.:xx.......::.:.:.:..:..x...xx...:.::.......:....:x...:.x..... 86M 54/86 62.8% 86/94230402 0.0% 0/86 0.0% 68969652 NA +3437 chr4 + 190214555 136313018 136313017 136313176 159 AGGCTATTGTTTTATATACATACACATATATATGCATATATACACATA--TATACACATATACACATATACACATATATACATATATATACATATATACACGTATATACATATATATACATATATATATACATATATATACTTTTTATTGACAGGTACGTT chr4 - 94230402 73121088 73121087 73121238 21109165 21109164 21109315 151 AAACTGTAATCTCGTGTGCATGCATATTCATA--CACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACG------CCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTT--CAGATACGCT .::..:.x:.:.::.:.:...:..:..x:...--..:.........x.--:..:x::.:....::...x::...::x:..:..:.:x:........x.:...------.x:.:.x.x...:.:..:....x::.x..x.x...x..x..--...:....:. 32M2D14M2I52M6D41M2D10M 93/149 62.4% 151/94230402 0.0% 12/149 8.1% 63191930 NA +3414 chr4 + 190214555 136313024 136313023 136313145 122 TTGTTTTATATACATACACATATATA-TGCATATATACACATATATACACATATACACATATACACATATATACATATATATACATATATACACGTATATACATATATATACATATATATATA chr4 - 94230402 4417311 4417310 4417433 89812970 89812969 89813092 123 TTTTCTTACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATA ..x.:...:..:.x.::x....x.x.-.xx.x..x..x.............:.:.....x:x...:.:::..:x:x:.x.::....:...xx.x.:..x..x.....:.:.:..x...x.... 26M1I96M 78/122 63.9% 123/94230402 0.0% 1/122 0.8% 131895713 58318842 +3087 chr4 + 190214555 136313041 136313040 136313155 115 ACATATATATGCATATATACAC-ATATATACACATATACACATATACACATATATACATATATATACATATATACACGTATATACATATATATACATATATATATACATATATATA chr4 - 94230402 4417318 4417317 4417433 89812970 89812969 89813085 116 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATA ....::x.:.x....x.x..x:-.x..x..x.......:...:.:.....:.x:x.....:::..:x:x:.x.:...:.:...xx.x::..x..x.....:.:...:x...x.... 22M1I93M 72/115 62.6% 116/94230402 0.0% 1/115 0.9% 131895723 58318832 +3210 chr4 + 190214555 136423618 136423617 136423718 101 GAAAGATAGAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858276 36858275 36858376 57372027 57372026 57372127 101 GAAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....x..xx..x:.x.x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 101M 63/101 62.4% 101/94230402 0.0% 0/101 0.0% 99565342 90649213 +3093 chr4 + 190214555 136423672 136423671 136423754 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::...:..:. 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 99565378 90649177 +3204 chr4 + 190214555 136423676 136423675 136423758 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::......:. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 99565382 90649173 +3315 chr4 + 190214555 136423680 136423679 136423762 83 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.::.......:. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 99565386 90649169 +3537 chr4 + 190214555 136423684 136423683 136423767 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........::x..x.:xx..:.:::......:.:x...:.x..::.......... 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 99565390 90649165 +3319 chr4 + 190214555 136430744 136430743 136430814 71 AAAAACCCACAAACTTGGAGAAGCAAAAAGACCAAAGACACACACACACACAAAAAAAAAAAATGAAGAAA chr4 - 94230402 45463077 45463076 45463140 48767263 48767262 48767326 64 AGAAACAAGCAAAC-------AACAACAAAACCAAACACACACACACACGCGAAAAAAAAAAATACAAAAA .:....xx:.....-------.:...x..:......x............:.:............:x.:... 14M7D50M 51/64 79.7% 64/94230402 0.0% 7/64 10.9% 90967667 NA +3410 chr4 + 190214555 136451025 136451024 136451101 77 TATGTGTGTGTGTGTGTATATATATATATATATGCCTTTGAAATATATGTGTATATATAAA--TACACACATATATATA chr4 - 94230402 80748303 80748302 80748381 13482022 13482021 13482100 79 TATGTGTATGGGTGTGCATATATATATTTTTAAGCTTTTAAAATATATATACATGCAAGGAGCTATATACCTGTGTGTA .......:..x.....:..........x.x..x..:...:........:.::..::.x::.--..:.:..x.:.:.:.. 61M2I16M 55/77 71.4% 79/94230402 0.0% 2/77 2.6% 55702722 NA +3702 chr4 + 190214555 136451044 136451043 136451137 94 ATATATATATATATGCCTTTGAAATATATGTGTATATATAAATACACACATATATATACATACATATATAGAGAGAGAGAGAGAGACAGAAAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:.:..::..x:xx:xx.....x:.....x..x..:.:::.:::.:.:......:.:.....:.x.............x.x...x... 94M 62/94 66.0% 94/94230402 0.0% 0/94 0.0% 103052264 87162291 +3829 chr4 + 190214555 136451046 136451045 136451139 94 ATATATATATATGCCTTTGAAATATATGTGTATATATAAATACACACATATATATACATACATATATAGAGAGAGAGAGAGAGACAGAAAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:.:....x:x:::.x:....:x:.:...x..:.x:::::.:.:.:.:..:.:.........x.x.................:.x... 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 103052266 87162289 +3373 chr4 + 190214555 136478524 136478523 136478596 73 CCAGCCCTATTTTAACAGTTTTAATAATATTTTGAGCCTT---TCTTTTTTTTTTTTTTTTTTCTTTAAAGAGGTG chr4 - 94230402 30600202 30600201 30600277 63630126 63630125 63630201 76 CCAGCTCTACATTGAAGCATTAGATAATATTTTAAGTATTTCCTCTTTTTTTTTTTTTTTTTCCTTTCTAGAGCTG .....:...:x..:.x:xx..x:..........:..:x..---...................:....xx....x.. 40M3I33M 56/73 76.7% 76/94230402 0.0% 3/73 4.1% 105878322 84336233 +3107 chr4 + 190214555 136480965 136480964 136481040 76 TGCCAGATGTTCAGAAAGAAGGGGGTAGGGAGGGAGAGAAAGAGACAGGTAAGAAGA-----GAG----------GAGAAAAGGAGGAAGA chr4 - 94230402 20084670 20084669 20084760 74145643 74145642 74145733 91 TGCCGTATGTTCGGAAAGAAGGGGGTGGAGAGGGGGGGAGGGGAGAAGGTTGGAGAATATATGAGTTTTTTCTATAAGAAAAGGAGAGAAA ....:x......:.............:.:.....:.:..::.:::x....x:..::.-----...----------:..........::.:. 57M5I3M10I16M 55/76 72.4% 91/94230402 0.0% 15/76 19.7% 116396295 73818260 +3089 chr4 + 190214555 136506568 136506567 136506609 42 ATACATGTATGTGTGTATATATATATATATATCCTGAATGAA chr4 - 94230402 52579774 52579773 52579815 41650588 41650587 41650629 42 ATACGTGTGTGTGTGTATATATATATATATATGTTTAATGAA ....:...:.......................x:.x...... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 83926794 NA +3144 chr4 + 190214555 136522686 136522685 136522728 43 CAAAAAACAACAACAAAAAAAACCCAACAACAACAAAGCAGAA chr4 - 94230402 26551078 26551077 26551120 67679283 67679282 67679325 43 CAAAAAACAAAAACAAAAAAACCCCCACAACAATAAAACAGAA ..........x..........x...x.......:...:..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 109971608 80242947 +3296 chr4 + 190214555 136581713 136581712 136581831 119 CTTTCTTTCTTCCTTCCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTTGTTCTTTCTTTCTTTCTCACTTTCATTCTT-------TCTTTCCTTTTTTT chr4 - 94230402 34857671 34857670 34857796 59372607 59372606 59372732 126 CCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATT .:..:x..x..:......x.:x..x....:....:x..x:..x.:::...x..x.:x.:..:.:..:.x.:x...x..::...:::.:.:x:.x.::.....x..-------.:.........x.. 105M7I14M 74/119 62.2% 126/94230402 0.0% 7/119 5.9% 101724042 88490513 +3479 chr4 + 190214555 136607609 136607608 136607720 112 AAATCTTAAATCTATTATGATAGCCTTTTCAGGAATATAAATGTGGTTTACTTTTCTTTGGTCTTGATTTTCTA--------TTTCTATTCCACTTTATTTCATATTTTTAATAGTTAAT chr4 - 94230402 30031137 30031136 30031255 64199148 64199147 64199266 119 AAAGTCTCAATCTTTAAAAATA-TCTTTTCAATAATATAAATGTGCCTTATTTTTCCTCTGTTCTGATCTTCTGATCTTGGCTCACTAAACAACtttttttttttttttaaatatctgat ...x::.x.....x.x.x:...-:.......:x............x:...:.....:.:x..::....:....:--------.:x...xx.x.....x...:x.x....x....x:.:.. 22M1D51M8I38M 77/111 69.4% 119/94230402 0.0% 9/111 8.1% 106576472 83638083 +3174 chr4 + 190214555 136619972 136619971 136620043 72 TATATATGTATATGTATATATATATGTATATATATGTATATGTATATATATATGTATATGTATATGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x:....x.::..:..:........:...:.:.:..::xx.....x.:x.......:.:.x...... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 84138736 NA +3115 chr4 + 190214555 136628644 136628643 136628702 59 TTAAATACACACACACACATATACACACACACACACACATATACACACAAACACACACA chr4 - 94230402 90815414 90815413 90815472 3414931 3414930 3414989 59 TTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA ..:x..::......:..xx.:.:......:...x......::.....:..:.....x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 45813230 NA +3040 chr4 + 190214555 136637692 136637691 136637750 59 AAAAACAAAACAAAACAAGCAAACAAAACAAAAACAAAAAAAAAACAAAACAAAACAAA chr4 - 94230402 62774706 62774705 62774764 31455639 31455638 31455697 59 AGAAACAACCAAAAACAAATCGCCAAAAGAAAAACAAAAAAAAACCAAAATAAGCCAAA .:......xxx.......::x:x.....x...............x.....:..:x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 73862986 NA +3031 chr4 + 190214555 136679890 136679889 136679937 48 CAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAACAGC chr4 - 94230402 82145324 82145323 82145371 12085032 12085031 12085079 48 CAGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAAC ...x...::....:......:....:.........::.:x......:. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 54534566 NA +3548 chr4 + 190214555 136697339 136697338 136697469 131 GGCAACAAGAGTGGAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAATAAATAATCTGATGAAAAAATAGGAAAAAGACCTGAATAGGCATTTCTGAAAAGAAGAC chr4 - 94230402 30218040 30218039 30218162 64012241 64012240 64012363 123 GACAATAAGA-CATAACACTGCCTAAAACAAGAAAAAAAAGGGGACAAAGGAAAAAAAGAAAAGCCTAAAAACCAATAGACTATTAACAAGAATGAAAATAGA-------ATGGCTCCCTGAAAAATAAAC .:...:....-::x...x.:::..x...x..:........::::.x...::.......:....:.x......:x....:x..:x.:.x..:.xx.:...x...-------.x.xx.::.......:x.:.. 10M1D92M7D21M 80/123 65.0% 123/94230402 0.0% 8/123 6.5% 106479299 83735256 +3104 chr4 + 190214555 136697343 136697342 136697413 71 ACAAGAGTGGAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAATAA chr4 - 94230402 65532689 65532688 65532759 28697644 28697643 28697714 71 ACAGAGGTAAAAATTATTATCAAATGAGGAAAAAAAGAAAAAAAATAGAAAAAAAAAGAGCATTGAAAAAA ...:::..::..x.:xx.x.....x:.::.......:........x.:.........:.:...x:...x.. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 71164654 NA +3097 chr4 + 190214555 136697372 136697371 136697438 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAATAAAT---AATCTGATGAAAAAATAGGAAAA chr4 - 94230402 35652685 35652684 35652754 58577649 58577648 58577718 70 AAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAAAAAAAAAGA .....x...x..........::........:...::..::....---..:x.....:::...x.::..:. 44M3I23M 49/67 73.1% 70/94230402 0.0% 3/67 4.5% 101044687 89169868 +3076 chr4 + 190214555 136707701 136707700 136707769 69 CTGACATGGCAGCAAGCACTGAGAAATTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAACT chr4 - 94230402 42293049 42293048 42293117 51937286 51937285 51937354 69 CTAATACAGCATGAAACATTTACAGGTTAAAAACTGAAGAAAATAGAAAAAAAAAAAAAAAGGCAATCT ..:.:.::...xx..:..:.x.x.::...:...xx:..:....x.:..............:.....x.. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 94414652 NA +3031 chr4 + 190214555 136732196 136732195 136732246 51 GTAATTTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAAACCAAA chr4 - 94230402 55764169 55764168 55764219 38466184 38466183 38466234 51 GTGGTTTGTGCAAAGCAAGTTAAAAAAAAAAAAAAAAAACCAACAACCAAA ..::...x......:x..:xx..................:...x....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 80968027 NA +3042 chr4 + 190214555 136732210 136732209 136732271 62 AAAAAAAAAAAAAAAAAAAAAAAAATCAAAAACCAAAAAAAAAGAAAAACCTAGGATTTTGT chr4 - 94230402 2725163 2725162 2725224 91505179 91505178 91505240 62 AACAAAAAAAAAAAAACAAAAAAACCCAAAACTCTAAAAAACAAAAGAAGATGAGATCCTGT ..x.............x.......x:.....x:.x......x.:..:..xx.::...::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 134007047 56207508 +3183 chr4 + 190214555 136732815 136732814 136732875 61 CAGAGGGAGACTTCCTCTCAAAAAAAAAAAAAAAAAATAGGATTCATTTTTATACATTGAT chr4 - 94230402 17580757 17580756 17580817 76649586 76649585 76649646 61 CAGAAAGAGAATTCCACTTAAAAAAAAAAAAAGAAAAAAGCATACATTTCCACAAATAGGT ....::....x....x..:.............:....x..x..x.....::.:.x..x.:. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 119152058 71062497 +3131 chr4 + 190214555 136747069 136747068 136747136 68 AGAACCTGAAAAAAACAAAAACAAAATAAAACAAAAACACACAAACAA---------ACAAACAAAAAACCTGGATG chr4 - 94230402 10856132 10856131 10856208 83374195 83374194 83374271 77 AGAAGGAGAGAACAACAATAACAAAACAAAACAAAAACAAACAAACAAATACCACAGATAAATCAAAGAACTGGCTG ....xxx..:..x.....x.......:............x........---------.:...:x...:.x....x.. 48M9I20M 54/68 79.4% 77/94230402 0.0% 9/68 13.2% 125890937 64323618 +3040 chr4 + 190214555 136754049 136754048 136754108 60 TTTTTACATATATGTGTATTTGAATACATGTATGTGTGTATATATTTATATATAATATAT chr4 - 94230402 13065328 13065327 13065387 81165016 81165015 81165075 60 TCTTTATATACATATAAATTAGAATACATATATATTTGTATATATTACTTTATGCTATAT .:....:...:..:.:x...x........:...:.x..........xx.x...:x..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 123688721 66525834 +3348 chr4 + 190214555 136758517 136758516 136758591 75 CAGAAAGTGCTGACAATTTTGTTTTTTATTTATTTATTTGTTTATTTATTTATTTATTTATTTTTGAGGCAGGAC chr4 - 94230402 55097030 55097029 55097104 39133299 39133298 39133373 75 CAAAAAGTGGTGAGGTTTTAGTGTATGTTGTTTTTGTTTGTTTGTTTATTTATTTAATTCTATTTGAGCCAAGAC ..:......x...x:x...x..x.x.xx.x.x...:.......:............x..x.x......x..:... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 81661487 NA +3087 chr4 + 190214555 136763747 136763746 136763800 54 ATCTTGCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTAACATTCCACA chr4 - 94230402 6346150 6346149 6346203 87884200 87884199 87884253 54 ACCTTGTTTTCTCTCTCCTTTTTTTTCTTCTGTTTTTTACTTTAGCAATGAACA .:....:.:.................:..:.x......x:....:..x.xx... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 130417597 59796958 +3087 chr4 + 190214555 136763747 136763746 136763800 54 ATCTTGCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTAACATTCCACA chr4 - 94230402 6331999 6331998 6332052 87898351 87898350 87898404 54 ACCTTGTTTTCTCTCTCCTTTTTTTTCTTCTGTTTTTTACTTTAGCAATGAACA .:....:.:.................:..:.x......x:....:..x.xx... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 130431748 59782807 +3115 chr4 + 190214555 136785572 136785571 136785651 80 CCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTTTTCTTCCTTCCTTTTCCTTCCTTCCTCCCTTTTCCTTCCTCCCTTT chr4 - 94230402 92729620 92729619 92729699 1500704 1500703 1500783 80 CCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTT .....x:x:.x::..:.x....:::::.....x...:..:.:.....::...:x....:....:::x....:..:.::.. 80M 49/80 61.2% 80/94230402 0.0% 0/80 0.0% 44055952 NA +3098 chr4 + 190214555 136790110 136790109 136790169 60 ACAAGAAAAAAAGGAAAAAGTGAGTTCATTTTAAAGAAAATCAAGTAGGAAACAGATTAT chr4 - 94230402 22106717 22106716 22106776 72123627 72123626 72123686 60 ACAGCAAGCAAAGGGAAAAATGAGCTCATCTGAGAGGTAGTCAAGTAGGGCAAAGATTAT ...:x..:x.....:....:....:....:.x.:..:x.:.........:x.x....... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 114683393 75531162 +3072 chr4 + 190214555 136795050 136795049 136795106 57 AATAATCAGATATAGAAGGGTGTATTTTTTCCACTTTCAAGTCAAAATGAGAAATAT chr4 - 94230402 70100630 70100629 70100686 24129717 24129716 24129773 57 AATGAACAGAAATAGAAGGGTGTTTTTTTCATGATTAGAAGTCAAGATGAGAAATGT ...:.x....x............x.....:x::x..xx.......:.........:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 66694420 NA +3386 chr4 + 190214555 136813408 136813407 136813461 54 TCAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAATCACTTTTAGAAAATAATG chr4 - 94230402 68194440 68194439 68194493 26035910 26035909 26035963 54 TTAAAAAAAAAAAAAAGAAAGAAAGGAAAAGACCATCACCTCCAGGAAATGCTG .:..............:.......:.......xx.....:.::..:....:x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 68618968 NA +3104 chr4 + 190214555 136837375 136837374 136837438 64 TTTTAAGACTTGGATTTTTTGTTTGTTTGTTTGTTTTTTTGAGACGGAGTCTCACTCTGTCACC chr4 - 94230402 3569706 3569705 3569768 90660635 90660634 90660697 63 TTTTAAGTATTGGGTTTTTTGTTTGTTTGTTTGTTTATATGGGTTAGAGT-TCATTATGCAATC .......xx....:......................x.x..:.x::....-...:.x..:x.:. 50M1D13M 49/63 77.8% 63/94230402 0.0% 1/63 1.6% 133267669 56946886 +3230 chr4 + 190214555 136842580 136842579 136842651 72 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTTTCCTGCCTCAGCCTCTCAAGTAGCTGGCATTATAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...........::x..:x.xx.x........:............x.:..:.x.:.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 118645454 71569101 +3022 chr4 + 190214555 136887302 136887301 136887351 50 CTTCATAATAGAGACCCTAAAACAAACAAACAAACAAAACAAAACAAAAG chr4 - 94230402 8698515 8698514 8698564 85531839 85531838 85531888 50 CTTTACAGCAAATACCTTAAAACAAACAAACAAACAAAACATTATGAAAG ...:.:.::.:.x...:........................xx.::.... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 128188787 62025768 +3609 chr4 + 190214555 136927687 136927686 136927746 60 CTCCTGGGTTCAAGCAATTCTCCTGTGTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCA chr4 - 94230402 18197139 18197138 18197198 76033205 76033204 76033264 60 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:...........::x...x.xx.xx.......:............:......x..... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 118730548 71484007 +3068 chr4 + 190214555 137034614 137034613 137034667 54 AAAGGGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAG chr4 - 94230402 39567123 39567122 39567176 54663227 54663226 54663280 54 AAAGGGAAATTATGGCCAAGAAAAAGAAAAAGAAAGAAAAGGAAAAAGGAACAG .......:.:.x..x.:x.:.....:.....:...:....:......:...x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 97467491 92747064 +3022 chr4 + 190214555 137034636 137034635 137034698 63 AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAGAACAACAAACACTGGTCTCTACTT chr4 - 94230402 65532710 65532709 65532772 28697631 28697630 28697693 63 AAATGAGGAAAAAAAGAAAAAAAATAGAAAAAAAAAGAGCATTGAAAAAACTGTTTTATACTT ...x:.::.......:...:....x......:.......x.:x:x...x....x.:.x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 71501926 NA +3604 chr4 + 190214555 137036542 137036541 137036624 83 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.::........:.x...x.xx.x........:............:.:....x....--:....::.. 72M2D9M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 118839416 71375139 +3268 chr4 + 190214555 137048107 137048106 137048200 94 TAGCAGAGGAAGGAAAACAAAACAAACAAACAAACAAAAACAAACAAACAAAAAAAACGCCAGACCTTCTTTCCTAGCTACAAGTCTCCCCAAA chr4 - 94230402 11261209 11261208 11261296 82969107 82969106 82969194 88 TAGCACAAAAGGGGGAAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAGG------CTTCTGGGATGACTATAAGGTTTCCTAAA .....x.::.:..::..x....x:..xx.:x.....................x....x.------.....xxxx.::...:...x:.:..:... 59M6D29M 62/88 70.5% 88/94230402 0.0% 6/88 6.8% 125786898 64427657 +3140 chr4 + 190214555 137067461 137067460 137067509 49 TTATTTTTGTACATTGATTTTGTATCCTGAAAATTTACTGAAGTCATGT chr4 - 94230402 24260494 24260493 24260542 69969861 69969860 69969909 49 TTGTTTTTGCACAGTGATTTTGCTAACTGAAAATTTTCTGAAGTCATGT ..:......:...x........:xxx..........x............ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 112806967 77407588 +3885 chr4 + 190214555 137100185 137100184 137100264 80 CTGCAACCTCCGACTCCTGGGTTCAAACGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCGTGTGCCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACT ..:..:..:xx::..:..........::.x...x.xx.x.........:...........:.:....--....::..... 67M2D11M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% 118903059 71311496 +3611 chr4 + 190214555 137125500 137125499 137125572 73 GTAGGTAGTATTATTAATAACTTCATTTTAAAGGTGAAAAAACTGAGGCAGATAAAGCTTAATAAATTTTCTC chr4 - 94230402 10729186 10729185 10729256 83501147 83501146 83501217 71 GTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCC .......--....:..x:.:..:.......x.....::............x...x..x....xx.....x.:. 7M2D64M 56/71 78.9% 71/94230402 0.0% 2/71 2.8% 126396314 63818241 +3344 chr4 + 190214555 137144099 137144098 137144181 83 CTTGGC-TCAT----TGCAACCTCCGTCTCCCAGGTTGAAGCAATTCTCGTGCCTCAGCCTCCCCAGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197112 18197111 18197199 76033204 76033203 76033291 88 CTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......-....----.:..:..:xx:x..:.::....x...::x...x.:x.x........::.x................x...... 6M1I4M4I73M 61/83 73.5% 88/94230402 0.0% 5/83 6.0% 118946987 71267568 +3065 chr4 + 190214555 137164833 137164832 137164878 46 TAAATATATATATTTATATAAATATATATATTTATATAAATATATA chr4 - 94230402 23671319 23671318 23671364 70559039 70559038 70559084 46 TAAATGTAAATATTTGTATAAATATATATGTTTGTATAAAAAGATA .....:..x......:.............:...:......x.x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 113493514 76721041 +3308 chr4 + 190214555 137167329 137167328 137167401 73 TCTTTTTCTTCTTTA-AGATATATATATATATACACACACACACATATATACACATATATACATATGTATATAC chr4 - 94230402 7596401 7596400 7596474 86633929 86633928 86634002 74 TCTTCATCTTCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ....:x.....:x..-....::...:.x..:..:.:......:...:......x.:......x..:.:.:::.. 15M1I58M 52/73 71.2% 74/94230402 0.0% 1/73 1.4% 129570928 60643627 +3165 chr4 + 190214555 137168565 137168564 137168722 158 ACATATATGTGTATATACACGTGTG---------TGTATACACATACACATATATATGTATATATGTGTATATATACATATATGTATACATGTGTATATATACATATATGTATACACATAATATACATGTGTATATATAC---------ATATATGTATATACATAATATACATAA chr4 - 94230402 4417318 4417317 4417493 89812910 89812909 89813085 176 ACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACAACACACAGAA ....::x...x:...x.x..x..x.---------.:........:.....:.x:x.::..:::...x.x:.x.::....:...xx.x:...x.:x.....:......x.:.x..:.:::x.:.x...:xx::.....x..---------x.x:...:x.:.::.:..:.:...x.. 25M9I106M9I27M 95/158 60.1% 176/94230402 0.0% 18/158 11.4% 132751247 57463308 +3212 chr4 + 190214555 137168576 137168575 137168643 68 TATATACACGTGTGTGTATACACATACACATATATATGTATATATGTGTATATATACAT-----ATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:.:....:::x...:......:::...x......xx..:...........:...x..:-----......... 59M5I9M 51/68 75.0% 73/94230402 0.0% 5/68 7.4% 99805536 90409019 +3058 chr4 + 190214555 137168824 137168823 137168891 68 ATACATATGTATACATATGTATATACATATACGCATATATACACATATAGGTATATATGTATATACAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .....x...:.....x...........:.::.:::....:.x.......xx..:::.:.:.:::x... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 129572411 60642144 +3969 chr4 + 190214555 137168827 137168826 137168957 131 CATATGTATACATATGTATATACATATACGCATATATACACATATAGGTATATATGTATATACATATATGTATATATACCTATATGTATATATACACATATAGGTATATATACATATGTATATATACCTAT chr4 - 94230402 73121100 73121099 73121224 21109179 21109178 21109303 125 CGTGTGCATGCATATTCATACACATATACACAG------AAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .:.:..:..:.....x:...:........:..x------.x::..::...:...:.....x::.:.::x......:.:xx..:..:..x...::.x..:.x..::.:.:..::...x.:.x..x.x.:... 33M6D92M 78/125 62.4% 125/94230402 0.0% 6/125 4.8% 64047727 NA +3049 chr4 + 190214555 137168851 137168850 137168916 66 TATACGCATATATACACATATAGGTATATATGTATATACATATATGTATATATACCTATATGTATA chr4 - 94230402 6864199 6864198 6864264 87366139 87366138 87366204 66 TGCACACATGTACACGTGTATAGGTCTCTTTCTCTAAGTATATATGTATTTATATCTATTTGTATA .::..:...:..:..:::.......x.x.x.x.x..x::..........x....:....x...... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 130304652 59909903 +3280 chr4 + 190214555 137168859 137168858 137168919 61 TATATACACATATAGGTATATATGTATATACATATATGTATATATACCTATATGTATATAT chr4 - 94230402 30441814 30441813 30441874 63788529 63788528 63788589 61 TATATATACACACAGGTATATTTGTTTATGTATATATGTATGACTAATTCTAAGTATATAT ......:...:.:........x...x...::..........:xx..x:.x..x........ 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 106727045 83487510 +3148 chr4 + 190214555 137182278 137182277 137182316 39 TGTGTGTGTGTGTGTGTCACAGAGAGAGAGAGAGAGGGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA .................x.x.................:. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 118199963 72014592 +3411 chr4 + 190214555 137192803 137192802 137192911 109 TTGGGTGACAGAGCAAGGCAGAAAGAAAAGAAAAGAAAAGGAAAGAGGAGAAAAGAGGAGAAGAGAAGAGAGAAAAGAAAAGAAAGAAAATAAAAGGAAAAAAGAAAAG chr4 - 94230402 24820143 24820142 24820246 69410157 69410156 69410260 104 TTGAAAAACAGAGCTGG--AGGAAGAAAACAAACATAAAAGAAAATGCTTTGAAAGGCAGAAGAGAAGAATGAAGACTAAGGAAAAAAAATAAA---AAAGTGGAAAAG ...::x:.......x:.--..:.......x...x:x...:....:x.xxxx:..::.x...........:x...:.xx..:....:........---...:x:...... 17M2D75M3D12M 72/104 69.2% 104/94230402 0.0% 5/104 4.8% 112372660 77841895 +3359 chr4 + 190214555 137192841 137192840 137192920 80 AGGAAAGAGGAGAAAA---------GAGGAGAAGAGAAGAGAGAAAAGAAAAGAAAGAAAATAAAAGGAAAAAAGAAAAGAAAAAGAAC chr4 - 94230402 94016282 94016281 94016370 214033 214032 214121 89 AGGAGAGAGAAGTAAGCAGATGGCTGAAGAGGAGAGATGTGGCCAAGATAATGGAAGATGACAAAGGAAAAAAAGAAAAGAAAAAAAAC ....:....:..x..:---------..:...:.....x.x.:xx..::x..x.:....x:.:...:.:.................:... 16M9I64M 58/80 72.5% 89/94230402 0.0% 9/80 11.2% 43176559 NA +3129 chr4 + 190214555 137192844 137192843 137192918 75 AAAGAGGAGAAAAGAGGAGAAGAGAAGAGAGAAAAGAAAAGAAAGAAAATAAAAGGAAAAAAGAAAAGAAAAAGA chr4 - 94230402 8252855 8252854 8252929 85977474 85977473 85977548 75 AAAGAGCACAAAAAATGGGAAGTGGTTAGAAAAAAAATGTTAAAAAGAGTAAAAAGAAAAGAAACAATAAAAAGA ......x.x....:.x.:....x.:xx...:....:.x:xx...:.:.:.....:.....:.:.x..x....... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 128939989 61274566 +3003 chr4 + 190214555 137247087 137247086 137247135 49 CTCTTTTTCTCTCTTCCTTTCCCTCTCTCTCTTTCTACTCTCTCTCTCT chr4 - 94230402 78374923 78374922 78374971 15855432 15855431 15855480 49 CCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTCTCT .:.......x:....:.:.x:...:.::........x............ 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 58872164 NA +3330 chr4 + 190214555 137249973 137249972 137250029 57 ATATGTATATAGGGGTATATATATGTGTGTGTATATATATATACATATACATATATA chr4 - 94230402 81401317 81401316 81401373 12829030 12829029 12829086 57 ATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....:..:.........:..:..x........:....x..:.x.....:x..:..:. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 55848656 NA +3044 chr4 + 190214555 137267788 137267787 137267857 70 ATTTCATTTGTGCAATATTGGTCATCATATATTTGTTTTTTTTTTCATATTAGGTAAAGGAGACGATATC chr4 - 94230402 63226473 63226472 63226542 31003861 31003860 31003930 70 ATTCCATTTTTGAAATTTTGGTCATCTTTTTTTTTTCTTTTTTTTTTTACAAGGAAAGATAGATAACATC ...:.....x..x...x.........x.x.x...x.:........:x..:x...x..::x...::.:... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 74041315 NA +3155 chr4 + 190214555 137274212 137274211 137274265 54 GTTTTTTTCTGTTTGTTTGTTTGTTTTATTTTGTTGTCTGTTTGGGTTTTTTTT chr4 - 94230402 7956586 7956585 7956639 86273764 86273763 86273817 54 GTTCGTTTTCTTTTGTTTGGTTGGTCTTTTTTGTTGTTGGTTTGGGTTTTTTTT ...:x...::x........x...x.:.x.........:x............... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 129317626 60896929 +3117 chr4 + 190214555 137274986 137274985 137275050 65 TGAAAACAATTTTTAAAAACATATATATATATACACACACATATATATACACATATATGTACATA chr4 - 94230402 66528042 66528041 66528106 27702297 27702296 27702361 65 TAAGATCAATTTCTAGGAATATATATATATATACACACACACTTGGGAATATATGTATATTCCTA .:.:.x......:..::..:.....................:x.:x:x.:.:..:...:.x.x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 70746944 NA +3038 chr4 + 190214555 137275027 137275026 137275091 65 TATATATACACATATATGTACATATATACACATATATATGTACACACACACACACACGTGTGTGT chr4 - 94230402 48167040 48167039 48167104 46063299 46063298 46063363 65 TATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .......xxx..........:...x.:.:....:x.:....:.x..:.....:::..:::...:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 89107987 NA +3029 chr4 + 190214555 137275040 137275039 137275118 79 ATATGTACATATATACACATATATATGTACACACACACACACACGTGTGTGTTTCACAAGTCTTCAGTCTGCATGTTTG chr4 - 94230402 45271688 45271687 45271757 48958646 48958645 48958715 70 ATATCTATATATACACACATATATATGTATACAAACACACA---------GTGCAGCTAGTTTCAAGCATGTGTGCTTG ....x..:.....:...............:...x.......---------..x:x:.x...:.:x..:x..::..:... 41M9D29M 52/70 74.3% 70/94230402 0.0% 9/70 12.9% 92003352 NA +3335 chr4 + 190214555 137290619 137290618 137290693 75 TTCATATATGTGTGTGTGTATGT-------------GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982594 70982593 70982681 23247722 23247721 23247809 88 TTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .........:.:.x.:.x:....-------------..........:........:....:.x:...x..:.:.:.::...:.:.:.. 23M13I52M 55/75 73.3% 88/94230402 0.0% 13/75 17.3% 66308025 NA +3094 chr4 + 190214555 137290625 137290624 137290685 61 TATGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .:...::x.:.::...x....x.....::...:.......:.......:.x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 104331057 85883498 +3127 chr4 + 190214555 137290638 137290637 137290678 41 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.......................:..:. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 47469357 NA +3008 chr4 + 190214555 137335713 137335712 137335762 50 CTCTGTCTCAAAAAAAAACAAAAAAAAACAAAAAAACTAAAACAAAAAAA chr4 - 94230402 60416056 60416055 60416105 33814298 33814297 33814347 50 CCCTGTTCCAAAACAAAACAAACAAACAAAAAAAACCTAAAAAAAAAAAA .:....::.....x........x...x.x......x......x....... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 76919657 NA +3623 chr4 + 190214555 137335723 137335722 137335815 93 AAAAAAAACAAAAAAAAACAAAAAAACTAAAACAAAAAAAATACAAACAAAAAAAAACCATACAAACAAAAAAAATCTTCAAAGCTCAATAAG chr4 - 94230402 82008665 82008664 82008755 12221648 12221647 12221738 91 AAAAAAAAAAAAAGAGGGGAAAAAGTCCAAAACACAACAAAAACAAACAAAACAAACCCAGAATTATGAAAAGAA--TTTAAAAGTCAAGAAG ........x....:.:::x.....:x.:......x..x...x..........x...x...x.xxx.::....:..--..:...:x....x... 75M2D16M 66/91 72.5% 91/94230402 0.0% 2/91 2.2% 55327058 NA +3466 chr4 + 190214555 137337645 137337644 137337723 79 CTGAAGCCCCAAACTCCTGGGTTCAAGTGATCCTCCCACCTGAGCCTCCTGAGTAGCTAGGAATACAAGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:x.....x..:..:.............x.:.x.xx:x..x.....::::.......:.:.x....--.:........ 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 119140519 71074036 +3161 chr4 + 190214555 137394144 137394143 137394194 51 TAACTGTTGGGTTTTTTTTGGTTTTTTTTTTTGTTGTTTTTTTTTAGTTTT chr4 - 94230402 92205775 92205774 92205825 2024578 2024577 2024628 51 TAACTGCTAGGCTTTTCTTGGTTTGGTTTGTTGTTGTTTTGTTTTGATTTT ......:.:..:....:.......xx...x..........x....::.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 45188369 NA +3114 chr4 + 190214555 137395404 137395403 137395482 79 TATGTATATACGTATATAT----GTATATATTTGTGTGTATATATGTATATATTTATGTGTGTGTGTGTGTGTGTGTATATAC chr4 - 94230402 73418583 73418582 73418665 20811738 20811737 20811820 83 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTAAGAACATGC .:.::......:.......----..........x.........xx:..x.x.....xx.:...x.x.x.....:x.x.:..:. 19M4I60M 58/79 73.4% 83/94230402 0.0% 4/79 5.1% 63976821 NA +3244 chr4 + 190214555 137395405 137395404 137395469 65 ATGTATATACGTATATATGTATATATTTGTGTGTATATATGTATATATTTATGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGT------------ATGTTCATGTGTGTGTGTGTG ..x..x....:......:..............------------..:..:............... 32M12D21M 47/53 88.7% 53/94230402 0.0% 12/53 22.6% 117691131 72523424 +3150 chr4 + 190214555 137395429 137395428 137395498 70 ATTTGTGTGTATATATGTATATATTTATGTGTGTGTGTGTGTGTGTGTATATACGTATATATATATACAT chr4 - 94230402 32959555 32959554 32959624 61270779 61270778 61270848 70 ATTTTGCTGCAGCTGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATAT ....xxx..:.xx.:....:x...x:...x....x.....::...:........:......:.x...:.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 104435874 85778681 +3062 chr4 + 190214555 137395439 137395438 137395487 49 ATATATGTATATATTTATGTGTGTGTGTGTGTGTGTGTATATACGTATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::.:......x....:x....................x:.::.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 132989016 57225539 +3566 chr4 + 190214555 137420421 137420420 137420509 89 AAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAGTAAAAGAAAATACCCTAGCAGTGAGCCGAGATCGCA-CCACTGCACTCCAG chr4 - 94230402 56710768 56710767 56710857 37519546 37519545 37519635 90 AAACAACAACAAAAGAAGAAGAAAAAAAGCAAACAAAAATCAACAAAAATACCCTTAAAATAAGACAAAGTTCCATTCACTGTGCCTCAG ...x..x.:x.......:...........x...x....:.x..x:..........x:x.:.:..x.:.::.:x..-:.....::.::... 75M1I14M 62/89 69.7% 90/94230402 0.0% 1/89 1.1% 80709653 NA +3296 chr4 + 190214555 137446820 137446819 137446902 83 CTGCAACCTCCGCCTCCCAGGTTCAAGAGATTGTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCACATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx:x..:.::........x.x..xx.xx.x.........:...........:......x.::..--....::.. 73M2D8M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 119249694 70964861 +3055 chr4 + 190214555 137488177 137488176 137488229 53 CCATTTTAAGTTTTTGTTCTTGTGTTGTTTTGTTTTGCTTTTGTTTTGTTTTT chr4 - 94230402 71439630 71439629 71439682 22790721 22790720 22790773 53 CTATTTCAGGCTTTTGTTCTTTTGTGGGTTTTTTTTGTTTGTTTTTTGTTTTT .:....:.:.:..........x...x.x...x.....:..x.x.......... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 66048547 NA +3637 chr4 + 190214555 137521597 137521596 137521685 89 ATGTTACTCCTATAATCAGAAGAC--------GGTGAGGGCAGTG----GTGGCATCCAGCACTGGTCAGAGTGTCCCAGGACCCTGCACTCCTCCGTGCA chr4 - 94230402 88949083 88949082 88949183 5281220 5281219 5281320 101 ACGTTCCTGCTGTGCTCGGGGGACTTGGTGCGGCTGGGGACAGCGCTGCGGGGCATCCAGCACCGGTCCGAGTGGCCCAGGATGCGGCATTCTTCCCTGCA .:...x..x..:.:x..:.::...--------.x..:..:...:.----.x............:....x.....x.......:x.x...:..:...x.... 24M8I13M4I52M 66/89 74.2% 101/94230402 0.0% 12/89 13.5% 48572514 NA +4523 chr4 + 190214555 137528560 137528559 137528654 95 ATCATAATCACTGTCTCCTGCCTCACTGTCACCACGGCCACTGTCTTTCAAGCTAAATTTGTCCATGTCTTGAAGGGCATATCTGGAAAGATAAA chr4 - 94230402 66237974 66237973 66238068 27992335 27992334 27992429 95 ATCATGATCACTGTCTCCTTGCTCACTGTCTCCATGACCACTGTCCTTAGAGCTTACTATGTCTGCTTCCTGGAATGCAGAACTAGACACAGAAA .....:.............xx.........x...:.:........:..x:....x.x.x....:::x..:..:.:x...x.x..:..x.x.x... 95M 69/95 72.6% 95/94230402 0.0% 0/95 0.0% 71290586 NA +16610 chr4 + 190214555 137529878 137529877 137531562 1685 CCTGCAGTTATAGGATCTAGTGTCTTTCTTCTCGCGGTTACACCTAGTTGCAAATAGCACCATAATAACCAGCAACACTGCACAAATTGCTCCTAAGGAAATAATTATTATCATGGAGACATCCAAGGATGCC-TGGCTTACTGAAGTCATTGCTGTACTTGTCACCGACTCTGCATATTCAAAGATCATGCACTTCAGAAGGACTTTGGTATGTAGCTGAGGATTGCCTTTGTCCTGAATGATAACTGACAGCTCCCATTCTGTGTAGGGAACAGAATCCATGCTAACGTTGGTATGGATGTC-ACATGATCGTGGATCAATTATGAAGATATTCTCCTCATTACCTGCTACTATGGCGCAGCTGAGTTCAGCATTCACACCAGAGTCTCTGTCAATTGCCCTTATTCTTGTGACATGAAAGCCACTTTCAGCCCCTTTGGGAATGGTGATTTCTGCCGTATTATTACGCAATGCAGGCCCTATAACCACAGGAACGTTGTCATTTTCGTCAATGATGGTGAGCACAACTGTGGTATTGCTTACCAGTTGCTTCGGGCTTCCTCCATCTCTTGC------TTCTACCACAAAAG---TGATCTGACTCACTTCTTCATGATCAAAGATTCTGAGGGCATAGATGGCTCCATTAGATGGGTCAATGGTTACATATGT--AGTTATGGAACTTCCTAGAATAAAACTCTCCAAGATGGTGTATGTCACTTGCCCATTTTCTCCAAGATCAGGATCTGTGGCTGTAACAGTGGTGATATATGCCCCTGGTGAGTTATTTTCTGAAATTACAAATTCATATCGGCTTCTCTGGAAGTGGGGTGGATTGTCATTGATATCATTGATTTGAACTGTAAAATGTTTCAC----TGTAGAGAGACTGGGTGTCCCCCTGTCCTCAGCGATTACAGTCAAACTATACTCAGATCTCTTTTCTCTATCCAGTGTGGCATTAGTTAAGATTAAATAATTGTTTTCATATGTCTTCTGAAGTTTAAAGTGACCATGTCCATGAAGCTTACAAACTATTTCTCCATTCAGCCCAGAATCCTTGTCCTGAACTCTGACCAAAGCAACAAATGTATCAATAGGA-----TCCCCTTCAAAAATATAAGATATTTCTTCTTTTCCAGGGGACATGAGGTTGATGTTAATTTCAGGTTTATTGTCATTAACATCCACAACCTTAATTATAATTTTGCAATGGGCTGGGATTGAATTTGGACCCAAATCTTGAGCCTGAACATCAATCTCATAGGATTTGGTGATTTCATAATC--------CACTTGCTTGAAAAGAGTCAAATGTCCTCTTTCAGAATCAATTTTAAAAGTCTCCATAATTTTGGGAGACACATGACTGCTGAAGGAATATACAATTTTCCCATTAGCGCCCTCATCTGGATCCGTGGCATTCAGATCTAAGAGCAAAGTGCCAACCGGGGAGTTTTCTAAGAGTTGTATTATATAAGATTGCTGCTCAAAAGCAGGGCTGTTGTCATTGGAGTCTGAAATGCTTATTTTTAGTATGGATGAGCCAGACCTCTGAGGTACTCCCATGTCTGAGGCAGTGAGCTGAAGCTCGTAGCTTGACTTCAGCTCCCGATCTAACTCTCTGACCACTATGAGTTCTGCATACTTGGCTCCATCAGTCCTGGTCCGAACCTCGATATTAAAAAAATCATTGGCAGAGA chr4 - 94230402 88997876 88997875 88999521 5230882 5230881 5232527 1646 CCTGCAGTTATAGGTCCTGATTTCCTTGTTATCCCTTTTGCACTTTACTGCCACGAAGATCATGGTGACAAAAAGAATGGCCGCAATAGACCCCAGGGCAATAATGAAAATCAGGGAGAGGTTAACAGATCCTATGGACTCCTG--GGCATC-CAGGGCTGGGGACAGGTATATCAAAATCAAGG-----------CAGAGGCCGACAGGGATGTT--------TTTCCATGGTCGTGAGCCACCACGATCAGCTCGTAGGCTGTCTTGGCATTCTCCCCAAAGGCTCTGGTGGTCCTTATCTCTCCATTGACCTGGTCTATCTCAAAAAATCCTCT----GTCTCCTTCCACCATTTCATAGGAAAGCCTGCCATTTTCACCCTCGTCATAGTCATCTGCCTTGACCACTGTCACCAAGTAGCCAACCCCTGCGTTCCGGGGGATGTACACCTCCGCGGTCCCATTGACCAACGGTGGGGCTGTGATCACCGGCGTGTTGTCGTTGACATCCAGGACAATCACCCTGACAGTGGCATTGCTCTGCAGAGAG---GGATTGCCCCCATCTTTCGCCAAGACTTTGAACTCAAAGGCCTTGGTCTG---------TTCATGATTGAAGGACCTCAAGGCATAGATATCTCCAGAGTTGGGGTTGATGGAGACATAAGTGAAGACAGGCATGTCCCTGACTTGGGAGGGCACAATCTGGTAGGAGACGCTG--CCATTGAGGCCCAGGTCAGGGTCCCTTGCTGAGACTGAGAGGAGGTAGGCCCCCGGGGTGTTGTTCTCCTGCACGATGACCTGGTAGTAGGGCTTGGAAAAGTGAGGGTGGTTGTCATTCTCATCGGTGATCTTGACAGTGAAGGACTTGGTAGCTTGCAAGGAG----GGGACACCGTTGTCCTTGGCCTGGATGGTGAGGTTGTACTGGTCCCTTTGCTCACGGTCCAGCCGCCCATCCACCAGGATGGTGGAGAAGCTCTCATA---CTCCTGCAGCCGGAAGGGCACGTTGCCCAGCAGCTTGCACTGCACACGTCCATTGGCCCCCGAGTCACGGTCCGAGACCCGCACCAGGGCAATGA-CGTACCCCGGAGGGGCGTTCTCGCTCACCTCCACCAG-------CTCACTGTTGACGGAGAGAAGGTTGATGAGG------GGAGGGTTGTCGTTGGCGTCCTGCACGCTGATGGTCACTTTGCAGTGGGCAGGGATGGAGTTAGGTCCCAAGTCCTTGGCCTGCACATCCAGCTCATATACATGTCCCTCCTCATAGTCGATGGCACCACTGACT--------GTGATGAGGCCACTCTGAGGGTCGATCTGGAAGAGCTCTCGAGCCCGGTCAGAGACATAGCTGTGGAAAGAGTAGAGCACCTGCCCATTGGTGCCCTCATCCGGGTCAGAGGCGTTGAGGCGGATGACTGGTGTGCCCGGTGGGGCATTTTCAGGCACGCTGACAGTGTAGGCCGGCTCCTCGAAGAGTGGGTTGTTGTCATTGGAGTCGATGACGCGGATGCTAAGCTCCACTGTGCCAAAGTTGGGCGGGTCTCCGCCATCCAGCGCCGTGATCACATAACTGTAGTGGGACTGGGTCTCACGGTCCAGGCTCTTCTCTACCACCAGCTCAGCAAAGCGAGAGCCATCTCCCCGCGTCTTGGTGTCCAGCCCAAAGAGGTCGTTGGGGGTGA ..............x:..::.x..:..x..x..x.xx..:...:.x::...x.xx.:x.:...::.:..x.:x.:x.:x..xxx...x.x:..:.:..x......x.xx....x.....x:.:x.x:...x.:-...x:.x...--.x...:-.x.x:..x.xx..x.::x:xx..x.x....:.-----------....:.xxxx:x..x....x--------..x..x.x...x...::x.:x..x:x......x:.xx....x.x..x.x:xxxx:.x.x.x:xx:.x....x:xx..x..-x...x:x.x...x::.x:.xx:..:..x:...----:.:x...x.:..:..xx.::..xx:..::::x....:x....xxx...x:x....x:....:.x.::x:...x..xx::x.....x:::.x..x::::x...:...xxx.::..:..x..x::...:xx...:.xx..xx..:.:.:...x..x::......:..xx.:..x.x..:::.x.x.x::..x....:......:xx...xx:x---..::.x..:......:.:..------..:x.x.x....:.---..:....---------........::...:x:..x.:.........:x.....xx:xxx....::....xx.....x..--..x:.x.x.xx.:...::xx.:::.xxx:x...xx....:x:x.x.:..x--.....xxxx..x..:.....:..:x.x....x:..x.x.:x..x:..x.....:..x.x...:..:..:x:x.:x.::.x:.x:..x::.xx::.xx::.....:..xx.:........xx:...:x....:.x:..x..:..:x::..x::----..:.::...----..x::x..x:......::..xxxx.::..x.:::.:....x:xx:..:.x:..x.x:.....:xxxx...:x:::.:...x:x:x.:xx.:.:.....---..:...x..::x:...x.xx.:.xx..xx.x.....:..xxx:.:x:x......x:x...x..:..x:x....x::..:.xx....::....::.-:...:.xxx::.:-----..:.x:...xxxx:.:x..-------:..x:.x::::x...x.x:.........xx:------..xxx:.....:..::.:...xxx..x:.:..x:.x.:......:.....x.....x..:..x..x.....:..:.x:.....x.....x.x......x:xx.xxx:xx::.....:..--------....x:..--------..x.x:x.x..x..:.x..::..:..:.x:..::x...:xx.::::x.xx...x....::...:x...:..:..x.xx.::.x......:.:.........:..:..x.x...:..x..::xx.x..x:::x.....x:x:....x:.....x::x.xx:xx.:x:.:..:.x:x...x...:..::xx...:................x:x:.:..xx..x:.x..:x:x:x..x....:.x:.xx.x..xx....xx::..:::x..x....x.xx.x:x::....:xx....xx:x...x..:..:.:x::::.xx.:..:.:x..:..x...x.x:x:.xx.....xx:..xx...:x:::x..x.xx::...:.::..:....x:.x.. 133M1I10M2D6M1D32M11D20M8D80M1I32M4D211M3D20M6I14M3I7M9D63M2I50M2D152M4I9M4D98M3D95M1D13M5I19M7D31M6D119M8I8M8D394M 891/1616 55.1% 1646/94230402 0.0% 99/1616 6.1% 48532002 NA +3052 chr4 + 190214555 137566855 137566854 137566889 35 AACAAAACAAAACAAACAACAACAACAACAACAAA chr4 - 94230402 31015354 31015353 31015388 63215015 63215014 63215049 35 AACAAAACAAAACAAACAACAACAAAAACAACAAA .........................x......... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 106551501 83663054 +3060 chr4 + 190214555 137615282 137615281 137615332 51 AAAACAAAAACAAAAACAAATACAAGTATTAAATGACAAGGTCAATAAAAA chr4 - 94230402 837525 837524 837575 93392828 93392827 93392878 51 AAAACAAACAAGCAAACAAATACAGGTTTTAAATAACAAGGCCAAAAAAGA ........x.x:x...........:..x......:......:...x...:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 136777757 53436798 +3395 chr4 + 190214555 137635550 137635549 137635631 82 AGGAAAAAGAGAAGGAAGAGAAAGAGAAGGAGAGGGAGAGGAAAAAGAAAAAAAGGAGGAAGAGGAGGAGGGAAGGAAGAAG chr4 - 94230402 79555903 79555902 79555984 14674419 14674418 14674500 82 AAGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAGAATGTAAGAAAGAAG .:......xx..:....x:.:::.:x.:............::............::.:.x:xxxx..:.x.x...:...... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 58079647 NA +3440 chr4 + 190214555 137649565 137649564 137649650 86 AAACAATGTCAAGAGAACAACAAC--AACAACAACAACAACAAAAAACAACCCAAAGACTGGGAGGAAATATTTGCAAAAGACATATT chr4 - 94230402 13051442 13051441 13051525 81178878 81178877 81178961 84 AAACTATATCCTTAAAAAAACAAACAAACAACAACAACAACAAAAAACAACGCAAAACCTGAGTGAAAACA----CAAAATGTGTATT ....x..:..xxx.:..x.....x--.........................x....:x...:.x.:...:.----.....x:::.... 24M2I45M4D13M 63/82 76.8% 84/94230402 0.0% 6/82 7.3% 124598123 65616432 +3560 chr4 + 190214555 137667231 137667230 137667301 71 GCCCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCTCAAGTAGCTGGGATTACAAGCATGGGCCACCACG chr4 - 94230402 18197138 18197137 18197206 76033197 76033196 76033265 69 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..::.::..........x...x..x.x........:............:.:....--.:..x:....:::. 55M2D14M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% 119470093 70744462 +3146 chr4 + 190214555 137680479 137680478 137680600 122 AAAAGGGAGGGGGAGAAAGTGAAGGGTCGTGGAAAGCAGTAGCTCAAGAAAAGGAAGAAGGAGAACTAACAAGAGGAAGAATAAGAGGAGAAA-----GGAAG----AAAAAAATACCATTTTACAAAAAA chr4 - 94230402 50099406 50099405 50099536 44130867 44130866 44130997 131 AAAAATGAGAGAAAAAAACTGAAATGTGGTTAAAATTAGCAGCAGAAAGGAGAGAGTAAGAAGGACAGAAAAGAGGTCATATGAGAGCAGAAATAAGTGGAAGCAATCAAGGAATGGTATTTTGTTAAAGA ....:x...:.::.:...x....:x..x..x:...x:..:...xx..:::.::..:x...:..:..x:.x......xx:x..:....x.....-----.....----x..::...:x:.....::x...:. 93M5I5M4I24M 77/122 63.1% 131/94230402 0.0% 9/122 7.4% 87581073 NA +3099 chr4 + 190214555 137730419 137730418 137730481 63 TTTCAGGAAGTCTTTAGTTTTCTTCCTCTTCTTCTGTCTCTCTCTTTTTTTTTTTTTTTTTAA chr4 - 94230402 86443903 86443902 86443965 7786438 7786437 7786500 63 TTTCACAAAGGCTTTGGATGTTTCCTTTTTTTTTTCTGTCTCTCTTTTATTTTTTTTCCTTAA .....x:...x....:.x.x.:.:.:.:..:..:.x.x..........x........::.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 51286516 NA +3273 chr4 + 190214555 137776208 137776207 137776254 47 TTGTTGTTGCTGTTGTTTTGTTTGTTTGTTTTGAAAAGGAGTCTCGC chr4 - 94230402 62241563 62241562 62241609 31988794 31988793 31988840 47 TTGTTGTTGTTGTTGTTTTGTTTGTTTGTTTAAATCAGGAATCTTGC .........:.....................x:.xx....:...:.. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 75534645 NA +3466 chr4 + 190214555 137789929 137789928 137790015 87 TAAATAAAAAAGGAAATTTCGCCCCCCCTCCCCCCCCAAAAAAAAACATGGAAAGCAAATATAGTGAAGACCTTAAGGGACATGAAA chr4 - 94230402 59404604 59404603 59404690 34825713 34825712 34825799 87 TAGGTGAGAAAAAGAATTGCCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAAATATGAAA ..::.:.:...:::....x.x....:..:.................x.x::..::x...x.:.xx:..x:.xx....::.:...... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 78385325 NA +3015 chr4 + 190214555 137827855 137827854 137827973 119 GAAGGGAAGGAAGGGAAGGAAGGGGAAGGGAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAG chr4 - 94230402 1251639 1251638 1251757 92978646 92978645 92978764 119 GAGGTGAAATGAGATGTGAAATGGGAAAATGAGGGAGATGAGAGAAAACACTACCAGGGTGAAGAAGGAAGGGAAGGAAGACAGCAGTAGAGGGAGAGGATGACAAGAGTGGCATGAAG ..:.x...:x:..:x:x.:..x.....::x::....::x:..:...:.x.xx:xx....x.::.................:x::x:.x..:..:..::::x..x:.:..x..x.x.:.. 119M 67/119 56.3% 119/94230402 0.0% 0/119 0.0% 136576216 53638339 +3032 chr4 + 190214555 137827886 137827885 137827953 68 GGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAA chr4 - 94230402 71898280 71898279 71898347 22332056 22332055 22332123 68 GAGGGACGGACAAAAGAAAGGGGAGGGGAGGGGAAGGGAAAGACGGAATTGGAGAACAGAGCATAGAA .:..:.x.:.x::...........:............:.::..x....xx...:::x..:.x.x:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 65929606 NA +3137 chr4 + 190214555 137827913 137827912 137828031 119 GAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAAGGGAAGAAAGGGGAAGGGAG chr4 - 94230402 1251639 1251638 1251757 92978646 92978645 92978764 119 GAGGTGAAATGAGATGTGAAATGGGAAAATGAGGGAGATGAGAGAAAACACTACCAGGGTGAAGAAGGAAGGGAAGGAAGACAGCAGTAGAGGGAGAGGATGACAAGAGTGGCATGAAG ....x...:x:..:x:x.:..x.....::x::....::x:..:...:.x.xx:xx....x.::.................:x::x:.x..:..:..::::x..x:.:..x..x.x.:.. 119M 68/119 57.1% 119/94230402 0.0% 0/119 0.0% 136576274 53638281 +3032 chr4 + 190214555 137827944 137827943 137828011 68 GGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGGAAGGAA chr4 - 94230402 71898280 71898279 71898347 22332056 22332055 22332123 68 GAGGGACGGACAAAAGAAAGGGGAGGGGAGGGGAAGGGAAAGACGGAATTGGAGAACAGAGCATAGAA .:..:.x.:.x::...........:............:.::..x....xx...:::x..:.x.x:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 65929664 NA +3069 chr4 + 190214555 137828001 137828000 137828088 88 AGGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAAGGAAGGGGAAGGGAAGGGA chr4 - 94230402 10424987 10424986 10425074 83805329 83805328 83805416 88 AGGGAGAGAAATGAAAGGTAGAAAAAAAGAAATCAAGGTGTGTCAGAGAGGAAAAGGATGGGAAATGGAGGAATGGGAGTAAAAGGAA ....::..:..x.:...:x..:::..::..::xx....x:x.xx..::...::.....x......x.:.....x....:x::....:. 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% 127403014 62811541 +3043 chr4 + 190214555 137828002 137828001 137828069 68 GGGGAAGGAAGGGAAGAAAGGGGAAGGGAGGGGAAGGAAGGGAAGGAAGGGGAAGGAAGGGAAAGGAA chr4 - 94230402 71898280 71898279 71898347 22332056 22332055 22332123 68 GAGGGACGGACAAAAGAAAGGGGAGGGGAGGGGAAGGGAAAGACGGAATTGGAGAACAGAGCATAGAA .:..:.x.:.x::...........:............:.::..x....xx...:::x..:.x.x:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 65929722 NA +3006 chr4 + 190214555 137828172 137828171 137828217 46 GGAAGGAAGGGGAAGAAAAGGAAGGAAGGGGAAGGAAGGGAAGGAA chr4 - 94230402 73085412 73085411 73085457 21144946 21144945 21144991 46 GGAAGGAAGGGGAAAAAAAAGGGGGAGGGGGAAGAGGAGAAAAGAA ..............:....:.::...:.......::::.:..:... 46M 35/46 76.1% 46/94230402 0.0% 0/46 0.0% 64742760 NA +3097 chr4 + 190214555 137828210 137828209 137828256 47 GGAAGGAAGGGGAAGAAAAGGAAGGAAGGGGAAGGAAGGGAAGGAAA chr4 - 94230402 73085412 73085411 73085458 21144945 21144944 21144991 47 GGAAGGAAGGGGAAAAAAAAGGGGGAGGGGGAAGAGGAGAAAAGAAA ..............:....:.::...:.......::::.:..:.... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 64742798 NA +3132 chr4 + 190214555 137833530 137833529 137833598 69 CAGAATGAGACAGAAAGAAAGAGAGAGAGAAAGAGAGGGAGAGAGAGAAAGAAACACAAAGGAAGGAAG chr4 - 94230402 82145314 82145313 82145380 12085023 12085022 12085089 67 CAAAGTACACCAGTGAGGAGGGGGGAGAGAAAGA--GGGAGAGAGAGGAAGTGAAACAACAGAAGGAAG ..:.:.:x:x...x:..:.:.:.:..........--...........:...x:.x....x:........ 34M2D33M 49/67 73.1% 67/94230402 0.0% 2/67 3.0% 55688216 NA +3178 chr4 + 190214555 137833545 137833544 137833631 87 AGAAAGAGAGAGAGAAAGAGAGGGAGAGAGAGAAAGAAACA-CAAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGA chr4 - 94230402 36858294 36858293 36858376 57372027 57372026 57372109 83 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAG-----GACAGGGACAAGAAAAGAAAAA .....x..xx.:x.....x:...........:.:.:.....-..:xx:....:....:...-----..x..:..x..::.......:. 41M1I19M5D22M 60/82 73.2% 83/94230402 0.0% 6/82 7.3% 100975251 89239304 +4092 chr4 + 190214555 137833581 137833580 137833707 127 AAACACAAAGGAAGGAAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAAAGGAAAGGAAAA----GGAAAGGAAAGGAAAGAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCT--------CAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:.x........:......::::.:......:...xx:x....:.:x:..:.x.--------x:...x.....xx....x.:.....x:::....::..::.....----........:.....x:.:. 56M8D44M4I19M 81/119 68.1% 123/94230402 0.0% 12/119 10.1% 107300417 82914138 +4237 chr4 + 190214555 137833595 137833594 137833745 151 GAAGAAAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGGTAGAGAGAGAGAGAGAAAGAAAGAAAGAAAAGAAAAGAGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAA-AGAAGGAGACAAGAAAATGGGGAG-GTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ......x.:::....:...:.-....:..:.x..::...x.x:...-.x.:.xxxx:.............:.x....:x...x:x....:.x.:::.:.:x..x.x...::x..:x...x::......:.....::.x..x:..:x..:.. 21M1D24M1D104M 94/149 63.1% 149/94230402 0.0% 2/149 1.3% 93779607 NA +3302 chr4 + 190214555 137833670 137833669 137833728 59 AAGAGAAAGGAA-AGGAAAAGGAAAGGAAAGGAAAGAGGGAGGGAGGGAGGAAGGAAGGA chr4 - 94230402 10584961 10584960 10585020 83645383 83645382 83645442 60 AGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGA .:.....:....-x...:x.................:....:::.x.:....:...:... 12M1I47M 46/59 78.0% 60/94230402 0.0% 1/59 1.7% 127248709 62965846 +3338 chr4 + 190214555 137857373 137857372 137857476 104 CACTTTTTTCCTCCTTTTGTTTTCCCTTTCCTTTTTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTCCTTTGGTTTAGAAATAAAGTTTAAGAGCTAATGAAACT chr4 - 94230402 24479666 24479665 24479769 69750634 69750633 69750737 104 CACTTTTTATAATCTTCTGCCTTCATTTCTGTTTTTTTTCTTTCTCTTTTCTCTTTGGTTATGCAAATTCGTTCTCTAGACAGAGCTAAGAAGCTAAAAAGATT ........x:xx:...:..::...x:..::x............:........:...xx..x.x:xxx..:.x.:.xx.:.:.:..:.x.::......x:.:.:. 104M 65/104 62.5% 104/94230402 0.0% 0/104 0.0% 113377707 76836848 +3131 chr4 + 190214555 137887628 137887627 137887722 95 AGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAGAGAAAG--AAAGAGAATGGAAAAAGAGCTG chr4 - 94230402 10903375 10903374 10903471 83326932 83326931 83327028 97 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAATG .....::.........::.x::..:..x.x....:x.:::xx...x......:.:.:....:::.xx......--.....x::..:.x....::x.. 73M2I22M 61/95 64.2% 97/94230402 0.0% 2/95 2.1% 126984253 63230302 +3430 chr4 + 190214555 137944825 137944824 137944917 93 CCTAGTATTGATGGTCTGCAATCTCTTAAGTTATATATATATATATATATATATATATATATATATATACATACATACATACATACACACACA chr4 - 94230402 24136164 24136163 24136255 70094148 70094147 70094239 92 CCTTTTATTTAGGGTTTGTTTTTTCTAGAAT-GTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATA ...xx....x.x...:..:xx.:...x:.:.-:.::........x...:x.xx.:.x......:...........x...x...x.......:. 31M1D61M 65/92 70.7% 92/94230402 0.0% 1/92 1.1% 113808661 76405894 +3253 chr4 + 190214555 137944856 137944855 137944934 79 TATATATATATATATATATATATATATATATATATATACATACATACATACATACACAC----ACACAGGTTAAGGTAAAACC chr4 - 94230402 8395795 8395794 8395877 85834526 85834525 85834608 83 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACC ...:.:.::...x.:..:...x..:....:...::x.....xx.....:...:......----.....::.x..x:x...... 59M4I20M 56/79 70.9% 83/94230402 0.0% 4/79 5.1% 129549061 60665494 +3380 chr4 + 190214555 137944856 137944855 137944919 64 TATATATATATATATATATATATATATATATATATATACATACATACATACATACACACACACA chr4 - 94230402 8395791 8395790 8395854 85834549 85834548 85834612 64 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACA .:.:...:.:.::...x.:..:...x..:....:...:.x.....xx.....:........... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 129549065 60665490 +3112 chr4 + 190214555 137944859 137944858 137944923 65 ATATATATATATATATATATATATATATATATATACATACATACATACATACACACACACAGGTT chr4 - 94230402 24136193 24136192 24136257 70094146 70094145 70094210 65 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATT ..:.::........x...:x.xx.:.x......:.:.........x...x...x.......x:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 113808666 76405889 +3723 chr4 + 190214555 137951923 137951922 137951998 76 GGTGACAGTAAAAGACCCCTGTCAAAAAAAAAAAAAAAAAAAAAAGAGAAGAAAGAAAGAGAGAGGGAAAGGGAGA chr4 - 94230402 37322372 37322371 37322444 56907959 56907958 56908031 73 GGTGAAAG--AAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAG-GAGGAAAGGGTGGA .....x..--...::...:..:......:..............:.....:::....x:...-....:..:..x:.. 8M2D51M1D14M 57/73 78.1% 73/94230402 0.0% 3/73 4.1% 100629551 89585004 +3608 chr4 + 190214555 137951940 137951939 137952038 99 CCTGTCAAAAAAAAAAAAAAAAAAAAAAGAGAAGAAAGAAAGAGAGAG-GGAAAGGGAGAGGGAGAAAGAGAAGAAAAGAAAAAAAAGTTCTACTGTTAC chr4 - 94230402 24662124 24662123 24662223 69568180 69568179 69568279 100 CCAGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAAGTACTGTAGTAAC ..x.:...................:.xx..::x..:::.......x..-...:..:x.:...::....x.:xx..:x..x..::.....x..::x..x.. 48M1I51M 67/99 67.7% 100/94230402 0.0% 1/99 1.0% 113289816 76924739 +3062 chr4 + 190214555 137951956 137951955 137952033 78 AAAAAAAAAAAAGAGAAGAAAGAAAGAGAGAGGGAAAGGGAGAGGGAGAAAGAGAAGAAAA----GAAAAAAAAGTTCTACT chr4 - 94230402 40472546 40472545 40472627 53757776 53757775 53757857 82 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAATTTGGACT ........:...:.:.:....:...::...:...:::...:.:..:xxx.....:x.....----.:..:.:..x..xx... 61M4I17M 53/78 67.9% 82/94230402 0.0% 4/78 5.1% 97479410 92735145 +3434 chr4 + 190214555 137951964 137951963 137952031 68 AAAAGAGAAGAAAGAAAGAGAGA-----GGGAAAGGGAGAGGGAGAAAGAGAAGAAAAGAAAAAAAAGTTCTA chr4 - 94230402 79555896 79555895 79555968 14674435 14674434 14674507 73 AAAATACAAGAAAAATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTA ....x.x......:.xx...:..-----...:x.............:...:.......:......:x.:.:.. 23M5I45M 53/68 77.9% 73/94230402 0.0% 5/68 7.4% 58396068 NA +3047 chr4 + 190214555 137964282 137964281 137964459 178 TGCAAAAATAA--TCCCTGCACTAGCTTTTCAGAGATACAAGTCTGTACCTGATCTTATTCTTATGAATATTGTCTTTCCTTAATTATGTCAAGGAAAGACAAGATTGTACCATTTACTCATTTTAATGTTTTAATTTTAATTTTAGTATTCACAGATGATTCTTTTATATTGTACAAAG chr4 - 94230402 64623209 64623208 64623379 29607024 29607023 29607194 171 TGCAAGAACAAAATCTTAATGCTGGCTT--CAATAACAAAGCCATGAACCCTATCT-------ATGAATATTGAATTTCCTTAGAAATGTTTTGGGGAAAAAAGGTTTTAGTGTTAGTCTATCTTAAATTTCAATCTTTAATTTCAACAAGCGCTACAAGTTCTTATATAACATGTTAAG .....:..:..--..::x:::..:....--..:x:.:.x.:x:x..x...:x....-------..........xx........:xx....:xx..::.:.x...:..x..x::..x::::..:....xx..:x.x:........:.::.xx.:.x:xx::.....x....x::.::x... 11M2I15M2D26M7D117M 100/169 59.2% 171/94230402 0.0% 11/169 6.5% 73341073 NA +3030 chr4 + 190214555 137988168 137988167 137988219 52 CACGCACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652135 26578268 26578267 26578319 52 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ...:.::...x...:...:..xx.:.:.:.:.:................... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 70336084 NA +3405 chr4 + 190214555 137996944 137996943 137997050 107 GAGCATGTTGAAAATGATATTTCATTGAAAGATATTACAATTAATAGTTTATAAAATGTCTACCTTAAATATTAAGACCAATTAAAATTTTGTGAAATATTGATTTT chr4 - 94230402 45830367 45830366 45830468 48399935 48399934 48400036 102 GAGCAATGTGGACTTCATATTCCACTGAAGTATATTAAAGTACACATTTCAGGAAAAGTCCTCCTTCAAAATTAAGAGCAGTTCAAATTT-----AACATCTATTTT .....xxx..:.xx.x.....:..:....:x......x.:.xx.:.x..:.x:...x...:x....x..x.......x..:..x......-----..:..:x..... 90M5D12M 71/102 69.6% 102/94230402 0.0% 5/102 4.9% 92166577 NA +4352 chr4 + 190214555 138014942 138014941 138015058 117 CCATTTATTATAATGGTGCCTGCTGGTGTCCCTGCAGCTAGCAGTCTGTCAGCATTTCCATTAGAAACCCCATTTCACAGGGGCTTAAAATTCAGCTGTAAAATTGTGCTTTAGGCT chr4 - 94230402 33109164 33109163 33109276 61121127 61121126 61121239 113 CTATTTGTTTTAGCAGCAGCCGCTAGCACCGCTGTAGCTAAAGGCCTGTCAGCATTTTCATTAGAAA-TTCATTT--CTGGACTTTATAACTCAGCTGGAAAATT-TACTTTGAACT .:....:..x..:::.::x.:...:.:::.x...:.....:x:.:............:.........-::.....--.x..:x:...x..:.......x......-.:....:::.. 67M1D7M2D28M1D11M 79/113 69.9% 113/94230402 0.0% 4/113 3.5% 104905778 85308777 +4010 chr4 + 190214555 138014948 138014947 138015057 110 ATTATAATGGTGCCTGCTGGTGTCCCTGCAGCTAGCAGTCTGTCAGCATTTCCATTAGAAACCCCATTTCACAGGGGCTTAAAATTCAGCTGTAAAATTGTGCTTTAGGC chr4 - 94230402 85009690 85009689 85009799 9220604 9220603 9220713 110 ATTATAGCAGCACTTACTTGAGCTGCTTTAGTTAAAGCTGTGTCAGCTTTTGCATTAGGATCCCCATTTTTCAAGGGTTTATAACTCAAGCATAAAAATTCACTCTGGGC ......:::.::.:.:..x.x.::x..x:..:..:x:x.x.......x...x......:.x........:x..:...:...x..:...:x::.....x.x::..:.:... 110M 70/110 63.6% 110/94230402 0.0% 0/110 0.0% 53005258 NA +3317 chr4 + 190214555 138057937 138057936 138058010 74 CTGCAACCTCCACCTGCCAGGTTCAAGCAACTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..x.::........::x:..x.xx.x........::::.........:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 119860811 70353744 +3102 chr4 + 190214555 138062207 138062206 138062258 52 CCAGAGCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGTCACTGCCTCTCCCTG chr4 - 94230402 60868537 60868536 60868588 33361815 33361814 33361866 52 CCAGAGCACTCTTTTTTTTTTTTTTTTTTTGTATGGTTGTTGGCTCTTCATG .......x......................x.x.x..:::..x....:.x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 77193670 NA +3127 chr4 + 190214555 138062208 138062207 138062249 42 CAGAGCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGTCACTGC chr4 - 94230402 30172260 30172259 30172301 64058102 64058101 64058143 42 CAGTGTTCTCTTTTTTTTTTTTCTTTCTTTTTTTGGCACTGC ...x.:................:...:........x...... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 107889948 82324607 +8804 chr4 + 190214555 138135695 138135694 138135981 287 GAGCAGAAAA-TGTTAAAGCTATTTGTGAAGGAAAGAGTATGTCACCTAAATTAATGTGGTAGACTCGCCTCATAAGTCATCTCCACCACTCAGCTCTACCACACTGCTGGAAAGAGTAGGGGTCAATATTCTACTCATTTAGAACACACAGGGCCTATTTATCCACTGTGGGAC-TCATATTTCTTCATGTAGTCAGGACACAATAAGACTCAGGTTAAAAACTTCTTTAAGAAATCAATTATTCAAGATACTATATCAGCCATTAAACTTAAACAAATATTTCAAAA chr4 - 94230402 64218013 64218012 64218294 30012109 30012108 30012390 282 GGGCAGAAGAGTGCCTAAGTTATTTTTAAGGGGGAGAGCATGTCATCTAAATTAATACGGAAAAATTGCCTCATAAGTCATCTCCACAGTTGCTCTGCACTACACTGGTGAGAAGACCAGAGTTCAGTCCTGTACTCGTTTTGCAGATGTAGCACTGATTCATCTGTTTTGGATCTTCATGTCGTTTCACACAGACGAGTTGTAACGAGACCCAGATTAAGAA-------GAGGAGCAGCCTAGCTAGACCATTAAACTCACCATTAAATCTCAGCGAACCCTTCAAGA .:......:.-..::x...:.....x.:.:..::....:......:..........::..x.:.x.:....................x::.xxx..x:..:......x..::....x:..:.x...:.x:.x.....:...x.x.x.:::..x:.:x...:...:::.x...:x.-....:.:x:....:::..x.::.x:::..::....:...:....:..-------:..:.::x:x:..x::.::x:.:..x.::x:........::.x.:.:..:x:.....:. 10M1I164M1I47M7D59M 174/280 62.1% 282/94230402 0.0% 9/280 3.2% 73917682 NA +3552 chr4 + 190214555 138147179 138147178 138147286 108 CCAGACCTATTCATAAAGAAAGTTTAG-TTCCTTTAATAGTAACACACATACACACACACACACACGCACACACACACACACACACACACACACATATACATACACACA chr4 - 94230402 89016035 89016034 89016142 5214261 5214260 5214368 108 CCAGGGCTCTCCACGGGGAGAGCTCAGATTCCTGTGGTGCTGGCAGG-ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTA ....:x..x.:..::::..:..:.:..-.....x.::.:x.::..x:-..:::......:x::..:..........::x::.:........::..x..:.......::. 27M1I19M1D61M 67/107 62.6% 108/94230402 0.0% 2/107 1.9% 49131144 NA +3224 chr4 + 190214555 138155309 138155308 138155379 71 CTGCAACCTCTGCCCCCTGGGTTCAAGCAATTCTCTTGGCTCAGCCTCCCTAGTAGCTAGGATTACAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx:x.::...........::x...x.xx..........::.x.......:.:.:....x... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 119958183 70256372 +3456 chr4 + 190214555 138170190 138170189 138170293 104 CATTTGTAAGTTCCA-----CTATATATATATATATATATATAT------AAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964770 14964769 14964884 79265519 79265518 79265633 115 CATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ........x::..x.-----.x.x:.::..x......x.x:.:.------x.x..:.:...x..:.....:::.::.:...:......:.xx:.......::............. 15M5I24M6I65M 71/104 68.3% 115/94230402 0.0% 11/104 10.6% 123205420 67009135 +3117 chr4 + 190214555 138170197 138170196 138170291 95 AAGTTCCACTATATATATATATATATATATATAAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACACACACAC chr4 - 94230402 14964792 14964791 14964884 79265519 79265518 79265611 93 AAGTGCATTTATATAGAGGTGT-TGTGGACACAAATA-TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ....x.xx:......x.x:.:.-.:.:x.:.:...x.-...x..:.....::::::.:...:......:.xx:.:.....::............. 22M1D14M1D57M 62/93 66.7% 93/94230402 0.0% 2/93 2.2% 123205405 67009150 +3497 chr4 + 190214555 138170202 138170201 138170284 83 CCACTATATATATATATATATATATATAAAAA--------GTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 - 94230402 70982590 70982589 70982680 23247723 23247722 23247813 91 CTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA .:.:.x:..........x...x:..:...xxx--------..........:........:....:.x:...x..:.:.:::..:....... 32M8I51M 60/83 72.3% 91/94230402 0.0% 8/83 9.6% 67187612 NA +3000 chr4 + 190214555 138170220 138170219 138170284 65 TATATATATAAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACACACACACACA chr4 - 94230402 30477229 30477228 30477293 63753110 63753109 63753174 65 TATGTACATAAAAATTGCATGTCTGTGTGTCTATATACACACAAATATGTGCATATTTATACCCA ...:..:.......x..::...x.......x......:.:.:.x....:.::.:.:x:.:..x.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 107692991 82521564 +3055 chr4 + 190214555 138170229 138170228 138170272 44 AAAAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATA chr4 - 94230402 89821278 89821277 89821321 4409082 4409081 4409125 44 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ....x........x.x.......:...............:..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 48348951 NA +3147 chr4 + 190214555 138170231 138170230 138170274 44 AAAGTGTGTGTGTGTGTGTGTATATATATATATATATATATACA chr4 - 94230402 89821278 89821277 89821321 4409082 4409081 4409125 44 AAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ...:.........x.x.....:.:...............:.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 48348953 NA +3050 chr4 + 190214555 138170239 138170238 138170313 75 TGTGTGTGTGTGTATATATATATATATATATATACACACACACACACACACACACATACACACACATATATATAT chr4 - 94230402 4481679 4481678 4481753 89748650 89748649 89748724 75 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...:.....x.x:.....x:.:.:.:...:.::...x...:.....:x....:..x:xx...:.:..:..:.:.. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 133688560 56525995 +3294 chr4 + 190214555 138170241 138170240 138170315 75 TGTGTGTGTGTATATATATATATATATATATACACACACACACACACACACACATACACACACATATATATATAT chr4 - 94230402 4481679 4481678 4481753 89748650 89748649 89748724 75 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...:.....x.x:.....x:.:.:.:...:.:....x...:.....:x....:.:x.xx...:....:..:.:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 133688562 56525993 +3104 chr4 + 190214555 138170242 138170241 138170285 44 GTGTGTGTGTATATATATATATATATATATACACACACACACAC chr4 - 94230402 69934569 69934568 69934612 24295791 24295790 24295834 44 gTGTGTATGCATTTAGTTATATACATATATACACACACACACAC ......:..:..x..xx......:.................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 68235673 NA +3060 chr4 + 190214555 138170260 138170259 138170335 76 ATATATATATATACACACACACACACACACACACATACACACACATATATATATATATATAATCTTTTTTTTTTGG chr4 - 94230402 66904847 66904846 66904922 27325481 27325480 27325556 76 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAG ......:..::..........:...........:..x:.x::x..x:.:....:.xx:...xx.x...::.:.::. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 71265413 NA +4292 chr4 + 190214555 138224750 138224749 138224851 102 AGCAAGTTAGAGGAATGGATGGAAAGAAGGAAGGAAGGAAGAAGGAAAAGAAGGAAGGAAGGATGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 84397281 84397280 84397382 9833021 9833020 9833122 102 AACAAATTAGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGAATATGGTaaaaaaaaaaaaaaaaaaagaaaGATGGGAGTAAAG .:...:......:..x.x.:..:...:..::.:x..:.:.:.....:......:......x:xx.x..::..::..::..::..:...:..x..:..x..:. 102M 66/102 64.7% 102/94230402 0.0% 0/102 0.0% 53827469 NA +3072 chr4 + 190214555 138237700 138237699 138237768 69 AATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865450 4865449 4865518 89364885 89364884 89364953 69 AAAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x:..x.x..............x.:x.x...x.x.xx:.........x..x....x..........:. 69M 52/69 75.4% 69/94230402 0.0% 0/69 0.0% 133372250 56842305 +3123 chr4 + 190214555 138237701 138237700 138237752 52 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681932 8681931 8681983 85548420 85548419 85548471 52 ATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..........:...::.:.:.:...:.....xx.:............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 129555769 60658786 +3388 chr4 + 190214555 138237701 138237700 138237754 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 129555771 60658784 +3068 chr4 + 190214555 138237702 138237701 138237757 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 45502354 NA +3282 chr4 + 190214555 138237704 138237703 138237759 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 45502356 NA +3496 chr4 + 190214555 138237706 138237705 138237761 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 45502358 NA +3235 chr4 + 190214555 138237707 138237706 138237767 61 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681943 56681942 56682003 37548400 37548399 37548460 61 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ......x:.:....x:.:...:....:..x:.......x...x...x....x......... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 81555764 NA +3282 chr4 + 190214555 138237708 138237707 138237763 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 45502360 NA +3061 chr4 + 190214555 138237709 138237708 138237768 60 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681943 56681942 56682002 37548401 37548400 37548460 60 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTT ......x:.:....x:.:...:....:..xx.......x...x...x....x........ 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 81555766 NA +3068 chr4 + 190214555 138237710 138237709 138237765 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 45502362 NA +3121 chr4 + 190214555 138237710 138237709 138237763 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 134037436 56177119 +3247 chr4 + 190214555 138243361 138243360 138243417 57 CCCTTCTAACTTTCTCAACCAAGTGTCAAGAAAAAACAAATATGAAAAGAAAAGAAA chr4 - 94230402 10768286 10768285 10768342 83462061 83462060 83462117 57 CTCCTCTAACCTTCCCAAACAAGTAAGAAGAAAAAATGAATAATAAAAAAAAAGAAA .:.:......:...:...x.....:xx.........::....xx....:........ 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 127475075 62739480 +3065 chr4 + 190214555 138266689 138266688 138266751 63 AGAAAGAGCGAGACTCTGCCTC-----AAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGGA chr4 - 94230402 49250022 49250021 49250089 44980314 44980313 44980381 68 AGAAGCAGCAAACATCTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGA ....:x...:.:xx...x.x..-----.........:..........:.:.x:.........:..... 22M5I41M 49/63 77.8% 68/94230402 0.0% 5/63 7.9% 89016667 NA +3012 chr4 + 190214555 138266703 138266702 138266776 74 TCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGGATAGATCTTCTATTTCTCTCCCTCTC chr4 - 94230402 59842632 59842631 59842705 34387698 34387697 34387771 74 TTTACTTTAAAAAAAAAAAGAAAAGAAAAAAAGTAAAGCAGCAGAATAAATTATAACCTATTTTTATTCCTTTC .:.:.:.:...........:....:......::x:...x..x....x:.xxx..xx:......:.x.:...:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 78424071 NA +3036 chr4 + 190214555 138266706 138266705 138266755 50 GCCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGGATAGA chr4 - 94230402 6438506 6438505 6438555 87791848 87791847 87791897 50 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGA .:..:.....:.....::..........:.:..:....:..:::...:.. 50M 37/50 74.0% 50/94230402 0.0% 0/50 0.0% 131828200 58386355 +3132 chr4 + 190214555 138289607 138289606 138289687 81 GAAAAAGACATAGCAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAGTACTGAATAAACACGTTTTTATTATGTTATCA chr4 - 94230402 40370680 40370679 40370760 53859643 53859642 53859723 81 GACAAAGACATATGACATTAAAAAAATAAAAAAGAAAAAGTAATAAGATCTCTAAATACATGAGCTTATTTTCTCTTATTA ..x.........xx.x.xx.......x.............x..x....x:x..:....x.::x.:..x.x..x.x....:. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 97918927 92295628 +3212 chr4 + 190214555 138304587 138304586 138304634 48 GTTGGTTTCATATATATACACACACACACACACACACACACACACATA chr4 - 94230402 66904838 66904837 66904885 27325518 27325517 27325565 48 GCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTA .:..x..........:...::.........:...........:.:x.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 71399749 NA +3302 chr4 + 190214555 138304595 138304594 138304685 91 CATATATATACACACACACACACACACACACACACACATATACACACATAGACATATATGTATATATACCTAAACACGTACATATTTGTAC chr4 - 94230402 89016091 89016090 89016181 5214222 5214221 5214312 91 CATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGC ...x.::..:.........::x::.:........::..x..:..:...::x.x..:.:...::.x.:..:.:x:...::..:x..x:..:. 91M 55/91 60.4% 91/94230402 0.0% 0/91 0.0% 49288504 NA +3030 chr4 + 190214555 138312832 138312831 138312884 53 TCCTTCCTCCCCCTCCTCCTCTTCTTCCTCCCCTTCTTCTTCTTTTCCCCTTT chr4 - 94230402 47089616 47089615 47089668 47140735 47140734 47140787 53 TTCTTCACCCCATTCCTCATCTTCTTCCTCCCCACCTTCTTCTTCGTCGCTTT .:....x:...x:.....x..............x:.........:x:.x.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 91223216 NA +3753 chr4 + 190214555 138329038 138329037 138329240 203 TTGGACTCAGTAGGATACAAAAAGGAAGAGCAAGAGAGT---GAGTGAATAAGAGAGAGAGAGAGAAAGAAAAAAGGAAGAAAGAAAGAGAGAAAGAGG--AAGGAAGGGGAAAGAA-AGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 22272867 22272866 22273068 71957335 71957334 71957536 202 TTGGCCGCATCAAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAG-GAGAGAGAAAAAA------AAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA ....x.x..x:.:..xxx::x.......x.x:.:.:...---..x:xx.:......:....-....:........------......:xxx.:..x.:.--......xx.xx....x-...::..:x:.x:..xx:...:::..:.:.:..x...x.x......:....:.:.x.....::x..::xxx..:..:x....x.xx..... 39M3I19M1D13M6D18M2I16M1I91M 124/196 63.3% 202/94230402 0.0% 13/196 6.6% 116056171 74158384 +3108 chr4 + 190214555 138329057 138329056 138329158 102 AAAAGGAAGAGCAAGAGAGTGAGTGAATAAGAGAGAGAGAGAGAAAGAAAAAAGGAAGAAAGAAAGAGAGAAAGAGGA-----AGGAAGGGGAA--------AGAA-----AGAGAGAAA chr4 - 94230402 44400475 44400474 44400594 49829809 49829808 49829928 120 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA ....::x.:..::x.x.x.....x..:x::.:.:......::.......:...::..........x:.:x...:.x:.-----..:..:x....--------....-----......... 78M5I11M8I4M5I9M 71/102 69.6% 120/94230402 0.0% 18/102 17.6% 93928582 NA +3139 chr4 + 190214555 138329066 138329065 138329215 150 AGCAAGAGAGTGAGTGAATAAGAGAGAGAGAGAGAAAGAAAAAAGGAAGAAAGAAAGAGAGAAAGAGGAAGGAAGGGGAAAGAAAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 42084009 42084008 42084154 52146249 52146248 52146394 146 AGCAAAAGGG--AGT--AGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAA .....:..:.--...--.x...x.::::............:...:::xxx.::.....x.x.x.x:.x:x.x..:.....:::x:x..::.xx..x.:.:::.x.:x.....xx...x:xx.::.:...:.:....:.:.:....:.... 10M2D3M2D133M 86/146 58.9% 146/94230402 0.0% 4/146 2.7% 96245057 93969498 +3382 chr4 + 190214555 138329105 138329104 138329199 95 AAAAAGGAAGAAAGAAAGAGAGAAAGAGGAAGGAAGGGGAAAGAAAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA .:......::..::.....x.....:.x.x.:...x:.::xx...x..:...:.:......:.:.xx...:.:.x.:...x:.x..:x..::... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 127425730 62788825 +3644 chr4 + 190214555 138329143 138329142 138329372 230 GAAAGAAAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAAAAGGGAAAGGGAAAGGAAAGGAATGAAGGGAGGGAGGGAGGAAAGAAAGAAGGGAGGGAGGGAGGAAGGAAGGAAGGGAGGGAAAGAGAGATAAAGAATAAG chr4 - 94230402 72111982 72111981 72112204 22118199 22118198 22118421 223 GAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAA---AGAAGAGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAA----AGAATGTGAGTCCAGGAAGGGAATGGAAGTACTGCCAAACAAAGAGTGAG ..:.::...:.....x:.:.......::.x:x:...x.:x:.x.x.x:.x....x..::.:.::.:x:.xx...x...:.:x.::.:.x:..:...:.:..:.xxx........---....:.:.x.xx.:...x.x.::...:..x:xx.::..:::.x.:x:.x..x.x:.:..----:..:x.x.:.xxx.:.:.:....x...:.x.xx.xx.:.:.....:.:.. 114M3D59M4D50M 123/223 55.2% 223/94230402 0.0% 7/223 3.1% 66217161 NA +3518 chr4 + 190214555 138329152 138329151 138329329 178 AGAGAAAGAGAAAGAGAGA-GAGAGAAAGAGAGAAAGAGAGAAAGAG-AAAGAAAGAAA-------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAA---AAGGGAAAGGGAAAGGAAAGGAAT-----------GAAGGGAGGG-----------------AGGGAGGAAAGAAAGAAGGGAGGGA chr4 - 94230402 4547796 4547795 4548013 89682390 89682389 89682607 218 AGAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATAAATCAACAGAATCAAGTCCCTTGAAAGAGAGGGTGAACAAGATTCCCCCCAAAGAGAAAAAAAAGCAGCAAGGGA .....::x:.:.:x...:.-.xx...x.x...:..x......x...:-.....:.:.x.-------...:..........:::..:..xxx:..::x.....x...::...xx.:.....x..:...x---..::x.:..:x...xx..x:....-----------:...:.....-----------------.::...:...:....x..x:..... 19M1I27M1I11M7I62M3I24M11I10M17I25M 119/178 66.9% 218/94230402 0.0% 40/178 22.5% 133781356 56433199 +3197 chr4 + 190214555 138329167 138329166 138329230 64 GAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237697 9237696 9237760 84992643 84992642 84992706 64 GGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:..x.x..x::.........:x..x::...:.....:....:....:..:...:....::... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 129091470 61123085 +3126 chr4 + 190214555 138329183 138329182 138329267 85 GAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ..:.:.x..xx.:x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..:..:........ 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 101470890 88743665 +3958 chr4 + 190214555 138329192 138329191 138329298 107 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAAAAGGGAAAG----GGAAAGGAAAGGAATGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.::...:.:.-------..:..:x....-----.:.x.....xx....x.:..::.x:.::.:......:....:----........:......:... 35M7I11M5I42M4I19M 77/107 72.0% 123/94230402 0.0% 16/107 15.0% 107796028 82418527 +3004 chr4 + 190214555 138329195 138329194 138329279 85 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAAAAGGGAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ......x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.::.x..::.x.::.....::.... 85M 53/85 62.4% 85/94230402 0.0% 0/85 0.0% 101470902 88743653 +3186 chr4 + 190214555 138329208 138329207 138329291 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAGAAAAAGAAAAAGGGAAAGGGAAAGGAAAGG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx...:.:::..:::::.x.....x.:.:....:...:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 101470914 88743641 +3120 chr4 + 190214555 138337592 138337591 138337629 38 AAAAATAAAACCAAACAACAACAACAACAACAAAAACC chr4 - 94230402 4027226 4027225 4027263 90203140 90203139 90203177 38 AAAAAAAAAACCAAACAACAACAACAACAAAAAAAACC .....x........................x....... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 134310366 55904189 +3232 chr4 + 190214555 138378990 138378989 138379037 48 TAAAATGTAATCATTTGTAGCTTTTGTTGTTGTTGTTGTT--GTTGTTTT chr4 - 94230402 3758524 3758523 3758573 90471830 90471829 90471879 50 TAAAATGTATTTATTTGTAGGTTTTGTTGTTGTTGTTGTTTGTTTGTTTT .........x.:........x...................--x....... 40M2I8M 44/48 91.7% 50/94230402 0.0% 2/48 4.2% 134620466 55594089 +3681 chr4 + 190214555 138410758 138410757 138410847 90 TGGCGCCATCTTGGCTCACTGCAACCCCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ....::...x..------..:..:...xx:x..:.:.........:.x...x.xx.x........:..:.........:.:....x.:.. 12M6D72M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 120213644 70000911 +3170 chr4 + 190214555 138442979 138442978 138443044 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGGAACACTAGCAAGTACTTGATTTTTCTTCTCT chr4 - 94230402 79649032 79649031 79649097 14581306 14581305 14581371 66 AAGGGAAAAAAAAAAAAAAAAAAGGAACAAGTGGAGACACCAGTCCTTACTTGGTTAATCTTCTCT ..:::..................::..x.::x..::....:..:xxx......:..xx........ 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 58793947 NA +3125 chr4 + 190214555 138445548 138445547 138445604 57 AATATATATATATATATATATATATATACACACACACACACACACACACACACACAA chr4 - 94230402 8395807 8395806 8395863 85834540 85834539 85834596 57 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA ..:..:...x..:....:...::x..:.:xx.:.................x...... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 130049741 60164814 +3005 chr4 + 190214555 138445549 138445548 138445601 53 ATATATATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...x..:....:...::x..:..xx.:.................x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 130049739 60164816 +3782 chr4 + 190214555 138447155 138447154 138447238 84 CTGCAGCCTTGACCTCAGGGGGTCAAGTGATCCTCCAGCATCAGCCTCCCAAGTAGCTGGAACTACAGGCACATGCCACTGTGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTGT ..:.....:x:.x..:xx...x.......x.:.x.x:.xx.......::..................x.::..--......... 73M2D9M 61/82 74.4% 82/94230402 0.0% 2/82 2.4% 120250029 69964526 +3010 chr4 + 190214555 138502136 138502135 138502213 78 TTCTTTTCTTTTCTTTGATTTTACTTTCTTTATTTCATTTCTTTTTTATAGTTCTTAATTTTTTTTATTATACTTTAA chr4 - 94230402 36600618 36600617 36600695 57629708 57629707 57629785 78 TTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTATGGGTATTAATTTGCTCTCTGGTGCTTGAA ..:...:..:.:::..xx::..x...::.::x.................:.x.x.......x:.:.x.x:.:...x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 101901518 88313037 +3428 chr4 + 190214555 138566725 138566724 138566798 74 CTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGGCTTCCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::........:.x...x.xx.x.....x...:...........:......x.::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 120369599 69844956 +3589 chr4 + 190214555 138640745 138640744 138640822 78 CTGCAGCCTTGACCTCCAGGGCTCAAGCGATCCTCCCACCTCAGCCTCTCGAGTAGCTGGGACTACAAGCGTGCATCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..:.....:x:.x..:.x...:.....:.x.:.x.xx:x........:..:.........:......--......:.. 67M2D9M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 120443619 69770936 +4708 chr4 + 190214555 138682309 138682308 138682554 246 TAAACAGAAGCATCCACTAAATCAGA--GGAGAAGACAGCCTTAAGATTACTACACAGATTTCTGCCCTCACAAGAACAACCTGACTAA-----AACAAGCAAAAGAGAGAAAGAGAGAAAAAGAGAGAGAGAAAGAAAGAAGAAAGAAAGAAACAAGGAAGGAAGGAAGGAAAGAAGGAAGAAAGAGAAAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAG chr4 - 94230402 46219525 46219524 46219768 48010635 48010634 48010878 244 TATACAGATCAACTCATTAAGGTGGAAGGGAAAAGACA-CCTCATGTTTACTAGACCGCTTTGT-----TGAGTGGACAGAATGATGAAGTATCAGCAGGCAAAAGAAACAGCTAT-GAGAAGGAGACAGAGAATGAAAACAGAGGGAAAGGCACTAGGAAAGTTGGGAAGGGAAAATATGAATTTAGTAAAAAAAAAAATCCACGTGAAGGAGAAAGAC--AAAAAAAATGGAGGTACAGCAGAAAAGAAGG ..x.....xxx.::..:...:x::..--...:......-...:.x.x......x..x.x...x.-----::x:x.:...:xx...:x..-----.:..:........:.x.:xx.x-..:..:....x......x....:x...::.....:x..x.....:.xx..:.:.::.:..x:x::.xxx..x..:....:...xxx.x:x...:........x--....:...x::..:x.x..x.::......:. 26M2I10M1D25M5D20M5I22M1D103M2D31M 150/237 63.3% 244/94230402 0.0% 16/237 6.8% 92462784 NA +4142 chr4 + 190214555 138682457 138682456 138682611 155 AAGGAAGGAAGGAAGGAAAG---AAGGAAGAAAGAGAAAGAAAAGAAA-AAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGCAACAAAAAA chr4 - 94230402 32361465 32361464 32361623 61868780 61868779 61868938 159 AAGGCAGTGAAGCAGGAAAGTGAAATGGATAAGGAGAGAAAACAGAAATAAGAGTAGCAAGAGAACTACACTGAGTCTGGAGAAAAAAAAAAAACAGGTAAGAGAATAAAGAGATGAAGCAGCAATAAGTGAGAACCAAAGAAAAAATGCAATAAACAA ....x..x:.:.x.......---..x.:.x..:....:.:..x.....-....:x..x.......xx.x.xx:.:xxx:..:.:.....:...:x.:.x....:.:x..::.::x:.::x..x..x..:x..:..xx.......:..x....:...x.. 20M3I25M1I110M 99/155 63.9% 159/94230402 0.0% 4/155 2.6% 106320992 83893563 +3058 chr4 + 190214555 138682463 138682462 138682565 103 GGAAGGAAGGAAAGAAGGAAGAAAGAGAAAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 63699089 63699088 63699191 30531212 30531211 30531314 103 GGTGGAAAGAAAGGAAGGAAAAAAGATAGAGGGGACAATAACAGCAGTAAAATCCATGGTAAAAAAATGGGACGAGAAATTACAAGAGAAAGAGAGAAATAGA ..x:.:...:..:.......:.....x.:..:::.x..x..x.:x..x..:.xxx.x::x:....:.x:.:.x..:...xx.x:.:.......:.....x.:. 103M 63/103 61.2% 103/94230402 0.0% 0/103 0.0% 74983374 NA +4371 chr4 + 190214555 138682465 138682464 138682631 167 AAGGAAGGAAAGAAGGAAGAAAGAGAAAGAAAAGAAAAAGAAAAGAAA------------------GAGAAAGAAAGAAAAGAAAGA--AAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGCAACAAAAAAATGCAAGCAACTAACATTTC chr4 - 94230402 44053977 44053976 44054163 50176240 50176239 50176426 187 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAATCCATCTTGCCAGAAACAAACCTTTC ....:.x:x:x....:.x.:.:..............::...x......------------------:............:.x...:.--..x.x......x::..::..x..x.x..:.:x.::x.:.x:..:...:.:.::...:x..x:...x..x..xxxx.xxx...x..x...x...x.... 48M18I21M2I98M 109/167 65.3% 187/94230402 0.0% 20/167 12.0% 94628488 NA +3064 chr4 + 190214555 138682471 138682470 138682548 78 GGAAAGAAGGAAGAAAGAGAAAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAA chr4 - 94230402 16117436 16117435 16117513 78112890 78112889 78112967 78 GGGAAGGAGTAGTAGTAGGATGGGAAAGAAAACTATTAGCAAAGGAAAGGAAGGAGGGAAAGGAAGAAAAATGAAAAA ..:...:..x.:x.:x::..x:.:........xx.xx..x..::.....:...:.::.....:........x:..:.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 122565035 67649520 +3244 chr4 + 190214555 138682475 138682474 138682567 93 AGAAGGAAGAAAGAGAAAGAAAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAA--------AGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 53862996 53862995 53863096 40367307 40367306 40367407 101 AAAAGGGAGAAAGGGAAAGAAAGAAAAGAGAATAGGCAGAAACAGATGCTAAACAGAGAAAGCAGGCAGGTCCCAGAAAAACATCCAGGAGAAAAAAAAAA .:....:......:........::...:....x..:x...:.x...x:xx...x.:......x.::--------.....:.x.xxx..:.::...:...:. 66M8I27M 63/93 67.7% 101/94230402 0.0% 8/93 8.6% 84819479 NA +3582 chr4 + 190214555 138682492 138682491 138682580 89 AGAAAAGAAAAAGAAAAGAAAGAGAAA-GAAAGAAAAGA-----AAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA .....:..:..........x...:...-.x.....x...-----.x......:........:::.xx.......x.:.:.x::x...x:..:... 27M1I11M5I51M 66/89 74.2% 95/94230402 0.0% 6/89 6.7% 127779117 62435438 +3842 chr4 + 190214555 138682495 138682494 138682614 120 AAAGAAAAAGAAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAG-----AAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGCAACAAAAAAATG chr4 - 94230402 44053977 44053976 44054098 50176305 50176304 50176426 122 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAG-AAGACAAAAATGAATACAAAGAACAGAAAGAA--CAATGCAAAAGTG ..:.:.x.x.x:.....x.::::.............:..:.x..:..:.x:.::..:x:.-----:...........-....x.:...x:..x:x......x........--...::x....:.. 60M5I12M1D32M2D13M 81/117 69.2% 122/94230402 0.0% 8/117 6.8% 94628518 NA +3105 chr4 + 190214555 138682514 138682513 138682586 73 AGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAA chr4 - 94230402 7711334 7711333 7711406 86518997 86518996 86519069 73 AGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA .....:xx..:::xx...::x...........:...:.......:..xx:..:x....:..::..::...... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 130971180 59243375 +3098 chr4 + 190214555 138682515 138682514 138682614 100 GAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAGAAAGCAACAAAAAAATG chr4 - 94230402 67445497 67445496 67445596 26784807 26784806 26784906 100 GAAAAAGAGAACATAAAGAAAGAAAGAGAGGAAAGGAGGATAATACAGCTCAGTAGGAGAAATAAAAAAAAATGGAGAAACATTAAGCAGAATAAAACTG ....:.:....x.x...........:...:::..:..:::x..x.x..xxx::x..:.::..x:....:...x.:.:.:.x.xx.....:x.x....x.. 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 71237018 NA +3723 chr4 + 190214555 138682525 138682524 138682596 72 AAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA .....x...x....:..:x..x.:...:x.::..x.::.::.:..:..............x........... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 113615540 76599015 +3101 chr4 + 190214555 138687167 138687166 138687266 100 CCTTCTAACAACAGTGGAAACTAGGTATGATTATCCCTACTTTACAGATGAGAAGCCTGAGTCCAGGACAAGTGTAGTGACTTTTCCAAGGCTACAGAGC chr4 - 94230402 80054212 80054211 80054305 14176098 14176097 14176191 94 CCTTGCAAAAAC-GTGAGAA-----TGCAATAATCCTCATTTCATAGCTGAGAAGCTGGGGTCACACAGTAGCTTAGTGACTTTCCCAAAGATGCAGAGC ....x:..x...-...::..-----.:::..x....::.:..:.:..x........:x.:...xx:x.xx..:x..........:....:.x.:...... 12M1D7M5D75M 64/94 68.1% 94/94230402 0.0% 6/94 6.4% 58632955 NA +3190 chr4 + 190214555 138700122 138700121 138700177 56 TGTCTATATATGTGTGTGTGTGTATATATATATATATATACGTTTAAATTTTTGTA chr4 - 94230402 19559286 19559285 19559340 74671063 74671062 74671117 55 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCT-AATTTTTGTA .:.:.x.x.x.............:.................:x:.-.......... 45M1D10M 46/55 83.6% 55/94230402 0.0% 1/55 1.8% 119140836 71073719 +3024 chr4 + 190214555 138700131 138700130 138700168 38 ATGTGTGTGTGTGTATATATATATATATATACGTTTAA chr4 - 94230402 52579774 52579773 52579811 41650592 41650591 41650629 38 ATACGTGTGTGTGTGTATATATATATATATATGTTTAA ..::..........:................:...... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 86120357 NA +3009 chr4 + 190214555 138748126 138748125 138748166 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAAAAGAAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...........................:...:..x.:x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 51071779 NA +3125 chr4 + 190214555 138748126 138748125 138748161 36 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAAAA chr4 - 94230402 25247412 25247411 25247447 68982956 68982955 68982991 36 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAA ...............................x.... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 113500714 76713841 +3723 chr4 + 190214555 138765390 138765389 138765466 77 CCCTGTGAGCTAGTTACTC-CTATTATCCCTATTTTGTAGATGAGGAAACTGGGGCACAGAGAAGCTAAATATTTTGC chr4 - 94230402 10729177 10729176 10729254 83501149 83501148 83501226 78 CCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGC .........x...x..x.:-....:.x.:.:.....::..:..:.:......:......x.x.:.:...:..x..... 19M1I58M 57/77 74.0% 78/94230402 0.0% 1/77 1.3% 128036213 62178342 +3103 chr4 + 190214555 138765410 138765409 138765460 51 TATTATCCCTATTTTGTAGATGAGGAAACTGGGGCACAGAGAAGCTAAATA chr4 - 94230402 73089450 73089449 73089500 21140903 21140902 21140953 51 TAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATA ..x.:.....:..........x......x..:.......x..:.:x..... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 65675960 NA +3436 chr4 + 190214555 138770555 138770554 138770614 60 ATGAGAAAATGTGTATGTATATGTAAATATATGTGTGTGTACACACACACACATACACAT chr4 - 94230402 25393253 25393252 25393310 68837093 68837092 68837150 58 ATAAAAATGTGTGCATGTGTATGTA--TGTATTTGTGTGTACACACACACACGCACACGT ..:.:..x:....:....:......--.:...x...................::....:. 25M2D33M 47/58 81.0% 58/94230402 0.0% 2/58 3.4% 113377302 76837253 +3451 chr4 + 190214555 138778620 138778619 138778678 59 CTCCCAGGTTCAAGTGATTCTCCTGGCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.::..........x...x.xx..........::...........:.:....x.::. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 120581481 69633074 +3162 chr4 + 190214555 138787248 138787247 138787295 48 AATTGGTTTTTTGTTGTTGATTTTTTGTTTTGTTTTGTTTTGCTTTGC chr4 - 94230402 54656363 54656362 54656410 39573993 39573992 39574040 48 AATAGGTTTTTTGTTGTTGTTTTGTTTGTTTGTTTTGTTTTACTTTAC ...x...............x...x..xx.............:....:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 84130885 NA +3167 chr4 + 190214555 138793634 138793633 138793722 89 AGGAGGGAGGGAGGAAAGAAGAAGGAAGGAAGGAAGGAAAAAAAAGAAAGAGAGAGAAAGATGAAAGAAAGAAAGAAAGAAAAAAGAAG chr4 - 94230402 55334412 55334411 55334495 38895908 38895907 38895991 84 AGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATG-----GGGCATGAGGGAAAAGAGAGG ..:..:.::..::...:x..x.x:x..............:.x.x......::.:.:...:...-----::.x.x..::.....:...:. 63M5D21M 56/84 66.7% 84/94230402 0.0% 5/84 6.0% 83459222 NA +3207 chr4 + 190214555 138793668 138793667 138793736 69 AGGAAAAAAAAGAAAGAGAGAGAAAGATGAAAGAAAGAAAGAAAGAAAAAAGAAGACAGAAAGAAACAA chr4 - 94230402 56332188 56332187 56332256 37898147 37898146 37898215 69 AAGAACAGAATCAAAATAGGAGATAAATGAAAGATAGAAACAAAGAAAAAGAAAAGCAGACAGAAGTAA .:...x.:..xx...:x::....x.:........x.....x.........::..::....x....::.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 82461480 NA +3059 chr4 + 190214555 138793688 138793687 138793811 124 AGAAAGATGAAAGAAAGAAAGAAAGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGGGGAGGGGAAGGGAAAAG chr4 - 94230402 29503818 29503817 29503941 64726462 64726461 64726585 124 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAG .:.....x.:...:..:.:........:x:....::x.:...:....xxx:x..:.::....:.:.x:...x.x...x:.x:.x.::x......:x.xxx:..:xx:x....::x..:.x.... 124M 72/124 58.1% 124/94230402 0.0% 0/124 0.0% 109289870 80924685 +3512 chr4 + 190214555 138793690 138793689 138793803 114 AAAGATGAAAGAAAGAAAGAAAGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGGGGAGGGGAA chr4 - 94230402 62511307 62511306 62511420 31718983 31718982 31719096 114 AAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGAGCAGAA ......:..::...:....:....x.:.:.:x::...xx..x..x...x:....::...:x....:....::x.::.::.x...:xx..x..x..xxx...:::.:...x:... 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% 76282383 NA +3566 chr4 + 190214555 138793692 138793691 138793810 119 AGATGAAAGAAAGAAAGAAAGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAA----AGAAAGAAAGAAAGGAGAAGAGGGGAGGGGAAGGGAAAA chr4 - 94230402 18943159 18943158 18943281 75287122 75287121 75287244 123 AGGAAAAAGGAGGAATTAAAGAAAAATGAAAATACAGTGAGGTGAAGTAAGGAGACGAAAAAGGCAAAATAGAATAAGCACATTAAAATGAGAGGACTGAGAGCAAAGGAAAGGGAAGAAAAA ..:x:....:.:...xx.........x...:.:.x.:x..::::...x...:.:.x....:.::x....x.:.:x...x.----.:..x..:..:.xx....:x.::...::..:.:.:.... 80M4I39M 74/119 62.2% 123/94230402 0.0% 4/119 3.4% 119850533 70364022 +3513 chr4 + 190214555 138793711 138793710 138793794 84 AGAAAAAAGAAGACAGAAAGAAACAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGG chr4 - 94230402 79562499 79562498 79562582 14667821 14667820 14667904 84 AGAGAAATGATTACAGAGGGTATTACAGAACAACATATACAGGAAAAGAAAACAAAAAAAATGAAAGAAAGAAAGGTGAAGAGG ...:...x..xx.....::.x.x:.x....x:.x.x.x.x..:..:.:..:.x.:...:..x..............x....... 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 59231212 NA +3214 chr4 + 190214555 138793742 138793741 138793801 60 GAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGGGGAGGGG chr4 - 94230402 69066688 69066687 69066747 25163656 25163655 25163715 60 GAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGG ..:.::...:..:.............:..x:..x:.:......:.:..:x:....x.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 69727054 NA +3521 chr4 + 190214555 138831734 138831733 138831803 70 CTCTTGGGTTCAAGTGATTCTTCTGTCTCAGCCTTCCAGGCAGCTGGGACTACAAGTTCACACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT--GCACCACTGTG ..::............x...x:xx.x.........:..:.:......:......x..--:......::.. 57M2D11M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 120634595 69579960 +3320 chr4 + 190214555 138833403 138833402 138833505 103 CTCTCTCTCTCTCTCTCTCTCCAGGGAGTAAAGACTGGGTACATTTCTCCCATTCTCTCTCTCTCTCTCTCCTCTCCTCTCTCTCTCTCTCTCTCTC-----TGTCTC chr4 - 94230402 17018318 17018317 17018412 77211991 77211990 77212085 95 CTTTTTGTCTTTCATTCTCATCAGTAA-------------ACTCTTCTCCCATTCTATTCCTCTCTCTCTCCCCTCTCTCCATTTTCTTTCCCTTTCCTATTTGTCTC ..:.:.x...:..x:....x:...x:.-------------..x:............x.::............:...::::.x:.:...:..:..:..-----...... 27M13D57M5I6M 64/90 71.1% 95/94230402 0.0% 18/90 20.0% 121815085 68399470 +3134 chr4 + 190214555 138833445 138833444 138833533 89 ATTTCTCCCATTCTCTCTCTCTCTCTCTCCTCTCCTCTCTCTCTCTCTCTCTCTC-TGTCTCCTTCTCCCTCTCTCCTGCTCTCTCTCCA chr4 - 94230402 17388731 17388730 17388819 76841584 76841583 76841672 89 ATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTC-TCTGAACCCATCCTGCAAGCCCTCCA ..::..::..x...........:..........::.:..:..:::.x...::...-...x.:.-...xxx:.:x......xxx.:..... 55M1I7M1D26M 60/88 68.2% 89/94230402 0.0% 2/88 2.3% 121444714 68769841 +3033 chr4 + 190214555 138869027 138869026 138869087 61 GAGGAGAGAGGAGGGGAGGGGAGGGAAGTGGAGAGAGGAGGGGAGGGAGGAGAGAGGAGAG chr4 - 94230402 92619642 92619641 92619702 1610701 1610700 1610761 61 GGGAATAGGGACGGGATGGGGACGGAGGGAACGAGAGGAGGGATGGGAGGAGGGAGGGGAG .:.:.x..:.:x...:x.....x...:.x::x..........:x........:....:... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 46249385 NA +4335 chr4 + 190214555 138908250 138908249 138908408 159 AAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAGGAAGGAAGGAAGGAAAGAAAAGAAAGAAAGAAAAA-GAAAAGAAAGAAAAGAAAGGAAAG---GAAGGAAAGCAAAGAAAGGAAAGAAGGGAAGGAAGGAAGGAAGGAAAACGCACCTTTCC chr4 - 94230402 44053989 44053988 44054148 50176255 50176254 50176414 160 AAGAATGGAGGAGA-AAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGA--GACAGAAAATCCATCTTGCC .....x.:.:..:.-...:..:......::x..::...x:..:...x:..xxxx:......::..::.:.x.....-...x.x......x......:.x.:---:..:.x::..::.x.......::....::..x.:x..--..x:.....:x..:...x.. 14M1D61M1I24M3I37M2D20M 102/156 65.4% 160/94230402 0.0% 7/156 4.5% 94854261 NA +3249 chr4 + 190214555 138908262 138908261 138908363 102 AAGAAGGAA--GGAAGGAAGGAAAGAAAGAGGAAGGAAGGAAGGAAAGAAAAGAAAGAAAGAAAAAGAAAAGAAAGAAAAGAAAGGAAAGGAAGG-AAAGCAAAG chr4 - 94230402 55334401 55334400 55334505 38895898 38895897 38896002 105 AAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAG ...:..x..--:....::::.::....:x.:x.x:x..........:...:.x.x......:....:....:x::.:x.x..::.:....::...-:.x...... 9M2I84M1I9M 66/102 64.7% 105/94230402 0.0% 3/102 2.9% 83573861 NA +3205 chr4 + 190214555 138953354 138953353 138953410 57 CTCTGTCTCAAAAAACAAACAAACAAACAAAAAAAAAACAAAAAGCTGTTCCTCCAA chr4 - 94230402 71871112 71871111 71871168 22359235 22359234 22359291 57 CTCTGTCTCAAAAAACAAACAAACAAAAAAAGTAAAATCATATTGTTTCTTTTCCAA ...........................x...:x....x..x.xx.:.x:.::..... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 67082242 NA +3207 chr4 + 190214555 138953354 138953353 138953396 43 CTCTGTCTCAAAAAACAAACAAACAAACAAAAAAAAAACAAAA chr4 - 94230402 64558411 64558410 64558453 29671950 29671949 29671992 43 CTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAA ...:x:.:.............................x..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 74394943 NA +3007 chr4 + 190214555 138957595 138957594 138957644 50 ACTGCTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGTGTA chr4 - 94230402 6987283 6987282 6987332 87243071 87243070 87243120 50 ACTGCTGTTGATTCTGTGTGTGTCTGTGCATGTGTGTGCATGCACGTGTA ......::..xx.x.........x....::........::..:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 131970312 58244243 +3530 chr4 + 190214555 138979992 138979991 138980074 83 CTGCAGCCTCGACCTCCTGGGTTCAAGCGATCCTCCTGCCCCAGCCTCTCAAGTATCTGGGATTACAGGTATGAGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:.....:x:.x..:...........:.x.:.x.xx.x.:......:.......x....:.:....x.--..x:....::.. 69M2D12M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 120782866 69431689 +3357 chr4 + 190214555 138983044 138983043 138983152 109 TGATCAATCATCGGAATGAGACTTGTCTCAAAAAACAAAAACAAAACAAAACAAAAAAAGAACAGAAGACAGGGTGCAGTGGCTCATGCCTGTAATTCCAGCACTTTGG chr4 - 94230402 30284235 30284234 30284343 63946060 63946059 63946168 109 TGATGATTCATTGATGTGAATACAGTTAATAAATACAAAAACAAAACAAAACAAAAACAGTGAAAATAACATTGTACTAGAGCTCATGGCTATACATCCATGGCTTAGG ....x.x....:.:x:...:xx:x..:xxx...x.......................x..x:x.:.x:...xx..:.x:x:.......x..:..xx....xx:...x.. 109M 71/109 65.1% 109/94230402 0.0% 0/109 0.0% 108698809 81515746 +3094 chr4 + 190214555 138983066 138983065 138983102 37 TTGTCTCAAAAAACAAAAACAAAACAAAACAAAAAAA chr4 - 94230402 73067596 73067595 73067632 21162771 21162770 21162807 37 TTGTCTTCAAAAACAAAAACAAAACAAAACAAAAAAA ......:x............................. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 65915470 NA +3023 chr4 + 190214555 138991700 138991699 138991775 76 ATATAATTTAAAAATAAATAAATAAAAATAAAATAATAATTATAGGAGTATTCAAATTATCTGAATTGTGATAGTT chr4 - 94230402 20920232 20920231 20920307 73310096 73310095 73310171 76 ATTTAATTTAAAAAGAAATAAGTGAAAAGACAAGATACAGCAGTGGAGTATTTACATTCCCTGGAGGGTGATAGCT ..x...........x......:.:....x.x..x.xxx.x:.xx........:.x...x:...:.xx.......:. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 118071468 72143087 +3187 chr4 + 190214555 139001983 139001982 139002049 67 CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTTTCCTGCCTCGGCCTCTCAAGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:...........::x..:x.xx.x...:....:............:.:.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 120804857 69409698 +3025 chr4 + 190214555 139002197 139002196 139002249 53 ATGCCTGGCCCTGATGCATTTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTT chr4 - 94230402 57721477 57721476 57721529 36508874 36508873 36508926 53 ACACCTGGTTCTGGTGCTTTTCATATGTTTGGTTGTTTTTGGTTTTCTTTTTT .::.....::...:...x...:x.x......x........x.....:...... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 81280720 NA +3859 chr4 + 190214555 139003131 139003130 139003211 81 CTGCAACCTCCAACTTCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTATAGGCGCACGACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:..:..:xx.:....:x........:.x...x.xx.x........::.:.........:....:.x.:....x..::.. 81M 57/81 70.4% 81/94230402 0.0% 0/81 0.0% 120806005 69408550 +3241 chr4 + 190214555 139029967 139029966 139030047 81 CTGCAACCTCTGCCTTCCAGGTTCAAGCGATTCTCATGCCTCAGCCTACTGAGTAGCTGGGATTACAGGGCTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:..:..:xx:x....::........:.x...x..x.x........x:::.........:.:....x.xx::....:::. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 120832841 69381714 +3486 chr4 + 190214555 139034647 139034646 139034725 79 CTGCAGCTTCAAACACCTGGGCTCAAGTGATCCTCCCTCCTCAGCCCCTCAAGAAGCTGGGACTACAGGCATGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:....::x..:.x:.....:.......x.:.x.xxxx.......::.....x......:......--.:...:.... 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 120837521 69377034 +3408 chr4 + 190214555 139088721 139088720 139088787 67 AGGGGGATAAAAGTCCCCCACCTAGGACTTTTTTTTTTTCTTTTTTCTTTTTTCTGAGACAGAGTTT chr4 - 94230402 54371562 54371561 54371628 39858775 39858774 39858841 67 AAGGAAAAGAAAGTCCTCCAAATAAGATTTTTGTTTTGTTGTTTTTTTTTTTTTTCAGACAGAGCTT .:..::.x:.......:...xx..:..:....x....x.:x.....:......:.x........:.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 84717159 NA +3170 chr4 + 190214555 139091870 139091869 139091981 112 GTTGTCAAGAAAATAGAATATACATATTATTTATATATAGAGAATATATATACACACATATATATACACATATATATACACACATATATATACATATATACACTACATATAT chr4 - 94230402 84994935 84994934 84995044 9235359 9235358 9235468 110 GCCGTCACGAAGAGCAAATAGGGGCATC--TAAAGTATAATAAATATAAATACGAGCATTTGTATAGATGCTTATATACACACACACCTAAGCATTTATACAGCACTTACAT .::....x...:.xx:....x:x::..:--.x.x:....:x:......x....:x:...x.:....x.:::x............:.:x..x:...x......x:..x..:.. 28M2D82M 70/110 63.6% 110/94230402 0.0% 2/110 1.8% 54096935 NA +3193 chr4 + 190214555 139091922 139091921 139091997 76 CACACATATATATACACATATATATACACACATATATATACATATATACACTACATATATACATATATACACTATA chr4 - 94230402 60813611 60813610 60813686 33416717 33416716 33416792 76 CGCACATACGTGCAGACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGTATCCATGAACTGTA .:......::.::.x....:.:......x.:.........::.....x..x.::x.:.:.::..x:..:x...:.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 78278311 NA +3197 chr4 + 190214555 139104486 139104485 139104556 71 AAGACACAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAATATAGGAATGTA chr4 - 94230402 6332149 6332148 6332219 87898184 87898183 87898254 71 AAGCCACAGTCAGCCTCAGTGGCCTTAAAAAGAAAAGAAAAAGAAAAGAAAAACAGAATAGTAAGAATGCA ...x......x..x...x..xx.xxx.....:....:...............:x.:..xx:..:.....:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 132772337 57442218 +3101 chr4 + 190214555 139104491 139104490 139104554 64 ACAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAATATAGGAATG chr4 - 94230402 71886265 71886264 71886327 22344076 22344075 22344138 63 ACAAGGAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAAT-TGGAAATG ...:x...x:...:.x...:.........:.............:x..:.x:....-.:.:.... 55M1D8M 48/63 76.2% 63/94230402 0.0% 1/63 1.6% 67218226 NA +3432 chr4 + 190214555 139106698 139106697 139106794 97 TTGATATATATCACAATTTAAAATAGTTTGATAACTATATTTCTTTTTTTTTTTTTTTTTTTTGAGATAGAGTTTCGCTCTTGTTGCCCAGGCTGGA chr4 - 94230402 56835453 56835452 56835545 37394858 37394857 37394950 93 TTAACATACA----AATTTGGAATAGCTAGATATCTATATCTTTTTATTTTATTTTCTGTTTATAATGAAAACTCCGGTCTTTTTATGCAGACTGGA ..:.:...:.----.....::.....:.x....x......:.:...x....x....:.x...xx.:xx.:.::.:..x....x..::x...:..... 10M4D83M 64/93 68.8% 93/94230402 0.0% 4/93 4.3% 82271245 NA +3098 chr4 + 190214555 139120515 139120514 139120587 73 CTGTAACCTCAAACT-CTAATCTCAAAGGATTCTCTGGCCTCAGACTCTCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::.:..:x..:..-..::x:....:x.x...x.x..x.....x..:..........:.:......x...... 15M1I58M 52/73 71.2% 74/94230402 0.0% 1/73 1.4% 120923389 69291166 +3512 chr4 + 190214555 139163932 139163931 139164027 96 AGAGACAGAGGGAGGGGTGA---GAAAGAGAAAAGAAAGAAAGGAAAGGAAAGGAAAGAAAGAAGGAAAGGAAAGGGGCAAGGGCAAGAGAAAGAGAAA chr4 - 94230402 40465768 40465767 40465866 53764537 53764536 53764635 99 AGAGTCTGGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAA ....x.x.::.:....:...---...x........:x...:.:.x....::.::x::.x:x.:...:.:......:..x....:x.:.:....:..x.. 20M3I76M 63/96 65.6% 99/94230402 0.0% 3/96 3.1% 98698164 91516391 +3528 chr4 + 190214555 139164069 139164068 139164135 67 TGAGAGAGAAAGAGGGAGGGAGAGAGGGAGAGAGAGAAAGAGGGAGGAAGGGAGAGAGAGAAAGAGA chr4 - 94230402 27835421 27835420 27835487 66394916 66394915 66394982 67 TGAGAGAAAATGAGGAAGGGAGAAAAACTGAGATAGGAGGATGAAGGAAGGTAGAAATTGAAAGAGA .......:..x....:.......:.::xx....x..:.:..x.:.......x...:.xx........ 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 111328648 78885907 +3565 chr4 + 190214555 139164093 139164092 139164215 123 AGGGAGAGAGAGAAAGAGGGAGGAAGGGAGAGAGAGAAAGAGAAAGAAG--AGAGAGAAAGAAAGA-AAGAAGGAAAAGAAAGAAAGAAAGAGAGGGAGATGAAAAGAAAGAGAAAGCGGGGAGGA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .....:.....x.x.:.x:xx:....:x.:...:.:x.......:....--.x...x.........-...x....:.x:....:..:.x.:...xxx.x.x:..:...x.x:x:...x:.:...:. 49M2I15M1I59M 81/123 65.9% 126/94230402 0.0% 3/123 2.4% 93808681 NA +4076 chr4 + 190214555 139164103 139164102 139164288 186 AGAAAGAGGGAGGAAGGGAGAGAGAG-----------AAAGAGAAAGAAGAGAGAGAAAGAAAGAAAGAAGGAAAA---GAAAGAAAGAAAGAGAGGGAGATGAAAAGAAAGAGAAAGCGGGGAGGAGGGAGGGAGGGAAAGAGATAGAGAAGGAAGGAAGAAAAGAAGGAAG----GGAGGGAGGAAGGAAGGAAGATTTTTT chr4 - 94230402 22272879 22272878 22273075 71957328 71957327 71957524 197 AGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGA-------AAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAAATATTTT ....x::.x:......x.:..:.:..-----------x..........:........-------...:..:.....---.:..x..:xx...::.xx.xx.x..xx....:...x..xx::xx.:..:.:...::....x.:.x.:...:.:....::.::x.....:.x...----.:::..x:...x.xx:...:..x.... 26M11I20M7D12M3I94M4I27M 115/179 64.2% 197/94230402 0.0% 25/179 14.0% 116891224 73323331 +3143 chr4 + 190214555 139164192 139164191 139164253 62 AAAAGAAAGAGAAAGCGGGGAGGAGGGAGGGAGGGAAAGAGATAGAGAAGGAAGGAAGAAAA chr4 - 94230402 37794330 37794329 37794391 56436012 56436011 56436073 62 AAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAAA ....:...:.:....x....:..x...x...:....:.:.:.x.:..::..::..:.:.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 101369862 88844693 +3170 chr4 + 190214555 139174188 139174187 139174264 77 CAGAGCGAGACTCCATCTTAAAAAAAAAAAAAAAAGAAAGAAAGAAAATAGATTTTAAAAAAAAAAGAAATGAAGTA chr4 - 94230402 32280597 32280596 32280667 61949736 61949735 61949806 71 CAAAGTAAAAGTCCACT------AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTA ..:..::.:.x....::------.........................x.::.x:.::...:..x.:::...:.... 17M6D54M 51/71 71.8% 71/94230402 0.0% 6/71 8.5% 106893591 83320964 +3438 chr4 + 190214555 139181292 139181291 139181359 68 CTTTAAGCTTCTAGGCCTTTTTCTGTGCATGTATATACATATACATATATTTATATACTAAATATAAA chr4 - 94230402 58870644 58870643 58870707 35359696 35359695 35359759 64 CTTCAAGCT----GGGCTTTTTTAATGTATGTATATATGTGTACATATGTTTATATATAAAATATCAA ...:.....----..x......:x:..:.........::.:.......:........:x......x.. 9M4D55M 51/64 79.7% 64/94230402 0.0% 4/64 6.2% 80310648 NA +3057 chr4 + 190214555 139186824 139186823 139186871 48 CAAAAAAAAAAAAAAATATATATATATATATATATACACACACATATA chr4 - 94230402 70707586 70707585 70707633 23522770 23522769 23522817 48 CAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..:.....x.::....x:x.........................::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 68479238 NA +3005 chr4 + 190214555 139186825 139186824 139186871 47 AAAAAAAAAAAAAAATATATATATATATATATATACACACACATATA chr4 - 94230402 60979354 60979353 60979400 33251003 33251002 33251049 47 AAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ....x...x.....x.x........:.:...............:.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 78207471 NA +3636 chr4 + 190214555 139189554 139189553 139189626 73 CTGCAGCCTGGATCTCCTGTGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGAACTGCAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:::.x..:...x.:.....::x.:.x.xx:x........::...............:..x..... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 120992428 69222127 +3068 chr4 + 190214555 139190223 139190222 139190268 46 CTGAGCTTTTTTTTTTTTTTTTTCTTTTTGAGACGGAGTCTTGCTC chr4 - 94230402 5847644 5847643 5847689 88382714 88382713 88382759 46 CTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTC ..:x................:.:..........x.xx......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 133342579 56871976 +3444 chr4 + 190214555 139208666 139208665 139208724 59 GTTTTTTGGGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTGTTTTCTTTCT chr4 - 94230402 56879528 56879527 56879586 37350817 37350816 37350875 59 GTTTGGTGGGTTTTTTTTTTGTTGTTTGTTTTTTTTTGGTTCGTTGGTGGTTTTTTTTT ....xx.................x...x.........x.x.:....x..x...:...:. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 82329138 NA +3079 chr4 + 190214555 139208669 139208668 139208757 89 TTTTGGGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTGTTTTCTTTCTTTCTTTTAACAAAAGTGACTCCATTTTGATTCT chr4 - 94230402 70681050 70681049 70681138 23549265 23549264 23549353 89 TTTCTGCTTTTTCATTTTTTAGTTTTCTACTTTTTTGTTGTTGTTTTCTGCTTTTTATTTTCTAGCACCAGCAATTCTTATTTAGTTTT ...:x.x.....:x...x..xx....:.x:.....x.........x.:.x....:.x.:..:..:..xx..::.:..:xx...::..:. 89M 58/89 65.2% 89/94230402 0.0% 0/89 0.0% 68527619 NA +3037 chr4 + 190214555 139208672 139208671 139208724 53 TGGGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTGTTTTCTTTCT chr4 - 94230402 42385933 42385932 42385985 51844418 51844417 51844470 53 TGGGTTGTTTTTTTGTTTTTTTTTTTTTTTACAGTGTTTTGTGCTCTTTTTCT ......x.......................x::..xx..xx..:.:.:..... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 96822739 93391816 +3196 chr4 + 190214555 139208675 139208674 139208731 57 GTTTTTTTTTTGTTTTTTTTTTTTTTTTTGGTTGTTGTTGTTTTCTTTCTTTCTTTT chr4 - 94230402 76612833 76612832 76612889 17617514 17617513 17617570 57 GCTTTTTTCATGTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGGTTTTCTTTACTCT .:......:x...x..x............x............xx:.......x:.:. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 62595842 NA +3171 chr4 + 190214555 139219716 139219715 139219778 63 GAAAGAGAGAGAGAGAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG chr4 - 94230402 81015520 81015519 81015582 13214821 13214820 13214883 63 GAATGTGAGAGAGAGACAGAAAGGAGGGAAGAAGGCAAGCAATGAACTAAGGAACATAAGAAG ...x.x..........x........:.....:.:.x...x..x...xx......x:x.:.... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 58204196 NA +3268 chr4 + 190214555 139221515 139221514 139221552 38 AAAAAAGAAACAAAACAAAAAACAAACAAACAAAAAAC chr4 - 94230402 17429026 17429025 17429063 76801340 76801339 76801377 38 AAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAAC ..:...:............................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 121792489 68422066 +3473 chr4 + 190214555 139225505 139225504 139225587 83 CTGCAACCTCTGCCTCTCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGAGCCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:::...........x...x..x.x........::.:.........:.:....x.x.--.:....::.. 71M2D10M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 121028379 69186176 +3123 chr4 + 190214555 139241785 139241784 139241846 62 AAAAGAAAGAAAGGAAAAAAAAAAAGAAAGAAAAACACCCAGATTCCTT-AAGCTAACTGTAA chr4 - 94230402 91666808 91666807 91666870 2563533 2563532 2563595 63 AAAAGAAATAAAGGAAAAAGAAAAACAAAGCAAAACATGCTGTTTCCTTGAAAGTAAATGCAA ........x..........:.....x....x......:x.x.x......-..:x...x..:.. 49M1I13M 50/62 80.6% 63/94230402 0.0% 1/62 1.6% 47574977 NA +3434 chr4 + 190214555 139253537 139253536 139253606 70 CTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGGGTAGCTGGCATTACAGGTGCCTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.:...........x...x.xx.x........:..::........x.:....x....--:....::.. 59M2D9M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 121056398 69158157 +3046 chr4 + 190214555 139254784 139254783 139254842 59 TATACACACACACACACACACACACACACACACACACATATATCTATATATATATCTTG chr4 - 94230402 87372741 87372740 87372799 6857604 6857603 6857662 59 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTG ...x:x..x...........x.........:x:.:..:...:.x::.......x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 51882043 NA +3106 chr4 + 190214555 139292296 139292295 139292351 56 CAACAGGTCTACAAACAAACAAACAACAAACAAAAAAAACC---CCATCCCCCCCAAAA chr4 - 94230402 13871587 13871586 13871645 80358758 80358757 80358816 59 CAACAAGTTCAAAAACAAACAAAAAACAAACAAAGAAAACCAAACCATCCCACAAAAGA .....:..::.x...........x..........:......---.......x.xx..:. 41M3I15M 46/56 82.1% 59/94230402 0.0% 3/56 5.4% 125420709 64793846 +3071 chr4 + 190214555 139298075 139298074 139298119 45 AAAACAAAAGAAAAAAACCAACAACCTCCCACCTCCCCACACACC chr4 - 94230402 70195880 70195879 70195924 24034479 24034478 24034523 45 AAAAAAAAAAAAAAAAACCACCAACCCCCCCCCCCCCCACACCCC ....x....:..........x.....:...x..:........x.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 69102195 NA +3056 chr4 + 190214555 139306574 139306573 139306633 60 CTGGTTTTTTTTTTTTTGGTCTGGTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTGT chr4 - 94230402 57911420 57911419 57911479 36318924 36318923 36318983 60 CTGGTGCGTTTTTCTTCAGGTTAGTGCTTTTTTTGTTTTGGTTTGGTTTGGTTTTTTTGT .....x:x.....:..::.x:.:..x:.............x....x....x...x..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 81395154 NA +3249 chr4 + 190214555 139307344 139307343 139307424 81 CTGCAGCCTCCACCTCCCGGGCTCAAGCTATCCTCCTAGCTCAGTCTCCCGAGTAGCTGCGACTACAGGCGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:.....:xx.x..:.:...:.....:xx.:.x.xx:......:..::.:........x:......x.:.::....:::. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 121110218 69104337 +3810 chr4 + 190214555 139327325 139327324 139327407 83 CCACAACCTCCGTTTCCCGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGCGCTGCCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx:x:.:.:...........x...x..x.x........::...........:......--.....:.::.:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 121130199 69084356 +3138 chr4 + 190214555 139339752 139339751 139339792 41 AAACAAACAAACAACAACAACAACAACAAAAAACAACAAAA chr4 - 94230402 18021899 18021898 18021939 76208464 76208463 76208504 41 AAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAA ..........................x........:x:... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 121317853 68896702 +3006 chr4 + 190214555 139358161 139358160 139358206 46 TAAGAAGTTTTTTTGTTTGTTTTTGTTTTTGTTTTTTTTTTTTTGA chr4 - 94230402 49775610 49775609 49775655 44454748 44454747 44454793 46 TGAGTGGTTTTTTTGTTTGCTTTTGTTTTTGTTTGTTTTGCTTTAA .:..x:.............:..............x....x:...:. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 89582551 NA +3255 chr4 + 190214555 139358174 139358173 139358220 47 TGTTTGTTTTTGTTTTTGTTTTTTTTTTTTTGAGAGAGAGAAAGAGT chr4 - 94230402 88274014 88274013 88274060 5956343 5956342 5956389 47 TGTCTGATTTTGGCTGTGTTTTTTTTTTTTTGAAAGAGAGAGAGAGT ...:..x.....x:.x.................:.......:..... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 51084160 NA +3944 chr4 + 190214555 139359204 139359203 139359282 79 CTGCAACCTGCACCTCCTGGGTTAAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCATGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..::x.x..:.......x.....x...x.xx.x.........:...........:.:....--.:...:.... 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 121162078 69052477 +3080 chr4 + 190214555 139371469 139371468 139371527 59 TCTCTTAAAAAAAAAAAAAAGAAAAGTAGCACACACACACACACACACACACACACACA chr4 - 94230402 31590335 31590334 31590393 62640010 62640009 62640068 59 TCTTTGAAAACAAAACTGAAAAAAGACAGCACGTGCACGCACACACACACACACGTATA ...:.x....x....xx:..:...:::.....:::...:...............::.:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 107781134 82433421 +3050 chr4 + 190214555 139410486 139410485 139410577 92 GAAGGAAGGAAGGAGAGAGAAAAGAATGGAAGGAAGGAAGGAAAAAGAAAAGAATGAAAGGAAGGAAGGAAGGAAAGAGAAAGAAAAAGAAA chr4 - 94230402 38419406 38419405 38419497 55810906 55810905 55810997 92 GAAATAAAAAAGGATAGAGAAAATAATGGGAAGACACATGGAACTGGCAGGTGAAGACAGAAAAAAAGGCATGAAAAAGAAAATCACAGAGA ...:x..::.....x........x.....:.:..x:x.x....xx:.x.::x:.x..x..:..::....x.x....:.....:xx.x...:. 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 100991080 89223475 +3033 chr4 + 190214555 139410519 139410518 139410617 99 AAGGAAGGAAAAAGAAAAGAATGAAAGGAAGGAAGGAAGGAAAGAGAAAGAAAAAGAAAGAAAGAGAAAAAGAAAGAAAAGAAAGAAAAAAAATCTCAA chr4 - 94230402 78549522 78549521 78549620 15680783 15680782 15680881 99 AGAGAAGGTGCACGGATAGAAATACTGTAGGGAAGATGAGGAAGGAAAAGTAGAAAGATAAGTCAGATATAGAAAGAAAATGAAAAAAAAAAATCCGAA .::.....x:x.x.:.x....xx.xx.x.:.....:x::.:...::....x.:..::.x:.:xx...x.x..........x:..:..........:x.. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 60860997 NA +3331 chr4 + 190214555 139410545 139410544 139410605 61 GGAAGGAAGGAAGGAAAGAGAAAGAAAAAGAAAGAAAGAGAAAAAGAAAGAAAAGAAAGAA chr4 - 94230402 59433060 59433059 59433120 34797283 34797282 34797343 61 GGAATGCAGACTGGGAAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGAA ....x.x..:xx..:.....:......:.........:.x:....:....:...:.x.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 79977485 NA +11458 chr4 + 190214555 139454026 139454025 139454524 499 GCAAGGGCGGGGCGGGAAGGTGCGCAGGCGCGCTCGGGGCTGGTGGGCGGTGGCTCCTGGGAAGTTGCGCAGCCGAACTGGCCGGCTGGGCGCGCGCTCTTGCGGTGGCGTAATCTCTCAGCCTTTCTGTGTC-----------TCCTTTCC-TCCGCCTCAG--------------TTTGGGGCGGGTCGGGG--GAATGGCTGAGGAGATGGAGTCGTCGCTCGAGGCAAGCTTTTCGTCCAGCGGGGCAGTGTCAGGGGCCTCAGGGTTTTTGCCTCCTGCCCGCTCCCGCATCTTCAAGATAATCGTGATCGGCGACTCCAATGTGGGCAAGACATGCCTGACCTACCGCTTCTGCGCTGGCCGCTTCCCCGACCGCACCGAGGCCACGATAGGGGTGGATTTCCGAGAACGAGCGGTGGAGATTGATGGGGAGCGCATCAAGGTGAGCGGATGGGGAACTGTTGGG-----------GAGGACAGGGTGACAGGTGTCCCAACCCCA------CCGTGGGCTGGTCGCTGGCCGTGTGC chr4 - 94230402 92669957 92669956 92670457 1559946 1559945 1560446 501 GCGGGGTCGGCCCGGGAGGCTGCG-ACCCGCGCT---GGCTC-CGCGCGGAGACGTGCGGGGCTGTGCGGGGCGGGGCCGGT------GGCG-GTGCCGCTGCG-CGGGGCGGTCCCGCAGCCTTCCTGCGCCCGACCACCTGATCCGCTCCGCCCGCCGCAGCCGCAGCCTTTGTGTGTGCGGTGCGGCGGTGCGGGATGGCGGCGGGAGGAGGGCGGCCGCCGGGCCCGGATTCCTCG----------------CTGGAGCCCTA--------------CGTGCAGACCCGCATCTTCAAGATCATCGTCATCGGAGACTCCAACGTGGGCAAGACGTGCCTGACCTTCCGCTTCTGCGGGGGCACCTTCCCCGACAAGACCGAGGCCACCATCGGCGTGGACTTCAGGGAGAAGACGGTGGAGATCGAGGGGGAGCGCATCAAGGTgggccgcggcggccccggcgggcggATCGCATCGGGGTCCGGAGGCGGTCGGTCCCGGCCCCGCACCGCCCGCGGGCTGCCCGCACGCCGGCTGC ..::..x...xx.....:.x....-.xx......---....x-:.x....x.:.x:x:...:xxx....x:..x.::.:..:------....-.:..:x:....-:..x.:::..:.x.......:...:.:.-----------...x:...-:.....x...--------------.x..x..:.x.x...x.--.:.....x.x..:::x:.:.:x.:...:x.:xx.::::.::...----------------.x..:...::.--------------:.:x.:xx................x.....x.....x........:...........:..........x...........xx...xx..........x:x...........x..x..x.....:...x.:..:x:::..........:..x..................:..x.xx.x..xx.:.x:...-----------.:..x.x..:x.xx:xxx.....::....:------...:......x:...xx....xx... 24M1D9M3D5M1D39M6D4M1D11M1D28M11I8M1I10M14I17M2I44M16D11M14D190M11I30M6I26M 313/456 68.6% 501/94230402 0.0% 88/456 19.3% 46784069 NA +11804 chr4 + 190214555 139472679 139472678 139473050 372 TTTTTAGATCCAGCTATGGGACACAGCAGGACAAGAACGATTCAGAAAGAGCATGGTTCAGCACTACTACAGAAATGTACATGCTGTTGTCTTCGTGTATGATATGACCAACATGGCTAGTTTTCATAGCCTACCATCTTGGATAGAAGAATGCAAACAACATTTGCTAGCCAATGATATACCACGGATTCTTGTTGGAAATAAATGTGACTTGAGAAGTGCCATACAGGTACCCACAGACTTGGCACAAAAATTTGCTGACACACACAGTATGCCTTTGTTTGAAACGTCTGCTAAAAACCCCAATGATAATGACCATGTGGAAGCTATATTTATGACCTTGGCTCATAAGCTTAAGAGCCACAAACCATT chr4 - 94230402 92673817 92673816 92674188 1556215 1556214 1556586 372 TTCTTAGGTGCAGGTGTGGGACACGGCCGGGCAGGAGCGGTTCCGGAAGAGCATGGTGGAGCACTACTACCGCAACGTGCACGCCGTCGTCTTCGTGTACGACGTCACCAAGATGACGTCCTTCACCAACCTCAAGATGTGGATCGAGGAGTGCAACGGGCACGCCGTGTCCCCCCTCGTCCCCAAAGTGCTGGTAGGGAACAAGTGTGACTTGAAGGACCTGATCCAAGTGCCGTCCAGCATGGCCCTCAAATTCGCCGACGCCCACAACATGCTGTTGTTCGAAACCTCAGCCAAGGACCCTAAGGAGAGCCAGAACGTGGAGTCCATCTTCATGTGCCTGGCCTGCCGGCTGAAGGCGCAGAAATCGCT ..:....:.x...x.:........:..x..:..:..:..:...x.:...........xx...........x.x..:..:..:..:..:...........:..::.x.....x...:.xxx:..:xx:.:...xxx:x:x.....x..:..:.....xx::..:x:xx.:x..xx:xx::.x..xx:::.x..x..x..:..:..:..........:::::x:x..x..:..:..xx.x::.x....x.xx.....:..:...:.x....::....:x.....:.....x..x..:..::....:..x..x.::x.xx.:.....:x.:..x..:...xx.:....::::x:...x...:xx..x...:.::. 372M 230/372 61.8% 372/94230402 0.0% 0/372 0.0% 46798862 NA +3002 chr4 + 190214555 139478434 139478433 139478507 74 CTGCAACCTCCACCTCCTGTGCTAAAGCAATCTTCCTACCTCAGCCTACCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:...x.:.x...::x.::x.xx:x........x:...........:......x...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 121281308 68933247 +3392 chr4 + 190214555 139512736 139512735 139512796 61 CTTTTTTTTTCTTATTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTT chr4 - 94230402 76182411 76182410 76182471 18047932 18047931 18047992 61 CTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ........x..x.x...xx........x............:...x.:..xx...:...... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 63330325 NA +3232 chr4 + 190214555 139526026 139526025 139526091 66 TTTTTGTTGTTGTTGTTTGTTTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGAGTCTCTGTGTCAC chr4 - 94230402 17488402 17488401 17488460 76741943 76741942 76742001 59 TTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTGGT-------AAGAAAGGTTTCTGTGTAAC .................xx..................x.-------.::x.::..:.......x.. 39M7D20M 49/59 83.1% 59/94230402 0.0% 7/59 11.9% 122037624 68176931 +3008 chr4 + 190214555 139561505 139561504 139561556 52 AAAAACAAACAACAACAAAAAAAACCCTCACACACACACACACACACACAAA chr4 - 94230402 52796027 52796026 52796078 41434325 41434324 41434376 52 AAAAGGAAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAA ....:x.................:xxxxx.x.......:............. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 86765478 NA +3799 chr4 + 190214555 139572612 139572611 139572854 243 CCCTAATCATGATTTCAA--CTTGATTACATCTCCCAAGCTCGCTCTTTCTTTCTTTCCTTCTTTCTTTCCTTCCTTTCTTTCTTTCCTTCCTTCTTTCTTTCTCTCTCT----CTGTCTCCCTCCCTGCCTTCCTTCCTTCCTCTCTCTCTACCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 91731701 91731700 91731932 2498471 2498470 2498702 232 CCCTAATCCTGACTACAGGGAGAGAGGAAATCTCCCA-----GCTCTGGGTTTCT----------CATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTC--TCCATCTCTTAATACATCCATCCCCGCACCCGCCTCACCCCCCT ........x...:.x..:--xxx..xx.x........-----.....xxx.....----------.x..:...:..x::..x..........::...:.......:..:.----x.x...:..x::::x...:....x::..xx.x:.:x:...:.:..x..:.:.x.x.::x.:x:.x::x..x.:.:..x.:x:.......--...x..::.:xx.x.x...x...::x.x:..x:.::x..::... 18M2I17M5D13M10D45M4I89M2D44M 136/226 60.2% 232/94230402 0.0% 23/226 10.2% 47840911 NA +4016 chr4 + 190214555 139578871 139578870 139579111 241 CTTCCTTTCTTTCATGCCCTTTCTTTTCTTT-TTCTTTCTTTCT--------TTCTTT-----CTTTTTTTTCTTTCTTTCTT----TTTTCTTTC------TCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTT-CTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTC----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 69435943 69435942 69436211 24794192 24794191 24794460 269 CTGCCTACCCTTCAAGCTCCTCTTATTCTTTCTTGTTTCTTTTTAACCCTAATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTG-GACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGGGTCTTACTTCTTTTCTGACTACTTCACCAAGCTTCTGCCTCTCTTCCCATCTTCTATTTTGGTCCTTTTTATTCCTTT ..x...x:.:....x..:.:.::.x......-..x.......:.--------..x...-----......:.x..x..x..:.:----.x...:.:.------:..:.:x.x...::...x..::....:..::.-xx......:.x::......:.:-..:.x...:.::..::.:.x....:..x:xx.xxx.:..x:......:..xx..x::.:x.----:....x:..:....:.:x....::x..:.xx:::.:...x..:.... 31M1I12M8I6M5I20M4I9M6I32M1D22M1I61M4I47M 150/240 62.5% 269/94230402 0.0% 30/240 12.5% 70142928 NA +3361 chr4 + 190214555 139578873 139578872 139579085 213 TCCTTTCTTTCATGCCCTTTCTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTC----------------------------TCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 69879706 69879705 69879938 24350465 24350464 24350697 233 TTCTTTCTTTTTTGTACTGCCATTTATCATTCTTTTCTTCTGAACTAGTTTGGGATCCATCTTAATTTTTTCTTTCTTTCTTTTTTTAATGTGGTTATTAATACTTCATTTAAA--------CCTTCCCCCCTTACCCCCCCTTTTTTTCTCCAAAGACCGTGTCAAAAGAATTTGCAAGTCCCAATGAATTACATTCTATTTTTTTTTTTCTTTTTGCCTTTTGCATTTTTTTGTCTTCT .:........:x..:x..x:.x...x.:x......::....xxx:.xx...xxxx..:x....xx............:.:....:..xx.x.xx..x.:xx.x....:...xxx--------.:..:.:::...x.:::.:....:......----------------------------..:.xx.xxx..x.x..::x..:...::.......:.x:....:x:x:...:..x::.... 114M8D30M28I61M 124/205 60.5% 233/94230402 0.0% 36/205 17.6% 69699167 NA +3018 chr4 + 190214555 139578904 139578903 139578959 56 CTTTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTTTTCTTTCTCTTTTTTCTT chr4 - 94230402 15963380 15963379 15963435 78266968 78266967 78267023 56 CTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ......:.......:......:::.:..xx...:......:xx...:.x....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 123615524 66599031 +3344 chr4 + 190214555 139578929 139578928 139579049 121 CTTTCTTTCTTTTTTCTTT------CTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTT chr4 - 94230402 43081900 43081899 43082022 51148381 51148380 51148503 123 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACC----CTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTT ..::...:...:x.x...:------..x.:::.:....::..:...:.:..::.x:.----...:x.x..::x...:xx....xxx:....x.....................x.xx:.....::.. 19M6I32M4D66M 76/117 65.0% 123/94230402 0.0% 10/117 8.5% 96497029 93717526 +3803 chr4 + 190214555 139578929 139578928 139579081 153 CTTTCTTTCTTTT------TTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCT----TCCTTCGTTTCTCT---------------TTCTT---------------TTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151433 56151432 56151625 38078778 38078777 38078970 193 CTTTCTTCCCTTTCACAGCTCCTTACTCTTCTTTCTTACTCTTATTGTTCTATTACCCTTAATATCTCTCAAGAATAAAACACATACTTGCAGTAGTAGGTAGGTCATGCTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT .......:.:...------.:...x.....:......x....:x..x.:..----:....x:.x.....---------------.x...---------------.:x.x:.:x.xxx..:...:.:..:.x..:.....x.xx.xx..:.:..x.x........::.:............::.:......x.. 13M6I32M4I14M15I5M15I89M 107/153 69.9% 193/94230402 0.0% 40/153 26.1% 83427496 NA +3011 chr4 + 190214555 139578933 139578932 139579033 101 CTTTCTTTTTTCTTTCTCTTTTTTCTTTCTCTCTTTCTCCTTCCTTCGTTTCTCTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCT chr4 - 94230402 83960511 83960510 83960611 10269792 10269791 10269892 101 CTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTT ...:x...x....:...::::xx.x:.::.::....x.:....x.x.x.....:xx:.....x...::..x:.:....::......x:.x.:.:...x.:. 101M 61/101 60.4% 101/94230402 0.0% 0/101 0.0% 55618422 NA +3364 chr4 + 190214555 139578978 139578977 139579112 135 TCGTTTCTCTTTCTTTTCTTTTCTTTCT-----------TTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCT-TTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT chr4 - 94230402 51102250 51102249 51102394 43128009 43128008 43128153 145 tCAATTTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTT-TTTATCTATTCATATCTGT-TTTCTTTGCCCATCTGTGTCTTTT ..:x..:.....x.:....:...:x...-----------..x.....:....:.x......:.x.:xx..::.-....:.::.:.......:.:.x.x.:..-...x.:.x..:x.x...x.-.......x:::x.:.x.x...... 28M11I34M1I28M1D19M1D24M 90/133 67.7% 145/94230402 0.0% 14/133 10.5% 88476728 NA +3211 chr4 + 190214555 139578996 139578995 139579075 80 TTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 45600389 45600388 45600468 48629935 48629934 48630014 80 ttTGCTATGTTTGTATATCTGTCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTATTCTTTTACACTTT ...x..x.x...x.x.x...x..:x...x.......:..::.:......x.....x::......:x......:x:x.... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 93978607 NA +3450 chr4 + 190214555 139578996 139578995 139579103 108 TTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCTC-TCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 69039968 69039967 69040075 25190328 25190327 25190435 108 TCTTCTCTCCTT-TTTCTACTGTTTTATACCTCTCATCTCTGTCTATTCTCTCTTACATTTCTTCTCTACCACATTTGATTTTTTTCTTTTCTCTCTCATCTTTGCTTT .:....:..:..-.....x:.x:...x.x:.....-.....x...x....:....x.x......:::.x.:x:x...xx..:...::..:.:...:..x.::..x.... 12M1D22M1I73M 72/107 67.3% 108/94230402 0.0% 2/107 1.9% 70539028 NA +3038 chr4 + 190214555 139579010 139579009 139579085 76 TTCTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ..:.:...:..:.x:.:.....x.xx:xx..::...x.x...:..:.::.:............::.:......x.. 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 83427460 NA +3057 chr4 + 190214555 139583204 139583203 139583290 87 TTCTTTTTATTTTTCTTTCTTTTTTTTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGCTGGAGTCTGGC chr4 - 94230402 1569687 1569686 1569770 92660633 92660632 92660716 84 TTGTTCTGGCTTTGCTCGCTTTTCTTTTTTGTTGGCTTTTCTTTTTCTTTCTCTCATTTTAATGTTTTTT---AACTTGAATTTTGC ..x..:.x::...x..:x.....:......x..xx...........:..::.:..x....xx.x......---.:..x..:.:.x.. 70M3D14M 59/84 70.2% 84/94230402 0.0% 3/84 3.6% 138013517 52201038 +3064 chr4 + 190214555 139588273 139588272 139588329 57 CAAAACTTCATCTCTACTAAAAATACAAAATATATATATATATATATATATATATTT chr4 - 94230402 4200248 4200247 4200304 90030099 90030098 90030155 57 CAATGCTACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTT ...x:..x...:.....:.:x..x.:x.:............:.:.:........... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 135388025 54826530 +3223 chr4 + 190214555 139590985 139590984 139591078 94 AGAAAACAACAACAACAACAAAAACCCCAAACCAGCAAACAAATAAAGCAAAACCTCCAGTGCAGCAACCAAAGGAGAATTTGAAATAATGATG chr4 - 94230402 17110605 17110604 17110692 77119711 77119710 77119798 88 AGAAAACAACAACAACAACAAAAACCCCAAAAC-----ACAAATCACAAAATACCAAAAGTTCATCCTTGTAGGAAGAA-TAAAGATAATAATG ...............................x.-----......x.x:x..x...xxx...x..x.xx:xx.:.:....-.x:.:.....:... 33M5D41M1D14M 66/88 75.0% 88/94230402 0.0% 6/88 6.8% 122480380 67734175 +3533 chr4 + 190214555 139602030 139602029 139602150 121 ATTTTAAGTATATATAAATGCATATATTTATAAATATATATGTATATAAGTATATATAAATACATGTATGTATATAAGTATATATAAATACATGTATATATATAAGTATATATAAATACAT chr4 - 94230402 73121096 73121095 73121216 21109187 21109186 21109307 121 ATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..:.::x..::..::.x..x....:.:x....x.:.x.x:::.:x:..x:..::....::....:.x:.:...:.:....:..........::x:.:.x.x.:.x::..:.....::.x.. 121M 70/121 57.9% 121/94230402 0.0% 0/121 0.0% 66480934 NA +3353 chr4 + 190214555 139602064 139602063 139602175 112 TATATATGTATATAAGTATATATAAATACATGTATGTATATAAGTATATATAAATACATGTATATATATAAGTATATATAAATACATATATGCTTATGAATATATACATATA chr4 - 94230402 73121102 73121101 73121207 21109196 21109195 21109301 106 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATAC------GCCCACAGAGACACACATGTA .:.::...:....xx:..:.:...x.:...x:x:::.:x:..x:..::....::....:.x:.....:.:....:..........------..::.:::.x.:.:....:.. 85M6D21M 65/106 61.3% 106/94230402 0.0% 6/106 5.7% 66480962 NA +3044 chr4 + 190214555 139611013 139611012 139611046 34 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................:................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 120681099 69533456 +4088 chr4 + 190214555 139613940 139613939 139614133 194 ATGAGAAATATTGGGTTTTGTATTTGTTTTCACTTTAGATGCCTGGTGTCTTAACATAAAATATGTATTGAACTGCATATATATATATATATACACACACACACATACACATATATATACACATATATATACACATATATACACATATATACACACATATATACATATATACACATATATACATATATATACAC chr4 - 94230402 4417292 4417291 4417457 89812946 89812945 89813111 166 ACGAAAAATACTG--------ATTCATTTTT--CTTACATGCCTGTT-------CATAAAA----------ACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAAC .:..:.....:..--------...::....:--:...x.......x.-------.......----------...xx.x..x..x.:...................x:x.....:::..:x:x:.x.::.:.:::..xx.x:..:x..x...:........x..:x.....:.-..:.x.:..xx.:.....x.. 13M8D10M2D14M7D7M10D101M1D21M 114/166 68.7% 166/94230402 0.0% 28/166 16.9% 135196648 55017907 +3196 chr4 + 190214555 139614012 139614011 139614085 74 CTGCATATATATATATATATACACACACACACATACACATATATATACACATATATATACACATATATACACAT chr4 - 94230402 66904839 66904838 66904912 27325491 27325490 27325564 74 CTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...:x.x:......:..::..........:...:.....:....x..x::x:.x:.:..:...xx:....:... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 72709173 NA +3810 chr4 + 190214555 139614013 139614012 139614125 113 TGCATATATATATATATATACACACACACA----CATACACATATATATACACATATATATACACATATATACACATATATACACACATATATACATATATACACATATATACATAT chr4 - 94230402 73121108 73121107 73121224 21109179 21109178 21109295 117 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT .......x:...:.:.........x.x:..----:.:.:..:....x:.....:x:.....:::x:..:...:.x...:::x....x.x.:.:....:....x:..x..x.x.x... 30M4I83M 74/113 65.5% 117/94230402 0.0% 4/113 3.5% 66492905 NA +3153 chr4 + 190214555 139614018 139614017 139614082 65 ATATATATATATATACACACACACACATACACATATATATACACATATATATACACATATATACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:..::..:.......:.....:........x..x::x..x:.:......xx:...::.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 72709171 NA +3153 chr4 + 190214555 139614033 139614032 139614095 63 CACACACACACATACACATATATATACACATATATATACACATATATACACATATATACACAC chr4 - 94230402 7596412 7596411 7596474 86633929 86633928 86633991 63 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ..:...x.::......x..:..........:::..:..:...x.:...:..x..:::..:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 132017621 58196934 +3466 chr4 + 190214555 139614038 139614037 139614129 92 ACACACATACACATATATATACACATATATATACACATATATACACATATATACACACATATATACATATATACACATATATACATATATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .:.x:.......xx:.:..:...:::.:.x:.:::..x....:.....:...:::.x.......x..x..:.x......:..x..:.::.:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 111670501 78544054 +3501 chr4 + 190214555 139614106 139614105 139614202 97 ATATACACATATATACATATATATACACACACATATATATACATATATATACACACACACACATATA---TATATTTTTTTTTGAGATGGAATCTCACTT chr4 - 94230402 7596413 7596412 7596512 86633891 86633890 86633990 100 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCTGGAGTGCTAGCTCATTT ...:.x.:::...:.x..:...........:...:....:.x.:.....:x:..:...:...::x:.---.x.:.:....::..:::..xx.x....:.. 67M3I30M 63/97 64.9% 100/94230402 0.0% 3/97 3.1% 132017693 58196862 +3147 chr4 + 190214555 139614136 139614135 139614185 50 ACATATATATACATATATATACACACACACACATATATATATTTTTTTTT chr4 - 94230402 8681930 8681929 8681979 85548424 85548423 85548473 50 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTT .:...x.....:....:...:........:.......xx.x......... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 130932206 59282349 +3306 chr4 + 190214555 139657532 139657531 139657614 83 AAGAAAGAAGAACGAGGGAAGAACAAGAAGAAAGAAAGAAGAAGGAGGAAGAGGAGGAGGAGAAGGGAGGGGGAGGAAGGGGA chr4 - 94230402 32025570 32025569 32025651 62204752 62204751 62204833 82 AAAACAGAATAA-AAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAGGTGGA ..:.x....x..-:...::....x..........:....x:.....:.....xxxx.....:.x:.:..x..:..x.:.x... 12M1D70M 58/82 70.7% 82/94230402 0.0% 1/82 1.2% 107631962 82582593 +4016 chr4 + 190214555 139657546 139657545 139657741 196 AGGGAAGAACAAGAAGAAAGAAAGAAGAAGGAGGAAGAGGA-GGAGGAGAAGGGAGGGGGAGGAAGGGGAGGAGAAGGAGGGGAGGGAGAG-----------GCGGAGAAAGGAAAGGAAGAAGTGGAAGAGGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAA chr4 - 94230402 56098324 56098323 56098529 38131874 38131873 38132079 206 AGAGATAAGCAGCAAGACAGTGAGAAG--GGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAA ..:..x:.:..:x....x..x:.....--...x.:...x:.-::......x.x.x.:xx.x:x.x:.:....x..:.x:..x:.:.:...:-----------..x.:....:::xx......:x...:.xxx:..x.::.:::.x...:..xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx....... 27M2D12M1I49M11I106M 115/194 59.3% 206/94230402 0.0% 14/194 7.2% 83559222 NA +3116 chr4 + 190214555 139657664 139657663 139657753 90 AGGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGCAGGCAAGCAG chr4 - 94230402 29503818 29503817 29503907 64726496 64726495 64726585 90 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAG .::....:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x.x.:.x.xx::....... 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% 110153846 80060709 +3822 chr4 + 190214555 139661752 139661751 139661834 83 CTGCAACTTCCACCTCTTGGGTTCAAGTGATTCTCATGTCTCAGCCTCCCCAGTAGCTGGGATTACAGATGTGCACCATCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:.::xx.x..::............x...x..x.x........::.x.........:.:...--.:........:::.. 66M2D15M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 121464626 68749929 +3084 chr4 + 190214555 139698797 139698796 139698895 99 TCTTTTCCTTTCTTCTTTCTTCATCTTCTTTTTTTTTTTTCCAC-------TGGTCCTTGCACTGAATTCATTTATCTTGCAATGGTGGTCAACCACAGCTCACAG chr4 - 94230402 45600422 45600421 45600526 48629877 48629876 48629981 105 TCTTTCCCTTTTTTCTATCTTTATCTTCTTTTATTCTTTTACACTTTGTAGTAACCACTGC-CTGATATTGTCTTACCTGTAAAGCTTATTAATCATAATTAGCAG .....:.....:....x....:..........x..:....x...-------.:::.x:...-....xx.::.:.xx.:..:..x.x.x:.:..:..:.::.x:... 44M7I10M1D44M 66/98 67.3% 105/94230402 0.0% 8/98 8.2% 94098375 NA +3129 chr4 + 190214555 139713471 139713470 139713526 56 GACAGAAAAAAAAAAAAAAAAAAAAAAGGAGAAAAATAATTCAGTTGACTGAGAAG chr4 - 94230402 30437997 30437996 30438052 63792351 63792350 63792406 56 GGTGGAAAAAAAAAATAAAATAGAAAAGGAGAAATATAATTGGTTTGGCTAAAAAG .:::...........x....x.:...........x......x:x...:..:.:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 109275474 80939081 +3665 chr4 + 190214555 139769995 139769994 139770082 88 CTGCAGCCTCAAACTCCTGGGTTCAGGCGATCCTCCTACTTCAGCCTCCTGAGTAGCTGGGACCACAGGTGTATACTACCATGTCTCA chr4 - 94230402 18197126 18197125 18197211 76033192 76033191 76033277 86 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGTATCA ..:.....:x..:..:.........:.:.x.:.x.xx:x:.......::::.........:..:...x...--:..:..::...x... 71M2D15M 59/86 68.6% 86/94230402 0.0% 2/86 2.3% 121572869 68641686 +4697 chr4 + 190214555 139787737 139787736 139787895 159 AGTTCAGAGCCTATCAGAGATTATGAGAAGTTTGGATTATTTTTCCCAAAGTGCATTACTTTACACTTAACCAAATTAAATTTCATCTGCTTTCACACTACCCAATCCCCTAGTTTGTTTAGCTTTGCCTGAAGTGTCTCATAGCAATCCTTAATTTTT chr4 - 94230402 52580972 52580971 52581130 41649273 41649272 41649431 159 AGCTCAGAACCCACCACTGTACATGTGAAGTTAAGGTTATATTTTCCCATGTGAATCACTCTACACTTATCTACACTGAATTTAATTTACCATTTCATCATCTAGTCGCTCAATCTCCTGATGTCTTTATGCAGTCCTTCATGGCTTGCCTTCATCCTT ..:.....:..:.:..xx.xx:...x......x:.:....x...:..x.x...x..:...:........x.:.x.:.:.....x..:.:.:x.:x..::.:.:.:..x.::.:.:.x:.x.xx.:.x:x..x...x::....:..xxx....x..::.. 159M 97/159 61.0% 159/94230402 0.0% 0/159 0.0% 87206765 NA +3113 chr4 + 190214555 139813998 139813997 139814070 73 TGCAGCTAGCTACAGTACACAAACACAAACACACACACACACACACACACACACACACAGAATGATGATTTCA chr4 - 94230402 67311893 67311892 67311965 26918438 26918437 26918510 73 TACAATCAGCCTTATTTCATTAACATAAACACACAAACACACACAAATACTCACACATGGAACATTCAGTTCA .:..:::...:x:.x.x..:x....:.........x.........x.:..x......::...::x.x.x.... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 72502105 NA +3225 chr4 + 190214555 139829198 139829197 139829285 88 AGGAGGGAGGAAGGAAGGATGGAAGGAGAAAGGAAGGAAAGAAGGAAGGAAGGAAAAAGAAAGGAAGAAAGAAAGAAAAGAAAAAAGA chr4 - 94230402 36691892 36691891 36691973 57538430 57538429 57538511 82 AGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAA------AAAGTAACAAATCAGAAGAGA ......::...:....x:.x.....:::...x:.x:.:.:......:...:x...:.....------....x..x...xx.:..:... 61M6D21M 57/82 69.5% 82/94230402 0.0% 6/82 7.3% 103137306 87077249 +3236 chr4 + 190214555 139829228 139829227 139829313 86 AGGAAGGAAAGAAGGAAGGAAGGAAAAAGAAAGGAAGAAAGAAAGAAAAGAAAAAAGAAAAGGAAA--------------GGAAAGAAAAGGTGATTCCT chr4 - 94230402 9237695 9237694 9237794 84992609 84992608 84992708 100 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAATGGCAACTTTT ...:::x.x..x:...::...:.:x.:x.::........:....:...:.......:...:...:.--------------.........x..::.:.::. 66M14I20M 58/86 67.4% 100/94230402 0.0% 14/86 16.3% 130591533 59623022 +3264 chr4 + 190214555 139829231 139829230 139829302 72 AAGGAAAGAAGGAAGGAAGGAAAAAGAAAGGAAGAAAGAAAGAAAAGAAAAAAGAAAAGGAAAGGAAAGAAA chr4 - 94230402 25066985 25066984 25067056 69163347 69163346 69163418 72 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA ..:..x...x:....:..x:.x.:...:x..:..x.::.::.:...:..:.........:x...:....... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 114762246 75452309 +3811 chr4 + 190214555 139832180 139832179 139832262 83 CTACAACCTCCACCTCCCGGGTTCAAGTGATTCTCATGCCTCAACCTGCCAAGTAGCTAAGATTACAGGCGTGTGCCACTACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx.x..:.:...........x...x..x.x....:...x:.........:::.:....--....::.....::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 121635054 68579501 +3502 chr4 + 190214555 139842605 139842604 139842674 70 GCCTCCTGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGTGTGTGCCACCAC chr4 - 94230402 18197138 18197137 18197202 76033201 76033200 76033265 65 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:x..........x...x..x.x........::...........:.:..:.x...-----...... 59M5D6M 52/65 80.0% 65/94230402 0.0% 5/65 7.7% 121645467 68569088 +3010 chr4 + 190214555 139864678 139864677 139864741 64 AAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAATCTTGAATGATAAATTCCTGATGACTAAAAGT chr4 - 94230402 64512368 64512367 64512431 29717972 29717971 29718035 64 AAAAAAAAAAAAAAAAAAACTAGAGGAAGAAATCTAAACAAGTAACTTGTTTTTGGCTGAAAGT ...................xx...::.........x:.xx::...x..x:.xx..:..:..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 75352310 NA +3054 chr4 + 190214555 139864916 139864915 139864989 74 AAACTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCACAAAGCTTTACTTGTTATGTTCTTCCCTCTTA chr4 - 94230402 29061404 29061403 29061477 65168926 65168925 65168999 74 AGATTTGCCTTTTTTTTTTTTTTTTTTCCTTTTAAATCACCACAACCTTTGGCCTTTTGTACTCTCTCATTCTA .:.:....:..................::....xxx.::......xx:..x:.:.x..:.::...::.x.::.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 110803512 79411043 +3902 chr4 + 190214555 139879528 139879527 139879605 78 AAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAGAAAGAAAATGGTGGTGGTGGTAGTGGTTGGGAGAAAATGG chr4 - 94230402 92738613 92738612 92738689 1491714 1491713 1491790 77 AAAAGAGGGGAAATAAAAGAAATGAAGGGACAGAAAAGAA-GAGGGAGGCGGTGGTGGTGGTGGTGGGGAGAAGATGG ....:.::::...x........x...::..x.:..:....-..:::x..:.........:.....x.......:.... 40M1D37M 57/77 74.0% 77/94230402 0.0% 1/77 1.3% 47140915 NA +3551 chr4 + 190214555 139882847 139882846 139882936 90 TTAAAAACACAAACAAATAAACAAACAACAACAACAACAACAAAACCTATAATTCTACATCAGGTAAACTATTAATCAAA--TGTAAGGATA chr4 - 94230402 35083937 35083936 35084027 59146376 59146375 59146466 91 TTAAATACAAAAACAAACAAACAAACAACAACAACAAAAACGGGAAGAATAGTTTTG-ATCAAAAATGTTTTTCACCACATCTGTAAGGATA .....x...x.......:...................x...:::.xxx...:..:.:-....::x.x::.x..x.:..x.--.......... 57M1D22M2I10M 66/89 74.2% 91/94230402 0.0% 3/89 3.4% 104798910 85415645 +3133 chr4 + 190214555 139882857 139882856 139882921 65 AAACAAATAAACAAACAACAACAACAACAACAAAACCTATAATTCTACATCAGGTAAACTATTAA chr4 - 94230402 79230836 79230835 79230895 14999508 14999507 14999567 60 AAACAAACAAACAAACAATAACAACAACAACAAAA-----AAACCCACATAAATTTAAATATGAA .......:..........:................-----..x:.:....x.:x.x..x...x.. 35M5D25M 49/60 81.7% 60/94230402 0.0% 5/60 8.3% 60652021 NA +3033 chr4 + 190214555 139941525 139941524 139941558 34 TGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGT chr4 - 94230402 51655337 51655336 51655370 42575033 42575032 42575066 34 TGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT .................x................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 88286188 NA +3101 chr4 + 190214555 139941526 139941525 139941570 45 GTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTATT chr4 - 94230402 51655329 51655328 51655373 42575030 42575029 42575074 45 GCTTTTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTT .:.x..x............x..x...................x.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 88286197 NA +3070 chr4 + 190214555 139941527 139941526 139941564 38 TTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGT chr4 - 94230402 83911739 83911738 83911776 10318627 10318626 10318664 38 tttTTGTTGTTGTTGTTGGTGGTGGTGGTAGTGGTTGT ..x..........................:.....x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 56029788 NA +3124 chr4 + 190214555 139941527 139941526 139941561 35 TTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51318585 51318584 51318619 42911784 42911783 42911818 35 TTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ..x................................ 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 88622942 NA +3201 chr4 + 190214555 139941527 139941526 139941564 38 TTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51655333 51655332 51655370 42575033 42575032 42575070 38 TTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ..x...............x................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 88286194 NA +3338 chr4 + 190214555 139941527 139941526 139941561 35 TTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51655336 51655335 51655370 42575033 42575032 42575067 35 TTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 88286191 NA +3041 chr4 + 190214555 139941530 139941529 139941572 43 TTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTATTGG chr4 - 94230402 51318585 51318584 51318627 42911776 42911775 42911818 43 TTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTGG ..x............x...................xx.x.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 88622945 NA +3162 chr4 + 190214555 139942153 139942152 139942199 47 GGACGGAGGGAGGGAGGGAAGGCAGGCAGGCAGGCAGGCAGGCAGGC chr4 - 94230402 30854904 30854903 30854950 63375453 63375452 63375499 47 GGATAGAGGAAGAGTGGGAAGGCAGAAAGGCAGGCGGGGAGGCAGGC ...::....:..:.x..........:x........:..x........ 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 109087249 81127306 +4472 chr4 + 190214555 139948795 139948794 139948919 125 ATTAAACCTCACAAGATCCCTGTAAGGTAGAAA----CTATCATCCCCATTGTACGTGTGAGAAAACCGAGGCACAGGTAAGAGAGGTAATACACTAGTAGTGCCAGAGTTGGGATGT-GAACACAGGCA chr4 - 94230402 10729160 10729159 10729281 83501122 83501121 83501243 122 ATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGC--------CCAGAGTCTGGGTACAGAATCCAGGTA ...x.:........x.:......:......:x.----......x.:.....x...:x...:......:........x::.:.xx.:.....x::.--------.......:x..:.::-...:x....:. 33M4I58M8D15M1I11M 85/117 72.6% 122/94230402 0.0% 13/117 11.1% 129219635 60994920 +3024 chr4 + 190214555 139978596 139978595 139978665 70 CAGCATCAACCACATCAAAAAAAAAGAGAGAGAGAGAGAGCACACAACTGCGCTAGGCATTCACAACATT chr4 - 94230402 94076888 94076887 94076952 153451 153450 153515 65 CGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAAGCCAGGCA-----AACATT .::..x....x...x.........................x:xxx..:::x..:.....-----...... 59M5D6M 50/65 76.9% 65/94230402 0.0% 5/65 7.7% 45901708 NA +3124 chr4 + 190214555 139989833 139989832 139989919 87 CCCACCACACACAAACAAACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGATT chr4 - 94230402 67652053 67652052 67652139 26578264 26578263 26578350 87 CTTACTGCACCAAGAAAAGCAGAGGGAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATT .::..::...xx.:.x..:..x.x:x.xx:x.....::...x...:...:.xx:.:.:.:.:.:.....:.............:... 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 72337780 NA +3081 chr4 + 190214555 139989860 139989859 139989913 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:.........:.........:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 72337776 NA +3686 chr4 + 190214555 140024090 140024089 140024178 89 TCTTAACAACCTTATAAAATAGATACTATTATTATC----CAATTTTCAAGATGTGGAAACTGAGGCACAGATAGGATAAGTAACTTGCCAAG chr4 - 94230402 10729168 10729167 10729258 83501145 83501144 83501235 91 TCACAATACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAG ..x:..:.x..:.:.:.::...:..--....:....----.x.....xx..:..x.:.............x.:...x.......:.....x.. 25M2D9M4I53M 65/87 74.7% 91/94230402 0.0% 6/87 6.9% 129294922 60919633 +4082 chr4 + 190214555 140024303 140024302 140024385 83 CTGCAGCCTCAAACTCCTGGGCTCAAATGATCTCCCTGTCTCAGCCTCTGGAGTAGCTGGGACTATAGGTGCACATCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC--CACTGTG ..:.....:x..:..:.....:....:..x.::x.xx.x........:.x:.........:....:.x......--....... 74M2D7M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 121827177 68387378 +3095 chr4 + 190214555 140069372 140069371 140069455 84 AAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAG chr4 - 94230402 49393627 49393626 49393710 44836693 44836692 44836776 84 AAGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAG ...:.x:.xx....x.:.....x.....xxxxx:...x:...:xx:..::..x...x.x.............::.:........ 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 90675745 NA +3312 chr4 + 190214555 140069388 140069387 140069490 103 AGGAGGAGGAGGAGGAGGAGGAGGAGG------AGGAGGGGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAA------AGGAAGAAGAAGGAGGAG chr4 - 94230402 49393628 49393627 49393742 44836661 44836660 44836775 115 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGAGCTGGTCAGTACCGCGGGACGAGGCGGGAGGGG ....x..xx..:.x.:.....x.....------...x:.:..xx:..:...x...x.x.............::.:........xx..xx.:------:...x..:.x:.....:. 27M6I58M6I18M 72/103 69.9% 115/94230402 0.0% 12/103 11.7% 90675760 NA +3277 chr4 + 190214555 140069391 140069390 140069472 82 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAA chr4 - 94230402 49393628 49393627 49393709 44836694 44836693 44836775 82 AGGACGACCAGAACGGGGAGGCGGAGGCTTTCAAGGCAGAGATCAAGAAGACGGACGTGAAGGAGGAGAAGAGGAAGAAGGA ....x..xx..:.x.:.....x.....xxxxx....x:....xx:..:...x...x.x.............::....:..:. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 90675763 NA +3488 chr4 + 190214555 140069415 140069414 140069548 134 AGGAGGGGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAGGAGGAGGAGGGGAGG---AGGAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGGAAGAAGAAGGAG chr4 - 94230402 1312665 1312664 1312801 92917602 92917601 92917738 137 AGGGAGGGAAAGTGGACAGAGAACAGATGGAGAAATGAACCCAGCAGGAGGAGAAGATGCTCAGAGAAGAGGGGAGGGGGGGGAGGAAGTGAGAGGAAAAAGGCAGAAAGGGGGATGGTGCTAGCACAGAGAAGAAG ...::.....:.x...x.::..:x...x....:.:x:::xxx..x.....:..:...x:xxx...::.::.:.....:..:..:.:::---..::.:.:....x:..:.:..:..x..x.xx..x.x::.....:.. 88M3I46M 78/134 58.2% 137/94230402 0.0% 3/134 2.2% 138756750 51457805 +3025 chr4 + 190214555 140069599 140069598 140069653 55 AGGAAGAAGAAGAAGAAGAAAAAGAAAGAAGAAAGAAGAAGAAGAAGGAGGAGGA chr4 - 94230402 27809321 27809320 27809375 66421028 66421027 66421082 55 AGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAA ....::...::.....x.:...x:..........x..:...:.:...:....::. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 112260278 77954277 +3147 chr4 + 190214555 140069634 140069633 140069717 84 AAGAAGAAGAAGGAGGAGGAGAAGGAGAAGGAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGAAGAAGAAGGAGGAAGAAAGAA chr4 - 94230402 79401160 79401159 79401243 14829160 14829159 14829243 84 AAATAAATAAAGTAGAAGAGGAACTGGAAGGAGTAAAAAGGAAAAAAAAAAAAAAAAAGTACCACACAGACAGAGAAGAAAGAA ..:x.:.x:...x..:..::...xx:.......x..:..:....:.....:...:....x.xx.x.x::.x:::.......... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 60668474 NA +3067 chr4 + 190214555 140074140 140074139 140074262 123 AAGAAAGAAAGAAAGAGAGAGAGAAAGGAAAGAAAG--------AAAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGA-------AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 21758891 21758890 21759028 72471375 72471374 72471512 138 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGA ..:::..xx......:...:...x....:....:..--------..x..x.::x.x:x.:.x.::x.x.:...x.x:x..x..x.:.....-------......:...::..:.:.:....:.:...::x..:x.... 36M8I47M7I40M 78/123 63.4% 138/94230402 0.0% 15/123 12.2% 118315249 71899306 +3137 chr4 + 190214555 140074169 140074168 140074234 66 AAGAAAGAAAGAGAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237695 9237694 9237760 84992643 84992642 84992708 66 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.::.x.x..x.:......:..:x..x::...:.....:....:....:..:...:....::... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 130836474 59378081 +3375 chr4 + 190214555 140076855 140076854 140076905 51 TTTGTTGTTGTTTTTGTTTTTTTCTTTTTTGTTGTGGTTGTTGCTGTTGTT chr4 - 94230402 72992116 72992115 72992166 21238237 21238236 21238287 51 TTTGTTGTTGTTTTTACCTTTCATTATTTTGCTTTGGTTGTTGCTGTTGTT ...............:::...:x:.x.....:.x................. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 67084739 NA +3046 chr4 + 190214555 140083941 140083940 140083994 54 CACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 72431857 NA +3129 chr4 + 190214555 140083943 140083942 140083996 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 72431859 NA +3212 chr4 + 190214555 140083945 140083944 140083998 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 72431861 NA +3295 chr4 + 190214555 140083947 140083946 140084000 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 72431863 NA +3070 chr4 + 190214555 140083949 140083948 140084002 54 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 72431865 NA +3265 chr4 + 190214555 140091488 140091487 140091561 74 CTTTCAACTAGAGGGAATGATTAGTGTAAAACAAAACAAAACAACAAAACAAAAACAAAACAAAAAAAAAAAAC chr4 - 94230402 16389339 16389338 16389408 77840995 77840994 77841064 70 CCCTTAAGTAAAAGAAATAATCATC----AACAAAACAAACCAACCAAACAACAACAACAAAAAAAGAAAAAAC .::.:..x..:.:.:...:..:.x:----...........x....x......x.....x.x.....:....... 25M4D45M 53/70 75.7% 70/94230402 0.0% 4/70 5.7% 123702149 66512406 +3674 chr4 + 190214555 140104337 140104336 140104484 148 TCTCAAAAAAAAAACCAAACC-TATTTTATATATATATATAATATATATATATTATATATTATATAATATATAATATAATATATAATATACACGAATGTGTAT--ATACATATATAAATGTATGTGTGTGTATATATATAATTTTTTTTTT chr4 - 94230402 35241665 35241664 35241810 58988593 58988592 58988738 146 TCTAATAGAAAACACCAGGCTGTATATCAAATTTAAGTTGAAAACACATGTATTAAATTG---ACAGTA-AGAATA-AATTTGTCATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTT ...x.x.:....x....::.:-...x.:.x..x..x:.xx..x.:.:..:.....x..xx---.:.:..-.x....-...x.:.x...xx:.::....:x...--.x....:.x..x..::........:..............:...... 21M1I38M3D6M1D6M1D26M2I46M 100/143 69.9% 146/94230402 0.0% 8/143 5.6% 104862672 85351883 +3484 chr4 + 190214555 140104437 140104436 140104492 56 ATATACATATATAAATGTATGTGTGTGTATATATATAATTTTTTTTTTTTTTTTGA chr4 - 94230402 8681930 8681929 8681985 85548418 85548417 85548473 56 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA .....x.......x.......:::::::...:......:.:............... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 131422507 58792048 +3607 chr4 + 190214555 140145949 140145948 140146030 82 CTGCAACCTCCACCTCCCAGGTTCAAGCAATTCCCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTGTGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:..:..:xx.x..:.::........::x...x.xx.x........:............:.:....--....::....::. 67M2D13M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 121948823 68265732 +3124 chr4 + 190214555 140151198 140151197 140151244 47 AGGAAGGGAGGAGGAAGGGGAGGGGGAGGAGGAAGAGGAGGAGGGAA chr4 - 94230402 73085411 73085410 73085457 21144946 21144945 21144992 47 AGGAAGGAAGGGGAAAAAAAAGGGGGAGGGGGAAGAGGAGAAAAGAA .......:...:.:..::::.........:..........:.::... 47M 36/47 76.6% 47/94230402 0.0% 0/47 0.0% 67065787 NA +3435 chr4 + 190214555 140280192 140280191 140280252 61 CTGCAGCCTCAAACTCCTGGGTTCAAGTGATCCCCCCACCTCAGCCTCCCGAGTAGCTGGA chr4 - 94230402 18197126 18197125 18197186 76033217 76033216 76033277 61 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGA ..:.....:x..:..:.............x.:.x.xx:x........::.:.......... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 122083066 68131489 +3083 chr4 + 190214555 140284743 140284742 140284824 82 ATCTGACTACATAATTGCTATTTCTTTCAAAAAAAAAAAAAAAAAAAAAAGATTGGGAAAAAGGGAGGAAGGA-AAGGACAGG chr4 - 94230402 28315441 28315440 28315523 65914880 65914879 65914962 83 ATTTGGACAGAAAATTCCAATTTGTTACAAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGG ..:..:x:.x.x....x.x....x..x...:.x.......x....x....x.x..::..x....:..x..:..-...:..... 73M1I9M 59/82 72.0% 83/94230402 0.0% 1/82 1.2% 111969302 78245253 +3108 chr4 + 190214555 140284773 140284772 140284835 63 AAAAAAAAAAAAAAAAAAAAGATTGGGAAAAAGGGAGGAAGGAAAGGACAGGCTTAGACTCTG chr4 - 94230402 37322393 37322392 37322455 56907948 56907947 56908010 63 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGACTTGACCACTG .....:................xx.:..:..::x.::.:........:::.:...::x.x... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 102962380 87252175 +3465 chr4 + 190214555 140348474 140348473 140348577 104 TTCCTTCTTTTTTAAGGCTGAATTCTTCCACTATATGTATGTGTGTGTGTGAGTGTGTGTATATGTATGTATATATATGTGTGTATATATATGTATATATATAC chr4 - 94230402 39267116 39267115 39267213 54963190 54963189 54963287 98 TTCCATGTATGTAAAGAAAGAATTCC------GTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACAAAC ....x.x.x.x.x...:xx......:------:...:x........:..x.x.:::...xx.:...:...:......x.....:..x.:....x.....:.x.. 26M6D72M 68/98 69.4% 98/94230402 0.0% 6/98 6.1% 101081358 89133197 +3079 chr4 + 190214555 140348512 140348511 140348592 81 ATGTGTGTGTGTGAGTGTGTGTATATGTATGTATATATATGTGTGTATATATATGTATATATATACGCACACACACACACA chr4 - 94230402 35554961 35554960 35555041 58675362 58675361 58675442 81 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..:.:.x..x...x.....:::.....x:............::.::.x.x..:....x.x..x:.x.:x..x.:...x... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 104793551 85421004 +3399 chr4 + 190214555 140348540 140348539 140348608 69 ATGTATATATATGTGTGTATATATATGTATATATATACGCACACACACACACATCACATTTTCTTTATT chr4 - 94230402 8681913 8681912 8681980 85548423 85548422 85548490 68 ATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTT ...x....x:....x..-.....x..:.......:..:.........:...:..x..x:...:...x.. 17M1D51M 53/68 77.9% 68/94230402 0.0% 1/68 1.5% 131666627 58547928 +3236 chr4 + 190214555 140354499 140354498 140354548 50 TCTCAAAGAACTTTTTTTTTTTTTTTTTTTTTTTGCAGGATATTTTTTAC chr4 - 94230402 53684479 53684478 53684528 40545875 40545874 40545924 50 TCCCAGAGAACTTTTTTCTTTTCTTTTTTTTTTGGCAGAATATGCTCTGC ..:..:...........:....:..........x....:....x:.:.:. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 86670020 NA +3003 chr4 + 190214555 140380149 140380148 140380216 68 ATAAAAGTCATCTGTGACTTCCCTATTAGCTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 62444473 62444472 62444540 31785863 31785862 31785930 68 ATGCATGCCATAGCTGAGCTTCTGGTTAGTTTTATCTTCCTTTTTCTTTCTTTTTTTTTTTCTCCTTG ..:x.x.:...xxx...x:.:.:x:....:...x.:..:..........:...........:.::... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 77935676 NA +3232 chr4 + 190214555 140396867 140396866 140396944 78 ATATATACATATATATATATATATGTATATATATATATATGTATATATATATATATACACATATATATATATACACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.::..:.:.::...x.:......x..:....:....:x..:..xx...:.:.....:.:.:.:.x.:...x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 132001079 58213476 +3398 chr4 + 190214555 140396868 140396867 140396939 72 TATATACATATATATATATATATGTATATATATATATATGTATATATATATATATACACATAT-ATATATATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .:.:......:x.:......:...:.:.x......xx:.......:.:...:...x....:.:-....:.... 63M1I9M 53/72 73.6% 73/94230402 0.0% 1/72 1.4% 103033828 87180727 +3025 chr4 + 190214555 140403371 140403370 140403433 63 AATGCTTCTATGATAATCAGAAGGAAGGTATTCTTTCGTTCTTTTTCATTTTTTAAATAGAGG chr4 - 94230402 94150929 94150928 94150991 79412 79411 79474 63 AGTGCTTGTATCATGCTCAGAAGAAAGATTTCCCAAGGTTTTTTTTTTTTTTTTAAATGGAGG .:.....x...x..:x.......:...:.x.:.:xxx...:.....:x..........:.... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 46252442 NA +3313 chr4 + 190214555 140408871 140408870 140408960 90 ATATATATATATATACACACACACACATATATATACACACATATATGTGTATATGTAT--ATATATTTGTGTATATATGTATATATGTGTAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:...................x:x.:....:..::x:x:.x..:.:......--.x::....:x:....:.::...x...x.:... 58M2I32M 61/90 67.8% 92/94230402 0.0% 2/90 2.2% 135991528 54223027 +3028 chr4 + 190214555 140408877 140408876 140408931 55 ATATATATACACACACACACATATATATACACACATATATGTGTATATGTATATA chr4 - 94230402 66904847 66904846 66904901 27325502 27325501 27325556 55 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACA ......:...::...........:.:.:.....:..x..x..x:.x:......:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 73504030 NA +3305 chr4 + 190214555 140446685 140446684 140446768 84 ATTTTGGTTACTTCCTGTATTCTGGTAGCTTTGGAGCTGGTTTGCTTTTGCTTCTCTAGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 84127208 84127207 84127289 10103114 10103113 10103195 82 ATTCTGTTTGTTTCTAGT--TCTGTGGGTTTTTGTTGTTGCTTGGTTTTGCTTGGCTGGTTTTGTCTTTTTTTTTTTTTTTTTT ...:..x..::...:x..--....xx:.:...x.xxx.x.:...x........xx..:.....x.:.................. 18M2D64M 60/82 73.2% 82/94230402 0.0% 2/82 2.4% 56319477 NA +3196 chr4 + 190214555 140446729 140446728 140446803 75 CTTTTGCTTCTCTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTGTGATGTTAGATTGTT chr4 - 94230402 16390115 16390114 16390189 77840214 77840213 77840288 75 CTCATGACCCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATTTTTAGTTCTGTTGTTTGTTTGTT ..:x..x::.::.:....:......:......:.......:::xx..x.x.......:.x..x....x.x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 124056614 66157941 +3023 chr4 + 190214555 140460797 140460796 140460843 47 AAAAACAAAACAAAACAAACAAAAAAACAAAAACAAAACTTTGGGAG chr4 - 94230402 38540320 38540319 38540366 55690037 55690036 55690083 47 AAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAG ......................:x.........x....::xx..:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 101920477 88294078 +3033 chr4 + 190214555 140471191 140471190 140471276 86 CCTCCTTTTCCTTTCGTTTCTCCTTTCTCCTTTTTGTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 93339650 93339649 93339735 890668 890667 890753 86 CCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCT .....x.:x...:.x........:.x.x.::.:..x.:...x...x::::.:.:.:..x..:...:..:.:.::.x.::...::.. 86M 52/86 60.5% 86/94230402 0.0% 0/86 0.0% 47131541 NA +3672 chr4 + 190214555 140473775 140473774 140473858 84 TACAGGCTCTACCTCCTGGGCTCAAATGATCCTCCTGCTGCAGCCTTCCAAGTAGCTGGGACTACAGGTGCAC--------ACCATCATTTC chr4 - 94230402 18197127 18197126 18197218 76033185 76033184 76033276 92 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCCTTTC .....x.:xx.x..:.....:....:..x.:.x.xx.x:x.......:...........:......x......--------.:....x.... 73M8I11M 63/84 75.0% 92/94230402 0.0% 8/84 9.5% 122276648 67937907 +3261 chr4 + 190214555 140580674 140580673 140580732 59 CTAAAAAAAGAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAGAAAGGAAGGAA chr4 - 94230402 7711347 7711346 7711405 86518998 86518997 86519056 59 CTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ......:x.......::...............:.xx::..x....:..::...:.:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 132869327 57345228 +3124 chr4 + 190214555 140580679 140580678 140580765 87 AAAAGAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAGAAAGGAAGGAAGGAGGAAAGAAAGAAGGCAAGCAAGAAAGCAAG chr4 - 94230402 30232163 30232162 30232249 63998154 63998153 63998240 87 AAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAGTTCAAG ...:.:x.....::x:...:.x.:....:..xx..::....:..x..x...........:.x:x:.::...x...x..:.:xx.... 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 110348516 79866039 +3748 chr4 + 190214555 140605176 140605175 140605314 139 CTCTCTTTATCTTTGTGATTAAACTGGTTTCTGGGTTTCAGCTTTGATAAAGACTATTTTTTATTCACATGTGCTTTTTGTTGTTGTTGTTGTTGTTGAGACGGAGTCTCCCTCAGTCACCAGGCTGGAGTGCAGTGGT chr4 - 94230402 60446910 60446909 60447045 33783358 33783357 33783493 136 ctttctttctttctGTTTTGACACTGGTCCCTGGATTTGCAAAATGATTTACACCTGTTTTTTCTCACAGGTTTTTTTTTTTGTTGTTGTTGTTATTT---CTGATACTTATTGAATTCTCAGGCTCCAAGGTAATGGT ..:.....x.:.:...xx.x.x......::....:...xx:xxx....xx.x..:xx.....x:.....x..x:.....x..............:..x---.x..xx..:x:.x.:.:x:......xx.:x.:.:.... 98M3D38M 88/136 64.7% 136/94230402 0.0% 3/136 2.2% 80158266 NA +4940 chr4 + 190214555 140633943 140633942 140634202 260 CTTACTTAGCCCAGAGACAAACTCCCGGAAGTTAATCAAAGAGTCTCCATTTTCATCTAATAACTGGAACAAGCGGGAGGCCAGAACGTCAGAGTGAGTTCCACATGCCCAAGGA---AAGAGAAGAGCAAACATTCCCTTGAACTGCTCGAAGTCAATGCGATACTGTTCCAGGTAGGGCAGGCTGGGGTCATGCCGGTCCAGCGCGTTGCTGCTCCCGCCCCAGTAGCAGCTGGTGAGATGTTCTGCCTGAAAAAGAATGG chr4 - 94230402 76692247 76692246 76692506 17537897 17537896 17538156 260 CCTACCAAGAACACAGGAAAATTGTTTGAAGTTGATAAGGCCATGGCAGTTCTCATCCAATAGTCTGAATGTCCACAATGCAATAGAGTCTCTGTTTGCACAGTGCGACCATGGGCTCAGGAGATGACAAAGAACTC---TGAATTGCTGGCAATCAATTCGATACTGCTCAAGATATGGCAGGCTGGCATCATGGTGTTGTAAAACAGGACTATTTACATTCCAATAGCAGGAAAGAAAGTGTTCCTTCTGCAAAGGGAAGG .:...:x..xx..x..:x...:.x::x......:..x.::xx:.xx.x:..:.....:....:::x...::xx.:x:.x..x.x.:x...xxx..xx.:x.x::::.x...x..:---.:....x..xx..:x.:..---....:....x.x.:.....x........:..x..:..x..........x:.....x:.x.x:.:x:.:xx:..::.:x.:::...:......xx::x:.::.....:x:...x...:.:.x.. 115M3I19M3D123M 147/257 57.2% 260/94230402 0.0% 6/257 2.3% 63941696 NA +4314 chr4 + 190214555 140657088 140657087 140657257 170 AAGACCTACCTCGTAGGAAGTTCTGATGAGTCTAAAGATGTCTACCTCAGGGTAAGGTTCCACATCATCGCTGAGCAAGGAGTGGAGGTGAGGAATGGGAGGCAGTGTGCTGTCTTTATTGGTCACACTGTCTAAATACCTGGAAGAAG--AATGCATCAGAAGTCA-CAGGA chr4 - 94230402 76694974 76694973 76695146 17535257 17535256 17535429 173 AACACATACTTCATTTGACTCTCGGATCAAATCAGTAATGTCCACTTTTGGGTGGTCACCCTTTGCATCACTGAGGTTGGAGCCCTGCTGCACAGCTGGAGGCAAAGGACTGTCTTTGTTGGTGACACTGTCAAAAAACCTGCGTGAAGCAAACACATGAGAAATCAGCAGGA ..x..x...:..:.xx..xx:..x...x.:x::.:x:.....:..:.:x....::xxx:..x:xx....:.....xxx....:xxx.x..x:x.::x.......:x.x:........:.....x........x...x.....x:x....--..::...x....:...-..... 149M2I16M1I5M 108/170 63.5% 173/94230402 0.0% 3/170 1.8% 63962114 NA +11776 chr4 + 190214555 140657523 140657522 140657818 296 ATACCTTCCCAAAACGGTCATGGCCTCCCCATCATCCTTGCAGTTCAACAGTTTGTCCACATTTGCATCCAGCACAGCTAGGGCCAACTGGAATATCACTTTAATTCCTTCATAGAAGAAACAGTCAACAACCACAACTGCACTCTCAAAAGGCATCACACTGAGAAATAGTGTGAGGAACCAAGACAGGGAGATGGTGGAAATCACGCCCAGGTCTTGCATGCAGTCGTACAGCTGTGGGACGTAGTCTCGTGCTAGCTCCTCAAAGACACCTTGGTCCACCAGTGCACCTGTGG chr4 - 94230402 76696758 76696757 76697053 17533350 17533349 17533645 296 ATACCTGTTGAGAACAGTCACAGCTTCTGCATCATCCTTACAAGCCAGCAACTTATCCATGTTGTATTCCAGCACTGCAAGTCCCAGCTGCAAGATTGCCTTTATTCCATCATAGAAGAAACAGTCCACCACATTGACTGCACTTTCAATAGGCAGCACACTGATAAAAAGGGTAAGGAACCAGGAGAGAGAGACCGAGGAGAAAAAAGTCATGCCCATCATGTGGTCTGTCAACTGAGGCAGATGAACTCTGATGAGCTCCTCAAATACTGCCTGATCTACCAAGGCACCTGCAG ......x::x.:...:....::..:..:x..........:..:x:..:..::..:....::..xxxx........x..x..xx...:...x..x..::.:..x.....x.................x..x..xx::........:....x.....x........x...x..x..:........:..x..:....:x.x...:.xx.x:x:..x.:.:xx....::...xxx..:...x..x.x:.::x...xx::x...........x..xx.:..:..:....:x.......::. 296M 200/296 67.6% 296/94230402 0.0% 0/296 0.0% 63960765 NA +6287 chr4 + 190214555 140659584 140659583 140659724 141 TTACCCACAACTCTGGTGTTGTAGTAATCTGGGAGCATGCGCTCACACAAAGCCACAAGCAGCCAGAAAGCTTCCTCCTCTTTGGCATAAAGCAGCAGCACTGAAGTGACAATATTCATGGCCTA-AAAAAGTGAAAGAGGA chr4 - 94230402 76698305 76698304 76698446 17531957 17531956 17532098 142 TTACCAATGATTCGACGATTGAAATAATCAGGTAGCATCCTTTCACACACAGCAACCAGCAGCCAGAATGCTTCTTCCTCCTTAGCATACAGCAGAAGTACTGATGTCAATATGTTCATTGCCTGTAAACAGTTAAATAAGA .....x.::.:..x:xx:...x.:.....x..x.....x.x:.......x...x..x...........x.....:.....:..:.....x.....x..:.....x..x.xx..:.....x....:-...x...x...x.:.. 125M1I16M 104/141 73.8% 142/94230402 0.0% 1/141 0.7% 63961279 NA +5651 chr4 + 190214555 140668910 140668909 140669054 145 GCCGTACCTGACAGCAGCAGCCAGAGCTCCCCACGCATGCTCTCCGGGATGCCCTTCAACACCAGCTCCCGCGTTTTCTCTGTGCGGTACATGCAGATCCCTTGCCCATACTCAGCAAAGTGAATCTTCCAGGCTTGCTCTTTCA chr4 - 94230402 76699892 76699891 76700036 17530367 17530366 17530511 145 GCAGTACCTGAGAAGAGTAGCCAGAGCTCTCCTCTTAAGGCTTCTGGGATCCCTCTTACAACTAAATCTCGAGTCTTCTTTGTTCGAAACATACTGACACCATGACCTCGTTCAAAAAAAAGGATATTCCAGGACTGTTCTTTCA ..x........x.:x..:...........:..x.x:.x.x::..:.....x..::.:.xx..:.:x..:..x..:....:...x..:x....:.x..:x..x..x..x:::...:x...:x.:..x.......x:..:....... 145M 96/145 66.2% 145/94230402 0.0% 0/145 0.0% 63969018 NA +3465 chr4 + 190214555 140674784 140674783 140674847 64 AAACTCCTGGGTTCAAGTGATCCTCCCACTTCAGCCTCCCAAGTAGCTAGGACTACAGGAGCAC chr4 - 94230402 18197136 18197135 18197199 76033204 76033203 76033267 64 AAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.............x.:.x.xx:x:.......::.........:.:......x.x.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 122477648 67736907 +3138 chr4 + 190214555 140687326 140687325 140687370 45 TGTGTGTGTGTGTGTGTCATATATATATATATATATATATATATA chr4 - 94230402 46964825 46964824 46964869 47265534 47265533 47265578 45 TGTGTGTGTGTGTAGGACATATATATATATATATATGTGTGTGTA .............:x.x...................:.:.:.:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 93722501 NA +3145 chr4 + 190214555 140689455 140689454 140689552 98 CCCCTTCCCTTCCCTTCCCTTCCCCTTTTTCCCTTCCCTTCCCCCTTTCCTTCCCTTCCCCCTTTTCCCTTCCATTCCCCCTTTTCCCTTCCCTTCTT chr4 - 94230402 34561254 34561253 34561350 59669053 59669052 59669149 97 CCTATACCCTTCCCCCCCCTTTCCCTTTAGCTCTCCCCTTTCTCCCTTTCTTGCCATCTGCA-CTCCTCATTGATGCACACACTTTGCTTGCCTCCTT ..:x.x........::.....:......xx.:..:.....:.:..:..:...x..x..:x.x-:.:.:.x.:x..x.x.x.x:..:x...x...:... 62M1D35M 63/97 64.9% 97/94230402 0.0% 1/97 1.0% 106128201 84086354 +3133 chr4 + 190214555 140689519 140689518 140689596 78 TTCCCTTCCATTCCCCCTTTTCCCTTCCCTTCTTTTTCCTTTCCCTTCTCCTTTTTCCCTTCCCTTCCCC--CTTTTCTT chr4 - 94230402 31929009 31929008 31929088 62301315 62301314 62301394 80 TTCAGCTCCTTGATCCCTCTGCCATTTCCTTCTCTTTCCCTTCCATTCTCAGTCTCTCCTGCCTTTTCCCCACTTTCCTT ...xx:...x.xx:....:.x..x..:......:.....:....x.....xx.:.::...x..:..:...--....:... 70M2I8M 55/78 70.5% 80/94230402 0.0% 2/78 2.6% 108760510 81454045 +3464 chr4 + 190214555 140689563 140689562 140689714 152 CTTCTCCTTTTTCCCTTCCCTTCCCCCTTTTCTTCCCTTCCTCCTACCTCCCCTCCTCTCCCTTCCCTCCCCTTCCCTCTCCCCCCCTCTCCCCTTCCCCCCTCCCCTTTCTCCTTCCTCCCCTCCCTTCCCTTCCCCTCCCCTTCCTTCCC chr4 - 94230402 79652970 79652969 79653114 14577289 14577288 14577433 145 CTTCACACCCTTACCCTTCCTTAGCTGTCTTCTTCAACTCTGGCT-------CATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTTTATCTCACATCCC ....x.x:::..x..:.:....xx.:x.:......xx:..:xx..-------.x:...x..:...:.x.......:...::x..:x....::.xx.:....x.::.::.::....:::.:x:.:.:..:x:.....::.:x:..:x.x.... 45M7D100M 83/145 57.2% 145/94230402 0.0% 7/145 4.8% 61036593 NA +3223 chr4 + 190214555 140689626 140689625 140689708 83 TCCCTCCCCTTCCCTCTCCCCCCCTCTCCCCTTCCCCCCTCCCCTTTCTCCTTCCTCCCCTCCCTTC-----CCTTCCCCTCCCCTTC chr4 - 94230402 34860160 34860159 34860247 59370156 59370155 59370243 88 TCTCTCCCCAGGCCCCGGTGCCTCTCTCCCTTTCCCCCCTCCCGCCGCTCATTCCCCCCGGCCCTCCGGGAGGTGTCCGCTCCCCTTC ..:......xxx..:.xx:x..:.......:............x::x...x....:...xx....:.-----x:x...x......... 67M5I16M 59/83 71.1% 88/94230402 0.0% 5/83 6.0% 105829466 84385089 +3247 chr4 + 190214555 140689724 140689723 140689794 71 CCTTCCCTTCCCTTCCCTTCCTCCCACCCCTTTTTTTTTTTTGAGACAGAGTCACGCTCTGTT---GCCCACAC chr4 - 94230402 72058108 72058107 72058181 22172222 22172221 22172295 74 CTTCTCCTCTCCTGACCTTCCCCCCCCCCCTTTTTTTTTTTTGTCACCCACCCCCGCTCTGCTGGGGCTCACAC .:.::...::...xx......:...x.................xx..xx.x:.x.......:.---..:..... 63M3I8M 53/71 74.6% 74/94230402 0.0% 3/71 4.2% 68631616 NA +3177 chr4 + 190214555 140696452 140696451 140696516 65 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGATAAAAAGAGGCATATGAAAATAATGTCTCATCA chr4 - 94230402 88558242 88558241 88558306 5672097 5672096 5672161 65 TCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAACTTTATTA .........:.x.................:.:.:::::.:..x:..x.....:..x:::.:..:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 52138210 NA +5708 chr4 + 190214555 140701497 140701496 140701620 124 TGCTTACCACAGGCGATGGTCCAGTAGACCAGGGAGTCTGGAGTCTGGTACAAGATTCGGTAAGGAGCGACCCGGGCGCTGGAGTCCAACACAACATCAAGGGTACCCACCAGCAGGCCTGAGG chr4 - 94230402 76712614 76712613 76712737 17517666 17517665 17517789 124 TACATACCACATGCAATGGACCAGTAGACCTGTGAGTCTGGTGTCTGATGCAGGATGCGAAATGGGGCCACTTTTGACGTAGAATCCAATACTGCATCTAGGGTTCCCACAAGAAGACCTGAAG .:.x.......x..:....x..........x.x........x.....:.:..:...x..:x.x..:..x..::xx.xxx.:..:.....:..x:....x.....x.....x..x..:.....:. 124M 89/124 71.8% 124/94230402 0.0% 0/124 0.0% 63988883 NA +3047 chr4 + 190214555 140704403 140704402 140704465 63 ACAAACAAACAAACAAACAAAACAAAAAATCAGAAAAAAAAAAAAAAAAG---AAAAGGACAAAAA chr4 - 94230402 52983629 52983628 52983694 41246709 41246708 41246774 66 ACAAACAAACAAACAAACCAAACAACCAATTGGAGATAGCATAAAAAATGTTAAAAAAGAAAAAAA ..................x......xx...::..:.x.:x.x......x.---....:..x..... 50M3I13M 50/63 79.4% 66/94230402 0.0% 3/63 4.8% 87720774 NA +3010 chr4 + 190214555 140709216 140709215 140709278 63 CTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACA chr4 - 94230402 32106688 32106687 32106750 62123653 62123652 62123715 63 CTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA ....:x...:x:.:..::..:...:.:x::.:...::::...............:....x... 63M 42/63 66.7% 63/94230402 0.0% 0/63 0.0% 108602528 81612027 +3334 chr4 + 190214555 140716919 140716918 140716968 50 TGTAAAAAAAAAAAAAACACAAACAACAACAACAACAAAAAAAGCAACTC chr4 - 94230402 4027219 4027218 4027267 90203136 90203135 90203184 49 TACAAAAAAAAAAAAAAC-CAAACAACAACAACAACAAAAAAAACCTCTC .::...............-........................:.xx... 18M1D31M 44/49 89.8% 49/94230402 0.0% 1/49 2.0% 136689700 53524855 +3113 chr4 + 190214555 140728465 140728464 140728513 49 AAAAGTAGAAATCTACTTGTTTTTTTTGTTTGTTTGTTTTGTTTTTTTT chr4 - 94230402 20794438 20794437 20794486 73435917 73435916 73435965 49 AAAATTTAAAAGTTCCTGGTTTTTTTTGTTTGTTTGTTTTGCTTTTTTT ....x.x:...x:.x..x.......................:....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 119934027 70280528 +3277 chr4 + 190214555 140728751 140728750 140728816 66 CTCTCGGGTTCAAGCGATCCCCCTTCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGTGCGCCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:::.........:.x.:.x.xxxx........:............:......--:....:.... 54M2D10M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 122531612 67682943 +3096 chr4 + 190214555 140768343 140768342 140768413 71 TTTAACTGTATGTCTTTGTATATTTATCTAATTATTTTCTTTTCTTCTTTCTTTCTTTTTTTTTTTTTTTG chr4 - 94230402 71841435 71841434 71841505 22388898 22388897 22388968 71 TTTAACGTTCTGAATGTTTATACAAATCCAATCACATTTCTTTCTTCTTTTTCTCTTTTTTTTTCTCTCTG ......xx.x..xx.x.x....:xx...:...:.:x..::..........:.:...........:.:.:.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 68926908 NA +3819 chr4 + 190214555 140772740 140772739 140772811 72 CTGCAACCCTTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:...xx:x..:.............x...x.xx.x........::.............:....x.::. 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 122575614 67638941 +4118 chr4 + 190214555 140799329 140799328 140799408 80 CTGCAGCCTTGGATTCCTGGGCTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACATCTGCATGCCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACT ..:.....:x::::.:.....:.......x...x.xx.x........::..................:x....--..... 73M2D5M 60/78 76.9% 78/94230402 0.0% 2/78 2.6% 122602203 67612352 +3080 chr4 + 190214555 140801331 140801330 140801384 54 TTGTTTTTATTTTCTCAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 87668174 87668173 87668227 6562176 6562175 6562229 54 TTGGCTTTATTTCCCTAGCTGTATTTACTTTTTTTTTTTTTTTGTCTAAGACAG ...x:.......:.::....x.x...x:...............x.:.:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 53133157 NA +3561 chr4 + 190214555 140802525 140802524 140802617 93 TGGGATCATAGCTCTCTGCAGCCTTGAGTTTTTGGGCTCAAGGGATCCTCCTGCCTCAGCCTCTCTAGTAGCTGGAGCTGGGACTACAAGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATG---TTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGA------ACTACACGTGC ...x.....:---:...:.....:x:..:..:....:.....x.x.:.x.xx.x........:..x..........------......x.... 10M3D63M6D11M 64/84 76.2% 84/94230402 0.0% 9/84 10.7% 122605411 67609144 +3041 chr4 + 190214555 140810784 140810783 140810908 125 CCTCTCTCCCTCTCTCTCTCTCTCC-------------CTCTCCCTCTGTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCTCTCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ....:.:xx.x.x...:..::..:.-------------..x......:x.:..::.:.:::......x.....xx.x.:..x:.::xx::..xxx::...x.::..:..:............x:xx..:.:...:... 25M13I100M 75/125 60.0% 138/94230402 0.0% 13/125 10.4% 97728897 92485658 +3378 chr4 + 190214555 140810835 140810834 140810921 87 CTCTCCCTCACTCTCCCTCTCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCTCTCTCCCTCTCCC chr4 - 94230402 23891362 23891361 23891448 70338955 70338954 70339041 87 CTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCC ...:.xx.::..:..x.....:.:x..:.x.:x:.:.:...x.:...:....:....::.::x.::..:...:.:.:....::.... 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 116919473 73295082 +3067 chr4 + 190214555 140810862 140810861 140810928 67 TCTCTCTCTCTCCCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCTCT chr4 - 94230402 51457788 51457787 51457854 42772549 42772548 42772615 67 TCTCTTTCTGTATCCATCCATCTCTTTCTCCCCCTACCACACTCCATCTCTTCCTTTCTTTTTCCCT .....:...x.x:.:x...x.....:....:....x:.x.x...:x.....:...:..::.:..:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 89353074 NA +3429 chr4 + 190214555 140810894 140810893 140811012 119 CCTCTCCCTCTCTCTCTCTCCCT---------------CTCCCTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCTCTCTCTCCTTCTCTCT----CCCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCCTCTCTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ....:..xx.x.x...:..:...---------------..x:.:...::.:...:.:.:.:..:.....:....x.x.::.x::.:xx:...----::..x.:...:............:..x.xx..:.:...:... 23M15I54M4I42M 77/119 64.7% 138/94230402 0.0% 19/119 16.0% 97729007 92485548 +3369 chr4 + 190214555 140810905 140810904 140810991 87 CTCTCTCTCCCTCTCCCTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCTCTCTCTCCTTCTCTCTCCCTCTCTCTCTCTCTCTCTC chr4 - 94230402 23891362 23891361 23891448 70338955 70338954 70339041 87 CTCCCGGTTGCTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTTTCTTTTTTTCCCCTTCCC ...:.xx.:x..:..x.....:.:x:...x.:x:.:...:...:.:......:......:::x.:..::...:.:.:..:.::..:. 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 116919543 73295012 +3409 chr4 + 190214555 140810967 140810966 140811098 132 CTCTCCCTCTCTCTCTCTCTCTCTCTCCCTC-----TCTCTCCCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCCCTCTCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCCCTCT chr4 - 94230402 43081888 43081887 43082024 51148379 51148378 51148515 137 CTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:..xx.x.x...:..::..::x.x.:..-----x..x......::.:...:.:.:.:..:.....:....x:x.::.x:.:.xx:..:xxx::...x.:...:....:.........:x.x:..::::.::... 31M5I101M 77/132 58.3% 137/94230402 0.0% 5/132 3.8% 97729079 92485476 +3559 chr4 + 190214555 140811019 140811018 140811155 137 CTCTCCCTCACTCTCCCCCTCTCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCCTCACTCTCCCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTCCCTCTCTCCTTCCCTCCTTC chr4 - 94230402 43081888 43081887 43082023 51148380 51148379 51148515 136 CTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAAT-GCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTC ...:..xx...x.....:::..::x.x.:..xxxx.-x..x..:...::.:...:.:.:.:..:.....:....x:x.::.x:.:.xx:...xxx.:...x.:...::.........:....x.xx:.:.:..:... 36M1D100M 81/136 59.6% 136/94230402 0.0% 1/136 0.7% 97729131 92485424 +3098 chr4 + 190214555 140814616 140814615 140814693 78 TCTGTCTCCAGCCATCCTTTTTCAATTTCTTTTTCTTTTTCTTTTGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 17388717 17388716 17388794 76841609 76841608 76841686 78 TCTGTCTCCGCAAAATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATTCT .........:xxx.x:.::.......:...:.:.....:...::.x.......::..:..x.:..::.:x.x.x..:. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 123425899 66788656 +3373 chr4 + 190214555 140881220 140881219 140881311 92 TGGCATGATCTTGGCTCACTGCAGCCTCCACCTCCTGGGCTCAAGCCATCCTCACACTTCAGCCTCTCAAGTAGCTGGGACTAGAGGCATAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......x..x..------..:.....:xx.x..:.....:.....:xx.:.x..x:x:.......:............:....x.x.:::.. 12M6D74M 61/86 70.9% 86/94230402 0.0% 6/86 7.0% 122684106 67530449 +3089 chr4 + 190214555 140896684 140896683 140896727 44 TAATAAAAAAAAAAAAACAAAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 17429019 17429018 17429062 76801341 76801340 76801384 44 TAATTACAAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAA ....x.x..:............x..x.................. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 123467665 66746890 +3002 chr4 + 190214555 140896691 140896690 140896727 37 AAAAAAAAAACAAAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 59709222 59709221 59709258 34521145 34521144 34521181 37 AAAAAAAAACCCAAAAAACAAACAAACAAACAAAAAA .........x.x......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 81187469 NA +3295 chr4 + 190214555 140896694 140896693 140896753 60 AAAAAAACAAAAAAACAAACAAACAAACAAAAAAAAA------TAATTTTTTTTCTTTAAAAAAGA chr4 - 94230402 9590817 9590816 9590882 84639521 84639520 84639586 66 AGAAGGGAAAAAAAACAAACAAACAAACAAAAAAAAACACTTCTGAGTCTTTTCCTCTAGAAAAAA .:..:::x.............................------.:.x.:....:..:..:....:. 37M6I23M 48/60 80.0% 66/94230402 0.0% 6/60 10.0% 131305877 58908678 +3729 chr4 + 190214555 140897835 140897834 140897922 88 TTACCTCCATTTTACAGATGAGAACTAGAGGTACAGAGAGGTTGAGCTATTTGTCCAAAGTTACACAGATAGCAGGTGGCAGGGTTGG chr4 - 94230402 14332048 14332047 14332135 79898268 79898267 79898355 88 TTACCTCTTTTTTACAGATGAAATATTCATGAATAGAAAGATGAAGCAATTTCTCCAAAGTTAGCCAGCAGGTCAGTGGCAGAGCTGG .......:x............:.xx.xx.x.x.:...:..:.x:...x....x..........xx...xx:.:x:.......:.:... 88M 62/88 70.5% 88/94230402 0.0% 0/88 0.0% 126565787 63648768 +5023 chr4 + 190214555 140925958 140925957 140926085 128 TAGGCTGTGCTGTG-CTTACCGGGATCCCTAGGGCTTTAAGAATGTTCATCTTGCACATGGGACAGGTACGATGGTCTAGAAGCCAGGGGTCAACACAGGACTTGTGGAAAAGATGCCTGCAATGAGAA chr4 - 94230402 76730384 76730383 76730512 17499891 17499890 17500019 129 TAGGTAAGACTGTGACTTACCTCAACACCTAGAACTTTGAGTATGTCACATTTGCACATCGGGCATGTCCTGTGTTCTAAAAGCCAAGGATCAATACAGTTTTTGTGGAAAAGATGGCTAGAGAAGGAA ....:x:x:.....-......xx:.:x.....::....:..x....:xxx:........x..:..x..x.x:..x....:......:..:....:....xx:..............x..:x.:x::... 14M1I114M 88/128 68.8% 129/94230402 0.0% 1/128 0.8% 64195574 NA +3168 chr4 + 190214555 140945509 140945508 140945631 123 ATACACACACTACATATATATACATATAAATACATATATACACTACATATATATATACATATATACATATATATACTACATATATACATATATACATATATATACTACATATATATACTACAT chr4 - 94230402 78881506 78881505 78881617 15348786 15348785 15348897 112 ATACAGACA------AAATACACATATTGAAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATAT-----ATGTATAGAACACAT .....x...------.x...:......x:.x.:x.....x::.x.:..::x.x:.x...x.:...:x.:..x...x.xx...........:.:.x........-----..:....x.x:.... 9M6D88M5D15M 77/112 68.8% 112/94230402 0.0% 11/112 9.8% 62064003 NA +3091 chr4 + 190214555 140951516 140951515 140951578 63 TCTTAAGCCAAGAGTGGTTTTTTGTTGTTGTTGTTGTTTTTTTTTTTTTTTGCAAGGAAAACA chr4 - 94230402 51354283 51354282 51354345 42876058 42876057 42876120 63 TTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGAAGAACCA .:.:..x:.x.x..::...................x:......:.......x:.::::..x.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 89597233 NA +4138 chr4 + 190214555 140967617 140967616 140967890 274 ACTCACCTGGTTCCTATCCCTGGCATTTGCATATCGAAACCTCTGGATGTAATAAAAGACGAGCCATGCGAGGGAAATGATCATCAGGACAATGAAG---GAGATGGAGACAAACACAACCGAAGTGCGGCTCACATATTTCTGCAAGTTCCGGGTT-----CCGATGGTGATGTACATTGTCACGGTGATGTTTCTTTCCAGCAGGCTTACTATCTCCTTCCCTTTTGGCTCAGGAATCATTATGGCCACGATGTCTTCTACACCTGTGGTAAGAGGGGAA chr4 - 94230402 76740421 76740420 76740688 17489715 17489714 17489982 268 ACTCACCTGTTTCCTGGACTGGGCCCTTGTGATCCTGAATCTGCGAGCAGAATAAAAAATGAAGTAGCCCA---CAGTTGCTGCTGTGACAATGAAAAACGACACTGAGACAAAGAAGATGGAATAGTGGTTCA--------TCCAGGGACCGTGCTTTTTCCCCACTTCAATAACCATGGTCACTTTCAGGCCACTCTCAATCCGGCGCAAGATCTCCATGCCTTTCAGGTTGCCAATCATAATGGCAACGATGCTTCCCGCACCT---GCAAAAGAGAAA .........x.....:xx.:x...x:...::xx:.x:..:..x:.::::x.......:.:..:x:.xx.x.---x.:.x:::::::x.........:---..x.:x........x.x:.:x...xx.:..:...--------.x..:.xx...x.:.-----..x.:xx::..:xx...x.....xx.x.x.::x..:..x.x.x...x:.xx......x.x.....::.x.::xx......x.....x......::.:.::.....---.:..:..:.:.. 71M3D23M3I34M8D15M5I105M3D12M 154/260 59.2% 268/94230402 0.0% 22/260 8.5% 64227196 NA +4753 chr4 + 190214555 140999920 140999919 141000135 216 AGAGTGAGACTTGGTCTCAAAAAAAGAAGAA-------------GAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGA------AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG---------AAGAAGAAGAAGAAGAAGAAGAA---------------GAAGGAGAAGAAGAAGAAGAAGA--------------------AGAGGAGGAAGAAGAAGAAG-----AAGAAAACAT chr4 - 94230402 27548026 27548025 27548309 66682094 66682093 66682377 284 AGACTGAGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGAACCAAGAAAACAT ...x.....xx....x...::.::.::..:.-------------..:...x..:.....xx..x:...x....x...:..::..:.x.:::.x....:xx......:.....------.....xx...:x.:..xx::.:x....::....:.xx..:.---------..x..:.::....x..:......---------------...:.....:.::x...:.....--------------------...:..::x.....x..:.:-----.......... 31M13I68M6I41M9I23M15I23M20I20M5I10M 147/216 68.1% 284/94230402 0.0% 68/216 31.5% 113451894 76762661 +3186 chr4 + 190214555 140999953 140999952 141000048 96 AGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA chr4 - 94230402 45628604 45628603 45628699 48601704 48601703 48601799 96 AAAAAAAGGGGGATGAGAAAAAAAATAGGAAAAAAAAAAGAAAGTATCTTAAATAAAGGGAAAAAGAGAACTGGAAGAATCAAAGGATGAAGAAAA .:..:...::.:.x:....:..:..x..:.:....:..::....x.xxxx..:x.:.:.:.:..::....xx:......xx.:.:..x......:. 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% 95371349 NA +3887 chr4 + 190214555 140999960 140999959 141000106 147 GAAGAA--GAAGAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAA chr4 - 94230402 44053988 44053987 44054137 50176266 50176265 50176415 150 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA ......--..:..::...........:.:.x.......x::.:..:x.::xxxx:.::.:.::.......x:..:.x...x.x:.....x.::.....x..-.x.:...x:.:x.:.x..::::.::.......:x.:x:...x::.:.. 6M2I93M1I48M 89/147 60.5% 150/94230402 0.0% 3/147 2.0% 96945972 93268583 +3223 chr4 + 190214555 140999974 140999973 141000055 82 AGAAAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 32025570 32025569 32025651 62204752 62204751 62204833 82 AAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAGGTGGA .:..x....x.....:...:..:........::::.::x.:.:........xxxx..:...:x.....x:....x..:x.:. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 108974404 81240151 +3092 chr4 + 190214555 140999977 140999976 141000058 82 AAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA chr4 - 94230402 32025570 32025569 32025651 62204752 62204751 62204833 82 AAAACAGAATAAAAGGAGAGAAAAAGAAGAAAGGAAGACAAAGGAAGAAGATTTTGAGGAAACAGAAGTGGAAGTAGGTGGA ...:x....x.:...:.:....:........::::.::x.:.:........xxxx..:...:x.....x:....x..:x.:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 108974407 81240148 +3216 chr4 + 190214555 141006246 141006245 141006326 81 ATACATACATATATACGTATATATATACATACATATATACGTATATATA--TACACACACACACACATTTCT--CCATTTCTTGG chr4 - 94230402 7596413 7596412 7596497 86633906 86633905 86633990 85 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCTGG .....x.:::...:.x:.:......:...::...:.....:x.:.....--...:...:...:.x....::.--:.x....:... 49M2I21M2I11M 57/81 70.4% 85/94230402 0.0% 4/81 4.9% 133409833 56804722 +3191 chr4 + 190214555 141032004 141032003 141032082 79 GTATGTGTATATATGTATATATATACACACATATATATATAAACATATATATACACACACACACACATACACATACATA chr4 - 94230402 8395792 8395791 8395870 85834533 85834532 85834611 79 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:...:.::..:x.:..:...x:...:..:...::x..x.:xx...:.:.............x.:...x..:x... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 132636212 57578343 +3488 chr4 + 190214555 141032005 141032004 141032076 72 TATGTGTATATATGTATATATATACAC--ACATATATATATAAACATATATATACACACACACACACATACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.......:.:..:...x.:..::.:--......:...::xx....xx...:...............x..... 27M2I45M 54/72 75.0% 74/94230402 0.0% 2/72 2.8% 132636216 57578339 +3422 chr4 + 190214555 141032011 141032010 141032071 61 TATATATGTATATATATACACACATATATATATAAACATATATATACACACACACACACAT chr4 - 94230402 7596420 7596419 7596480 86633923 86633922 86633983 61 TGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .::...::x..:...........::..:....:.........:x...:...:...:.x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 133435591 56778964 +3068 chr4 + 190214555 141078788 141078787 141078846 59 TCAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACAC chr4 - 94230402 70707576 70707575 70707634 23522769 23522768 23522827 59 TTGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC .::..:....x.:.....x.::x.x.x:x..........................::.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 70371212 NA +3076 chr4 + 190214555 141078790 141078789 141078849 60 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACA chr4 - 94230402 70707580 70707579 70707639 23522764 23522763 23522823 60 AGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .:....x.:.....x.::..x.x:x.................:........::..x.x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 70371210 NA +3148 chr4 + 190214555 141078790 141078789 141078847 58 AAAAAAAAAAAAAAAAAAAATATATA-TATATATATATATATATACACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .......x..x.....x...:.x.x.-.x........:.:.....:............. 26M1I32M 48/58 82.8% 59/94230402 0.0% 1/58 1.7% 80099448 NA +3017 chr4 + 190214555 141078792 141078791 141078830 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 71641053 NA +3236 chr4 + 190214555 141078796 141078795 141078860 65 AAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACATACATACATAC chr4 - 94230402 64433200 64433199 64433264 29797139 29797138 29797203 65 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.....:x......x.x.x.:.:.:.........x......:......:..:.:::..::..:. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 76645596 NA +3264 chr4 + 190214555 141078798 141078797 141078926 129 AAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATATACACATACATATATACACATATATATAC chr4 - 94230402 4417332 4417331 4417457 89812946 89812945 89813071 126 AAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATAAAC .....xxx:.:..x..x.:.......:.:.:.:.:...x:x...:..:..::x:x:.x:::....:...xx.x:..:x:.x...........:x...x....::.---..:.x.:..xx.:.....x.. 105M3D21M 77/126 61.1% 126/94230402 0.0% 3/126 2.4% 136661466 53553089 +3115 chr4 + 190214555 141078798 141078797 141078859 62 AAAAAAAAAAAATATATATATATATATATATATATACACACACACACACACATACATACATA chr4 - 94230402 64433200 64433199 64433261 29797142 29797141 29797203 62 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTA .:.....:x...x..x.x.x.:.:.:.........x:.....:......:.....:..::.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 76645598 NA +3524 chr4 + 190214555 141078805 141078804 141078892 88 AAAAATATATATATATATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACA-TACAT chr4 - 94230402 88147187 88147186 88147264 6083139 6083138 6083216 78 AAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-----------CATATATAGGGAGAAGCATATATCAACACTACAT ..:...............:.x.:.:...:.:.............-----------........x:x.x.x:.......xx...-..... 44M11D28M1I5M 62/77 80.5% 78/94230402 0.0% 12/77 15.6% 52931618 NA +3298 chr4 + 190214555 141078809 141078808 141078904 96 ATATATATATATATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATATACACAT chr4 - 94230402 89016090 89016089 89016185 5214218 5214217 5214313 96 ACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCAT .:..x.::..::.:.:.:.::.x.:.:........::..x..:......:::.x..:.:.:.:..x...:x.:::....:..:x..:::.:.x... 96M 56/96 58.3% 96/94230402 0.0% 0/96 0.0% 52062719 NA +3132 chr4 + 190214555 141078815 141078814 141078897 83 ATATATATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.::...x...:::.:x:...:..::..:.x.....xx...:.:.......:.:.:.x...:.x..:x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 132683027 57531528 +3000 chr4 + 190214555 141078817 141078816 141078882 66 ATATATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..:.:.....:.............:x..x:.x..x:.:....:.xx..:.:::.. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 74173970 NA +4392 chr4 + 190214555 141078818 141078817 141078930 113 TATATATATATATATACACACACACACACACATACATACATACATATATATA--TACACACATATATACACATACATATATATACACATACATATATACACATATATATACATAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.::..::....x:.:.....:.:.....x.x:...:x:......::....--.....:x:.....:::x:........x....:.x:...x.x.:......:....x:..x.. 52M2I61M 76/113 67.3% 115/94230402 0.0% 2/113 1.8% 67957716 NA +3451 chr4 + 190214555 141078820 141078819 141078937 118 TATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATATACACATACATATATACACATATATATACATATATATACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAA------GCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.::..::....x..:.....:.:.....x.x------:...:x:..:....::.:.x:..:..:x:..:..:.:x:....:...x...:::x....x.x.:.:....:....x:.. 33M6D79M 69/112 61.6% 112/94230402 0.0% 6/112 5.4% 67957718 NA +3040 chr4 + 190214555 141078821 141078820 141078885 65 ATATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:..::..........:.......:.....:x..x:.x:.x:.:..:...xx:...::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 74173974 NA +3051 chr4 + 190214555 141078823 141078822 141078886 64 ATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x.:.....:.:.::.:x..:.x.:....x.:...::........:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 123558074 66656481 +3398 chr4 + 190214555 141078823 141078822 141078931 109 ATATATATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATATACACATACATATATA---CACATATATATACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:...:.:.............x:x.:.:.::...:x:x:.x.:....::...xx.x:...x:.x.....:...:..x:..x....---....x.:.:xx....... 91M3I18M 71/109 65.1% 112/94230402 0.0% 3/109 2.8% 136661480 53553075 +3120 chr4 + 190214555 141078829 141078828 141078894 66 ATATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .....:::..::.............:...:......x..x:.x..x:::....:.xx.....::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 74173982 NA +4017 chr4 + 190214555 141078830 141078829 141078959 130 TATACACACACACACACACATACATACATACATATATATATACACACATATATACACATACATATATATACACATACATATATACACATATATA------TACATATATATACACACACATATATATACACATATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.....x....x.x..-::..xx:x.:.::::..::....x..:...:.........x.x::..:x:....:.:::...x:.....:x:....------........x....:.x....x.x.:.:...::.... 17M1D76M6I36M 84/129 65.1% 135/94230402 0.0% 7/129 5.4% 67957755 NA +3419 chr4 + 190214555 141078846 141078845 141078907 62 CACATACATACATACATATATATATACACACATATATACACATACATATATATACACATACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:.:.x..:......x..:...........::..:..:...x.......:x...:..::.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 133482434 56732121 +3033 chr4 + 190214555 141078853 141078852 141078916 64 ATACATACATATATATATACACACATATATACACATACATATATATACACATACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x...:...x.:.:.x.:.......:..:::x..:.x.:....x......:........:.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 123558104 66656451 +3205 chr4 + 190214555 141078884 141078883 141078962 79 CACATACATATATATACACATACATATATACACATATATAT----ACATATATATACACACACATATATATACACATATATAT chr4 - 94230402 8395787 8395786 8395869 85834534 85834533 85834616 83 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ..::.:::...:.:.:..:.x....:...x:......:...----....xx...:.........:.:.:.x.....x..:x.. 41M4I38M 55/79 69.6% 83/94230402 0.0% 4/79 5.1% 132683097 57531458 +3408 chr4 + 190214555 141078889 141078888 141078952 64 ACATATATATACACATACATATATACACATATATATACATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x...:.:.:....:.:x..:.x.:....x.....::........... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 123558140 66656415 +3033 chr4 + 190214555 141078911 141078910 141078959 49 ATACACATATATATACATATATATACACACACATATATATACACATATA chr4 - 94230402 7596413 7596412 7596461 86633942 86633941 86633990 49 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATA .....x..::...:.x..:...........:...:....:.x....... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 133482498 56732057 +3049 chr4 + 190214555 141078920 141078919 141078972 53 TATATACATATATATACACACACATATATATACACATATATATGTTTATAAGA chr4 - 94230402 72800657 72800656 72800709 21429694 21429693 21429746 53 TACATATATATATATACACACACATATATAAACCAAAAGAAACGTTTATATGA ..:...:.......................x..xx.x.x.x.:.......x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 68278263 NA +3147 chr4 + 190214555 141142945 141142944 141143018 74 CTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTTGGCCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::........::x...x.xx.x..::....::::.........:......x.:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 122945819 67268736 +3348 chr4 + 190214555 141159511 141159510 141159562 52 TTGTTGTTGTTGTTGTTTTTTGTTTTTGTTGTTTTTTGTTTTTTGTTTTTTT chr4 - 94230402 88613467 88613466 88613518 5616885 5616884 5616936 52 TTGTTGTTGCTGTTGTTTTTGGGGGTGGTTGTTGTTTGTTTTTTGCTTTTTT .........:..........x.xxx.x......x...........:...... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 52546044 NA +3069 chr4 + 190214555 141178227 141178226 141178284 58 AGAGTATGTGTGTGTGTATGTGTGTGTGTGTGTGTGCGTGCGCATGCACACACATGCT chr4 - 94230402 25393256 25393255 25393313 68837090 68837089 68837147 58 AAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCT .:.:.:....::.........:...:.x.......:.:::.:..::.:.....:.x.. 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% 115784971 74429584 +3416 chr4 + 190214555 141217430 141217429 141217501 72 CTGCAACCTCAGCCTCCCAGGTTCAAGCAATTCTCCTGTCTCAGCCTCTCAAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:x.:x..:.::........::x...x.xx.x........:............:.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 123020304 67194251 +3276 chr4 + 190214555 141282427 141282426 141282506 80 CAGCCTCCACCTCCTGGCTTCAAGCAATTCTCCTGCCTCAGCCGCTCGAGTAGCTGGGATTACAGGTGCCCACCACCACG chr4 - 94230402 18197129 18197128 18197206 76033197 76033196 76033274 78 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .....:xx.x..:....x......::x...x.xx.x.......x:..:.........:.:....x...--......:::. 68M2D10M 56/78 71.8% 78/94230402 0.0% 2/78 2.6% 123085298 67129257 +3953 chr4 + 190214555 141358377 141358376 141358539 163 CCCTTCCCAGTTCAAAAATTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCT-TTCTTTCTTTCTTTCTTTTTCTCTCTTT chr4 - 94230402 45185599 45185598 45185750 49044653 49044652 49044804 152 CTCTTCCTAGTCTCAG------TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC-------CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT .:.....:...::x.:------...::.x....x................-...:.:x.:..::..........xx:....:.-------......:x...xx.x::.:..x:.x:..x.:.....xx.:x:.:..-x...:.:x......::.:..:xx..... 16M6D28M1I32M7D46M1I28M 100/150 66.7% 152/94230402 0.0% 15/150 10.0% 96172778 94041777 +3164 chr4 + 190214555 141358384 141358383 141358488 105 CAGTTCAAAAATTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570537 41570536 41570641 52659762 52659761 52659866 105 CAGTTCTGACATATATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ......x:.x..x.x...:x..:x.:x.:...::x:..:...:...............xx..:x:x.xx:::x...:::....:.xxx............xx... 105M 66/105 62.9% 105/94230402 0.0% 0/105 0.0% 99787847 90426708 +3155 chr4 + 190214555 141358464 141358463 141358539 76 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCT----TTCTTTTTCTCTCTTT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .:.:..x.x.:..x......:.xx.:..x.:............:..:.........x...----...:.x..::..x.:. 60M4I16M 55/76 72.4% 80/94230402 0.0% 4/76 5.3% 122369647 67844908 +3233 chr4 + 190214555 141358476 141358475 141358560 85 TTCTTTCTTTCTT-TCTTTCTTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTC chr4 - 94230402 18988810 18988809 18988895 75241508 75241507 75241593 86 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTC ...x..x.::...-.x...:x:.....:.xx.:..x...:..........:........:...x...x.xx...:.x:..:..x.. 13M1I72M 60/85 70.6% 86/94230402 0.0% 1/85 1.2% 122369666 67844889 +3055 chr4 + 190214555 141447413 141447412 141447488 76 GAGGAAAGAAAGAAGAAAGAAAGAAAGAGAAAAAGAAAGAAAGAGAAAG-AAAGAAAGAAAAGAGAAAAACAAAAAG chr4 - 94230402 36691894 36691893 36691970 57538433 57538432 57538509 77 GAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAG .....::..::...x....:....:.:.:x..x..:.:...:...::..-:.....::.....x:.x...:x.:... 49M1I27M 51/76 67.1% 77/94230402 0.0% 1/76 1.3% 104755519 85459036 +3095 chr4 + 190214555 141450758 141450757 141450841 84 AAAAGA-GTAAAACAGCAGACCCTAAACATCTGGTGTTTTTTTTTTTGTTTTTTGTTTTTTTTCCTTCC---TCCTCTTCTTTGTCCT chr4 - 94230402 78870600 78870599 78870687 15359716 15359715 15359803 88 AAAGGATGTAATTCAGAAAACTAGATACATTCAGTGTTTTTTTTTTTGTTGTTTGTTTGTTTTTTTTTCCAGTTCAATTCACTATCCT ...:..-....xx...x.:..:xx.x....:::.................x.......x....::..:.---.:.xx...x:.:.... 6M1I62M3I16M 61/84 72.6% 88/94230402 0.0% 4/84 4.8% 62580158 NA +3374 chr4 + 190214555 141514829 141514828 141514921 93 GCAACAG-AGTAAGACTCCATCTCAAAAAAAAAAAAAAAA-AAAAAAAAAAGGAAAGGAAAGAAAGGAAAAAAGAAAAAAATGTTTTGAAAAGAA chr4 - 94230402 51372937 51372936 51373031 42857372 42857371 42857466 95 GCTACAGTAGCTAAATGTCATTTCAAAGAGAGCAGAAAAATACAAAAAGAAAGAAATTCAAGAAATAGAAAAAGAAACAAATATTTTTAAAGCAA ..x....-..:x.:.:x:...:.....:.:.:x.:.....-.x.....:..:....xxx......x::.........x....:....x...:x.. 7M1I32M1I54M 66/93 71.0% 95/94230402 0.0% 2/93 2.2% 90141892 NA +3115 chr4 + 190214555 141514833 141514832 141514890 58 CAGAGTAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGGAAAGAA chr4 - 94230402 32280597 32280596 32280654 61949749 61949748 61949806 58 CAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAA ..:.....:.x....::xx..........:...:...:....:...x.xx........ 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 109234236 80980319 +3037 chr4 + 190214555 141514847 141514846 141514904 58 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGGAAAGAAAGGAAAAAAGAAAA chr4 - 94230402 88558241 88558240 88558298 5672105 5672104 5672162 58 ATCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAA ..........:.x.................:..x::..:::.:::x:.:....x.... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 52956606 NA +3019 chr4 + 190214555 141514848 141514847 141514918 71 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGGAAAGAAAGGAAAAAAGAAAAAAATGTTTTGAAAA chr4 - 94230402 37425228 37425227 37425298 56805105 56805104 56805175 71 TCTGAAAAAAAAAAGAAAAGAAAAAGAAATAGACAGTGGAGTAGAAAATTAAGGAGTAGATATTTTTAAAA ...x..........:....:.....:...x:..x..x::..x.:::..xx...:.:x.:..:....x.... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 104089620 86124935 +3369 chr4 + 190214555 141544958 141544957 141545126 169 ATCACATTGTCTTCTATTTTGCCTTGAAAGTAAACATCAATACTCAGGGAAAAGAAAAACAAAACCACAATTTCTGGATAAAATGTAAAATGTCACTAAAGACTTTAATTAACAGGAAACCCTTCATGTGAAAATAGGGTGCTTCAAACT---TATTTTTATTACCCATTAA chr4 - 94230402 3735576 3735575 3735731 90494672 90494671 90494827 156 ATCACATTTTCCTACATTCCCCTTTGATAGGGGCAGACAATACTCAGGGAAAAACAAAACAAAACCAAAAC---------AACCATAGAAT-----TAAAGGGCAGAACATACAGAGAGATTCTCTTTCAAAGATA--ATGTTTTAAAATGAATGGTTTTCTTTCCTATTGA ........x..:.x:...::x.:....x..x::xx:x................:x............x..:---------..x::..:...-----.....:x:xx..:xx....::.:x:::..x.x::..:...--:..:..:...x.---.:x....x..x..:...:. 71M9D11M5D40M2D12M3I19M 99/153 64.7% 156/94230402 0.0% 19/153 12.4% 137809382 52405173 +3460 chr4 + 190214555 141555988 141555987 141556150 163 ATTGAATTTAAACAGTGCCTGAGTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACCGGGTCCCGCTCAGTCGCCCAGGC-------TGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGACACCTCTG-CTTCCTGGGCTCAAGCCATTCTCCT chr4 - 94230402 34811774 34811773 34811919 59418484 59418483 59418629 146 ATTGAATTT--------CATAAGCTTTTTTTGGTTTCTTTTTTTTTTTATTCCTTTCTTATTTCTGA-------------TCACTTTCCCATCCTCCTCTTTCACTGAAG----GAAGTGTAATTTCATGGTACTGAAACCAATGTCTTGTCAGGCTCAAAAAAGGCTCCT .........--------.x.:..:............:...........x..::...:..x...:...-------------...x.:x....xx.-------.x:...:..----.x:...:...:...xxx:.....x...xx..-...x:::.......:xx.xx..... 9M8D50M13D14M7I9M4D31M1I25M 100/138 72.5% 146/94230402 0.0% 33/138 23.9% 106744214 83470341 +3227 chr4 + 190214555 141556822 141556821 141556881 60 ATTTGAATGTGTGTGTGTATATATATATATATACACACACACAGATACACACACACACAC chr4 - 94230402 14964825 14964824 14964884 79265519 79265518 79265578 60 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..x..xx..:.....:::.::.:...:........xx......x..:............. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 126591997 63622558 +3028 chr4 + 190214555 141556835 141556834 141556891 57 TGTGTATATATATATATATACACACACACAGATACACACACACACACATATATATGA chr4 - 94230402 72800653 72800652 72800709 21429694 21429693 21429750 57 TGTTTACATATATATATATACACACACATATATAAACCAAAAGAAACGTTTATATGA ...x..:.....................:.x...x..xx.x.x.x..:.x....... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 68756182 NA +3064 chr4 + 190214555 141556838 141556837 141556889 52 GTATATATATATATATACACACACACAGATACACACACACACACATATATAT chr4 - 94230402 85546027 85546026 85546078 8684325 8684324 8684376 52 GTAGCTATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ...xx...x........:...................:.x.xx:....:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 56010811 NA +3457 chr4 + 190214555 141560089 141560088 141560155 67 TAACAACAACAACAACAAAAACCAGTATGAATGAGTGAAAGTGAGACAAAAAAAGAAAGGTAGCCAA chr4 - 94230402 12500310 12500309 12500376 81730027 81730026 81730093 67 TAAAAACAACAACAACAAAAAACAGTACGTATGAAAGAAACTGACAAAAAAAAATTAGGATGATCAA ...x.................x.....:.x....:x....x...x.x.......xx.:.:.:::... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 129059779 61154776 +4072 chr4 + 190214555 141579954 141579953 141580095 142 ATTCTCTCTCTTT------TCTTTTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT----CTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45185592 45185591 45185743 49044660 49044659 49044811 152 ATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...:..:.....:------..xx......x:...x........:..::..:x...:.:x.:..::..........xx:....:.:..::.:x:..----...:..x:.x:..x.......xx.:x:::..xx.:::..x..::.....:.:. 13M6I76M4I53M 90/142 63.4% 152/94230402 0.0% 10/142 7.0% 96394362 93820193 +3063 chr4 + 190214555 141579964 141579963 141580045 82 TTTTCTTTTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTT--------TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570552 41570551 41570641 52659762 52659761 52659851 90 TTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ....x...x..x..:....x::...:.:...............xx..:x:--------...:::....:.xxx............xx... 50M8I32M 59/82 72.0% 90/94230402 0.0% 8/82 9.8% 100009412 90205143 +3105 chr4 + 190214555 141579972 141579971 141580181 210 TTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTT----TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTC-----TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTT chr4 - 94230402 2458495 2458494 2458708 91771695 91771694 91771908 214 TCTCACTTATCTTCAGCACCTCTACTCATTTTTCTTACTCTTAAAATGTATTTTCCCTTTTTTCCCCTATATTTTCTTCTTCAGCTTTCTCCTCATTCTTTACTTGTCCTCATCTGTTCTTTCCTCCATTTGCTCACAGACTGCTCTCTCCTGTTCCTACTGT-----TCCTGTGCATTTTCTCTCAGCACCTTCCCGTCTTCATTATTCTTCCATTTT .:..x...x::...xx:x:..:.x:.:x...:.:.:x:....----.x.x.:..:.:..:....::::x.x:......:.::xx....:..:.:x..::.:x:.:x.::..x.::x.......:.:.x..:x:..-----:.x..:...:::x...:.x..x.-----.:.:x.x.x:.....:..xx:x:...:.:x.:...x..x.....:.x.... 42M4I89M5I23M5D51M 114/205 55.6% 214/94230402 0.0% 14/205 6.8% 139121477 51093078 +4621 chr4 + 190214555 141579986 141579985 141580151 166 TTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCT----------TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTT chr4 - 94230402 45185576 45185575 45185751 49044652 49044651 49044827 176 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ...x.x:..x..x..:x:....::....:..xx::.:xx..:.:.x:...x................x....::x:......::..::...xx:.::.::......----------....:x..x::.x.......xx.:x:.::.xx.:::..x...:.........xx.::... 106M10I60M 103/166 62.0% 176/94230402 0.0% 10/166 6.0% 96394410 93820145 +3052 chr4 + 190214555 141580009 141580008 141580165 157 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTC chr4 - 94230402 38122957 38122956 38123113 56107290 56107289 56107446 157 TTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCTC ..::.:.....:.x:..::...:.....x::.:.x:x:..x.xx..:x..xx:..x::::x...::x..:.:..:.:x:.x:.:..:.:.x.x..:.::.x..x.x...:::x:x.x.......:.:.x...:..:....:x:.x.x....::::.. 157M 83/157 52.9% 157/94230402 0.0% 0/157 0.0% 103457052 86757503 +3128 chr4 + 190214555 141580034 141580033 141580115 82 TCTTTCTTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 53118144 53118143 53118225 41112178 41112177 41112259 82 TTTATCCTCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTTCCT .:.x..:.:....x:.:...x.x.::........:.x...x.xx..:..:.x....x...x...x..x......:::..:.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 88461890 NA +3162 chr4 + 190214555 141580040 141580039 141580115 76 TTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ...:....:..:.x......:.x.xx.xx..:.:..x:x..::..:.::.:............::.:......x.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 85428490 NA +3422 chr4 + 190214555 141580040 141580039 141580130 91 TTTCTTTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 35294589 35294588 35294681 58935722 58935721 58935814 93 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC ....:.:.:....::..x.x..x.....::...:...x.......x:....:...--:...x..:..:...xx.:x..x.:..::.:..x... 55M2I36M 62/91 68.1% 93/94230402 0.0% 2/91 2.2% 106285451 83929104 +3035 chr4 + 190214555 141580045 141580044 141580097 53 TTTCTTTCTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 60073514 60073513 60073566 34156837 34156836 34156889 53 TTTCTCTCCTTTTCTTTGTTTCTCTTTCTTGTGCTCCTTTTATTTAATTCTTT .....:..:........x............x.x..:::...x...xx...... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 81506531 NA +3188 chr4 + 190214555 141580052 141580051 141580179 128 CTTTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTT chr4 - 94230402 23468146 23468145 23468273 70762130 70762129 70762257 128 CTTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ......xx.x.:..:.:...:......:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx..::.x.:x.:.:.:x...:..:x..:......x..x:...:.:.::. 128M 75/128 58.6% 128/94230402 0.0% 0/128 0.0% 118111906 72102649 +3308 chr4 + 190214555 141580104 141580103 141580193 90 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTTTC chr4 - 94230402 8439372 8439371 8439461 85790942 85790941 85791031 90 TTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTTC ....xxx.....::.:x.x..::x....:.....x:.:::..::.:.:..:.....:....:..........:xx.:.xx....:::... 90M 57/90 63.3% 90/94230402 0.0% 0/90 0.0% 133140732 57073823 +3102 chr4 + 190214555 141580125 141580124 141580198 74 TCTTTCTTCCTTTCTCTTTCTTTCTTTTTCTTTCTCTTTTCTTTCTTCTTTCTTTTTTTTCTTTCTTTCCTTCT chr4 - 94230402 22629304 22629303 22629377 71601026 71601025 71601099 74 TTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .:..::...:.....:.:x:x...x.x...x.........x..:x..:x......x:..:...:..:..:.:.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 118950821 71263734 +3113 chr4 + 190214555 141591131 141591130 141591187 57 CACAAAT--------GTGCGCACACGCGCGCGCACACACACACACACACACACACACACACACAC chr4 - 94230402 14964820 14964819 14964884 79265519 79265518 79265583 65 CACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .......--------...:.......:.:::.:.:.:...xx........::............. 7M8I50M 45/57 78.9% 65/94230402 0.0% 8/57 14.0% 126626311 63588244 +3091 chr4 + 190214555 141599398 141599397 141599447 50 GGGAATATATATATATATATATATATAATGAGTGTAAATACTCAGTCATA chr4 - 94230402 73028607 73028606 73028656 21201747 21201746 21201796 50 GGGAATATATATATTTATATATGTATAATTGTTGCAACTTCTCAGTCACA ..............x.......:......x:x..:..x.x........:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 68570791 NA +3169 chr4 + 190214555 141666432 141666431 141666504 73 TGCAGCCTTGACCTCCGGGACTCAGGTGATCCTCCCATCTCAACCTCCTGAGTAGCTGGAGCTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.....:x:.x..:.x..::...:...x.:.x.xx:x....:...::::..........:.....x...... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 123469305 66745250 +3331 chr4 + 190214555 141682934 141682933 141682989 56 AAAGCGAGATTCCATCTCAAAAGAAAAAACAAACAAACAAACAAAAAACAATAGGG chr4 - 94230402 30786385 30786384 30786440 63443963 63443962 63444018 56 AAAACAAAATTTCATTTCAGAGCTGGAAACAAACAAACAAACAAAAAACTATGGGG ...:.:.:...:...:...:.:xx::.......................x..:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 110896549 79318006 +3045 chr4 + 190214555 141740536 141740535 141740581 46 CTCTATCAAAATAGAAATATTATTCTTCTCAGAAACAGAAAAAAAA chr4 - 94230402 21688284 21688283 21688329 72542074 72542073 72542119 46 CTCTATAAAAACAGAAAAATAATTCTTCTTAAAAACAGAAAAACAA ......x....:.....x..x........:.:...........x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 120052252 70162303 +3032 chr4 + 190214555 141755666 141755665 141755717 52 AAAAAACAAAAAAAAAAACAAAAAAAAAACAAAAAAAACAAAGAAAGATAAA chr4 - 94230402 64558420 64558419 64558471 29671932 29671931 29671983 52 AAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAATAAA ..........x...x.............x.....x..:::x.x...:..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 77197246 NA +3829 chr4 + 190214555 141769954 141769953 141770145 192 CTGCTTTCCACCTGTCCTCTTCCCTTTTTCTTTCACTCCTTCCCTCCCTCCCTCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCT---CCCTTCCTTCCTT--CTTTCCTTCCTTCTTTCTTTCCTTCCTTCCTTCTTTCCTTTCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTCCTTTTGTCTATCA chr4 - 94230402 59424941 59424940 59425134 34805269 34805268 34805462 194 CTGTTTTCC-TCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTC--TCCTTCATTAAAGCTGTCA ...:.....-:...:.:........:x..:.:..x:.:...:xx:x.:..xx.:..::.x.x::.:x..:.....:.:x::.:x.....---.::...:..:.x.--:..x:.x.:.x.x:::.x..::.:x.x.::..:.....:...:..x..:.....:x.::..xx....:.--..:...x..xx:x..:... 9M1D79M3I13M2I69M2D19M 111/189 58.7% 194/94230402 0.0% 8/189 4.2% 82345013 NA +3044 chr4 + 190214555 141770071 141770070 141770153 83 TCTTTCCTTCCTTCCTTCTTTCCTTTCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTCCTTTTGTCTATCAGTCCTTTT chr4 - 94230402 54635348 54635347 54635429 39594974 39594973 39595055 82 TCTTTTTTCTTTTTCTTTTTTTTTCTCACCC-CCTCCCCTCTCCCCTTGAATTTCTTTTCTCCTTTTGCCTATGAAACTATTT .....::.:::..:...:...::.:..x:..-...:.....:.:..:.xxx.::...:.:........:....x.:x.:x... 31M1D51M 53/82 64.6% 82/94230402 0.0% 1/82 1.2% 87134723 NA +5258 chr4 + 190214555 141780963 141780962 141781129 167 TGAGAGGATGCACACAGGTGGGCCAGGGCCCATGGCCGTCAATTTAAGGGCACACTTTCATTTTCAATGTAATTAACTGTCTAATTGAGCATCCAAATTTAGCAGTGA-ATTTGCATGTGCAATTAATTATGATTTAAAAGCACTCTGCAT------------TAATGGTTTCTTTCCCA chr4 - 94230402 64130137 64130136 64130309 30100094 30100093 30100266 173 TGAATGGAAGCAGCCAGGCAGGCTGGGGGA-GTGGCCATCAGTTTATGCACACAACTGCATTTTCAACATAATTAGCTGTCTAATTGAGCATTATAATTTAACTGACACATTTAAACATGTAAT------TTATTTGAATGCATGCTGCTTGTAATCTGTTTATAATGTTTTCCTCTTCA ...:x...x...xx....::...::...xx-:.....:...:....x.x:....x:.x.........::......:................:xx......:.x.xx.-....:x.::..:...------.x....:..x...:x....x.------------.....x....:.:::.. 30M1D77M1I15M6D21M12I17M 114/160 71.2% 173/94230402 0.0% 20/160 12.5% 77650826 NA +3182 chr4 + 190214555 141791452 141791451 141791553 102 GGAAATGAATATTATCCTTCTTTTATAGATGAAGAAGTTGAGGCACAGAGAGGTTAAGCAATTTGCCTAGGGTAACATATCTAGTAAATGGTAGACCTGATA chr4 - 94230402 15193212 15193211 15193313 79037090 79037089 79037191 102 GAAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTTATA .:....x.x....x...x:x.......xx..:..:.:....::.x....x.::.x..::..:..x....:...x.:.:.x..x..x.:x::..:.x:.x... 102M 64/102 62.7% 102/94230402 0.0% 0/102 0.0% 126598240 63616315 +3052 chr4 + 190214555 141828403 141828402 141828459 57 AAATATATATGCATATATGTATGCATATATATATATATGTAAGATTTAAGCAGAATA chr4 - 94230402 60962207 60962206 60962263 33268140 33268139 33268196 57 AAATAAGTAAACATACATGTATGTATACATATGTATACATAAAAATTGGGCAGCATA .....x:..x:....:.......:...:....:....::...:.x..::....x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 80866196 NA +3146 chr4 + 190214555 141894445 141894444 141894520 76 ATTTTATTTCTTTATTTAT-TTTTACACTGGGTTATCAGACCGTCTAATTTTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 - 94230402 14581352 14581351 14581427 79648976 79648975 79649051 76 ATTTTGATTTTCTATTGATATTTCAAAATAACTTA-AAAACCCTTCAGTTTTTTTTGTTGTTGTTGTTTGTTTGTTT .....:x..:.:....x..-...:.x.x.::x...-x.:...x.::.:.....x....................... 19M1I15M1D41M 57/75 76.0% 76/94230402 0.0% 2/75 2.7% 127313093 62901462 +3269 chr4 + 190214555 141894476 141894475 141894528 53 TTATCAGACCGTCTAATTTTTGTTGTTGTTGTTGTTTGTTTGTTTGAGGCAGA chr4 - 94230402 4471991 4471990 4472043 89758360 89758359 89758412 53 ttaaaaaattGTTCAATTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCAGA ...xx.:.::..::................................xxx.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 137422485 52792070 +3839 chr4 + 190214555 141902102 141902101 141902341 240 ACAAATTATAAAAGTAGATATGCTGCAAGAAATT----CAAGAAATGACAGATGTGGAAACCTTTACATAGGAAATCACTAAGTACAAAAGATAAGAAAGATGAAGCCAAGAATGAGACTAGTACTGAGAAAGCATGGAGTGAAACACATATATATACATATACACATATATATTGTATGTAGAGGTGTATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATAGT chr4 - 94230402 70982454 70982453 70982684 23247719 23247718 23247949 231 ACAAGCAACAAAAATAGATGTCCCTTAAAAAACTATTCCATCAAGTCCCAG-TGTAGTGCACTTCATTAAGACAAACA--AAATCAAAATCATAAGCA-GATAAAGCAGATAGC-AGATTACTACTACAATTGGAGGTAGGCTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTG--------TGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGT ....::x.:....:.....:.x.:x:..:...:.----..xx..:.xx...-...:.x:xx...:.:xx..:x..x..--..:.xx...xx.....x.-...:....x:.x.::-...:..x....:x:.xx.x.x.x..xxx.x:x..........:x...x..::..xx.x..x.x:x.:--------.........:........:....:.x:...x..:.:.:.::...:.:.:..:.. 34M4I13M1D26M2D18M1D15M1D67M8D54M 142/227 62.6% 231/94230402 0.0% 17/227 7.5% 70919648 NA +6107 chr4 + 190214555 141907203 141907202 141907354 152 AAAACACAGCAGATGTACTTTGCATTGAATAAAGACTACACATCCTCCTT--AATCACC---ACCTTTCCTTTTTATGGAGTAAGTGTGAATTATTGTCAGTTTCATCATTTGTAATCAGTGGCTGAAACAGATGCTGAAGGTTTAGTTTAAAATGA chr4 - 94230402 84927606 84927605 84927759 9302644 9302643 9302797 154 AAAACATAACAGATGAAGGCTGCCTTGCATAAGGAACACACACATGCATTTAAATCACTTATATTTTACTTTTTTATGATGCAATTGTGAATTGT-GTTATTTT--GCATTTGTAATTAGAGGTTGAAACAGATGGTAAAGGCTTGGTTTAAAGTGA ......:.:......x.xx:...x...x....:..x:.....:x:x.x..--......:---.::..x.:........:x.:..x........:.-..:.x...--x..........:..x..:...........x.:....:..:.......:... 50M2I7M3I33M1D8M2D51M 112/149 75.2% 154/94230402 0.0% 8/149 5.4% 56979597 NA +3178 chr4 + 190214555 141942025 141942024 141942080 56 CTGAAAAAAAAAAAAAATATATATATATATATATATATATACACACATACATATAT chr4 - 94230402 71167186 71167185 71167241 23063162 23063161 23063217 56 CTGTAAAAAAAAAAAAATACACACACACACATATATATATATATAATTACAAGTAT ...x...............:.:.:.:.:.:...........:.:.xx....x:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 70774839 NA +3070 chr4 + 190214555 141942076 141942075 141942152 77 TATATATATATAAATATACATACATATATATATACATACATATATATATATAAATATACATACATATATATATACAT chr4 - 94230402 52481236 52481235 52481312 41749091 41749090 41749167 77 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT ..:..:x......:::.....::..:....:....::.....:xx.....x.xx....::.:::.x......xx... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 89460840 NA +3113 chr4 + 190214555 141942120 141942119 141942190 71 TATATATAAATATACATACATATATATATACATACATATATATATATATACACATACATATATATATATAT chr4 - 94230402 52481236 52481235 52481306 41749097 41749096 41749167 71 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATAT ..:..:x.x...x:.:.....:...:.........::.:...:xx.....x..x..:..:.:.:.x..... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 89460884 NA +3302 chr4 + 190214555 141948548 141948547 141948607 60 TTTTGTCTGTGTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982622 70982621 70982681 23247722 23247721 23247781 60 TTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ....x::....................:....:.x:...x..:.:.:.::...:.:.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 70965926 NA +3236 chr4 + 190214555 141956636 141956635 141956706 71 TATATATATGTGTATATATA-------------TGTGTGTGTGTATATGTATTTATGTATATATATGTGTGTGTATATATATAT chr4 - 94230402 70982598 70982597 70982681 23247722 23247721 23247805 84 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .........x.:.x:..:..-------------.........:.:.:....:x.....x:...x.........:...:.:.:.. 20M13I51M 54/71 76.1% 84/94230402 0.0% 13/71 18.3% 70974038 NA +3196 chr4 + 190214555 141956678 141956677 141956733 56 TGTATATATATGTGTGTGTATATATATATATATATTTTTTCTCTTTTTCTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x...:...:....:.:..........x....:.x.:.....:.:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 49221330 NA +3188 chr4 + 190214555 141956680 141956679 141956734 55 TATATATATGTGTGTGTATATATATATATATATTTTTTCTCTTTTTCTTTTTTTT chr4 - 94230402 92735348 92735347 92735402 1495001 1495000 1495055 55 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT .::....x.:.:...:.:..:.:.................x.....:...:.x.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 49221332 NA +3029 chr4 + 190214555 141957210 141957209 141957253 44 ATAGCTTTTGTTGTTATTGTTGTTGTTATTTGTTTTTTATTTTT chr4 - 94230402 66916762 66916761 66916805 27313598 27313597 27313641 44 ATGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTT ..:.:....x.....:...........x.:........:..... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 75040448 NA +3025 chr4 + 190214555 141990797 141990796 141990881 85 TTAAACTCTGTTTTATCAGAGACTAGGATTGCAACTCCTGCATTTTTTTTTTTTTTTTTTTGCTATTTGCTTGGTAGATCTTCAT chr4 - 94230402 60868503 60868502 60868587 33361816 33361815 33361900 85 TTGAATTCTATCCTAGCAGGATTTCAGGTCGAGGCCAGAGCACTCTTTTTTTTTTTTTTTTTTTGTATGGTTGTTGGCTCTTCAT ..:..:...:.::..x...::x:.x:.:.:.x::.:xxx...:.:................x:.:.x..x...x.:.x....... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 81122294 NA +3258 chr4 + 190214555 141993836 141993835 141993890 55 TCTGTTCTGTGTTTTAGTTGTTGTTGCTGTGT-TCCTCTTTTTCTCTTTCTCTTTC chr4 - 94230402 3484462 3484461 3484517 90745886 90745885 90745941 56 TCTGTTCTGTACTTTAGTTGTTGCTGTTGTTTGTCTTTTTTTTTTTTTTCTTTCTC ..........::...........:..:...x.-..:.:.....:.:.....:.:.. 32M1I23M 44/55 80.0% 56/94230402 0.0% 1/55 1.8% 138509374 51705181 +3009 chr4 + 190214555 142010069 142010068 142010109 41 TGCTTTGAGTAGTATGGATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 85992217 85992216 85992257 8238146 8238145 8238186 41 TGCTTTTAGGAGCATGGATTTTTCTTTTTCTTTTTTTTTTT ......x..x..:..........:.....:........... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 56017852 NA +3658 chr4 + 190214555 142026542 142026541 142026623 82 CTGCAACCTCCGCCTCCGGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACACGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..:xx:x..:.x.........:.x...x.xx.x........::...........:.:........-----...... 71M5D6M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 123829416 66385139 +3420 chr4 + 190214555 142040090 142040089 142040196 107 CAGAAAAGAAAAAGAAGGGAGAAGTGGGGGAAGAAGAGGA-------GGGAGGAAGGAGAGGGAGAGACAAACACAGATACAGCAGTGACAGGAGAGAAGACAAGGGGCAGTGT chr4 - 94230402 92014721 92014720 92014834 2215569 2215568 2215682 114 CGGGAAAGAGAAGAGCAGGAACGAAAGGAGTTGCAAAGGATGCTTTTGGGAGAAGACAGTGGGAATGACAAAGACAGGGGCAAAAAGGACAGGAGAGACAAAAAGGGGCTGTGT .:.:.....:..:::x:...:x::x:..:.xx.x.:....-------.....:.::x..x....:x......x....:x:..:x.:x...........x:.x.......x.... 40M7I67M 69/107 64.5% 114/94230402 0.0% 7/107 6.5% 50025369 NA +3045 chr4 + 190214555 142048500 142048499 142048553 54 AAAGATGACAACATTAAAAAAGAGAGAAAAAGAAATAAAGAGAGGCAAGGGTTT chr4 - 94230402 48654503 48654502 48654556 45575847 45575846 45575900 54 AGGGATGAGGACAGTGAAAAAGAGTGAGAGAGAAGTGAAGAAAGGCAAGAATTT .::.....x:...x.:........x..:.:....:.:....:.......::... 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 93393997 NA +3241 chr4 + 190214555 142061818 142061817 142061921 104 AATGTCATATATAAATG--------CATATATGTACATATATACATATATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4481654 4481653 4481764 89748639 89748638 89748749 111 AGTGTCCGATAAAAATGACAGGGACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT-TATCTAGGTAT .:....xx...x.....--------::...:...x:x:.....x:.:.:.:.....:....x...:.....:x......:x:xx.:......:..:.:..-...x..x:... 17M8I75M1D11M 70/103 68.0% 111/94230402 0.0% 9/103 8.7% 137580164 52634391 +3139 chr4 + 190214555 142061825 142061824 142061894 70 TATATAAATGCATATATGTACATATATACATATATATATGTACACACACACACACACACACATATATATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::.....::::...x.::.:..:...:.x..:..xx..::...............x.....x..:x... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 133666024 56548531 +3477 chr4 + 190214555 142061833 142061832 142061907 75 TGCATATATGTACATATATACATATATATATGTACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 88147180 88147179 88147253 6083150 6083149 6083223 74 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATAGGGAGAAGCATATAT .:...:..x.x.:.......:....:.x.:....::.:.............-........x:x.x.x::...... 51M1D23M 55/74 74.3% 74/94230402 0.0% 1/74 1.4% 53914653 NA +3220 chr4 + 190214555 142061833 142061832 142061941 109 TGCATATATGTACATATATAC---------ATATATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417317 4417316 4417434 89812969 89812968 89813086 118 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .:...::x...x....x.x..---------.x.:......::...........x:x...:..::..:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 21M9I88M 71/109 65.1% 118/94230402 0.0% 9/109 8.3% 137644516 52570039 +3184 chr4 + 190214555 142061846 142061845 142061937 92 ATATATACATATATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.........:.:::.......x:x...:..:..::x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x..... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 137644503 52570052 +3348 chr4 + 190214555 142061848 142061847 142061969 122 ATATACATATATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTGTAACTTTGGTCTCCAAAGCAAGTAA chr4 - 94230402 4417343 4417342 4417464 89812939 89812938 89813060 122 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAA ..x..x.:.......:::.........x:x...:..:...:x:x:.x.::.:..:...xx.x::..x..x.....:.:....x...x.....::.xxx...x:.:::x.x:...x::..:.. 122M 73/122 59.8% 122/94230402 0.0% 0/122 0.0% 137644505 52570050 +3457 chr4 + 190214555 142061853 142061852 142061919 67 CATATATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .......:..:...........:..............x..x:.x:.x:.:....:.xx:...:::.. 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 75157007 NA +3992 chr4 + 190214555 142061855 142061854 142061941 87 TATATATATGTACACACACACACACACACACATAT--------ATATATATATATA----------------TATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 21704674 21704673 21704784 72525619 72525618 72525729 111 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTAT .............................:::...--------...x..:.:x..:----------------.x....:..:x.....x.x..........:.....:... 35M8I13M16I39M 71/87 81.6% 111/94230402 0.0% 24/87 27.6% 120357181 69857374 +3992 chr4 + 190214555 142061855 142061854 142061941 87 TATATATATGTACACACACACACACACACACATAT--------ATATATATATATA----------------TATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 21701101 21701100 21701211 72529192 72529191 72529302 111 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTAT .............................:::...--------...x..:.:x..:----------------.x....:..:x.....x.x..........:.....:... 35M8I13M16I39M 71/87 81.6% 111/94230402 0.0% 24/87 27.6% 120360754 69853801 +3104 chr4 + 190214555 142061858 142061857 142061923 66 ATATATGTACACACACACACACACACACATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..........::.........:.......:.:....x..x:.x:.x:.:....:.xx:...:::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 75157011 NA +3054 chr4 + 190214555 142061866 142061865 142061909 44 ACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372750 87372749 87372793 6857610 6857609 6857653 44 ACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...........x..........x....::...:..::....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 54689116 NA +3203 chr4 + 190214555 142062727 142062726 142062803 77 CTCCGTCCCCCCGCAAAAACAAACAAACAAACAAACAAACAAACAAACAGACAAACAAACACAAA------------AAAACTTTTTTA chr4 - 94230402 64558407 64558406 64558495 29671908 29671907 29671996 89 CCCCCTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAATAAATATCTCTCTGTGAAAGCTTTTTCA .:..x.......xx.....................x...x.xxx.....::::x.:...x.:...------------...:......:. 65M12I12M 58/77 75.3% 89/94230402 0.0% 12/77 15.6% 77504320 NA +3080 chr4 + 190214555 142081965 142081964 142082017 53 AAAAAAAAAATAAAAACAACTCAAAATGACCTTAAAAGAAAAAAACTTGAAAA chr4 - 94230402 39831008 39831007 39831060 54399343 54399342 54399395 53 AGAAGAAAAATAGAAACAACTAAAGTTGAGGTTAAAAGAAAAACATTTGAAGA .:..:.......:........x..:x...xx............x.:.....:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 102250957 87963598 +3339 chr4 + 190214555 142098323 142098322 142098446 124 GTTTTTATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAAAAACTAACAACATTGGGGGTTACTGGAAGAGTTTTAGGAGACACATAATGAGACTTTCATTTTAAAACAGTCACTTT chr4 - 94230402 83815179 83815178 83815280 10415123 10415122 10415224 102 GTTTTTGTTTAAAAAACAAACAAACAACAACAACAAC----AAACTCAACCCAACAACTTTAAGTCAGACTTCAAAAG------------------GAAACTCTAATTTTGGAATAGTTAATCT ......:..:x:.........................----...xxx..x.:......x..::.xxxx...xx..:..------------------..:...:.x.....::..:...:.x.:. 37M4D37M18D28M 74/102 72.5% 102/94230402 0.0% 22/102 21.6% 58283144 NA +3520 chr4 + 190214555 142098324 142098323 142098436 113 TTTTTATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAAAAACTAACAACATTGGGGGTTACTGGAAGAGT-TTTAGGAGACACATAATGAGACTTTCATTTTAAAA chr4 - 94230402 15430282 15430281 15430388 78800015 78800014 78800121 107 TTTTTCCTCAGGAAAAATACAAATAACAACAACAACAACAAAAAAAAAACACACACAGAAGAGTGAAAATAGAGCACTATTTAAGAAGAACACATTGGG-------TTTTAAAA .....x:..x.:...x.x.....:..........................xx...xx:xx.:.x.xx.x.:..:x.x.-....:..::x...:.x..:.-------........ 78M1I20M7D8M 76/106 71.7% 107/94230402 0.0% 8/106 7.5% 126668042 63546513 +3024 chr4 + 190214555 142098327 142098326 142098372 46 TTATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAAAAA chr4 - 94230402 47366530 47366529 47366575 46863828 46863827 46863873 46 TCATGTTGGAAACAAACAAACAACAACAATAAAAACACAAGAAAAA .:..x:..:....................:..x....x..:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 94731797 NA +3102 chr4 + 190214555 142098329 142098328 142098406 78 ATTCTGAAAACAAACAAACAACAACAACAACAACAAAAAAAAAACTAACAACATTGGGGGTTACTGGAAGAGTTTTAG chr4 - 94230402 59682663 59682662 59682740 34547663 34547662 34547740 78 ATTCCCTAAATAAATAAACAACAACAACAACAAAAAGACTAAATACAACTGTATGATTGGTTAGTAGGAGAATTCCAG ....:xx...:...:..................x..:.xx...xx:...x::..x:xx.....x.:.:...:..::.. 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 82415666 NA +3129 chr4 + 190214555 142098334 142098333 142098409 76 GAAAACAAACAAACAACAACAACAACAACAAAAAAAAAAC-TAACAACATTGGGGGTTACTGGAAGAGTTTTAGGAG chr4 - 94230402 50307476 50307475 50307548 43922855 43922854 43922927 73 GAAAATAAACAAACAACAACAACAATAAATAAAAAAAAACATCATGGCATTGA----CCTAAAAAGAGATTTGGGAG .....:...................:..xx..........-.x.:::.....:----:x:x::.....x...:.... 40M1I12M4D20M 55/72 76.4% 73/94230402 0.0% 5/72 6.9% 91790858 NA +3035 chr4 + 190214555 142098336 142098335 142098369 34 AAACAAACAAACAACAACAACAACAACAAAAAAA chr4 - 94230402 79230840 79230839 79230873 14999530 14999529 14999563 34 AAACAAACAAACAATAACAACAACAACAAAAAAA ..............:................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 62867496 NA +3262 chr4 + 190214555 142119810 142119809 142119856 47 CACACACACACACACATACACATATATATACATATATACGTATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.:.....:..x.....:...:........... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 54747063 NA +3208 chr4 + 190214555 142119866 142119865 142119954 89 ATATATATACATATATACGTATATATACGTGTGTATATATATGTATATATATAGAACTCATTACCTAAACCCAACTTACAAATATTTCC chr4 - 94230402 19704274 19704273 19704358 74526045 74526044 74526129 85 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTT---TTCAATCTAC-AATATTTTC ..x..x....................x:....:.:.x:..:...:.:.:.:.:..x..::x.:::.---::...::...-.......:. 66M3D10M1D9M 59/85 69.4% 85/94230402 0.0% 4/85 4.7% 122415592 67798963 +4017 chr4 + 190214555 142128162 142128161 142128263 102 CTGATAAAGATGAAGGTAGTATTCATTCATATATAAATATATATATGTG---------TGTGTGTGTGTGTATGTATATACACATAT--ATATACGTGTGTGCACACACACAT chr4 - 94230402 70982570 70982569 70982681 23247722 23247721 23247833 112 CTACTACAATTGGAGGTAG-GCTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..:x..x.:x..:......-::.xx..........x..x...x:....:---------:x...............:.:....:..:.--...x.:.........:........ 19M1D29M9I29M2I24M 77/101 76.2% 112/94230402 0.0% 12/101 11.9% 71145592 NA +3346 chr4 + 190214555 142128181 142128180 142128277 97 TATTCATTCATATATAAATATATATATGTGTGTGTGTGTGTGTATGTATATACACATATATATACGTGTGTGCACACACACATACACACAATCTTAG chr4 - 94230402 70982604 70982603 70982697 23247706 23247705 23247799 94 TATTTATTCATGTA---ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTGG ....:......:..---.:x.x.x.x:x...........:...:....:...:::x:...x..::.....:::.......::xx..x::x.....:. 14M3D80M 62/94 66.0% 94/94230402 0.0% 3/94 3.2% 71145577 NA +3097 chr4 + 190214555 142135759 142135758 142135798 40 CTGTCAGGGTGTTTTTTGTTTGTTTGTTTGTTTATTTTTT chr4 - 94230402 76193481 76193480 76193520 18036883 18036882 18036922 40 CTGTAAGGGTGTTTTTTGTTTGTTTGTTTGTTTTATTTTT ....x............................xx..... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 65942278 NA +3705 chr4 + 190214555 142171845 142171844 142171911 67 CCAAAATCACTGCAGCAAGTTGTAAATGATGTATGAAATGACAAATCCCTGCCCAGTGCACAAGAAG chr4 - 94230402 76990502 76990501 76990568 17239835 17239834 17239901 67 CTGGAAGCACTGCAGCAGGCTTTGAATGATGGATGAAATGAAAAATCTCTGCTCAGTACTCACAGAG .:::..x..........:.:.x.:.......x.........x.....:....:....:.x..x::.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 65181343 NA +5695 chr4 + 190214555 142171849 142171848 142172017 169 AATCACTGCAGCAAGTTGTAAATGATGTATGAAATGACAAATCCCTGCCCAGTGCACAAGAAGAATATAAATACTGCTCTGTAATCACTGCAGTGGTGTGCTATTCGCTAAAATTTTCAGCTTAGGTGAACCCAGAAAAACCTCACCTCATCTA-----TAAATCCAAAAAAGA chr4 - 94230402 13943606 13943605 13943750 80286653 80286652 80286797 145 AATCACTGCAGAAAGTTATAAATGATGTATGAAATGAGAAATCCCTGCTCAGAGCACAGA---------------GCT---TAATC----------TATGCTATTTGCTGCAAAAGTCAGCTCAGCTGCAAGCAGAAAAACC-CACCCCATACAGGAGCTACATCCTAAGAAAA ...........x.....:...................x..........:...x.....::---------------...---.....----------.:.......:...:x..xxx......:..x..x.xx..........-....:...x:.-----..x....x..:..:. 60M15D3M3D5M10D46M1D11M5I15M 114/140 81.4% 145/94230402 0.0% 34/140 24.3% 128228243 61986312 +3412 chr4 + 190214555 142185353 142185352 142185445 93 ACCTGCTAGATAT---ATATTTATAAATATATATGTGTATGTGTGTGTGTATATATAT---------------ATATATATATATCTCATCAGCCATACTTCT-------ACTTCACA chr4 - 94230402 80748272 80748271 80748389 13482014 13482013 13482131 118 ACTCACTAGCCATCCAATTTTTTTAAATATATATGTGTATGGGTGTGCATATATATATTTTTAAGCTTTTAAAATATATATACATGCAAGGAGCTATATACCTGTGTGTAACTTCACA ..:::....x:..---..x...x..................x.....::.........---------------.........:..x:x.xx...:...:x:..-------........ 13M3I42M15I30M7I8M 73/93 78.5% 118/94230402 0.0% 25/93 26.9% 61437081 NA +3058 chr4 + 190214555 142185367 142185366 142185426 60 TATTTATAAATATATATGTGTATGTGTGTGTGTATATATATATATATATATATCTCATCA chr4 - 94230402 68967416 68967415 68967475 25262928 25262927 25262987 60 TATTTCTGACTATATATGTGTAAGTATATGTGTAAATATACATATATTTACTTTTTTCCA .....x.:.x............x..:.:......x.....:......x..:x.:.:x:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 73217951 NA +3182 chr4 + 190214555 142185369 142185368 142185434 66 TTTATAAATATATATGTGTATGTGTGTGTGTATATATATATATATATATATCTCATCAGCCATACT chr4 - 94230402 11922427 11922426 11922492 82307911 82307910 82307976 66 TTAATAGACATATATGTGTTTATGTTTGTGTATATATATAGAAATATTTGCCCTACAGGCAATATT ..x...:.:..........x.:...x..............x.x....x.::.::.:x:..x...:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 130262942 59951613 +3052 chr4 + 190214555 142186305 142186304 142186358 54 TATTATTTCCACTTTACAGATGAGGAAACTAAGGTACAGAAAGGTGTGGTAATC chr4 - 94230402 42848049 42848048 42848102 51382301 51382300 51382354 54 TGTTGTCTGCATTTTACCAATGGGGAAACTAAGGTACAGAAAAGTCTGATGGCC .:..:.:.x..:.....x:...:...................:..x..:.:::. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 99338256 90876299 +3052 chr4 + 190214555 142187564 142187563 142187615 52 TATATATACACACATACACACACACACAGACACACATTTTTTTTTTGAGACA chr4 - 94230402 78588445 78588444 78588496 15641907 15641906 15641958 52 TGTGGACACAGACATAGACACACACACATACACGCATTTTTCTATTGAAACA .:.:x.:...x.....x...........x....:.......:.x....:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 63599119 NA +3099 chr4 + 190214555 142188468 142188467 142188553 86 CAGAGTGAGACTCCATCTC-------------AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAATATATATAGCTTGACTTATGAGTTCATACAAAAT chr4 - 94230402 89377139 89377138 89377237 4853166 4853165 4853264 99 CATAGGAGGACTCCATCCATTTTCTTTTTGGAAAAAAAGAAAAAAAGAAAAAAAAGTAACAACAACAAACATGTATTGTATTAGCAGTTCATGCAAAGT ..x..x::.........:x-------------......:.......:........:x..x..x..:.x.:..:xx...xx...xx.......:....:. 19M13I67M 62/86 72.1% 99/94230402 0.0% 13/86 15.1% 52811329 NA +3436 chr4 + 190214555 142190166 142190165 142190246 81 TTGGCTATCTGGGTTTTTTATTTGTTTGTTTGTTTATTTTTGTTTTTTTTTTTTTGGTGGGGGGCAATATCAAA-TGAAAGA chr4 - 94230402 29288736 29288735 29288814 64941589 64941588 64941667 79 TTGGCTTGCT---TTTTTTGTTTGTTTGTTTGTGTATTTATGTTCTATTTTCTTCATTTAGGCACAACTTCAAATTGAAAGA ......xx..---......:.............x.....x....:.x....:..::x.x:..x:...:x.....-....... 10M3D61M1I7M 61/78 78.2% 79/94230402 0.0% 4/78 5.1% 112901430 77313125 +3019 chr4 + 190214555 142209790 142209789 142209832 43 CTCAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAGATAATAAAT chr4 - 94230402 11065090 11065089 11065132 83165271 83165270 83165313 43 CTCAAAGGAAAAAAAGAAAAAGAAAAAAGGCCAGATGACAAAT ......::.......:.....:.......x......:.:.... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 131144700 59069855 +3073 chr4 + 190214555 142215899 142215898 142215948 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATCTGACAC chr4 - 94230402 43663428 43663427 43663477 50566926 50566925 50566975 50 AAAAAAAAAAAAAAAAAAAGAGCATAAATACAAAAGCAGAAATCTGGCAC ...................:.:x.x...x.x.....x..:......:... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 98552471 91662084 +3167 chr4 + 190214555 142222048 142222047 142222116 69 CTCCTGGGCTCAAGCCATTCTCCTGGCTCAGCCTCCCAAGTAGCCAGGATTACAGGTGGGTGCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.....:.....:xx...x.xx..........::........::.:.:....x...-----...... 58M5D6M 49/64 76.6% 64/94230402 0.0% 5/64 7.8% 124024909 66189646 +3199 chr4 + 190214555 142235110 142235109 142235184 75 ACTTTGAAGATAGCACTGTGAAGGACTCAAAAGTAGCAGACAAGCAGTAGAAAGACAGCGGCTCATCCTTTAAGA chr4 - 94230402 61378577 61378576 61378651 32851752 32851751 32851826 75 ACTTGGATGATGGAAATGTGAAGGAGACAAAGAAAACTGACAAGAAGTAGAGAGAGAAGGGCTGGTGCTTGAAGA ....x..x...:.x.x.........xx....::x.:.x......x......:...x.:x....x:.x...x.... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 80856533 NA +3073 chr4 + 190214555 142245747 142245746 142245825 79 TCTGTTCATATATATGTATATGTGTGTATATATATATGTGTGTATGTATACATATATATGTGTATGTATACATATATGT chr4 - 94230402 68323940 68323939 68324018 25906385 25906384 25906463 79 TCCCTGCGTAGTTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGT ..:x.x.:..xx........x.::...:.x........x:.:x.x..:.:..::.x..::......:.x...x...... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 73921807 NA +3135 chr4 + 190214555 142245928 142245927 142246008 81 ATACATATATGTGTATGTATACATATATATGTGTATGTATACACACATGTGTGTATGTATACATATATATGTGTATGTATA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ...:x.x.:...x.:...x..x.x......:::..x.x:....:::.x......:......x..:.x:..:..x.....:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 60844635 NA +3230 chr4 + 190214555 142246052 142246051 142246134 83 TATATATATGTGTGTGTGTATACACACATTATATATATGTGTGTGTGTATACACACATATATATATGTGTATGTATACACACA chr4 - 94230402 70982598 70982597 70982680 23247723 23247722 23247805 83 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA .........x.:.x::....xx:x:x:x::x.:.:.:.....:.....:....:.::.x:...x......:..:......... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 71263454 NA +3059 chr4 + 190214555 142248303 142248302 142248349 47 TCTCTGTCTCTGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 47552681 47552680 47552727 46677676 46677675 46677722 47 TTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT .:...x:.x.x.....x..............:.:............. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 94695622 NA +3176 chr4 + 190214555 142248304 142248303 142248357 54 CTCTGTCTCTGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 28071375 28071374 28071428 66158975 66158974 66159028 54 CTCTATTTCTGCCTCATTTCCTCTCTCTCTCTCTTTTCTTTTTTTCCTTTGGAG ....:.:....:x.:x:.::.................:.......::...x... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 114176929 76037626 +3018 chr4 + 190214555 142248312 142248311 142248352 41 CTGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 50117647 50117646 50117687 44112716 44112715 44112756 41 CTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ......x.:x:.............:................ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 92130665 NA +3363 chr4 + 190214555 142248312 142248311 142248352 41 CTGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929907 18929906 18929947 75300456 75300455 75300496 41 CTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...x:...................:................ 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 123318405 66896150 +3202 chr4 + 190214555 142248313 142248312 142248353 41 TGTGTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 49339970 49339969 49340010 44890393 44890392 44890433 41 TGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTT ...:......::.........................::.. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 92908343 NA +3326 chr4 + 190214555 142248319 142248318 142248355 37 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG chr4 - 94230402 18929912 18929911 18929948 75300455 75300454 75300491 37 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG .:................................... 37M 36/37 97.3% 37/94230402 0.0% 0/37 0.0% 123318407 66896148 +3012 chr4 + 190214555 142288584 142288583 142288640 57 GGAAGAAAAAAAAAGAAAAGGCTGATTACTGAATCTGGCCTATCTTCCCTAAAATAA chr4 - 94230402 77148432 77148431 77148488 17081915 17081914 17081971 57 GGAAAAAAAAAAAAAAAAAAGCTGAGTGCTAAATCTGGGCCAATTCCATTATAATGA ....:.........:....:.....x.:..:.......x.:.x:.:.x:..x...:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 65140152 NA +3594 chr4 + 190214555 142330491 142330490 142330565 75 CCTGTCAGAACCAGGGA------TGCATACACACACGCATATGTGCACACACGCACACACATACACGCGCACGCACACACA chr4 - 94230402 90815392 90815391 90815472 3414931 3414930 3415011 81 CCAGCCAGAGCCAGGCGAGCTCTTGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA ..x.:....:.....x:------..:..::.........xx..........::..x......:...:.::.x......x.. 17M6I58M 56/75 74.7% 81/94230402 0.0% 6/75 8.0% 51515099 NA +3001 chr4 + 190214555 142369577 142369576 142369628 52 GAAAATTAAAAAAATAAATAAATAAATAAATAAATAAATAAAAATAAAAAAA chr4 - 94230402 53293867 53293866 53293918 40936485 40936484 40936536 52 GGAAGCAAAAAAAAAAAAAAAGTGAATGAATAAATAAATAAAAATGGAGAAA .:..::x.......x...x..:.:...:.................::.:... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 89075710 NA +3010 chr4 + 190214555 142373533 142373532 142373593 61 GTGACTTTGGGAAAGCTGCTTCACCTCTCTGTGCCTCAATTTCCTCATCTAGAAAATGGGA chr4 - 94230402 42976387 42976386 42976447 51253956 51253955 51254016 61 GTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGA ....:::..x.x...:::..........:x:x....:x:......:x...:.......... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 99397146 90817409 +3302 chr4 + 190214555 142391567 142391566 142391621 55 AAACAAAAAACAAAACAAACAAAACAAACAAAAACAAACAAACAAAAAAAACCAT chr4 - 94230402 87979332 87979331 87979386 6251017 6251016 6251071 55 AAATTGGAAAAAAAACCAACAAAACCAACAAAAACAAACAAACAAAAACAGTTAT ...:x::...x.....x........x......................x.:::.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 54412235 NA +3092 chr4 + 190214555 142398366 142398365 142398464 99 AGACTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATAA---------AACATATTAAACATAGT chr4 - 94230402 28944737 28944736 28944844 65285559 65285558 65285666 108 AAACTAGTTTCAAGATGAGTAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGACATATTTCACCTAAT .:...xxx.::..:.x:.:x.:......x..x..x.x.x....x.:.:.:.x.........x....:.......:..x....---------:.......xx..x..:. 82M9I17M 68/99 68.7% 108/94230402 0.0% 9/99 9.1% 113453629 76760926 +3017 chr4 + 190214555 142398385 142398384 142398423 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 72960646 NA +3308 chr4 + 190214555 142404918 142404917 142404986 69 AGAAAAATAAACTCTTTGTATGAAAAGAAAAAAAAAGACAAGTTA---TTTTGTCATTTGTTCGTTCTAGTA chr4 - 94230402 85806366 85806365 85806437 8423966 8423965 8424037 72 AGAGAAAAAAACTCTTTGTAGGAGGAAAAAAAAAAAAAAGTGTTATCTTTTTATCCTTTTTTCCTTTCAGTA ...:...x............x..::.:.........:.x:x....---....:..x...x...x..::.... 45M3I24M 53/69 76.8% 72/94230402 0.0% 3/69 4.3% 56598552 NA +3803 chr4 + 190214555 142434793 142434792 142434862 70 CAAGGGTGTCCAATCTTTTGGCTTCTCTGGGCCACATTGGAAGAAAAAGAATTGTCTTGGGCCACACCTA chr4 - 94230402 50314697 50314696 50314766 43915637 43915636 43915706 70 CATGGGCATCCAAACTTTTGTCTTATCTGGGACACATTTAGTGAAAAGAAATTATCTTGGACCACATATA ..x...::.....x......x...x......x......x::x.....::....:......:.....:x.. 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% 92120096 NA +3153 chr4 + 190214555 142442412 142442411 142442493 82 AAAAAAAAAAAAAAAAAAAGAGAGAGAAGAAAAAAATAAAAAGATGAATAAATCTGACTACTTTAAAATTAAATGTTCTGTG chr4 - 94230402 49250050 49250049 49250125 44980278 44980277 44980353 76 AAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAACTACATTCCT------TTATATGTTCTTTG ........:.............:x:......:....x::..:.x::...:..::xx.:.x..------...x.......x.. 62M6D14M 55/76 72.4% 76/94230402 0.0% 6/76 7.9% 93192362 NA +3290 chr4 + 190214555 142475268 142475267 142475312 45 TATAAAAGCAAATAAACAAAAAACCCCCAAAAAACAAAACAAAAA chr4 - 94230402 3313016 3313015 3313060 90917343 90917342 90917387 45 TATTAAAACAAACAAACAAAAAACCCCCAAAAATAAAAACAAAAA ...x...:....:....................xx.......... 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 139162252 51052303 +3457 chr4 + 190214555 142475278 142475277 142475333 56 AATAAACAAAAAACCCCCAAAAAACAAAACAAAAACAAAACAAAAC--AAACAAAAAA chr4 - 94230402 82078712 82078711 82078769 12151634 12151633 12151691 58 AACAGAACAAAAACCCCCAAAAAACAAACAAAAAACAAAACCAAACCAAAACAAAAAA ..:.:.xx....................xx...........x....--.......... 46M2I10M 49/56 87.5% 58/94230402 0.0% 2/56 3.6% 60396566 NA +3265 chr4 + 190214555 142498087 142498086 142498147 61 AATGTATTTTGTGTGTGTGTGTGTATATATATATACACACACACATATATGTATACATACA chr4 - 94230402 49414743 49414742 49414803 44815600 44815599 44815660 61 AATTTATATTGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA ...x...x........:.....:x.:.x.....:.....:x..:..:....:.:...:.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 93083344 NA +3028 chr4 + 190214555 142498093 142498092 142498141 49 TTTTGTGTGTGTGTGTGTATATATATATACACACA-CACATATATGTATA chr4 - 94230402 19559293 19559292 19559342 74671061 74671060 74671110 50 TTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATA .............................:.:...-.xx..x.x...... 35M1I14M 43/49 87.8% 50/94230402 0.0% 1/49 2.0% 122938800 67275755 +3240 chr4 + 190214555 142498098 142498097 142498149 52 TGTGTGTGTGTGTATATATATATACACACACACATATATGTATACATACATA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .......:......x.:.x...........:x.....:.:.::...:..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 93083346 NA +3161 chr4 + 190214555 142498123 142498122 142498213 91 ACACACACATATATGTATACATACATATGTGTATACATATATATGTATGTATACATACATATGTATGTG--TGTGCGTGTGTGTATAT-ATATA chr4 - 94230402 64944124 64944123 64944217 29286186 29286185 29286279 94 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATGATATA ...:.x.:.::...:x...x.....x..:......:..x.:.:x.xx.....x:x.x:..x.....:..--.x.......:.......-..... 69M2I17M1I5M 65/91 71.4% 94/94230402 0.0% 3/91 3.3% 77553999 NA +3167 chr4 + 190214555 142498157 142498156 142498221 65 ACATATATATGTATGTATACATACATATGTATGTGTGTGCGTGTGTGTATATATATATATACACA chr4 - 94230402 48089492 48089491 48089553 46140850 46140849 46140911 62 ACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT---TACACA ..x.x.:..x..x......:.:..:.:...:.:....x.x................---...... 56M3D6M 49/62 79.0% 62/94230402 0.0% 3/62 4.8% 94408665 NA +3164 chr4 + 190214555 142498161 142498160 142498237 77 ATATATGTATGTATACATACATATGTATGTGTGTGCGTGTGTGTATATATATATATACACATATACTTACATATAAA chr4 - 94230402 8395788 8395787 8395864 85834539 85834538 85834615 77 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ..:.:.......:.:....x.:......x.:::.::..:..:x..:..xx...:.:.....:.:..x:.x.:.:... 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 134102373 56112182 +3616 chr4 + 190214555 142530534 142530533 142530605 72 CATATATATGTGTGTGCATATATATATATATATATATATAT------------ATATACACACACACACAGACGCACATACATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:.:.:..........x.:..:...x..:....:...------------.:.:................:..x..:x... 41M12I31M 56/72 77.8% 84/94230402 0.0% 12/72 16.7% 134134747 56079808 +3241 chr4 + 190214555 142537399 142537398 142537452 54 AGTATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398820 33398819 33398873 60831530 60831529 60831583 54 AGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ...:.:::.:.:.:....:.:.......:.:.............x.....x... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 109138579 81075976 +3033 chr4 + 190214555 142545713 142545712 142545775 63 GTGTATATGTGTGTATATACACATATATGTGTATATATATACACATGTATATGTGTGTATATA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ....:::.......:..:.......:....::...x.:xx.:x.....:....::.:..:.:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 95450549 NA +3708 chr4 + 190214555 142548732 142548731 142548837 106 AGTGCATACAGATGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATATATATATTAATTT--AACGTTTTGACAGAAAATCATTCTAAAATGTATTAAATT chr4 - 94230402 57691396 57691395 57691496 36538907 36538906 36539007 101 AGTGCATACA----TGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAA---GTTTGGAAATGCATCAAGTT ..........----..::.......:..:x.........:::.x.....x...x.....x.......--.x:x....:.:.x:..---:..:x:.....:..:..:.. 10M4D53M2I16M3D20M 73/99 73.7% 101/94230402 0.0% 9/99 9.1% 84857336 NA +3778 chr4 + 190214555 142552735 142552734 142552837 103 TGTCTTAATATTACAGCAGCTCCAC-AGGTAGG-AATAATTGTCATCCCAATTTTAGAGATGAGAAAACTAAAACTCAGAGAGGGCAAGTTATTTGCCCAAAGTC chr4 - 94230402 10729158 10729157 10729262 83501141 83501140 83501245 105 TGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..x:...::x.:...::.x.:.:::-.......-...x.:.:...x.:.x......x..:..:.......:.::.x..x.x...x:....x.........:.... 25M1I7M1I71M 71/103 68.9% 105/94230402 0.0% 2/103 1.9% 131823577 58390978 +3018 chr4 + 190214555 142568124 142568123 142568164 41 TCTTTCCCCTTTTCCTTTCTTTTTTTATTCTTTTTTTTTTT chr4 - 94230402 72884654 72884653 72884694 21345709 21345708 21345749 41 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCT ....x:....:...............x............:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 69683470 NA +3151 chr4 + 190214555 142677990 142677989 142678033 44 AAAAAAAAGCTTTTAAAAGAAGAAAAGTAACTTTAAAAAAAGGT chr4 - 94230402 50583106 50583105 50583149 43647254 43647253 43647297 44 AGAAAAAAGCTTTTTAAAAAAGAAAAGAAACTTTAGAAAAGGGT .:............x...:........x.......:....:... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 92094884 NA +3039 chr4 + 190214555 142693459 142693458 142693529 71 TGGCTATCTTAAAATGCCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 32752667 32752666 32752737 61477666 61477665 61477736 71 TGTCTATTTTGAAGTGTTTTTATATGGTACAAAACCAGCAAAGCAAGGAAAGAAAAAAAAAAAAAAAAAGA ..x....:..:..:..::...x.x.::x.x....xx.:x...:x..::...:.................:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 109940792 80273763 +3067 chr4 + 190214555 142693462 142693461 142693513 52 CTATCTTAAAATGCCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 54585536 54585535 54585587 39644816 39644815 39644867 52 CTTTTTTAAATAGCATTTTCCTGAAAAGAAAAAAAGAAGAAGAAAAAAAAAA ..x.:.....xx..x....:..:....:.......:..:..:.......... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 88107926 NA +3179 chr4 + 190214555 142693474 142693473 142693565 92 GCCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTGACATCTTTAAGGAACTCTCCATTTGT chr4 - 94230402 37425221 37425220 37425312 56805091 56805090 56805182 92 GTTTTGTTCTGAAAAAAAAAAGAAAAGAAAAAGAAATAGACAGTGGAGTAGAAAATTAAGGAGTAGATATTTTTAAAATATTCAGTATTTGT .::..x....:..........:....:.....:...x.:.x.:x::.:x.:....xx..:::x:x..:..:.....::x.:..xx:...... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 105268253 84946302 +3179 chr4 + 190214555 142693492 142693491 142693589 98 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTGACATCTTTAAGGAACTCTCCATTTGTAAGGGTGTCTGCTTGCATACATTA chr4 - 94230402 50464073 50464072 50464170 43766233 43766232 43766330 98 AAAAAAAAAAAAAGACAGAAAAGATGTAAAGGACAAGGTTAAACTTCTACAGCATTAGGCAAATCTGCATTTGTGGGATTCTGTGTTTACATGTACTA .............:.x.:....:.x:x...::.x..::xx...x:::x...x.x...:.x..x...x.......::.:x.x.x..:..:...::.:.. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 92229419 NA +3230 chr4 + 190214555 142720729 142720728 142720795 67 TACATATATATATATATATACATATATATATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC chr4 - 94230402 92735348 92735347 92735414 1494989 1494988 1495055 67 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTC .:.....x.....:...:....:.........x.:.:...x.:.:.:.:...x.:..:..xxx.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 49985381 NA +3436 chr4 + 190214555 142759824 142759823 142759912 89 CTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAATTGCCCTGTGAAGCAATTCTGGTACATACTTAGATAATAAGAAACAAAAAAAGA chr4 - 94230402 66689576 66689575 66689660 27540743 27540742 27540827 85 CTAAGAACAAAAAAAAAAAAAAAAAAGAAACTTAATTTCTGTGTGAAGAATAATTGTGAGATTTTTAAAT----GGGAACAAAGGCAGA ....:..x..................:...:......x.:x.......x.xxx:..xx.x..x:...:..----:.:......::x... 70M4D15M 62/85 72.9% 85/94230402 0.0% 4/85 4.7% 76070248 NA +3124 chr4 + 190214555 142784339 142784338 142784428 90 GGTGATAGAGAGAAA-CTCTGTCTC----AAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAATTAAAATCAAGGACT chr4 - 94230402 71314644 71314643 71314738 22915665 22915664 22915759 95 GATGGTGGAGGAAAGTCTTCTTCTCTTAAAAAGACAAAGCTATTAATACAGAAATAAGTAGATAAATAAATAAAAGACAGTGACAATCAAGCACT .:..:.:...::..:-..::x....----...:.:...xxx..x....x.x......:..:.............x:.x.:.x.x.......x... 15M1I9M4I66M 64/90 71.1% 95/94230402 0.0% 5/90 5.6% 71469695 NA +3214 chr4 + 190214555 142806274 142806273 142806327 54 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAAAAAGAACATATAAATG chr4 - 94230402 6438506 6438505 6438559 87791844 87791843 87791897 54 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATG ....:.....:.....::............:......::.:.:.x..:x.:... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 136367768 53846787 +3315 chr4 + 190214555 142806738 142806737 142806865 128 TGTTAAAAAAAAAGAAGAAGAAGAAA---GAA--GAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAAAAAGAA chr4 - 94230402 61334667 61334666 61334799 32895604 32895603 32895736 133 TGTTAGCACAAATGTATAAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA .....:x.x...x.x.x...:.:.x.---...--......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:...x::.......:..:. 26M3I3M2I99M 82/128 64.1% 133/94230402 0.0% 5/128 3.9% 81472071 NA +3532 chr4 + 190214555 142806759 142806758 142806899 141 AGAAAGAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGG-----AGAAGAAAAAGAAACAAGCTAAAGAGTGAGGGAGAGAAAAATTCAAA chr4 - 94230402 29503818 29503817 29503957 64726446 64726445 64726585 140 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAG-------AAAATCCAGA .:.....:.:...:..:.:.........x:.::..:....:...:.xxxx.x:....:....:.:.x:...-.x...x:.x:.x.::x.......-----.:..xx.x:..:..:.::x......:.x..-------.....:..:. 71M1I23M5I30M7D10M 87/134 64.9% 140/94230402 0.0% 13/134 9.7% 113302941 76911614 +3044 chr4 + 190214555 142806774 142806773 142806857 84 AGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::....:.:... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 105948480 84266075 +3029 chr4 + 190214555 142808102 142808101 142808159 58 ATACACACACACACACACACACACGAAAAGAAACAAAGAAAAACAAGCCATCCATCCA chr4 - 94230402 6251395 6251394 6251452 87978951 87978950 87979008 58 ATAGACACACACACACACAAGGAAAAAAAGAAAGAAAAAAACACCAACCAACCAACCA ...x...............x:x.x:........x...:...x..x.:...x...x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 136556707 53657848 +3317 chr4 + 190214555 142889458 142889457 142889588 131 TATGAATAATGCTGCTGTGAAC--------ATGCATGTGTAAATTTTGGTTGG------GCATATGTTTTCAATTTATGTGTATATATATATATATATATACACACACATATATATATATACA--CACACATATATATACACACACA chr4 - 94230402 14964737 14964736 14964883 79265520 79265519 79265666 147 TATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...:....xx:x.....x.x..--------......x....x.:.:x::xx..------....x.:.x.xx.:x.xx....x.:.:.x....:.x.:::.:::.....:.:...:........--......:..::.:......... 22M8I23M6I64M2I22M 87/131 66.4% 147/94230402 0.0% 16/131 12.2% 127924721 62289834 +3172 chr4 + 190214555 142889509 142889508 142889554 46 GTTTTCAATTTATGTGTATATATATATATATATATACACACACATA chr4 - 94230402 10898945 10898944 10898990 83331413 83331412 83331458 46 GCTTCTATTTTATGTGTGTATATATATATACACATATACACACATA .:..::.x.........:............:.:...:......... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 131990564 58223991 +3014 chr4 + 190214555 142889517 142889516 142889565 49 TTTATGTGTATATATATATATATATATACACACACATATATATATATAC chr4 - 94230402 64433216 64433215 64433264 29797139 29797138 29797187 49 TCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.x.....:.........x..:.:........:....::...:...:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 78456301 NA +3009 chr4 + 190214555 142889532 142889531 142889572 41 ATATATATATATACACACACATATATATATATACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x..............:......:....:.x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 97617844 92596711 +3009 chr4 + 190214555 142889534 142889533 142889574 41 ATATATATATACACACACATATATATATATACACACACATA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x......:..............:......x.....:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 97617846 92596709 +3164 chr4 + 190214555 142889534 142889533 142889597 64 ATATATATATACACACACATATATATATATACACACACATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x...:.:...:..:::x.::.x.:....x.....::........... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 125368785 64845770 +3233 chr4 + 190214555 142889556 142889555 142889621 66 ATATATATACACACACATATATATACACACACATATATATACACACATATATACACACATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::.....:.:...:............x..x::x..x:.:......xx....:::.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 75984709 NA +3348 chr4 + 190214555 142889556 142889555 142889616 61 ATATATATACACACACATATATATACACACACATATATATACACACATATATACACACATA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ...:.x..:..:...x..:...........:...:....:.x...:...:x...:...::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 135293143 54921412 +3634 chr4 + 190214555 142889570 142889569 142889645 76 ACATATATATACACACACATATATATACACACATATATACACACATATATATACTATATATATACATACATAGTAT chr4 - 94230402 28470367 28470366 28470442 65759961 65759960 65760036 76 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAAGTAGATATGAAAGACCAAAGTAT ......:........x....:...::.........:....x....x..x..x.x..x....:x.x:xx..x..... 76M 57/76 75.0% 76/94230402 0.0% 0/76 0.0% 114419203 75795352 +3286 chr4 + 190214555 142901673 142901672 142901826 154 ATAAAAAAAATTTTTTCTCATTTATTCAGTTCTAATTCTTTCTTTCAAAAATGTTTTAGAGGTTTTTTTTTTTTTTTGCACATAAATTTTACATATTTTTCTCAGGTTTATTCTTTTTTTTTTT----------TTTTTCGAGACAGAGTCTTGTTCTGTTGCC chr4 - 94230402 8809011 8809010 8809174 85421229 85421228 85421392 164 ACAGGAAGAGATTTTTAGTGCTGATTAAGAATGTTTTCATTTTTTCACAAATGTTTTATACACTTTTTTTTTTTTTTTTGTCTGACTTGAATGTATTATGTGCATACTTTTTTTACTTCCTTTTATGTTACCTCTCTTTGAAGATAGGGTCGATTTCAGGTACC .:.::..:.:x.....xx:::.x...x..xx:xxx...x..:.....x..........x.x::..............x:::x.:.x..xx.::....x.x:x..x::..x..:.x:..::....----------.:...x:...:..:...xxx...x.x.:.. 124M10I30M 93/154 60.4% 164/94230402 0.0% 10/154 6.5% 134092662 56121893 +3198 chr4 + 190214555 142901871 142901870 142901933 63 GCCTCTGGAGTTCAAGTGATCCTCCCACCTTAGCCTCCCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGG-GTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....-.........x.:.x.xx:x..:.....::.........:.:......x...... 8M1D54M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 124704733 65509822 +3551 chr4 + 190214555 142914270 142914269 142914460 191 AGGCAGAGTCATAACAGGAAGAAACCAAAGACCTTGGTGTATTAGTCAGGGTTTTCCAGAGAAGCCAAACCAATAACATATATATATATACATACATATATATATACACACACACACATATATACACACACACACATATGTATGTACATTATTAA----TTCAAAGAG----AATTCTTTTACTTTCTTGGAAATCACT chr4 - 94230402 7596345 7596344 7596530 86633873 86633872 86634058 186 AGGAAATATCATAACAGAGGAACAGCAGAAAGTTT----------TCAGATTTTTCTCTAAGACC---ATCTTCATCTTCCATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTTCCTGGAGTGCTAGCTCATTTAAATTCCTAGTGATTACT ...x.:x:.........::::.x.x..:.:.x:..----------....:x.....:xx.::.x.---.:.xx:.x.x.x:...:.x..:......x..:...........:..:::...:.x...:.:..x:..::.:.:.:.:x....x..x:----...xx:...----.::..x....xx...:.:.x:..:... 35M10D20M3D87M4I9M4I27M 110/178 61.8% 186/94230402 0.0% 21/178 11.8% 135317925 54896630 +3181 chr4 + 190214555 142914336 142914335 142914387 52 AAACCAATAAC----ATATATATATATACATACATATATATATACACACACACACA chr4 - 94230402 45271673 45271672 45271728 48958675 48958674 48958730 56 AAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ...:..x....----....x..........:..........:..:...x....... 11M4I41M 45/52 86.5% 56/94230402 0.0% 4/52 7.7% 97642663 92571892 +3194 chr4 + 190214555 142914344 142914343 142914404 61 AACATATATATATATACATACATATATATATACACACACACACATATATACACACACACAC chr4 - 94230402 14964824 14964823 14964884 79265519 79265518 79265579 61 AATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:..:.x.:::.:.:..:..:.:...:....:...xx......:..::............ 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 127949520 62265035 +3094 chr4 + 190214555 142914369 142914368 142914415 47 ATATATACACACACACACATATATACACACACACACATATGTATGTA chr4 - 94230402 38535895 38535894 38535941 55694462 55694461 55694508 47 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTA ............::...::x:x.......:........:........ 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 104378474 85836081 +3136 chr4 + 190214555 142977111 142977110 142977170 60 GAGCAACAGAGTGAAACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTTAA chr4 - 94230402 42857977 42857976 42858036 51372367 51372366 51372426 60 GAACAGCAGAATGAAAACACAAACAGAAGAAACAGGAAAAAAAAAAAAAAAAGGATTTGA ..:..:....:.....x::....x.:..:...x.::................:xx...:. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 100119134 90095421 +3316 chr4 + 190214555 142985202 142985201 142985266 65 CTGCCTGAGGGATGGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTC chr4 - 94230402 66916751 66916750 66916806 27313597 27313596 27313652 56 CTGTCCAAAGCATGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTT---------TTTGTTTTTC ...:.::.:.x.........x.................x.:.....---------.......... 46M9D10M 48/56 85.7% 56/94230402 0.0% 9/56 16.1% 76068451 NA +3138 chr4 + 190214555 142985209 142985208 142985270 62 AGGGATGGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTCTCAC chr4 - 94230402 47132213 47132212 47132274 47098129 47098128 47098190 62 AGAAATTGTCTTCCTTGTCTTCACAGTTGTTGTCTGTTTGTTTGTTTGTTTCTTCTTTTAAC ..::..x..:..:x....:x.:::x........:.................x..:..:.x.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 95852996 NA +3349 chr4 + 190214555 142985214 142985213 142985256 43 TGGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTG chr4 - 94230402 17488396 17488395 17488438 76741965 76741964 76742007 43 TGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTG ...:....x..............:..x................ 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 125496818 64717737 +3130 chr4 + 190214555 142985215 142985214 142985251 37 GGTTTTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTT chr4 - 94230402 79435099 79435098 79435135 14795268 14795267 14795304 37 GGTTTTTGTTGTTGTTGTTGTAGTTGTTTGTTTGCTT .....................x............:.. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 63550116 NA +3204 chr4 + 190214555 143001309 143001308 143001383 75 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAATATATATATATATATATATATATATATAATTATAACAC chr4 - 94230402 86407067 86407066 86407145 7823258 7823257 7823336 79 TCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTAAAATAC .....:x..............:..x...:..----..:.xx.x:.:.x......:.:.........:..xx..x..:.. 31M4I44M 56/75 74.7% 79/94230402 0.0% 4/75 5.3% 56594242 NA +3056 chr4 + 190214555 143001328 143001327 143001377 50 AAAAAAAAAAAAAAAAAATATATATATATATATATATATA-TATATAATTA chr4 - 94230402 69437739 69437738 69437789 24792614 24792613 24792664 51 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTA .........x........:x...................x-..:....x.. 40M1I10M 44/50 88.0% 51/94230402 0.0% 1/50 2.0% 73563589 NA +3514 chr4 + 190214555 143001333 143001332 143001380 48 AAAAAAAAAAAAATATATATATATATATATATATATATATAATTATAA chr4 - 94230402 71167190 71167189 71167237 23063166 23063165 23063213 48 AAAAAAAAAAAAATACACACACACACATATATATATATATAATTACAA ...............:.:.:.:.:.:...................:.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 71834143 NA +3044 chr4 + 190214555 143013783 143013782 143013855 73 ATTGAAGAGATTGTCTTTTCCCTAACATATATTTTCTATGCCTTAATCAAAAATTGGTTCGCTGTAGATACAT chr4 - 94230402 50258821 50258820 50258893 43971510 43971509 43971582 73 ATTAAAGGGATTGTCTATTCCCTAATGCATTCTTACAATGCCATTCCTCAAAATTGGTGTGAAGAAGATGCAT ...:...:........x........:::..x:..x.x.....x.xx::x.........x:.xx.x....:... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 92754962 NA +3151 chr4 + 190214555 143014994 143014993 143015057 64 TTCCTTTTTTCTTGTGTCCTTGTTGTTGTTGTTGTTGTTTT--------TTATTTTGGTTTTTTGCTTGTTT chr4 - 94230402 69000649 69000648 69000720 25229683 25229682 25229754 72 TTCCTTCTTTCGTGTATTTTATTTGTTGCTGTTGTTGTTTTGGTTTGGGTTATTTTTGTTGCTTGTTCATTT ......:....x...:.::.xx......:............--------.......x...x:...:.::... 41M8I23M 50/64 78.1% 72/94230402 0.0% 8/64 12.5% 74014345 NA +3484 chr4 + 190214555 143027746 143027745 143027828 83 CTGCAACTTCCGACTTCTTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCACATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:.::xx::.....x........:.x...x.xx.x........::............::....x.::..--....::.. 73M2D8M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 124830620 65383935 +3271 chr4 + 190214555 143055264 143055263 143055352 89 CAGATTCATTCACAAGTCTCTATTTTTGTAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAGAAAAGAAAAAAGAAAAAAAT chr4 - 94230402 83504194 83504193 83504280 10726123 10726122 10726209 87 CAAAGTGATTTAGATGTAGAAATTTTTGTAAAAAAAAAAAAAACGGGGGGAGGAGAAA--AAAAAGGGGGGGGGAAACAACAAAGAAAT ..:.x.x...:.x.x..xxxx......................x:::::..::.....--......::.::::....x..x...:.... 58M2D29M 60/87 69.0% 87/94230402 0.0% 2/87 2.3% 59551070 NA +3715 chr4 + 190214555 143055287 143055286 143055392 106 TTTTGTAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAGAAAAGAAAAAA-------GAAAAAAATGGGTTTTGT-CATTTTTTTCA------GTTATACCACTTTTTAAAAT chr4 - 94230402 35652679 35652678 35652798 58577605 58577604 58577724 120 TTTTGTAAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAAAAAAAAAGATTAGGTGCCCTTATTTCACACCTGGCTTTATGACTTTTCAAAAT ...........x...x...........:...:.....x.x:::.:x...x.....x.-------........x:.:..xx..-.x:..x.....------.:.x..:x......:..... 57M7I18M1I11M6I20M 80/106 75.5% 120/94230402 0.0% 14/106 13.2% 107402608 82811947 +3461 chr4 + 190214555 143058524 143058523 143058585 62 AAAAAAAAAAAAAAAAAAAGAGGAAAAAATTTGATTCAGTAAAAGCTAGAAGCCATGGAGGA chr4 - 94230402 21725678 21725677 21725739 72504664 72504663 72504725 62 AAAAAAGAAAAAAAAAATAGAGGAAAATATTTAATACAGTGAAAATAAAAAGACATCAAGAA ......:..........x.........x....:..x....:...::x.:...x...x:..:. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 121332846 68881709 +3087 chr4 + 190214555 143098842 143098841 143098914 73 GTGTATGTGTGTGTGTGTATATACATATATATATGTGTGTGTATATATATATTATATATATATCGGTTTCTTT chr4 - 94230402 71390447 71390446 71390519 22839884 22839883 22839956 73 GCATGTTTGTGCTTGTGAATAAGAACATACATGTATATGAATATATATATCTTATATATACCTTAGCTTTTTT .::.:.x....:x....x...x:x.:...:..:.:.:..x:.........x.........:x.::.:..:... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 71708395 NA +3070 chr4 + 190214555 143124646 143124645 143124702 57 ATTTCTTTTTTCTTTTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 17623040 17623039 17623096 76607307 76607306 76607363 57 ACTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAG .:...:...:..xx:::....:::.............:.x....x........:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 125501606 64712949 +3063 chr4 + 190214555 143134714 143134713 143134778 65 TTCTTTCTTTCTTTTTCTTTCTTTTTTTCTTTCTTTTCTTTTTCTTTCTCTCCATCTATTATTTT chr4 - 94230402 1569690 1569689 1569754 92660649 92660648 92660713 65 TTCTGGCTTTGCTCGCTTTTCTTTTTTGTTGGCTTTTCTTTTTCTTTCTCTCATTTTAATGTTTT ....xx....x:.:x::..........x:.xx....................xx.:..x.:.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 141565024 48649531 +3181 chr4 + 190214555 143137053 143137052 143137140 88 AATTTTC--TGTTAACCATTTAACCATGCTCCGGAAAGAAAAAAAAAAACAAAAAAACAATTTCATAAGGCAGCATTTTATCTGTCATTA chr4 - 94230402 21647543 21647542 21647632 72582771 72582770 72582860 90 AATTTTCCATTTTATCCTCTGGATCATTCTCAGGAAAAAAAAGAAAAAAGAAAAAAATATTTCCACAATCAAGTTGTCTATCTTCCCTTA .......--.x...x..x:.x:.:...x...x.....:....:......x.......:.x..:..:..xxx..:xx.:.....x:.x... 7M2I81M 62/88 70.5% 90/94230402 0.0% 2/88 2.3% 121489510 68725045 +4885 chr4 + 190214555 143178845 143178844 143179265 421 TCATCAGGGGTTTACTTATCATTTCTCTCCCATCAGAAAGTACCCATTTCCCATCTTCAGTTTGAGTGACCCCTATCC-------TGCCTAATTCTTCCTTCTTCTCTCTGGTAAACTGAGGCCTTAATACCACCTTAGGGATGTCTGGTATCAGGCTAAATAGTCTAATTTCTTCCTCCAGGGAGGCTTGCCTAGCAGCTTCATCCACAAACCTGTTTCCTACAGCTTCTATAGTGTTCCCGTTCTGATGATCATTTACATGAACTATGGCTACCTCTGCTGGAAGCAGGAGACTTTCTAAAACCTGTTTGACCAGTTCCCCGTGTACCAATTCTTTTCCCTTGCTATTTATTAGGCCCCGCTCTGTCCAGATTTTTCCAAAAGTGTGTACCACCCCATAGGCACATTTAGAATCAGTATATATATT chr4 - 94230402 45582789 45582788 45583202 48647201 48647200 48647614 414 TCATAAGAGATTGAGGGATAATTGTCTGTTTATCTGGAGTTATCTACCATCCTTTGTCATCTT---TAACCACTGTCCGTAATGTTGCC--AGTCTCTCATCTTTAGCTTGATAACGTGGGACTTCTTTCCCTAGTTATTTATATTTGTC--CAGGATTACTAATAAAAGAGTTCCTTCCGTGGCTGCTT---CAGCAGCTCTATTGGCAAGCTGCTGTAATTCA----CTGGAGTGTTACTGAACTGATGTGCCTTGCGATGCATCATGGCTACTTTCTGAGGAGGCTGTACACTTTCCAGTAACTCTATAATAATGGGTCCATATTTTATTTGTGATCCCTGGTAGGATAGCAGTCCTCTTTCCTTCCATGTTACTCCATGGCAATGTACAACTCCAAATGCAAATTTTGAATCATTCCATATATT ....x..:.:..x.xxx..x...x:::x:::...x.:.:x..:.:.::x:..x.:x...x:..---.:...x..:...-------....--.x...::.x....:xx::..:...xx..:.:.:.:xx.x..xxx...xxx..:.:..x:--....x.x.x..:.xx..xxx:.:.:...:x..xx....---:.......::..:x:...:.:xx.x.xx.x..----..:x......x.:.xx......xx.x..xxx...x.::........:.::xxx...:..x.x.x......:.:x.x..x.x.:.:x.xxxx:..:.:.x::.x..x.xx.....x.:x:xx..x:..x..:.x:..:x....x:..x:....x::xx:.....x..:...x.x...x....x......x.x:....... 63M3D12M7I4M2D59M2D38M3D32M4D199M 233/407 57.2% 414/94230402 0.0% 21/407 5.2% 97596056 92618499 +3356 chr4 + 190214555 143204465 143204464 143204538 74 CTGCAGCCTCTACATCTTGAGCTCAAGTGACCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTCCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx.xx.::..:.:.......x::.x.xx.x........::...........:...x..x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 125007339 65207216 +3518 chr4 + 190214555 143230117 143230116 143230186 70 TAGTTTT-TTTGTTTTTGGTTTTTTGGGTTTTTTGGTTTTTGGTTTTGTTTTTTTTTTTTTAGACAGAGTT chr4 - 94230402 37435170 37435169 37435240 56795163 56795162 56795233 71 TAGTTTTGTTTGTTTTTGGTTTTTTGGGTTTTTTTGTTACTGTTTGTTCGTTTTTTTCACTGGATAAATTT .......-..........................x...x:..x..x.x:x.......:x:.:..:.:.x.. 7M1I63M 55/70 78.6% 71/94230402 0.0% 1/70 1.4% 105794947 84419608 +3153 chr4 + 190214555 143255623 143255622 143255681 59 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAATATCTAGTATGAGGAATGATGAA chr4 - 94230402 12335851 12335850 12335909 81894494 81894493 81894552 59 TCAAAAACAAAAGAAAAAAGAAAAAAAAAACCACAAAATACAGTAGTGGGAAGCATGAA .......x....:......:...........:.x..x..x:....xx:....xx..... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 130919772 59294783 +3772 chr4 + 190214555 143280459 143280458 143280537 79 CTGCAGCCTCAAACTCCTGGGCTCAAGCAGCTCACCCACTTCAGCCTGCCAAGTAGCTGGAACTACAGGCATGAGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:x..:..:.....:.....::x:....xx:x:.......x:..................--.:..x:.... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 125083333 65131222 +3021 chr4 + 190214555 143298334 143298333 143298369 36 AAGGGGTTTTTTTGTTTGTTTGTTTTTGTTTTGTTT chr4 - 94230402 48899520 48899519 48899555 45330848 45330847 45330883 36 AGGGGGTTTTTTTGTTTGTTTGTTTTTGTTTTTTTT .:..............................x... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 94398814 NA +3073 chr4 + 190214555 143315770 143315769 143315823 54 CTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCAAAATAGCTGGAATTACA chr4 - 94230402 18197139 18197138 18197192 76033211 76033210 76033264 54 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.::........:.x...x..x.x........::x..:.........:.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 125118631 65095924 +3236 chr4 + 190214555 143334353 143334352 143334414 62 GCCTCCCGGGTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:x..x.....:.x...x.xx.x........::.:.........:......x.:.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 125137215 65077340 +3004 chr4 + 190214555 143335225 143335224 143335259 35 TTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929913 18929912 18929947 75300456 75300455 75300490 35 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ....:.............:................ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 124405312 65809243 +3095 chr4 + 190214555 143335226 143335225 143335261 36 TCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:.:................................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 124405314 65809241 +3217 chr4 + 190214555 143335228 143335227 143335263 36 TTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................:.................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 124405316 65809239 +3069 chr4 + 190214555 143375023 143375022 143375094 72 CTGCAACCTCCGCCCCCTGGGCTCAAGGGATTCTCATGCTTCAGCCTCCTGAATAGCTGGAATTATAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x.::.....:.....x.x...x..x.x:.......::::.:.........:..:.x.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 125177897 65036658 +3605 chr4 + 190214555 143379662 143379661 143379735 74 CTGCAGCCTCGACCTCCTGGGCTCAAGTGATCTTCCCACCTCAGTCTCCTGAGTAGCTGGCACTACATGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.......x.::x.xx:x.....:..::::.........x......:...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 125182536 65032019 +3401 chr4 + 190214555 143387108 143387107 143387184 77 AGGTGATTGGTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTGAGACAGAGTTTCGCTCTTTTTGCCCAGACTGGAAT chr4 - 94230402 39858683 39858682 39858759 54371644 54371643 54371720 77 AGACGGTTGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGACAATGACTGTTACTTTGGCTGCCTATGCCAAAAT ..::.:...x...........................x..x..x.xx..x.x.::..:.xx:....:.x:.:::... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 103528425 86686130 +3028 chr4 + 190214555 143499605 143499604 143499678 74 CTGCAACGTTGAACTCCTGGGCTCAAGCAATCCTCCAGCCTCAACCTCCCAAAAAGCTGGTACTAAAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.x:x:.:..:.....:.....::x.:.x.x:.x....:...::...:x......x....x.x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 125302479 64912076 +3972 chr4 + 190214555 143574053 143574052 143574119 67 CTGCAGCCTCAAACTTCTGGGTTCAAGTAATCCTCTCACCTCAGCCTCCCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.....:x..:...............:x.:.x.xx:x........::...........:...... 67M 52/67 77.6% 67/94230402 0.0% 0/67 0.0% 125376927 64837628 +3583 chr4 + 190214555 143582958 143582957 143583029 72 ACAGCCTCAACCTCCTGGGCTCAGGTGCTCTTCCCACCTCAGTCTTACAACTAGCTTGGACTACAGGTGCAC chr4 - 94230402 18197128 18197127 18197199 76033204 76033203 76033275 72 ACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......:x..x..:.....:...:.....::x.xx:x.....:...x...x.....x.:......x...... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 125385830 64828725 +3558 chr4 + 190214555 143632710 143632709 143632782 73 CAGGAATGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAGGAAGAAGAATTATCTTAGGTCATACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA .....x.:.....:...:..x........:......x..::x...x.:......:..x:..::::.:x...:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 133746853 56467702 +3138 chr4 + 190214555 143686983 143686982 143687077 95 AGAACTAAGTGAAACTGAAACAAACAAACAAAAAATACAAAAGTTAAATAAAACAAAAAATATATTTTTTTCAAAGATATTATCTTTGAAAAGAT chr4 - 94230402 30085547 30085546 30085629 64144774 64144773 64144856 83 AGGGCCAAGTGAAAACGAAACAAACAAACAAAA-----AAAAATGAAGTAAAATAATTTGTAGCTTTATTTTA-------TGTCTTTGGCAAAAT ..::.:........x:.................-----....:.x..:.....:..xxx:..xx...x...:.-------.:......:x..:.. 33M5D35M7D15M 62/83 74.7% 83/94230402 0.0% 12/83 14.5% 113601436 76613119 +3075 chr4 + 190214555 143722136 143722135 143722209 74 AGTGAGTCAGAGTGCC------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGACAAAGAATGGGAGGGAGAT chr4 - 94230402 82145307 82145306 82145386 12085017 12085016 12085096 80 AGGGATTCAAAGTACACCAGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAGTGGGGT ..x..x...:...:.x------..:::.:.:......:....:.........::.....:....x::.x..:..x.:.:. 16M6I58M 51/74 68.9% 80/94230402 0.0% 6/74 8.1% 61576829 NA +3368 chr4 + 190214555 143739692 143739691 143739787 96 TGAAGTAGAAATCTAAGTTT---ATATATATATATATATATATATATATATATATAT-ATTTTTTTTTTTTTTTAGATTACCACTCAGTTGTCTGAACAT chr4 - 94230402 8681909 8681908 8682008 85548395 85548394 85548494 100 TAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTGATTGTCCAGATGT .:..:.:..x...:.x..:.---...x..........:...::.:.:.:...:....-.:.:............x..xx.x.x:.:::.....:::.::. 20M3I34M1I42M 65/96 67.7% 100/94230402 0.0% 4/96 4.2% 135057783 55156772 +3031 chr4 + 190214555 143739710 143739709 143739769 60 TTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTAGATTACC chr4 - 94230402 92735347 92735346 92735406 1494997 1494996 1495056 60 TTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCC ..::....x.....:...:..:.:..........x.x..:.x.........:x.x..x.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 51004363 NA +3004 chr4 + 190214555 143739715 143739714 143739761 47 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735394 1495009 1495008 1495055 47 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTT .::....x.....:...:..:.:...............:.x...... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 51004367 NA +3175 chr4 + 190214555 143766723 143766722 143766781 59 CCCCTTCCCCTTCCCTTTCCCCTTCCCTTCCCTTCCCTTCCCTTTTTTGCTGAATAATA chr4 - 94230402 89691509 89691508 89691567 4538836 4538835 4538894 59 CCCATTCATCCCCACTTTCCCCTTCCCTTCCACTTCATTCCCTTTGTTGCTCTGTAATA ...x...x:.::.x.................x:.:.x........x.....xx:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 54075214 NA +3099 chr4 + 190214555 143818417 143818416 143818465 49 CCTGTTGGCTTCTTTCTTTTCTTTTTTCTTTTTCTTTTTTTGACAGAGT chr4 - 94230402 16512603 16512602 16512651 77717752 77717751 77717800 49 CCTTTTAGGGTTTTACCTCTCTTTTTTCTTTTTCTTTTTTTGACAAAGT ...x..:.xx.:..x.:.:..........................:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 127305814 62908741 +3147 chr4 + 190214555 143845021 143845020 143845108 88 TACTCTCCTAATGCTTAATTCTGTAAAAATAAATTGCTTACACTTGAAATCTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTGAGAT chr4 - 94230402 34129448 34129447 34129533 60100870 60100869 60100955 86 TACTCTTCGAAG--TTTATTTCATAAAGGGCAATTATTTTTACCTGAAGAATCCTATTTTTTTTTTTTCATTTTTTTTCTCCTGAAAT ......:.x..x--..x...:::....::xx....::..x:..:....:xx.::.x......:......x........:.::...:.. 12M2D74M 58/86 67.4% 86/94230402 0.0% 2/86 2.3% 109715573 80498982 +3368 chr4 + 190214555 143855149 143855148 143855282 134 TGTCTAACCCACGGCCCATGAGCTGCATGAAGCCCAGGAAGGCTTTGAATGTGGCTCAACACATTCAAAGAAAGTTTGTAAACTTTCTTTAAACATTATGAGATTATTTT--GCAGTTTTTGTTTTAAGCTCATCA chr4 - 94230402 75796544 75796543 75796664 18433739 18433738 18433859 121 TATCCAACCCAGGGCCCACGAGCTGCATGCAGCCCTAGACAGCCAGTAATGTGACCCCACAAGGTCACACA---------------CTTCTAGCATTACTATGTGATTTTTAGCAATATGTTTCATGAGTTGATCA .:..:......x......:..........x.....x:..x:..:xxx......:.:.x...x:x...x.x.---------------...:x.:.....:x.x:.x.....--...:.x.x.x.:x.:..:.x.... 71M15D24M2I24M 81/119 68.1% 121/94230402 0.0% 17/119 14.3% 68058605 NA +3365 chr4 + 190214555 143856917 143856916 143857071 155 TGATTACCTTAAATAACTCA----TTTCTGTTTCCAAGCTTCTACTCACAAATGTACTAATGTCCTAAAGGGCATGAAGGAGATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATACACATACATATATATA chr4 - 94230402 37362967 37362966 37363112 56867291 56867290 56867436 146 TAATCACCATAGATATATCTGAGTCCTCTGTATCTCAGTTATTATTTA---------TCATGTTCTGAAAAAATTGCAACAT---TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:..:...x..:...xx..x----::.....x..:x..:.x:..:.:.---------.x....:..:..:::xx..x.:x.x---......:...:x.:......:..::.:.x......xx:.:.....:.:...:...x:.....:.-....:.... 20M4I24M9D25M3D64M1D9M 93/142 65.5% 146/94230402 0.0% 17/142 12.0% 106493950 83720605 +3030 chr4 + 190214555 143857009 143857008 143857071 63 ATATATATATATATATATATATATATATATATATATATATATATATACACATACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.......x.:.:.x...:.:...:..:.:x..::x.:....x......:.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 126336260 63878295 +3156 chr4 + 190214555 143902590 143902589 143902635 46 TTCCTTCCTTTTTCCTTTTCCTTCTTCCTTTCTCTCCCTCTCTGCT chr4 - 94230402 92631100 92631099 92631145 1599258 1599257 1599303 46 TCCTTCCCTTTTCCCTTTTCCCTCTTCCCTTCCCTCCCTCCGTGCT .:.:.:......:........:......:...:.......:x.... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 51271490 NA +4176 chr4 + 190214555 143948102 143948101 143948309 208 CTCTTTTTTCTTCACCTT-CTGATTTTCCACGTTTTCTTTTTCCTGCTTTCCCTTTTCTT---ACTTTACCAT-TTCCTTTTTGTTAAATTTCTGAAGCAGTCGGGAACAAGATATTTTTTCTAACTAATTTC----CCTCTTCCTTCCTTCCTTCCCTTCCCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 19234694 19234693 19234888 74995515 74995514 74995709 195 ctcttctactttcacttttctgctttctcctctcttcttctccctcctttctctctcttctccacttctccctgctcctttcttttccctttct----------------------tcccttTATCTAAACTGAAAGTCTCTTCTTTCTATCCCTCCCCTCCCCCCCTTTTTTTTCTCATTTGTTTTTATTCACTACTTATATCCCTTATTGTTCCT .....:.x::.....:..-...x...::.x:x.:.....:.:...x.....:..:.::.:---....:x..x.-:......:.x..xxx.....----------------------.:::.:..x....x:.x----:......:...:x...:....:.....::.:..::..:..:x:..x..:..x...x..x:..x.x..::.:x..x..:.. 18M1I41M3I10M1I20M22D17M4I80M 120/186 64.5% 195/94230402 0.0% 31/186 16.7% 124713408 65501147 +3272 chr4 + 190214555 143948257 143948256 143948327 71 TTCCTTCCTTCCTTCCTTCTTCTTCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 60054696 60054695 60054766 34175637 34175636 34175707 71 TTCTTTACTTCTTTTCTTCTACTTCTTATCTTCTCCTATTTTTAGTGTTTTCTTTCTGTCTTTTATTTGTT ...:..x....:..:.....x......x...::.:..x.:...xx.x:.........x.....:x..:x.. 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 83893561 NA +3829 chr4 + 190214555 143948260 143948259 143948384 125 CTTCCTTCCTTCCTTCTTCT---TCTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATT--TCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCT-TCTTCTTTCT ..:.........x.x....x---.x:.x..:..:::....:..:...:.:...:x.::..:x.x..:.x..--.:xx....xxx:....x.:.......:...:.........xx..-.:........ 20M3I48M2D44M1D10M 84/122 68.9% 125/94230402 0.0% 6/122 4.9% 100866360 89348195 +3190 chr4 + 190214555 143948333 143948332 143948407 75 TTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTGTCTCTCTTTTCTTTCTTTTACTTTCTTTCTTCTTTTCCA chr4 - 94230402 45600390 45600389 45600464 48629939 48629938 48630013 75 tTGCTATGTTTGTATATCTGTCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTATTCTTTTACA ..x..x.x...x.x.x...x..:x...x.......x..:..:......x.....xx...::...x.......x.. 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 98347943 91866612 +3196 chr4 + 190214555 144009525 144009524 144009649 125 TAATGATTTGTGGGCAGTAGA---ATTTGAAT-TTCATATAATATTCACATTAT-----TATTATTATTTTGATTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA---TGGAGGCTTGTTCT chr4 - 94230402 45399518 45399517 45399654 48830749 48830748 48830885 137 TAAGGCCCTGAAGGCAGAAGATATCTTTCAGTATTCTTAGCATATGCACAGTATATTCTTAGCATAATGTGGATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCTGTATGCAAAAATTTCAAGGCTTTTTTT ...x.x::..x:.....x...---x...x.:.-...x..xx....x....x...-----..x:..x..x.x...:..:.:...:...:................::..:.x.x.x::.:.---.x:......x..:. 21M3I8M1I21M5I61M3I14M 87/125 69.6% 137/94230402 0.0% 12/125 9.6% 98610007 91604548 +3297 chr4 + 190214555 144009567 144009566 144009620 54 CACATTATTATTATTATTTTGATTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 37858574 37858573 37858627 56371776 56371775 56371829 54 CAAATTATGATCAGCACTTTGAATTTTATTCCTTCTTCTTTTTTTTTTTTTTTT ..x.....x..:.x:.:.....x....x...:.....:................ 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 106150993 84063562 +3331 chr4 + 190214555 144009569 144009568 144009676 108 CATTATTATTATTATTTTGATTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGGCTTGTTCTGTCACCCAGGCTGGAGTGCAGTGGCCC chr4 - 94230402 37553518 37553517 37553612 56676791 56676790 56676885 95 CATTATTATTATTAATTAGATTTTTTTGTTGTGGTTTTTTTTGTTCTGTTTTTTTTTCCCCCAGTGGTAGTGTATT----TGTCA---------AATTGCAGCGGCCC ..............x..x.........x:.x.xx........x..:.x.........:::::x.x.:.:.x.xx..----.....---------:.x.....:..... 76M4D5M9D14M 70/95 73.7% 95/94230402 0.0% 13/95 13.7% 106456051 83758504 +3325 chr4 + 190214555 144054502 144054501 144054584 83 CTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTCAGAGTCTCGCTCTGTCAGCCAGGCTGGAGTGCAGAGGCAGAACCTCAGCTC chr4 - 94230402 90676137 90676136 90676212 3554191 3554190 3554266 76 CTTTGTCTTTTTCTTGCCTTTTTTTTTTTTTCAGAGCTTAGCTCTGTTGGCTCCTCT---GTGT----GCAGATCCCCAGCCC ....x......::..x.:..................::.x.......::..:xxx..---...:----.....x..:....:. 57M3D4M4D15M 58/76 76.3% 76/94230402 0.0% 7/76 9.2% 53378365 NA +3511 chr4 + 190214555 144058219 144058218 144058400 182 TTCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCT--TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCT chr4 - 94230402 45185586 45185585 45185751 49044652 49044651 49044817 166 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTT-CTTTCATTTTTCACCTTTCTT-----------------CTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x...x:..:.:::......xx::..xx.::.:.x:...x:..........-.....x..:..:x:.......-----------------.:......xx:....:....:..:x...xx.--....:x..x::.x.......xx.:x:.::.xx.:::..x..::.....:.:.xx:...:. 52M1D21M17D31M2I60M 102/164 62.2% 166/94230402 0.0% 20/164 12.2% 98872633 91341922 +3141 chr4 + 190214555 144058236 144058235 144058315 80 TCCTTCCTTCCTTCCTTTCTTTCTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...:.:x.x::..x......:.xx::..x.:............:....:.......x...x.x...::.x::.:.:x... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 125069419 65145136 +4157 chr4 + 190214555 144058240 144058239 144058394 155 TCCTTCCTTCCTTTCTTTCTCTC---TTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCATTTTTT-CCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 45185590 45185589 45185741 49044662 49044661 49044813 152 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT---------TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCT ..x..::::.::...:.xx....---.....x:...x........---------..............:-....:...........xx:..:.:....:..:x...--.x:....:x..x::.x.......xx.:x:.::.xx.:::..x..::.....:. 23M3I19M9D15M1I36M2I53M 99/146 67.8% 152/94230402 0.0% 15/146 10.3% 98872650 91341905 +3352 chr4 + 190214555 144058240 144058239 144058319 80 TCCTTCCTTCCTTTCTTTCTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ...:.:x.x::..x........xx.:..x...:..........:..:.........x..xx.xx.....x::.:..x... 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 125069423 65145132 +3017 chr4 + 190214555 144058274 144058273 144058390 117 TTCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 47681993 47681992 47682109 46548294 46548293 46548410 117 TTATTTTCTTCATTTATTCTCATTAATCATTCCCATTAATCTCTTATTTTTTTCCCCATTCATTCCTTCCATTCTTTCCCATTTTTCCCCCATCTGTGCTGATCCAGGTCTTTCTTT ..x...::...x:..x:.:..x..x..:x..:..x.:xx...:.:x..:...:.::.x...x......:.x.......::x:...::::.:x...x.x:.xx.::xxx......... 117M 69/117 59.0% 117/94230402 0.0% 0/117 0.0% 96376281 93838274 +3513 chr4 + 190214555 144058275 144058274 144058420 146 TCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTC chr4 - 94230402 79422434 79422433 79422576 14807827 14807826 14807969 143 TTTATCTTGGTCTGTCGTCTTCTAATTTTTTCCCTCCTT---TCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTTTCTCCTTTGCCATTGTTATTTGAGGCTTTCACTCTCTCTTTTCTCTC .:.x....xx...x..x.::.:.x.........:.....---..:x.:.........:xx.x.:...x::...:xx....:.::x::.::x.::.xx.....:::..x.:x.:x..x...xxxx.....x:...:::..:...... 39M3D104M 86/143 60.1% 143/94230402 0.0% 3/143 2.1% 64635841 NA +4137 chr4 + 190214555 144058275 144058274 144058444 170 TCTTTCTTTCTCTTTCTTTCTTTCATTTTTTCCTTCCTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCT chr4 - 94230402 45185590 45185589 45185751 49044652 49044651 49044813 162 TCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCT---TTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC-------CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..:.::.....:..xx::.:x:....:.x....x........---....:...x..::.:x.:..::..........xx:....:.-------......:x...--.x:....:x..x:::x.......xx.:x.::::xx.....:x:...:..:.....xx.:..:. 45M3D41M7D11M2I63M 102/160 63.8% 162/94230402 0.0% 12/160 7.5% 98872685 91341870 +3299 chr4 + 190214555 144058332 144058331 144058458 127 TTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT---TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTT--TCTTCTTTT chr4 - 94230402 86872030 86872029 86872158 7358245 7358244 7358373 129 TTCCTTCCTCTTCTGTCTGCATTCTAATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCT---CTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTTTTCTCCCCATCTCAGCCATGGTCTCCTTTT .........:.::.x::.x.x....xx:.:.xx.:...:..---.:..:..:x.:.....:...---.....:..:..x:...:....xxx::.::..........::.:x.:..xx:.x.--...:..... 41M3I20M3D54M2I9M 80/124 64.5% 129/94230402 0.0% 8/124 6.5% 57186302 NA +3062 chr4 + 190214555 144058403 144058402 144058453 51 CTTTCTTCTTTCTCTCTCTCTCTCTCTTTTCTTTCTTTTTCTTTCTTTCTT chr4 - 94230402 36600614 36600613 36600664 57629739 57629738 57629789 51 CTCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTT ..:::..:..:........:..:..:.:.....:.....:x.......:.. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 107457789 82756766 +3126 chr4 + 190214555 144099838 144099837 144099927 90 TGGCCAACATGGCGAAACCCCGTCTCTATTAAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACCAAAAACAAACAAAAAT chr4 - 94230402 94016321 94016320 94016397 214006 214005 214082 77 TGGCCAAGATAATGGAA-------------GATGACAAAGGAAAAAAAGAAAAGAAAAAAAACCAACAAATGCCAAAACTAAACAAAGAT .......x..:::.:..-------------:.x:.:.x.::.......:....:........xx......x:......x:.......:.. 17M13D60M 56/77 72.7% 77/94230402 0.0% 13/77 16.9% 50083517 NA +3058 chr4 + 190214555 144099873 144099872 144099925 53 TACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACCAAAAACAAACAAAA chr4 - 94230402 88022623 88022622 88022675 6207728 6207727 6207780 53 TACAGAAAAAAAAAAAAAAACAGAAAAACAACAATAACAACAAGCCAACACAA ....:...............x.:.....x.....x...x.x..:.x....x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 56077250 NA +3499 chr4 + 190214555 144137763 144137762 144137816 54 TCCTTCCCTTTTTCCTTTTCTTTCTTCCTTCCTCTCCCTCTCTGCTTCTCTCTC chr4 - 94230402 92631100 92631099 92631153 1599250 1599249 1599303 54 TCCTTCCCTTTTCCCTTTTCCCTCTTCCCTTCCCTCCCTCCGTGCTGCTGTCCC ............:.......::......:.:.:.......:x....x..x..:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 51506663 NA +3314 chr4 + 190214555 144199470 144199469 144199530 61 AAACAAACAAACAAACAAAAAGAAAAACAAAAAACAACCCATCATCAGAGTGAACAGGCAA chr4 - 94230402 13051455 13051454 13051515 81178888 81178887 81178948 61 AAAAAAACAAACAAACAACAACAACAACAAAAAACAACGCAAAACCTGAGTGAAAACACAA ...x..............x..x..x.............x..xx.:.x.......x.x:... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 131148015 59066540 +3303 chr4 + 190214555 144265441 144265440 144265518 78 AATTCTAACAAAGCTTCCTCATCTATCACAGATAAGGAAACTAAGGCTAAGAAAGTTTAAGTAACTTGCCTAAAGTTA chr4 - 94230402 88597902 88597901 88597979 5632424 5632423 5632501 78 AAATCTAAATGTGCTTTACCCTCTTTAAAAGGCTAGGAAATTAAGGTAAGGAAAGGTTAAGTAACTTGTATAAGGTTA ..x.....xx:x....:x:.x...x.x.x..::x......:.....:x.:.....x............:x...:.... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 55667539 NA +3237 chr4 + 190214555 144307518 144307517 144307588 71 GTGTATATATGTATATATACACGTGTATATGTACACGTGTATATGTGTATATATACACGTGT-ATATGTACA chr4 - 94230402 37363041 37363040 37363112 56867291 56867290 56867362 72 GTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA .....:...:x.:........:.:::.x..:..:xx..............:...x...::::-.......:. 62M1I9M 51/71 71.8% 72/94230402 0.0% 1/71 1.4% 106944477 83270078 +3407 chr4 + 190214555 144307554 144307553 144307632 79 GTGTATATGTGTATATATACACGTGTATATGTACACGTGTATATGTGTATATATACACATATATATACACATAATACAT chr4 - 94230402 37363041 37363040 37363118 56867285 56867284 56867362 78 GTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATAAAATAT .....:..::x.:........:.:::.x..:..:xx..............:...x....:.:.-...:::....x.:.. 63M1D15M 55/78 70.5% 78/94230402 0.0% 1/78 1.3% 106944513 83270042 +3253 chr4 + 190214555 144400926 144400925 144400979 54 AGCAAGACTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGTAGTACTTAAGTGGAA chr4 - 94230402 63265277 63265276 63265330 30965073 30965072 30965126 54 AATAAGATTGTCTGAGGGAAAAAAAAAAAAAAAAAAAGAAGTGTTTGCGTGGAA .::....:.....x.:::....................x...::..:x...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 81135649 NA +3417 chr4 + 190214555 144409887 144409886 144410026 140 GAAAGAAGGAAGAAAGGAGAAGGGAAGAAGGAAGGAAGGAAGGATGGAAGGAAGGAAGGAAAAAAGAAG-------GGAAAGAGAAGGGCGATAGGAAGGGATGATGGGAAGAAGGGAATAATAAGTGAGGGGGGAAAAACAAGAGG chr4 - 94230402 60249505 60249504 60249651 33980752 33980751 33980898 147 GGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAACTTGTCAGAGACCAGCAAAAGGCAAGAAG .::.x.:.:...::...:....x:x.....:......x.......:...xx.....x:...x...:.::-------:.:..x.:..x.:.x.x..:.xxx..x.xx:.:...x..::.x.x:.x..x..xx:.x:...::.....:. 69M7I71M 85/140 60.7% 147/94230402 0.0% 7/140 5.0% 84160382 NA +3065 chr4 + 190214555 144426920 144426919 144426974 55 TTTGTATGCAGATAGGTATATATATAGAGAGAGAGATGTGTGTACGTATGTATGA chr4 - 94230402 40486744 40486743 40486798 53743605 53743604 53743659 55 TTTCTATGTATATAGGGATATATATGGAGAGAAAGATATTTATTTATATGTGTGA ...x....:.x.....x........:......:....:.x.:.x::.....:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 103940176 86274379 +3552 chr4 + 190214555 144441496 144441495 144441620 125 ATATGTATATGTATATGTATATAATATATATTTATATTTTTATATATATAATATATATTTATATTTTTTATATATAATATATATATATATTTATATATATATATTTAAAGAAAGAACTACCTGAG chr4 - 94230402 3024341 3024340 3024458 91205945 91205944 91206062 118 ATAGATTTACGTAGAGATATATGCTATATATAC-------TATATATATAGTTTATATTTTTTATCATCAAATCTATTACATATCTATGTATACGTATATAAACACAAAAAAACAAGGAGTTGAG ...x:.x..:...x.x:.....:x.......x:-------..........:.x.......x.xx.:x.:.x..x..x..:....x...:.x..::......x.:x:...:...x..xx.x:.... 33M7D85M 80/118 67.8% 118/94230402 0.0% 7/118 5.9% 141417155 48797400 +3191 chr4 + 190214555 144470680 144470679 144470750 71 TGTCTGTTGTTGTTGTTGTTGTTGTTCTGTTTTATTCTATTAAATGTTTATAAAGCGTTCTTGGAATGACA chr4 - 94230402 65458208 65458207 65458277 28772126 28772125 28772195 70 TGTTTTTTGTTGTTGTTGCTGTTGTTTTAGTTTAGTCAATTTATTTTTAATAAAGCAGT-TTAAAGTGACA ...:.x............:.......:.:x....x..x...x.x.x..x.......:x.-..::.:..... 59M1D11M 53/70 75.7% 70/94230402 0.0% 1/70 1.4% 79012472 NA +3047 chr4 + 190214555 144491950 144491949 144492007 58 TGCTGTTATTGTTGTTGTTGTTGTTTGTTTTTTGTTTTTTTTGAGACAAGTTCTTGCT chr4 - 94230402 2688648 2688647 2688705 91541698 91541697 91541755 58 TACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTTAAATGTTTTTTCT .:...x.x......................x.........x.xxx.x.x...:..x.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 141803302 48411253 +3323 chr4 + 190214555 144529725 144529724 144529779 55 AAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAAATTTAAAGGTCATTTCATTTCG chr4 - 94230402 93614020 93614019 93614072 616331 616330 616383 53 AAAAAAAATGTAGAAGAAGAAGAAAGAAAGAAGATTTAAA--TCCTTTTACTTTG ........x.x.....................:.......--..x...:.:..:. 40M2D13M 46/53 86.8% 53/94230402 0.0% 2/53 3.8% 50915705 NA +3353 chr4 + 190214555 144681364 144681363 144681447 84 TTTGCTTTTGCTCTTCAGAGCTTCTTGGACTTCAAAAGTCTATCGGATTGCAGAGTTCTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 9014205 9014204 9014288 85216115 85216114 85216198 84 TTTACTTTTATTATTAAAATATTGTTTGAATTCAAACATCTACTGGTAAACCAAGAGCTTTTTTCTTTTTTTTTTTTCTTAAGA ...:.....::.x..x.:.xx..x..x..x......x:....::..xxx:.x:..xx.......:............:..:... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 135667159 54547396 +3165 chr4 + 190214555 144684187 144684186 144684275 89 ACATGACAAAACCCGTCTCTATGAAAAATACAAAA-AAAAAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50001450 50001449 50001539 44228864 44228863 44228953 90 ATGTGAAACTACATGTTTATTTTAACATCACAGAAGAAAAAAAAGCATCTTTTTTACATACTTTTTCTTTTCCCTTTTTTTTTTTTCCTT .::...x.xx..x:..:.x.x.x..x.x:...:..-.........x..:......x:x.x:.....:....:::............::.. 35M1I54M 61/89 68.5% 90/94230402 0.0% 1/89 1.1% 94682737 NA +3008 chr4 + 190214555 144684218 144684217 144684271 54 AAAAAAAAAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 86453177 86453176 86453230 7777173 7777172 7777226 54 AAAAAAAAAAAAAAATTGAACTTCTCTTATGTTTCTTCTTCTTTTTTTTTTTTT ............:....xxx:..:.:..x.x...:..:..:............. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 58231041 NA +3268 chr4 + 190214555 144687751 144687750 144687815 65 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTATTGGCCTATAGGTCATCTCAGCATTATCAAAA chr4 - 94230402 64830569 64830568 64830633 29399770 29399769 29399834 65 CTTTTTTTTTTTTTTTTTTTGCTTTTCTTGCTAGAGATCTCTGGTTCATTTGGTCATTTTCACAA ....................x:....:......xx.::..x.:.x....:.x:x....x...x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 79857182 NA +3100 chr4 + 190214555 144724635 144724634 144724691 57 TATCAGTCTTCTTTTGTGTGTGTGTGTGTGTGTGTATATATATAT-----ATTTATATATAT chr4 - 94230402 19559282 19559281 19559343 74671060 74671059 74671121 62 TAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ..x.x:.:..:..................:.:.:..........:-----....x.:..... 45M5I12M 46/57 80.7% 62/94230402 0.0% 5/57 8.8% 125165353 65049202 +3020 chr4 + 190214555 144724645 144724644 144724689 45 CTTTTGTGTGTGTGTGTGTGTGTGTATATATATATATTTATATAT chr4 - 94230402 9151849 9151848 9151893 85078510 85078509 85078554 45 CTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .....xx................:......x....x.x....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 135572796 54641759 +3081 chr4 + 190214555 144724654 144724653 144724691 38 GTGTGTGTGTGTGTGTATATATATATATTTATATATAT chr4 - 94230402 9151856 9151855 9151893 85078510 85078509 85078547 38 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT .......................x....:.:....... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 135572798 54641757 +3247 chr4 + 190214555 144724657 144724656 144724732 76 TGTGTGTGTGTGTATATATATATATTTATATATATATATAAGTATATATATATGTATGTATGCATATATATATATA chr4 - 94230402 68323944 68323943 68324019 25906384 25906383 25906459 76 TGCGTAGTTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTA ..:..:xx.:......x::..:.:.........:x...x....:.::.::.x.::.........x.:.x....:.. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 76400713 NA +3091 chr4 + 190214555 144741315 144741314 144741392 78 TTGAAAATAATTACAAAATAGTATACTAACAATTTTAATCCATTTGCTGTTTTTTTTTTTTTTTTGGTTTCTTTTTTT chr4 - 94230402 46959160 46959159 46959237 47271166 47271165 47271243 78 TTCAAAACATTTGCAAAATATGGCACAGATTGTTTTAATGCAATTATTCCCCCTTTTTTTTCTTTCTTTTCTTTTTTT ..x....:.x..:.......xx::..x:.:x:.......x..x..::.x::::........:...xx........... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 97782155 92432400 +3566 chr4 + 190214555 144742020 144742019 144742091 72 TATATATGTGTATG----TGTATATATATATGTATGTATATAT--ATACACACACACACACACATACATACATACATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:....:..:----.....x..:.........:x..:..--...................x...:.x..:x... 14M4I25M2I33M 58/72 80.6% 78/94230402 0.0% 6/72 8.3% 136346227 53868328 +3700 chr4 + 190214555 144742023 144742022 144742098 76 ATATGTGTATGTGTATATATATATGTATGTATATATATACACACACAC--ACACACATACATACATACATACATATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:...........::...x.:......x..:....:..::.x:...:--.:.....:...:...:...x...:.x.. 48M2I28M 56/76 73.7% 78/94230402 0.0% 2/76 2.6% 136346235 53868320 +3280 chr4 + 190214555 144742028 144742027 144742106 79 TGTATGTGTATATATATATGTATGTATATATATACACACACACACACACATACATACATACATACATATATTCTTTTTC chr4 - 94230402 4481679 4481678 4481757 89748646 89748645 89748724 79 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATC .........x.x:.....x..:...:...:.::...x...:.....:x..:.:.:x.xx.....:..:..:x.x..x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 140260349 49954206 +3644 chr4 + 190214555 144768267 144768266 144768340 74 CTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..::..........::x...x.xx.x........::.:.........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 126571141 63643414 +3009 chr4 + 190214555 144802059 144802058 144802121 63 TGTATATATATATATATATATATATATATGTATATGTATATATATATATATGTATATGTGTAT chr4 - 94230402 71630143 71630142 71630205 22600198 22600197 22600260 63 TGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:.....:.:.:.:.x.....:....x.x.:....:..:.:.x.::..:..x........:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 73171916 NA +3504 chr4 + 190214555 144852730 144852729 144852798 69 ATTTTCATTATCCCCATTTTATAGATGAGAAAGCTGAGGCAGAAACAGGTTGTGTATCTTTCCCAAGGT chr4 - 94230402 10729193 10729192 10729261 83501142 83501141 83501210 69 ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ...x::..:.x.:........:..:..:....:........x.x.......:x...x:..x....::.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 134123537 56091018 +3419 chr4 + 190214555 144887967 144887966 144888027 61 CTCCTGGTTTCAAGCAATTCTCCTGGCTCAGTCTCCCAAGTAGCTGGAATTACAGGCACAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:....x......::x...x.xx.......:..::.............:....x.::... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 126690828 63523727 +3444 chr4 + 190214555 144945957 144945956 144946028 72 CTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::........::x...x.xx.x........:............:.:....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 126748831 63465724 +3128 chr4 + 190214555 145001225 145001224 145001286 62 AGGGAAGGAGGGAGTGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAAAGAAGAAAAGAAAAGA chr4 - 94230402 87012026 87012025 87012085 7218318 7218317 7218377 60 AGGGAAGA--GAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAA .......:--.:.xx.:......::...:.......:..:..:..x.:.......:....:. 8M2D52M 45/60 75.0% 60/94230402 0.0% 2/60 3.3% 57989199 NA +3210 chr4 + 190214555 145001231 145001230 145001287 57 GGAGGGAGTGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAAAGAAGAAAAGAAAAGAA chr4 - 94230402 87012029 87012028 87012085 7218318 7218317 7218374 57 GAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAA .:..:..:..:...::......:...::..:.......:.x:..::...:....:.. 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 57989202 NA +3088 chr4 + 190214555 145022835 145022834 145022944 110 TATATTTTAGGATGATTAATATATGAGTCATTCTTTTATGTATTTTTGTATTATTATACTTAAAGTTTTAGGGTACCTGTGCACAACATGCAGGTTTGTTACATATGTTT chr4 - 94230402 68982124 68982123 68982231 25248172 25248171 25248279 108 TATATCTCTGGAAAACCCTGACTTGACTCACTATTTTCTGTATTTTCATGGTATTATATTTAAAGTAAAAAAAAACACGTGAAAAAAATGCAGA--TATTATTAATGTTT .....:.:x...x:.::xxx.:x...x...:.x....x........::.:x.......:.......xxx.:::x..x:...x.x..x......:--.:...:xx...... 94M2D14M 70/108 64.8% 108/94230402 0.0% 2/108 1.9% 76040711 NA +3316 chr4 + 190214555 145026912 145026911 145026983 72 TATACATACATATATATATATATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATA chr4 - 94230402 37363042 37363041 37363112 56867291 56867290 56867361 71 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:.......x.:......:..::.:.x......xx....:.:.......:...x:.:.:.:.-....:.... 62M1D9M 52/71 73.2% 71/94230402 0.0% 1/71 1.4% 107663870 82550685 +3080 chr4 + 190214555 145026913 145026912 145026991 79 ATACATACATATATATATATATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATTTT chr4 - 94230402 19704280 19704279 19704357 74526046 74526045 74526123 78 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACA-ATATTTT .......:...::.......x.:.:...:.x:..............:x..x.xx:.:.x.x.xx..x..:.-....... 71M1D7M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 125322633 64891922 +3334 chr4 + 190214555 145026913 145026912 145027022 110 ATACATACATATATATATATATATATATATATATGT-------GTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681890 56681889 56682004 37548399 37548398 37548513 115 ACACGGACATA-ATGTAAATTTATATATACA-ATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG .:..:x.....-..:..x..x........:.-....-------:.:.:xx.x.x:......x:.:....x:.:...:....:.xxx.......x...x...x....x.......... 11M1D19M1D4M7I74M 78/108 72.2% 115/94230402 0.0% 9/108 8.3% 88345023 NA +3187 chr4 + 190214555 145026929 145026928 145026991 63 ATATATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATTTT chr4 - 94230402 1888773 1888772 1888835 92341568 92341567 92341630 63 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTT .....:....:..:.xxx...:x.x......:.......:....:x..x.:.:.......... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 143138156 47076399 +3187 chr4 + 190214555 145026929 145026928 145026991 63 ATATATATATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATTTT chr4 - 94230402 1885632 1885631 1885694 92344709 92344708 92344771 63 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTT .....:....:..:.xxx...:x.x......:.......:....:x..x.:.:.......... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 143141297 47073258 +3205 chr4 + 190214555 145026946 145026945 145027022 77 TGTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT------TTTTTTTTTTTG chr4 - 94230402 15882773 15882772 15882855 78347548 78347547 78347630 83 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTG ..x..........:.:.........:..xx.:.:.xx:.x.x...:..x...x....x..x....------......:..... 65M6I12M 58/77 75.3% 83/94230402 0.0% 6/77 7.8% 129144173 61070382 +3047 chr4 + 190214555 145026947 145026946 145027029 83 GTGTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT-------TTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 15882776 15882775 15882865 78347538 78347537 78347627 90 GTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTTGTTAAAAGAAA ............:.........:..xx.:.:.xx:.x.x.x.:..x...x....x..x...-------......:....x..:.:.x.:. 61M7I22M 60/83 72.3% 90/94230402 0.0% 7/83 8.4% 129144171 61070384 +3005 chr4 + 190214555 145026949 145026948 145026998 50 GTGTGTGTGTATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 34066892 34066891 34066941 60163462 60163461 60163511 50 GTGTGTGTCTCCACATTTATATATACACATATATATATATTTATTTTCCT ........x.x:.:..x........:.:..............x....::. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 110960057 79254498 +3291 chr4 + 190214555 145026954 145026953 145027009 56 TGTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::...x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 52291606 NA +3236 chr4 + 190214555 145026955 145026954 145027020 66 GTGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865453 4865452 4865518 89364885 89364884 89364950 66 GTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..:x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 140161502 50053053 +3627 chr4 + 190214555 145026956 145026955 145027011 56 TGTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:....x.....:...:..:.:...............:.x.........:.x... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 52291608 NA +3084 chr4 + 190214555 145026957 145026956 145027020 64 GTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865453 4865452 4865516 89364887 89364886 89364950 64 GTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTT ...x.x..............x.:x.x...x.xxx.:.........x..x....x.......... 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% 140161504 50053051 +3282 chr4 + 190214555 145026958 145026957 145027013 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 52291610 NA +3017 chr4 + 190214555 145026959 145026958 145027018 60 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865459 4865458 4865518 89364885 89364884 89364944 60 ATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..............x.:x.x...x.x.xx:.........x..x....x..........:. 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 140161500 50053055 +3068 chr4 + 190214555 145026960 145026959 145027015 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 52291612 NA +3121 chr4 + 190214555 145026960 145026959 145027013 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 140826686 49387869 +3043 chr4 + 190214555 145026962 145026961 145027023 62 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::....x.....:...:..:.:....x.x.x......:.x.........:.x...:::... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 52291614 NA +3222 chr4 + 190214555 145034522 145034521 145034573 52 TTTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704275 19704274 19704326 74526077 74526076 74526128 52 TCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .:..x...:.......::.....:.x.....:...x::.............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 125330247 64884308 +3125 chr4 + 190214555 145034524 145034523 145034569 46 TATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704281 19704280 19704326 74526077 74526076 74526122 46 TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..:.......::.......x.....:...x::.............. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 125330243 64884312 +3225 chr4 + 190214555 145034525 145034524 145034571 47 ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704280 19704279 19704326 74526077 74526076 74526123 47 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ...:.......::.......x.....:...x::.............. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 125330245 64884310 +3108 chr4 + 190214555 145034526 145034525 145034578 53 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...:.......::...:.:.x.....:...x::..............x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 125330249 64884306 +15258 chr4 + 190214555 145035131 145035130 145035375 245 AGGATGTGAGGGCAATCCGGCTGCGACATCTGTCACCCCACTAATCACCAGAGTTGATTTCAGCTGATCTAGCTGGCTAGATTGGTATTAACTTCCTCCCTCACTGCTCTGTGTGCATCTCTCCCAAAGCTGTGTGCTTGGTCAAAGAGGACGACCCTCCCTAATAGAGGAGG-ACCACTCTTTGGTCAAGAATATACGAGTAGCTGTGCTTCCCTCACAGAATCCCCAAACAAGCTCTCAAGATT chr4 - 94230402 69279861 69279860 69280104 24950299 24950298 24950542 244 aGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTT-GGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACG-GTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTCAAGAAATT .............:...:......................:.:........:........-:........:.........:.x...:.:xx.......:.....:....::.....:..:.....:......:::........:............:....::......:x..-...::..x.::......::......-.......:...:....xx:....:.:............xx:.:... 60M1D112M1I25M1D46M 196/243 80.7% 244/94230402 0.0% 3/243 1.2% 75755270 NA +3049 chr4 + 190214555 145038992 145038991 145039067 76 ACAATAAAAACAATGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTAACTAAGGCAAAACCTATAAGAA chr4 - 94230402 62774710 62774709 62774785 31455618 31455617 31455693 76 ACAACCAAAAACAAATCGCCAAAAGAAAAACAAAAAAAAACCAAAATAAGCCAAACCAAGGGGAAAAAAATAAGAA ....:x....xx.x:..x.x....:.....x.........xx....x...x.x...:....x:...xxx....... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 82264282 NA +3132 chr4 + 190214555 145072000 145071999 145072039 40 AAAAAAAACACAAAAAAAACAAAAAAAAACTAGGTAGGGT chr4 - 94230402 34932964 34932963 34933003 59297400 59297399 59297439 40 AAAAAAAACACGAAAAAAACAAAAAAAAACTGAGTAGTGT ...........:...................::....x.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 110139036 80075519 +3687 chr4 + 190214555 145189525 145189524 145189643 119 TTCCTTTTCCTTTTTTGTAATCCCTGTATAT-CACACACACACATGCACACACACACACAAACACACACACACACACACACCCCCACCAA-----------GTCTCCAGATAACTACCGATCTGTTCTTTG chr4 - 94230402 80495418 80495417 80495539 13734864 13734863 13734985 122 TCCCTTTGTCTTTCTC----TCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCACCCCAAGCAATGGAGTTCTGTGCCTC-----AACCATCGCTCTGATCTCTG .:.....x:....:.:----..x.::.....-....x...x.:............x..xx.::...x........:.x......x.x...-----------.:...-----...:.:..x....x...:.. 16M4D11M1I58M11I5M5D20M 83/110 75.5% 122/94230402 0.0% 21/110 19.1% 64694107 NA +3129 chr4 + 190214555 145191557 145191556 145191633 77 CTTTTCAGTTTGGGCCACAAAATAAGTCTAGTTTCCCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGAAGT chr4 - 94230402 33894589 33894588 33894665 60335738 60335737 60335814 77 CTTTGTAATTTAGAGCACAAAACCATTTTAAATCCCTTTACCTTTTTCTTTTCTAATTGCTTTCTTTGACATGAAGT ....x:.:...:.:x.......:x.x.:..:x.:..::.:.:.....:....:.xx..x:...:.....x:...... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 111296968 78917587 +3054 chr4 + 190214555 145201809 145201808 145201865 57 TAAGAAAAGATACACAGAGCAGAATTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTG chr4 - 94230402 15704850 15704849 15704906 78525497 78525496 78525553 57 TACGAATTGATATATTTAGGAGAGTTTCTCCTTTCTTTCTTCCTTTTATTTTTTTTG ..x...xx....:.:xx..x...:...:.:...........:.....x......... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 129496959 60717596 +3238 chr4 + 190214555 145221952 145221951 145222070 119 GACTGTCTCAAA-ATAAAGCAA---GAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGG---GAATGCTTGTACA chr4 - 94230402 36858268 36858267 36858393 57372010 57372009 57372135 126 GGCTGCCTGAAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTTCTTACA .:...:..x...-..xx.:...---..:.:.x..xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::........:.---.x...:.:x.... 12M1I9M3I85M3I13M 78/119 65.5% 126/94230402 0.0% 7/119 5.9% 108363684 81850871 +3001 chr4 + 190214555 145258870 145258869 145258915 46 AAAAAAAAAAAAAAAAAAAAACACCAAAACCAAAAACAAAAAAACC chr4 - 94230402 33205669 33205668 33205714 61024689 61024688 61024734 46 AAAAACAAACAAACAAAAAAAAACCAATACCAAAAAAAAAAAAACC .....x...x...x.......x.....x........x......... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 112053201 78161354 +3082 chr4 + 190214555 145260882 145260881 145260931 50 TCTCAA----AAACAAAACAAAACAAAACAAAACAAAAAAACAAAGAAATTTCA chr4 - 94230402 1220214 1220213 1220267 93010136 93010135 93010189 54 TCTCAAGGGCAAAAAAAAAAAAACAAAACAAAACAAAGAAACAGAGAAGTCCCA ......----...x....x..................:.....:....:.::.. 6M4I44M 43/50 86.0% 54/94230402 0.0% 4/50 8.0% 144040668 46173887 +3383 chr4 + 190214555 145284649 145284648 145284721 73 TGCAGCCTTGATCTCCCGGGCTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.....:x:.x..:.:...:.....::x.:.x.xx:x........::::.........:......x...... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 127087522 63127033 +3703 chr4 + 190214555 145294278 145294277 145294344 67 CTGGGTTCAAATGGTTCTCATGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTATGAGCCACCATG chr4 - 94230402 18197142 18197141 18197206 76033197 76033196 76033261 65 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..........:..x...x..x.x........::..................x.--..x:....::.. 53M2D12M 53/65 81.5% 65/94230402 0.0% 2/65 3.1% 127097136 63117419 +3046 chr4 + 190214555 145306914 145306913 145306981 68 ACAGAGCAAGACTCCATCTCAAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAACAAAAA chr4 - 94230402 87979312 87979311 87979379 6251024 6251023 6251091 68 ACAGAGCAAAAGCCTCTTTTAAATTGGAAAAAAAACCAACAAAACCAACAAAAACAAACAAACAAAAA .........:.x:.:x.:.:...xxx:...x.....x..xx...x...x.x................. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 57327602 NA +3035 chr4 + 190214555 145306949 145306948 145306982 34 CAAAACAAAACAAAACAAACAAACAAACAAAAAG chr4 - 94230402 49148769 49148768 49148802 45081601 45081600 45081634 34 CAAAATAAAACAAAACAAACAAACAAACAAAAAG .....:............................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 96158180 94056375 +3403 chr4 + 190214555 145328407 145328406 145328470 64 AGAGAGGGAGGGAGGGAAGGGAGGAAGGGAGGGAGGGAGGGAAGGAAGAGGATGAGAAAAGAGA chr4 - 94230402 7707309 7707308 7707370 86523033 86523032 86523094 62 AGAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGG--GAGAAAAGGGA ....x..:....:..xx:.......::::............:.x.:.....--........:.. 51M2D11M 48/62 77.4% 62/94230402 0.0% 2/62 3.2% 137621098 52593457 +3070 chr4 + 190214555 145331564 145331563 145331605 42 GTTTCTCTCAGCTTTTTTTTTTCCTTCTTTTTTTTTTCTTCT chr4 - 94230402 88894417 88894416 88894458 5335945 5335944 5335986 42 GTTTTTCACAGCTTTTTTTTTTTCCTTTTTTTTTTTCCTTCT ....:..x..............:.:.:.........:..... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 56437147 NA +3154 chr4 + 190214555 145417358 145417357 145417468 111 AAGAGCAAGACCCTGTCTTGAAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGA chr4 - 94230402 21758953 21758952 21759058 72471345 72471344 72471450 106 AAGCATAAAAATATGTAATGATAAAAAGATGCAGCCA-----AGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAA ...x::..:.x:x...xx...x.:.....x:x..xx.-----.....::.............:::....x::x..:x....:.xx.....::...xxx......:....:. 37M5D69M 69/106 65.1% 106/94230402 0.0% 5/106 4.7% 123658405 66556150 +3217 chr4 + 190214555 145417359 145417358 145417469 111 AGAGCAAGACCCTGTCTTGAAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAAGAA---AAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAA chr4 - 94230402 55704976 55704975 55705089 38525314 38525313 38525427 114 AAAACAAAATACTGTTCCAAAAAAAAAAGAGAGAGGGAGAGAAAAAGAAGAGGGAGGGCTTTACAAAGCTACTGAAAATAATGGTGTTTAAAGGCTAAGCATAAAAAAAATGAA .:.:...:.:x....::::...:...:........:......:....:.:..::.:.:x---.x:..:xx..x....:x..x:.x.x:x:..:.xx..:x:...:.....x... 59M3I52M 68/111 61.3% 114/94230402 0.0% 3/111 2.7% 89712383 NA +3045 chr4 + 190214555 145417376 145417375 145417446 71 TGAAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGA chr4 - 94230402 36858306 36858305 36858376 57372027 57372026 57372097 71 TGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x...:........:...:.:.x..x.:xx...:.:.:.:::.......::.x..::.:...x.:. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 108559070 81655485 +4074 chr4 + 190214555 145417396 145417395 145417638 243 AGAGAGAAAGGAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAGAAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAGAAAGGAAGGAAGAAAGGAAGGAAGGAAGGAGAAAGGGAGGGAGGGAAGAAGGAAGGAGGGAGGGAGG-------GAAAGAAAGAAAAGAAAGA------------AAGAGAAAGAAAGAAAGA------AAGAGAAAGTAAGTGGGGGAA chr4 - 94230402 75014837 75014836 75015098 19215305 19215304 19215566 262 AGAGACAGAGGATAGAAAA----ATATAAGGCAGAAAAAAGTCAAGA--GAAGCCTTAAAGGATGGCAAAAGAAATAAAAAGAAGCTGGAGAATACAGAACTCAAGAAACAAAAGAATAAAGAATTGCTAGAATTAAAAAAAAAAAAAGGGGGGGGGGAGGGGGGGGTTGCGGGTGCCAGGGAGAATACGCTAAAAGATGAAAGTGGAATATTCATAATTAACAAGAAAATAAAATAAAAATTTACCAACAGAGAGGAAGGCAGAGAA .....x.:....x......----.x.x.:.:......:..:xx:...--...:xxxx....x.x.:x.......:x...:....:xx.:.::.x.x.:.:xxx......x.......x....:.xx.xx::..xx..::..::..::..:::...:..::...::.:xx.x:..x.xx......:-------:.....x::..:x.:..x.------------....:..x:...x...:.------..x...:..x...xx:.:... 19M4D24M2D136M7I19M12I18M6I21M 146/237 61.6% 262/94230402 0.0% 31/237 13.1% 70402559 NA +3349 chr4 + 190214555 145417406 145417405 145417494 89 GAAAGAAAAGAAAAGAAAGGACAGAAAGAAAGAGAGACAG----AAAGAAAAAAGTAAGAAAAAAGAAGGAAAGAGAAAAAGAAAGAAAGAAA chr4 - 94230402 67141263 67141262 67141355 27089048 27089047 27089140 93 GAAAGCTAAGAAGAAAAAGGACTGGGGAAAAAAGTACCAGCAGTAAAGAAAAAAGAGAGCAGAACAGAGGAATAAAAAAGATGGAGAATGAAA .....xx.....:.:.......x.::::...:..x:x...----...........x:..x.:..x::.....x:.:...:.x::....x.... 40M4I49M 61/89 68.5% 93/94230402 0.0% 4/89 4.5% 78276143 NA +3861 chr4 + 190214555 145417574 145417573 145417712 139 AGGGAGGGAAAGAAAGAAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAAAGTAAGTGGGG----GAAGGAGGGAGAAAAGAAAGGGAAAGAAAGAAGAAAGAAAAAAAGCTCATCAGGTGGAAAACACTATTTTAGAGATA chr4 - 94230402 4547796 4547795 4547938 89682465 89682464 89682607 143 AGAGAGGCGGGAGCAGAAATGTCAGACACAGAAAATGAGAGACAGAACAAAGAGAAATAGGGCCCTGAAGGAAAGAAAGAGGAAAGGATCTGAAAGCAGAAACAAAAGAAGCTAGAGAGATAAGGAACTTTAAAATAGAGATA ..:....x:::::x.....x.xx...x.x.....:x:...:.x.:.:x:..::x..:.:...----......::..:.:.:......:xxx.....x.....x....:.....x:xx..:.::::...x:..xxx........ 62M4I77M 86/139 61.9% 143/94230402 0.0% 4/139 2.9% 140869778 49344777 +3284 chr4 + 190214555 145417613 145417612 145417688 76 AAAGAAAGAGAAAGTAAGTGGGGGAAGGAGGGAGAAAAGAAAGGGAAAGAAAGAAGAAAGAAAAAAAGCTCATCAG chr4 - 94230402 79555896 79555895 79555969 14674434 14674433 14674507 74 AAAATACAAGAAA--AATTGAGGGAATGGGGGGGCAGGGAGAGGGAGAGAGAAAAGAAAAAAAAAAAGTGCTTTAG ...:x.x:.....--..x..:.....x.:...:.x.::..:.....:...:.:......:........:x.x.:.. 13M2D61M 53/74 71.6% 74/94230402 0.0% 2/74 2.7% 65861717 NA +3424 chr4 + 190214555 145417963 145417962 145418037 75 TTACCAGCTGTGTGACCTTGGATAAGTCACACTGTCTCTCTGAGTCTCAGTTTACTCACCTCTAAAATGAAAATA chr4 - 94230402 11947208 11947207 11947282 82283121 82283120 82283195 75 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATA .:..:.:............:.:.x......x:x:...x:...x...:......x.:..:x.x.:......xx... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 133470755 56743800 +3361 chr4 + 190214555 145428017 145428016 145428069 53 CTTATTTTGTTGTTTTTGTTCTGTTTTGTTTTGTTTTAGGCTTTTAACAGCCT chr4 - 94230402 14023441 14023440 14023493 80206910 80206909 80206962 53 CTTTTTTTGTTGTTGTTGTTTTGTTTTGTTTTGCTGTAGACTCTTCATAGTCT ...x..........x.....:............:.x...:..:..x.:..:.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 131404576 58809979 +3340 chr4 + 190214555 145471004 145471003 145471133 130 ATTTTGTTCCTTTTTATGGCTGAGTAGTATACCATGGTATACACACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417305 4417304 4417434 89812969 89812968 89813098 130 ATTCATTTTTCTTACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ...:xx..:::..x:...x...xx:.xx.x.x.x..:x..x:.x...:.:.:.............x:x...:..:..::x:x::x::.....:...xx.x::..x..x.....:.:....x...x..... 130M 78/130 60.0% 130/94230402 0.0% 0/130 0.0% 141053699 49160856 +3209 chr4 + 190214555 145471039 145471038 145471136 98 GGTATACACACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATAAC chr4 - 94230402 4417342 4417341 4417439 89812964 89812963 89813061 98 GATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCAC .:.x..x...:.:.:.............x:x...:..:..::x:x::x::....::...xx.x::..x..x.....:.:....x...x.....::x.. 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 141053697 49160858 +3046 chr4 + 190214555 145471041 145471040 145471129 89 TATACACACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417346 4417345 4417434 89812969 89812968 89813057 89 TAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x...:.:.:.............x:x...:..:..::x:x::x::....:::..xx.x::..x..x.....:.:....x...x..... 89M 56/89 62.9% 89/94230402 0.0% 0/89 0.0% 141053695 49160860 +3000 chr4 + 190214555 145471050 145471049 145471134 85 ACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 4417349 4417348 4417433 89812970 89812969 89813054 85 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATA ...:.:.:.............x:x...:..:..::x:x::x::..:..:...xx.x::..x..x.....:.:....x...x.... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 141053701 49160854 +3009 chr4 + 190214555 145471069 145471068 145471115 47 CACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x....::...:..::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 58098322 NA +3131 chr4 + 190214555 145471071 145471070 145471117 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 58098324 NA +3278 chr4 + 190214555 145471098 145471097 145471146 49 ATATATATATATATATATATATATATATATATATATAACTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681978 85548425 85548424 85548473 49 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTT .....x..........:...::.:.:.:...:........:........ 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 136789168 53425387 +3031 chr4 + 190214555 145477942 145477941 145477996 55 TACATATATATACACACACATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 33661790 33661789 33661844 60568559 60568558 60568613 55 TATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT ..:.:.:...:.........x.x........:....xx:.:.x.....:...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 111816152 78398403 +3223 chr4 + 190214555 145515134 145515133 145515200 67 CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGAATGCAAGA---GAGAAAG chr4 - 94230402 58656858 58656857 58656926 35573477 35573476 35573545 69 CTGTG-GAGTGAAGGGGCGTGCGCGCGTGTGTCTGTGTGCGTGTCTGTCTGAATGCAAGACTTGAGAAGG .....-.x...x:x.x.:...:.:.:......x......:........x...........---.....:. 5M1D54M3I7M 53/66 80.3% 69/94230402 0.0% 4/66 6.1% 86858276 NA +3211 chr4 + 190214555 145519033 145519032 145519111 79 TTTCTCTTTTTTTTACTGCCTATTCTCTGAACCATTTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 20742757 20742756 20742835 73487568 73487567 73487646 79 TTTCTTTGTCCTTTGTTAGTTAGTCCTAAAACCAATTTTATCTATCTCAGGTTTACTTTTTTTTCTTTTCTTTTTTTTT .....:.x.::...::.:x:..x..::x:.....x....x.x.x.x.:x....x:.........:....:......... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 124776276 65438279 +3023 chr4 + 190214555 145519069 145519068 145519115 47 TTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 87951250 87951249 87951296 6279107 6279106 6279153 47 TTTTTGGTTGGTTGGTTGGTTGTTTTTTTTTATTTTTTTTTCCCTGA ......x...x........:.x.........x.........:::... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 57567819 NA +3184 chr4 + 190214555 145545519 145545518 145545595 77 TGTGTGGGTTTTTTCATG--AGTATTTTCCTTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTTTGTTATTGTTGTTTT chr4 - 94230402 11838686 11838685 11838761 82391642 82391641 82391717 76 TGTGTG---TTTATCATGGTAATAATTGTATTAAATACCTTTTGTGTGTATGTGTGTGTGTGTCTGTTTTTGGTGTTTT ......---...x.....--.:..x..x:x..:xx.x::..........:.............:....x...x...... 6M3D9M2I59M 58/74 78.4% 76/94230402 0.0% 5/74 6.8% 133706833 56507722 +3376 chr4 + 190214555 145545526 145545525 145545596 71 GTTTTTTCATGAGTATTTTCCTTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTTTGTTATTGTTGTTTTG chr4 - 94230402 8983585 8983584 8983650 85246753 85246752 85246818 66 GTTTTGCAATGAGAAATTT-----TTCTGTTCCTGTGTGTGTGTGCGTGTGTGTTTGTCTCTGCTGTTTTG .....x:x.....x.x...-----..:.x..::............:............:x:..:....... 19M5D47M 52/66 78.8% 66/94230402 0.0% 5/66 7.6% 136561941 53652614 +3331 chr4 + 190214555 145545547 145545546 145545637 91 TTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTTTGTTATTGTTGTTTTGTTTTTTACCAAATTCTAAAGTAAAGTGCATTTTAGTATTTG chr4 - 94230402 20867707 20867706 20867789 73362614 73362613 73362696 83 TTGGCTTTTTTTTTTGTGTGTGTGTGTGTGTGTTTATTCTTTCTCTATTGATCTGCATTAA-----AAAGTA---TGTATTTCAGAGTATG ...x:........x.....................:..x..x:.x.x...x.:.x:.::..-----......---..:....:..x:.x.. 61M5D6M3D16M 63/83 75.9% 83/94230402 0.0% 8/83 9.6% 124677840 65536715 +3074 chr4 + 190214555 145546113 145546112 145546180 68 TGAGTTTGAGAACTGGAGCAACACTGTAGCTGTGATAGTTATTGGCAACTTAATATGAGGTAAAGTAA chr4 - 94230402 6749605 6749604 6749672 87480731 87480730 87480798 68 TGAATTTGAGAACTGGAACTACACTGTCACTGTGATTGTTTCGTGCTACTTCTTGTTAGGCTAAACAA ...:.............:.x.......x:.......x...x:xx..x....xx.:.x...:x..::.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 138796508 51418047 +3074 chr4 + 190214555 145546113 145546112 145546180 68 TGAGTTTGAGAACTGGAGCAACACTGTAGCTGTGATAGTTATTGGCAACTTAATATGAGGTAAAGTAA chr4 - 94230402 6739328 6739327 6739395 87491008 87491007 87491075 68 TGAATTTGAGAACTGGAACTACACTGTCACTGTGATTGTTTCGTGCTACTTCTTGTTAGGCTAAACAA ...:.............:.x.......x:.......x...x:xx..x....xx.:.x...:x..::.. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 138806785 51407770 +3261 chr4 + 190214555 145573153 145573152 145573263 111 AAAAAAAAAAAAAAAAAACAGAAAAAAAAAACCAGCAAGAGAAAATAATAAAAATAAAATAATAAAATTAAAGCTTGGGAGCATGGTCTCTAAGAAATACTTTGTGAAAAA chr4 - 94230402 25075198 25075197 25075308 69155095 69155094 69155205 111 AAAAAAAAAAAAAAAAAACACCCATCCAACACAAAAGCAAACAAACAAAAACAATCAAACAGTATAATAAATGTTAAAAACCACTCATATTAAGAAATATTTTATGGAAAA ....................xxx.xxx..x..x.:x:x:.:x...:..x..x...x...:.:..x...x..x.:.x:::.x..:xxx:x:.........:...:..:.... 111M 71/111 64.0% 111/94230402 0.0% 0/111 0.0% 120497955 69716600 +3015 chr4 + 190214555 145573670 145573669 145573720 51 TTATTATTATTATTATTATCTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGA chr4 - 94230402 22847311 22847310 22847361 71383042 71383041 71383092 51 TTATTAGTGTCAATATTATCTTTTTCTGTTTTGTTTTTTTTTCTCATTAGA ......x.:.:.x............:.x....x.........:.:.x.... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 122726359 67488196 +3320 chr4 + 190214555 145605609 145605608 145605793 185 TTTGCACTGCTGGTAAACTCTCTTTTTTTGTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGGTCTGAAAATGTCTCTACCCTCATTCTTAAAAAACGATTTTATTGAATATAAGATTTTAAATGGCAGTTATTTTCTTTCAACATATTAAAG--ATATTTCACCAGCTCCTGGCTTCCAGTGTTT chr4 - 94230402 34237834 34237833 34238005 59992398 59992397 59992569 172 ttagcatttctgctacaTT---TGTTCTTGTTGGTTTTTTGTTTGTTTGCTTTTCTTTTTTCATTTTAGAAACGTTTTTTCCCCACTCCACACA---------TGTGAATGAGAAAAATCTGCGTGGC---TATTTTCCTTTAAGTTTCTCCAGCAGTACTTCCCAAGCTGGCAGCCTCTCGTATCT ..x...:.x...x..x.:.---.x..:......x...............:..x.:.x....::x.:.::...:..:.:.x...:xx.:.x:.x.---------.:.x:.xx.x..:.x.:.:x:....---.......:..:..xx.x:.xx..--:..:...x.x....xx::..:..:x..:.:. 19M3D72M9D25M3D23M2I31M 107/170 62.9% 172/94230402 0.0% 17/170 10.0% 111367775 78846780 +3104 chr4 + 190214555 145607179 145607178 145607228 50 TGTATTAGGTATTTGTGGTGTGTGTGTGTGTGTGTGTGTATTTGTGGTGT chr4 - 94230402 11838709 11838708 11838758 82391645 82391644 82391694 50 TGTATTAAATACCTTTTGTGTGTATGTGTGTGTGTGTCTGTTTTTGGTGT .......::..::.x.x......:.............x.:...x...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 133768470 56446085 +3187 chr4 + 190214555 145611792 145611791 145611851 60 GAAAGCTACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGA chr4 - 94230402 67652078 67652077 67652137 26578266 26578265 26578325 60 GAATTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ...xx.:....::...x...:...:..x:.:.:.:.:.:..............:....:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 77959714 NA +3450 chr4 + 190214555 145633102 145633101 145633217 116 GCATTCTTCAGTATGCCAGTTGCATTTAATCTCCTTGTTAAATTTATTTGATAGAATTCTGAATCCTTTCTTG-TGGTATCTTGAATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50186820 50186819 50186931 44043472 44043471 44043583 112 GCATTTTTATATAGGCTTTTTAAACTTGATTTC-----TGATTTTGCATAGTTGTGTTTTAGATTTTTTTTTCCTGATATGTTGACTTTCTTCTTCATTTTTTCTTTTTTTCTTTTT .....:..xx:..x..:xx..:x.:..:..:..-----.:.x...::x.::.x.x:..:.::..::...:..x-..:...x....x......:...x......:.......:..... 33M5D35M1I43M 74/111 66.7% 112/94230402 0.0% 6/111 5.4% 95446282 NA +3690 chr4 + 190214555 145688850 145688849 145688933 84 AAGAGCCAGGCAATAGCTGAGACACTCTCAAAATAAATA----AACAAACAAACAAACAACAACAACAAAAAGGTGAGGTCTTGTTCT chr4 - 94230402 35083905 35083904 35083992 59146411 59146410 59146498 88 AAAAGACAGACAGTATTTGGGAAAATACCCAGTTAAATACAAAAACAAACAAACAAACAACAACAACAAAAACGGGAAGAATAGTTTT ..:..x...:..:..x:..:..x.x.x:.x.:x......----.............................x.x..:.xx.x...:. 39M4I45M 63/84 75.0% 88/94230402 0.0% 4/84 4.8% 110604945 79609610 +3540 chr4 + 190214555 145697036 145697035 145697080 45 AAAACAAAACAAAACCAACCAACCAACCAAACAAACAAACAAAAA chr4 - 94230402 63063423 63063422 63063467 31166936 31166935 31166980 45 AAGGCAAAAAAAAACCAACCAACCAACCAAACAAACAAAAAAAAA ..::.....x.............................x..... 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 82633613 NA +3471 chr4 + 190214555 145713871 145713870 145713940 70 CTCCTGGGTTCAAATGATTCTCCTGGCTCAGCCTTCCGAGTAGCTGGGATTATAGGCACCTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..........:..x...x.xx...........:.:.........:.:..:.x.::.--:....::.. 59M2D9M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 127516732 62697823 +3259 chr4 + 190214555 145740199 145740198 145740396 198 GGTGAAATGCTTTCCAAATTATAGCTATCTCTCCCTTTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAATAAAA-------AAAAGTGACAATGTGAGGTTTTCAAAACTGCATTTTACAAAAGAACTATGCATT----------------------TACTTTATAATTTCAAATGCTATATTTTCCATTTTTGGTTAATCTGTAATTAATTGT chr4 - 94230402 36351431 36351430 36351642 57878761 57878760 57878972 212 GATGAATCACCTTCAGAATTCTCTTAATTTCTCCTCTTCCTTAAAAAACAAAAAAACAAAAATAAAAAATACAG-TGAAAAATGTAAGTGTACTAATGAAGGCAATGC------------AGTTCATTGTAAGAAAGAAAAATGCCTTAGTAAAACTCATCTGCCTCCAGTACTTTATTACTAAAACCCATACCTTTGTACCCTTTGGTTACTTTGT--TTATTTGT .:....x::.:...x:....x.xx:x..:.....::...:x:......x.......x.....x......x.x..-::......:x..-------..x::x.:.....:------------.x.x....x..x:......xx....x..----------------------........x.:.xx..x:xx..:x...x:xx::........x.:...--...x.... 74M1D12M7I14M12D28M22I47M2D8M 123/183 67.2% 212/94230402 0.0% 44/183 24.0% 109388768 80825787 +3069 chr4 + 190214555 145740239 145740238 145740296 58 GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAATAAAAAAAAGTGACAA chr4 - 94230402 44471029 44471028 44471086 49759317 49759316 49759374 58 GCGCAGAAAAAAAAGAAAAAAAAAAAAAGGACATCTGAGAAATAAAAGAAGGTTACAA ..:x.:........:.............::.x.xx::.:........:..:..x.... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 101269210 88945345 +3030 chr4 + 190214555 145742502 145742501 145742561 60 TTTTCTACACGACAGCATTTTCTTTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 51354282 51354281 51354341 42876062 42876061 42876121 60 TTTTCAATTCTACAGCAGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGAAGA .....x.:x.x......x...:..x..x.....x...:......:.........xx:... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 94388220 NA +3017 chr4 + 190214555 145768874 145768873 145768912 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 76331135 NA +3057 chr4 + 190214555 145795133 145795132 145795165 33 GTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTT chr4 - 94230402 65759188 65759187 65759220 28471183 28471182 28471215 33 GTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 80035945 NA +3272 chr4 + 190214555 145795239 145795238 145795302 64 CCGGGTTCAAGTGATTCTCATGCCTCAGCCTTCCGAGCAGCTGGGATTACAAAGCACCCACCAC chr4 - 94230402 18197142 18197141 18197202 76033201 76033200 76033261 61 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA---CGTGCACCAC .:...........x...x..x.x.........:.:..:......:.:....---.::x...... 51M3D10M 48/61 78.7% 61/94230402 0.0% 3/61 4.9% 127598097 62616458 +3685 chr4 + 190214555 145807764 145807763 145807830 67 CAGGCTGCTTTAAAAAAAAAAAACAAAAAACAAAAACAAAAAAAAAACAAAAAACAAAAAACATTAA chr4 - 94230402 44551257 44551256 44551323 49679080 49679079 49679146 67 CAGACTCCTTTAAAACAAACAAACAAAAAACAACAACTAAAAAACCTTGAAAAACAAAAGGCAATAA ...:..x........x...x.............x...x......xxx::..........::..x... 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% 101256507 88958048 +3175 chr4 + 190214555 145832267 145832266 145832308 42 AAAAACAAACAAACAAACAAAAAACAAAACAAAACCACACAC chr4 - 94230402 57730998 57730997 57731039 36499364 36499363 36499405 42 AAAAACAAACAAACAAACAAAACAAAGCACAAAACCACACAC ......................x.x.:x.............. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 88101269 NA +3165 chr4 + 190214555 145846478 145846477 145846528 51 AAACAAACAAACAAACAAAAAAACACAACAACAACAACAAAAAACAACCAT chr4 - 94230402 4362019 4362018 4362069 89868334 89868333 89868384 51 AAACAAACAAACAAAAAAAGAACCAAAACAACAACAACAAAACCCTTCCAT ...............x...:..x..x................xx.xx.... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 141484459 48730096 +3003 chr4 + 190214555 145846483 145846482 145846526 44 AACAAACAAACAAAAAAACACAACAACAACAACAAAAAACAACC chr4 - 94230402 39627354 39627353 39627397 54603006 54603005 54603049 44 AATAAACAAACATAAAAATACAACAACAACAACAACAATCATCC ..:.........x.....:................x..x..x.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 106219129 83995426 +3019 chr4 + 190214555 145846818 145846817 145846864 47 AACAAACAAACAAACAAAAACACAACAACAACAACAAAAAACAACCA chr4 - 94230402 50013544 50013543 50013590 44216813 44216812 44216859 47 AACAAGTACAGAAAGAAAGAAACAACAACAACAACAAAAAACAACTA .....::.x.x...x...:.x........................:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 95833274 NA +3311 chr4 + 190214555 145846821 145846820 145846860 40 AAACAAACAAACAAAAACACAACAACAACAACAAAAAACA chr4 - 94230402 28228777 28228776 28228816 66001587 66001586 66001626 40 AAACAAACAAACAAAAACTCAACAACAACAACAACAAACA ..................x...............x..... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 117618044 72596511 +3736 chr4 + 190214555 145878586 145878585 145878765 180 ACAGGACAGGACAGGACAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGGAGAGAGAGA--AAGGAAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGAGAGA-GAGGAAGGGAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGCGGAAGGAAGGAAGGA chr4 - 94230402 60992637 60992636 60992816 33237587 33237586 33237766 180 ACAGACCAAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAA--AAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGGG-GAAAGGAGAGACGGA ....:x..:..x..:xx.:.x.:::x...:.x........:....:...x:..--....x:.......x:.::x:..:::.x...--..:..x::.:.:..:.:xxx:.x.x.x.::x..x......-...::..:x....xx:..:.xx...:x...x...:x...-.:.....::..x... 53M2D30M2I40M1I39M1D15M 108/177 61.0% 180/94230402 0.0% 6/177 3.4% 84885949 NA +3126 chr4 + 190214555 145878602 145878601 145878711 110 CAGGAAAGGAAAGGAAAGGAAAGG-AAAGGAAAGGAAAGGAAAGGA---AAGGAAAGGAAAGGGAGAGAGAGAAAGGAAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGAGAGAG chr4 - 94230402 86597945 86597944 86598058 7632345 7632344 7632458 114 CAGAAAAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATGAAAGGGATATAAAATGGCACAGGG ...:...:......x.:.:.....-.:.:.:..::....x.:..x.---..x:.......x.:..x..x::.:.x.:.:......:x:x..:...:.x:x.::.x..x.x..:. 24M1I21M3I65M 70/110 63.6% 114/94230402 0.0% 4/110 3.6% 59280657 NA +3103 chr4 + 190214555 145878613 145878612 145878706 94 AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGGAGAGAGAGAAAGGAAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGA chr4 - 94230402 10903375 10903374 10903468 83326935 83326934 83327028 94 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGA ..:..:.::..:....:..x..:...:x:x.:...x:..:xx...x.::.....:.......::.xx..::...x.:..:x:.x..:x..:... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 134975238 55239317 +3658 chr4 + 190214555 145878623 145878622 145878774 152 AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGGAGAGAGAGAAAGGAAGGAAGGGAGAGAGAGGAAGGGAGGAAGGGAGAGAGAGGAAG-----------------GGAGGAAGGGAGAGAGAGGA----------AGGGAGGAAGGGCGGAAGGAAGGAAGGAAGGAAAGAA chr4 - 94230402 60992644 60992643 60992821 33237582 33237581 33237759 178 AAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGG-GGAAAGGAGAGACGGATAAAA .:..:..:x..:.x.:::x...:.x........:......::x::.:..:x.......:x:..:x...:...x:..xx..:.:x:.::...:..:-----------------.:::..x.:......x....----------..:x...x....:..-:.:.....::..x...x.:.. 95M17I20M10I15M1D21M 95/151 62.9% 178/94230402 0.0% 28/151 18.5% 84885979 NA +3006 chr4 + 190214555 145938540 145938539 145938637 98 TTCTCCGGTGTGTGCAATGGGTTGAAGCTTGTTTCCTGGAGCCAGAAGAGGGGTTTTCTTCTTTTCTTTCCTTTCTTTTTTCCTTTTTTTTTTTTTTT chr4 - 94230402 62915025 62915024 62915118 31315285 31315284 31315378 94 TTTTTCTGTGTTTATAAA----CGAAGCTTTCTTCATAAACCATGGAAAGATGCTTTTGCTGTTTTCTTGCTTTTTCCTTTCCTTATTTTTTTTTTTT ..:.:.x....x.::..x----:.......x:...x.::.x.xx.:.:..:x.:...:x::x...::..x....:.::.......x............ 18M4D76M 61/94 64.9% 94/94230402 0.0% 4/94 4.3% 83023515 NA +3127 chr4 + 190214555 145938570 145938569 145938655 86 GTTTCCTGGAGCCAGAAGAGGGGTTTTCTTCTTTTCTTTCCTTTCTTTTTTCCTTTTTTTTTTTTTTTTAAATTTTTGGTCGTGCA chr4 - 94230402 63646671 63646670 63646756 30583647 30583646 30583732 86 GCTTCCACAGGCAGGAAGAGGATTTAGTCTCTGTGCCTTTTTCTTCTTCTTTTTTATTTTTTTCCTTTTAAATTTTTGAAAGAGCA .:....xx::..x:.......:x..xx::...x.x.:..::.:.::..:..::..x.......::.............:xx.x... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 82291899 NA +3574 chr4 + 190214555 145957686 145957685 145957785 100 CTTCCTTCCTTCCTTCTTT-------CCTTCCTTCCTTCCCCTCTCTTTCTCTTTCT-------TTCTCTTTC-----------TCTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTTCTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:.........x.x...:-------:x.:...:.:..:..:.:.:.......:x.:-------...:x....-----------...x.........:...........x.xx..::........ 19M7I31M7I9M11I41M 75/100 75.0% 125/94230402 0.0% 25/100 25.0% 102875786 87338769 +3864 chr4 + 190214555 145957690 145957689 145957901 212 CTTCCTTCCTTCTTTCCT-----TCCTTCCTTCCCCTCTCTTTCTCTTTCTTTCTCTTTCTCTCTTTCTTTCT--TTCTCTCTCTCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTGT-----CTCTCTTTCTCTCCCTCTGGCTCTCTT----------------------------TCTCTCCCTGTC------------TTCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 43081900 43081899 43082161 51148242 51148241 51148503 262 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAACGCCATTTGCCACAGCCCCGTGCTCTCCCAGCGGACGGCGGGCGCCGGATGAGCCCGTGGGCCCCCGCCGGGAGAAGCCATCTCATTCCTCCATCTCGTCCACCCTCCTCTCCTCCCTT--TTGTTTCCCTCCT ..:.........x.x.:.-----.x..x:.:::..:.:..:..:.:.....:..x.::..:x.x..:.x..::--....xxx::...x.:...:.:...:.........x.xx..::..........-----.:x.:.x:.x.xx..:.xx......::----------------------------.xxx:...:.:.------------:..x.:.....x..:.x...x:...:.::....:....--..x:....:.... 18M5I50M2I52M5I27M28I12M12I38M2D13M 135/210 64.3% 262/94230402 0.0% 54/210 25.7% 102875790 87338765 +4372 chr4 + 190214555 145957694 145957693 145957923 230 CTTCCTTCTTTCCTTCCT-----TCCTTCCCCTCTCTTTCTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTGTCTCT-----CTTTCTCTCCCTCTGGCTCTCTTTCTCTC------------------------CCTGTCTTCCTCCCTC------CCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCTTTCTTTCTTTTCTTCT chr4 - 94230402 43081900 43081899 43082169 51148234 51148233 51148503 270 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAACGCCATTTGCCACAGCCCCGTGCTCTCCCAGCGGACGGCGGGCGCCGGATGAGCCCGTGGGCCCCCGCCGGGAGAAGCCATCTCATTCCTCCATCTCGTCCACCCTCCTCTCCTCCCTTTTGTTTCCCTCCTGTGCATCT ..:.....:...x.x.:.-----.x..x:.....::....::...:.......:x.:...:x.x..:.x..::xx:...xxx::...x.....................x.xx...::.x.:...-----.x::x.:.x..x.x.x.:.x:x:....:.------------------------..:..xxx..:..x:.------xx:.x::..x.....:.x.::.x...x:...:.::....:....:.x:..:.:.:..x.x.x... 18M5I102M5I29M24I16M6I65M 142/230 61.7% 270/94230402 0.0% 40/230 17.4% 102875794 87338761 +3216 chr4 + 190214555 145957697 145957696 145957758 62 CCTTCTTTCCTTCCTTCCTTCCCCTCTCTTTCTCTTTCTTTCTCTTTCTCTCTTTCTTTCTT chr4 - 94230402 57389177 57389176 57389238 36841165 36841164 36841226 62 CCTTCCTTCCAACCTTGAGTTCCCTCCCTACCTCTGTCTTTCTCTTCCTAGCTTCCTTTCTT .....:....xx....xxx.:.....:..x:....x..........:..xx...:....... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 88568520 NA +3255 chr4 + 190214555 145957718 145957717 145957827 110 CCCTCTCTTTCTCTTTC---------TTTCTCTTTCTCTCTTTCTTTCTTTCTCTCTCTCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTGTCTCTCTTTCTCTCCCTCT chr4 - 94230402 43081902 43081901 43082020 51148383 51148382 51148501 119 CCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCT ....::...:x.x:...---------.::...:..:..::...:.....:..x.:...:x.x.::.x:..:xx....xxx::...x.:.......:...x.......x.xx..:.:... 17M9I93M 70/110 63.6% 119/94230402 0.0% 9/110 8.2% 102875816 87338739 +3643 chr4 + 190214555 145957742 145957741 145957858 117 TTCTCTCTTTCTTTCTTT------CTCTCTCTCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTGTCTCTCTTTCTCTCCCTCTGGCTCTCTTTCTCTCCCTGTCTTCCTCCCTC chr4 - 94230402 43081901 43081900 43082023 51148380 51148379 51148502 123 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTC .:.::..:...x.x...:------..x..:...:..:..::...:........x.:...:x.x..:.x..::.x:...xxx::...x::...xx......:......:x.:x....:..::.. 18M6I99M 74/117 63.2% 123/94230402 0.0% 6/117 5.1% 102875841 87338714 +3194 chr4 + 190214555 145958482 145958481 145958552 71 CTGCAACCCCCGCCTCCCAGGTTCAAGTGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGG-ATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:...xx:x..:.::..........x.:.x.xx.x........::...........-.:....x.... 60M1I11M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% 127761356 62453199 +3177 chr4 + 190214555 145959399 145959398 145959458 60 TGTTATAATACACAGGGTTTTTGTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGG chr4 - 94230402 51655312 51655311 51655369 42575034 42575033 42575091 58 TATGAGAAAATAGAGGGGCTTT--TTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGG .:.x.x..x.:.x....x:...--..............x..x.................. 22M2D36M 48/58 82.8% 58/94230402 0.0% 2/58 3.4% 94304087 NA +3454 chr4 + 190214555 145959413 145959412 145959484 72 GGGTTTTTGTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGGTGGATGGGAGGTATTTTGTTTGTTT chr4 - 94230402 51655327 51655326 51655382 42575021 42575020 42575076 56 GGGCTTTTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT----------------TTTTTTTTGTTT ...:....x..x............x...................----------------....x....... 44M16D12M 51/56 91.1% 56/94230402 0.0% 16/56 28.6% 94304086 NA +3260 chr4 + 190214555 145959416 145959415 145959456 41 TTTTTGTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51318579 51318578 51318619 42911784 42911783 42911824 41 TTTTGTTTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ....xx...............x................... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 94640837 NA +3397 chr4 + 190214555 145959416 145959415 145959453 38 TTTTTGTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51655333 51655332 51655370 42575033 42575032 42575070 38 TTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ........x............................. 38M 37/38 97.4% 38/94230402 0.0% 0/38 0.0% 94304083 NA +3001 chr4 + 190214555 145959418 145959417 145959453 36 TTTGTTTTTGTTGTTGTTGGTGGTGGTGGTGGTGGT chr4 - 94230402 51318584 51318583 51318619 42911784 42911783 42911819 36 TTTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT ...x..x............................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 94640834 NA +3000 chr4 + 190214555 145975244 145975243 145975289 46 ATCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAA chr4 - 94230402 30013188 30013187 30013233 64217170 64217169 64217215 46 ATCTTAAAAAAAAAAAAAAGTTTGAAGTAAAAAAGAAAAAGAAAAA ....:..............:xxx:...x.................. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 115962056 74252499 +3063 chr4 + 190214555 145978274 145978273 145978326 53 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAATTAGGG chr4 - 94230402 79828831 79828830 79828883 14401520 14401519 14401572 53 TCTCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAAGTGGATTATGG ....xx..........:.....:......::.::........:x.:....x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 66149443 NA +3102 chr4 + 190214555 145991663 145991662 145991713 51 CGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAATAGAAAGCAGAA chr4 - 94230402 6560724 6560723 6560774 87669629 87669628 87669679 51 CGCAGAAAAAGGAAAGAAAAAAAAATAGAGGACAAGAAACAGAAACCAGAA ....:.....::...:.........x.:....x.::...:.....x..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 139430939 50783616 +3083 chr4 + 190214555 145991666 145991665 145991725 60 AAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAATAGAAAGCAGAAAGCAGA-AGCTCA chr4 - 94230402 13722720 13722719 13722780 80507623 80507622 80507683 61 AAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAATTAAATAACTCA ........:.x..............:.:.x..x...x..:...:.....x:.:.-.:.... 54M1I6M 47/60 78.3% 61/94230402 0.0% 1/60 1.7% 132268946 57945609 +3050 chr4 + 190214555 146008257 146008256 146008331 75 TCTTCCCTCCCTCCCTCTCTCTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTT chr4 - 94230402 2110783 2110782 2110857 92119546 92119545 92119620 75 TTTTCCCTCCCTGGCCCGTCCATGGCTTTCTCCTCAATGCCTTTCTTTATTTCTTTTTTTTTTTTTTTTCACTTT .:..........xx.:.x::.x.xx:.....::..xx.x.:.......x.......:.:...:...:...x:... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 143897474 46317081 +3209 chr4 + 190214555 146008291 146008290 146008365 75 CTTTTCTTTTCTTTCTTTCTTTCTCTTTCTTTCTTCTTTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCT chr4 - 94230402 22629303 22629302 22629377 71601026 71601025 71601100 75 CTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .........::........x.x:..x.x:.:x:.:::....x..:x..:x...:..x:.........::...... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 123378988 66835567 +3159 chr4 + 190214555 146008565 146008564 146008626 62 TTTCCCTTTCTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCTTCTTTTGTTGGAGTCTC chr4 - 94230402 43496254 43496253 43496315 50734088 50734087 50734149 62 TTACACATTCTGCTTTCTACCACCCTCCTTTCCCTCCTTTCTTCTTCTTCTGCTGTTGTTTC ..x.x.x....x...:..x..x:...:......:.....:.........:..:..xx..:.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 102512311 87702244 +3206 chr4 + 190214555 146021216 146021215 146021296 81 ACATCTTTATTTCCCTCATGTTTGAAGGGTTTTTTTTTGTTGTTGTTTTATTGTTTTTTTGTTTTTTGTTTTTTTGTTTTT chr4 - 94230402 46778085 46778084 46778159 47452244 47452243 47452318 75 ACCTCTTTCTCTGTTCTATGGAAGAGAGGTTT------GTTGTGGTTTTATTGGTTTTTTTTTTGTTGTTATTTTGTTTTT ..x.....x.:.x::::...xxx..::.....------.....x.........x......x...x.....x.......... 32M6D43M 57/75 76.0% 75/94230402 0.0% 6/75 8.0% 99243131 90971424 +3261 chr4 + 190214555 146021238 146021237 146021287 50 TGAAGGGTTTTTTTTTGTTGTTGTTTTATTGTTTTTTTGTTTTTTGTTTT chr4 - 94230402 75733738 75733737 75733787 18496616 18496615 18496665 50 TGGTGGGTTTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTTT ..:x.....................x.x.x.........x.....x.... 50M 43/50 86.0% 50/94230402 0.0% 0/50 0.0% 70287500 NA +3051 chr4 + 190214555 146031922 146031921 146031978 57 TATATACACACACACACACACACTCACACACATATATATATGTGTATGTATATTTTT chr4 - 94230402 87372741 87372740 87372797 6857606 6857605 6857662 57 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT ...x.x..x...........x..x......:x....::.....:::.:.......:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 58659181 NA +3030 chr4 + 190214555 146031924 146031923 146031978 55 TATACACACACACACACACACTCACACACATATATATATGTGTATGTATATTTTT chr4 - 94230402 87372741 87372740 87372795 6857608 6857607 6857662 55 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT ...x:x..x...........xx.........x....::.:....:......x... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 58659183 NA +4260 chr4 + 190214555 146061221 146061220 146061420 200 CTACCTATATTTCTCTTTCCTTTTCTCTTTCCTTCCTTCCTCCTTCTTCCTTCCTTTCTTGGCTTTTCTTTTCTTCTTTCTCTTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTT-CTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTT--TCTTTCTTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 28459077 28459076 28459277 65771126 65771125 65771326 201 CTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCC--CTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCT-TTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTC ..:x..x....x:.x:..:..x.x...:..x...x:.::....--......:.:xx:x.:x.:...:x:.:.xx.::....-..:....xx::.....x::.....:......x:.......:...-...xx.....:xxxx.x......x..xx..:.x.:.--.x.....x.....x...-.::.x..:..:.x::.:.... 43M2D36M1D44M1I36M2I17M1I21M 126/197 64.0% 201/94230402 0.0% 7/197 3.6% 117602144 72612411 +3846 chr4 + 190214555 146061274 146061273 146061391 118 CTTTCTTGGCTTTTCTTTTCTTCTTTCTCTTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTTT chr4 - 94230402 52825834 52825833 52825951 41404452 41404451 41404569 118 CTTTATAGTCTTTTCAATTTTTTTTTCTCCTTGATACAAATTCCTTTTATGCTTATCTCCTCTTACCTCAGTGCTTTTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTT ....x.x.x......xx..:..:......:..xx:x.xxx..:x...:x.x...x::.::...:x.:.:xx.x..:.....x........:..x..:....:x...:.......x... 118M 77/118 65.3% 118/94230402 0.0% 0/118 0.0% 93235440 NA +3048 chr4 + 190214555 146061303 146061302 146061390 88 TTTCTCTCTCCTTTGTTTCTTTCTTTCTTTTTCTCTCTTTCTTTCTCTTTCTTCCTTTCTTTTTCTTTCTTTCCTTTCTTTCTTTCTT chr4 - 94230402 34820620 34820619 34820707 59409696 59409695 59409783 88 TTTCACTTTCCTCATTTTTTGCCTATATTGTTCTTTGACCCTCACTGTTCTCTGCTTCTTTCATCTGTATTTCCTTTGTTTCTTTCTT ....x..:....:xx...:.x:..x.x..x....:.xx::..:x..x..:::.x...::..:x...x.x........x.......... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 111240683 78973872 +3212 chr4 + 190214555 146067684 146067683 146067791 108 CTTCTCACCCTTCTCTCCTTCCT-TCTC-ACAGTCTAAAGTGTTC-------------------CCTGCCTGCTGTTGCTCCTTTGGTTTCCTCCCTCCCTCCCTTCTTTCCTTCCTTCCTTCCTTCCC chr4 - 94230402 62000980 62000979 62001108 32229295 32229294 32229423 129 CCTCACATTTTTCTGCCCTGCCTCTCTCTGCAGCCTACACTGTTCTGCAGTGTGATTACTTTTTCCTCTATGCATTTGCCTCTTTGGTCTTACCCCTAACACTGTTCTTTCTCTCTTTCCCTCCTTCCC .:..x..:::....x:...x...-....-:...:...x.x.....-------------------...x:x...xx....::.......:.:x:....xx.x.:x.......::..:....:........ 23M1I4M1I16M19I65M 76/108 70.4% 129/94230402 0.0% 21/108 19.4% 84066704 NA +4193 chr4 + 190214555 146067767 146067766 146067968 202 TTCTTTCCTTCCTTCCTTCCTTCCCTCC---CTCCTTTCCTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCT--CTTTCCCTCCCTCCT-TCCCTCTCTCTCTTT-CTCTCTTTCTTTCTTTCTTTC chr4 - 94230402 28459070 28459069 28459277 65771126 65771125 65771333 208 TTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGT-TTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTC ..:...x..xx...:x..x:.x.::..:---......x.:.x.:..:......:..::::x:x.:.x.-....x:.:.xx.....::..:....xx:....x.x::.....:......x........:....:.:xx::....xxxx:x.....--..xx....x...xx.-.::..x...:.x...-.:..x..:..:.x::.:.... 28M3I37M1D85M2I15M1I15M1I21M 126/201 62.7% 208/94230402 0.0% 8/201 4.0% 117608697 72605858 +5772 chr4 + 190214555 146067795 146067794 146068003 209 CTCCTTTCCTTTCCTTTCCCTTTCTTTCGTTCTTTCTCTTTCTT--------TTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTT-----------------CTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTC---TCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 88451619 88451618 88451855 5778548 5778547 5778784 237 CCTTTTTCCTTTCCCTTGTTTTTTTGATATTCATTAGCTTTTCTGTAATAGGTGTGCTTACTTCTCTCTCATTTCTGTCTTTCTCCATCCCTTCTCTTCTATTCTTATTTATTTATTTTTCCTTCAACCAGCATATGACCACCATTCTTTTTCCACATTTCATCTCTTCTCATAAATATTTCTTTCATCCTTTTTCATCCtttttttttttttttttttttttttttttcttACTCT .:::..........:..x::...:.xx::...x..xx....::.--------.x.x:..x:....:....x..::.x.......::x.::...:.:....x..::.x.:.x...x...:..:..-----------------.:x....:.....x:x::..x.::.:....x:---.x.....:..x.:....:.:x:::.:...:...:...:...:...:...:......x..:. 44M8I72M17I32M3I61M 133/209 63.6% 237/94230402 0.0% 28/209 13.4% 57616176 NA +3791 chr4 + 190214555 146067809 146067808 146067963 155 TTTCCCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTT---CTTTCTTTCTTTCTTT---TTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTCTTTCTTTCTTT chr4 - 94230402 45185594 45185593 45185751 49044652 49044651 49044809 158 TTTCCCTCTTCCTAGTC--TCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTT-TCTCTTTAATCTTTT .......:.:::.x..:--.:xx:.....x:...x..........:::..:x....---.:..::..........---.:...:......:x...xx.x:.....x:.x:..x:::..::xx:.x.:...xx:....:x:.....-.......xx.::... 17M2D37M3I16M3I67M1D15M 98/152 64.5% 158/94230402 0.0% 9/152 5.9% 100882215 89332340 +3451 chr4 + 190214555 146067813 146067812 146067890 78 CCTTTCTTTCGTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTT chr4 - 94230402 44322019 44322018 44322096 49908307 49908306 49908384 78 CCTTTCCTCCTAATTTAACCTTCATTTTACCTCATTTATTTATCCTTTTCTTCTTTATTTCTTTCTTTTTTCCCCTTT ......:.:.xxx:..xx:...:x....x.:.:x...x...x..:..:.:......x..............:.:.... 78M 55/78 70.5% 78/94230402 0.0% 0/78 0.0% 101745794 88468761 +3440 chr4 + 190214555 146067844 146067843 146067934 91 TTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCT--TTTCTCTTTCCCTCCCTCCTTC chr4 - 94230402 18988810 18988809 18988902 75241501 75241500 75241593 93 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC ...x..x.::..:x.x:...x......:.xx.:..x.....:........:............x.:.x.--..:..x.....:x:.:x..x.. 69M2I22M 64/91 70.3% 93/94230402 0.0% 2/91 2.2% 127079034 63135521 +3126 chr4 + 190214555 146067855 146067854 146067932 78 TCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCT chr4 - 94230402 8141243 8141242 8141320 86089083 86089082 86089160 78 TCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ..:x:....x..x...:........x..:x:..:::..x.......:...:.:..:.:.x:x::...:..:::..... 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 137926612 52287943 +3044 chr4 + 190214555 146067860 146067859 146067926 67 CTTTTCTTTCTTTCTTTCTTTTTT----TCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTC chr4 - 94230402 179499 179498 179569 94050834 94050833 94050904 71 CTTTTCTTCTTCTCTCTAACCTTTGCATCCACTTTTTGTCTTTTCCTCCCTCCTTCTTTTCCCTCTTCCTC ........::.:...:.xx::...----:.x....:.x......:..::...:........:..:.:.... 24M4I43M 48/67 71.6% 71/94230402 0.0% 4/67 6.0% 145888361 44326194 +3167 chr4 + 190214555 146067874 146067873 146067952 79 TTTCTTTTTTTCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCTC chr4 - 94230402 83048901 83048900 83048979 11181424 11181423 11181502 79 TTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTC ..x:.....:.:...x.....::........:...x:x...:.:x::..:x...x.x.x..........:x.::.::.. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 63018973 NA +3152 chr4 + 190214555 146067884 146067883 146067931 48 TCTCTTTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCC chr4 - 94230402 20596771 20596770 20596818 73633585 73633584 73633632 48 TCTTTTTTTTTTTTTTTTTTTCCCTTCCTTTTCCCCCTCCCCCCCCCC ...:...:...:.....:....:...:......:.::....:...:.. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 125471113 64743442 +3067 chr4 + 190214555 146067889 146067888 146067951 63 TTCTTTCTTTTTCTTTCTCTTTCTTTTCTCTTTCCCTCCCTCCTTCCCTCTCTCTCTTTCTCT chr4 - 94230402 54635350 54635349 54635412 39594991 39594990 39595053 63 TTTTTTCTTTTTCTTTTTTTTTCTCACCCCCTCCCCTCTCCCCTTGAATTTCTTTTCTCCTTT ..:.............:.:.....:x:.:.:.:.....:.:....xxx.:...:.::.:..:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 91432539 NA +3319 chr4 + 190214555 146148568 146148567 146148628 61 AGTAGAGTAGCAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGTGGGGCAGGCAGA chr4 - 94230402 81167080 81167079 81167140 13063263 13063262 13063323 61 AGGAGAGGAACAGGAAAAGAAAAAAAAAAAAGAAAGAGGAACAGGGAGCAGAGCAGACCGA ..x....x.:....x...:............:...:.::..x.:....::.:....:.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 64981488 NA +3190 chr4 + 190214555 146155747 146155746 146155807 61 ATGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAACCTCTCAGGAGGAAACTGAA chr4 - 94230402 49410724 49410723 49410784 44819619 44819618 44819679 61 ATGGGGAAAAAAGAAAATAGGAAAGAAAAAAAAAGGAAAACCCTCCCAGGAACAaaaagaa ...:.x......:....x.::...:.........:..x..x....:.....:x...xx... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 96745023 93469532 +4021 chr4 + 190214555 146172026 146172025 146172170 145 TCTGTTTCCTTATTTTCTTTTTTCCCCTCCCTCCC-----TCTTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTT chr4 - 94230402 9693686 9693685 9693835 84536568 84536567 84536717 150 TTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .:..::.:....x.:....::.:..xx.....:.:-----.......:..xxx.x:...xx:.x..xx:...x:.x.x.xx:.....:..:..::.:.::....:..::.:x...:..x.:...x..x...:........::::.:.:.. 35M5I110M 88/145 60.7% 150/94230402 0.0% 5/145 3.4% 136478340 53736215 +3250 chr4 + 190214555 146172063 146172062 146172147 85 TTTCTTTTCCTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570557 41570556 41570641 52659762 52659761 52659846 85 TTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT ...x..x.......x::.....:...............xx..:x:x.xx:::x...:::....:.xxx............xx... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 104601506 85613049 +3819 chr4 + 190214555 146172080 146172079 146172212 133 TTTTTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTT------CTT----------TCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTCCTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTT chr4 - 94230402 9693685 9693684 9693835 84536568 84536567 84536718 151 TTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ....x.:.....xx.:....:..::.-x.:.:....x.:.x.......:.------...----------.:..x..x:x.xx......:..:..::.:.:....:......:-...:..x.:...x..x:...:..:.....:.:.:.:.. 26M1I23M6I3M10I43M1I38M 91/133 68.4% 151/94230402 0.0% 18/133 13.5% 136478395 53736160 +3469 chr4 + 190214555 146172150 146172149 146172241 92 TTCTTTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCTTTCTTTCTTCATTTA chr4 - 94230402 19053884 19053883 19053973 75176430 75176429 75176519 90 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTT--TTTTTTTCTCTGCTTCATACTCTGTTCA ...:...:..x.:...:x..xx......:x..:..:.:......xx.....x.:.:..:...--...:.......x:...x.x..:::..:. 62M2D28M 62/90 68.9% 90/94230402 0.0% 2/90 2.2% 127118266 63096289 +3112 chr4 + 190214555 146172154 146172153 146172226 73 TTCTTTCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCTTCTTTCTTTCTTTCTCTCT chr4 - 94230402 19053884 19053883 19053956 75176447 75176446 75176519 73 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCT ...:...:.:x.:.:.:x..xx......:x..:..:.:......xx..::.x....:.:....:...:..... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 127118270 63096285 +3008 chr4 + 190214555 146326914 146326913 146326984 71 ACAGACACACACACACACACACACACACACACACACACACACACACACACACACAGAAAAAGAGAGAGAGA chr4 - 94230402 53842132 53842131 53842202 40388201 40388200 40388271 71 ACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACAAAACTAAAGAGAGAAA ....x:.....:x:::.::....:.::..:...:::.x.:.x.....:.......:..xx.:.......:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 92484782 NA +3290 chr4 + 190214555 146326941 146326940 146326994 54 CACACACACACACACACACACACACACAGAAAAAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.......................:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 78674857 NA +3396 chr4 + 190214555 146326945 146326944 146326996 52 CACACACACACACACACACACACAGAAAAAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652135 26578268 26578267 26578319 52 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA .....::...x...:...:..xx.:.....:.:................... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 78674861 NA +3196 chr4 + 190214555 146340483 146340482 146340561 79 ATATATA---TATACACATATACATATATATGTGTGTGTGTGTATATATATATATGGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 65737671 65737670 65737752 28492651 28492650 28492732 82 ATATATGCAGTATGCACGTATGCATCCATAGGCAGGTGTTTGTGTGTATGCCAATGTATAGAGGGAGAGAGAGCAACAGAGA ......:---...:...:...:...x:...x.::x....x...:.:...::xx...x.x....:.........x:.x..... 7M3I72M 56/79 70.9% 82/94230402 0.0% 3/79 3.8% 80602812 NA +3591 chr4 + 190214555 146340487 146340486 146340557 71 ATATATACACATATACATATATATGTGTGTGTGTGTATATATATATATGGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....x.:::..x..x.x:.:.::........:.::.:.......:.::............x.....x... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 112941684 77272871 +4094 chr4 + 190214555 146340491 146340490 146340626 136 ATACACATATACATATATATGTGTGTGTGTGTATATATATATATGGAGAGAGAGAGAGAGAGAGAGAGAGA-GTG-ATTAGACTTTTAGACTTTTAACCTGGACATTTCTATGGTGAATTA-TTAAAAACAGTACTGAG chr4 - 94230402 33398803 33398802 33398937 60831466 60831465 60831600 135 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaactgttgaatcatagcctgaac----ctctgattgaccacctgaggaaagcactgag ...:.x..:..:x..x.x:....:...........:.:......:x.x.............x.....x...-:..-..x:..x:.x.x..x.:x..:....:..----..x..:.x:.::.-:.:.::.x..:...... 71M1I3M1I28M4D13M1I17M 92/132 69.7% 135/94230402 0.0% 7/132 5.3% 112941688 77272867 +3075 chr4 + 190214555 146374561 146374560 146374646 86 CCTAGGCAACAGAGTGAGACTGTCTCAAAAAAAATATATACATATATATATATACACATACACACACACACACACACACACACACA chr4 - 94230402 8395780 8395779 8395862 85834541 85834540 85834623 83 CCCAGGCCAT---GTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:....x.:---...x.xx...x.xx.x...x..:...x:.:....:...::x:....xx.:.................x..... 10M3D73M 59/83 71.1% 83/94230402 0.0% 3/83 3.6% 137978781 52235774 +3081 chr4 + 190214555 146374588 146374587 146374644 57 AAAAAAATATATACATATATATATATACACATACACACACACACACACACACACACA chr4 - 94230402 8395806 8395805 8395862 85834541 85834540 85834597 57 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.x:...x.......:...::x....:xx.:.................x..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 137978782 52235773 +3012 chr4 + 190214555 146374592 146374591 146374648 57 AAATATATACATATATATATATACACATACACACACACACACACACACACACACACA chr4 - 94230402 8395806 8395805 8395862 85834541 85834540 85834597 57 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:..:..:x..:....:...:.x:.:.:xx.:.................x..... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 137978786 52235769 +3434 chr4 + 190214555 146374594 146374593 146374668 75 ATATATACATATATATATATACACATACACACACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395796 8395795 8395870 85834533 85834532 85834607 75 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:....x.:..:...x:.....:::.::.x:...:xx.:.................x.....x..:x... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 137978798 52235757 +3030 chr4 + 190214555 146374595 146374594 146374666 72 TATATACATATATATATATACACATACACACACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395799 8395798 8395870 85834533 85834532 85834604 72 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.::.:.x.:..:...x....:..::.::.x:...:xx.:.................x.....x.::x... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 137978796 52235759 +3120 chr4 + 190214555 146374596 146374595 146374654 59 ATATACATATATATATATACACATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x....:...x..:...:::..:.x:...:xx.:.................x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 137978792 52235763 +3334 chr4 + 190214555 146393266 146393265 146393390 125 TTCTTTACATGCATTTTTAAAATTTAG--CTTTTATAACAACCCCATGAGCTT----ATTAGCATTATCTCCATTTACAGATGTGAAAATGAGTCCTAGAAAGATTAAGAAATATGTACAAGATCACAGAG chr4 - 94230402 18690880 18690879 18691008 75539395 75539394 75539523 129 TTCTAGACATGTAGTTTTAAAAAAGAGGACACACATGACAACTT--TTATCTTTACAGACAGTATTAGCCTATTTTACATATGGGGAATGGAGGCATAGAAAGATTAAGAGATTTGCTAAAGATTACAGAG ....xx.....:.x........xxx..--.x:x:..:.....::--.x.x...----:x:..:....x.::xx......x...x.:..xx...x.x..............:..x..:xx.....:...... 27M2I15M2D7M4I74M 85/123 69.1% 129/94230402 0.0% 8/123 6.5% 127702386 62512169 +3334 chr4 + 190214555 146393266 146393265 146393390 125 TTCTTTACATGCATTTTTAAAATTTAG--CTTTTATAACAACCCCATGAGCTT----ATTAGCATTATCTCCATTTACAGATGTGAAAATGAGTCCTAGAAAGATTAAGAAATATGTACAAGATCACAGAG chr4 - 94230402 18687817 18687816 18687945 75542458 75542457 75542586 129 TTCTAGACATGTAGTTTTAAAAAAGAGGACACACATGACAACTT--TTATCTTTACAGACAGTATTAGCCTATTTTACATATGGGGAATGGAGGCATAGAAAGATTAAGAGATTTGCTAAAGATTACAGAG ....xx.....:.x........xxx..--.x:x:..:.....::--.x.x...----:x:..:....x.::xx......x...x.:..xx...x.x..............:..x..:xx.....:...... 27M2I15M2D7M4I74M 85/123 69.1% 129/94230402 0.0% 8/123 6.5% 127705449 62509106 +3046 chr4 + 190214555 146436021 146436020 146436081 61 TTAAATGGTAATGAAATCATTGCTTTAAAAAAAATCCATCATTATTAAAATAAAAAAAAAA chr4 - 94230402 57375355 57375354 57375415 36854988 36854987 36855048 61 TTAACTGGAAATCAAATCTCTATCTTAAAAATATTACAACATTATTGAAACAGAAAAAAAA ....x...x...x.....x:.:::.......x.x.x..x.......:...:.:........ 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 89060666 NA +3026 chr4 + 190214555 146453012 146453011 146453060 49 AGATATATACAATGTGTGTGTGTGTATATATATATATATAAATATACAA chr4 - 94230402 85036770 85036769 85036818 9193585 9193584 9193633 49 AGGTTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTAA ..:.x....:x..:..........................::.x.::.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 61416242 NA +3116 chr4 + 190214555 146467519 146467518 146467591 73 ACTCCTTAGCATGTTTTTTTGCCCTTTTCTTTTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 50117624 50117623 50117696 44112707 44112706 44112779 73 ACTCCTGGAAATGTCTTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAGCAGA ......x::x....:..::x:xx..x.x:x..x....:.......:..................x.x::.... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 96349895 93864660 +3655 chr4 + 190214555 146467524 146467523 146467592 69 TTAGCATGTTTTTTTGCCCTTTTCTTTTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTTTTGAGACAGAG chr4 - 94230402 49339953 49339952 49340021 44890382 44890381 44890450 69 TTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAG .......x.:......x:x.x..::.::....:.......:.............::..x..::.x.... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 97127571 93086984 +3501 chr4 + 190214555 146516417 146516416 146516501 85 GTGTGTGTGTGTGTATACACACACACTTTTG-ACA-----------CATATATGTATGTGTATATGTATATGTGTATATATATACACATATACATAT chr4 - 94230402 87985345 87985344 87985441 6244962 6244961 6245058 97 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT ........:.:.:...x:.:......::..:-...-----------..x:..x.x.:........:...x...:...........:::.x.....:. 31M1I3M11I51M 63/85 74.1% 97/94230402 0.0% 12/85 14.1% 58531072 NA +3693 chr4 + 190214555 146530114 146530113 146530563 450 CTGCCCTGCTAGTACAAGAAGCAAATAAGCTGACTCTTGGGCAAAACCTGAACATAAAGGCCCCCCATGCTGTGGTGACTTTAATGAATATTAAAGGACATCATTGGCTAACGAATGCTAGACTTACCAAGTACCAAAGTTTGCTCTGTGAAAATCCCTGTATAACCATTGAAGTTTGTAACACCCGCCACCTTG---------CTCCCGGTATCAGAGAGCTGTGTTGAGCATGATTGTGTAGAAGTGTTAGACTCAGTTTACTCTAGCAGACCTGACCTCTGGGACCAGCCTTGGGTATCAATAGA-------CAGGGAACTATATGTGGATGGGAGCAGCTTCATCAACCCACAAGGAGAGAGATGTTCAGGGTATGCAGTGGTAACCCTGGACACTGTTGTTGAAGCCAGATCATTGCCCCAGGGCACTTCAGCCCAGAAAGCTGAACTTGTTGCTTTAATT chr4 - 94230402 58495750 58495749 58496199 35734204 35734203 35734653 450 CTGTGCTGTTAATATAAGAGGCAAGAAAACTGACCTTGGGACTGAACATTACTGTTAGCGTACCACATGCGGTTGCAGCGGTGCTGGAGCAGAAAGGACACTATTGGTTATTCCTAAGCAGGATGGCGCAATACGAAGCAGTACTGCTTGAACAAGAGGATACAGCAAGGGAAGCGTCCAGTGCCCCAAATCCAGAATCATTATCTTTACATGAAAGAGAACTG------GCACGATTGTTTACAAACTATCCAACAGGTGTACTCCACCTATCTgaacctgaaggttactcctt-------aacagaatcccagctgggagctgtttactgatggatgcagctctgctg---tgaaaggagaacagaaggctgggtacaccactgtcagtctacaagaggaaacagaggcaaaactgctagcagtgaacacatctgctcagaaagcttaattaattgctttaact ...:x...:..:..:....:....:x..:.....::.x..:.x:...x.x.x::.x.:x.:x..x.....x..x.:::.xx.:x..:.xxxx........::.....:..x:xxxx:x:..:x.x:.xx.:...x..:xxx.:..x:x....x.xxxxx:..:.:.x.xx....:x.x:.:::...xxx.:.:x.---------..::xx:.:xx.....:...------...:......x..x..::xx.xx.x:x:..x.....:.x.x:x.:x:....xx:..x:xxx....-------..:...-------.x....:..:.x.::x.....:x......::::::---::x.......:x::x:xx.x.....::.x::x..x.x:..:x.x:xx.xx::x..:..x.:.::::.:x.xxx.::...x..x..:.........x..:.x:.........:. 195M9I20M6D65M7D6M7I35M3D113M 232/434 53.5% 450/94230402 0.0% 32/434 7.4% 88034364 NA +3036 chr4 + 190214555 146550169 146550168 146550225 57 GGTGACAGAGCAAGAATCCATCAAAAAACAAAAACAACAACAACAACAAAAAAGACA chr4 - 94230402 12295668 12295667 12295724 81934679 81934678 81934735 57 GGGGAAAAAAAAAAAATCCACAAAAAAAACCCAACAACAACAACAACAAAAAAAACA ..x..x.:.:x..:......:x......xxxx.....................:... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 134254501 55960054 +3121 chr4 + 190214555 146605953 146605952 146606004 52 AGAAGAATAAAAACAAATGAGAAAACAAAGAAACAGAAAAAAATTAAATCCA chr4 - 94230402 87062457 87062456 87062508 7167895 7167894 7167946 52 AGAAAAGGAAAAGCAAATGAGAAAGCAGAGAAACAAACAGAAAAAAAATCCA ....:.:x....:...........:..:.......:.x.:...xx....... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 59543496 NA +3096 chr4 + 190214555 146637547 146637546 146637588 42 TGTGTGTGTGTGTGTGTGACAGAGAGAGAGAGATAGATAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ...................x.............x..:x..:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 127655232 62559323 +3292 chr4 + 190214555 146646425 146646424 146646553 129 TTTTGAGTCCTCTCTCTCTGTCTGTCTC---CCTCCCTCCCTCCCTCCCTTCCTCCTTCTCTTCCTCCCTCCTCTCTCTTCCTCTCCC-------TCTCTCTCTCTCAGATGTGGGGAGTGGGGGAGGCAGCAGTCAGA chr4 - 94230402 92729597 92729596 92729728 1500675 1500674 1500806 132 tttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCCCACAT-------ACAGAAGGGACAGCAGCCAGA ...:x.x.:::..::..:.:.::x:...---:.x...:.:x.::....:..:.::x..:.:.......:...:...x....:..:...-------::.....::.:..x..-------:::.::.:.:......:.... 28M3I57M7I16M7D21M 75/122 61.5% 132/94230402 0.0% 17/122 13.9% 53916828 NA +3327 chr4 + 190214555 146701182 146701181 146701230 49 AAAAAACAAACAAACTAAACAAAAACAAAAACAAAAACAAAAAATCAAA chr4 - 94230402 37057561 37057560 37057609 57172794 57172793 57172842 49 AAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAAATTAAA ...............:.x.x..x.....x.....:..........:... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 109643621 80570934 +3543 chr4 + 190214555 146708278 146708277 146708422 145 ACCCAAATAATGAAGTCAAATATGGGAAGTTTATATATA-------TATATATATATATATATATATATA-----TATATATATATATATACACATGTATGTGTGTGTATATATATAAATACATATATAAACATATATA--TATAAAAACTTCCCACAT chr4 - 94230402 71926734 71926733 71926892 22303511 22303510 22303669 159 ATTCAGTTAATAAAATTCATTTTTGAAGGATTGTATTTACAGTAGCTATTGAAAATTAATTTTATAAATAGCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATATTCCTTAT .::..:x....:..:.:x.x.x.x.:.:.x..:...x..-------...xx.x.xx..xx.x....x...-----.........x.:.::::....::.x:...x........x......xx..:.......:..:...--.x......:x.:..x:.. 39M7I24M5I64M2I18M 97/145 66.9% 159/94230402 0.0% 14/145 9.7% 74781544 NA +3026 chr4 + 190214555 146728754 146728753 146728813 60 TATATGTACATATATATACACATATATATGTGTATATATACGTATATATACACATATATA chr4 - 94230402 17853473 17853472 17853532 76376871 76376870 76376930 60 TATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTA ......:......:........x:..xx.x.....::....:.:...x.x::.....:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 128875281 61339274 +3016 chr4 + 190214555 146762337 146762336 146762396 60 GTGTAATTTCTTTTTTTTTTTTTTTTCCTGTGAGTCTCAATGTCTCTTAAGGCAATGTAG chr4 - 94230402 78398703 78398702 78398762 15831641 15831640 15831700 60 GTGTTCTTTCTTTCTTTTTTTTTTTTCCCCTGTATCTCCAACACTTTTAAAGCAATACAG ....xx.......:..............:x..x:....x.xxx..:....:.....::.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 68363634 NA +3094 chr4 + 190214555 146797281 146797280 146797332 52 AATTATTTTTAAAGCAAATTTAAAAAGAAAAATTATTTTTACTGACATATTT chr4 - 94230402 67871481 67871480 67871532 26358871 26358870 26358922 52 AGTCATTTTTAGAGCAGATTTTGAAAGAAAAATACTTGCTACTGACATACTT .:.:.......:....:....x:..........xx..x:..........:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 78925800 NA +3110 chr4 + 190214555 146797833 146797832 146797899 67 TATATATATATATATATATATATATATATTCGTTCTCTCTTCTTTTCCCTCTCCTTTGGGGCCTCCA chr4 - 94230402 92735352 92735351 92735416 1494987 1494986 1495051 65 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCT--GAATCTCCA ...x.....:...:..:.:...........:x....x.:..:.....:x.:...:.--.:::..... 56M2D9M 48/65 73.8% 65/94230402 0.0% 2/65 3.1% 54062481 NA +3018 chr4 + 190214555 146810574 146810573 146810629 56 TTTTTACATACCTTCTTTTTTTTTTTTTTTTTTTTTGAGGTGGACTCTCACTCTGT chr4 - 94230402 7525423 7525422 7525478 86704925 86704924 86704980 56 TTTTCATATACTTTCATGCTTTTTTTTTTTTTTTTTTGAGTGAAATTTCATTCAGT ....:.:....:...x.x:.................x::...:.x.:...:..x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 139285151 50929404 +3145 chr4 + 190214555 146814720 146814719 146814761 42 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGAGGGGGG chr4 - 94230402 88558241 88558240 88558282 5672121 5672120 5672162 42 ATCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGG ..........:.x.................:..x.:...... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 58256479 NA +3111 chr4 + 190214555 146822107 146822106 146822205 99 AAAGTATTTTCTTTTAAAAAAAAAAAAAAGGGATACATGTGTAGAACACACAGGTTTGTTACATAGATCTACCTGGGCCATGGTGGTTTGCTGCACCTA chr4 - 94230402 11626240 11626239 11626338 82604065 82604064 82604163 99 AAAGGGTTTTCTGTTAAAAAAAAAAATTGAAGATATGAGTTTAGAGTGCACACATCTTTTGTGTAGGACTCTCCTAGACAAAGCCTTTTGCTACAGTTA ....x:......x.............xx:::....::x..x....:::....x:.:.x..:::...:x..x:.:x:.x..x:.:xx......:..x:.. 99M 61/99 61.6% 99/94230402 0.0% 0/99 0.0% 135195867 55018688 +3087 chr4 + 190214555 146877241 146877240 146877345 105 TATGGTTTATTTTCTGATTTTCTGTTTTCTTTTTCTTGATTTTTTTTCTGTTTGCTTATTAGCATTTCCTAAAGTTTCTATCATCAAAGCATG--TTTATTTTGTCA chr4 - 94230402 56101356 56101355 56101452 38128951 38128950 38129047 97 TAGGGTATATTTTGCCATTCCTTATTTTCTTTTTCTTTATTTTTTCTTTCTGTTTTTATTG------CCT----TTTCTAGTTGCAAAACATGATCTTATTGTGTTA ..x...x......x:x...:::.:.............x.......:.:.x.x.x:.....:------...----......x:xx....:....--:.....x...:. 61M6D3M4D19M2I12M 70/95 73.7% 97/94230402 0.0% 12/95 12.6% 90775885 NA +3469 chr4 + 190214555 146930027 146930026 146930119 93 AATATATATATATATATTTATGA----AGATACACACTACATATATTTGTATGTGTGTGTGCATATATATATATATATATATATATATATATATATA chr4 - 94230402 35554921 35554920 35555017 58675386 58675385 58675482 97 AGTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA .:...:.x.x.x.:.x....::.----.::..:.x:...x.........x:........::.....:x:.:.........::...:.x.x..:.:.. 23M4I70M 63/93 67.7% 97/94230402 0.0% 4/93 4.3% 111375106 78839449 +3053 chr4 + 190214555 146930094 146930093 146930165 72 TATATATATATATATATATATATATACACACATATATATCTTGATAAGTTGCCTTCCTAGATCAAAGAAAGG chr4 - 94230402 78828970 78828969 78829041 15401362 15401361 15401433 72 TACACATATCTATGTATACCCACATACACGTATATGTCTCTGTACAAGTTGCCTTTAAAAAAAAAAAAAAAG ..:.:....x...:....:x:.:......::....:.x...xx.:..........:xx.:.xx...:...:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 68101124 NA +3069 chr4 + 190214555 146953770 146953769 146953827 58 AGACTCCGATTCAAAAAACAAAAACAAACAAACAAACAAAAACTATCAACATCCAAAA chr4 - 94230402 28251721 28251720 28251778 65978625 65978624 65978682 58 AAACACAGATTGAACATACAAAAACAAACAAACAAACAAAAAGAGCTAACATACAGAA .:..x.x....x..x.x.........................xx:::.....x..:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 118702049 71512506 +3099 chr4 + 190214555 146990601 146990600 146990672 72 ACATTGCTGTCCTTTGAATGCAGGATGTTTGTTTGTTTGTTTTGTTTTGTTTTTTGCTTTTATCCTCTTTGA chr4 - 94230402 42754739 42754738 42754810 51475593 51475592 51475664 72 ACAGTTCCTCTCTGGGAATGTGGGATGAGTGCTGTTTTGGTTTGTTTTGTTTTCTGTCTTTGTCCTCCTGGA ...x.x.:x::..xx.....::.....xx..:.xx....x.............:..::...:.....:.x.. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 104235862 85978693 +3493 chr4 + 190214555 147013896 147013895 147013969 74 ATTCTACACTTTTATTTGAATTTCACTAGTTTTCTTATGTATCTCTTTTCTG--TTCCAGGATCTCATTCAGGATA chr4 - 94230402 85383655 85383654 85383730 8846673 8846672 8846748 76 ACTCTGCACTTATATTCAAATTTCACTTCTATTCTTATATATCTATTTTTTGTATTACCGGGTTTCATTCTGAACA .:...:.....x....::.........xx.x.......:.....x....:..--..x.x..:.:......x.:.:. 52M2I22M 56/74 75.7% 76/94230402 0.0% 2/74 2.7% 61630241 NA +3135 chr4 + 190214555 147036534 147036533 147036582 49 GGTTCAGAGGGGTTTTTTTGTTGTTGTTTTTTTTTTTTATTGTCCCTGT chr4 - 94230402 59743358 59743357 59743406 34486997 34486996 34487045 49 GGTTCAGAGGGGTTTGCTTGGTGTGGTTTTTTTTTTTTGCTGTTGTTGT ...............x:...x...x.............::...:x:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 87293176 NA +3030 chr4 + 190214555 147047780 147047779 147047833 54 CAGAGTAAGACTCCATCTCAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAAAAA chr4 - 94230402 4077718 4077717 4077771 90152632 90152631 90152685 54 CACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAA ..x...:.:.:.:.x...x.............x.:....:..:....:...:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 142970062 47244493 +3118 chr4 + 190214555 147072131 147072130 147072198 68 AAGAAGTTCTTTATTTAAAAAAAAAAAAGAAAAAAGAAAAGAAAAAATTTTGGCCTGGTTAAAATGCA chr4 - 94230402 45758373 45758372 45758440 48471963 48471962 48472030 68 AGAAAGTACTACATGGCAAAAAGAAAAAGAAAAAAGAAAGAAAGAAATACCAGTGTGGTTAAAAGGTA .::....x..x:..xxx.....:................::..:....x:::.:x.........x.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 101313758 88900797 +3013 chr4 + 190214555 147095403 147095402 147095480 78 ATATATATACGTGTATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACGTATATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.:..:....::...x...:::..x....::.:...::x...:.xx...:.:.......:.:...x::.:.x.. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 138699615 51514940 +3013 chr4 + 190214555 147095439 147095438 147095516 78 ATATATATACGTGTATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACGTATATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.:..:....::...x...:::..x....::.:...::x...:.xx...:.:.......:.:...x::.:.x.. 78M 49/78 62.8% 78/94230402 0.0% 0/78 0.0% 138699651 51514904 +3272 chr4 + 190214555 147095475 147095474 147095557 83 ATATATATACGTGTATATATACACACATATACACGTATATATATACGTGTATATATACACACATATACACATATACACGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:..:....::...x...:::..x....::.:...::x...:.xx...:.:.......:.:...x.:.:.x.:.x... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 138699687 51514868 +3102 chr4 + 190214555 147095593 147095592 147095655 63 ACGTGTATATACACACATATACACATATGTATATATACGTGTATATACACACATATACACATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ..:x:......x.....x.........::.:.:x..:.x......x.....:::...:.:... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 129574844 60639711 +3184 chr4 + 190214555 147095670 147095669 147095736 67 TATATACACACATACACATGTGTGTACATACACACAAGTGTATGTACACACATACACACGTGTACAT chr4 - 94230402 38535896 38535895 38535962 55694441 55694440 55694507 67 TATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCAT ...........:....::x.x:.::...........x.........::..:.:.x:x..:x.x:... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 108559774 81654781 +3155 chr4 + 190214555 147095687 147095686 147095757 71 ATGTGTGTACATACACACAAGTGTATGTACACACATACACACGTGTACATACACACAAGTGTATGTACACA chr4 - 94230402 4481682 4481681 4481752 89748651 89748650 89748721 71 ATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ......x.x....:.x:::x........:....x.:.:....:.x:......x.xx.x:.:.......... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 142614005 47600550 +3586 chr4 + 190214555 147095855 147095854 147095955 101 ACATACACACAAGTGCATGCACACACATAT------ACACATAT----ATACATACATATACACATGTGTATATACACATGTGTATATACATACATATACACATGTGTATA chr4 - 94230402 89016082 89016081 89016192 5214211 5214210 5214321 111 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACA .::.:......xx..............::.------.....:..----..:......::..x.::.....::.x....x..:.:.:.:..:x.::::.:.x....x.:.:. 30M6I8M4I63M 68/101 67.3% 111/94230402 0.0% 10/101 9.9% 58079773 NA +3215 chr4 + 190214555 147095858 147095857 147095990 133 TACACACAAGTGCATGCACAC---ACATATACACATATATACATACATATACACATGTGTATATACACATGTGTATATACATACATATACACATGTGTATATACACATATGTGTATATA-GATACATATAC--ACATAT chr4 - 94230402 4417317 4417316 4417453 89812950 89812949 89813086 137 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACA--CACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATAT ....::.xx..x...:x.x..---.x..x..x...........:...:.--....x.x::...::..::x.x..x.::....::..xx.x:...x.:x............x.:.x....-.x:...x.:..--...... 21M3I25M2D68M1I11M2I6M 89/131 67.9% 137/94230402 0.0% 8/131 6.1% 142678541 47536014 +3026 chr4 + 190214555 147096032 147096031 147096098 67 TGTGTATATACACATAAGTGTATATATGCGTGTATATACGTATATAAACACATATGTGTATATATGT chr4 - 94230402 32959568 32959567 32959634 61270769 61270768 61270835 67 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT ......:x..:....:.....x.:.:.:....::....:::.....x...x....:.x:..:xx... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 114136464 76078091 +3126 chr4 + 190214555 147096085 147096084 147096129 45 ATGTGTATATATGTGTGTGTGTGTATATATATATAGACAGAGAGA chr4 - 94230402 50558514 50558513 50558558 43671845 43671844 43671889 45 ATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAA ......x.:.:......::........:..:............:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 96537571 93676984 +3230 chr4 + 190214555 147102572 147102571 147102642 71 AAAAAAAAAAAGAAAAAGAAAAAAAGAAAAAAAAAGAAAAGAAAAAGAAAGAAAGAAAAGAAAAGAAAGAA chr4 - 94230402 65614387 65614386 65614457 28615946 28615945 28616016 71 AAAAGGAAAAAGGGAGAGAGTAGAAAACACAGAATGACAAGTGAAGCAAAGGAGAAAAAGAAGAGAAAGAA ....::......::.:...:x.:..:.x.x.:..x..x...x:..:x....:.::.......:........ 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 81488185 NA +3049 chr4 + 190214555 147102584 147102583 147102630 47 AAAAAGAAAAAAAGAAAAAAAAAGAAAAGAAAAAGAAAGAAAGAAAA chr4 - 94230402 42895013 42895012 42895059 51335344 51335343 51335390 47 AAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAA ..:.:....:..:...............:.x.....:....x..:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 104207571 86006984 +3376 chr4 + 190214555 147110389 147110388 147110470 82 AGAGAGAGAGAGAAGGAAGGA-AGGGAGTAAGGGAGGAAGAGAGGAAGAAAGGAAGAAAGGAAGAGAAAAAAACGCAATTACT chr4 - 94230402 25066985 25066984 25067065 69163338 69163337 69163418 81 AAAGACAGACAGAAGAAATAACAGAGAGT--GGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAATCAACTATT .:...x...x.....:..x:.-..:....--.....x.::..:....:....:......:..x:......:..xx...:..:. 21M1I7M2D52M 59/80 73.8% 81/94230402 0.0% 3/80 3.8% 122043404 68171151 +3354 chr4 + 190214555 147170859 147170858 147170907 49 CTAGAACTTAAAGTAAAACAAACAAACAAAAAAAACCAACAACAAAAAA chr4 - 94230402 54395890 54395889 54395938 39834465 39834464 39834513 49 CTAAAAAGCAAAGCAAAACAAACAAACAAAAAAACCCAACAACACAAAA ...:..xx:....:....................x.........x.... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 92774969 NA +3293 chr4 + 190214555 147174453 147174452 147174522 70 AATTAGGAAAATTTTTTTAATGTAAAAACAAACAACAATCAACCAACCAACCA-----------AACAAACAAAAAAAAAC chr4 - 94230402 79236376 79236375 79236456 14993947 14993946 14994027 81 AAGTATGGAGAGTGTATTACCAGAAAAAAAAACAACAACCAACCAACCAACCAAACTAAAAAACAACaaacaaaacaaaac ..x..x.:.:.x.x.x...x::x.....x.........:..............-----------...........x..... 53M11I17M 56/70 80.0% 81/94230402 0.0% 11/70 15.7% 67938077 NA +3409 chr4 + 190214555 147174477 147174476 147174521 45 AAAACAAACAACAATCAACCAACCAACCAAACAAACAAAAAAAAA chr4 - 94230402 63063423 63063422 63063467 31166936 31166935 31166980 45 AAGGCAAAAAAAAACCAACCAACCAACCAAACAAACAAAAAAAAA ..::....x..x..:.............................. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 84111054 NA +3371 chr4 + 190214555 147261106 147261105 147261186 81 TCTCAAAAAAAAAAAAAAAAAAAGAAACCTAAGAGAAGTGATAGATAATGGAGACAGGCAAAGAAAAGTAAACACATACAA chr4 - 94230402 79828833 79828832 79828913 14401490 14401489 14401570 81 TCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAAGTGGATTATGGCTACAGATGAAGAAAGATGAACTCACAAAA ...:..........:.....:..:...xxx::..:..:x::.:...x....xx....:::......::.:...x..:.x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 67432273 NA +3665 chr4 + 190214555 147350211 147350210 147350277 67 GAAGGGAGAGAAGGAGAAAAAGGAGAGAAGGAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAGGGAGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAA--AAGGGAGCGGGGGTGGGGGG .::.:...:........:...:..:.......x...x..:.....--.......x.:...x...:.. 45M2D20M 51/65 78.5% 65/94230402 0.0% 2/65 3.1% 78283526 NA +3081 chr4 + 190214555 147350214 147350213 147350360 147 GGGAGAGAAGGAGAAAAAGGAGAGAAGGAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAGGGAGGAAGGAGAAAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAACAAAGAAACAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGA chr4 - 94230402 66251438 66251437 66251584 27978819 27978818 27978965 147 GGCAGGGAACAGGAGAAAGTAGGGGAAAAAAGGCATATATAGAGAAAAAACACATAGACGGAAGGAAAGGAAAGTCAAGAGAGCTAAGGCACAGAAAAATAACTAAAAACATATCAGTGCAACAAAAGTAGCAAGAGAAAAAAAAAA ..x..:...x::..:....x..:.:.::..:.:x:x.x.x.::...:::.x:x.x:..x...:.:.:::.....xx..:::..xx.:.:x:x.:.:...x..x:...:.x.:.xx::x:...x:....x.:x..:..........:. 147M 80/147 54.4% 147/94230402 0.0% 0/147 0.0% 81098776 NA +4543 chr4 + 190214555 147350297 147350296 147350442 146 GAAGGAAGGAAAGAAAGAAA-CAAAGAAACAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGATGGAGGGAGGGAGGAAGGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAAT chr4 - 94230402 72821452 72821451 72821597 21408806 21408805 21408951 146 GGGGAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAA-GAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAAATAGAAAGAACCAGTAAAAAGGAAAATAAAAGT .::.:....x.....::...-..:.xxx:..:x...:.x...:::........-.....:......x:.xx..x.x.....::...:....xx.:xxx............x..:.x....::..xx.:x.:....:..:.x::..:. 20M1I32M1D93M 95/145 65.5% 146/94230402 0.0% 2/145 1.4% 74528845 NA +3283 chr4 + 190214555 147350352 147350351 147350473 122 AAAAAAAGAAAGGGATGGATGGAGGGAGGGAGGAAGGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAAC chr4 - 94230402 44400475 44400474 44400595 49829808 49829807 49829928 121 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCA-CAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAAC ......x:..:x.x:..x:..::..::...:..:::..::::.......:..:...........:x::.x....:x...xx.-x..:....::.:xxxxx:xx......:xx...:...... 82M1D39M 73/121 60.3% 121/94230402 0.0% 1/121 0.8% 102949877 87264678 +3791 chr4 + 190214555 147350387 147350386 147350554 168 GGAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAG---AAAAAGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGA------AAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAG chr4 - 94230402 88096836 88096835 88097012 6133391 6133390 6133567 177 GGAGAGAGAAAAAAAAAGTAAAAACAAACAAACAGCCAACAAGCAAGCAACAAGAAATCCATGAAAAAGAAATGAAAAAGAAGCACCAACTTCAACACTTTGAAAATAAAATAGAAAAAGAAATAAAAAACAAAAGATATCTGCAGTAAAAAGGATTAGAAGAGAAAGGACAACAAG ...::......:......x...:.x.:.x:..x:---..x...x...x..x...:..x:x.x..:.......x:...:.:.::x.xx...xxx:.x.xxxx.....x....x.:.:....::..::.:::x::....------x..x.:....:.xx....:......:.x..x:.. 34M3I100M6I34M 104/168 61.9% 177/94230402 0.0% 9/168 5.4% 59253551 NA +3081 chr4 + 190214555 147350430 147350429 147350489 60 GAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAA chr4 - 94230402 6088193 6088192 6088252 88142151 88142150 88142210 60 GAAGCAAGAACTTAAAGAGCTGGAAAAAGAAAAGAAAAAGAAACAAACAAAGAAAGTAAA ...:x...:.xx.......xx:....:.:..:.:.:...........x........x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 141262237 48952318 +3081 chr4 + 190214555 147350430 147350429 147350489 60 GAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAA chr4 - 94230402 6084522 6084521 6084581 88145822 88145821 88145881 60 GAAGCAAGAACTTAAAGAGCTGGAAAAAGAAAAGAAAAAGAAACAAACAAAGAAAGTAAA ...:x...:.xx.......xx:....:.:..:.:.:...........x........x... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 141265908 48948647 +3109 chr4 + 190214555 147350446 147350445 147350579 134 GAGAAAGAAAGAAAAGAAAGAAAGAAACAAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGAAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGA chr4 - 94230402 40465776 40465775 40465899 53764504 53764503 53764627 124 GAGAAGGGATGACAAGAATGAGA---------AAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGA-AAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGA .....:.:.x..x.....x..:.---------....:x...:...x..::::.:.x:..x:..........:.:.:....-..:..:.::.:...:.:x:...xxx..:.xx:..xx...:x.:x.x::..... 23M9D48M1D53M 77/124 62.1% 124/94230402 0.0% 10/124 8.1% 106884670 83329885 +3383 chr4 + 190214555 147350457 147350456 147350596 140 AAAAGAAAGAAAGAAACAAAGAAAG----AAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAAGAAAGGAGAAAGAAAAAGAAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAGAAAGAGA chr4 - 94230402 2800987 2800986 2801130 91429273 91429272 91429416 144 AAAAGAGAGGAGGAAGCAACAGAAGTCTGACTGACAGGGATAAAAATGAAGGCATAAACCATGTGGGAGATGCAGGAAGGTAAGAGGCAAAAGGAGCACATGAAATAGAGAAAGAATGAAGAACAGAATACAGCAGAGAAAAGA ......:..:.:...:...x::...----.xx..x.:.:.x.....x:....x..::.xx:x.x::..:.x.x:::.:::x....::x:....:..x.x:x....x.:........x....:.x....x:x..x.:::..:... 25M4I115M 83/140 59.3% 144/94230402 0.0% 4/140 2.9% 144549470 45665085 +3579 chr4 + 190214555 147350474 147350473 147350543 70 AAAGAAAGAAAGAAAAGAAAAAAAAGAAAGGGATGGAGGGAGGAA---GAAAGGAGAAAGAAAAAGAAAAGAA chr4 - 94230402 40472547 40472546 40472619 53757784 53757783 53757856 73 AAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA ...:.......:...:..........:.:...:x..:...:..:.---:.:...x....:.:.x:...:.... 45M3I25M 52/70 74.3% 73/94230402 0.0% 3/70 4.3% 106877927 83336628 +3531 chr4 + 190214555 147350530 147350529 147350646 117 GAAAAAGAAAAGAAAGAAGAAAGAGAAAGAA-----AGAAAGAAGGAAGGAAAGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAA chr4 - 94230402 11253652 11253651 11253772 82976631 82976630 82976751 121 GAAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAA-AAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA ...:......x...:......x:.x....::-----...x....-:........:.:::....:::.x....:xx.x.x...:.:x.:.x:....::x..:.::..x:..:..x...x.... 31M5I8M1D77M 76/116 65.5% 121/94230402 0.0% 6/116 5.2% 136096878 54117677 +3745 chr4 + 190214555 147350542 147350541 147350749 208 AAAGAAGAAAG-AGAAAGAAAGAAAGAAGGAAGGAAA------------GAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGA-AAGAAAGAAGGAAAG-AAAGAAAGAGAAAGAAAG-------AAAGAAAGAAAGAAA chr4 - 94230402 72111981 72111980 72112205 22118198 22118197 22118422 225 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAGAGGTACTAAGGAC-----ATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGTGAGTCCAGGAAGGGAATGGAAGTACTGCCAAACAAAGAGTGAGa .:.......:.-....x:...:.:......x.x:...------------.x....x:::.::.....x:.xx..:x..:...x::..:.x:..:...:.:....xxx........::.:..::..xx:..:.x-----.x:........x.xx.x:...:..x..x..x.:x.-::.......x.x:..-xx..:...:...x.:...-------...x.....:x..:. 11M1I25M12I84M5D35M1I15M1I18M7I15M 130/203 64.0% 225/94230402 0.0% 27/203 13.3% 75238561 NA +3014 chr4 + 190214555 147350544 147350543 147350612 69 AGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAA chr4 - 94230402 56911850 56911849 56911918 37318485 37318484 37318553 69 AGAAGAAAGGGAAAGAAAGAAGGAAAGAAGGGAAGGGAAAATGTATTAAGCATCAGTAACACAACAGAA .........:...........:...:.....:...::.:..x.x.xx...x:xx..x..x.x.:x.... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 90438694 NA +3585 chr4 + 190214555 147350577 147350576 147350698 122 AGAAAGAAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAG----AAAGAAAGAAAGAAGG------AAGGAAAGAAAGAAGGAAATAA-AGAGAAAGAAAGAAAA----------GAAGAAAGAAAAAGAAAGAAAGAAAGAA chr4 - 94230402 42084012 42084011 42084154 52146249 52146248 52146391 143 AAAAGGGAGTAGAAGTGGAGAAGAGAGAAAGAAGAAAAAGCCTAGAAAAGACACATATGGTGTGCAAAGGGAAGAGTGTAGGAACTGACAGAAGAACAATGAGAATCAGATGCTGGAAAAAAAAAAAAGGAGGGAAGAGAGAA .:..:.:..x.::.:x.:::....:............:..----:..:.:.x.x.x.x..------....:....:x.x.....x.:.-...::..x..x..:..----------...:...:......:.:.:....:.... 40M4I16M6I22M1I16M10I28M 85/122 69.7% 143/94230402 0.0% 21/122 17.2% 105266565 84947990 +3206 chr4 + 190214555 147350583 147350582 147350687 105 AAGGAAGAAAGAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAA chr4 - 94230402 27006352 27006351 27006456 67223947 67223946 67224051 105 AATGGAGGAAGGGGAGAAGATGAAGAAACAAGAAGCAAACAGCATGTGTGAAGGAGAAATAGCATAAATGAAGACTGAAGAACTACAAGGAAAAAGAAAAAGAAA ..x.:..:...:.:.::.:.x:.....:x....::x.:.x..x.x.x:x......:.:.x..x.x:..xx..::xx:.....xx.x...:.:............. 105M 65/105 61.9% 105/94230402 0.0% 0/105 0.0% 120344231 69870324 +3040 chr4 + 190214555 147350602 147350601 147350710 109 AGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 73209987 73209986 73210095 21020308 21020307 21020416 109 AGGAAGCAAGAAAAGAAAGAAACGATGCCGTAAGTATGAAAAAGATCCATGGGAGAGACAAAACAAGAAGAGGAAACGAGGAGGAAGCTAAAAGAAGAAAAAGACAGGA ..:...x.::..:.........x:.x.xx.x...x.x::...::.xxx.xx::.....x.:..x:.:....:....x:.::..:...xx.:..::.:.:.....x..:. 109M 65/109 59.6% 109/94230402 0.0% 0/109 0.0% 74140615 NA +3080 chr4 + 190214555 147350606 147350605 147350654 49 AGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAA chr4 - 94230402 56911850 56911849 56911898 37318505 37318504 37318553 49 AGAAGAAAGGGAAAGAAAGAAGGAAAGAAGGGAAGGGAAAATGTATTAA .........:...........:...:.....:...::.:..x.x.x... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 90438756 NA +4390 chr4 + 190214555 147350607 147350606 147350749 143 GAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAG------AGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44053988 44053987 44054136 50176267 50176266 50176415 149 GAAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ......x.::::.........::.:.:..:x......:x:..:.:xx::.------............:.x..:..x...x.x:..::.x........x:.x:x...::x..:x:..x.:.:::......:.:::x..x:...x..... 50M6I93M 89/143 62.2% 149/94230402 0.0% 6/143 4.2% 103296619 86917936 +3613 chr4 + 190214555 147350611 147350610 147350742 132 AAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGA------GAAAGACTGTGAA--AAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGA-AAACACCGGAAAGGAGAGGAATAAAG ...x.:....:.........:::...::...------....x.xx.x...--....x....:xxx....x.....xx....x.:.::..x:.:....:..:..:.-...x.xx.::..:..:..:..x.... 31M6D13M2D53M1D26M 84/123 68.3% 123/94230402 0.0% 9/123 7.3% 116817447 73397108 +4304 chr4 + 190214555 147350649 147350648 147350772 124 AAATAAAGAGAAAGAAAGAAAAGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG-GAGAGGAATAAAG .......:..:.............:.::...:.....xx.x:.:....x..:::xxx....x::.:.xx:.:.x...::..x:.:....:.....:.:..x:xx:.....-:....:..x.... 110M1D13M 80/123 65.0% 123/94230402 0.0% 1/123 0.8% 116817485 73397070 +3182 chr4 + 190214555 147350670 147350669 147350733 64 AGAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAGAAAGAAA chr4 - 94230402 27809321 27809320 27809384 66421019 66421018 66421082 64 AGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTAGAAA ..:......:::....x:....x...::......x...:.:.:......:....:.xxx..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 119541349 70673206 +3731 chr4 + 190214555 147350679 147350678 147350784 106 AAAAAGAAAGAAAGAAAGAAA------GAAAGAAAGAAGGAAAGAAAGAAAGAG----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAA-------GAAAGAGAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........------..:.......xx.x:.:....x..::.----.:.x.....xx....x.:.::..x:.:....:.........-------:..:.....:..x.... 21M6I27M4I41M7I17M 78/106 73.6% 123/94230402 0.0% 17/106 16.0% 116817515 73397040 +3367 chr4 + 190214555 147350841 147350840 147350912 72 GGGGAGGGGGAGAGAAGAGGGAGGGGAGGGAAGGAAAGGGAAGGGGGAAAGAAGGGAAGGGAAGGGAAGAGG chr4 - 94230402 10584954 10584953 10585025 83645378 83645377 83645449 72 GAGGAGTAGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGAGTAGG .:....x:.....:::..:xx:.:.x...:.........:..........:.x.:::::..:.....:x... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 136765887 53448668 +3123 chr4 + 190214555 147398294 147398293 147398367 74 GAAAGAAGGGAAGAAAGAGAGAGGGAGGAAAGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGA chr4 - 94230402 60249500 60249499 60249573 33980830 33980829 33980903 74 GAATGGGGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGA ...x.::.:x.:.....:...:..:..x.x.....::.....x......x:...xx.....x:...x:..::.. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 87148794 NA +3033 chr4 + 190214555 147421202 147421201 147421282 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 110562908 79651647 +3022 chr4 + 190214555 147421206 147421205 147421286 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 110562912 79651643 +3011 chr4 + 190214555 147421210 147421209 147421290 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::...:.. 81M 52/81 64.2% 81/94230402 0.0% 0/81 0.0% 110562916 79651639 +3002 chr4 + 190214555 147497149 147497148 147497194 46 CTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTAGAGATGGGGTCTTG chr4 - 94230402 46673276 46673275 46673321 47557082 47557081 47557127 46 CTTTCTTTTTCTTTTTTTTTCTTTTTTGTTTAAAAATAAAGCTTTG ....:.....:.........:...........:.:..:::.::... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 100823873 89390682 +3015 chr4 + 190214555 147505204 147505203 147505245 42 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGACAACATCTAAT chr4 - 94230402 87676347 87676346 87676388 6554015 6554014 6554056 42 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAAT .............:.................x..:.x.x... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 59828857 NA +3015 chr4 + 190214555 147507194 147507193 147507250 57 AAAGTTCCTTATTTTGAGGGGGGAAAAAAAAAAACCCTGTACATTAACACTCACAGT chr4 - 94230402 14367814 14367813 14367870 79862533 79862532 79862589 57 AAAGACACTTATTTTGAGGGGGAAAAAAAAAAAGCCCGACAAAGTCACACTTCCAAT ....x:x...............:..........:...x::.x.x.x.....:x..:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 133139380 57075175 +3388 chr4 + 190214555 147523411 147523410 147523492 82 TTGGGATTTGGTATGTCACTGCTACAGAGAGTCTGTTTT-----------GTTGGGTGTTTGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTT chr4 - 94230402 70105195 70105194 70105287 24125116 24125115 24125208 93 TCAGAATTTGGTCTGTGCTTGTGGCAAGGTGGGTGCTTTATTATGAAAGAGCTGTGTGTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTT .::.:.......x...xx:..:x:..::.x.xx..:...-----------.:..x......x......x...............x........ 39M11I43M 61/82 74.4% 93/94230402 0.0% 11/82 13.4% 77418216 NA +3049 chr4 + 190214555 147523447 147523446 147523494 48 TTTGTTGGGTGTTTGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTT chr4 - 94230402 70541021 70541020 70541068 23689335 23689334 23689382 48 TCTGTTTGTTGGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTTTTTCTT .:....x.x..x.........x...............:...x...:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 76982426 NA +3193 chr4 + 190214555 147523452 147523451 147523507 56 TGGGTGTTTGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTT chr4 - 94230402 75733735 75733734 75733787 18496616 18496615 18496668 53 TGGTGGTGGGTTTTTTTTTGTTGTTGTTGTTTG---GTTTTTTTGGTTTTTTTTTT ...xx..xx.......................x---........x........... 33M3D20M 47/53 88.7% 53/94230402 0.0% 3/53 5.7% 71789717 NA +3307 chr4 + 190214555 147523460 147523459 147523516 57 TGTTTTTTTTTGTTGTTGTTGTTTTTTTGTTTTTTTTGTTTTTTTTTTTGAGATGGA chr4 - 94230402 2885711 2885710 2885767 91344636 91344635 91344692 57 TGTTTCATTTTGTTCTTGTTGTTTTGTTGTTGTCTTTGTTGTCTTTTAAGAGATGAA .....:x.......x..........x.....x.:......x.:....xx......:. 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 144637749 45576806 +3041 chr4 + 190214555 147532981 147532980 147533085 105 CTAGATGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATACATATGCTATTTGTTTTTATAATAATGAATACAACACAACAATTTC chr4 - 94230402 61428325 61428324 61428424 32801979 32801978 32802078 100 CTAGTGGTGTCATTCTCTCTGTG-ATAGGTGT-TGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTATCAATGGATAGAA---AAAGATTTC ....xx....xxx.x.x.x....-..:x....-...:......:.......:.........:.:::x....x..xx.:..x:....:...x..---..x:..... 23M1D8M1D60M3D9M 72/100 72.0% 100/94230402 0.0% 5/100 5.0% 86104656 NA +3211 chr4 + 190214555 147554343 147554342 147554393 51 ACATTTTATATATATATATATATATATGTATATGTATATATATATATAATT chr4 - 94230402 28944770 28944769 28944820 65285583 65285582 65285633 51 ACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATAATT ..........x.:.:.:.x........:x............:..x...... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 118609573 71604982 +4018 chr4 + 190214555 147558226 147558225 147558379 154 GAAGGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGGAAGGAAGAAAAGAAAGAAGGGAAGACAAAGAG-AGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 44053991 44053990 44054136 50176267 50176266 50176412 146 GAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAA--GAAAGAAAG------AAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCG-GATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ...x.:.....:...:..:......::x...:..:x::...:.x::.xxxx...--.....:...------....x.:..:x...x.......:-........x..x.x..:.:x.::x.-:.x....:.......:.:::x..x:...x..... 54M2D9M6D23M1I25M1D34M 97/145 66.9% 146/94230402 0.0% 10/145 6.9% 103504235 86710320 +3137 chr4 + 190214555 147558332 147558331 147558431 100 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAAGCAGGAGGAGGAGGAG chr4 - 94230402 61334701 61334700 61334800 32895603 32895602 32895702 100 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAG ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x.::...x.x......x:.x:::.:....xx:.:..:.:...... 100M 62/100 62.0% 100/94230402 0.0% 0/100 0.0% 86223631 NA +3594 chr4 + 190214555 147558354 147558353 147558440 87 AAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAAGCAGGAGGAGGAGGAGGGAAGGAAG chr4 - 94230402 32944083 32944082 32944171 61286232 61286231 61286320 89 AATAAGGACAGAACCAGAAGAGGAGAGAGTGGGAGATGGGAGGAAAGACAGAAAAGAACAGACAACTGGAGGAGGCAGAGAGGAGGAAG ..x..:..x....--....::::...:..x::....x:.:.:......x.:.......x::.x.:.x........x:...:.:...... 13M2I74M 60/87 69.0% 89/94230402 0.0% 2/87 2.3% 114614271 75600284 +3160 chr4 + 190214555 147558367 147558366 147558418 52 AGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAAAAGAAAGAAAAGCA chr4 - 94230402 45972464 45972463 45972515 48257888 48257887 48257939 52 AGAATTAAAGGAAGGCAGAGAAAGAAAGATAATGAAAAAAAAAAGAAAAACA ....xx....:...:x.............x.:x.......:........:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 101585903 88628652 +3251 chr4 + 190214555 147558391 147558390 147558459 69 AAAGAAAGAGAAAAAAGAAAGAAAAGCAGGAGGAGGAGGAGGGAA---GGAAGGAAGAAAGGAAGGAAGGAA chr4 - 94230402 40472547 40472546 40472618 53757785 53757784 53757856 72 AAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGA ...:.....:.....:....:.....x...:..:..:..:...:.---:::...x::...:..x.....::. 45M3I24M 49/69 71.0% 72/94230402 0.0% 3/69 4.3% 107085844 83128711 +3015 chr4 + 190214555 147572082 147572081 147572123 42 GGTGGTTTTTGTTTTTAGGGTTTTGCTTTTTTTTTTTTTTTT chr4 - 94230402 48640835 48640834 48640876 45589527 45589526 45589568 42 GGTGGTTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTTCCT ................x..x.....x.............::. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 98931247 91283308 +3804 chr4 + 190214555 147584382 147584381 147584460 79 CTGTAACCTCCACCTCCTGGGTTCAAGTAATTCTCCTGCCTCAGCTTCTCAAGTAGCTGGGATTACAAGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..::.:..:xx.x..:............:x...x.xx.x......:.:............:.:....--.:........ 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 129387256 60827299 +3131 chr4 + 190214555 147685210 147685209 147685280 71 TCTTTCTTTTCTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGC chr4 - 94230402 50985357 50985356 50985427 43244976 43244975 43245046 71 TTTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTTCTCTTTATTCTTTTTTTCCCTGAAAAAGAGC .:.:.:.....:xx:..x....:....xx...:...x...:.:...x..:.......:::...:.x..... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 96699853 93514702 +3064 chr4 + 190214555 147690104 147690103 147690164 61 TGAGGCACTGCGCCCAGCCTGGTTCATTCTTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTT chr4 - 94230402 80211489 80211488 80211547 14018856 14018855 14018914 59 TGAGGTTCTGC--TCAGCCATGTTCCCTCTCTTTTTCTCTTTCTTTCTCTTATTTCTATTT .....:x....--:.....xx....x:...:.......:.......:....x.....x... 11M2D48M 47/59 79.7% 59/94230402 0.0% 2/59 3.4% 67478615 NA +3120 chr4 + 190214555 147692570 147692569 147692614 45 ACTGAAACTCTGTCTCAAAAAAAAAAAAAAAGAAAAAGGGAAAAA chr4 - 94230402 41477420 41477419 41477464 52752939 52752938 52752983 45 ACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAA ...:.x.:.....x.:....................:..:..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 106215150 83999405 +3163 chr4 + 190214555 147708630 147708629 147708715 86 TTATAAGAGCCAGGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTAAGAGAGGAAACAAGTTTTCAAAGTTCTAAATAAGTT chr4 - 94230402 68788614 68788613 68788699 25441704 25441703 25441789 86 TTAAAATAATCAATTTTCTTTTTCATTTTGTTTTGTTTTATATGCTGTTAAAATAAGAAACAAGTATGTACTAATTTAATTAAGCT ...x..x.::..:x...:.x...::..............:.x.xx.x....:.x.:.........x.x:.xx:x.:...x....:. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 78920016 NA +3044 chr4 + 190214555 147719187 147719186 147719220 34 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929945 75300458 75300457 75300491 34 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT .:................................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 128789275 61425280 +3144 chr4 + 190214555 147719187 147719186 147719221 35 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTG chr4 - 94230402 18929914 18929913 18929948 75300455 75300454 75300489 35 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG .................:................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 128789273 61425282 +3041 chr4 + 190214555 147719188 147719187 147719232 45 CTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGAGACAGGGTTT chr4 - 94230402 63778263 63778262 63778307 30452096 30452095 30452140 45 CTCTCTCTCTCTCTCTCTTTTTTTTTTTTTCCTGGAAGTAGGCTT ..............................::..::.xx:..:.. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 83940925 NA +7871 chr4 + 190214555 147732076 147732075 147732497 422 GCTGCCGGGATTGGGGCGCCGCAGCTAGCGCTG-GTCTCGGTGGCAGCTCCTCCGCGCCGCAGGACTCGGCTCTACGGGACAT------GTCCGTG---------CCGCGCTCGCCGCGCGCCCGGGCCTGCTAGCTCCTCTGTGCTCCCTGAACGCGCGGCGCCGCACCTGGCAG--CGGCCTCGGAGCTCGG-----------------------CTCGGGCAGGAGCG-CGCGGCCGTGCGCACCGCGCAGCGACCGCTGCCGTCATGGGGCTGCAGCCCCTGGAGTTCAGCGACTGCTACCTCGACAGCCCGTGGTTCCGGGAGAGGATCCGCGCTCACGAAGCGGAACTCGAGAGGACCAACAAGTTCATCAAAGAGCTCATTAAGGACGGGAAGAACCTCATCGCTGCGACGAAAAGTAAGCGGGGACGCGGGCGCGGACGGGCTGCGGCGTGGCGAG chr4 - 94230402 93718439 93718438 93718870 511533 511532 511964 432 gccgccgccATCTTGGCTGCAGAGCCGACGTGGCGCCTCGATTGCGTCATTATCGCGCGCGGCGTCTCAGCGTCACGTGCCGCCGTAGCGTCCGTGGTAACGAGGCTGTGCTCGTCGCGCCTCCCGGCCGGCAGG----------------GGGCGC-CAGTGCCGCGCACAGAAGATCGGGGTTGGGGCGGGGGNNNNNNNNNNCCCAGCCCGCCCCTCCCGCAGCGGCGTCCCGGCCGTACCCGGCGCG----GCCCCGCGCAGCCATGGGGCACCCGCCGCTGGAGTTCAGCGACTGCTACCTGGACAGCCCCGACTTCAGAGAGCGGCTCAAGTGCTACGAGCAGGAGCTGGAGCGCACCAACAAGTTCATCAAGGACGTGATCAAGGACGGCAACGCGCTCATCGCCGCCATCCGCAGTGAGT-----------CCCGGCGGGGCTCCGCCGCCCCGAG ..:....xx..:xx...xx.:x...:::..:x.-.:....:.x..:x.x::x:.....xxx:x.x...:..x::...x.x.::------.......---------.:.:.....:.....x:..x....x..x:.----------------.::...-.:.:.....:.x::.x..--...xx.:..:..xx..-----------------------...xx....x:...-.x.......:.x.:x....----.x..xx:..x.:........xx.x...x.......................x........xx:x...x.:...x..x..x:xxx::....:xx...:..x...x.x.................:..xx.x..:........x..x:xx........:..x.:xx:x...:..:-----------.x...xx.....x..x..:xx.... 33M1I49M6I7M9I30M16D6M1D18M2I16M23I14M1I19M4D173M11D25M 258/390 66.2% 432/94230402 0.0% 74/390 19.0% 54013637 NA +3765 chr4 + 190214555 147751861 147751860 147751939 79 TATACACTTTCTGAAGCCTTTAGTTTTTTTTTTTTTTTTTTTTTAAGATGGAGTGTTGCTCTG----CCATCAGGTTGGAGTG chr4 - 94230402 76182407 76182406 76182489 18047914 18047913 18047996 83 TATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTTCATCATTAAGGCAGAGTG ...:.x:...:..xx.:...:..........x................x::..x....:....----:...:.:.x::..... 63M4I16M 59/79 74.7% 83/94230402 0.0% 4/79 5.1% 71569454 NA +3607 chr4 + 190214555 147763387 147763386 147763468 82 CTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTATAGGCATGTGCCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:..:..:xx:x..:...........:.x...x.xx.x........:..:.........:....:.--.:..::....::. 67M2D13M 57/80 71.2% 80/94230402 0.0% 2/80 2.5% 129566261 60648294 +3161 chr4 + 190214555 147763709 147763708 147763786 78 AGGATTGAGAATA-ATTTTTATAGACAGATGGTGATTCCTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACAGAGTTTTG chr4 - 94230402 46673243 46673242 46673321 47557082 47557081 47557160 79 AGGAATGTGAAAACACTCATAAAGATGGACATACTTTCTTTTTCTTTTTTTTTCTTTTTTGTTTAAAAATAAAGCTTTG ....x..x...x.-.:.:x..x...::..::xxxx...:....:.........:......x........:.:..:.... 13M1I65M 56/78 71.8% 79/94230402 0.0% 1/78 1.3% 101090466 89124089 +3592 chr4 + 190214555 147766566 147766565 147766638 73 GTGTGTGTGTATATATACACATACATATATGTATGTGTGTATATGTGTATGTATACACATATATATACGTATA chr4 - 94230402 37363041 37363040 37363112 56867291 56867290 56867362 72 GTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA ....:::.::x.:....:....:..:.x..:...xx..................x....:.:.-...:..... 63M1D9M 54/72 75.0% 72/94230402 0.0% 1/72 1.4% 110403525 79811030 +3185 chr4 + 190214555 147793136 147793135 147793225 90 TGGAAAAAAAGAAAATGTGTGTGTATGTATGTGTGTGTGTGTGTGCATATATGTGTGTGTGTGTGTATATGTGTGTATATATGTATATAT chr4 - 94230402 39267125 39267124 39267207 54963196 54963195 54963278 83 TGTAAAGAAAGAA-------TTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATAT ..x...:......-------x.x::.:..x:.......:..x.:...::.:xx...........:....x.....:..x.:.:.:x.... 13M7D70M 58/83 69.9% 83/94230402 0.0% 7/83 8.4% 108526011 81688544 +3083 chr4 + 190214555 147793181 147793180 147793247 67 CATATATGTGTGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTGTGTATATATATGTAT chr4 - 94230402 48414295 48414294 48414361 45816042 45816041 45816108 67 CGTGCATGTGTGCTTTTGTGTTAATAATTGTATAGATGTATGTGTGGGTGTATGCATGTACACGTAT .:.::.......:x.x.....xx..:xx......x......:.:..x....:..:..:..:.:.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 99378886 90835669 +3383 chr4 + 190214555 147793191 147793190 147793244 54 TGTGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTGTGTATATATATG chr4 - 94230402 70982629 70982628 70982682 23247721 23247720 23247774 54 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG .............:.....::....:.x:...x.........::..:.:.:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 76810562 NA +3560 chr4 + 190214555 147793193 147793192 147793273 81 TGTGTGTGTATATGTGTGTATATATGTATATATGTGTGTGTGTATATATATGT---------ATGGTAGGTGTTTCAGTTCACAAAATAC chr4 - 94230402 70982629 70982628 70982718 23247685 23247684 23247774 90 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTGGATTGTTCAGCTTACCAAGCAC .........:..........:......x:...x:........:...:.:.::.---------..xx.:.:.xx.....:.:..x..::.. 53M9I28M 59/81 72.8% 90/94230402 0.0% 9/81 11.1% 76810564 NA +3850 chr4 + 190214555 147803084 147803083 147803166 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATGCTCATGCCTCAGCCTCTCAAGTAACTGGGATTACAGGTGTGCACCACAATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........:.x.x.x..x.x........:.......:....:.:....--:.........x:.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 129605958 60608597 +3374 chr4 + 190214555 147856928 147856927 147857009 82 CTGCAACCTCCGCCTCTGGGGTTCAAGTGATTCTCACGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:..:..:xx:x..::x...........x...x..x.x........::::.........:.:....x...-----...... 71M5D6M 56/77 72.7% 77/94230402 0.0% 5/77 6.5% 129659802 60554753 +3394 chr4 + 190214555 147857536 147857535 147857624 89 TTTTTTTTTATTTGTAGGAAGAAAAAAAGAAGTTTGACAAAGAGACAGAAAAGAATTATAGTCTAATTGATAAACATTTGAATTTATCA chr4 - 94230402 49982900 49982899 49982987 44247416 44247415 44247503 88 TTCTTCAATATTTGCAGGAAGAAAAAAAGCAAAAAAACAAAAACACAGGAAAGAACTACATCCTATTCCAT-AATATTAGAGCCTACCA ..:..:xx......:..............x.:xxx:.....:.x....:......:..:.x:...x.:x..-..:...x..:::..:.. 71M1D17M 61/88 69.3% 88/94230402 0.0% 1/88 1.1% 97874636 92339919 +4296 chr4 + 190214555 147857539 147857538 147857658 120 TTTTTTATTTGTAGGAAGAAAAAAAGAAGTTTGACAAAGAGACAGAAAAGAATTATAGTCTAATTGATAAACATTTGAATTTATCAGCAAAAAAGAAAGACTCACATTTACAAGAGGTAT chr4 - 94230402 93742818 93742817 93742937 487466 487465 487585 120 TCTTGCATCTACAGGAAAGAAAGAAGAAGTTTGAGAAGGATGGCGAGAAGTTTTATTCCATGCTGGATCGTCATTTGCATCTCTCTTCTAAAAAGAAGGAGTCTCAGTTACAGGAGGTGT .:..x:..:.::.....::...:...........x..:..x:xx..:...xx....xx:x.:x.x...x:x......x..:.x..xx.x........:..x..x..x.....:.....:. 120M 80/120 66.7% 120/94230402 0.0% 0/120 0.0% 54114721 NA +3094 chr4 + 190214555 147870917 147870916 147870977 61 AAAACTACAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTT chr4 - 94230402 27486709 27486708 27486769 66743634 66743633 66743694 61 AAACCTGAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTT ...x..:x......xx..................:x..x...x....:x:...:.x.:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 120384208 69830347 +3009 chr4 + 190214555 147873662 147873661 147873712 51 ACAAAAAAACAAAAAACAAAACACACACACACACACACACACACACACACA chr4 - 94230402 52796038 52796037 52796088 41434315 41434314 41434365 51 ACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGACA ....x....x..:.:.x..........:...........x.:..x..x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 95077624 NA +3702 chr4 + 190214555 147881860 147881859 147881937 78 TGAAAGAATGTACCAAGAGGCATACTGACTCCATTGACAGAAGGTTTTGTTTTGACATAGAAGCTGCTGATCGGTAAG chr4 - 94230402 93747870 93747869 93747947 482456 482455 482533 78 TGAAATCCTGTGTAAGGAGAAAGACTGACTCAATAGATAAAAGGTTTTGTTTTGACATCGAAACTAATGAAAGGTGAG .....xxx...::x.:...:x.x........x..x..:.:..................x...:..:x...xx...:.. 78M 57/78 73.1% 78/94230402 0.0% 0/78 0.0% 54133990 NA +3571 chr4 + 190214555 147906635 147906634 147906724 90 CAGGCCTGGCGTTTCCTTGACCATGCAGGCATTTTCCGAAGAGGAAAGGAAGCAGTGGTTGGAAGCTCTGGGTGGAAAGGAAGCTGTAAG chr4 - 94230402 93748062 93748061 93748148 482255 482254 482341 87 CAGGTCTGGGA---CCATCACTCTGCAGGCACTCTCCGAAGCTAACCGAAGGCTGTGGATGGAAGCCATGGATGGAAAGGAGCCGGTGAG ....:....x:---..x.x..:x........:.:.......xx:.xx.:.:..x....x.......:x...:.........:x.x..:.. 11M3D76M 62/87 71.3% 87/94230402 0.0% 3/87 3.4% 54158573 NA +3677 chr4 + 190214555 147910924 147910923 147911078 155 CTTCTTACCCCTCTTCCTTCTTCCC----------TTCTCCCTCTCTCCTTTGTTCTTTTCTTCTTCTGACACCTTTTCTTCCTTCCTCCCTCCTCCTCTTCCTCCCTT-TTCTTTCCCTTTCCTCATTCCCTCCTCTCCCCTTTCTCTTTCCTTCTTTTCTCTTT chr4 - 94230402 45185582 45185581 45185743 49044660 49044659 49044821 162 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCA----CCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x..:.:.x.:....:......:----------....x.:..x:..:..:x..::....x.:..:::----.:.......:...:.:xx::..:.:...:...x...-x.x:...:.x:.x..::.::::::xx.:x...:.xx...:.:x............. 25M10I34M4D36M1I56M 93/151 61.6% 162/94230402 0.0% 15/151 9.9% 102725342 87489213 +3528 chr4 + 190214555 148031393 148031392 148031482 90 TAGGTA-GTATTATTATCCCTATTTTATAGTTCAGGAAACTGAGGCATAGAGAAGGCCA-ATAACTCACCCA------------CATCTGTGACAAAGCTAGGA chr4 - 94230402 80987851 80987850 80987954 13242449 13242448 13242552 104 TAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAGGTGAGTCAGTGGCAGAGCTGGGA ......-...x..x.............:..x.x:..............x::::....:.-:.:...::....------------x:..x...:..:....:... 6M1I52M1I12M12I20M 68/90 75.6% 104/94230402 0.0% 14/90 15.6% 67043542 NA +3172 chr4 + 190214555 148031399 148031398 148031536 138 GTATTATTATCCCTATTTTATAGTTCAGGAAACTGAGGCATAGAGAAGGCCAATAAC---------TCACCCA------CATCTGTGACAAAGCTAGGATGGAACCCAGGCAGTCTGATTCCAGGGTCTGGGTTCTTAATCACTCTACTAGAG chr4 - 94230402 73089446 73089445 73089592 21140811 21140810 21140957 147 GCATTAATGTCCCTGTTTTGTAGATCAGGAAAATGAGGCACAGTGAGGTAAAATAACACTCAGAAGCCACCCAGCAAGTCCTCTGC-----AGTCATGAAAAGAAGCATATTTTTTGACTCCAGGTTTTATGCT-TTCATCACTAGACCACAG .:....x.:.....:....:...x........x.......:..x..:.xxx......---------:......------.x....:-----..::.x..x:::.xx..x::xx.:...:......x.:.:x.:.-..x......xx..:.x.. 57M9I7M6I7M5D43M1D18M 90/132 68.2% 147/94230402 0.0% 21/132 15.9% 74941953 NA +3268 chr4 + 190214555 148049796 148049795 148049851 56 TTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGGGGCGGGG chr4 - 94230402 37468555 37468554 37468609 56761794 56761793 56761848 55 TTTTTTTTGTTT-TTTGTGGGTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGAAGG ............-.....xx....x...........x.......x......x::.. 12M1D43M 47/55 85.5% 55/94230402 0.0% 1/55 1.8% 110581241 79633314 +3082 chr4 + 190214555 148049801 148049800 148049844 44 TTTGTTTGTTTGTTTGTTTGTTTTTTTTGGGTGGGGGGGCGGGG chr4 - 94230402 79128227 79128226 79128270 15102133 15102132 15102176 44 TTTTTTTGTTTGTTTGGCTGTTTTTTTTGGGGGGGGGGGGGGAG ...x............x:.............x.......x..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 68921574 NA +3292 chr4 + 190214555 148071609 148071608 148071655 47 CCCTCTCAGGAAGAAAACAAACAAACAAACAAAAAAAAACACAAAAA chr4 - 94230402 4915769 4915768 4915815 89314588 89314587 89314634 47 CCCTCACAAAAACAAAACAAACAAACAAACAAAAAAAAACCCAACAA .....x..::..x...........................x...x.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 143155840 47058715 +3410 chr4 + 190214555 148071611 148071610 148071654 44 CTCTCAGGAAGAAAACAAACAAACAAACAAAAAAAAACACAAAA chr4 - 94230402 57730988 57730987 57731031 36499372 36499371 36499415 44 CTCTCAGGGGAAAAACAAACAAACAAACAAAACAAAGCACAAAA ........:::.....................x...:....... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 90340623 NA +3085 chr4 + 190214555 148071614 148071613 148071656 43 TCAGGAAGAAAACAAACAAACAAACAAAAAAAAACACAAAAAG chr4 - 94230402 20249290 20249289 20249332 73981071 73981070 73981113 43 TCAGGGAAAAAACAAACAAACAAACAAAAAAAAGCAGAGCAAG .....:.:.........................:..x.:x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 127822324 62392231 +3742 chr4 + 190214555 148081344 148081343 148081456 113 TCACTTCCGGTGGAAGTAGAGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTGGTCGCTGATGATCTCCACCAGCATTGCGGGGAACTCTACCTTCAGCGCATGGGACT chr4 - 94230402 93772106 93772105 93772218 458185 458184 458297 113 TCACTCCGCGTGGAAGTAAATGGGTTTCACTTTTCCAGACAGGATCTTGGGAACCTGCACAGAGATGATCTCGGCCATCATTTCCGGGTAGTCCACGCTCACCATGTGGGCCT .....:.xx.........:.xx..:..x:.x..:..x...xxx.:......x.x...xx.:xx.........x:...x....x.x...x.x..:..x:...x.:::....x.. 113M 75/113 66.4% 113/94230402 0.0% 0/113 0.0% 54309238 NA +3713 chr4 + 190214555 148097638 148097637 148097736 99 TGTCCAACCCATGGCCCACGGGCTGTATGTGGCCCAGGACGGCTTTGAATGCGGCCCAACACAAATTCATAAACTTTCTTAAAACATGATGAGACTTTT chr4 - 94230402 75796544 75796543 75796639 18433764 18433763 18433859 96 TATCCAACCCAGGGCCCACGAGCTGCATGCAGCCCTAGACAGCCAGTAATGTGACCC--CACAAGGTCACACAC-TTCTAGCATTACTATGTGATTTTT .:.........x........:....:...::....x:...:..:xxx....:.:...--.....:x...:.x..-....x:x.x:.:x...x..:.... 57M2D15M1D24M 68/96 70.8% 96/94230402 0.0% 3/96 3.1% 72301094 NA +3068 chr4 + 190214555 148104286 148104285 148104361 76 GAAGATGTCCTTTTCAAAAAGAGTGAGATTTGTTTGTTTTTTTGTGTTTTGGTTTGGTTTTTTTTTTTTTTTTTTT chr4 - 94230402 75733712 75733711 75733787 18496616 18496615 18496691 76 GAAAAAGTTCCTTTCCAGCAGTATGGTGGTGGGTTTTTTTTTGTTGTTGTTGTTTGGTTTTTTTGGTTTTTTTTTT ...:.x..:.:....x.:x..x:..:x:x.x.x..x......xx....x.x.............xx.......... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 72370574 NA +3076 chr4 + 190214555 148104309 148104308 148104363 55 TGAGATTTGTTT------GTTTTTTTGTGTTTTGGTTTGGTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 54772357 54772356 54772417 39457986 39457985 39458046 61 TAAAACTTGTTCCCAGAGGTTTTGTTGGGTTTTGGTTTGGGTTTTTTTTTTTGTTTCTTTG .:.:.:.....:------.....x...x............x...........x...:.... 12M6I43M 46/55 83.6% 61/94230402 0.0% 6/55 10.9% 93331952 NA +3070 chr4 + 190214555 148104323 148104322 148104362 40 TTTTTTGTGTTTTGGTTTGGTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 76372541 76372540 76372580 17857823 17857822 17857862 40 TTTTTTTTGTTTTGGTTTGGTTTTTTTGGTTTTTTTTTTT ......x....................xx........... 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 71731782 NA +4584 chr4 + 190214555 148114099 148114098 148114264 166 CTCACGTCATGCATGGAGTCCAGCAGCTTGGTCAGTTGGTAGAACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTT---------AGTTACCATCTTCCTCAGTTCTTTGATGTAATTTGTCCTCATTTCTTCAAATGCAGCCTGGCTTTTGAGGCCATCCTTTGGAACTG chr4 - 94230402 93772631 93772630 93772796 457607 457606 457772 166 CTTACAGGATGCACGGAGTCCAGGACCTTGGTGAGCTGGTAAAACCGCCGAGAGC-------AGGA--GGTGGGGTTCTTCCTCTTGCAAGCAATGATCCGATCGAGTTCCTTAATGTAGTTCATGCGAAGTTCATCAAAGAGCTTCTGGTTCTTCAGGCCATCCACTGGAACTG ..:..:xx.....:.........x.x......x..:.....:....x.:.xx...-------..:.--.x....::x...---------..:x.:x...:xx::x.....:..:.....:..::.x.xx.x...x.....x:xxx:....:.:..x.........x:........ 55M7D4M2D12M9I86M 107/157 68.2% 166/94230402 0.0% 18/157 11.5% 54341468 NA +3096 chr4 + 190214555 148130781 148130780 148130844 64 GAACACGTTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 31390425 31390424 31390488 62839915 62839914 62839978 64 GAGTGCATTTTCTTTGGTATTTTGTATTTGTTTGTTTTGGTGGTTTTTTTGTTTGTTTTTTGAG ..:::.:....:...xx.:......x..xx.........x.xx.......x...x......... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 116740356 73474199 +3061 chr4 + 190214555 148134606 148134605 148134667 62 AAGTGTTAGCTCCCTGTGATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50770950 50770949 50771011 43459392 43459391 43459453 62 AACTGGTGATTCACTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTT ..x..x.:::..x...:xx:..............xx...x.....x...x............ 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 97363656 92850899 +3237 chr4 + 190214555 148134619 148134618 148134675 57 CTGTGATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT-------TTTTTTTTAGAGGGAG chr4 - 94230402 18929907 18929906 18929970 75300433 75300432 75300496 64 CTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAAGTAG ...x:x..................:................-------...x.:.:...:.x.. 41M7I16M 48/57 84.2% 64/94230402 0.0% 7/57 12.3% 129204712 61009843 +3385 chr4 + 190214555 148134622 148134621 148134661 40 TGATTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929908 18929907 18929947 75300456 75300455 75300495 40 TGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...x.:.................................. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 129204714 61009841 +3095 chr4 + 190214555 148134628 148134627 148134663 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 129204716 61009839 +3820 chr4 + 190214555 148134724 148134723 148134806 83 CTGCAACCTGTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTAAGTAGCTGGGATTACAGGTGTGCGCCACCTTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..::x:x..:.:...........x...x.xx.x.........::..........:.:....--:....:....:x.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 129937598 60276957 +3316 chr4 + 190214555 148136055 148136054 148136119 65 TCAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAACACCACC-AAAACCAACAAAAAAAACAAACA chr4 - 94230402 70278315 70278314 70278380 23952023 23952022 23952088 66 TCAAAAGAAAAAGAAAAAAAACCAACAAAAAGAAACACCACCTGACACCAACCTATAAAATCACCA ......:.....:........x...x.....:..........-:.x......xx.x....:x.x.. 42M1I23M 52/65 80.0% 66/94230402 0.0% 1/65 1.5% 77857740 NA +3181 chr4 + 190214555 148136061 148136060 148136135 75 AAAAAAAAAAAAAAAACAAAAAAAAAAAACACCACCAAAACCAACAAAAAAAACAAACAAAAAAACTTTGTCCAG chr4 - 94230402 27903244 27903243 27903318 66327085 66327084 66327159 75 AAATAAAAAAACCAACCAACCAAGAAAACCACCACCATCACTAACAAAAAAAGCCTCTAAAAAAATTTACTGCAG ...x.......xx..x...xx..:....x........xx..:..........:.xxx:.......:..xx.x... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 120232817 69981738 +3428 chr4 + 190214555 148136068 148136067 148136130 63 AAAAAAAAACAAAAAAAAAAA-ACACCACCAAAACCAACAAAAAAAACAAACAAAAAAACTTTG chr4 - 94230402 38842326 38842325 38842389 55388014 55388013 55388077 64 AAAACAAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACAGACAAACAAAAAAACCTTG ....x...............:-:x.x..x...x.x........x.:..............:... 21M1I42M 52/63 82.5% 64/94230402 0.0% 1/63 1.6% 109293742 80920813 +6165 chr4 + 190214555 148152460 148152459 148152640 181 GGTACTTACTCATTAAAGACTAGGTCTGGTGCAAAATAGAGAAATTGGCTGTTCGTATGTTTGTACGATCTCCAGCTCAAGGCAAATGATGATAGACACATCCAAGAATACTGGATTAGGGTAATTTGGTCCTCAAGAGGCAAGTTTTTAAATCCTG---AAGAACAAAACAATTAATCACAGA chr4 - 94230402 93773845 93773844 93774028 456375 456374 456558 184 GGCACTTACTCGTTGAAGACCAAATCTGGGGCAAAGTAAAGCATCCTGGAATTGACGTTAGTGAAAGATCTCCAACCCATGGCAAAAATCATGAGACCCATCCAAGAATACTGGATTATTGACATCTGGTCATCCACATGCAAATTGCGAAATCCTGTTCAAAAGAGAAGCAAAAGACAGCAGA ..:........:..:.....:.::.....x.....:..:..x.x::x.xx:..x:::.xxx..x.x........:.:..x......x:x::xx....x....................xx.xx..:.....x..x.x.x....:..x:x........---..:.:x:..:...xx:.:x:.... 157M3I24M 120/181 66.3% 184/94230402 0.0% 3/181 1.7% 54378615 NA +3153 chr4 + 190214555 148188889 148188888 148188955 67 TACATTAAG--GTATATACCTTGTATGCCGATTTTGCTGAGTTTTTTTTTTTTTTTTTTGAGATGGAAT chr4 - 94230402 24905220 24905219 24905288 69325115 69325114 69325183 69 TACATTCAACTGTATAGACCTGGAGTGCTGATTCCACTGATTTTTTTTTTTTTTTTTCCAGGGTGCAAT ......x.:--.....x....x.x:...:....:::....x................::::.:..x... 9M2I58M 50/67 74.6% 69/94230402 0.0% 2/67 3.0% 123283669 66930886 +3025 chr4 + 190214555 148204872 148204871 148204936 65 ATACCTCTAAACTCCAGACCTGGAAGCCAACATATGCACAGCCCTTGCAAGAATTTAAAAATCCT chr4 - 94230402 26778989 26778988 26779053 67451350 67451349 67451414 65 ACAACTCTAGGGTCCAGACCTACAAGCCAACAGACATGTAGCTCTTGCACAGATTTCAAAAGCTT .:.x.....::x.........:x.........x.:::::...:......x::....x....x.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 121425883 68788672 +3487 chr4 + 190214555 148209355 148209354 148209431 77 CTGTAGCCTCAACCTTCTGGGCTCAAGCAATGCTGCTGCCTCAGCCTCTTGAGTAGCTAGAACTGCAGGTACACAAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..::....:x..x........:.....::x.x.xxxx.x........:.::.......:.....:..x..:...x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 130012229 60202326 +3438 chr4 + 190214555 148220162 148220161 148220240 79 CTGCAGTCTCAAACTACTGGGTTCACGTGATCCTCCCACCTCAGCCTCCCAAGTAACTGAGACCACAGGCACGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:...:.:x..:..x.........x...x.:.x.xx:x........::......:...::..:...--.::....... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 130023036 60191519 +5815 chr4 + 190214555 148259974 148259973 148260081 108 TTACCTTCCACTGCTCTTTTGAAGAAAACTTTGCAGCTGCCACAGGTGACTACCCCATAATGGCATCCTGAAGCCTCATCCCCACACACCAAACATATTTTTGAAGGT chr4 - 94230402 93792876 93792875 93792983 437420 437419 437527 108 TTACCTTCAGCCGCCCGCTTGAAGAACACTTTGCAGCTCCCGCAGGTGAGGGCTCCATAGTGGCACCCGGATGCCTCATCGCCGCAGATCAGACACGTCTTCTGAGGT ........x:.:..:.x:........x...........x..:.......xx:.:.....:.....:..x..x........x..:..x.:..:...::.:..:x:.... 108M 80/108 74.1% 108/94230402 0.0% 0/108 0.0% 54467098 NA +3102 chr4 + 190214555 148274638 148274637 148274722 85 CAGAACTGTGAG--TAGATTAAGTCTGCTTAATGGACTCAGTCAATTATCCAGTCTCAGGTAGTTTTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 87492002 87492001 87492088 6738315 6738314 6738401 87 CAGAACAATAAAAATAATTTAATACTGTTTAATGTACCAGAGAAATTATATAATTCTGGATACTTTTTCCTATTTTTTTTTTTTTTT ......x:.:.:--..:x....xx...:......x..:x::xx......x:.:.::::.:..x.....:..x............... 12M2I73M 58/85 68.2% 87/94230402 0.0% 2/85 2.4% 60782636 NA +3086 chr4 + 190214555 148285697 148285696 148285829 133 CTCTGTCTCAAAAAAAACAAAAACAAACAAACAAAAAAAACTTCCT------------------------CCATTGGCACACAATGCAACT--GCTTCCCTGTCTTGTACATGTGGAGATGTGATAAAGTAACTTCAGTGACAGTCAAATGTACTGTTA chr4 - 94230402 28462986 28462985 28463138 65767265 65767264 65767417 153 CTTTGCTTTAAAAAAAACAAAAACAAACAAAAAAAAAACACCTCTCTGTCTGCATTTGTGTTAACATCAGCCACTAACACAGGAAGTTACTTCACTTCGCTGTCTTCTTTCCTC-----TTTAATAAATACACCTCTGAGACAGTGGAA-GTACTATCA ..:..::.:......................x......x..:..::------------------------...:.::....x:.x.:x...--:....x.......x.x:x:x:-----.x.:.....xxx..:..x.x......x:..-.....:.:. 46M24I21M2I21M5D30M1D9M 89/127 70.1% 153/94230402 0.0% 32/127 25.2% 119822711 70391844 +3063 chr4 + 190214555 148316766 148316765 148316811 46 TCCATTAGTTGTTTTTTCTTTTTTGTTGTTGTTGTTGTTTTTTGTT chr4 - 94230402 76612839 76612838 76612884 17617519 17617518 17617564 46 TTCATGTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGGTTTTCTTT .:...xx..........:...................x....:x.. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 71703927 NA +3111 chr4 + 190214555 148316772 148316771 148316817 46 AGTTGTTTTTTCTTTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTT chr4 - 94230402 72014458 72014457 72014503 22215900 22215899 22215945 46 AGTGGTTCTTACTGTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTT ...x...:..x..x....x..............x............ 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 76302314 NA +3200 chr4 + 190214555 148316774 148316773 148316816 43 TTGTTTTTTCTTTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTT chr4 - 94230402 17488391 17488390 17488433 76741970 76741969 76742012 43 TTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTT ......xx::..................:.............. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 130828383 59386172 +3113 chr4 + 190214555 148316785 148316784 148316820 36 TTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTTCTG chr4 - 94230402 5728855 5728854 5728890 88501513 88501512 88501548 36 TTTTTGTTGTTGTTGTTGTTCTTTGCTTGTTTTCTG ....................:....:.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 142587930 47626625 +3735 chr4 + 190214555 148317300 148317299 148317434 135 AGCTGAGATCGCACCATTGCACTTGAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAAAAAAAAAAGAAAAAAAGAAAAAAAAGAAAAAAGAA--AAAAGA-------------CTACCTTAAAATTTTTTAGCTATAAAAATTAAGAC chr4 - 94230402 61919665 61919664 61919809 32310594 32310593 32310738 145 AGCTGAGAACACAATAAAACAATTGGTACAGGGAGAAGAGAAAAAAAAAATGTCTCCAAAAGAAAAAGAAAAATGGAGGGAAAAAAAAATAGAATCAAAGGAAACCAATTCATTGCTACCCTGGAATCGTTTG-----AGAAATCCAGAC ........x.:..x:.xx:..x...:xx.x...x:.x:...:x....xxx......x....:...........x:..:::....:....x....--...:..-------------.....:.::...:x...:-----.:....:x.... 94M2I6M13I18M5D12M 90/130 69.2% 145/94230402 0.0% 20/130 15.4% 86397635 NA +3048 chr4 + 190214555 148317343 148317342 148317407 65 AAAACTCTGTCTCAAAAAAAAAAAGAAAAAAAGAAAAAAAAGAAAAAAGAAAAAAGACTACCTTA chr4 - 94230402 61513091 61513090 61513155 32717248 32717247 32717312 65 AGGACTGTTTCTCACGGAGAGAGAGAGAAAAGGAAAAAAAAAAAAAAAGCAAAATGTGTGCTTTA .::...x.x.....x::.:.:.:...:....:.........:.......x....x.xx.:.:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 86804252 NA +3231 chr4 + 190214555 148373550 148373549 148373632 83 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTATCCAGCCTCAGCCTTCCAAGTTGCTGGAGCTACAGGCACGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::........:.x..xx.x:.x.........:.....x......:.....--.::.::....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 130176424 60038131 +3182 chr4 + 190214555 148375454 148375453 148375563 110 TCAAAGAAAGAAAAAAAAAAAA----ACCCTGCAAAATTTAAAGTATTTGACAAGATGGTATTTATATCAAAAATTTAAAATATATTTGACAAGATGGTATTTACATCAAAAAT chr4 - 94230402 65386818 65386817 65386931 28843472 28843471 28843585 114 TCAAAGCGAGAAAAAAAAAAATTAATAACCTTCTCCACTCAAAGCTCTTAGTTAAGTGACAAGTATTTTGAAAATTTGAAATACATTTGCCAAAAGTGTCTGTTTATTTAAAGT ......x:.............x----.x...x.xxx.:.:....:x:..:::x.::..::.xx...x.::.......:.....:.....x...:.xx..x.x.x:..:x...:. 22M4I88M 71/110 64.5% 114/94230402 0.0% 4/110 3.6% 82988636 NA +3094 chr4 + 190214555 148406147 148406146 148406212 66 GAGAGGGAGACTGTCTCAAAACAAAAAAACAAACAAACAAAAAAAGTGAACAAGAGGGTAACAGCA chr4 - 94230402 84131219 84131218 84131284 10099119 10099118 10099184 66 GAGAGGAAGACTGTTTTTATGATTAAAAACAAACAAACAAAAAACACAAAAAAAACAACAACAGCA ......:.......:.:x.x:xxx....................x:::..x..:.x:::....... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 64274928 NA +4155 chr4 + 190214555 148416380 148416379 148416487 108 AACTAACTCAGTCCTTATAACAATACTGT----TTGGTACATTCTATCATCTCCATTTTACAGATGAGAACACTGAGGCACCAAAAGGTTAATAAATAATTTGCCTAAGATC chr4 - 94230402 10729155 10729154 10729262 83501141 83501140 83501248 108 AATTGATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGT---TAAGTAATTTGCCCAGAGTC ..:.:.:.:..-...:.:..:.x:x....----.x....xx.x......x.............:..:...x..........xx.x....---...:.........:.:::.. 11M1D17M4I56M3D20M 78/104 75.0% 108/94230402 0.0% 8/104 7.7% 137687225 52527330 +3220 chr4 + 190214555 148443206 148443205 148443308 103 CTTAGACCCCTAACACCAAAAA-----AAAAAAA---------AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAATGAAAGAAGTGGCAGGGTCAAGAGCTGCTCCTCT chr4 - 94230402 37322350 37322349 37322466 56907937 56907936 56908053 117 CTTAAATACATAACAGTAATAAGGTGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGACTTGACCACTGACTGACCCTCT ....:.:x.x.....x:..x..-----..:....---------.....:........................::.x.:x::.x.....::xx.:.xx.::..xx::...x:..... 22M5I7M9I74M 71/103 68.9% 117/94230402 0.0% 14/103 13.6% 111120856 79093699 +3031 chr4 + 190214555 148443222 148443221 148443286 65 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAATGAAAGAAGTGG chr4 - 94230402 91846558 91846557 91846622 2383781 2383780 2383845 65 CAAGGGAAAGGAAAAAAAAAAAAAACAAAAGAAGAAGGAACAAGACAGTCAAGTAAACTAAATGG ...:::...::..............x....:....::..:x:...x..x:..:.:..xx..:... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 56596664 NA +3274 chr4 + 190214555 148443222 148443221 148443278 57 CAAAAAAAAAAAA-----------------AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAATGAA chr4 - 94230402 94076865 94076864 94076938 153465 153464 153538 74 CAAAAAAAAAAAATAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAA .............-----------------..x..x..x.........:.............:........x.. 13M17I44M 51/57 89.5% 74/94230402 0.0% 17/57 29.8% 54366357 NA +3132 chr4 + 190214555 148443239 148443238 148443278 40 AAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAATGAA chr4 - 94230402 76845959 76845958 76845998 17384405 17384404 17384444 40 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAA ............................:...:x...:.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 71597280 NA +3248 chr4 + 190214555 148443240 148443239 148443274 35 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAA chr4 - 94230402 25247412 25247411 25247446 68982957 68982956 68982991 35 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAA ................................... 35M 35/35 100.0% 35/94230402 0.0% 0/35 0.0% 123195828 67018727 +3089 chr4 + 190214555 148446963 148446962 148447033 71 TCCATTTTA--TACATACACACACACACACACACATACACACACACACACAAACTGTTCTCAAATTTTCATCT chr4 - 94230402 87993741 87993740 87993813 6236590 6236589 6236662 73 TCCACTCCAGGTGTATATACCTGGACACACACACAGGCACACACACAGGCAAAGTGTTGTTAAGTTTCCCTCT ....:.::.--.::...:..x::x...........x:..........x:....x....x.:..:...:.x... 9M2I62M 51/71 71.8% 73/94230402 0.0% 2/71 2.8% 60453222 NA +3969 chr4 + 190214555 148455769 148455768 148455937 169 TTCCTTCCCTCCCTCCCTCCCTCTCTCTTTCTTTCTCTTTCTTTCATTCTTTCTTTCTTTTTCTCCTCTTTCTTTCTTTTTCTTTCTTTCTCTTCTCTCCTTCCTTCCTTCCTCCCTCCCTCCATCCCTCCTTCT---CTCCTCTCCTCTCCTATTCTCTTTTCGTT--TCTTT chr4 - 94230402 45185586 45185585 45185750 49044653 49044652 49044817 165 TTGCTCATTTTCCCTCTTCCTAGTCTCAGT-TTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTC-------TTCTTTCTTTAAC-TCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..:x::.:..::.:...:xx....xx.-.....x:...x...x......::..::x...:..x:.....-------..........xx.-...::....:..:x...xx.x.:..:.x.:.:::x..:....---.x..:..xx....:......:..:..x..--..... 30M1D41M7D13M1D42M3I29M2I5M 107/160 66.9% 165/94230402 0.0% 14/160 8.8% 103270183 86944372 +3023 chr4 + 190214555 148455791 148455790 148455862 72 CTCTCTTTCTTTCTCTTTCTTTCATTCTTTCTTTCTTTTTCTCCTCTTTCTTTCTTTTTCTTTCTTTCTCTT chr4 - 94230402 90844561 90844560 90844632 3385771 3385770 3385842 72 CTCTCTTGCTTTCAGTTTCTTTCTCAGTGTTTTCTTTTCTTCCCTCTTTCTGTTTTGTCCACTCTATCTCCT .......x.....xx........x:xx.x.:..::...:.::.........x.:..x.:.x:...x....:. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 57611230 NA +3361 chr4 + 190214555 148455840 148455839 148455972 133 CTTTCTTTTTC----TTTCTTTCTCTTCTCTCCTTCCTTCCTTCCTCCCTCCCTCCATCCCTCC--------TTCTCTCCTCTCCTCTCCTATTCTCTTTTCGTTTCTTTGGTTTTCTTTTTTTCACTCCTTGCAGAACTCAGTC chr4 - 94230402 69007379 69007378 69007522 25222881 25222880 25223024 144 CTTTACTTTTCAAAACTCCATTCTTTTCAATC-TTCTTTTTTTCATCCTTTCCTAAGTCTTTTTGGTGTGTTTCTTCTTTTCTCTTTTCCTGTTCTCATTATGACTCTCAGGTTGGTTTTTTTTGACTTTTTCCATAGTTAATTC ....x:.....----:.:.x....:...xx..-...:..::...x...:.:...xx:..::.::--------.::...::....:.:....:.....x..x:.x:...:x....xx:.......x...::..x..x.::.x.x.. 11M4I17M1D31M8I73M 85/132 64.4% 144/94230402 0.0% 13/132 9.8% 79448461 NA +4317 chr4 + 190214555 148528749 148528748 148528907 159 GAAAAAAAGATAAAGAA--AGAAAGAGAGAGAAAGAG-----AGAGGCAGAGAGAGAGAGAAAACAGAAGGAAAGAAGGAAGGAAATTTGGAAAGAAAAGATAATAAATGAAAGGAGAATAAAAGACAAGAAAAAGAAAAGGAAGAACGAAGGGAAAATAAATTAG chr4 - 94230402 46219594 46219593 46219759 48010644 48010643 48010809 166 GACAGAATGATGAAGTATCAGCAGGCAAAAGAAACAGCTATGAGAAGGAGACAGAGAATGAAAACAGAGGGAAAGGCACTAGGAAAGTTGGGAAGGGAAAATATGAATTTAGTAAAAAAAAAAATCCACGTGAAGGAGAAAGACAAAAAAAATGGAGGTACAGCAG ..x.:..x...:...x.--..x.:.x:.:.....x..-----...:.x...x.....:x.........:......:x:xx......x....:...::..:...xx..x.x.:x::.:..x....xx..x.x:..:..:..:..x:..x:..:x.:.::..x.x:.. 17M2I18M5I124M 102/159 64.2% 166/94230402 0.0% 7/159 4.4% 102309155 87905400 +3286 chr4 + 190214555 148535296 148535295 148535341 46 TGTGTGGTGTTTTTTGTTGATGTTGTTGTTTTCTGTTTGTTTGTTT chr4 - 94230402 17488392 17488391 17488437 76741966 76741965 76742011 46 TGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT ...x...:x..........x.......:....:............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 131046904 59167651 +3459 chr4 + 190214555 148535297 148535296 148535352 56 GTGTGGTGTTTTTTGTTGATGTTGTTGTTTTCTGTTTGTTTGTTTTTCTTTTAATA chr4 - 94230402 66916760 66916759 66916815 27313588 27313587 27313643 56 GCATGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTCATAATA .::....x..........x..................x..xx....:..:x..... 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 81618537 NA +3166 chr4 + 190214555 148622767 148622766 148622875 109 GAAAAAAAAAAAAAGAAAAAGCAAAAAAAGAAAAAGAAGGAAACACACACAAAAAAACAAAAAGACAAAATACAAAGTAG----------------CTGAATGGGTTAAAAAAAAAAAGATCCAA chr4 - 94230402 65573519 65573518 65573643 28656760 28656759 28656884 125 GGAAACAGAAAACAAAGACAACAACGCACCAAAGCAGAGCAAATAAAGAAAGAAAAACTAAAAGAAAAAACACAAAGTAGCATTCTATTAAGATCTCTGAACTGTTTTAAAAAGTAGAGCACCAA .:...x.:....x.:.:.x.:...x:x.xx...:x::..x...:.x.x.x.:......x......x....:.........----------------.....:x.x..x.....:x.:..xx.... 80M16I29M 74/109 67.9% 125/94230402 0.0% 16/109 14.7% 83049248 NA +3319 chr4 + 190214555 148659161 148659160 148659250 90 TGGCATGATCTTGGCTCACTGCAACTTTTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCTAGTAGCTGGGATTATAGGTGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......x..x..------..:..:.::xx:x..:...........::x...x.xx.x........:..x.........:.:..:.x.... 12M6D72M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% 130462047 59752508 +3804 chr4 + 190214555 148668656 148668655 148668788 133 TTATTTTGTTGGGAAAACATATAAAATAGTTGAATAATCTAAATCAGGAGTTTCCAATCTTTTGACTTCCCTAGGCTACATTGGAAGAAGAAGAAATGTCTTGGGCCACACATAAAA----TACACTAAGACTAATG chr4 - 94230402 9885822 9885821 9885949 84344454 84344453 84344581 128 TTATGTTGTGGTGAAGAAAC---------TTGATTGCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg ....x....x.x...:.x.:---------....x.:x.:x..x......x.x.....:...:..x.......::..:...x..::x...x.:...x.::..x....::..:x...:.----.:.x..:.:.x..... 20M9D88M4I16M 84/124 67.7% 128/94230402 0.0% 13/124 10.5% 138782834 51431721 +3121 chr4 + 190214555 148683195 148683194 148683267 73 AACAGGTCCCTTTCCTTCTCTCTGATTCCAATTTTTTTTTTTTTTTTTTTTTGAGATGCAGTCTCACTCTGTC chr4 - 94230402 22319641 22319640 22319710 71910693 71910692 71910762 70 AGCAGCTTCTTCACTGTCTCTTAAATTGTGATTTTCTTTTTTTTTTTTTTTTGAGGTCTAGTTT---TCTGTC .:...x.:.:.:x.:x.....:x:...x::.....:...................:.x:...:.---...... 64M3D6M 51/70 72.9% 70/94230402 0.0% 3/70 4.3% 126363554 63851001 +3177 chr4 + 190214555 148687088 148687087 148687179 92 CACACCTAAGTGTGTGTGTGTGTGTGTGTGTGTATACTGTGTCTATGTGTGTGTGTGTATATATATAGTGTATATAAATATACATAGTTTGT chr4 - 94230402 6900832 6900831 6900914 87329489 87329488 87329571 83 CAGACTTAAATTTATATGTGTGTGTATGTATGTACACTG---CTA---GTATACGTGTATATATATA---CATTTCAATATGCTGGGATTGT ..x..:...:.x.:.:.........:...:....:....---...---..:.::.............---:..x.x.....:.xx:.x.... 39M3D3M3D19M3D22M 63/83 75.9% 83/94230402 0.0% 9/83 10.8% 141786256 48428299 +3246 chr4 + 190214555 148696497 148696496 148696572 76 AGGAAAAGTATGTGTGTGTCTATACATATATACATATATATACACATATATGTATAGACACACACACACACACAGA chr4 - 94230402 8395783 8395782 8395858 85834545 85834544 85834620 76 AGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGA ...xx.x..:...:.....x:...x.:..:..:x..:....::.:::x..::.xx.x................... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 140300714 49913841 +3339 chr4 + 190214555 148696504 148696503 148696568 65 GTATGTGTGTGTCTATACATATATACATATATATACACATATATGTATAGACACACACACACACA chr4 - 94230402 8395792 8395791 8395856 85834547 85834546 85834611 65 GTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ..:.:......:x..x....:...x:.:....:..::.x..:..xx...x............... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 140300712 49913843 +3176 chr4 + 190214555 148752392 148752391 148752504 113 TATAGCCTTTCTGTGGATAAATCTGTATCAGATTTGATTCACACAAGGGCAACAAAGCAAATGTCAAAATGGAGTTATGAGAGTGGAAGAAAAGGGAGGAAAAAAGAAGGAAA chr4 - 94230402 25605739 25605738 25605851 68624552 68624551 68624664 113 TATTGTTCCTCTCTTTATATATGTACAACATACGTTATTAATTTAATGGTAAATAAACAGAAGTGAAAATGAAGGTAGGAAAATGGAAATGAAGGTAGGAAAATGGAAATGAA ...x.::::...x.xx...x..x.::.x..x.:x.x...x.:x:..x..:..xx..:..:.x..x......:..x..x..:.:.....:x:....x.......x:...:x:.. 113M 70/113 61.9% 113/94230402 0.0% 0/113 0.0% 123146653 67067902 +3536 chr4 + 190214555 148754988 148754987 148755113 126 ATCACTTCCTATTCCTACA--ACCACCAAAAAT--------AGAGTTCCCTTCCAGAGATTTTGTGTCTTAATGCTTTATCCAAACCAAACTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTTTTCTTTCTTTC chr4 - 94230402 15913221 15913220 15913349 78317054 78317053 78317182 129 ATCACTTCATAGTACCATAGTACCATGCAGTATCAGCACTGAGACCTCCCTTCAACA---CCTCTGTCTTTAAG----ATGCACACCAAGCCTTCTTTGTGCATTTTTCTTTTTCTCTCTTTCTTTTTTTTCCCTC ........x..x.x.:.:.--....:xx.:x..--------...x:.......x.x.---::.x......x.x.----..x..x.....:.:......x.x:x.......:.....:..........:....::.. 19M2I12M8I16M3D14M4D58M 87/119 73.1% 129/94230402 0.0% 17/119 14.3% 132841767 57372788 +3499 chr4 + 190214555 148755019 148755018 148755113 95 AGAGTTCCCTTCCAGAGATTTTGTGTCTTAATGCTTTATCCAAACCAAACTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTTTTCTTTCTTTC chr4 - 94230402 15914129 15914128 15914216 78316187 78316186 78316274 88 AGACCTCCCTTCAACA---CCTCTGTCTTTAAG----ATGCACACCAAGCCTTCTTTGTGCATTTTTCTTTTTCTCTCTTTCTTTTTTTTCCCTC ...x:.......x.x.---::.x......x.x.----..x..x.....:.:......x.x:x.......:.....:..........:....::.. 16M3D14M4D58M 66/88 75.0% 88/94230402 0.0% 7/88 8.0% 132840890 57373665 +4318 chr4 + 190214555 148755036 148755035 148755251 216 ATTTTGTGTCTTAATGCTTTATCCAAACCAAACTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTTTTCTTTCTTTCT---TTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTC---TCTCTCTCTCTCTTT chr4 - 94230402 92912804 92912803 92913025 1317378 1317377 1317599 222 ATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTT ....:x.x..::x..xx...xx.:..:x..:...:..:..xx:...::..:..:x.:::xx.xx..x::...:......---.:.xxx.:.:.::::x...x:x:...:....:.:.:.:.:..xx..:x:..::x::.:..x..:.xx:.x......:::..:.......:.....:......xx..::x.:..x.:x..:.x---...:....:x..:.. 79M3I122M3I15M 122/216 56.5% 222/94230402 0.0% 6/216 2.8% 55842232 NA +5840 chr4 + 190214555 148755066 148755065 148755293 228 AACTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTTCTTTTCTTTCTTT-----------CTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 88451617 88451616 88451855 5778548 5778547 5778786 239 AACCTTTTTCCTTTCCCTTGTTTTTTTGATATTCATTAGCTTTTCTGTAATAGGTGTGCTTACTTCTCTCTCATTTCTGTCTTTCTCCATCCCTTCTCTTCTATTCTTATTTATTTATTTTTCCTTCAACCAGCATATGACCACCATTCTTTTTCCACATTTCATCTCTTCTCATAAATATTTCTTTCATCCTTTTTCATCCtttttttttttttttttttttttttttttcttACTCT ...:..:..:.....::..x:.:...:xx.x..:x..xx....::.x-----------...x...:...:..x.....x.......::x.::...:::....x.::..x...x..:x..:..:...:xx.:xx.x.x:xx..x:.x..::::....x.x.:.:x..:.:..::x:xxx.x.:...:..x::..:....x.:.::...:...:...:...:...:...:......x..:. 47M11I181M 136/228 59.6% 239/94230402 0.0% 11/228 4.8% 60303449 NA +4046 chr4 + 190214555 148755067 148755066 148755217 151 ACTTTCTTTCTTTCT--------TTTTCTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTT------CTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTT chr4 - 94230402 45185592 45185591 45185751 49044652 49044651 49044811 160 ATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATT-----TTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT .:....::....:..--------......x:...x................x..-----...:x::.:.:..........xx:....:.:..::.:x:..xx.x...:.:x..x::.x.....:.------.::.xx..::.:x...:....:...:xx:..:.. 15M8I31M5D66M6I34M 96/146 65.8% 160/94230402 0.0% 19/146 13.0% 103569475 86645080 +4624 chr4 + 190214555 148755070 148755069 148755233 164 TTCTTTCTTTCTTTTTCTCTTTCT---TTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTT chr4 - 94230402 45185583 45185582 45185743 49044660 49044659 49044820 161 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC------CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x..x..:x:...::.....:..---:..xx.:..:.x:...x................x...:.:x.:..::..........xx:....:.------:.....:x...xx.x:....:x..x.:.x:...:..xx..x::...xx...::.x::..::..:.... 24M3I66M6D68M 102/158 64.6% 161/94230402 0.0% 9/158 5.7% 103569487 86645068 +3166 chr4 + 190214555 148755089 148755088 148755160 72 TTTCTTTCTTTCTTTTCTTTCTTT----CTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ...:...:....:x..:.:...x.----x..:.:..x.x......:.::.:............::.:......x.. 24M4I48M 52/72 72.2% 76/94230402 0.0% 4/72 5.6% 92603539 NA +3128 chr4 + 190214555 148755092 148755091 148755172 81 CTTTCTTTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTT chr4 - 94230402 8141240 8141239 8141320 86089083 86089082 86089163 81 CCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .:...:x:....x..x...:........x.::x.:::::..x.....:...:...:..:.:.x.x:.:....::..:..:. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 140613852 49600703 +4141 chr4 + 190214555 148755098 148755097 148755341 244 TTCTTTTCTTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTC------TTTCTTT--CTTTCTTTCTTTCTTTCTT--TTTTCT---TTCTTTCTTTTTCTTTC-----TTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTC chr4 - 94230402 52305082 52305081 52305342 41925061 41925060 41925321 261 TCTTTTTCTGACTCTCACCCCCTTCATTTTTCTCTGATCCTCACAAAGTATCTTGGGCTCCCTTTAATCCTTTCTCAGTTTTCTGAACTCTATTTTGATCTTCCACCAGCTCCCTTGTGCCATTCCCATTCTG-TCATCTCCCCTAGAGAACATTTCTCTCTTGCTCTCATGCTTTCCCTCCGCCTTACTCTGTTATTCCTTCACTTTCACGTGATGTACCTGATTGTCTCCCTGTGTTTTTTTTTGTTTTTTTTTTCCTCC .::......xx..:..x::.::...x..:..:...xx:::..------.x....x--..::....xx.:......:--......---:...x.:..xx....:.-----:...:.:x.x..x.....x.:..x-..x........xxxxxx:x.:.......:x.....x.x........::x::.:x:...x.:x...:...x:.:.:x.x.xx.x.x::.xx..x.:..::.x.x.:...:...x...:..:......:. 42M6I7M2I19M2I6M3I17M5I24M1D128M 150/243 61.7% 261/94230402 0.0% 19/243 7.8% 96450016 93764539 +3072 chr4 + 190214555 148755119 148755118 148755203 85 TTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTT chr4 - 94230402 19053884 19053883 19053968 75176435 75176434 75176519 85 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTTTTTTTTTCTCTGCTTCATACTCT ..:...:...x..::..x..xx..::...x...:.::...::..xx.....x:...:.:......:.....::x:.:.x.x..:. 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 129701235 60513320 +3014 chr4 + 190214555 148755125 148755124 148755188 64 TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTC chr4 - 94230402 40193311 40193310 40193374 54037029 54037028 54037092 64 TCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCC ........:...:.x.:.:..x..::::xx.:...x:.:......:...:..........:.:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 108561814 81652741 +3042 chr4 + 190214555 148755144 148755143 148755206 63 TTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCC chr4 - 94230402 1305954 1305953 1306016 92924387 92924386 92924449 63 TTCTCTTCTTTGCTTTTCTCTTTGTTGTTTCTCCCTGATGCTTTCTTCCCTCCTGCTTTTCTC ..:::......x:..:.:.....x..x.....::..xx.x.........:....x.:....:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 147449190 42765365 +3009 chr4 + 190214555 148755162 148755161 148755231 70 TCTTTTTTCTTTCTTTCTTTTTCTTTCTTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCT chr4 - 94230402 54635348 54635347 54635417 39594986 39594985 39595055 70 TCTTTTTTCTTTTTCTTTTTTTTTCTCACCCCCTCCCCTCTCCCCTTGAATTTCTTTTCTCCTTTTGCCT ............:.:.:.....:.:..x:..:::.::.::.:.....xxx::....:..:...::.x... 70M 45/70 64.3% 70/94230402 0.0% 0/70 0.0% 94119814 NA +3709 chr4 + 190214555 148755189 148755188 148755355 167 TTCCTTCCTTCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTCTTTCCTTCTCTTTCTTTCTTTC chr4 - 94230402 63341442 63341441 63341609 30888794 30888793 30888961 168 TTGTTTCTGCCAGTTCCCTTCTAATCCTTCTCCACTCCTTCCATACTCTCACACCAGGTGCTTTTCTGCTTCTCTTACCTTGTTTACGTATCTTTTGTTCCTTGAACTACTTTTTTTCTGCATTCTCATTCTGTTTCTCTCATTCCTTTCACTCACTTTTGTTTGTCC ..x:...:x:.xx........:xx::.......x.....:..x.x.....x.x.:xxx.x:..:.:.x.:.:....x.:..x...x:x.x.:.:..x:.:::.xxx:.x....:.....x:x..-..x....x.:.:...:x:.:.....x:..x....:x..:x.:. 124M1I43M 99/167 59.3% 168/94230402 0.0% 1/167 0.6% 85413747 NA +3206 chr4 + 190214555 148755198 148755197 148755353 156 TCCTTTCCCTTCCTCCTCTTCTCCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTT----CCTTCTCTTTCTTTCTT chr4 - 94230402 32363142 32363141 32363301 61867102 61867101 61867261 160 TCTTCTCATTCCTTCATATCTTTTCCTGCTGCCCTTTTGTCTCAGTGTCTCTGGGCCTTCCTGCCCAGACCTCCCATCTTCTTCCTGCCTTCTTATCTTCCTTCCACTTCTGATTTCTTCTCGCCTAGCTCTCTACTTTTAGACATGCTTTTCCTTTTCT ..:.:..x:.:.:..x.x.::.::...x..x..:..:.x....xx.x.....xxx::.:...x:.:xxx::..::x::.....:..x:...::.x....:...:.x:.::.xx......:::x:..xx..:...x....----.x.x..:..:....::. 139M4I17M 88/156 56.4% 160/94230402 0.0% 4/156 2.6% 116392056 73822499 +3459 chr4 + 190214555 148755220 148755219 148755303 84 CCCCTCCTCCCTTTCTCTCTCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 8141239 8141238 8141320 86089083 86089082 86089164 82 CCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCC--CCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ...:...x..:..x..x.......:...:x...x.....--:..x.....:...:...:..:.:.x.x:.:....::.::.:.. 39M2D43M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 140613981 49600574 +3213 chr4 + 190214555 148755239 148755238 148755308 70 TCTCTCTCTCTTTCTTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .....:.:..x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 103157526 87057029 +3016 chr4 + 190214555 148774518 148774517 148774562 45 TTGTATGTCTAAAGACAGTTGCTCTTTTGATAGTACATAAAAAAA chr4 - 94230402 59268941 59268940 59268985 34961418 34961417 34961462 45 TTGTATGTCTAAAAACAGTTGCTTTCTTTGTGATACTTAAAAAAA .............:.........:.:..x:.::...x........ 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 89505577 NA +3203 chr4 + 190214555 148785210 148785209 148785289 80 TCATCCTTCTTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCT chr4 - 94230402 200610 200609 200689 94029714 94029713 94029793 80 TCATCCCTCTTTCATTACACGGTTTGTTTTTCCTTTTTTTCCCTTCTTCTTTATTTCCCCCCCCCCCTCTTTTCACTCCT ......:....x:x..x.x:xx...x.....:....:....::..:......x....:::.:.:::..:.:..:x:.... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 148584600 41629955 +3059 chr4 + 190214555 148785213 148785212 148785279 67 TCCTTCTTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTT chr4 - 94230402 9693768 9693767 9693834 84536569 84536568 84536635 67 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT .:....:.x..::.:.::....:..:..:x:...:.x:....x..x...:........:.....::. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 139091445 51123110 +3371 chr4 + 190214555 148785214 148785213 148785307 94 CCTTCTTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTC chr4 - 94230402 18988809 18988808 18988902 75241501 75241500 75241594 94 CTTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC .:.:x.....::.:x.x:...x:...:...xx:::.x..............:....:.......x...x.xx.:.:.x:...:.x:..x..x.. 94M 61/94 64.9% 94/94230402 0.0% 0/94 0.0% 129796405 60418150 +3062 chr4 + 190214555 148785217 148785216 148785257 41 TCTTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTT chr4 - 94230402 72884654 72884653 72884694 21345709 21345708 21345749 41 TCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCT .......::....:...........:.......:.....:. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 75900563 NA +3072 chr4 + 190214555 148785219 148785218 148785305 87 TTGTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTTCCTTCCT chr4 - 94230402 14183506 14183505 14183592 80046811 80046810 80046897 87 TTGTCTATCTTCCTACTCTTTTTATTTTCTTCTTTTTATATTTTCAATTTTCTTTTCCCTTTATGTTAGCATTCCTCTTATCTTTCT ......x....:..x:::.....x...::........x.x...::xx:.....:..:.:..:x.x:.xx.x.:.:....x:...:.. 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 134601713 55612842 +3338 chr4 + 190214555 148785221 148785220 148785340 120 GTCTTTCTTTCTTTCTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTCTTTCTT chr4 - 94230402 81461665 81461664 81461784 12768619 12768618 12768738 120 GTTTTTAATTCTTCCTTTTCTTTTTTTCTCCTGACTTCTCACCATGTTTCCTTCATTAAATGTCATCCATTCCACTTCTTGCTGTGCCTTCCCTCCCCCTTCTCTTCTTGCCCCCTTCTT ..:...xx.....:.....:.:...:.:..:.xx:....:x.:x.x....::.:x:.xxx.x..x...x.:.:x...:::x::x.x......:...::.:.:....::.x:.:.:..... 120M 70/120 58.3% 120/94230402 0.0% 0/120 0.0% 67323556 NA +3141 chr4 + 190214555 148785317 148785316 148785381 65 TTCCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ....x..:.............:...:.....::::.:.::....:....x.xx..:::.:x.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 83569651 NA +3027 chr4 + 190214555 148785410 148785409 148785460 51 TCCTTCCTTCCTCTCTCTCTCCCATTCTTTCTTTCTTTTCTTTCTGTTTTA chr4 - 94230402 36600615 36600614 36600665 57629738 57629737 57629788 51 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTTTA .....::...........:....x.....::.:::...:x.....x..... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 112184795 78029760 +3298 chr4 + 190214555 148795523 148795522 148795603 81 TCTCTCCCTCTGTGTGTGTGTATGTTTGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGTTAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 18982273 18982272 18982353 75248050 75248049 75248130 81 tctttctttctttctttttttttctctctctctctctctctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ...:..::...x.x.x.x.x.x.x.:.x.x.x.x.x:x.x.x:................x..................:.. 81M 58/81 71.6% 81/94230402 0.0% 0/81 0.0% 129813250 60401305 +3011 chr4 + 190214555 148795566 148795565 148795600 35 GTGTGTGTGTGTGTGTTAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629065 81629064 81629099 12601304 12601303 12601338 35 GTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .........:......x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 67166501 NA +3674 chr4 + 190214555 148797939 148797938 148798068 130 AAACCATATTCATTTTTTTGAATTACCATACCCCAC----CACTGATTTATTATATATGGGATTTGTCATATATAACATGAGTTTTATATATATATATATAAAATACATATATATAAAATATATATATATAATA chr4 - 94230402 20751332 20751331 20751461 73478942 73478941 73479071 130 AAAGCATATTAATTTC----AATTGCCATATGCTTAAGTACAAAAATTTGGGGCATTTAGAATTTCATTTATATAACATTAGTTATGTAAGTATACATATATGACATATATATATATATTATACACGTACGACA ...x......x....:----....:.....:x.:xx----..xx:....:xx::..x.:.:....xx:x..........x....x.:..x:....:.....x:.:.:.........x.x....:.::..::.:. 16M4D16M4I94M 84/126 66.7% 130/94230402 0.0% 8/126 6.3% 128046607 62167948 +3283 chr4 + 190214555 148798266 148798265 148798324 59 TTTACATATATATGTTTATATATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089489 48089488 48089547 46140856 46140855 46140914 59 TTGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ..x..x.x.:..x..:.:......x.:........:....x.x........:....... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 100708777 89505778 +3960 chr4 + 190214555 148807460 148807459 148807653 194 AAGAAAAGGAAAGAACAGAAAAGAAAAGAGAGAGAGAACAAAAAAGGAAGAAGGG-AAGGAAGA--------GAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAA chr4 - 94230402 56098348 56098347 56098540 38131863 38131862 38132055 193 AAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATC----------CAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAA ...::.x...:.x....:.::...x:x.x..xx.x:x...:.:.:.x:..:x...-..:.....--------.....xx:.::.....xx.....::xx....xx----------x...x....:...x::.:..xx.:....x.....::...:....:..:.:x....::..:::......xx.:..:::xxx:....... 55M1I8M8I33M10D88M 113/184 61.4% 193/94230402 0.0% 19/184 10.3% 92709112 NA +3205 chr4 + 190214555 148807480 148807479 148807601 122 AAGAAAAGAGAGAGAGAACAAAAAAGGAAGAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAG-AAGGAAAG chr4 - 94230402 4651287 4651286 4651409 89578994 89578993 89579116 123 AAAAAAGGGGGAAGAAAAACAAACGTGTAGAAGTGAAAAATATTCCACAAACCGCACAGGAAGAGGCAAAGAGAGATACAGAGCTAAGAAGTTAAAAAAAGAACAGAGAGAAAGTAAGGATAG ..:...:.:.::...:..xx...x:x.x.....x...::.x:xxxx.x...xx.x.x..:.:..:.x..:.:....x.x...:xx..:..:xx...:......x...:......-.....x.. 114M1I8M 77/122 63.1% 123/94230402 0.0% 1/122 0.8% 144156193 46058362 +3182 chr4 + 190214555 148807488 148807487 148807571 84 AGAGAGAGAACAAAAAAGGAA-----GAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAA chr4 - 94230402 26473476 26473475 26473563 67756840 67756839 67756927 88 AGAGAG-GTACAGGAAAAGAACATTTGAAAGGAGGAAAAAGTGAAAAGGGGAAAGGAAGGAAGGAATTGTAAAGAGATGATAATCAAAA ......-.x...::...:...-----...:...:.:..:..x..:..:.:....:...........xx.x.:.....x:.x:.xx.... 6M1D14M5I63M 60/83 72.3% 88/94230402 0.0% 6/83 7.2% 122334012 67880543 +4398 chr4 + 190214555 148807495 148807494 148807593 99 GAACAAAAAAGGAAGAAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAG chr4 - 94230402 13061556 13061555 13061654 81168749 81168748 81168847 99 GAGTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGCTAAATCAATAAATGAATGGGAGAAAGAGGAGGAAAAAAAAAAAAAAGAAAATGAGAAAAAG ..::......::..:..:::..::..:.:.:.:..:.xx...xx..x:..x...x......:....:.:........:...:..::...x..:.:.... 99M 66/99 66.7% 99/94230402 0.0% 0/99 0.0% 135745939 54468616 +3282 chr4 + 190214555 148807496 148807495 148807604 109 AACAAAAAAGGAAGAAGGGAAGGAAGAGAGAGAAAGAGAAA----------------AGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAA chr4 - 94230402 71899229 71899228 71899353 22331050 22331049 22331174 125 AAAAGAAAAAGAAAAAGGAAAAAAAACAACTTAATGTGCAACTACCCAAACTTTTTTGGTAGGACATGGAGGGAGAGATGGCGAGGAGATGAAAAAGAAAGAAAATAGAAAAAGAGGGAAAAAAA ..x.:....:...:....:..::..:x:.xxx..x.x.x..----------------:.x....x:x:::........x:.x:..:.:.x:.:............x.:.:.....:.....:... 41M16I68M 71/109 65.1% 125/94230402 0.0% 16/109 14.7% 76908267 NA +3031 chr4 + 190214555 148807510 148807509 148807582 73 AAGGGAAGGAAGAGAGAGAAAGAGAAAAGAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAA chr4 - 94230402 36858304 36858303 36858376 57372027 57372026 57372099 73 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.:...x...:......:.:......:x..x.:xx..:......::...:.x::::.x......::..:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 111949206 78265349 +3441 chr4 + 190214555 148807535 148807534 148807659 125 AAAGAAGGAAGGAAGGGGAGAGAG----AGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGAAGG chr4 - 94230402 10903347 10903346 10903475 83326928 83326927 83327056 129 AAAAACGCAGAGGTGAGGACTGAGTTTCAGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAATGTGGG ...:.x.x.::.:x.:...xx...----......:.:...::.....x......:x:x:.:.:x..::xx...x......:.:.:....:::.xx.....:.x....:x:.x:.:x.......x.x:.. 24M4I101M 77/125 61.6% 129/94230402 0.0% 4/125 3.2% 137904188 52310367 +3205 chr4 + 190214555 148807538 148807537 148807629 92 GAAGGAAGGAAGGGGAGAGAGAGAAAGAAAAAAAGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAA--------AGAAAAAGAAAGGAAGAA chr4 - 94230402 44400495 44400494 44400594 49829809 49829808 49829908 100 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA ..:...:..::.........::.......:....:..::..::..x:.:x.:...x...xx.x::..:.x:...--------.......xx.::..::.. 74M8I18M 60/92 65.2% 100/94230402 0.0% 8/92 8.7% 104407043 85807512 +3321 chr4 + 190214555 148807571 148807570 148807645 75 AGAAAGAAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAG chr4 - 94230402 65614384 65614383 65614458 28615945 28615944 28616019 75 AGCAAAAGGAAAAAGGGAGAGAGTAGAAAACACAGAATGACAAGTGAAGCAAAGGAGAAAAAGAAGAGAAAGAAG ..x..:.:::.....::...:..x..:...x.x....x..x.::x:...x..:.:..........::...:.... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 83193187 NA +3070 chr4 + 190214555 148807584 148807583 148807641 58 AGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAG chr4 - 94230402 13664063 13664062 13664120 80566283 80566282 80566340 58 AGAAAGAAAGAAGAAAGGAAAAACAAGATGAATTTGAAGGTGAGACAAAGAAAGGAAG .............:..:....:.x.::.x...xxx...:.x:...x............ 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 135143521 55071034 +3215 chr4 + 190214555 148807584 148807583 148807678 95 AGAAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAAA-------GAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGAAGGGGAAGGGGAAGGAGGGTGG chr4 - 94230402 10903375 10903374 10903474 83326929 83326928 83327028 100 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAA--TAAAGGAATGTGG ......:.::...:.....x.....:.x:x..:..-------...x.:....:.........::.xx..:..::x..:..x..x...--x:.....:x.... 35M7I45M2D13M 65/93 69.9% 100/94230402 0.0% 9/93 9.7% 137904209 52310346 +3062 chr4 + 190214555 148807609 148807608 148807684 76 GAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAGGAAGGAAAGGAAGGAAGGGGAAGGGGAAGGAGGGTGGAAGGAA chr4 - 94230402 40472544 40472543 40472618 53757785 53757784 53757859 75 GGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAA-AAAGATGGAAGAGA .:..:.........::...:....:......:..::..:::..::...xxx:::...x...-:.:.:......::. 61M1D14M 49/75 65.3% 75/94230402 0.0% 1/75 1.3% 108335065 81879490 +3051 chr4 + 190214555 148842193 148842192 148842238 46 TTCAGAATAAGAAAAAACAAAACCCAGCCTAAATGCTTCTCTGAAG chr4 - 94230402 9356037 9356036 9356082 84874321 84874320 84874366 46 TTTAGAAAAAGCAAAAACAAAACCCAACCTAAATACATCTCCAAAG ..:....x...x..............:.......:.x....::... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 139486156 50728399 +3198 chr4 + 190214555 148846979 148846978 148847028 50 TATATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATCTTGG chr4 - 94230402 19704285 19704284 19704334 74526069 74526068 74526118 50 TATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGG ......:....:.:.x.....:...x::...........:..x....... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 129142694 61071861 +3124 chr4 + 190214555 148896030 148896029 148896078 49 TATTTGACCTTGGGCAAGTCATTTAACTTCTCTGTGCCTTGATTTTCTC chr4 - 94230402 51928851 51928850 51928899 42301504 42301503 42301552 49 TATTTGACCTTGGGCAAATCATTTAACCTCTGTGCTTCTTCATTGTTTC .................:.........:...x..:x:...x...x.:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 96967179 93247376 +3016 chr4 + 190214555 148896034 148896033 148896066 33 TGACCTTGGGCAAGTCATTTAACTTCTCTGTGC chr4 - 94230402 11909572 11909571 11909604 82320799 82320798 82320831 33 TGACCTTGGGCAAGCCATTTAACTTCTCTGTGC ..............:.................. 33M 32/33 97.0% 33/94230402 0.0% 0/33 0.0% 136986462 53228093 +3317 chr4 + 190214555 148930185 148930184 148930232 48 AGTTAAAAAAGCAAAAACAACCAAAAAAAAAAAAAACCCCAAAGTACA chr4 - 94230402 50751886 50751885 50751933 43478470 43478469 43478517 48 AGTTAAAAAAACAACAACAACCAAAAAAAAAAAAATCCTGAAAATGCA ..........:...x....................x..:x...:.:.. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 98178299 92036256 +3302 chr4 + 190214555 148934481 148934480 148934533 53 TGGGA--GGATCACTAAAAACAAACAAACCAAAAACAACAACAACAAAAAAAAAC chr4 - 94230402 18021878 18021877 18021932 76208471 76208470 76208525 55 TGGGAATGGATCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAAC .....--......xx....:x........x..x...................... 5M2I48M 47/53 88.7% 55/94230402 0.0% 2/53 3.8% 130912603 59301952 +3309 chr4 + 190214555 148955038 148955037 148955135 98 ATTCTTAAAGTGAATCTCCAAATTTTCTTGATCA--TACATATTTTTTAGCACATCCTTCTAAGATAAATATCTCCATTCATTTATTCAATTACTATATA chr4 - 94230402 20730707 20730706 20730806 73499597 73499596 73499696 100 ATTCTCTAAGACAATCTAAAAGTATGAATGAGCAAATACTGACTTCCTAACATGTCTTTCTAAGATAAATCTTTTCATTTAATTTTTGTATAACTATATA .....:x...xx.....xx..:.x.xxx...x..--...xx.:..::..:..::..:.............x.:.:....:.x..x..xx..x........ 34M2I64M 68/98 69.4% 100/94230402 0.0% 2/98 2.0% 128224331 61990224 +3075 chr4 + 190214555 148957982 148957981 148958055 74 TGTATATATATGTATATATGTATGTGTATATATATATGTATATTTGTATCTGTGTGTGTATATATATATATATA chr4 - 94230402 54293155 54293154 54293228 39937175 39937174 39937248 74 TGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..:.:..x.....................:xxx:......x.x:x...:x:::x:::...:.:.:......... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 94664827 NA +4161 chr4 + 190214555 148968517 148968516 148968611 95 AAATATATATATATATGTATATA---TGTATGTATGTATGTGTGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398776 33398775 33398873 60831530 60831529 60831627 98 AGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .:.x.....:.:.:...:::.:.---::...:x......x.:x:x.....:..:.:.:....:.:.......:.x.............x.....x... 23M3I72M 67/95 70.5% 98/94230402 0.0% 3/95 3.2% 115569741 74644814 +4581 chr4 + 190214555 148968517 148968516 148968607 91 AAATATATATATATATGTATA-----TATGTATGTATGTATGTGTGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398778 33398777 33398873 60831530 60831529 60831625 96 AAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .......:.:.:..::.:.:.-----...:x......x..x:x.....:......:....:.:.......:.:.x...........x.....x... 21M5I70M 69/91 75.8% 96/94230402 0.0% 5/91 5.5% 115569739 74644816 +3275 chr4 + 190214555 148968521 148968520 148968570 50 ATATATATATATGTATATATGTATGTATGTATGTGTGTGTGTGTGTATAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...:.......:........x.:.......x::.............:x.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 129264241 60950314 +3030 chr4 + 190214555 148968524 148968523 148968574 51 TATATATATGTATATATGTATGTATGTATGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x........::::...:........x.x................ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 100879027 89335528 +3352 chr4 + 190214555 148968527 148968526 148968651 125 ATATATGTATATATGTATG---TATGTATGTGTGTGT----GTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATCATACCAAGAACCAGGAATTCAAAACTTGAA chr4 - 94230402 33398780 33398779 33398905 60831498 60831497 60831623 126 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtat------gggaactgttgaatcatagcctgaa .....:::.:..::.:.::---:..:..x:...:.x.----.....::.:.:.:....:.:.......x.x.............x.....x...x.x::..------::....::xx:.x...x.:.:.... 19M3I15M4I60M6D25M 78/119 65.5% 126/94230402 0.0% 13/119 10.9% 115569747 74644808 +3959 chr4 + 190214555 148968535 148968534 148968650 116 ATATATGTATGTATGTATGTGTGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAC------ATCATACCAAGAACCAGGAATTCAAAACTTGA chr4 - 94230402 33398803 33398802 33398924 60831479 60831478 60831600 122 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGATAtgtatgggaactgttgaatcatagcctgaacctctgattgaccacctga .....x:.:.:.x.:x.x.....:...........:.:.......:.:.x.x.........x.....x...x.x:x.x:.::..------......x.xx.....xxx:...x.xx..:... 84M6I32M 80/116 69.0% 122/94230402 0.0% 6/116 5.2% 115569732 74644823 +3733 chr4 + 190214555 148968539 148968538 148968609 71 ATGTATGTATGTATGTGTGTGTGTGTGTATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398803 33398802 33398873 60831530 60831529 60831600 71 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..:..x:.:.:.x.:x:x.....:....:.:....:.:.......:.:.............x.....x... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 115569736 74644819 +3567 chr4 + 190214555 148983894 148983893 148983955 62 TGGTGTATGTGTTTGTGTGTGTGTGTGTGTGCACATGTGTAGGTGGAGATGAGATATTCCTA chr4 - 94230402 50558508 50558507 50558569 43671834 43671833 43671895 62 TAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTA .:...:.................::.....::......:...:::....x:..x.x..::.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 98425386 91789169 +3228 chr4 + 190214555 148991486 148991485 148991547 62 GCCAGTGTTCTCTAGGGATATGCTTTTTTTTTCTTTTCCTGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 76182389 76182388 76182450 18047953 18047952 18048014 62 GTCAGTCATACCTTAGCATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTT .:....xx.x:..x:.x.............x..x.:.:.x.........x............ 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 72809097 NA +3034 chr4 + 190214555 148996000 148995999 148996053 54 AAGAAATAATTTTCCAGAAAAAATGTTTGTTGTTATTTTTCTTTAGAAGCAGCA chr4 - 94230402 34848050 34848049 34848103 59382300 59382299 59382353 54 AAGAAATAATTTTGCAGAAAATAAGTATTTTTTTGTGTTCCCTTAGAAGCAGTA .............x.......x.x..x.x..x..:.x..:.:..........:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 114147950 76066605 +3132 chr4 + 190214555 149047258 149047257 149047332 75 AGTTCTGTATATATATGTGTATATATATGCATATCTATGTGTATATATGTGTGTGTATATATATGTGCATATATA chr4 - 94230402 39267136 39267135 39267210 54963193 54963192 54963267 75 AATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA .:...:.....x..:.......:x:::::.:.:x..:.....:.:...:.:x....::..x.:.:..x.....:. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 109780122 80434433 +3521 chr4 + 190214555 149047260 149047259 149047349 90 TTCTGTATATATATGTGTATATATATGCATATCTATGTGTATATATGTGTGTGTATATATATGTGCATATATATGTGTGTGTATATATAT chr4 - 94230402 70982593 70982592 70982681 23247722 23247721 23247810 89 TTTCATATATATATTTATTCATGTA-ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..:::.........x.:.x:..:..-:.x.x.:.x:x...:.:.:...:.....:..:......x....x..:......::..:.:.:.. 25M1D64M 60/89 67.4% 89/94230402 0.0% 1/89 1.1% 78064667 NA +3906 chr4 + 190214555 149047305 149047304 149047508 204 TGTGTGTGTATATATATGTGCATATATATGTGTGTGTATATATATACATATATGTACACATATATGTATATATATGTGTGTATATATATAC----ACATACACACACATATATATATATATCCTATTAGTTCTGTCCTTCTAGGGAACCCTGACTAATACACCCCCAAATGACTTCACATTAGATTCCTGCATCTCACAGTGACTGCA chr4 - 94230402 73121102 73121101 73121284 21109119 21109118 21109301 183 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACAC------GAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATT-------TTTCAGATACGCTCAGCCCATACACC----GATGCTTTGACAT--------TTCATCACCAAGTAATTGCA ....::..:....x:..:::......:.::x:x.::.:x:..:....:....x......------.x:.....:..x..::.....x....----...x.x........:....x::.x..:::x...x.-------..::..:x.xx.::::.:x.......----:...x:..x....--------.x....x.xx...:.:.... 59M6D26M4I35M7D26M4D13M8D20M 116/179 64.8% 183/94230402 0.0% 29/179 16.2% 75926203 NA +3028 chr4 + 190214555 149047316 149047315 149047370 55 ATATATGTGCATATATATGTGTGTGTATATATATACATATATGTACACATATATG chr4 - 94230402 56650830 56650829 56650884 37579519 37579518 37579573 55 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG .:..x..::..xx......:.....:..x..........:.:::...:....... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 92396486 NA +3383 chr4 + 190214555 149047330 149047329 149047421 92 ATATGTGTGTGTATATATATACATATATGTACACATATATGTATATATATGTGTGTATATATATACACATACACACACATATATATATATAT chr4 - 94230402 8395788 8395787 8395869 85834534 85834533 85834615 82 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACAT---------TA-ATACACACACACACACACAGACACAAATGAAT ..:.....:...:.::...x....:...x....:..:....:x..:..---------..-...:.....:.........x.:.:.x..:x.. 48M9D2M1D32M 61/82 74.4% 82/94230402 0.0% 10/82 12.2% 140651542 49563013 +3181 chr4 + 190214555 149047362 149047361 149047415 54 ACATATATGTATATATATGTGTGTATATATATACACATACACACACATATATAT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ....x.::::.xx......:....::..x....:.................... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 92396532 NA +3123 chr4 + 190214555 149047377 149047376 149047426 50 TATGTGTGTATATATATACACATACACACACATATATATATATATCCTAT chr4 - 94230402 64433220 64433219 64433269 29797134 29797133 29797183 50 TGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGT .:.....:.......x.............:....::...:...::.x.:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 84614157 NA +3300 chr4 + 190214555 149063424 149063423 149063517 94 TGTGTGTTTGTGTATGTTTGGAGTGGTAATGATAGCAAATAAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCCAGGAGGAAAA chr4 - 94230402 84133998 84133997 84134089 10096314 10096313 10096405 92 TGTTTCATTATGTGTGTT--GGGCTGCACTGGAAGAGGAGGAAATGTCTTTTTTTTTCTGGTTTTCTTTGTTTTATTTTTTCCCCAGAGGAAAA ...x.xx..:...:....--.:.:x.:.x..:x..x::.x:..:...:.........:.xx....:...x....x.....x:..x:........ 18M2D74M 63/92 68.5% 92/94230402 0.0% 2/92 2.2% 64929426 NA +3047 chr4 + 190214555 149119382 149119381 149119471 90 GTATTTTCAATATATTTTATATGTGTGTGTATGTATGTATGTGTGTGAATGTATATATATATATCTCCTGTGTTAACATATATATTTGTG chr4 - 94230402 19559265 19559264 19559350 74671053 74671052 74671138 86 GCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTT----GTATATTCTtgtg .:.....:...x.x.....xx.:.x.x.x.x...:...:.......:x..:..........:.x..xx.x.x.----:.....x:..... 73M4D13M 61/86 70.9% 86/94230402 0.0% 4/86 4.7% 129560117 60654438 +9683 chr4 + 190214555 149122528 149122527 149122823 296 GCATTCTCCTTCACTGTGGACTGACTAGCA----AGGATCTCTCCAACAGGCA--CTTGCCTCTCTTTCTCTCCTCCTCCCTTTGTTCCTTTGCCCACTATGTAAGCAATTAGTACAATTGAATCCTTAATAAGCCAATTTAGTCCAGCCCACGTAGCTATTTTGCTCCTAATAAATCAATTAATTCAGCTCACATTGAGGGGACTGTCATGTTTACAATATCACAGTCAGCGTCTATATATTTGTGCAAGAAATA-AGATGGTAAGGAGTATTTTTAG---AATAAAATTTCATTTTTCTCTTTG chr4 - 94230402 60597399 60597398 60597686 33632717 33632716 33633004 288 GCAGTCTTTTTCAGCCTGCCCTGGCCAGCAGCCCATCAGCTGTTCCACAAACAAACATATATTTCTCTCTCTATTTGTTTCTTCTTTTTTAT-CCCACTGTACAAGCAATTAG--CTATTGAATCCATAATAAGCCAATCCAGTCCAACCCACATGATTATTTTGCTTCT----CATCAATTTATTCAGCTCACGTATAGGGTTTTATCATATTTACAATATCACAGC-----------TATTTGTGTGGGAGTTATAAAAGGTAAGGAGTAATTTTAGGGAAAGAAAATCCAGTTGTAGGCTTTG ...x...::....x:x..xx...:.:....----.xx.x..x.:.x...::..--.x.::x.:...:.....x:.:x.::...:x..::.x.-......:.::..........--.x.........x............::......:.....:.:::.........:..----x.......x...........:.xx....xx:.:....:...............:-----------........:::..:x..-.:.x...........x......---..x.....::x:..x.xxx..... 30M4I19M2I37M1D20M2D55M4D54M11D17M1I22M3I24M 202/278 72.7% 288/94230402 0.0% 28/278 10.1% 88525129 NA +3441 chr4 + 190214555 149143907 149143906 149144045 139 CCTTCACTTCTCCACTCCTTCCTTCTTTCATTCCTTCCTTCCTTTCCTTTTCCTCCTCCTCCTTATTCTTCATTTTCATCTTCTTCTCCTTTTCATTTCTTTCTTCTTT----TTCCTTTCCTTTCTTCCTTTTTCTTTTCCT chr4 - 94230402 83960510 83960509 83960645 10269758 10269757 10269893 136 CCTTCATTTATTCTCTCTTCCCAATACTCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTC-------TTTCACTGTTTTTCTGTTTGAAATACCTTTACATTTCTGATATTTCTTTGCCT ......:..x.:.x...:.:..xx:x:..x......:x...:.:x:x:...:..:xx...::.xx.....:...:..x.....-------.....:.x:...::.x...----.x.....x.x..::.xx.x.......x... 83M7D19M4I30M 86/132 65.2% 136/94230402 0.0% 11/132 8.3% 65183397 NA +3867 chr4 + 190214555 149143912 149143911 149144053 142 ACTTCTCCACTCCTTCCTTCTTTCATTCCTTCCTTC--CTTTCCTTTTCCTCCTC----CTCCTTATTCTTCATTTTCATC------TTCTTCTCCTTTTCATTTCTTTCTTCTTTTTCCTTTCCTTTCTTCCTTTTTCTTTTCCTTTCCTCTT chr4 - 94230402 17018259 17018258 17018406 77211997 77211996 77212144 148 ATTTCTCAACATTTTTTTTCTGGCATTTTTACATTCAGCTGTATACTTGCTTCACATTGCTTTTTGTCTTTCATTCTCATCAGTAAACTCTTCTCCCATTCTATTCCTCTCTCTCTCCCCTCTC------TCCATTTTCTTTCCCTTTCCTATT .:.....x..x::..::....xx....::.x.x...--..x.x:x:..x..:.x.----..::..:.::......:.....------:........:x...xx...:.:::...:.::...:..------...x........:........x.. 36M2I17M4I22M6I37M6D24M 93/136 68.4% 148/94230402 0.0% 18/136 13.2% 132125653 58088902 +3385 chr4 + 190214555 149143990 149143989 149144096 107 TTCTCCTTTTCATTTCTTTCTTCTTTTTCCTTTCCTTTCTTCC--TTTTTCTTTTCCTTTCCTCTTCCTTCCC-------TTCTCCCTTCCTTCCTTCTTTCCTTCCTTCCTTTCC chr4 - 94230402 81583171 81583170 81583286 12647117 12647116 12647232 116 TTCTCTTTTTTTTTTTTCCCCTCACAACCTTGTCCTATTTTCCCATTTTTATTTTCTCCTTTAATTTCTTCCCATTAATTTTCCCTCTTCCCCCCCCCTTGCATTCATTACCTTCC .....:....:x...:.::.:..x:xx:.:.x....x.:....--.....x.....:::.::xx..:......-------...:.:.....::..::...x.x...x..x.:.... 43M2I28M7I36M 71/107 66.4% 116/94230402 0.0% 9/107 8.4% 67560819 NA +3260 chr4 + 190214555 149143991 149143990 149144147 157 TCTCCTTTTCATTTCTTTCTTCTTTTTCCTTTCCTTTCTTCCTTTTTCTTTTCCTTTCCTCTTCCTTCCCTTCTCCCTTCCTTCCTTCTTTCC--------------TTCCTTCCTTTCCTTTTCCTCCTCCTACTTATTC------TTCGTTTTCATGTTCTTCTTCTTCTCCTTT chr4 - 94230402 61964741 61964740 61964917 32265486 32265485 32265662 177 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT .........:x.:.x....xxx.:xx::x:.xx.:.x:...::.x..x........::::.:...:..:.:.....::..:..:....:....--------------:.......::xxx:.::..:....x:...:x.:x------:..x.:.:....:..:::x:x.:.:..:.. 93M14I34M6I30M 91/157 58.0% 177/94230402 0.0% 20/157 12.7% 87179250 NA +3051 chr4 + 190214555 149144022 149144021 149144069 48 TCCTTTCTTCCTTTTTCTTTTCCTTTCCTCTTCCTTCCCTTCTCCCTT chr4 - 94230402 36600615 36600614 36600662 57629741 57629740 57629788 48 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTT ......:.....:.:.....:......:........::.x.:..::.. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 112543407 77671148 +3541 chr4 + 190214555 149144102 149144101 149144180 79 CTCCTCCTACTTATTCTT--CGTTTTCATGTTCTTCTTCTTCTCCTTTTCTTTCTTTCTTTTTCTTTCTTTTTCTCCTTCC chr4 - 94230402 28727283 28727282 28727363 65503040 65503039 65503120 81 CTCCCCTTGCCCCTTCTTGCCTTTTTCCCATGCTTGTTCTTCCCCCATCCACTTTATCTTTTTCTTCCTTTTTCTCCTCCC ....:.:.:.::x.....--.x.....x::.x...x......:..:x.:.x:.:.x..........:...........:.. 18M2I61M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 120416819 69797736 +3141 chr4 + 190214555 149144131 149144130 149144289 159 TCTTCTTCTTCTCCTTTTCTTTCTTTCTTTTTCTTTCTTTTTCTCCTTCCTTCCTTTCCTCTTCCTCCTCCTCCTCTTCCTTCTCTTCCTCCT----------TATTCTTTGTTTTCATTTTCTTCTTCTCTTTCTTCT---------TTTTCTCTATTTCTCCCCCCTTCCTTCCTT chr4 - 94230402 61964741 61964740 61964917 32265486 32265485 32265662 177 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCA-TGCTCCCTGCATCCCCCCTT ...:...:.....:x....xxx::xx..x:.xx::.x...:...x:.x::......::::.:...::......::..::...:.......:.:----------:.....::x.:::.:xx:..::.::...x:x..:..---------.::....:.-.x.....:x.x...::.... 93M10I36M9I9M1D20M 92/158 58.2% 177/94230402 0.0% 20/158 12.7% 87179390 NA +3279 chr4 + 190214555 149144180 149144179 149144300 121 CTTCCTTTCCTCTTCCTCCTCCTCCTC----TTCCTTCTCTTCCTCCTTATTCTTTGTTTTCATTTTCTTCTTCTCTTTCTTCTTTTTCTCTATTTCTCCCCCCTTCCTTCCTTTCCTCTTCCTC chr4 - 94230402 38223649 38223648 38223773 56006630 56006629 56006754 125 CTTTCTCGCCTCCTCCCCACCCTCCCCCGCCTTCCTCCTCTTTCACCTTCTTCCTACCCATCACTCACTGCTGCTGACTCCACACTGTTTGTACTTCTGCTTCCTCCCTGCACATCTGCTGTCTC ...:..:x....:...:.x:.....:.----.....:.....:.x....x...:.xx::x...:.:x..x..x..xx:..:x.x:.x.:.x..:....x.::...:...x.x:x..:x..x:... 27M4I94M 75/121 62.0% 125/94230402 0.0% 4/121 3.3% 110920531 79294024 +4209 chr4 + 190214555 149144291 149144290 149144458 168 CCTCTTCCTCCTCCTCCTCTTTCTTCATCTTCATTTTCTTCTTCTTTCTTTCTTTCTTTCCTTTCTTTTCTCTATTTCTTCCTTCCTTCATTCATTTGTTCTTTTTATTCTTTCTTTCTTTCTTTTTCTCTTTTT--CCTTCCATTATATTTCTTCTTTCTGTCTTTCAT chr4 - 94230402 45185582 45185581 45185746 49044657 49044656 49044821 165 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACC---TTTCTTCTTTCTTTAACTC--TTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAAT .:.x..x...x.::...:::...:.x:...:x:......x....x..........::..:.x..:..:x.:---.......:...:..x.:..--..x:::..:.:.:.:xx.x:....:x..x:..x.....:.--..x:..x.x..x.:.:x.::..:.x.....x.. 71M3D19M2D40M2I33M 103/163 63.2% 165/94230402 0.0% 7/163 4.3% 103958709 86255846 +3081 chr4 + 190214555 149144399 149144398 149144451 53 TCTTTCTTTCTTTCTTTTTCTCTTTTTCCTTCCATTATATTTCTTCTTTCTGT chr4 - 94230402 69710926 69710925 69710978 24519425 24519424 24519477 53 TCTTTTTTTTTTTCTTTTTCCTTTTTTTCTTCCATTAAAGTTTCTCATTTGGT .....:...:..........::.....:.........x.x..::..x..:x.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 79433473 NA +3048 chr4 + 190214555 149189869 149189868 149189915 47 AAAAAAACAACAACAACAACAAAAAAAAGGGGGTAAAACAGATCCTC chr4 - 94230402 18021903 18021902 18021949 76208454 76208453 76208500 47 AAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAAAATCCTC ...x........................:x:..x...:x.:...... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 131167966 59046589 +3168 chr4 + 190214555 149195561 149195560 149195629 69 TATGTATGTATATGCACACATATATATACACATAGATATATAAACATACACACTTATATGTGTGTTTGT chr4 - 94230402 52481236 52481235 52481304 41749099 41749098 41749167 69 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTAT ..::.:x:....x..::....:...:..:.....x::.:...xxx...:.x................:. 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 96714325 93500230 +3482 chr4 + 190214555 149255250 149255249 149255343 94 TTATTATCCTCATTTTATAGATAAGGAAAGTGAGACACAGAGAGATTAACTAACTGGCTCAAGGTCACACAGTTGATAAGCGGCAAGGCTGATA chr4 - 94230402 15193220 15193219 15193313 79037090 79037089 79037183 94 TTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTTATA .....x...x.........xx.:::.:..x...:..x....x.:..x..x.....xx.::.......:....:.x:.x..x:::..:::.x... 94M 62/94 66.0% 94/94230402 0.0% 0/94 0.0% 134062030 56152525 +3320 chr4 + 190214555 149269307 149269306 149269402 96 CACATGACTAAGCTAACTATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGT chr4 - 94230402 54293132 54293131 54293227 39937176 39937175 39937271 96 CATGTCATTAAAAAAACCCCAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATAT ..::.x.:...:xx...:x:.x..::.:..x...:.......:...:.:...:xxx:...:..x.xxx:.......x...::..........:.:. 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 94976175 NA +3817 chr4 + 190214555 149269314 149269313 149269399 86 CTAAGCTAACTATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATG chr4 - 94230402 8395781 8395780 8395866 85834537 85834536 85834622 86 CCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG .:.:..:.xx.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x... 86M 59/86 68.6% 86/94230402 0.0% 0/86 0.0% 140873533 49341022 +3034 chr4 + 190214555 149269322 149269321 149269402 81 ACTATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGT chr4 - 94230402 37363038 37363037 37363111 56867292 56867291 56867365 74 ATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-------ATATGTAT .:.:.:..:...:x.:......:..::.:.x......xx:.:.....:.:...:..:x........-------......:. 66M7D8M 52/74 70.3% 74/94230402 0.0% 7/74 9.5% 111906284 78308271 +3802 chr4 + 190214555 149269323 149269322 149269407 85 CTATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGTGTATA chr4 - 94230402 8395786 8395785 8395870 85834533 85834532 85834617 85 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x.:.::x:..x... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 140873537 49341018 +3031 chr4 + 190214555 149269324 149269323 149269385 62 TATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACA chr4 - 94230402 37363042 37363041 37363103 56867300 56867299 56867361 62 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .:..:...:x.:......:..::.:.x......xx:.:.....:.:...:...x........ 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 111906282 78308273 +3642 chr4 + 190214555 149269324 149269323 149269405 82 TATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGTGTA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x...:.x:..x:.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 140873535 49341020 +3277 chr4 + 190214555 149269342 149269341 149269414 73 TATATATATATATATATATATATATATATATATATACACACACACACACACACATATGTGTGTATATATATAT chr4 - 94230402 88147180 88147179 88147251 6083152 6083151 6083223 72 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATAGGGAGAAGCATAT ..:..:..x:x..............:.x.:.:...:.:.............-.....:.:x.x.x.x::.... 51M1D21M 53/72 73.6% 72/94230402 0.0% 1/72 1.4% 61122162 NA +3033 chr4 + 190214555 149269353 149269352 149269450 98 ATATATATATATATATATATATATACACACACACACACACACATATGTGTGTATATATATATTTGTGTGTGTGTATACATATGTACATATATATTCAT chr4 - 94230402 89016082 89016081 89016179 5214224 5214223 5214321 98 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGT ..:.::.:.:..x.::..::.:.:....::x::.:.........:::x:..:...:.::..xx........::x.:..x.::.:...:.::x..x.:. 98M 55/98 56.1% 98/94230402 0.0% 0/98 0.0% 60253271 NA +3255 chr4 + 190214555 149269364 149269363 149269453 90 TATATATATATATACACACACACACACACACATATGTGTGTATATATATATTTGTGTGTGTGTATACATATGTACATATATATTCATTCA chr4 - 94230402 73121102 73121101 73121191 21109212 21109211 21109301 90 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCA .:.::..::....x..:.....:.:.....x.x:::..x...:...::...xx..::::.x.....::.:x.........x..x.:::.. 90M 56/90 62.2% 90/94230402 0.0% 0/90 0.0% 76148262 NA +3075 chr4 + 190214555 149344625 149344624 149344705 81 CCTAGTCATCTGTATGACTCACAGAAGAACTAAAGAGATAAACATGCATGTGCTAAAAAAAAAAAAAAAAAAAAAAAGTAA chr4 - 94230402 64972021 64972020 64972101 29258302 29258301 29258382 81 CCTACTCATCCCTACTACTTCAAGAGGGGCTGTAGCATCAATCCTGCATGAGCTGGAAAAAAAAAGAAAACAAACAAACAA ....x.....:x..:x...:xx...:.::..:x..x:x:..x.x......x...::.........:....x...x..::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 84372604 NA +3325 chr4 + 190214555 149354354 149354353 149354415 62 ACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAACTGACAAATTAGGCCACAGTAATTGC chr4 - 94230402 88007416 88007415 88007477 6222926 6222925 6222987 62 ATTCTGCCTAAGAAGAAAGAAAGAAAAAAAAAAAAACTGATAAATTACTGAATGGTAACTGC .:..:.:..x.:..:...:...:.................:......xxxx.::....:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 61346938 NA +3064 chr4 + 190214555 149368692 149368691 149368805 114 TACAGGGTAATAAAAGTTAAAGACATTAG--AGTCAATGTGAAAGGCACAAATTATATATATACATGTATATATATATATACATATATATACATGTATATATATACATATATATAC chr4 - 94230402 19637076 19637075 19637185 74593218 74593217 74593327 110 TACAGGGAAATGAAT-----AGATTTCAGTAAATGGATACAGAAAGT-TAAGATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATAC .......x...:..x-----...:x.:..--.:.x:..::::..:.:-:..:x.:x...x..:...:..x..xx............x...x:...:..:.x...:.....::.... 15M5D9M2I16M1D68M 73/108 67.6% 110/94230402 0.0% 8/108 7.4% 129731616 60482939 +3574 chr4 + 190214555 149368742 149368741 149368852 111 TTATATATATACATGTATATATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATACATGTATATATATACATATATATA chr4 - 94230402 73121099 73121098 73121209 21109194 21109193 21109304 111 TCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .::.:.::..:...:.x:...:.:.......:.x.x::.::x...:...::..:.x:..:.::x:.:...:.:x:........x....::x:.:.x.x.:...:..:.... 111M 65/111 58.6% 111/94230402 0.0% 0/111 0.0% 76247643 NA +3752 chr4 + 190214555 149368855 149368854 149368943 89 TGTATATATATACATATATACACGTGTATATATATGTATAT-------ATATACACGTGTATATATATGTGTATATATATACACGTGTATATATAT chr4 - 94230402 87985346 87985345 87985441 6244962 6244961 6245057 96 TGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT ...:.:......:..x.......::x:x..:.:.x.Xx.x.-------:..x:x..............x............:......x..:..:. 41M7I48M 65/88 73.9% 96/94230402 0.0% 7/89 7.9% 61383509 NA +3060 chr4 + 190214555 149368858 149368857 149368915 58 ATATATATACATATATACACGTGTATATATATGTATATATATACACGTGTATATATAT chr4 - 94230402 17520753 17520752 17520810 76709593 76709592 76709650 58 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .......x...:.x......:.::..:.:x...:x.:....x....:..:........ 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 131848105 58366450 +3141 chr4 + 190214555 149368869 149368868 149368942 74 TATATACACGTGTATATATATGTATATATATACACGTGTATATATATGTGTATATATATACACGTGTATATATA chr4 - 94230402 37363042 37363041 37363112 56867291 56867290 56867361 71 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATA .:..:.:..x........:...:.:.x.....:xx........:.:.:.....x:.:.:...---:...:.... 62M3D9M 51/71 71.8% 71/94230402 0.0% 3/71 4.2% 112005827 78208728 +3876 chr4 + 190214555 149368878 149368877 149368971 94 GTGTATATATATGTATATATATACACGTGTATATATATGTGT---ATATATATACACGTGTATATATATGTGTATATATATACACGTGTATATATAT chr4 - 94230402 87985345 87985344 87985441 6244962 6244961 6245058 97 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGT ....:.:.....:...x....:....x:x..:.:.x:Xx.x.---::.x:..x:x..............x............:......x..:..:. 42M3I52M 67/93 72.0% 97/94230402 0.0% 3/94 3.2% 61383533 NA +3018 chr4 + 190214555 149410173 149410172 149410225 53 GCTCCATTTAAAACAAACAAACAAACAAACAAACAAACAAAAAACCCCACAGT chr4 - 94230402 76380026 76380025 76380078 17850325 17850324 17850377 53 GCTCCTTATTAAAAAAACAAACAAACAAACAAAAAACCGAAAAGCAGCACAGT .....x.x.x...x...................x..x.:....:.xx...... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 73030147 NA +3129 chr4 + 190214555 149442929 149442928 149442982 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 81790845 NA +3295 chr4 + 190214555 149442933 149442932 149442986 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 81790849 NA +3070 chr4 + 190214555 149442935 149442934 149442988 54 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 81790851 NA +3262 chr4 + 190214555 149443662 149443661 149443758 97 AAGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG--AAAGGAAAGGAAGAAAACT chr4 - 94230402 60992644 60992643 60992740 33237663 33237662 33237759 97 AAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAA--AAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACT ....:..:x..:.x.:::x...:.x........:....:...x:..--....x:.......x:.::x::...:.x..:--....:x..:.:........ 46M2D30M2I19M 64/95 67.4% 97/94230402 0.0% 4/95 4.2% 88451018 NA +3102 chr4 + 190214555 149449208 149449207 149449268 61 ATTTAACAAGTATCTATCAAAACAAACAAACAAACAACAAAAAAAAGCAAAACACCTTCAT chr4 - 94230402 29007694 29007693 29007754 65222649 65222648 65222709 61 ACTTAATATATATTTAAAAGCAAAAACAAACAAACAAAAAAAAAAAGCAGATAACCCTCAT .:....:.x:...:..xx.:x.x..............x...........:.xx...:.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 120441514 69773041 +3196 chr4 + 190214555 149454162 149454161 149454222 61 ATATATACACACACACACACACACACACACACACATATAAACACATACACACACAATTACA chr4 - 94230402 66904847 66904846 66904907 27325496 27325495 27325556 61 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATA ......::..::.........:...........:..x...::x..x::::.:.....:.:. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 82549315 NA +3005 chr4 + 190214555 149484106 149484105 149484170 65 TCCTGCTCTTTTTTTGTTTGTTTGTTTCCATTGGCATGGAATATCTCTTTCCATCCCTGAAATAC chr4 - 94230402 6902120 6902119 6902184 87328219 87328218 87328283 65 TCCTAATTTTTTTTTGTTTGTTTGTTTTCTTTTACATATATTATCTCCACTCCACTTTAAAATAC ....:x.:...................:.x..x:...:x.x......:x::.xx.::.:...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 142581986 47632569 +3145 chr4 + 190214555 149489764 149489763 149489827 64 TATATGTGTGTGTGTATATATATACACACACACATATATATG--CATATCTATAAACATATATTAG chr4 - 94230402 56650843 56650842 56650908 37579495 37579494 37579560 66 TATATGCGTGTGCATTTATATACATACACACACATATATATGGCCCAAGGTAAAGCCATATACTAG ......:.....::.x......:.:.................--.xx.xx..x.:x......:... 42M2I22M 50/64 78.1% 66/94230402 0.0% 2/64 3.1% 92838921 NA +3058 chr4 + 190214555 149502137 149502136 149502187 51 TAATTATATATATATACACACACACACACACACACATATATATGTATGTAT chr4 - 94230402 85546028 85546027 85546078 8684325 8684324 8684375 51 TAGCTATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ..::...x........:.........x.:.........x.xx.:....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 63956109 NA +3090 chr4 + 190214555 149502143 149502142 149502199 57 TATATATATACACACACACACACACACACATATATATGTATGTATGTACTTTTCCCT chr4 - 94230402 87372741 87372740 87372797 6857606 6857605 6857662 57 TATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCT ...x.x:.x...........x..........x....:.......:...:x.x.::.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 62129402 NA +3081 chr4 + 190214555 149502146 149502145 149502189 44 ATATATACACACACACACACACACACATATATATGTATGTATGT chr4 - 94230402 49987095 49987094 49987138 44243265 44243264 44243308 44 ATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGT ...........x..............:.:.:.:...:...x... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 99515051 90699504 +3124 chr4 + 190214555 149502669 149502668 149502715 47 CTCTCAAAAACCAAGCCAAACAAAACAACAACAAACAAACAAACAAA chr4 - 94230402 11540711 11540710 11540757 82689646 82689645 82689692 47 CCCACAAAAACCAAATCAAACAAAAAAATAATAAACAAACAAAAAAA .:.x..........::.........x..:..:...........x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 137961958 52252597 +3257 chr4 + 190214555 149554405 149554404 149554474 70 CTCCTGAGTTCAAGCGATTCTCATGTCTCAGCCCCTGGAGTAGCTGGGACTACAGGCACTCACCATCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...:.......:.x...x..x.x.......::.x:.........:......--.::x.....:::.. 54M2D14M 50/68 73.5% 68/94230402 0.0% 2/68 2.9% 131357266 58857289 +3198 chr4 + 190214555 149554652 149554651 149554714 63 TTTGTTTCTTAGCATATTTCATATTACACATTAATTTTTTCTTTTCTTTTCTTTCTTTTTTTT chr4 - 94230402 46802 46801 46864 94183539 94183538 94183601 63 TTTCATTTCTGGTAGAATTAATTTTAAATATTAGCTTTTTTTTTCCTTTTCTTTCTTTTTTTT ...xx..::.:.:.x.x..x..x...x.:....::.....:...:.................. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 149507850 40706705 +3224 chr4 + 190214555 149623706 149623705 149623768 63 TTCTGAATCCCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACATGTGCACAAGA chr4 - 94230402 7002306 7002305 7002368 87228035 87228034 87228097 63 TTCTAATTACCAGTAGTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATGA ....:.x.x....xx.........xx...........x.x..........x:::....:.x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 142621400 47593155 +3113 chr4 + 190214555 149639424 149639423 149639466 43 TTAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGGAGAAGGAG chr4 - 94230402 61793093 61793092 61793135 32437268 32437267 32437310 43 TTAACAAAAAAAAAAAAAGAAGAAGAAGAAGAGCCAGGAGGAG ....x...........................:xx..:..... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 87846331 NA +3111 chr4 + 190214555 149757727 149757726 149757774 48 TCCTGA-----TATTATATATGTGTGTGTGTGTGTGTGTGTGTGTATATTTCT chr4 - 94230402 27034812 27034811 27034864 67195539 67195538 67195591 53 TCCTGAGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATACCTTTCT ......-----..........:.:.................:.:..:x..... 6M5I42M 42/48 87.5% 53/94230402 0.0% 5/48 10.4% 122722915 67491640 +3140 chr4 + 190214555 149812431 149812430 149812499 69 TTCATTTTATCCATTC---TACCTTCTAGATCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACAC chr4 - 94230402 51342037 51342036 51342108 42888295 42888294 42888366 72 TTCTGTTTATCTTTTCATATGTACTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ...xx......:x...---.::x:.:..:......x................x........xx..x..x... 16M3I53M 53/69 76.8% 72/94230402 0.0% 3/69 4.3% 98470394 91744161 +3156 chr4 + 190214555 149841004 149841003 149841071 68 AAATATATATGTGTATATATATACACATACACACACACACACACACACACACACACACACACGATTAA chr4 - 94230402 14964823 14964822 14964890 79265513 79265512 79265580 68 AAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGA ......:.x..:..:.::.:.:::::..::.:.:...xx........::.............x:..:. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 134876181 55338374 +3296 chr4 + 190214555 149841008 149841007 149841078 71 ATATATGTGTATATATATACACATACACACACACACACACACACACACACACACACACGATTAAAAAGAAA chr4 - 94230402 8395804 8395803 8395874 85834529 85834528 85834599 71 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ...x.::.....x..:...:::..:.x:...:xx.:.................x....:.x.:..x.:... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 141445204 48769351 +3530 chr4 + 190214555 149841008 149841007 149841074 67 ATATATGTGTATATATATACACATACACACACACACACACACACACACACACACACACGATTAAAAA chr4 - 94230402 8395808 8395807 8395874 85834529 85834528 85834595 67 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA .:..:.:.x..:....:..::.x....:xx.:.................x.....x.:..x...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 141445200 48769355 +3030 chr4 + 190214555 149860464 149860463 149860519 56 TATGTATGTTTATATATGTATGTGTATATATGTAAGTATACATATATGTATACTTT chr4 - 94230402 68967416 68967415 68967471 25262932 25262931 25262987 56 TATTTCTGACTATATATGTGTAAGTATATGTGTAAATATACATATATTTACTTTTT ...x.x..x:.........:.:x......:.....:...........x..:x:... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 80893048 NA +3572 chr4 + 190214555 149860672 149860671 149860781 110 AAGTATACCTATGTGTATGTATATATATGTATGTGTGTATACATATATGTATGTGTGTGTATATATATATGTATGTGTATATATATAAAGAGGAG------TTTATTAAGTATTAA chr4 - 94230402 81401289 81401288 81401404 12828999 12828998 12829114 116 AAAGATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGGAAGTGCCTTTTTGTTATGTAGCAA ..:x...::.x.....x...:.x..x.x:...:.:::..x:x:..:.....x........:....x..:.x:..:..x..:..:.x.:..:.:..------...:...x...x:.. 95M6I15M 72/110 65.5% 116/94230402 0.0% 6/110 5.5% 68459383 NA +3723 chr4 + 190214555 149868378 149868377 149868528 151 GTTTATATTATATGTTTATATA---TGATAATATATA--AATATATATAATATATGTTTATATATTATAATATAATATATGTTTATAT--ATTATATGT-TATATATAACATAGTTATATGAGAAAATATTAAAAACTTTTATATAAAACATGTATTGT chr4 - 94230402 16155661 16155660 16155819 78074584 78074583 78074742 159 GTATATATTATACAGTATTGTAAATTTATAATATACAGTAAAGTATATAATATACATCTATATACTATCATACAATATACAATTATATAAATTACATATGGATGTATACAATTGCAATAAGAAGACAGTTTCCTGGCATGCATTAAATACATGATTTGT ..x.........::x.xx.:..---.x........:.--..x:...........::.:......:...x...:......::x......--....:..:.-x..:....xx..x.:x...x..::.x.xx..xxx::.x.x:..xx..x.....xx.... 22M3I12M2I49M2I9M1I59M 103/151 68.2% 159/94230402 0.0% 8/151 5.3% 133712717 56501838 +3205 chr4 + 190214555 149872129 149872128 149872193 65 TATATATGTGTGTGTGTGTGTGTGTATATATATATATATACCACCACCTTCCGAGTTTGCATGTG chr4 - 94230402 19559286 19559285 19559350 74671053 74671052 74671117 65 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtg ...x.x.x.x...............................x:.:.x:..::.x:.x.x.x.... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 130312843 59901712 +3424 chr4 + 190214555 149881094 149881093 149881270 177 AAGAAAGAAAGAAA--GAAAGAAAGAAAGAAAGAAGAAGGAAAGAAAGAAAAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAA-GGAAAGAA----------GGAAGGAAGGAAAGAAAGAAGGAAAGAAAGAAAGAAAGGAAGAAA--------GAAAGAGAAAGAAAAG chr4 - 94230402 30232147 30232146 30232344 63998059 63998058 63998256 198 AAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAGTTCAAGGCAATCATAGGTAGTATGTTTACTGTGAATGAGATGAACTGAAGGATGTGAAAAAGAAATCAAAAAGAAAAGTTTCTCTGAAAGAGAAGATAAAG ...:x....x..::--:..:.:x.:..:.:x::....x......:..xx..::....:..x..x.........:...x:x:.:..:.:......:::xxx..:.x..xx.-:.:x..x.----------.:.x.::.x...xx:...:.x.x:.:.......xx..::.::...--------.........::x.... 14M2I94M1I8M10I45M8I16M 109/177 61.6% 198/94230402 0.0% 21/177 11.9% 119648947 70565608 +3199 chr4 + 190214555 149881232 149881231 149881295 64 AAAGAAAGAAAGAAAGGAAGAAAGAAAGAGAAAGAAAAGAAAAGAAGGAAGGAAGGAAGGAAAA chr4 - 94230402 65171429 65171428 65171492 29058911 29058910 29058974 64 AAAGAAGGAGAGGGAGGGAGAAGGAAGAGGACAGAAGAGAAAAAAATAAAAGTAGACTGGAAAA ......:..:..::...:....:...:::..x....:......:..x:..:.x..:xx...... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 84709803 NA +3077 chr4 + 190214555 149895748 149895747 149895822 75 GCTATATATATATATATACACACACACACACACACACACACACACACACACACACACATATATACACACGCACAT chr4 - 94230402 66904838 66904837 66904912 27325491 27325490 27325565 75 GCTGTTTTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ...:.x.x:......:...::.........:...........:.:x:.x::x..x:::....:.xx..::.:... 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 82990910 NA +3230 chr4 + 190214555 149895751 149895750 149895859 109 ATATATATATATATACACACACACACACACACACACACACACACACACACACACATATATACACACGCACATATATATACATATATATA-----CACATATATACATATATAAA chr4 - 94230402 4417343 4417342 4417456 89812947 89812946 89813060 114 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAA ..x..x.:...................x:x...:..:..::x:x::x::....::...xx.x:..:x:.x.....:.:.:..x...x..-----....x.:.:xx.:....... 89M5I20M 70/109 64.2% 114/94230402 0.0% 5/109 4.6% 145478408 44736147 +3351 chr4 + 190214555 149895753 149895752 149895865 113 ATATATATATATACACACACACACACACACACACACACACACACACACACACATATATACACACGCACATATATATACATATATATACACATATATACATATATAAATATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x..x.:.....:.............x:x...:..:..::x:x::x::.....:...xx.x:.::x:.x.....:......x...x:.:..::-:...x.:.:x..:..... 94M1D18M 70/112 62.5% 112/94230402 0.0% 1/112 0.9% 145478410 44736145 +3112 chr4 + 190214555 149895755 149895754 149895846 92 ATATATATATACACACACACACACACACACACACACACACACACACACACATATATACACACGCACATATATATACATATATATACACATAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:...:.:.............x:x...:..:..::x:x::x::..:..:..:xx.x...:x..x.......:....x..:x:.... 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 145478412 44736143 +3079 chr4 + 190214555 149895773 149895772 149895884 112 ACACACACACACACACACACACACACACACACATATATACACACGCACATATATATACATATATATACACATATATACATATATAAATATATATATACACACATATATATAC chr4 - 94230402 4417349 4417348 4417457 89812946 89812945 89813054 109 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---CACAAACACTAACATATAAAC ...:.:.:.............x:x...:..:...:x:x::x::.:..::...xx.x:...x..x...:...:....x:..x....x::---:.:.x....xx.:.....x.. 88M3D21M 68/109 62.4% 109/94230402 0.0% 3/109 2.8% 145478424 44736131 +3158 chr4 + 190214555 149895782 149895781 149895828 47 CACACACACACACACACACACACATATATACACACGCACATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x.....::.:.:..:....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 62523035 NA +3259 chr4 + 190214555 149895786 149895785 149895854 69 CACACACACACACACACACATATATACACACGCACATATATATACATATATATACACATATATACATAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:...x.::..:...x.::..............::....:.x.......:x...:..:::.::.x:.. 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 142299374 47915181 +3120 chr4 + 190214555 149895865 149895864 149895922 58 ATATACACACATATATATACATATATATACACATATATACATATATATACTCACACAC chr4 - 94230402 7596413 7596412 7596470 86633933 86633932 86633990 58 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCAC ...:.x.::....:.x..::.....:.:..:...:......x.:.......:..:... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 142299452 47915103 +3025 chr4 + 190214555 149982841 149982840 149982901 61 TAGTTTAGCCTCGACTAGAAGTTAAAGGTTAAAAAGGAATAAGATTTAAGGGACAAATGGA chr4 - 94230402 51281388 51281387 51281445 42948958 42948957 42949015 58 TAGTTT---TCCAAATAAGAGTTAAAGGTTAAAAAAAAATAAAAACTAAAGGACAAATTGA ......---::.:.x..::................::.....:.x:...:........x.. 6M3D52M 45/58 77.6% 58/94230402 0.0% 3/58 5.2% 98701453 91513102 +3123 chr4 + 190214555 149995084 149995083 149995152 69 CAATAGGAAAA----AAGGAAGGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAAAG---AAAGAAAGAGAGAGAG chr4 - 94230402 87012011 87012010 87012086 7218317 7218316 7218392 76 CACTGGAAAAACCTTAGGGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAAG ..x.:.:....----.:.....:...x..:.......:..::..:...::.....:.---.......:.:.:.:.. 11M4I42M3I16M 51/69 73.9% 76/94230402 0.0% 7/69 10.1% 62983073 NA +3329 chr4 + 190214555 149995091 149995090 149995265 175 AAAAAAGGAAGGGAAGGGAGGGAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAA----AGAAAGGGAAGGAGGGAGGGGGAGGGAGGAAGGAAGGGGAAAA chr4 - 94230402 60992644 60992643 60992820 33237583 33237582 33237759 177 AAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAG--GGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGGGGAAAGGAGAGACGGATAAA ..:.:..:x.::.x..::x::..:x.:.:....:.:.--....:x....:.:x..::..:.x.::.x::.....x:..xx.:.:......:.::.:.xxx..x.x.x..:x.:x..:...x:..::.:.x.:----.....xx..::x...x....x.:..:.:.:..::.x..:x... 37M2D93M4I43M 97/173 56.1% 177/94230402 0.0% 6/173 3.5% 89002447 NA +3566 chr4 + 190214555 149995113 149995112 149995226 114 AGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAA chr4 - 94230402 30533172 30533171 30533285 63697118 63697117 63697231 114 AGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ......:...:..:..:..:.:.......xx.x..:.:..x:.::.xxx:.:.x:..:.xx:.x.x....::.x:.:..:...:.:..:...x.xx.:......:.:...x:.. 114M 69/114 60.5% 114/94230402 0.0% 0/114 0.0% 119461941 70752614 +3266 chr4 + 190214555 149995129 149995128 149995237 109 AGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAAAGAAAGGAAAAGAAACAAAGAAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGG chr4 - 94230402 30258265 30258264 30258373 63972030 63972029 63972138 109 AGACAAAAATTGAATGAACAAAAGAGAGAAAGAGAAACATTGAGAACTGAATGTGAAGAATTAAATACAGGGTAAATAAAGAAGAGGAAAACAATGAGAAGGAAAAGGG ..:x...:.xx...x..:x:.:.......:.:.....x:xx:....x::..x:x::....xx.:.x.x.::.x...x......:.......x..x..:.:....:::.. 109M 67/109 61.5% 109/94230402 0.0% 0/109 0.0% 119736864 70477691 +3604 chr4 + 190214555 149995155 149995154 149995317 163 AGAGAAAGAAAGGAAAAGAAACAAAG-----------AAAGAGAAAGAGAAAGAAAGGAAAGAAAGAAAA---------------GGAAAAGAAAGAAAGGGAAGGAGGGAGGGGGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAG--AAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAGAAA chr4 - 94230402 22272879 22272878 22273068 71957335 71957334 71957524 190 AGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGA-GAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA ...:x.:.x......:x.::.x....-----------x...........:.-..:..:...:........---------------....xx.xx.::.xx:.......x:.x.::xx::..:......:...:x...x.x......:.:.....--.....::x.:::.xx:.:..:x.:..x.xx..... 26M11I14M1D18M15I69M2I35M 106/162 65.4% 190/94230402 0.0% 29/162 17.9% 127722276 62492279 +3629 chr4 + 190214555 149995195 149995194 149995314 120 AGAAAGGAAAGAAAGAAAAGGAAAAGAAAGAAAGGGAAGGAGGGAGGG----GGAGGGAGGAAGGAAGGGGAAAAGAAAGAAAGAGGAAAAGAAAGAAAAAGAGCAAAAAAGAAAAAAGGAAAG chr4 - 94230402 40465777 40465776 40465900 53764503 53764502 53764626 124 AGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGTTTGAAACTAAACTAAAACAATACAAAAAGAG ....:...x::x.....x::......:x...:.:.x....:.::.x..----.........:.:::...::.::...::.:..:.:.x....xxx....xx:.:.x....x:.x.x..::.:.. 48M4I72M 74/120 61.7% 124/94230402 0.0% 4/120 3.3% 109529418 80685137 +3042 chr4 + 190214555 149995297 149995296 149995419 123 AAAAAGAAAAAAGGAAAGAAAGAAAGAGAAGAAAAAAGAAAAGAAAAGAAGAAAAGA---AAAGGAAGGAAGGAAGGGAAAGAAGGAAAGAAAAGAGGGAGGGAGGAGAGAGGGGGAGGAAGGAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAA---AAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:...::.:.......---.....::..:.:..::.xx.x:..:...x....:---..::x..:..xx...:x::.....x..:::....:..:..:::x:xx.::.:..:......x:.:. 20M3D34M3I66M 72/120 60.0% 123/94230402 0.0% 6/120 5.0% 119462133 70752422 +3063 chr4 + 190214555 149995338 149995337 149995399 62 AGAAAAGAAGAAAAGAAAAGGAAGGAAGGAAGGGAAAGAAGGAAAGAAAAGAGGGAGGGAGG chr4 - 94230402 10985357 10985356 10985418 83244985 83244984 83245046 62 AGAAAACACGACAGGAGACAGAGAAAATGAAAAAAAAATAGGAAAAAAAAAAGGGAGGGAGG ......x.x..x.:..:.x:..:::..x...:::...:x......:....:........... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 139009981 51204574 +3321 chr4 + 190214555 150017985 150017984 150018092 108 GAAAATGGAACACAAAGTCAAGACTTGGCAAATCAAAACAAAGAACAAATACACAAACAAAAAA-------AAAAGAGTGCAGTTATTAATTAGACTTGAGACTAGTAACAAGAT chr4 - 94230402 45586807 45586806 45586907 48643496 48643495 48643596 101 GAGGATGAAACAGAA------GAGTTAGCAAATCACAGCAAAAAACAAACAAACAAACAAAAAAAACACCCAAAAAAGTG--------GAATAGGCTTGGCCTGAGTTTCAAGAT ..::...:....x..------..x..:........x.:....:......:.x............-------....:....--------:.x...:....:xx:x...xx...... 15M6D43M7I9M8D27M 72/94 76.6% 101/94230402 0.0% 21/94 22.3% 104431178 85783377 +3036 chr4 + 190214555 150022646 150022645 150022686 41 AAAACAAAACAAAACAACAATAACAAAAAACCTAAACAAGT chr4 - 94230402 50017458 50017457 50017498 44212905 44212904 44212945 41 AAGACAAAACAAAACAACAACAACAAAAAACCCAACCCAGT ..:.................:...........:..x.x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 100005188 90209367 +3200 chr4 + 190214555 150029115 150029114 150029186 72 GGGCAATATAGTGAGAACCTGTCTTTAAAAAAAAAAAAAAAAAAAAAAAAGATAAGTTTAATAGAATTTAGT chr4 - 94230402 80007157 80007156 80007228 14223175 14223174 14223246 72 GGAGAATTCTGTAAGGGCGTATTTTTAGAAAAAAAAAAAAAAAGAGAAAAGAAAGAATTAATTAAAGTCAGT ..:x...x:x..:..::.x.:.:....:...............:.:......x.::x.....x:..x.:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 70021958 NA +3255 chr4 + 190214555 150035616 150035615 150035686 71 AATCAACAGGTTGTTTTTTTGTTTGTTTGTTTGGTTTTTTTTT-----TGAGATAGAGTTTTGCTCTTGTTGCCCA chr4 - 94230402 14714116 14714115 14714191 79516212 79516211 79516287 76 AATCAACAGGGTTTTTTGTTGTTTGTTTGTTTGTTTTTTCTTTTCAACTAAGCTGGAGCAGTTCTCTTTTCTTCCA ..........x.x....x...............x.....:...-----.:..x.:...:xx.x.....x.:x:... 43M5I28M 55/71 77.5% 76/94230402 0.0% 5/71 7.0% 135321500 54893055 +3547 chr4 + 190214555 150056876 150056875 150056975 100 TTCCTTCCTCTTCC-TCTACCCCCTCCACATTTTCCTCCT-CTTTTGTCCTCTTCCCTTCTCTCTCTCTCTCCTCCTGTCTCTCTCCCTACTCCCCTCCCCT chr4 - 94230402 86872030 86872029 86872128 7358275 7358274 7358373 99 TTCCTTCCTCTTCTGTCTGCATTCTA---ATTCTAATCCTTCCTAGGTCCTCTCCATTTTTCTCTCTCTTCTCTCCTTGCTCTCTCTCAAGTCCCTTCTCTT .............:-...:.x::..x---...:.xx....-.:.xx.......:.x:..:.........:::.....xx.......:.x.x....:..:.:. 14M1I11M3D11M1I61M 70/97 72.2% 99/94230402 0.0% 5/97 5.2% 63184846 NA +3116 chr4 + 190214555 150069271 150069270 150069388 118 CTGGGTAACAGAGTGAGGCCCTG---CCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAAGAAAGAAAATCTGGAGAAGAATAA chr4 - 94230402 56098425 56098424 56098545 38131858 38131857 38131978 121 CTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAA .....x..x..xxx..:.xx...---:.:x..x.:..::..x.:.:.:xx......x.:...:.........:...::x....:.:.::..:...:xx..:::..x..x::..:.:.x... 23M3I95M 72/118 61.0% 121/94230402 0.0% 3/118 2.5% 93970846 NA +3054 chr4 + 190214555 150069295 150069294 150069387 93 CTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAAGAAAGAAAATCTGGAGAAGAATA chr4 - 94230402 38898887 38898886 38898979 55331424 55331423 55331516 93 CTCAAAAAAAACCAAAAAAACAAAAATAAAAAAACCTGTGTAAAAACTGGTGAGCAAATGAAAATGGAGGAAAATAAAATCAGTAGAAGAATA ...........xx.......x.....x.:...:.xxx:x:x...:.xx:.x:.:x..:x.....x::.:::...x......x.x......... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 111170408 79044147 +3084 chr4 + 190214555 150069295 150069294 150069373 79 CTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAAGAAAGAAAA chr4 - 94230402 70253819 70253818 70253897 23976506 23976505 23976584 79 CTCAGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAA ....:...:.xx.::.......:..............x::.x:..x...::...:x.x...x:.:.x:.:x...x.... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 79815476 NA +3143 chr4 + 190214555 150069298 150069297 150069355 58 AAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ....:x.:.....:...............:..xx:...x....:.:.:.::.....:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 142357949 47856606 +3243 chr4 + 190214555 150069301 150069300 150069364 64 AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAA chr4 - 94230402 28315469 28315468 28315532 65914871 65914870 65914934 64 AAGACAAAAAAATAAAATAAAACAGTGAAAACAAGGAAGTAAAGAGAAGAACAGGAAAGAACAA ..:.x.......x....x....x.:x.....x..::...x.....:.....x..:......x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 121753832 68460723 +3132 chr4 + 190214555 150104354 150104353 150104453 100 CTCCAACCTG--GGTGCTGGTGACAAAAAAGACCACATCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGAGCATCTAATTCAAATATCTAATTGAA chr4 - 94230402 62907027 62907026 62907128 31323275 31323274 31323376 102 CTCAAACTTGCAGGTTTCTTTGACCTTAGAAATCATGTTTCCTAAAAAAAAAAAAAAAAAAGAAATGGAAGGGCAGGATTCTTCTTCTGATAGTCAAGTGAA ...x...:..--...x::xx....xxx.:.:.:..::.:......................:...x::..::x.::.xx...xx...x:...x::..x.... 10M2I90M 65/100 65.0% 102/94230402 0.0% 2/100 2.0% 87197327 NA +3827 chr4 + 190214555 150112886 150112885 150112958 73 CTGCAACCACTGCCTCCTGGGTTCAAGAGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..xxx:x..:...........x.x...x.:x.x........::.............:....x..... 73M 55/73 75.3% 73/94230402 0.0% 0/73 0.0% 131915760 58298795 +3426 chr4 + 190214555 150134807 150134806 150134892 86 CCCAAATCATGTTTGTTGTTGTTGTTGTTGTTTGTTTGTTTTTTTGAGACTGATGTGTTTTTTATTCCTTGCAGTGTTCCATTTCA chr4 - 94230402 2688641 2688640 2688722 91541681 91541680 91541762 82 CCCAGACTACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTTAAATGTTTTTTCTTCCTACCACT----CATTTCA ....:.::.:xxx.x.........................x....xx.x:.x.x:........x.....xx..x.----....... 75M4D7M 62/82 75.6% 82/94230402 0.0% 4/82 4.9% 147446166 42768389 +3158 chr4 + 190214555 150152357 150152356 150152435 79 CTGCAACCTCCACCTCCCCGGTTCAAGAGATTTTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCAC ..:..:..:xx.x..:.:x........x.x..:x.xx.x........::::...........:....x...--...... 71M2D6M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 131955231 58259324 +3035 chr4 + 190214555 150157482 150157481 150157539 58 ATGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGCTGGAG chr4 - 94230402 67798834 67798833 67798891 26431512 26431511 26431569 58 ATGGTTTTGGAGTTTTTCTGTTTGTTTGTTTGTTTTCTGGTTTTTTTTTGGAAAGGAG ........xxx....x.:.................x:.x....x......::xx.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 82358648 NA +3061 chr4 + 190214555 150177099 150177098 150177209 111 TGCCTTTAAACCCTGTCTTGTGTTATAATGTAGAATAAATCTCATATGATTTTGTTTTTCCTTCCTTTGCTTTGTTTTTTTAAAGGAACTCTTTCTATGAATCAGTGATTT chr4 - 94230402 41847464 41847463 41847569 52382834 52382833 52382939 106 TGGTCTTAAAGCCTTTCTTAC--TAAACCATACAAT---CCCAATCTATTTTCGTCTTCCCTTTCTTTCTTTTTTTTTTTTAATGGAACTTTGACTGTTAATTGTTGCTTT ..x::.....x...x....::--..x.x::..x...---:.:x..x.:x...:..:..:....:....x:...x.........x......:.xx..:.x...::x..x... 21M2D13M3D72M 71/106 67.0% 106/94230402 0.0% 5/106 4.7% 108329635 81884920 +3544 chr4 + 190214555 150195270 150195269 150195361 92 TATATTATATTATATATTATATTATATATTATATATTATATTATATATTATATTATATATTATATATATTATATAATATTATATATTATATA chr4 - 94230402 56109691 56109690 56109779 38120624 38120623 38120712 89 TGTATTATGGTTCACATTACTCT---CATAATTTGCTCTACTTTACATATTATTACATATTATGTATAGTGTATAATATTACATATTATGTA .:......:x.x:.:....:x:.---:..x..x.::.x..:.x..:..xx.....:.......:....x.:..........:.......:.. 23M3D66M 63/89 70.8% 89/94230402 0.0% 3/89 3.4% 94085579 NA +3591 chr4 + 190214555 150195301 150195300 150195459 159 TATATTATATTATATATTA-TATTATATATTA-TATATATTATATAATATTATATATTATATATATTATATAATATTATATAATATATATATTATATAATATTATATATTATATATATTATATAATATTATATATTATATA----TATAATATATATTAGATATA chr4 - 94230402 56109691 56109690 56109846 38120557 38120556 38120712 156 TGTATTATGGTTCACATTACTCTCATAATTTGCTCTACTTTACATATTATTACATATTATGTATAGTGTATAATAT---------TACATATTATGTAGTCTTATTTGTTCCCTATAAACAAAAATATTAACTAGTTTAGAAGTTTCTAAAGCATCTCAAATACA .:......:x.x:.:....-.x.:...xx..:-.x..:x...:...x.....:.......:....x.:........---------..:.......:..:.x....x.:..x:x....xxxx.x.......xx..x.x..x.----.x...x::..x.:.:...:. 19M1I12M1I43M9D56M4I20M 103/150 68.7% 156/94230402 0.0% 15/150 10.0% 94085610 NA +3427 chr4 + 190214555 150195386 150195385 150195439 54 TATATTATATAATATTATATATTATATATATTATATAATATTATATATTATATA chr4 - 94230402 56109726 56109725 56109779 38120624 38120623 38120677 54 TACTTTACATATTATTACATATTATGTATAGTGTATAATATTACATATTATGTA ..:x...:...x.....:.......:....x.:..........:.......:.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 94085660 NA +3071 chr4 + 190214555 150221296 150221295 150221367 72 CCATCCTCTTCTCCTTTCTTTGTTTTTTTTTTTTTTCTTTTTCTATCATCTTATATCCCCTGCCCCTTTCTT chr4 - 94230402 65356890 65356889 65356961 28873442 28873441 28873513 72 CCATCTTTTCCTTAACTCTCTTTTTTTTTTATTTTACTTTTAATACCATTTCTTCCTCCCTACTCTTTTCTT .....:.:.:..:xx:...:.x........x....x.....xx..:...:.:x.x::....:.:.:...... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 84864406 NA +3437 chr4 + 190214555 150274662 150274661 150274730 69 AACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCTTGGGCACATACACCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:....x.xx.:...:x.:..::x.x....:.......x......:..........:.:.x.:..... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 133891091 56323464 +3385 chr4 + 190214555 150334806 150334805 150335030 225 ATTAAGTTTTTTTTGTTTTGTCTTGGTTTTTTTTTTTTTTTTTTGACAGAGTTTCGCTCTGTCACCCAGGCTGGA----------------GTGTGGTGGTGCAACCTTGTCTCACTGCAACCTCCGTCTCCGAGGT-------TCAAGTGATTCTC----CTGCCTCAGCCTCCCTGGTAGCTGGAATTACAGGTATGCACCACCACACCTGGCTAAATTTTGTATTTTTAGTAGAGATGGGGTTTCGCCA chr4 - 94230402 76372535 76372534 76372786 17857617 17857616 17857868 252 ATGGGGTTTTTTTTGTTTTGGTTTGGTTTTTTTGGTTTTTTTTTTTAAAGGCTTCTTTCAGTATTCCAGATGGGCTTCTGGCTTTTTTTGTTTGTGGTACTTCATGTTTGTGTTAGAGAAAGTAGCTATTCCTTGGTAGTTAGATCTGTTGTTTTTCAGGTTTGTTTCTGCTTCTGTGGAGGAAAAAGTTGCACGCAGATACCACAAGGTGGAGCTGAATAACATATTCTCAGCAAATGCAGAATTTCCCTA ..x::...............x:...........xx.........xxx.::.:...x:..x..xx:....::x..x----------------x......:x.x..xx:....x.:.xx.x..x:xx.xx:...xx...-------..x:x..x..:..----:..::..x..:..:x...x:.xx::.:..:..x.:.x::.....x.x::xx:...:...xx::....:.:..:.:.x:::.::....x.:. 75M16I46M7I13M4I91M 132/225 58.7% 252/94230402 0.0% 27/225 12.0% 73962271 NA +3093 chr4 + 190214555 150335390 150335389 150335465 76 TGTATGTGTGGCTGTGTATATATATATACACACATATATACATATATATATACACGTATATATGTGT-ATATATGTG chr4 - 94230402 48167038 48167037 48167114 46063289 46063288 46063365 77 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATGGTAAATGTG .....:.:.x..::.:...:......x...:....:x.:.::.::x:...:...:...:.:....:.-:..x..... 67M1I9M 51/76 67.1% 77/94230402 0.0% 1/76 1.3% 102168352 88046203 +3449 chr4 + 190214555 150335452 150335451 150335527 76 TGTGTATATATGTGTATATATATACGTATATAT----GTGTGTGTATATATATATACACACACATATACGTATTATATAT chr4 - 94230402 37363040 37363039 37363118 56867285 56867284 56867363 79 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATAAAATAT ......:...:x........:..:.::.x....----....:.:.:.:...:...x........-...:....x.x.... 33M4I27M1D15M 58/75 77.3% 79/94230402 0.0% 5/75 6.7% 112972412 77242143 +3160 chr4 + 190214555 150335473 150335472 150335538 66 ATACGTATATATGTGTGTGTATATATATATACACACACATATACGTATTATATATGTGTGTATATA chr4 - 94230402 64360141 64360140 64360206 29870197 29870196 29870262 66 ATATGTGTTCATAGCAGTCCATATATATACACACACACATATATAAACTATTCATGTGTGAATATA ...:..:.x:..:xxx..x:.........:.............::x.:...x:.......x..... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 85975332 NA +5346 chr4 + 190214555 150349989 150349988 150350179 191 TACCTCTCTCAACACAGGATCAGTTATTGAATTCAGATTGACAGCTCCTTCATAGGTCAAGTAATAGAACACATTGAGGGCTCGGACAGCTTCTGGTCCTTGCTGTTTATAGCCAAAAATGAGATCAATCCATTGGTGAAGCTGGCAGGAAACAAATTCACTCTCCAGGGCCTGAA----AAAAGGTATACATTG chr4 - 94230402 45801804 45801803 45801995 48428408 48428407 48428599 192 TGTCTCTTTTAAT---GGATCATTGATGTTATATATATCCACTTGCCCCTCATAGAAGAGATGGTGAAAGACATTTACAGCTTCTACTGCAGCAGGACCTTGTTGTTTATAGCCGAAGATCAAATCAATCCACTCATGCAGATGTGCACTCACAAAGTCACATTCCAGAGCCTGAAATCCAAAGGACATGCATTG .::....:.:..:---......x.x..xxx..x:.x..:x..xxx:..:......:xx.::.::.::..x.....x.x:...:xx..x..xx.x..x.....:...........:..:..x.:.........:.x:..x..x..xxx:xxx.....x....x:.....:.......----...:.::..:..... 13M3D160M4I15M 122/188 64.9% 192/94230402 0.0% 7/188 3.7% 104548185 85666370 +3054 chr4 + 190214555 150364996 150364995 150365031 36 GTGTGTGTGTGTGTGAGAGAGAGAGAAAGAGAGAGA chr4 - 94230402 18982318 18982317 18982353 75248050 75248049 75248085 36 GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..........................:......::. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 131382678 58831877 +3362 chr4 + 190214555 150364996 150364995 150365047 52 GTGTGTGTGTGTGTGAGAGAGAGAGAAAGAGAGAGACAGGGTGTCACTTTGT chr4 - 94230402 18982316 18982315 18982366 75248037 75248036 75248087 51 GTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT-TTATTTTGT ...............x..........:........:x...:.-.:.:..... 42M1D9M 44/51 86.3% 51/94230402 0.0% 1/51 2.0% 131382680 58831875 +3377 chr4 + 190214555 150365085 150365084 150365160 76 CTGCAGCCTCGACCTCCTGAGCTCAAGTGATCATCTGGCTTCAGCCTCCCAAGTAGCTGG-ACTACAAGCATGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:.....:x:.x..:...:.:.......x.:xx.x..x:.......::...........-......x.::::.... 60M1I16M 54/76 71.1% 77/94230402 0.0% 1/76 1.3% 132167959 58046596 +3155 chr4 + 190214555 150372559 150372558 150372607 49 CCAAAAAAAAAAAAAAAAAGGAAAGGAAAAGAAAAAAAATCCAAAAGAT chr4 - 94230402 29816358 29816357 29816406 64413997 64413996 64414045 49 CTAAAAAAAAAAAAATAAAGGAGAGGAGGGGAAAAAAAACCAAAAACAT .:.............x......:....:::.........:.x....x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 120556201 69658354 +3139 chr4 + 190214555 150373152 150373151 150373191 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 131390837 58823718 +3102 chr4 + 190214555 150373154 150373153 150373189 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 68744090 NA +3353 chr4 + 190214555 150373154 150373153 150373193 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 131390839 58823716 +3316 chr4 + 190214555 150373156 150373155 150373191 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 68744092 NA +3567 chr4 + 190214555 150373156 150373155 150373195 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 131390841 58823714 +3102 chr4 + 190214555 150373158 150373157 150373193 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 68744094 NA +3353 chr4 + 190214555 150373158 150373157 150373197 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 131390843 58823712 +3196 chr4 + 190214555 150373160 150373159 150373206 47 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTAT chr4 - 94230402 18982315 18982314 18982361 75248042 75248041 75248088 47 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ..............x.x...................::..::x:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 131390845 58823710 +3140 chr4 + 190214555 150389875 150389874 150389934 60 GAATACAGAGATCTGGACTTCCATTTTTGTCTGGGTATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 58431182 58431181 58431241 35799162 35799161 35799221 60 GAAAGCACAAATTTGTATTTCCCTGTTTTTTTGGGGGTTTTTTTTTGTTTTTTTTTTTTT ...x:..x.:..:..x.:....x.x...x.:....x:.........x............. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 91958693 NA +3574 chr4 + 190214555 150415526 150415525 150415592 67 CCAAGATTATAATTATTGAAGTTGACAAACATCTCAGGGAGATAATAAAATTCAGGGATCAACTCCT chr4 - 94230402 45804542 45804541 45804608 48425795 48425794 48425861 67 CCGAGATCAAAATTGTTGGAATTGAGCAAGAACTCAGGGAGGTAGAAAAATTCTGGGATGAGCTCCT ..:....:.x....:...:.:....xx..x.x.........:..:x.......x.....x.:..... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 104610984 85603571 +3011 chr4 + 190214555 150445379 150445378 150445437 59 ATATATATATATATATATATATATATATATATACATATATACACACACACATATATATA chr4 - 94230402 17520753 17520752 17520811 76709592 76709591 76709650 59 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .......x.:.:.x...:.:...:..:.:x..:.x.:....x.....::.......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 132924626 57289929 +3067 chr4 + 190214555 150445385 150445384 150445444 60 ATATATATATATATATATATATATATACATATATACACACACACATATATATATGTTGTT chr4 - 94230402 86658093 86658092 86658152 7572251 7572250 7572310 60 ATATATCTATACATATACATATTTACCTATGGAGAAACATACACATGTTTATATGTTATT ......x....:.....:....x..:x:..:x.x.x...:......:.x........:.. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 63787292 NA +3165 chr4 + 190214555 150448781 150448780 150448871 91 AATAAGAGTGAAACAGTGTTTCAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAGAAGAATCTGCTAAAATTTATAAAGAA chr4 - 94230402 7660406 7660405 7660494 86569909 86569908 86569997 89 AACAACAACAAAAAATTGTCATAACTGAACAAAAAAAAAAAAAGGGGGGGGGGGGGGGGAGAAGGGGGAGGCT--TTAAAAGTATAATGAA ..:..x.:::...x.x...:x:..xx:..x............:..........x...x::...:.::..:x..--.x...xx.....x... 73M2D16M 61/89 68.5% 89/94230402 0.0% 2/89 2.2% 142788375 47426180 +3027 chr4 + 190214555 150448801 150448800 150448836 36 TCAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGG chr4 - 94230402 22079282 22079281 22079317 72151086 72151085 72151121 36 TTAAAAAAAAAAAAAAAGGAAAGGGGGGGGGGGTGG .:...............::................. 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 128369519 61845036 +3206 chr4 + 190214555 150448802 150448801 150448850 49 CAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAGAAGAA chr4 - 94230402 37794325 37794324 37794373 56436030 56436029 56436078 49 CAGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAA ..::...............::.......x.......x:...:.:..:.. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 112654477 77560078 +3304 chr4 + 190214555 150448804 150448803 150448851 48 AAAAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAGAAGAAT chr4 - 94230402 3486326 3486325 3486373 90744030 90744029 90744077 48 AAAAAAAAAAAAAAAAAAGGGGGGGGCGGGGGGGGAGGAGAGAGTAAT ..................:.......x...x...x....:...:x... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 146962478 43252077 +3147 chr4 + 190214555 150448806 150448805 150448853 48 AAAAAAAAAAAAAAAAAGGGGGGGGGGGTGGGCAGGAAAGAAGAATCT chr4 - 94230402 88558254 88558253 88558301 5672102 5672101 5672149 48 AAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAACTT ....................x.......x...:.:....:x.:..::. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 61890552 NA +3077 chr4 + 190214555 150470823 150470822 150470889 67 ATGGAAGCCCTCATTACTACACACACACACACACACACACACACACACACACACCACACACTAAATT chr4 - 94230402 8395822 8395821 8395888 85834515 85834514 85834581 67 ATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATT ...x.x...:x.....x..................x.....x.::x.:.x.x.x.x..x....x... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 142075001 48139554 +3286 chr4 + 190214555 150488882 150488881 150488940 59 ATAATATATACACAC--ACATAAGAATATATACACACACATAAGAATATATACACACACGA chr4 - 94230402 38535892 38535891 38535952 55694451 55694450 55694511 61 ACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGA .:.............--....:......:.:.:........:x.x..:...:..:...x.. 15M2I44M 47/59 79.7% 61/94230402 0.0% 2/59 3.4% 111952990 78261565 +3035 chr4 + 190214555 150537183 150537182 150537254 72 TACAACAAAAGTTTTAAAAAGTTGACAAAGATAAGCAATGGCGAAAGGACTGCCTATTTAATAAATAGTGCC chr4 - 94230402 8252881 8252880 8252952 85977451 85977450 85977522 72 TAGAAAAAAAATGTTAAAAAGAGTAAAAAGAAAAGAAACAATAAAAAGACTGCTTATGTAATAAACACTTCC ..x..x....:.x........xxx.x.....x...x..:::::...:......:...x.......:.x.x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 142284302 47930253 +3293 chr4 + 190214555 150557973 150557972 150558045 73 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGTCTCAGCACCCTGAGTAGCTGGAATTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx.x..:.::..........x...x..x.x......x:::::...........:....x.::.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 132360847 57853708 +3618 chr4 + 190214555 150562875 150562874 150562948 74 CTGCAGCCTTGAACTCCTGGGCTCCAGCAATCCTCTTATCTCAGCCTCTCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.:..:.....:..x..::x.:.x.xx:x........:............:......x.::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 132365749 57848806 +3307 chr4 + 190214555 150618831 150618830 150618897 67 TATGTATATGTGTGTATGTATATATATATATATATATAT----------ATACACACATACACACACATATATATAT chr4 - 94230402 8395789 8395788 8395865 85834538 85834537 85834614 77 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:...:........:..:x.:..:...x..:....:...----------.........:.........x.:.:.x.. 39M10I28M 52/67 77.6% 77/94230402 0.0% 10/67 14.9% 142223042 47991513 +3251 chr4 + 190214555 150639703 150639702 150639810 108 ACAAACTAGAAGATAATCTGAGCCTATGCCCCAAATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGT chr4 - 94230402 71630099 71630098 71630205 22600198 22600197 22600304 107 ACAAAGTAGAAGCAGATCAGGATTTTCACTATCACT-TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .....x......xx:...x.::::.x::.:x:x.x.-..::.::..::.....:.:.:.:.x.....:....x.x.:....::.....x.::..:.:x....:..... 36M1D71M 66/107 61.7% 107/94230402 0.0% 1/107 0.9% 79009604 NA +3062 chr4 + 190214555 150639726 150639725 150639846 121 CTATGCCCCAAATATATATATATATATATATATATATATAT---ATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 40224592 40224591 40224715 54005688 54005687 54005811 124 CTTTGTCAGAATTAAACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ..x..:.xx..x..x.:.:.:.x.:xx::.:..:....x.x---...:x....:....:.:xx.x.x...::.xxx:x.:.x..x.x...........:...:........x...:....:.:. 41M3I80M 76/121 62.8% 124/94230402 0.0% 3/121 2.5% 110415134 79799421 +3216 chr4 + 190214555 150639745 150639744 150639840 96 ATATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATATATATATATATATAT chr4 - 94230402 40224621 40224620 40224715 54005688 54005687 54005782 95 ACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT .:..:....x.xx..-...:x....:....:..xx.x.x....::xxx:x.:.x..x.x.:...........:..........x...:....:.:. 15M1D80M 65/95 68.4% 95/94230402 0.0% 1/95 1.1% 110415124 79799431 +3458 chr4 + 190214555 150639749 150639748 150639844 96 ATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 40224621 40224620 40224715 54005688 54005687 54005782 95 ACATGTATAAAGCTA-ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT .:..:....x.xx..-...:x....:....:..xx.x.x....:.xxx:x.:.x..x.x...............:........x...:....:.:. 15M1D80M 67/95 70.5% 95/94230402 0.0% 1/95 1.1% 110415128 79799427 +3050 chr4 + 190214555 150639768 150639767 150639842 75 TATATATATATATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTATATATATATATATATATATAT chr4 - 94230402 40224641 40224640 40224715 54005688 54005687 54005762 75 TATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ....:....:..xx.x.x....::xxx:x.:.x..x.x.............:.:........x...:....:.:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 110415127 79799428 +3073 chr4 + 190214555 150639798 150639797 150639862 65 TATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 35554958 35554957 35555022 58675381 58675380 58675445 65 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ..x......x..x.........:.:....:x:.:.........::...:.x.x..:.:..x.x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 115084840 75129715 +3426 chr4 + 190214555 150651924 150651923 150651991 68 GCCTTGATCTCCTGGGCTCAAGTGATTCTCCCACTTCAGCCTCCGAAGTAGCTGGAACCACAGGTGCA chr4 - 94230402 18197131 18197130 18197198 76033205 76033204 76033272 68 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ...:x:.x..:.....:.......x...x.xx:x:.......::x.............:...x..... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 132454793 57759762 +3098 chr4 + 190214555 150658560 150658559 150658634 75 TCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTGCCTCT chr4 - 94230402 58681569 58681568 58681643 35548760 35548759 35548834 75 TCTATTTCTCTGCATACTTCTAGGGTTTCCTCTGCTTCGTCCTCTTCCTTTGCCTCTACCTCTTCCTCTGCCTCT ...x::....:x:x.x.:...xxxx:.:.....x.:..x:.....:...:.x.....x.....:........... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 91976991 NA +3129 chr4 + 190214555 150658573 150658572 150658678 106 CTCCCTCTCCCTCTCCCTCTCCCTCTCCC-TCTCCCTCTCCCTCTCCCTCTCCCTCTGCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCC chr4 - 94230402 93177136 93177135 93177242 1053161 1053160 1053267 107 CTCCGTGTGCGTTTGTCTGTCTCCTTCCCATGTCTTTGCCCCTCTCCCCCTTCCTCTGGATTTCTATCTTTCTATCTCTCTTCTTTCCATGATCTCGTTCCCCTCCC ....x.x.x.x.:.x:..x..:.::....-.x..::.x:.........:..:......xx.:..:x...::..x..:....:.:.::.x:xx..:.x:....:::.. 29M1I77M 65/106 61.3% 107/94230402 0.0% 1/106 0.9% 57481437 NA +3139 chr4 + 190214555 150671021 150671020 150671060 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 131688706 58525849 +3102 chr4 + 190214555 150671023 150671022 150671058 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 69041959 NA +3353 chr4 + 190214555 150671023 150671022 150671062 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 131688708 58525847 +3316 chr4 + 190214555 150671025 150671024 150671060 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 69041961 NA +3467 chr4 + 190214555 150671025 150671024 150671063 39 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ....................................::. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 131688710 58525845 +3102 chr4 + 190214555 150671027 150671026 150671062 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 69041963 NA +3270 chr4 + 190214555 150671027 150671026 150671066 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................:x.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 131688712 58525843 +3201 chr4 + 190214555 150672474 150672473 150672573 100 TACAATTTCCTAATGCATTTTTATAAATAATTGTAGAAAAGCAATTTTTCATATATCAATCCTTTAGTATTCTAAA-GTTATTATAATTTATTTTTTTTAA chr4 - 94230402 35934640 35934639 35934740 58295663 58295662 58295763 101 TGCAACTTTCCTTTGCATGTTTTTAGATACTTGCAGAATAACAATTTCTAATATTTCTAAATTTTTGAATTCTAACTGATTTTAAAAGTTGCTTATTTAAA .:...:..:.:xx.....x...x..:...x...:....x.:......:.x....x..x.xx:...x.x.......x-.x.x...x..x..::..x...x.. 76M1I24M 69/100 69.0% 101/94230402 0.0% 1/100 1.0% 114737834 75476721 +3454 chr4 + 190214555 150685356 150685355 150685451 96 CATGGTGTATATGTACATGCATAAGG------------AATCAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681897 56681896 56682004 37548399 37548398 37548506 108 CATAATGTAAATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ...::....x..x..:..::.:..x.------------...:xxx:......x:.:....x:.:...:....:..x:.......x...x...x....x.......... 26M12I70M 68/96 70.8% 108/94230402 0.0% 12/96 12.5% 94003459 NA +3118 chr4 + 190214555 150685375 150685374 150685437 63 CATAAGGAATCAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 59607286 59607285 59607348 34623055 34623054 34623117 63 CAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAAAATCTGTTTTTTTTTTTT ..x..::..xx....:.:......:......xx.........x.x.x.:.x............ 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 91078089 NA +3555 chr4 + 190214555 150685378 150685377 150685444 67 AAGGAATCAAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735337 92735336 92735403 1495000 1494999 1495066 67 AAGTAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x..:.xxx.::....x.....:...:..:.:...............:.x.........:.x... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 57950041 NA +3155 chr4 + 190214555 150685386 150685385 150685435 50 AAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681934 8681933 8681983 85548420 85548419 85548469 50 AAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ............:...::.:.:.:...:.....xx.:............. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 142003452 48211103 +3258 chr4 + 190214555 150685386 150685385 150685450 65 AAATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865451 4865450 4865515 89364888 89364887 89364952 65 AAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTT ..:..x.x..............x.:x.x...x.x.x.:.........x..x....x......... 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 145819935 44394620 +3039 chr4 + 190214555 150685388 150685387 150685440 53 ATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:..........x.x..:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 57950037 NA +3056 chr4 + 190214555 150685390 150685389 150685437 48 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681936 8681935 8681983 85548420 85548419 85548467 48 ATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..........:...::.:.:.:...:.....x:.:............. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 142003454 48211101 +3253 chr4 + 190214555 150685390 150685389 150685442 53 ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:..........x....:.x.........:.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 57950039 NA +3471 chr4 + 190214555 150685391 150685390 150685452 62 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::....x.....:...:..:.:........x......:.x.........:.x...:::... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 57950043 NA +3068 chr4 + 190214555 150685393 150685392 150685448 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 57950045 NA +3121 chr4 + 190214555 150685393 150685392 150685446 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 146485119 43729436 +3704 chr4 + 190214555 150685495 150685494 150685582 88 ATCTTCTTGGC-TCA----CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCGACCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197107 18197106 18197199 76033204 76033203 76033296 93 ATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ....x......-...----..:..:..:xx:x..:...........::x...x.xx.x...::...::.:.........:......x...... 11M1I3M4I74M 65/88 73.9% 93/94230402 0.0% 5/88 5.7% 132488388 57726167 +3318 chr4 + 190214555 150689435 150689434 150689513 79 GTATCCCAGAACTTAAAGTATAATAAATAAATAAATAAATATTTTTAAAAAGTCCTAAAAGATTTAAAAAAAAAACAGA chr4 - 94230402 85977732 85977731 85977810 8252593 8252592 8252671 79 GTATCTTAATGTTTTGATTGTAATAAATAAATAAATAAATCTTTCTAAAATGACTGAAGAGAAATGAGGGACAAGCAGA .....::.:x::..x:.x.:....................x...:.....x.x.:x..:...xx.:.:::.x..:.... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 64711703 NA +4090 chr4 + 190214555 150724830 150724829 150724918 89 GACCCTGTCTCAAAAAATAAAATAAAATAAATTTAAATATATGTATATATATACATATATATATGTATATATATACACACACACACACA chr4 - 94230402 59708308 59708307 59708391 34522012 34522011 34522095 84 GACTCTGTTTAAAAAAACAACATAAAACAAA-----ACACATCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ...:....:.x......:..x......:...-----.:.:..x......:..xx.xx.x.x.:..........:...:........... 31M5D53M 65/84 77.4% 84/94230402 0.0% 5/84 6.0% 91016522 NA +3967 chr4 + 190214555 150724858 150724857 150724968 111 AAATTTAAATATATGTATATATATACATATATATATGTATATATA----TACACACACACACACACACATACATATAGCAGAAATTCTATAATTGA---AAAATGCAATAACATGCTG chr4 - 94230402 54293152 54293151 54293269 39937134 39937133 39937251 118 AAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATAGCAAAACCCAAATTATCAGGTTAAAAGGCACTTACCTGCTG ....x:.x..x...........:..::.:...:xxx....:..x.----.......x...::.........:........:..x::xx..x..:::---....x...x.x..x..... 45M4I47M3I19M 79/111 71.2% 118/94230402 0.0% 7/111 6.3% 96431706 93782849 +3254 chr4 + 190214555 150724868 150724867 150724929 62 ATATGTATATATATACATATATATATGTATATATATACACACACACACACACACATACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...x::..:...x.......:...::x..:..xx...................x.:...x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 142329064 47885491 +3337 chr4 + 190214555 150733565 150733564 150733617 53 CTCTCTCTCTCTCACACACACACACACACACACACCTCAAGACCCCAAGACAG chr4 - 94230402 81178149 81178148 81178200 13052203 13052202 13052254 52 CTCTCTCCCCTTCACACACACACACACATACACGCCTC-TGACCCCAGAGCAG .......:.::.................:....:....-x.......:::... 38M1D14M 43/52 82.7% 52/94230402 0.0% 1/52 1.9% 69555416 NA +3080 chr4 + 190214555 150737531 150737530 150737587 57 AAGAAAAGAAAGACGAAAGAAAGAGAGAGAGAAAGAAAAGCATTCTATCCTCAGTAA chr4 - 94230402 93470675 93470674 93470731 759672 759671 759728 57 AAGAAAAAAAAAAAGAAAGAAAAAGAGCGAGAGCAAAAAGCCTCTTAGTCTCATTAA .......:...:.x........:....x....:x:......x.::..x:....x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 57266856 NA +3454 chr4 + 190214555 150743043 150743042 150743115 73 CTGCAACCTCCGCTCCCTGGGTACAAGTGATTATCATGTCTCAGCCTCCCAAGTAGCTGGAATTACAGGTACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x:::......x......x..xx..x.x........::.............:....x..:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 132545917 57668638 +3110 chr4 + 190214555 150754512 150754511 150754560 49 CTGTCTCACCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATAAA chr4 - 94230402 76845946 76845945 76845994 17384409 17384408 17384457 49 CCGTTTCTTCTACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAA .:..:..x:.x.x................:...............:x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 73908566 NA +3111 chr4 + 190214555 150754515 150754514 150754554 40 TCTCACCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGA chr4 - 94230402 87676340 87676339 87676379 6554024 6554023 6554063 40 TCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGA ..::..................:.:.:............. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 63078175 NA +3157 chr4 + 190214555 150754517 150754516 150754567 51 TCACCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATAAAGTCTCTG chr4 - 94230402 25247403 25247402 25247453 68982950 68982949 68983000 51 TTACTATGGAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCTTG .:..:.x::...............:...........:.......:::::.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 125507114 64707441 +3101 chr4 + 190214555 150754520 150754519 150754560 41 CCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGATAAA chr4 - 94230402 48383079 48383078 48383119 45847284 45847283 45847324 41 CCATGGGAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAA ...x:::................:................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 102371441 87843114 +3092 chr4 + 190214555 150758560 150758559 150758600 41 TGATCTCTTTGTCTTTTTTTTTTTTTTTTTTTGAGAAAGGG chr4 - 94230402 67837415 67837414 67837455 26392948 26392947 26392988 41 TGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG ....:..x..:.........................:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 82921145 NA +3476 chr4 + 190214555 150770545 150770544 150770608 64 AAAAGAGGAAAGAAAACAAAGATTTTATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 60979346 60979345 60979409 33250994 33250993 33251057 64 AAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ...x:.x:...:x.......:.:.:........:.:...................x.x.x.x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 89791199 NA +3149 chr4 + 190214555 150780619 150780618 150780674 56 ATATATATACACGTATATATATATATATGTGTATATATATACGTGTGTGTGTGTAT chr4 - 94230402 19704274 19704273 19704329 74526074 74526073 74526129 56 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x..x.....::....::.......x.......:.x:..::...........x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 131076345 59138210 +3264 chr4 + 190214555 150803024 150803023 150803127 104 AAAAAAAAAAAAAAAAAAACTAAAAACAAAAACAAAAACAAACAAAAAAAAAATATATATACACACACACACACACACACACACACATATATACACACACAAAT chr4 - 94230402 37096243 37096242 37096339 57134064 57134063 57134160 97 AAAAGAAAAAAAGAACAAACTCAAAACAAAAACAAAAAAAATCAATCCACAATTCAACAAACAAACAATCAAACAACAACATCAAAATA-------ACACAAAT ....:.......:..x.....x................x..x...xxx.x..x.xx.:.x...x...xx..x...xxx...:xx.x...-------........ 89M7D8M 71/97 73.2% 97/94230402 0.0% 7/97 7.2% 113706781 76507774 +3158 chr4 + 190214555 150803032 150803031 150803102 71 AAAAAAAAAAACTAAAAACAAAAACAAAAACAAACAAAAAAAAAATATATATACACACACACACACACACA chr4 - 94230402 72680394 72680393 72680464 21549939 21549938 21550009 71 AAAAAAACAAACAAACAACAACAACAAAAAACAATAACAAGAAAGAATGTGTACATGTGTACACGTGTACA .......x....x..x.....x........xx..:..x..:...:x..:.:....:::::....::::... 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 78122638 NA +3583 chr4 + 190214555 150803046 150803045 150803104 59 AAAACAAAAACAAAAACAAACAAAAAAAAAATATATATACACACACACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA ....x..x..:...............xxxx.......:...:.:.:............. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 89823704 NA +3418 chr4 + 190214555 150803051 150803050 150803108 58 AAAAACAAAAACAAACAAAAAAAAAATATATATACACACACACACACACACACACACA chr4 - 94230402 60979343 60979342 60979400 33251003 33251002 33251060 58 AAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .....xx..x.x.......x.....x.x......:.....:.:.:............. 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 89823708 NA +3065 chr4 + 190214555 150803064 150803063 150803129 66 AACAAAAAAAAAATATATATACACACACACACACACACACACACACATATATACACACACAAATAT chr4 - 94230402 87372728 87372727 87372793 6857610 6857609 6857675 66 AAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x.:.......x...x.x:.x...........x.........:x:...::..:::..::.x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 63430336 NA +3107 chr4 + 190214555 150803067 150803066 150803131 65 AAAAAAAAAATATATATACACACACACACACACACACACACACATATATACACACACAAATATAT chr4 - 94230402 87372729 87372728 87372793 6857610 6857609 6857674 65 AGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT .:.:......xx...x.x..x...........x.........:x....:::.:::..:x...... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 63430338 NA +3095 chr4 + 190214555 150803089 150803088 150803160 72 CACACACACACACACACACACATATATACACACACAAATATATATATGTCTATATAAACATATATATTTCTT chr4 - 94230402 66904846 66904845 66904917 27325486 27325485 27325557 72 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCT ..:.:.:::..::...........:.:.......:.xx..x:.x:.x..x....:..x....:::.....:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 83898243 NA +5190 chr4 + 190214555 150805202 150805201 150805655 454 GGAAGGAAGGAAGGAAGGAAAGGAAAGGAAAGGAAA-AGGAGAAGGAAAGGAGAAGGAAACGAGAAGGAAAGGAAAGGAAAGGAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG--AAAGGAAAGGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGAAAGGAAGGGAAAAGGAAAGGAAGGGAAAGGAAAGGAA--AGGAAAGGAAGGAAAGGGAAA--------GGAAAGGAAAGGAAAGGAAAGGAAAGG--------AAAGGAAAGGAAAGGAGA--------AGGAGGAGAAAGAGAAGGAAAGGAAAAGGAAAGGAAAGGAAGGGAGAAGGAAAGGAAAGGAAAGG-----AAAGGAAAGGAAAGGAAAGGAAAGG--AAAGGAAAGGAA--AGGAAAAGAAAGGAAAGGAAAGGAAAGGAGAAGGAGAAGGAAAGGAAAGGAAAGGAA chr4 - 94230402 86597551 86597550 86598041 7632362 7632361 7632852 491 GGAAGGAAGGA-GGAAGTCCAGAAGTTGAAATGACACAAGAGAACTAAAACAGGAGGGATACAGCTGGATGTGCCAGCTGTGCACTGTGGTAGACATAGAGAATGAAATCAGGACGAGTTATGTAGAAGCTGTAGGAAAGAAGTCAATCAGGACATTAAAAGAAAGAGCAGAGCATGAAAAGAAAGAGCAGAGGGGGGTCAGTAAGACAGAATGTATGTGACATAGAAAGAATTAGATACAGAAGGAAGGGCACACATATCACAAGAAGTGAAGTAAGAGAAATGAGAAACTATCTCTGGGGTAGAGGAAAGGAGACTTATATGGTCAAGAGACAATGAAGAAAAGAAAAATGATTGAGCAAAAATGAATTAGTAGAGTAGAAGTTTTACTTCTGCAGAAAAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATGAAAGGGA ...........-.....xxx..:.:xx....x..x.-.:.....xx...:x..:...:.xxx..xx...x:x.xx..xx:x.x.xx:x.:x..:x.x:..:.:x:..:xx.:.:x:..xx.x.x.:.:.--:x.......:..xx::xx.:.:x.xx.....:..::.x.::.x.x.:..:.:..:..x.:...:::.xx..x:.:.x:...x.x.x.x..x.x::..:...--..:x.x:.......:..x.x.--------:::...x:...x..::....x..:.::--------:::.x.:...........--------:xx.:....x.:x....:....:....x..xx.::x.::..x.:.xx..x.:..x.:.:.xxxx:-----:x..:...:......x.:.:.....--:.......::..--..::x..xx..x:.......x.::.x:.x:::.:x.....:.....x.x......:. 11M1D24M1I92M2I101M2I21M8I27M8I18M8I65M5I25M2I12M2I57M 261/453 57.6% 491/94230402 0.0% 39/453 8.6% 64207651 NA +3525 chr4 + 190214555 150805338 150805337 150805432 95 GGAGAAGGAGAAGGAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGAAAAGGAAAGGAAAGGAAGGGAAAAGGAAAGGAAGGGAAAGGAAAGGAAAG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGA-AAAAGCAAAG ........::x::x..::.x:..:.....x.::....x:.:......x..:x:x.:.:...:..:..:.........::..::.-:....x.... 84M1D10M 61/94 64.9% 94/94230402 0.0% 1/94 1.1% 110339563 79874992 +3525 chr4 + 190214555 150805427 150805426 150805520 94 GGAAAGGAAAGGAAGGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA--------AAGGAG-AAGGAGGAGAAAGAGAAGGAAAGGA chr4 - 94230402 93301108 93301107 93301210 929193 929192 929295 103 GGGAAGGAAGGAGCAGATGGGGAAAGGAGGAGCAAGCCAGGGAGTGACAAGCAAGTGAGTGGATGTGTACGAAGGAGCAGGGAGGAGAGAGAGATGGAAAGGA ..:......:.::x:..x:.........:::.x...xx.:...:x.:x...x..:x..:x...--------......-.:........:.....x........ 63M8I6M1I25M 67/94 71.3% 103/94230402 0.0% 9/94 9.6% 57504319 NA +3988 chr4 + 190214555 150805544 150805543 150805715 172 AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAAAGGAAAGGAAAGGAAAGGAGAAGGAGAA-----GGAAAGGAAAGGAAAGGAAGGGAGAAGGAAAGGAAAAGAAAC---GAAAGGAAAGGAAAGGAGAAG-GAGAAGGAAAGGACCC chr4 - 94230402 60992644 60992643 60992824 33237579 33237578 33237759 181 AAGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAGGGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGGGGAAAGGAGAGACGGATAAAACCC .:..:..:x..:.x.:::x...:.x........:....:...x:..::.:x.:.::::.x...:x..:.:.:x.:.xx....:x:........-----:.x.x.x...x::x::..::x....::..x....xx......---..x...x.:..x::...:.:.-....x...x.::.... 93M5I42M3I21M1I16M 104/172 60.5% 181/94230402 0.0% 9/172 5.2% 89812900 NA +3243 chr4 + 190214555 150861188 150861187 150861250 63 AAACTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTAGAAATACAGGTGCA chr4 - 94230402 18197136 18197135 18197198 76033205 76033204 76033267 63 AAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:.....:.......x.:.x.xx:x........::::.......:...x....x..... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 132664052 57550503 +3085 chr4 + 190214555 150907253 150907252 150907317 65 AGGGAGGGAAGAGAGAAGGGGGGGAGAGGGGAGGGAGGGAGGAGAGAAGTGGGGGAGAGGGGGAA chr4 - 94230402 37794326 37794325 37794390 56436013 56436012 56436077 65 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAA ...:.:::..:.:.:..:......:.:x...x...:.....:.:.:..:x.....:.:..:::.. 65M 42/65 64.6% 65/94230402 0.0% 0/65 0.0% 113112927 77101628 +3083 chr4 + 190214555 150914351 150914350 150914406 56 AAAAAAAAAAAGGAATTAGGAAAAAACAAAAAAAAACTCCAGAAATAATAAAAACC chr4 - 94230402 48252439 48252438 48252494 45977909 45977908 45977964 56 AAAGGAAGAGAGAAATTTTGAAATAATAAAAAAAAGTTCTGGAAATAATAAAATCC ...::..:.:..:....xx....x..:........::..::............x.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 102661912 87552643 +3398 chr4 + 190214555 150954773 150954772 150954877 105 AAATTTTTTAAAAATTAAAAAAAAAAGAACCTAGACTCAGAAATCAAAAAAAAAAAAAAAAAAAAAGAATAAAAGGAACACCAAGTATATCATTTGACCATAAGG chr4 - 94230402 24753810 24753809 24753906 69476497 69476496 69476593 97 AAACTGTAGAAAAGTTAAGAAAAGTATG--------TCAGAAAGCCAAAAAAAAAAAAAAAGGAAGGAAGGAAAAGGATCCCTAGCATCCCTTCCTGCCATAAAG ...:.x.xx....:....:....:x.x:--------.......x.x...............::..:...x:...:.:.:x..x..:..x:.x.::x:......:. 28M8D69M 66/97 68.0% 97/94230402 0.0% 8/97 8.2% 126200963 64013592 +3116 chr4 + 190214555 150969160 150969159 150969219 60 TTCACGTTGTTTTCGTGCCTGTTAACATAACATCCATTTTGCAGCCCATAGTTCAAAATG chr4 - 94230402 59663454 59663453 59663513 34566890 34566889 34566949 60 TTTATGCTGTGTTCTGGTTTCTTAATATAACTTCCATTTTGCAGCCCGTAGCTTTAAGTG ..:.:.:...x...xx.::.x....:.....x...............:...:.:x..:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 91305706 NA +3693 chr4 + 190214555 150970526 150970525 150970574 49 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ......::.....:...:...:.x...................:..... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 125577266 64637289 +3440 chr4 + 190214555 150970528 150970527 150970576 49 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACAC chr4 - 94230402 25393260 25393259 25393308 68837095 68837094 68837143 49 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ......::.....:...:...:.x.....::............:..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 125577268 64637287 +3359 chr4 + 190214555 150970530 150970529 150970587 58 TGTGTGTGTGTGTGTGTGTGTGTGTGTACACACACACACACACACACACACACACACA chr4 - 94230402 14964826 14964825 14964883 79265520 79265519 79265577 58 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:...x..:.....:::::....:....:.:...xx........::............ 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 136005704 54208851 +3015 chr4 + 190214555 151002185 151002184 151002230 46 ACATAAAACAGCAAAAAAAAAAAAAAAAAAAAAAAAAGGGCACCTC chr4 - 94230402 55614942 55614941 55614987 38615416 38615415 38615461 46 ACATAAAAAAGTGAAAAAAAAAACAAAAACAAAAAAAGAGTACTTC ........x..::..........x.....x........:.:..:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 95387243 NA +3007 chr4 + 190214555 151005416 151005415 151005475 60 CAACAGTACAAGACTCCAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTATATA chr4 - 94230402 4203429 4203428 4203488 90026915 90026914 90026974 60 CATCAAAATAATTTTCCAACTTAGGAAAAAAGAAAAAAAAAAAAAGAAACATTGCATGCA ..x..:x.:..xx:.......:.::......:.............:....x:..:..::. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 146801987 43412568 +3186 chr4 + 190214555 151008972 151008971 151009051 80 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAAAATGGTATTTTTTTTTCTTATAC chr4 - 94230402 69437739 69437738 69437808 24792595 24792594 24792664 70 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-----TACATAAGTAA-----TTCTGTTCTTTCTCACAC .........x........:x...................x.-----..:...x:...-----.x:.x..:.....:.:.. 41M5D11M5D18M 57/70 81.4% 70/94230402 0.0% 10/70 14.3% 81571233 NA +3373 chr4 + 190214555 151054971 151054970 151055036 66 AAGACTTCATCTCTATTAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAAAAGC chr4 - 94230402 59685544 59685543 59685609 34544794 34544793 34544859 66 AAGATCTCATGCCTACAAAAATAGCAGGAGAAAGTAAAAGGGCAGGAAAGAAAGAAAGAAAAAAGC ....::....x:...:x....x.:x.::.:...:x.....::x..:.................... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 91369427 NA +3669 chr4 + 190214555 151064340 151064339 151064422 83 CTGTAGCCTCGACCTCCTGGTCTCAAGTGATCCTCTCACCTCAGCCTCTCAAGTAACTGGGATTACAGACATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..::....:x:.x..:....x:.......x.:.x.xx:x........:.......:....:.:...--..:........::.. 66M2D15M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 132867214 57347341 +3593 chr4 + 190214555 151070934 151070933 151071003 70 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGTGCCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:...........::x...x.xx.x........::.............:....--.:..::....::.. 54M2D14M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 132873795 57340760 +3300 chr4 + 190214555 151077649 151077648 151077740 92 TGGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGTTGGGATTATAGGTGTGC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:...x.:------..:..:..:xx:x..:.:.........:.x...x..x.x........::::.....:...:.:..:.x...::. 12M6D74M 58/86 67.4% 86/94230402 0.0% 6/86 7.0% 132880535 57334020 +3492 chr4 + 190214555 151101808 151101807 151101879 72 CTGCAACCTCCTCCTCCTGGGTTCAAGGGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xxxx..:...........x.x...x..x.x........::...........:.:....x.::. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 132904682 57309873 +3008 chr4 + 190214555 151115962 151115961 151116025 64 TATATGTATATACACGTATATATGTGTATGTATATATATGTGTATATGTGCATGTATATGTAAG chr4 - 94230402 30441814 30441813 30441877 63788526 63788525 63788589 64 TATATATACACACAGGTATATTTGTTTATGTATATATGTATGACTAATTCTAAGTATATATGAG .....:..:.:...x......x...x...........:.:..xx..xx.x:.x......:.:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 120674148 69540407 +3067 chr4 + 190214555 151115988 151115987 151116061 74 TATGTATATATATGTGTATATGTGCATGTATATGTAAGTATATATGTGTATATTACCACATATACATTTGTGTA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:....:...:x...:....::....::x....:.x:..:...........:.xx:....:.:.-..x...:.. 64M1D9M 51/73 69.9% 73/94230402 0.0% 1/73 1.4% 113752948 76461607 +3056 chr4 + 190214555 151116109 151116108 151116193 85 ACATACGTATGTGTATATGTATGTATATATTTAAAGTGTGTGTATGTGTATACACATATGTGTATATGTATATATGTGCATACAT chr4 - 94230402 70982597 70982596 70982681 23247722 23247721 23247806 85 ATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .:...::...x.:.x:.....xx.x.x.x::.x:x..............:....:..:.x::..x....:.:.:::.:..:.... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 80133512 NA +3174 chr4 + 190214555 151116137 151116136 151116195 59 ATTTAAAGTGTGTGTATGTGTATACACATATGTGTATATGTATATATGTGCATACATAT chr4 - 94230402 49414744 49414743 49414802 44815601 44815600 44815659 59 ATTTATATTGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACAT .....x.x..............x...x....::::.:..x:....:.:....:...:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 101701393 88513162 +3377 chr4 + 190214555 151116172 151116171 151116246 75 ATATGTATATATGTGCATACATATGTATAAATGCATGCATGTATACATGTATACGTATATATACATATACACATA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...:...:........x.:......xx.:::...:...:x.....xx....::.:.:.:...:.:.x...:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 142720384 47494171 +3383 chr4 + 190214555 151116393 151116392 151116454 62 ATACATATGCGTATACATTCATACACACATACATGTATACACACATACATATACACATACAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC .....x....:..:.x..x:...:.....::..........x.....:.:x...:..::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 143519980 46694575 +3059 chr4 + 190214555 151116403 151116402 151116469 67 GTATACATTCATACACACATACATGTATACACACATACATATACACATACACATATATACATATATG chr4 - 94230402 48167039 48167038 48167105 46063298 46063297 46063364 67 GTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .....:...xx:.:.:.::..:..:x.:.:...::x....:.:.x.........:..:....:.... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 102949364 87265191 +3230 chr4 + 190214555 151116420 151116419 151116489 70 CATACATGTATACACACATACATATACACATACACATATATACATATATGTATATATACACACACACACA chr4 - 94230402 8395787 8395786 8395856 85834547 85834546 85834616 70 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ...:::.....:::::....x.:..::.:x....:..:...:.x..:..xx...:.:............. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 142720633 47493922 +3206 chr4 + 190214555 151125481 151125480 151125557 77 CAAAACAAAA--CCAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGGAAGGAAAGGAAAGAAGGGAAAGAAAGGAAAGA chr4 - 94230402 32280597 32280596 32280675 61949728 61949727 61949806 79 CAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGA ....::....--...xx........................::...x.xx.:..:...x:.:.:x::..x.x.:..:.. 10M2I67M 55/77 71.4% 79/94230402 0.0% 2/77 2.6% 118844884 71369671 +3031 chr4 + 190214555 151125491 151125490 151125579 89 CCAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGGAA-GGAAAGGAAAGAAGGGAAAGAAAGGAAAGAAAGAAAGAGAGAGAGGCCGGGC chr4 - 94230402 62511304 62511303 62511392 31719011 31719010 31719099 89 CTAAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGG-CAGAAGGAAAGACAGAAGGGTAAGGC .:....:.x...:....:....:....x...::.x.:-:.xx..x...:..x.:.:..:....-x....:......x...::..:x:... 37M1I25M1D26M 60/88 68.2% 89/94230402 0.0% 2/88 2.3% 88614187 NA +3212 chr4 + 190214555 151129458 151129457 151129518 61 CTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGATTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:.........::x...x.xx.x........::.:.x.....:.:......x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 132932319 57282236 +3165 chr4 + 190214555 151131915 151131914 151131972 58 CCAGGTTCAAGCTATTTTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197142 18197141 18197199 76033204 76033203 76033261 58 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .::........:xx..:x.xx.x:........:...........:......x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 132934773 57279782 +3008 chr4 + 190214555 151143225 151143224 151143273 49 ATCTCAAAAAAAAAAAAAAAAATTCTAATTTTTTTTAGCTTCTATTTTT chr4 - 94230402 83275694 83275693 83275742 10954661 10954660 10954709 49 ATTTCAAAAAAAAAAAAAAAAAATCTGTCTTTTCTTGGCTTTCCTTTTT ..:...................x...:x:....:..:....::x..... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 67867531 NA +3104 chr4 + 190214555 151150179 151150178 151150257 79 CATCTCAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACATATATATATATACACACA chr4 - 94230402 45271650 45271649 45271728 48958675 48958674 48958753 79 CATCATGAGGAGAAAGATTGGAAAAATCACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ....x::.::.:...:.xx::.....xx.:xx.:x.x:....x..............:.:....:....:.x....... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 105878529 84336026 +3129 chr4 + 190214555 151150185 151150184 151150236 52 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACAC chr4 - 94230402 70707583 70707582 70707634 23522769 23522768 23522820 52 AAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ...x.:.....x.::....::..................:.:.:....::.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 80442602 NA +3236 chr4 + 190214555 151150185 151150184 151150239 55 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACA chr4 - 94230402 70707579 70707578 70707633 23522770 23522769 23522824 55 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..:....x.:.....x.::....x:x.................:........::. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 80442606 NA +3404 chr4 + 190214555 151150185 151150184 151150241 57 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACATA chr4 - 94230402 60979344 60979343 60979400 33251003 33251002 33251059 57 AAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA .....x..x.....x...x....xx.x........:.:.................:. 57M 47/57 82.5% 57/94230402 0.0% 0/57 0.0% 90170841 NA +3137 chr4 + 190214555 151150186 151150185 151150238 53 AAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACAC chr4 - 94230402 70707582 70707581 70707634 23522769 23522768 23522821 53 AAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ....x.:.....x.::....::x.................:.:......::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 80442604 NA +3275 chr4 + 190214555 151150187 151150186 151150241 55 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACATA chr4 - 94230402 70707579 70707578 70707633 23522770 23522769 23522824 55 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ..:....x.:.....x.::..x.x:x..........................:.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 80442608 NA +3017 chr4 + 190214555 151150190 151150189 151150228 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 81712451 NA +3044 chr4 + 190214555 151150213 151150212 151150259 47 ATATATATATATATATACACACACACATATATATATATACACACATA chr4 - 94230402 45922266 45922265 45922312 48308091 48308090 48308137 47 ATTTAAGTATATATATACACACACACATGTATTTAAAGACACACATA ..x..x:.....................:...x..x.x......... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 105227947 84986608 +3125 chr4 + 190214555 151150221 151150220 151150303 83 ATATATATACACACACACATATATATATATACACACATATATATACATATATATACACACACATATATATACATATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:..::::::..:.x.:..:...x....:.::...::x.....xx...:.........:.:.:.x...:.x..:x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 142754433 47460122 +3033 chr4 + 190214555 151150229 151150228 151150292 64 ACACACACACATATATATATATACACACATATATATACATATATATACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.:.:.:.x.:.:.x...:...:....:.:x..:.x.:....x.....::........... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 133629480 56585075 +3110 chr4 + 190214555 151150264 151150263 151150315 52 TACATATATATACACACACATATATATACATATATATATACACACACATATA chr4 - 94230402 28470366 28470365 28470417 65759986 65759985 65760037 52 TACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA .......:........x....:...::...:.:...:....x....x..x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 122679898 67534657 +3618 chr4 + 190214555 151150278 151150277 151150346 69 CACACATATATATACATATATATATACACACACATATATATATACATATATATATATATACACACACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:...x..::.....x..:...........:...:....:.x.......:x..:::.::...:.x... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 143553866 46660689 +3046 chr4 + 190214555 151150291 151150290 151150353 63 ACATATATATATACACACACATATATATATACATATATATATATATACACACACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x.....x.:.:.:...:..:::x..::x.:....x.....::.......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 133629542 56585013 +3106 chr4 + 190214555 151150325 151150324 151150371 47 ATATATATATATACACACACATATATATATATACATGCTCTTTATTC chr4 - 94230402 50184264 50184263 50184310 44046093 44046092 44046139 47 ATATATATATTTTCACACACACACACATATATAAATGCTCTTTGTCC ..........x.x........:.:.:.......x.........:.:. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 100966061 89248494 +3124 chr4 + 190214555 151152477 151152476 151152534 58 TAAAAATAATTCCCCAG-TTTTTTGCTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 50117629 50117628 50117687 44112716 44112715 44112774 59 TGGAAATGTCTTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .::....:x:.:..x..-:.x.x.::................................. 17M1I41M 46/58 79.3% 59/94230402 0.0% 1/58 1.7% 101034848 89179707 +3041 chr4 + 190214555 151152497 151152496 151152535 39 TTTGCTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4658099 4658098 4658137 89572266 89572265 89572304 39 TTTACTGTTCTCTCTCTCTCTTTTTTTTTTTTTTCTGTT ...:..:...........................:.x.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 146494398 43720157 +3103 chr4 + 190214555 151186764 151186763 151186815 52 ATATCTCTAACTCTAGAAAATGGTTACATAATTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 34819055 34819054 34819106 59411297 59411296 59411348 52 ATCTCTTTGTCCCTAGATAATTGCTACATGATTTTCTTTTTTTTTTTTTAAG ..x...:.:x.:.....x...x.:.....:.....:.............:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 116367709 73846846 +3080 chr4 + 190214555 151195375 151195374 151195420 46 AAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAGAGTTAACC chr4 - 94230402 24737896 24737895 24737941 69492462 69492461 69492507 46 AAAAAAAAAAAAAAGGAAAAACAGGAAATGAAAAGGAGAATTAACC ..............::.....x..:...x.....::...:...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 126457479 63757076 +3257 chr4 + 190214555 151222632 151222631 151222690 59 ATTTGGTTGTTAATATCTCTTTGGTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 21634143 21634142 21634201 72596202 72596201 72596260 59 ATTTACTTATATATATCTTTATGTTCTCTCTCTCTCTTTTTTTTTTTTGTATATCTTTT ....:x..:.xx......:.x..x........................x.x.x.:.... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 129588489 60626066 +3228 chr4 + 190214555 151248087 151248086 151248151 65 AACTGTAAGGTATTTTTTAATGTTTTACTTTTTTTTTTTTGTTTGTTTGTTTTTGTTTTTAGAGA chr4 - 94230402 61843690 61843689 61843754 32386649 32386648 32386713 65 AATTAAAATGTGCTTTCAAGTATTATATTTCTGCTTTTTTGTTTCTTTGTTTTTGTTTTTAAGGA ..:.:x..x..::...:x.:.:..x..:..:.x:..........x................::.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 89404397 NA +3071 chr4 + 190214555 151253731 151253730 151253788 58 ACTCCGTCTCAAAAAAAAAAAAAAA----CAAGAAAACAACAACAACAACAACAACAAAAAA chr4 - 94230402 12295659 12295658 12295720 81934683 81934682 81934744 62 ACTTTTTCTGGGGAAAAAAAAAAAATCCACAAAAAAAACCCAACAACAACAACAACAAAAAA ...::x...x:::............----...:....xxx...................... 25M4I33M 47/58 81.0% 62/94230402 0.0% 4/58 6.9% 138958072 51256483 +3373 chr4 + 190214555 151253742 151253741 151253786 45 AAAAAAAAAAAAAACAAGAAAACAACAACAACAACAACAACAAAA chr4 - 94230402 88049167 88049166 88049211 6181192 6181191 6181236 45 AAAAAAAAAAAAAGCAAGAAAATATAGACAACAACAACAACAAAA .............:........:.xx:.................. 45M 40/45 88.9% 45/94230402 0.0% 0/45 0.0% 63204575 NA +3391 chr4 + 190214555 151273593 151273592 151273680 88 AAAAAAAAAAAAAAAAAAAAAAGAAGTCCAAAGACCTGGGACAACCACAAAATCCTCAGAGGGAAAGGACTCTCTGGTCAAGTTTTTT chr4 - 94230402 34368436 34368435 34368522 59861881 59861880 59861967 87 AAAAAACCAAAAAAAAAAAAAACCCCTTTAAAGGCCCAAAAAAACCCCAAAACCACCA-AGGGAAAGGGCCCACCCACCAAACTTTTT ......xx..............xxxx.::....:..::::.x....x.....:.x:..-.........:.:.x.:x::...::..... 58M1D29M 60/87 69.0% 87/94230402 0.0% 1/87 1.1% 116905157 73309398 +3213 chr4 + 190214555 151310535 151310534 151310594 60 ACTTCTGGGTATATATCCAAAGGAAATAAATCACTCTCTCTCTCTCTTTTTTTTTTTTTT chr4 - 94230402 50117624 50117623 50117683 44112720 44112719 44112779 60 ACTCCTGGAAATGTCTTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTT ...:....:x..:.x.:.x...:xx:.:x..:.:.......................... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 101192911 89021644 +3775 chr4 + 190214555 151310647 151310646 151310720 74 CTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCATGCCTTGGCCTGCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:...........x...x..x.x..::....x:::.........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 133113521 57101034 +3138 chr4 + 190214555 151332876 151332875 151332949 74 CTGCAACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x:.:.::........::x...x.xx.x....:...::::.........:......x.:.... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 133135750 57078805 +3025 chr4 + 190214555 151339179 151339178 151339248 70 AAAAAAAAAAAAAAAAACAAAAAACCCCAAAACAAAAACAAACAAAAACAAAAAACACCAACACCAGTGC chr4 - 94230402 84719673 84719672 84719742 9510661 9510660 9510730 70 AAAAGAAAAAAAACACACAAAAACCACTAAAATACAAACCAACACATACATAATCTATCAACAACACTAC ....:........x.x.......x.x.:....:.x....x....x.x...x..xx:.:.....x..x.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 66619506 NA +3160 chr4 + 190214555 151339180 151339179 151339251 72 AAAAAAAAAAAAAAAACAAAAAACCCCAAAACAAAAACAAACAAAAACAAAAAACACCAACACCAGTGCTCA chr4 - 94230402 78010646 78010645 78010717 16219686 16219685 16219757 72 AAAAAAAAAATACAGACACAAACCACCACCTGAGAACAAAACAACAACAAAAAACACCACCACCAAAACCCA ..........x.x.:...x...x.x...xxxx.:..xx......x..............x.....:x:.:.. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 73328534 NA +3029 chr4 + 190214555 151349056 151349055 151349106 51 TGAGACCCTGTCCCCCAAACAAACAAACAAACAAACAACAACAACAACAAC chr4 - 94230402 6701277 6701276 6701327 87529076 87529075 87529126 51 TGGGAAGCTGTCATTCCAACAAACAAATAAACAAACAACAACAAAAAAAAC ..:..xx.....x::.x..........:................x..x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 144647779 45566776 +3117 chr4 + 190214555 151349071 151349070 151349116 46 CAAACAAACAAACAAACAAACAACAACAACAACAACAAACCCCTAC chr4 - 94230402 20093825 20093824 20093870 74136533 74136532 74136578 46 CAAACAAACAAAAAACCCAACAACAATAACAACAAAAAACCCCCGC ............x..x.x........:........x.......::. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 131255246 58959309 +3015 chr4 + 190214555 151349072 151349071 151349110 39 AAACAAACAAACAAACAAACAACAACAACAACAACAAAC chr4 - 94230402 28228777 28228776 28228815 66001588 66001587 66001626 39 AAACAAACAAACAAAAACTCAACAACAACAACAACAAAC ...............x.xx.................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 123120295 67094260 +3044 chr4 + 190214555 151349076 151349075 151349109 34 AAACAAACAAACAAACAACAACAACAACAACAAA chr4 - 94230402 79230836 79230835 79230869 14999534 14999533 14999567 34 AAACAAACAAACAAACAATAACAACAACAACAAA ..................:............... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 72118240 NA +3703 chr4 + 190214555 151357056 151357055 151357129 74 CTGCAGCCTCCGCCTTCCAGGTACAAGCAATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:xx:x....::...x....::x...x.xx.x........::...........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 133159930 57054625 +3058 chr4 + 190214555 151389338 151389337 151389397 60 AAAAAAGAAAAAAGAAAGAAGAATAAAATAAAGGTATATATATACATACACATACATATA chr4 - 94230402 24170079 24170078 24170138 70060265 70060264 70060324 60 AAAAAAGAAAAAAAAAGGATTGTTTTAATATAAGTAAATGTACACATACACACACATACA .............:..:..xx:x.xx....x.:...x..:..:.........:.....:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 127219259 62995296 +3187 chr4 + 190214555 151390077 151390076 151390198 122 CTCTCCCTCTCCCTCTCCCTCTCCCTCTC------CCTCTCCC--TCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCCCTTCCCACGGTCTCCTTCC chr4 - 94230402 71961926 71961925 71962055 22268348 22268347 22268477 130 CCCGCTCGCCCCCTCCGCGACTCTTTCTTAAAGCGCCTTTCCCAAGAGCCCTCTCCCTATATTTCTTCTTTTCTGTCTCCCCCCGCTTTAAACTCGCCCGCGTCCTCCTCGCTTCCCACCTTCACCCGCC .:.x.:.x.:.....:x.xx...::...:------...:....--xxx..........x.x::...:.:.:..:x......:.:x.:.:xxx...x...x.x:.....:.x........xx..x..:x.. 29M6I8M2I85M 78/122 63.9% 130/94230402 0.0% 8/122 6.6% 79428151 NA +3389 chr4 + 190214555 151390088 151390087 151390205 118 CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCCCTTCCCACGGTCTCCTTCCACGGTCT chr4 - 94230402 77208611 77208610 77208728 17021675 17021674 17021792 118 CCTTCCTCACTGCCTCTTCTGCTTCCCCCCCCTCCCCCTCCTCATATAAACTTCCTTCCCCTTCCCCTTTGCATTTAGAATCTCCCCCCATCCTGCTTAAGGGCCCACTCTACTCTCT ...::.:.x..x.....:.:x..:..:.:.....:.....::.x.x.xxx::...:..:..:..:..:.:x.x:.:xxxx......:..x:...x.::.x..x.:.x:..:..xx... 118M 69/118 58.5% 118/94230402 0.0% 0/118 0.0% 74181477 NA +3002 chr4 + 190214555 151412668 151412667 151412706 39 TCTCTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTTTGAT chr4 - 94230402 18929912 18929911 18929950 75300453 75300452 75300491 39 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGT .:...........:...:.:.................:. 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 132482756 57731799 +3460 chr4 + 190214555 151438441 151438440 151438567 127 TCTTTTCATTGTATTTCTCTCTCCCTTTCCCTCATCTGAAAACCAAAAGTATGGGATTTGTTTAAC----TAAAAAACAAAAAAACAAAACAAAACAAAAAAATCTACCTCACCAGAATTATTTATTTATT chr4 - 94230402 25002819 25002818 25002947 69227456 69227455 69227584 129 TCTTCTCCAAAGATTTTTTTTTTCATTTT--TTATCTTGGATACAGAAATAATGAAGAAGCTTGACAATAGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCATTCATTCATT ....:..xxx:x....:.:.:.:.x...:--.:....x::.xx..:..:..xx.:.xxx.:..:..----x..........x.....................:.:..x:xxxx.:x..:...:...:... 29M2D35M4I61M 82/125 65.6% 129/94230402 0.0% 6/125 4.8% 126435622 63778933 +3019 chr4 + 190214555 151453879 151453878 151453950 72 AACAAAAACAAAAACAAAACAAAACAAAAACACCAAAAACCACGATTTATAATTTTTCATAGTATTTCATCC chr4 - 94230402 30284262 30284261 30284333 63946070 63946069 63946141 72 AATAAATACAAAAACAAAACAAAACAAAAACAGTGAAAATAACATTGTACTAGAGCTCATGGCTATACATCC ..:...x.........................x::....:x..:x.x..:x.xxx:....:.:xx.x..... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 121169617 69044938 +3105 chr4 + 190214555 151471315 151471314 151471382 68 TTTTCCAATAAGGAAAAAAAAAAAAAGAAAAAACCACCAAAACAGCACTCTGAATCTCTTCTTCCTAT chr4 - 94230402 40178423 40178422 40178490 54051913 54051912 54051980 68 TTTTCTAATAGGAAAAAAAAAAAAAAAAAAGGATTACTTGAACAAATTTTTCTGTCTTTTTTTTCTAT .....:....:.:.............:...::.::..:x:....:xx:.:.xx:...:..:..:.... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 111292892 78921663 +3020 chr4 + 190214555 151502314 151502313 151502366 53 CTCAAAAAACAAACAAACAAACAAACAAACAAACAAACAAACTAAAGGAAATC chr4 - 94230402 51198561 51198560 51198613 43031790 43031789 43031842 53 CTCCAAAAAAAACCAAAAAAATAAACAAACAAACAAAAAACCACAAGGAAACC ...x.....x..x....x...:...............x..x.xx.......:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 100303753 89910802 +3717 chr4 + 190214555 151510180 151510179 151510262 83 CTACAGACTCAAGCTCCTGGGTTCAGGTGATCCTTCCACCTCAGCTTCCTGAGTAGCTGGTACCACAGATGCATGCCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ......x.:x.....:.........:...x.:.x:xx:x......:.::::.........x..:...x:....--........ 73M2D8M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 133313054 56901501 +3034 chr4 + 190214555 151539556 151539555 151539607 52 TCTGTCTAAAAAAAAAAAAAAAAAAAAAAAATACAGTGGACGTTCTCTTAAC chr4 - 94230402 76023593 76023592 76023644 18206759 18206758 18206810 52 TTTATTCAAGAAAAAAAAAAAAAAAAACAAATAAAGCGGACACTTTCTCAGC .:.:.::..:.................x.....x..:....::.:...:.:. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 75515963 NA +3790 chr4 + 190214555 151580933 151580932 151581015 83 CTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCATGCCTCAGTCTCCCAAATAGCTGGGACTACAGGCGTGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:...........x...x..x.x.....:..::...:.......:......--....::....:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 133383807 56830748 +3214 chr4 + 190214555 151591031 151591030 151591106 76 ATGAATTTTTTTCCTTCTTAATTAATTTTCTCCCTGTT-CTCTGTCTGTTTTTTGTTGGTTTGCTTTTTTTTTTTTT chr4 - 94230402 19777963 19777962 19778038 74452365 74452364 74452440 76 ATGAACTTTATTTTTTTTTTCCTA-CTGTGGCCCTGTTATTCTGTTTGGTTTATGTTTGTTTGCTTTTTTTTTTTTT .....:...x..::..:..xx:..-:.x.xx.......-:.....:..x...x....x................... 24M1D13M1I38M 58/75 77.3% 76/94230402 0.0% 2/75 2.7% 131813068 58401487 +3027 chr4 + 190214555 151616420 151616419 151616467 48 AGACAAATATATCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 72884648 72884647 72884695 21345708 21345707 21345755 48 AGACAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTG .....:x:x.:..::....:...............:.........:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 78731772 NA +3250 chr4 + 190214555 151638334 151638333 151638377 44 TGTGTGTGTGTGTATGTGAGAGAGAGAGAGAGAATTGGAGAATT chr4 - 94230402 18982315 18982314 18982358 75248045 75248044 75248088 44 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATT .............:...................:xx.:..:... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 132656019 57558536 +3018 chr4 + 190214555 151697919 151697918 151697959 41 AAAATCGATTTCATATATATGTGTGTGTGTGTGTGTATATA chr4 - 94230402 27034817 27034816 27034857 67195546 67195545 67195586 41 AGAATTTATTATATATATATGTGTGTGTGTGTGTGTATATA .:...:x...x:............................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 124663102 65551453 +3376 chr4 + 190214555 151715767 151715766 151715884 118 CTCTGCAATGTTGTTGGTCGTATATTTATATTTGGTTGGGGGCTCATCAAAGAATCCAAGGAAAATTCTAAACAAACAAACAAACAAACAACAACAACAAAAAAACAGGGTTGCAAAA chr4 - 94230402 34555058 34555057 34555166 59675237 59675236 59675345 109 CTTTAAATTTTTGATGATTGAATTTATAATTATGGTTAGTG-CTAATCATA------AAGGAAAACGGTAAAAAAACAAACAAACAAAAAACAACAAC--AACAACAGTATGCCAAAA ..:.:x.x.x...x..:.:.x..x.x..xx.x.....:.x.-..x....x.------........:xx....x...............x.........--..x.....x:.xx..... 41M1D9M6D41M2D18M 81/109 74.3% 109/94230402 0.0% 9/109 8.3% 117160709 73053846 +3268 chr4 + 190214555 151715825 151715824 151715870 46 AGGAAAATTCTAAACAAACAAACAAACAAACAACAACAACAAAAAA chr4 - 94230402 21619670 21619669 21619715 72610688 72610687 72610733 46 AGAAGAATTTAAAACAAACAAACAAACAAAAACCAACAACAAAAAA ..:.:....:x...................x.x............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 130096155 60118400 +3055 chr4 + 190214555 151769295 151769294 151769335 41 TCACTCTCTCTCTCTCTCTCTATATATATATATATAATATA chr4 - 94230402 9598916 9598915 9598956 84631447 84631446 84631487 41 TCACTGTATCTCTCTCTCTCTCTATATATATATATAGTATA .....x.x.............x..............:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 142170379 48044176 +3218 chr4 + 190214555 151769430 151769429 151769507 78 ATATGTGTGTGTGTATATATATATGTATATGTGTATATATATATATAT--ATATATATATATATATACATACACATATAA chr4 - 94230402 8395788 8395787 8395867 85834536 85834535 85834615 80 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA ..:.....:.....::...x.:......x.:::...:...::x..:..--...:.:.:.:.:.:.:...x.....x..:. 48M2I30M 53/78 67.9% 80/94230402 0.0% 2/78 2.6% 143373642 46840913 +3355 chr4 + 190214555 151769439 151769438 151769521 83 TGTGTATATATATATGTATATGTGTATATATATATATATATATATATATATATATACATACACA-----TATAATATAGTCATTTGGA chr4 - 94230402 37363040 37363039 37363127 56867276 56867275 56867363 88 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATATTAAGCTGGA ......:...:x.:.:....::..:.:.x......xx:.:.....:.:...:...x..:.....-----.....x...x.x.x:.... 64M5I19M 59/83 71.1% 88/94230402 0.0% 5/83 6.0% 114406399 75808156 +3011 chr4 + 190214555 151836319 151836318 151836388 70 CTTTTTTTGTACTACCTTTTGTTTGTTTGCTTGTTTTTTGATTGGTTGGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 81634888 81634887 81634957 12595446 12595445 12595515 70 CTTTTTTTTTGTAGTTGCTGGGTTGTTTTTTTGTGTTTTGGTTGGTTGGTGGTTTTCTTTTTTTCCCCTT ........x.::x:::x:.x.x......x:....x.....:.........xx....:.......::::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 70201431 NA +3474 chr4 + 190214555 151888828 151888827 151888907 80 CCTTATTAACTGTGTGACTTTGGGCAAATCACTTTACCTCTCTAAGGCTCAATCTCCATATCTGTAAGATAAGGATAATA chr4 - 94230402 11947206 11947205 11947285 82283118 82283117 82283197 80 CCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA ...:.:............:..:..:x.:......x.:..x:..:x.x.:..:.:...x:..x.:.:.:..:.xx...... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 139941622 50272933 +3446 chr4 + 190214555 151973932 151973931 151974088 157 CTCTTATAACAACTTCATAGATTTTACTGCTCC---TTCCCTTATTTATCTCCACTAGGAACATTTTCATCAAAACTGGGTATTTGGTGCTTAAGAGTTCTCCTGACACTGCTTCTTACTCACCAA---ATAGAGACATAATCCTTAGTATGTAACTTCAAAA chr4 - 94230402 40524621 40524620 40524782 53705621 53705620 53705782 162 CTTGTATAACACTTTGGCTGCATTTCCTTCTCTGCTTTGTTTTGTTTGTGTT-ACTAAGAATATTTGCATGAAAACAGGATATTTGTTTATTAAGAGTTCATCTTCTCCTGCTGTGTATTCCCTACTTTAAGTAGTCATATTCTTTAAGATTTATTAGCAAAA ..:x.......x:..x::x.xx...x..x...:---..x::..:...:.x.:-....:...:....x...x.....x..:......x.xx..........x:..xx:x.....x:x..:..x.:.x---.x:x..x....x..:...:x..x..x:xx..... 33M3I16M1D73M3I34M 101/156 64.7% 162/94230402 0.0% 7/156 4.5% 111449311 78765244 +3183 chr4 + 190214555 152000992 152000991 152001069 78 ATGTTTTTATATTTTTAAATTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865440 4865439 4865516 89364887 89364886 89364963 77 ACGTTCTTGTAAAGTAAAAATATATATATATATCTGGAAATAGAGA-ATCTTTTTTTTTGTTGTTTTGTTTTTTTTTT .:...:..:..xxx.x...x.............x.:x.x...x.x.-..x.........x..x....x.......... 46M1D31M 59/77 76.6% 77/94230402 0.0% 1/77 1.3% 147135552 43079003 +3271 chr4 + 190214555 152001008 152001007 152001065 58 AAATTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200270 4200269 4200327 90030076 90030075 90030133 58 AAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ......x............:.:.:.........x....::...:xxx.......x... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 147800738 42413817 +3373 chr4 + 190214555 152001011 152001010 152001067 57 TTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735347 92735346 92735403 1495000 1494999 1495056 57 TTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..::....x.....:...:..:.:........x......:.x.........:.x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 59265664 NA +3162 chr4 + 190214555 152001012 152001011 152001063 52 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x.....:...:..:.:..........x....:.x.........:.x... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 59265660 NA +3656 chr4 + 190214555 152001013 152001012 152001071 59 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735351 92735350 92735409 1494994 1494993 1495052 59 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA ....x.....:...:..:.:...............:.x.........:.x...:::... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 59265662 NA +3068 chr4 + 190214555 152001014 152001013 152001069 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 59265666 NA +3121 chr4 + 190214555 152001014 152001013 152001067 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 147800740 42413815 +3024 chr4 + 190214555 152042121 152042120 152042172 52 CTATCTGTCTGTGTATATATCTATGTATCTATGTATATATCTATCTGTCATC chr4 - 94230402 93452864 93452863 93452915 777488 777487 777539 52 CTGTCTGTCCGTGTATATATCTATCTATCTATATACATACACGCCGTTCATC ..:......:..............x.......:..:...:x:::.xx..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 58589257 NA +3021 chr4 + 190214555 152055971 152055970 152056014 44 CTTTTGTGGGTTTTTGTTTGTTTGTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 84067041 84067040 84067084 10163319 10163318 10163362 44 CTTCTGTGGGTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTTTCT ...:........................x.x.x.......x.:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 67988930 NA +3299 chr4 + 190214555 152074482 152074481 152074543 62 TGTGAATTTGGGCAAGTATCCCAGTTTCTCTGAGCCTCAGTTTCTGCATCTGAAGAATGGAG chr4 - 94230402 10384344 10384343 10384405 83845998 83845997 83846059 62 TATGACCTTGGGCAAGACGCTTAGTTTCTTTGAGCTTCAGTTTGTACAGCTGTAGAATTGAG .:...x:.........xxx.::.......:.....:.......x.:..x...x.....x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 141690138 48524417 +3093 chr4 + 190214555 152076468 152076467 152076520 53 TAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAGAAAGG chr4 - 94230402 50558508 50558507 50558560 43671843 43671842 43671895 53 TAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAG .....::.....x..........::.....:.:::...:.:x:........:. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 101517960 88696595 +3177 chr4 + 190214555 152085547 152085546 152085629 83 TTGTTTTGTTTTGTTTTGTTTTGTTTTTGTCTTCAAAGAAAGAATGTAACAGTTTAATGGATATAAAGGATAAGCGCACAAAA chr4 - 94230402 379398 379397 379480 93850923 93850922 93851005 83 TTTTTTTGTTTTGTTTTGTTTTTCTTTTTCTTCTGAGGAGAGACTGAAATCTTCAAGTGGAAATAAATCAGAAGCCCAAATAA ..x...................x:....x::.:::.:..:...x..x..:xx.:x.:....x.....xx.x....x..x.x.. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 151706149 38508406 +8093 chr4 + 190214555 152097409 152097408 152097551 143 AAAAAAAAAAAAGAAGAATGAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGGAAAAGAAGAA chr4 - 94230402 67066564 67066563 67066704 27163699 27163698 27163839 141 aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa--aagaaagaaagaaaagaaagaaagaaagaaagaaagGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAGTAGAGTAA ...:...:...::.....x..:........:...:...:...--...:...:...:..:...:..................:..:...:...:.:...:....:xx..:..x...........:.x.:......:x...:x.. 42M2D99M 109/141 77.3% 141/94230402 0.0% 2/141 1.4% 85030845 NA +4245 chr4 + 190214555 152097416 152097415 152097635 220 AAAAAGAAGAATGAGAGAAAGAAGGAA---------GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGA--AAGAAGGAAAGAAAGAAAAGAAAAGAA-------------AAGAAAAGAAAGAAAGGAAAAGAAGAAAGGAAAAGGAAGAAAGAAAAAAAGAAAGGGAGAGAG-----AGAGAGAAAGAGAAAGACAGAAACAAAGAGAGAAAGAAAGACAGAAAG chr4 - 94230402 86597813 86597812 86598058 7632345 7632344 7632590 246 AAGAAGTGAAGTAAGAGAAATGAGAAACTATCTCTGGGGTAGAGGAAAGGAGACTTATATGGTCAAGAGACAATGAAGAAAAGAAAAATGATTGAGCAAAAATGAATTAGTAGAGTAGAAGTTTTACTTCTGCAGAAAAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATG---AAAGGGATATAAAATGGCACAGGG ..:...x::.:.:.......x:..:..---------..:x:..:.:.....::xxx:x.x..xx:::.::x..x:......:...:..x..--:..x.::..x...xx.:x...:x....-------------.::.........:x........:x::........::.:x.:..x..xx..x...:...:x...-----..:..x:...:...:....x:---....:..x.x.:..x.:..x.::. 27M9I55M2I27M13I63M5I21M3D24M 135/217 62.2% 246/94230402 0.0% 32/217 14.7% 65499603 NA +3191 chr4 + 190214555 152097462 152097461 152097525 64 AGGAAGGAAGGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAAGAAA chr4 - 94230402 27809321 27809320 27809384 66421019 66421018 66421082 64 AGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTAGAAA ....:::.:..:....x:....x...:.......x...:.:.:......:.....:xxx..... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 124288141 65926414 +4220 chr4 + 190214555 152097518 152097517 152097679 162 AAAAGAAAAGAAAAGAAAGAAAGGAAAAGAAGAA--AGGAAAAGGAAGAAAGAAAAAAAGAAAGGGAGAGAGAGAGAGAAAGAGAAAGACAGAAACAAAGAGAGAAAGAAAGACAGAAAGAAAGAAAGTAAGAAA-----GAAAGAGAGAAAGAAAGATTGAGAGAGGA chr4 - 94230402 65901805 65901804 65901973 28328430 28328429 28328598 169 AAAAGAAGCCAAAATAGGTGAAGGAAATAAGTGAGTAGGAAATGTAAGGAAGAAAAAAATTAAAGTGGAGAGAAAAAGTAGAATAAATGAAAATCAAAACATAAAAGGAGAAACAGACAATATAAAATGGAAAAACATTGGAAGCAGAGAACAATAGACAGGGAGAAAA .......:xx....x.::x:.......x:.:x:.--......x.x...:..........xx..:.x:......:.:..x.::.x...x:x.:.xxx...x.x.:..:..:.:.....x.:x.x:...xx:.:...-----...:x......x:.x...:x.:....::. 34M2I99M5I29M 103/162 63.6% 169/94230402 0.0% 7/162 4.3% 86195713 NA +3901 chr4 + 190214555 152097535 152097534 152097704 170 AGAAAGGAAAAGAAGAAAGGAAAAGGAAGAAAGAAAAAAAGAAAGGGAGAGAGAGAGAGAAAGAGAAAGACAGAAACAAAGAGAGAAAGAAAGACAGAAAGAAAGAAAGTAAGAAAG--AAAGAGAGAAAGAAAGATTGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 59127709 59127708 59127880 35102523 35102522 35102694 172 AGAAAGGCAACCCATAGCAGAAAGGGAAGAAAAAAAAAAATCGAAGGAGCAGAACAGTCACCAAAGACTGCAGACACAGAGAGAGTGGAATGGAGTGAGAGGAAGAATACAGAAACACCAGAGTGTGAAAGGGAGATAAAGAGGGGAGATGAGTTAGTAGCAGAAGCTGGAA .......x..xxx.x.:x:....:........:.......xx:.:....x:::.x..xx.xx:.::.xx:....x...:......x:::.x:..xx..:..:.....x::.::..x:--.:..x.x.....::....x:....:...::x:..xx..x.:x::.:.xx.... 117M2I53M 100/170 58.8% 172/94230402 0.0% 2/170 1.2% 92969826 NA +4286 chr4 + 190214555 152098250 152098249 152098330 81 CTGCAGCCTCTACCTCCTGGGCTTAAGTGATCCTCACACCTCAGCCTCCCAAGTACCTGGGACTACAGGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:.....:xx.x..:.....:.:.....x.:.x..x:x........::......x....:......x.........::.. 81M 60/81 74.1% 81/94230402 0.0% 0/81 0.0% 133901124 56313431 +3008 chr4 + 190214555 152111876 152111875 152111929 54 ATATAAATATATATATATATATTTTTATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ................:...::x:x:.:...:.....xx.x............. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 143429946 46784609 +3252 chr4 + 190214555 152138393 152138392 152138472 80 TTCTTCTCCTTCTTCTCCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTTTTAACAGCTTCATTTATGTAA---AATTGAGT chr4 - 94230402 47089616 47089615 47089698 47140705 47140704 47140787 83 TTCTTCACCCCATTCCTCATCTTCTTCCTCCCCACCTTCTTCTTCGTCGCTTTCACTGTTGCTTTCATCTAAGCCAATTGCGT ......x..::x...::.x........:..::.x...........x..x:...x..x.:.x.x..:..x...---.....x.. 72M3I8M 58/80 72.5% 83/94230402 0.0% 3/80 3.8% 105048777 85165778 +3039 chr4 + 190214555 152151814 152151813 152151852 39 TCCATCAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAT chr4 - 94230402 48383078 48383077 48383116 45847287 45847286 45847325 39 TCCATGGGAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAT .....x::................:.............. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 103768736 86445819 +3194 chr4 + 190214555 152168579 152168578 152168624 46 CTCTGACTCAAAAAACAAACAAACAAAAAAAAAAACCTCATATCGT chr4 - 94230402 71871112 71871111 71871157 22359246 22359245 22359291 46 CTCTGTCTCAAAAAACAAACAAACAAAAAAAGTAAAATCATATTGT .....x.........................:x..xx......:.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 80297467 NA +3099 chr4 + 190214555 152176732 152176731 152176806 75 TCTTTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTTTCTTTTT chr4 - 94230402 83960537 83960536 83960611 10269792 10269791 10269866 75 TCTTTCCTTTGTTCTTCATGCTTTTCTTGGCCTTTTGTTTCTTTATTCTCTTCTTCTTTCACTGTTTTTCTGTTT .....:....x..:...x.x........xx:::...x.......x..:.::.:.:...::x::x.......x... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 68216195 NA +3299 chr4 + 190214555 152176732 152176731 152176807 76 TCTTTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCT----TTCCTTTTTCTTTTTT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..::..x.x....x:.:.:...xx..:.x...:..........:...........:x...----.....x....:.x.:. 60M4I16M 56/76 73.7% 80/94230402 0.0% 4/76 5.3% 133187915 57026640 +3463 chr4 + 190214555 152176734 152176733 152176805 72 TTTTCTTTTTTTTTCTTTCTTTTCTTTTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCTTTCCTTTTTCTTTT chr4 - 94230402 45185615 45185614 45185686 49044717 49044716 49044788 72 TTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTT ......x:..:x...............:x.:....x:::..::.:.......xx:....:.....:..x:.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 106991119 83223436 +3010 chr4 + 190214555 152188735 152188734 152188772 38 CTCTCTCTCTTTCACACACACACACACACACACACCCC chr4 - 94230402 81178149 81178148 81178186 13052217 13052216 13052254 38 CTCTCTCCCCTTCACACACACACACACATACACGCCTC .......:.:..................:....:..:. 38M 33/38 86.8% 38/94230402 0.0% 0/38 0.0% 71010586 NA +3030 chr4 + 190214555 152190233 152190232 152190278 46 TTATGTGTGTGTGTGTGTGTGTGTATATATATATACACACACACAC chr4 - 94230402 44746771 44746770 44746816 49483587 49483586 49483632 46 TTACGCGTGCGTGTGTGTGTGCATGTATTTATAAACACATACACAC ...:.:...:...........::.:...x....x.....:...... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 107443462 82771093 +3151 chr4 + 190214555 152190239 152190238 152190283 45 GTGTGTGTGTGTGTGTGTATATATATATACACACACACACACGTT chr4 - 94230402 58118595 58118594 58118639 36111764 36111763 36111808 45 GTGTACGTGTGTATGTGTGTGTATATATACGCACAGGCACACGTT ....::......:.....:.:.........:....x:........ 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 94071644 NA +3521 chr4 + 190214555 152205068 152205067 152205193 126 AAGAACTTGAA-AGGTATCATTTCACTTAATCCCTCCAACAATGCTTTTG---GGTAGG-ACCTATTATTGCTTCCATTTTATAGATGAGGACACTGAAGCACAGAGAGGTGAAGAAAATTTTCCACAGTC chr4 - 94230402 10729136 10729135 10729262 83501141 83501140 83501267 127 AAGATCCTGAATAAACAGGAATTGATTTAGCCTC----ACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....x.:....-.:::.xx.x..x.:...::.:.----.....:.:::..---......-.x:..:...::x:.........:..:..:.:.x.....:.....x.x....x...x..x..x:...x.... 11M1I22M4D12M3I6M1I71M 84/122 68.9% 127/94230402 0.0% 9/122 7.4% 141475932 48738623 +3044 chr4 + 190214555 152211488 152211487 152211550 63 CAAGAGCAAAAC-TCCGTCAG--------AAAGAAAGAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGA chr4 - 94230402 25781735 25781734 25781806 68448597 68448596 68448668 72 CAAAAGTAGGACGTCCTTCAGGCTTCTGGAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAA ...:..:.::..-...x....--------.......:.............:...:...x..:.:.:....:. 12M1I8M8I43M 50/63 79.4% 72/94230402 0.0% 9/63 14.3% 126429753 63784802 +3400 chr4 + 190214555 152211576 152211575 152211685 110 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGAGAGGA chr4 - 94230402 61334701 61334700 61334810 32895593 32895592 32895702 110 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGATTGGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx..x.::...x.x......x..x..:.::..:x.:.:.:::.:.....:x...xx... 110M 68/110 61.8% 110/94230402 0.0% 0/110 0.0% 90876875 NA +3390 chr4 + 190214555 152211591 152211590 152211692 102 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAGGAAGGAAGGAAGGAAAGGAGGGAGAGAGGAAGGAAGG chr4 - 94230402 10903375 10903374 10903475 83326928 83326927 83327028 101 AGAAAGGAGAAAGAAAAGACAGAAAAATGTAAGAACAGAGTT-GAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAATGTGGG ......:.::..::.....x.....:.x:x..::.x....xx-...x...............::..xx:...:..x::.:.x.:x.:.x.:.....x.x:.. 42M1D59M 66/101 65.3% 101/94230402 0.0% 1/101 1.0% 141308216 48906339 +3032 chr4 + 190214555 152243300 152243299 152243358 59 TAGTGCTTGCCATTTCAGAGCTGCTGGAGGCTAGTTAAGAAAACAGAACCAGAGTTTTT chr4 - 94230402 53402925 53402924 53402983 40827420 40827419 40827478 59 TGGTCCTTGCCTTTTTCGAGCTGCTAGGCATCGATTAATGAAACAGAACCAGAGTTATT .:..x......x...:x........:.:x:::::....x:................x.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 98840375 91374180 +3186 chr4 + 190214555 152249604 152249603 152249677 74 CTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::........::x...x.xx.x........::::.........:......x.x.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 134052478 56162077 +3138 chr4 + 190214555 152253493 152253492 152253622 130 TATAATGTCTTTCTTTTTTTTTTTCTTTTTTTCTTTCTTTTTTAATTTTATTATTATTATACTTTAAGTTTTAG------GGTACATGTGCACAACGTGCAGGT-----TTGTTACATATGTATACATGTGCCATGTTGGT chr4 - 94230402 17512649 17512648 17512789 76717614 76717613 76717754 141 TGTAATGTTCTTTTTTTTTTTTCTGTTTCAATTTTTCTTTTTTAATAAAGTCATTATTGCTTCTAAAATTCCAGTTATTTGGTAGATATATGCAGAATGACAGTATCACTTACCAAAGGTGAGCCCATATGCTGTTGTGGT .:......::..:.........:.x...:xx.:.............xxx:.:......::x::.x..:..::..------....x..:.:::..:x:..xx:..-----..:::.x.x:..x::x...:...::.xx.... 74M6I24M5I32M 80/130 61.5% 141/94230402 0.0% 11/130 8.5% 134740844 55473711 +3066 chr4 + 190214555 152297522 152297521 152297564 43 CTTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTCTTCTTTCT chr4 - 94230402 43081982 43081981 43082024 51148379 51148378 51148421 43 CTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:.x.....................x.xx............ 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 109215540 80999015 +3380 chr4 + 190214555 152314122 152314121 152314204 83 CTGCAACCTCCACCTCCCGAGGTCAAGCGATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx.x..:.:.:.x.....:.x...x.xx..........::.:.........:.:....x.::.--.....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 134116996 56097559 +3376 chr4 + 190214555 152326228 152326227 152326431 204 AACTCTGCAGAGGGAGAAACAGAAAAACAAAACAAAACAAAAAAACCCACGTTTAGAAT---TTTTAATAATATGAGAAAACATG---GTAGATTTAGTCAAGGTTTTTTAGCTTTTTTTT----TTTTTTTTTTACACAGCAACAACCATTTTCAAAAGAAAT-CCTATGTAAAACCTTGGTATATAAACATAATAAGGGAATGGGAAGTTGGG chr4 - 94230402 25002875 25002874 25003077 69227326 69227325 69227528 203 AGCTTGACAATAGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCATTCATTCATTGAAGAAAAACTATACATAAACACACACAAAATAGTCTGGATATTCTTTAGGCTAATCATTTCACAGAGCAAAGG----TTACAAAACAAACACCTA--------CTTCTTATATAACAACACTGTTTGAAGGGAAGTTTGGG .:..:x:..:x:.:.:.....:.x..........................::x..:...---x..:.x.x..xx:......xx.:---:..:.:x:.xx...::.xx.:.:.x.x..:...----.xx.:x...:...x.....x::----..x.....x...:-....--------...xx.......xx.:.x.:xxx...x..:.:x..... 59M3I23M3I33M4I22M4D13M1I4M8D38M 125/192 65.1% 203/94230402 0.0% 23/192 12.0% 127323353 62891202 +3796 chr4 + 190214555 152357397 152357396 152357474 78 TGCAACCTCCACTTCCTGGGTTCAAGAGGTTCTCATGACTCAGCCTCCCAAGTAGCTGGGATTACAGTCGTGTGCCAC chr4 - 94230402 18197127 18197126 18197202 76033201 76033200 76033276 76 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .:..:..:xx.x:.:...........x.x...x..x.:........::...........:.:....--....::.... 66M2D10M 57/76 75.0% 76/94230402 0.0% 2/76 2.6% 134160270 56054285 +3101 chr4 + 190214555 152362823 152362822 152362874 52 TCTCTCAAAAAAAAAAAAAAAAAAAAACAACAAGAACTTGGAATAGTTTTCA chr4 - 94230402 86759786 86759785 86759837 7470566 7470565 7470617 52 TCCCTGGAATGAAAAAAAAAAAAAAAACAACAAAAACCTGGGCAAATTTTCA ..:..x:..x:......................:...:...:xx.:...... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 65603037 NA +3298 chr4 + 190214555 152374064 152374063 152374177 114 TATTTTCCAAGTACCAATGGAAGATATATGCAAGTAAGAGAAGC-----------------------TTAGAAAGCCACATTTTAGTTTCCTCACTCAAAAACAAACAAACAAAAACAAAACAAACCAAAAAAACCC chr4 - 94230402 71516598 71516597 71516733 22713670 22713669 22713805 136 TATTTTTAAACTACTAAAATAAGTGATTTAAAAATAAAAAAAATGCAGATGATCTTTAAGGTAGTTTTTGAAAAATCATTTACTACTTTCTGTCCT-GAAGGCAAAAAAACAAAAACAAAACAAAACAAAAAAACCC ......:x..x...:..x:x...xx..x.:x..:...:.:..::-----------------------..::...::..:x.x:..x....:x:x..-:..::....x..................x........... 44M23I29M1D40M 78/113 69.0% 136/94230402 0.0% 24/113 21.2% 80857466 NA +3265 chr4 + 190214555 152374095 152374094 152374174 80 AAGTAAGAGAAGCTTAGAAAGCCACATTTTAGTTTCCTCACTCAAAAACAAACAAACAAAAACAAAACAA-ACCAAAAAAA chr4 - 94230402 33205626 33205625 33205706 61024697 61024696 61024777 81 AAGCAAAATGAATTTCAAAAGCTGAGTGCCAAGTTTACCTCTTAAAAACAAACAAACAAAAAAAAACCAATACCAAAAAAA ...:..:.x:.::..x:.....::x:.x::.:x..:x:.x..:...................x...x...-.......... 70M1I10M 56/80 70.0% 81/94230402 0.0% 1/80 1.2% 119168469 71046086 +3260 chr4 + 190214555 152374127 152374126 152374190 64 TTTCCTCACTCAAAAACAAACAAACAAAAACAAAACAAACCAAAAAAACCCCACCACA--AAACAG chr4 - 94230402 8287220 8287219 8287284 85943119 85943118 85943183 65 TTTTCTTGCTCAAAA-CAAACAAACAAAAACAAACAGCACCAAAAAAAACCCACAAAAATAAACAG ...:..::.......-..................xx:x..........x.....x.x.--...... 15M1D42M2I6M 53/63 84.1% 65/94230402 0.0% 3/63 4.8% 144086907 46127648 +3326 chr4 + 190214555 152426425 152426424 152426498 74 CTGTAGCCTCCGCCTCCCGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..::....:xx:x..:.:.........:.x...x:xx.x........::x:.........:......x.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 134229299 55985256 +3016 chr4 + 190214555 152471442 152471441 152471490 49 AAAGAGAGAAGGAAGGAGGGAAGGAAGGAGGGAAGCAGGGAGGGAAAGG chr4 - 94230402 52584845 52584844 52584893 41645510 41645509 41645558 49 AGAGAGAGAAGAAGGCGGGGGGGGGTGGGGGGAAGTAGAGAGGGAAAGG .:.........:.:.x:...::..:x..:......:..:.......... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 99886597 90327958 +4028 chr4 + 190214555 152474741 152474740 152474814 74 CTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::..........x...x.xx.x........:............:......x.:.... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 134277615 55936940 +3254 chr4 + 190214555 152497321 152497320 152497382 62 CAAAAAAAAAAAAAAAAAAAAACCACACACACACACACACACACACACACACACACTATGAG chr4 - 94230402 52796036 52796035 52796097 41434306 41434305 41434367 62 CAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGACATTCTGAGAG ...x..x.......:.:.:...x......:...........x.:..x..x...:x..:x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 99701285 90513270 +3010 chr4 + 190214555 152506925 152506924 152506987 63 AATGCACAATATGAATGAATTCTGTGAAGCCAAAACAACATGGTCTATCTAATACCTTGCTTA chr4 - 94230402 16991052 16991051 16991114 77239289 77239288 77239351 63 AATTCACAGAGAGAATGAATACTGTGAAGGCAAAGCCACATGATTTATAAAATACATTAGTTA ...x....:x:x........x........x....:.x.....:.:...xx.....x..:x... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 135515873 54698682 +3346 chr4 + 190214555 152512919 152512918 152513019 101 TGGCACCATCTCGGCTCACCGCAACCTCCACCTCCCAGGTTCCAGCGATTCTCCTGCCTCGGCCTCCCAAATAGCTGGGACTACAGGCGCACACCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:...x.:------.::..:..:xx.x..:.::.....x..:.x...x.xx.x...:....::...:.......:......--..::......::.. 12M6D67M2D14M 64/93 68.8% 93/94230402 0.0% 8/93 8.6% 134315805 55898750 +3112 chr4 + 190214555 152527855 152527854 152527912 58 AAAAATTATATACACACACACACACACACACACACACACACACACACATATATATACA chr4 - 94230402 87372735 87372734 87372792 6857611 6857610 6857668 58 AAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA .........x.x..x...........x.........:x:.:..::.::..::....:. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 65155120 NA +3029 chr4 + 190214555 152527861 152527860 152527932 72 TATATACACACACACACACACACACACACACACACACACACATATATATACACACACACATACATTCTTCCA chr4 - 94230402 66904850 66904849 66904921 27325482 27325481 27325553 72 TATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCA ...:...::.........:...........:.:x:.x::x..x:.:......xx..:..::.:x.:..::.. 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 85623011 NA +3073 chr4 + 190214555 152530057 152530056 152530108 52 AAAAAAAAAAAAATACACACACACACACACACACACACACACACACGTGTAT chr4 - 94230402 71167190 71167189 71167241 23063162 23063161 23063213 52 AAAAAAAAAAAAATACACACACACACATATATATATATATAATTACAAGTAT ...........................:.:.:.:.:.:.:.xx:..:x.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 81362867 NA +3166 chr4 + 190214555 152530059 152530058 152530124 66 AAAAAAAAAAATACACACACACACACACACACACACACACACACGTGTATATATATACGTGTACAT chr4 - 94230402 87372728 87372727 87372793 6857610 6857609 6857675 66 AAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..:.:......xx:.:x:x..x...........x.........:x.:..::...:.....:..:.. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 65157331 NA +3382 chr4 + 190214555 152530065 152530064 152530160 96 AAAAATACACACACACACACACACACACACACACACACGTGTATATATATACGTGTACATATATATATATACGTATATATATGTATATACATCAAA chr4 - 94230402 4417347 4417346 4417442 89812961 89812960 89813056 96 AGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAA .:.x...:.:.............x:x...:..:..::x.x..x.::.:..:::.xx.x::..x..x......::....x...x.....:.xx.... 96M 62/96 64.6% 96/94230402 0.0% 0/96 0.0% 148112718 42101837 +3146 chr4 + 190214555 152531518 152531517 152531591 74 TGTCTACATTTTTTTAAATGCCAAGTTGCTTTTTTTTAATAAAAAGTTTAAAAGGAAAAAAAAAAAAAAAGCAT chr4 - 94230402 39606782 39606781 39606851 54623552 54623551 54623621 70 TGGCTTCATTTCT----ATACCAAAGTATTCCTTTTTTAAAAAAAGATGGAAAGGAAAAAAAAAAAAAAGGGAT ..x..x.....:.----..:....:x.::.::.....x.x......x.x:...................:.x.. 13M4D57M 53/70 75.7% 70/94230402 0.0% 4/70 5.7% 112924736 77289819 +3020 chr4 + 190214555 152534106 152534105 152534152 47 GTTTTATAAACTTCAGCTTTAAAATAATGGAAGGAAAAAATCATTCC chr4 - 94230402 93820524 93820523 93820570 409833 409832 409879 47 GCTTTACAAACTTCTGCTTTAAAGTAACTGCAGGAAAAAACCGTTCC .:....:.......x........:...:x.x.........:.:.... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 58713582 NA +7258 chr4 + 190214555 152551197 152551196 152551405 209 ACACACACACACAAATTTTCATTTTCCATGTTTTTTTTCACAAATAGGACTTTTTATTTGCCATTTTAAATGTCTGAGTGTTAAACACACTCTTGGACTGGTGGTTCATATCCATCAGCTCATTCAACTTTAGAACCTGTCTCTTCTCCAGTAGCTTTTCCAGAACTGCTACCTTCGCCATGAAGCTCCATGAGATTTCCCAATTCAAA chr4 - 94230402 59858249 59858248 59858439 34371964 34371963 34372154 191 ATACATGCAACCAAA----CACTTCTCGTGTGT---------AATAAAACTTTTATTTT----TGGTCAATATTT-AGTTTCAGACAGACTCTTGCACAGGCGGCTCGTATCCATCAGCTCGCTCTACTTTCGCACCTGCCTCATCCCCAGAAGGTTTTCCAGCACCGCCACCTTCACCGTGCAGTTCCATCAGCTTGCCCACTAAAAA .:...::..xx....----..:..::.:...x.---------....::......xx...----.xx.x...:.:.-...x.:.:...x.......x..x..:..:..:.............::..x.....x.x.....:...x..:....x..x........x..:..:......:..:..x..:.....x..x..x....x.xx... 15M4D14M9D17M4D12M1D133M 140/191 73.3% 191/94230402 0.0% 18/191 9.4% 92692948 NA +6688 chr4 + 190214555 152551399 152551398 152551508 110 ATTCAAACTTGGTCTTCTTCAGCATTTTTACTTTTCTAATGAAGACATCATTGAGAGAATAAATAGATTGGTAAGCCTTATCTATGTCTTTTCCAATGCTGTCTGGAATC chr4 - 94230402 59858992 59858991 59859101 34371302 34371301 34371411 110 ATTCAAACTTGGGCTTTTTCAGCATCTTAACCTTGCGGACATAGACATCGTGAAGGGGGTAAATGGACTGACAAGCCTTCTCTATGTCTTTGCCAATGCTGTCTGGGATC ............x...:........:..x..:..x.x:.::x.......:.x:..:.::.....:..:..::.......x...........x..............:... 110M 86/110 78.2% 110/94230402 0.0% 0/110 0.0% 92692407 NA +17962 chr4 + 190214555 152551508 152551507 152551898 391 CAATTTATTGACCACTTCTTTCAAGTCATTTCTCTGTACCTCTCGGGTCATGATTTCCATCATCTTCTTCCAGATTTGGCAGACCTGTTTGTGCTGAGCATAAGAGGTCTTCCATATCTGATTGTTATGTTTTTTAGTAAAAGCAGTACAGAATAGACAAAGCAAGTAACCGTCAGTAGTCTTGACATCAACATGAGCTTCAATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTGCCATTTTTTGACCATGGAACACATTCTGCCACAGGTAAGATCCATGCTATGGAAGTTAGGCAG------TTTTTCCTGGACACCTTAAGTAATCAGCTTGAATTTTCTAAATGCAACTTCATAATTTTGCAGATCAGCAAGACTCATTTCAAACACACGACCCTTGAGGCCATCTGATGCAATTT chr4 - 94230402 59859658 59859657 59860214 34370189 34370188 34370745 557 CAGCTTATTGACAACTTCTTTCAGGTCATTGGTCTGGACCTCTCGGGTCATGATTTCCATCATCTTCTTGCGAATCTGCCGAACCTGCTGATGCTGGGCATACGAGGTCTTGCGGATTTGGTTATTACGCTTCTTTGTGAAACCCACACAGAAGAGGCGCAGTAGGTAACCATCCGTAGTTTTGACATCCACGTGGGCTTCAATCATCGTCTGGAAAAGAAACAGTTATGCCCATGACAGGCCTCCCAGACGTGCACCTGACATTCATTAATATCCGCCAATACCATCAGAAACAGCTTTAGGGCACACCAGTAGCCACTTCCTTTCCTAAAGAGGAAAGCAGTAACGCAGACCTTGTTCTTTACACACCTGCCACTTCTTCACCATGGAACACATTTTGTCGCGGGTGAGGTCCATTCCATGGAAGTTGGTCAGACAATTTTTCCCCTGAACGTCCTCAGTTATCAGCTTAAATTTACGGAAGGCAACCTCATCGTTCTGCAGATCAGCCAGACTCACTTCAAATACACGACCCTTCAAGCCATCAGAGGCAATTT ..::........x..........:......xx....x................................x.::..:..x.::.....:.x:.....:.....x........x.:x..:..:..:...:.:..:..x..:...x.x::......x..:.:x..:.:......:..x.....:........x..:..:...........----------------------------------------------------------------------------------------------------------------------------------------------------------------::......:..:..x...............:..:.:.:...:..:.....x.:.........:.x...------...::....:..::.:.x...x........:.....x.x:..x.....:....x:..:...........x.......:......:...........x.:......x..x....... 207M160I68M6I116M 306/391 78.3% 557/94230402 0.0% 166/391 42.5% 92691850 NA +5956 chr4 + 190214555 152551899 152551898 152552001 103 TGGTTCCTTCAGTGCTGGTGACTAGTGTCTTTCCAATATTTCTTATGTTGAACATAGCAGGTGCTTTCACATCATACCAGTCTTTCTTAGAAACTAGATCAAC chr4 - 94230402 59861075 59861074 59861177 34369226 34369225 34369328 103 TGGTTCCTTGGGTCCTGGTAACAAGAGTCTTCCCAATGTTTCTGATATTAAACATCGCTGGCGCTTTGACATCATACCAGTCCTTTTTGGAGAAAGGGTCAAC .........x:..x.....:..x..x.....:.....:.....x..:..:.....x..x..:.....x..............:..:..:..:.xx:.:..... 103M 80/103 77.7% 103/94230402 0.0% 0/103 0.0% 92690824 NA +3824 chr4 + 190214555 152552312 152552311 152552366 55 CACTTTCTTCTTGGTTCCCCTTTTGCTGCCTTTCGTGAGGCACTTGTTCTTGCTG chr4 - 94230402 59861544 59861543 59861598 34368805 34368804 34368859 55 CACTTTCTTCTTGGCGCCTTTCTTGCCGCCCTTGGTGAGGCGCTTGTTCTTGCCG ..............:x..::.:....:...:..x.......:...........:. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 92690768 NA +3822 chr4 + 190214555 152553987 152553986 152554175 189 AAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAA-----GAAGGAAAGAAAGAAGAAAAGAAAGAGAAAGAAAGAAAGCTGGTGGGCTGTGAACTCAGTCTCCTT chr4 - 94230402 30533164 30533163 30533357 63697046 63697045 63697239 194 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCACATTTAAATATAATAAGAAAGCATGGAAATTACTGAAATTCATACTCAGTAACCCT ...x.:....:..........::.:.::...:.:.:.xx:x....:.:x:..:.xxx....x.:...x...:.x...:::.x::::.:...:.:.....:x:xx:.....:.:.:...x:..:-----.:..x.xxx.x.xxx:..x.x..x:......x.x.:..::.:x..::x.x::x.......xx..:. 123M5I66M 107/189 56.6% 194/94230402 0.0% 5/189 2.6% 122020823 68193732 +3138 chr4 + 190214555 152553990 152553989 152554146 157 AAGAAAGAAAGAAAGAAAGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGAAAAGAAAGAGAAAGAAAGAA chr4 - 94230402 86597683 86597682 86597839 7632564 7632563 7632720 157 AGGAAAGAAGTCAATCAGGACATTAAAAGAAAGAGCAGAGCATGAAAAGAAAGAGCAG--AGGGGGGTCAGTAAGACAGAATGTATGTGACATAGAAAGAATTAGATACAGAAGGAAGGGCACACATATCACAAGAAGTGAAGTAAGAGAAATGAGAAA .:.......:xx..xx.:..x.--:.........:x::.:x.x::..........x.:--.:.:.:.:x..x:...x...:x.x.x.x:.x.x.......:xx...x.x.:..:...:.:x.x.x:x.xx:x......x:...x........x:.::.. 22M2I34M2D99M 94/155 60.6% 157/94230402 0.0% 4/155 2.6% 65956307 NA +3168 chr4 + 190214555 152553992 152553991 152554090 99 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAA chr4 - 94230402 61334701 61334700 61334799 32895604 32895603 32895702 99 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x...:xx..x.::.:.xxx.....:x..x..::...:.x..:.........:. 99M 62/99 62.6% 99/94230402 0.0% 0/99 0.0% 91219291 NA +3021 chr4 + 190214555 152554012 152554011 152554107 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:..:x::::...x:x:..x...:xx..x:::...x.x...:.:x:.x..:..:...x.::........ 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% 91219311 NA +3572 chr4 + 190214555 152554016 152554015 152554116 101 GAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAA chr4 - 94230402 61334701 61334700 61334801 32895602 32895601 32895702 101 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ......:.....x......x.:x........:x:::...xx:xx..x...:xx..x.::...x.x...:.:x..x..:..:...x..:........:.::. 101M 66/101 65.3% 101/94230402 0.0% 0/101 0.0% 91219315 NA +3614 chr4 + 190214555 152554020 152554019 152554115 96 GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAGCGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x.:......:x::x....x:xx..x...:xx..x.::...x.x......x..x..:....:.x..:.....:.. 96M 65/96 67.7% 96/94230402 0.0% 0/96 0.0% 91219319 NA +3026 chr4 + 190214555 152554078 152554077 152554121 44 GAAAGAAAGAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAA chr4 - 94230402 25781763 25781762 25781806 68448597 68448596 68448640 44 GAAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAA ........:...................:.x..::.:::..... 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 126772315 63442240 +3100 chr4 + 190214555 152555163 152555162 152555249 87 TGCTTTCTTTTACTTCTACCTGTCATTCTATTATATTTCTATTTCTTTTCTTTGTCTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 70187555 70187554 70187641 24042762 24042761 24042848 87 TGCTTTCCTTTGTTTGTTTCTGTATGTTTGTATGATTTCTGTTTGTCTCTTTTTCCTTGTTTTCTACCTTTTTTCTTTTACTACTTT .......:...::..x.x:....xxx.:.:.xxx......:...x.:.::...x:...x:.....x:.......:....x:.x:... 87M 57/87 65.5% 87/94230402 0.0% 0/87 0.0% 82367608 NA +3238 chr4 + 190214555 152555197 152555196 152555260 64 ATTTCTATTTCTTTTCTTTGTCTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTTCTGAGACAGGG chr4 - 94230402 49339958 49339957 49340021 44890382 44890381 44890445 64 ATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAG ......x...xx.x.x...x..:....:.......:.............::..x..::.x..:. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 103215239 86999316 +3358 chr4 + 190214555 152576554 152576553 152576625 72 TAATTTTTGTGTATACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681934 56681933 56682004 37548399 37548398 37548469 71 TAATTTTT-CATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ........-::....:x:.:....x:.:...:....:..x:.......x...x...x....x.......... 8M1D63M 54/71 76.1% 71/94230402 0.0% 1/71 1.4% 95894620 NA +3505 chr4 + 190214555 152576563 152576562 152576618 56 TGTATACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:...:x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 59841215 NA +3349 chr4 + 190214555 152576565 152576564 152576626 62 TATACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 92735348 92735347 92735409 1494994 1494993 1495055 62 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA .::.:..x.....:...:..:.:........x......:.x.........:.x...:::... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 59841217 NA +3110 chr4 + 190214555 152576567 152576566 152576620 54 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 148376293 41838262 +3199 chr4 + 190214555 152576567 152576566 152576622 56 TACATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .:.....x.....:...:..:.:......x.x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 59841219 NA +4465 chr4 + 190214555 152590962 152590961 152591061 100 TTCATCCTCATGACAATCCTTTGAGATCAGTACTGTTATTATC----CCACGTTACAGATAAGGAAACTGAGGCACAGAGAAGTTAAGAAACTTGCCCAGGGTC chr4 - 94230402 10729161 10729160 10729262 83501141 83501140 83501242 102 TTTAGCCTCACAATACCCCTGTGAGGTAGGTA--ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.x.....::.:.x:...x....:.x:...--:...:....----...:x......:.::.:.............x.x.:......x..:........:... 32M2D9M4I57M 73/98 74.5% 102/94230402 0.0% 6/98 6.1% 141861801 48352754 +3038 chr4 + 190214555 152593761 152593760 152593825 65 TCCACGTCAAAAAAAAAAAAAAAAAAAAAAGAAGAGAAAATTGACATAGACTTGCCTCCCTTTCT chr4 - 94230402 56794887 56794886 56794951 37435452 37435451 37435516 65 TTCACATTAAAAAAAAAAAAAAAGAGAGAGTGAGAGAAAGTGAACACAAAGCTTCCTCTAATTCT .:...:.:...............:.:.:.:x:.......:.x:...:.:.x:.x....:xx.... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 95798874 NA +3570 chr4 + 190214555 152617421 152617420 152617583 163 ACATTTTCTCACTGGAACCAAGAGTCTTGT-----TTAAACAAACACACCACTATTACACATACAGAGAGACAATTAGAAGTGTATTTATTTAGTATATATATAACACTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATT chr4 - 94230402 40224574 40224573 40224716 54005687 54005686 54005829 143 ACATTTTCCTCCT------AACAGCTTTGTCAGAATTAAACACACAAACTA-----GCACATGTATAAAGCTAAT-------------ACTTA-TACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTT ........::x..------..x..::....-----.......x...x..:.-----:.....::.x.:..x:...-------------.:...-..:....:....x:.x..:.:.xxx.x:::x:.x.x.............:..........x...:....:.:.. 13M6D11M5I16M5D19M13D5M1D74M 98/138 71.0% 143/94230402 0.0% 30/138 21.7% 112392847 77821708 +3776 chr4 + 190214555 152617481 152617480 152617607 127 GAGAGACAATTAGAAGTGTATTTATTTAGTATATATATAACACTATGCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTAATGCAAAG chr4 - 94230402 57691352 57691351 57691477 36538926 36538925 36539051 126 GAAAAGCAAATAGGATTTTATTCATC-GCTATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAAG ..:.::...x...:.x.x....:..:-:x....:x.::xx:xx..x.:.:..:::..:x.......:..:x.........::..x....:x...x.....x..xx...x:x..........:::... 26M1D100M 80/126 63.5% 126/94230402 0.0% 1/126 0.8% 94926129 NA +3086 chr4 + 190214555 152617529 152617528 152617598 70 GTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 57691397 57691396 57691466 36538937 36538936 36539006 70 GTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTT ..:::.:::..:x.......:..:x..........:..x....:x...x........xx...x:x..... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 94926132 NA +3121 chr4 + 190214555 152617535 152617534 152617615 81 GTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTAATGCAAAGAAAACTGT chr4 - 94230402 50558510 50558509 50558590 43671813 43671812 43671893 81 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAGATTTACAGAAAAATAT ...::.....x..........::........:..:....x.:.x.x.xxxx........xx.xx:..x:.x......x.:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 102059025 88155530 +3100 chr4 + 190214555 152617540 152617539 152617611 72 TGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTAATGCAAAGAAAA chr4 - 94230402 89821282 89821281 89821353 4409050 4409049 4409121 72 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGACAACAAAAA .........x.x.........:.............:..:.xx:.:xx.:.:...xx:..x.x:...x:.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 62796258 NA +3067 chr4 + 190214555 152617542 152617541 152617595 54 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTT chr4 - 94230402 89821282 89821281 89821335 4409068 4409067 4409121 54 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTT .........x.x.......................:..:.x::.:xx.:.:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 62796260 NA +3172 chr4 + 190214555 152617546 152617545 152617597 52 TGTGTGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 19559296 19559295 19559347 74671056 74671055 74671107 52 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt ...............:..............:.xx..x.....x.x.x..:.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 133058250 57156305 +3175 chr4 + 190214555 152617550 152617549 152617626 77 TGTGTGTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTAATGCAAAGAAAACTGTTGGGCCTCATG chr4 - 94230402 61428356 61428355 61428432 32801971 32801970 32802047 77 TGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTATCAATGGATAGAAAAAGATTTCTCCACATG ...:......:.......:.......:.:.:..xx......xx.x.x.:....x.x......xx:..xxx..x.... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 91189194 NA +3178 chr4 + 190214555 152628566 152628565 152628620 55 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAACACACACACACACACAAAA chr4 - 94230402 52796023 52796022 52796077 41434326 41434325 41434380 55 AAGGAAAAGGAAACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAA ..::....::...x..x..x.......x.:.:..........:.........x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 99832543 90382012 +3416 chr4 + 190214555 152628576 152628575 152628652 77 AAAAAAAAAAAAAAAAACAAAAAAAACACACACACACACACAAAACAGTAATATATTTCTTTCTTTTTTTTTTTTTT chr4 - 94230402 60859939 60859938 60860014 33370389 33370388 33370464 76 AAAAAGAAAAGAAAAAACAAAAATAACAAAGATGCACACATGAGAAAAGAA-ACAGGCCTATCTTTTTTTTTTTCCT .....:....:............x....x.x.::......::.:.x.:x..-.:.xx:..x.............::. 51M1D25M 56/76 73.7% 76/94230402 0.0% 1/76 1.3% 91768637 NA +3117 chr4 + 190214555 152631764 152631763 152631821 58 GAGTTTTTAATGTAGTTAAATCTATCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 10030740 10030739 10030796 84199607 84199606 84199663 57 GAGTGTTTA-TGTGATTATATGTATTCCCCACTTTTCTTTTTTTTCTTTTTTCTTTTT ....x....-...::...x..x...:....x:....:........:......:..... 9M1D48M 46/57 80.7% 57/94230402 0.0% 1/57 1.8% 142601024 47613531 +3981 chr4 + 190214555 152676378 152676377 152676555 178 TGGAAACCCAGAGGT--AGTATGGAGTATGGTTAGAGAATGGACTCCTGAGGCAGAATCTTACTTAGATTCACTAATTAGCTGTGTGACCTTGGGCAAGTCACTTAGCCTCTCTGTGCCTCAGTTTTCTCAAATGTAAAAACAGGGATAAT--AGTGCCCACCTTATAAGGTTGTTCTGAGA chr4 - 94230402 11947145 11947144 11947315 82283088 82283087 82283258 171 TGAAAACCAAGGGGTGTATTATATAGCA--GTTAGAG--------CAGGAGACTGGGGACTTCTGAATTGTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTAT-GAAATGATTATAATACAATGCTAACCTTGAAGGAACTTTGTGAAA ..:.....x..:...--.x...:x..:.--.......--------.xx...:.x.::xx:.x..x.:x.x:x..x.:..:............:..:x.........::..x:.....:.:......:.:..x:.:.-:...:::xx.....--.:...:x.....:x.:.:x:x..x...:. 15M2I11M2D7M8D91M1D14M2I29M 109/167 65.3% 171/94230402 0.0% 15/167 9.0% 140729233 49485322 +3208 chr4 + 190214555 152676459 152676458 152676515 57 TGTGACCTTGGGCAAGTCACTTAGCCTCTCTGTGCCTCAGTTTTCTCAAATGTAAAA chr4 - 94230402 10384344 10384343 10384400 83846003 83846002 83846059 57 TATGACCTTGGGCAAGACGCTTAGTTTCTTTGAGCTTCAGTTTGTACAGCTGTAGAA .:..............x.:.....::...:..x..:.......x:x..:x....:.. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 142292115 47922440 +3035 chr4 + 190214555 152732023 152732022 152732074 52 AAAAAAAAAAAAAAAAAAAAAAAGGTGGGGAGAGAGGGAGAGAAAATGGAAC chr4 - 94230402 88558248 88558247 88558299 5672104 5672103 5672155 52 AAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAAAC ...:.x...................xx...:.:.:...x:......:::... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 64173775 NA +3235 chr4 + 190214555 152754097 152754096 152754149 53 AAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGGAAAAAAAGGGGGTAGAC chr4 - 94230402 37322393 37322392 37322445 56907958 56907957 56908010 53 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGAC .....:..........:.....:...:....:.x...::.::.::....:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 115431704 74782851 +3015 chr4 + 190214555 152754108 152754107 152754161 54 AAAAAGAAAGAAAGAAAGAAAAAGGAAAAAAAGGGGGTAGACATAGAAGTTTAT chr4 - 94230402 25781764 25781763 25781817 68448586 68448585 68448639 54 AAAGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAATTTAAATTAAT ...:.:..................:....x.:...:.x...x..xx..:..x.. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 126972344 63242211 +3070 chr4 + 190214555 152772408 152772407 152772468 61 GTGATCCCAGGTAATTTACTTAACCATATGAAGCTTCAGCTTCCTTATCTGTAAAATGGGA chr4 - 94230402 42976387 42976386 42976447 51253956 51253955 51254016 61 GTGATCCTGTGTAAGTCACTTCACCTCTTGAGGCCTTTGTTTCCTTTTCTGGAAAATGGGA .......::x....x.:....x...x:x...:..:.:x.:......x....x......... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 109796021 80418534 +3050 chr4 + 190214555 152773612 152773611 152773665 54 CACCAACCTAAGCCAGCATTTCCAATGCCTTAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 58801900 58801899 58801953 35428450 35428449 35428503 54 CACCAAATTAAGCTGTTTTTCCTAATGCTTAAAAAAAAAAAAAAAGAAGAAAAA ......x:.....::x:x..:.:.....:.x..............:..:..... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 93971712 NA +3046 chr4 + 190214555 152773616 152773615 152773668 53 AACCTAAGCCAGCATTTCCAATGCCTTAAAAAAAAAAAAAAAAAAAAAAAAGC chr4 - 94230402 49431428 49431427 49431480 44798923 44798922 44798975 53 AACATAATCCTGAATTTCAGGTTCTTTAAAGAAAGAAAAAAAAAAAAAAAAGC ...x...x..x.x.....x::.x.:.....:...:.................. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 103342188 86872367 +3276 chr4 + 190214555 152777589 152777588 152777677 89 GGAGGGAGGGAGGGAAGGAGGAAAGAAAAAGAGGAAGAAGGAAGGAAGGAGAAGGGAGGGAGACAAGAAGGAAAGGAGGAAAGAAAAAG chr4 - 94230402 40465775 40465774 40465863 53764540 53764539 53764628 89 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAG ....:::..:x.:x...:.x..:.:..::x:::....x.:.::.:..x.:.x:x........:x..::..........::::....... 89M 54/89 60.7% 89/94230402 0.0% 0/89 0.0% 112311814 77902741 +3007 chr4 + 190214555 152795832 152795831 152795898 67 TTTTTTTTTTTTTTTTTTTTTGGTGAATTGACTGTCTTTTTTCCTGTATCTGATTTTTGGTCCTTTT chr4 - 94230402 31668162 31668161 31668228 62562175 62562174 62562241 67 TCTTTTTTTTTTTTTTTTTTTGCTAAGTTACCTGTACTCCTTCTTAAAATTGACTTTTCAGCCATTT .:....................x.:.:..:x....x:.::...:.:x.x:...:....x:x..x... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 121127670 69086885 +3542 chr4 + 190214555 152804065 152804064 152804235 171 TAATATATATTATATATA---ATATAACGTAATATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTA chr4 - 94230402 48211458 48211457 48211620 46018783 46018782 46018945 163 TAACCTTTATCATATCTATACATACGAC-TAATATATTCTATGTACTGTATA-------TTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT---TAACATAAAATGTCTTA ...:x.x...:....x..---...::..-........x:...:..:x:....-------....x.x........x....:x...:.x.xx:....xx:.:.xx.....x...:..:x..x...x.xx:..x:x..:.:...:.x...xx.xx..---...:....x....x... 18M3I7M1D23M7D95M3D17M 108/160 67.5% 163/94230402 0.0% 14/160 8.8% 104592607 85621948 +3613 chr4 + 190214555 152804091 152804090 152804263 173 TAATATATATTATATATA---ATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATTATATATAATATAACATGTATTATATATAATATATAATATAACATGTATTA chr4 - 94230402 48211458 48211457 48211620 46018783 46018782 46018945 163 TAACCTTTATCATATCTATACATACGAC-----TAATATATTCTATGTACTGTA-----TATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT---TAACATAAAATGTCTTA ...:x.x...:....x..---...::..-----.x.......x...:..x.:..-----......x.x........x....:x...:.x.xx:....xx:.:.xx.....x...:..:x..x...x.xx:..x:x..:.:...:.x...xx.x:..---...:....x....x... 18M3I7M5D21M5D97M3D17M 109/160 68.1% 163/94230402 0.0% 16/160 10.0% 104592633 85621922 +4714 chr4 + 190214555 152804343 152804342 152804521 179 TATAATATAACATGTAT--TATATATTATATATAATA--TAACATGTATTATATATTA--TATATAA---TATAACATGTATTATATATT----------ATATATAATATAACATGTATTATATATATTATATATAATATATAATATATATAATATATATTATTTATATA------TATATAATATATATATATATATAGTTG chr4 - 94230402 30253314 30253313 30253517 63976886 63976885 63977089 204 tataatataatgtctaaaatatatataatttaaaataaatatcaaataatttatGTTAGTCATATAAAACTGTAGTATATAGTCTATAGTTAAAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGTTTATACATCTGCATTTG ..........::.x..x--.......x..x..x....--..x..x:..x.x...:...--:......---.:..::..:..x.x....x.----------..:....x.:...x..:.:.x:...........x...x:...:.......::.xx::......:x...:..------...x.x..:.x....:..x.::.x... 17M2I18M2I19M2I7M3I20M10I71M6I27M 128/179 71.5% 204/94230402 0.0% 25/179 14.0% 122551029 67663526 +3033 chr4 + 190214555 152847111 152847110 152847162 52 TTTTAGGTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCA chr4 - 94230402 66733450 66733449 66733501 27496902 27496901 27496953 52 TTTGAGATCTGTTCCTTTTTTCTTTTTTCTTTTTTTTTCAAAGAAAGTTTTA ...x..:.:.....:......:......:.........x.:.x.:...:.:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 86113661 NA +3453 chr4 + 190214555 152889519 152889518 152889627 109 ATATATATATATATATACACCTATTTTTGTGTGTGTGTGTATATTTATGTGTATATATAAATATATATACACATAAATATATATATACTATATATACATATATATACTA chr4 - 94230402 68558024 68558023 68558128 25672275 25672274 25672379 105 ATGCATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTA----GTAAATCTACACTCACATACACATTTTTCTCTTTATGCCATATATACATATATATCCCA ..::....::.:.:.x:..:x:..x.x:....:.:....:.....x----...x..x..x.:x:.:........xxx.x.x.x...:.:................x.:. 46M4D59M 70/105 66.7% 105/94230402 0.0% 4/105 3.8% 84331495 NA +3245 chr4 + 190214555 152889772 152889771 152889866 95 TACTATATATACTATAT--ATTATATACTATACTATATACTATATATATACTATATATACTATATACTATATATATACTATATATACTATATATACT chr4 - 94230402 67910059 67910058 67910155 26320248 26320247 26320344 97 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATT ..:..:......x...:--.xx.........xxx...:.:x...x.....:.:......x......:x....:..xxx....:..::x.x...x.:. 17M2I78M 66/95 69.5% 97/94230402 0.0% 2/95 2.1% 84979713 NA +3046 chr4 + 190214555 152904149 152904148 152904211 63 ACCCATCACCTATATATATATGTGTGTGTGTGTATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681919 8681918 8681981 85548422 85548421 85548484 63 ATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTT .:....xx.:x.....x....:.:.:...:..:.:.:.:...:.....xx.:........... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 144222230 45992325 +3103 chr4 + 190214555 152904153 152904152 152904201 49 ATCACCTATATATATATGTGTGTGTGTGTATATATATATATATATATTT chr4 - 94230402 52579762 52579761 52579809 41650594 41650593 41650641 48 ATAACTCATA-AGATACGTGTGTGTGTGTATATATATATATATATGTTT ..x..::...-.x...:............................:... 10M1D38M 42/48 87.5% 48/94230402 0.0% 1/48 2.1% 100324391 89890164 +4163 chr4 + 190214555 152986748 152986747 152986927 180 AATTTTCTTTCTTTTCTTTCTTTCTTTT------TTCTTTCTGTCTCTCTCCTTTCTTTCTTTGTTTCTTTCTTTCTCTTTCTTTCTCTCTCCTTCCTTCCTTCTCTCTATTTTTCTTTCTTTCTTTC--TTTCTTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTCTTCCTTCC---TTTCTTTCTCTC chr4 - 94230402 34857664 34857663 34857853 59372550 59372549 59372739 190 AATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACC---CTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATTATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTCCTATTACTTCCCCTCGCATTACTTTCTCCC .....x.::.:.x..x......:..x..------...:..:.:.:x..:x..---....:x..::.x:....::.:.:x..x...:.:...:.::..:..x::.:.:::...x..x..x:.x.:....--...x..x..:x..x.....--.x.:....:...:.x:.x.....:::.---..x.......:. 28M6I18M3D73M2I19M2I27M3I12M 114/177 64.4% 190/94230402 0.0% 16/177 9.0% 118129084 72085471 +3331 chr4 + 190214555 152986892 152986891 152987002 111 CTTTCTTTCTTTCTTCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTTTC--TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTCTTTCTTTC chr4 - 94230402 14706441 14706440 14706551 79523852 79523851 79523962 111 CTTTCCTCCTTTCGGCTTCCGCCCTTTTTCTCTCTCTGGGTTTGATTCAGCCTGTTTCTTCCCACCGTGCTCTATGCCTTGTTTCC--CCCTTCTTCTCTCCTTCTGCCTTTC .....:.:.....xx.....x:.....:.:.......xxx...xx...--::.x......:.:x:.x.x..:.x.x:...x:..:.--:.:.....:...:::...x:..... 48M2I36M2D25M 72/109 66.1% 111/94230402 0.0% 4/109 3.7% 138280451 51934104 +3034 chr4 + 190214555 153009328 153009327 153009377 50 TTTTTCTTTTTCTTTTTTCTTTTTTTATTTTATTTTAATTGCTCACTTGG chr4 - 94230402 69710928 69710927 69710977 24519426 24519425 24519475 50 TTTTTTTTTTTCTTTTTCCTTTTTTTCTTCCATTAAAGTTTCTCATTTGG .....:...........:........x..::...xx.:..x....:.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 83298400 NA +3003 chr4 + 190214555 153027236 153027235 153027288 53 TACACACATACACAGACACATACACATATGCACACACATACACACATCATATA chr4 - 94230402 10572843 10572842 10572895 83657508 83657507 83657560 53 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACATCATACA ..x.:.:...:.x...x.:...:.:.............x...x........:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 142454393 47760162 +3135 chr4 + 190214555 153058170 153058169 153058237 68 TCTTTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597715 45597714 45597782 48632621 48632620 48632688 68 TCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .....:..x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 107460455 82754100 +3323 chr4 + 190214555 153058213 153058212 153058290 78 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTC----CTTCCTTCCTTCCTTCCTTCCTTCTTTC chr4 - 94230402 91731746 91731745 91731827 2498576 2498575 2498657 82 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTC ..::.:x.........x::..x.....:...::........:..:....:----x.::.....x.:::....:....x.:.. 50M4I28M 54/78 69.2% 82/94230402 0.0% 4/78 5.1% 61326467 NA +3054 chr4 + 190214555 153066372 153066371 153066448 77 TAAAATCTCTCTCTCTTTTTCTATGTACACACACACACACACACACACACACACACACACACACACACGCACACAGA chr4 - 94230402 44143192 44143191 44143263 50087140 50087139 50087211 72 TAAAATAACTGTTTCTTTTTTTAAATACACACACACACACACAAAAAAGCCCTCACAC-----CATAACCACTCAGA ......xx..x.:.......:..x:..................x.x.x:.x.x.....-----..:.xx...x.... 58M5D14M 55/72 76.4% 72/94230402 0.0% 5/72 6.9% 108923180 81291375 +3142 chr4 + 190214555 153109331 153109330 153109369 39 CTGTCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAAAA chr4 - 94230402 87676342 87676341 87676380 6554023 6554022 6554061 39 CTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA ..::..............................:.:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 65432989 NA +4443 chr4 + 190214555 153141499 153141498 153141689 191 CTTTTCTTTCTTTTCCTCTTTCTTTCTTTCTGTTTTCTTTCTTTCTCT--------TTCTTTCTCCTTCTTTCCTTCTTTCTCTTTCT-TTCTTTCTTTTTCTTTCTTTC---------TTCTTTTCCTTCCT----------------------TCCTTCCCTCCCTCCCTCCCT------------------------------------------------------------CCCTTCATTCCTTCCTTCCTACCTTCCCTCCCTCCCTCCCTCCCTCCTCCCTTCC chr4 - 94230402 59491177 59491176 59491466 34738937 34738936 34739226 290 ctcttctttcccctgcccttgcttctcctctcttttcttttcctgtctAAAAAATGTTCCTTTTCCTT-TGGCTGTATTTCACATTCTGCTTTTTCTTTCCCTATCTTCCCCCTAGTGTTTATTTTCCTCCCCCATAAGAGCTTGTGGGCCCTCCTCCCTCCCTATCTCCCTCACTGTGAATGCCATTACCCTTGGGACAGCAAGAAAATTTCCAGATGTAAACAAAAACATAAATCCCTTTACTTCTCTGCTCCTACCTTCCTCTCCTCCATCTCTACCCCCTCCCTTTC ..:.......:::.x.:...x...::::...x........:::.x...--------...:..:.....-.xx.:x.x....x.x....-:.:.......::..x....:.---------..x.......:..:----------------------...:.....x:.......x..------------------------------------------------------------.....:.:.:..::x:...........:::.....x..:..x..:........:. 48M8I12M1D19M1I21M9I14M22I21M60I55M 137/190 72.1% 290/94230402 0.0% 101/190 53.2% 93650322 NA +4071 chr4 + 190214555 153141537 153141536 153141706 170 TTCTTTCTCTTTCTTTCTCCTTCTTTCCTT--CTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCTTTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCATTCCTTCCTTCCTACCTTCCCTCCCTCCCTCCCTCCCTCCTCCCTTCCCTTCCCTTCCCTTTCTT chr4 - 94230402 45185583 45185582 45185751 49044652 49044651 49044820 169 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACT-CTTCCCTTTCTCACTTAGTGC--TTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..x...x..:.::...:.:..xx:..:--:.....x:...x...........::..:x...:.:x::..:....:...:..xx..-.:.....::...x...x:.x.--.:..:x....:.x:.:.:.:xx..x...::xx..::::x...::...:...:xx.:.:.. 30M2I56M1D21M2D60M 101/167 60.5% 169/94230402 0.0% 5/167 3.0% 107955954 82258601 +3765 chr4 + 190214555 153141540 153141539 153141719 180 TTTCTCTTTCTTTCTCCTTCTTTCCTTCTTTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTCTTTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCATTCCTTCCTTCCTACCTT-----CCCTCCCTCCCTCCCTCCCTCCTCCCTTCCCTTCCCTTCCCTTTCTTTCTTTTTTTTTTT chr4 - 94230402 45185576 45185575 45185751 49044652 49044651 49044827 176 TTTATGCTTATTGCTCATT--TTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTT-------TTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ...x.x:..x..x...x..--....:....:..xx.:::xx:.....x:...x.........-------...:...x..::::x...::..:.:.:.:..x.:..:.:....:..xx...-----::...x..x.:.x:..::..xx:.x.::.:xx..:...x:::..:.:.....xx.:.... 19M2D41M7D51M5I60M 104/171 60.8% 176/94230402 0.0% 14/171 8.2% 107955964 82258591 +3034 chr4 + 190214555 153174988 153174987 153175022 35 TTGTTGTTGTTTTGTTTTTGTTTTGTTTTGTTTTT chr4 - 94230402 49078771 49078770 49078805 45151598 45151597 45151632 35 TTGTTGTTGTTTTGTTTTTTTTTTGTTTTGTTTTT ...................x............... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 104096217 86118338 +3139 chr4 + 190214555 153200773 153200772 153200824 52 TGGCACCTCATTGTGGTTTTTTTTCTTTTTTTTTTTCCTTATTATTGTTATT chr4 - 94230402 21317137 21317136 21317188 72913215 72913214 72913266 52 TGACATCTCCTTGTGGTTTATTCTCTTTTTATCTCTCCTTCCTATTGCTATT ..:..:...x.........x..:.......x.:.:.....x:.....:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 131883636 58330919 +3014 chr4 + 190214555 153203404 153203403 153203456 53 CACACACACACACACACACACACACACACGAAGAAGAACATAAACACATCAAA chr4 - 94230402 56248440 56248439 56248492 37981911 37981910 37981963 53 CAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAA ..x.x...x...............:....:..x..x....x....x..x.... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 96954964 93259591 +3008 chr4 + 190214555 153210050 153210049 153210091 42 GTGATTTAATTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 67837414 67837413 67837455 26392948 26392947 26392989 42 GTGATTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAG .......x...x.:.......................x:... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 85372636 NA +3595 chr4 + 190214555 153213603 153213602 153213685 83 CTGCAACCTCTGCCTCCCGAGTTCAAGCAATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx:x..:.:.:.......::x...x.xx.x.........:...........:.:....x.....--....::.. 73M2D8M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 135016477 55198078 +3179 chr4 + 190214555 153221827 153221826 153221909 83 TGAAGGAAGGAAGGAAAGCGCGAGGAAAGAAGAGAG-AGAGGAAGGAAGGGAAGGAGGAAGGAAGGAAGGAGGGAGGAAGGAAG chr4 - 94230402 93208493 93208492 93208575 1021828 1021827 1021910 83 TGAAGGATGGATGGAGAGCGTGGAGGAGGGAGCGGGTGGTGGAAGGAAGGGCA-GAGGATGGATGGCATAAGGGACCAATGAAG .......x...x...:....:.::.:.:.:..x.:.-:.x...........x.-.....x...x..x.x:.....xx..x.... 36M1I16M1D30M 60/82 73.2% 83/94230402 0.0% 2/82 2.4% 60013334 NA +3698 chr4 + 190214555 153221856 153221855 153221997 142 AAGAGAGAGAGGAAGGAAGGGAAGGAGGAAGGAAGGAAGGAGGGAGGAAGGAAGGGAGGGAG-----GGAGAGGGAGAAAAGGAACGAAAGAGTGAGGAAGGAAGGAAAGAG----------------GGAGGAAGGGAGGAAGGAAGGAAGGGAGAGAGGAA chr4 - 94230402 44053977 44053976 44054136 50176267 50176266 50176426 160 AAGGGATATGTGAAGAATGG--AGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAAT-ACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ...:..x.x:x....:.x..--.....:...:..:.......:x.:...::x:......x:.-----.:...::..:.:...:x.x:..x..:.-.x:...:.x:......:----------------...x:....:..:.....::.x..x....x..:.. 20M2D40M5I27M1D17M16I35M 93/139 66.9% 160/94230402 0.0% 24/139 17.3% 109167879 81046676 +3196 chr4 + 190214555 153221952 153221951 153222050 99 GAAGGAAAGAGGGAGGAAGGGAGGAAGGAAGGAAGGGAGAGAGGAAGGAAGGAAAGAAGGAAGGAAAGAGCAAGGAAGGAAGGAAAGAGCGAGGAAGGG chr4 - 94230402 76099074 76099073 76099170 18131233 18131232 18131329 97 GATAGAGAAAGAGAAGAGGTGAGGGCTG--GGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAG ..x:..:.:..:..:..:.x....:xx.--..:......x..:....:....:::::xxx:....::x..x...::.:...x....:.:....x...:. 28M2D69M 61/97 62.9% 97/94230402 0.0% 2/97 2.1% 77122878 NA +3047 chr4 + 190214555 153239348 153239347 153239418 71 TCTCAAAAAAAAAAAAAAAAGAACTCTGGCTTTGATAGAATTGTTTTGGAGATTTTATCATAAAGATAGTG chr4 - 94230402 29062625 29062624 29062691 65167712 65167711 65167778 67 TTTCAGAAGAAAAAAAGAAAGGACTCCGAATTGTACAGAATTGTTTCATAGATTCT----TTAAAACAGTG .:...:..:.......:....:....:.:x..xx.:..........::x.....:.----.x..:.:.... 56M4D11M 49/67 73.1% 67/94230402 0.0% 4/67 6.0% 124176723 66037832 +3147 chr4 + 190214555 153265307 153265306 153265362 56 AAGTTTTTTTTTGTTTTGTTTTGTTTTTTGTGTTTTTTTTTGTTATTTTTTTTTTT chr4 - 94230402 31237340 31237339 31237395 62993008 62993007 62993063 56 AAGTTTTTTATTGTTTTGTTGTTTGTTTTGTGTTTTTTTTTTTTAATACTGTTGTT .........x..........x.x.x................x...x.x:.x..x.. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 122027967 68186588 +3161 chr4 + 190214555 153271553 153271552 153271639 87 TGTTTTGGGTTGTTGTGGGGTTTTGTGTGTGTGCGTGTGCTTGTGTATATGGGTTTTGG-----TTTGTTTT---AGTGGTGGTATATAGGGCAC chr4 - 94230402 13534418 13534417 13534511 80695892 80695891 80695985 94 TGATTTAAAATGTTA-GGGGTTGTGTGTGTGTGTGTGTGCTTGTGTTAATGGTTTTAGAGCCATTTTATTTTTTCACTGCTGGATTATGGGACAC ..x...:::x....:-......x..........:............xx....x...x.:-----...:....---.x..x...xx...:..:... 15M1D43M5I8M3I20M 66/86 76.7% 94/94230402 0.0% 9/86 10.5% 139737135 50477420 +3267 chr4 + 190214555 153282510 153282509 153282565 56 AAGTGAGACCCTTTCTCTACAAAAGTAAATAAATACATAAATACAAGATAAAAAAT chr4 - 94230402 51199080 51199079 51199135 43031268 43031267 43031323 56 AAGTGAAACTTTTTACTTGCAAAAATAAGTAGATACATAAATGTAATACAAAAAAT ......:..::...x::.:.....:...:..:..........::..x.:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 102083430 88131125 +3192 chr4 + 190214555 153306206 153306205 153306257 52 ATTTAACCTCTCTGTGCCTTAGTTTCTTTATCTGTAAAATGGGAATGATATT chr4 - 94230402 66214154 66214153 66214205 28016198 28016197 28016249 52 ACTAAGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATT .:.x.:.........::.x:::.....::.................:..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 87092052 NA +3138 chr4 + 190214555 153349093 153349092 153349137 45 TCTTTTTTTTTTTTTTTTCTGTAAACCTTTGGTTTGGAGGAAATT chr4 - 94230402 64168297 64168296 64168341 30062062 30062061 30062106 45 TCTTTTTTTTTTTCTTTTCAGTAAACATCTAGTTTGGAAGAAGTT .............:.....x......x.:.:.......:...:.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 89180796 NA +3453 chr4 + 190214555 153353795 153353794 153353866 72 CTGCAGCCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCCTCAGTCTCTCGAGTAGCTGGGATTACTGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:xx.x..:.::........:.x...x.:x.x.....:..:..:.........:.:...xx.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 135156669 55057886 +3587 chr4 + 190214555 153359876 153359875 153359936 61 CTCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:x..........x...x.xx.x.........:...........:::....x...... 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 135162737 55051818 +3840 chr4 + 190214555 153360558 153360557 153360662 105 TTTAGTATAATTTACTT-CTTTTCTGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATACACATAAAAA-------TACACACATATATACACAAAAATATATAAATATT chr4 - 94230402 50558487 50558486 50558599 43671804 43671803 43671916 113 TTTAAAAAACTTTGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAGATTTACAGAAAAATATAGAAGTTTT ....:x.x.x...:...-....xx..:......x..........::........:..:....x...x.:...-------.x:.xxx.x..x....x.........x..:.x.. 17M1I54M7I34M 78/105 74.3% 113/94230402 0.0% 8/105 7.6% 102802071 87412484 +3468 chr4 + 190214555 153360581 153360580 153360660 80 TGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATACACATAAAAATACACACATATATACACAAAAATATATAAATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:......::.:x:::...:.x..:....:...:.x:.:.xx..........:.:.:.....:.x.:.x..:.... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 144964790 45249765 +3521 chr4 + 190214555 153360728 153360727 153360813 86 GCTTTGTGTGTATATGTATATACACATATATACACACATATACATATACACATATATACACATATATTCATATATACACATATATA chr4 - 94230402 8395785 8395784 8395870 85834533 85834532 85834618 86 GCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:x.........:...::...x....:...x:...:..:..:::x....:xx...:.....:.:.:x..:.x.:...x..:x... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 144964943 45249612 +3293 chr4 + 190214555 153379280 153379279 153379396 117 ACTCTGTCTCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAACCACAAAAGCTACATATTCTATTTTAAAATACTGATATTTCCATTTTTTAAGTAAG chr4 - 94230402 49250041 49250040 49250150 44980253 44980252 44980362 110 ATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAACTACATTC-CTTTATATGTTCTTTGCAA------ATGTTTGCATTTTCCAAGCAGG .::..:.:xx.......:.......:....:.x:...........:::..::xx...x:...:...xxx-..x:....x:.x...xx..------..:...x......::...:.:. 69M1D19M6D22M 73/110 66.4% 110/94230402 0.0% 7/110 6.4% 104129239 86085316 +3016 chr4 + 190214555 153379289 153379288 153379341 53 CAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAAC chr4 - 94230402 57329419 57329418 57329471 36900932 36900931 36900984 53 CAAGAAAAAGCCAGAAGAGGAAGAAGAGGAAAAAAAAAAAACAAAACAGCAAC ...:.....:xx.:....:........:...:....:....x....x..x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 96049870 94164685 +3016 chr4 + 190214555 153379293 153379292 153379345 53 AAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAGAAACCACA chr4 - 94230402 57329420 57329419 57329472 36900931 36900930 36900983 53 AAGAAAAAGCCAGAAGAGGAAGAAGAGGAAAAAAAAAAAACAAAACAGCAACA ..:.....:xx......:........:.....:.......x...:x.:.x... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 96049873 94164682 +3258 chr4 + 190214555 153381641 153381640 153381724 84 TGCTATATATATAATATATATAATATAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA chr4 - 94230402 4200251 4200250 4200333 90030070 90030069 90030152 83 TGCTACATTTCTACCA-GTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGTTA .....:..x.x..x:.-:..x...xx:............:.:.:..............::...:xxx.......x...:xx... 16M1D67M 60/83 72.3% 83/94230402 0.0% 1/83 1.2% 149181390 41033165 +3025 chr4 + 190214555 153381661 153381660 153381720 60 TAATATAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200268 4200267 4200327 90030076 90030075 90030135 60 TAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ...x..x.x............:.:.:.......x......::...:xxx.......x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 149181393 41033162 +3039 chr4 + 190214555 153381668 153381667 153381720 53 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ....x.....:...:..:.:......x.x......:.x.........:.x... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 60646317 NA +3137 chr4 + 190214555 153381668 153381667 153381725 58 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA chr4 - 94230402 92735353 92735352 92735410 1494993 1494992 1495050 58 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAA ..x.....:...:..:.:........x......:.x.........:.x...:::.x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 60646315 NA +3217 chr4 + 190214555 153381669 153381668 153381716 48 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735403 1495000 1494999 1495047 48 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....:...:..:.:...............:.x.........:.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 60646313 NA +3179 chr4 + 190214555 153391252 153391251 153391321 70 CTCCCAGGTTCAAGCGATTCTTGTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGTGTGCGCCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.::........:.x...x::x.x........:..:.........:.:..:.--:....:....:::. 54M2D14M 48/68 70.6% 68/94230402 0.0% 2/68 2.9% 135194113 55020442 +3120 chr4 + 190214555 153392177 153392176 153392250 74 CTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAAGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:x.:xx.x..:.:.......x.:xx...x.xx:x........::...........:......x.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 135195051 55019504 +3486 chr4 + 190214555 153412893 153412892 153412963 71 CTCCCGGGTTCAAGCGATTCCCCTGCCTCAGCCTCTGGAATAGCTGGGACTACAGGCGCACACCACCATGT chr4 - 94230402 18197139 18197138 18197207 76033196 76033195 76033264 69 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:.:.........:.x...x.xx.x........:.x:.:.......:......--..::......::... 54M2D15M 52/69 75.4% 69/94230402 0.0% 2/69 2.9% 135215754 54998801 +3086 chr4 + 190214555 153414953 153414952 153415042 90 CTGTGTTTATCATTTTATTAATGTTAAATAAAGTGTAAAATGCAGATGTTCTTCACCCCTTTTGGTAGAACAAAAGCAGGATGATAACCA chr4 - 94230402 29097442 29097441 29097531 65132872 65132871 65132961 90 CTTTCTTTCTTATTTAATTAATGTTAAAATGAGTGTAAAATTATTACGTCCTCCATCACTTTTTACATAATACACACAGCCTAATTGCCA ..x.x...x.:....x............xx:..........xxxx.:..:..:..:.x.....x::.x..:.x.x:...xx.:..x:... 90M 60/90 66.7% 90/94230402 0.0% 0/90 0.0% 124317511 65897044 +3091 chr4 + 190214555 153423128 153423127 153423175 48 CAAACACACACACACACACACACACATATATATATATATATATTTATT chr4 - 94230402 87372747 87372746 87372794 6857609 6857608 6857656 48 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATT ..............x.........:x....::...:..::...x.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 66050381 NA +3264 chr4 + 190214555 153427420 153427419 153427487 68 TCACTGCTTCTAAATATTCTGTTGAAATATGTGAAAAGTTAACTTTTTTTTTGAGACAGAGTCTTACT chr4 - 94230402 50621098 50621097 50621165 43609238 43609237 43609305 68 TCATTGCTTCTTTAGCTTATGTTGAAATATATGTATAGTTATTTGTTTTTTAGAAGCAGAATCTGACT ...:.......xx.xx..x...........:..x.x.....x:.x......x..::....:...x... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 102806322 87408233 +3103 chr4 + 190214555 153435276 153435275 153435337 62 CTTTCTAGGGTGGGATTTTTGTTGTTGTTGTTGTTGTTGTGTTTCCTTTTGTTTTGTTTTTT chr4 - 94230402 33381004 33381003 33381065 60849338 60849337 60849399 62 CCTCATAAATTGCGATTTTTGTTGTTGCTGCTATTGTTGTTTTTTGTTGGGTTTGGTTTTTT .:.:x..::x..x..............:..:.:.......x...:x..xx....x....... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 120054272 70160283 +3122 chr4 + 190214555 153435283 153435282 153435334 52 GGGTGGGATTTTTGTTGTTGTTGTTGTTGTTGTGTTTCCTTTTGTTTTGTTT chr4 - 94230402 25791804 25791803 25791855 68438548 68438547 68438599 52 GGATGGGATTTTTTTTTTTGTCGTTGTTGTTGGGGTTTTTTTTTGTTTGTTT ..:..........x..x....:..........x.x..::....xx....... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 127643479 62571076 +3232 chr4 + 190214555 153435291 153435290 153435339 49 TTTTTGTTGTTGTTGTTGTTGTTGTGTTTCCTTTTGTTTTGTTTTTTGA chr4 - 94230402 44858316 44858315 44858364 49372039 49372038 49372087 49 TTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTTTTGTTTGTTTTTTTGA .....x.........:..:.........x::........xx........ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 108576975 81637580 +3147 chr4 + 190214555 153436561 153436560 153436608 48 CCCTCCCTTCCTTCTTTCTCTTTCTCTCTTTCTCTCTTTCCTTCTTTC chr4 - 94230402 39570328 39570327 39570375 54660028 54660027 54660075 48 CTTTCTCTTCCTTTTTTCGCTTTCACCCTTTCTCTCTTTCCATTTTTC .::..:.......:....x.....x.:..............x.:.... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 113866233 76348322 +3239 chr4 + 190214555 153448741 153448740 153448824 84 TATATAATGTAGTCTTGCTTTC--ATGTCTCTCTCTCTCTCTATCTCTCTCTTTTTTTTTTTTTTTCCTTTTTGAGACAGGGTCTT chr4 - 94230402 49339945 49339944 49340026 44890377 44890376 44890458 82 TATTTGGTTTAGCATTTCTTTTTGATGTATTTCTCCTTCTCT----CTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAGGTATT ...x.::.x...:x..x....:--....x.:....::.....----......:.................x.x..:.x::...x.. 22M2I18M4D40M 60/80 75.0% 82/94230402 0.0% 6/80 7.5% 104108796 86105759 +3315 chr4 + 190214555 153453727 153453726 153453791 65 AGACTACTTCACAGTTGAGAAATGAAGGCACAGAGAGGTTAAGAAACTTGCTGAAGGCCCCACAG chr4 - 94230402 18690944 18690943 18691008 75539395 75539394 75539459 65 AGCCTATTTTACATATGGGGAATGGAGGCATAGAAAGATTAAGAGATTTGCTAAAGATTACAGAG ..x...:..:...xx..:.:....:.....:...:..:......:.:.....:...:::x..x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 134762783 55451772 +3315 chr4 + 190214555 153453727 153453726 153453791 65 AGACTACTTCACAGTTGAGAAATGAAGGCACAGAGAGGTTAAGAAACTTGCTGAAGGCCCCACAG chr4 - 94230402 18687881 18687880 18687945 75542458 75542457 75542522 65 AGCCTATTTTACATATGGGGAATGGAGGCATAGAAAGATTAAGAGATTTGCTAAAGATTACAGAG ..x...:..:...xx..:.:....:.....:...:..:......:.:.....:...:::x..x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 134765846 55448709 +3521 chr4 + 190214555 153469315 153469314 153469364 50 ACACACACACACACACACACACACACGTGTGTATGTGTGTGTATATATAT chr4 - 94230402 49987095 49987094 49987144 44243259 44243258 44243308 50 ATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGTGtatat .:.:.:.....x....................:.......x.:.:..... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 103482220 86732335 +3182 chr4 + 190214555 153469318 153469317 153469372 55 CACACACACACACACACACACACGTGTGTATGTGTGTGTATATATATCTCATAAG chr4 - 94230402 87372747 87372746 87372801 6857602 6857601 6857656 55 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAG ..x...........x........:.x.:..:..:...:::.......:..x.:.. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 66096571 NA +3145 chr4 + 190214555 153469915 153469914 153469969 55 AAACTTTGTCTCAAAAAACAAACAAACAAACAAACAAACAAAAAAACCAGTAACA chr4 - 94230402 38453246 38453245 38453300 55777103 55777102 55777157 55 AAGCCTTATCTTAAAAAACAAACAAACAAAACAACAATAACAAAAAACAGTTACA ..:.:..:...:..................xx.....xx.x.....x....x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 115016669 75197886 +3484 chr4 + 190214555 153474631 153474630 153474713 83 CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCGTGTGTCAACATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........::x...x.xx.x........:............:.:....--....:::..x::.. 67M2D14M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 135277505 54937050 +3275 chr4 + 190214555 153482655 153482654 153482740 86 TGTCATAGTGAACTGCAGCCTGGACTTCATGGGCTTAAGCAGTCCTTCCGCCTCAGCCTCTCCAGTAGCTGGGGCTACAGGTACAC chr4 - 94230402 18197114 18197113 18197199 76033204 76033203 76033289 86 TGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..x...x:..xx..:.....:::.x:.:x....:.:...::x.:.x:xx.x........:..x.........::.....x..:... 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 135285541 54929014 +3139 chr4 + 190214555 153487699 153487698 153487738 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 134505384 55709171 +3102 chr4 + 190214555 153487701 153487700 153487736 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 71858637 NA +3253 chr4 + 190214555 153487701 153487700 153487739 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..................x.................::. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 134505386 55709169 +3316 chr4 + 190214555 153487703 153487702 153487738 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 71858639 NA +3438 chr4 + 190214555 153487703 153487702 153487738 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982350 75248053 75248052 75248088 36 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG .................................... 36M 36/36 100.0% 36/94230402 0.0% 0/36 0.0% 134505388 55709167 +3002 chr4 + 190214555 153487705 153487704 153487739 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 71858641 NA +3124 chr4 + 190214555 153487705 153487704 153487739 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982349 75248054 75248053 75248088 35 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA ................x.................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 134505390 55709165 +3953 chr4 + 190214555 153505182 153505181 153505260 79 CTGCAACCTCTGCCTTCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCACGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x....:...........x...x.xx.x........:..:.........:......--.::....... 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 135308056 54906499 +3075 chr4 + 190214555 153506849 153506848 153506899 51 AAAAAAAAAAAAAGAAGAAAGAAAAAAAGAGTATTTACTACTTTATTTACA chr4 - 94230402 60643392 60643391 60643442 33586961 33586960 33587011 51 AAAAAAAATAAAAGAACAAAGAAAAGGAGAAAGTTTACTGCTCTGTTTGCA ........x.......x........::...:x:......:..:.:...:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 92863457 NA +3076 chr4 + 190214555 153579547 153579546 153579620 74 CTACAGCCTTGACCTCTTGGGCTCAATCAATCATCCCACCTCAGCCTTCCTAGTAGCTGGGACTATAAGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........:x:.x..::....:....x::x.:xx.xx:x.........:.x.........:....:.x.:.... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 135382421 54832134 +3152 chr4 + 190214555 153582205 153582204 153582282 78 TTTTATTCTTTGGGTTTTTTTGTTTGTTTTTTGGTTTTGTTTCTGTTTTTGTTTTTTTTAGACAGGATTTTGCTGTGT chr4 - 94230402 37610286 37610285 37610363 56620040 56620039 56620117 78 TTTTACTTGTTTGGCTTTTTTATTTGTTCTTTGGTAGTGGTTTGTTTTTTGGTTTGTGTGTGCATGATTTTCttatat .....:.:x..x..:......:......:......xx..x..:xx......x...x.x.:x:..x......x:.:.:. 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 115971919 74242636 +3524 chr4 + 190214555 153604793 153604792 153604861 69 CTCCTGGGTTCAAGTGATTCTCTTGCCTCAGTCTCTCGAGTAGCTGGGATTACAGGTGTGTGCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG-----CACCAC ..:.............x...x.xx.x.....:..:..:.........:.:....x...-----...... 58M5D6M 52/64 81.2% 64/94230402 0.0% 5/64 7.8% 135407654 54806901 +3012 chr4 + 190214555 153625902 153625901 153625937 36 TGTCTCAAAAAAAACAAAACAACAACAACAAAAAGA chr4 - 94230402 4223941 4223940 4223976 90006427 90006426 90006462 36 TGTATCAAAAAAAACAAAACAACAACAACAAAAAAA ...x..............................:. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 149401961 40812594 +4239 chr4 + 190214555 153633292 153633291 153633374 83 CTGCAGCCTTGAACTCCTGGGTTCAAGCGGTTCTCCTGCCTCAGCCTCTCAAGTAACTGGGACTACAGGTGTGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:.....:x:.:..:...........:.x...x.xx.x........:.......:....:......--:...::....::.. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 135436166 54778389 +3451 chr4 + 190214555 153718193 153718192 153718295 103 ATTCCTTTCCTAAGGAGTTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTTTTTTTT-----------GAAGCAGATGCACTGGATCTA-----CTCCCAGAGATTCTGATTTACT chr4 - 94230402 66372526 66372525 66372643 27857760 27857759 27857877 118 ATTTCTGCTTTAAAGTGTATGTTTTTTTTCTTTGTTTGTTTGTTTGTTTTTCATTCCTTTTGCCATTCTGAAAAACAG-TGAATTAGATCTAGTCTGTTCCCAACAATTTTCAATTACT ...:..x:::...:.x..x.x....x...x.....................:x..::...-----------:..:...-..x.:.:......-----:.....:x:...:.x.x..... 60M11I7M1D13M5I22M 75/102 73.5% 118/94230402 0.0% 17/102 16.7% 87345667 NA +3262 chr4 + 190214555 153731650 153731649 153731731 82 AAGGAAAGAGAAAGAAAGAGAGAGAGGGAGGGAGGGAGGAAGGAAG-----------GAAGGAAGGAAGGAAACAAGGAAAAAAAGAAAAAAA chr4 - 94230402 76099077 76099076 76099169 18131234 18131233 18131326 93 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGA .::.........::::x...:.xx:.........x..:....:...-----------.:...x......::..x..x.......x..:x..:. 46M11I36M 58/82 70.7% 93/94230402 0.0% 11/82 13.4% 77632573 NA +3086 chr4 + 190214555 153734663 153734662 153734716 54 TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTTGTCCCGCTCTGTCGC chr4 - 94230402 5847642 5847641 5847695 88382708 88382707 88382761 54 TTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ....x.x:..............:.::.........x.:....::....:x.:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 147887021 42327534 +3196 chr4 + 190214555 153748832 153748831 153748886 55 CGCATTTAGCAAAAAAAACAAAAAACAAAAAACAAAAAAACAAAAAACAGGTTTG chr4 - 94230402 63770287 63770286 63770341 30460062 30460061 30460116 55 CGTTTCTGGGGAAAAAAACAAAAAACAAAACACAAAACAACAACAAACAGACTCG ..:x.:.:.x:...................x......x.....x......::.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 89978545 NA +3161 chr4 + 190214555 153753521 153753520 153753571 51 AAATAACTGTGTTTTTATCTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTT chr4 - 94230402 43295345 43295344 43295395 50935008 50935007 50935058 51 AAATAGCTGTTTTTGTACCTTTATTTCCCCTATCTCTCTCTTTTTTTTTTT .....:....x...x..:....x:.::.:..x................... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 110458176 79756379 +3300 chr4 + 190214555 153770690 153770689 153770756 67 CTGCAACCTCTGCCTCCTGGGTTCAAGGGATTCTTATGCCTCAGCCTCCCAAGTAGCTAGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:...........x.x...x:.x.x........::.........:.:.:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 135573564 54640991 +3147 chr4 + 190214555 153793613 153793612 153793674 62 TTCTGATTAAAAAACAACAACCAAAAAAAAAAAAAAAAACAAAAAAAACCACACACACAAAA chr4 - 94230402 61300743 61300742 61300804 32929599 32929598 32929660 62 TTCTTCTTAATTAACAACAACCAAAAAAAAAAGAAGCAAAAAGAAAAAAGAAACACCCAAGA ....xx....xx....................:..:x..x..:.....xx.x....x...:. 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 92492870 NA +3013 chr4 + 190214555 153801435 153801434 153801479 45 ACACATGCGTGCGTACATACATACACACACACACACACACACACA chr4 - 94230402 8395818 8395817 8395862 85834541 85834540 85834585 45 ACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...::...x.....xx...................x..... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 145405617 44808938 +3169 chr4 + 190214555 153802430 153802429 153802477 48 AAGCAGGTTTAAGTACATTAAAAACAAACAAACAAACACAAAAAAACC chr4 - 94230402 32779894 32779893 32779941 61450462 61450461 61450509 48 AAGGTGGTTTGGGTCAATTAAAAACAAACAAACAAACAAAAAAAAACC ...xx.....::..xx......................x......... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 121022536 69192019 +3247 chr4 + 190214555 153808805 153808804 153808906 102 TCCTTCCTTCCCTCCTTTCCTCCTTCCCTCCCTCCCTCCTTCCCTC---------CCTCCCTCCCTCCCTCCTTTCCTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCTTC chr4 - 94230402 81461673 81461672 81461782 12768621 12768620 12768730 110 TTCTTCCTTTTCTTTTTTTCTCCTGACTTCTCACCATGTTTCCTTCATTAAATGTCATCCATTCCACTTCTTGCTGTGCCTTCCCTCCC-CCTTCTCTTCTTGCCCCCTTC .:.......::..::...:.....xx.:..:.x..x.x:....:..---------.x...x.:..x.:::::x:.x:x...........-..:.....:.:.x..:..... 46M9I34M1D21M 67/101 66.3% 110/94230402 0.0% 10/101 9.9% 72347132 NA +3559 chr4 + 190214555 153808805 153808804 153808934 130 TCCTTCCTTCCCTCCTTTCCTCCTTCCCTCCCTC-CCTCCTTCCCTCCCTCCCTCCCTCCCTCCTTTCCTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCTTCCCTCCCTCCC--TCCTTCCCTCC--TTCCCTC chr4 - 94230402 26928842 26928841 26928976 67301427 67301426 67301561 135 TTCTCCCGCTTCTCGCATCCGCACCTCTGCCCTCGCTTCCTTCACCCGCTCCCTTCCCCCATCCTTTGTTTTTCACCACCTCGGATCTCCCCTTCCCCATCTCGCCCCCCCCCGGCCCATTCCCCCGATTCCCTC .:..:..x:::...x:x...x.x:::.:x.....-.:......x.:.x......:..:..x......x:.::.:x..x..::xxx....:..:....:x::..x.:...:...--:..x.:..:..--....... 34M1I78M2I11M2I7M 82/130 63.1% 135/94230402 0.0% 5/130 3.8% 126879963 63334592 +3033 chr4 + 190214555 153809119 153809118 153809168 50 GGCGTGTGCTAATTTTTGTGTGGTGTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 80532370 80532369 80532419 13697984 13697983 13698033 50 GGTGTGGGGTGGTTGTTGTGTGGTGGTTTTTTGTTGTTTTTTTTTTTTTT ..:...x.x.::..x..........x......x..x.............. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 73276749 NA +3274 chr4 + 190214555 153812498 153812497 153812591 94 CAGTGGGGACCTGTATTTCTACATGTGCCCTTATAAATATTTTAGCTAAATCAGGGTCTCAAATGTAAAATCTAGTTCCCTGGGGAACTTTTTA chr4 - 94230402 52656584 52656583 52656677 41573726 41573725 41573819 94 CAATAGGGATCTCTTTGCCTACTGGTGATATTACACGTATTTCAGCTAACTCAGCAATCTAAATGTAAAATCCAGCACTCAGGGATGATCTCTA ..:.:....:..x.x.x:....xx...x:x...:.x:.....:......x....x:x:::............:..:x.:.x...:x:x.:.:.. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 101155914 89058641 +3019 chr4 + 190214555 153821448 153821447 153821506 59 TTCATATTGACCTCAGAGTGGAAGGCTATCTTTTTTTTTTTTTTTTTTTTGAGACGGAG chr4 - 94230402 11615210 11615209 11615268 82615135 82615134 82615193 59 TCTATCTTGTTATCAAGATGAAATGTTATCTTTTTTTTTTTTTTTTTTTGGACACTGAG .::..x...x:x...:::..:..x.:.......................x..x..x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 142206238 48008317 +3134 chr4 + 190214555 153892404 153892403 153892466 63 TTTTTGTTGTAGTTGTTGTTGTCTTTTTTTTTTCCCTCAGTTGTTTAAACTATA----------TTTCTTTTC chr4 - 94230402 70893439 70893438 70893511 23336892 23336891 23336964 73 TTTTTGCTGTTGTTGTTGTTGTCTTTTTTTATTATCATCATTTTTTAAATTATGGAGCTGTTTTTTTCTTTTC ......:...x...................x..x:.x:x:..x......:...:----------......... 54M10I9M 51/63 81.0% 73/94230402 0.0% 10/63 15.9% 82998965 NA +3179 chr4 + 190214555 153910068 153910067 153910110 43 TGTGTGTATATATATATATGCATACATACACATACATATGTAT chr4 - 94230402 64433220 64433219 64433262 29797141 29797140 29797183 43 TGTGTGTATATATATCTACACATACACACGCATACGTATGTAT ...............x..::......:..:.....:....... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 89476848 NA +3066 chr4 + 190214555 153934926 153934925 153934977 52 GTGTGTGTGTGTGTGTGTGTGTGTGTATATTTTTTTATTTTTATTTTTTTTT chr4 - 94230402 49193410 49193409 49193461 45036942 45036941 45036993 52 GTTTTTTTGTGTGTGTGTGTATTTCTATGTTTTTTGGTTTTTGTTTTTTTTT ..x.x.x.............:.x.x...:......x:.....:......... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 104741516 85473039 +3613 chr4 + 190214555 153942934 153942933 153943031 98 TTTTCTCTTTTTTCTAGAAAATACTCAAACAATAGGAGAACTAAAAACAACAAGAAAAAAA-AAACCTCAAAATATATTTAATCAAAAG--TGAGAGGAAA chr4 - 94230402 62736213 62736212 62736313 31494090 31494089 31494190 101 TTTTCAATTTTTTATAGAACATACACAAACAACAAAAGAACAACAGAAAACAACAAGAAAGCAAACTTTACATGACATTAAATTGAGAGCTTCAGAGAAAA .....xx......x.....x....x.......:.::.....x.x.:.x.....x..:...:-....:.:.x.xx.:...x...::.:..--.x....:... 61M1I27M2I10M 71/98 72.4% 101/94230402 0.0% 3/98 3.1% 91206721 NA +3072 chr4 + 190214555 153974146 153974145 153974198 53 GCAAGAAAAAACAAACAAACAAAAAAATAAAACAAACAAAAAAATGGCAGAAT chr4 - 94230402 44210642 44210641 44210694 50019709 50019708 50019761 53 GCAAAAAAAAACAAACAAACAAAAAAATCAAGAAAATTAAAGAACGATATGAT ....:.......................x..:x...:x...:..:.::.x:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 109763504 80451051 +3514 chr4 + 190214555 153985211 153985210 153985294 84 ACTTTTCTACTCAGCTAGGTTATTTTGTTTTTGTTTTTGTTGTTGTTGTTGTTTGTATTTTAAGACAGGGTCTTGCTGTTGCCC chr4 - 94230402 35476386 35476385 35476464 58753939 58753938 58754017 79 ACTTTTCTATAAAGCTAG-----CTTGTTTTTTTTTTTGTTGTTGTTGTTCTGTTTTTTTTAATTCTAGGCTTTGCCATAGTCC .........:xx......-----:........x.................x.x.x.x......xx.x:..::....::.x.:.. 18M5D61M 60/79 75.9% 79/94230402 0.0% 5/79 6.3% 118508825 71705730 +3063 chr4 + 190214555 154000284 154000283 154000319 36 TGTGTGTGTGTGTGCATGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:...::.................... 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 72371220 NA +3409 chr4 + 190214555 154000284 154000283 154000340 57 TGTGTGTGTGTGTGCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATTTTTTTT chr4 - 94230402 18982315 18982314 18982364 75248039 75248038 75248088 50 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG-------GAAGGATTTATTTT ..............::....................-------..:.:....x.... 36M7D14M 45/50 90.0% 50/94230402 0.0% 7/50 14.0% 135017969 55196586 +3707 chr4 + 190214555 154001902 154001901 154001978 77 CATCTCAAAAAAAAAAAAAAAAAACAAAAAAAAAAACTCTCTCTCTTTATATATATATGTATATATACATATATATA chr4 - 94230402 86407063 86407062 86407139 7823264 7823263 7823340 77 CACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA ..::.....:x.............x:..x...:..x..:xxxx....:.:.x........:......:..:...:.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 67594839 NA +3206 chr4 + 190214555 154001911 154001910 154002002 92 AAAAAAAAAAAAAAACAAAAAAAAAAACTCTCTCTCTTTATATATATATGTATATATACATATATATATATACATATATATATGTATATATA chr4 - 94230402 16272555 16272554 16272631 77957772 77957771 77957848 77 AAAAAAAAAAAAAAACA---------------TCTTGTTATATATAATACTTTACATACATATATATAAACACATACATAAAAATAAGCATA .................---------------...:x.........xxxx.x..:.............x.:.....:...x.x:..x::... 17M15D60M 60/77 77.9% 77/94230402 0.0% 15/77 19.5% 137729356 52485199 +3022 chr4 + 190214555 154001923 154001922 154001984 62 AAACAAAA--AAAAAAACTCTCTCTCTTTATATATATATGTATATATACATATATATATATACA chr4 - 94230402 50291208 50291207 50291271 43939132 43939131 43939195 64 AAACAGAAGTAAATAAACACACTTTGTATTTCCATATGTGCATATATACATATGTATATATACA .....:..--...x....x.x..:.x.x.x.x:....:..:............:.......... 8M2I54M 49/62 79.0% 64/94230402 0.0% 2/62 3.2% 103710715 86503840 +3498 chr4 + 190214555 154001959 154001958 154002032 74 TGTATATATACATATATATATATACATATATATATGTATATATATATGTATATATATATATATATATATGTATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA ...:..:....x.:......:..:..:.x......xx:.:.....:.....:...x:.:.:.:.-......... 64M1D9M 54/73 74.0% 73/94230402 0.0% 1/73 1.4% 116638919 73575636 +3007 chr4 + 190214555 154001963 154001962 154002044 82 TATATACATATATATATATACATATATATATGTATATATATATGTATATATATATATATATATATGTATATATATCAGAGCT chr4 - 94230402 71630135 71630134 71630216 22600187 22600186 22600268 82 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATT ..::.:...::.....:.:...:.x.....::...x.x.:....:..:.:.x.::..:.:x......:.:.x.x:.x..::. 82M 51/82 62.2% 82/94230402 0.0% 0/82 0.0% 82371828 NA +3883 chr4 + 190214555 154011347 154011346 154011419 73 CAGAACGAGACTCCATCTCAAAAAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 4677566 4677565 4677638 89552765 89552764 89552837 73 CAAAACAAGACATCAAACAACAGAAACCAAACCAAACCAAACATTTAAAGTAAAAAAAAAAAAAAAAAGAAAA ..:...:....x:..xx:x.x.:....................xx:..:xx.................:.... 73M 56/73 76.7% 73/94230402 0.0% 0/73 0.0% 149333781 40880774 +3038 chr4 + 190214555 154011364 154011363 154011424 61 TCAAAAAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 4677578 4677577 4677638 89552765 89552764 89552825 61 TCAAACAACAGAAACCAAACCAAACCAAACATTTAAAGTAAAAAAAAAAAAAAAAAGAAAA .....x..xxx..............x.:xx.x:x...:x.................:.... 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 149333786 40880769 +3051 chr4 + 190214555 154011367 154011366 154011424 58 AAAAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 49262271 49262270 49262328 44968075 44968074 44968132 58 AAGAAAATAAAACTAACTAAACAAACAAACAAAAAAAAGGGAATAAAATAAAAGGAAA ..:...x:...x.x...:......:...:.........:::..x....x....::... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 104749096 85465459 +3113 chr4 + 190214555 154011368 154011367 154011431 64 AAAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 - 94230402 8876748 8876747 8876811 85353592 85353591 85353655 64 AAAGACCCAACTAAACCAACCAACCAACCAACAACAGCAACAAAATAATAAAGAAAAAAAATAA ...:...x...:.......x...x...x...x..x.:x..x....x..x...:........x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 145134620 45079935 +3091 chr4 + 190214555 154011369 154011368 154011418 50 AAAACCAAACCAAACCAAACAAGCAAGCAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 38540320 38540319 38540369 55690034 55690033 55690083 50 AAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAA ....x....x....x...........:...........xx..::..:... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 115471049 74743506 +3058 chr4 + 190214555 154020963 154020962 154021006 44 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735399 1495004 1495003 1495047 44 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .....:...:..:.:...............:.x.........:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 61285607 NA +3129 chr4 + 190214555 154026705 154026704 154026790 86 GAGCTTCTTTCTTTAA-----GTAGTTTATTCCCCCTTTCTCTGTAGAAATCTTCATTTACCTTTTCCTCGCTGACTTTTAAACGTGTGAT chr4 - 94230402 81942918 81942917 81943008 12287395 12287394 12287485 91 GACCTTCATCCTTAAATCGTAGTAATGGATTCCCCCTTTCTTTGTAGAAAACCTTATTCACAAATGTCTAACTGATTTTTAGGGATGGAAT ..x....x.:...x..-----...:.xx.............:........x.:.:...:..xxx.x:..x:....:.....::x:..x:.. 16M5I70M 60/86 69.8% 91/94230402 0.0% 5/86 5.8% 72083787 NA +3044 chr4 + 190214555 154028657 154028656 154028710 54 AATAGCAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAAAGAAGAAAGAAAGAAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ..x....:.....:...........:.....----...x..:...:.:.:.:...... 31M4I23M 44/54 81.5% 58/94230402 0.0% 4/54 7.4% 146317308 43897247 +3266 chr4 + 190214555 154069594 154069593 154069692 99 AGGTATTCATTTTTATTTCCATTTTACAAATGAGAAAACTGAGATTCAGAAAAGTTGAGTGGCCTTCCCTAGGTCCCTAGTGAATAAATAAGCAAGGCA chr4 - 94230402 10729188 10729187 10729281 83501122 83501121 83501215 94 AGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC-----TGGGTACAGAATCCAGGTA .....x.:.:.x.:.x:...........::..:..........::x..x.x.:...:...::::.x...x::...-----..::..x.x..x.x...:. 75M5D19M 62/94 66.0% 94/94230402 0.0% 5/94 5.3% 143340406 46874149 +3544 chr4 + 190214555 154095268 154095267 154095424 157 AATACTTATTTCTTATGTTTCTATGTCTTTGTCCATGAATCATAGGAGTCAGGTGAAATTATATATATATATATACACACACACACACACAGACACATACATATACATGTACATATACATATGTACGTGTGTGTATATACACATATACATATGTACG chr4 - 94230402 4417298 4417297 4417435 89812968 89812967 89813105 138 AATACTGATTCATTTTTCTTACATGCCT--GTTCATAAA-----------------AACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATG ......x...:x..x.x:..x:...:..--..:...:..-----------------..:.xx.x..x..x.:...:.:.............::x......::..:x:x..x:::.:.::...xx.x.::.x.:x............x:..x.:..:. 28M2D9M17D101M 89/138 64.5% 138/94230402 0.0% 19/138 13.8% 149677970 40536585 +3033 chr4 + 190214555 154095330 154095329 154095423 94 ATATATATATATACACACACACACACACAGACACATACATATACATGTACATATACATATGTACGTGTGTGTATATACACATATACATATGTAC chr4 - 94230402 4417343 4417342 4417436 89812967 89812966 89813060 94 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC ..x..x.:.....:.............x::...:.::...:x:x:.x.:..:..::..xx:x:.:.x.:x:....:...:..x..:x...:.:. 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 149677987 40536568 +3608 chr4 + 190214555 154095363 154095362 154095477 115 CATACATATACATGTACATATACATATGTACGTGTGTGTATATACACATATACATATGTACGTGTGTGTATATACACATATACATATGTACATATGCGTACATATATATGTACAT chr4 - 94230402 73121106 73121105 73121216 21109187 21109186 21109297 111 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCC----CACAGAGACACACATGTATAAGCAAAT ...:.....x...::.........:.x:x:.:..x..::...:::.:.x:....::x...::....x...:...:.x...::.x----:...x.x:.::....:....x.:.x.. 84M4D27M 70/111 63.1% 111/94230402 0.0% 4/111 3.6% 80974257 NA +3563 chr4 + 190214555 154095389 154095388 154095506 118 TGTACGTGTGTGTATATACACATATACATATGTACGTGTGTGTATATACACATATACATATGTACATATGCGTACATATATATGTACATATGTGTGTGTATATACACACACATACATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCC----------CACAGAGACACACATGTATA ...:.:..::.:.x:.............:.x:x:.:..x..::...:::.:.x:....::x...:..:..x.........x..:::.x----------:.:.x.x........::... 88M10D20M 69/108 63.9% 108/94230402 0.0% 10/108 9.3% 80974287 NA +3077 chr4 + 190214555 154095391 154095390 154095461 71 TACGTGTGTGTATATACACATATACATATGTACGTGTGTGTATATACACATATACATATGTACATATGCGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ......::..:.........:.:.x....::.::.x.x.....::.::::.x.:...:..x.:..:..:.. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 82465256 NA +3150 chr4 + 190214555 154095421 154095420 154095485 65 TACGTGTGTGTATATACAC------ATATACATATGTACATATGCGTACATATATATGTACATATGTGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ......::..:........------..........x.x::.....:.:::.x.::....:x.......... 19M6I46M 49/65 75.4% 71/94230402 0.0% 6/65 9.2% 82465286 NA +3210 chr4 + 190214555 154095440 154095439 154095508 69 ATATACATATGTACATATGCGTACATATATATGTACATATGTGTGTGTATATACACACACATACATATA chr4 - 94230402 37363045 37363044 37363112 56867291 56867290 56867358 68 ACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:....x.:.:..:.:....::.x......xx..::........:.....x:.......-...::.... 59M1D9M 50/68 73.5% 68/94230402 0.0% 1/68 1.5% 116732395 73482160 +3078 chr4 + 190214555 154095448 154095447 154095540 93 ATGTACATATGCGTACATATATATGTACATATGTGTGTGTATATACACACACATACATATATGTGTGTGTGTATATATATACACATATATAGA chr4 - 94230402 89016082 89016081 89016174 5214229 5214228 5214321 93 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGA ....:..:.:::x.:...::.:.:::..:.x..:.:::::.:..:..x.::......::..x:........:.x.:.:x.:.:..:.:.::.. 93M 52/93 55.9% 93/94230402 0.0% 0/93 0.0% 65079366 NA +3729 chr4 + 190214555 154095451 154095450 154095541 91 TACATATGCGTACATATATATGTACATATGTGTGTGTATATACACACACATACATA----------------------------TATGTGTGTGTGTATATATATACACATATATAGAC chr4 - 94230402 25393254 25393253 25393372 68837031 68837030 68837149 119 TAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataC ..x.x...:..:...:.:......::...x........:.:........::...::----------------------------.::...........x:...:..:::..:....x.. 56M28I35M 66/91 72.5% 119/94230402 0.0% 28/91 30.8% 128702197 61512358 +3488 chr4 + 190214555 154130573 154130572 154130631 59 CTCCCGGGTTCAAGTGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:...........x.:.x.xx.x........::.:...........:....x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 135933434 54281121 +3129 chr4 + 190214555 154157257 154157256 154157330 74 CTGCAACCTCTGCCTCCCAGATTCAAACAATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::.:.....:::x...x:xx.x........::.:.........:......x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 135960131 54254424 +3097 chr4 + 190214555 154165816 154165815 154165862 47 ATCTGCCAAAAAAAAAAAAAAAAAAGAAAAGAAATACACAAAAATTA chr4 - 94230402 11273425 11273424 11273471 82956932 82956931 82956978 47 ATTTACCAAAAAAAAAAAAAAACAGGAAAAAAAACCCACAACAATTA ..:.:.................x.:.....:...:x.....x..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 142892391 47322164 +3451 chr4 + 190214555 154177072 154177071 154177125 54 TCTTTTCTTTCTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTTAAGGTGAATAA chr4 - 94230402 66510364 66510363 66510417 27719986 27719985 27720039 54 TCTTTTATTTCTCCTTCTTTTTTCTTTTTCCTCTTTTCTTCTTAAAGTAGTTAA ......x.....::................:.:....:..:....:..::x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 87666708 NA +3000 chr4 + 190214555 154203452 154203451 154203510 59 CATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAA chr4 - 94230402 25798629 25798628 25798687 68431716 68431715 68431774 59 CATTTGGAAAAAAAAAAAAAAAAAGGAGGAGAATAATAAAAAGGAGGAGAAAGCATGAA ...:.x:.................::.::.:..x..x.....::.::......x.x... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 128404823 61809732 +3077 chr4 + 190214555 154203457 154203456 154203544 88 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAATATATTCATATAACCCTGATTTTGGTA chr4 - 94230402 28306136 28306135 28306223 65924180 65924179 65924267 88 CAAAAAATAAAAATAAAAAAAGACCAGCAAAACACACAGAAAAGATAAGGAGCAAATAAACTGTATCTAGACAATCAGATTGTTGGTA .......x.....x.......:.xx.:x....x.x.x.:......x.:::..x...x...x.:...::.x.:..:.xx:x.x...... 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 125897321 64317234 +3157 chr4 + 190214555 154258352 154258351 154258416 65 GCAGTAAAAGAAAGGCTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGATTGAGTTTTGCTCTTATT chr4 - 94230402 71968999 71968998 71969063 22261340 22261339 22261404 65 GCAGTCTTAGAAGAGCTTTTTTTTTTTTTTTTTTTCCTCTGGTTAAATTAAGGTTAGAGCTTACT .....xxx....::.....................::.:.x..x.:...:..x..x.xx....:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 82289353 NA +3005 chr4 + 190214555 154259458 154259457 154259541 84 TGACTTGTAATAATTCTCTCTCTCTCTCTCACACAGACACACCCACACACACACACACACACACACACACAAATATATTTCTGT chr4 - 94230402 49987055 49987054 49987138 44243265 44243264 44243348 84 TGGTTGGTAATACTCTCCTCTGTCACTGTGACACTAAATCATATATACACAGACACACACACACACGTGTGTGTGTGTGTCTGT ..::.x......x.:::....x..x..x.x....x:.xx..:x:.:.....x..............:::::x:.:.:.x..... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 104272403 85942152 +3369 chr4 + 190214555 154266305 154266304 154266358 54 TACTTGAGAGTTGCAGGGGTTTTTTTTTTGTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 13501370 13501369 13501423 80728980 80728979 80729033 54 TACTGAAATATTGTGGGGGTTTTTTTGTTGTTGTTGTTTTGTTTGTTTGTTTTT ....x:.:x:...::...........x........xx................. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 140764935 49449620 +3367 chr4 + 190214555 154266321 154266320 154266366 46 GGGTTTTTTTTTTGTTGTTTGTTTGTTTGTTTGTTTTTCCAAAACC chr4 - 94230402 19882711 19882710 19882756 74347647 74347646 74347692 46 GGTTTTTTTTTTTGTTGTTTGTTTGTTTCCTTGTTTTCCCAAGATC ..x.........................x:.......:....:.:. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 134383610 55830945 +3403 chr4 + 190214555 154366545 154366544 154366664 120 AATATGTGGGGGTTTGTATATGTATATGTGTGTATACACATATACACACACCCCCATACATACAC---ATTTTGTCATTTCAAAAGAGTGTGTATATATACACACACACACAGACACACACAC chr4 - 94230402 25393258 25393257 25393380 68837023 68837022 68837145 123 AATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATTTCCTGGCCTTGCgtgtgtgtgtaggtatgtatgtatgtatataCACATGAAC ...:....x:x..x.:.:.......x........:.....:.:..:.....x::.x...xx:x..---....:x.x:::.::x:x.x.......x:...::.:::.:::.:.x.....::x.. 65M3I55M 73/120 60.8% 123/94230402 0.0% 3/120 2.5% 128973287 61241268 +3139 chr4 + 190214555 154417184 154417183 154417223 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 135434869 54779686 +3102 chr4 + 190214555 154417186 154417185 154417221 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 72788122 NA +3353 chr4 + 190214555 154417186 154417185 154417225 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 135434871 54779684 +3316 chr4 + 190214555 154417188 154417187 154417223 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 72788124 NA +3567 chr4 + 190214555 154417188 154417187 154417227 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................::.. 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 135434873 54779682 +3102 chr4 + 190214555 154417190 154417189 154417225 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 72788126 NA +3353 chr4 + 190214555 154417190 154417189 154417229 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x...................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 135434875 54779680 +3139 chr4 + 190214555 154417192 154417191 154417231 40 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..............x.x...................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 135434877 54779678 +3185 chr4 + 190214555 154429202 154429201 154429259 58 CTATTGGGCCACTTTTGGTAGACAGAACTGGTGCTTCGGGATGAACACAT--GACAGCAA chr4 - 94230402 16697949 16697948 16698008 77532395 77532394 77532454 60 CCAGTGGGCCACTTTTGGTAAGCAGAAATGGTGCCGCAGGATGAACCAATTAGTCAGCAA .:.x................::.....x......:x.:........xx..--.x...... 50M2I8M 47/58 81.0% 60/94230402 0.0% 2/58 3.4% 137731253 52483302 +3063 chr4 + 190214555 154463099 154463098 154463192 94 ATATGTACATACTTATGTATAT--------ACATAAGTATATACATACTTATGTGTATATATATAAGTGTGTGTATATATATATACACACACACACACACAG chr4 - 94230402 8395756 8395755 8395857 85834546 85834545 85834647 102 ATTTGTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAG ..x.........xx.x.x.x..--------x...:x..:...:::.:.x..x:::.:...x..:.x:...:..:x..:..xx.................... 22M8I72M 64/94 68.1% 102/94230402 0.0% 8/94 8.5% 146067343 44147212 +3348 chr4 + 190214555 154481326 154481325 154481410 85 ATCATGGTTCACTGCAGCCTCGACCTCCCAGGCTCAACTAATCCTCCCATCTCAGCATCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197118 18197117 18197199 76033204 76033203 76033285 82 ATCATGTT---CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ......x.---..:.....:x:.x..:.::..:....x.:x.:.x.xx:x......x.::...........:......x...... 8M3D74M 58/82 70.7% 82/94230402 0.0% 3/82 3.7% 136284208 53930347 +3391 chr4 + 190214555 154488876 154488875 154489012 137 AAATATATATATGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATGTATTTATATGATATGATGTGAGACATTGTCAGTTGGAAGAGGTCTGATTTAGAATGG-GCAGTTCCTCCTGAA chr4 - 94230402 57691395 57691394 57691519 36538884 36538883 36539008 125 AAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAAGT-------------TTGGAAATGCATCAAGTTAGAATGGAATAGTTTCAATTGAA ..:.::...:...:x.......:..:..........:::.x.:.::x.:.x.:.:.x.xx.:x..:....x.x.:......x..-------------......:x.xx:::.x.........-::....:.xx:.... 84M13D25M1I15M 80/124 64.5% 125/94230402 0.0% 14/124 11.3% 96797481 93417074 +3038 chr4 + 190214555 154488904 154488903 154488954 51 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATGTATTTATATGATAT chr4 - 94230402 7002321 7002320 7002371 87228032 87228031 87228082 51 GTGTGTGTGGCTGTGTGTGTGTTTTTGTGTGTACAAGCATGCATATGATGT .........xx...........x.x.....:....x.:..x:.......:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 147486583 42727972 +3057 chr4 + 190214555 154493286 154493285 154493328 43 TTTTCTGTTTTTGCTATTGTTGTTGTTGTTGCTGTTTTGTTTT chr4 - 94230402 59743384 59743383 59743426 34486977 34486976 34487019 43 TTTTTTTTTTTTGCTGTTGTTGTTGCTGCTGTTGCTTTGTTTT ....:.x........:.........:..:..:..:........ 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 94749902 NA +3102 chr4 + 190214555 154532179 154532178 154532245 67 CTGAAGCCTCGACCTCCCAGGCTCCAGTGATCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:x....:x:.x..:.::..:..x....x.:.x.xx:x........:............:...... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 136335053 53879502 +3689 chr4 + 190214555 154533367 154533366 154533457 91 TCTCAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACATATGCTTTTTTCTATGTATAGAAA chr4 - 94230402 60979336 60979335 60979426 33250977 33250976 33251067 91 TCTTGTAAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAACCCTACTGTGTAAAGTAA ...::x.......x..x.....x...x..x.xx.x........:.:...................x.x.x:xx:::.x..:....x..x.. 91M 65/91 71.4% 91/94230402 0.0% 0/91 0.0% 93554031 NA +3202 chr4 + 190214555 154533371 154533370 154533431 61 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::x.................:.:.:....::..x.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 83825792 NA +3122 chr4 + 190214555 154533375 154533374 154533430 56 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACAC chr4 - 94230402 70707579 70707578 70707634 23522769 23522768 23522824 56 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ..:....x.:.....x.::..x.x:x.................:........::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 83825796 NA +3039 chr4 + 190214555 154533377 154533376 154533432 56 AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACAC chr4 - 94230402 70707579 70707578 70707634 23522769 23522768 23522824 56 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ..:....x.:.....x.::x.x.x:x..........................::.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 83825798 NA +3017 chr4 + 190214555 154533378 154533377 154533416 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 85095639 NA +3493 chr4 + 190214555 154533382 154533381 154533484 103 AAAAAAAAAAAAAATATATATATATATATATATATATACACACACACACACATATGC-TTTTTTCTATGTATAGAAACCCTTCTTTGGCATCTATGAAGATGCT chr4 - 94230402 64433200 64433199 64433299 29797104 29797103 29797203 100 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAA----TTTCTGACGTAGTTGAAATTGTT .:.....:x......x.x.x.:.:.:.........x......:......:....:.:-.x.x.x.:....::.....----.:.:..:.:.xxx....:x..:. 57M1I19M4D23M 69/99 69.7% 100/94230402 0.0% 5/99 5.1% 90100182 NA +3044 chr4 + 190214555 154533399 154533398 154533507 109 ATATATATATATATATATATACACACACACACACATATGCTTTTTTCTATGTATAGAAACCCTTCTTTGG--CATCTATGAAGATGCTCATATTTTCTACCTTATCTAAAT chr4 - 94230402 8681930 8681929 8682040 85548363 85548362 85548473 111 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGAAGAGCTTTTGATTGTCCAGATGTGACAATGGTCTGGTTTGTCTCTTACTTTAAAT .....x..........:...:........:...:...xx::.....:.x.x.x.::.:.x.:..:xx.x.--..xx.:...x:...x..xx:...x::x.:.xx.:..... 70M2I39M 70/109 64.2% 111/94230402 0.0% 2/109 1.8% 145851469 44363086 +3090 chr4 + 190214555 154553050 154553049 154553108 59 GTGTATGTGTGTGTGTGAGAGAGAGAGAGAGAGTCCTCGGGTCTTACTTATCACAATTT chr4 - 94230402 18982316 18982315 18982374 75248029 75248028 75248087 59 GTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTATTTTGTGATAATTT ....:............................xxxxx..:.:.xx:..:.x.:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 135570734 54643821 +3913 chr4 + 190214555 154556997 154556996 154557078 82 CTTTTTGTACTTCAATTCTCCCATCTGTAAAATGGGAATAATAGTACTACTCTACCTCATAGAGTTATTGTAAGAATTAAGT chr4 - 94230402 66214161 66214160 66214242 28016161 28016160 28016242 82 CTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAGGTGCAGGAAGGTTTAAAT ..:.:....::x.:...:::.......................x.:..xx:...:...x.....x.::x.x...:x....:. 82M 58/82 70.7% 82/94230402 0.0% 0/82 0.0% 88342836 NA +3781 chr4 + 190214555 154558447 154558446 154558548 102 TACAAAAAAATACATATATACATACATATA-TACATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGATGGAGAGAGACAGAGAGAGACAGACA chr4 - 94230402 89611966 89611965 89612067 4618336 4618335 4618437 102 TACAACATATAATATATA-ATATATCTATACTATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAACAGCCA .....x.x.xx.:.....-.:...:x....-..:...x.x......::...x::..............::........:::.x:x:.x.:...:.:....x.. 18M1D11M1I72M 71/101 70.3% 102/94230402 0.0% 2/101 2.0% 64946481 NA +3018 chr4 + 190214555 154558456 154558455 154558520 65 ATACATATATACATACATATATACATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398805 33398804 33398869 60831534 60831533 60831598 65 ATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGA ...x..:...x:.x.x:.:.:::::.:.:....:.:.......:.x.............x..... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 121159651 69054904 +3070 chr4 + 190214555 154558458 154558457 154558523 66 ACATATATACATACATATATACATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAT chr4 - 94230402 33398809 33398808 33398874 60831529 60831528 60831594 66 ATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGAT .::...x..x.x:::.:::.:::.:....:.:.......:.:.............x.....x.... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 121159649 69054906 +3028 chr4 + 190214555 154558485 154558484 154558524 40 TATATATATATATATAGAGAGAGAGAGAGAGAGAGAGATG chr4 - 94230402 67274518 67274517 67274557 26955846 26955845 26955885 40 TAAATATGTATATATAGAGAGAAGGAGAGAGAGAGAAATG ..x....:..............::............:... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 87283967 NA +3162 chr4 + 190214555 154574262 154574261 154574323 62 TATATATATACATATATATATATACACATATATAATTATATATATGTATATATAATTATACA chr4 - 94230402 37363040 37363039 37363101 56867302 56867301 56867363 62 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACA .:.:..:....x.:......:..:....x.....x.x:.:.......:...:..x.:.:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 117211222 73003333 +4491 chr4 + 190214555 154584140 154584139 154584338 199 GGCCTAATTTTCATGCGAACAGCCCTGAGGGAATAATCTGCCCCTCTAAAGGAAACCCAGACCACTCCATTCTCAATCTCATAAGGACTGTTATTCCTTGGGTCATAGGAGCCCCCAGGGTAGTAGATTCCATTGAGATTGGCTGCTTGGCAGTTATTATACCACCAGCCTCCCCCATAGACTTCTG--CACAGTTCTCTT chr4 - 94230402 72832733 72832732 72832930 21397473 21397472 21397670 198 GGCTTGATTTTCATGCTCATCTTCTTCATTGAATACCATGACCCCTTCCAGTTCATCCATACAATACCATCATCTGTACCAT--GTTTTGCCATATCCCAGCT-GTAAGTCCCTCCCCAGTAGTATCTGCCATTAGGGTTGGCTGCATGGCAGCGATTGTACCACCATCCACCACCATCTTCTTTGGAACACTGTTTTCTT ...:.:..........xx.:xx:.:.x.xx.....x:x..x...::.xx..xxx.:...x..x.:x....:x..x:.x:...--.xx:..::..x:.:::.x.-:..:.xx..:..xx:......xx.x.....::.:........x......:x...:........x..x..x....xxx...:x.--...x...:.... 82M2D19M1D83M2I12M 123/196 62.8% 198/94230402 0.0% 5/196 2.6% 81751407 NA +5193 chr4 + 190214555 154606739 154606738 154606837 99 ACACTTGTTCATCCACCAACCAGATCCATCCTGTTCAGCACAGTTGCCTTCAAACTTATCATTGTCATTGTCCCAGGTACTGAACTGCATGCCATTATG chr4 - 94230402 29520777 29520776 29520875 64709528 64709527 64709626 99 ATACCTGTTAAACCACCAGCCAGCCTTTTCCTCTTCAGCACAGTTGCCTTCATAGTTGTCATTGTCCCTGTCTCTAGTACTGAATTTCATTCCGCAATG .:..:....x.x......:....x:::x....x...................x.x..:........x:....:.x:........:.x...x..::x... 99M 74/99 74.7% 99/94230402 0.0% 0/99 0.0% 125085962 65128593 +3097 chr4 + 190214555 154622740 154622739 154622793 54 TCTCAAAAAAAAAAAAAAAAAAGACAAGAAAAGAACTGTATTTTAAGGCACTTT chr4 - 94230402 65833265 65833264 65833318 28397085 28397084 28397138 54 TCCTAAAAAAAAAAAAAAAAAAGACACCATGAAAACTGTATTTGTAGACAGTTT ..::......................xx.x:.:..........xx..:..x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 88789475 NA +3123 chr4 + 190214555 154623304 154623303 154623366 63 AACTCCTGGGCTCTAGTGATTGTTCAATCTCAGCCTTTTGAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197137 18197136 18197199 76033204 76033203 76033266 63 AGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:..:.....:..x....x..xx:x::x..........::.........:......x.::... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 136426167 53788388 +3633 chr4 + 190214555 154634552 154634551 154634640 89 TACCACACCTGGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681900 8681899 8681983 85548420 85548419 85548503 84 TACAACAACTAAAATGGATATCCATGTCTG-----ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x...x..::x..:x....x:..:.x.:-----.....x..........:...::.:.:.:...:.....x:.:............. 30M5D54M 61/84 72.6% 84/94230402 0.0% 5/84 6.0% 145952652 44261903 +3539 chr4 + 190214555 154634563 154634562 154634655 93 GCATATATATATATATA--------TATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681903 56681902 56682003 37548400 37548399 37548500 101 GTAAATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .:.x..x........:.--------:.:.....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x....x......... 17M8I76M 68/93 73.1% 101/94230402 0.0% 8/93 8.6% 97952660 92261895 +3018 chr4 + 190214555 154634569 154634568 154634634 66 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 35241745 35241744 35241810 58988593 58988592 58988658 66 ATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTT ...xx....x..::x...xx.x.:..:.x......:..:.:.:............x...:...... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 119392824 70821731 +3014 chr4 + 190214555 154634585 154634584 154634643 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 111876730 78337825 +3040 chr4 + 190214555 154634585 154634584 154634636 52 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681932 8681931 8681983 85548420 85548419 85548471 52 ATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..........:...::.:.:.:...:.....xx.x............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 145952653 44261902 +3123 chr4 + 190214555 154634587 154634586 154634638 52 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681932 8681931 8681983 85548420 85548419 85548471 52 ATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ...x..........:...::.:.:.:...:.....xx.:............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 145952655 44261900 +3068 chr4 + 190214555 154634588 154634587 154634643 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 61899240 NA +3084 chr4 + 190214555 154634590 154634589 154634665 76 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGAGACA chr4 - 94230402 4865454 4865453 4865528 89364875 89364874 89364949 75 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTACA-AAAGACA ..x.x..............x.:x.x...x.x.xx:.........x..x....x..........:.x:.-.:..... 68M1D7M 57/75 76.0% 75/94230402 0.0% 1/75 1.3% 149769136 40445419 +3282 chr4 + 190214555 154634590 154634589 154634645 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 61899242 NA +3469 chr4 + 190214555 154634592 154634591 154634661 70 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGA chr4 - 94230402 4865454 4865453 4865523 89364880 89364879 89364949 70 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTACAAA ..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:..:.:. 70M 54/70 77.1% 70/94230402 0.0% 0/70 0.0% 149769138 40445417 +3496 chr4 + 190214555 154634592 154634591 154634647 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 61899244 NA +3078 chr4 + 190214555 154634594 154634593 154634663 70 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGAGA chr4 - 94230402 4865454 4865453 4865523 89364880 89364879 89364949 70 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCTACAAA ..x.x..............x.:x.x...x.xxx.:.........x..x....x..........x..x.:. 70M 53/70 75.7% 70/94230402 0.0% 0/70 0.0% 149769140 40445415 +3282 chr4 + 190214555 154634594 154634593 154634649 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 61899246 NA +3068 chr4 + 190214555 154634596 154634595 154634651 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 61899248 NA +3121 chr4 + 190214555 154634596 154634595 154634649 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 150434322 39780233 +3003 chr4 + 190214555 154634598 154634597 154634658 61 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT chr4 - 94230402 4200274 4200273 4200334 90030069 90030068 90030129 61 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGTTAT ..x............:.:.:.......x......::...:xxx.......x...:xx.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 150434324 39780231 +8231 chr4 + 190214555 154657869 154657868 154658084 216 ACTGACCTGGAATTTCAGTAGGAGACACTTGGGAAGAGTCACAAGTTACATCTG-------------CTGAGGATCACCAACTTCATACGATAGCTGTTCAGCCACTGTACCAAAGAAGACAATCCCCCCCAAGCAGGGGGGCTTGGGTATGAGGAACTGTCCATCGGAA-AGCTTTCCAGTATGGGAAATCATATATTGTGCATAGGTGAAAAACAGGGAAAACTATGG chr4 - 94230402 72786898 72786897 72787121 21443282 21443281 21443505 224 ACTAACCTGGAATTTCAGTGATGGAAACTTCAGAAAAGTCACACGTGACATCTGGTAAAAGGTAGCGCTGAGGATTGCCCAATTCATACACCAACTGTTCAGCCACAGTGCCAAAGGAGATCAGACCCCCTGTGTCTGGTGGTTTGGAAATAATAAGGTCTCCTTCAGAAGAGCATTCTACAATGGGAAAGCCTATGTTATGCCTAG------AATAATGAAAACATTGG ...:...............::x:..x....x:...:.......x..x.......-------------........::..x.x.......:x:.:............x..:......:...:x.xx.....::x.:xx..x..:....:x..:.x:.:x.x...x..:...-...x...:.xx........x.x...:..:...x...------..:.:x......xx... 54M13I103M1I36M6D17M 152/210 72.4% 224/94230402 0.0% 20/210 9.5% 81870971 NA +3251 chr4 + 190214555 154679289 154679288 154679349 61 CTCCTGGATTCAAGCGATTCTCTTGCTTCAGCCTCCCCAGGAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:....:......:.x...x.xx.x:.......::.x..x......:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 136482150 53732405 +3328 chr4 + 190214555 154730937 154730936 154731016 80 CCATATATGTATATACACATATATATATACACATATATATACATATATACATATATATACACACACACACATATATATAT chr4 - 94230402 8395786 8395785 8395865 85834538 85834537 85834617 80 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ....:.:.....:.:::....x.:..:..:x:.:....:..:::x..:.:xx...:.:.............x.:.:.x.. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 146335151 43879404 +3069 chr4 + 190214555 154730941 154730940 154731015 75 ATATGTATATACACATATATATATACACATATATATACATATATACATATATATACACACACACACATATATATA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:...:...::::::...x.:..::.:x..:....::..::x.....xx...:.............:.x.:.:. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 146335153 43879402 +3505 chr4 + 190214555 154730942 154730941 154731015 74 TATGTATATACACATATATATATACACATATATATACATATATACATATATATACACACACACACATATATATA chr4 - 94230402 37363040 37363039 37363112 56867291 56867290 56867363 73 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-ATATGTATA .:....:....x::......:..:....x......xx:.:....::.:...:..:x........-....:.... 64M1D9M 54/73 74.0% 73/94230402 0.0% 1/73 1.4% 117367902 72846653 +3159 chr4 + 190214555 154736758 154736757 154736800 43 CAGAGTGAGACTCCATCAAAAAAAAAAAAGAAAGAAAGAAAAG chr4 - 94230402 32280597 32280596 32280639 61949764 61949763 61949806 43 CAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAG ..:...:.:.x....::.......................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 122456161 67758394 +3054 chr4 + 190214555 154744975 154744974 154745036 62 TACCACTTCCATACCATCCTTTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 73032469 73032468 73032530 21197873 21197872 21197934 62 TACCCCTTTTATAAACTCCTGTTGCTTTTTCCTTGCTGTTTTTCTTTTCTTTGTTTTGTTTT ....x...::...xxx....x..x..........x:.x.....:....:...x....x.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 81712506 NA +3048 chr4 + 190214555 154765412 154765411 154765467 56 TATCTATATATATATATATACACACACACGTATATACCTATGGACAAATATATATG chr4 - 94230402 72800653 72800652 72800708 21429695 21429694 21429750 56 TGTTTACATATATATATATACACACACATATATAAACCAAAAGAAACGTTTATATG .:.:..:.....................::....x...x.x:..x.x:.x...... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 81964759 NA +3017 chr4 + 190214555 154899849 154899848 154899920 72 TCCAGCCTGGGTGACAGAGCAAAACTCTGTATCAAAAAAAAAAAAAAAAAGGATACTTATTCTATAATATAT chr4 - 94230402 24963228 24963227 24963299 69267104 69267103 69267175 72 TTCACCCTGAATAACATATTCAGCCTGTGTAACTAAGAAAAAAAAATATTGAATACATGTTCTATAATATAT .:..x....::.:...x.x:x.:x..x....x.x..:.........x.xx.:....x.:............. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 129936621 60277934 +3064 chr4 + 190214555 154925150 154925149 154925194 45 GGTCTTTTTTGTTGATGTTGTTGTTGTTTTCTTTTTGTTTTTCTT chr4 - 94230402 66916764 66916763 66916808 27313595 27313594 27313639 45 GGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCT ...:..........x..........x.:.x:............:. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 88008386 NA +3534 chr4 + 190214555 154952944 154952943 154953060 117 GGAAACAGGAAAAAAAAAAAGAAGGTTTTTTTTTTTTTTTTTTTTTTTCAAAGGAGTCCCAGT---GATGCAGGATGCAGTCAAGAGAAGTACAGACTGAAGATGGTTGGTTTCTCATCT chr4 - 94230402 65766199 65766198 65766317 28464086 28464085 28464204 119 GGAAACATGAAAAAAAAAAGGGAAAATTTGTGCTTTTTTTTTTTTTTTTTAAGAGACTCTATTTTGAGTGTAAGATGTAACCATGAACAGCAAATAAGTGAAATAG-AGTTTTCTGATCT .......x...........:.:.::x...x.x:...............:x...:::::.:.x.---::..:.:....:.::..x..:x..:.x.x.xxx:.:..:.-x.x.....x.... 63M3I40M1D13M 76/116 65.5% 119/94230402 0.0% 4/116 3.4% 89186745 NA +3116 chr4 + 190214555 154997717 154997716 154997788 72 TCTTTTTAACCTCTGGCACTTAGTTTTTTTTTCTTTCTTTTTCTTTTTCTTTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 4658060 4658059 4658131 89572272 89572271 89572343 72 TCCCTCCAACTTCAGATTTTTAATCATTTTTATTGTGCCTTTACTGTTCTCTCTCTCTCTTTTTTTTTTTTT ..::.::...:..x.::x:...:.:x.....x:.x.x::...x:.x....:..................... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 150339657 39874898 +3390 chr4 + 190214555 155031612 155031611 155031758 147 ACAGAGTTTTGGGGGAAAAGAATGATGGCTTTCTAATGTAATGGAGAAA--TCCATTTGAGAAATAGCCAG-----TAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 34847658 34847657 34847807 59382596 59382595 59382745 150 ATGGAATTTTATAAATAACAGATGTGAGCTTTTT----TTATGAAAAATGTTTTGTTTTTAAAATGTTCAGAGTTTTAAAGGAAAAAAAAAAAAGAAAAAAGAACAGAAATTTAATTCTGTTTGCTTATTTTGTTTTTCCTTTTTTCTTTTGTT .::..:....:x:::x..x::...xx:.....:.----.x...:.:..x--.:::...xx:....:x:...-----....::............:......:..x.x.x..x..xx.x.:.x.::x...x..x.....::......:....x.. 34M4D11M2I20M5I78M 92/143 64.3% 150/94230402 0.0% 11/143 7.7% 120183954 70030601 +3260 chr4 + 190214555 155031665 155031664 155031763 99 TTTGAGAAAT--AGCCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTGAGAC chr4 - 94230402 84727803 84727802 84727903 9502500 9502499 9502600 101 TTTAAAACATCAAGTCAGGTGAAAAGTGAAAACTAACAATGAAAAAGGTGGATTTTCATATATATATATCAATTTTTTTCTTCCGTTCTTTTCCTAGAGGC ...:.:.x..--..:...xx:....:x:....xx..x..x:.....::.:x..x.x:............xx........:..::x..:....::.x...:. 10M2I89M 66/99 66.7% 101/94230402 0.0% 2/99 2.0% 70303862 NA +3114 chr4 + 190214555 155031693 155031692 155031775 83 AAAAAAAAAAAAAAAAAATATATATATATATATATATATAT----------ATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTC chr4 - 94230402 69437739 69437738 69437829 24792574 24792573 24792664 91 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTGTTCTTTCTCACACTGTTTTCAAA--AAGTTCTGCTC .........x........:x...................x.----------...:.x..:...:.:x:x:.x....x.:.--:...:::.... 41M10I29M2D11M 61/81 75.3% 91/94230402 0.0% 12/81 14.8% 85593954 NA +3111 chr4 + 190214555 155031702 155031701 155031756 55 AAAAAAAAATATATATATATATATATATATATATTTTTTTTTTT----TTTTTTTTTTT chr4 - 94230402 4200269 4200268 4200327 90030076 90030075 90030134 59 AAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ....xx.:............:.:.:..............::...----.......x... 44M4I11M 46/55 83.6% 59/94230402 0.0% 4/55 7.3% 150831433 39383122 +3217 chr4 + 190214555 155031711 155031710 155031758 48 TATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735356 92735355 92735403 1495000 1494999 1495047 48 TATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .....:...:..:.:...............:.x.........:.x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 62296355 NA +3129 chr4 + 190214555 155104308 155104307 155104375 68 CTTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGAGATAGACTCTCACTCTGTC chr4 - 94230402 50770966 50770965 50771033 43459370 43459369 43459437 68 CTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATTTGTC ...:.....:........xx...x.....x...x.............:xx...xx::..:xx.:.... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 104333342 85881213 +3149 chr4 + 190214555 155104308 155104307 155104348 41 CTTTTCTCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT chr4 - 94230402 81156781 81156780 81156821 13073582 13073581 13073622 41 CTCTTCTTTTTCTCTCTCTCTCTCAGTTTTTTTTTTTTTTT ..:....:................xx............... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 73947527 NA +3095 chr4 + 190214555 155104314 155104313 155104349 36 TCTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:.:................................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 136174402 54040153 +3217 chr4 + 190214555 155104316 155104315 155104351 36 TTTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................:.................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 136174404 54040151 +3042 chr4 + 190214555 155115349 155115348 155115431 83 AAGAGAGAAATAAAACAACACACAAACAAAACAAAACAAAACAAAACAAAAAAAGAGGGAAGAACAAGCCTGGAAAACTGAAA chr4 - 94230402 16367971 16367970 16368053 77862350 77862349 77862432 83 AAGAAAAAAACCTAACAACAAACAAACAAAACAAAACACAAAAACTTCTAGAAATTTTGGAGAAAAAGATTGAACTACTGAGA ....:.:...:xx.......x.................x..x..xx:xx.:...xxxx.:....x...x:..:.xx.....:. 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 138747378 51467177 +3013 chr4 + 190214555 155120317 155120316 155120369 53 GAGAGAGACAGATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 66896861 66896860 66896913 27333490 27333489 27333542 53 GAGAGCAATGAAAGTATATGTATAGAGATACACAGAGAGAGAGAGAGAGAGGG .....x:.:::.x:.....:....x.x...:.:..................:. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 88223456 NA +3268 chr4 + 190214555 155120321 155120320 155120376 56 GAGACAGATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 12340912 12340911 12340967 81889436 81889435 81889491 56 GAGACTAATGTACATACATAAAAATATATGGAGAGAAAGAGAGCAAAAGAGAGGGA .....x:..:..:...:...x.x......:......:......x:.:......:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 142779409 47435146 +3216 chr4 + 190214555 155120339 155120338 155120407 69 TATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAAAGCCCACTGTGCTAGAGGGAAA chr4 - 94230402 67274518 67274517 67274586 26955817 26955816 26955885 69 TAAATATGTATATATAGAGAGAAGGAGAGAGAGAGAAATGTGTAGGAAACTCAGTGCTCTAGAGTAAGA ..x....:....x.x.......::............:.x:x.x..:..:.:..x..:x......x:.:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 87845821 NA +3441 chr4 + 190214555 155173056 155173055 155173132 77 ATATATATGTATATATATGTG---------TGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGTGTGTATATGTG chr4 - 94230402 70982597 70982596 70982682 23247721 23247720 23247806 86 ATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ........:.x...x:....:---------:x.......:.:..........:....:.x:...x.........::.::.:.::.. 21M9I56M 56/77 72.7% 86/94230402 0.0% 9/77 11.7% 84190459 NA +3411 chr4 + 190214555 155173066 155173065 155173121 56 ATATATATGTGTGTGTGTGTATATATGTGTGTATATATATGTATATATGTGTGTGT chr4 - 94230402 35554961 35554960 35555016 58675387 58675386 58675442 56 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGT ......x..x.........:.:.....x.............:...:.x:x:..... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 119618105 70596450 +3161 chr4 + 190214555 155197419 155197418 155197520 102 TCTCCCACTTCTTCCTTCCTTCCTTCTTTCCTGCCTGCTTTCCTTCCTTCTTACTTTCTTCCCTTCTTTCCTGACTAGGAGGAGCTCTCTGTCATCCTTGCT chr4 - 94230402 91731731 91731730 91731817 2498586 2498585 2498672 87 TCTCCCAGCTCTGGGTTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTT---------------GGAGATCTCTTCCATTTCTCCT .......x:...xxx..:..:x:.......:xx::............::...x......:..:..---------------....x.....x:...:::.x.. 65M15D22M 61/87 70.1% 87/94230402 0.0% 15/87 17.2% 63465688 NA +3271 chr4 + 190214555 155213809 155213808 155213870 62 TTTCTTTGCTTCACCTTTGTGTTTTCCTCGTTCCATTGGTTTTTGTTGTTGTTGTTTTGTTT chr4 - 94230402 39227032 39227031 39227093 55003310 55003309 55003371 62 TTCCTTGACTACTCTTTTATGTTTTTTCCCTCTCATTGATTTTTGTTGTTGTTGTTGTTTTT ..:...x:..x.x.:...:......:::.x.::.....:.................x.x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 115986777 74227778 +3184 chr4 + 190214555 155226829 155226828 155226908 80 CTCAAAAAAAAAAAAAAAAAAAGATTGTAGGAAAAAATACAGTTATCTGGTGT----CACTAACAATATTAGTCATTTTGGTGT chr4 - 94230402 63505118 63505117 63505193 30725210 30725209 30725285 76 CTCAAAAAAAAAAAAAAAAGAAGTTTGGAAAAAAAATTACATTGATCTGACATATTGCAATGACTAT--------TTTTGGTGT ...................:...x...x.::.....x....x.x.....:::.----..x.:..x..--------......... 53M4I10M8D9M 58/72 80.6% 76/94230402 0.0% 12/72 16.7% 91721711 NA +3119 chr4 + 190214555 155262487 155262486 155262547 61 CTTTCTTCATTCATTCATGTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTGGTCT chr4 - 94230402 37306404 37306403 37306464 56923939 56923938 56923999 61 CTTACTTTATTCACTTCTGTTTTTAACTTTATTTCTTTTTCTTCTTTTTTTTCTCTTGTTT ...x...:.....:.:x.......xx:..:x.........:..:........:.:.x..:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 117956083 72258472 +3494 chr4 + 190214555 155310222 155310221 155310359 138 TCACCA--GATATGGGCTCTCAACCCTGAGCTTCTCAGTCTCCATAACTGATAA------AAATAAATTGTTTCATT---CATATATATATATATATATATATATATATATTTCTTCATATATATATATATACACACACACTATATATA chr4 - 94230402 37362970 37362969 37363112 56867291 56867290 56867433 143 TCACCATAGATATA---TCTGAGTCCTCTGTATCTCAGTT---ATTATTTATCATGTTCTGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA ......--.....:---...x.::...xx.:x.......:---..x.:.x..x.------:..x......:xx....---:.:...:x.:......:..::.:.x.......xx.x:....:.:...:...x........x...:.... 6M2I6M3D23M3D11M6I17M3I69M 94/132 71.2% 143/94230402 0.0% 17/132 12.9% 117947252 72267303 +3094 chr4 + 190214555 155310293 155310292 155310366 74 TATATATATATATATATATATATATATATTTCTTCATATATATATATATACACACACACTATATATATGAAGCA chr4 - 94230402 37363044 37363043 37363117 56867286 56867285 56867359 74 TACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATA ..:...:x.:......:..::.:.x....x.:xx::.....:.:...:..:x.......x....:...:..::. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 117947249 72267306 +3140 chr4 + 190214555 155310368 155310367 155310426 59 TTTATATATATATACACACACGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATTGCCCA chr4 - 94230402 48089495 48089494 48089553 46140850 46140849 46140908 59 TCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACA .:.:..x:.x.:..:.:............:....x.x........:....x...:.x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 107220873 82993682 +3186 chr4 + 190214555 155328439 155328438 155328502 64 TATATATATATGTGTATATATATATATGTGTGTGTATATATATATGTATATATATACACACATA chr4 - 94230402 71926809 71926808 71926872 22303531 22303530 22303594 64 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATA .........x....::..:...:.x....x...:....x...x..xx..:....x..::..... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 83401630 NA +3346 chr4 + 190214555 155328448 155328447 155328511 64 ATGTGTATATATATATATGTGTGTGTATATATATATGTATATATATACACACATACATACATAT chr4 - 94230402 24136193 24136192 24136256 70094147 70094146 70094210 64 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATAT .....:........x....x:xx...x......:..:..:...:.x...x...x...:...... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 131192255 59022300 +3544 chr4 + 190214555 155352626 155352625 155352730 105 TTTATCTTTATCTTTTTTCTCAGCTCTTTTCAGTTCTTCCTTTCTTTTCTCATTTATTTTTTCTTTTTCCTTTTG-----CTTGAAAAAAGCTTCCTTTTTTTCATTCCT chr4 - 94230402 65640476 65640475 65640585 28589818 28589817 28589927 110 TTTTTCCATCTCTTTCTATGGAGCTCTATCTCCTTCTTTTTTTTTCTACGCCTTTATTTTTTCTTTTGCCTTCTGTGTGTCGTACACAAAGCTACttttttttttttttt ...x..:x.x.....:.x:xx......x.::xx.....::...:.:.x.x.x...............x....:..-----.x.:x.x......x.:.......:x..::. 75M5I30M 72/105 68.6% 110/94230402 0.0% 5/105 4.8% 89712150 NA +3048 chr4 + 190214555 155369323 155369322 155369371 49 CCATCTAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAA chr4 - 94230402 32680547 32680546 32680595 61549808 61549807 61549856 49 CTAACAAAAAGCCAAAAAAAAACCCAACAACAACAACAACAAAACAAAA .:.x.x....:xx...........x...................x.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 122688776 67525779 +3291 chr4 + 190214555 155369324 155369323 155369390 67 CATCTAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAAAC------AAAGTAAAGAAACAGTT chr4 - 94230402 87749152 87749151 87749224 6481179 6481178 6481251 73 CAACTACGAAAAAAAAGTCAACCAACCAACAACAACAACAAGAAAAAAATCCATCAGAAAAAAAAAAAAAGTT ..x...x:........:xx......x...............:.......:------:..:x...:...x.... 50M6I17M 53/67 79.1% 73/94230402 0.0% 6/67 9.0% 67620172 NA +3006 chr4 + 190214555 155369326 155369325 155369379 54 TCTAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAAACAAAGTA chr4 - 94230402 89474245 89474244 89474298 4756105 4756104 4756158 54 TCTGGAGAGAAAACAACAAACAAACAACAACAACAACAAAAAAACAGTTATGTA ...::.:.:....x..x..x........................x.::x.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 65895081 NA +3771 chr4 + 190214555 155369328 155369327 155369370 43 TAAAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA chr4 - 94230402 4027219 4027218 4027261 90203142 90203141 90203184 43 TACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA ..x........................................ 43M 42/43 97.7% 43/94230402 0.0% 0/43 0.0% 151342109 38872446 +3285 chr4 + 190214555 155369330 155369329 155369423 94 AAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAAACAAAGTAAAGAAACAGTTGTCATCCTGAA-AGTAACCAGTCACAAGAAGTTA chr4 - 94230402 18021890 18021889 18021983 76208420 76208419 76208513 94 AGAAAAAGGAAACAAACAAACAACAACAACAAC-AAAAAAAAACAGGGAAAGAAAATCCTCATCTCTTTAAATAATGACCATCTTTAACTAGTTA .:.....::...x..x.................-...........::.x..::...:xx.::..x:::.:..-.:.:....x::x:..xx..... 33M1D38M1I22M 64/93 68.8% 94/94230402 0.0% 2/93 2.2% 137347440 52867115 +3135 chr4 + 190214555 155389458 155389457 155389492 35 AAAAAACAGAAACAAACAAACAAACAAAACCACAA chr4 - 94230402 71715613 71715612 71715647 22514756 22514755 22514790 35 AAAAAACAAAAACAAACAAACAAACAAAACCACAA ........:.......................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 83673845 NA +3700 chr4 + 190214555 155392092 155392091 155392263 172 GAGAGAGAGGGAGAGGGGGAGAGGGAAAGAGAGAGAGAGAGAGAGACAGA-GAGACAGAGAGAGAGAGAGAGAGGGAGAGACAGAGAGAGAAAGAGGAAGGAGGGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAAGAAAGAGAAGAAAGAAGAAAGAAAGA chr4 - 94230402 63710290 63710289 63710454 30519949 30519948 30520113 165 GGGAAGGAGGCAGAGGGAGAGACCTGAAGGAAGAG-------GAGGCAGATGGGGCTAAGGGAGAT-GAGAAAACAGGACACAGTGAGGTCACTGGGACAAGCAGTGGGGTCACAGTTGGGAGGAGAGCTGGGCAGGAGGCAAGGAAGAGCAAGCAGAGGGGAGCGAGGGAGA .:..::....x......:....xxx:...::....-------...:....-.:.:.x:..:....x-....:.:x::..x....x...:xx.xx:...x:::x:.x:..:xx:x..xx......:::.xx...x......x........:x:..x...::.:..x:..::... 35M7D8M1I15M1D106M 100/164 61.0% 165/94230402 0.0% 9/164 5.5% 91681802 NA +3353 chr4 + 190214555 155441331 155441330 155441410 80 AAAAGAAAGGAGAAAGAAAAGAAAGAAGCAAGGAAAGAGAAAGAAAGCAAGAAAAAGAAAGGAAGAAGGAAGGAAAATAA chr4 - 94230402 29503818 29503817 29503897 64726506 64726505 64726585 80 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGA ....::.:...:::.:..:.........::..:..:..:...:...x.xx:x.....:...::.:.x....x:x....:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 125937513 64277042 +3115 chr4 + 190214555 155474597 155474596 155474663 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGTATATAAGATGTATATTGTCGAGTTTT chr4 - 94230402 63106825 63106824 63106891 31123512 31123511 31123578 67 AAAATGTAGGGAAAAAGCAAAAAAAAAAAAAGAAAGAGGTATTATGAGATGAGAATTGTTAAGTTTT ....x:x.:::.....:x.............:.....:.xxx...:.....x:x.....::...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 92367772 NA +3013 chr4 + 190214555 155500112 155500111 155500171 60 GTAAAAACATGAATATTGTTTCTTTTTTCTTTTCTTTTTTTTCTTTCCTTCCTTTTCCTT chr4 - 94230402 67430002 67430001 67430061 26800342 26800341 26800401 60 GTAAGATCAGAAAGCTCGCTTCCTTTTTTTTTTTTTTTTCCCCTCTCCTTCCTTCTCTCT ....:.x..x:..xx.:.:...:.....:....:.....:::..:.........:..::. 60M 42/60 70.0% 60/94230402 0.0% 0/60 0.0% 88070110 NA +3058 chr4 + 190214555 155500140 155500139 155500226 87 CTTTTCTTTTTTTTCTTTCCTTCCTTTTCCTTTCCTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTGGAGGTAGGG-----TCTCACTCTG chr4 - 94230402 70081425 70081424 70081516 24148887 24148886 24148978 92 CTTGTCTTTTTTTTTTTCTTCCACTCACACAGTGATTTTTTTCTCTCTCTCTTTTTTTTTTTTTCCTTAAAATAAGGCTTATTGTTACTCTG ...x..........:..:::::x..:x:x.xx.xx..:......:...:.:.............::.x:.::..:..-----.x.:...... 77M5I10M 58/87 66.7% 92/94230402 0.0% 5/87 5.7% 85418715 NA +3300 chr4 + 190214555 155513993 155513992 155514058 66 AGAAAAGAAAGAAAATGCAAAACAAACAAACAAACAAAAAAACTATGCAAAGTCTTCACTTAACCT chr4 - 94230402 10006765 10006764 10006830 84223573 84223572 84223638 66 AGAAAACATAAAAATGGTAAAACAAACAAACAAAAAAAAAAACCATCCAGATTTTCAATTTAGTCT ......x.x.:...xx.:................x........:..x..:.x.:.:x.:...::.. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 145507228 44707327 +3053 chr4 + 190214555 155541535 155541534 155541590 56 AAAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAGAGAAACAAAGACTGATGGAA chr4 - 94230402 25781766 25781765 25781821 68448582 68448581 68448637 56 AGAAAAAGAAAGAAAGAAAAAGAAAAACAGGGGAGGAGAAATTTAAATTAATAGAA .:.....:...:...............x.:.::.:......:xx.:.:.:..:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 129759769 60454786 +3037 chr4 + 190214555 155548048 155548047 155548103 56 TTGGCTTAAACAAATAAGAAAAAAATAAAATATATGAAATAACAATTTTAGATCAC chr4 - 94230402 36450627 36450626 36450682 57779721 57779720 57779776 56 TTGCATTAAACAAATGAAAAAAAAAGAAAATCCATGTAATAGCAACTGTAAATTAC ...xx..........:.:.......x.....x:...x....:...:.x..:..:.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 119097421 71117134 +3029 chr4 + 190214555 155549113 155549112 155549164 52 CAACAATGTCAATTTTACATCTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 43556369 43556368 43556420 50673983 50673982 50674034 52 CAACAAGTTCAGTGTTGTTCCTGGCAGAAAAAAAAAAAAAAAAACAGAAAAA ......xx...:.x..::x:......:.................x.:..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 111992744 78221811 +3024 chr4 + 190214555 155569907 155569906 155569954 48 AAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGGGGAAGGGAAGGG chr4 - 94230402 37322393 37322392 37322440 56907963 56907962 56908010 48 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGG .....:....:...:.....:...:.:....:.x..:.:...:..... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 118247514 71967041 +3297 chr4 + 190214555 155599393 155599392 155599434 42 TTCCTGGTTTTGTTTTTTGGGGTTTTGTTTGTTTGTTTGTTT chr4 - 94230402 77040873 77040872 77040914 17189489 17189488 17189530 42 TTCCTGTTTTTGATTTTTGTGGTTTTGTTTGTTTGTTTGTTT ......x.....x......x...................... 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 78558520 NA +3453 chr4 + 190214555 155604021 155604020 155604092 72 CTGCAACCTCTGCCCCCCGGGTTCAAGTAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x.::.:..........:x...x.xx.x........:..:.........:.:....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 137406895 52807660 +3225 chr4 + 190214555 155606687 155606686 155606760 74 CTGCAACCTCTGCCTTCCGGGTTCATGCGATTCTTCTGCCTCAGACTCCCAAGCAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x....:.......x.:.x...x:xx.x.....x..::....:......:......x.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 137409561 52804994 +3078 chr4 + 190214555 155624292 155624291 155624371 80 GAAAGGAAAGGAAAAGAAGAAAGAAAAAGAAAGAGAAAGAAGAGAGAAAAAGAAAGAAAGAAGAGAGAAAAAGAAAAGAA chr4 - 94230402 70253823 70253822 70253902 23976501 23976500 23976580 80 GAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA .....:xx.......:......:.:.......:x.:.x..:x.:.::....x.x...x::..x:::x...x.:....... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 85370469 NA +3374 chr4 + 190214555 155637061 155637060 155637132 72 TGCTAACCTTAACAGCCTTGCAGAGTATTGGTGTTTTTTTGTTGTGGTTGTTTTTGTTTGTTTGTTTGTTTG chr4 - 94230402 17488367 17488366 17488438 76741965 76741964 76742036 72 TGCTAATTCAAGCAGCAGTTCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTG ......:::x.:....xx.x.x.xx.:..x.xx............x......x..x................ 72M 54/72 75.0% 72/94230402 0.0% 0/72 0.0% 138148694 52065861 +3188 chr4 + 190214555 155637093 155637092 155637133 41 GTTTTTTTGTTGTGGTTGTTTTTGTTTGTTTGTTTGTTTGT chr4 - 94230402 4919482 4919481 4919522 89310881 89310880 89310921 41 GTTTTTTTGTTGTTGTTGTTTTTGTTTGTTTGTTTTTATGT .............x.....................x.x... 41M 38/41 92.7% 41/94230402 0.0% 0/41 0.0% 150717611 39496944 +3014 chr4 + 190214555 155660410 155660409 155660464 55 AAGTTTCTCTCTCCTTCCCTTCCTCTCTCCCTCCCTCCCCTTCTTCCCTCCTTTT chr4 - 94230402 13999052 13999051 13999106 80231297 80231296 80231351 55 AAGTTTCCATTTCCTGCCCTTTTTATTTCCCCCCCCCCCCTTTTTTTTTCCTGTT .......:x.:....x.....::.x.:....:...:......:..:::....x.. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 141661358 48553197 +3219 chr4 + 190214555 155666623 155666622 155666683 61 ATTTTCCTGGAG-----TCCCCTCCAATTTTTTTCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTT chr4 - 94230402 47207609 47207608 47207674 47022729 47022728 47022794 66 ATCTTCCTGAAAATCACTTTCCTGACATTCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTT ..:......:.:-----.::...xxx...:.:.x.x.............................. 12M5I49M 49/61 80.3% 66/94230402 0.0% 5/61 8.2% 108459014 81755541 +3097 chr4 + 190214555 155666647 155666646 155666688 42 TTTTTCTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTGTCCC chr4 - 94230402 18929912 18929911 18929953 75300450 75300449 75300491 42 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCC ...:...:...........:.:.:............x..... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 136736735 53477820 +3097 chr4 + 190214555 155674338 155674337 155674399 62 AGCGAGACTCCATCTAAAAAAAAAAAAGAAAGAAAGAAAGAAACAAAGAAACAAAGAAAACA chr4 - 94230402 52513787 52513786 52513845 41716558 41716557 41716616 59 AGCCAGACTTAATATGAAAGGACAAAGGAAAGCAAGAAAGAGACAAAGA---AAAGAGAACA ...x.....:x..x.:...::.x...:.....x........:.......---.....:.... 49M3D10M 47/59 79.7% 59/94230402 0.0% 3/59 5.1% 103160551 87054004 +3061 chr4 + 190214555 155674812 155674811 155674861 50 CTAAAATAACAATAAAAGGCATAATATAGTAAATACATAAACCAATAAAA chr4 - 94230402 4515855 4515854 4515904 89714499 89714498 89714548 50 CTGAAATAACAAGAAAATGCACAATATGGCAAATACAGGAGCCAATATAA ..:.........x....x...:.....:.:.......x:.:......x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 151158957 39055598 +4091 chr4 + 190214555 155786349 155786348 155786431 83 CTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCCCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:...........:.x...x..x.x........::...........:......--.:...x....:::. 67M2D14M 61/81 75.3% 81/94230402 0.0% 2/81 2.5% 137589223 52625332 +3136 chr4 + 190214555 155786436 155786435 155786493 58 GCTAATTTTTGTATTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATG chr4 - 94230402 40116864 40116863 40116921 54113482 54113481 54113539 58 GCTAATGCTTGCTTTTTCTATCTTTATGCATTTTTTCTTTTTTTTTTTTTCTGGCATG ......x:...:x......x.....x.x:x......:.............:..:x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 115669572 74544983 +3481 chr4 + 190214555 155820311 155820310 155820396 86 TTCCTTCCTTCTTCTCTTTCTCTCTCTTTCTCTCTCTCTCTTTCTCTTGTTTGTTGTTGTTGTTATCCTTCCCTTGTTTGCTGTAT chr4 - 94230402 35048447 35048446 35048532 59181871 59181870 59181956 86 TCCATTTCTTAGTTTCTCTATTTTCCATTTTTTCCTTTTTTCTTTCTTAGTTGTTGTTGTTGTTACCCTGCCCTTTTATAATCTAT .:.x..:...xx.:...:.x.:.::.x..:.:..::.:.:.:.:....:x...............:...x.....x.x.:x.x... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 120771864 69442691 +3451 chr4 + 190214555 155835376 155835375 155835440 65 GAGAATTCTCCCGTTTCAAGAATAATCTGAGTTTTGGAAAAAAAAAAAAAAAGAAAAAAAAACAG chr4 - 94230402 34847696 34847695 34847760 59382643 59382642 59382707 65 GAAAAATGTTTTGTTTTTAAAATGTTCAGAGTTTTAAAGGAAAAAAAAAAAAGAAAAAAGAACAG ..:..x.x.:::....:x.:...:x..x.......::.::...................:..... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 120987680 69226875 +3001 chr4 + 190214555 155845329 155845328 155845397 69 TTTAAAAGGCCTTCAGGTTTTTGTGGGTTTTTTTTTTGTTTTTCTCTCCTAAGACTTTGTCTTTTTTTT chr4 - 94230402 14562632 14562631 14562700 79667703 79667702 79667771 69 TTTAGAAGGCTTTTGTTTTGTTGTGGGTTGTTTTTTTTTTTTTTTTTTCCCCAGGCTCACCTTTTTTTT ....:.....:..::xx..x.........x.......x.....:.:.:.:xx::x:.:::......... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 141282697 48931858 +3600 chr4 + 190214555 155855702 155855701 155855770 69 ATATAAATATATATCTATATGTGTGTGTATATATATACATATATATAAAGAGAGAAGAAAATAAAAATA chr4 - 94230402 33398803 33398802 33398871 60831532 60831531 60831600 69 ATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATA ........:...x.xx.x:....:....:.:....:.........:.x.......:::.:.:.:.:... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 122456899 67757656 +3301 chr4 + 190214555 155909912 155909911 155909993 82 CCTCCCCTCCCCTCTCCCCTCCCCTCTCCCC-TCCCCCCCCTTTCTCTTCTCTGCTCTTCTCCTCTCCTCTCTTTCCCTTCCC chr4 - 94230402 23891372 23891371 23891448 70338955 70338954 70339031 77 CTTTCACTCTCCCCACCCCGCCACCCCCCCCACCCCCCCTCTTTCTCCTCTCGTTTCTT------TCTTTTTTTCCCCTTCCC .:.:.x...:..:.x....x..x.:.:....-:......:.......:....xx:....------..:.:.:..:........ 31M1I27M6D18M 56/76 73.7% 77/94230402 0.0% 7/76 9.2% 132018540 58196015 +3283 chr4 + 190214555 155916955 155916954 155917006 52 AAAAACAAAACAAAACAAAACAACAACAAAAAAAACAAAACAAAAAAACAAA chr4 - 94230402 70931659 70931658 70931710 23298693 23298692 23298744 52 AAAAAGAGAACAAAACAAAACAACAACAACAAAAACTAAAAAAGTAAAAAAA .....x.:.....................x......x...x..:x...x... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 84985296 NA +4019 chr4 + 190214555 155957327 155957326 155957400 74 CTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTTCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:...........x...x:xx.x........:............:......x...... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 137760201 52454354 +3864 chr4 + 190214555 155973521 155973520 155973628 108 TCTGCAACCTTGCACTCCTGGGCTCAAGCAATCCTGATACCTCAGCCTCTCGAGTAGCTGGGACTATAGGAATACGCCACTGTA-----------CCTGGCACTCCATATTTTTCTAAA chr4 - 94230402 18197125 18197124 18197241 76033162 76033161 76033278 117 TCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTGTATCATCCTTTCATGACATTACATACTTTCCCAAA ...:..:..:x:x:..:.....:.....::x.:.xx.x:x........:..:.........:....:.x.--.:.:.......:-----------.x..:..:.x....:...:.:... 70M2D12M11I24M 73/106 68.9% 117/94230402 0.0% 13/106 12.3% 137776396 52438159 +3000 chr4 + 190214555 155983228 155983227 155983274 47 TGTGTGCATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGGGATTCTAC chr4 - 94230402 81022623 81022622 81022669 13207734 13207733 13207780 47 TGTGTGCATGTGTGCATGTGTTAGAGAGAGGGAGAGAAGATGTCTAC ..............::.....xx.......:......:.:xx..... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 74960605 NA +3025 chr4 + 190214555 155983236 155983235 155983268 33 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGGGA chr4 - 94230402 18982317 18982316 18982349 75248054 75248053 75248086 33 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA ..............................:.. 33M 32/33 97.0% 33/94230402 0.0% 0/33 0.0% 137000919 53213636 +3237 chr4 + 190214555 156013882 156013881 156014082 201 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA--AGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAA---------GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA------------------AGAAGAAGAAGAAG------------AAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGA chr4 - 94230402 59321978 59321977 59322220 34908183 34908182 34908425 243 AGAAGAGGAGGAGCAGCAGCAAAGACAACAACAAGAGGAGCAGCACATTGGGAGGAACGGAGAGATAAGAGAAGAACCTGGGTTTGATGACAGACGTGAGTCCCAGCAAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGA ......:..:..:x.:x.:x..::.x..x..x....:..--..x.x.xx::..:...-.:...::x.::.......---------..x..x::.x:x..:xxxx.:x.....x.:xx.......:.------------------..x:..x......x------------...::.....x..x..x...x.x.xx.:x..xx.:.....:....x.........:......:x...xx.... 39M2I16M1I18M9I41M18I14M12I73M 130/201 64.7% 243/94230402 0.0% 42/201 20.9% 96691904 93522651 +3069 chr4 + 190214555 156013980 156013979 156014061 82 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx:...:.....:.x:..............::x...xx.....::x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 96691832 93522723 +3200 chr4 + 190214555 156013986 156013985 156014067 82 AAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx..x..xx....:.....:.x...:...........::x...xx....:::x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 96691838 93522717 +3209 chr4 + 190214555 156013989 156013988 156014070 82 AAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx....:.......x...:...........::x...xx.:...::x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 96691841 93522714 +3098 chr4 + 190214555 156013998 156013997 156014079 82 AAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x.:x...x.x.xx.:x..xx.:.....:....x...:............:x...xx....:::x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 96691850 93522705 +3458 chr4 + 190214555 156027469 156027468 156027554 86 TGTGTGTGTGTGTGTGTGTATATACACACATATGTGTATAATAT-ATATACACATACTACATTTTCTAT-----TATATAATTATATGTTAT chr4 - 94230402 40224679 40224678 40224770 54005633 54005632 54005724 92 TGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGT .............:...:......x.:..........x:.....-..x.::xx..x..:....:x:..:-----..x:...:..x.....:. 44M1I24M5I18M 64/86 74.4% 92/94230402 0.0% 6/86 7.0% 115802790 74411765 +3665 chr4 + 190214555 156027494 156027493 156027662 169 ACACATATGTGTATAATATATATACACATACTA--CATTTTCTATTATATAATTATATGTTATATATAAATATATATAGTATATAAATATATAGATAGTATATATATATAATTCATTGTGTGTATATACATATACACACACACACACACACACACACACACACACACAATG chr4 - 94230402 14964726 14964725 14964886 79265517 79265516 79265677 161 ACTCATAAATGTATAA-----ATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACT-----CAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTG ..x....x:.......-----.....x:.:..:--..:..x.x:xx..::.x..:..:::.-----:...x.x::.x...::..xx.....x..:.:x.:.:x.:.:.x.xx.xx...:....::.:..:.:..:::.:.:...xx........::............x.. 16M5D12M2I26M5D105M 99/159 62.3% 161/94230402 0.0% 12/159 7.5% 141062768 49151787 +3015 chr4 + 190214555 156027590 156027589 156027635 46 TATATATATATAATTCATTGTGTGTATATACATATACACACACACA chr4 - 94230402 59708346 59708345 59708391 34522012 34522011 34522057 46 TATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ......:..xx....:x:.....:........:............. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 96319244 93895311 +4134 chr4 + 190214555 156046528 156046527 156046619 92 TCTTTTCCTTTTTCCTTCCTTCCTTCC-----------------TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTCCTCCTTCCTCCCCTCCCCTCCCCTCTCTTCCC chr4 - 94230402 92729594 92729593 92729702 1500701 1500700 1500809 109 ttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCC .:......x............:x....-----------------..:..:.:..:.:.x:..::.....:.:.:.:.::x....:.....:.x...::.:......... 27M17I65M 66/92 71.7% 109/94230402 0.0% 17/92 18.5% 63316934 NA +3422 chr4 + 190214555 156050035 156050034 156050124 90 TAAAAAAAAAAAAATTAAAAAAAAAATAGTAAAAAAAAAAAAAAAGATTATAGCTAA----GAAACAAAAACTCATAAAATAAAATGATAGAAA chr4 - 94230402 45628603 45628602 45628696 48601707 48601706 48601800 94 TAAAAAAAGGGGGATGAGAAAAAAAATAGGAAAAAAAAAAGAAAGTATCTTAAATAAAGGGAAAAAGAGAACTGGAAGAATCAAAGGATGAAGA ........:::::..x.:...........x..........:...:x..:x..:x...----:...x:.:....x:x.:...x...x...::.:. 57M4I33M 62/90 68.9% 94/94230402 0.0% 4/90 4.4% 110421432 79793123 +3033 chr4 + 190214555 156059721 156059720 156059771 51 TAAATCATTATATATGTAATGATATATAGATATATATAATAAATCACGACC chr4 - 94230402 24631159 24631158 24631209 69599194 69599193 69599244 51 TAAATATTTATTGATGTAATGATATATATATATATATGGCAAATCATAACC .....xx....xx...............x........:::......::... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 131428562 58785993 +3602 chr4 + 190214555 156100395 156100394 156100623 229 TCTTTTATTTACAATAAACTTTTCTTCTTTTTAGAGAATTAAGTGAGAGAATGAAATCCCAACACACACACACATATATATA-----TACACACACATATATATTTGTGTGTGTGCTTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAT---ATATA----------TATGCATGCCTCAGAGTACTGAAAAATTAGGCATTGTTCCCTGTTGGCTTTAAGGTTTGTTTT chr4 - 94230402 40224564 40224563 40224796 54005607 54005606 54005839 233 TTTTTTTTTTACA---------TTTTCCTCCTAACAGCTT---TGTCAGAATTAAACAC--ACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGTTTT .:....x......---------.:...:.::..:x::x..---..xx.....x...:x.--...x..xx:.....:....x.-----...x:.:......:..x:.x.x....::x:x.x..:x:.x.x.............:...:.:.:..x...:....:.:.---.....----------.x.....x.x.:.x.xxxx.:.:x..:..::::.....x:..:.xx.:..xx.x::x...... 13M9D18M3D16M2D21M5I79M3I5M10I63M 137/215 63.7% 233/94230402 0.0% 32/215 14.9% 115875831 74338724 +3279 chr4 + 190214555 156100453 156100452 156100525 73 CCAACACACACACACATATATATATACACACACATATATAT----TTGTGTG--TGTGCTTGCACGTGTGTGTGTGTGT chr4 - 94230402 71630127 71630126 71630205 22600198 22600197 22600276 79 CTATCACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .:.x...x:..:::...::.....:.......x.....:..----....:..--....:.....:...x:.:....... 41M4I7M2I25M 55/73 75.3% 79/94230402 0.0% 6/73 8.2% 84470326 NA +3028 chr4 + 190214555 156100486 156100485 156100567 82 ATATATATTTGTGTGTGTGCTTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATGCAT chr4 - 94230402 57691381 57691380 57691462 36538941 36538940 36539022 82 ATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCAT ...:x.::.:x:..:x....x.:..:.:x.......:..:x.........:::.x....:x...x.....x.xx..x..... 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 98409105 91805450 +3059 chr4 + 190214555 156100499 156100498 156100568 70 TGTGTGCTTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATGCATG chr4 - 94230402 32959568 32959567 32959629 61270774 61270773 61270835 62 TGTGTACCTATACATGAGTGTCTGTGTACGTGC--------GTATATACATATATACAAATATATTCATG .....:.:.::..:..x....x.....::...:--------.......:.......:.x......x.... 33M8D29M 48/62 77.4% 62/94230402 0.0% 8/62 12.9% 123140931 67073624 +3036 chr4 + 190214555 156100521 156100520 156100560 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 66279239 NA +3264 chr4 + 190214555 156120089 156120088 156120138 50 TGTACACATATATGTGTGTATATATATATATATACATACACATATATATG chr4 - 94230402 56650835 56650834 56650884 37579519 37579518 37579568 50 TGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATATG ..:...xx......:....::..x......:.....:............. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 99469254 90745301 +3780 chr4 + 190214555 156161700 156161699 156161813 114 AACTACATATATATATTTCCATATGTA---TGTGTTTATATAAATATGT-GTGTATATAT-TATATGTGTGTATATATATGTGTATGTGTATATATACACATATATGTACACACACACA chr4 - 94230402 14964765 14964764 14964883 79265520 79265519 79265638 119 AAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ..x.:...x.:..:.:.:xx.x.x.:.---..::........:.x:...-...x.:.:.x-...:.x..:..:.::.:.:........:....:.xx....:.:...:........... 27M3I19M1I10M1I58M 78/114 68.4% 119/94230402 0.0% 5/114 4.4% 141196935 49017620 +3590 chr4 + 190214555 156161734 156161733 156161835 102 ATATAAATATGTGTGTATATATTATATGTGTGTATATATATGTGTATGTGTATATATACACATATATGTACACACACACATATAATGTATATACATATGTAT chr4 - 94230402 33398780 33398779 33398880 60831523 60831522 60831623 101 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGA-GACAGAGATAGATAtgtat .....x.:.::..:.:.:.x.::....:x:.....x..x.x....::....:.:.............::...x.x.x.x.x.-:.::x.x...x........ 82M1D19M 68/101 67.3% 101/94230402 0.0% 1/101 1.0% 122762954 67451601 +3023 chr4 + 190214555 156186787 156186786 156186835 49 TTTATGTGCATATATATATATATATATACACACACATATATATATATGC chr4 - 94230402 64433216 64433215 64433264 29797139 29797138 29797187 49 TCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.x....::.........x..:.:........:....::...:..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 91753571 NA +3523 chr4 + 190214555 156210932 156210931 156211074 143 TTCAGCAAAGTTTCAGGTT-----ACGAAAGATTTTTGTTGGTGGTGGTTTTTATTGTTCTTTTGTTCTTTTTTGTTTTTGTCTTTTATCTTTTTGTTTAATTTTTTTTGTAGGATACAAAATCAGTGTATGTATTAGTATGTTTTCA chr4 - 94230402 35915374 35915373 35915514 58314889 58314888 58315029 141 TTTAGAAACATCTTAGGCTGTTTGACCAAAG-----TGTTGCTGGTGTTTTTTATTGTTTTTTTCCTCTGTATTTTTACCATGTAGTATAATTATATTATATCTTTTTTGTATGATTTACAAATAATG--TGTCTCAAGCTATTTTCA ..:..x..x:.:.:...:.-----..x....-----.....x.....x...........:....x:...x.x..x..x:::.x.xx...xx..x.:..xx..:.........x...x:.x..x:.:..--...x.:.:xx.:...... 19M5I7M5D92M2D18M 93/136 68.4% 141/94230402 0.0% 12/136 8.8% 120295558 69918997 +3365 chr4 + 190214555 156230914 156230913 156230989 76 TGTGTGTTTGTGTGTGTGTACATTTGTTCATATATGTGTGTATTT---CAGAGAGTCAGTCCATCATTG-TTTTTCAGCT chr4 - 94230402 70982629 70982628 70982708 23247695 23247694 23247774 80 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTGGATTGTTCAGCT .......x...:...........x........x........::x.---..x.x:....:x:....x.x.-..x....... 45M3I21M1I10M 60/76 78.9% 80/94230402 0.0% 4/76 5.3% 85248285 NA +3032 chr4 + 190214555 156241777 156241776 156241838 62 TCCTTAAGATCATTTTACTATCTATTTTCTTTTTCTTTTTCTCTCTCTTTTTTTTTTTTTTT chr4 - 94230402 47207613 47207612 47207674 47022729 47022728 47022790 62 TCCTGAAAATCACTTTCCTGACATTCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTT ....x..:....:...x..:x.xx.:.::x:x....:.:.........:............. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 109034164 81180391 +3153 chr4 + 190214555 156263907 156263906 156263946 40 TTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGAGAGAG chr4 - 94230402 67837418 67837417 67837457 26392946 26392945 26392985 40 TTTCATTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAGAG ....x..x.:.............................. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 88426489 NA +3369 chr4 + 190214555 156325110 156325109 156325160 51 TATGAGATATATATATATATCTCATATATACATGTGAGATATATATATGAG chr4 - 94230402 15418492 15418491 15418542 78811861 78811860 78811911 51 TATAAGATATATATATCTATCATATATATACATAAGAGATATATACAAGAG ...:............x....x:..........:x..........:.x... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 140906618 49307937 +3101 chr4 + 190214555 156362369 156362368 156362457 89 AGTAAGTTTTGCCTGATCCTCTATTTTTCTTTAAATTCAAAGTGAAGATTTTTATTAATTAATTATTTACTCTCTCTTATTTTTATTTT chr4 - 94230402 66706993 66706992 66707078 27523325 27523324 27523410 86 AGTAAGCT---CACAATTCACTATCATTTTATTAATTCAGATTGAAAATTTTTATCATGTGATTATTTCCTGACCTTTCTGTCTATTTT ......:.---.x::..:.x....:x..:.x.x......:.x....:........:.xx.:.......x..xx.::..x.x.:...... 8M3D78M 60/86 69.8% 86/94230402 0.0% 3/86 3.5% 89655376 NA +3140 chr4 + 190214555 156452973 156452972 156453026 54 ATTTCCTTATTTCTTTTGTTTGCATGTTTTTTTTTTTTTGTTTTTTTTTTTTTT chr4 - 94230402 16595570 16595569 16595623 77634780 77634779 77634833 54 ATTTCTGTATGACTTTTGTTTGCTTGTTTTCTTTTTTTTTTTTTTGCATTTTTT .....:x...xx...........x......:........x.....x:x...... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 139857403 50357152 +3074 chr4 + 190214555 156501159 156501158 156501224 66 AAAAAAAAAAAAAAAAAAAAAGCAAAGCAAAGAAAAGAAAGCTAAGTAGGTATTGGCATTAGAAAT chr4 - 94230402 47152907 47152906 47152972 47077431 47077430 47077496 66 AAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATATTACAATTAACAAT ..................xx..x..x......x...:...xx..x...x:....:xx....:x... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 109348252 80866303 +3062 chr4 + 190214555 156533056 156533055 156533130 75 TACAAATACACACACACACACACACACACACACACCTCTTTATATTCACTTTCTCTCTGAAAAAGAAATGGTATT chr4 - 94230402 82109343 82109342 82109417 12120986 12120985 12121060 75 TACAGGCACATACATATCCACACACACACATACACCTTTGTATAAGTCCATGTTCCCTGAAGAAATATTTGCGTT ....:::...:...:.:x............:......:.x....xx:x.x.x:..:.....:..:x.x.x.::.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 74423713 NA +3379 chr4 + 190214555 156569222 156569221 156569275 54 TTTGTTAAAGAAGCCAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAA chr4 - 94230402 68654336 68654335 68654389 25576014 25576013 25576067 54 TCTGTTTAAAAAAGAAAAACAAAACAAAACCAACCAACAAACAAACAAACCAAA .:....x..:..:xx...............x...x...............x... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 87914886 NA +3324 chr4 + 190214555 156585247 156585246 156585350 104 TTGTTGATAAGTTTT---TGCATTTTGTTATTTTCTTGCTAAATATATGTACCTATAAACTATATATAAATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 68835789 68835788 68835893 25394510 25394509 25394614 105 TTGGTGGTAGGTATCACGTGGTCTTTGTTTAATCCTT--TAAATGTATGTGACAATATATTATCCCTCAGAACATATATATATATATGTATTTTTTACTTCTTGTTT ...x..:..:..x.:---..xx:......xxx.:...--.....:.....:x.x...x.:...x:x.x.:x.:..............:........x:..:..x... 15M3I19M2D68M 72/102 70.6% 105/94230402 0.0% 5/102 4.9% 87749458 NA +3001 chr4 + 190214555 156585300 156585299 156585360 61 AAACTATATATAAATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 4200270 4200269 4200330 90030073 90030072 90030133 61 AAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAG ...:..x.....x......:.:.:.........x....::...:xxx.......x...x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 152385030 37829525 +3243 chr4 + 190214555 156647796 156647795 156647876 81 CAACAAGAAATAGTCAAAGGCAAATATGTGTATATATATATATGTAAATATATGTGTGTGTGTGTGTGTGTGTGTGTGCAT chr4 - 94230402 19704252 19704251 19704329 74526074 74526073 74526151 78 CAGAAACAAGCAACCTGAAGCAA---TCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..:x..x..::.::.x:.:....---.x.:x...:.......:...x....x.....:...x::..............x.. 23M3D55M 56/78 71.8% 78/94230402 0.0% 3/78 3.8% 136943544 53271011 +3066 chr4 + 190214555 156734128 156734127 156734203 76 TGGGAAAGGGATGTTCCCAAAAATAACTTCAGGTCAGTCTTTCTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 13493027 13493026 13493102 80737301 80737300 80737376 76 TGAAAAAACGATGTCCTCAAGCATACCTCTAAATAGATGTTTACTTGGTTTTGTCCTTTTTTTTTTTTTTTTTTTG ..::...:x.....:.:...:x...x..::.::.x::.x...x:.xxx....x.::.................... 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 143241101 46973454 +3066 chr4 + 190214555 156737550 156737549 156737605 56 TGTGTGTGTGTGCATGCATGTGTGTGTCTGTGCGTGCATGTGTGTGTCTGTGTGTG chr4 - 94230402 93350247 93350246 93350302 880101 880100 880156 56 TATACATGTGTGCATGCATGTGTGTGTCCTGGCACATACAAGTGTGTCTGTGCATG .:.:::......................:xx..::::.::x...........::.. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 63387303 NA +33678 chr4 + 190214555 156761583 156761582 156763217 1635 AGAAATAAATCTTGAGCACACACACACATAATTTTCTCCCCAAAATAGCCACATTCTTTTATTTGATGATTCAATACATTTTTGATTCAAATAGTCACCACA----TAACCTAGGCACGATATTAA-GCATTTTACAAGCAAAATATTTTACTGATTTTCTTTTAAATTGC-CAGAGTACAATAAGTGAACTGGTTAAGAGACATAC--TTCTGTACATAAAAATA-----TCCA--TGTATTTA-------TACAAGTGTATG---GAACAGAGTTTAA-----GATAAT-------AAAACCACAACATCACAAT---AAATAGGATGTGTTCCTACTGCACAGCACAGCACGCTTTATCAGGAAGCTGCCAAGTCTTTTTCAAGGTGCTTTATGTTTTTCTGAGCTAGGCTCAGATTTCCCCAAAAAAGGAATAGGTTAGTAATGGCTGGATCTGAATGTCTACTTTCATAAGTTGCTTTTTATTTTCATCTCCAAT--------AACAGGAATGGAAGATATGATAATTTAA--TTATTTTCAAAAAGTCTTTGCA---------ACTTACCAAT-----TCTATTCCA-ATTCAGTTTTTTAAAAT--GCAGA---TTAATCTAACT-CTAGCACCATAC------------------GAGAATGAAATACATGTATTTTTGT------------CAGAGCAACAATATTTT-----------------ATATCATCTTTGTTCCTCTGGCTATAACAATTGTGTTTAGAAAAATTTACCAAGCTAAAAA-TAGTTGATCTAAGTTGTCATAAAAAAGAATATTAAATACCTTTGGTAAAAATAGATATATTTAACAAGATTAGAAAAGCCAACAGTTATAATGTC-AAAAGGAGAATATAAAAATGTACACAATGA----AACAAATAAACTGA-------CTTATCGATAA----AGTGAAGATAAGGCCACTCTTCTTTTCAGGTTTATCTCTTCCAAACCATG--AATGT--AGTTCTCTTCTTCTAAATGGCAGAAATTTTAATAAGAAATATG-AAAAATCCAGTCTGTCCTATCAGC-----ACGACACAAGTTTAATTCATAGCAACATAGTTCCTTTTTAAAAACCAGGTTTGTAGTACATAGAATGTTCTGGTTTACATATGTGAATATGAGCAAAAAAAAAAAAAAAAATCCAGATTTTATACGATTTTAGGCCCAGGACA-------TGGAGCTTTAGAGTTAAGCAAGGCAACGGAATCAGGTGCTCACT-TGCA-------CAGTTTTTTTCCTGTACTGACATTAC---CCTAAGCCGTATCGAAAGAACTGAAATACAGAACCCAGCTAGTGGAATACGTACATGGTAACTCTGAAACTAGCTGGTGATCTATTTAATACAACATTTAATTTTCTTTCCACGATTGAAGACCTTTTCTCCTGTCCTTTA----GGCCTCCTCTCAAAAGAGCTGTTGCACAACTCCTAATTCTGTTTGATGTCTCCTCTTTCAGAATGCACTGTAAATCCTGAAGATGAAAGGTCCTTGAAGCAAACAACTGAGATTAAGGATGGAGATAACGCATACGTTCTCTAATAGAATCAGCCACTGCACTGCACAGCTCTGGGCAAGAGCTGC-TGGTGGTGATGCGGCTATCCTCCTGTGCTCCCTCTGCACACACAGTCACACTCCTCATGGTGCTCCAGGGCCACGTCGGTGAGTGATTTGTGCAATCCCCTGACACCGGTCTTTGGTCTCAACTGAAGGACCTGAAAGGGAA chr4 - 94230402 71841640 71841639 71843334 22387069 22387068 22388763 1695 AGATACAAATAT---GCAGTCATACAAATA--TTTCTCCCAAAATTAGCATTATTACTTTATTTGGTGATTCATTACAATCCAATAGTAaaaaataaaaataaaaataaaCTAGGCATAATGTTAAAGCATTTTACAAGCAAAATATTTTACTGTTTTCTTTTCAATTTGAATAGGGTGGGATAAGTGTATTGGTTAGAGGATATAAAGTACAGAACATAACCATAGTTGATCTAACTGTACTGAAGAACGTTACAATCCCATGAGTGAACAGGATTTAAACAGTGATAAGTCAGTGGAAAACCATA-CACTTCAATGTTAACAAGGTTGCCTTCCCATGACA---------ATGATGCATCATGAAGGCTGTAAGCCACTG-------AACTTATGTTGT----AGATCATCCTACTTTT----AAGAAACTAAAAAGTTAAACAAGCCACAATGCATCTATCTATGTTCAT---------------CTCATTTCTACTGGAACACAAGCTAGAATGGAGAGAGGGAATTTTTAACATCAGCTTCTGAAACCACTTATAGTAATGTCCATATAGTAATGTCCATCTCTTGTATATTCAGTATCATGGAGCTAGCAAAGCTTTGAGCTTTTTATTATTACCATGCTTGCAGGTTTaaaaaaaaaaaaaaaaaaaaaaaaaaCTTTTTCACTGTGTAGCAACAAAGTAAAAATATAGTGCTCCTATCCCATTGTAATCTCTTCTATGTTCCTCGAGCTGTA-CAAATCCGTCTTTAAAGATTCATAAAACTAAAAAATAGTTGATCTAGATTGTAATACAAAAGAATATTAAATACCTTTGGTAAAAATAGATATATTTAACAAGTTTAGAAAAGCAAATAGTTATATTGTCAAAAAGAAGAGTATAAAAATGTACACAATAAAAATAACAAACAAACAAAAAATCATCTCATCGGCCATAGTATTAAGAATAAAGGCATTGTTCTTTTCAATGTTTTCTTCCTTAGCTCATGTTATTGTCCAGTCTTCT--TTCTAAAAGGCAGGAGCTTTACTAGAGCATATGAAAAAATCCAGTCTTTCCTACCAGCGTTAGACAAATTAAGTTTAATTCAGAACAAGACAGT---CTGTTATAAACCAAA-TTATAAAGCAGAGAATGCTTCGA-GTACATAGGAGTAGTTGAACACAGAA--------------AGATTTCAGATGTTTTCAGCTAGGGGCCAGATGTTCTGGAGGTGTAGAAATGAAACAGCCAGCAGGATCAAGTCTCCATGATGCAAGCCTCCTAACTTTATTTTTACTCCTAAATTATAAATCCATGTATTGTCAAGAAAACTGGAG-----------------GGGACAAAAAGAAAAAAAAAACAAAACCAAC---------------AACAACATGTATTTTAAATCCCTC-ATTGATG--CCTTTCTCCCGTCCTTTAACTGGGCCTCC---AAACAGAGCTGTCATACATCACATAATCCCAGTTT-TGCTTCTCTTTTTAGAGCTCACTGTAAATCTTGAAGATGGAAGTTCCCCAAAGCAAACAACTGAGATTACAGAAGGAGATAATGCACAAGCCCCATAATAGAATCAGCAA--GGATTGAACGTGCTTCAAAGAAAACAGCACAATTAAATCATGTTTATCCTTCACTATTCCCTTTGCATACACAGTCACACTCCTCGTGGTGTTCCAAGGGTACATCTGTCAGTGATTTATGCAGTCCTCGGACACCACTCCTTGGCTTCAGCTGAAGAACCTGAAGAAGAA ...x.:....x.---...xx..:...x...--........x...x....xx:...x:........:.......x....x.::x:xxx:...x.:.x.xx.:.----...x.......::..:....-...........................x...::...:..x...x-:..:..:x:.......x.:......:::..:...x--.x.x.x......xx...-----..:.--....:.x.-------.....x:x:...---......::.....-----.....x-------.......:.-..::x....---..xx...x..:x....:.:x:..---------.:.x.x:....x....x:xx:...:.x:.x-------:x:.......x.----..x.x:x.::.xx...----..:...xx..x.:....:xx.x.x.xx:..x::xx.:....:x.....---------------:....:..:.x.--------.:.x:.......:::x:x..xxx.....--.:.x:...x:...x:x:..::.---------.:x..x:...-----...x..x:.-.......x.:x.::.::--...:.---..:.x..xx:.-:..x:.....:.------------------:.:..x:...x.x.x:x.:....x:------------..:..:..x.....xx.-----------------..x..x...x........x:...:..-...x.x:..:.xx...:...:.:x..:.......-...........::....x...x..............................................x..........x..:.......x....-.....:...:..................:.----......:....x:.-------..:....::x.----.x.:.::....:.x..:.x.........:xx..x...:::::.:x:....--.x...--...::...--.......x.....:.::....x..:::x.....-.............x.....:....-----..:.xx:............x.:...x.:...---:.x...x......::-..:..:x:..x......:.::.:-x......x.x.x.xx...:..x.:..--------------......:.x.:.x...:..x:xx:..x..-------.....x.x....:x.:.:xx..x..:.:.:....:..x::..:x-....-------:.::...x..::.::x.:x.x....:---:.:.x.:xx.:..:.:.:.....:.:-----------------..:.:.x:x.x.x::x..xxx::....:.:.---------------x.......x..x...xxx.:..x.-.....x.--.:.......:........----.......---x..x........:::...x.x.x....:.::x..x-..::..:::...:...::x...........:........:...x...:::...................x:..x........:...:.x.::.:x.............x.--.x.:..x..:xx::.x::x:.:.:.x..-:::.x:x:x:::.x:......:.xx.::.....:....:.................:.....:....:..x:..:..x..x........:....:...:.x......:x..:....::...:......:.......:::... 12M3D15M2D70M4I20M1I44M1I35M2I17M5I4M2I8M7I12M3I13M5I6M7I9M1D9M3I23M9D30M7D12M4D16M4D48M15D12M8I28M2I22M9I10M5I9M1I17M2I5M3I11M1I12M18I25M12I17M17I26M1D34M1I95M1I30M4I14M7I11M4I50M2I5M2I8M2D33M1I24M5I31M3D15M1D23M1D26M14D29M7I44M1I4M7I26M3I26M17D31M15D24M1D7M2D18M4I7M3D35M1D110M2D28M1I142M 1052/1527 68.9% 1695/94230402 0.0% 276/1527 18.1% 84919943 NA +14328 chr4 + 190214555 156767749 156767748 156768036 288 CCAAAAAGAAAATTGTA------TACCTACCTCGTGGTATTTTTTAGTAACTTTGCTTGGGACACATTGACATTCATTGCAATTGTGGAGACAACAGGCACAGTTCCCACCACAGCGTTTAACCAGGAGACAACCTGGCCAGAAAATGGTATCGGTTCTCTTTAGTTCTTCCCTTATGGACACTGAGAAGTTACGAGGTGTGCAGCTGTATAATCTTACCTCCTCTGTTAGAAGGTTCAGATCCACCACTATATGGTATAAAAGAAAGCAAAGAAAAATAGATGTTGATGCTTT chr4 - 94230402 71843901 71843900 71844177 22386226 22386225 22386502 277 CCAAACATGAAAATGTAGAAAAATGCTTACCTCGTGGTACTTTTTGGTGACTTTTGTTGGTATACATTGGCACTCATTGCAGTTCTGATGACAACAGGCACAGTTTCCACCACAACGCTTAACCAGAAGACACAGTGGCCAGAAAATGGTGTCAGTTCGCTTCAGCTCCTCTCTCAGTGACACTGAGAAGTTGCGAGGAGTACAACTATACAGCCGCACTTCCTCCTTTAGCAAGTTGAGATCAACCACTGCA---------------AAAAGACAAACAGA--CTGGTGCTTT .....x.x:...x....------.:.:............:.....:..:.....xx....x.:......:..:........:..x..:x................:........:..:........:.....xxx...............:..:....x...:..:..:..:..:.xx..............:.....x..:..:..:..:.::.x:..:.....:x....x.:...x.....x......::.---------------x.....x...:...--:..:...... 17M6I230M15D14M2D10M 211/271 77.9% 277/94230402 0.0% 23/271 8.5% 84923848 NA +13695 chr4 + 190214555 156769904 156769903 156770317 414 GTTGCCAAAGTCTTCAATGCTTATTTAAGAATTATACTTCTTTAGAATGTGAGTGAAGAAGCTCTCAGCTCT-CAAAGCATATTCACCTATGTCAAGTAGTTTTAAATATGCTATTT-CATGATAATAGAAAATGAGATTGTATACGTTTCCTTTAAAATGTTTACTTAACCACAATAAAAGGTTAGACAGATTTCCCAAGTGAACTTAGTTGTGATACCTGCTACAATGTGAAAATTTAAACACACTTTTAACTTAGCTTCCACTCATTTATCATGTTTGACACAAAAGTCAAAAGCCCTTT-TTACGTACTAGTTAAGCTTGACTTAGAAAATACAGTATTTTTTTGTAGCAGTAGCAAGGTATGAAT-GAAAACCCTGAACT----AGAGGAAGAAAGTGAAAGAAAAAAAAGTAAAGC chr4 - 94230402 71847296 71847295 71847693 22382710 22382709 22383107 398 GTGGCAAATTTATCTAGTGCTTATATAAT-----CACTTCTTTGAAGTGTGTG-AATGAAGCTGTTATTTTTTCAAAGAGTATCTGTCTGTCCAAAATTTATTTTAACGCACTGTGGGCATGAAGCTAGATGA-GAGAATGTATATATTCCCTTAAAAGTGTTTACTTAACCACAATAAAAGGTTATGTGGATTTCCCAAGTGCACTTAGTTACAGTACCTGTTATAATGTGAACATTTAAACACTCTTTCAACTTGGCTGCCACTCATATATCATGTTTGACACAACAGTCAAAGTTCTTTTGTTTAGCACTAGCTCAG--------GAGGAATGGAAGGTTCTGTAGTAGCA---------CATGAATGGAAAACACTAAAATCAAAATAAGGGAAAAGGGGAAAAAAATGGAGAAAAAC ..x..x..xx.x.::.:.......x...x-----:........::.:....x.-:.x......x.:.x:.:.-.....x:...::::..:.x:x..:.xxx...x..::::..:.xx-.....x:x....x:.-....x......::..:....x...:...........................x:::.............x........::::......:..:........x..........x....:.....:...x........x.................x.......:x:.:...-..xx.:.....:.x..--------::::...:x.:x:..:.x.x......---------:......-......x..:..x.----.x.:.:::....x.:..:....x::..x...:. 29M5D19M1D18M1I44M1I15M1D169M1I16M8D26M9D7M1I14M4I33M 279/390 71.5% 398/94230402 0.0% 32/390 8.2% 84922608 NA +18914 chr4 + 190214555 156770836 156770835 156771523 688 GTAATGTAATCTGAGGGTGGTCTTTCTAAGATGAATGTGGTAACACTGT--GATGTTTATTCTGTGG--GAAATCTATTTCAATGTCTAATTAGAAGCTTTTAAAAGTTTGAC--TCCTTATTCCTTTGTAGAGATA---CTCTCAGGAGGGGAGTTGGTTTTGTCTATATAGATGTTATCCTACACTTGTATTTTAGTTTATGTAAAGTTCCAAAAATGTACA--CTGCTTTTCTCACACTTTTTGCATGCTTAAAAAGTTAATAAATTTGGAAAACTGCAAAGGGCTTCA------------ATTTTGAAAGTGTTAAATGAATATCTGAAA-GATCTGTTCAGCTTCCGATGCTTTTGAATGCAGGC-----------TAGCCTCTGGCCAAATCTTTGAGCACCAGGCGTACATTTTCAGGCATAAAGCCTTGGCTAGAAGGGAGGTTTTTAGGCTCAAATCCAGAAATCAGCTGTCAAAAAACTAGATCTCAGTTTAGAACCTGATTCA-CTGCCCCTGCTTCTTACAGATCAACATGATAATCAACTTCAAATTTGCTAACA-AGGGCTCTATTCATGGATATTTCAGCTAGTCTTGCAGATCTTCATCTTCCTGTTCCTAAGTGGGAGGGAAGGGAAGTGTTGCTCGTAAGTTATTCATCAAGTTATTCATCAAGATCAAATCTTATAAATATGTAACAGCTTTCAGCATCTGGACAG chr4 - 94230402 71849059 71849058 71849734 22380669 22380668 22381344 676 GTAATACAGTCTGAGGGTGGTCTCTTTAAGATGAATGTGGCAATACTGTTATATGTTTATTCAGTGGAAAAAATATATTTCAGCATCTAATTAGAAGTCTTTAAAAGATTTACTGTCATCATTTCTTT-CAAAGATATGTCTTGCAGAGAGTCACTT--TTTTTTCTATGTAGATGTTATCTAACATATACATTTTAGTTTATGTGAGGTTTCACAAAT-TACATTTTGTTTTTCTCCCACTTACTCTATGCTTACGG----CATACATTTGGCAAATAGTGAAACTCTTTAACTAGACAAGTCATTAGGCAAGTGCTAAATGACTATCCGAAATAATAGGTTCACTGCTGGAAGCTTTTAAAG--AGACTTCTTCTTCTTTAACTCTTGATCTAGTTGCTGTGTGCCA-------ATCTGTAGTAACAGAGGTAAGGTTGAAGGGTTGGTTTTTAGGCTCTGATCCAAAAATCAGCCATCAAAAACTTAAACTTGAG-TTACAAAAAGTTTCATCTCCTCCTTTTTCTGACTGATCAG-ATAACAATCTGGTTTAAATTCACTGACAGAGGACTCTA-----------TTCAGTTACTCTTGTAGGTCACCATTTTCATGCTGTGTAATGGGCAAGGAAAGAGATATTAC------------------GCTATCCCTCCACATGGAATC-CATAGACACGAAATAGTGGGCAGCATCTGGACAG .....::.:..............:.:..............:..:.....--x..........x....--:....x.......:::............::........x..x..--..x.:...:....-:.:.....---..:x...:::.xx.x..--....x.....:...........:x...:x.::..............:.:...:..x....-....--:..:.......x.....x:.x:.......x::----x...x......x...:x.::..:xx...:.------------...xx.x.....:.......x....:....-:..xx.....x:x::x..x......:..x--..:.-----------..:.:::..::.x.:.:x:..x.::...-------..:.x:..xx.:.:..x:xx..:.::.:..xx.............x:.....:........::.......x:..:.::.x..-...x..xxx.x....-..x.:...x:....x..x.....:-..:.:....x:x..:.....::..:...-...:.....-----------.....:..x.....:..:..x:...:...x..:.x:xx.:....x::.:.::..::.:..:.------------------.:...:.x..x.x..x:....-:...:.:.:.x..:..:xxx.............. 49M2I16M2I44M2I13M1D8M3I17M2D60M1D4M2I32M4D30M12I30M1I29M2D4M11I28M7D82M1D15M1I24M1D28M1I9M11D62M18D21M1D34M 451/639 70.6% 676/94230402 0.0% 86/639 13.5% 84921777 NA +12792 chr4 + 190214555 156772672 156772671 156772904 233 AAGAGGGAGCTTACCTCTGGATTTTCTTCCAAAAACAAAAGCCTTGCCAAGAAGTTGCCAAGTTGGCCTATATAGATCTTCTAAGTCCAACTGCCATCTCTCTGGTTCAAGATATCGAATAAGGTCTTCCAAGGTACTAAAGGCAGTTATAGCATTATTAAGCAGGTCCAGTGGCAAAGCTGAAGGGGGTAGCACTGAAGGACTCACAGCTTCTGTGAATTGCTGAAAGTAAA chr4 - 94230402 71850344 71850343 71850576 22379827 22379826 22380059 233 AAAGAGTAACTTACCTCTTGATTTTCTCCCATGAATATATGCCTTTCCAAGAAGTTGCCACGTTGGCCTGTACAAGTCTTCCAAATCCAGCTGCCACCGATCTGGTTCAAGGTACCGGATAAGTTCTTCCACAGTACTAAATCCAGCAACAGCATTGTTTAATACATCTAGTGGCAAAGCTGATGGGGGTAGCGATGATGGGCTAGGTGCTTCTGTGTGGTGCTGCAATTAAA ..:::.x.:.........x........:...x:..:.x.x.....x..............x........:..:.::.....:..:....:......:.xx...........:..:..:.....x.......x:........xx...:x.:......:..x.::.x:..:..............x.........:x...x..:..x:xx.........x:x.....x..x.... 233M 177/233 76.0% 233/94230402 0.0% 0/233 0.0% 84922328 NA +3123 chr4 + 190214555 156787647 156787646 156787694 48 ATGGAAAAAAGAAGAAGGAGGAGGAGAGAGAGAGAAGAGTGCAGGAGG chr4 - 94230402 87619570 87619569 87619617 6610786 6610785 6610833 48 ATGGGTGAAAGAAGGAGGGGGAGAAGGGAAGGGGGAGAGTGCAGGAGG ....:x:.......:...:....:..:..::.:.:............. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 69168077 NA +3154 chr4 + 190214555 156789976 156789975 156790048 73 CAAAAAAAAAAAAAAAAAAAAAAGAAAGAATACTTTGAGGAAACATAGTATCATGGCAAGAACATGGAATTTT chr4 - 94230402 20475870 20475869 20475942 73754461 73754460 73754533 73 CAAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAATTCTT ....................:...:...x.x:x.xx..:..x.:.:..x.x...::x.:......::.x.:.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 136314106 53900449 +15848 chr4 + 190214555 156805625 156805624 156807231 1607 TTTGAAGCCTTGTTTGAGAGTTGGTTGGAGTTTTTCTTAACCTGAACATAAAAG--CAAATTTGGCTTTCAGTTAAGACTTTTCTTGACATGATATTAACAGTGAAATAACCTACTGGCATATGTCAGAAGGGATGAAAAAAAATATCCTCCCTCCTCTTTTCCCCCTCTCACTTCAATATTCACTGTGCTGCTTTGTTCACCATATCCTGCATAATTAATAACCACTTTGGCAATCAGTCATGCATTCCTTAATAGCACCTCAGGCATCAAGTGTCCT-TCTAACCCCTCCCCACAGAAACCCTACACCCTTCCACA--GGGCATGCTG-GCCAGTACGCCGTCTGA---ACTCTGGATAAGTCATTTACAAAATCACCATTAAG---AAAAACACACAGTGGGGGTTATAATGTGGCTATAATACTTACATACTA-----------TACTATATTATTAATCTTTGTATATAATTTAATAACAAGAATAAACAAGATTCACTTGTATATTCAAACAAGTATCACTGATTATACATAGTTTTTTAAAATGTAAAATCATAGAAGTGATAGAACAAATCAGGCGGC----------AACTTAAAGGAAGATGAAGTTCACTGAAGTGTTGTGAGTTAAAGTACTCTTCAGTTCATCCACC------CCCT---------GCCCAGCTTATCAG---GCAAAGAAAAAG----AGGGTA-AATATACATTGACTCAATTTGTATGGTGGCTATAACTTCTAATTCTCTTAATATAAACTGATATACTCATTAAATGGAAAAAAGTAAA-----TAAATTATTGTAAACATTATCATTACTTTGGATCAGAAACCTTAGACTAAGAGACTGAAAAATATAATATTC--ATTAAAACCATTTAAGAAAAATCAGTGGTAATCATTTTTCATAATGTTAACCAAATTGGAGGGAGAATAAGAAAATCTTCAAATCTCACAGACATTAAAAAAACAACAAATAGCACTGTACTCAAGAAGAATAGTTCTAAATATAAG--ACTAAAATAACTTTAAAAATTCAG--ATTTAGATT------------TGTATATTTTACTTAAAAATAGGTATGGTTTAA------------------TTGAAGCAGT--TTTCTGACCA------------------AAAAATATGCAGTACTTTTTACTTTTAGAACTGAGAAATAAAACTTTTAATAAAGTCTTTTGATTCTGGAGCAAAAGTTATTATTTC---AGCCTTTTTAGGTTT-CTTATCATTTTAAATAATGGT--GCTTATGCTACAGTACACAGAG-TAAAACATATATAATCTATTATAAATTACTCCAAAATTAAAC-AAGAAATTTTCCTTTCTTTCTAAAAGATCTG-AAATGTGTTCTGGG-CTCTCACCGTGTGTGGCCTCCAA--ACAGAAACAAGCTTGCACTGTTTTATTTCAGTTTTGCTTCATTTCTTCCCAAACAATCTCTCACTGCTAATCTACCAGGTCTTTTTTTTTTTTCTCTTTTAGCAGAAA-----GGGAAAAAAA----TCAAAGACATTAACTCCTTAGGCACAA-TCATAAAAGTTGAACACTGTATGTATCA--------TTTGGCATCAATTTGCAGAAATTTATTTTTTATTAGTTATTAATGGAG-------------CATGACTGGAGAATAATATTTCTATAAATAATTCTCTAAAATATCATTGAAATGCTGTA-ATTTTAAAATTATGTA chr4 - 94230402 71871746 71871745 71873312 22357091 22357090 22358657 1567 TTTTAAGACTCCTTTAAGATCTTGCTA---TTCATATTCACTTGCAGAGAAGAGGGCTAAGTCTGTTCTCAGCAAAGATTTTT---AGCATGATCTTCCATGACAAATAACATGCTGCAATATGCCAAAA---AAGAAGGGGAATATAGTCACCCCCA-------------GCTTCAACATAACTGGAGCTGCTTTGTTTTGAGTGCCCTGAATAATTAATAACTACTTTGGCAATCAGTCATGCATTCCTTAATGGCACCTTAGGCATCAAGTATCCCATTTACCCTCTCCCCCAAGTAAAAATGGGCTTTATTACATCAAGTTTTCTATGCCAAACTTGTAACTGACATAATTTCAATGAGTCATTAGAAAGAC-----TGAAGCCCAAACACATATTGTAGGAGTT----------TGTGAGGTTTCCCCTCAAGTGTGTGTGGCTACTATATTAATTAGACCTGTAAA-----TGGGGGCAAGTGAAAAGGAGG-------GGA-----AAAGAAATGACA-----TATAGATTGTTTTTTGCAATAT-ATTTCTAGGTGGTTTTGGATTATATAACGCTGCCAAATACATGACTTTTAATAAACACGTAG----CTGAA-------CAGTCAAAATG-----CAGAACAACCACTAAACAACCCTTAGTGAATAATGCAGCTCACCAGCAAGCACTGACTAAGTGACAGGGTACAGCATGAAAAGA-------------GTGCCTAAGAATAACAATTGTGCTG----AAAGTAGCAGAATTTTGAAATAACACAAGTTAAATTTTCTTAGCAAAAGTAAGCTTTTTCAACACTT-----------CCTTGCACT-------------TTACAGTGTTCCAATTAA---CTTGCAACAAAAGAACATAGT-----------------TAAACCAA-----------AATTAGAGAACGTTC----TTCTAAGA------------------------TGTACTCATGATACACAATTTAAAATGGAAGAAAATCAAATAATT---AAAATGCAGTTATCTAGATTCTCAAGCAAAGCTGTGTGATTGTCTCAGGAAACGTTCTGCTTGTATACAGCATACCCACGGTTTTTAAGCAGTGACTCATAACCCTGTGTTAAATGTTTCTATAAAGCTATGTTGCACTGAATGCCATTGGAACTGCT-ATTAGTACTTTT----GAGTGGCTAAATCCTAGAAGTAAGGTAATCAGATCAATAGCCATTTTCCCTCTACTTATTAGTCATAGGAAAAGTTAGTTTGAAATATAATATACAAAGTTAAAAAATATGTA---TACAATAAATTACAGGAGGCTTAAACAAAGCTATTTCTCTTGCTCTTTAAAAGACCTGAAAATGTGTCCAGTGCCTCTCTCTGTGTGTGGCCTCCAAATACAGAAACAAGCTTGCACTGTTTTATTTCAGTTTTGCTTCATTTCTCCCCAAACAATCTCTCATTGCTAGTCTACCAGG-CATCTCCCCCTCCCCCTTTTCTTAAAAAACGGGGGGaaaaaaaaaataaaaaaaaattaaCTGTTTAGGACCAATTCATAAAAGTGAATTACTAAGCAAATCGGTGATGTTTTTTGCAAGAATCATTTAAAAATTA-CATTCATTTCTGATTTCTGTAGCTGACATCTTTCACATGAATGGGGAATG------CCATAAAT-----TTTAATTTATC-TTGAAATGTAGGATGATCTAGCATTATGTA ...x...x..:x...:...x:.x.:.:---..:x.x..x..:..x.x.x..:..--.x..x.:x.:.:....:x....:....---::......x..xxxx.xx.......x.:...xx.....:..:..---.x...::::.....xx..x.:..:x-------------:......:..xxx:x.x...........:xxx:.::....x............:..............................:......:...........:...:-.:..x..:......xx..x..xxx.:x:.::.x::...--::.:x.x..:-....:xx:xx::x....---.x.:.x:..:.......x:x..:.:-----.x...---...x...:.:x..:..:...----------.:.:.x::..x.x:x.x.-----------..........x.x.xx::....x.-----.::x::....x:x...x:..:-------.x.-----...x..:.:x..-----....x..x.......:x...:.-.xx..xx:.x:..xx.:..x:.x..x.x..x..----------.x:..x..x:..x.:.x..----.....-------x...:...:.:-----...xx..x....:------....---------::x.....:.:...---...xx..xx...----......-.::..:x.xx..-------------...x...x:.x.xx:....x.x:.:----...x.:::.x.x.:x.x....::x.x..:x....-----.x.::x.xx....:.x..x...x:....-----------....:x...-------------x..:.:.:...--.....---.x.x:..x....:xxx:.:..-----------------.x......-----------...x...:..:x...----:..xx...------------------------........x..x:x.:.:..:x....:x...--.x.x......:.---.....x...--..:......------------...:.:x..xx..:.::..xx.x.x..x..xx.------------------..x.......--:.:x.:...x------------------...:x....:x.:...xxx.:.:x..:......xx-.x..:x......----:...xx:.x:..:..:..:xx..:..x..:.xx..---....x....xxx.:.-.....:.x.:xx.:x..x:..--.:..:x:x..:.:..:...:..-.....x....:..---..:x.........xxx.::x......-...xx....::...x..:.:.......:...-........:.x.x.-.....x.:...............--..............................................:................:.....:.........-.x.:.:::::.::.:.....xx:.:...-----..........----xx...:.x.......x:.....xx...-..........x:.x:...:x:::x...:--------...x...xx...:xx:x:...x...-:x..:...xx.x...xx..x..-------------.....x...:....:------.:......-----.:...xx....-........:x.x.-:x.:..:x........ 27M3D24M2I27M3D44M3D25M13D108M1I38M2I10M1I17M3I25M5D5M3I20M10D18M11I24M5D21M7D3M5D12M5D22M1D33M10I19M4D5M7D11M5D13M6I4M9I14M3I12M4I6M1I12M13D25M4D34M5I28M11D9M13D11M2I5M3D21M17D8M11D15M4D8M24D31M2I12M3D9M2I9M12I33M18I10M2I10M18I35M1D12M4D35M3I15M1I21M2I22M1I13M3D26M1I31M1I14M1I23M2I79M1D28M5I10M4I27M1I28M8I25M1D22M13I15M6D8M5D11M1D13M1I16M 951/1406 67.6% 1567/94230402 0.0% 362/1406 25.7% 84933879 NA +13386 chr4 + 190214555 156810820 156810819 156811032 213 CTGAAA-GTGGTACTTACTGGCATGACAATGTTGTAGTGGATGCAGAACCCTGGTTCAGAAGGAAAATATTCATCAGATACAAATCTTATCCTAATTTGATTTCCTTTAGAAATCTGTTTTCCTGGTACAGTACCAGAACCACACCAGCGCCCTAATATAGTTCCATCACTGGGTTCCTCAACTTCTACAAAATCATACCT--GCAAAAAGACAAA chr4 - 94230402 71875392 71875391 71875607 22354796 22354795 22355011 216 CTGAAACATGTTACTTACTGGCACAAGAAGTGTATAATGGATGCAGAATCCAGGTTGAGAAGGAAAATATTCATCAGACACAAATCTTATTCTGATCTGGTTTCCTTTGGAGATTTGTCTACTTGGCACACTACTGGAACCACACCAGCGCCCTAAAACAGTGCCATCACTAGGTTCTTCAACTTCTACAAAGTCATACCTGAGCAGAAAAGAAAA ......-:..x............::.x..xxx.:..:...........:..x....x.....................:...........:..:..:..:........:..:..:...:.x.:...:...x...::....................x.:...x........:.....:..............:........--...:...::x... 6M1I194M2I13M 175/213 82.2% 216/94230402 0.0% 3/213 1.4% 84935428 NA +3193 chr4 + 190214555 156824237 156824236 156824370 134 TCTGTGGGAGTAACTGTCCTGAATTTAACCCGT-------CTAGAACAATG-TAAGCATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATACACACATATATACACA chr4 - 94230402 4481620 4481619 4481752 89748651 89748650 89748783 133 TCTCTGAGAATAACTCCCTTGAATTTGTTACATGAGTGTCCGATAAAAATGACAGGGAC---------TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ...x..:..:.....x:.:.......:x:x.:.-------.x.x..x....-:.:.x.:---------.:...:.:.x.x:.....x:.:.:.:...:.:....x...:.....:x....:.:x:xx...:....:...... 33M7I11M1I7M9D74M 82/125 65.6% 133/94230402 0.0% 17/125 13.6% 152342617 37871938 +3308 chr4 + 190214555 156824279 156824278 156824402 124 TGTAAGCATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATACACACATATATACACACACATACATACATACACACACATATATATACA chr4 - 94230402 73121092 73121091 73121213 21109190 21109189 21109311 122 TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCA--CAGAGACACACATGTATAAGCA .....x.x::.:.::..::....x:...:.:.....:.:.x.x::..:x::...:..::.:.x::....:x:....::::x:..:...:.x.:..::x..--..x.x........:....x:.. 100M2D22M 71/122 58.2% 122/94230402 0.0% 2/122 1.6% 83703187 NA +3234 chr4 + 190214555 156824279 156824278 156824354 76 TGTAAGCATATATATATATATATATATATATATATATATATAT--ATATATACACACACACACACACACACACATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....x.::.::...x.:..:...x..:....:...::x..:..--...:.:.............x.....x.::x... 43M2I33M 54/76 71.1% 78/94230402 0.0% 2/76 2.6% 148428486 41786069 +3291 chr4 + 190214555 156824279 156824278 156824349 71 TGTAAGCATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:::..:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 141859465 48355090 +3003 chr4 + 190214555 156824285 156824284 156824358 74 CATATATATATATATATATATATATATATATATATATATATATACA----CACACACACACACACACACATATACACA chr4 - 94230402 54293151 54293150 54293228 39937175 39937174 39937252 78 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..x..::.:..x...:.......:...:.:...:xxx:...:..x.----:......x...::...........:.:. 46M4I28M 52/74 70.3% 78/94230402 0.0% 4/74 5.4% 102531134 87683421 +3601 chr4 + 190214555 156824285 156824284 156824363 79 CATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATACACACATAT chr4 - 94230402 8395787 8395786 8395865 85834538 85834537 85834616 79 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.:.:...:.:.::...x.:..:...x..:....:...::x:...:xx.:.............:.:.x.....x.. 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 148428498 41786057 +3093 chr4 + 190214555 156824286 156824285 156824350 65 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............ 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 141859467 48355088 +3389 chr4 + 190214555 156824293 156824292 156824371 79 TATATATATATATATATATATATATATATATATATACACACACACACACA-CACACACATATACACACATATATACACAC chr4 - 94230402 88147180 88147179 88147259 6083144 6083143 6083223 80 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACAC ..:..:..x:x..............:.x.:.:...:.:............-..:.:.:.x:x.x.x:.......xx.... 50M1I29M 57/79 72.2% 80/94230402 0.0% 1/79 1.3% 68677113 NA +3202 chr4 + 190214555 156824297 156824296 156824363 67 TATATATATATATATATATATATATATATATACACACACACACACACACACACATATACACACATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:......:......x.:.....::x...::::.x..:......:......::... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 108657259 81557296 +3432 chr4 + 190214555 156824314 156824313 156824396 83 ATATATATATATATACACACACACACACACACACACATATACACACATATATACACACACATACATACATACACACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.:..:.x...:::.:x:...:.::...:.x:....xx...........:...:...x.....x.::x... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 148428526 41786029 +3706 chr4 + 190214555 156824315 156824314 156824437 123 TATATATATATATACACACACACACACACACACACATATACACACATATATACACACACATACATACATACACACACATATATATACACACATATATACACACACACATATATATACACGTTT chr4 - 94230402 73121102 73121101 73121218 21109185 21109184 21109301 117 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAG------ACACACATGTATAAGCAAATTT .:.::..::....x..:.....:.:.....x.x:...:x::...:.::....x::....:x::...::.:x::...:...x...::.x....x.x------........:....x:..x:... 95M6D22M 73/117 62.4% 117/94230402 0.0% 6/117 5.1% 83703213 NA +3311 chr4 + 190214555 156824316 156824315 156824380 65 ATATATATATATACACACACACACACACACACACATATACACACATATATACACACACATACATA chr4 - 94230402 66904847 66904846 66904911 27325492 27325491 27325556 65 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA ......:..::..........:...........:..x..x::x..x:.:..:...xx.....::. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 89919469 NA +3186 chr4 + 190214555 156824328 156824327 156824395 68 ACACACACACACACACACACACATATACACACATATATACACACACATACATACATACACACACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:...x.::..:...x.:::.:...:....:...:......x...:....x...::..:...:.x:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 149227915 40986640 +3171 chr4 + 190214555 156824368 156824367 156824431 64 ACACACATACATACATACACACACATATATATACACACATATATACACACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.:...:.x...:.x.:.......:..:.:x.::.x.:....x.....::........... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 139303619 50910936 +3003 chr4 + 190214555 156826134 156826133 156826223 90 GGATTACAGTCATGAGCCACCATATCCAGCTTTGAGTTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCA chr4 - 94230402 75688219 75688218 75688308 18542095 18542094 18542184 90 GGTTAACAATTACTCACCGACCTTTACAAATTTGAGCTATATTTTTTCTTTTGTCCTTTTTATTATTTTTTTTACTGGTATGATATTCCA ..x.x...:.:.:xx:..:x.x.x.x..:x......:.:x.......:....x.::.....x..x........x:..:x...:x:..:.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 81137915 NA +3079 chr4 + 190214555 156831982 156831981 156832066 85 TTATTACACACACCCCATCCTATAAACTGTTACTTCAAATAGTTTTCTCTTTTAAAATTTTTTTTCTAGTTTCTCTCTTAATATG chr4 - 94230402 46214222 46214221 46214306 48016097 48016096 48016181 85 TTGTGTCACACAGTAAATCTATTGAGCTGTTATTTCTAATACTTTTTTTGTTAAGGATCATTTCTCATATTTCTCTCTTTATATG ..:.xx......x:xx...:xx.:.:......:...x....x....:.:x..x.::..:x...:..xx:..........x..... 85M 57/85 67.1% 85/94230402 0.0% 0/85 0.0% 110617760 79596795 +8241 chr4 + 190214555 156834330 156834329 156834711 382 TTTTTCTCAAAGTA-CACTAAGATAA-------CATACAATGCAGGCCTCATTTCCACTGAGATTAACCCCAATACCTCAGCAAAAACAGTGCCTACCACAATCCCATGAAATAATTTTAGAAGCAATAAATTATGACTGGTTCCATTTACACAAATATTTTGATATCATGAAC-TAGCTTGC-TTATTCAAAGTGACAGACTGAGATGGAGAGCTACAGATAGAAAGGTCAAGAAGTAGACGATGTTTTTGAAGTTAGTGCATGG-GGTTTCTGGTGAGATTTCTGGTGAGAAAGGAGTAGGGGGTTAAATCAGCTGCCATATGGGGAGACGATCTATGTCTCTCAGCAGACAGAAAGAAAAGCTTACTTGAGATTTGAAAATTTATTCAAA chr4 - 94230402 71884122 71884121 71884484 22345919 22345918 22346281 363 TTTTTCCCAGAGCATCCCAAAGACAAGTAAGACCTTGCAATGCTACACTCATTTGCAGAGGAAATTACTT---TATTCCACTGGAAACAGAGCCAGCTATGGTAACATGAAACAATTTTAGAAGCAATAAACTAGGATTAGGATTGTTTACAGAACTATTTTGATACTGTGGACACAGTTTACTTTATTCAAACAGCTTGCTTGAGATTGAAAGGACCAAAAAGGAATATTAAGGAGCCTAAAATGCTTTCTAAATCAATGAGTGATAGTCTCTGGT----------GTGAAGAAAGAGCAAGGGATTATGTCAGATACCCACTCAGTAG-CAATCAC--TCTCCTAGCA--------------CTCATCAGAGCTGTGAAAATTGATTTTAA ......:..:..:.-.x.x....:..-------.x.:......x:xx.......x..xx.::.x.x..::---..:::..x:::......x...x:.:.:::.xx.......:..................:..x..:.:.xx:::......x..x..........:::..:..-:..:..:.-.........xx.x:x.x:......x..:..xxx..:.x..:..x:.:...:..:xx.x:...:...:x..:.:.:..x:..:-:..:......----------....::..:...:.:...:...x:....x.:..xxx.x:.x..-.:...xx--....::....--------------..:.::x...x.x........x...:x.. 14M1I11M7I37M3D101M1I8M1I82M1I10M10D43M1D7M2D10M14D29M 231/352 65.6% 363/94230402 0.0% 41/352 11.6% 84950208 NA +15338 chr4 + 190214555 156850195 156850194 156850444 250 TTGGGATTTCAAGTATGA-TCACTTACTTGCATATGTCATCTTCTGGGTCTTCAAGCCCAAATCTTTCATCAAACGTAAGTTGTATCCATACATTTTCCTCTACTGCTACTAATCTCCATACCAAGACCGTATTTCTTGGATAAGTATGAGGAAACCTTGGGCTGTGAATACTTCCATTAGTAGACACAGTAATAATTCTCTCATGCTGAGGATCTTGTACTCCTAAAGCAAAAAACATAGACATAGACAT chr4 - 94230402 71892649 71892648 71892899 22337504 22337503 22337754 251 TTGTAAGTTAAAGCAAAAGTAACTTACTTGCAAATATCATCTTCTGGGTCCTCAAGCCCAAATCTTTCATCAAAAGTAAGTTGTATCCATACATTTTCATCTACTGCTACTAATCTCCACACCAGTACAGTATTGCGTGGGTATGTGTGTGGAAACTTGGGGCTGTGAATACTTCCATTAGAAGTCACAGTTATTATTTTCTCATGCTGAGGATCCTGCACACCTGTAGTAAAGAGAGAAAACAGACGCAT ...x:.x..x...:.x:.-.x...........x..:..............:.......................x.......................x....................:....:x..x.....x.x...:..x..:..x......:.x......................x..x......x..x...:................:..:..x...:x..:...:.:x:x.:...x.x:... 18M1I232M 205/250 82.0% 251/94230402 0.0% 1/250 0.4% 84957546 NA +3299 chr4 + 190214555 156871999 156871998 156872136 138 ATTTTAAGGAAAACAAATTAATAAACTAAAGAGCAAACAACAACAACAAAAGAAAACC-----------TCTTAATAAAAGACTATACACAATGGAAGACGACTAAAAC--TCTTATTTACCATGATGGATTAAAAATATCAGC-TTTGCAC chr4 - 94230402 16619842 16619841 16619993 77610410 77610409 77610561 152 ATTTCCAGGAGCTCAAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCTGTAGAGTTTCCTCAATAAAGAGCTTGAAAATATAGCAGATTTGTAAAATCATTTCATTCATTTAGTACCACTTAATACATCAGCATGTGCAC ....:x....:xx.....x..x...x:...:.:..................:....x.-----------:..:......:::..xx.x.xx..:.x...:xxx.....:--.:.:...:.::xx.xxxx.:.x..x.:......-.x..... 58M11I40M2I33M1I7M 92/138 66.7% 152/94230402 0.0% 14/138 10.1% 140252157 49962398 +3036 chr4 + 190214555 156872007 156872006 156872058 52 GAAAACAAATTAATAAACTAAAGAGCAAACAACAACAACAAAAGAAAACCTC chr4 - 94230402 20093816 20093815 20093867 74136536 74136535 74136587 52 GAAAACAAACAAACAAACAAAAAACCCAACAACAATAACAACAAAAAACCCC .........:x..:....x...:.x.x........:.....x.:......:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 136778191 53436364 +3068 chr4 + 190214555 156885115 156885114 156885181 67 ATATGGGGAGAAAAATATACTTGTGCATGTATGTGCATACATACACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:..x.x.x...x..:..:..::::.......:x:.:.:xx.:.................x..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 148489319 41725236 +3135 chr4 + 190214555 156885116 156885115 156885183 68 TATGGGGAGAAAAATATACTTGTGCATGTATGTGCATACATACACACACACACACACACACACACACA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....x.x:x.x...:..::x.x.:...:.:.:...x.....xx.:.................x..... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 148489321 41725234 +3328 chr4 + 190214555 156885118 156885117 156885185 68 TGGGGAGAAAAATATACTTGTGCATGTA----TGTGCATACATACACACACACACACACACACACACACACT chr4 - 94230402 14964814 14964813 14964885 79265518 79265517 79265589 72 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACT ..x...x.x......::...:.::..:.----...:::..:.....xx........::.............. 28M4I40M 51/68 75.0% 72/94230402 0.0% 4/68 5.9% 141920304 48294251 +3054 chr4 + 190214555 156900941 156900940 156901027 87 GAGGGAGGAAGTGAGGGAGGGAGGAAGAAAAAAAGAGAAGAGGGCAGAGAAGTGAGTGTACAAAAGAGAGAATGCAAAAGATGAAAC chr4 - 94230402 7739260 7739259 7739346 86491057 86491056 86491143 87 GAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAAC ......::..xx.....:...:....:......::.::...:::::x..:..x.::xx.x::...:.:.:..x:x....:x...... 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 149161681 41052874 +8576 chr4 + 190214555 156942070 156942069 156942265 196 CACTCTTGAGCACGT--AGCCCTGTGGTCTGCCTAAAGACGAGAGGGAAAACCCCTTGTTGACCATAAAAGGGCCGCCTGCATGTTCTCA-GTGGAGAGCATACAGGATCGTATTTACACAAGTATAAATACATGCCATTCCTTTGTGCTCACAGGCGCTCCAGAAGGCTGGCCAGGGGAGGAGGGTCCAAGAGCTCAA chr4 - 94230402 71938653 71938652 71938850 22291553 22291552 22291750 198 CACGCTTGGAAATGTGCAGTTCTCTGG-CAGCTCACAGGCAGAGGAAAACACCCCTTCCCAACCATAAAAGGGCTGAGAGCATGTTCTCAAGCGGAAAATGTGCAGGACCTTATTTACAAATGTATAAATACATGCCATTCCTTTGCGCTCACAGGCACAGCTGAAAGCGAGCCAGAAAAGGAAGTACCAGCAACTCAA ...x....::x.:..--..::..x...-.x..::.x..:.::::.::..x.......x:::.............:.xxx...........-.:...:.:::.:.....:.x........x.x........................:..........:.xx.x...:..x:.....:::....:.xx...:x.:..... 15M2I10M1D62M1I108M 140/195 71.8% 198/94230402 0.0% 4/195 2.1% 85003417 NA +3000 chr4 + 190214555 156945309 156945308 156945369 61 AATTATATATATGTGTATATATACATATACATACATATATATATATATATATATATATATA chr4 - 94230402 88029580 88029579 88029640 6200763 6200762 6200823 61 AGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATA .::.....x.......:x.x.....:.x.........x...:.:......::.:.x.x... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 68915729 NA +3090 chr4 + 190214555 156945315 156945314 156945379 65 ATATATGTGTATATATACATATACATACATATATATATATATATATATATATATATATATATATA chr4 - 94230402 52481243 52481242 52481307 41749096 41749095 41749160 65 ATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA .....x.:...:..:..::.........::.:...:xx.....x.:x.....:.:.:.x...... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 104464072 85750483 +20916 chr4 + 190214555 156959004 156959003 156959682 679 AGCCAGAACAATTATTTTACAATTAGTTTAGACATGTCTGAGCCCAGAAGGAAAATTTCTATTTCAATCATCTTATTTTCCTT----------------------------------------------------GAAAAGAACCTAATGATACCAGAAATCAGATCAATTCAATCTTCATACCTGAGTTTCTAGCCATTT-TTCAAAGTTGAA--------AAGCTTTATAAATGCAATTGCCCAGAATTTTAGGTATGCTTTCCAAGTGCAATACAAAATAGCAATAATGGATTTCCACGCACTAAACGAAAACAAACAAATAAACAAAAAATAAGCTTGCAACCTCATTCTCAAGGTAGAACATGGTCACCAT-CCTATAAAACATAATACACACCCCTAAATTTGGACTGCAAATCTATCACTTAAACATCTAGTAAATGACCCAATTTGTTTACATGGCCCTGTAGCTTTTTATGGCCTTTCCATAAAGAAGTTATTACATCCATTCCCTTTATTTTGTTTAAGAGTGTTTGAATGAGCCCCAGAACCACAGGCTAGTTAAACAAGCCTTCCTTAGATGGACGTGGTCTCATATAATTCACCACTACCGGGGAAATTTTCAGAACAATGTTTGTAGTTTTGAAACACCACACATTCCTACATACCAAAAGTATTTCCAGTGCTTTATGCAGTTTT-AAATGTTCGGCAGATACATTAAATAAGTCCTATTTTTCCAT chr4 - 94230402 71953313 71953312 71953988 22276415 22276414 22277090 676 AGCCAAAACGGTTGCTTTGTAATTAGTTCAGGCATGTTTAAATCCAGAAGGGAAA---CAGTTTTAAT----TTATTTTCCCCTGGAACACTACGAAGTTCCACTACAGCTTTACAGTGTAACCACGCGTATCAAGAAAGAGCCTTCATTTACCCAGAAAAAGGATCAAATTATACTATTGAATTGTTCTTCTATTTCTCTGCTCCACTCTGAATGCACTGAAATATTTGAAAATACTGTTCCTGAGAATTT------------------GTCATCTATAGTGTCAA----AGACATCTTGGCAGAAAAAGAAAG--------------------------------TCTTGTTGAGGGCAAAATTTAGTCAAGATGACTGTAAAACTTAATCCACACCTTCGAATTTGGACTGAATATCCATCGCTTAAACATCTTGTAAATGACCCAATTTGTTTACATGGCCCTGTAGATTTTTATGACTTTTCCATAAAGAAGTTATTGCATCCATTCCTTTTATTTTGTTTGAGAGCATTTGAATAAGCCTCAGAACCACAAGCAAGTGAAACAGACTCTCTGCAGATGGAAGTGGCCTCGTATAATTCACCACTACCGGTAGAAGAGTCAGAACAACACTTTCAGTTTGGAAATACC-----TTCACACACAGCAGAATAATTTCCTATGCCATATGTCTTCTTAAAATGTTTAACTATTGTATAAAATGAGTTCTGGTTTCCTGT .....:...::..::...::........:..:.....:.:.::........:...---.x:...:...----.........::----------------------------------------------------....:::x.:.x..xxxx.......xx:......x.:.xx..x:xx.x:..xx:.....x::x.:.-:..x.xx:....--------..xx...:x....:.x:..x.:x.......------------------.:x..x:.x.:.:x...----:..:x..:xx...xx...x....:--------------------------------..x.x:.x.:..:.:..:x.:....xx..-x..:......x....x......::::...........x.x...:...:...........x..................................x........:.:...................:..........:............:....::.......:....:..........:..x...x.....::.::..:x:.......x....:...:...................x::..xxx.........:::..x:.....x....:...-----...x:...:.x..:..xx......x:...:x....:xx.:..-.......:::.x:x.::..x....:...:..:x...:.::. 55M3D10M4D11M52I66M1I12M8I30M18D17M4D24M32D29M1I276M5D42M1I41M 438/613 71.5% 676/94230402 0.0% 129/613 21.0% 85005691 NA +21413 chr4 + 190214555 156969255 156969254 156970182 928 GTCTGATGTGTTTCCTGCACGGGTACAGCTGGTGCTGTGGCTCCTTTGATCACTTTCCCCCAGACCTCTGCAGCTACTGTGATTAGAGATACATCCCTAGGCTGCCCTTTGATCAGCAGCTCAAGGAGCCTGCAGGTGCCATGTGGCATCACATTAGCAAGTTGTAAGAA---GCACCACACTAATATTAGCTGATAAATGTGATACTATGTCTTGCTGCGCAACA--------GCAAATACAAATAACGTTTGCAAAAGTCGGCAGAATCCTTATTTTATCTACTTTT-------ATACCCTAAAACTTTCTGTGCTTTCTTAAACATGAACACTTCATAGAGTTT-AAATTCAAAGTTGA------------AGTCTTGAAACACCCCAATATGAAAAGGAAAAAAAATCACTCTGACTTAAAACTATAGCACATCCTATCTTAATTTTGTAGGTATGCCACTTGTGTTCATTTTGCATGGTTA---ATCAAGTGACAGAATCCTTGCATTCTGAATAGATGATATACAAAGCAGTAAAAACATGTATATTCCTTTTCAAA-----TTACAGTAAGAGCCACCATTT--GTAAACAGGGCGTTAAATATTCCAATTTTAGACAGCCTAACATGAACATTGTGGTTTCATGTGCAGTATAAAATTTCTATTTACAAAGTATTCTCAAAAATGACTTCATAATGGTAGATGAAGAGAAAAAGAGTTTAGAAAT-TGAATGATGTAAATCATATGG-GTTCAGAGGCTAAGCAAATTACACACCCTGAAGCTGCCCTGGCTTTATGAAAGGAGCCTTTCTCCAGCTCTGTGCAATCCCAGCCCAAGGGAACTTGCATCTGAGAGTTTTCTAAACATTTCAGGTACACTTGAAAGCTGAAAGTAATTCTCATTTCCTATGCAGGATTAAGTCGTTTCCAGCACACACAAAATAGCAGTCATTCACCAACACAT chr4 - 94230402 71959687 71959686 71960549 22269854 22269853 22270716 863 GTCTGATTGGTTTCCTGTCAAAG--CAGTGGGTCCCGGGG-TCTTTTGATCACTTTCCTCCGGCCCTCCACAACTGCTCTGATTAGAGATTGATCCCTGCGCTGCACTTTGATCAGCAGTGCTGGCAGCCCGCAGGTGCCATACATCATCACATTAGCGGGCCACAGCAGTGTGCATCACTC---------------------ATGCTGTGCTCGCCAGCACTTTATGGATCCTGCCAGCGCACAGAATGCTTGCTGAG---------CTCCCCATCTTTTCTTCCTATTAGAGAGATGACGTAGAATTCT------TTTCTCAGG--------------GGAGTCCCAAGTTCAAAGCTGACAAAATTGCATTAGTCTTGAAACTGC---ATTT---------------TTGCCCTATTTCA---TTACAGCACG------CAGGAGTTTGAGAGCTCCCAGCTT---CTCCTTTTGCGCCGCTCTGTGCCCAGGCATAGAGCTCGTTC--------CAGCTGCCATGCAAAG-------GACTTATTTTCCCCCTTTCCCCCCTCCTTACATTAAGCACCACGGTTTCTGTAAGCACA-TGCTAATGGCCCAAACTTCAGA-----TACTGTGTACCAAGCAGTTTCATGCAGCACATATCGCATCAGCTTGCAAAATACCCTTTTAAATGACTTTACAACAGCAGATCGAGAGGAAAGGTGCTTAGAAATCTGAATAATGTAAATCATATGGAGTTCAGAGGCTAAGCAAATTACACACCCCGGAGCCGCCCGCGCTGAATGAAAGGAGCCTTTCTCCAGCCCCGCACAGCCCCGGCCCAGGGGGACTCCCGTCTGAGAGTTCTCCAAACACTTCAGGTACACATGAAAGTTGGAAGTAATTCCCGCTTCCTCCGCGGGATCAGCCCTCTTCCAGCCCGCCCCGCGCA----CCCCTCACCCACACAT .......xx........:xx::.--...:x...x.:.x..-..:..............:..:.x....::..:..:..x...........xx......:x.....x.............:x.x:.x....:...........:::x............::.::::.:x.:---...:...x.---------------------..:..:..:::xx.x..:.xx:.--------..x.:::..x.x..:.:....x:.:---------x...::..:..x...x.:.x.-------..:x.x..:..:.:.------.....:.::--------------:....::-..:.......:...------------...........xx.---..x.---------------.::.:..:x:.:.---:..:.....:------.xx:.x....x::.:x:x.x:...---:..x......::x.:.x---::.x..xx.:...:::.x.x.--------:..x..x:..:.....-------:..x.:.x.x::..:....xxx-----.....x....x:....x:...--....:..x:-:.:...xx:::.x..:..:...-----..x::..x..xxx.::........::xx::...xx::x..x::..:....:..::..:xx.........:.:..::.:....x:....:...:.x.:........-.....:...............-............................:.:...:....xx...xx......................:.:.::..::...:.....:...:...:x.:..........:..:.....:...........x......:..:.........:.::.....x:..:....:.:x:.x:.......x.:.x.x:x::.----:.x:.....x...... 23M2D15M1D129M3I9M21D23M8I25M9D21M7I15M6D9M14D7M1I14M12I14M3D4M15D13M3D10M6D24M3D17M3I21M8D16M7D22M5I21M2I9M1D22M5D105M1I21M1I195M4D16M 559/820 68.2% 863/94230402 0.0% 151/820 18.4% 85009568 NA +12290 chr4 + 190214555 156970782 156970781 156971049 268 TCACCGTTCTGTTCCTTGTTGCTGGAAAACTGGAATTTACTACTCAGGTTGGATTCCGCCTGAGTCCCCTGTCTCTGGCCGGCCAGGGCAGATGTCAGCAGGAGAAGCCCGAAGAGGCTCATTTGGCTGACTGGGGTGAGAGCTCACTCACGGCGGGCACTTTGGAAGCAG---CGACTCCCGAGTCTCTTTCACCACCGCCAGGGGAAGGCTGCACTGGGGTGGAAGCGCCGAGCCTGCTCTGGCAGCAGAGAATCGCAGGGTAGTTTCC chr4 - 94230402 71960616 71960615 71960874 22269529 22269528 22269787 259 TTACCGTTCTGCTCCTTAGCGCCGGGGAAGGAGAACTTGCTGCTGAGGTCGGACTCCGCGGCGGCCCCATGCCTCCGGCCGGCCAGGGCGGATGTCAGCAGGAGCAGCCCGAGGAGGAGCATTGGGCCGGCGGGGCGAGGGGCTGCGGCGGAGCAGGCGCTGGCGGAGCGGCACCGAGGCCCGGGCGTCTCTCAGCGCCGCCAGGGGA-----GCA-------GGCAGCACTGAGCCTGCTCTGGCAGCGGAGAATTGCAGGGTAGTTTCC .:.........:.....:x:..:..::..xx:...:..:..:..x....:...:.....xxx:.:...x..:...:.............:..............x.......:....xx....x...:.:.x...xx::.:...xxxx.:x:..:...:..xxx.:...:.---...xx....:.:x...:...x.:...........-----...-------..x...:.:.................:......:.............. 171M3I34M5D3M7D48M 190/256 74.2% 259/94230402 0.0% 15/256 5.9% 85010166 NA +3330 chr4 + 190214555 156980001 156980000 156980067 67 GCCTCTGGGTTCAAGTGTTTCTCATGTCTCAGCCACTGGAGTAACTGGGATTACAGGCCTGTGCCAC chr4 - 94230402 18197138 18197137 18197202 76033201 76033200 76033265 65 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..............:...x..x.x.......x:.x:....:....:.:....--.x..::.... 55M2D10M 50/65 76.9% 65/94230402 0.0% 2/65 3.1% 138782863 51431692 +3416 chr4 + 190214555 156985399 156985398 156985468 70 CTCCTGGATTCAAGTGAATCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGTCTGCGCCACCACG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:....:........xx..x.xx.x........::.............:....x.--...:....:::. 56M2D12M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 138788260 51426295 +3436 chr4 + 190214555 157033427 157033426 157033511 85 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATTTCATCATTTATCAGACCTCATTTTTTTTTTCACGCAGTAGTCA chr4 - 94230402 69437739 69437738 69437816 24792587 24792586 24792664 78 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAA-------TTCTGTTCTTTCTCACACTGTTTTCA .........x........:x...................x..x...x.x.x.-------.:x.x..:...:....:.x..xx... 52M7D26M 61/78 78.2% 78/94230402 0.0% 7/78 9.0% 87595688 NA +3339 chr4 + 190214555 157053212 157053211 157053301 90 TTAAAGTATAATTTAAAAAAAAAAAACTAAAAAAAAAAACAAAATAAAAAACTAAAAAAAAAAAGAGAGAGAGAAAAAAAGAAAAATTAG chr4 - 94230402 69673912 69673911 69673994 24556409 24556408 24556491 83 TTAAGATGTAATAGTGGAAAAAAAAAT-------GGAAATGAAATCAGGAACTAAAAAAAAAAAAAGAGAGGGAGAGAAAACCAAAACAG ....::.:....xxx::.........:-------::...::....x.::...............:......:..:.:...:xx...x:.. 27M7D56M 58/83 69.9% 83/94230402 0.0% 7/83 8.4% 87379300 NA +3278 chr4 + 190214555 157082889 157082888 157083078 190 GAGGAAGAACATAGCTTAGCAGAGCACATTTGGGAAAAATATTACATAATAATTATCAGACAAATGAATA--------GTGTT------TTATATATATATATATATATATATATACACACATACTTACAATTTAGTATTTTAAGAAAGACATTCTTAAAATTAACACATTCTTAACATAAAATTAGTAAAATAAGAACTATTT chr4 - 94230402 45203468 45203467 45203661 49026742 49026741 49026935 194 GAGGGAAAACACAGAGCAATAAAG--------AGAAAAATATCAAATAATACTT--CACATGCTTCACCACTCTTCCTGTGTTCTCCTTTTATATATATACACAAATATGTATCTACAAATATTTTTGAAGAATTATAGTCAAACGAAAACATTTTTAAAAAGGGCACACAGTCATAATGGCAAAATCAAGATGAAAGTTTTTT ....:.:....:..xx:.::.:..--------:.........:.x......x..--..x.::xx.x.x:.--------.....------...........:.:.x....:...x....x.:..x:..:x.:xx.x:..x.:x..x:..:.....:......xx::....:xx.:.xx..::x.xx.x:..:..:.:.::.x... 24M8D22M2D14M8I5M6I115M 113/180 62.8% 194/94230402 0.0% 24/180 13.3% 111879421 78335134 +3439 chr4 + 190214555 157087330 157087329 157087405 76 TTTTGCTAATTGGCTGTATAACTTTCAATAAGTCACTTAATCTATCTGAGTCTCAGTTTTCTCATTTGTATAGTGA chr4 - 94230402 11947202 11947201 11947277 82283126 82283125 82283201 76 TTGTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGA ..x.x..x.:.::....:.:..:..x::.x.............::...x...:......:.:...x.:.:x.:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 145140128 45074427 +3054 chr4 + 190214555 157114313 157114312 157114353 41 GTGTCTTTCCTGGTCTCTCTCTCTCTTTCTTTTTTTTTTTT chr4 - 94230402 4658094 4658093 4658134 89572269 89572268 89572309 41 GTGCCTTTACTGTTCTCTCTCTCTCTTTTTTTTTTTTTTCT ...:....x...x...............:..........:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 152456219 37758336 +6432 chr4 + 190214555 157136459 157136458 157136721 263 TTTTCTTCAGGACTATAGAGTTAACATCTTCCTGAGACAAAAATGGAATGACCCCAGGCTGA---------AGCTCCCCAGTGATTTTAGGGGTTCAGATGCACTGACAGTGGATCCAACAATGTACAAGTGTTTATGGAAACCTGATTTATTTTTTGCAAATGAAAAAAGTGCCAATTTTCATGATGTGACCCAGGAAAACATCCTCCTCTTTATTTTTCGTGATGGAGATGTCCTTGTCAGCATGAGGTACTCTTTTATATTTCATATTT chr4 - 94230402 48890871 48890870 48891127 45339276 45339275 45339532 257 TTTCATTCAGGATTACCGAGTGAACATCTTTCTCCGTCAGAATTGGAACGATCCACGTCTTGCATATAGTGAATATCCAGATGACTCTTTAGACTTAGATCCATCCATGCTGGATTCAA---------------TTTGGAAACCAGATTTGTTCTTTGCTAATGAAAAAGGTGCCAACTTTCATGAAGTTACAACGGATAATAAGTTGTTGAGAATTTTCAAAAATGGAAATGTACTTTATTCCATCAGGTGAGTTTCTAATTGTGATTTTT ...:x.......:..:x....x........:..xx.x..:..x.....:..:..xx.x..x:---------.::x:..x::...:.:.xx:.::.:....x..::x.::x.....:...---------------.x........x.....:..:.....x.........:.......:........x..x..xxx...x..:.xx:.x:.xxxx.....:x:x:.....:....x...xx:xx...x....:xx:..:..xx.x.x..x... 62M9I48M15D138M 160/248 64.5% 257/94230402 0.0% 24/248 9.7% 108245588 81968967 +3999 chr4 + 190214555 157143842 157143841 157143964 123 AGGAGGCAGGTCGGCTTTTACATGATGGGGGTCTACGCCCCAACTCTGCTCATTGTTGTTCTCTCCTGGCTTTCCTTCTGGATCAACCCGGACGCGAGTGCTGCCAGAGTGCCCCTGGGTAAG chr4 - 94230402 83489636 83489635 83489758 10740645 10740644 10740767 123 AAGAGGAACATTGGTTACTTCATCCTGCAGACTTACATGCCATCTATCCTCATCACCATTCTGTCCTGGGTGTCTTTTTGGATCAATTACGATGCTTCTGCTGCACGAGTGGCACTGGGTAGG .:....x.x:.:..:.x:.x...xx..x:.:::...::x...x..x.x.....:::::....x......x.x..:..:........::xx..:..xxx......xx.....x.x.......:. 123M 78/123 63.4% 123/94230402 0.0% 0/123 0.0% 73654206 NA +3047 chr4 + 190214555 157149832 157149831 157149877 46 TCTTTTCCTTTCTTTCTTCCTCTCTTTTCTTTCCTTATTTTTTCTT chr4 - 94230402 60688300 60688299 60688345 33542058 33542057 33542103 46 TCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCCTT ......::...:...:..........:.......:::..:..:... 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 96461532 93753023 +3016 chr4 + 190214555 157203368 157203367 157203420 53 TGTGTTTTTTTTGTTTGTTTGTTTGTTTTAGAACAACGTGCTTATACCAGAGG chr4 - 94230402 50961202 50961201 50961254 43269149 43269148 43269201 53 TGTTTCTGTTTTGTTTGTTTGTTTGTTTTTGAACATCATGTTTGTATTTGAAG ...x.:.x.....................x.....x.:..:..:..::x..:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 106242166 83972389 +3006 chr4 + 190214555 157228763 157228762 157228827 65 AGCCTTGGAGATGGCAAGATTCCATCTCAAAAAAAAAAAAAAAAAAAAGAAGGAAAAAAGAATGA chr4 - 94230402 44177668 44177667 44177732 50052671 50052670 50052735 65 AGCTTTTAGAATGGAATATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGA ...:..x:::....x.x:x.....x..:...............:......::x.....x.x.x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 113051095 77163460 +3030 chr4 + 190214555 157228790 157228789 157228864 75 CAAAAAAAAAAAAAAAAAAAAGAAGGAAAAAAGAATGACCCCCCCACCTCCCCCCACCAAAAAAAAACCCAAAAG chr4 - 94230402 46888156 46888155 46888230 47342173 47342172 47342247 75 CAAAATAAAACAACAGGAAAAAAAAAAAAAACCAACCAGCCCCCCTCCCCCCAGGGAAAAAAAAAAAGCCAAAAG .....x....x..x.::....:..::.....xx..:x.x......x..:...xxx:xx.........x....... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 110340634 79873921 +3329 chr4 + 190214555 157231126 157231125 157231187 62 GCCTCTGGGTTCAAGCAGTTTTCCTGCGTCAGCCTCCCCAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:............::x..:x.xx.xx.......::.x.........:......x...... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 139033988 51180567 +3426 chr4 + 190214555 157237248 157237247 157237316 69 TATAAACATGAATTTTTACTTCATTGATTTGAAATGTATAAGTTTTTTTTTTTTTTTTTAATTTTGAAA chr4 - 94230402 67079745 67079744 67079798 27150605 27150604 27150658 54 TATAAACATGAATTTT---------------AAATGCATTACTTTTTTTTTTTTTTTTTAATCTTGAAA ................---------------.....:..x.x....................:...... 16M15D38M 50/54 92.6% 54/94230402 0.0% 15/54 27.8% 90157503 NA +3043 chr4 + 190214555 157240380 157240379 157240466 87 ATTTTTTCCACAAAAATTTTTGAAATATCTTGGAGTTTCTCATTTTTTTGTTTTTCTTGCACTGTGAACTTTATCTTACATTTTATT chr4 - 94230402 4033941 4033940 4034027 90196376 90196375 90196462 87 ATTCTTTTGAAAGGAAGCCTTGGAACATCTTTAAAATTCCGAGTTTTTACTTTTTCTTGTTCTGTGAACATGTTCTGAGATTTCTTT ...:...:x.x.::..x::...:..:.....x:.:x...:x.x.....xx.........:x........x.xx...x.x....:x.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 153206439 37008116 +3393 chr4 + 190214555 157248502 157248501 157248643 142 GGTTTCAGTGAGCCTATATATATATGTGTGTGTGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTGTATATATGTATATATATGTATATATACATGTATATATACGTATATATATACACCTGTA chr4 - 94230402 48089491 48089490 48089613 46140790 46140789 46140912 123 GACTTCTGTAAGTCTGTATATACACGTGTGTGTATG----TGAGAGTGTGTGTATATATAT-TACACA-----AAATAATAGTGTA-ACATTTAT-----TGCA---ATACATTTGAATGCACACATATCTGTAAAACTGTA .::...x..:..:..:......:.:........:..----..x.x................-...:::-----.x...xxx.....-.:..x...-----..:.---......x.:x..::..::....x.:..x.x..... 36M4D21M1D6M5D13M1D8M5D4M3D35M 91/123 74.0% 123/94230402 0.0% 19/123 15.4% 109159011 81055544 +3015 chr4 + 190214555 157248512 157248511 157248599 88 AGCCTATATATATATGTGTGTGTGTGTTTATGTGTGTGTGTGTATATATATATACGTGTGTATATATATACGTGTATATATGTATATA chr4 - 94230402 35554954 35554953 35555041 58675362 58675361 58675449 88 AGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x...x......x..x.........:x:..:..x....:.:.....::...:.x:x:...:..x.x..x.:x..x:.x..::.x.:. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 121693558 68520997 +3370 chr4 + 190214555 157248640 157248639 157248777 138 TGTATATATATACATACGTATATATTTATGCACGTGTCTATATACACGTGTATATATACACAAGTATATATATACACATATGTGTATATACACGTATGTATATATATATACCGACCATGGCAGAGAATTCCTTTCTTT chr4 - 94230402 73121104 73121103 73121226 21109177 21109176 21109299 123 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATAC----GTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA-----------AGCAAATTTCCTTATTT ..:..::....x.....::.....:x:.x:x:.:..xx..:....----.....x:.....:.......:.:x::......:x:..:::x...:x.x::.:.:..:....-----------..x:....:.:..x... 45M4D61M11D17M 78/123 63.4% 123/94230402 0.0% 15/123 12.2% 84127536 NA +4264 chr4 + 190214555 157256153 157256152 157256341 189 TATTACATATATATGTTATATATTATATATAATATATAACATATATTACATATATATGTTATATATAATATATAATATATAATATATATATATAATATATA--------AATTATATATT-ACAT----ATATATGTTATATATTACATATATTATATATAATATTATATATTACATATATATGTTTGTTATACAGTTATGA chr4 - 94230402 67910059 67910058 67910250 26320153 26320152 26320344 192 TATTACATATACA------ATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA----AAATATTTTATTAATGACACACTACATTACAGAACAATGCCTCAGACTCAGTGATGA ...........:.------...:..x.x...xxx...x.x...:..x.:.x......xx......xx...........:..:......:..:.:.x...x.--------:....x....:-....----...:..:.x.x.----.x....x....xx..:.:.:xx..:......x.xxx...::.xxx.:x....x.... 13M6D82M8I11M1I4M4I12M4D57M 126/179 70.4% 192/94230402 0.0% 23/179 12.8% 89346094 NA +3043 chr4 + 190214555 157277821 157277820 157277892 72 TATATGTATATATGTATATATATATGTATATATGTATATATATGTATATATGTATATATATGTATATATGTA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:...x.....x.::..:..:........:..::::.:...:xx.....x::x.....:...:.x...:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 104796585 85417970 +3037 chr4 + 190214555 157277852 157277851 157277926 75 ATGTATATATATGTATATATGTATATATATGTATATATGTATATATATATGTATATATGTATATATATGTATATA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ...:.:..x...............:.:....xxx:......x.xxx:..:::.:x:.:...:.:.:..:...... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 102984698 87229857 +12885 chr4 + 190214555 157303522 157303521 157303812 291 TTTTCCTTTCTATTTTTCCTATTCTTCT-----AGTCTGCTCCCAGTTTTCGAGAGGAGTCTATGCTATTTTTGGATTTTATGACAAGAAGTCTGTAAATACCATCACATCATTTTGCGGAACACTCCACGTCTCCTTCATCACTCCCAGCTTCCCAACAGATGGCACACATCCA-TTTGTCATTCAGATGAGACCCGACCTCAAAGGAGCTCTCCTTAGCTTGATTGAATACTATCAATGGGACAAGTTTGCATACCTCTATGACAGTGACAGAGGTAAGTGACAGTATCTCATCT chr4 - 94230402 78254546 78254545 78254841 15975562 15975561 15975857 296 TTTCAGTTTTTAATTCCCCTGTTTGTCTTTGTCAGTCTGCTCACAGTTTTCCAGAGGAGTTTATGCCATCTTTGGATTCTATGACCAGATGTCAATGAACACACTGACGTCGTTTTGTGGAGCCCTTCACACGTCCTTCATCACACCCAGCTTCCCAACAGAC-GCAGACGTGCAGTTTGTCATCCAGATGCGGCCTGCATTAAAAGGAGCCATCTTGAGTCTCTTGACCTATTACAAGTGGGAAAAGTTTGTGTACCTCTATGACACAGAACGGGGTAAGAACTGTTGTTTCATCT ...:xx...:..x..::...:..:x...-----.........x........x........:.....:..:........:......x...x...x:.:..:..xx.x..:..:.....:...:.x..:...::x...........x.................:-...x..:.x..-........:......x.:..:.xx:.x........:x..:.x..::.xx.x:xx..:..:x.:.....x.......::.............xx..xx.:......x:x::x.:.:...... 28M5I130M1D11M1I121M 211/290 72.8% 296/94230402 0.0% 7/290 2.4% 79048976 NA +3332 chr4 + 190214555 157315494 157315493 157315564 71 TTTATTAGGCTATGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTG----TTTTGTTTTGTTTTTGAC chr4 - 94230402 45158858 45158857 45158932 49071471 49071470 49071545 75 TTTTTGTGGTTGTGGGCTTTTTTTTGTTTGTTTGTTTGTTTTGGCTAGGATTGGCCTCTTTGTTTTTCTCTAGAC ...x.xx..:.:....:..........................x:.x.xx...----:........x:.:.x... 53M4I18M 55/71 77.5% 75/94230402 0.0% 4/71 5.6% 112156636 78057919 +3085 chr4 + 190214555 157315506 157315505 157315558 53 TGGGTTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT chr4 - 94230402 37093820 37093819 37093872 57136531 57136530 57136583 53 TGGGTGGTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTACAGTATTGTCTTGCT .....xx......x.....................x.x:x..x....:...:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 120221686 69992869 +4225 chr4 + 190214555 157321473 157321472 157321616 144 TGGAGGTGCAAATGTCTCTGGATTTCAGATAGTGGACTATGATGATTCGTTGGTATCTAAATTTATAGAAAGATGGTCAACACTGGAAGAAAAAGAATACCCTGGAGCTCACACAACAACAATTAAGGTTTGCTTTGGTTTCTG chr4 - 94230402 78307273 78307272 78307416 15922987 15922986 15923130 144 TGGAGGTGCCAATGTTACTGGATTCCAGATAGTTAATAATGAAAACCCAATGGTTCAGCAGTTTCTACAACGCTGGGTGAGGCTCGATGAAAGAGAATTCCCAGAAGCCAAAAACTCACCATTAAAGGTATTTATTTTATTCTG .........x.....:x.......:........x:.:x....x:.::.:x....x:xxx.:...x..x..x.x...x::.x:..x..x....:.....x...x.:...:x.x.xxx..x..x.x.....x.x:x..xxx..... 144M 93/144 64.6% 144/94230402 0.0% 0/144 0.0% 79014200 NA +8399 chr4 + 190214555 157332808 157332807 157332991 184 ATCCTTTGCAGTATACTTCTGCTCTGACCTATGATGCCGTTCAAGTGATGACTGAAGCCTTCCGCAACCTAAGGAAGCAAAGAATTGAAATCTCCCGAAGGGGGAATGCAGGAGACTGTCTGGCAAACCCAGCAGTGCCCTGGGGACAAGGTGTAGAAATAGAAAGGGCCCTCAAACAGGTCAG chr4 - 94230402 78310279 78310278 78310462 15919941 15919940 15920124 184 ATCAATTTTAGTATACATCTGCCCTGACCCATGATGCAGTCCTAGTCATAGCAGAGGCTTTCCGTTACCTCCGAAGGCAACGTGTGGATGTCTCCAGGAGAGGTAGTGCTGGGGACTGCCTGGCCAACCCTGCAGTACCATGGAGCCAAGGAATTGATATAGAAAGAGCGCTGAAAATGGTAAG ...xx..x:.......x.....:......:.......x..:.x...x..::.x..:..:.....:x....xx.:.:....x.x:.x..x:.....x.:..:..x.:...x..:.....:.....x.....x.....:..x...:.x.....x:.x..x........:..x..x...xx...x.. 184M 132/184 71.7% 184/94230402 0.0% 0/184 0.0% 79022529 NA +11076 chr4 + 190214555 157335658 157335657 157335883 226 TCTTTTCATATAGGAATCTCCGTATGTTATGATGAAGAAAAATCATGAAATGCTTGAAGGCAATGAGCGCTATGAGGGCTACTGTGTTGACCTGGCTGCAGAAATCGCCAAACATTGTGGGTTCAAGTACAAGTTGACAATTGTTGGTGATGGCAAGTATGGGGCCAGGGATGCAGACACGAAAATTTGGAATGGGATGGTTGGAGAACTTGTATATGGGGTAAGT chr4 - 94230402 78316071 78316070 78316296 15914107 15914106 15914332 226 TTTTGTTTCAAAGGAATCACCATATGTAATGTATAAGAAAAACCATGAACAACTAGAAGGGAATGAGAGATATGAAGGATATTGTGTAGACTTAGCTTCTGAAATAGCAAAACATGTTGGAATAAAATACAAACTGTCAATTGTTGGAGATGGGAAATATGGAGCTAGGGACCCTGAGACTAAGATATGGAATGGCATGGTGGGTGAACTGGTCTATGGGGTAAGT .:..x.:x:.x.......x..:.....x...xxx........:......xx:..x.....x......x.x.....:..x..:.....x...:.:...x.x.....x..x......xx...:x.x..:.....::..x..........x.....x..:.....:..:.....:x.x..x..x..:..x........x.....x..x.....x..x............ 226M 170/226 75.2% 226/94230402 0.0% 0/226 0.0% 79019587 NA +27377 chr4 + 190214555 157336359 157336358 157337117 759 CCTTTTTTTCCCTTACAGAAAGCTGATATTGCAATTGCTCCATTAACTATTACCCTTGTGAGAGAAGAGGTGATTGACTTCTCAAAGCCCTTCATGAGCCTCGGGATATCTATCATGATCAAGAAGCCTCAGAAGTCCAAACCAGGAGTGTTTTCCTTTCTTGATCCTTTAGCCTATGAGATCTGGATGTGCATTGTTTTTGCCTACATTGGGGTCAGTGTAGTTTTATTCCTGGTCAGCAGATTTAGCCCCTACGAGTGGCACACTGAGGAGTTTGAAGATGGAAGAGAAACACAAAGTAG---------------TGAATCAACTAATGAATTTGGGATTTTTAATAGTCTCTGGTTTTCCTTGGGTGCCTTTATGCAGCAAGGATGCGATATTTCGCCAAGGTTGGTTACTCAC--CTGCTTCAACTTTGTGCATTTCAGGTCTCAAGTGGACATT---------CATGGTGTTTATGGATTCACCCT--AAAGAAGTTACCAGCTGCCGACTTCCTGTCCAAGCA----GTTTAAGACTCTTGAAGGACATCCTCTT--AGCTTCGGCATAAGTCTGTGAAATATT----------TGAACAATGTT--CTTTGAATGTTGCTCATCTATTTCTCTGGTGAAATTATACACACCATGAAGAGGCTATAAAATGCATAAGGTTCCTATCATTCCATGCCTTCTTGGAGGGGTACCGTGTTTTTGCTGCATATTCTCATTTTACAGTCATCTGTGTGTTGATCCACAGACC----TGTATATGGGAAAATGGGCAACATTATTTATT chr4 - 94230402 78325854 78325853 78326624 15903779 15903778 15904549 771 CTTGTTTTCCCTTTTCAGAGAGCAGATATAGCTGTTGCCCCCCTCACCATAACACTGGTACGAGAAGAAGTCATAGACTTTTCCAAACCTTTTATGAGCCTGGGAATCTCCATCATGATCAAGAAGCCTCAGAAATCTAAACCGGGCGTATTCTCTTTCCTGGATCCTTTGGCTTATGAAATTTGGATGTGTATAGTCTTTGCTTACATTGGCGTCAGCGTAGTTCTTTTCCTAGTCAGCAGATTCAGCCCTTATGAATGGCAC---------TTGGAAGACGGCAGTGAAGAACCACGTGACCCTCAGAATCCTCCTGATCCTCCCAATGAGTTTGGAATATTTAACAGCCTTTGGTTTTCCCTGGGTGCCTTTATGCAGCAAGGATGCGATATTTCTCCAAGGTTTGTTTCATATCACTCCATCACCTTTTTGCATTTTA---------TGGTCATTTTCTGATGCCATGGTGCATATATGTTCCATTTTCAAATTTATTTTTAATTCTAAATTTTTTGTTTAGACATCTCATTCAGTGCT------AAACATCATCATCAAGCCAC----TATGTTTGCTAACAGTCACCTCCAGTGTGAGTGGCATTGCCTTATAATGCTGTTTATGCATT--TCTGCCAAACTTATATACACCATGTTGAGGCTGTAAAATGCATAGGGTT-TTCTGTTTTCAGCAATGCTTGGAGGGCTACCGTGTTTTTGCTGCATA-TCTCATTTTACGGTCATCT---CCTTGATGCATAAAACATATTATGCTTTGCAAAATAAG---AATTATTTATT .:.x....:..:..x....:...x.....x..x:....:..x:.x..:..x..x..x..:x.......:..x..x.....:..x..:..:..:........x..:..x..:.......................:..:.....:..x..:..:..:..:..x........:..:.....:..:........:..x..:.....:........x.....:......:.x.....:...........:.....:..:..:......---------..x.....:..x..x...:x..x.x..::---------------...x:.xx.:.....:.....:..x.....:..:..:.........:..................................x........x...x.x:.:--..x.x...x....x.......:.---------...x....---------.......:x...:x:...xx::.--...xxx:..x::.::.x:x:.:..::...::.::..----:..:.:x:..------::.....x..x.--...:x.----..x..:..:x..xx:.:----------...::::::..--...xx....:..:.:..x:...--....x::..x.....:........xx......:...........:....-:.x.xx..:..xxxx.x.........x....................-...........:.......---:x.....x..:.:.x.----.:.::x.x.x.....::.---x.......... 264M9D29M15I100M2I23M9D8M9I23M2I36M4I10M6D12M2I6M4D17M10I11M2I22M2D49M1D47M1D19M3D16M4I18M3D11M 532/721 73.8% 771/94230402 0.0% 88/721 12.2% 79010505 NA +3231 chr4 + 190214555 157337993 157337992 157338056 64 TGTGTATATATATGTGTATATATATATATATATATATATATATATATATATATATATACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x...:....:..::.:.x......xx:.:.....:.:...:...x:....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 119974953 70239602 +3362 chr4 + 190214555 157337995 157337994 157338058 64 TGTATATATATGTGTATATATATATATATATATATATATATATATATATATATATACACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ...:..:...:x........:..::.:.x......xx:.:.....:.:...:...x........ 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 119974955 70239600 +13036 chr4 + 190214555 157341261 157341260 157341467 207 TAGATCCCTCTCTGGGCGCATTGTTGGAGGTGTGTGGTGGTTCTTTACCCTGATCATAATCTCCTCCTACACGGCTAACTTAGCTGCCTTCCTGACTGTAGAGAGGATGGTGTCTCCCATCGAAAGTGCTGAGGATCTTTCTAAGCAAACAGAAATTGCTTATGGAACATTAGACTCTGGCTCCACTAAAGAGTTTTTCAGGGTAAG chr4 - 94230402 78333725 78333724 78333931 15896472 15896471 15896678 207 TAGATCTCTCTCAGGGCGAATTGTTGGAGGAGTCTGGTGGTTCTTCACTCTCATCATTATCTCTTCCTACACTGCTAATCTTGCTGCCTTCCTTACGGTGGAAAGGATGGTGTCTCCCATAGAGAGCGCAGAGGATCTGGCTAAGCAAACTGAGATAGCCTATGGCACTTTGGATTCAGGCTCAACCAAAGAATTCTTTAGAGTAAG ......:.....x.....x...........x..x...........:..:..x.....x.....:........x.....::.x...........x..x..:..:.................x..:..:..x........xx..........x..:..x..:.....x..x..:..:..x.....x..:.....:..:..:..:..... 207M 168/207 81.2% 207/94230402 0.0% 0/207 0.0% 79007536 NA +3635 chr4 + 190214555 157349378 157349377 157349484 107 CTGTTTTTTTTTCATAGTCAAATTTTCTTAAGATTGTTAAAATC--------TTCCTTCTTTCCTTCCTTCCTCCCTCCTTCCCC-CGCTTCCTCCCCCCACCCTTCCTTCCTTCC chr4 - 94230402 92729589 92729588 92729701 1500702 1500701 1500814 113 cttttttttttccattttc---cttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ..x........:...xx..---:..:...x.xx::x:.x.x...--------..:..:....:.:.x:..::.:...........-.:....:..........:...:.::..... 19M3D22M8I33M1I30M 74/104 71.2% 113/94230402 0.0% 12/104 11.5% 64619789 NA +3008 chr4 + 190214555 157352722 157352721 157352771 50 AAAAAAAAAAAAAAAAACACACACAACAACAACAACAAAAACACTTATAG chr4 - 94230402 16619856 16619855 16619905 77610498 77610497 77610547 50 AAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCTGTAG ...x:.......x....x...x.............x.....x..:.:... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 140732866 49481689 +4628 chr4 + 190214555 157355594 157355593 157355825 232 ATATATATATTTATATATATTTATTTATATATATTTATTTATATATATTTA----TTTATATATTTATTTATATTTATTTTTATATATTTATTTATATATT--TATTTATATATATTTGTATATATTTATTTATATATTTATTTATATATTTATTTATATATTTACATATATTAGTTATATATATTTATATAT------TTATATATATTAGTTATATATATTTATATATTAGTTATATATATT chr4 - 94230402 49089516 49089515 49089751 45140652 45140651 45140887 236 ATATACATACTAAT-----TCTATCTTTCTTAAAGCATTTTTATATAATGAAGCGTTCTTATTTTTGTCTATGTGTATTTTTATATGTCTATTTATATGTTTATATTTACCTATGCTTTGAAATCTGCGTGCTTGTGTTTATTTGCAGTATTACACATTTAAACAAATGCATTTAATGCATCTATTTGAATGTGATGCATCGCATACATGTGTGA---ACATTAATGTTTTAGTCAAAGATATT .....:...:.x..-----.:...:.x.x.xx.xx:....x......x.x.----..:x...x...:.:...:.x...........:.:.........:..--......:x...::..xx.x..x.x::.x:x.:.:.......::.xxx...:x:..x..xx:.x..::...x:x.::..x.....:x..:.------.:::...:..xx..x.---.:...x..:.x.....:.x.x..... 14M5D32M4I46M2I90M6I16M3D26M 145/224 64.7% 236/94230402 0.0% 20/224 8.9% 108266078 81948477 +3210 chr4 + 190214555 157355918 157355917 157355995 78 TATATTTATATATATTTATATATT---AATATATATTTATATATTTATGTATATTAATATATATATTTATATATTTATATA chr4 - 94230402 78899121 78899120 78899201 15331202 15331201 15331282 81 TATACTCAGTTTTATATGTATAGGCAGAATGTATTTTTATACACTTATGTATATAAATGTATGTTTTTATGTATTTCTCTA ....:.:.xx.x...x.:....xx---...:...x......:.:..........x...:...:.x.....:.....x.x.. 24M3I54M 58/78 74.4% 81/94230402 0.0% 3/78 3.8% 78456797 NA +3139 chr4 + 190214555 157355981 157355980 157356057 77 TTATATATTTATATATATTTATATATGTATTTATATATATTTATATATTTATATTTATTTATATATGTATTTATATA chr4 - 94230402 52481231 52481230 52481307 41749096 41749095 41749172 77 TTCTTTACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..x.x..:x.:x.....xx::..:......x....:...:x:.:...:.x....xx.:......:...:........ 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 104874750 85339805 +3165 chr4 + 190214555 157355988 157355987 157356051 64 TTTATATATATTTATATATGTATTTATATATATTTATATATTTA-------------TATTTATTTATATATGTATT chr4 - 94230402 85382910 85382909 85382986 8847417 8847416 8847493 77 TTTATATATATGTACATATGTATTTCAGTATATTTATGTATTTAGGTGATGAGATTTTATTCAATTAAATATCTACT ...........x..:..........xx:.........:......-------------....:.x...x....x..:. 44M13I20M 53/64 82.8% 77/94230402 0.0% 13/64 20.3% 71973078 NA +3683 chr4 + 190214555 157356052 157356051 157356213 162 TATATATATTTAT-ATATTTATATTTATTTATTTATATATATTTATATATTTATATTTATTTATTTATATATATTTATATAT----ATTTATATATTTATATTTATTTATTTATATATATTTATATATATTTATATATTTAT----TTATATATATTTATATATATATTTA chr4 - 94230402 49089517 49089516 49089685 45140718 45140717 45140886 169 TATACATACTAATTCTATCTTTCTTAAAGCATTTTTATATAATGAAGCGTTCTTATTT--TTGTCTATGTGTATTTTTATATGTCTATTTATATGTTTATATTTACCTATGCTTTGAAATCTGCGTGCTTGTGTTTATTTGCAGTATTACACATTTAAACAAATGCATTTA ....:...:.x..-x...:.x.x..x.xx:....x......x.x.x:::..:x.....--..:.:...:.:.....x.....----........:..........::...x:x.xx.x..:.:::.::x.x.:.x.....::----...:.:..x.xx.:.x..::..... 13M1I44M2D22M4I56M4I25M 105/160 65.6% 169/94230402 0.0% 11/160 6.9% 108266535 81948020 +25648 chr4 + 190214555 157359871 157359870 157361169 1299 ATCTGGCCCCTTACTTTTCCTGCAGAGATCTAAAATTGCAGTGTTTGATAAAATGTGGACCTACATGCGGAGTGCGGAGCCCTCTGTGTTTGTGAGGACTACGGCCGAAGGGGTGGCTAGAGTGCGGAAGTCCAAAGGGAAATATGCCTACTTGTTGGAGTCCACGATGAACGAGTACATTGAGCAAAGGAAGCCTTGCGACACCATGAAAGTTGGTGGAAACCTGGATTCCAAAGGCTATGGCATCGCAACACCTAAAGGATCCTCATTAAGGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTTATAGTATCCCACCTACCCTGATGTAT--CTTTAAGACTCTCTTACGGTTTGTATACGGATATGAGGTAACTCACCATCACAAAAATGACCAAAAAACGTTTCTGAATGTTTTTAAACATTTAGATACTGTTTTATATATTTATGACAGGATTTTGTTTTGTTTGGTTTGCTTTGTTTTAAAACATATCCTTTTTTTTTTCCTTTAAGAGTTAAAACACATTCATTTTAAGGAATACATGTTTGTTTAGCTTTACTTTGTTTGAGTTTTTTTTTCCACATTTCTAACTACCTTGTCAGTCTACCAGCCTGCTTACAAACACTCTGCATACAGACTAAGCAAATGGCTGT----ATCCTAACAGTAAA--CTGAAATAACTAACTGAGAAATATGCCACTTTTTAATTTTCATTTTAATTTTTGTTTAAGGGATATACTTTGGGGAAAGGAAAATGCACTTTGAATTTCTTTGCACACATCTCTTTACTATGTAGTTAACTCTTTGTATTCCTATTTTGTCGTTTGTTTTTTTTTTAGTGGAG----TCACATTCAAGACACTGTTATTTGTTTGTTGTGGATGTGAGTACATTGCTGTAGAATATAGAACTCCCCATATTAGCACTCTTTCCTTTATTTTCTTTTTGTTATGCTCTACCACCTTACCCAAAGTTTCAGATTTTTAGTAGCTCATAGTAACATATTATTGTGGCCTTTTTCCCACTTCATTTTTTTGTGACAAGAGTTGCCACAGAAGCCAAAGAAAAACAAATTAAAACAAAACAAACAAAAAGTCTAAAATTTGCTCACCCTGTCTGACAAG-TATGTTTTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAGCCCCAGTGAGAAAAGTAATGGGTAACTCAATGCAAAACAA chr4 - 94230402 78346280 78346279 78347276 15883127 15883126 15884123 997 ACCTCCCTCCTTTCCTCTCTCCCAGAGATCAAAAATTGCCGTCTACGAGAAAATGTGGTCTTACATGAAGTCGGCCGAGCCCTCCGTGTTCACCAAAACCACGGCAGACGGGGTGGCGAGGGTGCGCAAGTCCAAGGGGAAGTTCGCCTTCCTGCTGGAGTCGACGATGAACGAGTACATCGAGCAGCGCAAGCCCTGCGACACCATGAAAGTTGGAGGGAACCTGGATTCCAAGGGCTACGGGGTAGCCACCCCCAAAGGCTCAGCATTAAGGTGGGTGGAATAATATAACAATATCC---ATGTTGTTATAGTATTCCACCTACCCTGATGTATTGTGTTGTCATTTTCTTTC---TTGTG---GATTTTGAGGTAAC------------------------------TTTTAAAGTTTAAAAACCTTCAA----TATTCCATGGAGTTA-AATAAGACGGTAAATTA--CGGTTTCGTTTATTT---AATGCATCCTTTTTTTTT---------------------------------------------TTTAG---TGCTCTCTTCGTGTTGTCCTTTCTG-ATTGTTTGTTGCTGTTTTAATTTTACAGTTCG-------------------------------ATGGCTTTTTCAATTTAAATGGTAAAAGCCGAGTTAAC---CTGCCATACGTGACGAATGTTAA----------------------------------------------------------------------------CTGCATGATGTGG-------------------TGTTCTTGTTACTTTTTTTCTCAAAGACGATTTCCCCATCCCGCACACT--------TCAGTTTTG-------------------AGCAAATGTTATCCTCCATGCCA-----CCTTCCAATATTTAACCCTGTATTTGCTGTACAAACATTTTTATAGCTCCACGTTCTGTGAAATTT----TAGCCAATT----TGTCCTCTTGTGCTCCTT-TTTTTATACGTTACGATTTCCTG----------------------------------------------AGCATTTGTGCATTTT-TCTTACAAGTTATGTTTTATCGTTTCAAGAAATGCTGTTAACCTGGCAGTATTAAAACTGAATGAGCAAGGCCTCTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGACTCCAAGGTCAGCCTCAATGTCACCACAATCGGGTACCTTAGTGGAGAGTAA .:..xx.:....x.:.:..::x........x........x..x.x:..x.........x.:......x:.xxx..x........:.....:::x.::..:.....x..x........x..:.....x........:.....:.x:....x.:..:.......x.................:.....:x.x.....:....................x..:..............:.....:..x:.x..x..x..:.....x..xx...................:...........x.---...............:..................--:x..:xx.:.:....x.---....:---.:x.x.........------------------------------.:.x..x....xx....x..:.:----.:..::..:x.x...-:.:.:..:xx.:xx..:--:.....xx...:...---..:::.............---------------------------------------------.....---.:..:.x..:.x...x.::....::-...x:.x::.:.:x.x.:.:.:.xx...:::.-------------------------------......x.----..::x..::.....--.:..:x....---...xx.x.::..x.:xx.x....----------------------------------------------------------------------------..x:.:x....:.-------------------.x..x.:...xx.......:.:.:x.:x.----:.x...:.x:x.....--------.:x...x..-------------------..x.x..:xx.::.:....:::.-----.:....xx.....xx:::.xxx.x....x...x.x.x.x:::.x..:.:..x:..:.xx.x.::.:----..:.xx...----..x...:..x:x.x.:.:-.....x.::.x:.x..x..x.::----------------------------------------------.:x.....:x..:::.-...x.....-.........................x........x......:.............:........x..............................................................:.............:..:..xx.xx.xx.x:.....x..:.:..x.:.::.. 299M3D34M2I17M3D5M3D14M30D23M4D15M1D17M2D15M3D18M45D5M3D25M1D32M31D8M4I14M2I10M3D23M76D13M19D29M4I16M8D9M19D23M5D66M4D9M4D18M1D23M46D16M1D9M1I179M 709/984 72.1% 997/94230402 0.0% 328/984 33.3% 79013591 NA +6048 chr4 + 190214555 157360991 157360990 157361131 141 TATGTT--TTATCGTTTCAAGAAATGCGGTTAACCTCGCAGTACTAAAACTGAATGAACAAGGCCTGTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGTCAGCC chr4 - 94230402 78358986 78358985 78359128 15871275 15871274 15871417 143 TATGTTATTTCCCACGTGAAGAACTCCTGTAAACCTTGCAGTATTGAAACTCAGTGAACAAGGCATCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAGGGTGAATGTGGAGCCAAGGACTCCGGAAGTAAGGTCAGTC ......--..x:.::x.x.....x.x.x..x.....:......:.:.....x.:..........x.x..:.....::......................:..:..x..:..:..x:x.::..:xxx:.:xxx:........:. 6M2I135M 100/141 70.9% 143/94230402 0.0% 2/141 1.4% 79002005 NA +15419 chr4 + 190214555 157361484 157361483 157361671 188 TGAATAACATAAAATAACATTG-ATAATGTTATTTATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAGTTGCTGCAGGTTTT chr4 - 94230402 78358952 78358951 78359140 15871263 15871262 15871451 189 TGAATAACATAAAATAACATAATATAATGTTATTTATGTTATTTCCCACGTGAAGAACTCCTGTAAACCTTGCAGTATTGAAACTCAGTGAACAAGGCATCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAGGGTGAATGTGGAGCCAAGGACTCCGGAAGTAAGGTCAGTCGCTGAAGGTCTT ....................x:-.....................:.............:..x.....:.......................:......:.....................................:.......................:...............:....x....:.. 22M1I166M 175/188 93.1% 189/94230402 0.0% 1/188 0.5% 79002532 NA +6314 chr4 + 190214555 157361516 157361515 157361657 142 TTATGTTATTTTCCACGTGAAGAACCCCAGTAAATCTTGCAGTATTGAAACTCAGTGAGCAAGGCGTCTTAGACAAGCTGAAAAACAAATGGTGGTACGATAAAGGTGAATGTGGAGCCAAGGACTCTGGAAGTAAGGTCAG chr4 - 94230402 78347097 78347096 78347236 15883167 15883166 15883306 140 TTATGTT--TTATCGTTTCAAGAAATGCTGTTAACCTGGCAGTATTAAAACTGAATGAGCAAGGCCTCTTGGACAAATTGAAAAACAAATGGTGGTACGACAAAGGAGAGTGCGGCAGCGGGGGAGGTGACTCCAAGGTCAG .......--..x:.::x.x.....x:x.x..x..:..x........:.....x.:..........x....:.....::......................:.....x..:..:..x:x.::..:xxx..:xxx:........ 7M2D133M 102/140 72.9% 140/94230402 0.0% 2/140 1.4% 79014419 NA +13061 chr4 + 190214555 157362795 157362794 157363062 268 TTAGGAAAAGACCAGTGCCCTCAGTCTGAGCAACGTTGCTGGAGTATTCTACATCCTTGTCGGGGGCCTTGGTTTGGCAATGCTGGTGGCTTTGATTGAGTTCTGTTACAAGTCAAGGGCCGAGGCGAAACGAATGAAGGTGGCAAAGAATGCACAGAATATTAACCCATCTTCCTCGCAGAATTCACAGAATTTTGCAACTTATAAGGAAGGTTACAACGTATATGGCATCGAAAGTGTTAAAATTTAGGGGGTAGGAACGAGGCTC chr4 - 94230402 78361199 78361198 78361465 15868938 15868937 15869204 267 TTAGGACAAGACCAGTGCTCTGAGCCTGAGCAATGTGGCTGGGGTTTTCTATATTCTTGTTGGAGGCCTCGGGCTCGCCATGATGGTGGCTTTAATCGAGTTTTGTTACAAGTCTCGGGCAGAGTCCAAGCGAATGAAACTCACCAAGAACACCCAAAACTTTAAACCTGCTCCCAGCACCAATACCCAGAATTACGCTACGTACAGAGAAGGCTACAACGTGTATGGCACAGAAAGCGTGAAAATCTA-GGGGTACGAGTAAGGTCC ......x...........:..x..:........:..x.....:..x.....:..:.....:..:.....:..x:.x..x...x..........:..:.....:...........xx....x...x.x..:........:x.x:.x.....::.x..:..:x....x..xx..:..xxxxxx...x.x.......x:..x..x..:.::.....:........:.......:x.....:..x.....:..-......x..:::...::. 249M1D18M 197/267 73.8% 267/94230402 0.0% 1/267 0.4% 79001596 NA +3182 chr4 + 190214555 157395032 157395031 157395137 106 GGTAGAAAGGAAGGAAGAAAGATGGGAGGGAGGGAGGAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAAAGAAAGAGAAAGAGAAAGGAAGAGAGAAAG chr4 - 94230402 80057318 80057317 80057423 14172980 14172979 14173085 106 GGTGGGAAAAGAAAAAAATAGCAGCAAGGGAGTAGAGCAGGAGAGAAAACAGGCAAGGATGAACTGAGAGAGAGAAAGGGCCAAGAAGGAACTGGAATTGAGCGAG ...:.:..:::.::..:.x..xx.x:......x:::.x....:..:..:x.:.x.....x...xx......:......::xx.::...::.xx....xx...x:.. 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% 77337714 NA +3159 chr4 + 190214555 157395052 157395051 157395208 157 GATGGGAGGGAGGGAGGAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAA----AGAAAGAGAAAGAGAAAGGAAGAGAGAAAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAA chr4 - 94230402 32361460 32361459 32361620 61868783 61868782 61868943 161 GGCAGAAGGCAGTGAAGCAGGAAAGTGAAATGGATAAGGAGAGAAAACAGAAATAAGAGTAGCAAGAGAACTACACTGAGTCTGGAGAAAAAAAAAAAACAGGTAAGAGAATAAAGAGATGAAGCAGCAATAAGTGAGAACCAAAGAAAAAATGCAATAAA .:::.:...x..x..:.x.......x:.::x:.:x.:.:...:..:.x.....x..----..x.......xx.x.xx.::xxx.:::..:...:...:.x..:x..::...x.....:.x:..:x.:x:.x.::x:::..xx:......:..x.x..x... 56M4I101M 90/157 57.3% 161/94230402 0.0% 4/157 2.5% 125033592 65180963 +3917 chr4 + 190214555 157395055 157395054 157395203 149 GGGAGGGAGGGAGGAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAAAGAAAGAGAAA-----GAGAAAGGAAGAGAGAAAGAAAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAA-------AGAAAGAA chr4 - 94230402 90814945 90814944 90815103 3415300 3415299 3415458 159 GGGAGAGAGAGAGAGGTGGGACGGGTTATGGGAGAGAGACAAAAGAGAGACAAAGAAAGAGGAACTTTTTAAGAAGGAATAGGAATTGAA--TAGGAATGTGAAAGGAATAGGACTAGGAATGAAAAAAGAATAGGAAAGGAAAGACAGCTCCAGAAAGAA .....:...:...:::x.::.x.::xx.x..:..::...x..:.....:.x..........:..-----x.::......x..::.xx...--x.:..:x.x........x.:::xx..:..x...::..::.x..:..::...::.-------........ 64M5I21M2D54M7I8M 94/147 63.9% 159/94230402 0.0% 14/147 9.5% 66580110 NA +3084 chr4 + 190214555 157395068 157395067 157395149 82 GAAGGAAAGGAAGGAAGGAAGGAAGAAAAGAGAGAAAGAAAGAAAGAGAAAGAGAAAGGAAGAGAGAAAGAAAGAAAGAGAG chr4 - 94230402 27736736 27736735 27736817 66493586 66493585 66493667 82 GGGGGAAGGGAAGGGAGGATGGAAGAAAAAAAAAAATACAATACAAAAACCGAAAAATTAAAAACGAAAAATAGCAAAATAG .::....:......:....x.........:.:.:..x:x..x.x.:.:.xx..:...xx..:.:x....:.x..x..:.x.. 82M 54/82 65.9% 82/94230402 0.0% 0/82 0.0% 129658332 60556223 +3793 chr4 + 190214555 157395114 157395113 157395288 175 AGAAAGAGAAAGGAAGAGAGAAAGA-----------AAGAAAGAGAGAGAAAGGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAA--AGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 22272879 22272878 22273068 71957335 71957334 71957524 190 AGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGAGGCAAGACTCGAGAGGCAGAACGTCAGAAA ....x::.x.......x.:....:.-----------.x:.:...:....:.::..::...:........xxx....x:.:xx..:..:xx.xx.::.xx.:.:::.:x..x...--.::.....:...:::.x...x.x......::.:.....x.:.:..:x.::.--x..:..:x....x.xx..... 25M11I78M2I51M2I21M 107/175 61.1% 190/94230402 0.0% 15/175 8.6% 135122235 55092320 +3793 chr4 + 190214555 157395155 157395154 157395286 132 GGAAGAAAGAAAGAAAAGAAGGAAAGAAAGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAA--------AGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGAAAGAAAGA chr4 - 94230402 72821455 72821454 72821595 21408808 21408807 21408948 141 GAAAGGCAAGAAGAAAAGCAGACCTGCAGTGAAGCCAAGGGGGAAAGAAAGAAAAGAAAGAATAGTTTGCAGGGAGGAGGGGGGGAATCAGTCTGAAAGAAAAAGATAAA-ATAGAAAGAACCAGTAAAAAGGAAAATAAAA .:...:x.::........x..:xxx.x.:x:...xx...:::....................--------..::..:.:.:.:::.:xx..xxx........:.:.x...-.x........--..x..:..:....:x..:. 62M8I40M1D10M2I19M 88/131 67.2% 141/94230402 0.0% 11/131 8.4% 84573700 NA +3159 chr4 + 190214555 157395183 157395182 157395248 66 AGAAAGAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAGAAAGAAAGAAA chr4 - 94230402 42895012 42895011 42895077 51335326 51335325 51335391 66 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAA .:.:..::.....:....:...:.:..:...x.....:....x.....xx.x:.....xx.:.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 114500171 75714384 +3360 chr4 + 190214555 157395200 157395199 157395317 118 AGAAAGAAAAGAAAGAAAGA-AAGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAGAAAGAAAGA chr4 - 94230402 11253653 11253652 11253771 82976632 82976631 82976750 119 AAGAAGAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGA .::......x...:...::.-..x....:.:.xxx.:.x.:.:....:..:::...:..:.:::.x..:..xx.x.x.:....x.::x:::....x.:....:.x.:....x...x... 20M1I98M 72/118 61.0% 119/94230402 0.0% 1/118 0.8% 146141547 44073008 +3480 chr4 + 190214555 157432185 157432184 157432387 203 GAAACTCTTGCCTTTCAAATGTGGAAATTTTTCTTAGTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTTTCATTTCTGTTTCTGGAGCACTATATTCAGAATTTGTTATTCTACTAGCTCATTCTTCAAGTGAAACTCTCCTCTATTTTCCAAAAACAA-------AAAGTGTTTTTGCTT chr4 - 94230402 50558474 50558473 50558675 43671728 43671727 43671929 202 GACACAATTACCATTTAAA-----AAACTTTGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAGATTTACAGAAAAATATA---GAAGTTTTGCACCAAATTATCTTACTCTGCCACCCTCACTCCCAACTGTCTTTCAAGATTCAGATGGCCAAAGGGATTTTGCTT ..x..xx..:..x..:...-----...:...x...xx.......::.....x..........::.......:::...:.:x:::x:x:x:x..x.x...:.x.xxx:...x::..:x.x....---::.:...xx:.::xx.:..x..:.:...x.x.x:xxx....:.xx..:.:..:...:.x:x.-------....x.x........ 19M5D99M3D62M7I15M 117/195 60.0% 202/94230402 0.0% 15/195 7.7% 106873711 83340844 +3058 chr4 + 190214555 157432212 157432211 157432277 66 TTTTTCTTAGTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 81428418 81428417 81428483 12801920 12801919 12801985 66 TTTATTTTAGTTTTTTGTGTGTGTGTGTGTGTATGGTCATGTATACGTACAATTGTGTTTGGATGT ...x.:.......xx.................:..xx::.....::..:::xx.....x..x:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 76003794 NA +11838 chr4 + 190214555 157502689 157502688 157503010 322 GGGGATTTAAGTTTAGTAAAAATAAAGCTCAAATGCAAGCATAGATAGTCAATAATAAGCAAGCCAGAAATTCCATT---TGCAAATGC-CTGGACTCCTACTAGGCATTTCCTGCACATTCAGAGCTCATCACAAAAATCTTCAATTAGCACCAGAGGACATTGAAAAAGGAAAAAAGAGTGTTAGTGTGCACTTGGATGCAGATGC-TGCTACCAAAG-AAAGGCGCAATTGCATGCCAGCCTACACAGACAGCAACCTTGTTTTA-------------TGTGAGAAATTTGCATATTAAG-AAAAGACTTAGGGTATTTGCAACACACTTTTCAGTATT chr4 - 94230402 71578948 71578947 71579272 22651131 22651130 22651455 325 GAGGACTTATGCTTACTAA---TGCAGCCCAAATGCTA----------TCAGTAACTAGTTAGGAAGAAATTTCATTCATTTCAAAAGCTCTGGGCTCCTGGTAGGCATTTCCTGCATATTCATAGTTAGTAATAAGA-TCTTCAATTAGCACTAGAGGGCATTGGAAAAGAAAGAAAGA--GTTAGTATGCACTGAGATGCAAATGCTTTCTAGCAGTGAAAAGGAGCAATTTCATGCCAGCCTGCACTGACAAGAAACTTTTTTAAAATTATCTTTCACTGTTAGAGATTTGCATTTTAAGTTGAAGGCCTGAAATGTTAGTAACATA-TTTACATTATT .:...:...x.:...x...---.:x...:.......x.----------...:...:x..:x..xx.......:....---.x....x..-....:.....:x...............:.....x..:.x:.x.:..:.-..............:.....:.....:.....:..:.....--......:......x:......:....-.x...x..:x.-.....x......x...........:...x....:x..x...x...x.-------------...x...:........x.....-x:...:.:.::::.:..x.:....:.-...x..x.... 19M3D16M10D29M3I9M1I48M1D41M2D26M1I11M1I47M13I22M1I26M1D11M 236/305 77.4% 325/94230402 0.0% 37/305 12.1% 85923741 NA +3146 chr4 + 190214555 157536795 157536794 157536882 88 AAAGTTTATGGATTTGTGTTGAGCCACATTCAAAGCCACCCTGGGCCACATGTGGTCTGCGGGCCATGGGTTGGACAAGCTTGATTTA chr4 - 94230402 37056368 37056367 37056453 57173950 57173949 57174035 86 AAATTTCTTGAACATATG--GGTCCATATTGCTAGCTATCCCAAGCTGCATGTAGTCTGTGGACCATGGGTTGGACTTGTCCAATTCA ...x..:x..:.:x.:..--.:x...:...xxx...:.:..:::..::.....:.....:..:.............xx.::::...:. 18M2D68M 56/86 65.1% 86/94230402 0.0% 2/86 2.3% 120480427 69734128 +3056 chr4 + 190214555 157563177 157563176 157563282 106 CTACTTGCTTCCCAAAAGGCTATATCTATATATCCCTTAAACATATATATATATACACACACACACATATATATA------TATTCTTATTTGCATTCAATTTTATAAAGCA chr4 - 94230402 21908433 21908432 21908544 72321859 72321858 72321970 112 CTACATTTTTTTCTGAAATATATATTAAAATGTAGATCAGATATATATGTATACACACACACACACACATTAACACAGCACTATTCTTACTAAAGTTTCATTATTTATAACA ....x.x:..::.x:..:xx.....:x.x..:.xxx.:.:.:......:....:.............:..xx.:.------........:.x:x:..:x...x.x..x.:.. 75M6I31M 69/106 65.1% 112/94230402 0.0% 6/106 5.7% 135654744 54559811 +3101 chr4 + 190214555 157563198 157563197 157563262 65 ATATCTATATATCCCTTAAACATATATATATATACACACACACACATATATATATATTCTTATTT chr4 - 94230402 8681917 8681916 8681981 85548422 85548421 85548486 65 ATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTT .....:..:.x.xx:x....:........:...:........:.......xx.x.x..:..x... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 148881281 41333274 +3045 chr4 + 190214555 157581765 157581764 157581812 48 TTTTCTTTCTTTCTTTCCTTTTTTTTTTTTTTTTTCTTTTTTTGAGAC chr4 - 94230402 92014228 92014227 92014275 2216128 2216127 2216175 48 TTTCCTTCCTTTCTTTCCTTTTTCTTCTCTCTTTTCTTTTGCTGTAAC ...:...:...............:..:.:.:.........x:..x:.. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 65567537 NA +3006 chr4 + 190214555 157590468 157590467 157590548 81 TGTTTGTTTGTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCT chr4 - 94230402 53118142 53118141 53118222 41112181 41112180 41112261 81 TATTTATCCTCCTTTATTCTCTGTGTTCTTCTTTCTTTATCTGTGACTCTCCTGCTTTGTTTGTTTGTTGCTTTCTCCTTT .:...:.::x::..:x....:.x.x..:..........x...x.xx..:..:.x....x...x...x..x......::.:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 104472326 85742229 +3100 chr4 + 190214555 157612019 157612018 157612113 95 CTGCAATATTTCTTTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 41570542 41570541 41570636 52659767 52659766 52659861 95 CTGACATATATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCT ...xx....x.:..x..:x..x.:::.:.x...:...:...............xx..:x:x.xx:::x...:::....:.xxx............ 95M 61/95 64.2% 95/94230402 0.0% 0/95 0.0% 116041477 74173078 +3325 chr4 + 190214555 157612030 157612029 157612152 123 CTTTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTT chr4 - 94230402 23468146 23468145 23468268 70762135 70762134 70762257 123 CTTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCT ......xx.x.:..:...::..:....:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx.:::.x..x......x:......x:.......:x..x...::. 123M 75/123 61.0% 123/94230402 0.0% 0/123 0.0% 134143884 56070671 +3613 chr4 + 190214555 157612036 157612035 157612135 100 CTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTTCT chr4 - 94230402 15266896 15266895 15266995 78963408 78963407 78963507 100 CTTTCCCACCCCCCTTCTCATTTTCAGGCTTTATTTCCTTAACCTTTGATTTCAGTCTTACTTTTTCTACATTTTTCTTAACTTTTTTCTTTTCTTTTTT .....::x.:::......:x:....xxx....x....:..xx:::..xx....xx....x....:.:.x:x.:......xx...:.............:. 100M 66/100 66.0% 100/94230402 0.0% 0/100 0.0% 142345140 47869415 +3236 chr4 + 190214555 157612074 157612073 157612157 84 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT chr4 - 94230402 45185583 45185582 45185666 49044737 49044736 49044820 84 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x...............:x...:.:x.:...:..:...:... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 112426491 77788064 +3092 chr4 + 190214555 157618328 157618327 157618383 56 TTGTCTTAAAAAAAAAAAAAAAAGAAAAAGAAAAACTGTTCAAATGTGCATATTAT chr4 - 94230402 55145702 55145701 55145757 39084646 39084645 39084701 56 TTGGCATGAAGGAAAAGAGAAAAGAAAAAAAAGAACTGTACAAATGCATTTATTAT ...x.x.:..::....:.:..........:..:......x......:::x...... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 102472626 87741929 +3138 chr4 + 190214555 157626894 157626893 157626942 49 ATTGTCCTGGGTTTTTTTGTTGTTGTTGATTTGTTTTTTTTTTTTTCCT chr4 - 94230402 45429640 45429639 45429688 48800715 48800714 48800763 49 ATTGTTGGGGTTTTTTTTGTTGTTGTTGGTTGGTTGTTTTTTTTTTCTT .....:xx..x.................:..x...x...........:. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 112197254 78017301 +3178 chr4 + 190214555 157626898 157626897 157626955 58 TCCTGGGTTTTTTTGTTGTTGTTGATTTGTTTTTTTTTTTTTC----CTGCTTCATCATCAT chr4 - 94230402 66904534 66904533 66904595 27325808 27325807 27325869 62 TCTTGGGGTTTTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTTGAGGAGGCTTCATCTACAT ..:....x................x...........x.....:----xx........xx... 43M4I15M 49/58 84.5% 62/94230402 0.0% 4/58 6.9% 90722364 NA +3940 chr4 + 190214555 157660686 157660685 157660858 173 TTATTGCATTTCCTTACATTTTGGATTTTTCATTCTTTAATATTATGCCACATTTA--ATTC-----------ATTCTCTTGTTTATTGGTGTATTCTGTTTTTGCTTAATTATTATCATTAGAAGTTTAAAAAATGTACTATACTTTTAC--ACATCACCTTATTTTTGCCCTGATTAATAATTTCT chr4 - 94230402 36911235 36911234 36911422 57318981 57318980 57319168 188 TTTTTGCCTTTTCTTACATTTTTGATTTTTCACTTTTGTCAATCTTGCCACATTTAACATTCAACTTTTTAATACTCTCTCTTTTCCAGGCTGCTTCTGGTTCAGCTCACTTATCAGTTGTTTGATTTAGCATGATCTTTTTTACTTTAACTAGCATCTCTTTCCATTTACCATCATTTCTAATTGCT ..x....x...:..........x.........:.:..xxxx..:x...........--....-----------.:.....:x...x:x..:xxx.....x..:x...:.x....:.x:xx.xx:.x..x:x.x:..x.x:.x......x..--:....x.:..x:x...:..x.x...xx.....x.. 56M2I4M11I78M2I35M 115/173 66.5% 188/94230402 0.0% 15/173 8.7% 120749451 69465104 +3143 chr4 + 190214555 157663227 157663226 157663269 43 TCTTTTTTTTTTTTTTTTTTTTTTTGGTAAAAAATATTCTTCT chr4 - 94230402 89890375 89890374 89890417 4339986 4339985 4340028 43 TCTTTTGTTCTTTTTTTTTTTTTTTGGTGGAAAGTATCCTTCT ......x..:..................::...:...:..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 67772852 NA +3195 chr4 + 190214555 157715706 157715705 157715836 131 GCTTCTCCTTCACCATCTCACCTCTTTTCTCTGCCCTCTATTTCTACACACACACACACACACACACACACACAAAAGGTCTCCTTATGCCATCTTCTTTACATAGAACACTTTTTTTTATCTTCAGGTTC chr4 - 94230402 32106679 32106678 32106800 62123603 62123602 62123724 122 GTTTTCCCTCTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACAA---------CCTTCTTCCAAATTCTCGGTGAAAATTGCATGTTTTGCTTTCCAAATTC .:..::...::xx.....::::.:::...:..x...x..x..:x.:::...............:....x...x---------....x.x...xx....:x:::x.:.x::.x.x....xx.:.:..::... 73M9D49M 74/122 60.7% 122/94230402 0.0% 9/122 7.4% 125609027 64605528 +3042 chr4 + 190214555 157718527 157718526 157718577 51 CTCTGGTGTAAGACTTCCAGATGCTGTTCTAGAATTCTTCTGTTCTTTCTT chr4 - 94230402 80497122 80497121 80497172 13733231 13733230 13733281 51 CTTCAGTGTCAGACTTCCAGATGCTGCTCCGGACTTCTCCCGTTTTCTCCT ..:::....x................:..::..x....:.:...:.:..:. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 77221405 NA +3296 chr4 + 190214555 157830340 157830339 157830411 72 TATATATATATATGTATATATATATGTATACATATATATATGTATATATACACATATATATATGTATACATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x.....x.::..:..:............:::.:..::xx.....x..x.....:.:...x..:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 105349104 84865451 +3073 chr4 + 190214555 157830358 157830357 157830424 67 TATATATGTATACATATATATATGTATATATACACATATATATATGTATACATATATACACATATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.....:.xxx.......:...:..x.:.....::x.:..:.::x:.....:..:.......:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 109663320 80551235 +3251 chr4 + 190214555 157833340 157833339 157833428 89 CCTTTTCTATTTCTTTAGTGTAGGTCTGCTAGTGATAAATTTCTTAGTTTTTTTTTTTTTTTTTTTTTGGCCAGAAAGTGCTGACATTG chr4 - 94230402 7522779 7522778 7522867 86707536 86707535 86707624 89 CCTCGCCTATTCCTTTGGTGAGAATCAGGCATGATTAAGGCTCTTTTCTTTTTTTTTTTTTTTTTCCTGGGCAGAAAAAGGAGAAATTG ...:x:.....:....:...x:::..x.x:.xx:x...:x:....xx:.................::...x......:x.xx..x.... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 150310561 39903994 +3064 chr4 + 190214555 157862293 157862292 157862329 37 TTTGTTTGTTTGTTTTGTTTTGTTTTTTTCTTTCTTT chr4 - 94230402 70077251 70077250 70077287 24153116 24153115 24153152 37 TTTGTTTGTTTGTTTTGTTTTGTTTTTTTCTCTCCCT ...............................:..::. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 87785042 NA +3031 chr4 + 190214555 157863885 157863884 157863948 64 TTTTTCCATTTTTTGTTTTTGTTTTTGTTTTTGTTTTCTCTTTTATTTTTCCCCAGAGGAAAAA chr4 - 94230402 47073551 47073550 47073614 47156789 47156788 47156852 64 TCTTACAATTCTGTGTTGTTGGTTTTTTGTTTGTTTGTTTTGTTTTTTTTCCACAGAGGAGAAA .:..x.x...:.x....x...x....x.x.......x:.:.x..x.......x.......:... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 110790334 79424221 +3972 chr4 + 190214555 157890469 157890468 157890563 95 CTCATACTACTTCTAAGAAG-AGGGCATTATTAATATCTTAATTTTACAGAAAAGAAAACTGAAGCACAGAGAGGTTAATTTATTCACCCAAAGCC chr4 - 94230402 10729167 10729166 10729262 83501141 83501140 83501236 96 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ....:.x...::..:x..:.-...xx....:..x:.x..:x.........:x::.........:.....x.x.......x.x...::....:..:. 20M1I75M 67/95 70.5% 96/94230402 0.0% 1/95 1.1% 147161302 43053253 +3050 chr4 + 190214555 157900155 157900154 157900255 101 TCTTCTGAGTCTTAGTAA-----------ACTCAGGTAAAA--GTAGTGTTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACA chr4 - 94230402 37362990 37362989 37363103 56867300 56867299 56867413 114 TCCTCTGTATCTCAGTTATTATTTATCATGTTCTGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ..:....x:...:...x.-----------::..x.:x....--.:.:::..x.:..:...:x.:......:..::.:.x......xx:.:.....:.:...:...x:....... 18M11I12M2I71M 67/101 66.3% 114/94230402 0.0% 13/101 12.9% 120537165 69677390 +3182 chr4 + 190214555 157900193 157900192 157900257 65 TTATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACA chr4 - 94230402 37363039 37363038 37363103 56867300 56867299 56867364 65 TTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ..:.:..:...:x.:......:..::.:.x......xx:.:.....:.:...:...x........ 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 120537154 69677401 +3642 chr4 + 190214555 157900194 157900193 157900275 82 TATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x...:.x..:x... 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 149504405 40710150 +3730 chr4 + 190214555 157900195 157900194 157900282 88 ATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATATACAGGA chr4 - 94230402 8395788 8395787 8395875 85834528 85834527 85834615 88 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x.:...x.::x...x.::. 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 149504407 40710148 +3995 chr4 + 190214555 157900197 157900196 157900283 87 ATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATATACAGGAA chr4 - 94230402 8395788 8395787 8395874 85834529 85834528 85834615 87 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x...:.x..:x.:.::.. 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 149504409 40710146 +3046 chr4 + 190214555 157900203 157900202 157900277 75 ATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATATA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..::.:..x...:.......:...:.:...:xxx:...:..x.xxx::......x...::...:.....:..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 103607049 86607506 +3004 chr4 + 190214555 157900207 157900206 157900279 73 ATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATATACA chr4 - 94230402 54293154 54293153 54293226 39937177 39937176 39937249 73 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATA ..::.:..x...:.......:...:.:...:xxx:...:..x.xxx::......x...:....:.......:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 103607053 86607502 +3460 chr4 + 190214555 157900214 157900213 157900284 71 TATATATATATATATATATATATATATATATATATACACACACACACACACATACATACATATACAGGAAG chr4 - 94230402 88147180 88147179 88147243 6083160 6083159 6083223 64 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-------CATATATAGGGAG ..:..:..x:x..............:.x.:.:...:.:.............-------......:...:.. 51M7D13M 51/64 79.7% 64/94230402 0.0% 7/64 10.9% 69753034 NA +3054 chr4 + 190214555 157955774 157955773 157955844 71 CATTTCATCTATATACATGTGTGTGTGTATATATATATGTATATATATATATGTGTGTGTATATATGTGTG chr4 - 94230402 70982612 70982611 70982682 23247721 23247720 23247791 71 CATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ...x.x.::.x.x.x.x.............:.:.:..::...:.x:...x.........:...:.::::.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 86973162 NA +3361 chr4 + 190214555 157955858 157955857 157955938 81 ATATGTATATATATGTGTGTATGTATATATATGTATATGTATATGTATATATGTGTGTATGTATATATATATGTATGTATA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.:.:.x.....x..x:x.......::..x:x...:.....x:.:.........:x..:.x:.....x.....:. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 76554565 NA +3115 chr4 + 190214555 157955865 157955864 157955932 68 TATATATGTGTGTATGTATATATATGTATATGTATATGTATATATGTGTGTATGTATATATATATGTA chr4 - 94230402 39267143 39267142 39267210 54963193 54963192 54963260 68 TATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATACA ....x...........x::::.::..xx.:...:.:........x.....:..x.:...:x....::. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 118688722 71525833 +3068 chr4 + 190214555 157955919 157955918 157955995 77 TATATATATATGTATGTATATATATATGTATGTGTATATATATATATATATGTATGTGTATATATATATATATATAT chr4 - 94230402 71926809 71926808 71926885 22303518 22303517 22303594 77 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATAATTTTAAAAATAT .........x...::...:...:.x....x...:....x...x..xx..:.:..x::...:...xx.x..x.x.... 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 86029110 NA +3012 chr4 + 190214555 157955936 157955935 157956014 79 ATATATATATGTATGTGTATATATATATATATATGTATGTGTATATATATATATATATATATATATATATATGTATGTA chr4 - 94230402 81401293 81401292 81401371 12829032 12829031 12829110 79 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTA ....x.x.:...x.....x..x.x.......:..:x:x..::..:..x:.:.:.:.:....x..:.x:.....x..... 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 76554643 NA +3069 chr4 + 190214555 157968570 157968569 157968615 46 TCTGTCATCTCATATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 3462443 3462442 3462488 90767915 90767914 90767960 46 TCTGTGGTTTCATATCACTTCCTTTTTTTTTTCTTTTTTTCTTTTT .....x:.:......:x...:...........:.......:..... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 154506127 35708428 +3285 chr4 + 190214555 157968579 157968578 157968638 60 TCATATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTAGTCTTGCTCTGTTGC chr4 - 94230402 5847636 5847635 5847695 88382708 88382707 88382767 60 TTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC .::.::....x.x:..............:.::.........x.:x.........:x.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 152120943 38093612 +3179 chr4 + 190214555 157972992 157972991 157973051 60 AATACTTTTTCCAAAAGTTAGTTTTTTGTTTTTGGTTTTTGGTTTTGGTCTTTTGTTTTT chr4 - 94230402 61946744 61946743 61946803 32283600 32283599 32283659 60 AGTATTATGTCAAAGGGGTTGTTTTTTGTTTTTGGTTTTTTGTTTTGTTGTGTTGTTTTT .:..:.x.x..x..::.x.x....................x......x.x.x........ 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 96026248 94188307 +3025 chr4 + 190214555 157973024 157973023 157973086 63 TGGTTTTTGGTTTTGGTCTTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTTTGAGATGGAGTTT chr4 - 94230402 47126208 47126207 47126270 47104133 47104132 47104195 63 TGATCTCTGGTGTTGGATTTTTGTTGTTGGCTTTTTTTTTTTCTTTTTTTCCACATGCAACTT ..:.:.:....x....x:.......x...x:...x.......:.......:x.x...x.::.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 110846816 79367739 +3287 chr4 + 190214555 157994570 157994569 157994717 148 ATATCACATACATA-----TATGTATATATGTGTGTCCTGTGTGTGTTCGTATATAAATAT---------ATATATTTGTA------TATATATATTTGTATATATATGTATATATATTTGTATATATATTTATATATATATATACACACACGTCAGTTTAATATATT chr4 - 94230402 37362955 37362954 37363119 56867284 56867283 56867448 165 ACATGACACACATAATCACCATAGATATATCTGAGTCCTCTGTATCTCAGTTATTATTTATCATGTTCTGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATAAAATATT .:..x...:.....-----:..:x......x..x.....x...:.x.:x..xxx..xx...---------.x.x.x...:.------.:..:...:.........:...:.:.x....x.xx:.:.....x.:...:...x:.:.....---:.xx..x...x..... 14M5I42M9I11M6I62M3D16M 100/145 69.0% 165/94230402 0.0% 23/145 15.9% 120631615 69582940 +3007 chr4 + 190214555 158013155 158013154 158013208 54 CTGAAAACAAACAAACAAAAAAAAACAAACAAACTTTAAAACCAAATTTTAATA chr4 - 94230402 34496494 34496493 34496547 59733856 59733855 59733909 54 CTTAAAACAAACAAACAAAAAAAACCAAACAAACATAAAAGGTATATTCCTATA ..x.....................x.........x.x...:x:.x...::x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 123516661 66697894 +4021 chr4 + 190214555 158073030 158073029 158073144 115 AGAAAGAAGGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAA------GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATAA chr4 - 94230402 30533164 30533163 30533284 63697119 63697118 63697239 121 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAA .:.x.:..:.:..........::.:.:......:...xx.x..:....x..------:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....:.::::..... 51M6I64M 75/115 65.2% 121/94230402 0.0% 6/115 5.2% 127539866 62674689 +3126 chr4 + 190214555 158073041 158073040 158073106 66 AAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237695 9237694 9237760 84992643 84992642 84992708 66 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.::.x.x..x::......:..:x..x.:...:.....:....:....:..:...:....::... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 148835346 41379209 +3075 chr4 + 190214555 158073059 158073058 158073141 83 GAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAA chr4 - 94230402 36858293 36858292 36858375 57372028 57372027 57372110 83 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAA ....:.x..xx.:x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::........ 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 121214766 68999789 +3644 chr4 + 190214555 158073129 158073128 158073206 78 GAAAGAAAGAAAATAAGAAAAGAAAGAAAGAGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGA chr4 - 94230402 40472541 40472540 40472618 53757785 53757784 53757862 78 GGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGA .:::....:....x..:.....:..:...:........:....:....:.:xxx::..:.x...::::.x.....:.. 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 117600588 72613967 +3656 chr4 + 190214555 158073159 158073158 158073302 144 AGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGAGGAAGGGGAGAAAGAGAGAAAGAAAGAGAGAAAGAAAGAGAAGGA-------------AGGCAGGAAGC-----CTGGCTCA-----CAATATTCTAAAGCAGTAGACCACACATAGTC chr4 - 94230402 76099077 76099076 76099243 18131160 18131159 18131326 167 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAGTACCAAACACAGAGGCTGGCAGCAGGTGCTAGCTAACCAGTCAGCACTCTCTAGCTGTAGATGTCACATAACC ..:::::...::....x.....xx...:.....:x.:.:::...:..:...:xxx...:.:.x::...:::....:x....:..x...x.:..-------------....x..x...-----..:...x.-----..::.:...xx...x.....:xx......::. 93M13I11M5I8M5I32M 92/144 63.9% 167/94230402 0.0% 23/144 16.0% 81974082 NA +3007 chr4 + 190214555 158078514 158078513 158078559 46 CCAGTTTGTTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGAGATTGT chr4 - 94230402 61211120 61211119 61211165 33019238 33019237 33019283 46 CCGGTTTTTGTGGGTTTTTTGTTTGTTTGTTTGTTTTAGCAAATGT ..:....x.x...........................x.x:.x... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 96867394 93347161 +3075 chr4 + 190214555 158078518 158078517 158078558 41 TTTGTTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGAGATTG chr4 - 94230402 76034096 76034095 76034136 18196267 18196266 18196307 41 TTTGTTAGGGTTTTTTGTTTGTTTGTTTGTTTTTTAGGGTG ......x...........................x..:x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 82044422 NA +3152 chr4 + 190214555 158092410 158092409 158092468 59 CCCCTGGGTTCGAGGGACTCTTCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .::........:..x.x:..x:xx.x........:............:.:....x.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 139895271 50319284 +3174 chr4 + 190214555 158125526 158125525 158125610 85 GTCTCCAAACTTTTGTTAGGCTAATTTTCATTAAGAGGATGATTTATAAGAGAAGAAAAGGATCTTAAAAATCCCAGAGACAGTG chr4 - 94230402 9847155 9847154 9847239 84383164 84383163 84383248 85 GTTTCTTAACTTTTGCTGAAGAGGTCTTCATTAGAAGTCTGATTTATTCAGGAAGAAGAACATCTTGCCAGTCACAGAGGCATTG ..:..:x........:.:::xx::.:.......::..xx........xx::......:.:x.....:xx.:..x.....:..x.. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 148278371 41936184 +3143 chr4 + 190214555 158141578 158141577 158141620 43 TCAGTGCCTTTGTATTTACCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 48657040 48657039 48657082 45573321 45573320 45573363 43 TCTGTACCTTTGTATTTGCTTTTTTTTTTTTTTTTTTTCTTCT ..x..:...........:.:..................:..:. 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 109484538 80730017 +3109 chr4 + 190214555 158192339 158192338 158192396 58 CCAGTTGTCCTGGCTGCCACAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCT chr4 - 94230402 12160764 12160763 12160821 82069582 82069581 82069639 58 CCTGTTGCCATGACCTCCAAAATTGTTGTTTTTTGTTTTTTGTTTTTTTTTTTTAACT ..x....:.x..:.:x...x.:.....x......x......x............x:.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 146031575 44182980 +3900 chr4 + 190214555 158214115 158214114 158214185 71 CAACCTCCACCTTTAGGGTTCAAGTGATTCTCATGTCTCAGCCTGCCAAGTAGCTGGAACTACAGGCACAC chr4 - 94230402 18197129 18197128 18197199 76033204 76033203 76033274 71 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:xx.x...:x...........x...x..x.x........x:..................x.::... 71M 55/71 77.5% 71/94230402 0.0% 0/71 0.0% 140016986 50197569 +3045 chr4 + 190214555 158255512 158255511 158255598 87 ATATATGTGTGTATATATATACACATTTATATATATGTGTGTGTATATATATATACACATTTATATATATGTGTGTGTGTGTGTGTG chr4 - 94230402 64944126 64944125 64944212 29286191 29286190 29286277 87 ATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG ...x..::..:..x...x.....x..x.:.......x....x.xx.:...x.x.x:.:x.x.....::x.x..:....:...:.:.. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 93311386 NA +3311 chr4 + 190214555 158255544 158255543 158255649 106 ATATGTGTGTGTATATATATATACACATTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATACACACACACACAGACCTCT chr4 - 94230402 64944124 64944123 64944224 29286179 29286178 29286279 101 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATG-----ATATAGTCCTCT .:..:x:.::.....x...x.....x..x.:.......x....x.xx...:.x.x.x.:.x...:.:..:x.x..:......:....::-----.:.:..x..... 89M5D12M 68/101 67.3% 101/94230402 0.0% 5/101 5.0% 93311420 NA +3005 chr4 + 190214555 158255555 158255554 158255615 61 TATATATATATACACATTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704277 19704276 19704337 74526066 74526065 74526126 61 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x...:.....:..:.x.....x.:...:...x::..............x:.x.xx.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 138551278 51663277 +3031 chr4 + 190214555 158255602 158255601 158255642 41 GTGTGTGTGTGTGTGTGTGTGTATATATACACACACACACA chr4 - 94230402 58118595 58118594 58118635 36111768 36111767 36111808 41 GTGTACGTGTGTATGTGTGTGTATATATACGCACAGGCACA ....::......:.................:....x:.... 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 100137007 90077548 +15163 chr4 + 190214555 158294040 158294039 158294900 861 TGCAGACCTCTTTCTAATAATGGCCACTGTTATTATCCCTCCCCTAACCCTGACCTGGCTCTTTCAAGATCCAATTTGGGTAGAACAGTAGCCTTTAAAGGGAGAGAAATT---ACAAGGCCATGAATTAGTTGAGGAGCAATTAAAAGCTGGCCATATAGAACCATCAAACAGCTCTTGGAATTTGCCCATTTTCATCATTCCCAAAAGGTCTGGCAAGTGGAGACTTTTGCATGACTTATGGGCTATCAATGCTAATTTGCAACCTGTGGAGACCCTTCAACAGGGCCTCCCTTCCCCCATGATGATTCCTCAAGATTGGCCTATAGTCATTATTGACTTAAAAGACTGCTTTTATACTATTCCCCT---TGCACAGGACAGAGAAAAATTTGCATTTATAATACCAGCTATCAATAATGAAAGGCCAGCTCACCAATTTCATTGGAAAGTGCTTCCTCAAGGAACGCTAAACAGTCCTACCATGTGTCAGTATCACGTAAACCAGGCTTTGCTCCCCAGTAGAAAAGAATTTTCTAATTGCAGGATTATTCATTTGATGGATGATATTTTACTGGCAGCCCCAACAGAGCCAGTACTTTTA---------AGTTTGTATGCCTCTGTCATAAAGAATATACAGTTAAGAGGTTTAATCATAGCACCTGAAAAAGTACAAATGTCCTCTCCTTGGAAATATCTTGGAT----ACATACTAAGATATTCCCAGTCAGTAAGACCTCAAAAGGTTAAATACTAGCAGCTTACAT----ACCTTAAATTATTATCAAAAATTACTAGGTGATATTAACTGGCTTCATCCCACCTTGGGCATAACTACTGATAAGTTGCAAAATCTGTTTTCTATCCTAAAGGGCA chr4 - 94230402 14268279 14268278 14269141 79961262 79961261 79962124 863 TGAACACCCTTTTAGGATAACGGCCATTGCTTGGACTTTCCCGCTGCCACTTACATGGACTACGAACAACCCGGTTGTGGTTAAGCAATGGCCACTAAAACGGGAAAGTCTTCTACAAGCACATCAGTTAGTGCAAGAACAATATACTCAGGGTCACCTGAAGTTGTCCACCagcccatggaacaccccaatatttgtgattcaaaagaaatccgggaagtaccgtctgctgcacgacttaagagctgttaatgatcagatggaacccatgggggctcttcaacccggcctgcctaatcctgccatgttacctgaagactggcctatccttatcatcgacctcaaggactgttttttcacaattgctttacacccccaagatacgaaatgttttgcctttaccttaccggcaataaataggggggagcctgataagcgcttcgaatggacagtcctaccacaggggatgcgtaactccccaactatttgccagttgtatgttgatgctgctttacaaccgctacgtaaagaaatgcccaacactatcatctaccattacatggatgacattctcttcgc----ccagcaggatccGT----TTACGGAGCAGCAGATTGAACGC----GTCAAAACAGTTCTAGCGGAATTCTCTTTGGTGGTTGCTCCTGAAAAGGTGCAAAGGTCTGCACCTTGGAAATATCTCGGATGGCAAATTACAGGGA-------AGCAAGTAACACCACAAAAATT--GACTCTAGCTACTGACATCGCCACACTGAATGATGCACAAAAGCTCCTCGGAGACCTACAATGGTTGAAACCGGTCGTAGGTCTCCCCAATACATTATTAGAAAAACTAATGCCCCTGCTAAAGGGTA ..x.x...::...xx:....:.....:..:.xxx.:::::..x..:x.x..x..x...x::x:xx.x:.:..::..xx...x:.:..:.:...x:....:x.:..:.:x:.---.....xx...x.:.....xx.:..:....xx.xxxxx..:..:x.::.::::..x.x....:.x.....:x:x..x..x..::.x....xx..:.::..:..x....:xx.x..x:....:......x.:...:.:....x.x.xx..x....::...:.:.:.......xx.....x...xx:..:::x...x.x...x....:........xx.:..:..:...:.x..:.....:....x:..x...x.::.---:x.x..:..:.x::..x:x.....x....:xx....:..x..x....:x.::::...x.x.x.x.:x..:x.x....x...x..x..x..:..:.:..xx...xx:..x..:..x..:....xx:.:..x:.:xxx.....:.xx..xxxxx.x......x.x:.:..:xx:.xx..:xx:....xx........:...:.x:.x..----...:...:::.x..----...---------..x...x.:..----....x..x::x.x..xx.xx.xxxxx...::.x:.x..x........:..:....x...:x.x..............:....----.xx...x::..-------..:x.....x...x.....:x.--:.:x.....x:..x....----..x:.:...x..xxx.....::.x..x..x..:x.xx.x...:.xx.x..x::.x.:..:x.xx.:.x.:xxxx:..:x....x..:x.x:.:x.x........:. 111M3I255M3I207M4D14M4D3M9I11M4D82M4I11M7D22M2D18M4I106M 503/840 59.9% 863/94230402 0.0% 44/840 5.2% 144025761 46188794 +3461 chr4 + 190214555 158348079 158348078 158348163 85 CTGCAGACTCAAACTCCTGGGTTCAAACAATCTTCTTGGTTCAGCCTCCGGAGTAGCTGGAACTACGAGAGTGTGCATCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC----ACGTGCACCACTGTG ..:...x.:x..:..:..........:::x.::x.xx..:.......::x:...............----::.....:...::.. 66M4D15M 56/81 69.1% 81/94230402 0.0% 4/81 4.9% 140150953 50063602 +3050 chr4 + 190214555 158372603 158372602 158372656 54 CTATCAGAGAATAAGTTCCTGTTATTTTTTTTCTTTTCTTTTCTTTTTTTTTTT chr4 - 94230402 11187440 11187439 11187493 83042910 83042909 83042963 54 CTATTGGAGTATTGGGTCTTGTTGGTTTTTTTCTTTTTTTTCCTTCTTTTTTCT ....::...x..x:.x..:....:x............:...:...:......:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 147185163 43029392 +3866 chr4 + 190214555 158385601 158385600 158385743 143 TCTCGTGTGTATATATATATATATATATACACATGTATATGTATGTATACATATATATATGTGTATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACA chr4 - 94230402 73121097 73121096 73121213 21109190 21109189 21109306 117 TCTCGTGTGCATGCATATTCATACACATA------------------TACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACG--------CCCACAGAGACACACATGTATAAGCA .........:..::....x:...:.:...------------------....:.x.x::...x...:...::....x:....:.x:...:.:..x:........x...:.--------.x....x.x.......:::.:.::.. 29M18D62M8D26M 81/117 69.2% 117/94230402 0.0% 26/117 22.2% 85264504 NA +3108 chr4 + 190214555 158385606 158385605 158385650 45 TGTGTATATATATATATATATATACACATGTATATGTATGTATAC chr4 - 94230402 64433220 64433219 64433264 29797139 29797138 29797183 45 TGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .....:.........x..:.:.......:.:...:........:. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 93952386 NA +3804 chr4 + 190214555 158385612 158385611 158385742 131 TATATATATATATATATACACATGTATATGTAT-GTATACATATATATATGTGTATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGAC chr4 - 94230402 14964760 14964759 14964884 79265519 79265518 79265643 125 TACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT-------TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.x.x..::..x.:.....x::x.x.x.:.x-..::.:x......x.x....-------.:.:x.:...x:...:.x.::..:.:..:.::.:............xx........::..........x.. 33M1I20M7D71M 82/124 66.1% 125/94230402 0.0% 8/124 6.5% 143420852 46793703 +3745 chr4 + 190214555 158385615 158385614 158385760 146 ATATATATATATATACACATGTATATGTATGTATACATATATATATGTGTATA---------------TATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGC---TGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT---TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..:....x.....x:..:---..x::::x....x.x..::..x....:.---------------.::..x......x.x..:.---.:..x.:...x....:.x..::.:.:.....::::.:::.:.:...xx..x.....::............. 22M3D28M15I19M3D71M 92/140 65.7% 155/94230402 0.0% 21/140 15.0% 143420885 46793670 +3327 chr4 + 190214555 158385617 158385616 158385764 148 ATATATATATATACACATGTATATGTATGTATACATATATATATGTGTATATATATATATA---------TACATGTATATGTATGTAT---ACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTG-----CTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..:....x.:...x..:-----x..x::..x..:.x.x...::.x.:..:.:x:.x.---------.:...x.....:x.x..:.---:x.:.:.x......x.:::::::.....::::.:::.:.:....x........::............. 21M5D35M9I19M3I68M 89/143 62.2% 155/94230402 0.0% 17/143 11.9% 143420887 46793668 +3061 chr4 + 190214555 158385620 158385619 158385691 72 TATATATATACACATGTATATGTATGTATACATATATATATGTGTATATATATATATATACATGTATATGTA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:..:x...:.x::...:...............:::.:..::xx.....x.:x.....:::...x...:.. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 105904384 84310171 +3672 chr4 + 190214555 158385659 158385658 158385743 85 ATGTGTATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTAT--TTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......:...:.:.::...x........--x..::...::..::x..:..xx...:...............x.....x.:::.:. 28M2D55M 59/83 71.1% 83/94230402 0.0% 2/83 2.4% 149989871 40224684 +3127 chr4 + 190214555 158385660 158385659 158385723 64 TGTGTATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x.:..........:.:.x:...:.xx:::.....:.:.:.:...x........ 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 121022620 69191935 +3107 chr4 + 190214555 158385664 158385663 158385737 74 TATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:.:.:...:.:.::.:.x::..:.:.x.::...::...::x..::.xx...................x..... 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 149989875 40224680 +3088 chr4 + 190214555 158385665 158385664 158385734 70 ATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..:.::........x:...x.xx...x.:..........:...::x.:.x...x.......:.:x:.... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 134249472 55965083 +3773 chr4 + 190214555 158385665 158385664 158385741 77 ATATATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGA chr4 - 94230402 8395788 8395787 8395864 85834539 85834538 85834615 77 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ..:.:.:...:.:.:...:x.:......x..:.:..:...::x.::..xx.:.................x.....:. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 149989877 40224678 +3618 chr4 + 190214555 158385669 158385668 158385745 77 ATATATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTA--CATTAATACACACACACACACACAGACACA ..:.:.:...:::..:...x::......x:.:....:....:x..--..:xx.:....................... 45M2D30M 55/75 73.3% 75/94230402 0.0% 2/75 2.7% 149989881 40224674 +3253 chr4 + 190214555 158385673 158385672 158385747 75 ATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::....:.:::..x::..::..x..:........::x:...:xx.:...............x.x..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 149989885 40224670 +3473 chr4 + 190214555 158385673 158385672 158385738 66 ATATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x.:....x.::..:..:.:..:.:...:...:..:.xx........::............. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 143420854 46793701 +3098 chr4 + 190214555 158385675 158385674 158385730 56 ATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACAC chr4 - 94230402 25393253 25393252 25393308 68837095 68837094 68837150 56 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x.x....:.:::.:.....::..:...x.:...:..:..........:..... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 132992422 57222133 +3240 chr4 + 190214555 158385675 158385674 158385739 65 ATATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.:.x..:.:.x..::...::...::.:...:.:....:.xx........::............ 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 143420856 46793699 +3229 chr4 + 190214555 158385677 158385676 158385732 56 ATACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACAC chr4 - 94230402 25393253 25393252 25393308 68837095 68837094 68837150 56 ATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACAC ...x.x:.:.:..:....:..::...:...x...:.:.............:..... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 132992424 57222131 +3524 chr4 + 190214555 158385679 158385678 158385753 75 ACATGTATATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::...:.....:..:...x.:..:...x.::....::.::.x:...:xx.:.........x.......x..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 149989891 40224664 +3133 chr4 + 190214555 158385684 158385683 158385760 77 TATATGTATGTATACATATATATATGTATATACACACACACACACACACAC---ACACAGACACACACACACACACACAC chr4 - 94230402 88147180 88147179 88147259 6083144 6083143 6083223 80 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACAC ..:.....x.x...:............x.:.::.::.:.............---.:.:..:x.x.x:..:.:.:xx.... 51M3I26M 54/77 70.1% 80/94230402 0.0% 3/77 3.9% 70238504 NA +3224 chr4 + 190214555 158385687 158385686 158385801 115 ATGTATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACACACACACACACACACACACACACACTAGACAATAAG chr4 - 94230402 8395788 8395787 8395900 85834503 85834502 85834615 113 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA-AAAAACCCAAAC-TACATTCTGGCAAATAAG ....:.....:::.::...x.::.:...x:...:.:::.::.x:...:xx.:.x...............x.....x.::x.:.-.x.x..x..x..-:...:x..:.xx...... 83M1D12M1D18M 72/113 63.7% 113/94230402 0.0% 2/113 1.8% 149989899 40224656 +3082 chr4 + 190214555 158385691 158385690 158385765 75 ATGTATACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....:.::..:.:.::..:x.:..::.:x:...:.:::.::.x:...:x:.:.................x..... 75M 47/75 62.7% 75/94230402 0.0% 0/75 0.0% 149989903 40224652 +3056 chr4 + 190214555 158385697 158385696 158385771 75 ACATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::.:.:...:...::...x...:::.:x:...:.:::.::.xx...:xx.:.................x..... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 149989909 40224646 +3014 chr4 + 190214555 158385698 158385697 158385773 76 CATATATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:.....:.::.:.x...:::.:x:...:.:::.::xx:...:xx.:.................x..... 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 149989911 40224644 +3065 chr4 + 190214555 158385703 158385702 158385777 75 ATATATGTATATACACACACACACACACACACACACAGACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.....:.:::..:.x...:::.:x:...:.::x.::.x:...:xx.:.................x..... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 149989915 40224640 +3209 chr4 + 190214555 158392267 158392266 158392358 92 ATATATATATATATACACACACACACACATATATATACATATATATGTGTATATGTATATATGTGTATATGTGTATATATGTGTGTGTGTAT chr4 - 94230402 4417343 4417342 4417434 89812969 89812968 89813060 92 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..x..x.:...................x:x.:...::...:x:x:.x..:.:......xx.x.::.x..x:.:..:.:..:.x.:.x.:... 92M 59/92 64.1% 92/94230402 0.0% 0/92 0.0% 153974924 36239631 +3041 chr4 + 190214555 158392270 158392269 158392340 71 TATATATATATACACACACACACACATATATATACATATATATGTGTATATGTATATATGTGTATATGTGT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..::.:.:.........x.....:...:x.x.:....::.:.:.x.::..:..x:...:..... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 86762135 NA +3538 chr4 + 190214555 158392272 158392271 158392342 71 TATATATATACACACACACACACATATATATACATATATATGTGTATATGTATATATGTGTATATGTGTAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..::.::..:..:.:.........x.....:.:..x.x.:.:..:..:...x.::.....x........:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 86762137 NA +3062 chr4 + 190214555 158392330 158392329 158392411 82 TGTATATGTGTATATATGTGTGTGTGTATATATGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTATATATATAGAGAGA chr4 - 94230402 68323944 68323943 68324025 25906378 25906377 25906459 82 TGCGTAGTTATGTATAAGCATGTGTTTATATATGGATAGAAGTGTGCACGTTTACATGTATGCAGACAGATATGTAAAGAAA ..::..xx.:.:....x.::.....x........x:.:x:x.....:::..x.::.......:.x::.x....:..:...:. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 90068386 NA +3129 chr4 + 190214555 158413413 158413412 158413479 67 CATCATATATATATATATATATATATATATATATATATATATATATATATATATACATACACACACA chr4 - 94230402 37363037 37363036 37363103 56867300 56867299 56867366 67 CATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ...::.:..:...:x.:......:..::.:.x......xx:.:.....:.:...::..x........ 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 121050376 69164179 +3260 chr4 + 190214555 158413416 158413415 158413496 81 CATATATATATATATAT-----ATATATATATATATATATATATATATATATATATACATACACACACACACATACACACACACAC chr4 - 94230402 14964797 14964796 14964882 79265521 79265520 79265606 86 CATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACAC ...x......x.x:.:.-----.:.:.x....:.x.:::.:.::.:.::.:...:..:.....xx.........:........... 17M5I64M 56/81 69.1% 86/94230402 0.0% 5/81 6.2% 143448619 46765936 +3696 chr4 + 190214555 158413416 158413415 158413489 74 CATATATATATATATATATATATATATATATATATATATATATATATAT--ATACATACACACACACACATACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:...:.:.::...x.:..:...x..:....:...::x..:..--.....:.............x..... 49M2I25M 55/74 74.3% 76/94230402 0.0% 2/74 2.7% 150017629 40196926 +3135 chr4 + 190214555 158413418 158413417 158413485 68 TATATATATATATATATATATATATATATATATATATATATATATATATACATACACACACACACATA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx...:.:...:.........x...:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 150017623 40196932 +3882 chr4 + 190214555 158413419 158413418 158413501 83 ATATATATATATATATATATATATATATATATATATATATATATATATACATACACACACACACATACACACACACACGTACA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.::...x.:..:...x..:....:...::x..:..xx...............:...x.....x.:.x.:. 83M 58/83 69.9% 83/94230402 0.0% 0/83 0.0% 150017631 40196924 +3726 chr4 + 190214555 158413423 158413422 158413496 74 ATATATATATATATATATATATATATATATATATATATATATATACATACACACACACACATACACACACACAC chr4 - 94230402 8395788 8395787 8395861 85834542 85834541 85834615 74 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..:.:.:...:.:.::...x.:..:...x..:....:...::x.....xx.:.........:.......x.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 150017635 40196920 +3199 chr4 + 190214555 158413424 158413423 158413494 71 TATATATATATATATATATATATATATATATATATATATATATACATACACACACACACATACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.:.:.x....:.x.:::.:.::.:.::.:...:........xx........::..:.......... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 143448610 46765945 +3471 chr4 + 190214555 158413433 158413432 158413507 75 ATATATATATATATATATATATATATATATATATACATACACACACACACATACACACACACACGTACATACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x..:...::..::.x:...:xx..............::...x..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 150017645 40196910 +3080 chr4 + 190214555 158413436 158413435 158413502 67 TATATATATATATATATATATATATATATATACATACACACACACACATACACACACACACGTACAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:......:......x.:......:x...::::.x........:::....:.::.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 110246398 79968157 +3338 chr4 + 190214555 158413437 158413436 158413511 75 ATATATATATATATATATATATATATATATACATACACACACACACATACACACACACACGTACATACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...:.:.::...x.:..:...x......:::.::.x:....xx.:........::...:...x..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 150017649 40196906 +3164 chr4 + 190214555 158413440 158413439 158413510 71 TATATATATATATATATATATATATATACATACACAC--ACACACATACACACACACACGTACATACACACAC chr4 - 94230402 55098586 55098585 55098658 39131745 39131744 39131817 73 TGTATATATGGATAAATGCATCTAAACACATGCACACTTACACACAGAAACAGACACACTTGCGTACAAACGC .:.......:x...x..::..x..x.:....:.....--.......x.x...x......x.:.:....x..:. 37M2I34M 53/71 74.6% 73/94230402 0.0% 2/71 2.8% 103314854 86899701 +3016 chr4 + 190214555 158413451 158413450 158413516 66 ATATATATATATATATACATACACACACACACATACACACACACACGTACATACACACACACACAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..:.:...:.:.............:x:.x::x..x..::.....xx..:..:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 91508604 NA +3032 chr4 + 190214555 158413451 158413450 158413524 74 ATATATATATATATATACATACACACACACACATACACACACACACGTACATACACACACACACATACATACAC chr4 - 94230402 8395788 8395787 8395861 85834542 85834541 85834615 74 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC ..:.:.:...:.:.::.:.x...:::.:x:.....:::.::.x:..:.xx...............:...x.... 74M 47/74 63.5% 74/94230402 0.0% 0/74 0.0% 150017663 40196892 +3342 chr4 + 190214555 158424250 158424249 158424307 58 TAATATTTTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735340 92735339 92735397 1495006 1495005 1495063 58 TAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT ...:x.:..::....x.....:...:..:.:........x......:.x......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 65688910 NA +3345 chr4 + 190214555 158424255 158424254 158424307 53 TTTTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735347 92735346 92735399 1495004 1495003 1495056 53 TTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ..x:....x.....:...:..:.:...............:.x.........:. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 65688908 NA +3004 chr4 + 190214555 158428339 158428338 158428384 46 TGAGATACACAAAAAAAAAAAGAAAGAAAAAAAAGAAAAAAAAAAC chr4 - 94230402 32671783 32671782 32671828 61558575 61558574 61558620 46 TGACATGAACAAAAAGAAGAAGAAAGACAAAAAAGAGAGAAAAAAC ...x..:x.......:..:........x........:.:....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 125756556 64457999 +3296 chr4 + 190214555 158448415 158448414 158448500 86 TACATATATGTATATATATATGTGTATATATATGTTTATATATG--TGTGTATATATGTGTATATGTGTGTATATATGTGTATATGTG chr4 - 94230402 71630135 71630134 71630222 22600181 22600180 22600268 88 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ...:.::...:.....:.:.::::x.....:..:...x.:....--.....x.::.....x..........x.x:x..x:.x.x.... 44M2I42M 59/86 68.6% 88/94230402 0.0% 2/86 2.3% 86818280 NA +4026 chr4 + 190214555 158448486 158448485 158448572 87 ATATGTGTATATGTGTATATATATGTATGTATATATATTTGTATATATATGTGTGTATATACACACACACACACACACAATGGAATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATAT----GTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.......:....:...x.:......x..:....----....::x..::.xx:..:.:.............x......xx..... 36M4D47M 63/83 75.9% 83/94230402 0.0% 4/83 4.8% 150052698 40161857 +3729 chr4 + 190214555 158448496 158448495 158448562 67 ATGTGTATATATATGTATGTATATATATTTGTATATATATGTGTGTAT--ATACACACACACACACACA chr4 - 94230402 8395788 8395787 8395856 85834547 85834546 85834615 69 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA ......:...:.:..:..:x.:..:.....::....:....:x.::..--................... 48M2I19M 52/67 77.6% 69/94230402 0.0% 2/67 3.0% 150052708 40161847 +3135 chr4 + 190214555 158448502 158448501 158448559 58 ATATATATGTATGTATATATATTTGTATATATATGTGTGTATATACACACACACACAC chr4 - 94230402 25393253 25393252 25393308 68837095 68837094 68837150 56 ATAAAAATGTGTGCATGTGTAT--GTATGTATTTGTGTGTACACACACACACGCACAC ...x.x....:..:..:.:...--....:...x........:.:........:..... 22M2D34M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% 133055249 57159306 +3005 chr4 + 190214555 158467808 158467807 158467864 57 AAAAAACAAACAAACAAACAAAAAAGAATGTTGAATATTGGCCCCCACTCTCTTCTG chr4 - 94230402 80284937 80284936 80284993 13945410 13945409 13945466 57 AAAAAACAAACAAACAAACAAAAAAAATCATTAGATTTTTGCCATTGCTTTTTACTG .........................:.x::..::..x..x...x:::..:.:.x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 78182871 NA +3505 chr4 + 190214555 158492063 158492062 158492151 89 TCTTTTTTTCTTTCTTTCTTTCTTTCTTTGTCTTTCTCTCTCTCTCT----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCTTCTTTCT chr4 - 94230402 43081932 43081931 43082024 51148379 51148378 51148471 93 TCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..:....:::...:.....:..x::..::..x..:.x:.::xx:...----:...x.:...:...............x.xx:........... 47M4I42M 61/89 68.5% 93/94230402 0.0% 4/89 4.5% 115410131 74804424 +3175 chr4 + 190214555 158554614 158554613 158554658 45 GGTTTCCTTTTTTGTTTTCTTTTGTGTTTTGTTGTTTAATTTTAC chr4 - 94230402 42359599 42359598 42359643 51870760 51870759 51870804 45 GGTTTTCTTCTTTGTTTTCTTTTCTGTTTTGTTTTTTAGTGTTAC .....:...:.............x.........x....:.x.... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 116195015 74019540 +3746 chr4 + 190214555 158612686 158612685 158612756 71 CCACAACCCCCGCCTCCTGGGTTCAAGCCATTCTCCTGGCTCAGCCTCCCAAGTAGCTGGGATTACAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG .:...:...xx:x..:...........:xx...x.xx..........::...........:.:....x... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 140415560 49798995 +9966 chr4 + 190214555 158644889 158644888 158645143 255 ACTTTCTCTTTGTACACCAGATATTTTAAGAAATTCCAGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGT-ATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGAG chr4 - 94230402 93661525 93661524 93661774 568629 568628 568878 250 ACCTTCCCCCTG-----CAGCTACTTCAAGAAGTTCCAGTACTGCAGCTCTGCTCCCCACGTGCGCAGCTGCAAACCCAACACCGACGGCATCTCCTCCTTCGAGCACCTCCTGGCCAACATCATCCTGCGTGTCTTTGTCTGGGTCATCGCCTGCA-TCACCTGCCTGGGCAACCTCTGTGTCATCTGCATGCGGTCCTGCGTGGTCACGGAGAGCAGCGCACACACCATGGCCATCAAATCCCTGTGCTGTGAG ..:...:.::..-----...x..:..:.....:...........::.x.x...x..x..:..x........:.....x.....:..:..x..:..x..::.x...x.:...:....x.:...:..:.x.x.x..x...........::.-::.....-.:......:.x..x...x.:.x......:........::.:.:::.x:xxx.x....:..:xx:::.::.....x.x....xx..:..x......... 12M5D132M1I7M1D98M 173/249 69.5% 250/94230402 0.0% 7/249 2.8% 64983364 NA +11897 chr4 + 190214555 158646768 158646767 158647151 384 TTGTGAAACTATGACTCCTCT-AGGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGG-AAAATGCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGA chr4 - 94230402 93661841 93661840 93662225 568178 568177 568562 385 TCATGATGCTTTGCCTCCCCTCAGGTGCGGACGGCCTGATGGGCATCTATCTTTTTGTCATTGGTGCCTTTGATCTGAAGTACTCAGGAGAATACAACAGGCATGCACAGAGCTGGATGGCCAGTGTGCCATGCCAGCTGGTGGGCAGCCTGGCTATGCTGTCCTCTGAGGTGTCCGTGCTGCTGCTCACCTACATGACCCTGGAGAAATACTTGTCCATCGTGTTCCCCTTCAGCTACCGCAGAGCCGGCAGGAAGCAG-ACAGCCTCGGTGCTGGCTGCCATCTGGCTGCTGGGCCTCTCGCTCAGCATCGTGCCACTGTGCTGTAAGGAGTCCTTCGGCAACTACTATGGGAGGAACGGGGTGTGCTTCCCTCTGCAGTCCGA .::...x:..x..x....:..-......x...x..:.:.....x..x...:.x..:..x..:..x.x......:..:....x::xx...........:.:......:...xxx.......xx...::x.xx..:.....x..:..xxx::....:..x......x.x..:..:..x..x:.:...:.x..x.x:x....x:....:......x.x.x...:..x.x:..:..:..x.::xxx...x.:..-.::.x....-...:::x.:..x...::.x:...:...x.xx:x..::.:x::x.x:x:x..:.x...:..x..x:......:.::...::x...........x.xx..:..:..:...........x..x..x.. 21M1I228M1I9M1D125M 247/383 64.5% 385/94230402 0.0% 3/383 0.8% 64984927 NA +6538 chr4 + 190214555 158648497 158648496 158648719 223 AGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAA--------AAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCACTGCTTCAGGTAGAAATACCAGGT chr4 - 94230402 93662422 93662421 93662641 567762 567761 567981 220 AGGTTTGAACCTTGCAGCTTTCATCACCATTGTCTTTGCCTACACGGGCATGTTCTACTCTAT-----------CCGCATCACCACCTGCAGAACAGCGGAGAGTAACGTCTGCCCCCGGGACGTGGCTGTCGCCAAGCGCTTCTTCTTCATCGTCTTCACTGATGCTCTCTGCTGGATCCCCATCTTCCTGCTCAAGCTTCTCTCCCTGCTGCAGGTGGAAATCCCAGGT ....x.x..::.x..x..x..:....:...x..:...x....::x::.......:..:xx.:.-----------..::.x..x..x...x.:x..:.x:xx:...x.x:--------x::..x:..:::x.:.....:..:..:.....:..x..x..:........x:.x........x.....:..:x.:x.x..::....:..x.....x.....:.....x...... 63M11D35M8I114M 139/212 65.6% 220/94230402 0.0% 19/212 9.0% 64986075 NA +3704 chr4 + 190214555 158697938 158697937 158698027 90 TAAGTAAGTTTCATAATAAC--TGTGAAATAGGTA--------TATCTTTATTTTACAGATGAGAAAACTGAAGTCCAAATAAGTTAAACAACTTACCCA chr4 - 94230402 10729158 10729157 10729257 83501146 83501145 83501245 100 TGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA .:.x.x..::...:....x.--.....::......--------:.x..::.........:..:.........:.:x..x.:.:.....::..:..:.... 20M2I13M8I57M 65/90 72.2% 100/94230402 0.0% 10/90 11.1% 147968780 42245775 +3120 chr4 + 190214555 158724218 158724217 158724258 41 CCCCCCCCCCCCCAAAAAAAAGAAAAACAAAAAAATACTGT chr4 - 94230402 22571660 22571659 22571700 71658703 71658702 71658743 41 CCCCCCCCCCCCCAAAAAAAAGAAAAAAAAAAAAAGATAGT ...........................x.......x.:x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 136152558 54061997 +3379 chr4 + 190214555 158735227 158735226 158735326 100 CACACACCCACAAACACACACAC----CCACACACACACACAAACACACACACACACA--------CACACACCCACACACACACCCACACACGCACACAAACACACACACA chr4 - 94230402 89016087 89016086 89016198 5214205 5214204 5214316 112 CACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ......:.::..x:.........----x.:........::....::..:....::.x.--------..x....:::.:.......xx.::.::..x..::::.....x::.. 23M4I31M8I46M 66/100 66.0% 112/94230402 0.0% 12/100 12.0% 69719140 NA +3209 chr4 + 190214555 158737281 158737280 158737356 76 GGGAAGGGGAAGTGGAAGGGGAAGGAGAAGGAGGGAAGGAAGGGAGGGAAGGAAGGGAAGGAAAGGAGGGAAGGAA chr4 - 94230402 40472543 40472542 40472618 53757785 53757784 53757860 76 GGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGA .....::::...x::..::....::.:........::..::...:....xxx...:.:x.:...:..x.....::. 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 118264738 71949817 +3150 chr4 + 190214555 158737293 158737292 158737351 59 TGGAAGGGGAAGGAGAAGGAGGGAAGGAAGGGAGGGAAGGAAGGGAAGGAAAGGAGGGA chr4 - 94230402 4471673 4471672 4471731 89758672 89758671 89758730 59 TGGAAATAAAATGAGGAGGAGGGAGGGAAGGGAGCAGAGGAAGGAGTGGGAAGAAGAAA .....:x::..x...:........:.........x::.......::x..:...:..::. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 154265620 35948935 +3697 chr4 + 190214555 158737399 158737398 158737557 159 GGATTGAAGGAAGGAAGGGAGGGAGGAATAAAGAAAGAAAAGAAAGGATGGAAGGAAGGAAGTAAAGAAGGAAGGGAGGG------AGGGAGGGAGGGAGGGAGGGAG-GGAGGGAGGGAGAAAGGAAGAGCCTGGTGCGGTGGCTCATGGCTGTAGTACCAGCAC chr4 - 94230402 91538038 91538037 91538193 2692210 2692209 2692365 156 GGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGGCACAGAGCAC--------TGCAGTGGCTC--TGCCAAAGTGCAAACAC ...xx.x.:.......:x..x....:..x...x........:..x.x.:x.x.:.x..:..:..x....:...:x.:..:------..::..x:.xx:.x.....:..-...:.....x.x.:..x.x--------...:.......--x..::x...:.x.:... 80M6I22M1I19M8D11M2D17M 100/149 67.1% 156/94230402 0.0% 17/149 11.4% 67199361 NA +3086 chr4 + 190214555 158737404 158737403 158737488 85 GAAGGAAGGAA----------GGGAGGGAGGAATAAAGAAAGAAAAGAAAGGATGGAAGGAAGGAAGTAAAGAAGGAAGGGAGGGAGGGAGGGAG chr4 - 94230402 40245967 40245966 40246061 53984342 53984341 53984436 95 GAAGGAATGGACTTGGAGTTTGAAAAAGAAGAAAAAACAGATTAAAGAACAGATAGAAGGAAGGATCTCAACAAAGGAAGGAGGAAGAGACAGAG .......x.:.----------.::.::..:...x...x.:.xx......x:...:..........xx.x..x..:.:.:.....:..:..x:... 11M10I74M 59/85 69.4% 95/94230402 0.0% 10/85 11.8% 118491437 71723118 +3050 chr4 + 190214555 158745749 158745748 158745815 67 GGGAATACATTGCTATTTATTTATTTTTTTTCTTTTCTTTTTTATTTTTATTTTTATTGATCATTCT chr4 - 94230402 56101358 56101357 56101424 38128979 38128978 38129045 67 GGGTATATTTTGCCATTCCTTATTTTCTTTTTCTTTATTTTTTCTTTCTGTTTTTATTGCCTTTTCT ...x...:x....:...:x..xx...:....::...x......x...:.:.........x::x.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 102644391 87570164 +3271 chr4 + 190214555 158791264 158791263 158791329 66 TCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGG chr4 - 94230402 62053656 62053655 62053721 32176682 32176681 32176747 66 TCCTTTTTTTTTTTTTTTTTTCCCTGCATTTTCTTATCAAAGCCATGTTCTGTTCTGTCACATAGG .....................:::.x:x.......x.::.::.x:x..::..:........x:... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 96737608 93476947 +3549 chr4 + 190214555 158845123 158845122 158845213 91 TTTTTTCTAATTATAAAAGTATTGTAAAAGAAAAGCTCCTAAAAATATTAAGGAACATTTAGATATAGCACTTTTGAAACTGAAACTGAGC chr4 - 94230402 60112560 60112559 60112648 34117755 34117754 34117843 89 TTTTTTTTATACACAAAATTGTTGCAAAAGAAAAACTGATAATAGCATTAAGGAAAGTTTGA--ATGGTGCTTTTAAATATGATACTAAAC ......:..xx:.:....x.:...:.........:..xx...x.::.........x:...::--..:.::.....:..xx...x...:.:. 62M2D27M 62/89 69.7% 89/94230402 0.0% 2/89 2.2% 98732563 91481992 +3729 chr4 + 190214555 158867268 158867267 158867341 74 CTGCAACCTCTGGCTTCCAGGTTCAAGCAATTCTCCTGCCTTGACCTCTCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:.....::........::x...x.xx.x..:::...:............:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 140670142 49544413 +3114 chr4 + 190214555 158875963 158875962 158876012 50 GTGAAACCTTTGTATTATGTGTGTGTGTATTTATACACATGTGCACACAT chr4 - 94230402 10898940 10898939 10898989 83331414 83331413 83331463 50 GTAAAGCTTCTATTTTATGTGTGTATATATATATACACATATACACACAT ..:..:.:.:.:.x..........:.:...x.........:.:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 147977023 42237532 +3012 chr4 + 190214555 158883219 158883218 158883262 44 CCTTTGTGTGTGTGTGTGTTTTTTGTTTTTTTTGTTTTTTTGAG chr4 - 94230402 6995963 6995962 6996006 87234397 87234396 87234440 44 CTTTTTTGTGTGTGTGTGTTTTTTTTTTCTTTTGTATTTATGAG .:...x..................x...:......x...x.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 151887256 38327299 +3086 chr4 + 190214555 158947707 158947706 158947779 73 AAAAGTAGAACAAAAAGTCCGAGA-GATGGAAAAGACGAAAGAAATAAGAAAATAAGAGATTAAAATGTGTAAT chr4 - 94230402 56685349 56685348 56685421 37544982 37544981 37545054 73 AAAACCAAGACGAAAAACCCGAGACAATGGAGATGA-GGAAGAAATAAGCAAATAAGATGACAAAATGTTTGAT ....x:.::..:....::......-:.....:.x..-.:..........x........x:x:.......x.:.. 24M1I11M1D37M 54/72 75.0% 73/94230402 0.0% 2/72 2.8% 102262358 87952197 +3525 chr4 + 190214555 158968630 158968629 158968714 85 TTACTAGCTGTGTGGCCTCAGGCAAGGAACCTCACCTGTTGATACCTCAGTTTCCTCAGCTGTAAAATCATCACAGTACCATTCT chr4 - 94230402 11947208 11947207 11947292 82283111 82283110 82283195 85 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATACAATGCT .:....:.......:...:...:x..xx..:.x.:...::x:.::.:........:..xx.:.:....x..:.:.:...x..x.. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 147021422 43193133 +3055 chr4 + 190214555 158976751 158976750 158976810 60 TCCCAGGTTCAAGCAATTCTCCCATCTCAGCTTCTCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197140 18197139 18197199 76033204 76033203 76033263 60 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.::........::x...x.xx:x......:.:............:......x.::... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 140779611 49434944 +3101 chr4 + 190214555 158981779 158981778 158981842 64 TATGAAGAAACTGCATCAACTAATGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGCTAGCA chr4 - 94230402 10933948 10933947 10934011 83296392 83296391 83296455 64 TATAAATAGAATTTATAAACTACTTAGCCAAAAAAAAAAAAAGAAGAAGAAGAAAGAACTGACA ...:..x.:.x.x:..x.....x.x:..x.............:..:..:..:.....:..::.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 148047831 42166724 +3101 chr4 + 190214555 158987737 158987736 158987806 70 ACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATAAAAATAAAATAAAAA chr4 - 94230402 9789354 9789353 9789423 84440980 84440979 84441049 70 ACCTCCCCAGCAGGCACCTGTGCTCACAAACCCAGAGCAAAATGGCAATAAAATAGAAATAAAATAAGGA ....x.x..x::x....x...:.:.xx....::.:..:.x...:::.........:...........::. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 149198383 41016172 +3101 chr4 + 190214555 158988109 158988108 158988177 69 AACAGCTGTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGGCACATACACCCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:.x....xx.:...:x.:..::x.x....:.......x.....x:...:......:.:.x.:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 142604538 47610017 +3208 chr4 + 190214555 158997728 158997727 158997796 69 CTGCAGCCTTGAACTCCTGGGCCCAAATAATTCCCCCACCTCAGCCTCCTAAGTAGCTGTGATTACACG chr4 - 94230402 18197126 18197125 18197194 76033209 76033208 76033277 69 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG ..:.....:x:.:..:.....::...:.:x...x.xx:x........:::.........x:.:...... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 140800602 49413953 +3057 chr4 + 190214555 159037803 159037802 159037849 47 CACACACACACACACACACACACACATATATATATGTATGTATTTAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x....::......:....x... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 71665056 NA +3309 chr4 + 190214555 159046501 159046500 159046589 89 AGAATGTTAAATATTGAACT-TTCAGTTTTGGTGTTTTTTTGTTTGTTCATTTCTTGTTTTGTTTTTTGTTTGTTTGTTTGTTTTTTTAC chr4 - 94230402 30794953 30794952 30795041 63435362 63435361 63435450 89 AGGATGTTATTCCTCCAACTGTTTAGGTCAGAT-TTTTTCCCTTCAATCATTTTATGTCCTGATTTTTGTTTGTTTGTTTGTTTTTCCAC ..:......xx:x.:x....-..:..x.:x.:.-.....::x..::x......:x...::..x.......................::.. 20M1I12M1D56M 63/88 71.6% 89/94230402 0.0% 2/88 2.3% 128251548 61963007 +3107 chr4 + 190214555 159082422 159082421 159082493 72 ATCTAAATCTAACAATTCCACTTTTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 70982599 70982598 70982670 23247733 23247732 23247804 72 ATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTG ..x..x..:..x:x..x:x......:..:x...........:.......:::.:...x::.:x:........ 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 88099823 NA +3271 chr4 + 190214555 159102726 159102725 159103140 415 GGCGTGAGACAGTGGGGGACACTGCGTGAGGAAAGCCCTGCGCTTCTCTCCGGGGCACCAGGACTTGC-GCCCCCTCTTCGGG-TCCAGGCCGCGCGCGGGACCCGACAGCCCGGCCGAGGGCTCCGCGACCCACTTGCGGCCAGAGCGCTGCTCACCTGGGCGCCGCCGAAGGTGCCGCTCAGACGCGAGGGCGCGGCCGCTGGCGGGCGGGGAGCGGGGAGGCGGGACCCGGCGCGACGGGGCTGCCCCGCCCCCCGATGATGCGGCGGCCGCCGACTCGCCCCCAC-GCTGTCACTCATTCCTCACCATGGTTGCAGCACAAAGCAAC----------AAGCCCCAGAG-GCCGCTTCCTCCCTGAGGAGCGGCTCCGGCGGCCGGAGAAGGCGCAGGAGGAGGAAGAGGCGGAGGAAGAGGAGGG chr4 - 94230402 47460979 47460978 47461335 46769068 46769067 46769424 357 GGTTTGGGACAGGGCGAGCTCCCACCCGGAGAAACCTTGCTGCTTCCGTGCGGCCAGCCAGGCGCGGCTGCCACAGCCCCGACCTCCAAAACGCGGGCAGGA---------------AGGGGCCCCGGCACTCACTG------AGCGGGCTGGCGGCGTGCGCGCCGTC--------CACGCGGCCGTCGGGGTGCAGCTGCAGGTGG-------------AAGCCGATGCCCACCCGGCAGTACAgccg-gcccc--------------gccgccggcccgggcccgccgccgTCAGgga-----------ggagggagaggaagacgaggaggaggatgaaggcgcggagTGCC----CCCCGCCGGGCAGCCGCTCCCTCCGGCCGCGAGCGGGCAGGGAGAGGAAGAGGAGGAGGAAGAGGAAGG ..:x..:.....x.x.:.x:x.::.x:.::....x.::xx:.....:x.x...xxx:.....xx:x..-...x.xx.::..:x-....::x....x..:...---------------::....:...xx..:....x------..x.x....x:x:.x..x......:.--------.:.x.:.x..:x:...:..:..:..x..:..-------------.:..x.:xx..x:.x..:.:.x:.x...x-.....--------------.......:.:..xx...:.-..:....xxx.-----------..xx.x..x:x..::.:.x----------...x.x.:...-...----..:.x.:.:.x...x.....xx.x.x.x.x..:x.x.....::..........x............:.. 68M1I14M1I18M15D20M6D26M8D31M13D29M1D5M14D19M1I11M11D19M10I11M1I3M4D69M 216/343 63.0% 357/94230402 0.0% 86/343 25.1% 111641747 78572808 +3159 chr4 + 190214555 159121328 159121327 159121407 80 CCCCTCCCCTCCCCTCCCCTTCCTCTTCTTTTCTCTTTTTTCCTTTCCTTTCTGAGATAGGGTCTTCCTCTGTCTGTTGC chr4 - 94230402 20485625 20485624 20485695 73744708 73744707 73744778 71 CCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCT---------TTTTCCTTTAGCTTATGC .....x...:x...:....:.::..::...........:::.:..:.......---------.:.....:.:x..xx... 53M9D18M 51/71 71.8% 71/94230402 0.0% 9/71 12.7% 138635703 51578852 +3305 chr4 + 190214555 159128890 159128889 159128971 82 GAAGAGTGTGTGTATATATATACATATGGGGGGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA-------AATCTATTT chr4 - 94230402 89821247 89821246 89821335 4409068 4409067 4409156 89 GAAAATTCTCTGTTTGTTTCTTCTGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTT ...:.x.x.x...x.:.x.x.x.xxx.....::x:.........x.x.......................:..-------.....x... 73M7I9M 62/82 75.6% 89/94230402 0.0% 7/82 8.5% 69307643 NA +3508 chr4 + 190214555 159128933 159128932 159128984 52 TGTGTGTGTGTGTATATATATATATATATAAATCTATTTTAAGTATATTTTT chr4 - 94230402 19559296 19559295 19559347 74671056 74671055 74671107 52 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt .............:................x.x...x...xx.......:.. 52M 45/52 86.5% 52/94230402 0.0% 0/52 0.0% 139569637 50644918 +3193 chr4 + 190214555 159131080 159131079 159131116 37 TTTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629063 81629062 81629099 12601304 12601303 12601340 37 TTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..x........:......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 77502017 NA +3165 chr4 + 190214555 159131081 159131080 159131124 44 TTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982311 18982310 18982354 75248049 75248048 75248092 44 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:.x..............x.x...................::.. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 140148770 50065785 +3413 chr4 + 190214555 159131081 159131080 159131122 42 TTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982313 18982312 18982354 75248049 75248048 75248090 42 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:................x...................::.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 140148768 50065787 +3284 chr4 + 190214555 159131081 159131080 159131118 38 TTTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ............:.....x................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 77502019 NA +3376 chr4 + 190214555 159131083 159131082 159131120 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................................::.. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 140148766 50065789 +3272 chr4 + 190214555 159147735 159147734 159147784 50 TCATCTCCACAGAAAGATTCCAATTGTTGCTTTCTCCTTACTAGGTGTGT chr4 - 94230402 62792123 62792122 62792172 31438231 31438230 31438280 50 TCATTTCTATAGGAAAATTCCAATTATTGCCTTCTCCTTTCAAAGTGTGT ....:..:.:..:..:.........:....:........x.x.:...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 96355612 93858943 +3351 chr4 + 190214555 159171371 159171370 159171438 68 ACTCTTATTATTCCTATTTTACGGGTGGAGAGACTGAGCCACAGAGAGGTTGAGTGACTTGTTCAGGG chr4 - 94230402 10729193 10729192 10729260 83501143 83501142 83501210 68 ATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAG .:.x:...:.x::.:.......:.....::.:......x....x.x.....:...:.:...::...:. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 148442178 41772377 +3051 chr4 + 190214555 159178515 159178514 159178606 92 CTCCCTCTGACTTCTTTCCCATTAGCATGTATTATGCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTT chr4 - 94230402 18872015 18872014 18872100 75358303 75358302 75358388 86 CCCACTCTCTTTTCCTTGCCTTTATAAGATAGAATGTTTCTTTTTTTTTTTTTTTTTTGGTGAAACAAAA------TCTGTTGCTTGGGCTT .:.x....xx:...:..x..x...xx.x:..xx...:..:..................xx...:..::.:------.....::.:::..... 70M6D16M 59/86 68.6% 86/94230402 0.0% 6/86 7.0% 140306500 49908055 +3121 chr4 + 190214555 159195860 159195859 159195920 61 TCTTCAAACATACCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCAAGTAGGCTTAG chr4 - 94230402 46086257 46086256 46086314 48144089 48144088 48144146 58 TCTTCAGGTGT---TGTTTTTTGTTTTTTTGTTTTTGTTTTTTTTCCCCAAGAGTGCTCAG ......::::.---........x.......x.....x...............x:x...:.. 11M3D47M 47/58 81.0% 58/94230402 0.0% 3/58 5.2% 113109603 77104952 +3605 chr4 + 190214555 159198214 159198213 159198370 157 ATTCTTTCTTTTATTTTCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--------------CTTTCTT----------TCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTT chr4 - 94230402 19053883 19053882 19054061 75176342 75176341 75176520 179 ATTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTT--TTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTCTTCTATTTGCCCTTCCTTCTTTGTTTT ....:...:..xx:::..x..xx......:x.....:.:......xx.:...x:.....:...--...:.....:.x:...x.x..:.x..:x:.xx..x...x:.:.--------------x.x...x----------.:x..:.:..x...::...x.:.x:.........:..x.... 63M2D43M14I7M10I42M 102/155 65.8% 179/94230402 0.0% 26/155 16.8% 140144331 50070224 +3261 chr4 + 190214555 159198219 159198218 159198374 156 TTCTTTTATTTTCTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT--------------CTTTCTT----------TCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTTCTTT chr4 - 94230402 19053884 19053883 19054061 75176342 75176341 75176519 178 TTCCTTCCTTGTCCCTCATTAATTTCTTCATTCCTCTTTTTCTTGATTTTTACTTCCTCCTT--TTTTTTTCTCTGCTTCATACTCTGTTCACTGATTACTTATTCTAAGGAGTAGTTGTAATATCTGAAATAATGCATTGTTTTCTTGCTTCTTCTATTTGCCCTTCCTTCTTTGTTTT ...:..:x..x..::.:x..xx.......x..:..:.:.....:xx.:...x....:.:...--...:.....:.x:...x.x..:.x..:x:.xx..x...x:.:.--------------x.x...x----------.:x.......x..:::...x.::x:........:...x:... 62M2D43M14I7M10I42M 99/154 64.3% 178/94230402 0.0% 26/154 16.9% 140144335 50070220 +3082 chr4 + 190214555 159198243 159198242 159198312 70 TCTTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT ...:::....x.....:.x...:...:.x...::.....:::::.x......:..::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 113600530 76614025 +3019 chr4 + 190214555 159198245 159198244 159198309 65 TTCCTTTCTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ....x..:.............:...::....::::.:.::....:....x.xx..:::.:x.... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 93982579 NA +3062 chr4 + 190214555 159198254 159198253 159198309 56 TTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 10810509 10810508 10810564 83419839 83419838 83419894 56 TTCCTTCTTTTTCTTTCCTTGTTTATTTCACTCTTCTATTGCTCCTTGCTTTCTTT ...:....:...........x...x....x:....::x..x:.:...x........ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 148387745 41826810 +3283 chr4 + 190214555 159198260 159198259 159198386 127 CTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTCTCTTTC-CTTCCTTCCTTTTTTTCTTTCTTTCCTTCCTT chr4 - 94230402 23468146 23468145 23468273 70762130 70762129 70762257 128 CTTTTTAATGCCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT ..:...xx.x....:...:...:....:..:.:.::xx.x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx::.::x.:x......-....:..x:...:...:x..x......:..:. 95M1I32M 78/127 61.4% 128/94230402 0.0% 1/127 0.8% 135730114 54484441 +3534 chr4 + 190214555 159198274 159198273 159198435 162 CTTTCTTTCTTTCTTTCTTTC---------------TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--TTCTTTCTTTTTCTTTCTCTCTCTTTCCTTCCTTCCTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTCTCTCTTCCTCTCT-TCCTCTCTCTCTCTCTCTCTCTTT chr4 - 94230402 51102218 51102217 51102393 43128010 43128009 43128185 176 CTTTTTTTCTGtatttattataataaatattatCAATTTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTA----TTTCCTCTTCTCCTTTCCTCCATACCTTTTTATCTATTCATATCTGTTTTCTTTGCCCATCTGTGTCTTT ....:.....x.x...x..x:---------------...::..:x.::.:....:.x.::x::.x....--..x..........:.x......:.x.:xx.:...x----...:..:.::.:.:.....:.x.x....::.x...x...x.x...-.::...:.x:.:x...x.x..... 21M15I33M2I35M4D45M1I24M 103/158 65.2% 176/94230402 0.0% 22/158 13.9% 108096056 82118499 +3143 chr4 + 190214555 159210295 159210294 159210345 51 AAATATATTTGGTGTATTTCAGGGATACAAAGTAATTTGTAAAAATGATTT chr4 - 94230402 64439655 64439654 64439705 29790698 29790697 29790748 51 AAACACCTCTATTGTATTTCAGGGAAACAAATCAATTTATAAAAATGATTT ...:.:x.:.:x.............x.....x:.....:............ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 94770640 NA +3728 chr4 + 190214555 159254684 159254683 159254766 83 CTGCAACCCCTGTCTTCTGGGTTCAAATGATTTTCCCATCTCAGCGTCCCAAGTAGCTGGAACTACAGGCGTGTGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:...xx:x.............:..x..:x.xx:x......x.::..................--....::....:::. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 141057558 49156997 +3258 chr4 + 190214555 159281676 159281675 159281740 65 AAAAAAAAAAAAAAAGAAAAGGAAAAGGAAAATTGTTAATAGTTACAGTAATAATTAAAATTATT chr4 - 94230402 50064998 50064997 50065062 44165341 44165340 44165405 65 AAAAAAAAAAAAAGACAAAAAAAAGATGAACGTTTTTAATAAATCCAGTAATGGCTAAGATTTTT .............:.x....::..:.x...x:..x......:x.x.......:::...:...x.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 109216678 80997877 +3262 chr4 + 190214555 159330261 159330260 159330336 76 GTATATG----TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTAGTAATTAAACCTTTTCTTTG---TTACAGGGT chr4 - 94230402 36532061 36532060 36532143 57698260 57698259 57698342 83 GTATATGCAACTCTGTGTGTATGTGTGTGTGTGCATATGCAAGTAAAAGAGATAAGTGAACCCCTTCTTTGAAAATACAGGGT .......----.x.......:............::.:..:.x:..x.x.x::...x.:....::.......---x........ 7M4I60M3I9M 58/76 76.3% 83/94230402 0.0% 7/76 9.2% 122798200 67416355 +3160 chr4 + 190214555 159338011 159338010 159338118 108 TTGGGAGGCCACAGCAGGAGGATCACTTGAGGCCAAGAGTTTCAAGCCCAGCTTGAGCAACAAAGCAAGATGCTATATCTAAAAACAAACAAACAAAAACAAAAAACA chr4 - 94230402 71890418 71890417 71890507 22339896 22339895 22339985 90 TTGTAAAGCCAGGGCAAGAG--TCACCTGGAGA----------------AACATGGGCAAAAAAATGAGATGTTTATTCTAAAAACAAACTAAAACAAACAAAAAACA ...x:.:....x:...:...--....:..::.x----------------.:.x..:....x...:::.....:.xxx.............x..x.x............ 20M2D11M16D59M 66/90 73.3% 90/94230402 0.0% 18/90 20.0% 87447593 NA +3065 chr4 + 190214555 159340630 159340629 159340669 40 AAAAACAAAAACAAAACAAAAAATACCACCACCATCACCA chr4 - 94230402 19094150 19094149 19094189 75136214 75136213 75136253 40 AAAAAGAAAAACAAAACAAAAAACACCACCACCACCAACA .....x.................:..........:..x.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 140246480 49968075 +3135 chr4 + 190214555 159376493 159376492 159376585 93 AAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGCAAGCTAGCGCTAAAGCTTCCAGTCAACAGTAAGCTATTTATAGTTAATTTTCCAGGGAGT chr4 - 94230402 47635136 47635135 47635228 46595175 46595174 46595267 93 AAGGAAAAAAAAAAAAACCAACGAAAAACAACAAAACCACAACCAGTGCCTGCAGTAAAGAGTATGGCTTTCATAGTCATTTCTTTCGAGAGT ..::.............xx..x:...:....xx..:.:.xx:.:.:x..:.x....x..x....x.x:x..:.....:.x..:.::x.:.... 93M 60/93 64.5% 93/94230402 0.0% 0/93 0.0% 111741357 78473198 +3249 chr4 + 190214555 159377388 159377387 159377429 42 CTTAATTTCTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTGTG chr4 - 94230402 18929907 18929906 18929948 75300455 75300454 75300496 42 CTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ..x...................:.:..............x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 140447481 49767074 +3013 chr4 + 190214555 159377393 159377392 159377427 35 TTTCTCTCTCTCTCTCTTTCTTTTTTTTTTTTTTG chr4 - 94230402 18929914 18929913 18929948 75300455 75300454 75300489 35 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG .:.................:............... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 140447479 49767076 +3048 chr4 + 190214555 159386433 159386432 159386484 52 AAGAACAGAGAGAAAAAGATTGAAAAACAAACAAACAAAAAAAAAGAACAAA chr4 - 94230402 29321545 29321544 29321596 64908807 64908806 64908858 52 AAGGAGAAAGAGCAAATAATTTAAAACAAAACAAACAAAAAAAAAAAACAAA ...:.x.:....x...x:...x....xx.................:...... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 130064888 60149667 +3323 chr4 + 190214555 159391946 159391945 159392016 71 CCTTTCTTTCTTTTTCTTTTCTTTCTCTTTCTTTCCCTCTTTTCTTTTCTTTCTTTTCTGTCTCTTGCTTT chr4 - 94230402 68550737 68550736 68550807 25679596 25679595 25679666 71 CTTTTTTCCCTTGTTCTTTTTGACTTCTCTGTGTTCCGATTTTCTTTTTCTTCTTGTTTGTTTCTTGCTTT .:...:.::...x.......:xx::...:.x.x.:..xx.........::.....x.:...:......... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 90841209 NA +3049 chr4 + 190214555 159399739 159399738 159399786 48 TCTATGAAAACAAAACAAAACAAAACAAACCAACAAAAAAACAACCCA chr4 - 94230402 68654340 68654339 68654387 25576016 25576015 25576063 48 TTTAAAAAAGAAAAACAAAACAAAACCAACCAACAAACAAACAAACCA .:..x:...:x...............x..........x......x... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 90745399 NA +3521 chr4 + 190214555 159418270 159418269 159418315 46 AACACAAAAAAACAAAAAACAAACCAACAACAACAACAAAAAAAAC chr4 - 94230402 4027217 4027216 4027262 90203141 90203140 90203186 46 AATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAAC ..:.........x.......x..x...................... 46M 42/46 91.3% 46/94230402 0.0% 0/46 0.0% 155391053 34823502 +3102 chr4 + 190214555 159423234 159423233 159423295 62 GAGACTCTGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAATGAGCACGGCATACAGATTTGA chr4 - 94230402 31741127 31741126 31741188 62489215 62489214 62489276 62 GAGATACTGCTTAAGAGAAGGAAAAAAAAAAAAAAAAAAAGGAGCAGATCATATGCATTTAA ....:x...::.x.:.:..::...................x.....x:x....::x....:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 127682107 62532448 +3698 chr4 + 190214555 159430626 159430625 159430691 66 CTTCTGGGTTCAAGCGATTCTCCTGGCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..............:.x...x.xx.......:..::.:.........:.:....--.::....... 54M2D10M 51/64 79.7% 64/94230402 0.0% 2/64 3.1% 141233487 48981068 +3043 chr4 + 190214555 159436827 159436826 159436868 42 ATAAATGTGTGTGTATACATATATATGTATTGTATATATGTA chr4 - 94230402 86910638 86910637 86910679 7319724 7319723 7319765 42 ATAAATGTGTATATATACATATATATGTATTGTACAAATACA ..........:.:.....................:.x..::. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 72526189 NA +3070 chr4 + 190214555 159443231 159443230 159443286 56 CTGGGACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGATG chr4 - 94230402 89300922 89300921 89300977 4929426 4929425 4929481 56 CTGAGACTGTGTGATGGTGTGTTTGTGCGTGTGTGTGCATATGGGTGTTTTGAGTG ...:...:.....xxx......x....:.........::.:..x......x.::.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 70142309 NA +3184 chr4 + 190214555 159466353 159466352 159466407 55 TTTCCTTCCTTGCTTTCTTTCTTTCCTTCTTTCCTTCCTTCCTTTCTTTCTTTTC chr4 - 94230402 3338200 3338199 3338254 90892149 90892148 90892203 55 TTTTTTCCTTTGCTATCTTTGCTTCCTGCTTCTTTTCTTTCCTTTCTTGCTTTTC ...::.:.:.....x.....x:.....x...:::...:..........x...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 156128153 34086402 +3177 chr4 + 190214555 159468966 159468965 159469019 54 GAATTTGCTGCTGTTTTGGTTACTGCCCTTAAAATGCAGCATAAATTTTTTTTT chr4 - 94230402 64387340 64387339 64387393 29843010 29843009 29843063 54 GGATTTACTCCTGCTTTACTTACCGTTTTTAAAATGCAGCATCATTTTTTTTTT .:....:..x...:...:x....:.:::..............x.x......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 95081626 NA +3121 chr4 + 190214555 159473195 159473194 159473257 63 TGTCATTTTTGTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGACTCGCTCTGTT chr4 - 94230402 76182409 76182408 76182471 18047932 18047931 18047994 63 TGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ..::x.......:x::...xx........x............:...x.:..:x.:.:...... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 83290786 NA +3171 chr4 + 190214555 159473294 159473293 159473366 73 CTGCAACCTCCGCTTCCCAGGTTTAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGAATTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x:.:.::....:...:.x...x.xx.x........::.............:....x.::.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 141276168 48938387 +3159 chr4 + 190214555 159510379 159510378 159510429 51 TAGCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 47552677 47552676 47552727 46677676 46677675 46677726 51 TAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT ...:.:...::.x.x..x.:x............:................. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 111957702 78256853 +3018 chr4 + 190214555 159510392 159510391 159510432 41 CTGTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929907 18929906 18929947 75300456 75300455 75300496 41 CTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...xx.:.............:.:.................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 140580485 49634070 +3095 chr4 + 190214555 159510395 159510394 159510430 36 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...............:.................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 140580483 49634072 +3166 chr4 + 190214555 159510395 159510394 159510428 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929914 18929913 18929947 75300456 75300455 75300489 34 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 140580481 49634074 +3254 chr4 + 190214555 159517271 159517270 159517364 94 CTATATTCATAGAACTTTTACCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGTTTCTTTCATTGCGTAGAACTTCCATCAATATCTCA chr4 - 94230402 55612866 55612865 55612956 38617447 38617446 38617537 91 CCAGATTTTTAGGGTTTTTTCCATCTTTTTTTTTTTTTAACTTTTTTTTTCCTGATTGTTTCTCCACTT---CTGAACTCTTGTAAATCTTTCA .:.x...:x...:::....x...::.............xx:.........::.x.:.......::xx..---:x.....::::.x...x.:... 69M3D22M 61/91 67.0% 91/94230402 0.0% 3/91 3.3% 103904405 86310150 +3287 chr4 + 190214555 159518333 159518332 159518401 69 TATCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGTAAATGAGAAAGATGCAAGAAATGCTGGAAATCAGG chr4 - 94230402 22987020 22987019 22987088 71243315 71243314 71243383 69 TACTGGTATCAAAAAAAAAAAAAAAAAACAAATTAAAGCAGAATAGTTTAAAAAATACTTGAAATAAAG ..::x..x....................x...x....xx....x::.x:..:....:..x.....x.:. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 136531313 53683242 +3147 chr4 + 190214555 159525275 159525274 159525343 69 TAAAATTAAAAAAAAAAAAACAAAAAAAAAACCAAACAAACAAAAAAAAGAAAATGCAAGATGACTTGT chr4 - 94230402 87234917 87234916 87234985 6995418 6995417 6995486 69 TAAAATGAAAAAAAAAAAAACAACACACAAAACAACCCAAGTGAGGAAAAAAAATATAAAGTAAATTGT ......x................x.x.x...x...x.x..xx:.::...:.....::..::.:.x.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 72290358 NA +3060 chr4 + 190214555 159549883 159549882 159549968 86 CATTCTCACTATTACTTAAACTCTTTTCTTCTTCTTTTTTTGTCCTCCTCCTCCTTTTTTTTTTTTTTTCTTTTTTTCTTTTGAGA chr4 - 94230402 40193292 40193291 40193377 54037026 54037025 54037111 86 CATTATTGGAGTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCTCCAGA ....x.::xx:..::..x.x..:..:...:::.x.:....xx.....xx...:.x:.............:..:....:::.:x... 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 119356591 70857964 +3229 chr4 + 190214555 159581835 159581834 159581906 72 TTTTTAGTTATGTTCATATGTATGAACATATATATATATATACACACACACACACACACACACA-TATATGTA chr4 - 94230402 88147166 88147165 88147238 6083165 6083164 6083237 73 TTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATA .....xx..x.x..:.:.....x...:............:.x:::::.::.:............-:....:.. 64M1I8M 52/72 72.2% 73/94230402 0.0% 1/72 1.4% 71434669 NA +3169 chr4 + 190214555 159605437 159605436 159605496 60 ATATATATATATATATATATATATACACATATATATATGTATATATATGTGTGTGTGTGA chr4 - 94230402 65232556 65232555 65232615 28997788 28997787 28997847 60 ATTTATATATATACATACATATTGACTGATACATGTATGTGTATAAAAGTATGTATGTGA ..x..........:...:....xx..xx...:..:.....:....x.x..:...:..... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 94372881 NA +3134 chr4 + 190214555 159605445 159605444 159605495 51 ATATATATATATATATACACATATATATATGTATATATATGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704324 74526079 74526078 74526129 51 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTG ..x..x...:........::......x.:.....:.x:............. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 139901171 50313384 +3904 chr4 + 190214555 159605464 159605463 159605549 86 CATATATATATGTATATATATGTGTGTGTGTGATGTGTGTGTGTGTGTATATACATATGTATATATATATGTGTGTGTATATATAT chr4 - 94230402 70982596 70982595 70982681 23247722 23247721 23247807 86 CATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........x...x:..:.:xx.x.x.x:xx...........:...:.:.........x:...x..:......::..:.:.:.. 86M 61/86 70.9% 86/94230402 0.0% 0/86 0.0% 88622868 NA +3003 chr4 + 190214555 159605499 159605498 159605562 64 TGTGTGTGTGTGTATATACATATGTATATATATATGTGTGTGTATATATATATGTATATATATA chr4 - 94230402 8395789 8395788 8395852 85834551 85834550 85834614 64 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACA .......:.....::...x.:......x..:......:..:x..:..xx...:::.:.:.:.:. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 151209710 39004845 +3236 chr4 + 190214555 159605503 159605502 159605552 50 TGTGTGTGTATATACATATGTATATATATATGTGTGTGTATATATATATG chr4 - 94230402 66471242 66471241 66471291 27759112 27759111 27759161 50 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATATG ......:..:.......:::....:.:........x....x...:..... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 93134261 NA +20295 chr4 + 190214555 159607788 159607787 159608159 372 ATTTAGGCTGTGGTATT-AGAATCCAAAACATGGCTTGGATGGTATTTTGTGCCTATTA----------TTTCCTCAAATGATGCTAAAGTGAATTCATTAATTTTTAATCTGAAAACACTTTAATTAATTCAGAATGTGAAAGGTTAGTTTGAAAATAAGGTATGATACAAAGGGGATGGCAGGCACCCTGGTGCGCAGCAGATTGGCTCTGATCTTTTGCAATCCAAGTGAGAGGTTGTTGTTCTGTTATGGATGAAAAGGCTCATTATCTCAAAGATAATTGCCCAGATGCCATACCAGTGAGGTCACACTAAACAGGGCTGTGGTTTCTGAACCAAATATTTGAGCTAATTAACAGTTAAAGGTGTAGGGAACTATTTT chr4 - 94230402 70886160 70886159 70886536 23343867 23343866 23344243 377 ACTCAGGCAGGGATATTTAAGATCCAAATTACCACTCAGATGATACCTGGTGCTTATTAGCCCCCCTCTCCTCCCCCTATGCTGCTAAAGCAGATTCATTACTTTTTAATCTAAAAACA-----ATTAATGCAAGATGTGAAAGGTTAGGTTTGAAATAAGGTGTGATACGAAGGGGATGGCAGGCACCCTGATGAGCAGCAGATTGGCTCTGATCTTCCACAAGCCGAGTGTGATGTTGTTGTTCTGCTATGGATGAAGGGGCCCATTATCCCGAAGATAATTGCCCAGATGCCACACCGATGAGGTCGCGGGAAACTCAGCCGCGGTTGCTGAACC-GGTATTGCAGCTAATTAACGCTTAAGGCTGCGGGCAGCCATTTT .:.:....x.x.:....-.::.......x:.:x:..::....:..::.x....:.....----------::...:.xx...x........:::........x..........:......-----......x..::..............x..x:.........:......:.....................:..x......................:::...x..:....x..x............:..........::...:.......:.:.....................:...::.......:.:xx....xx:..:.:....x.......-::....xx...........:x....:.x..::..x.:.:..... 17M1I41M10I50M5D214M1D44M 287/366 78.4% 377/94230402 0.0% 17/366 4.6% 88721628 NA +3033 chr4 + 190214555 159618841 159618840 159618885 45 TATATATATATATATATATATATATATACACACACAGTGATCGAA chr4 - 94230402 10898955 10898954 10898999 83331404 83331403 83331448 45 TATGTGTGTATATATATATACACATATACACACATAATGATTAAA ...:.:.:............:.:...........:.:....::.. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% 148719886 41494669 +3171 chr4 + 190214555 159728502 159728501 159728557 56 ATATATGTGTGTGTCTGTGTGTATTTGTGTATGTACACACAGACACACACAGACTT chr4 - 94230402 25393259 25393258 25393314 68837089 68837088 68837144 56 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTT ..:.:..::.....x...:...........:.::.......x..:.....:xx... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 134335243 55879312 +3182 chr4 + 190214555 159744435 159744434 159744507 73 AAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTATGTGTATATGTGTATATGTAAATGAAT chr4 - 94230402 39267133 39267132 39267205 54963198 54963197 54963270 73 AAGAATTCCGTATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAAT ...:.:..:..:.:x:.......:..x.:.:::...xxx......:...:....x....::..x.:x...... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 120477302 69737253 +3569 chr4 + 190214555 159746936 159746935 159747097 162 TGTATACATGTGTACACGTGTATACATACATGCATACACGCGTGTATACGTACATGCATACACGCATGTATATATGTATACACACATGTGTATATATGTATACGTATATACACATATATACATGTATACACATGTATATATACATATACATGTATTATATAT chr4 - 94230402 73121092 73121091 73121233 21109170 21109169 21109311 142 TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATAC------------------GTATAGGTACACGAGTATATGTGAGTAC--ATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAGAT ....xx.x:....:..:.::...x......:::......:x:x.:..:x......:.------------------.....x::...:.x......:..x:...--.....x.:.:::x:...x:x.:...........x::.x..x.x.x.:.x..x:.x.. 57M18D28M2D57M 91/142 64.1% 142/94230402 0.0% 20/142 14.1% 86625844 NA +3030 chr4 + 190214555 159746986 159746985 159747038 53 TACATGCATACACGCATGTATATATGTATACACACATGTGTATATATGTATAC chr4 - 94230402 38535896 38535895 38535948 55694455 55694454 55694507 53 TATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATAC ..:..:..:..:::....x:x...:::................:....:.... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 121211090 69003465 +3579 chr4 + 190214555 159746987 159746986 159747082 96 ACATGCATACACGCATGTATATATGTATACACACATGTGTATATATGTATACGTATATACACATATATACATGTATACACATGTATATATACATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATG----CACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .:.x........xx:....:.:...----....x:....:.x.....:.:.:....:.:.x.......x..x:.:.x.....::..x:.:..:.:. 25M4D67M 63/92 68.5% 92/94230402 0.0% 4/92 4.3% 131803450 58411105 +8016 chr4 + 190214555 159748822 159748821 159749092 271 AAGCTTTTTAGTTTGATGTAATACCTTGTGTATTTTTGTTTTCATTCCTTGTTCTTTTGGTGTCATGTCTAAGAAATCATTGCCAGG-GCCAATATCCAGAAGG-------TTTTTCTCTGTTTTCTGCCTCC--------CTCCCTCCCTGCCTCTT--TTCTCTTTTTTCTTTTCCCTTCCCTT--CCCTTCCCCTTTCCCTTTCCTTTTCCCTTTCCTTTTCCCTTTCCCTTCCCTTTGC-------------------CTTTCCCTTCCCTTTTCCCTTCCCTTTCTCCTTTCCTCTTCCCTTTTT chr4 - 94230402 20755145 20755144 20755453 73474950 73474949 73475258 309 AAAATTGTGAGTTCTGCATAATAATTTGTAGTTTTAGGATACTCGTCATCATTTCATTGGTTGTA-ATCTCAGAAGGTTTTGTTAGGAGTTGAAAGTCAGCAAAATGcttctccttccccctttttttccttctccttttactctttcatttcctcttatttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttccttttctcttttcttttcctGATTCCTTTCTCTTCCCTTTTCCAGATCCCTTTCTCTTTCCTTTTCCCTTTCT ..:x..x.x....:x:::.....x:....:xx...xx.x.x::xx..x.::..::x.....xx:.-:...x....:x:x...::...-.:::.x.x:...x.::-------.::...:.:x....:.x...:.--------...::..x:.x......--..:..:....:.......:..:....--..:..:..:.....:...........:...........:.....:..:.....x.-------------------.....:............xxx:..:..:::.......:........:. 65M1D21M1I16M7I22M8I17M2I26M2I55M19I48M 184/270 68.1% 309/94230402 0.0% 40/270 14.8% 138993677 51220878 +4833 chr4 + 190214555 159748926 159748925 159749040 115 TTTTCTCTGTTTTCTGCCTCCCTCCCTCCCTGCCTCTTTTCTCTTTTTTCTTTTCCCTTCCCTTCCCTTCCCCTTTCCCTTTCCTTTTCC------CTTTCCTTTTCCCTTTCCCTTCCCT chr4 - 94230402 20755334 20755333 20755454 73474949 73474948 73475069 121 ttttccttttccttttccttttccttttccttttccttttccttttccttttctcttttcttttcctGATTCCTTTCTCTTCCCTTTTCCAGATCCCTTTCTCTTTCCTTTTCCCTTTCTT .....::.x.::.:.x...::::.::.:...x:::......::...::.:..:..::...::....:xx::......:...:........------.....::.....:........:.:. 90M6I25M 75/115 65.2% 121/94230402 0.0% 6/115 5.2% 138993592 51220963 +5279 chr4 + 190214555 159748926 159748925 159749032 107 TTTTCTCTGTTTTCTGCCTCCCTCCCTCCCTGCCTCTTTTCTCTTTTTTCTTTTCCCTTCCCTTCCCTTCCCCTTTCCCTTTCCTTTTCCCTTTCCTTTTCCCTTTC chr4 - 94230402 20755346 20755345 20755452 73474951 73474950 73475057 107 ttttccttttccttttccttttccttttccttttccttttctcttttcttttcctGATTCCTTTCTCTTCCCTTTTCCAGATCCCTTTCTCTTTCCTTTTCCCTTTC .....::.x.::.:.x...::::.::.:...x:::............:.:..:::xx....:...:......:.....xxx...:....:................. 107M 74/107 69.2% 107/94230402 0.0% 0/107 0.0% 138993580 51220975 +3437 chr4 + 190214555 159748929 159748928 159749047 119 TCTCTGTTTTCTGCCTCCCTCCCTCCCTGCCTCTTTTCTCT-TTTTTCTTTT--------------------------------CCCTTCCCTTCCCTTCCCCTTTCCCTTTCCTTTTCCCTTTCCTTTTCCCTTTCCCTTCCCTTTGCCTT chr4 - 94230402 9693684 9693683 9693835 84536568 84536567 84536719 152 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .:.:..::....xxx..:..:......x.:.:...:.x.:.-.:.....:..--------------------------------::.....::......:......::::...x:..:.:x...::x..x:::...:.:........x.... 41M1I10M32I68M 78/119 65.5% 152/94230402 0.0% 33/119 27.7% 150055245 40159310 +3197 chr4 + 190214555 159748960 159748959 159749031 72 TCTTTTCTCTTTTTTCTTTTCCCTTCCCTTCCCTTCCCCTTTCCCTTTCCTTTTCCCTTTCCTTTTCCCTTT chr4 - 94230402 4728653 4728652 4728724 89501679 89501678 89501750 72 TTTTTTCACTTTATTCCAATCCCCTCCTGCCCTCTCTTGTTTCTCTTTCTCTTTCCCTTTTTGTTTTCATTT .:.....x....x...:xx....:...:x:..::..::x....:.....::.........::x...:.x... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 155020307 35194248 +3966 chr4 + 190214555 159749018 159749017 159749255 238 TTCCTTTTCCCTTTCCCTTCCCTTTGC-CTTTCCCTTCCCTTTTCCCTTCCCTTTCTCCTTTCCTCTTCCCTTTT-TCCTTTCTTCTTCCCTTTTTCC-----TTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTT-----TTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTT--CCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTT------CTCCTTTCCTCTTCCCTTTTTCTCT chr4 - 94230402 87463519 87463518 87463776 6766627 6766626 6766884 258 TCCCATTTTTCTTCCCCAGATTCTTACTCCTGCTGTTCCCTTTCCCCTTCCATTTCACATTGCCCCTTCCTTTTTCTCATTTCCTTTAATTTTTTTCCAGTAGCTTCCTGTAATTGCTTGCTCCACTTCTTGCCTATGGTAATATTTTCTTTGTTTTCTTTTTCAGGACCAGTTCTCTTCTTAGTCCTTCCCCTCTACTTTCTGGACTTGAATTTCATTTTTCATCCTCAAAACTTTATTGTTCTTGACATTTTCTTT .:..x...::...:...xxx:::..:.-.:.x.:x........:.......x....x.x..x..:.....:....-..x....:.:.xx::.......-----:.....x.xx::x:..x.:::x.:....x...x.-----.x::..:::.x..::.......xxxx.:xx...:...:..--:.:....:..::x....:.xxx:.:xxx..:.x......x.::------..::x..x:....xx.x......:. 27M1I47M1I22M5I34M5I40M2I43M6I25M 145/238 60.9% 258/94230402 0.0% 20/238 8.4% 72285499 NA +3346 chr4 + 190214555 159749022 159749021 159749107 86 TTTTCCCTTTCCCTTCCCTTTGCCTTTCCCTTCCCTTTTCCCTTCCCTTTCTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCT chr4 - 94230402 93244892 93244891 93244975 985428 985427 985511 84 TTTTCCCGTTC--TTCCCTTTGTCTCTTCCTTCCCCCATCCCCTGCTCTCCAGCCTTTCCCTTATCTGTTGTTCCACTTCCTCCCT .......x...--.........:..:.:.......::x....:.x.::.:.xx.:..:.:...x:..x..x::::x....:..... 11M2D73M 57/84 67.9% 84/94230402 0.0% 2/84 2.4% 66504130 NA +4107 chr4 + 190214555 159749107 159749106 159749248 142 TTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCT------CTTCCCTTTTTCCTTT--CTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCT--CTTCCCTTTTTCCTTTCTCCTTTCCTCTTCCCTT chr4 - 94230402 9693684 9693683 9693835 84536568 84536567 84536719 152 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .....x.:...:.xx..:...::...:xx:.:....:x...x..:..::..------....xx:.x:.xx...--..x.x.xx...:.....:...::..........:...:x..--..x:::..x..x:...:.:......::....... 51M6I16M2I41M2I34M 94/142 66.2% 152/94230402 0.0% 10/142 7.0% 150055423 40159132 +4513 chr4 + 190214555 159749114 159749113 159749296 183 TTTCCTCTTCCCTTTTTCCT---TTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTCCTTTCCTCTTCCCTTTTTCTCTTCCCTTCCTC--CCTTCCCTTCCCTTCCCTCCTTTCCTTTCTT chr4 - 94230402 59424945 59424944 59425124 34805279 34805278 34805458 180 TTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTT-TTACTTCCTCCTTTGTCCTGTCCCTGTGC---TTTTCTTTTCATGCTTTATCATTCGTGCCCCATTT----TTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTCATT ........x..:.:..:...---..:.....::....xx.x:...xx:.....:x.x.:-..x....:...:..x.:.:x.:...x.x.---.....:....x.x:.::x.:x...x.x:.:.x...----...x.x....:.:...........--.:.....:x.:.::xx.:.:.:.....:x.. 20M3I36M1D29M3D35M4D24M2I31M 116/175 66.3% 180/94230402 0.0% 13/175 7.4% 100324169 89890386 +3787 chr4 + 190214555 159749134 159749133 159749300 167 TTCCTCT-TCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTT--TCCTTTCCTCTTCCCTTTTTCC-TTTCCTCTTCCCT-TTTTCCTTTCTCCTTTCCTCTTCCCTTTTTCTCTTCCCTTCCTCCCTTCCCTTCCCTTCCCTCCTTTCCTTTCTTCCTT chr4 - 94230402 38122945 38122944 38123112 56107291 56107290 56107458 168 TTCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGC----TCCTTTTTTCCGCTACATTCTTCCCT ......x-..x....:.........x..:.:.....:::.x.....x.x..:x.--.:.x.:xx:..x.:..x..:..-...:...:..x..-..:....::x.x..:.:..x:.x:x....:.x:x.x.:...:.:...x.----:....:::...x:.x.x.......:. 7M1I46M2I22M1I13M1I49M4D26M 106/163 65.0% 168/94230402 0.0% 9/163 5.5% 121626189 68588366 +3074 chr4 + 190214555 159749187 159749186 159749239 53 TCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTCCTTTCC chr4 - 94230402 92631100 92631099 92631152 1599251 1599250 1599303 53 TCCTTCCCTTTTCCCTTTTCCCTCTTCCCTTCCCTCCCTCCGTGCTGCTGTCC .....:...:.........:...:.:.:.......:::...x.x..x..x... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 67118087 NA +3595 chr4 + 190214555 159749191 159749190 159749351 161 TTCCTCT-TCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTCCTTTCCTC--------TTCCCTTTTTCTCTTCCCTTCCTCCCTTCCCTTCCCTTCCCTCCTTTCCTTTCTTCCTTTCCTTTCCTTCCCTTCCCTTCCCTTTCCCTTTCCCTTCCCTTCCCTTTCCT chr4 - 94230402 38122945 38122944 38123112 56107291 56107290 56107458 168 TTCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCT--CCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCT ......x-..x....:.........x..:.:.....:::.x..:..x:x...--------.:xx.:.x:...x.....x.::..:.:..x..x::..--.....x.x.::....x.:x.x::..:.x.x:x...:.:....:x:...:...::.:x.:x:x::...:... 7M1I44M8I37M2D71M 97/159 61.0% 168/94230402 0.0% 11/159 6.9% 121626246 68588309 +3915 chr4 + 190214555 159749212 159749211 159749378 167 CCTCTTCCCTTTTTCCTTTCTCCTTTCCTCTTCCCTTTTTCTCTTCCCTTCCTCCC----TTCCCTTCCCTTCCCTCCTTTCCTTTCTTCCTTTCCTTTCCTTCCCTTCCCTTCCCTTTCCCTTTCCCTTCCCTTCCCTTTCCTACTTTTTCTTTC--CTTCCTTATTCCTTC chr4 - 94230402 38122941 38122940 38123113 56107290 56107289 56107462 173 CTTGTTCCTCAATCACTTTCTCCTTTCCTATTTCTTTTTTTTCTACTTCTACACTCGTAATTCATCAACCTACTCTATTCCCATTTTCTCCTCACTGTTCTCCTCCATACTCTTCTGCTGTGTTTTCCATATGCTTTCTTTCCTGCTCCTTTTTTCCGCTACATTCTTCCCTC .:.x....::xx.:x..............x..:.:.....:...x.:::.x.x.:.----...x::xx...x.:..x:.::.x...::....:x.:x...::::..x.x.::.:.:x:.x:x...:..x.x:x:.::.......:..::..:....--..x.x..x....:.. 56M4I96M2I15M 99/167 59.3% 173/94230402 0.0% 6/167 3.6% 121626271 68588284 +3084 chr4 + 190214555 159759073 159759072 159759131 59 AAAAAAAAACAACAAAAAAACAAAAAACAAAAACAAAACAAAATATACAATGCCTATGA chr4 - 94230402 52983420 52983419 52983478 41246925 41246924 41246983 59 AAAAAAAAAGAAAGAAAAAACAAAAAACCCAACAGAAATGAAACACACGGTGCCTATAA .........x..x:..............xx..xx:...::...:.:..::.......:. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 106775653 83438902 +3319 chr4 + 190214555 159840802 159840801 159840859 58 AAATACTTCAAACTCATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704269 19704268 19704326 74526077 74526076 74526134 58 AAGCAATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..::.x.::...:x........::.......x.....:...x::.............. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 140136533 50078022 +3148 chr4 + 190214555 159840810 159840809 159840917 108 CAAACTCATATATATATATAT---ATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATATTCAAT chr4 - 94230402 40224612 40224611 40224720 54005683 54005682 54005791 109 CAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATG--TATATATAAATACATATGTGTTCAAT ......x::.:..:....x.x---...:x.:.:::.:...:xx.x.x....::xxx.x.::x..x.x...............:--........x...:....:.:...... 21M3I59M2D26M 71/106 67.0% 109/94230402 0.0% 5/106 4.7% 119616198 70598357 +3043 chr4 + 190214555 159840817 159840816 159840861 45 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704282 19704281 19704326 74526077 74526076 74526121 45 ACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG .:.......::.......x.....:...x::.............. 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 140136535 50078020 +3171 chr4 + 190214555 159840817 159840816 159840866 50 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ...:.......::.....:.x.....:...x::..............x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 140136537 50078018 +3105 chr4 + 190214555 159840852 159840851 159840912 61 TGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATATATATATATATATATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .....::x.:.::...x:...x.....::...:.......:.......:.x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 126881284 63333271 +3172 chr4 + 190214555 159894652 159894651 159894709 58 CCGGGTTCAAATGATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGACTAGAGGTGCAC chr4 - 94230402 18197142 18197141 18197199 76033204 76033203 76033261 58 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:........:..x...x.xx.x........::::.........:....x.x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 141697510 48517045 +3034 chr4 + 190214555 159929031 159929030 159929065 35 TGGTGTTTTTTGTTTGTTTGTTTTTTGTTTTTTTA chr4 - 94230402 61182420 61182419 61182454 33047949 33047948 33047983 35 TGGTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTTA ....x.............................. 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 98746611 91467944 +3526 chr4 + 190214555 159944380 159944379 159944517 138 GATTTTTCTTTTCTTTTT-CTTTCCTCTTCTCCTCATCTTTTTTCTTTCCCTTCCCCTCCCTTCTGCCTCCTCTCCCTTCTCTC-------------TTCCATCTCCTCCTCCTCTTCCTCCTACTTCTCCTCACT---TCCCTCTTCATCTCCT chr4 - 94230402 91731744 91731743 91731898 2498505 2498504 2498659 155 GGTTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTT .:...:..x.......:.-....x..:.:..:.:.x::.::.....::.::.xxxxx..:....::::..::.......x....-------------::..:......x.x.:.x:.x.:x::..:x....:..:.---:..:...:......:. 18M1I65M13I39M3I16M 86/138 62.3% 155/94230402 0.0% 17/138 12.3% 68212636 NA +3559 chr4 + 190214555 160025899 160025898 160025990 92 GTGTATATATATATATACACACATACACACAAATTTATATTTATATATATATGTGTGTGTATATATATACATACACACACACACACACACAC chr4 - 94230402 14964794 14964793 14964884 79265519 79265518 79265609 91 GTGCATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:..x......x.x::::-::.:x........x.:.x.x::.:.::.:.:....:........:.xx..:.....::............. 20M1D71M 61/91 67.0% 91/94230402 0.0% 1/91 1.1% 145061105 45153450 +3264 chr4 + 190214555 160025911 160025910 160026006 96 ATATACACACATACACACAAATTTATATTTATATATATATGTGTGTGTATATATATACATACACACACACACACACACACAGACACACATACAAAA chr4 - 94230402 8395788 8395787 8395875 85834528 85834527 85834615 88 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATG--------CCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:.::::.::.:::..:...:x.:......:....:....--------:x..:..xx...................x...x.x.::x...x.... 41M8D47M 60/88 68.2% 88/94230402 0.0% 8/88 9.1% 151630123 38584432 +3296 chr4 + 190214555 160025913 160025912 160026006 94 ATACACACATACACACAAATTTATATTTATATATATATGTGTGTGTATATATATACATACACACACACACACACACACAGACACA-CATACAAAA chr4 - 94230402 55543406 55543405 55543500 38686903 38686902 38686997 95 ATGTATGTATACATACAGATCTTTATTCATATACACATGGGTGTACATTTGTATGCTCACACTCTAACATAAATATAACAAAACAGCATACACAA ..::.:::.....:...:..:.x....:.....:.:...x....::..x.:...:.x:....x.xx...:.x.:.:.xx:.x...-......x.. 85M1I9M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% 104482507 85732048 +3024 chr4 + 190214555 160025928 160025927 160026005 78 CAAATTTATATTTATATATATATGTGTGTGTATATATATACATACACACACACACACACACACAGACACACATACAAA chr4 - 94230402 8395787 8395786 8395864 85834539 85834538 85834616 78 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ..x:.x.:...x.:.::...x.::...:.x..:....:..:::x:...:xx.:...........x.....x.:..... 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 151630141 38584414 +3556 chr4 + 190214555 160025934 160025933 160026014 81 TATATTTATATATATATGTGTGTGTATATATATACATACAC----ACACACACACACACACAGACACACATACAAAAATTAGCCA chr4 - 94230402 8395795 8395794 8395879 85834524 85834523 85834608 85 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA ...:.x.::...x.:....:.x.::....:...:.x....:----.......................x..:x.x...xx.x... 41M4I40M 60/81 74.1% 85/94230402 0.0% 4/81 4.9% 151630139 38584416 +3465 chr4 + 190214555 160025934 160025933 160026019 86 TATATTTATATATATATGTGTGTGTATATATATACATACACACACACACACACACACAGACACACATACAAAAATTAGCCAGGTGT chr4 - 94230402 4481679 4481678 4481764 89748639 89748638 89748724 86 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTAT .:...x.:.x.x:....:x......:...:.::...x...:.....:x....:..x.x:...:.:..::.x.x....x.:....:. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 155544255 34670300 +3007 chr4 + 190214555 160025940 160025939 160025998 59 TATATATATATG----TGTGTGTATATATATACATACACACACACACACACACACAGACACAC chr4 - 94230402 24136200 24136199 24136262 70094141 70094140 70094203 63 TATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .......x....----...x.:....:...........x...x...x.......:.xx:.... 12M4I47M 48/59 81.4% 63/94230402 0.0% 4/59 6.8% 135889740 54324815 +3196 chr4 + 190214555 160050354 160050353 160050412 59 TATATATATAACGGATATATATAATGGATATATATATATATATACACACACACACACAC chr4 - 94230402 52384117 52384116 52384175 41846228 41846227 41846286 59 TGTATGTATAACAGATGTCTGTGGTTTTTTTATATATATATATACACACACGCGCGCAC .:...:......:...:.x.:.::.xxx.x.....................:.:.:... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 107666237 82548318 +3194 chr4 + 190214555 160081641 160081640 160081718 78 TGGCTACACACACATACACACACACACACACACACACACACACACACACACACACACACACAGAAAGAAAGAGAGAGA chr4 - 94230402 53842125 53842124 53842202 40388201 40388200 40388278 78 TAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACAAAACTAAAGAGAGAAA .:.:......xx:.:...:x:::.::....:.::..:...:::.x.:.x.....:.......:..xx.........:. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 106239516 83975039 +3297 chr4 + 190214555 160096473 160096472 160096547 75 TTTATTTAATTCTTTAACTTTGTTTTTTGGTTACCTTCTTTAAAGAATTATAAAAACAACTTAAGAATGGTATGC chr4 - 94230402 81786614 81786613 81786688 12443715 12443714 12443789 75 TTTATCTGTTTTGTTGACTTTGTTTTGTGGTTACCTCCATTAACAAATTAAAAAAAGGGGGGGAGAATGCAATGC .....:.:x..:x..:..........x.........:.x....x:.....x.....x::xxx:......xx.... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 78309859 NA +3018 chr4 + 190214555 160101325 160101324 160101365 41 ATATCTATATACACACACACATATAAATATACACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ...........:.......:.....x:......x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 114829637 75384918 +3150 chr4 + 190214555 160105443 160105442 160105505 63 TTCCTTCCTATTTATTATTCTTCCTTCCTCCCTTTCTTCTCTTTCTTTCTCTCTTTTTCTTCT chr4 - 94230402 8439379 8439378 8439441 85790962 85790961 85791024 63 TTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCT ..:..:..:..x.x:.:....:....:x:...::..::......:..::.:.:.......... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 151666064 38548491 +3016 chr4 + 190214555 160112996 160112995 160113036 41 ATGTGTGTGTGTATGTGTGTGTGTATATATATATATATATA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 70291715 NA +3299 chr4 + 190214555 160185283 160185282 160185356 74 CTGCAACCTCTGCCTCCTGGATTCAAGCAATTCTCCTGTGTCAGCCTCCCGAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:....:......::x...x.xx.xx.......::.:.......:.:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 141988157 48226398 +3136 chr4 + 190214555 160186213 160186212 160186271 59 ATATATATAGAATATATATATATAGAATATATATATAGAATATATATATATAGAATATA chr4 - 94230402 69861011 69861010 69861069 24369334 24369333 24369392 59 ATATATATAGTACATATATATTCAGAATATATATTTAGTACATATTTAAACAAGACACA ..........x.:........x:...........x...x.:....x..x.:.::.:.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 90325202 NA +3136 chr4 + 190214555 160186241 160186240 160186299 59 ATATATATAGAATATATATATATAGAATATATATATAGAATATATATATATAGAATATA chr4 - 94230402 69861011 69861010 69861069 24369334 24369333 24369392 59 ATATATATAGTACATATATATTCAGAATATATATTTAGTACATATTTAAACAAGACACA ..........x.:........x:...........x...x.:....x..x.:.::.:.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 90325230 NA +3136 chr4 + 190214555 160186269 160186268 160186327 59 ATATATATAGAATATATATATATAGAATATATATATAGAATATATATATATAGAATATA chr4 - 94230402 69861011 69861010 69861069 24369334 24369333 24369392 59 ATATATATAGTACATATATATTCAGAATATATATTTAGTACATATTTAAACAAGACACA ..........x.:........x:...........x...x.:....x..x.:.::.:.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 90325258 NA +3019 chr4 + 190214555 160186297 160186296 160186346 50 ATATATATAGAATATATATATATAGAATATATATATAGAATATATATAGA chr4 - 94230402 69861011 69861010 69861060 24369343 24369342 24369392 50 ATATATATAGTACATATATATTCAGAATATATATTTAGTACATATTTAAA ..........x.:........x:...........x...x.:....x..:. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 90325286 NA +3038 chr4 + 190214555 160186415 160186414 160186463 49 TATATAGAATATATATATATAGAATATATATATATAGAATATATATACA chr4 - 94230402 15418490 15418489 15418538 78811865 78811864 78811913 49 TATATAAGATATATATATCTATCATATATATACATAAGAGATATATACA ......::..........x..xx.........:...::.x......... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 144767925 45446630 +3136 chr4 + 190214555 160187727 160187726 160187804 78 TGCTTCTTTTTTGTTTGTTTGTTTGTTTTTTCTTTTTTTGAGACGGAGTGTCACTGTGTCACCCAGGCTGGAGTGCAG chr4 - 94230402 12643011 12643010 12643088 81587315 81587314 81587392 78 TGGCTCCTTTTTGTTTGGTTGGTTGTCTTTTTTTTTTTTTTAAGGGAATGTTAGAATTTTATTCCTGCTAAATTGCAG ..x:..:..........x...x....:....:.......xx:.x...:...:.xx:.x.:.::.xx...::.x..... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 147544716 42669839 +3076 chr4 + 190214555 160222329 160222328 160222388 60 CCTTTAAGATATTTTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTT chr4 - 94230402 56232443 56232442 56232502 37997901 37997900 37997960 60 CTCTTAAAAGATTATTTCTCTCTCTCTCTTTTTTTTTTTTTTTAATGTAATCAAAATTTT .::....:.x...x.:.:.........................xx.xx.:x..:.:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 103989886 86224669 +3962 chr4 + 190214555 160229941 160229940 160230023 83 CTGCAACCTCCATCTCCTGGATTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACACGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:..:..:xx.x..:....:........x...x.xx.x........::...........:.:......--..::....::.. 69M2D12M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 142032815 48181740 +3036 chr4 + 190214555 160237082 160237081 160237143 62 GTATGTGTGTATACATGTTTATATGTATGCATAAATCTATCTTTATATGTATACACACAGAA chr4 - 94230402 61244979 61244978 61245040 32985363 32985362 32985424 62 GCATGTGTGTGTAAATGCTGATATGTTTGCACAAGTCTGTGTGCGCACATACACAAACAGAA .:........:..x...:.x......x....:..:...:.x.x:::.::..:...x...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 98992103 91222452 +3120 chr4 + 190214555 160245029 160245028 160245090 62 TAATTGTTACCTAGTGTTACCTGTTTTTTTTTTGTTGTTGTTGTTGTTGTTAATTGTTACCT chr4 - 94230402 41112009 41112008 41112067 53118336 53118335 53118394 59 TGATGGTTATCTTGTGTAACTTATTTTACTTTTTTTGTTGTTGTTGTTGT---TTGTTTCCT .:..x....:..x....x..:.:....x:....x................---.....x... 50M3D9M 48/59 81.4% 59/94230402 0.0% 3/59 5.1% 119133020 71081535 +3172 chr4 + 190214555 160259480 160259479 160259535 56 AAACAATTTTTTCTTTTTTCCTTTTTTCTTTCTTTCTTTTTTTTTTTGAGATGGAA chr4 - 94230402 72884648 72884647 72884703 21345700 21345699 21345755 56 AGACAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGGGA .:...:.:..x..::.:.......:..:...:.............:..:x:...:. 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 87374832 NA +3372 chr4 + 190214555 160331653 160331652 160331735 83 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCAATCTGAAAATGTTATGTACTCT chr4 - 94230402 60043075 60043074 60043157 34187246 34187245 34187328 83 GCTTCTAACAAAAGTAAAAGAAAAAAATAAAAAAAACCTAAAGTATTAAAAAAAAAATGTTCTCTGATTATTTTATGTACTTT .::..x..x....:x....:.......x........xxx...:x.xx...........x:xx.....xx..x.........:. 83M 60/83 72.3% 83/94230402 0.0% 0/83 0.0% 100288578 89925977 +3069 chr4 + 190214555 160331654 160331653 160331714 61 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCAA chr4 - 94230402 2012072 2012071 2012132 92218271 92218270 92218331 61 TCTCAAAACCAATGAAAATTAAAATAAAAAGTGAAAAAAAAAAAAAAGAAAATGAATCAAA ........xx..x:....xx....x.....:x:..............:....x:....x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 158319582 31894973 +3355 chr4 + 190214555 160349851 160349850 160349910 60 TATATATATACACACACATATATACATATATACACATATATAGTATATATATATATATAT chr4 - 94230402 50941876 50941875 50941935 43288468 43288467 43288527 60 TATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTAT .......::...x..........:...x......::......x.x.:x...:...::... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 109407975 80806580 +3169 chr4 + 190214555 160350534 160350533 160350719 186 CATATACATGTATATATGTATA-TATATATACATGTATACACATGTATACATATACATACACTATATGTATATATATGTATATATACATATACATATAGTGTATGTATACATACATACACTATATGTATATATATGTATATATACATATACATATAGTGTATGTATACATACATACACATATATACA chr4 - 94230402 67999851 67999850 68000035 26230368 26230367 26230552 185 CAGATACAGATTTTTACTCATGCTCTGTATGTGGACACACACATGCATATATATTCATGCACTATA--TATATATATGCACACAGAAACAGACTTGCACCATCTTCTCTCATAAAAAAGTTCTGTGTTAACTGTTCTTTGAAGCCAGAAACATGCATTTTGCATACATCTAGATGTACAGATGCACA ..x.....x:.x.x..:x:..:-.x.:...:::x::.:.......:...:....x...:.......--..........:.:.:.x.x.:.x..x.::.x::.x.x:x:x....x.x.x::.x.:...xx.:xxx.x.x.:x.xx..x.x....::.x.x.:::..:.:x..x..::...x..::... 22M1I43M2D119M 106/184 57.6% 185/94230402 0.0% 3/184 1.6% 92350683 NA +3695 chr4 + 190214555 160354971 160354970 160355130 160 AACTGCCATATGCAACAGCAAAAGTAAATATATATATATATATATATATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATAT---ATATA----------TATATATATATATACACATATA----------------TATATATATACATACACACATACTTT chr4 - 94230402 40224614 40224613 40224796 54005607 54005606 54005789 183 AACTAGCACATGTAT-----AAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCAT-TACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGTTTT ....:x..:...:.x-----....:x....:x....:....:..xx.x.x.:.::.xxx:x...x..x.x.:.........:...:........x.....:..:.:.---.....----------.x.::..x:..-......:...----------------.:.x.....::x.........::... 15M5D87M3I5M10I11M1D10M16I26M 108/154 70.1% 183/94230402 0.0% 35/154 22.7% 120130357 70084198 +3018 chr4 + 190214555 160355000 160354999 160355079 80 ATATATATATATATATATATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATATAT chr4 - 94230402 40224636 40224635 40224715 54005688 54005687 54005767 80 ATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ...:x....:....:..xx.x.x.:.::.xxx:x...x..x.x.........:.:...:........x.:......:.:. 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 120130364 70084191 +3188 chr4 + 190214555 160355004 160355003 160355115 112 ATATATATATATATATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATATATATATATATATATATAT---ACACATATATATATATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x..x.:.......:.:.:.:.:...x:x.....:::...x.x..x.::.:..:...xx.x::.:x:.x.....:.:....x...x.....---...x.:.:xx.:.....x.. 92M3I20M 71/112 63.4% 115/94230402 0.0% 3/112 2.7% 155937661 34276894 +3084 chr4 + 190214555 160355006 160355005 160355096 91 ATATATATATATATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATATATATATATATATATATATA chr4 - 94230402 4417343 4417342 4417433 89812970 89812969 89813060 91 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATA ..x..x.:.......:.:.:.:.....x:x.:...::::..x.x..x.::.:..:...xx.x:..:x..x.....:.:....x...x.... 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 155937663 34276892 +3233 chr4 + 190214555 160355008 160355007 160355114 107 ATATATATATATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATATATATATATATATATATATA-----CACATATATATATATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:.......:.:.:.......x:x.:...:.::..x.x:.x.::.:..:...xx.x:...x..x.....:.:....x...x..-----....x.:.:xx.:..... 89M5I18M 70/107 65.4% 112/94230402 0.0% 5/107 4.7% 155937665 34276890 +3781 chr4 + 190214555 160355018 160355017 160355101 84 ATATATATATACACACACATATATATGTGTGTGTATATATATATATATATACACATATATATATATATATATATATATACACAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTC---TGTAGATGTATAGATAGATAGGTGTACAT .....:...:.:........::.:.:x.........:...:...x.....x.---.:..x..:....x...x...x:.::.... 52M3D29M 60/81 74.1% 81/94230402 0.0% 3/81 3.7% 98869645 91344910 +3115 chr4 + 190214555 160355033 160355032 160355079 47 CACATATATATGTGTGTGTATATATATATATATATACACATATATAT chr4 - 94230402 56650837 56650836 56650883 37579520 37579519 37579566 47 CACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT ....xx......:.....:..x......:...:.:............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 103704196 86510359 +3122 chr4 + 190214555 160355084 160355083 160355124 41 ATATATATATATACACATATATATATATATACATACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x............:........:......x....... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 115083396 75131159 +4496 chr4 + 190214555 160356161 160356160 160356376 216 GTGGGGGGAAACATATATATATTTTACATATATATAATATATTATATATAATATATATTATATAATATATA---TAATATATTATATATATTATATATATTATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATATATATAATATATTATATATATTATATATAATATATATTATATAATA-TATTTAATATATTTATAGTAT chr4 - 94230402 20596422 20596421 20596634 73633769 73633768 73633981 213 GTTGGAGGAAAAATAGAGAAAAAATATTTCTAAGTCAAATGTTAATTACCATGTATATCATAACAT-TATAACGTGaaataatattta-ataatttgtattataaaaC--AGATACTTTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTA---AAAGTTTAATATTTGATGTTGTCTTATATCTCTACAATGT ..x..:.....x...x.x.x.xxx..:x.x..x:.x.x..:...xx..:x..:.....:...xx..-....---.:.x...x...x..-..x..x.:.......x.x:--.x...:......x..:................:....xx..:..x..:x.....x.x:..:.x.x..---..x:.x..x...x.:..:-.:.:.x....x.:..:.:.:. 66M1D4M3I14M1D19M2D67M3D18M1I21M 142/209 67.9% 213/94230402 0.0% 11/209 5.3% 139759739 50454816 +4151 chr4 + 190214555 160356185 160356184 160356325 141 TACATATATATAATATATTATATATAATATATATTATATAATATATATAATATATTATATATATTATATAT---ATTATATATTTTATATATTTTATATAATA-TATATAATATATATTATATATAATATATATAATATATTATA chr4 - 94230402 48211476 48211475 48211620 46018783 46018782 46018927 145 TACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTA ......::xx.........x...:..x.:........x.xx.......x....:::....x...:......---.x:.....::x....::x.:...:x.x:.-.:x..:....::.x...xx.x:..xx.:....x..:.:x.. 71M3I29M1I41M 94/141 66.7% 145/94230402 0.0% 4/141 2.8% 112144709 78069846 +3710 chr4 + 190214555 160356207 160356206 160356355 149 TATAATATATATTATATAATATATATAATATATTATATATATTATATATATTATATATTTTATATATTTTATATAATATATATA------ATATAT--------ATTATATAT---------AATATATATAATATATTATATATATTATATATAATA---TATATTATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGA----AAATATTTTATTAATGACACACTACATTACAGAACA ...x.:.....:x...:x.x.x.....x...xxx...:...x..x.......:.....xx.......xx...:..:......:.------...x..--------....x....---------....:......x.----.x....x....xx..:.:.---..:....:.x..:. 84M6I6M8I9M9I13M4D19M3I14M 108/145 74.5% 171/94230402 0.0% 30/145 20.7% 92446148 NA +3786 chr4 + 190214555 160356223 160356222 160356396 174 TAATATATATAATATATTATATATATTATATATATTATATATTTTATATATTTTATATAATATATATAATATATATTATATATA------ATATATATAATAT-ATTATATAT-ATTATATATAATATATATTATATAATATATTTAATATATTTATAGTATATATAATATATTATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTG-AATACATATAAGAAAATAT------TTTATTAATG----ACACACTACATTACAGAACA ..x..:.....xx...:..x.x....xx...xx:x..:...x.xx.......x......:............:..x......:.------...x..x...xx.-....x....-.x:..x.:-....:....x.x.x.....------.x....x..:----.:.:.x..:....:.x..:. 84M6I13M1I9M1I8M1D19M6D10M4D20M 118/163 72.4% 171/94230402 0.0% 19/163 11.7% 92446164 NA +3787 chr4 + 190214555 160356246 160356245 160356417 172 TATTATATATATTATATATTTTATATATTTTATATAATATATATAATATATATTATATATAATATATATAATATATTATATATATTATATATAATATATATTATATAATAT-ATTTAATAT----ATTTATAGTATATATAATATATTATATAATATATTATA---TATATTATATAATA chr4 - 94230402 67910059 67910058 67910229 26320174 26320173 26320344 171 TATTACATATACAATAC--TAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATA---TACATGTGAGATAAATT---TAAGCTGATTAAATATCAACATTTG-AATACATATAAGAAAATATTTTATTAATGACACACTACATTACAGAACA .....:.....:x...:--.xx.x....x:...xx:...:...xx.x.......:......:............:.x:....---..:..:.:.x...x...---...xx.-...x.....----....:-.:..:......x.x.x...x.x..xx..x.:.---..:....:.x..:. 17M2D63M3D17M3D6M1I9M4I5M1D32M3I14M 118/163 72.4% 171/94230402 0.0% 17/163 10.4% 92446187 NA +3791 chr4 + 190214555 160356276 160356275 160356420 145 TATATAATATATATAATATA-TATTATATATAATATATATAATATATTATATATATTATATATAATATATATTATATA--------ATATATTTAATATATTTATAGTAT--ATAT---AATATATTATATAATATATTATATATATTATATAATATAT chr4 - 94230402 67910066 67910065 67910220 26320183 26320182 26320337 155 TATACAATACTAAAAATATACTATTAGATACATAATA---AATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTA-AATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACAT ....:....:xx.x......-.....x...:.xx...---........:......x............:..x......--------...x......xx.:x...-.:...--.:..---....:..xxx.x..x.....x...xx..x.:.:.x..:.. 20M1I16M3D38M8I18M1D5M2I4M3I40M 107/141 75.9% 155/94230402 0.0% 18/141 12.8% 92446210 NA +3155 chr4 + 190214555 160356827 160356826 160356875 49 ACACACACACACACACATATATATATACACACACACACACATATGCATC chr4 - 94230402 1470663 1470662 1470711 92759692 92759691 92759740 49 ACACACACACACACATATATATATCTCAACACATGCACAAATGTGCACC ...............:........x.xx.....::....x..:....:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 158886164 31328391 +3365 chr4 + 190214555 160390605 160390604 160390711 107 AGTATATATAGTAAAGTATACATATATAACATAATATATATAATATTTTGTGTATATATACA---CACACATATGTGTGTGTGTGTATATAGATATACATACATATGTGT chr4 - 94230402 40224618 40224617 40224715 54005688 54005687 54005785 98 AGCACATGTA-TAAAGCTAATACTTATA------CATATGTAACTTTTTGTGCA-----ACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ..:.:..:..-.....:xx.:.:x....------:....:...:x.......:.-----...---..x.:x.x...............:..x.....x............ 10M1D17M6D20M5D3M3I45M 74/95 77.9% 98/94230402 0.0% 15/95 15.8% 120165987 70048568 +3256 chr4 + 190214555 160405565 160405564 160405608 44 TGGTTTTTTGTTTGTTGGTTGGTTGGTTTTTTTTTTTTTTTTTT chr4 - 94230402 87951247 87951246 87951290 6279113 6279112 6279156 44 TGGTTTTTGGTTGGTTGGTTGGTTGTTTTTTTTTATTTTTTTTT ........x...x............x........x......... 44M 40/44 90.9% 44/94230402 0.0% 0/44 0.0% 72454318 NA +3412 chr4 + 190214555 160423786 160423785 160423860 75 TGTGTATGTATGTATG--CATGTGTTTGGATATGTATATGTATAAAAATAAATATGTACACACACACACACACACAA chr4 - 94230402 8395791 8395790 8395863 85834540 85834539 85834612 73 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTAC----ATTAATACACACACACACACACAGACACAA .........:..:..:--.....:...:x........::x..:----..x....:::.............x...... 16M2I25M4D30M 56/71 78.9% 73/94230402 0.0% 6/71 8.5% 152027995 38186560 +3118 chr4 + 190214555 160484600 160484599 160484690 91 TGTATCTTATGTATATT-----ATATGAGTTCTTATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAT chr4 - 94230402 70982591 70982590 70982681 23247722 23247721 23247812 91 TATTTCATATATATATTTATTCATGTAACTTTTT-----TCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .:.x..x...:......-----..:.:.x..:..-----.x:x...........:........:....:.x:...x..:.:.:.::...:.:.:.. 17M5I12M5D57M 61/86 70.9% 91/94230402 0.0% 10/86 11.6% 89502009 NA +3036 chr4 + 190214555 160484636 160484635 160484675 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 70663354 NA +3118 chr4 + 190214555 160497701 160497700 160497762 62 TATTTAAATGTCTATTTTAGAAAAGACTAAAAGCAATAAGCATATTATAAATTTAAAATTTT chr4 - 94230402 70156662 70156661 70156723 24073680 24073679 24073741 62 TATGTAGATGTTTATTTTTGAAAAGACCAAAAACAGTAGAAAAACAATAAATCTACATTTTT ...x..:....:......x........:....:..:..::x.x.:x......:..x.x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 90341039 NA +3034 chr4 + 190214555 160510919 160510918 160510960 42 ATATATATATATATATATATATGCATATATATACACATTTTA chr4 - 94230402 12217120 12217119 12217161 82013242 82013241 82013283 42 ATATATGTATACATGCATATATGCATACATATACAAATTTTA ......:....:..::...........:.......x...... 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 148293799 41920756 +3226 chr4 + 190214555 160530233 160530232 160530287 55 TTGCGGATTTTTTTCTTGTTTTGCTTGTGTGTTTTTTTTCATATTTTCTGTATAA chr4 - 94230402 7804475 7804474 7804529 86425874 86425873 86425928 55 TTGTCAAGTTTTTTTTTGTTTTGTTTGTTTGGTTTTTTTCCCATTTGCTGTATAA ...:x:.x......:........:....x..x........x:....x........ 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 152725758 37488797 +3037 chr4 + 190214555 160580024 160580023 160580084 61 CATGTACCCTAAAACTTAAAGTATAATTAAAAAAAAATAAATAAAATAAAATAAAATAAAA chr4 - 94230402 55845322 55845321 55845382 38385021 38385020 38385081 61 CAAGTACTTTAAAAGTAGAAGTAAGATTTAAAACAAACAAACAAACTAAAAAAAGATAAAA ..x....::.....x.x:.....x:...x....x...:...:...x.....x..:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 104734702 85479853 +3310 chr4 + 190214555 160587150 160587149 160587223 74 CCACAACCTCCACATCCTGGGTTCAAGTGATTCTTGTGCCTCAGCCTACCGAAAGGCTGGGACTACATGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:...:..:xx.xx.:.............x...x::x.x........x:.:.:x:.....:......:.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 142390024 47824531 +3027 chr4 + 190214555 160628456 160628455 160628496 41 ACATATATATACACACACATATATATGTACACACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA .:..x......:.................:...x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 115356768 74857787 +3226 chr4 + 190214555 160687213 160687212 160687269 57 AAAATAAAGAAAAAAAAATAAAGAAGGAAAAACAAAACCTCCAAGAAATATGGAATT chr4 - 94230402 56486671 56486670 56486727 37743676 37743675 37743732 57 AAAATAAAGAAAAAAAAAAAAAGAGTGAAAAATATCCACTACAAAAAAGATGGAATT ..................x.....:x......:.xxxx..x...:...x........ 57M 46/57 80.7% 57/94230402 0.0% 0/57 0.0% 104200542 86014013 +3082 chr4 + 190214555 160719884 160719883 160719943 60 CTTCCCCCCTCCCCTCCCCTCCCTCCCCTTTCCTTTCCTTTCCTTTTTTAGATGGAGTCT chr4 - 94230402 36509255 36509254 36509314 57721089 57721088 57721148 60 CCTTACTCCTCCCCTTCCTCCCCCCCCCCCCCCTTTTTATTTTTTTTTTGGAAGAAGTCT .:.:x.:........:..::...:....:::.....::x..::......:..x.:..... 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 124210629 66003926 +3247 chr4 + 190214555 160723911 160723910 160723979 69 ATTTCTTTCTTTTTCTTTTTTTTTTTTTTCTTTTCTTTGGAGATAGGGTCTTGCTCTGTTTTCCAGGCT chr4 - 94230402 35978796 35978795 35978864 58251539 58251538 58251607 69 ATCTCTCTATTGTACTTTTTTTTTTTTTTTTTTTCAGTTAAAAGAGGTTTCTACTCTGTTTTCTGGATT ..:...:.x..x.x...............:.....xx.x:.:.x...x.::.:..........::.::. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 124745115 65469440 +3580 chr4 + 190214555 160726474 160726473 160726604 131 AACTCCAGATTC----CAGGTATTACAGCTAGA--TAGATAAATAGATATGAGGGGAATATATA------------------TATATATATATATATATATATATATATATATATATACACACACACACACACACATATAT--------GTATATATATACAC chr4 - 94230402 88147098 88147097 88147259 6083144 6083143 6083305 162 AAATCCATATTCATGGCAGGGGGTAGAATTAAAACCAGCCAAATAGATGTAAAAGGACACTAAACCTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATAGGGAGAAGCATATATCAACAC ..x....x....----....x:x..x.::..:.--:..x:........:.:.::...xxx..x.------------------..:..:..x:x..............:.x.:.:...:.:.............-.......--------.:......xx.... 12M4I17M2I29M18I51M1D7M8I14M 96/130 73.8% 162/94230402 0.0% 33/130 25.4% 72579376 NA +3071 chr4 + 190214555 160726510 160726509 160726608 99 ATAGATATGAGGGGAATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATGTATATATATACACACAT chr4 - 94230402 4481662 4481661 4481753 89748650 89748649 89748741 92 ATAAAAATGACAGGGAC-------TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...:.x....x:..:.:-------.:...:.:.x.x:.....x:.:.:.:...:.::...x...:.....:x......:x:xx.:......::...... 17M7D75M 60/92 65.2% 92/94230402 0.0% 7/92 7.6% 156244848 33969707 +3233 chr4 + 190214555 160726524 160726523 160726593 70 AATATATATATATATATATATATATATATATATATATATATA------TACACACACACACACACACATATATGTA chr4 - 94230402 54293153 54293152 54293228 39937175 39937174 39937250 76 AATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ...::.:..x...:.......:...:.:...:xxx:...:..------.......x...::............:.. 42M6I28M 52/70 74.3% 76/94230402 0.0% 6/70 8.6% 106433371 83781184 +3211 chr4 + 190214555 160726526 160726525 160726597 72 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATGTATATA chr4 - 94230402 8395799 8395798 8395870 85834533 85834532 85834604 72 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.::...x.:..:...x..:....:...::x..:..xx...................x.:.:.x:.:x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 152330727 37883828 +3404 chr4 + 190214555 160726526 160726525 160726595 70 TATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATATGTATA chr4 - 94230402 8395801 8395800 8395870 85834533 85834532 85834602 70 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .::...x.:..:...x..:....:...::x..:..xx...:...............x...:.x...x... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 152330725 37883830 +3125 chr4 + 190214555 160726527 160726526 160726588 62 ATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATAT chr4 - 94230402 8395804 8395803 8395865 85834538 85834537 85834599 62 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 152330723 37883832 +3040 chr4 + 190214555 160726554 160726553 160726600 47 TATATATATATATACACACACACACACACACATATATGTATATATAT chr4 - 94230402 85546032 85546031 85546078 8684325 8684324 8684371 47 TATTTATATATATACACACACAGATACACACATAGAGCTATATGTAT ...x..................x.:.........x.xx.....:... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 75180522 NA +3083 chr4 + 190214555 160731844 160731843 160731933 90 TTCTTTCTCTCCCTTCCTTCCTCCCTCCCTCCTTCCCTTCCTTTTTTTCCTTCCT-TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 35294591 35294590 35294681 58935722 58935721 58935812 91 TCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC .:..:.:.:......x.x.:x.::..:.:.....:x...:...x...........-.:.x.::......xx.:x..x::...:.::.x.:. 55M1I35M 58/90 64.4% 91/94230402 0.0% 1/90 1.1% 125437253 64777302 +3189 chr4 + 190214555 160737585 160737584 160737632 48 TTGTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTGTTTTTTGAGATGG chr4 - 94230402 16915260 16915259 16915307 77315096 77315095 77315143 48 TTGGTTTTTGGTTGGTTGTTTTTTTTGTTTGTTTGTTTTTGGAAGTGG ...x......x...x......x..................x..::... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 143822325 46392230 +3014 chr4 + 190214555 160769658 160769657 160769718 61 AAAATATACACATATTGATACATTTTTGTCATATAAGTACACATGGCAAGCAGATGGAGCT chr4 - 94230402 43734557 43734556 43734617 50495786 50495785 50495846 61 AAATCACAGACATATTTTCGCATCTTTATCTTATTAATCCACATAGCCAGCAGATGGAGCT ...x:.:.x.......xx::...:...:..x...x.:.x.....:..x............. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 117035101 73179454 +3242 chr4 + 190214555 160809594 160809593 160809650 57 AAATCTCTCTCTCTCTGTACACACACACACACACACACACACACACACACAACCTGT chr4 - 94230402 44548678 44548677 44548734 49681669 49681668 49681725 57 AAATCTCTCTCTCTCTATACAGACACACACACGCATATATATTTATATAAAATGTGT ................:....x..........:..:.:.:.:x:.:.:.x..:x... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 116260916 73953639 +3101 chr4 + 190214555 160875723 160875722 160875773 51 CATTCCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTCGGCGTAG chr4 - 94230402 72884651 72884650 72884701 21345702 21345701 21345752 51 CAGTCTTGTCCCTCTTCCTTTCTTTTTTTTTTCTTTTTTTTTCTGGTGTGG ..x..:.x..::....:........:......:.........::..:..:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 87991072 NA +3092 chr4 + 190214555 160901094 160901093 160901159 66 AAAAACAAACAAAACAAAACAAAAACAAACAAACAAACAAAAAAACAACTGGTACAGAATGAGAAA chr4 - 94230402 57029813 57029812 57029878 37200525 37200524 37200590 66 AATAACAAACAAAACAAAACAAGAAACCCAAAACCAACAAAAAATCAACATGTAGAAATTAAAAAA ..x...................:..xxxxx....x.........x....xx...x.:.x.:.:... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 103871281 86343274 +3040 chr4 + 190214555 160901095 160901094 160901142 48 AAAACAAACAAAACAAAACAAAAACAAACAAACAAACAAAAAAACAAC chr4 - 94230402 79372168 79372167 79372215 14858188 14858187 14858235 48 AAAAAAACCAAAACAACACAAGAACAAACATACAAGCAAAAAAATCAC ....x..x........x....:........x....:........:x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 81528927 NA +3407 chr4 + 190214555 160901098 160901097 160901165 68 ACAAACAAAACAAAACAAAAACAAACAAACAAACAAAAAAA---CAACTGGTACAGAATGAGAAATAGAGA chr4 - 94230402 31704341 31704340 31704411 62525992 62525991 62526062 71 ACCACCAAAACAAAACTAAAACAAACAAACAAACAAAAAAAAACCAACTATTTCAAAGTAGGTACTAATGA ..x.x...........x........................---.....:x.x..:.:.::.x.x..:x.. 41M3I27M 54/68 79.4% 71/94230402 0.0% 3/68 4.4% 129196757 61017798 +3478 chr4 + 190214555 160901101 160901100 160901220 120 AACAAAACAAAACAAAAACAAACAAACAAACAAAAAAACAACTGGTACAGAATGAGAAATAGAGAGATGAAATAATGGAACATTCAGA-------------TCAGTAGAA-AAAACATGTAGTGGATCCAGACT chr4 - 94230402 53099314 53099313 53099446 41130957 41130956 41131089 133 AAAAAAAAACATCAAAAGAAAACAAACACACAAAAAAAGAAGTAGAACGGGAAGAGATATGAGGAAATGTAACAAGGGTAC-TCCAAAGCACAGAGCAGCTTCAGTACAAGAAAGTACGAGATAGGTCCCAACT ..x....x.x.x.....:x.........x.........x..x.:.x..:.:.x....x..:::..:...x..:..x..x..-.:..:.-------------......x..-...::.:.x::.:.:...x:... 81M1D6M13I9M1I23M 83/119 69.7% 133/94230402 0.0% 15/119 12.6% 107801787 82412768 +3482 chr4 + 190214555 160949823 160949822 160949964 142 ATAGATTGGAAACACTGTATTCAGGAAAGGGAGTAGGAGAGAGAAAAATACACACACACACACATATATGTATATAAACACAGATATATGTATACACACAC-----ACAGAGATATAACACTATATACATAGCTTGAAAAAGGTTTG chr4 - 94230402 71167156 71167155 71167301 23063102 23063101 23063247 146 ATAAATTGGTAAAAAGCCATAAAGTCATGGCTGTAAAAAAAA-AAAAATACACACACACACATATATATATATATAATTACAAGTATTCTTGCACAAGGGCTTATGACAAAAGCAGAAAGAAATCTCAATAGATGCAAAAAAGATTG ...:.....x..x.xxx:..xx..xx.x..xx...::.:.:.-...................:......:.......x:...::...x:x.::...x:x:.-----...:.:::.x..x:xx..x.xx....x.xx.....:.x... 42M1D58M5I41M 91/141 64.5% 146/94230402 0.0% 6/141 4.3% 89782667 NA +3268 chr4 + 190214555 160949857 160949856 160949927 71 AGGAGAGAGA-----AAAATACACACACACACACATATATGTATATAAACACAGATATATGTATACACACACACAG chr4 - 94230402 45271657 45271656 45271729 48958674 48958673 48958746 73 AGGAGAAAGATTGGAAAAAT---CACTAACTTCCATATCTATATATACACACATATATATGTATACAAACACACAG ......:...-----.....---...xx..x:x.....x.:......x.....x.............x........ 10M5I5M3D53M 57/68 83.8% 73/94230402 0.0% 8/68 11.8% 115678200 74536355 +3261 chr4 + 190214555 160988548 160988547 160988667 120 CCTATGATTGCACCACTGCCCTCCAGCCTGGGTGACAGAGCAAGGCCCTGTCTCAAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAGAAAAAGAAAAAAGAAAAAAGAATT chr4 - 94230402 66946886 66946885 66947005 27283398 27283397 27283517 120 CTTAACATTGCACCTGTTCCTGGAAACTCAAGTGACAATGCAACAACCTAATAAGTAACAAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTT .:..xx........xx.x..:xxx.:.::::......:x....x:x...:x:xx:x..x.x.x....x:...x.x........:.....:.....::.::....x.:x....x.:..x.. 120M 74/120 61.7% 120/94230402 0.0% 0/120 0.0% 94041662 NA +3229 chr4 + 190214555 160988594 160988593 160988658 65 CCTGTCTCAAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAGAAAAAGAAAAAAGAA chr4 - 94230402 6560710 6560709 6560774 87669629 87669628 87669693 65 CCTCCTTCAATAGACGCAGAAAAAGGAAAGAAAAAAAAATAGAGGACAAGAAACAGAAACCAGAA ...x::....x.:.:.x.:.....::...:.........x....:.x......x.....xx.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 154427884 35786671 +3611 chr4 + 190214555 160988597 160988596 160988691 95 GTCTCAAAAAATGAAAAAAAAAAAAAAAAAAAA---AAAAAGAGAAAAAGAAAAAGAAAAAAGAAAAAAGAATTGCTAGAATTGACATATAAACATGG chr4 - 94230402 75014883 75014882 75014980 19215423 19215422 19215520 98 GCCTTAAAGGATGGCAAAAGAAATAAAAAGAAGCTGGAGAATACAGAACTCAAGAAACAAAAGAATAAAGAATTGCTAGAATTAAAAAAAAAAAAAGG .:..:...::...:x....:...x.....:..:---:.:..x.x.:..xxx..:.:.x.......x.................:.x.x.x...x.x.. 33M3I62M 67/95 70.5% 98/94230402 0.0% 3/95 3.2% 85973714 NA +3044 chr4 + 190214555 160988611 160988610 160988685 75 AAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAGAAAAAGAAAAAAGAAAAAAGAATTGC---TAGAATTGACATATAA chr4 - 94230402 21660022 21660021 21660099 72570304 72570303 72570381 78 AAAACAAGAAGAGGAAAAACTGAAGAGAAAAGGAAAGAGAAATTATATAAAAGAATTGTAGGGAAGAGTAATATATAA ....x..:..:.::.....xx:.........:....:.....xx.x.x..........:---x.::.x.:.:...... 59M3I16M 54/75 72.0% 78/94230402 0.0% 3/75 4.0% 139328589 50885966 +3789 chr4 + 190214555 160998191 160998190 160998333 143 ATTTAAATTGTGCATGTATT----AAATAAATGTAGAATATTTATTTATTTATTTCATTACTGTTCTTTTTATTTCTAATTTTTTTGCCTTTGTTCTGAAAATTTTCTTTTGAGTAATAATTCAGTTCACTATTTCTCTTTCATTTG chr4 - 94230402 64819594 64819593 64819727 29410676 29410675 29410809 134 ATTTGAGTAATGAATACATTTGGAAAATCAATGTATAATTCATCTTTTTTTTTTTCTGTATTTAGTTTTTGATTTCTGATGTTTTTGCTTTTGCAAAATAATTGTTCTTT----TAATAGTTC---------TTTCTTTTTCACTTG ....:.:.x:..x..::...----....x......x...x:x.x...x...x....xx..:.xxx:....x......:..x.......:....:xxx:x..x.x......----.....:...---------.....:.....:... 20M4I86M4D9M9D15M 93/130 71.5% 134/94230402 0.0% 17/130 13.1% 96178597 94035958 +3266 chr4 + 190214555 161020729 161020728 161020809 81 TATTTACAGA---ATACACACACACACACACACACACACACACACACACGCAAAGATAAAGAAATCAAAGCACATCCATACAAA chr4 - 94230402 8395813 8395812 8395896 85834507 85834506 85834590 84 TATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAA ........x.---..:.x:...:xx.:.................x....:x.x::.....:..x:....x:....:.xx:.... 10M3I71M 58/81 71.6% 84/94230402 0.0% 3/81 3.7% 152624916 37589639 +3152 chr4 + 190214555 161022614 161022613 161022716 103 ACACTAAGTTTATATATACACATGTACATGTGTATACATACATACGTATATGTGTATATACACATATACGTATGTATGTATACACATATATATATATATTTTT chr4 - 94230402 68558004 68558003 68558103 25672300 25672299 25672399 100 ATACCGAGTTTGTA---AGAAGAATGCATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTT .:..::.....:..---.x.x:x:.:...:..:.:...x:...:.:...::........:::.....xx...x:.x.::.:x......:.:..x.x.x.:... 14M3D86M 63/100 63.0% 100/94230402 0.0% 3/100 3.0% 92464610 NA +3416 chr4 + 190214555 161022671 161022670 161022732 62 ATACACATATACGTATGTATGTATACACATATATATATATATTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 8681930 8681929 8681988 85548415 85548414 85548473 59 ATATAAATATATATATGTATGCACACACATACATATA---ACTCTTTTTTTTTTTTTGAAGA ...:.x.....::........:.:.......:.....---.:.:.............x:... 37M3D22M 48/59 81.4% 59/94230402 0.0% 3/59 5.1% 152340741 37873814 +3484 chr4 + 190214555 161022675 161022674 161022730 56 ACATATACGTATGTATGTATACACATATATATATATATTTTTTTTTTTTTTTTTGA chr4 - 94230402 8681930 8681929 8681985 85548418 85548417 85548473 56 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTTGA .:...x.::...:.......:....:.:...:.....x:.:............... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 152340745 37873810 +3216 chr4 + 190214555 161022688 161022687 161022731 44 TATGTATACACATATATATATATATTTTTTTTTTTTTTTTTGAG chr4 - 94230402 5683042 5683041 5683085 88547318 88547317 88547361 44 TATACACACACATACATATATATGATTTTTTTTTTTTTTTTGAG ...::.:.......:........:x................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 155339646 34874909 +3715 chr4 + 190214555 161052214 161052213 161052314 101 TTTTGTTGCCAATATATGCCTCTC--------------TCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACATATATATACACACACACAC chr4 - 94230402 80495374 80495373 80495488 13734915 13734914 13735029 115 TTTTGTTGTCAGTACTGGCATCTAATTTAAACAGTTAATTTGTGTCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACAC ........:..:..:xx..x...x--------------.:.x.x..:..:.x...:......x.:.......:.:.x.:.x....:.........x:.xxx:....x........ 24M14I77M 72/101 71.3% 115/94230402 0.0% 14/101 13.9% 80556840 NA +3018 chr4 + 190214555 161052273 161052272 161052313 41 ATATATATATATACACACACACATATATATACACACACACA chr4 - 94230402 45271688 45271687 45271728 48958675 48958674 48958715 41 ATATCTATATATACACACATATATATGTATACAAACACACA ....x..............:.:....:......x....... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 115780585 74433970 +3454 chr4 + 190214555 161063128 161063127 161063237 110 TGCTGCTCCTACTTCTCCTCCTTCCTCTTTTACCCTCTCCTTTTCTCTCTCCTCCTCCCTTTCTCTCTCTTTTTCTCTCTCCTCCTCCCTTTCTCTCTCTTTTTCTCTCT chr4 - 94230402 43081923 43081922 43082024 51148379 51148378 51148480 102 TGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCT--------CTCTCTGTAGCTTCTTCTTTCT .....::...x...:....::..::...:.:......:x:x..:.x:.::xx.:..xxx:....x.:.....:.......--------..:...x.xx...:....:... 80M8D22M 67/102 65.7% 102/94230402 0.0% 8/102 7.8% 117981205 72233350 +3798 chr4 + 190214555 161086999 161086998 161087151 153 TTAGGTGA-TGTCAGGGAAGATTGTAAACCCATAGTACTCGACCAATGAGGAACTGGGCGAGGGAGTTATGAGC---------TAGGAGATAAATTACCTGCTGTAAC------TGCCCCAGGTGTGCCTGCCTACCAGGCACCCAATCTAGCAAAACCGCCATTAAAA chr4 - 94230402 80808731 80808730 80808891 13421512 13421511 13421672 161 TTAGCTGAGCGTCAGG-AAGATTGTGAACCTGAAGTACTCAGCCAATGAGGAACCAGGGGAGGAAGAGAAAAGCACTGGGTAATAGGGCATAAA-----AGATGCAACACTGTTTTCTGCATGTGCTCCTGCTTGCAGGACGCCCG--CTACTGCAATTGCAAATAAAA ....x...-:......-........:....::x.......::............::..x....:..xx.x:...---------....:x.....-----x.x..:...------.x.:x..x...:x.....:.:.x:.:.:...:--...x::x..::..x.x..... 8M1I7M1D57M9I11M5D9M6I32M2D21M 103/145 71.0% 161/94230402 0.0% 24/145 16.6% 80278268 NA +3072 chr4 + 190214555 161149544 161149543 161149612 69 ACTTTTTTTTTTTTTTTTTTTTTTTTTGAGGGAAAGCCTGGAGGCAGAGATTCTTGTTCTCTTCCCTTA chr4 - 94230402 36437350 36437349 36437418 57792985 57792984 57793053 69 ACTCTGTTTTTTTTTTCTTCTTTTTTTGGGGGGGGGCGTGGGGGGGGCTATTCCAGTGGTACTTCCTTA ...:.x..........:..:........:...:::..x...:..x:.xx....:x..xx.x:.:..... 69M 48/69 69.6% 69/94230402 0.0% 0/69 0.0% 124712194 65502361 +3128 chr4 + 190214555 161176024 161176023 161176100 77 AGATTGTACACACACACACACACACA------TGTACACACATACATTTATGTAAGCTAGATGGATAGATAGATAGATAGATA chr4 - 94230402 61485370 61485369 61485452 32744951 32744950 32745033 83 AGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATAGATAGGTGTACA ...x.:....:...:.......::..------...::.:::..::......:.xxxx......x............:.:x.:. 26M6I51M 54/77 70.1% 83/94230402 0.0% 6/77 7.8% 99690654 90523901 +3642 chr4 + 190214555 161177684 161177683 161177747 64 ACATGCACACACTTGCACACACGCACACGCTTGCACACACACACACACACACATATATATATAT chr4 - 94230402 89016082 89016081 89016145 5214258 5214257 5214321 64 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGAT .::........::....::...:......:....:........::..x.::....:.::..x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 72161602 NA +3092 chr4 + 190214555 161267489 161267488 161267574 86 TTTTTCTTTTTTTCTTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGAGACAAAGTCTTACTCTGTCACCCA chr4 - 94230402 15259919 15259918 15259998 78970405 78970404 78970484 80 TTTTTCTCTTTCCATTTTGTTTTCTGTTTAGCTTCTGCTTGTTTTTTTCTTTTTT------AGACAAAAATGAACTCTGGCAATCA .......:...::x....x......x...xx:....x:.:x.......:......------.......:x:xx......x..x:.. 55M6D25M 58/80 72.5% 80/94230402 0.0% 6/80 7.5% 146007570 44206985 +3407 chr4 + 190214555 161267491 161267490 161267570 80 TTTCTTTTTTTCTTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGAGACAAAGTCTTACTCTGTCA chr4 - 94230402 56101373 56101372 56101452 38128951 38128950 38129030 80 TTCCTTATTTTCTTTTTCTTTATTTTTTCTTTCTGTTTTTATTGCCTTTTCTAGTTGCAAAACATGATCTTATTGTGTTA ..:...x..........:...x.....::.....x..:..x..x::....:.xx..x::.:...x::.....:.x...:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 105166118 85048437 +3003 chr4 + 190214555 161287970 161287969 161288005 36 AGAAAAAACAAAACAAACAAACAAAAAAAAACAGAA chr4 - 94230402 70657710 70657709 70657745 23572658 23572657 23572693 36 AAAAAAAACAAAACAAACAAACAAACAAAAACAGAA .:.......................x.......... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 90630260 NA +3029 chr4 + 190214555 161294410 161294409 161294453 44 AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAACACCTGAA chr4 - 94230402 25247412 25247411 25247455 68982948 68982947 68982991 44 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCTTGAA ...............:...:...:.....:.x.....x.:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 136046998 54167557 +3052 chr4 + 190214555 161310693 161310692 161310733 41 TATATAATAACTGTGTGTGTGTGTGTGTGTGTGTGTGTATA chr4 - 94230402 9334558 9334557 9334598 84895805 84895804 84895845 41 TATATAGGAACTGTGTGTGTGTGTGTGTGTATGCCTGTATA ......:x......................:..:x...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 151976135 38238420 +3197 chr4 + 190214555 161333392 161333391 161333461 70 TATATATACACACACATATATGTATATATGTATACATATATATCTCATATACATATATATCTATCTGTAT chr4 - 94230402 50941876 50941875 50941945 43288458 43288457 43288527 70 TATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTTTAT .......:....x...:....:.::..x.:..:.::.......:.::x.......::...::xx..x... 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 110391516 79823039 +3020 chr4 + 190214555 161374059 161374058 161374102 44 CATAATAAATACATTTATTTTTCCATTATAATTGTCTTTAAAGC chr4 - 94230402 66493731 66493730 66493774 27736629 27736628 27736672 44 CATAAAAAATAAATCTGTTTCTCCATTATAATTATCTTTAAAAC .....x.....x..:.:...:............:........:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 94880328 NA +3416 chr4 + 190214555 161380194 161380193 161380257 64 TGTCCCTAGATGTATTTTCACTTTTGTATGCTCAAATTAAAACACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.x..:.::.:.x..:..x.x.......::.x.....x.................x..... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 152984395 37230160 +6944 chr4 + 190214555 161438499 161438498 161438785 287 TTGCTGATGATTAAAAAAAGC-TGCCCAGTTAGCTTCTCATATAGCTACAGAATGATG-TTTTTACAATTTCTCATGATAAAAGTATTTATAAAATTCTAAAGAACACCCGAAATTATT--TTCAGTTCTATAATTCATAAAAGTAAATGAACAAAATATAATTGAATTGAACTAAACTATATCAATA-----CTGTACAAGGATTCAAAATTAAAATTAAATTGATGAATCAAATGTAATGAAGTAACTATGATATTGCAAATGA-TTAATTTTTTTACAAAC----TAACTATTATATA chr4 - 94230402 70331248 70331247 70331542 23898861 23898860 23899155 295 TTTCTTATAATAAAAATAGACATTTGCAATTAGTATGTGGGATGGCTGTAAAAAGATGACTTGTACAATG-CTCATGA-AAATATATTCTTAGAAGCCTAAGGAGCAAAAGTGCTGATTATTTCAGCTTCATTGTTCATAAATTGAAGTGAACAAAAGATAATTGGAATAAATTAAGGTCTATCATTACACTGCTGTAAAATGTTTCAAAAGCAATATTAA----ATGAACTCACTGTAATGGAGTCACACTAACTTTTTAGATGGTTTAATCTTTTAGCAAGCATTTTAAATGTGATACA ..x..x..:..x....x.::.-.x:x..:....:x.x.x:x..:...::.:..x....-:..x......x-.......-...x:....:x..:..x:....:..:..xxx.x:x.x...--.....:.::..x:........xxx..:.........x.......:.x.:..:...:x.x.....x..-----.....x..x.x.......x:..x.....----.....::x.x.......:...x..xx.:.:x..x:.:...:-.....:....x:...:.----...x.:.x...:. 21M1I36M1I11M1D7M1D40M2I67M5I28M4D41M1I17M4I13M 193/281 68.7% 295/94230402 0.0% 20/281 7.1% 91107251 NA +3115 chr4 + 190214555 161440316 161440315 161440398 83 TGTCCAAACTTTTGGCTTCCCTGGGCCACAATGGAAGAAGAAGCATTGTCCTGGGGCACACATAAAA----TACACTAACACTAATG chr4 - 94230402 9885863 9885862 9885949 84344454 84344453 84344540 87 TATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGAaggttgctctgaaagtaatg .:.....x...:..x........:.........::x...x.:.x...::.:x...x::..:x...:.----.:.x..:.x.x..... 67M4I16M 57/83 68.7% 87/94230402 0.0% 4/83 4.8% 151554453 38660102 +3098 chr4 + 190214555 161460212 161460211 161460266 55 TTTCTTTTTTTTCTTTTTTCTTTTCTTTTTTATTATTATTATTATACTTTAAGCT chr4 - 94230402 60257195 60257194 60257249 33973154 33973153 33973208 55 TTGCCTTTTTTTCTTTTTTCTTTTGTTTTTTATTGTGTTTATCATCCTATGTGCT ..x.:...................x.........:.xx....:..x..x.:x... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 101203017 89011538 +3328 chr4 + 190214555 161461473 161461472 161461532 60 AAAAAAAAAAAAAAAAAAGAGGAAAACCCAATACTTTGAGGGTGCAGAGGAGAAAAATAA chr4 - 94230402 92162698 92162697 92162757 2067646 2067645 2067705 60 AAAAAAAAAAAAAAAAAAGCATAATACCAAATACTTGGGGGTGGCATGGCAGAAAAATAA ...................x:x..x...x.......x.:..xx...x:.x.......... 60M 48/60 80.0% 60/94230402 0.0% 0/60 0.0% 69298775 NA +3146 chr4 + 190214555 161476157 161476156 161476202 46 TTCTTCAAGTTTGCTGGTTTTTTTTTTTTTTTGTTTGTTTGTTTTT chr4 - 94230402 67214694 67214693 67214739 27015664 27015663 27015709 46 TCCTTAAAATCTGTTGGGTTTTTTTTTTGTTTGTTTGTTTGTTTTT .:...x..:.:..:...x..........x................. 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 94261463 NA +3019 chr4 + 190214555 161476158 161476157 161476197 40 TCTTCAAGTTTGCTGGTTTTTTTTTTTTTTTGTTTGTTTG chr4 - 94230402 10472040 10472039 10472079 83758324 83758323 83758363 40 TCTTCGGGTTTTTTGGTTTTTTTTTTTCTTTGTTTGTTTG .....::....x:..............:............ 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 151004118 39210437 +3294 chr4 + 190214555 161476169 161476168 161476240 72 GCTGGTTTTTTTTTTTTTTTGTTTGTTTGTTTTTTTGAGAAAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGT chr4 - 94230402 39858688 39858687 39858759 54371644 54371643 54371715 72 GTTGTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGGACAATGACTGTTACTTTGGCTGCCTATGCCAAAAT .:..x......x..x..x.................x..x..x..x.x..:..:.x.:....:.x..:::.:. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 121617481 68597074 +3157 chr4 + 190214555 161476174 161476173 161476218 45 TTTTTTTTTTTTTTTGTTTGTTTGTTTTTTTGAGAAAGAGTTTTG chr4 - 94230402 24395733 24395732 24395777 69834626 69834625 69834670 45 TTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTAAGAAACAGCCGTG ..........x....................:.....x..::x.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 137080441 53134114 +3022 chr4 + 190214555 161513263 161513262 161513324 62 CAAGGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGGAAGAGGAG chr4 - 94230402 82145324 82145323 82145385 12085018 12085017 12085079 62 CAGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAGTGGGG ..:x....:..:.:......:....:.........::..x..:.x.:xx::......x..:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 79367939 NA +3008 chr4 + 190214555 161513279 161513278 161513342 64 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGGAAGAGGAGGAGGAGGAGGAGAAAGAG chr4 - 94230402 17078265 17078264 17078328 77152075 77152074 77152138 64 GGGGGGGAGGGGGAGAGAGAGAGAGAGAGTTACTCAGGGAGGAGAGAGGGCAGAGATGCAAAAG .:.:.:...:.:.................xx..xx...:..::...::..x:...:x.x..:.. 64M 44/64 68.8% 64/94230402 0.0% 0/64 0.0% 144435014 45779541 +3324 chr4 + 190214555 161516693 161516692 161516748 56 TTTATTATATGTAAATATATATATATATATGTACACACACACACACACACACACAC chr4 - 94230402 88147175 88147174 88147230 6083173 6083172 6083228 56 TTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ...x...:......:x................x:::::.::.:............. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 73369518 NA +3291 chr4 + 190214555 161516698 161516697 161516760 63 TATATGTAAATATATATATATATATGTACACACACAC--ACACACACACACACACACACACACAA chr4 - 94230402 8395799 8395798 8395863 85834540 85834539 85834604 65 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAA .:.:::....:..:...x..:.......::.x:...:--.:.................x...... 37M2I26M 48/63 76.2% 65/94230402 0.0% 2/63 3.2% 153120899 37093656 +3558 chr4 + 190214555 161539680 161539679 161539746 67 AACTGTATTCT---AAATACAAACCAACAACAACAACAACAAAAAAGAAAGCAAAAAC-----AAAAACAAAAAA chr4 - 94230402 13051443 13051442 13051517 81178886 81178885 81178960 75 AACTATATCCTTAAAAAAACAAACAAACAACAACAACAACAAAAAACAACGCAAAACCTGAGTGAAAACACAAAA ....:...:..---...x......x.....................x..x......x.-----:......x.... 11M3I44M5I12M 58/67 86.6% 75/94230402 0.0% 8/67 11.9% 148488237 41726318 +3044 chr4 + 190214555 161556817 161556816 161556850 34 ATTATATATATATGTGTGTGTGTGTGTGTGTATA chr4 - 94230402 27034824 27034823 27034857 67195546 67195545 67195579 34 ATTATATATATATGTGTGTGTGTGTGTGTATATA .............................:.... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 134521993 55692562 +3909 chr4 + 190214555 161566081 161566080 161566151 71 TTTTTTCTTTTTTTTTGGACTATATATATATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147164 88147163 88147230 6083173 6083172 6083239 67 TTTTTTTTTTTTTTTT----TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ......:.........----..:..:..x:x..............:.x.:.:...:.:............. 16M4D51M 55/67 82.1% 67/94230402 0.0% 4/67 6.0% 73418917 NA +3174 chr4 + 190214555 161572315 161572314 161572366 52 GTCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGA chr4 - 94230402 6438506 6438505 6438557 87791846 87791845 87791897 52 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGA ....x.....:.....::.............:::..::...:....x:.... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 155133809 35080746 +3045 chr4 + 190214555 161572316 161572315 161572371 56 TCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAAGAA chr4 - 94230402 88558242 88558241 88558297 5672106 5672105 5672161 56 TCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAAACAAA ...x.....:.x..................:.x.:.:.:.:.:.x....:..x:.. 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 73014074 NA +3235 chr4 + 190214555 161572325 161572324 161572399 75 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAAGAAGAAGAATGCACTGATTATGACCCCTGAC chr4 - 94230402 37322393 37322392 37322457 56907946 56907945 56908010 65 AAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGA-----AAGGGTGGACT-----TGACCACTGAC .....:........................:::x.:.:...:.-----...::..x...-----.....x..... 43M5D11M5D11M 53/65 81.5% 65/94230402 0.0% 10/65 15.4% 124249932 65964623 +3129 chr4 + 190214555 161572328 161572327 161572368 41 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAAGAGAAA chr4 - 94230402 87676347 87676346 87676387 6554016 6554015 6554056 41 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ...............:..................x:.x... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 73895981 NA +3116 chr4 + 190214555 161573395 161573394 161573448 54 ACAGACTAAAACCCTGTCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAA chr4 - 94230402 78791804 78791803 78791857 15438546 15438545 15438599 54 ACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAA ...:.x:...xxx.....x...::...........:...........:..:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 82781591 NA +3215 chr4 + 190214555 161573407 161573406 161573454 48 CCTGTCAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGAAAAT chr4 - 94230402 87676341 87676340 87676388 6554015 6554014 6554062 48 CCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAAT ...::................:.:.............x..x.:x.... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 73897066 NA +3044 chr4 + 190214555 161573414 161573413 161573463 50 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGAAAATAAAGCCAGG chr4 - 94230402 94076895 94076894 94076944 153459 153458 153508 50 AACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAAGCCAGG ..x..x..x.....................x.:.::x....x........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 67496519 NA +3651 chr4 + 190214555 161573414 161573413 161573462 49 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGAAAA------TAAAGCCAG chr4 - 94230402 48383086 48383085 48383140 45847263 45847262 45847317 55 AAAAAAAAAAAAAAAAAAGAGAGAGAGAGATAAAAGGCAACCAGCTTAAAGCCAG ....................................:x..------......... 40M6I9M 47/49 95.9% 55/94230402 0.0% 6/49 12.2% 113190328 77024227 +3142 chr4 + 190214555 161573729 161573728 161573791 63 AGCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAATGAAAGAAAGACACATAGAAAAGA chr4 - 94230402 61875812 61875811 61875874 32354529 32354528 32354591 63 AGCTTGAAAAAGAAAAAAGAAGAAAAAAAGAAAATTAATTTAAACAAAGCTGAAGAGAAAGGA ....::.....:......:..:............xx..x.x...x....x::x.x.....:.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 99697917 90516638 +3147 chr4 + 190214555 161574317 161574316 161574376 60 CATGACTTTCCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTAAATTTTACTTTAAGTTCTG chr4 - 94230402 16390117 16390116 16390176 77840227 77840226 77840286 60 CATGACCCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATTTTTAGTTCTG ......:::::xx..........:...:..:.......::x....x..:...x....... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 145184200 45030355 +3030 chr4 + 190214555 161589156 161589155 161589199 44 TTGTTGGTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAG chr4 - 94230402 16311206 16311205 16311249 77919154 77919153 77919197 44 TTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTTTTGCTGTAGAG .......x....x.......................xx:.:... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 145277950 44936605 +3079 chr4 + 190214555 161602234 161602233 161602294 61 AGTGAGAGAGAGGGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG chr4 - 94230402 82145325 82145324 82145385 12085018 12085017 12085078 61 AGTGAGGAGGGGGGAGAGAAAGAGGGAGAGAGAGGAAGTGAAACAACAGAAGGAAGTGGGG ......:::.:.............:.........::..x..:.x.:x:::..::..x.:.. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 79456909 NA +3021 chr4 + 190214555 161611197 161611196 161611271 75 TGTATATATATGTGTATATGTGTGTATGTGTATACATATATATATATATATATATATATATAT-----ATATATATGTAA chr4 - 94230402 1888770 1888769 1888849 92341554 92341553 92341633 80 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAA ..x.....:..:....:.xxx...:x.x...:..........:....:x..x.:.:.......-----...x....x:.. 63M5I12M 55/75 73.3% 80/94230402 0.0% 5/75 6.7% 159722427 30492128 +3021 chr4 + 190214555 161611197 161611196 161611271 75 TGTATATATATGTGTATATGTGTGTATGTGTATACATATATATATATATATATATATATATAT-----ATATATATGTAA chr4 - 94230402 1885629 1885628 1885708 92344695 92344694 92344774 80 TGAATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATATTTTGCATAGATATTCAA ..x.....:..:....:.xxx...:x.x...:..........:....:x..x.:.:.......-----...x....x:.. 63M5I12M 55/75 73.3% 80/94230402 0.0% 5/75 6.7% 159725568 30488987 +3011 chr4 + 190214555 161644515 161644514 161644584 70 AAACTCTGTCTCAAAAAAAAAAAAAAGAACAGTAGTAATAAAACAATGGAATCAGAGAACAGCTTGTGTT chr4 - 94230402 51458587 51458586 51458656 42771747 42771746 42771816 70 AAAATATTTACCAAAAAAGAAAAAAAGAACAACAACAACAAAACACTGTACTAAGGAAACAACCTTCATT ...x.x.x.x:.......:............::.::..:......x..x.x.x..::....:.:.x::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 110185928 80028627 +3482 chr4 + 190214555 161686289 161686288 161686366 78 CCTCTTTCTCCTTTGCCATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757837 42757836 42757913 51472490 51472489 51472566 77 CTTCTTTCACTTTT-CCTCATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT .:......x.:...-..x:....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 14M1D63M 57/77 74.0% 77/94230402 0.0% 1/77 1.3% 118928452 71286103 +3495 chr4 + 190214555 161686300 161686299 161686377 78 TTTGCCATATATA----TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681923 56681922 56682004 37548399 37548398 37548480 82 TTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ...x:..:.....----.x:......x:.:....x:.:...:....:..x:.......x...x...x....x.......... 13M4I65M 59/78 75.6% 82/94230402 0.0% 4/78 5.1% 105004377 85210178 +3328 chr4 + 190214555 161686302 161686301 161686361 60 TGCCATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681924 8681923 8681983 85548420 85548419 85548479 60 TGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..:.xx.....x..........:...::.:.:.:...:.....xx.:............. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 153004378 37210177 +3222 chr4 + 190214555 161686306 161686305 161686359 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 153004376 37210179 +3187 chr4 + 190214555 161686308 161686307 161686385 78 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 71863027 71863026 71863104 22367299 22367298 22367376 78 ATATCTATTTGAAAATGAATATTTATACACTTGAAAATACTTTTCTGTTTCTATTTTTTTTTTTTTTTTCTGCTGGAG ....x...x.:x.x..:x....x....:.:x.:x.x...:....:.x...:.x................xx.x..... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 89823281 NA +3068 chr4 + 190214555 161686311 161686310 161686366 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 68950963 NA +3282 chr4 + 190214555 161686313 161686312 161686368 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 68950965 NA +3107 chr4 + 190214555 161686315 161686314 161686376 62 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865515 89364888 89364887 89364949 62 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTT ..x.x..............x.:x.x...x.x.x.:.........x..x....x......... 62M 49/62 79.0% 62/94230402 0.0% 0/62 0.0% 156820861 33393694 +3496 chr4 + 190214555 161686315 161686314 161686370 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 68950967 NA +3516 chr4 + 190214555 161686317 161686316 161686399 83 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTATCTCTCTGTCGC chr4 - 94230402 92735348 92735347 92735422 1494981 1494980 1495055 75 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGA--------ATCTCCATGTGGC .::....x.....:...:..:.:........x......:.x.........:.x...:::...--------.....:x...x.. 62M8D13M 57/75 76.0% 75/94230402 0.0% 8/75 10.7% 68950969 NA +3068 chr4 + 190214555 161686319 161686318 161686374 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 68950971 NA +3121 chr4 + 190214555 161686319 161686318 161686372 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 157486045 32728510 +3423 chr4 + 190214555 161692799 161692798 161692872 74 CTGCAACCTCCAACTCCCTAGTTCAAGTGATTCTCCTGCCTCAGCCTTACAAGTAGCTAGGATTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.:..:.:x:.........x...x.xx.x.........x.........:.:.:....x.::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 143495673 46718882 +3050 chr4 + 190214555 161695420 161695419 161695468 49 TGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATCACATA chr4 - 94230402 48089505 48089504 48089553 46140850 46140849 46140898 49 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTACACA ....::.::::........:....x.x................:...:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 113605915 76608640 +3146 chr4 + 190214555 161705939 161705938 161706002 64 TGTGTAGATGTGTGTATATATATATATATATATATATATATATATATATATATATATACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......x..::x........:..::.:.x......xx:.:.....:.:...:...x:....... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 124342899 65871656 +3133 chr4 + 190214555 161739840 161739839 161739878 39 ACTCCACAGAAGTAAAAAAAAAAATTGTTGAGATAATAT chr4 - 94230402 16577828 16577827 16577866 77652537 77652536 77652575 39 ACTCCACAGAAGTAAAAAAGAAGACTGTTGAAATAATAT ...................:..:.:......:....... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 145162012 45052543 +3072 chr4 + 190214555 161782857 161782856 161782915 59 CAATAAAGATGTTCTAGTATCCAGGTAACTTTGCTCTTTTAACCCTGAGAGAATGTTAA chr4 - 94230402 55411935 55411934 55411993 38818410 38818409 38818468 59 CAATGAAATTATTCCATCATCTAGGTAACTTTCTTTTTTTAAACTTGAGGGTATGCTAA ....:..:x.:...:.x:...:..........x:.:......x.:....:.x...:... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 106370922 83843633 +3601 chr4 + 190214555 161783554 161783553 161783628 75 TTCTTTCTTTTCTTTTCTTTCTTTGC---TTTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTC chr4 - 94230402 56151550 56151549 56151626 38078777 38078776 38078853 77 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTT-TTTCTTTCTTTCCCTTTTTCTTACTC ..:...:.....:x..:.:...x..x---..:......x...:..x..:..-............:.........x... 26M3I22M1D26M 59/74 79.7% 77/94230402 0.0% 4/74 5.4% 105632004 84582551 +4182 chr4 + 190214555 161783559 161783558 161783744 186 TCTTTTCTTTTCTTTCTTTGCTTTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTT---------TCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTT---TCTT------TCTTTCTTTCTTTC-----------TTTCTTTCTTTCTTTCTTCTTTTCTTTTCTTTCTTTC chr4 - 94230402 28459066 28459065 28459277 65771126 65771125 65771337 212 TTTTTTTTTTACTGACTTTATT---ATTGCTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTC .:....:...x..xx....::.---x........:x.:.:::.:x:.:x....:..:...::..:.---------.:..x:...xx.::.......::::xx...:.x.x:..:...:.....:x........:....:.---....------.x......x..xx.-----------.....x.....x...x::..x...:.:.x::.:.... 22M3D41M9I65M3I4M6I14M11I37M 120/183 65.6% 212/94230402 0.0% 32/183 17.5% 133324493 56890062 +3787 chr4 + 190214555 161783572 161783571 161783747 176 TTCTTTGCTTTCCTTGCTTTCCTTGCCTTTCT----------TTCTTTCTTTCTCTTTTTC--TTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTT---CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTCTTTTCTTTCTTTCTTT chr4 - 94230402 92912796 92912795 92912987 1317416 1317415 1317607 192 TTTTTGGCATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCT ..:..x..x..:...x::::.x...::..x..----------:..:..xx:....:.....--..:.xx.xx..x::...:......xxx..:xxx......:.:x:..---..:...:.::.:.:.:.:..xx..:x:..:.-:....:x:...xx:.x.......::.....:......:.....:..:. 32M10I19M2I46M3I31M1I48M 109/176 61.9% 192/94230402 0.0% 16/176 9.1% 68870776 NA +3211 chr4 + 190214555 161783575 161783574 161783648 74 TTTGCTTTCCTTGCTTTCCTTGCCTTTCTTTCTTTCTTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCT chr4 - 94230402 27426810 27426809 27426883 66803520 66803519 66803593 74 TTTGTGTCCTGTTCTCTCCTTACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCTGCTTTATCT ....:x.:.:x.x..:.....:...x::x::.:.:....:....:......:.:.......:::.x....x... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 134356765 55857790 +3142 chr4 + 190214555 161783594 161783593 161783672 79 TTGCCTTTCTTTCTTTC-----TTTCTCTTTTTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTT chr4 - 94230402 15446139 15446138 15446222 78784181 78784180 78784264 84 TTGCCTCTTCTTCCCTCCAGTATTGCCTTTTTTCTTTCGTTTTGTTTTTTCTCTTTGCCTTGCTTTCCCTCAATCCCTTTTGTT ......:.::...::..-----..x.::..........x:...x....:.:.....x:..:x.....::..xx..:....:x.. 17M5I62M 55/79 69.6% 84/94230402 0.0% 5/79 6.3% 146337455 43877100 +3185 chr4 + 190214555 161783620 161783619 161783702 83 TTCTTTCTCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTT---CTTTCTTT chr4 - 94230402 72415627 72415626 72415712 21814691 21814690 21814776 86 TTTTCTCTCTTTTTGCTCTATATTTCTCTGGCTATTCTTTTATGTTTTTCTTTCTTTCCCTCCCTTTGGTGCTCTGCAGTTTCTTT ..:.:.......:.x:...x.x.......xx..x.::..:.x.x.:............:..::....xx.x..:.---x....... 75M3I8M 59/83 71.1% 86/94230402 0.0% 3/83 3.6% 89367993 NA +3156 chr4 + 190214555 161783627 161783626 161783712 86 TCTTTCTTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 18988811 18988810 18988896 75241507 75241506 75241592 86 TCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT ..x..x.::::.x.x...:x..:...:.xx.:..x.:.:..........:..:.........x...x.xx...:.x:..:..x... 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 142794816 47419739 +3848 chr4 + 190214555 161783632 161783631 161783773 142 CTTTTCTTTCTTTCTCTCTCTTTCT---TTC---TTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTT--------------CTTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTCTTT chr4 - 94230402 45185582 45185581 45185743 49044660 49044659 49044821 162 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x.:x:..x..:..:.....:..---:..---.....x:...x........:..::..:x...:.:x.:..::..........xx:....:.:..::..x:..--------------...x.......xx.:x:.::.xx.:::..x:.::......... 25M3I3M3I71M14I43M 93/142 65.5% 162/94230402 0.0% 20/142 14.1% 116598050 73616505 +3009 chr4 + 190214555 161783647 161783646 161783722 76 CTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 33641713 33641712 33641788 60588615 60588614 60588690 76 CTCTCATACTTTCTTCCTCTATCCTGTTTTCTCACTCACTTTCTCTTTAAAGCTTTTTTTGTTGCTGTTGTTCTTT .....x.x.......:....x..:.x:......x:..x:.:.:.....xxxx....:...x..x..x.:x...... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 128141934 62072621 +3150 chr4 + 190214555 161783660 161783659 161783724 65 TTTCTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45597713 45597712 45597777 48632626 48632625 48632690 65 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCT .:...:....x.....:.x...:...:.x...::.....:::::.x......:..::.x...... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 116185947 74028608 +3003 chr4 + 190214555 161812869 161812868 161812928 60 TAAATCCCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTACGTTTTAGAAGAATAA chr4 - 94230402 50240861 50240860 50240920 43989483 43989482 43989542 60 TAGATCCAAGAAGGAAAAAAAAAAAAAGAAAAAAACAATCATTATTTTTTTGAAGTTTAA ..:....x..x.::.............:.......x..xx....:x....x....xx... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 111572008 78642547 +3134 chr4 + 190214555 161825840 161825839 161825932 93 TTTTTGTTTCATTTATCTTTTGTATTTTTTTATTTCATTTAGTTCTGCTTTGATCTTCATTATTTCTTTTTTTCTGTTGGGT-TTGTCTTTGGT chr4 - 94230402 64117869 64117868 64117962 30112441 30112440 30112534 94 TTTTTGTTGCACTTCTCTTTTATATTTTCTTTTCTCCTTAGAACCTTCTTTGTACTTAGCAGTTTTTCCTTTTTAATTAGTTCTCTTCTTTGGT ........x..:..x......:......:..x.:..x..x::x:..x.....xx...x::x:...:.::....:x:..:.x.-.:x........ 82M1I11M 62/93 66.7% 94/94230402 0.0% 1/93 1.1% 97707971 92506584 +3174 chr4 + 190214555 161900647 161900646 161900696 50 AAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAAAAAAAGAATGG chr4 - 94230402 32280614 32280613 32280663 61949740 61949739 61949789 50 AAAAAAAAAAAAGAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGG ........................::...x.xx.:...:..x...:.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 129620033 60594522 +3035 chr4 + 190214555 161977624 161977623 161977669 46 AAAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATAATAAA chr4 - 94230402 46873543 46873542 46873588 47356815 47356814 47356860 46 AGAAGAAAAAAAAAAAAGTAATTATAATAATGATAACAATGATCAA .:..:............:....x........:....:...:..x.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 115104081 75110474 +3917 chr4 + 190214555 161980042 161980041 161980165 124 TGAAGGAAAGAAAGAGAAA----AAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAA chr4 - 94230402 45355410 45355409 45355537 48874866 48874865 48874993 128 TAAGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .:.:.......:.x.x...----.::...x.:...:..x:.:....:...:x..x.:.x.:.:.:..:x.:.x......x..........x.....xxx.x....::..:xxx:x..x:....:.... 19M4I105M 81/124 65.3% 128/94230402 0.0% 4/124 3.2% 116624632 73589923 +3373 chr4 + 190214555 161980057 161980056 161980111 55 GAAAAAGAGAAAGAGAGAAAGAAAGAAAGAAAAAAGAAAAAGAAAGAGGAAGGAA chr4 - 94230402 3302524 3302523 3302578 90927825 90927824 90927879 55 GAGGAGAAGAAAAAGAGAAAAATTGAAAGAAAAAAAAAAAAGAATGGGGGAGGAA ..::.::.....:.......:.xx...........:........x.:..:..... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 158677533 31537022 +3923 chr4 + 190214555 161980082 161980081 161980262 181 AAAGAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAGAAAAAGAAAGAGAGGAGGAGACAAGGAAGGAGAGAGAGAAAAAGGAAAGGAAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAA chr4 - 94230402 21758891 21758890 21759061 72471342 72471341 72471512 171 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAA----------AGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ....:.:xx.....::..::...x....:.:.....:::.xxxx..x:.x:.:x:x.x...x...x.....:...x:x..x..x.:..----------..:x.x..x....:..::.:...:.::....:.:.:.:.:.x..:x...:..xxx........:xxx.x.:..::...:.x.. 88M10D83M 102/171 59.6% 171/94230402 0.0% 10/171 5.8% 140221191 49993364 +3125 chr4 + 190214555 161980085 161980084 161980167 83 GAAAAAAGAAAAAGAAAGAGGAAGGAAGGAGAGAAAAGGAAAAGAAAGAAAGAGAAAAGAAGGATAAAGATAAAGAAAGAAAG chr4 - 94230402 83151432 83151431 83151514 11078889 11078888 11078971 83 GGAAAGAGACAAAGATGGAGGAAGGAAGGGTCAAGTGGGAAAGAAAACAGCAAGATATGAAAGCCAAAGATGAGTCAGAAAAG .:...:...x.....x:............:xx:.:x:.....::...x.:x:...x.x...:.x:......:.:xx.::.... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 78828653 NA +3558 chr4 + 190214555 161980138 161980137 161980294 157 GAAAAGAAGGATAAAGATAAAGAAAGAAAG----AAAAAGAAAGAGAGGA---------------------GGAGACAAGGAAGGAGAGAGAGAAAAAGGAAAGGAAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAA--------GAAAGAAAGAAAGAGAAA chr4 - 94230402 44400405 44400404 44400594 49829809 49829808 49829998 190 GGAAAAAAGCCTACAGAAAATGGAAAAATGCACTGAAATGAAAGGGAGGATCGTTTTTGTGCCCAGCTCCAAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA .:...:...xx..x...x..x.:..:..x.----:...x.....:.....---------------------::.:....:.x:x.x.x.x...::.::..:::...:.....:..:.......:..::..:...:x:..x.:...x..:xx.x.:.:..x.:..--------::..:..xx.:....... 30M4I16M21I93M8I18M 100/157 63.7% 190/94230402 0.0% 33/157 21.0% 117579733 72634822 +3108 chr4 + 190214555 161980201 161980200 161980296 96 GAGAGAAAAAGGAAAGGAAAGAAGAAAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGA chr4 - 94230402 25255625 25255624 25255720 68974683 68974682 68974778 96 GGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGTAGA .:..::.x.:......x.:.:x.x.x.:...:.xx...x.:......:x:x..:...:......:...:.::..xx...::.x.....::::x... 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% 136724576 53489979 +3102 chr4 + 190214555 161980226 161980225 161980269 44 AAGGAAGAAAGAAGAAAGGAAGAAGGAAGAAAGAAAAAAGAAAG chr4 - 94230402 89405205 89405204 89405248 4825155 4825154 4825198 44 AAGCCAGAAAGAAGAAAGGCAGAAGGAAAAAAAAAAAAAAAAAG ...xx..............x........:...:......:.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 72575021 NA +3127 chr4 + 190214555 161992844 161992843 161992934 91 TCTCAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATGTGTGTGTATATATATATATATATATAT-GTGTGTATA chr4 - 94230402 37363021 37363020 37363112 56867291 56867290 56867382 92 TCTGAAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATA ...x......xx:x..x.x.:.:..:...:x.:......:..::.:.x......xx....:...:.:...:...x:.:.:.:-:.:...... 82M1I9M 60/91 65.9% 92/94230402 0.0% 1/91 1.1% 124629823 65584732 +3085 chr4 + 190214555 162000598 162000597 162000665 68 AAAAAAAAAAAAACAAAAACAACAACAACAACAAAATATATATACAAAATGA------TAAAACTAAGGTTAAA chr4 - 94230402 65284688 65284687 65284761 28945642 28945641 28945715 74 AGAAAAAAACAAACAAACAAAACAACAACAACAACAAACACACACAAAAAAAGGCAATGAAACCTAAAGTGAAA .:.......x.......x.x..............x.x.:.:.:......x:.------x...x....:..x... 52M6I16M 53/68 77.9% 74/94230402 0.0% 6/68 8.8% 96715910 93498645 +3523 chr4 + 190214555 162026383 162026382 162026465 83 CTGCAACCTACTTCTCCTGGGTTCAAGCGATTCTACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:.xxx..:...........:.x...xxxx.x........::::...........:....x...--......:::. 71M2D10M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 143829257 46385298 +3513 chr4 + 190214555 162033874 162033873 162033946 73 CTGCAGCCTCAACCTCGCAGACTCAAGTGATCCTCCCACCTCAGCCTCTCAAGTAGCTGGAACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:x..x..:x::.::.......x.:.x.xx:x........:...................x.::.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 143836748 46377807 +3128 chr4 + 190214555 162066342 162066341 162066408 67 TTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCATTTTCCTTTTTTTTTTCA chr4 - 94230402 47089616 47089615 47089682 47140721 47140720 47140787 67 TTCTTCACCCCATTCCTCATCTTCTTCCTCCCCACCTTCTTCTTCGTCGCTTTCACTGTTGCTTTCA ......x:.::x.:.:..x........:..:..x:..........x..::....x:.x..x:..... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 114976726 75237829 +3385 chr4 + 190214555 162146648 162146647 162146737 90 TTTTTTACCTAATGTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCCTTCCCCTTCCTTCCCTCCTT chr4 - 94230402 20485597 20485596 20485686 73744717 73744716 73744806 90 TTTTCTGAAAAATATGACTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT ....:.:xxx...:.xx...x.:....x::..:x:...x:...::.....::.::.::...:.:........:.....:...::::.:.. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 141661051 48553504 +3050 chr4 + 190214555 162146669 162146668 162146767 99 CCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCCTTCCCCTTCCTTCCCTCCTTTCTTTCTTTCTCCTTTCTCTCTCTCTCTCT chr4 - 94230402 46931321 46931320 46931419 47298984 47298983 47299082 99 CTTTTCCTTCTGTTCCCTTTCCTTCCACTCCCCACTACATTCCATTTGCATCTCCGTCCTCTCCTACCCAAATGCATCACTCTTTCTCCGTCTCTCCCT .:..:.....:x.......:......x:....:x.:x:x::..x.::x.x..:..x....::...x.::xxx.x.x.:x::.......:x......:.. 99M 60/99 60.6% 99/94230402 0.0% 0/99 0.0% 115215348 74999207 +3533 chr4 + 190214555 162146857 162146856 162146930 74 CTGCAACCTCCATCTCCCAGGTTTGAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::....::....x...x.xx.x........::.........:.:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 143949731 46264824 +3011 chr4 + 190214555 162153723 162153722 162153790 68 TATATGTATATATGTATATAATAATATACATGTATATATACATGTATATTATATGTATACATATATAT chr4 - 94230402 50941868 50941867 50941935 43288468 43288467 43288535 68 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTAT ..x..x.x.....:.::.:..xx.:...:...:..x.............xx.x..x.......::... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 111211855 79002700 +3038 chr4 + 190214555 162202537 162202536 162202580 44 TAAGAAATCTTTTTTTTTCCTTTTTTCTGTTTTTTTTCTTTGTT chr4 - 94230402 61429761 61429760 61429804 32800599 32800598 32800642 44 TAAGAGAGCTTTTTTCTTTCTTTTTTCTTTTTTTCTCCTTTGTT .....:.x.......:..:.........x.....:.:....... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 100772776 89441779 +3011 chr4 + 190214555 162213965 162213964 162214039 75 TTTCTTTCTTTTATTTCTTTCTTTCTTTCTTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCCCTAAAATG chr4 - 94230402 61029227 61029226 61029301 33201102 33201101 33201176 75 TTCCTTGCAAATACTCCTTTACTTATTTCTTCTAGCTTACTTATTTCTTTTTTTTTTTTTTTTTTCCCTCAAATG ..:...x.xxx..:.:....x:..x......::xx:..x:..x:..:.:....:....:..........x..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 101184738 89029817 +3065 chr4 + 190214555 162266724 162266723 162266796 73 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACACACACATATACACATATATATACAC chr4 - 94230402 80495418 80495417 80495490 13734913 13734912 13734985 73 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGC ..:..:.x...:......x.:.......:.:.x.:.x....::........x..xxx::...x.:.:.:..:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 81771306 NA +3086 chr4 + 190214555 162266761 162266760 162266821 61 ATATATACACACACACATATACACATATATATACACATATATATGTATATATATACACACA chr4 - 94230402 38535895 38535894 38535955 55694448 55694447 55694508 61 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA ............::....:x:x.:.:.:...:......:.:.......::...:.x:x... 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 123730866 66483689 +3004 chr4 + 190214555 162266769 162266768 162266829 61 ACACACACATATACACATATATATACACATATATATGTATATATATACACACACATATATA chr4 - 94230402 17520749 17520748 17520809 76709594 76709593 76709654 61 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATA ...x.:.:...x.....x...:.:.:....:.:x...:x.:....x.....::........ 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 144746020 45468535 +3209 chr4 + 190214555 162276330 162276329 162276423 94 GTACATACATACATGCATATATACATTTGTATTTGGGTCCGATGTGAGTGTGTGTGTGTATATATATATATATATATATATGTGTATATATATG chr4 - 94230402 87985347 87985346 87985440 6244963 6244962 6245056 94 GTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATG ..:::..:...:..x:...:.:..x:..::.:xx.Xx..:xxx.::...:x.x::............x.:...........::..:.x..:... 94M 58/93 62.4% 94/94230402 0.0% 0/94 0.0% 74290983 NA +3200 chr4 + 190214555 162292879 162292878 162292930 52 TATGTATATGTATAGAGACATATATACACATACATATGTATATACACATGTA chr4 - 94230402 49414752 49414751 49414803 44815600 44815599 44815651 52 TGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA .:...:.....:....x.x.....:......x.........::.....::.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 112878127 77336428 +3008 chr4 + 190214555 162292897 162292896 162292965 69 CATATATACACATACATATGTATATACACATGTATACACACAAGTGTATTTATACACATGTGTATACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ....:.x.::......x.............:.:..::.:....:::...x:x...:..:.:::::x... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 154696485 35518070 +3112 chr4 + 190214555 162293069 162293068 162293136 68 TACATATATACACATATACATATATATGTGTATATATGTGTATATATGTATATACACACATGTGTGTA chr4 - 94230402 37363048 37363047 37363112 56867291 56867290 56867355 65 TACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATA ...x.:....:....::...x......xx..:...........:...x:.:.:...---..:...:.. 56M3D9M 49/65 75.4% 65/94230402 0.0% 3/65 4.6% 124930021 65284534 +3048 chr4 + 190214555 162293267 162293266 162293341 75 CATATGCGTATATGTATATACACATATGTGTGCATATGCATATATGTATATGTGTATGTATGTAAATATGCATAT chr4 - 94230402 71630131 71630130 71630205 22600198 22600197 22600272 75 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:x.:...::...:.........:.::x:.::.:..::x.x.:.:.::......x..:....:......::.:. 75M 47/75 62.7% 75/94230402 0.0% 0/75 0.0% 90663136 NA +3173 chr4 + 190214555 162293298 162293297 162293385 88 GCATATGCATATATGTATATGTGTATGTATGTAAATATGCATATGTGTATATGTGTACATACATATACACACATATATGTATATGTGT chr4 - 94230402 27943541 27943540 27943628 66286775 66286774 66286862 88 GCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .....::.xx:.:.::.:...:::.x..:..:.:.......:....:.:.::x::..:..x..x..::x......:..x:.:.:.... 88M 53/88 60.2% 88/94230402 0.0% 0/88 0.0% 134349757 55864798 +3110 chr4 + 190214555 162293337 162293336 162293420 84 CATATGTGTATATGTGTACATACATATACACACATATATGTATATGTGTATATATGTGTACATGCATATACACATATATGTATA chr4 - 94230402 8395787 8395786 8395870 85834533 85834532 85834616 84 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.......:....:.:.x....:..:x:......:.:.::x.:::.xx...:::::...::..:.:.x...:.x...x... 84M 52/84 61.9% 84/94230402 0.0% 0/84 0.0% 153897550 36317005 +3468 chr4 + 190214555 162309917 162309916 162310057 141 TTGCTTACAAAAAAAAAAAAAAAAAGGAAGTGGAATTAAAGCAAGTCTGTCTTGACCTGAGATCTTAGTGAGAAAAAAAAAAAAAGTCTT------AGTAAGAATTCAAAATCACAGAGTCTATCATCAAATGGGTTTTGGATTACA chr4 - 94230402 86615219 86615218 86615358 7615045 7615044 7615184 140 TTGTTCTCAGGAAAAAAAAAAAAAAGGGAATGAGGTCTAAGTTTTGCTTTCTTGTTTAGCTTGCTTAGGAGGAAAAAAAAAAAAAGTTTTCACTCCAACAAGGAATAAAGATGGCA-----TATAAT--AATGTGGTTTGACCCACA ...:.:x..::................:.:..:::.:x...:xxxx..x.....x::x.xxxx.....x::................:..------.::...:.x.x..:..x:..-----...x..--....x.x....:x::... 90M6I20M5D6M2D18M 89/134 66.4% 140/94230402 0.0% 13/134 9.7% 75694698 NA +3193 chr4 + 190214555 162312086 162312085 162312202 117 AACAAACAAACAAACAAACAAACAAAAAGATAAAAAGAAAACAGATTTAGCTGGGGAACAAACAAAATCCAAAAATGAGCATGAATTGATAACATTAG-----GCAAAAATAGATTTAAAGA chr4 - 94230402 58286145 58286144 58286261 35944142 35944141 35944258 117 AAGAAACAAACAAACAAACAAAAAGCTAGATAGGTTAAAAGTGGAAATGGTTGGGGAAAAAAAAAACAACAAAA-----CACAAGTTGAAAAACTCAGTATTAGAAGCAGTGAATTTATAGA ..x...................x.:xx.....::xx:...:::..xx.:.:.......x...x...xxx.....-----..::.:....x..xx.:..-----.x.:x.:.::.....x... 74M5D19M5I19M 76/112 67.9% 117/94230402 0.0% 10/112 8.9% 104025941 86188614 +3314 chr4 + 190214555 162324408 162324407 162324479 72 TATATGTATATATGTGTATATATGTGTATATATATGTGTATATATGTATATATGTATATATATGTGTATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:...x.....x.:...:..:.:......:...:.:::...:xx:....x.:x.....:.:...x...... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 109843172 80371383 +3026 chr4 + 190214555 162324474 162324473 162324520 47 TATATATGAATATATATGTGTATATATATGTGTATATATATATATAT chr4 - 94230402 68967416 68967415 68967462 25262941 25262940 25262987 47 TATTTCTGACTATATATGTGTAAGTATATGTGTAAATATACATATAT ...x.x...x............x:..........x.....:...... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 93357058 NA +3045 chr4 + 190214555 162326084 162326083 162326152 69 TTTCTATTAATGTTGGACTTTTTTTGGTTTTTAGATTTTGATTTCTGTTTCTTTGGTTTCAGTTTTTTT chr4 - 94230402 11948186 11948185 11948254 82282149 82282148 82282217 69 TTCCTGTTAAGGCTTTTTTTTTTTTTTCCCTTAGATTTTATTTTCTATTTCTTTGGAACCATTTTTTTT ..:..:....x.:.xxx:.......xx:::.........:x.....:.........xx:..x....... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 150377898 39836657 +3322 chr4 + 190214555 162351916 162351915 162351986 71 TGGCATATATATATATATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATA chr4 - 94230402 71926802 71926801 71926872 22303531 22303530 22303601 71 TAGCAACTATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATA .:...xx.........x....:...:...:.x....x.:......x...x..xx..:....x.::..:... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 90425114 NA +3116 chr4 + 190214555 162351926 162351925 162352008 83 ATATATATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATATACACACATATATATATACACA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:.:.....::...x.:......x..:....:..:::x..:..xx.:.:.:.:.:.:.......x.:.:.x..:x.:. 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 153956138 36258417 +3173 chr4 + 190214555 162351929 162351928 162352049 121 TATATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATATACACACATATATATATACACACATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417317 4417316 4417434 89812969 89812968 89813086 118 TACATGCCTGTTCATAAAAACTTG---AGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..:...:x...x:...x.x.:x.:---.x..x..x.........:.:...:.:.:.x:x...:..::..:x:x:.x::.....:...xx.x::..x..x.....:.:....x...x..... 24M3D94M 74/118 62.7% 118/94230402 0.0% 3/118 2.5% 157934612 32279943 +3214 chr4 + 190214555 162351932 162351931 162352000 69 ATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATATACACACATATATA chr4 - 94230402 24136193 24136192 24136261 70094142 70094141 70094210 69 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA .....::.......x....x.xx.:.x............:...:.x.:.x.:.x.:.....:..x..:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 138215739 51998816 +3500 chr4 + 190214555 162351932 162351931 162352014 83 ATGTGTGTATATATATATGTATATATATATATACATATATATATACATATATATATACACACATATATATATACACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..........:.:.::..:x.:..:...x..:.:..:...::x.....xx...:.:.......:.:.:.x.:...x.::x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 153956144 36258411 +3531 chr4 + 190214555 162376375 162376374 162376604 230 TGTAGAAAGATATACTTTG-----TAAGCAAATAAAATATTTCTTCCTTTCAATTCGTAGAATATTTTCTTCCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTC---------------------TTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTC--CTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCCTTTCTTCCTTTCTTTCTTTCT chr4 - 94230402 76984103 76984102 76984346 17246057 17246056 17246300 244 TATGGAAAGACATTTTTTAATTCTTAAACAAACAAAAA------------CAAACAAAAGAACCCTGTCTCCCCCGCCAACATCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCCTTCCCTCCAGCTTCCGCCCTGGCTCGTGTTTTATCTCCTAACATCT--CTCACTTTCTTTCTCTTCTGCTGTTACTTCATTCT .:.:......:..x:...:-----...:....:....x------------...x:x:x....:x:.x...:..::x.:xx.x.::.:.:x:...x........::---------------------.:....:..x:.x....x:.......:..::.xx.xx:.:..:.:...::.::..:.--...:.x:...xx..:x:x....x.:..:.xx:x...--..:x.........::....x.:x..x:...x.... 19M5I14M12D55M21I57M2I36M2D35M 132/216 61.1% 244/94230402 0.0% 42/216 19.4% 85392272 NA +3280 chr4 + 190214555 162376435 162376434 162376524 90 TTTCTTCCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTC chr4 - 94230402 35294596 35294595 35294683 58935720 58935719 58935807 88 TTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCT--CTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC ...:.:....x.x..x......:...:...x.......x:....:...:.--:...x..:..:...xx::x..x.:..::.:..x...:. 50M2D38M 60/88 68.2% 88/94230402 0.0% 2/88 2.3% 127081839 63132716 +3064 chr4 + 190214555 162376447 162376446 162376516 70 TTTCTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .:.....:.:x.....::x...:...:.x...::.....:::::.x......:..:..x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 116778734 73435821 +3064 chr4 + 190214555 162376451 162376450 162376520 70 TTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTT chr4 - 94230402 45597713 45597712 45597782 48632621 48632620 48632690 70 TCTCTTTTTCGTTCTTCCACTTCCTTCCATTCCCTCTTTTCCCTTATCTTTCCTTTCTGCTTTCTGTATT .:........x..:.:::x...:...:.x...::.....:::::.x.........::.x......x.x.. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 116778738 73435817 +3255 chr4 + 190214555 162376464 162376463 162376558 95 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTC chr4 - 94230402 35294589 35294588 35294682 58935721 58935720 58935814 94 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGT-TTTCTTCTCATTCC ..:::.....:.::...x.x..x......::.:::..x.:.....x:....:...:.::..x..:......xx.:x..x.-......:.:x..:. 80M1D14M 61/94 64.9% 94/94230402 0.0% 1/94 1.1% 127081875 63132680 +3069 chr4 + 190214555 162376496 162376495 162376575 80 TTCTTTCCTTCTTTCTTTCTTTCTTTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTTTCTTTCTTCCTTTCTTCCTTTCT chr4 - 94230402 18988817 18988816 18988896 75241507 75241506 75241586 80 TCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCT .:.:..x:x.:..x......:.xx.:..x...:..:............:.:.:.:.x...x.xx.:.:.x:.....x... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 143387679 46826876 +3020 chr4 + 190214555 162380742 162380741 162380793 52 AGGAAAAGAATGAGCTCCTCTAACTTGCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 48303457 48303456 48303508 45926895 45926894 45926946 52 AAAAAAAGAAAGAGCTCTTCTGGAGTGCATTTTTTATCTTTTTTTTTTTTTT .::.......x......:...::xx...x......x.:.............. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 114077285 76137270 +3112 chr4 + 190214555 162390974 162390973 162391046 73 TCAACAAAGAAAGAAGCAAATAAAGGAAGGGAGAAAAGAGAAAATAAAAAAAGAAAGAAAAAAAGAAAGAAAG chr4 - 94230402 29290771 29290770 29290843 64939560 64939559 64939632 73 TCAGTACAGGGAATGACAAGTAAAGAATGGGGGGAAAGAAAAAAAAAAAAAAGCAAGAAGTAAACTGGGAGAG ...::.x..::.:x::...:.....:.x...:.:.....:....x........x.....:x...xx::..:.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 133100203 57114352 +3180 chr4 + 190214555 162391008 162391007 162391089 82 AAAGAGAAAATAAAAAAAGAAAGAAAAAAAGAAAGAAAGGGAAAATGAAGGAAGGAA-----GAAGAGGGAAAGAGAGGAAAGGAAA chr4 - 94230402 7739259 7739258 7739345 86491058 86491057 86491144 87 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA .:..:.....xx.:.:::.:::.::.....:........:.......x....:..:.-----...:.:::...:.:.::..xx.... 57M5I25M 54/82 65.9% 87/94230402 0.0% 5/82 6.1% 154651749 35562806 +3020 chr4 + 190214555 162410122 162410121 162410181 60 TTATTTCAGTATTGGCTCTCTGGCTCTCTGTTTCTCTCTCTCTCTCTATATATATATATA chr4 - 94230402 9598892 9598891 9598951 84631452 84631451 84631511 60 TTCTTCCTGTTTTGTCTGACATAGTCACTGTATCTCTCTCTCTCTCTATATATATATATA ..x..:.x..x...x..xx.xx:x..x....x............................ 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 152811230 37403325 +3288 chr4 + 190214555 162410162 162410161 162410228 67 TCTCTCTATATATATATATATGTACACACACACACACACACACACACACATACATATATACACACAT chr4 - 94230402 4481687 4481686 4481753 89748650 89748649 89748716 67 TCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ...::x....x:.:.:.:.....:....x...:.....:x....:..x.xx........::...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 157928475 32286080 +3078 chr4 + 190214555 162410192 162410191 162410240 49 CACACACACACACACACACATACATATATACACACATACACATATATTT chr4 - 94230402 87372747 87372746 87372795 6857608 6857607 6857656 49 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTT ..x...........x.....:....x.....::.::...::........ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 75037445 NA +3122 chr4 + 190214555 162410207 162410206 162410292 86 ACACATACATATATACACACATACACATATATTTATATTTACAAGGGATGTAAATATATATGTGTGCATATATATACATAAATACA chr4 - 94230402 87985353 87985352 87985438 6244965 6244964 6245050 86 ATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACA .:.:...:x....:....x.x......x:Xx.:.x:.x:x.xx.....:..:x........x...::..........:.:xx.... 86M 57/85 67.1% 86/94230402 0.0% 0/86 0.0% 74424854 NA +3577 chr4 + 190214555 162424088 162424087 162424202 115 ATATATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTAT--ATATGTGTATATATACACACACGTATATATGTGTATATATACACACACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTT----GCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x..x.....................x:x..:..:::...x.x:.x.----:....:....--.x:::.x..x.........:.:x...x...:..:-:.:.x....xx....... 48M4D10M2I34M1D18M 78/110 70.9% 112/94230402 0.0% 7/110 6.4% 158006745 32207810 +3442 chr4 + 190214555 162424090 162424089 162424177 88 ATATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACGTATAT chr4 - 94230402 61485373 61485372 61485453 32744950 32744949 32745030 81 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT-------TCTGTAGATGTATAGATAGATAGGTGTACAT .........:.........::.....x:::..:...:.:.....x....:-------.x.:..x:......x...x.:.x::...:.. 50M7D31M 58/81 71.6% 81/94230402 0.0% 7/81 8.6% 100938717 89275838 +3786 chr4 + 190214555 162424091 162424090 162424219 129 TATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACATATATATGTATATATACACAT chr4 - 94230402 21704674 21704673 21704788 72525615 72525614 72525729 115 TATATATATGTACACACACACACACACACGTGTATA-----AAATGTA---------ATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT ....:....:.....................:....-----.x..:..---------...x.....x..:xx.:xxxx..x.x.xx.x.:.::..:x...:.x.x.:..............:..::x.. 36M5D7M9D72M 82/115 71.3% 115/94230402 0.0% 14/115 12.2% 140719417 49495138 +3786 chr4 + 190214555 162424091 162424090 162424219 129 TATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACGTATATATGTGTATATATACACACACATATATATGTATATATACACAT chr4 - 94230402 21701101 21701100 21701215 72529188 72529187 72529302 115 TATATATATGTACACACACACACACACACGTGTATA-----AAATGTA---------ATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT ....:....:.....................:....-----.x..:..---------...x.....x..:xx.:xxxx..x.x.xx.x.:.::..:x...:.x.x.:..............:..::x.. 36M5D7M9D72M 82/115 71.3% 115/94230402 0.0% 14/115 12.2% 140722990 49491565 +3111 chr4 + 190214555 162424092 162424091 162424153 62 ATACATATATACACACACACACACACACGTATATATGTGTATATATACACACACGTATATAT chr4 - 94230402 17520749 17520748 17520810 76709593 76709592 76709654 62 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .:.x.......x.....x.:.....:..:.:.:x...:x.:....x.....::.:....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 144903343 45311212 +3011 chr4 + 190214555 162424175 162424174 162424225 51 TATATGTGTATATATACACACACATATATATGTATATATACACATATATAT chr4 - 94230402 50941868 50941867 50941918 43288485 43288484 43288535 51 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATAT ..x..x.x.......:....x...:.......:..x......::....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 111482307 78732248 +3471 chr4 + 190214555 162425559 162425558 162425632 74 GTTCTGCGATC---ACCTCCCAGGCTCAAGTGATCCACCCATCTCAGCCTCCCAAGTAGCTGGACCTGCAAGTGCAC chr4 - 94230402 18197123 18197122 18197199 76033204 76033203 76033280 77 GTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .....:.:::.---.x..:.::..:.......x.:...xx:x........::............x..:..x...... 11M3I63M 54/74 73.0% 77/94230402 0.0% 3/74 4.1% 144228436 45986119 +3403 chr4 + 190214555 162483743 162483742 162483833 91 AAAAAAAGAAAGAAAAAGAGAGAGAGAGAGGAAGACTTATATTAAGCCAAAAAAAAAAAAAAAAAAAAAAAAACTAAGAAAAATCCAAGTC chr4 - 94230402 29321529 29321528 29321619 64908784 64908783 64908874 91 AAAACAGAAGGGAATTAAGGAGAAAGAGCAAATAATTTAAAACAAAACAAACAAAAAAAAAAAACAAAAAACACTGAGATACATCTTATTC ....x.::.::...xx.::....:....x::.x:.:...x.x:..:x....x............x......x...:...x.x...:x.x.. 91M 61/91 67.0% 91/94230402 0.0% 0/91 0.0% 133162214 57052341 +3607 chr4 + 190214555 162498101 162498100 162498167 67 GTCATGAACACAAAGA------CATATGTATACATATATGTATACACACACACACACACACACACACACACAC chr4 - 94230402 14964812 14964811 14964884 79265519 79265518 79265591 73 GTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..::..:.......x.------.:.:..:.:..:.:........:...xx........::............. 16M6I51M 52/67 77.6% 73/94230402 0.0% 6/67 9.0% 147533289 42681266 +3251 chr4 + 190214555 162498104 162498103 162498187 84 ATGAACACAAAGACATATGTATACATATATGTATACACACACACACACACACACACACACACACACACACACACACAGAGCTTA chr4 - 94230402 8395796 8395795 8395879 85834524 85834523 85834607 84 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCA ...x:::..x.:....:.:.x.......:.:.::x:...:xx.:.................x.....x.::x.:.x.:.:.::. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 154102308 36112247 +3255 chr4 + 190214555 162498105 162498104 162498168 64 TGAACACAAAGACATATGTATACATATATGTATACACACACACACACACACACACACACACACA chr4 - 94230402 8395799 8395798 8395862 85834541 85834540 85834604 64 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x:..:...x.::...x..:.:..:....:x....:xx.:.................x..... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 154102306 36112249 +3128 chr4 + 190214555 162498116 162498115 162498160 45 ACATATGTATACATATATGTATACACACACACACACACACACACA chr4 - 94230402 8395818 8395817 8395862 85834541 85834540 85834585 45 ACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..........:.x..:..xx...................x..... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 154102298 36112257 +3308 chr4 + 190214555 162498116 162498115 162498180 65 ACATATGTATACATATATGTATACACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 7596415 7596414 7596479 86633924 86633923 86633988 65 ACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ...x...:.....x..:.:.........:..:::.:...x...:.:..x:..:...:...:.x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 154901701 35312854 +3235 chr4 + 190214555 162498118 162498117 162498182 65 ATATGTATACATATATGTATACACACACACACACACACACACACACACACACACACACACACAGA chr4 - 94230402 8395808 8395807 8395872 85834531 85834530 85834595 65 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA .:......x:.:........:.x:...:xx.:.................x.....x.::x.:.:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 154102310 36112245 +3197 chr4 + 190214555 162498120 162498119 162498182 63 ATGTATACATATATGTATACACACACACACACACACACACACACACACACACACACACACAGA chr4 - 94230402 89016082 89016081 89016144 5214259 5214258 5214321 63 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGA ....::...:..x..:..:.........::x::.:........::..x.::..:....::... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 73482038 NA +3278 chr4 + 190214555 162501871 162501870 162501935 65 ACTCTCATCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTATGTGCATGTG chr4 - 94230402 70982618 70982617 70982682 23247721 23247720 23247785 65 ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ...:.:x..x............:.......:::.:...x::..x:........:..:::..::.. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 91519253 NA +3079 chr4 + 190214555 162501896 162501895 162501948 53 TGTGTGTGTGTGTGTGTATGTGTGTGTGTATGTGCATGTGTGTTTGTGTGCTT chr4 - 94230402 81428433 81428432 81428485 12801918 12801917 12801970 53 TGTGTGTGTGTGTGTGTATGGTCATGTATACGTACAATTGTGTTTGGATGTTT ....................xx::...:..:..:..xx........x:..:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 81073463 NA +3293 chr4 + 190214555 162507468 162507467 162507517 50 AAGTCTGTCTCAAAAAACAAACAAACAACCAAGCAACAACAACAAAAAAA chr4 - 94230402 50270373 50270372 50270422 43959981 43959980 43960030 50 AAGTTTATCTCAAGAAACAAAAAGCCCATCAAACAACAACAACAAAAAAA ....:.:......:.......x.:x.x.:...:................. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 112237095 77977460 +3064 chr4 + 190214555 162516055 162516054 162516102 48 CTACTGGAAAAAAAAAAAAAAAAAAAAAACAGAAGGTAAGTGGGTTTT chr4 - 94230402 68147725 68147724 68147772 26082631 26082630 26082678 48 CTACTGAAAAAAAAGAAGAAAAAAAAAAAGCTAAAATAAATGGGTTTT ......:.......:..:...........xxx..::...:........ 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 94368330 NA +3053 chr4 + 190214555 162531462 162531461 162531500 39 AAAAACAAAAAACAAAAACATAAACAAACAAACAAAAAA chr4 - 94230402 4159750 4159749 4159788 90070615 90070614 90070653 39 AAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAA .............x......x...:.............. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 158371712 31842843 +3231 chr4 + 190214555 162543089 162543088 162543178 90 AGATACATATATATGTATGTATGTGTGTGTATATATATGTGTGTGTATATATAT--GTGT-----AATATATAA----------GAAGTAACCATAAAGTTTATACA chr4 - 94230402 19704278 19704277 19704384 74526019 74526018 74526125 107 AAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCAATCTACAATATTTTCAGGAAAGTGTCCTCTAGGTTTATACA .:...........:....:...x.....:.:.x:..:.........:.:x..x.--....-----...x..:..----------:....:x..x:x.:......... 54M2I4M5I9M10I23M 68/90 75.6% 107/94230402 0.0% 17/90 18.9% 142838811 47375744 +3128 chr4 + 190214555 162547918 162547917 162547970 53 AACTAAATGCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 71805979 71805978 71806031 22424372 22424371 22424424 53 AATTAAATACCTGCTTTTTTTTTTTTTTTCCCCTTTATTTTTTTTTCCAGAAA ..:.....:...x................::::...x.........::x..:. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 90741939 NA +3474 chr4 + 190214555 162549653 162549652 162549728 76 TCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATACACACACACACAGGA-TATGGATATACATACACAC chr4 - 94230402 80495418 80495417 80495494 13734909 13734908 13734985 77 TCCCTTTGTCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCAC ..:..:.x...:......x.:.......:.:.x.:.x....:.........x...x.-..::..:.:...::.x... 57M1I19M 55/76 72.4% 77/94230402 0.0% 1/76 1.3% 82054235 NA +3988 chr4 + 190214555 162549714 162549713 162549811 98 GATATACATACACACATATATAGAGATAATATAATATGTATATACA--TATATATATATCTATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 33398775 33398774 33398873 60831530 60831529 60831628 99 GAGAAATATACACACATGCGCACAGACCATATAA-ATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA ..x.x.:..........::::.x...:x......-......x..x.--.:.:::.:.:.x....:.:.......:.x.............x.....x.:. 34M1D11M2I52M 71/97 73.2% 99/94230402 0.0% 3/97 3.1% 129150939 61063616 +3171 chr4 + 190214555 162564888 162564887 162564983 96 AGGGAGAAGGAAGGAAGGAAGGAAGGAATGAAAGAAGAAAGGAAGGAAGGAAAAGAAACAAATAAAGCCACTCTTTTCCCTACGAATATTAAGAAG chr4 - 94230402 44400496 44400495 44400591 49829812 49829811 49829907 96 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAG ......::..::...::.......:...x:...:.......:..x.::x:....x..:.x.xx:..:x::xxx..:..x...x:..x....:::.. 96M 59/96 61.5% 96/94230402 0.0% 0/96 0.0% 118164392 72050163 +3223 chr4 + 190214555 162567333 162567332 162567398 66 TGATTCTTTTAAGTGTGTGTGTGTGTATATGTATATATACACATATGTATATGTGTATATATACAT chr4 - 94230402 70982616 70982615 70982681 23247722 23247721 23247787 66 TAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .:.:.:....xxx...........:.:.:....:....::x....x:.:.:....:...:.:.... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 91584717 NA +3318 chr4 + 190214555 162567335 162567334 162567445 111 ATTCTTTTAAGTGTGTGTGTGTGTATATGTATATATACACA-------TATGTATAT-------GTGTATATATACATATACACA---CAATTCCACCAT-CTTATCCCTCTGTCCACATTTTAAAAGG chr4 - 94230402 19559287 19559286 19559415 74670988 74670987 74671116 129 ATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTtgtggtgggttcacactggtggacaactaaactctaccacactgctctctcacttcccattctcaaagg ...:....xx..................:........:...-------.x.......-------...x:.x:.:..xx:.:x...---x..:..:....:-..xx..:...xx.:.x....:.x..... 41M7I9M7I21M3I12M1I28M 82/111 73.9% 129/94230402 0.0% 18/111 16.2% 143008048 47206507 +3801 chr4 + 190214555 162570851 162570850 162570990 140 CCTTGGGCAAATTACTTAACCTCTCTGTGCTTCAGTTTTCTCATCTGTAAATAAAAATAAAAAGAATAACTCCTTCATAGTATTGAGATCAAGATTAAATGAATTAATAATAATATAGCACATGGTAAGTTTTATATACA chr4 - 94230402 25916960 25916959 25917093 68313310 68313309 68313443 134 CCTGGGGAAAATCAGTTATTCTCTCTGTACCTCAGTTTTGCTCTCTAAAATGAAGAATAAAATACACAGTTTTCTTACAGTACTGATGACAGCATT--ATGCATTGGAGAT----TATCAGACATTAAATATTATATCCA ...x...x....:.x...x:........:.:........x::x...:x..xx..:.......x:x.:.::.:::.:.:....:...x:x..:x...--...x...::x:..----..x..x.::x...:.x......x.. 96M2D13M4D25M 87/134 64.9% 134/94230402 0.0% 6/134 4.5% 136653891 53560664 +3031 chr4 + 190214555 162593853 162593852 162594024 172 AGAAAAATAAAAATTTAATATACTACAATTAAAAGGAAAAGAATCTAGAGTAGATTAAGCAGAATTTACATTTTCAATAAGCAATCATTTAAAACAAGCATATTTAATATCTGCAAAAATATAAGGGAAGATGAAGAAAGCACAAGAAGTCATAAAATATAAATGAGGTATA chr4 - 94230402 19559447 19559446 19559582 74670821 74670820 74670956 136 AAAAAAAAAAAAGTTAAGGATACTCTAATTAAAAGGAAAAGAATACAAAATAAA------------------TACTATAAGAAAAC---CAAAACCAAAA-------------CAAAACAAAAAGCAAAGACGGTGCAGAATCAAGGAG--ATAAAATATAGCTCAATTATA .:.....x....:..x.:x.....x:..................x:.:.:..:.------------------.x.x.....x..x.---:.....x.:x.-------------.....xx.x...x:....:.:x.x.::xx....:..--..........:x.x.:x.... 54M18D14M3D11M13D36M2D21M 96/136 70.6% 136/94230402 0.0% 36/136 26.5% 143034406 47180149 +3113 chr4 + 190214555 162620056 162620055 162620135 80 TTTTCTTAATTTTCTTGTCATATTTGTATAAGGATGAAACTTTGGAAAATAACATTTAACCATGTAAATATGTTAAATAA chr4 - 94230402 22558590 22558589 22558669 71671734 71671733 71671813 80 TTTTCAGAAGTTTCTTGTCTCAGTGGAAAACAAATGCACCTCTGGAAAACATTATTTATTCATGTGCATATATTAAGTGA .....xx..x.........x:.x.x.x.x.x::...x.x..:.......:.x:.....x:.....:x....:....:.:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 140061466 50153089 +3014 chr4 + 190214555 162631983 162631982 162632044 62 TAGCCAGACTAAGAAAGAAAAAAAAAAGAGAAGACCCAAATAAATAAAATCAGAAATAAAAA chr4 - 94230402 76677496 76677495 76677557 17552846 17552845 17552907 62 TAACAGGTCTGAGATAGGCCAAAAAAAGAGAAGAGCCAAACAAAAAAAATGAGAATTATAAA ..:.x:.x..:...x..:xx..............x.....:...x.....x....x..x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 85954487 NA +3157 chr4 + 190214555 162634494 162634493 162634558 65 AGCTTTTATCAAAAAAAAAAAAAAAACAGATAATAACAAATGCTAATGAGGATGTGGAGAAAAGA chr4 - 94230402 78637034 78637033 78637098 15593305 15593304 15593369 65 AGCTCTTCTCAGAAAAAAAAAAACAACAAACAAAAACCAGTTCTAATGAGAAGGTATTTAAAAAA ....:..x...:...........x....:.:..x...x.:.x........:.x..:xxx....:. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 83997460 NA +3158 chr4 + 190214555 162638782 162638781 162638867 86 ATACAAGTTGCTTATAGT-TCTGTATTATTTCCTTTTTTTTTTTTTTTTTTTCTGTGAGACAGAGTCTCGGCTCTGTTTTCCAGGCT chr4 - 94230402 35978780 35978779 35978864 58251539 58251538 58251623 85 ATTCTAGCTACTAACAATCTCTCTATTGT--ACTTTTTTTTTTTTTTTTTTTCAGTTAAAAGAGGTTTCTACTCTGTTTTCTGGATT ..x.x..:.:..x.:.:.-...x....:.--x.....................x..x.:.x:::..:..x:..........::.::. 18M1I10M2D56M 60/84 71.4% 85/94230402 0.0% 3/84 3.6% 126660002 63554553 +3769 chr4 + 190214555 162641801 162641800 162641909 109 AAAGGAAAGAAAGAAAGAAAGAGAGAGAGAGA----AAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAGAAA chr4 - 94230402 30533169 30533168 30533281 63697122 63697121 63697234 113 AAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAA ...:.:..........::.:.:......:...----:.:....x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx.:..:::....:.. 32M4I77M 70/109 64.2% 113/94230402 0.0% 4/109 3.7% 132108632 58105923 +3026 chr4 + 190214555 162641821 162641820 162641874 54 GAGAGAGAGAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237707 9237706 9237760 84992643 84992642 84992696 54 GGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:......:..:x..x::...:.....:....:....:..:...:....::... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 153404114 36810441 +3104 chr4 + 190214555 162641830 162641829 162641913 84 AGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAGAAAATTA chr4 - 94230402 56098461 56098460 56098544 38131859 38131858 38131942 84 AGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTA ..:..x.:....xx.:....x.:...::...:....:..:.:x:.:..:::.:..:....xx.::....xxx..:..:...... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 106543369 83671186 +3385 chr4 + 190214555 162649061 162649060 162649233 173 TGGTGAGAGATGGGGGTTCAATTTTATTCGTGTGTGTATATATATGTGTATATATATACATACATATGTATGTATATATATACACACACACACATGTATGTATATATATACACATACATATGTATGTATATATATACACATACATATGTATGTATATAT-----ATACACATACATAT chr4 - 94230402 4417290 4417289 4417453 89812950 89812949 89813113 164 TGACGAAAAATACTGATTCATTTTTCTT-----------ACATGCCTGTTCATAAAAACTTG---AGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATAT ..::..:.:..:xx.:....x....x..-----------.:..::x...x:...x.x..x.:---.x:.x.:x.:...................x.x.::..:::..:x:x::x.:..:......xx.x::..x..x.:.....:..:.x.:.x.....-----.x....xx...... 28M11D23M3D94M5I14M 101/159 63.5% 164/94230402 0.0% 19/159 11.9% 158231771 31982784 +3286 chr4 + 190214555 162649090 162649089 162649148 59 GTGTGTGTATATATATGTGTATATATATACATACATATGTATGTATATATATACACACA chr4 - 94230402 61435330 61435329 61435388 32795015 32795014 32795073 59 GTGTTTGTATATTTTAGTGTACATAGATACATTCCAATGTATGTATATATATGTACATA ....x.......x.xx.....:...x......x.xx................::...:. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 101213760 89000795 +3537 chr4 + 190214555 162649104 162649103 162649262 159 ATGTGTATATATATACATACATATGTATGTATATATATACACACACACACAT-------------GTATGTATATATATACACATACATATGTATGTATATATATACACAT-----ACATATGTATGTATATATATACA-------------------CATACATATGTATGTATATATGTATACACACATATATA chr4 - 94230402 80747809 80747808 80748003 13482400 13482399 13482594 195 ATGTGTATAGCTATGCATACATACGCAACTATACATACATACACACACATAGCATTCCCAATCCATCACGTATATGTGTACCAATGTAAAGAGCTGTGTGTAGATACGTATGTAAAAGATACGTAGGATGAGATCTCTATGAGACAAAAACCTAACTCTATCCATGTGTAT-TATCTATGTATACCTATGTACGTA .........xx...:........:.:.xx....:...:.:.........:.x-------------x:.:......:.:...xx..::.x.x:xx...:.:..x....::..-----.x...:...x.xxx.x..x.x:.-------------------:..x...:.....-...x.........x:.::..::.. 52M13I46M5I23M19I13M1D24M 107/158 67.7% 195/94230402 0.0% 38/158 24.1% 81901295 NA +3303 chr4 + 190214555 162649104 162649103 162649185 82 ATGTGTATATATATACATACATATGTATGTATATATATACACACACACACATGTATGTATATATATACACATACATATGTAT chr4 - 94230402 8395788 8395787 8395869 85834534 85834533 85834615 82 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT ......:...:.:.:....x.:......x..:....:..::.x:...:xx..::.:::.:.:.:.:...x.:...x...x.. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 154253316 35961239 +3000 chr4 + 190214555 162649174 162649173 162649238 65 ATACATATGTATGTATATATATACACATACATATGTATGTATATATATACACATACATATGTATG chr4 - 94230402 48167041 48167040 48167105 46063298 46063297 46063362 65 ATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ...:..xxx:..:...:......x........:x::....::x:...:...::....:....... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 114482133 75732422 +3113 chr4 + 190214555 162649203 162649202 162649283 81 CATATGTATGTATATATATACACATACATATGTATGTATATATGTATACACACATATATA---------TATATGGCTAACCAGTTTTCC chr4 - 94230402 51294135 51294134 51294224 42936179 42936178 42936268 90 CATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATAAAGTGTTTGGCCAGACAGAGTTCC ......::.:.x.:.:.::....x.:............x:........:...:::..x:.---------.:.x....:.:x...xx.... 60M9I21M 56/81 69.1% 90/94230402 0.0% 9/81 11.1% 111355068 78859487 +3133 chr4 + 190214555 162661707 162661706 162661756 50 TTTCAGAAGAGAGACAAAAAACAAAAACAAAAACAAGCAAACAAACAAAC chr4 - 94230402 4159741 4159740 4159790 90070613 90070612 90070662 50 TTCTACAGGAAAAACAAAAAACCAAAACAAAAATAAACAAACAAAAAAAC ..::.x.:..:.:.........x..........:..:........x.... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 158501966 31712589 +3438 chr4 + 190214555 162676738 162676737 162676801 64 ACCAAAAAAAAAAAAAAAAAAAAAAACACACACACACACACAAATACCAAAAAGATCTGGGTGT chr4 - 94230402 52796035 52796034 52796098 41434305 41434304 41434368 64 ACAACAACAAAAAAAGAGAGAAAACACACATACACACACACAAATACCCAGACATTCTGAGAGT ..x.x..x.......:.:.:....x.....:.................x.:.x:x....:.x.. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 109880703 80333852 +3055 chr4 + 190214555 162684365 162684364 162684418 54 AAACAGAAAGAGAGGAGAGGAGAAGTGGGGAGGAGAGGGGAGGGGAAAGAACTG chr4 - 94230402 80093049 80093048 80093102 14137301 14137300 14137354 54 AAACAGAAAAATAGAAGAAAGGAACTGTAGAAGATAGGAGAGGGGAAAGTACTG .........:.x..:...:::...x..x:..:..x...:..........x.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 82591316 NA +3057 chr4 + 190214555 162686691 162686690 162686756 66 GTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGGAAAATAGTTTGAAAATGTATTTTATGA chr4 - 94230402 30090787 30090786 30090852 64139551 64139550 64139616 66 GTGACACTTTCATTAAAAAAAAGAAAGAAAAAAAAAAGGAAAATACATAGAAGCTGCATCATGTAA ....x...:.xx:.x.......:...:..................xx.x...:x..:..:x.:.:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 132595904 57618651 +4336 chr4 + 190214555 162695942 162695941 162696355 414 ATCTATATATATAATCTATATAATATATATTATACATAATATATATTATATATAATATATATTATATATAATCTATATAAATATATTATATATAATATATATTATATATAACCTATG------TAGATTATATATAATATATATAGATTATATATAATATATATAAATATATAA----------ATATTAATATAACATATAAACATATATAGATTATATATTATATAATACATATAGATTATA--------TATAATATATATAAATATAATATATATAAAATATAATATA-TAAATAAATTATATATAATAATTTATATATATAAATAATTATATATAAATATATTA------TATATA--------------TAAATTATA----TATAATTTATATTTATATATTTATTATATTATATTTATATAACATATATAAAATAA--TATATATAATTATATATAA chr4 - 94230402 48211471 48211470 48211900 46018503 46018502 46018932 430 ATCTATACATACGACTAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT--------------CACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT-CAAGGATTA-ACATAAAATGTCTTAAAAAATCACTGATTTTCTATATTCCTACTACATAGATGCATG-------GAAATTTTCTTGAATGCAAAAGGCTTTCACTGAGTGCTATGATTTTTACAGAAGCTTTACAGGGATAAACTTGTACAGCAAAAAAATAATTTCCTATTCTTTATGGA---AAACAATCAGAAATAAACAGTTTAGAACATTACATAATACTGGCCGATACTAAATCATAATCTGATAATTTTTATTC---TATGTGACATATCATA---ATATTACATG---AAAATAAATTATACAAACTTACATTTAA .......:...::.::x.....x.x...:.xx.::...x...x.x........x....::xx...x...x..x...--------------:.:.::.....::.....::.:.....------.:...x....::.:...-:.x:.....-.:....x..:.x.x..x.x..x.----------.....xx..:x.....x.x:...:-------x.x..x..x.xx...:..x.x:.x..x:.--------...:..x.x..:.:.x::xx..:.x:x.x..xx.x:..:.-:...x....x..x.x:x..xx.....:x.---...:...:.x.x.....:.xx...------..:...--------------.....:...----x.......x....:---...x.:x:....:...---....x....:---.......--....:.x.x...:..x... 76M14D27M6I17M1D9M1D23M10I24M7D29M8I40M1I29M3D24M6I6M14I9M4I14M3D16M3D10M3D7M2I19M 254/379 67.0% 430/94230402 0.0% 86/379 22.7% 114484471 75730084 +3076 chr4 + 190214555 162707679 162707678 162707736 58 AAAAACTTTAAAGCCACTGTTATTTGTTTTTTTTTTTTTTTTTTCTGTTTCTTACAGT chr4 - 94230402 28465148 28465147 28465205 65765198 65765197 65765255 58 AAAAGCTTTAAAGCCTCTGTTTTTTTTTTTTTCCTTTTCTACTTCTACCCGCTACAGT ....:..........x.....x...x......::....:.x:....::::x:...... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 134242531 55972024 +3048 chr4 + 190214555 162748871 162748870 162748909 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGATTGT chr4 - 94230402 81629064 81629063 81629102 12601301 12601300 12601339 39 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGCGT ..........:.......x................x:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 81119807 NA +3274 chr4 + 190214555 162748871 162748870 162748917 47 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGATTGTGGTTTTAT chr4 - 94230402 18982315 18982314 18982361 75248042 75248041 75248088 47 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATTTAT ..................x................xx:x..x..... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 143766556 46447999 +3147 chr4 + 190214555 162748873 162748872 162748905 33 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982347 75248056 75248055 75248088 33 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 143766558 46447997 +3167 chr4 + 190214555 162748873 162748872 162748925 53 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGATTGTGGTTTTATAAGTATTT chr4 - 94230402 81629064 81629063 81629114 12601289 12601288 12601339 51 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAGC-GTTTTAC-AGTATTT ..........:......................xx.:-......:-....... 37M1D7M1D7M 46/51 90.2% 51/94230402 0.0% 2/51 3.9% 81119809 NA +3260 chr4 + 190214555 162812231 162812230 162812324 94 GAAAGAGGAAAGAAAGAAAAAAAGAGAAAGAAAGAAAAGAAAGAGAAAGCAAAAAGGAAGAAAGAGA-------AAAAGGTAAAAAAGAGAAAGAGAAAAT chr4 - 94230402 42895011 42895010 42895111 51335292 51335291 51335392 101 GAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAATCATGCCAAGTGACTGAAAAGACATAAGGAGGAT ..............:........:.....:..x:..:...:.:x..:.:.x:x:..:..xx.:..:.-------..:x.::x:......x.x.::..::.. 67M7I27M 62/94 66.0% 101/94230402 0.0% 7/94 7.4% 119917220 70297335 +3187 chr4 + 190214555 162812249 162812248 162812353 105 AAAAAGAGAAAGAAAGAAAAGAAAGAGAAAGCAAAAAGGAAGAAAGAGAAAAAGGTAAAAAAGAGAAAGAGAAAATAAAATAAAAAAGGATTTTAAAAGATTAGC chr4 - 94230402 27809324 27809323 27809428 66420975 66420974 66421079 105 AGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAATTTAGAAATATGCCAGGAACAGCTGAAATTACCAGAATTACTGAAGATCAGC .:....:.:....x:....x:.....::..::.........:.:.::......xx..:...x:x.xx..::.x.::x:..xxx.xx..:...x:x:.....:... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 135002925 55211630 +3204 chr4 + 190214555 162834929 162834928 162834989 61 ATATATACATATACATATATATATATATATAT----ATATATATACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395860 85834543 85834542 85834607 65 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ..:.:.:....x....:...x..:....:...----.:..xx...................x... 32M4I29M 49/61 80.3% 65/94230402 0.0% 4/61 6.6% 154439133 35775422 +3206 chr4 + 190214555 162834931 162834930 162834989 59 ATATACATATACATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x....:..:x..:....:...::x..:..xx...:...............x..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 154439127 35775428 +3235 chr4 + 190214555 162834934 162834933 162834984 51 TACATATACATATATATATATATATATATATATATACACACACACACACAC chr4 - 94230402 88147180 88147179 88147230 6083173 6083172 6083223 51 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC .....:..x:x..............:.x.:.:...:.:............. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 74687754 NA +3250 chr4 + 190214555 162905962 162905961 162906029 68 CTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGGTTACATGCGTTAGCCACTG chr4 - 94230402 18197139 18197138 18197204 76033199 76033198 76033264 66 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTG ..:.:.........:.x...x..x.x........::::.........:::....:.:.:--:...... 59M2D7M 48/66 72.7% 66/94230402 0.0% 2/66 3.0% 144708823 45505732 +3057 chr4 + 190214555 162919178 162919177 162919274 97 ATATATATACATATATATGTGTATATATATCATATATATGTGTATATATATGATATATATACACACACACACACACATACATACATACATACATACA chr4 - 94230402 21129741 21129740 21129837 73100566 73100565 73100662 97 ATCTAAATCCTTTTTTATTTGCACATCCCTAGCTCAAATATCTGTAGTTATAATGTATTTATACACACACACACAGGTGCGCATGTACATAGATACA ..x..x..x.x.x.x...x..:.:..x:x.x::x:.x..:.x.:..xx...:..:...x..:.............x:.:.::.::......x..... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 141789437 48425118 +3245 chr4 + 190214555 162919594 162919593 162919724 131 ATCTCAAAAAAAAAAAAAAAAAAAAATGAAATCATGTTCTTTGCAGCAAAATGGATGGAGCTAGAAACATTATTCTAAGTGAACTAAC-----TCAGAAGCAGAAAATCCAATACAACATGTTTTCACTTGTAAGT chr4 - 94230402 86654536 86654535 86654669 7575734 7575733 7575867 134 ATTTCTAGGAGGAAAAAAAAAAAAAAAGAAAGTCTTTTCTATGTAAACAAATAGCTGTAGATGGCAACATTTAACAAAAGGAAATAACTTCCATTGTAAACAAAACAGTCAAG--TGCACACTTTCTCTTTTAAGT ..:..x.::.::..............x....x:x.x....x..:.:xx....:.x..x..x.:.x......xxx.x..:x...x....-----.::x..:..:..x.x:...x--x:..:::....x...x..... 88M5I20M2D21M 84/129 65.1% 134/94230402 0.0% 7/129 5.4% 76265058 NA +3238 chr4 + 190214555 162941920 162941919 162942044 125 CAATATCAACTGAATATGTATATTCATAACGAATCTGAAAGCCTCAAATTTCCATCGTTCTCCTTCTGTATCAAGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 69155609 69155608 69155724 25074679 25074678 25074794 116 CAAAATTACTTTAACAGAGAAATTATTAATGTATTCG---GCCTTTATTTTCC------TTCCATATATATTAAGTGGGTTTTTTTTTTTTTTTTTGTAATTATTTCTATTCATCTCTTCTATGA ...x..:.x:.x..:.x:x.x...xx...:.x..::.---....:x.x.....------:...x.x.:...:......x.................x.xx..x...:.x..:x.:.:..:.x... 37M3D13M6D66M 79/116 68.1% 116/94230402 0.0% 9/116 7.8% 93786311 NA +3081 chr4 + 190214555 162945450 162945449 162945538 89 TACTGTGAGTCACTTGGATTTTTGACAAAAAAATTCTATTTCCAGATTAAAAAAGAAAAGAAAAAATTTTTCCAGAATAAAATAAAAAG chr4 - 94230402 50812390 50812389 50812477 43417926 43417925 43418013 88 TATTTTGAATTGCTTTTGTTATAG-CAAAAAAATCTTATTTAGTGTTAAAAAAAGGAAAAGAAAAATTTTTTAAAAAGGATACAAAAGG ..:.x...:.::...xx:..x.x.-.........::.....xxx.x.x.......:...::..........:x.:..x:.x.:....:. 24M1D64M 60/88 68.2% 88/94230402 0.0% 1/88 1.1% 112133060 78081495 +3839 chr4 + 190214555 162951971 162951970 162952050 80 CTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGACTACAGCCATGCGCCACT chr4 - 94230402 18197126 18197125 18197203 76033200 76033199 76033277 78 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACT ..:..:..:xx.x..:...........::x...x.xx.x........:..x.........:......--.:...:..... 67M2D11M 59/78 75.6% 78/94230402 0.0% 2/78 2.6% 144754845 45459710 +3234 chr4 + 190214555 162966644 162966643 162966720 77 GCCGCATAAATGTCTCCTTTTGAAAAGTGTCTATGCAGACCTTTCATCCACTTTTTGATGGGTTTTTTTTTTTTTTT chr4 - 94230402 40447187 40447186 40447263 53783140 53783139 53783216 77 GCCAAATGGACATCCCCTTTTTCAAAAGCTGTTTACAGACTTTTCAAAAGCTACTTAATGGATTTTTTTTTTTTTTT ...:x..::.::..:......xx...:xx.x.x.:.....:.....xxx:..x:..:....:............... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 122519457 67695098 +3187 chr4 + 190214555 162996691 162996690 162996750 60 CACACTTCTATATATATATATACTATATATAAATATATATATATTTACTCTCTATTTCCA chr4 - 94230402 12752144 12752143 12752203 81478200 81478199 81478259 60 CAAACCCCTCACTACATATATATTATATACAGATATATATATATTATTTGTCTATTTCCA ..x..::..xxx..:.......:......:.:.............xx:.x.......... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 150244547 39970008 +3224 chr4 + 190214555 162996872 162996871 162996963 92 TATACTAAATATAAATATATATAT-----TTATATTTATATATATATAAATATATATATATATATTTATATATATATAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 33398772 33398771 33398868 60831535 60831534 60831631 97 TATGAGAAATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAG ...:xx.......x.:.:..::::-----::....xx..:...x..x..:.:.:::.:.:.:...x:.:.......:.x.............x.... 24M5I68M 61/92 66.3% 97/94230402 0.0% 5/92 5.4% 129598100 60616455 +3211 chr4 + 190214555 163034475 163034474 163034566 92 AAAAAGAGAAGAGAGGGGAGGGGAGGGGAGGGGAAAGGGTGGGAAGGGGAAA--CAAAGAGAAAAGAAAAGAAGAGAAAGAAAAAAAAGAAAAG chr4 - 94230402 76099077 76099076 76099170 18131233 18131232 18131326 94 AGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAG .:.:.:...::.....x.....xx........::x:::.x:.:......:.:--.:.:...:x.:...:......:x:.:....x:.:x..:.. 52M2I40M 58/92 63.0% 94/94230402 0.0% 2/92 2.2% 86935398 NA +3357 chr4 + 190214555 163034495 163034494 163034601 107 GGGAGGGGAGGGGAAAGGGTGGGAAGGGGAAACAAAGAGAAAAGAAAAGAAGAGAAAGAAAAAAAAGAAAAGAGAAAAGAAAGAAAAGAAAAGAAATTCTTCTGCTT chr4 - 94230402 68752729 68752728 68752835 25477568 25477567 25477674 107 GGAAGAGGACAGAAAAAGGTGATTTTGAGCACTAGTGCAACAAGGAGGAGTAAGGAGAGAAAAGAAGAAGAGGGAGAAGAAAGAAAACAGCAAAATCTCTTCTCTTT ..:..:...x:.:...:....:xxxx.:.x.x:.:x.x:.x...:.::::x:..:.:::....:.....:..:..:...........x.:x.:..x:......x:.. 107M 64/107 59.8% 107/94230402 0.0% 0/107 0.0% 94281766 NA +3166 chr4 + 190214555 163040236 163040235 163040329 94 GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGGAAGGGAAAGGAAGGAGGGAGGGAGAGAGGGAGGGAGGGA chr4 - 94230402 30232146 30232145 30232239 63998164 63998163 63998257 94 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGA .....x..:.x.:::xx..:.::x:..:.::x...:..x....:.:.:xx....::.:...x..x.....:.......x.x:::....:.:... 94M 57/94 60.6% 94/94230402 0.0% 0/94 0.0% 132808090 57406465 +3001 chr4 + 190214555 163040246 163040245 163040314 69 AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGGAAGGGAAAGGAAGGAGGGAGGGAG chr4 - 94230402 10584953 10584952 10585021 83645382 83645381 83645450 69 AGAGGAGTAGGAGAAGGGAATCGGAGTAGGAAAGGAAAGGAAAGGGGGAAAAATGAAGGAGGGAGGGAG ..::::.x....:::::.:.xx.:..x.:.:......:.:..:..::.::...x............... 69M 44/69 63.8% 69/94230402 0.0% 0/69 0.0% 152455293 37759262 +3628 chr4 + 190214555 163064280 163064279 163064396 117 AAAGAAAAAAGAAGAAAGAAGAAAAAAGAGAAAAGAA-----AGAAAAGAAAGA---AAGAAGAAGAAAGAAAGA-AGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG ...x.....:..........:.:.:::....:..::.-----.:...:x....:---....x:....xx....x.-.:...x..:....:.....:.:..x:xx:.....---..:..:..x.... 37M5I12M3I18M1I34M3D13M 81/114 71.1% 123/94230402 0.0% 12/114 10.5% 132531116 57683439 +4480 chr4 + 190214555 163064302 163064301 163064445 144 AAAAAGAGAAAAGAAAGAAAAGAAAGAAAGAAGAAGAAAGAAAGAAGGAAA--GAAGAAAGAAAGAAAGAAAGAAAGAA-AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGA-AGAAGAAAGAAAGAAA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA ..:..x:..::.............:..:.x.....:.x:.::..:x..:xx--..............::x..:..x...-.x......x::..::..x..x.x..:.:x.::x.:.x:......::..:..-..x..x:...x..... 51M2I26M1I51M1I16M 96/144 66.7% 148/94230402 0.0% 4/144 2.8% 119010313 71204242 +3086 chr4 + 190214555 163064307 163064306 163064456 150 GAGAAAAGAAAGAAAAGAAAGAAAGAAGAAGAAAGAAAGAAGGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAGAAAGAAAGGGAGGA chr4 - 94230402 59127708 59127707 59127857 35102546 35102545 35102695 150 GAGAAAGGCAACCCATAGCAGAAAGGGAAGAAAAAAAAAAATCGAAGGAGCAGAACAGTCACCAAAGACTGCAGACACAGAGAGAGTGGAATGGAGTGAGAGGAAGAATACAGAAACACCAGAGTGTGAAAGGGAGATAAAGAGGGGAGA ......:.x..xxx.x::x......:::.::...:...:..xx:...:..x.::.x..xx.xx..::.xx:x...x.x.:...:..x:::.x:..:x..:..:.....x:x..:..x:xx...:x:x.....::...x.:.:....::.. 150M 83/150 55.3% 150/94230402 0.0% 0/150 0.0% 103936599 86277956 +3148 chr4 + 190214555 163064350 163064349 163064471 122 AAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAG-----AAAGAAAGGGAGGAAGGAAGAAAGGATTA chr4 - 94230402 29503820 29503819 29503946 64726457 64726456 64726583 127 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCA .....:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x:x..:x:.x..x...x.::..:.-----...:xx.x.::.:.x:..:x....:..:. 93M5I29M 73/122 59.8% 127/94230402 0.0% 5/122 4.1% 133560530 56654025 +3824 chr4 + 190214555 163064353 163064352 163064468 116 GAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG----AAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAGAAAGAAAG--------------GGAGGAAGGAAGAAAGGA chr4 - 94230402 44053988 44053987 44054119 50176284 50176283 50176415 132 GAAGAATGGAGGA--GAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGA ......x.:.:..--........::...:.::x......:x::.:.:.x::.----:..............:x..:..x...x.x:..::.x........x:--------------...x:............. 13M2D37M4I46M14I18M 81/114 71.1% 132/94230402 0.0% 20/114 17.5% 119010365 71204190 +3017 chr4 + 190214555 163064357 163064356 163064429 73 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGA chr4 - 94230402 36858304 36858303 36858376 57372027 57372026 57372099 73 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x...:.......:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 126206053 64008502 +3288 chr4 + 190214555 163064359 163064358 163064442 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:....x..::.x.....:.:.:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 126206065 64008490 +3000 chr4 + 190214555 163064379 163064378 163064439 61 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAGAAGAAAGA chr4 - 94230402 36691895 36691894 36691955 57538448 57538447 57538508 61 AGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAA ..:.:.:.:.:..x....:....:.:..x:.x..:.:......::..:x..........:. 61M 42/61 68.9% 61/94230402 0.0% 0/61 0.0% 126372484 63842071 +3253 chr4 + 190214555 163075534 163075533 163075582 49 CTCAAAAAAAAAAAAACAAAAACAAACAACAACAACAAAAAAACACCTT chr4 - 94230402 16619853 16619852 16619901 77610502 77610501 77610550 49 CTCAAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAACCT ......x:.......xx..........................x.x.:. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 146455681 43758874 +3275 chr4 + 190214555 163075535 163075534 163075582 48 TCAAAAAAAAAAAAACAAAAACAAACAACAACAACAAAAAAACACCTT chr4 - 94230402 88287903 88287902 88287950 5942453 5942452 5942500 48 TCATTAAAACAAAAACAAAACAAAACAACAACAACAAAAAAACATCTT ...xx....x..........xx......................:... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 74787632 NA +3006 chr4 + 190214555 163079332 163079331 163079378 47 AAACAACAACAACAACAACAACAACAACAAAAAGCATACTTTTTTCC chr4 - 94230402 90456309 90456308 90456355 3774048 3774047 3774094 47 AAAAAACTACAACAACAACAACAACAAAAAAAAGCACAAAGTTTTCC ...x...x...................x........:.xxx...... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 72623023 NA +3678 chr4 + 190214555 163085850 163085849 163085920 71 CTGCAGCCTTGACCTCCTGGGCTCAACCAATCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACTACACGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:.....:x:.x..:.....:....x::x.:.x.xx:x........:............:.......... 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 144888724 45325831 +3131 chr4 + 190214555 163213522 163213521 163213606 85 TACATATCTATCTCTACATATA--TCTGTGTATATATGCATATATATGTATGGATAGATATCTATATGTGTATATATAGGTATATAT chr4 - 94230402 15725428 15725427 15725514 78504889 78504888 78504975 87 TACCTACCTTTCTCTCCACATAATTCTGTGTACACATGTATATCTGCATATATGAAAGTATCACTGTATTTTTATATATGTATGCAT ...x..:..x.....x..:...--........:.:...:....x.:::...:x:x.::....xx.:.:.x.x......x....::.. 22M2I63M 58/85 68.2% 87/94230402 0.0% 2/85 2.4% 147488094 42726461 +3391 chr4 + 190214555 163216219 163216218 163216357 139 AGGAAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGGAAGGAAG----------------GAAGGGAGGAGAGAG----------GGAGGGAGGAG-----AGAGGGAAGGAATTGGCAAGATATACCC chr4 - 94230402 7589947 7589946 7590116 86640287 86640286 86640456 170 AGCACAGAAGGGGCCAGGAAAAAGCAGGAAGGGATTAGTTGAAAGGAAGAACAAAGGAAGGGGCAGAGATATGGAGGAGAGGGAGATAATTCGGCTGGTGAGAAGGAAGGAAAATGAAGAGCATTTGGAGGGAAGAGCCTTAGCAGGCCAGGACTTGGGCAGAAAGACCC ..x.x:.....::xx.:.:.....x.......:.xx.:xx:....:.:...x:........::x...::x.x...:.::...:..----------------.....:....:.:x.----------.......:...-----:x...xx....x....xx...x.x.... 85M16I15M10I11M5I28M 93/139 66.9% 170/94230402 0.0% 31/139 22.3% 155626272 34588283 +3138 chr4 + 190214555 163223181 163223180 163223247 67 CAAGACTCCATCTCAAAA-CAAACAAACAAACAAAAAACAACTACAAAAAAAAAAAAAACATAAAGAA chr4 - 94230402 33205655 33205654 33205721 61024682 61024681 61024748 67 CAAGTTTACCTCTTAAAAACAAACAAACAAA-AAAAAACCAATACCAAAAAAAAAAAAACCAACAGAA ....x:.x.x...:....-............-.......x.x...x..............xx.x.... 18M1I12M1D36M 55/66 83.3% 67/94230402 0.0% 2/66 3.0% 130017526 60197029 +3232 chr4 + 190214555 163223193 163223192 163223273 81 TCAAAACAAACAAACAAACAAAAAACAACTACAAAAAAAAAAAAAACATAAAGAACCAAATCCAATCCAAGACCATTCAGA chr4 - 94230402 21619678 21619677 21619755 72610648 72610647 72610725 78 TTAAAACAAACAAACAAACAAAAACCAACAACAAAAAACAGGCACACCTA---GGCTAGATCCATTCTGTAACACTTAAGA .:......................x....x........x.::x.x..x..---::.:.:.....x..::x:..xx..x... 50M3D28M 57/78 73.1% 78/94230402 0.0% 3/78 3.8% 141603515 48611040 +3031 chr4 + 190214555 163223193 163223192 163223247 55 TCAAAACAAACAAACAAACAAAAAACAACTACAAAAAAAAAAAAAACATAAAGAA chr4 - 94230402 18021888 18021887 18021942 76208461 76208460 76208515 55 TCAGAAAAAGGAAACAAACAAACAACAACAACAACAAAAAAAAACAGGGAAAGAA ...:..x..:x...........x......x....x.........x.x:x...... 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 145201305 45013250 +3010 chr4 + 190214555 163230060 163230059 163230146 87 AAAGAAAGGAAGAAAGAAAGAAAGAGGAGGGAGGGAGGAAGGAAGGAAGGAGACAGAGAGAAAGAAAGAAGAAAAAAATAGATTTTT chr4 - 94230402 36858304 36858303 36858390 57372013 57372012 57372099 87 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCATGTTCTT ..x.....x...::...:.......::.:x::x:.xx:....:..:.:.::.....:..x..::......:..:xx.::.x:..:.. 87M 53/87 60.9% 87/94230402 0.0% 0/87 0.0% 126371756 63842799 +3247 chr4 + 190214555 163247408 163247407 163247481 74 CCTTGATTTCTTGCCTATATATATATATACATACATATATATACACATACATATATATATATATACACATATTC chr4 - 94230402 48865240 48865239 48865313 45365090 45365089 45365163 74 CCTAGATTTCTTGCTTATACACTTTCAAATATATTCCTATATATAAAGACATACATACATAGATATATCTATTC ...x..........:....:.:x.x:.x.:...:x:x......:.x.x.....:...:...x...:.:x..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 114382168 75832387 +3726 chr4 + 190214555 163247576 163247575 163247658 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGCCCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:...........::x...x.xx.x........:............:.:....x...--.:....::.. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 145050450 45164105 +4033 chr4 + 190214555 163291733 163291732 163291875 143 GTGACAGAGGGAAACCTGGTCTGTTAAAGAAAGGAATGAAAAGAAAGAAAAGAAGAGAAGGGAAGGGAAGGGGAAGGGGGAGGAAAAGGGGAAGGAGAAGGGAA------AGAATAAGGAAGAGGAAAAGAGAGATAGAAAAGAAAGGC chr4 - 94230402 84397240 84397239 84397385 9833018 9833017 9833163 146 GTGATGACTGGAAACATGA---GCACAATAATGACACGTGAGGAAACAAATTAGAGAAAGGCACGGGAAGGAGAGAACAAAGGAAAAGGAGAAGAAGAAAGGAATATGGTaaaaaaaaaaaaaaaaaaagaaaGATGGGAGTAAAGTGC ....:::xx......x..:---.:xx..x..x.:x.:.x:.:....x...xx.::::....x.x.......:..:::x::.........:....:....:....------.:..x..::..:.::......:....:.:.:x:..:x.. 19M3D82M6I39M 88/140 62.9% 146/94230402 0.0% 9/140 6.4% 78894493 NA +3262 chr4 + 190214555 163291797 163291796 163291855 59 GGGAAGGGGAAGGGGGAGGAAAAGGGGAAGGAGAAGGGAAAGAATAAGGAAGAGGAAAA chr4 - 94230402 39824561 39824560 39824619 54405784 54405783 54405842 59 GGGAATGGCAAGGGGAAAGAAGAAAGGAGGCAGAAAGGAGAGAATAAAAACCAGGAAAA .....x..x......:.:...:.::...:.x....:...:.......::.xx....... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 123467236 66747319 +3478 chr4 + 190214555 163302241 163302240 163302314 74 CTGCAACCTCCACCTCCCGGGTTCAAGAGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTGAAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:.........x.x...x:xx.x........::...........:...:x.x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 145105115 45109440 +3068 chr4 + 190214555 163315767 163315766 163315887 121 AGTATGTCAGTTATGATGTTTTAATTTTTTTAGTGGGTTTTTAAAACTGTTT-TTAGTATTGTAGTTTTTTTTTACTATTATAATATTTTTTCTAGAGTTTGTAATACACATTTACAACTAA chr4 - 94230402 11921885 11921884 11922005 82308398 82308397 82308518 121 AATATGTTTATTTTGATGTATTAGCTACTCTA-CACGAATTTAAATCTCTGTGTTAATAGTGTGGTTATTTTTTCCTGTTGCAAAGTTATTTCTGTATTTTTAAAGGCATCTTTGGAATTAA .:.....:x:..x......x...::.x:.:..-::x.xx......x..x.x.-...:..x...:...x......x..:..::..x:..x.....:x.x...xx..x:..:x...:x..:... 32M1D19M1I69M 78/120 65.0% 121/94230402 0.0% 2/120 1.7% 151393882 38820673 +3005 chr4 + 190214555 163322265 163322264 163322334 70 TTTTCTCTCAACTCTTCTACTTCACTCCATTCCTTCTGCAGCCAAAAATCAGAAAGAAGGTGGATGGCAC chr4 - 94230402 94199822 94199821 94199891 30512 30511 30581 70 TTCTTTGTCGTCTCCCCTTCTTCCCCCCCTTTCCTCTGCCAACAAAAATAAGAGAGAAGGTGAAACGCGC ..:.:.x..:x...::..x....x.:..x..:.:.....x:x.......x...:........:.xx..:. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 69122443 NA +3094 chr4 + 190214555 163324734 163324733 163324786 53 TAAGGTGAAAAAAAAAAAAAACAAACAAAAACCACCAAAAAACAGAAACCTCA chr4 - 94230402 2440466 2440465 2440518 91789885 91789884 91789937 53 TAGGTTGAAAAAAAAAAAACACACACAAAAAAAACCAAGAAAATAAAACCTCA ..:.x..............x...x.......xx.....:...xx:........ 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 160884268 29330287 +3444 chr4 + 190214555 163326135 163326134 163326239 105 CTGATGTCGTTCCACAGCAATGAGAACCAGAGAGAAAATGGACACAGTGATTGAAACACATTGCACAAAAGGATTCAACTTACACATCGCCTCACCAAAGACCCA chr4 - 94230402 93921585 93921584 93921689 308714 308713 308818 105 CTGGTGACGATCCAGAGCGATGGCAGCGAGGGTCAGTACGGACACATGGACAGAGCAGTACTGCACAAACCGGCTGATGTGACACATCAGCTTTCCAAAGACCCA ...:..x..x....x...:...:x.:.x..:.xx.:x.:.......xx..:x..:xx::.:........xx.::.x.xx.x.......:x..:x........... 105M 68/105 64.8% 105/94230402 0.0% 0/105 0.0% 69404550 NA +3191 chr4 + 190214555 163342931 163342930 163343006 76 CAATGTCTCTTTTCTCCCTTCTCTCCTTCTCTCTCTCTCTCTCTCTCACAGACACACACACACACACACACACACA chr4 - 94230402 32106675 32106674 32106750 62123653 62123652 62123728 76 CAACGTTTTCCCTCTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA ...:..:.::::...:x.x...:x::...::..:...:.:x::.:...::x:...............:....x... 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 131236256 58978299 +5921 chr4 + 190214555 163350502 163350501 163350955 454 AACTTCCTCATAGGCAATCTGGCCTTTTCTGATATCTTGGTTGTGCTGTTTTGCTCACCTTTCACACTGACGTCTGTCTTGCTGGATCAGTGGATGTTTGGCAAAGTCATGTGCCATATTATGCCTTTTCTTCAATGTGTGTCAGTTTTGGTTTCAACTTTAATTTTAATATCAATTGCCATTGTCAGGTATCATATGATAA--AACATCCCATATCTAATAATTTAACAGCAAACCATGGCTACTTTCTGATAGCTACTGTCTGGACACTAGGTTTTGCCATCTGTTCTCCCCTTCCAGTGTTTCACAGTCT----TGTGGAACTTCAAGAAACATTTGGTTCAGCA-TTGCTGAGCA-----GCAGGTATTTATGTGTTGAGTCATGGCCATCTGATTCATACAGAATTGCCTTTACTATCTCTTTATTGCTAGTTCAGTATATTCTGCCCTTAGTTTGTCTTA chr4 - 94230402 69767203 69767202 69767656 24462747 24462746 24463200 454 AACATCCTCATTGTCAACCTGTCCTTTTCTGACCTTCTAGTGACCATCATGTGTCTTCCCTTTACCTTTGTGTATACTTTAATGGACCACTGGATTTTTGGGGAGGCCATGTGCAAATTGAACCCTTTTGTGCAATGTGCCTCGATCACAGTCTCGGTCTTTTCCTTAGTTCTTATTGCTATCGAACGCCATCAGCTGATCATCAAC-CCCCGTGGCTGGAGGCCAAACAACAGG-CACGCCTACATGGGGATCGCTGCCATATGGGTTTTGGCCACGGCTTCCTCCTTGCCTTTCCTGATCTACCACGTGCTGACAGATGAACCCTTCAGAAACAT-------AACATTTGATGAATATAAGGACAAATACGTGTGCCTGGACCTCTTCCCCTTGGACACTGCCCGGCTTTCTTATACCACCACTCTTTTGGTGATTCAGTACTTTGGACC---ACTTTGTTTTA ...x.......x.x...:...x..........:x.::.:..x::xx.xx.x..:::x..:..:..x:.x::..x.:::..:x....:..x.....x.....x:.:.:.......x.xx.x.xx......x.x.......:x..::.:x::..:..::::..xx::...:.x::x.....:..:.xxx.x:....xx....x.--...-:...:.:x..::x::::x....:..::-..:.x....x.xxx...x...:.::.x...::x:.:.x:x:x..:x:..x:.:x..::.:.:::.x.x:...:xx..----x:..:.x.:.:x........-------.:..-...x...::.-----:..::..:x.:..:x.x..x::x.xx..x.:x..:x.xxx.x.:x..x.:.x...:.:.x..:.x...x.::.......:x..xx:..---.x.....:... 202M2I3M1D27M1D77M4I20M7D4M1I10M5I88M3D11M 250/442 56.6% 454/94230402 0.0% 24/442 5.4% 93583299 NA +3051 chr4 + 190214555 163434830 163434829 163434888 59 CTGATACAGAACATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATACAGACACA chr4 - 94230402 89821269 89821268 89821327 4409076 4409075 4409134 59 CTGCTGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCA ...x.:x:...x..........x.x.........:.:.:.:...:...:.....x.x.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 73613561 NA +3630 chr4 + 190214555 163442359 163442358 163442428 70 CTCCTGGGTTCAAGCGATTCTTGTGCCTCAGCCTCTCAGGTAGCTGGGACTACAGGAGCTCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:...........:.x...x::x.x........:...:........:......x.x.--......::.. 58M2D10M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 145245220 44969335 +3520 chr4 + 190214555 163448016 163448015 163448089 74 CTGCAACCTCCACCTCCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.::........::x...x.xx.x........::.:.........:......x.:.... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 145250890 44963665 +3232 chr4 + 190214555 163609598 163609597 163609646 49 AAGGTCTTTCTGTGTGTGTGTGTGTGTATATATATATATACGTATATAT chr4 - 94230402 9151845 9151844 9151893 85078510 85078509 85078558 49 AATGCTTTTTAGTGTGTGTGTGTGTGTATATATAGATATCTGTATATAT ..x.::...:x.......................x....x:........ 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 154457753 35756802 +3098 chr4 + 190214555 163609602 163609601 163609725 124 TCTTTCTGTGTGTGTGTGTGTGTATATATATATATACGTATATATATAATACACGTATATATTTAT-----ATACACACACATATATA--TATATTTTTTTGCCCTGGAACCT---TTTTTATTCTTAAAGGAA chr4 - 94230402 19559290 19559289 19559417 74670986 74670985 74671113 128 TTTTTTTGTGTGTGTGTGTGTATATATATATATATAC------AGCTAATTTTTGTATATTCTtgtggtgggttcacactggtggacaactaaactctaccacactgctctctcacttcccattctcaaaggaa .:...:...............:...............------.xx....x:x:......x:..:.-----:.x.....xx:.:x.:.--..x.:.:.x:::.x...xxx:..---..:::.....:....... 37M6D23M5I17M2I23M3I18M 82/118 69.5% 128/94230402 0.0% 16/118 13.6% 144050312 46164243 +3046 chr4 + 190214555 163620580 163620579 163620633 54 CACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95968496 NA +3212 chr4 + 190214555 163620584 163620583 163620637 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95968500 NA +3295 chr4 + 190214555 163620586 163620585 163620639 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 95968502 NA +3070 chr4 + 190214555 163620588 163620587 163620641 54 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 95968504 NA +3097 chr4 + 190214555 163642940 163642939 163643017 78 TCTCCATACATACATATACATATGTGTATGTGTGTGTGTATATATACACACACATATATATACACATATATGTATGTT chr4 - 94230402 52481226 52481225 52481301 41749102 41749101 41749177 76 TCTTCTTCTTTACATGGATATAAGCGTACATGTATGT--ATACATACGCACATACTGATATAAACTTATATGTGTGTT ...:.x.x:x.....:x.:...x.:...::...:...--...:....:....:.:xx.....x..x.......:.... 37M2D39M 54/76 71.1% 76/94230402 0.0% 2/76 2.6% 111161714 79052841 +3446 chr4 + 190214555 163687303 163687302 163687374 72 CTGCAAACTCCACCTCCCCGGTTCAAGGGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:x.:xx.x..:.:x........x.x...x.xx.x........:............:......x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 145490177 44724378 +3776 chr4 + 190214555 163733168 163733167 163733287 120 TGTATGTGTGTATATATATATATATATATATATATATATATATATATATATATACACGTGTATATATATATATACACGTGTATATATATATACACACACACACACACACAGACACATACA chr4 - 94230402 73121104 73121103 73121213 21109190 21109189 21109299 110 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGT----------GAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ..:...::.:.x:...:.:.....:.:.x.x::..:x:..:...::....x:......x......:.----------.x...:.....x....:.x....x.x.......x::.:.x:.. 67M10D43M 73/110 66.4% 110/94230402 0.0% 10/110 9.1% 90612064 NA +3850 chr4 + 190214555 163733203 163733202 163733285 83 ATATATATATATATATATACACGTGTATATATATATATACACGTGTATATATATATACACACACACACACACACAGACACATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.::...x..:.....x..:....:..::.x.::..xx...:.:.............x.....:.::x... 83M 57/83 68.7% 83/94230402 0.0% 0/83 0.0% 155337415 34877140 +3127 chr4 + 190214555 163733205 163733204 163733277 73 ATATATATATATATATACACGTGTATATATATATATACACGTGTATATATATATACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395860 85834543 85834542 85834615 73 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA ..:.:.:...:.:.::.:.x:::.:...x..:....::.:.:x..:..xx...:...............x... 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 155337417 34877138 +3309 chr4 + 190214555 163733207 163733206 163733289 83 ATATATATATATATACACGTGTATATATATATATACACGTGTATATATATATACACACACACACACACACAGACACATACACA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.:...:.:.:..::x::..:...x..:...::::..:x..:..xx...................x.x...x..:x.:. 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 155337419 34877136 +3078 chr4 + 190214555 163733252 163733251 163733307 56 TATATATACACACACA------CACACACACAGACACATACACACACACACGCACACATATT chr4 - 94230402 90815415 90815414 90815476 3414927 3414926 3414988 62 TGTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCATTTT .:...:.......:..------......:..........:......:.x:.:...x...x.. 16M6I40M 45/56 80.4% 62/94230402 0.0% 6/56 10.7% 72917837 NA +3406 chr4 + 190214555 163742284 163742283 163742373 90 GCTAGTACTAAAAGGGATTAACTCTTCTTTCCCTTTCTCTCCCTCCCTTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCTCCCT chr4 - 94230402 51457768 51457767 51457854 42772549 42772548 42772635 87 GCTGGTACCCAAACTGATGATCTCTT---TCTGTATCCATCCATCTCTTTCTCCCCCTACCACACTCCATCTCTTCCTTTCTTTTTCCCT ...:....:x...xx...x.x.....---..:x.x..:x...x..:.....:.:....x..x.x....x..:..:...::..:.:..... 26M3D61M 61/87 70.1% 87/94230402 0.0% 3/87 3.4% 112284516 77930039 +3316 chr4 + 190214555 163742344 163742343 163742452 109 CTCTCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCG--CTACCTCCTTCCTTCCTCCCTTCCT----TCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTCTTTCTTTTCTCTTTCT chr4 - 94230402 93005077 93005076 93005191 1225212 1225211 1225326 115 CCCGCCCCATCCTCCCCTCCCCGTGCAGCTGCCTGGGCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCT .:.x.:..x...::.......:x.x:xx..x...x.--::.::......:..:x.:......:----:.x:.:...::..:..x......:x.....x..:..xx.:........ 36M2I25M4I48M 71/109 65.1% 115/94230402 0.0% 6/109 5.5% 70737267 NA +3054 chr4 + 190214555 163742421 163742420 163742494 74 TCCTTCCTTCCTTTTCTTTCTTTTCTCTTTCTTTCACTCTTCTTTTCTCCTTTCCTTTCCTTTTCTTTTTTCTT chr4 - 94230402 82033161 82033160 82033234 12197169 12197168 12197242 74 TCCTTCATTCCTTGTTCTTCTTTTATCTTTTGTTTATGCTCCTCCTTTCCCTTTCTTGTTTTGCCTGTTCCATT ......x......x.::.......x.....:x..:.:x..:..::.:...:..:...x::..x:..x..::x.. 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 81709260 NA +3172 chr4 + 190214555 163812300 163812299 163812355 56 CATCTCTTCCTATATATACATGTATACACATACATGTATACATATACACGTATATA chr4 - 94230402 30865730 30865729 30865785 63364618 63364617 63364673 56 CACTTTTTCTTATGTATACAAGTATACACACATGTGAACACATACACATGCACATA ..::.:...:...:......x.........:.::..x.:.....:...:.:.:... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 132946570 57267985 +3730 chr4 + 190214555 163817281 163817280 163817387 107 TTGTGTGTATACATATACATACATACATATATAT--------GTACATATACACATATACATATATATGTACATATACACATATACATACATACATATACATACATATATACACA chr4 - 94230402 73121099 73121098 73121213 21109190 21109189 21109304 115 TCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.....:..:.....x......:.:...:.:.x--------.......:::.:.x:....::x:...:.:::x:....:...x.:.::.x:...x.x...:....:....x:.. 34M8I73M 69/107 64.5% 115/94230402 0.0% 8/107 7.5% 90696182 NA +3778 chr4 + 190214555 163817300 163817299 163817409 110 TACATACATATATATGTACATATACACATATACATATATATGTACATATACACATATACATACATACATATACATACATATATACACATGCATATATACACATATACATA chr4 - 94230402 73121104 73121103 73121209 21109194 21109193 21109299 106 TGCATGCATATTCATACACATATACACAGAAGC----ATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:...:.....x:..::...........x.x:.----..:x.......:::.:.x:....::x:..:..:.:x:........x.:..::x..:.x.x.....:..::... 33M4D73M 69/106 65.1% 106/94230402 0.0% 4/106 3.8% 90696196 NA +3262 chr4 + 190214555 163847497 163847496 163847590 94 CTTACCTGCTACTACCTTTTTTTTTCATT-----TGATCTTTTCGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 16394937 16394936 16395030 77835373 77835372 77835466 94 CTTAGCTGTTGTCATTTTCTTTAATCATCCATGGTAATCCTTT-----TATAATTTGCTTTTTTTTTCTCCCTTTCTTTCTGTTTTTATTTTACTTGTT ....x...:.:::.::..:...xx....:-----.:...:...-----..:.:..............:.:::...:...:.x.....x....x:..x.. 29M5I9M5D51M 63/89 70.8% 94/94230402 0.0% 10/89 11.2% 147452560 42761995 +3037 chr4 + 190214555 163847500 163847499 163847574 75 ACCTGCTACTACCTTTTTTTTTCATTTGATCTTTTCGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 36437302 36437301 36437376 57793027 57793026 57793101 75 ATTTGTTGCAACTTTTTTTTTTCTCTTAGTCACTTAGAACTAATAACAACTCTGTTTTTTTTTTCTTCTTTTTTT .::..:.:.x..:..........x:..::..x:..x...:..xx:x:x:..:.x..........:..:....... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 127410198 62804357 +3280 chr4 + 190214555 163847511 163847510 163847597 87 CCTTTTTTTTTCATTTGATCTTTTCGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 5049170 5049169 5049256 89181147 89181146 89181233 87 CCTTTTCAATTAAGTATATAATTTCCAAACACAGCTAGCTTCTCTTTTTTTTCTTCCTATTTTTTTTCCCATTTCTCTTTCCTTTCT ......:xx..x.x.xx..xx....x..x:....:.x....:.:........:..::.x........:::x...:.:...::...:. 87M 58/87 66.7% 87/94230402 0.0% 0/87 0.0% 158798341 31416214 +3035 chr4 + 190214555 163847516 163847515 163847593 78 TTTTTTCATTTGATCTTTTCGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 55838937 55838936 55839014 38391389 38391388 38391466 78 TCTCTTCATGAAAGCGCTTCGAAGTTAAATCTGCCTTTTTTTTGTTGTTTTGTTTTTCTTATTTGTTTCCTGTGTTTT .:.:.....xx:.x.x:......x.xx.:.:...:........x..x....x.....:..x...x...::.x.x.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 108008579 82205976 +3035 chr4 + 190214555 163847516 163847515 163847593 78 TTTTTTCATTTGATCTTTTCGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 55827030 55827029 55827107 38403296 38403295 38403373 78 TCTCTTCATGAAAGCGCTTCGAAGTTAAATCTGCCTTTTTTTTGTTGTTTTGTTTTTCTTATTTGTTTCCTGTGTTTT .:.:.....xx:.x.x:......x.xx.:.:...:........x..x....x.....:..x...x...::.x.x.... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 108020486 82194069 +3026 chr4 + 190214555 163847535 163847534 163847607 73 CGAATTACAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG chr4 - 94230402 46756765 46756764 46756837 47473566 47473565 47473638 73 CAAATCATAGTTGGCTTTCCATACTTCTGTTTCTGGGTGTTTTTTGTTTGTTTTTTTTTTTTTGGAGGGGGGG .:...:.:....x.....::x.x:..:.x...:.xxx.x......x...x.............x...:x..:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 117090770 73123785 +3094 chr4 + 190214555 163873037 163873036 163873085 49 CCGTCTCAAAAAAAAAACAAACAAACAAACAAAAAAAAACAAACAAACA chr4 - 94230402 4915769 4915768 4915817 89314586 89314585 89314634 49 CCCTCACAAAAACAAAACAAACAAACAAACAAAAAAAAACCCAACAACA ..x..x......x...........................xx.xx.... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 158957268 31257287 +3055 chr4 + 190214555 163873040 163873039 163873076 37 TCTCAAAAAAAAAACAAACAAACAAACAAAAAAAAAC chr4 - 94230402 87068637 87068636 87068673 7161730 7161729 7161766 37 TTCCAAAAGAAAAACAAACAAACAAACAAAAAAAAAC .::.....:............................ 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 76804403 NA +3920 chr4 + 190214555 163890479 163890478 163890554 76 TTGCTTCCATTAACTGTGTGACTTTGGGCAAATAACTTGATCAATCTATGCCTTAGTTTCCTCACCTATAAAATGA chr4 - 94230402 11947202 11947201 11947277 82283126 82283125 82283201 76 TTGTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGA ...::::..:............:..:..:x.:.x....:...x::..:..:.::.......:..:x...:...... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 151943277 38271278 +4214 chr4 + 190214555 163929910 163929909 163930041 132 ATATATATAATATATATAATATATTAT-ATATTTATATTATATATATTATATATAATATATATAATATATATAATATATATATAATAT------------ATTATATATAAATATATT-ATATATACTATATTATATATAGCTAAT chr4 - 94230402 67910063 67910062 67910208 26320195 26320194 26320340 146 ACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAAT .:.....:....:xx.x......:...-.x..x:...x..x.......:......:............:..xx.....:..:.:.x..------------....x....x..:..x.x-...:...:x.x.xx....x.x::.... 27M1I60M12I18M1I27M 96/132 72.7% 146/94230402 0.0% 14/132 10.6% 96019847 94194708 +3388 chr4 + 190214555 163937236 163937235 163937298 63 ATTAGTCAATACATACATATACATACAAACATATACATACACATATATACTCACATACCCAAA chr4 - 94230402 28470357 28470356 28470419 65759984 65759983 65760046 63 ATTAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTAAA ....:x:.:......::......:.x.x.::...:..:.......:.........x.:.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 135466879 54747676 +3289 chr4 + 190214555 163959305 163959304 163959442 138 ATCCTAAGCAAAACAACAACAACAACAAAAAAAAAAAACAACAAAAAAACAAAAAACACAA------AACAAACAAAAAAAAAGCTGGAGGCATAGTGATACCCATCTTCA-AACTATACTACAG--GGCTACAGTAACCAAGACAG chr4 - 94230402 49498326 49498325 49498463 44731940 44731939 44732077 138 ATTCTGGAAAAAACAATAACAACAACAAAAAACACGAGGGACATTAAAAATAAACACACAAAAAAACAACCACCAACCAAAAAAC---AGACAAAAT------TTTCTTCACAACTGTAATATAGCTGTTTACAGTTACAAAACCAG ..:..:::x.......:...............x.x:.:x:...xx....xx...x......------...x.x...xx.....:.---..:..x.:.------:x......-....:..x..:..--.x:......x..x..:x... 61M6I18M3D9M6D8M1I13M2I20M 93/129 72.1% 138/94230402 0.0% 18/129 14.0% 114460979 75753576 +3008 chr4 + 190214555 163959311 163959310 163959360 50 AGCAAAACAACAACAACAACAAAAAAAAAAAACAACAAAAAAACAAAAAA chr4 - 94230402 87749171 87749170 87749220 6481183 6481182 6481232 50 AACCAACCAACAACAACAACAAGAAAAAAATCCATCAGAAAAAAAAAAAA .:.x..x...............:.......xx..x..:.....x...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 76210140 NA +3183 chr4 + 190214555 163959314 163959313 163959361 48 AAAACAACAACAACAACAAAAAAAAAAAACAACAAAAAAACAAAAAAC chr4 - 94230402 28943674 28943673 28943721 65286682 65286681 65286729 48 AAAACAACAACAACAACAAAAAAAAAAAACACCTAAACTAAAATAAAC ...............................x.x...xx.x..x.... 48M 42/48 87.5% 48/94230402 0.0% 0/48 0.0% 135015640 55198915 +3443 chr4 + 190214555 163959315 163959314 163959385 71 AAACAACAACAACAACAAAAAAAAAAAACAACAAAAAAACAAAAAACACAAAACAAACAAAAAAAAAGCTG chr4 - 94230402 10856138 10856137 10856208 83374195 83374194 83374265 71 AGAGAACAACAATAACAAAACAAAACAAAAACAAACAAACAAATACCACAGATAAATCAAAGAACTGGCTG .:.x........:.......x....x..x......x.......x.x....:.xx..x....:..xx:.... 71M 54/71 76.1% 71/94230402 0.0% 0/71 0.0% 153103177 37111378 +3026 chr4 + 190214555 163959319 163959318 163959367 49 AACAACAACAACAAAAAAAAAAAACAACAAAAAAACAAAAAACACAAAA chr4 - 94230402 25068047 25068046 25068095 69162308 69162307 69162356 49 AACAATGACAACAAAAAGAACTAATGACAAAAAAATAAAATACACAAGA .....::..........:..xx..::.........:....x......:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 138891272 51323283 +3339 chr4 + 190214555 163986166 163986165 163986284 119 TTCTGATATTCAGAACTGTATCTCTTTTTAGAAATTATACGAAGGCTCAGAGTTTCCTTTCCTTTTCTCCTAATTAACCTCTTCTTTTTTTTTTTTTTTTTTTTT--TTTTTTTTTTGAGA chr4 - 94230402 66044430 66044429 66044550 28185853 28185852 28185973 121 TTTTGATATACAGAATGAGCTGTCAAATTGTGCAATTTATAAAAGCTCAGGCTTTTAATTTAGTATCTCCTAACATAACTGCTTTTTTCTTTTTCTTTTTTTTTCAGTCTTTTTCTGGAGA ..:......x.....:x:xx.x..xxx..:x:x.x.x..::..:......:x...:xx..:xx.x........:xx.x..x:.:....:.....:.........:--.:.....:.x.... 105M2I14M 77/119 64.7% 121/94230402 0.0% 2/119 1.7% 97941736 92272819 +3117 chr4 + 190214555 164006421 164006420 164006488 68 AGGAGAAAAATGAAAAATAAAAAAAAGGAAAGGAATGAAAACCACCTACAAGATATAGAAAATTACCT chr4 - 94230402 54553078 54553077 54553145 39677258 39677257 39677325 68 AGGGGGAGGTGGAAAAAAAAAAAGAAGGAAAAAAATGAAAGCTCTTTACAAGGCAAAACTAATTACCT ...:.:.::xx......x.....:.......::.......:.:x::......::.x.:xx........ 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 109453343 80761212 +3066 chr4 + 190214555 164006981 164006980 164007035 55 CTGAAATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA chr4 - 94230402 25798625 25798624 25798679 68431724 68431723 68431778 55 CTGACATTTGGAAAAAAAAAAAAAAAAAGGAGGAGAATAATAAAAAGGAGGAGAA ....x..:..:.................::.::.:..x..x.....::.::.... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 138208356 52006199 +3002 chr4 + 190214555 164007334 164007333 164007404 71 AGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAGCAAACTTTTCAAGGTATA chr4 - 94230402 65617528 65617527 65617598 28612805 28612804 28612875 71 AGAACCCATGGAAAAAAAAAAAAGAAAGAAACAAAATAGTTAAAGAAAAAGAGCAGAAACTTAAAGATACA ...x:....xxx...........:...:...x....x..xx.:.:.....:....:.xx:..x...:..:. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 98389806 91824749 +3073 chr4 + 190214555 164013332 164013331 164013387 56 ATCAATATACACAATTAGAGGAGAAAAAAGAAAAAAGGATAGAAGGAGAATAAAGA chr4 - 94230402 57020226 57020225 57020281 37210122 37210121 37210177 56 ATCAGTGGACACAATGAGACAAAAAAAAATATAGAAAAAGAGAAGGAGAATAAAGA ....:.:x.......x...x:.:......x.x.:..::.x................ 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 106993106 83221449 +3074 chr4 + 190214555 164014188 164014187 164014259 72 CTCAAAAAAAAAAAAAAAGTAAAGAGAGAAAGCAGAAAGTCAAAAAAATGAGGACAGGGTGGAATAAAAAAG chr4 - 94230402 21030145 21030144 21030216 73200187 73200186 73200258 72 CTCAAACAAAAACAAAAAGTAAATAAATAAATTGGAAATTGAAAGTGTTGAAGACAGTGTACAAAAAAACAG ......x.....x..........x.:.x...x::....x.x...:x:x...:.....x..:x..x....x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 142984043 47230512 +3483 chr4 + 190214555 164029670 164029669 164029741 72 CTGCAACCTCTGCCTCCTGGGTTAAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGACATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.......x...:.x...x..x.x........::..........:x.:....x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 145832544 44382011 +3433 chr4 + 190214555 164039998 164039997 164040156 159 TTGTATATAT----AATATATATACAAGTATAATTTATATATACAAGCATAATTTATATATACAAATTATATATTAGTATATATATGCATATATACATATATAAGTATATTTTTCAATTATATAAAGGTATTTAAAAATATTTTA--TATCCATAATTTTATATA chr4 - 94230402 51708405 51708404 51708561 42521842 42521841 42521998 157 TTATATAAATTTCCAATTTTTATATAATTTCAGCCTATGTTTATAATTTTGATTTACATATTCAAACTATATTTTTGTATATATA-------ATGTCAATTAAAAAATAAGTTTCAA-TGCATTAATGTCTTTAAAATTTGTTTACTTGTCACTACTGTTGTACA ..:....x..----...x.x....:..x.x:.:::...:.x..:..x:x.:.....:....x....:.....x..x.........-------..::xx..xx..:x...xx......-.::..x..x..x.......x.xx....--.:..xx..x.x..:..:. 10M4I71M7D25M1D27M2I18M 103/151 68.2% 157/94230402 0.0% 14/151 9.3% 112331593 77882962 +3439 chr4 + 190214555 164080581 164080580 164080703 123 CAAATTTCTCCTAAAATTTGTTTTTTATTATCTTATGTGAATTTCAAAGAAATCTAATAGTATTCTATTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTATATATATAT chr4 - 94230402 70982563 70982562 70982681 23247722 23247721 23247840 119 CAGATTACTACTACAATTGGAGGTAGGCTATTTCATATATATATTTAT----TCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..:...x..x...x....x.xxx.xx::...:.:..:.:x..x.:x.x----..xx:..::x..:.x::x...........:.......::....:.x:...x.........:...:.:.:.. 48M4D71M 76/119 63.9% 119/94230402 0.0% 4/119 3.4% 93098018 NA +3123 chr4 + 190214555 164080642 164080641 164080702 61 ATTCTATTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTATATATATA chr4 - 94230402 70982618 70982617 70982678 23247725 23247724 23247785 61 ACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACA .:.:.x..x:x...........:........:....:.x:...x:.......::...:.:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 93098024 NA +3127 chr4 + 190214555 164080643 164080642 164080701 59 TTCTATTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTATATATAT chr4 - 94230402 70982623 70982622 70982681 23247722 23247721 23247780 59 TTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..::x............:.......:::...:.x:...x..:......::..:.:.:.. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 93098020 NA +3016 chr4 + 190214555 164080651 164080650 164080687 37 TGTGTGTGTGTGTGTGTGTGTATATATATATATATGT chr4 - 94230402 89821282 89821281 89821318 4409085 4409084 4409121 37 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGT .........x.x......................... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 74259369 NA +3052 chr4 + 190214555 164080657 164080656 164080714 58 TGTGTGTGTGTGTGTATATATATATATATGTGTGTGTATATATATATCATTGCAAAAA chr4 - 94230402 85036782 85036781 85036839 9193564 9193563 9193621 58 TATGTGTGTGTGTATATATATATATATAGGTTTGTAAGCACAGAAAGCAGTACAAAAA .:...........:..............x..x...:x::.:.x.x.x..x.:...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 79043875 NA +3201 chr4 + 190214555 164081691 164081690 164081739 49 TGCACATGTGCATGCATATACACACACACACACATGCACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATAT--ACAGCCACACACATGCACACACACACAC ......:...:...:....--...xx....................... 19M2D28M 42/47 89.4% 47/94230402 0.0% 2/47 4.3% 149116853 41097702 +3340 chr4 + 190214555 164140153 164140152 164140236 84 AGGCACACACACACTCATGCACACACAC-ACATATACACATACACACACATATATACACACACACTATATATACACATACACACA chr4 - 94230402 67999848 67999847 67999932 26230471 26230470 26230555 85 AGTCAGATACAGATTTTTACTCATGCTCTGTATGTGGACACACACATGCATATATATTCATGCACTATATATATATATGCACACA ..x..x.:...x.:.:x.:.x..::.x.-::..:.:x...:.....::........:x..::...........:.:..:...... 28M1I56M 57/84 67.9% 85/94230402 0.0% 1/84 1.2% 96140305 94074250 +3174 chr4 + 190214555 164199657 164199656 164199715 59 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGA chr4 - 94230402 67652084 67652083 67652142 26578261 26578260 26578319 59 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGA .....::...x...:...:..xx.x.:.:.:.:...................:.xx... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 96547573 93666982 +3257 chr4 + 190214555 164199659 164199658 164199717 59 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGA chr4 - 94230402 67652084 67652083 67652142 26578261 26578260 26578319 59 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAATTAGA .....::...x...:...:..xx.:.:.:.:.:...................:.xx... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 96547575 93666980 +3326 chr4 + 190214555 164199661 164199660 164199713 53 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 67652084 67652083 67652136 26578267 26578266 26578319 53 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA .....::...x...:...:..x:.:.:.:.:.:.................... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 96547577 93666978 +3308 chr4 + 190214555 164203558 164203557 164203660 103 CTGCTTTACTCAAAGTCCAGCTGTTTCAATGTTAATTTTACTACCCTCACCCTGTGCCAAAAAAACAAAACAAAACAAACCTTCATAGAAACATCCAGAATAA chr4 - 94230402 44361448 44361447 44361539 49868864 49868863 49868955 92 CTGTCTTCCCCGACAGCTAGATGAT---ATGTTGATTTTGAAACCCAAAGCCTGCATCAAAAAAACAAAACAAAACAA--------AAAAACACCCAAACTGA ...::..x.:.:.x:x.:..x..x.---.....:.....:xx....xx.x....:::.....................--------.:.....:...:.x.:. 25M3D50M8D17M 66/92 71.7% 92/94230402 0.0% 11/92 12.0% 119842110 70372445 +3519 chr4 + 190214555 164220201 164220200 164220266 66 TGTATATATTCCTATATATATATACACACATACATATATATACACACATACGTATATATACACATA chr4 - 94230402 48167038 48167037 48167103 46063300 46063299 46063365 66 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTA ..........x.:......:....:.x........:x.:..:::.x.....::..:..:...::.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 116053163 74161392 +3242 chr4 + 190214555 164224055 164224054 164224117 63 ACACTATCCTCTAGTCCAAGCTTGTCTAACCATGGCCCACAGGCCACATGTGGCCCAGGACAG chr4 - 94230402 51236108 51236107 51236170 42994233 42994232 42994295 63 ATACCAGCATGTAGATGAGGCATGTCCAGCCATGGCCTGTGGGCCACATGCAGCCCAGGACAG .:..:.x.x.x...x:x.:..x....:.:........::::.........::........... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 112987947 77226608 +3239 chr4 + 190214555 164252314 164252313 164252370 57 TCTCTCCACCATCAAAAAAACAAAACAAAACAAAACAAAACAAAGCAAAAAGCAGAA chr4 - 94230402 7464480 7464479 7464536 86765867 86765866 86765923 57 TTTCCCCACCATGAAACAAACACACACACACAAAACGAAACAAAACAAAAAGCAAAA .:..:.......x...x.....x.xxx.x.......:.......:.........:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 156787834 33426721 +3047 chr4 + 190214555 164255384 164255383 164255439 56 GAAAGATAAAAAAAAAAAAAAATCAATGAACAAACAAAAAAAAAAGTAGAAAAGAA chr4 - 94230402 53293867 53293866 53293922 40936481 40936480 40936536 56 GGAAGCAAAAAAAAAAAAAAAGTGAATGAATAAATAAATAAAAATGGAGAAAGCAA .:...xx..............:.x......:...:...x.....x.x.....:x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 110961517 79253038 +3102 chr4 + 190214555 164285806 164285805 164285868 63 CTCTGTAGTTCTTTAAAAAAAAAAAAAAAAAAAAAAGGCCAAACTGAAGCCACAAATTGTATG chr4 - 94230402 35323467 35323466 35323529 58906874 58906873 58906936 63 CCCTATAACATTTTGGAGGGAAAAAAAAAAAAAAAAGACAAGACTGTAGCCACATTTTTTATG .:..:..::x:...::.:::.................:.x.:....x.......xx..x.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 128962339 61252216 +3074 chr4 + 190214555 164312299 164312298 164312339 41 CTGTGAATTATTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50117647 50117646 50117687 44112716 44112715 44112756 41 CTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .....x......:...:.:...:.................. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 114194652 76019903 +3154 chr4 + 190214555 164336973 164336972 164337045 73 AAGAAAAGAAAGAAAGGAAGGAAGAGAGGAGGGAAGGAGGGAGAGGGGAAAGGAGGGTGAGAAGAGAAAGGAA chr4 - 94230402 73368864 73368863 73368936 20861467 20861466 20861539 73 AAGCAGATAAAAATTAGAAGACAGGAAGGAGGGAAAAAGGGAGAGAAGGGAAAAAGATGACAAGAGGATGAAA ...x.:.x...:.xx:....:x..::.........::........::.::.::.:.:...x.....:.x.:.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 90968109 NA +3153 chr4 + 190214555 164340505 164340504 164340570 66 CTGCAACCTCCACCTCCTGAGTTCCAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACCGC chr4 - 94230402 18197126 18197125 18197191 76033212 76033211 76033277 66 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC ..:..:..:xx.x..:...:....x..:.x...x.xx.x........:............:..::. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 146143379 44071176 +3281 chr4 + 190214555 164387943 164387942 164388028 86 AAAATGTTATATACATGCATACATTATATATACATATATATACACACATATATATATTCTATTTGATGAAGTAAATAATATGATTT chr4 - 94230402 72042969 72042968 72043052 22187351 22187350 22187434 84 AAAATACTTAATAAATGAGTAAATTACATATATATATATATACACACATTTACTTATTCAAAAGAA--AAGTGAGAAACAAGATTT .....::.xx...x...x:..x....:.....:................x..:x.....x.xxx:.--....:.:x..:.x..... 66M2D18M 61/84 72.6% 84/94230402 0.0% 2/84 2.4% 92344974 NA +3288 chr4 + 190214555 164434815 164434814 164434904 90 CCTAAGTCACAT-TGAATATATATATATATATATATATATATATATATATATATAT--ATACATACAGACACACACACACACACACACACAAA chr4 - 94230402 8395780 8395779 8395872 85834531 85834530 85834623 93 CCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA ..:.:.:..::.-..x..:.:.::...x.:..:...x..:....:...::x..:..--.....:...x.........x.....x.::x.:... 12M1I43M2I35M 62/90 68.9% 93/94230402 0.0% 3/90 3.3% 156039035 34175520 +3339 chr4 + 190214555 164434818 164434817 164434902 85 AAGTCACATTGAATATATATA-------------TATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACACACA chr4 - 94230402 14964786 14964785 14964883 79265520 79265519 79265617 98 AAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...x..x.x..x..x......-------------:.:.x....:.x.:::.:.::.:.::.:...:..:......x........::............ 21M13I64M 60/85 70.6% 98/94230402 0.0% 13/85 15.3% 149470032 40744523 +3287 chr4 + 190214555 164434827 164434826 164434900 74 TGAATATATATATATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x:.:...:.:.::...x.:..:...x..:....:...::x..:.:xx.:.x...............x..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 156039038 34175517 +3637 chr4 + 190214555 164434827 164434826 164434906 80 TGAATATATATATATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACACACAAACA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x:...:.:.::...x.:..:...x..:....:...::x..:..xx.....x.............x.....x.::..:. 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 156039036 34175519 +3915 chr4 + 190214555 164434831 164434830 164434916 86 TATATATATATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACACACAAACATATCTCAAAC chr4 - 94230402 8395791 8395790 8395876 85834527 85834526 85834612 86 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAAC .:.:...:.:.::...x.:..:...x..:....:...::x.....xx.x.................x.......::x..xxx.... 86M 61/86 70.9% 86/94230402 0.0% 0/86 0.0% 156039040 34175515 +3099 chr4 + 190214555 164434834 164434833 164434899 66 ATATATATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:........xx..x.....::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 149470015 40744540 +3455 chr4 + 190214555 164434834 164434833 164434902 69 ATATATATATATATATATATATATATATATATATATATACATACAGACACACACACACACACACACACA chr4 - 94230402 24136193 24136192 24136261 70094142 70094141 70094210 69 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA ..:.::........x...:x.xx.:.x......:...........:...x...x.......:.:x:... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 140298641 49915914 +3201 chr4 + 190214555 164434858 164434857 164434913 56 ATATATATATATATACATACAGACACACACACACACACACACACAAACATATCTCA chr4 - 94230402 30570625 30570624 30570680 63659723 63659722 63659778 56 ACATTTGTATGCATGCATCCAGACACACACACACAGGCACAAGTACACATATCTCA .:..x.:...::..:...x................x:....x::.x.......... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 133864233 56350322 +5972 chr4 + 190214555 164436261 164436260 164436401 141 TTTATCTGTGTTAATTATTAGATGTATTTGCATAAAAAGGAGATCTTTATTT-TTAAAAGTTCATCTGTTCCTGCTGTTTATTCCTCACTTGAAGTAATAATCCAGTATAACATATA-TAGCAACAGGAGAATATAAACTCTC chr4 - 94230402 40524661 40524660 40524799 53705604 53705603 53705742 139 TTTGTTTGTGTTA----CTAAGAATATTTGCATGAAAACAGGATATTTGTTTATTAAGAGTTCATCTTCTCCTGCTGTGTATTCCCTACTTTAAGTAGTCATATTCTTTAAGATTTATTAGCAAAAGGAGACCATAAACCCTC ...:.:.......----:..::x:.........:....x::...x...:...-....:.........x:.........x......::....x.....:.x..x:xx.x...x..x..-......x......x:......:... 13M4D35M1I64M1I25M 104/137 75.9% 139/94230402 0.0% 6/137 4.4% 123911600 66302955 +3665 chr4 + 190214555 164436279 164436278 164436361 83 TAGATGTATTTGCATAAAAAGGAGATCTTTATT-TTTAAAAGTTCATCTGTTCCTGCTGTTTATTCCTCACTTGAAGTAATAAT chr4 - 94230402 45255204 45255203 45255287 48975116 48975115 48975199 84 TGGAAGCATTTGCATGCAAACAGTATGTTTGCAACTTACTAATTTGTCTGCTCCTGCTGTTCATTCCTCACCTGAAGTTATAAT .:..x.:........:x...x::x..x...::x-:...xx.:..::....:..........:.........:......x..... 33M1I50M 60/83 72.3% 84/94230402 0.0% 1/83 1.2% 119181075 71033480 +13759 chr4 + 190214555 164506616 164506615 164507426 811 GTTTTCCTCTCTCCTTTAAAATGCTCTGTGTCT--CAGGAATTGCCACAGGATTCTATGACA--CTGTATTGACCTGGGGACATTGTTCTCAATCAAAA-----GTTTGAAT-GTAATTTCAATTACATTGC-TGAAGATTTACCTACTCATTGATTTTGGATGTGAATTC-ATTCCTTAGGTGAAAGACCTAAAGAAGGCTAGTGAAAAGCCTCTAATGGGGGGGGGGGGGGGTCGGGGGAGGGAACAA----AGAAAACAACACGAAATTCTTACTTGTTCATTT----CCAGAGCAGTGTAGAAGAAGTATGTAAATAATGAAGCTATTTGTATCACCTGTCACTCTGCTTTATCCAAAAAGTAACTCTACGGTTCCTTTAAACAATTCTGCCTGGCATCTATTTGGATGGGTGATAACTGTAAAACATTTTCAGTGTCAGGAACTATCCATTTTAATGTCATT--------TTTCATTTTAATGGAGTCGGAAGCTTTGAGAACA---GTC-----CTGATGAAAATCTTCAACTGGCTCTGAAACCACTGTTATGTTATACAGGGAAAGAAAGAGGCAG--CAGTTTTGTCTCTGTAAATACGCTATAATATGCACAATC-----AATCTTTAATTGAGAGTGAAAGAAGAAAAA--------TTTAATGTTTTGAAACTGATTAGATGTATTTCCCAGTGGAT-----ATGTTTTTCCCCCACAATTAAAAAGGCAAACATTTGGAGTATTTAAGACAAGTATGCTGTTGT--TTTGCTAAATATTTGTTGAAACATTTATTTTTGCTTCCC---TGAAAAAAAAATGTC-----CTCTCCTTTAGGCTATGTGATTCTTTCCAAAAGTTT chr4 - 94230402 69436265 69436264 69437060 24793343 24793342 24794138 796 GTTCTCCTCTTTTCTGTA---TCCCCTTTCTTCAGCAGAAAATGCCACTGAAATATGGGACAGTCTTTATCAGCACAGTAGTGTTG----CAGACATGATCTCTGTTTAAGTAGTCATTTCCATTTCAGCGCATACAGCATT--TTACTAATTCCTTTGAAGTGTGAAATCTATTGCT-----------CTTGTAAAATGCTAGAGTATTGC----ACTggggggggggggggg--gggggAAGGAATGTCTGTAGA---------GGAATTTTAATTTGCTAAGTCAAAATCACAACATCATACATTAA-----------------TTATTTATACTAATTGTCACTCTACCTTATCTAGGAAATAATTCT----------TAAACAATTGTGCCTGGCATCCTTTTTGATATGTGATAACTGTAAAACATTATCAGTGTCGGGAACTGTACATGCTCATGTCatttttttttattttattttaatGGAGCTGAAAGTGCTGGGAACAAAGGTCTACAGCTGATGTAAATCTTCATCCGA--TTAACACCAAGTCTGAAGTATGTTGTGCATGAGAGAAACTGTACAGCCTTGTTTCTCACAAC------TCATAAGCAAACACGGAGGAATTTGTAGTTAAGAGTGAAAAGAAAAAAACCCATATCTCTACTGTTTTGGAATTGACTAGGCTTGTAT-CCAATGGATTGCAGACATTCTTTGTGTGCATT---AGAACTGAGCATTCATAGAATTT----TAAGTGCATTGCAGCAGTTTGCTAAATATTTGTTGTAGCA---ACATTTTCTTTCCATTTAAAAAAGAACTACCAGCAGCCATAATCTAGGCGTTCTGACTCATCTTATATGTTT ...:......:.:..x..---.x.:..x.x.::--...:..x......x.:.x.x.:x....--..x...:::.x::.x::::...----..:x..x:.-----....:.:.-..x.....x...x..x:..-.:x..xx..--:....x...xx...x:::......x..-...x..-----------.:.:x.:..x.....x.x.xx..----.x................--......:....::x----...---------.:....:.x.:...:.x.x.:----:..x.:..x::..x.xx..-----------------:.....:..::.x:.........:.:.....:.::..:...:...----------.........x...........:x...x...:x...................x........:......:.x...x:.x........--------...:............::.:...:x:..:.....---...-----......x.........x.:.:--:.:.x....xxx:.:x:x...::x.x.x.x..:...::.x.--...::....:...xxx..:------.x...x...x.xx.-----...:.x..:..:.........::.:.....--------.:..x.......:..:...:...::x.:.x.-...:.....-----.::..:..:x:x::..x.---.:.:x::.:....::x..x....----:....::::..:x.:--..................x.:..---.:x...x...:..---.:.....:..x.::.-----.:x.xx.:.....xx.x...:..x.:::.x.x.... 18M3D12M2I27M2I22M4D9M5I8M1I19M1I9M2D27M1I6M11D23M4D18M2D14M4I3M9D21M4I19M17D45M10D85M8I34M3I3M5I21M2D41M2I19M6D14M5I30M8I31M1D9M5I18M3D23M4D15M2I23M3D13M3I15M5I36M 501/730 68.6% 796/94230402 0.0% 147/730 20.1% 95070351 NA +3052 chr4 + 190214555 164512791 164512790 164512860 70 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACGTGTTATATTTTAATGGTTTTTAAATATGTT chr4 - 94230402 5590967 5590966 5591036 88639367 88639366 88639436 70 AAGCAAAAGGGAAAAAAAAGAAAAAAAAGAAAAATGGAATCAGTGATCTTTATTGGGTTTTAAATATATT ..:x....:::........:........:.....x:..xx::x.:xx:....x...x..........:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 158921824 31292731 +3041 chr4 + 190214555 164518032 164518031 164518101 70 CTTCAGTTCCTCCCTGAGCTTGGTTATTTCTTGTCTTCTGCTAGCTCTGAGGTTTGTTTGCTCTTGGTTC chr4 - 94230402 59117673 59117672 59117742 35112661 35112660 35112730 70 CTGCAGCCCCTGGTTGAGCTGTGCTACTTCTGGCCTTTTGCTAGCTCAGCGTGTTATCCACCCTTGGTTC ..x...::...xx:......xx.:..:....x.:...:.........x.x.xx..:.:::.:........ 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 105400359 84814196 +3149 chr4 + 190214555 164520227 164520226 164520291 65 GGTCTTTTTTGTTGATGTTGTTGTTGTTGCTTTCTGTTTGTTTGTTTTCCTTCTAACAGTCAGGC chr4 - 94230402 66916764 66916763 66916822 27313581 27313580 27313639 59 GGTTTTTTTTGTTG------TTGTTGTTGTTTTCTGTTTTTTGTTTTTCCTCATAATAATCTGAC ...:..........------.........:.........x..xx.......:x...:.:..x.:. 14M6D45M 48/59 81.4% 59/94230402 0.0% 6/59 10.2% 97603463 92611092 +11884 chr4 + 190214555 164570231 164570230 164570558 328 ATTTTGATGAAAGCTAATTATGTCCCCCTTCCTTAATCCTCCTTCCATCATACCAAAGAATGACTATCAGGAGAGTGCCAGCTGGACCACTCTTCTCCTTCACTCAGACACTGACTGTCAAGAACTTTATTTACCACCAAGATGGAAAGTATCTTTCCTCCTGCCTTAGGGCTTCTACATATAATTTTGACAGCCTTTACTTTATCAAAGAAATTGTGTCAATT-TAAAAACTGCAGCCTTCCTTACT---GTGG-----TTGAATATCAAATTTT---AGATACAGAAAGATCTCTTTAATGCCAACTTAAAAGAAAATTTAAGGCCAAATGAGAGAAG chr4 - 94230402 69453849 69453848 69454171 24776232 24776231 24776554 323 ATTTTGATAAAATGTAATTTTCTATGTCTTCCTTGATTTTTCT---ATCACAATGAAGAATTTAGGTCTTGAATTTGCTAGCTGGACC---------CTTTACTCAGAC--TG--TGCCAAGGACTTTATCCACCACTATGATTGAAAGT-TCTTCCTTTCTGCCTTAGGGCTTCTATGCATAATTTCGACAGCCTGTGCTTTATCAAAGAAATTATGTCAATCGTTAAAACTGCTGCTTTCCTTATTTACTTGAAAGTTTTGAATATCAAATTCCAAGAGGAAAAGAAAAGCAACGTGAACGAAAACTTTCAAGGGAATGTAAAACCAAAGGGAGGAGG ........:...xx.....x.x.x:x:.......:..::.:..---....:.x::......xxxx:..xx..:xx...:.........---------...:........--..--..:....:.......::.....:.x...x......-....:.:.:.................:::.......:........x.:................:.......:-.x........x..:.......:.---x..:-----..............::---..:x.x.....:::xx.x.x..:.xx.....xx...::...x...::.....x.:::..:. 43M3D42M9D12M2D2M2D35M1D73M1I23M3I4M5I16M3I61M 231/311 74.3% 323/94230402 0.0% 29/311 9.3% 95116382 NA +3566 chr4 + 190214555 164601725 164601724 164601802 78 AACCTGAATAGCCAAAGCAATCCTAAGCC-----AAAAAATAAAAAACAAAAACAAACAAAAAAAACAAAAAACAAAGCCAGA chr4 - 94230402 91116566 91116565 91116644 3113759 3113758 3113837 79 aacctgaatgatt----ctatTCAAAGCCTCACAAAAAAATAAAGATTAAAAACAAACAAAAAAAACAACCAACCAAGCCAAA .........::::----.x..:.x.....-----..........:.x:.....................xx...x......:. 13M4D12M5I49M 60/74 81.1% 79/94230402 0.0% 9/74 12.2% 73485159 NA +3457 chr4 + 190214555 164709494 164709493 164709586 93 GCATCATGATCTTGCCTCACTGCAACCTCTGTCTCCTAGGTTCAAGCAATTCTCTTGTCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCGC chr4 - 94230402 18197116 18197115 18197199 76033204 76033203 76033287 84 GCATCATGTTCT---------ACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ........x...---------:..:..:xx:x..:..:........::x...x.xx.x........::::...........:....x....:. 12M9D72M 60/84 71.4% 84/94230402 0.0% 9/84 10.7% 146512378 43702177 +3384 chr4 + 190214555 164710253 164710252 164710308 56 CTCTCCTTTATAAAAAAAAAAAAAAGCAACTGCTAAAAAAAAAAAAAAAAGTGGTA chr4 - 94230402 66771632 66771631 66771687 27458716 27458715 27458771 56 CTCTTATTTATAAAGAAAAAAAGGTGCAACTGCTTCAAAAAAAAAAAAAAAAGATA ....:x........:.......::x.........xx..............:x.:.. 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 97938621 92275934 +3225 chr4 + 190214555 164738865 164738864 164738938 74 CTGCAACCTCCGCCTCCCGTATTCAAGCGATTCTCCTGCCTCAGCATCTCAAGTAGCTGGAATCACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.:.x:......:.x...x.xx.x......x.:..............::...x.:.... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 146541739 43672816 +3176 chr4 + 190214555 164742419 164742418 164742494 76 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCACAAGGAATAAAAAAAAATTGAG chr4 - 94230402 35652685 35652684 35652759 58577644 58577643 58577718 75 AAAAACAAACAAAAAAAAAAGGAAAAAAAAGCATGGAAGCAAATGAAAACATGATGGGGAA-AAAAAAAGATTAGG .....x...x..........::........:x.x::..:x...x:.....x.x.:::....-.......:...::. 61M1D14M 54/75 72.0% 75/94230402 0.0% 1/75 1.3% 129089734 61124821 +3087 chr4 + 190214555 164742421 164742420 164742500 80 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCACAAGGAATAAAAAAAAATTGAGAAAAAA chr4 - 94230402 92992740 92992739 92992819 1237584 1237583 1237663 80 AATGAGAACAAATCACAGAAAAGAAAAACCAAAAGAAAGAAAAATAGTCCAAAACTGATTAAAAAAAAATGCAGAAAAAA ..x:.:..x...xx.x.:....:.....xx....:...:.....x.::.:x.x.xx..x...........xx........ 80M 56/80 70.0% 80/94230402 0.0% 0/80 0.0% 71749681 NA +3106 chr4 + 190214555 164754530 164754529 164754589 60 TTATTGTTCTTTCCTGGAGGTATTTTTTTTTTTTTTTTTTTTTTTTTGCTGTTAAAAAAA chr4 - 94230402 51331845 51331844 51331904 42898499 42898498 42898558 60 TTATAGATCATTCTTTGAAAGCACTTTTTTCCTTTTTTTTTTTTTTTGCTGTTTAAAAAA ....x.x..x...:.x..::xxx:......::.....................x...... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 113422685 76791870 +3012 chr4 + 190214555 164762664 164762663 164762706 43 AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAG chr4 - 94230402 49250049 49250048 49250091 44980312 44980311 44980354 43 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAG .........:............::x:...:.........:... 43M 36/43 83.7% 43/94230402 0.0% 0/43 0.0% 115512615 74701940 +3025 chr4 + 190214555 164763454 164763453 164763526 73 TGAACCAAATAGAAATTCAGGCTAAAATTAAAGAAAAAAACTTTTTAAAGAATAAATCTGCAATAGTGAATTA chr4 - 94230402 34120365 34120364 34120435 60109968 60109967 60110038 71 TAGACTGAAAAGAAATACAAGTTAAAAGTAAAGAAAAATGCCTTTTAAAAAGTAGAAATGC--TAAGGAATCA .::..::..x......x..:.:.....x..........x:.:.......:.:..:.xx...--..:x....:. 61M2D10M 51/71 71.8% 71/94230402 0.0% 2/71 2.8% 130643089 59571466 +3046 chr4 + 190214555 164785633 164785632 164785677 45 TTATTGTGTGTGTGTGTGTATATATATATATATATCTTTAACCTT chr4 - 94230402 19559292 19559291 19559336 74671067 74671066 74671111 45 TTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTT ..x...............................:xx:...::.. 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 145226341 44988214 +3011 chr4 + 190214555 164807919 164807918 164807963 45 TCGGTTTTTTTTGTTTTTTTTTTTTTTTTTTTTGCTTTTTTGTTT chr4 - 94230402 71036259 71036258 71036303 23194100 23194099 23194144 45 TCGGGTTTTTTTGTTCTTTGTTTTGTTTTTGTTGCTTGTTTGTTT ....x..........:...x....x.....x......x....... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 93771660 NA +3481 chr4 + 190214555 164809863 164809862 164809920 58 TTCACTAAGTTTTTTTGTTTGTTTTGTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTA chr4 - 94230402 56535004 56535003 56535061 37695342 37695341 37695399 58 TTCACTGACTTTTTTTGTTGTTTTGGTTTCGTTTGTTTTCCTTCTTGTTTTGTTTTTA ......:.x..........xx...x....:x........::..:.......x...... 58M 47/58 81.0% 58/94230402 0.0% 0/58 0.0% 108274859 81939696 +3979 chr4 + 190214555 164811079 164811078 164811172 94 GAAGGAAGGAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGTGGAGGAGGGGGGAGGGGGAGGGGGAGGGAGAGGGAGAGGGAGAAGG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .:..:.:...x:.x.....x:....:...x...::.:x...::...:...:x.x..:.......::..:..:.:........::.::::x..:. 94M 60/94 63.8% 94/94230402 0.0% 0/94 0.0% 124345304 65869251 +3788 chr4 + 190214555 164826264 164826263 164826389 126 AAACAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGAAGAGATGAAAGAAGGAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGA---GAAAACACCGGAAAGGAGAGGAATAAAG ...:......:..........::.:.::...:.:.:.xx:x....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....---...:.x.:x::.:.:.::.....x:... 95M3D28M 76/123 61.8% 123/94230402 0.0% 3/123 2.4% 134293100 55921455 +3123 chr4 + 190214555 164826265 164826264 164826354 90 AACAAAAAGAAAGAAAG--AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858285 36858284 36858376 57372027 57372026 57372118 92 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .....x.x..:.:.x..--..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 17M2I73M 59/90 65.6% 92/94230402 0.0% 2/90 2.2% 127967980 62246575 +3291 chr4 + 190214555 164826268 164826267 164826394 127 AAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGAAGAGATGAAAGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGG--GGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGAC--AAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:..........::.:.--:..:.......xx.x:.:....x..:::xxx....x--.....xx....x.:.::..x:.:..:.::......x:.x.xx:.:.....::.:.:x..:. 26M2D36M2D61M 77/123 62.6% 123/94230402 0.0% 4/123 3.3% 134293104 55921451 +3157 chr4 + 190214555 164826276 164826275 164826359 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 127967982 62246573 +3017 chr4 + 190214555 164827302 164827301 164827372 71 AAAACAAAAAAAAAAAAAAAAAAAGAAAGAAAATAATATCATTAAAAATTTTAAAAAAATTAAA-AATGTAA chr4 - 94230402 4674548 4674547 4674619 89555784 89555783 89555855 72 AAAACTAAAAAAAAAAAAAAAAGAAGAAGAATACTATAGCAATAGAAAGGTGAAAGTAATAAAATAATGAAA .....x................:.::.....x.:x...x..x..:...xx.x...:x...x...-....x.. 64M1I7M 54/71 76.1% 72/94230402 0.0% 1/71 1.4% 160152754 30061801 +3141 chr4 + 190214555 164830666 164830665 164830716 51 TTCCATCTACTCTTGATTTTTTGTTGTTGTCGCTGTTTTTTTTTTTTTTTT chr4 - 94230402 67801517 67801516 67801567 26428836 26428835 26428886 51 TTTTATTTGCTGTTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTT ..::..:.:..x...x...x.........::....x............... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 97029149 93185406 +3144 chr4 + 190214555 164831891 164831890 164831948 58 TAAAGGTCTATATATATATATATACACACACACACATATACACACATACACACATATA chr4 - 94230402 79214678 79214677 79214735 15015668 15015667 15015725 58 TATAGGTTTCTATGCATATGCATACACACCCACACATATACATACATGCTTAAATTTA ..x....:.x...::....::........x............:....:.x:.x..x.. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 85617213 NA +3044 chr4 + 190214555 164831945 164831944 164832006 62 TATATGTACATATACACACACATATATGTACATATACACACACATATATATGTATATATACA chr4 - 94230402 47095165 47095164 47095226 47135177 47135176 47135238 62 TGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .:.::..:::.:.::.........:.........x..xx.:x...:.:....:.....:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 117736780 72477775 +3019 chr4 + 190214555 164831961 164831960 164832029 69 CACACATATATGTACATATACACACACATATATATGTATATATACACACATATATATGTGTGTGTGTGT chr4 - 94230402 13766364 13766363 13766432 80463971 80463970 80464039 69 CACAGGTATGAGTACAAGTGTATGCACGTTTATATGTATACTTACACACACAGCCACGTGGATGCGTGT ....x:...:x.....x:.::.::...:.x..........:x........:.xx:.:...x:..:.... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 151065597 39148958 +3408 chr4 + 190214555 164831961 164831960 164832057 97 CACACATATATGTACATATACACACACATATATATGTATATATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGTTTTT chr4 - 94230402 71630131 71630130 71630227 22600176 22600175 22600272 97 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTGCTGTT ...x:.::.:::.:..............x.....::...x.x.::.::...:.:.x..::....x:.:.......x.x:x.:x..x.x.:..:.x.. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 93201830 NA +3047 chr4 + 190214555 164832002 164832001 164832053 52 ATACACACATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATGT chr4 - 94230402 4406423 4406422 4406474 89823929 89823928 89823980 52 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGT ....::.:.....xx.:.:x....................x:.......x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 160425579 29788976 +3116 chr4 + 190214555 164836265 164836264 164836315 51 AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATA chr4 - 94230402 70707583 70707582 70707633 23522770 23522769 23522820 51 AAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTA ...x.:.....x.::....::..x.x......................:.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 94128682 NA +3160 chr4 + 190214555 164836265 164836264 164836315 51 AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACATA chr4 - 94230402 70707579 70707578 70707629 23522774 23522773 23522824 51 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACA ..:....x.:.....x.::....::..............:.:.......:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 94128686 NA +3048 chr4 + 190214555 164836266 164836265 164836313 48 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATACACACACACA chr4 - 94230402 70707582 70707581 70707629 23522774 23522773 23522821 48 AAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACA ....x.:.....x.::....::..x.............:......... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 94128684 NA +3916 chr4 + 190214555 164836315 164836314 164836403 89 AAAAAAATATATATGTGTATATATATTTGTATATATATACATAAATATA----TGTATATGTGTATATATATATATACATAAATATATGTATA chr4 - 94230402 37363025 37363024 37363112 56867291 56867290 56867378 88 AAAAAATTGCAACATTGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA-----ATATGTATA ......x.::.xxxx...:..:...:.........:..:..:.......----.............:...x:.:.:...-----......... 49M4I26M5D9M 66/84 78.6% 88/94230402 0.0% 9/84 10.7% 127473290 62741265 +3395 chr4 + 190214555 164836342 164836341 164836402 61 TGTATATATATACATAAATATATGTATATGTGTATATATATATATACATAAATATATGTAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ...:..:x.......:.:.:.x...:..:...::......:.....:.:........x:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 131876774 58337781 +3912 chr4 + 190214555 164850847 164850846 164850952 106 CATGATGTAAGGTTTCATTCACAAC-TTACATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681897 56681896 56682003 37548400 37548399 37548506 107 CATAATGTAAATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ...:......:x..x:..x:....:-..x:x:.:.....xx.x.x:......x:.:....x:.:...:....:..x:.......x...x...x....x......... 25M1I81M 74/106 69.8% 107/94230402 0.0% 1/106 0.9% 108168950 82045605 +3044 chr4 + 190214555 164850864 164850863 164850946 83 TTCACAAC-TTACATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200244 4200243 4200327 90030076 90030075 90030159 84 TTTACAATGCTACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..:....:-:.....x.x..:xx:..x.xx..x............:.:.:.........x....::...:xxx.......x... 8M1I75M 59/83 71.1% 84/94230402 0.0% 1/83 1.2% 160650620 29563935 +3452 chr4 + 190214555 164850867 164850866 164850939 73 ACAACTTACATATATATATAT-------ATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681904 8681903 8681983 85548420 85548419 85548499 80 ACAACTAAAATGGATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ......x.x..:x....x:..-------...x..........:...::.:.:.:...:.....x:.:............. 21M7I52M 56/73 76.7% 80/94230402 0.0% 7/73 9.6% 156168963 34045592 +3329 chr4 + 190214555 164850869 164850868 164850957 89 AACTTACATATATA----------TATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681906 56681905 56682004 37548399 37548398 37548497 99 AATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ..:...:.....:.----------:.....xx.x.x:......x:.:....x:.:...:....:.xxx.......x...x...x....x.......... 14M10I75M 65/89 73.0% 99/94230402 0.0% 10/89 11.2% 108168963 82045592 +3008 chr4 + 190214555 164850880 164850879 164850933 54 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x.x........... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 156168950 34045605 +3326 chr4 + 190214555 164850880 164850879 164850954 75 ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681929 56681928 56682003 37548400 37548399 37548474 75 ACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT .:.....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x....x......... 75M 55/75 73.3% 75/94230402 0.0% 0/75 0.0% 108168951 82045604 +3222 chr4 + 190214555 164850882 164850881 164850935 54 ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.x............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 156168952 34045603 +3068 chr4 + 190214555 164850887 164850886 164850942 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 72115539 NA +3044 chr4 + 190214555 164850889 164850888 164850953 65 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.x.xx:.........x..x....x..........:. 65M 50/65 76.9% 65/94230402 0.0% 0/65 0.0% 159985435 30229120 +3282 chr4 + 190214555 164850889 164850888 164850944 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 72115541 NA +3258 chr4 + 190214555 164850891 164850890 164850955 65 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865454 4865453 4865518 89364885 89364884 89364949 65 TAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 159985437 30229118 +3496 chr4 + 190214555 164850891 164850890 164850946 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 72115543 NA +3282 chr4 + 190214555 164850893 164850892 164850948 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 72115545 NA +3090 chr4 + 190214555 164850895 164850894 164850969 75 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTC chr4 - 94230402 92735348 92735347 92735414 1494989 1494988 1495055 67 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCT--------GAATCTC .::....x.....:...:..:.:......x.x......:.x.........:.x...:::.--------....... 60M8D7M 51/67 76.1% 67/94230402 0.0% 8/67 11.9% 72115547 NA +3121 chr4 + 190214555 164850895 164850894 164850948 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 160650621 29563934 +3648 chr4 + 190214555 164852622 164852621 164852802 181 GGAAGGAAGGAAGGAAAAA-AGGAAGGAAGGATAAAAGGAAGGAAGGAAGGGATGAAGGAAGGAAAAAAAGGAAAGAAGGAAGGAGGGAAGGAAGGAAGAAAGGAAGGAAAGAGGAAAGGAAGGAAGGGAGAGAGGGAGGGAGAGAGGGAGGGAGGGA---GGGAAGGAAAGAGGAAAGGAAGGA chr4 - 94230402 57301000 57300999 57301184 36929219 36929218 36929403 185 GGGGGAAAGGTGGGACAAGTGGGAATGTAGGGAAAAAGGAAGAAATGTTTGGAATTTACGAGAAAACGTGGGAACGTAGGAGAAAAGGTAGGGAAAATGTAAGAATGTAGGGGATAATGTGGGAAAAGGTGGGAAAGCAGGGGAAATGGTGGAAAAAAATTGGGAATGTTGGGGAAAAGGGTGGA ..::.:....x:...x..:-:....x.x...:x.........:..x.xxx...xxxx:x:..:...x:x:....x.x....:::.:..x...:.::.x.x...:.x.x.::.::x..x.x::.:..:..x.:..::.x:..:..:.x..x..:.:::.---.....x.xx:.:.:.....:x... 19M1I138M3I24M 104/181 57.5% 185/94230402 0.0% 4/181 2.2% 107551622 82662933 +3153 chr4 + 190214555 164854453 164854452 164854517 65 GTCTATGGACAGAGTGATGAGCACAAGAGACAACATCTCCATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56196930 56196929 56196994 38033409 38033408 38033473 65 GTTTAGTAACAGTGAGATAGATATAGGAAACAGCTTTTCTACTTTTTTTTTTTTTTGTTTTTTTT ..:..xx:....x.x...::::.:.:..:...:.x.:..:.:..............x........ 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 108657523 81557032 +3102 chr4 + 190214555 164864315 164864314 164864441 127 AAGAAGAAGAAGAAGAAGAAGACGA-AGA--------AGAAGAAGAAGAA---------GAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGA chr4 - 94230402 59322085 59322084 59322229 34908174 34908173 34908318 145 AAGAACAGTTAGAAGAAAATAACAATAGACTTATTACAGTGGATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA .....x.:xx.......:.x:..:.-...--------..x:..x......---------:.xx....:.....x..x..x..:x.x.xx.:x..xx..........:.x:.....:........::x...xx.....::x..x.. 25M1I3M8I13M9I86M 87/127 68.5% 145/94230402 0.0% 18/127 14.2% 105542230 84672325 +3105 chr4 + 190214555 164864363 164864362 164864444 82 AAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx.:..:.....:.x:..............::x...xx.....::x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 105542215 84672340 +3256 chr4 + 190214555 164864369 164864368 164864450 82 AAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ....:.....x..x..x...x.x.xx.:x..xx....:.....:.x...:...........::x...xx.....::x..x.. 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 105542221 84672334 +3125 chr4 + 190214555 164864381 164864380 164864462 82 AAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ..........x..x..x...x.x.xx.:x..xx.:.....:....x...:...........::x:..xx.:...::x..x.. 82M 56/82 68.3% 82/94230402 0.0% 0/82 0.0% 105542233 84672322 +3003 chr4 + 190214555 164864387 164864386 164864468 82 AAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA ..........x..x..x...x.x.xx.:x..xx.:.....:....x...:........:..::x:..xx.:...::x..x.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 105542239 84672316 +3014 chr4 + 190214555 164864396 164864395 164864477 82 AGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGA chr4 - 94230402 59322148 59322147 59322229 34908174 34908173 34908255 82 AAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAAATGGACCAGGAGAGCGATGA .:..:.....x..x..x..:x.x.xx.:x..xx.:.....:....x.........:......:x...xx....:::x..x.. 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 105542248 84672307 +3140 chr4 + 190214555 164873289 164873288 164873376 88 TAGGAAGGAAGGAAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGAAAGGAAGGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 76099076 76099075 76099163 18131240 18131239 18131327 88 TAGAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGA ...::.:::..:.::..x.:.:.xx:.........x..:.:.......::.::xxx::.:...x......::.:...x...::..x.. 88M 53/88 60.2% 88/94230402 0.0% 0/88 0.0% 88774213 NA +3263 chr4 + 190214555 164873298 164873297 164873380 83 AGGAAGGGAGGGAGAGAGGG--AGGGAGGGAGGGAGAAAGGAAGGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 76099079 76099078 76099163 18131240 18131239 18131324 85 AGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGA ..:...:..:.::.x.....--:.........x..::...:....::..:xxx::.:...x......::.:...x...::..x.. 20M2I63M 55/83 66.3% 85/94230402 0.0% 2/83 2.4% 88774219 NA +3110 chr4 + 190214555 164873305 164873304 164873388 84 GAGGGAGAGAGGGAGGGAGGG--AGGGAGAAAGGAAGGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA chr4 - 94230402 76099078 76099077 76099163 18131240 18131239 18131325 86 GAGAAAGAGAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGA ...::.....:.::.x.....--:.....::..x:.:......:.::...:xxx::.:...x......::.:...x...::..x.. 21M2I63M 54/84 64.3% 86/94230402 0.0% 2/84 2.4% 88774227 NA +3282 chr4 + 190214555 164878134 164878133 164878231 98 TGAAAAAAAAAAGAAAGAAAAGAGAGAAAAGAAGAGAGAAAGAAAGAAAGAAAGAAACAGAAAAAAGAAAGAAAGAAAGAAAGAAAGA-AATTAGAAAG chr4 - 94230402 41730408 41730407 41730506 52499897 52499896 52499995 99 TAAAGATACCAGGAAAGAATCCAGGAAACAAAACAAACAAACAAACAAAATCAGAAACAGATAAAGGAGAAAAAGACGGCAAGGAGGACAATTGGGAAG .:..:.x.xx.:.......xxx..::..x.:..x.:.x...x...x...:xx.........x...:..:.:.....x:.x...:.:..-....:.:... 88M1I10M 66/98 67.3% 99/94230402 0.0% 1/98 1.0% 123147726 67066829 +4452 chr4 + 190214555 164883996 164883995 164884173 178 AAAGAAGACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGA----AGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAA chr4 - 94230402 21758891 21758890 21759061 72471342 72471341 72471512 171 AAAGGAGTCAGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGA-----------AAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ....:..x.......:....:..x:.:.:......:....----.:x:.x...x.x:x...x..:..x::...x.x.x.:x..x.:.....x.x.:xx..::...:.....-----------.......:..:.:...::x..:x......xxx....::...xxx:x:...::.:...x.. 40M4I67M11D60M 107/167 64.1% 171/94230402 0.0% 15/167 9.0% 143125105 47089450 +3135 chr4 + 190214555 164883999 164883998 164884087 89 GAAGACAGAAAGAGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAA chr4 - 94230402 25361665 25361664 25361753 68868650 68868649 68868738 89 GAAGAAAGTAAGAAGGGACTGAAAAGTGGAGAAGGAAAGAAAGAGGGAAAAATCCTAACTTTGAAAAAACAACAGAGGGAGAGAGGGGA .....x..x....::...xx::..::x:.......:......:.:.....:.xxxx...xxx....:..x:.x...::..:...:..:. 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 139522334 50692221 +3004 chr4 + 190214555 164884011 164884010 164884091 81 AGAGGAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAA chr4 - 94230402 7739259 7739258 7739339 86491064 86491063 86491144 81 AGAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGGGGAATTTTGAAAAAAAAAAAAAAAAAA .....:.:.:.x::.:.:.::...:.:......:......:.:..xxx:...::.:.:xxxx....:...:..::...... 81M 50/81 61.7% 81/94230402 0.0% 0/81 0.0% 157144752 33069803 +3209 chr4 + 190214555 164884015 164884014 164884120 106 GAAGAGAAGAAAGAGAAGGGAAGAAAAAAGGAAAGAAAGAAACAGGGAAAGAAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAA chr4 - 94230402 1169703 1169702 1169808 93060595 93060594 93060700 106 GAAAAAAAGGCAGAAAAGGAAGAAAAAGGGGACTCAGATCCATGAGGAAGGAAGGGGTAAAACAAGAAAAGGTAGCCAGAGGGAAGCAATAGAAAAGAGAAGTGAA ...:.:...:x...:....:.::....::...xxx.:.xxx.:::....:.....:.x:...x..::..:.:x.:xx...::...:x...::..:.:....:x:.. 106M 62/106 58.5% 106/94230402 0.0% 0/106 0.0% 163714312 26500243 +3628 chr4 + 190214555 164884066 164884065 164884200 135 AAGGAGAGAAAGAAAGAAGGAAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAG-AGAAGAAAGAAACAAAGAGAGA chr4 - 94230402 30258261 30258260 30258396 63972007 63972006 63972142 136 AAAGAGACAAAAATTGAATGAACAAAAGAGAGAAAGAGAAACATTGAGAACTGAATGTGAAGAATTAAATACAGGGTAAATAAAGAAGAGGAAAACAATGAGAAGGAAAAGGGTAAAAGTAATAAACATATGGAAA ..:....x...:.xx...x...x......:.......:x:.x.xx:....xx:..x:x:.....xx...x.x..::x:..x:..::.:..:..::x:.x.....:....:.:.-.:...x..x.....x.x:..:. 113M1I22M 84/135 62.2% 136/94230402 0.0% 1/135 0.7% 134625805 55588750 +3574 chr4 + 190214555 164884086 164884085 164884221 136 AAAAAAAGAAAGAAAGAATGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAACAAAGAGAGAGGGAAAGAAGAAAGAAAAAGA chr4 - 94230402 30258261 30258260 30258386 63972017 63972016 63972142 126 AAAGAGACAAAAATTGAATGAACAAAAGAGAGAAAGAGAAACATTGAGAACTGAATGTGAAGAATTAAATACAGG----------GTAAATAAAGAAGAGGAAAACAATGAGAAGGAAAAGGGTAAAAGTAATAAA ...:.:.x...:.xx.......x:.....:...........x.xx..:.:xx::.x:x:.....xx...x.x...----------.x..:x.:......:::......x....::.::..:.:x:....x..x.:. 75M10D51M 81/126 64.3% 126/94230402 0.0% 10/126 7.9% 134625825 55588730 +3015 chr4 + 190214555 164884109 164884108 164884190 82 GAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAA chr4 - 94230402 36858293 36858292 36858374 57372029 57372028 57372110 82 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA ..:.:.x..xx.:x.....x...::...:.........:.x..x.:xx..:.:..::..:.:..x...::x:.::....... 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 128025816 62188739 +3111 chr4 + 190214555 164884110 164884109 164884237 128 AAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAACAAAGAGAGAGGGAAAGAAGAAAGAAAAAGAGGAAGGAAGAGAAGGA chr4 - 94230402 61334684 61334683 61334805 32895598 32895597 32895719 122 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAG--AGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATG----ATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ..:....x.x:x::.xx......:.....x......x.:x..--.......x..:....x:xx:.x:::.xx..x.::...:.x.....:x.----.x.:....:..x.:..:...:..:....x:.. 42M2D48M4D32M 78/122 63.9% 122/94230402 0.0% 6/122 4.9% 103549426 86665129 +3684 chr4 + 190214555 164884118 164884117 164884259 142 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAACAAAGAGAGAGGGAAAGAAGAAAGAAAAAGAGGAAGGAAGAGAAGGAAAGAAAGAAGAGTTCCACCATT chr4 - 94230402 30533164 30533163 30533305 63697098 63697097 63697239 142 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCACATT ...x.:....:..........::.:.::...:.:.:.xx:x.:.:...x:..:.xxx::::x:....xx....:.:.:::.x::.....:..::.::...x.xx....:.:....:.:x....xxx.x:....x.:xx.... 142M 81/142 57.0% 142/94230402 0.0% 0/142 0.0% 134350954 55863601 +3443 chr4 + 190214555 164884142 164884141 164884225 84 AGAAAGAAAGAAAGAAAGGAGAAGAGAAAGAAAGGAGAGAAGAAAGAAACAAAGAGAGAGGGAAAGAAGAAAGAAAAAGAGGAA chr4 - 94230402 40465777 40465776 40465860 53764543 53764542 53764626 84 AGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAA ....:.:.x..x.::..x.....:..:x...:.:.x:..::....x:::::x:...:..........:.....:.:.:.:.:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 124418365 65796190 +3423 chr4 + 190214555 164885206 164885205 164885275 70 CTGCAGCCTCCGCCTTTTGGGCTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGCATTACAGGT chr4 - 94230402 18197126 18197125 18197195 76033208 76033207 76033277 70 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGT ..:.....:xx:x...:....:.....::x...x.xx.x........:............x.:....x.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 146688080 43526475 +3320 chr4 + 190214555 164886901 164886900 164886972 72 CTGCACCCTCCACCTCCCAGGTTCAAGCAGTTCTCCTGGCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..x..:xx.x..:.::........::x...x.xx..........::...........:.:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 146689775 43524780 +3104 chr4 + 190214555 164899585 164899584 164899686 102 GTCAAGAAAGAGAAAGAAAGAAAGAAAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAGAAA chr4 - 94230402 13634179 13634178 13634280 80596123 80596122 80596224 102 GTGAAGAAAGAGATAAAAAGAAAGAGAGAGGGAAGGGCTCACTGGAGTAGAGATAGCACTAGGGAAAAAATTAGAAGTTGTGTGTGGAAAAAAATGAAGGAA ..x..........x.:.........:....:..:..:xxx.xx.::.x.....x..x:xx..:..:.:.:xx...::xx.x.x.x.:...:...x:...:.. 102M 64/102 62.7% 102/94230402 0.0% 0/102 0.0% 151265406 38949149 +3605 chr4 + 190214555 164899588 164899587 164899705 118 AAGAAAGAGAAAGAAAGAAAGAAAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-AGAGAGAGAAAAGAAAGAAAGAA---AGAAAAAGAAAGAAAGAAAG chr4 - 94230402 30533165 30533164 30533286 63697117 63697116 63697238 122 AATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ..x...:..:..........::.:.:.....::..:xx.x..:::..x:.::.xxx:...x.:...xx..:.x..-...:x...:...:.....:.:..---x.:...:..:..:..x.... 75M1I23M3I20M 76/118 64.4% 122/94230402 0.0% 4/118 3.4% 134366423 55848132 +3575 chr4 + 190214555 164899591 164899590 164899722 132 AAAGAGAAAGAAAGAAAGAAAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAGA-AAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAA----------AAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:.........----------.:.::.....:..:...xx.x..:.:..x:.::.xxx:...x.:...xx....x::.....x..-:.:.......:.:..x:xx:....:..:..:..x.... 20M10D64M1I38M 80/122 65.6% 123/94230402 0.0% 11/122 9.0% 134366427 55848128 +3016 chr4 + 190214555 164899627 164899626 164899695 69 GGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGAAAGAAAGAAAGAAAAAGAA chr4 - 94230402 71899286 71899285 71899354 22331049 22331048 22331117 69 GGTAGGACATGGAGGGAGAGATGGCGAGGAGATGAAAAAGAAAGAAAATAGAAAAAGAGGGAAAAAAAA ..x:...x.x:...:......x:.x...::::x..:.:...:......x.:.:.....::......:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 93000341 NA +3184 chr4 + 190214555 164899665 164899664 164899779 115 AGAGAGAAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAAAGAAGGAAAGGAAGAGGGAAAG-----AAAAGAAAAATAG chr4 - 94230402 72111981 72111980 72112100 22118303 22118302 22118422 120 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAG .....::..:.:.::.x.:...::.:...:x.x...:x..x..x.x.x:.x....x.:::.:.::.:x:.xx...x......x:.....x.:....:....:-----:........:x.. 102M5I13M 71/115 61.7% 120/94230402 0.0% 5/115 4.3% 92787684 NA +3240 chr4 + 190214555 164906694 164906693 164906754 61 AATTTTTTTCTTTTTTAAAAATTTTTTGTTTATTTAAATATATATTATATATATATATATA chr4 - 94230402 64440758 64440757 64440818 29789585 29789584 29789645 61 AACTTCTTGTTTCTCTAAAAATTTTACATTTACATAAATACATACTTTATATATGTGTATA ..:..:..x:..:.:..........x::....:x......:...:.x.......:.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 100465936 89748619 +3285 chr4 + 190214555 164909089 164909088 164909150 62 TCCGTCTCAAAAAAAAAACCAAAACAAAACAAAAACAACAACAACAAAAAAAACAAAAGCAG chr4 - 94230402 70931650 70931649 70931711 23298692 23298691 23298753 62 TTCAACTTTAAAAAGAGAACAAAACAAAACAACAACAACAAAAACTAAAAAAGTAAAAAAAG .:.:x..:x.....:.:.x.............x........x...x......::....:x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 93977439 NA +3001 chr4 + 190214555 164914428 164914427 164914471 44 CAACGTGTTTTTTTGTTTGTTTGTTTTTGTTTTTTTTTAAGACG chr4 - 94230402 48899519 48899518 48899562 45330841 45330840 45330884 44 CAGGGGGTTTTTTTGTTTGTTTGTTTTTGTTTTTTTTAACGATG ..:x.x...............................x.x..:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 116014909 74199646 +3149 chr4 + 190214555 164914429 164914428 164914500 72 AACGTGTTTTTTTGTTTGTTTGTTTTTGTTTTTTTTT----AAGACGGAGTTTTGCTCTG-----TCGAACAATCTTGGCT chr4 - 94230402 13919554 13919553 13919634 80310769 80310768 80310849 81 AACGTTTCTTTTTGTTTGTTTGTTTTTGTTTTTTTTTGCACAAGAATAAATTGTTTTCTGATAATTTGGGTACTCCTGGTT .....x.:.............................----....xx:.:..x.x:....-----.:.:::.x..:...:. 37M4I19M5I16M 56/72 77.8% 81/94230402 0.0% 9/72 12.5% 150994875 39219680 +3607 chr4 + 190214555 164922107 164922106 164922179 73 CTGCAGCCTCTGCCTCCTGGGTTCAAGCAATTCTCGCACCTCAGCCTCCCAAGTAGCTGGAATTACAGACGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:.....:xx:x..:...........::x...x.:x:x........::.............:....x::... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 146724981 43489574 +3627 chr4 + 190214555 164934845 164934844 164935248 404 CTTCCTCCAGTTTTTTTGTTTTGTTTTGTTTTGGTGCTTTTTTTTTTGTCCTCTCCTTGAATCTAGAATTTGGTGTTATTTTTCTTTCTCTTTCTTCCCCATCTCCCTGACTTTTCATGTCTATTGTTTTTTATTCTTTTTTTTTTTTGGTAAACGTGCAATATACTTTAGGGGCTGTTCCTTTTCATGTTATTATGTTTTGAAGTTTCTGACTCCAGAAAACCTTCTATTAGTACCATCACAGTTCTATGGGCACTGGAGGGTTACAGAGTTTA-----GGAACCCTGGT-TGTAAGTTTGGTTGAAATTGA--CCACTTCGGTGAGCCACAGGGGTCACTGGTTTCTCCCCA------------TAATTCTTTTTCTTTTTCTTTTTCTTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4657799 4657798 4658137 89572266 89572265 89572604 339 CTTTCTCC--TCCTTTCCctttatttccttttcttgtccttttcttccttctttctct--------------------tttctttctttctttcattccc------------tttcatttctttcttttttt--tctttctctttttcAGTG---------------TTGGATGTCGTGTTCATTGATTTCAATAATTACTGTAGCCTCC---------ATACCTGCATTCTTTCCCGTTA-------------ATTGAAGGGTT---TATTTTAAACTGGGTACTTTAATATGTATGTCTTGATTAAACTAAATTCCCTTATTTGAT---------TTGATTGCCTCCCTCCAACTTCAGATTTTTAATCATTTTTATTGTGCCTTTACTGTTCTCTCTCTCTCTTTTTTTTTTTTTTCTGTT ...:....--.::...:x:...:...:x....xx..:::....:..:x.:..:..::.--------------------...:.:.:.:......x.:...------------......x...x.:x......--.....:.:.....::..:---------------..:.:x.::..x:::x..x..x.:.x..xx.x:..x..::..:---------.x....x.xx.:xx.x..:.:.-------------.:..:......---x.x....-----..x..::.::.-....x..:.x.x.x...:.:.--:.x...xxx...x---------.::x.x.::..:.:...------------....:x.....x..x.x.:...x..x....:...:..................:.x.. 8M2D48M20D22M12D20M2D18M15D43M9D22M13D11M3D7M5I11M1I21M2I13M9D17M12I58M 209/319 65.5% 339/94230402 0.0% 105/319 32.9% 160277046 29937509 +3211 chr4 + 190214555 164935195 164935194 164935263 69 TCTTTTTCTTTTTCTTTTTCTTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTTGAAACAAAGTCA chr4 - 94230402 80509963 80509962 80510031 13720372 13720371 13720440 69 TCTTTTTTTCTCTCTTTTTCCTTTTTCCCTCTCTCAAACAACTTTCGTTTTTCTTTAGAAACAAAGGCA .......:.:.:........:...:.::..:....xxx:xx:...:x.....:...x.........x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 84425232 NA +3181 chr4 + 190214555 164961132 164961131 164961203 72 CAGAAAATAAGAACTCTCAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAA chr4 - 94230402 7711333 7711332 7711404 86518999 86518998 86519070 72 CAGAAAATTAGGGGCTAAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGA ........x..::x::xx.:...:.....:...........:......xx:...x..:.:.:.:.:.:..:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 157249799 32964756 +3077 chr4 + 190214555 164961135 164961134 164961217 83 AAAATAAGAACTCTCAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAATAACAATAATTGAT chr4 - 94230402 16882692 16882691 16882774 77347629 77347628 77347711 83 AAAAGATGACCTACCAAGTAGAATTTACAAACAAGTTAAAAAAAAAAAAAAAAGACAAAGAAAATAGAGTAGGAGTAACTGGT ....x.x..x..x:..:.:.:..xxx.x...x..:xx................:.x.......:x.:.:..:x.:...:..:. 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 148078443 42136112 +3024 chr4 + 190214555 164961147 164961146 164961210 64 CTCAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAATAACAAT chr4 - 94230402 58307446 58307445 58307509 35922894 35922893 35922957 64 CTCAGGGAAAAAAAAAAAAAGGGGGGAAATATAAAAAGGGGGAAAAAAAAAGGAAAAGACCTAT ......x.............::::::...x.x.....:::::.....:....:....x.x.x.. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 106653701 83560854 +3208 chr4 + 190214555 164968133 164968132 164968200 68 ACGAAAAAAGGGGAGGGGAGGGGAGAAGAGGAAAAAGAAAAGAAAAGAAAAAGAAAAGAGGCTGTATT chr4 - 94230402 25508116 25508115 25508183 68722220 68722219 68722287 68 ACTAAAGGGGGGGGGAGGGGGGGAGAAGAAAAAAAAAAAAAGATAGCAAGTAGCAATGAATCAGTATT ..x...:::....:.:..:..........::.....:......x.:x..:x..x..x..:x.x..... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 139460017 50754538 +3038 chr4 + 190214555 164968138 164968137 164968190 53 AAAAGGGGAGGGGAGGGGAGAAGAGGAAAAAGAAAAGAAAAGAAAAAGAAAAG chr4 - 94230402 44393358 44393357 44393410 49836993 49836992 49837045 53 AGGATGGGAGGGATGGAGGGGAGAGGCAAAAGGAAAGAAAAGAAAAACAGGAG .::.x.......:x..:.:.:.....x.....:..............x.::.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 120574780 69639775 +3088 chr4 + 190214555 164995396 164995395 164995453 58 CCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAGCCTGAAGTATATATAGTGATATA chr4 - 94230402 58890727 58890726 58890784 35339619 35339618 35339676 58 CTGTGTTGAAAAAAAAAAAAAAAGACAGAAAAGAACATGAAATATATAGTATAATATA .:..x.x:...............:.x.:......:.x....:......xx:.:..... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 106104669 84109886 +3341 chr4 + 190214555 165047897 165047896 165047982 86 AAACAAACAAACAAACAACAACAAAAAAAACACTCAGGACACCT------AGTAAAATGGCTCTTGCAGTGTCTGTCCTGTGACTAGATTTA chr4 - 94230402 6701297 6701296 6701387 87529016 87529015 87529106 91 AAACAAATAAACAAACAACAACAAAAAAAACCCTAAGGATATCTGCTTGCAATGCAATGGGATTTGTTTTG-CTCTTCTTTGGGTACATTCA .......:.......................x..x....:.:..------.:.:x.....xx:...:xx..-..x.:..x..:x..x...:. 44M6I21M1D20M 64/85 75.3% 91/94230402 0.0% 7/85 8.2% 158346600 31867955 +3340 chr4 + 190214555 165049193 165049192 165049259 67 AGAATGAAAC---TCCAACTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAGA---AAAAGGAAGGAAGGAAGGA chr4 - 94230402 44177675 44177674 44177747 50052656 50052655 50052728 73 AGAATGGAATATTTCCAACTTAAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATGA ......:..:---.......:...............::.....:.x...:.---..:....:.::...:.x.. 10M3I38M3I19M 53/67 79.1% 73/94230402 0.0% 6/67 9.0% 120871518 69343037 +3044 chr4 + 190214555 165054168 165054167 165054239 72 CTACAACCTCTGCCTCCTGGGGTCAAGCAATTCTCCTGCCTGTGCCTTCCAAGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:..:xx:x..:.....x.....::x...x.xx.x..xx.....:.............:....x.::. 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 146857042 43357513 +3094 chr4 + 190214555 165061788 165061787 165061839 52 AAAGTTAATTTATATATATGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 15949056 15949055 15949107 78281296 78281295 78281347 52 AAAGGCAATTTATATATATATATGTGTGTGTGTGTATTAATACACCCATATA ....x:.............:.:...........:...xx...:.:x:..... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 149112732 41101823 +3151 chr4 + 190214555 165061788 165061787 165061885 98 AAAGTTAATTTATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681900 56681899 56681997 37548406 37548405 37548503 98 AATGTAAATTTATATATACAATGTTTTTCACATATAATTTTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTT ..x..x............::xxxx.x.x::::....xx.x.x:......x:.:....x:.:...:....:..xx.......x...x...x....x... 98M 65/98 66.3% 98/94230402 0.0% 0/98 0.0% 108379888 81834667 +3459 chr4 + 190214555 165061789 165061788 165061828 40 AAGTTAATTTATATATATGTGTGTGTGTGTGTATATATAT chr4 - 94230402 26564532 26564531 26564571 67665832 67665831 67665871 40 AAGTTAATTTATATATATGTGTGTGTGTGTATGTATATAT ..............................:.:....... 40M 38/40 95.0% 40/94230402 0.0% 0/40 0.0% 138497257 51717298 +3034 chr4 + 190214555 165061793 165061792 165061857 65 TAATTTATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATA chr4 - 94230402 35554953 35554952 35555017 58675386 58675385 58675450 65 TAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA ..:x:..x......x..x.........:.:....:x:.:.........::...:.x.x..:.:.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 129506840 60707715 +3197 chr4 + 190214555 165061794 165061793 165061872 79 AATTTATATATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681906 8681905 8681983 85548420 85548419 85548497 78 AACTAAAATGGATATCCATGTCTG-ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..:.x.x..:x..:.x::...x..-:....x..........:...::.:.:.:...:.....xx.x............. 24M1D54M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 156379888 33834667 +3068 chr4 + 190214555 165061824 165061823 165061879 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 72326476 NA +3522 chr4 + 190214555 165061826 165061825 165061889 64 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTAAAT chr4 - 94230402 92735348 92735347 92735411 1494992 1494991 1495055 64 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAAT .::....x.....:...:..:.:..........x....:.x.........:.x...:::.:... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 72326478 NA +3496 chr4 + 190214555 165061828 165061827 165061883 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 72326480 NA +3282 chr4 + 190214555 165061830 165061829 165061885 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 72326482 NA +3158 chr4 + 190214555 165061832 165061831 165061889 58 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTAAAT chr4 - 94230402 4200274 4200273 4200331 90030072 90030071 90030129 58 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAGT ..x............:.:.:..............::...:xxx.......x...x.:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 160861558 29352997 +3584 chr4 + 190214555 165062437 165062436 165062508 72 CTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.:.........:.x...x.xx.x.........:...........:.:....x.:.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 146865311 43349244 +3022 chr4 + 190214555 165063418 165063417 165063469 52 ATATATACATGTGTATATACATATATATGTATATACACACACACACATATAT chr4 - 94230402 25393259 25393258 25393310 68837093 68837092 68837144 52 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGT ..:.:.:.........:..::...x.:...:..:..........:..:.::. 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 139670159 50544396 +3178 chr4 + 190214555 165063429 165063428 165063502 74 TGTATATACATATATATGTATATACACACACACACATATATATATATACATATACAC-----TTTTTTCTTTTTTTTTT chr4 - 94230402 7596414 7596413 7596492 86633911 86633910 86633989 79 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGTCTTTT .::.x..:....:.x..............:..:::...:.x.:......x..::...-----:.:x......x.:.... 57M5I17M 53/74 71.6% 79/94230402 0.0% 5/74 6.8% 157467015 32747540 +3058 chr4 + 190214555 165063445 165063444 165063499 55 TGTATATACACACACACACATATATATATATACATATACACTTTTTTCTTTTTTT chr4 - 94230402 33661790 33661789 33661844 60568559 60568558 60568613 55 TATACACATACACACACACAGAGATATATATGTATAACCACTGTTTTTCTTTTTT .:..:.:.:...........x.x........::...xx....x....::...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 131401655 58812900 +4087 chr4 + 190214555 165084256 165084255 165084356 101 TGGCGCCATCTTGGCTCACTGCAACCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTATGCGCCACTGTG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ....::...x..------..:..:..:xx:x..:.:.........:.x...x.xx.x........:............:.:....x.--...:........ 12M6D69M2D12M 70/93 75.3% 93/94230402 0.0% 8/93 8.6% 146887142 43327413 +3320 chr4 + 190214555 165089035 165089034 165089094 60 TACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAATGAAAGACCCAGAGAAAA chr4 - 94230402 21758982 21758981 21759041 72471362 72471361 72471421 60 TGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAA .:.x..x..:........:....:.....::.....:.x...::.:.:.......::... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 143330053 46884502 +3021 chr4 + 190214555 165097485 165097484 165097556 72 CTCCATCTCAAAAAAAAAAAAAAAAAGAAAAAAGAAAATGCACTAACAGAACAGAAGAAAAATAAAAGTTAA chr4 - 94230402 64294991 64294990 64295062 29935341 29935340 29935412 72 CTCCATTTGTAAAAAAAAAAAAAAAGCAAAAGAGAAAGCAAACTAAAACTACTCTGAAAAAGCAAAGGCTAA ......:.xx...............:x....:.....:::x.....x.xx..xxx::....::...:.:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 100802494 89412061 +3498 chr4 + 190214555 165107100 165107099 165107176 77 CTGCAACCTCTGCTTCCTGGGTTCAAACAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAAGTGCCCGAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..:..:..:xx:x:.:..........:::x...x.xx.x........::.............:....x....x.x.. 77M 54/77 70.1% 77/94230402 0.0% 0/77 0.0% 146909974 43304581 +3201 chr4 + 190214555 165121701 165121700 165121802 102 AGAGCTAGAATCCATCAAAAAAAGAAAGAAAGAAAAGAAGAAAGAAAGAGAGAAAG--AGAGAAAGAGAGGAAAGGAAAGGAAAAAGA----AAAAGAAAAAAAAAGA chr4 - 94230402 56098441 56098440 56098548 38131855 38131854 38131962 108 AGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAGAATTCAAAAGGAAATTAATGA ......:.:.....xxx.:..:::.x...:..xx..:...x.:...::.:.:....--.:..x.....:..::.::....xx..:...----.....:...xx..x.. 56M2I30M4I16M 68/102 66.7% 108/94230402 0.0% 6/102 5.9% 109023260 81191295 +3289 chr4 + 190214555 165121714 165121713 165121777 64 ATCAAAAAAAGAAAGAAAGAAAAGAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGGAAAGGAAA chr4 - 94230402 57306053 57306052 57306116 36924287 36924286 36924350 64 ATTAAATAAACAGAGGAGAAAGAGGAGGAGGAAAAAAATAAAGAGACAAAGACAGGAAAGCAAA ..:...x...x.:..:.::..:..:..:.:....:.:.x.......x.....x.......x... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 107815661 82398894 +3023 chr4 + 190214555 165121968 165121967 165122053 86 ATTTGGCAATAGTTTCTTAAATATGACACCAAAAGAACAGACCAAAAAAAAAAAATAAGTAAATTGGACTTAATTAAAA---TTAAAAG chr4 - 94230402 72073526 72073525 72073614 22156789 22156788 22156877 89 ATGTGGCAATAGTGTGTCAAAGGTGACTTTAAAAGAACAAACAAACAAAAAAAAAAACCTTGCTTCAGTCTTGTTAAAAATTCTAAAAG ..x..........x.x.:...x:....x::.........:..x..x.........x.xx.x:x..x::::.x:......---:...... 79M3I7M 60/86 69.8% 89/94230402 0.0% 3/86 3.5% 93048442 NA +3302 chr4 + 190214555 165143512 165143511 165143595 84 CTGCAACCTCTGCCTCCCAAGTTCAAGTGATTCTTCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACATGCCACCACGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTGT ..:..:..:xx:x..:.:::.........x...x:xx.x........:............:.:....x.::..--....:::.. 73M2D9M 56/82 68.3% 82/94230402 0.0% 2/82 2.4% 146946386 43268169 +3085 chr4 + 190214555 165160036 165160035 165160129 94 TTCAGTTCAATG---TGTTTCAATCTTTTCCGTGTAGTTCTGACTACTGTTTTTGTTTGTTTGTTTGTTTGTTTTTTTGTTTTTTTTTAAGATGGAG chr4 - 94230402 67798805 67798804 67798891 26431512 26431511 26431598 87 TCCAGTTTGATGAAATGTTTAGAT----GCAGTATGGTTTTG------GAGTTTTTCTGTTTGTTTGTTTGTTTTCTGGTTTTTTTTTGGAAAGGAG .:.....::...---.....x:..----x.x..:.:...:..------.xx...x.:..................:.x..........:::.x.... 12M3I9M4D14M6D49M 64/84 76.2% 87/94230402 0.0% 13/84 15.5% 97361231 92853324 +3623 chr4 + 190214555 165161504 165161503 165161586 83 CTGCAGCCTCCACCTCCCGGGTTCAAGAGATTCTCTCACCTCAGCCTCTCAAGTAGCTGGGATTATAGGTGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.....:xx.x..:.:.........x.x...x.xx:x........:............:.:..:.x....--:....::.. 72M2D9M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 146964378 43250177 +3108 chr4 + 190214555 165241969 165241968 165242030 62 GTTTCCTAGCTTTTTGTGTGTTTGTTGCTGCTGTTGTTTTTTTGTTTGTTTAGGTTTTTAAA chr4 - 94230402 72653524 72653523 72653585 21576818 21576817 21576879 62 GTTTTGTGGCTTTTTGATTTTTTTTAACTATTGTAGTTTTTTTGTTTGTTTATGTCTTAAAA ....:x.:........xx.x...x.x:..::...x.................x..:..x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 92588445 NA +3737 chr4 + 190214555 165259178 165259177 165259260 83 CTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........::x...x.xxxx........:............:.:....--:.........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 147062052 43152503 +3124 chr4 + 190214555 165264611 165264610 165264702 92 CACACACGTACGTATATACACGTATATATGTACACACATGTATATACATATATGTCTACATACGTATATGTATGTGTGTGTGTGTGTGTGTG chr4 - 94230402 71630131 71630130 71630222 22600181 22600180 22600272 92 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG ...x:....:.:.::...:..::.:.:.x:..:...:..x.x.:..:::..:...:.:...::.x......:...x.x:x..x:.x.x.... 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 93634480 NA +3114 chr4 + 190214555 165264671 165264670 165264731 61 TACGTATATGTATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .::...:x.:..::..x....x.....::...:.......:.......:.x......x:.. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 132305103 57909452 +3140 chr4 + 190214555 165264681 165264680 165264739 59 TATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATAT chr4 - 94230402 19559286 19559285 19559343 74671060 74671059 74671117 58 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATAT ...x.x.x.x................................xx..-..x.x.:..... 46M1D12M 49/58 84.5% 58/94230402 0.0% 1/58 1.7% 145705395 44509160 +3136 chr4 + 190214555 165264682 165264681 165264722 41 ATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATACA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..........x.x.........:.............:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 75443401 NA +3179 chr4 + 190214555 165264687 165264686 165264768 82 TGTGTGTGTGTGTGTGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATATATATATATAAA chr4 - 94230402 81401294 81401293 81401375 12829028 12829027 12829109 82 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAA .:.x.x.....x.....x..x.x.......:...x:x:..:..:..x:.:.:...:....x..:.x:....:x..:..:... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 83863393 NA +3513 chr4 + 190214555 165264701 165264700 165264774 74 TGTGTATATATATATATATACATATATATATATATATATGTATATATATATATATAT-------ATATATATAAAACATTA chr4 - 94230402 37363040 37363039 37363120 56867283 56867282 56867363 81 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACAATATGTATAAAATATTA ......:...:x.:.........::.:.x......xx:.......:.:...:...x:-------....:.......:.... 57M7I17M 56/74 75.7% 81/94230402 0.0% 7/74 9.5% 127901661 62312894 +3427 chr4 + 190214555 165303638 165303637 165303720 83 CTGCAACCTCTGCCTCCCAGGTTCAAGAGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGCACTATCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::........x.x...x..x.x........::...........:.:....--.::....:.:::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 147106512 43108043 +3951 chr4 + 190214555 165303951 165303950 165304033 83 CTGCAACTTCCACCTCCTGGGTTCAAGTGATTCCCATGCCTCAGCTTCCCCAGTAGCTGGGATTACAGGTGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:.::xx.x..:.............x...x..x.x......:.::.x.........:.:....--:.........::.. 67M2D14M 60/81 74.1% 81/94230402 0.0% 2/81 2.5% 147106825 43107730 +3019 chr4 + 190214555 165307299 165307298 165307342 44 CTCCGTCTCAAAAAACAAACAAACAAACAAAAAAACAAAAAAAC chr4 - 94230402 64558411 64558410 64558454 29671949 29671948 29671992 44 CTCCCCCCCAAAAAACAAACAAACAAACAAAAAAAAACCAAAAC ....x:.:...........................x.xx..... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 100748888 89465667 +3474 chr4 + 190214555 165338181 165338180 165338353 173 ATACATGTATAAGTGCTTATGTTGA-------CAAAAATATATTACATTTTAATTTTAAAATGAATGAAATATATGAGAATCATTTATGAGGTTTATAGAAATTGTGTTTACATGAACAAAAATATGTATGTGTATATATATATATATATATATATA--CACACATATATATATACACACAC chr4 - 94230402 14964730 14964729 14964884 79265519 79265518 79265673 155 ATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATG-----CATTTGTACACTCAAAAAGGCAAAGTG---------CATTTAT-------ATAGAG---GTGTT---GTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x........:.:.xx:..:...-------..:....:-----.....xx.:x:.x...x:::::..:.:---------.......-------.....:---.....---:..:...x........x..:..:.::.:.::.:...:......:.--......:..::.:.:........ 25M7I8M5D27M9D7M7D6M3D5M3D45M2I23M 103/146 70.5% 155/94230402 0.0% 36/146 24.7% 150373451 39841104 +3718 chr4 + 190214555 165339180 165339179 165339265 86 CTGCAACCTTCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTTTCAGGTAGCTGGGATTACAGGCATGCGTCACCACGCGT chr4 - 94230402 18197126 18197125 18197209 76033194 76033193 76033277 84 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTAT ..:..:..:xx.x..:...........::x...x.xx.x............:........:.:....--.:...::...:::.::. 67M2D17M 59/84 70.2% 84/94230402 0.0% 2/84 2.4% 147142054 43072501 +3523 chr4 + 190214555 165350508 165350507 165350595 88 CATGATCT-CAGCTCACTGCAACCTGGGTTCAAGCGATCCTCCTGCCTCAGCCTCTCGAGTAGCTGGGGCTACAGGCATGCACCACCAT chr4 - 94230402 18197120 18197119 18197205 76033198 76033197 76033283 86 CATGTTCTACAGCCCAAAGCT-TCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ....x...-....:..xx..x-:...........:.x.:.x.xx.x........:..:.........::.....--.:........::. 8M1I12M1D52M2D13M 65/85 76.5% 86/94230402 0.0% 4/85 4.7% 147153388 43061167 +3057 chr4 + 190214555 165357005 165357004 165357044 40 AGTTTATTTTTACCTTTTTTTTTTTTTTTTTTTTTTGAGA chr4 - 94230402 78867831 78867830 78867870 15362533 15362532 15362572 40 AGTTTATTTTCACTTTTTTTTCTTTTTTTTTTTTCTGAAA ..........:..:.......:............:...:. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 86489174 NA +4314 chr4 + 190214555 165412444 165412443 165412564 121 AAACAGGGATTATTTTATTAAGTCCTCTCAATAAAGCCTATGAATCAGTTA-CTATTATTATCTCGATTTTACAGATTAGGAAACTGAGGCACAGAGGAGTTGTGTTACTTGCTCAGAGTTT chr4 - 94230402 10729148 10729147 10729263 83501140 83501139 83501255 116 AAACAGGAATTGATTTAG-----CCTCACAATACC-CCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCT .......:...:x....x-----....x.....xx-...:...:x:..x..-:..:...:.x...x.........:.x:.:.............x.x::...:x..x.:....:......:. 18M5D12M1D15M1I70M 84/115 73.0% 116/94230402 0.0% 7/115 6.1% 154683296 35531259 +3249 chr4 + 190214555 165414648 165414647 165414719 72 AAAGTATCCTGGATAACGTAGATATAGAGATAAAGTAATATATATATATACACACACACACACATACACACA chr4 - 94230402 70707568 70707567 70707639 23522764 23522763 23522835 72 AAAGTGGGTTGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .....:xx:..:.x..x::...x.x.x..:x....x..............:.:..........:...x.x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 94707080 NA +3340 chr4 + 190214555 165414689 165414688 165414801 113 ATATATATACACACACACACACATACACACACACACATA--TTTACATATATACA--CATATGTACTTATTTACAG-TGTATATAAAAAATA----ATTTAGAAGAATGCATCCAGAAACCA chr4 - 94230402 66904847 66904846 66904968 27325435 27325434 27325556 122 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAAGAGAACATTCTGGAGGACAGAAGGAGAAACCA ......:...::.........:.:.........:.:x..--..:.x:.:......--....:.:.:..x:.:x...-.x..x..:.:...x.----...:x.:..:.::x.xxx........ 39M2I14M2I19M1I15M4I26M 79/113 69.9% 122/94230402 0.0% 9/113 8.0% 98509842 91704713 +3154 chr4 + 190214555 165415744 165415743 165415834 91 TATATACAGTACATATATATTACATACATACATATAGTACATATTTGTGTAGTACACAGGTATAGTGCATATATATATATATTTGTCACAT chr4 - 94230402 69861012 69861011 69861097 24369306 24369305 24369391 86 TATATATAGTACATATATATTCAGAATATATATTTAGTACATATTTAAACAAGACACAACATTTGTTC-----TATTTTTATTTGCTGCAT ......:..............xx:x.:...:..x............:x::.:x.....:xxx.x..x.-----...x.x......:::... 68M5D18M 61/86 70.9% 86/94230402 0.0% 5/86 5.8% 95554732 NA +3104 chr4 + 190214555 165444159 165444158 165444253 95 CTATAAAGTCGGTGTTATTATTAGTCCCACATTATAGTAGAGGAAACTGAGGCATGGAGTAACCT---TGCCCAAAGTTTAACAGCTGGTAAATGATG chr4 - 94230402 92236047 92236046 92236138 1994265 1994264 1994356 92 CTGCAAGGGGGGGGCTGTGTTTGGCCCCATTTTACAGCAGGGGAAACTGAGGCATGGAGCAGGGTGTGTCTCCAAGG------AGCCGGTGAATTATG ..::..:.xx..x.:.:.xx..:.:....:x...:..:..:..................:.:xx.---.x:....:.------...:...:...x... 65M3I9M6D15M 62/89 69.7% 92/94230402 0.0% 9/89 10.1% 73208112 NA +3028 chr4 + 190214555 165445263 165445262 165445317 55 ATGTAAATTTATTTTCCCTTTTTTTGTTTTTTTTTTCTTTTAGGCACAGCAGAAT chr4 - 94230402 46715314 46715313 46715368 47515035 47515034 47515089 55 ATGCAAATCTGTTCCTCCTTTTTTTTTTTTTTTTTTCCTCCAAGCAATGCAGTAT ...:....:.:..:::.........x...........:.::.:...xx....x.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 118729949 71484606 +3060 chr4 + 190214555 165447553 165447552 165447639 87 AGAGGGAGACTCTGTCTTTAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAATATCTTTATTTTTT--CAGTAACAAATTAACCT chr4 - 94230402 47152891 47152890 47152979 47077424 47077423 47077512 89 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATATTACAATTAACAATGTGACTT .......x..x..::.xxx.............:.xx.....x.x....x...:......x.x...x.x..--x.x......xx.:..:. 70M2I17M 63/87 72.4% 89/94230402 0.0% 2/87 2.3% 118294662 71919893 +3073 chr4 + 190214555 165447554 165447553 165447618 65 GAGGGAGACTCTGTCTTTAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAT----ATCTTTATT chr4 - 94230402 32766367 32766366 32766435 61463968 61463967 61464036 69 GAGAGAAAGTCTGTGTTTAAAAAAAAAAAAAATACAGAAGATACAAGCAGAGAAAGTCCAATCCTTATT ...:..:.x.....x................:x.x....:.x.x...x.:.....x----...:..... 56M4I9M 51/65 78.5% 69/94230402 0.0% 4/65 6.2% 132681187 57533368 +3350 chr4 + 190214555 165453269 165453268 165453385 117 TTCTTTCTTTCTCATTTT------CTTTCCTTCTTTTTCTTTCTTTTTCCTTCCTTCCTTCCTTCCTTCTTTCC--TTCCTTCCTTCC-TTCCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTCTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCA--CCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x:::..:------..x...:..:.....:..:......::..x--..:...x.x:.:.x..:.--...:xxx....:-..:..................x.xx...::.:.:... 18M6I30M2D18M2I12M1I37M 79/115 68.7% 124/94230402 0.0% 11/115 9.6% 122371368 67843187 +4038 chr4 + 190214555 165455710 165455709 165455799 90 TGGCATGATGTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGAATTACAGGCGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......x....:------..:..:..:xx:x..:.............x...x.xx.x........:..:...........:....x.:.. 12M6D72M 64/84 76.2% 84/94230402 0.0% 6/84 7.1% 147258596 42955959 +3131 chr4 + 190214555 165456527 165456526 165456593 67 TTTCTCTCTTTCTTTGTTTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTTTGTTTCGACGGAG chr4 - 94230402 31754630 31754629 31754696 62475707 62475706 62475773 67 TTTCCCCACCCCTTTGTTTCTCTCTCTTTCTCTCATTCCCCCCCCTTTTTTTTTCCTTTTGAATGAG ....:.:x:::................:.:....x:..:.:.:.::.:...:..:x...:..xx... 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 133701897 56512658 +3053 chr4 + 190214555 165461168 165461167 165461229 62 AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAATAACAAAGGAACTGTGGA chr4 - 94230402 66946949 66946948 66947010 27283393 27283392 27283454 62 AAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTTTTGAA ....x:...x.x................:......::....x.:.:.x.x....x:.x..:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 98514219 91700336 +3327 chr4 + 190214555 165468964 165468963 165469068 105 TTTGACCTCTCTGTGCTTCAGGTTCTTCATCTGTAATATGGAAGTGATAATATCTACCTCATAGGATAAGGATTGAATGAGTTAATACATATAAAGTACTTGAAG chr4 - 94230402 7135896 7135895 7135991 87094412 87094411 87094507 96 TCTAACCTTCCTGTGCTTTAATTTCCTCAACTGTAAAACAGAAAGGACAGCACAGACCTCAAGGGGTAGTAATTAA---GGTT------TCTAAAGTACTTCAAG .:.:....::........:.:x...:...x......x.::...:x..:.::.:xx......x:..:..:x:...:.---:...------.x..........x... 76M3D4M6D16M 66/96 68.8% 96/94230402 0.0% 9/96 9.4% 158333068 31881487 +3009 chr4 + 190214555 165514468 165514467 165514508 41 AAAAAAAACAAAAACAAAAAAACAAACAACAGCAACAAAAA chr4 - 94230402 68691694 68691693 68691734 25538669 25538668 25538709 41 AAAATAGACAAAAGCAAACAAACAAACAACAACAACAAAAA ....x.:......:....x............:......... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 96822774 93391781 +3191 chr4 + 190214555 165516981 165516980 165517043 63 ATAATCCCCATTTTATAGATGACAAAACTGAGGCTCAGGGAGATTAAGTAATTCTCTCAAGGT chr4 - 94230402 10729199 10729198 10729261 83501142 83501141 83501204 63 ATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGT ..x.x.:........:..:..:x...........x..x:x..:..........:x.:..::.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 154787782 35426773 +3082 chr4 + 190214555 165521615 165521614 165521679 65 ACTAATGGAATATATATATACATATATACACACACATATATATACATATATATATGTATATATAT chr4 - 94230402 86658084 86658083 86658148 7572255 7572254 7572319 65 ACTACTGAAATATATCTATACATATACATATTTACCTATGGAGAAACATACACATGTTTATATGT ....x..:.......x..........:.:.:x:..x...:x.x.x.:...:.:....x.....:. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 78863531 NA +3033 chr4 + 190214555 165521627 165521626 165521677 51 TATATATACATATATACACACACATATATATACATATATATATGTATATAT chr4 - 94230402 50941868 50941867 50941918 43288485 43288484 43288535 51 TAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATAT ..x..x.x:......:....x...:......:...x....:.......... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 114579759 75634796 +3036 chr4 + 190214555 165539567 165539566 165539622 56 ACCAAGATGGTGAAACCCCGTCTCTACTAAAAAAAAAAAAAAAAAAAAAGAAAAAA chr4 - 94230402 54063623 54063622 54063678 40166725 40166724 40166780 56 ACCAAGACAGGGCAACCTTTATTCAATTAAGAAAAAAAAAAAAGGAAAAGAAAAAA .......::.x.x....::xx:..x.:...:............::........... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 111475944 78738611 +3262 chr4 + 190214555 165539589 165539588 165539644 56 TCTACTAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAATAGCCGAG chr4 - 94230402 71125480 71125479 71125535 23104868 23104867 23104923 56 TCTACCAAGAAATAAAAAATAAAAAAAGAGAGAGAGGAAAAAAAGAACAAGCCTAG .....:..:...x......x.........:.:.:.:........:..xx....x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 94414109 NA +3298 chr4 + 190214555 165541257 165541256 165541386 130 ATATATAATATAATATATTTTATATAATATATAGAATATATAGAATATATATATTCTATATAATATATATTATATAATATATAGAATATAT------AGAATATATATATTCTATATAATATATAGAATATAATAT chr4 - 94230402 67910065 67910064 67910199 26320204 26320203 26320338 135 ATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATAT-ACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATAT .....:....:x.x.x..x.xx...x.x...:.x....x...x.x.:......x.x..........:..x.....-.:..:.:::...x..------x..x..x....xxx.xx.xx....:...x..x.x..... 75M1D15M6I39M 89/129 69.0% 135/94230402 0.0% 7/129 5.4% 97631192 92583363 +3921 chr4 + 190214555 165541304 165541303 165541473 170 TATATATTCTATATAATATATATTATATAATATATAGAATATATAGAATATATATATTCTATATAATATATAGAATATA-ATATAATGTAATTATATTATAATTATATTATAATATATAATTATAT-TATAATTATATTATAATATATAATATAATTATATTATAATATAAT chr4 - 94230402 67910062 67910061 67910231 26320172 26320171 26320341 170 TACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAATATTTTATTA-ATGACAC-ACTACATTACAGAACAAT ..:....x.x...:x.x.x....xx...x.x...:.x....x...x.x.:......x.x..........:...x.....-..:.:.x:...x.x..xxx.:....x..xx:..:..x.:.x..:..-..x:.xx.....x..x..-..:.:.:-.:..:....:.:x.:... 79M1I46M1I18M1D7M1D18M 113/168 67.3% 170/94230402 0.0% 4/168 2.4% 97631242 92583313 +3055 chr4 + 190214555 165542924 165542923 165542975 52 GAGCTTTAAAACATCTATTATTTTTAAATTTCTCCTTTTTTTCTTCTATTTT chr4 - 94230402 68942916 68942915 68942967 25287436 25287435 25287487 52 GAACTGTAAGACGTCTATTATTTTTAATTTTTTTCTTTTTCTTTCCAATCTT ..:..x...:..:..............x...:.:......:.:.:.x..:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 96600008 93614547 +3219 chr4 + 190214555 165565969 165565968 165566030 62 AGACTCTGTCTCAAAAAAAGAAAAAAAGAAAAAAGAAAAAAAGAAAGAAAGAAAAAAAAGAA chr4 - 94230402 71125465 71125464 71125526 23104877 23104876 23104938 62 AGAGTCTGCATCAAATCTACCAAGAAATAAAAAATAAAAAAAGAGAGAGAGGAAAAAAAGAA ...x....:x.....xxx.xx..:...x......x.........:...:..:.......... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 94440504 NA +3338 chr4 + 190214555 165574766 165574765 165574829 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATTCACCAAAGACAAAAAAGAACCACAC chr4 - 94230402 77866074 77866073 77866137 16364266 16364265 16364329 64 AAAAAAAAAACAAACAAAAAACAACAAAAAACACAAACACCCCAGAGACAACAAAAGACCAAAC ..........x...x......x..x......x.x...:x.x...:......x...::....x.. 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% 87708692 NA +3390 chr4 + 190214555 165605231 165605230 165605387 157 ATTGTTCTTACAACTAGCCTTAAAGTTTCTTCTTTCGTCCATC---------------CTCCTTTTCTGTCTGTCTCCCT-----CCTTCCCTCTAT--TCATCTCTTTCTCTATCTTTCCTCAGATCTCCTTCCCTCTTTCTTTTCCTCCTTCTCCTCTCCCTTCTTTTCTTTATTTT chr4 - 94230402 72617048 72617047 72617220 21613183 21613182 21613355 173 ATTGCTCTTACAATCAGTTTGAAACTTCATTCTCATTTCTCACTGCATGAGCACTGAGCCCCAATTTTTTCAATCTGCCAATATACATTCACTGTACAATCATCACATTTC------TTCCTCTGATTTTCTTTCTGCTTTCCTTTCCTTCATGTCTTTTCCCATTCTTGCTTTATCTT ....:........::..::.x...x..:x....:x:x..:xx.---------------.:..xx..:.x..x:...x..x-----.x...x..x..:--.....x.x..::------......x...:.:...:.:x.....:......:.x.x..:.:....x.::..x......:.. 43M15I22M5I12M2I12M6D62M 101/151 66.9% 173/94230402 0.0% 28/151 18.5% 92988183 NA +3038 chr4 + 190214555 165615375 165615374 165615447 73 CTGCAACCTCCGCCTCCCAGGTTCAAGGGATTCTCATGCCTCAGCTTCCTGAGTAGCTGGGATTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.::........x.x...x..x.x......:.::::.........:.:....x.::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 147418249 42796306 +3280 chr4 + 190214555 165634367 165634366 165634414 48 TCTAAATAAACCAAATTTTTTATATATATATATATATACACACACACA chr4 - 94230402 59708344 59708343 59708391 34522012 34522011 34522059 48 TCTATATACATCAAATTTTCTGTGTATATATACACATACACACACACA ....x...x.:........:.:.:........:.:............. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 105926023 84288532 +3181 chr4 + 190214555 165643420 165643419 165643525 106 AAACAAATTTTGTGCCCTAAAACTTAGAGTATAATAAAAAAAAAACAAAACAAAAAAAAAACAAACAGCCCCATCAACAAGTGGGTGAAGGATATGAACAGACACT chr4 - 94230402 70515906 70515905 70516011 23714392 23714391 23714497 106 AAGTAAGATTTTTCCCAAAGAACTTATTGTTTATTAAAAAAAAAACACAACAACAACAACAACAAAACACCTCTAAATCTAAGGATGAAAATTATGGGCAAACACT ..::..:x...x.x..xx.:......xx..x..x.............x.....x..x..x.xx..x.xx..:x.x..:xx:x..:....::x....::..:..... 106M 69/106 65.1% 106/94230402 0.0% 0/106 0.0% 95127514 NA +3356 chr4 + 190214555 165659383 165659382 165659455 73 CTTTGTCTCAAAAAACAAACAAACAAACAAACAAAAAAAAAAAACAGAAGACTTGCATTGAACCTTAAAGCTG chr4 - 94230402 38453249 38453248 38453316 55777087 55777086 55777154 68 CCTTATCTTAAAAAACAAACAAACAAAACAACAATAACAAAAAACAG-----TTACAGTAAAACCTAATTCTG .:..:...:..................xx.....x..x.........-----..:..x.:..x.:...xx... 47M5D21M 54/68 79.4% 68/94230402 0.0% 5/68 7.4% 127206134 63008421 +3082 chr4 + 190214555 165693870 165693869 165693943 74 TTTTAACAAAGCACATTTAAAAAGTAAAAAAAATTAGAAAATTAAAAATAGGAAAAAAGCTTATAGAATAAGAA chr4 - 94230402 29869964 29869963 29870035 64360368 64360367 64360439 72 TCTTACTAAA--ACATTGGACAGGGAAGAGAAAACAGAAAATGAAAAATATGAAAAATCCATATAGAATAAAAA .:...x:...--.....x:.x.:.x..:.:...x:.......x.......x......xx.x..........:.. 10M2D62M 54/72 75.0% 72/94230402 0.0% 2/72 2.8% 135823906 54390649 +3303 chr4 + 190214555 165704204 165704203 165704275 72 CTGCAATCTCCGACCCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..::.:xx::.::.::........:.x...x.xx.x........:..:.........:.:....x.... 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 147507078 42707477 +3111 chr4 + 190214555 165707186 165707185 165707232 47 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAT chr4 - 94230402 6438506 6438505 6438552 87791851 87791850 87791897 47 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGAT ....:.....:.....::.............:.:...:..::..:.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 159268680 30945875 +3028 chr4 + 190214555 165717749 165717748 165717808 60 ATTCCTCTAGTTTTTTGGGGGTTTTTTTGTTTTTTGTTTTTTTTACCTAAAAATGAAATT chr4 - 94230402 58431198 58431197 58431257 35799146 35799145 35799205 60 ATTTCCCTGTTTTTTTGGGGGTTTTTTTTTGTTTTTTTTTTTTTAGGTTGTAATGAGTTT ...:.:..:x..................x.x....x.........xx.x:x.....:x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 107286551 82928004 +3197 chr4 + 190214555 165755504 165755503 165755581 78 TATACTATATATATGCATATATTTTTATTTATTTTA-----TTTTATATATATATATATATATATATATTTTTTTTTCTTTTT chr4 - 94230402 70265102 70265101 70265179 23965224 23965223 23965301 78 TATATTTTATTTATTC-----CTTTTACTTACTTCAGTGGACTTTAAATATATCTATATATATATGTAGTCTTTTTTTTTTTT ....:.x...x...x.-----:.....:...:..:.-----:....x......x...........:..x.:......:..... 16M5D15M5I42M 58/73 79.5% 78/94230402 0.0% 10/73 13.7% 95490402 NA +3346 chr4 + 190214555 165772923 165772922 165772970 48 AAAATATCATTCTGCTATTAATTTGCATTTTCCTGATTATTAATGATG chr4 - 94230402 14352463 14352462 14352510 79877893 79877892 79877940 48 AAAGTTTCACTTTGCTATTAATTTGCCCTTTCCTGATTATTCATGATG ...:.x...:.:..............x:.............x...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 151420460 38794095 +3127 chr4 + 190214555 165779235 165779234 165779337 103 CTTTGTATGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTT----TTTGACAGAGTCT chr4 - 94230402 39435829 39435828 39435935 54794468 54794467 54794574 107 CTTTGTATGTCTCTCTTTCAGGCTAGCTCTCTGCTGATCGCTGCCCTTTTCTTGTGGTACTTCATTTTTTTTCCTTTTTTTTTTTCTTTTATCCTGTGAGAAAGCCT ............:......xxx..xx..:...x::xx..x:.x::::......x:xx.x:...x..:...:.:::..........:....----.x...x.:..:.. 90M4I13M 67/103 65.0% 107/94230402 0.0% 4/103 3.9% 126343406 63871149 +3062 chr4 + 190214555 165784402 165784401 165784475 74 AAGTACACACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGGAAAGAGACCTGTTGAA chr4 - 94230402 66946938 66946937 66947010 27283393 27283392 27283465 73 AAGTA-ACAAGCAAAATGAAATACAAAAAAAAGAAAGAAAAAAAAGAGGAGAATAGTGAAATAGGACTTTTGAA .....-...x::x...x:...x.x........:...:........:.::.:..:..x....x..:x..x..... 5M1D68M 53/73 72.6% 73/94230402 0.0% 1/73 1.4% 98837464 91377091 +3747 chr4 + 190214555 165834861 165834860 165834934 74 CTGCAGCTTCAAACTCCTGGGCCGAAGTGATCCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:....::x..:..:.....::x.....x.:.x.xx.x........::::.........:......x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 147637735 42576820 +3027 chr4 + 190214555 165841231 165841230 165841304 74 CATATGAGAGAGAGAGAAAGAAAAGAGAGAGGGGTGAAGAAAGAGGAGGAGGAGGAGGAGATGCAAGGGAGAAG chr4 - 94230402 16776435 16776434 16776508 77453895 77453894 77453968 74 CATTGGACAGAGAGGGACAGAAAAGAGCTGGAAGCAAAAAGAGGGAAGGAGCCGGGGGGGACGCGGGGACGGAG ...xx..x......:..x.........xx:.::.::..:.:..:.:.....xx..:..:..:..::..:x.:.. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 149064796 41149759 +4504 chr4 + 190214555 165863212 165863211 165863315 104 AATCCTTCCCTCATTTCCTAAAGTGAAAATGATCATTTTTCTTTCTTTCTTTG-TTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTAGAGCTTCGCT chr4 - 94230402 93183503 93183502 93183601 1046802 1046801 1046900 99 AATCCTCCCA------CCTAAAATGAAAACGATTTTTTTCCCCTCCTTCCTCGATTTTTTTTCTTTTTTCTTTTTTTGGTGTCTCTTTTGAATTAAGGTGTCGTT ......:..x------......:......:...:x....:.::..:...:.:.-.......:.......:.......xx.x.:.:......:...::.:x...:. 10M6D37M1I51M 73/98 74.5% 99/94230402 0.0% 7/98 7.1% 72679709 NA +3148 chr4 + 190214555 165863252 165863251 165863315 64 CTTTCTTTCTTTGTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTAGAGCTTCGCT chr4 - 94230402 35738518 35738517 35738581 58491822 58491821 58491885 64 CTTTGTATCTCTGTTTTGGTCCTTTTTTTTTTTTTTCCTGTTATTTTTCTGATAGGACTTCATT ....x.x...:......xx.................::.x..x.....xx.x...::....::. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 130124734 60089821 +3288 chr4 + 190214555 165936183 165936182 165936266 84 TTTTGCTTCATATATATAT---ATATATTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTGAGATGGAGTCACACTCTGTTGTCCAGGA chr4 - 94230402 84182643 84182642 84182724 10047679 10047678 10047760 82 TTTTTCTGCATTTACAGTTCCCATATATTTTTTACCTTTTCTTCTTTTTTTTTTTTTTAAGTTTCAGTCACA-----TTGTCAAGAA ....x..x...x..:.xx.---...........x:::...:.................:..x.xx.......-----.....x..:. 19M3I50M5D10M 62/79 78.5% 82/94230402 0.0% 8/79 10.1% 81753540 NA +4417 chr4 + 190214555 165936295 165936294 165936378 84 CTACAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCGCCACCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT .....:..:xx.x..:.............x...x.xx.x........::.............:....--.:...:....::... 67M2D15M 64/82 78.0% 82/94230402 0.0% 2/82 2.4% 147739169 42475386 +3132 chr4 + 190214555 165973741 165973740 165973823 83 CTGCAATCTGCACCTCCCAGGTACAAGTAATTCTCTTGTCTCAGCCTTCCAAGCAACTGGAAATACAGGTGTGAGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..::.::x.x..:.::...x.....:x...x.xx.x.........:....:.:......x....--:...x:....::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 147776615 42437940 +3001 chr4 + 190214555 166038199 166038198 166038265 67 TTCTTTCTTTCCTTCCTCTCTCCTTCTCTGCCTTTCTTTCTTCTTTTTTTCTTCCTTCCTTTGTTAT chr4 - 94230402 72861132 72861131 72861198 21369205 21369204 21369271 67 TTCTCTTCTTGCTTCCTATTTTTTTCCCTAATTTTGTTCCTTTTTCTTTGCCTCCTTCCTCTTCTGT ....:.::..x......x.:.::...:..:x:...x..:...:..:...x.:........:.x:.:. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 93177067 NA +3130 chr4 + 190214555 166051230 166051229 166051278 49 CTCTTTTCTTTTTTCTCTTTTTTCTTTTTTCTCCTCCCTCCCTCCCTCC chr4 - 94230402 20596770 20596769 20596818 73633585 73633584 73633633 49 CTCTTTTTTTTTTTTTTTTTTTCCCTTCCTTTTCCCCCTCCCCCCCCCC .......:......:.:.....:.:..::.:.:.:.......:...:.. 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 145454460 44760095 +3240 chr4 + 190214555 166051266 166051265 166051353 88 CCTCCCTCCCTCCCTTCTTTCTTCCCTCCCTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTCTTTCTTTCCTTTCTTT chr4 - 94230402 93339646 93339645 93339733 890670 890669 890757 88 CTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCT .:::.....x..x.:...xx:...:.:.:x:x..:..:..:..:.x.:.x:.:.........x:...:......:..:.x.:::..:. 88M 54/88 61.4% 88/94230402 0.0% 0/88 0.0% 72711620 NA +3095 chr4 + 190214555 166061205 166061204 166061272 68 CTTCCTTTTTTACTGCCTACTTTTCCTCCTTTCCTTTTTTTTTTTTCTTTTTTTTTTTTGAGACAGAG chr4 - 94230402 17623041 17623040 17623098 76607305 76607304 76607362 58 CTTCCTTTCTCAAC----------CCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAG ........:.:.x:----------......::.::.............x....x........:..... 14M10D44M 47/58 81.0% 58/94230402 0.0% 10/58 17.2% 148438164 41776391 +3096 chr4 + 190214555 166066128 166066127 166066224 97 ATTTTAGCAACAGTTTTTTATCTTTTTATTTAGCAATGTATTTTTTCTTATTTTAATATATTTTCATTATTATTAAGTTAATATTAAAATTGTGCTT chr4 - 94230402 25434586 25434585 25434682 68795721 68795720 68795817 97 ATTTTTGCTGTATATTTTTAGACTATTATGTATATACACATGTTACTTTATTTTAGTAAATTCCCATTATTATTTAGTTCAGAATAAAAAAGTGTCT .....x..x::.xx......xx:.x....x..xxx.:::..x..x::........:..x...::..........x....x.x.x.....xx...::. 97M 64/97 66.0% 97/94230402 0.0% 0/97 0.0% 140631542 49583013 +3140 chr4 + 190214555 166076149 166076148 166076221 73 TGCAGCCTTGACCTCCCAGGCTTAAGCAATTCTCCCACTTCAGCCTCCAAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.....:x:.x..:.::..:.:...::x...x.xx:x:.......::x..........:......x...... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 147879022 42335533 +3684 chr4 + 190214555 166127185 166127184 166127255 71 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTATAGGCATGCACCACCACGT chr4 - 94230402 18197139 18197138 18197207 76033196 76033195 76033264 69 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:...........::x...x.xx.x........::.............:..:.--.:........:::.. 54M2D15M 53/69 76.8% 69/94230402 0.0% 2/69 2.9% 147930046 42284509 +4031 chr4 + 190214555 166142595 166142594 166142676 82 GTAGCCAATATTCAAATGAGAACTTTGAAGGCTGAAGAGGAACTGGGTCCCATGTGAACAGCAATTGAAAGGGGGAGTCAGT chr4 - 94230402 57853549 57853548 57853628 36376775 36376774 36376854 80 GTAGCAACTGTTCAAACCAAGGCTCTGAAGACTGAAGTGGAGCAGGGTTCCATGTGAACAGCAGCTGAGCATGG--GTCAGT .....x.x.:......:x.:::..:.....:......x...:.x....:..............::...:x:x..--...... 74M2D6M 60/80 75.0% 80/94230402 0.0% 2/80 2.5% 108289046 81925509 +3039 chr4 + 190214555 166151052 166151051 166151105 54 TGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCAAAGAAGATGC chr4 - 94230402 37847422 37847421 37847475 56382928 56382927 56382981 54 TGACGAAGACGAAGGAGAAGAAGGTGAAGTTGAAGAGGGGGACAAAGAAAATAC ...x.....x....:........:x....xx.....:.::.:.......:..:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 128303630 61910925 +3091 chr4 + 190214555 166163468 166163467 166163507 40 TGTGTGTGTATGTGTGTGTGAGAGAGAGAGAGAAAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .........:........x..............:..::.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 147181153 43033402 +3054 chr4 + 190214555 166163470 166163469 166163505 36 TGTGTGTATGTGTGTGTGAGAGAGAGAGAGAAAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .......:..:....................:.... 36M 33/36 91.7% 36/94230402 0.0% 0/36 0.0% 84534406 NA +3305 chr4 + 190214555 166163470 166163469 166163509 40 TGTGTGTATGTGTGTGTGAGAGAGAGAGAGAAAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .......:.......................:....::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 147181155 43033400 +3091 chr4 + 190214555 166163472 166163471 166163511 40 TGTGTATGTGTGTGTGAGAGAGAGAGAGAAAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .....:..........x............:......::.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 147181157 43033398 +3056 chr4 + 190214555 166180063 166180062 166180127 65 TGGTGAAATCCCATTTTTACCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAA chr4 - 94230402 75995579 75995578 75995643 18234760 18234759 18234824 65 TGGAAAAACCACTTGTTTACAGTTAAACACAGCAAGAAAAAAAAAGAGAAAGAAAAAGAAGGAAA ...x:...:.x.x.x.....x:xx...x.x.:x..:...........:............:.... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 90184484 NA +3244 chr4 + 190214555 166180071 166180070 166180147 77 TCCCATTTTTACCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAAAAAAAGGAAAAGAAGACAA chr4 - 94230402 4674535 4674534 4674609 89555794 89555793 89555868 75 TCCCATTTT--CTAGAAAACTAAAAAAAAAAAAAAAAGAAGAAGAATACTATAGCAATAGAAAGGTGAAAGTAATAA .........--.:.:....xx...................:.....x.xx.x..x..x.:.....x:..::x:.:.. 9M2D66M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 161505536 28709019 +3016 chr4 + 190214555 166186927 166186926 166187005 79 AAATGTTTATCTTCCAACCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCT chr4 - 94230402 93183523 93183522 93183601 1046802 1046801 1046880 79 AAACGATTTTTTTCCCCTCCTTCCTCGATTTTTTTTCTTTTTTCTTTTTTTGGTGTCTCTTTTGAATTAAGGTGTCGTT ...:.x..x.:....xx:.:..:..:xx........:......:.......xx.x.:.:......:x::::..x...:. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 73003404 NA +3192 chr4 + 190214555 166251118 166251117 166251216 99 TGTATCCCAGAACTTAAAAGTAAAAAAAAAAAATAGTAAAGAGAAAATGAAGTCTCAGTAAAGGAATTTTACATAGTATGTGACCATTTTCAATAATTT chr4 - 94230402 66541347 66541346 66541439 27688964 27688963 27689056 93 TGCACTCCAGAACTTGAAAAAAAAAAAAAAAAAGAGAGAGAAGAAAATGA----TCATGATATGCTACTTGAATTAAATCTG--CATTTTCAATGATTT ..:.::.........:...:x............x..x:.::.........----...xx.x.x.xxx:..:x..x:x..x..--..........:.... 50M4D28M2D15M 67/93 72.0% 93/94230402 0.0% 6/93 6.5% 99709771 90504784 +3640 chr4 + 190214555 166253715 166253714 166253880 166 TACACATACACAATGTAGAATATATACACACACAATATTTTTATATATATATATATATACACACATATATATATA-TACACATATATA-------TATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964725 14964724 14964884 79265519 79265518 79265678 160 TACTCATA---AATGTATAA---ATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCG--------TGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x....---......x..---.....x:::.x:x::x:...:.x.x..::..x.:.....x..x.x.x::.x.-.:..:x......-------.:.:x.....x....:.x.:.:--------.:.::....:.:...:....:...xx........::............. 8M3D9M3D52M1I12M7I22M8D49M 103/152 67.8% 160/94230402 0.0% 22/152 14.5% 151288990 38925565 +3985 chr4 + 190214555 166253732 166253731 166253882 151 GAATATATACACACACAATATTTTTATATATATATATATATACACACATATATATATATACACATATATATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACAT chr4 - 94230402 73121070 73121069 73121216 21109187 21109186 21109333 147 GAAACTGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACA----TATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ...xx.:.....x....:x.x:.x..xx:x::.:.::..::.:.:x....:.:.....:...x.x::..:x:..:.:..:....x:..:..:x:.....:.:x:....----....x....:.x....x.x.......:::.:.x:..x.. 108M4D39M 89/147 60.5% 147/94230402 0.0% 4/147 2.7% 93132662 NA +3492 chr4 + 190214555 166253746 166253745 166253881 136 ACAATATTTTTATATATATATATATA-------------TACACACATATATATATATACACA-----------TATATATATATACACATATATATATACACATATATAT----ATATACACATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 14964721 14964720 14964883 79265520 79265519 79265682 163 ATATTACTCATAAATGTATAAATACAAGTGCTGAGCACTTACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGT-TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA .:.x..:.:x..x..:....x...:.-------------....x.x..::..x.:..:..x..-----------.::..x......x.x:.:.-.:.:x.....x....:.----:.:.:....::.:...:..:.:...xx........::............ 26M13I24M11I19M1D17M4I49M 93/135 68.9% 163/94230402 0.0% 29/135 21.5% 151289025 38925530 +4143 chr4 + 190214555 166253778 166253777 166253887 110 CATATATATATATACACATATATATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:.::..::...:x....:.:.....:...x.x::..:x:....:.::....x:..:..:x:.....:.:x::...:.:.x.:..:.x....x.x........:.... 110M 69/110 62.7% 110/94230402 0.0% 0/110 0.0% 93132678 NA +3542 chr4 + 190214555 166253794 166253793 166253869 76 CATATATATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:...:.:::....x.:..:..:x:.:....:...::x:....xx...:.:.............x..... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 157858007 32356548 +3320 chr4 + 190214555 166253797 166253796 166253871 75 ATATATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:...::::::...x.:..::.:x..:....:...:.x:.:..xx...:...............x..... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 157858009 32356546 +3451 chr4 + 190214555 166253799 166253798 166253873 75 ATATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.:..::::.::...x.:.:::..x..:....:..::.x..:..xx...................x..... 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 157858011 32356544 +3403 chr4 + 190214555 166253801 166253800 166253883 83 ATATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.:.::.::.:.::...x...::...x..:....::.:::x..:..xx.:.................x.....x.::x... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 157858013 32356542 +3534 chr4 + 190214555 166253803 166253802 166253885 83 ATATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.::::..:.:.::...x....:...x..:...:::..::x..:..xx.:.................x.....x.::x... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 157858015 32356540 +3281 chr4 + 190214555 166253805 166253804 166253887 83 ATACACATATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:::::...:.:.::.:.x.:..:...x..:.:.::...::x..:.:xx.:.................x.....x..:x... 83M 53/83 63.9% 83/94230402 0.0% 0/83 0.0% 157858017 32356538 +3811 chr4 + 190214555 166253812 166253811 166253889 78 TATATATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:...:.:.:..:.x.:..:...x....:..:...::x....:xx.:.................x.....x..:x... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 157858019 32356536 +3163 chr4 + 190214555 166253817 166253816 166253913 97 ATATACACATATATATATATACACATATATATATACACACACACACACACACACACACACACACATATATATATATATATATATATATGCATGCCAC chr4 - 94230402 4417343 4417342 4417439 89812964 89812963 89813060 97 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCAC ..x..x.........:.:.:.....:.x:x.:....:..::x:x::x::....:::.:xx.x:...x..x.....:.:....x...x.::....... 97M 60/97 61.9% 97/94230402 0.0% 0/97 0.0% 161836474 28378081 +3131 chr4 + 190214555 166253843 166253842 166253908 66 ATATATATACACACACACACACACACACACACACACACATATATATATATATATATATATATGCAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:...::.........:...........:.:x:.x:.x:.x:.:....:.xx:...:.... 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 99348996 90865559 +3009 chr4 + 190214555 166253856 166253855 166253902 47 CACACACACACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x....::...:..::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 78881109 NA +3131 chr4 + 190214555 166253858 166253857 166253904 47 CACACACACACACACACACACACATATATATATATATATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x..........x....::...:..::....... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 78881111 NA +7592 chr4 + 190214555 166286793 166286792 166287073 281 TTTATTTGTTGAAATTATTTGAAATGATTGAAACGGCAAGCACGCTTTGGCATATATTTAGTCACTTCAGGGTACCGACACATTATTAGTATTCAGCACTAATACCAGTGGGCACATTTGTACAGTTATT-----------------TTCCTTTTTTT---GTCATGTGAATGCAGTATTGTTTCCACATGCATACATCCCTCTATAGGCTTAATGAATGTATTTGTCTGTTGGCAGGTGCATGCAAATATTGTTAGATTGAATATGTGATTG----TTTATTTTTCAGAAATGTAAATTGAATG chr4 - 94230402 68814813 68814812 68815106 25415297 25415296 25415590 294 TTTATTTAGTAGAGTTATTTCAGAAGACTGGGACAGCTGGATGGTTTTGGCACCTTCTTAGACACATCAGGATTCTGGAACTTTATTAGTATTCCTTCTCTATTACAGTGGTTATTTCTGTA-AGTTAATAAATAAATAAACAGAAATTCCTCTTTTGATAGTGATATGATTTCTGTATTAT----------GTATATTCCCAACCAGCTTTAATGAATATACTTCACTGTTGGCAGCTCTATGTATATACTGTTGAGCTGGATGTGTGGTTGATCATTCTTTTTTCATGGTTATAATTTGAATG .......:x.::.:......x.:.x..:..::..:..x:.xxx.:.......:x.x:....x...x.....:.x.:.:x..x............xx:x::x..xx......x:.:x.:....-.....x.-----------------.....:....x---..x..:...x.x.x.....:.----------:..:..:..:xxx:..x:.........:..:..xx..........x.x:...:.x...:....::::..:..:....:...----..:x.......x::x.:...x....... 122M1D7M17I11M3I21M10D81M4I28M 182/270 67.4% 294/94230402 0.0% 35/270 13.0% 97471980 92742575 +3149 chr4 + 190214555 166327982 166327981 166328108 127 GTATATATATATATGTATGTATGTATGTATATACATATATGTATGTATGTATGTATATACATATATGTATATATGTATATATATGTGTATATATACACATTTTGCATAT--GCTGAATTTGCATTCTTA chr4 - 94230402 51294126 51294125 51294251 42936152 42936151 42936277 126 GTATTTCAGCATATGCGTATCTGTGTGCACACCTGCATATGTATGTAGGTATGTATATACATGCATCCAAAAATA---AAGTGTTTGGCCAGACAGAGTTCCTGCCTATTAGATGACTTCACATTATTA ....x.xx::.....::.:.x...:..:.:.:x:::...........x..............::..x:.x.x..:---.x:.:.x..xx:.x.:.x.xx.::...x...--.x...x..::....x... 75M3D31M2I18M 79/124 63.7% 126/94230402 0.0% 5/124 4.0% 115033856 75180699 +3007 chr4 + 190214555 166328021 166328020 166328080 60 TGTATGTATGTATGTATATACATATATGTATATATGTATATATATGTGTATATATACACA chr4 - 94230402 37363040 37363039 37363099 56867304 56867303 56867363 60 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACA ...:.::..::x...........::.::x......xx:.:...........:...x.... 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 128964981 61249574 +3588 chr4 + 190214555 166329007 166329006 166329120 114 GAACTGAAGAAAGAAAAAGAAAGGGAGAGCTGAGAAAGAGAGGAAGGGATGGAAGGAGGGAGGGAGGGAGGCAAGGAGCAGG-GGAAGGGAGGGAAGAAGGAAGTAAAGAAAGAA chr4 - 94230402 11253658 11253657 11253772 82976631 82976630 82976745 115 GAAATGAAGGAAGAATAACAAAGGGGACTCAGACAGAAAAAGGAAAGGAGAGAGGAGAGATGAGAGCCATACAAAAAGCAGATGGAAAAGTAGGAGAAACAAAAGACAGACAGAA ...x.....:.....x..x......::xx.x..x.:.:.:.....:...x:..:.:::.:x.:...xx.x:...::.....:-....::.x:...::..x:..:x.x...x.... 82M1I32M 72/114 63.2% 115/94230402 0.0% 1/114 0.9% 155075349 35139206 +3203 chr4 + 190214555 166346374 166346373 166346443 70 TTTTGAAATATGTGTGTGTGTGTATATATATACATATATATATGTGTGTATATATATATACATATATATA chr4 - 94230402 47095157 47095156 47095226 47135177 47135176 47135246 70 TTTAGGAGTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ...x.:.:.:..:...........:.:.:......:..:...x::xx:.x:..:.:...:......:.:. 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 119251217 70963338 +3080 chr4 + 190214555 166358901 166358900 166358945 45 AACTGCAGTCCCTTCTCTTTTCTCTCTCTCTCTCTTTTTTTTTTT chr4 - 94230402 86355145 86355144 86355189 7875214 7875213 7875258 45 AATTCCAAGACCTTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTT ..:.x..:xx.........:.............:........... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 80003756 NA +3859 chr4 + 190214555 166390930 166390929 166391016 87 CTGGGTGACAGAG--AGAGACTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707551 70707550 70707639 23522764 23522763 23522852 89 CTGAATGGAAAAGGCATAAAGTGGGTTGAAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ...::..:x.:..--.x.:.x..xx.::..:....x.:.....x.::....::...........................::..x.x.. 13M2I74M 63/87 72.4% 89/94230402 0.0% 2/87 2.3% 95683379 NA +3457 chr4 + 190214555 166390951 166390950 166391020 70 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 60979336 60979335 60979400 33251003 33251002 33251067 65 TCTTGTAAAAAAATAATAAAAACAAACAAAAAC-----TCTATATATACACATATATACACACACACACA ...::x.......x..x.....x...x.....:-----.x............:.:.:............. 33M5D32M 53/65 81.5% 65/94230402 0.0% 5/65 7.7% 105411615 84802940 +3238 chr4 + 190214555 166390955 166390954 166391019 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 60979345 60979344 60979409 33250994 33250993 33251058 65 AAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ....x..x.....x...x.....xxxx.......:.:...................x.x.x.x.. 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 105411610 84802945 +3373 chr4 + 190214555 166390955 166390954 166391014 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACA chr4 - 94230402 70707580 70707579 70707639 23522764 23522763 23522823 60 AGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA .:....x.:.....x.::....::..x...............:........::..x.x.. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 95683375 NA +3512 chr4 + 190214555 166390955 166390954 166391021 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 60979343 60979342 60979409 33250994 33250993 33251060 67 AAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ......x..x.....x...x.....xxx........:.:.....:.............x.x.x.x.. 67M 53/67 79.1% 67/94230402 0.0% 0/67 0.0% 105411612 84802943 +3695 chr4 + 190214555 166390956 166390955 166391023 68 AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACACAC chr4 - 94230402 60979342 60979341 60979409 33250994 33250993 33251061 68 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC .......x..x.....x...x.....x.x........:.:...:.:.............x.x.x.x.. 68M 54/68 79.4% 68/94230402 0.0% 0/68 0.0% 105411614 84802941 +3473 chr4 + 190214555 166390958 166390957 166391018 61 AAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....::x...............:..........::..x.x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 95683379 NA +3268 chr4 + 190214555 166390960 166390959 166391020 61 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....x:x.............:.:..........::..x.x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 95683381 NA +3097 chr4 + 190214555 166390990 166390989 166391095 106 ATATATATACACACACACACACACACACACACACATATATATATACACACACACATATATACACA------CACACATATATATATAAAATAGTATAAACTACAGAACATAA chr4 - 94230402 66904847 66904846 66904958 27325445 27325444 27325556 112 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAAGAGAACATTCTGGAGGACAGAA ......:...::.........:...........:..x..x:.x:.x::::.:...xx:....:..------.x..xx.x..x..:x:...x..x.:.xx..:x..:...x.. 65M6I41M 69/106 65.1% 112/94230402 0.0% 6/106 5.7% 99486143 90728412 +3131 chr4 + 190214555 166438949 166438948 166439004 56 TGGTAAAATGACTGTTTTTTTGTTTTTTTGTTTTTTTGTTTTTTTTTTTTTTTGCT chr4 - 94230402 26286544 26286543 26286599 67943804 67943803 67943859 56 TGGCCCAGTCAGTGTTTTTTTGTTTGTTTGTTTTTTTGTAGTTTTTTTCTGTTGCT ...:xx.:.x.x.............x.............xx.......:.x..... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 140152405 50062150 +3402 chr4 + 190214555 166446856 166446855 166446958 103 ATATATATGTGTATATATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATA--TACACATACACACACACACACACACGGG chr4 - 94230402 73121107 73121106 73121211 21109192 21109191 21109296 105 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAG ..::....x::..:.:.....::::x:x.::..x...:...::....x:......x......:.:x..::.....--...:.x:...x.x.......:::.:::. 75M2I28M 64/103 62.1% 105/94230402 0.0% 2/103 1.9% 93325749 NA +3038 chr4 + 190214555 166446867 166446866 166446908 42 TATATATATATGTGTGTGTGTGTGTATATATATATATATACA chr4 - 94230402 19559286 19559285 19559327 74671076 74671075 74671117 42 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ...x.x.x.x................................ 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 146887581 43326974 +3456 chr4 + 190214555 166446867 166446866 166446950 84 TATATATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACA chr4 - 94230402 35554958 35554957 35555041 58675362 58675361 58675445 84 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x......x..x.........:::....:x:.:......:.:.::..:.x.x.......x.x..x..x:.x..x.:...x... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 130891909 59322646 +3081 chr4 + 190214555 166446869 166446868 166446952 84 TATATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACACA chr4 - 94230402 35554958 35554957 35555041 58675362 58675361 58675445 84 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACA ..x......x..x.........:.:....:x:.:....:.::..:...:.x.x:...:..x.x.:x..x::x..x.:...x... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 130891911 59322644 +3101 chr4 + 190214555 166446872 166446871 166446959 88 ATATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACACACACGGGG chr4 - 94230402 81401293 81401292 81401380 12829023 12829022 12829110 88 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAGGG ....x.x.....x.....x..x.x.......:...x:x..::..:..x:.....:.:....x.::.x..:.::x.:::...x.x:... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 85045579 NA +3024 chr4 + 190214555 166446874 166446873 166446959 86 ATATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACACACACGGGG chr4 - 94230402 81401293 81401292 81401378 12829025 12829024 12829110 86 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGAG ....x.x.....x.....x..x.x.......:.:.x.x...:..:..x....:.:.:..:.x..::x..:.::x.:::...x:.:. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 85045581 NA +3939 chr4 + 190214555 166446876 166446875 166446989 114 ATGTGTGTGTGTGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACACACACGGGGCATTAGCCAAAAATATGTACCAGGCCATAA chr4 - 94230402 8395788 8395787 8395899 85834504 85834503 85834615 112 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACAT-TA-ATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTACATTCTGGCAAATAA ........:......:...x.:..:...x....::.....::x..::.-..-...:.....:.........x.....x.:.::xx.xx.:..x...x..::.x.::.xxx.... 48M1D2M1D62M 77/112 68.8% 112/94230402 0.0% 2/112 1.8% 158051088 32163467 +3044 chr4 + 190214555 166446887 166446886 166446948 62 TGTGTATATATATATATATACACGTGTATATATAT--GTGTATATATACACATACACACACACA chr4 - 94230402 37363040 37363039 37363103 56867300 56867299 56867363 64 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA ......:...:x.:........:.:::.x......--........:.::.::..:x........ 35M2I27M 46/62 74.2% 64/94230402 0.0% 2/62 3.2% 129083847 61130708 +3667 chr4 + 190214555 166446887 166446886 166446954 68 TGTGTATATATATATATATACACGTGTATATATATGTGTATATATACACATACACACACACACACACA chr4 - 94230402 8395789 8395788 8395856 85834547 85834546 85834614 68 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACA .....:...:.:.::...x...:..:.x..:......:.::x..:.:xx................... 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 158051098 32163457 +3089 chr4 + 190214555 166480371 166480370 166480409 39 AAAAAACAACAAAAAGCAAAACAAAACAAAAAACCACAA chr4 - 94230402 90096691 90096690 90096729 4133674 4133673 4133712 39 AAAAAACCACAAAAAACAAAACAAAACAAAAAACCCCAA .......x.......:...................x... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 76383680 NA +3125 chr4 + 190214555 166516350 166516349 166516410 61 ACAAAAAAAAAAGAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGACGGGCAACTAGAGGGA chr4 - 94230402 50257400 50257399 50257460 43972943 43972942 43973003 61 ACAAAAGCAAAAGAAAAAAAAATGAAGGAACCACAGAAAGAGTCACAGTTAATTGGAGGGA ......:x..............x...:...xx.x.......:xx..:.x:..:.:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 116258950 73955605 +3363 chr4 + 190214555 166522222 166522221 166522304 83 CTCCACCCTATAATCCTTCTATCACCTCCCTTCCTCACACCCCGTCCGGCTTTCAGTTTTGTTCTGTGACT-AGCCCTCCCCCA chr4 - 94230402 26617183 26617182 26617265 67613138 67613137 67613220 83 CTCCACCTACTCA-CCTTCCACCACCTCCTTTCCTCCCACCCCCTCCAACTGTCAGTACTGCTCCGCCTCTGATTCCTCCTCCA .......:xx.x.-.....:.:.......:......x......x...::..x.....x:..:..:.:xx..-.x:.....:... 13M1D57M1I12M 60/82 73.2% 83/94230402 0.0% 2/82 2.4% 139905039 50309516 +3057 chr4 + 190214555 166535711 166535710 166535757 47 AAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGAGCCAGCA chr4 - 94230402 53800431 53800430 53800477 40429926 40429925 40429972 47 AATGAAAAAAAAAAAAAAAGGAGAGAGCAAGGGAGAAGGAGCGAGCA ..x:...............:.......x:..:.....x....x.... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 112735280 77479275 +3195 chr4 + 190214555 166535714 166535713 166535750 37 AAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAATGA chr4 - 94230402 87676347 87676346 87676383 6554020 6554019 6554056 37 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAA ...............:...................:. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 78859367 NA +3176 chr4 + 190214555 166592810 166592809 166592936 127 AAATTCTAATTACAGA--AATTTTTAC-AAGTAAAATTACATGTTGGTAACTT--------TATTTTTTCCTCTTTCT-CTCTATTTTTCTTTCTCTCTCCCTCCCCCCTCCTCTTTCTTTTCCTCTCTTTAGTATACT chr4 - 94230402 72415563 72415562 72415701 21814702 21814701 21814840 139 AAATTCTTATTTCTGATTATCTCCTACCAAGTGAAGTTAATTTTTTGCTAGTTGTGTTTGATAATTTTCTCTCTTTTTGCTCTATATTTCTCTGGCTATTCTTTTATGTTTTTCTTTCTTTCCCTCCCTTTGGTGCTCT .......x...x.x..--.x:.::...-....:..:...xx.x..x.:x.x..--------..x....::......:.-......x.....:.xx..x.:.:.::x:x:.::.........:....:....:..::x.. 16M2I9M1I25M8I17M1I60M 86/127 67.7% 139/94230402 0.0% 12/127 9.4% 94177247 NA +3074 chr4 + 190214555 166603697 166603696 166603799 103 TAAGATTATGTCACATTAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAA chr4 - 94230402 79401141 79401140 79401243 14829160 14829159 14829262 103 TGAGATCTCATTTCTTTACAAATAAATAAAGTAGAAGAGGAACTGGAAGGAGTAAAAAGGAAAAAAAAAAAAAAAAAGTACCACACAGACAGAGAAGAAAGAA .:....:x::.:x.x...x...xx..x...:x.:..:.::..xx::..::.:x.....::.................xx.xx...x.x...:.:..:x..:.. 103M 64/103 62.1% 103/94230402 0.0% 0/103 0.0% 87202556 NA +3058 chr4 + 190214555 166603699 166603698 166603764 66 AGATTATGTCACATTAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 21686235 21686234 21686300 72544103 72544102 72544168 66 AAATTAAGCCACATTAAAAAACAAAAAACAAAAAAAAAAACCCACTAAACTAGCAAACAAAATAAA .:....x.:...........:.......x...........xxx.xx...xx.:x...x....x... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 144917464 45297091 +3159 chr4 + 190214555 166603702 166603701 166603805 104 TTATGTCACATTAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACA chr4 - 94230402 52803409 52803408 52803512 41426891 41426890 41426994 104 TTATGCC----TAGAAAGGTCATAAAGAGAGAAAAAAGTTAGGATTGCATGGAAAAAAAAAAAAAAAAGAATGATATAAAAACTGGTACACAAAATCAGAAAAGAGCA .....:.----..:....xxx.x...:.:.:......:xx.::.----.x::................:..x:.x.:......x::....x....x..:...:x.:.. 7M4D33M4I60M 69/100 69.0% 104/94230402 0.0% 8/100 8.0% 113800293 76414262 +3041 chr4 + 190214555 166603714 166603713 166603797 84 AAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAA chr4 - 94230402 59152577 59152576 59152660 35077743 35077742 35077826 84 AGGAAGCATGCCAGAAGAACAATGAAAATAAATTTAGAAGGAAAAAAAAAAACCAAAAAACAACACGAAAGACAAACAACCAAA .::.....x:xx.:..:..x..x:....x...xxx.:..::...........xx.........x.xx...x.....x..x.... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 107451137 82763418 +3077 chr4 + 190214555 166603715 166603714 166603772 58 AAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 7711349 7711348 7711406 86518997 86518996 86519054 58 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA .......:.....:...........:......xx:...x..:.:.:::.:::..:... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 158892366 31322189 +3148 chr4 + 190214555 166603725 166603724 166603794 70 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAAC chr4 - 94230402 78376854 78376853 78376923 15853480 15853479 15853549 70 AAAAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAACAGCGAAGTCAGGAATAAAGAAAC .............x..xx.x.:....x......x..x..x......x.:.:..:x..::x.:...:.... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 88226871 NA +3533 chr4 + 190214555 166603735 166603734 166603819 85 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACAAAAACCAA chr4 - 94230402 70496300 70496299 70496384 23734019 23734018 23734103 85 AAAATAAGGGGGAAAAAACCACACACAACACAAAACACACACACACAAACAAAAAAAACAAATAAACAACAACAACAAAAGCCAA ....x..:::::......xx.x.x.x..x.x....x.x...x.x.....:.x......xx..x..:..............:.... 85M 61/85 71.8% 85/94230402 0.0% 0/85 0.0% 96107435 94107120 +3023 chr4 + 190214555 166603746 166603745 166603797 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAA chr4 - 94230402 64558420 64558419 64558471 29671932 29671931 29671983 52 AAAAAACAAACAAACAAACAAAAAAAAACCAAAACAAGTGTATAAAAATAAA ......x...x...x...x..........x.......:.::.x.....:... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 102045326 88169229 +3077 chr4 + 190214555 166603753 166603752 166603811 59 AAAAAAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACA chr4 - 94230402 51634638 51634637 51634696 42595707 42595706 42595765 59 AAAAAAAAAAAAAAAAAAAGGCAGCAACAACAACAAAAAAATCCAGAGTATTGACAGCA ...................::..:x.....xx.........:xx.:..:.x::...:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 114969115 75245440 +3330 chr4 + 190214555 166603757 166603756 166603819 63 AAAAAAAAAAAAAAAAACAAAAACAAATACAAAAAAACAAAAAGCAACAACAACAAAAACCAA chr4 - 94230402 59611715 59611714 59611777 34618626 34618625 34618688 63 AAAAACAACAAACAGAAAGCAAACAAAAACAAAAAAACCAAAAGCAACCAGAATAGAAGCCAA .....x..x...x.:..x:x.......x..........x.........x.x..:.:..:.... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 106992042 83222513 +3260 chr4 + 190214555 166665496 166665495 166665569 74 ATATATGGATATATATGGATATATATGG----ATATGTATGGATATATATGGATATATATGATATATATGGATATATA chr4 - 94230402 31221359 31221358 31221431 63008972 63008971 63009044 73 ATATATGAA-----ATGTACATACTTGGTTTTGTATGTATGGATATATATGGATATATAAAACATACATGCATGTTTA .......:.-----...x.:...:x...----:..........................x:.:...:...x..:.x.. 9M5D14M4I46M 56/69 81.2% 73/94230402 0.0% 9/69 13.0% 135444137 54770418 +3205 chr4 + 190214555 166694956 166694955 166695032 77 AAGATAAGATCAATGGATATATATATATATATATATATATATATATATATAAAATGTGTATAGAAGGTGTAT-ATATA chr4 - 94230402 2570403 2570402 2570479 91659924 91659923 91660000 77 AAGGTAAGA-AAATAAACATTTGAATATACATATATAAATATAAATATATGAAGAGTGAGTAGAATGTGCATGATATA ...:.....-x...::.:..x.:x.....:.......x.....x......:..:x...x:.....x...:..-..... 9M1D62M1I5M 58/76 76.3% 77/94230402 0.0% 2/76 2.6% 164124553 26090002 +3011 chr4 + 190214555 166701709 166701708 166701783 75 TGACACAGAAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAATACCTGAGACTATATAAGGT chr4 - 94230402 45758365 45758364 45758439 48471964 48471963 48472038 75 TGACCCAAAGAAAGTACTACATGGCAAAAAGAAAAAGAAAAAAGAAAGAAAGAAATACCAGTGTGGTTAAAAGGT ....x..:.:.:.x.x.xx.x:::x.....:.....:......................x.x.xxxx..x..... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 120943344 69271211 +3315 chr4 + 190214555 166729320 166729319 166729399 80 TAAGGTGAG-AATTAATCTCATACCTATTTCACTGATGAGAAAACTAAGCCATGGAGATGTCAAGTAACTTGCCTAAAGTC chr4 - 94230402 10729182 10729181 10729262 83501141 83501140 83501221 81 TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC .:....::.-.....x.x...xx:.:....:..x.:..:.......:..x..::x.x.x..:......:.....:.:.... 9M1I71M 56/80 70.0% 81/94230402 0.0% 1/80 1.2% 156000138 34214417 +3270 chr4 + 190214555 166752513 166752512 166752599 87 TCTATATATAGCAGCTATATATAGAGTAGCTATATGTGTGTATATATATATATATATATATACA--CACACACACACACACACACACAC chr4 - 94230402 14964799 14964798 14964884 79265519 79265518 79265604 86 TTTATATAGAGGTGTTGTGGACA---CAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:......x..xx.:.:.:x.:.---:.:x...:.x..:..:.::.:.::.:...:........--........::............. 23M3D38M2I23M 59/84 70.2% 86/94230402 0.0% 5/84 6.0% 151787714 38426841 +3434 chr4 + 190214555 166752530 166752529 166752603 74 TATATAGAGTAGCT----------ATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964801 14964800 14964884 79265519 79265518 79265602 84 TATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .........xx.:.----------......x..::.:.::.:.::.:...:....:...xx........::............. 14M10I60M 55/74 74.3% 84/94230402 0.0% 10/74 13.5% 151787729 38426826 +3296 chr4 + 190214555 166752537 166752536 166752617 81 AGTAGCTATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACATAT chr4 - 94230402 4481673 4481672 4481753 89748650 89748649 89748730 81 AGGGACTGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACAT ..x::..:.......x.x:.....x:.:.:.:...:.:....x...:.....:x....:..x.xx...:.:.:::...:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 162270864 27943691 +3011 chr4 + 190214555 166752543 166752542 166752600 58 TATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACA chr4 - 94230402 8395805 8395804 8395862 85834541 85834540 85834598 58 TAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x.::...:.x..:....:...::x..:..xx.:.................x..... 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 158356738 31857817 +3517 chr4 + 190214555 166752543 166752542 166752617 75 TATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACATAT chr4 - 94230402 8395791 8395790 8395865 85834538 85834537 85834612 75 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .:.:.:.....::...x.:..:...x..:...:::.::.x:...:xx.:.................x.....x.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 158356752 31857803 +3647 chr4 + 190214555 166752543 166752542 166752618 76 TATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395795 8395794 8395870 85834533 85834532 85834608 76 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:....::..x.:..:...x..:....:..::.x:...:xx.:.................x.....x.::x... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 158356748 31857807 +3869 chr4 + 190214555 166752543 166752542 166752619 77 TATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACATATAT chr4 - 94230402 8395793 8395792 8395869 85834534 85834533 85834610 77 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT .:........:...x.:..:...x..:....::.::.x:...:xx.:.................x.....x..:x.. 77M 56/77 72.7% 77/94230402 0.0% 0/77 0.0% 158356750 31857805 +3074 chr4 + 190214555 166752544 166752543 166752598 55 ATATGTGTGTATATATATATATATATATATACACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:....:.x..:....:...::x..:..xx.:.................x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 158356736 31857819 +3197 chr4 + 190214555 166752545 166752544 166752597 53 TATGTGTGTATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 14964832 14964831 14964884 79265519 79265518 79265571 53 TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .::.....:.:.::.:...:......:.xx........::............. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 151787713 38426842 +3125 chr4 + 190214555 166776422 166776421 166776457 36 AAAACAAAAAAACAACAAACAAACAAACAAAAAACA chr4 - 94230402 40371513 40371512 40371548 53858855 53858854 53858890 36 AAAAAAAAAAAACAACAAACAAACAAACAAAAAACA ....x............................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 126404909 63809646 +3338 chr4 + 190214555 166781377 166781376 166781514 138 TTTGGGAGGAGGAGGCA----GAGGATGATAAGGAGAAAGAGAAGAAAATAAAACAGAGGAGGAGGAGGAGGAAGAGAGAAGACAAAGGAGGAAGAAGAAGAAGGTGAAAAGGAGTAGGAGGAAAACAGAACTTAATAGAGC chr4 - 94230402 56708872 56708871 56709006 37521397 37521396 37521531 135 TTTGGGAAAAAAAAAAAAGGGGGGGGGGAAAAAAAGGAAATCAAGAAAATAACACATAGGAGGGAGAGGGGAAGTATAAAAGGACAAGAAAGAATCAGA-------TAAATGCAGAAGATGAGATCCAAAGTTCAATAAAGC .......::.::.::x.----.:..:x..x..::..:..:xx..........x...x......::....:.:.:x.x.:...:xx...:.:...xx...-------x...x.x..x..:x.::.xx..:.::.:....:... 17M4I78M7D36M 82/131 62.6% 135/94230402 0.0% 11/131 8.4% 110072505 80142050 +3017 chr4 + 190214555 166788177 166788176 166788230 54 ATTTAAAAAACAAACAAACAAACAAACAAAAAAACCCAGAAATCATAAATTTAT chr4 - 94230402 64540518 64540517 64540570 29689833 29689832 29689885 53 ATTTAAAAAACAAACAAACAAACAAAAAAAAAAAACCCAACACTA-AGATTTGT ..........................x.......x..x:.x.::.-.:....:. 45M1D8M 44/53 83.0% 53/94230402 0.0% 1/53 1.9% 102247659 87966896 +3629 chr4 + 190214555 166817974 166817973 166818068 95 ATGACTTAGGTTACTAT-TATAATGTTCATTTTTTTAAATTAAAAAAGATTCAAAGAGTTAAATAATATGTCCAAGATTACACACTTATCACTTTT chr4 - 94230402 65010018 65010017 65010113 29220290 29220289 29220385 96 ATAAATCATATTATTATCTGTAATATGAATTATTTTAAATAAAAAAAGATGCAAGGATGCAATTACTATGTTCAAGAGGACAAATTTAGTTCTTTT ..:.x.:.x:...:...-.:....:.xx...x........x.........x...:..xx:..x..x.....:.....xx...x.:...x:x..... 17M1I78M 68/95 71.6% 96/94230402 0.0% 1/95 1.1% 101807956 88406599 +3346 chr4 + 190214555 166872050 166872049 166872114 65 AAACATACACACACACACACACACACATATATATATATAATCTTAAGTATTTT---------AATTATGACAAA chr4 - 94230402 71167192 71167191 71167265 23063138 23063137 23063211 74 AAAAAAAAAAATACACACACACACATATATATATATATAATTACAAGTATTCTTGCACAAGGGCTTATGACAAA ...x.x.x.x.:.............:...............:x:.......:.---------:x.......... 53M9I12M 53/65 81.5% 74/94230402 0.0% 9/65 13.8% 95704858 NA +3864 chr4 + 190214555 166918394 166918393 166918489 96 GCCTCCTATCCAAATACTAACCAGGCCCAGCCCTGCTTAGCTTCCTAGATCAGAAGAGGTCAGATAGGTTCAGGGTGGTATAGAATTAGGCTGTAG chr4 - 94230402 91940506 91940505 91940594 2289809 2289808 2289897 89 GCTTCCCATCCAAGCACTGACCTGGCCCAATCCTGATTAGCTTATGAGATCTGAGAAGGTC--ACAGCTCGGAGGTGGTGTGG-----GGCTGCAG ..:...:......::...:...x......::....x.......x:x.....x..::.....--.:..x.:x::......:.:.-----.....:.. 61M2D20M5D8M 65/89 73.0% 89/94230402 0.0% 7/89 7.9% 74977888 NA +3030 chr4 + 190214555 166937731 166937730 166937795 65 ATATATATTTTTTCTTTTTTCTATTTTTTTTTCTTTTTTTTTTTTGAGACGGAGTGTCACTCTGT chr4 - 94230402 76182406 76182405 76182470 18047933 18047932 18047997 65 ATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGT ....::x......x.:x.:.::.x........x............:...x::..x..:::..... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 90755325 NA +3031 chr4 + 190214555 166947564 166947563 166947618 55 ATTCCAATTACAGTATCATTGGCAATTTAAAAAAAAGAAAAACGTAACAGTTTTT chr4 - 94230402 72155512 72155511 72155566 22074837 22074836 22074891 55 ATTCTATTTTCAATATAATTGGCAAATTAAAAAAAAAAAAAGCATGACAATATCT ....:.x..x..:...x........x..........:....:.:.:...:.x.:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 94792052 NA +3158 chr4 + 190214555 167010514 167010513 167010557 44 TGTCTCAAAAAAAAAAAAAAAAAAAATCCAGACACATCCATATT chr4 - 94230402 5298750 5298749 5298793 88931610 88931609 88931653 44 TGCTTCAAAAAAAAAAAAAAAAGAAATCCACACGCAACCATATT ..::..................:.......x..:..x....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 161711764 28502791 +3077 chr4 + 190214555 167037480 167037479 167037523 44 TCAAAAAAGAAGAAGAAAAAAAAAAAAAAAACTATTTTACAGGA chr4 - 94230402 38232135 38232134 38232178 55998225 55998224 55998268 44 TCAAGAAATGAGAAGAAGAAAAAAAAAAAAACAAGTTTACAGGA ....:...x:.......:..............x.x......... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 128805345 61409210 +3327 chr4 + 190214555 167038641 167038640 167038707 67 TGCATGT----TTTGTTTATTTTTTCCAAAAAAAAAAAAAAAAAAAAAAATCAGAATGCTAAAGCCAGAAA chr4 - 94230402 63117905 63117904 63117975 31112428 31112427 31112498 71 TGTATGTAGAATCTATTCATCTTTTACAAAAAAAAAGAAAAAAAAACAGATGAGAGTGTTTAAATTAGAAA ..:....----.:.:..:..:....x..........:.........x.:..x...:..:.x..:::..... 7M4I60M 51/67 76.1% 71/94230402 0.0% 4/67 6.0% 103920736 86293819 +3278 chr4 + 190214555 167116798 167116797 167116937 140 CATAAATACACATATAGAT--GTATATATATAAAAGTATATATATACTTTTATATATATACTTTTGTATATAGATATACTTTTGTATATATACATATATACTTTTGTGTGTGTGTGTGTATATATATATATATATATACTTT chr4 - 94230402 40224598 40224597 40224716 54005687 54005686 54005805 119 CAGAATTAAACACACAAACTAGCACATGTATAAAGCTA-----ATACTTATACATATGTAACTTTTTGTGCAACAGGAC------------------AGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTT ..x..x..x...:.:.:.:--.:.:..:......:x..-----......x..:....:..x:...x.:.::.:xx:x..------------------.x.:..:.............:.:........x...:....::x.. 19M2I17M5D36M18D45M 81/117 69.2% 119/94230402 0.0% 25/117 21.4% 126892200 63322355 +3307 chr4 + 190214555 167116892 167116891 167116944 53 TATACTTTTGTGTGTGTGTGTGTATATATATATATATATAT-----ACTTTTGTGTAT chr4 - 94230402 19559286 19559285 19559343 74671060 74671059 74671117 58 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ...x:....x.............:................:-----.:......:... 41M5I12M 46/53 86.8% 58/94230402 0.0% 5/53 9.4% 147557606 42656949 +3141 chr4 + 190214555 167116894 167116893 167116946 53 TACTTTTGTGTGTGTGTGTGTATATATATATATATATATAC-----TTTTGTGTATAT chr4 - 94230402 19559286 19559285 19559343 74671060 74671059 74671117 58 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ..:....x.x...........:.:.................-----x...x....... 41M5I12M 46/53 86.8% 58/94230402 0.0% 5/53 9.4% 147557608 42656947 +3310 chr4 + 190214555 167122026 167122025 167122179 154 CCTCCCTGCCTCCCTCCCTTCCTTC---CTCCATCCCTCCCTCCCTCTTTTCTTTTCCTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTTTTTCTTTTTTCTTTTGTTGTCTTTTTCTTTTCTCATTCTCTCTCTCTCTCTCTTTCTCTCTCT chr4 - 94230402 43081887 43081886 43082008 51148395 51148394 51148516 122 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTT-----------------------------------TCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCT ......:.x.x.x............---..:..xxx:x.:x......:...-----------------------------------.:..:........:.:x:.:.::..xx..:x....xx....x.x::...x.:...:.....:......... 25M3I23M35D71M 83/119 69.7% 122/94230402 0.0% 38/119 31.9% 124040139 66174416 +4303 chr4 + 190214555 167122037 167122036 167122179 143 CCCTCCCTTCCTTCCTCCATCCCTCCCTCCCTCTTTTCTTTTC----CTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTTTTTCTTTTTTCTTTTGTTGTCTTTTTCTTTTCTCATTCTCTCTCTCTCTCTCTTTCTCTCTCT chr4 - 94230402 92912908 92912907 92913054 1317349 1317348 1317495 147 CTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCTGCTCT .:...:.....:...::.x.xx...x:.:..x...:..x...:----x..........:...:......::.::..:...xx.:..x:.:.x:.x....:xx......:..:x.:..:.x::.x.x.x:......x:.::::x.... 43M4I100M 89/143 62.2% 147/94230402 0.0% 4/143 2.8% 74209129 NA +3129 chr4 + 190214555 167122047 167122046 167122128 82 CTTCCTCCATCCCT-CCCTCCCTCTTTTCTTTTCCTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTTTTTCTTTTTTCT chr4 - 94230402 8141238 8141237 8141320 86089083 86089082 86089165 83 CCCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .::.:....:.::.-.:x..:......::.x...x..:.:::.x.:....:....:.:...:..x.x......:.:..:.:.. 14M1I68M 53/82 64.6% 83/94230402 0.0% 1/82 1.2% 158980809 31233746 +3305 chr4 + 190214555 167122079 167122078 167122146 68 CCTTTCTTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTTTTTCTTTTTTCTTTTGTTGTCTTTTTCTTT chr4 - 94230402 16390123 16390122 16390190 77840213 77840212 77840280 68 CCCTTGGTTTCTTTTTTCTTTTTTCTTTTTTTCCCAATTGTATTTTTAGTTCTGTTGTTTGTTTGTTT ..:..xx...............:....:.:...:.xx..x.x.....xx..:......:.x...x... 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 150731956 39482599 +3106 chr4 + 190214555 167122085 167122084 167122133 49 TTTTCTTTTTTCTTTTCTCTTCTCTTCTCTTTTTTCTTTTTTCTTTTGT chr4 - 94230402 60688300 60688299 60688348 33542055 33542054 33542103 49 TCTTTTTTTTTTTTTTTTCCTCTCTTCTCTTTCCCCGTTCTTCCTTTGT .:..:......:....:..:............:::.x..:...:..... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 106433785 83780770 +3017 chr4 + 190214555 167153576 167153575 167153648 73 ATATAGATCATTTTTATTACCATAGAAAGTTTTACTGGACAACACTCTATATCATTACCTTAAAAATCTTAAG chr4 - 94230402 19120120 19120119 19120192 75110211 75110210 75110283 73 ATTCAAAGTATTTTTATTTCCAACGGAAGTTTTATTTGACAACTCCCTCTCTCACTACTCTTTAACTTTTAAG ..x:.:.x:.........x...xx.:........:.x......x.:..x.x...:...::.xx..x.:..... 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 148033456 42181099 +3148 chr4 + 190214555 167186628 167186627 167186661 34 AAAAACAAAAAACAAACAACAACAACAAAAAAAA chr4 - 94230402 16619863 16619862 16619896 77610507 77610506 77610540 34 AAAAACAAAAAACAAACAACAACAACAAAAAAAA .................................. 34M 34/34 100.0% 34/94230402 0.0% 0/34 0.0% 150566765 39647790 +3228 chr4 + 190214555 167186630 167186629 167186680 51 AAACAAAAAACAAACAACAACAACAAAAAAAACAGAAAACAAATCTCTATT chr4 - 94230402 66785743 66785742 66785793 27444610 27444609 27444660 51 AAAAAACAAACAAACAACAACAACAAAAAAAACACCAAACAACCTTCTCTT ...x..x...........................xx......x::...x.. 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 100400887 89813668 +3208 chr4 + 190214555 167194087 167194086 167194136 50 TCTTTTTCATTTTCTGTTCAGTTGGTTCCTTTGTTTGTCTCACTTTAAAC chr4 - 94230402 91425600 91425599 91425649 2804754 2804753 2804803 50 TCTCTTTCGTTTCATGTTCAGTTGATTCCTTTGTCTGTCACAGTTAAAAC ...:....:...:x..........:.........:....x..x..x.... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 75768487 NA +5017 chr4 + 190214555 167205434 167205433 167205622 189 TATAATATAATATATATTATATAAATATATAGAATTTATTTTATATATAATATATAATATATAATATATATTA---TATAATATATATTATATATATTATTATATA-ATATATATTATATAATATATAATATATATTATATATATAATATAATATAAAATATATTTTCTATAATATATATAAAATATCTATAT chr4 - 94230402 30253314 30253313 30253493 63976910 63976909 63977089 180 tataatataatgtcta------aaatatatataatttaaaataaatatcaaataatttatGTTAGTCATATAAAACTGTAGTATATAGTCTATA-GTTAAAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATAT---ATGCATGGCATATTACATATGT---ATGTCTTTAT ...........:.x..------.........x......xxx..x....x.x...xxx...:.x.xx:....x.---.:..:......x.x....-:...xx..x..-..:......:..x.....:..:...........x...:x...:.....---..::..xx:x...x.:....:.---..:...x... 16M6D51M3I18M1D11M1I48M3D22M3D10M 130/176 73.9% 180/94230402 0.0% 17/176 9.7% 136952120 53262435 +3058 chr4 + 190214555 167222600 167222599 167222693 94 CACATATGTTATATATTTATATATAAACATAGATATATATTATATATTCATATATAAATATATAAACATAGATATATATTTATATATGAATATA chr4 - 94230402 30587862 30587861 30587955 63642448 63642447 63642541 94 CACCAGTGTTCATTTTTTGAATGTAAATAAGTATACAAATTTTATCTCTATATTTTAATATATGTACATGGAGATATGTGTATAGAGGTATATA ...xx:....xxx.x...:x..:....:.x:x...:.x...x...x.::....x.x.......:x....:..x....:.x....x.x.x..... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 136634738 53579817 +3119 chr4 + 190214555 167222818 167222817 167222876 59 TATATAAACATAGATATATATTGATATGTGAATATATAAATATATAAACATAGATATAT chr4 - 94230402 28944776 28944775 28944834 65285569 65285568 65285627 59 TATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGACATAT ....x.x...:.:........x.......:x....:......xx.x.....x..:.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 138278042 51936513 +3048 chr4 + 190214555 167222858 167222857 167222918 61 TATATAAACATAGATATATATTGATATATGAATATATAAATATATAAACATAGATATGTTT chr4 - 94230402 28944776 28944775 28944836 65285567 65285566 65285627 61 TATAGACACACAAATATATATAGATATGTATATATGTAAATAATTCAACATTGACATATTT ....x.x...:.:........x.....:.:x....:......xx.x.....x..:..:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 138278082 51936473 +3047 chr4 + 190214555 167257176 167257175 167257243 68 ATACTACATACTACATACTTTGTATGTAGATACATACATATGTAGATACATACTACATAGTTTATCTC chr4 - 94230402 87222173 87222172 87222240 7008163 7008162 7008230 68 ATAATGAATAGTAAATAAATAGTACATAGTAAAATACATATGTAAATATATACTATATAATTTATTCC ...x.:x...x..x...xx.x...::...xx.x...........:...:......:...:.....::. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 80035003 NA +3082 chr4 + 190214555 167286968 167286967 167287046 79 CTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCACCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:x.:xx.x..:.:.......x.:xx...x.xx.x........:............:......--.::x...... 67M2D10M 55/77 71.4% 77/94230402 0.0% 2/77 2.6% 149089842 41124713 +3266 chr4 + 190214555 167288090 167288089 167288146 57 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAAAT chr4 - 94230402 13027546 13027545 13027602 81202801 81202800 81202857 57 ttCCTTTGTTTTTTTTTTTTTTTTTCCTCTCTTCTGCTTCTCCTTTGTTTATTAAAT ..::...x.................::.:.:..:.....::.x....:..:x..... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 154260544 35954011 +3187 chr4 + 190214555 167289488 167289487 167289531 44 TTCTTTTTGTTGTTGTTGATGCTGTTGTTGCTTTCTGTATGTTT chr4 - 94230402 79867754 79867753 79867797 14362606 14362605 14362649 44 TTTTTTTTGTTTTTGTTGATGTTGTTGTTGCTTTTTGCATTTTT ..:........x.........:............:..:..x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 87421734 NA +3277 chr4 + 190214555 167327573 167327572 167327640 68 CATCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAACCTAATTGCATG chr4 - 94230402 27271411 27271410 27271478 66958925 66958924 66958992 68 CATCATTTCTGAAAGAAACAAAAGTAATGAGAAAGAAAAAAAAAACAAAAGAGAGACTTCATTATACG ......:..x:...:...x....:x..x:.:...:..........x....::..:..:.x...::.:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 140056162 50158393 +3505 chr4 + 190214555 167375043 167375042 167375147 105 TTTTACACATACATATATATTTATGAATAGTTTATATATCTATGTATAACCAAACACACA------------------CACACATATATACATTTATATATATATA-TATATATATTCTGTTTA chr4 - 94230402 22514784 22514783 22514907 71715496 71715495 71715619 124 TTTCGAATTTAAAGATCAATTCATGGTTCTTTTATGTATCTATGTATACACAAACACAAAGATATGTACAAATGTTTGCAAGTACATATGCATGAatatatatatattatatatattgtgtata ...::x.:x..x.x..xx...:...:x.xx.....:............xx........x.------------------..x::.:....:...xx...........-..........x...x.. 60M18I28M1I17M 78/105 74.3% 124/94230402 0.0% 19/105 18.1% 144860259 45354296 +3822 chr4 + 190214555 167375853 167375852 167375931 79 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:.::........:.x...x.xx.x........::.............:....--.......... 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 149178727 41035828 +3197 chr4 + 190214555 167406557 167406556 167406677 121 TATATAAAT------ATATAAATATATAAATATATAAATATATATTTATATATTAAATATATAAATATATATTTATATATTAAATATATTTATTTCTATATACATTTATATATAAATGTATAAATAT chr4 - 94230402 19992804 19992803 19992918 74237485 74237484 74237599 115 TATATAAAATCACTAATGTAAATCTATAGATATATTAACATAGACTATTAGATTAAGTAAATGCATGTATCTACATGAATTTAATATA---AATTAGATATACA---------AAATGACTGAATAT ........x------..:.....x....:......x..:...x.:.xx..x.....:..x..:x..:...x.x:..:x...x......---.x..xx.......---------.....xx.:..... 9M6I73M3D13M9D14M 81/109 74.3% 115/94230402 0.0% 18/109 16.5% 147413753 42800802 +3133 chr4 + 190214555 167464449 167464448 167464521 73 TATATACACACATATATGTGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACTT chr4 - 94230402 57691380 57691379 57691452 36538951 36538950 36539023 73 TATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTT ....:x::.x.x::..x...:...:.::.x.......:..:x..........:..x....:x...x....:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 109773069 80441486 +3028 chr4 + 190214555 167464461 167464460 167464511 51 TATATGTGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x..x.:....:...:........:....x.x....:.:......... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 119374964 70839591 +3090 chr4 + 190214555 167464462 167464461 167464510 49 ATATGTGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...:..:......xx:..:x....................x:....... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 163058039 27156516 +3100 chr4 + 190214555 167464462 167464461 167464523 62 ATATGTGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACTTCC chr4 - 94230402 53500328 53500327 53500389 40730014 40730013 40730075 62 ACACACGCAGAGGCACATACGTGTGCATGTGTGAGTGCATATATATCTGCATATGTACTTTC .:.:::.:.x.x:.....::.....::......x...:........x.::....:.....:. 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 113964134 76250421 +3316 chr4 + 190214555 167464465 167464464 167464523 59 TGTGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATACTTCC chr4 - 94230402 32959568 32959567 32959626 61270777 61270776 61270835 59 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTC ......:x..:.....x....x.....::...:.......:.......:.x...:x.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 134504897 55709658 +3227 chr4 + 190214555 167464467 167464466 167464509 43 TGTATATACACATGTGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089505 48089504 48089547 46140856 46140855 46140898 43 TGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...........:.......:....x.x......:......... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 119374962 70839593 +3190 chr4 + 190214555 167464478 167464477 167464540 63 ATGTGTGTGTGTGTGTGTGTGTATATATATATATATATAT-------ACTTCCTATGCTGTAGATGATAA chr4 - 94230402 89821281 89821280 89821350 4409053 4409052 4409122 70 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTAGCTTTAGACAACAA ..........x.x.......................:..:-------.::..:.xx...x....::.:.. 40M7I23M 50/63 79.4% 70/94230402 0.0% 7/63 11.1% 77643197 NA +3174 chr4 + 190214555 167480868 167480867 167480927 60 ATTTCCCAGTCTTGTTTTTTGTTTTTTTTTTTTTTGTTTTTAGATATAGCACTGTGAGAA chr4 - 94230402 17907222 17907221 17907279 76323124 76323123 76323181 58 ATTTGCCGGTCTTGTTTTTTCTTTTTTCTTTTTTTGTTTTT--GTAAAACATCATCAGAA ....x..:............x......:.............--:..x.:..:::.x.... 41M2D17M 47/58 81.0% 58/94230402 0.0% 2/58 3.4% 149573646 40640909 +3027 chr4 + 190214555 167518160 167518159 167518208 49 GTGACAAGAGTGAAACTCTGTCTCAAAAAAACAAAAAACAAAACAACAA chr4 - 94230402 21020087 21020086 21020135 73210268 73210267 73210316 49 GTGGCAAGAATGCAACACTTTTTAAGAAAAACAAAAAACAAAACAAAAA ...:.....:..x...x..x.:.x.:....................x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 146498073 43716482 +3024 chr4 + 190214555 167518183 167518182 167518226 44 CAAAAAAACAAAAAACAAAACAACAACAACAACAAAACTAAAAC chr4 - 94230402 4027221 4027220 4027262 90203141 90203140 90203182 42 CAAAAAAAAAAAAAACCAAACAACAACAACAACAAAA--AAAAC ........x.......x....................--..... 37M2D5M 40/42 95.2% 42/94230402 0.0% 2/42 4.8% 163490962 26723593 +3326 chr4 + 190214555 167536366 167536365 167536574 209 AAGTATTTTCACACACACACACACACAAACACGTATATATATATATATATATATATATATACAGAA-----GCACAT-ATATATGTATATACACACAAATATATT-----CTTAA------------ACTTTAAAGAATCTATAAGGAACT-----------TAAACAATTCAATGA----GTAAAAAATAAATAACTCCATTAAAGATTGGGCAAAAAACATAAACAGATTTGTCTCAAAAGAAAA chr4 - 94230402 87372738 87372737 87372979 6857424 6857423 6857665 242 AATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAATTATGCCCAGAACAGATACTTATAC-CATAAATACTTTGCCACCTGAAGTCTGACTGCTTATTTTAATTCATATACTAAGAACTACAATAGGCACTAGAAAAATCAAACACATTTTAGAAGACAAATAGTCGCAGCTGG----GGATAAGGAATATAAATAGGATGACATCAAATGAAAA ..x.....:..x...........x...x....:.x....::...:..::.......x.x.xx..:.-----..x..x-.:.x..::x.....-..:.....:x..-----..x..------------.:.....xxx..x..:x.:.....-----------..:.x..x....xx.----x..:..:.:.....:::x..x:x::----..::..::..:.....:..:x.x::x.....x..... 66M5I6M1I14M1D12M5I5M12I24M11I15M4I25M4D37M 137/204 67.2% 242/94230402 0.0% 43/204 21.1% 80163628 NA +3101 chr4 + 190214555 167555076 167555075 167555166 91 CTTGTATGTGTATATATGTATATGTATATGTATGTGTATATACATATACATACATGCATGCGCACACACACACAC-----ACA--TACTCACAAATTG chr4 - 94230402 24136188 24136187 24136285 70094118 70094117 70094215 98 CTAGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACACCCTTGACAGCTACTAACAAAGTG ..x.x.....:......:.x....x.xx...x.:.:..:...:.:.....x...x:..x:.:....:.:x:....-----...--....x.....x.. 75M5I3M2I13M 65/91 71.4% 98/94230402 0.0% 7/91 7.7% 143418888 46795667 +3074 chr4 + 190214555 167555078 167555077 167555149 72 TGTATGTGTATATATGTATATGTATATGTATGTGTATATACATATACATACATGCATGCGCACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:...:.::..:x.:......x.::..:.....::x:.:..xx.....::..::.:......x..... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 159159287 31055268 +3028 chr4 + 190214555 167555109 167555108 167555164 56 GTGTATATACATATACATACATGCATGCGCACACACACACACACATACTCACAAAT chr4 - 94230402 28470365 28470364 28470414 65759989 65759988 65760038 50 GTACATATGTATACACAGACATGTATGC------ACACACATACATACTCACAAAT ..::....::...:...x.....:....------.......:.............. 28M6D22M 42/50 84.0% 50/94230402 0.0% 6/50 12.0% 139084744 51129811 +3220 chr4 + 190214555 167570206 167570205 167570278 73 TCTTTTCCATAGTTCCTCATTACAACTGAAATTTTATATATATATATATATATATATATATTTTTTTTTTTTA chr4 - 94230402 4200242 4200241 4200314 90030089 90030088 90030161 73 TTTTTACAATGCTACATTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCA .:...x.x..:x.x.x.:x:...x.x.:.....xx............:.:.:..............::...:. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 163369964 26844591 +3142 chr4 + 190214555 167604183 167604182 167604240 58 TAACATATATATGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089490 48089489 48089547 46140856 46140855 46140913 58 TGACTTCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x.x.:..x..x.:......:::........:....x.x........:....... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 119514693 70699862 +3037 chr4 + 190214555 167604188 167604187 167604238 51 TATATATGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x:.x........:.:........:....x.x........:.:..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 119514691 70699864 +3213 chr4 + 190214555 167604198 167604197 167604257 60 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATAGTAGAAAAAG chr4 - 94230402 4406424 4406423 4406483 89823920 89823919 89823979 60 TACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAAGTCAGAAAAAG ..::.....:.:xx.:.:x....................x:.......x:x:........ 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 163197774 27016781 +3039 chr4 + 190214555 167624959 167624958 167625037 79 TTTGCTACTGACACAAATCTAAAATATTTAAAAAATATTTTAATTGTGGTAAAATGCACATAAACACATTTGCCATCTT chr4 - 94230402 1639700 1639699 1639778 92590625 92590624 92590703 79 TTTGCAACTAACAAAACAGTAAAATACACAATAAAGGTTTTACTTGTTGAAGAATGCAGAAAAGCACGTTAGTTAGCTT .....x...:...x..xxx.......:x:..x...x:.....x....x.x.:......x.x..:...:..x.::.x... 79M 55/79 69.6% 79/94230402 0.0% 0/79 0.0% 165985259 24229296 +3218 chr4 + 190214555 167642795 167642794 167642850 56 TATCAAAAACAAAACAAAACAAAACAAACAAACAAATAAACAAACAAAACCTTCCA chr4 - 94230402 24484765 24484764 24484820 69745583 69745582 69745638 56 TATTAAAAACAAACCAAAGCAAAATAAACAATCAAAGAAATTAACAAAAAAATCCA ...:.........x....:.....:......x....x...:x.......xxx.... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 143158030 47056525 +8837 chr4 + 190214555 167662985 167662984 167663162 178 AGAATGTAAAGGCTATCTGGCTGCGACATCTGTCACCTCATTGATCGCCAGGGTTGACACGGCTGATCTGGCTGGCTAGGTAGGTGTCCCCTTTCTCCCTCACCGC--------------------AGCT----------TCAGGAGGGATGCTCCT-----------------------------------------GGAGCTGTGCTGCCCTGCTAGAACCTCAAAACAAGCTCTCAAGAAAAAAAA chr4 - 94230402 69279861 69279860 69280107 24950296 24950295 24950542 247 aGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACGGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAG--CTCAAGAAATTAAA ..:....:.:...x.......................:........:..........:x:.....................:......:....:...:........--------------------....----------..:::::...:.x:.:.-----------------------------------------.x.....:...x...............x.......--.........xx... 106M20I4M10I17M41I35M2D14M 148/176 84.1% 247/94230402 0.0% 73/176 41.5% 98383124 91831431 +3665 chr4 + 190214555 167718468 167718467 167718583 116 CAAGCTTGTTCAACCCATGGCCCACAGTCCACATGTGGCCCAGGACGGCTTTGAACATGGCCCAACACAAATTCGTAAACTTTCTTAAAAGA----------------CTATGAGTTTT-TGTTTTTTTTTGT chr4 - 94230402 48654658 48654657 48654788 45575615 45575614 45575745 131 CAGGCATATCCAACCCATGATCCACAGACCACATGAGGCCCAGCACAGCTTGCAATTTGG--Caacctaaattggtgtgttattttcacaaaaacaaggtcacatatcctactggttttatgtttttgttcat ..:..x.:.:.........::......x.......x.......x..:....xx..:x...--....x:.....x..:x::.x.:..x.x.:.----------------...:x:.....-.......x..::. 60M2D30M16I11M1I13M 82/114 71.9% 131/94230402 0.0% 19/114 16.7% 119063810 71150745 +3150 chr4 + 190214555 167746663 167746662 167746726 64 TTTATCT-ATATGTGTGTGTGTATATATATATATATGGCTCTGTAAAAACTTAAATAAAATAGTA chr4 - 94230402 85036773 85036772 85036833 9193570 9193569 9193630 61 TTTATATCATATGTGTGTGTGTATATATATATATATAGGTTTGTAAGCAC----AGAAAGCAGTA .....x.-............................:.x.:.....:x..----.x...::.... 7M1I42M4D11M 51/60 85.0% 61/94230402 0.0% 5/60 8.3% 82709890 NA +3037 chr4 + 190214555 167748829 167748828 167748881 53 AAAAAAAAAAAAAAAGCCAAAAAGCAGTAGTTTGCAATGATCCAACATTTCCT chr4 - 94230402 57964878 57964877 57964930 36265473 36265472 36265525 53 AAAAAAAAAAAAAAAGACTAAAAGCAGAAGTTTAAAATGAATAAGCATTCTCT ................x.x........x.....:x.....x:x.:....::.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 109783951 80430604 +3063 chr4 + 190214555 167768987 167768986 167769075 89 TTTTAGAAGCTCAATTC------TGGTTTTTGTTTGTTTTTGTTGGCATGTTTGTTTGCTTGTTTTCTTTTTTTTTTTTTTTTGCTCTTTTATTT chr4 - 94230402 16595545 16595544 16595628 77634775 77634774 77634858 84 TTTTACAAGTCTAAGCCACAAGGTGATTTCTGTATG-----------ACTTTTGTTTGCTTGTTTTCTTTTTTTTTTTTTTGCATTTTTTAAATT .....x...:::..x:.------..:...:...x..-----------.:x...............................x:::.:...x.x.. 17M6I13M11D48M 60/78 76.9% 84/94230402 0.0% 17/78 21.8% 151173442 39041113 +3224 chr4 + 190214555 167780587 167780586 167780675 89 CAGCTACAAATTTATTGCATAGGAAAAATTTGGCTATATATGTGTGTATACATACATACATACATATATATTATAATTATATATAAATT chr4 - 94230402 57268327 57268326 57268415 36961988 36961987 36962076 89 CAGAGACACAAGTGTTTCATGACCAAATTTTTGATATAAATATTTCTATGTGTACATACATAAATAGATATAATAGTTCTATATATATT ...xx...x.xx.:..x...::xx...x...x.x....x..:.x.x...:::..........x...x....x...:..x......x... 89M 62/89 69.7% 89/94230402 0.0% 0/89 0.0% 110512260 79702295 +3052 chr4 + 190214555 167804493 167804492 167804558 66 AGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAA chr4 - 94230402 48273074 48273073 48273139 45957264 45957263 45957329 66 AGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAAA ..:::....x...:.:::x.......::x..x:.x.:..x:...:.:...............:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 119531419 70683136 +3282 chr4 + 190214555 167804509 167804508 167804619 111 AAGAAAGAAAGAAAGAAAGAAAGAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAGAAA-CAAAGAAAGAAAAA--------AGAAAAGAAAGAAAGGAA chr4 - 94230402 44400475 44400474 44400594 49829809 49829808 49829928 120 AAAAAACAAAGTGTGTGTGTGAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA ..:...x....x:x.x:x.x:..:.:::..::..:..::..:.......::..............x:.:x.:...x..:-..x.....:x::..--------......:xx...:..:.. 79M1I14M8I18M 72/111 64.9% 120/94230402 0.0% 9/111 8.1% 123404034 66810521 +3655 chr4 + 190214555 167804542 167804541 167804657 116 GAAGGAAAAGAAAGAAAGAAAAAAGAAAGAAAAAGAAAGAAAGAAACAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAGAACAGAGAGAGAGGGAGGGAGGGAGG--GAGGAGGGAGG chr4 - 94230402 91538038 91538037 91538155 2692248 2692247 2692365 118 GGAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGG .:..::x.....:....x:.x::.........x.:.:.:...:.x:..xx.x...x.:...:x.x.........x.::..x:.:xx...:..x:.xx:.x.....--.....:..... 105M2I11M 75/116 64.7% 118/94230402 0.0% 2/116 1.7% 76266504 NA +3048 chr4 + 190214555 167804562 167804561 167804615 54 AAAAGAAAGAAAAAGAAAGAAAGAAACAAAGAAAGAAAAAAGAAAAGAAAGAAA chr4 - 94230402 27809321 27809320 27809374 66421029 66421028 66421082 54 AGGAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAA .::......:::....x:....x...x:......x.....:........:.... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 139995241 50219314 +3356 chr4 + 190214555 167804565 167804564 167804676 112 AGAAAGAAAAAGAAAGAAAGAAACAAAGAAAGAAAAAAGAAAAGAAAGAAAGGAAGAACAGAGAGAGAGGGAGGGAGGGAGGGAGG---------------AGGGAGGGAAGGGGAAAGAAAGAAAG chr4 - 94230402 59127727 59127726 59127853 35102550 35102549 35102676 127 AGAAAGGGAAGAAAAAAAAAAATCGAAGGAGCAGAACAGTCACCAAAGACTGCAGACACAGAGAGAGTGGAATGGAGTGAGAGGAAGAATACAGAAACACCAGAGTGTGAAAGGGAGATAAAGAGGG ......::..::...:...:..x.:...:.:x.:..x..xx.xx.....xx.x.::x..........x..:.x....x...:.:::---------------..:.x.x...:....:.x.....::. 86M15I26M 73/112 65.2% 127/94230402 0.0% 15/112 13.4% 108676838 81537717 +3308 chr4 + 190214555 167804609 167804608 167804661 53 AAAGAAAGGAAGAACAGAGAGAGAGGGAGGGAGGGAGGGAGGAGGGAGGGAAG chr4 - 94230402 60222237 60222236 60222289 34008114 34008113 34008166 53 AAATAAAGAAGGAACAAAAAGAGTGGGGGGGAGGGGGGGAGGAGAGAGTAGAG ...x....:.:.....:.:....x...:.......:........:...x::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 107582372 82632183 +3290 chr4 + 190214555 167870492 167870491 167870570 79 ATGTGTATGTGTGTGTATATATATGTATGTGTATATATATGGGTGTATGTGTGTATACACACACATGTATGTATATATG chr4 - 94230402 8395788 8395787 8395866 85834537 85834536 85834615 79 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ......:.:......:...x.:......x.::....:....xx.::..xx:.::.:.........:::.x::.:.x... 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 159474704 30739851 +3006 chr4 + 190214555 167870630 167870629 167870681 52 ATATATGTGTGTGTGTGTATATATATATATATATTTGTGTATACACACATAC chr4 - 94230402 65364581 65364580 65364632 28865771 28865770 28865822 52 ATGTATGTGCTTGTCTGCATATAGATACATATATATGTGCATACACACGCGC ..:......:x...x..:.....x...:......x....:........:::. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 102506049 87708506 +3762 chr4 + 190214555 167898910 167898909 167899033 124 GAGAGAGAAAGAAG----AAAAAGTAAGAAAGA-AAGAAGAGAGAGAGAGAAAGAGAGAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAAAAGAAAGGAAGGAAGGAAGAGACATGAGAAG chr4 - 94230402 25255591 25255590 25255719 68974684 68974683 68974812 129 GGGGGCAAAAGAAGCTGCAAAAATTAGAACAGATGGGAAGACAGGGAAAGCAGAATATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAAGAGTAG .:.:.x:.......----.....x..::.x...-::.....x..:..:..x.::.x.x.x.::....xx...x::.:.....x.x:...:.....:....:.....:.xx:.:...x...x.x...x.. 14M4I15M1I95M 82/124 66.1% 129/94230402 0.0% 5/124 4.0% 142643319 47571236 +3280 chr4 + 190214555 167898946 167898945 167898999 54 GAGAGAGAGAAAGAGAGAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAAA chr4 - 94230402 27809323 27809322 27809376 66421027 66421026 66421080 54 GAGAAAGGGGAAGATGGAAACAAAAGAAGAAATAAAAAGGAAAAGAAGGAAAAA ....:..:.:....x:....x....:......x...:.:.:......:...... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 140089623 50124932 +3006 chr4 + 190214555 167898948 167898947 167899007 60 GAGAGAGAAAGAGAGAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAAGAAAAAGAAAAGAA chr4 - 94230402 64058084 64058083 64058143 30172260 30172259 30172319 60 GGGAGAGAAAAAGAGAAAGCAAAACAAAAACAAAGTAGGAGAGTGGGGAGAAGTAAGTAA .:........:........x....x.:...x....x....:..x::.:.:...x..:x.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 103840864 86373691 +3131 chr4 + 190214555 167904908 167904907 167904987 80 GCTATACCTATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATGTGTGTGTGTGTATTGCATATATAC chr4 - 94230402 19559284 19559283 19559362 74671041 74671040 74671119 79 GCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATATTCTtgtggtgggttcacac .....x::.x.x..............................:.xx..-..x.x...:.:.x:x...:x..x:.x:.:.. 48M1D31M 57/79 72.2% 79/94230402 0.0% 1/79 1.3% 148345624 41868931 +3151 chr4 + 190214555 167904910 167904909 167904974 65 TATACCTATATGTGTGTGTGTGTGTATATATATATATATATATATATATATATGTGTGTGTGTGT chr4 - 94230402 32959570 32959569 32959634 61270769 61270768 61270833 65 TGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT .:........::..x....x......::.:::......:.......:.x....:.x::..xx... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 134945340 55269215 +4048 chr4 + 190214555 167905058 167905057 167905157 100 ATACGCATATATGTATATATACACACACATATATGCATATATGTATATATACACACACATACACGCTTATATGTATATACACACACACATACACATATAT chr4 - 94230402 68558028 68558027 68558124 25672279 25672278 25672375 97 ATATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTTTTCTCTTTATGC---CATATATACATATATAT ...:...:.:.x.:..::...::.::::....:.......xx...x..x.....x.........::..x.x.x.x...:.---..:.:.....:...... 80M3D17M 68/97 70.1% 97/94230402 0.0% 3/97 3.1% 99347030 90867525 +4141 chr4 + 190214555 167905105 167905104 167905228 124 TATACACACACATACAC---------GCTTATATGTATATACACACACACATACACATA--TATGTATATATACACACACACATACACATATATGTATATATACACACATATACACATATATACACATATGTATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.....x....x.x..---------.:x.::...:....x..:.....:.......x.--:...x:..:....::.:.x::.:..:x:.......:x:..:.:.:.x...::.x..:.x.x.....:....... 17M9I33M2I74M 83/124 66.9% 135/94230402 0.0% 11/124 8.9% 94784030 NA +3168 chr4 + 190214555 167905124 167905123 167905235 112 TTATATGTATATACACACACACATACACATATATGTATATATACACACACACATACACATATATGTATATATACACACATATACACATATA-TACACATATGTATATATACAC chr4 - 94230402 4417345 4417344 4417457 89812946 89812945 89813058 113 TTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ...x.::................:.x:x.:...:.:..:x:x::x::....::..:xx.x::..x..x.........:..x..:x:....:-:...x.:.:xx.:.....x.. 91M1I21M 69/112 61.6% 113/94230402 0.0% 1/112 0.9% 163487779 26726776 +3791 chr4 + 190214555 167905133 167905132 167905256 124 TATACACACACACATACA-------CATATATGTATATATACACACACACATACACA----TATATGTATATATACACACATATACACATATATACACATATGTATATATACACACATATACACATATATGTATA chr4 - 94230402 73121075 73121074 73121209 21109194 21109193 21109328 135 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.....x....x.x..x-------.:.:.:::.::....x..:.....:.......----:..:x...:...:::.:.x:..:..:x:.....:::x:..::....x....:.x..:.x.x...:.:....... 18M7I32M4I74M 80/124 64.5% 135/94230402 0.0% 11/124 8.9% 94784058 NA +3100 chr4 + 190214555 167905181 167905180 167905247 67 CATATATGTATATATACACACATATACACATATATACACATATGTATATATACACACATATACACAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..........::..:.........:.....:.:...:x:.x:.x:.x:.:..:...xx:....:... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 101000335 89214220 +3615 chr4 + 190214555 167905210 167905209 167905332 123 ATATATACACATATGTATATATACACACATATACACATATATGTATATATACACACATATACACATATATGTATATATACACACATATACACATATGAATATATACACACATATATACATATA chr4 - 94230402 89016082 89016081 89016198 5214205 5214204 5214321 117 ATGTGCACACATCTGCATGCACACACACGTTTGCGCA------CACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..:.::......x..:..::.:......:.x.:.:..------:.:.:..:..x.:::......:..x....:.:.::.x....x.:::....:.:.:..:::.:.x..::x::.:..x.::. 37M6D80M 69/117 59.0% 117/94230402 0.0% 6/117 5.1% 78889128 NA +3080 chr4 + 190214555 167905217 167905216 167905283 67 CACATATGTATATATACACACATATACACATATATGTATATATACACACATATACACATATATGTAT chr4 - 94230402 66904846 66904845 66904912 27325491 27325490 27325557 67 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ..:.......::..:.........:.....:.:..:.x..x:.x..x:::......xx:...:.:.. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 101000371 89214184 +3610 chr4 + 190214555 167905292 167905291 167905434 143 ACATATACACATATGAATATATACACACATATATACATATATGTATATATACACATACATATATGTATATATACACACCTATACATATATGTATATACACACATATGTATATACACACATATACATATATGTATATATACACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC---TGCTGCTGTGCCCATATCCACA .::.::......x..x..::.:......:.x.:::..:.:.::.::.x..:..:.:..:..x....:.:.::.x....:.:::..:.:.:.x..:::::.x...:x.:.:.:x::...---.:.xxx.:..:x:....x.... 118M3D22M 78/140 55.7% 140/94230402 0.0% 3/140 2.1% 78889210 NA +3059 chr4 + 190214555 167905318 167905317 167905382 65 ACATATATACATATATGTATATATACACATACATATATGTATATATACACACCTATACATATATG chr4 - 94230402 48167041 48167040 48167105 46063298 46063297 46063362 65 ATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG .:....xxx..............x...:.:.::x.:....::x:.......:x..:....:.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 119738277 70476278 +3002 chr4 + 190214555 167905375 167905374 167905436 62 CATATATGTATATACACACATATGTATATACACACATATACATATATGTATATATACACATA chr4 - 94230402 66904846 66904845 66904907 27325496 27325495 27325557 62 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATA ..........::........:..::.:.:.....:..x..x:.x:.x..:....:.xx.... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 101000529 89214026 +3282 chr4 + 190214555 167905381 167905380 167905448 68 TGTATATACACACATATGTATATACACACATATACATATATGTATATATACACATATATACATATATG chr4 - 94230402 48167038 48167037 48167105 46063298 46063297 46063365 68 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG ........:xxx.....:.:....:.x.....:.::x.:....::x:........:..:....:.... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 119738343 70476212 +3094 chr4 + 190214555 167905393 167905392 167905440 48 CATATGTATATACACACATATACATATATGTATATATACACATATATA chr4 - 94230402 25493134 25493133 25493181 68737222 68737221 68737269 48 CATATTTATTTACCCATACATACATATATGTACATATACAGGTATATA .....x...x...x..:.:.............:.......x:...... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 142412259 47802296 +3022 chr4 + 190214555 167905513 167905512 167905562 50 CTATGTGTGTGTATATATGTGTGTGTATGTGTGTGTATATAGATATATAT chr4 - 94230402 43600821 43600820 43600870 50629533 50629532 50629582 50 CCATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATAT .:....x.......x..::.........:::.:.x.......:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 124304692 65909863 +3241 chr4 + 190214555 167913808 167913807 167913861 54 AAAAAAAAAAAAAAAGAGAAAAGAACTCAAACAAATTTACAAGAAAAAAATCAA chr4 - 94230402 35079908 35079907 35079961 59150442 59150441 59150495 54 AAGAAAAAAAAATAAGAGAAGAGAAAGAAAACAAAATCACAAGCAAAAAACCAA ..:.........x.......:....xxx.......x.:.....x......:... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 132833900 57380655 +3373 chr4 + 190214555 167921648 167921647 167921695 48 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGGCCAATCAGTAGCAGAGAA chr4 - 94230402 76845961 76845960 76846008 17384395 17384394 17384442 48 AAAAAAAAAAAAAAGAGAGAGAGAGAGAGACCAATAAATGTCAGTGGA .............................:.....x.:.:x...x.:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 91075687 NA +3046 chr4 + 190214555 167958186 167958185 167958242 57 TTGCACATGCACACACACACAGAAAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAGA chr4 - 94230402 67652081 67652080 67652137 26578266 26578265 26578322 57 TTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..x....:.:...x...:...x.xx:.:...:.:.:.....:.............:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 100306105 89908450 +3413 chr4 + 190214555 167962545 167962544 167962630 86 TTGACCAGAAATTTGTGCTCTCTCTTTCTAAACATACATATATATATACACACATGTATGTATATATATATACACACATATATGTA chr4 - 94230402 52487141 52487140 52487223 41743180 41743179 41743262 83 TTGAAAAAGGATTTGTA---TCATTTTTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCA ....xx.:::......:---..x:...:....:::...........x.:...x........:......x..xx.x.:.:..:..:. 17M3D66M 59/83 71.1% 83/94230402 0.0% 3/83 3.6% 115475404 74739151 +3548 chr4 + 190214555 167962576 167962575 167962684 109 ACATACATATATATATACACACA-----------TGTATGTATATATA-----TATACACACATATATGTATATATATATACACACATACATGTATATATATACACACATATATATACACACACA chr4 - 94230402 14964761 14964760 14964883 79265520 79265519 79265642 123 ACAGAAATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTG--CACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...x.x..::..x.:.....x..-----------..:..x......x.-----.:.:x.....x......x.:::.:.:--.....:.::.........:.xx......:..::.:......... 23M11I14M5I26M2D44M 77/107 72.0% 123/94230402 0.0% 18/107 16.8% 152997815 37216740 +3235 chr4 + 190214555 167962597 167962596 167962678 82 CATGTATGTATATATATATACACACATATATGTATATATATATACACACATACATGTATATATATACACACATATATATACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACA------TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....:.....:.:.::...x...------.....x..:....::.::.x.....xx...:.:.:.......:.:.x.:... 24M6D52M 54/76 71.1% 76/94230402 0.0% 6/76 7.9% 159566810 30647745 +3262 chr4 + 190214555 167962643 167962642 167962715 73 CACATACATGTATATATATACACACATATATATACACACACATGTATACATATATACACATATATATACATAT chr4 - 94230402 71630131 71630130 71630203 22600200 22600199 22600272 73 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGT ...x...:..:..::...........:.x.......:.:x:x.....:...:.:.x::...:.:x...::.:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 96332512 93882043 +3144 chr4 + 190214555 167962653 167962652 167962719 67 TATATATATACACACATATATATACACACACATGTATACATATATACACATATATATACATATTTGT chr4 - 94230402 7596414 7596413 7596480 86633923 86633922 86633989 67 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:.x..::.:...x..:...........:..........x.:...:..x..:::.::..:::.::. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 160366239 29848316 +7383 chr4 + 190214555 167989958 167989957 167990503 546 TTTCCTTTGTTGATTTTCTTTATTCCAGGTGATGGCAGTAAAGGACCTTTGCTCTATCTATA---AGAATGAAATAACGAAGTTAAAAGACTTAAACTTCTCCCATACATGAAAAGTCGCTCCCTGCTTGCTGGATGACACACACATCCCTACACATAAACACACCACACTCACTAAAGGAATGTGCAAAGAGAGGGAAATTATTAAAATGGCAATATATTTGTT-----AATTTTCATAAATAACAA----GGTGTGTGTTTTT-GTTCCATTTATTATCTGTTTTTTTGTCTGTAACATTTTAGTATAAG-TTTCA--ATTCATTTATATAATTTACTGAACTAGTAGAAATATATTTC---ACCTTTGGCATTTTAAAGTGCACCTGAATAAAAAGAATACATTATTTTCTTTTCAGGGATAGGTGAGACTTCAATAAAGCTGTTTAGTTCAAATTTGTCGTGTAAGGTAGATGGCACCAGAGCTGTGTTATGTCAATGGCAGTTTTCAAATGAAAAACATTACATTAAGCCTTGAGCATGCCATCTGGAATTGCAATAAGT chr4 - 94230402 68249264 68249263 68249781 25980622 25980621 25981139 518 TTCCTTTTGCTAGTTTCATTTACTCCAGGTGATGGCAGTAAAGGACCTTTGCTCTTTCACTACATAATGTGAAGTGCAGAAATCTA-----TCAGACTCCACC--TCCAAAGGAGGTCATTCCCG--TTCCT--------------TCCTTGCAGCTTATCAAG--ACATCCATTGTGAGATGGAAAAACAAAATGG-----CTTGGATTGGAGGTGGTTTTTTTCCTTCATTCTTAATAAATAATAAATATGGTATATATTTTTCATTTGCCTTTGTATGGGTCTTTCACACTGC-ATATTCTAGTATAATCTTTCAATATGCATACATACAATGCAATTA--CAGT----GTTTATTTTTGGACTTAAGAAATTTCAAGCTGCCTCTGGTTGTTGA----ACATAGGTGTGTAAACAGAGACAG--AGTATCCCAGTAAAGCTGTTTGTCTGGGACTTGTCAC-TCAGGGAGATGGC-TAACAGCAATGTTACGTCAA--AAAGTTTCAAAATGAAAAGCCTTGCAGTGAGCCTGGAATATACCTACTGGAACTGGAACAAAT ..:.:....:.::...:x....:................................x..xx..---.:x:....:.:xx...:.:x.-----.:.:...:.x..--.x..x:::.:...::....x--..x..--------------...:.:..xx.x.x..x:--...::..:.:x::..xx.x:x..x:.:.x..-----x..::.x...x::.:xx...x..-----.x.:..x........:..----...:.:.:.....-:..:xx:..xx...xx..:...:xxx...:-.:...:........x-.....--..x...x:...:...x:.x.x.--:...----:.x.....:---..:.xx.:x....:..:x...x:...:x.:xx:.----....x:x.x.x.xxx...:..:..--::x.:::..:...........:x:.x::.:.....::-.x...x.......-:x.x...x:.....:.....--:x.....:x.........:.x..:..x.:.....x..::..:..xx......:..x..:..:. 62M3I21M5D12M2D20M2D5M14D18M2D31M5D23M5I18M4I13M1I30M1D15M1I5M2I22M2D4M4D9M3I34M4D24M2D37M1D13M1D20M2D63M 323/499 64.7% 518/94230402 0.0% 66/499 13.2% 99740694 90473861 +3411 chr4 + 190214555 167994615 167994614 167994679 65 TCTTGGTGGATTACTTTTTACTATGGCTTTTTTTTTTTTTTTTTTTTGAGATAGAGTCTTGCTCT chr4 - 94230402 41770348 41770347 41770412 52459991 52459990 52460055 65 TTTTGGTGGAGTCCTTTTTGCTGTGGTTTTTTTTTTTTTTTCCCTTTGGCTTAATGTTTTGGCCT .:........x.x......:..:...:..............:::....:xx..:x..:...x:.. 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 126224267 63990288 +3066 chr4 + 190214555 168005183 168005182 168005240 58 TTACGTGTGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATAT chr4 - 94230402 70982624 70982623 70982681 23247722 23247721 23247779 58 TTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ..x.x...........:........:....:.x:...x..:.:.:.::...:.:.:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 97022559 93191996 +3003 chr4 + 190214555 168005190 168005189 168005242 53 TGTGTGTGTGTGTGTGTATATATATGTATATATATATATATATATATATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:.....:..:......x:...x..:.:.:.::...:.:.:.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 97022561 93191994 +3594 chr4 + 190214555 168005192 168005191 168005281 90 TGTGTGTGTGTGTGTATATATATGTATATATATATATA----TATATATATATATATATATATATATATATATGATTGAGTACAAAA---AAACTAC chr4 - 94230402 8395789 8395788 8395885 85834518 85834517 85834614 97 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTAC .......:......:...x.:......x..:....:..----..:..xx...:.:.:.:.:.:.:.:.x.:.::.x...:..x....---....... 38M4I45M3I7M 65/90 72.2% 97/94230402 0.0% 7/90 7.8% 159609403 30605152 +3125 chr4 + 190214555 168017995 168017994 168018048 54 ATTTGTTCTGTGTCTCTTTTTTTCTGAACAAAGAAGGATTTTGAAGATGTAGGT chr4 - 94230402 35638745 35638744 35638798 58591605 58591604 58591658 54 ATTTTTCCCGTGTTTCTTTTTTTCTGGATAAAGAAGACATTTGATGATTTGGGT ....x.:.:....:............:.:.......:xx.....x...x.:... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 132379250 57835305 +3434 chr4 + 190214555 168060697 168060696 168060772 76 TGGTGGGTTTTTTTTTCCTTTTTTGGTACATGATTATTTAATTAGATGCCATCATTGCATTTATTATGTTTTTAAC chr4 - 94230402 81682504 81682503 81682579 12547824 12547823 12547899 76 TAGTGGTTTTTTTTTTTTTTTTTTGGTATGTAATTAGTTATTTATGTCCCATTAATGGTGCAATTATGTTTTCGGC .:....x.........::..........::.:....x...x...x:.x....:.x..xxx:x..........:::. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 86378193 NA +3010 chr4 + 190214555 168096895 168096894 168096985 91 ATTACTAATACAAATGCATATATATATATATATATGTATGTATATGTATATACAATACATACATAAGCATATATGTATGTGTATATATACA chr4 - 94230402 28370652 28370651 28370742 65859661 65859660 65859751 91 ACTACGGGTATGAATGCATATATAAATATATCCACATATAACAATGACAATACAAAAAATGCGTATGCAATTGTGTATACACGCATATTCA .:...x::..::............x......x:.::...:xxx...xxx......x.x..:.:..x...xx.:.....::::::....x.. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 139726243 50488312 +3034 chr4 + 190214555 168101476 168101475 168101542 67 TTCTCTTTTCTTTGTGTTTTTTTTGGGGGGGAAGGGGACGGGGGGAAGCTTTTCCTTACTTACAGCT chr4 - 94230402 67837423 67837422 67837488 26392915 26392914 26392980 66 TTATCTTTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGACGGAATATTTTCCTTAC-TACAGTT ..x......:...x.x.........:.:.:..::.:..x:.:x....xx..........-.....:. 59M1D7M 49/66 74.2% 66/94230402 0.0% 1/66 1.5% 100264053 89950502 +3203 chr4 + 190214555 168115457 168115456 168115521 65 TCTTTCTTACTGCCT---TTCCATCCCTCCCTACAATACACACGCACACACACACACACACACACACA chr4 - 94230402 32106683 32106682 32106750 62123653 62123652 62123720 68 TCCCTCTTACATCTTGTTTTCCTTCCCTCCCCACTTTTCATGTGCACACACACACACACGCACAAACA ..::......xx.:.---....x........:..xx.x..:::................:....x... 15M3I50M 50/65 76.9% 68/94230402 0.0% 3/65 4.6% 136008774 54205781 +3012 chr4 + 190214555 168121800 168121799 168121872 73 AGCTTTTTTGTTTGTTTGGTTTTGTTGTTTGGTTTTGTTTTTTGTTTTGTTTTTGTTTTTCTGAGACGGAGTC chr4 - 94230402 36797106 36797105 36797178 57433225 57433224 57433297 73 AACCTCTTTTTTTGTTGGGTTTGTTTGTTTGGTCTTGCTTTTCCTCTTTTCCTTGTGGTTCTTTAAAAGAATC .:.:.:...x......x.....xx.........:...:....:x.:..x.::....xx....xx:.x:..:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 131324694 58889861 +3177 chr4 + 190214555 168152648 168152647 168152759 112 AGGTACAAGGACAGAAGGGAAACTCGCTTGGAGGCT--ATTATATATACATAATAAATAAGTAAATTACATATATATATATGTATCGCCTCCCAGCAATTCTATTTATATAAAA chr4 - 94230402 72042931 72042930 72043031 22187372 22187371 22187472 101 AAGTGCAATAGCAGAA----ATTTGGATTGAAAACTTGAATGAAAATACTTAATAAATGAGTAAATTACATATATATATATATAC---------ACACATTTACTTATTCAAAA .:..:...x::.....----.x:.x.x...:.::..--.x.:x.x....x........:......................:..:---------:..xx.:..:....x:.... 16M4D16M2I47M9D20M 72/99 72.7% 101/94230402 0.0% 15/99 15.2% 96109717 94104838 +3297 chr4 + 190214555 168153352 168153351 168153465 114 TCCCTCTTTTCTGCTTATCACTAGAGAGAGAAACTAAAAACCATGGCTTCA--AGCTGCTAAAAGCCTAAAGCAAAAAAAAAAAAAAAAAAACAAAAACAAAAACAAAACAAAAAA chr4 - 94230402 41576856 41576855 41576969 52653434 52653433 52653547 114 TCCCTCTGGTCAGTGAATCACTTTGCAGAAAAAGTGAATCTCA--GCTTCACTGCCTGCTTAGGGCACAAAGTACCAAATTAAAAAAAAAAACAACAACAAAAAGCAGAAAACAAA .......xx..x.:xx......xx:x...:...x.:..xx:..--......--:x.....x.::..x:....:.xx...xx..............x........xx.:.x..x... 43M2D6M2I63M 78/112 69.6% 114/94230402 0.0% 4/112 3.6% 126576496 63638059 +3394 chr4 + 190214555 168153402 168153401 168153462 61 AAGCTGCTAAAAGCCTAAAGCAAAAAAAAAAAAAAAAAAACAAAAACAAAAACAAAACAAA chr4 - 94230402 4027201 4027200 4027261 90203142 90203141 90203202 61 AAGCTGATAATGTCTTAATACAAAAAAAAAAAAAACCAAACAACAACAACAACAAAAAAAA ......x...x:x.:...x:...............xx......x.....x.......x... 61M 49/61 80.3% 61/94230402 0.0% 0/61 0.0% 164126201 26088354 +3332 chr4 + 190214555 168153431 168153430 168153489 59 AAAAAAAAAAACAAAAACAAAAACAAAACAAAAAAAAAAACCAATAACAACAACAAAAT chr4 - 94230402 19094138 19094137 19094196 75136207 75136206 75136265 59 AAACAAACAAACAAAAAGAAAAACAAAACAAAAAACACCACCACCACCAACAAAAAGAT ...x...x.........x.................x.xx....x:.x......x..:.. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 149059293 41155262 +3118 chr4 + 190214555 168155828 168155827 168155942 115 TGATATATCATATATAATATAATATATCATATATGATATATCATATATTATATGTTATATATAATATATGATATATCATATATTATATTATATATCATATATTATATGTTATATA chr4 - 94230402 67847357 67847356 67847462 26382941 26382940 26383046 106 TGATGTTTTTTAT-TAATGTAA------GTGTAATGTATATTGTACATCAGAGATTGTAAACACTGTATTATAAATCATACATTGCATTATATATATTACA--ATACATTATGTA ....:.x.:x...-....:...------:.:..xx:.....::..:..:.x.x:..:..x.:.x.:...x...x......:...::.........xx..:.--...::....:.. 13M1D8M6D73M2D12M 73/106 68.9% 106/94230402 0.0% 9/106 8.5% 100308471 89906084 +3243 chr4 + 190214555 168156016 168156015 168156102 87 TATAATATATTATATATAGTATTATATTATATATTATATATTATATATCATATATTATATATATTATATATAATATTTATTATATAT chr4 - 94230402 48211465 48211464 48211546 46018857 46018856 46018938 82 TATCATAT-CTATACATACGACTA----ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT ...x....-:....:...xx.:..----.......x...:.xx.:...xx...x..x............::x........:...... 8M1D15M4D59M 63/82 76.8% 82/94230402 0.0% 5/82 6.1% 119944551 70270004 +3694 chr4 + 190214555 168156134 168156133 168156272 139 TATATATAAAAATAATATATATTATATATTATATATATTATATTATATATTATATATTATATATAATATATATTATATTATATGTAATATGTATTATATTATATATAATAGTATATATTATATATAATGTATATATTAT chr4 - 94230402 48211474 48211473 48211579 46018824 46018823 46018929 106 TATACATACGACTAATATATTCTATGTACTGTATAT-------TATCTTTTATATATTATATGCCATA--------------------------TTTATCATATATCACAGCATATACCATATACGATCTATGAATCAT ....:...x:.x........x:...:..:.:.....-------...x.x.............::x...--------------------------.x...:......x.:..:.....::.....::..x...:x..:.. 36M7D25M26D45M 79/106 74.5% 106/94230402 0.0% 33/106 31.1% 119944660 70269895 +5848 chr4 + 190214555 168156284 168156283 168156453 170 TATATTATATTATATTATATATAATAGTATATATAATATATAATA--TATTATATAGTATATAT--GTTATATAATATATTATATAGTATATATAATATAATTAATATATAT---TATATTATATATTATATAGTATATATTATATATACTATATAATATATA------ATTTTATATATATA chr4 - 94230402 30253309 30253308 30253484 63976919 63976918 63977094 176 TGCattataatataatgtctaaaata---tatataatttaaaataaatatcaaataatttatGTTAGTCATATAAAAC----TGTAGTATATAGTCTATAGTTAAAATTTACATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTA .::......x....x.:.x..x....---........x..x....--...:.x...:.x...:.--..:......x.:----.:.........xxx....:....x..x..:---......:..x.x...:..............x....:...:.......:------..x...:....:.. 26M3D16M2I17M2I12M4D30M3I48M6I14M 127/163 77.9% 176/94230402 0.0% 20/163 12.3% 137902975 52311580 +3374 chr4 + 190214555 168156315 168156314 168156425 111 TATAATATATAATATATTATATAGTATATATGTTATATAATATATTATATAGTATATATAATATAATTA-ATATATATTATATTATATATTATATA-GTATATATTATATATA chr4 - 94230402 44197641 44197640 44197752 50032651 50032650 50032762 112 TACAATCTCCAATATATTATATAGTATATATAGTGCTTGGGATATAGTATAGTATTTATACTACAGATATGTACACATACTAACATACA-GACACACGCACACATTATTTATA ..:...x.x:.....................:x.::x.::x....x:........x....x..:.:x..-:..:.:..xx..x:...:.-x.:.:.-.:.:.:.....x.... 69M1I19M1D6M1I16M 76/110 69.1% 112/94230402 0.0% 3/110 2.7% 123958674 66255881 +3193 chr4 + 190214555 168166612 168166611 168166686 75 TTGGTTTGGTTTTGTGTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGAA chr4 - 94230402 81428414 81428413 81428488 12801915 12801914 12801989 75 TTATTTTATTTTAGTTTTTTGTGTGTGTGTGTGTGTATGGTCATGTATACGTACAATTGTGTTTGGATGTTTAAA ..:x...:x...x..x...:................:..xx::...:.::..:::xx.....x..x:.....:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 86738198 NA +3024 chr4 + 190214555 168188563 168188562 168188611 49 ATATATATATATATATATATATATATATATATATAGTGTGTGTGTGTGT chr4 - 94230402 60813626 60813625 60813674 33416729 33416728 33416777 49 ACATGTGTATACAGATATATATATATGTATATCCAGTGTCTGTGTGTAT .:..:.:....:.x............:.....x:.....x.......:. 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 107374937 82839618 +3817 chr4 + 190214555 168238320 168238319 168238542 223 GAAAGAATCTCTACTTACTATAAGGTTAATGGACTAGGAGGAGGAAGGGAAGGAAAAAAATAAGGAAGGGAAGGGAAAGGGAGGGGAGGGGAGGAGAGGGGAGGGAAGGGAAGGGAAGGGAA--GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGGAGAAAGGAAGAGGAAGGGAAGAGAGAGAAAAGGAAGAAGAGAGAAAGGAAGAAAGAG chr4 - 94230402 56098303 56098302 56098527 38131876 38131875 38132100 225 GAAAGTCTCAAAATTCATTGCAGAGATAAGCAGCAAGACAGTGAGAAGGGATGGAGATAACAAAGGAGATGTGTGACTGCATACAGAGAGGTGAGGTGGGCAAAGAAGAAAGGCTCTGAGAGCTGGGAAAAAGTCGGAAGAGCTGGGATCCAAACAGAAGGAATAGAGAGTCAAAAAGCAGGAAGAAAAAAAAGGAAAAGCAAGAGGGGGGAAAAAAGTCAAGAG .....xx..xxx.:.:.:.::.::.x...xx::.x..:x:.x.::.:..:.x.:.:.x..:..:.:..:x:x.x..xx.x:x:x:...:..x.::.x...x.::....::.:.xxxx.:..:--.....::::xx.....:.xx....xxx:..x:.....:.x:.:...xx.::...x:.:.:.:..:.:.::......x....:.:.:....::.:xx..... 122M2I101M 119/223 53.4% 225/94230402 0.0% 2/223 0.9% 112140017 78074538 +3126 chr4 + 190214555 168244712 168244711 168244757 46 AAGACTCTATCTCAAAAAAGAAAAGAAAAAAGAAAGAAAAAAAAAG chr4 - 94230402 61963814 61963813 61963859 32266544 32266543 32266589 46 AAGACTGTATTTAAAAACAGAAGGGAAAAAAGAAAAAAAAAAAAAG ......x...:.x....x....::...........:.......... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 106280898 83933657 +3140 chr4 + 190214555 168265803 168265802 168265867 65 GGAAAGAAGGGAGGGAAGGAGGGAAGGAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGG chr4 - 94230402 69066685 69066684 69066749 25163654 25163653 25163718 65 GGGGAGAGGGAAGGAGAGAAAAGAAAGAAGGACGGACGGGAAGAAAAGGGAGCGGGGGTGGGGGG ..::...:..:...::..:.::...:..:...x...x......::......:x..::.x.::... 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% 99199118 91015437 +3120 chr4 + 190214555 168285962 168285961 168286043 82 GAAAGAATGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAGGGAAGGAAGGATGGAGGGAGGAAGGAAGGAAAGA chr4 - 94230402 36858295 36858294 36858376 57372027 57372026 57372108 82 GAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....x.::x..x.....x...::...:.........:.x..x..xx.::.:::......x.:x:..::x...:..:....:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 131427667 58786888 +3270 chr4 + 190214555 168290290 168290289 168290346 57 TTCACTTCTCTTCATTTCTTTCTGTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 19466322 19466321 19466378 74764025 74764024 74764081 57 TTCAACTCTTTACATTTCTGACTGTTTTATCCCATTTTCTTTTCTTTTTTTTTTTTT ....x:...:.x.......xx.......x.:::x.........:............. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 148823968 41390587 +4040 chr4 + 190214555 168297260 168297259 168297382 123 AAAGAAAGAAAAAGAAAGAAAGAAAGAGAGAGAGAGAC---GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAG---GAGAGGAATAAAG ...x...:.::..........::.:.:......:....---....:.:x:..:.xxx:.:.x.....xx....x.:.::..x:.:....:.....:.:..x:xx:.....---..:..:..x.... 38M3I69M3D13M 80/120 66.7% 123/94230402 0.0% 6/120 5.0% 137764096 52450459 +3312 chr4 + 190214555 168297293 168297292 168297393 101 GAGACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGA chr4 - 94230402 61334696 61334695 61334796 32895607 32895606 32895707 101 GAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ..:x:......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:...x..:........ 101M 64/101 63.4% 101/94230402 0.0% 0/101 0.0% 106962597 83251958 +3157 chr4 + 190214555 168297301 168297300 168297384 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 131439007 58775548 +3166 chr4 + 190214555 168297302 168297301 168297397 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:.:.x..:........ 96M 61/96 63.5% 96/94230402 0.0% 0/96 0.0% 106962601 83251954 +3157 chr4 + 190214555 168297305 168297304 168297388 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.....:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 131439011 58775544 +3178 chr4 + 190214555 168297306 168297305 168297407 102 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGA-AAGACA chr4 - 94230402 61334701 61334700 61334803 32895600 32895599 32895702 103 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..::...:.x..:........-:..... 96M1I6M 66/102 64.7% 103/94230402 0.0% 1/102 1.0% 106962605 83251950 +3044 chr4 + 190214555 168297310 168297309 168297405 96 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x.:::...:.x..:........ 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 106962609 83251946 +3046 chr4 + 190214555 168297317 168297316 168297400 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..:..x.::..:.:.:.... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 131439023 58775532 +3010 chr4 + 190214555 168297321 168297320 168297410 90 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGACAATA chr4 - 94230402 36858294 36858293 36858383 57372020 57372019 57372109 90 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCA .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x.::..x.::..:.:.:....x..::. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 131439027 58775528 +3107 chr4 + 190214555 168317050 168317049 168317106 57 TCCGTCTCAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAAAAGAAAACCTGAAT chr4 - 94230402 49250042 49250041 49250098 44980305 44980304 44980361 57 TCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAAT ...xx:.x........:............:.x:......:......:..:x.::... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 119067008 71147547 +3006 chr4 + 190214555 168317193 168317192 168317243 51 CACATACACACACACACACATAAACACACACCCAACAGGACACACACATAC chr4 - 94230402 80495438 80495437 80495488 13734915 13734914 13734965 51 CATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACAC ..:...:.....x...x.:..:x...........:...x...x.....:.. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 87821755 NA +3312 chr4 + 190214555 168335149 168335148 168335221 73 CAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTAGAAGAGGAAGAATTGTCTTGGGCCACACATAAAA chr4 - 94230402 9885857 9885856 9885929 84344474 84344473 84344546 73 CAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ...::x.:.....:...:..x........:......x.:::x..:x.:.....::..x....::..:x...:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 158449292 31765263 +3071 chr4 + 190214555 168350805 168350804 168350871 67 AACTCCCATCTCAAAACAACAACAACAACAACAACAAAAAACCAACAACAACAAAAACAACAAAAAA chr4 - 94230402 51823599 51823598 51823665 42406738 42406737 42406804 67 AGCTTCTTTCTGAAGGCTGTGAGGAATACAACAAGAGATAACAAACAACAACAAAAACAACAAAAAA .:..:.:x...x..::.x:::.x:.xx.......x.:.x...x........................ 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 116527206 73687349 +3126 chr4 + 190214555 168350805 168350804 168350870 66 AACTCCCATCTCAAAACAACAACAACAACAACAACAAAAAACCAACAACAACAAAAACAACAAAAA chr4 - 94230402 42472507 42472506 42472572 51757831 51757830 51757896 66 AACTCCAAGTTCCTTACAAAATGAACAACAACAACAAAAAAGCCACAACAACAGAGGAAAAAAAAA ......x.x:..xxx....x.xx..................x.x.........:.::x..x..... 66M 50/66 75.8% 66/94230402 0.0% 0/66 0.0% 125878298 64336257 +4189 chr4 + 190214555 168350984 168350983 168351064 81 CATCACTTACTACAATCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAATAGCTGGGATTACAGGTGC chr4 - 94230402 18197117 18197116 18197197 76033206 76033205 76033286 81 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .....:x.x.....::.:xx:x..:.............x...x..x.x........::...:.......:.:....x.... 81M 60/81 74.1% 81/94230402 0.0% 0/81 0.0% 150153867 40060688 +3132 chr4 + 190214555 168358488 168358487 168358566 79 CTTCACACAGTTCTTCTTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTT chr4 - 94230402 52825895 52825894 52825972 41404431 41404430 41404508 78 CTTACCTCAGTGCTT-TTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTTATGACAAGCTTTAGCTTTATT ...xx.x....x...-...:.x:....:.....x...:....x.......:...x...:x....::x.:.x...:.:.. 15M1D63M 56/78 71.8% 78/94230402 0.0% 1/78 1.3% 115532593 74681962 +3430 chr4 + 190214555 168432235 168432234 168432382 148 ATATATATTGTGTGTGTGTGTGTATATATATATACACACATATATGTATAGTATAT-ATTGTATATAGAGATCTCATTCAAAATATATATTATATATAATATATAGATAGATCTCATT---CAAAATAGAACGTGTTTACAATGTAATATCT chr4 - 94230402 61428348 61428347 61428496 32801907 32801906 32802055 149 ATAGGTGTTGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTATCAATGGATAGAAAAAGATTTCTCCACATGCATTCTAT---TAACAGATGTAGAGAATTTACTGTACAAAATCAGAGAAGTCAAAACTTTAATGACT ...x:.:....:......:..:....:...............xx.x.x..:.:...-.x..x...x.:.:.xx.:x:..x.x..::..x:...---...:.x..:x.x...x:.:.:.---......x::.x:x..:x.x.x.x....:x.. 56M1I36M3D22M3I31M 94/145 64.8% 149/94230402 0.0% 7/145 4.8% 107003887 83210668 +3039 chr4 + 190214555 168432242 168432241 168432290 49 TTGTGTGTGTGTGTGTATATATATATACACACATATATGTATAGTATAT chr4 - 94230402 19559295 19559294 19559343 74671060 74671059 74671108 49 TTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATAT ...........................:.:...xx..xx.x.x...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 148872947 41341608 +3322 chr4 + 190214555 168432242 168432241 168432295 54 TTGTGTGTGTGTGTGTATATATATATACACACATATATGTATAGTATATATTGT chr4 - 94230402 40224676 40224675 40224729 54005674 54005673 54005727 54 TTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGT ..x...............:........x.:......:...x:.:....xx.... 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 128207566 62006989 +3085 chr4 + 190214555 168449610 168449609 168449682 73 TATAATAAAAAAAAAAAAACATTAAAACAAAAAAAAAAAATGCAAAAAAAAAAAAAGAAAAAAGAAAAAAATT chr4 - 94230402 86306139 86306138 86306211 7924192 7924191 7924264 73 TGTAAAACAAACAAACAAACAGCAAAACAAAACAAAAAAGTGAAATAAGTGAAAACAGAACTAGAAGAAAGTT .:...x.x...x...x.....x:.........x......:..x..x..:x:....x::..xx....:...:.. 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 82143471 NA +3253 chr4 + 190214555 168499058 168499057 168499242 185 GAAAATAATCCATGTGTATTTATTAAGAAATAAATTAT-AAAAT-----TGTAGTGCATTTTCTGCATCAAACATAAAATTTCATAAAATTTTCGTGTTTGACTTTTGCCCTAAAGGACCCTTTGTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGAAGAAAGAAAGGGAGACGGGGA---AGAAGGAA chr4 - 94230402 20475768 20475767 20475931 73754472 73754471 73754635 164 GAAAATAATC------TGATTTTCAGAAAGAAAATTGTCAAAATATTTATGTCTTGTATTTG----ATCATTAATATAATTTCTGATAAT----GTATTT---TCTAGCTTTTGGAGGCC-------------AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAA ..........------.:x..x.:.::..:x.....:.-.....-----...xx..:....x----....xxx...x......xx.x...----..:...---.:.x..::.x:::.:..-------------...................:.......x...:x..:...:x.x..:..:.---.:...... 10M6D22M1I5M5I13M4D24M4D6M3D17M13D50M3I8M 114/155 73.5% 164/94230402 0.0% 39/155 25.2% 148023290 42191265 +3252 chr4 + 190214555 168499178 168499177 168499263 86 AGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGAAGAAAGAAAGGGAGACGGGGAAGAAGGAAGGGAGAAGGGAGGGAGGAAGG chr4 - 94230402 24662126 24662125 24662211 69568192 69568191 69568277 86 AGCCAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAAG ...x..................:.xx:...x:.....:.:...x..:.:::x.:x:...:.....:x:.xx::.x..x:.....:. 86M 56/86 65.1% 86/94230402 0.0% 0/86 0.0% 143837052 46377503 +3115 chr4 + 190214555 168499182 168499181 168499230 49 AAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGAAGAAAGAAAGGGAGACG chr4 - 94230402 6438511 6438510 6438559 87791844 87791843 87791892 49 AAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATG .....:.....::...............:.:.:..::..:.x.....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 162060671 28153884 +3024 chr4 + 190214555 168499183 168499182 168499230 48 AAAAAAAAAAAAAAAAAAAAAAAAGGAAGGAAGAAAGAAAGGGAGACG chr4 - 94230402 6440208 6440207 6440255 87790148 87790147 87790195 48 AAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATG .....:.....::..............:.:.:..::..:.x.....:. 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 162058975 28155580 +3549 chr4 + 190214555 168520325 168520324 168520376 52 ACCAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAATGGCACCTTTATTTT chr4 - 94230402 87676344 87676343 87676395 6554008 6554007 6554059 52 ACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTGTTTT ..................:.:.:...............::..xx.:.:.... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 80843981 NA +3369 chr4 + 190214555 168542093 168542092 168542192 100 ACACACCTTTAAGGTTAT--ACTGCTGTTATCCACGTTTTGCAAGTGAGAAAACTGAGGCACAGCAAGGATAAGTAATGTGTCAGTCACCCAGGTAGTGAAT chr4 - 94230402 10729173 10729172 10729274 83501129 83501128 83501230 102 ATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAAT .:..x...x.:....x:x--.:.:..:.:.x.:x.:....:..:...:...............xxx...x........x..:.x:xx::.::....xx.... 18M2I82M 66/100 66.0% 102/94230402 0.0% 2/100 2.0% 157812920 32401635 +3197 chr4 + 190214555 168567554 168567553 168567601 48 TGTGTGTGTGTGTGTATGTAGATATATATATTATACATTATATATAAT chr4 - 94230402 63396167 63396166 63396214 30834189 30834188 30834236 48 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATACCAT .................:..x.........x..:.:...:....:x.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 105171387 85043168 +3337 chr4 + 190214555 168588490 168588489 168588548 59 CTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTACCTGGGATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:...........:.x...x..x.x........::::....x....:.:....x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 150391351 39823204 +3697 chr4 + 190214555 168599975 168599974 168600112 138 ATATATACATACATGTGTATACACACACGTATATACATACATGTGTGTACACACACATACATACATGTGTATACACACATATATACATACATG-TGTATACACACACATATA-------------TACATGCATGTGTAT-GCACACATATAT chr4 - 94230402 4417343 4417342 4417495 89812908 89812907 89813060 153 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACAACACACAGAAAT ..x..x.....:..::::.:.......x.x.:....::.::x.x..x.:....:::..xx.x:...x.:x...:........x..:x..:...-:::.x....xx.......-------------.x.....x......:-:......x.x.. 93M1I18M13I15M1I12M 92/138 66.7% 153/94230402 0.0% 15/138 10.9% 164182632 26031923 +3691 chr4 + 190214555 168599990 168599989 168600104 115 TGTATACACACACGTATATACATACATGTGTGTACACACACATACATACATGTGTATACACACATATATACATACATGTGTATACACACACATATATACATGCATGTGTATGCAC chr4 - 94230402 89016083 89016082 89016193 5214210 5214209 5214320 111 TGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAA----TGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC ...::.....:x:.:..::...:...:..x..::.........:..x.----..:......::.x..:.:::.:..x::::x.:.:......::x..:.:...x::..x:::... 48M4D63M 67/111 60.4% 111/94230402 0.0% 4/111 3.6% 79583907 NA +3774 chr4 + 190214555 168600032 168600031 168600179 148 TACATACATGTGTATACACACAT-ATATACATACATGTGTATACACACACATATATACATGCATGTGTATGCACACATATATATACATACATGTGTATACACACATATATACATATACAC------------TATATAAACTGTG------TTTGTGTGTGTATACA chr4 - 94230402 4417317 4417316 4417483 89812920 89812919 89813086 167 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAACTGAGCAATGCTTCATGCCTGTGTACA .....:.x...x:...x.x..x.-.x..x:.x....:.:..:.........:.x:x....:.:::..x:x.:x::..:..:...xx.x:...x.:x...:........x..:x....::.------------:..........x.------..::..:x...:.... 23M1I96M12I13M6I16M 97/148 65.5% 167/94230402 0.0% 19/148 12.8% 164182715 26031840 +3443 chr4 + 190214555 168600058 168600057 168600128 71 TACATACATGTGTATACACACACATATATACATGCATGTGTATGCACACATATATATACATACATGTGTAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...:.:....::............x........::x.x........::::.x.::..:::x.:......:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 96969923 93244632 +3347 chr4 + 190214555 168654036 168654035 168654101 66 GCTTCAAACTCCTGGGCTCAAGCAATCCTTCAACCTCAGCCTTCTAAGTAGCTGGGACTACACATG chr4 - 94230402 18197131 18197130 18197196 76033207 76033206 76033272 66 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..::x..:..:.....:.....::x.:.x:x::x.........::..........:.......:.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 150456905 39757650 +3213 chr4 + 190214555 168686185 168686184 168686229 45 GCTTCCTGGGTTTTTTTGTTTTGGTTTGGTTTGTTTTTTTTACTT chr4 - 94230402 26779996 26779995 26780040 67450363 67450362 67450407 45 GTTGCTTGGGTTTTTTTGTTTTGTTTTGGTTTGGTTTTTTTACCT .:.x.:.................x.........x.........:. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 141906189 48308366 +3693 chr4 + 190214555 168699136 168699135 168699236 101 TGGCATGATCTTGGTTCACTGCAACCTCTGCCTTCCAGGTTCAAGTGATTCTCCTGCCTTAGCCTCCCAAGTAGCTGGAATTACAGGCATCCACCACCACG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ......x..x..------..:..:..:xx:x....::..........x...x.xx.x..:.....::.............:....--.:.x......:::. 12M6D67M2D14M 68/93 73.1% 93/94230402 0.0% 8/93 8.6% 150502022 39712533 +3351 chr4 + 190214555 168705712 168705711 168705794 83 CTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCACCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.:.........::x...x.xx.x........:............:.:....x.::.--:....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 150508586 39705969 +3105 chr4 + 190214555 168719211 168719210 168719284 74 TCTAAGTTTCAATGACCTAAGTAATTATCAAAAGTAATCTT-CTTTTTTTTTTTTTTTTTTTTTTTGAGAAAAAT chr4 - 94230402 8754033 8754032 8754106 85476297 85476296 85476370 74 TCAGAGTTCTGATAACTCATCTGATTA-CAAAAGTAAAATTGCCTTTTTTCTTTTTTTTTTTTTTAGGAAAAAAT ..x:....:::..:..::.xx.:....-.........xx..-.:......:..............x.::...... 27M1D13M1I33M 55/73 75.3% 74/94230402 0.0% 2/73 2.7% 159965178 30249377 +3706 chr4 + 190214555 168719333 168719332 168719404 72 CTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.............x...x.xx.x........::.............:....x.::. 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 150522207 39692348 +3616 chr4 + 190214555 168722136 168722135 168722196 61 CTGGGCTCAGGTGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAAGTGCACAAC chr4 - 94230402 18197142 18197141 18197202 76033201 76033200 76033261 61 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC .....:...:...x.:.x.xx.x........::...........:......x......x.. 61M 48/61 78.7% 61/94230402 0.0% 0/61 0.0% 150524994 39689561 +3071 chr4 + 190214555 168723886 168723885 168723947 62 TTGGGCTTTTTTTTTTTTTTTTTTTTCTGGTGGAGTCTCACTCTGTTGCCAGGCTGGAGTGC chr4 - 94230402 60903209 60903208 60903270 33327133 33327132 33327194 62 TTCAGCCTTTTTTTTTTTTTTTTTTTCCAGCACAGTTTTAGTCTGTTGAAGATCAGGAGTGC ..x:..:....................::.::x...:.:.x.......xx::x.x....... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 107820677 82393878 +3099 chr4 + 190214555 168759141 168759140 168759224 84 TGCACTCCAGCCTGGGTGACAAGAGTGAGAC---TCCATCTCAAAAA--------------AAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437681 69437680 69437777 24792626 24792625 24792722 97 TGCATTCCAG----GGGATTGAGATTGAGATGGATCAACTCCAAAAATCCAATGCAATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT ....:.....----..x:x::...x.....:---..x.:::......--------------:.........x........:x................... 10M4D17M3I13M14I40M 64/80 80.0% 97/94230402 0.0% 21/80 26.2% 99321460 90893095 +3013 chr4 + 190214555 168761628 168761627 168761702 75 TTTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGTTTTTTGTTTTGGTAGAGACGG chr4 - 94230402 16279600 16279599 16279674 77950729 77950728 77950803 75 TTTTGTTGTTGTTGTTTGTTTGTTTTTTGTGGGTTTTTTTGCTTCTCTATCATTTTTTAATCTAGAGATAAAGGG .....................x......x.xxx.......x:..:.:.xx:.x.....x:.:.x.:x.x.:.x.. 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 152482028 37732527 +3015 chr4 + 190214555 168761630 168761629 168761667 38 TTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 3484479 3484478 3484516 90745887 90745886 90745924 38 TTGTTGCTGTTGTTTGTCTTTTTTTTTTTTTTCTTTCT ......:..........:..............:...:. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 165277151 24937404 +3103 chr4 + 190214555 168779894 168779893 168779948 55 CTACTATACATTCTTTTTTTTTTTTTCTTTTTGAGAGAAGGTCTCACTCTGTTGC chr4 - 94230402 5847641 5847640 5847695 88382708 88382707 88382762 55 CTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ..x....:.x..:..........:.:...........:xx....::...:x.... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 162932253 27282302 +3011 chr4 + 190214555 168784332 168784331 168784380 49 AAAAAAAGAGAGAGAGAGAGAAAGAAAAGAAAAGAAAAGAGAAAGGTAA chr4 - 94230402 65171429 65171428 65171477 29058926 29058925 29058974 49 AAAGAAGGAGAGGGAGGGAGAAGGAAGAGGACAGAAGAGAAAAAAATAA ...:..:.....:...:.....:...:..:.x....:...:...::... 49M 37/49 75.5% 49/94230402 0.0% 0/49 0.0% 103612903 86601652 +3199 chr4 + 190214555 168793129 168793128 168793259 131 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATG---------TGTGCATATATATACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACA ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:.::x:..:x::.:.:x..---------.....x:....x:... 115M9I16M 72/131 55.0% 140/94230402 0.0% 9/131 6.9% 79777047 NA +3199 chr4 + 190214555 168793153 168793152 168793283 131 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATG---------TGTGCATATATATACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACA ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:.::x:..:x::.:.:x..---------.....x:....x:... 115M9I16M 72/131 55.0% 140/94230402 0.0% 9/131 6.9% 79777071 NA +3199 chr4 + 190214555 168793177 168793176 168793307 131 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATG---------TGTGCATATATATACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACA ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:.::x:..:x::.:.:x..---------.....x:....x:... 115M9I16M 72/131 55.0% 140/94230402 0.0% 9/131 6.9% 79777095 NA +3199 chr4 + 190214555 168793201 168793200 168793331 131 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATG---------TGTGCATATATATACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACA ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:.::x:..:x::.:.:x..---------.....x:....x:... 115M9I16M 72/131 55.0% 140/94230402 0.0% 9/131 6.9% 79777119 NA +3199 chr4 + 190214555 168793225 168793224 168793355 131 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATG---------TGTGCATATATATACA chr4 - 94230402 89016082 89016081 89016221 5214182 5214181 5214321 140 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACA ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:.::x:..:x::.:.:x..---------.....x:....x:... 115M9I16M 72/131 55.0% 140/94230402 0.0% 9/131 6.9% 79777143 NA +3077 chr4 + 190214555 168793249 168793248 168793346 98 ATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCATATATATACATATATATGTGTGCAT chr4 - 94230402 89016082 89016081 89016179 5214224 5214223 5214321 98 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGT ..:.::.:....x.::...::::..:.::.x.:.::.:.:.::..::x..::...:..:..x..:........x.:.:x.:.::.:.:.:.x:...:. 98M 54/98 55.1% 98/94230402 0.0% 0/98 0.0% 79777167 NA +3202 chr4 + 190214555 168794465 168794464 168794539 75 CGTACGTGCACACGCACACACACATGCACGCACACACACACGCACACACACACACACACACACACACACACACAC chr4 - 94230402 8395787 8395786 8395861 85834542 85834541 85834616 75 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACAC .:.::...:.:::.::..:.x.....:.:x:...:.:::.:..x:...:xx.:.................x.... 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 160398678 29815877 +3077 chr4 + 190214555 168821449 168821448 168821505 57 ATATGTATGTGTGTGTATGCAGATATGGGTATATATATGTATGTACAAATATATACA chr4 - 94230402 35554961 35554960 35555017 58675386 58675385 58675442 57 ATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA ....:.x..x......:....x.....:..:.......:.:::......x..:.::. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 133266488 56948067 +3505 chr4 + 190214555 168867109 168867108 168867197 89 ACTATATATCTTTGTGCCTCAATTTCTTCATCTGTAAAATGGAGATAATAAAAGTGGCCTCTCTCCTCGGGTTTTTGTAAAAATTAAAT chr4 - 94230402 66214154 66214153 66214242 28016161 28016160 28016249 89 ACTAAGCCTCTCTGTATCACGATTTCTCCATCTGTAAAATGGGAATAATATTGCTTACCTATCTCCTAGAGGTGCAGGAAGGTTTAAAT ....x::x...:...::.x.:......:..............::......xx:x.x:...x......x.:.x.x:x.x..::x...... 89M 60/89 67.4% 89/94230402 0.0% 0/89 0.0% 102652955 87561600 +3037 chr4 + 190214555 168905113 168905112 168905165 53 TGAGACTTTGTTTTTTGTTTTGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 62233701 62233700 62233753 31996650 31996649 31996702 53 TGAAACCTGGTGCTTCTCTTTGGTGGTTTTTTGTTTTTTTTTTGTTTTTTTTT ...:..:.x..x:..:x:....x.........x..........x......... 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 106671412 83543143 +3321 chr4 + 190214555 168905765 168905764 168905821 57 ACAAAAGCGGAACTTGCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTCTTTTTTGAGA chr4 - 94230402 13534078 13534077 13534134 80696269 80696268 80696325 57 ACAAAAGCCACACTGGCTTTTTTTTTTTTTTTTCCTTCCCTTTTTTCTATTTCAAGA ........x:x...x..........:.......::..:::........x...::... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 155371687 34842868 +3036 chr4 + 190214555 168919505 168919504 168919563 59 AAGGAGCAAGACTGTCTTAAAAAAAAAAAAAAAGTGAAAAACCTTGCCACATGTACAGA chr4 - 94230402 79055179 79055178 79055237 15175166 15175165 15175224 59 AAACAGCAAGGCTTTCTAAAAAAAAAAAAAAAAGTAAAAAAGCATGATACACTTGGAGA ..:x......:..x...x.................:.....x.x..x:...:x.:x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 89864326 NA +3006 chr4 + 190214555 168922080 168922079 168922131 52 TATATTTATATATATATATATATACACACACACACACACACACACACACACA chr4 - 94230402 8395811 8395810 8395862 85834541 85834540 85834592 52 TGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:......:....:...::x..:.:xx.:.................x..... 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 160526269 29688286 +3164 chr4 + 190214555 168934230 168934229 168934335 106 AAGACCCAGTCTCCAAAACAAGTTTTAAAAGAAACTAGAAAAGCAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAGCAAGCCAAACCCAAAAT----TAGCAGAAGGAAA chr4 - 94230402 86999904 86999903 87000013 7230390 7230389 7230499 110 AAGACACAGTTTTGTCAATAAGGTTAAAAAGAAAAAATATAGAGATGTAAAACAACAACAACAAAAAAAAAAAACACAGAAGAAATATAATATACGCTTGCAGAGGGAAA .....x....:.:xxx..:...x..x........xx.x.x.::x.x:x.......x..x..x............x:..::xx...:x:..x..----.x.....:..... 93M4I13M 72/106 67.9% 110/94230402 0.0% 4/106 3.8% 81934326 NA +3279 chr4 + 190214555 168934266 168934265 168934335 70 AGAAAAGCAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAGCAAGCCAAACCCAAAATTAGCAGAAGGAAA chr4 - 94230402 91230445 91230444 91230502 2999901 2999900 2999958 58 AGAGGAGCAAGACAACCAAAAGAAAAAAAAAAAAAAAGAGCAAGCA------------AGCAAAAGGAAA ...::.....:.x..x.....:...............:.......x------------....:....... 46M12D12M 49/58 84.5% 58/94230402 0.0% 12/58 20.7% 77703821 NA +3186 chr4 + 190214555 168956579 168956578 168956642 64 CACAGCCAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAATGGAAATAAT chr4 - 94230402 6332153 6332152 6332216 87898187 87898186 87898250 64 CACAGTCAGCCTCAGTGGCCTTAAAAAGAAAAGAAAAAGAAAAGAAAAACAGAATAGTAAGAAT .....:...x.:.x..xx.xxx.....:....:.....:....:...........:.x..x... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 162624426 27590129 +8676 chr4 + 190214555 168990139 168990138 168990340 202 TAATCTGCAAATTACAAAATGAGTTGTAATCCCCCATCCACTACCAGAACATGCCCTGTAATATACGGTGATTCTAAAAGAAACACAACCGCATGTGCCACCTCAATAGTTTCTCCAAACCTCCCAAGAGGAATATTTTTCTTTAAATGTTCTTCTTTCAAGTCTTTCGTCATATCTGTGTGTACAAATCCTAAAAGAGAAA chr4 - 94230402 67593860 67593859 67594056 26636347 26636346 26636543 197 TAATATCTAAATCAAAA-----GCTGCAAGCCTCCATCCACAATTAGAGTACTCCCCGTAACATATGGGGACTCCAGAAGAAATAAAACAGCTTGTGCAACTTCATGAGGGTCTCCAAACCTTCCAAGGGGAATTGCTTTCTTCAACTCGTCTTCTTCCAAATGAGCAGTCATCTCTGTGTGAATAAAGCCTAAGAAAGGAA ....x.x:....:.x..-----.:..:..x..:........x.::...::.:x...:....:...:..x..:..:.:......:.x...x..x.....x..:...xx..xx...........:.....:.....xx:......:..x.xx.......:...:.xxx:x.....x........x.:...x.....:.:..:.. 17M5D180M 141/197 71.6% 197/94230402 0.0% 5/197 2.5% 101396279 88818276 +3264 chr4 + 190214555 168993186 168993185 168993239 54 TTCTGTCTTTAGACACATGTATTTTCCTTTTTTTTTTTTTTTTGAGACAAGAGT chr4 - 94230402 85992214 85992213 85992267 8238136 8238135 8238189 54 TTCTGCTTTTAGGAGCATGGATTTTTCTTTTTCTTTTTTTTTTTAAACAAAAAT .....::.....:x:....x.....:......:..........x.:....:.:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 83000972 NA +9601 chr4 + 190214555 169002037 169002036 169002219 183 ATAATCAAGTTATTTTAATAAAGTTTTCA----CTAACCTGGTGCAACTACATTCACTCTAATTTTCTTTCTTGCTACCTCTTTAGCAAGAGCACGTGAAAATCCAACTAATCCTCCTTTACTGGCACTGTAAACGGACTGGCCAGAGTTGCCTTTTAAGCCAACAATGCTTCCTAGGACAAAAAAA chr4 - 94230402 67595263 67595262 67595446 26634957 26634956 26635140 184 ATAGTCAAGG-ATTT--ACAGAGTTCCCAAAAACTAACCTGGAGCAACCACGTTGACTCGAATTTGCTTTCTTGCAACTTCTTTAGCAAGAGAACGCGAAAATCCAACTATTCCTGCTTTGCTAGCACTGTATATGCTTTGACCAGAGTTGCCTTTAAGTCCTACAACACTCCCTAAAATAAAGAAA ...:.....x-....--.:.:....::..----.........x.....:..:..x....x.....x.........x..:.............x...:.............x....x....:..:........x.:.xx:..:..............x.:x..x....::..:....::.:...:... 10M1D4M2D12M4I154M 143/180 79.4% 184/94230402 0.0% 7/180 3.9% 101406774 88807781 +8838 chr4 + 190214555 169006749 169006748 169006918 170 ACTCACCTACATTAACAATAGACCCTCCCTGTTGTTGAATCATAGTCCTCATGGCAGCTTTACAGGTCAGCATGGAACCCAAGAGGTTAGTATGAAGCTGAGATACCATATCTTCAGTTTTTGTTCTTACTAAAAGACCATCCCT-ACAAAAAG---AAACAGCATATAATAGC chr4 - 94230402 67595923 67595922 67596096 26634307 26634306 26634480 174 ATTTACCTATATTAACAATAGCACCTCCTTGATGATGAATCATACTTTTTACAGCAGCTTTGCATGTCAACATTGTTCCCAGAAGGTTCGTGTGAATCTGGGATACCATATCTTCAGTCTTGGTTCTCAGTAACAAGCCATCCCTGACAAAGAGACCAAAAAACACACAAGAGC .:.:.....:...........xx.....:..x..x.........x.::.:.::........:..x....:...x.xx....::.....x..:....x...:.................:..x.....:.x...x.::........-.....:..---...x.:..:.:..x... 145M1I8M3I17M 131/170 77.1% 174/94230402 0.0% 4/170 2.4% 101410826 88803729 +6374 chr4 + 190214555 169007628 169007627 169007802 175 TGACCAACCTGTTAATACCAGCTGCATTTACCAAGAAATTTACTCGACCTAAATGTTTCTCCAGCTCTTCAAATGTATTTTGAACATCATGTTCTTTAGCAACATCACAGCTAAATGCCAAATGATCTCCTACAC---AACAAAGTTAAATAAGAATTAC-------------TTATAACTC--AAATTTTAA chr4 - 94230402 67597122 67597121 67597314 26633089 26633088 26633281 193 TAACTTACCTGTTGATCCCAGCTGCATTAACCAAATAGTTAATAGGACCTAAATTCCTCTGTATCTCCTCAAAAGCACGTTGGACTTCTTGTTCTCTGGATACATCACAGCTAAGTGCCAGATGGCCAGCTGCATTGAAATAAAGGCACGTGATGATAACGGTAGAAAGAAGTTTGTAATTCATAAATCTTAA .:..:x.......:..x...........x.....:x.:..x.:xx.........x::...x:.x...:.....x.:.:x...:..x..x......:.:.xx.............:.....:...::.xx..:..:---..:....x:.x:.:.x:..x..-------------..:...:..--....:.... 135M3I22M13I9M2I9M 124/175 70.9% 193/94230402 0.0% 18/175 10.3% 101410506 88804049 +7847 chr4 + 190214555 169009941 169009940 169010105 165 TACCTACCGCCGAGGTCACCGGCGGCGGCTTTGGCCCCTTCCAGGTTTCTGGCAATGACCGCCAGTCGGTAGCCTTTCCGGGCCATTAACTGGGCCACAGCTCTGCCAATGCCTCGGGAGCCTCCAAAAACAGCACACACTTTGTCCATCTCGGAG------TCACAAACT chr4 - 94230402 67597763 67597762 67597933 26632470 26632469 26632640 171 TACATACCACCAAGACCACGTGCAGTATTTTGGGCTACTTCAAGATTTCTAGCAATAATTGCCAGGTGGCAGCCTTTCCGTGCCAATAATTCTGCAACAGCTTTTCCTATTCCTCGGGATCCTCCAAAAACGGCACAAATCTTGCCCATCCTAAAAAATAATTCACAAATT ...x....:..:..::...xx..:.::x:..x...:x....x..:.....:.....:.::.....x:..:..........x....x...:.xx..x......:.x..x..x........x...........:.....x.::...:.....::::.:------.......:. 156M6I9M 119/165 72.1% 171/94230402 0.0% 6/165 3.6% 101412178 88802377 +3438 chr4 + 190214555 169022233 169022232 169022315 83 TATCTTAAAGAAAATAGAAAGCCATAGAAGGCTGTTTTTGTTGTTGTTGTTGTTGTTTGTTGTTTTGGTTTTTTTTTTTTTTT chr4 - 94230402 51655308 51655307 51655381 42575022 42575021 42575095 74 TATTTATGAGAAAATAGAGGG---------GCTTTTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTTTGTT ...:.xx:..........::.---------...x.....................x.x..x..xx....xx.........x.. 21M9D53M 59/74 79.7% 74/94230402 0.0% 9/74 12.2% 117366925 72847630 +3571 chr4 + 190214555 169026284 169026283 169026445 162 TAAAAAGAAACGAAGGAAGGAGAGAGAGAG------AGAGAGAAAGAAAGAAAGAAAGAGAGAAAGAAGGAAGGAAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAGAGAAGGAAGGAAGGAGAGAGAAAGAAAGAAAGAAAGGAGAAAGAAAGAAAAAAAA chr4 - 94230402 83391954 83391953 83392116 10838287 10838286 10838449 163 TGAGAGGGAGCAGAGTGAAGAGGAAGAGGTCTGCTTAGTGAAAAAGAAACCGAG-----GTGAAAGAATGAATTAAGCAGAAAAAGGCAAAGGGGAAGCTGACAGTGAAGTGGGACAGGTGGCAGCTTCAGACAAAGAAGAAAGGAGAGGAGAAAACAGGAGGAGGAA .:.:.:.:.:.::..x:.:...::....:x------..x..:.......xx:..-----.x.......x...xx...x...:.:..:x.:.::.....xx..x..x:.::x:.::x...x:.x.:xxxx...x......::..:..:........:x.:..::.::.. 30M6I18M5D109M 94/157 59.9% 163/94230402 0.0% 11/157 7.0% 85634330 NA +3342 chr4 + 190214555 169026337 169026336 169026420 84 GAGAAAGAAGGAAGGAAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAGAGAAGGAAGGAAGGAGAGAGAAAGAAAGAA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x.:xx..x...:.x:..:...........:..:.x::x..xx.:..:........:.:x...::x:.....::..:.. 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 132168044 58046511 +3079 chr4 + 190214555 169026346 169026345 169026425 80 GGAAGGAAGGAGAGAGAGAGAGAAAGGAAGAAGAAAGAAAGAGAGAGAAGGAAGGAAGGAGAGAGAAAGAAAGAAAGAAA chr4 - 94230402 32695584 32695583 32695663 61534740 61534739 61534819 80 GGAAGAAAGGTGCAAAAGAGATAATGGAAGGAAAAAGAAAAATATAGCACGAGTGTTGTAGGTAGGAGGAAAGCAGAAAA .....:....x.x:.:.....x..x.....:.:.......:.x.x..x.x..:x.xx.x..:x..:.:.....x.::... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 136330762 53883793 +10854 chr4 + 190214555 169030513 169030512 169031011 499 GATTGTAATTGTGACCATAATTCGTATTGTACACATTGGTCAATTTCTTTAACAGCGGC-----TGCAGAAAATGTCAAAGCTCAATTTTTTTTCTCCTCCAACTCTTTGATATTTTGCTGTGTGACTCACGTCCTGTAGTAACTCCTGGCTGACTTGAAAGCCTTTCTAGGACATCAATTCTCAGGACTCAATTTTCTCTATCAGATTGTTGCAAATAAATCTCATTTTATATCTCAGCTCATAAGAGCAGTGAAAATGCTTTACTGTGTCTCTGCTTTCTATTGCTGTGTTTAACGCTACAGCTGAGGACTTGATTGTCCCTCCAAGAGACACGTAAGATGGGAATG-TGAATTCCCTTCCCCCATCCCTTGGCTCCCAGTGACAATGGAGCATGAAGATAGTAAATCATCGTCATAATTGCCTAGACCTATCTAGTCAACTGGCTTAATAAGACGGGAAGTAGGTTGCTGAGAAAGAGGAATGACGTTTTAACAAGACGACT chr4 - 94230402 67602813 67602812 67603258 26627145 26627144 26627590 446 GATAGTGATAGCAACAATCGCTCATATCTCACAGACTGCTCACCTCCTTTATCTTCAACAGTATTACAGGAAATGTCAAAGA-CAATATTCTTTA-----CAGCTGTTACCCATTTTACAGCCTGAAACACATACAGTAATA------------CTTGGAAAGCTTTCAAGGAACTCAATTCCTGACATTCGATTTTCTGTATCAGATTGTCCCAAATAAATCTAGTTTCATATCTCATCTCATCTCA----CAGAAATACGTTGT--TGTCATTTCATCCTGTTCATGCATTTCACTAAGCAGCTGAAGACTTCATC-TCCTTGTGAGAGATACAGAAGCAAGTGCTGTTGTAATTCCTTCC--------------------AATGATTGAGCATTAGAGTAGTAAAGCATAATAA--------------TACCCAATCGGCTGGCTTAATGAGGTAGAAAGTAGGTTATTAAAGATGAGAAGAGCTATTTTTAGATGACTGCT ...x..:..x.::..x..x::..:...:x:...x.:..x...x:.:.....x.xx.::.-----.:...:...........x-....x..:...x-----..:..x..xxx:.....:.x.:x...xx...:.x.x...:..------------....:..:x.....x....xx.......::::x.:..:.......x...........:x...........x:...:........x.....xxx.----:::....:.x..::--....x:.x.x.:..:..xx..::...x..xxx:.......:.....x..:-...:.x::.....:..:x...xx:.x:x..-..x.x.:......--------------------:.::..x......x.:::.......x...x:.x.--------------..:.:.:..::..........:..:::.:.........::.:.::.x...:.:x.x::....x.x.x...x:.. 59M5I18M1D12M5D42M12D94M4D14M2D50M1D30M1I13M20D34M14D74M 291/440 66.1% 446/94230402 0.0% 65/440 14.8% 101427700 88786855 +4289 chr4 + 190214555 169032236 169032235 169032425 190 TCTTCCTTTCCTTCATCCTAACTTATTTTTTAACCCTTTTTTCTTTTCCTCTTCCTTCCTTATTCCCTCTCTCTCCTCTTTCCTTTCTTCCTTTTTCTTACCCTCTTCCTTTGTTCCTCCCTTTCTTCTCCCTTTC---CTCCTTCC-----CTTCTTTCC-TTCTTCCTTCCTCCCTTCCTTTCTCCTTCCTTCCTCC chr4 - 94230402 61964741 61964740 61964934 32265469 32265468 32265662 194 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATT-----TTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ...:.:...:..:::.:::..x.:.x:.x:.:...:x...:...x..x:.-----......x.......:.........:::..:.:...:.::...:xx:x.x.x.x.x..x.:.:....:xxx:..:...::..---.....:x.-----..:..:...-.x..:...x.x....::.:.x..:xx:x..x:..... 50M5D81M3I8M5I9M1I37M 114/185 61.6% 194/94230402 0.0% 14/185 7.6% 107067495 83147060 +3553 chr4 + 190214555 169032356 169032355 169032531 176 CTTTCTTCTCCCTTTCCTCCTTCCCTTCTTTCCTTCTTCCTTCCTCCCTTCCTTTCTCCTTCCTTCCTCCTTCTCTCCCTTCTTCCTTTTCTTCTTTTCTCCATTCCTTCCCCTCTTCCTTCTTCCTTTTCCTTCCTTCTTCCCTCTGTTCCTTCTT-CTTTGGGTATCTCACCTTC chr4 - 94230402 34857648 34857647 34857823 59372580 59372579 59372755 176 CTTTTTCCTCTTATTAAATTTACCCTTTGTTATTTCTTCCTGTTATTATTTTCCTTTTATTACTTACCCTTTTATTACTATTTTCCCTTTTATTATTTTTTTCTTCCCCCCTCGCCCCCCTCATTATTATTATT-ATTTTTCCTTTTATTATTCGTTGCTTTCGGTGTTTTTCCTTC ....:.:...::x..xxx::.x.....:x..x:........x::x::x..::::.:.:x..x...x.:.:..:x:.x.:x.:....:...:x.:x...:.::x....::..:.x.::..:..x.:x..x.:x..-x..:....:.:.:..x:.:x..-....x...:.:.:x..... 134M1D22M1I19M 99/175 56.6% 176/94230402 0.0% 2/175 1.1% 134174708 56039847 +3078 chr4 + 190214555 169053757 169053756 169053828 72 CTGCAACCTCCGCCTCCCAGGTTCAAACAATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGAACTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::.......:::x...x.xx.x...:....::::................x.... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 150856631 39357924 +3107 chr4 + 190214555 169078864 169078863 169078914 51 AAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAAAACAAAAAACTAAATAC chr4 - 94230402 72849569 72849568 72849619 21380784 21380783 21380834 51 AGAGGAAAAAAACAAAAGCAAACAAATAAAAAAAAACAGAAAACATAATGC .:.::.......x....:........x...........:.....xx...:. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 96229295 93985260 +50393 chr4 + 190214555 169094226 169094225 169096704 2479 CAAAATTTT------AAGGACTGACACAAGGGACATACAAAGG---------TTTGAACATCAAATTTTAATCTTGAAACCTTTTATCCAGTCCTCAAATTAT------TAA-----CATGAAAAGGAGTGATAAATCGCAATTTTATCATTACCATATCACTGTGTAACAAGCCCTTGTTACAAAATCTCCCTCTACTGTCTGCAAAAAACCAATAGAAAACCCATACATTATATTACCTAATGATCT-ATTAACAGATGAAATTTTAACCAACTTTATACCAGGAAA--CTATGAACAGAGGTACTTCAATCACATAGCTTAAAATATGGAGAAAAGACAGGTAAAAAAATTATCTTAACCTGTAGTAGTCTTTTTTCTTTTTAAAATTTTTATAAAATACACTA-ATTTCCCAAAATAAAGAATATTATGACACATTGGTGTCAACTTACACAGATGAAAGCTGATGCCAGCTTTTTCCTAACTAAAG-TTCATTTCACCAAACCTTTATATATTACATGAATATCCAAGTAAAGTATTTTTT--TTTTAAATTCAACACACAGGAACATAAT-ATACATTGTTTTTTTTTAAAAAAAAGGTTAATTTAGGAATGATTTCATCTTCAACCACATAAA-----------GTATCTTTT--------TAAGACCAT---GAAACCTCTTGTCATTGCAAGA-----CTTTTCAGTTCATGTTT-CTATTTCCCAGTTTTAATTCTTAAAGGAAAAAAAAAAAGATGAAAGGGTTTATTATGTATTTCCCATGAGAAAACTGTGGTAAGGATCTTATTCATTACCAGGCTGTCTTCCCTCCTTTTGTTTTCCGGACTACCCAGATCCATGACTGCGTGGCACCGTAATGAAAT-CGGTGGGAGAGGCCAATGACATCAAG---GAATGGATATAAAAAGACAGGCTCTTCTGGATCCTGCCACAATTGTA--------------------AGGTGTGGGCAAATTCACTCCCACCAAGCCTTCCAGAGCTCCACAGTCACAGGAGTAGTCTCCTGGTTAACT-CATCCTTGATGTCTGTCTGCTGGGAGGACATAAAAGACCACTTTCACTAATGACTTGTGTAGTGGCTAATGCATGCCTTAGCCAGAGAGGGAGCGAGTGCACTGAAGAGACCTTGGTCAGTAGTGGCTTTGGGGTAGAGAAGAGAACACTGTTTATTTTTACACCTCCTGAATTGGTCAATTCTGAGTACAAACTCATCT--TAACAGGAAATCGCAATGAAATATACACACCATGCACAGTCTATATTACTGTGGGAATCCAGTAATACATGCAAGACGTGGGGAAAG--------------AATCACAATGGATGAAT-----ATGAACTTTTCACAGTGTTTCTTATAGCCTTTGACTTAACACGAGTGCATCACTTACCACCACTATCTCACAAATGTTTTACT-TGTGTCCTGGGCATGCAGGTCAGTTGGGG--TAAAATGTGAAATGACGCTTCATAGCCATTCTCAGACAGTGACTACAACTT-CAATTTCCCCTACTTTCCAACCAAACAATTGAGCTGCTTCTGCTATAAAACTAAATATATTTCTAAATACATTTTGTTCAAGGGTTGTGCTGTA---TTCTTTCTCATT-------GTTTCAGTCACTTCATTCTAGGAAAATTAAAAACCCACACAATTAAATTGAGGACTAGGTCTT-------CAGGGTGATTCCTACCAAACTAGAAAG-AGAGGGAATCACTAACTTCTCTTCTCTCAAGTTTCTGTCTCTCTACCCC-----AGGCCCTAA-----------TTGATACTGATTCATTTGTA-------------------------------------TGTTTGGTTTCCCAAAGAAGAAAACCAAATTAGAGAAC----TGGGATTTCTATCTT---------AAAGAAGCAAAACATA-----------------------------ACCCCAAA--------ATATAATGGTAGCAGGGAGGAGGAGAG-------------------------GGGAAAATGCATTCA----------------CTCTATGTCAAAACGAATCTCTTGCTCTCAACAGGAGATAATCCAGCTTCTCCTTACCTATCATTTCATAAATTAATAATTTCTTAAAATCATAATCCAAAGAACGTAT--CTATTATACGAAAAGTTCAAGTTTAAAAAAG---CAAATAAATTAGTTA-AGCCTTGTAAACAATTGTCCATTTTAGTCATATATCTTAAAAAAAAAAAAAAGTTTCTCTGTGTAGTAAATCAGACAGTACAAGGCACACCTTATACATCCGAATCCAGACTAACAAAACCCACACAAAC----ATCTTCTTCATTCTGCTCGCTGGGGTAACTGTGCTG-GGGCATCAGAGTCACATACCAATCCTTTGCTCATCTCCTGACCATCTGGA---AGTCCACAAATGTGCTCTTTCTGTTAAACTGCTTTGTGCTACTTTGTTGTGTGAAGTGATTTTAAGCTTCTTCAGTGTCAGTCTCCTCATATGTTTTCCACAAAGCTTCCTGGGAAAAGGCCAGTTTTCCCATTACGTTGTAATGTGCCTTTGAACCAGCCATCCTCTCGTTTTTTATGAACAAACACAATATCTCCTTCTTTAAGTTCAAGTTCTGCCTCACTCTGAGGAGGATAGGAAACCACCACCCTGTGCCT-----AGAAAAGAAAGAGAT chr4 - 94230402 67614173 67614172 67616711 26613692 26613691 26616230 2539 CAAAATTTTTTTTGTATGGAATTACACAAAGCAAATGCACAGGGTTTGTCTGTTTCGACACTGAATT--AATCCCAAG---------CCAATACCAAAAAAATACCTCCTAAAAGATCACAAAAAAGGCAGGATAACTGCA-TTTTGTCATTGC---ACTGCTATGTAATAAGCCCTTTCTACAAA-----CATTTATTGTT---AAAAAA-----ATTAAAACCGTATTCCATCTAACAGAACTATTGGATTAACAGCTGATTTCTTA-CTGACTTTACACCATGAAAATCTATTAACAGAGGTAACTTAGTCACTTAGTTTAAAATATGGAGAGCAGAAATAGAAAAAA------TTAACCTTTAGTAGTCTTT-----------AAT----ATAAAATGCACTACGTTTTTCAAAATAA-GAATATTATGACACACTAGTGCCAATTTATGCTGACAAAAGCTGATATCAGCTCCTTTCTAACTAAAAATTTGTTTCACAAAACCTTTATATATTACATGAATATTCAAGTAAACTATTTAAAAATATTAAA----AAGCACAAAAACTGAATTATACAGTGTTTC-----AGAGAGACAGTTAATTTGGGAATGCTGTCGTGTTCAACTACATATATTTATAGATATATATTTTTTCTTATTCTTAAGACCATCACAATACTACATGACAATGGCAAAGAATCCTTGTCA-TTAACATTTGATATTTCTCAATGTATAACTTCAAAAAAATAAAATAAGGATTTAACACATTGCTGTGTATTT----------------------------GTTCAT--------------CGCTTTCTATATACTGCGTGATACTGAATCACACTACTGGCT--TCCCTTTGTAAAGTGCCGAGTAACAGCCAAATTACATCAAATTTAACTGGAGATGATGGTGCTCAGCGTCTTGCAAGATGTCACAACGGAACTTCAACAGTCAAAAAATAAAAGTGT---CAGAT---CTCTAACAGAACCCTGAAAGACT-------------AACATTTTCCTTGCAGGCTGCGTTCTTTATATCCATCAGCTGCAAGGAAATAAAAATG---TTTTATTAATGATGCAAACACTGG-----ACACCTCTCTGGTCGAAAGTGAGCTGAT-CACTAG-----TTTTGGTCA--AGTGGCTTTTGGG-------------------------------------------AAACTTTCAGAGCAAAATAACCCAGTAACAGGTAATTGAAAAGGAAAATGCGAATCATGCACAG-CTATTTTACTGCAGGAATTGAGTAACACATGCAAGACAAAGAAAAGGTCAGAACATACCAAAGTAGAAATGGTTAAGACGTTAGTAAAATTTTCACAGTGTTTCATACAGCCTTTACTTTAACACGAGTGTATCACTTACCACCACTATTGCTCAGACATTGTAAAACACCTCTTGGCCATGCAGATCAGTTTGAGAAGAAAACAGCAAATTACACTTCTTAGGCGGTTTTAGACAGTAAGTACAACTTATAATTT----TATTTTC-------ATATTCAGTCT--------TATGAAAC-AGGTGT-TTTCAAGACATTATTCTTCTAAGTACTGGGCTTTAACATTCCCTCCAATTTTGTTGGATCTTGAGCACAAAATGCCAAAAAAAAAAAAAAAAGGCCAAAT---ATACAAAGCTAAGCTTTGTTCCAACAGCCCAGTTACTACAAAATCAGAAGGTATAGGGAA--ATTGTCATCAACACTCTTAAATTTCTTCCTTCCTAACCTTGAGACGACTCTAACCTTGGGATGGTTGAATTTCAATCATTTGTCCACATACATCTTTGCCTCGTGGAAACATTACTCCACTTGTGTGATTTATGAAAGAGGAGAACTAGACTCAAGAACACCACTGACTTTCTTTTTTCCTCCATCTGAAGAA-CAAAACACATTTTTCCCCCACTTGGCAAATTCTATTTGACGCCACATCACCACCATTCAATATTAACTCATAGAACAAGAGACTTACTCCACTGTTAAACACCACAGGGGAAAAATGTCCAGAGGATAAATGGGAGGCTCTTTATCAGATATAATTGCTTGCTCATAA--GGAGAGAATCCAGCTTCCCCTTAGCTATTCTTTCATAAATTAATATTTTGTTAAAATCATAGTCACAAGATTTTTTAACTATTACACAAAA--TTCAAGTTTAAAAAAAAAACCAATAAATTAGTTACAGCCTTGTAAACAATTGTTCATTTATGTAACATATGT-----GGGGAAAAAAGTTCTTCTATATAATAAATCAGACAGTACAAGGCACACATCACACTCAAGAATCAAAAGTGATAAAACCAGCAGATGCCTTCATCTTCTT-----TGTTTGCTGGTGTAATTGTGCTATAGACACTGTAAAAATATGTATATT-TTTGTTTACACTACAGTCATTTGAACACATTTCATGACTGTGCTTTTTCCATAAGAT--ACTTGTGCTACTTTACAGTACGG---TATCTGAAGCTCTT--GGAATCGGTCCTCTCAGACGTTCTCTACAAAGCTGCCAGGGAAAAGGCCAGTTTTTCCATTTCGTTGCAGAGTGCCTTTGAACCAGCCATCCTCACGTTTTTTATGTACAAATACAATGTCACCTTCTTTAAGTTCGAGTTCTGCTTCACTCTGAGGAGGATAGGATACCACAACTCTGTACCTGTTTGATAGGGGAAAAAAAT .........------.x...x.x......:.x.x..:..x...---------...x:...:::....--....:::.:---------...:.x.:x...xx..------...-----..::....:.:xx.:xx..::...-....:.....:.---.:::..:.....:........x:......-----.x.:..:...:---......-----.xx...x..:..:x::..x.x..xx..:x..:x-........x...xx.:...-.::......:....x....--....x..........x:.:.:....x...:..............:x...x.x:x......------.......x...........-----------...----.......:.....-:...::........-...............:.:...:...:...::.x..::.........::.....::..:.........:-..::......x.........................:........x.....xxx--.x.....----.x:....::...xx...-.....x.....:-----.:.:.:.x:........:......x.x..:.x......:.....x.-----------:...:....--------.........---:.x..:x.x..x..x..xx.:.-----...x...-..x.::...-x......:..:.x.xx.x::.:...::..x....x..:...xx..x:xx..::.:.......----------------------------:.....--------------.x..:::.x.:.x:.x..x:x...:x.:x:x..:x....xx.--:x..x.x:.:..:.-.x.x.x:.x..x.x...x.......:---:.x....x..:.x::x:.xx:x:x.::..x.xxx..:.....:x.x.--------------------.:....---..:..---...:x..x:.:..:.xx.:::..-------------.::.x.:....x.:x::..-.:.:...x..:..::..x....x:....x......:xx---...:.:......:x::x::.x...-----:..:x:..:x.x:x..:..x....x::.-....::-----::.......--.........x...-------------------------------------------x..:.:.x..x:....x.x.:.:--.......x...:.x..x.:..x..:.:x.:.........-....x......::.....:x.....:...........:x:.::..:.--------------.:.x:x.....x.:.:x-----:.:..x...............x..:.......:x:............:..................:x.x..:.::..x..xx-:::x..:...x.......:......x.:.--x....::xx....x..:....x...x.:x.:.:.......:.x........-:.....----..:....-------.:.x.:::x..--------...:....-.::.:.-....x.:.:.:xx..:x.::...x::..x...x..---...::..:x...-------:.:.:::x...xxx..x.:.::....xx.....xxx:.xx...---..xx.:::...:.::..-------...xx:::..x....x...::....:.-.x......--.:.:x.x..xx:x....:..:.....x:..::...x..:-----x.:.:....-----------....xx:.x.x........x-------------------------------------...x..:...x:x.....:..:...:.:.:.x:.....----:x.:x.....x.:..---------:.....-.......:.-----------------------------..x...x.--------..x:...:x..:.xx:x..:.x:....-------------------------...:...x:::.:..----------------....x.:...:.xxx...:x.......x:..--.....x...........:.....x....:x...............x...x...........:..xx....x:x.x.--......:..:...--...............:---.x.............-..................:.....xx..x.:....x.-----::::.........::...:.:..:........................x.:.:..x:xx.....x.:.x.:.:......x:..x.x:.----........-----..:.:.....x....:......:-:.:..:::x.:xx.:..::xx..:-....:.:.:x::x::::...:..:.---.x.:..::.x......:....::.x.:.:--x:............::x..::.:---x..:.x.....::.--:.x:..:...::....x.:...:..:........x..x.................:.....x.....:.:x.......................x...........x.....:.....:..x..............:........:....................x.....x..:....:...-----.x.:::....:.:.. 9M6I28M9I15M2D9M9D16M6I3M5I24M1D12M3D29M5D11M3D6M5D33M1I19M1D19M2I60M6D19M11D3M4D13M1I14M1D68M1I54M2I7M4D17M1I12M5D46M11I9M8I9M3I22M5I7M1D9M1I62M28D6M14D42M2D14M1I26M3I47M20I6M3D5M3D23M13D19M1I38M3D24M5D28M1D6M5D9M2D13M43D23M2I39M1D47M14I17M5I83M1I29M2I51M1I6M4D7M7D11M8D8M1D6M1D35M3I12M7I43M3D17M7I27M1I8M2D39M5I9M11I20M37I38M4I15M9I6M1D9M29I8M8I27M25I15M16I31M2D76M2I13M2D16M3I15M1I37M5D88M4I8M5D23M1I24M1D25M3I29M2D23M3D14M2D184M5I15M 1576/2246 70.2% 2539/94230402 0.0% 526/2246 23.4% 101480053 88734502 +15047 chr4 + 190214555 169106840 169106839 169107224 385 AACTTACCTTTCACAAACGACAGGTCTAGACTCATTCAAGACAGGACCCAGGGAGGAACAGGCCTGGCGAGGAGGTGGAGCGATGGGAACTGCGGAGTCCAGGGAACTTGCCTTCCTATGAAAAGCATCCTGGGCCAGGGCTGCTCCTGCCACTGCAGTCGTGACCGGTCCGTCCCCGTCCACAGGGCAGGAGCCTGCCCTGCCATGGCCACCTCCTGGTGGCAGTTCGGGCCCCACCGCTCCCTGGAGAGGAAGCTCTGCACTGCCCAGCTCCACTTCTAGGGTGGGCGATGCTGGAGGAGACACGCGGGGCTTCCGTTTAGTGGAGGCGCCAGAAAGCAACTTCAACAAACCCTTTTTTTCTTTCTGGAAAAAAAAAATAATG chr4 - 94230402 67620369 67620368 67620729 26609674 26609673 26610034 361 AACTTACCTTTCACAGACAAGGGGCCTGGACTCGTTCAAGACTGGAGCCAGGGACGAGCAAGGCAGCCGTGGTGGTGGTGCTATTGGGATAGCAGAATCCAGGGAACTCGTTTTCCGCTGCAACATCTCCTGTGCCGGC----------CCA--------GAGACC------TCGCAGTCAGTGGGACAGATTCCAGCTCTGCTATGACCTCCAGCTGATGGAAGCTCTGGCCCAACTGCACCTTGAAGGGCTAACTCTGTGGCTGCTTGCTCAACCTCCAGAGTTGGAGACGATGGAGGTGACAACCGTGGCTTGCGTTTAGTGGATGCTCCAGAAAGCAGTTTCAGCAAACCCTTTTTTTCTTTCTGTAAGCAAAGGGCAGTG ...............:..:.x:..:..:.....:........x...x.......x..:..:.x.x.x..x..x.....x..x..x..:.:x..:..:...........:.::....xx..x..x::x.....x...:.x----------...--------.x....------..x.x...x:::..:...:xx..x..:....:...:..x..xx...:...x..:..x.....x..:..x..:..:..:.xx.:.....::x:xx.:x....x..:..:..:..x..x..:.x......x....xx..x.....x...........x..x..........::....:.....................x..:x...::::.:.. 139M10D3M8D6M6D213M 258/361 71.5% 361/94230402 0.0% 24/361 6.6% 101486471 88728084 +15859 chr4 + 190214555 169117511 169117510 169117791 281 GTTCCTCCTTACCTGTCCTCACAGCATTGCGGGCCTGGTTGACTGTCATTTGCCCCGTCATGTGCAACAAGACCTTAGCCTGAGGACTTGTCTGGATGTGAGCTGCTGATACCACAGCTGCGGGGACAACACTGGGACTCCCAGCCACGCCATTTCCCTGGAGCTTCTGGGCAGGCCCTCCTGCCGTGGAAGGACTGACCATGGTCACTCCCCGACTTGTCTGGCCAGCTGTAGACATAGGGACTTTAGCTTGGGAAGCATTTGTCACCGCCCTGCCAAGA chr4 - 94230402 67626775 67626774 67627055 26603348 26603347 26603628 281 GTTTTCTTTTACCTGTTCTAACTGCGTTGCGAGCCTGGTTGACTGTCATTTGTCCTGTCACGTGCATAAGGACCTTGGTTTGCGGGCTAGTTTGGATATGTGCTGCAGAAACCACAGCTGTGGGTACAGTGCTAGAGTTCACTGCCACACCGTTCCCCTGGAGCTTCTGAGATGTCCCACTAGCAGTGGAAGGGCTGACCACAGTTACCACTCGTCCTGTTTGACCAGCAGTAGACATGGGAACTTTCGTTTGAGATGCACTTGTCACTGTCCTGTCAAAA ...:::::........:..x..x..:.....:....................:..:....:.....xx.:......:.::..x..:..x..:.....:..x.....x..x..........:...x...:::..:.:::..x.x.....:..:..:..............:.xx.x...x.:x..x........:.......::..:..:x.:..x.:...:..:.....x........:..:.....x.:...:..x...:.......:.:....:...:. 281M 209/281 74.4% 281/94230402 0.0% 0/281 0.0% 101490736 88723819 +12889 chr4 + 190214555 169120805 169120804 169121007 203 ATTCAAAACCATACCTTGTGACTGGTGCCACATAATTGCCAGGGAAAACCCCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCTCAAACACTAAAAACATCTCCCCTTTTCTCAGCTCTAGTTCATCCTCTTTCCGAGGAGTGTATGGATATATAGCAACATACCTAGAATAGAAAATAATA chr4 - 94230402 67627182 67627181 67627384 26603019 26603018 26603221 203 ATTTAAAAATATACCTCGTAGCTGGAGCCACATAATTGCCGGGAAAAACACCAATCTTGCTCGTGTGCATGGAAGTTCCCTTGAACCAGCCATCTTGGCAGCGTTCAAATACCAAGAACATTTCTCCCTTCCGCAGTTCGAGTTCATCCTCTTTTCGAGGAGTATAAGGGTATATAGCAATATATCTGAAAGACAGGAAAGTA ...:....x:......:..::....x..............:..:.....x..x........x..:........x..:..:..............:........:.....:..:..:.....:..:..:..:.x...:..x..............:........:..x..:..........:...:..::..x.x.::.x.:.. 203M 161/203 79.3% 203/94230402 0.0% 0/203 0.0% 101493623 88720932 +4097 chr4 + 190214555 169120832 169120831 169120976 145 CCACATAATTGCCAGGGAAAACCCCTATCTTGCTGGTATGCATGGATGTCCCTTTGAACCAGCCATCCTGGCAGCGCTCAAACACTAAAAACATCTCCCCTTTTCTCAGCTCTAGTTCATCCTCTTTCCGAGGAGTGTATGGATA chr4 - 94230402 67616532 67616531 67616675 26613728 26613727 26613871 144 CTACAAAGCTGCCAGGGAAAAGGCCAGTTTTTCCATTTCGTTGCAGAGTGCCTTTGAACCAGCCATCCTCACGTTTTTTATGTACAAATACAATGTCACCTTCTTTAAGTTCGAGTTCTGCTTCACTCTGAGGAGGATA-GGATA .:...x.::............xx..x:.:..x.::x.x:.:xxx::x..x...................x:.:x:x:.:.x::..x..x.xx..x..x....:.:.x..:..x.....xx.:..x:..:......x:..-..... 139M1D5M 91/144 63.2% 144/94230402 0.0% 1/144 0.7% 101504300 88710255 +24738 chr4 + 190214555 169122092 169122091 169123110 1019 TCACTTACACACTGGGGCGAGTCTGCGGCCGTAAATGTGCAATCTGGTCAGTGGATCCTGCCATGGGCCTCGGTCCCATTCCAGCAGCAGCAGCAGCGGCGGTGGCGCCTGGTGGTGTGGAGGCAAGGACAGTGGCAGCCAGGAGAGGGGGTGGTGGAAGAGGAGGATTCAAAGTCTAGTAT----AGGAAAAACATAAAGAGAAAGGGAAAAAAGGGAACAAAAT------ACTGATTTACATCTTCCTATGGAAGGTGGGAGAGAAAAAGAATTATAAATCCATAGAACAAGACTTTAATGGAATCCA------CACAG------GGCAGAATCAGCAGGCTAACTGATATGAAAGCCTGCTTCTACAAATTCATCTCTTGTTCTCCTTTAAAATATTAAAGCCAAAGCAACCTTTTCAGCAAGCAGGTAAGTAATCACCCTTGGGAGGAGGGAAAGAAAAAAAATGAAACAATTGCATGTAATCTTAAGATTAATAGCATTTTAAAGTATGGACTTGGACAAGGATCCAAATGCCTTTCGAGGCGGGTAGCCATG--TCATGCTGCTTGCTAGGAATTAATTTGTGATTGTTTCTGTAATCTGAAACTTAAACACAACACACAATGTAGCTGTACTATATCTCAAATCATTCCT-TCAGAAGAAAATTTCCTTTGATGCCTGGTCTACAAAAAGCCCAAACAATAGTAAGCCACAGTCACTGGACCATTGTTGCTACTTTTGCTTATTCTTTTCTTAACTTT-----GCCAGCTTTTGAAATTTGGTACTATCGAGGCTGGTAATCTTTAACAAGTACACCAGTGAAAAGCTGCTGGTTCCTTTATGGGCACAGCCTAAT-GGGGTTCTGCCTACAGGATTCCATGCCTTTTGAAAATCAATGGAGCAATTGTTACCTTCTGATCTATAAA--CCCAGATAATTCTTTAGG-GTCTGTATACTGAAACTCTTGGGAAAACAGGCACACAAAGACTGCCTGAACCGCTACCTCGTCCTCTCCAGA-----TCTTTG------AACAACTAGATGTAAAAACT chr4 - 94230402 67628986 67628985 67629974 26600429 26600428 26601417 989 TTACTTACACACTTGGACGAGTTTGTGGTCTTAAATGTGCCATTTGGTCAGCTGATCCTGACGCAGACCTTTGAATTACACCTGCAG--------GCTGAGGT----CCAGAAGAAGCTGATGCAACAACTGCAGCAGACAG---AGGTGGTGGTGGAAGTGGGGGATTCATATTCTGATATTTTGAGGGGGAGAAAAAAAAAAATCAGCAAATGATGAATATTTTTTTCCAGCTGATTCAACTCATCAGAGAAAAGTATGACGTGCTAAGGAAGCAAACA-------AACAAAAAACCAGTGAAGTTCAACATTCCACTGCCTACTGGTAGAATAGAGAGTTTGGATTGCCTGTA-TTTTGCTTTTTCAAGTTTAGATCTTGAAGTCTTTCCAGTTAATTAAGCAAAGG-------------------ACGAGTAATC-----TTGGAGGA----------AAAACTGATGGCATTGTTTCTAATT---------ATAACATCTTTTAGGATAGGACTCAATAGAAATTCAGAAGCCTTCCAAGGAGGCTGATTTTGCATCCTACTGCTGACTGTACTTCAAAACATTATTGTTTTTGTAACCTGAAGCTGAAACATAATATACCATTCGAGAGCAGTGCACCCCAAACCACCCCTCTTGGGGGAAAATTTCTTTTGATGTATGGGTAACAAAAAGCAAGCACAATATGAGATCATAGCAAATGAGCTATTGTTACTGCTTTCACTTATTCTTCT----AGTTTAAAGAGTTAGCTTTTGAAATTCAGTATTATCAAGATTGCTAATTTTTAACAAACGCTCCAGTAAAAAGGCAA-AGTTCCTTTACAGGCAGATATTAACAGGGGTTCTGCCTACCGGATTCTATGCCTTTTGAGACTCAATGGAGCAATTGTTACCTTCTGCTCTATAAAGCCCCAGACGATTCTTTAGGAGGTTGTGTACTGACACTCCTGGGAAAATTATCAAAGAAAAG----CAGAACTTTTCTTTCCTCCTTCCAAAAATAATTATTTGGATTACAACAAACAAATGAAAAACCT .:...........x..:.....:..:..:.x.........x..:.......:x.......x.:::.:...:x.xx::.:x..x....--------..x.x...----..x.:x.:x.:x..x....x:..x.::....x...---...x...........x..:.......x.x...::...----...:::.:x.x...:.:..xx:.x...x::x...:.xxx.------:......:.xx..x..xx.x::...xxx.:x.x.xx..:...x:.x.x.-------.....:.xx::.:..:.:.:..------...x.------..:.....x::x..x:.::x.x::x..x.-x::.....:.x...:..:.xx.....xxx..:..:x.:x..x.x....x..:.-------------------:::.......-----.x......----------....x...x:xx....:x.x....:---------...:...:..xx..x..:.:x:.x:.:.:::..:..:.x.....:.:...x..x.::::x..--..x.:.....x:..:x:xx.:..xx::.x.......:.....:.....:..x.....:..:.:..x..x:::xx.:.x.::.:.:....:..::...-.::.::.........:.......:x...x:x.........xx:x......xx.:::..:..:x.x..::.:......:..:....::.........:.----.x...-----.::.............::...:....:..::..x....:........:::.x.....:.....x::x-:.........::....x.xx:...:-..............x......:...........:.x.........................x........--......::..........-.x:...:......x....:........:x:x..x.x...::----.x....:x:.x::..x....::.x.:.-----.x....------.....x:.:...x....x.. 87M8D8M4D35M3D37M4I40M6I49M7D22M6I5M6I29M1D53M19D10M5D8M10D25M9D62M2I97M1I98M4D5M5I67M1D25M1I70M2I18M1I41M4D27M5I6M6I20M 632/944 66.9% 989/94230402 0.0% 120/944 12.7% 101493106 88721449 +3052 chr4 + 190214555 169129249 169129248 169129299 51 CAAAGCTTTGGCCTGGATGAGAGATGTCTCACAACTGCTAGTTCCTTGCTT chr4 - 94230402 14677512 14677511 14677562 79552841 79552840 79552891 51 CATAGTTTTGGCTCAGATGAGAGATGTTTTAGAACTGCTCATTCCTCACTT ..x..:......:::............:.:.x.......x:.....::... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 154451737 35762818 +9289 chr4 + 190214555 169130033 169130032 169130188 156 AAACTATACTCACTCCAAGGGCAGCTTGGTAGGGAACATCTGATGGGAAAGTAAACGAGGGGCCAGTTGTCACTGGGCTGCTTGGGGGCGGGGTCACAATTAACCCGGTGGTACTTATATGAACCTGCCGAGAAAAGAAAAGTTATTAAAAAGAAG chr4 - 94230402 67635969 67635968 67636117 26594286 26594285 26594434 149 AAACAGTACTTACACCAAGAGCAGCTTGGTAGGTAACTTCTGATGGGAAGGTAAATGAAGGCCCTGTTGTGACCGGGCTGCTGGGGGGTGGAGTCACAATTAGCCCTGTAGTACCGATATGAACCTGTTGGGAAAAAAAA-------AAAAAAAAG ....x:....:..x.....:.............x...x...........:.....:..:..x..x.....x..:........x.....:..:..........:...x..:....:x...........::.:.....:...-------.....:... 140M7D9M 122/149 81.9% 149/94230402 0.0% 7/149 4.7% 101494064 88720491 +18965 chr4 + 190214555 169136314 169136313 169136628 315 TTACCTGAGAAGGGGCACTGCAGGAGAGCCCAGACAGCTCGCTGATCCGTGCAGCAGCAGTGGGGTTGCTGGAGCTGATGAGGACAGGGGGGCTGATCTCCATGGAGTGGCGGTTCTGGGATGCCTGGGAGGACTTGTTGGCCATAGTGAGGGAAGTGAAGGAGTGCCGCTTTTTGGTGTTCTTCTTGGTGTCGGAGTGCTTTGGGGCAGTGCTGCTCTGGGCTGCTGCCGAGGAACATTCTCCAGCATCAACTCCTGGCACAGGAGGCTTATCCCATTCTATCAGCTGCTTAGCAGCCGAGTTAAACTGCAAAA chr4 - 94230402 67636864 67636863 67637178 26593225 26593224 26593539 315 TTACCTGAGAAGGGGCACTACAAGAAAGTCCCGTCAGCTCACTTATGCGTGCTGCTGCAGTTGGGTTGCTAGAGCTGATGAGGACAGGAGGACTAATTTCCATCGAGTGGCGATTCTGAGAAGACTGTGAGGACTTGTTGGACATCGTGAGGGAGGTAAAAGAGTGTCGTTTTTTGGTGTTTTTCTTAGTGTCGGTGTGCTTTTGGACTGAATTGTTGAGGGCTGCCCCAGAGGTACCTTCTCCAGAGTCTACAGCAGAACCTGAGGGCTTATCCAATTCTATCAGCTGCTTGGCTGCTGTGTTAAACTACAAAA ...................:..:..:..:..x.x......:..x..x.....x..x.....x........:.................:..:..:..:.....x........:.....:..x.x...x.............x...x........:..:..:.....:..:...........:.....:.......x.......x..:.x.x::..:.xx.......:x.x....x..x........x:..x..xx.x.:xx.x.::.........x................:..x..:.x........:..... 315M 250/315 79.4% 315/94230402 0.0% 0/315 0.0% 101499450 88715105 +9056 chr4 + 190214555 169155466 169155465 169155654 189 ACAGATTAATTTACCTCAACATATGAAATTGGAAATATTCCTATTTTGTCTGCCAGCATTCCTTCAGCCCAGTTTTCATCCACTCTTCGGATCACAGTCAGAACATCATCCTGAAGAAACAGCAAATCATTA-ATCTACCTGATCATTAAGCTGTACCATTAAGCTTGTCATTTAATTTTCCTTTTCAAT chr4 - 94230402 67644178 67644177 67644356 26586047 26586046 26586225 179 ACAGCACAACTCACCTCAACATATGAGATCGGAAATATTCCTATCTTGTCAGCTAGCATTCCTTCTGCCCAGTTTTCATCCACTCGGCGAATTACAGTCAGAACATCATCCTGTGGGAACATGCAGTGATTACGTCTCCC---------AACtcta--attaaatttctaattaaatttcCCTCCATAAT ....xx:..:.:..............:..:..............:.....x..:...........x...................xx..:..:....................x:.:....xxx.:.x....-:...x..---------.:..x..--.....::..x.x...x.....:...::x:... 132M1I7M9D7M2D32M 141/178 79.2% 179/94230402 0.0% 12/178 6.7% 101511288 88703267 +22991 chr4 + 190214555 169156391 169156390 169156699 309 ATTCTACCTTTACCTTTGCAAATGGAAGGCAATCTTTGTCTGCTTCCTTGTCTTTCACTTCAAAGTCATAAAGTGCTTTGCACTGAGGTGGGGGCTGAGGTAACGGTTTAATAATCTGCACAAAGTTGGTGGGGAAAAAGCCATGGATTCCATTGACTTCCCCATGGTACCAATTTTCATCCACTTGTCTTCGCAAAATGATGATGTCACCTTTGCTGAATTTAAGGTCTCCAGGCTCTTTTCCTTCATAGTTGTATAATGCTTTGGCACATGGTAACTGAGGTATACCCTTTAAAAAAAAAAGAGGGA chr4 - 94230402 67645595 67645594 67645903 26584500 26584499 26584808 309 ATTCATACTTTACCTTTGCAAATGGTAAACAGTCCTTATCCGCTTCCTTGTCTTTTACTTCAAAGTCATAAAGTGCTTTGCACTGAGGCGGAGGTTGAGGTAAAGGTTTAATAATCTGAACGAAGTTGGTAGGAAAAAAGCCATGGATGCCATTGACTTCTCCATGATACCAATTTTCATCCACCTGTCGACGCAAAATGATGATGTCTCCTTTACTGAACTTAAGATCTCCGGGTTCTTTTCCCTCATAGTTGTACAATGCTTTGGCACATGGTAACTGAGGTACACCCTACAGAAGAAGAAAAAGAA ....xxx..................x.::..:..:..:..:..............:................................:..:..:........x..............x..:........:..:..............x...........:.....:.................:....xx.................x.....:.....:.....:.....:..:........:...........:............................:.....x:.:..:..:..:.:.:. 309M 267/309 86.4% 309/94230402 0.0% 0/309 0.0% 101510796 88703759 +6623 chr4 + 190214555 169160676 169160675 169161225 550 GGTCAAGTTTCTAAAAAGAAGGCTTCCCACATTAAATAAAATGAATTCTACTCTGATTTTAAATCAAGCAAAGTTCAGTGATCTTTGAAAGACTTATTCCCACACAGACTGCAGATGATTAAGGATAAACGGTTAAACGACTTGGAAAAGCAATAAAAGAACACATTTTCCTTTTGCAACATCTGAAAGATAAAGCCAAAACAATTGGTTTGATAGCCTAGGACTACTCTGTGGATAAAATATGTCTGGAGCCCATGGAGGCACTGCCCTCTCATTCATCTCCTTCGAAAGGTCTGAGAGTCATGTCATC-ACTGGGCCCTCTGCCCTCCAAGCCTTCTGCAGGCTTTCCAAACTGCTGCTTTTCTTCTGTATCCTCTCATCAGGCCAA--GGCCCCCAAG--------GATCCACAGAGCTTACATTTCACTTGGAGACTTTCACTTGGCTACACATGAAAGGGATGCTTAAAAGGAGAGAAAGCCAAAGAGAAACCGACTCTGCAGTCTAACCTTGGGTTTGCGGCTTGTCATTCACACTGCCAGCTTTATCAAAAAGC chr4 - 94230402 67647957 67647956 67648415 26581988 26581987 26582446 459 GGCCGAGTTTCTCCAAAGCCTTTTCACAGCATTAAATAAAA-----------ATGGTTCCCAAAAGAACAACGTTCAGTGAAAC---ACAAGCTTATCCTCAGCCAG-CTGCCAACAACTAAGGATAAGCACTGAAACAATTTGAAGAAGAAAGACAAAAAC-----TGCCTTCTGCAATAGGCAGAGGATGAGGCAGGAACGAAGTGCTGCACA--CAGGCAC----CCGTGCTCAGGACAC------AGCCCACGGGG---CTGCC-------------------ACAGGTCTCGG--CCACGGCACCCAACAGCCTCGCTGCTC---------------GGCCTCCC---------CTCCGCCTCTCGGCCTGCTCACCAGGATAGCCGGCCGCCGCGATAATGCTGAGCCA--GAGTTTCCAGCTCACTCCCTGCCTTTCGCTTGGCTACACATGAAAGGAAGGCTTTGGAAGAAA------------------AACTTTGCAGGCTACCCTGAGGTTTACAGC-TGCCATTTACCCC-CGAGCTCTTTGAGAAAGC ..:.:.......xx....xxxx:.:x.x:............-----------x..:..::x..xx:.:...x.........xx:---.x.::.....:.:..xx...-....x:.::.:.........:.:x.x....:.:...:.:...x..x.x..:...-----.x....:.....:.xx:::.:...:.:..x::...:.xxx.:.xx.:.--.x:.x..----.:...xx:.::.:.:------......:..:.---.....-------------------.x......x:.--:..:.x..:.-.x::.x.:.x....:.---------------...:.:..---------..::x.:...xx::.:x....:....x:.:--....x..:x.--------..x...--...:..x..x:.....:xxx.x.....:...................:.x....x::.:..:.------------------:...:.....x...x...x:.....:.:..-..:....:..x.:-.x....:.x.x.:..... 41M11D32M3D20M1D54M5D48M2D7M4D15M6D11M3D5M19D11M2D10M1I16M15D8M9D30M2I10M8I6M2D63M18D30M1D13M1D18M 295/448 65.8% 459/94230402 0.0% 113/448 25.2% 101512719 88701836 +3605 chr4 + 190214555 169183356 169183355 169183438 83 CTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAAGCACTTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:.:...........x...x.xx..........::.:.........:.:....x.::.--:....::.. 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 150986230 39228325 +3217 chr4 + 190214555 169185425 169185424 169185468 44 AGAAAAAACAAAACAAACAAACAAACAAAAAACCCACAAAACAT chr4 - 94230402 78618251 78618250 78618294 15612109 15612108 15612152 44 AAAAATAACAAAACAAACAAACAAACAAAAAACCCTCCGAACAT .:...x.............................x.x:..... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 90567174 NA +7517 chr4 + 190214555 169208226 169208225 169208438 213 CAAGTAATAGCCGTTTCTGTCCAGAGTTTAAATGACCTCTGCCCT-TCCACCCACTTTATCTTCTATAGGAATTTCATTCATCCTTTTGTTGCCCACTGGAACACATTG-TGCCCTCATTTTCCCTCTCACTTTTAATCATATGCCTAAAGAAAGTCTTGTA-----ATAGGCAAAGGAAGCAGCAATGGGTAGGGGAGAAAAGATGAAAATTAAGTCCT chr4 - 94230402 67664680 67664679 67664899 26565504 26565503 26565723 220 CAGACAATAGCTGCTACTGTCCAGCGTTTAAATGACCTCTGCCTTGCCCTCCTACTTTGTTTCCCTTAGGAATGTCATTCATCCCTTTGTAGCACATTGCAACTCATTATTGCCTTAGTTTTTCCTGCCACTTTTGTTCAAGTCTTTAGAAGAGCACATATATACTCTCAGATGAAGGCAAAAAAAAAAAAGAAGAGAGAGAAGGAAATCATTAGGACCT ..:::......:.:.x........x..................:.-:..x..:.....:.:.:.:x.......x..........:.....x..x..:..x...x....:-....:.x:....:...x:.......:x...x:.x::..:.::.:xx.x.:..-----x:..:::....x.:x.:x..x:::x.:.:....:...:x:.xx....:.x... 45M1I63M1I52M5I53M 143/213 67.1% 220/94230402 0.0% 7/213 3.3% 101543546 88671009 +3123 chr4 + 190214555 169233245 169233244 169233295 51 TCTCAAAAAAAAAAAAAAAAAAAAAAAAACCGTGGTTTACTCAGAACAGTT chr4 - 94230402 73333960 73333959 73334010 20896393 20896392 20896443 51 TCCCTAAAAAAAAAAAAAAAAAAGATAAACTGTGCATTGCTTAAAACAGTT ..:.x..................:.x....:...xx..:..:.:....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 95899285 NA +5268 chr4 + 190214555 169246519 169246518 169246684 166 AGTAGAAAAAGATAGGCAGGCCTGAGGGTGTGACTGTCTATTTAAGCATGCAACTGTATTTTAAACATAATTAGA---CTAATT--GCCTCCCAATCTTAGCTGATGCATCTGCACATGCAATTAATTAGAA------CTGATTTTAAAAGACCTGTTTGGAATCCTTTGTTCCCCA chr4 - 94230402 64130139 64130138 64130309 30100094 30100093 30100264 171 AATGGAAGCAGCCAGGCAGGC-TGGGGGAGTGGCCATCAGTTTATGCACACAACTGCATTTTCAACATAATTAGCTGTCTAATTGAGCATTATAAT-TTAACTGACACATTTAAACATGTAATTTATTTGAATGCATGCTGCTTGTA----ATCTGTTTATAATGTTTTCCTCTTCA .:.:...:x..x:........-..:...x...:.::..x:....x...::......:.....x...........x---......--..x.:x:...-...:....::...:.:x.....:....x...x...------...x..x..----.:......:x...x:...x:..::.. 21M1D53M3I6M2I10M1D35M6I9M4D26M 117/160 73.1% 171/94230402 0.0% 17/160 10.6% 105116380 85098175 +3200 chr4 + 190214555 169255576 169255575 169255651 76 CACACATGTGCATATGCATGGATACATACACACATACATACACACATACACACACACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..::::...:::.:.....::.:.::..:x:.....::..::.x:.:.:xx.:.................x..... 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 160859789 29354766 +3435 chr4 + 190214555 169255579 169255578 169255645 67 ACATGTGCATATGCATGGATACATACACACATACATACACACATACACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .::........x:....x..x:.:.:.:::..:.x....:xx...................x..... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 160859783 29354772 +3531 chr4 + 190214555 169255580 169255579 169255672 93 CATGTGCATATGCATGGATACATACACACATACATACACA--CATACACACACACACACACACACACACACACACACACACACACAGAGTCCAGA chr4 - 94230402 8395787 8395786 8395881 85834522 85834521 85834616 95 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAA ......::....::..x...x.:.:::.:x......:::.--.x....:xx.:.................x.....x.::x.:.x.:.::...:. 40M2I53M 62/93 66.7% 95/94230402 0.0% 2/93 2.2% 160859793 29354762 +3034 chr4 + 190214555 169255586 169255585 169255661 76 CATATGCATGGATACATACACACATACATACACACATACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:..::.:x:.::::.:.x....::..x:...:..::.::.x:...:xx.:.................x..... 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 160859799 29354756 +3411 chr4 + 190214555 169255588 169255587 169255659 72 TATGCATGGATACATACACACATACATACACACATACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:..:...x:.:....x...::..:x....:.::..::.x:...:xx.:.................x..... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 160859797 29354758 +3125 chr4 + 190214555 169255589 169255588 169255665 77 ATGCATGGATACATACACACATACATACACACATACACACACACACACACACACACACACACACACACACACACAGA chr4 - 94230402 8395788 8395787 8395864 85834539 85834538 85834615 77 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAA ...::..x..:::.:..:.x.:.::..:x:.....:::.::.x:...:xx.:.................x.....:. 77M 49/77 63.6% 77/94230402 0.0% 0/77 0.0% 160859801 29354754 +23620 chr4 + 190214555 169268789 169268788 169269385 597 ATTCACCAAACTACCTCTGTAGGCTACTTACCCTCACTGGGGGGCTCCAGGATTGCACCCGAGGCTGCTGTCCGCCCTGGGAGCTCTGCAGATCTTTTGAGCTACAATTAGCCACAGTGCTGCTCTGAGACCTTAATGCATTTGTGCAGTTGGTCCCACTTCCCCCACCAGGACCAGGTTTCCAAGGCCTCTGTTTGATGCCATCCAGAAGTCTGACCAGCAAGATGTTACTGGGAAGCTCCTCGACACCCGAGCCAACAAGAGTCCTGCACTCGGGACATCTGAGTTCATTTCGAGAACCTACGATCCCCAGCAAACATCGCTTGCAAAACGTATGCTGGCAAGGCAAGACCTTCGCAGAAGCATCAAGGCGCTCTAGACACACCGGACACTCCAAAAGATCCAACAAGGCTGATTCATCCATCTTTATC----TACTTTACTGAGAA--AAAATCTTCAGAAATGTTCATAGTTGTGTGCATC-----CCTTAAAATGACTCATGTAACATCCAT-----TTCAGACTTTGCTCTAGAGTCAT---GGGGAAAAGGG-------------GGAAAAGAGAACATGAGTGT-TGTTATCTAGGGAAAAAGTTCAAAGGAGCCAAGAATC chr4 - 94230402 67686736 67686735 67687345 26543058 26543057 26543667 610 ATATACCACACTCCCTC------CTACTTACCCTAACAGGAGGGCTCCGCGCTTGCACCCTTTGCTGTTGTCCAGCCTGAGAGCTCTGCAGGTCCTTGGATCCGCAATTAGCGACAGTGGTGATGGGGACCCTTAAAGTATTTGCAC------CCCCCGTCCCACCAGCAGTGCCGGGCTTCCGCGGCCGCTGCTTGATGCCATCCAGTAGTCTAACAAGCAAAATGTTGCTTGGAAGTTCATCAACACCGCAGTCCACTAAAGTCCTGCACTCCGGGCAGCGAAGCTCATTCCGAGAGCTCACGATACCCAGCAGGCAGCGTTTGCAGAACGTGTGCTGGCAAGGCAAGACTTTCGCCGAGGCATCGAGGCGCTCCAAGCACACAGGGCACTCCAACAGATCCAGCAGAGCTGATTCATCCATTTTCTTCGCGGCGCTTAACCAAAAAGCAGAATCTTCGCAGA-------ATGTGTGTGTTTCGAGGGCTCCAGGGCTA-TCATGTTACATCCATTCCTCTTCTGGCTGCGCTCTGAAATTTTTTGAGGGAGAAAGGCATTAAGAAGCTTGAAAAAGAGTCAATGGGTCCATTTTCCCTAAAGACATTCCTACAATGAGCCAAACACC ..x:....x...x....------...........x..x..:.......:x.x........xxx....:.....:x....:...........:..:..x..x.::........x......x..x.xx.::x......x.:.....::.------:...xx.:..x...x...x:..:..:....:x....x...:..............x.....:..x.....:.....:..x.....:..x..:.....xx..:.x..x.:............x..:..x.x:..:.....:.....:.::.....x.......::..x..:.....:.....:.................:.....x..:.....:........:.::.....x..:........x.......:..::..............:..:x..----::...x..::.:..--.:.......:x.:.-------.xx......:x..-----.:::.::::x.-......x........-----...x.:..x:.....::.:.:x.---:....:..:..-------------.:.......xxx...:..x:-.x..x:...::..x.xxx:.xx..x.......:x.:. 17M6D124M6D278M4I14M2I14M7D13M5I11M1D15M5I23M3I11M13I20M1I37M 422/577 73.1% 610/94230402 0.0% 53/577 9.2% 101582053 88632502 +3096 chr4 + 190214555 169269223 169269222 169269265 43 TTTACTGAGAAAAAATCTTCAGAAATGTTCATAGTTGTGTGCA chr4 - 94230402 34980755 34980754 34980797 59249606 59249605 59249648 43 TCTACTGAGAAAAAATCTTCAGAAATTTTCTCAATTATGTGCA .:........................x...x:.:..:...... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 134288468 55926087 +3268 chr4 + 190214555 169283578 169283577 169283654 77 AAAGTTCTTCATCTCCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCT---CGCTCTGTCGCCCAGGCTG chr4 - 94230402 8076771 8076770 8076850 86153553 86153552 86153632 80 AAAGCTCTGCATCTGCTTTTCTTTTCCTTTTTATTTTTTTTCTTTTTAGCTGAATTATGGCAGCTTTTTTTCGTAGGCTG ....:...x.....x.....::...:......x........:....x..x..:.x.x.---x...:.x.:x.x:...... 58M3I19M 57/77 74.0% 80/94230402 0.0% 3/77 3.9% 161206807 29007748 +3126 chr4 + 190214555 169294431 169294430 169294521 91 TTGAAGATACCTCAGTAGAAACCTCCCAGACTAAAGAGCAAACAGAAAAAGAAGACTGAAAAAAAAAACAAAAAACCAGAACAGAATATCC chr4 - 94230402 23647445 23647444 23647535 70582868 70582867 70582958 91 TTTAATATTTCACTGCAGAAGCATCTTGGGAGAGGGAAAAAAGAAAAAAGGAAGAATGAAGAAAAGCACTAAAAATGAGAACATGAAATCC ..x..x..x:.x.x.:....:.x..:::.:xx.::..:x...x.:....:.....x....:....:x..x.....:x......x:.x.... 91M 59/91 64.8% 91/94230402 0.0% 0/91 0.0% 145646986 44567569 +3005 chr4 + 190214555 169309089 169309088 169309146 58 GAGGGAAATAATTGAAATGATGTAACATAAAATACTATAAAAGTTATATTTTGCATAT chr4 - 94230402 25102390 25102389 25102447 69127956 69127955 69128013 58 GAACAAAATAATTGGAATGATTATGCTTTAAATACTATGAAAGCTATATTCAGCATAT ..:x:.........:......xxx:.x.x.........:....:......:x...... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 144206699 46007856 +3008 chr4 + 190214555 169349319 169349318 169349386 68 TGTATACACATATGCATATGTATATGTATACACAAACATATATATATACACATATATATGTATATATA chr4 - 94230402 88029573 88029572 88029640 6200763 6200762 6200830 68 TGTGGACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAATA ...:x...xx...::x.....:.:x:x.............:...x............::::.x.x... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 81319746 NA +3058 chr4 + 190214555 169349319 169349318 169349391 73 TGTATACACATATGCATATGTATATGTATACACAAACATATATATATACACATATATATGTATATATATATAA chr4 - 94230402 52481236 52481235 52481308 41749095 41749094 41749167 73 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAA .::..:x.:...x..:..::.:..........:.x:..:...:xx...:.x.:x.......:.:.x....... 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 116868083 73346472 +3066 chr4 + 190214555 169365824 169365823 169365867 44 CTGGCCAGTTTTCTTTCTTTTTAATTTTTTTTTCTTTTTTTTTT chr4 - 94230402 19885179 19885178 19885222 74345181 74345180 74345224 44 CTGAGAAGTTTTCTTTCGTTTTAATTCTCTTTTCTTTTTTTTTT ...:xx...........x........:.:............... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 149480645 40733910 +3320 chr4 + 190214555 169370800 169370799 169370874 75 TATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCC chr4 - 94230402 71630135 71630134 71630209 22600194 22600193 22600268 75 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTC ..::.::..::.....:.:.:.:.x.....:....x.x.:....::.....x..::....x:.:.......x.:. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 97740665 92473890 +3138 chr4 + 190214555 169370801 169370800 169370934 134 ATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTATATA-GATATTAATAAGATAGG----TATATAGATATACAGATCCTATTGGTTCTGTTTCTTT chr4 - 94230402 19704274 19704273 19704406 74525997 74525996 74526129 133 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT-----TTTTCAATCTACAATATTTTCAGGAAAGTGTCCTCTAGGTTTATACAGACTATA-TAATACTGTTTTTTT ..x..x...:.......::.......x.:.:...:.x:..:............x:.x.xx....-----.x.:.x..x..-:.....xx:.:..x..x----.x..x:xx........::x..-.::.x......:... 64M5D11M1I17M4I21M1D15M 88/128 68.8% 133/94230402 0.0% 11/128 8.6% 149666527 40548028 +3343 chr4 + 190214555 169370815 169370814 169370867 53 ATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.......x.....:...x::.............. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 149666541 40548014 +3458 chr4 + 190214555 169370817 169370816 169370875 59 ATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCT chr4 - 94230402 19704274 19704273 19704332 74526071 74526070 74526129 59 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTT ..x..x...:.......::.......x.....:...x::..............x:..:. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 149666543 40548012 +3230 chr4 + 190214555 169370819 169370818 169370871 53 ATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::.....:.x.....:...x::.............. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 149666545 40548010 +3596 chr4 + 190214555 169378772 169378771 169378845 74 CTGCAGCCTTGATTTCCTGGGCTCAGGCGATTCTCCCACCTCAACCTCCCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x:.:.....:...:.:.x...x.xx:x....:...::.........:.:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 151181646 39032909 +15441 chr4 + 190214555 169400217 169400216 169400674 458 AATCTTACCTTCTTGGTAGGCTCCATCTGCCATGACTAAATGAAGAATCTTGGCATAAAGATGCTGATGTTCATTTCCCAAAATATTTTGAACTATTTTTGAACAAATTTCAATATTTTCATCTTCATCTTCATGAATAGCCT------------ATACCAAATTCCCAAATATAAATTAATATTTGAATA---------ACTTTCTGTAATTGCAG------------------ACTTCACTTTTTA---------------------------TTTA---------------------------------TAATAAATCTAATGAC-CAATACAGATTATCA------------------------ACATTTCTTCAACCTTCAAACATAGCACATTTTAAGTGTTTTAATTGACT---TTTCACTTACCTTTATTTTCTCATAAACCTCAAAGAATTTTTCAAAGCCCATTTCCTGCTCCAGATGAAGTCTCAGTTCCTCTAAATGGTTAAAGACACTATCGCA---TTCACATTCACTAGCAATTTCACCATCACTGTTATCT--------AAAAAACAAAATTAAAATAGA chr4 - 94230402 67708002 67708001 67708585 26521818 26521817 26522401 584 AGTATTACCTTCCTGGTAGGCTCCATCCGCCATGACCAGGTGAAGTACTTTGGCATATAAGTGTTTGTGTTCATTTCCCAGAATAGTCTGAACTATGCTTGAACAAATATCAATATTTTCATCTTCATCTTCATGTATGGCCTGGGAGAAAGAACAATCCACGTGGTGAGGTCTAAAATAGGTTTAGAATAAAAGAGTTCAAATTTACTAAATGCAGTCTATTGCTAACCCCAAAGCTTTCCTCTTTAATCCAGTGGAATTTTCTGTGTTAATATTTTAGGTGTGCTGAAACAAAAAAGCTCAAGAAATAAGCATTAATTCTAGCCACACGATGCAATTTGTTACTGGCACACTATGCAGCACTACATACATTTGTTTTGTTCCCTAAAACAGC------------TTCCAGTTGAGTTTATTCCACAAACCTTTATTTTATTATAAACTTCAATTAATTTCTCAAAGCCTATTTCCTGTTCCAGGTTGTATCTCAGCTCTTCCAAATGGCTGAAGACACTATCACATTCTTCACATTCACTGGCAATATCTCCATCACTATTATCTGTAAAGAAAGAAAACAACAGTAAAAGAGA .:.x........:..............:........:.::.....x.::........x.::..:.x:.............:....x.:........x:..........x..........................x..:....------------.xx...x:.xx:x.::.x....x..:xx..x.....---------.xx..:xx...x.....------------------:...:x..:....---------------------------....---------------------------------:.x...x....::x..-.:..:..:x..:.:.------------------------......x..:x:::::.x..x.:...------------..::.:....x.---..:...xx...........x.:......:....xx.....:........:........:.....:.x:x:......:..:..:......:.:...........:..---............:.....x..x........:......--------.:.......x.x.....x... 143M12I36M9I17M18I13M27I4M33I16M1I15M24I26M12D12M3I106M3I37M8I21M 339/446 76.0% 584/94230402 0.0% 150/446 33.6% 101692215 88522340 +10936 chr4 + 190214555 169401647 169401646 169401866 220 TGCACCTGAGTGCCATTCTTCGTTCAGGGCACTTTCACTGCTGGGATTGTCATCTTCATCTGCCACATC------TGTCCCATTTGCAGTTGGCTCCACATCACTGTTCTTCAAGACTGACTCTTCTTCTTCACTGTATTCTTCACCAGGTTGTTCCCTAAGTAACTGTTCCATCGAGGCCTGCAGCTCTTGTAAATCTGTGTCAGTTTCTTCAAACACACTGAAA chr4 - 94230402 67708935 67708934 67709157 26521246 26521245 26521468 223 TGTACCTGACTGCCATTCTTCATTAAGTGCACTTTCACTGCTGGG---GTTATTTTCATCTGCTTCATCCAGCTCTGTACCATTTGTCATGCATTTGATGACGTTAGCCTTTAAAGTAGATTCCTCCTCTTCACTTAATTCCTCACTAGGCTGCTCCCTAAGTAATTGTTCCATTGAGGCCCGGAGTTCCTGCAAATCTGTATCGGCGTCCCCAAACATGCTAAAA ..:......x...........:..x..x.................---..:..:.........:x....------...x.......:x:.xx::.:x.::x.::.:x:...:..:::x..:..:..:........xx....:....:...:..:...........:........:......:.x..:..:..:........:..:.:x..::......::..:... 45M3D21M6I151M 160/217 73.7% 223/94230402 0.0% 9/217 4.1% 101692712 88521843 +9605 chr4 + 190214555 169406554 169406553 169406782 229 AGAAAATCTTTTAATGCTGTTTACTAATGACATTATACTTACATGTCTTCAGAATCAGAAGGTCCTTCTTTAATGTTTTCATCTTCAATTTCATCTATTTCAAGATTGTCTTGACGA---ACATCTCCTACGGTGGGAACATCCATAAGGGTTCTGAACAGCTTTGAGAGATCTGGAAGTGAACATGTCCTTAACATCTAAAATAAAAATCAACAAATTTCTTATTAGGAGA chr4 - 94230402 67712710 67712709 67712937 26517466 26517465 26517693 228 AAGACACCTTTTAA-AATACTTGATAACCCTACTGCACTCACATATCCTCAGAATCAGAGGGTCCTTCTTTGGCTTGCTCATCTTCCGTATCATCTATTTCAAGACTGTGTTGATGCTGTACATCTGCTATGCTGGGAACATCAACTAAGGTTCTGTACAGTTTGTAAAGATCCGGGAGTGAACACGTTCTCAACATCT---GCAAAGGTAACAAAGTCTTGTGTTTGGAAA .::.x.:.......-:x.::..:x...:xx:.:.::...:....:..:...........:...........:::x.x:........x:.x...............:...x....:.x---......x...:.x..........x.:x.:.......x....:..xx.:.....:..:........:..:..:.......---::...::.x.xx..:.:.:x.:..x...:. 14M1D102M3I79M3D30M 160/225 71.1% 228/94230402 0.0% 7/225 3.1% 101693844 88520711 +3137 chr4 + 190214555 169412873 169412872 169412924 52 GAGAGGGGTGGTGGGGGGAGGGAGGGAGGAAGAGAGAGGAAGAAAGAGAGGG chr4 - 94230402 29307050 29307049 29307101 64923302 64923301 64923353 52 GGGAGGGCTGGGGGGGGGGGGCAGGGAGGAAGAGAAGGAAACAAAGGAAGAG .:.....x...x......:..x.............::.:..x....::..:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 140105823 50108732 +3039 chr4 + 190214555 169412884 169412883 169412934 51 TGGGGGGAGGGAGGGAGGAAGAGAGAGGAAGAAAGAGAGGGAAAGAGGGAG chr4 - 94230402 43294274 43294273 43294324 50936079 50936078 50936129 51 TGGGGGGTGGGGGGAAGGGAGAAAGAGGAAAGAAAAAAAAAAAAGGGGGGG .......x...:..:...:...:.......::..:.:.:::....:...:. 51M 37/51 72.5% 51/94230402 0.0% 0/51 0.0% 126118610 64095945 +8583 chr4 + 190214555 169424549 169424548 169424757 209 TTGCCTTTGGGTTGTTTGCATCAAACAGACCAGTTGAAAGTCCAATCAGCAAGGAATTCTTGTTTTTATTTTTTGGTGGTAAATGCGAGTGAGATCGAAATGCAAAGGATTCTTCTGGTGAACACTGAACTGATTGAACT--TGAGGGACTAAGTTCAAGTGTTCAGAATGAACCACCTTATGGAAAAATGGTTCCGGTTGCACAGACTTA chr4 - 94230402 67714360 67714359 67714568 26515835 26515834 26516043 209 TTACCTTTGGGTTGTTTGCATCAAACAGACCTGTAGAAAGTCCAAAAAACAATGAACTTTTCCCTTTATTTTTTGCTGGCGATATGGAACGTGAACGAGGTACAAAAGGCTCTTCTTGGGAAGACTGAGATGATAGAACTGGTGAGGCTGTAGGTACAGCTGG--GGGCTGTATTACTCTCTGGAATAACGGTTCAGGTTGCAGAGAGTCA ..:............................x..x..........xx.:...x...:.:..x::...........x...::.xxxx..::.x..x...::.:....:.::......x.x...x.....:x....x.....--.....xxx..:..x..:x..x--:.:x..x.::..::.x.....x..:.....x.......x...x.:. 140M2I21M2D46M 149/207 72.0% 209/94230402 0.0% 4/207 1.9% 101710189 88504366 +3220 chr4 + 190214555 169445857 169445856 169445897 41 TATATATATACACACACACACACACACACATGCACAAAATG chr4 - 94230402 21704674 21704673 21704714 72525689 72525688 72525729 41 TATATATATGTACACACACACACACACACGTGTATAAAATG .........::..................:..:.:...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 147741183 42473372 +3220 chr4 + 190214555 169445857 169445856 169445897 41 TATATATATACACACACACACACACACACATGCACAAAATG chr4 - 94230402 21701101 21701100 21701141 72529262 72529261 72529302 41 TATATATATGTACACACACACACACACACGTGTATAAAATG .........::..................:..:.:...... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 147744756 42469799 +8234 chr4 + 190214555 169477100 169477099 169477513 414 ATATTAATATACTACTATACATACTTTCAGTTGTAGAGAAGGATGTATCTAGTGTTAACTCATCCAGAGGAATCAC--AAGTTGAC-CTCCTGCCTCCCACTTCTTGCGATCAGATGAAACTGATTTTTCTTTTTCATGCTCTT---TGGCATCTTCATGAACATTTATCTCAAAAGTATCAGAGAGATTCTGCTTTCCTTTTTCATCTTCTTGAGCTTTAAGATTTTCATTTAATCTACGAAGTATTTCTCGCTTACTCTGAAA-----GTCACGACATTATATATTTTAATATGTA--TATCATTAAGTAAAATGATTGATAAACTTTGAA---AATTTTACTTACTGAAATAGCATTGTTGGTCTTTTGCATCTCTTCTGAAGTTTCCCGGGTATCAGTTAAACTACTGTCCTTTAAATGCAGATAG chr4 - 94230402 67717801 67717800 67718227 26512176 26512175 26512602 427 ATATCATGACAAGACAGTACTTACGGTCTGTTCCAGAGAGAGAATCTTCCATTGATAACTGAGCTAAAGGAACTACCAAATCTGATGCCCTTGATGCCCATCTTTTGCGATCTCCCAGAAGTGGATGGTTATCTTCTTGCTCTTCTTTACCATCTTCAGACCCATCTGACTCAGAGATATTTTTATCGTCCTTTCTTCCTTTCTCATCTTCCTGAGCTTTAAGATTTTGATTCAATCTTTTCAGTATCTGCCTCTTGTTCTGAAATAAGGATCAACAGATAAT-TACCTAAAACAGCAACTTTCTTAAAAGGAAAAGAAAATTAAAC--AGAACACAGCCTGACATACCTGCATTGTAAGATCTGGCTTTTTTATTTCCTCTTTAACCTCCTGGGCAGCGGTTACATTTCCATCCTTTAAATCCAAGAAG ....:.xx.:.xx..x:...x...xx..x...x:.....::..xx:x..:.x..x.....x.x.:.:.....::..--..x:...:-.:.:..x:x....::.:........xxx:::..x..:x.xx.:x.:...x.......---.:x........x:xx...:.:x....:.::...:xxx:xx:.:..x::.......:........:................x...:.....x:xx.....:.x:.x...::.......-----:...xx.x..x..-..::.x..xxx.:.--.x..x.x..:x:...x..xx:x.....--x...---.:::.x..x...:x:x..x.:.xx:.:x.x.....x:..:..:...xx.:::...:...:.x.:....x.:.x.::..........x..::x.. 76M2I8M1I57M3I118M5I13M1D14M2I27M2D4M3I94M 255/411 62.0% 427/94230402 0.0% 19/411 4.6% 101759299 88455256 +4947 chr4 + 190214555 169479397 169479396 169479555 159 ACTTACCACGCCAACTTCTTTCAAAGCTGAAGTTACAGAAATAA---CAGATCTCATCTGTTGCTTTGATGGAGAGCCACC--------------------------TGTTTCATGCTG-TCCCAAAGGTGGAGAAACATCAGAACTCTTAACTCCTTTAGCCACCAACTATAAAAAAGGATTTTATTA chr4 - 94230402 67719923 67719922 67720107 26510296 26510295 26510480 185 ACCTACCACGCCAACTTCTTTCAAAGCAGAAGTCATGGAGATGGGCTTAACTGGAAGCTGTTGCTTAGGAGGAGACACTCCAGGCTCTTGTATTCCATGCACAGGAGTGTGTCCTGCTGCTCCCACATGAAAAGGCACATTAGGATTCTTTACTCCTTTTGCTATCAGCTGTACA----GATTCAATTA ..:........................x.....:.::..:..::---:.:x.xxx.x.........x.:x.....xx.x..--------------------------...x..x.....-.....x.x.x::..:x....:..:.:....x........x..:.:..:..:..x.----....:x.... 44M3I34M26I12M1I55M4D10M 113/155 72.9% 185/94230402 0.0% 34/155 21.9% 101759474 88455081 +3092 chr4 + 190214555 169491121 169491120 169491191 71 AGGAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGATGGAGAAAGGCACAGAAGGCTT chr4 - 94230402 37322377 37322376 37322447 56907956 56907955 56908026 71 AAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGGGTGGACTT .:...:.x:..x.x:......:..............:.:.:.::::........:.:.:x.x:.x:.:... 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 132168744 58045811 +7232 chr4 + 190214555 169507032 169507031 169507161 130 CTTACATGCTCTTCCCACACTTTTTTTTCTCTCTCATAAGCCTCCTTTCTCTTTCGTTCTAGTTGTTCTTTTAGTACAGCAGCACGTGCATTTGCATGGGCCT---AAAAATAA--AAACAATTAACAAAATGAG chr4 - 94230402 67720645 67720644 67720779 26509624 26509623 26509758 135 CTTACATGTTCTTCCCAAGCTCTTTTCTCTCTTTCATATGCCTCCTTCCTCTTTCGCTCTAACTGTTCTTTCAGAACTGCAGCTCGAGCATTTGCTTGGGCCTGTAATAAGCAAGCAAGCAAGCAAAAAAAAGAG ........:........x:..:....:.....:.....x........:........:....::........:..x..x.....x..x........x.......---.x..::..--..:...x:..x....x... 103M3I8M2I19M 105/130 80.8% 135/94230402 0.0% 5/130 3.8% 101786387 88428168 +4675 chr4 + 190214555 169507712 169507711 169507802 91 TACCTTCAGTGATTCGATTTTTTTGCGCCTCATGTCAGCCTCTTCACTTCCTTCTTGTCCTTCAGAATGATTAGCTTCTTTCTACAAAATA chr4 - 94230402 67722403 67722402 67722493 26507910 26507909 26508000 91 TACCTTCTGTGCTTCTATCTTTTTGCGTTTCATTTCTGCTTCCTCACTTGACTCTTGTCCATCAGAACTGGGAGCTTCATTCTGCAAAGCA .......x...x...x..:........::....x..x..:..:......xx:........x......:x:xx......x....:....::. 91M 68/91 74.7% 91/94230402 0.0% 0/91 0.0% 101785309 88429246 +14750 chr4 + 190214555 169508211 169508210 169508908 698 CATTCAATTTCTTCAAAAAAATAGCTTTTCAACCTACCTTTTCACCACGAAGTTTGGCTTTAATCTGTTGGCGCTCATTGAAATTCTGTAGTCTTATTTGCCTCAGTCTTGCCAGATAAACCTAC--------AAGGAGGCAA---------------AAACCCC----AACAT----------------------------------------AATAATGTAAAAGCAAAGCTATTGACATTTTTACTGCTAGATT----TTTTTTAAATTTAAGGAACAGTGTTAATTTGAACACAAGAAATAAAAGTTCTGAAA--TCCGGTTAATGGAAATGTAATATTAGCTTTCAAGTGTT-------TAATTAAGAACAATTTATTTCTGAAAAGAAAGAAATACATTATAA-AATTACA------AATTTTTAATTTAATCAAAAGAAA-----------AGA------------AACTG-----------------------------AAATCATAATATTGAATAAGTTACGGGGCAAAATTATAACACAGAATGTCAGTCAAAAATATATTAACAGGTCCCTACAGACCTACAAAATCTTCAAATAATTGTTAAGAATTTAAACCATGCAAGAAAAGAAGGCAA---TAAATTCAAAA-ATGGCTA----TGTGATGGAGGTAGCGAACATGCGGGAAGCATACCTCTTCCTCTTTGTTTCTTGGCTTCCCTCCTCTTGAAGAGCTGGGCCTGCCTCCATACATAGCTGCCAGGTTTTGCAGGATTCCCTGTTTATCATTTAAT-GTACTAAGTTTAAAGAATGACTAAGGCTACATTATTATCT chr4 - 94230402 67723323 67723322 67724120 26506283 26506282 26507080 798 CAGCCAACTTCTTAAGTTATTAATTTTTTAAACTGACCTTCTCTCCACGAAGTTTTGCTTTAATCTGTTGACGCTCATTGAAGTTTTGTAGTCGTATCTGTCTTAATCTTGCCAAATATTCCTAAGGCAAAGAAAGGAAGCAATTTTTAATTGTACTGAAACCATTTGTAGCATGGCTAGCTTACAGTACTAGTCAGGATTCCACAAAAAGTCAAATGAAATGAGGGGAAAAACAACAATATTACTATTGCTATAATAACATTTAATAATTTCCAGAAGAACTCTCATC-----CAATAAAAATAAAA---CTGAAACTTACGTTCCTTGG--------TATTAAGCTACTATTGTACTTGACATAATTAAGGATCAG--------GAATGGTTACACATACGTTATAACAGTTACATCATACAGATATGTATGCAATTTCAAGAAACTTTTCTCGGCAGACATTTTTTCCATAACTGTTGTAGACAACAGtttttatgattatttaaaataataataatttaaaaattaCACACCCACATT-----------------CCAGAAATAAATTA----TTTCCTAGGAATTTATGAAGTCCTTTCATTGT-GTTACAATGATGAACCATGCAGGGAAAAAAGGCACAGTGAAGCTCAAAACAGGGCTACTTTTGTGATGGAAGTGGCAAACATGCGGCAAGCATACCTCTTCTTCCTTGTTTCTGGATTTCCTTCCTCTTGCAGACATGGGCCTGCCTCCATAGATATCTGCCACGTTTTGCAGTGTACCCTGTTTGCCATTTAATGGTATCAAATTTAA--AATGGCTTGGGCAGTAAAATTATCT ..x:...:.....x.:xx.xxx.x:....x...:x.....:..x...........x..............:...........:..:.......x...:..:..:.:........:...xx....x--------.....:....---------------.....x:----.:...----------------------------------------...:.x:.:.::.x...:x:.x::.:...x:..:.....x.x.----...xx...x..:x..:.:x.x.x.:.x:-----..xx.:........---......--.x..x.:xx...--------.....:x:.x.x.x...x-------........:.:x.x--------...x:.xx.x.x....:......-.:.....------.:x.x.xx..x:...:xx......-----------...------------.....-----------------------------....x......x.xx.x..:....:x:x.x.x...-----------------:..:.....x....----x.:....x::.::..::..:..:.:xx..x:.-....x:.xxx.:.........:.:...:......x---x..::......-.x.....----.........:..:..:.........x..............:..:........x.::....:........x...xx................x...x......x.........x:.x........::........-...::..:.....--....:..x:...x::.xx....... 125M8I10M15I7M4I5M40I43M4I28M5D14M3D6M2I12M8D18M7I14M8D23M1I7M6I24M11I3M12I5M29I35M17D14M4D32M1D35M3I11M1I7M4I134M1I13M2D25M 470/650 72.3% 798/94230402 0.0% 196/650 30.2% 101784888 88429667 +7947 chr4 + 190214555 169537766 169537765 169537988 223 ATACTAAT----ACATTCAAAAT---CTCAGAAACAA------ACAAAA-------TTCATACCATATGTCCTTCGGCTCGAGCTTTATTCTGCATAGCTTCCCGTTTTCGCTGCAGGAACTCTTCTACTTGTTTAGCTCTTTCTACAGCTAGCTGCCCTTTTTGCC----TAATTTGGACAAATCACAAAGTC--AGCCATCCTGAACAGAAAATATTCTAAAAAGTTAAAAATTACATTTATCCTAA chr4 - 94230402 67726795 67726794 67727035 26503368 26503367 26503608 241 ATACTAATTTAAAGATTCATAAAGCATTCTGAAACAATAATACACAAAGACTGCATTTCATACCATGTGTCCCTCAGCACGAGCTTTGTTTTGCATGGCTTCCCTCTTTCGTTGCCAGAATTCTTCAACTTGCTTTGCTCTTTCTGCAGGTAGCCATCCTTTCTGCCTGAATAATTGTAACACATAGCAAGCTCTAAGC---TTTGGAAATACAGTATTCATACAACCTA-----TGCATTTATCCTAA ........----.x.....x..x---:..x.......------.....:-------..........:.....:..:..x........:..:.....:.......x:.....:...x:...:.....x.....:..x.........:...x....:::.....:....----.....xx:...x..x:...:x..--...---::..:.x.x.x.:.....xx.x..x:..-----.:............ 8M4I11M3I11M6I6M7I111M4I23M2I3M3D28M5D14M 166/215 77.2% 241/94230402 0.0% 34/215 15.8% 101810971 88403584 +21020 chr4 + 190214555 169555674 169555673 169556139 466 ACAAAATT---ACACACATGGATGAATTCATGGATCATCACAGTCCAACCTGTTTGCATTGGCTTGTTTAGACACCGCCTTCAATCTTTTCAAAGTTTTTCTAATATCATCAGCATCAGGAAAATGGTGATGACCTGCAGCCCCATAAGGAAATCCTGGACGAACTCCAGGCAGAATTCCTCTGTAGATAAATATGCACAGTGACTTTCATTACTATC-TCAGAAGCAAAGCATAAGCAACTTC-TGCAGAACATAGCCATACCTTTCTGGAAGACCTCGACCATATATTTCTCTTTTCCATTTAGCTTCATTATCTTCTGCT-CTTTG--------TTGCTGCATTTGGTCAAAAATGGCATGGTAATGTTCATACTGTCCTCGAGAAGAAAAAGATGATGGAGCTATAGTCCCTCCACTGCCCAGAAAAGGAGCCTAGGGATTAAACAAAG--------AGCTCTCACATGTTTATCTTATAAGGC chr4 - 94230402 67730692 67730691 67731179 26499224 26499223 26499711 488 ACAAAATTCTAACATGTAGGGACAGACTTATGGATTATTGTACTCCAACCTGTTTGCACTGGCTTGTTTAGACACCTCCTTCAACCTTTTCACTTTTTTCCTAATTGCATCAGCATCAGGTAAATGGTGATGACCTGCAGGCCCCTTAGGAACTCCTGGACGTACTCCAGGTGGAATTCCTCTGTAGATAAATATGTACAGTAACTTTCATTACTTTCATCTGAAGCAGACCACATACAACTTCACATGGAAGGTAGCCATACCTCTCAACAGCTTCTTGGCCTTGTACCTCCGCCCTCCATTTGGCTTGCCTCTCTTTAGTTACTTTGAAGGTTTCCTTTTGCATCTGGTCAAAAATAGCATGATAGTGCTCATACTGTCCTCTGAAAGAGGCAGGAAAAGGACCAACACCACCTCCACCGCCATAATATGGTGCCTGAAAATCAGAAGAGGTAGGCTGAAAATCTCAAATACTGCTTTTAACAAGC ........---...:::.x...:::.:.:......:..:::.x...............:.................x.......:.......xxx....:.....xx.............x...................x...x.x.....x.........x........::.......................:.....:............x..-..x......:.x..:.x:.......-::::...x:...........:..x:x.:xx:..:.:..x.:..::..:x:::.......:....xx:.x....:x.:.-.....--------:.x:.....:...........:.....:..:..:.............x::....::x..:x:.x...x.x.:.x:x.......:...xx:.x.x..x....::::..:.:.x:.:.--------.:x.....x..::.xx.:...xx.:.. 8M3I207M1I25M1I78M1I5M8I116M8I27M 342/466 73.4% 488/94230402 0.0% 22/466 4.7% 101824982 88389573 +16598 chr4 + 190214555 169561473 169561472 169562227 755 TGCCTACCTTTACTTCACCACTTCCACCAGCACTTAGCACATTTCTCCATCCTTGTTCCCTGGCCCTATTTATTCTTTCCAACTTTGGGGAAAAGA--AATAAACAAAACACCATTTCAAGTATTTAATATAAAATACACGTAAT-ACATTTAGCAATAAACTGAAAATCAGTGTATTCCTTAAGAAAAAAGTATATTTAATAGATTATCCTCTTACCCTTTCCTTTTCTTGCCTTTTCATTTGTTCAGCCTTCATTAAACTAAT---------------AATCTGTAACAATTTTA----------AAGACAAGCTTCTTACAACTCTTGAACCTATTATCACTTAAC--AACTTGCCAAAGGTAGAAAAACAAGAGCAAAAAA--------------------CTACCTGATCCTTTTGTTTCTTTTCTTTTTCAATAAATTCCAGCCTTCTCTTTCTTGCTGCTTCCTTAAATAAAAAAAAGAACATTTTAATCCATAATAATTCC--------TGTTTTTTCTAGTTTC-ATCAGGA-AAGTTAGTACACCAATGGCAGAGGTATGTTCAATGAGGTTTTTTTTTTAAAAAAAAAAAGAAGTTATAGGTATTCGTTTGAAAGAAATA-----AGGAAAGGTTTGGAGGCTTTATAGTAAGATTTTGT--TTCTTTTTTAAAATTATGTTTGCAAAGCTTTAAAATAACCAGACAGATGTCTTTATACCTCAGATATTTTCCTCCTTTCTTCTCCAGTATTCACTCTCTTCTCTGGAGTTTGATGGGCCTGGACAAAAAGTAAAACTACAAATTAAATA chr4 - 94230402 67733881 67733880 67734630 26495773 26495772 26496522 750 TGCCAACCTTAACATCACCACTTCCACCTGAACCAAGCACATTCCTCCATCCTTGCTCCCTGGCTCTGTTTATTCGTTCCATCTGAAGGGAAAAAAACAATAAAGGAAA--------------------ATATAATTCAAGGAATCACTTTAAGTAAAAAAATTAAGAT-----------TCACTATTAACACATTTTAAACATATT------TTACCCTTTCTTTTTCCAATCTTCTCATTTCCTCTGCCTTCAGTAAACTGATCTGCAACGCATAAGGATTAAGTAACATATTTAGTAACTGGGGAAACTGAACTACTGCCATCTCCTAGGCAACACAACATGTCACTAGAATTACTATGGGTGTTTAAAAAAAAATTAAAAAGGGCGTCCCAAGTATCTTGTCTACCTGATCTCTCTGGCGTTTTTCTTTTTCAGGCAATTCTAACCTTTTCTTTTTTGAAGGTTCCT------GAAAAATAAGCATATAATTTGGTATTTATTGCTCAGCCATTGTTCTGCGAAGCATCTGTCAAGATTGGTTAGTATTCCACTTGCTG-GTTATGTCCA---------------TGAAGATAAAAATCTTTGCTAGATTATGACTGGAAAAAAAGATAAGGAGGAAAGGTTCGAAAGTTTT--------ATTTTGCCATTCTTGCTTTGGACTTTGCTT----AGATTAAAAATTAGCATG-AAATTTCATGATACCTCAAACATTTTCCTCCTTTCTTCTCCTGGAATAATTTTCTTCTTTGGAGTTGGAAAGGCCTAGATAAAAGGTGAAACTTAAAATTAGATA ....x.....x..x..............x.x..:x........:...........:........:..:.......x.....x..xx:.......:.--......x:...--------------------...x...x..x.x...-..x..x..:..x...x.x..:..-----------.:.xx.xx..x::..x..x..:.x...------..........:.....:x::...:......x:..x.......x......:..---------------.x.xx......xx....----------..:x::.:..x..xx..x...:.:::.xxxx:.x..:x.x..--:.x..:.:.x:...:xxx...x..:.::x.....--------------------..........::.:..x:x:............:xx.....:.:....:.....:...xx.x.....------:.....x:.:...x.x.x.:x:..x.x...x.--------....:.x:xx..:x..-:...:..-x:.......:x...x.x..x.-.x.....:..---------------.:..:.x.....xxxx.xx...:.xx.x::.x....:...x.-----..........:.:.:.:...--------......:--.....x:..x::.:.x..:..----..x..x.....x.x..x:-.:..x..x.x........:.:....................x.x.x.x.:.:......:.......x..x:.....:..:....:..:.....xx......:... 96M2I11M20D16M1I23M11D27M6D52M15I17M10I42M2I34M20I66M6D32M8I16M1I7M1I21M1D10M15D42M5I20M8D7M2I21M4D18M1D105M 480/683 70.3% 750/94230402 0.0% 139/683 20.4% 101827592 88386963 +7266 chr4 + 190214555 169576913 169576912 169577095 183 GTAACATGATCATACCTGTTTATGTTTTTGCAGTGGTTTCTTTTCGTGTAATTTTTTA------TCTCCATATTTCTTATATGCTAAAGGTATTCCATATTTAGCGGCAGGCTTTGTAATTTTCTGAGCAGGCATAACAGAAATCGAGTTTTGTCCTGAAGCTGGTCTTTTAGCTAGATGAAAAGATAC chr4 - 94230402 67736435 67736434 67736621 26493782 26493781 26493968 187 GTAACTTAGT--TACCTGCCTAAGTTTAATCAATGACTTTTTCTCATGAAGCTTTTTGGGTGCGTCATAACACTTCTTCATCGCTAAAGGCACTCCGTATTTTGCAGCAGGTTTGGTAATTTTCTGCACTGGTGCAATTGAAGCCGAGATATGTCCTTGAGCTGGTCTTTTAGCTTAACAAGAAGAGAC .....x.::.--......::..x....xxx..:..::..:..:..:..x.::.....:------..x:x.:.:.....xxx:........:.:...:.....x..:.....:..x...........x:.x..:::..:x...::....x.x......x:................x:.::.:....x.. 10M2D46M6I125M 126/181 69.6% 187/94230402 0.0% 8/181 4.4% 101840478 88374077 +4628 chr4 + 190214555 169580823 169580822 169581031 209 CATATCAGAT-TTCATTTACCTGGTATAGGCTGTGATCCAAACTTCGAAAATGTTTTTAGACAAAATTCTTCTGCAATAAGCTGAGATTGAAAGAGAA---AAAAATTAGAAAAGATGTTACATTTTCAAAATAAAAAACCTACCCATTAATTATAATACATCTTCCCCTTTTTCAGTAGTAATTATGCTGCCAAATAAACTGTACTAAAACC chr4 - 94230402 67737715 67737714 67737918 26492485 26492484 26492688 204 CATTTCACATATTTACTTACCTGGTCCAGCATGTGGTCCAAACTTGTGAAACACTTTGTGACTGAATTCTTCTGCAATAAGCTA-----GAAAAAGAGTTCAACTGTTAGTCAAGAATATTTATGTTCAAAGCTAGAAAGA-ACTCATTTTCAGCAAAGTCTGTACACCTCTTTCAGTTAAATTTCTAATTACTAGTA---TTTACTAAAACC ...x...x..-..:.:.........x:..xx....:.........xx:...:::...xx...x:...................:-----....:...:---..xx:....xx....xxx.x:..x......::x.:...xx-..:....xx:x::..x::x.x.x.x...:.......x:x.x..x.:x.xx.x.:..---.x.......... 10M1I73M5D9M3I40M1D56M3D12M 134/200 67.0% 204/94230402 0.0% 13/200 6.5% 101843108 88371447 +15316 chr4 + 190214555 169585329 169585328 169585567 239 TTAAAGGAAAAAGAACT---TACCTGAGGAGAGAGAAACTTTTCAATGCGTTTGGCTATAAAACCTTTCTCCAATATGGAGTTGACTGATGGTCTATCCCTAGGATTTCTTTTAAATAACTGAGACACCAAACTGCGGAGATCATAGGAATAATGCAAAGACACAGGTGGAAAAGATCCAGATATTATCTTCAGTACCAGGTTTTTCATACTGCCAGCTTCAAACTAAATTCCAGAAAATAA chr4 - 94230402 67740386 67740385 67740627 26489776 26489775 26490017 242 TTAAATGAAAACCAACTCCATACCTGCGGTGTGAGAAATTTTTCAACCCGTTTGGCTATGAAATTTTTCTCCAATATGGAGTTCACTGATGGTCTATCCCTAGGATTCCTTTTAAATAACTGTGACAGTAGATTACGTAGGTCATAGGAATAATGCACAGAAACAGGAGGGAAAGATCCAGAGATTATCTTCAGTACCAAGTTCTTCATGTTACCAGCTTCAAACTGTATTATGTAAGAAAA .....x.....xx....---......x..x.x......:.......:x...........:...::..................x.......................:..............x....x:.:.:.:..x..:................x...x.....x..:...........x................:...:.....::.:.............:x...x::x..:.x.. 17M3I222M 199/239 83.3% 242/94230402 0.0% 3/239 1.3% 101844943 88369612 +4788 chr4 + 190214555 169587532 169587531 169587628 97 GAAAGTATTTCA---------GAAACTTCTACTTACAGCATGTTTAAGTGTACACAGCTCATAAAGGACACACCCCAGAGCCCAAATGTCACTGGAGAAGATAAAA chr4 - 94230402 67741775 67741774 67741880 26488523 26488522 26488628 106 GGAAGTCTTTCAAAGAAGCAAGAAGGTTCTACTCACTGCATGCTTAAGTGTGCACATTTCATAGAGAACGCAACCAAGGGCCCAGATATCACTAAAACAGAAAGAA .:....x.....---------...:x.......:..x.....:........:....x:.....:..:..:..x..x..:.....:..:.....::.:x...x.:.. 12M9I85M 73/97 75.3% 106/94230402 0.0% 9/97 9.3% 101845757 88368798 +7365 chr4 + 190214555 169588614 169588613 169588752 139 CAAATACATCACATAATGAATATCATTTTAAATACCTTTTATTATTGTAAGGTTTGTTTTCACAGATTTCAGGTGACAAGTAGTATGGGGTCCCTATGCAAGTTCGAGCCAGCTCTACAGTACTAGAAGAAAAATAAAA chr4 - 94230402 67742900 67742899 67743034 26487369 26487368 26487503 135 CAAAAATATTAAATAAA----ATGGTTACTAGTACCTTTTATTGTTGTAAGGCCTGTTCTGGCATATTTCAGGTGATAAATAGTATGGTGTTCCTATGCAAGTGCGAGCCAATTCCACAGTACTAAGAAAAAAGTAAGA ....x.:..:.x....x----..x:..x:x.:...........:........::....:.x:..x...........:..:........x..:...........x.......::..:.........::.:....:...:. 17M4D118M 104/135 77.0% 135/94230402 0.0% 4/135 3.0% 101845714 88368841 +5567 chr4 + 190214555 169589443 169589442 169589516 74 TTACCTATTAAGAACTCTAGCAATTCCAAAATCTCCAAGTTGTACTGTTCCATCTTTAGTTAAAAATATGTTCT chr4 - 94230402 67743126 67743125 67743199 26487204 26487203 26487277 74 TTACCTGTTCAGAACTCTCGCGATTCCAAAATCTCCCAGCTGTATTGTTCCATCTTTGGTTAAAAATATATTCT ......:..x........x..:..............x..:....:............:...........:.... 74M 65/74 87.8% 74/94230402 0.0% 0/74 0.0% 101846317 88368238 +6728 chr4 + 190214555 169590720 169590719 169590827 108 ACATACCTGAGATTTAATGTCTCGATGAAGAATTTTTCTATCATGTACATGTTTCAGGGCCAAACATATCTGTACAAACCAGTCCAAAATCTA-GGAAGAAAAATCAGA chr4 - 94230402 67743634 67743633 67743742 26486661 26486660 26486769 109 ACATACCTGTGACTTTATGTCGCGATGTAAGATTTTTCTATCATGTATATGTTTCAGTGCCAAACAGATCTGTACAAACCAATCAAGAATCTATGTATGAAAAAGCAAA .........x..:..x.....x.....x.::................:.........x........x..............:..x.:......-.x.x......x..:. 93M1I15M 91/108 84.3% 109/94230402 0.0% 1/108 0.9% 101847086 88367469 +8338 chr4 + 190214555 169599060 169599059 169599218 159 AATAATAGAGTAAGAGTCAATTTCCTAAATGCAAACTTACCTGATCCTCTTGAAACAAAACGCCTTTCTGAGCATTTATTCGCTTAAACAGATCCCCTCCCTCACAGTAATCCATTACTATGTAGAGAGAGCCATTTTCTACAAAATA----TAAACATTACA chr4 - 94230402 67745022 67745021 67745172 26485231 26485230 26485381 151 AATAGTAAGGCAG----CAATTTGCTGAAT--------ACCTGATCCTCAGAGAACAGGACTCCTTTCTGGGCATTTATTTTTTTGAACAGATCTCCTCCTTCACAGTAATCCATCACTATGTAGAGACAACCATTTTCTGCAAAATAAAACTAAATATTACA ....:..::.:.:----......x..:...--------...........xx::....::..x........:.........:x:..:........:.....:..............:............x.:.........:.......----....:...... 13M4D13M8D110M4I11M 121/147 82.3% 151/94230402 0.0% 16/147 10.9% 101854038 88360517 +8934 chr4 + 190214555 169601997 169601996 169602189 193 ATTTATCTGACCTTCAAATGATTCTCTATACTGGACAATATTTGGATGCTTCATGTTTGCCAATACTGCAACTTCTCTCCTTGATTCTTCTCTTTCTTTACTGGACATCTTAAATGGGAGGAAAAAGAAAATAGTAA---ATGAAACCATTAATAAACAACCTAAAAGTCCATCAATAGGTGAGTGGTTAA-AACAT chr4 - 94230402 67746993 67746992 67747168 26483235 26483234 26483410 176 ATTAATCTTACCTTCAAACGACTCCCTATACAGGACAATATTTGGATGTTTCATGTTGGCCAGTACAGCAACTTCTCTCCTTGATTCTTCTCTCTCTTTATTTGACATCTTC---------AAAAGGAAAATAATGATTTTTGAAAATAGGAATA-------TAAAAA-----CAATAGATCAGTAATTAATAACAT ...x....x.........:..:..:......x................:........x....:...x..........................:......:.x........x---------....:.......:.:.---x.....x:.xx....-------.....:-----......:.x...::....-..... 112M9D16M3I15M7D6M5D18M1I5M 145/172 84.3% 176/94230402 0.0% 25/172 14.5% 101855004 88359551 +8582 chr4 + 190214555 169602496 169602495 169602691 196 AACTAAAAATAT-ACTTACTCTTGAGATGTTAATTTCCTTGATAACATACTGTCTGCCATCTTCTGTAGATTTAACAAGAATGGCTTTTCCAAATGAACCTTCTCCAATCTTCTGTAGTCTAACATACTTCTCCATGATTCTTTTTCTAAGGCATCTTTACAGATATGCTAGACATTTAAAAAACTAACAAAAAAGA chr4 - 94230402 67747157 67747156 67747352 26483051 26483050 26483246 196 AATTAATAACATCACTCACCTTAGATATGTTAATTTCTTTAATAACATACTGCTGGCTATTTTCTTTATCTTTAACAAGAAATGCTTTCCCAAAGGATCCTTCTCCAATTTTTTGCACTTTAATGTATTTATCCATAGTTTTCTTCTTAAGGCAT-TCTCCTCAAGCACTAAGCAAAAAAAAAAAAAACACAAAAGA ..:...x..:..-...:..::.x..x...........:..:...........::x..:..:....x..xx...........xx.....:.....x..x...........:..:..:.x.:...::..:..x.....::..:.:..::........-.:.x.xx.x:::...::..xxx......xx....x...... 12M1I142M1D41M 141/195 72.3% 196/94230402 0.0% 2/195 1.0% 101855339 88359216 +3558 chr4 + 190214555 169624209 169624208 169624287 79 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCACGCGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..:...........:.x...x..x.x........:.x:.........:.:....--.::..:.... 67M2D10M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 151427083 38787472 +13630 chr4 + 190214555 169635882 169635881 169636095 214 AAATGTTAAAACTACTTTTTCCCCCCCACAGATAATCAGACAGCTAAATGGAGTCTGAGCAGCTGTTCCATAGAGGCTACTATAGAAACAGCTACAACAGTATAACAAGTGCAAGTAGTGATGAGGAACTTTTAGATGGAGCAGGTGTTATTATGGACTTTCAAACATCTGAAGATGACAATTTATTAGATGGTGACACTGCAGTTGGTAAGTT chr4 - 94230402 67763439 67763438 67763647 26466756 26466755 26466964 209 AAATATAAAA-----TGTTTTCTTTATGTAGGTTATAAAGCAGCTAAATGGAGTCTGAGCAGCTGTTTCATAGAGGCTACTATCGAAACAGTTACAACAGTATAACCAGTGCAAGCAGCGATGAGGAGCTTTTAGATGGAGCGGGTGTAATTATGGACTTTCAGACCTCTGAAGATGACAATCTCTTGGATGGTGATGCATCAATCGGTAAGTT ....:.x...-----.x...:.:::x:::..:.x..x.::...........................:...............x.......:..............x........:..:........:..............:.....x..............:..x...............:.x..:........::.xx..:.:........ 10M5D199M 173/209 82.8% 209/94230402 0.0% 5/209 2.4% 101872443 88342112 +3122 chr4 + 190214555 169637570 169637569 169637634 65 AAAAACCAAACAAACACCACCACCACCAACAACAACAACAAAAACTTTTTCTTTTCCTTTATTCT chr4 - 94230402 70344494 70344493 70344556 23885847 23885846 23885909 63 AAAAAACACAAAAAAGCC--CACCACCAACAATAACAACAAAAACTTTGTATTTTTTTATAGTTT .....x..x.x...x:..--............:...............x.x....::.x..x.:. 18M2D45M 50/63 79.4% 63/94230402 0.0% 2/63 3.2% 99293076 90921479 +5590 chr4 + 190214555 169660369 169660368 169660451 83 CATGGATGCTTCTTCCGACCCTTATTTGCCTTATGACGGGGGAGGAGACAGTATTCCCCTGAGGGAATTACATAAAAGAGGTA chr4 - 94230402 67775076 67775075 67775158 26455245 26455244 26455327 83 CATGGATGCCTCTTCCGACCCGTACTTGCCCTACGATGGCGGAGGAGACGGCATTCCGCTCCGGGAGCTGCATAAAAGAGGTA .........:...........x..:.....:..:..:..x.........:.:.....x..xx....::.:............. 83M 68/83 81.9% 83/94230402 0.0% 0/83 0.0% 101885293 88329262 +3073 chr4 + 190214555 169668036 169668035 169668083 48 GCCAGACATTTTTTTTTTTTTTTTTTTTTTTGCTGTCTTTGTCATATT chr4 - 94230402 57540535 57540534 57540582 36689821 36689820 36689868 48 GCAAGACATTTCTTTCTTTTTTTTTTTTTCCCCTGTCTTTACCAAATT ..x........:...:.............::x........::..x... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 112127501 78087054 +13773 chr4 + 190214555 169680028 169680027 169680236 209 TCTTTCCTTTTCTCTTCTGTAGGAACTCATTATACAATGACAAATGGAGGCAGCATTAACAGTTCTACACATTTACTGGATCTTTTGGATGAACCAATTCCAGGTGTTGGTACATATGATGATTTCCATACTATTGATTGGGTGCGAGAAAAATGTAAAGACAGAGAAAGGCATAGACGGGTAAGTGTTTTTAGTAAAAATTTTTAAAA chr4 - 94230402 67787585 67787584 67787793 26442610 26442609 26442818 209 TTTTGTCTTTCCTCTGCCACAGGAACTCATTATACAATGACAAATGGAGGAAGCATCAACAGTTCAACACATTTACTGGATCTTCTGGATGAACCAATTCCTGGAGTAGGAACGTACGATGACTTCCATACCATTGACTGGGTTCGAGAGAAGTGCAAAGACAGAGAAAGGCATAGACGGGTACATGAGATCAATAACAATACTTGGAA .:..x:....:....x.:::..............................x.....:........x..................:................x..x..x..x..:..:.....:........:.....:.....x.....:..:..:...........................x:..xxx.:.:...x...x:..::.. 209M 172/209 82.3% 209/94230402 0.0% 0/209 0.0% 101892443 88322112 +3004 chr4 + 190214555 169684974 169684973 169685026 53 AATTTTTTTTTTTTTTTTTTTTTTTAAGAGACTGGGTCTTGCTATGTTACTCA chr4 - 94230402 4082173 4082172 4082225 90148178 90148177 90148230 53 AATTTGCCTTTTTTTTTTTTTTTTTAAGGGATTGTGTCTTCGTATTTTAGCCA .....x::....................:..:..x.....xx...x...x:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 165602801 24611754 +9239 chr4 + 190214555 169687620 169687619 169687761 142 TAGTTGGAAAAATGAA----GCATAAACATTTCTAATTTCAGATCAACAGCAAAAAGAAAGAATCAGCATGGGAAATGACAAAAAGTTTGTATGATGCGTGGTCAGGATGGCTAGTAGTAACACTAACAGGATTGGCATCAGGTAA chr4 - 94230402 67789480 67789479 67789625 26440778 26440777 26440923 146 TATTGGGAAAAAACAACTATGCGTAATGATTTCTCTCTGCAGATTAACAGCAAGAAGAAAGAATCAGCATGGGAGATGACAAAAAGTTTGTATGATGCATGGTCAGGATGGCTCGTAGTCACGCTAACTGGCTTGGCATCAGGTAA ..x.x.......xx..----..:...xx......xx:.x.....:........:....................:.......................:..............x.....x..:.....x..x.............. 16M4I126M 122/142 85.9% 146/94230402 0.0% 4/142 2.8% 101898140 88316415 +3988 chr4 + 190214555 169688162 169688161 169688269 108 TATCACCATTTTGCAGATGAGGAGACTGAAGCAGAAGAAAAGTAACTTAGTTTGACTGAGGTCATACAGTTTAGTAAATGGCTAAACCAGGATTTGAATTAAAGCCTT chr4 - 94230402 80987865 80987864 80987970 13242433 13242432 13242538 106 TATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTC--ACAGGTGAGTCAGTGGCAGAGCTGGGAACAGACCTCAAGTCTT ....x.:.....:......:...:.....:...xx...:.:.:x..x.:::...x.::.....--....x.x...x.:....x:.:.::...x:x..x:.x...:... 63M2D43M 71/106 67.0% 106/94230402 0.0% 2/106 1.9% 88700297 NA +14645 chr4 + 190214555 169689032 169689031 169689246 215 TGTTTTTATA---GGGGCACTGGCCGGATTAATAGACATTGCTGCCGATTGGATGACTGACCTAAAGGAGGGCATTTGCCTTAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTGGGGATCTAATGAAACAACATTTGAAGAGAGGGATAAATGTCCACAGTGGAAAACATGGGCAGAATTAATCATAGGTCAAGCAGAGGTAAGT-----CTTGCTTTGT chr4 - 94230402 67792073 67792072 67792295 26438108 26438107 26438330 223 TGTTTCTACAACAGGGGCGCTGGCAGGATTAATTGACATTGCTGCTGACTGGATGACTGACTTAAAGGAAGGCATTTGCCTTAGTGCTTTGTGGTTTAACCATGAACAGTGTTGCTGGGGTTCAAATGAGACCACGTTTGAAGAGAGAGATAAATGTCCACAGTGGAAAACTTGGGCAGAGCTAATAATTGGGCAAGCAGAAGTAAGTATATACTTGTTCTGT .....:..:.---.....:.....x........x...........:..:............:.......:.................x.......x:.....:........:..:.....x..x.....:..x..:...........:.......................x........::....x..x..x........:......-----....:.:... 10M3I195M5I10M 185/215 86.0% 223/94230402 0.0% 8/215 3.7% 101896959 88317596 +3194 chr4 + 190214555 169690116 169690115 169690178 63 TTACTGAAGTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTGGCCGGTGGGATGGAGTCTCAC chr4 - 94230402 56886674 56886673 56886736 37343667 37343666 37343729 63 TTAATATAGTCTTTCACCCTTCCTTTTTTTTTTTTTTTTTTGGCAAGTGAAATGAAGTTATAC ...x.:x...:.:.:x:.:...:.....................x:...::...:...:x:.. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 112803442 77411113 +9992 chr4 + 190214555 169690518 169690517 169690671 154 TTTTCTTTTTAGGGTCCTGGTTCTTATATCATGAACTACATAATGTACATCTTCTGGGCCTTGAGTTTTGCCTTTCTTGCAGTTTCCCTGGTAAAGGTATTTGCTCCATATGCCTGTGGCTCTGGAATTCCAGAGGTAAG--CCAAGTAATATTTA chr4 - 94230402 67792919 67792918 67793074 26437329 26437328 26437484 156 TTTTGTCTTTAGGGTCCGGGTTCATACATAATGAACTACATAATGTACATTTTCTGGGCTTTGAGCTTTGCCTTCTTAGCAGTTTGTCTGGTGAAGGTGTTTGCTCCATATGCCTGTGGCTCGGGGATACCTGAGGTGAGCTCTAATTAGTAATTA ....x.:..........x.....x..:..x....................:........:.....:........::.x.......x:.....:.....:.......................x..:..x..x.....:..--.:..x..:..x... 140M2I14M 129/154 83.8% 156/94230402 0.0% 2/154 1.3% 101897599 88316956 +17575 chr4 + 190214555 169692103 169692102 169692388 286 TTGCCTTGTAGATTAAAACTATTTTAAGTGGATTCATCATCAGAGGTTACTTGGGAAAATGGACTTTAATGATTAAAACCATCACATTAGTCCTGGCTGTGGCATCAGGTTTGAGTTTAGGAAAAGAAGGTCCCCTGGTACATGTTGCCTGTTGCTGCGGAAATATCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACGAAGCTAAAAAAAGGGAGGTAAGTGTCTTTTGTAGTTAATTTGACTGAAAAATATATATTATATA-GTATTTATTTAAGTAAAGAAT chr4 - 94230402 67795085 67795084 67795362 26435041 26435040 26435318 278 TTTTCTTCCAGATAAAAACTATTTTGAGTGGCTTCATCATCAGAGGTTACCTGGGGAAGTGGACTTTGATGATAAAAACCATCACTTTAGTCTTGGCTGTAGCATCTGGTTTGAGTTTAGGAAAAGAAGGTCCATTGGTACATGTTGCCTGCTGCTGTGGGAATATTTTTTCCTACCTCTTTCCAAAGTACAGCACAAATGAAGCTAAAAAACGAGAGGTAAGT-TCTTGTAAAATTAGTTT---TAGAATGTATTGATTATCCATGTGCTT-----AGTAAAAAAT ..x:...x:....x...........:.....x..................:....:..:........:.....x...........x......:.......:.....x..........................x:................:.....:..:.....:.......................:........:............x.:.........-....x.:x.:...:...---.::..x:...xx.....x:.-..::..-----......:... 224M1D17M3D20M1I6M5D10M 235/277 84.8% 278/94230402 0.0% 10/277 3.6% 101897018 88317537 +3660 chr4 + 190214555 169694277 169694276 169694358 82 CCTTAAGAGCTAAGTAAT-ATTATCACGTTTCCATTTTA-----GAGAAAACTGAGGCACATATAGGTTAGGTTATCTACCCATAGCC chr4 - 94230402 10729177 10729176 10729262 83501141 83501140 83501226 86 CCCTGTGAGGTAGGTAATTACTATCA--GCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.:x...x..:.....-.:.....--x:.........-----.:.................:......:..x..:.:....x..:. 18M1I7M2D11M5I44M 64/80 80.0% 86/94230402 0.0% 8/80 10.0% 158965100 31249455 +6828 chr4 + 190214555 169695595 169695594 169695705 111 CCATATCCTCTTTCTAGGTGCTATCAGCTGCCTCAGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTTTTTAGCCTGGAAGAGGTAGGTGAAAAGA chr4 - 94230402 67795716 67795715 67795826 26434577 26434576 26434687 111 CCATGGTTCTTTTCCAGGTATTGTCAGCTGCTTCAGCAGCGGGAGTGTCTGTAGCCTTTGGTGCCCCAATTGGTGGAGTCCTTTTCAGTCTGGAGGAGGTATGTCAAGAGA ....:x::::....:....::.:........:.....x..:..:..x........:........x........x.....:.....:..:.....:......x..x..:... 111M 86/111 77.5% 111/94230402 0.0% 0/111 0.0% 101899879 88314676 +40415 chr4 + 190214555 169697157 169697156 169697747 591 ATTAATTTTTCTTTTCCTTTTCTTTTTTTTAGGTTAGCTATTATTTTCCTCTCAAAACTTTATGGAGATCATTTTTTGCTGCTTTAGTGGCTGCATTTGTTTTGAGGTCCATCAATCCATTTGGTAACAGCCGTCTGGTCCTTTTTTATGTGGAGTATCATACACCATGGTACCTTTTTGAACTGTTTCCTTTTATTCTTCTAGGGGTATTTGGAGGGCTTTGGGGAGCCTTTTTCATTAGGGCAAATATTGCCTGGTGTCGTCGACGCAAGTCCACGAAATTTGGAAAGTATCCCGTTCTGGAAGTCATTATTGTTGCAGCCATTACTGCTGTGATAGCCTTCCCTAATCCATACACTAGGCTAAACACCAGTGAACTGATCAAAGAGCTTTTTACAGACTGTGGTCCCCTGGAATCCTCTTCTCTTTGTGACTACAGAAATGACATGAATGCCAGTAAAATTGTCGATGACATTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAGCTATATGGCAGTTATGCCTGGCACTCATATTTAAAATCATAATGACAGTATTCACTTTTGGCATCAAGGTAAGTGCTAATG chr4 - 94230402 67796355 67796354 67796944 26433459 26433458 26434048 590 ACTAATAATTCTCATGTATTTCTTTTTGC-AGGTCAGTTACTATTTCCCACTGAAAACTTTATGGAGATCATTTTTTGCTGCTTTAGTAGCTGCATTTGTTTTAAGGTCCATCAATCCTTTTGGTAATAGCCGCCTAGTTCTTTTTTATGTGGAATATCACACTCCTTGGTACCTTTTTGAACTGCTACCTTTTATTCTTTTGGGAGTATTTGGTGGGCTCTGGGGAGCATTTTTCATCCGAGCAAACATTGCATGGTGTCGTCGACGCAAATCTACAAAGTTTGGGAAGTACCCTGTCCTGGAGGTCATCATTGTTGCAGCAATAACAGCTGTCATCGCATTTCCTAATCCATATACGAGGCTAAACACTAGTGAGCTTATTAAAGAGCTCTTCACAGACTGTGGGCCGTTAGAGTCCTCCTCCCTCTGTGACTACAGAAATGATATGAATGCAAGCAAAATAGTAGATGATATTCCTGACCGTCCAGCAGGCACTGGAGTCTATTCAGCTATATGGCAATTGTGTTTAGCACTCATATTTAAAATAATCATGACAGTCTTCACCTTTGGTATTAAGGTAAGTGTGAATG .:....xx....:x.x:x.........x:-....:..:..:.....:..x..x...................................:..............:..............x........:.....:..:..:..............:.....:..x..x..................:.x............:.:..:........x.....:........x........:x.:.....:.....x.................:..:..:..:.....:.....:..:..:.....:.....:...........x..x..x.....x..x..x..:...........:..x...........:.....:..x..:........:..:...........x..x:.:..:.....:..:..:.................:........x..:.....x..x.....:........:.............:......x.................:..:..::.:.................x..x........x.....:.....:..:..........:x.... 29M1D561M 495/590 83.9% 590/94230402 0.0% 1/590 0.2% 101900802 88313753 +15615 chr4 + 190214555 169703981 169703980 169704197 217 TTCTGTTGTTGTTATAGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGGATTGCGGTGGAGCAGCTTGCCTACTATCACCACGACTGGTTTATCTTTAAGGAGTGGTGTGAGGTCGGGGCTGATTGCATTACACCTGGCCTTTATGCCATGGTTGGTGCTGCTGCATGCTTAGGTAATATGGCTGT chr4 - 94230402 67799235 67799234 67799451 26430952 26430951 26431168 217 TTCCATTTCTGTTGTAGGTTCCATCTGGGTTGTTCATACCTAGTATGGCAATTGGAGCAATAGCAGGAAGGATTGTAGGGATTGCAGTGGAGCAGCTGGCTTACTATCATCACGACTGGTTCATTTTCAAGGAGTGGTGTGAAGTTGGAGCTGACTGTATTACGCCTGGTCTTTATGCCATGGTTGGTGCTGCTGCGTGCTTAGGTAACTAAACTGT ...::..x:....:...........x..x........x..:..:.....x........:..x..............:........:...........x..:........:...........:..:..:..............:..:..:.....:..:.....:.....:..........................:...........:xx::.... 217M 183/217 84.3% 217/94230402 0.0% 0/217 0.0% 101904746 88309809 +30093 chr4 + 190214555 169706859 169706858 169707296 438 TTTTTTCAGGTGGTGTGACAAGAATGACTGTCTCCCTGGTGGTTATTGTTTTTGAGCTTACTGGAGGCTTGGAATATATTGTTCCCCTTATGGCTGCAGTCATGACCAGTAAATGGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATGAAGCACACATCCGATTAAATGGATACCCTTTCTTGGATGCAAAAGAAGAATTCACTCATACCACCCTGGCTGCTGACGTTATGAGACCTCGAAGGAATGATCCTCCCTTAGCTGTCCTGACACAGGACAATATGACAGTGGATGATATAGAAAACATGATTAATGAAACCAGCTACAATGGATTTCCTGTCATAATGTCAAAAGAATCTCAGAGATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAATTGCAATAGGTA---CCCTTTCAAAAATATATATATGTATAT chr4 - 94230402 67800684 67800683 67801124 26429279 26429278 26429719 441 TTCTTGCAGGTGGTGTGACAAGAATGACTGTGTCCCTGGTAGTTATTGTCTTTGAGCTAACAGGAGGGCTGGAGTATATTGTGCCCTTAATGGCTGCAGTCATGACCAGTAAGTGGGTAGGAGATGCCTTTGGTAGGGAAGGCATCTATGAGGCACACATCCGACTGAATGGATATCCCTTCTTGGATGCAAAGGAGGAATTTACTCACACGACACTGGCTGCTGATGTTATGAGACCTCGAAGAAGCGACCCACCTTTAGCTGTTTTAACACAGGATAATATGACAGTAGAAGACATAGAAAACTTGATCAACGAAACCAGCTATAATGGATTTCCTGTTATTATGTCAAAAGAATCACAGAGGCTAGTGGGCTTTGCTTTAAGAAGAGATTTAACTATTGCAATAGGTAATTATCTCCCAATATTTTCTAACTGTATAT ..:..x.........................x........:........:........x..x.....x:....:........x...:.x.......................:.....x..............:...........:.....:............:.:........:..:..............:..:.....:.....:..x..x...........:.................:.::..:..x..:........::.:........:...........:..x..:.........x....:..:...........:..............:..x..............x.....::.......x.....::.x........::.:..x.............---x:..::...x.x.x.x..xx....... 411M3I27M 369/438 84.2% 441/94230402 0.0% 3/438 0.7% 101906175 88308380 +17518 chr4 + 190214555 169713060 169713059 169713339 280 CTCTTCTCTCTCTTTTCAGAAAGTGCCAGGAAAAAACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCCCTTTTACAGTGACAGACCACACCCCAATGGAGATCGTGGTGGATATTTTCCGAAAGCTGGGACTGAGGCAGTGCCTTGTAACTCACAATGGGTAAGT-CTGGTACCACAGGAATCAGTTCACTTGCTAGAATATAG chr4 - 94230402 67802715 67802714 67802993 26427410 26427409 26427688 279 CCCCTCTCTCCCCTTAAAGAAAGTGCCAGGAAGAAGCAGGAAGGGATTGTTGGCAGTTCCAGGGTCTGTTTTGCCCAGCATACCCCATCACTTCCAGCAGAAAGCCCTCGGCCCTTGAAACTTAGAAGCATACTTGACATGAGCCCTTTCACCGTGACAGACCATACCCCTATGGAAATAGTGGTGGATATTTTCCGGAAGTTGGGTTTGAGGCAGTGCCTTGTGACACACAATGGGTGAGTAATGGGGTCACA--ATTCTGTTTCTTTTGTAAGGTATAG .:.:......:.:..xx...............:..:..:.....x..:...........:x....x........x.....:........x..............:........x.....:...x.......x.................:..x...........:.....x.....:..x.................:...:....x:................:..x..........:...-x...x::....--.x..x...:x:..xx..:::..... 242M1I11M2D25M 229/278 82.4% 279/94230402 0.0% 3/278 1.1% 101910345 88304210 +76434 chr4 + 190214555 169717623 169717622 169721448 3826 TGCAAAAGGAACCTG----GAACTTTAAATCATTTTGTTTTTA-----TTTTCTAAAGTTCATGAGACTCATTCTTATGGTTCATGTTTTTATTTT----TTCTCTCATTCTTTATCATTATGATTGGAAACTCTTTTAATTTAATTTCTCACACAGTTATTAGCATAATA--ATCTGTTTCAGGATTGTCTTGGGGATCATCACAAAGAAGAACATATTAGAGCATCTCGAGCAACTAAAGCAGCACGTCGAACCCTTGGTGATTAGATATATCAGATCTCCTCATTAGACACCTTAGAAGTCAGGAAGCATGAAACTTGTGAACTGTTGAGTTCTGTCTTTCCCAGATATCTGCTGAACAAAAATATCCTACTATGCTGCCAATTACATTTGTATCTGATAAAATGTGTCTGTAAGATAAATTTAGATATGTGTAAAATCCCATTTATAGAAAGTAAGCAAAAGTTAACATCTCTCATCAAATCATTCATTACAATTTCAGAACTGTAAACAGTTTGGTAGTGGAATAAGTGAATATTATTGGACATTCTTAAAGTGAATATGGCAAATCTGTCTACCT---CAGTGGATACACCGGTCTCAGAAGACACCTGACTGGTTAAAAATGTCTGACCCATCCCCGCAAGCCCTTTTTTTTTTTTTTAAATGTTTCCCGATCTTGTGGTAGTCTTA------TGGTAAATCTAAGCTCCTAAAGGAT------TTTAAAGGAGCTTAGCAA-------TTAGAACTGCTTACAG--TTAAATGGATTTTTTAATGGGCA---CACTAACTAGAGTGTAATGTGTATATTATTTGTGATCATAGCATTAGTTCTTTTTCTGCTATACCCTGCATATCTTCAAAGTCACAGTGTGTGTCCTGCCATCTCATTAGTGAATTGTACCTAGATTATGT-GTGTGCCCCTTTTGTATGATGTTTCTGGAACGCTA-TAAGCAGCTTTTAGAGTCAAATGCATTCATTTTAACTGGCTTTATGTCCTA-GTGGTTTCATGACTACAAATTTGAATTATCTTACTGCA----TAACATAAAAAATGTCTGGCTTTAGCAATTAATGCCCGAAATTATTTTGCCCTGCAATTGTCATACCTGTATGAAACCTGTCCC---AGTTT----GCTTAAGTGCACAAC----TGATTATGTATTCCTGTGTGTATGCTAATATTTCACAAGTGTTTCATGCATCCTTTTTTAAA-----------AAAC-------TACTAACCAGAATATTA-TCGTAGCTACTCATTCATTCTGCTTTCTGCTTCACCTATAATA--ATCTTTTAGGACTGCCT-------TCTGATTTTTCACCTATCTTTTAATGTAAGCATTAACAACTAAG--ACTTTCATAAAAGCACTGTATCTTAACTTTCCTGGCCTAAATCAAAAAAAGGAAAACATTGATAAGTGTCCTAGAAACTTGGATTCTTTTATAGATTTGTTCTTGGGGCTCTGATGTTTGGGATTGACGTTCTGTGCTGACCATTTTATATGCATTTTATCTTAATAGTATGTGCTTTCATGAAGATTCTGATACA-AGTGGGCAATCCTTAAATTATCTTTGAAAAATTGGTTAATTTTGGTTAAAAAAGGGAAAGTGGCTGGGTGCAGTG-GCTC--ACGCCTGTAATCCCCAGCACTTTGGGAGGCCGGGACGGGTGGATCACAAGGTCAGGAGTTGAAGCCCATTCTGGCCAACATGGTGAAACCCTGTCTCTACTGAAAATAATTGGGGCATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATTGCTTGAACCGGGGACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCTGTCTCAAAAAATAAATAAATAAATAAATGAAAAAGAGAAAATATTGAGAGGATTTGGTCATCATTTTACTGCTCTCTTCATGTGATGGAAATCAATTTTCCTTCTCAAATGGGATCAGTATCATTTCCTAGTCATACATCCATCCAGTTT-------------------------------TTGTTACTTTTTTGTTGGCATACATTAATCAAAATAGCTCTGCTTCATTGAGGCA---------------------------------TGCAGTCCTCAGACTCTCGGTGGAAAGGCTGTCATACTATTAGTGACCAT--AGTA------------------ACTTTTTATACCAAAGGATGGTTGCTGGATAATTTTAATATCTTTACCAATAAAGTACTTTT--TGGAAATACAAAATCAGGCTGCTTGCTTT-GCTCTATTCCTGTCAACAAAAAGGATTTAGCTATAGATTTAGCTTCTCCTTTTATTTTCCCTTTT--ATTTCATAGGAGTCTTCTGTTTATTCCTTTCAGGCGCCTCCTTGGCATTATAACAAAAAAAGATATCCTCCGGCATATGGCCCAGACGGCAAACCAAGACCCCGCTTCAATAATGTTCAACTGAATCTCACAGATGAGGAGAGAGAAGAAACGGAAGAGGAAGTTTATTTGTTGAATAGCACAACTCTTTAACCTGAGGGAGTCATCTACTTTTTTTTCCTCCTTTACAAAAAAAGAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAATGGAGGAGTTGTTTGGGGAGGGAAAGGAGAGAGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTGGATGCATTCAGCTGAG---GATGTGCC-TGATAGTGC------AGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTATTTCTAGAGGGATTACTTTGAATTGAGCCATC-TAT-AAAACTGCAAGGTCTTGCCCTTTTTTTTAATCAAAACTGTTCTGTTTAATTCATGAATTGTATA---GTTAAGCATTACCTTTCTACATTCCAGAAGAGCCTTTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTGTGATTTTACTGAGGTTTCATCACAAGAAGGGA-GTGTTTCTTGTGCCATTAACCATGTAGTTTGTACCATCACTAAATGCTTGGAACAGTACACATGCACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCGAAGGAAGCGAGAACGAAATCTCTCA--TTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGAAGCTTGGTTTTAAAGGATAAAGTTTTCTTTTTTGTTTTCCTCTCAGACTTTATGGATAATGTGACCGGGTCTTATGCAAATTTTCTATTTCTAAAACTACTACTATG--ATATACAAGTGCTGTTGAGCATAATTAAATAAAATGCTGCTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAATTGCATGTTAAAACACTGGA---ATTTT-------TAAAATTGAAATTAGATCAGTCATTCTTTTCTTTTCTC--------AAGATATCTCATGGCTGACACTG-AAGAAGAAATGTAATTCATAACTTGCACTAAATGTATATTTTTTTTCTTAAAAATTTACCATTCTTATTTATATTTTTATGGATT-----AAAATTTATAAAATACAGATCAGTTAATATTGCACTTAAGTAATTTTACCTTTTTAATGTGATTTTTATAGAATAATTCAGACT----TACAAATACAGAGATATGAACAAA-GTTTACAGTGGGAACAAAGGTTTAAAAAAAGGTTGTGGTTCTCTCTCTGTGATCCAGTGTGCACATAA-ACCTTTCTCTGAT----CTTTCACTGCCATCCTCTGGATTATGTCTTCTGACCTGTCCATTTTGACCCATTAACTGGAA chr4 - 94230402 67804985 67804984 67808408 26421995 26421994 26425418 3424 TGGGAAAGGATGCTGAGCTGAGTTTCAAACCATTCTTCATTTAACTATCTCATTAACTTTCTTGCAACCCATTTTC--------TTTTTTAGTTTTGCACTACTCTAAACCTTTTTCATTGTGACTAGAT-CTTTTTTTATTTGATTTCACACACAGTTATTAGCATAACATGATCTGTTTCAGGATTGTCTTGGGGATCATCACAAAGAAGAACATATTAGAGCATCTCGAGCAACTAAAGCAGCACGTCGAACCCTTGGTGATTAGATATATCAGATCTCATAATTAGACACATTAGAAGTCAGGAAGCATGAAACTTGTGAACTGTTCAGTACTTTTAT-----GACATCGGCTGAACAAAGAAATAATCCTGCATTAA-----ACATTTGTATTAAAGAAA------CTATAACAGAAAAC--AATATGTGCAAAATCCT-TTTATAGAAATGAAGCA---GTTA----CTATGGACGGTCTGTTAGTCACAACATTAAA---GGAA-------GGTAAAAACAGAATTTGATATTTT-----GTTCTT----TGGATCACGTAGATCCGCCTAGTTGGCCTTTTGATTTCCCTTGGTGGGAAAGCACACAGCCAG----GAATACCT----TTTCCCCCACAGTATAAATTTATTTTTTCATATG----CTGATTTTG--ACAGCTTTAAATAGCTGTTAAGTT---GCTAATTAAGCATCATATATTTTGAGGAGCAAAGCCAAGCACGTTCTTAATGTTTTGCAGCATTAGGTCTTCCCTGTAGTCCTCATTTCATCAACTGGGAAATAA-GAGCGT----TTTTAAAAAATCACGTAAAGTCCTTTAATTTTATAC-------------AAAGTC-CTGTAATTCTGCTGCTGT---------------TACCTACAGCAACTAGTGCACTCCAGTGGGATCCT---------AAGCTACTAAACAGC------ACGCTAATACACCTACTGT---TGACTTCAGAATCTACGTACTGTTTTAAGTACGATGTTG--TGATCTAACCTTAGTTGTAAGATAGACTTTGTCTTAATTTGGACATTGGT--------------TGCTCTGCAATAGCTGCATCTCTGCTAAACCTAGCCACCAAGTTTAGCTGCTTATGTGCAAAACGTGCTAATTATGTTCTCATTT---TATGCTAATATTTCACAAGTATTTCATGCGTCCTTTAATAAATAAAAAAACCCAAACCAAAATGTACTAACCAAAATAACAAGGGCAGCAGCTCATTCATTCTGCTCTTTGCTTCTCCTGTGATATTATCCTTTTGGACAGTCTCACCCTTTTTGATGTTTCACAGAGTTTTCCTTTTAAA----AGCAATTTAGTTGCTGTCATAAGAGCACAGTATCTAAAGTT---------------GAAAAATGAAAACTTTA-------------------------TTTTAT----------------------TATTCATAATTAATTTTCTG--------------------------------AAGCTGTG----------AACTCTAAAACCTAGTTAACTATTC----ATTATTTTGCAAAAGTT------TCATGGTCAATACAA--------------TACAGTGTGCTCCTATGAATATATTC---------------AGTCTGAGCCAGTGTGTCAGATGG-------------------------------GAAAGACCCT---------------------------------------TGTGATTT-------TTAGAAAGAAGGGG-AGGGGAGT----------------------------------------CTGATTTGCCGCTATAGGATTTTGG----GGCCATCAAGC-----------------------------------------------AGTAT------------GTCACC-TCTGATGGCT---------TGGCTGGAATACACTTCCCTTATGAAATGGGATCAATATCACTTCTTTTTCATACCTCTTTTTTCTTTGTCCTTCtttattttattttattttattttattttTACTTTTTTGTTGGCATA-GCTAACCAAATT---TCATTTTTGTGGAAACAAAATGTTAAATAAAAATTGTCACGGACTCTACTTGCATTACTTATATT-TAATTAAAATGGACTACA-GCTGTCAGAGACCATCCAGTATGGTGTCTCAGCATTGCTGTCTTTTA-ACAAACTGGTGGTTACTA---------AATATTTTGATTAATAAAATGCTTTTGTTTAAATAAGAAAATCAGGCTGCTTACTTTTGCTCTGTCCCTGTCAACAAAAAGGACTTGGCTACCGATGTGTTCTGTTTTACTACTTTCCCTGCTCGGGTTAATACTGATCTT-TGTTTATCCTTTTCAGGCGCCTCCTTGGCATTATAACAAAAAAAGATATCCTCCGTCATATGGCCCAGACGGCAAACCAAGACCCCGCCTCAATAATGTTCAACTGAAACCCATAGCTGAGGAGAGAGAGGAAACTGAAGAGGAGGTTCATTTGTTGAATAGCACAACACTTTAGTCTGGGAGA------TACTTCT--------------------AAAAATCAGAAATGAGAGCTGGGTTTTTGTG-----------TAACAGTGCTGCTGGAAATCAGGAGTTGGTCTGGGGGAATATGTGGAGAGGAGGAAGGCTGTTGGG----------------------AGCATGGGAGCTGC---TGTCCTGCACTGGATGCGTCCCGAGATGTCCGGTCTGCCATGATAGTGCAGTGGGAGAGCCGTGC-------GAGGTG---GCACAATTCTCCAGC-CCCAGCCTGGTACTTCAGCATCGAAGAGTTGTGTTACTAGTCCCTATTTCTGGAGGGATCCTTCTGAATTGAGCCATCTTATGGAGACTGAAAGGTCTTGCCCTTTTTACCATTGAAAACTGTTGTG-TTAACTCATGAAATGTATAATTATTACACGTCACCTTTCTACATTCCAGAAGAG-CTTTATTTCTCTCTCTC------------------------CTGAGCCGTAACAAAGCCTCTTTAAATTGGTGTGCCCTTTTGAAGTAGTTGTTTCTCATATTGAGATGTACTGTGA-GTTACTGAGGTTGGATCACAAGAAGGGAGGTTTTTCTTGTGCCATTCAGTGCGTAAGGTTGAACATCATGAAGTGCTCGGGGCAGTACAGATCTACTGCGACAAAAGCAGACTGAGCAGGTAATACCTTGCAAGAGCCATGCGAAACATCTTTCAGCCCATCTGCCGCGTGA--TAAGAGAAAAAGTAAACAAGCTAGAGTTGCAGAGAAAAAA-------TACTGGTTTTGCTGCAGAAAATATCAATAATGTGACCTGATCTTATGCAATTTTTGTATTGTCGAAAC----ACTAGGGTATATACCAATGTTGTGCAGTACAAC---GCAGAGTACTGCTGTTCTGCTAGTTAAGAGCTGGAACAATTCTATATACGTGTATCTGGAA--AAATGCATGCTACAACACTGGAGATATTTCCCCCCTGTAAAATT----TGAGATCGCTCATTTTTATTTTTCCTTCTCAACAAAAGACGTTCCACTGCTGACATGGTAGGAAGAAACGTAACTCATAACTTGCACT-AATGTATATTATTTTTCTTGAGGTTTTACCa---ttatttatatttttatgaattaaaaaaaaatctattaaataCAAATCAGTTAATGTCTCACATAACTAA--TTACCTTTTTAATGTGA-TTTTATATAATAATTCGTAATCCTCTGCGAGTCGTGGAGGATTAGCAAATGTTTACAACTAGATGAAGGGTTTAAACAAA-------ATTGTTTCTTTACGATCCAACATGCATATAAGATGATTTTCAGATGTAACTTTCACTGCCGTTACC----TTAAGACTTCC--TTTTTCCTTTCTGAGCAGATAACTGGAA ..x:......xx...----..::..:...:....:.x:x....-----:.:x:...xx...x..x:..:....:.:--------.x....x:....----.x....x.x:....x.....:...:.:..x-..:....x....:.....x...................:.--.............................................................................................................x.x.........x...................................x...x..x.:x.-----..:...x..........:.x..xx.x..::::.:x-----..........:x:.x...------..:...x.x...x:--:.......:.......:-..........xx.....---....----..x.x:x.::x:::..x:.:....:x.:.:.---.x..-------....:x::x.x..x.x:.....x.-----:.....----..:..xxx.:.:...:.:...x:.---.xx.x...x:x..xxxx.x:...::...x:::.::.----:...::..----:x.....xxx..:x:xxx...x......:.x...----.:...:...--::..::...------..x...:.:---...xx.x...x..------...x:......xx...x.-------.:xx..:xx:..:...--...::.xxx:::.x..:.xxx..---..::....:.::x:...-.x.::.----...xx:.xx..x:.:.x.:x..:...xx.x:.....-------------......-.x..:xx.x.x....::.---------------......x.x:.xx.-...::.:..xx.x.x..xx.---------.x....-...:....------.xx.x...:..:::.:.x.---..:...:.x:x:...-..:x.x.:x.:.x...:.xx...--.x....x..:x:.----...x...:.xxx.....x:x...:.xx...::.--------------...:.......x.::::.:..x.::x......:x..x---.....----.....x.....x...----.:.......x:..x.x.---....................:........:......xx....-----------....-------.........:....x:.-xx.:...x:...............:.:......x...:.:...--...:...x....x.:..-------.:....x......xx.x:...:xx.x...:----.:...:.x..--:..x......:.....x......x..x..---------------:.....x......x..:-------------------------......----------------------.:..::x:...:.:x.....--------------------------------.:xx....----------:.:...:.x..x-...x::.x..:.----.....:..xx....:..------.:x....:..x.x.:--------------.:.....-....--.:.xx.:..x..---------------:.:.x.::.x:...x:...x.x..-------------------------------.x:.:.....---------------------------------------...:..::-------..:.:...xx.:..-...:..:.----------------------------------------....xx.xx...:.:x.x.:.:::.----...:.:x:...-----------------------------------------------.:...------------....:.-.:.x.:x...---------..::x.:...xx.:..:....x.x...........:.....:...:.xx......x..:x.::xx...-------------------------------..x...................-::...:....x.---..xx:..::.x..::..---------------------------------....x.x..:.x.:.-.x:x.::..x..x:xx..-:..:.:..x......--....------------------:::.....-..x..xx.:.....:..:---------.....:..x.::......:.:.....--.x:..xx.x...............:....-.....:.:.................:..:....:x...x.:x::.x.::.x:..:.......x:.--:x..x...xx::....-.......:.:.............................................x................................:...................x.:..:..x............:.....x........:...:...................x.....::...:.:..------.....:.--------------------.:...xx.:.x..:.:...:.........::-----------x..:.:.....x.....xxx........x.:x...:.::x.x.x:.....:.....:.xx..x:..----------------------...:.:xx.:..x.---...:.............:.:.x.xx:x.---.:.x....-.........------..:x::.:..-------...:..---...x.:.:...x...-..::.....x.:..:..:...:.x.:..x::::...::.............:.......:x:.:..............-...-:.:....x.................x::.x.x.........x..-....:.......x......---:...x:.:.:......................-.................------------------------......:....................:.....::..........:...:x.........................-x...........xx..............-..x..............x.x:::...:xx.xx.x.....:x..:....:..::.......x..x:..::.:.....:..xx.:::.:.......x::..:.x.:..:x.:x.x:x:.x....:...--:::.x.....:...:--:..:.xx:...::..xx.....x.:x..xx.::..x...:-------.x:..x...:x::x....xxx...x:...........x.:..........x....x....x:::....----....x.--......x.:..:...xx..:.:..:---::.:.:.:......:.:..x:...x.....xx....xx.....:xx..xx.........x.--..x......:..x.........---....:-------.......----.x.....:x.....:..x.:...:..:--------....::.::..:x.......:x.-.:.......:....:..............-..........x........:.::x.......---.................:...-----.....:...x.......:..........:.:x...x...x...--.................-.......x........:x.x.----.:.:.:.xxx.:::x..x.:....-.......::x:..xx..:........x...-------:..x.:...:.::......:::....:....-.:xx..:..x...----...........:.:x:.----...x.x....:--::.x...x..:...x.x:x......... 15M4I24M5I28M8D12M4I30M1D40M2I169M5D35M5D18M6D14M2D17M1D17M3D4M4D31M3D4M7D24M5D6M4D24M3I36M4D8M4D34M4D9M2D9M6I9M3D13M6I18M7I16M2I23M3I17M1D6M4D36M13D6M1D18M15D14M1I20M9D6M1I8M6D19M3D15M1I23M2D13M4I33M14D37M3I5M4I15M4I17M3D42M11I4M7I17M1I43M2I17M7I30M4D10M2I29M15D17M25D6M22D20M32D8M10D12M1I12M4D17M6D15M14D7M1I4M2I12M15D24M31D10M39D8M7D14M1D8M40D25M4D11M47D5M12D6M1D10M9D68M31I22M1D12M3D17M33I15M1D18M1D15M2I4M18I8M1D18M9D26M2I29M1I65M2I16M1D184M6D7M20D31M11D66M22D14M3D28M3I8M1I9M6I10M7D6M3D15M1D78M1I3M1I44M1D19M3I32M1D17M24D76M1D28M1I126M2I15M2D40M7D68M4D6M2I25M3D61M2D22M3I5M7I7M4D27M8I23M1I29M1D31M3D21M5I43M2D17M1D21M4I24M1I30M7D31M1I13M4I17M4D11M2D28M 2316/3187 72.7% 3424/94230402 0.0% 876/3187 27.5% 101912638 88301917 +10869 chr4 + 190214555 169722882 169722881 169723225 344 TGAAATTGTTGTGCCTG-GCTAATTGGCAAATTAATTTACCAATATAATAAGTGTAGCGCCTTGTTTGAATACCCTTTTTGAGAAGGTAT---------GATGAGAATGGGCAAGGGTGTCAGCATCTCTTCTTCTTAATAATTAATTGTTTTCAGTT-TTGGTTCACGAAGAATGCTTA----GTTAATCTGTAATGTTGCCTAGAGCTGTATTTATC---------------TGTTTTTATTTATACTAGTGTAGTAAAGCTGCATATCATTACAGTAAAAA---CGACTACTGTGATGAGTTAATCAGAAAATCTATTAAAA---TCTATATGACAATGTGTGGTTTGGCCTT--TAATTATATCTGTAACAGTCCTCC chr4 - 94230402 67809684 67809683 67810056 26420347 26420346 26420719 373 TGAAGTGTGTGTGCCTGTGCTGTTCAACAA--CATTTTTCTAATGTAAAGCTTCCAGCGCCTTACTCAAGTACTGATTTGAAGAAAAAATAACGTGGTGGATGGGA--GGGTGAAAGTGTCAGCATTATTATTTTTTTTTGTTTTAAACCATTCAGTTACTGGTTGATGAAGAATGCATACTTTGTTAATCTGTGATGTTGCCTAGAGCTGTATTTAATATTGATTGAACTTAATGTTTTTATTTATAATAGTGTGGTAGAGCTGCATATCATTACAGTAACAATCCCCATTACTGTGATGACTTAATCAAA-----CATTAAAAACTTCTGTATGACCATTCGTTGCTTCGACTCCGTCGTGTTTTCTCAAACAGTCTTTC ....:.xxx........-...:x.:::...--:.x...x.:...:...x:xx.x:........::.::.:...:xx...x:....::x..---------....:..--...::.::..........:x:.x:..:..xx.:x..x.xxx:x.......-:.....x.:.........x..----..........:......................x:---------------..............x......:...:.....................x..---.x.:...........x.......:.-----:.......---...:......x..x:..x.:..x.x..:--.x:.xx.x...xx.......:.:. 17M1I12M2D58M9I7M2D50M1I21M4I35M15I50M3I25M5D8M3I28M2I24M 247/335 73.7% 373/94230402 0.0% 47/335 14.0% 101913198 88301357 +11369 chr4 + 190214555 169731697 169731696 169731885 189 TACTCACATGTGAGCCATAGCAAAAGAGATCCATTCCCAATTCAAGCCCCATGCCATAATCACATTCATCATTAGCAAACTGCACAAAAGTCATCATTTCCTGAATGGGAGCAAAAGCTTTTAGTCTCTCCTCATCACTTGCAGCCTCAACTATTGTCTTGCAAATTCTCTTGAGGTCAGCTGAAAGAA chr4 - 94230402 67812950 67812949 67813138 26417265 26417264 26417453 189 TACTTACGTGTGACCCATAGCAGAAGAGGTCCATCCCCAGTTCATATCCCATTCCATAGTCACATTCATCGTTAGCAAACTGAACATAGGTGAGCATTTCTTGAATGGGTGCAAATGCCTTCAGTCTCTCATCATCAGTAGGAGCGTCAACAATGGCCTTACATATTTTCTTAAGATTAGCTGCAAAAA ....:..:.....x........:.....:.....:....:....x::.....x.....:...........:...........x...x.:..x.x......:........x.....x..:..:........x......x.x.x...x.....x..x.:...:..x...:....:..:.:.....x..:.. 189M 150/189 79.4% 189/94230402 0.0% 0/189 0.0% 101918747 88295808 +7289 chr4 + 190214555 169737646 169737645 169737832 187 ATGAAATACATTACCATCTGTTTCAGGGAGCTCTCGGTACCCAACATCATTTTTATCTACTGGAACAACCAAGCCTGCACCATGAAAGGTCTTTGTCACAACCTACATTAAAGA---AAAGAATAAAATGTAATCATGGTAAGCAGACATCAAAAAAAAAAATCCCCAAATACATAAACCCTCAACATTT chr4 - 94230402 67813687 67813686 67813873 26416530 26416529 26416716 187 ACAAGATAC-TTACCATTTGTTTCGGGAAGTTCTCTGTATCCAACATCATTCTTGTCTACCGGAACAACCAGGCCTGCTCCATGAAACGTTTTGGTCACCACCTACA-AAAAGAGCCAGGAAATGAAATGTAGT-ACTGTCAGTCAATACTATGCCATAAAACCATTCACTTCATTAAACGTTAGCACCT .::.:....-.......:......:..:..:....x...:...........:..:.....:..........:......x........x..:..x.....x.......-x.....---.:::...:.......:.-.:x..x..:x:.:.::.x:xx.x....:.x::x.x.x...x..x.x.:.:..::. 9M1D97M1D6M3I17M1D55M 132/184 71.7% 187/94230402 0.0% 6/184 3.3% 101923959 88290596 +11651 chr4 + 190214555 169741853 169741852 169742122 270 AAGATAGGACTAGGGAAGAGAAGGGTAAAGTAGAGATGGGAAGGAATCAAGAGGGGAAAAAAATATGCTATAGCAAAACAGAGA-----CCAACAGGTTG---AAATCATACTTTCTTATCTCTCTGTTTCATCTTCACGGTTCTCTGTTCAAGCGAGTACCCCAATTCTCTGGCTGCTTCTGTGAGTTTTTCATCTATGTTTTTCAAGAGATTGATTTTCTTTTTATCCGTTATTTCTCTAAGTTTTTTCGTCAAAAATAATCTG-AAAAAGAAGTAA chr4 - 94230402 67814365 67814364 67814632 26415771 26415770 26416038 268 AAGGTAGAA--AAAGAAAACAAAAGTCAGGCAAGTAAGTGGAGGAA---------GAAAAAAAAGCAGTTTAACAGAACTTAATTCTCTCCAGTGGATCAGGAAAGTCATACTTTCTTATCTCTCTGTTTCATCTTCATGGTTTTTTGTTCCAGAGAATAACCCAATTCTTTTGCTGTTCTTGTTAGTTTTTCATCTATGTCTTTCAAAACAGCGTTTTTCTTTTTATCAGTCACTTCCTTAAGTTTTTTTGACAAAAATAATCTGTAAACAGAAGAAA ...:...:.--.::...:.x..::..x.:.:.::x.x.x.:.....---------........x:::x.x..:..:...xx.:x-----...:::.:.::---..:................................:....:.:.....x..x..:..x.........:.x....:.::...x................:......:.x.x:.x.............x..:.:...::..........:.x.............-...x.....x.. 9M2D35M9D29M5I11M3I163M1I12M 195/259 75.3% 268/94230402 0.0% 20/259 7.7% 101927488 88287067 +6687 chr4 + 190214555 169748712 169748711 169748909 198 TTGTAAACAAATATAAATTAAAATATTCTTACTTGACTGCAGCAAATACATTATCTCCATTTGGAACAATTATACAATTTTTCTTTGCTTCATTTATACCAACATATACAGGAAATTCATCAGGAGAATCCCTGTGTAAGCAAAAG-ACAT-TAAAAATTTAG---CTGCCCATAATTTATATTATCAGGCAAGTGGGATTTC chr4 - 94230402 67815615 67815614 67815814 26414589 26414588 26414788 200 TTATAAATAAAAGTAAATATGAAC---CTTACTTGACTGCAGCGAATACATTATCACCAACTTGTGAAATCAGACAGCTCTTCCTTGCTTCATTTGCACCAACCCACACTGGAAGCTCATCTGGCACATCCCTATTTATGAAAAAATACATACAAATATTCAAGCTGTGCCCATTTCTCCTATTCCGAAGTGAGATTAATTTC ..:....:...x:.....xx:..:---................:...........x...x:.x.x:x...:.x...::.:...:...........::......x:.:..x....::.....x..x:x......:.x..x.x....:-....-:...x...:.:---x.......xx:.:x....x:x.:.::..xxx:..... 24M3D119M1I4M1I11M3I37M 136/195 69.7% 200/94230402 0.0% 8/195 4.1% 101933097 88281458 +3285 chr4 + 190214555 169749678 169749677 169749775 98 AAACTAAGATTCTTAGGACCTAGTTGCTTTTATACTCAAATACAAAAAAAAAAAAAAAGGAAAAACAAGAAAAAGGATTGTAAAACATTAGAGATGAA chr4 - 94230402 16896758 16896757 16896845 77333558 77333557 77333645 88 AGATTGAAGTTTTTAAG----------TTCTGTACTTTAACAAAAAAAAAAAAAAAAAGGAAAGACAATATAATTAAATGTAAGATCTAAGGAATAAA .:.:.:.::..:...:.----------..:.:....:x..:.x....................:....x.x..xx:.x.....:.:x.x..::..:.. 17M10D71M 61/88 69.3% 88/94230402 0.0% 10/88 11.4% 152852920 37361635 +10857 chr4 + 190214555 169750533 169750532 169750737 205 TACCTGAAATACCCCATGTGGTACTGAGTTTTATTATCTCCAATAATAATGGTCTGGAACTCAGGAGGATCATAGTAAAACCTCCAGTGAAGGTTAAAATTCAGGCCTGTTGATTTTTTCTTCGTTTTATGTTTTCCAGCAAGGATATCATAAGGACCAACTAATTGAAGTCCAAGGCTTGCAGAAAGTGAATCTATAAAGAAAA chr4 - 94230402 67816211 67816210 67816412 26413991 26413990 26414192 202 TACCTGAAATATCCCATGTGATACTGTGTTTTGCTATCCCCGACAAGTATGGTCTGGAATTCAGGGGGATCATAGAAGAATCTCCAGTGAAGACTGAAGTTCACATCTGTTGATTTGGCTT---TTTTGTGTTTCCCAGCAAGAATGTCATATGGTCCAACCAGTGTAAGCCCAACACTTGACACAAGCGCATCTGAAAAGCAGA ...........:........:.....x.....::....:..:.:..xx...........:.....:.........x.:..:...........::.:..:....x::..........xx::.---....:.....:........:..:.....x..x.....:.:.xx...:....x:....xx:x...:.x....:x....x.:. 121M3D81M 153/202 75.7% 202/94230402 0.0% 3/202 1.5% 101934322 88280233 +3015 chr4 + 190214555 169751400 169751399 169751462 63 CTCAAAAAAAAAAAAAAAAAAAAGGTAAAAAACATTTCTATCCCCTTTCCTCTACCTCAGCTA chr4 - 94230402 79382334 79382333 79382396 14848007 14848006 14848069 63 CTGAGGAAAAAAAAAAAAAAAAAAGCAGAAAAAATTTAGAGCCTCTTTTATCCAGCCCAGTCA ..x.::.................:.:.:....x....xx.x..:....:x..:.x.:...::. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 90369066 NA +5919 chr4 + 190214555 169753668 169753667 169753842 175 CAACTCACCAGATGGCTTTTCAGGATCAAGTTCTTCACAGAACTTCCAGAAGTGATAGAAATCTTCAGGTAAAGAAAGCTTATAATGATTTTCTACTTCTTTTCGAAGGTCACTGGAGACATCAGCTTCACAGAATTTACTTTTCTTCACATCAGTTGTTTTTTCACACTGAAAA chr4 - 94230402 67816669 67816668 67816843 26413560 26413559 26413734 175 CAGCCTACCAGCTGGTTTCTCTGGATCTAGTTCCTCACAAAACTTCCAGAACTGGTAGAAGTCCTCAGGCAGCCTCAGCTGATAGCACGTCTCTGCTTCTTGCTGGAGAGCATCCCGTGCCTCTGCCTGGCCTGACCGTCTCTTCTTGACGTCCCCGTTTTTGTCGCACTGCAAA ..:.::.....x...:..:..x.....x.....:.....:...........x..:.....:..:.....:.:xxxx....x...:::xx.:...:......x::.:..:x..::xx:x:.x..x..:.x:.xx:.::xx..:.....x..:..xx:xx....x..:.....x... 175M 111/175 63.4% 175/94230402 0.0% 0/175 0.0% 101936999 88277556 +3039 chr4 + 190214555 169773903 169773902 169773943 41 AAAAAACAAAAAAACAAAAAAACAAAAACAAAAAACGGTTA chr4 - 94230402 38453258 38453257 38453298 55777105 55777104 55777145 41 AAAAAACAAACAAACAAAACAACAATAACAAAAAACAGTTA ..........x........x.....x..........:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 131320645 58893910 +3027 chr4 + 190214555 169775632 169775631 169775672 41 CTTCCCTTTCTATCTCTCTCTCATTTTTTTTTTTTTTTTGA chr4 - 94230402 81156783 81156782 81156823 13073580 13073579 13073620 41 CTTCTTTTTCTCTCTCTCTCTCAGTTTTTTTTTTTTTTTAA ....::.....x...........x...............:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 88618849 NA +3161 chr4 + 190214555 169821473 169821472 169821556 84 GATGAAGAAGAAGATGAAAATGAAGAAGATGATGAAGATGAAGAAGATGATGAAGAAGAAGAACAGATGGCAGAAGAAGATGAA chr4 - 94230402 59322126 59322125 59322209 34908194 34908193 34908277 84 GATGAAGAATCCACTTGTAACCAAGAGGAAGATGATGATGAACATGCTGGTGATCAAGAGGAAGAGGTGGAAGAGGAGGAGGAA .........xxx:x.x:x..:x....:..x.....x......x.x.x..:...xx....:...x..:...x...:..:..x... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 110499347 79715208 +4018 chr4 + 190214555 169843823 169843822 169843905 83 CTGCAACCTCTGCCTCCAGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGTGCATGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGTG ..:..:..:xx:x..:.x...........x...x.xx.x.........:...........:......x.....--....::.. 73M2D8M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 151646697 38567858 +3287 chr4 + 190214555 169882767 169882766 169882832 66 ATACCACCATGCCTGGCTAA----TTTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 66916739 66916738 66916808 27313595 27313594 27313664 70 ATACCTATATACCTGTCCAAAGCATGGTTTTTTTTGTTGTTGTTGTTGTTTTCTGTTTTTTGTTTTTCCT .....xx:..:....x.:..----.xx.....................:...:.x......x.....::. 20M4I46M 52/66 78.8% 70/94230402 0.0% 4/66 6.1% 102966028 87248527 +3166 chr4 + 190214555 169882785 169882784 169882833 49 AATTTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 32236561 32236560 32236609 61993794 61993793 61993842 49 AATGCTTTTTTTTGTTGTTGTTGTTGTTGTCGTCTTTTTTTTCTTTCTG ...x:.....................:.x.:x.:........:...:.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 137646224 52568331 +3446 chr4 + 190214555 169882786 169882785 169882856 71 ATTTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTTGCATTTTTA-GTAGAAATGGGGTTT chr4 - 94230402 25791811 25791810 25791882 68438521 68438520 68438592 72 ATTTTTTTTTTTGTCGTTGTTGTTGGGGTTTTTTTTTGTTTGTTTGTATATCCCTGCATAGGAAGAGGGTTT ..............:..........xxx.........x...x...x.::..:::.:-:...:..x:...... 56M1I15M 54/71 76.1% 72/94230402 0.0% 1/71 1.4% 144090975 46123580 +3008 chr4 + 190214555 169882787 169882786 169882831 45 TTTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 76612852 76612851 76612896 17617507 17617506 17617551 45 TTTTTTTTTTTGTTGTTGTTGTTGGTTTTCTTTACTCTTTCATTT ........................x....:...x:.:...:x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 93269935 NA +3088 chr4 + 190214555 169882788 169882787 169882830 43 TTTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 67801529 67801528 67801571 26428832 26428831 26428874 43 TTGTTTTGTTGTTGTTGCTGCTGGTTTTTTTTTTTTTTTTTTT ..x....x.........:..:..x................... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 102081259 88133296 +3181 chr4 + 190214555 169882789 169882788 169882832 44 TTTTTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 89666552 89666551 89666595 4563808 4563807 4563851 44 TTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTGTT ...................:..:..x.x.............x.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 80216237 NA +3047 chr4 + 190214555 169882792 169882791 169882833 42 TTTTTTGTTGTTGTTGTTGCTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 89666552 89666551 89666593 4563810 4563809 4563851 42 TTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTG ......x..............x...x.x.............. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 80216240 NA +3076 chr4 + 190214555 169892490 169892489 169892564 75 TTTTTGAAATCCTAC---TTCTTTTCTGTGATTTTGAGACAAAATAACTTCTTCTTTTCTTTTTTTTTTTTTTTGAGA chr4 - 94230402 33157537 33157536 33157614 61072789 61072788 61072866 78 TTTCTTCATTCCTGCACATTTTTCTTCATAGTTTTGGAACAGATTAACTCTTTCTTTATTTTTTTTTTTTTCCAGAGA ...:.xx.x....:.---..:..:.:::.::.....::...:.x.....::......x:............::x.... 15M3I60M 52/75 69.3% 78/94230402 0.0% 3/75 4.0% 136734953 53479602 +3191 chr4 + 190214555 169923798 169923797 169923854 57 GGAATGCTTTTCTTCTTT---TTTTGTTTTTTGTTTTGTTTGTTTGTTTTTTGAGACGGA chr4 - 94230402 23073750 23073749 23073809 71156594 71156593 71156653 60 GGAAAACTGTTCTTTTTTCTGTTTTGTTTTGTGTTTTGTTTGTTTGTTTTTTTAACCTGA ....x:..x.....:...---.........x.....................x.:x.x.. 18M3I39M 48/57 84.2% 60/94230402 0.0% 3/57 5.3% 146850048 43364507 +3043 chr4 + 190214555 169923817 169923816 169923869 53 TTTGTTTTTTGTTTTGTTTGTTTGTTTTTTGAGACGGAGTCTCGCTCTGTCGC chr4 - 94230402 50147695 50147694 50147747 44082656 44082655 44082708 53 TTTTTTTTTTGTTTTGTTTGTTTGTTTTTTTTGACAGAAACCCACCCTTCTGC ...x..........................xx...:..:x.:.:.:..x::.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 119776122 70438433 +3022 chr4 + 190214555 169934099 169934098 169934160 62 TATTTTATTTATTTATTTTGTTTTTTGTTTTTACTTTTTGAGAAGGGGTCTTGCTCTGTTGC chr4 - 94230402 5847634 5847633 5847695 88382708 88382707 88382769 62 TATTGTGCTTCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGC ....x.::..x.x.::...x......x...:.x..........:.xx.........:x.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 164086465 26128090 +3027 chr4 + 190214555 169942143 169942142 169942221 79 AGGAAGGCTATTTCACCTTTTTCTTTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTTTTTTTCTTTC chr4 - 94230402 49339929 49339928 49340007 44890396 44890395 44890474 79 AGGAAGTGGATTGCACTATTTGGTTTAGCATTTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTC ......xxx...x...:x...xx...xx.x..::..:..xx.x.x.:.:..:....:.:...:...........:.... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 120602214 69612341 +3095 chr4 + 190214555 169955545 169955544 169955597 53 TTTGCCTATTCTGGACACTTTACTGTTTGTTTTGTTTTGTTTTTGAGAAAGAG chr4 - 94230402 87469875 87469874 87469927 6760476 6760475 6760528 53 TCTTCGTGTTTTGGGGGTTTTTTTGTTTGTTTTGTTTTGTTTTTGAGAGAGAG .:.x.x.:..:...:x::...x:.........................:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 82485670 NA +3374 chr4 + 190214555 169955646 169955645 169955724 79 CTGCAACCTCTGCCTCCTGGGCTCAACTGATTCTCTTGCCTCAGCTTTCCAAGTAGCTGGGATTACAGACATGCCCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:..:..:xx:x..:.....:....x..x...x.xx.x......:..:...........:.:...--..:...x.... 66M2D11M 56/77 72.7% 77/94230402 0.0% 2/77 2.6% 151758520 38456035 +3937 chr4 + 190214555 169957665 169957664 169957735 71 GTCTCTGGGTTCAAGTGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGTAAGCCACTGTG chr4 - 94230402 18197138 18197137 18197206 76033197 76033196 76033265 69 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .::..............x...x::x.x........::.............:....--...:x:........ 55M2D14M 55/69 79.7% 69/94230402 0.0% 2/69 2.9% 151760527 38454028 +12498 chr4 + 190214555 169971423 169971422 169971953 531 CTTAGAGGCATGGCAAATGAAAATGAAAACTGGATTCATGGGTAGA---TACTTCATGAATGAGAAATGTACAAATTTAAACAAACGTGAGATGGTCTAATTTATTGGGATGCTTTTATTAAGCAAGTATAAATGGAACATCACAGGA-------GAGAAGGCTGGTAGTTCTTCAGGCTGTAGAAGCTGCATTTCTGTTCTAAACCACACCATCACGATCATTAGTCATTCATGATTGAAATCAATGATTCCACCTTCTGACGGCATTTGTTCACTGTTCCCAGGAACTGCCTTCTCACTTCCCTCAAGAGGGCTTTTAGAACTTTAAGCTTTCTCTCTCGGCCTGTTTATTGTGCA-----CTGTTCATTTGCAGAGTGGCTGCAGTATCCTGTGCCAGTTTGGCAGCGTAAGGAGGATTTGCTCTTACATTCTCCCAAGAATAAGTG--TTAGCT-CTCTGGTGACTTAGAATTCCCTTC---CAAATGA-------CGACTGTGGCTGGAGAGCCCAGGAACTTTGTGCCAATCAGTCCTCGTTTCTATAGCTAC chr4 - 94230402 67854746 67854745 67855274 26375129 26375128 26375657 529 CCTAAGAACTTAGTGAAACAAGAAGATAATTGGATTAATGTGTAAAATATAATCTTTGAGTCCAA------CAGATCTAA-CAGATGTGACACTGTGC----------------TTTATTTGATACGCGTAAATAAAGTATCACACAATCTATTAAAGAATGC----AGTGCTTTGTACTGCAGAATCTTCCATTCTGTTTCCAACCTCATAGCCATAATCATAAGTCATTCATGACAAAAATCAATGTCTTACTTTTCTGATGGCTTTTGTTCACTGTTCTTCAGAACTGTTTTCTATCTTTTCTCAAGAGGGTGTTTAGAA-TTTAAGCTCCCTCTCTCTGCTTGTTTATTATGTATAGTGCCATTCATTTTCCAAGTGACCACGGTGCCAAGTTCCAGCTTGGCA-TTTGTGGAACATTTTC-CTTTCACTCCCTTGAGAATGTGTGCTTTGGCTGCTCTGTTGCCAGCAAATTCTCAGCACTCTAATGAAGTGGTGTGGTCTAGGCTGAAGTGGGCAGAAATCCTACCAGCATCTCTCTTAGTGTTTGTAGCTGC .:..::::.x.:.::..xx..:.x..x..:......x...x...:.---..x.::x...:.xx:.------..:..:...-..:.:....x.:x..x:----------------......x:::.x.::.....::.::......x:.-------:....x..----...x...::x:...:....x..x.xx.......::x....x..:x::..::.....x............:x:.........x:.:xx::......:...x..............::x:......::....xx...::..........:x.......-........::.......x..:........:..:.-----.::.......x.x:....:.::.:..::.xx..x....:......-:x.:x...:x....x.-...x..:..:.:::.....:x...--..:...-.....x..x.xxx:.....:.xx.---.x.....-------:.:::xx.....:..x.xx...:..:::.::xxxx...xx..:.x..x.:.:.....:. 46M3I16M6D9M1D17M16D34M7I8M4D156M1D34M5I45M1D16M1D24M2I6M1I24M3I7M7I59M 331/501 66.1% 529/94230402 0.0% 58/501 11.6% 102116677 88097878 +3062 chr4 + 190214555 169978445 169978444 169978515 71 TTTCTTTTCTTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTGAGATAAAGTCTCGCTCTGTTGTCCAG chr4 - 94230402 52825908 52825907 52825978 41404425 41404424 41404495 71 TTTTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTTATGACAAGCTTTAGCTTTATTCTACGG ...:.:.x.:...:.....x..:.....x.......:...x...:x..:..:x.:.x...:.:..x.x.:. 71M 49/71 69.0% 71/94230402 0.0% 0/71 0.0% 117152537 73062018 +3098 chr4 + 190214555 169978453 169978452 169978498 46 CTTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTGAGATAAAGT chr4 - 94230402 83476878 83476877 83476923 10753480 10753479 10753525 46 CTTTTTTTCTTTTTCCTTTTCCTTTTCCTTTTCTGTGGTATAAAGT ..............:......:....::....:.x..:x....... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 86501575 NA +47541 chr4 + 190214555 169991275 169991274 169992330 1056 ATGAGAGTCTCCTGGTAAGGCTTAGCGGCAAGTGCGTACTACATCTGTATTACAAGGAGCAGCCCCTGATTTTCTTGATATGCATAGCTTTTCGGGGTTGGTATTAGACATGGCTTTCGTAAATAATGCAGGTGTTTTTGTCATGTGTCACTGCTGGCTCTGTGGCTTCCAGGTAAGCTGGCGGCAGTACCTTATCTGGTACCTCAACAGGTGTTGGCTCTTCAGATGTTAGCTCGGTGGACGTGACATCGGTAGAAGGTTCTGCAGTTTCGGGGGAATGTTCCGCCGACAGTTCTGTCTCCT---------CTACATCTTTGACTTCAAACTGTCCACCCTCTTG------GTCATCTGCATGCTCTTTTTTGGACTGCGGGTGAACTGACACCTTGATGGCAATTTGCTGAGGTTGCTCGTGCAGCGATGAGGCGTCCGAGTCAGCGGCAGGGGAGTCGCTCCGCTTCAGAGAGTTGGGGATTGTGTAGACCTCATCCCTGTCTGCGGCCTCCTGGCCCTCTGGAGTATGCCTCACAAAATTCTGCCCCTGCTCCTCCAGCCCAACCACCTCCATAATCTCCTCCATGATAGTCCTGCAGTTCATAATGAGAGGCGGCAGAGGCACGCTCCTGGCAAGCTCTTCGATGTAGCGGGCGAACTCCATGGTTTTGAACTGGGTGACTTTGGCAAGCTCTAGAGTTTTGGCGGAGGTGATGATGGGGATGCGCTTGGCGATCTCAAATGCCTTCTGCAGCTTCTCTGCACCTTCGGTCCTAAAGAACTCATTGATGGCCTTCTCAGTCTTCTTTAGATGGCTGCTCATCATGCACAGGCGGGTGATATTGAGGACCATGACGATGGTGAAGGCCACCAGGCACACGACCATGTAGTAGACACCCATGTCTCCAGAAGTGAAGATGACGCGCAAGGTCACCGTGTTGTTCACGGTGCCGTAGATGTTAGAAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTGATGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCTGTCGGAAGGGAGAGAAGAG chr4 - 94230402 67866837 67866836 67867812 26362591 26362590 26363566 976 ATGATAGTCTCCTGGTAAGGCTTAGCGGCAAGT----ACAATATGTATTTTTAAAAGAGCTCCACCTGATTTTCCTGCTATGCATAGATTC-AGGAGTAACTATCATACATGGCTTTCATATATAACACATGTGT------CATTTGCCAGTGCTG----------------------TGTCATCAGAAC-----------------------------------------------------TGAGTTCAGTAGAAGGCTC---------AGGAGAGGGCTCTGTTGGAAGTGCTGGTGTTTGAGGAAGGTCTTCTTCCTTGGTGTCCAACTGCACGCTTTCTTGTGACTGACCATCCATGCAGTCCTTTTTGGACAGTGGGTGAACTGACACTTTTATTGCAATCTGTTGAGGTGGCTCATGCAGTGATGATGCATCAGAGTCAGCTGTGGGAGAGTCACTGCGCTTCAAAGCATTGGGGATCGTATAGAGCTCATCTGTTTCAGTGGTTTCCTGGCCTTCTGCTGTCTGCCGTACAAAATTCTGTCCTTGCTCCTCCAGACCAACAACCTCCATAATTTCTTCCATTATAGTCCTGCAGTTCATGATGAGAGGTGGCAAAGGCACACTCCGAGCAAGCTCTTCGATATAGCGAGCAAATTCCATGGTCTTGAACTGCGTTACTTTGGCAAGCTCGAGCGTTTTGGCTGAAGTGATAATTGGGATACGTTTTGCAATCTCAAAGGCTTTCTGGAGTTTCTCTGCTCCTTCTGTTCTGAAGAATTCATTGATTGCTTTCTCCGTTTTCTTCAGGTGACTGCTCATCATACATAACCGTGTAATGTTCAATATCATAACAATGGTGAAAGCTACAAGGCAGACAATCATGTAATAGATTCCCATATCTCCGGAAGTAAAGACCACCCTCAGAGTCACAGTATTGTTAACACTGCCATACATATTAGATGCGACACACGTGTATTTACCTCTGTCTTCAAAAGACACGCTGGTAATGTTTAGTAGCCCATTTTCAAGAAACCACCATTTTCCTGCTGTAAAGGAGAACAGAG ....x............................----..x.:..x.:.x..xx..:....xx.x..........:..x.........x..:-x..:..x:x...:.x...........:..x....::..x....------...x..:..x.....----------------------..x.:x...x..-----------------------------------------------------...xx..:........:..---------:..:..:x.:..:.::.:x...x...x:x::.---------..x.x..:...::x..x.....:x.:.::.....------::....::::::x..:.........x.:..............:..x..x.....:..:......x....:.....:.....x..:..x........x.::..:.....:..x.......:..x:........:..:....x......:x.x..x.:..::........:....xx..x....x:...........:..:...........x.....x...........:..:.....x.................:........:....:......:....x:..............:.....:..:..:........:........x..x..............x..x........x..:.....:..x.....:..:..x..:........x..:.....x..:........x.....x..:..:.....:........x..:.....x..:.....:..:..:...........:..:.:x..x..:..:..x.:x.:...:..:........:..:..x.....x..:.:......:....:x.....:.....:.....:....:x..x.x..::.....x..:.....x..:x....:..x..:.....x..x...................x....xx:..:..:..x:....:.....:..x..x..::.x..:x.x.x:::...........::.x..:.....:x.... 33M4D54M1D43M6D15M22D12M53D19M9D32M9I34M6I719M 731/961 76.1% 976/94230402 0.0% 110/961 11.4% 102124438 88090117 +13131 chr4 + 190214555 170005589 170005588 170005891 303 TCTCCTTCTCATCCTCTTCTTCTTTCAGCAGCTTGCCAATGGAATTATACCACTTGAACTGTGGGTCAGGGATGCCATAAACACTACAGTTAATCAAGGCACTGTTCCCTTCCTTGACTATGATATGGTCAGTTCTGGCAATGATTACGGGCACAGAGCCCAAGACCACGTTAGTGCCATTTAAAGTGCTGTTAGTCACACTCTTAGCGGTGGCTAGAGTGGATACTAGGATTAAAAAGGGCACAGAAGGTAGAAAGCACACAGTCAGATGGCTCTTCAATCGATCCATCTTCTTTGCTTGCT chr4 - 94230402 67870447 67870446 67870749 26359654 26359653 26359956 303 TCTTACCTTTATTCTCTTCCTCTTGGAGCAGGCGGCCGTTGGAATTGTACCATCTGTAATGTGGGCTAGGACTACCTTGGACATTGCAGTCAATCAAGGCACTACACCCCTCCTTGACTATGATATGGTCGATGTGGGAGATGACCACAGGCACAGATCCCGTGTTTGTGCCAGTGCGGTTGAAAGTGCTATTAGTCACATCCTCAGCAGTTGTCAGAGCTGCTAGTAAGATGACAAGGCGTATGGTAGGCAGAAAGCACAAAAAGTGGTGGCGGTTCAGTATGTTCATTTTCCTTCAGTGCT ...:x:::.:..:......:....xx.....x:x...:x.......:.....::..x.x......::...:x.:..x.::...:.:....:............::x...:....................::.x:x..x:....::..:........x...:x.x::::.::.....x:..x........:.........::..:...:..x.::....:x.x..x..:...x.x..:.x.:.::.x...:..........x.:xxx.:....xx....:.xx:.:...:...:..xxx.... 303M 205/303 67.7% 303/94230402 0.0% 0/303 0.0% 102135142 88079413 +3222 chr4 + 190214555 170042888 170042887 170042970 83 CTACAATCTCTGCCTCCCGGGTTCAAGCAATGTTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGCTGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....::.:xx:x..:.:.........::x.x:x.xx.x.........:...........:.:....--:.::......::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 151845762 38368793 +3344 chr4 + 190214555 170050825 170050824 170050907 83 CTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGTTGGAATTACAGGCATGTGCCACAATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.::........::x...x.xx.x........::.......:.....:....--.:..::....x:.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 151853699 38360856 +3261 chr4 + 190214555 170056408 170056407 170056476 69 AGTCTGTCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 24170071 24170070 24170138 70060265 70060264 70060332 68 AGCCTGT-TAAAAAAGAAAAAAAAAGGATTGTTTTAATATAAGTAAATGTACACATACACACACATACA ..:....-.x.....:.........::.x.:.x.xx.....x:..x..:......:.........:... 7M1D61M 52/68 76.5% 68/94230402 0.0% 1/68 1.5% 145886337 44328218 +3106 chr4 + 190214555 170056414 170056413 170056457 44 TCTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437734 69437733 69437777 24792626 24792625 24792669 44 TTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT .:.::.........x........:x................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 100618680 89595875 +3571 chr4 + 190214555 170056415 170056414 170056501 87 CTCAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACACACGCACA-TATATGTGAAAATTT chr4 - 94230402 64433192 64433191 64433279 29797124 29797123 29797211 88 CTCAACGTAGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGCCATGTGCAGAAATTT .....x:x.:.....:x......x.x.x.:.:.:.........x:.....:......:..:..::.:.:.::-:..:..:::...... 72M1I15M 59/87 67.8% 88/94230402 0.0% 1/87 1.1% 105623223 84591332 +3115 chr4 + 190214555 170056417 170056416 170056470 54 CAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACA chr4 - 94230402 70707586 70707585 70707639 23522764 23522763 23522817 54 CAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:.....x.::....::..................:.:.:....::..x.x.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 99348831 90865724 +3037 chr4 + 190214555 170056418 170056417 170056481 64 AAAAAAAAAAAAAAAAAAATATA---TATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 60979343 60979342 60979409 33250994 33250993 33251060 67 AAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAAC ......x..x.....x...:.x.---.x........:.:.....:.............x.x.x.x.. 23M3I41M 51/64 79.7% 67/94230402 0.0% 3/64 4.7% 109077075 81137480 +3147 chr4 + 190214555 170056419 170056418 170056476 58 AAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707582 70707581 70707639 23522764 23522763 23522821 58 AAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ....x.:.....x.::..x.x:x..........................::..x.x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 99348837 90865718 +5772 chr4 + 190214555 170061885 170061884 170061996 112 CACTCACCACATCCATCTGTTCTGGAGAAGCTGAAGAGAAGGATGCTCTCAAGTAAGGGCTAGGAGCTGAGCTATCGACGTAGAAAGCATTTCCAGGGAGCATTAATACCTA chr4 - 94230402 67909597 67909596 67909708 26320695 26320694 26320806 112 CACTTACCAGATCCATCTGGGCTGGAGAAGGCAGAGAGAAAGAAGCTCTGACATAAGGACTGGGCTCTGAACTATCGATGTTGAACACTCCTCCAGGAACCAGTAACACCTA ....:....x.........xx.........x:::......:..x.....x.x:.....:..:..xx....:.......:..x...x:.x::......:.x..x...:..... 112M 83/112 74.1% 112/94230402 0.0% 0/112 0.0% 102152288 88062267 +6369 chr4 + 190214555 170064696 170064695 170064849 154 AGCCCTTCACCTCCCAGTTTTACCCCCATCTTAACGGCCTTTTCTTCAATCAGTTCTTTTACATCATTAATGCCTTTAACTTTAATCCATAAAAACATTCCAGCAGCAGGAACATGCCATTCTGCCAAACCTACA-AACAAAAGAAGAGAATAAA chr4 - 94230402 67910344 67910343 67910498 26319905 26319904 26320059 155 AGCCATTAAGCCACAGGTCATACTTCTTTTTGCAAAGCTTTTTCCATGATCAGCTGCTGTGTATCAGAAACTCCCTTAATTTTGATCCATAAGAACATGCCAGCAGCAGGAGGATGCCATTCTGCCAAGCCTAGAGAAAAAGAAAAGGGAATCAA ....x..x.x.:x.x:..:x...::.:x.:.xx.x:..:.....:x::.....:.x:.x.::....xx..:x..:....:...:........:.....x............:x...............:....x.-..x..:.:...:....x.. 135M1I19M 107/154 69.5% 155/94230402 0.0% 1/154 0.6% 102154352 88060203 +4513 chr4 + 190214555 170067324 170067323 170067413 90 TACCTGTCTACATGAGCCATGAAACCTTCTTCTCCCCATTCGTGTAGAAGCTGTGATATCATGAGCTAAAAGAGATAAAAT----CATAAATAC chr4 - 94230402 67915185 67915184 67915277 26315126 26315125 26315218 93 TACCTGTCTGTGTGCTCCAAGAAACCCTTTTCTCCCCACTGTTGAAGAAGCTGTGATATTATCATCT-AAAGAAATAAAATACACCATCAATAC .........:::..xx...x......:.:.........:.xx..x..............:..x.x..-.....:.......----...x..... 67M1D13M4I9M 72/89 80.9% 93/94230402 0.0% 5/89 5.6% 102152139 88062416 +6689 chr4 + 190214555 170068583 170068582 170068714 132 GTCCTTACCTGGTTAAAAGTGCTGGGGTGCAATGTTGAAACTTGTATGTGTAAAATAACTCTCTCTATTAAGGGTTTTGGACCAGTTAAAAATCCTATTCTCAACCTACGTGGAAAGAGAAAAGGCACGATA chr4 - 94230402 67916055 67916054 67916186 26314217 26314216 26314348 132 GTACTTGCCTGTGTGAAAGTGCTGGTGTGCATTGTAGAAACCTGAATGTGTAGAATAACTCTGTCGATGAGAGGCTTGGGGCCTGTCAGAAAACCTACTCTCAACCTAGAAGAAAAAGGGAAAGTTACAACA ..x...:....xx.:..........x.....x...x.....:..x.......:.........x..x..x.::..:..x..:..x..:.:...x....:..........x:x.:...::.:....x:..:.:. 132M 97/132 73.5% 132/94230402 0.0% 0/132 0.0% 102152528 88062027 +6341 chr4 + 190214555 170070583 170070582 170070673 91 TTACCTTGTTAAACTGGAGAAAATAGTAAGGATCATCTTCTATTATGAGGAAATCATATTTTCTTGCAAGCTAAAAAAGGTTGAAGTAATT chr4 - 94230402 67918540 67918539 67918628 26311775 26311774 26311863 89 TTACCTTTTCAAACTGAAGAAAGTAGTAAGGATCATCTTCTATTATAAGGAAATCATATTTTCTTGCAATCTAAAGAAAG--AAATTAATT .......x.:......:.....:.......................:......................x.....:..:.--:..x..... 80M2D9M 79/89 88.8% 89/94230402 0.0% 2/89 2.2% 102152043 88062512 +3225 chr4 + 190214555 170072221 170072220 170072322 102 GTATGTGTGTGTGTGTATACGTGTGTTTATATAGATACATGTATATATATGTGTGTGTGTGTATATATATGTGTGTGTGTATATATATATATATATTTAGAG chr4 - 94230402 35554922 35554921 35555020 58675383 58675382 58675481 99 GTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGC---TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAG ......x.x.x...x.x...:xx.x.xx:.....::---.:x......x..x.........:.:....:x....:.:.:...::...:.x.x..:.x..... 36M3D63M 67/99 67.7% 99/94230402 0.0% 3/99 3.0% 134517299 55697256 +3076 chr4 + 190214555 170072246 170072245 170072292 47 TTTATATAGATACATGTATATATATGTGTGTGTGTGTATATATATGT chr4 - 94230402 75495552 75495551 75495598 18734805 18734804 18734851 47 TTCAAATGAATACATGTATACATATGTGTGTGTGTGTACATGTCTAT ..:.x..::...........:.................:..:.x.:. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 94576694 NA +4267 chr4 + 190214555 170078502 170078501 170078585 84 TACTCACACTTTGAAGAGTTCCTGAATAAGCAGGTTCATCTAGGAGGACATTATCTCCAGGATTAATGATCATTTCAAACACCT chr4 - 94230402 67920106 67920105 67920189 26310214 26310213 26310297 84 TACTTACAGCTGCGAGTGTCCCAGAATATGTGGGGGCATCCAAAAGGATGCTGTCCCCAGGATTAATGAGCATTTCAAACACCT ....:...x:.xx:..x..:..x.....x.::..xx....:.::....:::.:..:.............x.............. 84M 61/84 72.6% 84/94230402 0.0% 0/84 0.0% 102158396 88056159 +7037 chr4 + 190214555 170087104 170087103 170087260 157 TTTCAGTCTTACCTTACAAAGACCTTGTTGGCTGCCAGATGTGACACATAGATCCATTTGTCCTTGACTGGGTGGGTAATGGATGGTAGGAGGATTATGCAATTTTATTTGTAACTGTTTTAGCCAGGACAAAAGCTCTGGAATTCTAAAGCAAAAA chr4 - 94230402 67920736 67920735 67920892 26309511 26309510 26309667 157 TCTTGGTCCTACTTTGCACAAGCCTTCCTGGCTGCCGGTTGTGACACACACTTCCATTTGTCCTTGCTCGGGACTGTAGTTGGCTGTGGGGGGATTGTGTAGATTCCTCTGAAAATTCTTTAGCCACGACAACAGTTCTGGAATCCTGAAAGAGGAA .:.::...:...:..:..x.::....x:........:.x.........:.xx..............x::...xxx...:.x.::x..:..:.....:..:.:x..:x.:..x..x.x:........x.....x..:........:..:..:x.::.. 157M 108/157 68.8% 157/94230402 0.0% 0/157 0.0% 102166368 88048187 +3646 chr4 + 190214555 170089619 170089618 170089714 96 CTCACTCATGGTCCGGATGGGAGAAGGGTTTCTGGCTGCGCTCGCTGCCGTGATGAACCGTGCGTAATTCATGTCTTCTGA-----------CAGCCAAGCATCAAG chr4 - 94230402 67922822 67922821 67922928 26307475 26307474 26307581 107 CTCACTCAGAACTCTTATTGGAGATGCTTTTCTGGCTGCACTCACACTTGTGATAAACCGGGAATAATTCATGTCTGTGGGGAAAGAGCAATTAGTTGAGCATCAAG ........x::::.xx..x.....x.xx...........:...:.xx::.....:.....x.x:............x:x.:-----------:..:::......... 81M11I15M 67/96 69.8% 107/94230402 0.0% 11/96 11.5% 102166797 88047758 +3289 chr4 + 190214555 170219651 170219650 170219827 177 CCTCCCTGTAATACCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGT-GGAGGTTGTGGTGAGCTGAGATCCTGCCATTGCACTCTAGCCTGGGCAATAAGAGCAAAACTCCATCTCAAAAACAAACAAACAAACAAACAAAAAAAACCCACAAAAAACTGTA chr4 - 94230402 68812117 68812116 68812267 25418136 25418135 25418286 151 CCTCACTGCAA--------ACTTGGAGGTCTA------GAAAATTTCCAGTCCCTAGAAAGCAGGAATTTGCGGCCAG----GTTCTTGTCATTAGCAGTTCCTATGGG----AAAACCAAAATGCTA-----AAAAAAAACAAACAAACAAACAAAAAAAACACCCCAAAAACCCTA ....x...:..--------...:..::.x..:------..:....x.:x.xx..:..:...:-...:x...:..:x..----.x..:..:....:xxxx:.xx:x....----..:.x.....:x.:.-----....x.........................x.x.x......:x.. 11M8D13M6D24M1I15M4D27M4D15M5D45M 105/150 70.0% 151/94230402 0.0% 28/150 18.7% 101407534 88807021 +3056 chr4 + 190214555 170219766 170219765 170219817 52 AGCAAAACTCCATCTCAAAAACAAACAAACAAACAAACAAAAAAAACCCACA chr4 - 94230402 27965033 27965032 27965082 66265321 66265320 66265370 50 AGCAAA--CTCACTTCAAGAACAAACAAACAAACGAAAACAAAAAACCCACA ......--::..::....:...............:..x.x............ 6M2D44M 42/50 84.0% 50/94230402 0.0% 2/50 4.0% 142254733 47959822 +3080 chr4 + 190214555 170219777 170219776 170219815 39 ATCTCAAAAACAAACAAACAAACAAACAAAAAAAACCCA chr4 - 94230402 64540518 64540517 64540556 29689847 29689846 29689885 39 ATTTAAAAAACAAACAAACAAACAAAAAAAAAAAACCCA ..:.x.....................x............ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 105679259 84535296 +3359 chr4 + 190214555 170219777 170219776 170219835 59 ATCTCAAAAACAAACAAACAAACAAACAAAAAAAACCCACAAAAAACTGTAAGATGTTT chr4 - 94230402 45586832 45586831 45586890 48643513 48643512 48643571 59 ATCACAGCAAAAAACAAACAAACAAACAAAAAAAACACCCAAAAAAGTGGAATAGGCTT ...x..:x..x.........................x.x.......x..x..x.x.:.. 59M 48/59 81.4% 59/94230402 0.0% 0/59 0.0% 124632945 65581610 +3127 chr4 + 190214555 170237756 170237755 170237802 47 TAATAATAATAAAATTAAAAAAACAAACAAACAACAACAACAAAAAA chr4 - 94230402 27977573 27977572 27977619 66252784 66252783 66252830 47 TAATAGAAACCAGATTTACAAAACAAACAAACAACAACAACAAAAAA .....:x..:x.:...x.x............................ 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 142260183 47954372 +3086 chr4 + 190214555 170237767 170237766 170237802 36 AAATTAAAAAAACAAACAAACAACAACAACAAAAAA chr4 - 94230402 72680389 72680388 72680424 21549979 21549978 21550014 36 AGGTTAAAAAAACAAACAAACAACAACAACAAAAAA .::................................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 97557378 92657177 +3023 chr4 + 190214555 170273360 170273359 170273398 39 AAAAAAAAAAAAATCAAAACCAAAACCAAAAAACAAAAA chr4 - 94230402 60804066 60804065 60804104 33426299 33426298 33426337 39 AAAAAAAAAAAAGCTAAAACCAAAACCAACAAACAAAAA ............:::..............x......... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 109469294 80745261 +3013 chr4 + 190214555 170277959 170277958 170278025 67 CTGTTTCATTCCTTTTCTTTTCTTTTTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTGTTTTGTTTTG chr4 - 94230402 2453080 2453079 2453146 91777257 91777256 91777323 67 CTTTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTTGTTTTG ..x..::...::...:..:.:..::..::.x::.:..:::.x:......:...x............. 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 167824879 22389676 +3519 chr4 + 190214555 170278082 170278081 170278164 83 CTGCAACCTCCGCCTCCCAGGTTTAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTATCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::....:...:.x...x..x.x........::...........:.:....--.:..:.:...::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 152080956 38133599 +3327 chr4 + 190214555 170327528 170327527 170327573 46 AAAAAAGAAAGGGAAAGGGAAAGGAAAGGAAAAAGGAAAAAAAGAC chr4 - 94230402 43002945 43002944 43002990 51227413 51227412 51227458 46 AAAAGAAAAAAGGAAAGGGAAGGGAAAGGGAAAGGGAAAAGAGGAC ....:.:...:..........:.......:...:......:.:... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 127324583 62889972 +3016 chr4 + 190214555 170338350 170338349 170338440 91 AGAGCAAAACTCTGTCAAAAAAAAAAAAAAGAAAAAGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAATATA chr4 - 94230402 32280598 32280597 32280680 61949723 61949722 61949805 83 AAAGTAAAAGTCCACTAAAAAAAAAAAA--------GAAAGAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCATA .:..:....x..::::............--------............::...x.xx::.:.:.:x...:.x.:.:x.x.....:.::... 28M8D55M 56/83 67.5% 83/94230402 0.0% 8/83 9.6% 138057752 52156803 +3139 chr4 + 190214555 170346417 170346416 170346456 40 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.x...............::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 151364102 38850453 +3102 chr4 + 190214555 170346419 170346418 170346454 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 88717355 NA +3353 chr4 + 190214555 170346419 170346418 170346458 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x.................::.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 151364104 38850451 +3316 chr4 + 190214555 170346421 170346420 170346456 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 88717357 NA +3627 chr4 + 190214555 170346421 170346420 170346462 42 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ....................................::..:. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 151364106 38850449 +3102 chr4 + 190214555 170346423 170346422 170346458 36 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.....x................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 88717359 NA +3282 chr4 + 190214555 170346423 170346422 170346464 42 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ................x...................::.::. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 151364108 38850447 +3187 chr4 + 190214555 170346425 170346424 170346467 43 TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAACAT chr4 - 94230402 18982315 18982314 18982357 75248046 75248045 75248088 43 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT ..............x.x...................:..:x.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 151364110 38850445 +3441 chr4 + 190214555 170372032 170372031 170372141 110 CCAGGCTGGAGAGCAGTGGCTATTCACAGGTGTGATCGGCACA-----CTATGACCTGGAACTCCTGGCCTCAAGTGACCCTCCTGCCTCAGCCTCTCAAGCAGCTGGGACTACA chr4 - 94230402 18197079 18197078 18197192 76033211 76033210 76033324 114 CCATGCTGG-GAGCAGGCTTAGGGCACACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ...x.....-......xxx:x:xx....x:.x..x.:....:x-----...:::..:::.:..:....x:.......x::.x.xx.x........:.....:......:...... 9M1D33M5I67M 73/109 67.0% 114/94230402 0.0% 6/109 5.5% 152174953 38039602 +3152 chr4 + 190214555 170401716 170401715 170401828 113 TATTATTATGTCCATTTTACAAATGAGAAAATGGTTTTAGAAGTGACTTGGCAATTGTCTATTCATGTCCTTAGCCCATTTTTTGATGGGATTGTTTTTTTTTTTTTTCTTTT chr4 - 94230402 37239085 37239084 37239197 56991206 56991205 56991318 113 TATTATTATGTGCTTTCAAGAAAAAAATAAAAGTTCAAGAAAGAGATTTTTTACATGTTTCTTTTCTTCCTAAGACTGTGTTTTAATGGCATTATGTTTTCTCTGTTTCTTCT ...........x.x..:x.x...x:.:x...x.x.:xx::...x..:..xx:.xx...:.x..:x:x....x..x.::.x....:....x...:.x....:.:.x......:. 113M 71/113 62.8% 113/94230402 0.0% 0/113 0.0% 133162631 57051924 +3134 chr4 + 190214555 170401812 170401811 170401891 80 TTTTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGATATGGAGTTTTGCTCTTGTTTCCCAGGCTGGAGTGC chr4 - 94230402 13027554 13027553 13027633 81202770 81202769 81202849 80 TTTTTTTTTTTTTTTTTCCTCTCTTCTGCTTCTCCTTTGTTTATTAAATGATTTTTATCTTGACCCCCAGCTTGACTTGC ............:.....:.:....:.x:..:.::...x...:x..x:x::....xx.....x::.....x:..:xx... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 157374258 32840297 +3698 chr4 + 190214555 170403937 170403936 170404008 72 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATATATGA chr4 - 94230402 8395796 8395795 8395867 85834536 85834535 85834607 72 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGA ..:.:.::...x.:..:...x..:....:...::x..:..xx...................x...:.x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 162008141 28206414 +3148 chr4 + 190214555 170403938 170403937 170404012 75 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATATATGATAGA chr4 - 94230402 8395801 8395800 8395875 85834528 85834527 85834602 75 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA .::...x.:..:...x..:....:...::x..:..xx...:.:.............x...:.x..:x..:.x.:. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 162008137 28206418 +3214 chr4 + 190214555 170403938 170403937 170404016 79 TATATATATATATATATATATATATATATATATATATATATATACACACACACACACACATACATATATGATAGAATAC chr4 - 94230402 8395799 8395798 8395876 85834527 85834526 85834604 78 TGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG-AATAAAAAAC .:.::...x.:..:...x..:....:...::x..:..xx...:...............x.:...x..:-:...:..x.. 68M1D10M 55/78 70.5% 78/94230402 0.0% 1/78 1.3% 162008139 28206416 +3251 chr4 + 190214555 170403946 170403945 170404006 61 TATATATATATATATATATATATATATATATATATACACACACACACACACATACATATAT chr4 - 94230402 88147180 88147179 88147237 6083166 6083165 6083223 58 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC---CATATAT ..:..:..x:x..............:.x.:.:...:.:.............---....... 51M3D7M 47/58 81.0% 58/94230402 0.0% 3/58 5.2% 82256766 NA +3213 chr4 + 190214555 170406313 170406312 170406391 79 AAAGTCTTTTCACTATATATATATATACACACATATATATATATATATATACACATATATATATACACACATATATATA chr4 - 94230402 17520733 17520732 17520811 76709592 76709591 76709670 79 AAAATGCATTCAGTCAACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...:.x:x....x.xx.:.x.......x.....x...:.:...:..:.:x.::.x.:....x.:...::.......... 79M 54/79 68.4% 79/94230402 0.0% 0/79 0.0% 152885580 37328975 +3060 chr4 + 190214555 170406325 170406324 170406367 43 CTATATATATATATACACACATATATATATATATATATACACA chr4 - 94230402 45271686 45271685 45271728 48958675 48958674 48958717 43 CCATATCTATATATACACACATATATATGTATACAAACACACA .:....x.....................:....:.x.:..... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 125134639 65079916 +3012 chr4 + 190214555 170406351 170406350 170406418 68 ATATATATATATACACATATATATATACACACATATATATATACACACACATATATATATACACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x..::.....x..:......:....:...:....:.x...:.:..x..:::.:::..:.x:.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 162809938 27404617 +3168 chr4 + 190214555 170406369 170406368 170406430 62 ATATATATACACACATATATATATACACACACATATATATATACACATATATATATATACAC chr4 - 94230402 7596413 7596412 7596474 86633929 86633928 86633990 62 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCAC ...:.x..:..:...x..:...........:...:....:.x...:...:x..:::.::... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 162809956 27404599 +3191 chr4 + 190214555 170406373 170406372 170406442 70 ATATACACACATATATATATACACACACATATATATATACACATATATATATATACACATATATATATAT chr4 - 94230402 89016082 89016081 89016151 5214252 5214251 5214321 70 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGT ..:.:.......x.::..::........:.x.::::.:......::.x..::......:..x..:.:.:. 70M 46/70 65.7% 70/94230402 0.0% 0/70 0.0% 81390291 NA +3383 chr4 + 190214555 170452904 170452903 170452969 66 CTCCCGGGTTCAAGTGATTTTCCTTTCTCAGCCTCTCAAGTAGCTGGGATTACAGGCATACACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.:...........x..:x.xxxx........:............:.:....--.:.:...... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 152255765 37958790 +3300 chr4 + 190214555 170464097 170464096 170464162 66 AGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAATATATATATATAT chr4 - 94230402 47152891 47152890 47152959 47077444 47077443 47077512 69 AGAGGGACACACTACCAAAAAAAAAAAAAAAAAACCAGAAATGCAAAGCAAAAAAATATATGTATATAT ..x.:...x.xx.x:...................xx.:...---...:x............:....... 41M3I25M 53/66 80.3% 69/94230402 0.0% 3/66 4.5% 123311206 66903349 +3247 chr4 + 190214555 170464107 170464106 170464177 71 CGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATG chr4 - 94230402 86407063 86407062 86407133 7823270 7823269 7823340 71 CACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATG .:::.....:x..............:..x...:..xxxx..:..x.x:.:.x......:.:.......... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 84057044 NA +4134 chr4 + 190214555 170469525 170469524 170469698 174 GAATTTCCTTTCTTTCTCCGTC---CCTCCCTTTGTCCC---TCCCTCCCATTTTCCTTCCTTCCTCCCTCCCTCTCTCCTTCCTCCCTCCCTCCCTCTTTCCTTCCTCCCTCC---CTTCTGCCCTCCCTCTCC---TTCCCTCCCTCTCTCTCCT---------TCCCTTCCTTCCTCCCTCCCTCCCTCCCT chr4 - 94230402 61964738 61964737 61964917 32265486 32265485 32265665 180 GGATCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTC-CTCTCCT--------------CTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT .:..:......:.:...x:x..---:.xx.:x:..x..:---..:..x::..........:.:........:.-.......--------------......:......:..x.:---.x.x::::....:..:..---:....:.....x.x.....---------...::...x.x......x.x....:..:. 22M3I14M3I31M1D7M14D19M3I18M3I19M9I29M 113/159 71.1% 180/94230402 0.0% 36/159 22.6% 108504787 81709768 +3748 chr4 + 190214555 170469594 170469593 170469698 105 TCTCCTTCCTCCCTCCCTC--------------CCTCTTTCCTTCCTCCCTCCCTTCTGCCCTCCCTCTCCTTCCCTCCCTCTCTCTCCTTCC------CTTCCTTCCTCCCTCC-----CTCCCTCCCT chr4 - 94230402 61964741 61964740 61964870 32265533 32265532 32265662 130 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCT .......::..:..x::..--------------...x....::.x:.x::.:......x.............::....:..:.:::.......------.x.x.x.:....:...-----.....:.... 19M14I60M6I16M5I10M 76/105 72.4% 130/94230402 0.0% 25/105 23.8% 108504853 81709702 +3308 chr4 + 190214555 170469609 170469608 170469701 93 CCTCCCTCTTTCCTTCCTCCCTCCCTTCTG--------CCCTCCCTCTCCTTCCCTCCCTCTCTCTCCTTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTCT chr4 - 94230402 83437660 83437659 83437760 10792643 10792642 10792743 101 CCTTGTCCTGTCTCACCCCTCTCCTTTAAGAAATGAACCCCTCCTTCAGCTGCTCTCCCTGCTTCTCCTCCCCGCCCTTCCTGCCCTCATCCCTCACTGCT ...:x::..x..::x..:.:....:..xx.--------......:..xx..x.:......x::......:...x:.......x..::.x......x..x.. 30M8I63M 63/93 67.7% 101/94230402 0.0% 8/93 8.6% 87031949 NA +3066 chr4 + 190214555 170476044 170476043 170476103 60 AAAAAAAAAAAAAAAAAAAAGAAAGGACAATATTTAGTAGGCTAAATTAAAAAAAAAATC chr4 - 94230402 21725675 21725674 21725734 72504669 72504668 72504728 60 AAAAAAAAAGAAAAAAAAAATAGAGGAAAATATTTAATACAGTGAAAATAAAAAGACATC .........:..........x.:....x........:..x:x.:..xxx.....:.x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 148750369 41464186 +8131 chr4 + 190214555 170477606 170477605 170477891 286 TTTCCCTGTACTGAGAAAGGAAGTTAAATTGCGTCCACAGTAATAGGCTGAAGAAAAGATCTGGAACTGACCTTTAAAAGCAGACTACAAAATATTTCAATTAGTTTCTAATGTCACCAAAGCAACAAACATTTTGCACTGAATTATGTAAGATGACAACTCATTAACA----GTTGACTGCTTGAATCAATGGCAATAATTTCCACTCTATTTTTGTATAAACTAATTGTGAGTGATTATAAAATCTATAATGAGTTTGAGAGTAAGGTTGGCTAAAAGTTATTTCTCA chr4 - 94230402 50433898 50433897 50434175 43796228 43796227 43796505 278 TTGCACTGTTTCAGAAAATGATGTCAAATTATATACAATG-AATGAATTAGACAAGAGAGA-AAAGCTGACCTTTAATTGTGACCTTTAAATTGTTTCAATTCTTTCCTAATGTCAACAAACCAGTAA----------TTGAACTATACTAAATGACATTGCCTTAACACCCAGTTAACAGCTTGCATCGACAACCATAAATTTAGCTCTATCTTTTTATCAGATAATTAGTGGCAACTATAAGACCTGTAGCAGGCTTCACATTAAGTTTGGCTTAAAATTATTTCTTA ..x.x....x:::::...x..x..:.....:::.x..xx.-...::::.::.x..:...xx-::.:...........xx.:::x..x:...x.:........xx..:.........x....x..::..----------:....:...::x.:......x:x.x......----...:..x.....x...:.:::.x....x..:x:......:...x...x.:x.....:xx:.::.:.....:.:..:..::::.:..x.x.x....x......x...:........:. 40M1D20M1D66M10D31M4I117M 178/274 65.0% 278/94230402 0.0% 16/274 5.8% 120043708 70170847 +3389 chr4 + 190214555 170516534 170516533 170516653 120 AAACTTAAAAACTGACACATGAAAAATCTTAAAACTACCAAATCTGCTTTTGTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATA chr4 - 94230402 40224605 40224604 40224723 54005680 54005679 54005798 119 AAACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCA-ATATA ....x:.x.....::......x.x..xx:...x...xx:.x..x..:xx:.x.....::.xxx.x:::x:.x.x.............:...:......x:..:....:.:.x..-..... 114M1D5M 77/119 64.7% 119/94230402 0.0% 1/119 0.8% 130291929 59922626 +3430 chr4 + 190214555 170516571 170516570 170516691 121 CCAAATCTGCTTTTGTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATATATATATACATATATAT-------ATAT----------AGTGCATGAGGTTTATATAAAAGAGCTCTAATT chr4 - 94230402 57691379 57691378 57691516 36538887 36538886 36539024 138 CTATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTTAATATGAAGTTTGGAAATGCATCAAGTTAGAATGGAATAGTTTCAATT .:.x.:.....:.:..xx..::...::..:x.......:..:x.........:::.x....:x...x.....x.xx..x.::..-------....----------.:.....x.:...x:x..::..x..:.::.... 84M7I4M10I33M 80/121 66.1% 138/94230402 0.0% 17/121 14.0% 112825192 77389363 +3021 chr4 + 190214555 170516585 170516584 170516630 46 GTTTGTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 48089502 48089501 48089547 46140856 46140855 46140901 46 GTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ..:........:::........:....x.x........:.:..... 46M 37/46 80.4% 46/94230402 0.0% 0/46 0.0% 122427083 67787472 +3084 chr4 + 190214555 170516617 170516616 170516664 48 GTGTGTGTGTATATATGTATATATATATACATATATATATATAGTGCA chr4 - 94230402 65311256 65311255 65311303 28919100 28919099 28919147 48 GTGTGTATGCATATATTTATATATACACACATATATATGGACTGTGCA ......:..:......x........:.:..........:x.:x..... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 105205361 85009194 +3076 chr4 + 190214555 170522223 170522222 170522272 50 ATATATATACATATATACGTATATATGTGTGTGTATATATGTATATATAT chr4 - 94230402 61485373 61485372 61485422 32744981 32744980 32745030 50 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT .....:.......:.:..:.::.:.:x.........:.......x..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 109036850 81177705 +10249 chr4 + 190214555 170530798 170530797 170531017 220 CCTGATCTGCTTCATTCATTTCTTCCAATATTCATAACATCATTTACAGTTTCTGTTTTTAATTAGAGACATCTAATGATTAACACTAGCCAATTTGCCTCCAATTACCACCAGTGAAAAATTACAGGTGGATG-AAAGGCTGAGTAGAATTACTCACTCAGCAATGGATACCTGAGTAACTATAAGGATGAAACATTGAGTAGCCTCCAGAATCCAAGAT chr4 - 94230402 50420608 50420607 50420822 43809581 43809580 43809795 215 CCTGATCTGCTTCATT----TCTACCAATAATCATACCATTACCTACAGCTTCTGTTTTTAATTAATGGTATCTAATGATTAACACTGGCCAATTTGCATCCAATTATGTCTCCTGAAAAATTAAAAGTAGATGAAAAGGCTGAATGCAATTAATCATTCAGCAATATGCATTTGCTTAAATATCAAGAATGAATATGTTGTACTTTCTGAAAT--AAGAT ................----...x......x.....x...:.::.....:...............:x.::.................:..........x........:xx.:xx..........x.:..:....-.........:.:x.....x...:........:x::.::..xx...x...x.:..xx:..:..xxx...x::..:::...--..... 16M4D114M1I79M2D5M 163/214 76.2% 215/94230402 0.0% 7/214 3.3% 120110190 70104365 +3194 chr4 + 190214555 170545700 170545699 170545761 62 TCATTTCTTAAAATTCCAGAATTTGATGCTTTTGTTCTCAGGATGCAGAATAGCTTCTCCCT chr4 - 94230402 35062274 35062273 35062335 59168068 59168067 59168129 62 TTGTTTCCTACCACCCCAAAATTTAATGCTTTGTTCCCCAGAGTGCAGAATATGTTCTCCCT .::....:..xx.::...:.....:.......xx.:.:...::.........xx........ 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 135483426 54731129 +3049 chr4 + 190214555 170572907 170572906 170572994 88 TGTGTACATATGTATGTATACACATATATACATAGACATACATATATGTACATATATACACATACATAAGTATATATATATACATATA chr4 - 94230402 88029573 88029572 88029659 6200744 6200743 6200830 87 TGTGGACAGCTATATTTATGTGTGAAAATACACAAACATACATAAATACACATATATGCACAAAAAT-AGCATTAAAAAATTCACATA ....x...xx.:...x...:::::x.x.....:.:.........x..::........:....x.x..-..:..xx.x.x..x..:... 67M1D20M 60/87 69.0% 87/94230402 0.0% 1/87 1.1% 82543334 NA +4211 chr4 + 190214555 170576560 170576559 170576750 191 CCCTTCCATGTTGTATCTTTTATTATTCAGTTTTCATTTCCAATGGACTAGGTTTGAGCTCTGCCTTGAAATAATCTTGCAATTGTTATTGACTCCCTTTTGCAAAATTAA------TCTAATCTGTTTTTGGCCGACTTCCAGGGCAGCTATTTAAGCAGCTATTGGCCAGGTTTTATTGCCTCCTG----GCTTTAATT chr4 - 94230402 29422306 29422305 29422502 64807901 64807900 64808097 197 CCCTTATTCGTTGGATTTCCTCAAGTACATTTCTTATATCCAAGTGACTAGATTTCATCTCTGCTTTCAGCTCCTCTTTCACCTGCTGCTGGCTCC--TCTGCAGTGCTAGCACTGTTCTGATTTCTTTTTGAGATGTTTCCATGTCA--TGCTTCAGTTCCTTCTGTCCAGCTTCCATCGACTCCTGACAAGCTTTGACT .....x:x:....x..:.::.xxx:.x..x..:.:..x.....xx......:...x.x......:..x.:x.xx....x..x:..:.::..:....--.:....:x::..:------...:..:.x......:xxx::.....x.x..--.::..x..:xx..x:..x....x..::..:.x......----.....:.:. 96M2D13M6I31M2D38M4I9M 119/187 63.6% 197/94230402 0.0% 14/187 7.5% 141154254 49060301 +3202 chr4 + 190214555 170623507 170623506 170623563 57 ACCAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGTCATGCTGCTGATCTGACAC chr4 - 94230402 87676344 87676343 87676400 6554003 6554002 6554059 57 ACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTGTTTTGATAC ................:.................:x:.x.::xxx...x.:...:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 82947163 NA +3121 chr4 + 190214555 170623510 170623509 170623546 37 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATGTCA chr4 - 94230402 87676349 87676348 87676385 6554018 6554017 6554054 37 AAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACA .................................:x.. 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 82947161 NA +3079 chr4 + 190214555 170630697 170630696 170630753 57 TGCTTGATCAATTCTGCTGTTATGCTATTACATTTTTATTTCATTTATTGTATTTTT chr4 - 94230402 30428091 30428090 30428147 63802256 63802255 63802312 57 TGTATGATCAATCCTGCTGTTTTGCTGTTATACTCTTTTCTTGTTTATTGTGCATTT ..:x........:........x....:...:.:.:..x.:.::........::x... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 140202606 50011949 +3047 chr4 + 190214555 170637830 170637829 170637892 63 TTATTTTTCTTATAGTTTTTTTTGGCTTGTTTTGTTGCTATTATGCTGTTTCTTT---TTAATATA chr4 - 94230402 65707916 65707915 65707981 28522422 28522421 28522487 66 TTAATTTTATTGTTGTTGTTGTTTGTTTGTTTTTTTGCCACTATGCTGCTTCTTTATGTTTATATA ...x....x..:.x...x..x..x.:.......x....:.:.......:......---..x..... 55M3I8M 50/63 79.4% 66/94230402 0.0% 3/63 4.8% 104929914 85284641 +3034 chr4 + 190214555 170684817 170684816 170684871 55 TGAGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGGGGGAGGGGGAGAAT chr4 - 94230402 51684972 51684971 51685026 42545377 42545376 42545431 55 TGGGAAAAAAAAAAAAAAGGAGGAAGGAGAAAGAGGGATAAGTGAGAGTGAGAGT ..:...............:..:....:....::..::.x::.x...:.x....:. 55M 40/55 72.7% 55/94230402 0.0% 0/55 0.0% 118999845 71214710 +3088 chr4 + 190214555 170749234 170749233 170749326 93 CTTCCCTCCCTTCCCCTCCCCTCCCCTCCTCTCCCCTCGTCTC-CTCTCTTCTCCTTTGCTTTTCCTATTTGTTCCTTTTCTCATTTCTTCTTT chr4 - 94230402 20485618 20485617 20485710 73744693 73744692 73744785 93 CTTTCCACCCCTGCCCCACCC-CCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTTAATTTCATATTT ...:..x...:.x...:x...-....:.:.:......:x....-:..:.:.:...:..x.....:.:x..x.:.:x.x:.:.x.....x.x... 21M1D21M1I50M 62/92 67.4% 93/94230402 0.0% 2/92 2.2% 150263616 39950939 +11692 chr4 + 190214555 170802465 170802464 170802778 314 ACAAATAATGAGATTATTCCTGCTATAATTTCTGTTATAACACAATATGATCTCTTCCTGACAAGCATTTTATATAAATTACTGCAATTTTAATGTTAAATGTTATTTTAACACTTGTGTTTGGACTCCAACATGGAATTATATTACTTACTTTATTAGCTCATTTACCACCTACCATGCTATATTATTAGATAATTCTTTGAACATGAAATGTTTGGGGTTACTTCTGATAGTAATTTAAGGACCCCTTTGGCTTACCATTTACTGTCTCTT------TCCATAA----CTGTTTCATGTCTGTGGTCTT---TATTAAAAATTAG chr4 - 94230402 50313989 50313988 50314304 43916099 43916098 43916414 316 ACAAATAACGAAACTGTTTCTTTTGAAATTTCTGTAATAGTGCAGCACG-------CCCACCAGGCAGCTTAAACAAATTACTACAAATGTAACGGTAAATGTTTTTTTAACACGTGC-TTTGGACTCCAACATAGAACTATATTACATATTTTATTAGATCATTTACCACCTACTAGGTTATATTATTAGCTAATTCATTGAACATGATATGCATTAGGTAGATTTGGCTACCACTTTAAAGTAACTTTTATCTGAATCTGCTTTGCATTTTTGTGAATCCACAAAAGTCAGTTTTA---CTGTGGTTTTATAAATAAAAAATAAG ........:..:.:.:..:..x:.:x.........x...:::..::.:.-------..::x..:...x:...x.:........:...x.x...:.x........x.........x..:-...............:...:........x..:........x...............:.x.:...........x......x..........x...:x.x:...x:x..:x.x..x:.x.....:.xxx.:...:x..x.x:x.x:x:..:x.:..------....:..----.x....:.---.......:..---x..x......x.. 49M7D62M1D154M6I7M4I8M3D10M3I13M 222/303 73.3% 316/94230402 0.0% 24/303 7.9% 120488476 69726079 +3215 chr4 + 190214555 170828372 170828371 170828503 132 AAAAGGACATATTGAAGACAG-AAAAAGAAGAGCCTTTATATAATTACTAAGAGTCTTGAAATTTAAAAAAAAATG------AAAAAATAAATTCTAAACAATAATTTTCAAGAATATAAGAAAAA-------AAAGAAACTAGGA chr4 - 94230402 31007209 31007208 31007354 63223049 63223048 63223194 146 AAATGTACAGATGCAACACAGTAaaaaaaaaaaacaaaacaaaaacacaaaacaaaacaaaaacaaaaaACAGCTGTTTTACAGAAAATAAACCTTTAACAATAATTTCCAAGAATATAATAAAAAGGTGATCAAAAAGGCTAAGA ...x.x...x..xx..x....-.....:..:.:x.xxx.:.x..x:..x..:x:xxx::...x:x.....x.:x..------.:........:::.x...........:...........x.....-------...:.::...:.. 21M1I54M6I44M7I13M 89/132 67.4% 146/94230402 0.0% 14/132 10.6% 139821163 50393392 +3098 chr4 + 190214555 170843005 170843004 170843050 46 AAAAAAAAAAAAAAAACAACGAAAACAAACAAACAAACAAAAAACT chr4 - 94230402 11261224 11261223 11261269 82969134 82969133 82969179 46 AAAAAAAGGAAACAGAAAACAAAAACAAACAAACAAACAAAAGGCT .......::...x.:.x...:.....................::.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 159581781 30632774 +3136 chr4 + 190214555 170891447 170891446 170891524 78 TTCATTTAAAATGATA-----TGTTTTGTCGCATGAAAGGAAAGAAGGTTAGCATTCCCCTTGACAAACCTAGAAGAGGCTCT chr4 - 94230402 48615052 48615051 48615134 45615269 45615268 45615351 83 TTCTTATGAAATTATAGCCAATTTCTTATTGTATGAAACGTGAGAAGGTGAGTGTTCCCCTTGATAAGGATGGAACAGGCCCT ...x.x.:....x...-----.x.:..:.:.:......x.x:.......x..::..........:..:xx.:...x....:.. 16M5I62M 56/78 71.8% 83/94230402 0.0% 5/78 6.4% 122276395 67938160 +3524 chr4 + 190214555 170903070 170903069 170903120 51 CAACAACAACAACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAA chr4 - 94230402 94076888 94076887 94076938 153465 153464 153515 51 CGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATCAA .:.............x.........:.:.:.............x.:.x... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 76826182 NA +3444 chr4 + 190214555 170903072 170903071 170903117 46 ACAACAACAACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAG chr4 - 94230402 94076884 94076883 94076929 153474 153473 153519 46 ACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAG ...:.:.......x..x..x.......................... 46M 41/46 89.1% 46/94230402 0.0% 0/46 0.0% 76826188 NA +3044 chr4 + 190214555 170903081 170903080 170903114 34 ACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGA chr4 - 94230402 76845957 76845956 76845990 17384413 17384412 17384446 34 ACAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA ..................:............... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 94057124 NA +3150 chr4 + 190214555 170903081 170903080 170903120 40 ACAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAA chr4 - 94230402 87676344 87676343 87676383 6554020 6554019 6554059 40 ACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAA ..x...............:.................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 83226737 NA +3269 chr4 + 190214555 170903085 170903084 170903138 54 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGCAATGCAATAAATGGTAGAGG chr4 - 94230402 76845959 76845958 76846007 17384396 17384395 17384444 49 AAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGA-----CCAATAAATGTCAGTGG ................................-----x.........x:..x.. 32M5D17M 45/49 91.8% 49/94230402 0.0% 5/49 10.2% 94057126 NA +3834 chr4 + 190214555 170912980 170912979 170913098 119 TGCATGCATATATATACATATATACATATATACAC--ATATATACATATATACACATATATACATATATACATATATACATATACCTATATACGTATATACATATATACATATACCTATAT chr4 - 94230402 73121104 73121103 73121224 21109179 21109178 21109299 121 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT ...........x:.....:.......:.x.x:..:--:..:....:....x::...::x:..:..:.:x::.:.....x...::..:.:.x.x::.:.:.::....x:..x..x:.:x... 35M2I84M 74/119 62.2% 121/94230402 0.0% 2/119 1.7% 97791876 92422679 +3723 chr4 + 190214555 170913112 170913111 170913219 108 TATACATACATATACATGTACATATACACATACATATACATGTACATATACACATATATACATGTACATAT--ACACATATATACATGTATATATACACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGA--GTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:...:.....x...::...........x.x::..:x--.......:::.:.x:..:..:x...:..:.--::.......x.:.:.:x:.:.x.x........:.... 39M2D30M2I37M 71/106 67.0% 108/94230402 0.0% 4/106 3.8% 97792010 92422545 +3533 chr4 + 190214555 170913140 170913139 170913246 107 CATACATATACATGTACATATACACATATATACATGTACATATACACATATATACATGTATATATACACACACATATATACA--TATATGCGTGCATGTGCGTAGGCAA chr4 - 94230402 73121106 73121105 73121214 21109189 21109188 21109297 109 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAA ...:.....x...::...........x.x::.::x.......:::.:.x:..:..:x......:.:x::...:...x....:--:.:.x:x:::..::..::..:.... 82M2I25M 66/107 61.7% 109/94230402 0.0% 2/107 1.9% 97792034 92422521 +3021 chr4 + 190214555 170913751 170913750 170913805 55 AGACAACAAAAACAAAGGGAAAGCAAGATATATATATATACACACAAACTTATAC chr4 - 94230402 70707580 70707579 70707634 23522769 23522768 23522823 55 AGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTAC ...x....:...x.x...:....x..x.............:.....x..x::... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 100206171 90008384 +3547 chr4 + 190214555 170921942 170921941 170922082 141 TTTATAGAAGTGTTAAAGTTCA---GGAATTTTCTCTCTGTGTTTTGAAACAGAAATT------GTGATTGATACACACATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAAAGTAATA chr4 - 94230402 8395728 8395727 8395870 85834533 85834532 85834675 143 TTCATACAACCTTTAGAATTCAAGTGGAATTT-------GTACATACAGAAGAAAATTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:...x..x:x...:.:....---.......-------..::x.xx.:.x::.....------.:x..xx:.::.::::.::...x.:..:...x..:....:...::x..:..xx...:...............x.......xx.... 22M3I7M7D19M6I86M 89/134 66.4% 143/94230402 0.0% 16/134 11.9% 162526214 27688341 +3193 chr4 + 190214555 170922008 170922007 170922073 66 ACACATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x....:.x.:::.:.::.:.::.:...:......:.xx:.:.....::............. 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 155957189 34257366 +3093 chr4 + 190214555 170922010 170922009 170922074 65 ACATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 14964819 14964818 14964883 79265520 79265519 79265584 65 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ...:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............ 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 155957191 34257364 +3255 chr4 + 190214555 170922010 170922009 170922074 65 ACATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395860 85834543 85834542 85834607 65 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA .::.:.::...x.:..:...x..:....:...::x..:..xx...................x... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 162526214 27688341 +3066 chr4 + 190214555 170922014 170922013 170922072 59 ATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395804 8395803 8395862 85834541 85834540 85834599 59 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 162526210 27688345 +3196 chr4 + 190214555 170922019 170922018 170922101 83 TATATATATATATATATATATATATATATATATATACACACACACACACAC-----ACACAAAGTAATATTCATCCACACAA----AGAAAG chr4 - 94230402 88147180 88147179 88147271 6083132 6083131 6083223 92 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACACCATATATAGGGAGAAGCATATATCAACACTACATCAGAAAG ..:..:..x:x..............:.x.:.:...:.:.............-----.:.x::..x.::..x:...x....x.----...... 51M5I26M4I6M 61/83 73.5% 92/94230402 0.0% 9/83 10.8% 82774839 NA +8225 chr4 + 190214555 170923311 170923310 170923501 191 CACTTGTTATTACGCTTTCTTTAAAAGTGCCCAAGAAAGAATTTAAATTTATCACTCCTCTTTAAACTTGTAAAAGCCTGTGTTAATTGGATGTCAACCTCT---TTTTACTCACATGCTTGCTGACATTAAGGGGCATATGATTTAAAAGCAACCTAAAGAATATGAAGAATATTCACAATATTTACTAGCTT chr4 - 94230402 50350776 50350775 50350954 43879449 43879448 43879627 179 CACTTGTAATTTCACTTT----AAAAGTGCCAAAGAAACCATTTAAATTTATGATTGCTTATTAAACCTGTAACAGTCTGTGTTAATTGGATGTCACCCTTCATAATTCATTTATGTGTTTGCTGACAATAAAAGCCATATGATTTAAAAGCATCT----GATTCTAAA-------CACATTATTTACTGTCTT .......x...x.:....----.........x......xx............x.:.x..:x......:.....x..:...................x...::---x..:.:.:.::..:.........x...::.x.................x.:----..x.x.:..-------....x........:x... 18M4D80M3I51M4D9M7D18M 140/176 79.5% 179/94230402 0.0% 18/176 10.2% 120572535 69642020 +3171 chr4 + 190214555 170931051 170931050 170931202 152 TTGTAATTTAAAGAAACATGTTTA-----------TTTTTATTATTTTACTTGTTTCTTATGATGGTAAAAGTCACATTCGACAATGCA-GCATG----------TTAAAT-----------------GTAGCAG-ATTTTCA----TTTGTCCCCATAAAAGGGTTTGCATTTGTGTATGTGTGTGTATGTGTGC chr4 - 94230402 34346700 34346699 34346891 59883512 59883511 59883703 192 TTGTAATATGCAAAAGTATATTCAAAGCCTAACAATTATTACTTTTTTTCTCATTCTTTTTGATG--CAAAGTTAA--TGGTCAATGCAAGCATACCCTTCCTCTTTAAGTCAATTTGTTCTTAACTTGAAGCAGCATTTACAAAAATTTATCCCACCAACAGGATTTGGATCTGTGTGTGTGTGTGTGTGTATGC .......x.:x.:..::..:..:.-----------..x...:.x....x..::..::..x.....--x.....:.x--.x.x.......-....:----------....:.-----------------.x.....-....x..----...:....xx:..x...:....x..:.....:.........:...:... 24M11I30M2D9M2D11M1I5M10I6M17I7M1I7M4I49M 111/148 75.0% 192/94230402 0.0% 48/148 32.4% 136584351 53630204 +3252 chr4 + 190214555 170941293 170941292 170941368 76 AAAAGAACCAACAACAACAACAACAAAAAAGGGGAAAACCCAAAAGACCAGAGTGCCTTTACTCCTCCAAATGATT chr4 - 94230402 48161345 48161344 48161420 46068983 46068982 46069058 76 AAAAAAACAAACAACAACAACAACAAAAAAAAAGATATCCAGAACTACATTTGTGACTTGGTATTTCCAAATGATT ....:...x.....................:::..x.x..x:..xx..xxxx...x...x::x::........... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 122779948 67434607 +3318 chr4 + 190214555 170953607 170953606 170953723 117 CTCTCTTCTTTC-TTTTTCTTTCTTCTTTCTTTCTTTTTCTTTTTCTTTCTCTCTCTCTCCTTCCTTCCTTTTCTTTC----CTTTCTTTTCCTTCTTTCCTTCCTTCCTTTCCCTTCCCTT chr4 - 94230402 43081900 43081899 43082021 51148382 51148381 51148503 122 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTT ...:....:...-.x:...xxxx.x..x..::..:.....:....:........x.:....x.x:.:.x...:xx...----...::x....:....:..::..::..:x.xx.:.:::... 12M1I65M4I40M 75/117 64.1% 122/94230402 0.0% 5/117 4.3% 127871707 62342848 +3051 chr4 + 190214555 170953610 170953609 170953672 63 TCTTCTTTCTTTTTCTTTCTTCTTTCTTTCTTTTTCTTTTTCTTTCTCTCTCTCTCCTTCCTT chr4 - 94230402 9693772 9693771 9693834 84536569 84536568 84536631 63 TCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..:...::....::....:.....:x:...:.x..:..x..x...:.:...:..:.:....:. 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 161259838 28954717 +3087 chr4 + 190214555 170953639 170953638 170953724 86 CTTTTTCTTTTTCTTTCTCTCTCTCTCCTTCCTTCCTTTTCTTTCCTTTCTTTTCCTTCTTTCCTTCCTTCCTTTCCCTTCCCTTA chr4 - 94230402 8141241 8141240 8141321 86089082 86089081 86089162 81 CTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTT-----TTTCCCTGCACTTTTTCCCTTCTCCTA ...::x.:...x..x.......:...:x...x....:::.x.:.::...:....-----.....:.x.x:::.........:.:.. 54M5D27M 55/81 67.9% 81/94230402 0.0% 5/81 6.2% 162812398 27402157 +3284 chr4 + 190214555 170953645 170953644 170953807 163 CTTTTTCTTTCTCTCTCTCTCCTTCCTTCCTTTTCTTTCCTTTC------------------TTTTCCTTCTTTCCTTCCTTCCTTTCCCTTCCCTTACCCTCCCTCCCTCCCTTCCTTCAATCCATCCATCTTTTTCTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTTTCT chr4 - 94230402 76984153 76984152 76984333 17246070 17246069 17246250 181 CCCTGTCTCCCCCGCCAACATCTTCTCATTTTATCTTTCTTCTCACTGATGAATGATGATTACTTCTCTTCCTACCATTCTGCCTTTCTTCCCCCCAATGGCTTTTCCCTTCCTTCCCTCCAGCTTCCGCCCTGGCTCGTGTTTTATCTCCTAACATCTCTCACTTTCTTTCTCTTCTGCT .::.x...::.:.x.:xx.x:....::x::..x......:.:..------------------:..::....:.x..x.:..x......::::...:x.:xx::::.....:......:..x.x.:x:.xx:..xx:..x:x..:.x....::xx:x......x..:.........::.x.. 44M18I119M 93/163 57.1% 181/94230402 0.0% 18/163 11.0% 93969492 NA +3265 chr4 + 190214555 170953716 170953715 170953789 74 CTTCCCTTACCCTCCCTCCCTCCCTTCCTTCAATCCATCCATCTTTTTCTCTTTCTTTCTCTCTTTCTCTCTCT chr4 - 94230402 7791419 7791418 7791492 86438911 86438910 86438984 74 CTTTCCCCACCATCTCTCCCCTCCTGTCTCGTTTCGTTCCATCTTTTCCCATTACTTTCTCTCTCTCCCACCCT ...:..::...x..:.....::...x:..:xxx..xx..........:.:x..x..........:..:.x.:.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 163162297 27052258 +3293 chr4 + 190214555 170962537 170962536 170962619 83 GCATATATGTGTGTACACACAGACACGCACACATACACACACACACACACACACACACACACA-AAATGGAATACCAAGAATAC chr4 - 94230402 8395802 8395801 8395885 85834518 85834517 85834601 84 GCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTAC .....x.::...:.x:...:.x::.:..x:....xx.:.................x.....x.-:...::..x...x.:.x... 63M1I20M 58/83 69.9% 84/94230402 0.0% 1/83 1.2% 162566735 27647820 +3014 chr4 + 190214555 170962539 170962538 170962596 58 ATATATGTGTGTACACACAGACACGCACACATACACACACACACACACACACACACAC chr4 - 94230402 14964827 14964826 14964884 79265519 79265518 79265576 58 ATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:.x..:....:.....:x::.:.:.:.:.:.xx........::............. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 155997712 34216843 +3411 chr4 + 190214555 170972375 170972374 170972434 60 CTTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735344 92735343 92735403 1495000 1494999 1495059 60 CTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:.:::....x.....:...:..:.:........x......:.x.........:.x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 78237031 NA +3735 chr4 + 190214555 170972375 170972374 170972432 58 CTTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735346 92735345 92735403 1495000 1494999 1495057 58 CTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...x.....x.....:...:..:.:...............:.x.........:.x... 58M 48/58 82.8% 58/94230402 0.0% 0/58 0.0% 78237029 NA +3525 chr4 + 190214555 170972376 170972375 170972440 65 TTTCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681939 56681938 56682003 37548400 37548399 37548464 65 TTTCATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ..........x:.:....x:.:...:....:..xx.......x...x...x....x......... 65M 51/65 78.5% 65/94230402 0.0% 0/65 0.0% 114290437 75924118 +3136 chr4 + 190214555 170972378 170972377 170972436 59 TCATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735345 92735344 92735403 1495000 1494999 1495058 59 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.::....x.....:...:..:.:......x.x......:.x.........:.x... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 78237033 NA +3053 chr4 + 190214555 170972380 170972379 170972438 59 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 56681945 56681944 56682003 37548400 37548399 37548458 59 ATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTT ....x:.:....x:.:...:....:..x:.......x...x...x....x......... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 114290435 75924120 +3071 chr4 + 190214555 170972380 170972379 170972430 51 ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.....:...:..:.:..........x....:.x.........:.x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 78237027 NA +3121 chr4 + 190214555 170972381 170972380 170972434 54 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200274 4200273 4200327 90030076 90030075 90030129 54 TAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..x............:.:.:..............::...:xxx.......x... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 166772107 23442448 +3870 chr4 + 190214555 171017171 171017170 171017283 113 ATTCACACATGTATACGTATATACACACATACATATATACGTATATATACACACGTAT--ATACGTATATATACACACATATATACGTATATACTATATATACACACGTATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ...:.x....:.....::.:.:.....x:x.....:::.:.x:x:.x.:....:....--.x:.:.x..x...:........x..:x.....:.:.:.x.:..xx..:....x.. 58M2I55M 74/113 65.5% 115/94230402 0.0% 2/113 1.8% 166599828 23614727 +3115 chr4 + 190214555 171017193 171017192 171017267 75 ACACACATACATATATACGTATATATACACACGTATATACGTATATATACACACATATATACGTATATACTATAT chr4 - 94230402 7596413 7596412 7596487 86633916 86633915 86633990 75 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCATTCTTTGT .:...x..:....:.x.:.......:....:.:.:.....:x.:......x:..::.:::...:x:..x..x.:. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 163420780 26793775 +3077 chr4 + 190214555 171017485 171017484 171017587 103 AAGATATATATATATATACATATATAATGTGTGTGTATATATATA-----TATATACACACACTATACATTATATACTATATATGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 53931630 53931629 53931736 40298667 40298666 40298773 107 AAGAAGTATACACGTATATAAATA-AACCTGTTTTCAGAATAATAAAAAACACACACACACAAAATAAAATAAATCTCAAATACATATGTGTGTGCGTGTATATATAT ....x:....:.::....:.x...-..:x...x.x:.x.xxx...-----:.:.:.......xx...x.x..x..x::.x...::.:........:............ 24M1D20M5I58M 70/102 68.6% 107/94230402 0.0% 6/102 5.9% 117085855 73128700 +3032 chr4 + 190214555 171038875 171038874 171038951 77 ATTGATTTTATCTTCTTATTGTGCTTTCTATTTTATTTTACTCACATTTATTTCTTTCTGCTGCTTGCGTTTCATTT chr4 - 94230402 22553946 22553945 22554022 71676381 71676380 71676457 77 ATTCATTTCCTTTTCATTCTTTACTCTCTTTATTCCTCTGTTCACATTTATTTCCTTCTGCATCTTCCTCTTAATTT ...x....:x.:...x.x:.x.:..:...x.x..x:.:.::.............:......xx...x.x:..x.... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 148484929 41729626 +3558 chr4 + 190214555 171072394 171072393 171072464 71 CTATTTTTCTTTCTCTTTCTTTTGCCTCTTAAGCCTCCACTCCTAAACTCCTCTTGTGTATCTGTGTCCTA chr4 - 94230402 5983431 5983430 5983498 88246905 88246904 88246972 68 CTTTCTTTTTTTTTTTTTCTTTTGC---TTGAGCCTCCATTCCTAAACCCATCCTGCTTATCTGAATCTCA ..x.:...:...:.:..........---..:........:........:.x..:..:x......x:..::. 25M3D43M 52/68 76.5% 68/94230402 0.0% 3/68 4.4% 165088963 25125592 +3158 chr4 + 190214555 171099433 171099432 171099498 66 ACATAACTTTTTCACATAAAAAATTTATTCAGGGATTATATCTATTTG---GTTTTTTATGTCACTCAG chr4 - 94230402 66533034 66533033 66533101 27697302 27697301 27697369 68 ACATAATTTTTTCACATAAAGAACTTACTTAGGGTTTTTGTTTGTTTGTGTGTTTGTTTTGT-GCTCAG ......:.............:..:...:.:....x..x.:.:.:....---....x..x...-:..... 48M3I11M1D6M 52/65 80.0% 68/94230402 0.0% 4/65 6.2% 104566399 85648156 +7780 chr4 + 190214555 171129326 171129325 171129576 251 TCTCTTATTTCTTCCTTGAA-TGAACTGTTAACAACCAGAATCACTTCCACAACC-----AAAGAATGGAAATGAAC--ATGAATTATTAATTCTATCT-GAAAAGATTTAGATGCCTTTTAACAATCTGTTAATTTTACAGTCAAGATTCAATCTTTCAATAATTCTAATGTCATC---AGAGAGAAAGAAAACCTTTCTGGGAAAACTTCA--AAGTAAGTTTCATCACTTGGAA--GTACAATACAAGGAAAAAATACCAAAGT chr4 - 94230402 50264265 50264264 50264526 43965877 43965876 43966138 262 TTTCTTCTTTC--CCTTGAAGTGTGCTGTAAATAAGCAATGGCATCCCCACACCTGAGAGAAGAACTGGGTATGAATTTATGAATTATTTATACTGTCTAGAATAGATTTAGGTCTTTTCAGACATTCTGTGAGTTTTGCAGTCAAGATGCAATCTTTCAATAATTCAGATCTCATCAAAAGAGAATAAGAAACCTTGTTTGGATATATTCTAGTAAACAACTTTAAAGTGCTGGAAATATACAATGCAAGGACAAGA---CAAAGT .:....x....--.......-..x:....x..:..x..:x:x..:::.....x.:-----..::.x...:x.....:--..........x..x..:...-...x........:.x::..:x:...x.....x.:....:..........x.................x:..x.....---.....:x......x.:.x.:...:x.x.:.::.--..::..x...x.xxxx:.....--:......:......x..:.---...... 11M2D7M1I34M5I17M2I20M1I77M3I33M2I22M2I19M3D6M 180/246 73.2% 262/94230402 0.0% 21/246 8.5% 120865061 69349494 +3132 chr4 + 190214555 171185117 171185116 171185156 40 AACAAAAACAAACAACAACAACAAAAAAGAAATAACAAAA chr4 - 94230402 87321928 87321927 87321967 6908436 6908435 6908475 40 AACAAAAACGAACAACAACAACAAAAAAGTAACAGCAAAA .........:...................x..:.:..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 83863189 NA +3078 chr4 + 190214555 171185120 171185119 171185162 43 AAAAACAAACAACAACAACAAAAAAGAAATAACAAAACAGGCA chr4 - 94230402 49583456 49583455 49583498 44646905 44646904 44646947 43 AAAAGCAAACAACAACAACAAAAAAAATTCAACAAAACAAGCA ....:....................:.xx:.........:... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 121601664 68612891 +3216 chr4 + 190214555 171220243 171220242 171220318 76 TATATATTTCTTTATATATATATTTCTTTATATATATATATTTGTGTGTGTGTCTGTGTATATATATACACATATA chr4 - 94230402 19559252 19559251 19559327 74671076 74671075 74671151 76 TATTCCTTCTTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ...x:x..::.:.::..x.x..x..:...x..xx...x.x...x.........x..............:.:...:. 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 151660991 38553564 +3059 chr4 + 190214555 171220247 171220246 171220322 76 TATTTCTTTATATATATATTTCTTTATATATATATATTTGTGTGTGTGTCTGTGTATATATATACACATATATACA chr4 - 94230402 19559252 19559251 19559327 74671076 74671075 74671151 76 TATTCCTTCTTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ....:...:x.x.::..x...xx..x.x.x..xx.....x.x.x.....x.....:.:......:.:......... 76M 54/76 71.1% 76/94230402 0.0% 0/76 0.0% 151660995 38553560 +3099 chr4 + 190214555 171220250 171220249 171220316 67 TTCTTTATATATATATTTCTTTATATATATATATTTGTGTGTGTGTCTGTGTATATATATACACATA chr4 - 94230402 19559261 19559260 19559327 74671076 74671075 74671142 67 TTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ....x:..x.x..xx...:....xx...x.x.x.............x...:..........:.:.:. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 151660989 38553566 +3304 chr4 + 190214555 171220302 171220301 171220359 58 ATATATATACACATATATACATACATATATATACACATATATATACATACATATATAT chr4 - 94230402 17520753 17520752 17520810 76709593 76709592 76709650 58 ATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATAT .......x.....x...:........:.:x..:.x::....x.:....:......... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 153699549 36515006 +3873 chr4 + 190214555 171220317 171220316 171220424 108 TATACATACATATATATACACATATATATACATACATATATATCCACATATATATACATACATATATATACACATATATATACATACATATATATATACACATACATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:...:.....x:...........:.:.x.x:...:x:..:x:..:....x:....::x:.....:.:x::.:.....x.:.::.x:.:.x.x.:......::... 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 98099215 92115340 +3447 chr4 + 190214555 171220324 171220323 171220387 64 ACATATATATACACATATATATACATACATATATATCCACATATATATACATACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x...:........:.:x..x.x::....x.:....:........... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 153699575 36514980 +3236 chr4 + 190214555 171220350 171220349 171220412 63 ACATATATATCCACATATATATACATACATATATATACACATATATATACATACATATATATA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x......xx...:.x...:........:.:x..:.x::....x.:....:.......... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 153699601 36514954 +3824 chr4 + 190214555 171220369 171220368 171220480 112 TATACATACATATATATACACATATATATACATACATATATATATACACATACATATATATATATACACACATACATATATATATATATATATATATATATATATATATACA chr4 - 94230402 73121102 73121101 73121213 21109190 21109189 21109301 112 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .:.:...:.....x:...........:.:.x.x:...:x:..:....::...x:..:.::x:....::::x:........x...:::x:.:.x.x.:.:.:..:....x:.. 112M 68/112 60.7% 112/94230402 0.0% 0/112 0.0% 98099267 92115288 +3336 chr4 + 190214555 171220380 171220379 171220501 122 ATATATACACATATATATACATACATATATATATACACATACATATATATATATACACACATACATATATATATATATATATATATATATATATATATACACACACACACAGACACACACAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-------CACAAACACTAACATATAAAC ..x..x...:.....:.:...:...:.x:x.:....:...:x:x:.x.::.:..::.:xx.x:...x..x.....:.:....x...x.....::-------....x....x:...:.:.x.. 94M7D21M 73/115 63.5% 115/94230402 0.0% 7/115 6.1% 166803037 23411518 +3039 chr4 + 190214555 171220389 171220388 171220446 58 CATATATATACATACATATATATATACACATACATATATATATATACACACATACATA chr4 - 94230402 7596412 7596411 7596469 86633934 86633933 86633991 58 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA ....:.x..:......x..:..........::...:....:.x.:.:.:..x...::. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 163623977 26590578 +4101 chr4 + 190214555 171220395 171220394 171220540 146 TATACATACATATATATATACACATACATATATATATATACACACATACATATATATATATATATATATATATATATATATATACACACACACACAGACACACACACAAATATATATAGCGCCGGTTTTCAGTCTGAGATCAGCCC chr4 - 94230402 73121102 73121101 73121244 21109159 21109158 21109301 143 TGTGCATGCATATTCA--TACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTATTTTTCAG-ATACGCTCAGCCC .:.:...:.....x:.--........:.:.:.x.x::..:x::......:....x:..:.::x:.....:.:x:..:.....x.:..:.x....x.........:::.x.x::.x..xx.x:::x.......-x.:x.x....... 16M2D114M1D13M 90/143 62.9% 143/94230402 0.0% 3/143 2.1% 98099293 92115262 +3023 chr4 + 190214555 171220398 171220397 171220444 47 ACATACATATATATATACACATACATATATATATATACACACATACA chr4 - 94230402 45271682 45271681 45271728 48958675 48958674 48958721 47 ACTTCCATATCTATATATACACACATATATATGTATACAAACACACA ..x.x.....x......:...:..........:......x...:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 125948716 64265839 +4011 chr4 + 190214555 171220421 171220420 171220496 76 CATATATATATATACACACATACATATATATATATATATATATATATATATATATATACACACACACACAGACACA chr4 - 94230402 8395787 8395786 8395862 85834541 85834540 85834616 76 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.:...:.:::..:.x....:...x..:....:...::x..:..xx...:.:................... 76M 55/76 72.4% 76/94230402 0.0% 0/76 0.0% 162824634 27389921 +3145 chr4 + 190214555 171220449 171220448 171220503 55 TATATATATATATATATATATATATATATACACACACACACAGACACACACACAA chr4 - 94230402 10572843 10572842 10572896 83657507 83657506 83657560 54 TAAATATATATAGAGAAATATATATATATGCACACACAGACAGACAT-CATACAA ..x.........x.x.x............:........x.......:-..:.... 47M1D7M 46/54 85.2% 54/94230402 0.0% 1/54 1.9% 160647606 29566949 +3011 chr4 + 190214555 171269907 171269906 171269950 44 GAACAATACTTAACAATGAAATTAAAATAAAGAAAATAAAAAGA chr4 - 94230402 54823007 54823006 54823050 39407353 39407352 39407396 44 GAACAATACTTAACAATAAAGTTAAAAAAGAAAAAAGAAAAAAA .................:..:......x.:.:....x.....:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 116446900 73767655 +3017 chr4 + 190214555 171279113 171279112 171279179 67 ATCAATGAAGTTAGACCAAAATGTCATTGGTTCAAAAAAAAAAAGGAGCAATAACTCAAAAGGAGGG chr4 - 94230402 56866758 56866757 56866824 37363579 37363578 37363645 67 ATTTATAAAGCTAGACTGAAATGACATCTGTTCAAAAAAAAAAAAAAAAAAGACTTAAAGAAAAGAG ..:x..:...:.....::.....x...:x...............::.:x..x.x:.x..:.::..:. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 114412355 75802200 +3242 chr4 + 190214555 171280277 171280276 171280362 86 GCACACACATATACACATATACTCACATGTACATGCACATATATACACATATACAAATGCACATATACACACACACATATATACAC chr4 - 94230402 73121076 73121075 73121160 21109243 21109242 21109327 85 GTACACCCACAGAAAC-TGTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACAC .:....x..:.x.x..-.:..x..x.:...:......:..x:.............x.x:x:...:x::...:..::...x:..... 16M1D69M 58/85 68.2% 85/94230402 0.0% 1/85 1.2% 98159201 92055354 +3315 chr4 + 190214555 171280300 171280299 171280387 88 CACATGTACATGCACATATATACACATATACAAATGCACATATACACACACACATATATACACATTATTTCTCTCTTACATGTGAGAA chr4 - 94230402 17520750 17520749 17520837 76709566 76709565 76709653 88 CAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATACCCCACTGGTCTATTCCATCAGACAA ..x..:..:.x:....x...:...:.:..:::.....x::....x.....::........:..x::.:.xx...x..x...xx..x.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 153759550 36455005 +3014 chr4 + 190214555 171316572 171316571 171316679 108 CATATATATACACCCACATATACATACATATATATATATGTGTGTATATATATATAAAATCACTTATGCAGATTCTGAAAAAAATTAGTTAAGACACCAGGCTCCAAA chr4 - 94230402 35241744 35241743 35241851 58988552 58988551 58988659 108 CATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATAATTTCTTTTTTGAGGGTTAGGAGAAAGGACAGGGAAAGTACATTGCTTTAGA ....xx....x.:x.x:..xx.x.:.::.x......:....................xx..x:..x..x:.:..xx..:...::x:..xx..:::..xxx...::.:. 108M 67/108 62.0% 108/94230402 0.0% 0/108 0.0% 136074828 54139727 +15261 chr4 + 190214555 171316769 171316768 171317228 460 TTTCAGCTGTGTATTCAAATATGTACTGCTGATGG-TGCTTCCCTTGTGACTGATATTATGATGATGAGACTAAGAAGTGTCTTTC-AAGAAATATT--ATCTGACAGACAGTATCTTGATTAAGATGAGCTTTAATTAAGATAAATGA-GGCTGCTTATTCATCTGTTTGGCATCATGAGCCCTGAATCCTCAGAATAATGTTAAAAGTATTTAAAAAATTCCATTTTCTTATTGAAAACACAAATTAGATTTAGAGTGTGTAGCTTGCCCACCTGCACTG-TAAGCATGGCCCTGTTAGAAAGCACTGATGCTGCAATTTCATTACAGTGATCTCTCAACAGAATGGACT--TGCTGAGTACAAAACAGCATACAGGGATGCCAGTCAGCAGGATTGGTTTTAGAAAAAAAAAATGTTTTTAAACAAGGTTAAGCCTAATTGGTGCTGAT----ATGCTCTTCATTTATT chr4 - 94230402 50192991 50192990 50193443 44036960 44036959 44037412 453 TTGCAGCTATACATTCA--------TTCTTGATGGATGTTTCCTCTGGGAACAATGCATCTATT------CTAAGAATTTTAGTTCTAAGTAGGATTGCATCACAGAGAGAGTACCTTGATTAAGATGAACTTTAATTAAGATAAATGATGGCTGCTTAGTCATCTGTTTGGCATGGTGAGACCTGTATCTTCAGACTACTGTTAGAAGTAATGAAAATTTTTCATTTTCTTAGCGAAAGCACAAATTAGATTTTGGCAGGATTG-TTGCCCACCTGTCCTGATAAGTGTACACCTGTTAGAAAGCAGTAGTAA-GCAATTTCATTCTACAGATTTTTCTGTTTAATGAAGTTGTGTTATCTTCCCAGTATCCTATAAGGATACTTGTCAGCAGTATCTGTTCCAGGAGTAATAA---TATTTAATCAAGGTTAAGCTTAATTGCTACTGATGTAAATAGACCTCATTTCTT ..x.....:.::.....--------:.x:......-..:....::..x..x::..::xx:x..x------.......x.x.xx...-...x.:x...--...xx.x...x....:..............:...................-.........x...............x:....x....x...:.....x..x.....:.....x.x....xx..:..........x:....:..............x.:xx.x:.x.-...........:x...-....::.:xx..............x.::.:x-...........x:.xx...:.:..x::xx....:.x.--..:.:xx.x.xx.::.x.x..:.:....:.:x........x..:x...::..:.:x..x..---.x.....x...........:......x.:.....----..:xx.:......x.. 17M8D10M1I28M6D16M1I10M2I50M1I115M1D16M1I31M1D37M2I61M3D34M4I16M 323/441 73.2% 453/94230402 0.0% 31/441 7.0% 121123778 69090777 +3240 chr4 + 190214555 171328310 171328309 171328351 42 TCTCAAAAAACAAAACAAAACAAACAACAACAACAACAAAAA chr4 - 94230402 31015346 31015345 31015387 63215016 63215015 63215057 42 TCCTAAAAAACAAAACAAAACAAACAACAACAAAAACAACAA ..::.............................x.....x.. 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 140312964 49901591 +19943 chr4 + 190214555 171338728 171338727 171339084 357 TTTCCTTTTTCTCTAAAATTAGACTGGCAGCAAACACTGAAATGAGTTATGGAGCCTGACATCTAATTAACACAGTCTTTATAGGTTTAATGAGCAGTGATAAATTTCTATCCTTTTTTTGGCACATTTTAATTAGTTGTAATTATGAGTGGAGTGACCTGAAAAGATTGTTGTCCCACAGAATCACAGTAAATTTGTATAATTTATATTTGCAGGGACAGAATGTGTTTTTATGACATGAAAAACAAAAAGGTTATTTAAGCCATTATAGTAGTCATATAAAATCTTACC-TAAAGCTCAGATAACTAAAACATTGGGCATTCATATTTTACTAACATCAGGGGAGATGCTTCATAA chr4 - 94230402 50198344 50198343 50198690 44031713 44031712 44032059 347 TTTATTTTTTCACTAAATTTAGACTGGCAGCAAACATTTATGTGAATTACTGAGTCTGACATCTAATTAACACAGTCTTTACAGGCTTAATGAGCAGTGATAAATTTCTATCTTTTCTTTGGCACGTTTTAATTAGTTGTAATTACAAGCGGAGTGACCTGAGAAGATTGTTGTCCCATGGAGTCATCAGAAATTTGTATAATTTATATATGTAAAAACAGAATG---------GAATTGAAAAA-ACAAAGGTTATTTGAAGCATTGCATCTGTCATATATCATCCTTCTATAAAAGTCAGGTAAACAAAACAGTGGGCATAAATATTTGACT-TTATTGCAGGTGATGCTTCATAA ...x:......x.....x..................:.x.x:...:...:x...:..........................:...:..........................:...:........:...................::..:............:...............::..:...:x:x...................x..:.:::........---------..xx.......-.x...........:.:x....::.x:x........xx...:.x.:-....:x....:...x:......x.......xx......x...-x:..::x:..x............ 225M9D11M1D45M1I42M1D23M 281/346 81.2% 347/94230402 0.0% 12/346 3.5% 121140384 69074171 +3016 chr4 + 190214555 171342514 171342513 171342581 68 ATAATCTACAAAAAAAAAAAAAATCAGCAGGATTCAGCATAGCTTTTGCTGTTTGTTTGTTTGTTTCT chr4 - 94230402 21546969 21546968 21547036 72683367 72683366 72683434 68 ATATTCTGCATAAGGAAAGTGAATCAACAGAACACAACATATCTTTTTCTATTCATATGGTTATTTCT ...x...:..x..::...:x:.....:...:.:x..:....x.....x..:..::.x..x..:..... 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 149795545 40419010 +3323 chr4 + 190214555 171354531 171354530 171354718 188 TTATGTTAGTTGTACATGTATTTATAATTTATATATTTCTAATTAATTGTTGCTTTTATGTTTACATAATGTTTTTCTTTCTCTCTTATGACAGTTTTTGAGTTAAAGTCTATTTTTGTGATACAAAAATGACCAGTAATGATGACCATTTTTTCAAATGTTTGTTGGCTGCATAAATGTCTTCTTTT chr4 - 94230402 33470431 33470430 33470595 60759808 60759807 60759972 165 TTCTGTTGACT-TGCCTTTATGTGTAGTTCATTTATTTCTCATTAATTTTTGCTTTTTAACTTTCCTAATGCCTTTATCTCCCTCCCACTGCAA----------GAGATTTAGTTCC---------AGACGGGTGGTACTGCTAACAATCTATTCCCATGTTAACATGCAACACGA---TCTTCTTTT ..x....:::.-.:.x.x...x.:..:..:..x.......x.......x........xx::..x.x.....::...x.:..:...::.:x:..:----------:.::.:..x..::---------.:.:.:x::...x..x.:..x..:.x...xx.....x::xx..x:..::.---......... 11M1D82M10D13M9D50M3D9M 104/165 63.0% 165/94230402 0.0% 23/165 13.9% 137884100 52330455 +3055 chr4 + 190214555 171376655 171376654 171376711 57 TTACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652081 67652080 67652137 26578266 26578265 26578322 57 TTCCACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..x.....::...x...:...x.xx:.:.:.:.:.:...................:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 103724574 86489981 +3004 chr4 + 190214555 171376657 171376656 171376707 51 ACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652087 67652086 67652137 26578266 26578265 26578316 51 ACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA ..::...x...:...:..x:.:.:.:.:.:...................:. 51M 38/51 74.5% 51/94230402 0.0% 0/51 0.0% 103724570 86489985 +3041 chr4 + 190214555 171384824 171384823 171384868 45 CTTCTTGTTCTCTTCCTCCTCCTCCTCCACTTCCTCCTCCTCCAC chr4 - 94230402 35006025 35006024 35006069 59224334 59224333 59224378 45 CTCCTTGTCTATTTCCTCCTCTTCCTCAACTTCCTACTCCTCCAC ..:.....::x:.........:.....x.......x......... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 136378799 53835756 +3324 chr4 + 190214555 171395469 171395468 171395548 80 TGTGTGTGTGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATA chr4 - 94230402 81401294 81401293 81401373 12829030 12829029 12829109 80 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA .:.x.x.....x.....x..x.x......:::.:x.x..:::...:x........:....x..:.x:.....x.....:. 80M 55/80 68.8% 80/94230402 0.0% 0/80 0.0% 89994175 NA +3046 chr4 + 190214555 171395477 171395476 171395527 51 TGTGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x........:.::.......:....x.x........:.:..... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 123305980 66908575 +3168 chr4 + 190214555 171395479 171395478 171395529 51 TGTGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x.:......:.:........:....x.x........:....... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 123305982 66908573 +3179 chr4 + 190214555 171395481 171395480 171395531 51 TGTGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...:x..x.:......:::........:....x.x................ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 123305984 66908571 +3306 chr4 + 190214555 171395485 171395484 171395554 70 TGTATATATATATGTGTGTG-----------TGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATA chr4 - 94230402 70982598 70982597 70982678 23247725 23247724 23247805 81 TATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACA .:.......x...x::...:-----------...........:........:....:.x:...x....:...::...:.:. 20M11I50M 53/70 75.7% 81/94230402 0.0% 11/70 15.7% 100412887 89801668 +3112 chr4 + 190214555 171395487 171395486 171395561 75 TATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATATAGTTTTAA chr4 - 94230402 35554958 35554957 35555032 58675371 58675370 58675445 75 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAA ..x......x..x.........::::.:..x....:.......::...:.x.x:.:....x.x..x:.:x..:.. 75M 51/75 68.0% 75/94230402 0.0% 0/75 0.0% 135840529 54374026 +3109 chr4 + 190214555 171395489 171395488 171395553 65 TATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATGTATGTATATATAT chr4 - 94230402 35554958 35554957 35555022 58675381 58675380 58675445 65 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGAT ..x......x..x.........::::.:..x............::...:.x:x....:..x.x.. 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 135840531 54374024 +3076 chr4 + 190214555 171410769 171410768 171410834 66 GCATATATATACACACACTCACATATATATATATGTACACACACACACACACACACATATATACAC chr4 - 94230402 24136197 24136196 24136262 70094141 70094140 70094206 66 GCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..........x:.::x.x::::x......:....::.:...x...x...x..........x..... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 147274572 42939983 +3083 chr4 + 190214555 171410793 171410792 171410847 55 ATATATATATGTACACACACACACACACACACATATATACA--CATATATATACTAT chr4 - 94230402 66904847 66904846 66904903 27325500 27325499 27325556 57 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAAT ......:..:...........:..............x..x:--..x:.:.....x.. 41M2I14M 45/55 81.8% 57/94230402 0.0% 2/55 3.6% 104505946 85708609 +3833 chr4 + 190214555 171410794 171410793 171410904 111 TATATATATGTACACACACACACACACACACATATATACACATATATATACTATATAT--ATGTTTTATA---------TATATACACGTATATGTACATATATATGTTTGTGTGTATATAT chr4 - 94230402 21704674 21704673 21704788 72525615 72525614 72525729 115 TATATATATGTACACACACACACACACACGTGTATA-------AAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .............................:::....-------.x..:..x..x..:.--...x:.x::.---------.x......:.x....:x.x........:.x.:.:.....:x.. 36M7D15M2I10M9I43M 79/104 76.0% 115/94230402 0.0% 18/104 17.3% 149706120 40508435 +3833 chr4 + 190214555 171410794 171410793 171410904 111 TATATATATGTACACACACACACACACACACATATATACACATATATATACTATATAT--ATGTTTTATA---------TATATACACGTATATGTACATATATATGTTTGTGTGTATATAT chr4 - 94230402 21701101 21701100 21701215 72529188 72529187 72529302 115 TATATATATGTACACACACACACACACACGTGTATA-------AAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .............................:::....-------.x..:..x..x..:.--...x:.x::.---------.x......:.x....:x.x........:.x.:.:.....:x.. 36M7D15M2I10M9I43M 79/104 76.0% 115/94230402 0.0% 18/104 17.3% 149709693 40504862 +3030 chr4 + 190214555 171410796 171410795 171410876 81 TATATATGTACACACACACACACACACACATATATACACATATATATACTATATATATGTTTTATATATATACACGTATAT chr4 - 94230402 7435101 7435100 7435181 86795222 86795221 86795302 81 TGTATTTGGCCATACACATATACACAAACATATATACACATAAATGTAGGGTGTGGATTCTTCTTTTGTATCCATCCACAT .:...x..xx..:.....:.:.....x...............x..:..xx:.:.:x..x:..:x.x.:...x..:x:.:.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 163975695 26238860 +3435 chr4 + 190214555 171410804 171410803 171410878 75 TACACACACACACACACACACATATATACACATATATATACTATATATATGTTTTATATATATACACG-TATATGT chr4 - 94230402 34326624 34326623 34326699 59903704 59903703 59903779 76 TACAGAATCCCACGCACACATATATATACACGCATACATATTACGTATATGTTATACTCACAAACACACTATATAT ....x.xx.x...:......:..........::...:...:..::........x..:x:.:.x....:-.....:. 68M1I7M 55/75 73.3% 76/94230402 0.0% 1/75 1.3% 137084180 53130375 +3049 chr4 + 190214555 171453849 171453848 171453911 63 ATTTATTTGTTTGAGATGGAGTTTCACTCTTGGTTTTTTGTTTTGTTTTGTTTTTGTTTTTGT chr4 - 94230402 49277381 49277380 49277443 44952960 44952959 44953022 63 ATTTGCTTATTTGTGGAAATTTGTTTCCTTTGGTTTTTTGTTTTGTTTTGGTTTGGTTTTTGT ....::..:....x.:x::xx.x.:x.::.....................x...x........ 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 122176468 68038087 +3101 chr4 + 190214555 171516393 171516392 171516448 56 AGACTCCTTCATCTCTACAAAAAAAAAAAAAAAAAAAAGAGAGAGAAGAAAGAAAA chr4 - 94230402 49250031 49250030 49250086 44980317 44980316 44980372 56 AAACATCTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAA .:..x:.......::xx:.........:.............:x:......::.... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 122266362 67948193 +3164 chr4 + 190214555 171530329 171530328 171530410 82 CTGCAACCTCCGCCTCCTGGGTTCCAGCGATTCTCCTGCTTCACCCTCTCAAGTAGCTGGGACTACAGGCACGTGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTA----CACGTG-CACCAC ..:..:..:xx:x..:........x..:.x...x.xx.x:...x...:............:....----......-...... 65M4D6M1D6M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 153333203 36881352 +3232 chr4 + 190214555 171563065 171563064 171563129 65 AAGTGTTTTTGTTTTTTGTTTTCTGTTTTTGTGGTTTTTTTGTTTGTTTGGTTGGAGTTTTTTTT chr4 - 94230402 31411247 31411246 31411311 62819092 62819091 62819156 65 AAGTACTTGAGCTGATCGTTGTTGGTTTTTGTGGGTTTTTTGTTTGTTTGTGGGGGGTTTTTTTT ....::..xx.:.xx.:...x.:x..........x...............xxx..:......... 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 140151818 50062737 +3960 chr4 + 190214555 171644213 171644212 171644284 72 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAATATATAT chr4 - 94230402 72897603 72897602 72897674 21332729 21332728 21332800 72 aacaaaaaaaaaaacaTAAAAAATAAGAAAATAATATATATGTGTGTATATATATATAAATCTCATATTTAT ..x...........x.x......x..:....x.........:.:.:............x..xxx....x... 72M 58/72 80.6% 72/94230402 0.0% 0/72 0.0% 98746610 91467945 +3095 chr4 + 190214555 171644214 171644213 171644282 69 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAATATAT chr4 - 94230402 59607269 59607268 59607337 34623066 34623065 34623134 69 AAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAAAATCTGT ....::.....xxxx:.x.:.......:...x:.:......:......xx.........x.....x.:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 112036945 78177610 +3178 chr4 + 190214555 171644216 171644215 171644284 69 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAAAATATATAT chr4 - 94230402 59607269 59607268 59607337 34623066 34623065 34623134 69 AAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAAAATCTGT ....::.....xxxx:.x.:.......:....:.:......:......xx.........:..x..x.:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 112036947 78177608 +3017 chr4 + 190214555 171644229 171644228 171644267 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 102206490 88008065 +3000 chr4 + 190214555 171645975 171645974 171646017 43 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAAGG chr4 - 94230402 6438506 6438505 6438548 87791855 87791854 87791897 43 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGG ....:.....:.....::............::.:......:.. 43M 35/43 81.4% 43/94230402 0.0% 0/43 0.0% 165207469 25007086 +3021 chr4 + 190214555 171656349 171656348 171656396 48 ATTATTTTTAAATTTTAAATTTCTCTTTTTCACTTTTTAAACTTTTTT chr4 - 94230402 3791847 3791846 3791894 90438509 90438508 90438556 48 ATTATTTTCAGGTTTCAATATTTTCTTTTTCATTTTTAAAACTTTTTT ........:.::...:..xx..:.........:....x.......... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 167864502 22350053 +3513 chr4 + 190214555 171657060 171657059 171657130 71 ATGTATATATAATATATATTATATGTATGTATATACACACATACCTATATACATATGTATATACATATGTA chr4 - 94230402 49414733 49414732 49414803 44815600 44815599 44815670 71 ATGTTTAGTTAATTTATATTGTGTGTATGTGTAGACAGATATACACACATCCATATGTATGCACACACATA ....x..xx....x......:.:.......:..x...x.:....x:.:..x.........::...:.::.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 122242327 67972228 +3593 chr4 + 190214555 171657082 171657081 171657174 93 ATGTATGTATATACACACATACCTATATACATATGTATATACATATGTACGCATACATACATATGTATATACACACACGCATACATATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAAC----------ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:.....:.:::..:.x..----------......x..........:..x.....xx...:::.:.:........:x.:...x...x... 22M10D61M 61/83 73.5% 83/94230402 0.0% 10/83 12.0% 163261294 26953261 +3743 chr4 + 190214555 171657213 171657212 171657333 121 CGTATATATGCGTATATATGTATATATGTATATATGTATACGTATATATGCGTATATATGTATATATGTATATATGTATACGTATATATACACATATATGTATATATGTATATATGTATAT chr4 - 94230402 73121100 73121099 73121216 21109187 21109186 21109303 117 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACG----TATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ...:.::....:...x:..::.:....::.:.x.x.:..:x...:...:.----....x...:.::x......:..x:...:....x....:.x:.:.x:x.:.:.::.:....x.:.x.. 50M4D67M 73/117 62.4% 117/94230402 0.0% 4/117 3.4% 98536113 91678442 +3151 chr4 + 190214555 171657277 171657276 171657357 81 TATGTATATATGTATACGTATATATACACATATATGTATATATGTATATATGTATATGTATATATACACATATGTATATAT chr4 - 94230402 17853465 17853464 17853545 76376858 76376857 76376938 81 TATCTGTTTATATGCACATATGTATACACAAGTAACTCTGTATGCATACATGTATTTTTGCATATGTAAAGAAGTATGCAT ...x.:.x...:.::..:...:........x:..xx.x.:....:...:......x.x.::....::.x.x.x....::.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 153803812 36410743 +3074 chr4 + 190214555 171657289 171657288 171657369 81 TATACGTATATATACACATATATGTATATATGTATATATGTATATGTATATATACACATATGTATATATACACATATACAT chr4 - 94230402 8395789 8395788 8395869 85834534 85834533 85834614 81 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAAT .:.::....:.:.:..:.x.:......x..::...:....:x..::.xx...:.....:.:::.:.:.x.....x..:x.. 81M 51/81 63.0% 81/94230402 0.0% 0/81 0.0% 163261500 26953055 +3070 chr4 + 190214555 171657310 171657309 171657379 70 ATGTATATATGTATATATGTATATGTATATATACACATATGTATATATACACATATACATGTATATATAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ....::....:...x....x.xx...x........:...::..:.x.:.x...x.:...::...x..:.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 147521117 42693438 +3114 chr4 + 190214555 171657310 171657309 171657392 83 ATGTATATATGTATATATGTATATGTATATATACACATATGTATATATACACATATACATGTATATATACACATATATGTATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ....:.:.....:.::..:x.:......x..:.:.::....:x..:..xx.:.:.:...:::.:.:.:.x...:.x...x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 163261522 26953033 +3330 chr4 + 190214555 171657316 171657315 171657416 101 ATATGTATATATGTATATGTATATA-TACACATATGTATATATACACATATACATGTATATATACACATATATGTATATATGTATATATACGTATATATGTA chr4 - 94230402 36188526 36188525 36188626 58041777 58041776 58041877 101 ATATGTGTATGTGTCTG-GTATTTACTGCAGATATGCTTCTGGATATACATACATGCTCACATACAAATAGATGTGTATATGTAAACTGACTTACGTAAATA ......:...:...x.:-....x..-.:..x.....:x.x.:x.:.:.:.......:x:.:.....x...x....:........x.:xx..x..::..x:.. 17M1D7M1I76M 69/100 69.0% 101/94230402 0.0% 2/100 2.0% 135468790 54745765 +3422 chr4 + 190214555 171657353 171657352 171657454 102 TATATACACATATACATGTATATATACACA----TATATGTATATATGTATA--TATACGTATATATGTATATATGTATATATACGTATATATGTATATATGTATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::.::.....x...::.:.........----:..:x...:...:.....--..:...x:.......:x:..::....x.....:x:.:.x:x.:.:.::.:.... 30M4I18M2I54M 67/102 65.7% 108/94230402 0.0% 6/102 5.9% 98536251 91678304 +3193 chr4 + 190214555 171657358 171657357 171657445 88 ACACATATACATGTATATATACACATATATGTATATATGTATATATACGTATATATGTATATATGTATATATACGTATATATGTATAT chr4 - 94230402 64944124 64944123 64944211 29286192 29286191 29286279 88 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATAT ...:.x....:.:..x...x.:...x............x.:.:x:xx:....x.x.x...x.:.:...::x.x:.::.:......... 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 106713234 83501321 +3055 chr4 + 190214555 171657376 171657375 171657450 75 ATACACATATATGTATATATGTATATATACGTATATATGTATATATGTATATATACGTATATATGTATATATGTA chr4 - 94230402 54293154 54293153 54293228 39937175 39937174 39937249 75 ATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..:.....x...............:.:..:.xxx:......x.xxx...:.:.:x.:::..:.:::......:.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 117364222 72850333 +3092 chr4 + 190214555 171657415 171657414 171657502 88 TATATATGTATATATACGTATATATGTATATATGTATATATACGTATATATGTATATATGTATACATACACATACACGTATATATGTA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA ......:x:..xx....:..x......::..:x:.....x..x.......:....xx.x:x.xx:x.:.....:..x:..:....:.. 88M 58/88 65.9% 88/94230402 0.0% 0/88 0.0% 158854629 31359926 +4244 chr4 + 190214555 171657499 171657498 171657609 111 TGTATATACGTATACATACACATATACACATA--TATATGTATATACGTATACATACAC--ATATATGTATATACGTATACATACACATATGTGTATATACGTATACACACACAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ...::..:.:...x................x.--:..:x...:.........x:.....--:.......:x:...:....x....:.x:.::x:x.:.:..:.:..:.x:..x.. 32M2I25M2I54M 77/111 69.4% 115/94230402 0.0% 4/111 3.6% 98536397 91678158 +3027 chr4 + 190214555 171657718 171657717 171657809 92 ATACATACACATATATGTATATATGGATATATACATATATACGTATATATAAATACATATATACACATATATACACATACATACATACGTAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x::.:...:xx:....:.:...x.:.x:.::::.x...:.:.:..:..x:.:.x:.....:x..x..:.x.........x..:....:. 92M 56/92 60.9% 92/94230402 0.0% 0/92 0.0% 143714181 46500374 +3080 chr4 + 190214555 171657986 171657985 171658046 61 TGTGTATATACATATGTATGCATACATACGTATGTATATATGTATGTATATGCATATGTAT chr4 - 94230402 19637123 19637122 19637183 74593220 74593219 74593280 61 TGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCAT ..x:..x..:.....:x..xx...:....:...x...x....:....x..........:.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 152020863 38193692 +3109 chr4 + 190214555 171748173 171748172 171748234 62 AAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAATAAAAAAAGAAAA chr4 - 94230402 83504223 83504222 83504284 10726119 10726118 10726180 62 AAAAAAAAAAAAAACGGGGGGAGGAGAAAAAAAAGGGGGGGGGAAACAACAAAGAAATAAAA ..............x.::::..::......:...:.::::.::...x..:...:...x.... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 88243950 NA +3432 chr4 + 190214555 171798846 171798845 171798923 78 TTATATGAATATAAGTATATATTTATGTATATATGTATACATATATGTATATAAGTATATATGTATATATGTATACAT chr4 - 94230402 52481235 52481234 52481312 41749091 41749090 41749168 78 TTACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATAATCAT ...:...:.......::..:..x........:..::::.....:xx:....x.xx.....:...:.x...:..xx... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 119317611 70896944 +3663 chr4 + 190214555 171821111 171821110 171821177 67 CTGCAGCCTCAGTCTCCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:.....:x.:x..:.....:.....::x.:.x.xx.x.........:...........:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 153623985 36590570 +3280 chr4 + 190214555 171852991 171852990 171853162 172 CGCCGCCACCACGCCCGGCTAATTTTTTTTTTTTTTTTTTT--TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTTTTGATCTCCTGACCTCGTGATCC----GCCCGCTTCAG--CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC chr4 - 94230402 687920 687919 688088 93542315 93542314 93542483 169 CGACATCTCCACTTCTGCCTAATCTTTTTTTTTTTTTTTTTCCCCTTTTAGTTTGTAGAACAAA--GAGTTTATTCATTTTGTCCAGAGTTCTCCTGTTCTGCAGACCTCGT--TCCCAAAGCCCGCGTCCGGCACGCTCACGGTACAGAGCT-------GTCAGCCTCTGCAAACAGCC ..x.::.x....x:.:.x.....:.................--::...xx:...x...x.x.:.--.:....xx:.:.x..:x....::.xx.::..x...x.x........--...----......x..x.--x.x.:..x:..:.x.:.x.-------..x....x.:..:xx..... 41M2I21M2D46M2D3M4I11M2I19M7D20M 109/161 67.7% 169/94230402 0.0% 19/161 11.8% 171165071 19049484 +3191 chr4 + 190214555 171874980 171874979 171875046 67 AGGCAAAAACAAAACAAAACAAAAAACAACAACAACAAAAACTATCACCATGAAATAGCTTTACATA chr4 - 94230402 55605339 55605338 55605393 38625010 38625009 38625064 55 AGAGGAAAACAAAACAAAACAAAAAACACCAACAACAAAA------------AAACAGCTCTGCACA ..:x:.......................x...........------------...:....:.:..:. 40M12D15M 47/55 85.5% 55/94230402 0.0% 12/55 21.8% 116269641 73944914 +3289 chr4 + 190214555 171969845 171969844 171969923 79 CTGCAACCTCCGCCTTCAGAGTTTAAGTGATTCTCATGCCTCAGCCTCCCAAATAGCTGGGATTATAAACATGTGCCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:..:..:xx:x....x.:...:.....x...x..x.x........::...:.......:.:..:--..:..::.... 66M2D11M 54/77 70.1% 77/94230402 0.0% 2/77 2.6% 153772719 36441836 +3027 chr4 + 190214555 171970447 171970446 171970549 103 TAAAATGACAGAAATCTGGATGCTATGGACATAATGTCTTTCCTTCCATGTATATTTGATAAATTTCATATCAGTTTTCAAGATAAAAATCTTATCTTAAAAA chr4 - 94230402 20258259 20258258 20258361 73972042 73972041 73972144 103 TGAAAGGGGTGAAATGTTAATGGTTAGGACATGATGCTTTTACTTCCATGAAGAGTTAACAGCTTTTTTTTCCTTTTACATATTATAATTCCTGTTTTAAAGA .:...x.:xx.....x.x:...x.xx......:...::...x........x.x.x..:.:.:x...:x.x..xx...x..x:x..x..x..:.:.:.....:. 103M 66/103 64.1% 103/94230402 0.0% 0/103 0.0% 151712188 38502367 +3012 chr4 + 190214555 171991713 171991712 171991765 53 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATACACATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:....:.x:...x..:.:.:.::.:...:.:.. 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 101009084 89205471 +3407 chr4 + 190214555 172042792 172042791 172042889 98 GCTCACTGATTACATCAACTTTTGGCACTGCTCCAAGTTTTTACCTTGTTCTATCCGAGCAATCTTTAACAGTAAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 75131763 75131762 75131860 19098543 19098542 19098640 98 GCTCACTGATCACAGCAAACAAAAACACTATTTTGAATTTTCATTTTTTTCATTGTTTATAAGCCCTGAAAGGAAAAAAAAAAGAAAAAAAGAAAAGA ..........:...x...x:xxx::....::.:::.:....:.::..x...xx.x:xx::..x.::.:.x..x..........:.......:....:. 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 96911029 93303526 +3327 chr4 + 190214555 172057700 172057699 172057773 74 TCAAAAAAAAAAA----AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAAATCAAGTTTTTATT chr4 - 94230402 59607267 59607266 59607344 34623059 34623058 34623136 78 TTAAAAGGAAAAATCCTGACAGAAAAAAAGAAATGTGTATATACATATATCAATATATATAGAAAATCTGTTTTTTTT .:....::.....----:.x.:.......:....:.:......:......xx.........x...x:xx......x.. 13M4I61M 56/74 75.7% 78/94230402 0.0% 4/74 5.4% 112450433 77764122 +3420 chr4 + 190214555 172057711 172057710 172057786 76 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATA---AATCAAGTTTTTATTCATCTTGTATTCA chr4 - 94230402 69437739 69437738 69437816 24792587 24792586 24792664 78 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGTAATTCTGTTCTTTCTCACACTGTTTTCA .........x........:x...................x.-..:...---...:xx...:..x:...:x:...x.... 41M1D6M3I28M 60/75 80.0% 78/94230402 0.0% 4/75 5.3% 102619972 87594583 +9313 chr4 + 190214555 172076223 172076222 172076626 404 CATAGATAGCTAATGCCACTTTATTGCTGCTGGTCCTATTCAGCATCTCTTTTCACAGAATGCAATCTACATAATTAGAAAATAGCATGACTTCTGAATCTGGCACATCAGGAGGGTAAAGATGTCGTACTCTTGCTTTCATTTCATATGCCAACCTTTGTAACACTGATGGGATAATAACATTCTTTCAATTTTATAATGGTAATAGGTGTACTGAATTGTGT---TGCTGGAAGTACGAATGAAACAAAGGGAAGATATGAATTTATTAATACAAG-AAAACATAAGATTCAAGTTAGTTATCAAATAAAATTAAAAAAACATTTTGTATTGCAGAAAATCGCCACATCTGTACTGTCACT--AAAAATAATTGCAAGACATGTGAGACAAATAGCATGCTTTTTATA chr4 - 94230402 49925753 49925752 49926117 44304286 44304285 44304650 365 CACAGGTACTCAACCCCACTTTATCACTCCTGGTCTTATTCCATATCTCTGCTCCCAGGACAGCAGCTATGCAATTAGCAAATGGCA----------------------------GCAATGTTCTC-------------CATTTTGCATACCAACTTTGGGAACACTGATGCGATAATAGCACACTTTCAATTTGCTAATGGTAGCGGGTGCAGTGAATTCTTTGTGCGGTACAATCATGTATGAAACAAAAGAAAA--CTGAATGTATGAAGATTAGTGAAGCCTCACATTTAGCTTAAATGTCATGC-AAATTTTTAAAATGTTAATTATTGAAGACAATCACAATAGCCATTCTGCCACCTGCAGAGTAAATGCCAG-CAAATCAGACAAGTACTGAACTTTTTTTA ..:..:..x::..:x.........::..x......:.....x::......x:..x...:.::xx.x...:::......x....:...----------------------------.:..x.x.x..-------------.....:::..:.....:..x.x..........x.......:..:x..........xx........:::....:.x......x.x.---:.x.:x..x:.:.x..........:.:..:--x.....x...x..x.:x..-:..:.x.x.x...:.:x...:x.:...x::-.....xxx....::..xxx.....x...x....:.x.:.x.::.x...:...:--x.:.:...x...x..-..x:.x......:..x::x:......x.. 87M28D11M13D85M3I30M2D19M1I30M1D53M2I15M1D29M 242/359 67.4% 365/94230402 0.0% 51/359 14.2% 122150470 68064085 +3030 chr4 + 190214555 172087416 172087415 172087478 63 GCCTGGGCAACAGAGTTAGACTCCATCCCAAAAAAAAAAAAAACAAAAAAAACAAAAAAAACA chr4 - 94230402 66785714 66785713 66785776 27444627 27444626 27444689 63 GCATTAACAATACAGTTGTATTTCCTACCAAAAAACAAACAAACAACAACAACAAAAAAAACA ..x.x::...:.x....:x.:.:.x.x........x...x......x..x............. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 105301702 84912853 +3405 chr4 + 190214555 172096037 172096036 172096152 116 TTTGTTTATTTTGCTGTCATATTTTCGATTTCTCTCTCTCTCTCTTTCTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTTTAAGAGACAGGGTCTTATTCTGTTGCCCAGGCTG chr4 - 94230402 60208487 60208486 60208586 34021817 34021816 34021916 100 TTTGATGGCTTTCCTGTCTTCATTTTGAATCTTTTCTCTCTCGCTGCGTGTGTGTGTCTGTGTGTGTG-----ATGTGGCCT-----------GTTCTATTTTGTTGCTCATATTG ....x.x::...x.....x.xx...:..x.::.:........x..x:x.........x..........-----.....xx:.-----------..::....:......:..x::.. 68M5D9M11D23M 72/100 72.0% 100/94230402 0.0% 16/100 16.0% 111887550 78327005 +3211 chr4 + 190214555 172118697 172118696 172118746 50 CTCAAAACAAAAAAGAAAAAAAAAAACC-AAAAAACAAACAAACAAAAAAC chr4 - 94230402 65284342 65284341 65284392 28946011 28946010 28946061 51 CTCAGTCCAAAAAAAAAAAAAAAAAGCCTAACAAACAAACAAACAAAAAAC ....:xx.......:..........:..-..x................... 28M1I22M 44/50 88.0% 51/94230402 0.0% 1/50 2.0% 106834355 83380200 +3102 chr4 + 190214555 172118709 172118708 172118746 38 AAGAAAAAAAAAAACCAAAAAACAAACAAACAAAAAAC chr4 - 94230402 17429026 17429025 17429063 76801340 76801339 76801377 38 AAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAAC ..........x...x....................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 154689683 35524872 +3042 chr4 + 190214555 172131391 172131390 172131443 53 TCACCATGCCTTTAAAATATATATATATATATATATATACACACACACACACG chr4 - 94230402 57303996 57303995 57304048 36926355 36926354 36926407 53 TTATCATAATTTTAGAGAATATATATATATATGCATATTCGTACACACACACG .:.:...:x:....:.:x..............::....x.::........... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 114827395 75387160 +3548 chr4 + 190214555 172138398 172138397 172138546 149 TTCCTTCATTTTCCTTTTTTTTTGCCAACTATCTC----AGAGTCAAATTTGATGTCTAATTATATTAATTTACTTGGAC-------------------TGCCTATA---TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4865344 4865343 4865518 89364885 89364884 89365059 175 TTCTTTTTTCTTTTTTTTTTTTTGGTAAATATTTCTTAGAAAATAAAATTAAAATGTTAAAGCAATTCGTTTAACTGATTCTTTAAAAAAAGAACAACGTTCTTGTAAAGTAAAAATATATATATATATCTGGAAATAGAGAATCTTTTTTTTTGTTGTTTTGTTTTTTTTTTCT ...:..:x.:..::..........x:..x...:..----.:.:.x.....x:.xxx:...xxxx...x:....x:..:x:-------------------.x.:.:..---..x.x..............x.:x.x...x.x.x.:.........x..x....x..........:. 35M4I41M19I8M3I65M 102/149 68.5% 175/94230402 0.0% 26/149 17.4% 167273054 22941501 +3183 chr4 + 190214555 172138472 172138471 172138533 62 ACTGCCTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735342 92735341 92735403 1495000 1494999 1495061 62 ACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..:x.:.::....x.....:...:..:.:..........x.x..:.x.........:.x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 79403130 NA +3231 chr4 + 190214555 172138473 172138472 172138539 67 CTGCCTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 4200261 4200260 4200327 90030076 90030075 90030142 67 CTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTT ..:..x:..x.xx..x............:.:.:..............::...:xxx.......x... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 167938212 22276343 +3032 chr4 + 190214555 172138478 172138477 172138528 51 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681933 8681932 8681983 85548420 85548419 85548470 51 TAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..x..........:...::.:.:.:...:.....xx.:............. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 163456545 26758010 +3297 chr4 + 190214555 172138478 172138477 172138530 53 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681931 8681930 8681983 85548420 85548419 85548472 53 TATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ....x..........:...::.:.:.:...:.....x:.:............. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 163456547 26758008 +3282 chr4 + 190214555 172138480 172138479 172138535 56 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x....:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 79403132 NA +3496 chr4 + 190214555 172138482 172138481 172138537 56 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:...............:.x.........:.x... 56M 45/56 80.4% 56/94230402 0.0% 0/56 0.0% 79403134 NA +3282 chr4 + 190214555 172138484 172138483 172138539 56 TATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:........x......:.x.........:.x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 79403136 NA +3068 chr4 + 190214555 172138486 172138485 172138541 56 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:......x.x......:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 79403138 NA +3038 chr4 + 190214555 172138487 172138486 172138548 62 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 56681943 56681942 56682004 37548399 37548398 37548460 62 ATATATTCACATATTCACATACATATGTAAGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTG ......x:.:....x:.:...:....:.xxx.......x...x...x....x.......... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 115456544 74758011 +3175 chr4 + 190214555 172138488 172138487 172138563 76 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGCAATCTCGCT chr4 - 94230402 92735348 92735347 92735423 1494980 1494979 1495055 76 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTCCATGTGGCT .::....x.....:...:..:.:....x.x.x......:.x.........:.x...:::...:x.x.x..x.x... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 79403140 NA +3093 chr4 + 190214555 172151163 172151162 172151246 84 AATGCAAAATAATAAAAAAGTAAGATCTTAGAAGGAAATGGCTAAGAGAAATAAAGTCATGAAAAAGAAAATATATATTCTAAG chr4 - 94230402 65672791 65672790 65672874 28557529 28557528 28557612 84 AATGCACATTAATTGATGACAAACATATTAAAAGAAAATTCTCAAGAATAAAATAATTTTGAAAAAGAAACAATATATTTTAAG ......x.x....x:.x:.xx..x..x...:...:....xx::....:x..x.x.:.:x...........xx.......:.... 84M 58/84 69.0% 84/94230402 0.0% 0/84 0.0% 106478372 83736183 +3172 chr4 + 190214555 172152684 172152683 172152762 79 CTGCAACCTCTGCCTCTTGGGCTGGAGTGCTCCTCCCAGCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x..::....:.x:......:.x.xx:.........::...........:.:....--.::x...... 67M2D10M 53/77 68.8% 77/94230402 0.0% 2/77 2.6% 153955558 36258997 +3541 chr4 + 190214555 172172273 172172272 172172355 83 CTGCAACCTCTGCCTCCTGGGTTCCAGTGATTCTCCTGCCTCAGCCTCTCAGGTAGCTGGGACTACAGGCACTCGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:........x....x...x.xx.x........:...:........:......--.::x.:....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 153975147 36239408 +3050 chr4 + 190214555 172177747 172177746 172177796 50 ATATATATGTGTGTATATATATGTACACATATATACACATGTGTATATAT chr4 - 94230402 64433213 64433212 64433262 29797141 29797140 29797190 50 ATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTAT ..x.x.x...............x........:.:..:...::....:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 107744534 82470021 +3004 chr4 + 190214555 172177752 172177751 172177786 35 TATGTGTGTATATATATGTACACATATATACACAT chr4 - 94230402 10898955 10898954 10898989 83331414 83331413 83331448 35 TATGTGTGTATATATATATACACATATACACACAT .................:..........:...... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 161278797 28935758 +3115 chr4 + 190214555 172177767 172177766 172177878 112 ATGTACACATATATACACATGTGTATATATATACACACACATATATGTGTGTGTATATATACACACACATATATATGTGTATATATATACACACATACTAAGGCATGCTAAT chr4 - 94230402 89016082 89016081 89016185 5214218 5214217 5214321 104 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACAT--------GCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCAT ....:....:..x.:..:::::::.:.::.x.:.:......:..--------.:.x..::.:....::.x..:.:....:.x.:.:x.:.:....:..x:.x..:...:x.. 44M8D60M 62/104 59.6% 104/94230402 0.0% 8/104 7.7% 83161685 NA +3357 chr4 + 190214555 172177775 172177774 172177846 72 ATATATACACATGTGTATATATATACACACACATATATGTGTGTGTATATATACACACACATATATATGTGT chr4 - 94230402 38535895 38535894 38535966 55694437 55694436 55694508 72 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAGGAGCATCTGT ...........:..::..:x:x.......:...:.:......:.....::.....x:x...x:x::..x... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 133641880 56572675 +3144 chr4 + 190214555 172201293 172201292 172201355 63 GCCTCTGGGATTCAAGCAATTCCCCTGCCTCGGCCTCCCAAGTTGCTGGGACTACAGGTGCAC chr4 - 94230402 18197138 18197137 18197199 76033204 76033203 76033265 62 GCTTCTGGG-TTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:......-......::x...x.xx.x...:....::.....x.....:......x...... 9M1D53M 48/62 77.4% 62/94230402 0.0% 1/62 1.6% 154004155 36210400 +3065 chr4 + 190214555 172206776 172206775 172206843 68 TTTTTTGTTTTGTTTTGTTTTGTTTTTCTGTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 87469861 87469860 87469928 6760475 6760474 6760542 68 TTTTTTGCTTGCTTTCTTCGTGTTTTGGGGGTTTTTTTGTTTGTTTTGTTTTGTTTTTGAGAGAGAGA .......:..xx...:x.:x......xxx.x................x....x.....xx....x:.. 68M 51/68 75.0% 68/94230402 0.0% 0/68 0.0% 84736915 NA +3079 chr4 + 190214555 172295518 172295517 172295568 51 TTTCTTTTTTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTGGTAACTAGCTA chr4 - 94230402 48640840 48640839 48640890 45589513 45589512 45589563 51 TTTTTGTTTTTTGGTTTTTGGTTTTTTTTTTTTTCCTGTGGTAAGTAGCTA ...:.x.....x.......xx.............::.x......x...... 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 123654678 66559877 +3026 chr4 + 190214555 172343134 172343133 172343167 34 AACAAAAAACAAACAAACAAAACAAAACAAAAAA chr4 - 94230402 83846371 83846370 83846404 10383999 10383998 10384032 34 AGCAAAAAACAAACAAACAAAACAAAACAAAAAA .:................................ 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 88496763 NA +3106 chr4 + 190214555 172357611 172357610 172357671 61 ATATGTATATATATATAGATATATACACACACACACACACACACACACACACACACACGGA chr4 - 94230402 8395808 8395807 8395868 85834535 85834534 85834595 61 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAA .:......x..:....:x..::x....:xx.:.................x.....x.:.:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 163961803 26252752 +3066 chr4 + 190214555 172361442 172361441 172361474 33 AAAACAAAAACAAAACAAAACAACAACAACAAA chr4 - 94230402 88287908 88287907 88287940 5942463 5942462 5942495 33 AAAACAAAAACAAAACAAAACAACAACAACAAA ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 84073534 NA +3344 chr4 + 190214555 172384564 172384563 172384653 90 ATTGTTTTTTTTTCTACTGTCTATTCATTAATTTCTACCCTTAATACTATTATTACCTTCTTTCTCATTGCTTTGTGTTGTTTGCATTTT chr4 - 94230402 66243918 66243917 66244006 27986397 27986396 27986485 89 ATTTTTCTCTCTTCTATCAACAGTCTTTCATTTTCTTCTTTTATTGCTATTATTACGTTCATCATCATCACTCTGCGTT-TTTGCGTTTT ...x..:.:.:.....:::x.x:.::x.:.x.....x.::...x.:..........x...x.:x....::..:..:...-.....:.... 79M1D10M 60/89 67.4% 89/94230402 0.0% 1/89 1.1% 106140646 84073909 +3202 chr4 + 190214555 172401881 172401880 172401969 89 TCCCTGGCTTCTGGAGGAGGAAGAGAGAGAGAGAGAGGGGGAGAGAGGGAGAGAGGGGGAAAGGGGGAGGGGGGAGAGAGAGAGAGAGA chr4 - 94230402 47816927 47816926 47817015 46413388 46413387 46413476 89 TCCATTACTTTGAGAGGGGGCAGCATGGGACAGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAA ...x.x:...:x:....:..x..x:x.:..x.....:..::.::.:x..x.:.:..::x.:x.....:......:.:....:.:.:.:. 89M 54/89 60.7% 89/94230402 0.0% 0/89 0.0% 124584954 65629601 +3022 chr4 + 190214555 172401894 172401893 172401971 78 GAGGAGGAAGAGAGAGAGAGAGAGGGGGAGAGAGGGAGAGAGGGGGAAAGGGGGAGGGGGGAGAGAGAGAGAGAGAGA chr4 - 94230402 47816938 47816937 47817015 46413388 46413387 46413465 78 GAGAGGGGGCAGCATGGGACAGAGAAGGAAAAGGGTGGTGGGGGGAATAGTGGGGGGGGGGGGGGGGAGAAAAAAAAA ...::..::x..x:x.:..x....::...:.::..x:.x.:....:.x..x...:......:.:.:....:.:.:.:. 78M 48/78 61.5% 78/94230402 0.0% 0/78 0.0% 124584956 65629599 +3591 chr4 + 190214555 172405391 172405390 172405456 66 TACTTATACTTGATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTT chr4 - 94230402 8681918 8681917 8681983 85548420 85548419 85548485 66 TATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ..:::..:::.......x..........:...::.:.:.:...:.....xx.x............. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 163723473 26491082 +3014 chr4 + 190214555 172405405 172405404 172405463 59 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 42757855 42757854 42757913 51472490 51472489 51472548 59 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTT ....:.:..x:.......:.:.x.......:.....x..:......::...x.x.x... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 129647550 60567005 +3305 chr4 + 190214555 172405405 172405404 172405458 54 ATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....xx.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 163723475 26491080 +3388 chr4 + 190214555 172405407 172405406 172405460 54 ATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 8681930 8681929 8681983 85548420 85548419 85548473 54 ATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT .....x..........:...::.:.:.:...:.....x:.:............. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 163723477 26491078 +3068 chr4 + 190214555 172405408 172405407 172405463 56 TATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735403 1495000 1494999 1495055 56 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .::....x.....:...:..:.:..........x.x..:.x.........:.x... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 79670060 NA +3351 chr4 + 190214555 172405410 172405409 172405467 58 TATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 92735348 92735347 92735405 1494998 1494997 1495055 58 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCC .::....x.....:...:..:.:..........x....:.x.........:.x...:. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 79670062 NA +3634 chr4 + 190214555 172405412 172405411 172405471 60 TATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTCTCCT chr4 - 94230402 92735348 92735347 92735407 1494996 1494995 1495055 60 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCT .::....x.....:...:..:.:...............:.x.........:.x..::... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 79670064 NA +3281 chr4 + 190214555 172405414 172405413 172405476 63 TATATATATATATATATATATATATATATATTTTTTTTTT-TTTTTTTTTTTTTCTCCTTGCAT chr4 - 94230402 92735348 92735347 92735411 1494992 1494991 1495055 64 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAAT .::....x.....:...:..:.:........x......:.-.........:.x.:...:..x.. 40M1I23M 49/63 77.8% 64/94230402 0.0% 1/63 1.6% 79670066 NA +3163 chr4 + 190214555 172439159 172439158 172439195 37 TTCTCTCTCCCCTTCACACACACACACACACACACAC chr4 - 94230402 81178147 81178146 81178183 13052220 13052219 13052256 37 TCCTCTCTCCCCTTCACACACACACACACATACACGC .:............................:....:. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 91261012 NA +3240 chr4 + 190214555 172443112 172443111 172443177 66 ATCCATATACATATATATATATATATATATATATATATATATATATATATATTTCTTTTTTTTTTT chr4 - 94230402 8681919 8681918 8681983 85548420 85548419 85548484 65 ATCCATGT-CTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ......:.-.xx.....x..........:...::.:.:.:...:.....xx.:.:........... 8M1D57M 50/65 76.9% 65/94230402 0.0% 1/65 1.5% 163761193 26453362 +3621 chr4 + 190214555 172443116 172443115 172443179 64 ATATACATAT---ATATATATATATATATATATATATATATATATATATATTTCTTTTTTTTTTTTT chr4 - 94230402 8681917 8681916 8681983 85548420 85548419 85548486 67 ATATCCATGTCTGATATAAATATATATATGTATGCACACACATACATATAACTCTTTTTTTTTTTTT ....x...:.---.....x..........:...::.:.:.:...:.....x:............... 10M3I54M 52/64 81.2% 67/94230402 0.0% 3/64 4.7% 163761199 26453356 +3001 chr4 + 190214555 172443129 172443128 172443180 52 TATATATATATATATATATATATATATATATATATTTCTTTTTTTTTTTTTT chr4 - 94230402 92735348 92735347 92735399 1495004 1495003 1495055 52 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .::....x.....:...:..:.:..........x...::.x.........:. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 79707781 NA +3315 chr4 + 190214555 172443131 172443130 172443183 53 TATATATATATATATATATATATATATATATATTTCTTTTTTTTTTTTTTTTG chr4 - 94230402 92735348 92735347 92735400 1495003 1495002 1495055 53 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG .::....x.....:...:..:.:............:..:.x.........:.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 79707783 NA +3825 chr4 + 190214555 172487225 172487224 172487369 145 TCCTTCCTTCCTGTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTT-----CCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTT chr4 - 94230402 91731750 91731749 91731898 2498505 2498504 2498653 149 TCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATT-TCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTT ..x..:...:...::..x.....:...::........:..:.....-----:.....:.x..-.:....:.:..x::..x.:x...x..x..::.:x...:::x:x...x..x:.x.:x::x..::.:x.:x...::.:..:.x.::... 46M5I11M1D87M 87/144 60.4% 149/94230402 0.0% 6/144 4.2% 80755475 NA +3294 chr4 + 190214555 172487252 172487251 172487419 168 TTCCTTCCTTCCTTCCTTTCCTCTTTCTTTCTTTCCTTCTTTCCTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTC--TTTTCTTTTCTTTTCTTTCTTTTTCTTTCTTGTCTCACT chr4 - 94230402 60352828 60352827 60352989 33877414 33877413 33877575 162 TTCCTTTCTGGATTTTTTCCATTTCTCCCTCCTGCCTTTGCACTGTTTGTC---------TTCTTCCTTGGTATTTTTGTTATTTATGTTGTTATCAATATTTCCTAATTCATTTTCTTCTGTTAGTTTCAATTGTTATTCCTTTTTTTTTTTTTTACTTCGCAACTCATT ......:..xxx..::..:.x.:.:..::..:.x....:x:x.:x.:....---------.....:...xx.x.:...x..-.:.x.x..x:.x..xx.x....:.xx:.:x...:.....x..xx....--..x.:x..:.....:...:.....x:...x::x....:. 51M9D21M1I48M2I39M 100/159 62.9% 162/94230402 0.0% 12/159 7.5% 112134424 78080131 +3128 chr4 + 190214555 172487322 172487321 172487415 94 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT-TCTTTTTCTTTCTTGTCT chr4 - 94230402 28866462 28866461 28866556 65363847 65363846 65363941 95 CTTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACCTTGATGTTT ...:..x..x..:....x.:::...:.:xx...:..:..x:x..:.:.......:..x:........xx.x.:...-.....:x.:..xx...:. 76M1I18M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% 143620860 46593695 +3500 chr4 + 190214555 172487342 172487341 172487427 86 CTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTTCTTTCTTGTCTCACTCTGTCGCC chr4 - 94230402 28866462 28866461 28866547 65363856 65363855 65363941 86 CTTCCTATCATTTTTTCGTCTCTTCCTCAGTTCCTTTCTATGTTTCCTCTTTTCCTTATTTTTCTTTGATGTCCTTCTCTTTCACC ...:..x..x..:....x.:::.....:xx..:....::x.x.:.::.......:..x.........xx....::x....x..:.. 86M 58/86 67.4% 86/94230402 0.0% 0/86 0.0% 143620880 46593675 +3376 chr4 + 190214555 172519464 172519463 172519526 63 TGAAAATCAATTACCTGAATGTTTTCTTTTTCTCTTTCCTTCTTTCTTTTTTTTTTTTTAATT chr4 - 94230402 47207616 47207615 47207678 47022725 47022724 47022787 63 TGAAAATCACTTTCCTGACATTCTCTACATTCTCTCTCTCTCTCTCTTTTTTTTTTTTTAATT .........x..x.....xxx.:.::x:x......:..::...:................... 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 125311848 64902707 +3450 chr4 + 190214555 172523441 172523440 172523513 73 TGCAACCTCCACCTCCTGGGCTCAAGTTATCCTCCCACCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:..:..:xx.x..:.....:......xx.:.x.xx:x........::::................x...... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 154326314 35888241 +3699 chr4 + 190214555 172528942 172528941 172529039 98 TTCCCAAAGGCATATATATATATGTGTGTGTATATTTATACATATGTGTGTATATATATATATATACACACACACACACACATATATATATATATCAA chr4 - 94230402 8395777 8395776 8395872 85834531 85834530 85834626 96 TTCCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGT--ATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAA .....x.:.x...:.:.:...:....::.:x.:..x...x:.:..:...--..::x..:..xx...................x.:.:.x..:x..x.. 49M2D47M 66/96 68.8% 96/94230402 0.0% 2/96 2.1% 164133165 26081390 +3386 chr4 + 190214555 172528954 172528953 172529033 80 TATATATATATGTGTGTGTATATTTATACATATGTGTGTATATATATATATATACACACACACACACACATATATATATA chr4 - 94230402 8395791 8395790 8395870 85834533 85834532 85834612 80 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:...:.:..::.:x::..:.x.x.........:..:x..:..xx...:.:.............x...:.x..:x... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 164133163 26081392 +4360 chr4 + 190214555 172574846 172574845 172574953 108 TGCATTTACATTTTCCAACAAATAAGATATATTTTTAGAGAGGTGCT-------CACACATGCAAGCGTG--CATGCATGCATGTGTATACACACGCACACATACACACACACACAC chr4 - 94230402 14964768 14964767 14964884 79265519 79265518 79265635 117 TGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .......::.:x:..x..x.:::..::.::....x..x.......:.-------..x.:...:xx.....--..::.:..:....:......xx.:.......:............. 47M7I16M2I45M 77/108 71.3% 117/94230402 0.0% 9/108 8.3% 157610078 32604477 +3385 chr4 + 190214555 172574893 172574892 172574977 85 CACACATGCAAGCGTGCATG--CATGCATGTGTATACACACGCACACAT----ACACACACACACACACACACACACACGATTAGAAAGTC chr4 - 94230402 8395787 8395786 8395877 85834526 85834525 85834616 91 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACC ..::::..:.x.:......:--....:..x.::...:::.:..x:....----.................x.....x.:..x..:...::. 20M2I27M4I38M 60/85 70.6% 91/94230402 0.0% 6/85 7.1% 164179106 26035449 +3058 chr4 + 190214555 172574894 172574893 172574959 66 ACACATGCAAGCGTGCATGCATGCATGTGTATACACACGCACACATACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x::.x.:x...:..::::..:......::.:.::..xx..:.....::............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 157610075 32604480 +3481 chr4 + 190214555 172580748 172580747 172580798 51 GATTTTTGTTTTGTTTTGTTTTAATTTTTTTGTTTGTTTGTTTGTTTTTGA chr4 - 94230402 21894905 21894904 21894954 72335449 72335448 72335498 50 GATTTTTGTCTT-TTTTGTTTCAATTTTTTTGTTTGTTTGTTTTCTTTTAA .........:..-........:.....................x:....:. 12M1D38M 45/50 90.0% 50/94230402 0.0% 1/50 2.0% 150685843 39528712 +3451 chr4 + 190214555 172582246 172582245 172582340 95 GGCTTTCGAATCGTAGCTATGCTCACTTAATAACTATGTGGCCTTGGGCAGGTTATTTAAACTTTCTGAGCCTTAGTTTCTCCATCTGTAAAATG chr4 - 94230402 11947192 11947191 11947276 82283127 82283126 82283211 85 GACTTCTGAATTGTC----------CTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG .:...::....:..x----------..:.x.....:....:....:..:x:..:.:....x..x:...x.:.::......:....x.:.:..... 15M10D70M 59/85 69.4% 85/94230402 0.0% 10/85 11.8% 160635054 29579501 +3473 chr4 + 190214555 172600949 172600948 172601002 54 AAATCTGAACCATAACCCAAAAACAAAAACAAAAAAAAATCAATAGGAACAAAA chr4 - 94230402 80551841 80551840 80551894 13678509 13678508 13678562 54 AAATCTGTACCATAAATTAAAAACAAAACCAAAAGACAATCAACAGGAAAAAAA .......x.......x::..........x.....:.x......:.....x.... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 92049108 NA +3194 chr4 + 190214555 172624248 172624247 172624285 38 TTTTTTGTTGTTGTTTTTGTTTTTTGTTTGTTTGTTTG chr4 - 94230402 17488401 17488400 17488438 76741965 76741964 76742002 38 TTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTG ...............x..:................... 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 155135847 35078708 +3103 chr4 + 190214555 172624261 172624260 172624308 48 TTTTTGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTAAAGCTGCTTTAT chr4 - 94230402 29751656 29751655 29751703 64478700 64478699 64478747 48 TTTTTTTTTGCTGTTTGTTTGTTTGTTTTTGTTTTAAATCCCTTTCAT .....x...x:...........................x.:x:..:.. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 142872605 47341950 +3341 chr4 + 190214555 172644255 172644254 172644351 97 ATGTGTGTATGAATGTATGAGTGAACACACACATATACATATACATATACACATACACACATACACACACACACAAACCTATGGTAACCACCATCTA chr4 - 94230402 8395788 8395787 8395884 85834519 85834518 85834615 97 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTA ...........x:..:..:.:::x::.:x:......::..::x:.:..xx.:.:.......:.......x.......:xx..::x..x.x.x.x... 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 164248467 25966088 +3135 chr4 + 190214555 172670459 172670458 172670524 66 TCTGTTCATGTTCTTTGTCCACTCTTTTTATGGTGTTGTTTGTTTTTTTCCTGTAAATTTGTTTAA chr4 - 94230402 91774295 91774294 91774360 2456043 2456042 2456108 66 TTTATTCAAGCACCCTGTCAGCTTTTTTGGTGGTTTTGTTGTTTTTTTTCTTTTAAATTTGTATAA .:.:....x.:x.::....x:..:....x:....x.....xx........:.x.........x... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 80896164 NA +3413 chr4 + 190214555 172708126 172708125 172708198 73 CTGCAACCTCTGCCTCCTGGACTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:....::.....::x...x.xx.x........::..................x.::.. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 154511000 35703555 +3073 chr4 + 190214555 172749064 172749063 172749117 54 AGGCTAATTTTTGTTGTTGTTGTTGTTTGTTTTTTTTTTGATAGAGAAGAAGTT chr4 - 94230402 28153545 28153544 28153598 66076805 66076804 66076858 54 AGGGTTTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTTCTGTTCATGTAGAATTT ...x.xx..............................:..x.x:x.x....x.. 54M 44/54 81.5% 54/94230402 0.0% 0/54 0.0% 144595519 45619036 +3184 chr4 + 190214555 172759766 172759765 172759840 75 TCCTGCACCTGCACTCTTTGAAATATTTATAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 63973604 63973603 63973678 30256725 30256724 30256799 75 TCCAGCTCTTGCATTTTTTGATTTGTTTAGAAGATTTTTTTTTTTAGTTTTTTTTCATCTTATTTTTGTCATTTT ...x..x.:....:.:.....xx.:....x.:xx...........xx........:x.:..x.....x.:x.... 75M 54/75 72.0% 75/94230402 0.0% 0/75 0.0% 108786162 81428393 +6400 chr4 + 190214555 172779920 172779919 172780178 259 GAAATGTGGGAGACATATATCTAATTAAAAAGTATTCGTTCCTCTGTTCTCAAACTAATGTGCTACGCCATTACTTCACTACATAATGAGTGAAACATTGGTGCAAAATTAGGCATCACCTTAGGACAGCATGAGCCATTAATCAAACAATAATTTTAAGGG------------TTGTCATGGAAGGAAGGTTCAGGTTTATTCTTGGCTTTTTTTTTTTTAAAGTAG-------------TGCAAGCTGCTAGGT-AGTGAAGCTCTGGAAAAAAGAAACATCA chr4 - 94230402 49699825 49699824 49700096 44530307 44530306 44530578 272 GAAGTATGGGAATTAATCATGAAAAAGGAAAGCATTC-----TCTGTTCATGGACTAATGTGCCATGATGATGCTCCTCTAAATAATGAGGCAAATACTGATGCATAATTAGGCATCTCCTAACATCAGAATGAGCTATTAATCAAACAATAACACCATGTGAGGTTTTTTTTCTTTTTACTGAGTAGAGGATTGG-------CTTTTCACTTTTTATTTTAAACCAGAAAATAGCAAATAAATAAGCTGCTGCATAAATCAAGCTTTAG-GAGAGGAGACATCA ...:.:.....:x:.xx:..xx..xx::....:....-----.......x:::..........:.:.x::x.:..:.x...x........xx...:.:..:....x...........x...x.x:x...x......:................:x::.x.x.------------..x.:.:x..:x::...x.::.-------...xx.x:.....x.......x:..-------------x::........:x:.-.:.x.....:.:.-:.:.:..:...... 37M5D120M12I22M7D25M13I15M1I13M1D14M 166/246 67.5% 272/94230402 0.0% 39/246 15.9% 123080095 67134460 +3154 chr4 + 190214555 172802792 172802791 172802834 43 AAAAAACAAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 37057561 37057560 37057603 57172800 57172799 57172842 43 AAAAAACAAACAAACCACAAAACAACAACAACAAGAACAAAAA ...............x.xx...............x........ 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 135745231 54469324 +3331 chr4 + 190214555 172802793 172802792 172802843 51 AAAAACAAACAAACAAACAAACAACAACAACAACAACAAAAACGAGTAATC chr4 - 94230402 28228775 28228774 28228825 66001578 66001577 66001628 51 AAAAACAAACAAACAAAAACTCAACAACAACAACAACAAACATAAGCTATC .................x.xx...................x.::..:x... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 144574018 45640537 +3226 chr4 + 190214555 172802799 172802798 172802834 36 AAACAAACAAACAAACAACAACAACAACAACAAAAA chr4 - 94230402 79230836 79230835 79230871 14999532 14999531 14999567 36 AAACAAACAAACAAACAATAACAACAACAACAAAAA ..................:................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 93571963 NA +3218 chr4 + 190214555 172845197 172845196 172845312 116 GCAGAGCGAGTCTCTGTCTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAACA--GAAAAAGATTCACCTTATTCACATACTCATGAGAA------TCAATTGCGTAAAAAACTCCTATT chr4 - 94230402 83671940 83671939 83672053 10558350 10558349 10558463 114 GCAAAACGCTGCTTTGTGTCAAGACAAGAAAAAAATAAGGAAAAGGAAAAAAAAACAATGGAAAGCATG----------AAATGCAAAAGAGAAGGTATTTTAATTGCATGTAAAAATCATATT ...:.:..xxx..:...x....:.x..:.......x...:.....:....:......--.:...:x..x----------.x..:.xx.x.....------.:......:.:x....x..x.... 57M2I10M10D15M6I24M 77/106 72.6% 114/94230402 0.0% 18/106 17.0% 89173257 NA +3196 chr4 + 190214555 172895250 172895249 172895426 177 CTTTGTAGCTCTTCTTTTCCCTTCTTCCATTTTTCCTGTCTTTGTGGTTAAGTGATTTGCTCTGATAGTATTTTTCATTTGTTGCTTTTTACTTTAGTGTATATATTATACACTTTTCATTTTTAGTGTTTTTGTTATATATATATATATATATTTTTTTTTTGCTTTCAGCACTCT chr4 - 94230402 69435951 69435950 69436123 24794280 24794279 24794452 173 CCTTCAAGCTCCTCTTATTCTTTCTTGTTTCTTTTTAACCCTAATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTT----TACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCT .:..xx.....:....x.:.:.....x:x.:...::x::.:.x:.x...x....x:..x:...:x..x:.....:..x:....x..::x.:...:xx:x:..:.x..x:x..:..::.x..:.:x.x::.:..x.----..:x:x.x.x:x:.:.:.x.....x.....xx...... 135M4D38M 98/173 56.6% 173/94230402 0.0% 4/173 2.3% 103459299 86755256 +3000 chr4 + 190214555 172905802 172905801 172905852 51 AGAGATCACTCAAAAAAAAAAAAAAAAAAAAAAAAGGAGAACAAGAAACGG chr4 - 94230402 79828826 79828825 79828876 14401527 14401526 14401577 51 AGAGCTCTCTTAAAAAAAAAAGAAAAAGAAAAAAGGGGGGAAAAAAAGTGG ....x..x..:..........:.....:......:..:.:.x..:..::.. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 93076976 NA +3814 chr4 + 190214555 172940438 172940437 172940511 74 CTGCAACCTCTGCCTCTGGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..::x...........x...x.xx.x........::...........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 154743312 35471243 +3343 chr4 + 190214555 173020324 173020323 173020383 60 TAGAATGGTATAATATGATAGAATGGGATAATATAATAGAATGGGATACATAATAGAATT chr4 - 94230402 31259598 31259597 31259657 62970746 62970745 62970805 60 TGGAATGGAATAGTATAATAAAATGGAATAATATAATAAAATGAGATTCAGTGTAAGACT .:......x...:...:...:.....:...........:....:...x..xx:..::.:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 141760726 48453829 +3032 chr4 + 190214555 173022086 173022085 173022202 117 GGAAAGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAAAGAGAGAGAGAAGGCAGGAAGGCAGGAAGGGAGAGAGGGAGGGAGGGAGGAAGGAAGGAA chr4 - 94230402 60249506 60249505 60249622 33980781 33980780 33980897 117 GGATAGGAAAGGGAGGGGAAGCACAGAAGAAAGGAATGAAGGATAGAACCAAGGACAGAATAAAAAGATGCTTGCAGGAACAAAATGACCAGAGAATTTGAGGTGAGAAAGTAGAAA ...x..:.::::.:::.....x.x.....:......x......x....xx.....x.::.x.:.:...x.x:x.x.:.:xx::..x.:xx....::xxx....x::...:.x..:.. 117M 69/117 59.0% 117/94230402 0.0% 0/117 0.0% 112772580 77441975 +3090 chr4 + 190214555 173070508 173070507 173070614 107 GAGCCTGCAGCCTGTGTCCATGGGGTT--GGCCTGTGATATATGCCCCTGTACTGGGGTAGGCCTAGAGCCTGAGTTCATAGGGGTGGGTGTGGGTCCACAGGGGCTGC chr4 - 94230402 93207484 93207483 93207588 1022815 1022814 1022919 105 GAGCGCAGACCCCATGGGCATGGTGTTCTGGTCTGAGGA----GCTCCTGTTCTGGGGAGGCTCTCAGAGCAGGGACCCTGGAGGTGGGGGGGGGTCCACAGGGGCTGC ....x::x.x..::..xx.....x...--..:...x.:x----..:.....x......x:.x:..x:::x.x.:.x:.x.:.:......x.x................. 27M2I10M4D66M 69/103 67.0% 105/94230402 0.0% 6/103 5.8% 79863024 NA +3610 chr4 + 190214555 173085028 173085027 173085111 84 CTGCAACCTCTGCCTCCCAGGCTCAAGCAATTCTCATGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGTGCCACCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:..:..:xx:x..:.::..:.....::x...x..x.x........::.............:....--.:..::....::... 67M2D15M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 154887902 35326653 +3120 chr4 + 190214555 173120830 173120829 173120910 81 TCCAAAGCTGATTTTCCAGCAAAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGACAACAACTT chr4 - 94230402 24074960 24074959 24075040 70155363 70155362 70155443 81 TCCAAATATGTAATCCCAGAAAAGAAATAATAGTATCAATTATAATATCAGTAATAATGAAAATAACAGCTGCAGTAAATT ......xx..xxx.:....x...:x.......:..x:...x......x:.:.......:.x.....:.::x:..::..x.. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 149045870 41168685 +3121 chr4 + 190214555 173167582 173167581 173167668 87 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAACCCCAAAAAACTTAGGATAAAATCTTAAAAC chr4 - 94230402 91489893 91489892 91489979 2740424 2740423 2740510 87 TCTGATAAATAAAATCATAGAAATAGAAAAAAATAAATAGAGCAAAAAAAAAAAAAACCCAAAAACAGAATGAGAGAATATTTAAAC ..x:.x...x....xx.x.:...x.:.......x...x.:.:x....:........x........xxxx.x..x.:...x..x.... 87M 61/87 70.1% 87/94230402 0.0% 0/87 0.0% 81677689 NA +3170 chr4 + 190214555 173167609 173167608 173167664 56 AAAAAAAAAAAAAAAGAAAAGAAAAAAAACCCCAAAAAACTT--------AGGATAAAATCTTA chr4 - 94230402 56024879 56024878 56024942 38205461 38205460 38205524 64 AAGGAAAAAAAAAAAGAAAGCAAAAAAAACCCCAAGAAACCTTGCTGGTGAGGATTAACTCTCA ..::...............:x..............:....:.--------.....x..x...:. 42M8I14M 47/56 83.9% 64/94230402 0.0% 8/56 14.3% 117142730 73071825 +3426 chr4 + 190214555 173197040 173197039 173197126 87 AGATTCTCTATCTCTCTCTCTCCCTTTTTTTTTTTTTTTTTTTTG---ACAGGTAAACAGAAGTAACTATCATTTGGGGTTGTCAAGATA chr4 - 94230402 50117644 50117643 50117724 44112679 44112678 44112759 81 AGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAGCAGATAACCAACAGTACCT---------GGTTTTCAAGTTA ...:.x.x...:x:........:..:...................---:...:...x..:x....x..---------....x.....x.. 45M3I20M9D13M 62/78 79.5% 81/94230402 0.0% 12/78 15.4% 123079396 67135159 +3013 chr4 + 190214555 173197050 173197049 173197084 35 TCTCTCTCTCTCCCTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 18929914 18929913 18929948 75300455 75300454 75300489 35 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTG ............:..:................... 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 154267136 35947419 +3033 chr4 + 190214555 173216696 173216695 173216754 59 GTGTACTATTCATATATATATATATATATATATTTTTTTTTTTTTTTTTTTGGAGACGG chr4 - 94230402 70265133 70265132 70265191 23965212 23965211 23965270 59 GTGGACTTTAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG ...x...x.xx......x...........:..x.:............::.:x..x..:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 102951563 87262992 +3067 chr4 + 190214555 173310811 173310810 173310884 74 CTGCAACCTCTGCCTCCCAGATTCAAGAGATTCTCTTGCCTCAGCATTCCAAGTAGCTGGGATTATAGGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::.:......x.x...x.xx.x......x..:...........:.:..:.x....:. 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 155113685 35100870 +3020 chr4 + 190214555 173317535 173317534 173317597 63 TAAACTGTAATATTTAACATGAAATGTTAAATTCTGATGCCAGAGTTCATCAAAAACTAAACT chr4 - 94230402 86949306 86949305 86949368 7281035 7281034 7281097 63 TAGACTGTCTTACAAAATTTAAAATGTTTAATTTTCATGCCAGAGTTTACAAGAAACTAAATT ..:.....xx..:xx..:x.:.......x....:.x...........:.:x.:........:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 86368229 NA +3026 chr4 + 190214555 173355699 173355698 173355746 48 CCATTTCCCCCTGACCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAATA chr4 - 94230402 22571651 22571650 22571698 71658705 71658704 71658752 48 CTATATTCCCCCCCCCCCCCCCAAAAAAAAGAAAAAAAAAAAAAGATA .:..x.:....:xx.......x........:.............:... 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 150784048 39430507 +3052 chr4 + 190214555 173355703 173355702 173355743 41 TTCCCCCTGACCCCCCCAAAAAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 22571656 22571655 22571696 71658707 71658706 71658747 41 TTCCCCCCCCCCCCCCCAAAAAAAAGAAAAAAAAAAAAAGA .......:xx...............:.............:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 150784047 39430508 +3402 chr4 + 190214555 173355721 173355720 173355784 64 AAAAAAAAAAAAAAAAAAAAAAAATAT--ATATATATATATATATATATATATATATATGTATGTA chr4 - 94230402 86407074 86407073 86407139 7823264 7823263 7823329 66 AAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA ..............:..x...:...x.--.x..x.x:.:.x......:.:................ 27M2I37M 52/64 81.2% 66/94230402 0.0% 2/64 3.1% 86948647 NA +3087 chr4 + 190214555 173355727 173355726 173355780 54 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATGTA chr4 - 94230402 69437739 69437738 69437789 24792614 24792613 24792664 51 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT---TACATAAGTA .........x........:x...................x.---..:...x... 41M3D10M 45/51 88.2% 51/94230402 0.0% 3/51 5.9% 103917988 86296567 +3054 chr4 + 190214555 173368655 173368654 173368737 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTCCCTCAGCCTCCCAAGTAGCTGGAACCCCAGGCTTGTGTCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........::x...x.xxxx........::..............:x..--.x..:::...::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 155171529 35043026 +3171 chr4 + 190214555 173390039 173390038 173390105 67 TTTTTTTGTTTGTTTGTTTTTTTGAGATTAAGTCTTGCTTTGTCGCCCAGGCTGGAGTGC--AATGGCA chr4 - 94230402 64129164 64129163 64129232 30101171 30101170 30101239 69 TTTTTTTGTTTGTTTGTTTTTCCAGCATTAATTTTTTCTGTGTCATCTAAGCTTGAGAACTGAATAGCA .....................::::x.....x.:..x..x....::.:.:...x...x:.--...:... 60M2I7M 50/67 74.6% 69/94230402 0.0% 2/67 3.0% 109260875 80953680 +3258 chr4 + 190214555 173390447 173390446 173390516 70 ACTGAGTTTTTTGTTGTTGTTGTTCGTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTCACCCA chr4 - 94230402 2688649 2688648 2688717 91541686 91541685 91541754 69 ACTGATTTTGTTGTTGTTGTTGTTTGTTTGTTGTTTTTTGTTTTAAATGTTTTTTC-TTCCTACCACTCA .....x...x..............:....x..x......x...x.:...xxx....-:..:.::...:.. 56M1D13M 53/69 76.8% 69/94230402 0.0% 1/69 1.4% 170701798 19512757 +3111 chr4 + 190214555 173390451 173390450 173390491 41 AGTTTTTTGTTGTTGTTGTTCGTTTTTTTTTTTTTTTTTGA chr4 - 94230402 51354298 51354297 51354338 42876065 42876064 42876105 41 AGTTTTTTGTTGTTGTTGTTTCTTTTTTCTTTTTTTTTAGA ....................:x......:.........x.. 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 122036153 68178402 +3248 chr4 + 190214555 173399491 173399490 173399534 44 TTTGTGTGTCTGTGTGTGAGAGAGAGAGAGAGAGAGAAGAGGAA chr4 - 94230402 18982313 18982312 18982356 75248047 75248046 75248090 44 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA .:.......x........x..................:..:.:. 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 154417178 35797377 +3120 chr4 + 190214555 173399493 173399492 173399531 39 TGTGTGTCTGTGTGTGAGAGAGAGAGAGAGAGAGAAGAG chr4 - 94230402 18982317 18982316 18982355 75248048 75248047 75248086 39 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG .......x..........................:.::. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 154417176 35797379 +3009 chr4 + 190214555 173430803 173430802 173430853 51 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGGAGAGAAAA chr4 - 94230402 88558242 88558241 88558292 5672111 5672110 5672161 51 TCTCAAAAAGACAAAAAAAAAAAAAAAAAGGGTGGGGGGGGGGGTAAGAAA .........:.x..................:.x.:.:.:.:..:x.::... 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 84872561 NA +3807 chr4 + 190214555 173432249 173432248 173432441 193 TCTTTCCTTCCTTCCTTATTCCCTTTCTTTCTTCCTTCCTTCCTTCCTCC-----CCCCCTCCCTCCCTCCTTCCCTTCCTT--CCTTCCTTCCTTCC--TCTTTCATGTTTCCTGACATCTATAAAAGGGAGATTCCTC-----TTCCTCTTCCTCCCCTTACT-CCTCCTTCTCCTCCCTCTCCTCCCTTCCTTCTCCTCCTTCTT chr4 - 94230402 91731746 91731745 91731944 2498459 2498458 2498657 199 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACC---------ACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCGCACCCGCCTCACCCCCCTCACTCACTGCTT .:.:..x..:...:..xx..:x.....:...::........:..:...::-----:.:.:...x.::.....:..:.x:..:--.x..:x..x..:..--...:::::.:..x...x....xx:---------.:...:.-----.:...::...x:.:....x.-.x...x..:..x.x.:.x....x.::..:..x.::x..x... 50M5I27M2I14M2I24M9D7M5I20M1I42M 116/184 63.0% 199/94230402 0.0% 24/184 13.0% 81700503 NA +3186 chr4 + 190214555 173432371 173432370 173432490 120 AGATTCCTCTTCCTCTTCCTCCCCTTACT---------CCTCCTTCTCCTCCCTCTCCTCCCTTCCTTCTCCTCCTTCTTCCTCCTCTCCTGTCTCTCCCCACTCCCTCCATCCCGGTCATTCCTTTTC chr4 - 94230402 14950874 14950873 14950988 79279415 79279414 79279529 115 AGATTCCATCTTCTCTTCACAATATTACCAAGTTGGTGCCCCATTCTCCACTTTCCTGTCTCTT---TGCCATCCTTGCTCC-----------CTCATCCCACTCACTCCATCCTGGTCACTTCTTTTC .......x::.:......x:xx:x....:---------..:.x......x.::..::x..:...---.x:.x.....x:...-----------...x:.......x........:.....:.:...... 29M9I26M3D15M11D36M 75/106 70.8% 115/94230402 0.0% 23/106 21.7% 158481497 31733058 +3172 chr4 + 190214555 173435101 173435100 173435156 56 TAAATGCATATATATCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT chr4 - 94230402 19704277 19704276 19704332 74526071 74526070 74526126 56 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTT .....:........:x...:.:.x.....:...x::..............x:.x.. 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 153730824 36483731 +3786 chr4 + 190214555 173445741 173445740 173445814 74 CTGCAACCTCCACTTCCTGGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x:.:...........:.x...x.xx.x........::::.........:......x...... 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 155248615 34965940 +3234 chr4 + 190214555 173470068 173470067 173470141 74 CATATTTGTGATCTGTCCCC---TTCGTTTCTCTTTTTTCTCTCTCTCCCTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 8439368 8439367 8439444 85790959 85790958 85791035 77 CATCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTT ...x..:xx.:.:.x.....---...xx.....::...x.:.:.:::........:..:..........:..:.... 20M3I54M 53/74 71.6% 77/94230402 0.0% 3/74 4.1% 165030700 25183855 +3159 chr4 + 190214555 173479422 173479421 173479470 49 TTTTTGTTTGTTTGTTTTTTTGTTTTTTTTTTTTTTTGAGACAGAGTCT chr4 - 94230402 61451329 61451328 61451377 32779026 32779025 32779074 49 TTTTTGTTTGTTTGTTTTTTGGGTGTTTTTTTTTTTTCAGGAAGATTCT ....................x.x.x............x..:x...x... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 112028093 78186462 +3316 chr4 + 190214555 173479424 173479423 173479523 100 TTTGTTTGTTTGTTTTTTTGTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCTAGGCTGGAGTGCAGTGGCATGATCTAGGATCACTGCAGCC chr4 - 94230402 86812720 86812719 86812798 7417605 7417604 7417683 79 TTTGTTGTTTTGTTTTTTTGTTTTTTTTTTTTTGTAAACCAGCTCATTGCTCCTTTG---------------------ATGAGCTTAGTTCACTGCAACC ......xx.........................x.:.:x...xx:x......:x...---------------------....x..x:.x........:.. 57M21D22M 62/79 78.5% 79/94230402 0.0% 21/79 26.6% 86666704 NA +3035 chr4 + 190214555 173480345 173480344 173480378 34 CTGGTTTTTTTTGTTTGTTTGTTTTGTTTTTTTT chr4 - 94230402 20794453 20794452 20794486 73435917 73435916 73435950 34 CTGGTTTTTTTTGTTTGTTTGTTTTGCTTTTTTT ..........................:....... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 152685892 37528663 +3610 chr4 + 190214555 173482904 173482903 173483066 163 TATTAAATATATAATACATATAATATATTAT---ATATGAAATATATAATATATTGTACATATTGTATATATAATATATAATATATTATATATTTCATATGTATAATAT-ATTATATA-----ATT----TATATGTAATATATTTCATGTATATTTTATATATAATATATTTCAT chr4 - 94230402 67910059 67910058 67910220 26320183 26320182 26320344 162 TATTACATATACAATACTAAAAATATACTATTAGATACATAATA---AATATATTGTATATAG--TATATATAATATGTAGTATA-TACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAA--------ATATTTTATTAATGACACACTACAT .....x.....:.....xx.x......:...---...::x....---...........:...x--............:..:....-..:..:.xxx...x:.x...xx.-....x...-----...----..:..:...x.x.--------.........xx..:.:.:.:.x... 31M3I10M3D16M2D20M1D23M1I8M5I3M4I13M8D25M 114/149 76.5% 162/94230402 0.0% 27/149 18.1% 105572845 84641710 +3446 chr4 + 190214555 173483188 173483187 173483328 141 TATGATATATAT-TATATGATATATCATATAATATATATATTATATATAATATATGATATATCATATATGATATATCATATATGATATATAATATATGATATATCATATATGATATATTATATATTACATATCATATATTAT chr4 - 94230402 48211465 48211464 48211596 46018807 46018806 46018938 132 TATCATATCTATACATACGAC---TAATATATTCTATGTACTGTATATTA-------TCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ...x....x...-:...:..:---.x.....x.x...:..:.:.....x.-------.x.x.:......x....::.....x.:x:.....x:.:.xx.....:......:...x...x.xx:...:x..:x:..::.x... 12M1I8M3D26M7D85M 89/131 67.9% 132/94230402 0.0% 11/131 8.4% 125271723 64942832 +3639 chr4 + 190214555 173484442 173484441 173484592 151 ATATATAATATATATTATATAC-ATATAATATATAATATATATTATATACATATAATATATATTATATATTATATACATATAATATATATT-------ATATATTATGTATATTT---TATATGTTATATATTATGTATATTTTATATATTATACATTATGT chr4 - 94230402 67910065 67910064 67910220 26320183 26320182 26320338 156 ATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAA------ATATTTTATTAATGACACACTACAT .....:....:xx.xx......-..xx:...:......x....xx.:..:...xx.......x...:..x.........:.:.x...x...-------..xx.x...xx.:....---..:..:.x.x.x.------.........xx..x.:...:..::. 22M1I68M7I17M3I13M6D25M 103/145 71.0% 156/94230402 0.0% 17/145 11.7% 105574377 84640178 +3362 chr4 + 190214555 173484756 173484755 173484820 65 ATATAATACATATTATATATTATATACATGTAA--TACATATTATATATTATATATTATACATATAA chr4 - 94230402 57624254 57624253 57624320 36606083 36606082 36606149 67 ATATAATACACTCTATATATTATATACATGTAAATTATTTGATATAAAATATACATTAGACATGCAA ..........:x:....................--..:x.:x....x.x....:....x....::.. 33M2I32M 52/65 80.0% 67/94230402 0.0% 2/65 3.1% 115860502 74354053 +3501 chr4 + 190214555 173484793 173484792 173484982 190 TATTATATATTATATATTATACATATAATATATATTATATGTACAATATATTATATATAATATATATTATGTATATTTTATATATTATATATTATATACATATATAATATACATTATGTATATTTTAGATATTATATATTATATTATATATTATATATAATATTATATATATTATATATAATATTATAAA chr4 - 94230402 67910059 67910058 67910226 26320177 26320176 26320344 168 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTA----------------TATATAATATGTAGTATATACATGTGAGATAAAT-TTAAGCTGA--TTAAATATCA-ACATTTGAATACATAT--AAGAAAATATTTTATTAATGACACACTACATTACAGA .....:....xxx...:..x.x.....x...xx:x..:..:xxx........:......:..----------------......x...:..x.........:.:x:...x.:-...x.:xx.--...:....:.-.:...xx.x..:....--x.x.x......x...xx..x.:.:.:x.:....:.:. 62M16D34M1D9M2D10M1D16M2D37M 115/168 68.5% 168/94230402 0.0% 22/168 13.1% 105574734 84639821 +3406 chr4 + 190214555 173484807 173484806 173484903 97 TATTATACATATAATATATATTATATGTACAATATATTATATATAATATATATTATGTATATTTTATATATTATATATTATATACATATATAATATA chr4 - 94230402 67910059 67910058 67910151 26320252 26320251 26320344 93 TATTACATATACAATAC----TAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATA .....:.:...:....:----..x.x:..:.x...xxx...:......x....xx.......xx.......x....:.x:....:.:..:.:.x... 17M4D76M 66/93 71.0% 93/94230402 0.0% 4/93 4.3% 105574748 84639807 +3206 chr4 + 190214555 173491189 173491188 173491232 44 TAATACAGAATT-CTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTT chr4 - 94230402 18929902 18929901 18929946 75300457 75300456 75300501 45 TGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT .:....x.....-................:............... 12M1I32M 41/44 93.2% 45/94230402 0.0% 1/44 2.3% 154561287 35653268 +3047 chr4 + 190214555 173499814 173499813 173499885 72 AGGGATCGAAAGAAAGGAAAGGAGAAAAATACTGAGAAACATGTTTTGGCAGGCCAGGCCTTCAGAGACTAC chr4 - 94230402 64535643 64535642 64535714 29694689 29694688 29694760 72 AAGGACCCATAGAAGGGAAAAAAGAAAAACACTGAGGAACATGGTTCTGCATGGAAGATCCTAAATGGCAAC .:...:.x.x....:.....::.......:......:......x..:x...x.xx..::.:.x.:x.:.x.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 108964171 81250384 +3131 chr4 + 190214555 173566864 173566863 173566924 61 TTTGATTTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTCTGAGA chr4 - 94230402 72028650 72028649 72028710 22201693 22201692 22201753 61 TTTGATTTACAAATATAATTATCTGTGTGTACTGTTTTCTTTTTTCTTTTTTTTCCTGTGA .........:.x.....xx...x.:.:.:..:xx....:......:........:...x.. 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 101538214 88676341 +3131 chr4 + 190214555 173566868 173566867 173566920 53 ATTTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTCT chr4 - 94230402 92735351 92735350 92735403 1495000 1494999 1495052 53 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.x.....:...:..:.:...............:.x.........:.x.:. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 80831517 NA +3254 chr4 + 190214555 173566868 173566867 173566919 52 ATTTATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTC chr4 - 94230402 92735353 92735352 92735404 1494999 1494998 1495050 52 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTC ..:.....:...:..:.:..........x....:.x.........:.x.... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 80831515 NA +3003 chr4 + 190214555 173566871 173566870 173566918 48 TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735399 1495004 1495003 1495051 48 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ...x.....:...:..:.:........x......:.x.........:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 80831519 NA +3111 chr4 + 190214555 173566872 173566871 173566921 50 ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTCTG chr4 - 94230402 92735351 92735350 92735400 1495003 1495002 1495052 50 ATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG ....x.....:...:..:.:......x.x......:.x............ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 80831521 NA +21607 chr4 + 190214555 173571214 173571213 173571663 450 AAGTAAAGGACTAATTAAAAGACCTGTGTCCACAGTAGAAAA--AAAATGATGAATCTTTTCATCACTCAGCAGCTTAGGGATGG-TCCAAATATATTGTTTTCTTTTTCCCCCTTGGAGTTATTTATTGGTCAGGGGGAGGGTGGACAGAACTGCTTTTGAAGTTAAACATCTTGCTTGGATGAGCAGATATGTTGCATCAAATCAAAGTAATAAAAAGACAAAATGCTTTATTAAATCTTCTTTATCACTATATTGTGCTCCAATAGGATGATCTAATTAAAGACACAGTTGAGCCTCTTTTCATCTGAAGAGGAGTTCACAGGCTTTCATTATTAAAAGGTTTGCACAGAAACAAATACGTGGCTGTATTGCTTCCAAGTTTCTCAGCGGTGCCTCCTTTCTGTTTTGCTGTAATTGTTATGGAAGTCTTGGCTGCCACTTCATGGCTTG chr4 - 94230402 49369679 49369678 49370117 44860286 44860285 44860724 439 AAGGAAAAGATTCATCTTAGG-CCCATGGCTACAGAAAAGAATGACAATGATTGATCTTCTCACCACTCAGCAGCGTCGGCAAAGCTACAAACATAT-ATTGTTTTTACTCCTCTGGGAGTTATTTATTGAGCAAAGGGAGGGTGGATAGTACTTCCTTTGAAGTCAAACATCTTGCTTGGATAAGGAGATATGTTGCATGAAATGAAAGTAATAAAAGGACAAAATGCTTTATTAAATCTTCTTTATCACAATATTGTGTTCCAATAACATGATCTAATTAAAGACGTATATGAACCTCTTTTCATCTGAGGACTAGTTCAGAGGCCTTCA-----------TTTGTTCTGAAGAAAATACACTGCTGAAAAGTTTCCAAGATTTCCAGTGATGTATTCTTTCCATTTT-CTCTAATAGGTGTTGAAGCTTTAACTACATCTTCAAGATTTG ...x...:..:.x..:xx.:.-..::..x.:....x.:.:..--.x......x:.....:...:...........x.x..x.x:.-.x....:....-:..x.:...x::..:..x..............:x..::...........:..x...x.:........:.................:..x.............x....x............:................................x........:.......:x.................::.xx...:...............:..xx......x....:....-----------....:x.x...:x......::x....x.xx.:.......x..::...:.:..:x.:.....::....-..x....x.x.:.x....::..::..:.xx.....x.::... 21M1D20M2I41M1I11M1D234M11D67M1D42M 336/436 77.1% 439/94230402 0.0% 17/436 3.9% 124201535 66013020 +3282 chr4 + 190214555 173583742 173583741 173583839 98 TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTCTCTCTTTCCCTTTCCTTTTCCTTTTCCC----------TTTCCCTTCCATTCCC chr4 - 94230402 35294578 35294577 35294683 58935720 58935719 58935825 106 TTCCTGCACAATTTCCT--CTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTCCC .....x.x:xx:.....--...::.:....x.x.:x..:....:...:..x..:...:x..::.:.....:...x....:..----------...:.:.::....... 17M2D63M10I16M 66/96 68.8% 106/94230402 0.0% 12/96 12.5% 138289164 51925391 +3160 chr4 + 190214555 173583783 173583782 173583831 49 TCCTCCCTTCCTCTCTCTTTCCCTTTCCTTTTCCTTTTCCCTTTCCCTT chr4 - 94230402 36600615 36600614 36600663 57629740 57629739 57629788 49 TCCTTTTTTCCTCTCTCTTTCCCTTTCTTCTTCCTTTTCATTTCTTTTT ....:::....................:.:.........x:..::::.. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 136983168 53231387 +3803 chr4 + 190214555 173585289 173585288 173585370 82 TGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGATGTGCACCACCATG chr4 - 94230402 18197127 18197126 18197206 76033197 76033196 76033276 80 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG .:..:..:xx.x..:.::..........x...x..x.x........::::.........:.:...--.:.........::.. 65M2D15M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 155388162 34826393 +3568 chr4 + 190214555 173598277 173598276 173598368 92 CATGATCT-CGGCTCACTGCAATCTCCTGGGTTCAAGTGAGTCTCATGCCTCAGCCTCCCGAGTGGCTGGGATTACAGACATGTGCCACCATG chr4 - 94230402 18197120 18197119 18197206 76033197 76033196 76033283 87 CATGTTCTACAGCCCA----AAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ....x...-.:..:..----..x..:.............xx..x..x.x........::.:...:.....:.:...--..:..::....::.. 8M1I7M4D56M2D15M 65/86 75.6% 87/94230402 0.0% 7/86 8.1% 155401157 34813398 +3043 chr4 + 190214555 173599338 173599337 173599387 50 AGAAATAAAAAAGAAAGGAAAAAGAAAAAAAAAGTAATGTAAAAATGTAA chr4 - 94230402 82423486 82423485 82423535 11806868 11806867 11806917 50 AGAAATAAAGAAGGAGGGAAAAAAAAAAAAGAAGGAATGACAAAAGATAA .........:...:.:.......:......:...x....xx....x:... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 91175852 NA +3027 chr4 + 190214555 173649365 173649364 173649411 47 CACACACACACACACACACACACACACACACATATGTATATATATAT chr4 - 94230402 87372747 87372746 87372793 6857610 6857609 6857656 47 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ..x...........x.........:x:.:..:......::....... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 86276618 NA +3247 chr4 + 190214555 173745068 173745067 173745131 64 TATGTAGTATATATGAACACACACACACACACACACACACACACACACACACAAACTCTGGAGT chr4 - 94230402 28470359 28470358 28470421 65759982 65759981 65760044 63 TAAGTAGTACATATGTATACACAGACATGTATGCACACACATACATACTCACAAA-TCTAAAGT ..x......:.....x.:.....x...:::.::........:...:..x......-...::... 55M1D8M 48/63 76.2% 63/94230402 0.0% 1/63 1.6% 145274709 44939846 +4360 chr4 + 190214555 173770694 173770693 173770855 162 TTTCTCTTTCTTTCTCTCTTTCTTTCTTTCT--------CTCTCTCTTTCTTTCTTTCTTTTCTTTCTTTCTCTCTCTCTCTTCCTTTCTTTCTTTTCTCTCTTTCTTTCTCTCTTCTTTCTTTCTTCTTCTTTCTCCCCTCCCTCCCACCCTCCCTTCCTTCCTTCCTT chr4 - 94230402 45185576 45185575 45185743 49044660 49044659 49044827 168 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTT-CTTTCTTTAACTCTTCCCTTTCTCACT-TAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ...x.x:..x..x...x:....::....:..--------:.:...x:...x................x..:.::x:..:....-........xx:.::..:......:x..-.xx.x:....:x..x...x.:.:..:xx:.x.:..:.x:...::x.:...:::..:.. 31M8I44M1D27M1D58M 103/160 64.4% 168/94230402 0.0% 10/160 6.2% 128585118 61629437 +3258 chr4 + 190214555 173770755 173770754 173770819 65 TCTCTCTCTCTCTTCCTTTCTTTCTTTTCTCTCTTTCTTTCTCTCTTCTTTCTTTCTTCTTCTTT chr4 - 94230402 8439379 8439378 8439443 85790960 85790959 85791024 65 TTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTT .:....:.:x.x...:x....::....x.:.:.:.:.::...:.:......:...:......... 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 165331376 24883179 +3075 chr4 + 190214555 173770816 173770815 173770873 58 CTTTCTCCCCTCCCTCCCACCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 38223649 38223648 38223706 56006697 56006696 56006754 58 CTTTCTCGCCTCCTCCCCACCCTCCCCCGCCTTCCTCCTCTTTCACCTTCTTCCTACC .......x.....::...........::x.:.:.:....:::.:x.:.:......x.. 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 135547167 54667388 +4539 chr4 + 190214555 173799020 173799019 173799223 204 ATTGTGTATGTATACCATATCTTTTTTCTTTCTCTCTCTCCTTTCTTTCCTTCCCCCCTTCCTTCCTTCCTTCCT--TCCTTCCTTCCTTCCTTC----------------------CCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 46931206 46931205 46931431 47298972 47298971 47299197 226 ATTGTGCCTGtttttcct--ctttgcttcttgtatttctgatttttgtccttttttctctttttcctccttcactatttcttcctttttctctccAGGAGCAGCTGCTGACACGGATCTTTTCCTTCTGTTCCCTTTCCTTCCACTCCCCACTACATTCCATTTGCATCTCCGTCCTCTCCTACCCAAATGCATCACTCTTTCTCCGTCTCTCCCTGACCTTCCCACT ......:x...x.x:.x.--....x:.::..x.x.:...xx...:.x.....::::.::.::.....:.:.:x..--.:.......::.::..:.----------------------.:..:.....:x.......:......x:...::x..x.x....x.::x:x::...x....::.:.x.::xxx.x.x..x:..:.....:x......:..xx.::..:.x.. 18M2D55M2I18M22I111M 123/202 60.9% 226/94230402 0.0% 26/202 12.9% 126867814 63346741 +3053 chr4 + 190214555 173799056 173799055 173799190 135 TCTCCTTTCTTTCCTTCCCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC chr4 - 94230402 13620142 13620141 13620276 80610127 80610126 80610261 135 TTTCTCTTATTTTTTACACACATATCCTCTCTGTGTTGATCCTCCCCGGCTTCTTCTCCTTCCCCACCCCTCCATTCCATGTAGTTCCTGGTCCCTTTTGTGGCTTTTCTCCCTCTTCCCATCTCCTTTTTCTCC .:..::..x...::.x.x.x.x.x:.:..::.x:x.:xx....:..:xx....:.::.......:x...:...x....x.x:xx.....xx:::.:..:x.xx...:::...:..:.:..x..:::::..:..:. 135M 74/135 54.8% 135/94230402 0.0% 0/135 0.0% 160178914 30035641 +3159 chr4 + 190214555 173799088 173799087 173799227 140 CCTTCCTTCCTTCCTTCCTTCCTTCC--CTTCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC--TTCCTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGT------TTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:..:xx.x:x..:.........x--....xxxx:x..x:..:...:..:....::..:::..::x..:...x.x:.:.x..:.--...:xxx....:x.------...:................x.xx..:::...:... 26M2I58M2I14M6D36M 85/134 63.4% 138/94230402 0.0% 10/134 7.5% 130717201 59497354 +3722 chr4 + 190214555 173799118 173799117 173799245 128 CCTTCCCTTCCCTTCCCTTCCCTTCCTTCCT----------TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC--TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT chr4 - 94230402 43081887 43081886 43082024 51148379 51148378 51148516 138 CCTCCCCGGCACGCTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTT--TTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:...xx.x.x::..:.:.....x.x.:.----------...:.....--......::..:::..::x..:...x.x:.:.x..:.--....xxx::...x.:...:...............x.xx..::........ 31M10I9M2D36M2I50M 85/126 67.5% 138/94230402 0.0% 14/126 11.1% 130717231 59497324 +3030 chr4 + 190214555 173847048 173847047 173847109 62 ACTTTTCTTTCTTTCTTTCTTTCTCGTTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 47552666 47552665 47552727 46677676 46677675 46677737 62 ATTTCTATCTCTAGTTTTCTTCCACAGTGTTGCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT .:..:.x.:...xx:......:.x.:x.x.:x....:...:...:................. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 126294382 63920173 +3072 chr4 + 190214555 173847074 173847073 173847111 38 TTCTCTCTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGT chr4 - 94230402 18929913 18929912 18929950 75300453 75300452 75300490 38 TTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGT ..........:...:....................x.. 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 154917161 35297394 +3112 chr4 + 190214555 173851921 173851920 173851974 54 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGAGAGAGAGAGAAAAGA chr4 - 94230402 6440203 6440202 6440256 87790147 87790146 87790200 54 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGATGGAGATGA ....:.....:.....::...........::..:.::...:....x:..:.x.. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 167411718 22802837 +3059 chr4 + 190214555 173851922 173851921 173851973 52 TCTCAAAAAAAA----AAAAAAAAAAAAAAAAAAAGAAGAGAGAGAGAGAGAAAAG chr4 - 94230402 81165343 81165342 81165398 13065005 13065004 13065060 56 TCTCAACTGAAAGTTTAAAAAAAAAAAAAAGGATAGAAGAGAGAGAAAGAGAAAGG ......xx:...----..............::.x............:.......:. 12M4I40M 44/52 84.6% 56/94230402 0.0% 4/52 7.7% 92686579 NA +3006 chr4 + 190214555 173877223 173877222 173877263 41 TCATATGTATACACACACACACACACACACACACATATATA chr4 - 94230402 66904845 66904844 66904885 27325518 27325517 27325558 41 TCATATATGTACGTACACACACATACACACACACATATTTA ......:.:...::.........:..............x.. 41M 35/41 85.4% 41/94230402 0.0% 0/41 0.0% 106972378 83242177 +3237 chr4 + 190214555 173899461 173899460 173899602 142 CATCTAGAGATATTTTAAAAGACTAGAGGAAATAGAAATGATTAATTCAGGGCATGACCTT----TGCTCTGGATA--ACTTGTTTTGTTGTGGTTGTCTTCCTTTCTCCCTTTCTCTCTCTCTTTCTTTCTTTCCTTTTCTCCTTCC chr4 - 94230402 12651407 12651406 12651547 81578856 81578855 81578996 141 CATTAAGCAATATTTT----GTGTAAAATAGTTTAGAATGA--AATTCTGCACATTGTCTTACATTAGTTAGGATACCATCTGCTTTGGTGCAAGAATATTCATTTCTCTCCTTCTCTCTCCCATTCTTCCGTT-CTTTTCCCCTTCC ...:x..x:.......----.xx..:.:x.:x.x::.....--.....x.x:...x::...----.:x.:x.....--.::..:....x..:::xx:.x...x......:.:.........:.x.....:.x..-......:...... 16M4D21M2D18M4I11M2I56M1D13M 92/135 68.1% 141/94230402 0.0% 13/135 9.6% 161248054 28966501 +3739 chr4 + 190214555 173899538 173899537 173899726 189 TTTTGTTGTGGTTGTCTTCC-----TTTCTCC---CTTTCTCTCTCTCTTTCTTTCTTTCCTTTTCTCCTTCCTTCCTTCTTTCCTTCCTTCTCTCTTTCTTTCTTTCCTTCCTTCCTTCCT-----TTCTTCCCTCTCTTTC--TTTCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT chr4 - 94230402 69436007 69436006 69436210 24794193 24794192 24794396 204 TTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGGGTCTTACTTCTTTTCTGACTACTTCACCAAGCTTCTGCCTCTCTTCCCATCTTCTATTTTGGTCCTTTTTATTCCTT ....x:.::x:.::.:....-----..:....---...:.....x:x:....:.:x.....:......:xxx..:::..:x::.:..:.:..x....x.:...::..:..:.x:..:...x.-----x....x.:...:..::--:.x....x.:xxx:.:..x...::.....:x:....:x.::.xx:::::..:x...... 20M5I7M3I87M5I16M2I59M 111/189 58.7% 204/94230402 0.0% 15/189 7.9% 104463531 85751024 +3439 chr4 + 190214555 173900098 173900097 173900171 74 CTGCAGCCTCAACCTCCCAGGCTCAAGCAATCTTCCTGCCTCAGCCTCCACAGTAGCTGGAACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..x..:.::..:.....::x.::x.xx.x........::xx................x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 155702972 34511583 +3707 chr4 + 190214555 173911351 173911350 173911470 120 AGAGATCCACATATGTATGTACACACACACACACACACATATATGCATATATATATATATGGTGTGGTGGGGTCTTGCACTGAG-ATCTCTGTCTATGTATAT----ATATGTGTGTGTGTATGT chr4 - 94230402 21704665 21704664 21704782 72525621 72525620 72525738 118 AGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAA-----ATGTAATAGATGTG--AATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGT ...:.x..x:....:.......................:.:...:x.-----..:..xxx.:....--::x.x..x....::..-.x..:.:.x:...x....----....:.:.:...:..... 47M5D14M2D16M1I18M4I18M 82/113 72.6% 118/94230402 0.0% 12/113 10.6% 152206686 38007869 +3707 chr4 + 190214555 173911351 173911350 173911470 120 AGAGATCCACATATGTATGTACACACACACACACACACATATATGCATATATATATATATGGTGTGGTGGGGTCTTGCACTGAG-ATCTCTGTCTATGTATAT----ATATGTGTGTGTGTATGT chr4 - 94230402 21701092 21701091 21701209 72529194 72529193 72529311 118 AGAAAACCTTATATATATGTACACACACACACACACACGTGTATAAA-----ATGTAATAGATGTG--AATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGT ...:.x..x:....:.......................:.:...:x.-----..:..xxx.:....--::x.x..x....::..-.x..:.:.x:...x....----....:.:.:...:..... 47M5D14M2D16M1I18M4I18M 82/113 72.6% 118/94230402 0.0% 12/113 10.6% 152210259 38004296 +3046 chr4 + 190214555 173911356 173911355 173911410 55 TCCACATATGTATGTACACACACACACACACACATATATGCATATATATATATAT chr4 - 94230402 66904844 66904843 66904898 27325505 27325504 27325559 55 TTCATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTAT .:..:.......:...........:.........:....x:.x:.x:.x:.:... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 107006512 83208043 +3662 chr4 + 190214555 173913466 173913465 173913539 74 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x..:.::..........x...x.xx.x........::....:......:......x.:.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 155716340 34498215 +3261 chr4 + 190214555 173921755 173921754 173921837 83 CTACAACCTCCAACTCTTAGGCTCAAGAGATCCTCCCTCTTCAGCTTCCCAAGTAGCTGGGACTACAAGCGCACACCACAGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....:..:xx.:..::.:..:.....x.x.:.x.xxxx:.....:.::...........:......--..::......x... 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 155724629 34489926 +3056 chr4 + 190214555 173922738 173922737 173922786 49 TCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATATTC chr4 - 94230402 27825830 27825829 27825878 66404525 66404524 66404573 49 TCCATCTCATAAAAAAAAAAAAAAGATGAAAAATAAAAGGAACGTGTTC .........x..............:.x:.....x....:...x:.:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 146096908 44117647 +3193 chr4 + 190214555 173957862 173957861 173957930 69 CACACACATACATACATATATATACACACACATACATATATATACATACATATATGTATATACATTTAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:...x..:......x..:....:......::.::....:.x.....:.:x..:.:.:::..::.:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 166361450 23853105 +3292 chr4 + 190214555 173957866 173957865 173957954 89 CACATACATACATATATATACACACACATACATATATATACATACATATATGTATATACATTTATACGTATGTATATATATCTGTCTGA chr4 - 94230402 71630131 71630130 71630213 22600190 22600189 22600272 83 CACTTACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCAT------GTGAATATGTGTGTCTTCCTGA ...x...:.:...::.............x.:...:....x:x.::..::....:.x.:...------..:x:...:.:.:...x:.... 61M6D22M 57/83 68.7% 83/94230402 0.0% 6/83 7.2% 102327735 87886820 +3231 chr4 + 190214555 173983654 173983653 173983769 116 AAAGAAAGAAGGAAA--GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAGAAAGAAAGAGAAGGAAAGAGAAAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 61334684 61334683 61334801 32895602 32895601 32895719 118 AAGGAAATATGTGAACTGAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGA ..:....x.x.x:..--......:.....x......x.:x...:.:..:x:.:....x:xx..x....xx..x..:...x.x.:...:x:.x.:.:..::.x:.:.:...:..:.::. 15M2I101M 72/116 62.1% 118/94230402 0.0% 2/116 1.7% 112648970 77565585 +3042 chr4 + 190214555 173983660 173983659 173983743 84 AGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAGAAAGAAAGAGAAGGAAAGAGAAAGAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ....:x.:xx..x.....x...::...:.........:.x..x.:xx:.::.:::...:.:..x.:...x.:::.....:.... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 137125366 53089189 +3557 chr4 + 190214555 173983672 173983671 173983826 155 AGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAGAGAAAGAAAGAGAAGGAAAGAGAAAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAGCTTCCAGAGAATT----GTTAAGTATAATA chr4 - 94230402 30533164 30533163 30533316 63697087 63697086 63697239 153 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATG------AGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCACATTTAAATATAATA .:.x.:....:..........::.:.:....:.:...xx.x....:.:x:.:::xxx....x.....xx:.:.x:....:.x.------.....::..:..:::..x:xx....:.:..:::::x.:..::.x::...x.:.----x....:....... 83M6D53M4I13M 89/149 59.7% 153/94230402 0.0% 10/149 6.7% 143450508 46764047 +3424 chr4 + 190214555 173995914 173995913 173996142 229 TCTCTTTCTTTCTTTCTTTTGAGACAGTCTCACTCTCAATCTTTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTCTCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT---CTTTCTCTCTCTCTCTCTTTCT-----TTCTTTCTTTTTCTTTCTTTCTTTCTTTTGAAACAGTCTCACTCTC-----GCCCAGGCTGGAGTGCAGTGCCGCA chr4 - 94230402 61964741 61964740 61964963 32265440 32265439 32265662 223 TCTCCTT-TTTCTCTGTTTCAAATCAG-----CTGCTGACCTGT---TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTC----------TCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCCAGAAGGCCAGGCAGTGGGGGAGCGCTGCA ....:..-.....:.x...::.:x...-----..x:::.:..x.---..:...x..x.....:.....:.:.:.:.:::......::..:..:.........x::x:x.x.x.x...----------.......::---..::.:.:...x.x...:.:x:-----:..:.::::x.x..::..x:x.::.:::.x.xx...:x:...:...-----.x......x.x:.x.x..:..:... 7M1D19M5D12M3D70M10D9M3I22M5I46M5I25M 128/210 61.0% 223/94230402 0.0% 32/210 15.2% 112031173 78183382 +3866 chr4 + 190214555 173995966 173995965 173996121 156 TTTTCTTTTCTTTCTTTCTTTCTTTCTCTCTCCCTTCCTTCCTTCCTTC----CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTCTTTCTTTCT-----------TTCTTTTTCTTTCTTTCTT--TCTTTTGAAACAGTCTCACTCTCGCCC chr4 - 94230402 91731747 91731746 91731919 2498484 2498483 2498656 173 TTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCGCACCC ..:..x.........x::..x.....::..:.........:..:....:----x.::.....x.:::....:....x::..xx:x:..x..x...:.:x....::x:x...x..-----------.:.::x..x..:.:....:--...:..:.x...x:.x:x.:.x.:... 49M4I61M11I19M2I27M 98/156 62.8% 173/94230402 0.0% 17/156 10.9% 82264219 NA +3269 chr4 + 190214555 173996035 173996034 173996107 73 CTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTGAAACAG chr4 - 94230402 68014329 68014328 68014401 26216002 26216001 26216074 73 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATTATAAAAAAG ..x.....:::...:.::x.::...:.:..:.:.:.::x...................x:.x..x.:...x.. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 105981706 84232849 +3192 chr4 + 190214555 174001505 174001504 174001566 62 TGTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACAGAG chr4 - 94230402 87469866 87469865 87469927 6760476 6760475 6760537 62 TGCTTGCTTTCTTCGTGTTTTGGGGGTTTTTTTGTTTGTTTTGTTTTGTTTTTGAGAGAGAG ..:...:...:x.:x.......xxxxx.....xx.......................x.... 62M 48/62 77.4% 62/94230402 0.0% 0/62 0.0% 86531639 NA +3012 chr4 + 190214555 174037069 174037068 174037104 36 TTATTTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAA chr4 - 94230402 86355157 86355156 86355192 7875211 7875210 7875246 36 TTCTCTTCTCTCTCTCTCTCTTTTTTTTTTTTTTAA ..x.:............................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 87681912 NA +3329 chr4 + 190214555 174065133 174065132 174065199 67 CTGCAACCTTCGCCTCCCGGGTTCAAGTGAGTCTCCTGGCTCAGTCTCTCAGGTAGCTGGGATTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:.:...........xx..x.xx.......:..:...:........:.:.... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 155868007 34346548 +3562 chr4 + 190214555 174224817 174224816 174225035 219 CCTCCCCTCCCCTCCCTTCCCCT-CTCCTCCCCTCCCCTCTCCTCCCCTCTCCTCCCCTCTCCTCCCCTCTCCTCCCCTCCCCTCCCCTCTCCTCTTTTCTCCCCTCCCCTCCTCTCCCCTCCTCTCTCCTCTTTTCTCCCCTCCCCTCCCCTCTTCTCCCCTCCCCTCCCCTCCCGTC---------TCCTCCCCTCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCGC chr4 - 94230402 92221141 92221140 92221369 2009034 2009033 2009262 229 CTTCGCCTGCACCCCATGTCCCTGCACCCCCGTGTCCCTGTGTAACCCTACGCAGCCCCGTGTCTCCGTGCACCCACGTTCCCACTACACCCCCCAGGCCCCCGCGCCCCACAGCCACGCGCCTCCGACCTCCGCTCTCCCATCCTCCCCCCTCCCCCGCATTCCCCGTCCCTCCCGCCAGAAGGGGGCGCTGCGCTCCAAGCGCTCTTCCTCTCTGTGGTCCTCTCAC .:..x...x.x.:..x.x:....-.x..:..x:x:....x.x:xx....x:x.xx...:x.x:::..x.x:x.:.x.x.:...x.:x.x.:..:.xxx:.:..x.x....x.xx.:x.x.x....:xx....:x:......x...:.:......::.:x.x:.....x:........:.---------:x..x.x...:xxx.x....::......x.xx::.....:. 23M1I155M9I41M 126/219 57.5% 229/94230402 0.0% 10/219 4.6% 82003676 NA +3034 chr4 + 190214555 174291745 174291744 174291807 63 GGAAGTTTTCATGTTTTCTTTATTCTTTTATCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 90710005 90710004 90710067 3520336 3520335 3520398 63 GGAATTAGTGATGTTTATGTTAGACTTTTAGGGTTTTCCTTTCTTTTTTTTTTTTGTTTTTTT ....x.xx.x......x:x...xx......xxx.....:................x....... 63M 49/63 77.8% 63/94230402 0.0% 0/63 0.0% 83581740 NA +3331 chr4 + 190214555 174299466 174299465 174299573 108 TACAGCTTTTAAACTCATAGAGGTATAATAGATTTTATTATTTGTATAATCTACCATTCTCTCATA------TTCAGTTGGATGATATTTCTTACAGTTAAATATATCCAGAAT chr4 - 94230402 3482001 3482000 3482112 90748291 90748290 90748402 112 TAAACCTTCGTAACTCATAGAAGTACAGTGGATTTTAGAATTTGTGCAGTCTACCTTTCTGCCCTAAAGCAGATCAGTTT--TGTTGTTCCTGACACGTCAACTTCTCCTGAAT ..x.x...:xx..........:...:.:.:.......xx......::.:......x....x:.x..------x......x--..x.:..:..x...xx.x..:x.x...x.... 66M6I8M2D32M 75/106 70.8% 112/94230402 0.0% 8/106 7.5% 170817465 19397090 +3259 chr4 + 190214555 174342426 174342425 174342478 53 AGGGAGGGAGGGAGGGGAGGGGAGGGGAGGGAAAGAAGGGAAGGAAGGAAAAG chr4 - 94230402 29307049 29307048 29307101 64923302 64923301 64923354 53 AGGGAGGGCTGGGGGGGGGGGGCAGGGAGGAAGAGAAGGAAACAAAGGAAGAG ........xx..:....:....x:......:.:......:..x:......:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 145035377 45179178 +3735 chr4 + 190214555 174368415 174368414 174368497 83 CTGCAACCTCCGCCTCCTGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTGCCCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:..:..:xx:x..:....:......::x...x.xx.x........::..................x...--......:::. 71M2D10M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 156171289 34043266 +3317 chr4 + 190214555 174405457 174405456 174405519 63 TGTATGTGTATATATATGTGTGTGTGTGTATATATATA--TATATGTAAAAGCTAAAAACCAATG chr4 - 94230402 43600824 43600823 43600888 50629515 50629514 50629579 65 TGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATATTAAAGCTAAAAGCTTATG ...x.......x..:........:.:::...x......--.....:.x..........:.:x... 38M2I25M 50/63 79.4% 65/94230402 0.0% 2/63 3.2% 130804633 59409922 +3079 chr4 + 190214555 174431611 174431610 174431657 47 TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTTACCTTCCAAA chr4 - 94230402 60867969 60867968 60868015 33362388 33362387 33362434 47 TCAAAAAAAAAAAAAAGATCAAGAGAAAAAAAAAATTACCTTCCAAA .:..............:.xx..:.:......:..x............ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 113563642 76650913 +3439 chr4 + 190214555 174447871 174447870 174447971 101 CTTGACATATAGTGCATATACACACACACACACACACACACACACACACATGTGTATATGTATATACATATGTGTATATATATACACATATGTGTGTGTAT chr4 - 94230402 4417337 4417336 4417434 89812969 89812968 89813066 98 CTTGAGATTTAG---ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .....x..x...---.:...:.:.............x:x...:..:..::x.x..x.::::..:..:xx.x.::.x..x............x.:.x.:... 12M3D86M 66/98 67.3% 98/94230402 0.0% 3/98 3.1% 170030534 20184021 +3288 chr4 + 190214555 174447883 174447882 174447962 80 TGCATATACACACACACACACACACACACACACACACATGTGTATATGTATATACATATGTGTATATATATACACATATG chr4 - 94230402 73121108 73121107 73121187 21109216 21109215 21109295 80 TGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACG .......x..:.....:.:.....x.x:..::x::....::.....x...:.::x:...:...:x:..:...:.x...:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 101326775 88887780 +3179 chr4 + 190214555 174447886 174447885 174447938 53 ATATACACACACACACACACACACACACACACACATGTGTATATGTATATACA chr4 - 94230402 38535897 38535896 38535949 55694454 55694453 55694506 53 ATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACA ..........::...::x:x.:.....:..............:.:.::..... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 135911989 54302566 +3138 chr4 + 190214555 174454674 174454673 174454725 52 AGGTTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTT------------TTTTGGACAGAGT chr4 - 94230402 21037172 21037171 21037235 73193168 73193167 73193231 64 AGGTTTTTTTGTTTGGTTGGTTGGTTTTGTTTTTGTTTTAGATATTTTTTAGTTTGGACAGAAT ...............x...x...x...............------------x..........:. 39M12I13M 47/52 90.4% 64/94230402 0.0% 12/52 23.1% 153417502 36797053 +3086 chr4 + 190214555 174454677 174454676 174454731 55 TTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTGGACAGAGTCCCTCT chr4 - 94230402 20801447 20801446 20801501 73428902 73428901 73428956 55 TTTTTTTGTTTGTTTGTTTGTTTTTGGTATAATTTTCTCTGGTTATAATGTCTCT ..........................x.x.x:....:.:...x:.x.:.x:.... 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 153653230 36561325 +3147 chr4 + 190214555 174455727 174455726 174455802 76 TATGTATGTGTGTATATATATGTGTATATATATATTTATTTTTTATT--TTTTATTTTTTTTCGTATATATTTTTTTT chr4 - 94230402 15882777 15882776 15882854 78347549 78347548 78347626 78 TGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTTGTTTTTCATGGTTTTTTCTTTT .:...:.................:xx.:.:.xx:...x...:..:..--....:..x......:.:xx.x...:.... 47M2I29M 55/76 72.4% 78/94230402 0.0% 2/76 2.6% 158572950 31641605 +3282 chr4 + 190214555 174466400 174466399 174466459 60 GAAAGAACAGAAAAGTATTTCATTTGGTTTTTAAATTTTTCTTTTTTTTTTATTTTTTAT chr4 - 94230402 71648845 71648844 71648904 22581499 22581498 22581558 60 GAAAATACCTAAAAATATTTTTTTTCATTTTTAAATGTTTCTTTTTCTTTTTTTTCTTAT ....:x..xx....:.....:x...x:.........x.........:....x...:.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 102817555 87397000 +3257 chr4 + 190214555 174478605 174478604 174478756 152 GCGACAGGGTAAGACTCCATCTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAATCCTATCAAGTATCTTCTCAGACCATAGAGGAATAAAACTAGAAACGAATTCCAAAAGGAACCCTTAAAAC---TACAAATATACATGGAAATTAAAC chr4 - 94230402 20078001 20078000 20078136 74152267 74152266 74152402 136 GCTACAGGGAAAATTTGCAAGTTAAAAAAAAAAAAAAAAAAGCAGCAACAAAAAAAACCCCAAC--------------ACcaaaacaaaacaaaacaaaaAACAG-----AAGAGTACAAATCAAAATAGATGCTAATGCTCATGGAAAGAAAGC ..x......x..:x:.x..xx.:...................x.:x.:x........:..:.x.--------------....x.:x::..:.....x.:....::-----..:..x.xxxx.:....:---.:.x...::x........xx..:. 64M14D27M5D18M3I24M 90/133 67.7% 136/94230402 0.0% 22/133 16.5% 154400604 35813951 +3231 chr4 + 190214555 174488880 174488879 174488968 89 AAGACAGAAATGAAAGAGAGAAAGGAAAGAAAGAAAAGAAAAGGAAAGAAAGGAGGAAAGAAAGAAAAGAAAAGGAAAGAAAGAAGGAA chr4 - 94230402 59495494 59495493 59495582 34734821 34734820 34734909 89 AAAACAAAGATAGGGGAAAAAAAAGTAAAAAAAAAAATATTCCTAAAATAACTGGAGAAAAAGGAAATTAAAAGGAGAGAGAGAAGGAA ..:...:.:..::::..:.:...:.x..:...:....x.xxxxx...:x..xx:.::..:..:....xx.......:...:........ 89M 57/89 64.0% 89/94230402 0.0% 0/89 0.0% 114993386 75221169 +3726 chr4 + 190214555 174497666 174497665 174497735 70 CTCCTGGATTCAAGGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGTATGCGCCACGGTG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:....:......x.x...x.xx.x........::..................x.--...:....x... 56M2D12M 55/68 80.9% 68/94230402 0.0% 2/68 2.9% 156300527 33914028 +3916 chr4 + 190214555 174527299 174527298 174527374 76 ACTAGCTCTGTGACTTTTGGATAGTTACTTAATTTATCTGAATCTCAGCTTCCTCATCAGTAAAATGAGGATAATA chr4 - 94230402 11947210 11947209 11947285 82283118 82283117 82283193 76 ACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATGATTATAATA ....:..x......:..x..x....:.......:.::...x:..:...:....:...xx:.:......xx...... 76M 56/76 73.7% 76/94230402 0.0% 0/76 0.0% 162580089 27634466 +3329 chr4 + 190214555 174528208 174528207 174528320 113 CCCTGCAAGGTA----AGTAGTAGTATCCTCATTTTACAGTTGAAGAAAATGA-GCCTCATGGAAGACAAGGGACTGATACCAGAAC---------TTAGCAACAAACTTGGGTACACATC-CAAGTC chr4 - 94230402 80987841 80987840 80987968 13242435 13242434 13242562 128 CCCTGCGAGGTAGGTAAGTAGTAGTATCCCTATTTTACAGATGGGGAAACTGAGGCATTAGAGAGGCTACGTGACTTGCCCAAGGTCACAGGTGAGTCAGTGGCAGAGCTGGGAACAGACCTCAAGTC ......:.....----.............::.........x..::....x...-..x.:.x:..:.x:.x.x....x::x.x..:x.---------.:..:::..:.x:....x...x.:.-...... 12M4I37M1I33M9I25M1I6M 80/113 70.8% 128/94230402 0.0% 15/113 13.3% 93540367 NA +3086 chr4 + 190214555 174542954 174542953 174543036 83 CTCAGACAGTTGCAAAAAACAAAAAGAGAGAGGGAGAGAGAAAAAAAAAACCAAAAGCAAAACAAAACAAAAAACCCAAAACA chr4 - 94230402 12971399 12971398 12971481 81258922 81258921 81259004 83 CTCAAGTGTATATAGAAAAGGAAGAGAGTATGGAAAACTCTGGAAAAAAATCAAAACCAAAACAAAACAAAAAAACCCAACCA ....::::xx.::.:....x:..:....x:x..:.:.xxxx::.......:.....x.................x..x..x.. 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 161571555 28643000 +3256 chr4 + 190214555 174544184 174544183 174544286 103 CTGTCTGAAG-----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAG chr4 - 94230402 36858270 36858269 36858377 57372026 57372025 57372133 108 CTGCCTGAAATATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG ...:.....:-----..x..x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::..:.:.... 10M5I93M 66/103 64.1% 108/94230402 0.0% 5/103 4.9% 137685914 52528641 +3355 chr4 + 190214555 174544185 174544184 174544282 98 TGTCTGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAG chr4 - 94230402 36858280 36858279 36858377 57372026 57372025 57372123 98 TATCTAACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .:...:.x:.x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:::...:..... 98M 61/98 62.2% 98/94230402 0.0% 0/98 0.0% 137685905 52528650 +3284 chr4 + 190214555 174544207 174544206 174544290 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:::......:.:x...:.x:.:..:.:.:.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 137685913 52528642 +3173 chr4 + 190214555 174544211 174544210 174544294 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........::x..x.:xx..:.:::......:.:x...:.x.::..:.:.:.... 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 137685917 52528638 +3286 chr4 + 190214555 174544218 174544217 174544331 114 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGA-AGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGAAAGAAAGAAACAGGGAGGAAGGAAGGAAGGAAGGAAGGAGAAAG chr4 - 94230402 55334392 55334391 55334506 38895897 38895896 38896011 115 AAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAAAGG ....x:..x.:::..x..xx.::.:..:.:...-.:.x.:x.x:x...............:x.x......:..:...:...::...x:x:...:.::.::..:.x:.x.x:..:. 33M1I81M 69/114 60.5% 115/94230402 0.0% 1/114 0.9% 119209826 71004729 +3038 chr4 + 190214555 174560067 174560066 174560131 65 AGCAAAACAGGAATGCAGAGAAAAGAACTAACAGGCCCTGCTGGTTTCTCAGATGCAGTGCTGCA chr4 - 94230402 78155346 78155345 78155410 16074993 16074992 16075057 65 AACAAAGCATGAATCCAGTGAAAAGGTCTGACAGTCCCTGTTTATCTCCCAGCTTGAGTTCTGCA .:....:..x....x...x......:x..:....x.....:.x:.:..:...x.xx...x..... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 96404721 93809834 +3156 chr4 + 190214555 174639338 174639337 174639396 59 ATCTAAAGGAATTCATCTCATTACCAATATGTGTATGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 34346832 34346831 34346890 59883513 59883512 59883571 59 ATTTACAAAAATTTATCCCACCAACAGGATTTGGATCTGTGTGTGTGTGTGTGTGTATG ..:..x.::....:...:..::.x..:x..x..x..x...................:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 140292506 49922049 +3160 chr4 + 190214555 174639391 174639390 174639432 42 TGTGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAGAGGGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..................x..:..............:::.:. 42M 36/42 85.7% 42/94230402 0.0% 0/42 0.0% 155657076 34557479 +3185 chr4 + 190214555 174639393 174639392 174639428 36 TGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:........:................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 93010329 NA +3467 chr4 + 190214555 174639393 174639392 174639431 39 TGTGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAGAGGGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ...................:.................:. 39M 37/39 94.9% 39/94230402 0.0% 0/39 0.0% 155657078 34557477 +3322 chr4 + 190214555 174639395 174639394 174639435 41 TGTGTGTGTGTGTGTGAAAGAGAGAGAGAGAGAGGGAAAGG chr4 - 94230402 18982315 18982314 18982355 75248048 75248047 75248088 41 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGG ................x:................:.:.... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 155657080 34557475 +7520 chr4 + 190214555 174643800 174643799 174644080 281 GATGAATATCCTCATGCCTAAGAATTTTATAGATAACCCAGTAGAAAATATTAAAAATCAAAAAAGCTAATGGGAAGCAGGCTCGGGAGATGGTATCAATCTTCTTGGCCCGGTCGATAAAGACCTTCCTCA---TTTCATCAGGACTTTTTG--GCATTAC-CTGGACAGGGTGG-----------TTGGGGCCCTTTGGAGTCATGCCATCCTTTGCTTGTAGACATGGTCCCATTCCATAGGCTGTGAAGCTGAATCGGCTTTCCC---TTACCTCATCATCCTGTCAAAGAAAAATG chr4 - 94230402 92234379 92234378 92234671 1995732 1995731 1996024 293 GGTGGATGTCCTCTGAGCGCAGCACTTTGTACACAACCCAATAGAAGATATTGAAGACCAGGAAGGTGAAGGGGAAGACGGCTCGGGAGATGGTGTCGATGCGCTTGGCACGGTCGACATAACGCTTGTGCAGGGTTTCCC-----CTTCCCGCAGCAGTGCACTGGGCGGGGGGGGGCTGTAGATTCCAGGACCCTCCCCAGCC---CCCTCCTTTGCCTGCAGGCAGTGGCCCAGCCCGTAGCCTCGGAAGTAGAGGCGGCTCTCACGGATGAGCTCTTCCTCCTAGAGAGGGAAAGTG .:..:..:.....xx:x.xx..x.:...:..x.:......:.....:.....:..:.:..::..:.:x..x......xx...............:..:..x:x......x.......:.x.:xx...x:x..---....x:-----...:::.--...x.:.-....:.:...x..-----------:::..:....::xx..:.---..x........:..:..:..xx.x....x:..:...x..xx....:x..:x.....:..x.---.x.x...x..x....:xx:.:.:...:.. 132M3I6M5D7M2I7M1I13M11I18M3D61M3I29M 183/273 67.0% 293/94230402 0.0% 28/273 10.3% 82409421 NA +3278 chr4 + 190214555 174659110 174659109 174659199 90 AATTTACAGCTGCATACTCCAGAAGTGCTGAAAACACAAAAAGGAGGCATACTGCCATCCAAATATCAATAGCTTTGACATATGAAACCT chr4 - 94230402 25391024 25391023 25391113 68839290 68839289 68839379 90 AGTTGACAGCAGCAAACTCGATAAGAGCAGAAAACACAAAGGCAAAGCAGACTGCTATGAACCAGTCCATGGCAGTAGCATATGATACTT .:..x.....x...x....x.x...x..x...........::x:.:...x.....:..xx.xxx:..x..:..xx.::.......x..:. 90M 61/90 67.8% 90/94230402 0.0% 0/90 0.0% 149268086 40946469 +3196 chr4 + 190214555 174660001 174660000 174660085 85 TCAGCTTCTTCAGTCGTTAATATTTAACTACATTTATTGTTGTGTGTGTATGTGTGTGTATATATATATACACATA-----TATATATTC chr4 - 94230402 19559262 19559261 19559345 74671058 74671057 74671141 84 TCTGCATTTTTAATTTTT----TTTAGCTA--TTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTC ..x..x.:..:.:.:x..----....:...--...x..x..........:.....:.:..............xx..-----.:....... 18M4D8M2D44M5I9M 63/79 79.7% 84/94230402 0.0% 11/79 13.9% 155100739 35113816 +12741 chr4 + 190214555 174677070 174677069 174677294 225 GCACTTACTTTTGGCAAGGAAGCTCGTGATCCTGAACTCTGTGTAGTCATCGTTAGCACAGTGGTTATCCCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTCGCTCCAGATGGAATCGCACTTCTATACACGTAAACTTTCCT chr4 - 94230402 92237659 92237658 92237883 1992520 1992519 1992744 225 GCACTGACCTTGGGCAGAGAGGCACGGGAGCCGGCGCTCTGAGTGGTCATGGTGAGCACGGTGGTGATGCCCAAGCCCACCCGCGCCGGCGCTGCGTCCATGTTGATCCAGAAGGAGACCCAGGAGAGGATGACGATGAGCAGGCTGGGGATGTACATCTGGATCAGGTAATAGCCCATCTGCCGCTCCAAGTGGAACTTCACCTCAATGCAGGTGAACTTGCCT .....x..:..x....::..:..x..x..x..x.x:.....x..:.....x..x.....:.....x..x....::x.:....xx.....:.....:.................x..:........x..:..:..:..x..x..:.....:.................:..:..x.....:..:.......::.....::x...:..x..:..x..:.....x... 225M 172/225 76.4% 225/94230402 0.0% 0/225 0.0% 82439411 NA +4626 chr4 + 190214555 174677132 174677131 174677284 153 GGTTATCCCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTCGCTCCAGATGGAATCGCACTTCTATACACGT chr4 - 94230402 71769871 71769870 71770021 22460382 22460381 22460532 151 GGTTA--CCCAGTGGGACTCTTGCAGCACTTGCATCAGGATTGATCCAAAATGATAGCCAGGACAGAACAACAATTAGCAGTGTAGGAGCATAAACACCCATCATGTAAAATCCAACTTGTCTTCTTAAAGTGAAGATTACTTCTACACAAGT .....--.....x.xx..:..x..x.xxx:......x:x:........:.....x.x......:....:......:..x..xx.:...:::..x.:x:xx....x:..:x....x.:.....x::::.:.xx...xxx:.......:...x.. 5M2D146M 98/151 64.9% 151/94230402 0.0% 2/151 1.3% 102907261 87307294 +5707 chr4 + 190214555 174677139 174677138 174677253 115 CCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTC chr4 - 94230402 83282385 83282384 83282499 10947904 10947903 10948018 115 CCGAGGGATGTCCTGGCTGGTGTAGAGTCTCTCTTGATCCAGAAGGAAACCCAGGACAGAACAACAGTCAGGATGCAGGGAATGTAGGTCTGAATGGCAAAATAACCCATACGTC ..x..:.x.::......:....:x.x:..:x.x...........x...........:....:....:......x:.x.........x:....:..x:x.x.:..x.....x:... 115M 84/115 73.0% 115/94230402 0.0% 0/115 0.0% 91394754 NA +5802 chr4 + 190214555 174677139 174677138 174677253 115 CCCAGAGCTACCCTGGCCGGTGCTGCATCCATGTTGATCCAGAATGAAACCCAGGATAGAATAACAATCAGGAGACTGGGAATGTACATCTGGATCAGATAGTATCCCATTTGTC chr4 - 94230402 25149646 25149645 25149760 69080643 69080642 69080757 115 CCCAGAGATGTCCTTGCAGGAACTGCATCCTTATTGATCCAGAATGACACCCATGAAAGAACAACTGTGAGTATACAAGGAATGTATGTCTGGATAGTAAAATATCCCATACGTC .......x.::...x..x..x:........x.:..............x.....x..x....:...x:.x..x.x..x:........::.......x:x.x.:........x:... 115M 86/115 74.8% 115/94230402 0.0% 0/115 0.0% 149527493 40687062 +3031 chr4 + 190214555 174712842 174712841 174712906 65 CATGCATATATACACACATATATATGTAGATTTGTATGTATGAGTATATATATACACACACATAT chr4 - 94230402 71630141 71630140 71630205 22600198 22600197 22600262 65 CATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..........:.......x.....::..xx........:...x..x.::..:.:x.:.::::.:. 65M 45/65 69.2% 65/94230402 0.0% 0/65 0.0% 103082701 87131854 +3188 chr4 + 190214555 174712864 174712863 174712923 60 TATGTAGAT-----TTGTATGTATGAGTATATATATACACACACATATATGCATATATATACACA chr4 - 94230402 30477229 30477228 30477293 63753110 63753109 63753174 65 TATGTACATAAAAATTGCATGTCTGTGTGTCTATATACACACAAATATGTGCATATTTATACCCA ......x..-----...:....x..x..:.x............x....:.......x.....x.. 9M5I51M 50/60 83.3% 65/94230402 0.0% 5/60 8.3% 144235635 45978920 +3353 chr4 + 190214555 174715474 174715473 174715591 118 TGGTT-CATACTTACAGCTTTCCAGTTGCATTATACATGTTTGTACATCCATGGGAAAATTCTTGAGATCCATTGGACAGGAAAGTGTTAATGTTAATCTGAAAGTCAAAGTAATTATT chr4 - 94230402 25241185 25241184 25241303 68989100 68989099 68989218 119 TGGTTATACACTTACAGCTGCCAAATTTCAGTGGGCATGAGTGAGCATCCATAGGGAAGTCCTCCAAGTGCATTGGACATTCGGCTTGGACTGTAAGCCTAAAAGGCAAAAAGATCACT .....-:.:..........x:.x.:..x..x.:x:....xx..x:.......:..:..:.:..:x.::.x.........xxx::x.xxx.x...x.::..:....x....:x:..:.:. 5M1I113M 74/118 62.7% 119/94230402 0.0% 1/118 0.8% 149474289 40740266 +3339 chr4 + 190214555 174715481 174715480 174715597 117 TACTTACAGCTTTCCAGTTGCATTATACATGTTTGTACATCCATGGGAAAATTCTTGAGATCCATTGGACAGGAAAGTGTTAATGTTAATCTGAAAGTCAAAGTAATTATTTTTAAA chr4 - 94230402 71776207 71776206 71776322 22454081 22454080 22454196 116 TACATACAGCTTTCCAATTGCATCTTGCAGCGCTGTGTATCCATAGGAAATAAGGTCAAGTCCAAAGGGCACGACAGAGTAATGGACAATCTAAAAAT-ACAGAAATAGAATTTAAA ...x............:......:x.:..xxx:...::......:.....xxxxx.x.::....xx..:..x..x..x..x.xx.x:.....:...:.-.x..x...x:xx...... 98M1D18M 77/116 66.4% 116/94230402 0.0% 1/116 0.9% 102939274 87275281 +5297 chr4 + 190214555 174715482 174715481 174715577 96 ACTTACAGCTTTCCAGTTGCATTATACATGTTTGTACATCCATGGGAAAATTCTTGAGATCCATTGGACAGGAAAGTGTTAATGTTAATCTGAAAG chr4 - 94230402 92238276 92238275 92238371 1992032 1992031 1992127 96 ACTCACAACTCTCCAGCTGCATCGTGCACGTCTGGATGTCCATGGGGAAGTTCTTGAGATCCATAGGGCAGGACAGGATCAGCGTCAGCCTGCAGG ...:...:..:.....:.....::.:..:..:..x.::........:..:..............x..:.....x..x:.:.::..:.::...x.:. 96M 69/96 71.9% 96/94230402 0.0% 0/96 0.0% 82477206 NA +3119 chr4 + 190214555 174717263 174717262 174717388 126 AGGGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAAAGAAAAAGAAAGAAGGAAAGAAAGAAGAAACAAAGAAACAAAGAAAGGAGGGAGGAAAGAAAGAAGGAAAGGAAGGAAGGAAAAAGAAAGAA chr4 - 94230402 45355412 45355411 45355537 48874866 48874865 48874991 126 AGGGAAAGAGATATAAATATTAGAAGATAAAGAAAACAAGAGAAGGAAGCAATAGATAAAGAAAGATAAGTAGGAGATAAAAGGAAAATAAAGACTCACAAAAAGAGATATGTGAAGAAGAGAGAA .....:.....x.x.:.x.xx:::...x.......:x..:....:....x..x::.x:......x.x.::x.x:.::x..:::.::.:x.....xxx.x::....::.x:x:x...:....:.... 126M 73/126 57.9% 126/94230402 0.0% 0/126 0.0% 129361851 60852704 +3029 chr4 + 190214555 174718944 174718943 174718995 52 GTTCTAGATTTCGTGCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTC chr4 - 94230402 3996907 3996906 3996958 90233445 90233444 90233496 52 GTTTTAGAATTATTGCCTTTTTTTTTTTTTTTTCTTTTTGTAATGGTGTTTC ...:....x..xx...:................:......x:.:..x..:.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 170722037 19492518 +3223 chr4 + 190214555 174721689 174721688 174721797 109 CCAGATACATATATATCTATATATC---TAAGACAGATATAAATGCCATATAACTAAGAGGAAAAAAATATGTGTGTATATATATGTGTGTGTGTGTGTATATATACATATA chr4 - 94230402 15948997 15948996 15949105 78281298 78281297 78281406 109 CCAGATGCAT-TGGATTTGGATACAAGACAAGGTAGATCTCA--GGCATATGACTTAGGTTAAAAGGCAATTTATATATATATATGTGTGTGTGTGTATTAATACACCCATA ......:...-.:x..:.:x...:x---:...::....x.x.--.x.....:...x..:xx....::xx..x.:.:.....................:.xx...:..x:... 10M1D14M3I14M2D68M 74/106 69.8% 109/94230402 0.0% 6/106 5.7% 158772692 31441863 +13250 chr4 + 190214555 174728472 174728471 174728708 237 CACCTTATTGAATAAAGAACATTTCCATTTTTGAAAATTCTTAGCAATTTGTTGTCTGTAGTGACTTCATGAAAGTTGGCACCCTTTTCATTGGCAAAGAACAAATCAGGTTTCCAAATGGAGTCCAACATGGAGGGGTCGAGGTCTAAAGAGTCGTCAGGATATTCACTGTACGCGAGGCGGGGATCATTCCATTTCTGACGAAGAAAGATATTCACTCTGTAATCCTATGATAAA chr4 - 94230402 92238459 92238458 92238695 1991708 1991707 1991944 237 CACCTGATGCTGTAGAGCACGTTGCCGTTCTTGAAGATGCGCAGCAGTTTGTTGTCAGTGGTGACCTCGTGGAAGTTGGCCCCTTTCTCATTGGCAAAGAACAAATCCGGCTTCCAGATGGAGTCGAGCATGGAGGGGTCGAGGTCGAGCGAGTCGTCGGGGTACTCCCGGTAAGCCAGCCGGGGGTCGTTCCACTGCTGCCGCAGGAAGACGTTCACACGGTAGTCCTGGGGCAGA .....x..xxx:..:..x..:..x..:..:.....:..x.x:....:.........x..:.....:..:..:........x..:..:....................x..:.....:........x.:..................x.:x........:..:..:..x.x...x..x..x.....:..:.....:.x...x..x..:....::.....x.x...:....:x.::.:. 237M 180/237 75.9% 237/94230402 0.0% 0/237 0.0% 82490013 NA +7657 chr4 + 190214555 174728487 174728486 174728737 251 AGAACATTTCCATTTTTGAAAATTCTTAGCAATTTGTTGTCTGTAGTGACTTCATGAAAGTTGGCACCCTTTTCATTGGCAAAGAACAAATCAGGTTTCCAAATGGAGTCCAACATGGAGGGGTC--------GAG-GTCTAAA------GAGTCGTCAGGATATTCACTGTACGCGAGGCGGGGATCATTCCATTTCTGACGAAGAAAGATATTCACTCTGTAATCCT-ATGATAAAATAATGAAAGAA--AGAAAAAAAAAAACCCT chr4 - 94230402 71777802 71777801 71778061 22452342 22452341 22452601 260 AGGACATCTCCATCTCGAAATATAAAAAGAAGGATATTTTCTTGAGTGACATCATGGAAGTTAGCATTTTTTTCATTTGCAAAGAACAAGTCCGGCTTCCAAAGACATTTAAACATTGTTGGGTCCACTGTCAGAGTGTCTGAACCCCTCCAGTCGTTGGGCAGTT---------TGAGTCTGGGGTCATTCCACTTCTGTCTTAGAAAGATGTTTACTCTGTAATCCTGATGGGAAGAATACGTAGGAATTAGACCAGACAAAAGTCT ..:....:.....:.:x:..x..xxxx..x.:xx.:..x...xx......x.....:.....:...:::........x...........:..x..:.......x:x.x.:x.....x.xx.....--------...-....:..------x......::..xx:..---------:...x.x...:........:.....x.xx........:..:.............-...:x..:.xx.:.x.:...--...xx.:.x....x:.. 125M8I3M1I7M6I16M9D54M1I20M2I17M 173/242 71.5% 260/94230402 0.0% 27/242 11.2% 102950685 87263870 +3008 chr4 + 190214555 174732804 174732803 174732872 69 TATGTATGTGTGTATGTATGTGTATGTGTGTGTATATACATACATATACATATTCATCAATATAGAATT chr4 - 94230402 25393260 25393259 25393328 68837075 68837074 68837143 69 TGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTTAATT .:...:::.............:.x.......::.:.:...:..::.:..:.x:.:.:..:x.:xx.... 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 149339544 40875011 +5529 chr4 + 190214555 174766953 174766952 174767038 86 AAATGCCTACCATGGTCGTCTCTGCGATAGAGCCAAAGCTGTTGATGAATATGTTGCATGTGACATTAACTGGAGGGCCTGAAAAA chr4 - 94230402 92238981 92238980 92239066 1991337 1991336 1991422 86 AAACCCTCACCATGGTCGTCTCGGTGACGGAGCCGAAGCTGTTGATGAAGATGTTGCATGTCACGTTGACGGGCGGACCTGGAAAA ...:x.::..............x.:..::.....:..............x...........x..:..:..x..x..:....:.... 86M 69/86 80.2% 86/94230402 0.0% 0/86 0.0% 82527972 NA +5197 chr4 + 190214555 174788812 174788811 174788897 86 TTACCTTTAAAATTGGGTCTGATTCTTGCATCATATCCTGATGTCCTGCCCATTAATTTATCCAGAAAATCAGAAGGTGACATTGG chr4 - 94230402 92239306 92239305 92239391 1991012 1991011 1991097 86 TTACCTTTGAAGTTGGGTCGGATCCGGGCATCGTACCCTGACGTTCGTCCCATGAGCTTGTCCAGGAAATCAGAGGGTGACATGGG ........:..:.......x...:.xx.....:..:.....:..:.xx.....x.::..:.....:........:........x.. 86M 67/86 77.9% 86/94230402 0.0% 0/86 0.0% 82549506 NA +3063 chr4 + 190214555 174812285 174812284 174812374 90 AAAAACAGATGTACACAGATATTGCAGTGAAATCATTCTAAATTTATTTTTATAAATAGTATTGAACCAGCAGAGTAGGGACTCATTCAG chr4 - 94230402 43816283 43816282 43816372 50414031 50414030 50414120 90 AACAAGAGATGTAGACAGATCTTCCAGTGAAATTATTCCCAGTTAACTCCACTAACAGATTTCGGACCAGCTGAGCATAATCCAAATCAG ..x..x.......x......x..x.........:....:x.:..x.:.::xx...xx::.x.:.:......x...:.x::x.:x.x.... 90M 59/90 65.6% 90/94230402 0.0% 0/90 0.0% 130996002 59218553 +3199 chr4 + 190214555 174867061 174867060 174867102 42 TGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ..................x.x...............::..:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 155884746 34329809 +3102 chr4 + 190214555 174867063 174867062 174867098 36 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:.......x................. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 93237999 NA +3253 chr4 + 190214555 174867063 174867062 174867101 39 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 18982315 18982314 18982353 75248050 75248049 75248088 39 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAA ..................x.................::. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 155884748 34329807 +3316 chr4 + 190214555 174867065 174867064 174867100 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 93238001 NA +3689 chr4 + 190214555 174867065 174867064 174867104 40 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ....................................:... 40M 39/40 97.5% 40/94230402 0.0% 0/40 0.0% 155884750 34329805 +3002 chr4 + 190214555 174867067 174867066 174867101 35 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.....x.................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 93238003 NA +3222 chr4 + 190214555 174867067 174867066 174867106 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x..................:::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 155884752 34329803 +3015 chr4 + 190214555 174869965 174869964 174870010 46 TCTGTCTAAAAAAAAAAAAAGAAAAGAAAGAAAGAAAAAAGGAAGG chr4 - 94230402 56866784 56866783 56866829 37363574 37363573 37363619 46 TCTGTTCAAAAAAAAAAAAAAAAAAGACTTAAAGAAAAGAGAAAGG .....::.............:......xxx........:..:.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 118003181 72211374 +3082 chr4 + 190214555 174897258 174897257 174897307 50 TCTTTCACAGTTATAACAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 65008110 65008109 65008159 29222244 29222243 29222293 50 TCTTTCCCAGTGATAACAAAACTACCTTTGTTTTTTTTTTTGTTTTTTTT ......x....x......:.:..x::...x...........x........ 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 109889148 80325407 +3304 chr4 + 190214555 174977429 174977428 174977522 94 TCTGCAACAATAAACATCACTGCCATTGCAATTATCTGTGGGACCCTCCCAACTGCCTGATAAAAGGCTATGGAGGTAGTGTTGACAGTGGCCC chr4 - 94230402 1104292 1104291 1104385 93126018 93126017 93126111 94 TTTGCAACAGCAACAAGAACTGCCACTGCAACGCGGGTTGGGCTCCTCCATACTGCGAGAAGCCGGGCTTGGGAGGCAGCGTGGACAGTGGCCC .:.......::..xx.xx.......:.....:xxxxxx....x:.....xx.....xx..x:xx:....xx.....:..:..x........... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 173873137 16341418 +3046 chr4 + 190214555 174979242 174979241 174979295 54 CACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.x.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 107327158 82887397 +3129 chr4 + 190214555 174979244 174979243 174979297 54 CACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.x.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 107327160 82887395 +3212 chr4 + 190214555 174979246 174979245 174979299 54 CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..xx.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 107327162 82887393 +3295 chr4 + 190214555 174979248 174979247 174979301 54 CACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:..x:.:.:.:.:.:...................:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 107327164 82887391 +3070 chr4 + 190214555 174979250 174979249 174979303 54 CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x...:...:.xx:.:.:.:.:.:...................:. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 107327166 82887389 +3213 chr4 + 190214555 175019253 175019252 175019353 101 GAAAGAAAGAA-ACAAAGAAAGAAAGAAAGGAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAGAGAAAAACATCATCTAAGAAAGAAGTG chr4 - 94230402 67445497 67445496 67445596 26784807 26784806 26784906 100 GAAAAAGAGAACATAAAGAAAGAAAGAGAGGAAAGGAGGATAATACAG--CTCAGTAGGAGAAATAAAAAAAAATGGAGAAACATTAAGCAGAATAAAACTG ....:.:....-.:.............:.......:.:..x.:x.x..--xxx.:x.::.....x...:...:.x:..:......:.xx:.::.x.:..x.. 11M1I36M2D52M 67/99 67.7% 100/94230402 0.0% 3/99 3.0% 107573756 82640799 +3104 chr4 + 190214555 175034913 175034912 175034980 68 AGATAGACTGAGATATCAACTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAG chr4 - 94230402 56866766 56866765 56866833 37363570 37363569 37363637 68 AGCTAGACTGAAATGACATCTGTTCAAAAAAAAAAAAAAAAAAGACTTAAAGAAAAGAGAAAGGATAG ..x........:..:x..x..xxxx....................xxx.......::.::..:..x.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 118168147 72046408 +3840 chr4 + 190214555 175103298 175103297 175103435 138 AGAAGAAGAAAAGAGGAAGAAGAAGCGGAAGAAGAAGAAGGAGGAGGAGAGGAAGGA-GGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGA chr4 - 94230402 947065 947064 947203 93283200 93283199 93283338 139 AGAAAGGGCAATGCAAGTGGAGGGGGAGAGGATGGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGAGATGTGA ....:::.x..x.x:::x.:..::.x:..:..x.:.x:::..:.:.....x..x...-........::x.:xxx.........:x::x.xxxx...::..:...........:.:.:....x.:x...x.....x.x.. 57M1I81M 84/138 60.9% 139/94230402 0.0% 1/138 0.7% 174156233 16058322 +4009 chr4 + 190214555 175103312 175103311 175103447 136 GGAAGAAGAAGCGGAAGAAGAAGAAGGAGGAGGAGAGGAAGGAGGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAG chr4 - 94230402 947062 947061 947197 93283206 93283205 93283341 136 GGGAGAAAGGGCAATGCAAGTGGAGGGGGAGAGGATGGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGAG ..:....:::..::x:x...x:..:..:.:::.::x...x....:..::...:x.:x...x.......::.x::xxx......:..:x.:x:xxxx..:...::.......:...:.:......x::x...x.... 136M 79/136 58.1% 136/94230402 0.0% 0/136 0.0% 174156250 16058305 +3610 chr4 + 190214555 175103340 175103339 175103481 142 GGAGGAGAGGAAGGAGGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGA----GAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGA chr4 - 94230402 947058 947057 947203 93283200 93283199 93283345 146 GGGTGGGAGAAAGGGCAATGCAAGTGGAGGGGGAGAGGATGGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGAGATGTGA ..:x.:...:....:x:.x:x:..x:.::..:.:...:.x...x:.:.:....::..x..x...x:::.:...::x..xxx...::.:...x.:x:----.:..:..:.::....:...:.:......x::x...x....:x.x.. 96M4I46M 81/142 57.0% 146/94230402 0.0% 4/142 2.8% 174156282 16058273 +4275 chr4 + 190214555 175103344 175103343 175103488 145 GAGAGGAAGGAGGAGAAGAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGA----GGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGA chr4 - 94230402 947058 947057 947203 93283200 93283199 93283345 146 GGGTGGGAGAAAGGGCAATGCAAGTGGAGGGGGAGAGGAT---GGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGAGATGTGA .:.x..:..:.:.:.x.:x.x.:.x......:..::...x---...x....:...:.:..x:.x...x:.:.:..::.x..----........:x::x.xxxx...::..:...........:.:.:....x.:x...x.....x.x.. 40M3D38M4I64M 91/142 64.1% 146/94230402 0.0% 7/142 4.9% 174156286 16058269 +4157 chr4 + 190214555 175103361 175103360 175103499 139 GAGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGA chr4 - 94230402 947058 947057 947196 93283207 93283206 93283345 139 GGGTGGGAGAAAGGGCAATGCAAGTGGAGGGGGAGAGGATGGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGA .:.x:....:.:..:x..x.x.::x..::...::.....x...x:::.:..:..:..x.:x...x.......::.x::xxx......:..:x.:x:xxxx..:...::.......:...:.:......x::x...x... 139M 82/139 59.0% 139/94230402 0.0% 0/139 0.0% 174156303 16058252 +4040 chr4 + 190214555 175103369 175103368 175103516 148 GGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGGAGAAATGA chr4 - 94230402 947059 947058 947206 93283197 93283196 93283344 148 GGTGGGAGAAAGGGCAATGCAAGTGGAGGGGGAGAGGATGGATGGAGAAGGGGAGACGATGGATGGAGAAGAAACGATCCAGGGAGAAGATGATGCTCTGGGGAGAAGAGGGAGAAGGAAAAAGGGACGATGGATGGAGATGTGATGA ..x.......:..:x.:x.x.:.x:.::..:.:...:.x...x:.:.:....::..x.:x.:.x.....:.::.x.:xxx...::.:...x.:x:xxxx..:.:..:...........:.:.:....x.:x:..x.::.:x.x:.... 148M 85/148 57.4% 148/94230402 0.0% 0/148 0.0% 174156310 16058245 +4030 chr4 + 190214555 175103380 175103379 175103556 177 GGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGAGGGAGAAGGGAGAGGGGAGGGAGGAGGGAGAAGGGAGAGGGGAGGGAAGAGGAGGGAGAAATGAGTAGGGAGAAGGGAGGAGTGGG-AGGGGGAGGGGAGGGGGA chr4 - 94230402 63710284 63710283 63710454 30519949 30519948 30520119 171 GGTGAGGGGAAGGAGGCAGAGGGAGAGACCTGAAGGAA--GAGGAGGCAGATGG----GGCTAAGGGAGATGAGAAAACAGGACACAGTGAGGTCACTGGGACAA-GCAGTGGGGTCACAGTTGGGAGGAGAGCTGGGCAGGAGGCAAGGAAGAGCAAGCAGAGGGGAGCGAGGGAGA ..x.......:.....x:........::xxx..:..:.--.......x...x..----..xx.:..::..x...::.:x...:x:x:.x....xx:xx....x..-.x..x....xx:x.:xx..::.....:x..:.:...::.x.:...:...:::.-..:...::.x.....:.. 38M2D14M4D47M1D53M1I18M 107/170 62.9% 171/94230402 0.0% 8/170 4.7% 111393096 78821459 +3017 chr4 + 190214555 175103524 175103523 175103583 60 GAAGGGAGGAGTGGGAGGGGGAGGGGAGGGGGAAGGAGAGAAGGAGAAGGAGAAAGAAGA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGAAGAAGAAAAGAAAAAGAAACACAAAAA ...:.:.:..xx...:.....:...::........:...:...:.:...:.:x.x:..:. 60M 41/60 68.3% 60/94230402 0.0% 0/60 0.0% 97917447 92297108 +3183 chr4 + 190214555 175190298 175190297 175190383 86 AATCATTTAGTATTGCTTTTGTTGCATCCCAGGCATTTTGTATATTCTGTTTGGGTTTTTTTTTTTTTTTTGTCTTAATTTATTTC chr4 - 94230402 54616765 54616764 54616846 39613557 39613556 39613638 82 AATAGTATAAAATGACCTTTTTTGT-TCTCAG---TTCCTGATATTCTGCTTGGATTTTTTTTTTTTTTTTGTCTTTTTCTGTCTC ...x:.x..:x..x:.:...x...:-..:...---..::xx........:....:.....................xx.:.:.:.. 25M1D6M3D51M 60/82 73.2% 82/94230402 0.0% 4/82 4.9% 120573533 69641022 +3020 chr4 + 190214555 175197764 175197763 175197809 46 GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAGAAA chr4 - 94230402 6438506 6438505 6438551 87791852 87791851 87791897 46 GTCTTAAAAAGAAAAAGGAAAAAAAAAAAAGGAGGAAGGAGGGAGA ....:.....:.....::............:..:....:.::..:. 46M 36/46 78.3% 46/94230402 0.0% 0/46 0.0% 168759258 21455297 +3346 chr4 + 190214555 175224879 175224878 175224949 71 TTATAGATGCATGTGTATATGTGGGTGTATATATATATGTATATACACACACACACACATACATATACACA chr4 - 94230402 14964813 14964812 14964883 79265520 79265519 79265590 71 TTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ..:.:..::..x:.:.:.x..:.x...:.:.::.:............xx........:::...:.:..... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 160260066 29954489 +3181 chr4 + 190214555 175224889 175224888 175224937 49 ATGTGTATATGTGGGTGTATATATATATGTATATACACACACACACACA chr4 - 94230402 25393259 25393258 25393307 68837096 68837095 68837144 49 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACA ......::.....x:.....:...x.:...:..:..........:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 149831630 40382925 +3141 chr4 + 190214555 175224892 175224891 175224973 82 TGTATATGTGGGTGTATATATATATGTATATACACACACACACACATACATATAC----ACATACATGCATATAATGTATATTTAT chr4 - 94230402 4481679 4481678 4481764 89748639 89748638 89748724 86 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACATTATCTAGGTAT .....:...xxx::....x:.:.:.....:.:....x...:......x..:....----.....:...:.:.:.x.:.x..xx... 55M4I27M 57/82 69.5% 86/94230402 0.0% 4/82 4.9% 170743213 19471342 +3237 chr4 + 190214555 175297418 175297417 175297517 100 TTTTATATATTTTTATATATAATTTATATTTATAAATTTTTTATATATTTATATATAATATATATTTATATTTATATATTTATATTATATAAATATATAT chr4 - 94230402 9087929 9087928 9088026 85142377 85142376 85142474 98 TTGTATGTATTTCTGTATATAATGTATATGTGGAAATTATACACGTGACAACATTTAATGTATA--CAGATGTGTATATTTGTATTTATTAAACCCATGT ..x...:.....:.:........x.....x.:x.....x.x:.::.:x:x.:..x....:....--:.x..x.:.......:....xxx....:x:..:. 64M2D34M 66/98 67.3% 98/94230402 0.0% 2/98 2.0% 166209489 24005066 +3231 chr4 + 190214555 175298730 175298729 175298822 93 TTTTAATACATATATATTTAAGC---ACATTTATACAAACACATATGTGTGCATATATATATATACACACAGATATTTCTATATAATTAAAAGTAA chr4 - 94230402 56650804 56650803 56650895 37579508 37579507 37579599 92 TCTTGCTTTATAAAGGTTTAAGACTAACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATA----TATATGGCCCAAGGTAA .:..:x.x:...x.x:......x---......::...:x:.:..::........x......:.........x...----.....::::x..:.... 23M3I49M4D17M 63/89 70.8% 92/94230402 0.0% 7/89 7.9% 118647926 71566629 +3320 chr4 + 190214555 175299014 175299013 175299076 63 GCAAAGATAATCGTTCTCCAAAAAAAAAGAGGAAAAAAAAAGAAGAGGAAGAAGAAAAAAGAA chr4 - 94230402 49250029 49250028 49250090 44980313 44980312 44980374 62 GCAAACATCTTCATCCTATTAAAAAAAA-AGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAA .....x..xx..:.:..x:x........-..:...........:.x.............:... 28M1D34M 50/62 80.6% 62/94230402 0.0% 1/62 1.6% 126048985 64165570 +3170 chr4 + 190214555 175299036 175299035 175299097 62 AAAAAAGAGGAAAAAAAAAGAAGAGGAAGAAGAAAAAAGAAATAGCATTTTAATAAGGAAAA chr4 - 94230402 40848973 40848972 40849034 53381369 53381368 53381430 62 AGAAAAGGGGGAAAAAAAAGAAAGGAAAGAAGAATGAAGGACCAGGATATTACTAATGCAAA .:.....:..:...........::.:........x:...:.x:..x..x...x...x.x... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 134450063 55764492 +3738 chr4 + 190214555 175344502 175344501 175344628 127 CTCCCT-CAGTCACCCATGCTGAGTGCA-----ATGGCATGATCACA---GCTTG----------CTGCAGCCTCAAGCTCTCTGGGCTCAGGTGGTCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACTATAGGCTCATGCCACT chr4 - 94230402 18197066 18197065 18197203 76033200 76033199 76033337 138 CTCTCTGCAGTCACC-ATGCTGGGAGCAGGCTTAGGGCA----CACATCTGCTTGGCATCATGTTCTACAGCCCAAAGCT-TCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACT ...:..-........-......:.x...-----.x....----....---.....----------..:.....:x.....-......:...:...x.:.x.xx:x........:............:....:.x.:x..--..... 6M1I8M1D12M5I6M4D4M3I5M10I15M1D58M2D5M 97/119 81.5% 138/94230402 0.0% 27/119 22.7% 157147436 33067119 +3457 chr4 + 190214555 175347251 175347250 175347314 64 CTCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAGAAAAGAAAATGCTCAAAAAATAT chr4 - 94230402 72849567 72849566 72849630 21380773 21380772 21380836 64 CTAGAGGAAAAAAACAAAAGCAAACAAATAAAAAAAAACAGAAAACATAATGCTTAAAAAATAT ..x:.::.......x....:x...x...x....:....x......x.x......:......... 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% 102497684 87716871 +3047 chr4 + 190214555 175354483 175354482 175354557 75 TTCACAAAGCAGACAAAAACAAAAACATATACTGAGGAAAGAACAACTCTGTTGAATAAGTGATGCTGGGAAAAT chr4 - 94230402 32458033 32458032 32458107 61772296 61772295 61772370 75 TTGACAAAGCAGACATTAACAAAAACATGCAGAGAGAAAAGTGTACTTCTGCTGAACATTTGTTTCTTGTCAAAT ..x............xx...........::.xx...:....x::.x:....:....:.xx..x.x..x.xx.... 75M 53/75 70.7% 75/94230402 0.0% 0/75 0.0% 142896450 47318105 +3432 chr4 + 190214555 175384642 175384641 175384719 78 AAAAAAAAAAAAATAAAAGGAACAAAAAGAAAAAAAAAGAGAAGAGAAGAGAAAAGAAAAGAAAAAAGAAAAGAAAAG chr4 - 94230402 53854863 53854862 53854940 40375463 40375462 40375540 78 AAAAAATGAAAAATAAAAGATACAAAAAGCCGCCGACAAAGCTCAGAACGAGAAAGATAAAAAAAAAAAAAAGAAAAG ......x:...........:x........xx:xx:.x.:..xxx....x:::.....x..:......:.......... 78M 56/78 71.8% 78/94230402 0.0% 0/78 0.0% 121529779 68684776 +3125 chr4 + 190214555 175391017 175391016 175391079 63 GAAATAAGAGAGGAAACAAACAAATGGAAAAACATTCCATCCTCATGGATAGAAAGAATCAAT chr4 - 94230402 13713212 13713211 13713272 80517131 80517130 80517191 61 GAAACAAGAGAAGAAACAAACAAATGAAAATCCATTCCAT--TCATTCATAAACATAATAGAT ....:......:..............:...xx........--....xx...:.x.x...x:.. 40M2D21M 49/61 80.3% 61/94230402 0.0% 2/61 3.3% 161677805 28536750 +4397 chr4 + 190214555 175434535 175434534 175434748 214 TATATATTTAAATA-TATAAATATAAATATTTATTTATATT--TTTAATTTATTAAATATATATTTAAATATATATTTATATATAAATATAAATATATATTTATATATTTAAATATATATTTATATATATATATAAATATATATTTATATATATAAATATAAATATATATTTATATATATAAATATATATTTATATATTTAAATATATATTTATATA chr4 - 94230402 64419294 64419293 64419481 29810922 29810921 29811109 188 TATAGGTTTCCATAGTAGAAATATATATTTTTGATTGTATTAATTGGACACATTTAATAGA-----AAAAATGTATCTATTT-------TAAATGCaatttt---tatttaaaaat-----------tatactttaataCTTACTAGTTTATG---ATAAAGTTATATATTGAAGTATAGACATACATACTTATATATTGAAGTATATATATACATa ....x:...xx...-..x.......x..x...:x..:....--..x:.:x:...x....x.-----...x..:...:...x.-------.....::.xx...---........x..-----------....:x.x....:x..:.x:.x...:---...x.:x........x.x:....x.x...:...:.........x..:.......x..:... 14M1I26M2I18M5D16M7D13M3D11M11D26M3D61M 135/185 73.0% 188/94230402 0.0% 32/185 17.3% 111015241 79199314 +3416 chr4 + 190214555 175434575 175434574 175434707 133 TTTAATTTATTAAATATATATTTAAATATATATTTATATATAAATATAAATATATATTTATATATTTAAATATATATTTATATATA----TATATAAATATATATTTATATATATAAATATAAATATATATTTATAT chr4 - 94230402 2492095 2492094 2492229 91738174 91738173 91738308 135 TTTGAAGTATAAAATATATACTCATGTATATGTTTCTGTAT--GTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCACAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATAT ...:.xx...x.........:.:.x:.....:...x.:...--:...xxx.:..x.:..x.x....x.x.:....::x..x.....----:.:.x:..x.:....:.....::xxxx...x:..x.:....:..... 41M2D43M4I47M 86/131 65.6% 135/94230402 0.0% 6/131 4.6% 172942480 17272075 +3538 chr4 + 190214555 175434575 175434574 175434707 133 TTTAATTTATTAAATATATATTTAAATATATATTTATATATAAATATAAATATATATTTATATATTTAAATATATATTTATATATA----TATATAAATATATATTTATATATATAAATATAAATATATATTTATAT chr4 - 94230402 2495693 2495692 2495827 91734576 91734575 91734710 135 TTTGAAGTATAAAATATATACTCATGTATATGTTTCTGTAT--GTATCTCTGTAGACTTCTCTATTAATACATATGCATAAATATAATTCCATAAGAAAACATATCTATATGCTGTCATAAGAAAACATATCTATAT ...:.xx...x.........:.:.x:.....:...x.:...--:...xxx.:..x.:..x.x....x.x.:....::x..x.....----:...x:..x.:....:.....::xxxx...x:..x.:....:..... 41M2D43M4I47M 87/131 66.4% 135/94230402 0.0% 6/131 4.6% 172938882 17275673 +3079 chr4 + 190214555 175435069 175435068 175435156 88 TATATACATATATAAATATAAATATATATTTAAATATATATAAATATAAATTTATATTTAAATATATACATATATAAATATAAATATA chr4 - 94230402 12802786 12802785 12802873 81427530 81427529 81427617 88 TATATACCCATTAATACATAAATATGTGCATGAATATATCTAAGTATATACGTATTGAAAAAGCTCTGCACATGCAAATACATATATA .......x:..xx.x.:........:.::x.:.......x...:....x.:x...xxxx...xx.x.:..:..::.....:.x..... 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 162632283 27582272 +3153 chr4 + 190214555 175546948 175546947 175547013 66 AAGATTCCTGAATAAAATATTGTACAGGGAAAAGACACCAGAGAAAGGATATTGTAAAACATCCAT chr4 - 94230402 29869958 29869957 29870023 64360380 64360379 64360445 66 AAGGTCTCTTACTAAAACATTGGACAGGGAAGAGAAAACAGAAAATGAAAAATATGAAAAATCCAT ...:.::..x.x.....:....x........:...x.x....:..x.:.x.x.:.:...x...... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 145676990 44537565 +3133 chr4 + 190214555 175549944 175549943 175549998 55 TTTGTCTCAAACAAACAAACAAACAAACAAACAAAAACAAAAAAACCCCACATGT chr4 - 94230402 72103612 72103611 72103665 22126738 22126737 22126791 54 TTTTTTTCAGGGAAACAAACAAACAAACAAAAGAAAAC-AAAAAACCCAACATAT ...x.:...::x...................x:.....-.........x....:. 38M1D16M 45/54 83.3% 54/94230402 0.0% 1/54 1.9% 103446332 86768223 +3038 chr4 + 190214555 175552984 175552983 175553034 51 TGGAAATTAAAATAAATAACAATCAATGGGAGGGTTTTTTTTTTTTTTTTT chr4 - 94230402 51933801 51933800 51933851 42296552 42296551 42296602 51 TGCAAATAAACACACATAACAGCCAATCAGAGGGCTTTTTTTTTTTTTTTT ..x....x..x.:.x......::....x:.....:................ 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 123619183 66595372 +3155 chr4 + 190214555 175560349 175560348 175560470 122 AACAAAGGAGAGAAAGGAAACAAAGAAATAAAGAGTGAGAAAGAAGAAAGGAAGAAAGAAAGAAAGAAACAAAGAGTAAGAAAGAAGAAAGAATAAAAAAGAGAGGAAGGAAGGAAGGGGGA chr4 - 94230402 72526230 72526229 72526344 21704059 21704058 21704173 115 AAAAATGGAAAGAGA-------AAAAAATAGAATATTTGAGAGAGCAAGGCAGACAGGAAAAACAGTCTGAAAGAATCAGAAAGAAAAAAGAAGAGGAACTAGCTGCAAAAAAGAAGAGAGA ..x..x...:...:.-------..:.....:.:x:.xx..:...:x..:.x.::x.:....:.x..xxxx.....:.x........:......x.::..xx..xx.x.::..:....:.:.. 15M7D100M 73/115 63.5% 115/94230402 0.0% 7/115 6.1% 103034119 87180436 +3437 chr4 + 190214555 175560465 175560464 175560559 95 GGGGGAGGGAGGGAGGGAAAAGAAAAGAAAGAAGAAAGAAAGAAAGAACAAAAAGAAAGAAAGAAAGAAAGAAA-----AGAGAAAGAAAGAGAGAGAGA chr4 - 94230402 44400495 44400494 44400594 49829809 49829808 49829908 100 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAA .:.......:...:.:..:...:......::..:...........x::xx....:x...xx.x.:.:..x.:..-----.xx::..:..xx.......:. 74M5I21M 64/95 67.4% 100/94230402 0.0% 5/95 5.3% 131159970 59054585 +3428 chr4 + 190214555 175560469 175560468 175560562 94 GAGGGAGGGAGGGAAAAGAAAAGAAAGAAGAAAGAAAGAAAGAACAAAAAGAAAGAAAGAAAGAAAGAAAAGAGAA--------AGAAAGA-GAGAGAGAGAC chr4 - 94230402 44400495 44400494 44400595 49829808 49829807 49829908 101 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGA--AATGGGCAAAAATAAGCCACAGAAAATGGAATTCTCACTAGAAAAATTAGAGAGAAAC .........:...::.:::..:...........:.........--..x::.x..:..x:.:xx.x......x:...--------.....:.-x.......:.. 43M2D31M8I7M1I11M 68/92 73.9% 101/94230402 0.0% 11/92 12.0% 131159974 59054581 +3215 chr4 + 190214555 175560491 175560490 175560549 59 GAAAGAAGAAAGAAAGAAAGAACAAAAAGAAAGAAAGAAAGAAAGAAAAGAGAAAGAAA chr4 - 94230402 42895011 42895010 42895069 51335334 51335333 51335392 59 GAAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAA ......:.......:....:..x..:..:...x.....:....x..:..xx.x:..... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 132665480 57549075 +3040 chr4 + 190214555 175618524 175618523 175618587 64 CCTACAAGCAAAAAAAAAAAAAAAAAACCACAGGAGATATTACAAAAACATTACACAAAAATAT chr4 - 94230402 28297982 28297981 28298045 65932358 65932357 65932421 64 CCTTCATGAAAAAAAACAAAAAAAAAAAGCAAGGAGATAACAGAAAAAAATTACAGAAATATAT ...x..x.x.......x..........xxxx........x:.x.....x......x...x.... 64M 50/64 78.1% 64/94230402 0.0% 0/64 0.0% 147320542 42894013 +3447 chr4 + 190214555 175626036 175626035 175626235 200 AGAAAGAAAGAGAGAGAGAGA-GAGAG--------AAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA---GAAAGAAAGAAAGAAAGAAAGAAAAGAGCAGATATAAGGTATAAGCCATTCTATAGATAGGTTGTA chr4 - 94230402 21758900 21758899 21759108 72471295 72471294 72471503 209 AGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAACGTTTCAGTGAAAAGTAATAGGGTTATGACTATT---TAAATAAATTGTA ......::..:...x:..:..-.....--------..x..x.::x.x:x...x..:x.x.:...x.x:x..x..x.:.....x:x.:xx..::...:......:.:.:....:.:...::x..:x......xxx....::...---.x....:.:...:x..x:xxxx.:x..:x..xx...:...xxx::.:...---..:...::..... 21M1I5M8I108M3I50M3D13M 120/197 60.9% 209/94230402 0.0% 15/197 7.6% 153867136 36347419 +3519 chr4 + 190214555 175626043 175626042 175626108 66 AAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237695 9237694 9237760 84992643 84992642 84992708 66 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.:..x.x..x.:.........:x..x.:...:.....:....:....:..:...:....::... 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 166388348 23826207 +3012 chr4 + 190214555 175626097 175626096 175626203 107 AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGA----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGCAGATA chr4 - 94230402 32944036 32944035 32944146 61286257 61286256 61286367 111 AACAAAGATAGTGGAACGGGTATGAAGGAAGAAGCTGTCAGATAATTAATAAGGACAGAACCAGAAGAGGAGAGAGTGGGAGATGGGAGGAAAGACAGAAAAGAACAGACA ..x.....x..x:::.x:.:x.x:...:......x----.::x..xx..x..:..x....xx.:.::.:..:...:x.::...x:.:.:......x........:....:. 35M4I72M 67/107 62.6% 111/94230402 0.0% 4/107 3.7% 142682061 47532494 +3593 chr4 + 190214555 175626122 175626121 175626285 164 AGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGCAGATATAAGGTATAAGCCATTCTATAGATAGGTTGTACAGGAAAACTAACTGAGACATTTCGAGCAAACAA-GAAAAAGGATG-AGGCT chr4 - 94230402 29503818 29503817 29503983 64726420 64726419 64726585 166 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAATGTAGGCT .:.....:.:...:..:.:........:x:.::..:....:...:.xxxx.x:....:....:.:.x:...x.x.:xx....xx.:.:.x..:xxxx....x.:x..x.xx.x.:..::x..xx..:::::.x..::x.......x:.-...:...:...-..... 148M1I11M1I5M 98/164 59.8% 166/94230402 0.0% 2/164 1.2% 146122304 44092251 +5916 chr4 + 190214555 175636962 175636961 175637371 410 ATATATATT-TATATATGTAAATATATATAAGATAAAAAATATATTTATATAAAAATATATATAATACAAAAATATATAATATATTTATATATAAAATATTTGTAA---TATAAAAATATATAACATATAATATATCATATATAATATATTATATGTGATATATAATATATAATATATTATATATGATATATTATATGTCACATATAATATATCATATATGTGACATATATCATATATTATATGTGACATAATATATCATATATAATATAAAATATATATTATATATTATATATAATATAAAATATAT--ATTATATATTATATAT-----TATATAAAATATATATTATATAT-TATATATAATATAAAATATATATTATATATTA-TAT-ATTATATAAAAATATATAATATATAACATATA chr4 - 94230402 30253213 30253212 30253578 63976825 63976824 63977190 366 ATATGTACTCTAAACATGGAAAAAAATAGGGGAAAGAAGATATTTCC---TGAAAGGAAACATAATGCAGAA------------------TCCAAAGTCTAGATGACTTTACAGAAGTGCat----tataatataatgtctaaaatatat-----ataatttaaaataaatatcaaataatttatGTTA--------GTCATATAAAAC----------TGTAGTATATAGTCTATAGT--------TAAAATTTA-CATGTATATTGTAAAATATGTAGTATATATTATAAATACCATACAATATATGCATGGCATATTACATATGTATGTCTTTATCTTATGT-TTATACATCTGCATTTGCTATAAAGGATAAAGTATGTAATAGTATCATCATTTAAAAATAGAAGTCATTTAATATTTA ....:..:.-..x.:...x...x.x...x::..x.:..:....x.::---.:...:x.x.:.....:..:..------------------.x:...:.x.xx:.:.---..:.:..:.::..----.........x::.x..x.......-----:.:..x..x....x...x:.x..x..x....x..--------....:...x..:----------...:::.....x:x....x.--------:.x...x..-...:....x.:........:..x...........x...x:...x.......--..x::......:....-----.x.x..xxx...:.-.....:..-.::..x.:x......:x...x.x...:..x..-...-..:..x........x.x:x:..x...:..x.. 9M1I37M3D22M18D16M3I13M4D24M5D34M8D12M10D20M8D9M1D51M2I16M5I14M1D8M1I32M1I3M1I32M 246/352 69.9% 366/94230402 0.0% 72/352 20.5% 145383749 44830806 +3964 chr4 + 190214555 175637179 175637178 175637352 174 TGACATATATCATATAT-TATATGTGACATAATATATCATATATAATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAATATATATTA-TATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAAAT chr4 - 94230402 48211458 48211457 48211626 46018777 46018776 46018945 169 TAACCTTTATCATATCTATACATACGAC-TAATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGAT---TAACATAAAATGTCTTA---AAAAAT .:..x.x........x.-..:..::...-........:x...:..x.:..x.x...x.x.............::x....xx.x:......:.:.xxx....:xx....::.xx...:x..:.-.:x..x....::.:...x..:x..---.x.:...xx..:.x...---...... 17M1I10M1D93M1I24M3D17M3D6M 114/167 68.3% 169/94230402 0.0% 9/167 5.4% 127425721 62788834 +3256 chr4 + 190214555 175637216 175637215 175637323 108 ATATATAATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAATATATATTATATATTA-TATATAATATAAAATAT chr4 - 94230402 48211488 48211487 48211596 46018807 46018806 46018915 109 ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCACAGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTAT ......xx...:x.x.:........x.x........x....:xx....x...:......:.:.xxx....:x.x...::xx:...:x..:.-.:x..:....:x.:... 91M1I17M 72/108 66.7% 109/94230402 0.0% 1/108 0.9% 127425728 62788827 +3338 chr4 + 190214555 175637232 175637231 175637352 121 ATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAAAT chr4 - 94230402 19453175 19453174 19453282 74777121 74777120 74777228 108 ATACTTCATATCATATATATAATGTATAAATAACATTGTACTTTACATATTGTACAAAATATATA-CATTTAT------TAATTTACTGTATACAT------TTTTATTTTATAAGGAAAT ...:x.:....xx..........:..x..xxx.:...:..:x...:.....:..:..........-:..x...------....x..xx:....:..------..x...x.....x::.... 65M1D7M6D17M6D19M 79/108 73.1% 108/94230402 0.0% 13/108 12.0% 156184057 34030498 +3859 chr4 + 190214555 175637246 175637245 175637654 409 ATATATAATATAAAATATATATTATATATTATATATTATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAAATATATAATATA------TAACATATAATATATTATATAATATATAATAATATAATATAGTATATATATAAAAATGTAT---AATTATAT---ATATAAAAA---TATATGGAGAGCCTTAGAAGGACTCC--CAGTAACCTCATATATATATGACCTTTATATATATATAAAACCTTTATATTTTT------ATATATATAAAAATATACAATATATTATATATTATATAAAAAT-----ATATTATATATTATATAAAATATATTATATATTATGTAAAATAT----ATAATATAT-AATATATATTATATATATATTATATATTATATAAAATA chr4 - 94230402 48211488 48211487 48211908 46018495 46018494 46018915 421 ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATAT----CACAGCATATACCATATACGATCTATGA---ATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAAT---CACTGATTTTCTATATTCCTACTACATAGATGCATGGAAATTTTCTTGAATGCAAAAGGCTTTCACTGAGTGCT-----ATGATTTTTACAGAAGCTTTACAGGGATA-AACTTGTACAGCAAAAAAATAATTTCCTATTCTTTATGGAAAACAATCAGAAATAAACAGTTTA--GAACATTACATAATACTGGCCGATACTAAATCATA-ATCTGATAATTTTTATTCTATGTGACATATCATAATATTACATGAAAATAAATTATACAAAC-TTACAT-TTAAAGGAAATA ......xx...:x.x.:........x.x.............:xx....x...:......----:.:.::...x.x:.....:x..x...x.---..:..xx:.x:....::.:...x------.......x...:.x...x.x...---:.x.:..x.xx....x.x:xxx..:.x.:...:..---....x.x.---..::....:---.x:.:x...x..:-----.x..:.::--...x.:.:.:.:.x:x...-:..:.x..:.xxx.x.x..x.x:..:x....:..------.x.:.xx:.:.....x...:.x..--:x.:....:....x.x.-----...:..x..xx..-..xx:...xx..x...x:.....:.x....----...x..:..-..x...x......:.x.:-...:..-...x.x:..... 59M4D28M3D23M6I23M3D35M3I8M3I9M3I13M5D8M2I19M1D34M6I24M2D17M5I13M1D30M4I9M1I18M1D6M1D12M 255/388 65.7% 421/94230402 0.0% 54/388 13.9% 127425758 62788797 +4867 chr4 + 190214555 175637276 175637275 175637666 391 ATATATTATATAAAATATATATTATATATTATATATAATATAAAATATATATTATATATTATATATTATATAAAAATATATAATATATAACATATAATATATTATATAATATATAATAATA-----TAATATAGTATATATATAAAAATGTATAATTATATATAT---------AAAAATATATGGAGAGCCTT-------AGAAGGACTCCCAGTAACCTCATATATATATGACCTTTATATATATATAAAACCTTTATATTTTTATATATATA---AAAATATACAATATATTATATATTATATAAAAATATATTATATATTATATAAAATATATTATATATT--------ATGTAAAATATATAATAT-ATAATATATATTATAT---ATATATTAT-ATATTATATAAAATATAAAATATATAA chr4 - 94230402 48211488 48211487 48211888 46018515 46018514 46018915 401 ATATATTCTATGTACTGTATATTATCTTTTATATATTATATGCCATATTTATCATATATCAC----------AGCATATACCATATACGATCTATGAATCATTGGATGATATGCAGTATCAAGGATTAACATAAAATGTCTTAAAAAATCACTGATTTTCTATATTCCTACTACATAGATGCATGGAAATTTTCTTGAATGCAAAAGGCTTTCACTGAGTGC-------TATGATTTT--------TACAGAAGCTTTACAGGGATAAACTTGTACAGCAAAAAAATAATTTCCTATTCTTTATGGAAAACAATCAGAAATAAACAGTTTAGAACATTACATAATACTGGCCGATACTAAAT-CATAATCTGATAATTTTTATTCTATGTGACATATCATAATATTACATGAAA-ATAAATTATACAA .......x...:x.x.:........x.x........x....:xx....x...:......:.:----------.:x.....:x.....::.:x...:.xx:...:x..:....::.:..x:.-----...:...:x..:.x.xx......xxx.:...x.x.....---------.x.:..::.....:.x::.:-------x:..:.:..::..x.:.x:x.-------.....::..--------..:.:..x.....:.xxxx..x.:x.:..---x...x.x.:...x.x:...x:x....:x....xx..xxx.x...xxxx:.xx.:x.:....:...x.--------..::x....-:.....x.-.....x.x....x...---.:....:..-......:..:...-.....x....:.. 62M10D49M5I39M9I20M7I21M7D9M8D29M3I67M8I9M1D8M1I16M3I9M1I13M1D13M 238/364 65.4% 401/94230402 0.0% 64/364 17.6% 127425788 62788767 +4015 chr4 + 190214555 175637515 175637514 175637696 182 ATTTTTATATATATAAAAATATACAATATATTATATATTATATAAAAATATATTATA-----TATTATATAAAATATATTATATATTATGTAAAATATATAATATATAATATATATTATATATATATTATATATTATATAAAATATAA----AATATATAATATATATAATATATATATAATATATAATAT chr4 - 94230402 20596466 20596465 20596639 73633764 73633763 73633937 174 ATTACCATGTATATCATAACAT-----------TATAACGTGaaataatatttaataatttgtattataaaaCAGATACT-----TTATAGAACATATATAATATATATTGTATAATATGTAGATGTTATATAAAGTACAATTTAAAAGTTTAATATTTGATGT-TGTCTTATATCTCTACAATGTGATAT ...x::..:.....x.x..:..-----------....x::.:x..x.....x.x...-----.......x..x.x...:.-----....:x..x..............x.:....x...:..x..:.......xx:..:..xx..x..----.....x.:..:.-.:.xx.....x.x..xx..:.:.... 22M11D24M5I18M5D63M4I12M1D26M 118/165 71.5% 174/94230402 0.0% 26/165 15.8% 155041049 35173506 +3702 chr4 + 190214555 175637623 175637622 175637800 178 TATTATATATATATTATATATTATATAAAATATAAAATATATAATATATATAATATATATATAATATATAATATAT------TATATATTATATATATTTATATATAATATATTATATATTATATAAAAATATAATATATAATATAAAAATATATAATCTAT-ATATAATATATAATATAAAAAT chr4 - 94230402 67910059 67910058 67910231 26320172 26320171 26320344 173 TATTACATATACAATACTAAAAATATAC--TATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTA-----AGCTGATTAAATAT----CAACATTTGAATACAT-ATAAGAAAATATTTTATTAATGACACACTACATTACAGAACAAT .....:.....:.x..:xx.xx.....x--...x.:...:......x.....x.:......xx...........:.------..:..:.x.x...x.....-----.::xx....x....----:..x.x.xx....:..-...x:.......x.x..:x..-.:.:.x..:..x.:.x..x... 28M2D46M6I19M5D14M4D16M1D21M1I22M 118/166 71.1% 173/94230402 0.0% 19/166 11.4% 107727564 82486991 +3554 chr4 + 190214555 175659139 175659138 175659231 93 TTGGCATGATCTCGGCTCACTGCAACCTCCTCCTCCCGGGTTCAAGCGACTCTCTTGCCTCAGCCTCTAGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197113 18197112 18197199 76033204 76033203 76033290 87 TTGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .......x..x.:------..:..:..:xxxx..:.:.........:.x:..x.xx.x........:.x:.........:......x...... 13M6D74M 63/87 72.4% 87/94230402 0.0% 6/87 6.9% 157462026 32752529 +3735 chr4 + 190214555 175670939 175670938 175671021 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x..:...........:.x...x.xx.x........::.............:....x.:..--:....::.. 72M2D9M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 157473813 32740742 +3507 chr4 + 190214555 175684820 175684819 175684885 66 GCTCTCCCTTCTTTGTATTTTCTTAACTATTTGTGTGTGTGTGTGTGTTTTGTTTTGTTTTGTTTT chr4 - 94230402 56475227 56475226 56475291 37755112 37755111 37755176 65 GTTCTCATTCCTCTGCTTTTTTTTTCAT-TTTGTGTGTGTGTGTGTGTTTTGTTTTGTTTTCCTTT .:....x:.:..:..:x....:..xxx.-................................x:... 28M1D37M 52/65 80.0% 65/94230402 0.0% 1/65 1.5% 119209593 71004962 +3633 chr4 + 190214555 175709195 175709194 175709318 124 ATTCTTCCTTTTTTATT-----------TCATTCCTTCTTTCCTTCCTCCCTCTTCTCCTCCTCTCTCCTCCTTTTTTCTTTCCCTTTTCCTCCCTCTGCCCCCTTTCTCT-CTCTGTCTCTCTCTCTCTCTCTAC chr4 - 94230402 18501253 18501252 18501382 75729021 75729020 75729150 130 ATCCCTCTCTATTTATTGAAGCAAACAATCACTCCCTTTGCCTTTCCATCC------CCCCCCCCCCCCTCCTTTTTTTTCCCCCCTTTACTCCATCTACAATTTCTCTCTGCCACATCTCTTTCCAGTTCACTAC ..:.:..::.x......-----------...:...:.:.x:.:....x:..------..:..:.:.:...........:.::...:...x....x...:.xx::.:.....-.:x::.....:..:xx:..x.... 17M11I23M6D54M1I24M 79/118 66.9% 130/94230402 0.0% 18/118 15.3% 157207942 33006613 +3084 chr4 + 190214555 175709217 175709216 175709290 74 CCTTCTTTCCTTCCTCCCTCTTCTCCTCCTCTCTCCTCCTTTTTTCTTTCCCTTTTCCTCCCTCTGCCCCCTTT chr4 - 94230402 20485614 20485613 20485686 73744717 73744716 73744789 73 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCC-CTTTCTTTTTCCTTT .:.x......x:..::x.:.:x.:..:..:..:.:.:......:........:.....-.::...x:::..... 58M1D15M 49/73 67.1% 73/94230402 0.0% 1/73 1.4% 155223603 34990952 +3118 chr4 + 190214555 175711413 175711412 175711487 75 TATATATATATATATATATATATATATATATATATATATATATATACACACACATACATACATGTATATATAAAT chr4 - 94230402 73121142 73121141 73121216 21109187 21109186 21109261 75 TACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..:...::....x:..:.::x:.....:.:x:..:.....x...::.x....x.x...:.........x::.... 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 102590271 87624284 +3111 chr4 + 190214555 175751746 175751745 175751791 46 TTTTTTTTTTTGTTGTTGTTGTTTGTTTTTTGGTTTGTTTGTTTGT chr4 - 94230402 25791812 25791811 25791857 68438546 68438545 68438591 46 TTTTTTTTTTTGTCGTTGTTGTTGGGGTTTTTTTTTGTTTGTTTGT .............:.........x.xx....xx............. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 149959934 40254621 +3036 chr4 + 190214555 175751757 175751756 175751818 62 GTTGTTGTTGTTTGTTTTTTGGTTTGTTTGTTTGTTTTACAATTCAAGGAAAATGAAATTGT chr4 - 94230402 23249388 23249387 23249449 70980954 70980953 70981015 62 GTTGGTTTTGGTTTTTTTTTGGTCTGTTTGTTTGTTTTTTAAATCTGGAATAACTAAAATGT ....x.x...x..x.........:..............x:..x..x:.:.x..:x...x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 152502369 37712186 +3196 chr4 + 190214555 175787067 175787066 175787145 79 TTGTTTTTCTATTTCTCCCTCTGTTCTTTTTTTTGTTGTTGTTTTTGTTTTTTACCCTTGATACATATGACTGTTCAAA chr4 - 94230402 75135626 75135625 75135695 19094708 19094707 19094777 70 TTGTTTTTTTGTT---------GTTCTTATTTTTGTTGTTCTTATTTCTTTTAAATATTGATACAAATGAATTTTCAAA ........:.:..---------......x...........x..x..x:....x.x:x........x....x.x...... 13M9D57M 56/70 80.0% 70/94230402 0.0% 9/70 12.9% 100651441 89563114 +3000 chr4 + 190214555 175805042 175805041 175805086 45 CAAAAAAACAAAAACAAAACAAAACAAAAACAAAATGAAAGTGGA chr4 - 94230402 71516699 71516698 71516743 22713660 22713659 22713704 45 CAAAAAAACAAAAACAAAACAAAACAAAAAAACCCTCAAAGTAGA ..............................x.xxx.x.....:.. 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 104288343 85926212 +3143 chr4 + 190214555 175812259 175812258 175812340 82 GGAATTAATCAAAAGCTCAATTAGATGTTGGAAAAACTGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 76372503 76372502 76372580 17857823 17857822 17857900 78 GGACATAATGAAATGCT----TTGAGCTTGGAAAACATGGGGTTTTTTTTGTTTTGGTTTGGTTTTTTTGGTTTTTTTTTTT ...xx....x...x...----.x..xx........xx.....x.......x....xx...xx.......xx........... 17M4D61M 61/78 78.2% 78/94230402 0.0% 4/78 5.1% 99439756 90774799 +3202 chr4 + 190214555 175812265 175812264 175812333 69 AATCAAAAGCTCAATTAGATGTTGGAAAAACTGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 55774409 55774408 55774477 38455926 38455925 38455994 69 AGTCACAACCTGAAGCAGAAAATGGCAATGTTAGGGGTTTTTTTTGTTTGTTTTTTGTTTTTTTTTCTT .:...x..x..x..x:...x:x...x..x::.:............x...x......x.........:.. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 120037856 70176699 +3111 chr4 + 190214555 175812298 175812297 175812393 96 GGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGGGAAGCTCCAACAGCAGTGGCTTGGGCAAGTCCTCAGAGCTTAGCTCAG chr4 - 94230402 58919459 58919458 58919543 35310860 35310859 35310944 85 GGGGTTTTATTTGTTGGTTTTCTTTTTTTTTTTTTTTTGTTCCCCTGG--AGTTTTGCCACAAATTGCTT---------TCAAGGGCTTGGTTCAG ........x...x..xx....:................x..::.....--..:.:::x..xx.:.x....---------::x..:....:.:.... 48M2D20M9D17M 62/85 72.9% 85/94230402 0.0% 11/85 12.9% 116892839 73321716 +3501 chr4 + 190214555 175884607 175884606 175884678 72 CTGCAAGCTCCACCTCCTGGGTTCAAGCAATTCTCGTGCCTCAGCCTCTCGAGTAGCTGGGACTACCAGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:x.:xx.x..:...........::x...x.:x.x........:..:.........:.....xx.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 157687481 32527074 +3215 chr4 + 190214555 175900292 175900291 175900398 107 AAGAAAAGAAAAGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG-------GAAAGG--------AAAGGAAAAGAAAGGAAAGGAAAAGAAAGGAAAG---GAAA------GGAAAGGAAAAAGCCAG chr4 - 94230402 5029081 5029080 5029211 89201192 89201191 89201322 131 AAGTGGAGACAGGAAGGAAGGGCATGAAAAAAAAAAGGGAGAGAGGTCAACAAGAAAAGTACAGCTTAAAGGAAAAAAAGGAAAAGAAAAATAGCCAAAAGCATGAGAGCTGCTGGAAAGGTAACAGCCAG ...x::...x.:.......:..x.x.:...::...:.::..::.:.-------....:.--------.........:..:.:....:....x.:xx:....---..:.------.......x..x...... 46M7I6M8I34M3I4M6I17M 77/107 72.0% 131/94230402 0.0% 24/107 22.4% 170871211 19343344 +3037 chr4 + 190214555 175900312 175900311 175900380 69 GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAAAGGAAAGGAAAAGAAAGGAAAGGAA chr4 - 94230402 13108414 13108413 13108482 81121921 81121920 81121989 69 GGAAACTGAAATAGAAGAAAGTGAGGTAGAGGGAGGAAGTAGAAAGGGAAGAAAAAGAAATGATAAGAA .....xx:..:x.:.:.....x:.:.x.:...:.:.:.:x.......:...:........x..x.:... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 162791898 27422657 +3221 chr4 + 190214555 175901598 175901597 175901655 58 AAAGCTTTATAATTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTCCTTTTTTTTTTTTT chr4 - 94230402 34093627 34093626 34093684 60136719 60136718 60136776 58 AGAGCTATATACTTTTCTCTATTCCCTTTCCCATTTATTTTTTCCTTTTGTTTCTTTT .:....x....x......:.x..:.:...:.:x...x............x...:.... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 141807971 48406584 +3001 chr4 + 190214555 175901608 175901607 175901654 47 AATTTTCTTTTTTTCTTTTTCTTTTTTTTTTTTCCTTTTTTTTTTTT chr4 - 94230402 66510360 66510359 66510406 27719997 27719996 27720043 47 AATCTCTTTTATTTCTCCTTCTTTTTTCTTTTTCCTCTTTTCTTCTT ...:.::...x.....::.........:........:....:..:.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 109391248 80823307 +3122 chr4 + 190214555 175904415 175904414 175904525 111 TGTCTACATACATATGTATACATATACACACACATATATATACACACACATACATGTTCATAAACACATATAAAATGCACACATTTAAAGTAAACATTCTATTTTTTGAGA chr4 - 94230402 72800653 72800652 72800757 21429646 21429645 21429750 105 TGTTTACATATATAT------ATATACACACACATATATAAACCAAAAGAAACGTTTATATGATTAAGCATCCAATGCAGATGCTATAAAAGAACATTGTACATTACGAAA ...:......:....------...................x..xx.x.x.x..:.x.x:..:.x:.x::..xx......x.:::.xx..:x:......x..:x..x:..:. 15M6D90M 70/105 66.7% 105/94230402 0.0% 6/105 5.7% 103103762 87110793 +3739 chr4 + 190214555 175931645 175931644 175931754 110 TTCTGACAGAC---ATGTGTTAAAAAATATACACACACACACACACACACACACACACACACACACACATATATATATATATATATAGCAGAATTATGCAATGAGAGTAGATA chr4 - 94230402 87372712 87372711 87372822 6857581 6857580 6857691 111 TTTTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAATTATGC--CCAGAACAGATA ..:.x......---..:x.xx......xx..:x:x..x...........x.........:x:.:..::..:..::.......x.x.x.x:.........--:x...::..... 11M3I85M2D12M 76/108 70.4% 111/94230402 0.0% 5/108 4.6% 88558933 NA +3111 chr4 + 190214555 175931650 175931649 175931716 67 ACAGACATGTGTTAAAAAATATACACACACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395804 8395803 8395870 85834533 85834532 85834599 67 ATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .:.:......:..x.x.x..:..::.x:...:xx.:.................x.....x..:x... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 167535846 22678709 +3039 chr4 + 190214555 175931652 175931651 175931721 70 AGACATGTGTTAAAAAATATACACACACACACACACACACACACACACACACACACACATATATATATAT chr4 - 94230402 87372724 87372723 87372793 6857610 6857609 6857679 70 AGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...:.x.x.xx.....x...x:x..x...........x.........:x:.:..::.::..::....... 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 88558928 NA +3114 chr4 + 190214555 175936308 175936307 175936407 100 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATACATTCCTGTTATATAATAAAATTAAAATAATTTCCAGGCATACCTTTCCTTCATTGCACTTTCCTC chr4 - 94230402 30784826 30784825 30784917 63445486 63445485 63445577 92 AGGAAAAAAAGAAAAAAGATAAAAAAGCACTACACCTTTCTTTTATACAATGAAGGGCAAA--------AAGAAAACCTACACTTCTTTCAACATTTCTC .::.......:......:.x......:x....:..x..:..x.....:...:..:xxx...--------.:.x.x....x:x....x..xx..x..:... 61M8D31M 64/92 69.6% 92/94230402 0.0% 8/92 8.7% 145151482 45063073 +3332 chr4 + 190214555 175964267 175964266 175964329 63 ACCAAACTCTATGTTGTCCAAAAACAAACAAACAACAACAACAACAACAACAACAAAACCCAC chr4 - 94230402 79949121 79949120 79949180 14281223 14281222 14281282 60 ACCAAGCT-TACTTTGGTCAAAAACAAACAAACAACAACAACAACAAAAAC--CTAACCCCAC .....:..-..:x...x:.............................x...--.x..x..... 8M1D42M2D10M 52/60 86.7% 60/94230402 0.0% 3/60 5.0% 96015146 94199409 +3010 chr4 + 190214555 175964274 175964273 175964333 60 TCTATGTTGTCCAAAAACAAACAAACAACAACAACAACAACAACAACAAAACCCACCCAG chr4 - 94230402 15430280 15430279 15430339 78800064 78800063 78800123 60 TCTTTTTCCTCAGGAAAAATACAAATAACAACAACAACAACAAAAAAAAAACACACACAG ...x.x.:x..x::...x.x.....:.................x..x.....x...x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 160533994 29680561 +3112 chr4 + 190214555 175999728 175999727 175999785 58 ATGATACCAGGAAAAAAACAAAAACAAAACAAAACAAAAAAACTGGATTCCATTTGTT chr4 - 94230402 36076694 36076693 36076751 58153652 58153651 58153709 58 ATTAAACCAGAAGAAAAACAAAAACCAAACAAAACAAATAAACAGTATAAAATTTATT ..x.x.....:.:............x............x....x.x..xxx....:.. 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 139923034 50291521 +3265 chr4 + 190214555 176015203 176015202 176015303 101 ATAAACTTTGGCTTTTAAAGAGCTCATAGTATCTACATTTAAAATATATAATTTCTTTCTTTCTTTCTTTCTTTCT----------------TTCTTTTTTTTTTTTTTGAGACGGA chr4 - 94230402 17094955 17094954 17095062 77135341 77135340 77135448 108 ATACACTTTGTTTTCT-------TCATAAGAT--ACATCTGAAATATATGTTTTCTTTTTTTCTTTCTTTCTCTTTCAATGCATAACACCACTTGTTTATTTTTTATCTCAGAGGAA ...x......x:..:.-------.....:x..--....:.:........:x.......:.............:.:.----------------..x...x......x.:.x...x.:. 16M7D9M2D42M16I25M 72/92 78.3% 108/94230402 0.0% 25/92 27.2% 158920248 31294307 +3157 chr4 + 190214555 176015868 176015867 176015911 44 CAGTTGAGAAAGCAAGTTTCTCTTTTTCTTTTTTCTTTTTTCTT chr4 - 94230402 90562375 90562374 90562418 3667985 3667984 3668028 44 CAGTTGAGAGAGCACGCTTTCCTTTTTCTTTTTTTTTTTTTCCT .........:....x.:..::.............:.......:. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 85453493 NA +3054 chr4 + 190214555 176031691 176031690 176031738 48 ACAAAAACAAACAAACAAACAAAAACGGCAATAAAAAAAACAAACCGC chr4 - 94230402 68627834 68627833 68627881 25602522 25602521 25602569 48 ACAAAAACAAACAAACAAACAAAAATAACAGGAAAAAAAATCAGCTAC .........................:::..:x........:x.:.::. 48M 38/48 79.2% 48/94230402 0.0% 0/48 0.0% 107403857 82810698 +3197 chr4 + 190214555 176041950 176041949 176042023 74 TGTGTTGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964811 14964810 14964884 79265519 79265518 79265592 74 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...xx....::..x....:.x.:::.:.::....::::.:::.:.:...xx........::............. 74M 48/74 64.9% 74/94230402 0.0% 0/74 0.0% 161077139 29137416 +3247 chr4 + 190214555 176041950 176041949 176042020 71 TGTGT-TGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395791 8395790 8395862 85834541 85834540 85834612 72 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .....-..x:......x.:..:...x..:...:::.::.x:...:xx.:.................x..... 5M1I66M 52/71 73.2% 72/94230402 0.0% 1/71 1.4% 167646159 22568396 +3297 chr4 + 190214555 176041951 176041950 176042025 75 GTGTTGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964810 14964809 14964884 79265519 79265518 79265593 75 GTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ......x:x:..:.x....:.x.:::.:.:.....::::.:::.:.:...xx........::............. 75M 49/75 65.3% 75/94230402 0.0% 0/75 0.0% 161077141 29137414 +3061 chr4 + 190214555 176041954 176041953 176042007 54 TTGGATGCATATATATATATATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964831 14964830 14964884 79265519 79265518 79265572 54 TTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x:..:::.:.::.:...:........xx........::............. 54M 40/54 74.1% 54/94230402 0.0% 0/54 0.0% 161077123 29137432 +3064 chr4 + 190214555 176041955 176041954 176042016 62 TGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395801 8395800 8395862 85834541 85834540 85834602 62 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x..:x.:..:...x..:....:..::.x:...:xx.:.................x..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 167646154 22568401 +3267 chr4 + 190214555 176041955 176041954 176042032 78 TGGATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACACACATATA chr4 - 94230402 8395793 8395792 8395870 85834533 85834532 85834610 78 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..x...::.::...x.:..:...x....:.:::.::.x:...:xx.:.................x.....x.::x... 78M 52/78 66.7% 78/94230402 0.0% 0/78 0.0% 167646162 22568393 +3023 chr4 + 190214555 176041958 176041957 176042010 53 ATGCATATATATATATATATATACACACACACACACACACACACACACACACA chr4 - 94230402 8395810 8395809 8395862 85834541 85834540 85834593 53 ATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:..x..:....:...::x....:xx.:.................x..... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 167646148 22568407 +3123 chr4 + 190214555 176041961 176041960 176042014 54 CATATATATATATATATATACACACACACACACACACACACACACACACACACA chr4 - 94230402 8395809 8395808 8395862 85834541 85834540 85834594 54 CATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:...x..:....:...:.x:...:xx.:.................x..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 167646152 22568403 +3403 chr4 + 190214555 176041997 176041996 176042057 61 CACACACACACACACACACACACACACACACATATATATGTATATATATTTAGGAGAGTTA chr4 - 94230402 87372747 87372746 87372807 6857596 6857595 6857656 61 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAATTA ..x...........x.........:x:.:..:...:..:........x.:.x.::..:... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 88669250 NA +3109 chr4 + 190214555 176076197 176076196 176076288 92 TGTATGTTTACATATATAATATATATATATATATATATATATATATATATATATATATACACACACACACACATATATATACATGTAAGCAA chr4 - 94230402 8395789 8395788 8395875 85834528 85834527 85834614 87 TGTGTGTATGTGTGCATAA-----ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ...:...x.:::.::....-----.:..:...x..:....:...::x..:..xx...:...............x.:.:.x.::x:...:x.. 19M5D68M 58/87 66.7% 87/94230402 0.0% 5/87 5.7% 167680408 22534147 +3244 chr4 + 190214555 176076211 176076210 176076279 69 TATAATATATATATATATATATA----TATATATATATATATATATATACACACACACACACATATATATACA chr4 - 94230402 24136189 24136188 24136261 70094142 70094141 70094214 73 TAGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACA ..x...:.::........x...:----.:.x......:.....:...:.x...x...x.....:....x.... 23M4I46M 53/69 76.8% 73/94230402 0.0% 4/69 5.8% 151940022 38274533 +3066 chr4 + 190214555 176133247 176133246 176133326 80 TCTCCTCTCTCTAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAAGAGAAAGGAAAATCACTTCCACCATTAACTCCTAA chr4 - 94230402 59404629 59404628 59404708 34825695 34825694 34825774 80 TCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAAAATGCAGTAAGAAATATGAAATGAAGCACTGCCTCTTAA ..:..:.:.:.:...................:....x:x.:..x:x..x...:..x..x.xx.xx.x..:.:x...:... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 116728618 73485937 +3504 chr4 + 190214555 176139105 176139104 176139228 124 AGAAGTTAAAACTATATTTACACAGCAACCTTAAGCTACAAGATAAAAAGTCACTTTAGTTTCCTCTTAATGGAA-----------TTTAAGTACTATATAAAGTAGAACTGTTTTTAATTAAAATTTAGAAATG chr4 - 94230402 70629726 70629725 70629837 23600566 23600565 23600677 112 AAAAATTAAGACTATATTTACACAACAACCTTAGGTTACAAAATAAGTGG---------------CTGAAGAGAATAGCAGACATCTTTAAACACTA---AATGTTGAACTCTCTTT-----AGATTTGGGAATG .:..:....:..............:........:.:.....:....:x:.---------------..x..x:...-----------.....::....---..x..x.....x.:...-----.:....:.:.... 50M15D10M11I11M3D17M5D13M 79/101 78.2% 112/94230402 0.0% 34/101 33.7% 105509379 84705176 +3159 chr4 + 190214555 176159284 176159283 176159337 54 CACACACACACACATACACACACACAGATGGAGAGAGAGAGAGAGAGAGAGAAA chr4 - 94230402 67652084 67652083 67652137 26578266 26578265 26578319 54 CACACGTACAGACATACATACCAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAAA .....::...x.......:..xx.x.:.x::.:..................... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 108507200 81707355 +3113 chr4 + 190214555 176182347 176182346 176182429 83 TATGTATGTGTATATATATACATGTATGTATGAAATATATATATGTGCGTGTGTGTGTGTATATATATATATATATATATATA chr4 - 94230402 35554923 35554922 35555005 58675398 58675397 58675480 83 TATGTCTTTCTGTCTTTACAATTTTAAGTATAGGCTAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATA .....x.x.x.:.x.x..:.xx.x..x....:::x..x......x..x.........:::....:x:.:.........::... 83M 56/83 67.5% 83/94230402 0.0% 0/83 0.0% 140627424 49587131 +3249 chr4 + 190214555 176210774 176210773 176210847 74 CTTTTTCTTCTTTT-TCTCCTGCTTCTTTCCTTTCTCTTTCGTTTCTTTCTTCTTTCTTTCCTCTTTCTTTTCTT chr4 - 94230402 22629303 22629302 22629377 71601026 71601025 71601100 75 CTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .....::.......-.:..x..:.:x.x.:.x........:...:x...x......x:.....:::...:...:. 14M1I60M 53/74 71.6% 75/94230402 0.0% 1/74 1.4% 153581471 36633084 +3364 chr4 + 190214555 176210815 176210814 176210885 71 TTTCTTTCTTCTTTCTTTCCTCTTTCTTTTCTTTCTCTCTTATTTATTTATTCATTCGTTCTTTCTTCTTT chr4 - 94230402 22629305 22629304 22629373 71601030 71601029 71601098 69 TTTCTTTCTT--TTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCT ..........--.......x.x..:x.x...x......:..:..:........x..xx...:...:...:. 10M2D59M 54/69 78.3% 69/94230402 0.0% 2/69 2.9% 153581510 36633045 +3497 chr4 + 190214555 176219391 176219390 176219486 96 TATATTTGTATGATATATAAATATATATATGTATGATATATAAATATATATATTTGTATGATATATAAATATATATATTTGTATGATATATAAATA chr4 - 94230402 30817369 30817368 30817459 63412944 63412943 63413034 91 TATATATATGTGATATAGCAA-----GCATATGCAATATATAGTTATATATTTTAGTGTGTTGTGTGTGTATATATATTTAAATGCTATATGACTA .....x.:.:.......xx..-----::..:.:::.......:x.......x..x..:..x.:.:.:x:...........:x...x.....:.x.. 21M5D70M 64/91 70.3% 91/94230402 0.0% 5/91 5.5% 145402022 44812533 +3000 chr4 + 190214555 176219526 176219525 176219612 87 ATATATAAATATATATATGTATGATATATAAATATGTATATATTTGTATGATATATATATATATATATATATATATATATATATATA chr4 - 94230402 78881523 78881522 78881609 15348794 15348793 15348880 87 ATATTGAAATTTATATCTGCAATATGCTTTCAAACAAACATATTTGTAGATAATTAATATATACATACACAAATATATATATGTATA ....xx....x.....x..:.xx..::x.xx.x.::x.:.........x:xx..xx.......:...:.:.x..........:.... 87M 59/87 67.8% 87/94230402 0.0% 0/87 0.0% 97338003 92876552 +4745 chr4 + 190214555 176227584 176227583 176227688 105 TTGTTTTATCCTCACCCTGATCCTTTGAGGTTGGCG-CTATTATTATCTCTGTTTTCCAGGTGAGGAAACTGAGACATGCAGAAGTTAAATAACTTGCCTAAGGTC chr4 - 94230402 10729157 10729156 10729262 83501141 83501140 83501246 106 TTGATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ...x....x......xx.:x:...x......x..::-:..:...:.x...::....x......:.:........:..:::.x.:.....:...:.....:.::... 36M1I69M 74/105 70.5% 106/94230402 0.0% 1/105 1.0% 165498427 24716128 +3263 chr4 + 190214555 176227622 176227621 176227823 202 ATTATTATCTCTGTTTTCCAGGTGAGGAAACTGAGACATGCAGAAGTTAAATAACTTGCCTAAGGTCACACAGCTAGAAAGGGGTGGATGT---------------AAAATTCAAACTGCAGCCTCCTACC------TGCAGTGACAACACTTTTCACTTGTTGA-GAGATAGCAAT---------CCTATCTCTCAATACACACACACTCTCTCTC----------ATGCACAGAGTCTGTG chr4 - 94230402 15193219 15193218 15193459 79036944 79036943 79037184 241 ATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAATTTATAGTCCCCATACCAAAATCTATTCTCCAGCCACTTAACAATGTGAGAAGTG-CAGCCCTTTTTTTGTGCAGGTGACACTGCAACAAAGTAAAACTCATTTTTTAGTACAC-CAAAGCCTCCCTCTTACTTGCATATGCAGACAGCCTGTG ......x..:x::....x:.xx..::.:..:...:..x::x.x..:.x.........x..........:......x.xx..:::.::.xx.---------------.....::.xx..x.....x.:..x.------x.x....-..:.x.....:x:x..:x.:-..x.:x....:---------.::..:.:.:.:.....-..x.x:...:...----------.....x.x..:..... 91M15I25M6I7M1D20M1I11M9I17M1D13M10I16M 131/200 65.5% 241/94230402 0.0% 43/200 21.5% 161034403 29180152 +3030 chr4 + 190214555 176252063 176252062 176252125 63 CTCAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAGACACGCATATAAAATATTTTT chr4 - 94230402 25002877 25002876 25002939 69227464 69227463 69227526 63 CTTGACAATAGAAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATATCATT ..::.x..x.:......x...x...x....x....x.....:..x.:..:.........:x.. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 151249186 38965369 +3310 chr4 + 190214555 176260655 176260654 176260721 67 TTGTTGCTGTTGTTTGTTTTTGTTTGTTTGTTTTGTTTTTTTGAGACGGAGTCTAGCTCTGTTGCCA chr4 - 94230402 71837907 71837906 71837972 22392431 22392430 22392496 66 TTTTTGGTGGTTTTTTTTTTTGTTTGTTTGTTTTGTTTTTTTTAAATAGAAGCCAG-TCTGTGACCA ..x...x..x.x...x..........................x.:.::..:x.:..-.....x:... 56M1D10M 52/66 78.8% 66/94230402 0.0% 1/66 1.5% 104422748 85791807 +3355 chr4 + 190214555 176288181 176288180 176288267 87 CCTTCCCCTACCTTCCTTCTTTTTCTTTCCTCTTTCTTTTCTCTTCCT------TTCTTTCCTTTCTTTCTCTTCTTTCTTTCTTGCTTGCTT chr4 - 94230402 4731690 4731689 4731782 89498621 89498620 89498713 93 CTTTCCTCTACCTATCTTCTTTTTCTTTCATTCATCTGCTCCCTCCCTATTTGCTTTTTGCTCTTCTTAATCCTCCTGCATTTTTATTCCCTT .:....:......x:..............x.::x...x:..:..:...------..:..x.::.....xx..:..:.x.x..:..::.:x... 48M6I39M 60/87 69.0% 93/94230402 0.0% 6/87 6.9% 171556491 18658064 +3075 chr4 + 190214555 176324425 176324424 176324457 33 TTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 - 94230402 4472007 4472006 4472039 89758364 89758363 89758396 33 TTTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT ................................. 33M 33/33 100.0% 33/94230402 0.0% 0/33 0.0% 171852418 18362137 +3244 chr4 + 190214555 176324426 176324425 176324461 36 TTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTTCTG chr4 - 94230402 64800068 64800067 64800103 29430300 29430299 29430335 36 TTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTTCCTG ................................:... 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 111524358 78690197 +3039 chr4 + 190214555 176325721 176325720 176325782 62 GGTTTTTTGTTGTTGTTGTTGTTTTTATTTATTTATTTTTAACACGGAGTTTTACTCTTGTT chr4 - 94230402 12266170 12266169 12266226 81964177 81964176 81964233 57 GGGTTTTTGTTGTTGTTGTTGTTTTGTTTGATTTTTTTTTAATGAGGA-----ACACTTGTT ..x......................xx..x....x.......::x...-----..x...... 48M5D9M 48/57 84.2% 57/94230402 0.0% 5/57 8.8% 164059551 26155004 +3021 chr4 + 190214555 176327321 176327320 176327381 61 AAAAGAGAGAAAGATGTATTTTTATTTTAAAGAAAAATACTTGAGAGTAAAAGGAGAAAAA chr4 - 94230402 83076552 83076551 83076612 11153791 11153790 11153851 61 AAAGGAGAGAGTGTTGTGTTTTTACTGTAAAGAAAGACATTTGGGGGAGGGAGGGGAACAA ...:......:x.x...:......:.x........:.:.:...:.:.x:::...:...x.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 93250769 NA +3609 chr4 + 190214555 176328408 176328407 176328499 92 GTATTGTTGGTTTGTTTTTTGGTTTTGGGTTTTTTTTTTTTTTTTTTTGGTATAAGAACTAACATCAAAAGGCCTGTTTAAAGGGAAAGGTT chr4 - 94230402 60053861 60053860 60053936 34176467 34176466 34176542 76 GTTTTATGTGTTTCTTTTTTGGTTTTGGGTTTTTTTTTTTTTTTTCTTG----------------TAAAAAGTCTGGTGGAAGAGCAGGATT ..x..:.xx....x...............................:...----------------:....:.:...x.x:...:.x.:.:.. 49M16D27M 60/76 78.9% 76/94230402 0.0% 16/76 21.1% 116274547 73940008 +3098 chr4 + 190214555 176334627 176334626 176334695 69 GGGAATATATATATACACACACACACACACACACACACACACACACACATATATACATATATATATGTT chr4 - 94230402 87372730 87372729 87372798 6857605 6857604 6857673 69 GAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT .:...x.x.xx...x:x..x...........x.........:x:.:..:...:...:.......x.x.. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 88961897 NA +3349 chr4 + 190214555 176414468 176414467 176414590 123 CATTACTGTGACTGTCAATATTTTTCATAGGAGAGACATCTAGTGCACTGTGATCACATTTTCAGTCTTGTGTGTATATATATATATGTGTGTGTGTGTGTATATATATTTTTCTTCTCAAGG chr4 - 94230402 34493672 34493671 34493780 59736623 59736622 59736731 109 CAGTTCTGTGTGTTTCAGGATCTTCTGT-GGAAAAACA-------------GATCACATTTTGAGTGTTGTTTCCTTATGTATGTTTCTGAGTGTGTGTGTGTGTGTATTTGCCCCCTGTAGG ..x.x.....xx.x...:x..:..:::.-...:.:...-------------...........x...x....x.x:x...:...:.x.x..x..........:.:.:.....x:.::..xx... 28M1D9M13D72M 76/109 69.7% 109/94230402 0.0% 14/109 12.8% 141920796 48293759 +3292 chr4 + 190214555 176414542 176414541 176414584 43 TATATATATATATGTGTGTGTGTGTGTATATATATTTTTCTTC chr4 - 94230402 27034826 27034825 27034868 67195535 67195534 67195577 43 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTC ...........:....................:x...:.:... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 149379716 40834839 +3506 chr4 + 190214555 176414544 176414543 176414586 43 TATATATATATGTGTGTGTGTGTGTATATATATTTTTCTTCTC chr4 - 94230402 27034826 27034825 27034868 67195535 67195534 67195577 43 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTC .........................:......::......:.. 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 149379718 40834837 +3371 chr4 + 190214555 176434718 176434717 176434873 156 CTTCCTTCTTTCATTCCTTCCTTCCTCCCTTCCTTCCTTCCTTGTTCCCTCCCTCCCTCCCTTCCTTCCTCTCTTCCCTTCTTCCTCCC---TCCCTCCCTCTGTCCCTTCCTTCCTTCCTTCCTTGCTT---------CTTTTCTTTCTTCCTTCCTTCCATTTTTT chr4 - 94230402 91731732 91731731 91731898 2498505 2498504 2498671 167 CTCCCAGCTCTGGGTTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTC-TCCATCTCTT ..:..xx..:.x:x.:::..x..:..::..x.:..x...:.:.x::....:...::.......:xxxxx........x..::.......---..:.xx.x.:.:.:x..:..:x:..:.:x:x......x---------..:::.x..x....:.:.-.....:.:.. 89M3I38M9I18M1D10M 94/155 60.6% 167/94230402 0.0% 13/155 8.4% 84702986 NA +4516 chr4 + 190214555 176479565 176479564 176479742 178 AGGAAGAAGAGAAAGAAGAAGAGAAAGAGGAATAGGAGGAAGAGGAGGAAGAGGAAGAGGAGGAAGAGGAAGAGGAGGAAGAGAAAGAGGAGGAAGAG------------------GAAGAGGAGGAAGAGAAAGAGGAGGAAG---------AGGAGGAAGAAGAAGAGGAAGAA-----------GAAGAAGAGGAAGAAGAAGAAGAGGAAGA chr4 - 94230402 27548044 27548043 27548254 66682149 66682148 66682359 211 AGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACA---AAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAG--AGAAAAGACAGAGGAAGA ....:......:..::.:.xx..xx:......:.::.:...xx:.x....x.---.:.x:.......::..x..:::x.....xx...:.........------------------:..xx.:..x............xx..:.---------.:x.::.::....x.........-----------....:.:..--....:.::x......... 52M3D43M18I28M9I23M11I9M2D18M 120/173 69.4% 211/94230402 0.0% 43/173 24.9% 148931521 41283034 +4704 chr4 + 190214555 176479566 176479565 176479748 183 GGAAGAAGAGAAAGAAGAAGAGAAAGAGGAAT------AGGAGGAAGAGGAGGAA---------GAGGAAGAGGAGGAA------GAGGAAGAGGAGGAAGAGAAAGAGGAGGAAGAGGAAGAGGAGGAAGA------------------------GAAAGAGGAGGAAGAGGAGGAAG---------AAGAAGAGGAAGAAGAAGAAGA------------GGAAGAAGAAGAAGAGGAAGAAGAAGA chr4 - 94230402 27548006 27548005 27548254 66682149 66682148 66682397 249 GGAAGAACTGAGGCAACACGAGACTGAGAAATGGTGTCAGGAGGAAGAGGAAAGAAATCAGCTGGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAGAGGAAGA .......xx..::x..x.x....xx...:...------.............:::.---------......x.::.:...------..:x..:.x:.......:...x..:::x.....xx...:........------------------------...:x.:...:......xx..:.---------..x..:..:....x..:.....------------.:.:...::....:..:x...:..... 32M6I17M9I15M6I47M24I23M9I22M12I27M 132/183 72.1% 249/94230402 0.0% 66/183 36.1% 148931560 41282995 +4658 chr4 + 190214555 176479566 176479565 176479743 178 GGAAGAAGAGAAAGAAGAAGAGAAAGAGGAATAGGAGGAAGAGGAGG---AAGAGGAAGAGGAGGAAGAG---GAAGAGGAGGAAGAGAAAGAGGAGGAAGAGGAAGAGG---------------AGGAAGAGAAAGAGGAGGAAGA------------GGAGGAAGAAGAAGAGGAAGAAGAAGA-----------------AGAGGAAGAAGAAGAAG-AGGAAGAA chr4 - 94230402 27548069 27548068 27548297 66682106 66682105 66682334 229 GGAGGAACAAAAAGAACTAGTGGAACAAAATAAGGAAGAAAAACAGAGACAAGAGCTAGAAGAGGAAGAGCTTCCAGAAGCTGAAATAAAACTGAAGCAAGAGAAAGAGGTTGAGGGCCCCAGCCAACAAAAGAAAGACGAGGAAGAAATGCAGCATTTGAAGGAAAGAGAAAAGACAGAGGAAGACCAACCCCAGCAGCTACCGGAGAAGAAACAGAAGCAGGAAGAA ...:...x.:......xx..x.:..x.::.xx....:...:.:x..:---.....xx...:.........---xx...:.xx...:x:...xx.:..x.....:......---------------.:x..:.......x........------------.:.....::....:..:x...:.....-----------------x.::......:x.....-........ 47M3I20M3I37M15I22M12I27M17I17M1I8M 129/178 72.5% 229/94230402 0.0% 51/178 28.7% 148931497 41283058 +3307 chr4 + 190214555 176486915 176486914 176487040 126 ACAGTGAAATTCCCTCTCAAAAAAAAAAAAAAAAAAAAAG-GAAAAGAAAAAATGAAACTAAAATGAGAATAACGAACT-----AACCCA--------ACAAAAGAAATAATAAATATTAGAATAGAAACTAATAAGATG chr4 - 94230402 4077719 4077718 4077856 90152547 90152546 90152684 138 ACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCAAGAAGAGGGAACAGAGGCTGGGAAAACCTACTTGGGGGGCAAAAGGAATCAGGGAAAGTAAAAAGGGAAATG--AAGATG ...........:.:...x.............x.::...:.-......:..:....:xx.x.:..x::.:.xx.x:::..-----....:.--------:......:...x.x::.x.x..:..x:.:..x.:--...... 40M1I38M5I6M8I34M2D6M 85/124 68.5% 138/94230402 0.0% 16/124 12.9% 172409196 17805359 +3057 chr4 + 190214555 176500183 176500182 176500265 83 TGCCGAATA-----CATAAAACATATAA---AATATAATCACACACACACACACACACACACACACACACATATATATATGTATACATATA chr4 - 94230402 87372702 87372701 87372792 6857611 6857610 6857701 91 TGCTGAGTAATTTTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ...:..:..-----..:.:.x:.x....---..x.x...:.:x:x..x...........x.........:x....::......:::..... 9M5I14M3I60M 60/83 72.3% 91/94230402 0.0% 8/83 9.6% 89127481 NA +3198 chr4 + 190214555 176500187 176500186 176500259 73 GAATACATAAAACATATAAAATATAATCACACACACACACACACACACACACACACACATATATATATGTATA chr4 - 94230402 87372720 87372719 87372792 6857611 6857610 6857683 73 GACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATA ..x..x....:.x.x.x...x...xx:..x...........x.........:x:.:..:...:..::.:.... 73M 52/73 71.2% 73/94230402 0.0% 0/73 0.0% 89127467 NA +3054 chr4 + 190214555 176500222 176500221 176500273 52 CACACACACACACACACACACACATATATATATGTATACATATACATATATT chr4 - 94230402 87372747 87372746 87372798 6857605 6857604 6857656 52 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ..x...........x..........x....::.:.:...:....:..x.x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 89127475 NA +3006 chr4 + 190214555 176500224 176500223 176500275 52 CACACACACACACACACACACATATATATATGTATACATATACATATATTTT chr4 - 94230402 87372747 87372746 87372798 6857605 6857604 6857656 52 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTT ..x...........x.......:..x....:....::.::..:....x.:.. 52M 40/52 76.9% 52/94230402 0.0% 0/52 0.0% 89127477 NA +3250 chr4 + 190214555 176506613 176506612 176506713 101 TAGAATTTGAAGTCCTTGCAGGCCTTGGGACTCTTTCTTCTGTTGAGCTCTAGAGAAGCACTTCACTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAACTT chr4 - 94230402 38976901 38976900 38976999 55253404 55253403 55253502 99 TAGGATCTG--GTACTTCTCAGTTTTGGCTCTTATTCTTTTGTGTATCTCTAAACTGAAAGTTTGCTTTTTCTTGTTTTTTTTTTTTTTCCTTGCAAACTT ...:..:..--..x...x:x:.::....xx..:x.....:...xx.x.....:.xx::x.x..::.........x:.............::..x:x..... 9M2D90M 66/99 66.7% 99/94230402 0.0% 2/99 2.0% 137529712 52684843 +3170 chr4 + 190214555 176512675 176512674 176512733 59 CTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.......x.:xx...x.xx..........::.:.........:......x.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 158315536 31899019 +3118 chr4 + 190214555 176520485 176520484 176520543 59 AAAAGAAAAGGAAAGGCCAAGAGGTAGCAACAAACAAACAAACAAACAACAAAATCTTG chr4 - 94230402 38842331 38842330 38842389 55388014 55388013 55388072 59 AAAACAAAAAAAAAAGCGAAGCAGCAACAGCAACAAAACAGACAAACAAAAAAACCTTG ....x....::...:..x...x:.:.:..:...xx.....:........x....:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 137678154 52536401 +3523 chr4 + 190214555 176524922 176524921 176525000 79 TGAGGTAG--CACTACTATTATTTTCATTTTATAGATGAGGAAACTGAGATACCAAAATGTTAAGTAACTTGGTAAAGGTC chr4 - 94230402 10729182 10729181 10729262 83501141 83501140 83501221 81 TGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ........--x.:......:.x:.:.......:..:..:.:........::..xx.x.x.........:...x:x.::... 8M2I71M 57/79 72.2% 81/94230402 0.0% 2/79 2.5% 165795740 24418815 +3395 chr4 + 190214555 176540036 176540035 176540118 83 GAGTCACTTTTTTCTTTTC---TTTTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAA chr4 - 94230402 44513355 44513354 44513440 49716963 49716962 49717048 86 GAGACGCTTTTCTTTTTTCACACTGCTATATGATGTCCTTTTCCCTTTAATTTTTTCCTTTTCTCCCTTAAAAAAAAAAAAAAAAA ...x.:.....:.:.....---:.x::x.x.xx.x..:....::....xx......::....:.:::................... 19M3I64M 59/83 71.1% 86/94230402 0.0% 3/83 3.6% 132026681 58187874 +3456 chr4 + 190214555 176540037 176540036 176540157 121 AGTCACTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAGGAAAAGAGTGCCCTTCTGTGAAAGAAGAATG chr4 - 94230402 90686012 90686011 90686126 3544277 3544276 3544391 115 AGTTAGTTATTTCTTCACGTTTCACTTGAATTCACTTTTTTTACCCTTTTTTTTTTGTTTGTTTTTTAAATAAAGACAAGAAGATCGGCAGTAAATATTGCCCT------GAAGAAGGGTG ...:.x..x......:x.x....x:..xxx...x:.....:.x:.:..........x...x....xx...x...:.x..:....xx:xx:.x...x.x......------:......::.. 104M6D11M 78/115 67.8% 115/94230402 0.0% 6/115 5.2% 85854025 NA +3100 chr4 + 190214555 176540046 176540045 176540126 81 TTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAG chr4 - 94230402 63646693 63646692 63646773 30583630 30583629 30583710 81 TTTAGTCTCTGTGCCTTTTTCTTCTTCTTTTTTATTTTTTTCCTTTTAAATTTTTGAAAGAGCAATAAAAGAACTAAGCAG ...xx.:...x.x.:...:.:.....:....:.x.:.....::....xxx.....x...:.:x..x....:..xx..:... 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 112893353 77321202 +3397 chr4 + 190214555 176540047 176540046 176540145 99 TTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAGGAAAAGAGTGCCCTTCTGT chr4 - 94230402 2972469 2972468 2972556 91257847 91257846 91257934 88 TCTTTTTCTTTTTCTTTTTTTTCCTTTTTACTTCCCTATTTTTATCTGCTTT-----------GATCAGAAAGAAAACAGGTAATGTGTGCAATTGTGT .::.........::...:.....:.....x...:.:.x.....x.:.x:...-----------:.xx.:............x..x.x....xx..x... 52M11D36M 64/88 72.7% 88/94230402 0.0% 11/88 12.5% 173567578 16646977 +3236 chr4 + 190214555 176540056 176540055 176540131 76 TTTCTTTTCTTTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAACAGGAAAA chr4 - 94230402 3462450 3462449 3462524 90767879 90767878 90767953 75 TTTCATATCACTTCCTTTTTTTTTTCTTTTTTTCTTTTTAGTACAGAACAAAAGGAAAAAAGACAGAA-AGGAAAA ....x.x..x:...:......:...........:.....xx.x:xx..x....::......:.x.:..-....... 68M1D7M 56/75 74.7% 75/94230402 0.0% 1/75 1.3% 173077606 17136949 +3388 chr4 + 190214555 176540077 176540076 176540123 47 CTTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAGAAAA chr4 - 94230402 73333941 73333940 73333987 20896416 20896415 20896462 47 CTTTCTTTTTTCTTTTTTTTCCCTAAAAAAAAAAAAAAAAAAGATAA ...........:........:::.x...................x.. 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 103206136 87008419 +3167 chr4 + 190214555 176570467 176570466 176570528 62 CTCACCCACCTCTTAACTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAG chr4 - 94230402 7504480 7504479 7504541 86725862 86725861 86725923 62 CTCTCCCCCCTCTCAGCCCACTGCCTCTCACTCCCTATCTTTTTTTTTTTTTTTTTCCTGAG ...x...x.....:.:.:.x:.x::...:x..::..x...................::.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 169065987 21148568 +3086 chr4 + 190214555 176570477 176570476 176570527 51 TCTTAACTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 15963372 15963371 15963422 78266981 78266980 78267031 51 TCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAA ......:x......:.......:.....::::....xx...........:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 160607105 29607450 +3240 chr4 + 190214555 176570583 176570582 176570664 82 CTGCAACCTCTGCCTCCCGGGTTCTAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTATAGACACATGCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACT----ACACGTG-CACCAC ..:..:..:xx:x..:.:......x....x...x.xx.x........:............:.:.----....:..-...... 64M4D7M1D6M 58/77 75.3% 77/94230402 0.0% 5/77 6.5% 158373457 31841098 +3148 chr4 + 190214555 176577585 176577584 176577658 74 CAGATTCTGTCAAGCAGTTTAAAAATCGGCTCTGATTTCTTTCTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 50077874 50077873 50077945 44152458 44152457 44152529 72 CAGATTCTTTTAAGAGGCTGAAAAATGACATTTGGTTTTTTTTTCCCCTTTTTTTCCTTCTT--TTCCATTCTT ........x.:...x:.:.x......x:xx.:..:...:...:..:.:..:.....:.....--..:.x..... 62M2D10M 52/72 72.2% 72/94230402 0.0% 2/72 2.8% 126499711 63714844 +3329 chr4 + 190214555 176599942 176599941 176600089 148 TATATATATATATGCCAGTATTCTATAGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATATGTGT---GTATATTCTATGGTGTGTGTATATATATATGGTGTGTATATATATATGTGTATATATATGTGTGTATATATAT chr4 - 94230402 40224641 40224640 40224781 54005622 54005621 54005762 141 TATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGCATTCAT----------TACACACATAAGTAACTAAATGTTGTTGTCTATATGT ....:....:..xx::xx.:.x.x.:..x:::x:.x.x.............:.:........x...:........---:....x.:.:.x.xx.x..:..x:..----------..:.:.:...x..:xx..x..:.xxx...x.....:. 75M3I26M10D37M 89/138 64.5% 141/94230402 0.0% 13/138 9.4% 136375301 53839254 +3040 chr4 + 190214555 176599962 176599961 176600011 50 TTCTATAGTGTGTGTGTATGTGTGTGTGTGTGTATATATATATATATATA chr4 - 94230402 50558503 50558502 50558552 43671851 43671850 43671900 50 TTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACA ....x.....::.....x..........::...:....:..:....x.:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 126041459 64173096 +3214 chr4 + 190214555 176600088 176600087 176600148 61 ATATGGTG-TGTGTATATATATATGTATTCTATGGTGTATATATATATATATATATATATAT chr4 - 94230402 31428695 31428694 31428756 62801647 62801646 62801708 62 ATATGATACTGACTATAAAGATAAGTATTTTGTGGTGTATCTATATCTATATATATATATAT .....:.:-..xx....x.x...x.....:.:........x.....x............... 8M1I53M 50/61 82.0% 62/94230402 0.0% 1/61 1.6% 145171393 45043162 +3074 chr4 + 190214555 176601676 176601675 176601736 61 TTCTAATATGTCTACACATACACACACACACACACACACACACACACACACACACACACAC chr4 - 94230402 33416693 33416692 33416753 60813650 60813649 60813710 61 TTCTTGCATGTTTACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACAC ....x::....:...:...x.x..x.........:.........x:x......xx.x.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 143184983 47029572 +3127 chr4 + 190214555 176617947 176617946 176618015 69 TCTAAAAGAAAAAAAAAAAAAAGAAGTTCAGGATATAAAAAACAGAAGACAGAAATAAACAACAGAAAA chr4 - 94230402 21213529 21213528 21213597 73016806 73016805 73016874 69 TTTAAAAGAAAAAAAAAAAAAAAAAGTTTTAAAGATTAAGAGAACAAGCCATAGTTGTACAACACAAAA .:....................:.....:x::.x..x..:.:x.x...x..x.:x.:x......x.... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 155404418 34810137 +3014 chr4 + 190214555 176672210 176672209 176672266 57 GAGCAAGACTCTGTCTCAAAAAAACAAACAAACAAAAAAAAAAAACAAAAAAAAAAA chr4 - 94230402 61332581 61332580 61332637 32897766 32897765 32897822 57 GAACAAGGACCTGCTCACAGAAAACAAACAAACAAACAAAAAAAGCAAAATGAAGAA ..:....:x:...:::xx.:................x.......:.....x:..:.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 115339629 74874926 +3008 chr4 + 190214555 176767126 176767125 176767167 42 AAAAAAAAAAAAAAAAAAACAACCAAAAAGAAAAATGAACAA chr4 - 94230402 12814936 12814935 12814977 81415426 81415425 81415467 42 AGAAAATAAGAAAAAAAAACAACCCCAAAGAAAAATGAACAA .:....x..:..............xx................ 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 163952190 26262365 +3431 chr4 + 190214555 176795679 176795678 176795750 72 TTTGTGTTTTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTTTGAGATGGAGTCT chr4 - 94230402 34493717 34493716 34493788 59736615 59736614 59736686 72 TTTGAGTGTTGTTTCCTTATGTATGTTTCTGAGTGTGTGTGTGTGTGTATTTGCCCCCTGTAGGTGGGGTCT ....x..x....x..:x.:...:...x.x..x................:....:::x:.xx..:...:.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 142301962 47912593 +3816 chr4 + 190214555 176854521 176854520 176854594 74 CTGCAACCTCTGACTCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTTTCTAGTAGCTGGGACTACAGGTGCGC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx::..:.:x..........x...x.xx.x...........x.........:......x....:. 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 158657395 31557160 +3279 chr4 + 190214555 176857357 176857356 176857439 83 CTGCAACCTCCACCGCCTGGGTTCAAGCAATTTTCCTGTCTCAGCCTTCCAAGTAGCTGGGATTATAGGCGCCTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx.x.x:...........::x..:x.xx.x.........:...........:.:..:.x.:..--:....::.. 72M2D9M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 158660231 31554324 +3056 chr4 + 190214555 176861728 176861727 176861767 40 CTCCGTCTCAAAAAAACAAAACAAACAAACAAACAAAAAA chr4 - 94230402 4915765 4915764 4915804 89314599 89314598 89314638 40 CTTCCCCTCACAAAAACAAAACAAACAAACAAACAAAAAA ..:.x:....x............................. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 171945963 18268592 +3158 chr4 + 190214555 176873114 176873113 176873212 99 CTTTCTTC-CTTTTCTTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 17018304 17018303 17018403 77212000 77211999 77212099 100 CTTGCTTCACATTGCTTTTTGTCTTTCATTCTCATCAGTAAACTCTTCTCCCATTCTATTCCTCTCTCTCTCCCCTCTCTCCATTTTCTTTCCCTTTCCT ...x....-.x..x....:.x..:...x..:..x.:xx.xxx:::....::.x....x..:..:............::..:.x..:::.::::.:..... 8M1I91M 63/99 63.6% 100/94230402 0.0% 1/99 1.0% 159854810 30359745 +3942 chr4 + 190214555 176873116 176873115 176873280 165 TTCTTCCTTTTCTTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTCCTTCCTTCCTTCTCTTTCTTTCTTTT chr4 - 94230402 45185586 45185585 45185751 49044652 49044651 49044817 166 TTGCTCATTTTCCCTCTT-CCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x:..x.....::....-...xx.:.:xx......x:...x..........:::..:x...:..x.::::....:...:..xx:..:.:....:..:x...xx.--.:..:x..x.:.x:...:..xx.:x:.::.xx..::.:x...:..::::..:xx...... 18M1D86M2I60M 98/164 59.8% 166/94230402 0.0% 3/164 1.8% 131687530 58527025 +4426 chr4 + 190214555 176873124 176873123 176873291 168 TTTCTTTCTTTCCTTCTTTTTCTTTTC---TTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTCCTTCCTTCCTTCTCTTTCTTTCTTTTTCTTTCTTTCA chr4 - 94230402 45185586 45185585 45185752 49044651 49044650 49044817 167 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGC--TTCTCACTACTTGTCTTTCTAACCACC--CCTAATCTCTTATTCTTTTCTCTTTAATCTTTTA ..x..:x:.....:....::.xx.:..---...:.x:...x........:..::..:x.:.:..x....:....:...:..xx:..:.:....:..:x...xx.x.--.:..:x..x.:.x.......xx.:x..--...xx::...:x......::.:..:xx.....:. 27M3I76M2D27M2D34M 105/164 64.0% 167/94230402 0.0% 7/164 4.3% 131687538 58527017 +3070 chr4 + 190214555 176873128 176873127 176873188 61 TTTCTTTCCTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCT chr4 - 94230402 50985357 50985356 50985417 43244986 43244985 43245046 61 TTTCTTTTTTCCAGTTTGTCTTCTTTTAATTTCTTTATTTCTCTTTATTCTTTTTTTCCCT .......::.:.xx...x.:.......xx.......x.........x..::.:.:.:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 125887771 64326784 +3367 chr4 + 190214555 176873150 176873149 176873224 75 CTTTTTCTTTCTTTCTTTCTCTTTCTTTCTCTCTCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 22629303 22629302 22629377 71601026 71601025 71601100 75 CTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT .....::..::........x:x...x.x:..x:..:.:..:x...x..:x...:..x..........::...... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 154243847 35970708 +3343 chr4 + 190214555 176873179 176873178 176873284 106 TCTCTCCCCTTCCTTCCTTCCTT----------CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTCCTTCCTTCCTTCTCTTTCTTTCTTTTTCTT chr4 - 94230402 93005076 93005075 93005191 1225212 1225211 1225327 116 TCCCGCCCCATCCTCCCCTCCCCGTGCAGCTGCCTGGGCTCATTTCCTTCTTTTGTTCCTTCCCACAACCACTTCTTTTTTTCTGCCTTCCCACCTTTGCTCTCAGTCCTCTTTCT ..:.x....x....:..:...::----------.:xxx..:x:.......:..:x........:x.xx:.x:......:.....x......:x....:x..:..xx..:.:..::. 23M10I83M 69/106 65.1% 116/94230402 0.0% 10/106 9.4% 83868103 NA +3167 chr4 + 190214555 176887072 176887071 176887148 77 CTTTCTTTTCTTTCTTTTTCTCTTTCTTCCTTCCTTCTTTCTTTCTTCTTTCCCTCCCTCCCTCCCTTTCTTTCTCT chr4 - 94230402 34811789 34811788 34811858 59418545 59418544 59418614 70 CTTTTTTTGGTTTCTTTTTTTTTTTATTCCTTTCTTATTTCTGATCACTTTCCCATCCTCC-------TCTTTCACT ....:...xx.........:.:...x......:...x.....xx::x.......x:.....-------......x.. 61M7D9M 54/70 77.1% 70/94230402 0.0% 7/70 10.0% 142075283 48139272 +3974 chr4 + 190214555 176887234 176887233 176887402 169 CTTTCTTTCTTCTTTCTTTTCCTTTCC-----TTTCCCTTTCTTTCT----------TCCTTTCCTCTTT--CTTTCCCCTTCCTCCCTCC---CTCCTTTCC--------------TTCCTTTCTTTCTCTTTCTTTCTCCTTCCT-------TCCTTTCTTTCTGTCTT----TCTCTCTCTCTCTCTTTCTTTCTTTTCTTTCTTCTTTCT chr4 - 94230402 92912836 92912835 92913049 1317354 1317353 1317567 214 CTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCT ..:..:..xx:::.:.......x....-----:.x.....:......----------.:...:..x...x--..:..:.:.:.........---...x.....--------------:.x:..::..........:..:......:.-------..:.x.::.x..:.:..----...:....:x..::.xx...x:x.x:..:...x..:... 27M5I15M10I13M2I19M3I9M14I30M7I17M4I39M 118/169 69.8% 214/94230402 0.0% 45/169 26.6% 83974398 NA +3008 chr4 + 190214555 176887291 176887290 176887350 60 TTCCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTCTCTTTCTTTCTCCTTCCTTCCT chr4 - 94230402 43496261 43496260 43496320 50734083 50734082 50734142 60 TTCTGCTTTCTACCACCCTCCTTTCCCTCCTTTCTTCTTCTTCTGCTGTTGTTTCTTCTT ...:x...:..x..x...........:.........::....::x:.x.:x..:....:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 133391030 56823525 +3114 chr4 + 190214555 176887333 176887332 176887408 76 TCTTTCTCCTTCCTTCCTTTCTTTCTGTCTTTCTCTCTCTCTCTCTTTCTTTCTTTTCTTTCTTCTTTCTTTCTCT chr4 - 94230402 28804043 28804042 28804118 65426285 65426284 65426360 76 TCATTCTTTCTCCTATCTATTTTTCTGAATTATTCTTTCTCTGTTTTTGTCAGTTTTCTCTTTTCGCTCTTTTTCT ..x....:::....x:..x.:......xx..x:...:.....x.:...x.:xx......:.:...x:.....:... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 148083290 42131265 +3084 chr4 + 190214555 176934954 176934953 176934994 41 TGCACAATGTGCAGGGGTTTTTTTGTTTGTTTGTTTGTTTT chr4 - 94230402 16311198 16311197 16311238 77919165 77919164 77919205 41 TGCACAATTTGTTGGGTTTTTTTTGTTTGTTTGTTTGTTTT ........x..:x...x........................ 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 160623756 29590799 +3334 chr4 + 190214555 176934971 176934970 176935027 57 TTTTTTTGTTTGTTTGTTTGTTTTATTTATTTATTTATTTTTTAATTT--TTTTTATTA chr4 - 94230402 67803894 67803893 67803952 26426451 26426450 26426509 59 TTTTTTTGTTTGTTTGTTTCTGTTGCTTTCTGATTTTTTTTTTAATTTGCTTTTTATTA ...................x.x..::..x:.x....x...........--......... 48M2I9M 49/57 86.0% 59/94230402 0.0% 2/57 3.5% 109131077 81083478 +3043 chr4 + 190214555 176934973 176934972 176935027 55 TTTTTGTTTGTTTGTTTGTTTTATTTATTTATTTATTTTTTAATTTTTTTTATTA chr4 - 94230402 30150573 30150572 30150627 64079776 64079775 64079830 55 TTTTTGTTTATTTGTTTGTTTTTCTTGCTTATTGGTTGTTGATTTTTTTTTTTCA .........:............x:..::.....x:..x..x.x........x.:. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 146784400 43430155 +3389 chr4 + 190214555 176962812 176962811 176962896 85 ATATAAACTTCTAAGTTTA------GCGTTCCTATGTTTCTAACTTCAAAACAAAGCCAAACAAACAAACAAAAAAATCAAACAAAACAAA chr4 - 94230402 54395854 54395853 54395937 39834466 39834465 39834549 84 ACACAGAATTCCAAGTCTACTTGAAGCATTTC---ATATCTAA----AAAGCAAAGCAAAACAAACAAACAAAAAAACCCAACAACACAAA .:.:.:.x...:....:..------..:..:.---:.x.....----...:......x...................:.x.....x..... 19M6I7M3D8M4D44M 63/78 80.8% 84/94230402 0.0% 13/78 16.7% 122566958 67647597 +3037 chr4 + 190214555 176964649 176964648 176964721 73 TTTCTTTTCTTTTCTTTTCTTTTCTTTCCTTCCCTTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTTTCTTTC chr4 - 94230402 20485340 20485339 20485412 73744991 73744990 73745063 73 TTTCTATTCTTTTGTTTTTATTTCTCTCTCTCCATCTACAATCCATCTTCCCTGTTTTGTTTTTTTTTTTCTC .....x.......x....:x.....:..::...x.:.x.xx:.:x:.....:.x:...x...:.....:.:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 156479309 33735246 +3230 chr4 + 190214555 176994641 176994640 176994745 105 CAATTCTGGAATTTCCACCTCTTTTCTTTTCTTTCGTTCTCCTCCCCTCCCCTCCCCTCCCTCTTCCCCTTCCCCCTCC----------CCTCCCCTCACTCCCCACCTTTCTTT chr4 - 94230402 93339657 93339656 93339769 890634 890633 890746 113 CACCTCTGG--TTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTT ..x:.....--....:x...x:x:...:..:.:..xx..:x..:.:::.::..x.............:..x.......:----------..:.xx.:.x.......x.x.:.:.. 9M2D68M10I26M 69/103 67.0% 113/94230402 0.0% 12/103 11.7% 83654984 NA +4255 chr4 + 190214555 176994726 176994725 176994903 178 CTCACTCCCCACCTTTCTTTCTTTCTGTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTT-TCTCTCTGTCCCTTCCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCT-------------------TTCTTTCTTCTTTTCTTTTGCAGGTATCTTGCTCTATCACCCAGG chr4 - 94230402 45185582 45185581 45185773 49044630 49044629 49044821 192 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTT---TCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC-CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTTAGGTAATT--CAATATTACCTAAG ..:.:.x.:..::..:.:.::.:::x....:xx...---...x:...x..........:.....x..:..:x:.......-.:...:.:x.:.....-......:x...xx.x::....x..x::.x.......-------------------......::.....xx.:..x:.....x:.--.xx...:...:.:. 36M3D41M1I16M1D36M19I29M2D14M 115/172 66.9% 192/94230402 0.0% 26/172 15.1% 131809144 58405411 +3733 chr4 + 190214555 176994739 176994738 176994877 139 TTTCTTTCTTTCTGTCTTTCTTTCTTTCTTTTTCT--TTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTCTCTGTCCCTTCCTCTT-TCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCT----------------TTCTTCTTTTCTTTT chr4 - 94230402 45185586 45185585 45185742 49044661 49044660 49044817 157 TTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCT-TCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTT ..x..:x:....:x....:..xx::.:xx......--...x.......:........x....::x:......-...x..::.xx.....-:......:x...xx.x::....x..x::.x.......----------------..x.........:.. 35M2I35M1D16M1I37M16I15M 97/138 70.3% 157/94230402 0.0% 20/138 14.5% 131809153 58405402 +3709 chr4 + 190214555 176994754 176994753 176994874 121 CTTTCTTTCTTTCTTTTTC----TTTCTTTCTTTCCTTTCTTTCTTTTTCTTTCTTTCTCTCTGTCCCTTCCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTTCT chr4 - 94230402 43081900 43081899 43082024 51148379 51148378 51148503 125 CTCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..::...:...:x.x:...----.x::x.:.:.:.:....:..:.......:..x::...:x...:..x.:::xx....xxx:....x.:...:...........:...x.xx:.::.::..... 19M4I102M 75/121 62.0% 125/94230402 0.0% 4/121 3.3% 133912854 56301701 +3139 chr4 + 190214555 177001935 177001934 177002027 93 CTCTTGTCATGATTGCAGAAGGTGATGCTTGCTTTCCAG----AAAGTCAATTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGT chr4 - 94230402 10781553 10781552 10781648 83448755 83448754 83448850 96 CTTCTGTAATG-TTTCAGATAAATTTATTTGCTTTATAATAGTAAAGTCAACTTCTTCTCTTTCTCTCTCTCTCTACATGTTTGTTCCTGTGTCTAT ..::...x...-..x....x::xxx.::.......x:.:----........:...:.....:.............x:x.x.:.x.::......x.:. 11M1D27M4I54M 64/92 69.6% 96/94230402 0.0% 5/92 5.4% 166220382 23994173 +3022 chr4 + 190214555 177014583 177014582 177014632 50 AAGCTGGTAAAGGGTTGGTGCTCTATTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 66733436 66733435 66733485 27496918 27496917 27496967 50 AAGCTGATAGAGAGTTTGAGATCTGTTCCTTTTTTCTTTTTTCTTTTTTT ......:..:..:...x.x.x...:..::......:......:....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 110281147 79933408 +3359 chr4 + 190214555 177023396 177023395 177023557 162 AGAGAGAGAGAGAGAAAGGAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAA chr4 - 94230402 21758900 21758899 21759061 72471342 72471341 72471503 162 AGAAAGGGAGGGAGCAAGGGAAGAGAGGGGATTTTAATGATAAGTATGTAAATAAGCATAAAAATATGTAATGATAAAAAGATGCAGCCAAGAAAAAAAAGAAAAGAAAAAGGAGGAAGACAAACAAGAAACCCAGAAGAAAATCTGTAAGAGAAAAAATAA ...:..:...:...x....:....:..::::xxxx.:x:.x..:x.x:x...x.::x.x...:.x.x:x..x..x.:.....x:x.:xx..::...:.......::..:..:..:::.:.x.:.x.::..:xxx.....:...xxx.x:..:..::...x.. 162M 90/162 55.6% 162/94230402 0.0% 0/162 0.0% 155264496 34950059 +3117 chr4 + 190214555 177023408 177023407 177023502 95 AGAAAGGAAAGAAAGAAAGAGAGAGAAA-GAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 10903375 10903374 10903469 83326934 83326933 83327028 95 AGAAAGGAGAAAGA-AAAGACAGAAAAATGTAAGAACAGAGTTGAATGAAAGAGAAAGAAAGGGGGCTAGAAAGATAAAGATGGTGAATAAAGGAA ........:.:.:.-.....x...:...-.x.....x::.:xx...x......:.:......:::.xx.......x.:.:.x::x...x:..:... 14M1D13M1I67M 64/94 68.1% 95/94230402 0.0% 2/94 2.1% 166120033 24094522 +3057 chr4 + 190214555 177023413 177023412 177023465 53 GGAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGA chr4 - 94230402 9237708 9237707 9237760 84992643 84992642 84992695 53 GGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA ...:......:x..x.:...:.....:....:....::...:...:.::.... 53M 39/53 73.6% 53/94230402 0.0% 0/53 0.0% 167785705 22428850 +3640 chr4 + 190214555 177023428 177023427 177023550 123 GAGAGAAAGAAAGAAA-GAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAG chr4 - 94230402 91538039 91538038 91538162 2692241 2692240 2692364 124 GAGAGCAAGAAGGAAACGATGGAGAAAGAAACAAAGAAAAAAATGCACTGTAAGCAGAAAATATAGAAAGAAATGGGGACTAATCAGAAAGCAATTAATGGAGGAAGAGGAAGGAGGCACAGAG .....x.....:....-..x:..........x.....:...:.x:x.xx.x...x.::...x.x.........x:::..xx:.xx::...:x..xx..x.:.:::.::.:.......x.x:... 16M1I107M 79/123 64.2% 124/94230402 0.0% 1/123 0.8% 85485389 NA +3088 chr4 + 190214555 177023431 177023430 177023509 79 AGAAAGA--AAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 70253822 70253821 70253902 23976501 23976500 23976581 81 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAAAAAAGAA .......--.:....:.....:...........:x.:.x..:x:.......:x.x::.x....x:.:x...x...:..::. 7M2I72M 55/79 69.6% 81/94230402 0.0% 2/79 2.5% 106769609 83444946 +3017 chr4 + 190214555 177023444 177023443 177023497 54 GAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 9237707 9237706 9237760 84992643 84992642 84992696 54 GGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .::........:x..x::...:.....:....:....:..:...:....::... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 167785737 22428818 +3124 chr4 + 190214555 177023458 177023457 177023536 79 GAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAGGA chr4 - 94230402 472365 472364 472443 93757960 93757959 93758038 79 GAAAGAGAAGAAATTGCAAAAGGAGGAAGACAGAGGAATAAAGAAACGAAAGATGAAAAAGACAGCAAGGGAAGATGAA .........::..xx:x.:..:..:::.:.x.:..:..x.......x:..::.x........x..x...::....x.:. 79M 52/79 65.8% 79/94230402 0.0% 0/79 0.0% 176551093 13663462 +3757 chr4 + 190214555 177023509 177023508 177023617 109 AAAGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAG----AGAGAAAGAAAGAA--AGAAAGAGAAAGAAAGAAAGAGAGAAAGAAGGGATGGAGGG chr4 - 94230402 30533164 30533163 30533278 63697125 63697124 63697239 115 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAG ...x......:.............:..:.::..::..xx.x.:...::x::.:.----...x.....xx...--....::.x:.:....:.......:..x:xx..:.x....:. 54M4I14M2I41M 74/109 67.9% 115/94230402 0.0% 6/109 5.5% 146490345 43724210 +3007 chr4 + 190214555 177023511 177023510 177023573 63 AGAAAAAGAAAGAAAGAAAAGAAGGAAAGGAGGGAGGGAGGAAAGAAGGAAGAGAGAAAGAAA chr4 - 94230402 31550166 31550165 31550228 62680175 62680174 62680237 63 AGAAAAGGAACGAGAGAAAAGTTGGCAAAGGTGCAAAGAGAAAGGAAGCAATAGAGAAAGTAA ......:...x..:.......xx..x..:.:x.x.::...:..:....x..x........x.. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 145473345 44741210 +3080 chr4 + 190214555 177023527 177023526 177023672 146 AAAAGAAGGAAAGGAGGGAGGGAGGAA---------------AGAAGGAAGAGAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAGAAAGAAGGGATGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAGAAAGAAAGAAAGA chr4 - 94230402 22272878 22272877 22273038 71957365 71957364 71957525 161 AAGAACAGGTAAGGAAGTGGGAAAAAGTACTGATCCTACAAGAGAAAGAGGAGAGAGAAAAAAAAGAAAATCTGGAATAAGTCAAGGAACTGTTAAGACTAGAAGGAGTAATGAATTAAGAAGAAGGAGGGGACAAACACAGAAAGGGAAAAAGACAAAGA ..:.:x...x.....:.x:..:.::.:---------------....:..:......:.:...:..::...xxx::.:x...xx.::..:xx:xx.:.:x.:..:....x:.x.:.xx:.::::.:.:...:::x...x.x......:....:.:.x..... 27M15I119M 83/146 56.8% 161/94230402 0.0% 15/146 10.3% 154750649 35463906 +3501 chr4 + 190214555 177023679 177023678 177023792 114 GAGAAAGAAAGAAGGGAGGGAGGGAGGGAAGG--------AAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA chr4 - 94230402 7656641 7656640 7656762 86573641 86573640 86573762 122 GAGAAACGAAGAAGGCAGGGGGAGAGAGAAAGCTTCCATTGGGGAAAAGAGAAGGGAAGGGATGTAAAATACCACACCAAAGAGAGAAAAACAAATAGAGGTGAAAAAATGGAAAAGCAGAA ......x:.......x....:.:...:...:.--------::....:::..:.:......:.x.x..:.x.xx.x:xx.:.:...:.:...x...x.:..:x::...:.x:....::x.... 32M8I82M 72/114 63.2% 122/94230402 0.0% 8/114 7.0% 169367038 20847517 +3091 chr4 + 190214555 177023745 177023744 177023824 80 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGA chr4 - 94230402 36858294 36858293 36858373 57372030 57372029 57372109 80 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAA .....x.:xx..x.....x...::...:.........:.x..x.:xx..:.:.:........:x...::x:..::.:.:. 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 140165451 50049104 +3169 chr4 + 190214555 177023753 177023752 177023833 81 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAA chr4 - 94230402 36858294 36858293 36858374 57372029 57372028 57372109 81 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAA .....x.:xx..x.....x...::...:.........:.x..x..xx..:.:.:........:x:..::x:..::.:.:.. 81M 53/81 65.4% 81/94230402 0.0% 0/81 0.0% 140165459 50049096 +3179 chr4 + 190214555 177036691 177036690 177036732 42 TGTGTGTGTGTGTGTGAGAGAGAGACAGAGAGAGAGAAGTTT chr4 - 94230402 18982317 18982316 18982358 75248045 75248044 75248086 42 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGATT .........................x........::.:.x.. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 158054374 32160181 +3114 chr4 + 190214555 177157569 177157568 177157632 64 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACACTCTGTAAACAACAGCAGAACACAC chr4 - 94230402 77866074 77866073 77866137 16364266 16364265 16364329 64 AAAAAAAAAACAAACAAAAAACAACAAAAAACACAAACACCCCAGAGACAACAAAAGACCAAAC ..........x...x......x..x......x.x:.....:.::x.:......:x...x..x.. 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 99291495 90923060 +3186 chr4 + 190214555 177159228 177159227 177159370 143 AAGAAAGATAAAAAATCCATGATTTAAGCTTACTTCTAAAGAAGATTGAAAAAATGGCAAGTTAAGCTCAAAGAATATTTACAAAAGAAAATATAAAAAATAATAAAAGAATGAAATAGAAGAAATACATGAGAGATAAAATA chr4 - 94230402 31039273 31039272 31039415 63190988 63190987 63191130 143 AGAACAGCTTAAGAAGCAGTGAAACAATTTCACATCAAAAGAATTAAAGGAAGAAGAAATGTTAAGGACAAAAAATATTTACAAGAGAGCAACTGCAATACACAGACAGAATAAAAATGCAGAAATAGAACAGGAGTTGAATA .::.x..x.x..:..x.x:...xx:..x:.:..x..x......xxxx:::..:.x.:x.x......xx....:...........:...:x.xx.:x..x.:.xx:.x.....:...xx.x.......x.xx..:::.x:.... 143M 86/143 60.1% 143/94230402 0.0% 0/143 0.0% 146119955 44094600 +4289 chr4 + 190214555 177172975 177172974 177173057 83 CTGCAGCCTCAAACTTCTGGGCTCGAGTGATACTCTCGTCTCAGCCTCCTGAGTAGCTGGGACTACATGTGCACACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.....:x..:........:..:....x.x.x.xx.x........::::.........:......:...--.......:.. 71M2D10M 62/81 76.5% 81/94230402 0.0% 2/81 2.5% 158975849 31238706 +11620 chr4 + 190214555 177181434 177181433 177181633 200 GGATGTGAGGGCGATTTGGCTGTGACATCTGTTACCCCACTGATCGCCAGGGTTGGTTCAGCTGATCTG----------------------------------GCTCCATGGGTGTCCCTCCTGAAGCT-CACACTCGCCTGAAGAGGACCAACATCCCCAGTAGAGGAGG-ACCAGTCTTCAGGCAAGGGTATATGAGTAGCCGAGCTTCCCTGCTAGAACCTCCAAACAAGCTC chr4 - 94230402 69279862 69279861 69280096 24950307 24950306 24950541 235 GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCACCAGGGTTGATTTGGCTGATCTGGCTGGCTAGGTGGGTGTCTCCTTCCTCTCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCACGCTTGGTCGAAGAGGACGACCTTCCCCGATAGAGACGGTACCGTTCATCAGTCAAGGGTATACG-GTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTC ...............:......:.........:......:.....:.........:..::.........----------------------------------........x.:........:......-...:..:.x::.........x.x.x.....::.....:x..-...:x..x....x..........:.-.....:.x...:.......................... 69M34I26M1I41M1I25M1D38M 168/199 84.4% 235/94230402 0.0% 37/199 18.6% 107901572 82312983 +3356 chr4 + 190214555 177184841 177184840 177184938 98 AAGGGAAGGGAGGGAAGGGAGGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 86597950 86597949 86598047 7632356 7632355 7632453 98 AAAGAAAGGCAGGAAAAGGCAGAAGGAAAAAAAGCAGAGCAATTAATAAAAGGAATGAGACAGTAGGGATGAAGGGAAGGACATGAAAGGGATATAAA ..:.:....x...:..:..x:...:.....:..:x.:..x..xx..x:....:..x....x..x.:.:.x...:.:...:.x:x:.:.::..x.x... 98M 62/98 63.3% 98/94230402 0.0% 0/98 0.0% 90586891 NA +3504 chr4 + 190214555 177184881 177184880 177185026 146 AAAGAAAGAAAGAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA----AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAA-AGAAAGAAAGA-----AAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 29503820 29503819 29503975 64726428 64726427 64726583 156 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAA .....::...:..............:x:.::..:....:...:.----.x:....:....:.:.x:..:x.x:..x..x..-.::x......:-----....xx.x..::..x.:..x..::..xx.::...xxx...:x:..:..x::.:.::.. 44M4I33M1I11M5I58M 91/146 62.3% 156/94230402 0.0% 10/146 6.8% 147681061 42533494 +3693 chr4 + 190214555 177184894 177184893 177185041 148 AAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAG--AAAGAGAAAGAAAGAA--AGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG--------------------AAAGAAAGAAAGAAAGAAAGGAAGTT chr4 - 94230402 30533164 30533163 30533332 63697071 63697070 63697239 169 AAATAAAAAGGAAGAAAGAAAAGAGG--GGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAA-ACACCGGAAAGGAGAGGAATAAAGTCTGTGGAGTACTCACATTTAAATATAATAAGAAAGCATGGAAATT ...x.:....:..........::.:.--:..:.......xx.x:.:....x:..:.--x....x.....xx...--....:..x:.:......:.:.....-.x.xx:::..:..:..:..x....--------------------...x.x.:x.......x.x....:.. 26M2D28M2I16M2I25M1D24M20I26M 102/145 70.3% 169/94230402 0.0% 27/145 18.6% 146651730 43562825 +3192 chr4 + 190214555 177184897 177184896 177184983 87 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAG chr4 - 94230402 36858293 36858292 36858377 57372026 57372025 57372110 85 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAG--GGACAAGAAAAGAAAAAG ......x.:xx..x.....x...::...:.........:.x..x.:xx:..:.:.::..:.:..x..--:..x..::.......... 67M2D18M 58/85 68.2% 85/94230402 0.0% 2/85 2.4% 140326604 49887951 +3377 chr4 + 190214555 177184919 177184918 177185012 94 GAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x........:x:::..:.x:xx..x....xx..x.::...x.x.:....x..x..:..:..--..:........ 83M2I11M 65/94 69.1% 96/94230402 0.0% 2/94 2.1% 115850218 74364337 +3133 chr4 + 190214555 177184923 177184922 177185016 94 GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAA--AGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334796 32895607 32895606 32895702 96 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGA ......:.....x......x.:x.:......:x:.:..:.x:xx..x.:.:xx..x.:..:.x.x.:....x..x..:..:..--..:........ 83M2I11M 63/94 67.0% 96/94230402 0.0% 2/94 2.1% 115850222 74364333 +3948 chr4 + 190214555 177184948 177184947 177185068 121 AGAAAGAGAAAGAAAGAAAGAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGTTTCCCTTGCCTGTGTTGTCTTCTTTTTT chr4 - 94230402 70253822 70253821 70253932 23976471 23976470 23976581 111 AGAAAGATTAGGAAAAAAAGAAAAAGAAAGAAAATGGATGAGTAAAAGAAAACATAGATGAAATGAGCAAATAA----------AAAAGAACttttttttttttttttttttttttttttt .......xx.:....:..................x.:.x..:x:.......:x.x::.x....x:.:x...x..----------...:...x...:::..x::.x.x..x.:..:...... 74M10D37M 77/111 69.4% 111/94230402 0.0% 10/111 9.0% 106931126 83283429 +12023 chr4 + 190214555 177245908 177245907 177246165 258 GCTAGTGCCAACGTTTCGTATTTATAAAATCGCATGCACTCTGTTGCCATTTAGCGTAGTGAATACCCATTTGTAAACAAAGTGGTGATACATTATGATAGCCAAAGGGCAAAGCTTTACCTGAACAGAGATTCATCATCTTTTAATGCAGCACAGCTTGCTACTTGCAATATCATCAAGCACTCTGAAAGGTTC-TTGTCAGAGATTGATGACCTAAACAGTCACTGAAACTTAATAACAGCGTTAACAACTGCAGGT chr4 - 94230402 50532723 50532722 50532966 43697437 43697436 43697680 244 GCTAATGCC----TTTCCCCTTCAAAAATGTCTACGCA------TGCCATGTCTCATGATGAATACCCATTTGTAAACAAAGTAGTGATTCATTATTATAGCTGAAGGGCATCGTTTTACCTGGATGTAAATTCATCATTTTTTAATGCCTCACAGCTTGATGCTTGAAATCTCATCAAGCACTTTGAAAGCTTTGTTGACATAGATTGATGGTCCAAACAATT-----AACTTAATAATGGCATCAACAACTAGAGGT ....:....----....x:x..:.x...xx:x:.:...------......x.xx.:.::........................:.....x......x.....::.......xx.:........:.::x.:.........:.........xx.........x.:....x...x............:......x..:-...x..x.........::.:.....:.:-----..........::..:.:.......:x.... 9M4D25M6D151M1I28M5D30M 189/243 77.8% 244/94230402 0.0% 16/243 6.6% 126713185 63501370 +15240 chr4 + 190214555 177246782 177246781 177247498 717 AGTTAAAGACACAACTTCTGCAATGCTCCAAAAGCAACTGAACTGTAAACAC------------CATGGATGATTCACAATCAGTTCATAACTTACTATTTTTATCCTTTTTCAGAGCTCTGTGCATGTACATAAAATTCAAGAGCACAACTGAATAAAATACAAATCACTGAGTGACTATTTAAAATT--TAAATTTT-------GTTGTGAGCATTATCAACAAAGGCGGGCCATTAAAAAGGTTATTTCT--TTACCGGTGAATTAATGATACAAGGAC--------AACCAGTGTAAACTATTCTGCAGACAGGCCAATAATGAAAACATAGCTAAAGCAGTAAAGCTTGCCAACTACTGATGAGACTCAGGAGAAATTTCTTAACAGATGTTTCCCTGAGCAAATATATACTTTGCCTACTCTGATTATGATGGCCTTGAGAATTCGTGATTTGATTCAACACTCAGCTACTCTTCAGCAGCCTCATAAAAATATGATTCGTACAAAGGATATATTCTATATTTTCCCTTCCTAAGAACCAATATCTAACATATTTATAGTTCTCAGTCCCATATGGTGAAGCAGTGGTCCAACAGCACTGTTTATAACAGTATAATTAAGGTTGTGTCAGCATTTTA-TTATGAAAGGAAGGAGGCGAAGCCTTTTTGGATTTTTTTCTGTTTTCATTTTATAAGCTTCCCTTAGTTGAGTGCCCACTGACTGCAATAATCTGCTTTGACCTT chr4 - 94230402 50534869 50534868 50535565 43694838 43694837 43695534 697 AGTAAAGGACTTGGCTTCTTCTGCATACACAAAATAACTAAGCCTTAAACTTAATTTGGAGGTACATGTGTAGCTCACAGACTATGTATA---TATTATTTTCATGCT----CAATGATTTATATTAGCACAGAAA--CCAAAATTTC--CTGTATAGGATATA-------------CTATATAAAAGCACTAAGTTTTCTTACATGTTGTTTCTACTTCTAACAAGAAGCTGCAATTTAAATACTTGTTCTTAGTT-----TGCACTGAGAATAGAAAAAAGTGCTATAAAACATATTATGCCATTTTATAGACACAGCAATAATGAAAACATTACTAAGGCAATGAAATTTGCCAACCACTGATGAGACTCAGGAGAAATTCTTTAACAGATGTTTCCTACATCAAAATGATACTTTGCTTGCCCAGATTGCAATGATCATGAGAATTCATTATTTGATTCAATGATCAACACCTCTTCAGTAGTCTTATAAAAAAGAAATTCTCGCAATAGA------------TTTTCCTTCCACACAGCAGCTGGTAAATACATTTATGGCCCTGAGTCCCTTATGGCAAAGCTGTATTACAGCATTCTTGTGT-TCATGACATAATTAGGGTTGCATCAGCACATCAGTCATACTCTGACAAATGC-AAATCTTATTTTATTTGTCTC---------TTTATAAGCTACTATCTTTGCAGCAAGCGGTGACCACTGTAATATAAGTTGACCTT ...x..:...x:::.....x.x::::x.xx...::....:.:.:x.....x:------------....x:.:::.....:x.x:.x:...---..:......:..x..----..:x.x.:.:.::xx.:...x...--:...:.x:x.--...x...::...:.-------------....x.....x:--...:....-------.....xxx:.:.x::.....:::xxx..x...x...x:x..:..::.--..-----..x.:.:.x:...x..::.x--------..x..xxx..x:.:...:.::.....x:x...............x:....:...:.:..::........:.......................::...............:xx.x....xxx.........:.:.:.x....:::...::.x.........:.x...........::x...:.xx........:..:..:.......x:x:....x::...x:..------------...:......xx.x.:.x:x.:x:x..:.:......:.::..x......x.....::....x..:x.x..:..x:x:...x.-.x.::::.......:.....::......:x.:.-.:..:xxxx..x::.x..-..::...x..xx....x.:..---------..........x.:x.:xx.xx..::xx.:x....::.x:....x.:xx........ 52M12I26M3D15M4D24M2D10M2D14M13D12M2I8M7I47M2I2M5D20M8I225M12D82M1D33M1I18M1D21M9D56M 432/665 65.0% 697/94230402 0.0% 84/665 12.6% 126711913 63502642 +3089 chr4 + 190214555 177247854 177247853 177247899 46 AAAAAAAAAAAAAAAGCAAAGCAAAACAAAAAAACAGGAAATTGTT chr4 - 94230402 79443303 79443302 79443348 14787055 14787054 14787100 46 AAAAAAAAAAAAAAAGCAAAACAGAACAAAAACCCAAAAAACTATT ....................:..:........xx..::...:.:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 97804551 92410004 +3034 chr4 + 190214555 177247939 177247938 177247999 61 ATTATTATATTCTGCAGATTTCTTTCTTTCTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15704855 15704854 15704915 78525488 78525487 78525548 61 ATTGATATATTTAGGAGAGTTTCTCCTTTCTTTCTTCCTTTTATTTTTTTTGCTGTTTCCT ...:x......:x.x...x..::.:............:....x........x:.x...::. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 161543084 28671471 +7053 chr4 + 190214555 177250029 177250028 177250301 273 CCTCTTACCAAGAGATAATTCAC-ATGTGCCATCCTCCCTCACCAATTGTAACATTCTCAGAGGTGGAAAGCTGCCAGAGTCATTAACCGGCTCTGCATTATGCCATTTCTCTTGCTGTCTAACCTGTCACCTCCATGCCTTCTGCAGTCTTTCCTCTCCTT-CAGACTCGCTCTCAGACATACGTATCAGTAACTGGTGCCTCGCCTTCCTCCCGCCGCCTAACAGGCTGCTATTCTGCCATCGCCCTCCTGGGAGCGCTGCTGGACCGTGAGC chr4 - 94230402 50536751 50536750 50537004 43693399 43693398 43693652 254 CCTCTTGC----ACATAAATCATGAAGTGCCACCTTGCCTTTGCAACCCTTACCTTCTCAACTGCTAAAAATTGCTGGCATCATTAACTCACTTCATATTATGCTATTTCTCTTTCTGTCCAACCTGTCACCTCCTCATTTGCTCCTGCATCCCATGGTTTGACAGATGCACTTTTAGGAATGCTTCTC-------TATTTCTTGCCTTATTC----------AGATTCTGCTATGATGCCAGCTTCCTCCTGAGAGCGCTGCTGCATCATAAGC ......:.----.x....x...:-.x......:.:.x...:xx...::x.x..x......:xx.:x:...::...::.x:........:x:..::::.......:.........x.....:..............x::::.x..x.x.:x.::.x.xx::.x-....:x.:..:.:..:x..:.x.x..-------x:.x:..:.....x:..----------.x.xx.......xx.....x.x:.......:...........x.:.:.:... 8M4D11M1I138M1I26M7D17M10D52M 166/252 65.9% 254/94230402 0.0% 23/252 9.1% 126713278 63501277 +3803 chr4 + 190214555 177252840 177252839 177252924 85 GTCTTTTCCTACTGTGTGCACTTGGGCAAATTACTAAACCTTCCTCTGTTTCAGTTTCCCCATCTATAAAATGGGAATTATAACA chr4 - 94230402 11947204 11947203 11947285 82283118 82283117 82283199 82 GTCCTCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAATG---ATTATAATA ...:.:x.:x........xx...:..:x.:.:...x..:..x...x...::............x...:.....---.......:. 73M3D9M 61/82 74.4% 82/94230402 0.0% 3/82 3.7% 165305636 24908919 +3120 chr4 + 190214555 177261197 177261196 177261262 66 AGATCCATGATTTTGCTAATATATATATATATATATGGATATACATATATGTATACGTATACATAT chr4 - 94230402 81378278 81378277 81378343 12852060 12852059 12852125 66 AGGGCCATGGTATCCCCAATAAATATATATGTGTGTGAGTGTGCATACATATATGCGTTTACAGAT ..:x.....:.x.:x.:....x........:.:.:..::.:.:....:..:...:...x....x.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 95882919 NA +3419 chr4 + 190214555 177261215 177261214 177261370 156 ATATAT----ATATATATATATGGATATACATATATGTATACGTATACATATATACATATGTATATCCATATATATACATATATAATGTTAGCTGGAAGCTGAAGGATATGTGTGAGAATGGGTTCTAACAAGGATAGAC----AAGGGAAAAAGAAATATAGA chr4 - 94230402 48167041 48167040 48167190 46063213 46063212 46063362 150 ATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATG---GTAAATGTGCCAGGAAAA----------ATACTGAAAACTAATTG-GAAAACGAGTAGTAACAAATGCAGACTTTTAAGAGATCAAGGAATGTAAA ......----......:.....:..:......:x.::.:.:.x:.....:..:....:......:---:..x..:.:.xx:x.x..----------.x:.....::x..xx..-..:..:.:..xx......:x::....----...:..xx...:...:..:. 6M4I55M3D18M10D17M1D26M4I20M 96/142 67.6% 150/94230402 0.0% 22/142 15.5% 129094174 61120381 +8950 chr4 + 190214555 177264433 177264432 177265188 756 TGTGGAAGGCTGCAAATTCTGTTTCATTTTTGGGCCAGGGAATACGTGAGGAGCTATGAATCATGTTAAAGATATAAAGGGATTACTGAT----AAGGCCTAA-ATTTTTTTCAACCTAACAGCTGTGCAGAAAAATTTTCATAATGC---TTGCATTTAATTACATAAAGAGTGGTACAGTCTCTTTCACTTTATCTCAGTAATGAAGGCTTGATTCTGA-----------AGATAATCC--------AGGGTCTTTCCCT--------GTCAAGGCCAGCATGTGGGTAACAGTGAATTCAATTCCCA-------------------CTCTTCACTATCCTTAGACGATAAAACAAGAATAATTTTTCA-CATGCATTATAAAGA------TGAAAAATAGTACCG-----TAGGGCGTATTTTCTTTAATGTACTCTAAAAATAT-AGAGAGGTAGCATGATAGACAGATGTATAAAAGAAAAAAAAATTAGCCTCTGAGCCATTTCTAGAGTTCACTGTAACACCATTCAACAAAAATTAAAGAATATGAAA---GAGTCCTTTCCTTAAAAAAAA--GAAACAGTAGTTT-------------------GTTAAATTTTCTAGTACTGAAGCTTC-------------TTTGTGTGGGATTTAGCCACAGCCTCTGATGGCTTG---------CA-----------------AGATTGCTAGTTTTATGGAAATAATTAGGAAGCCCAGCTCTGCCTTGTAAACTAGGAGTCTTGAGGTTAATTAAAGTAAAATGAATGCTGCATATATAAGAACCACCAGTAAAGCTTGACAGTCAGGTATGTAGAATTCTGTCATCTGCTGAGAATACAGACAAAGAAA chr4 - 94230402 50541717 50541716 50542553 43687850 43687849 43688686 837 TATGGAAGGCATCCAGTT-TGTTTAATTTATAGGC-----ACTGTTTGAGAATCTATGAATCGTGTCAGAGATTTAAAGGGATTACTGATAGAGAAGAGGTAACATTTCTTCCAGTACAACAGCTGTTACAAAAAATTTCCATAATAACAGTTGTGTTTAATTATATAAAGATCTGCAAAGCCTTTTTAGCTTCATATGAATAATGCAGCTGTGATTCAAAAGTTGCTAAAGAGATAATCCTCTGGCTGTTGGTTTTTTTTTTTTTTTTGGTCAAGGCCAGTTCATGAATGGCCATGATTTAAATCCCAAAGTCATTGTTTTTATTTGTTTTTCCCCTAAATTTGAACAGGAAAAAAAGAATGTTTTCCAAGCATTATTTATCACGAGTCCTTCAAGAAATGCTACCAATGCTTAAAAAATAC--------ATTTACAATAAAAATATCCAAAATACTGCATGG---------GTATGAGGGAAAGAAAAAAT------TGTAAAATATCTGG-------TCTGACATTACTGA--TAAACCCCCAGTATCTAAAATTGGTGTCTTTTACTAAAGAAGGATTGCTGTAGTAATTTTGAAGACCCAGAAAAGTCAGTGAAAATTGC-ACTTCTTAATCTTCTGCTCTTCCTGCTTCTCTCTGGAGTTGAATACTGGCTTCTGACTGCTTAATGCCTACTCATTCCTCACTTCCTGAGCAGATGACTAG-TTTGTGAAGATAATTAGAGACCCCTGCTATCC----TAAGTCTCATATCTTATGACTAATTAAAACA----GAGTGCAGTATGTACACAGGCAGCAGATAAAGGCTTGCAGCAAGGTAC-CGGCATTGCTCCATTTGTATAAGTAACAGAAGAAAAAA .:........xx.x.:..-.....x....x.:...-----.x.::x....:.x.........:...:.:....x................----...:xx...-....:..:..::x:.........xxx:........:......:x---...::........:.......x:x.:.x..:..:...x:...:..x.x.:.....x..x:x......x:.-----------.........--------xx...:...:::.--------...........:x::..::.::.x:...x..x...:..x.-------------------:.:.:.x...xx:..::..::x....x......:x...::x.-...xxx....x.x..------::.:....:x....:-----..:::x:..:--------..x...xx.........-x:.:.x::x.....:---------....:.::....:.....x.------..x:xx..x...:.-------.x.:...::.:.x.--x...x::xx..x..x.:...---.x...:...x..x..:..::.--.xx::....:...-------------------..x...x..x.-.x.x..x..x....-------------.:.x.x...::..x.::xx::..:.....:x....:---------..-----------------....x:....-...:..:.:........::.x...x...x.x.----...:::xx:x:....:x.::........::.----..:...x.:..:..:.x:::.x:.x::.....x:.x:...:x.....:-::.x...x:x:...:..:xx.::xx.....x:..:... 18M1D16M5D50M4I9M1I44M3I70M11I9M8I13M8I40M19I42M1I15M6I15M5I10M8D17M1I15M9D20M6D14M7D14M2D20M3I21M2I13M19I11M1D14M13I36M9I2M17I10M1D32M4D31M4D48M1D38M 460/707 65.1% 837/94230402 0.0% 179/707 25.3% 126722716 63491839 +3393 chr4 + 190214555 177273794 177273793 177273991 198 CTGCAGCCTCAACCTCCTGGGCTCAATAGATTCTCCCACCTCAGACTCCTGAAAAGCTGGGACTACAGGTGCACACCACTATG-------CCTGAATAATTTTAAAATATTTTGTAGAGACAGGGTCCCA--CTGTGCTGTCAAGGCAGATTTTGAACTCCTGGCCTCAAGTGATCCTCCT-GCCTCAGCTTCCCAAAGTGCTGAGAT chr4 - 94230402 18197126 18197125 18197320 76033083 76033082 76033277 195 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGTATCATCCTTTCATGACATT-ACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCC--------TTCTGCCCTCCT--CTTTCAGTCTACTTCCTCAAATCAGGTTCCCAATGTCCTCAAAT ..:.....:x..x..:.....:....xx.x...x.xx:x.....x..::::.:x......:......x...--.......:..-------.:.xx..:.:x..-.x...:...x:x:.:x....x:..:.--..x.:...:.--------..:..xx.....--.:.:x...xxx.:....-:xx....x.......x..x..x.:.. 71M2D10M7I13M1D26M2I10M8D12M2D17M1I26M 123/185 66.5% 195/94230402 0.0% 23/185 12.4% 159076668 31137887 +5123 chr4 + 190214555 177322406 177322405 177322586 181 GCTTAGAGTTTGTG-----TGTGTGTGTGCTTATGTGTGTACATGTATTTTCCACTAGGCTGCTGCAC-TGAATAATGA--TTCCAGCCAGAATGTCTTGAGCCTGTTTAATGGATATGTTTACAGTGGCGTGGAAACTTTGGGGAAGGAGCTCTTTATGTACTTTGGACCAAAAGCTTTACGGTAAGA chr4 - 94230402 50550794 50550793 50550967 43679436 43679435 43679609 174 GTTCAGCGTTTGTTCATTCTGTTTTAATCTTTTTGTGTGTGC--TCATTTTC----AGACTGTTGCAAGTGAGGAGAGAACCTCTAGTCATGATTTCCT---------TACCGGACAAGTTTTCAGGGGTGTGGAAACATTGGGAAAGGAACTTTTTATGTATTTTGATCAAAAAGCTTTGAGGTAAGA .:.:..x......x-----...x.xx:.x:..x.......:.--x:......----..:...:....x-...:x.:x..--:..:..:..x:..x..:.---------..x:...:.x....x...x..:........x.....:.....:..:........:....:x.x.........:x....... 14M5I23M2D8M4D12M1I10M2I18M9D81M 121/166 72.9% 174/94230402 0.0% 23/166 13.9% 126771612 63442943 +3023 chr4 + 190214555 177331965 177331964 177332027 63 TCTTGCATATTCATGTCACAGAGAAAGTCTCTCCATGTTCTTACCTCTCCACCATGTAGACTG chr4 - 94230402 5696419 5696418 5696481 88533922 88533921 88533984 63 TCTAGCACATCCCTATCCCAAAGCGAACCTCTCCATGCTCTTGCCTCTCAGCCCTGCTGGCTG ...x...:..:.x.:..x..:..x:.::.........:....:......x:..x..:x.:... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 171635546 18579009 +13520 chr4 + 190214555 177335965 177335964 177336349 385 ATTTGTAAGGTCTTTGTTGTTTGCATATG---------TA-ACTCTTATACCCTGATTAACATAAAGTGCTTATAGCAAAGCT-------CATTTTAAAAGACACTTTGTGAAATTATAACCAGACTTATGATTAATGTGTTTTATA--TTCCTTTCTATAGAAACTCAATGGAAAGCCAACAGAGAATAAGAATGATGAAAGAATTAGATGTATGTTCACCTGAATTTAGTTTCTTGAGAGCAGAAAGTGAAGTTAAAAAACAGAAAGGCCGGATGCTAGGTGATGTGCTAATGGATCAGAACGTATTGCCTGGAGTAGGGAACATCATCAAAAATGAAGCTCTCTTTGACAGTGGTCTCCACCCAGCTGTTAAAGTAAGTT-------TTAAGTATTTTTTTAATTATC chr4 - 94230402 50554035 50554034 50554430 43675973 43675972 43676368 396 ATTTTCATGTTTTGTGTTATCTGCAAATAATAACCTGTTACACTTTCATATATTGATTTTTTTAAA----CAAAAGTAAAGCTGCTAAATTATCTTATAAG--------TAAGATTAAAAAAAAA---AACAACAATGTTTTTGTTGGTTTTTCTCTTCCAGAAATGTAACTGAGTGTGAGCAGAGAGTGAGAATGATGGAAAGCTTGGATGTCTGCTCCCCAAAGTTTAGCTTCTTAAGAGCAGAAAGTGAGGTAAAGCAGCAGAAAACCCGGATGTTATGTGATGTGTTACTAGATCAAAGAGTATTACCTGGAGTTGGAAATATCATAAAAAATGAAGCACTATTTGACAGCGGTCTCCATCCAGCTGCTAAAGTAGGTGGATTGCATCAAGATTGTTTTTAATTATC ....x:.x.x.:.x....:.:....x..:---------..-...:.:...:x:.....xx:x....----:x.x..:......-------:..:...x...--------.:.:....x..xx.:.---.xx.x:.....x...xx.:--..:::.::.x:.....:x:..:x..:x.:x.:......:.:.........:..::x..:.....x..:..x..x:.:.....:.....:..............:..x..:x.:......:x.......:..x........:..x.:.....:.:x.....:........x..:..:.....x...........x..x........:........:.......:.......:..x-------.:...xx.x............ 29M9I2M1I25M4D13M7I11M8D16M3D19M2I234M7I21M 267/370 72.2% 396/94230402 0.0% 41/370 11.1% 126781930 63432625 +5461 chr4 + 190214555 177339765 177339764 177339963 199 TGTTTTTTCCACTTCAAGGTTTGTCAATTAACAGATGAACAGATCCATCACCTCATGAAAATGATACGTGATTTCAGCATTCTCTTTTACAGGGTAAGAGCAAAATTTTTCAACTGTGTAAAATGTAAAATGTCAGTGGTTTCCTTTTGGAGTGCACCAAAAAATGTGAAAGCTGTATATAGCCATCTAGTGGAAAGAG chr4 - 94230402 50555298 50555297 50555469 43674934 43674933 43675105 172 TACTTGTTTTATTTGCAGGTTTGCCAACTGACAGATGAGCATATACGTCACTTGGTGAAAATGACACGCGACTTTACCCTGCTTTTTTATAAGGTATGGGCAGAGATTTCTAA----GAAACCTCTAAAAC-----TTGATTCC------------------AGCATCACAGCTGTATTTGATCAGCCAGGGGAAAGAG .::..x..::.:..xx.......:...:.:........:..x..x.:....:.x:.........:...:..:..:.x.x.x..:.....:.:....x.:...:.:x...::..----.x..xx.x.....:-----.x.x....------------------.:::.x.x........x.:::..x.:..x........ 113M4D14M5D8M18D37M 118/172 68.6% 172/94230402 0.0% 27/172 15.7% 126784467 63430088 +3273 chr4 + 190214555 177345765 177345764 177345837 73 CTACAACTTCCACTTCCTAGGTTCAAATGATTCTCCTACCTCGGCCTCCCAGGTAGCTGGAATCACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA .....:.::xx.x:.:..:.......:..x...x.xx:x...:....::..:..........::...x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 159148639 31065916 +8254 chr4 + 190214555 177351370 177351369 177351552 183 TATCTTATAGCAAGCTACCGACTAGAAATACTATAATCAGTTGGACATCTAGCAGGGTGGATCATGTTATG--GACTCCGTGGCTCGGAAGTCGGAAGAGCACTGGACCTGTGTGGTGTGTACTTTAATCAATAAGCCCTCTTCTAAGGCATGTGATGCTTGCTTGACCTCAAGGCCTATTGGTA chr4 - 94230402 50561272 50561271 50561454 43668949 43668948 43669131 183 TATTTCACAGCAAACTGCCAACTAGAAATAGCCTAATTGGCTGGGCATGTGGCAGGG--GGTCATGTTCTAATGAACACATAGCTCAGAAATGTGAAGAAGAGTGGACGTGTATGCGCTGTACCCTAATAAACAAGCCTTCTGCTGAAGCTTGTGATGCCTGTTTGACTTCAAGGCCTGAAGGTA ...:.:.:.....:..:..:..........x:x....::.:...:...x.:......--.:.......x.:--..x:x.:.:....:...:.xx.....:x.x.....x...:..xxx.....::....x..:.....:...x..:.:..x........:..:.....:.........:xx.... 57M2D12M2I112M 131/181 72.4% 183/94230402 0.0% 4/181 2.2% 126790098 63424457 +7373 chr4 + 190214555 177353260 177353259 177353482 223 ATGTTATATTTATGGGAC-TATTGCAGAATTACTTCTCTCTCCTTCCAGATTCAGTGCTCAAGAGTGAAGAAAATTCTACTGTCTTTAGCC---ACTTAATGAAGTACCCGTGTAATACTTTTGGAAAACCTCATACAGAAGTCAAGATCAACAGAAAAACTGCATTTGGAACTACAACTCTTGTCTTGACTGATTTTAGCAATAAATCCAGTACTTTGGAAAGAAA chr4 - 94230402 50562383 50562382 50562595 43667808 43667807 43668020 213 ATGCTGTATTTATTTCACATTTTGCATAGTGAGTTCT---TCATTGAAGA--CAG------AGAATGTTGAAGATTCTGCAGACTTTAACATAAATCTCATTAAATACCCTTGTAATGAATTCAGAAAACCAAGCACAGAAATAAAGATCAACAGGAAAGCTGCATTTGGAAATACAACTCTTGTCCTAACAGATCTTGGTAATAAAG-CAGTA--TTGAAAGGGGA ...:.:.......xxx..-.x.....x.:.x.x....---..x..xx...--...------...:..xx...:.....:.x.x.....:.x---.::.x..x..:.....x......:xx..::.......xx::......:.x...........:...:............x.............:.:..x...:..:.:......x-.....--...:..:.::. 18M1I18M3D10M2D3M6D30M3I114M1D5M2D11M 156/209 74.6% 213/94230402 0.0% 18/209 8.6% 126790877 63423678 +3060 chr4 + 190214555 177358270 177358269 177358328 59 GAATAAGATCACACGTGGCTATGTTTTTGTTGTTGTTTTTTGTTTTTTGTTTTTTTTGA chr4 - 94230402 79158474 79158473 79158532 15071871 15071870 15071929 59 GATTAAAAGAATACAAGGTTGGGTTTTTGTTGTTGTTTTTTTTTTTTTGTTTTCAGTGA ..x...:.xx.:..:x..:.:x...................x...........:xx... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 98199796 92014759 +11815 chr4 + 190214555 177360442 177360441 177360714 273 GTGGTGTGAATGGTCCCTT-AGCACTCCTATGCTGTACTTATTTTGTAACCTGTCATTACAGTGAACTTCAAATTAATATGACAGATGGCCCTCGTACCTTAAATCCTGACAGCCCTCGCTGCAGTAAACACAACCGCCTCTGCATTCTCCGAGTTGTGGGGAAGGATGGGGAAAACAAGGGCAGGCAGTTTTATGCCTGTCCTCTACCTAGAGAAGCACAATGTGGATTTTTTGAAGTATGTGTAAGATTT----ATCTAGCTTACTAAAATGTAAT chr4 - 94230402 50565229 50565228 50565502 43664901 43664900 43665174 274 GTGTTGTTGGTAATCCCTTTAGCATT---GTGCACAAGTCATTTTGTAATCTGTCATTACAGCAAACCACAAGTTAATTTGACAGATGATATTCATACACCGAGCACAGGCCCTCCTCACTGCAGTAAACATGGTCACCTCTGCAAACTCAGAATTGTGAGGAAGGATGGAGAAAACAAGGGCAGGATGTTTTATAGCTGTCCTCTACCCCCAGAAACTCAGTGCAACTATTTTCAAGTAAGTATAAAACTTCATGGTCT-GTTTTCTAATATGTAAT ...x...x::.::......-....:.---:...xxx.x.:.........:............::...:x...:.....x.........::x:..:...x:::.::x.x.:.xx:....:............::::.:........xx...x..:.....:..........:...............xx.......:x............:xx....:.x..:..:::x.x....x.....x..:...:.:..----:...-.:..x....x....... 19M1I6M3D223M4I4M1D17M 196/269 72.9% 274/94230402 0.0% 9/269 3.3% 126795213 63419342 +9996 chr4 + 190214555 177362272 177362271 177362470 199 ACCTTTTTTTCCTGCAGTGGGCAGATTTGTCCTTCCCATTCTGCAACCATGGCAAGCGTTCCACCATGAAAACAGTATTGAAGATTGGACCTAACAATGGAAAGAATTTTTTTGTGTGTCCTCTTGGGAAGGAAAAACAATGCAATTTTTTCCAGTGGGCAGAAAATGGGCCAGGAATAAAAATTATTCCTGGATGCTA chr4 - 94230402 50566236 50566235 50566434 43663969 43663968 43664167 199 ACTGTTTCTTTTGACAGTGGGCTGACTTGAGTTTTCCATTTTGTCACCATGGCAAGCGATGCGTTATGAAGATGGTACTGAAGCTTGGTCCCAATAATGGAAGGAACTTTTTTGTGTGCCCATTACAAAAGGAAAAACAGTGTGGCTTTTTCCAATGGGCAGAAAATAAGCCAGTTACACCATCTATTCCTTGATCTTA ..:x...:..::x:........x..:...xx:..:.....:..:x.............x.x.:::.....:.::...:.....x....x..:..:.......:...:...........:..x:.xx::...........:..::::........:............::.....xx.:.xx.x:.......x...x:.. 199M 143/199 71.9% 199/94230402 0.0% 0/199 0.0% 126796036 63418519 +3184 chr4 + 190214555 177374623 177374622 177374716 94 TTTTCTCTTCCTTTCTGTTTTTCCCTCCCTCCTTTCCTTTCTTCCCCTACTTCCTTTCTTCCTTCTTTTTTATCTCTTTTGTTGATGCTGATTG chr4 - 94230402 79422460 79422459 79422551 14807852 14807851 14807943 92 TTTTTCCCTCCTTTCCATTTTTCCTTCCCAACATTCTTGTCTTCCAGCTTTTTCCACCTTCATTCTAGTT--TCTCCTTTGCCATTGTTATTTG ....::.:.......::.......:....xx.x...:.x......xx:x:..:.:x:....x....xx..--....:....:::x..:.:x... 70M2D22M 61/92 66.3% 92/94230402 0.0% 2/92 2.2% 97952163 92262392 +3230 chr4 + 190214555 177381660 177381659 177381760 101 TTTATATATCCTTTTTCTACATTTGGGTTTTTTTTTTTTTTTTTTTTTGGCATTTTCTT-------TTGCTT----TAAGG-----GTACTCTTTATATATTAGCTTAATTTGCCCA chr4 - 94230402 55475784 55475783 55475900 38754503 38754502 38754619 117 TTTTTATATCATTTTGCTATTTAACAGTTTTTTTTGTTTTTTTTTTATGGCATTCTCTTACCTATCTTACTTTTTGTAAGGTGAACATACTCTTTTTTTTTTTTTTCAGTTTCTTCA ...x......x....x...:x.xxx:.........x..........x.......:....-------..:...----.....-----:........x.x.x..xx:.:.:...x::.. 59M7I6M4I5M5I31M 76/101 75.2% 117/94230402 0.0% 16/101 15.8% 121905876 68308679 +3334 chr4 + 190214555 177382621 177382620 177382679 59 CACTTTCAATTGTCTATATCCTATGTCACTAAAGAAACAGAAGCAATCAGAAGAGAACT chr4 - 94230402 79535579 79535578 79535637 14694766 14694765 14694824 59 CACTTCAAACTGTTTGTATTCTATATAACCTATGAAATAGGAGCAATCAGAAGACAACT .....:x..:...:.:...:....:.x..:x.x....:..:.............x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 97847042 92367513 +3512 chr4 + 190214555 177401594 177401593 177401672 79 TGTGATATTTTTCTAGTATTATTTCTAACACAAGCCATCCTTATATTCACCCTCCTCCCTCTCCTGTTTCTACAATTCT chr4 - 94230402 89977873 89977872 89977950 4252453 4252452 4252530 78 TGTGGTGTTTCTCT-GTATGGTTTCTAACACACACAATCTTTCTTTTTCTCTTTCTCCCTCTTCCTTTTCTCCTATTCT ....:.:...:...-....x:...........x:.x...:..x.x..:x:.:.:........:.:x.....x.x..... 14M1D64M 57/78 73.1% 78/94230402 0.0% 1/78 1.3% 87423721 NA +3335 chr4 + 190214555 177422792 177422791 177422854 63 TATATATACATAAATATGTGTGTGTGTGTGTATATACATACATACACATATATATATATATGT chr4 - 94230402 32959572 32959571 32959634 61270769 61270768 61270831 63 TACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGT ..:x.......:.:.:.x.....::...:...........:.....x......x:..:xx... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 144463220 45751335 +3273 chr4 + 190214555 177422793 177422792 177422846 54 ATATATACATAAATATGTGTGTGTGTGTGTATATACATACATACACATATATAT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT .:..x.:..:.:x...:..:.....::.x............:............ 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 120771963 69442592 +6899 chr4 + 190214555 177431529 177431528 177431821 293 TAAAAATAGATAATACAATTTCAGATATAGAAAGTGCCAATTCAACATAAATTTATTTTTGTGTTTATT-------TTACAAAAAGACTTTAGAACACATGAGGAACACTAGATGATGAGAGTGAGCAGCCTTTTCAGCCTTTGTTTCTTTCTTCTTTAAATACAGATGTTGACA-GTAAAGATGGATTAGATGCAGTCCACTTTTTCCTCAGTTGGCTGATTTTTTTCGGAATTATAAACCATGAAACTAAACTGAGTAAATGTTGAAAGTTTATTGCAAGCAGCACCTGGGGCCAAAAA chr4 - 94230402 50577662 50577661 50577943 43652460 43652459 43652741 282 TGAAAACAGAATATAC---------TAAAAACAGTGAAGCATCCACATCAACATATCTTTATACTTGTTCACGTGATTATAAAACAAC----AAAAATCAAAGAAATATTTTA----AAAAGTGAT--ACTTTGGGAATCTTAGCACTTTCCTCCTCTAAGTTTAGATGTTAATAAGGTAAAAGAAATTAAATGCAATCTACTACTTGCTCAACCGGCTGACTTTGCAAAGGGCTAAAAACCATGAAGTGAAACTGAGTGAATCCTGGAATTTTATTACATGCAGCACCTGGGAAAGAAAA .:....:...xx....---------..x.:.x....xx:xx..x....x..:x...:...:.::..:..-------...:....x:..----:..x.:xx:..:..:.:.xx.----:.:.....x--:.:..xxx.::...x.:x::..:..:..:...:.x:.......:.:.-.xx..:.x::....:.....:..:...x:..x....:::......:...x:xx:.:::..x..........::x.........:...x:..:..x......:..x............:xx:.... 16M9D44M7I12M4D21M4D9M2D47M1I125M 177/274 64.6% 282/94230402 0.0% 27/274 9.9% 126853867 63360688 +13006 chr4 + 190214555 177432335 177432334 177433359 1025 CACCTGTAAATTCATCCACAATTATATAATTATCATTTTTTTCATTCTGTTAAATCCAACTTTGAGCTTTCTAATAAGGTTTATTTCTTAAGAGGGAATCAATAGAACTGCCT--TATTTGATACA---TAAAGCTTTTCCCCTTCATAATTT------------TTATTGACTTTTGTGTCTTAGT--GCTTAAAAAAGAATAAAGCATTCCTCAAACA--AGTTTTTCAAATATAGAACTGTGGGAAGTAAAAGATCAAAGAACAATAATAAGCAGTCCAACCTAATAAGTCATATTGATCAGTAAGCTGTGTATCTTCCCCATCTGAAAATTCACTAATGAGAATCA----GCAGTGGCTGATCTTAAAATGCTTTGAAACTGTGATAGGCTCATATGGAAAGTAAATGAAGTGAAAGACAA-------GCCTCAAACAGTGC----AAAAATAATTCTGCTAACCTCTTCGGTTTACTAATTAGTAATACATTTTGTTCTTTGGAGCCCCGAGAAGATCTAAATGGCTGAGGCATTTAAATAATGAATAGAAAAGAAATAGGGAAGATAATTTATCCTTGTCTATTTTTAATTAG----TATAAACATTTGACTAGATTAGCCTATGTCAACGTGTACTGGAGCTGAAGCTAAACTTCATTTAAGACACATGTGAAAGATAAGAACTACTAGTCAGAGACTGGGTCATAACTACCAGCAGTCAATCCAAAGAGGCTTTTAGGTATATTTTTAACGCTGTGGGTCTTGAGATCATCAATGAACATTTACTCAATGCCCACTTAAGGAGTCTCTTTTTCTATTGAATATAGTGTAT-TGTACAAAACAATATTTAAAAAGTGTATGTTTTAGAAATATTTGGAAGTTCACACAAATACAAAATCCAAACACAACTTACCGTAACTTCCAGTCACATTGGCACATATAACAGCCCCAAAGAATTCTGGAAAATGCTTCTGGATTCTTGAAATCACTTTTTGGCAAGCTATGGTTGGATCTTCTCCTCTTCTCATGTATTCTACAGCTTGGTAGCTGATTGAAACA chr4 - 94230402 50578007 50578006 50578869 43651534 43651533 43652396 863 CAATTGCTAATTCTTCTACAATGGTTTAATTAT--TCTTTTACAATCTGTTTAGCCCAA-----GACATCTTGAAAGTATTTATTTTTAAGTAAAAATACTATTCTACTGTCTGTTCTATAATACAACTCAAAACAGTACC-----ATAAGTTAAGAAAAAAAATGTATCTATCTTTCAATCCTGATTAACTTAATGAG----------TTCCTCCAACCCTAATCTCTTAAACACAGAACTATGAGAAATAAAAGATCAAAGAATAGCAATAAGCAGTCCAACTAAATAAGCTGTGTTGATTAGCAAATTATATTTGCTACTGATCTGAGAGTTTACTAATGAGATGCCTGGCACAATGACTGATCTTGGATTGCTTTGAAGCTATGCTTAAC-----------------------AACCACAATCTCCCTGCCTTATGCCatatttaaaaaaaaaacttta-------------------aattaatCTTACAC-----------AATCTAGGAGAACACATAAA-GGTTG-------TAAATACTT-------------------------TTTATTTTTATGAAGTCTTACATAAATTCTGTAAACATCTAAA-----------ATATCAAAATGCAGAGGAG---AAATTAAAATATCTCAATTTCACATGAGG-------------CCAGTT---------GTCCTGATAACCAGCCTTTGATATTACGAA-----TGGCAATATT------GCTGCAGTACTTAAG---------GAGTAATTAATGACTGCTGTTTTAAAG--------TCCCCCATAAATTTTGCATATCTGTG---------ACCTGGACAGGGT------CAGCAAAATTGGTCTGTTGAGCAAGATACA----------------TACCATAACTTCCAGTTGTATTAGCACATATAACAGCACCAAAGAACTTCGGAACATGCTTCTGAATCCTGGAAATAACTTTTTGACAGGCTACTGTCGGGTCTGTTCCCATCCTCATATACTCCACTGCTTGATAGCTAAAACAAACa ..x:..:x.....x..:.....x:.x.......--.:....x..x......x.::....-----::.x.::.:.x.:x:.......:.x.:x.:::.xx.x..xxx....:..--.x.x.:.....---:...:.xx.x..-----....x..------------x...:x.::...xx:..:.::.--:.....x:.:----------......x...x--.:.:.:.:...:.:......:..:...:...............:.::...............:x......:::.:.....:..:..::.:.:.x.x:.x.:x......:.:..:..........xx.x----:..:..:........::.x.........:..:..x.x::.-----------------------..xx....-------....:.x:.x:.::----.....x..:.:.:-------------------.....:.xx....:-----------:.x.:xx.....x.:x....-..:..-------......x.x-------------------------.....::..:.xx.x.:...xx..:----.:.......:.:.x-----------..:....x:..:.xx....---..::....x.x:x.:x.xxx......x.:-------------.:...:---------...x.:.:x......xx.::..x:x.x..:-----.:.xx.....------....::.xx...:..---------..::.x...x.x.x...:xx:....:.--------.::.:xx.:...x.x.::...-...:---------.::.::.x..x..------:..x..x...x.xxx...x.xxx.:.....----------------....:...........:::...:..............x........:.::....x.........:..:..x.....x........:..:....:x..:..:...x:...:x.:.....:..:..:..x.....:.....:.xxx..... 33M2D24M5D49M2I11M3I12M5D7M12I22M2I10M10D11M2I128M4I40M23D8M7I14M4I13M19D14M11D20M1D5M7D9M25D25M4I14M11D19M3D29M13D6M9D30M5D10M6D15M9D27M8D21M1I4M9D13M6D30M16D149M 551/822 67.0% 863/94230402 0.0% 244/822 29.7% 126854328 63360227 +6473 chr4 + 190214555 177434368 177434367 177434491 124 CTAAGAAGTCATACCTTGGCAGGAAGCGCATCAATATATCACCATTCCCAGTGGCTGCGGCTGCCCCTGCAGTATCGTCAGCATAGGCTCCAGCTCCAGGTATTGGTGAGTCTCCTACACGGCT chr4 - 94230402 50581000 50580999 50581121 43649282 43649281 43649403 122 CTAAGGA--CAAACCTGGGTAAGAACCGCATCATGGTGTCACCATCCCCAGTGGCTGCAGCTCCTCCAGCTGTACTATCAGCATACGATCCTGCTCCAGCTATAGGAGAATCTCCAACACGGCT .....:.--..x....x..:.:...x.......xx:.:.......:............:...x.:..x..x...:::........x.x...x.......x...x..x..:.....x........ 7M2D115M 95/122 77.9% 122/94230402 0.0% 2/122 1.6% 126853368 63361187 +4124 chr4 + 190214555 177436262 177436261 177436360 99 TTGGAAACACTAACCCATGTATTTTGAATTTTATACCATTTGTAGATGTACCAGCAGCAATATGTCCTGTCTTATGGATTACAACCATGCCTAGAAGTT chr4 - 94230402 50581928 50581927 50582026 43648377 43648376 43648475 99 TTAGAGATACTAACCCCGGAATTTTGTGGACGCCACCATTAGTAGATGTCCCAGAAGCAACGGTTCCACTCTTACCAATTACAACCATACCTACAATTT ..:..:.:........xx.x......x:xx:xx:......x........x....x.....::xx...xx.....:x:...........:....x..x.. 99M 70/99 70.7% 99/94230402 0.0% 0/99 0.0% 126854334 63360221 +9488 chr4 + 190214555 177439567 177439566 177440437 871 AAAAAATACCTGACTCTCCTACTAAAAGTGTGTGTGTTGTATGTTCCAGTACTTTCCGTGCCACACCAATAGCATTTTTAATTCGTCTGAGATCTCCTACTGCTCCTACATCCATAGTAGTGCTGCAAGAAAA-------TAGAATGCAGTTAGGAATTAAGGAGTTTTCAGAGGTTCATAGATTAAAAACATTGCTTTTCTCCAATCAATAGTGTTTTGC-----------GGTTAAACTCCACCATCTTAACACAGAAGTGA-CAGCACATCCACGAAGTTCATATAGATTCCCACAATCAGACA--------------AAATTAAGGA-------AAAAAAATAGAAAATCAACTTGCCATGTACCACAACAGCACTAAAATTCTCAGTTTCT---------------CCAAGCTAATTTTAAATA--TGGCTTTTGAAAGGGGC---CTGAAGGCTTCAGGTCAGGCAAACCACAGCATTTGTGGACAGCAGATAAATGATTGTTTATAAGGTCAGAGACATAGTTTTTTAGCTTGGCATTCTCCCAGTTCTAAGGGACTACCTATCTCTCCA----------------TGTGATATTTCTAT--------TACTCTGATTTTTTTTTTTCAGTTGAGAGGGAAACT-GTGTTTAGAAAGGTCAAG--------TATAATAAGCTAGGGGTT---TTGATCTGTGTCAAAACTCATGCATTCTTTCATCTTGCTCTCAGAAGACCACAACTCTAAATGTAACTCAACATAATAAATAGGACCTGAACGGTGTTCTTACCCATCCATGATCATGGCATCTAGTGTGGTTTCTCCAAGTTCATCAGGACTTCCTCCAAAGCCTACAGAGCCGTCACACTGCTCTCTCTCACACATGGCACAGCCGCTCTCCACTGCATCCAGGGCAGAGCCTCCAGATGCTAATGCCCTCCACGCTGTTAATCAA chr4 - 94230402 50585578 50585577 50586459 43643944 43643943 43644825 882 AATAATTACCTGACTCTCCCACTAATAATGTATGCTTAGTGTGCTCAATGACCTTTCGTGCTACACCGATTGCATTTTTCACATGTCTGAGATCTGCAACTGCCCCAACTTCCATAGTGTTGCTGGAAGCAAGACATATTTAGAACTTATTAAAAAA--AAATAGTTGCATAATTTGTATTTGGTAAAATTTTTCCTCGTGTAAAATGAAAAATCTGTCGCTTTAACATATTGCTTTAATTGT-CCTGCTCCACAAACAAGTGGGCATCCCATTAGTAGAGAAGAAACTGACAGGTACACTGATACATTGTAACCTTGCATAGGTTAGAGATGTTGCTGAAGTAACAG----TTACTCTGCCAAGAACAATATTTTCAGTGGGGTAACTACTTTGTTACACAAACTCATAACCAAACCAATTAGCAGCAATTATTTTCTAAACAGGACAGTCTAAA------ATGGTAAATAAAGTACAGAA------GACAATGGCTACAGAATTAATCTAAAGA--AAAAGCTTAGGAT----GCTACAAACTCTTCCCTTTGCAA--------CTATTTATCAAGAGCTGGGTTAATGACTGCAAAAATTCCCTAATAGACATACTTGGTTGTTCTCCCATCAAGTGAAATAAGAACTTGTCCATAGATAAACCAATAAGACCACTATGACAAATT-----TTACATTAAAATGTGTTAAAAATTACAGATAC---CATTTTTTTTTT-------------------------------------------CCTCCACAGTTATCTTACCCATCCATAATCATTGCATCCAGTGTTGTTTCTCCACTTTCATCTGGGCTTCCTCCATATCCCACACTCCCATCGCACTGGTCAATCTCACACTGACCACAGCCTTTCTCAACAGCATCCAGCTCAGAACCACCCAACTGTAATGTTCTCCATGCTG-TAACCAA ..x..x.............:.....x.:...:..:x.x..:..:..x.xx..:..:.....:.....:..x........x.:x:...........x.x.....:..x..x........:x.....x...x..:-------.....:x:.x.x.::..--..:x....x:xx:.xx.x:..xx:x.....x:x..x..:x.x.xx...x..x.:.x.x.:..-----------.x..x..:.x:-..xx..:x...x.x.....:-..x.x...:x::::..xxx.x.:x..:xxx:...x.x.x...--------------.::...::..-------:..:x..:..----.:.x::.....x.x..x.:.x:xx..x.::::.xx::.x...x.---------------....:.:....xxx.::.--.:x:..:.:..x:..:.---..:..------.x.x:.:::...x:....x.------....:::.x..x.x:...:x.:xx...:--.:.::.x...xx.----...xx:x.:...:..xx..x:..--------....:.x..x.----------------..::.x.x...:x.--------....:x.x.x..:.:::x...:x...:.x:::....-..x:x....x.:::...x--------...:.:..::.-----..---..:.xx.....:....x.:.::x..x.---...:..x:.:.:-------------------------------------------...xx..:..xx..............:.....x.....:.....x.........xx......x..:.........x.x..:...xxx..:..:.....x..xx........xx:x.......x:....x..x........xx....:..x..x:.:xx.....::.....:....-...:... 133M7I17M2D62M11I11M1D20M1I42M14I10M7I10M4D44M15I18M2I17M3I5M6D20M6D28M2D13M4D23M8D11M16I14M8I36M1I18M8I11M5D2M3I27M3D12M43D175M1D7M 500/786 63.6% 882/94230402 0.0% 181/786 23.0% 126853989 63360566 +3780 chr4 + 190214555 177442195 177442194 177442328 134 CCCCACCCGCAAGCTCTCGCGGCGCAGCCGCCCGCCCAGGCCGCCAACCCG---CACCTGCTTCGGTTGCATTCTTAAAGGGCCAAGTGTTGACGACCAGGGGCAGAGGGCTGGAG--CAGCGCACTAGGGCCTGGCAG chr4 - 94230402 50588112 50588111 50588247 43642156 43642155 43642291 136 CCCCACCAGCGGCCCCTGTGGCCGGCACTGCCCTGCC---CCGCCCCGCCGGAACACCTGTCTCTGTGGCCTTCCTAAACGCCCAAGTGTTGATGACTACGGGCAGAGCGGTAGCGGCCGCCCCACACGGGCCCGCCAG .......x..::x.:..xxx.x..xx:.:....xx..---.....xxx...---......::..x..x..x...:....x.x...........:...:.x........x.x.:.x.--.:x.x...xx.....:.x... 37M3D11M3I62M2I21M 91/131 69.5% 136/94230402 0.0% 8/131 6.1% 126854083 63360472 +10132 chr4 + 190214555 177447369 177447368 177447715 347 CACAAACTTTTTTGACTTTTTAACCTTTAAAAGTCATCTTAGTGACTTATAAAG-ACCAAGATTGTGCAGTAGAATGTGGGCCTATTAAGTTATTTCTTATCAAAATAAATTATGTACAACATATTTTCAATGTGTAATTGTAATACTGGGCCACTGCTGTGATATAGTTTTCATAACAAGGACATAGTAGACTATTAAACATGGTGGATCTTGCTTTTT-GTGACAGTTGTTTATAACATTATGATGTCATCATAAATGTGATCCATTACAATAGTAAAGCCTTAGGGC-AACAGAGTAGATGTCAGGATGTCTTCCTACCACTTAAAAAATGACTTTGACATTGTTAA chr4 - 94230402 50591265 50591264 50591608 43638795 43638794 43639138 344 CATACACTCTT---ACTTTTTAACCTC--AAAATAATTACTATGTGTTACAAAATATTGTGTTCATACAGTATTGTTTTGGCCTGTTGTAGTGTTCTGTCTCAAAACAAGCTAGGTGTAATATATTTCTTTCTCATAATTGTTACACTGGTCCACTGCAGTAATAAAGTTGTCACATGGAACATGTAATGGGCCACTTTACATTGTTGAAACTGCTTTTTTATTACAACTGTTTGTAACTTTATGATGTCTTTATAAATGTGATCCATGGCAATAATAAAGTTGTTGGACAAATACAGCAAGTTACAGTTTG-CTTCCTCGAACTCTGAAAGTTACCTCAACTTTGTTAA ..:.x...:..---............:--...:.x..:x:x:..xx...:...:-.:::x.x.::.:.....xx:.x.x.....:..:x:x.:..::x.x......:..::..x..::..:......::xx:x::.......x.:.....x.......x..:...x....x...:.xx:.:x.::..:.:.:.:.:.xx....x..x..xx:........-:.x...::.....:....x..........x.:...............x:.....:.....::x.x..:.-..:.x..:.::.xx...xx..-......xxx...:x:...:.x..:.::..x....... 11M3D13M2D25M1I165M1I69M1I21M1D37M 224/341 65.7% 344/94230402 0.0% 9/341 2.6% 126856104 63358451 +3321 chr4 + 190214555 177453724 177453723 177453775 52 AAGTGGATTTTTTTTGTTTTGTTGTTTTTTTATTTTTGTTGTCGTTGTTTTT chr4 - 94230402 81444611 81444610 81444662 12785741 12785740 12785792 52 AGGTGGTTTTTTGTTGTTATTTTGTTTGTTTCTTTTTGTTGTTGTTGTTTTT .:....x.....x.....x.x......x...x..........:......... 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 96009113 94205442 +3605 chr4 + 190214555 177457141 177457140 177457220 80 TCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCTGAGCTCAGACGAGAGCAGGCATGTTCAGGGTGGTATGG chr4 - 94230402 91940509 91940508 91940586 2289817 2289816 2289894 78 TCCCATCCAAGCACTGACCTGGCCCAATCCTGATTAGCTTATGAGATCTGAGAAGGTCA--CAGCTCGGAGGTGGTGTGG ...........:...:...x.....:.:....x.......x....x..x..x:..:x..--..xx.:x::......:... 59M2D19M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% 85516632 NA +3420 chr4 + 190214555 177470742 177470741 177470798 57 AAGTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTGAGACGGAGTC--TCGCTCTGTCG chr4 - 94230402 51296815 51296814 51296873 42933530 42933529 42933588 59 AAGTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTAAACATAGGGTCCATCACTTTATTG ..................................x:.x.::.:...--..:..:.:.:. 46M2I11M 47/57 82.5% 59/94230402 0.0% 2/57 3.5% 126173927 64040628 +3394 chr4 + 190214555 177470847 177470846 177470905 59 CTCCTGGGTTCACGCGGTTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:.x...x.xx.x........:............:......x.::. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 159273708 30940847 +22239 chr4 + 190214555 177478954 177478953 177479837 884 CTCTGTCTGTGCCTGAAGATTTCAGGAATAAATAGATATTATGGATCAAGAAAAGA--ATAAGAATAAAATTGTGAAGTTGACCTAGCTATTAGAGA----ATATT-TTTCACTATTAGCTTGGAAGAAG-ATCTGCTTCAATAGCGTATGATATCGGAACCCTGACTTTGGAGGCTTCAGACAT-CCTGAAATATAATTCAGATAATATGAAAAGGATGCACGCTGAAGCCTCTAAAGCTCTGTTCCTGCAGATTTTCATCTCTTCCTGTTACGAAACTAAAATGATAGCCATTCTCTTATCTGTGCACAAGGTATAAACAAG--TTAATTGATGGCTGTTCTTCCTGAGTTACATTCAGTCTACTGGGGAAAACCTATGTGTAATGAGTTTAGAAATAGAGTGAATTAGAATGTAATGTCACAAATAAGCAGTGAAACTTTAATTCATACTTTTATGATAGCCAACTTAGATTACTGTAATTCTCTG--------TCTCCTTCAGGTGTCCCACTGGAAAAAGAAAAGATAGCTTGTACAAGTATGCAACCCCTGAGATTTTAAGCACGCAGAAT--CTGGTCAACATACACCTAGACTTAGAGATTTTGGTTCT---AGCTGCCAGTGAGCTACTAGATTGATTGTAAGAGGTCCTAGTGATGTGTTTTTGAAACACTGCATGAATCCAAATGAGTTTTAGGTTCCCTATTGTCCAAGCCGAATTTTGTTCAACTGTAAAAACGTTGGGTTTTTATTTGTTCAGAACTACTATTATAAATCACAATGCCCTATAG---TTTTTTCAAGCACTTGTGGAATATATTTTTCCCAGACAGATTCAGAATATCAGAAGTGTCATTGAATTTAGGTCAAGACTAAAGTGACTTGTTTAA-TTTGTTTTCTTTCA chr4 - 94230402 50603461 50603460 50604346 43626057 43626056 43626942 886 CTATGTCTCTGATTAAGCATCATAGACAAAAAAGGATAAGAAGATCCAAGGGAAGATAAGAAGAGTAGAAGTAAAAAGCTTGCACAGCTATTGGAAATAAGACATTATTTTGCTCCAGACTCAGTAGGAGCATCTGATCCC----CGTTTCCTAT--GAAGTCTAGTTCTGAGTGCCCCAAAATTGCTTTAAACATGAAAAAGATGA---GACCACTGTGCTTAATAATGCTGTTAA--CACTGTGTCTGAAGATTT--GTCCCTTCACTGTACCACACATAAATACTGCTTGGTCT-TCATCTGTGCAGAATGTAGAGGTAAACTTTAATTGAGGGTTTCTCTTTGGGGATCATGTGCGTTCAAGGGGAACAAAACTCT-TATTATCAACCTGGAAATTTAACAAGTTTGAGAGCATTGTCACATAGAGATACTGAAACGTTAATTCATGCTTCCGTGACATCTTGTCTGGATTACTATAATTCCCTGCTTGCAGGTTTCACTCAGCCCTCCTTTCACAAAATAAGAA-----CTTGTACAATAATGTAACCACTGAGATTTTAAGCATGCACAATAGCTGGTCATCATACATCTCTGTGCTGCGATCTCAGTGCTGCAAGCCACCAGG----TACTGGATCGATTTGAAGA--TCCTGGTGATGTGTTTTAAAAACACCGCATGTATCCAAATGAGTTTTTGGTTCCCTATTGCCCAGGCCCAGTTTTACCGAAGTGTAAAAATGTTGCTCTTTCATTTGCTCAGAGAGAGAATTATACATTGCTGCATCCCATAGCTTTTTTTTCATGCAGCTACGGAGTGCACTTTGCCAGAAGAGGTTTGGCATGTCAGCCTTGTCATTGACTTGAGGTCAAGATGATAGTGGGTTTCTTAACTTTTCTTTCTCTCA ..x.....x..x:.:.:x..:x:..:x.x...x:....xx.x.:x:....::....--.x....:..:..x.:x:...:.x:.x:.......:..:.----.:...-...::..x:x::..::.x..:..-.....x.:.x----...x.xx...--...x:..:::.:..::x..::..:.xx.-.:.x...:..:.xxx....:.---..xx.xx:...x::x.:.x..:x:...--.x....x:...x......--:..:....x:xx...x.x..xx....:x.:x:::x...-.:.........x..x...x.:::..:--........x..:.x:....:xx.::.:.::.x.:x..x.xx..::x...x..x.-.:.x..x.:::.:.....xx.:::.:..x..:x.:.x.......x.x.:::.x......x.........:...:::...:.x.:x:::.:.......:......:...--------.:..x:....x:x...:x:::x....x:.:..-----.........xx...:....x...............:...x...--.......x......:..xx::x:x.x...:.::..x..---...::....x----....:...:....xx....--....:............x:......:.....x...............x............:...:...x.:....:::x..x........:....xx:...:.....:.....:xx.xx......x..::.x::::..:....---........x...x:.::...:.::.:...x..x::.x..:..::.x..:....xxx.........x..x.........:x.x....:x..x:....-...x:.....:... 56M2I39M4I5M1I23M1I10M4D10M2D28M1I21M3D27M2D18M2D38M1D26M2I54M1D108M8I32M5D43M2I38M3I10M4D19M2D143M3I96M1I14M 564/858 65.7% 886/94230402 0.0% 54/858 6.3% 126875493 63339062 +3209 chr4 + 190214555 177481902 177481901 177481987 86 TGTATATATACACATACATATGTATTTATATATATATATATATACATATATATATACACACACACACACACACATATATATATAAA chr4 - 94230402 8395793 8395792 8395874 85834529 85834528 85834610 82 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACA----CACACACACACAGACACAAATGAATAAAAA .....:.:.:..:.x....:.:.x.x:....:...::x..:..xx...:.:.----............x.....x..:x...x... 52M4D30M 58/82 70.7% 82/94230402 0.0% 4/82 4.9% 169086109 21128446 +3851 chr4 + 190214555 177481902 177481901 177481987 86 TGTATATATACACATACATATGTATTTATATATATATATATATACATATATATATACACACACACACACACACATATATATATAAA chr4 - 94230402 8395791 8395790 8395872 85834531 85834530 85834612 82 TGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACA----TTAATACACACACACACACACAGACACAAATGAATAAA ...:...:.:::....x.:.........:....:...::x..:.----.xx...:...............x...:.x..:x..... 44M4D38M 61/82 74.4% 82/94230402 0.0% 4/82 4.9% 169086111 21128444 +3156 chr4 + 190214555 177481905 177481904 177481982 78 ATATATACACATACATATGTATTTATATATATATATATATACATATATATATACACACACACACACACACATATATAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.::.::.::::..:x.:x.:...x..:....:...:.x..:..xx...................x.:.:.x.. 78M 51/78 65.4% 78/94230402 0.0% 0/78 0.0% 169086117 21128438 +3367 chr4 + 190214555 177481912 177481911 177481983 72 CACATACATATGTATTTATATATATATATATATACATATATATA------TACACACACACACACACACATATATATA chr4 - 94230402 54293151 54293150 54293228 39937175 39937174 39937252 78 CAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ..x..:..:..x...x.......:...:.:...:xxx:...:..------.......x...::............... 44M6I28M 55/72 76.4% 78/94230402 0.0% 6/72 8.3% 123188761 67025794 +17059 chr4 + 190214555 177494156 177494155 177494533 378 TGGGGTACTGATTAGATTTTTGAACTTATGTTTAGTTCCTAAATAACTTTTCTTTTGCCAGACCACCATGTCCTTGAAAAGTTAATTTTGTTTTATCTCCGGATACAGGAGGCTTCACATGACAATGGCAGTTGAAAGCTTCCCAGGTAAAGATCCTTCAAAGAATAAGCAACTCATGATAGGGAAGGATAAAAGTCAACAGTTTATACCACTCAACTGCTTTTAAGATTTTCATCAAATGCATCCCCTGCAGTTGAAACTTACTAGAGAAGCTTCCCAGCAGAGTTAAAATCATAAAACAATGACAATGTTACCTTTGTTTCTCTG-AGCTTTTAGACAG-GAAAGACAGCCACCGAACTGTGTATCAACTTACTTTCT chr4 - 94230402 50608071 50608070 50608436 43621967 43621966 43622332 366 TGGGGTGTTG-CTGTACTCTTGGAATGAAGCCT----TTCAAGTAACTTTCCAGTTTCCGGACCACTGAATCTTTGCAAAGTTAATTTT----TATCTGCAAATATAGGAAGCTTAACACAACAATAGCAGTTCAAAGCCACCCAGGTAAAGAGCCTTCAAAG----AGTAATTCGCAATACAAATTCATAAAAGTCAACAGTTTAGACTGCTCAATTGCTTTTAAGATTTTCATCAAATACA-ACTCAGCAGTGGGAACTTACCACTGATGCCTCCCAACTGAGTTAAAATCAGAAAACACTGACAACGTTACCTTTATTTTTCTGTGGGTTTTAGACAGCAAAAGATAATAACTGAACTTTGCCACAATTTACTTCCT ......::..-:.:x.:.:...:.x.x.x.::.----:::..:.......:.xx..x..:......::x:..:...x............----.....x.::...:....:....x...::.....:......x.....:x............x.........----..:..:..:::...x::.xxx..................x..::.....:.......................:..-x.:.x.....x.:.......:.xx..x..:.....:.x............x......x......:.........:...:....-:.x..........-:.....:.::x..:.....x..:xx...:......:.. 10M1D22M4D52M4D70M4D76M1D83M1I13M1I38M 276/364 75.8% 366/94230402 0.0% 16/364 4.4% 126886085 63328470 +3146 chr4 + 190214555 177516615 177516614 177516671 57 CTCCCATCTCAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAATTAGTTGGGCATG chr4 - 94230402 27825828 27825827 27825884 66404519 66404518 66404575 57 CTTCCATCTCATAAAAAAAAAAAAAAGATGAAAAATAAAAGGAACGTGTTCAGCATG ..:........x................x:....:x....::..:xx...x:..... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 149690787 40523768 +3127 chr4 + 190214555 177521184 177521183 177521260 77 AGACTTCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACAC chr4 - 94230402 84287640 84287639 84287714 9942689 9942688 9942763 75 AAGCTTCATATTGAAAAAAATAGGAAAAATACAGTA--TGTGCATGTATACAAATATATCTATACATGCATACACAC .::......x.::.......x.::.....x.x.:x.--.:.::..:....:.x......x......::..:...... 36M2D39M 53/75 70.7% 75/94230402 0.0% 2/75 2.7% 93233544 NA +3077 chr4 + 190214555 177521191 177521190 177521265 75 ATCTCAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACATA chr4 - 94230402 37024476 37024475 37024550 57205853 57205852 57205927 75 ATTTAAAAAAAAAAATGAAAGAAAAGAAAAAGAAACACGAAAATGTTCATATATGTTCATACGCTCACAGAAATA ..:.x..........x:...:....:.....x.x.:.::x.x..:.x:......:.x..:..:.x....x.x... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 140496715 49717840 +3464 chr4 + 190214555 177521196 177521195 177521259 64 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACA chr4 - 94230402 60979342 60979341 60979400 33251003 33251002 33251061 59 AAAAAAATAATAAAAACAAACAAAAAC-----TCTATATATACACATATATACACACACACACA .......x..x.....x...x.....:-----.x........:.:................... 27M5D32M 51/59 86.4% 59/94230402 0.0% 5/59 8.5% 116541854 73672701 +3119 chr4 + 190214555 177521199 177521198 177521259 61 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....x:x.................:.:.:....::..x.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 106813620 83400935 +3036 chr4 + 190214555 177521201 177521200 177521261 61 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::..x.x:x.................:.:......::..x.x.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 106813622 83400933 +3017 chr4 + 190214555 177521204 177521203 177521242 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 108083465 82131090 +3144 chr4 + 190214555 177521210 177521209 177521274 65 AAAAAAAAAAAATATATATATATATATATATATATATACACACACACACACACATATATATACAC chr4 - 94230402 64433200 64433199 64433264 29797139 29797138 29797203 65 AGAAAAAGCAAAAATTTCTCTGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC .:.....:x...x..x.x.x.:.:.:.........x......:......:..:.::...:..::. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 113088010 77126545 +3062 chr4 + 190214555 177521219 177521218 177521264 46 AAATATATATATATATATATATATATATACACACACACACACACAT chr4 - 94230402 10572844 10572843 10572889 83657514 83657513 83657559 46 AAATATATATAGAGAAATATATATATATGCACACACAGACAGACAT ...........x.x.x............:........x...x.... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 166948375 23266180 +4236 chr4 + 190214555 177521234 177521233 177521351 118 TATATATATATATACACACACACACACACATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATATATACATATATACACACATATATACGTATATT chr4 - 94230402 73121102 73121101 73121217 21109186 21109185 21109301 116 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATAT--AAATACGCCCACAGAGACACACATGTATAAGCAAATT .:.::..::....x..:.....:.:.....x.x::..:x::...:..:....x:....::x.....:...x:..:....--.x...:::x..:.x.x........:....x.:.x... 79M2D37M 76/116 65.5% 116/94230402 0.0% 2/116 1.7% 104400132 85814423 +3261 chr4 + 190214555 177521237 177521236 177521349 113 ATATATATATACACACACACACACACATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATATATACATATATACACACATATATACGTATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATA ..x..x.:...:.:.............x:x.:....:..::x:x:.x.::.:.::...xx.x:.:.x..x.....:...:..x...x:....::-....x.:.:xx..:.... 94M1D18M 70/112 62.5% 112/94230402 0.0% 1/112 0.9% 173103894 17110661 +3583 chr4 + 190214555 177521261 177521260 177521368 108 ACATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATATATACATATATACACACATATATACGTATATTATACACATATACATATA chr4 - 94230402 4417349 4417348 4417454 89812949 89812948 89813054 106 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTT--AGATATACACATATTTATCTATATGCCACAAACACTAACATATA .........:...........x:x.:....::...x:x::x..:.:..:...xx.x::..x.--.x.........:..x...x::...:::.:.x...:xx....... 62M2D44M 70/106 66.0% 106/94230402 0.0% 2/106 1.9% 173103912 17110643 +3195 chr4 + 190214555 177521263 177521262 177521325 63 ATATATATACACACACACATATATATACATATGTATACGTGTATATATATACACATATATACA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA .:.x.....:.x.....x...:.:......:..x..:.x......x.:.:.::........:. 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 160000514 30214041 +3028 chr4 + 190214555 177521284 177521283 177521353 70 TATATACATATGTATACGTGTATATATATACACATATATACATATATACACACATATATACGTATATTAT chr4 - 94230402 32959568 32959567 32959637 61270766 61270765 61270835 70 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATGGTTGTTAT .:.:...x...::..:x....x.:.:..::::.:................x.:....x:.:.xx.:.... 70M 47/70 67.1% 70/94230402 0.0% 0/70 0.0% 144561716 45652839 +3364 chr4 + 190214555 177521322 177521321 177521439 118 TACATATATACACACATATATACGTATATTATACACATATACATATATAGTATATATACACATATATACGTATATATACACACATATATATACGTATGTATGTGTGTGTATATATATA chr4 - 94230402 82696738 82696737 82696841 11533562 11533561 11533665 104 TGCATGCGTGCACCTGCACGAACGTCTG-------CAAGTACATATATAGTAAAAATACGTATTTGGAGGCATATACACACACACATATATATTTAC-------CCTGTATATATACA .:...:::.:...x:::.::x....x.:-------..x:.............x.x....::..x.:x.x.:.....:.......:.......:x..:-------:x..........:. 28M7D62M7D14M 71/104 68.3% 104/94230402 0.0% 14/104 13.5% 94824584 NA +3059 chr4 + 190214555 177521405 177521404 177521458 54 ATATATATACGTATGTATGTGTGTGTATATATATACATACACACATATATATGT chr4 - 94230402 56650830 56650829 56650883 37579520 37579519 37579573 54 ACATTTGCACAGCTATATGCGTGTGCATTTATATACATACACACACATATATAT .:..x.::..:xx.:....:.....:..x................:......:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 120870575 69343980 +3198 chr4 + 190214555 177530543 177530542 177530594 52 ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTGCCTGTGTC chr4 - 94230402 92735353 92735352 92735404 1494999 1494998 1495050 52 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTC ..x.....:...:..:.:...............:.x.......x:....x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 84795190 NA +17578 chr4 + 190214555 177531465 177531464 177532002 538 CTTGCAAATATGTTTCTAC---TTGCCATTTTTAAATTACTGTTGCCTTTGGATGTGGGAGAATGTCTTCCTTTGTCAAAATGGCAATAGGAGGCACAAGTGACAATCCCTTTTC-------CTTAAGATTTGGGACTGCACAAAGCTGTCAGTTTTTAAAATGACACTGTGCCACAGCCTTTCTCTAAGGTGGTGCCTTTCATTTTTGACTCCTGCTG--TTCTTGACAGTTGAAATGGCAGCAGGAGGTAGAAACTAAAGTAAGTTCTCTTGGCATTTGCCCTTAGGTA-GAAATTAATAATTGAAGAAGCAGCCCTGTGTTTAAAAACAGTTAGTGTCAGATGTCACGCAATGGAATGTGACCAATCCCCTAATGAGATGACCCAAACTGTCCATAATTTTCCAGAGATAGACTTAATTCTCACACTTGCTTGCAATGTT-CATCTGTGTTC------TTATACTTAAAGAAC-ATTTAATATGTTCTAGAATA--TTATGTTCTACTTCAAGAACTATGCCAAAAATTCCAACTGGATTTTT-----CACTAAACCCTAAAT chr4 - 94230402 50613645 50613644 50614195 43616208 43616207 43616758 551 CTTACAAACACTCTGCCGCAGTTTTACATTTTTGCCTCCCACCAGCATTCAAACCTGGGTGAATGTCTTTCTCTGTCAAAGCAGCAGTGGGAGGTGAAAATGAAAGTCCTTTTTTTTCTTTTCCTGAGAAATTGGACTGTAAAAAGCTGTCAGTTTA-AAAATGACATAGTGGCACAGCATTTCTATAAGGTGGCTCCTTTCATTTTTGACTCCTGCTGTCTCTCTGACAGTTGAAGTTGCAGCAGGAGGTAAAAACTAAAATGAGCACTGCTGGCATTTGCCCTCAAGCACAAAATTAATAATGGAAGAAACAGGACGACGTCCAAAAACACCCAGTATCGGATGTCAGCCAATGAGGTTTCAATACTCCCGTAATAAGGTGACCAGAGCAATGCCCATTATTCCAAATATGATCATATTCCCTA---TTACCT--AATGTTGGATCTATTTTCCCCATTTTATATTTGATTCCCTGTTTTGTGAGTTACAGAATGTTTTAAATTCTACT--AAACACTATGCAA-------CGACTTTATGTTTTCCCCCTCTGCACCCTAGAT ...:....:.:x:.x.::.---..xx.......:xx.:x.xx:x..x..:::.:x....x.........:..:.......:::...:.:.....::x..:...x.:...:....:-------.:.:...xx.x......:.x..............x-.........:x...x......x.....x........:x.......................--.:::...........:.x.............:........:.:..:x..x:.............:.:.:.-:...........x......:...xx.x::..::.......x::...:..:.......xx.....:::.x.x.x:.x....x....:..:.....x:.:.x:.x.x:.x.x.....:.x..::x.x..x.:.::.---..:.:.--......-x....:.x...------.....:..:.xxxx.-:...x:.:x...x:.....:--...x:.......--..:x.......x.-------.:...xx..x...-----.x..:x......:.. 19M3I93M7I35M1D61M2I70M1I134M3D6M2D6M1I11M6I15M1I20M2I12M2D13M7D13M5I15M 372/523 71.1% 551/94230402 0.0% 43/523 8.2% 126917820 63296735 +4756 chr4 + 190214555 177568937 177568936 177569135 199 TGACCTTTAAGAACAGCAGCATCAGAGGAATCTGGGGAAATATATGCTTTGAACATTTAATAACAC---CAC-------TGCCATGACTTA----GTGAATATTTCCATGCCTGTGTATTATGAAAATATAGCACTGGGACCATGGTTGAAAAGTTCAAAACCACAAAAGCTGAAGAATACATGGCATTTCAAATGTCTGCATTACTGTTCTG chr4 - 94230402 50623567 50623566 50623776 43606627 43606626 43606836 210 TGACCTCTAGAAAT-GCAAAGTTAGATAAATCTAGGGACATATA--ACATGTACATGTAATAAAATATGCACATGTACATGTAATAAAATATGCTGTGAATATTTTCTTATATCTCTATCAAGAACATACTGAGTGAAGATTGTGACTGAAAAGTTCATAAGCACAAAATGTGCTGTGCACATGGGGTTTTAAATACCTGCTTTGGCTCTCTG ......:..::..:-...:x:.:...x:.....:....x.....--x:x..x....x......x.:---...-------..:x..:.xx..----..........:.x.::x.x.x...:.x...x...:x.x::x::..:::..::...........x..x.......xx..xx.x::......x:...:....::....x..:x:x:.... 14M1D29M2D20M3I3M7I12M4I118M 129/196 65.8% 210/94230402 0.0% 17/196 8.7% 126945370 63269185 +25044 chr4 + 190214555 177569607 177569606 177570574 968 CAAAAACATTGCATTGTTGGACAAATGCCTAACATGAATCTTTCCCAAACT-TTCGGTTGGGGAAGCAAATATGTGGAATAATGCTCAGAGCCATTTGCTGTTCAAAGGATTTCAGATCCTCCATCCAGCCCCACAGATACTCAGCCTTTGCTACAGTTTTAGCAGCATGCTTGGCTTTTTTGACAGCAGTAATAGCTCTTTGGCCCACTTTCTCTTCTAAACTTTATCTAAACTTCAAACTCTTTGGCTTTTTCCCCCTCT-TTTGCTAAAGCTAGTGATCACATGCTGAATAAATAATCTATAGACCATGATCTCCTGTCCTGTCAGGCTTGTTACCCAAACTCTAAACCA-GCGATGTCAGAAACCTGCCTGATAAGTATTCCCAGGTAGATTTTCTAACTACCTCCCCCACTGGTTACCATCATCATTGCTTACATACTTCCAGAACTCCCTCATAGCACATTGACTATATTTGGAAGAACTAATTGGTGGTTC---TGGTGTCTTTGTTAGGAAAAAGTGACACTTTTTGAAGTTAATAAAAATCTCTTCAGCTACAGCCTTTTATCAGATGTAACAAAACATTGTTTGAACAAATATGTTCTCAGTAGTAGTGACAGTTCCTTTCTGCTTTTCCTAGCCATCAACATCTTAGGAAAGAAAATGGTAGAAGTTCCTTAATGACATAAAATTAGTTTTTGAATAATGGCAGCTCCTGATAGAATATTGCTTTTCAAATCAAGAACTCAATTAAATTAGGTTCCA---ATTGGATTGCATCAGCATTTTTATATGTCTTTAAGTAACATATTT---TTCATTTGATCTTAAGCAACTTTTAATATCTATTTCAATTCTGTACAAACAT-TTTTTACTATATTAACGGCTCTTA---GAGGAAAGAAGC-----ATATTTATCAAATATCACAATTAAGAAAGTGA--CTCTGTGATTATTCAGGTGTGACATCAGCAAAACTAAAAAG chr4 - 94230402 50624663 50624662 50625532 43604871 43604870 43605740 870 CAAGATTGTTGCCTTTGTGGAGGAATGC---ACATGAAATGCTTCTGAGCTGTTCAAGTGGTGAAATAAATACATGGAACAATGTTTGGTACGTTTTGCTTTTCAAAAGATGTTAGATCTCATAACTATACTCTCTTAAA---AGCTTTTGCTATACACTCAGCAGCACGTTCTGCTTTTTTTGTTAGATTCAT--CTTTTTGGCCTAGTTTTC-----AAACTATATTTTAACT-CTAACTCTTTTCCCTTT---CCTTCTGTTTGCTGAAGCTAGCAATCCCATGCTGAGTAAATAATCTATAGTCCATGATCTACTATCCTATCAGCCTTGTTATCCTGGCTCCAAACCCCAAAATGTTGGATATCTAGCTGGCAAGTATTCCCAGGAAGGCTTCCTAATGACCTTCCCCACTGGTTGCTATCATCATTGCTTATACACAGATAGAACTATCTTGTAATACACCGACTATATTTGGAAAAATTAATTGGGAGTTCTTATGGTGTTTTTGTT-GGGAAAAGTGACA-TTTTTGAAGTTAAGAAAAATATCCCAATTCACTGTCTTTCATTAGGTATAGTAAAACCGTGCTAGATAAAATATATTCCCAGTTGAAATGGTACTTCATTC--------------------------------------------------------------------TCTTTTAATAAAAGCAACTTGGGA-------------TCCAAATCAATCAGCGGATGAGATTA--TTGCAGTCATTTGGCTGCCCTGCCATTTTTA------------AAACACATTTGACTGCATTTA---TAAAGCA---TTTAATATATGCTTAAGTGTAGTGCAAACATACCATTACT-TATTAAATTGTATAACATAATGAAAAAAGCTTTATACATACATTAAATATTAGGAGAATGAAAATGACTCTCTGTAATTGATGAAATGTTATTTCAGCTCAGCTGGGAAG ...:.x::....x..xx....x:.....---.......x:x:.:.::.:..-...::x...x...::.....::.....:....:.::.x:.xx......x......:...x.:.....::x:.x.:.xx.:.x.xx.x.---...:.......:.xx:.:.......:.:.:x........x::x:x.x.x..--..:.......:.x...::-----.....x...:.x....-.x........xx.:...---..:...-......:.......::...x........:..............x.........x..:....:....x.......:..x::...:.....x-:x:....::..x.:..:x...::.............x..::..:....:x....:...........:.:..............:.:..xxx:......x:..::..::...::..............:..:.......x:....---......:......-..:..........-.............x......x..::x.x::..x.:....:..:..:.:..::.....xx..:.x..xx......:...:....x.x.:..::.x...x..:--------------------------------------------------------------------.:...x.....x:...:..:xx..-------------.:........xx.x:x:..x.:....--..x..---...x.::...x:::x........------------x....:....---.x.....:---.x.....---........x.::..x.:.x:x..:.......-::x.....-......xxxx.x.x.---:.x....:....-----.:..x:..:......:.x:.xx.x....:...--......:...:x.x.::...x.:x.....xx.:..:::... 28M3D20M1I88M3D51M2D18M5D16M1D17M3D6M1I90M1I144M3I13M1D13M1D101M68D24M13D26M2D5M3I23M12D10M3I8M3D7M3D31M1I8M1D15M3I12M5I32M2I41M 600/847 70.8% 870/94230402 0.0% 144/847 17.0% 126944944 63269611 +7828 chr4 + 190214555 177579783 177579782 177580246 464 GGAGCTGTTTCCTAAAAACGCCCTGAAGATGGCACAATAAGTACATTTTGGTGCAAATATTACT-------------------AAAGAAGTTGTAAGAAAAATATA------TTTGAGG-----TTAAAACACTAAATTTAAAA--------CAAGCCTTTTGTAAGTTTGTGGAAAAGAAATAGTTTCTGAGCCTTTTAACCAATGCCCATTGTTTTAATGTTACAGAAGTCATTTGTTTCATTGCAGTTTAAGGAGCACTACAAACAGGTAGCTAGTCAGAAAACTGATATTGTCACATGTTACTGACAAGAGTCAGGTTAGTTCATGTTGCACAGTTTTATCAATAAATTTACCCTTGTAATTGTAAAACAGCTGATAAGCTCATCTGTTATCTTCTG-------------------------CATAATGTACAATCTGTATCTAAATGCCAGTTTTTATTAGG--CATTATGGGGATAAGGACTAGCAGAGAGAAAAGTTGAA---AAATATCTGTTTTATTAAAATA chr4 - 94230402 50632577 50632576 50633072 43597331 43597330 43597826 496 GAAACTTTATTCTGAAAATGTCCTGAAGATGGCACAATAGGCACATGCTGCTGTATGGCTTGCTGGCGGTCATGCCGTGCAACAAGAGAATTTTCTCTAAAATATGAATCCCTTGGAGGAGCTCTTCAAAAAACAGACTAAAAAGCGAAATGTAAACCTTTT--------------------TAGGTGC--AGTCTATCAATAAAAAAAAATCTTACAAGTGGGCCACAAGCTGTTAATTTCATACTTCCTTGAAGGTTAATATAAACGAGTGAGCAGATAGGGAGTAGTCATGGTCAGGTGTTCTCGGCAAGAATGAGTTTAAATTGTGTTAT---TTTTTATCAACATATTT-CCTTTTCAGTTGTAAAACAATTGATAACCTCATCTGTTATCTCCAGGaaaaagaaaaagaaaaaagaaaaaaaaaaTATTTAATCCACATCTAAATGCCAGTCTTTATGAGGCTCACTAT---------GACTTTGGGAGAGAAAAGATTACTTTCAATCTGTATTTT-TTAAAATa .:.:..x.x.:..:....:.:..................:.:....x:..x..:.x:xx..:..-------------------..:::.:..x.xxxx.......:------..x....-----..x...x.x:.:.:.x....--------:..:......--------------------...x.x.--..:..x.:..:x..x:xxx..:x.x:x.:..xxx..x...:::..x:......xx:xx:..:.:.:x:.x..:....::..::x:..x:..::.::x.x:..x....x:....x::.:.....:.x..x...:x.::....::---x.........:.x....-..:..x:.:..........::......x..............:.x.-------------------------x.x...:.x:....:::..............:.....x...--..:...---------....xxx:..........x.x.x---x...x.x.:....-........ 64M19I23M6I7M5I20M8I10M20D7M2D143M3D17M1D46M25I41M2I6M9D23M3I13M1D8M 284/428 66.4% 496/94230402 0.0% 104/428 24.3% 126947206 63267349 +3614 chr4 + 190214555 177600383 177600382 177600454 72 CTGCAACCTCCTCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTAGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xxxx..:...........:.x...x.xx.x.........:.........:.:.:....x.... 72M 53/72 73.6% 72/94230402 0.0% 0/72 0.0% 159403257 30811298 +17543 chr4 + 190214555 177604956 177604955 177605653 698 CTCATTAGATTTATTTAGTGTTCTGTCACTCTTACATTTTTGGAGATTTTCCTAATAAGAT-ATGTATATTTTGGCATCCAACCTCTCAATATCTTGCATGGTATTTAATATTGATATAGATATTCCTTTTTGTTA----------TCCTGGAGTTTGAAAATGCCAGCTTGTGGTATGTCCTTTGTA--TATTATGAA--TTAAAATATTT--GCCATTCTTTAAAATACCATGTTATCCATGATTCATCTTTTATTAACATTAAATCCACAGACTGCCATAAGCATAGTCTTATCACAGTTTCTTCTCACCTAAGTATTT-AACAATATAAATCAATGTGTTAGACGTTCTTTCATGTGCTACTAGGGAAAAATAACTGGCTTTT--AAATGATTTTTAGTTGTAATTATAACAATAGCTACAGTTCTTCTCCTGATGGCTTTTTTTCCCAGGTGGCCTATTTTTATCCTGACATTTTTGTCCATCCTATGAATTTCATCATAGGGAAGGAACAGCAGTTTGTCTTAGAGCAGCTCAATTTCAATCTCCAGGTGACAAGCTGATATTTCTTTCCT-TTGAAGAAGCTTTTAATATGATGGGTTAAATGTCAAGGAAGAAAAAAACCATCATATATTGAACCTTGATAACCTCATTTCTCTTAACA-TATTGACAT-TTGAT------TTTTAAAAAATGTTCTATTTTTTAACAGATGTCAAGAT chr4 - 94230402 50647341 50647340 50648007 43582396 43582395 43583062 667 CTCATAAAAATTATTCAGCAGTCTTTCAATGTCA----------AATTGTCCTACTAAGATTACCTGTGATTTGGCAATCACCTTAAC-------TGCTCAGTATTTCATAGAGCTATAGTATTTCTTCTTTGCTCGTAATGTTGTTTCAGAAATCAGAAAATAAGTTTTTAAGCTTGGTGATTTGAAAATATTATCTACCTTAAAAAATTGAGGCTGTTTTCT----TCCCAGGGAATCTA-------------------ATGAACTACACAGAA---CAGGAG-ACTGTACCTTCAATAATACTTTTCATT---GTGTTTCAAGAGGAGACTTGAATGCATGGACATTTCTGTCACATATTATTCCTGGGCAGCAACTGGATTCTCTAGATTATTTT-GGCAGTAACAGTAACAATGGCTATATTTCTTTT---GATG---TTTTCTCCCAGATAGTTTATTTTTATCTTGACATTTT-GCCCATCCTGTGAATTTCGTCACGGGAAAGCAACAGCAGTTTGTCTCAGAGCAGTTCAATTTCAATCTCTAGGTGACAAGTTGATATTTCTTTCCTCTTGAAGAAGCTTTTAATATGATGTGTTAAATGTCAAG---GAAACTCTTCAATATATATTGAACTTTACTAACCTTATTCCTCTTAATATTAATGACATATTGACAGCATGTTTTGAAAAATGAAC--ACTTCTCACAGATGTCAGGAT .....x.:.x.....:..::x...x...x.x.:.----------:...x.....x......-.:x.:.:x.......x:..x.:.xx.-------...x::......x...xx.x.....xxx...:.:....:.x----------.:.x.:.:.:x......:xxxx:..:x.x.xx..xx....x.--......xx.--......x...x--..::..:.:.----.x...x.xx...:.-------------------..x..x.x......x---..x:..-.:x..x::x...xx:x.x...:...::---..:...-..x.:x.x.xx.x....::.x::xxx....x...::.::..:.xxx.::x.::......x..:.--.:..x.....-:.:x....:x:.......:....:.x.....:.---....---....:......:.:.::..........:.........-.:.......:........:...::..:...x...............:.......:..............:..........:...............-.......................x.............---....xxxx:..x:...........:..:x......:...:.......:.-..x......-....:------....:.......xx.--x:..:.x..........:... 34M10D17M1I26M7D41M10I42M2I9M2I11M2I10M4D14M19D15M3D6M1D27M3D6M1I64M2I10M1D33M3D4M3D37M1D96M1I37M3D49M1I9M1I5M6I15M2D21M 461/638 72.3% 667/94230402 0.0% 89/638 13.9% 126957615 63256940 +3025 chr4 + 190214555 177645812 177645811 177645863 52 ATATATATATATATATATATATATACACACACACACATATATATGTATGTAT chr4 - 94230402 38535895 38535894 38535946 55694457 55694456 55694508 52 ATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCAT .......:.:.::..:..:x:x.......:........:.:........:.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 139109917 51104638 +30173 chr4 + 190214555 177646215 177646214 177647688 1474 GTATTGTATCTAATGGTAAAATGGCAGAATAGAAGATATTGTTAATTTTAACAAAATTAACTTT---GTGCTTTGTGAGTGTTTTATATTTC-TTTATATATTTGCCCCAGGATATTTCTAGATGAAACAAATTACCTCATCTGCAGTCAAGA-AGGATGGACTC--TGAGCATCA----CCTGGCAGTCCTATTGGT-TGAGATTAAATAGCTCAGCAGTGTTTCTGAAAAACAT-TAGATGCTCCCTT-GGGCAC--ATTTTGAATTTCTACTTTTTGATTTTTAAAATATATGTAAACATAAGCATGTTGA-----TTATAAAAATACCTCTGAACTCATCTTAATGTTACTGCATATAAATTATTTTTAAATCAGGTGTTCAA---AACATTTACTGGC-CAGAGACAGTGC---TTGTGCTTAAAATCATGTTTGTGCATACAAATTAAAAGTATCCAGAAGAAGCAATAATAAGAGTACACTTCTCATTTAACACCAAAGTCTCTTCTGCCTTGCTCGATTAATTGTCACTGAATGCAATTTTATCATAGTTAAAATGAATTCAGGTCTATTTCCAGGTAGTAATA-------ATTTTGGGGGGGTTATAGAAATTAATGTTCCTCAAAAACTAATTAATAATTTCTAAAGAATCATTTGCATAAAGGATGTTCGAGTCTTGTGGCCATCATGTGTTGTATGTAACTAATTCACAGGTCCATTTTCATTACTGCATGTAGCTATGAGGTGACAGGCGTGACCACTCCAAATGGCCAAGCAAAAGGCCAACT--GATTGAGCAATCATTTAG--------CAGCAGTTCATCCAATGATCACATTGTGTTTT--TCAGTAAGGTCTGTCAACAAAATAAAGAAAAGAAGGGCAGGAGGAAGGGAAGTCCACCAAAAT-AGTGGTGATGTTGTTTGAACTTAGGCTTTTCTCTACCATAAA------CTTAT----------------TGTTCTTGAGCCTGGTTCATTTCTGCATTTTAACAGTGTACTATGCATTAAGATGAAGTCTTGATCTCACCATAA-----------------ACCTG-----TATGGAAACAGGTTCATTATATAACACATATTTTTATATTAGCAGAAATAACT-------------------------------------TTCCAACTTTTCAT--------------TTGTTTTGATG------------------------TCAATGTA-------TTATAAGAAACTCTTGCCTAGAAGTAGAGCTATTGTGTTGCTCTGCTGAAAATTACTGTGTATAACAGTTTTAATATATTAAATTTGTTTGACTTATTGGTAGAGCCCACCAAATAAGGACCATGCAAGAGAGCATAATTCTTAGCAGACAGAAGATCCATTCACTATTTCTACTATAATTACAGTGAAAACATTATTGATAAATCAAACCAAAATAATTATTCTTTGAAAAGGAAAGGATATTTGTAGCTTTCTAATGCC-ACGAAAGATGCTGAGTGTAAAAT--GTTCACTTGCTCACTCTCAAATGTGCTGGGACAATCCAGAAATATCAAATGCAA----------CTTTCCACATCATTTCCTCCACCAAACTTCATTTCCACCATCAACAGT chr4 - 94230402 50650870 50650869 50652447 43577956 43577955 43579533 1578 GTGTTCCATTTAATGTGAGAATGATGGAGGGGAAGGCACTGTCAATTTTAATAAAATTAACTTTTTAGTGTTACTTCAGTGCTTTATAATAAGTTTATATGATGCCCAAAGGGCAGCTGTGTGTGTACTGAAGTGTCTTGATCACTGTTTTGTTAGGGTAGAATCACTCAGCTTTATTTTCCTTCTTTTCTTAATAGCCTGAACTCAAGCTGTTTTGTAGCTGCCCTATGATACAAATAGATGCATTCTCAGGGCACTGATTATGA---------TTTTTATGTTTTAGAAATACAGTTCTACAATCGTGTTGGAGCGGGTATAAA------TCTAAACAA---TTGATATCTGTGC--------CAGTTTCCAATCAAG-GTGCAAGAAAAAATATTCTGGAGCAAAGAGAACTTATATTTTTCTTAAAATACTATTTTTGCATACTAATTAGTTGTAACCATGGGAAGCAGTATTAACAGTATACTTTTCATTTTAAACCAGGCTCTCTTGTGCTCCACTTGATTAATTGTCACAGAGTGTAATTTTATCATAGTTAAAACTAATTCAGGCCCATTTCCCTATAGTAATATATATATATTTTGGATGGG----AGAAATTAATATTCCTCAAAAACTAATTAATGATCTCCAAAGAATCATTTGTGTAAAGGCTGTTAGAGTTTTACAGCAATTATGCATTGTATGTAACTCATTAAAAGGTCCGTTTTCATTACTGGATTTAGCAATGAGGTGACAGGCGTAACCATTCCAAATGGCCAGGCAAAATGCAAAGTGAGACTGGGAAATCCTTCAGTCTAAAGCCATCAGTGTACCCAA-------ATTATTTCTTCATCACGAAACTCT--------AAGGAAAAAAAAAAGG------------------CTCTGAAATGAACAATGGGGTCATTTGAAGGTTACCTCCTCTCTGATAAAAAGCGTGGCATATTCCATTCGAAAGAGGATGCTTCTGA---TAGTACCTTGAGGAGCCCTGATAGTGGCC--TGGATTGTGTTACACTCATCCTCACTCCATAATATCTCCATCAACAGTCACTTGAGGCCTCCTGAAACA----CAGGATGCTAAACAATATTGGAAAATGGCGGAGGCAGCCCCTGATGGGTTGTAGGGCTACGAGACTCCATAGCAAGTGCAAATGTTTCACATCTGTGTCAGTCATTCTTCTGATGAAGAGTGATAGTTTGCATAAAGTTTTAAAGTGATAGTTCTCATAAAAAA--CTGGCTCAGAAAATGGCCTATCATTCTATTGCACTGAAAGTGACTGCGCATCACAAATTTTA-ATGTTTCATTTGTCTGAGACATCATTAAAGCCCACCAGGCTAGCTGTGCACAAGGCAGCATAACTCATGGCAGACAAAAGATCCATTCATTATTCCTGCCATAATTACAGAAAGAGCATTATTGATAAATCAAACACAAATAATAATTCTTTTGACAAAATGCAGTGTTTGTGTCTTTCTAACAAAGGAGGAAGAGACTGTATGCAAAATCAGT---CTTTCCCA-TCTCATGTTTGTTGGGAC--TTCTGGAACACAGAACAAAAACATTCTTGCCTTTTCCCTGTATTTCACACA-TATATTTCATCTCAGGCAATATCAGT ..:..x:..:.....xx.:....:::..:x:....::.:...:........:............---...:.x:x.x....:......x.xx-.......:x.xx..xx...::.x:.x.:x:..x.x::..x.::..::x:::.x..:xx.x-...:.:..x..--.x...x.:.----...xx:xx..:..x.:.:-...:x.:..::x.:.:x.:..:xx::..:x:.x...x-.......x::..:-......--...x...---------....x..x...x.:.x...::xxxx:.:..x.:.....:-----x......------...:...xx---..:..:.:xx...--------:.x...:x.....:.-..x...---..x..x.x....x-..:...x.::x:---..x.x........xx.:...x.......x.....:xx...x...x::......:..x...x....:....:......x.x....::x......x...::::..:.............x..:..:...................:x........:.:......xx:........-------.......:x...----..........:....................:..:..:.............::......x....x....:..:::..x..:...::............x...x.x......:............x..x....x................:....:............:......x..x..x.--..:..:.x....x..:..--------..x....x:.:....-------...:.x.:..--...xx..:x...--------..x:..:....:....------------------.x.::....-.::::..:x..::......xx.x:x..::.....:x:.x...------.x...----------------..:.::...---.:..x.x..xxx.x::::.:.:....xx.--..x...:x.x.:x.x..x.xx..x.x......-----------------..:..-----.x:x......----..xx..::x.x...xxx..xx.x.x.:..:..:::.:.:-------------------------------------.x.x..:x.....:--------------..x..:.....------------------------.:..x..:-------.:....:...--..x..::....:xx.:x....::.x:.::.x::......:.x....:.:..x...:x...x.-..:..xx......:...xx:..::x..:.........:::x..xxx::::....:x.......:..x.:.......:............:....:..:.:..........x:.:.:...................xx.......x.......x:.x.::.x:x::.:.....:x........::xx-:x.:....x:...x:..:.....--..---...x.:..-.....x:.x..:......--.:.x.:..:.:x:..::x..----------....:.x.xx:.....x:x..-:.x.:.....:..x:x..x:.x.... 64M3I25M1I60M1I11M2I9M4I18M1I37M1I13M1I6M2I7M9D39M5I7M6D9M3D13M8D15M1D6M3I13M1I12M3I173M7I12M4D182M2I18M8I15M7D10M2I12M8D16M18D9M1I42M6I5M16I9M3D29M2D32M17I5M5I10M4D39M37I14M14I11M24I8M7I10M2D62M1D186M1I23M2I2M3D8M1D18M2D20M10I21M1D26M 948/1391 68.2% 1578/94230402 0.0% 270/1391 19.4% 126995345 63219210 +15668 chr4 + 190214555 177660258 177660257 177660657 400 TTTGCATATCACTTTTATGATCTAACATGGTATATCCAAGCCTGTTCAGAGTTTAACATTAATTTCTAATGGTTCTCTT-TTATAGAATTTAACTTGTGAATTTATTAAAATATACTAAACTTGCTCACCCTCAGGGTATGTGAGAATGAGCTTCTGCATTCCTGGGAGCAAATTGCAGATCAGCATTTTTAGTGCTGCCTAAGACCC----------------------TTTGTGTGTGTGTTTTTTAAAATTACCAACATAGATCAAGTTTATGTTAATTGTATGAAAAAGCAACAGAAATAATCAGTAACATTTACACAACTTTAAGTAGTTAACCTAGTTCTGAGGCAGCAGAATTATTAAATAGTCAGCACCTTAAAGTAGGCAAAACA-TGTAATGAAGCATTTCTTTCTACTAGCGT chr4 - 94230402 50659068 50659067 50659473 43570930 43570929 43571335 406 TTCGCCAATCACTT--ACAAAACAGTACAGTACAACCAACTCCATTTAGA------CATTAACTGCTAATGGTTTCCTTCTTACAGATTCTAAATGGTGGATTTATTGAATCACACTAAGCTTGCTCCTCCAGGGGGTATGTAAGAACAAGCTTTTGTATCCTTAGAAACAAACTGCAAATCAGCAGTTTTAATGCTGCCTAAGGTCCACTGTTGTTGGTTGGCTGGATTTTTTTTCCTGTGTTTT----AATTACTAACATACATCAACTCTATGTTAATAGTATGAA-----AACAGAAATATTCAGTAATGTTTAAGGGACTAAAAGTAGTTAACCTAATTCT-AAGCTGCAAAATATTAGAAGAGTCAGCATGTTAAAGGAGGTGCAAAATTATAATGGGACTTTTGCCTTTACTAGTGT ..:..xx.......--.::.xx:.::.::...:.x....x:.::..:...------......:.x.........::...-...:...x.:...x.x...:.......:..x:.:.....:.......x:..xx:........:....::.....:..:..:.:.:.:.:....:....:.......x.....:...........::..----------------------...x.x:x........----......:......x.....x.:.........x.......-----..........x.......::....x:x:...xx..............:....-.:..x...:...xx.x:..x........:x......x...::x..x.-.:.....:::.x...x::.:......:.. 14M2D34M6D23M1I128M22I16M4D39M5D52M1D47M1I29M 283/382 74.1% 406/94230402 0.0% 42/382 11.0% 127001190 63213365 +3093 chr4 + 190214555 177675028 177675027 177675084 57 TCCTTGAGGTTCTGTTTTTTTTTGTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGA chr4 - 94230402 71609794 71609793 71609847 22620556 22620555 22620609 54 TTCCTGAG---CTGTTTTTTGTTGTTTCTTGTTTGTTTGTTTGTTTTTTCCTTTAGA .:.:....---.........x.....x:..................x..::..x... 8M3D46M 45/54 83.3% 54/94230402 0.0% 3/54 5.6% 106065234 84149321 +3301 chr4 + 190214555 177677594 177677593 177677687 94 ATCTTCCTTCCTTCTTTCTCTCTTTGGTTCCTTCCTCTCTTCCTTCCCCTCTTTTTT-TTTTTTTTTTTTTTTTGAAACACAGTCTCTCTCTGCA chr4 - 94230402 8439369 8439368 8439462 85790941 85790940 85791034 94 ATCTTCTGGGTTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCT-TCTCTTCA ......:xxx:....::.:x.x..:x....:::.:.:x.::..:.............-..........:..:..xx..:x:.....-.....x.. 57M1I28M1D8M 64/93 68.8% 94/94230402 0.0% 2/93 2.2% 169238225 20976330 +3022 chr4 + 190214555 177677970 177677969 177678024 55 AATCTTCCTTCCCTCTTTCTTTCCCTCTCTCTCCCTCTCTCTTCTTCCTCTTTTC chr4 - 94230402 91625186 91625185 91625240 2605163 2605162 2605217 55 AATTTTTCTTTTTTTTTCCCTCCCCCCTCTCTCCATCTCACTTTTTCCTTTCTCC ...:..:...:::.:..:.:.:...:........x....x...:.....:.:.:. 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 86052784 NA +3101 chr4 + 190214555 177709300 177709299 177709361 62 GAGCAAAACTCCGTCTCAAAAACAAAACAAACAAACAAAACAACAACAACAACAAAAAAGAA chr4 - 94230402 59458479 59458478 59458540 34771863 34771862 34771924 62 GAAGGAAACCTTATTCTAGAAGAAAACAAAACAAACAAAACAACAACAACAACAAAAGTGGA ..:x:....::::.:::.:..:x...xx.............................:x.:. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 118250821 71963734 +3363 chr4 + 190214555 177709310 177709309 177709358 49 CCGTCTCAAAAACAAAACAAACAAACAAAACAACAACAACAACAAAAAA chr4 - 94230402 37986039 37986038 37986087 56244316 56244315 56244364 49 CCTTTACAAAAAACAAGCAAACAAACAAAACAACAGCAACAACAAAAAA ..x.:x......xx..:..................:............. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 139723271 50491284 +3213 chr4 + 190214555 177709315 177709314 177709398 84 TCAAAAACAAAACAAACAAACAAAACAACAACAACAACAAAAAAGAAATTCTG----AGTCATTAGT-GATCTTACTACTTGGGAGTGT chr4 - 94230402 16389359 16389358 16389447 77840956 77840955 77841044 89 TCATCAACAAAACAAACCAACCAAACAACAACAACAAAAAAAGAAAAAACCTACCACAAACATAAGTGGATCTAAGTATCCAGGTCTGT ...xx............x...x...............x....:.:...x:..:----.:x...x...-.....x.x..::::..xx... 53M4I10M1I21M 63/84 75.0% 89/94230402 0.0% 5/84 6.0% 161319956 28894599 +3203 chr4 + 190214555 177709318 177709317 177709355 38 AAAACAAAACAAACAAACAAAACAACAACAACAACAAA chr4 - 94230402 65284688 65284687 65284725 28945678 28945677 28945715 38 AGAAAAAAACAAACAAACAAAACAACAACAACAACAAA .:..x................................. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 112424630 77789925 +3145 chr4 + 190214555 177724568 177724567 177724617 50 TGTTTGTGTGTTTGTTTGTTTGTTTTTTTGGTTTTTTTTTGAGACGGAGT chr4 - 94230402 67783534 67783533 67783583 26446820 26446819 26446869 50 TGTGTGTGTGTGTGTTTGTTGGGTTTTTTGGTTTTTTTTTGTGGTGAGGT ...x.......x........x.x..................x.::.::.. 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 109941034 80273521 +3082 chr4 + 190214555 177737977 177737976 177738065 89 AAGCCATATATGTATGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTAT----AGAGAGAGAGAGAGAGAAACAATGTTACACATGGTAGCTG chr4 - 94230402 33398798 33398797 33398888 60831515 60831514 60831605 91 AGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATA--GATAtgtatgggaactg .::.......x:.:.:.x.:x.x:....:........:.:::::.:...----.............x...:.:.--.x..:::....x.:... 49M4I21M2D17M 59/87 67.8% 91/94230402 0.0% 6/87 6.9% 144339179 45875376 +6267 chr4 + 190214555 177770245 177770244 177770535 291 CTCCAATCTCATTTCCACTTCTTAATGGACTCCAGTCAATGTCTTGGTACTAAAAGCCTGTCACTACTTTC-----ACTCTGGCCTTTTTATACTTTTTCATTTGCTTGTT----TTATGGTATAGTTGCTCTTT-TTTGTCAAGTGGTTTATAATATATTCTTCCAAGTGCCAAAGTTTACAATCTAAAACATCTATAACTTCACTTCATAATGACTTTCTACTACTATGTTTCTCA------TATATTACTTTTTGGAATAGCTAACAGAAATATGCATTTGATATAATTTCTATTTTTTTTGCT chr4 - 94230402 50693632 50693631 50693932 43536471 43536470 43536771 301 CTCCAATCTCATTACTGCG-CTTAATGTACTCCCGGCTTTGCCTAGGTAATAAAAATCT-CCACCGTCGTCTTAGTACTTTGGCCTCTTCATACTTT--CATTTGCTCAGTCAGTTTATAGTCTACTTGCCCTTTCTTTGTTGAA-GAATTATAATAGGTTTCTGTAACTACAATAGTTTGCACTTTGGAATGTCTTCAGTCTCAGCCCATAAGGAC-TTCAGCTGATATAGTTTCCACCTGGGCCTAATAGTTGTAAGTAGATCTAATAAAGACACATACTGTTAGCAAAATACATGTCTTCTGCT .............x.::.x-.......x.....x.x.xx..:..x....x.....::..-:...::::x..-----...:......:..:.......--........::x.----....:..x..x....:....-.....::.:-.:x........x:..::.x:..x.:.x.x.....:..x.:.::..::...x:.:::...x::.....x...-...x:..:x...:x..::..------:x..x..x..x.x:.x.x.x....:.:.:.:.:::.:.xxxx::..xx.x:..x.:..:.... 19M1D39M1D11M5I21M2D12M4I20M1I9M1D71M1D20M6I63M 185/285 64.9% 301/94230402 0.0% 22/285 7.7% 127076613 63137942 +3070 chr4 + 190214555 177784026 177784025 177784097 72 AACAAACCTGCACATTGTGCACATGTACCCTAGAACTTAAAGTATAATAATAATAATAAAAAGAATTTAACT chr4 - 94230402 47746592 47746591 47746663 46483740 46483739 46483811 72 AACAAAACAGCATATTGCCGATACTGTTCCAGAAATTTAGGGGAGAATAATAATAATAAAAAAGATTTAACT ......x.x...:....:xx.:.:xxx:..x::..:...::.x.x.................::........ 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 130037434 60177121 +22254 chr4 + 190214555 177802076 177802075 177802873 798 AGATAGGACACTACCTATTGTATATATTTCCAGAAATAATCTAACCATGATCTGATCAAATTTTTATAAAACAGATAATGGTTTACATTTTCTCAAGTATCACAGCAGTTAATTTTAATTTCTGTGATATCATCCTGCTTTACACTGCCTTTCATGTCAGAATGAATCCCTATTTCCTGAAAATATCCTGCAGCTTACACTGACTCTTCTGCAATGAATCATGCCTGCAGCCTA--AGTACTTGGTGCCTCATGATGGGGGCATATTATGTTCAATAACGACATGAGCTGACAAATGTGAGG----------ATTTGTTTTAAC--TGTCACATCAGTTAAAGCCTGATTAGATGTCCTTA-TCAAAATACATACTGATAAGACAGCTGTGCTCCACTTTTGTTTTACCAAACCTAGCAAGTATTTTATTTGCAATAAAGAAACTGAAGGGCCATCAAAT-TGTGTAGAGCCATCTGCTTCTGAAATTAGTTTCATACAGGGGATTTAATCCACAGTAATTCTTATCTACTTATGATCTTGGAAATGCATTGTGT-------TCTTTAAGTCTACAATTAACTAC----------GAGCAT----------------CTAATTCTACTCTATCACCTTATATCAAGTGTGTTAGCGCCATTTTC-CAAATGGCA-AAACATGGTAATAACCCAGGACTTATGCATGATA-ATGAATCATATCACAGGGCTCAGTCTGTCTAAAAAAGTACTAGGAACTCTCTA--TGCCTGCTAAGAAGCATATGGAGAAACATGACATATGATCCAGTTTATAAAAGAACAACTTAAAAATTTAATGT----AGTTAAGAGCAGG chr4 - 94230402 50711159 50711158 50711987 43518416 43518415 43519244 829 AGATCTGACAC-----ATACTGCATATCTCTAAAAATAATTTAATCACAGTCTGATCAAAGTTTCATAAAACAGATAGTGCTTTACATTTGCTGGAGGCTTATGACAGTTAATTATAATTTTGATTATACCACCGTGCTTTAGGCTTCTTTATATATCAGAAGGATTCCTTCTCTTATTAGAA-----AGAAGTTTACTTTTATTTGTCTTTGATGAGC--TTCCTCTAGTGTACTGGTACTTTGTGCCTACTCATTTAGGTGCA-TATGTTCAGTAATGACTCCAAGTGACAAATGTAGTGTAAATAATTTTTCTATTTTAATTGTGTTGTATCATTTATAAACTGATAATGTGTGCTTAGTCAAAATATACACAGTTAGGACAACTGCGATCTGCTTTTGTTTTACCAAACCTAGCAAGTATTTTATTTGCAATAAAGAGACTGAAGGGCCAGCAAAGATGTATACAGCCATCTGCTTCTGAAATTAGTTTCATGTTAGGGATTTAAGTCTTGGTGATGCTCTTCTGTGCAGGAAACTGAAAATACTCTTTTTTTGTTTGTTTTTAAGTACATAGTTGAGTATTAAATGTGTAGAGTATTGGTAGCAACAGAGAGCTCACTCT--TGTGTCTCTTCATCTC-AGTTTGTGAGCACTGCTCTCTTATGTGGCACAAATATAGTTACAATTTGGTGCTTTTGCATGAGACATAAATTGCACCACTA--------CTGCTTAGAAAAGAGCT---GACTTCCTGATTAAATAATAAGAAAGCTACTGCCAAATATGATACATAACATGTGTGATAATAGCAGAAAGCAAAATGCTGAGATTGGGAGTTAGGAAAAGG ....xx.....-----..xx.::....:..:.:.......:...:..:::..........x...:............:..x.........x..x:..xx.:.:::.........x......:x:.x...:..:.x.......x:..x.:..x:..:......x..x...:.x.:.:x.x.:..-----x.x..:....x:.x.:.:x...x::....::--.x...x:..:x..--:......x......xx.x..xx:..:::.-........:...:...x:x.:x..........::x.----------x.:.:......:--...:::....x...x.:x.....x.x:...x....-........:.:..x.x..:....:...:.x..::.............................................:............x....x-...:..x............................::x:.........x:.x::..:..x..:x...::x:.x..xx:..:....:.x:.x.x.-------.:.......x:.:.:..:.x..:----------...:..----------------..x.:...--.x.:..x.:.:..x..-...x...x...:.:::.:..-:.x:.....-...:..:..x.:..::::.x:...x.......x.-..:...:::.:...x:--------...::..:.....x:..---:...::..:--.:xx.:x......:xx..:x.xx...:....:.:..:.:x::xx.x....x..x.x..xx:....xx:.:.x:.----.....:..:x... 11M5D167M5D31M2D13M2I29M1D36M10I12M2I35M1I98M1I94M7I23M10I6M16I8M2D16M1D20M1I9M1I34M1I16M8D17M3D9M2I74M4I13M 530/771 68.7% 829/94230402 0.0% 85/771 11.0% 127090917 63123638 +55930 chr4 + 190214555 177809242 177809241 177810688 1447 ATGAATTTCCCCTCCAAGTTATAGTGCTGTAGGTG--TCAACTGCTAAATAAGCTTTAGCACGGGGTAGCAGTTAATTGATGTAATTGATTATTTTTCCTCAATAGAAAACTGCATCTTCTTTATGTACAATCGTATCATGGGGAGAGTTAAGTTTAGACAATTTGAACAAGATGTAATTATCAATT---ATGGATTCCTCTGGGTCCACGGTCATTATTATCTTTTAATGACTTTGTTCCTTTTCATATGATTATTTGGAAATTACATAGTTATTGTTCCCCTTAGTGAATTGCAAAA-ATTTTCTAACACAATGA---CATTCTAATGAAAAAAACAAACCTAGTAAGATACTCGTATCATCCTTTGGATATTTTGACAAAGCATGACTTAAAACAATTCTATGGGGAACAATGAACCAAAATGACACAAGTGTACCACAAAACGATTTCATTTTTGATGTTCCCTGCTAATATTTTTATTGACCTTTTAAGTTTATCTAAGAGCTTTTTAATGCAACAGGCTATGTTAGTAGGGCTGTGTGTGTGTGTATATATATATATATATGTAAACTTTTTTTGCACAATATCATACATTTCAGTCTTTATCACGCTGGGAACAATAAAGTAACAGACTGCAATGCATTAGCATCATAAAGAAAATGTAATAAATGACTTTATAACTGTAGTAAAAGTTGCATGAGCACCAGCAGCTGTACCAGAGATGTTGCTACAGCAGCGCTTTATGACCTAATGGCACTCAGTGGGCTGATAATATTATGTGTGTGTGTGTGATGCCAGCAGTTTCCAAGGCCTAGATTTCAATTC-GATAAATAATTGAAAGCACTTTTAGACTTTCCCATAAAATGTTTAACAAGGGATCAAATCCTCCCTCCCTGTACTAGAAAATTAAATAGTTTTTATGGGAGTATTTTATGATGAAATCCTAACTACTAACTGTGGGAAAAGTGG---------TATTTTTAAACACAGCAGTTGAAAATA----ACTCCTCAAAGAGTTCGTA-TTGCATTGAATTTGATGAACAGTTCTTTCAACTTAAATTTTTCTTCTTTGCTTAAGTTTCTGGCTTTTCAATTTTGAAGCCTGCCTGTAAGAACTGGGTTTTTTGAAAT-----GAACGTGTGGAGGATGGCA-CAGTCATGGAGCACTGTGGACACGAATCAGGAATGCACATAGGCTAG-AGGACTGCAG-TGAGTCAATATTCTGGAAATGACAGAATGGATATTCCTGTGCTGTCAGTGTGCAATTCACCATGGGTTCTTTA--------CGCTGTTAAAGGGGGACAAAGAAGTGAGACTGACTTTTCTCCTCTCTTTAACAGAACACATGAGATGTAAAATGAGTGCTCTGTGAGTGGTTAAAAATTTCTTATAATGTACATACAATCTATGAGATTGGAATTTTATTTAAAATGGAGAAAACAAAAAATATG----TTTCCTTCAAATAAGA chr4 - 94230402 50719422 50719421 50720831 43509572 43509571 43510981 1410 ATGAATTTTTATTTGAA-TTATAGTACAGTTTGTGGGTAAGTCTCTAAATGAGCCTTAGCACCAGGTAGCAGTTAATTAAATTAATTGATTGTCT---CTCAAAATAAAA-TGTATTTTCTTAAAACAGAACTATGTTAAAGAGGAAGGTAAATTTAGAAAATTTGAACAAATTGTAATTATCTACTGCTATGCAT--CTCTGGATATGAGGGAATGATTAT-TTTTAATGACTTTTCTCCTTTTCA-GTGATTATTTTGATATTATTTAGTCATCTTTCCTCATAGCATATTGCAAATTATGTTCTTCCACAATGATGACATTATAATTAAGAAAAGAAGTT-------ACATTCATATTACCCTTTGTATATTTTGACAAAGCACAATTAAAAAACTTTCTTCGGGGAACAATAAAATAAATGAAAGAAAATGTCCCACCAAAT-ATTTCCCTTTTGGTATCCCCTGTTAATATTTTTATGAGCCTCTTAAGCTTATCTAAGAGATTTTTAATGCAGCAGGGTATGTTATTAGACTTGTAT-------------------------------TTTTTTGCACAATATCATACATTTCAGTCTTTATCACAGTGGGAACAATAAAATAACAGACCGCAATGCATTAGCATCATAAAGAAAATGTAATAAATGGCTTTATAACTGTAGTAAAAGTTGCATGAGCACCAGCAGCTGTAACAGAAATGTTGCTACAGCAGCATTTTATGACCTAATAGCACTCAGTGGGCTGATAATATTATGTGTGTGTGTGTAATACCAGCAGTTGCCAGGGCTTAGATTTCAATTCAGATAAATAATTGAAAGCACTTTTAGACTTTTCCATAAAATGTTTAATAAGAGATCAAATCCTCGCTCCCTGTAGTGGAAAATTAAATAGTTTTTACAAGGATGTTTTATGATGAAACTCTAACTATTATCTATACGAAGAGGAGATATTGCTTTCTTTTTTAATGTTGTTGTTAGAAATAAAATACGTTTGAAGCAAGCCTTGTTTGCTTCGTCTCTGAATACCAGTAGTAGAGAAT--GGTACTTGCTTTTACCATAGGTTTC---CATTCCA---TTGGAG-------GCAAGAACTATAATAGTAAGAATTACTAAAATACTTTGAATATGATAGTAATCATGTCACAATGTGTCTGCATTTCTGGAATGAGAAAAGGACAGAAGGCCTGCAGAAGGGTCAATCTTTGGGAAATGACGGGATTGGTAATCATATGGTATAAATGTGCAATTCAGCTGGAGTTCTCTATCTTCTTTTTTTTTTTTTTTGTGATAAGTA------------TTTTCCAATCTCCTTCACAGAAGAGATGAAATGTGAAATAACTGTGAGATGGGTGGATGAAAGTATCATACAATGTACAGAC------TGAGGTCACGTTTGCACTTAAAGCGCATACAATATGTATTATGCTATTCGTTTTTAAATAGGA ........::x:.:x..-.......:.x..xx...--.x.:::x......:...:.......x:..............:.xx.........:.:.---.....x.x....-..:..:.....x.x::.x..:::.:.:.x:.:.::..x...:......x...........:x..........x.:.---...x..--......:.x::x..xx..x.....-.............x:.........-:.........x..x....:x....:..:x....:.x...::x........x-..x....xx........---....x....x..:....x..:::-------.:.:..:...:.:......x................::.:.x....xxx....x:..........:..x:...xx:.x:x..:...x....x...:-.....x:.....:.:.:.....:............x::...:.....:...........x...........:....x.......x...:x:...:.-------------------------------.....................................:x.............:........:.....................................:...........................................x....:................::.............:.....................................:..:.........x...:...:.............-..............................:...............:...:............x.........x.:...................:::.::.:.............::.......:..x..:.:x...:..x:.---------.x.....x..:::x.:x...::.....----..x::.x..:x.:x:.x.:-....x.:.xx.:...xx.x....xx.xxx:.x.--::.x:..x:.:..xx.x..:.....---.x..:..---...:..-------.:.......:x:x.xx.x::...-----:..:::x.x..:x...::.-:.:.....xx:..x....xx::.:xx..x......x:x.x...x:..-...x......-x.:......x..:x.........:.:..x.:..x..x.:..x.:.x.:...........x.xx.:.....:..--------:x:.x..xxxxx.x..:..:x.------------.....:xx....:..x......x.x....:....:....:.x..:xxx:..:....x.:...:.x..x..:........x..------....:.::x:x..x:.:.....::.x.x.x..:.x:x.x....----.:x::..:.....:.. 17M1D17M2I58M3D12M1D76M3I6M2D24M1D24M1D51M1I17M3I23M7D96M1D96M31D253M1I144M9I27M4I19M1I33M2D25M3D7M3D6M7D23M5I19M1I47M1I10M1I73M8I22M12D82M6D43M4I16M 1023/1366 74.9% 1410/94230402 0.0% 125/1366 9.2% 127089820 63124735 +10740 chr4 + 190214555 177853330 177853329 177853768 439 TCCTAATTACAAGTGGGCA-GGCAGCCATGAGTGCAGGCTGGAAGAC------------CTGGTGAGCGGCAGGCCAGGGAAAGCATGCGGTGGTGCTGGGGGCACCCGTGCGGGACAGAA-------------CTGGAGCTGACTCTAAGGCTCCAGGGAGCAATGGTAAGCTGCAAAATGGTACTAAGGGAAGC-ACACAGAAAATTACCAGAGAAAGACAGATGGTTGGGATGTCCAAAGCTAAGAAGAAATCTCTAAAATGACTAGTGAGAGGGAAACGGTAGATGGAGTCCCTGAGATAAAAAATAAATAATAAACTAAGTGTCTGCACGAGGCAAAGCAACAGCTAGATGTCA-----CAGTGCCGAATGG--CAGGCAAGTCCTCCAACAGCCTAATTCGTAAGGGTACAGCTGCCAAGGAGGGTCAAACCAAAGTAAACTCTCAAACCTAAGTATTACC--AGTTAG chr4 - 94230402 50729681 50729680 50730139 43500264 43500263 43500722 459 TCCTGATTAAAATGGAGCCCGATATCCATGAGTATAGGCTAGAAGGCTAGTGATGCAGACCAATGAGCTGGATGCCACTGAT-GTGTGGCGTGAAGCTGGAGGCACCAGCGTGAGACATAAGGAAGACAGTTTTATGGTATAGCCTAGGAGGCTCCAGGGGGTGATGATATGCTAGAAAATGTTACCAGAGCACTCTAGTCTGAAAATTACTAGAGGAAGACAGATGGATGGGATGACCGACACAGGACAGAAATCTGTAGAATGGCTGATTGGAGAGAACTGGAAGGCTGAGTCTATCTGGAAAAA----------AAGCCAAGCGTGGAAGCCCACTGGAGCAAAAGCCAAGTGCTAAGAATCATTAAAGCATGGTACAGGTGGGCTTTCCAAAAGCCTGATTAGC-AGAGCACAGCGT---GAGTGGGTC-AGCCAAAGTAAACTTTGAAACCTAAATATCACTCAAGTTAG ....:....x..xx.:..x-.::.x........::.....:....:.------------.:::.....x.x.x....xx..x-.::..xx...:x.....:......x.:.:.:....x..-------------x...x::x.x..xx:...........:.::...:..x...:x......x...:.::.x.xx.-.xx.x.........:....:...........x.......x..:.x:.x:::x........x..:....:..::.x:...:...x:..x..::x.....:x.xx.:x....----------..:.:...:..xx:x:.xx:x:::.....x...:.::..::.-----..x.:xx.x....--....:::.:::.....x.....:...x.:-..:.:.....xx---::.x.....-.:............:.x........:...:..:--...... 19M1I27M12I23M1D38M13I62M1I110M10D42M5I13M2I29M1D12M3D9M1D33M2I6M 282/423 66.7% 459/94230402 0.0% 52/423 12.3% 127123649 63090906 +3024 chr4 + 190214555 177870295 177870294 177870353 59 AATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAACAAAAAACAAAA chr4 - 94230402 70150586 70150585 70150644 24079759 24079758 24079817 59 AATTTAAGGCAAAAATAACAAAAACAAAGCAAAAAAACCCACAAAAACACAGAAAAAAA ...:.:.::x.....x..x.....x...:x...........x.......x.:..x.... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 107719709 82494846 +3126 chr4 + 190214555 177870308 177870307 177870355 48 AAAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAACAAAAAACAAAAAA chr4 - 94230402 2725163 2725162 2725210 91505193 91505192 91505240 48 AACAAAAAAAAAAAAACAAAAAAACCCAAAACTCTAAAAAACAAAAGA ..x.............x..............xxx:...........:. 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 175145145 15069410 +3181 chr4 + 190214555 177870309 177870308 177870360 52 AAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAACAAAAAACAAAAAACAAAA chr4 - 94230402 27566391 27566390 27566442 66663961 66663960 66664012 52 AAAAGAAAATAAACAAAAAAAACCCCAAGAACACAAAAAACCAAAACCAGAA ....:....x...x........x.....:..x.........x....x..:.. 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 150303918 39910637 +3090 chr4 + 190214555 177880310 177880309 177880371 62 TGGCTTTTGAGTTTTTGAAGATTCTTTTTAGTTTTCAAAGATTCTTTCTTCAGCTGTGTCTA chr4 - 94230402 89159794 89159793 89159855 5070548 5070547 5070609 62 TGATTCCTAGGTTCTTAAAAATTCTTTTTCATTTTCAAGCATCCTTTCCACAGATCTGTCTA ..::.::.::...:..:..:.........x:.......:x..:.....:x...x.x...... 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 88720516 NA +4026 chr4 + 190214555 177908530 177908529 177908671 142 TATTTTGGTAATATGCATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTGTGTGTGTGTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAAAGTTAGACTTATTTCC chr4 - 94230402 33033649 33033648 33033772 61196631 61196630 61196754 124 TATTTTGGTCAGTTGCA-------ACTTCTAGCTGT---TCTATCTATATCTATGTCTATATAAATATCTATCTCTCTCTCTCTCTCTCtatatatatatctgtatttatatatat--------agacatagatatatTTCC .........x.xx....-------.::.x..x..:.---.x.............:.......xx:.:.x.:.x...............x.:.:.:.:.:.x...:.x.:.:.:.:.--------.:.xx....:x....... 17M7D12M3D77M8D18M 89/124 71.8% 124/94230402 0.0% 18/124 14.5% 144874881 45339674 +3004 chr4 + 190214555 177908585 177908584 177908630 46 TCTATATCTGTGTGTGTGTCTCTCTCTCTCTCTGTGTGTGTGTGTG chr4 - 94230402 19577172 19577171 19577217 74653186 74653185 74653231 46 TCTATTCCTAAGTGTTTTTCTCTCTCTCTTTCTGTGTGTGTGTATG .....x:..:x....x.x...........:.............:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 158331413 31883142 +3118 chr4 + 190214555 177934250 177934249 177934288 39 TTAAAAAAAAAAAAAAAAAAAAAAAAAAGTATTTTGTCT chr4 - 94230402 27993131 27993130 27993169 66237234 66237233 66237272 39 TTAAAAAAAAAGTAGAAAAAAAAAAAAAGTATTTTGTCT ...........:x.:........................ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 149941119 40273436 +3010 chr4 + 190214555 177938042 177938041 177938110 69 ATTTTTCTCCTGATGGTGATATTTTATATATATATGCGTATATATATATATGTGTGTGTGTGTGTGTAT chr4 - 94230402 3186979 3186978 3187047 91043356 91043355 91043424 69 ATTTTTTTCCTGCAATGGAAAATCCATATTTAATTAAGCTTAAATATATATGTGTGTGTGTGTGTGTGT ......:.....xx:xx..x.x.::....x..xx.:x.:x..x........................:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 174751063 15463492 +3716 chr4 + 190214555 177938061 177938060 177938148 88 TATTTTATATATATATGCGTATATATA---TATATGTGTGTGTGTGTGTGTATATGTATATATGTATATGTGTGTGTGTATATATATATAT chr4 - 94230402 70982591 70982590 70982681 23247722 23247721 23247812 91 TATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT .....:..........x::.x:..:..---.x.x.x:x...........:.:.:....:......x:..:x:.......::...:.:.:.. 27M3I61M 62/88 70.5% 91/94230402 0.0% 3/88 3.4% 106955470 83259085 +3023 chr4 + 190214555 177938096 177938095 177938144 49 TGTGTGTGTGTGTATATGTATATATGTATATGTGTGTGTGTATATATAT chr4 - 94230402 66471242 66471241 66471290 27759113 27759112 27759161 49 TGTGTGCGTGTATACATGCATATACACATATGTGTTTGTAAATACATAT ......:....:..:...:.....:::........x...:x...:.... 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 111466854 78747701 +3067 chr4 + 190214555 177945027 177945026 177945082 56 TCTTTTTTCTTTTTTTTTTTTTCAAATTTTCCAATACTTCTTTGTAAAATTAAGTT chr4 - 94230402 31668162 31668161 31668217 62562186 62562185 62562241 56 TCTTTTTTTTTTTTTTTTTTTGCTAAGTTACCTGTACTCCTTCTTAAAATTGACTT ........:............x.x..x..x..x:....:...:x.......:.x.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 146276865 43937690 +23304 chr4 + 190214555 177947294 177947293 177948030 737 TTCATTTTCCATTCCATCTTTAATATTAGCTTTCCCCCAAAAGGCAAGAATAAGTCCTGGAAATTATACTAGACCACTGTACATCTTAATGTTCTTCATGAAATCCATTGTTGGATTTTTCTTTTTTAAATAGAGAGGTTGATATTGATTTCAATATTTGTAG-GAGAAATATATTTAAAAGCTTTTCGGCTATTTGTAACAAACATGATTTC-CTACTTGTGTCACTGTACAATATTGGATGGGAGGCTATTTAATTGTATATAATCCATTAACCCCTTTGATTCTTTTTGTAGTAACTAAAGCT----AGTAGT---AAAAAAAAAATGTAAAATCTGCTTTGATCTGCAGTTATTAACTAGAGGATACTCCAAATTTGGATTTAAAGCCATATATTGTGTAAAGCTACTACTCAATGAAAAATCCTCAATTATCTTAAGAGCTTGTCTTTACCATGCTTTTACATTTACAGTGCTTTCCCCTTCTCCCTTTACAAAATTTCTGCTTCCATAGTGCCGGGATGATTTAAGCAATTATTTATGATGGCATTACCTCATACTCATTTTCTTCTCAG---------CAAAGTTGCATCTA---TGTCAAGACTAAGTAGTGAGAGCCAATTGA---ACTTACTCCCCCTTCTTTGCTATAATCAATAAAATGCATTCCCTTGAGATCACACT-TATTTTTCTCCTTGGATTAGCTGCAGTATTCTTTTACCCTGCAAATAGGAGAA---AAAAAAAAATCAAAAGC chr4 - 94230402 50772411 50772410 50773150 43457253 43457252 43457992 740 TTTCCTTTGCATTTGAGCTTCAAATTTAG-TTTCCAGAGAGAAGAGAGAATAAATCCTGACAACAACAATGG-----TG-AAACTTTAATGGCACTCATTAAAGCCAATGTTTGATTTTTCAACTGTG-----------CTACCTGAAATTCAATTTTTAGACCAAAAAATGCATTTAAAGGCTTTGGGGCCTTTTGTAACAAACACCCTTTCACAAGTTATACTGATCTGCTATGTCGGATGGAAGACTACTTTATGTTGTTTGTTCCATTAGTTCCTTTAATTTCTTTTATGATAGTTGAGCCTTTACAGCAGTTAAAAAAAAAAAATCTAATAGTGGCTTTGATCTTCAGATATCAGCTAGAGGGTACTCCACACTTGGATTTTTAATAATGTACTGCAGGAAGTAACCATCCAGTGAAAAATCCTCAATTACTTTAAAAGCTATCCTTCACCATGCTTTTACATTTACAGG------CCTTTCTCCTTTTTTGAAATTTCAACCTCCATAATACCGAGGTGCTTTAAGTAATTATTTATGACAGCATTACCTCATACTAATTTTCTACTCAGTGCATATACTAGAGTTGCATCTGCTTTGTC-AGAGCAAGAAATGTGATCTAGTTGATACATTTTCTCCCTTTTCTCTGATGTAATTGATGAAGAATGCTCCTCAGGGACAGCAGTGTCTTTCTCTTGTTGCATGGGATGCATTTAACAATTTTTCAGTAAATGCATTAATTGGAACAAAAATCCAAAGC ..:x:...x....:x.x...:..xx....-.....xxx:.:.:.x:.......:.....:x..:x.:.x.:.-----..-.x.::......x:x:....x...x...x....x........xx:.x.:-----------:x.:x.x:.x......x...:x.x-:.:....::.......:.....xx...:x.............:xx....-.x.x..:.::::x.x.:.x..:.:......:..:...:..x..xx.:.x.:x.......:::.....:...::....:.::..::.:.:x..----..:...---...........x...x.x:x..........x...x...:.:.......:.......x.:........xx.::x..:..:..::x:...:x..:.::..:.................::....:....xx:...:.....................x------..:......:...x::.......x:.:......:.:...:.:..x......:............::...............x.......x.....---------:.:..........:---....-...x:...x.:..x..x.:.:....---.:..x.....::....:..x.:....::..:..:x::::...::x.:..:x:..x.-.x...:...:x...x..x:.x....x.xxx.xx..x::.x.:....:x:xx..---:..x.......x..... 29M1D42M5D2M1D48M11D24M1I49M1I92M4I6M3I156M6D95M9I14M3I4M1D25M3I56M1I53M3I17M 492/712 69.1% 740/94230402 0.0% 53/712 7.4% 127174883 63039672 +25794 chr4 + 190214555 177960409 177960408 177961063 655 TCATTTACATTAGAATGTATCTTCTGAGGAAATTGGTTCTTC----ATCTTTTGCTAGTTTGTTTTGTCTTGCAATCACGTTCCTTACTCTTTTCTTTTTTACAGT-TTGCCAAAGACAAAATTTTCAAGGGGCATAGTATAGGGAAAAGGGGAAACAAAAAGAAATACAATATAACTAAATTAAGTGCTTTAAATTCCAGTGGGAAAATAAAAATGATTTGTGTTAAAGGTTAAATAGTCCCTAAACCATAATGTTACAAGTGTTACAGGAATGATGTTTCTATATTCTTGTGCAATGCACCATCAATCTACAGCCAAATACCACTGACATTGTATTTTCTTTTTTTATCTCTGCAGAAC---ATTTGGATACCACTTACCTCTGAGACAGTTCTTTTGGAAATTATAAATATATTTCTTTCCGGGGATCAAAAGAATCCACATCAACATGAAAGATGAAGTGTTGAATCTGAATTCACAGCTGCTTTATGCAATCTG-GAAAAAGTACGGGATTTCTCATTTTAGTTCAGTT--CTCAAAGCTTTGTAGATAGAGGCCTGAAATGAAATATTTGAATTTTTA----AAAATATTCTTCTTGTCTGGCTGTGTAAATGATTGCAATCAATCAGATTTTCTTTGTTCAAGAAAAAAAACATGAAATTACA chr4 - 94230402 50780173 50780172 50780800 43449603 43449602 43450230 628 TCATTTACACTGAAATCTGT--TCAACTTAAGCTGGTACTCCTAGTGTTCTTTGTATTACCCTTGTGTTTTGCAATCAAGTTCTCCATTC------------CAGTATTGCCAAAGCAAAAAATTGCACTAGTCACAGGAAAACGCA---GGGaaaaaaaattatatata-tatatataaataaaGTGCTTTGAATTCCAGAGGGGAAATAAAAATGATTTGTATTAAAGGTTAAATATTCCCTAAACTGTAATGTTACAAGTTTTACAGGACTGATGTGTCTATATCCTTGTGCAATGCATCATCAATCCACAACCGAATACCACTGACACTGTA-------CATTTATCTCTACAGAACAATATTTGGATACCACTTACCTCTGAGGCAGTTCTTCTGGAAAT------TATATTTCTTTCTTGGGATCAAAAGAAAGCACATCAATATGAGCGATGGAGTCTACAAAGTGAATTTGCAGCTGTTTTATGTAAACTGTGAGAAGGTATAAAATTTCTTGTTGTAATTCATTCTACACAGAGTTTTGAAGATAGCAATCTAA----AAATGTTACAATTGTTACATTACTTTATTGTTCAAACCTACTTGTGCAAAAGATCACAATC------ATTCTTCTTGTGCAA-AGGAAGACTATGACACTATA .........:.::...x.:.--..x:xxx..::....x..:.----:.::....:xxxx::x..x...:.........x....:::.:..------------....-.........xx....x..x..xx:.x..:..x.x.:x.x.---......x....xx.x...:.-....xx.....x.........:........x...:.................:..............x.........::.............x........x......x.......:.............:........:...:..:.............:....-------:x.........:......---........................:........:.......------............:x.............xx........:....:x....:...x.xx..xx......::......:......:..x...-..:..:...::::......::..x..:....x.:--.x..:..:....x......x:::..:.----....:..xx....x...----.xxx....x...xx::..:x:....:...x...::.....------...:.::....x...-.::..:.x:....x.:..:. 20M2D20M4I44M12D4M1I40M3D20M1D165M7D18M3I41M6D88M1I34M2I27M4D17M4I40M6D15M1D20M 468/613 76.3% 628/94230402 0.0% 57/613 9.3% 127180236 63034319 +3084 chr4 + 190214555 177960496 177960495 177960583 88 TTTCTTTTTTACA--------GTTTGCCAAAGACAAAATTTTCAAGGGGCATAGTATAGGGAAAAGGGGAAACAAAAAGAAATACAATATAACTAA chr4 - 94230402 56258660 56258659 56258755 37971648 37971647 37971743 96 TTCCTTTAGTACAAGTTAAATGTTTTATAAAGAAAAAATACTGAAAAAATAAAGGCTTGGGGAAAGGAGAAACAAAAAAAAAGAGAAAACAACTAA ..:....xx....--------....xx:.....x.....x:.x..:::::.x..xx.x...:.....:..........:...x.x..x.:...... 13M8I75M 62/88 70.5% 96/94230402 0.0% 8/88 9.1% 121701836 68512719 +3107 chr4 + 190214555 177969497 177969496 177969547 51 CATTTGACATTATTCAAAGAGGAAAGATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 36328488 36328487 36328538 57901865 57901864 57901915 51 CACTTGACATTTCACAAAAATGAAAAAATCTTTCTTTTTTTTTTTTTTTTT ..:........x:x....:.x....:.x.:...:................. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 141641009 48573546 +3294 chr4 + 190214555 177970800 177970799 177970890 91 CACATATACATGCATGTATGCATATGTATATACATATGCATGCATGTATGCATATGTATATATATACACACATATGCATATGTGCATAAAA chr4 - 94230402 8395787 8395786 8395873 85834530 85834529 85834616 87 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAA----TACACACACACACACACAGACACAAATGAATAAAA ..::.:.::...::..:..:x.:......x........:....x.::..xx.----..:.:.:.:.......:.x:..:.x:..x...... 52M4D35M 58/87 66.7% 87/94230402 0.0% 4/87 4.6% 169575013 20639542 +3653 chr4 + 190214555 177970809 177970808 177970919 111 ATGCATGTATGCATATGTATATACATATGCATGCATGTATGCATATGTATATATATACACACATATGCATATGTGCATAAAATTCTCCTATATG-CACATATACGTATATGT chr4 - 94230402 68558024 68558023 68558124 25672279 25672278 25672379 101 ATGCAT--ATGCACACAGGCATGCATATGCGTGTATATGTGCATATTAGTAAATCTACACTCACATACACATTT--------TTCTCTT-TATGCCATATATACATATATAT ......--.....:.::x::..:.......:..:..:.:.......xx:..x..x.....x..:..:..:..x.--------.....:.-....-..:......:.....:. 6M2D66M8D7M1D4M1I17M 75/100 75.0% 101/94230402 0.0% 12/100 12.0% 109412785 80801770 +18678 chr4 + 190214555 177976434 177976433 177976875 442 GTACTTATTAATGGTTAAGAAAAATACACCCTGCTATGGTTTATTGCCAAATAGCAAAGATGTAAATTACATCTCCGACACTGACATGCCACTACATTATTAACAGGGCCACGGAGGCCATTGAAAGTACACTGTATGCACATTTACAGTAGAGGACATATTAAATGGTAAGCTTTAGTATTTTAGTATATTTAATTTGGCACACTTGTTGCTGTTCTTTGTGAA-TGTTAATCTTT-CAACCAATACAGCAGCATGTCAGTATCTTCATTTGCAGGGTATAATAGGCTTATATCCTGAAACAATAAACTTATAATAGCTTGTCTGTTGCTTGGTGGAGATGTGCGTATTCAGCACG---AAGGTGTTGCATGCCCTATTTTTGCTCAAGGTTCTTTACACATGCCCTTCCTTTCC--TGTCAGGAACACAAGCCACATTTATAAGTTT chr4 - 94230402 50792263 50792262 50792709 43437694 43437693 43438140 447 GCATTCATTAATGGCTGGGAAAAACACACCCTGTCATGGCTTACCACAACCTAACA--GACTTAAATTGCATCCAGGAAGCTGACAGGCCAATGTGTTATTAACTGAGCCACTGAGACCCTTTAAACTGTATTGTATGTAAGTTTATAGCGCAGGGAGTATAGAATTTTAAGCTTGCACATTTTAATGTATTTAATTTGCCTCACTCGGCAGTTTGCTTTGTGAACTGTTAATCTTTTCAACCGATACAGCAAAATGTCACTGTATTCATTTGTGGAGTATAATAGGCTTATATCCTAAAACAATAAAGTTATAATAGCCTGCCCACTGCCTAGTGAAGTCACACAAATTCAGCACGTACAAGGTGTTGTGTGTCCTACTTACCCTCTAGGTTTTTAAAACTTATCTTCTCATATCAATGCCTTGAAAATGAGTAGCACACATTATTTT .:.:.:........:.::......:........::....:...:::.x.xx..:..--..:x......:....:xx..x:......x....x.:::........x.:.....x...:..x..x...x.::.:......:.x:....:..::x...:x:...x:...xx.......xx::......:.:...........x.x....:.x::x.x.x.........-...........-.....:........:x......x.:.x........::.:....................:..........x..........:..:.:::...:.:...:..x::::.:x..........---.........::..:....:..x:x...x.....:..x.x..x.::.:.::.x.x:.--..:.xx...x.::..:x:..:x:..x.x... 56M2D167M1I11M1I119M3I56M2I31M 311/440 70.7% 447/94230402 0.0% 9/440 2.0% 127184171 63030384 +32415 chr4 + 190214555 177981593 177981592 177982302 710 TTTACACCTTCTAAGGTCTTTTGCAGTGCAATTTTGCCAATATTAATTATTCTGAACTTATCCTTGTAATTTGTATTTTTACATCTGCTATATCCTTTTGATTTATTGCTTTGATCTTATTTTAGGTTCAG------CAATAAATTTTGGTTG--AGGTCCTGATCACTCCAGTTAATTTAGTGAACTACAAGATATAAAATTATTTTAAGTAAAATC-TCCTCACATTTTCACCGT----------GGTAGGGGTCAGGGAGAGTTCTTACATGAAATATTTAAGAAACATCTGACTATAACCCAACCAGCATGTGGAGAAATTACAT---TATTTCTTAGACTATTTTAACATCAAA----GCTCTGAAGTGAAGGATAGTCATTAAAAGCCGAATTACTGAAAGCATATCTGGTTAGTGCACTTAAACACATTTCGGCAGACTAAAATAATTTAAAATCTGAAGTGAAGTGTGATCCAGAATCACATATGTCAATTACTATGTTGTCTGTGGTATTAAAAATGCATGCAGCTGGAAGCTTCAATTATATGAGATTTCTGACTTAGAGATGCTTTGAC---TTTTACTTTTTGAAAAAGTCACCTTTTCAGAAATCCAAGGGAAAACATTTGTAAAATGCAT----AGTGCCTTTTCCAATTACCTCTTATTGAAAGACAGAACAACACTAGAGAGTTATAAAAGTGAAC-TGAAAATATGATTTTGT--ATGAAATTTGATTA chr4 - 94230402 50794314 50794313 50795045 43435358 43435357 43436089 732 TTTATATCTTTAAAGGTCTT----AGTGCAATCTTGGAAACATTAACTATTAGGAACTGATTTCTACATCTTGTATTTTTATGTCTGATGTAATGTCTTGATTTATTCCTTTGATATTATTTCAGGTTCAGGTTCAGCAATCAATGCTGGTTTTCAGATCCTTATTATGTGAATGAATTTAGTGAAGTACAAGACATAAAATTATTGTAAGTAAAATCGTTTTCACACTTTCCTTTTTTTTGCTGCAGTTGGGGGTCAGGGAGAGTTCTTAAATAAAATATTTAAGAAATGCCTGACTATAACTCAATGAGAATGTAGAAAAATTGAATATTTTTTTCTTAGACTGTTTTAGCATCAAAAGTTGCAGTGGAGTGGGGAATAGTGATTAAAAGCTGAATTACTGAAAGCAT--CTGGCTTGTGCACTTAAACACATTTCTGTTGAGTGAAATAATTTGAAATCTGAAGTA-----TGATCCAGAATCACATATATCAATTACTATGTTGTCTGCAATATTAAAAAGGTATGCAGTTGGAGG-TTTAATTATATAAGATCTCTG--TTAGAAACCCTTCATCCTTTCTTCCTTTTTAAAAGTGTGGTCTTCTTGGATATTGAATGTAAATAATCCACAGAATGCAGGGAAAGGTTCTCCTCTCATTTGATGCTATTGAAGGCCAGGATAACACTAGAGATTTGCAAAAATTAACTTTAAAATATTGTTGTGCTGAAGGAATTTGATTA ....:.:...:x........----........:...xx..:.....:....xx.....x..:::.::.x:...........::....x.:..x:x.:..........x.......x......:........------....x...x:.....x--..:....x..:.:x:x.:.x...........x.......:...........x...........-.::.....:....x::x.----------.x.:....................x..:..............:::...........:...:x..x....:..:.....:x..---.x...........:.....:.......----..xx..:....::.:.....x.........:................--....:.x...................x.:x..x.:.........:...........:-----..................:...................:::.........x.:......:....:.-..:........:....:....--.....:.:x...::x.---.:..x......:...:x..x::...:.::..x..:x..x.x...xx..::::.:......x----..xx:..::..:x...xxx.x:.......:.x...:.:...........x..::....:.x...-.x.......x:..x..:--.x.:.......... 20M4D107M6I16M2I63M1I18M10I82M3I27M4I47M2D57M5D66M1D21M2D16M3I61M4I64M1I17M2I14M 539/696 77.4% 732/94230402 0.0% 50/696 7.2% 127187279 63027276 +3032 chr4 + 190214555 177986947 177986946 177986996 50 TAGCTACCACTTCTTTTTCTTTTCACTTTTTTCTTTCTTTTTTCTTTTTT chr4 - 94230402 30174492 30174491 30174541 64055862 64055861 64055911 50 TAACTACCACTTCTTCCTCTTCACAGATTATTCTTTTTTTTTTTTTTTTT ..:............::....:x..xx..x......:......:...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 147812455 42402100 +3056 chr4 + 190214555 177992133 177992132 177992191 59 TATATATAAATATAAATATATATATACACATACACACACACACACACACACACACACAC chr4 - 94230402 55098586 55098585 55098644 39131759 39131758 39131817 59 TGTATATATGGATAAATGCATCTAAACACATGCACACTTACACACAGAAACAGACACAC .:......x:x......::..x..x......:.....x:.......x.x...x...... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 122893547 67321008 +3050 chr4 + 190214555 177994731 177994730 177994786 56 ATGACAGAGAAAGACCCACTCCACCTTAAAAAAAAAAAAAAAAAAGAAAAGAAAGA chr4 - 94230402 53895545 53895544 53895600 40334803 40334802 40334858 56 ATGGTAAAGACAAACCCATCCTTCTCTAAGAAGAAAAAAAGGAAAAAAAAGAAAGA ...::.:...x.:.....::.:x.::...:..:.......::...:.......... 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 124099186 66115369 +3110 chr4 + 190214555 177996534 177996533 177996589 56 AGTGTGCATCATAGAACTGTTTTTTTTTTTTTGGTTTTTTTTTTGTTTGTTTTTTT chr4 - 94230402 52254441 52254440 52254496 41975907 41975906 41975962 56 AGTGTGTGATGTAGAATTTTTTTCTCTCTCTCTGTTTTTTTTTTGTTTGTTTGTTT ......::x::.....:.x....:.:.:.:.:x...................x... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 125742093 64472462 +3188 chr4 + 190214555 177996568 177996567 177996615 48 TTTTTTTTTTGTTTGTTTTTTTGTTTTTTTTTTTACCTTTAAGAAGCC chr4 - 94230402 56809519 56809518 56809566 37420837 37420836 37420884 48 TCCTTTATTTGTTTGTTCATTTGTTTTTTTTTTTTCTTTTGAGAAGCC .::...x..........:x...............x.:...:....... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 121187049 69027506 +3491 chr4 + 190214555 178030654 178030653 178030764 111 CAAAAGATAAATTCAGGAAGTCACCATTTTTTATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACACATATATATA chr4 - 94230402 8395767 8395766 8395870 85834533 85834532 85834636 104 CAGAAGA-AAATTCCCCAGGCCA------TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:....-......xxx.:.:..------.x.:.:...:.:.::...x.:..:...x..:....:...::x:...:xx.:.............:.:.x.....x..:x... 7M1D15M6D82M 71/104 68.3% 104/94230402 0.0% 7/104 6.7% 169634887 20579668 +3897 chr4 + 190214555 178030658 178030657 178030769 112 AGATAAATTCAGGAAGTCACCA-----------TTTTTTATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACACATATATATACACAC chr4 - 94230402 88147138 88147137 88147259 6083144 6083143 6083265 122 AAATAGATGTAAAAGGACACTAAACCTTTTTTTTTTTTTTTTTACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATATATAGGGAGAAGCATATATCAACAC .:...:..x:.::.:.x...:.-----------......x.x..:..:..x:x..............:.x.:.:...:.:.............-..:.:...x:x.x.x::......xx.... 22M11I60M1D29M 78/111 70.3% 122/94230402 0.0% 12/111 10.8% 89883520 NA +3046 chr4 + 190214555 178030664 178030663 178030754 91 ATTCAGGAAGTCACCATTTTTTATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACA chr4 - 94230402 54293138 54293137 54293228 39937175 39937174 39937265 91 ATTAAAAAAACCCCAAATGCACATCTATGTATATATGTATGTGTATGGTAGTATGTAAAACAGTACACACCCACGTACACACATATATATA ...x.::..::.x.x.x.x:x:..x...:.......:...:.:...:xxx:...:..x.xxx::......x...::.............:. 91M 58/91 63.7% 91/94230402 0.0% 0/91 0.0% 123737526 66477029 +3051 chr4 + 190214555 178030685 178030684 178030759 75 TATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACACATAT chr4 - 94230402 73121142 73121141 73121216 21109187 21109186 21109261 75 TACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..:...::....x:..:.::x:.....:.:x:..:.....x.:..:.x....x.x........:....x:..x.. 75M 50/75 66.7% 75/94230402 0.0% 0/75 0.0% 104909543 85305012 +3416 chr4 + 190214555 178030685 178030684 178030749 65 TATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATAT chr4 - 94230402 8395801 8395800 8395865 85834538 85834537 85834602 65 TGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT .::...x.:..:...x..:....:...::x..:..xx...................x.....x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 169634884 20579671 +3716 chr4 + 190214555 178030686 178030685 178030755 70 ATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACAC chr4 - 94230402 24136193 24136192 24136262 70094141 70094140 70094210 70 ATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC ..:.::........x...:x.xx.:.x......:.......:...x...x...x..........x..... 70M 54/70 77.1% 70/94230402 0.0% 0/70 0.0% 153894493 36320062 +3005 chr4 + 190214555 178030688 178030687 178030746 59 ATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 14964825 14964824 14964883 79265520 79265519 79265578 59 ATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ....:.x.:::.:.::.:.::.:...:......:.xx........::............ 59M 41/59 69.5% 59/94230402 0.0% 0/59 0.0% 163065863 27148692 +3071 chr4 + 190214555 178030693 178030692 178030759 67 TATATATATATATATATATATATATATATATACACACACACACACACACACACATATATACACATAT chr4 - 94230402 48167038 48167037 48167104 46063299 46063298 46063365 67 TGTATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTAT .:.......xxx:......:......x.:.....::x...::::.x..:......:..:...::... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 129863655 60350900 +3830 chr4 + 190214555 178030697 178030696 178030804 108 TATATATATATATATATATATATATATACACACACACACACACACACACATATATACACATATATATACACACATATATATACACATATACACACACACACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::..::....x:...:.:.....:...x.x:..::x::...:..::...x:.....:x:.....:::x::.:.....x.:..::x:...x.x........:.... 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% 104909595 85304960 +3391 chr4 + 190214555 178030711 178030710 178030819 109 TATATATATATATACACACACACACACACACACACATATATACACATATATATACACAC----ATATATATACACATATACACACACACACATATATATAGTATACATATATA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGA-----CACACATGTATA .:.::..::....x..:.....:.:.....x.x:...:x:....:.::....x::....----....:.:x::.......x.:..:.x....x.x.-----:.:....:.... 59M4I33M5D12M 69/104 66.3% 108/94230402 0.0% 9/104 8.7% 104909609 85304946 +3384 chr4 + 190214555 178030712 178030711 178030777 66 ATATATATATATACACACACACACACACACACACATATATACACATATATATACACACATATATAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT ......:..::..........:...........:..x..x::x..x:.:......xx....:::.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 111125865 79088690 +3051 chr4 + 190214555 178030716 178030715 178030779 64 ATATATATACACACACACACACACACACACATATATACACATATATATACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.....:.x.....x.:.....:...::.:x..:.x::....x.:...::........... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 160509967 29704588 +3193 chr4 + 190214555 178030737 178030736 178030798 62 CACACACACATATATACACATATATATACACACATATATATACACATATACACACACACACA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ..:...x.:::...:.x.::......:....:...:....:.x........x:..:...:.. 62M 44/62 71.0% 62/94230402 0.0% 0/62 0.0% 170434325 19780230 +3038 chr4 + 190214555 178032092 178032091 178032143 52 CAGGAATAGCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGG chr4 - 94230402 81724207 81724206 81724258 12506145 12506144 12506196 52 CAGGGAGAGCTCTTTTTTTTTTTTTTTTAAACCTTTTTTTTTTGTGAGGGAG ....:.x.......:.............xxx::..........x....:.:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 96307885 93906670 +3643 chr4 + 190214555 178032194 178032193 178032260 67 CTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCACGCCTCAGCCTCCCAAGTAGTTGGGACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x..:...........:.x...x..x.x........::.......:...:...... 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 159835068 30379487 +46934 chr4 + 190214555 178066326 178066325 178067266 941 TCATTACATTGTTTTTTAACTAAAATTTTTAAATTTATACATTTTTTATCTATTGATATTATTTTTTATTTTATTTATAAAATACCATGCGTGTC--TTGCAAAGCAAACAATATTACACATGCTGCAAGCAACTTTGGAAACTTTAGTGAGAAGAAGCAAAGCAAGCTGTCAGACACTTCAGTAATTGAATCTCTTTGAGAACTGTCTTGGTTTGTCAGCACTGACTTTCCTGTCAAAAGAAAATAAAATAACTTGGAAATTCATCTGAGATAACTCCAGGGGTATTCTGATAATGCCAAGGCAAGAACACTAAGTGCTTTCTCAGAAGCTGTTTGTAC--TAGGATACCCTCTTCCTAGTATGTA--TAAGTTCATTTTAGCCTTGAGTTTACATTATCTGATGTTGAGGTCTGAGATTTAA-TAATGACCTGTCAAATGGCAGTACATAAG--CCTTCCTTCTGCTATTAGGATGCACACCATCATTGCTTAAATTGCCTAGTATACCCTTTGTCAATTACTTTGTAAGTGCTATCCATCTTTTACTGCTTCCGCACTTGGATTGCTTGTAAAATGTTTAGTGGTTAATTATCCTGGAAGGAAGTCCAACTTATGAAAAACCAGGTAGAAGAAAAAAAT-GTCATAAAATTAATGACTTATTCTCCAGTTCTTATCTGATAAAGCAATGTTAATCAGATCCCTTTGGAAATTTACCCTTGACTACCATTCAGCGCTCTCTATAATCAGCTTCAGAAATTTTCCACTCTGGCTTCTCCCCTTTGGCCCATGCTTTTCTCCAAAGGACTTGAATGTATTAAGAAGAGATTGACAGCTCTCCTAACAACTGCAGACTGTGCTAACACCAGAAGGAAATAAAGGTCTTGAAACTTCT-CTGTACTGAGATC-------AGAAATATCAAACAT---GAACATTTATCCATAAA-TGAAACCAAT chr4 - 94230402 50842192 50842191 50843141 43387262 43387261 43388211 950 TCAGCATTTCATTTTTTATCTTTTATCATTAGACTCCTACAGCTTT--------AAAATGATTTTCCCCCT-----AGAAAATGCAAATCTATTCCTTTGTAGTGAAAACCATATTATACATGCAGCATGTAACTTTCAAAACTTTAGTTACAAGCAGCAAAGCAAGCTGTCAGACATTTCAGTAATTGAATTTCCTTGAGAACTGCCTTGGTTTGTCAGCTCTGACTTTGCTGTCAAAAGAAAAGAAAATAGCCAGGGAATTAATCTAAGATAACACAGGGGGTATTTTGATAATGCCAAGACACAAACATTAAGTGTTTTCTCTGGAGATATTTTTGAGGTAGGATTCCTCCCCTCCAAAATCCAGGCGGGTTCATTTTAGCCTTGAGTCATTATTACCTTGTACAGAGTTCTGAGAATTAACTAATGACCTATCAAACTGCAGTACAAAGGATCCTTTCTTCCTGTATTAAGATGCACAATATCATTGCTTAAAAGGCCCAATATACCCTTTGTCAATTACTTCATAAGTGCAATTCATCTTCTACTGCTTCCGCACTTGGATTGCTTGTAAAATGTTTAGTGGTTAATTATCCTGGAAGGAAGTCCAACTTATGAAAAACCAAGCAGTGGGAAAAAATAGCCATAAAATTAATGACTTATTCTCTGGTCCTTATTTTACAGGAGACTCTTAATCAGAGTCTGTTGGAGCTGCACCTTTGACTAGCACTCTGCTTCCTTTATAATCAGCTTCAGAAGTATTTCATTCAGGGTTTTCCCCTTTGGCCTGCGTTTGCCTCCAAACGACTTGACTGTATTAAGAGGAGATTGACAGCTCTCCTAACAATTGCAGCCAGTCCTCTAGCTAAAGGGAAACAAGGGGCTAGTCACTTTTACTCTATTGGAACCCACCTGGAGTTATATTTAAGGTATAAAATTGTTATCTAAAAATTGAAACTAAT ...x:.:x.::.......x..xxx..:x...:.:.:x....x:...--------:.x..x.....::x::.-----.x.....:.x.xx.xxx..--...:.:x.x....x......:......x...x.:......x:..........x.x...x.....................:..............:..:..........:..............x........x..............x......:.:x..:....x....:.......x.x:........:.............:..x:....:......:......x.:..x.:...x.:x--......x..::.:::.:.:x..x:.--:::...................:xx:....:..x:.::x...x.......x....-.........:.....:x........x.:.--....:....:xx.....:........x:.............xx...:.:.....................::.......x..:......:................................................................................:.:..x:.:.......-.:.......................::..:.....:.x.:.:::x.x.x.........x:.:x.....:x.x:...:.......x..:..x..x::..:.................:.x..:..:..x..x..:............:::.:..x:.......x.......x..........:.......................:.....x.x..x..xxx:.:.:.:.....:..:..x..x.xx....:.-..x..:..::.:.-------..xx....:x..x:.---:..:xx.....:.x...-......:... 46M8D17M5D19M2I243M2I25M2I55M1I29M2I186M1I253M1I13M7I15M3I17M1I10M 718/928 77.4% 950/94230402 0.0% 35/928 3.8% 127224134 62990421 +11915 chr4 + 190214555 178080758 178080757 178081203 446 ATGGCAAAATCAGCTTTGTTTCTTTTTCCTTCAAAATTTTAAGACGATAAAATGAGTGTAGTG--CTATTTAGGC-----------AGTGAAGAAAGAAACAT-TATGTTGAGCTGTACCCTAAAGACATTTCTTTTGTATTATAATGCTTTCTATCCACAGACGTTAGTTGAAAATTGATATAATAGTGTTTCTTGTAAGTCTACCAGAAACAAAACAAAACAAAAAACATTTAAAAAGTAGATTAGATATAATTGTATGTGACAAATGAGCCTGGTAGAACTGTAC--TAAAAACCCATAGGGAATAATTATCTATCAGTGGCACCTGCAGAGGAATTATAAGCAGCTGCAGAATTTGATTTTTGAACAAGAAAATAGAGAAAATTACTGCAAGATTGGTATTAAACATTGAGAAGCTAGACAAC--AGAATAAAATATAGAACGAGAAGAGGAAGTTTTAA chr4 - 94230402 50848958 50848957 50849389 43381014 43381013 43381445 432 ATAACAAAA-CAGTCTTTTTCTTCTCCTTGTTTGGGTTTTAAGA----AAAGTTACAGAACTGAATTATTTTGGCCTAGTACAAAAACTGGAGAGAAAAACGTACAAGT----CTGCATCCTCTAGAAATTCCTTTTATATCACTATGCCTTTTAACCAGACATTTCAGTTTGGAATTGATATAATAATGTTTTTCACAAATCTATCAGAAACAAAA----------AATATTTTTAATTTGGAATATATGTAATTGAATGTAATAAATGAGTCC---ATACCTTTACAGTCAAAACCCTCTGGGAATAATTATCTGTTCCTGGCATGTGCAAAGGAATTTTATACAGTTGCAGAA------TTTTGAACAAAATTACAAAGAAATATCTT---AACTTGAAGGTACACATTAAGAAGTGAGAAGGCAAAGAATATAA-GCAGAATGAGTAGAGAAATTTATAA ..::.....-...::..x..::.:.::::x.:x:::........----...:.x.xx.x.x..--:.....x...-----------.x..:...:.:....:.-:.x..----...:.:...xx...x...:.....:...:.:x....:..:..x...x.x.:x.:....x::.............:.....:.:::..:....:...........----------..:....xx..xx.:..x..x..:......x....:.:.......:.:---.x.x..x...--.x.......x:x..............:.:xx.....:x....:.......x..x:...:.......------..........:.xx.:.:.....xx.x:.---.:x...:x:x..x.....:.....:x...x::.--......x..-::....:...x....:..x..x... 9M1D34M4D15M2I10M11I17M1I5M4D104M10D48M3D10M2I66M6D29M3D33M2I9M1D25M 291/414 70.3% 432/94230402 0.0% 50/414 12.1% 127231800 62982755 +3018 chr4 + 190214555 178086142 178086141 178086241 100 CTTTCATTTCTCCCCCTTTCTCCCCTTTTCCCCCTTTCGTTTCCTTTTCTTTCCTCCTCCCTGTCTCCCTGCCTCTGTCTCTCTTTCTCTTTTTCTTTCT chr4 - 94230402 43081925 43081924 43082024 51148379 51148378 51148478 100 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..x..x:.:..:::.....:.:::..:.:x...:::x:...:.x...:xx...:xxx:::....:..::.x:....x.......x.xx...:........ 100M 59/100 59.0% 100/94230402 0.0% 0/100 0.0% 135004217 55210338 +3673 chr4 + 190214555 178104728 178104727 178104840 113 GTATATATATATATACACACACACACTATATATATACACACACATAAGTACATATATATATGCACATATGTATACATGTATACAT------------------ACATACATATATACACATATTTCTGTGT chr4 - 94230402 73121101 73121100 73121224 21109179 21109178 21109302 124 GTGTGCATGCATATTCATACACA-------TATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAATTTCCTTAT ..:.::..::....x..:.....-------....:...x.x:...:........::....x.:...::x.....::..x:.....------------------...:....:....x:..x.....:x.:. 23M7D55M18I28M 75/106 70.8% 124/94230402 0.0% 25/106 23.6% 104983627 85230928 +4320 chr4 + 190214555 178104760 178104759 178104880 121 TATACACACACATAAGTACATATATATATGCACATATGTATACATGTATACATACATACATATATACACATATTTCTGTGTGTGTGTGTATATATATATATATATATATACACACTATACA chr4 - 94230402 40224604 40224603 40224723 54005680 54005679 54005799 120 TAAACACACAAACTAGCACATGTATAAA-GCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATA ..x.......x.:x..:....:....x.-..xx...:x.......:.:..xx.x:x.::::.xxx:x...x....................:........x...:....::::x.x...:. 28M1D92M 82/120 68.3% 120/94230402 0.0% 1/120 0.8% 137880156 52334399 +3097 chr4 + 190214555 178104769 178104768 178104825 57 ACATAAGTACATATATATATGCACATATGTATACATGTATACATACATACATATATA chr4 - 94230402 53842130 53842129 53842186 40388217 40388216 40388273 57 ACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACA ...:.:x....:..x.:............:.........x.:.x...:.:.:.:.:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 124262639 65951916 +3391 chr4 + 190214555 178104772 178104771 178104897 126 TAAGTACATATATATATGCACATATGTATACATGTATACATACATACATATATACACATATTTCTGTGT--GTGTGTGTATATATATATATATATATATACACACTATACACACACACACACACATAC chr4 - 94230402 42571703 42571702 42571824 51658579 51658578 51658700 122 TAACTACATAAAT---TGTAGATATATATAACTTAAT---TTTAGACTTATTATCCCTTACTTCTGGAAAAGTCTGTGTGCAGACATACACACATGTATACATGGTATACACACACACACACACTTGC ...x......x..---..:.x....:....xx.xx..---.x:.x..x...xxx.x.x..:.....x:x--..x.....::.x.:...:.:.:..:......::x...................x.:. 13M3D21M3D29M2I57M 84/120 70.0% 122/94230402 0.0% 8/120 6.7% 135533069 54681486 +3266 chr4 + 190214555 178104784 178104783 178104855 72 TATATGCACATATGTATACATGTATACATACATACATATATACACATATTTCTGTGTGTGTGTGTATATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:...x.:...x.::.........::........::.:....xx....xxx:x.:.:.......x...... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 125623548 64591007 +3569 chr4 + 190214555 178127394 178127393 178127520 127 AAAACATTGTGTAAGTAATTTTTAAAAA------TCTCTTTCTCCATCCCTAC---TTTTCACTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACTCTGTCATGTCAGAATA------ATGGAAGTAAAA chr4 - 94230402 51342006 51342005 51342145 42888258 42888257 42888397 140 AAAACACTGCATGA--AATGATGAAAAACCTAGTTCTGTTTATCTTTTCATATGTACTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCACCATATCCTATTTCAAAATCTGTAATATGGAATTAAAA ......:..::.:.--...xx.x.....------...x...x..:x.:.x..:---:...x.x.....x..............x..........xx..x..x...xx.x.x::..x...:...x------......x..... 14M2D12M6I19M3I68M6I12M 92/125 73.6% 140/94230402 0.0% 17/125 13.6% 126785388 63429167 +3059 chr4 + 190214555 178171057 178171056 178171105 49 CAAAATTGACAAATGGGATCTAATTCAACTAAAGAGCTTCTGTGCAGCA chr4 - 94230402 41449893 41449892 41449941 52780462 52780461 52780510 49 CAAAATTGACAAATAGGCTGGACCTGAACTAAGGAGCCTCTGTGCAGCA ..............:..x.xx.x:.x......:....:........... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 136721164 53493391 +46961 chr4 + 190214555 178172473 178172472 178174193 1721 TGCCATGATTATAATGGGAGACATTTTGTAATTACACAGTGATTAACAACTATATTTCTATTTTCTT-GCCTGGCTGTCATAAACAGCCCTTTTTGAAGCTG-CACTAATATGAGTATTGAAAAAGAATACTTATGGCTCTTTTGAATATCTAACC-TGTTTTGATTGAAGATTATGCAAATCACTTCTTACAGTCTTATTAAAAGATAACATTTAAGCTGAACACTGAA------CAATTCCAGTTAAAAT--ATAGATCATGGAGTTAGTAGATTCTGCCTTACTGGTT-TCTTGTGCACACTGCTAGGCCATATAAATATTGTATTTGCATTTTATATATTTTATATATCATCTATCTAGGGCCTGCTCT-----CTTCCACTATG--------------ATAATATATGC---GTATATATTTTAATATTTTTGGCAGAATATTTTCATGCAAATTTGAGAGAAATTATAAACATTTCAGTATAGGATCTGGATCCTCAATATAACA----AAGTGTATTAGAACTGTGAGTATAAGACCCTCTGTCAATGTCAGAAGAT-TAGGATTTTGGGTGAGATAAATAATTAAGAA----AATCTTTGTAAACCTAGTGATCTACTTTGTTTGGCTTTCTTACCTTTGTATGAAACAAGGGAAAAATAATACTAACCAAAATATTTA-AATGGAGTTGTCTCAGTGCCTTAA--TCTATTAT--------ATGGTTTTATTTAGAGCTTTGTCAAATTTTATTATAAATTGGA-GGCAACTTAATATATGTATTGATTAACAACGTAAAATACATTTTAGATGTTTTAAGTAAAATCC-TGGGAATTCCTGCTAGATCTTGGTAATATTAAGACATGTCAAAATTAAACTAAAGG-------AGTTAGTGTGTCTGC-GTCCTTCTGGAAAAAAAAATTGAAATGTTTATTTGACTCATGAAAGAAATA---AAATTGTACCAAGTGATGCATGCATTACGCTTTATAAAGAAAGCAGTAGTCCTCAAAAGACAAATCAAAATGAGAAAGAATTTAGGTGATCAAAACAAAAT-CCACTCATACTTGATGCTTGCAGTATTTGTTTTCCATTTGTATTTATTTACAGAGAATTGACTTGCTTCATAAATATAAAATTATGTTCTTGCAAAAAATATCTACATATACAT-----AAGCAAATATCCTTGGAAACAC-GAAGATTGTTTCCAGCAATAACTTTGAACTGAGTAGAGGATCAAAAGGTGCTATGTTTCTGTGGCAGTAAATTTCTGGTCTTAATCTTGTTTTTAAAGCCGA---CTATTATGTTTGTA-ATGCAGATAATTGGGAGTGCGTTA------GGGGACATTCAGACAAGCTGACCATGTTCGCATTTCACTCCTTTGCGAAGGTCTAATATATATGGTTTATCAGAAATGACTTTCCCTGTTTGGAATGTTTCAATGATGAACTATTCTTTCCGAAACTACCCTAGTGCTACGATTTATTTTGAAGGGATTCTCATTAAATTGTGCACTGCTGTATTGAAATACATGATTACAAAAAAAATGCTGACACAAGTATTTTTTCATGTTACTCTTTAAGTTGGTTGATTTTCTGTGAATGTTAAATCAGGGACAAGAGCTTACTATTCTTCATCTGCATAGAGATGAAGATATTGCATCAATTTATTATTTCTTCCTGCACGGTCAGATATTTTGTGCATGTGTGTGCGTGTGTGTGTGTGTATTTGTGATGGAAGAAAGTGTTCTAAAGAAATGCTTAGTAGAACTACCTTTT chr4 - 94230402 50888789 50888788 50890476 43339927 43339926 43341614 1688 TGCCATGATTTTAAGAAAAGACTTCTTGTAATTATGCAGTGATTGATGACTGTATTTGTATTTTTTTTATCTTGGTGTCATAAA-AGCTTTTTTTGAAGCTGGAATTAATATGAGCTTTGAAAAAAAATACTAATGGTTCTTTGGATTGTTGAACAATATTTTCTCTGAGGATTATGTGAATTAGTT-TTAAAGTCTCATTAAATGATAATTTTTAAACCCAGCTCTAAAGATTCACAGTCACATTTCAAATCAGTGGAGCATGAAGTTTGTAGGTAACACCTTGCTAGATATTTTGCTTGTACAGCTACATTCCataaatattttatt---atttaatattttcaatgtaataattttCTAAGATGTATTTCAGTTATTTTCACTATATATTTATTAATCAAATAACATATTCTCAGTGTTAAATACAATATTTT------AATTCTTTTTGGCCAATTTGA------------------CTATGCAGGA----GATCTTCAGCCTGACAGTGAAATTCTGCCAGGAATATAAGTAAATGATTTT---------TAAGATGGTGTAGCATTGTTTAAGAGGTAATTAACTATAAATTAGAATCTTT---AATCAGTTAATCG---TTGCTTG-CAATCCTAGTTCTG---------------AAATAATGTTATTTTTATCATACAGAATGAAGTTCAAACAGTTCATAAACTTCTGTTGTCATGCAGCGTGGTGACAATTGA--CTGTGTCAAAACGTGTGTCAAATTAGACAGACACAAATCAGATTTATTGTTAAACCATTTAAAATATATTTTAGAAGAGCCAGGAGGAAACTGTGGAAATCCTTGATAAATCATAGTAATATTAAAGAATGTCAGAAGTAAGCTTGTGGGGATTTGAGCTTGGGTGTCTACTGACTTATTATCAAAACACACTAAA----TTTCCTGCCATATCTGAGAGGCAGAGAAATTGCATTAGTCAATGCATGTATTAAAGGAAATAA-GAAAGCAGCAGCCCCCAAAAGGCAAATAAATCTGAGAAAGAATTTGGGAGATGAAGATAACACACTATTCCCAGATGAGTCTTGCAATATTTGTTTTCCATTCATTTTTATTTACTGAGAATTGGCTTCCTTCATAAATATAAAA------------ACAAAAT---TACAAATAAATGAAGAAAAAAGATAACCTTGGACACTTTGTAGATTGTTTACAACAATCTCTTTCAACTGAGTAGTAAATCAAAAGCTGCTTTGTTTA-GAGTCAACAGATTTCAGGTTCTGAACTTGTGCTTCAGCCTAGAATTTATTAACTGTGTACATATTGCTAATTGTAAATGTATTATTAAGTAGAAACACTAGATAAAGCTTCCTATGTTCACATTTCATTCTTCTTTGAAGATCAGA---ATATTGTTTGTCAGGAATTACTTTTC---TTTGGAACATTTCACTGATGAGTGACCCTTTGAAAAAGAACACCAGTGCTTTGATTTATTTTGAAGGCATTCTCATTAAACTGTGTACTGCTATATTGAAATACATGATTACTCTAAAAGTGCTGACACAAATACTTTTTCGTATTACTCTTTAAGTTTGTTGATTTTCTGTGAATGTTAAATCAAGGACAAGAACATACGCTTCTTCATCTGCATAGAGATGAAGATGCTTCATATATTCATTATTTCTTTCT---CTGCTATAAGTTTTATGAATACAGAT-----------------TTT----TTGAAGATACTGAACTAAACTGATATTTAGTAAAAATACTATTT ..........x...x:::....x.:.........::........:.::...:.....x......:..-::..x.x.........-...::............-x.:.........:x........:......x....:.....x..x.:.:x...x-.:....xx:...:.......::...:.x..-...x.....:......x.....:x.....:.:x.:.x..:..------..:.:x..x..x....--:.:..x....:....x....:.xx::....:..:.x.-.:...:x:::..x....x:::x:.........x....---....x....x..:x..:..x:.x:.x....:.::x.::.::-----:..:......:--------------....:....x.---..:.xx.x.x:........------...x:...:xx..x.......------------------.x:.::....----....:...::x.:...----..x.x.:::..:.x.:.:....x.x..:::.---------.x...x.:.-...x...x.xx:x...:...x...:..x:..----.......---..:.x:x.:...x---...:...-.xx..:..x:.:..---------------.......::..x::xx.x:..x:.-....:....xxxx....x.x.x..--...:..:.--------:....xx:.x..::--..x.......x:x.:.xx:.....:..-:.xx..xx.x:.x..x.....x.x...x.:x.......:........x.xx::.:.x::..x.:-...:...:.:..x..:...x.:..........::x......:..x...:..x:x..-------..:.x.x......:.-.x.:.x:.:xx....x.x.:.:..----..x::..x.x:..xx:...:::.---......:.::.:x::.......:....x:xxxx....-........:..:..:......:.....x..xx.............:..x...x..:.:..x.:-.:.:..x:.xx...xx......:...............::.x.........x........:...x................------------.x.....---....x...x..-----..:x.:...x.......x..x:-.x.........x..:....xx....x..........x::........x....x.....x-.x.x..::.:.....x...::.:.x.....x:..x.:x.:::---:.....xx.x....-..::x.x......x:.:..::...------:.::...:.x::xx.....xx.:......:.......:..:.:.x:....:..x:.---....x....:....:...x.....:.---.......::.....x......::x.::....xx:...xx..x.:......x:...............x............:....:......:...................xxx....:...........:..:......:.:..............x..........................:........:.x...xx..........................::.x...xx...:..........:..---.x.::.x.x:....:..x..:::x:.-----------------...----.x.....x.x..xx.....xx:..::......:..x...:x... 67M1I16M1D17M1I53M1I30M1D42M6I16M2I37M1I37M3D41M5I11M14I11M3I19M6D21M18D10M4D16M4I31M9D9M1I31M4I7M3D13M3D7M1D14M15D24M1I24M2I8M8I14M2D27M1I64M1I56M7I15M1I24M4D23M3I37M1D63M1I81M12D7M3D11M5I22M1I59M1D42M3I14M1I24M6I56M3D26M3D254M3D26M17D3M4D44M 1136/1604 70.8% 1688/94230402 0.0% 201/1604 12.5% 127283684 62930871 +3074 chr4 + 190214555 178188962 178188961 178189039 78 TATATACATATGTGT-ATATATCTATATATCTATATACATACATATATGTATGTATATATACAGAATACATAGATTTTA chr4 - 94230402 30477229 30477228 30477307 63753096 63753095 63753174 79 TATGTACATAAAAATTGCATGTCTGTGTGTCTATATACACACAAATATGTGCATATTTATACCCATTATATAAAACTTA ...:......x:x:.-::..:...:.:.:..........:...x......:::...x.....xx.x..:...:.x:... 15M1I63M 54/78 69.2% 79/94230402 0.0% 1/78 1.3% 147711733 42502822 +3037 chr4 + 190214555 178189051 178189050 178189103 53 TATATACATATATATGCATATATGTGTGTTTGTATATTTGTATGTGTGTATAT chr4 - 94230402 19704277 19704276 19704329 74526074 74526073 74526126 53 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..x...........:.:......x.....x...x:..x...:.......:x.. 53M 42/53 79.2% 53/94230402 0.0% 0/53 0.0% 158484774 31729781 +3130 chr4 + 190214555 178200155 178200154 178200216 62 CTACTGAATATATATATATATATATATATATATATATATATATATATATATAATGAAATACA chr4 - 94230402 23671315 23671314 23671376 70559027 70559026 70559088 62 CTGCTAAATGTAAATATTTGTATAAATATATATGTTTGTATAAAAAGATACAATGAAAGACA ..:..:...:..x....x.:....x........:.x.:....x.x.x...:.......x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 154528840 35685715 +3074 chr4 + 190214555 178217323 178217322 178217388 66 TATAAATAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTGCA--------TCAGTCCCACAGGACAG chr4 - 94230402 16882717 16882716 16882790 77347613 77347612 77347686 74 TACAAACAAGTTAAAAAAAAAAAAAAAAGACAAAGAAAATAGAGTAGGAGTAACTGGTCAGACACACAGCAAAG ..:...:....x................:.x...:....x.....x.x.--------....x.x.....x.x.. 49M8I17M 53/66 80.3% 74/94230402 0.0% 8/66 12.1% 161334606 28879949 +3176 chr4 + 190214555 178250870 178250869 178250935 66 ATAATTTTATTTTATATATAAGTTTATTTTTATATATATTTATATATGTGTGTGTATATATATATA chr4 - 94230402 35241734 35241733 35241799 58988604 58988603 58988669 66 ATAAATTTGTCATAGCTATAAATGCTTATTGAGACATGTTTATATACATGTGTGTATATATATATA ....x...:.:x..xx.....:.x:x.x..x.x.:..:........::.................. 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 143009136 47205419 +3356 chr4 + 190214555 178276225 178276224 178276269 45 TGTTTTTTGTTGTTGTTTGTTTGTTTTTTGTTGTTGTTTGTTTTT chr4 - 94230402 81470719 81470718 81470763 12759640 12759639 12759684 45 TGTTTTTTGTTGTTGTTGGGTTTTTTTTTGTTGTTGTTGGTTTTT .................x.x..x...............x...... 45M 41/45 91.1% 45/94230402 0.0% 0/45 0.0% 96805506 93409049 +3091 chr4 + 190214555 178300736 178300735 178300779 44 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGGAGAGAAA chr4 - 94230402 6440204 6440203 6440247 87790156 87790155 87790199 44 TCTTAAAAAGAAAAAGGAAAAAAAAAAAGGAGGAAGGAGGGAGA ...:.....:.....::...........:...:......:..:. 44M 36/44 81.8% 44/94230402 0.0% 0/44 0.0% 171860532 18354023 +3017 chr4 + 190214555 178327422 178327421 178327536 115 TAAAAGGATACCTAGGAAGGTAAGGAAAATGGCCAGCAAGAGACAGACAGAGAGAGAGAGAGAGAGAGAAAGAGAGAACCAGACAGACCTAGGGAATATGAGGGAATAGGTATTT chr4 - 94230402 66896846 66896845 66896960 27333443 27333442 27333557 115 TAAAAGCAAATTCTGGAGAGCAATGAAAGTATATGTATAGAGATACACAGAGAGAGAGAGAGAGAGGGTATGACAAGTACATAAAACAGTAGGAATGTTGTCAGAATACGTACTT ......x.x.:::x...::.:..x....:.:xx::xxx.....:.x....................:.x.x..x.::xx..x.x.:xxx....:.xxx..xx:.....x...:.. 115M 71/115 61.7% 115/94230402 0.0% 0/115 0.0% 111430576 78783979 +3098 chr4 + 190214555 178342196 178342195 178342241 46 CTATTTTCTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTAGTTGGA chr4 - 94230402 67754992 67754991 67755037 26475366 26475365 26475411 46 CTGCTTTCTTTTTCCTTTCTCTTTCCTTATTCTTTTTTTAGATGGA ..::..........:...:.....:...x..:.........x.... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 110587204 79627351 +3318 chr4 + 190214555 178350003 178350002 178350098 96 TCGGAGTCTCGCTCTGCAAGCTCTGCCCCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGAACTACAGGTGCCCGCCACCATG chr4 - 94230402 18197113 18197112 18197206 76033197 76033196 76033290 94 TTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG .:..x:..x:.:...:..:x.:xx:x.::.........x.:xx...x.xx.x........::.x................x...--.:....::.. 84M2D10M 63/94 67.0% 94/94230402 0.0% 2/94 2.1% 160152890 30061665 +3216 chr4 + 190214555 178366188 178366187 178366272 85 TGTATGTGTGTATATATATGTGTGTGTGTATATATATATATACACACACACATATATAAATGTATCACACATATAT-CATTATTTA chr4 - 94230402 4481679 4481678 4481759 89748644 89748643 89748724 81 TGTATGTGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATAC-----TCTAACATATATGTACACATTATCTA .........x.x:.....x........:.:.::.:.x.:.......:x......:-----.x..x..:.:..:..:-......:.. 55M5D16M1I9M 59/80 73.8% 81/94230402 0.0% 6/80 7.5% 173884509 16330046 +14938 chr4 + 190214555 178392096 178392095 178392470 375 AATCAAAACTTATATGTAATTATGCATTTATGATATTGCACCAACTTGTGGAATTG-TCTCTCATT--ACATTCCAAACAATATTTCTTCTGATGTATTTAATTCTCATATGGCACTTACAATTTTAACCATGCATTTAATTCCTAAATAACTGCCATCAATATTTATATGGTTGAACTTTTATCCTATTATATATTGTATAATTGCTACCATTAATTCATTTCCCAGAGGTTTACTTTTCAGAGTTATATAGTGTTTCAATGTCATATTATTTTGCAAAGCTCA-CTTTTTATGATGTAA-----------------TAGTCAACTCTAGGCTTTAACCCAGGCTAGTGATTAATGAC-AACCCATTAACATGAT------TTATTAA----AAAAAAACTTTATT chr4 - 94230402 50943906 50943905 50944309 43286094 43286093 43286497 404 AATCAAAGGTATTTAGTAATGGTGAGTTTATATTTCAGCAC-AACTTCTAAAAGTAATCTCTTGCTGAATATTCCAAACAAGATTTCTGCTGAAGCATTCAATTCTCATATGGCACTTTCCTTTTTAACTGTGCATTTAATTCTTAGCTAATTGCCATCAATATTTATGCTGTTAAACTTTTATCCTGCTGCATATTGTATAATTGCTACCATTAGATCATCTCCCAAAGGTTTTCTTCTCAGATTCATGTAATGTATCCATGTC--ATTCTTTTGCAAAGCACAGATTTTTATGATATTATTAAAATGTCTAACACTTGGTTCATACTATGGTATAACTGAGGTTGGTTATATCCAACAAATTCAGTAACTTCATGTTCAATTTTTAACATCAAAAAAGTATTATT .......:x.xx.xx.....x:..x:.....:x.x:x....-.....x.::..x.:-.....:::.--.:...........x......x....x.:...:..................x.xx.......::............:..:x...:................::x...:............::.::.......................:x....:.....:......x...:.....x.:..:..:...x..x.....--...x...........x..-x..........:.x.-----------------.:..:x.:x...x.x.x....:x...:.:..x..xxx::..-..::..x....x.x..------..x....----......::x..... 41M1D14M1I9M2I197M2D18M1I15M17I41M1I16M6I7M4I14M 282/372 75.8% 404/94230402 0.0% 35/372 9.4% 127448190 62766365 +4685 chr4 + 190214555 178397368 178397367 178398016 649 ACCTCTTTTCTTTGCAAATTTATAGCAATCACAGAGGAAACTTTCATGGATATAAAATCATTAGGTAAAAACTTTTTATGTTGTAAACATCATCAAAGTCATGATGTTTAAAAAACCAACCAAACAAAA-------AATACTAGCAG--ACAAACACATCTACCATACAGCAATGGAAAATTAGCA-GCCCCAACATTTTATTCTGGATTTTCTGAAGAAATAAATTAAGATGATATCCACATATTTCCATAAAAAGCTTTCAAAATAAGTAGT---------ACTTACTACTCTATGTGCATA--TGATTATTGCTGAATTGGTTTTCAGTTTGGA-TTATGCATATATATGATGCACATATATGGCATTATGCAAAAAAATGTTAAATGCTAAGAG-------GAATATGAGGGGTTTCTGAGAGAGCATGTACTTTCTTATGAGGGCAAGCTTTAAATGGCATTGAGGTCATTATCACTAGGGATTCAATCATTTCCAACAATCCCTTCAACCGGGAGGATTATGGGCTGACATCTCATTATTGAAGTACTGAAACATGAATAATTTGTCCTACGTTGATAGGAGATACTGAAACCCATATAGTTATGAGGTCATAGCTGTAAAGAATAAACTCTAAAATTATT-ACAAAAGAATAATAATGGGAAAGAAATACTA chr4 - 94230402 50947637 50947636 50948256 43282147 43282146 43282766 620 ATCTGCTTTTCTTGCAGCTGCAT--CTATGGTAGGAAAGGCTTTGATAGATATCAAACTGTGGGGA---------------TGTAAATATTATTA----------TTTTAAA---CTGGCTAAAAAGAAGTGTCTTAATCCCAGCAGCTGCAATCCCACC-ACTGCTCAAACCCAGAGATTTGATATGCCCAAACCTCTC---CAGACTTTTATGGTGGCAC----TGAGATCACAT--ACGCAATTCTAACAAGATGTATGAAAATATATGGTGGCTAAGTAAGTTTTTTTTTAATGTGTATACATCACCCTTCCTGAGAAGGTTTTGTATTTGCAGTTATGGAGATACATGG-ACTTATGTTTAAGAATAATCAGATGGCTATTAA--GCAAAGAAAACATCTGAATAAAAGAGCTTTCT---AGGTTACATGCACACTTAGAGACGCCAGTTTCAACTGCCAAATAAAGCATC-TGATATGGCATTTTGTTATTGCTGAAAATTCTCACATGGAAGAAGATTATGAATTGTCATTGCATTAATCAAGTAAAGAAACATGAGTAATGTGTCCCACCT------GATATATAGAAG---AGACGATTGT---ATCATCTTTGTAACAGATATGTGTTTAAATAAGTAACCGATGAAATATAGTAGGAAAATAATATCA .:..x:...::.....:x.x:..--.x..x::..:::.::....x..:.....x...:::.x:..x---------------......:..:..:.----------x......---.:::.:...x.:..-------...x.:.....--:...x.x..:.-..:::x..:xxx::..:.x..:::.-....x...x.:.:---.x.:x....x..:x.:x.:----.:....x.:..--..::.x...:.xx..:.xx.x.x......x:.:..---------.x..x:.x:.:x.....:...--.x.::x..x....:xx......xx:....x.-.....x.x...:...:-:.x:..:.x.::x.x..xx..:.x::x.:....--..x....:-------.....x:..:.x.....---..:x:.::.:.x:x....x:::x..x..:..:..x..x..xxx.::x...:-.x.:xx..x...:x:.:...x.::.x...:.::x..xxx::..:.......:::..x...:x.....x.x.....xx.........:....x.....:..x.------..x...:x...:---.x.:::..:.---:....xx:.....x::...x::x:.x....x.x.-..x:.x...xx...:.:.....:x....::. 23M2D41M15D14M10D7M3D14M7I11M2I11M1D25M1I13M3D19M4D11M2D35M9I21M2I31M1I16M1D33M2D8M7I17M3D51M1D102M6D12M3D10M3D34M1I31M 357/590 60.5% 620/94230402 0.0% 89/590 15.1% 127449731 62764824 +3104 chr4 + 190214555 178408296 178408295 178408390 95 GAGATTAGCCTGGGTAACACAGGGAGACCCTGTTTCTACCAAAAACAAACAAACAAAAAAATAAAAAATAAAAGAAGAAGAAGAAGAAAGAAAAA chr4 - 94230402 93527727 93527726 93527814 702589 702588 702676 88 GAATTTAGATTAGACAAAACATG---ACATCATTTCTGCCTGCAACAAGAAAA----AAAATAAAAAATAAAAGGGGAATCAGAAGAAAAGAAGA ..:x....x:.:.::..x...x.---..x:::.....:..x:x.....:x...----.................::...xx........::..:. 23M3D27M4D38M 62/88 70.5% 88/94230402 0.0% 7/88 8.0% 84880569 NA +3028 chr4 + 190214555 178408330 178408329 178408393 64 TCTACCAAAAACAAACAAACAAAAAAATAAAAAATAAAAGAAGAAGAAGAAGAAAGAAAAATCC chr4 - 94230402 26643702 26643701 26643765 67586638 67586637 67586701 64 TCTTCGAAATGTAAACACAAAGTACAGTTAAAAAGAAAAAAAGAAGAAGAAAAAAGAAAAGTTC ...x.x...x::.....x.x.:x.x.:.x.....x....:...........:........:.:. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 151764628 38449927 +3191 chr4 + 190214555 178416857 178416856 178416899 43 GTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTGTATGTATAA chr4 - 94230402 21897543 21897542 21897585 72332818 72332817 72332860 43 GTTTTTTGTTTGTTTGTTTTTTGGTTTTCTTTTTTATGTGCAA .......................x....:....x.....::.. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 156519314 33695241 +3237 chr4 + 190214555 178461062 178461061 178461105 44 TTTGTGTGTCTGTCTGTGTGAGAGAGAAAGAGAGAGAGAGAGGA chr4 - 94230402 18982313 18982312 18982356 75248047 75248046 75248090 44 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA .:.......x...x.............:..........::.... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 159478749 30735806 +7447 chr4 + 190214555 178484279 178484278 178484538 260 TTTTTAAACCAACAATTTTAAATTTTTCTCACTAGTCTGTTTGTAGGTAGTTCACCATCTGTAAAATGACTTAAAAGGAACATGAATATGGAATGTGTGCAGGATGTGA--GTGCCCTATTTACAAAACAAATTGGTAGATTGCATTTGGCTTACTCTGAGAAACCCAAATAAATATGTTCTTTTAGAATTTCACTT--ATTCTGTTAATAAACTAAAACAAAACAGTCCTAAAAACATAAAAGATGA---AGTCAAACACAAATAT chr4 - 94230402 51021340 51021339 51021598 43208805 43208804 43209063 259 TTTTTCAGATGATAATTCTAG--TGTTCTCAACAGTCTGTATGTAGTCAG----CCACCTGCAAAGCT-TGTGAAAGAAGAATGAATATGAAGTAAATGTAAAATGTAACCAAGGCCTATTTACAAAATGAATTGGCAGATTTCATTTAGTTTGCTCTGGAGAGCTACTGCAAATATGTTCATTCAAAATTTCATTTTATTTATGCTAA-AAAATCAGGCAGATAAGCAATAGAGAAGGAAAAAATAATATTGTAAAGCACTAATAT .....x.:x::.:....:..:--.x......x:.......x.....x:..----...:...:...::x-:x.:....:.:x.........:.:.:x:..:.::....:.--:x.x.............::......:.....x.....:.:..:.....:::.:.:xxx::..........x..:.:.......:..--x..x..:...-...x.x.::..:.xx..:xx..:.:.x:x....:..:.---x..x..:...x..... 21M2D27M4D14M1D40M2I86M2I10M1D38M3I16M 170/252 67.5% 259/94230402 0.0% 15/252 6.0% 127462939 62751616 +3042 chr4 + 190214555 178507470 178507469 178507515 46 CACACAAAAAAAAAAAAAAAGAAAAAGAAAAAGGAAAAAAAAGCCC chr4 - 94230402 59518568 59518567 59518613 34711790 34711789 34711835 46 CACACAGGAAAAAAGGAAAAGAAAAAGAAACAATAACAAAAAGCCC ......::......::..............x.:x..x......... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 118988902 71225653 +32732 chr4 + 190214555 178520137 178520136 178520969 833 CATTTTATATCAATTATGTGCAAAACCCTGCCAA-TTATCTTCTCATAT---AATCCCCATCAATAACCGAGAAGCATAAAAGATATAAACTCAAACCATCTGCTCTCACTACAGTAGGCAACT---GAGAGCTTAGACAATAACTCACACAGTAAAATACTCCAATACATTTATCTGGGATCATGCTGTTTAAGTGGGATTTGTGATTAAAAATATTACCACTTTGGCCTATCCACTATTAGAAAATATGTTTTCCCTTTTTAGGAAAAGCACTGTCATTTCTGTTTTATTACAATAGTAAATTAAGAGAACTACCGCCAGCCATCTATAAAGAACAAAAACTGCACTTCCAGTTTATGCTTCACTGTAATTCTTTTTCCTGTTGATGTTAACAATACCCAGGC---TCTTAAAAAAAAGAAAAGGAAAAAAAATAGCCTCCAGAAATTCATTGCTTTGACACCTGTGTAATTTTTGAACCATGCTAAATGCCAAAATAAAGCTGTATCAAAATATAAAATGTTAACCAAAAGTGCCTATATGACCTAAGAA-------------AAGGAAGTATTTA-AAGATAACAGTCACCTAAGATGGCTGATATTTAAAGATAATATAGTGTGACTTTTTCTAAGCGTTTGAGGCACAGAAC------TGACAGTTGGCAAAAATAGATAGGATTCCAAACGCTGTTGCAATAAGAGTCCAGAAGACAGACAATTCCCTCCTGTTCTCCATCAGTGTCCTTATCTTACATTATACCATATTCGACCTGTCAAGATATTTCAATATTTCCCACATTAACAACAAAGATATGTAAACGACGATATTACACTGTCAAATCCCCTAAACAT chr4 - 94230402 51030136 51030135 51030980 43199423 43199422 43200267 845 CATTTAGTGTCAATTATAGACAAAAAATAGCCCACTTATTGTCTCATATTAGCATCCACATCAATAACTGTGCAGAACAAAAGGCATAAACTGAGACCATCTGCTCTCACTACAATAATCTACCTAAAAAAGCTTAGCCTGTAACTCACA--GTAAAAGATTCTGATGCATTTATCTGGGATCATGCTGCTTAAGTGTCTTTTGTGATTAAAATGATTACTGCTTTGGCCCATCACCTATTAGGACATACATTTCCTCATTTCGAGTAAAATATTGTCATTTAATCTTTATTACCTTATTAAATTAAGATGACTTCTACCGGATGCCTACAGGA---AAAAATTATACTTTTATTTTATGTCTCATTGTCACTTTCTTTCCTGTTGATGTTAAGAATACTTAGACATTTCTTAAAAAAAAAA-----AAAACCTATATGCTGCAGATTTTTATTGTTTTGACAAGTGCACAATTCTTGAGCTGTGCTAAATGCCAAAATAAAGCTATATCAAAATGTAAAATGTTAACCAGAAGTGTCATCATGACCTGAAAAGTAAAAAAGAAAGAAAAGAATATTCAGAAGACTACAATCACAAAAGATTGTTGATATTTAAAGAGAATATACTGTGGC-TTTTCTCCACATTGGATTTGTTGAATTTCTCGTGGTAGCT-GCAAGAACAGATAGGAGTTAAAGAAATATTGACAAAAGAGTATAAAAGACCGATAAATTCATGCTGATTTAAACCAGTGTACCTATTTTATTCTCTCACACATCAAGCTTGTCAAGTCA--TCAAAACTTC---CATCTTCTGAAAAAATATGTAAATGACAGTAATGCATTGT-AAATGCCCAATACAT .....x:.:........:x:.....xx:x...x.-....:x........---x....x..........:.x.x..x.:.....::.......x.:...................:..:x.x..:---:.:.......x.x:.........--......x.:..::..:.....................:.......xxx.............xx.....::........:...xx.......:.x...::...:.:.x...:::.x...::.:........xxx:........xx..x..........x:...x.::..:.x:::...:.:::---.....:.::....::.x......::...:...x.:.:.:.................x.....::..:.---............:.-----....xxx...xx..x....xx..:....:.......xx..:::....:....:.::......................:.........:..............:.....:.xx:.......:.:..-------------..:::.:....:.-....:x...:....xx.....x.:.............x......x....:.-......xx:.:..x..xx:::x...:------..::..:.-....:..:........x.:x..:x:x.:...xx.x......x:.:.....x..:..x.:.x.x...x.:.xx.:......x.:...:...:x:.x.xx..:..:x::.:.......x:.--....x.:...---...:xx.x:x...:.........:...::..x.:..:...-....x...x.x.... 34M1I14M3I72M3I23M2D182M3D68M3I14M5D126M13I13M1I51M1D26M6I8M1D119M2D10M3D40M1D15M 592/815 72.6% 845/94230402 0.0% 48/815 5.9% 127490001 62724554 +3029 chr4 + 190214555 178525324 178525323 178525367 44 TGTGTGTGTGTGTGTGTGTGTATATATATTATATATATAATATA chr4 - 94230402 63396167 63396166 63396210 30834193 30834192 30834236 44 TGTGTGTGTGTGTGTATATATATATATATAATACATATTGTATA ...............:.:.:.........x...:....x:.... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 115129157 75085398 +3211 chr4 + 190214555 178538387 178538386 178538430 44 TTTTTGAGTGTGTGTATGTGTGAGAGAGAGAGAGAGAAAGAGAG chr4 - 94230402 18982311 18982310 18982354 75248049 75248048 75248092 44 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG .:.:..x........:.....................:..::.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 159556076 30658479 +3022 chr4 + 190214555 178538389 178538388 178538426 38 TTTGAGTGTGTGTATGTGTGAGAGAGAGAGAGAGAAAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ....x.......::.....................:.. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 96909327 93305228 +3024 chr4 + 190214555 178544814 178544813 178544859 46 AAATATAAGAGCTACACTAAAAAAACAAAACAAAACAAAGCAAGCA chr4 - 94230402 18577915 18577914 18577960 75652443 75652442 75652488 46 AAATATAGAAGCCACAATAAAAAAACAAAACAAAAACAAACAAACA .......::...:...x..................xx..:...:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 159966899 30247656 +16138 chr4 + 190214555 178556270 178556269 178556590 321 GTCTTGCATCAGTAATTGATTTGTTTATGATACAAACTAATTCTCAGTATTTTGTCTCTTTCCTGACAATAACAAGTAGAATCATGAACAGGGAAGGTTATTATTTACTAGCCACAGCTCAATGTACCATGTAATCAAATCCTTTGTCAGAGCATCCTGCCACATAATCAGATCGTGTGAATTGTCAAAGGCAATTTTATAAATA--TATATTCATTTAAAGCCTCGGTAAGCTTGTTATAGTGTAGGATAAGTTCGTTTTTCTTTTTTTTTTTTTTTCCTCTGTTGTTGTATTCTGAATTCTTGTGTATGGAGTAATTACAT chr4 - 94230402 51040700 51040699 51041001 43189402 43189401 43189703 302 GTCTGGCCTCAATAATTGATTTGCTTATGGCGATTACTAATT--------TGTGCTATTTTTCTAACAATAAGAAATAGAAACATGAATGTAGAAGGTTATTATTTACTAGCCACAGCTCAGCCTACCATATAATCAAATCCTTTGTCAGAGCATCCTGCCACATAATCAGATATTGTGAATTGTCAAATGCAATTGTATAAATATTTGTATTCATTTAAAGCCTCAGTAAGCTGGTCATGGCATGCACTAAGTATATATTTTTTTATTTGTGTACTTTCTCCAGT-------------TCTTTATACATGAAGTAATTACAT ....x..x...:...........:.....:::xxx.......--------.x..::x:...:..:.......x..:.....x......::x:.............................::x......:..........................................xx..............x......x........--.:.................:.......x..:..:.::.:x:x.....x::.x...:...x...x.x.x:..:...::x.-------------.::..:.::...:........... 42M8D155M2I79M13D24M 237/300 79.0% 302/94230402 0.0% 23/300 7.7% 127515570 62698985 +3066 chr4 + 190214555 178560697 178560696 178560775 79 AGCGAGACTCCATCTCAATAAAAAAAGGAATATAAATAAATAAATAAACAAACAAAAAATACAGTGATGCAAAAAAAAA chr4 - 94230402 46943892 46943891 46943970 47286433 47286432 47286511 79 AGTAAGTCTTAGTAGCAGTAAAAAGGTGTGTTCACAAAAACAAACAAACAAACAAAAAATACTTTGGAGCAGAAAAAGA ..::..x..:x:.xx..:......::x.x:.x:.x.x...:...:.................xx..:x...:.....:. 79M 53/79 67.1% 79/94230402 0.0% 0/79 0.0% 131616805 58597750 +3018 chr4 + 190214555 178580824 178580823 178580882 59 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTCTTATTGCCCAAGCT chr4 - 94230402 54371589 54371588 54371647 39858756 39858755 39858814 59 TTTTTGTTTTGTTGTTTTTTTTTTTTTTCAGACAGAGCTTTCCCATTAATATCTGACCT .....x....x..x..............x........:...x.:x...x.::.::.x.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 124209235 66005320 +3043 chr4 + 190214555 178585122 178585121 178585170 49 AATCTTTGTTTTTCTTTTTTGTTTGTTTGTTTTTGTTTTGTTTTGTTTT chr4 - 94230402 56587265 56587264 56587313 37643090 37643089 37643138 49 AACTTTTCAGTTTGTTTTTTGTTTGTTTGTTTTTACTTTGTTTTGCTTT ..::...xxx...x....................::.........:... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 121997857 68216698 +3055 chr4 + 190214555 178596169 178596168 178596205 37 ACAAAACAGAAACAAAACAAACAAACAAAAAAAAAGA chr4 - 94230402 57216529 57216528 57216565 37013838 37013837 37013874 37 ACAAAACAAAAACAAAACAAACAAACAAAAAAAAGAA ........:.........................::. 37M 34/37 91.9% 37/94230402 0.0% 0/37 0.0% 121379640 68834915 +11384 chr4 + 190214555 178616054 178616053 178616358 305 AAGAAAGAATTCAGCAGGGTAATTTCCTTAATATAGCATGCAAG-TAAGTGATTTAGTAATTAACTCTTCTTGCAGATTCTAGCTCATGCAGATGTAAGTTATCGAGTCACTACTTCATTAGCT-GGCATAGATTAGATGTCTTCTAAGGGCATATCTGTACATTTTGTGCTTCACTGGTGTTACAGGACTCATCAGTATGGTCTGGATATGAAAACTCTTTCATTTTGTGTTTCAATGATAGAAGAAAATTACATACTAAATGTTGAACAGAA-------------GAACTTTCTTTGAGTTCAACATCAAAACTACAA chr4 - 94230402 51062432 51062431 51062746 43167657 43167656 43167971 315 AAAGAAGAATATAGTAAGGCAATTTCCTTAAGAAAGCAGTCAAGATATAAGATTTTCTAATTAACTCTTCTCCCCTATTTTAGCTTATGCACATGTAAGTTGTCTAATTGCTACTTTATTGGCTCTGTGTAGATTGCTTGTCTTCTAACAGC--ATCTGTATGCTTTTTGCTTCACTGACATTATAGGACCCATTGCTGTGATCTGTATAAGAAAGCTATATTG-CCTGAGCTTGA--GATAGAAGGAAATTGCATACTAAAAGCTCCACACaatttttattttattttatttttttGCTGTTTAGTGTGAGAACTACAA ..::......x:..:.:..:...........x.x....xx....-..x:x.....xx..............:x.xx...:.....:.....x.........:..x.:.::......:...:...-x.::......:xx..........x:..--.......:::...x..........:::...:.....:...::x.:..:....x...x....:..x.x.::-::..x.:..x.--........:.....:.........x.:.xx...x..-------------xx.:...:..xxx...:.:::.x.:........ 44M1I79M1I27M2D70M1D11M2D36M13I33M 216/300 72.0% 315/94230402 0.0% 20/300 6.7% 127553622 62660933 +3311 chr4 + 190214555 178662414 178662413 178662472 59 CTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ....:.......x.:xx...x.xx.x........:............:......x.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 160465275 29749280 +3063 chr4 + 190214555 178705247 178705246 178705309 63 TTTAAAGAATAAAACTCCCACAAAAGTGCTAGAAAAGGAGGGAGAAAAAAAAAAAAAAAAATC chr4 - 94230402 18018710 18018709 18018772 76211631 76211630 76211693 63 TCTGAAAAACAAAGCTTCTAAAAAAACTCCAGATGTGAATGGAGAAGGAAAAAAAAAAAAATC .:.:..:..:...:..:.:.x....::x.:...x:x.:.x......::............... 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 160686537 29528018 +24002 chr4 + 190214555 178712126 178712125 178712785 660 ATGTATTTACTTAGATTCTCAAAGATAATTAGCT--TTTAGTGGTATCATTTTGGAATGCACAA-------CCAAGAAAAAAAAAGTTCTACTACTCTCTAAATGTCTAGAAAATGAGGTATTTTCTATGAGAGAAATTTAATGTTC--TTTTTTTTCTCTCCTGACAACAGTATCTTACAAATCAGTGCCAAATGATGCACAAAAA--TCCCTAGGTATCTTAAAGAGGAAAAAATTATGTAGGTAAACAGATAAATCTTTAGAACATTTGTCTTTATGGGAGCAACTCCTGCTGTTGGTCTCTAACCTGTAGGACATTAGTCTTCCCTAAATTGCCAATGGTGTTCCACATCTCAATGATAAATAGAAATCACTGGAAAAAATAGCA--CATTCTTCC--ACAGAGAATTTCCAGACAGACATAGGCCTTTAAGAA-AAATGCATGCATAAACTAGATTATTTTCCATTGTGGCACATTTCACGCTAGGTCTTTACCCACAAGTCATTTTTCTCAGTTGTACAGAAAAAAAAAAAAAAAGAAATAGCTTTGAGTAAGACATTACATAAAAGTGTACACTAACATGATTGTTTATA--TTTAAGTGGAAC----AAGAAGG----AAGATTCCACATCAGAGAGCATTCATCATATGTAATGAATGATTAATCACCAAAGACTGCTT chr4 - 94230402 51090721 51090720 51091391 43139012 43139011 43139682 671 ATTTATGTACACAGGTTCACCAAGGTAATTATATGTTTTAGCAACATCATTAAGAGCTCTGCAAATATCTTTCACTCTACAGTAATTTCTGTTATCTTCCATCTGTCTAAAATATGAGGAATTCTTGGTAAGAGAAGTCTAAGGTGCGATGTTTCTTAACTTCAGACAACAACCTCTTACAAATCAGTAGCAAATGATGCACAAAAAAATCCCTTGGTATCTTAAAGAGGGAAAAATTACATAGGTAAACAGATAAATCTTTAGTACATTTGTCTTTATGGGAGCAGCTCTTGCTGTTGGTCTCAAGCCTGGAGGACATTACTCTTTTCTAAATTGCCAGTAGTGTCCCAAAGCACGGTGATAAATAGAAACCACTGAAAGAAATAGCGTTCATTCTAACATACAAGAACTTTCCAGACAGACGTTGGCCTCTGAGAACAAACACTTAGATAAAATAGATAAGTTGCAATTGCAGGATATTTCACTCTGGGTCCCTGTGAAC-AGACATTATCCT-AGCTGTGC--------------AAATAAGTGCCTTTATGCCAATCATTACATAATAA-ATAAATTTAAGAGATGGTTTAAAACTTTCAGGAAAACAGAGAAAAAGGTAAAAAGGTCTTGGTACAGCAGCTATGTTTTGTATGTAGTCAGTGATTTATTCCCAAGCATTACTT ..x...x...x:..:...x.x...:......xx.--.....::::......xx.::x.x::...-------:..xxxx.x.:x..x....::..:::..:.xx......:..x......x...:.:x:.:......:.:...x..x.--.x...:..xx..:.x.......::x..............:x.................--.....x...............:........::.......................x.....................:...:.............x.:....x.........x....::...........:.:....:...x.x.x.::.............:.....:..:.......:--......xx.--...:::.x.............:.x.....:.:....-...::.x.:x.....x.....x.x..x.x....::.x.:.......x..:....::.::xx..-..x....x.:..-..:...:.--------------...x..:.:x....:x.:x.:x..........x.:-:..x.:.x.x:x...x.....x.--...x..x::...----..:....----...:.::::xxx...x::x:..x:x.::......:.x.:.....x..:x....:x.:.:... 34M2I28M7I76M2I58M2I180M2I9M2I36M1I63M1D12M1D8M14D35M1D23M2I12M4I7M4I62M 465/643 72.3% 671/94230402 0.0% 45/643 7.0% 127621405 62593150 +3149 chr4 + 190214555 178724257 178724256 178724327 71 CATTCCATTTCTTCCACAACCTTGCCAGCACCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTTTTT chr4 - 94230402 35318509 35318508 35318579 58911824 58911823 58911894 71 CATTACATTTTTTCTATCAACCAGGCAGAAAATGCTTTTTCTTTTTTTTCTTTTTCTTCTGTTGTGTTTTT ....x.....:...:.:x.x.:x.x...x.xx..:.....:........:.....:..:.x...xx..... 71M 51/71 71.8% 71/94230402 0.0% 0/71 0.0% 143405748 46808807 +3126 chr4 + 190214555 178735817 178735816 178735865 49 ATACATGTATGTATACATACATTCACACACACACACACACACACACACA chr4 - 94230402 8395814 8395813 8395862 85834541 85834540 85834589 49 ATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..x:.::.......:.x......x.:.................x..... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 170340003 19874552 +3027 chr4 + 190214555 178735819 178735818 178735873 55 ACATGTATGTATACATACATTCACACACACACACACACACACACACACACACACA chr4 - 94230402 8395808 8395807 8395862 85834541 85834540 85834595 55 ACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ........x..:.:..::..x.x:...:xx.:.................x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 170340011 19874544 +3079 chr4 + 190214555 178738463 178738462 178738503 41 TGTGTGTGTGTGTGTGTGTGTTGTGTCTGTGTATAAGTGCA chr4 - 94230402 66425997 66425996 66426037 27804366 27804365 27804406 41 TGTGTGTGTGTGTGTGTGCATTGTGTCTCTGTACAAGAGCA ..................::........x....:...x... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 112312466 77902089 +10738 chr4 + 190214555 178738916 178738915 178739167 252 ACTCCTGTCTATCCAAGGTACAATGTCTATTTTGTGTTCAAAAGCCATAATTATTTCAAAACTAGGCATTGGAGGAAACCAGATAATTAGTCTAGTACAGCTGGTGTAAAACACTACTGGCAGAAACACTGATATCATTAAAAATTTGGCAAAGTATCTTATAAGCAATACTCCTGGGAAAATGAAACAAATTAAGCACCTAAGTATTTTTTTTAGAAACTAAGAAAGTGTTTATAAAGGACTTCCGATTTT chr4 - 94230402 51099452 51099451 51099700 43130703 43130702 43130951 249 ACTCCTGCCTATCCAAAGCTTCCTGTCTATTATATGCTCAGCGGCCATAATTATTTCAAAAATAGACTTTTGAGAAAACCACATAATTAGTCCAGTGCAGCTGGTATAAAA-ATTACTGGCAGAAGTAGTAGTATCATTAAAAAATTGGAACTAAAGCATACCAGATATACTCCAGGGCAAGTTAAAC-AACACAGCCCCT-AGTAAATATTTCAGAATCCAGGATAGTACACACTGAGGGCACCCAATTTT .......:........:.:x:xx........x.:..:...:x:..................x...:.x..x...:......x..........:...:........:.....-.:...........::.x.::............x....x.xx:x.x.x..:x..xx.......x...x..:.x....-..:xx...x...-....xx.x...:....x.:.:..x...::x:.:x:...:.x:..:..... 111M1D76M1D12M1D50M 182/249 73.1% 249/94230402 0.0% 3/249 1.2% 127639464 62575091 +3431 chr4 + 190214555 178742112 178742111 178742197 86 AAAAAAAAAAAAAAAAAAAAATATAGATCTATCTATATATATATACACACACACACACACGCACAAAAATTAAACATTACTCTATA chr4 - 94230402 60979342 60979341 60979420 33250983 33250982 33251061 79 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACA-----AAAAA--AAACCCTACTGTGTA .......x..x.....x...xx.x.:x.....x....:.:.....:.............-----.....--....x:....x.:.. 59M5D5M2D15M 63/79 79.7% 79/94230402 0.0% 7/79 8.9% 117762770 72451785 +23570 chr4 + 190214555 178751400 178751399 178752043 644 ATAATTATTTTAAACCATTTTATAAAACGCTGACTTTATGATTT------TTTTATTATTCAGTGTCAAAATATAAAATTTGCCCTCTTTACCTTGAT-AACTTGTTACATCTGTCATCTTTCTTTAGGGTT--------------------TATACGTGT-----TCCCTTTATTAATCACTTCTCATTTCTATTTAATGACCAAATTCAGTTGTCAAAGTAATTAAATCTACCTTAGGAACAACTTACCATTTCTATGTGGTTCTCAAGTCTTTTGCTAAAGTAGCAGAAAACTTCCTTCTAAAATGGTGTAAAAGTGAAAAAAGATATCATATTGAATAGAAAAATCAAGGAGAATAATACCCTAAAGGTAAGGATCTTAAATGCCAAGTGCCCTTTCTCAGCCTCAACCATTTATTCTGAAAATGGCCTATCAAAAAAGCTTAGAAGGAGCAGTTTAATTACTGTTCCTTTGACATAAGTAATAAATTTTCAGTAGCAGAACCATGCATTTATTTAAGGCCAAATGGTGTACAACAAAACTGTCCTCCAAGGTATTTCTTTCTACC-----ATTTTTCCCCACTTGGCCTCTACAGCTACGTTTT--AACAACAATGTCTTTTTTGGGAGATATTTTAAAATATAAGCCTTAAATCATGGTTCTCTTTAGAAATAATAA chr4 - 94230402 51106818 51106817 51107468 43122935 43122934 43123585 651 ATAATTATTTTGAGTGCTTTAGTATGAG--TGACATTGGTTTTTGTTAGATTCTATTAATCAATGGCAAAATGCAAAATTTGCCACTTTCATTATGATCAGACTACTGCGTTTCTC--TTTTCTTCAAGGCTGGTATAAGATTTGACTGatgtatatgtgtgtatatatatatatgtatatatatatatTTTTTTTTTATGA-------------GAAGAACAATTACATTTATATCA--CACAACTTTAATTTTACAGATATTCCTTAA-----CTGAAAAAGTAGATATTGGCATTGCTCTAAGTTGGTAGAAAAAGGAAAAA-----TTATGTGAGCATGAGAAAGCAAGGAGAATAATATCCTAAAGGTAGGGTTCTTAAATGCCAAGTGCCCTTTCTCAGCCTCAACCATTCATTCTGAAAATGGCCCATCAAAAAGGCTTAGAGGGAGCAGTTTAATTACTGTTCCTTTGACATATGTAATATATTTTCAGAAGCAGGCCCATACATTTATTTAAGGCCAAATGTTGTACAACAAAACTGTCCTCAGAGGTATTTCATTCTACCATCCTATTTTTTTCCACCTGGCTTACCCTGCTATTTTTTTCAATAACTATGTCATTTCT-GGAGACATTTTTAA--ATGAGGCTTAAATCATGTTCTCTTTTAGCAGCACCAA ...........:.::xx...x:..x:.x--....x..:xxx...------..:.....x...:..x......::..........x::..:.::x....-.:x:.::.:.:.:.x..--:......:.:..:.--------------------....:....-----.x:x.x...xx..xxx.x:x:....:.x...x....-------------xx.:.::.....x..:..:x.:.--x.......xxxx...x:.x:.:x.:..:..-----:..xx.......xx:xx::.x.:x:.....:x....:x....:x......-----.:..:.x::xxx..:...x..............:..........:..x......................................:...............:........:.......:...............................x......x........x.....:x....:....................x....................x:.........x.......-----......::....:....:.x:x.x....:x....--..:...x.....x...:.-.....:.....x..--..:..x...........x.::::.....x.::.x:.. 28M2D14M6I48M1I17M2D14M20I9M5I36M13D23M2D30M5D50M5D240M5I34M2I18M1D14M2D37M 456/612 74.5% 651/94230402 0.0% 71/612 11.6% 127644582 62569973 +3020 chr4 + 190214555 178767116 178767115 178767186 71 TATACGTATACATATACACACATATATATGTGTGTGTGTGTGTATGTGTATCTATGTATGTATATATGTAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ..:::.:..:............:.x....:::.:.x.x...:.:::...:.:.:::.:..x....:...:. 71M 45/71 63.4% 71/94230402 0.0% 0/71 0.0% 107136981 83077574 +3050 chr4 + 190214555 178767150 178767149 178767201 52 TGTGTGTGTATGTGTATCTATGTATGTATATATGTATATACACGCACACACA chr4 - 94230402 23629639 23629638 23629690 70600713 70600712 70600764 52 TGTGTGTGCATGTCTATATATGTATGTATAGGTGTACATGGACCTACGCACA ........:....x...x............x:....:..:x..x:..:.... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 155137511 35077044 +3095 chr4 + 190214555 178791902 178791901 178791974 73 AAAAAAAAAAAAAAAAAAAACAAAAAACAAAAAAACACGCACACACACACACACACACACACACACACACAAC chr4 - 94230402 60979342 60979341 60979414 33250989 33250988 33251061 73 AAAAAAATAATAAAAACAAACAAAAACTCTATATATACACATATATACACACACACACAAAAAAAAACCCTAC .......x..x.....x.........x:xx.x.x.:..:..:.:.:.............x.x.x.x..x.x.. 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 117812560 72401995 +3188 chr4 + 190214555 178819517 178819516 178819576 60 TGCCCAGGTTTTGCTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTTTT chr4 - 94230402 76612821 76612820 76612880 17617523 17617522 17617582 60 TGGCTTGGTGCAGCTTTTTTCATGTGTTGTTTTTTTTTTTTTGTTGTTGTTGTTGGTTTT ..x.:x...x:x........::.x....x.............x..x.........x.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 102206696 88007859 +3194 chr4 + 190214555 178819518 178819517 178819563 46 GCCCAGGTTTTGCTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 70771411 70771410 70771456 23458947 23458946 23458992 46 GCATGGGTTTTGCTTTTTTTGTTTGTTTTGTTTTTTGTTTTTTGTT ..x::........................x......x......x.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 108048107 82166448 +8846 chr4 + 190214555 178852146 178852145 178852430 285 GCCAAACATAACTGTATA---GGTATTTGATGTCCATTTAATATCTTTTCACAAGGATGGGTATTTTAATCA---ACTTGAAAATTACCCTTCAAAGAACTTGAGTTTAAATTGTTAGAGTGATAAGTCATATTTTAATACAATGTGACTTGAATGATAACATTTAATTTCATGGAAAATATGACACAGTGTGACTGGTCAACT-----CTGCTTTAGCCAGATACAGAGC-ATATATTGCTTTTAAGTATTTAAAATTATAT----TTCTATAAGCCAAAATGATTTGAA-TTATCTGGAT chr4 - 94230402 51140821 51140820 51141118 43089285 43089284 43089582 298 GCCAAATA---CTGCATATTTGATATCTGAAGTGTACCTATTGACCTTTAACTGGAATGGATATTTTAATCCCACACTCGAAAATTACCCTTCAAAAGACTTGAATTCAAATTGCCACCATGATTTGTCATCTTCTAATCTGATGTGACTGGAATGATAACATTTGCTTTGATGTGCAATGTAATCCAGTGTGACTGATCAGATGCAGCCTACCATAACCCTGCAAAGGGCAATGCATCA-TACTCGGAAATTAAAACCATGCTTCATTCTGGAAGTCACAGTAAAAGGAACTTACCTAAAT ......:.---...:...---.:...:...x..x:.::..x.:x.:...x..x:.:....:..........x---...:.................::......:..:......::.xx:....xx.....x..:....x::........x..............:x...x...x:x...:.:.:x...........:...:x.-----..:.:x..:..xx::.x..:..-..::..::-.x:.x:.x.x......::..::----....:x...:..x.:.:.xxx...-...:..::.. 8M3D7M3I51M3I129M5I22M1I8M1D22M4I24M1I10M 195/281 69.4% 298/94230402 0.0% 21/281 7.5% 127711325 62503230 +5862 chr4 + 190214555 178898484 178898483 178898687 204 CTGACGCATAGTGGGCAAA--GTTTAATATGTTTCAGATATGGAAGGGAATCTAAAGTAGTGAGGGGGCAAGTGCAAGTTATAAGACACAGAATGAATATTGTTTTGTGTCACTAAGTGAAAAGCCAAATGTACACTATGAGATTTACGACATAAGCCA------AAAACAAGAAAACATTTGCAGTCCTGAACATCAATATTTTCTTCAAC chr4 - 94230402 51170005 51170004 51170213 43060190 43060189 43060398 209 CTGATGTACAGTGAGAAAAAAGTTCAATACGCTTCAGATTTGAAAGACAGTATGAAGAATTGAAGGTACAAGTAGAAGCATCAGAATGTAGAATAAATATTGCTACATGTCACCAAACAAATGAGAGAATGTACCACAAAAAATTTATGACAACAACCATAGAATAAAGAGAAAATGCATCTCCAG--CTGGAAATAAAT-CATTCTACAAC ....:.:.:....:.x...--...:....:.:.......x..:...:x.:.x.:...x.x...:..x:.....:x...:xx:.::.:::.....:.......:.x::......:..:::..x::xx:.......xx:.x:.:.....:....xx.:...------...:x:.:..x:...:.x...--...:.x..x...-:x....x.... 19M2I138M6I21M2D12M1D11M 131/201 65.2% 209/94230402 0.0% 11/201 5.5% 127728479 62486076 +3232 chr4 + 190214555 178917386 178917385 178917479 94 TTTCTTGTGATTTTCTTAGTAACATACATACACACACATAATAATATACATACACACACATTTCTAAACACTGAAGAAAAGATCAAGCCCATTT chr4 - 94230402 38535874 38535873 38535964 55694439 55694438 55694529 91 TTTACGGCAATTTTCTCAACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTA---TGCATACAAGAACAGGAGCATCT ...x:x.::.......:.::..:...:.:....::....:.x....:...........::.x.x.:x.---..x.x.x....x..:.xx...:. 68M3D23M 61/91 67.0% 91/94230402 0.0% 3/91 3.3% 140381512 49833043 +6526 chr4 + 190214555 178919768 178919767 178920030 263 AAATGTATTCTCTTTCACAATACATCTT-----------TTAAAAATGTATACCAAATGAATGTAGTTTTCAAAGCCAAGCAAAGAACAACCTCATTGCATATACCTACAAAAT-TAATAGTGGCACAAAAATTATGCGCAGCCAGCAAAACTA------GCAAAATTAATGTGCTGATTCTGACCAGATTTGCAGAAATGCAAATATTGCAGTTTTCATCTCATATAGTTTGAAGAGATAAACTTTAA--GAGCAACTTTTTTTCTTT-------ATAAAGTAATAATA chr4 - 94230402 51177671 51177670 51177949 43052454 43052453 43052732 279 AAATGCCCTTTCTTTTGAAATACATTTCCCCTAGCCGCCTTAAGAAC----ACTAACAGTAAATAGG----AAAGCTAAGCAAAGAATTACTTTAGTATGTGCACTTATAAAAAAGAAAAGAAATGCAAAAAATCTGGCCAGCTGGTAAAAAGAAAAAAAGCAGAATTAATGTGCCTTTGTGTATCAGATTTGCAAGAATGCAAATACTGCAGCTTTTGG-TCAGCTAGTTT--AGAGATTAATTTCAAACAAGTGACTTTCTTTCCCTTAAGGAAATGGATTAATAATA .....:x:.:.....::x.......:.:-----------....:..:----..:..xx.x.x:...x----.....:..........:x..:.:.x.:::.::..:..:....x-x..x..x::::......x.x..xx....::.:....xx.------...:...........:xx.x:xx.:..........::..........:.....:...::x-...xx......--......x..:..:..--:..::.....:....::.-------..::.x........ 28M11I8M4D16M4D43M1I39M6I60M1D11M2D15M2I18M7I14M 174/252 69.0% 279/94230402 0.0% 38/252 15.1% 127742097 62472458 +3004 chr4 + 190214555 178920626 178920625 178920689 64 CTCCCTTCCCTTCCCCTCTCCTCCCCTCCTCTCCTCTCCTCTCCTCTCTTCTCTTTTTCTTTTT chr4 - 94230402 20485614 20485613 20485677 73744726 73744725 73744789 64 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCT ..:x...:..x:...:x.:..x....:..:..::..:...:.:....:.:.:....::....:. 64M 42/64 65.6% 64/94230402 0.0% 0/64 0.0% 158435012 31779543 +3173 chr4 + 190214555 178959777 178959776 178959894 118 CTTTCTCTTTCTTCCTTCCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTT chr4 - 94230402 23468156 23468155 23468273 70762130 70762129 70762247 118 CCTTTTTTTTTTTTTTCCTTTTCTTCAGCATGGTATTGTCCTTTAATTCATTTTTCTTCTATTTCTGAAATCTCTACCATCTTTCACTTCTTTATTTTCTTTTATTATTTCCTCCCCT .:..:.:...:..::.:.:......:xx.x.xx.x.:x.:....xx...x..:..::.:.x.....xxxx.:::.x.:x......x:.::...x:.......:x..x:.....:..:. 118M 70/118 59.3% 118/94230402 0.0% 0/118 0.0% 155491621 34722934 +3019 chr4 + 190214555 178959788 178959787 178959852 65 TTCCTTCCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 65215666 65215665 65215730 29014673 29014672 29014737 65 TTCCATTTTTTCTTTCTCTTTTTTTTTTTCTCCTCTCCCCTCTTCCTTTATGGCTCCTTCACTTT ....x.::.............:...:.....::::.:.::....:....x.xx..:::.:x.... 65M 44/65 67.7% 65/94230402 0.0% 0/65 0.0% 113744122 76470433 +3557 chr4 + 190214555 178959823 178959822 178959937 115 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCC--TTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC chr4 - 94230402 43081901 43081900 43082023 51148380 51148379 51148502 123 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTC .:.:...:...x.x...:------..x..::..:..:.:::...:.....:.:x.::..:x.x:.:.x..:.--...:xxx.....x.:...:...............x.xx..:::...... 18M6I48M2I49M 75/115 65.2% 123/94230402 0.0% 8/115 7.0% 135877922 54336633 +3759 chr4 + 190214555 178959831 178959830 178959946 116 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT--TTCCTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:..:.:::.....:.:...:x..:...x.x:.:.x..:.xx:...xxx::...x.:...:...............x.--:.:......... 18M6I86M2I12M 77/116 66.4% 124/94230402 0.0% 8/116 6.9% 135877930 54336625 +3549 chr4 + 190214555 178959839 178959838 178959950 112 TTCTTTCTTTCTTTCTTT------CTTTCTTTCTTTTTCTTTCTTTCCTTCCTTCCTTCC---TTCCTTCTC---TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT .:.:...:...x.x...:------..x..::..:.....:..:...:::..::x..:...---....x.:..---...xxx::...x.:...:...............x.xx:.::........ 18M6I36M3I9M3I49M 77/112 68.8% 124/94230402 0.0% 12/112 10.7% 135877938 54336617 +3097 chr4 + 190214555 178968655 178968654 178968703 49 ACTTTTTTTTTTTTTTTTTTTTTTTTTAGAGTCCTGCTCTGTAGCCCAG chr4 - 94230402 27777379 27777378 27777427 66452976 66452975 66453024 49 ACTCTTTTTTTTTTTCTTCTTTTTTGCACAGTCCTCCTCTGTATTCCAG ...:...........:..:......x:.x......x.......x:.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 151191276 39023279 +5662 chr4 + 190214555 178974779 178974778 178974949 171 CCTGGAAGCAAGGGTTTTGACAGAGTAAATGGAGTAGTGTCTTTCTGAAAAGAAGAAAAATCAATGAATCCGTATTCAGCAGAAGCACCCTGTTGGTCTCAATTGTCCAATGCTGAGCTATCAGTTTCCCTCATTG-AACACAGTGCCTGGTACATTTACTTT---------TTTAAAGTG chr4 - 94230402 76120706 76120705 76120886 18109517 18109516 18109697 181 CCTGGCAAGAGGGCTTTCTGCAGTGTGAATGGAGCAGCTGCTGCTTATCGGGGAGGGAAATCAATGACTCAGCATTCATCAGAAGCATCCTGCTGATCACCACTGCCAAGTGCCGAGTCATCGATTTTCCTCCCCGCCAGGCGTAGACTGCTCTATTTTCTTTACAGCAAGCTTTAAAGTG .....x.:x.:..x...:x:...x..:.......:..:xx..x::.:xx::.:..::..........x..x.:.....x........:....:..:..x.x.:..:.x.:...:...::...::...:....x::.-x.x:.:xx.x...x.x:....x....---------......... 136M1I26M9I9M 113/171 66.1% 181/94230402 0.0% 10/171 5.8% 102854073 87360482 +7963 chr4 + 190214555 178975516 178975515 178975828 313 AATCCCCGGCTATTCTATCTTGTCACTATTCTGTTGGGACCATGCACGATAAACTTGCTCTACCCAGCTGTATTTGCAATGCCT-CTTATCTCTTGCCAAGCATGGCTCTGATTTCTGTATACCTTTTTATTTGGACAAGACATTAAAGGTTCTTATCATTTCCATTTCAAAGTGATCTTAGAAAAGTAGAAACACTG-----AATTCAGCTCTTAACAAGACG---------------ATGCCCTTTCTAATATTGTCCTTGAAATAACATCTGTAACT--------TGCCTTCAATATTTTCTTCTCCCAATT----CTGCTGTGGTGTTTTCACCTGCTAGAT chr4 - 94230402 51189783 51189782 51190128 43040275 43040274 43040620 346 AAATCCTTGCCATATTGCTTAATTCTAATTCTTCTGTAGACATGCATTTTGCACTTCTGCCACCCAGCTTTGATTGCAATTTTTTCTTATCATCTGCCAAGTACAGCTCTGATTTCCACATACAACCTTGCTTGGTCAGGACATTTAAGCCTGTTATTATTTCCATTTCAAAGCACCTTCAGCAAAGTAGCAGCAGCAGCAGCAATTCATCTCTTCACAGGATGCCATCTCTGTCTGTAATGACTGTTTCATCAATGTCCAGGACAGAACATGTATAGCCCCAACCAGTGTTTTTCTTTTCTTCTTCCTTCATTTTCTACCACTCTTGAATTTTTGCTTCCCACAT ..x:..:x..:..x:.:::.x:.:x:x.....x:..x::x......:xx.:x....x:x.:........x.:x.......x::.-......x::.......:.::...........:::....xx::..::....x..:......x...x:.x....:...............::x::.:..x.......x.:..x::-----......x.....x...:..:.---------------...x.:x..::.x:.x.....xx..x.x.....x.:..:.:--------..::..:xx.x.:......:::..x..----.::..x.x.x:....::.:.x.:.x.. 84M1I113M5I21M15I41M8I27M4I27M 199/313 63.6% 346/94230402 0.0% 33/313 10.5% 127785733 62428822 +5910 chr4 + 190214555 178983605 178983604 178983746 142 AAAAACACTTTACATTATTTGCAAATGCATCTAATTAGAACACAGGGAATTATGTTATGCATTTGGCAGCAGAGGTATAATGGATGCCAGCTGCAAGATCTTGAACTTCCAAATCTGGAATTTAAA-ATTTCTGAAATAACAA chr4 - 94230402 51192983 51192982 51193125 43037278 43037277 43037420 143 AAAAAAAATCAACATTATTTCTGTACAATTCTTACTCGATCTTGGGGATTTGTATTACACATTTGGCAGCACAGTTGTAACAGATGCCATCTGTAAGGTCTTGAACCTCAAATTTTGGAATTTAGGCCTTTCCAAAACAATAA .....x.x.:x.........x::x.::xx...x.:.x..x.x::....x..:.:...::............x..x.:...::.......x...:...:........:..x..x.:.........::-x....::...:..:.. 126M1I16M 99/142 69.7% 143/94230402 0.0% 1/142 0.7% 127790622 62423933 +9238 chr4 + 190214555 179001992 179001991 179002261 270 TTTTCTTTCACAGTGCAAAGTATCTAAATA-GAAGAAGCTATTTTTGCAGGA--------------ATGATATGGCCTTTTGCTTTCTGTTCCCTGGTCAACTCAAAGTAAA-----------GATAGAGAGCTCCATTAAATCTCTTTTTAATCGTGTAAGTGCCCTGATGCAATTGTCTCACAATACAAAACCATTATGTTAGACATAAATTAAGGCATACACAAGA-------------CATTACAATG-------GTA-------------------TTTAAAGTGAAATATTTATGAAGTGATTTAAATACTAATGACACAGCATTCCTA chr4 - 94230402 51197754 51197753 51198088 43032315 43032314 43032649 335 TTTTTCTTAAAATTGCAGAACTTTTCTATGCAAAGGAGTCATTCTGCCAGGGGGGAGATGTGCAATATTATACAACCTTTAGTTTCACTTGCTATGGTCAGCTGAAACTAAAAATTGCAAAAAGATAAAGTGCTCCATTAAATCCCTGTTTTATTGTATAAGTGCCCTTATGAAATTCTATAGCTATACAGTAGCATTATATCAGACTAGAATTAAGGCTTACAACAGACGTTAAGCCACAGCATTACAGTGAGCAGATGTAAGGCTTATTTAAACCGGATTTTAAAGTGAAATATTTATGAAGTGATTTAAATACTAATGAACAGACACTCCTA ....::..x.x.x....:.::x.:.xx..:-:...:..::...:.xx....:--------------..x...:::.....x.:..:x:x.x.:x......:..x...x....-----------....:..x.............:..x...x..:..:..........x...x....x.x.x:.x.....:x.x......:.:....xx:.........x....xx...-------------.......:..-------...-------------------.........................................xxx::..:..... 30M1I21M14I46M11I106M13I10M7I3M19I54M 201/270 74.4% 335/94230402 0.0% 65/270 24.1% 127804238 62410317 +3099 chr4 + 190214555 179013223 179013222 179013309 87 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAGGAAGGGAGGAAGGAAGGAAGCA chr4 - 94230402 36858294 36858293 36858380 57372023 57372022 57372109 87 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCA .....x.:xx..x.....x...::...:.........:.x..x.:xx....::....::....x:.:::x:..:..:...::.:x.. 87M 55/87 63.2% 87/94230402 0.0% 0/87 0.0% 142154929 48059626 +3024 chr4 + 190214555 179013227 179013226 179013306 80 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAAAGGAAGGAAGGGAGGAAGGAAGGAA chr4 - 94230402 36858294 36858293 36858373 57372030 57372029 57372109 80 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAA .....x.:xx..x.....x...::...:.........:.x.:x.:xx....::.:.:.:....x:..::x...:..:... 80M 52/80 65.0% 80/94230402 0.0% 0/80 0.0% 142154933 48059622 +3594 chr4 + 190214555 179013327 179013326 179013436 110 AAGAAAGAAGAAAGAAAAAGAAAGAAAGAGAAAGAAAGAAACAA------AGAAAGAAAGAAAGGAAGAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGAGAAAGGGAAA chr4 - 94230402 65242461 65242460 65242576 28987827 28987826 28987942 116 AAGAAAGGACAAAAAAAAAAAAAGAAAGATGTGCTAATACTCAAGTCAAGAGGATAAAGGAAGGTAAGAAAGTGAGATGAAGTGAGAAAGAGAAAAAATAAAACAGGTAAGTTAAA .......:.x...:.....:.........x:x:xx..x.xx...------..:.x:..:...:.x.......x:.:.x....x:.......:..:.:.x.:..x::.x...xx... 44M6I66M 74/110 67.3% 116/94230402 0.0% 6/110 5.5% 113770866 76443689 +4215 chr4 + 190214555 179013337 179013336 179013454 118 AAAGAAAAAGAAAGAAAGAGAAAGAAAGAAACAAAGA----AAGAAAGAAAGGAAGAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGAGAAAGGGAAAGGAAAGGAAAGGAAGAAA chr4 - 94230402 30533164 30533163 30533285 63697118 63697117 63697239 122 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAA ...x......:........:..:::::..:.x.....----:.:....x..:.:xxx....x....:xx....x.:.::..x...:..:...::::..::x.xx........:.....x... 37M4I81M 78/118 66.1% 122/94230402 0.0% 4/118 3.4% 148480173 41734382 +3201 chr4 + 190214555 179013359 179013358 179013458 100 AGAAAGAAACAAAGAAAGAAAGAAAGGAA-------GAAAGAAAAAGGAAGAAAGAAAGAAAAGAGAAAGAAAGAGAAAGGGAAAGGAAAGGAAAGGAAGAAAAAGA chr4 - 94230402 59433014 59433013 59433120 34797283 34797282 34797389 107 AGAAAAACAAGAGGGAACAGAGTCAGCAGTGCTTGTGTATGGAATGGGAATGCAGACTGGGAAGAGGAAGAAAGAGAAAGAAAAATGAAAAAAAAGGAAAAACAGAA .....:.x.x:.:.:..x.:..xx..x.:-------.x.x.:..x:....x:x...xx.::.....:.............::...x....::.......:..x.::. 29M7I71M 66/100 66.0% 107/94230402 0.0% 7/100 7.0% 119580345 70634210 +3137 chr4 + 190214555 179037015 179037014 179037076 62 ATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGAGAGAGAGAGATTC chr4 - 94230402 67467717 67467716 67467778 26762625 26762624 26762686 62 ATTCTTTTTATCTTAATCTTTTTTTTTCTTTTTTTTTTAATTCTAGCTAGAGGAAGAAATTC ...x.....x.:..xx.:.........:..........xx..:...xx....::...:.... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 111569298 78645257 +3134 chr4 + 190214555 179037102 179037101 179037168 67 CTGCAACCTCCTCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTATA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xxxx..:...........x.x...x.xx.x........:..:.........:.:..:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 160839976 29374579 +3094 chr4 + 190214555 179045635 179045634 179045710 76 AGCAACAACTTAATCTTTTTTTCGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGACG-----GAGTCTCGCTCTG chr4 - 94230402 56809502 56809501 56809582 37420821 37420820 37420901 81 AGCAAAAAAGAATCCATTCCTTTATTTGTTTGTTCATTTGTTTTTTTTTTTTCTTTTGAGAAGCCAGTTCGTTTCACTCTG .....x..xxx.x:.x..::..::..........:x...x............:........x.-----xx..:..:..... 63M5I13M 56/76 73.7% 81/94230402 0.0% 5/76 6.6% 122236133 67978422 +18879 chr4 + 190214555 179071164 179071163 179071690 527 AAACAGTATGAAAA-AATATGGCTTTGCGAGTCATTTGGTTTGTGATATAATGAACCAAATTGCTTGCTGAAAATTTGGATAAATTCCAGCGCAACAGCCACTATTCAAATTGATAGTGACAGCTCATTCTGAGGGAAAAA---TGTTATTTTCAAATGATTGATATGAACTCAAAAGGGTGTGAAGAACTATAGTGTACTTTGTACATAGGAGTTG-TGACAGGTTGGCACATGTCTAATTCTGATTTAAAACAAGCCAAGGCCCTGCAGTTTCCAATGCCATTAAGCTTATATACCACA-TGAAATTATTTGATTCACTGGAATATTCCACAAAGCAAAATGTGCCAAAATTTCAAAATTAA-AAGTCTGATTTTTATATT---AGACTGGCATGTCATCT------ACTGAAATAAATTCGAAAAATTTCTTCCAGTAATAGGAGGAAAATATTCATACATATTAATCAAACT---TAATTAACACTTAATAAATGCTGCTCTCTAATTGTGAAATTTAAAAGTG-TACCAGGTGAAAGAAAAT chr4 - 94230402 51214890 51214889 51215418 43014985 43014984 43015513 529 AAATATCATGAAAAGAATCTGCTTTTGCAAGTTGTTTTCTTCATAATATACTGTACCAAATGGCTTGCTGAAAAACTGGACAAATTCCAGTTGAACAGGCACTATTCAAATTGATAGTGACAGCTCATTTTGAAAAAAAAAAAATGTTATTTTCAAGTGATTGATATGAACTCAAAGGGGTGTGAAGAAGTATAGTGTTCATATTGCTCATGAGCTGTTGACAGTTTGGCACATCACTAATGCTGATTAAAAACAAGCCAGGACACTGCAGTTTGTATTCATGTTAAGCTTAGAGACCACATTTAAATTATTTGCTTCATATGAACACTCAATACACTAAAATATGTGAAAA---AAAAACTAATTTGAATGACCTTTGTATCCAGAAACT----CAGTATCTATGAGGACAGTAGTGAATGATAAAAA--------AAAACAACTAGGAGATTACTAATGGATATTAATTAAATTGAGCAAGTGACCTTGATGATATTCAGTTCTCTA---GTGAAATGCAGAGGTGTTAAAAGATAGAATAAAAT ...:.x:.......-...x..x:.....:...::...xx..::.:.....x..x.......x............x:....:.........:xx.....x..............................:...:::.....---............:...................:............x........x.x.xx.:.x:.x...:..-......x.........xx.....x......x...........:.:.x.........x:.x.xx::.........x.x......-.x..........x....:xx...:.:..x.:.x.x:.....:..:x....---x....:...-xx.xx...::...:...:---.:...----::x:....------..x.x.:.:...xxx.....--------.:x.xx.xx....:.x..:.x..:x........:...:.---:..x.:..x:.x.xx.x..x.x.:......---.......x:.:.:...-..xx..:.::..x..... 14M1I126M3I73M1I83M1I50M3D9M1I18M3I5M4D8M6I20M8D39M3I30M3D16M1I18M 379/509 74.5% 529/94230402 0.0% 38/509 7.5% 127856274 62358281 +3117 chr4 + 190214555 179073804 179073803 179073875 72 ATACATGCCACCAACAAGCATATATAAAAAGCTCAACATCACTGATTATTAGAGAAATGCAAATCAAAACCA chr4 - 94230402 57840180 57840179 57840251 36390152 36390151 36390223 72 ATAGATGGAAACAGCAGATATCTATGGAACGGGTAACATCCCAGAGTATTAGAGAAATGCAAAGCAAAAACA ...x...xx.x..:..:::..x...::..x.xx:......x.x..x.................x.....x.. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 121233624 68980931 +3087 chr4 + 190214555 179078125 179078124 179078175 51 AGTATTTCAGCATGCACAACAAAAAGACAAACAATAACAGCAACAACTAAA chr4 - 94230402 79230820 79230819 79230870 14999533 14999532 14999583 51 AGTGTTTCAATCTTCAAAACAAACAAACAAACAATAACAACAACAACAAAA ...:.....::x.x..x......x.:.............:.......x... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 99847305 90367250 +3107 chr4 + 190214555 179117785 179117784 179117847 63 ACTTTTTTTTCTTTTCTTTCTGTTTTTTGTTTTTTGTTTTTTTTTTTTGAGACAAAGTCTCAC chr4 - 94230402 56917971 56917970 56918033 37312370 37312369 37312432 63 ACTTTTTTTTCTTCTCTTTCTCCTTATTTTTTCATTTGTTTTGGTTTTGAAACAAATTCATAC .............:.......x:..x..x...:x.x.x....xx......:.....x..x:.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 122199814 68014741 +21299 chr4 + 190214555 179118961 179118960 179119587 627 TTATTGATTTATTAGTTTCTTTTTAAAAATGCATCTTCTAGCATCACTGCTACTTTAAATAGATTTGAAACAGATTTCTAATCAAATTTACTCAGGTAACCTTTAATAGTTTAAACAGGTTAATTTTTAATGTCATTTATATTTAAAAGGTGCTGAAAATATTATAGCATTAAATATTTAATAACATTGTTAC-AAAATTTTAAGTAAGTCAAGCCCAAACCCTAGAAT-CATAGAGATCACTAC-TGCTGGCTCTCGAAACATCAAACAAGTCCATTGAGATTTTTACATTTTTTTCATAATTTAATAATGTGGTTTAAGTTGTTGCTAGCTTTGCAAAAATATAGTGTAATAGCACAGATGTGACTGTTAATTAAAAAGTCTCTTGTGGGAGCAAATGGGTTTCTGGGTGATG-TTTTGAGCAAGATTATGTCATTTAGAAAAAATTCTGAGTACACAA----------AATCCTGAACTGTATGTTCCTAAGAGACTACTGCTTAAAAAAAAAAAAAATCCCAACCACCCTGCAGAGTGAAGAGAAGTAAAGGTAATTTGCAGATCAG-----CCAGTGTTTTTATATTTCCTGTAAATGAGCCATCTCGCTGCCAATGTAAAGATTTGTGTTTAGTTTTTGT chr4 - 94230402 51229121 51229120 51229734 43000669 43000668 43001282 614 TTGTTTTTTTTTCAGTTTTCTTCACAAAAGACATCCTTTAATATCAAGGCATCTTTAATTGGCTTTGAAAGTTTATTCTTATAGAATTTTCTGAGATAAACTTTAACAGTTTAAACAGATTAAATTTTAATGTCATTTATGTTGGAAAGGTGTTCaaaatattatactattaaatatttaataaCATCATTATGGAAAATTTAGCTATTTCCAAACCAGACTCAGGAGGACAGAAGTATCACTGCACACTAGTTTTTCAAGTATTAAAGAGGTCTACTGAGATTTGTAC-TCTTTTTCAAAATTTAATAATATGGCTTAAGTTGCTGCTAACTTTGC-AAAATACAGTATTCTTGCACAGATGTGACTGTTAATTAAAAATTCTCTTGTGAGTGTGAATAGGTTTCAGGGAGATGTTTTTGTTCATGTTAACATCATTTTGGAAAA--TTTGAGTATTCAAGCTTTTGTATATTCATAAACATAATGCACCTAAAACACTACAGTC-------------AGTCCTAACTACTGCACAGAATGATAAGA---AAATCATATTTACATGTAAGTGCCTTCAGTG-GCTTATATCT-----------ACAATATTGCTGTCACCAAAGGAATTTATCTGTGGTTCTTGT ..:..xx...x.:.....::..:xx....x:....:.:..::....xx..xx......x.:.x.......xxxxx....x..x:.....x..x..:...x......:...........:....x................:..x:.......:.x...........x:...................::...:-:...x....:x..xx..x.:x...:..:.x:..:x-..x.::x......:.-::..:.:.:.:x..::..:...x.:...:.:........x...-.:.......x...........:...:........:.....:......-......:...:.xx.x..........................x.........:.x.::...:......x...x....-.....xx..x.x.x.::......x.:....--.:......:x...----------.x..x.:...xxx...:x.....:.x.....x.::-------------.:...:...:..:x::....:...x:...---...xxxx....:..x:.x..-----:.....-x:......:.-----------:.x..x.:....:..x::x.:::....:.x.x.:...:.... 193M1I35M1I15M1I43M1D47M1D77M1I30M2D13M10I35M13D29M3D20M5I6M1D10M11D42M 429/595 72.1% 614/94230402 0.0% 51/595 8.6% 127889840 62324715 +5496 chr4 + 190214555 179129826 179129825 179130013 188 TCATCAATTTAAGAATGGA-----GAGTGCATCACATAATGAGTTTATGTCTGTATCTCTCTTACCAAATGGATATAAAGTGACATCTCAGGGGTCTGTTAATGAGATTGTCTCATGTAAGGGAATCTGGTAATGGGATGCTACCAAATCTGATTATTTAGAGATAATGTTAACA-AAATTAAATTAATTAATG chr4 - 94230402 51237443 51237442 51237630 42992773 42992772 42992960 188 TTGTCAGTTTAAGGTCTGAAGCTGGATTGAAGCACACAGTGAATATATAGCTAGGG------TACAAAATGTGTCTAAAGTGACATCCTGAGGCACAGTTAATGGGACTGTCTTATGTAAGGCTATCTGGTAATATGATCATCTCTAATGAGATTACACAGAAGTAATCTCTTTATAAAATAAATAAATGAATG .::...:......:x:x..-----..x..x.x....:.:...:.x...:x..:x:x------...x.....x:.x............::::..xx.x.......:..:.....:........xx..........:x...xx.x:.x...xx.....:x:...::....x.:xx:.-...x.....x...x.... 19M5I32M6D113M1I18M 124/182 68.1% 188/94230402 0.0% 12/182 6.6% 127892383 62322172 +3846 chr4 + 190214555 179130681 179130680 179130787 107 TTCTTATATGTAATATAATATGTATTATTATATTGCATATGTAATATAATATGTATTATAT------TGC--ATATGTAATATAATACGTATTAT----TATATTGCATATGTAATATA chr4 - 94230402 51771645 51771644 51771763 42458640 42458639 42458758 119 TTCTTATATATAATATAGTATTTAGTATTATGTAGTATATTTGATATAATTGTAATTATATATAGAATGCTTGTATATAGTGCAGTATACAGTATTTTATATATCAGATATTTGATATA .........:.......:...x..x......:.x.:....x.:.......xxxx.......------...--:...:..:.::.:..:::.x...----.....::x....x.:..... 61M6I3M2I23M4I20M 79/107 73.8% 119/94230402 0.0% 12/107 11.2% 127359036 62855519 +26334 chr4 + 190214555 179135606 179135605 179136236 631 ACTAGTTTAAATTATTCATTTCATATCCTAGTGCTTTTTTCCCACATGTG-----------CTACTTTATT-------GTTTTAAACTAGTTGATTTATAAAAATGTCATCTGAATAGTGCAAATTAATGATTCCAGCAAAACACATTTGCGATACCTTAGGTATGTGACAGGCAATTAAAAAAAGTTGTATTGATTTGTCTAAAATGTTAAATGACATAATAGCCATACAGTAAAGTATTGAATAATTTAAGTAAATCAATGTTTTCTGTTTTCTGAATTTTCTAGGTGTACAAACTATCTTGGGTGCTAAGGTAAATCAATATAAT------------AAAATAAAAATGAAGCGGTTTATAATGATGAATGTATGGGTTGATAATAACCAGAGGTAGAATCTCATTTAGCCATTGTAACAAACAACTTCCAGGCAT-TTTTGTGCACTATTCCCATCAGAAAACATGGTATTATAGAGTCAATTGATTTTAGCACTTAAACAGCTTTTCATTTGCAAGACACCTAGCCTCAGTATAAACTA-AACCTTTCCCAGAGTGTCATTAGTTATGGCTTGATTTAGAATGATAATACATATTTACTACCATTAGAGCCATTTTGTGTGTTTTATGTGGTTTGTAAATAATGCTATATTTTATGAG chr4 - 94230402 51243869 51243868 51244517 42985886 42985885 42986534 649 ACAAACTCAAATTATCTATTTTAT-TTGTAATTATTTATGCATTTATATAAAGATAGGCAACTCCTTTGTTAAAAACAGTTTCAAAATAGATCATGTATTAAA-TATCATCACCTTAAAGCACATTAATGATTCCAAACAAGCACATTTGCAA-ACCTACTGAATAAGGAAAGCAATTTTTTAAAGCT-TATTGATTTGTCTAAAGTGTTAAATGACATAATGGCCATACACTAAAGCACTGAATAATTTAAATAAATCAA-------TGTTTTCTGAATTTCATACATGTAAAAACTGTCCTTGGCTATAAAGTAAATCaataaaattttaaaaagaaaaaaaaaaaaatGAAGTACTATATAATGATAAATGTATGGGCTGACAATAATCAAAGCCAGAAACCCATTTTGTCATTGTAACAAACAACTTCCAGTCATCTTTTCTACATTACTCCCATCAGAAAACATGATACTATATAGCCAATTGATCTTAGCACTTAAATAACTTTTCA-CTGAATGACACCTCACTAAAGTATTAAATATAACTTTTTTGAAACTATCATCATTTATGACTGGCTATAGAATAGATATGCATATTTGCTACTATAAGAGCTATTTCATATACCTTA--TGGTTCCTAAATGGTGAAATAGACTATAGG ..x.::.:.......::....:..-.:x..:.xx...x.x.x:x:..:.:-----------..x....:..-------....:...x...x.x..x...x...-.:.....xxxx..:x...x.............:xx..:.........:.-....xxx.x..:x.:x.:......xxxx....:.-................:................:........x.....:.:............:........-------..............:x..x:....x.....:..:.x..:xx...:...........x...------------....x..........::x.x.........:..........:...:.....:..:..x:....x.:.....x.:......................x...-....x.:..:..:.................:..:....x..:........:............:.:.......-:..x.x.......x:.:xx.....x..x..-...:...::x.:.x.:....:.x.....:..x.x.x......::xx..:.......:....:..x.....:....::.:.:::...--.....:x.....::..xx...xx:...::. 24M1D25M11I10M7I25M1D49M1D34M1D72M7D60M12I99M1I73M1D30M1I86M2D30M 466/617 75.5% 649/94230402 0.0% 46/617 7.5% 127891737 62322818 +3288 chr4 + 190214555 179138265 179138264 179138330 66 TGGGTGACACAGCAAGATTCCATCCGCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAGAGGTATAA chr4 - 94230402 59404604 59404603 59404669 34825734 34825733 34825799 66 TAGGTGAGAAAAAGAATTGCCCCCCTCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAAAGACACAA .:.....x.x.:x:.:x.x..x:..x..........x................:...:..::.:.. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 119733661 70480894 +3290 chr4 + 190214555 179149030 179149029 179149093 64 TTTTAAATATTTTCTTTTTTTTTTTTTTCTTTTCTTTTCTTGAGACG---GAGGCTTGCACTGTCAC chr4 - 94230402 30600231 30600230 30600297 63630106 63630105 63630172 67 TTTTAAGTATTTCCTCTTTTTTTTTTTTTTTTTCCTTTCTAGAGCTGCCCCAGGCTTTCTCTACTAC ......:.....:..:............:.....:.....x...x:.---x......x.x..:::.. 47M3I17M 50/64 78.1% 67/94230402 0.0% 3/64 4.7% 148548799 41665756 +3120 chr4 + 190214555 179150766 179150765 179150824 59 TGAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGTGCTCTTCATAGTGGTCCATGGATCAC chr4 - 94230402 65527924 65527923 65527982 28702421 28702420 28702479 59 TGAGGGAAAAAAAAAAAAAAAAAAAGCGGCTGTGCTCCCCATAATGTTGCATGTTTTAC ...:::...................:x:..x......::....:..x.x....xx.:.. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 113622842 76591713 +3039 chr4 + 190214555 179160720 179160719 179160778 59 CTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.:.......x.:xx...x.xx..........::.:.........:.:....x.:.. 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 160963581 29250974 +15300 chr4 + 190214555 179182801 179182800 179183180 380 CTGTTGGTTGGATAAATTTGATTTTCAGAAACCTTGACCTTGTTGATAATGGGTAGTGAGCAGATTTTAGATCATGTAGTTAG-TTTTGCATGTATTACACACCCATCTGCTTCTCCATCTGGCAGCAGA-----------------------CACAGAAGTGTTATGTACATTCTTCTCACCAACACCCCAATTGTTAGCTTCCTGCTGATAGCCCCAGTATAAGCTTCA-TTGGGTAATTATTTCAGGCAGAAAACAACCAACCCACATGTTCAAGAATAATTACTAGTTCAATTAACTAACCAAAAACAGGTGATATT---TTAGTGTCCAGGAGTAGAAACAATTTCAATTTCTGCAGCACTTCAATAAAAATATTTAGATAGCAGATGTGCTTTTTAGTACCT chr4 - 94230402 51250688 51250687 51251085 42979318 42979317 42979715 398 CTGTAGACTAGGTACAACTGATTTTTCAACATTTCACTGTGGCTGCT----GGCTGTGAGCTGA-----GATCATGTTCTTAGATTTTGTGTACATTACACATCCATCTGTTCCTCCATCTGGCAAGACaaataaataaataaataaataaatCATAGAAATGCTTTCTGAACTCTCTTCACCAGTACACCAGTTGTTAGCTTCCTGCTGATAGCCCTGGTACAGACTTCAATTGGGTAATTATTTCAAGCAGAAAATAGCCAACCCACATGTTCAAAAGTAATTATTAGTTCAATTAACTATCCAGCAATGGGTAATTTTTTCTTAGGATGCAGAAACAGAAAT-GTTAAAATATTTGTGTAACTTTAATGTAAGCATTTAGAGAGCATCTGTGTAACTTTATACCT ....x.::.:.:..x.x:.......:x:.x.::.::x:x.x.:..x.----..:x......x..-----........xx....-.....::.::........:.......:.:............:x.x.-----------------------..:....:..:.x.x.:x.:...::......::..x...:........................::...:.::.....-................:........:.:.................:.:......:...............x...:x..::...:..x..---....x:.x...:.::.....:-:..xx...x.:..::xx....:...:x..::.......x....xx....:xx:..x:..... 47M4D13M5D14M1I46M23I78M1I89M3I21M1D62M 271/370 73.2% 398/94230402 0.0% 38/370 10.3% 127932113 62282442 +3170 chr4 + 190214555 179185891 179185890 179185948 58 CAAAACAAACAAAGAAACAAAAACAAAAAACAAACAAACAAAAAAACTGGAGCTTGTG chr4 - 94230402 13139346 13139345 13139403 81091000 81090999 81091057 58 CAAAACGAAGAAATACACAAAGAGAAAACATAAACAAACAAAGAAACCAGAGCATTTG ......:..x...x.x.....:.x....x.:...........:....::....x.x.. 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 166046545 24168010 +3346 chr4 + 190214555 179194665 179194664 179194764 100 AAATTGTCACTTATTGCTTCTTTAAAAAGTAGTTTAATAAATGGTAAAAAAAAAAAAAAAAAAAAAACAGGGTAAATA---CTGAAAGTGTTAATTTGCTTTA chr4 - 94230402 54585520 54585519 54585619 39644784 39644783 39644883 100 AAATTCCTTACTACTCCTTTTTTAAATAGCATTTTCCTGAAAAGAAAAAAAGAAGAAGAAAAAAAAA---AGTACATGCTTCTTAAAATGTTAATTTCCTCTA .....x::xx:..:.x...:......x..:.x...xx.:..x:.x......:..:..:.........---:...x..:---..x...:.........x..:.. 67M3D8M3I22M 69/97 71.1% 100/94230402 0.0% 6/97 6.2% 124609145 65605410 +3036 chr4 + 190214555 179221059 179221058 179221107 49 TTTTTGTGGGGTTTTTTTTCATTTTTTTGTTTGTTTGTTTTGCTACAGG chr4 - 94230402 56149523 56149522 56149571 38080832 38080831 38080880 49 TTGTTGTTGGGTTTTTTTTTGTTTGTTTGCTTGTTTTTTTTACTCCAGG ..x....x...........::...x....:......x....:..x.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 123071536 67143019 +3522 chr4 + 190214555 179232642 179232641 179232796 155 TTCTTTGTGATCCTTTCAGGCAGAATCTAATTCAAGAAAGAAATGTGCCAG-TAATCT-----TAAAGAACCTAATGTGTTTACTTTTCCAGTAACATTTCCTAAAAAAAAAAAAAAAACAAAAAACAACAAAAACTTAATAACCAAAAAAGAACTGTGAG chr4 - 94230402 13071402 13071401 13071536 81158867 81158866 81159001 135 TTCTTTATAATACTCTAAGTTA----------CAAGTAAGAAATGGGCAAGATGATATCCCTCTGAAGA------------TACTGTGCCG----CCCTTCTTAAACAAAACAAAAAAACAAAAAACAAAAAAAACTTCACAGCTGTAGACAAAATGTAAG ......:.:..x..:.x..x:.----------....x........x..x..-.:..x.-----.:....------------....x.x..:----.x:...:....x....x.................x........x.:.:.::x.:.x:..x...:.. 22M10D19M1I6M5I6M12D10M4D66M 96/129 74.4% 135/94230402 0.0% 32/129 24.8% 166161240 24053315 +9348 chr4 + 190214555 179252756 179252755 179253254 499 GTGTTGTCACTGCCTTTAGTTTGTCAATTTGCAAAATATTTTTCTTGCAACAC-----GCTCCATTTTTTGTC------ATTTTCATATTTGGGGAACTACATTATAGGAAATTACTTTTGTCCAAATGTCTACAATTAGTG-AAAATGTAA--------ACGTTGGCCCTCAAATATTTTAACTACAAAATCTAGAGATATCTTAATAATAACGAATTTTGATGAAAAATGCTGTCGTGTTCTATAAAATAACTTGTCAGTGC-CTTTTTATCATTCAATAGTGATCAGATAAGGAATCAGTTTTC--TTTATAGTTTCAATGAAGGCATATTTTAGATTAGTATATTATTTAAATGTGCAAACTACAAATTGACAACATCTGGTACTTTAATGAAAGAGGATATGGCACTGGTTGTAAGATCAAGCTTTTAGGATTTGACACAGGATCTTTATGC--ATTAAAAATAGCAATGATTAATTCAAGGC--TGAAACTGACTGCAGTTTGATGCCCTT----TGAACTTTG chr4 - 94230402 51258044 51258043 51258545 42971858 42971857 42972359 502 GTGATGTTATAGATTTTA--TTGCTAGTCTGCAAGGTA--------GGAAAATAATTAGCTCTACTTCTAGTCTTCTCTATTTTATTCTTTTGTGATGTATAATGTAGTGTATT----TTATCTAATTGACAAGATTTAATATGAAATCTAAGCTAAGAGACAGCTGCATTCACACGCAGGATCTACTGAATCCAT--------------TAACTATTTCTAATTAAAAATGCTGTCAAAATCTTACTAGCATCATGTCACTTTGCTATTTATTATTCAACAATAATAGTCTGAAAAAACACACTTCCGTTTATAATTCTGTTGAGGCAGCATTTATAATTAGTATGTTATTTGAAAGTATATATTACAAACTGACAACACCTGGTAAATTAATGCAGGCTGATGTGACACCGATAGCAAGATCAAGGTTATAGGTTTTGAAATAAATCCTTTACAACGAATAAAAATAATATTGTGCAATCCATTACAAAAAAATTGACTGCATCTTAATGTTTTCAAAAAGAACTTTG ...x...:.:x.x:....--...::.:.:.....::..--------.x..x.:-----....:.:..:.x...------.....xx.x...x.x..xx..:.x.:...x:x...----..:..:..x..x.x.x.x...:.:-:....x...--------..:x:x..x:...x.:::xxx.x....x:....:.x--------------....x.x..:.:..x............:x:x...xxxx.::.x.x.....x.x:-..x.....:......:.:.:..x:xx.:.::..x..xx:...--......:..:::x...:.xx::....xx:........:......:..x..::.x.:......:........:......xx......x.:.xx...:..:...:.:.x.:.........x..x....x.....x.:.::x:.....::x--.x........::.x..xx:...:..xx:.--x:...:........x:..:...:::.:----x........ 18M2D18M8D7M5I15M6I35M4D24M1I9M8I36M14D54M1I42M2I148M2I29M2I27M4I9M 306/471 65.0% 502/94230402 0.0% 59/471 12.5% 127994712 62219843 +3060 chr4 + 190214555 179254182 179254181 179254315 134 AACATAGTT-----TAGTACTTAAAAGAGGGCATCATAAGTCATTAATTTTATTCCCAATTTCTATATCTCTGAAATGCTTTCAGAATAGCTTCTTGTTTTTTTTTTTTTTTTTTTTGAGAAGAAATCTCACTCTGGCA chr4 - 94230402 39160336 39160335 39160470 55069933 55069932 55070067 135 AACATCGTTGTCTGTAGCACTTCTTAAAGCACAACAG----CCTTGAATTCATTTCCACTGCATGTGTTCCTGCAATAAATCCAAAGTAGATGAATATGATTTTTTTTTTTTTTTTTGAGCAAAATATTTTCTCTTGTA .....x...-----...:....xxx.:..x:..x..x----.x..:.x..:...:...x.x:x.:.:.::...x...:xx.:..:.:...x.xxx.:.xx....................x.:..xx:.:x....x.:. 9M5I23M4D98M 84/130 64.6% 135/94230402 0.0% 9/130 6.9% 140093846 50120709 +3403 chr4 + 190214555 179271916 179271915 179271982 67 TGCCTTCTTAGGGAAAAACAAAACAAAACAAAAACAACTCCAAGGCATTTCTATGAGACTATGAATT chr4 - 94230402 61976641 61976640 61976707 32253696 32253695 32253762 67 TGTCTTCTTGGGGAAAAACAAAACAAAACAAAAAAACCCCCAACTCTTTAAAATGCAATCATGTATT ..:......:........................x.x.:....xx.x..xxx...x:.::...x... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 117295275 72919280 +3577 chr4 + 190214555 179306230 179306229 179306308 79 CTGCAGGCTTGAACTTCTGGGCTCAACCAATCCTCCTGCCTCAGCCTCCCAAGTAGCTACAACTACACGTGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACAC--GTGCACCAC ..:...x.:x:.:........:....x::x.:.x.xx.x........::.........:x........--......... 68M2D9M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 161109104 29105451 +3258 chr4 + 190214555 179358493 179358492 179358572 80 GGATGTCTAAATAAACATGAGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAACAGAAGTAGCATTCGTTG chr4 - 94230402 3302506 3302505 3302585 90927818 90927817 90927897 80 GAATTGCTAGATATATAGGAGGAGAAGAAAAAGAGAAAAATTGAAAGAAAAAAAAAAAAGAATGGGGGAGGAATTTTTTG .:..xx...:...x.:.x....:.x.:.....:.:.....xx:...:..........x....::.::.x:.x...:x... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 176055987 14158568 +3028 chr4 + 190214555 179358496 179358495 179358563 68 TGTCTAAATAAACATGAGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAACAGAAGTAG chr4 - 94230402 13722700 13722699 13722765 80507638 80507637 80507703 66 TATCTAATTCAGTTTGGGGG--AAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAG .:.....x.x.::x..:...--........:.x..............::..x.:..:.:x:....... 20M2D46M 49/66 74.2% 66/94230402 0.0% 2/66 3.0% 165635796 24578759 +11078 chr4 + 190214555 179362110 179362109 179362701 592 TGACCTGATAAGATCTCATCGGCAGTCCATAATCTCCGGCTTGGGCAAGACTTTTAATCTG-TGCAGCGCATAGTAACTTCTCCACCTACAGGCCTGACATGTTTCACTACGGCAGCATGAAAATCAGTTT-ATTTATGTTGAATGCATGACATCTGACAGCACTTCCCCACTATATAAGTGCCTAACAGTTTATCAAATGTCACGTTTGAAGTTATGTCAATAATCCCTGTCTGTGCCTGATGCTTCTGCAACTGTGAATGACCTGATCTTTTAAAATATCATCTTGC-ATACTGCTATTAGACAGTAGTACTTTTAGCT-TTTTAC---------TTTTAAATAAAAATCTATGCCTC-TTGACTACAGCTGCCTATCCTTTGGAAATG---ATATTTTTTCAATTACTGTAGTAATTCTCAGTATAAAATATACATCTAGAGAATACACAGAGTTTGTTGGATTAAATATGAGTTTTAATTCTTCACATTTTAAAAAATCCCTCAGACATCTGGTTTAGCAAGATCTAAGAAAAAAAAACATTTTGCTGTCTATCATTTGCCATCTTTG-TGATTCTGCAGAGTTTAAAATTTAGTTTGATTGCATT chr4 - 94230402 51298680 51298679 51299264 42931139 42931138 42931723 585 TGACCTGGGTGGGCCTCTTTAGCACCATGTTATCTCTTGTTCAGACAGACCCATAAAACTACTACCATGTTCACTGACTTTACTGCTTTTGTGCTTGATAGATTTGGCTGTTGT-GCTTCTGGAACAGTTTCATTTATGTTTTATGCATGGCACCAAGTAATGCTTTCTTCCTGAAGCAGTGACTAACAGTTTATCAAATGTCAAGCTCG-GTCTATGTCAATATTCC----CCAAGTCTGCTGCTACTGCAATTGTCAATGGAGTAAGTTTTGACAAACTCATTTTACAAGAGTGCCATAACACAGTAGCATTTTTGATTGTGCTACAGTAGAACTTTTTATAAAACAATATACAGATCTTTGTCTCCAGCAGTCTTGCCTGCAAAAACAACTACAGTTTCTCAAATACCGT----TTTTAGAATGTAAAATAGCTATCCAGATGATCCA----------TGGTAAGAAATTATGTTTCTTTTCCCAACGTTTT-GGAAATCTCTTGGAAATCAGGTTCAGCAAGCTGCAATACCACA----GTTCTGCAGGATATCATTTGTCACTTCTATTGCTTCTGTTAAGTTTAAAACTGACTTTTATTACTTT .......:xx:.::...x.::...x:x::.x.....:x.:.::.:..::x.:x.x..x..:-.:.x::.:x:.x.:....:x.::.:.x::x..:...:.x:...x:..::x.:-..x.xx::.x......-.........xx.......:..:.x:::.:::...:.::x..:x.xx....x.....................x.:.:.-:x:..........x...----.::x.:...x....x......:...x....:xx.:.x:...x.x..xx....:..:.-.x.x...:..x.x.......:.:....:::.-.x:...---------.....x.x..x...x..::xx..-...x..x....x.:..xx...x:::...::---.:.x...:....x...:..----x..:xx.:.:.......xx:...:...x:..x..----------...xxx:..xx.:x....:xx...::x..:....-::.....:..::..x...x....:......x.x:..x.xx.x.----:..:...x.xx.........:..::.:.:-..x.....:x:.........:.x.x...x...:.x.. 61M1I52M1D16M1I78M1D17M4D57M1I31M1I6M9I23M1I30M3I19M4D34M10D34M1D43M4D29M1I37M 357/567 63.0% 585/94230402 0.0% 43/567 7.6% 128063430 62151125 +3094 chr4 + 190214555 179391864 179391863 179391900 37 GAGAGGAAAAAAAAAAAAAAAAAAGCATTTTCCAAAT chr4 - 94230402 4540007 4540006 4540043 89690360 89690359 89690396 37 GAGAGGAAAAAAAAAAAAAAAAAAACAATTTCCAAAT ........................:..x......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 174851857 15362698 +3802 chr4 + 190214555 179401187 179401186 179401269 83 CTGCAACCTCTGCCTCCCAAGTTAAAGCAATTCTCATGCCTCAGCCTTTCGAGTAGCTGGGATTACAGGCGTGCACCACTATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:::...x...::x...x..x.x...........:.........:.:....--...........:.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 161204061 29010494 +3033 chr4 + 190214555 179401427 179401426 179401490 64 TTTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTGACAGAGTCTGGCTTTGT chr4 - 94230402 52825908 52825907 52825971 41404432 41404431 41404495 64 TTTTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTTATGACAAGCTTTAGCTTTAT ...:.:.x.:......:.:x...:...:x.......:...x...x.....::x.:.:.....:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 126575519 63639036 +3463 chr4 + 190214555 179401528 179401527 179401610 83 CTACCACCTCCGCCTCCCAGGTTCAAGTGATTCACCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ....x:..:xx:x..:.::..........x.....xx.x........::::.........:.:....--..:.::....::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 161204402 29010153 +3810 chr4 + 190214555 179409596 179409595 179409690 95 AAAAAAGAAGGAAGAGAGGAAAGAAAAGAAGAGAAAAGCAAAGCAAAGAGAAGAACAAATGAAAAATAGCAGGTTAAAAATGAAAGATCAAGTTT chr4 - 94230402 67066628 67066627 67066722 27163681 27163680 27163775 95 agaaagaaagaaagGGAGGAAGGAAGGAAGAAGGAAAACTAAAAACAGAAAAGAAAAAATAAAAAGGAGTAGAGTAATAGTGAGGTGCTGAATTT .:...::...:...:......:...:::.::..:...:.x..:x.x...:.....x....:....:x..:..:x...x.:...::x::::.:... 95M 60/95 63.2% 95/94230402 0.0% 0/95 0.0% 112342968 77871587 +3026 chr4 + 190214555 179454956 179454955 179455013 58 GTTTTTGTTTCGTTGTTGTTGCTATTGAGTTGTTTTGGTTTTTTTTTTTTTGAGATGT chr4 - 94230402 44858313 44858312 44858369 49372034 49372033 49372090 57 GTTTTTTTTTTGTTGTTGCTGCTGTTGTGTTGTTTT-TTGTTTGTTTTTTTGACTTGT ......x...:.......:....:...x........-x.x...x.........xx... 36M1D21M 47/57 82.5% 57/94230402 0.0% 1/57 1.8% 134596643 55617912 +3080 chr4 + 190214555 179461330 179461329 179461413 84 TATGCAAAAAGTAAAAAAAGAAAAATACAAAAGAACAACTTCAGTCCCCTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 78553554 78553553 78553637 15676766 15676765 15676849 84 TAAGCACTGGGTAAAAAATGTAAAAAAATATGGCACTGATGCAGTGCCTTATTATTTTTTTTCATATGCTTTTTTTTTTTTTTT ..x...xx::........x.x....x.xx.x:.x..x:x.x....x..:...x.........:x.x.x:............... 84M 59/84 70.2% 84/94230402 0.0% 0/84 0.0% 100907776 89306779 +8599 chr4 + 190214555 179468026 179468025 179468171 146 ATTTAGGGCACAGGGTGGAGTTAGGCTGACATGTGACTGATGAGGTGGAAGTGTGAGTCTGAGGGCCATTGAACACAGAGAA-TTTCCCAATGTATCATAATTACAGAAACACCTGTGCTGAGGAAT-TTGTGCTGAATCAGAGAAAA chr4 - 94230402 51328648 51328647 51328795 42901608 42901607 42901755 148 ATTGAGGGCACAGGGTGGAGTCGCACTGACACGTGACTGATGAGGTGGAAGTATGAGTACGAGAGCCATTGAACACCATGAAGTTTCATAATATATTATCATTATGAAAACACCTGTGCCGAAGGACATTGTGCTGACGCACAGAAAA ...x.................::x:......:....................:.....x:...:............x:x...-....x:...:...:..x....:::............:..:.:.:-.........xx..x...... 82M1I44M1I20M 118/146 80.8% 148/94230402 0.0% 2/146 1.4% 128139378 62075177 +4009 chr4 + 190214555 179468062 179468061 179468145 84 CTGATGAGGTGGAAGTGTGAGTCTGAGGGCCATTGAACACAGAGAATTTCCCAATGTATCATAATTACAGAAACACCTGTGCTG chr4 - 94230402 86520735 86520734 86520818 7709585 7709584 7709668 84 CTAAACAGATGGATGGGAGAGTCTGAGGGCAATTAAGCACAGAACATTTTTGACAGTTTTACAGTTTCAGAAACACCTGCGCTG ..:.xx..:....x.x.x............x...:.:......:x....::x.xx..x.:.:.:..x............:.... 84M 61/84 72.6% 84/94230402 0.0% 0/84 0.0% 92947327 NA +3124 chr4 + 190214555 179472476 179472475 179472554 79 GTGACATGGGTTAAGTTACTCATTGTCATTGAGCTTCTGTTTTTTGTTGTTGCTGTTGTTGTTGTTTGTTTGTTTTTCA chr4 - 94230402 70105215 70105214 70105290 24125113 24125112 24125188 76 GTGGCAAGG--TGGGTGCTTTATTATGAAAGAGCTG-TGTGTTTTTTTTTTGTTGTTGTTGTTGTTTGTTTGTTTTCCA ...:..x..--.::..xx:.:...:.x.xx.....x-...x....x..x...:.......................:.. 9M2D25M1D42M 58/76 76.3% 76/94230402 0.0% 3/76 3.9% 109367261 80847294 +4482 chr4 + 190214555 179475539 179475538 179475681 143 TGTACCTAAGCTTTATAAATGACATCTCCCATGTCATCAATAAAAATGATGTACATCTTATTGTGGATTTATTTAGCAAACAATTCCCAGAAATCACCTTTATTACAGGGAATAAAACAGATGTGTAACTCCCTCTTTTGGAT chr4 - 94230402 51357485 51357484 51357622 42872781 42872780 42872918 138 TATGCTGAGGTTACAGAGATGGCAACTACC---TTATCCATAAAAATGATGTACTGCATCCTGTGGAGTTACTCAACCAGCTGTTTCCAGAGATCATGTTTGCTACAGAGTGTGGA--AGATCTGGGAATCCTTTTCTAGGAT .:.:.:x.:.:.x:.x.:...:..x..x..---.:...x...............xx.x.x:......x...:.:.:.x.:.x:..:.....:....:x...::.....:.x:.::.--....x..x:.x...:.:.:.x.... 30M3D83M2D25M 91/138 65.9% 138/94230402 0.0% 5/138 3.6% 128118054 62096501 +3117 chr4 + 190214555 179483525 179483524 179483578 54 GAGGAAGAGAGTTTTTTGGTGGGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTT chr4 - 94230402 79423423 79423422 79423476 14806927 14806926 14806980 54 GGGGGAGAGGTTTGTTGTTTGGGGTTTTTTGTTGTTGTTGTTTGTTTGTTTTTT .:..:....:x..x..xxx....x...:.......................x.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 100060102 90154453 +3330 chr4 + 190214555 179483538 179483537 179483579 42 TTTTGGTGGGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 - 94230402 64800058 64800057 64800099 29430304 29430303 29430345 42 TTTCAGTGGATTTTGTTGTTGTTGTTGTTTGTTTGTTTGTTT ...::....:....x........................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 114683480 75531075 +3153 chr4 + 190214555 179483545 179483544 179483579 35 GGGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTTT chr4 - 94230402 48695497 48695496 48695531 45534872 45534871 45534906 35 GGGTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTT .......:........................... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 130788048 59426507 +3399 chr4 + 190214555 179483546 179483545 179483589 44 GGTTTTCTTGTTGTTGTTGTTTGTTTGTTTGTTTTTGAGGCAGG chr4 - 94230402 12234323 12234322 12234366 81996037 81996036 81996080 44 GGTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTTAAGAGAAG ......:.............................:..:x.:. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 167249223 22965332 +16563 chr4 + 190214555 179518083 179518082 179518966 884 TGATGTAATTGAATTTTCAAGGAGCCAAATTTCAGATGAGGATGTTGCTATGATCAATAAAACGTTATTAATCGTTCCTGATTCAAAGCCTTATTAAACACAGGAATCCTCCGGTGG-TTTTGTGGATAGCGTTACCCTTTTGAGAGTTATGAGGCAGTGGCAGCTCCGTCCCTCTGGAGCCTTTCTTGGCGTCCCCATCCTCTGAATGTGTGAA--TGAAGCACAATAGGCATTTGCCGTAATAATCTTCTTAGGTAAAGCCCACTGGCATTTCAGTAAATCAAACCGCAAA-CAAATTGCTCCAGAAAATTTGTGATCCTTCTGCTGAATGCAGGTTTTCATTTAAAGTAGGAAAGCAGTAAATTCGCATCAT-GCAATTGATCCACACTATGTTGGCTATTTCAACTGTACCTGTTACGAGTATAATTTAACTCTGCATGA-------ACAGCATTTTGCCATGTTGTATATTACTAGTAACACAAAATTACAGTGTTGCTACATAAAAAGGAATATCCTGAAAAAGATAAACTTAGCAACACCTTCTATTTAA---ATTCCTGGCT-----TTAAACTA-AAGTTTAGAAGCAGTCCCCACTTTCATAAGCAGGAAC---------------ATGTGCTGGATAAGTATAAATGAAGGAAAAA-AGGGACAT--ATCAATTATACCAA----GAACTATATCATGAGCCTTTTGTTCATTTGTGGATCTCTGAGCTGCGGCATTGGAGCCAGCCCATAGTTCTGGTATCTAAATGTGTGGCATGGGTTTAGCCTTTGGCTTTGCCTCAGGAAAAATCCTTTAACAGCTAAATCTATATAAAAATTCATACCTTTCAATTATCCCTGCCTGAGAATGGCTTTGCAGCAAGGTGCCCAAGATCAGAACAAGGTTAATGCATTTAA chr4 - 94230402 51336442 51336441 51337309 42893094 42893093 42893961 868 TGATGCAATTGGAGTTTTGCAGAGCCAGGAGTTAAAGAAGGATTTTGTTGTGATCAGTAAAAT-TTATTAATAATTTGAATATGAAGAGCTTATTGAAGTCAAGAATCTTCATGTGAATTTTACTGATATCTAAAGAGTAAAGATAGTTATGAATCAGTAGCAGCCTCATTCCAATA------TTCCTAAATTCCACTGCCTTT---TCTGTGAAACTGGAGTATGA--------------AATAGTCTTACTAGGTAATGTCCAACTGCATTCCAGTAAACCACTCTACAAAACAAGTTATCCTGGAATATTTGTGAGCCTCCTGTTGAATAGATGTTAGCACTTGAAATAGAATAGCACTAAGTTTCCAGTGCAGCAAGTGCTTCACATTATGTTTACAATGTTAATGGTGCTGGTTATGACTGAAAGCTAATTCAACATTATTGTATTGTATTGTTTTAGTCTGCAGTACATTAACAGTAGAATAATTTT--------------TAAAAAGTACTGACCCTTAATAAATGAAA--AGAGATAGCTATTAAGTAATAGGTTTATAGCTGCGTATTAAGCTATACATTAAAAAACAAT--------GTATTACTAAAAACTTATCAAATGTCTTTGTGCTCTGAATAAAGCCAAAGGCaaaaaaaataaaaacattaaaaaataaaaaCAAAAGAGAACTCAATCATAATTGGTTTACTCATTT-----TCTGAAAGCTG----ATCAGATTTGCTCTCTAGTCCCAGTTGCCTACTGCATGGCAAAGTTTTAGCTGTTGGCTTTGCCTCAGGAAAAATGCTTTAGCAGATAAGTCTGTCTGAAAGTTTGTATTTTTCAACTATCACCGCTTCTG--TGTTTTTATATCCATATAGACAGGATGAAAACAGTGTTTGGAGATTTAA .....:.....:.x...::x:......::xx.:.:.x:.....x...:.:......:.....:-........x:..:xx:xx.x..::x......:..xx..:.....:..xx...:-....::x....x.xxx.xxx.xxx..x........:x....:.....::.:.:..xx.:------...:.::xx...x.xx...:.---.x......--..:..:.::.--------------....:....x:.......x.:...x:x.....:.......:..xx.::....-...:..:::.::...x........x...:...:.....:x.x...xx..:..:..:...:.x....x...:..:x..x:::-....x..x.:....:......x:.x..x.:..:x..:.:x....:..x.:x..x:...:..x:...x.-------::.x::....:x:x..:x...:....x:....:x.:..xx..--------------.......x.x.:x..:xx..x.:..:..x--..x:.:.x..x:..xx...---:..:x.:...-----....:...-.x:..x.:..:..:.--------x:..x.x:.::...---------------:..:x...:....:xx:...x.x.::.....-.:::....--.xx...x.x.x...----.....xx.....:.x:xx...::......-----...xx:.....----..::..x:::x:.:x....:.::..xx.:x.x..::.....x:.x......:x......................x.....:...x...:...:.x.:...:..::..::......:....x.:..:.xx.--..x:...::.x.x.x:.:xx..:...x.:....:x...x:x:x...... 63M1D53M1I59M6D21M3D8M2I10M14D52M1I81M1I68M7I42M14D29M2D19M3I10M5I8M1I15M8D14M15I31M1I8M2I14M4I29M5D11M4D131M2D49M 529/825 64.1% 868/94230402 0.0% 102/825 12.4% 128181641 62032914 +3020 chr4 + 190214555 179534440 179534439 179534488 49 GTATAATAAAAAATAAAATAAAAAAATAAAATAAAATAAAATAAAAGAA chr4 - 94230402 68090962 68090961 68091010 26139393 26139392 26139441 49 GTAGATTAAAGAATAAAATAAAAAAATGGAATAAAATAAAAAACAGAAA ...x.x....:................::............x.x.::.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 111443478 78771077 +3289 chr4 + 190214555 179559320 179559319 179559406 87 AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATACACATTTACTCTTACCATCTTTACTATTTTCAA chr4 - 94230402 69437739 69437738 69437817 24792586 24792585 24792664 79 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCT-TACATAAGTAATTCTGTTCTTTCTCAC-------ACTGTTTTCAA .........x........:x...................x.-..:...x:..xx:x::..:x:...:..-------...:....... 41M1D27M7D11M 61/79 77.2% 79/94230402 0.0% 8/79 10.1% 110121581 80092974 +3178 chr4 + 190214555 179571521 179571520 179571635 115 TGTGGAGATTGAAGATGAGGTATT---GTTTGGGCTGAATGGTGTCCTC--CAGTATGTGATAGTATTTGGTGATGAGTTTTTTCTTTTGTTTTTTGTTTTTTGTTTTTTTTGAGACAGA chr4 - 94230402 29781277 29781276 29781392 64449011 64449010 64449126 116 TGAGGAG-TTGTAAATGAAGTCTTTCTGTTCAAAATGACTGATTTGCTTTACAGCAT-TGCCAGCAA--AGTGGTGGGTTTTTTTGTTTGTTTTTGGTTTTTTTTTTTTTTAGAGAAGGA ..x....-...x.:....:..x..---...::::x...x..:.x.x..:--...:..-..x:..:.x--:...:..:.......:x.........x.......x.......x....x:.. 7M1D16M3I22M2I6M1D9M2D51M 81/111 73.0% 116/94230402 0.0% 9/111 8.1% 149790244 40424311 +18517 chr4 + 190214555 179600991 179600990 179601749 759 TAAGAAAGCATCTGAAAGCTGATAAAATCTATATTTTAGCACTGTTTCTATATGTACAAGGTAAGGCTTTCTGATCTCAATTGTCAGTATGAATTTT-------------TTGTTTCAATTTATAAAGATCAAATTCACATTTTTGAAGTGAGTTATTATTGCATATCTTCATTTAAGGTCAGGCACAATTTTGAACATGTTAATCAAAAAGAATACTTATTGTCATATCTCACTTCTGACATTTAAGAAAAACTCTTCATGCAAATTAAGTATGTGACTACACTACCAAAAGAGTGTATCAAATACTTAACACAGAAATACAATGAACTTCTCTATATTGACTGAAGTCCTTCATGTGCCTCTTCTCAAGTGCAAATTAGACTCAGATTTCTCCTCTTTGAAGTACAGTTACCCTTGTACATACACTGCTTAAAGCGTTACTTATATCTATCATGAATCAAAA-TTAAAGTATCCCTT----TAAAATATTTCCAGGCACAAGATTTTTATATCTTATAAAAAATACCCAATTCAGAAGGATTGTTGGATTCATC-AAGCTATTTTTTTGTAACTTATAATTGGCTTTTTAAA-AACTGAAAATATCAGTTTATTTTCTCCTAAGATAATTTCCTTCAAATACTCAACTT------CTTTATCACATCTGATT---TTTAATGATTACCTATTTTCTTCTAATTTCCAGAGTCTCTCTATTTATAATACAAATTGTACTTCATCACACAGGAACCTTAATTGGATATAATTGGGATGAAAGTGTTCT chr4 - 94230402 51360652 51360651 51361386 42869017 42869016 42869751 735 TAAGGAACATGTTGGAAAATAACAAAGTATGTATTTTGGCCGAGAGTCTGTACATG------------TTTTGCTCTGA--TGTCTGTATAGCATTTCCATACCTCATTCTCCTCCCAGTTTA--AAGATCTTATT-ATATTTT-GAAGCAA------------TGTCTTCATTTAAGGTCAAGAAAAACCTTGAACATGTTAATCAAAGTGAATACTTATTGTCGTATCTCAATTCTGACATTTAAAAGAAAGTCTTCATGCAAATGAGATATGTGACTGAATTACTAGAAAAGGCTATCAAATACTAAACACAGTAGCACAATGAGC--CCCTGTACTGACTGAAGTTCTTCATGTGCCTCCTCTAAAGTGCAAATTAGACTTAGATTTGTGAACTTTGAAGTTTAGGAACCCTTGGATGTGTGTTCCTTAGTGCA-TACTGATGTGtataataaaataaaatttaaaCTATCCCATAAAACAAAACATCCT---GCTCTTGTTGTCTGTG-CTTGTAG-----GCTCAGAACTGAAGAGTTGGAAAATTCAACAAAGTTGCCTGATTACAATT--AAATTGTCTTTTAAAACAAAACAAAAAAACCCTCTATTTTTTGAT----TAATTTATTCTTAACGGTTGGCTTTGCTACTTTCCTCTGATCTGATTTTATTTAAAAGTAAC--ATTTTCTT-TAATTCACAGGTCATTTTTTTCTATTATTGAAATATTATATCA--AATCTGGCAGCTAGCTTTCACATTCCAGGAATGAAAATATACT ....:..xxxx:..:..:x.:.:...:.x.:......:..xxx.xx...:..::.:------------..:..x...x.--....x....::xx...-------------.:x.::..:....--......xx...-.:.....-....::.------------.:................:.x.x..::..................:x..............:.......x.............:.:...x.............x.::.........:x.:...:.:..:..xx...........x.......x.::.......:.--.:..:..:..........:.............:...x................:......x.xxx.........x:..xx.......x.::.::::.x....:x..:-....x..:.x...x..:..x:....-.....x......x.----:....:..:::---..x.xx.x.x.:.:.:-...:..:-----:.:..:xx.x....::...xx::.....x.-...:.:::.xx..::..:.--x.....x.....x...-..xxx....x.x.xx.:......:.xx.----......x:.::x..::x.:::...------:..:x..xx........---.....x::.x..--........-.....:x...:x:x.:.:.x.:...x..xx....xx..:x...--.xx.x..x.x..x:x..xx.:..xx:x..:......:.:.x.. 56M12D11M2D16M13I13M2D11M1D7M1D7M12D165M2D107M1D25M1I14M4I11M3D16M1D7M5D30M1I19M2D16M1I28M4D24M6I17M3I12M2D8M1D43M2D43M 493/706 69.8% 735/94230402 0.0% 82/706 11.6% 128240339 61974216 +3945 chr4 + 190214555 179604207 179604206 179604348 142 AAGAAAGAAAGAGACAGAAAGAAAGGAAAAAAGAAAGAAAGAGAGAGAG----GGAGGGAGGAAGGAGAAAAAAAGAAA---GAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAA chr4 - 94230402 44053989 44053988 44054137 50176266 50176265 50176414 149 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAAA .....x.:.:....x.....::.....:.x......:x::.:::.x.:.----.:..::..:...:...x.....x:..---:..::.x...::..:x:.x.x.::.:x.:.x:..x....:.......:.:.:x.:x..:.x.:.:.. 49M4I26M3I67M 87/142 61.3% 149/94230402 0.0% 7/142 4.9% 135550218 54664337 +3020 chr4 + 190214555 179604271 179604270 179604341 71 AAAAAAAGAAAGAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAAAGAAAGAAAAAGAAAGAAA chr4 - 94230402 25066985 25066984 25067055 69163348 69163347 69163418 71 AAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAA ...:.x...x....::..x:.x:...:.x.....x.::::.:::.............::.x......::.. 71M 47/71 66.2% 71/94230402 0.0% 0/71 0.0% 154537286 35677269 +3267 chr4 + 190214555 179604278 179604277 179604345 68 GAAAGAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAAA chr4 - 94230402 77186077 77186076 77186136 17044267 17044266 17044326 60 GAAAGAAAGATGGGGGGGGGGGGGGAGGGGGGA--------AGAAGAAAAGAAAAAGAAACACAAAAA ..........x:.:...:...:......::...--------....::.............x.x.:... 33M8D27M 48/60 80.0% 60/94230402 0.0% 8/60 13.3% 102418201 87796354 +3216 chr4 + 190214555 179604280 179604279 179604345 66 AAGAAAGAAAGAGGGAGGGAGGGAGGAAGGAGAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAAA chr4 - 94230402 59863354 59863353 59863419 34366984 34366983 34367049 66 AAGAAAAAAAAGGGGGGGGAGGGGGGGGAGGGAAGGAGAAAGAACAAAAATGAAAACACAAAAAAA ......:...::...:.......:..:::.:....:.:..::..x...:.x:..:.x.x...:... 66M 45/66 68.2% 66/94230402 0.0% 0/66 0.0% 119740926 70473629 +3007 chr4 + 190214555 179653429 179653428 179653492 64 GCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAATTCACAGAAGTAGAATCCTAT chr4 - 94230402 30090787 30090786 30090850 64139553 64139552 64139616 64 GTGACACTTTCATTAAAAAAAAGAAAGAAAAAAAAAAGGAAAATACATAGAAGCTGCATCATGT .:..x...::xx:.x.......:...:..........:......x..:.....:x.x...x.:. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 149562642 40651913 +3861 chr4 + 190214555 179679229 179679228 179679332 104 CATATATATGTATATATATGTATACACACATATATGTGTGTACATATATGTACACACATATATATCTGTGTATATATGTATACACACAGATATATGTGCGTATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...::....x:...:.:..:..:...x.x::..:x..:::...:....x......:x:.....:.xx..::.....x:..::.x......x.:.:::::..... 104M 65/104 62.5% 104/94230402 0.0% 0/104 0.0% 106558123 83656432 +3103 chr4 + 190214555 179679286 179679285 179679355 70 ATATATATCTGTGTATATATGTATACACACAGATATATGTGCGTATATATATGTACACACATAT-----ATGTGC chr4 - 94230402 48167041 48167040 48167115 46063288 46063287 46063362 75 ATATATTGCCATATATGTATATAGACATACATGGACATGTGCTCATACACATGTACACATGTATGGTAAATGTGC ......xx.::.:...:...:..x...:...x:x.:......x:...:.:.........::...-----...... 64M5I6M 51/70 72.9% 75/94230402 0.0% 5/70 7.1% 131512245 58702310 +3165 chr4 + 190214555 179734165 179734164 179734216 52 CTCCCATCTCAAAAAACAAACAAACAAACAAACAAACAAAACAAAACAAAAC chr4 - 94230402 69241319 69241318 69241370 24989033 24989032 24989084 52 CCCCCACCCCCCAAAAAAAACAAACAAACAAATAAATAAAAGAAAAGAAAAC .:....:.:.xx....x...............:...:....x....x..... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 110492846 79721709 +3068 chr4 + 190214555 179734176 179734175 179734225 50 AAAAACAAACAAACAAACAAACAAACAAAACAAAACAAAAC-AAAACAAAA chr4 - 94230402 12577357 12577356 12577407 81652996 81652995 81653046 51 AACAACAAGCAAGCAAACAAACAAACACAACAGAGCAAAACTGAAGCAAAA ..x.....:...:..............x....:.:......-:..:..... 41M1I9M 42/50 84.0% 51/94230402 0.0% 1/50 2.0% 167156819 23057736 +3476 chr4 + 190214555 179734624 179734623 179734673 50 TTGATCTTTCTTTTTTTTTTCCTTTTTTTTGGGGGGGGTGGGGGGAGGAG chr4 - 94230402 36231169 36231168 36231218 57999185 57999184 57999234 50 TTGGTGTTTTTTCTTTTTTTCTTTTTTTTGGGGGGGGGGGAGGGGAGGAG ...:.x...:..:........:.......x........x.:......... 50M 42/50 84.0% 50/94230402 0.0% 0/50 0.0% 143503455 46711100 +3017 chr4 + 190214555 179734634 179734633 179734673 40 TTTTTTTTTTCCTTTTTTTTGGGGGGGGTGGGGGGAGGAG chr4 - 94230402 21866348 21866347 21866387 72364016 72364015 72364055 40 TTCTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGAGGAG ..:.......::.......x........x........... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 157868286 32346269 +15684 chr4 + 190214555 179747324 179747323 179747895 572 AGTGCCTGACATAGGGCAATAAGCAGCCACTTAGAAACTCATGGAAAGCTCACACAGTTTCCTAGTGGACAAAGTGCTTAACTCCATTAGTGCCATAGGCTGATTAAATCA-CCCACATTACATTTCAATGGTGTTTCAGCCAATTAAGCCG----------GCTCAATTCATCTCTGC--TTTCTGGGGTCATAAAGACATTAGAATCA-AATTTATGAACAGGCCTGTTAGTGAAATGGCTTGTAGAGTTGTTTTTAAATCAGGGTGGCTAAATGAATTTTTTAAAAAGTTTAAAATGGTCCAAAACAAGTAAATT----TTTTTTAAATATTCGAAGTCACCATGATATGGC--CTTAATTACATTCAGCAAATGCTTTTCCCCTTCTTTCTCGAGGCTGACTTGGAAAGCAGTGAATGGAGGAAATCAGCCAACTGGAACAGAGGAAGAAATAAGCTGAATTCATTTTCAGTCAGGTGGCCTCATTGTGGAACTATCTTCTGGTAGCACT--CAGTTCTCCTGAATGATGATGCCACCAAGCAGCACATGGAAGAGGGCAGATTTGATCCCAGAAGTAACATGCATCTAG chr4 - 94230402 51393047 51393046 51393600 42836803 42836802 42837356 554 AGCACCTTCAAAAGTGCCATAAACAGGCACTTAGGAACTTAATGAAAGATTATAGAATTTTCTAGTGGACAGGGTGCTTAACTCCATTAGTGTCATGGGTTGATTAAATAATCCTACATCACATTTCAAATGCACTGCAACCTATTAAGTCAGCCCATTGGTGCTCAATACATCTTTACTTTTTCTGTGGTCATAAAGATGTTGTGACAATGTTTTTTGAGGTAACCTGTAAATGAAACGACTTATTGTGCTAT-----AGTCA----TGCCTAACACCCCTTGTGGAAA---TAAAAGGGATTAAGGCATACTAGTTTAGGTGTTTTTTGTATAGAAAATCACTGTAAAAGAACATCTTAACAGCACACTTTGGAGGGTTATTCC----------------GAACAGGAAAGTGGAGGGCTTTATGAAGCAGCCAACTGCAGCAGACTAAGAAATAAGCTAAATTCATATTCAGTCAGGT--CTCTATTGTGGTAATATCTTCTTGTACCTTTGATATTTCTCATGAATGATAATATCACCAA----------GAAAAGGATGAATTTGATCCCTAGTGTAACATCCATATAG ..::...xxx.x..x..x....:...x.......:....:.xx.....x.:.:.x.:...:..........::...................:...:..:.........x.-..:....:.........xx.:::.x..:..x......:.:----------.......x.....:.:.--......x...........::..:x:.:x.-:x...x...:xx::.....x.:.....:.:...:.x.x.:.:.-----.:...----x..:x..::xx::..x.::...---.....x..x::..::..x::x.:..----.x....xx:...xx:..:....::.:.x.x::.--.....:x:..:x.xx:::.x.x..x.:..----------------..x:x......::.x.:::xxx:x:..x..........x.:....xx............:.......x...........--.:::.......x.x........x...x.x:.--:.x.....x........:..::......----------...:...::::..........x::x.......x...x... 111M1I40M10I17M2I29M1I43M5D5M4D22M3D25M4I33M2I29M16D79M2D31M2I28M10D40M 365/532 68.6% 554/94230402 0.0% 62/532 11.7% 128354277 61860278 +3755 chr4 + 190214555 179763688 179763687 179763803 116 TGGCATGATCTTGGCTCACTGCAACCTCTACCCCACGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGTACTACAGGTGCCCGCCACCATGCCTGGCTGTTTTGTG chr4 - 94230402 18197114 18197113 18197221 76033182 76033181 76033289 108 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTGTATCATCCTTTCATG ......x..x..------..:..:..:xx.x.::x:.........:.x...x..x.x........::...........x......x...--.:....::..:x.x:::x...::.. 12M6D71M2D25M 75/108 69.4% 108/94230402 0.0% 8/108 7.4% 161566574 28647981 +7190 chr4 + 190214555 179769205 179769204 179769525 321 TTTATTATTTATGGATTACATAGTGGGCCAGTAGAGAGCAGGAAAAAGAGAACTTGCAAACTAAAATCAATACA---AATAATCGCCTCTCACAAGAGAAATCCCAGGAGGTTAAGCAGCTCTCTCTTGTCTTTCCTTGACACATCTTTTTCTCTCTGACTTTTTTCCTTCCTCTGTTTGCTCTAAAAAAAAATTCTCTATGGAGGAGTGTTTCACTGTTTTGCTCCATTATATTGTTGGTAAATAATCA-TTATTAGCATTTTTTTGGCCCT---GCATTTCCCTAAATGATCCATTCTAAGTTAAAA---------ATGGTAGCAGGCAGACTAC chr4 - 94230402 51395353 51395352 51395632 42834771 42834770 42835050 280 TTTATTATTTATAGTTTGCACTGTGGGCCAGGAGAGGGAAGGAAAGCGAGAACTTGCATACTAAAATCAATACAAATAATAATAGCCTCTTACAAGAGAAGCCTCAGGGGCTGAA-----------------------------------TATCTCTGGGTTCCTTTTTT-------------TACATAAATGATCTCGGTGGATTATTGTTTCAATGTTTTGTGCTGTCACTC---------ACAGTCAGCTAGCAGCTCTCTTTTTGTCCCATGGAAATCTTCTCACTTCTATGTGCCAAAATAAAACAAAATTACATAGCAGCAGGTAGCCCAC ............:.x..:..:x.........x....:.x......:x...........x...............---......x......:.........::.:....:.x.x..-----------------------------------.x......:x..::..::..-------------..x.x...x:x....x:....xx.x.......x.......:x.::.:.:x:---------.:.:...-:..x:...x:.:....x.:..:---.x.x.:::..x.x.xx.x::.x.:..:x.....---------..:.:......:..x.:.. 74M3I38M35D20M13D51M9D7M1I22M3I33M9I19M 187/264 70.8% 280/94230402 0.0% 73/264 27.7% 128373852 61840703 +3046 chr4 + 190214555 179806010 179806009 179806069 60 AAAAAAAGAAAAAGAAAAAGAAAAAGAAAACAAAAAAAAAGAAAAAAAGAAATAAATAGG chr4 - 94230402 35576275 35576274 35576334 58654069 58654068 58654128 60 AGGAGAAGAAAAAGAAGAAAAAAAAGAAATCCAAAATTAAGAAAGAAGGCAGTGTACAGG .::.:...........:..:.........x.x....xx......:..:.x.:.:x.:... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 144229735 45984820 +3094 chr4 + 190214555 179823707 179823706 179823773 67 CTATACCTT--AAAATCAGTCTCTCCCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC chr4 - 94230402 87295310 87295309 87295378 6935025 6935024 6935093 69 CTATAACTTTACAAATCAGCCTCTTAGTATCTTTTTTCTTCCCTCCCTCTCTCTTTCATTATCTCTCTC .....x...--x.......:....:xx.:...:.:.:::..:...:........:..x:.x........ 9M2I58M 49/67 73.1% 69/94230402 0.0% 2/67 3.0% 92528397 NA +4044 chr4 + 190214555 179829990 179829989 179830172 183 TTTCTGCTCCCCACCACAACCCGCCCCACCAACCC--TGACTTTTTTGAGACAGTCT------------CACTCTGTCGCC-------------CAGGCT-AGAGTGCAGTGGCACTATCTTGGC-TTATG----GCAACCTCTACCTTCTGGATTCAAGGGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCACACACCACCATG chr4 - 94230402 18196997 18196996 18197206 76033197 76033196 76033406 210 TTTCTATTCCCTAACAAGACCTAACTATCAGACCCGCTGTCTCTCCTCAGACAGCCTTGTGACCCCAAGCTCTCTGCAGTCACCATGCTGGGAGCAGGCTTAGGGCACA----CATCTGCTTGGCATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .....::....:.x..x:...::x.:xx.x:....--..x..:.::.x......:..------------.x.....:x.:.-------------......-..:.::..----..::xx......-.:...----:..:..:xx.x.......:......x.x...x.xx.x........::.............:....--.:::......::.. 35M2I20M12I12M13I6M1I8M4D12M1I5M4I65M2D14M 124/177 70.1% 210/94230402 0.0% 39/177 22.0% 161632993 28581562 +18488 chr4 + 190214555 179839138 179839137 179840149 1012 ATAAACAGACA-----CCTAATTGAACTGTAAAA-TTTTACTATTGCTATTGTGCTCAATTTACTTTGCTGAATTTTAATGTGAGAAGACTATCAAAGCATAGCTACAGGAAAATGCCCTGCATTGTAAATGTATATACAGAATTCCATGAATGTTAATTATTGTATTCATACCAAATTCTCAAAATATTTCACAGAAACATTGAAATTTTCTGTGTTCATAATGGTTTTGCATAAAAATGTGT------TAAAGAATT----ACAGATATTTACTCTGAGCCTAAATTTGAAAACAACTCTTTTGCTATCCTACTAAAGGAATGGAATAG--------------------CACTGTTGCTCAATTTGTTAACAGAACAAAAAATGTAGGTAACAATAAAGGCTAATTTTTTTTAATTTCAAGGGCACTTCAACTTATC-TGTCAATAGAAAATCTAGTCTACAGTCAC-GGAGCTGTCATCTGTATATTACAAGGCATGATAAAAGAGTTTTGCTTTTCACAAGTGCAAAGGGGAAAGTTAAAATGCCACAAAATGTATGGAACTTGAAGAATATGCATTCCAGCTTCATTTGACAAGAGAAATTTGTCAAACTCTCAGTTGTACTTATTAACCACATGCCTTCACAGTACCATGTTTTATCTCTCATTTC--AAGTTTTATTATAAACTTAGCTTTCTA---------TTTAAGAAAATATCCTGACATAATAAA----------------------ATTACGTTTTTCATTTACTAGTTAAGATTAACTTGCAGCACTTAACTTTATTTATATTATCCTTATTATGTTTATGCATTCAAAACAAGCATGATTCCTAAGTTTACAGCTGGGTGCTATCTCCATACTCAGTTCTGAACAGTGC--ACCGTAACTGGGAAGCTTGGAAATGCTAATAGAAACAGGTGGTATTTT-CAAATAGAAAATAGCCACTCCTGAGTTCATTTATATTAGGTAATTACACTTCTCATTACCTTTTCCTGTTGATGCCAGATTGGTTGTTACTCCACAGGGAATACATAGGTAAGCACTGCATTTTCACAATT chr4 - 94230402 51418833 51418832 51419816 42810587 42810586 42811570 984 ATAAGCAGACAAGCAGCCTATTTGGACAGTGAAACTTTTACTATAGCTATTGTGCTAAGTTTGCTTTATTGTACTTTAAAGCTAGAAGGCTATCAACACAGAGCCAAGAGATAATGTCCTGCATTCCAGATATGTGTGCAGAGTGGTATGAATGTTGATTATGTTTAGAGTTCAGGGTTCT----------------AAGGCTGGACTCATTTCTAGGCCTTTTGTTTGAGAACAAACATGAATATTGTATGAAAAATTCAAAATAAACAGTTACTAT--------------------TTCATCAGCTGTCACAACAGTAAAGTAAGATAGATATTTCACGCAGGAGGACATGCTGCTGCT--GTGTGCTAAC-----------TGCTGATTACAGTCACTTCTCCATTAGTTTTGTTTAGACAGAAATACTGTTTTTGGTGTCAA--AGTAGCTGGGTATGTGTTCACCTGAGGTGCTGGTGAAGCATTGCCATGCAAGAGGAAAACTACATTGTTATTGCAGATTGTGGGGGGGAAATTAAAATGCCATGAAATGTAAAGTGCTTGAAGAATATGTGTTGCAGTTTCATTTGACAAGGGAGATTTGTCAAGCTGTCAATTGTACTGATTAACCTAACGACCACGCAGTATCACTTTTTATCTCTCCTTTTGGAGAATTTGTTTTAAG--TAGCATTTTAAACCACTGCCTAAAGAGTTTACACGGAGGCAGCGAAGGGGGGGAAGGGGGGAGAGGGGATCAAAATTTT---------------------------TACATAAATTTCTTGATGTTATTGTTATTCTTCTTCAAAATTAAGAAC--------TGCGTGAACTTGCATTTAAA--------CTGCACTCAAGCTGGTATACTACAAAATTTAAATATGAGATATAGGAA----GATATAAATAGGTGGTGTTTTGAAAATGGAAAGCAGACACCATAGAGTTTATTTATATTAGGCAATTATGTTTCTTATTACCTCTTCCTTTTGTTGCCAGATTGGCTGTTACTCTTCAGAGAATACATA--TAGGCACTGTATTTTCAGACTT ....:......-----....x...:..x..:...-.........x...........x.:...:....::..x.:.....x.:x.....:.......x:..x...:.x::..x....:........x:.:..:.:.:.:....:.xx:.........:.....xx.xxxx:.x.x:::....----------------..x::..:.x.:x.:.x.:xx.x.xx..x..xx.x.:...x...x:.------.:..:....----.:.:.:.x.....x.--------------------:..x.:x...:..x:.x:.:x::.:.:::....--------------------::...:....--:.x..:....-----------..:x.:.x...:.x.xxx..xxx..xx...x:...x:.x:.x.x.x.x::..x.x-......--::x.:::x:..x.:::x....-x...x..:::x:x:x::...:.x.x...x..x:...:xxx:x.xx..x.::..::.xxx::....:..:...........::.......x:.x:.............::..x...:.............:..:.........:..x...:.......x.......xx.:.x.:x.:.....:..:x...........x...:--.::x...:..x...:--....x..:..---------:.x....:xx..:x.x..x::.:::..----------------------..:.x:x....---------------------------:..x...x...x..x..:....:x.....x.x:..xx:x...x.:...--------.x.x.:.::..:..x:.:::--------.:::.....:x::x.x.:.x.:.--.x:x...x.:x..:::x.:.:..----:...x...:.......:....-x....:....::..x...:x:x.....:............:.....:::....:.......:.....x...x...........:........:x...:.........--..:......:.......x.x.. 11M5I18M1I146M16D47M6I9M4I15M20D33M20I10M2D10M11D55M1I6M2D21M1I202M2I15M2D10M9I27M22I11M27D48M8D20M8D23M2I23M4D21M1I107M2D22M 592/910 65.1% 984/94230402 0.0% 176/910 19.3% 128420305 61794250 +7538 chr4 + 190214555 179841074 179841073 179841480 407 GTCTCACAGCCTT--GACTACTTCATGCTCAGGGCAGCGGTCTGCATTCTGGAAAGCATCATTTTGCCAGGCGTTCTGCTCTTCCCTCACAATAACATGTATTCTGTGTT------------TAAACTTAATT----------AAACCTG----TTTTGTTTAC----CTTTCACACAAATTTGTAAAAAGGTGATTTTCCATTGTATGATTTTCCTACTCTTCGTAAGAAACTATT-TCTCAAATGTTCTGCCCCACAGGCACTTTTCTTCATT-TCTCTTC----CTTTCTTGCTCAAGACACCTGTCAGTACATTTAATATTTTCTATTATCTCTTAAACAGAAGGGGCCTCAGGCTGTAGCTTGACAAAGACACCCAAGGGTATTGACATCTC-----AAGTAGATCCAGATGTCACTGCCTCCCCAGTCCTCTTGTTCAAAACAG chr4 - 94230402 51420676 51420675 51421094 42809309 42809308 42809727 419 GTCTCACAGCCTCAAGATCCCTTTGTGTCAGAGGCAACAGTATGCCTTCTAGTAAATAT---TTTACTAG------------CACattatataaaattttattttttGTCACGAACAAAGCACAACCTTAATTTCTCAGAAGAAATCCTAATTCTCTTGTTTACAATTCTGTCACTCAAA-----GAAAAAAAAGTTTT-----GTCTTCTTGCTCTATTTTATGTAACAAATTACAATAACAAATACAGTTCCCTACTGATTTTTTCCCTCACTGTTTCCTCAATTCTTTTGTGCTTAAAATGCCTGTCAATACTTTTAACAGTTCCTTGTATCTCC--AACAAGACTGGCCTTAGGCTGTAGCTTGACAAAGACACCC-AGGATACCTCCATCACTTCGTAGGTGG---CAGCTGTCACCTTCCCAACACTCCCTTTGTTAGGAAAAG ............:--..::x...::..::x::....:.:..x...x....:.x..::..---...:.:..------------:x.x.:.:.xx..xx.x....:.x...:------------:..x.......----------..x...:----.:........----..x....x....-----:....::x::....-----..x.xx..x::...:.:.x:....x...:..:x-.xx.....::xx.x...:..x.::x:...:.:...:.-.:..:..----....:x....:..:.::.......:...x.....:.x..:..xx......:--....::.xx.....:.........................-...:..::xx....x.-----.:..:.---...x......:x:.:.xx..x...::.....x::..x.. 13M2I44M3D8M12D28M12I11M10I7M4I10M4I12M5D14M5D33M1I37M1I7M4I51M2D40M1D16M5I6M3D39M 256/376 68.1% 419/94230402 0.0% 74/376 19.7% 128420398 61794157 +10076 chr4 + 190214555 179868964 179868963 179869229 266 AGACAGTCGCTTTCATTGTTATTCTG---AATATTCAAATAAAAAAGAAT-AATCTCAGTGGATT---CCTTTGGAAAAA-----------CAAATAAATTACAAAATGAGGAATGTGTATTTGCCCATCTGTGCATTTTGCAGCCATCATGACAAA-TTGTTGATTTGATACCATGGG-CATTATTAAAATCAAAGTCCTGCCAATCCTGCTTTCATACATAACAGATTATACTAATTATCTATTGGGGCCAAATTCACACTCTAGCTATTAACTCTTATTTACC chr4 - 94230402 51424097 51424096 51424378 42806025 42806024 42806306 282 AGACAGGTCTCCTCACT----TTCTGGAAAATAGTCAAAGGACAGCACATCAGACTCAGAGGATTGTCTCTCTGAAAAAAAAAGCCCAGAATAAATAAAATCCACAATGAGAAATCCATATTTGTACATCTGTGCATTTGGTAAGCATAAAGCTAAACTTGCTGATTTGATACCATGGGGCATGAGTAAAATCAAAGGCTTGCCAATATAGTCTTTGCACATAACAGATTATACTAATTATCTTGTAGGGCCAATTATAAATTCTAAGTATTAACTCATGTTCATC ......x:x:::...:.----.....---....x.....x:.x.:x:x..-.:x.....x.....---:..:..:.....-----------:.......x.x..x......:...x::......:x.............x.:.:x...x.x.x:...-...:.................-...x.x...........x.:.......x:x.::..:::.........................xx.:.......x.x:.x.:....:x.........x.:..:.:. 17M4D5M3I21M1I14M3I12M11I66M1I21M1I106M 196/262 74.8% 282/94230402 0.0% 24/262 9.2% 128444867 61769688 +3301 chr4 + 190214555 179878479 179878478 179878556 78 AAAAAAAAAAAAAATATATATATATATATACACATA-TATATATACATATATATATACACATATATATATACACATATA chr4 - 94230402 16272556 16272555 16272631 77957772 77957771 77957847 76 AAAAAAAAAAAAAACATCTTGTTATATATA---ATACTTTACATACATATATATAAACACATACATAAAAATAAGCATA ..............:..x.xxx........---...-.x..:.............x.......:...x.x.:.x::... 30M3D3M1I42M 60/75 80.0% 76/94230402 0.0% 4/75 5.3% 163605923 26608632 +3705 chr4 + 190214555 179878579 179878578 179878695 117 TATACACATATATACATACATATATACACATATATATACATATATACACATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACATAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACAT--ACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.:..:::....x......:.........x.x::..:x:..:..--..:....x:..:..:x:.....:::x:........x.:.:::x:.:.x.x.:.:....:....x:..x.. 45M2D70M 72/115 62.6% 115/94230402 0.0% 2/115 1.7% 106757477 83457078 +3808 chr4 + 190214555 179878597 179878596 179878700 104 CATATATACACATATATATACATATATACA------CATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACATATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.:.::.::.....x:.....:.......------...:x:..:....:....x:.....:x::....:.:x:..:.....x...:::x..:.x.x.:...:..:.... 30M6I74M 68/104 65.4% 110/94230402 0.0% 6/104 5.8% 106757497 83457058 +3246 chr4 + 190214555 179878604 179878603 179878664 61 ACACATATATATACATATATACACATATATAT--ATACATATATATACACATACATATATACA chr4 - 94230402 17520749 17520748 17520811 76709592 76709591 76709654 63 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATA ...x.......x...:.x.........:..:.--..:.x.:....x......:........:. 32M2I29M 49/61 80.3% 63/94230402 0.0% 2/61 3.3% 162357855 27856700 +3032 chr4 + 190214555 179878621 179878620 179878692 72 TATACACATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:.::x.....x:::.....:...:..:......::.:....xx.....x..x.....:::.:.x....:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 127397385 62817170 +3607 chr4 + 190214555 179878657 179878656 179878762 106 TATATACATATATATACATATATACATATATATACATATATATACATATATACATATATATACATATATATACATATATACACATATATACATATATACATATATA chr4 - 94230402 73121104 73121103 73121209 21109194 21109193 21109299 106 TGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .::..:.....x:.....:.......:.x.x::.::x:..:....:....x::.:.::x:..:..:.:x:........x.:..::x:.:.x.x.:.:....:.... 106M 64/106 60.4% 106/94230402 0.0% 0/106 0.0% 106757553 83457002 +3097 chr4 + 190214555 179878664 179878663 179878753 90 ATATATATACATATATACATATATATACATATATATACATATATACATATATATACATATATATACATATATACACATATATACATATAT chr4 - 94230402 27943537 27943536 27943626 66286777 66286776 66286866 90 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGT ...x::.....:xx:.::.:.:..::...x:.:.::.x....::....:...:.:.x:......x..x..:.x......:..x..:.::. 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 151935127 38279428 +3850 chr4 + 190214555 179878709 179878708 179878825 117 CATATATATACATATATATACATATATACACATATATACATATATACATATATACATACATATATACATATATACACATACATATATACATATATATACGTACATATATATACATAT chr4 - 94230402 73121100 73121099 73121216 21109187 21109186 21109303 117 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .:.:.::..:.....x:.....:.........x.x::.::x:..:.:.::....x:....::x:..:..:.:x::.....:.x...::.x:.:.x.x..::....:....x:..x.. 117M 70/117 59.8% 117/94230402 0.0% 0/117 0.0% 106757609 83456946 +3408 chr4 + 190214555 179878710 179878709 179878801 92 ATATATATACATATATATACATATATACACATATATACATATATACATATATACATACATATATACATATATACACATACATATATACATAT chr4 - 94230402 27943537 27943536 27943628 66286775 66286774 66286866 92 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT ...x::.....:xx:.:....:..::...x:.:.::.x....::....:...::::x.......x..x..:.x.........x:.:..:.:. 92M 58/92 63.0% 92/94230402 0.0% 0/92 0.0% 151935173 38279382 +3123 chr4 + 190214555 179878758 179878757 179878825 68 ATATACATACATATATACATATATACACATACATATATACATATATATACGTACATATATATACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x..:....:.x.::..........::...:......x.:......x...::.:::.::.x:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 172282345 17932210 +3541 chr4 + 190214555 179878784 179878783 179878847 64 ACATACATATATACATATATATACGTACATATATATACATATATATACACATACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.:.....x...:.x...:..:.....:.:x..:.x.:....x......:........... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 162358035 27856520 +3032 chr4 + 190214555 179878803 179878802 179878874 72 TATACGTACATATATATACATATATATACACATACATATATATACATACATACATATATATATATATATATA chr4 - 94230402 52481236 52481235 52481307 41749096 41749095 41749167 72 TACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..:.:.x.:...x:::.....:...:..:......::.:...:xx...:.x..x.....:.:.:.x...... 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 127397567 62816988 +3420 chr4 + 190214555 179905533 179905532 179905695 163 AGAAAGGAGAGAAAGAGAAAGAGCGAGAGAGAGAATAACAGAGAGAGGAGGGAGAGGGGAAGAAAGGAAGGGAGAAAGGAAAAAAGAAATAAAGAA--GTGTAATTGAACCTATATGTCT------ACTACCCA------AATGAGCAAACCTGGGGTGTTTTGGATATATTTGCTT chr4 - 94230402 34307570 34307569 34307743 59922660 59922659 59922833 174 AGAGAGGTGGTGGGGAGAAAAAACACCTCAGGAAGTAATAAAGAGAGGAGCGAAAGGGGAGAGGAGACAAAAATAAATAGGAAGGGAACAAAAGGAATGTGCAACAGAATTAAAAAGTGTTGTAAAATTAAACAGTTGGCAATGAGAAAA---GAGGTGTTAGGAACACCTTTGCTT ...:...x.:x:::......:.:.:xxxx..::.:...:.:.........x..:......::::..:x.:::.x...x:::..::...xx....:.--...:..:x...::x.x.x..x.------.:..xx..------......x...---.:......xx.:.:.:x....... 96M2I22M6I8M6I10M3D24M 100/160 62.5% 174/94230402 0.0% 17/160 10.6% 145597963 44616592 +3021 chr4 + 190214555 179906580 179906579 179906699 120 GGCAGGCTTGCTTGCTTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTTTT chr4 - 94230402 70187543 70187542 70187662 24042741 24042740 24042860 120 GGTGAGCTGCTTTGCTTTCCTTTGTTTGTTTCTGTATGTTTGTATGATTTCTGTTTGTCTCTTTTTCCTTGTTTTCTACCTTTTTTCTTTTACTACTTTTACTCTTTCACTCCTACTGTT ..:::...xx:.......:....x.:.x.....x.x.x.:.x.x.xx:..::x..:x.:::..:..:...x:.....x:...::...:..:x:.x...::x::....:x..::.x..x.. 120M 69/120 57.5% 120/94230402 0.0% 0/120 0.0% 109719037 80495518 +3235 chr4 + 190214555 179906647 179906646 179906707 61 CTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTTTCTTTTATTTTTTT chr4 - 94230402 2453080 2453079 2453140 91777263 91777262 91777323 61 CTTTTCTATTTTTTTCCTCTCCTCCTTCCTACCTCCTCCTTGCTTTTTTCTTTATTGTTTT ....::.x:...:.....::.:........x...:.:::..x......::......x.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 177453567 12760988 +3709 chr4 + 190214555 179932524 179932523 179932611 88 GAAGGAAAAGCAAAAAAAGAGGGAAAAGAAAGAGAGAGAGAGAATGAAGGAAGAAGGAAGGATGAAAAGAAGGAAGGAAGGAAAGAAA chr4 - 94230402 7739260 7739259 7739345 86491058 86491057 86491143 86 GAGGGAAAAACAGAGGGGGGGGGGAAAAAAAAAGAAAGAGAAAATGTAGGAGG--GGAATTTTGAAAAAAAAAAAAAAAAAATTGAAA ..:......:..:.::::.:...:...:...:...:.....:....x....:.--....xxx......:..::..::..::.xx.... 53M2D33M 59/86 68.6% 86/94230402 0.0% 2/86 2.3% 172193264 18021291 +3313 chr4 + 190214555 179940257 179940256 179940318 62 TTTTTTCTGTGTTTTGTTTTGTTGTTGTTGTTGTTGTTGTTGCACTTATCTGGGAGGGAGGG chr4 - 94230402 62983314 62983313 62983373 31247030 31247029 31247089 60 TTTTTCCTGTGTGGTGTTTTGTTGCTGTTGTTATTGTTTTTTAA--TATTTTGGGGGGAGGG .....:......xx..........:.......:.....x..xx.--...:.x..:....... 44M2D16M 49/60 81.7% 60/94230402 0.0% 2/60 3.3% 116956943 73257612 +3096 chr4 + 190214555 179953213 179953212 179953252 40 AAGACTTAACATTTCTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 63260444 63260443 63260483 30969920 30969919 30969959 40 AAGACTTAACATTTATCTTTTTTTTTTTTTTTTCCTTTTT ..............x.:................::..... 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 116692769 73521786 +3332 chr4 + 190214555 179973890 179973889 179973932 43 AAAACAAAAAAACAAAAAACAAACAACAACAACAAAAAACAAA chr4 - 94230402 16619856 16619855 16619898 77610505 77610504 77610547 43 AAATGAAAAAAACAAAAAACAAACAACAACAACAAAAAAAAAA ...xx..................................x... 43M 40/43 93.0% 43/94230402 0.0% 0/43 0.0% 163354034 26860521 +4190 chr4 + 190214555 179977416 179977415 179977648 233 CATTCTCTCTCCCCTTTCTCTC-----------CCCTCTCTATTCCTCTTCTTCCCTTCCTCTTCTCTTTTTCTCTCTGTCTCCTCCTTTCTACCTCTCCCTCTCCTCTCTTCCCTCCTTCTCCTCTCTCTCCCCTCTC------CTCACTTTCTCTTCTCCTTCC-----TTGCTCCTCTCTTCCTTCTCTCTCTTCTCTTTTATCTCATTCTTATCTCTTGTCCACTTTCTCTCCTCT-----------CTCTTCTGCCCTTTG chr4 - 94230402 92912803 92912802 92913050 1317353 1317352 1317600 248 CATTTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGA-----------CTGCC-CTTCCTTTCTAAATCCAGATTTCTTCCC------ACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAGTCTTTCTCCATCCTTAGCTTGTGTGCCTCTCTGCTCTCTG ....:::.......x..x.:.:-----------.:...::..x::...:.:....x....xx.xx-----------...:.-.:.........xx..:xxx.:..:..:.------x...x.x........:.....:.------....:..:.x......x..::-----..x..::......:.:.:.::..::.::..:.x....:.....xx.x.:..:xxxx.......:x::..-----------.:::.....:..:.. 22M11I32M11D5M1D28M6D23M6I21M5I69M11I15M 140/215 65.1% 248/94230402 0.0% 51/215 23.7% 87064613 NA +27957 chr4 + 190214555 179982078 179982077 179982740 663 TTCCAAGTTGT----GATGCTTACCTAACAAGCTAGAAAACCAAATTTTAATATCACAAATCTATAGTTTCTTTCTCCATATAAAATGTTTATTATCAACCTCGTGGTAGCATTTCTGCAGCTTTTGTTTCAGCATTAAGGTTATTACACTTGCCTTTTCTGTTCTCATTACTAGAATATTTTATAGGTAAATCCACTCAAGGAACCTGTTGTGCTTTCTGATCAAAGTGGAAAGTGATTCCAGGCTATAATAAGCAATTTAATTTTTAATGAGCTTATCCGTGCCCAAGGTCATAACAAAGCTTAAAAA-----AAGAGTTAAAATAAAACTACAGCAAAA--------------CACTAATGATAATGCCCAG-ATACGACCAGGGCATAATAATATTTGGCAGAGCGCACTCTCAAAGTATCTCAGTGGTATTCTTTTTTTAAATTTTGTTTCAGAATAGAAACTTAGCTCAAGTAAGGTGTAGAATATTAAATAACATAGACATAGATAAAAATGCATGAGACTTTTCTCCTAAAAGAAG-TAAGCCAAGCTGTTTTCAGAATTTAAAT-TTCTAAGCTAAAAATGTTTAAGTAGTTTTACAAAACTCTGTGTTGTTAACCCATTGTTATTTCTGAAGGAGATAAAAATTTGGTATGCTGTT--TTATTATCTTTTCCTGCAATTTT chr4 - 94230402 51451512 51451511 51452182 42778221 42778220 42778891 671 TTTCAAATTGTAAAAGATTTTTGCTTAATAAGCCAGAAAACAGAATTTTCATATTGTAAAGAGGTTTATCTTCTAGTTAGAGAAAATGTTTGTTGTTATCCTCTGGGTGGTATTTCTGTAGCTTTTGTTTTGATATTAAAGTTATTAAACTTGCCTTTTCTGTTCTCATTACCAGAATTTTTTGTGAGTAAATCCACTTAAGGAACCTATTGTGCTTTCTGATCAAAGTGGAAAATGAAGCCAGGTTATAATAAGCAATTTAATTTTTAATGAGCTGATCGAGGCCCAAGGTCATAACAAAGGGCATAAAACAACAACAACAAAAAACAAACAACAACAAAATTCCTAGCATGGAGCACTAATGATAGCACCTTGCACATGACCAGGGC---AAGGTATTTGGCAGAGTACATCTAAAAGGTATCCCAGCTGTATTTATTTTTT--ATTTTCTTTCAG------AACTCTACCTAAGTAAGGTGTAGCATATTAAATAATACAGAAGCACATAAAAATGCATGAGACTTGTTTTCTAAAAGAAACTTAGCTAGGATGTTTATTGAATTTAAATCTCCCAAGCTCAAA---TTTAAATGCTACAGCTATAAGCTGAGTGTTTAACCGTCTAATATCTCT------AGTAAATACTTAAAATGTAGTTAACTGTTATTCTGGAGTGCAATTCT ..:...:....----...x:..:.:...:....:.......x:......x....:::...xxx:.xxx.::.:.xx::.x.x.........:..:.:.x....xx...:.:.......:...........::::.....:.......x........................:.....x....:.::...........:.........:.........................:...xx.....:..............................x...x:x...................xx:.x...-----..x.::x....xx....x...:.....--------------...........:::..:x.-.:.:.........---.x::............::..:::xx..:.....:...:x.....:x......--.....x......------....:x:.::.............x...........:.:...x::.x...................x.:.:.........:-.x...:.:.x.....x:x..........-.:.:.....x...---.....:.:x.x:x:.x.x.xx...x..xx......xx:.:x...:...------::....x.:..::x...:x...--:.:....::.xxxx.......:. 11M4I295M5I27M14I19M1I13M3D52M2D12M6D80M1I28M1I13M3D48M6D22M2I23M 483/643 75.1% 671/94230402 0.0% 48/643 7.5% 128530566 61683989 +3847 chr4 + 190214555 179994075 179994074 179994159 85 TTCTGAAACAGAAGCATATCGT--ATATATATATATATATATATACACACACATATATATGTATATGTTAGTATTATATATACAAAT chr4 - 94230402 63997319 63997318 63997405 30232998 30232997 30233084 87 TTTCAAGGCAGTAGCATGTAGTTCATAAACATGTCTGTGTACATGCGCACACATGTATATGTATATGTGCATACTGTATATAAAAAT ..:::.::...x.....:.x..--...x.:..:.x.:.:..:..:.:.......:.............xx:..:.:......x.... 22M2I63M 61/85 71.8% 87/94230402 0.0% 2/85 2.4% 115996756 74217799 +3009 chr4 + 190214555 180011180 180011179 180011235 56 AAAATCCTTAATGATGAGGTGGAGATGAAAGGTAAAAACAAACAAACAAACAAAAA chr4 - 94230402 66233637 66233636 66233692 27996711 27996710 27996766 56 AACATTATTAAGCATGAAGCCTAGAAGAAAGAAAAAAACAAACAAACAAACAAAAA ..x..:x....xx....:.:xx...x.....:x....................... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 113777543 76437012 +14770 chr4 + 190214555 180050257 180050256 180050823 567 TCATTTTCTCCTGAATGACCTTGAAGCTTA----------ATGAAATTCACATGAAAGTTTTACTATGCGTGTTTAAAGAAAGCAGTTAAAAAGATTCAGATAG----CTTTAAAAAATTGAATTTCATTTTATCAAAAAAAAATCCTCTGT-TCTCATTTATTGAAAAAGTAAACTGCTTCAATTCAAAAGCAGTT-TACAAGCAACTTTCATGGTGCGTCTTTGTTGTCACATGGCAATGTCCCCTCGATTGACAAGTGGTGCAATGGTCTTTGAG-GACTGATTACTCAGGATGTTAAGAGCATGAACTTCATG-ATTTTTAAATACTTTCTTGAATACATGCTTCAAAACAAAGTCAAAC-TTGAACCAACCATTTAAGAAAGAA--TGTCTCAGTGCTGACAATAGGAAACACTA-TAAAGA--------ACATTAA----TCTAGCTTCCTGTTTACATTTGACAAAAGTAGAGGTACACAGTTGTAGAACTATGTGAAATGCCTGGGCTCTGTTCAGCAAGGTAGATCTACATAAAGTCACT-AGTGA-TTAAGATGGAAGGAATCTTTAGAGTGCCATATGCTGACATTTGGAAA chr4 - 94230402 51472741 51472740 51473309 42757094 42757093 42757662 569 TCATTTGTATTTAGTTGACCTTGAAGCTCACTGGTTAGAGATGAAACTCACCTA------------------TTCAAAGAAAGCCCTTTAAAACACTCAAATAGAGAGTTTTTTTAAAGTGCATTTCACTTTTT-----AATTTCCCACTGTATTTCTTCCATTGAGAATGCA--CTGTCTGAACCCAAAGGGATTTCTACATCTAACTTTCATGCT----TTTTGTTGCTACACGGCAGTGACCGCTAGATTGGCAAATAGAATAATTGCCTCTGAGAGACTTCTT--TAAGGATGTTAAGAGCATGAACCTCGTTTCTTTTTAAGTAGCTTCTTAAATAAATGCTTCAAAACAAAGTCAACTATTGATCCAGCTCTTTGAATAAAAAGTTCTCCCAGT-TTGACAATACGATTTACTACTGAAGATAAAACGTACATTAATCTTTCTAGTTTATTGTCTTCAGTTGACAAAGGTAGAATT--ACAGATGCTGCACAAAGAAAGATTTGTACCCTCTGTTTGAAATGGCAAATCTACATAAATTCATTGACTGACTTGGGATAAAAGCAATCTGTACATTTCTACATCTTGTCACCTGAAGA ......x:x::.::x.............:.----------......:....x.:------------------..:.........xx..x....x.:...:....----:...xxx...x..x......:...x.-----..xxx:..x....-.:..x.::.....:..x.:.--...::.x..::....:.x.x..-....xx:..........x.----:.......::...:....:..x..x..x.....:...:.:.x::...x.:..:....-....xx..--.x....................:..:.x-x.......:..x:.....:....x....................x:-....x...:.:x...:.:x..:..--.x..:....-:........x..xx:....-.:....--------.......----.....:..x:...:.x..x........:.....:x.--....x..:x.x..x.x.x:.:..x:x.:xx.......:::x.x..:.:...........x...:.-.x...-..::...::...x.....x..x.x.x.:.:..x:..x..::..:.:. 30M10I14M18D32M4I26M5D13M1I20M2D22M1I19M4D57M1I8M2D28M1I46M1I24M2I9M1D19M1I6M8I7M4I36M2D65M1I5M1I47M 383/533 71.9% 569/94230402 0.0% 70/533 13.1% 128577516 61637039 +3476 chr4 + 190214555 180069506 180069505 180069592 87 TCTTTTTGTTTGGTTGCTTTTGTTTTGTTTTGTTTTGTTTTTGAGACAAGTCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGGTTT chr4 - 94230402 41907438 41907437 41907520 52322883 52322882 52322965 83 TCTGTTTGTTTGGGTTTTTTTGTTCTGTTTTGGTTTTTTTTTGAGGCAATGCTATG-CAGCAAG---AAGGTGCAGTAGCCCAGTCT ...x.........x.x:.......:.......x...x........:...xx..x..-..x.x..---:::.......:..x.:..:. 56M1D7M3D20M 63/83 75.9% 83/94230402 0.0% 4/83 4.8% 138162068 52052487 +11249 chr4 + 190214555 180081057 180081056 180081308 252 TGTCCTTTTTTTCTCACCATTAAAGAACCAAAATATAACCTCT--CTGTAACTCTGGAGGCCTCTTATCCAAAGTCATTTTCTACAGAATGGAAAGCTTCTCATAGTCAATAATCACTT---------CATCTATCTTATCTAGTAGTTCAATTATCACATTAAAGTGCTTTATTGTGGGGCATTCTCTTTGATACTTTCCTCTCTCTGGTTAAAATCCAACCAGGCAGTGAATCGCTTACTTATTACTCTTCTAAAACCAGA chr4 - 94230402 51486716 51486715 51486977 42743426 42743425 42743687 262 TGTTCTCTTTTGCTGTGTGTTAAGAGAGCTAAATGTAACCTTTGTCTCTGGCTCTGGAGAGCTCTTATACAAAGTAATTTTCTACTAAATTGAAGGCTTCTCATAGTCAATAATCACTTTGTGATAGACATATATCTTATCTCGTAGCTCAATTATCATACAAAGGTGCTTTATTGTGAGAAATTCTCTTCGGTAGGCTTGT-TGTTTGGTTGAAATCCAGCAATGTAGTGAATCAATTGTGTGACACCCACACAAAATAAAA ...:..:....x..xxx::....:::.x.x....:......:.--..x.::........:x.......x......x.........x:...x...:........................---------...x..........x....:..........:.:x..:.............:.:x........:.:..xx:.:x.-.x.:.....:.......:.x.x.:........:x..::x.:x:..:.x:x:....:x.:. 43M2I74M9I74M1D60M 185/251 73.7% 262/94230402 0.0% 12/251 4.8% 128594341 61620214 +19389 chr4 + 190214555 180086764 180086763 180087201 438 TACTAATTATGGGCTAAACAAATTTGTTTAATATTCAATTTAATCTATAATACACCAAAAAATTGCAAATAGATTCTATCTTGTCTGTTTAGAATGTTATAAGACTTTGTTCTGTATGCTTTTCAAAGCTTTGTTCTTCTGCCTTTGGGACTAAATCATAAAGTTCAACCAAAAAAGCTTTGTTTCCCAAAGGACACAGCAGGCATTGATAGTGTACTGT-AGCTGTAATTCTATAGTGACACCAGATTGGCGACTGACAGAAATCTCTTGGGTGAAAGTGACAAAGCTGTAATATTTTCACAATGGACTGACTGATGTCTTTGGAAGGTCTGTTTGATTTCAAAGGACATTTATATTTTTCTGTGAAGAT-----GAAAGTATATTAGACCTTTGTGATGAAAATCATCTGACTGCATAATAAGCATGGAGATAAATAAAATT chr4 - 94230402 51497264 51497263 51497696 42732707 42732706 42733139 433 TATTAATTGTACCCAGAGGAACTTTGCTTAGTAGTCACTACAATCTATAATACAAGATAACATTGCTAATAAATGCAATCTTGTCTCAGTAGGATTTTTAAAAAATATCTGCTGTGTCACTTTGGAAGCTTTGTTCTTCTGCCTTTGGGAGTAAATTGGAAAGATCAGCCAACAGATCTTAATCTTTCAGAGGGCATAATGGGCATTGATATTGTACTGTAAACTATAATTCTGTAGTGTCATCAGGCTGCAGACTGACAGAAATCTCTTGGGATCTAGTGACAAGGTTGTAATATTTTCTCAATGAAGTGACTGATGTCTTTAGAATGTGCCTTTGATTTCAAAGGGCATTT-TATTTTTCGTTAAAGATAAAAAAAAAATATTTTAGATTTTTCTAATACAAAGT-TGCGACCACATAATA---------ATAGATAAAATT ..:.....:.:xx.x:.:x..x....:...:..x...x.x:.............xx.x..x.....x....:..x.x.........xxx...:..x..xx..:.x.x.x.x....:.xx:...x:.........................x.....::x....x...:....x.:.x...x:.:.::..:...:..:.:::..........x........-.:..:.......:.....x..:...::..xx.....................xxxx........:.:............x.....:.x..............:...x..x:x..............:.....-........xx.:.....-----:...:...x.....::...x.:..:x...x:-.x:...::.......---------...:........ 220M1I132M1D17M5I31M1D15M9D12M 321/427 75.2% 433/94230402 0.0% 17/427 4.0% 128589500 61625055 +3025 chr4 + 190214555 180095439 180095438 180095509 71 AGGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACAGAGATTTTAGTTGTTC chr4 - 94230402 31741125 31741124 31741195 62489208 62489207 62489278 71 AAGAGATACTGCTTAAGAGAAGGAAAAAAAAAAAAAAAAAAAGGAGCAGATCATATGCATTTAAGTTTTTC .:....:x...::.x.:.:..::...................::.:x.:.x:.:.x:x....x....x... 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 148354314 41860241 +3020 chr4 + 190214555 180095451 180095450 180095517 67 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACAGAGATTTTAGTTGTTCTTTCTCAA chr4 - 94230402 5641836 5641835 5641902 88588501 88588500 88588567 67 CCCAGGAAAAATAAAAAAAAAAAAGAGAAAAAGAAAGGGATCTGAGCTTATAGTTTCTTGCTTTCAA .:..::.....x............:.:.....:...::.xx.x...x..x.....x:.:x:.:.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 174453615 15760940 +3519 chr4 + 190214555 180114881 180114880 180114955 75 GTGTGTGTGTATATATATATATGTGTGTGTGCATGTGTGTGTATATACACATACATATACCTATATTTCCAAATT chr4 - 94230402 86633744 86633743 86633818 7596585 7596584 7596659 75 GTCTCTGTGTTTATGTATATATGAATCTGTGCATGTGTGTGTTTATAGGTATAAACAAAGTTATAATTTCACATT ..x.x.....x...:........x:.x...............x....x::...x.:.x.x:....x..:..x... 75M 56/75 74.7% 75/94230402 0.0% 0/75 0.0% 93481137 NA +3256 chr4 + 190214555 180119765 180119764 180119834 70 CATTTAACCTCTAGATATCAGTAGTTTTAGTGAAAAAAAAAAAAAAAAAAAAGGAAAAGAGAGTTCATTA chr4 - 94230402 59520240 59520239 59520309 34710094 34710093 34710163 70 CATTAATCCTCTGGATACCTGTAATGTTAGTAAAAAAACAAACAAACAAAAAAAAAACAACAATTCTTCA ....x.x.....:....:.x...:.x.....:......x...x...x.....::...x:.x.:...x.:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 120599525 69615030 +6200 chr4 + 190214555 180137621 180137620 180137755 135 TGTATTTACAACCCAT--CATGTTCCAGATGAAACCCACCATATTGCAGCTGACAACTTTTCATCCAGAATGAATGCTGCTTACCTAAAGCTATTATAGTTTTACTGAGGTTGTTATAGGTAGATAGGTAATAATGA chr4 - 94230402 51519421 51519420 51519557 42710846 42710845 42710982 137 TGTGTTTGCATCTCATACTTTATTCTAATTGACATCCACCATATTGCCGCTGACAGCTTTTCAGCCCAGATGAATGCTGTTTGCCAAGAGCTATTACTACTTTGCTGAGATAGTCATACATGGGTACATTATAGTAA ...:...:..x.:...--:x.:...:.:x...x.:............x.......:.......x..x::..........:..:..x.:........:x::...:.....:.x..:...x:.:.:..x:.x...:.:. 16M2I119M 96/135 71.1% 137/94230402 0.0% 2/135 1.5% 128618200 61596355 +30387 chr4 + 190214555 180160426 180160425 180161083 658 AAACAGTGATCGATTTTAATTGGTTACTTTTTAGTGTCAGCACTGTTTTACTATGCAGCTTTAAATACGCATAT--AAACCGCAGTGGTACTAAAACCTAAGAAGTCACATTCTGATCATTTCTTTTGTCAAAGAAGCA-----TGATCTTAACTCATGAGTCACTGTTAAATGTAA-GTGTAATGTGAAGGAAAAATGAAAATACATTATGAGTAGTTTTTTGCCAATTTGTATAATTTTTCAGTTAAGCAGTCATAAATCAAGGAATATTGTATTTTTTGAGGCTCATTAAAGAGACATTATACATCAGAATAGTGAAGTCGTCAGCATAATGAAATGATGAATGCCTGTAACTATCTGTATGTAAATGATGTGAGACAGATTCA-GGGTGTTACAAAGGAGAATAACAATCTCTCTGACAGTTCCCTGTAGGTGCAGTTGCTGGATGCTGGTGACAGATGTTAAATGCAAACCTCTTCAATGGCAAGCACTTATTAGCACTCAGTGG----AAACTCGCAATATAAAATAAGACAAATAGCAGATTATATCATTTTAAATAAATTTGTTCAGTAAGGTGTGTTATTG-CATTTTAAG------------ATTCTTCTTTATTAACAAAGGCAGTATTCTAAATTAAAGAAAACAGAATAGAA--AAGAAAATGGCTATTTGAA chr4 - 94230402 51531616 51531615 51532277 42698126 42698125 42698787 662 AAAAAGTGATCAATTTTAATTTGTCAAATTCTA-------TGCTGTTCTCTCGTTGTACTGAAAGTATACATATTAAAACAGCGATGACTGTGAAGTCT--GGTGTTAAAATTTGATC-----TTTTGTCAGAGAAACAAATCGTGAGATTAACTGAAGAGTCATTGTTAAACTTAAAGTGCAAGGTAGCGGGAAGA-AAAAATGCTTTATGATGAATTTT--GTCAATCTGTATAATTTTTCAGTTAAGCAGTCATAAATCAAGGAATATTGTATTTTTTGAGGCTCATTAAAGAGACATTATACATTAGAACAGTGAGGCAGTCAGCATAATGAAATGATGAATGCTTATAACTATCTGTATGTAAATGATGTGAGACAGATTTGCTGGTGCTACAGAGGAGAATAACAATCTATTTGACAGTTCCCTGTAGGTGCTACTTCTGGATACAAGTGACAGATGTTAAACGTAAACCTCTTCAACAGCACGCACTTATTAGCACTCAGTGGGGAAAAAATGGCAGTATAGAATAAGACAAATAGCAGATAATGTTA-TTTAAATAACTTTGTTC-TTGCAAAGCTTTATTGCCATTGTGAGGTTGGTTTTCTTGTTTGTTTTCATTGACAAAG-----ATTAGGTATGTAAGAGAGCCTTTTGGAATGTAGGAAATTGTCATTTGAA ...x.......:.........x..:.xx..:..-------::.....:.x:::.xxx:..xx..:..::.....--....x..::..::xx.:..::..--.:x..:.x.x.:.....-----........:....:..-----...xx......x.x......:.......:x...-...:..x..::x..:..:.-:.....:.x......xx.:....--.:....:..............................................................................:....:.....:.:x.........................:.:..................................::-x....:....:................x.:....................x::.x......:.x:...............:.:............::...x.....................----...x.x...:....:...................x..:.:.-.........x.......-x.:x::x.:x......-....x.:..------------:..:x.:..:...:......-----...xx:x..xx....:.:.xxxx.:...--x..:....x.::....... 33M7D34M2I23M2D17M5D16M5I33M1I19M1D23M2D164M1I122M4I41M1D17M1D16M1I9M12I20M5D28M2I19M 503/634 79.3% 662/94230402 0.0% 52/634 8.2% 128628810 61585745 +8138 chr4 + 190214555 180173560 180173559 180173922 363 TTTCTTTAGCAAGAACCGGAATTAGAGTGAGAGCAGGAAAGAAGTAAAATAAAAACATTAAATAAATGTAATATGCAGAGGCAGAGAAGCTTTGGGATTCGTGGAAAATAATACAAAGAAAT--TCATGAAATAACATTTACAAATGATGAGATAGAAGGA---------GAGGAAAAG----TTAGGGTATTGTTTTAATTTAAATTGTTTTAATTTAAAAGACAGTCTTAACCTGAAGCAAACACTTCAGTGCTGAAAAGCACAACCAATTATCTTTTTT--TGAAAGCAGTTTCCACCTGAAAGGGATGGAAATTAGGAAGTGAAGAGATGAAAAAGAGACTGCCTTGGGAATATTGTCTCAGAATGCATGTATTTA chr4 - 94230402 51537329 51537328 51537674 42692729 42692728 42693074 346 tttttttttttGGAAGCTGGATTAGAG----AGAAGTTGGGAAGTAAATTTGTTAC--TAAATACAGGAA---TGCAAAAGAAAAGAA----------------CAAGCAATGAAAAAATATGGTGATGGA-CACCACTGA-ATAGGGTGAGATGGAAGAATACTTGAAAGAAAAAAAGATAATTAGAGGGTTTTTTTTTTTT---TCATCTTAACTTTGGAGATTGCCATAACCTGAGGCAAACTGTTTGACATTGCAATGCAGAAGCAATTATCTATTTTACTGAAA-CGATTTCCACCTGAAGGAGATGGAAATTAGAAAATGGAAAGATGAAAAAT---CTGACTTAGAAATACTGTATTATAGAGTATGCATTTA ...:...xx:x:...x.x.:.......----..x..xx::........x.x:xx..--......x.x.x.---....:.:.x.:....----------------x..::...:x...:.x..--.x...:.-:.x..:.x.-.x.x.:......:....:.---------..::.....----....:.x:..x....xx...---.::.:....:..x::...:x.:.x........:......xx..::::::..x..x...x..x.........x....--.....-.::............:.:............:..:..:.:..........x---...x...:.:....:...x.:.x.:x.:...:..... 27M4D25M2D12M3D15M16D18M2I7M1D9M1D19M9I9M4I20M3D76M2I5M1D50M3D37M 232/329 70.5% 346/94230402 0.0% 51/329 15.5% 128636231 61578324 +3149 chr4 + 190214555 180191232 180191231 180191291 60 TGCTTTCTTGTTTTTTGTTTGTTTGTTTGTTTAATATCATCTAATCCTTTATGAAGGCAT chr4 - 94230402 54369415 54369414 54369474 39860929 39860928 39860988 60 TGTTTTTTGCTGTTTTGTTTGTTTGTTTGTTTAATCTCACATAAACCTTCTGAAAGACAT ..:...:.xx.x.......................x...:x...x....:xx:...:... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 125821817 64392738 +3739 chr4 + 190214555 180192069 180192068 180192147 79 CCACAACCTCCACATCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCATGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .:...:..:xx.xx.:.:.........:.x...x.xx.x.........:...........:.:....--.:........ 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 161994943 28219612 +3324 chr4 + 190214555 180193281 180193280 180193350 70 CTCCCAGGTTCAAGTTATTCTCCTTCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGCCCACCACCATG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG--CACCACTGTG ..:.::.........xx...x.xxxx.........:...........:.:....x...--......::.. 58M2D10M 52/68 76.5% 68/94230402 0.0% 2/68 2.9% 161996142 28218413 +6676 chr4 + 190214555 180227975 180227974 180228174 200 AAACTTCTTCATGGCAAGTATACTGATTCCATCCGCTATTATTGTGATGGGGAAGACAAATTATCCAATTACTAAACACAGTGCTCTAGGCAATACAAAATAACATCCTGATTAATCTAACTACATA-GGAGAGATACTTCTGTTTATCACGCTTCCCCTAAAACAAACAATATTGGATTACAAATAAAGATGAGTCATAT chr4 - 94230402 51559161 51559160 51559361 42671042 42671041 42671242 201 AAATGTCTTAGTGGAAAGGGTACTAATTGTATACAGTTTGCTTGTGAAAACAAAGACAAATTATCCAATTACTAAGCACACACTTAGAGACAATACAAAGGAACATGCTGATTAATCTAACTATGCAGGGAGAAATCTTTTTCTCTTTAAAAGAGATCCTGAAACCAGCAGCATGGAGATGAGCATAGAAGTGAGCTAAAT ...:x....x:...x...x:....:...x:..x.:x.x.xx......x::x:.......................:....xxx:.xx..:.........:x.....x................:::.-.....:..x:..:.x.:.x.x.x:xxxx:...:....x.:..::..x.::x.:x:x...:.::....::.x.. 127M1I73M 131/200 65.5% 201/94230402 0.0% 1/200 0.5% 128668814 61545741 +3208 chr4 + 190214555 180244878 180244877 180245018 141 CCTTCTTTCTTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTC chr4 - 94230402 24861589 24861588 24861728 69368675 69368674 69368814 140 CCATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATTC-ATCCAGCTTTACAAGCCTTTAATCTATAACCCTGCCGTGTCACCTTTCCCTTTCTTTTC ..x.:..::..x..::.x.x..x..........:.:.:.x::x..:::::.:..:::...:.:....:.:.......x...-x..:xx....x:xxx.:..:xx...x.xx::..x.:x.x.:x.:.:.::.......... 81M1D59M 81/140 57.9% 140/94230402 0.0% 1/140 0.7% 155383289 34831266 +4010 chr4 + 190214555 180244879 180244878 180245068 190 CTTCTTTCTTTTCTTTCTTTCCTTTCTT------TCTTTCTTTCTTTCTTTCTTTCTTTCT------TTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTC--TTTCTTTCTTTC--TTTCTTCTTTCCTTTCT chr4 - 94230402 18235167 18235166 18235367 75995036 75995035 75995236 201 CTTCTTTCTGTTTTTC--TCCTTTTCTTAACAAGTTGTATTCTCTTCATTGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTC---TAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTTAGGTTTCTTATTGTCATGTTCATCCTACCTTCTT .........x..:..:--.:.:......------.:x.x:.:....:x..x.:.x..x.:.------..:...x..x..x:....x.xx..x:....::...x..x..:..:---.xx.......x.x....:.xxx.......::...:.x.......x...:..:.::..x--......x:.x..--x...x..:.x....::. 16M2D10M6I27M6I45M3D58M2I12M2I17M 125/185 67.6% 201/94230402 0.0% 21/185 11.4% 162009712 28204843 +3235 chr4 + 190214555 180244891 180244890 180245057 167 CTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTT-TCTTTCT-------------TTCTTTCTTT----------TCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTC--TTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 56151433 56151432 56151622 38078781 38078780 38078970 190 CTTTCTTCCCTTTCACAGCTCCTTACTCT---TCTTTCTTACTCTTATTGTTCTATTACCCTTAATATCTCTCAAGAATAAAACACATACTTGCAGTAGTAGGTAGGTCATGCTTATGGGTTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTT .......:......x:xx:.:...x..:.---........x..:.:x..x....x.:x::...xx.-...:..x-------------.x...x.xx.----------..x.x...x:xxx:...:..:....:x.:....:.x.xx.--..::...x.x........::.:............::.:...... 29M3D34M1I7M13I10M10I40M2I44M 110/164 67.1% 190/94230402 0.0% 29/164 17.7% 124093458 66121097 +3576 chr4 + 190214555 180244944 180244943 180245097 154 TTTCTTTCTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCT-------TTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 52381268 52381267 52381425 41848978 41848977 41849135 158 TTGCTTTTCTTCTTGTATTTTTCTTCCTATTCCTCGTTGGTTTTTTTCATTCTACGTGGTGATTTCATTCTCAAACAGCTACTTTCTTCC---CCTTTCTTCAGTTGCTTTGTTCTTTCCTGAGCTCATTATTTCTTTTTGCTTTTTAATCTTGGTTTCCT ..x....::.::..x.x.:......:..x...:.:x..xx...:....x.::.x.x.xx.xx....x....-------:.x.......:.---........:xx..x:..:x.......:.xxx::.x..x.......:.x::...:xx....xx....:. 71M7I12M3D68M 97/151 64.2% 158/94230402 0.0% 10/151 6.6% 127863676 62350879 +3043 chr4 + 190214555 180244952 180244951 180245011 60 TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTT chr4 - 94230402 32546808 32546807 32546867 61683536 61683535 61683595 60 TCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT .:.x.:.:...:......x............:::x.x.:...:..x:.......:..:.. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 147698144 42516411 +4088 chr4 + 190214555 180244973 180244972 180245140 168 TTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCT chr4 - 94230402 45185583 45185582 45185743 49044660 49044659 49044820 161 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGC---TTCATTCTTTCTTTTCTTTCATTTTTCA------CCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ..x..x..:x:....::.....:.xx.:..xx:.....x:---...x..........:.....x..:..:x------:............:..xx:.::.::......:x...--.x:....:x..x::.x.......xx.:x:.::.xx.:::..x..::.......:. 40M3D28M6D36M2I55M 102/159 64.2% 161/94230402 0.0% 11/159 6.9% 135059390 55155165 +4495 chr4 + 190214555 180244976 180244975 180245124 149 TTTCTTTCTTTCTTTCTTC--TTTCTTTCTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 45185594 45185593 45185743 49044660 49044659 49044809 150 TTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGC-TTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT ....::....:..xx::..--...::.x....x................x..:..:x.:..::..........xx:....:.:.:.:..x:..xx.x.-....:x..x::.x.......xx.:x:.::.xx.:::..x..::.....:.:. 19M2I77M1D52M 95/148 64.2% 150/94230402 0.0% 3/148 2.0% 135059382 55155173 +3838 chr4 + 190214555 180245025 180245024 180245210 186 TCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCTTTCTCGCCCACACCAGCCCAAGCAACCACCCCCAAACACATTTTAC chr4 - 94230402 91731746 91731745 91731926 2498477 2498476 2498657 181 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATT-----TCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCGCACCCGCCTCAC .:.:..x.........x::..x.....:...::.:.........::....xxxxx.:....:.x..-----.:..:.:.:..x.:..xx:x...x..x..::.:x...:::x.x...x..x:.x.:x:.x...:::x.:x...:.x:.:x..:.xx::x.x:..x...:....:x..x.:::.:.. 66M5D115M 103/181 56.9% 181/94230402 0.0% 5/181 2.8% 88513279 NA +3377 chr4 + 190214555 180245029 180245028 180245148 120 TCCTTTCTTTCTTTCTTT------CTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCT chr4 - 94230402 43081901 43081900 43082024 51148379 51148378 51148502 124 TCCCTTCCTTCATGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGT--TTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ...:...:...x.x...:------..x..::..:.:..:.:...:.....:..x::..::x.x.:::x:..:xx....xxx:....x.--........:...:...:...x.xx..::........ 18M6I64M2D36M 76/118 64.4% 124/94230402 0.0% 8/118 6.8% 137163128 53051427 +3362 chr4 + 190214555 180245041 180245040 180245183 143 TTCTTTCTTTCTTTCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTTTCTCTTTCTCGCCCACACCAGCCC chr4 - 94230402 91731746 91731745 91731874 2498529 2498528 2498657 129 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATT-------------TCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCT-GCCATCACCACTCC ..::.:x.........x....x.....:...:::...:......::....xxxxx.:....:.x..-------------.:..:.:.:..x.:..xx:x...x..x..::.:x....:.x.x...x..-...xx.....x:.. 66M13D49M1D14M 84/129 65.1% 129/94230402 0.0% 14/129 10.9% 88513295 NA +3094 chr4 + 190214555 180256335 180256334 180256386 52 AGATTCTATGAATTCTTAGTGTTTTTTTTGTTTGTTTGTTTTGCTTTTCTTT chr4 - 94230402 20788968 20788967 20789019 73441384 73441383 73441435 52 AAAATTTAAAAGTTCCTGTTTTTTTTTTTGTTTGTTTGTTTTGCTTTTTTTT .:.x.:..x:.:...:.:x.x...........................:... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 159467367 30747188 +42085 chr4 + 190214555 180280559 180280558 180281088 530 AGAGTTTGTGGCTGTTAAATATGCATGAGGCACAATAGTTTCACAACAAATCAAATTTAATTAAATGATGCATTTCCTCCACTTACAAAAGGTTTATTAAAGGTTTATTTGCTCATGCAAATTAAAGTGTTAGAGTAAAAATCCACATGAAACTTGGCACTAACAATTAAAAAAA----TATTGAAAGATTTCTCGCCTCGCTGCAATACCTTGCTATGTTTAAACTGCTCAGCTTGTCATTTAGAATCTTTAATGAAACCAGGGAGGAGGCTATTTATTTGCATAATAGGACATAATTTGCTGTGGTGAGGTTTTAATTATTTATAGGCTGTCTGAAATATTTAAAATGGCATCACTAAGGAGCATGAAGTGTTGGATAATGCCTTCATTTCAGGTTTCCTGCCGTTTCTTTTATGGGTCAAGCGATTTATTTCTAATTAGCATACCAGGCTAGTGGCTTTAAAAACATAAGGAAAACAAATTGGTTTCAGTCTGTTTGCAGCTTGAGTAGTTGGAGACGGCCAAGGGTCACT chr4 - 94230402 51572488 51572487 51573021 42657382 42657381 42657915 534 AGAGTTTGCATTACTTAAATATTCATGAAGCACAGTAGTTTCACAACAAATCAAATTTAATTAAATGATGCATTTCCACCACTTAGAAAAGGTTTATTAAAGGTTTATTTGTTCATGCAAATTAAAGTGTTAGAGTAAAAATCCACATGAAACTTGGCACTAACAATTAAAAAAAAAATTACTGGAAGATTTCTCACCTCACTGCAATACCTTGCCATGTTTAAACTGCTCAGCTTGTCATTTAGAATCTTTAATGAAACCAGGGAGGAGGCTATTTATTTGCATAATAGGACATAATTTGCTGTGGTGAGGTTTTAATTATTTATAGACTGTCTAAAATATTTAAAATGGCATCACTAAGGAGCATGAAATGTTGGATAATGCCTTCATTTCAGGTTTCCTGCCGATTCCTTTATGGGTCAAGCATTTTATTTCTAATTAGCATATAAGTATAGGAGCTTTGGAAACGTAAGGAAAACAAATTCGTTTCAGTATATTTGCAACTTGAGCAATTCAAAACTGCCAGAGGTCATT ........::x:xx........x.....:.....:..........................................x.......x.........................:...............................................................----..:..:..........:....:..............:................................................................................................................:......:..................................:...................................x...:..............:x...................:x..xx...x:.....::....:...............x........x.:......:......:.:..x:.:..x....::.....:. 175M4I355M 484/530 91.3% 534/94230402 0.0% 4/530 0.8% 128708071 61506484 +3059 chr4 + 190214555 180289957 180289956 180290005 49 GCAAGTTTGTGTGTACATATGTGTGTGTGTGTGTGTGTGTGTGTATACA chr4 - 94230402 48089498 48089497 48089546 46140857 46140856 46140905 49 GTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATA .:....:...:.:....::.......:....x.x........:....:. 49M 38/49 77.6% 49/94230402 0.0% 0/49 0.0% 132200459 58014096 +3232 chr4 + 190214555 180289966 180289965 180290027 62 TGTGTACATATGTGTGTGTGTGTGTGTGTGTGTGTATACACACATATATATGCATATATATG chr4 - 94230402 32959568 32959567 32959629 61270774 61270773 61270835 62 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATG .......x...:::..x....x.....::...:.....:...:.....:.x::....x:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 147330398 42884157 +3005 chr4 + 190214555 180312941 180312940 180312997 57 TTATAAATACAGGTATACATACATACACACACATATGTACACATACACATATATACA chr4 - 94230402 45959606 45959605 45959662 48270741 48270740 48270797 57 TTCTGACTTCAAGCATATATGCATGCACACAAATATGTACATGTATACATATTTATA ..x.:.x.x..:.:...:..:...:......x.........::..:......x..:. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 134353335 55861220 +3526 chr4 + 190214555 180331282 180331281 180331376 95 AAACATATGTATATATGTGTGTGTGTGTATATGTGTATATACACACACACACATTTTCTT-TCAGCATTTTTTCTATTTTTTGGCTCAAATTGTGT chr4 - 94230402 25393255 25393254 25393346 68837057 68837056 68837148 92 AAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTACCAGAACTT----AATTTCCTGGCCTTGCgtgtgt ...x..:...::..:...:...:...:.x.:......:.:........:....:x.....-:...x.:..----x....::....::x:xx..... 60M1I9M4D22M 64/91 70.3% 92/94230402 0.0% 5/91 5.5% 154938027 35276528 +3204 chr4 + 190214555 180331288 180331287 180331334 47 ATGTATATATGTGTGTGTGTGTATATGTGTATATACACACACACACA chr4 - 94230402 25393259 25393258 25393305 68837098 68837097 68837144 47 ATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCA ....:.::......:...:.....x.....:..:..........:.. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 154938029 35276526 +3145 chr4 + 190214555 180339529 180339528 180339615 87 CACACACACACACACATGCACGCACACACACACACACACACGCATGCGCACAGAAACCCAGACACCAAAAATGGAAGAGTCACTCTG chr4 - 94230402 84262019 84262018 84262105 9968298 9968297 9968384 87 CAAACACAAAGGTGTGCACATGCATACACACACACTCACAGGCATGCACAGGGCAATCAAGGCTTTTAGCATGGATCCATCACTCTG ..x.....x.x:::::::..:...:..........x....x......:..x:.x..:.x..:.x::x.:x.....xxx:........ 87M 56/87 64.4% 87/94230402 0.0% 0/87 0.0% 96077510 94137045 +10986 chr4 + 190214555 180346491 180346490 180346833 343 TTTCCAAGATTATAATAAA-TTAGATGTTATAATATGAAAAATTATACAAGTCACTTGATATTTCATTATTAATTGGGTGTTTCTCCAGCAGTCAAGCTAGGCTCATTTGTTGGAATAGAATGCCACTGCTTAATGTATCTAATAATGTCTTCTAAAGGATGAAATT----ACAAGGGAGAGTCTGAAGAATAAGATCAATGAACTTATATTAGTGTAAATTATCACTGATTAATGAATAC----AACATTGGGGATTAAAAT--------------TTACTTAGAGCTTAAACTTACTGCCAGTTTCACAAGCTTAAATTGAATA-AACATCCCAAGTATCCAAAATACAAATAATAGTAAGCTAA chr4 - 94230402 51604425 51604424 51604780 42625623 42625622 42625978 356 TTTTGAATATTGCAGTAAAATTAGGTAGTGCaatataaaaa----ta-aattaatttCCCATTTGATTATTAATTGG-TATTTCTTTTACCGTCAAGCCATTCTCATTTGTTGAAAT-----GCCAGTTTTTAATATGTCTCATAATGTCTCCTGGAGGATGAAATTACGCACAAGAGAGAGTCCTCAGAGAAGGATCAATGTATTTATATTAATACAAATTCCTACTGATTAGTGACTGCTGTAACCAGTAAGAAATTAAATACTTACTGTATTCCTTTTTTGGAACCTAACCTTCCTGTCAATTCTGCAAGTTAATAGTGAGAATAATATGTCAAGTACAGAAAGTAGCAGTAGTAACAGCCTAA ...:x..x...::.:....-....:.:x.::.....:....----..-..x.x.:..xx:....x............-.:.....::x:.x.......:.xx...........:...-----....x.x:.....:.:...x.........:..::...........----.....:.......:xx...:x.:........x.:........:.::.....x::........:...x.:.----.x..x.::.:.x.x....--------------..x:..:..:.:...x...x...:..:..:::....:.x.x.x...:x.-..:..x:......:xx...:..xx.:..:..::.:x.... 19M1I21M4D2M1D29M1D39M5D45M4I70M4I18M14I49M1I40M 236/332 71.1% 356/94230402 0.0% 35/332 10.5% 128742066 61472489 +3170 chr4 + 190214555 180358022 180358021 180358072 51 GGATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATA chr4 - 94230402 4406421 4406420 4406471 89823932 89823931 89823982 51 GAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA .:...::........xx...:x..................:.x....:... 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 175951601 14262954 +3345 chr4 + 190214555 180358029 180358028 180358090 62 TATATATATATATGTGTGTGTGTGTGTGTGTGTGTACATACATATATACACACATATATATG chr4 - 94230402 32959568 32959567 32959629 61270774 61270773 61270835 62 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCATG .:.:..:x....::..x....x.....::...:...:.............x.:....x:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 147398461 42816094 +3191 chr4 + 190214555 180358048 180358047 180358110 63 GTGTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....:.............:.....:..::...:.x.:xx..x:::.......::.:..:.:. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 133262884 56951671 +3835 chr4 + 190214555 180358050 180358049 180358169 120 GTGTGTGTGTGTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACACATACACGCACAT chr4 - 94230402 73121101 73121100 73121216 21109187 21109186 21109302 116 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACA----GAGACACACATGTATAAGCAAAT .....::..::.:.x......:.........x.x::..:x..:.:.:::.:.:x...:.::x:.....:..x...::....x....:.x:.:.----x.x.:.....::..:.x...x.. 93M4D23M 73/116 62.9% 116/94230402 0.0% 4/116 3.4% 107236949 82977606 +3809 chr4 + 190214555 180358060 180358059 180358178 119 GTGTACATACATATATACACACATATATATGTGCGTGTATGTGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACACATACACGCACATATATACAAA chr4 - 94230402 73121101 73121100 73121215 21109188 21109187 21109302 115 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACG----CCCACAGAGACACACATGTATAAGCAAA ....:...:.....x:.:.........:.::x:x.::.:x..:::..::..:.x:..:.:.x....:.:.:x:....:...x...:.----:x....x.x....:..::....x:.... 87M4D28M 72/115 62.6% 115/94230402 0.0% 4/115 3.5% 107236959 82977596 +3874 chr4 + 190214555 180358091 180358090 180358177 87 TGCGTGTATGTGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACACATACACGCACATATATACAA chr4 - 94230402 8395789 8395788 8395875 85834528 85834527 85834614 87 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAA ..:...........:...x....:...x.:::.......:.x....:xx...:.:::.:.:.......x....:x.::x...x.x.. 87M 60/87 69.0% 87/94230402 0.0% 0/87 0.0% 171962302 18252253 +3286 chr4 + 190214555 180358094 180358093 180358156 63 GTGTATGTGTGTATATACATATATATGTGTATGTATACATACACATATATATGTATATACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA ....::......:.:....:.:...::....::..x..xx.:x...:.:....:......... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 133262930 56951625 +10934 chr4 + 190214555 180368905 180368904 180369247 343 ACCATTTGGTAAAATAGACTAATAAAACCTAATTTGTATAATAAAATATACATGGAAAA---GAAAAATAGGACTC-----TTTCTTGAATATTCTTCAGTTGTTTCAGAACTATCCTCTTTTAAATGAAACAAAATTATTTCCCTTTCATCACAGCCTAAAAGGCTTTAAAATTATAAAGAATATTGCAGCTGACTGAATCGTTATCCTAATGGGATATTCATCAAAAGTCTATGATGATTCACAATGAGAGGCTTTTATAACTGAAATC---CAAATGTTATGTACAATGGCAATCTGAATGCATGTGTTCTTTTCTCCAGAATTGGCTTGAAAACATAGAAGTCTTACTTT chr4 - 94230402 51616228 51616227 51616573 42613830 42613829 42614175 346 ATTATTTTATGGAACAAACAAGTGGAATGTAGTCATTGTAATCAAATAGTGATATAAAAAATGAATAATAGAAGTTGCTGTTTCCATGAATGCTCTTCAGTTGTTTCTATGTTACTTTGTTTGAAATGGAACAAGATTAATGCTCCTTCATTGCTATCTAAAAAACATAAAGATTTTAAACAATACTGCAGCTGACTGAGCTGTTATCTTAATAGGGTATTCATC-AAAGTCTTTGCAGATTCAGAGTGCAATGTTTCTCAAAATGAAATCATACTATTATTATGTAAAATTTTAATTTG-GTTCATGTTATAT------AAGAACTATAATGAAAGCACAGTAGTACTACttt .::....x:.::..:.:..x.:.::..:x..:.:xx.:....x.....xxx..:x....---...x.....:.x.:-----..:.x.....::..............x:x::..:::.x...x.....:.....:....x.x.:.:.....::.x::......::.x.x..:...x....x....:.............:::......:....:..:........-.......x..xx......x.:..x:.x.:..:.xx..x.......---.x.x.:.......x...xx:...:..-:.x.....xx.x.------x....:.:xxx.....:..:..x...x:...... 59M3I14M5I144M1D45M3I26M1D13M6D34M 230/335 68.7% 346/94230402 0.0% 19/335 5.7% 128752677 61461878 +3045 chr4 + 190214555 180377327 180377326 180377383 57 GGAAAGAGGAGAGGAAACAGGGAGGGAAGAGAAAATGAAAGAAATGAAATAGAAATA chr4 - 94230402 88698856 88698855 88698912 5531491 5531490 5531547 57 GGGGGGGGGGGGGGGAGAATGGGGGGAAGACAAAGGGAAAGAGATAAAATAGAAATA ..:::.:..:.:..:.:x.x..:.......x...:x......:..:........... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 91678471 NA +14752 chr4 + 190214555 180389644 180389643 180390084 441 GGAAAGAATTCTTTAATTATTTATGTAAATTTAATTA-------------------TACCAGTTTAAGTAAAGGCTTGCCATAAACATTAGTCAAAAAAAGATAATTACTTGAATGGCATTAACTCTAATAAAGCAAAATAAACAGACTATACTAATTAGGAACTAAAATGCATATGCTGTGAACCTAATATGAAATTTTCAGTTAT--GAAATTGCA---TTGTGTAACTTGA---TAAAGGAGAGTTGTTTATTGCTGCTCTCATTAAAATAAACCCTCCTTATAGCACTTAGAATGTTGGACTCCTACAGATAACATTATAATGAGGGGATGATGCATTTTGATTGAGTCAACACAAGGGAGAAATTTAATTTAATTAAACTGGTCTTCATTAAAGTATTACATTGAAGTGAAGTAATTAT-ATGGCACATACAGTATGGAAGAAATCCTGCTGTTTAAAAGGGAG chr4 - 94230402 51628604 51628603 51629031 42601372 42601371 42601799 428 GGAAAAAAT-----ATTTATCTATGAAAGTTTAATCACCGTAACTTCCATGCAGTTTAACATTCTAAGTAGATG--TGTCATAAA---TAAGCAATAAATGACAATT---TAAATGACAGTAT------TAGAAGCAAGTA-------------------GTACTGAGATGTCTAGCCTCTCATCTTAATATATAGTTCTTTGCTATTTGACATTTAAATTTTCTGTAACTTTACTCTCAAGTATAATACATTATGACCATTCTCATTAAAACCAGCTTTTCTTATGGCACTTACAGTATTGGACTCCTACAGATAACAT---AATGAGGGTAGAATGCATTTTGATTGAGTTACCACTAGGGAGAAATTTAATTTAATTAAACTGATCTTCATTAAAGAATTACATTGAAGTAAAGTAATTATAAAGGCATGTACAATATTAGAGAAATCTTGCCATGTATAAGACAG .....:...-----.x....:....x..:......:.-------------------..x..x.:......:.x.--..:......---..:x...x...x..:....---.:....:..x..x------..:.:xx..:..-------------------.x...:.:...:x..xx..x.x.x.:......:x.:..:.:x.:...--..x...xx.---..x........x.---.x...x.x.:.xxx....x:.:::...........:x.:.::.:.....:.......x.:.:.....................---........x.x:.................:.x...x...........................:............x.............:..........-.x....::....:...x::.......:...::.x..x...:x.. 9M5D23M19I18M2D9M3D19M3D13M6D12M19D47M2I9M3I13M3I83M3D101M1I44M 306/400 76.5% 428/94230402 0.0% 69/400 17.2% 128761040 61453515 +3275 chr4 + 190214555 180390247 180390246 180390353 107 TATATTTATATATATATTTATATATATATTTATATATA---TATTTATATATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATAT chr4 - 94230402 37291713 37291712 37291819 56938584 56938583 56938690 107 TATATGCATATACATCTGCATGTACAGAATAATGAATACAGTATCTGT---TATATATTTGAATACATATAAAAGCATATATTCATTTATATTTTAATATATCTATGTGT .....x:.....:..x.x:..:..:.x.x.x..:x...---...:.:.---.........:x...:....xx.x::.......:..x.......xx......x.x.:.:. 38M3I7M3D59M 73/104 70.2% 107/94230402 0.0% 6/104 5.8% 143098534 47116021 +3419 chr4 + 190214555 180390283 180390282 180390356 74 TATATTTATATATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATA chr4 - 94230402 73418583 73418582 73418656 20811747 20811746 20811820 74 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTA .:..:x....:.........x:.:.........x.:.:......x...x.x.....xx...:.x...x.:.:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 106971700 83242855 +3419 chr4 + 190214555 180390317 180390316 180390390 74 TATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATA chr4 - 94230402 73418583 73418582 73418656 20811747 20811746 20811820 74 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTA .:..:....x:.........x:.:.........x.:.:......x...x.x.....xx...:.x...x.:.:.. 74M 54/74 73.0% 74/94230402 0.0% 0/74 0.0% 106971734 83242821 +3120 chr4 + 190214555 180390541 180390540 180390614 74 TATATATATATTTATATATATTTGTATATATTTATATATATATTTGTATATATTTATATATATATTTGTATATA chr4 - 94230402 73418583 73418582 73418656 20811747 20811746 20811820 74 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTA .:..:.....:x.......xxx...........x.:.:......x:..x.x.....xx...:.x...x.:.:.. 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 106971958 83242597 +3161 chr4 + 190214555 180390563 180390562 180390634 72 TGTATATATTTATATATATATTTGTATATATTTATATATATATTTGTATATATTTA--TATATTTTTATATTTA chr4 - 94230402 73418583 73418582 73418656 20811747 20811746 20811820 74 TGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAATAAAGATTTAGCTATGTTTTTCTGTGTA ....:....x:........xxx...........x.:.:......x:..x.x.....--...:.....x.:.x.. 56M2I16M 55/72 76.4% 74/94230402 0.0% 2/72 2.8% 106971980 83242575 +4163 chr4 + 190214555 180390846 180390845 180391056 211 ATTTATATA-TATTTATATATATATTTATATATTTATATATATTTATATATATTTATATATATATTTATATATTTATATATATTTATATATATGTTTATATATGTTTATATATATTTATATATATTTATATATATATTTTTATATATTATATATTTATATATATA---TTTATATATATATTTATATATG------TATATATATTTATATATATTTATAT chr4 - 94230402 49089516 49089515 49089735 45140668 45140667 45140887 220 ATATACATACTAATTCTATCTTTCTTAAAGCATTTTTATATAATGAAGCGTTCTTATTTTTGTCTATGTGTATTTTTATATGTCTATTTATATGTTTATATTTACCTATGCTTTGAAATCTGCGTGCTTGTGTTTATTTGCA-GTATTACACATTTAAACAAATGCATTTAATGCATCTATTTGAATGTGATGCATCGCATACATGTGTGAACATTAATGT ..x..:...-..x..x...x.x.x..x.x::....x......x.x.x:::.x:....x.x.:.x.x.:.:.....x.....:.:...x.............x.:::...::x.xxxx..x.:::.x:x.:.:.x.....x:.-:.....:.:.....x.:.x..:---..x..::..x.....:x..:..------:::...:..x.:.:x.:...x..:. 9M1I132M1D22M3I22M6I25M 131/210 62.4% 220/94230402 0.0% 11/210 5.2% 131301330 58913225 +3091 chr4 + 190214555 180390870 180390869 180390946 77 TTATATATTTATATATATTTATATATATTTATATATATATTTATATATTTATATATATTTATATATATGTTTATATA chr4 - 94230402 52481231 52481230 52481307 41749096 41749095 41749172 77 TTCTTTACATGGATATAAGCGTACATGTATGTATACATACGCACATACTGATATAAACTTATATGTGTGTTTATATA ..x.x..:x.:x.....xx::..:..:.x.:....:...:x:.:...:.x.....x.:......:.:.......... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 127909639 62304916 +3183 chr4 + 190214555 180390933 180390932 180391075 143 TATATGTTTATATATGTTTATATATATTTATATATATTTATATATATATTTTTATATATTATATATTTATATATATATTTATATATATATTTATATATGTATATATATTTATATATATTTATATATGT------ATATATATTATATTT chr4 - 94230402 87985334 87985333 87985472 6244931 6244930 6245069 139 TATAACTTAAGGTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAG----------CAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTACTTGCTGAAGAACCTATATTTTACTT ....xx..x.x:.:...x..............:.:.:::x..:.:.x:X..:.x:.x----------:.x:..x:x.:x.:...........:.....:......::.x.x..:..:.::x..:x..:------.:x......x..:.. 57M10D61M6I15M 84/132 63.6% 139/94230402 0.0% 16/133 12.0% 92405599 NA +3020 chr4 + 190214555 180390943 180390942 180391043 101 TATATGTTTATATATATTTATATATATTTATATATATATTTTTATATATTATATATTTATATATATATTTATATATATATTTATATATGTATATATATTTA chr4 - 94230402 87985346 87985345 87985446 6244957 6244956 6245057 101 TGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACATGTCCCTA .:.:...x.......x.x..:.:.:x:...:.:.x:Xx.:..:.xxx.x..x:x.:x.:...........:.........x..::.:.x..:..:.x::.. 101M 62/100 62.0% 101/94230402 0.0% 0/101 0.0% 92405597 NA +3048 chr4 + 190214555 180396118 180396117 180396165 48 AACAGGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 46683131 46683130 46683178 47547225 47547224 47547272 48 AACAGCCTGTCGTTTGTTTTGTTTTGGTTTTTTTTTTTTTTCTTTTTG .....x.....x...x....x....xx..............:...... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 133712987 56501568 +3176 chr4 + 190214555 180396124 180396123 180396192 69 CTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGG chr4 - 94230402 62053653 62053652 62053721 32176682 32176681 32176750 69 CTGTCCTTTTTTTTTTTTTTTTTTCCCTGCATTTTCTTATCAAAGCCATGTTCTGTTCTGTCACATAGG ........................:::.x:x....:..x.::.::.x:x..:::.:......:.x:... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 118342471 71872084 +12988 chr4 + 190214555 180398778 180398777 180399131 354 TTCTTCATTCATTCTGTTGTCTGCTCT--CTTCGTTCTTGGT-ACATCA-GTCTCCTCTTGCCA----------CTGTTCTCCATCTGTCTCCAGGAGCCTGCTCTCTGACTTCCAGAGCTCTCAGCTTGTTGCTTCAATTAACTTTTCAGTGGACCCCTTGGCAGCTTCCATAGTTTCCTGCTGGTGCTTCCCATTTTCCTACTGCTTTTTTATCACCGTGCTTGGCTTCCCAGCACCCCCACCCCCATTTATCAGTCCTCAGCTGGTTGAACTATTGTTTGAAGCACTCTGGATTTCCTGCTGATTTTATCACTAATTCTTCACTGATCTTTTGTTACACTTTTATTTCATTTTCTTCCCAATTTT chr4 - 94230402 51635014 51635013 51635363 42595040 42595039 42595389 350 ttttttttttttttttttAACTATTTTTACTTCCTTCTTAGTGACATCACGTTTTTCCTTGGCAGTTTCAATGACTGCTTGTTTTCTCT-TCCGTGTTGATGCAATCTGCCTTACATGCCTCACAGCTTGTTGCTTCAATTAACTTTTCAATGGACCCCCTGGCAGCTTGCATTGTTTCCCACTGCTGTTTCCTATCTCCCTGCTG-TTTTTTATCACTTTGCTTGTATT----------------CTGGTGATCACTAACTGGCTGCTTGGACTGTTGTTTGGAGCACTGGTGATTCCCTGCTGATTTTGTCTCTTATTCCCTACAGATCTTTTCTTAAACTTGTATTTTGTTCTCTACCCAGTTTT ..:..:x..:x..:.x..:x..::.:.--....x.....:..-......-..:.:::....x..----------...:.:x::x...x.-...:x.xxxx...xx....x...x..x:x...x...........................:........:.........x...x......::...x..:....:..:.:...:...-...........:x......xx..----------------.::x.x....x.xx:::....x...:...:.......:......xxx....:............:..x..x....:::..x........x...x....x.....::..:...x....:.... 27M2I13M1I6M1I14M10I15M1D116M1D23M16D122M 247/336 73.5% 350/94230402 0.0% 32/336 9.5% 128763764 61450791 +3686 chr4 + 190214555 180402181 180402180 180402253 73 CTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGAAGCTGGGACTACACGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.::........:.x...x.xx.x........::....x......:............ 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 162205055 28009500 +13489 chr4 + 190214555 180423423 180423422 180423922 500 AATAAATAAAATGTTAAAGGGTGTGATTATGGGATGCTTACATATCATGGGATAGAGTGAAATGAGAAATACAAAATAGTACTTTG-TTAATCTAAGATGCTTTACATCACTTCATTTGCATGCTATAAATACTGTTTCATGAAAAGTGGTTTTAGAGCTGACTGCTTCACTGCCTCAGTTTTTACATCTTTTAT--------------------ACATACACATTAACCTGTCTTAAGAATCAGCTTAAAATATCTTTCCTCATTTTAGCTAGTATAACGTGGATCAAAATAGAGGCATTTAGAGCATTGACTTAATATTGAAATTTTGCTAGAGTGCTTTCCAAGCCAATAATTGCAAGCTCTCCCAGAAGTATATGGTGTTGTATTGATCCTGGATTCATCACTCACAACTAGTCACCCACTTGACTCTATTGACAATGACAGTGGAATGTACAGCGGGTAGGAAGCATGAGAGTACTTATGGTTTCCCTCTGGTTTCACGCTTAGTGTTGTCTAATT chr4 - 94230402 51653304 51653303 51653777 42576626 42576625 42577099 474 AATAAATGAAATGGTAAAAGT------------GCACCAAAATATAACAAAGAAGAACTAAA--------ATGAAAAAGTCCTTTGCTTCATGGAAGATGtttta-atttttttattt--attttaaatata---------GAAGAGGGATTTTGCTGTGCCCTGTCACACTTCCTTGACTTTTGCttttttttttaaattataataatCTCTGCATATACTAAGTAGCCTGTTTGAAGAACC---CTAAGATATATTTCTTCATTTGAGCTTACACAACATGGATCAGAATAGAGGCATTTAGTGTATTGACCTATTATTGAAATTCTGT--GGGTACTTTGCAAGTCAGTAATTGCAATCTCTTTGTAAAGCATATGGCACTGTATTGATTCGGGGCCCATCTCTAGCATCTTGTCAGGCATCTGAACCTAC---CAATAACATTGACATTTGCAGCAGGTAAAATGTATTACAGAATGTATGGTTTC-------TGTCATGCTTCTTGTTCACTAGTT .......:.....x....:.x------------:::.:x.x....x.:::::x...::x...--------.::...x...x.....-..x..xx......:....-..:x:..:....--..x:..x.x...---------...:..x.:....:xx.:xxx...::x....x...::::....:.x.:....x.--------------------.:....xx.x..:.....:.x.....:.---:...:....x....:......x....x::.:...:.......:...............x.:......:..x..........:..:--.:..:....x....:..:.........x....::xx:...:......:::.........:.x..:::....x..x:..x..x....xx..::...x:...:---....:...x..:x..x.:....:....::.x.:..x.x..x.:x.........-------.x...:....xx....xx...:.. 21M12D29M8D16M1I18M1D12M2D12M9D54M20I28M3D85M2D101M3D53M7D24M 315/453 69.5% 474/94230402 0.0% 68/453 15.0% 128770119 61444436 +3088 chr4 + 190214555 180439396 180439395 180439447 52 TCATTTTATTATTATTATTATTATTATTATTATTATTTATTCTTTTTTTTTT chr4 - 94230402 19519667 19519666 19519718 74710685 74710684 74710736 52 TTACTTTATTATTAGTAGTATTATTATTATTTCTCTTTATTTTTCTTTTGTT .:.:..........x..x.............x:.x......:..:....x.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 160919729 29294826 +3141 chr4 + 190214555 180447054 180447053 180447108 55 AGTGAGACCCTATCAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAA chr4 - 94230402 87676333 87676332 87676387 6554016 6554015 6554070 55 AGTGTATTCCTACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAA ....x:x:....:................:.:...:...:...:....x.:x... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 92770721 NA +3117 chr4 + 190214555 180450795 180450794 180450857 63 GAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAGTCAGGAAGGAAAGA chr4 - 94230402 71886270 71886269 71886332 22344071 22344070 22344133 63 GAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAATGAAGGA ...x:...:.x...:.........:.......:....::x..:.::..:.::.:..x...:.. 63M 44/63 69.8% 63/94230402 0.0% 0/63 0.0% 108564525 81650030 +3731 chr4 + 190214555 180457868 180457867 180457941 74 CTTCAACCTCCACCTCCCGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..x..:..:xx.x..:.:.........:.x...x.xx.x........::.x.........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 162260742 27953813 +3111 chr4 + 190214555 180464421 180464420 180464491 71 TTCTTATGAATTTATACACACACACACGCACACACACACACACACACACACACACACACACACGAGAGCAG chr4 - 94230402 38535886 38535885 38535956 55694447 55694446 55694517 71 TTCTCAACAATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACAG ....:.xx...x.........::...:.x:x.:.....:.......:::::.:::.::..:..:...:... 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 141928535 48286020 +3025 chr4 + 190214555 180471757 180471756 180471825 69 AACACCTCCTCACAAATAAACTAGAAAATCTGGAAGAAATGGATACATTCCTGGACACATATACTCTCC chr4 - 94230402 16383571 16383570 16383639 77846764 77846763 77846832 69 AATACCTGTCAGTAAACCAGCTGATACATCTGGAAGAAAGGGATACGTTCTTGGGCATACAGATCCTCC ..:....x::x::...:x.:..::x.x............x......:...:...:..:.:.x.::.... 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 164088186 26126369 +3256 chr4 + 190214555 180477261 180477260 180477349 89 ATATTTTTAATCAT-------------TTGTATTTGTGTGTATGTATATATATGTTTATATGTGTGTGTATATATATATATACACACATAATGTATAATTGT chr4 - 94230402 70982601 70982600 70982702 23247701 23247700 23247802 102 ATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATGGTCAAGTCATCTTGGATTGT ....x....x....-------------....:.x.....:.:...:..:.......:...x:.......::...:.:.:..:xx..x:.x..x.xx:..... 14M13I75M 63/89 70.8% 102/94230402 0.0% 13/89 14.6% 109494660 80719895 +3349 chr4 + 190214555 180477303 180477302 180477361 59 TTATATGTGTGTGTATATATATATATACACACATAATGTATAATTGTATTTATCATTAG chr4 - 94230402 61428355 61428354 61428413 32801990 32801989 32802048 59 TTGTATGTGTGCGTATATACATATATACACACATAATTTTTTAATGTATCAATGGATAG ..:........:.......:.................x.x.x.x.....:x..x:x... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 119048948 71165607 +11929 chr4 + 190214555 180479013 180479012 180479407 395 CCTAGTAGTTTAATTAAGGCGCATGGACAACTTCATTTTTAAAATATAGTCAAAAATACTTCAGCTCTATGATTACTAAATAGTATGCTATGTCACTTCTCATTTTTTAAGGTACAGCATTGTTAGAGAATTTTTACAAAAACAGCCATCAATAATGATGAATTTAGATACATCCCAAATGAGTTAATTAAAATGACAGCAGAATTTCACT-----TAATGATCTTGCTGC--------------AAATATTCATTCTGAACTTGAACATGTTACTTTTTAAAATGCCCAGTGCTCAACACAGCAGAAATTAAACTGAAAAAATTAATGCT-------TTAAACATGTTAAAAGGGGTAACTGCCATCTGCTCTCATTAGGGGTGTTAATATACATTAAATGCATCATATTATAAAATAGC chr4 - 94230402 51669810 51669809 51670210 42560193 42560192 42560593 401 CTTGATATTTTAATTAACTT-TATGGATAACTCTATTTTTAAA-TACAGCAGATGATGTTTTAACTACACAATTAGCAAGAAGAATGCTG--------CTCACTTTGAGAAGCACCATGGTGTAAGAAAAGCATTA--AAAACAGTTATCGATAATGATGAATTTAGATGCATCCCTAATGAG----TTAAAGTGATAGTAAAATTTAAATTTTAGTAATAATTCTACTGCTGACAATGAGATGAAAGCGTTTGGGTAGATTTTTAGCATCTTACCT----AGATGCCCAGTGGACACAGCAACAGAAATTAAGCCTAAGTAATTAATACTAACAGAAAAAAAAATGTTAAAAGCAATAATTGCCATCTGTTCTTGTCAGTATTATTAATGTGCATAGGATGGCCTTTATTACAAAATAGC .:.::..x.........xx:-:.....:....::.........-..:..:x:.x:..::..:.:..x:.::....x:..:x..x.....:--------....:...xx:.:.:..x:::x...x...:..x:x...--.......::...:..................:......x......----.....:...:..:.:.....x.x.-----....:..::.:....--------------..:::..::xx:x..x:..x.:...x....:.----.:..........xx..xx:..:..........:.:x..:x.......:..-------xx...x..........x::...:.........:...::.:..x:x.:.....:.:...x::...xx::x.....:........ 20M1D22M1D46M8D38M2D45M4D24M5I15M14I32M4D50M7I83M 259/375 69.1% 401/94230402 0.0% 46/375 12.3% 128809203 61405352 +3802 chr4 + 190214555 180479537 180479536 180479615 79 CTGCAACCTGTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGTCACCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..::x:x..:.............x...x.xx.x........::.............:....--.::x...... 67M2D10M 58/77 75.3% 77/94230402 0.0% 2/77 2.6% 162282411 27932144 +3036 chr4 + 190214555 180486074 180486073 180486141 68 TAAAATTTTTATGCTGCTAAAAAAAAAAAAAAGAAAAAACAAAGAAAAACCTGCGGCAAATTTTTTTT chr4 - 94230402 10214663 10214662 10214730 84015673 84015672 84015740 68 TAAGGTTTTTATAATGCTGAGCATTAAAAAAAAAAAAAAGAAAGAAAGATTTGGGGCATATGAATTTT ...::.......:x....:.:x.xx.......:......x.......:.::..x....x..xxx.... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 170271411 19943144 +3013 chr4 + 190214555 180507624 180507623 180507678 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAGAAAAAAGAAAAGAAAG chr4 - 94230402 72165101 72165100 72165155 22065248 22065247 22065302 55 AAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATAAGGAGAAAG ....x.....x..:.:.......:.......:.x.x...:....x:.::...... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 108342523 81872032 +3231 chr4 + 190214555 180540067 180540066 180540143 77 CACAGTTTGCTTTTGTTGTTGTTGTTGCTGTTGTTGTTGTTTTACTGGTTTTTCTTTCTTATTTGTTTGGTTAATTG chr4 - 94230402 33381007 33381006 33381083 60849320 60849319 60849396 77 CATAAATTGCGATTTTTGTTGTTGCTGCTATTGTTGTTTTTTGTTGGGTTTGGTTTTTTTTTCTGATTGCTAAATTG ..:.:x....xx..x.........:....:........x...xx:x.....xx:...:..x.:..x...x.x..... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 147159060 43055495 +3032 chr4 + 190214555 180568464 180568463 180568517 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAGAAAGTCATACTTCTTTCTG chr4 - 94230402 20778948 20778947 20779001 73451402 73451401 73451455 54 AAGGAAAAAAAATAAAATGGAAAAAAAAAAGAAAGGAAGTCATACTGCCTACTG ..::........x....x::.......:..::...:..........x.:.x... 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 159789516 30425039 +22392 chr4 + 190214555 180581864 180581863 180582458 595 TTATTAGCAAAATGCTTATTTTTACTACTCTAATGAGAATAATTATTTTTGTTCTA--AAGACAATAATATGGATGCAAAGGGCTCCACTTTAAAAGTGTCAGTGGTGT--TTGTATGACAGGTAATGAGGCAATTTGGCAGAACATCAGAAACTAATTGAGCTCAGCTCACATCAGTGAGGCTTGTTCAGCTGAGGCTGTGCTTCCTAAAAAGAACAGTGGAATTAAATGAGACAATGTGACATGTACAATTTTAATTGGAAGCTCTAATTTAAAATATTTAAAAGCATGTTTAAAACAATTTGTGAATCCATACAGATGCTTCCTTCCCCAACTAATTAAGAATATTCAGTGGGTCATATAATGTCTGGATGTCAAAAATATGAATTATTGACGTCCCTGCACACATAAGTATACTTGCACCTTTAGGCAAGATCAAATTTAG-TTTAACAGAGGGAAATGGGAAAGAAACAATCCTCGAGACTGCAGAAGGGTAGGTGAT------------TTTTA-ATGTGATATTTTGAAAACCATTGCAAGAATCATTAAATTGCACACCTATTTTGCAAAACTG------AAATTATATTTAAGCATATTTCAAAATAAGT chr4 - 94230402 51698392 51698391 51698978 42531425 42531424 42532011 587 TTCTTATTCACATTCTTATTTCTGTATTTTTAG-----ATACCTAACTTTCTTGCAGAAAGAGATTACTGTGCAT--AAAGAGTTCACCTTTGAAAGTGTCAGTAGTGTGCTAGTATGACAGGTAATGAGGCAATTTGGCAGAACATCAGAAACTAATTGAGCTCAGCTCACATCAATGCAGCTTTTTCAGCTGAGGC--TCCCTTATAAAACAACCGGTAGAATTACATTAGACAATATGACATGTACAATTTTAATTGGAAGTTCTAATTTAAAATATTT-AAAGCATGTTTAGAATAATTTGTGAATCTACACAGACACATCCTTATCTAATTAATTAAGTCTGTTCAGTGGATCGTATAATGAC----TGTCAAAAATACAAAGTATTAAAGTCTCTGCACATATAAATATTCAAGTAACATTCAAAGAGAAGGGATTTAGCTTTAGTAGAAAGA--------------AGGTCTCATACCTGCACACCGGTAGGTAATATTAACATGGAATTTTATATGTTAGATGTTAAAATA---TGTAAGTACTGTTAAAATAC-TATGGAATTTAGAAAGTTGGGTTTTGAATAGAACTTCAAAACattttaaaattaat ..x...x:x.x..x.......:.::xx:.:..:-----...x:..x:...x..x:.--....x.x..x.:..x..--....:.:..xx....:...........:....--.x...............................................................:..x:....x............--.x.:.:x.....x:.x.:..:......x..x.......:.........................:.................-............:..:............:.:.....::.x.....x:.:..:........xx.:........:..:.......x.----...........::..x....:.x...:.......:....:...x.xx.:.x.x..x::x:...xx::......-....::...::..--------------.:x:...:x:x.....x.xx.......:..------------.....-....x.x..x..:...xx---..:...x.:::.....x.:.-:.:xx.x...:x...::..------:...x:x.:..x.:x.:....:.....x.:. 33M5D18M2I17M2D32M2I87M2D82M1D85M4D73M1I13M14D30M12I5M1I18M3D20M1D19M6I31M 424/563 75.3% 587/94230402 0.0% 56/563 9.9% 128883472 61331083 +12069 chr4 + 190214555 180585514 180585513 180585845 332 TAAAGCTGACGTGATTTAAAAATAT-AATGAAGATATTTTAACTACATCAGAACTATTTCATTACAAA--CTCAAAAACTTGTGGTGACTAG--CTGCAGATTTATGACAGT----ATATAAATACAACCCCAACTTGGCAAATACTAACTTTTCCAGCAAAGTCATCG-GTGTTAGAGACTATAAAGTGTTTCCAGTGAAAGATGATTTGTGTCAGCTAAAACTGTAGCCTGGAGCTACACTTGAT--------ATGTTATTACTTTAATCTAGTTATTGCAGCCTTGAAGTGTGTGTTAGCAAGTCCAGGGAAGAAATGTCAAAAGCTCAACCTAGCCTGATTATTAA chr4 - 94230402 51701728 51701727 51702056 42528347 42528346 42528675 329 TAATTCTCATGTGATTTTGTAGTTTTCACTAAAGCATTTAAACTACACTGGCTCAGTCTTATCATGAATGCTTAAAAACATGTAG--ACCAGTACTGCAGATTAATGATAGTTGTAATATGGGTACA--------CTGGC-----------TTTGCAGCTAAGTCATTTTATGTTATAAAGCATAACGTGTGTCCAGTGAAGGATGACTTGTGTCAGCTAAATCTGTAGCCTGAAGCAACTCTTGGTGGGTTATTAGGTTATTACTTTAATCTAGTTATTGCAGCCTTGAAGCATGCATTCATAAGTTGAAGGTAAAAATGTCAAAAGCACAGTTGAGACTGATCACTAA ...xx..x.:.......x:x.:.x.-x.:x..:::....x.......:::.xx.x:.:.:..:.::..--..:......x...:.--..:..--.........x....:...----....:::....--------:....-----------...x....x.......:x-:.....x.:.x:....x....x.........:.....:..............x..........:...x..x....:.--------.x...................................::..::..x::....:x.:..x.:.............x..:::x..x.....:.:... 25M1I42M2I15M2D5M2I18M4I11M8D5M11D18M1I77M8I95M 234/311 75.2% 329/94230402 0.0% 39/311 12.5% 128883786 61330769 +3135 chr4 + 190214555 180606187 180606186 180606245 59 TCTAATGAGAGAAGGACTATGTGTGTGTGTGTGTGTGTGTGTGCACACGCACACGCACA chr4 - 94230402 25393249 25393248 25393307 68837096 68837095 68837154 59 TCTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACA ...:..:.:.:x:x.xx:......:...:...:.x.......:.....:.......... 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 155212938 35001617 +3103 chr4 + 190214555 180619952 180619951 180620020 69 CATTTTTTCATCATTATTTCTAACATTAACACAAACTATGTAAATGATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 72763469 72763468 72763537 21466866 21466865 21466934 69 CAGTCTTCCTGCATTGTTTGTAGTACTCTCACAAACAATGTCAAAGTTTTGTTGTTTTTTTTTTTTTTT ..x.:..:.xx....:...x..::.:.xx.......x....x..x.x...x..x............... 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 107856483 82358072 +3157 chr4 + 190214555 180623479 180623478 180623529 51 TTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAGAGATGGGGTC--TCACTCTGT chr4 - 94230402 51296819 51296818 51296871 42933532 42933531 42933584 53 TTTTTTTGTTTGTTTGTTTGTTTTTTTTTTAAACATAGGGTCCATCACTTTAT ...x...................x.......:.x..:.....--.....:.:. 42M2I9M 44/51 86.3% 53/94230402 0.0% 2/51 3.9% 129326660 60887895 +22038 chr4 + 190214555 180631189 180631188 180631993 805 GCAGATTAGATTCAAATCTAAAGCATTAAATGATTAGCAG---ATTGCACCTGGCAACAAACTCAGGTACTATGTCTTATGTCTTA-TGTGTTA-------GAGGTACAGTCAGATGAAAAGCAAGTGAAGAAATGGGAAACTGTACATTAAGTGGCTGGCTTGCAAAAAAAAAAAAATAGCCATCTGCAATCAGTTACAGTTGACTGCAACAAAAAATAGTTTCCAGGGATCAAAGGAAATGAAAGGCTGACCAGGGCAACCAGAATATCCCACAGTGTGTTAAATATTTATTACAGAGCCACTTTGCCCCCAAACAATCTGATTCCTGGCATATTTCCACTAAAATAGCTCATCAGTAATTAATTTGGTGTGCCATTTTGCCTAAAATTAGTAATTAATGTTAGTCTATGGGCATTATATTGAACTGTTTTCACCAAAGAATTCAATCTCCCTCCCTTTAAAAACGTGATAAAACAGCCATTTTACATTTTGTTTAGAACTTGAGCCATATATTAAAAAGAAAGAAGGAAAGACACAAAAGCATTGCAATCTCCATGAAGGAGACACCAAAG-TGATATTCTCAATTTAGTTGATGGTTTTCAAGGTCCTTGCATTTTTTCT-CTTCCACTT-CTTGATATTATGAGTACTATAATATGAATAGATCTTTCAGCCAGTCTCTGAGCTTTAATGAACTATTAAGGCATG------TTCATGGTATTTTCTTTTCAATGGTT-CTCTCTCAAAGTTTAACAGGTTGTAAATGGAAACCCTGAAAAATGATGCATTTTTC----------AAGTACCATTTTCCTGATCTTTTGAAA chr4 - 94230402 51721246 51721245 51722013 42508390 42508389 42509157 768 GCAGATCATATTAGAATACAA--TATTAAATAACTAATAGTGTATAGTCTCAGAAAAGGAAT---GGTCCTGCATTGTATGTTAAAATGTGTCACTACAAATAGTTTCAATCAGGAGAAA-GTAACTGAGGAAAAG--------TACATTAGA-----AGCTTGAACAAAAAA-------GCTGTTTACAATCAGTTACAGCTGTCTGCAACAAAAATTACTTTCTAGGGATCAAAGGAAATTTATGATTGACCAGTGTAACCAGAACATCTCACAGCATGGTAAATATTTAATACCATGCTACTACTGCCCAAAACAAACTGAGATTTGGCATACATCCACTAAAATAACTCATCGCTAATTAATTTGGCATGTCATTTTGCATAAAATTAGTAATTAATACTAACCACTGTGCACCATGGTGAACATTTTTCAGTTAAAGATTCAATCATAGTAGTTTCAAAAGCATGGTGAAATGGTCATTTT--------TTTATTATTC----------TTAGAAAAGAACTTGCACAATGGGAAGGGTATTGCAGCCAGTATGAAGGATATATCAAAGTTTATAGTCCAAATTTATTTGAGGTTGTTCAAGGTCAATGAATTTTTTTTCCCTCCACTTGCCTGAAATTATGAGTAATAGAACATGAATAAGTGGTGCACC---------GGCTGAAATGAACTACACTGATGTGTAGCACTCTATGTAGCTGTCTTTTAAGCTGTTGCACTCTCA---TTTAACAGGTACCAAATTTAACT------------TGCATTCTTCACCGTTTAAGAAGTAGCATTTACCTCTAGTTTTGTAA ......:.x...x:...x:..--:.......:.:..::..---..x.:x:.x.:x..x:..:---...x..:::.:x.....:xx.-.....:.-------x..x.x..:....:x....-.:..x...:....x.--------.......::-----:.....x.x......-------..::.:.:.............:..x............x..x....:................xx.x.::.......x.:........:...:.....::..x..........x...x:x..:...x:xx...x......x....xx::.......:x............:......:x............::..:........x.................::..::.xx..x...::..:x.....xx......x:x..::........x:xx.xx:..:....:.:..:.:...::.:......--------....xx.:.:----------...:...::..xxx.x.x.:xx:x..::.:......::.xx:........x.:.:.....-.x...x..:x......x....x.x.x.........xx..x.......:.-.:.......-.:...x..........x..x..:.......::.xx.x..x.---------:...xx.........:xxx.:::..------.::...xx::.x......x.::x...-.x......---..........xx:....xx..x:------------......:...----------.....x.....x...xxxx.....x.. 21M2D17M3I19M3D21M1I7M7I19M1D15M8D9M5D15M7D306M8D10M10D60M1I49M1I9M1I41M9D25M6I26M1I8M3D23M12D10M10I27M 524/737 71.1% 768/94230402 0.0% 99/737 13.4% 128909943 61304612 +8301 chr4 + 190214555 180637078 180637077 180637336 259 AACCTCTTTATTTTATTGTTCTTGTTTTGCAAGAGAATCTTTATCTTCCTGAACTGTGTGTGATTAATTATCACATAATACGTTAAGATAGCACTTTTTTCCCCTGAGTAAGCTATATTTCAGA-GTGGTTTTGTGATGTATAGATAAGCCTTTCTTGACATATGGAATGATTTAGAGACAGAGACAGCAGAGCTGCTTGGG--ATAAATGCTCTCCGTGGTGTAACGGTGAGCTTACCAAAATTTGTCAAGAGACAGAACT chr4 - 94230402 51724474 51724473 51724732 42505671 42505670 42505929 259 AACCCTTTTTTCTTCATTTTTTTTTCCAGAATGAGATGTTTTATGTTT-TGAACTTTGGGCAATTAATTGCATCACAGTAGATTAAGAGAATACTTTATTCC--TGACTAAGCTACATTTTAACTGAGGTTTTGTAATAAACAGGCAAGCTTTTCTTGACGTAAAGCAAGATTTAGGTACTATGACAGTGTAAGTGTTGGGGGAAAAAATGCTTTCTGTAGCCTAAAATTGAGTTTACAAAAATATATAAAGAAAGAAACCT ....::...x.:..xx.x..:..x.::x.x.x....xx:.....x..:-......x..x.::.......::xx..:.:..x:......x.::.....x....--...x.......:....:.:x-.x........:..:x.:..::....:.........:..x:.x.x.......:x..x:x.....::x.:x..:.x...--.x.......:..:..:.:x...x:x....:....x.....x.:.x....:.x.:.x.. 48M1D53M2D20M1I77M2I58M 173/256 67.6% 259/94230402 0.0% 6/256 2.3% 128912604 61301951 +3370 chr4 + 190214555 180641133 180641132 180641224 92 TAAAGATAATAGTTATATATTATCAGATATATATAATATATATTTTTTATATATATATATATATATATATATATATATCTGAACATGATGAA chr4 - 94230402 6803869 6803868 6803949 87426454 87426453 87426534 81 tataaatatCATGTTTATACTATCAG-------CAATATATATTTTTTATATACATGTATATTTATATGCATGCATTTGTGA----GATGAA ..x.:...x:.xx.x....:......-------:...................:..:.....x.....::..::..x.x...----...... 26M7D49M4D6M 63/81 77.8% 81/94230402 0.0% 11/81 13.6% 173837264 16377291 +3470 chr4 + 190214555 180642360 180642359 180642425 66 TTTTCTTTTTTTCCTTTTCTTGTGTTTTTGTTGTTGGTGGTGGTGGTGATGATGGTGTTGGTTTTG chr4 - 94230402 51318567 51318566 51318632 42911771 42911770 42911836 66 TTTTGGTTTGTTTTTTGTTTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTGGATTTG ....xx...x..::..x.:..x....x.....................:..:.xx.x....x.... 66M 51/66 77.3% 66/94230402 0.0% 0/66 0.0% 129323793 60890762 +12405 chr4 + 190214555 180647935 180647934 180648242 308 AGAAAGATCTTGGATTAAGTCATAATGATTACTAAGGGAAAGAATATTACCTTAAAATCCGTGAGTGACAAATGTCCAAATCGCTACTGTGAAGGTGTTTGAAGGTTGAAGACTCCTATTGAGAAAGCCACTATAGAAAGTGTGCAGAAAATTA---TTTTCTCACCTTTAATTTTATTATATAAATTGAATACTGCCTCTACTGA-------TCAAGTAATAAAGTTATTTTCATTTGTTATGCAAAGTCCTTTTCAAACAAATTATGGGGACTGATGGAGGAGATAGGCATTCTTCATTGAATCAAATAAAGAATG chr4 - 94230402 51731238 51731237 51731529 42498874 42498873 42499165 292 AGAAGTGTCTTGATGTAGATTGTAATGACTGCTAAAA---------------TAAAACCTGCAAGTGATAAATGAATAGGTTGCTATTGTGAAAGTGTTTAAAGGTTTAGGACTCCTACTGATAAAACCACCAGAGAGAGTTTGTAGAAAATTACTCTCTTCTCACCTTTAATTGCATTATTTAAGTTGAACATTTTCTTCATTGAATGGAGTGCAAATAATAAAACC-TTTTCATTTATTATGCAAAGTACTTTATAAACCAAATATAGAGACT-----ATAAGTTAGGC-----TTATTGAATTAAATAACAAATG ....:x:.....:xx..::.::......:.:....::---------------.....:.:.::.....:.....xx:.::.:....:......:......:......x.:........:...x...:....:.x...:...x..:.........---.:...............x:.....x...:.....:.:.x:..::.:...-------x...:.......:::-.........:...........x....x:....x..x...:.:....-----.x:..x.....-----.:.......:......x:.... 37M15D102M3I49M7I15M1D46M5D11M5D22M 212/282 75.2% 292/94230402 0.0% 36/282 12.8% 128916697 61297858 +3261 chr4 + 190214555 180667011 180667010 180667079 69 TCATTATTTATCTACATTGATTGGATGACCTTTGCCATCTATTTGCTAGCCTTTAAAAGATTTAAGTCT chr4 - 94230402 88783216 88783215 88783284 5447119 5447118 5447187 69 TCATTCCTCACCTGCACTCTTTGAACTACATTTGTCATCTACTTACTAGCCTTTAAAACAGCTTAGCCT .....x:.:.:..:..:.xx...:.:x..x....:......:..:.............x.x:.x..:.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 91883795 NA +14198 chr4 + 190214555 180674737 180674736 180675273 537 TTTGGAAAATGCCAAAAGCATCACTGAGGCCAAAA-ATCACCTAAGCAGGTGC-------CTTTATGCAA-----TCAGGCA----TTGCCA-TGAAAGATCTAGTTATCACAGGAGGCTTTTTCTCTGTCTCCTTCCTGGCTTGCAAATACTGTCAAGCTACATTAGCACCAAAAG---CAGTTAGATTGCAATGACCTTTACTAATCCACCACATTTATGTTTGGACTTTT---------CTCGCAATAAATGTAACATTACAATTATTAATGTCAGCGTTTTCTTTGGAAACAGTGGTGAACTCATTAAGAACACTGCCAGGTGTTGCCAACCCCAGGTGTGAACCTAGTGGTTAGTGAGATGTAAATAACTCTTTATGGAAAATTTGCAGTCTAACGAATTAGCAGTCTCACACAAAGCCAAACTAGTTTCCTGTGATTAGCTTCATTACACCACTAGCTGTTTTCCTGTAGGTCAA---AGAAAAAAGTAGCAGATGCCCCTCCTTTTAGAATATAAATCAGATTAGCATCTACCTCATTGCT---CGCTGTTTCCAAAGATAGCTGT chr4 - 94230402 51744400 51744399 51744942 42485461 42485460 42486003 543 TTTATTAACTGTTAAAAACATTCTTGAGGGGAAAGTATCTTTTTTGCAACTGATACGCAGCATTATGCAAAATATTCATGTGACATTTGTCAGTGAAAGTTTTTTTTAT------AAGCTTTTTTTCT---TCCTTTCT---TTGTCAATTA---CACTCTATATTAGCTCAAAAAATCACATTTGTAT--CACTGAGCTTT-TTAATTCATTCCCTTCTGGTTTGTATTTTTTTTTTTTTTCCTACGGTAAATGTGGCAGTGCAGTTATTGAAGTCAGCAGTTTCAGGGGAAATGCTGGTGAACTCATTAAGTGCACTGCCAGGTGCTGCCAACCCTGGGTGTCAGCCTGCTGCATATCGAGATATAAATAACGCTGTGTGGAAAAATTGCAGGCTAACAAATTACCTATCTTAGGCAAAGCTAAGCCAGTGTTCTGCAATTTGGTTT------------GCTGTTTAATTGTCAGCTAGCCCAAATGAGGGGAGCACATGCCCCTTCCTAGAAGATATGAATCAGATTAATGGCTGCCTCTTTACCAAAAGATTCTTCCACAGGTATCTGT ...:xx..x..::....:...:x:.....xx...:-...x::.xx...:x..x-------.x........-----...x.::----...:..-......x.:.xx....------.:.......:...---.....:..---...:x...xx---..xx...:......x.x....:---..x..:x..--..x...x....-:....:..::x.x..:xx.....x.:....---------.:::.::.......::..x.:..:.....:.x......:x....xxx.....::x................x:............:.........::.....x.:...:x..xx..x:.....:........x..x.:.......x......x.....:.....x.x:...:.x:......:..:.:...x.:...::...x.x..:------------.......xx:...x:.::.:---.:.x:.::.x....x........:.:.xx.::....:..........:::x..:....x..:.:---x.x.x:.....x..:..x.... 35M1I17M7I10M5I7M4I6M1I16M6D13M3D8M3D10M3D22M3I9M2D11M1D30M9I207M12D20M3I64M3I22M 355/507 70.0% 543/94230402 0.0% 66/507 13.0% 128930337 61284218 +3278 chr4 + 190214555 180687656 180687655 180687805 150 TGAGAGAAACTGAGCAATAGGACTAGAGTTCTACTATTATGGAAAAAAATAACATTCT--------TACCATAAGCCACACTAG-------ATTGAACACTATATATAAAAATATATATATGTATATATATTTTTATATATATTTATTTATATATTTATTTATAT chr4 - 94230402 73418483 73418482 73418645 20811758 20811757 20811920 163 tgggacaacTTCTGGAGCAGGCCTTGTATATTACTATTATCTAGTTATATCACAATTCATTTGAAATACTATTAGCTGAGCTCACTGTTGTGTTGGACACTGTACATATACATATATATTAGTGTATATATTTCTGTGTATATTAA--TAAAGATTTAGCTATGT ..:..x..x:.xx.x.::...x..x.x:.x:.........xx.:xx.x..x...x.::--------...:..x...::x:..x:-------:...:.....:..:...x.x........xx..:.........:.:.:......x.--..x.x.....x:...:. 58M8I18M7I55M2D17M 97/148 65.5% 163/94230402 0.0% 17/148 11.5% 107269173 82945382 +28559 chr4 + 190214555 180696599 180696598 180697088 490 AGATGAAAGATACTTGGAGCTTCCCTTGATATGTAATTCTTCTTGAATTGCATCATTCTGGGATGTTAATGTGTTTTTCCTGTCACATTATGAGATATAATACAGCTCTGGAAAGACTGGCAGTAAAGAAACATTGAGGACTAGAAATTAATTTCCTCAGTGGTTCCTGAAAAATTTCATT-------------AGCCCGGAGAGTTAATTTTACAGTTTTAGTGCAATCATTATTTATCATCTCTTGGTTTATGGGAAAGAATTAGAGTTATTAGCTATTAAATTATCCATGAAAATTTGACACTCCTTTAGACCAAACAAACCCTAGGGCTTGCTGATTTTCCCAGTGTGAAACATCTGTGGCTTCAGCTAGAAAGAACTTAACATTGTCTAATTAGATTTCTAAGATTTATAAGGTTCAAATACTTCATTATTAGAAACTGGAGAATTAGTGCAAAAGGTTAAATTCTCACTTATTCAAGTTTATTTAAAACATCCTTAA chr4 - 94230402 51759808 51759807 51760301 42470102 42470101 42470595 494 AGATCAAAGATATTTTCAGCATCC-TTGATGTATATTTCTTTTTGAATT-------TTCAGTGCATTTATTTGTGTTTTCAGTCACATTATGAGATGTG-TGCAACTCAGGGATAATTAGCAACAAAGAAACATTAAGTACCAGAAATATATCTTCTCAATGGTTCCTGttttttttttttttttttttttttAAGCTTGGAGGGTTAATTTTATGGCTTTAGAGCAATCATTATTTATCATCTCTCGGTTTACGGGAAAGAATTAGAGTTATTAGCTATTAAATTATCCATGAAAATTTGACACTACACTAGACCAAACAAACCCTGGGGCTTGCTGATTTTCCCAGTATGAAACATCTGTGACTTCTGCTAGAGAGAACTTAACATTGTCTAATTAGATTTCTAAGATTTATAACTCCCAAATACTCTATTATTAGAAACCTGAAAATTGGAGTAAAAGTTGAAACTTGCATTTACTGAAGATTATTTAAAACCTTTTTAA ....x.......:..xx...x...-.....:.:..x.....:.......-------.:::.x:::..x..x...x...:.x...............:.:-.:..:...x..:.x:.:.:...::...........:..x..:......xx..:.:....:.........xxxxx...:x..-------------...::....:..........::.:.....x......................:......:....................................................x.x:.................:.....................:.............:....x......:........................................xx::........::............:x..:....:.x.:.....x.x...:.:x..:...:.x...x...........x.::.... 24M1D24M7D43M1D81M13I309M 392/481 81.5% 494/94230402 0.0% 22/481 4.6% 128936791 61277764 +3153 chr4 + 190214555 180697519 180697518 180697650 132 TTCTCCCAAGGAAACCAACGGGCTTGTTTCTTAGACCTTTCCATATAGGAGACAGTGAAATTCAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACAGAGAGAACAAGTTTGGATGTAAATAT chr4 - 94230402 90685996 90685995 90686109 3544294 3544293 3544407 114 TTCTACCAAAGCAACAAGTTAG-TTATTTCTTC-ACGTTTC------------ACTTGAATTCA----CTTTTTTTACCCTTTTTTTTTTGTTTGTTTTTTAAATAAAGACAAGAAGATCGGCAGTAAATAT ....x....:.x...x.::x:.-..:......x-..x....------------.x.x:......----........x:::..........x...x.....xx..:.:...x..x...x.:..xx........ 22M1D10M1D7M12D11M4D64M 84/114 73.7% 114/94230402 0.0% 18/114 15.8% 90011523 NA +3000 chr4 + 190214555 180697571 180697570 180697611 41 CAGTGAAATTCAAATGCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 62215853 62215852 62215893 32014510 32014509 32014550 41 CAGTGACATTAAAATGCTCTTTTCTTTTTCTTTTTTTTTTT ......x...x.......:....:.....:........... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 118481718 71732837 +3028 chr4 + 190214555 180709575 180709574 180709639 65 AGTCAGGGATCAGGTTTTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTAACCAGTGACTCAGT chr4 - 94230402 69960033 69960032 69960097 24270306 24270305 24270370 65 AGGCAGCAATCTTGTTTTTTTCTTTTTGTTTGTTTGTTTGTTTTTTAATGAACTAGAGTCTTTGT ..x...x:...xx.......x:.....................x..xx.x...:..x.x..:x.. 65M 49/65 75.4% 65/94230402 0.0% 0/65 0.0% 110749542 79465013 +3012 chr4 + 190214555 180709604 180709603 180709665 62 TTGTTTGTTTGTTTGTTTTTTAACCAGTGACTCAGTCGGGTGCAGGAGAGTACTCAGCTCAA chr4 - 94230402 53059101 53059100 53059162 41171241 41171240 41171302 62 TTTCTTGTTCATTTGTTTTTTAAACAGTGGTTCAAATGGGTGAAGAATATTACTTTGCTAAA ..x:.....::............x.....::...:x:.....x..:.x.x....:x...x.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 127650503 62564052 +6002 chr4 + 190214555 180742906 180742905 180743146 241 TCTTAGAAGTATATAAAAGGAAGCCCTTGACAGCTATTTCTT--GCTTAGGTTGAGGCAGCAGTATACTGTTAGTATACTACATGGATCTCAAAATTTTACTAGATTCCACAGAATGGCTGAAGTGAATACAGATTTTAAGTGTCAAATCATACATAGCAAACATATTATTGTCTTTGGGATTT---ATACG-TTGTTGAGAATCAGAGAAATTATCAATGGCAATATTTTTTCTTCTTTGAAAGAT chr4 - 94230402 51779851 51779850 51780093 42450310 42450309 42450552 243 TCTTTAGAGCATGTAAAAGGAACACTTTAATGGGCATTTTTTTGGCTCAA-TTGATGCAGCTATGTATTATTAGCCTAGTGTAACTCTCTCAAAATTTTATGAGGCTTCACAGAGTAGCTGAACTGAACATAGGTTTTATGTTCCATACTTAACAGATCACGCAAGTTTCTGTCATTATCAGTTACGATATGCTCGGTCAAGTTCAGTCAGTCCACAAATG---ATGTTTTTTCTTCACTGTGTGAT ....x::..:..:.........xx.:..:.::.x:....:..--...:.:-....x.....x:.:..:.:....:x..x.::.xxxx.............:x..::.:......:.:......x....:.:..:.....x..x:..x.::xx...x.x..x:..x:..x:....x..:xx.x..---...:.-.:.x.x.::x....xx.:x::.:x....---..:..........x:..x:x... 42M2I6M1D133M3I5M1I28M3D23M 153/237 64.6% 243/94230402 0.0% 10/237 4.2% 128963055 61251500 +3166 chr4 + 190214555 180749667 180749666 180749757 91 TATCTCATTCTTTTCTATGG------------CTGCATAGTATTCAATGGTGTATATATGTGTATATATATATATGTGTGTGTGTGTGTGTATATATATATAA chr4 - 94230402 4406375 4406374 4406472 89823931 89823930 89824028 98 TATTTTATTTTTTCTCATGGGGATTGAGGTAGAAGCATATAACTCA-----GAATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATAA ...:.:...:...:::....------------xx.....xx.:...-----.x...::.:.:....xx....x:...................x:........ 20M12I14M5D52M 64/86 74.4% 98/94230402 0.0% 17/86 19.8% 176343292 13871263 +3032 chr4 + 190214555 180749710 180749709 180749756 47 ATATGTGTATATATATATATGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406469 89823934 89823933 89823980 47 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATA ...:..:......xx....x................:...x:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 176343287 13871268 +3062 chr4 + 190214555 180749792 180749791 180749830 39 TGTGTGTGTGTGTATATATATATATATATAAAACATTTT chr4 - 94230402 63396167 63396166 63396205 30834198 30834197 30834236 39 TGTGTGTGTGTGTGTATATATATATATATAATACATATT .............:.................x....x.. 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 117353625 72860930 +3009 chr4 + 190214555 180755907 180755906 180755973 67 AAGCACACATACACACACACACACACACACACACACACACACAAAAGATCAAAAAATA-AGAGTATTA chr4 - 94230402 56248437 56248436 56248504 37981899 37981898 37981966 68 AAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGATAGAATACCA .....x.x.:.x...............:.....x...xxx......:x....x...x.-...:..::. 58M1I9M 51/67 76.1% 68/94230402 0.0% 1/67 1.5% 124507470 65707085 +3032 chr4 + 190214555 180759001 180759000 180759102 102 AAGTGATATGCTATCGTGTTCCCCATTTAACAGGTAAGAAAACTGAAACACAAAGAAGTTAAGTCACTTGCTTAAAATCACACAGCTAATAAGCATCAATAT chr4 - 94230402 15193207 15193206 15193308 79037095 79037094 79037196 102 AGGTGGAAAATCATTATTTTCCACATTTTATACTTGGAGGAATTGAAACTCAGATAAATAAAATAACTTCCCTAAGGTCATACAGCTTGTCAGAAATAAAAT .:...:x.x:::..::.x....x.....x.:.xx.:::::..:......x..:.x..:.x..:.x....x.:...::...:......x:.x..x.x:..x.. 102M 62/102 60.8% 102/94230402 0.0% 0/102 0.0% 165565794 24648761 +21247 chr4 + 190214555 180764314 180764313 180764737 424 ATTTTCTCTGTAGGCATTTAAATATATATAACTTGATTATTAATT-----------CAATCAAATTATGAGTGATGCCTATTATCTTTATGAATAGATATAAAAAGCATATAGATATGAAAGAAGCATTGATGTGGAAAATACTACAATAACAAATCTTATAAGAA--AGAATTTTAGAAATAACTTGCCAGAAGGGTAATGACCTCAATTAAATTTTATGTGAAATAATAATTGGTGATTTTAATAAAGAAACACTATTGCAAATTGCATATTTGATAATATAATATTTTGGTATTTTTAAACTTCCCTCTGGCTTGCATTTATATTAAATAAAAATCTTGGAGATAATCAAGTAAGATTTATAATTTAAAGTGGCTTTTCTTTCAACATACTCAAGTAGCTTTTAAATAGTTTTAAATTCGAAAGGATGGAGAAA chr4 - 94230402 51783147 51783146 51783565 42446838 42446837 42447256 419 ATCTTCCAGATAAGTAGTTTAATAGATA--GCTTTCTTATTAATAACAAAATGATACAATCAAATGAGGGGTAATTTCTATTATCTTTATAAATAGATA--AGAAGTATATAGATGTGAAAGAAGCATTGATGTGGAAAATGTTAAAATAACAAATCTTATTAGAAGAAGGAATTTAGAAATAACTTGCCAGGAGGGTAATGACCTCAATTAAATTTTATGTGAAATTATAATTGGCGTTTTTAATAAAGGAATGCTGTTGCAAATTGCCTATTTGATATCATAATATTACAGGACATCTTA--TTTCCTCTGGCTTGTATTTATATTAACTAAAAATCTTTGAGATAATCAAGGAAGATTCATAA------------GTTTTTGGAGTCTGCTCAGGTAAGTTTAAGTCAGCTTTCAGTAGAAAAAAAAGGAGTAA ..:...:xx:..:.:.x..x....x...--:...xx........x-----------.........x.x.:..:..x:.............:........--.:...:........:.........................::..x...............x....--..:.x...................:..................................x........:.x...........:..::..:...........x.........x:........x::.x.:x.:.x.--..:...........:...........x..........x............x......:....------------x..:..xx.::x.:....:...:x...x.:x:..:...x.:.xx:...::.x....x.. 28M2D15M11I43M2D65M2I134M2D62M12D59M 326/406 80.3% 419/94230402 0.0% 31/406 7.6% 128981167 61233388 +3023 chr4 + 190214555 180784066 180784065 180784118 53 TTGTCTAGATTCTTCTTGGCCTCTCTGTATGGCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 50302317 50302316 50302369 43928034 43928033 43928086 53 TTGCCTAGGTTACACCTGGGCTCTCAGGATGACTTTTTTTTTTTTCTTCTTTT ...:....:..x:x.:...x.....x.x...:.............:..:.... 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 130481749 59732806 +3064 chr4 + 190214555 180784228 180784227 180784290 63 AATTTCTTCTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAGGAGTT chr4 - 94230402 18929910 18929909 18929972 75300431 75300430 75300493 63 AATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAAGTAGCT .......:::...:.:.::...................xx.:::x...x.:.x.....x..:. 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 161854318 28360237 +7073 chr4 + 190214555 180798004 180798003 180798488 485 ATCTATGTCTTCTT--GTGCCAAAAAACTATAAGAAATAATGCCAGATGTAATGAATTTACTAAATTTATTAAAACATTCCATTTTACATGGGGCAAAAACTCATATTCATTTTCTATAATATTTGGGGCCAAAAAGGA---------TGGCATGATTCAGTCCCTCACAACTGGGCAGTTGTCCAGGTGTGAGCATTGCTGAAGCCGTTTTAAAAATTCTTTTCAATTCAATTTTAATGGAACAAACTGCCAGAGACGTGCCAGGAAAATTGTTCCTTAACATTTGCCT---GCAGGATCCTGACCCCTAATGTCTTTACCAGGCTGATAACTTCTGGGCAGCAGAATAAGCCGGTATTCATGAACTCTCTCAGCAGATTCACTGCTGGAGGGGAGGGCACAGTGATGTCGTCTGAGAACTGCCTCTGGTGAATGCCATTAGCTTGTGAATTATTCCAAGTACATTAAGAGAAACTAATGACACCTTTGTTAGCTAAT chr4 - 94230402 51796030 51796029 51796469 42433934 42433933 42434373 440 ATCTTTTTTTTCCCCAGTTTCTGAAACTTATAAGAGATAGCAC--------ATTAACATCTGAAATTT-TTAAAAAAGGTGACCTTACAACTG--------TCTGATTCCTCCTCCATTCTGTTGTGAGCCAGGCAGAAAGCATTACTTGCCAAGCTTCAGTTTTT---GTTTGGGCAGTTGCCAACATGTAAGTTT-----------------------------ATTTAATTT-ATTGCAATGTACTTTTTGTGATGTGC--ACCAAACTGTTCCTTC-CATTTTCCTTGAGCAAAATTCCAAC------TATCTGAAAGCTACTGATAACTTCTAGCCAAATGAAGAAATCTGTTTATATGGATTTTCTCTGCAGATGAATTGTTTAATTGGAGAGCACAGCAATTCTGGTGGTGGATTGCTACAAATGAATGAAGTTAGTGAGTGAATTATTCCAAGTCCATTAGGATATCCTGGAGAAGTCTTCATTAACTAAT ....x.x.:...::--..x:.x:...x:.......:...:::.--------..x..:x.x:x......-......x.xx:x.::.....xxx.--------..xx....x.::..:..xx.:..xx.:....::x..:.---------..x..x.x......:::.---:x:..........:.x.x:...:..:x.-----------------------------...:.....-.x..x..::x...x::x.x..:....--:xx...:........x-.....x...---...::..:.::..------.:...xx.xxxx:............:.x..:xx...x..::.x..x.x:...:.:.:....x......xx.:..:.x:.xx....:......::..x::.x:x.x.:.:...:x.x::......xx:....:xx................x.....:..x.xx..::x..x::...::...:..... 14M2I27M8D17M1D24M8D38M9I18M3D28M29D9M1D26M2D16M1D9M3I13M6D187M 271/426 63.6% 440/94230402 0.0% 73/426 17.1% 129001974 61212581 +22642 chr4 + 190214555 180804585 180804584 180805054 470 TTACGTCCTTTGTCATGAGTCTCCATTCTGCCATGTTTCTTAGGATATT--AACGTAACAATGTCAAATGGGATTGAAGCTGAGAAAAATTACCTGAGGGCATTTTTGTTTTGTACTTAAATTTTATTTTGTCACTTATTCTTATTAGCAATCATTAAGCAATTTAATAATTATAAGCTCCATTAACATTTTAATGAGTCTAGTGGCCATTGCTAAGTGTAATTAAATTAGTTTTATTGTATGATATTTTGAAGCTGTGATTAAATTAAGTTTTACTGTGCTTAGAAGAATAAACCTATAGAGATTGCTATTCACCAAACATCTTATTAACTTATAAGATACTGATAAAATAGACATTAATGGAGACAGGAGAAAAATATAATTCCCTATTGAGTCTATTCAT--GAGATAAAACTTTAATCATTCAGTTTGGAATCAA-TCTAATAATGACGGTGTAATTTTATTTAAAAGAGT chr4 - 94230402 51798594 51798593 51799065 42431338 42431337 42431809 472 TTATTTCCTATTATCTCAATCTTTAATCTGCCTCATTTTTCTAAATACTGCAAAGTAACTATGTCATGAGAAACTGCCACTTAGAAAAATTACCTGAGGGCATTCTGACTTTCTGCTTGAGCTTTATTTTGTCATTTATTTCTATTAACAATCATTAAGCAATTTAATAATTATAAGCCTCATTAGCATTTTAATGAGACTAGTGGCCATTGCTAAGTGTAATTAAATTAGTTTTATTGTATGATATTTTGAAGCTGTGATTAAATCAAGTTTTACTGTGCTTTGAAGAACAAACCTATGGAGATCTCTCTTCAATAACAGTCTTGTTAACTTATGGGGAGTCTGTAAAATAGACATATCCAGGAAAAAAGGAAAAAT---ATTCCCTGCTGAGGTTAATCATAAAAGATGAAAAATCAAATGCTCCTGCTGCCATCAGCTCCAAGATTACCAATATATTCTTAGTGATAGTAGT ...:x....x.xx:x.x.:...::.x......x::...:.:x::...:.--..x.....x......x:x.::.:..xx:..x......................:.x::...x.:...:.::............:.....::.....:..............................::.....:............x...................................................................:................x......:........:.....:x..x....x:..xx:....:.........::.:x:::x:............xxx::.::.x.:::.......---.......::....x:..x....--:....:...xx.:..x:::..xxx:..xx....:-..:..x.x.:x.::.:..x.:...x.x.x.:x... 49M2I327M3D22M2I34M1I35M 348/467 74.5% 472/94230402 0.0% 8/467 1.7% 129005991 61208564 +3326 chr4 + 190214555 180805349 180805348 180805423 75 GTTGGTATTTTTGGTGGTGGTGGTATTCTTTTTTTTTTTTCTTTTTTTTTTTTTTACTGTAAACCAGTTTGAAAC chr4 - 94230402 48986007 48986006 48986079 45244324 45244323 45244396 73 GTTGTTGCTTTTGGTGGTGGTGGTGGTTTTGTTTTGTTTTATTTATCTTTTCCTT--TGCACAGCACTTTAAAAC ....x.::................:x.:..x....x....x...x.:....::..--..:.x.x..x...:.... 55M2D18M 55/73 75.3% 73/94230402 0.0% 2/73 2.7% 131819342 58395213 +3002 chr4 + 190214555 180805352 180805351 180805401 50 GGTATTTTTGGTGGTGGTGGTATTCTTTTTTTTTTTTCTTTTTTTTTTTT chr4 - 94230402 34925856 34925855 34925905 59304498 59304497 59304547 50 GATGTTCTTAAACGTGGTGGTTTTCTTCTTTTTCTCTCTTTTTTTTTTTT .:.:..:..::xx........x.....:.....:.:.............. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 145879496 44335059 +3086 chr4 + 190214555 180805356 180805355 180805399 44 TTTTTGGTGGTGGTGGTATTCTTTTTTTTTTTTCTTTTTTTTTT chr4 - 94230402 61200321 61200320 61200364 33030039 33030038 33030082 44 TTGTTGGTGGTGGTGGTTTTCTTTTTTTTTCTTTTTTACTTTTT ..x..............x............:..:...x:..... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 119605035 70609520 +16835 chr4 + 190214555 180805553 180805552 180805836 284 GTCTTTATTGCTACTGCTG---TTACATGATAAA-TTCTGAAATGCTCTCAAGAGTAAAATGAGATAGTCTTATTTTCTGATGAATTGCCTTATATAGAATGCAGTTAAGCATTTTACAGGATAGTAATTTGTATAGCATGTACAGCACATGTTTACTTATGGGAATTATGTGGTTTTGCTGTAATTATTAGATTCTATTGATTGTATTCCATTATGTTAATGTTTCTAAAATAAGC-ATATCAAGCAATTTTATGTCACATAATATTTCAGAAGCCTTGGGGATATTA chr4 - 94230402 51801380 51801379 51801667 42428736 42428735 42429023 288 GTTTTAACTGATACTGCTAGGATTACAGAAGGAAGTTTTGAAATACTCTCTGGAGTATA-CGAGATAGTTGTGCTTTCTGATGAATAGCTTCACAGAGAATGTAATTATGCATTTTACAGGATAGCAATTTGTATACCACATAAAGCACATGTTTACTTTTGGGAATTTTGTGGTTTTGCTGTAATTATTAGAGCCTATTGATTGTCTTCCATTATGTTAATGTTTCCAAATTAAGCAATATGAAGCAATTTTCTGCCATGCTGTATCTCAGAAGCCTTAGGGATATTA ..:..x.:..x.......:---.....x:.x:..-..:......:.....x:.....x.-:........:x.::............x..:.:.:.x......:.:...x................:..........x..::..x...............x........x........................x:...........x....................:...x.....-....x..........x..:..:::x:...:...........:......... 19M3I12M1I24M1D177M1I51M 234/283 82.7% 288/94230402 0.0% 6/283 2.1% 129004173 61210382 +3151 chr4 + 190214555 180818899 180818898 180818960 62 TGTCCACCATGATTGCAGGTTTCTTTCTTTCTCTTTTTTTTTTTTTTTTTTTTTGAGACAGA chr4 - 94230402 50117635 50117634 50117696 44112707 44112706 44112768 62 TGTCTTCCAAGACTGTGTATTATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAGCAGA ....:x...x..:..::x:..x:.:...:.....:..................x.x::.... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 130701264 59513291 +4904 chr4 + 190214555 180823426 180823425 180823829 404 TTCTCATGACTGATTTCTCTTTTGGCCTCTCTCTCCCTCTCTC-TCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTC---------TCTCTCCCTCTCTCTCCCTCTCTCT-----CCCTCTCTCTCCCTCCCTCCCTCTCCCTCCCTCTCCCTCC---------CTCTCCCTC-CCTCCCTCTCCCTCCCTCTCCCT--CCCTCTCCCTCCCTCTCCCTCCCTC---TCCCTCCCTCTCCCTCCCTTTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCTC--CCTCCCTCCCT---CTCC------CTCCCTCTCCCT----------------------------CCCTCCCTCTCTCTCCTTCTCTCTCCCT-----------CTCTC----------------------TCCCTCTCTTTCCCTCTCTTTCCCTCTCTTTCCACCCCGCA--CCCCCACTACCT chr4 - 94230402 9816746 9816745 9817246 84413157 84413156 84413657 501 tcctCGTGGGTCATCTCCCACTT---CTCAAATGCCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTC---CTCCCTCTTGATGACAGCCCTCTGTCACTCACTCTTT-TGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCTGGACTCCGTGGATCTACCTCTCCCTAAGTGAAGGTACTGAGCAGGGCACTCAGCCCTGCCTTGCCCTACTCCGCCCTGCCTAAGGAACCTTATTCTCAGCCAATAATAATAATCCCAAAtccttctctccccgcttccttcctgctccctcctttcagcgattcctcacggcct .:...:..:x.x..:..:.x:..---...xxx:x...x:....-.x....x.::...:.:.....x.:.:.x....:x.::.::x.x...---------.....x....---........:xx.-----......x..x.:.x.:..::-.x..x.x.::.:x:....:---------:..:..:..-....::.x.:.:...xxx.:..x--......:.:...x:x....x..:..---..x.x.:.....x.x:..xx:...x...x.::.x.::..:..:.:.:.x..:..x.x.:.x.x:::..x......::...--.x:.::.....---....------..x.........----------------------------....x...:x.:..x..:.x.:..x...-----------:....----------------------...:.....::..x::..:....:x...::...x::.x..:--:..:...x:... 23M3D17M1I46M9I10M3D12M5I20M1D19M9I9M1I23M2I25M3I80M2I11M3I4M6I12M28I28M11I5M22I41M2I12M 255/397 64.2% 501/94230402 0.0% 111/397 28.0% 171006680 19207875 +5900 chr4 + 190214555 180823429 180823428 180823821 393 TCATGACTGATTTCTCTTTTGGCCTCTCTC-TCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTC---------TCTCTCCCTCTCTCTCCCTCTCTCT-----CCCTCTCTCTCCCTCTCTCT-----CCCTCCCTCCCTCT--------CCCTCCCTCTCCCTCCCTCTCCCTCC-----------CTCCCTCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTTTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCCCTCTCC---------------CTCCCTCTCCCT----------------------------CCCTCCCTCTCCCTCCCTCTCCCTCCC---------------------------------------TCCCTCTCTCTCCTTCTCTCTCCCTCTCTCTCCCT-------CTCTTT----CCCTCTCTTTCCCTCTCTTTCCACCCCGCACCCC chr4 - 94230402 9816756 9816755 9817277 84413126 84413125 84413647 522 TCATCTCCCACTTCTCAAATGCCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTC---CTCCCTCTTGATGACAGCCCTCTGTCACTCACTCTTTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCTGGACTCCGTGGATCTACCTCTCCCTAAGTGAAGGTACTGAGCAGGGCACTCAGCCCTGCCTTGCCCTACTCCGCCCTGCCTAAGGAACCTTATTCTCAGCCAATAATAATAATCCCAAAtccttctctccccgcttccttcctgctccctcctttcagcgattcctcacggcctttcctttctctctcctcctgcacctctcccc ....xx.:x.:.....xxx..x..x:....-.x....x.::...:.:.....x.:.:.x....:x.::.::x.x...---------.....x....---........:xx.-----......x..x.:.x....:.-----.x..:::x:.....--------::::....::x....::.x.:.:...-----------.::.:...:..x.x::.:x...:..x...x.x.:.....x.x:..xx:...x...x.::.x.::.....:.:.:.x.:::.x.x.:.x.x:.::.x.....::....x::x...:...---------------..x.........----------------------------....x...:x....x.::.x....x..---------------------------------------...:......:..x::..::...:x...:....:.-------:..:.:----..:.::.....:.....:.:.::.x..x.x.... 30M1I46M9I10M3D12M5I20M5I14M8I26M11I118M15I12M28I27M39I35M7I6M4I34M 249/390 63.8% 522/94230402 0.0% 135/390 34.6% 171006673 19207882 +4158 chr4 + 190214555 180823466 180823465 180823733 268 CTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTC-----TCCCTCTCT-CTCCCTCTCTCTCC-------CTCTCTCTCCCTCTCTCTCCC-TCCCTCCCTCTCCCTCC---------CTCTCCCTC-CCTCTCCCTCCCTCCCTCTCCCT--CCCTCTCCCTCCCTCTCCCTCCCTCT-CCCTCCCTCTCCCTCCCTCTCCCTCCCTTTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTC--TCCCTCCCTCCCTCTCCCTCCCTCTCCCT-----------CCCTCCCTCTCCCT chr4 - 94230402 9816790 9816789 9817097 84413306 84413305 84413613 308 CTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTCCTCCCTCTTGATGACAGCCCTCTGTCACTCACTCTTTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCTGGACTCCGTGGATCTACCTCTCCCT ...x..:..::.:..:..x::.:.x:....x.::..:x.x...-----::x:.....-.::....:....:x-------.:....x..x...x....:::-..x.x.::.:x:....:---------:..:..:..-.....::x.:.:...xxx.:..x--......:.:...x:x....x..:..:-.:.x.x.....:.x.x::.xx..:.x.::x..::x::...::.......x..:..x.x...x.--.::.x......::...x::x...:.....-----------x:..x......... 43M5I9M1I14M7I21M1I17M9I9M1I23M2I26M1I63M2I29M11I14M 165/268 61.6% 308/94230402 0.0% 40/268 14.9% 171006676 19207879 +5164 chr4 + 190214555 180823490 180823489 180823777 288 CCCTCTCTC-TCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTC---------TCTCTCCCTCCCTCCCTCTCC-------CTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCT--------CCCTCCCTCTCCCTCCCTCTCCCTCCCTCTCCCT--CCCTCTCCCTCCCTTTCCCTCCCTC---TCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTC--TCCCTCCCTCTCCCTCCCTCCCTCTCT-----CTCCTTCTCTCTCCCTCTCTCT chr4 - 94230402 9816777 9816776 9817097 84413306 84413305 84413626 321 CCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTCC-TCCCTCTTGATGACAGCCCTCTGTCACTCACTCT---TTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTTCTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCTGGACTCCGTGGATCTACCTCTCCCT ...x:....-.x....x.::...:.:.....x.:.:.x....:x.::.::x.x...---------.....x.....-.......:x-------.:.:..x..x...x....---.::x..x.x..:::x:.....--------::::....::x....::.x.:.:...xxx.:..x--......:.:...x:x....x..:..---..x.x.:.....x.x:..xx..:.x...x..::x::...::.......x..:..x.x...x.--.::.x.....::....x::x...:..:-----....x.xxx...x......:.. 9M1I46M9I11M1D9M7I18M3D21M8I34M2I25M3I62M2I27M5I22M 182/284 64.1% 321/94230402 0.0% 41/284 14.4% 171006713 19207842 +4828 chr4 + 190214555 180823510 180823509 180823797 288 CCCTCTCTC-TCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCCCTCCCTCTCCCTCCCT-CTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCTCCC-TCCCTCTCCCTCCCTCT--------CCCTCCCTCTCCCTCCCTTTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCCCTCCCTCTCCCTCCCTCCCTCTCTCTCCTTCTCTCTCCCTCTCTCTCCCTCTCTTTCCCTCTCTTT chr4 - 94230402 9816777 9816776 9817072 84413331 84413330 84413626 296 CCCGTTCTCATACCTCGCCTTCCTTTTCTCTACTTTTATCTCTATTCCCTGCACTCAGTGCCTGTTCTCTGCCTCCTCCCTCTTGATGACAGCCCTCTGTCACTCACTCTTTTGTCACACTTTTGTCCTCTGTGTAAAATTTCCCCTTCACCTCTTTATTCTTCCAGATTCCAAACCCTCTT---CTTCCACATCCCGCCTTCCGCTCGCACTCTCTCACATCCAACCCCACCCACCTCATTTCTTTCTCCCTCACCTTCACGCCCACATTTTCACCCTCCTCCTCATCGCCTTTCCCT ...x:....-.x....x.::...:.:.....x.:.:.x....:x.:..::x.x...xx.x...-:..:..x....::..::.:.xx:xx:xx.:.:..x..x...x....:::-..x.x..:::x:.....--------::::....::x....::.x.:.:...xxx.:..xxx.:...::---..:..x.x:..:x...:..x...x.x.:.....x.x:..xx..:.x...x..::x.::..::.......x.::..x:x.:.x.x:::..x.:....::...x.:x...:..::. 9M1I53M1I49M1I17M8I43M3D114M 162/285 56.8% 296/94230402 0.0% 14/285 4.9% 171006733 19207822 +3470 chr4 + 190214555 180847127 180847126 180847185 59 CTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:...........::x...x.xx.x.........:::...........:....x.... 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 162649988 27564567 +8097 chr4 + 190214555 180854155 180854154 180854396 242 TGAGAAATAATTTTCACT-GCCTT----TTATAGTTTTTAATTTATG----------AAAATAAACTAAAACC-------------ACGATAATACAGTTTTAATACTTATTTATGAACATAAAAGAATCTTATTAGCTATTGTAATTTAGACTTTATTGTATTTTAAATTAACCTATTCATGTTTTTGTGACTTTTTAACAGGCAG-------------TAACTTCAAGGTGTTGTGGTGGATGTAGATTTTTGCTGCAAGGAAATAACAGTAAGTGTTTCT chr4 - 94230402 51813330 51813329 51813611 42416792 42416791 42417073 282 TAAGACATAATTTCTTCTTGCCCTGCATTTGTGATTTTTAATTCATGGAGAAAAAAAAAAAAAAAACAAAACTCAACAAATCTTAGACATTATTGTGGGTATATTTCTTATTTATGGTATGAAAAGATCCTTATTAGCTGTTGCAGTTCAAAGCTTATTCTATATTATATTAACATATTCATGTTGTTTTGACTTCTTAACAGGCAATAACTTCGAACACTAACTTCAAGCTTTCATTGAGAGCACAGA-TTCTATAGCAACGAAGTAACAGTAAGTTTTTTT .:...x.......::x..-...:.----..:.::.........:...----------....x...x:.....:-------------..:x..x.:::.x.x..x.x..........:xxxx......x:..........:...:.:..:.:.x:.....x...x...x......x..........x..x......:..........:-------------..........x.x.::.x.x.:::::...-..:.::x....x...:...........x...:. 18M1I5M4I19M10I16M13I121M13I29M1D33M 176/241 73.0% 282/94230402 0.0% 42/241 17.4% 129040825 61173730 +3297 chr4 + 190214555 180891173 180891172 180891225 53 CTCAAAAAACAAACAAACAAACAAACAAAAAAAAAGTGATTGGGAGCAGTAGT chr4 - 94230402 25147839 25147838 25147891 69082512 69082511 69082564 53 CTGAAAAAACAAACAAACAAACAAAAAAAAAAAAAGTGAAGTGTGACAATAGT ..x......................x.............xxx.x::..:.... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 155743334 34471221 +6012 chr4 + 190214555 180919166 180919165 180919336 171 AATTTTGGCATAGTTCCTGGAATAAGAATGAGGTAGATATAATGCACACTCTAAAACATTAA--GATGAACTTATCTTCGACAAATGGATTCAGCATCTAAATACCAAAGATACTTTAATTGCTTATTAACAACATTTTAAATTGTCTGATGAATGCACATTGTGGAGATATT chr4 - 94230402 51835371 51835370 51835529 42394874 42394873 42395032 159 AAGTTTGGCATAATTCTTAGAATGAGAATATGGAAGACGTAACACAC-CCCTAAATTACTGACCAATG-------------CATATTACTTCAGATTTTGAATACCAGAGATAGTTTAATTAGTCATTAACAACATTTTAAACTGATTGATAAATGATTGCTATAAAGAAACT ..x.........:...:.:....:.....:x..x...::...::...-.:.....x:.:.:.--:...-------------..x..x:x.....xx.:.:.......:.....x.......:x.:.................:..x:....:....xx:::.:.::...x.:. 47M1D14M2I4M13D92M 112/157 71.3% 159/94230402 0.0% 16/157 10.2% 129083795 61130760 +5250 chr4 + 190214555 180947529 180947528 180947706 178 TGCATTCGCAATTGTTAAAATGTTTTATTAGGACGTATATTTGGCATACTGCCCTCATTTCACTTTAGTGACTGAGACTGTTGCTTAAAAGAACGTTCTGTTTCCC----TGTAAGTACTTTCTAGTCATTTCCTAAATAGTAATGGAGGGACATTGCCCCCAGCAGGGAAAAAAGAGAATA chr4 - 94230402 51841667 51841666 51841848 42388555 42388554 42388736 182 TACGTTTACAGGTTCTGATAAGCTTCATTAAGACATTTCTTGGTGCCAGCGCCCCCGTTTTACTTTAGTAACTCGATCTACTATTTCAAAATGCATGGAGTTTTTCCACTTCTGTGCTTTTTCTAGTCGTTTGTTGAAGACAAGTGGAGTCACATTGCCCCCAGCAGGGAAAGTGCAGAACA .:.:..::..:x.x:.:.x.x.:..:....:...:.x.x..x.xxx:.x:....:.:...:........:...x::x..::.::..x...:x:.:.xxx....::.----.x.:x.:x:.........:...x:.:..x.xx.:.....xx.....................:x:x....:. 106M4I72M 111/178 62.4% 182/94230402 0.0% 4/178 2.2% 129105862 61108693 +3012 chr4 + 190214555 180955632 180955631 180955692 61 TTCTCTACAGCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCTTTTTTTT chr4 - 94230402 11997241 11997240 11997301 82233102 82233101 82233162 61 TTCTGTACTGCAGTTTCTTTTTTTTTTTTTTTTCCTTTCCATCTCTGCTGTTGTTTGTCTT ....x...x...x....................::...::x.:.:.:.x:..x...x.:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 168958391 21256164 +3093 chr4 + 190214555 180955645 180955644 180955718 74 TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTA chr4 - 94230402 52617692 52617691 52617765 41612638 41612637 41612711 74 TTTCTTGTTCTTTTGGGTTTTTTTTTATCCTTTACTATTCTTTCTTCAGTGTTTTTTAATCCTCTTGTACGCTA ......x..:....xxx.........x.::.....x.......:..:xx.x......xx.::.x..:...x... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 128337953 61876602 +7879 chr4 + 190214555 180975977 180975976 180976334 358 TCTTTTCTTTATTATTGTGATTAAATTCTGAATATTTATTTTCAATAAATCTTTATAGTTATAATGAATAATTAGTCTCTAA-AGAAAATAAGTATGTCTACATTTAAGATAAG--AACTTTAAGGTCATCAA-TATGTTCTTCAGCATTGATGAT--GACTGATTAATCGATTAGTCT-TACGTAAAGAAGATGTGAATTAAACATGGAGAA--------ATATATTCACTGAAACCAAATGGACCATTTTTCAAATGCTAGAACTGACTCTAATTATTTGCACTTATTTTGATTGCTGTATTGTATTTTATGATTTGCATTATC---TTATTACCATACGAC-CACTGTTACGGTGGGAAAAATTTATTTTATAT chr4 - 94230402 51847618 51847617 51847967 42382436 42382435 42382785 350 TCTTTTCTTTAATGTT---CATACATTTTGCATGCT-ATTTTAAATAGCTATTTTAAATCA---------------CTCAAGCAGAATATCAGTAAAAATACATAAAAGATTTGTTAGCTTCTTTTCCACTAGCTATATTTCACAGTAGTGGTGATTTGCCTGATTAAGAGATTAGTCTCTGAGAAGAGCATATTTGAAT--------GAGAATGAACTCCAAATGCTCAGTGGTACCAAGCAGATTATTTTCCACGCGATGGAGGTGGTTCTAATTATTTGTGCTTACTCTGATTGCTATATTGTATTTTAGTGTTTGGATTACCGTATTATTACCATAAAATGTGCTGCCATGGTGTCAAAAATAAATTCTGTAT ...........x.:..---xx..x...:..x..::.-.....x....:x.x...xx.:.:.---------------...x.:-....x..x....x:xx.....xx.....xx.--.:...:xxxx:..::.:-...:..::x...:.x..:....--.x........xx.........-.:x.x.:..x.x..x.....--------.....--------.x..::...x..:x.....:::..::.....:..x::.x.:..:x..::............::....:.:........:............xx:....x....:.---...........x:.:-::...::.:....xx......xx...:.:... 16M3D17M1D24M15D6M1I31M2I17M1I22M2I21M1I20M8D5M8I105M3I15M1I32M 230/331 69.5% 350/94230402 0.0% 46/331 13.9% 129128359 61086196 +3265 chr4 + 190214555 180994429 180994428 180994486 58 AAGAGGAAGAAATTGGATTTCTTTTGTTTTTCTTTTCTTTTTTTTTTTTTTTTCCAGA chr4 - 94230402 86453180 86453179 86453235 7777168 7777167 7777223 56 AAAAAAAAAAAATTGAACTTCTCTTATGTTTCTT--CTTCTTTTTTTTTTTTTCCAAA ..:.::..:......:.:....:..:.x......--...:................:. 34M2D22M 45/56 80.4% 56/94230402 0.0% 2/56 3.6% 94541249 NA +3042 chr4 + 190214555 181031359 181031358 181031430 72 CCATTACGTATATATATACTTATGTGTGTGTATACATGTGTATATATACGTGTGTGTGTATATACGTATATA chr4 - 94230402 50065487 50065486 50065558 44164845 44164844 44164916 72 CTATTCTATATTTGCTTTCTTTTATGTCTGAGTACATGCGTACAAACATTTGTGTGTATACATGCGTATATA .:...x::...x.::x.x...x.:...x..x:......:...:.x.:.:x.......:..:..:........ 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 130965872 59248683 +3533 chr4 + 190214555 181031752 181031751 181031836 85 CACCTACGTATATACACACACACACATATATATATATAGATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTT chr4 - 94230402 71630131 71630130 71630211 22600192 22600191 22600272 81 CACTTACGTGCATGCATATACACACACAAATATAC----ATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCT ...:.....::..:..:.:.......:.x.....:----....x.x...:..::.....x..::....x....:.:.:.x..::. 35M4D46M 57/81 70.4% 81/94230402 0.0% 4/81 4.9% 109401621 80812934 +3050 chr4 + 190214555 181031775 181031774 181031836 62 ACATATATATATATAGATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTT chr4 - 94230402 19704280 19704279 19704341 74526062 74526061 74526123 62 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTT .:.:.......::..x....x.....:...x::.............:x..x.xx:.:..... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 161327495 28887060 +3295 chr4 + 190214555 181031777 181031776 181031825 49 ATATATATATATAGATATATGTGTGTGTGTGTGTGTGTGTGTGTATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ...::.........x....x..................:.x::...... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 176625354 13589201 +3451 chr4 + 190214555 181031793 181031792 181031862 70 ATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATTTTTTTTCTTTTTTTTTTTTCTGAGACGGA chr4 - 94230402 42757855 42757854 42757924 51472479 51472478 51472548 70 ATATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTTGCAAAGATGGA ........:x..:.:.:.....x.:.:...:.....x..:......:....x.x.x...x.x:...:... 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 138273938 51940617 +9075 chr4 + 190214555 181064847 181064846 181065524 678 TTTTAAACAGAATTTATCACTTATACTCCTGTGAGGGAGCAAAGATGTGATGAGAT--------------------AAAAGAAATGAAGCTTCAAGTTATCCTTCTAATCCTCCTACCTGGGATTACTTTCAAAGAGTGTGTTTGCTCTTATCTCAGGGGAAATTCTCCTTCCTCTGGACTACAACATTCAGGTAAAG--TATTTTAGAAAACATGGTATACTGTTTGTGAAGATAGCAAA---------AATATCTATCTTTTGAGAGTCTCTTACAT--AGAATACTATA-TCA-AATATATTTATTCTTTTAGCTTATTTCTGGACCCTTACTCCTTTTCCAAAGACAAAGTGTCAATGGAGAACAAATAAATTTTTCTTCTGTATGCTCAAAAGATTGTCTGAGGTGGGCTTTTCATCACAGCTTTCAGATTCTAGTCTAAGCTTTAATTTTGTG----TGTGAATAAGTGATTACCAATACAAATGCAGTTCTGCCA-TAGAACGACCAACAGCTAATC----AGTTATTCCATTAAGCACATTTTTAAGCTTACTTTGCCTTGAAGTAAGAGTATTTTATAGAAAGAAACGAACACACAGGTTATCTGCAAACTATATATCTCAGACAAAAAC--CTATTTTTCCATGAAAGAAAGTGGTATCCAAAGGATTAAAATTATACATTAGT-TTACTAATCTTAAAAGGAGGAAGGTTTAAT chr4 - 94230402 51862859 51862858 51863486 42366917 42366916 42367544 628 TTTTCTACAGTACTTATCACTGCTTTTTCAGTGAGGGAGCCAAGATGTGATAAGATTTaaaaaaaaaaaaaaaatagaaaaaaaGGCAGTTTTAAGTTATCTTTTTAATCCTTGT-TCAGAGATTACTTTTAAAGAAGGTATTTTCTCCTATCTCAAGAGA-----------TGCTGCAGTGTAAC-TTCTGCTAAAATTTATTTTAGAAAACATG-----TTGTTTGTGGAGATTGTAAATACAAGGGTAATGCAGAAATTCAAAAAATGATTGATATGCAGAATAATACAGTCATAATGTA-------TTTTAGTCAAACTTTG-----------CTTTTTTGGAGAGAA-----------------------------------------AAAGCAGTATCTAAGCTTGGTTTTC--TGAGCATTTTCATATTTAAGCCTAGTCTTTCACCATTTGGTATTATGATTTAGCTA----------AAGTAATCTTTTGCCACTAGAAAGGTCATTTATTAGTCTCTTAAATATCTTGTTAGAAGGAGCATTAAGCTTATCCTATTTTTTAAATAATGCAT--------AAGAATTTCATACATAGTTTATCTACAGACTACATGTATTAACAAAAAATAGCCATTGTATAATGGGAAACGTTAGGATCCCAAGCATAAAAATTATGTATTGGTATTTTCAGTTTCAGACTGTAAAAGATTAGAT ....xx....x.:........xx.x:.:.x..........x..........:....--------------------:...:...x.x..:..:........:..:.......:x.-:.x.:.........:.....:x..:...x...:.......:.:..-----------:x...x.x.::...-...x.x....:--................-----:........:....x.:...---------...::xx.xx..:x:.:.:.xx:.x.:..--......x..:.-...-...:..-------......::x.x:.:..-----------.....::::...x..-----------------------------------------...:x.x.:...:..x.x..:...:--.x.xx::.....x...:x..:...:x....x.::x.x..----.:...x.x..:x.----------..:.:xxx..:.....-.....x.::..x:x::..:..----.:x...::::...::x:x.x:x.........:::.:::..xx.:xx.:x.:..--------.....x:xx.:...:..x......:..:....:..:.x.:.:xx.....:--.:...x.x:x...::.:.x:x.:.x....x...x..x........::...:..-..x::.:.:.:.:.xx.x::...:..x:.. 56M20I39M1D45M11D14M1D11M2I16M5D20M9I29M2I11M1I3M1I6M7D16M11D15M41D25M2D39M4I13M10D16M1I21M4I53M8D50M2I53M1I30M 381/581 65.6% 628/94230402 0.0% 144/581 24.8% 129201988 61012567 +3234 chr4 + 190214555 181066717 181066716 181066789 73 AGAGAGAGAGAGATAGAAAGAGAGAGAAAGGTTACTAAGAATAAAAGAAACTGTTTTTCAAAATGAATTGGAA chr4 - 94230402 47096783 47096782 47096855 47133548 47133547 47133620 73 AGGAAGGGAGGGAGAGAGAAAAAAAGCAAAGCTCTAAATTATAAAAAAAATAGTTTTTCAAAATCAGTTGAAA ..::..:...:..x...:.:.:.:..x..:.:.x:x..xx......:...:x............x.:...:.. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 133969934 56244621 +3184 chr4 + 190214555 181069675 181069674 181069759 85 CATGCAGTATATATAAGTGTATGTGTATATACATATATACATATATATACACATATATATATACACACACACACACATATACATG chr4 - 94230402 8395782 8395781 8395866 85834537 85834536 85834621 85 CAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATG ..x..x:.:.:.:..x....:::.:x.:..::..x..:.:..:...::x:....xx...:.:.............x.:.:.x... 85M 54/85 63.5% 85/94230402 0.0% 0/85 0.0% 172673893 17540662 +3611 chr4 + 190214555 181069679 181069678 181069757 79 CAGTATATATAAGTGTATGTGTATATACATATAT--ACATATATATACACATATATATATACACACACACACACATATACA chr4 - 94230402 8395782 8395781 8395862 85834541 85834540 85834621 81 CAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...xx:..:.:x..:.:....:...x....:...--......:...:.x:.:..xx...:...............x.:... 34M2I45M 58/79 73.4% 81/94230402 0.0% 2/79 2.5% 172673897 17540658 +3155 chr4 + 190214555 181069682 181069681 181069734 53 TATATATAAGTGTATGTGTATATACATATATACATATATATACACATATATAT chr4 - 94230402 32959576 32959575 32959628 61270775 61270774 61270827 53 TATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT ....:..:.....x......::.:.:..............:.x.:....x:.. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 148110106 42104449 +3028 chr4 + 190214555 181076792 181076791 181076851 60 TTTTATTCTTGCTTTGTTTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACAC chr4 - 94230402 51342049 51342048 51342108 42888295 42888294 42888354 60 TTTCATATGTACTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ...:..x:x.:....:xx.....x................x........xx..x..x... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 129734743 60479812 +3036 chr4 + 190214555 181082260 181082259 181082299 40 TGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 89821282 89821281 89821321 4409082 4409081 4409121 40 TGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA .........x.x.......................:..:. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 91260978 NA +3134 chr4 + 190214555 181082262 181082261 181082314 53 TGTGTGTGTGTGTGTGTGTATATATATATATATATATATGTATATATATATAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:........:....:.x:...x..:.:...::...:.:.:.. 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 110099633 80114922 +4198 chr4 + 190214555 181082357 181082356 181082447 91 ATATATATAGATATGTATAGA---TATAGATGTGTATATACATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.:.x..::.:.:...---....:....:.x..x.x:.:.:::.:.:.:....:.:.......:.:.............x.....x... 21M3I70M 65/91 71.4% 94/94230402 0.0% 3/91 3.3% 147683577 42530978 +3479 chr4 + 190214555 181082359 181082358 181082449 91 ATATATAGATATGTATAGATA---TAGATGTGTATATACATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGA chr4 - 94230402 33398780 33398779 33398873 60831530 60831529 60831623 94 ATATACACACATGCGCACAGACCATATAAATGTATTTAGAAGTGTGCGTGTGTGTATACACATATATACACAGAGAGAGAGAGACAGAGATAGA .....:.x.:...:::.x.x.---..x.x:.....x..x.x:.:.:::.:.:.:....:.:.......:.x.............x.....x... 21M3I70M 63/91 69.2% 94/94230402 0.0% 3/91 3.3% 147683579 42530976 +9849 chr4 + 190214555 181083541 181083540 181084041 501 TTTCAGAGCATTTGTTCCAAAGACCTGGCGTGCTTGGCTTAGATAT--TAAACACCCCATGTGTTGTATGTCTTAGTAT----CTGA-----AGATAACTTCCAATAAATTTAAAGTATA-------AAACAATCCGGTTTGGTATAAAAGTAATAACATCCTTTACTATGAAGCATGCA---------GGCTCTCTCTAAATACCTAT-GGTTCATGC---ACATTTTACCCACTATTTCAAAAACAGTCAATGAAAATCTGGCCAGATATCAGTATTTAATTTTCCCCATGCTAAGTTTCAGACTCCATGTTGAG-------TTCAGCTGCTGAGAACTGGAAACGAATATGAGATTTTTTTTATTGTCTTGTTTTGGAGAATGGAGACCACAGGATTCTATGACGTGAGCTTGTTGAACCCTCATCTCACTAAATGTGCAC-AGCTCTCCCTCATGACTAAAACGCACTGTCTGTTGTGAATGGCTTTGTTTTAGCCTCAG--TTTTAATAGAGCCAGAGGCAAATGTAACAGTATTTT chr4 - 94230402 51873996 51873995 51874514 42355889 42355888 42356407 519 TTTCATGGCATTTTTTGTAACG---TGG-GGGCATATCTCAGAAATCCTGAATTGCCTGTCTGCTATA-GCCCTGCTATACTCCTGACCATGAGATAAGTGTCCAAAGCAGTAAAGTGTATTAAAAAAAATAAT--AGAATGATGGAAAAGCAATTAC-----TTGCTTTCAAACCTGCATAATATCATGGCCAGTACAGAGCACCTCTTGGCTCCTGCGTCACTCTCCACTC-TTGTCTGGAAAACATTAAAAAGAAATCTAGATGAGCACCGATGTTTAATTTTCCCCATGCTAAGTTTCAGACTTC---TTCAGAAAGAGATGCAGCTGCTGAGCGTTAGAAGAGAATATTAGA--TTTTTGATTGTC-TGTGCTGAACAGCAGAGGTGCCAGGAATCCGTTTAGTGACCCTTTTGAACCCTCCTCACACTAAAGGTGTTCAAGCTCTCCCTCATGGCTGAAATGCACTTTTCACTATACTTAG----AGTTTATTTTCAGGTTTTTAATAGAACAAGTGCCAGACATGGGATTGCTTT .....x:......x..x:..x.---...-.x..x.:x..:...x..--.:..:xx..::.x..:.:..-.:.:.:x...----....-----......x.x:.x.x.:xxx......:..-------...:...--:.xx..:.:x.....:...x..-----..:..x.x..:.x....---------...:xx:x.x:.::....x.-..:..x...---..x:.::..:.-:.:.:.x:......x.x..x::......:.x:::::.:.::.:..............................:.---..x..-------.x...........x::.:...:x......x...--.....x......-...x:..:.x.:::...::xx.....x..::.xxx....x.:.x..........x..x.......x...:x.-..............:..:...:.....x.::::.:.:xx.:.----:x....x::....--..........:.x..x.x..:.::.::x.x.::... 22M3D3M1D17M2I20M1D10M4I4M5I28M7I7M2D22M5D17M9I20M1I9M3I11M1D75M3D5M7I33M2D12M1D72M1I42M4D13M2I36M 324/478 67.8% 519/94230402 0.0% 64/478 13.4% 129209545 61005010 +3154 chr4 + 190214555 181099334 181099333 181099425 92 AGAAAAATGGGAGGCTAAGTAAAAAGGAACATCAATGGAAAGAAAGAAAGAAAGAGAGAAGAAAAGAGAGAAAAAAGGTAGAATGAAATTGA chr4 - 94230402 51684938 51684937 51685028 42545375 42545374 42545465 91 AAAAATATGAGATAATAATTCTAAAA-AATATATATGGGAAAAAAAAAAAAAAGGAGGAAGGAGAAAGAGGGATAAGTGAGAGTGAGAGTGA .:...x...:..x:x...x.xx...:-..:..xx....:..:...:...:....:::....:.:.:....::.x...xx...:...:.x... 26M1D65M 60/91 65.9% 91/94230402 0.0% 1/91 1.1% 129414396 60800159 +25506 chr4 + 190214555 181100824 181100823 181101216 393 AAAGCACATTTGCTAAATTGAAATAATGGCCATTACCAGTGATTGTGAAACAATGAATCTTTGCCTAAAGCAGTGAGTGCAATAAGGCTTTTCATAACTTTTTGTATGCATAGTAAAGACTAAATTTGTTGCAGCATCCACAGAGATTTAAATTAATTTCAGAAAGAAAATTATTACATTAATTTGTTTTCATCAAATATAATTTAGAATTAGTTATTCAATAAGGGTTTTCCCAGTAGCCTTTAATAAAATGATAGAGATGGGCTTAGGGGGAGAGAATCTTAATTGTTCAGCATTCCATTTCTGTTTGAATCATTTTGGAACTTAGTTATTAGTATGAAGCAGCTTCAGTAAACTGGTGTTTGTAAACTAGTGTCTCTGACTCCCAGCCCT chr4 - 94230402 51881216 51881215 51881599 42348804 42348803 42349187 384 AAGGCAAGTCTGCTGGATGGGAATA---GCCATTACAGTCAACAATGAGGCAATGAATCTGTGCCTAAAGCAGTG----CACTAAGGCTTTTCATAACTTTCTGTATGCATAGTGAAGAGTAAATTTGCTGGAGCATCCACAGAGATTTAAATTAATTTCAGAAAGAAAATTATTACATTAATTTGTTTTCTACAAATATAATTTTGAATTAGTTATTCAGTATGGGTTTTCCCAGTTGCCTTTAATAAAATGATAGAGATGGGCTTACGGG--GAGAATCTTAATTGTTCAGTATTCCATTTCTGTTTGACTCATTTTCAAACTTGGTTATTAGTGTGAAATAGCTGAAGTAAATTAGTGTTTGTGAACTGTAGTGCCTGATTCTAGGCTTT ..:...x:.:....::..x.:....---........x:x::.:x:...::..........x..............----..x...................:............:....x........:..x...........................................................xx............x..............:..x.............x..............................x...--...................:.................x.......x:.....:.........:....::....xx......:.:........:....:xx..x:....:..:x:..::. 25M3D47M4D193M2D119M 328/384 85.4% 384/94230402 0.0% 9/384 2.3% 129219608 60994947 +33976 chr4 + 190214555 181121368 181121367 181122225 858 GTACAGCAGTCATTTGCAAGGTTCACATGTGGTTCTTGGAAAATCTAGGTCATCTCTCAATTTCGGGATGCTAAATTGCGTATAAAGCAGGTCAGCTGTCCT-GCACTGCTGATTTACAGCACCATGACAGCCTGCTAT--TTGCCTTTTAAGAGTTAAATTGTATCTGCTAATCCTAGCTTTTAAGCAGCTAAAACTGACATTGCTTAATTTACTTGTAACCCTTATAACAGACTTTTAGCAGAGGGTATTGGTCTTTGTACTGGATTGAAAACTGGAAGTCCCATAGGAAATTGACTAAAACTATTATCATAGTTAAGGTTGCCTATCATTCTAATTATAATTCACATCCAATAATGAACACCTTGTTCAATAATATTTAATTCAAATCATGATGCCGAGTATAAAATTACATATCGAGAGAATTCATTAGAAGTTTCAAAAGTAAGCTGAGTAAATGTGCCTCGGAGAATGTATTTGATGAATTTGTAAAAGTATTTAAATTAGATCTGTAAAGTATTATGAAAAATCCACAAGGGATGCACAATTAGGCGAATAAGCTCTTCAAGGCCAGGAGCTGCTGGGCATTCACTGCAAAATGCTTTCTGATATATTGTTTACGCAAAGCAGAGATATGGGAGGGGGAAGCCATAATA-TACAACAAAGCAGAAACGCAGCAGAGG--TGACGCCAAAAGTAATTGAATAAAAAATAAGTAATTCCCTCATAATTAGTTCTTTACCCTTTGCCTACATATTATTCA-TATGTCACCAAAGTATGTTTAATATGGGACAAATGGTTATTTAATTTATGCATGTTTTATAAAGTCCATAATGTATGAGCTTCATGAAAAGCTCATTCAT chr4 - 94230402 51885032 51885031 51885869 42344534 42344533 42345371 838 GTAGAGCAACCATTCTCAAAATTAATATGTGGTACCTAGAAAATCCAGGTCCCATTATAGCATTAGCATGTTATATTACATGTA--GTAAGTTAGCTACCTTTGTATTGCTGAT---CAGCACAAAG-CAGAAAGATATGTTTATCCTTTCAAGGAAAGACCTAATAGTTTTGTTCCAGTCTCTGTACTGTGGGGACTGATAAAGCCTAATTTCTGTCTCACATTTAAGGCAGA---TTATCAGATGGAA--GGTCTTTACGC-AGATAGGAAAT--AAAGCTCCCAAGAAAAGGGAATAAAACTGTTATCATAGAAAAGGTTAC-TATTGGTCTAATTATAATTCACATCCAATAATGAACACCTTGTTCAATAATGTTTAATTCAAATCATGATGCTGAATATAGAATTACATATCGAGAGAATTCATTAGAAGTTTTAAAAGTAAGCTGAATAAATGTGCCTCAGAGAATGTATTAGATGAATCTGTAAAAGTATTTAAATTAGATCTGTAAAGTATTATGAAAGATCCACAAGGGATGCACAATTAGACGAATAAGCTGTTCAAGTCCAGGAGCTATTGAACATTTATTGTACAGAGCTTCCTTGTATACTGTTTATGCAAAACAGACA-----GATGTGGAAAAAACAATACTACAATAAGTTTGGAA-GAAACTGAGGAATGAGGGCTTGAATAGTTAA--AAATAAAAGTCAATTCTGCCATAATTACTT-TTCCTTGTTTGCTTGCATGTTACTCCTTATACCACTGAAGTAT-TTAAATGTAGGGCAAACAGTTGTTTCATGTATGCGTGTTTTTT--ATTTCATATTTATTGACCTTTTGAGTTAACCCATTCAT ...x....::....:x...::..x.:.......x.:.:.......:.....x:x.:x:.::x.::.x...:..x...:.:.:..--.:.:..:....::.:.-.:.:.......---......x.x.-...xxx.x...--..::.:...x.::.xx.:.::xx..xxx:.x:.:.:..::.:.:x:.x.:x:::.....:.xx..:......x:x.x.x..x:...x::....---...x....x..x.--.......:::.-:...x.:...:--:...::..xx..:...xx..x.......:.........xx......:.-...::x.............................................:....................:..:....:................................:.............:............:...........x.......:........................................:.......................:..........x......x.........::..::....:.:..:.x.:x....:..x:....:......:.....:....x.-----..x.x....:xx.:....-.....:..:x:x.:..-.x.:.x....--...x.x.xx:.:..:..:.--...x..x.:x:.....:x:........x..-..:x::x.....:.:...:...:..x-...::...::......-..x...:.:..:....::...:...x..x.....:......x.--.x.:....x.xxx...x...:xx::xx.:.:....... 84M2D16M1I11M3D10M1D11M2I93M3D13M2D11M1D11M2D48M1D307M5D18M1I16M1D10M2I19M2D30M1D26M1I16M1D43M2D38M 611/831 73.5% 838/94230402 0.0% 34/831 4.1% 129236336 60978219 +3033 chr4 + 190214555 181127020 181127019 181127083 64 GAAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGAAGAGTAAGGGGGTGGGGGAAGAGA chr4 - 94230402 37794328 37794327 37794391 56436012 56436011 56436075 64 GAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAAAA ....::..:::.:::....:...:.x.:.x.:.....:...:.:x..:....x.......:.:. 64M 42/64 65.6% 64/94230402 0.0% 0/64 0.0% 143332692 46881863 +26778 chr4 + 190214555 181143437 181143436 181144133 697 AACTGCCACCAGGTGGCGCTCACGCAGTAACTTTGGAGCAGCAGCAAGCAGTGAATGTTAAAGACGCTGAATT-GGAAATATTACTGTCGAACAGATGTTCTTGTCTTTGATGCTGTATCTAAGTTAAGGTAGGAATGATGAGGTCAAAAAGGCTAATAAATTTATTATGTGGTGGAAAAGTTATTTCTCCTTGCCTATGAGACAGAAAAGCCATTATTTTTAAA-GCATAATGCTAGCTGAGCTTTGT--TCACTGTGACACAAAATTCTCCTAATCCTCCTCCTA------CTTTTATTATTCTTTGTGTGATATGTGTCTTTGGTTGTGAGTAAAGAA----GAAGAGATTATAGTAGTTGCTG---TAAGCTGACTGCTTAAGAGTTCAGTAAATTTAAATAAATCTGTTGCAGAGAAAAACA--------TGCCTTGCACTGATCATCCAACGGTGAATAAAAAATGTAGACAGAGCATTTATGCAAAGAGGCAAATGATGTGCGAGAATGGCACTGCCCGTAAACAAAGCAGACAGTTTGACAAAAGTGTTTTTCCCCCACTTTGATCAAATAGACTAC----AGCATCTTTGCATCCCACTTGTCAAAGTGCGGAATCTGTTTTCCATCTCT-----------------CTTTATTCCTACCTTCACCCAATCCCCACCATG-CTTTCATTCAGGTCTCCTCCCTGAAATGAAATAGGCTGTTAGTAGACTGCAGTT chr4 - 94230402 51896265 51896264 51896985 42333418 42333417 42334138 721 AATTTCCACAAGGTGGTGCTCAAGCAGTAAATTTCAATC-TCGTCATAATATGCATGTTAAGGGGCTTGAATTTGAAAACGCGGCTGTCAAACAGATGTTCTTGTCTTTAAAGCTCTATCTAAGTTAAGATGGGAATGATGAGGTCAGAAAGCATAGTAAATTTATTATGTGGTG---AAGTTATTTCTCTTTGCCCAAGAGACAGAAATACTATTATTTTTTACTGCATAATGCCATCT---CTTTGTGTCTGTTTTGACATGGAACTCTCATAATCCTTTCCGTAGCCGTATTTTTATTGCACTCTATATGCTGTCCACTTTTGGTTACGAGTAAAGGAACTTGCATGCATTATGATAGTGGCTGCTTTAAGCAGAATGCTGGAGAGTTCAATAAATTTAAATACATCTGTCACAGAGGAGTACACTGGACACTGTCT--CACTGATCATTCAACAGTAAATAAAAAATGTAGGCAGTACAATAATGCAAAGAGGCAGATGATGTGAGGGAATGGCAGTGACTATAAACAAAGCAGACACTTTGGTGTAAGTGTTTTT--CCCACTTTCATCAAATGGAGTACCCTGAGCTGTTTTG-------CTTGCCAAAGTGCTGTGTGTCTTTGTTGCTTTTTGTGTATATGCATGGTGTTTTTTGTTTGTTTTCA---AATCCACGGCAAACCCCTTATTCA--TCTCCTCCTTAAAATTCTATAGATCACTGATATTTTAAAGTT ..:.x....x......:.....x.......x...x:.x.-x.:x..x:xx:..x.......:.:xx:......-.:...:::x:.....:...................:.x...x.............:.:...............:....xx..:..................---............:.....:.x..........x:.:.........x.x-.........:.x..---......--::::.x.....:::..:....x.......:::.x..------:.......::x..:.:.:..x.:.x::::.......::........:.----.x.x:x.....::....x....---.....x..x....x:........:............x......::.....:.:x...--------..:..--..........:....:..:..............:...x:..x.x.............:........x.:........x..x.::...............x....:::x..........--........x.......:..x...----...xx:....-------....:........x.x:.x.x...x:::::.:.-----------------:...x.x::.:::....---.....x.:x..x:-.::.:.....--........:.:....xxx....:::::.::..xx:.:x.... 39M1D33M1I101M3D47M1I14M3D6M2I36M6I48M4I22M3I57M8I5M2D118M2D23M4I10M7D33M17I17M3D13M1I10M2D42M 503/674 74.6% 721/94230402 0.0% 70/674 10.4% 129247172 60967383 +3399 chr4 + 190214555 181149505 181149504 181149596 92 TTTTTAACCATCTAATCATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTAAAGACAGGATCTTTCTCTGTCACCTA chr4 - 94230402 4200258 4200257 4200344 90030059 90030058 90030145 87 TTTCTACCAGTAAAATTAGATATATATATATGTGTGTATATATATTTTTTCCTTTCAAATTTTTTTATTTCAG-----TTATCTGTCAACTA ...:..x.x:.xx...:.x............:.:.:..............::...:xxx......x.xxx...-----..x.......x... 73M5D14M 64/87 73.6% 87/94230402 0.0% 5/87 5.7% 176949247 13265308 +3206 chr4 + 190214555 181149509 181149508 181149568 60 TAACCATCTAATCATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735340 92735339 92735399 1495004 1495003 1495063 60 TAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT .....x::.:xx:..x.....:...:..:.:...............:.x.........:. 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 88414169 NA +3134 chr4 + 190214555 181149521 181149520 181149568 48 CATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735350 92735349 92735397 1495006 1495005 1495053 48 CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT .....x.....:...:..:.:........x......:.x......... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 88414171 NA +11976 chr4 + 190214555 181158887 181158886 181159116 230 AGCCAGTCATTATTTTATCATTTAATATTAATTATAATAGTATTAGTCATGATGAACTCCTGTTGCATTA-TGTGGCTTTCAAATGTATTCCCAAAGGACTTTGATTATAATTTGCCATTTTATTCATGTTCAATTATTTTAAAGTGTTGCTGAATTAACGAGATCCACTTAGCCTTAATCACTACTTACCTCATCAGTTTATAGCACTGAAATGTCTGGCTTATAAAGAC chr4 - 94230402 51903162 51903161 51903388 42327015 42327014 42327241 227 AGGTAGTCATTTTTTTATCATTTAGTATTAGCTATAATAATGTTAGTCATGATGAACTAATGTGGTATTAATATGGATTTCATATGTACTCTCTTAGGAATATAATTGTATTTTACCATTTTACTCATATTCAGTCTTTCTAAAATGTTGCTGAATTAGC-AGATCCACTTAGCCTTAATCACTACTCCCCTCAT---TTTGTATCAATGACAACTTGTGCTTCTGAAAAC ..x:.......x............:.....::.......:.:................xx...x.:....-.:...x.....x.....:..:.xx....x.x.:...:..x...:........:....:....:.:x..:....:.............:.-..........................:x......---...:..x..x...x.xx.:xx....x.:..:.. 70M1I89M1D34M3D33M 179/226 79.2% 227/94230402 0.0% 5/226 2.2% 129255725 60958830 +5021 chr4 + 190214555 181162312 181162311 181162619 308 ATACCTGCCTCACTTTCTATA-TCAGT-CAATCTCTGATGGGGACAATTTTTAAAGTCACGTATTAAAAGCACCCTTTACAAATT-GCATATGTGATAGAAACTTTTCAAGGTGCAATTATCTCATTAACAAATTACTCATTTAACAAGCTGACTCATCAAGATAATA-AGGAGGAAGACTCAATGCTGATTCTTTTTAGAGAAAGAAGCTCG--------------------------TATTATGTGAAAGA-TATTTTCATAATTTAAGTGAACCTTATAAACATATCCTTTGCAACTATAGTCATTTAGGTACTGGATATGATTTTGTATTTCTAA chr4 - 94230402 51906762 51906761 51907090 42323313 42323312 42323641 329 ACACCTGGCTCTTTTCCCATAATCAATATAATCTCTTAAGAGTTCAGTTTC-AAAATCAGCTGCAGAGAGTAACAATTAGTGGTTAGTAGTCTTGATAGA--TTTTATAAGAAGCAATTATGTCATTAACAAATTATAAAGTTATCAAGCTGTCTCATGGAGATAATATAGGAAAAAAA--AAAAGATGAT--TGTATAGAAAGTGAGACTTGTCTAGGAAAAAAATAAGGTACATGTCTGTTATGGGAAGAATTGTGTTATTAATTGAAGTGATCTCTATGGAGTTCACCTTTAGAGCT---GGGAGCCAGGTGCCATACCTAATAATGGATTTCAAA .:.....x...x:..:.:...-...:.-:.......x.x.:.xx..:...:-...:...xx.::x:.:..:.x.xx...xx::..-.:.xx:x.......--:...x:...:x........x..............:xx.x...x.......x.....x:........-....::..:.--x..x.x....--.x.x....:.:x..::..:.--------------------------.:.....x...::.-.:.x..xx.....x......x.::...::.xx.xx.....:x.:..---.xx.x::....:.::x.:x.:..xx..x.....x.. 21M1I5M1I23M1D33M1I14M2D66M1I10M2D10M2D20M26I14M1I46M3D36M 197/298 66.1% 329/94230402 0.0% 41/298 13.8% 129255550 60959005 +22939 chr4 + 190214555 181168422 181168421 181168768 347 TACGCTAAAAGGAATATACATGTATAGCAAAATTACATATATTTGTGACCTTACGACAATCAAGGCTGTTTAATCCTTATCAGTGACATCAGTGTGGACCCAATTAGCACAGTTTGCAGCCACTTCATAATTCAAAAGAATGTGATCATTCAGCTGGAAGCACATTTGACAGAAACTCCATAGTCATGAAGGGAAAAGCTTGCAAGATCACTCACTAGGATGGAGAAGCTGTCATTCTTTCATCAGTGCTGTTGAATACTAATGTCAAGGTCAGGATGGTGTAATTTTAGGCTGCCAAAATATTGCTGGAATTGATATACCAGAAGATGTTTAAGAA------AGTAAAGAAA chr4 - 94230402 51910208 51910207 51910553 42319850 42319849 42320195 346 TATGCTACAGCTAACATGCA-GTAAAATAAGTATTTATATAATTGGAA------AACTATTAAGTCTACTTAATCTTTATGAGTGACATCAATATGGACCCAATTAGCACAGTTTTCAGCCACTTCATAATTCAAAAGAATGTGATCATTAAGCTGGAAGCACATTTGACAGAAACTCCATAGTCATGAAGGTAAAAGCTTGCAAGATCACCCAGAAGGATGGAGAAGCTGTCATTCTTTCATCAGTGCTGTTGAATACTAATGTCAAGGTCAGAAGAGTGTAATTTTAGGCTGCCAAAATATTGTTGGATTTGATCTGCCAGCAGATGTTTAAGAGGGAAGTAGCAAAGGAA ..:....x.:xx..:..:..-...x.::..:xx.x:.....x...x:.------:..x..:...x..::......:....x..........:.:.....................x..................................x.........................................x..................:..xx..........................................................:.x:...........................:....x.....x.:....x............:------..:....:.. 20M1D27M6D283M6I10M 295/340 86.8% 346/94230402 0.0% 13/340 3.8% 129258214 60956341 +13731 chr4 + 190214555 181169708 181169707 181169956 249 TCTGATTGATTTTGCAA-ACATAAATATGTCAATGAGCTATGCCAAACAATAGCTCAGTAGGACTGTTTTCCATATTCCAGATACAT-TTTGAAAGATGTCTAAAATGACATGTTTGCAGTAAAATATACATGGCCGGGTGAACTTTCCTACTCTTATCTTGCGCCTCAGTAACTCTAAAGAGAAAGTGAAATCTTCTCTTCTG---CATCAGACATGTTTTAAAAA------TATTTAAATATTGCTTTCAAATATCCC chr4 - 94230402 51911689 51911688 51911947 42318456 42318455 42318714 259 TTTGATTGATTTTACATTACATGAATATGTCAATGAGCAGTGGCAAACAATACCTCAGTAGGATTGCTTTTCA-GTTCCAGATACATCTTTGAAAGATGTCGAAAATGACATGTTTGCAGTAAAATATACATGGCCGGGTGAACTTTTCTGGTCTTATCTTGCGCCTCAGTAATTCTTAAGCAGAAATCCAAGCCTTTGTTCTGATAAACTAGACATCTTTCTAAAATACATTTATTAAAATGAAATATTCAAAGATTCC .:...........:..x-....:...............x:..x.........x..........:..:...:..-:............-.............x.............................................:..:x.....................:...x...x::..:.xx..x.:.:.x.....---x.::......x...:x....------....x....:xx::x......x..:.. 17M1I55M1D13M1I116M3I20M6I27M 205/248 82.7% 259/94230402 0.0% 12/248 4.8% 129258019 60956536 +3339 chr4 + 190214555 181176732 181176731 181176795 64 TTCATGTAAATGCTTCAAAACTCATTTCTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 61029228 61029227 61029291 33201112 33201111 33201175 64 TCCTTGCAAATACTCCTTTACTTATTTCTTCTAGCTTACTTATTTCTTTTTTTTTTTTTTTTTT .:.x..:....:..:.xxx...:.......:.xx:..x...x...................... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 120147504 70067051 +3085 chr4 + 190214555 181176735 181176734 181176786 52 ATGTAAATGCTTCAAAACTCATTTCTTTTTTTTTTCTTTTTTCTTTTTTTTT chr4 - 94230402 92232553 92232552 92232604 1997799 1997798 1997850 52 ATGTTAGTTTTTCACAATTTATTTCTTTTTTTATTCTTTTTCCTTTCTTTCT ....x.:.x:....x..:.:............x........:....:...:. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 88944182 NA +12815 chr4 + 190214555 181178090 181178089 181178382 293 TTTTCAATAATTTATTCTCTCTCTAGGCTGCCTGAAATTCTAAATTGTTCAGATTACTGCTTGGGTGCATGGATGACCTAGTACCAGGGTACACCTGATGGCAATTGTTTATATATAGAACACAATCCTGATCAGTCTCTGACACTTACTACTGACTTCCTGCTGCTCAAAAATGTGTACTCTAATAGCATTTGTATGTTTTCTTTTCCCTCAAGGTTTCAGATTCCTTCTCTACAAGAACATGGAAAATTAGAATGAACATTACAGACACTATAATAGAAGCAGTCCAAGCA chr4 - 94230402 51913847 51913846 51914138 42316265 42316264 42316556 292 TTTTCAGTGGTTCGATCTCTCTGTTACCTTCTTGATAACATGAGGTGGTTGGACATGTGGATGA-TACACACATAACCTTTTGGCACAGAAGACCTGACTGTAGCTGTTGGTATACGGAGCAAAATCCTGATCAATCTCTGACACTTACTACAGACTTCCCACTGCTTAGAAATGTGTATTGTAATAGCATTTGTATGTTTTCTGTTCCCTTAAGATTTCAATATGCTGCTTCACAGGAGCAAAGAAAATTAGAAATAACATCACGGACACTGTAATAGAAATAAATAAAGTA ......:.::..::x.......x.x:x..x.:...x.x:x.:.:x..x.::..:xxx..xx..:-.:..::x..:....xx.:x..x:.x.x......:x.:.::....x:....::..:..x...........:.................x.......::.....:.:.........:.x......................x......:...:.....:xx.x..x..::...:..:..x:...........xx.....:..:......:........::.:x:x...:. 64M1D228M 205/292 70.2% 292/94230402 0.0% 1/292 0.3% 129264243 60950312 +30892 chr4 + 190214555 181189504 181189503 181190430 927 TGAAAGAAAAACAGGAAGAAAAAAGAGGAAAAGTGTGCAAATGATTACAGGAGAGCAAAGGAGGGGAGAGAAGTACA----AACTCCCCGTGGCTTGAAA------CCTGTTAGGGTGAGAAATTGTTATCTGTGGAAGGTTGAGTAGTTTGGAATC-TGCTATCCTAATACCAAGCCTTTTGTAGTTAGAATTTATCCACTGGTAAAT--GAGCT--ATTTCATTTAAAGTTGGTTTGCCCTACTTTAT-TAAACAGTGTTTTCCACGGACATTAAGTTATTGTCATAAAAGCCTTCGAGTGCCTCTCTTTTGGCGTTTCTAGCAGGACTGTTGTCTAAGTTTGGGGCCCGCGGGAGGCAAATTCAGCAGAGATGTCCAAATACAACTTTACGTACAGAGCATAGCTACCAAATTCCTCCTGGATTTGCCTATTGTTACAGAGAAAGACTTTGTAATTACCAAGGGATTATAGCAGAATATGAAAGGGCCTGAAAGCAGCTTTCTTGCAAATCAAGAATGTATTCAGCACAAACTTAGGAAGAGTCAGCT-GAGAAGTGAGGCAGAAGTGTCTGAAAATGTTAAGGGTTCAAGCAGAAGGGCCTGCCTGAAACTCCTAATTAAAGAAGTAAAAATGACTTTTTAAAGAATGTCAACGTCTGTCATTTGTATTCTTCACCAATAAAA--GGGTCTTCTGAGGATTGTAAATGAGGTGATGGCACTGCCCAAATACCCTGGGTTTGTCCTTCTTTT---ATACTCCCGAAGTAGTGAAAATGGAGCTTAATGGTACATAAATAAAAATAATTAAATAGAAGATAGTGGTACTGGTGCATTACCTGAATTAATATACAAGATTAAGAGGCCAATAACCCAAAAACAACTTTGTTATTTTGGTGTT-TTCTATAAATTAGATGACGCTCTCAGAGTAGAATGAAATATAGCTT chr4 - 94230402 51918987 51918986 51919894 42310509 42310508 42311416 908 taataaataaacaaataaataaataaataaaAAC-TATGAGTAATTACTG--------AGGAGCGTTGAAAAGCACAGTTAAAGTCCTAGGGGAGAAAAAAAAAAGTCAGTAAAGATGATTAATGGTTATCAGCCATAAAATAAGTGTTTTTAAGCCCTGTCAGCTTTG--------CTTTTCTAATGAGGACTTAACTGCTCCTAAAGTAAAGCTTCATCCCAGTTG----TGTTTTG---TATTTTATGTAATCAATGCTTCTTACAGACAC--GGTTACCATCATCATAACCTTTCAGTTCTTGTGTTTTGGCATCTCC--CAGGTTTTCTATGCAAGCTTGAGTCTAAAGGGAAATAAATTTAACTGAAATGTCCACGTGCAATTTAATGTGTGATGTAGAGCCATAGAACTTCTCTCAGACTTGCTTATTGTTGCAGAGAGAGCCTTTGTAATTACCAGGGGATTATGGCAGAATATGAAAGACCTTGAAAGTGGCTTTCTTGCAGATCAGGCGTGTGTTCTACACAAACTCTGAAACAATCAGCTAGAGTAGTGAAGCAGAAGTATATTAAAATTTGAAGAGTTCACTGAGAAGGTCCTGATAGACGCTCCTAATTAAAGAAATAAAAACCAACTTT-AAAGAATGTAAAAGATTCTC--------TTGTCAGTAAGGAAAAGGGGCCTTATGAGGACTGGAAATAAGATGATAACAC-----AAATACAGTGGATTCATTCTTGTTTTTCTCTACGACAGAAATAATGAAAATTGGGCTTAATGGTACATAAATAAAAATAATTAAATGGAAACTAGTTGTAGTGGTACATTACCTGAATTAATATACAAGATTAAAAGACCAATAACCCAGAAACAATTTAGTTACTTTTCTGTTCTTACGTAAATTAGTGAACAATTTTGAACAAGAACGTGGTGCAGTTT .:.x.:.x.....::x.:.x...x:.:x....::-.:::.:.:.....x.--------.....x.xx..:...:...----..x...:x.x..xxx:...------:.x..x.:.:...xx...x......x.:x:x.::x.:...:x...x:.::.-..::.x.:.x:--------.....x..:.x..:.:...x.::..xx....x--:....--..::..x..:----..x....---..:.....-...x..:..:..:::..:....:--:....:::....x.x.:....:x...x.:.x.x.......:.:..:--....x:.x:.:.x:...:...:.x.:x:x....:::.....:.:.x..:.......x:.:...:..x.:..::::x.:.x...:.:x:..:.:...:::..:....:.......:......:..x..............:........:..............:x.:......::...........:....:.x:...:...x:........:x.:..x.:......-...x.....:........:.x.x.....x.x...:.....xxx......x....x:x..x:...............:......:x.x:...-.........x..x.x:.x..--------.:x...x:..x:...--...:...x......:..x....:..:....::...-----......xx...:..::.:...x....---x...xx.x...:..:.......x.:................................:...:x....x...x....:............................:..:...........:......:..x....:...xx....-..x::........xx:..:x.:.:::.xx....:.x::.::..:.. 34M1D15M8D19M4I19M6I51M1I11M8D32M2I5M2I10M4D7M3D8M1I23M2D46M2D227M1I91M1D20M8D15M2I35M5D26M3I145M1I46M 622/885 70.3% 908/94230402 0.0% 65/885 7.3% 129270517 60944038 +7785 chr4 + 190214555 181206689 181206688 181206975 287 CTTTTTACCCATGCTTTGAGGCATTCAGACTCAGCTCTGAGTCACTGAAGCAAAATTGGAGCATCTGGGTAGAGTCTCAAAACAGCAGAGCTTACATCAATGAGACACCTCAGTGGCTTAGTGAAACCCAAACTACAAATGCTACATCAGTGGCTGTTGAGAAGCTATAGATTCTCTTCTATTAGGACCTAGACACAAGAACTCGTG-AAAACTAGTTGGAAACCCACAATGACTTAGTATATCATTTTCCCTGTGATCTTAACTGAGTTTCTAAATACACGTTGATG chr4 - 94230402 51925725 51925724 51926010 42304393 42304392 42304678 286 CCTTTGAACATTGCTTTAAGGCATTTTGGCTCTGCTCTGAGTCACTGAAGCAAAATTGGAGCATCTGGATGCAGTGTCAAAATAGCCCACGCAGCTTCAGTGCAGCACCCAAGTGAATAATCTCAACACGGAATACAAACACTGCATTAGTGATTGCCAGAAGGCTACAGTTCATCTTCCTCTGAAATACA-ACGCAAAAAAAAGTGCAAGAGAAGTTGAAGGATGATAG-GCTTTTTTTCTTTGTATTTTCTGTTATGTGAACAAAGAGTCAATCTATGTTTTGATG .:...x.x.xx......:.......:x.:...x...................................:.:x...x......:...xx.xx:x:.x...:..x::....:x....:x.x.x:xx...x.::.x......::..:...:....::..:::::.:....:..x.:x.....:x:.:::.:x:.-..:...:..xxx...-..:.xx.....:.::x:x.:.:-.x:..xx.x:x.::.x..::....x..x.x...x:..xx..x.xx..:::x...... 191M1D15M1I22M1D57M 178/285 62.5% 286/94230402 0.0% 3/285 1.1% 129280964 60933591 +3141 chr4 + 190214555 181221251 181221250 181221329 79 AACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAATATATGAACCAGACTGC chr4 - 94230402 8395807 8395806 8395885 85834518 85834517 85834596 79 AACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCCAAACTAC ....:::.:x:...:.:::.::.x:...:xx.:.................x.....x.::....x.x:.x...:...:. 79M 51/79 64.6% 79/94230402 0.0% 0/79 0.0% 172825444 17389111 +3070 chr4 + 190214555 181253683 181253682 181253744 62 ATTATATATGTATATATATGTGTGTGTATATATATATATATATGTATATATATAAATTGGAA chr4 - 94230402 43600820 43600819 43600881 50629522 50629521 50629583 62 ACCATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATATTAAAGCTAAAA .::..:.x...:...x..::..........:....x......x........xx..::.::.. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 137652863 52561692 +7122 chr4 + 190214555 181265439 181265438 181265720 282 GAATACAAGATAAATTTTTGCATTTCTTCAAAC-----TGTTGTATTTCCTACTTTTAGCCTGATGGTT-----------GGGTTAGATCTAGTTTTTAAAGTGGGGAGAAGAGTATGGCCGGGAGTTACAGCAGGTGCTTTAAGGAGATGGCAAACATTTCAGGATCAGT-GTGGTATTAGAAATAGCTCTGCAGTAGGAAAGCTGCAGAAGTCTTGCAATCTTGCTGTAATCAGAAGGCAGTGCGAGTGCTGAGATCATTTTATTACAGAAAGAATGAGATGTGGGAAGGAAGAGAA chr4 - 94230402 51942053 51942052 51942345 42288058 42288057 42288350 293 GAACACAAATTAATTATATACAGCACTTAATACCCATGTGTCATTTTTCCTCAGTTAAAACAGATTGTTTTTCTTACTTTGTGTGTGATCTAGTTTGAAA------GAAAAACCAAGGGAGGGGAATTACAGCAAGTATACTGCAGAGATGACAAATGCTACTGGATCAGTTATGGGCTTTGGTACAGCTCTGCTGTGGGGAACCTGCAGAGGTATCGCAATCTTCTTCTAATCAGAGGATAGGTCTTGTGCCGAGCACATGTTATCACTGAGTGAAAGAAGAAAGGACTGAAAAAGGA ...:....:x...x.x.x.:..x:x...x.x..-----...::.x......xxx..x.:x.x...x...-----------.x..xx..........xx..------..:..:xxx.x..xx....:........:..::x:.:x:......:....:::.x.x........-:...xx..x.:x.:........x..:..:..x.......:..x.:........x:.x........:.::..xx.xx....:...xx...x....:..x..:x...x..::x:x..:xx.:..:..:. 33M5I31M11I20M6D65M1I127M 181/276 65.6% 293/94230402 0.0% 23/276 8.3% 129323386 60891169 +17422 chr4 + 190214555 181269563 181269562 181271484 1922 AAAATTACATTATTGTTAGAATTTTTCTAATTGTTCATAGTGTGGGTTGGCCCAGTTTTTTGTGTGCTAAATCTTTTGGAAATTGTTCAGCTCCACTGAGGTAGAATCTATTTCTCTTTCTTCTTGAATCTAGCCCCCAGGGCCACTGTTATATGAACATTTTACCCTGCTAAATTAAGAAGCCCATCCTTGTTGTTTTGTATGCACCTTATTTAGGCCATCAGCAGACAAAATGGAAATTGTATTTTGTAACCCACAGTGTGGTCCACAGGGGAAATGAGCAGTTGATAAGTATATATCCAGTACACTTATTCTAAGTGATAA-TTAAAATCGGAGCAGAGAAACGCAGAAGGAGCCATGGAATGAAATTGTCAATCTAAAAATTGTCA---ATTTGAAAATCTCGCCTGATTTTTCTGCAATCAGCAGTTCAAGGAACCTTATCAA-GGACCCATCTCTGCCTTCCTAGGTTCAATTTGGAAGAGAATTAAAAAAGGAGAAAGAAAGTTTATATTGCATAAAGGCCTGCTGG---TGCTACGATAGTTAAGATGATATTGGTGTTTCCATTACATTCTGGGGTGAAATACTGCATAAAAGGTCAAAGACATGGGTGACTTGTTCCTTACATTAATTAATTAATTA-ATTGACTTATTTATTTTTTACTCAGATGGAAAATATTATTCTTCTCCTTTAAAGAAAACTTTGAATTG-TTTTGTATTTCAAATGTGTATTATTCAAATATAACCTAACACATTCCCTCCTGAAATTAGACTTTTATGTATGTATGCATAGAATCTTTTGTCTTTCCTGTTTCTATACCTTAGCATTCTACTTGAAGAAATGAAATTTTGTTATTGAACTAAGAAAATCAAGAGAATATATGTTGACCAATTTAATGCTATACATTTTTATTTC-CTGACTCGGGATTCAGTCTTAACTATTCTCAAACAAATGCTATACTATAGAAAATAATCTTTATTATACCATCCCCAAACCTTTTCTAAACCATGCATTTACTATCAAAAACTTCTAAAACAGTTAAAATCAAGAAATAATGTGGGTGCATAGCTCTGGGTTCAAACCCTGACTTACTCCTTACTGAGTGACCTTAGGCAGCTCATTTAACTTTGCTAAGCTTTAATTTCTTTATCTGTAAAATGGGAATAAAAGTGACTACTTCATCCTAGGCATTTCTGTG-------------AAAATTAAATGCATAAACAGAGGTTGGCACAGTGCTTGCCACCAAGTAACTGATCAGTAAATGGCTGGCTTTCTAACGGCTACATATGAGATTCTCAAAGAGCTACCAAATAAAGGTACACTCAAAACCAAAACTATAAAATGAGTCAAATGAAGATGTTGTAGATTGGTTTCTTTCCTATTCATACACGGGAGAAACTTTTTTTGATTTTATTGTCCTACTAGGTAAATAGTATACAAATTCTTTAGAAATTGCTTTCTGACATTTTCCCCCACTGTTATAGAGCATAAAGCATTAAAATTGG--ACATACCAGGATCAAAGTGG---ATAAACCATTCATTTGAAAGACCGCTCATTTATTATGGTAGACAATCCCCAAGTGCGCTCTATGGGAAGAAAGAGAGAGAGAAAAAGAAACTGCCCCCAGAGATGAAGTATTCAGGAAGAACAGAAGAATAGAAGGTAAAAATCTCAGCATTTACAGTTGCCTGGACAATCTAGCCCAGCAGCAGCA------TCCTCATATACAGGAAGCTTCAAAACTCCCAGCGTAAGTGCCTGTGGTGTCTGCTGCTGAGCCACATGCTGCTGCTTGAAAAATATCTTCCACCACATTAGAAAGCGGGGAGATGAAGCGGCAATTAAGACTAGCAGGACAGTTTTGTGCAACTGCACGACTGGATATTTTCAATATATACTCACCTCATAAACCAACAGAAAA--ATCTTATAATGA chr4 - 94230402 51944826 51944825 51946366 42284037 42284036 42285577 1541 AAGCTTAGAGTATTTTTGCAAACTCTGTG--TGTTGATGCTGTTTGTAAGCTTGGGTTCCT-TGCACTGAAACTTTTAGGAATTATTCAAACCCACCGAGGTAAAATCTTTTCTGTCTGTTCCTCTAATCCAACCCCTAGAGCCCCC-TTGTAATGACATTTTACC-TAATACATTG-TAAGCCCATCTTTGTTGTTTCAAGAGTGCTGTATTTAGGCTATCAACAACTAATATAGAAATTGTATTTTGTAGCCC-----------CACAGGG-AAATGGAGACTTGATAAATATCCACCTAGTGCACTT----CAGGCGCTAAATTAAAACAGAAGTAGAAACAC-----AGGAAACACAGAATGATATTGTCAGTCTGAAAATCCACACTGACTTAAAAATGCTAGTTGA--------------------CAAGAATCCTGATCAACAGACTCATCTTAGGCCTCTTGGGGCCAATTTGGAAATGGA---AAAGAGTAGAGAAGA----TATTTTAAAACAATGTCTGCTAGCAGTGCTGC--------ACATGGTGTTGGCATTTCTATTAAAAACTG-------ATACCTCCAGGGGGATCCAAAGTCTCAGT-----------TAGACCAA--GAGCGATGATATAGATATATTTAATATTTATT-------------------TTCTGTTT--------GTGTTCAGTTGATTTTATATTTCA-----GTATTTCCaaaaaaaaaaaaaaaaaaa--------aaaaaaaGACGATTG-----------------------GTCTGTTGTGTT------AGTTAGCA-----------GGATTACATGTGTGTTGCTAAAT---GAAAATTAAG-------------------TTAATTCTGTTTTAGTTTATTTAGCAGATAACTGATTCA--TTTAAT-------------ATCGTGGTTTGTAAAATGTGATTTTTTTTTCACCG--------------------CAAGCATTTG-------AGAACTCTAACAGATTTG-----------TTCTGCAAGTACATATATCTTTGCTGGCACTCTG--TTACAGTATATTGCAT--------------------ACTATGCTAAATTA---------------------GGCATCAAAAGTGGCTACTG-ATCTCTTGCACTTTTATTTTCTTCCATGTCTCAGCTTAAAAATATATAAAGGTGT-------ATATTT---ATGAAGTCAGTTTTTAGTAAGG---------------------AAATTATATTTTTTAAGAAATTACAAAAAAGG----------AAATAGAATAATGAAAGGAGAGTTAAGAAAAT-------------------------------CAGGATAA--TCCAATTGCCTTGATTATTTTACAACATTAAAAATATAA-------TTAGGAAGT--------ACACTAGTCTTCACTTCTAT----CATATTAACTCATATTTGGTAATATAACA----TAAAATATCCTATAACATATAAATATGAGA---------------ATAATAGACAA--CTTTATTTTTCTGTATATGTATAAATATACAAAGAAGAG--AACTTCTGTAAGA--------ATTCAGTGTCTAAAAGAGAAGAAAATGCTG---TTTGAGCAGTTAC---------GACAATCTAACGCAGCAGCAACAGCGGTATCCCAATATAAAGGAATCTCCAAAACTCACAGCATAACTGCCTGTGGAGTCTGTCATGGAACCACATGCTGTTACTTGAAAAATACCTTCTACATTGCTGAAAAGTGGTGAGATGAAGTAGCAATTAAGAATAGCAGGATAGTTTTGTTCACCTGCATGGTTGGGCATTTTCAAT-TTTTCTTCCTGTGTGAATGCACTGAAAATGATCATAAAATGA ..:x...x.x....x..:x..x:.:.x.:--....x..:x...xx..x:..:::.x..::.-..::..:..x.....:.:....:....:x:....:......:.....x..::x::.x:.:..:x....:.:....:..:...x.:-..:..xx:..........-.:x..x...:-x.........:.........::x:x.::.:x.........:....:..:x:..x..:................:...-----------.......-.....::x.x.......:...x:.:.:...:.....----:.:.:.x...-......:x.:..:...:.x..-----....:x..::......x.......:...:.....:xx..---.:..:.....x:::x:...--------------------....:.x...x.....-:...:.....:x.x.:..:.:..x:..........:x.:.---...:..x...:.::.----...x..:x.xx..x.:.....:.---....:.--------.x...:.:....::....:....x.xx...-------....:x.xx::::.:..x..:::x.x:..-----------..x.::..--:.x::..x.-..x..:x......x.x....:.-------------------....x:..--------::x..x.:...-....:.......-----.....x::x...x.x..xxx..x.x.x--------:...xx....xx..:-----------------------....x.:x....------xx......-----------.:.x.:x.xx.x....::.:..:---......:...-------------------.....x..:.x:xxx.......x-.x..:xxxx......--:....:-------------..xx.:xx:.:..:..x:.:..:...x..x:...:--------------------..x......:-------.:.x:.....x.x.x..:-----------.xx..:::..:....xx...xx.:.x:x..:...--....xx:x..:..x:.--------------------...x......::.x---------------------..x.x:.......:.....x-...::xx...:..:.:.x-------------x.:x.....x::...x.x..:x..-------:.::..---.:x....x.x.xx.:.....:x---------------------.x..x.x...:.:x....:x.xx....x..:.----------..x:.:..:x..:...x...xxxx.x...:..-------------------------------.:...x..--.::xx...x:..x...:.::...x.x:.x..x.:....x-------....:..x.--------...:.xx:.::....x:...----....xx:xx.:.x.x....--.:...x..----:...:.:x---....xx:..xx..x...:.---------------..::.......--.::x.x.x:x..x...:x.x.x...x.x.x.:....:.:--....x.:x:x...--------......x:xxx.x.::....x.:..x.:x:---.:.x....x....---------.........:.x........:..------...:x.....x.....x..:........x....:...x.........x.....::::x..:..........:.:...........:....:..xx:::.::....:..x.........::..........x........:........x..x.....:.::...::.........-.x.x..:x.:x::.:..:xx..x.....--...x..x..... 29M2D30M1D85M1D18M1D10M1D77M11D7M1D36M4D10M1I21M5D39M3I19M20D16M1I40M3D15M4D23M3I6M8D30M7D29M11D8M2D9M1I22M19D8M8D11M1I12M5D27M8D15M23D12M6D8M11D23M3D10M19D23M1I15M2D6M13D35M20D10M7D18M11D34M2D16M20D14M21D20M1D18M13I24M7D6M3D22M21D32M10D32M31D8M2D39M7D9M8D20M4D19M2I8M4D8M3I19M15D11M2D39M2D13M8D30M3D13M9D23M6I175M1D28M2I12M 997/1504 66.3% 1541/94230402 0.0% 455/1504 30.3% 129324737 60889818 +3160 chr4 + 190214555 181292624 181292623 181292675 52 CCTATTTTACCCAAACAAAAAACAAACAAGCAAAAATAAAACCAAAATAAAA chr4 - 94230402 71528700 71528699 71528751 22701652 22701651 22701703 52 CCTTTCTTACCTAAAAAACAAACAAACAAACAAAAAAAAAACCACAACAGAA ...x.:.....:...x..x..........:......x.......x..:.:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 109763924 80450631 +3004 chr4 + 190214555 181295751 181295750 181295804 54 ATATATGTGTGTGTGTATGTGTGTGTGTGTATATATGTATGTATGTATATATTA chr4 - 94230402 57691401 57691400 57691454 36538949 36538948 36539002 54 ATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTA ...:...:x..........:x..........:..x.:..:x...x.....x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 123604350 66610205 +3276 chr4 + 190214555 181295755 181295754 181295814 60 ATGTGTGTGTGTATGTGTGTGTGTGTATATATGTATGTATGTATATATTAGGGGTGAAAG chr4 - 94230402 43600823 43600822 43600882 50629521 50629520 50629580 60 ATGTTTGTGTATTTACATGTGTGTATACATATTTATATAGGTATATATTAAAGCTAAAAG ....x.....:.x.:::.......:..:....x...:..x..........::.x.:.... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 137694932 52519623 +3783 chr4 + 190214555 181295765 181295764 181295820 56 GTATGTGTGTGTGTGTATATATGTATGTATGTATATATTAGGGGTGAAAGGAACTT chr4 - 94230402 9151856 9151855 9151911 85078492 85078491 85078547 56 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATTAGGAGTGAAAAGTCCTT ..:...................:x..:.x.............:......:.xx... 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 172143909 18070646 +3008 chr4 + 190214555 181309388 181309387 181309476 89 AAGTTATGAAGATTTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 27426796 27426795 27426874 66803529 66803528 66803607 79 AAGAAATGTGGAATTTTGTGTCCTGTTCTCTCCT----------TACCTACTACCCCTCCTTTTTCTTCTTCTTTTTTTTTCTTTCTCT ...xx...x:..x....:.x.:..x..:.::.:.----------.x...x..x.:..........:..:..:.........:...:.:. 34M10D45M 56/79 70.9% 79/94230402 0.0% 10/79 12.7% 153882592 36331963 +4354 chr4 + 190214555 181309397 181309396 181309505 109 AGATTTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19559216 19559215 19559324 74671079 74671078 74671187 109 AAATCTTAATTCTGCTTTGTTGTAACTTATTTAACTTATTCCTTCTTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATAT .:..:..x...:.x:...x..x:xx...x:..xx...x:....:..:..x.x.....xx........xx:.x.......................:.:.:.:.:.:.:. 109M 75/109 68.8% 109/94230402 0.0% 0/109 0.0% 161750181 28464374 +3096 chr4 + 190214555 181309398 181309397 181309450 53 GATTTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTT chr4 - 94230402 200630 200629 200682 94029721 94029720 94029773 53 GGTTTGTTTTTCCTTTTTTTCCCTTCTTCTTTATTTCCCCCCCCCCCTCTTTT .:...x.x...:..........:.::......x:....:..:..:....:... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 181108768 9105787 +3191 chr4 + 190214555 181309401 181309400 181309491 91 TTTTATTTTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGT chr4 - 94230402 35465501 35465500 35465583 58764820 58764819 58764902 83 TTTTTTTTTCCCCCTTACATTCTTTTCTTTCATGCTTGT--------TTGCAGTTCTTTGATTTGTTTTTTTTTTGTGTGTGTGTGTGTGT ....x.....::::..x.x......::....x.x..:x.--------..x:xx..:...xx...x..........x............... 39M8D44M 61/83 73.5% 83/94230402 0.0% 8/83 9.6% 145843900 44370655 +3684 chr4 + 190214555 181309404 181309403 181309495 92 TATTTTCTTTTTTTCCTT-CTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGT chr4 - 94230402 35465499 35465498 35465583 58764820 58764819 58764904 85 TATTTTTTTTTCCCCCTTACATTCTTTTCTT--------TCATGCTTGTTTGCAGTTCTTTGATTTGTTTTTTTTTTGTGTGTGTGTGTGTGT ......:....:::....-.x..........--------..x.x...x...x:xx..:...xx...x........x................. 18M1I12M8D54M 67/84 79.8% 85/94230402 0.0% 9/84 10.7% 145843905 44370650 +3047 chr4 + 190214555 181309405 181309404 181309475 71 ATTTTCTTTTTTTCC-------TTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 24861591 24861590 24861668 69368735 69368734 69368812 78 ATTTTCTTTATCCCTATGTCATTTCTTTCTTCCCTCCACCATTCTCCCCCTTTCCTCTCTTTTCTCTTTTTCTTCATT .........x.::.:-------.........::..:.x:.x.:....:.....::.:.:....:.:.....:..:x.. 15M7I56M 50/71 70.4% 78/94230402 0.0% 7/71 9.9% 156447814 33766741 +3067 chr4 + 190214555 181309408 181309407 181309489 82 TTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGT chr4 - 94230402 20946466 20946465 20946547 73283856 73283855 73283937 82 TTCTCTTTACAGTTCTATTTCCTCATTCTCCTCATCATCTCCAATGTTTAGCTTATCTTCTTTTTTTTGCGTGTGTGTGTGT ....:...x:xx....x.:.::..x.:......x..x..:::xx.x...xx:..x.:..:........x:............ 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 160362942 29851613 +3130 chr4 + 190214555 181309408 181309407 181309477 70 TTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193303 40193302 40193372 54037031 54037030 54037100 70 TTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ..x...:x.:::....:...:.x::.::.x......xx....:x:................:.....::. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 141116105 49098450 +3305 chr4 + 190214555 181309408 181309407 181309467 60 TTCTTTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 32546808 32546807 32546867 61683536 61683535 61683595 60 TCCGTCCCTTCCTTCTTTATTTTCTTTCTTTTCCGCATCCTTTTTATTTTCTTCCTTTTT .:.x.:::..........x.......:..::...x.x........x....:..::..... 60M 45/60 75.0% 60/94230402 0.0% 0/60 0.0% 148762600 41451955 +3400 chr4 + 190214555 181309412 181309411 181309471 60 TTTTTTCCTTCTTTCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193313 40193312 40193372 54037031 54037030 54037090 60 TTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ....:..::...x......x:.....xx...:.x.:...............:.....::. 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 141116099 49098456 +3035 chr4 + 190214555 181309425 181309424 181309491 67 TCTTTTCTTCCTCCTCCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGT chr4 - 94230402 56475207 56475206 56475273 37755130 37755129 37755196 67 TCTTCATTTTTTCCTACTCTGTTCTCATTCCTCTGCTTTTTTTTTCATTTTGTGTGTGTGTGTGTGT ....:x:..::....x...:x:::.:x..::.:.x:.........:x....x............... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 124834218 65380337 +3117 chr4 + 190214555 181309442 181309441 181309512 71 TCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGATGG chr4 - 94230402 28563566 28563565 28563636 65666767 65666766 65666837 71 TTCCCCCCTCTAAACTTTTTTTTTCCTCCTTTTCTTGTGTTTGTTTTTGTGTGTGTGCATGGGTGGGGGGG .:.:..::.:.xxx:.........::.::....:......x...x.x..........::..x...:.:x.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 152745876 37468679 +3022 chr4 + 190214555 181309445 181309444 181309492 48 TCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 - 94230402 16400260 16400259 16400307 77830096 77830095 77830143 48 TTCTAATTTAATTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTG .:..xx...xx........::..........x................ 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 164909185 25305370 +3134 chr4 + 190214555 181309448 181309447 181309546 99 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTG------------------------TGTGTGTGTGAGATGGTGGGATGG---GGTTTCATTCTGCCACTTAGGGTAGA chr4 - 94230402 16400259 16400258 16400384 77830019 77830018 77830144 126 TTTCTAATTTAATTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTGATATACTTCTACCTACCTTCAACCAGTAAATATGATAAATAGAAATAAACTGGTTTCATCCTGCTTCTTAGGAAAGA ...:.xx...xx........::........x..................------------------------x..:x:.:...x.x:xx.::..::---........:....:x......:x... 49M24I24M3I26M 72/99 72.7% 126/94230402 0.0% 27/99 27.3% 164909189 25305366 +3179 chr4 + 190214555 181309448 181309447 181309496 49 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 38302493 38302492 38302541 55927862 55927861 55927910 49 TTTTTGGTCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTG .....xx.:..........x.x........x.x................ 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 143006955 47207600 +3258 chr4 + 190214555 181309448 181309447 181309506 59 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG-----------------------TGTGTGTGTGTG chr4 - 94230402 38302495 38302494 38302576 55927827 55927826 55927908 82 TTTGGTCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTGAGATTTTTTTGTGGTTTtttttttgtgtgtgtgtg ...xx.:..........x.x..........x................-----------------------............ 47M23I12M 53/59 89.8% 82/94230402 0.0% 23/59 39.0% 143006953 47207602 +3608 chr4 + 190214555 181309449 181309448 181309513 65 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTG-----------------------TGTGTGTGTGTGTGTGAGATGGT chr4 - 94230402 38302500 38302499 38302587 55927816 55927815 55927903 88 TCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTGAGATTTTTTTGTGGTTTtttttttgtgtgtgtgtgtgtttgattgt .:..........x.x............x..............-----------------------...............xx...x.. 42M23I23M 58/65 89.2% 88/94230402 0.0% 23/65 35.4% 143006949 47207606 +3069 chr4 + 190214555 181309450 181309449 181309492 43 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG chr4 - 94230402 54543443 54543442 54543485 39686918 39686917 39686960 43 TTTTCTCATTCTATTTTTTTTCTTTTTTGTGTGTGTGTGTGTG ....:.:x..:.x........:..................... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 126766007 63448548 +3609 chr4 + 190214555 181309451 181309450 181309506 56 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTG-----------------------TGTGTGTGTGTGTG chr4 - 94230402 38302500 38302499 38302578 55927825 55927824 55927903 79 TCTTTTTTTTTTGTGTTTTTTTTTTTTGTGTGTGTGTGTGTGAGATTTTTTTGTGGTTTtttttttgtgtgtgtgtgtg .:..........x.x...........................-----------------------.............. 42M23I14M 53/56 94.6% 79/94230402 0.0% 23/56 41.1% 143006951 47207604 +3231 chr4 + 190214555 181309453 181309452 181309494 42 TTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG chr4 - 94230402 16400266 16400265 16400307 77830096 77830095 77830137 42 TTTAATTTTTTTTCCTTTTTTTTTTGTGTGTGTGTGTGTGTG ...xx........::........................... 42M 38/42 90.5% 42/94230402 0.0% 0/42 0.0% 164909187 25305368 +3310 chr4 + 190214555 181309456 181309455 181309498 43 TTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804591 23804590 23804633 70425770 70425769 70425812 43 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG ..........:.........x......:.........::.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 157504865 32709690 +3204 chr4 + 190214555 181309458 181309457 181309494 37 TTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTG chr4 - 94230402 54511330 54511329 54511366 39719037 39719036 39719073 37 TTTTTTCTTTTTTTTTTTTTGTGTGTGCGTGTGTGTG ......:....................:......... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 126798128 63416427 +3524 chr4 + 190214555 181309458 181309457 181309500 43 TTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804591 23804590 23804633 70425770 70425769 70425812 43 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG ..........:................:.........::.... 43M 39/43 90.7% 43/94230402 0.0% 0/43 0.0% 157504867 32709688 +3319 chr4 + 190214555 181309460 181309459 181309502 43 TTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 23804591 23804590 23804633 70425770 70425769 70425812 43 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTG ..........:.......x........:.........::.... 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 157504869 32709686 +3143 chr4 + 190214555 181309462 181309461 181309507 46 TTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA chr4 - 94230402 23804591 23804590 23804636 70425767 70425766 70425812 46 TTTTTTTTTTCTTTTTTTTTGTGTGTGCGTGTGTGTGCATGTGCAA ..........:.....x.x........:.........::....::. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 157504871 32709684 +10316 chr4 + 190214555 181310803 181310802 181311060 258 ATTTTTTTGACTTTTTCCTACTGGTATTTTTTTACTTAAATTTGAAATTTACGAATCTCTTGGTCCCCACAGAATTCGTTAACTCTATATCTAGAGTAAAATAGAGCCAATTTAGCAGTAGCAGTGTTTG-GTGATTCTCATTTTGGGCACAAATGTCTAATCAACACCTGCAGTCTGGGTATACATTGGTTAGTTTACTCTGCATGCTG-CTGAGGAGGGTAACCTAACGATGCTTCTGATAGACTAAACATTTGCAAA chr4 - 94230402 51964256 51964255 51964507 42265896 42265895 42266147 252 ATTTCTTTGGTTTT---CAGCCTGCATTTTTTGA-TGGATCTTAGATTTTGTGTACATCTCTTTCCCCCTGGAATTCATTAACTCTAGCTCTAGAGTATAAAGGTGACAATTTAGATGTAGTAGTGTTTGCGTTACTCTTATTTTGAAGTGAGATGTCCAATCAACACCTACAGACTTTGTGGGTA----TTAGTTTACTCTGCATGCTGTCTCAGAAGTGTAGCCTAATGATGTTTTTGACAGAATAAACATTTACAAA ....:....::...---.x:.:x.:.......x.-.x:.x:..::.x...::.x.:x...:xx.....x::......:.........xx.........x..x:.x.x........xx....:........-..x.:...:......::xxx.:.....:...........:...x..xx..:x::.----....................-..x..:..x...:.....:....:..:...:...x.........:.... 14M3D17M1D95M1I55M4D20M1I49M 184/250 73.6% 252/94230402 0.0% 10/250 4.0% 129346547 60868008 +3013 chr4 + 190214555 181318264 181318263 181318343 80 TTCTCCAATGAAACCAAACAAATAGGATATATATATATACACACACACACACATACATATATATACATATACATATATAT chr4 - 94230402 87372714 87372713 87372793 6857610 6857609 6857689 80 TTCACAGACTAGATAAGAGAAAAAAATTATTTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT ...x.x:.:x.:.:x.:.x...x.::x...x.x:.x.:.........x.....:....x....:::..:...:....... 80M 53/80 66.2% 80/94230402 0.0% 0/80 0.0% 93945550 NA +3632 chr4 + 190214555 181318289 181318288 181318407 119 GATATATATATATACACACACACACACATACATATATATACATATACATATATATATTAT--------ATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACA chr4 - 94230402 14964764 14964763 14964883 79265520 79265519 79265639 120 GAAATGCATTTGTACACTCAAAAAGGCAAA-------GTGCATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACA ..x..::..x.:.....x..x.x.x:..x.-------:.:...x..:...x.x:.:..:.--------......x.x:.....:::::..:...:......:.xx........::............ 30M7D23M8I59M 77/112 68.8% 120/94230402 0.0% 15/112 13.4% 166353525 23861030 +3366 chr4 + 190214555 181318290 181318289 181318406 117 ATATATATATATACACACACACACACA-TACATATATATACATAT-------ACATATATATATTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964767 14964766 14964884 79265519 79265518 79265636 118 ATGCATTTGTACACTCAAAAAGGCAAAGTGCATTTATATAGAGGTGTTGTGGACACAAATATGTT-------TGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..::..x.:..:..x..x.x.x:..x.-.:...x......x.x:.-------...:.x....:..-------..:x....:::::......:......:.xx:.......::............. 27M1I17M7I13M7D53M 77/110 70.0% 118/94230402 0.0% 15/110 13.6% 166353523 23861032 +3562 chr4 + 190214555 181318319 181318318 181318403 85 CATATATATACATATACATATATATATTATATATGTGTCTGTGTGTGTGTGTATATATATATATATACACACACACACACACACA chr4 - 94230402 70982596 70982595 70982680 23247723 23247722 23247807 85 CATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ..........:x...x...:..xx.x..x.x:x.....x.....:........:....:.x:...x.::::::::..:....... 85M 58/85 68.2% 85/94230402 0.0% 0/85 0.0% 110335723 79878832 +3099 chr4 + 190214555 181318347 181318346 181318387 41 ATATATGTGTCTGTGTGTGTGTGTATATATATATATATACA chr4 - 94230402 89821281 89821280 89821321 4409082 4409081 4409122 41 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACA ..:.:.......x.........:.............:.... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 91497066 NA +3264 chr4 + 190214555 181318349 181318348 181318415 67 ATATGTGTCTGTGTG--------TGTGTGTATATATATATATATACACACACACACACACACACACATATACACA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.....x......--------...:.x..:....:...::x....:xx.:...............:.x..... 15M8I52M 52/67 77.6% 75/94230402 0.0% 8/67 11.9% 172922561 17291994 +3438 chr4 + 190214555 181318357 181318356 181318457 101 CTGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACACACACGGCCAGGGGGAGACACAGAGAGATAGAGA chr4 - 94230402 8395786 8395785 8395874 85834529 85834528 85834617 89 CCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACAC------------AGACACAAATGAATAAAAA .::.......:...:.::...x.:..:..:x:...:.:::.::.x:...:xx..................------------.......:.x::...:.:. 70M12D19M 60/89 67.4% 89/94230402 0.0% 12/89 13.5% 172922571 17291984 +3507 chr4 + 190214555 181318358 181318357 181318428 71 TGTGTGTGTGTGTATATATATATATATACACACACACACACACACACACATATACACACACACACACACAC chr4 - 94230402 8395789 8395788 8395859 85834544 85834543 85834614 71 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGAC .......:.....::...x.:..:...x:...:.:::.::.x:...:xx...:...............x.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 172922569 17291986 +3376 chr4 + 190214555 181318918 181318917 181318990 73 ACAAGAGCAAAGCTCAATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGGGAAGAGAGAGAAA chr4 - 94230402 91615572 91615571 91615644 2614759 2614758 2614831 73 ACTAGAGTGAATGGCAAGCTTAGAGAGAGAAAAACAAAGCAAAAAAAAAACACAAACGGGGACGGGAGACAAA ..x....::..xxx...x..:.:.:.:.:.....x...:x..........x.x.........x.:....x... 73M 53/73 72.6% 73/94230402 0.0% 0/73 0.0% 89703346 NA +10223 chr4 + 190214555 181320512 181320511 181320859 348 TAGCACAATTTTCTCTATTTCTACTCTATTTTTCTTTACAATTGAACGAGTAAGTTTAAAAGCACATGCCAGAATTGCCCCCAAAATATGTTGTAATTCCATTTCAATGTGACAGTGTATTTCAGAAGAAACAGTTTCTCAGGTGATCTGGGATAGGTTACAATGTTAATCTCACAGCTGTCTCTGTAACTCTCAGTACTCATAA----ATCATGTGGTCTGTAATAAGAGAAGTAAGTTTGAGAGGTTAGAAATCTTAAGAAAATTGTGACGGGGTGATAGATGATATGAAATGACTACATTCTAAAGATGTTATATAAAGGGGAATGTGTTGCATTTGAGATAAGTGCCT chr4 - 94230402 51967703 51967702 51968002 42262401 42262400 42262700 300 TAGAGCTGTTTCATCTGT-----CCTTATTTGTCTTAGTGATTGAGCAAGCAAATTTAAAAGTAAAT------------TTCAAAGTAGATTGTGATTCCATTTCAGTGCGACAGTGTGTTTCATTTGAAACTG------AGGTGCTGTAGGATAGGTGATGTTGCTAATCTCACTGCTGCTGCTCTTGCTATTGGTACTCAGAATTCTTTCATACTGTCTGTAGTACATAGAACAGCTTGGGGAGGTTAGAAATCCAGAGAAAACTGCTAGAGG-----------------------------TGGAGATTTTGTATGAAAGGGAATGTATCGCATTTTAAATATATGCCT ...x:.x:...:x...:.-----.::.....x....x:::.....:.:..:..:........:.x..------------::....:..x:....:...........:..:........:.....xxx.....x.------.....x.x.:........x.::x..:.........x....::x..x.x:..x.::.......x..----x....::x.......:..x:x::.::.:x..x.:.............:x:......:..:x.x:..-----------------------------.::....x..:...:..:........:.:......x.:...x:..... 18M5D44M12D55M6D65M4I66M29D48M 208/296 70.3% 300/94230402 0.0% 56/296 18.9% 129352809 60861746 +72524 chr4 + 190214555 181350630 181350629 181352108 1479 GTTGTGAACAC--ACAAGGATAAGGGGGGAAAAGGAAAAGTACAGTGTGGCGCCTAAAAAATGCAAACACAATTTAAAC------TTCTTTAATTTGTGTGGGGGGGATAGATAAATAATGATTTGCAGCGACCAGGGATCTCAGATGGCTTTGTTCATATTTTACTAGTATACTCCTCTTTGCAGCCTGAGTAATTAAGTCTTATGACATTCCAGAAACCATAAATCCTGCTGAGATGTTTAAGTCTGGAACAACCT-CTTGATGTACAATCAAAATAATAAAAATAAAAAAGGACACTT-CTCTGGTTCTTAACAAGCTGTTTTGCTGTTACTTCTGAAACACAATTGCATG-----------TGGCCCACTCAAACTGTT-TCGTCTCATTGTTAACTAGAAATTCCTTTTGAAATTCATTGCCTTCAATTACATTTTCTAAAAGAATTTTAATTGCATGGCTCTAAAGAATAAAGATGCTCTAGGCTCCATTTGTTTATCATGGAGGGGCCTAAAAAA--TGAGGACAGAGCTTCCCAGCTCATGCAGGGGTTGCAGAGAGAGGGAGATGACTTTTAATTCGACAAGTTCAGAGAGATTTCTTAGTTTGACGCGCTCAGCAGGGGGTCTTTGAGCGCCTGGCAATGCTTCAGCATTCTGAGCTTTGAAAGTCTTTCCCTGCAGCAGAAATTGTATCAAAAGCCAATGATAATATTCCCTGCAAGGTAAAGCACCCTATTGAAGATTTCGAGAGCTGTTTATTTATTCATCACAG-TTTTCCTTTTAGGACGTATCAGGCATCTAGGTAATAATTCACATAGATGATAG-AAAATGCAATAAAT--------------------CCTCCTCATTAATCTTTCACCTTTTCCTTCTTCTACTTCTCTGTAGGCCACGTGTAGATATAAAATGGTCTTTCTGCTTGTCCCAAACATGTAT----------ATCTTTATACTGAATCTCAGTTTCTTCCCCTCTTTTTCCATTTTTAAACAAAATTGTCATTTCAGTCTACCTTCTACCACCAGCTGAGCATATAAGATGTTTAAGGCCATTTCCTCCTGCTAAATCCTCCAAGTGATTAATTAATTTTACAGGAGTATGTTCAGTGTCTAAGGTGTTTTTTGTATCTTGGTATTTTAAGTATGTTTCAGAAAGCTGTTTTCAAAGCAAATGTTAACAATCGTGTTGATCTCTTGAAGGATATACATATTTTAATATTTT-GTATTATATTTTGTACACATGGTAGGACAAATACATTTCACTCTCTTT------CACTGTTTCTAGGGCAGATCTGGGAGTAAGGGGCCATGACGACCTTTCCCTCTTGTGTCGTCAATGTCTGCTATCAGTTTGGCAGAA---------TCAGTGAAGACA--AAAACCGTTTTCCCTTGTTTTGTTTTGTTTTTTTTTTTTTTCTTTCATCTTCT-ATGGCATTAAAAGTGACCTTGCCTTGCAAATATCGGTGTGGTACCACAAGGG--AAGCAGTTGCCATAGAGGAGAAAGTTTTCTTTC chr4 - 94230402 51980260 51980259 51981750 42248653 42248652 42250143 1491 GTTGTGAATATTTACAATGGTTTGGGTAGATAAAGGGGACT---------TGCCAAGAAAATACACATCC--TTCAAAAAATATATTCTTTAATTTCTT---AGGAGATATATAAATAATGATTTTAAGAAAGCAAGGATGCTTTCTG-CTTTGTTCATATTTTAATAGTATACTCCTCTTTGCTGTTTCAGTAATTAAGTCTTATGACATTCCAGAAAGCATAAATCCTGCTGAGATGTTTAAGTTTGGAGCAACCTTCTTGATGTACAAACAAATTAA-ATAAATAAAA---GACACTTACCCAGGATCTTAACAAGCTGTTTTGCTCATACCTTTGAAACGCAATTGAACGGTAAAGCGATATGGTCTATTCAAACTGTTCTAGCCTCGTTGTTCACTAGAACCTTCTTTTGAAATTCATTGCCTTCAATTACATTTTTTTAAAGAATTTTAATTATGTGCCTGAAAAGAATAAAGATGCTCGAGGCTCCATTTGTTTATCGTGGAAGG-CCTAAAAAAAATGAGGACAGAGCTTCCCAGCTCATGCAGGGGTTGCAGAGAGAGAGAGATGACTTTTAATTCGACAAGTTCAGAGAGATTTCTTAGTTTGACGCGCACAGCAGGGGGTCTTTGAGCGCCTGGCAATACTTCAGCATTCTGAGCTTTGAAAGTCTTTCCCTGCAGCAGAAATTGTATCAAAAGCCAATGATAATATTCCCTGCAAGGTAAAGGACCCTATTGAAGATTTCTAGAGCTGTTTATTTATTCATCACAGTTTTTTCTTTTAGGACGTACCAGACGTATAGGTAATAATTCACACGGATGCTAGAAaaatataataaataaataaataaataaataGGAATCCCTCATTAATCCTTCAACTTTCCCTTC----AGTTTTCCACAGGCCACGTGCATCTATAAAAT----TTCCTATCATTCCCTGCCACGTACTCTGCTTAAAATCTTCACTTCAGATCTCAGTTTTTCCCCCTTTTT-----------AACGGAATTGTCATTTCAGTCTGTTTTCTACCACCAACTGAGTACATAAGATGTTTATGGCCATTTCCTTCCGCTAAACCCTCAAAATGATTGATTAATTTTACAGAAGGATATTCAATTTCTTAGGGGTCTTTTTAAATCTTATTTTTAAAGTAGATTTGCGATAAAGTGTTTCAAAGCCAAGATTAA-AGCCTTATTTATATTCCAGAGATCAGA---GTTTTAACGTTTTGGCATTAC-TTTTATTTGAAAAGTATG-CACATATGTTTTTCTGTTTTTGTTTTGTTTTGTTGCTGCAGCAGAGCTGGGAATGTGAGACTACGACAACCTTTCCCTTGTGTAATGTCAATGTCGGCTATCACTTTGGCAGAATCAGCCAGCTCAGTGAAGACACGAAAACCCTCCTTCC-------------------CTCCTGTTTTTTCGTCTGCTGGTGGCATTCAAAGTGACCTTCCCTTATAAATATTGGTGAGTGACCACATGGGGAAAGCAGTTGTT-TGGTGCAGAGAAACTTGTTTC ........:.:--....x.:.xx...x:..x..:.:::.x.---------:...x.:.....:..x.:x.--..:...x------...........x.x---:..:....x..............xx..x:.x..:....x::xxx..-................x..................x.::.x.............................x..........................:....:......-............x....x...-.x........---.......-.:.x..x....................xx...:.:......:......x.:.-----------...:.:.:..........-.x.:...:.....x.......x:.:................................:.x..............:::..x..xx.................x..................:....:..-.........--...........................................:...................................................x.............................:....................................................................................x.................x.........................-....:.............:...:.:.x................::....x...-.....::.......--------------------x::...........:....x....:.....----.x..:..:::..........:.xx........----..:..:::xx....x:x..:...:----------.....:.:x::::..........:.:.....:...-----------...::.................:::...........:.....:.:............x...........:.:......:....x..:.....:.............:..x..:....:.x...x...x..:....xx.x::.x:.x...x.....x:...xx..x.:xxxx.........x..x:....-.::.x.:..x..x.:::::..:x:.x.---:......::....-.:....:-....:.x::x.x:...x.-..x...::...:x..x.:...------:x:....x..:x:.....x......:.:x.:.:.:.:...:..........:x...:x:.........x.......x..........---------............--......x.::.:..-------------------:.::.x..:....:...x..-:.......x...........x....::......:....x.xx......x...--.........::-.:.x.x...:.:x:..x.... 11M2I28M9D20M2D7M6I14M3D46M1D109M1I21M1D10M3D7M1I52M11I18M1I128M1D9M2I254M1I53M1I14M20I30M4D32M4D24M10I35M11D189M1D27M3D13M1I7M1D18M1D21M6I87M9I12M2I14M19D20M1I52M2I11M1D21M 1148/1414 81.2% 1491/94230402 0.0% 142/1414 10.0% 129370370 60844185 +46189 chr4 + 190214555 181362990 181362989 181364447 1458 CTAAAATCCAACAACTTTTAAATCATTCT---TCTTCATAGACACTATTACAGGTAAACTTGTTTTCCGACCGGGG-----------TAAGAGACCATTG------TGGAACAT-TCCATGCTATGTTAGGGCAGAGTTACATCAGGAGGCTATTATGGTCATGCTGGTACCAGG--TTGATAAGTGTGAAATTATCAGCAACTGAACATTGGGGGAATACATTTTTGCATCAAAGGTGCCCTTTACTCCTCAATCAGAAAACCAAACTGCTGATTCAAATGAGCAGACCGCTTAAAAT-TAAG------------------CGATTCTTCATCTGAA-AATTCCAT----------ATGCTGTATTTAACTACCTATTTCTAGGGATTTGCCCTTTTTTTAGTAGAAAATAGCTTTTAATATCCTAGGGAAAATTTACTGTTAAAGGTTTACATTAAACAAAAAGCAACTCTTGGTTGTCTACGTTATTTGGAAAGTATGTTCGATGCAAATTT----ACAAAAAGGATACATGTCACTGTGGGTCACTACTGAATATTCTTTTTGGGCTTTCTCTGTTGGATATACAATCTCAGCTAAATGTTTTGAAGAGGAGGAATCAAATAAATTGCCCTATTTTGGGTCTTTCTCATCTGTATACAGATGTGCAGCTCTAGTAGACCTGAAAATTGCCCAGGGACAAACTTTAAAAAAAATAGAGTGCTTTTGAGGCAGAAAATTGCTTTTCTGTGGTCTGGTCTAAAGGACAGGCAGTGACAGGAGGACAAGAAGTTGTCACCATGCAGTGATATTGTAAAGCATATCCTCCATAACAAAGAGGATAATTTGTTTTTATTTTC--TTCCTTGTTAACCACAAAAGCATCCAGTGCAATAACACTATGGCTTTGACTTAAACCCTTGCAAGCAG--------ATGCGCAATTAGATTTTTGAAAGTCCATCTTTAACCCACACATGGTACTTAGTTTCTAGAGAAAACAAACAGCTTAACATACTAGATCATTCAGTATTTCTCAA------TTTTGCCAAGAACCCTAAATGTCTGGGCTTTGGGATAAAATATAAATGCATTGTAGATTGGTCTTGGTTTCTGTGTATACAAGTCAGTTCCTCAGTATCATTTCAACAAGCCTTGTGTAGTTTAATATATATAAAAAAAGATTTTATGTATTTGGACTGGACCCTTGATATTTTTGGAAGATTATTTTATGTGGTTTAATTTCCATTTTTATGATGG--------TATGAACGAA-----------------AAATGGTAGAAAATATGTCTTTTGTGTGTTAAGGGATTTGAAACTCCTCTGGGCCTGTTATCATGCTAATGAGACAGCTGAGAGATAGCAGGATTTTGTGTATTAATCTTACTAGGCATTTGCACACCAGAACTGCTCATTTAGAGTTTTAATGGCATTAACTGTGAATTTGCACAAAATTAACAAAAAAAATG-CTTCCACATTATGGATCCATAATACCAAATGTTTATTAAAACC-TATTTAAATTATAATACAT chr4 - 94230402 51988064 51988063 51989555 42240848 42240847 42242339 1492 CTGAGGTCCAAAGACTG--AAGTTATCTTAATTCTGAAAAGAGTTTCATGCAGGTAAAATCATTTTTGAGACATGGATGGTTATAAATGGGAGGCCTTTGCTCCATTGCAAAATGTCCTTACTGTGTTAAGGCAAAACTGTACCGGGAGAATACTGAGGTCAAACTAGCTTGAGGCATTGATAAATGCTAAGTTACCAGCAGCCGAACACTGGGAGAATTTATTTTCCCATCCAAGTGGTTCTTTGCTCTCTAACAAGAAAG--AAACTG---ATTCAAATGAATGCACGTCTCAAAAAATAAGAAAAAAAAAATCCAACCACGATTTTTCCTCTGAACGACTCCCTCCCTCCTTAAGTGTTTTATTTAACTGACTAAATCTTA----CAGTCACTTTTAAAAAGGAAATTAACTGTTAATATCCTGGGAAGTATTTG-TGTTAAAGGTC-ATATTAAGCAAAAGGCAAGTGTAGACTATCTGAGGATTCTGTAGAAGATGTTTAATGCAAATTTTTTTGAAAAAATGATACGTGTCACTGCAGGTCATCTCTGAATATTCTTGTTGGGGTTTCTCTGTTGGATATGCAATCTCAGCTAAATGTTTTGAAGAGGAGGAATCAAATAAATTGCCCTATTTTGGGTTTTTCTCATCTGTATACAGTTGTGCAGGTCTAGTAGACCTGAAAATTGCCCAGAGACAAACTTT-TAAAAAATAGAGTGCTTTTGAGGCAGAAAATTGCTTTTCTGCAGTATAGTCTAAGGGACAGGATGTGACAGGAGGACAAGGAGTTGTCACTATGCAGTGATATTGTAAAGCATATCTTACATAACAAAAAGGATCATTTGTCTCTTTTTTCTTTTCATTTTAAACTACAAAAGATTTAATTGAAACA--GCTGAAGATGTGCCCTAGACCA--GGAAAAAGGCATTATAGTTTACAATTAAA-ACTGGAAGCTCCTACTTTAAAC---------TCCTTCTCCCCTG--------AAATAGC------TATTAAGTTATACAGTGTGTGTGAAATGTATGTCTGTCCACCACTTCAGAAGCCTTATTCTCAAAAGGGGAAATAAAAAAAGAGTGAAAAAGC-----TCATTGTACATGCATGTCAA------------ATATTAGCATGATTCTTGTAGTACAATA-AGAAAAGAAAGTGCTTTGTGC-TTTTGATTAGCCTCTTGATGTTT---GAGAATGTTTTTGTGTGGCTTAATTTTCCTTTTTATGGCAGCTTACACATATAAAACAAAATGAAGAGAGGAGTGGAAGGGGGAAGGAATATGCCATTTATATACTAAGGATATGAGGCCTCCTTTGGGTGCATTAT-ACATTAATGGGTCAGCTGAGATTTATTAGGA-TATGTATATTAATCTTTATACACATTCACATACTATAATTGTTCCTTTGGTACTATAATGTGATTAGCTGTGAATTTGTGCAATATTAACAATAATATGGATTTCCATATTACAGAACAGTAGTAATAAATGGCTATTAAAAATGCATGTAAAGTATGGGACGT ..:.::.....x:...x--..:.:..::.---...xx.x...xx:.xx.:........x.::....:x::x.:x..-----------.::...:..x...------..x..x..-...x.:..:.....:....:.::.::.:.:....:x..:.:x.....x:..:.:x:x...--.......:..:x..:...:.....:.:.....:....:....x:.....:x....x...xx.::....:...:::..:x.....:--......---..........:::x..xx..:....x-....------------------.....:...x......-:.:...x.----------:..:.x.........:x...xx...x:----:x.:.x:....xx.:x:....x..:..x..........:..:.:x....:-..........:-.:.....:.....:....x.x.x.::.:...:x.xxx.:..x.:.:x.....::..........----:x.....x.....:........::.....::x............x.....x................:.........................................................:..................x.......x.........................:..........-x........................................::..x.:......:.......xx................:.........:.........................:.x.........:.....x......:.:.x.....--...x..x.x...:.......xx.:x.x..x..:.--:..:x:.x.x..x.:..:...x--.x..:x..--------:.x::......:.-x:.x...:x...xx......x.---------.x...xx:::..:--------...:...------..:..::.:..x....:.x.x.x..------x.:..:.x.xx..:::.:.x.:..x:x::.::::.x:::.x.....x:x.xx..::.xx:.:-----.:x:...::..:..x....:------------..x.:.:..x.x:.:x......x:....-.x.x..:...:x::...:..:-...x..:.:.x.:......:...---..::..xx....:.....:.......:.x........:::.--------...:..xx..-----------------..:x..x.:::......:.x...:.:.::.....:xx.x:::x.....:....:x::....-.:::.....:.x.........xx..x:....-.x...:..........xx..x:....::..:..:.x..:..:..x...:.x::.x.....xx....:...........::...x........x..x.xx.-:.....:....::..x.x:..:..x:.....x:........x:-:..x....x...::x..:. 17M2D10M3I44M11I13M6I8M1I60M2I85M2D6M3D26M1I4M18I16M1I8M10I27M4D50M1D11M1D64M4I189M1D151M2I34M2D22M2D8M8I13M1D22M9D13M8D7M6D25M6I62M5D20M12D28M1D21M1D23M3D41M8I10M17I61M1D31M1D100M1I43M1I19M 992/1392 71.3% 1492/94230402 0.0% 166/1392 11.9% 129374926 60839629 +13980 chr4 + 190214555 181367675 181367674 181368080 406 AGAAAACAAACATTGATTAAAGAACCTAACAGAATGTTTTGCCTTGATAATTGCAGAAGCTGTGAGAAAGAATACACGTTTTCCAAATTGAACTTTGCTAAATGAGGGTCAGTAGCTTTAAGCTTTTTATAGTACAAGCTCAACCCTACAGTAAGTGAATATCTTAACCA-CAGGAACACTGAAAATTCAATGATATTTTCATAATTGCAATCCGGATAGTCAATAAACACTGCAACCTGAAGTAGCTCACTTTGAAGAAAACTTGACTGCCTAGCTAAGAACACTGTACCACATAATA----TTAATAAGCCAAACTACTGAACTCTGAATATAATAGGACAATTACCTCCAGGAAGCATTAGTATTCATTATACCCCAAACATTTGTTTGTACAGACAGCTGCAGTCAC chr4 - 94230402 51998649 51998648 51999052 42231351 42231350 42231754 404 AGAACCAGAACAGTGCTTGAAGAATCAAAAAGAAAATTTTGCTTCAGTAATTTCAAGTGCCATAGGAATTAATATATGTACACCATTTTGAACTCTGTTAAATGAAGGTTAGTAAGTATACATGCTTTATTGCTGTAGTTCTACCCTGCAGTGCAAGAGTATTTTAACCAACAGAAGCATCAAAAATTCAATAATATTCCCATTACTGCAATTCATAGAGTCAATACAAAATAAAACCTCAAATGTTTAACTGTGAAGAAAATGGAATCACTCTGCTAAAAACTTTGCATTTCATAATAAGTCTGAATAAG------TATTAAAGCCAAAATGCAATAGGAAAATTACCTTCAAAAGATATTTGCATTCACCAGACCAAAAACATTTCTTTTT-CAGGCATTTGTGGGCAC ....xxx:....x..x..:.....:.x..x....x:......:.:::.....x..::x..::.::...xx....:.:..x:x...xx.......:..:.......:...:....:x.x..x::x:.....x.:xxx..:..x.....:....:x:x..:...:.......-...:.:..:::..........:.....::...x.:......:.:x.x........x.x.x.:x.....x..:.:x:.x...x.........:xx:.:::.::x.....:...x:..:.::x.......----.x......------..:.:..x:.x:...::.......x........:..::.:::...x.:.....::.x...xx........x...x.-...:..x:..::.x... 170M1I128M4I8M6D76M1D17M 266/399 66.7% 404/94230402 0.0% 12/399 3.0% 129369026 60845529 +18630 chr4 + 190214555 181375248 181375247 181375674 427 GAGGATTTTTTGAGTATTATTTAGATATTTCATTGATATGAAAACGGAACACTTGAGACTACAGACAGCAGAATGCCCGAGGCAACCAAGCATACCAAAATATACTGCACAGAGAGACTTTTACTACTCCTGCTATTTAAAGACCTATTTTCATGAGCTTATTAGCTACTAGTGATCCCGAAGGAGAAATACAATTAAAACTTAATCATACCAAAAGCTGGGATTCTTCTGATTCAGCGAACTTGTAATCTATTATATTTAGTAGTTTACTTGTAAATGTCTGAAGGCTGAGAATGAGAATCATATAAATGGACTTCATTCCGTAGTGATACAACTGCTTTGAACTCACACCACAGGACTTGCCTTTTCTGCATGTACTTCACTCTGTCGGACCCTCCCTTTTTCTTTACACTTTTCAGGGTTTCTA chr4 - 94230402 52011169 52011168 52011558 42218845 42218844 42219234 390 GGGGATTTTTCAAGTCTCTTTT-------TCATTGTT--GAAAACCCAACTTTTGAAACTGCAGGCAGTAGGATGCCTTAGGCAGCCAAGCATATCAAAATATGGTGCATGGAGTGACTTTTTCTATTCTTGCTATTTAAAGACCTGTTTTTACAAGCT-ATTACCTACTAGTGATCCCTAAGGAAAAATACAATTAAAACTTAATCATACAAAAAGCTGAGGTTCTTCTGATTCAGCGAACTTTTAATCTTTGATATTTAGTAGTTTACTTGTAAATGTCTTAGTACTAAGATTGCAAAATGTATAAATTAGCTTCTGTTTG--------CTGCTTCCTCAAACTCATGTAGCACATTTTGCA----CTGATTGTGTATCACT---------------GTCTTCTTTGTATTTGTAAGGAGCTCTA .:........::...x.:x...-------......x.--......xx...x:....:...:...:...:..:.....:x.....:.........:........:x....::...x.......x...:..:................:....:.::....-....x..............x.....:.........................x........:.:.....................x......x.x............................x.:x:..:...x..x:..x::.......x::....xx.::.--------.x:..x.:.::......:::x:..x:x:....x----...xx...::x.....---------------x.:......::.:..x.x...:x:.... 22M7D8M2D120M1D163M8D33M4D16M15D28M 300/390 76.9% 390/94230402 0.0% 37/390 9.5% 129364079 60850476 +8275 chr4 + 190214555 181379453 181379452 181379720 268 AAGAAGAAATATAATTAATAGGTTTGGAAACCCT-TTTAACTTTTAGTAACTGTAATCAGTGATACATTTCTAGCAGCACATTTTTTTTTTTTCCTACAAGCTGTTTACAAAGGAAT-------------------TGTACTGCGACACACTTCATTCTGATTTGTTTTTCTCTTTTAATGCTGTTGAAACAGAATTTGTTCTCAGCCAG-TGAAGGATAATCTAACATAAGGCTTTTACAGATATAAAAGATTGGCTATTATCTCTTT---TTGCCTTCAGACACTTAAAA chr4 - 94230402 52012821 52012820 52013104 42217299 42217298 42217582 284 AGGAAGAAATACAATTAAAAGACTCGGAGAGAGTCTTTTACCTTTAGTAATTTTAATCAGTGATACATTTCCATAAACACATTTTTTT------CTGTAAACAATTTGCAAGGGAATGTATTTCATGCTGTTTTAACATGCTGAGACGAACTTTATTCTGATACATTCAGGTCTTTTAAAACAACTGAAATAGGACCCATTCTGTGCTTGCTGGAGGGTGCCATGTCACAAAGATTATAAAACTATAAACGACTG--CATTCTCCCTATGACTGGCCTTGAGACATCTAAAA .:.........:......x..::.:...:.xxx.-...x..:........:.x..................:.xx.:...........------..::..:.x:...:...:.....-------------------::.:...x...:x....:........x::..:xxx........x:.x::.....:..:.::::....xx..:x.-..:...:.:x:x.:x..:..:.x..x..x.:x......x..:..--:...x..:..x.---.x.....x.....::..... 34M1I53M6D23M19I74M1I44M2D12M3I20M 181/260 69.6% 284/94230402 0.0% 32/260 12.3% 129366632 60847923 +9744 chr4 + 190214555 181382365 181382364 181382612 248 TTACTCTATAGCAAACTGACCAGTATGATAAATATCTGTGGTTGTCACTGTTAGACCTGACCCATGGTCCCCATAGACCAGAAGGTTCTGAGTGACTGATTTTCT---TCTCCCTTTGTGTACGTGAGGATAGTTAGTGATTCTGTCTATTAGACTAAGCAAGTAAATAACCTTGGCCCTTTGGG-CCACAAGGATGACAGTGGCAGTAGGCTCAAGTTGCCTCCTGTCATTTTGTTGGCTTTTTTCTTCCC chr4 - 94230402 52015871 52015870 52016117 42214286 42214285 42214532 247 TCACTTCAAAACAACCTGATTGGAATGATT----TCTTTTGTCA-CACTACTAGATGTGACCTTGTGTCCCAGCGGGTTGTCATGTTCTGTGTGACTGACTTCCTCCCTCTCCCTTTGTGCACGTGTGCATAGTTAGTGATTCTGTCTATTAGACCAACCAAGTAAACATTGTTTGCCTTTTGGGAACAGAAATATGACAATGGCAGAGGACTGCAGTTGTTCCCTGTCATTTTTGGGGTATTTTTTTTTTC .:...::.x.:...x....:::.x.....x----...x.x..::-....::....:x.....:xxx.....x:::.::::xx.x......x........:..:..---............:.....x.x..........................:..x........:.x:x..x...:......-x..x..:x......:......x:.:..xx.....:::...........xxx..:x.....:..::. 30M4D10M1D60M3I77M1I66M 174/243 71.6% 247/94230402 0.0% 9/243 3.7% 129366494 60848061 +49244 chr4 + 190214555 181392901 181392900 181394058 1158 ATAATTTATGTTCTAGTAAACAAATCTATAAACAGAGATGTTTTTATTGGGGGT-----GGTGGTGATGAAACGTGAGCATCTGGCAACCACACCTTGATTCATTTTAGCCCCTAGAGTCGTGGTATGGCGCATTAATTTCTCAGTTTGTAATTTACCAGCTGCATTTAATGGAACCAATTTTCATTACATCTGTTCTATGGTTCAAAGAGCTCTTTTAGTTGCCAAAGGGGGCCAGCGTCACACAGATTCTGAGAGGG-GCTAATACACTGTTTCTTGAAGTATTAGATAACCAAGGATGATTCCTAGTTTTACAGCAAACAAATTATTTTGACAGAGGCAAGTTTTATATTCATGACTTAGCCGTTGGTAGATTTCAAATTAAAAGTATAGTGTGCCCTTTTCCCAGGAATTACATATTGATTTTCATGTCATTTTCTTCATAATACCCACTGATCGCCTGTCTTTACAATCAGTGGTAGATTTATTGTTTACTAGTTAAAGGAAACATAATTATGCTTAAGTAAATCCTCTTTGTAAATTACAGGTGGTTAGAAGA-------TGGGTATTTCTTAGGCAAATATGGAAT--TTATAAATGGTTCTTACATTTATTATAGTAAGCATTATTTACGGACAAGAAAAGGTCATAGCTCTTCATAGTGTATAGTGGGAACATTTTTAATAGTAGAAATGGTTTTGCTTGGGCAACTTAGCATTCTTGGTGTGTAATTTTAATCTCGTAAAAATATGTCACTGTTGTGTAATACCAAATGTAGGATTCCAGTTGAAAGCAACTTTCAATGCAAAGGGTTTT-CTCATGGGCAGAAGAGAAATTTGAAATGTTCTACAGTGCTTTGAAGTTCTAAAGCTTCAGC--TGGGAGAATTATAAAGCATTAAACCTGAAAAGTTTTCACCTGATGGTCATGAAATAGCATGCCAATATGAAAACTGACT--GTTTCACTTCCTCAGGCAAT-TTTTTTTTCCTTTTCAAGAGTTTCAAAAATATCATGGATCATGTTACATTGAGAAGATCATCTTAGAAAGACTTTATTCGTTTGAAATCATTAAAGTACATAACATAATTATATTTATATATGAAGCTTCAATGACAT------AATCTGTTTGTACTG-GAGTTTCACTGCAGTTGGAAAAGTC-----GAGTTTGTACCAAAA chr4 - 94230402 52022989 52022988 52024109 42206294 42206293 42207414 1121 ACAGTTCTTGTTTTAATGAACA--TTTATAAACTGTACCTTTTTATTTTGAGGTAAAAAGGGAGCAAAAAACTGTTAGCATCTGGCAACCACACCTTGATTCATTCTAGCCCCCAGAGTCTTGGTATGGTGCATTAATTTTTCAGTTTGTAATTTGCCAGCTGCATTTAATGGAACCAATTTTCATTACATCTGTTCTATGGTTCAAAGAGCTCTTTAAGTTGCCAAAGGGGGCCAGCTTCACACAGATTCAGAGAGGGTGCTAATACACTGTATCTTGAAGTATTAGATAACTAGGGATG-------GTTTTATAGCAAACAGATTATTTT--CAGAGGCAAATTCTATATTCATGCCTTA-CTACTAGTAGAATTCAAATTTAAACTGTCA-AAGTTTCTTCCTTGGGAGCCATATAT--ATTTTTTTGTCATTTTCTTTATAATAACCCCTGATGACTAATCTTTTGAATCATCAGTATTTTTTCTATTTATTAGTGAAAGAAGACATCACTACAC--GAGTGAATCCTGTTTTTAAAATAAATGTTTTTAGAAAACCTTTTTTGTGGAATACTAAGAAATGCAAGGAATAATTTTATGTAGTTTTT---------------AGCACTA-----AGACAGGCA-----------TTTTTATACT--------GAAACA-------------AGCTTGCATTACCAGAACAACTCTGCACACGTTGTGCATAATTTTAATCTTCATAAAATGTGTAGCAGTTCTATAGTATTAAATTCAAGTTTCCAATTGACAGCAACTTTCAATGAAAAGGTTTTTCCTCATGGGCTGAAGA-AAATTTGAAATGTTCTACTACACTTTGAAGTTCTAAAGCATCAGCCATTTGAGAATTATAAAGCATTAATCCCGAAGAGTTTCCACCTGACAGTCATGAAATAGCATACCTGTGTGAAAAGTGACTCAGTTTTACTTCCTCGGGCAATACTTTTCTTTTTTTTCTGCTGCTTCAGAAATATTATGTATCATGTCGTAGTGAGAAGATGGCCTTGGAATGACTAGATCCTTTTGAAATCACCAAAGTCTACAGTATCACAGTATTTATCTAAGACATTTCAATGACATTTAGGAAAGTTGTTTATACTGAAAGTTTTATTCTAGTTTGATAAGCTATGGGGAAGTTGCTCCAGAA .:.:..:x....:..:.:....--.:.......x.x:x:x....xx..x.:...-----..x:.::.x:..x:..x.............................:.......:......x........:..........:..............:.............................................................x....................x............x.......-.............x...................:.:.....-------......:........:........--.........:..:..........x....-.:::.:.....x........x...x.:.x:-:x.::::..:.:::...:::.:....--.....:x............:......x..x.....x:.:x:.....xx.....x::...xx...x:.:....:....x....:.:....x.:..::.--:...:......x...x....x..x.x..xx......:.-------..x.x.x.x..x..:x.x::.x.....--..x..x:.:...:..---------------....:..-----:....:.x.-----------.:..:...x.--------.:....-------------.:x.x.:x..:.:x.::.....:x...:x.x.x...::............:xxx.....:...x:.x...x.:..:..::....x:.:.x.....:....x..............x.....x....-.........x.....-..................x:::.................x.....--.xx...................x..:...:.....:.......::...............:..x:.:......x.....--....:........:......-:....:..::.....x:xx.:....:......:...x.......:::.x.........x::...:...x....xx..:.x..........::.....x:.:.::..x.:x:.......x..x..x::...........------..x:.....:.....-:.....:.:.x:....x..x...::-----..:x...:x...:.. 22M2D30M5I200M1I41M7D24M2D28M1D30M1D26M2D97M2D38M7I27M2I15M15D7M5D9M11D10M8D6M13D126M1I15M1D45M2I79M2I20M1I138M6I15M1I25M5I15M 840/1088 77.2% 1121/94230402 0.0% 103/1088 9.5% 129369912 60844643 +3241 chr4 + 190214555 181403074 181403073 181403191 118 ATATATATATATATATATATGTAAGAAATATTTTTAAAACTAAAAAAAGTTCCACTAAGTTTTTCTGGGTCCATGTAACTTTTTAAACTTTGCGATAGAACGGTTTTCAAATATACAC chr4 - 94230402 62869303 62869302 62869420 31360983 31360982 31361100 118 ATATATATATATATGTGTGTGGAAGAAAAGTTTTTTCAAGTACAGAAAGCTCCATTGTGCCTATTCGATTAATTTTAGGTAGTTAATTTACCTGGAAAACATTCTCTCAAATATACAC ..............:.:.:..x......x:.....xx..x..x.:....:....:.:x.::.x.::.:x.xxx.x..:x.xx....x:.x:x:.:x.:.xxxx:.:............ 118M 73/118 61.9% 118/94230402 0.0% 0/118 0.0% 118533771 71680784 +3013 chr4 + 190214555 181423953 181423952 181424011 59 AAGATTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAGAAAGAAG chr4 - 94230402 36126948 36126947 36127006 58103397 58103396 58103455 59 AAGACTCTCTCAAAAAAAAAAAAAGAAATAAAAGATGTACAGATAATGACAGAAGAAAG ....:...x...............:...x....:.x:x.x...x..x..x....::... 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 145297005 44917550 +3131 chr4 + 190214555 181423953 181423952 181424027 75 AAGATTCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAGAAAGAAGGAAAGAAAGAGAGAAA chr4 - 94230402 30973295 30973294 30973369 63257034 63257033 63257108 75 AGGATGCTGTGAAAGCTAAAAAGACTAAAAAAAGAAAAAAAGAAAAAAATGGAGCACTGAAAAGAATGGAAGAAA .:...x....x...:xx.....:.xx.......:.........:...:.x:..:x:xx.:......x.::..... 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 150450658 39763897 +3034 chr4 + 190214555 181423963 181423962 181424014 52 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAGAAAGAAGGAA chr4 - 94230402 34672398 34672397 34672449 59557954 59557953 59558005 52 CAAAAAGAAAAAACGGAAAAGAAAAAAAAAAGGGAGGGGAGGAAATGAGAAA ......:......x::....:...........:..::.:.:....x:..:.. 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 146751565 43462990 +3072 chr4 + 190214555 181423975 181423974 181424050 76 AAAAAAAAAAAAAAAAAAAGAGAAAGAAAGAAAGAAGGAAAGAAAGAGAGAAAGGTTTTATAATGGTGGAGAGAAA chr4 - 94230402 85934331 85934330 85934406 8295997 8295996 8296072 76 AAAAAAGAAAAGAAAGAAAGAAAAAGGAAAATTGAAGTCAAAACAAAGAAACTATTTTTACATTTATAGGGAGAGA ......:....:...:.....:....:..:.xx....xx..:.x.:...:.xx:x.....:.x.x:.:.:....:. 76M 51/76 67.1% 76/94230402 0.0% 0/76 0.0% 95489644 NA +3095 chr4 + 190214555 181426890 181426889 181426975 86 ATATATATAGACATATATAGACATATATAGACATATGTACATATATAGACATATATATATACACACACACACACAGACACACACAT chr4 - 94230402 8395788 8395787 8395865 85834538 85834537 85834615 78 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATG--------CCTACATTAATACACACACACACACACAGACACAAAT ..:.:.:..x:::.::...:....:...xx.........::--------.x..:..xx.................x.x.....x.. 41M8D37M 56/78 71.8% 78/94230402 0.0% 8/78 10.3% 173031102 17183453 +39014 chr4 + 190214555 181430631 181430630 181431508 878 TGAATCATTTGGACAAAAAAAGTTCAACAAAATAGTTGACTGCTTTACGATACAGATGGCATCTGTCTTTCAAATAACTTAAGTATTTAAATTGAGTA-GTGAAAATACCTGACAAATCTTTTTCAGACTAGTACA-GCAAAGAAAA------------CTGGAATAACATCTAAG----------ACATCAGAAGTTATTTGTAGACCTTCAAGATTTTCTTTTATTTAGGGGG---TAAACCATTGTGCCTGTCCCTCTCCTCTTTGTCTCTCTCTTATGAATTCC---------ATCTGCTTATA-AGTGTCATTGCAGGAGCTTGCAAGGAAACACTTTTGATTAGCACTAAAAAGGTCTAATGTTTGAGACCTTGAATGCAAAACTTCTGATAAAAATAAACTTCAAGGTCTCAGAATACTCTTATCAGATCAACC------------GTATGGTCCCAGAGTAGGTTGCTTAAATCTTCTTGGCTAAGCTTGA-GAGTGCAAAGCTTAATACCCACAGGCTTGCAATCTTTTTGAATGTGATTATAATTCAGCACCAGCTTTGCATCCTGGATAAAGGTTCCCCTTGAACACAAAGTATGTTACATGCTTGTGTGCTAGTGATCAAAATACTCAGAGGATTATGGCACTTGCTGTTCTTAAACCTCCAAAATGGTGTTAAAATGCTACATCCAATCAGCTAAGCTGTAAATTAAATTTTTGTAGATTGAAGACATAGTTTTATTTCATATGCCAGAAACTCATTTCAACCCTAGCATTTCTGTTAGCACATTGCATCTAGCAGCATAACTCAAGAGGTTTAATGAAAGTTTAAAAACAATCTGTTGCAGATTTTGTGCCTAATTTATTTTTAATTGCAAATTGTACAACACATTA----TTGCCTGTGAAAATA-GAAATTTAATTT chr4 - 94230402 52038391 52038390 52039303 42191100 42191099 42192012 913 TAAATTACGTAAGATAAAAAAAAAAAGAAAAATAGTTTATTGTCTTTGAAGGTGCATACCTTCTGTCACACAAATAGCCTGAGACTAGAAAGCAAATGTACGAACATATCTGACAAATTGTTTCCAGATAAGCAAAAGCAAGGAAAATCTTGCCTGCTACCGaaaaaaaaaaaaaagaggaaaaaaaaaTCATAGCTTATCTTTAGGCTTTCAAGATTCACTTTTATTTTGAGAGATTTAAG--ActtttcctttccctttttctttcctttttcctttacatttttttcttttattATGTTCTTGTAGAGTGTTTGTGCTTGAGCTCATAATGAAGCTCTTTTGATCAACACTGAAAAGGTCTAATGGCTGAGTCCTTAAATGCAAAACTTCTGATAAGAATAAACTTCAAGGTCTCAGAATGCACTTATCAGATCTACTCTAGGAATAAGTGTCAGGTCCCAGAGTAGATTGCATAAATCTTTGTGGTTGAGCTTGGTGAGTGCAAAGCTTAATACCCACAGGCTTGCGATCTTTTTGAAGGTGATTATAATTCTGCACCAGCTTTGCATCCAGGATAAAGGTTCCCCTTGAACACAAAGTATGTTACATACTTGTGTGCCAGTGATCAAAATACCTGAAGGGTTGTCGCTCTTGCACTTCTTAAACTTCCAAAATGATGTTAAAATGCTATATCCAATCAACTAAGCTGTAAATTCAATTACTGTAGATTGAAGGCATAGTTCTGTCTTATACAGCAAAAACTAATTTC------AGTATTTCTGTTGCCATACTGTATTGTGCAGCATAACTCAAGAGTTTTACTGAAGGCTCATAAGCAGTATATTTTGGA--------CAATTTTATT----AATGTACGTTGTGCTAAGGATTAGTCCCTGCTTATGAAAATATGCAATTTGATTT .:...:.:x.:::xx......:xxx.:x.........x.:..::..xx:.x:::x..:x.x......x:x......:.:.:..xx.xx...x::.:.:-::...x...:.........:x...:....:x..:.x.-....:.....------------.:.:..x..x.xxx..:----------.x....x.:x....:.x...:.:.........:x.........x.:.:.---...:--.:.x.x...x.....:.::::..:x.:.:..::...::xx..::---------..x.x...:..-.....:xx...xx.....:::..x...:.x........:.:....:.............x:....x....:...................:.......................:.x...........x..:------------..xx.............:....x........:x...:.:......:-..............................:...........x.............x.................x.....................................:.........:..............::::...:..:.x..x.....xx.........:.........:.............:.........:..............x....x:............:.......:.:.:.:...::x..:.....x.....------..:.........:x..:.:..:..:xx.................x....x....:.:.:.x..:..:.x.:..x::..--------.x.x......----.x..:.x:....:.x.x:x....----:...:.:........-.x.....:.... 98M1I37M1I10M12I17M10I49M3I4M2D44M9I11M1I132M12I46M1I272M6D78M8D10M4D23M4I15M1I12M 652/858 76.0% 913/94230402 0.0% 75/858 8.7% 129392240 60822315 +3126 chr4 + 190214555 181431511 181431510 181431606 96 TTCCTGTTTTTTTTTTGTGTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT chr4 - 94230402 3836178 3836177 3836273 90394130 90394129 90394225 96 TTTCTGTTTTTTTTGTGTGTTTTTTTTTTTCATGCTTCACAGTATTTCCATTTCTTTTTCACTCTCTATTCCATTACCATCTACTTATTTTCTCCT ..:...........x........:...:..:x.x::.:x.xx.x....:x.:.:.:....x:...:.x..:.x..x::x::.x...x:.....::. 96M 60/96 62.5% 96/94230402 0.0% 0/96 0.0% 177595333 12619222 +3035 chr4 + 190214555 181431570 181431569 181431628 59 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTTAAATAACT chr4 - 94230402 28071375 28071374 28071433 66158970 66158969 66159028 59 CTCTATTTCTGCCTCATTTCCTCTCTCTCTCTCTTTTCTTTTTTTCCTTTGGAGTAATT ..:.x.....x:..:x:..:..:...:...:..........:....:...x:.:...:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 153360195 36854360 +14979 chr4 + 190214555 181432176 181432175 181432882 707 TTTTCTTTCGGAAAGGTTTGTCACACTCTGCTGCATCTGGTAGTTTGACTTTGGATG--GGAATCTGAAATGAAGCTTAATGTGAGTGCTAT---CAAGTGATTCTAGGAAAATGTCAAAATACAAGCAAAGAAAACAAAGGTCTTTTGTGCTGGATTTGCATTTCCTTCTGAAATCTTTGGCACTTTACATCAGAAAGGGAGTTGTATTATTTATTTTCAATTTCCTGACTCTCTATTCTTCCTCTG-TCCTTAGAGAGTGGCCATCAGCACACTCCCTGCAGTCTTTCCCTCTCCTTGCTGAGCATTGTGTCAGT-GAAGCGAGCTGCCTTCAAAGCTAGTGACAAGCGCAGGGCTGCCTCTTGCCAGAGAGGGGTGTGCATGCATGTCGCGACCAGGTCTCCCTTCCTGCAAGACAGCTCTCTCTGCCTCCACAAGGCCCAGCTTCCAGTGACGGCTGGATCAATGTGACATCTTGCTTTGGG-TAGCCGTTGTGAGCAGGTACATTAGACAGCATCACAGT--TTCCAGAAGGAACACATGTAGTGAGTGAGTG-CCTTGACCTCCTCTAAGACATGATAGA--TAGTTCATATGCAGGTAGGACTTGGGTCT------------GGGGTAGA---GGAGATGAACTGAAA----CTGCAATATTCT-GAGCACCTGAACTGCACTGCCACTGAGAATTAAGCGGACTAAAGGTCAGGAAGATGATCTGGAAATAA chr4 - 94230402 52041333 52041332 52042027 42188376 42188375 42189070 695 TTGCTTCCCAAAGAAATGTATCCCACAGTGTTACTACTTCTGTTGTGACTTTGGATGCTGATATTTGTGATGAAGCCTATTGCTGGTTTGATGACCAGGT--TTAGAAGAGGCTGTCAAAACGTTAGGAAAAGAAGCAGCAGCGCTGTGCCCTAAAACTGCTTTCCCTTTTGAAACCCTTGGCACTTTACATCAGAAAGCTCATCGtattatttattttta------taaatatttttaaatCATCTGATCCATTGAGAATGGCCATCAGTATA-------------TTTTTTTCCCTGGCTGGCAGTGGTGTCAGTAAAAGCCTGCTGCATTTACAGCTAGTGTCAAGTTCTTGACTGTCTGTAGCCAGCAAGGGGTGCTTACGAATGCAACAGTCAAA-CTCTTTTCCTGGGAGACTGTGCTTCT--CCTTTGCAAGGGC---CTTCCTCTGACTTAGTGATCAATTTGATATCTTGTTTCAAACTCGCTGTTTTGAGCAGGTACATTAGACAACATCAAACTAGCCCCTCCAAGAAAGCTTGTTAGGTATGAATATCCTTGACCTTCTGTGAGATGTTAGAGATGTGGTT------CAGGTAGCATT---GTTTGTCATGTTGTGAGGGGCAAAATGGTACTTGAACTTAGGACTCCTGCTGTTTTTTGGAGCATCAGTAATGTGCCGCTACTGAGACAAAGGCAGAGGAGGGGACAAG---------TGGGAATAA ..x::.::.::.:.::.x.:..x...xx..:.:.xx..xx.:x.x............--.:x..:..x:.......:..x..:x:..x:x..---..:..--..xx.:..::x........:::x..x...::..:..:x:.:x:.x..:x..::.x:...x..:....:.....:.:.....................xxx:.:..............:.------.:.x.x.:.x.xxx..x....-...x.x....:..........:.:.-------------..:::.::...x....:xx:.x........-:....xx.....x..:.x........x....:x.xx.:...:..x.x.....x:.......:x:.:.x...:x:.:::..::-...::......x:....x.:x..:::--...:::.....x.---.....xx....xxxxx.......x...:......:..::::-.x..:...x...................:.....x.x.--::..xxx.:...x:.x...x:x.x:...:.:-.........:..x.:...::.x.x...--.:...------.......x.:.---..:.------------....:.:.---.x.xx......x.::----....x:.x..:.-.....:.x.x.x..::.:..:.......xxx.:..:..xx.::..x..:.---------...:..... 57M2I33M3I5M2D119M6D21M1I25M13D30M1I82M1D26M2D13M3D41M1I38M2I31M1I27M2I5M6D11M3D4M12I8M3I15M4I12M1I50M9D9M 438/662 66.2% 695/94230402 0.0% 78/662 11.8% 129390843 60823712 +18204 chr4 + 190214555 181443624 181443623 181444088 465 CAAAGTCCGTGATGAAATCTATACATGGGATCTCTACAACTTATTAC--------CTAAAAATATTAGG---AGACAGAAATATCGAGTAACTCTAAAATAAAT--TATACTTTGATATTCAATTTGTTCTATATTTTCAAGCAGAATT-AGTTTTGAGAAGTATTTTAGTTCATTTATTATTGGAAAAGACC-TTACTAGCTTATTCAAGCAAGAAAATTACCCCAAAAGCTTACAAGATTTATAATGCTTGGGGAAAAAAAA------------------AAAAAAGCAATTCAAAACCTAATGAGACATTTTAGGCCTCATTTACATCTCTAACCTGACCCATTTTCTGCGAAACGTTTTTGTTGGTAATTTACATACTAAAAGCTAGTTATTTATCCATCCCTAACCAAAAAGTTGATGAGATTACTAATACCACAGTGAAGTTAACATTACCCTGAAAGCTAAATACGACCATTTCTAGAAGGTTGACTATTG chr4 - 94230402 52046814 52046813 52047284 42183119 42183118 42183589 471 CAAATTCCAT-----AACCTAT-TATGGAATTTGCCCGAGTCATTAGAAATAATGTTAAAAATATTAGATACGAAAAGAAATATT------CCATAAATTAAACCGTCTATAATGGTATTCAACTCAGTATATATTTTCATGCAGAACTGAGTTTGGAGAAGCATTT--ACCAGTTTATTATTGGGGAAAACCCTTGTTGGCTTATTCAAGCAAGAAAATTACCCCCAAAGCCCACAAGATTTATAATGCTTAGAAAAGAAAAAGAAGAAAAAAATTACAACAAAAGGGCAATTCAAAACCTAATGAGACATTTTAGACCTCATTTACATCTCTAACCTGATGCA-TTTCTTCAAAACGTTTTTCTGACTAATTTGCATACTAAAAGC-------TTATTCTTCCCTAACTAAAA---TGATGAGCTTTCCTG-GCTGTGTTGACATTAACATTACTTTAAAAGCTATTTATATTCACTTTTAGAAGACT-ACTAGTG ....x...:.-----..:....-:....:..:.x:x.:.x.:....x--------:............:---::.x........:------.:x....x....:--.x..:xx..:.......:.::x.x..........x......:.-.....x......:....--:::x:...........::..:...-..::.:..........................x.....::..................:.::..:.....------------------....::.............................:.......................:x..-.....x.:..........x.x:x......:............-------....:.x........:....---.......x..x.:x:-:.::::x...x:..........::.:.......xx..::x:..:..:......::.-....x.. 10M5D7M1D24M8I14M3I13M6D13M2I43M1I17M2D24M1I70M18I63M1D42M7D20M3D15M1D56M1D7M 341/438 77.9% 471/94230402 0.0% 60/438 13.7% 129396810 60817745 +3181 chr4 + 190214555 181456085 181456084 181456130 46 TGGTAAATATATGTGTGTGTGTGTGTGTGTATATATATATATATGT chr4 - 94230402 89821273 89821272 89821318 4409085 4409084 4409130 46 TGGGGAAAATGTGTGTGTCTCTGTGTGTGTATATATATATATATGT ...x:..x..:.......x.x......................... 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 91634812 NA +3345 chr4 + 190214555 181456086 181456085 181456257 172 GGTAAATATATGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTG-------TACACATGTGTGTGTATATATGTATATATGTATATGTGTATATATATAT--------GTGTATATATATATGAAGCTATTAAGTGACAGAGTTGAGGTCTGAATTCTG chr4 - 94230402 40224669 40224668 40224851 54005552 54005551 54005734 183 GACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT---TCAATATAATTTGTTGATTCTGCATTCATTACACACATAAGTAACTAAATGTTGTTGTCTATATGTTTACACACATGTTTTGGGAATTGTAGGTTTATGTCAAGCTGATTGG-AAAACTCTTGAGAGCTGATTCCTG .::.:..x.x.............:...:......x...:........---.xx:.:.:xx.x.x..xx.x..-------......::.:x..:xx..x....xxx.:.x.......x..:.:.:..:.--------x....x:.x...:.x.....:x.x:.-:.x.xxx.....:x....x.:... 47M3D22M7I49M8I26M1D24M 110/168 65.5% 183/94230402 0.0% 19/168 11.3% 141231417 48983138 +3129 chr4 + 190214555 181456086 181456085 181456181 96 GGTAAATATATGTGTGTGTGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTA chr4 - 94230402 81401284 81401283 81401373 12829030 12829029 12829119 90 GGAAAAAAGATATTTTTGTGTTTGTGTTTAAAAATATATACA------TAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ..x...x.x..:.x.x.....x.....x..x.x.......:.------.:x.x..:::................:.x....x::.:.:x..:.::. 42M6D48M 62/90 68.9% 90/94230402 0.0% 6/90 6.7% 100054802 90159753 +3151 chr4 + 190214555 181456101 181456100 181456244 144 GTGTGTGTGTGTGTATATATATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATATGTATATGTGTATATATATATGTGTATATATATATGAAGCTATTAAGTGACAGAGTTGA chr4 - 94230402 35554922 35554921 35555064 58675339 58675338 58675481 143 GTATGTCTTTCTGTCTTTACAATTTTAAGTATAGGC-TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTAGAGATCCAAGTTCAAATACAAACAGTTTTTCCAACAGACAATGCTGA ..:...x.x.x...x.x..:.xx.x..x..:.:x.:-.:x:.:.:.xx.x........:.....:..x..........:.::...::x.x.......x.x..x:.x..x:.x...:.x.:::xx:.x::..xx....:x.:... 36M1D107M 86/143 60.1% 143/94230402 0.0% 1/143 0.7% 145901179 44313376 +3159 chr4 + 190214555 181456120 181456119 181456185 66 TATATATATGTGTGTGTGTGTGTGTGTAGGTGTGTGTGTACACATGTGTGTGTATATATGTATATA chr4 - 94230402 39267143 39267142 39267208 54963195 54963194 54963260 66 TATAGATGTGTGTATGGGCGCACGTGGCTGTGTGTGTGTATATAGGTGTGCATCTGTATGAATATA ....x..:.....:..x.:.:::...xxx...........:.:.x.....::.x.:....x..... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 142188977 48025578 +17761 chr4 + 190214555 181466421 181466420 181466779 359 TTTAAGGGTGATGTTGTCCTAAGGAAACTATATGCCACAGTGTGATTC-CATCATGCTGTGTGAGCCACCTACACTTTACGGTAATTGGTTGTATGTATGTAATTTATTCCTATAGAATCCATTATTATAATATAAGAAACTCCCTGGAAGGT--AGAAAGAAGAACACATCACAGTCAGATTGTAATAACTATTTGGACTATTTAAAATCACTCATCGAGCTCCATATTAGAAAAACAAGCCCTCTACAGTTATCTAGTTTACACATTTCATATGGCTTTCTGATTTCA---TACTTGAGACAGAACATGTTACTACACTTTTTAATATTGATGTTTAGGAAAACAATTG-ATTAAAATGTGAAA chr4 - 94230402 52053758 52053757 52054120 42176283 42176282 42176645 363 TTTAATGGAATTGTTGTTACAAAGAAGCAGTATCCAACAGTGTGATTTGCATCATGCTGTGTGAGCCGCCTACACTTTTCAGCAGTTGGTTCTGTGTCTGTAATTTATTGCTCTAGAAACCATTATAATAATACAAGAAATGCTGCAGCAAGTGCAGAGGAAAGAACACATCACAGTCAGACTGTAATGACTATTTAGACTATTTAAACTCACTCAGCTTGTTTTACATTAGAAAAACAAGTCCTTTTCAATTACTTATTTTATGCATTTTATTTGGCTTTCTGGTTTCATTGTGGTTGAGATTAAATACACTATTACACATTTTAAGAT---AGTTTATGATAGAAACTGCCCTAAAACGTAAAA .....x..x:x......:x:..:...:.x:...x.x...........:-..................:..........x.:.:.:......x.:...x...........x..x.....x.......x......:......:x.:x::.x.:..--...:::....................:......:.......:...........x.......x.xx.:.::.:..............:...:.x..:...::..x....::.....:..x..........:.....---.:x......:x:..:.:::..:.....x......x..---x.....x..x.:x..:..-x:.....:..:... 48M1I104M2I135M3I37M3D18M1I14M 273/356 76.7% 363/94230402 0.0% 10/356 2.8% 129412663 60801892 +3011 chr4 + 190214555 181467060 181467059 181467132 73 AGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTT chr4 - 94230402 57691396 57691395 57691468 36538935 36538934 36539007 73 AGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ....::.:::..:x.......:...x.........:::.x.:.::x...x.....x.xx..x.::........ 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 123775664 66438891 +3100 chr4 + 190214555 181467067 181467066 181467142 76 GTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTT chr4 - 94230402 57691393 57691392 57691468 36538935 36538934 36539010 76 GTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATATTTTAATTTGCATTTTTTT ..:x...::.:::..:x:......:..:x..........:..x....:x...x.....x..xx...x:x....... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 123775674 66438881 +3331 chr4 + 190214555 181467069 181467068 181467147 79 GTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882756 15882755 15882832 78347571 78347570 78347647 77 GTGTGTG-GTAGCTGCAT-TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTTGTT .......-..:xx...:.-..x......................:..xx.:.:.xx:.......:..x...x....x.. 7M1D10M1D60M 60/77 77.9% 77/94230402 0.0% 2/77 2.6% 165584313 24630242 +3044 chr4 + 190214555 181467070 181467069 181467127 58 TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATT chr4 - 94230402 32959568 32959567 32959625 61270778 61270777 61270835 58 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATT .....::x.:.::::.x....x.....::...:.......:.......:.x....... 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 148507502 41707053 +3039 chr4 + 190214555 181467077 181467076 181467135 59 GTGTGTGCGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTT chr4 - 94230402 50558510 50558509 50558568 43671835 43671834 43671893 59 GTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTT ...::..:..x..........::........:..:....x.:.x.x.x.xx........ 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 130908567 59305988 +3089 chr4 + 190214555 181467089 181467088 181467127 39 GTGTGTGTGTGTGTGTATATATATATATATATATATATT chr4 - 94230402 9151856 9151855 9151894 85078509 85078508 85078547 39 GTGTGTGTGTGTGTGTATATATAGATATCTGTATATATT .......................x....x.:........ 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 172315233 17899322 +3294 chr4 + 190214555 181467090 181467089 181467141 52 TGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTT chr4 - 94230402 19559296 19559295 19559347 74671056 74671055 74671107 52 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt ..............................:.xx..x.....x.x.x..:.. 52M 44/52 84.6% 52/94230402 0.0% 0/52 0.0% 161907794 28306761 +3047 chr4 + 190214555 181467092 181467091 181467148 57 TGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 15882773 15882772 15882829 78347574 78347573 78347630 57 TGAGTGTGTGTGTGTGTATATATATGTAATTGTGTTGGTTTTTTTCTTGTTTGTTTT ..x..........:.:.........:..xx.:.:..xx.......:..x...x.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 165584319 24630236 +3305 chr4 + 190214555 181467094 181467093 181467160 67 TGTGTGTGTGTATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTAGGCAGAGTCTC chr4 - 94230402 92735348 92735347 92735414 1494989 1494988 1495055 67 TGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTTCCCTGAATCTC ..::.:.x.:...:...:..:.:...............:.x.........:.x..xxx.x..:.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 88731746 NA +3165 chr4 + 190214555 181473744 181473743 181473811 68 TGTAATTATATAATTATGTGTATGTACACATACATACCTATGTATGTGTACCCACATATATGTATACA chr4 - 94230402 4481685 4481684 4481752 89748651 89748650 89748718 68 TGTCTTCATATAGGTGTGTGTATGTGCACAAACATACACATTCACATACTCTAACATATATGTACACA ...xx.:.....:x.:.........:....x......x:..x:.::.::x.:x...........:... 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 176992059 13222496 +53084 chr4 + 190214555 181475430 181475429 181476426 997 TTTGCTCTCTAGGGACAGTAGAGATGTCTATAGAATATTTTT-GCCTCTGTGGCGTATTTGAGATGTGAGACACATTAACGATGAGAGGGGTTTTAGGTCAGAATCACTCTGCATCATAGATGCCATTATCTGCTGATTTAGCTGGGCTGAAAACTGCTGAAAAATAATCCTTTTTGTGCCCTTGTCAGTGGCTTTAGCCTAGAGTTATAGAAAATCAGCTCTACCTGAGTCAGATAATCATTACAAAATGA--ATTTTGTTCCTGACTCAATGGAAGTAATTGGGGAGAAAT--ATTTGATAGGTATGATGAAGATTAACTTAAGTTAAAGCTTTCTAGTACTTAAAAAGTAGTAAGTGCTGCTCATAATTGAGCCAATATAGGCATCTGCAAATTATCCTTCAAACT--GAATGTAGGTGATCACTTAAAACA-TTTCTACCCCCGCAAAGCTTGATGTTCTCCTTTTCCTTGGCTCTGGCAAGGGGCACCGGGTTCACCCCGCCGAGGTCTCCCCTTGCAGAGCGCAG-AGCTGATTACCCAGCAGGCGGTGCGGCTCCAGCGGGG-AAGTCAGAATGGTGCTGACTGTTCCCTGGGGAGGGACATCCTGTAAAAACACCAAGGTTGAGAACTGTCATATTCACAGCAGTAGGTGCA-TTTCCTCAGAAATTAATGGAGCAAGCTGGGCAAAAATG--TTTAAGCTACATCTTCCCTAGAGTAAGATGCAAATTCAAAGCTCTTTTGAAGCCCCGGAATGAAAGTTAAAGATAAGACATTTTAGGGGTTTTTTTTTTTTTTTTTTGACATTGATAATATAGGCAACCCTAGCACCAGGAATATTAAATTGAAATGCTAGATATGTGGGAGAGGTGTGATTCAGGCTGGCTCCGAATGCAGCAACAACTCATTCTTGAGCCTGTTTACCCATGCGGCTTTTAATATATGATTACTG----GGACGTGAGGGCAGGTTCCTCCCACCAGTCAGTTATG----GACGTGCAATCCTAT chr4 - 94230402 52061400 52061399 52062396 42168007 42168006 42169003 997 TTTTTTTTCTTGATACTGGA-AGATGGCTGTAGCATATTTTTCACCACTGAAGCATGTTTGAGATGTGAAAAACATTAACAATGAGGAGAGCTTTAGGTCAGGATCACT--GCATCACAGATGGCATTATCTTCTGATTTAGCTGGGTTGAAAACTGCTGAAAAATAATCCTTTTTGTGCCCTTGTCAGTGGCTTTGGCCTAGAATAATAGCATATCAGCTTTACCTGAGTCAGATAATCATTACAAAATGATTTTTTTTTTCTTAACTCACAGAAATCATTGGGAGAAAAATAAATTTGATAGGTGTGATGAATATTATTTTAAGTTAAAGCTTACTGAGATATACAAAATACTAAATGCTGCTGGTAATTGAGCAACTCTATGCAATTGTAAATTAGCTGCTCGACTTGAAAAAAAGGCGATTACTGAAAGCACTTTTTCCCCCTAGAAAACTTGCTGCTCTCCTTTTCCTTAGCATTCACGAGGGGCATTCAGTTAATCATACTGAGGTCTCTCCCTTAGCGCTGCAGTAGCTGATTACCCAGCAGGAGGTGCAGTTCCAGCAGGGTAAGTCAGAATGGTGTTGGTCGTTCCCTAGGGAGGGACATCCTGTAAAAACACCAAGGTTGAGAACTGTCATATTCACAGCAGTAGGTGCATTTTCTTCAGAAATTAATGGAGCGAGCTGGGCAAAAATGTTTTTAAACTACATCTTCCCTAGAGTAAGATGCAAATTCAAAGCTCTTTTGAAGCACTGGAATAAAAGTTGAAGATAAGACTTTTTAG----------------TTTTTGACATTGATGATATAGGCAACACTTGCACTGCGAATATTCAATTGAAATGGAGGATAAGTGGGGCAGATGTTATTCAAGCAGGTCCCAAATGCAGTCCTAACT-ATTTCAGAGCTGGCTTAACTAAGCTGCTTTTAAT-TATGCTTACTGCATAATACCTGATAGAGATTGCCTTCCTTAAGATTGTTATGAATTGATTTGCAATGCTAT ...x:.:...x.:x..x.x.-.....x..:...x........-:..x...x:..:.:............:.x........:.....::.:.:..........:......--......:.....x........x..............:................................................:.......:.x....x.x.......:..............................--x....x...:.:.....xx.:..x:.x.x..:..:....--...........:.......x....x:..............x..::x.:x..x...:..x...:.......x:.........x.x.x..x...x:..:......x.:x::x:...--:..x:x...:...:...x...:..-...:.x....::x...:....x..:.............:..x:.x:.:.......::x:...x.:.x::.:........:..:.xx:x:x:....-..................x.....:.:......:...-..............:..:::.......:..............................................................-....:.................:...............--.....:...............................................x.:.....:......:..........x......----------------..............:...........x..x....::x.......x..........xx:....x.....:x..:...x.....:..x..::..:.......:xx:....-...::x....:x.:...x.:.x..x.........-....x......----:x..x...x:.x::x.x...:..x:x..x:x......----..:x......x.... 20M1D21M1I66M2D141M2I39M2I114M2I24M1I95M1I37M1I90M1I38M2I86M16D108M1D34M1D11M4I37M4I15M 785/976 80.4% 997/94230402 0.0% 42/976 4.3% 129414030 60800525 +27037 chr4 + 190214555 181478632 181478631 181479184 553 ATTCTTTCAGTAAAAGAACACTTTCTCTTCAGCAT--ACTTTCTTTAAGTATATCAAGAGATTTAAATTTAGATATCTGAAAACTCCCGCTAGATGACACATTATTAAAACATCTGCCTTTCCATAAGCCATTCTGTTCCTTGCCATTCCACATGTCCTTTTCTACTTCACCAGACAAAATTGCCCAATCTAAATTTCAGCTCAAGTGTTTGATGGTTTTCACGCTGAGCTCAAACTGTTAATGCTTCCCTGAGAGAATAGAATTGAAACGGGATTTAATCTAAAATAACAAAATAGAATAAGGGTTTTACATATAAATAAGTAATGCTTTGCACATTCTTATGCAAGTTTTTCTCTTCTAGATTTTGCACCTAGTAGAGAGAAATGACACA--TCACAAACATTCAGAATTTGACTCAGTAGTGAAGAACATTCTAATAGATAAATACTTGGTGTTGTTTGCCATCCAATTAATGCACTTTGCTAAAG-----------TCAAATTTTAAATGATTGAGGAAAATATTCCCAATTTTAGCATTTAATTTAATATGGTTATTTTAAAC chr4 - 94230402 52064222 52064221 52064763 42165640 42165639 42166181 542 ATCCTTGTGGTAAAGGAATACACCCTCCCCAGCACCAACGCCCTTTAC-TGTATTGCAGTGTTTAAATTTAGATATTTGAGG-CTCCCACTAGACAACAAGTTATTAAAACATCTGCCTTTCCATAAGCCGTTCTGTTCTTTGCCATTCCGCATGTCCTTTTCTACTTCACCAGGCAAAATTGCCCAATCTAAATTTCAGCTCAAGTGTTTGATGGCTTTCACGCTGAGCTCAAACTGTTAGTGCTTCCCTGAGAGAATAGAATTGAAACGAGATTTAATCTAAAATAACAAAATAGAATAAAGGTTTTACATATAAATAAGTAATGCCCTGTATATTTTTATGCACACTTTTCTTTTCTAGATTTTGCATGTAGTGAAGTTAAATCTTAAAATGCATAGATAACCCAAAGCTGAC-----AGAAAAGAGCAT-------------CAGTTGGCTGTATT-----CTCAATTAATGC-CTATCCTAAAGTATATTATAATTCAAATTCATAGTTACTATAAAACACATTGCAGAAAATAGTGTTTCTTTTGCTACCTTTGTCTCAGAC ..:...x::.....:...:..x::...::.....:--..x::.....x-.:...::x::x:...............:...::-.....:.....::...x:.............................:........:..........:.......................:.........................................:........................:.............................:..............................:.........................::..:.:...:.......x::......:..............:x....::..xx....xx:.x.--x..:.:.:.x:.x:..x:....-----..x:....:...-------------:.x....:xx.:..-----::..........-..x.x......-----------.......:xx.:.x.:.:x::..x.:...x.x:.xxx...::...xx...:x..:xx..:.:.:.:.. 35M2I11M1D33M1D309M2I22M5D12M13D14M5D12M1D11M11I68M 414/527 78.6% 542/94230402 0.0% 41/527 7.8% 129414410 60800145 +55578 chr4 + 190214555 181483880 181483879 181484981 1102 CTTTTCTCTGTAGTCAAAACTTGCCCTGATTCCTTACAGTTTTTTAGTCTATTTTCTATGCATAGAATACATATTTAAAGCAAAATGAAAGGTTCACAAACTTTAAGCTATTTTCAGTTTTACATTGTTTCAATGGCAGGATGAGTGTCTGCACATTTGATTTTTTTT------------AACTTTAAAACGATCTGACTTGTGCTAAGAACGCGGTTTGGTTTGTATTTCC-AGCCCTCGCATGTGTGCCTGCGTGTGTGTATTTTA-TCCCAGCTAGTTATAACCTGATAACCTGATTTCATACTGTGCTTTAACATAACAATACAGCCATCACACTAAAGCAACACAGTAAGCGGCCACATTAACCATCATTTTGCTTGATCACTCGGGAGAGATTAAATTTATTCATTTTTCCTATAGATAATCAAATATT-AAAACATGTTAAAGGAACTCTTG------------AGCTGTGACATGCTCATTGCCAAAACAATATCCTATATGTG----ATGTGTGACTCTTCCGGTGAGATATTTGGAGGAATTTTCATCAGATC-------TTTTTTCTTCTCATTTGCATCTGGTTTATCTAAAGTGAAATTCATTCAATTTTATTGAACTGTAATTCTAGTAATTTACAATATTTACATGCTGCGGTTAGATTGAAATCAGTCCTTAATTCAAATTCAATCTAAATTTACTGCATAGTAATTAGGGCTTTGTAACTGACACTAGAGGCCTATTGATTTAATGAAAAACTTAACCTTACAGTAAGTGTTTAATTAGTTGCTGCAGTAGATTCTGTTCTGTCCTAAATTGTGGACTTTAGAGAATCAGGTACTAATTTAAATTACACAACTATATAAAGATCAGAACTAATTTTTTTTTTA---CATGTAGCCTAACAGATGAATTAATTTCTTCCTCTTTGAAAAGGATAAGGGAAAGAGGCGGTAATGAAAGTAATTTCCTACCCTGCCTAATTTTATGTAAGGCCGGGCTAGCTATGCTGGAAATGATTACCTACCTCTGTTAAATATTGATATAAAGAGTT--ATGAAAATTAAAAGTCAAT-------GAGATTTCTTCAAGGATTATTTTGTAAATGG---AAAACTGAAACAATACACATATCTACTTA chr4 - 94230402 52067620 52067619 52068754 42161649 42161648 42162783 1135 CTTTTCTATGTAACCTAGA---------ATATTGCACAATTTT---ATTAATATCCTGTGGATACACTGCTTTTTTGAAGCTGAATGAAAG-TCCACAAACTTCCAATTATTTTCAGTTTTGCACTTGTTTGATTAGAGTGCTATTGTCTGTAAtttttccttttttttttttttttttGAATCTTCAAAGCACACGATTCATGCCTTGAAAACGAGTTGTTTTGTGTTTCCTAGCTCTGCGTTTTTTGTTTTTTTGGGTTTTTTTTAATCCCTGCCAGTTATAACCTGATAACCTGATTTCATACTGTGCTTTAGCACAACAATGCAGTCATCAAACTAAAGCAACACAGTAAGTGGGCACATTAGCCATCATTTTATTTGATCACTTGGGAGAGATTAAATTTATTCATTTTTGGAACAGATAATGAAATATTTAAAACATTTTAGAGTAAATCATGGCAGCATTCCGAAGTTCTGACATTTGCTTTCCCGAAGCACTATGCTATATACTGCACATACAAGACTCT--CGTGCAGATGTTTGG--GAAATTTCTGCAGTTTGTGGGGGTTTTTTTGGCTCATTTGCATTTTGTTTATCTAAAGTGAAATCCATTCAATTTTATTGAACTGTAATTCTGGTAATTTACAATATTTACATGCTGTGGTTAGATTGAAATCAGTCCTTAATTCAAATTCAATCTAAATTTACAGCATAGTAATTAGGGCTTTGTAACTGACACTAGGGGCCTATTGATTTAATGAAAAACTTAACCTTACAGTAAGTGTTTAATTAGTTGCTGCAGTTGATTCTGCGCTGTCCTAAATTGTGGACTTTAGAGAATTAGGTACTAATTTGAATTACATTACTATATAAAGATCAGAACTATTTTTTTTTAAAGAGCATGTAGCCCTACAGATGAATTAATTTCTG--TCTTTGAAAAAGATAACAGAAAAAGGCAGTAATGAAAGTAATTGCCTACCCTGCCTGAATTCAGGTAAAACCATGTTGACTGTCCTGGAAGTAGCTGCATACCTTGGTAAAATATTGAT-TTAAGAGTTTAAAAAAAAACCAGAATAAATAAAGTTAGAATTTTTTTCATGGAAAGTTTTTTAAGGAGATAAAACTTGAAATAATATATATGACTATATA .......x....::.x.:.---------..x::x:...:....---:.:x..x.:..:..x...x.x.:.x.x...:....x:........-.:.........:x.::.............:..:.xx..::..x:x..x::x.x......:.xx...xx:.......------------..::..x...xx.:x:..:.::...:xx...x:..:x...x.....:.....-...:..xxxx.x.x..::.x:x..x..x.x.....-....x..:......................................:..:......:...:.....x...................:..x.......:..........::.........:..........................xxx.:.......x.......-.......x...:..x..x..x..------------..:.x......x:x.x..x..:..:..x...x......::x----..:::x......--..xxx....:.....--...x....xx...x.:-------......:xx...........:.x..................:...........................:........................:..............................................x.................................:............................................................x.......:x............................:............:.......:x.....................x........xx.---.........:x..................x--..........:.....x:....:....:...............x............:.x..:.x....::..:x.:.::..:.x......:.:::.:.x.....:x..x..........-.x.......--.x:....x:x.:.:.x...-------..:x...:....x...xx:....x...:x:.---...x:.....:....:.:..:x...:x.. 19M9D15M3D45M1D76M12I52M1I35M1I166M1I23M12I41M4I12M2D15M2D16M7I330M3I30M2D119M1D9M2I19M7I31M3I29M 866/1082 80.0% 1135/94230402 0.0% 73/1082 6.7% 129416260 60798295 +18215 chr4 + 190214555 181496599 181496598 181496992 394 TAAAAAAAATCATAGTTTATCTGAATTCAACACATTTCGTTAGCATCGATTTACTATGGCGTGTGTTTGAAGGTACATGCAATATGCACGTGCCAAATGAATTCATTAA-GACCAGTGTGATTACGGTGAATGTCAAATGAATTAATAATAATGGGACCTCTAAGTGTTACCATTACTTTCACAGTGTGTTACTGTTTTTATACTTATGAGCCCTGAGGATAAATGACACTCACATATTACCCTTTTATATTAATTGTATCTGGATAATCAAAGGTTGGTCTAGCAACCTTGTGGGCAGTAACATTTTCTAGCTCCCTATACACAGAGAAATCACTATTATAAATTTCATTGAAGACTGATTTCATATTTTAGATTCCAATTATAAAAGGCATTT chr4 - 94230402 52080314 52080313 52080679 42149724 42149723 42150089 366 TAAAAAAAAAGGGAGAAAATTTCAATTCAAGACATC-AATTAACACTGATTTGCTATGGAATGTGTTCGAAAGTACATGCAATATTCACATGCCAAATGAATTCATTAAAGACCAGTGTGATTACAGTGAATGTCAAATGAATTAATAACAATGGGACCTTTAAGTGTTACCATTAATTTCACAGTGTGTTGCTG-TTTTATACTTATGGGCTCTGAAGCTAAATGACGCTCTGCAGTTGCCCTAGTAGATTAATTGTGCATTAATAATCTATGGGTGGGCTAGCAATCTGGTGGGCACTTACATTTCATTG--------ACACATGG--------ATTCTAAAGATCAT----------TTTCAT-TTCCAGTTTTCAGTCAGGAAAGTCATTT .........xx:x..xxx..:.x.......x....:-x:...:..::.....:......x:......:...:.............x...:...................-...............:.......................:..........:...............x..............:...-.............:..:....:.x........:...xxxx:..:....xx..x.........::x.x:......x.x..x...x.......:..x.......x.x......:x.x.--------.....x:.--------...x....xx....----------......-..::..x..:..:.:.x:....x..... 36M1D72M1I85M1D116M8D8M8D14M10D6M1D28M 293/365 80.3% 366/94230402 0.0% 30/365 8.2% 129416285 60798270 +92393 chr4 + 190214555 181507346 181507345 181508993 1648 CACGTGTGTCATCTGAAATTACATCACACCAACCAATGGCACACTATTAAATGCATGTAAATTCCCTGCCTTCCTCTTCAGAATCTGTTTACGAAACGATTCCTAAACACAGATGGAGCTTTTTCTGCCGGCACATATTAATTTGTGTTTTTATTTATGCACTTCTGATCTTTGTGACGTTTTGTCCTTTAGCCTGACACCAAGTCATTTTTTATACATGTCCTGTGGAAAGGTGGCCCTTGCCCTGCAGTCAGCCTCACAAATCCCTGACACACACGCATGCATTTTTTATTGTTCTCACATGTTGCTTAACAGCCTGCGTGATTACTGCTTTACAG-CACAGCAGATGGGTTCTTGAATAGCGGTGAAACAGATGAGATGCTCAAATCGATTGTTTTATCAACAATCAGTTGCAGATAAAAATCATTTTAATGAGAGAAATTAATGGTGTTTGCAAACATGATGTTAATTAAAGAACATTGCTTAGGCGGTTTTCTTCGCCTCTCTCTTTTTTTCTGCACACAACTTTTGGTTACCCGTGACATCTTTCATTATTGACTCATGCCCCAAAGAAAAGGCGATTAAAATCTGCTTTTGTTTGATGTAGCTTTTATTGAAGAAAGAAATAGATCTTTCTGAAGCTTCCTGGTGAGATGAAAGTCTAATTATCTCCACAAATGAAAGGAAAAGCTTTAATTAGGCCTGTGCTGAATCTGCGCACTGTGAATTTGTGCATTGTGATGGATGGAGCCCGCATCTCCTCCGTGACTGCCGTTGAAATAATGAAGGAAGAGGAGAGGTAGCTTACTCCCATGATTCAGCTGGCAGAGTGGAGTTGCAGGCACACCTGGGTTGTCAGCAAGTGCCCAGAGCAGCTGCCACGGGCCATGTTTCAGTGCTGTGCATTCGGCTGTTTTACAGCCTCCCTCTGAGCTTTGATCTCTTTTCAGACAGCAGGGGTCCTAACAAATCAAGCTTTTCATGTTTCACTCAGTTTCACTCTCTTTTGCTTCCCCATTCACACTGGAACTCCAAAGAGGATGGATAAAATATTGTCTTTTTCTGAAGCAATTAATGATCAGCAGCTGACATTATTGAAGTGGGTATGATGCCTTACAAGCAGTATTTTAAGGTTGACCATAGGGAGGATTCTGGGGAAAGAAATGAAT---TATTTATTTAACTTTTTAGTTGTTTACTTCGGTGTTTGTAATGCTATTAATCATTTGCACATGAGCTTTAATACGTACATACACTT-TTGGAAGTGTGCTGAACTGTCCGT-CGGCTCTGAAGGGTGACACTGT-GAATTATTTTAAACTGCTAATTGTCACATGGCAGAAAGCTAAA-AATACCAAATACGGCTGGATCCCCTGTTTTGT-----------CCCACTTTTGCCATGTTGAATGTAGCTTGGTCTATTTTCATGTCATCCCACTGATGCCAGGAAGGTCAAACTCTGACTTGATC-CGTCACTGCTTGATGTTAATCTATTCTTTTCAGTGAATCCAAAAGCACTTCTGACATCAAGAGTGACGATGGGGATTATTTCCAACACTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCAGGATTAAAAAAGAAGTTGGGAAGGGGGAAATGCTAACAAAATTGAG-CAGCACGTACAGGCAATTTGACCT chr4 - 94230402 52085393 52085392 52087018 42143385 42143384 42145010 1626 CATGTTTGTCATCTAATATTACATCACAGCAGCTCATGATGTGCTGTTAAATATGTCTGAAATCTC---CTTAATTTTCTGAGCCTGTTTAC-CAGCGCTTCCCAA-CACAGATGGAACCCTTTCTTCCTGCACATATTAATTCAT-TTGTTATTTATGCACTTCTGATCTTTCTGACATTTTGTCCTTTGGCCTGCTACCAAGTCATTTTTTATACATGTTCTGAGAAAAGGTGGCCCTTGCCCTGCAGTGAGCCTCGCAAATCCCTGACACACACATATGCATTTTTTATTGTTCTCACATGTTGCTCAACAGTCTGCATGATTCCTGCTTTACAGGCACAGCAGATGGGTTCCTGCATAGCGGTGAAGCAGATGAGATGTTCAAATCGATTGTTTTATCAACAATCAGTTGTAGATAAAAATCATTTTAATGAGAGAAATTAATGGTGTTTGCAAACATGATGTTAATTAAAGAACATAGCTTGGGCTTTTTTCCCTGCTT-----TTTCCCCCTGCACACAATTTTTG-TTACCCATGACATCTTTCATTATTGACTCATGCCCCAAAGAAAAGGCGATTAAAATCTGCTTTTGTTTGATGTAGCTTTTATTGAAGAAAGAAATAGATCTTTCTGAAGCTTCCTGGTGAGATGAAAGTCTAATTATCTCCACAAATGAAAGGAAAAGCTTTAATTAGGCCTGTGCTGAATCTGTGCACTGTGAATTTGTGCATTGTGATGGATGGAGCCCACATCTCCTCAGTGACTGTAGCTGAAATAATGAAGAAGGAGAAGAGGTAACCTGCTCCCATGATTCAGCTGGCAGAGCAGACTTGGAGGTACACCTGTGTTGTGGGAGCGTGCCCAGAGCAGCTGCCACAGGCCATGTTTCTGTGCAGTGCATTCGGCTGTTTTACAGCCTCCTCCTGAGCTTTGATCTCTTTTCAGACAGCAGGGGTCCTAACAAATCAAGCTTTTCATGTTTCACTCAGTTTCACTCTCTTTTGCTTCACCATTCATACTCGAACTCCAAAGAGGACGGCTGAAATATTGTCTTTTTCTGAAGCAATTAATGATCAGCAGCGGACATGACTGAAGTGGGTGTTATGCCTTTTGCAAGGTATTTTAAAGTTGTCTATAAGGTAATGGCTGAGAAAGAATCAGAATTGGTGTTTATGTATTTTGCCGTGTAATTAATTCACTATTTGTGCTTTTAACAA-CTTTTGTGCACTAACACTTAATTGGCTGTGCACTTCTTTGCAGTGCTATGA--TGCCTACACAGTTAGAAAAGGTGACATTCTAGGATAGCGTTTGGCTGCTAATGGCCCCCAGGGAGGAATCTGAATTATGACAAATAACGCACTATCCCAGATTTTATAACATCTTTCATCTATTTTGACCATGTTGCATGCAGCTTACTCTGTCTTCATGTAGTCCACCTGATATCACGAAGGTCAAACCACTGCTTATTCACGTCA---CTTGCAGCCAGCATATTCTTCTTTGTAAGTCATAAAGCACCTTTGACATCAAGGGCAGTCAAAGAGATTACCTC---------------------TCCACCTTTCTGGACACAATAGCAGTAGAAACAGGGGAGAAGTAATTGAAGACAAAGCTAAATCAGCATG----AGCAATCTAATCT ..:..x........:.x...........x..:.:x...:::::..:......:::.x.:..x..:.---...xx.:...x..::........-x.:..x....:..-..........:.::.....x..x.............::.-..x.......................x....:...........:.....x:.......................:...x.:.......................x......:..................::..............................:.....:....:.....x...........-................:..x...........:...........:...............................:..................................................................x....:...xx.....:::..:.-----...::::..........:.....-......:.................................................................................................................................................................................:....................................:.........x.......:x.:.............:.:...:.......:.:.:.......................::..x...x...:.......x.....x:.x:x....................:...........x....x..........................::.....................................................................................x.......:...x...............:..x.:.......................................x.....x.:..........:.x.......x::x:x:.........:....x.:...:..x::xxx...:.:..::.xxx....---.:.....x..x:..x:::xx.:x...x...:x.:.....:x.x:..x:..-.x....::..:x.:.x:.x.xx:.xx::.:.....-..x.x....:xx...--..:.:::-.:.:.xx:..:.......:.x.-.:..x::x..x::........x.:.x.xx..x..:..x..:..-x..:x......xx..xxx.....xx:....:.-----------:.:.:...x:........x...:.....:x...:.:.......x:...xx.....::..x...........:x:x:...:x..-.....---....xx.::.::x.......:.:x..:.:..xx.......:.:..........:.::::x.x:.:.....::..---------------------.::x::...:...x..x:..x:x.:x....::x...:..::.x..x..xx:.....::.:.:-.....:.----:.....:.:.:.. 66M3D23M1D13M1D39M1D191M1I165M5D23M1D637M3I50M1D35M1I15M2D7M1I22M1I43M1I32M11I83M1I5M3D74M21D62M1I7M4D13M 1297/1605 80.8% 1626/94230402 0.0% 64/1605 4.0% 129421953 60792602 +20621 chr4 + 190214555 181517960 181517959 181518433 474 TCCAAGCAAATCAGACGGAGGGATTAACACGTGTTGTGTAGTAATCTTGTTGTATTTGTGTTCATCTGTTCATCAAGGGAAAAAAAATA---GTCAATTTAAAGTGACATGGGAGTGGCAATCCCTGTCTTTA-GGCAACGGTTGTATAATTGACCTCCTTTAGCATTTAATTTCTCAAGCCTCTAGGAAGCTTAATTTTGAACATCAAAGAGGTACCTGTGGAAGAAACTGTTCCAGACTGGTGAGTAAACAAATTAGAGTTAATAGGGTCATTAGCTTTTGTGGTAAAAAATTTGGACTGGGTATTCCTCACTAACAGATATGTAAACTGTCAGCATGTGGGGTTTTTTTTTTTAACCCTTTAAAAATATAATTAGATTTAGAATTTGA--CAAGATGGTATATATTCT-TTGCTTAATGGCACTTCTTAGGTTTCGA------------------TAGGACTTGTTTTTTGTTGTTGTTGTTTGGTTTGGTTTGGT chr4 - 94230402 52093423 52093422 52093896 42136507 42136506 42136980 474 TCCTAGCAAACCTGTGGGAGAGCCTGACATGTTTTGC-----AATCATGCT---TTCACGTTCATCAGaaaaaaaaaaaaaaaaaaaaaaaaGTCATTTTAAAACAATGTGGGAGGGGTAGTTCTTATCTTTAAGGCAATGGTTGGGTAATTGACCTCCTTTGGCACTTAATTTCTCAAGCCTCTAGGAAGCTTAATTTTGAACATCAAAGAGGTACCTGTGGAAGAAACTGTTCCACACTGGTGAGTAAACAAATTAGAGTTAATAGGGTCATTAGCTTTTGTGGT-AAAATTTCAAACTGGGTATTCCTCACTAAGGAATG---GAAATGTCAA-------------TGTTTTTAAGTCTTCTAAAATATAATTAGACATGGAACTTGAATACAAATGTTACATATCTTATTAACAAACATCATTTTTTATACTTCGGCCATTATTTTATTAATATTAGAGATTACTTTTTTTTTTTTCTTTTTCTTCTGGTTCTGT ...x......:.x.xx....:.x:.:...:..x...:-----....x..:.---..:::.......x.xxx.xx..:::........x.---....x......:::.::......x..:.:.:.:.:......-.....:.....x:...............:...:......................................................................x.................................................-....x..:::...................x::..:---:..x.....:-------------.x.......x:...:x..............:x.:...:....--xx.:...x..:....::.-..:x:x..::x..:..:...x::....:------------------...::x..::.....x..x..x:.x...xx.:.....:x.. 37M5D9M3D35M3I41M1I153M1D35M3D10M13D42M2I18M1I28M18I41M 349/449 77.7% 474/94230402 0.0% 50/449 11.1% 129424537 60790018 +8217 chr4 + 190214555 181519029 181519028 181519255 227 GAGTAACAAAAAAAAT-----ATATGTTTAACTTAGGGAAAAAGCAAATATTTGCTAGCTTTGACAAAGGAGA-TTGTGGCAGCTATTTAGACTGGAAATCTGCAGCTGGGCAAGCACATCCAGTGGAAAACCACCTCCTAACTGTGAAAACTTA-TTGTACCAGCAGGATATGGGAAGTGACAACAACAATGAAAGCTAAGGCAAAAAAATAAAA-----GAAAAACAGAGTGAGGCA chr4 - 94230402 52094699 52094698 52094930 42135473 42135472 42135704 232 GACTAACTGGAGAGATCACAAACACATTTAACATAGAAGGAAATAAAATATTTTGTAGATGTGCCAAAATAGAACTGCAGAAAGTATTTAGACTGGAAAACTGCAGATGGGCAAGCACAACCAGTGGTAAACCTCCTCCTCACTGTGAAAACTGATTTGTATCAGCAGGGTCTG---AGTGAGAGCTACAGTGAATTCTA----CCAAAAATGGGAGGGTGGAGGAGAAGAGAAAGGCA ..x....x::.:.:..-----.:.::......x...::::...xx........xx...x.x..x....:x...-:..::.x.:x...............x......x............x.......x.....x......x............x.-.....:.......:.x..---.....x.:.x...:....xx...----xx......:::.-----..::.:x....x:..... 16M5I52M1I81M1I18M3D23M4D12M5I18M 164/220 74.5% 232/94230402 0.0% 19/220 8.6% 129424330 60790225 +13454 chr4 + 190214555 181520143 181520142 181521173 1031 CATCCTTAGAGAGATAAACTCTGAGAAGCCA-TAAAGGCCTTAAATTTACCACTTGTAAACAGCCTTATCATTTGATGTGGCACTGACACACCACTTCTGC---------ACA-GTACAGTAGCATCCTGCACCGTGGGAAGCC----GTGCCGCCCTGGCAGAAGGGAGA-AAATGCTGATGTGATTCCTTCTGCTGGATTGATGGCCTGAATTTTGGAATATTTCTGTCCAGGAGATACTGCTCTCACTCTTTCACCTTTGCAACT----GTCATGGGGTACCTGCGTGTGTGTGTGTATGTGTGTGTGTGCGTGCATGTGTACATATATCTCTAAGGAGATTGAAAGGCACATGACTGAAAGACAGTTTTGTAACAATTAGGCAAGTAACTATGCCTCAAACAAAACAAAACAAAATAAAACAAACAAAAAAACCTCTAGTTTTTGTAAGGAAATAACCACGAAAACCACTTAAATAGC-TTTGCCCAAGAAAGGAGCAAAGGTTTTCAGGAAATAAAAGAATAGCAGAGGTGAAAAAAAATCAATCCTGAAAGAAAAA------------GAAAAGTCTTTTCTTTTGAACA-GATGGA---------GCTTTCTCTTTCAGTATCTACCTAATGAAAATGAAGATATGGATAATATCAG-GCACCAAATGCAGGCTTTGGTGTAGACTCTTGTCTGTCCATGTTGA---ACGCTCAACAATTTCACGACCCCAGAAGTTCCA-AGCATCTGCATGTTTT-------ACCTGAATTAATCATGTGGCATAAAT-TAAAAGTAAATCATC-AATCATCATTAATTATCTGTTCCACTGATGCCTGCACTTTCTTACACTTTAATCTTCATTAACATCTAGAAAAGAGAAAATCCCAGAGGGCATGCCACATGTGTTCCTCTGTTGCGTGTAGGTCTCCCCAGAGCTCTCAGCCACTCAGCAATACAGCTCTCCTCAATGGGAAGCTGATACCA---------------CCAGGGCTTTTTCTCTGAATACTTCAGATTAAATCAAAAGGCTTAATTTGAGCAGCCATGGGCTAAAGCAAGATTCAGCTCTTTACATCTGA chr4 - 94230402 52096620 52096619 52097618 42132785 42132784 42133783 999 CATCCTTTGGAAAATTCATTGAAGGAAGCAACTGAAACTCCAAAATTGAGCAGTTTTAAACAGCTGTGAGATTTGAAGTTTTGCTTA-GTGCTGCCTCTGTTGAGGCATGACATGCATAATAGCAACTTACA-------AAGCCTGATGTGCTGTGTTAGCAGAAAGGAAAGAAATGATTGTGCTCTTTCTTCTG-TGGCTTTATAGTCTTATTTTTGGCATGTTTCTACCAGTAAGAAACTGCAGTCATAAATTCCATATTACAGCTCCTAGTAATAAGGCA---AAATGTGAAGATCAAC-----TGTATAGCAGAATGATGAAACAC--------GCAGCTCAAAAGGCA--TGGATGAAAGA------------------GCA---------GCCACAACTAAATTTGTACACACTGAGTTAAA---------------------------AGCAAATGCGAATCTGGCTACAATGGTATTTACCCCTTGGAAGAGTGATAGTAAT--GGTTAGCACAAAAAATCAAATGTAAGAGTAAAGCACTACTGCGTGGACAAAGGACTATTTTTGAAAAGCTGTGTGTTGTGAAAATGATGAAATGTTAATTGCTTTCCCTTGGTTTGTTT------------------TGTTGACAATTTGAGCACTCCAAAAGTTGCATTTCAAATGAACTTATGTCAGTGCATTTTGATGCATTTTGAACCTCTGGGCATCTTAGGAAGTTTAATAGTGTGTTGTTGTTTTTTTTTTTACCAGAATTAAAGTTGCAGTGTAAATCTGTATTTAAAAAATCTAGTCATCATTAATTATCTGTTAAACCGATACATGCACATTTTTATACTTCAATCTTCATTAACATGTAGGAAAGCAAATATGCCAGAGGATGTGCTGCATGTGTTGTCATGTTTTACTCATGTCTCTCTGGAATTCTTAACAGCTGAA-AATA-AGCT-TCTTCAGTGGGAAGTGCATGCAGTGTATGCCACTTTATCCAAGGTCCTTTATCCCAGTGTTTCAGATTCAATCAAAAGGCACAGTCTGAGCAGACATGGGCCAAAGCAAGATTCATCTATTTAAGTCTGA .......x.::.:..xx.:.xx::.....x.-.:..:x:.:x.....x.x..x..x........:x.:xx......x..xx::..x.-:::.::.:....:---------...-.:.:.:.....x.:.:..-------.....----....:.:x:.:......:...:.-.....x.x:..:xx..:......-...x..x..:.:..x.x......x..:.....::.x:x:...x.....xx...:xxx...xx:x..:..:..----..x..::..:.---:x:....x:x:.xx.:-----...:.:xxx.x...xxx.x.:.:--------.x..x.::.......--..:x.......------------------...---------...x...x:...x:x:x...x.x.:.:x:...---------------------------.::..x::....xx:x:..xx...:.:-...:...xxx::.:...::.x:..xx.--..xx.xx.x.:..x.x..:.x..:.:.:x...x..x.x...x:x.:.x..------------......::x.x.x..x....x.-....:.---------......:...xxxx.:.:.------------------.:.x..:...x.x..-:.x.....x.:x.xx...x:x:.::...:x....x..x...x....---.:x:.x...xx:.xx:.:x.::x:......:x.-..::.x.xxx......-------...x.......xxx..::.::.....-.:x.xx....xx...-.:...................xx..:...:.x.....x..:...:....:...............x...:....x:..x..x.......:::...::........x::x....x:::x:.x.....:.::..::...:.:.x:..x.:-....-....-..:...:.......:xx..:.x:---------------...:..:::...x..:x.:.::........x...........x:.:.:.......x.......:.............x..x....x:..... 31M1I55M1D13M9I3M1I18M7D5M4I23M1I23M1D72M4I11M3D16M5D23M8D15M2D11M18D3M9D32M27D27M1I27M2D50M12I22M1I6M9I19M18D15M1I46M3I33M1I16M7I26M1I15M1I148M1D4M1D4M1D23M15I92M 597/927 64.4% 999/94230402 0.0% 176/927 19.0% 129423523 60791032 +15980 chr4 + 190214555 181524490 181524489 181525026 537 TTTGATTAATCAGTTCCTAGCAGGTTTTAT--GCATTAAATTTACTTTTACAAAATCCAGAAGTTATTCTTATCTGTATCTCTCAGTTTGACTGATTAATTATCTATGGTTCCCCAGCACATACCATGATCACAGTAATGTTCTTTGGAGATATAATCATCAAAGAGCATCCCTTGGTTAGTGTGGTACATGAGAAGGGCATAAATAATGAAACAGAACA-GGGGCCATTAA--TCCGTTCTGTTTTGTTTTCTGTGCTTGGAGGTTGGTTTACCAGGTAGGGGGTAAAGAGTAGATGGGAAGTGAGGGGGAGGAAAAGAGGAAAGCCTATAGGTCAGAATTTTGCGCGGTTCCTTTCAGCCAGTCCCTCTCCTCGGACCACGCACCCTCAATCCCTGGCAAGTCTTGAAGGCTTAGAAGTTTTCATTGTGGTTTGCCAAGCTTTAAGTATGCACA-TGACTC-----------------TCACTGGGAGCTAAAAATGTATTTCCCTAACACCAGATGATTAGAAGAAATTGCTTGATTATACGACATTTATGGTTCAA chr4 - 94230402 52100189 52100188 52100704 42129699 42129698 42130214 516 TCTGAGCTGTCAATT--TGGCATTTTTCATAAGAACAAAATCAGTTTTTAAAAAGTCAGGAAGTGGCT-TTCTCTGTTTCTCTCTTTTTGATTGATTA----TCTACGGTTCCATAGCACATTACATGATCACAGCAATGTTCTTTGGAGATATAATCATCAAAGAGTATTACTCAGCTGGGGAAGTACATGTGAGGGATATAAATAATGAAACAGAACAGGGGGCCATTAAATATATTTTTTTTTTGTTTTCTGTGCTCGGAGGCTTGTTTACAAGGCAGGGGGTATGCTGTTTA---------------AAAAAAAAAAAAAAAT-----GGCAAGAATCTCAAAATGTAC----CAACCAGTCCATCTGTTCAGACTGGGAGCCCTGCAGACCTGGCAAACCTTAAAGGTTTATCAGTGTTCATTTTGGCTCTCAGAGGTGTGGGTATTCCCAGTGGCTCAGAAAGCTCTAGTTTATACACTAGGAGATACA--------CTCCCAAAACCAGATGTTT-----AATTTTTTAAATTATATGGTCCTTGTAATCGAA .:...x:x:...:..--.:...xx...:..--.x.:x....:x::.....x...:..x:.....x::.-..x.....x......xx.....:......----....:......x:.......xx...........:...............................:..:x..::.:.:.x.x:.......x..:..::....................-...........--x:xx..:.x................:.....:.x......x...:........x:xx..xx.---------------.::....:.::...::-----..:x.....:.::x:xx..x.----..:.......x...x:..:...::x.x:....xx.xx........::...:....:...xx...x......x...:.:x.x:..x.x.::....x.x..-..:...-----------------x....:....x..x.--------::..:..x........x..-----..x..x:.x:......:.::x:..:.::.:x.. 15M2D13M2I36M1D29M4D118M1I11M2I62M15D16M5D21M4D99M1I6M17I15M8D19M5D33M 352/493 71.4% 516/94230402 0.0% 67/493 13.6% 129424301 60790254 +10072 chr4 + 190214555 181530095 181530094 181530356 262 AAATGAAAGAGCACTTTTTAAAAAGTAACATTTTAAGTGTCAGAGAAGAGACATATTAAACTATTATTTCTTTCTCAGTGATCATAAAAAAACATGCATTCTGAAGTCAGGACAGTGAGATGCTTAAA-AGCCCTACATACAG--GGTAATAAATAAGATGAATGAATAATTGAAATTTTGCATTATGTGG-CACCAATAGATTAATTTTTACAAGGGAACTTATTTCAAGTAATGATCTTAGGAAGTGATCTCTCATTAGTAGCC chr4 - 94230402 52103218 52103217 52103473 42126930 42126929 42127185 256 AAATAAATGATTACATTTTTTACTGCTGCATCCAAAGTATGAAACTAAAG-TGCATTAAACT--TATTTATTTCT----GTACCCAGAGAAATATACTTT---AAAGAAGGGCAGCAAAATGACTAAATGGCCCTACACATAGTAGGTAATAAATAAGATGGATGAATAATTGAAATCTTATAGTATGTGGACATCAATAGATTAATTTTTACTAAGAGACTTATTTGCAGTAATGATTTTGGGAAGTAATCCCTCATCAGTAATC ....:..x..x:..x....xx.xx.:x:...::x....:.x.:.xx.:..-:::........--.....x.....----.xx.x:.:.:...:..:.x..---..:xx...:...::.:...x:....-:........:.:..--................:...............:..::.x.......-..:..................x.:.::........xx.........:..:......:...:.....:....::. 50M1D11M2D11M4D21M3D25M1I14M2I46M1I74M 187/252 74.2% 256/94230402 0.0% 14/252 5.6% 129426877 60787678 +22443 chr4 + 190214555 181544869 181544868 181545284 416 GAGGGAATTAGAGCTGACAAATGTTTTTG-CTTTTTCTTCCTGCA-TGAGAATATGAAGTTTTAAATGATATGCAGCTAGAAGCAGATGAAATTATAGCTCTCAGACACTTTATAATTCTGAAACAGATATTTGATTGATTGCAAGGTGGCATCGCTGCTGGCAGTTTTTTGTCGGCACATTTTGATGATAGTTTCTTAGGTGAACTTCAAGTACATCAGTGACACACACTCCGTTTCAGATACATTGAATGATTTTGAAGCTAATAATTTATGAGAGCTTTTGGAGCAAGTTATTAGGTTTGAGTCAAGAGAGATTTAT------TTTGTTTAATCCTAGGTTCCTTGTTGTGTGTTCTGTTTATCTCATCTGATTTTGCTAGTAAACAAATATGTAAAACTTTAATGTGGATTTTTTCCCCT chr4 - 94230402 52106550 52106549 52106956 42123447 42123446 42123853 407 GAGGGAAACAAAACTAA-AATTGTGTCAGTCTTTTTCTTTCCTCACTAAGAGTATGAAGATTAAAACG-TATGCGGC-AGAAGCAGATGAAATTACA-TTCTATGACACTTTATAACTCTGAACCAGATACGTGATTGATTGCAAGGTGGCATAGCTGCTGGCATTTTTTTGTCTACA-------------GTTTCTTAGATGAACTTCAAGTACATCAGTGACACATACAATGTTTCAGACACTTTGAATGATTTCAAAGATAATAATTTATGAGAGCTTTTGGAGCCAGTTATTGGGTTTGTCTCAGGAGAGACTGATTTATTATTTTTTTAATCTTCAGTTCCTCATTGTATGTTCTGTTTATCTCATCTTATTTTGCTAGAAAACAAATACATAGAACTTTAATCAGAAGTGTCTGCTCT .......x:.:.:..:.-..x...x.:x.-.........:.:x..-.:...:.......x..x...:.-.....:..-.................:.-:...xx............:......x......:x.....................x..........x.........x:..-------------.........:..........................:..xx:........:..x...........::...x..........................x.......:......xx...:......:.x..------...x.......:.x:......::....:...................x..........x.........::..:.........xx.:.x.x.:.x.:.. 17M1D11M1I15M1I22M1D8M1D19M1D80M13D129M6I98M 332/399 83.2% 407/94230402 0.0% 25/399 6.3% 129438319 60776236 +13273 chr4 + 190214555 181551389 181551388 181551807 419 ATGGCACATTCACA--TAATGTTTAACGTGGGCTGCTACTTAGGTCTTCCTGGAAATGTTGTCATCCTTTTTGATCACACTAATAATACACTATGAAGCGTTGCTCTGTGGGATGTAGTTAAAGCTTATTTGAGCTTCGGCAACCACTGGCACTTTTCCTGGGGGAAAATATCAGAACATTTTTATTTTTATCTCAATCACTCCAGAAAACTTCATGGAGAATAGCCTCTGTCAGGGATATAGGGCAATCGTTGTCACAAACAGTGTTTGAAAA---GAGATGGCCTAAAT-CGTCAATATACTGTGCTGGGAAATGGGAAATGGTGAATAAAAAGGTTCAACAGTAAATGTCTAAACTTTCTTTGAACCAGAATTGCTGAGGTTTTATTTGTTATTTTGTATTTTGCAAAATAGGCAGTTAATA chr4 - 94230402 52109109 52109108 52109494 42120909 42120908 42121294 386 ATGACAAATATACAAGCGGTGCTTAACATTGGATAGTGCTCTGCTCTTC------ATACTAACATTCTTTTTGATCATGCTAATAATACACTATGAAGCATCACTCTGTTGGATGCAGTTAAAGCCTATTTAAGCCAAAGAAACAACTTGCAC-TCACCCAGGGGAAAATATCAGAACGTTTTTATTTTTACCTCAATCACTCCAGAAAATTTCATGACAGATGATCTTAGCCACTGTTGCAAGGAAATTGCTGCCACCAGTA-TGCCTGGAAAAATGGGAGAGAATGAATGAGTAAATATGTTGC---------TGAAATATACTGAAT-----GATTCAGAATTAAATGCTTCAGGCTTACTTGAGCTTCAGTTGAAGAAGATTTA-----------------TGCAAATCGGGCAGTTAACA ...:..x..x:...--:::..:.....:.x..x.:x.:..:x.x.....------..::.:x...:...........::....................:.::......x.....:.........:.....:...:xx:.x...x...x....-.:x..::.................:............:..................:......:x::..:::..:x.:..xx.x.::.:..x...:.:..:...x.::.-..::..:...---.:..x:.xx.:...-x..x.....::..:---------..::.x..:x.....-----.:....:x.x......::.x.:x:..x:....:.:xx.:...xx..:.x....-----------------......x::.........:. 14M2I33M6D98M1D109M1D10M3I14M1I14M9D15M5D53M17D20M 268/380 70.5% 386/94230402 0.0% 45/380 11.8% 129442280 60772275 +3100 chr4 + 190214555 181551803 181551802 181551863 61 TAATAATATATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704277 19704276 19704337 74526066 74526065 74526126 61 TAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...xx.:.......::.......x.:.:.....x:...............x:.x.xx.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 161847526 28367029 +3083 chr4 + 190214555 181551808 181551807 181551884 77 ATATATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 71630146 71630145 71630222 22600181 22600180 22600257 77 ATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGTCTTCCTGAATTTCTGTG .....:.:.:.:.x.....:....x.x.:....::.....x..::....x:.:.......x.x:x..x:.x.x.... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 109921662 80292893 +3287 chr4 + 190214555 181551812 181551811 181551875 64 ATATATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x...:.......::...:...x.....:...x::..............x:.x.xx.... 64M 48/64 75.0% 64/94230402 0.0% 0/64 0.0% 161847538 28367017 +3427 chr4 + 190214555 181551816 181551815 181551879 64 ATATATATATATATATATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704274 19704273 19704337 74526066 74526065 74526129 64 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..x..x...:.......:......:.x.....:...x::..............x:.x.xx.... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 161847542 28367013 +3012 chr4 + 190214555 181553299 181553298 181553354 56 AGTGTGTGTGTATGTGTATGCGTATATATATATATATACACACACACACACACATA chr4 - 94230402 14964824 14964823 14964879 79265524 79265523 79265579 56 AATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACA .:.:...x..::....:.::...:...:......:.xx........::......:. 56M 40/56 71.4% 56/94230402 0.0% 0/56 0.0% 166588475 23626080 +3019 chr4 + 190214555 181553325 181553324 181553364 40 TATATATATATACACACACACACACACATATGTGTAATAT chr4 - 94230402 21704674 21704673 21704713 72525690 72525689 72525729 40 TATATATATGTACACACACACACACACACGTGTATAAAAT .........:..................::...:...x.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 159848651 30365904 +3019 chr4 + 190214555 181553325 181553324 181553364 40 TATATATATATACACACACACACACACATATGTGTAATAT chr4 - 94230402 21701101 21701100 21701140 72529263 72529262 72529302 40 TATATATATGTACACACACACACACACACGTGTATAAAAT .........:..................::...:...x.. 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 159852224 30362331 +3435 chr4 + 190214555 181570524 181570523 181570623 100 TGAACGAAGGAAAGAAAGAAAGAAAAGAGAGAGAGAAAAAA----AAGAAAGGAAAAGAGAGAAAAAGAAAGAAAAAGAGAGGAAGGAAGAAAGAGAAAGAAAG chr4 - 94230402 53683453 53683452 53683553 40546850 40546849 40546950 101 TGAACAAA---AAGAAAAACAAGAACTGGAGGGAATCAAAATCCAAAGGAAGGAGAAAACAGAAAGAGAAATCAATAAGAAGCAAGGAAGCAAGAGATTGGAAG .....:..---......:.x.::..xx:...:..:xx....----...:.....:..:.x.....:.....xx..x.:::..x.......x......xx.:... 8M3D30M4I59M 69/97 71.1% 101/94230402 0.0% 7/97 7.2% 127887071 62327484 +3285 chr4 + 190214555 181570548 181570547 181570661 114 AAGAGAGAGAGAAAAAAAAGAAAGGAAAAGAGAGAAAAAGAAAGAAAAAGAGAGGAAGGAAGAAAGAGAAAGAAAGAAAGGAAAGAAAGAGAGAGAGAGAAAGAAGGAAAGCAA chr4 - 94230402 55334390 55334389 55334503 38895900 38895899 38896013 114 AGAAGATGGATAAGGAGTAACCAGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAGGTGATGCAA .::...x:..x..::.:x.:xx..:.:.:...:..:..:x..x:x.x...::...........x.x......:..:...::..x.:::x.x:::.::.:.:...:.x:.x.... 114M 66/114 57.9% 114/94230402 0.0% 0/114 0.0% 126236158 63978397 +3226 chr4 + 190214555 181582631 181582630 181582718 88 AGTGAGACTCCCATCTCAAAAAACAAAGCAAAACAAATCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAACTCCTTTGC chr4 - 94230402 58028601 58028600 58028688 36201715 36201714 36201802 88 AGTGAAACTCAGATTTCAGAGAACACAGCAACATAGGAAGGTAAAAAAAAAAAAAAAAAAGCAATAGGCAAGAGGACCATCTCATTGC .....:....xx..:...:.:....x.....x.:.::xx::x..............:....x..x.::x:.:.:..xx.:::.x.... 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 123554030 66660525 +3080 chr4 + 190214555 181582641 181582640 181582702 62 CCATCTCAAAAAACAAAGCAAAACAAATCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAA chr4 - 94230402 14958631 14958630 14958692 79271711 79271710 79271772 62 CCCTCTTAAAAAACAAAACAAAACAAAAACCTAGGAAAAAAAAAAGGATAGAAATGGAGGAA ..x...:..........:.........xxxxx.::..........:..x.....x::.:... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 166624010 23590545 +3046 chr4 + 190214555 181582643 181582642 181582709 67 ATCTCAAAAAACAAAGCAAAACAAATCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAA chr4 - 94230402 25255647 25255646 25255713 68974690 68974689 68974756 67 ATATAAGAAAACTGAACAGAGGAAGGCACAAAAAAAAAAAAAAAAAAAGGGACTGAAGAACAGAAAA ..x.x.:.....x:.:..:.:x..:x..x...............:....::.xx:.....x...... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 156326996 33887559 +3082 chr4 + 190214555 181582649 181582648 181582698 50 AAAAACAAAGCAAAACAAATCAAAAAAAAAAAAAAAAAGAAAGAAAGAAA chr4 - 94230402 38540320 38540319 38540369 55690034 55690033 55690083 50 AAAAACAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAA .........:.........:x.:x...x..........xx...:...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 143042329 47172226 +13722 chr4 + 190214555 181585086 181585085 181586027 942 ACTAACTGCCTTTGTGAC---TTTTCCTTGTAGGTAAGAAAAGTGCAGAACTTGGCAACTAA-ACATGCATATTTCAACTAAAAAAA---AAATTACTTTAGGAGCCATGGAGCACCTTGTACTTGATTCACAGATGGACCGATTTTTTAAAAATC-ATTATAATTTACAG--TTCTCAACAATATGAGACCACATTAAGTATGCAGAGAAAACAAATGCAGCCTCTGAATTTAATCCTAGTCTGCGTTATCTCTTACGTGTTGTTCTTATTTGTATATCGCAGCCTGAAGCTTTTGACATTGT----ACATTCATCGGTCAGGAAAAATGTTTGGAGGAAAGGGATCAGAAAGACCAACAAGAAAATTCACTGAACTACTGAGACTTGTAGGTTGATTTAAGTAGTGAGAAAA-----CTGTATTTTAAATGTGATGATATACTAAAAAATGAGACTATTT----AGCATTGTACTTTCCCTCCGGCAAGGCAAAAGGGCACTTGGTCTCGTGTTTTCATTTCTTTTCTTTTTAAAATTATTATTTAA-GCAGGACAAAAATAATGTAATGCAGAAAAAATGTCATTAACTCTAGAAAACTAAATAGCAAATGAGGCCATTTCAATCACATGCCTAAGATTCTTTTAATCAAGCATTTGTTGTCAGCAGGACCATATATTTGGCCTCTATAATCGACTCTCAACCAAAAAGTGAAAGAAACCTTTATTTCACTTCTTTATATATTCTGCTTCCTCCATATACTTTTCTTCCTATTAATTTAAACAGGAGGGTCCCATAGCTTGGATTTCT---TTCAGTGAGGTTTTCTATGTCCAGTTTTGTCACTGCTTTGGCTGAAATCCACAGAGGCTAGGGGACCTGCATCAGGTAGCCTAGAGCGTTGGAGGCTCAGTAATAATTCTAATTCAAGAAAACCGTGGCTTCCAGCT-TTTGCTTTAATCATTAGA chr4 - 94230402 52121331 52121330 52122204 42108199 42108198 42109072 874 ATTTACTGCATCTATAATATTTTTTACATGCTGGCAGAAAAAATACC-AACTGAGTAGCCCATACGTGTATATTTTGTCTATTTTAATTTGCAGCGTTTTA--ATCCTCAGAGCAGCTC--ACTTTTTCTTCCAGTAGACTAAATA---AGAAATCTATGATTACTTACAGAGTCCTTAACAATGGGAGACTCTATTAAGCATGCAGAGAAAACAAATGCAGCCCATGAATTTAATTCTAGTTTTCATTATC-------------TTTTATTTGTGTATCACACCCTAAAGCTGTCGATTGTATTCTCATATTCATCTTTTCAG--CAGTGTTTGGAAGCAGAG------------------GGGAATTCACAGAACAACTCAG--TTGTTACTTCATTTTAT--GTGAGAAGAAATCCCTATAATTTTAAAATGAGAAAGTCTTGGGTTACTAATATATTTTTAGAGCATT----TTTCACTCTGGGAA--------GGTCCTTGTTCCTGACCGCCAATTAGT----------AGATTATTATTAAATACAGTAAATATTTTATGTGTGGC----AAAATACCATTAAACTGAGAAATCTCAGTAACAACTGAACCTACTTCAGTGTAATGTCTCAAATAGCATTAAG-AAATATTCCTTGTTAGCATGGTGGTGTATTTGGCCTCTGT--TCAACCTCTTGCAAACCATT--AAGAATGCTTTTTTCCCCTCCTTTATATGGTCTCCTTCTTACAT----TATTTTTCCTGTTTACCCAAGAGATAGCTTGACATAGATGCAGCATCTGGCTTCTCTGAGGTCCTGCTTTTTGCGTTTTTAAGCTGGATTGACTGAAGCAAAGGGAAGCTGAATGACTTGCCTGAGGT---------------TGGCTCAGTGGGGATTAGAA-CCAAGAATCCCCTTGCCCACAGCTGTTTGCTCTGAACAGTAAA .:.x.....x.:.:.:.:---....x.x..:x..:.::....:.:.x-....x:.:.:.:x.-..:..:......::x...xxxx..---:x.x:::....--.x..x::.....x..:--....xx.::x.x::.:...::.x.x---.:.....-..x..x.:......--.:..:......:x.....:x:......:.......................:x..........:.....:.x.:.....-------------.:........:....:..x...:.....x.:..:xx.:.----.:.......xx.:x:.--x.:........:.x.::.------------------.::.......x....x...x..--....x:x..x....x.x--.......:.-----..:..x...x..x:...x:.x:.x:.:::xx.:x.:xx.....----......----....x...:..x..--------..:x....x..::.xx:x::x...xx.----------.:.........x..-:...x.x.x.xx.x....:xx..----.....::......x::x.....x..x.:..:...x...:x.:.:....:.xxx...:..x.:..xx:x....x-..::...:x....:....x.::x:.:............:.--..:..::::x:.x..xx.x.--.....xx....x..:.x..:........:x...x....:.x...----.x..:.....:..x.:::..:x::x..xx.xx.....x.xx:::x...---...xx......::.x:x.x.:xx.....xxx:...xx...:.....::xx.x:..:...:::x...:...x.x....---------------x........::x:...xx..-:......xx..x.x..::x.....-......:.:.x..x..:. 18M3I26M1D14M1I24M3I11M2D16M2D25M3D7M1I14M2I79M13D39M4I16M2D18M18D22M2D17M2D9M5I43M4I6M4D14M8D27M10D14M1I23M4D73M1D40M2D20M2D44M4D48M3I77M15D20M1D24M1I18M 550/846 65.0% 874/94230402 0.0% 124/846 14.7% 129463755 60750800 +3003 chr4 + 190214555 181586834 181586833 181586885 52 TGTCTCAAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAACAAAA chr4 - 94230402 54395887 54395886 54395938 39834465 39834464 39834516 52 TATCTAAAAAGCAAAGCAAAACAAACAAACAAAAAAACCCAACAACACAAAA .:...x....:....:.................x....xx.xx..x...... 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 127190947 63023608 +3228 chr4 + 190214555 181586834 181586833 181586884 51 TGTCTCAAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAACAAA chr4 - 94230402 4299054 4299053 4299104 89931299 89931298 89931349 51 TGCCTCAAAAACACAGGAATACAACAAAACAAACAAACAAACAAAAAAAAA ..:..........x.:x..x....xx.....................x... 51M 43/51 84.3% 51/94230402 0.0% 0/51 0.0% 177287780 12926775 +3003 chr4 + 190214555 181586838 181586837 181586881 44 TCAAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAAC chr4 - 94230402 15215971 15215970 15216014 79014389 79014388 79014432 44 TTAAAAACAAAACAAAACAAGCAAACAAAAAAAAACCCAAAAAC .:..................:........x...x.xx....... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 166370867 23843688 +3272 chr4 + 190214555 181586840 181586839 181586937 98 AAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAACAAAAGAAGCAGATCATTATTTTTTTCTTAAAAGAAATTTCTTAACAAAGAATATTA chr4 - 94230402 38540320 38540319 38540406 55689997 55689996 55690083 87 AAAAACAAAACAAAACAAACAAGCAAACA---AAAAAAAAATCAAGGAAGAA----ATTATCTGGATCTCAGTAAAA----CTTACTGGAACATATTA ......................:......---...x.....:x..:....x.----.....:.xxx...:.:x.:..----....x:::.:x...... 29M3D20M4D21M4D17M 67/87 77.0% 87/94230402 0.0% 11/87 12.6% 143046520 47168035 +3241 chr4 + 190214555 181586840 181586839 181586896 57 AAAAACAAAACAAAACAAACAAACAAACAAACAAACAAAAACAAAAGAAGCAGATCA chr4 - 94230402 68654350 68654349 68654406 25575997 25575996 25576053 57 AAAAACAAAACAAAACCAACCAACAAACAAACAAACCAAAAACCAGAAAGTGGCCCA ................x...x...............x....xxx.::...::.x:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 112932490 77282065 +3513 chr4 + 190214555 181605472 181605471 181605555 84 GAGAAACAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA .........xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 84M 56/84 66.7% 84/94230402 0.0% 0/84 0.0% 144747179 45467376 +3091 chr4 + 190214555 181605476 181605475 181605567 92 AACAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858285 36858284 36858376 57372027 57372026 57372118 92 AACAATATGAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ....:x:x:.....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 92M 57/92 62.0% 92/94230402 0.0% 0/92 0.0% 144747191 45467364 +3157 chr4 + 190214555 181605480 181605479 181605563 84 GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA chr4 - 94230402 36858293 36858292 36858376 57372027 57372026 57372110 84 GAGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ......x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 144747187 45467368 +3441 chr4 + 190214555 181605486 181605485 181605590 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:...x..::.......:::..x... 105M 66/105 62.9% 105/94230402 0.0% 0/105 0.0% 120270785 69943770 +3157 chr4 + 190214555 181605489 181605488 181605572 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.......:.. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 144747195 45467360 +3441 chr4 + 190214555 181605490 181605489 181605594 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..:..:.:.x..:.......:::...x... 105M 66/105 62.9% 105/94230402 0.0% 0/105 0.0% 120270789 69943766 +3035 chr4 + 190214555 181605493 181605492 181605576 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.....:.:.. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 144747199 45467356 +3057 chr4 + 190214555 181605494 181605493 181605598 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..::.:.:.x..:...:..::::...x... 105M 63/105 60.0% 105/94230402 0.0% 0/105 0.0% 120270793 69943762 +3035 chr4 + 190214555 181605497 181605496 181605580 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x..::.x..::.:...:.... 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 144747203 45467352 +3188 chr4 + 190214555 181605498 181605497 181605602 105 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGA chr4 - 94230402 61334701 61334700 61334805 32895598 32895597 32895702 105 GAAAGAGAGAAACAAAGAATGGTAGAGAAAGGTGAGGAGACGCTGACAGAACCAGCAGAAAATACAGAGAATGATAGGAAAAAATAGGAAGAAAGAGGAGACAGA ......:.....x......x.:x...:.:.::x:.:..:.x:xx..x....xx.:x::..:.x.x.:....x..x..::...:.x.....::..::::...x... 105M 64/105 61.0% 105/94230402 0.0% 0/105 0.0% 120270797 69943758 +3019 chr4 + 190214555 181605541 181605540 181605630 90 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAACAAGCA chr4 - 94230402 36858294 36858293 36858383 57372020 57372019 57372109 90 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAGCCAGCA .....x.:xx..x.....x...::...:...:...:...x.:x:.xx.:.::..:.:::..:.x:::::x...........:.:.x.... 90M 55/90 61.1% 90/94230402 0.0% 0/90 0.0% 144747247 45467308 +3033 chr4 + 190214555 181605560 181605559 181605616 57 AAGAAAGAAAGAGAGAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA chr4 - 94230402 396746 396745 396802 93833601 93833600 93833657 57 AAGAAAGAGAGAGAAACTAATAAGGGAAAGAAATCATGAGAAGAAAAAAAAAAGAAA ........:.....:.xx..x..:.........xx.x..:.::..:...:....... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 181208814 9005741 +13350 chr4 + 190214555 181608281 181608280 181608910 630 AACATGCATAATTTGAAAATAATTTGAGGAATTTGCATTGTTTTGACAAATTGAAATCTGCCCCTCTCCAAGAGGTTCCAGG-AGACCAGATGGTCGTGCAGTGTATTGGAGGGGGTCCAAAGTTGCTTTTGTGTTCATTGATGTAGTGTGCTAAGAAAGGTCTCTGGGGAA--AAGTATCCCCAGGTAGTTGATTGCTTTGGAGTTCCAGCAGAGAGTAACTGTGTC--ATATGAGAAAGGAAACAGAAGTTATTGAGAACTAATGCCTTGGA-TTGGACCGGCTAATTTTATCACTGGAAATTCAGGAAAATATTT-CAAAAAATATCAGAAAGGTATTTCTGAGACAGGGAGAGGAATTGGTAAAGAACTGAAGTAAATTAGCAGCATACAGACCCAGTCTGACTTCCCTTTGGTGTGTAGAAGATCCTTGAATGTTATCAAGTGC-GTATGAAGCTGTGTCAAGGGGTTCAAGGGCTTTGCTTTTTAATTTTAAAGTGCTGACCCTAATCAGCTGAGCGAGGAAAGGTAGTTGATTGGGATGGAGCCTGACATTGGAAAAGCTTAGCATCTCTTCAAAAAGCATGTGC---TATTTAATTGGAACATTCACACCCGCTAATAGTAGCTGTTTAAAAT chr4 - 94230402 52123942 52123941 52124525 42105878 42105877 42106461 584 AACATGTCTAATTGGTAAATAATTTAGTAAATTAGCATCATTCTGACCAATTCAAGTCTACTCCAGCTTGTGAGGCTTAAGGGAGACCAGATGG-AGGGTAGTGAATTGGAAGTTATCCAAAATTGCTTTTGAGTTAATTGATATAGTG---GAGGGGAGATCTCTGGAGAAGTATATATCCCCAGGTAGTTGATTGCTTTGGAATTCCAACAGAGAAGAAATGTGTCAAAAATGAGAAGGGAAACATAAGTTACAGTGTGGTTATATCCAAGACTTGGACCAGTGAATT-------------TCTAGGCAAGCATGCATGAAAAATATTGAATAATTGTTCTAAAGAAGGAACCAGTACTTGTGTTAGAACTGAAGTGAATTG--AGGAAATAG-------CTTATTTACCTTCTGTATGTCATGTATTTACACATTATATC---TGCGGTATGTTAGTGTATAGAAGAAGT--AGAATATTCCTTTTTAACTTGAACCTGTGAATTTTCATCAAAATGGCACTG--GTGTAGCTGCT--------AACCATACATTG-------TTACATTCTGCTAAATGAGAGTGTCCATGTACTAAATTGGAACTCTCAC---------CGGAGGTTGTTTAAAAT ......:x.....x.x.........::x:....x....::..:....x....x..:...:.:..xx::::x....:.:x...-...........-x.x.:....x......:.xx:......:.........x...x......:.....---x.:.::..:.......:...--.x:...........................:.....:......:x..x......--.x.......:.......x......:x.x.x:x.x..::.:x:..-.......:.:x....-------------.::...x..::..x:-::........:::.x.:x.:..::x:...x:.::xx..x.x...xxxx...........:....:--..x.x.:..-------..x.:..x....:x..:...x:x:x..::x::x..xx....---...-.....xx:x...:.x:.:.::x.--..:::x..x........:..x..xx..:x:.:::.x....:xxx:..:xx.--:x....:..x.--------.:..xx......-------...xxx...x:.x..x:..x:...x.---..:.x.........x:....---------::.x:.:.......... 82M1I11M1D54M3D20M2I54M2I44M1I15M13D15M1I65M2D9M7D41M3D3M1I23M2D51M2D11M8D12M7D26M3I20M9D17M 385/573 67.2% 584/94230402 0.0% 68/573 11.9% 129484339 60730216 +101623 chr4 + 190214555 181609432 181609431 181612751 3320 TCTCTTTTAGACTTTTTCACTTAGTGTTCTTACCATTAGGAGAACAGT-TGTCTGACCTTTTTCTAGGAGGTTAATAAAGAATGCACAGCCCCATGAGCCTGATTCAATTTCCTTTATGTGAACACGCTGCATAAGTGACCATTATA---TTTGTCTGCTTCTCCGTGCTTCGTTCCATAGTTCCCAGCCTTTTATATGAATGACCACATATGTTGTGCATTTGGCCACATCAGGTGAGA-AAAAGCAAAATAGATTTTCTTGAGCATTCAATCCAGTTTCCACACAATGGGCTCTCTAATGTGGATTTGAAATGTATCTGGTCATATATTATTTAACTGCATTGTATTTTGTGTTTTAAAAATTTCCA--CCACATATTCGATTTTAACAAATGTATGAGGCGCTGCAATATTTGAGCTCTATATTTTAGAAATTCCACACTTTCAACAGATTCTTCAGACTTCAAAGAATTTAATATTAGTACCATAAAAGGTCTTTTGAAGAATAATACTGGAACATAAGAAAAACGACTGCCTGAGTGTACCCTATCATTTAGAAAGTGTTTTATTGCTTTAATTTCCTGTCTTCGTAAAGTAACAAGCAGCACAATAGAAGATATATTGTTACAGAGTTTGCAATTTATTAGAAGGCTTGAGCAAGTTGAAGACTTTATGTGAAGTGAAAAAGAAAACCTCTATTTCGCTGAAAAATGGAGACGA---ACCACATCAATGTTGCAGCAGCTTTAAATGGAGTCCCCTTTTTGACTGATAAGTTGTCTCTACACACCCTGTATGTTTGCATGAAATAAATCTATGGGCACAATCCTCATTTTGGGCTAGCTGTGTGTCATTAGGTTCCTAGAAACCTAATGTTATTTCATTTGTGAGGCGTGTATAAGATGACTGTTGCTATTTGGATTCTATAGCACAAAGGTGCCATTAAAGCAGAAATGACCCATAACATACATTTCCATTCATTTATTACATTTTTTGCATGCGTGACTGAATTTTAATCCCGGGTTTTGTCAACCTAGTGCA-------GTTACATCGAGCT---TTTTAGCATAGTTTCATGTACCTCAGTTCACTGTCTTTTACACAGAGGCGTAAAAGCATTAAAAAGGAAGATATTTATCCCACTGAAG-TACAGAGACAATTCATTTCTGCA-CCAAAAATTGTAGAAATGAGTGATGTGACACAATGACTAACCTGTAAAAATAAAGTTGAAAAATTACCTCATAAATA--------ACTTCAGAGAAGGGGGAAGCAGGATATTTAACAAGTCTGGGGGGTGGTGTGTGTGTGTCTGTGTGTGGCTTTTCTTTAATAACACGGTAGGTACTCAGATGAGCGGACATCAAGCAGCCC-TCTGGAATGGAAGCTACCTGTTTATCAGGGCAGAACAAGAAGTATAAGAATCACAGGTGCTCCTTAATCCCACCACTGTTCTCCGACCAAAAGATTGCAAAACATCTGTTCCTAACAGATTGTTTAGTTTTTCTACTAAATAAATCAAAGTGGGAAATATTACCATGTGGAAAGCCACTGGAAAAGACCCAAAGGTCAACTGACCTCAAGTTTGTTAGTT--CCAATGATTTTAGCCAAAT---TAGTAGGTTTCACAAGTCAGAGAGTTATCTTTATC-----ACTCTTGATTA----TATTTTGGATGCATGCTAAGGAACATGTTGTGCCAT----------GTTAATTACCTAAATTCAT------------TGACTGATGGATTTAAATTAGTACACCTAAGCGTCATAGCTGCAGTACTTGTAGGC----GAACGTGGGAGAGCCCAGACGTTTCTGGTTTTCTCCGTTATCTATGTTTATCTTTGGAAGAATAATTATTTCCAAGCTTTATTGCTAACTGAAGCACAAAAGATATCCTCTGGGCGTGCCGCAGACAATCCTCAGGCACATTAGAGGAGTCATCTAGAGTTAGTTCAAAGTGAATTACTTTATTTTAATCATGGTGACTTTACCGACTGTGTCAATACCCTGTCCCGTCATGTTGTCAGACTTTTATTCCTCCTCTTCTGCGTTTTTTCTTTTTTCCTTTCTCCTCTTTACATGATAC-CCAGGCCACTTTATTTTAAGGCATATTTTTTAGTCTATTCAAGATTTACGGATAGAATGGCACTTCAAAATGACTC---GTCTTGTATTACACGATACGGAGTCTGTTTG-----GTAACTCTTTTTCCTCCA---AATCCTTGGCTAAAATCTGTGGACAATGCTTTATTTTTTTAAACAACCACGTGAGTACTTAATGTGAGGCATTTGACAATTATAGAGTTATAATGAGTGCAAACTTTAAAATGCAAATA--AAATGCTGCACTCAGGGCTACTAGAGATTAAATATTTACTTCATCCTCACTAATTCACAAACAGGAAGCCAGGGTACAGAAG------GCACAGAGACATCTGCATCTAATGGTTATTCAGTTCACCAACTAAAAGACACATTTGATCACTTGGAATTCACTTTAAATTCTGTGTAAAATCACTTTGGAAATCTCTTGGGTAGTGTGGCATTTTGCCATCAGATCCCATACATAATATATCTATTTTTTTCTGACATGATTATTTTCTCATTTACTTAGTTCTTGTTGCAAAAGTTAA--TGGTAAGTGTG---------------------------GCCTTTATGCCTCAGGAAAAATATATTTTTTCTGACACTTCTCAGGGAT-CTCGTGTTCCTTTGCTCCGTTCCTGCTGTACAGAGGA--GACGTCCGCCCCCAGAGCCCCAGCCTCTCAGTG--CCAGTGGCCTCTGTGTCATAGTTTCA-----TTCA------TCATTTCAG------------AGATGAGGGTCCCCTCGC---CCAACACACGAA--AGCTCTATAATTA-------------CTT-----------TCATTTC-------TTGGTTAGCATAGGTCATGGAACTAGTGTTAATAATCATCTTTCCCTCTGGACTTCTCTGTATTTATATATCTCTGATCCCATCACCGTTGGGACCATAGAGGTGTATTTTATCTTCATTTCAGTCCTCATGGTATTGTTTCAGCCCAGGGGGGAAATCAAATGAGGTACAGAACATGGTAAGTTCACACTACTCTGAGGTCATTAACACCTAATTAGAAACAGCTTAGAGATCCAAATGATTCTTTGGTTAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGAGAGAGAGAGAGCTGACAATATTTAACTTCTTCATTGCCAGTATGGTCTTTATCACCAACGGCTGGGGCAATACCTCATTGTGTTTTATCAAACCTTAAGTAGGAGTATTTGTATGTGTGTGTTTTCCTTTTCTTTTTTTCTTTTTATGTGATAGGATACGCAGTCTGTTAAACCATCGAATAGCAAGAAGAGAAGACTGTCTAAAGGCTTAACATACTAATTGA chr4 - 94230402 52125204 52125203 52128416 42101987 42101986 42105199 3213 TCTCTTTCAATCTTTTT-----GCTGTACATACCATTAAAAGAGCAGTCTATGTGACCTTTTTCTTTGGGGTTAATAAAGAATGCA--GTTTCATAAGCTTGATTCAATTTCCTTTGTGTGAGCATGCTGAATAAGTGACCATTATAGTATTCGTCTGGTTTTCCATGCTACAGTGTGCAGTTACCAACCTTTTATATGAATGACCACATCTGGTGTGCATTTGGCCACATAAGGTGAGACAAAAGCAAAATAGATTTTCCTTAGCATTAAATCAAATTTCCACACAATGTACTCTCTAATGTGGATCTCAAATGTATCAGGTCATATATTATTTAGCTGCATTGCATTTTGTGCTTTTTTTAATTCCGTCCCACGTATCCAATTTTAATAAATGCATGAGTAGATGCAATATTTGAGCATTATATCTTAGAAATTCAACACTTTCAACAGATTCTTCAGACTTCAAAGAATTTAATATTAGTATCGTAAAAGGTCTTTTGAAGAATAATACTAGAACATAAGAAAAATGACTGCTTGAGTGTGCCCCATCATTTTGAAAGTGTTTTATTGCTTTAATTTCCTGTCTTACTAAAGTAACAAGCAGAATAATAGAAGATATACTGTAAGAGAGTTTGCAATTTATTAGAAGGTTTGAGCTGGTTGAAGACTTTATGTGATGTGAAAAAGAAAACCTCTGTTTAGCTGAAAAATGGAGACAAGCTACAACATTAATGTTGCAGCAGCTTTAAATGGAGTACTGTCTTTGACTACTAAGTTGTCTCCACAAGCCCAGTATGTTTGAATGGGGTAAATCTATAAGTATAGGGCTCATTTGGTGCTTGTTGCCTGTAGATAAGCTCCTGGAAATCTCATGTCATTTCATCCATGATGTGTACGTAAGTTG-TTATTGCTATTTGGATTTCATAGAA---------CATTGCAGCTGCATTGATCCATAATGAGAATTTTCATTTATATATCATAGTTCTACTATATG---ATGAAATTTAAT-----------TCAATCTGGTATAGACAAAGGTTAAACTATGCTAGGTTTT--CAAAGTAACTTTTACCTGTCTTAA-----TTTTA-----------------ACTAAAATGTTGGGAATTCATCCCACGAAGGAAATGGTGAAAATACAGTTATCCGTTTTGAAAGTGTAGAAATGAAAGATGAG--AAAGTAACTAACCTATAAAAAT-ATGATGTAAGATTACTTCATAAGTGAAGTACTTATTTCCCTAGAAGGAGCAGTAGACTATCCA----------------------------------GTTGCTTCTT-------ACAGTGTGTGTAGCCAGATACTCAGGCATCAATCTGTATGTTTATGATGGAAGTTATATGTTTATCAGTGCAGAGCAAGATGTGCAAGAATCACAAGGGCTTCTTAATCCCACCAGTGTTCTGCTACTGAAGGATTACTAAACAGCTGGTTGCAACAGATTGCTTGGTATTTTCAGAAAACAAAATAAAGTATGTAATAATG-CGTGT-CCAATCCCTTTGAAACAACAGAAAGAACA------CTCTAGGATGAGATTTTGTTGATAATTCTGTTTTAATGGATTGCAGGTTGTGTGAATTTGAGCGTCTCTTGTATTTGGGAGTTATTGAACAATACCGTTCTGCTTTTCAGCTGAGACACTTCTTGTGATGTTGTGAGGAGGGCCGATAGTGTAAATTCATATAGTAGAAATCTAACTG-----TAAAAGCTCATATGTTTAACTAACATA-TTGGACTCCTAG-AGGCTCAAGTACAAGCAAAAGCCCAAATATTACTGGTGTCCTCAGTTATCTGAGTAAGTCTTTCAAAGAATAATGATTTGCAAGCCTTATTGCTAACTGAAGCGCAAAAGATTTCCTCTGGGCTTGCCACAGACAATCCTCAGGCACATTAGGGGAGTCAACTAGAGTTAGTTCAAAGTGAATTGCTCCATTTTATTCACAGTGACTTTAGCCTCTCAGTCAATATGCCATAATGGCATATTGTCAG-----------------------------------TGATTTTTTATTTTTAAATGACAAGTTTGGTCACTTTATTTTAAGGTATATTTTAGAGTGTTTACGAGATTTGTAGATTCAACAGCTCTTCAAAGAGACTCTCTGTCTTGCTTT--GCTACACTGAATTTTTGTATTGCTGTTATTTCATTACCTTGAGGCAGTTCTTAGTTAAAATACATGGA-GATGCTTT----------ACATCTGAATGAGTTCTTAGTATGATATA-TAACCAATTATGCAGCTATAACGAGTTCAAATTTTAAAAACCAAATAAGAAATGTTGCACTAAGGATTACTAAAGACTAG--CATTACCCTCTCTTCACTTCTTTGCAAATAGGAAACAGGTATGTAACAGTAGTCTGCACAA----------ATATTACTGTCATTAAGTTAAAAAATTCAG----CTATTTGATTACTTTAA---TACTTTA--------GCTAATTAACTCTGAAA---CCTTGGAGGGTTT-------------------------------TATGCATTCTCTAAAGTCAGTGTCAATTTCCTATATACTCAGATCACTTCCTAAAAGCTAAGTTGTTCAGGATATCAAATAATAATCAATGAACAAAAACTACTGTTCTGTTCCCTGTCAGATTTTTTTTCCTCAGCACACCTGAGAGACGCTTGTGCTATTTTTAT---TTCTTACAGTGTAACTGATTAATGTACA----------CTGAATCTTCCAGGGAATCTGCTGCTTTTTTCTCAATTTTTCAAGAGTTTTAAGAACCTTCTTCTAGGCACATGGAACTAGATGCAGAATCTTTCCCATTCCTGGACCTGAATGAGTTTTGTAAATAGTAAAGGAAGAGGCTTCTGTAGTAAAATCACTTCTGTATGTTTTGTTAATACAGGTTGTAGAACTACTGATGATGATGATCTTTCCCATTAGACTTTCCTGTATTTATGTCTCTC--GTCCAATAACCACAGGGATCATTGAGGTGTATTTTATCTTCATTTCAGCCCTCTTGATATCATTTCAGCCCAAAGGGGAAATCAAATGAGATATAGAAGATGCTAA-CTCACACAACTCTCAGGTCATTAACAACTAATTAGAAACAGCTTAGAGATCTCAATCATCCTTTAGGTAAAATGT----------------------------------GAGAGGGGGATCAGAGAACATTTAACGTCTTCACTTCCCTT-TATTTTTTCTAGACAGTGGCCAAG----CATATGATAGTTTTGACTTACAttctcttcttgtttatctgttttgatttttttcttttttttttctttctttttttttgtt---------tgtttgtttgtttgtttgtttgCAAAAAGAGTATA-TATTTGGGGGC--AACATAATAGGTGA .......:.:x......-----:x...x.x........::...:....-.:.x............xx.:.................--.:::...:...:................:.....:..:....x................---..:.....x..:...:....x.:x.x:::....x...:......................x..x.................x........-...................:.x......x....x.:.............x:...............:.x.........x................:........:........:...xxxx.x....:--....:...:.:.......:.....:.....xx.x..............x:.....:..........x..............................................:.:..........................:..............:......:.......:...:.......x................................xx...............x.:.............:...x.x.......................:......x:..................x..................:...x................:.---..x....:..........................x.:x.:.......:x...........:...x:...x.........x...:::.........::.:.:.:xx.......x.x...x.:..:x...x:x..:.:....:....:..x....:.......:::...x.:..:::....x..-:.:..............::....x.---------....:x...x.x.x...:......::x:x....:....:..x...:.:.x..:.xx:..::.---x....x......-----------....:..:..::.-------....x.:::x...---....--..x...xx.x.x.....xxx..x.-----.....-----------------.:.....x.xx:.:x...:.......x:.:.-x.::.x..x...x..x..x.x.:-::x:...x...........:x....x.--.x.:.:........:.......-.x.x..x..:.....:......:.:--------.:...xxx::.:..:.x..:..:x...::.----------------------------------..x....:.:-------...xx..:x...x:.....:xx.:.:......x.x.:x:-.:.:x:.......:..:x..........x.....:.....x..::..........:.x...:.............x......x.x..::..:....:.x.....x...x.:x:.........:..:..x...::.xx...:...x:.....:x.x....x.:-.:...-xx..x..x:.x....x:..xx....:x..------...x..xx..xx.x..--:::..:...:.:x::x...---.x.:.....x::::.:.:x...x..:x::.x...:-----::.x....x:.----::..:..xx.x:xx...:..:x..x.x.....x::.----------.:::..x::x.........------------.:....-----.xx..::.x:..::::...x::x....-:..x.x.x..x.-....----.x..:x.x:.:......:.::..x.....x.:...x.......:x..xx:.....x:.........x....x.....:.................:........x..........x....:.......................:.......x.......................:..::......x...::.........x.xx..xx.......:x.::.xx:.x...:.......-----------------------------------.xx...:.:x.:....x....:.x-::x..:...............:.......xx...x.x.x.:......:::...xx..::..x.......:x.....---......:x..--:.x.:..x..:.:.x.x.:-----..x.:.::x..x...:x.---.:.:...:.:......x::....-:.......----------...x.::x:.....x....:.:...x::.-.x:x.......:x..:.....:....x....:.......xx......--.....:......x...::.....:...:..:--xx....:::x..:.....xx..::....:.....:.x:.x:.::.:x..------.....:----------..x.x.:x..:...x....x.xx..:.x.:----x:.......:....x:.---:......--------.:x..x.x...:..:..---:.....:x:..x.-------------------------------...x:...:.:.xxx.x..xx:.:.x....::..x....:..x..x:x.:x:.....:...--..x.x..x:.:---------------------------:.:x..x..:::.xx.xx.:..x.x....::::::...x:..x..:..:-..:...:.x:...xx.---...:.:.x..::.:xx..--:.:..x.:----------.:x.::..::...x.--:.x.:x..:.:.x.x...xxx.....-----..:.------.:x..::..------------.....x:.:x:.::..x.---..x:x..x:...--..:.:.:...x..-------------...-----------...:...-------..x....::.:....::.:......x..x.:..:..x.........x:.:.....::..........:.x....--:...x..x...::x....:...x.........................:....x..:...::..........::................:..:....x...x...-:......x.....x............x........................:x...x..:....:.x...:....----------------------------------.....:.:..x.x..x..:.......x......:.x..xx.-.:x.:...x.x:x..::...:::.----:.:x.x..x..x..xxx.:.x.:::.xxx:xx.xx...:...x.xx:.x.x...:::....:...:.........x.x..x.---------x..:....x:x:::.:x:x.x....:.....x.x.-.:.:.:::...--......x..:x... 17M5D26M1I37M2D59M3I90M1I128M2I349M3I182M1D25M9D62M3D12M11D13M7I13M3I4M2D24M5D5M17D31M1I23M1I27M2D22M1D25M8I30M34D10M7D39M1I162M1D5M1D29M6D16M2I19M3I35M5I11M4I36M10I19M12I6M5D27M1D12M1D4M4I239M35D24M1I76M3I10M2D19M5I18M3I23M1D8M10D29M1D47M2I31M2D49M6I6M10D30M4D17M3D7M8D17M3D13M31D61M2I11M27I49M1I16M3D18M2I8M10D15M2I26M5I4M6I9M12I18M3I12M2I13M13I3M11I7M7I74M2D106M1D75M34D41M1D24M4D82M9D35M1D11M2D14M 2197/3029 72.5% 3213/94230402 0.0% 475/3029 15.7% 129484228 60730327 +3035 chr4 + 190214555 181641753 181641752 181641857 105 GGTGTGTATATATATATATACATACACACACCATATATATATACACACACACCATATATATATATATATATATATATATATATATATATATGCCACATTTTCTTT chr4 - 94230402 21751630 21751629 21751734 72478669 72478668 72478773 105 GATTTATTTATTTATTTATCAAAGTACCCACCATGCATGCACAAACACATACAATATTTGTATTCATTTGTATATAGATTTGAATATAAAACAGATATTATTTTT .:.x.:.x...x...x...xx.x::..x......::..::.:.x.....:..x....x.:...x:..x.:......x..x.:x.....x.xxxx.:...x.:... 105M 67/105 63.8% 105/94230402 0.0% 0/105 0.0% 159890123 30324432 +3240 chr4 + 190214555 181652107 181652106 181652177 71 TTTTCCCTTTTGGCAAATCACAAAGCACTTTGGGGTAAAAAAAAAAAAAAAAAAAAAAATCCACTCAGGCT chr4 - 94230402 32492178 32492177 32492248 61738155 61738154 61738225 71 TTTCCTCTTTTGGGGGCAAACGGAACACTTAGGGGAAAAAAAAAAGAAAGAAAAAAATCTCCTCCCAAACT ...:.:.......x::xxx..::.:.....x....x.........:...:.......xx...x.:..::.. 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 149159929 41054626 +3084 chr4 + 190214555 181652135 181652134 181652174 40 TTTGGGGTAAAAAAAAAAAAAAAAAAAAAAATCCACTCAG chr4 - 94230402 4677609 4677608 4677648 89552755 89552754 89552794 40 TTTAAAGTAAAAAAAAAAAAAAAAAGAAAAGTCCACTCAG ...:::...................:....:......... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 176974526 13240029 +48904 chr4 + 190214555 181660169 181660168 181661825 1657 CATTGTGGGGGTATGGTTAATTGGTCTTGAAAGACAATTAATATCTGTCAAGAACA-----TGTACAACACACACAGGTTTTGCAAACAGTC-AGTCCCTTTGCCCCCTTTTTCTCTGTTGTTCTGTTTATTGTGCCCAGTTAATGTGCTCTTTTGCCATAATAATCTTCAGCGAAATGGTAATTGCTCTATTGACGGCATTACTGTACATTTTTGACAGATCATTATTCATACTTAACCACTTGACCTGGAATAAATGTTAAAGCAATTACCACTGAGAGCTTTTCTATGAGAAAATTGAGGCAAAGTTTAGAGATAATCAAAATGCAAAGCTGATCATGATAGCAATTGGAAAAACGGCAAATCCTATCAAACAGATTTTTATTAGCCAAGTTGATGCCAGTAGATATTATCTGGTAATTTAGTCTTATTAAAAAGAAAATAAAGCAGCTAATTGTTTACTATTCTGGAACTTATTCCGGCTTGCAATTTGCAGCTGAAATTAGGCTTTATGTGGCTTATCTATTTTGTCACATGGAAATATG-AAATCATTTGGTACAAAGCACATCTGCTTAATGCCTCTTACGTTACTGGAAAAATCCCTCATTCAATATGTTTTACACCTGTTGAGGCATTATGGATGGATGAATTTATAGCAACCAATACAAAAGCTAATATTCAGTATCTTTTTATTATATCAAATACTTTCAAAGTCT--GTATTTCTAAGGATTACATTCTATCCATGCTTTATCTTACTTTGTGTTAAAACATCAACACAAATGATTTCTTTTTACATCAATCCACAATGCAACAAGCTTCTAGGAGCACCGCAGATATGTAGTTCAAGTCATTAGAAATAAGAAATCATCTAATA---ATTTGGA-CCCCAAACGTAAGTATGTAAATGGA-AGAGACAATGATACATTTCTCAACAATATCAAGTGAAGATAAATAATTGTCAAATTTTGGAAGTAAAATGCTAAATCAGTTGCGT---AATGGTGAAAATCTTTAATGGCATAAAAACTGAC-TCTAATATCGATGGGCACAATTCCTTCCTTGATCTTACTTTACACTTTGAAATCAGCACATGCTCACGAGCTGACTATTTATGAGTCAGTTAAACCCACAACTTATTCATCTCATTTCATCATTCAAGTGGCTAGTGGACCTGCACTTTCAGGTTAAAAATATTCCGAAAATTGCCTTTTCACATAATCTTTCCATACTAAGTTGAGAAATTATTTGAGACAACAAAAGTTGACTAAATTCCATTTAAATTTCTGCACAAAACACCCTGTTTCCCCTAGTTCTTAAAGGCTGTTTTGGTAAAATGTTTGGCATGATTCAGTCTTTGGACTAATATCTAGAGCAAAGCTGTAATCAAAAATGTGTACCAAAGGACAC--AGAAAGTCTTAAACAGATAGTGTAAAGTTTTACTAGCCCCTACTGAATTGCGAGCCCTGTTTGAAAACTATCATTAAAATTCAGAAAAATGATTACTGATATGCTGGTATGGTTATCCTGGGAGGTGCGGTTATCAGGGTCTGCTCCAGTTGGTTGCTGTAGTTTCTGTATTAATGGAGGGTTTTTTCACAGTTAATGAAAG------GAGACACTTTCTTTTAATAAGTCAATAAAACAGTAA---------GTGGATTTTTCCCTCTTTCTTCTG chr4 - 94230402 52144929 52144928 52146273 42084130 42084129 42085474 1345 CGTTGTGGAG------TTAATTGCTCTTATGTAACAACTAATATCTGTCAGTAACACACACTGCAAAGCGCTGGCAGATTCTGAAAACAGTTTGGTCCCTTTGCCCCTTCTTTCTTTGTTGTTCTGTTTACTGTGCCCAGTTAATGTGCTCTTGTGCCATAATAATCTCTAGCTAAATGGTAATTGCTCTATTGACAGCACTACTGTACATTTTTGACACATCATTATTCATACTTAACCACTTGACCTGGAATAAATGTTAAAGCAATTACTACTGAGAGCTTTTCTATGAGAAAATTGAGGCAAAGTTTAAAGATAATCAAAATGCAAAGCTGATCATGATAGCAACTGGAAAAATGGCAAATCCTATTAAACAGATTTTTATTAGCCAAGTTGATGCCAGTAGATATTATCTGGTAATTTAGTCTTATTAAAAAGAAAATAAAGCAGCTAATTGTTTACTATTCTGGAACTTATTCCAGCTTGCAATTTGCGACTGAAATTAAGCTTTATGTGGCTCATCTATTTTGTCACATTGAAATATGAAAATCATTTGGTACAAAGCACATCTGCTCAGTCCTTTCTATCTTACTGGTAAA--TCCTCATTTGGTGTGCTTCATACCTGTTGAGGCGT----------TGCATTCAT-GCACGGAGCACCAACGT-----TTTGCTATTCTTCTCT----TCCGAACCTTGAAAAGTCTTAAAAGTTTTTGAAATTCCTCCTTA---ATATTTT-TCCTCCTTTGT------------ACATA--------CCTCTGACAACCGTAAAAAATGT------------------------GTGTGT------------------------ATAATCTGATGTTTACTTGGAGCCTCCAGAGGGAGTTTGGAAATGGAGAGGGGCAAAGTTAT------------------------------------------------------TGCTATGT-AGTCGTGTGGAAATTGTCCAAATCTCC---------CAGACCAACGTTTTATTTTGATAG--------------------TTAATT---------------GCATATTTGCTCTAGCTGCGTTTGTAT------------TCTACAA------------------------GAAAAGCTAAGCAATCTGCAGTTT-----------------------------------------------------------AGTTGTTTA-------AAAAGTGG---------CATTTACGCTGTT-CTCAAATCATTCTGCAGGCCCCA-------------ATTGCGGCACAATGCCTG---CAGTACAGTGCTTACAGTA-----------AAAGCTGTAATTATAAAAGAATGCCAGAAGACATCAAGGAAGCCTTAAAGGGATAGCGTAAGCTTTTACTGCCCCCATCTGAACTATGAGCCTTGCTTGAAAACCACCATTAGGATGCAGAATCCTGATTGTTGATATGTCACTATTGCTGTCATGGGAGAAGT-GTTATAAGGG------CCAGAATCTTGCAGCGGTTTCTGTATTAATGAA--GCTTTTCCATACTTAATGAAAGCAAAGAAAGATTGttttttttttttaattaataaaatattaaaaCCAGGGGAGGAAATCTTCTCTCTCCATGCTG .:......:.------.......x....:x:x:....:............:x....-----..:.x.:.:.xx:...:..:..x.......:-:.............:.:.....:..............:......................x..............::...x......................:...:..................x....................................................:.......................................:...................................:........:............:.............................................................................................................:.............::.........:.............:................x........-............................:.:.x.:.::..:x.......x...--:.......:::.:..:..:.:............:.----------..x...:..-...xxx.::..x..x.:-----..::x...::..:.x.----..x:.xx...xx.......--:x.x..:.x:::...x.x:::..---..::...-..:.x......------------...:.--------.:.:.x...x.x:.xx.x....:------------------------:.:...------------------------..x....:..:---.:.....-..:.x.:x.x:...x..x.......-..:.:...x.x..:------------------------------------------------------.....x:.-...:.:..---...x..xx......::---------x.:..::..-.:.x..x.:...:.--------------------...x..---------------...:..x:x.x.x.....xx.x.x...------------:.:....------------------------:.:x:....:xx:.:.....x...-----------------------------------------------------------.:..:...:-------......x.---------......x::.x:.-.x....x..::...:xxx...:.-------------:..x:..:.x....::..---:::.x....x:..:x.x..-----------...........:.x...x.x:.:...:.:....:--..:...:......x:.....:....:x.......:x....xx.....:.::.....:..:........:.:.....::..x.....xxx.....::.......:::x...x.:.:..x......:x.:-.....x....------....xxxx....x.::...............:.--.:....:..:.x..........------:...:xx...:....xx.x.:.:.......:.x...---------:x.:.x.:...:....::x.x... 10M6D40M5I31M1I452M1I53M2D35M10D9M1D17M5D16M4D19M2I23M3D7M1D11M12D5M8D23M24D6M24D11M3I7M1I25M1I14M54D8M1D8M3I16M9D9M1I14M20D6M15D27M12D7M24D24M59D9M7D8M9D13M1D23M13D18M3D19M11D34M2I128M1D10M6D33M2D22M6I36M9I24M 1021/1310 77.9% 1345/94230402 0.0% 382/1310 29.2% 129515240 60699315 +3413 chr4 + 190214555 181665608 181665607 181665710 103 ATATACAATGTGTATATATACACACACATACACACACATATATACATATACAGACATATTATGTACACATATATGTATATATACACACACGTACCCTGTTCTG chr4 - 94230402 61485364 61485363 61485460 32744943 32744942 32745039 97 ATCTACAGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTG------TAGATGTATAGATAGATAGGTGTACATTGTTGTG ..x....:x:.:..:...:.:........:.....x::.:.:..::...::.xx:.....x..------..x.......x...x.:.x::....x:....x.. 63M6D34M 65/97 67.0% 97/94230402 0.0% 6/97 6.2% 120180244 70034311 +3012 chr4 + 190214555 181665610 181665609 181665671 62 ATACAATGTGTATATATACACACACATACACACACATATATACATATACAGACATATTATGT chr4 - 94230402 25493124 25493123 25493185 68737218 68737217 68737279 62 ACACAAACAGCATATTTATTTACCCATACATACATATATGTACATATACAGGTATATAATAT .:....xxx.:....x..:x:..x......:...:....:...........::....x..:. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 156172486 34042069 +27389 chr4 + 190214555 181670131 181670130 181671165 1035 CTCAAGGTAAATGGATTGCAAGTATTGATTAATACT-TTGGAATGAATACCATTTCATA-ATTTTTAATTAACCACTAGGTAATATTTAATGGAAACTGCATAGTGCCATAGATATGAATTTGAAAAATGAGGAGGTAAAAGGGTCCG--------TCCCTTAGTCCCATTGTGGTAAAAGTAATTGCCGAGAGTGACCGGTTTGTAACCGTGTTTTCTTCTCTGGTAATTCTAGGTTATTAATGTCCCAAAGCACAAAGTGATACTGCTGTATTAATTCTCTTGGCCTCGAAATGA--TCTACAGCACAATTTAAGAACCATGCATCTTGTCATCACTTAAAATTG-------------TTTTTAACCCAATGAAAGATA---GAAAAAAAGGCAGTGAATCTTGTGGAACTAGAGAAGAAATTCACCCATATATGTGATCTTTTGA--AAATACTAGCAATATTAAGTAATA---CTAGTTTTGCTGTAG-----ACACAAGGCACTGAAGTTA-AGAGGGAAAAAATGT-----GTACTTGGTTGTAGGGCATTCAACACTGTAGGTATTACATCAGCAAGTAGCATTTGGGTAGAAATGGAAACA------------------ATGAAGGTACAGTCT---------------TCACATAGTGAACTATTAGAAGTACT-------GTGTCTGT-------------------------------------------------------------CGCAGGAGGAACCCAGAATTTAAATGAACCATTTATGACTCAGCTGCCCTAGGGCAAGCACAAGATTCATTAATAATGCAGTGTTTATTT-GAAATATTTTATTATAACGCACATTTATTACAAAAAAATCTAAACAGCAG----AAAAAAGCCAGCATTGCACAGGTTCGGCATTCTGGACAAGTTATTTTCAAAATGGGATTCTTGGCAAATTATATCATTTCTTTCAATACTTCACCTGTGACACTATAAAGAATACATATTTATTTAAGTAGTGGCATTATACACTGCTGCTTGTGTTGTACATAATTTATAGAAAATGATCTACCAACATGGATAGGTAATGTTCCCCGTGAAAGTAAACGGTTAGAATTAGAAAGTGATGAAGAGCTCTGAGAGTTGCCTAATATGAGGTGGAGTAAATT chr4 - 94230402 52150422 52150421 52151586 42078817 42078816 42079981 1165 CTCCAAATAAACTGTCTGAATATATAGACTTATACTGTTTGAATGAAGAAAGCATTGTGCACTTTCAATTAACAAGCAAGTATT-TTTAACGG-----GTGTAG----GTAAATACATATATGAAGGTTGGGGGTGGGAGTGGTTCCTGAGTTTTCTCTTTTAATTTCAGCATCGTGGCAGCAACTGAAGAAAACAACCAATTTGTTGCCATGTTTTCTTTCCTGATGGTTCAAGATTATTAGTGCCCCAAACTACAAAGTGATAGTGATACATTAATCCCCTCTGAACAGGAAGGAGATCTATAATGTAATTTAGGAGCCGTGTACTTTAGTCCCATTTTCAATTGATTGATCCTGTTGTTCTTATCACAAACAATGACAAGTGTTGAAAGTATAAAGAAT-TTGTGTAATTAGAGA-TAAATTAATCAGGATACATTTTCTTTCTGTGAAATACCAGCAGTGCTAGAGAAAGTGCCTCGCTTTGTTACAGCGCTGGTACGGTTTTCAGCAGAAATATAGGGCAAAGGTATTGATTGGAGTTCATTTTAGAACATTATATGCTGTGTGTAATACTTCAGCCCTCAGCACTGATTTGGAAATAAAAACACAACAGAGAGCCCGATTGAGAAAAGCAGTGCCTCATTTGTCAGTTGTGTCACCTGGCACGC-ATCAGAAGTAGTTTCTGTAATGTCTATGAAGTTCCAGCAAGTAAAAAGGTAATATAAATGAGATCGGGACTAGCTCTATTGTACGTAATGTAAGAAGAGCACAGAATTTAAACGATGGATTTATGCCAGAGCTGCCCTGGGGCGAGTAAGTAGTGCATTAATAATGCAGTGtttattttgaaatattttattacaat-----tttacta--aatatattaaaataGCAGTGGAAAAAAAGCCAATTGTACACATATTCAGCATTTTGGAGAAGTTATTTTTACAAAAAGATTCTTGGCAGACTATATAATTTCTTTTAGTACTTCACCTGTGACACTATAAATAATACATATTTATTTAAGTAGAGCTATTATACACCACTATTTCTGTTGTACATAATTTATAGGCAGTGATCTCCTAACATGTGTAGGCAATGTTCTCTATGAAAATGAATGTTCAGAATACGGTAGTTCTAAAGGAATGAAGCAGTTACTTAAACTGGATTGAACTGAGCT ...x.::....:x.x:..x.x:...x..:.x.....-..x.......x.xx::x.::.:-.:...:.......x.x:.:...x.-.....:..-----.::...----:..:...::x..x....::x..:..:x.x:.:x..x...x--------..::...:.::..x::.x..::x..:..:..xx..:.:::...::.....x:..:.........::...:.::...x..:......:..:......x:...........x..x.::......:.:..:x.xx:x.:..x..--....:.::::......:..:..:..:.::..:x:x:..:..xx.....-------------..:...x.x...xx..x..:.---.xx:...:x::.:x....-.....x..:......-x.....x.:.x:x...::.xx.....:x:--......:....:.::..::x..x:---..x.:....:.::..-----::..::xx:x.x.x..xx.-.x....x...::.:.-----.x.x..x:..x...::....xx.::....:x...x...x.....xxx:....:.x:xx.:.....::.....------------------.x:..:.:.xx.:..---------------....x.:.::x:.-..:.......x.-------:.....:.-------------------------------------------------------------:.:.:..:..:.x...........:..xxx.......x.xx.........:....:..:.x:x::.x.......................-..............:..:-----....:..--..x.x..:x...:.....----..........::xx.:....x:...:.....:....x..........:.x..x::...........:.:.....x........:.:.......................x.....................x.x:.........::..::..x...................:x.:......x.:......x:....:.......:.::.....:.:..:.x.:.....xx.:x...xx.:...::x.xx::x....:.:...xx..::x..:.x.:.::. 36M1I22M1I24M1D8M5D6M4D40M8I141M2I48M13I21M3I18M1D15M1D29M2I24M3I15M5I19M1I15M5I72M18I15M15I13M1D12M7I8M61I90M1I18M5D7M2D18M4I281M 687/1015 67.7% 1165/94230402 0.0% 170/1015 16.7% 129519709 60694846 +3275 chr4 + 190214555 181685071 181685070 181685141 71 GTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTAACATCTAAAAAGATGCCAGGAGTCAATTAAGTGTGCAGA chr4 - 94230402 21022194 21022193 21022264 73208139 73208138 73208209 71 GTTTTTTTGTTTTGTTTTGTTTGTTTGTTTTTAAATATAGAATAAAGACAAAATACAAATGATTAGACAAA ...............................x.x..x..:..x:.x.x..::.xx...x.:.x.:x:..:. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 160662877 29551678 +9956 chr4 + 190214555 181685838 181685837 181686226 389 CAGAAACCCCTATATGAAATCCCTGCACATTTTCTCATCTACTAGTGGGTGTTCCTAGGGAACACGTTTAATTGTAACTTTTCAAATATTGTTCTCAGGGTGTTAGTATTACTTGTCTGTATTGTTCTGACATTTTAGCCATCGAAGGTGTTTTTGTATGGGAAACAAAATGCAGGATGACAAATGAAAATCA-TCAAATCGGATCAGTATGCATATTTTTTCTGAGTCACTGTGCCCTTTGCTGGGCTCTGGCAAACTAGTTTTACTCATCTTTGTAGGCGAAGTGTAATAAACAATGACTAC-AACATCTACAG---TTTAGAAGTCAGCAGCTGCAGATAGTGGAATGACTCAAATACCAATCCATGCTACCCAGACATCCCGACAGCATA chr4 - 94230402 52155990 52155989 52156354 42074049 42074048 42074413 365 CACAAAGCACAATCCTAATCCTATAAACATTTCTGTATCTGTTAATGGGTGTTTTTCAGA-------TGAGGTTTAACTTTAAAAACATAGTTTCAAGGGAACTATTGACATTTGTGTGACTTGACATGACATTTTAGTGATTTA--GAGTTTTTGTTTTGGA---------------GACAAATGAAAATCAACCAAGTAGAATCACTTTGCATATTGTT-CTGAGTCACTGTGTCCCTTGCTGTGTGAGGGCAAGCTAGTCTTACTGCTCTTTGCAGCCATGGTACAATAAA----GACTACTGTTAGAAACAGGCTTTTGAACGTCATTGATGCCAAGTGGTGAAATGTCTCAAATACCAAGAAGCACTTCGCAGAAATCTTAGCAGCACA ..x...x.x.x..x:x..x:.:x.:x......::x:....::..:........::.x:.:-------.x.:x.x.......xx...:..x...::x....x::..x.:x:.:....x..xx...x:x...........:x..:x.--.x........x.x...---------------...............-:...:.x.:....x.x........x..-.............:..:......x.:xxx.....:.....:.....xx......:..x.:x:..::......----......-:x:.xxx....---...::.x....x::::xx..::.:...:....x............xxx:::..x.x....x...::::.....:. 60M7D78M2D16M15D15M1I27M1D72M4D6M1I11M3I75M 243/360 67.5% 365/94230402 0.0% 34/360 9.4% 129529848 60684707 +18981 chr4 + 190214555 181688510 181688509 181688916 407 TCGTTCAGAGTTAGCCCTTAGGGTTTTGCAAGTACGTGTCATTGTGTCTCACATCCCCTGCTGTGAAAATCAACTTGCATTTGAATGTGCATCTTGACCCATAAATGTCACTGTGGTCCACTGAGTATC-TGGCTTCAACATTTCCTGTGGTAAAATGGACAATGGGA-AACAATATTTTTTCTTGAGAAGGGGGCCTGCCACAGAGTATCTGTGTATGTCCATGAGTGTTTGTAGCACAGACAGGAGAAACTGCAACAGTCGGGGTTTAAGTGCATGTCTCCAACTATTAAGCAAGATGATACCAGACAACAAAGTTTCTGAAGAGCTTTGTGAGGAAAAGAAAATGCCAGATTATCGTTTCTGTTTCCAATTCACTTCTCCCTTTCACGGGACCCCATTCATCCTGG chr4 - 94230402 52157668 52157667 52158047 42072356 42072355 42072735 380 TTGTTCAGAACCAGTGCTTAGGGGTTTGCTTATAGGTGTCATTGTGTCTCACATCCC-TGCTGTGAAAATCAGCATGCATTTGAATGTGCATCTTGACCCATAAATGTCACCCTGGTCCACTGAGCATCTTGACTTCAACATTTCCTGTTGTAAAATGGACAATGGGATAACACTTCTTTTTCTGAAG--GAGGACCTGTGACA----ATGTGTGCATGT---------------GTGCAGTCAGGAGAAACTGCGGCACTCGGGATTTGAAAGCGTGTCATCAGCCACTGAGCAGGAGATCACAGGAGAACGAAGTTGCTGGACAGTTTTTGAAAAACACGA-------GGATTATCATTTTTGTTTCCAAGCCACTTCTCCTTTTCACAGCTCTGAATCCTTCTTGG .:.......:::..:x.......x.....xx:..x......................-..............:.x....................................:x............:...-..:................x..................-....x.x:.......x:..--.:..:....:x...----..x....:....---------------.::...x.............::..x.....:...:.:x..:....x:..:.:.:.:....:..x:x:..x:..x...:.....x...:.x..:...xx:.::.x.x..-------:.......:...:.........x:.........:......:.xx.:xx..:.x..:... 57M1D71M1I38M1I19M2D14M4D12M15D108M7D59M 297/378 78.6% 380/94230402 0.0% 31/378 8.2% 129530842 60683713 +47258 chr4 + 190214555 181690515 181690514 181692352 1838 TTTCTGAGCACTTTAAAAAATACATATGTATAAAAAATCATACTGAAAAAAATTTATGCTCAACGAAATTGTGACACTCACTCATCTGAAAAGCTTTGCTCATTCAAAC-CAGAGAGATTAATCACAGAAAGGAGATAAAAAAAAAAATTCCCTGAAAGGGAAGGGAAATAATTTAGCAGTAAATCATAGAGCAGGGCTAACGTGAATCACAGAAAAAGGTACCAGCTCTTATGATTTAGGTGACATATAAAAAATAGCCCTTTGTGGATTGACAGTTATAGGTATAAATGATAAAATTATTCAGCAGTGGTATGTTCTCTTCTTGTCATTTGTCATTTTGCATCTGATTATTTTTAAGAATTTAATTAAAGGGGTAACAGAACCATATAGAC-CTTTTGT-GACTCTAACAAGCAAATACCTTTTTAAGCCTTTTTAAAGAAAAATATATGACGGCTCTCTCCTTTTGCTTTGTCT-TTACTG-----AATGCTCTATGCATCTGCATGCGTGCTATTTTTTTCT-----TTATGCTATTTTAG-------GCTTCCAAGGAAAATTTAGTAAG----AAAACATTAAAAATCAAATGCAAAGTCATGCATTGTTATTAGCAGAAAAATTATTTTAGTTTAAATATACACTCAGAGACTGAATAAGAATTTATTTTTGAAATAAAATCAAAGATAATTGTACTTCTTCTTTCTGGCTCTGCAATTCAAAGTGACAAATATGATCTTGTGTGTGTGTGTGTGTGTGTATAATTAAG-TACATGTATATGTGTGCATAATAAGTGTGTGTATAAGTATATGTATACACAAACTCATATACATAAGCTGTGTGTTTAAGTGTGTATATACTTATTATACACACACACGATAAGATCGTACATTTCATATCAGCATGATAGATATTTTTCTGTAACAGAACTACAGATCAAAGCCTAGAGGATGTAGAAAGTGAATGACATCTTATAAAAGTAAGTGTAAAATGCAGTTTTAGCAAAGAGGCCCCCTTAGCATGAATTGTGTGTAACTTGCCTAAACTGGAGGGTTTTTTCCTTATGCTATTTATTTTAATGATAGGGTAAATGGGTTTTATACAAATAAATCCTGCAATAGGATCTGCACCGTCAAAA---TTCTTGTAAGAAAAACAAAAGTTGCGAGAACTAGTGTGACCATTATACAATGTGATCAACCAATACATTCTTAAAAATATACCCTGTGTGTGCAATTTTATTTGCAATTAATAAGAGTTAACACTACAAATCTAATTCACAGTCACTTTAAAGTTTTGCCTCCAAACCAGTTCAGTATTTTAACTGACTAAATTAAGACTTTTCTGTCTTTCCCCACCCCATCTCCCAGAGCAGAAATTAAATCAGTTTTAATTTATTTTATTTGCTAACGCTGTGGATATAATTATTGCTGCCTAGTCTTTTTCATTGTTTTCAACTAGGTGCTTGTCTTTAAGTTGCAATAGACTTCTAATTCCGCATTGTTGACATTCCCTTGTTAATTCTGACAAAGCGTCATAAATCCAGGTATTTAGGCTTATTGAATTTTGAAATGAGGTGATTAGTTGGCACATGGATGAACGAATTGATGCAAAGCAAAATGAATTTTATGATTTACTATGGTTTGCAAGTTCCCTTGGAACCATTATGTGCAAATTGTATAATGTATTAAGAGGTAAGATATCACATTTATAATCAACTTGGCAAATTTGGCTCAAGTAAAGATATTCCAGCATTCTGCA--------AAAGAGTCACTGTTGAATAAGCGTTTGGCATACACAATTAATTTTCACTGTGT-----TGTCTTACACTCTATCATTTCCAAGTCTAAGAGGCTAAAGTATAA chr4 - 94230402 52159755 52159754 52161384 42069019 42069018 42070648 1630 TTTCTAAGGATATTTAGA--TAAACATGTCTGAGAATATTTGTCAGTATGTGTGTGCATTCAGTGAAATT----CAAATACTCATTTAAAGAATATTACTTGTTTAAATTCAGAGGTATTAATCAGAAAAAGGAAGTCAAAACAA-----CTCTGAAAGAGAAAGGAAACAATTTACCAATAAACTGCAGAAGAGAAGTAGCATGAATCATGAAAAAATGGTGTA--TCTTGAGATTTATATGCTGTATAAAAAACAGCCTTTTATGGGTTGGCAGTTATAGGAATGAATGATAAAATTATTTAGCCACGGCTTAGTGTATTTTTACAATTAGT----TTGCACCTGATTACTTCAAGGAACTTAATTAAAGTGGCAGCAGAGGGCTGTAGACACTTTTGTTAATTGTAACAATTCTGTACTTTATAAATCCTTTCTAAAGAA-------------CTTATATCTTCTGCTCATTCTGTTAATAGCATAAAAGCTACATGCTACTCACTGCAAATTTTCTTTTGCTCATAGTTATGCT--TATAGACGAGGTGCATCCTAAATGTGATCAGTGAAGTACAGAATCTGAAAAAACAGATGCCAAATTCTGCA-------------AGAAAATACTTGTATTTG---------TCACAGA----------------TTTTGT-------CCATAGATAAGT----TTCAAGCTTCTGGTT----AATACTGAACAGAAA-----------TGCAGGTCTCCAGAAGATTGTAACTAAGCTACA-------GTTTGCATAC--AGTG-GTGTCTTAAAAAATACAAACA-------GTATTCAGTAGTT---------AGTTTGTAAACAGT--------------------GGATTGTATACTT---------------------------------------GTATTGAGTCCTAA------TAAGGAGTATGTG---TTTCATAAGGATGACTAT------------------------CTTTTTAAGAT--ATTATTTGCACTTT---TA-----------TTTTTCCTTGT-----TGATTT----GATTGGATGACTGCATCCTCTTAGATATAATATTGCAGGGGATTATTTATAATGAAAAAGTTGCCTATCAGAATAA--AAGCCTTCGAATCCT---GTAACTATGGAACACTAAACAGAAACAGTGTACTTTTAAAAATACATCTAACACACGCA-TTTTATGTGCAGTTAACTATACTTAGTACTCCAAGCTCAATTCAT--TCTCTTTAAAGTTTTACTTCAAAACAACTTCATTGTTTTAAGTGACTAAATTGAAGCTTTTTAGTGCTTCCTG---CAATCTCCCAAAACAGAAATAAAATCAGTTTTAATTTATTTTATTTGCTAACACTGTGGATATAATTATTGCTGCAGAGTCTTTTTAATTGTTTTCAACTAGGTGCTTGTCTTTAAGTTGCAATAGACTTCTAATTCTACATTGTTGATATTCCCCTGTTAATTTTGACAAAGCATCATAAATCCAGGTATTTAGGCTTATTGAATTTTGAAATGAGGTGATTAGTTGAAGCATGGATGAATGAACTGATGCAAAGCAAAATGAATTTTATGATTTACTGTCATTTACAAGTTCCATTGGAACCATTATGTGTGAATTGTAAAATGTATTAAGAGGTAAGTTATCACAGTTATAATCAACAATGCAGAATTTTCTCAAATAAAAGTATTCAAGCAGCCCACATTCAGCAGAAAGAGTAACTGTTGAGTAAGTGTTTATTATATACAGATAGTTTTTATTATAGATCAAGATTTTCCACTCCAGCATTTCAGTATACAAAAAACCaaaataaaa .....:..x.:x..x.:.--..x.:....x.:.:..xx:x.:::::x.x:x:.x.::::...::......----..xx:......:.:..:.::x..:..::..:...:-.....:x........x.:......::.x....x..-----.:.......:...:.....:......x..:....::::...:x..::x..:.:.......:::.....x.xxx:.--....:x......x:..x::.........:....:...:...:...:..........x..:...............:...x::..:x.:x.x.x..:..::x...x..----.....:.......:..:x.:...:..........x..:.:....:xxx.:.....-.......-:.:.x......x:xx:...:..x.x..x.....:.......-------------..:x:x:...:....:xx...-...x.:-----..x...x:....xx..xxx...:x::.x.:....x..-----.......--.x...-------..x...x.::x:x:x.:...:.:----.:..:x.x.....x..:....x..:.:x....-------------.:...x..:..xx:...:---------...x...----------------.....x-------:..x......x.----...xxx:......:.----...x.x:.::::x..-----------..::x..x.x::x:x.xx.:...:....-....-------..x......x--....-....x.x.:x.x..::.x...-------:...x..xx..:.---------...x....x.:.x.--------------------:...:...:.:..---------------------------------------:x..::.:x....:------..:::...:x:..---.:.:....:::.:.x.:.------------------------.:::...:x..--...:.x..:.x:..---..-----------.........:.-----.x....----...x..:.:.x..x:.::.x.xx:.xxx...x:....:x:.:x.x.x:.:x:.x....---.x.:.:.x....x..--..:x:.x...:xx..---..:..:..x:x...x.:x:xxx..x..:.::.:.:.........:.:.:x::::::...-......x....:....:x.x.x...::...x...::::......:--..x............:.:..x....x.x....x.:......x..........:.::.....:x..x:....:x---.x........:.:.......x...............................:......................xx.........x..................................................::.........:......:........:.........:.....................................................:x:..........:...:.................................:.x:...:........x................::.......x..................x.......x...........xxx...:.x..xx.....:....::.....x....x:.::..--------.......x........:....:....:x:...:...:x..:....:.:.:.:x-----x:.:..x.....:.x......x:x:.x:..:.::.:...:..x.. 18M2D50M4D35M1I35M5D75M2D107M4D55M1I7M1I41M13D21M1I6M5I37M5I7M2D5M7I23M4I32M13D18M9D7M16D6M7D12M4D15M4D15M11D28M1I4M7D10M2D4M1D21M7D13M9D14M20D13M39D14M6D13M3D18M24D11M2D14M3D2M11D11M5D6M4D58M3I15M2D15M3D59M1D45M2D73M3D402M8I53M5I45M 1131/1588 71.2% 1630/94230402 0.0% 292/1588 18.4% 129530760 60683795 +3130 chr4 + 190214555 181699430 181699429 181699494 65 CAGACCCTGTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAATAC chr4 - 94230402 24624341 24624340 24624405 69605998 69605997 69606062 65 CAGCCTCTATTTTAAAATACAGATGGAAAGAAAAAAAAAATAAGAAAGTATGACAAAGAAAATAC ...x.:..:.:x:....x.x.:.x::...:..........x.......x.x..x........... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 157075089 33139466 +3251 chr4 + 190214555 181699456 181699455 181699569 114 AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAATACTTTAGATACATTG-------CTAATATAATACATCATTATACAATTTATAGAGACTAATTAACTGAGGAGTTTTTCACATTT chr4 - 94230402 25247412 25247411 25247531 68982872 68982871 68982991 120 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCTTGAAATATTTTGAATCTAATCAATATGATAAAATATCA-ACATTTACCAGAAGATACATACATAAAGGCTTTGTAACCCTT ...............:...:...:.....:.x....:x...x.:...:x...-------::.....:...x.x:..:.-...x..xx:...::x..xx..xx.:.:.:x...x.x..x:.. 52M7I19M1D42M 76/113 67.3% 120/94230402 0.0% 8/113 7.1% 156452044 33762511 +3418 chr4 + 190214555 181699458 181699457 181699532 75 AAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAATACTTTAGATACATTGCTAATATAATACATCATTATACAAT chr4 - 94230402 25247412 25247411 25247485 68982918 68982917 68982991 74 AAAAAAAAAAAAAAAGAGAGAGAGAGAAAGATAAAACTCTTGAAATATTTTGAATCTAAT-CAATATGATAAAAT .................:...:...:.....x..x...:.x..x.:...x:x...x....-..x:..x...x... 60M1D14M 57/74 77.0% 74/94230402 0.0% 1/74 1.4% 156452046 33762509 +43226 chr4 + 190214555 181700955 181700954 181701712 758 TTATATTTTACACACTTCAATAGAAAATAG-GTCATCTTTTGTCTTTAATTCCACCTTTACTACAGAGGTGAAAGTGGTGTCATTCTATTTAATTGGCTACCTACAGTTCATTAGTGGAGGCAGCATCGTTAAGTCATACTGGAGCATTTGTAGGAGCTAATCTTCCGGGCACTTAGTATTCTCGTTGACCTTGTTAAAGGTAAGGCAGGTCAGACTTGGGTTCAACAGAGGCACTCTCCCACCAAGGAGACTGGCATGACAAAGTAATCGGTGTGTGTCACTTTTCATTAATCACACCACTTTCCTTTTCATGAAATACCAGCAGATAATTGTTACTAAATGTGATTCGCAACACTCAGTGCAGTGGTTGAAGAACCAGAAATAGGCAAACAGATAAAAACATTGTTTAGCTTGCAGGCAGCAAGTGTTTGCCATTCAGAGATACATCATGCATAAACATTGATTTAGCCATGAGCTCACACTCATAAAGCTTTTGCTGTTTCCAGAAAACCCTGTAGTCAGACGAGGTAATAGCCAAGGGCAAGCACTTTTACCTGTATGGCAAGCTTACGTTCTATTTCAGTTGCCTGGTTTGAAATAAATCAGTTTCTCAGTCTGAAATAAATCAGTTTCCCTAATGTTAGGCCACTGCGAGATTGCCATGGATTAGAATGAAGTGCACGAAACAAAATGCTTGCCTTTATAGTGAAAG----ACTCCTA---GAGGGCAGCT-TGTTGATTTTGAATAAATATTTCATTAAG chr4 - 94230402 52164184 52164183 52164925 42065478 42065477 42066219 742 TTGTACTTTAAAAACCTCAGCAACAAACAATGGCATTTTTGGTTTTTTACTCAGCCTTTATTTCAAAGGTGAAAACTGTATCGTTATATTTAATTGGCTACCTGCAGCTTGTTAGTGG---CAGTATCATTAAGTAACACTGGAACATTTGTAGTGGCTAATCTTTCAAGCTTTTAGCATTCGCGTTGACCTCGTTAAAAGTAGCAAAGGTCAGGCTGCAGTTCAACAGAGTTACCCGCTCACCAAGGAGACTAGCGTGGCAAAGTAATCTCTGTGTGTCACTTTTCATTAATCATGCTACTTTCCTCGTCGTGAAATTCCAGCAGATAATTGTTACTAAATGCGATTTGCAACACCCTGTGCTGTGGTTGAAGGACCAGAAATAGGCAAACAGATAAAAACATTGTTTAGCTTGCAGGCAGCAAGTGTTTGCTATTCAAAGGTACATCATGCATAAACATTGATTTAGCCATGAGCTGACACTTATAAAGCATTTGCTGTTTCAAGAAAGCCCTGTGGTCAAGCTAAGTAATAGCCAAGGGCAAGTACTTTTACCTGCGTAGCAAGGTTAGATTCTGTATAAATTG----------------------TCTCATCCTGAAATAAATCAGTTTTCATAATGTTAAGCTGCTTCAACATTGCCACAGGTCACGACAAAGTACACAAAATGAATCGCTCGCATGTATGGTAGGAATTGTGTTCCCATGTAAGTTCATCTATGATTATATTGAATAAATATTTCATTGAG ..:..:....x.x..:...::.:x...:.:-.x...:...x..:...x.:..x:......:.x..:........::x..:..:..x.................:...:.::.......---...:...:......x.:......:.........x:.........:.::..x:....:....x.........:......:...:x:x.......:..xx:...........x:..:.x.:.............:..:..:..........xx.......................::.:........:x..:......x........................:....:.......:.x....x..........:..........................................................:.....:..:...................................x.....:.......x...........x.....:......:....::.x.:..................:...........::.:.....x...x:....:.x.x.:...----------------------.....x:.................:.x........:..::..x.:.x.......::.:.:.x:.::....:...:...::..x:...:..x.x...:..:::.:----::...:.---:..xx..x..-..x.x..x..................:.. 30M1I87M3D466M22D104M4I7M3I10M1I29M 587/733 80.1% 742/94230402 0.0% 34/733 4.6% 129536771 60677784 +14919 chr4 + 190214555 181716758 181716757 181717246 489 TAACTTATGTATGCAGAGTTTATCAAAACAATAACAGAAAAA----------------TATGAAAAGCTGGGGTGAAAACAAGAAATTT--CATCAGTTGATATCATAA-CACATATGAATTCTCCTTTCTCCACCCCACCTCTGGGTCCGCTCCCCCAATACCTCACCAACAAAAACTGTTTCTCAGAATATTTCTTTCGGTTTGGGATTATTAGCACATATTCTTGCCAACTTTGGTGGATAAGCAGAAGCGCAGAATGTACTAGTCTTTTAGCCCCTCCTGATACTGAGTCTTAGAGCTTTGATTTGATTTTGATCCCTTAGCACATATCATGTGTTAAGGGATGTA-TGGATTTGAATCTAGAAGTTGCCTGCTGACTTCTAAGTAAACAGGAATTTATGCAGACAAGATCATTCACATAATTATTTCATTGTCGAGCCCCTTGCTGAATGGCACATTAGAAGTATGTGAATGATCTAGGAATTGAATGTGGATGCACAATTATT chr4 - 94230402 52168447 52168446 52168902 42061501 42061500 42061956 456 TATTTTATTCATTTAAAGCTTATTAAAAAGACAACTGCAGAAGTTTAAAGCTGTACTTTATAAACATCAAAACTATACATAAGTAGCTTTCCATCAGCAAACAATATAAATGTATGTAAAACTTTCTTT-----------------------TCCCACAA---------AATGAAATCTGTTTTCTATAATGTTGCTTTCAGTCTTGGATTATTAACACACGTTCTTGCTAACTTGAG-GGATAA--AGAGACGTGGCTTGT---------TTAGCCATTTCTGATACTGCGACTTAGAACTTTGATTTGATTCTGATCCCTTAACATACATCATGTGTTCAGGGATGTGCTGAATTTGAATCTGGAGGCTGCCTGCTGACTTCTAAGTAAATAGGAATTTATGCGGGCACCAGCATTCTTGTAATTATTTTGTTGAAAA----TTTGCTAGATCAC-----AGATACACAAAAATCATCTAAGAAGTAAGCATTTATGCAAATATATT ..x:....x:..x:.:..:....:....x:.:...x.x.:..----------------...:..x.x.x:::x.:x.x.:...x.::..--......:x:.:.x:....-:::..:.:..x::.:....-----------------------....x...---------..::...x......:::.x...:..x.....:..:.x.........:....::.......:.....x:.-......--...::..::.xx...---------......x:.:.........x.x......:.............:..........:..:.:..........x........:-..:..........:..:.:......................:............:.:..xx.x.....x::.........::...xx:.----:.....::..x:.-----...x::.::x:...x.....:...x.:.:::.xx.....x.xx.... 42M16I31M2I18M1I19M23D8M9D69M1D6M2D15M9D79M1I89M4D13M5D47M 312/436 71.6% 456/94230402 0.0% 73/436 16.7% 129548311 60666244 +19110 chr4 + 190214555 181739409 181739408 181739990 582 CTAAAGAACTATACTTGCTTTCATATATGACATACTTGCTTTTAAAAATCTAATTAAAACTTTCTTTTTGGTCCTTAGGTAGAAAAATGGCTCTGCTGAGATGAGCTCTTAATTAATGCACTGAGAGCCTGCAAGTCCCACCTCTCAACAGGAATGATTGACGTCCAAGGATACATAAATTACACTAACTGAGC--TCTGCCTCTATATAAGCTTTCCACATCCAACTCATCAGAGAAGCTAGGTGAGTAGACCAGCATC--AAAAGCTACCTCAGTATGGTCTATGCTTTCCCAAGGGGTGGAAGAACTTTGCAGA-CCGTCGTACATTTATTATCACAGAAGACAGTTCTTTGCTTCAGTTTTAAGATGTCGGTTTTCTTGTTGTAGGTTTTTTTAATTATAAAAATTAGCA---TTTTTAACATAGCCATTGAAATTTAAATAATCGCATTCTCTTCACAATTTTCAAGCAGCAAAAGTTGCAAGCCAATTACAGTACGCAAAAATCACTTGGCATCATCTGTTGATATTAAATTGTGTTGCGTAGCAACCGGCGCACATGCTATGGAAGGATTGTTTGAAATCAAA chr4 - 94230402 52187381 52187380 52187913 42042490 42042489 42043022 533 CTAAAGAATTAGTTTTAT----ATGTATGACATACTGTCTTCTAAAC-TCTAATTAAAACTT-ATTTTTGGTCCTTAGGTGGAATGACTACTCTGCTGAGATGAGCTCTTAATTAATGCACAGAGATCCTGAAAGTCCCACCTCTCACCAGTAATGATTGACATCCAAGGATACATAAATTACACTAATTGAGCTTTCTATTTCTACAT---TTTTCTGCAGCCAACTCATCAGAAAAGGTAGGTGAACAGACCAGCATAAGAGAAGTTATTCTGCTGTCATCTGTATTTTTCTGAGG---GGGAAAATCTGGCAGAGCTGGTGTACATTTATTACCATGGGTGTCAACTCCTTTCTTCAGTATT---------------------TAGGTTTCCTTTACTGTGAAAATTAGTATTTTTTTTGATTCAGTGATGTACACCTGAATAATCACACAGTATGCACTACTGAAAAG----AAAATATGC------TTTTCAG---------ATCATTGGGCAGTA-CTAGGGGCCCCAGATAGTGTTGCATGGGAA----TGTATGTTTTATGAATCAGTCATTTGGTATTAAA ........:..xx:..::----..:...........xx...:....x-..............-x................:...x:.:x:...............................x....x....x...............x...x..........:.........................:.....--...:::....:..---:....::..x.............:...x.......::..........x--.:...:..:::::x.:.x:...:.::...:.::...---..:.:..::.x.....-.:.x:............:..::.:x.x..::..:..x.......x..---------------------.......::..x.:.:.:........:.---.....:.:x:..:x..xx.x.::.:.......:..:xx.x.x...x.:.xxx...----....xx...------x..x...---------....:.x....x:.-..:xx.::x::.:..x.......:.:.x..----:.:.::.x:....:.xx::.::....:x..:... 18M4D25M1D14M1D131M2I13M3D48M2I36M3D16M1I47M21D28M3I55M4D9M6D7M9D14M1D30M4D34M 384/525 73.1% 533/94230402 0.0% 65/525 12.4% 129552028 60662527 +15347 chr4 + 190214555 181748650 181748649 181748925 276 TGTATATAAAAAAAGTAAGTTGTAAAAATAAAATATGTTCGATTGGATAATCATCTATAACGTTAACAGTCCAATTGCTTGTCATGTAGGGGAAGGCTGTGCTTTAATTAAGCAATAAGACATGACAGGGTGTGAATTATGGAGTAATAATTCTTGTCTAGTATATTGTTAGACAGGAGGCCGAGGGCCAGGTGTCACTGCATACACCATGCATAAATTATTATGCTGTAACTTAAAT----CTAGAATATTATAGAATAATTCTAAAA----TATTTTTCAAA chr4 - 94230402 52192250 52192249 52192532 42037871 42037870 42038153 283 TGTACAGAAAGAAA-TAGATAGTAACAATAAAATATGTTAGGTGGGATAATAATCTATTATGGTAACAGTCAAATTGCTTGTCATGTCATGAAGGGTTATGCTTTAATTAAGCAATAAGGCATGACAGGGTGTGAATTACAATGTAATAATTCTTGTCTAGTGTATTGTTAGGCAAGAGGCCAAAGGCCTGGTGCCACTGAATGCTGCAGGAATGAATTGTTAAGCTGTAATTTAAACAATGCTATATCatattataataattgtaaaaatattactttttaaa ....:.x...:...-..::.x....x.............x.:.x.......x......x.:.x........x...............x:x.:.:..:.:....................:...................:::x...................:.........:..:......:.:....x....:.....x..:.xx..x.x..:....:...x.......:.....:----...x.x:..xx..x.......x.....----..:....:... 14M1D223M4I27M4I11M 221/275 80.4% 283/94230402 0.0% 9/275 3.3% 129556400 60658155 +4767 chr4 + 190214555 181748742 181748741 181748943 202 AAGGCTGTGCTTTAATTAAGCAATAAGACATGACAGGGTGTGAATTATGGAGTAATAATTCTTGTCTAGTATATTGTTAGACAGGAGGCCGAGGGCC----AGGTGTCACTGCATACACCATGCATAAATTATTATGCTGTA--------ACTTAAAT------CTAGAATATTATA--GAATAATTCTAAAATAT--TTTTCAAATA-----ATTTTGCT-AAATAAGA chr4 - 94230402 75500968 75500967 75501189 18729214 18729213 18729435 222 AGGGATATGCTTCA-----GCAATAAGACGTGACAAGATGTGAATTACTGTGCATTAATTCAAGCCTAACATATTGTCAAGTATGGGGCCAAAGGGCTAAAAGCCATCCCTGCA---ACTCGGTGTGAATTAATACACACTAGATCACACACTTAAGTGTCTTACTGTGATAATAGATTGAATACTCataaaatgttatttttaaatatctatatattattaaaataaGA .:..x.:.....:.-----..........:.....:.:.........:x.x.:.x......xx.:...::.......:.:::.x.:....:.:..x.----..x::..x.....---..:xx.::.:.....x..::.xx..--------......:.------..:x:...x..x.--.....x.:x......:.--....:.....-----..x..::.-........ 14M5D78M4I13M3D25M8I8M6I13M2I17M2I10M5I8M1I8M 139/194 71.6% 222/94230402 0.0% 36/194 18.6% 106247774 83966781 +12130 chr4 + 190214555 181756493 181756492 181756764 272 TGCTATGTGCTCCAAGATGGCCTGTGCAGGCAACAGGAGTAATAGGAATGATTAAACCCTGTCGGATGGGGTTAGGTTTTTAGAGCTTTCTTGCCTCATGACAGGCTGTGACAGCCAAGTGGCACTGAAGCAGAACAAACTCCGATGGCAGTTTGCTGTGAGCAGTGCAACTGTCAAAACTGCTGCACGAAAGC-AAATGTTAGGGCTAACAACCAGCAAAGTTTGCAGCCTGACTACTGACATGCTGATGGCCAAAATGTCTTCACAAGTAA chr4 - 94230402 52197638 52197637 52197907 42032496 42032495 42032765 270 TGCTGTACACCTCAAGGTGGCCTGAACAGCCAGTAGGAGTAATAGGAGTGATTAAACCTTGTCACAGGGGGTTAGATGT--GGTGCTTTCTTCCCACATGACAGGCTGTGCCCGTCAAACAGCACTGAAGCAGAACAAACGACGGTGGCAGTTTGCTGCGAGCGGTGCTACTGTCAGAACTCCTGCTAGAAAGCTAAATGCAAGATATTCAGCCCAGGGAAGTTC-CAAACAGACCATGCAAATTTTGGTTTCAGAAATTTCCCTGCAAATAA ....:.:::.::....:.......x:...x..::.............:..........:....:x.x........:.x.--:.x........x..x..............x.x.:...:::...................xx..:.............:....:....x.......:....x....xx......-.....:x..:xx.xxx:x....x:.....:-..:x.x...:.:xx.x..x:..:.xx.x:....x..::::...:... 79M2D113M1I30M1D47M 196/269 72.9% 270/94230402 0.0% 4/269 1.5% 129558855 60655700 +25889 chr4 + 190214555 181757742 181757741 181758207 466 AAATAATTCATGAGACCGATGATTTAGAAGTTTCATCTCCCTTACCTGCAGCTGAAAGGGCAAACACAATCATTCCACTTTTACTATTAGAAAGAAGAACATATTTTTTAAA----GGGTAGTAAATTAGCTTGTGCTGGAAGCATCTGTTTTCTTGCCTTCATCACTGCCAACTCCCTCTGTTTTCTTTGATCTATGATTTGCAAGCTACTATTATTATTTATGTGTTCTACAATTACGACCAGTGACATCTCCCCTTCTCCAGCCCTAAGCCACAAATATGAAAGGAGTAAATGCTGTTTATTGTGACAGTCTGCCTTTTGTGTGGGGAACAATGACAAACTGTACCACTGACAGCTCGCTACTGTTTTT-ACTGCTGCTCCCCACCTCACTTCCCCAGTGCTCTCCAGAATGTGACGATGGATGGACTTGAATAAAAATGCTTAGTGAGAATCTGTTGCATTCATTTA chr4 - 94230402 52200225 52200224 52200691 42029712 42029711 42030178 467 AAGTAAGTCATTAAAGTCATGATTTAGATGTCCTGTCTTCCTTACCCTCCACACAAGCAGTTAATACAAAGTGTTCCGTTCTATTGTTATGAAAGaaaaaatattttttaaaaaaaGAGCTGTAAATTAGGTTGTGCTGAGAGCATCCATTTTCTTGCCTCCATCACTGCCATCTCCCACTGTTTTCTTTGATATATGATTTGCAGACTACTATTATTATTTATGTGTTTTACAATTACTACGAATGACACCTCCCCTTCCTCAGCCCTAAGCCACAAATCTGAAATGAATAAATGCTGTTTATTGTGACAGTCTGCCTTTTGTCTGTGGAACAATGACAAACTATACCACTGACAGCCAGTTGCTGTTTTTAACTACTGCTCTCTAGCTTAGGCTTCGAGTGTTCTTCAGAATGCTACAATAGACAGTCTTGAATATAA----TAAGTGAAAATTTATTGTGTTTGTTTA ..:...x....x.:.x:x..........x..::::...:.......:x.x:.xx..:x:.:x..:....xxxx.:.xx..:..:.:...x:..::.:..x............----.:.:x.........x........::......::...........:...........x.....x..............x...........::......................:.........x..x.:.....:.........::..................x.....x..:..................................x..x................:.............:x.:.:........-...:......:.:.x..:.xx:::.x....:...:.......:x..:..:..::.x........x..----.x.....:...:.:...::..::.... 112M4I256M1I67M4D27M 361/462 78.1% 467/94230402 0.0% 9/462 1.9% 129557517 60657038 +3864 chr4 + 190214555 181760863 181760862 181761023 161 ATTTCTTCTGACATCTTATTACCTTCC-TTACC----CTGGGTTTTAACCCATGAGGATTATTTATGCTTTCTTTGATTTTTTTCTTCCATTATCTCCCCCACCACACACATACACACACACACACACACACACACA----CACACACACACACACACACCCCGAATAAT chr4 - 94230402 80495351 80495350 80495504 13734899 13734898 13735052 154 ATTTATTCTGTCATTTTATATCCTTTTGTTGTCAGTACTGGCATCTAATTTAAACAGTTAATTTGTG-TCCCTTTG---------------TCTTTCTCTCACCATATATACACAAACAGATATGCACACACACCCAGCAGTACAGACACACACGCCCACCCCAAGCAAT ....x.....x...:....xx....::-..::.----....xx.:...:::.x:x:.x.x....:..-.::.....---------------.x.:..:.:.....:.:.:.:...x...x.:.::.........x..----:...x........:.x......:.::... 27M1I5M4I30M1D8M15D46M4I29M 100/145 69.0% 154/94230402 0.0% 25/145 17.2% 101265512 88949043 +3088 chr4 + 190214555 181767253 181767252 181767299 47 AAAAAAAAAAAAAAAAAAAGAAAGAAAACAAAATCACAGTCAATGAA chr4 - 94230402 35079911 35079910 35079957 59150446 59150445 59150492 47 AAAAAAAAATAAGAGAAGAGAAAGAAAACAAAATCACAAGCAAAAAA .........x..:.:..:....................:x...x:.. 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 146687342 43527213 +71351 chr4 + 190214555 181791771 181791770 181793775 2005 TAAAATAGTTAATTGCTTC-CAAATGAAGCTCAAATCAGACAGAGAAATG-TCTACTTTGACTAGTACCAAAACATAAGTAGGCAACGGACACTGTGTTGTTTTTGCCTGACTCTGTGGATTCTCAAGAATATTCATTTATTTAATAGGCAAAATTAAGGCATGTGTC-------CTCCAGGGACAGCCACTCTTAGGACATGTGAACAGAAATGCAATTTTCTCTCTAATTTCTTTGATGGATTCAGTAGATTCCTATTAGTCTACATGATAAGTGTTTCTGAGTTTCCGACTGCATTTTGG----CTTACCTATAATAAACCCATTCAAATAGTATCAAGTCTTCCTTTCAA---AATAATCCAAAT--CCATTGACATTA--TATTA----AATGATATTGTTGTAAGTGAAGTCACA-ATGTAACAATACAGCGTGATTTTTCTCT---------------------TAAAATTGTTAAGCTCAGGAGAATATCC--TTAAGATTAACTTTCTTAGAAGAAAAA--------TATCTCGACTGCTTGTAAATAGGAAAACA--TAAACATTCTTGTGT-ATTTTGAAGCTTTTATTTTGGCTCAAAAATGGAAGTTAAATTTTCATGAAAGTCATAGAATGTTATAAGGAAATTCTCTGAACAAATTCACAATTTACTGTTAAGCTCTTCAT-CATGAATTACGCTTAACTCAAAAGCAATATACCGGAAAAGAAGATAAAAACGTAAATAAGTCTACATTGTGGTATTAAACTAGGTCCTGTCAACATAGATTGATAGGGAAAAAAATACGTATTTTTTAGTATACAATTACGTTTGAAAATTTAATTGCTAATGGA-TTTCTGTATTCATATCAAGGTCAGATGGGCAATTA---TTTATGAGTAATCTGAAATCTCAAATAGCCTCTTCCAACAGGTTTTGTAACATCTATTTATTTTAGACAT-TTTGCCATTTCTAATGTTTCTCCCTCACAGTTTTTTTCCACAGCAGCAATGCAATACATTTTGTCAAATTTGCACTTGTTTTCAAAACCCTCCTTTATTTTACTGGAGAGCTTGCAATTAACCCACTTCTCCCTATTGAGCAGCATCTCTGTAATAACAGCTTTCCTGGCTGAGCTTTTGTTAGGGAGATTTTCAAATCAAGAGCCCATAAAGGTTGGAAAAAATCCAGTCATATTAAAGTTCAGCAAATCTCTTTCAAGGTCATAGCCCTTGAAGTTATAGACGGTTTTTTTTTTCCTGGAAAAGACTGCCAAGT----CATTTTC-----CACATTAAAAA----------AATAAATTAAGACAAACACTGTT--ACCTGTTTTACCAAATGTTGAGAGAGACGCTAAGATTTTACTTCTTCCAATGAATTGACAAGGAAGAGATGTTCTGCTCTCCTTGC----------------CCCTTTGAAGCT---------------------------TGGTAGCAGGAAGGGTGAGACTTCTGTAAACTGCGC--TAGACTCATTCATGCATCCAGGGCTGGCCGGCGATCCAGCTGCATGAAAGAGCTTAATAGTCAAAGGCCATGGTAATTCCCTCCATCTGCCTTTTCTTTCTTCTAAGGCAAAATCTTCACCTGGTGTTTTTGATTCATGTGTTCTAATTATGATGGCTGCCATCAGCAGCCCTGTGGGTGACACCACAAACTCGCTGAGCCCACAGAGCATGCTGAGGCTTGTTAAGCGACCATGTCAGCCTGATTTTAGGGCCCATTTTGCAGCTCTCCACAGGCCTATCTAAAAGCATCAGGAGTCTCAGTCTCGCAGGACAAGTGCATTGTCTTTCTAAATGTCTCTTCCTGATAAGCAAATCCAAATATGGTTCATTCACTGTGGCTTTGAAGGCACAGTAGGGAACTTGGCTTGCATGGTGGATACAACAAAATGCTTAATATTATCACTTGGTATAGAGCTAAAGAACTCAATTTCCAATTCCAAGATGAAAACCTTTGCTCCCCAGCTATGATCAAGAGTTTGAAATTTAAATCAGGAGTCTT-GAAAGCTATTCTAACTCTCAAAAGGGCTGGCTTTCCCATAC---ATACAAAGAAGAAAATGCTGTGCTTG chr4 - 94230402 52210547 52210546 52212582 42017821 42017820 42019856 2036 TACATTAGCCAATTGCCTCATAAATAGAGCTTAAAATATAAAGAAAAACAATCTACTCTGCTTGGCATTTGCACAAAAGGAGGCAAAAGCCACT-TCTTAGTGTTGCTGAAATCCAGTAATTCTAGAGTGTATTTGTTCACTTAATATTCAGTATTCTGATTTTTTTTTTTACCTCCCTAGAGTCTACTTCATTTAGATCCCATGAACAAAAACAC----------CCAACACCTTC------TTCATTAG--------CACTTAAAACAGTGCATGTTTC----------ATCGCACTGTTGTCATCTTAGCTGCAATA------TCTGGATTATATTTTCTCTTTCTTTAAATTAAGTGTTACAGATGAATATTGGCTTCAAATACTACAGTAGCGTTTTTTTTTCTAGTTATTTAATATATATAAC--TGTTTTGTTAGCTTTCTTTGGCTAGTTTTAAACTGATCTGTAAAATTATTTACAGCAGTAACATCCCCAGTGAAATTTTATTATCTCAGGGGATTCAGGGAGGTTCACTTCAACTGC------ATAAGACACCAGGTGAAGGGCATTGTGTCATTGTGAACCTCATCTTTT--CACAGCATTCCATTTCAAATTTTGGAGCGAAATGAAGAATGTTCTAAGTAAC-------AGCATAGGCAGA------TATTATGTTCTTTATTCGTGACTTTGG---GAGTAAATTGCAGTGTG--GGAAAAGTGGCTGAAAATATGGATAAAAGTCGAATGCAGGATTACTGTAGACCCTGTCAAAATAAAT-----GGGAGAA-------TATTTTTTAGTATGTAATTAAATGTCAAGATTTGTGAGTTAATGGAATTTCTGTAGTCACATCAAGGTCAGATGAGCAATTACTGTTTATGAATTATCTGAAATCTTGTATAGCCTCTTCTAGCTAGTCTTAGAGCATCTATTTATATTAGACATCTTTGCCATTTCTGATGTTTCTCCCCCATCGTTTCTGTTAACAGCAG---TGTGGTGCATTTTGTCAATTCTGTACTTGTTTGCAAAACCTTCTTTTATTTCACTGAAGAGCTTGCAATTAGCCCACTTCTCCCTATTGAGAAGCATCTTTGTAATAACAGTTTTCCTGGCAGAGCTTTTGTTAGGCAGATTTTAAAATCAAGAGTCTACAAAGGTTGGGAAAAATCCAATCATACAAAAGTTCAGCAAATCCCTCTCAAGGTCATATCAGTTAAGATTACATA-GATTTTCCACTTC--AGCAAACATTA--GAGTTCAGCATTTCTAGGGACATATTCAGAGGGCTAGAATTAATGAAATAAACCAATTCCTATCTGAAATTATTTGCTAAAC--TGAAAGAAAACTCTGGAGTCttttttttttatttatttttttaGTGGGGTTACCTTTCTCCCCCATGCAGCCGCTTGTATTACTTTCTTTGAAGTTGTTGGCAGTGTTTGTTCTGACAGCCACTGGGTGTGGGAAGTATAAGGCTATAGCAAGCATCTCCATAGCATAATCCGACCAGGCACTGCTGGTCACTGATCCAGCTGCATGCAGCCGCTTACTAGTCAAAGGGCATGGTAATTCCCTCCTTCTGTCTTTTCTTTCTTCCAAGGCAAAATCTTCACCTGGTGTTTTTGATTCATGCATTCTAATTATGATGGCTGCCATCATCAGCCCTGTGGGTGACACTAGAAATTCTCTGAGCCAACAG------------CTTGTTAAGCGACCATGTCAGCCTGATTTTAGGGCCCATTTTGCAGTTCACCGCAGGCCTATCTAAAAGCATCAGGAGTCTC-GTCTAGCAGGACAGACTCATTGTCTTTCTAAATGTCTCCTTCTGATAAGCAGATCCAAATATGGTTCATTCACTGTGGATTTGAAGGCACAGTGGGGAACTTGGCTCGCATAGTGGCTACAACAAAATGCTTAATATTTTCACTTGGTATAGAGCTAAAGAACCCAATTTTCAATTCCAGGATAAAAACATTTACTCCCTGACTATGATCAAGAGTTTGAAATTTAAATCAGAAGTCTTCGAAAGCTATTCTAACTCTCAAAGGAGCAGGCTTTCCCATACTTAGTACAAAGAAGAAAATCCTGGGTTTG ..x.x...::......:..-:....::....:...x:.x.x...:...::-......:..x:.:.:.::x:x...x...x......x:.x....-.x..:x.x....:x:.x..::xx:.....x:..x:....::..:.:......xx..:x...xx.::x.x.x.:-------.:.:..:.x.x:.:x.x:....:x.x::......:...::.----------.:..:x:...:------....x...--------:.x.:x.x.:::.:x:......----------.::...:.x.x.----....x..::....------.::::..x:...:xxx....:....x..---.:.:x.x..:..--x:....:.x.:.--..:..----.::.x.x..x..x:x...x.xx.x.:.-..:....--.::xx:..x.x:.....:.---------------------.......:..x.xxx...x.:x..x:..--.x..:x..x.:.x...:..::..xxx.--------:.::..:.....------...:..x.x..--.:..x:x:x......-...x....x..:x.x....--.x..:x.x.xx.xx.:.......x:x.x:.:x::x........x....x..x-------.:..x.xx..x.------.:...x.:....:..-.:...x..xx.---:.x.x..xx...:.:.:--.......x:.x.:....::.::....:xx.xx.x..::.x....xxx...::........x...:..-----....:..-------.............::.....x:.x.x..:....:xxx.:.......-........x...:..............:.......---.......:.x...........::x...........:.:.x:..:..:x.:...........x........-............:...........:..:x....:.x.:x.......---..:::.:...........x.:..:........x.......:..:.......:....:..............:...................x.......:...........:.........x..............x.......x..........:.:.:.........:.........:.....:x...............:..:...........x.xx..:.::...:.x.-.:....::x:...--:.x...x.:.:--:...----.....::-----..:...x.:.:----------...:..x...:x...x:x..:.:--.xx.xx...:.:...:--...:...:.xx::x:..x.:.x:..:..::.x.x.x..xx:x..x::.:xxxx:.:.x::.:..x...----------------::........:.---------------------------...xx.::.....x:.:..:..x:x.:..:.xx.x.--...xx.x..:.:xx..xx..xx.....:.:x:..............x.:xx.....x..........x................x....:.............:...................................::........................x..................:.x...:..x.......x....------------..............................................:..x..:.............................-....x........:::x.....................:.:..........:..........................x..............:............:....:....x.....................x........................:......:........:...:.....x...:.....:::..............................:......-......................:.:..x.............---:...............x...x.:... 19M1I30M1I43M1D73M7I41M10D11M6D8M8D22M10D12M4I13M6D28M3I12M2I12M2I5M4I27M1I7M2D19M21I28M2I27M8I12M6D11M2I15M1I19M2D52M7D12M6D15M1I11M3D17M2D67M5D7M7D46M1I35M3I70M1I46M3D234M1D13M2D11M2D4M4I7M5I11M10I23M2I16M2D68M16I12M27I36M2I206M12D82M1D239M1I41M3I26M 1412/1901 74.3% 2036/94230402 0.0% 239/1901 12.6% 129581224 60633331 +26484 chr4 + 190214555 181799104 181799103 181799710 607 AAACAATAATTCCTCAAGGGAGATGACATAACTGCATTACTGATTTCTCAGTTTTTGAGCAGCAGCAATTAGATAAACCTGAAACGAGTGGCTGTAATCCTCAAGGTTGGATCTGATTAATAAAGCGAGTGATAGCCTGCTGATTCTAAAATAAAAAGCTAAATAAATACATGTTGCCATTTTCAGCAATGAAGTAATAAGCAGTTTGCAGTAAATGTGATTGGCATAAAACAATGTAGAATATAATGTCAAATGCATTCAGGAAACAGC-TATTGCTGTCAAATTTGCAAAATAGGATGGTGCTTCCACAAACGTATCTATAATTTAAAGCTACTGAAATAAGTTGGCGGATATGCCAACAAATTATTCAAGCCACATTTAAATTGTGTACCTAACT----CCTCAATAGC-ATATTTATTTAATCAAAGCATGATCATT-TCTTACAATTACTGTTATAAACTTTTATAAAATATACCAGAAAATAGCAGCAGACATGTATTACCTAAGTCATATAAGCACTGAGAACGCTGACACAGCTATTCAAAACTGCAAAGGAACAGAAAGAGGCTAGCGCATTAAGACACCGCCAAACACTTTCTTAGCAGGTAAA chr4 - 94230402 52216136 52216135 52216739 42013664 42013663 42014267 604 AAAAAGCAACTCATCAAAGATGTAAGTGTAACTGCATTACTAAGTTCTT--TTTCTGAGTAGCATCAATTACGCAAACTTTAAACTGGTAGCTGTAATCCTCAAGGTTGGGTCTGATTAACAAAGCAAGTGAAAGTCTGCTGATTCTAAAGCAAAAAAGCAAATAAATACATGTTGCCATTTTCTGCAATAAAGTAATAAGCAGTTTAGAGTAAATGTGATTGGCATAAAATGATCTTAGAAATAATGTCAAATACACTCATGAAACAGCTTATTGATGTCAAATTTGCAAAATAGGATATCTTTTCAGCATATTTATCCACTGTTTACATCAGTTAGAA-----TGACAGATACAGAAACTATTTATTCATGACAAAATTAAATTATGT-CCTAACTAGTAACCAAATAGCAATATTTATTTAATCCAAGCATGATCATTATTTGGCAATTACTTTTTAAAACTTACATAAGATCAAATGGATAATATCTGTACAATTGTAATCGCTGAGCTGTGCAAGCAATTGGAAAGCTTATGCAGCTATCCAAGGGGGCAAAGAACCAAGAAGAATTTGGCCTATAAAGTAATCGT--AATACATACTTAACTAATGAA ...x.::..:..x....:.:x.xx::::.............:.x....:--...:....:....x......x::....:.x....x:..:....................:.........:.....:.....x..:..............::.....:x:........................x.....:................:x......................::..x.x::.x............:..:...x........-.....x......................:x:x:...x:..x.:x....:.:x:....x.x.x::.::..-----..:.:....::xx...x.x.......x.x..x.x.......:...-.......----x.:x......-..............x.............-.:.x:........x..xx......x:....:..xx.x::..x....x.x.:.x.xx....x.xx..:..:::.::.....x.x:...x...x.::.......:...::xx......:.x..::....:x:.:..x:..x...xx.:..:--..:..x.x....:.x::.:.. 49M2D219M1I69M5D45M1D7M4I10M1I28M1I149M2D21M 441/597 73.9% 604/94230402 0.0% 17/597 2.8% 129582968 60631587 +16505 chr4 + 190214555 181801938 181801937 181802347 410 TGACAGAAAAATGCCCAAGCAGATTTTTTTTAAAATGTACCTTCTATTGTACCCTGTTGTCTTAAAGAAGATTCAGTTCAGTTATCCAAGTGAGACACTTTAGTTTTGATGGTATGTACATGCTGATTTACCACCAGGATGGCCGGTTCTTGCTTGGTTGTAAAATTATGGCACAAATACTTTTCATTGATCGCAGTTTAACAGCCA-ATCAAGGCACAGCTTC-ATCCCACGATTTCACTGTGCCTTTACAATTGAGAAGAATAGCAGCTATAATGGGTACTATTATGGCTATTGTGTTCCTGGGAGATGAACTCAGAGATGGTGCTGGAGCAGGACAAGTTATATAAATGTCTTCAGCCA--AGGACATTACAGAAAGAATTATGTAACCTCACAGGATATAAAGATTTTGC chr4 - 94230402 52218863 52218862 52219255 42011148 42011147 42011540 393 TGACAGAAAAATATCAGAATAG------TTCA---------------TGCAGCCTTTTGTCTAACAAAGGGAGCATTTTAGTTCTCCAGGTGAGATGTTTTAGTTGTAATAGTGTATACATGCTGTCTTGACACCAGGGCAGCCATTCCTTCCTTCGTTGTTAAATTATGGCACAAACATTTCTCATCGATTGCAATTTTACAGCCATTTCAAGGCTCGGCTTTGGCCCCATGGTTTCACTGTGCCTGTACAATTGAGGAGAATAGCTTCTGTGATGGGTACTATTATGGTCATTGTGATCCTGCGAGGTGGATTTGAAGGCTCTACTGAAGGTGGGCAAGATGCATGAATGTCTGTGGTCCTTTGACTGTTGCTGACAGATTTTTGTGAACTCCAAAGATGTGAAGAATATGC ............::.x:.::..------..:.---------------..:.x...x......x.x.:.:.:xx..x..:....x....:......:::.......x.:..:..:.:.........x:..:x.......:::...:x.:...x...x.....x...............:.:..:....:...:...:...x.......-x.......x.:....:-::....:.:.............x..........:........xx..:.:................::......x.....x...:..:.:.:::..::xx.:...:..xx..:....x.::..:.......x::.:.x--x.:x::..:.x..x...x..x...:.x...xx.:...:.:....x.x... 22M6D4M15D160M1I16M1I137M2I50M 279/389 71.7% 393/94230402 0.0% 25/389 6.4% 129583075 60631480 +3284 chr4 + 190214555 181804030 181804029 181804084 55 GGTAAGGGAAGGAGGAAGGGAGGAAGGAGAGAAAGAGAAAGGAAAGAAAGAAAGA chr4 - 94230402 19799668 19799667 19799722 74430681 74430680 74430735 55 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA ..x....:..:...:x.....:.::....:.:....:........:...:..:.. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 162004362 28210193 +3144 chr4 + 190214555 181804114 181804113 181804189 76 GAGGGAGGGAAAGGGAGGGAGGGAGGGAGGGAGGAACCAAGGAAGGAAGGAAAGAAGGAAGGAAAGAAGGGAGGGA chr4 - 94230402 5084196 5084195 5084271 89146132 89146131 89146207 76 GGGGGAGAAATGAGAAGTGAGGGGGGAATACTGAAACAGAGGAAGCCATGGGAGAGGGCAGAAAGGAAGGGAGGGA .:.....::.x::.:..x.....:..:.x:xx.:...x:......xx.x.::...:..x..:..:........... 76M 50/76 65.8% 76/94230402 0.0% 0/76 0.0% 176719918 13494637 +19348 chr4 + 190214555 181807834 181807833 181809165 1332 GAGTCCCTGTGGCTTCAGCCATTCAGTAGAA---------GGATATTCAGAAACTAGAGGAGAACTATATCCCATAATCCTCTAGGGGAAGTGACTCCATGAGACAAGGATGTATTTGTGGCTAACAAGATACAAAGGGCAGATTTTTCACTTCCTGATGTAAACAGTTTCAATCTA-----GGTGTAGCATTTCCCATGGGAGCTCCCTAAATATTTTAACAAAAGGAT---GAGAACACTGAGGATAGAAAATCCACCACTGCCTTCCAGTGCCTAACCACAGATAAAAAATTGATTACACTTCTGTTGGTTTGAGAGGTTTCCAGATAACCATTTTTTATTTCTAAACTGCGGCTGGTCATTGAAA----------TTGTAAGCGGATGTCATGCCACCTACATTGCAGCGAGGTACCATAGCAAAATCAATATGCTATATCTCTTCAT-TCACAGATGTTCATGGATTGGAGCATATAGATAATGAAGTTTATTTATTCGAGTAGACACTGCTGTCACTAAATAATGGGTCTCAAATAGGTTTTTGCTGCCAAATAGTTTGATGACATATGGCATTTTCAGATAGGTCATTATATTACTGATTGAGGAGCAGAGCAATATTTAAATAGGAAAAAAATTCTAGT----AGAAGCATTCAGGTT---GGGCAGCCT-------------------------GGAGAAGGATACTTTCTGTAATCTATCTTTAAA--AATAAAACCTCAC--------TGGCAATCCG-----AGATGTCTACCTATCTAT----TTTGTCTTGCATCTACAGCAAGGCACATGC-----TCGAAA---------TACAGAAATTTATTTTCTTAAACA--------------------------------------------GCTAGATGCCTGC--------CTACATATTCCCTTCAA-TTCATA-----------AAGAAAT-----------TGCATGTGAA---------------------AAT----GGGATACAAGCCAGCGAGCAAGTGAGCAGCTCGGA---------AGTTGAATGTATATTGGT-----ATGAAATTTGAAAACACACGTGGGTTGGCTCTAAAACACTTTTTTTCCACAAACCACAAAATGGAATTCTATTACGATCACATACTGGGTACACACAAGGAGG-TATACTTGCTTCTCAGGGCTAAAGGG-CATTCAACAGCTACAGGACAATACGTCCCATCATCTTTTTCACTAACAGGTGAAGGGTATTCTAGATGAGATGTGTTAACAATTGGACAAGGAAGTTCCTATTAGCATGTA---AGCAATTTC-TGTTTTGCAAGCGGGGGTACAAAAGCCACGCCAAATATTTGACATACACCGGAGAGAAAAATACTCAATCTGGAAGTTACTGTTGATGTGGCTGATAAAAACATCTTGACATTTGAGTCTTTTAACTGCCAGTTGATCACAGGAGTGGCTTCAATGATTAGTTCACTTGAAGAAGCTCACAAAGAAAGAAGTTAAAG chr4 - 94230402 52221544 52221543 52223007 42007396 42007395 42008859 1464 GAGTCCCTGT------AGCCATTCAGCAGAGCTGGGCATTGTGTGTTCAAGAATGGCA------------CCAGGAACCCCCGTGAGGAAGTGACAGGATGAGGCTAGGAAACCTTTGTGACTAATAGCATACAATGAGC-GTTATTTTGCTTCCTAATGTAAACAGGTTCAAATTATCCATAGTATAGCATTTACCCCGGGAGCCACCTAAATATTTTAACAAGAGAATTGTAGAAACAT----GACTGAAAGTTTACTG-TGACTTCTAGTGTCCAACTACAGATAAAAA-CTGATCACAATTCTGTTGGTATCGGAGGTTTGTAGATAACAATTTCTAAGTTCT-------GGCAAGACACTGAAAACACAGCACATTGTAATAGGTTCTTGTG---------TTTTAGAGGCAGTCCATAGTAAAATTACA--GCTTTACCTCTTCATAGTACTGACTTTCATATGTGTATGTAAATATAGAACAGATAATATTTAT---AGTACCTCGTACTGT---GGAAGAACAGAACTTACATATAATGTCACTGCTAAAT-GTTTTCTATC------CATTTT--GATGCGTAATTGTTTTTCTGATTCCATAGCATTAAGGTATTTTGG-AAGCATGTAGTGCTAATTCACAGTGGTATTTAGAGTATAGCGCTGCCTCATCAGCTGTAATTGAACTCATCAAAATGCAAAGTAATTTAAATCACATACATTTATAGGAATGAAAATACATATTAAACATATGAATACATAAGAAAAAGtatatttatatataatatttatGTTCTCAATACAGACAGAGAAATTTCTGTGTTGCAAGTATTCTTTTATAAAAGTTTGCCTTTGAAAACACGTTGCCTGTTAAAAGCAATGTGATCACCCAGTGCTGATTTGGAGCAAAATGCCTGTGATAAGTACTTCATAGTACTTGCAAATTCATATATGTCACAAGAAGGAATGCTGGATATTCTGGAGGTGAATTACTGGTTGAACATTGCCATAATTCTGGATGCACATTTCTCTGAGCTTAGGAGAAGTTGGGATCATATCCAAACTCTGTGTGTGTAGGTCTTATATGAATATAAAATGCACAGATTGTATAGAAAGGAAAAAATGCTTTTGTAAACAC----AAATGGAAATCTCTATGAATCTCATCTTGGTTACACACAAGGGGGGTGTATTCTCCACTGAAGTCTAATGGGATGTGCATCGAGGGGAGAATAATATGCGCCATTGCCTTGTTCACTAACAGGTGAAGGGTAATATAGATGAAATTGGAGAACTAATAGGCAAGACAGTTTACATTAGCATATACAAGGCAATTCCACATTTTGCAG---------CAAAGTAAAAGCAAAGTAGTAG-CACAAACCAAGGA----AAGATTAAGTCTAAGCCCTGCTGTCGATGTG----ATGAAAACAACTTGACATTTGAGTCTTTCAAGTGCTGGTTTATCACATGAGTGGCTCAAATGATTACTTTCTCTGTAGAGTCTAACAAAGAGAGAACCTGAAG ..........------..........:...:---------.x:.:....::..:x:x.------------..x:x..:..:.xx.:.........xxx.....:.x....x::x......:....:.:x......x.:..-.x.x...::......:..........x.....x:..-----:..:........x..x:......:x.................:..:..---:::....:----..:x....:.::..::-..x....:....:.:...:...........-:....:...x..........x.x:.......x:.......x....:.x.x....-------...x:.x..:.....----------......xx..x.x.::..---------..x:..x.:x:xx......:.....:.xx--...x..:........-x:..x..:x.....:x:.xx:x.:.x...x.x..:::.xxx.......---....xx:xx.:....---x:..x..::.:x..:.x...x:x.x.::....:....-....xx.:x.------......--...:x..x...:.x..x......xx:x....xx:x::.....x::-.:.x.x:x.:.x...:.----..x:.:...:..:x.---.x..x....-------------------------::x.x.:::..x...xx:.x.:x..:x....x.--...:...x:x..:--------.:xx...x.:-----.:.x..x..::...x...----...:.x..x:xxx.....xx..:x.x..x:-----.:.x..---------..:.:..:...:::..:xx.....--------------------------------------------..x.:.......:--------..x....x.x.:.x...-......-----------...:...-----------..x.x.....---------------------...----.:x::...xx:.xx:....xx:x...x..:.x...---------.::.xx:...:.:.x...-----.....xx.x:..x:....x:.x.xx.:.xxxx:...x.x.x:....x:.x.x..----........x...x.xxx:...x...x:...x...........:..-.:..:.:x.:x..x.:.x....x...-::.x..x.::xx:x..:.:....:.:x....:::...x.....................x.x.......:..xx.xx...x.x.:.:....:x....:x:........:..---:......:.-::.......:---------....:xxx.x..x..:..x.x.-..:.x...:::..----..x.:.x.:...:::xx:.:....:......----..:......x..................:..x...::...x......x........:x........x..:x::..x...:x..x.......:....x:.:... 10M6D15M9I18M12D70M1D36M5I48M3I8M4D16M1D30M1D54M7D15M10I18M9D29M2D15M1I48M3D15M3D37M1D10M6D6M2D45M1D17M4I15M3I9M25I33M2I13M8I10M5I18M4I30M5I6M9I24M44I13M8I17M1I6M11I7M11I10M21I3M4I35M9I18M5I54M4D45M1I26M1I111M3I9M1I10M9D22M1D13M4D31M4D103M 835/1251 66.7% 1464/94230402 0.0% 294/1251 23.5% 129586290 60628265 +30730 chr4 + 190214555 181823501 181823500 181824103 603 TTTGAGTAGGAGTTACAAAGGCATCAAGAGGAAAATAAGGAAAATAGTCACTTAGATCTCTGTTTTGATTGGCTGAACCCCTTTAAATAATTTATATATGACTGTAATCACAATATTTCTTGCCTGATGAGCTTCTATACTTGAAGCAATGATGGGGGTAAAAACCAATACACTAAGTTGTTGATAGTAACCCCTGGGGAAAATATTTCTCTACTAAAGCATTCTTACTATAAGTATTGAAAATCTGGAAATGTAACAACAAATTGAAATTATGAAACCACTGAAGGAAACTATTGCTTGTAATCGTCGCTGCC--TTTCTCACAGCTTGACTCGATGACAGCTTGATAGGTTTACTGCAGTTGGCATTGGATTGCTTTGGCT-CACTAAATGGCAGCTATCTCATATGCCCTTGATTGTGCACAAATTAATCAAAGGCTTTTGAAGTGATGGCTTTTGTGTACAGGGAAAACAACATCATTTTAAAAATTGGTGCATCCTAAAAAGATACAGATATATGAAGACACT------TACAGTTCCTGCTGAACATGCTGCTCAGTCTTACA-AAGGACTTGCAACTGGGAATTTTTCATATTTTTCT--AATAATAT chr4 - 94230402 52231152 52231151 52231730 41998673 41998672 41999251 579 TTTTAATGGAAGTTACATGCACAC---------ATCAAAGAAAGTAGATGCTTAGATATCTGTTTTGATTGGCTGAATCTCTTTAAATAATTTATATATGACTGTAACCACAATATTTCTTGTCTGATGAGCTTATATACTTGATTCAATGACGGGGAAAAAAACCAATAGGCTAAGTTGTTGATAGTAACTCCCAGGGAAAATA-TTCTACACTAAAGGATTGCTACTCTAAGTATTGGAAATCTTGAAATGTTACAA-AAATTGAAATTATAAACCCACTGAAGGAAACTATTGCATGTAATCACCATAGTCTTTTTCTCACAGCTTGACTCTATGACAGTTTGATGGGTTTATTGCAGTTGGCA-TGGATTGCTTTGGCTGAACTAAATGGCAGCTATCTCACATGCCCTTGATTGTGCTCATATTAATCAGAGGCTTTTGAAGTGATGGCTTTTGTGTGT----------------TTTTGAAGAATGATGCATTTTAAAA----ACTGGTGTATTGATGCATTTTAAAATAAAGGTATTGCAGTAAA----ACCTAGATTTCCACAATGAAATCCTACTGGGAATTATCCACTTCTTTCTTGAGTAACAT ...x.:.:.:.......x:x:..:---------.x:..:....:...x::.......x...................:.:...........................:..............:...........x.........xx......:....:x...........x:...................:..::.........-....x:.......x...x:....x.........:......x.......x....-.............:..x....................x.......::.::x.:.--..................x.......:.....:......:...........-...............-x....................:................x..x........:...........................::----------------....:..:.x..:.....::.....----..x.:.:...x:.x:..:.------..x..x.x:...x.x.x.----:.::..x:..x..-..x..xx.x.x..........x.:..:x.:.....--.:...:.. 24M9D172M1D53M1D54M2I51M1D15M1I80M16D25M4D19M6I18M4D13M1I35M2I8M 467/567 82.4% 579/94230402 0.0% 48/567 8.5% 129592349 60622206 +3186 chr4 + 190214555 181836145 181836144 181836207 63 CTGATCATGTTTGCTATACACTG---TTTTCATACACACATGCACACACACACACACACACACACA chr4 - 94230402 66904816 66904815 66904881 27325522 27325521 27325587 66 CTAATCTTGCTGGTTTCGCACTGCTGTTTTCATATATGTACGTACACACACATACACACACACATA ..:...x..:.x.:.x::.....---........:.:::.:.:.........:...........:. 23M3I40M 47/63 74.6% 66/94230402 0.0% 3/63 4.8% 114931329 75283226 +20557 chr4 + 190214555 181844729 181844728 181845127 399 AATAGGAGTTTCAGATACAAGTGGAAAATTATGACAATCTCCCAAGATGCTCTTCGGGGTAAGTGGAATCTCCTCAGGAACCACTTCCCAGATCAATCTAGCTTGTCCATAAAAA-CGCATTTAAATGGTCCTCCCTCAGCCTGCTGCTAACAGTTGTACTCTTACATTATGTATGAGTCTTCG----CTTGTTGCATGAACAAACTGCATAGTGTTCCATTAGTGATTTTCAATTTCATGCTAAGCTTTGCAATTTATTAGTGTTATTTAAGCTAATGTACTATTATTTTGCATATTTTATA-------TAATTTGTTATTCATGCAATGTGATATTTAAGTATTGGGGATCAATAAGTCTACT--TTGTTTCTAAATTTGTATAATTAAAGACATTCAATTAAATATCCTA chr4 - 94230402 52240420 52240419 52240830 41989573 41989572 41989983 411 AATATGTATTT--GATGCAAGGGCTAGACCAGAACTCACTCCCAAGATGCTCTTCGGGCTAAGTGGGATCTCCTTAGGAACTGCTTCAAAGATCAATTCCTCTTCTCCATAAAAAATAAGTTTAAATTGTCTTCTATGAACCTGCTGTTAGCAATTGTACTGTTACATTATGTATGATTCTTTGACTGCTCATTGCTTCAGCAAACTGCACACTGCTCCATTAGTGATTTTCAATTTCATGCTAAGCTTTGCAATTTATTAGCATTGTTTAGGCTAATGTACTATTATTTTGCATATTTTATATCATATTTCATTTGCTATTCATATGACCTAACAGTTAAGTATTGGGGATCAATAAGCCCTCTAAGTGTTTGCATATTCATATTAGTACAGTCACACAGGGAAATAACTCA ....x.x:...--...:....x.xx.:.::.x:..xxx....................x.......:.......:......::....xx........::xx...x..........-::x:.......x...:..:x.x.:.......:..:..:.......x...............x....:.----..::....x.x.:.........:.x..:..............................................::..:....:...............................-------.x.....:.......:::.:x.:.:.x......................:.:x..--x.....x:.x...::...x.x..x..x..:x..:xx.....x.::. 11M2D102M1I68M4I115M7I55M2I46M 311/397 78.3% 411/94230402 0.0% 16/397 4.0% 129604309 60610246 +16598 chr4 + 190214555 181849381 181849380 181849832 452 TTTCATAAAATTATATTGTTGCCCCAACAGAAACATTTTCAGCAATGATGA-----------GCAAAGTCATTTTCCTATTGTTGTCACAATAAGTTGTCTTTAA-----AAAAATCTCTAGAGAAAATGATTAATTAGATTTCAATTATGCTGCAGAAAAAAATGTACTTTACATACTCACACACTAAAAAGCATTATAGTATTTCTTTAATGTGTTTAAAAATTCAAAAATGTTTTTAAAAGCCACTTAAAAAGTCAAAGCAAAAGCAAGCTAATGGAAGATGGTGTCATCCTTCAAGTTGATGTATGTTGAGTTTCCCCCACGTCCTTTTGTATGACATTATACAGACATCATTGGAATTTT-TCTAAATTATCTTAGAAGATTCTGAAAT--ACCCATTATGATCTGCTGACAGACACA-AGGATAATCTCTATAGTTCTGC-CATGGATTGAATGAAAGACCAAAATT chr4 - 94230402 52246122 52246121 52246573 41983830 41983829 41984281 452 TTTCCAAACATTCCTTTGATGCTCCAGAGGAAATACTTGTA--AATGGAAATGCCTCTTGTTACTGAGTCCTCTTCCTATGGTAGTCAC-------TACCCTCAACTCTAAAAGATCTCCAGGGGAAAAGATTAATTAGGTTTCAATTATACTGCAGAAAAA--TGTACTTTACATACTTACAGTCTGAAAAGCACTGTGGTGTTTCTCTAATGTGTTTAAAAATTCAAAAATATTTTTAAAAGCCACTTAAAAAGTCAAGCCAAACTCAGGCTAATGGAACACGGTGTCATCCTTGAAAGTGATTTAT-TTGCTATTCTTCCAGCTC--------TCACGTTATGCAGATATTGTCTGAATTTTCTGTGAATGATTATTGAAATTTTTCAAGTAGATTGATCA-AATTTGTTGATAGATGCAGAGGATTATTTCTGCAGCTGTGCACGTGGCTTGTAAAAAGAAATAAGCTT ....xx..x...x:x...x...:...:x:....:.:..x:.--....:x:.-----------:.x:....x.:.......x..x.....-------.::.:.:..-----...:.....:..:.:...x..........:..........:...........--...............:...xx..:.......:.:.:..:.....:........................:..........................:x....xx..:..........x.:............x..:x....x...-...xxx...::...xx..--------.x..:....:....:..::.:x.......-.x.:...x..:x.x...:x..:.x..:.--.::x..:.-:..:..:...:...::..-.....x..:...::..:.x...-.:...x...x.x:..::.x:..:x.. 41M2D8M11I27M7D9M5I52M2D145M1D18M8D29M1I28M2I8M1D18M1I22M1I26M 321/431 74.5% 452/94230402 0.0% 42/431 9.7% 129603259 60611296 +38416 chr4 + 190214555 181853762 181853761 181854788 1027 GGTCCCGGAGGGTTAAGAGGAGGTGCTTTGGCAGATTGCTCTGCCCAGCATGCTGTAGTAGCCCTTTCCAAAGCATATTGGCAAACTATGCTGAACGATCTTGATAAGGGAGATTTAATTAAAATGCTGTAAGCGTAAGATCTCTGCCTTCGTGCTATAGAAGA--TTTTGTTGAAAGA-ATCTTATTACAAACCTAGCAGGATTTTTTAAATGTTTTATTCACTTGTAGCCATCCCACTGATTA-----CAGTTGGAAGTATAACACAACCAGTTGGTTCTTAATAAGGGCTTTTAAAAATCACAGCATGTTCTTCAGTCCCTTAGT---ACAGGATGAATGTGACATCAGGGACACAAATATCATTACCTTGATAAATTACTGATGGCATAATGATTATGGAAATCGTCATCCACTGATCATCAGTCACAATTTATTTCAAATCAATGTCTACAATTTGTAGCCTGGATGGAAGTTTTATCAAAACCCCCTCTGGTATAGTACAGCTCTTGGTAGCTAACTTCCTCCTAAGAGCATTACAGCCTTGTCATACTTCATCTGCTGTTCATGAATGGAACCACTCAATGATTCCATGGCCTCAAGCAATCCGAATTAGTCAGAAGAACACTGGGCTACCACACACTCATAGGCAAGCTCGTTCAGAAAAGCAGTTAATTTAAGAACCAGCAAATGTGCCAAACTACGGTATCTTTCCCTAGACACAGAGTTTCCCATTTTTTTCCCCTTTCCAACTGGCAATAAATGGTAATGTTTGACTTTACTACACTGTTAAATTGCAAATAAATTGTTGCCGAATCATGCCATAATAGACGTTTATGTCTTTAAAGCAATCTCTGTACCAGGAAACATAATCTGCATGCCTTTGT-CTGAGACTTGGTAGTGTTCCATTACTCTTTTCCAACACATTTAACATTTCAAGTAATTTTAGGTCAGTAGGGCCCAAG-AAGTCAATCCCTGTGGTATTCTTATGTAATATTTTTCTACTTTTTAAATTGGTCATCATTTATGAAGGATCA chr4 - 94230402 52249875 52249874 52250818 41979585 41979584 41980528 944 GGTCTAGTAGAGTTAATACGAGCTTCTTTGACAGATTGCTTTACCCAGCAAGTTATTTTG-----TTCCAGAGCATACTGGCAAATTATTCTGAACCATCT-GATAGGAAAATTTTCATTTAAATGTTCCAGGGATAAAATTGTCACCTTT-TCCTAGGGAAAAATCTTTGTAAAAAAATACTCTGTTACAGTCCTAGTTGA-----------TTTTTATTTGATTAGAACTGCCTTATTGATTATTTTACTGTTGGAAGCATTTATAAAT------GTTCTTAG-AAATACATTTTAAAATCACAGCTTGTGCTTCTCTCCCTCAGTTACCCAGGCTG--TATGACATCAGGAACAC---------TACATTGATAAATTGCTGATGGCATGATGATTATGGAAATGGTCATTGACTTATCATCAGTCACAATTTATTTCGAATCAGCGTTCACTGTTTGCAGCAGAAAAAGAAGTTTTATC-------------------------------------------------------TAAAGCCTTGTTGAGCATCATCTGCAATGCATGAATGAAAACACTGATAGACCATGTGGCCTCAGGCAGCCCAGAGTAGTCGGAAGATCACTGGGTTACCACATACTCATAGGAAAACT-ATTGGCAAAACACGTTAATTTAAGAACCAGCAAATGTGCCAAA-TGCAAAATGTCTCTCTAGACACAGAGAACCTCTTTTTCTTCCTACT--CAATTGGCAATAAATGATAGTGTATGAATCTAATTTGCTATTAAATTGCAAGTAAATTGTTGCTGAATCATGACATAATGGTCTTTTATATCTCTAAAACAATTTTTGTAGCAGGAAATACAATTTGTACATTTTTTTGCAGAGACACTGTAGTGTTTCATTATTTCTTTCCAACACATTTAATAATTGTAGTAATTTTAGGTAAGTGAAGCCCAAGTAAATGACTCCCAGTGGTATTATTGCTTACTATTTTTCTAATTTCT-AGTTCTTCACCATTTGCAAAGGATTA ....:x.x..:.....x.x...x.x.....:.........:.:.......x.:.:.xx.:-----.....:......:.......:...x......x....-....:.::.:x...x...x.....:.x:.:.x:...:..:x:::....:-.x...x:...:.--:.....x:...:.-.:::.:.....:x.....:x.:-----------x.......::x..:x.:.:::.::.:......-----.x........:..xxxxx..:------.......:-..:x:.x...x...........x...x....xx.....:...---x....x..--.:..........:....---------...x..........:..........:..............x.....:x...x......................:.....::..::..x:....:...xx::.x:...........-------------------------------------------------------..x........::x:.x........x:.x........:..x....x.xx..::x::........:...::..::.x.....:.....x.......:.......:.........x..:..-:..x:x....xxx..............................-.:.::x..x.:..:............xx:.:.x....:....:x:.--...:............:..:...x...x.:..x.x::..:...........:...........:........x......:.x.x.....:...:....:....:.:....x.......:.:...:..:.::::...x.-.x.....x:x........:.....:.::................:.x..xx.............x...:::.......-..:.x.x....x........x..::x..x..........x...:.-.:..xx...:.....:::......:. 60M5D36M1D49M1D12M2I13M1I22M11D32M5I21M6D8M1D42M3I8M2D17M9D116M55D119M1D43M1D46M2D138M1I78M1I45M1D26M 694/931 74.5% 944/94230402 0.0% 109/931 11.7% 129603887 60610668 +5020 chr4 + 190214555 181855794 181855793 181855969 176 AGAAAATGAGAATAAAGGAAGGAGAGAAAGGGAGAGGATGGAAGGAAAGAAGAGAGGGAGGGAGGGAGGATAGGAGGAAGCAAGGAGAGAAGGAGGTAGGAAGGAAGAAGGGAGGAAGAAAGGAAGGAAAAGAGGGAGGGAAGGAAGAAGAAAGAAGGAAGGAACAAAAGGAGGAA chr4 - 94230402 33960400 33960399 33960570 60269833 60269832 60270003 171 aaaaaaagaaaaaaaaaaaaaaaagaaTGGGGAGAAGATGGGAAGAAAAAACCCAAAAAGGTAGAGAGCATTGAAGAAAGAAAGGAGAGGATTAAATGGGGAATAAAATATATGACAGAAAACCAAGAAAAGTGGTAAAGAAG--ATCAGACATGAGGAAG---CAGAAGGCGGGA .:....x..:..x...::..::.:::.x:......:.....:.:....:..xxx.:::...x..:...x..x.:..:...x........:.xx.::.:..:.:x..:.x:x:x.:x.....:xx.:......x..x.::....--.xx...x.x:......---..:....x..:. 143M2D16M3D12M 108/171 63.2% 171/94230402 0.0% 5/171 2.9% 147895394 42319161 +3051 chr4 + 190214555 181855915 181855914 181855968 54 GGAAGGAAAAGAGGGAGGGAAGGAAGAAGAAAGAAGGAAGGAACAAAAGGAGGA chr4 - 94230402 19799669 19799668 19799722 74430681 74430680 74430734 54 GAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA .:...........:x........::..:.::.::.::......x....::.... 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 162056246 28158309 +3602 chr4 + 190214555 181855926 181855925 181856117 192 AGGGAGGGAAGGAAGAAGAAAGAAGGAAGGAACAAAAGGA--------GGAAGGAAAAGAGGGAGGAAAGAAGGAGGGAAGGAAGGAAGGAAGGAAAGGGAAAGAAGGAAGGAAAGGAAGAAGGAAGGAAGGAAAGGGAAAGAAGGA--AGGAAAGGAAGAAGGAAGGA-AGGAAGGAAAGGGAAAGAAGGAAGGAAA-GGAAG chr4 - 94230402 72111981 72111980 72112183 22118220 22118219 22118422 203 AGAGAAGAAGGGAGAATAAAAAAGAGAAGGTACAAAACAACAACATATGGCAAGATAAGAAGAAGAGTGACCAAATAAAAAGTGGGAAATGGAGAGAGAAAAGGTTTGAAAGAAAAGAAG-AGGTACTAAGGACATGAGAAGAAATATCACAAAAAAATGATAGCAGCATGGGAAAGAATGTGAGTCCAGGAAGGGAATGGAAG ..:..:.:.:...::.x:...:.::.....x......x:.--------..x.:..x....:.:..::x::xx::.x::..:.x:....:x:::..:..::..:.xxx...:....:....-...x.xx.....x.x.::.....:x.--.x:...::.x..x:.x..x.-:....:...x.x..:xxx.......:..-..... 40M8I72M1D26M2I20M1I28M1I5M 116/191 60.7% 203/94230402 0.0% 13/191 6.8% 109743945 80470610 +3003 chr4 + 190214555 181857537 181857536 181857600 64 AAACCCTGTCTCTACAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAAA chr4 - 94230402 24339883 24339882 24339946 69890457 69890456 69890520 64 AAACCCAGTTCTTTCTAGAAAAGTGATAAAAGAAATTAATAAAACAAAACAAACAAACAAAAAA ......x..:::.x.x.:....:x:.x....:...xx..:.............x...x...... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 157517654 32696901 +3035 chr4 + 190214555 181857549 181857548 181857615 67 TACAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAAACAAACACATTAGCCA chr4 - 94230402 35014852 35014851 35014918 59215485 59215484 59215551 67 TACAAAAAAAAAAAAAAGCACAAAAAAGCCCCCAAAACAAACAAAAAACCAACAACTACCAGAGCCA .................:x.x......xxxxx.........x......xx.....x:..xxx..... 67M 51/67 76.1% 67/94230402 0.0% 0/67 0.0% 146842697 43371858 +3321 chr4 + 190214555 181857552 181857551 181857608 57 AAAAAAAAAAAAAAAAAAAAAAAA---CAAAACAAAACAAAAAAAAAAAAAACAAACACA chr4 - 94230402 82008665 82008664 82008724 12221679 12221678 12221738 60 AAAAAAAAAAAAAGAGGGGAAAAAGTCCAAAACACAACAAAAACAAACAAAACAAACCCA .............:.::::.....---.......x........x...x.........x.. 24M3I33M 48/57 84.2% 60/94230402 0.0% 3/57 5.3% 99848887 90365668 +3026 chr4 + 190214555 181857553 181857552 181857599 47 AAAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAA chr4 - 94230402 81399198 81399197 81399244 12831159 12831158 12831205 47 AAAAGAAAAAAAAAAACAACAAACAAAACGAAACAACAACAAATAAA ....:...........x..x.........:......x..x...x... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 100458355 89756200 +3070 chr4 + 190214555 181857553 181857552 181857599 47 AAAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAA chr4 - 94230402 79171643 79171642 79171689 15058714 15058713 15058760 47 AGGAAAAAAAAAAAAGAACAAAACACAACAAAACATGAAAAGAAAAA .::............:..x......x.........x:....:..... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 102685910 87528645 +28167 chr4 + 190214555 181860156 181860155 181861685 1530 TAAGCAAAAGGTGACTTTACAGAGTAGGAATTCTCCCGGTTAATGTCGCCTTAAGCGCCTGTTAACTACAATGCATTGTTTAAAAGCTGACATCTGTGATTATTTCAGGCACAGGGCCATTGCTTAATTTACTTTGGTTTGATTTTTTTTT-----TCTCTCCGCCCTCCCAGTTGGCTTCTCCAGAAGAGTAAAGCCAGACAGTAGTTACTGCTTTGGAAAGAAATGATAAGCCGAGCACTTTGGAATGCATTTTTCTAACGCTCCTTCGCCAAGTGTTACATGACTGTATCAAATTTCTTTAGACTTTGATAATGAGAAACAGACAATGCCATAGACAATACAACCAAGAGATTTGTGGTAATAGAGGATTTCAGAAATACACATGGTTCTAAATGGCT-CTGAGATTATGTGCTTAA---------AGTTCTCCATCTTTTATTTTTTTCATGTTTGAGTAGACC-CTACGGTTGATTATCAGGTTGACGAAGGGCAGAGGCCCTGTCTGCTGATTATAAATG-TGCAA---TGTGTGTAAAATTTTCACACATAATATAATATTTCAAAGTTATTTTTATGGGGG--------CTCCGGGGTCCCAGAACTTAAACAAAGCTGCTAATCATTGGCTCCAAGAAATACTTAGAAGGAATCATAGTTTTTTTAACATCATATGGAGTCATTTGCAGACTTTTGGGCTGCAGATCACAT---------TATGTTTATTTATTCAGCTGGCTTTGGAGATTTGAGCAATATTTGGAGGCACACAAGTCTTTGCCTTGCTTAATAAAAAGTATACTCAAAGGTATCGCTCCAGCATTTTTATACACAAAAGATTCTCACAAACAGGG--GTTGATATC------------GAAAAAAATGTAA----TTTTGAAATTAAAAAGAAAGAAACT-AAACAATCCTGGGGAAAAACATCATCCAGCGGTAT------------------CTTTCTTAAGAAATCTTCAGCAGGCCTTGTGTCCCTTGTGCTATAAA-GCTTGAAAATACGTTATTATCTTTTACAAGAACACTGTAAACTGTAACTTGCATTATTCT-TTGTGATCATCTACAACACACAAGACCTGGCTCACCTTTTAAGAATAGTCATTTAACA------CAGGATGTGTAATTTTGTT-GGCATTATTAGTAGAGCTTTATGTCACGAAGTCAATTCAGTCTTTTCCATGAAAGAAGGTGGAATAAATATTTCATAGCTATGGCTTTTGAGGAACATTCCGCCTTTCGATCTTGAGGCAGTCTTTCAACATGTATGCCAATCAGAAGTCTTTAACAGATGTAAAATACATCTTGTTTACTTGTCTTTGAAAAATATAAGGATCTCAAGATGCACCTGAAATATTCATTATGTGGACAATACTTCAAGCAGGGCTAGAACTTGCTGAGTGTTTCAACCACTGCCTATTTGTTCAAGTTTTTTCTCTTTTTCTGGTTTTCCTTTTTCTTTCTTTTTTCTTTCTATCTTCCAACATCCCTAATACTTCTAAGTCCATGACTTGTCAAAA-----TGGCTATA--ATATACCCAGATAAGTAAATTTATTGATAGCATTTAACAT chr4 - 94230402 52256845 52256844 52258318 41972085 41972084 41973558 1474 TAAGCAAA--GTGACTTTGCAAAACAG-AATTCTTCACGTGACTGTTAAGGTACA-GTCTGCTTGCTTCAACTCCCAGTTTAAATG-TAATGTTTGAGATTGATTTGGGCACGATGCCACTGCTTAATTTACTTTGGCTTGATTTTTTTTTCACCTTTCTTCTGGCTTCACCCTTTGTTTAGCAAAAGAAAGTATTTAACACAGTAGCTTGCCCTTCAGAAGGGAAAGATAAACTGAATTGTCAGAGAAGCGTTTT-----CAGTCC------ACATGTTGCACAACTATACGGCATTTCTTCAGAGGCTTATAATGAGAAACAGGCAATTCAATGGCAAATACAACTGAGGGATTTGCAGTAGTGGGAGGTTTCTGAAATGCATATGATTGTAAATGGGTATTGAGATAATGCATTTTACTGGGTGGTAACTCTAT-TCATTTAGCTGGGTAGCGTTTTGTAAGGCTTCTAAGTTT--TTATAAGGTTT----------TAAGTATTTTATGAGGTTTGCAGGTACTGCAAACTTCCATGTAAAATT------CATAATA----------AAATTATTTCTGTGAGGCAGTGATGCCTTCTAGGTCT----GTTTATCAGAACATTTTAGTTA--GGCTT----------TTACAAAGGAGCCTTTTTGTTTTCACATAAT----------TTTCAGGTTGTCATGCTAGGGATTATGTATGTATGAGTGTCTTTGTTT-TTCAGCTGACTTCAGAGGTTTAAATACCGTTTGAGGATTCATCTACCTGTGGCTTACTCTATAAAATATATGGCCTTAGATAG---------------AAACAAAATATATTTT---GAACAGTGTCATTAGTATTCGCTTACCCTTAGTGGAATACTTAAAGGTTTTAAAAATTAATAAATAGCACATTCAGAAGATCCTGAGATAAAGTACCTGCTAAATATATTACAAATATCATTGTTTCCTGCCTTGA-------TCGTCAGATTTGAATTTCCCAGTGCAATAAGCAGTTGATAATG---TAACATTTTTTCTGGGTAGGTTGTAAACAAAGTCTTGC-TAATACTATTGTGATCATATGTGTCAAATAGAACCTTTTCCACCCTCCAAGAATAATAGTTTAATAGTCTTTAGAGCCATATAATTTTGTCCAGAGCTATTAGTGGCACTTTATGTCATATAGTCATCAAATGTATTTCTATGAAAGAGAAAAGAATAAATATTTCATGGTTACAGCTTTTGAAGAACACTCTGTCTTTCAATCTTGGGCCAGACTTTCAACATATGTGCCAATCAGAAGTCTTTAGCAGATGCAAAATGCATCTTGTCTCCTTGTCAGTGAAGAATGTAAAGATCGCAGGATTTATCTGAAATATTCATCACATAGACAAAAATCTGAGCAGCATGAGGAATCACTGAGCCCAGTAATCACTACTTACCCATTTA---------------------------------TTCTTGCCTCCTCATAACT------GGCCCTAAAAAGGTGAGGAGTGTGACTAGTCACAAGATTTTGGTTATGCCATATATCTTGACAGTCAA------TGACAGTATTTAACAT ........--........:..:.::..-......:.xx..x.x...::xxx..x:-.:...:.x:..x...:x.x:x.......x.-.:.::.:..x....:x..::.....::x....:.................:.............-----.:::..:.x.:..x.xx..x.:..xx.x.:.::.:xx.xx:x.x.......:.xx:x...::...:.:..x.....:.:..::xx.:x.::.x..:....-----.:x...------.x:....:..::...:..:x:x.......:...xx:.x..............:....x.x..:.xx........::..:......::...:.:.::.:....x.....:..:...:..x.......x.-:......x...:::..x.---------.::...x:-..x....x:.xxx.x::....x:xx..:.:-...x.x..--....x.....x----------x.:.:x:.x.x..xx.x..::.::.:-.....---.x::.........------.......----------..:......:.:..:..x--------..:.x:....:----::...xxx:..xx.x:..:.:.--....:----------...x..:.:.x.x.xx..x....x....x..----------..x...::.x.::x...:x:...:.::.---------.:.x...:...-........:...::...:...:.::.x::....::.::x..:xx::..x..x...:..:x......x:...:x:.xx..:..x---------------.x...x..x.x...:.---:.....x.--:..::...:------------.x::..x.:x...----...x:.......x..:x.:x.x.:.-.:.x:......:.:x...::.:.xx.:.:xx:...------------------..x:...:.-------..:x...:::.x:xx.:..:x....x....:-:x....x...:---..x:..:....x:::.x.x::.......x:x:x.....-.x..x..-..........x.:::x..x.:.::....xx::....:.::.......:.x:.....:.------x::.x::.:.........:-:.x::.......:.x:..........::x.....x:xx.xx:x....:........:::x:...............:.:..::........:.....:..:.:.....:......:.x...x..........:.:...................:......:.....:........:.x......xx....:...:...:....x..:...x:.:.............:.::.:.....x.x.:::.....x::x..:.x.::.....:x:xx:..:....:.:..::::..:.---------------------------------.....x::..:.:x..x..------:x......x.xxx:x.:.xx::.....x....x..-----...:...:--.....:.:x..:.:x:..------...:..:......... 8M2D17M1D27M1D30M1D64M5I100M5D6M6D128M1I18M9I8M1D30M1I8M2D11M10D26M1I5M3I13M6D7M10D18M8I11M4D22M2D5M10D31M10D28M9I11M1D83M15D16M3D8M2I9M12I13M4I25M1I35M18I9M7D31M1I11M3D38M1D7M1I58M6I19M1I294M33D19M6D35M5I8M2I18M6D16M 902/1384 65.2% 1474/94230402 0.0% 236/1384 17.1% 129603311 60611244 +3068 chr4 + 190214555 181873740 181873739 181873821 82 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTTTTGTTTTTTGTGTTTATTTGTTTGTTTGTTTTGTTTTGAGATGGAG chr4 - 94230402 67783525 67783524 67783587 26446816 26446815 26446878 63 TGGGGGGTGTGTGTGTGTGTGTGTTTGTTGGGTTTTTTGGTTTTT-------------------TTTTGTGGTGAGGTGAAG ...x.x..................x...xx.........x.....-------------------......xx....:..:.. 45M19D18M 53/63 84.1% 63/94230402 0.0% 19/63 30.2% 114090215 76124340 +3304 chr4 + 190214555 181888105 181888104 181888176 72 CTGCAACCTCTGCCTCCCAGGTTTAAGCGATTCTCATGCTTCAGCCCCACAAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::....:...:.x...x..x.x:......::x.............:....x.... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 163690979 26523576 +3066 chr4 + 190214555 181888523 181888522 181888586 64 TATACATATATGTGTATATATATATATGTATATATATACATATATGTATATATATACATATATA chr4 - 94230402 71926809 71926808 71926872 22303531 22303530 22303594 64 TATATATATTTGTGCGTACATACAAATGTCTGTATATAAATAAATCAATGTATAAACGTACATA ....:....x....::..:...:.x....x.:......x...x..xx..:....x..:..:... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 109961714 80252841 +3008 chr4 + 190214555 181888555 181888554 181888609 55 TATATACATATATGTATATATATACATATATATATGCGTGTGTGTGTGTGTGTGT chr4 - 94230402 37363040 37363039 37363094 56867309 56867308 56867363 55 TGTGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTAT .:.:......:x........:..:..:.x......xx....:.:.....:...:. 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 144525515 45689040 +16499 chr4 + 190214555 181894366 181894365 181894779 414 CCTACCTGTACTGCTCGGACTTCACACACAGATATTCTCATTTACAGGCCTGGCGTGACTGGCTTCACCAAAATAGTTCTCTATTATTTGTTGGCAGCTGATAAACCCATCAAAAG--GTAACCAATAAGTAAGAACTTATTTGAAGAGTGACATTATCTTACTACTGTCAGGGAGTATGAGCAAAACAGCCATCGGTTTATCGTATTTATAAAGAGAAGAAGTGATTGGAAGTCGA--ACTTTTTCTTTTTTTAAGGTCAGAATCCTTAATCCAAAGCTGCAGAA---GATTTGATGTCTTGTAAATGGTCAGTTTTATCTGAGATCTGGTGTTAGGGGCTTTGCCAAGTCAACGGTCTCCAAGTCAGTGGCAGAAAAAAAAAAAAACGGGGAAATTAGAACTTTCTCCAGCTTACGATA chr4 - 94230402 52268883 52268882 52269296 41961107 41961106 41961520 414 CCTGGTTGTGTTGCTTAGACTCCCCGCAATCATGCTCTCGTTTACAGGCCTGACATGACTGATTTCACCAGAAAAGTTATCCATTATCGGATGGCAGGAGATAAACCCATCAAAAGGTGTAACAAACAAATAAGAACTTATTTGAAGAGTGGCATTATCCTATTTCTATCAGGAAGTGTGAGC-AAATAGCCAAGAGTTTATCGTATTTATGAAGAGGAAGGCTATTTGGAAGAAGATTTTTTTTTCTTCTTTTACTGTT-TTTTCTTTAATCTGGAGCTGCAGCAGTGGAAATGCTATTTTCTAAATGGTAAGCTTTATCAGGAATACGGTA--AAGCATTTTACCAAGTTATC-CTCTTCGTATCAGTGACGTGAAGCTAAAAGA--GTGGAAATTCTTTTCCCCTCTAGTTTCCGATA ...:x:...::....::....:.x.:..xxx..::....:............:.:......::.......:..x....x..:.....:x.x......xx.................--.....x..:..:.....................:.......:..:.x..:.....:...:.....-...:.....xx:...............:.....:.:::x.:x.......xx..--x:........:.....xx..:-xxx..:......:::........x.---..xx..x.:.:..x........x..:......x.::..x:...:--.:.x::...:......:.x.-x...:.:x:......:.:x:..:xx....:.--.x.......xxxx::::...:..:..x..... 116M2I65M1D53M2I21M1D25M3I44M2D20M1D31M2D32M 294/407 72.2% 414/94230402 0.0% 14/407 3.4% 129625483 60589072 +6344 chr4 + 190214555 181908443 181908442 181908659 217 ATAATTTAATTTTAAAATATTTAAAGATAATATTTACATTCCATATTGGGTGATACATTTTA-----AAGACAGCAATTTTCTGATGAATGTTTTTAATTTTAAGCAC--TCTAATATAAGGAATAATAAAAATGACATTTTAGACTATTCTGAATTTAG---------AAGCATAAAT------------AGAGAAATTCGGGGCCTAGTTTTCAAGAATAGATGCTAAGAGAATAAACAAAAT chr4 - 94230402 52273987 52273986 52274226 41956177 41956176 41956416 240 ACAGTTTACCAATTAAATAATT-----TAATACTGAAATTTTAGACTGGGCAATATTTTCTTTGGTTAAGACAGCGGTTTTCTGATTAATGTTTTTAATTTTAAGCAATGTCTAATACACAGAATAATAAAAGTGACAGTTCAGCTTATAGTGAGTTAAGGATGTTTCTGAGAATACACAAGAGGTTTTTAAGAGACTTCCAAAGTTTATGTTTACAGAACAGAAGCTCACAAATTAACCCAAAT .:.:....x:xx.x.....x..-----.....:.x.x...::.x.:....::...:x..:.x-----........::.........x....................x--.......:.x:...........:.....x..:..x:...xx...:..x..---------:..x...x.:------------.....xx.:.:::.::..xx...xx....:...x...x.x.:.x...x.x.... 22M5D35M5I41M2I50M9I10M12I54M 151/212 71.2% 240/94230402 0.0% 33/212 15.6% 129634456 60580099 +3292 chr4 + 190214555 181910592 181910591 181910661 70 ATATATATATATATATATAAATACACGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATTTTA chr4 - 94230402 19704274 19704273 19704343 74526060 74526059 74526129 70 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGTTTTTCA ..x..x...:.......::x...:.:x.....:...x:...............x:.x.xx....x...:. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 162206318 28008237 +7597 chr4 + 190214555 181925308 181925307 181925574 267 ATAGGTTATTGTAAATGCAAAGCACAAATTCTCATTCATAACTACTTAATTAAAGAACATTATTGGTTTACCTGTAATTGCTTTAATTTATCACAGTGTTACAATTTATAAGTAATGTGTGTTATTCTTCAGTAGTTTTATTGTAATTACACATAATTTACAATTCACATTACCGGATTTCTAATTAGCCCCTAAATATTCTTGGTTATAAAAATGAAAATACTATTTTAAGGAGAAC---AGGATAAT-------TAACAATGTATTAAATCTATT chr4 - 94230402 52278155 52278154 52278426 41951977 41951976 41952248 272 ATTGATTACGGGGAATACAGAACACA--TTCTCATTTATA-TTGTTTGATGGAGAATCGTTACTACTTTGCCTATAATTGCCATAATTTATCACTTTGTTAAAATTTGCCAGAAA--TATACTATTTGCCTATAGTTCCATTCTAACAGCACGTAATTAATTATGTTCTTTGCTCAGTTGCTAATTGCCTTTAACATACATTTAACTATAAAAACAATAATATTAATTCAAAGATTATTCAAAGATAATAGGTAAATAACAATTTGTTAAACTTTTT ..x.:...:x.x:...:..:.:....--........:...-:.::..:..x:.::.x.:...:.:x...:...:.......:x...........xx.....x.....::x..x..--.:.::....:x:.x:.....::...x...:x:...:.....x.:x..x:x.x..:.:x::..x......:x.:::x.x...:x:..:::........::.x....:..x..:..:..xx.:---.:......-------.......x.:.....::.x.. 26M2D12M1D74M2D121M3I8M7I21M 171/262 65.3% 272/94230402 0.0% 15/262 5.7% 129647153 60567402 +31583 chr4 + 190214555 181934103 181934102 181934648 546 ATACATAGGAATATGATGTTGGACAATGCGCTAATTGAAGTGAAGAGTTTAATGGACCTGATAGAGGGTAAGGACATGCCATACCTCA--GTTGATTGCTTCTCGATTAGGACTCACATTGCTATCCCATTCTTCCTTTTGAGTATGACTTGAGTCTGTACAGTGCACTACATAAATGATTTTCCATGGCTTTTTAAAAGGCGGTGCATATTAATATTTTAAACTGAAGTAATTGCTTCTTGCTCAGCAATGGGTTTCATTTATGAGTGTTTATCCTCAGCAAATGGAAAGTATGGTTAATCTAAGTTAAAAATGGGTTCTTTAAATAGCTCTAATTACATTCTGTTTATATTTGTATGTATTAGACACTTAAGATTTAATCGGTAGCAGTTCTAACAAGCCATAATGTTTATTAGCTGGTTTTAAATTATTGTTATGGATGGGACTGGAATGAGAAAATAA---GTGATTTGCCTACTATCAAACACAGTAAATAAAAGATGGACCAATGCTTAAAAAAGGA--TTTTTAGCATAACTTCAAATTTTAATAT chr4 - 94230402 52279268 52279267 52279812 41950591 41950590 41951135 545 ataaataaataaatGA----GAGCAATGC--TAATTGGAGAAAATAGTTTAATGGGCTTATAAATGGATGAGAACAAACTGTTCCTCAAAGATGATTGCAGCTCGCTTAGGATTCAGAATGCCATCCCATT-TTCATTCTCAGTATGAATTGAGATTCTATTGTAGAGTACATAAATGATTTTCTTCGGCTTTTTAAAAGGCAGCATGTATTAATATTTTAAACTGAAGTAATTGCTTCTTGTTCAGCAATGGGTTTCATTTATGAGTGTTTATCCTTGGCAAATGGAAAGTATGGTTAATCTAAGTTAAAAATGAGTTCTTTAAATAGCTCTAATTACATTCTGTTTATATTTGTACATTTTAGACACTTAAGATTTAATCGGTAGCAGTTCTAAGAAACCATAATGTTTATTAGCTGGTTTTAAATTATTGTTATGGACGTGGTT-CAATGAGGAAATAAATGGTGATTTGTCTTCTATAATGCGTAGTAAATAAAAGATGGGCCAACACCGAACAGAGAAATTATATATTATATCATTTGACTTTTATAT ...x...::x.x....----.::......--......:..x:..x..........:.:.:xx.:x..:.:..:...x:.::.x.....--.x.......xx....x......:...x.x...:........-...x..:.x.......x.....x:.x..:x..:x.x................:x:...............:.::::..................................:..................................::....................................:.........................................::.x...................................x..:........................................:.x.::.-x......:......---........:..x....x.x:.::................:....::.:x..x.:..:.--.x.x..x:...x.x.:x:.:...x.... 16M4D9M2D57M2I41M1D315M1D14M3I58M2I28M 443/538 82.3% 545/94230402 0.0% 15/538 2.8% 129654835 60559720 +9917 chr4 + 190214555 181960389 181960388 181961222 834 CTACCTCAATGAAAAATATTTCAGTA---CACATATAATACCAGCCAGCTATTTCTTGAGGGCAACTTTAAATCGAAGTCAAGTCACAAATGGATTGAGACTGGTGATCTCA-CTTCATCCTTTGGAAAACTATGTATATCACAAAATCAGTATACATTTTGACATAGTTGGCAGCCTTTCCTTGAAGTAGGCTCTGAATCAACTGAGCATGGAAACTCAATTTGCCTG-----GGGATATGCTAGCCTTTAAATAAAGAGGGCTGATAGTTTCTGCTAAAACAATGGAGAAA-TCTCCCAACATCTATAATTTTGTATACACTATAACTCTAACAGACAGTCTAGGTTTCAAGTCATCAACTGCCCGTAAAATCATTATATA--TACTTTTTAGAACAGAAGTATGGTAAATGTACTTTTAAGCTTACTTGA------CCACATATTTTTTTAGAGTACCAATTTCATTACATATTTTCTTTTATTTCTCCCACAAGATTATTTTTGCG--TCATCTCCCCAGCAACTCTGGTCATATAGAATACCACCGGCTGATCACACAGCTCTGTGACAGCCATTGCAGATTGCTAATGGTAACCCTGCACTAGGGAATAGATGGCTTTGGATGTCTGATCTAGCC-CAGGGGTGCAAAGGGCCTGCTCAGA-GAGGGCATGATGAAGCTCCTGAGGAACAGGGAGACCCAAAT---TAGGAATAAGAAA--------ATGTGGAAGCAATTATCCATGGGCACCCACTACCTTAAAATAATTGGAACCACTGTGCACATTGCTTAA-AGCTACCTGATGCTTGCTGTCAACTTGTGTCTCCACTTCTGTGCTGGAACTGAGCAAAATAAAGG chr4 - 94230402 52294886 52294885 52295663 41934740 41934739 41935517 778 CTAACTTAATGAATTATCTAACAGCAGAAAACATTTTACGACTACCAGTTGTTTCCTGTGTGTGCACTTAAA-----GTCAAGATGCAAATTAAATGATTCTGGTGATCTCAACTTAGTGTTTTAGAACAGGAAGCACATTGCTGCATGTG-ACACATCTTAACATGGTGGGCAGCCTCTTCTCCAAACAGTTTCAGAACCAACTAAGTATGGAAACTTATTCCACGAAATAATGAGAAATAGTTGCATTTAAATAAAGAAGGATGATGTTTTCT----AAGGAGTGGAGAAAGTCTTGCAATGTCTGTATTATCTTA-ACCTTA-----CCAGCAGAAAGC---AGTTTCCAGACA-------CCCAGGATTTCTCTATGTGATTATTGTTCAGGAAAAAGCTGGCATCAATATCTGTTATATATTATTTTATATCTGCTATATATATTTTCAGA-----------AATATATATCTGCTTTTCTTTGGT------GTTTGATTGTCCAGTTTCTTTCACTAGCAAGAGGAGTTGTGTAGAAAACCATT-TCTTGTTAC------TTATAACAACTTCC-----CTGCGAATGTCATTCC----------AATAGA-----------GT---ATCTAGCCATAAGGGTACAGAGGTCTCACCAGGAGGAAGACATGACAGAGCACC-----------AAGTTCTAGCTATGTAAATATAACCAATTATCTGTGTATATAACCAATTATCTGTAGCTACTCACTATTTCAACATAATTGGATCAACGGTGTGTTTTCTTTAAGAATGGAGTAACTCCTACTGGTAGTTTGTGGCTGCACATTGGTTCCTGTTCTAAGCAAGACACAAG ...x..:......xx..x.xx...:.---x....x.x.::x.x:....:.:....:..x.x.::xx:.....-----......x::.....x:.x...xx............-...x:.x:...:...x.xx.x.:.:..::.x:x..xx.-.:....:..:....:..x........:.:..:x..::..x:..x...:.....:..:.........:.x.:::.xx:-----.:..x..:x.x..x............:..x....:x.....----..:x.:........-...:x...::...:..x.x.:x..-..x:..-----.:.:....x..:---:.....x..x..-------...:x:.xx..x:...:.:--..:.x..:..:.x.:.:x.:xx:.x...:.x:x..xx.xx...:..x.------.:.:....x....:...-----------.x..:....:.x.....x...xx:------.x..:x..x.x.:--.:x.:..x.:.....xxxx:..::.:.....x....::-x..x:.:..------:.:.:...:.:x::-----:...x....x:.x:..----------......-----------..---........-:.:....:..:...x.:::.:x:..-..:.:.....:::...x..-----------:..x:.:.:x.---..::x....xx..--------:.:.:x..x........::.:.x:..:.....::.:..x.........x.x..x...:::x..x:....-.::x:xx.:.:x.:.:...x:.::.....x..x...x.:x..x.:x.xx..:.....:.:.x.:. 26M3I43M5D35M1I38M1D77M5I41M4D14M1I24M1D6M5D12M3D12M7D19M2I48M6I17M11D24M6D13M2I38M1D9M6D14M5D16M10D6M11D2M3D8M1I25M1I19M11D11M3I13M8I69M1I65M 470/744 63.2% 778/94230402 0.0% 124/744 16.7% 129665503 60549052 +7856 chr4 + 190214555 181964421 181964420 181964827 407 CTTTTTCATACACGTTCTGTTTGAAGAAAAGCCTTGCTGTGTTCCTTCTTTTGTCATTCC-TGTGTCTGTGTAGTACAGTAGCATTGCTTTCTCCCAACCCTGCCATCCCTCCTCAATTCTGTTCTTCCTCTCTTCATCCCCCCAACACTCTAAGTTCCTTAATGTTGCTAGAAAAAAAAAAAATAGCCATTCTGATCTCAAATTGGGAATAGGCTGATCGGGCTATTTTCTTCTTCTCGT--CTATATGACATTATTGGTATACTGCATGCACTGCTGAATATCATCAACATGGGACAAGTACCAGCAGGGA-----------TTCGGTTATAAAACACGTATTTGCCACCGGTGAGAGAGTAAACGTAGATACAGGGACAAACATTTACAAAACAAACATGAAACTTAAAATGGAAAGG chr4 - 94230402 52298142 52298141 52298487 41931916 41931915 41932261 346 CTATTTGACACTGGTTCTGTTTGAGAAAATTGCTTTTAGGGCCTTCTCTTTTGTCACTAAGTGTGTTAATGAAGTACAATGTTATT-----------------------CTTTCCAAGTTTTTTTTTCCACCGCTGA------------------------AACTTGGGCAGAGA---------------TTCTGAGATAGAAT-GTGAAT-----------GCTGATGCATTTTGCCCGTAACTGTATGATTCTGTTAGAATGCTGTACGCACTGTTGAATATTGCCAACGCATGACAAGTATCAGAAGAGGCTTAGCTGGATTTCAGCTAGAAAGCACGCATTAGCCACAGGTCACAGAATAAACATAGATATAGGGA-AAACTTTCAGAAGGAAAACATGAAAATTAACATAGAAAAG ..x...x.:..xx...........::...xxx...x:x.x.:::::..........:.xx-.....:x:..x......:.:x:...-----------------------..:::...x.:.x..:....x.:x:.x.------------------------..:x.x.x:...:.---------------......xx.x:...-.x....-----------...:x.x:x..:.x.:...--..:.....:x:.:..:.x..:...:.:......:.......:::....:::x........:...x..:.:-----------...:.:..x...:....:...x.....x...x.x...:.....:......:.....-....x..:.x..::x..........x....x..:....:. 60M1I25M23D28M24D14M15D14M1D6M11D19M2I70M11I56M1D40M 227/332 68.4% 346/94230402 0.0% 89/332 26.8% 129666279 60548276 +39403 chr4 + 190214555 181992107 181992106 181993610 1504 TGGCATATTTTACCTGACATTTGTGCTTCTTC---------ACTTTATTAAGCATGCCTTTTTGAACGGAAATAACAGGCTAGAATTTACCAAAAGTCTCGGTACCTGAGAGC--------AAAGATTTCTCTTGCACTCAAT---TTATCTCCTGTATGGTGTCTTTACCCTTTCAAACA-GC--ATGTTTTTAGTAAATGAACACGAAAACAAATTGAAAAAGCAATAATGGATGCGTTCTCTCATTAGTGCAACCAGGCAGATTACTAATTCACAAATATTGAAACTAGCACTGATGGAGATGAATGAATTTCTCATAATTTAATAATGCAAATCACACTAACAGCAGAGACCTCCGATAACTAGTGGCACTAGAAGAATTACTATGAATGCCAACTGATAGATGCAATGTTGATAGAGCTATTTATCTTGTTGTTTCAT-------------TGGAAGTCTCCTCTTTTATGATATT-TATTATTT-----ATTCTGTATCTCTTTACATTTT---------------------------ACATGTTATAA---ATGACTTTCTCC-----TGAAAAAGACAGGAATTATGGCAACAAATTTTG-CAAGTTAATAATTTTATTTTTTCTCAGGTATATTTTGATCCGTGACAAATGG------------------------------------GGAGGCAATGGCTGTTTCAAAT---------GTGCGGTAA---TCACGACTAGAAGCATTTTTCAAA---------AGTTATCATACAA---AAAAATTGAC-------AACATCACTTTATCACACAAAAATAATGGGAGAAATGCAAACCTGTTTTTTAAAAACAAAAATATCCAATGAAATGCCTTTATACCCAGAACTTCTTGACAGATAAAATGTACTATTTAAAATATAGTTTAAGTGGCTCTACAATTCCATACTTCTACCATGAAGCTTCATTAAAGTCTATAAATTAGTACTACTGTCAGAGATGGCATTAAGTATTCAATAAGAGTAGACTTAATGCAATTAATAGCAATTAAAATTATACTTTTATGATGTTAGACACCAGCATTGTAAAGACATAATTGCCTGTAAGGACTTTTGTACCGTATTTATCCTCTAAAACTGTCCAATTTATATGAAAAATGCCAAAAACATATCCCATATGGGTACGATTATCTTCTCGGATTTTTAGAAGTAATCTGTC-TTATCCAGCATGCGCACAATAGGCTAATTTGCTTTAATTAGTTTTTTTCTCATTTTGTTAATAGGCATGTTGATGTTAAGTTTTTATTTCAGAGG-----------------------TACAGATGCT--AACTTCACTCATTATGTTCCTATTAAAGGG--------TCAGTATACTTTGTGATAAGCTGGACTTACCCACTTAAAAAGCATCATTCTTTGAAATATTAGATGATATAGCTTATCAAAC-ATAAAAACTATATTGCTGTTATAGTAATCGTGAGCAACT----TCTATCTACTTATTTGGTAGCT-------AAAGAACAGCTTCGCTGTGTCTGCTGTGGCGAGGCATTTTTGTATGGACATAATAAATTAGAGAAACTAATGAACTGGTTTCAGAAACACAGTCATTTGTGACTCCTCAAAGCATTCATAAGAATTACCAT-GAATCTATGCCAG chr4 - 94230402 52307206 52307205 52308829 41921574 41921573 41923197 1624 TGGTATATTTTGCCT----TTTTTTTTTCTTTTAGTAGCCTATTCTGTTAAGTATGC----TTGCACAGTCTTGACA-------ATAGTCCAGAATTCTCAGAGGCTGGGAGATCTTTCTGGCACATTCCTTTTCCACACAATAACTTATATCT------GTGTATATATACGTACATAGATGCTAGTGTTTTAAGTAGGC-----TTAAAAGTAGTTGGAAAAGCAGTAATAGATGAATTATCCCATTAGTGCAACTGGAGTTATTACTAGTTCACAAATATTGAAACTAGCACTGATTGAGATAAATGAATGTCTCATAATTTAATAATGCAAATCACACAAACAGTGAAGACCTGCAAT---TATTGATAATAGGGTGACAA----GAATTTTAGCACAGAACTTAAAT-TCAATAACATTATTTTCCTCTGTATTTCATAAAATGGCATTGCTAAATATTTCTTCAGTTTTTATTTTGCATTACTTCAGTTACTTCATGTATTTTTAAATCTTTGTGCCAAGTTGTTCTATCAGTCAGCCCTATGTCATTAGCCATGAGTTGCTTTGCAGTTGAATGCCAAAGCAGTGTCAGCATTCTATTTTAACTATTCTGTGATTCCATTTGGCGCAGTATTTATGTGAATCAGTGTCATTTAGTCCTTCTTTGGGTTCTCTAATATCACTTTACTTATTGGAGATTGAGGTTGCTTCACACTGGAAGACAGTACAGTAACTGTTTCTTTTGGGAATATTTAGTAAATTCTGGTACATCTAAAACACAAGTCAGAAACTGATTTCTGTAGACATC--TCCATAAGGCTGAAGTAATGGGGAAAAAAAAAACTTGA-----GAGGACAAAAGTC--------AGTGTTTTTATAACCTGTATGTCTAAGCTGGTAAAGTAGATTGTTTTGAACATAGTGTAAATGACCCTCTATGTCCAAACTTCTACTGTGTGGCTTCATTAAAGTACATAAATTACTAAAACTGTCAGAGATGGCATTAAGTACTCAATAAAAGTAGACTTAATGCAATTAATAGCAATTAAAATTACACTTTTATGATGTCAGCCACCAGTACTGTGAAGACATAATTGTCTGTAAGGACTTCTGTACCATATTTATCCTCTAAAACTGTCCAATTTATGTGAAAAATGCCAAAAACATATCCCAAATGGGTACCATTATCTTCTTGGATTTTTAAAAGTGATCTGTCTTTATCCAGCCTGTGCACATTAAGCTAATTTACTTTAATTAGTTTTTTCCTCATTATCTTAATAGGCAAGTTGATAAGGATTTCTTTTTATGGTGGTGGTGGTTTTTTCTTTTCTTGACTACAGATGTTAAAACTTTACTCCTTAAGTGTCTTTTGAAGAGATTACTGCCTTGAATCCTTTGC------TTGGCTCTTCCTTGTTCATATGCCCTCTTCCATCCAGTTGTCAATTACA-AGTGTAGCAAATGATAGTAACTCAAGTGTTTTT-TAGAGATGTAAAGCAGCTGTGCTTTGGTTAGTTAATTGGTAGTTAAATAGGAAAGAATGACATTTTTGTCTGTGCTGTAACAAGGAAGTTTACTGTGGTCATAATA-------------AATGAACTAATTCCTAGA--ACAGTCACTTATGTCTCTAATAGGCACATAATAGAATGTCCTTGGAAAAAATGCCAG ...:.......:...----...x.x:.....:---------.:.:.:.....:....----...x..:.xxx.:...-------..xxx...:..x....:.x:x...:...x--------:x.x...:..:..x...x....---....x..:------....x.x..:x.x.x..x.x.-..--:......x....:::-----:x....xx.:...:.......:....:....x:..x..:............::.:xxx.......:...........................x.....:.......x............................x.....:::......x.:..---..x..::.x...::x:.:x.----....x::.:.xx.x.:x.xx...-.::...:x::.....x:..:xx.:......-------------.::.x:.:..:..xx..x.x..x..-:....:..-----.:.:::.:.x.:....x..:..---------------------------x:....:..x.---....x..x..::-----....x:xx.x..x.:.xx::...x:xx.....:-.x.x.:x:.:...::....xx:x:x:x:.x...x.x:...x...x..xx.:.------------------------------------....::x:x..:..:....x.:---------..:.:....---.:x.xx:.:.:.::....xx:...---------.x:..xx.:....---.:...:...:-------:.....--.::..x.x:.x:..:.......::...x:x....:..x-----:.::......:.x--------.:..::......x..x.x.:x...x::.x.:....:.:x.:.:...x:..:.....x...:..:.:..x:.xx....x........::..x:.............x:........x..xx.......................:.......:...................................:.............:..x......:.:...:............:............:......:.............................:.........................x........x..........:.........:....:.......-.........x..:.....x..:........:................:......x.x..........x......:xx:.x..:..x..x::.x..-----------------------........:.--.....:....x...x..x:..x..:...:.--------::x.x..x.....:------:...x::.x..:xx..x.x.x..x::x...:x.xx.:.xx.x:..x.:.-..:x..x....:-...:x....xx.x..:.x..-...x:..xxx:....:..----.:.:x:..x...x.......:.-------......:::.x.:x:...x.x......::.:...x.x...xx.:...x.......-------------........::..:.x::.--.......:..:..x...:xxx.:...:x:.xx.....xx..x.-...xxx....... 15M4D13M9I16M4D16M7D29M8I22M3I8M6D21M1I2M2I15M5D156M3D20M4D23M1D30M13I25M1I8M5I22M27I11M3I12M5I33M1I52M36I22M9I9M3I24M9I13M3I10M7I6M2D38M5D13M8D349M1I95M23I10M2I30M8I14M6D49M1D12M1I20M1D18M4I22M7I55M13D18M2D43M1I13M 1013/1432 70.7% 1624/94230402 0.0% 264/1432 18.4% 129684901 60529654 +15098 chr4 + 190214555 182002996 182002995 182004058 1063 CTGACGTATTATGCTTGTTCAAGTGAGATATATTGATCATTTTTTTAATTGGATGGCCACTAGTGACTTGAATAATGGGTATTTCTGG--AAATACAAATAGTA----GATGCACAGCATGCAGGTAAGTTAAGTATCAGCTTTACCTAGGAATCAGCGGGTATTCTTGATGACTAAGTACCCACATTTACTTTCTTGTAGTTCAGCATCTCTCTAATTACAATTATATTTTATGTCCATCTT--CTCAGAATTCTTGGAAAA--CAACACTGTATATAA--ATTAGTATAAGCAGGT-----GGGCTACT-AACATTTTCTTGCAGTTTAAAATA-------CTGTGATCGAAGTGTGCAACCAGTGTTTCTTTCCAAATGACCTGAAGTC-------AGCTGACCCAATACAAAGGTTTGGAAATAAAATTAGACTTAATATATTATACCCCATGGGTAACCAGCTTGAAAC--TAAGTAAACATATA-TACATATTAGTCATTTTGACAAAATACCTCATAATTAATTATAAGAATATATTTAAAACTAAGTAAAATTTGGACAACATTGTAGCTTCTCCCGTAATGATTTGATTTT-----------TTTGCAAGCAGATGCTTGACTGTTACATGCAAAACGGACATGATATTGACTTTGTTTTCTTGTTATTTACACATTGTGAGCTTCAGGTTGTCAACATTGTGACACTGACAAGGGAAATTATATCTCACTAATGTTTACCAGTCACTACACATGTCAAAGACTTCAACTTTTTATAAAGCAAGGATTAGATTTACCAGCCTACACTCTTTTC----TTGCTATATGCAATTCTTTTAAAATAACTTTTAG---------------TCTTATAGTTCTTTGAAT-------TTGAAAAATATTTCCCTGTGTGTAAGTTT------CATGTTCCAA--------TAAATATTGTCAATATATCATATAATTTTATTTAGCTAATTCATTCATGAATGCTAAAAAAAAAAATAAATCTTCAGGCCTTTCAAGACTTAA--CTTGTTTTCTTATTCTCACTCTCTTAATGCCAATGGGGAAAAACATTCATTTTTGTAAGTAAAGAGATATGAAGAATATTGGATGTGTAACCATATTGTAGTT chr4 - 94230402 52313347 52313346 52314428 41915975 41915974 41917056 1082 CTAATATATTATGATAGCTGAAGTAATACGTTCTGGTTAT------AATTGGTTGCCCACTACTGATGTGGGTAATGGATCTCTCCTGTGAAACACAAACAGTAACTAGACGCACAGCATGCAGGTAAGTTAAGTACCCATGCTACCCAGGAATCAGCAGGTATTCTTCATGACTTAGTCTCCAGACATATTTTCTGGAAGCTCAGCATATCTCTAATTGCAATTATATTTTGTGTTCATCTTGCCTCAGA--TCCTAGAAAAGGTGTTTCTGTGCATAAATATTTAAATATGAAAGTAAAAGGTGATATTGAGCATATTTCTGCAGACTGAAAGAAATATATCTGGCAGAGATTTTTTTTCACAGAATTCCCGTCTCTATGAATGGAGTTTGTTTCAAGGATAATTCATGTCCCAAACTGTAAAATCAAATCAAATCT-TTAAACTGGAAACTGTGAGTCA-CGTTTTGATATGGCAAGTCTTCATATAGTATGTTTCCTTCAGT---------------ATAATCAATAGCATTAATAAATCAGTGGATTGACTGAATTCCAAAAGGATGGTAGTCTCTCACACAATACATTGATTTTTGTTTTCTCTGTGTGAACACAGAAACACTGTAGTTAAGTGCACAGTTGGCGTAATATTGACTTT-TTTTCCTGATATTTAGTCACTGAGTGGTCAAGGT-----------------TGGCAAGGGCAATTATAACCAACCAGTGTGTATCAGTAGCCAT---TTTCTAGGGCACTCGTTTTCCCCAAAATGCTTCCTGTTCTTTAAGGCCTACTCTCTTTTCAGTTCTGCTAAAAAAAAAACTTCCAAAATCAACTGGAGACAAAATTTACATCCCCTCAAAGTACTATTAATGAGCTTGTTCAAAAA----------TGTGTATGCTTGCAGCAAATGTTTGCAGATCAGCTTAAGTTTTTTAAATACTTTGTTTGGTTTCTTTCAGTAAATCCAGTTATGGCTGTTGCAGAGCAAACCG----TCAAAACCTTTAAAGTCTTAGCCCCTCTTTTCCCATCTTAACTGTTTT-ACACCTTTCTAAAAAGAC-TTCA-------AAAAAGAAAAGTGCAAAGAACGTCGCATCCAAAACCACATGCTGGTT ..:.::.......x.x.:.x....:.x.::.x:..:.:..------......x..x......x...:x..::......:.x.:..:x.--...:.....:....----..:.........................:.x::x:....:..........:.........x......x...x:...x.:x..:.....x.x..:.......x.........:............:...:......--......--..:.:.....--::x:x....::....--...x:x...x.x.:..-----.x.x..:.-.:...x..::.....x:.:...x.-------...xx.xx..xx.x.x:xxx...x:..:.:x..:xx....x:x..:x.:-------:.x.:.::..xxx.xx.:::.xx:....x....:.:.::.-x..x.:.:x.xx.::..:..x.-.:x:....x.:--:....xxx......-..::.x.:xx...x.---------------.....:...x::.xx....x..:x:x::x.x:::x:....:x:.x.:x..x....::....x.::...:xx........-----------.x..x.x:....x:.x:x::x....x:....x.::x.:.:.:...........-.....:..x......xx..:..x.x.x.:x....-----------------..:......x.......x.:x..:.:...x..:....x:.:.:---.x..x.:.:.x::x::...::x:...:::xxxx:.:xx:..xxx:......x........----:.....x.x:x..xx...::.....x.x:.xx..---------------:..:.x...x..x.x...-------..x.....----------......x.:..------x.....:xx.--------...:.x..x.x....:x.::.x.::...:x..:..:x...:..x.:...:x..:.:x.:.:x...x::----.:x.::.....x...x....:--.:.x.....::..::.x...x.:..-.::..xx.xx::...:..-....-------..:x.:.:.::.:::.....::.:.x..x::x.....:..xx.:... 40M6D42M2I14M4I135M2I6M2D10M2I15M2I16M5I8M1I24M7I49M7I40M1D22M1D11M2I14M1I15M15D79M11I53M1D34M17D43M3D60M4I34M15I18M7I8M10D11M6I10M8I68M4D21M2I25M1D18M1D4M7D47M 628/994 63.2% 1082/94230402 0.0% 157/994 15.8% 129689649 60524906 +3264 chr4 + 190214555 182014123 182014122 182014187 65 TATATACATATACACACACATATATACTTA--TATATATACATATATATACATATATATATGTGTGT chr4 - 94230402 71630139 71630138 71630205 22600198 22600197 22600264 67 TGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT .::..:..............x......x..--.x.:...:...:.:.x.:...:.:x.......... 30M2I35M 50/65 76.9% 67/94230402 0.0% 2/65 3.1% 110383984 79830571 +16736 chr4 + 190214555 182042133 182042132 182042738 606 ATTTGTTGGGGAGTTCTCTTGTTCTCAGGAAGTCTTAATCCTTTCTGATCAGCACTTACATGTCAACCTTAGAGAATTAAACTTGTACCTGGTTACTTTTTTCTCTCTCCTTGATATAGC---TCAATGCGTTTTCTCAAATGGTAACCATGGTCTAGCAATTTAAAGCCTTTGAACCTTGTGAACAGATTCATTTAAAACCATATTCTGAGGGCTTT---CCATAAAATGGAAAGTGTCTTCTACCAGGAAGCTACAAAAGAATTTACAAGAGAAAATCTGCTAAGTGTCCCCCTCAG-GATGAGTGTACAGTAACATGTCC---AGAAGATCCAGTGTCCTAGAGGAAGTCATTCACAAAGGTCCTG-ACTCTTTGGGCTTAATGGGTTGAACTCTG-AATTTCTTTGCTTTCTCCTAGTCGATGCTGTGTTTCTTATTTTAATACAAAATTTAGCAAAAAGTTTTCATGAAGTAAA---GGACTTTCTAAATAAATTACAAAATAATTATAAAATACGAATATGTAGGAATGTCGACATTTTTACATCAGAGAAATTGAGTTATACGAGCATATTTCTTTTTGATGCTATTCATTCAAAGACAATATATTAAGTTTTT chr4 - 94230402 52321685 52321684 52322275 41908128 41908127 41908718 591 ATTTGGCAGTGTTCTTTCTGGTTTTAACCAAATATTAGTCAGT-CTGATCAGAACTTGCATAGCAACTATATTGAATCAATTAAATACCTGGTTATTTTTTTCTTTA-----GTTATAGCAAATTGATTTTTTTTCTCAA-TGGTAGCTGAAGTCGGATCATTTAAAGCTTGTGAACCTCAAAAAAGGGTTTGTGTAAAACCGTGTTC--AGCATCTTGTGACACCAAATGGGAAGTGTGTTCTTCTGTATGACTACAAAAGGTTTTAGTACAGCTA-TCAAATGCGTGTTCTGCTCATTAATGTTTGTACAGTATCGTGCCTTAAAAGAGCTACAGTTTCCTAGAGCAAGTCATTCAGAATTCGACTACACTCTTCAAGTTTAATGGGTTGAGCTCTTTGAGTTCCCTACCTCCTCCTGATTGATGGTTTGTTTCTTCTTTTAATACAAAATTCAGTAAAA---TTTCCCACAGTGAAAATGGTCTTT-----------------TAATTATAAAACACCAGCGTGTGGGAGTGATTCAATTTACACATCAGAAAAGTTCAGTTACTTGACCATAATTTATTTTTGTGCTGATCATTTACAGACCACAGATTCTTTTTTT .....x::.x.xx:.:...x...:.x.xx..:.x...:..xx.-........x....:...:x....:x..xx....:..x:xx:..........:........:.x-----.x......---.::..x:x.........-.....:.::x:...x:::x.........:.x.......::x:..x:.:..::.x.......:.:...--..x:::..---x..:x......:......x....x.::x:x::.........:x....xx.x..xx.-..x:x.:x....:.:x....x-:...xx.........x.:..:.:---.::..x.x....x........x..........x..xxxxx..:-......:::.:............:....x-:.x...::.:.:.:.....::.:....x.x........x...............:..:....---....x::x...:..---..x....-----------------...........:..x.:::...:...:..x:xxx....x:........:..:..x.....:x:..x....x..:x....x:....:x.....:.x....x.:.x...xxx..... 43M1D63M5D8M3I17M1D67M2D8M3I56M1D21M1I23M3I43M1I29M1I62M3D14M3I7M17D115M 395/576 68.6% 591/94230402 0.0% 45/576 7.8% 129720448 60494107 +3100 chr4 + 190214555 182047043 182047042 182047116 74 TGCCAGTTTTCTGTTGAAGTCATCTTTCTTGTTAGCTTCTGACTAGAAAGTTCTGCTTTAGGAAAGATTACCAG chr4 - 94230402 3385670 3385669 3385743 90844660 90844659 90844733 74 TGTCAGTTTTCTTTGTAAATTACCTTTCCTGTTAAATTTTCAGTTCAGTCTTCTGTTTTTAGAAAGATTAACAG ..:.........x.xx..:.:.:.....:.....:x..:.x.x.xx.:xx.....:...x:.........x... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 178661373 11553182 +27706 chr4 + 190214555 182056101 182056100 182057279 1179 TAAATGTCAGTGTCCCCACCAAGATCCCACTGAGTTACGTGAAATTCTCCAAAAACCCCTCCAACAGGAGAATTTATAAGCTCTGCATGCTCAACCGTCTTAATGTGTAAAACCGACTGAGAGATCTAAGACTAACTGTATGCAGCTCAATTCCAATTTGTTTGTTTTTAACAATGTCTTTGACATGTTATACATTATGTCACGTTCCAATTTGATGAAAATGTCTTCCCGTGTCCAGTAAGAAATACGTTTTAAGAAGCAG-ACCAACTACACTGTTATTTTCCTTGCTGTTTTCGATGGCAGGCACTTTGCCACATCTTCTCTCTTCAAAAGATCATTTATCAACAACAGAGTTAGCTCCTGGTAAAAGAGTCTA---ACTTAGACTGGTGTCCTTCTCATCTACCCACCTCTGAGAGCAAACTGAAGTGTTTTGCATTTTACACAGGATAAACCACCTTTAAAAAGACTGCAGCAACATT----------AGCTCCAAGAATGATATTGCAAAGTTTGCCACTA------------TTCTTTTGAAGAAAGGAAATT--ATCTTGGCTGAAGCTAAATGCCGGCAGCTGCATGCCATGTTCTCTGAAAACAGCAAATGTCCTTTAGTTTAGTTTATCTGTGGTCTGCCTTGGTGTTATCCACTGTTAATTCTTAGTAGTACAGAACAAT--CCTTAGAGGAGCAAAGAAACATTTATTCAATGCAATCAGTGAACAGAGAATGGAGGGAGGTGGGTGGGGGATAACAGGAGCTGGGGAGGAAGAATAGGAATTCTTACAAAAGTTTGGAG---------------TTAGGGGTCCTAGTGGGATTCCTCCCCCTTTTAACAACAAAGTGCAGAGTGAAAGAATATGTTCAGCTTACTTTGTCTTCCTGCTTCGTTTGATCTGAAAGAACAATCAGATACGGCTGATTTCTGAAGACTGTTCAGAATAGAGAGATCTCGAATGCCCC-AGTGATAGCCATCGTTGTCAACAGGAGGCATTGCAGGCACTGACACCAGCACCTGAAAACGCTCAGATGCTCAACACTTCATCTTTCATTTCAAAATCTACTGCTGGGAATTCTCTTTATACAATGCATTGGATGATAAGTATTTAGAGGGGGACTGGATCCTGGAGGAGAATAAAGCATGGACCTCAGAGACTGGGATTGAACACCGGAGGAATCAGACATTTTAAAGTCAGAG chr4 - 94230402 52326705 52326704 52327744 41902659 41902658 41903698 1040 TAAATGTAGAGATCCTCAGCAGCGTCCTGCTGAATCTTGGAAAAGTCTCCAACAA------------------TTACA----------GCTCCATC-------TGTGTAAAGCTGAATGTGAAGCCTGAAATGTACCATATACAA------TCCAATCTCTGTTTTTTCAACAAAA-CTTTGACGTGTGGTATTTCACATCTCTTT-------------------------TGCC-------------------AGAATCAGTGTTAACTATGCTGTGTTTTTATGTGAGTTTTTTAAAAAGAAAAAGATTGC----TTTTCTCTAATC-------TGCCTGTAAACAAT------------TGACAAAGGCACTTATGTACTTAA-------TTATTGACATTGAACCTGATGTAAGAGGCAGCACAAGC------TACCTTACACAA-ATA------TTTGAAAGATAGGGTAACAGTGTCTTAATCCAGGAGCTCCAGGTGAGACCTTGCAAGTATTCCTATTGCTGACTACATATTTATAGTGTGGAAAAAAAGTCTAATCTCAGCTG----TAAGTGCTGAGAATTACATGTGATTTTC-CTTAGAGCAATAAATGTTCTTTTGTCT-GTCTA-----GATTTTTCTATATGTTTTGCAC-ATTAATTCCTAACAGTGCTGTTCTATGTCACTAAAATATCAAA--------------ATCTAATCAGTCA---------------------------GATGGCAGTAAATGGAAAAAAAGA-TAGAAATTCATAGCAAAGATTAGTGATGTCTAAAAGTGGTTTATGGGTCCTAGTGGGATTCCTCCTT-TTTTAACAACAAAGTGCAGAGTGAAAGAATATGCACAGCTTACTTTGTCTTCCTACTTCTTTTGATCTGAAAGAACAATCAGATAAGGCTGATTTCTGAAGACAGTTCAGAATGAACATATTTCAGTTGCCCCCAGTGATAACCATCATTGTCAACAGGAGGCATTGCAGGTACTGACAGTAGAGCCCTAAA-TGTTCAGATACTGAACATTTTATCTTTTATTTTAAGAACTACTGCTGAGAACTCTCTTTATAGAATGCAATGGATGATGAGTATTTAGAAGAAGAATGAACCCTGAAGGAGAATAAAGCGCAAGCCTCAGAGATTGTCAGTGAACACCAGAAGGACAGAAAAATTTAAGGTTAAAG .......x::x:...:..x..:x:...::....:.:x:.x:...x.......x..------------------...:.----------....x.:.-------........:.:..x..x..:::..:.:.:xx..::...:..:------......:.x.x.x....:.....x:-.......:...x:..:x.:.::..x.x..-------------------------..:.-------------------....x...-:::.....::....xx....x:x..xxx....::.x::x.::x.xx....----.:......xx..-------::::.:.x.....:------------..::...:.x:::..---.....:-------.:x..xx...:x.x..xxx.x.:....xx.:.xx...:------:.::.......:-...------:..x...:.x.xx.:.:..:::.:----------.......:.x:x..:x......:xx..x.:.:.:------------..x.xx..x:....::..:.:--....::....----...:...:.:x.::.:....:x..x...-..x.:.:..::......:....x..:.-..:..-----.:.:.x:..xx:....x.x...-:.......:..::...:.x.xx.x..--.x:..:.:x.x....--------------..x:.......x.---------------------------...::...x.:x...::.::....-...:.....x..xx....x..:.x.---------------...x.....................::-.................................:x...................:....x.........................x.................x.........::.x.x..:..::x......-.......:.....:.......................:.......x:..x:..:x...-:.:......:..x....:..:......:....:..:.x.........:...:..........x......x........:..........:.::..x..:.:....:.............:::::.........:..xx.x........:..:.:.:x::.x.x.....:..:.:.. 55M18D5M10D8M7D42M6D25M1D29M25D4M19D8M1I50M4D12M7D14M12D15M3I6M7D38M6D12M1D3M6D24M10I34M12I21M2I10M4D28M1D27M1D5M5D22M1D26M2I15M14D13M27D24M1D25M15I27M1D133M1I58M1D176M 705/994 70.9% 1040/94230402 0.0% 231/994 23.2% 129729396 60485159 +23058 chr4 + 190214555 182062417 182062416 182063168 752 CTCCACATTG--ATTCTTTGCTAATGACATTGGTTTAAA-GATTATCTTGTTTATTTTT--CACATGATGACTG-AAATATCTATGCATGG-TATTACTTTTATATGTAAAGTTATACCGTGTTGACAGATTTTGTAGTCTTTTATATGACAAGGCAGTATGAAACAAAACCTTTCCATGACTACCAAAGAAAGCAATGGGGTTAAATGACAGAGCTTTCCTAACTATTTGTCTGTCATAGAGAACAGTAAATTGCAGCCTGTCTCAAGGTTGGTGTTTAGACACATTCTCAGATTAACGGTTTTGCATAGACACTTTGGACTCCAAGTGGTTTTGAGATGAGCTCCATCAAGAATATCCT-CTGGCCTAAACTAAGCAGAGGGTTTTGAGAAGTTTAGTATGAACTCTGTGAAAGGAAATTTGATTGTT---AAACAGACTATAT---------CGATATGGCTCTCCTTGTCTTTAAAAAATGAAGAAAGGTT-----TTTAGCTAAATCTATAGTAACTGGTCCCATTAATGTCTTA--------CTTTTACAA---CTCCAGAGCAGAGAGTTATGTTGTTTTCCACAGA-ATGTTTCAACAAGACTGTGCTTTTGTACTTAAAGAAGCAGATATCCAAAGAAACTTTTGATATGATAAATGAACAATCACAAAGAAA------AAGTTAGTTAAGTAGTATGAGTCACATGAGAAAACAACTCAG-CTAAGAATGTGCTGATTCATTCATTTTCAATAACATCAGTTTATTTTTAGTGCTGCACTGTAATC chr4 - 94230402 52329529 52329528 52330309 41900094 41900093 41900874 781 CTTCACGTAGCAAGTTTTTGTCAATGACACTGATCTAAAAGACCACCTTGCTGACTTTTGTTTCACGTTGACTGGAAAAACCTACATGTTGCTTTTATTTTTTTATGTAAAGCTACACAGTGTTGACAGATTCTGTAGTCCGTT-TATGACAGGACAGTATGAAAACCTTTCTTTCCGTGCCTACCAAAGAAATCATTGAGGTTAAATGACAGGGCTCTACCAGTGATTTTTCTGTCACAGAGAACTGTAAATTGCAGCCTGTCTCCAAGATAGTGTTTAGACACATTCTGAGATTAATGGTTTTGCATAGACACTTTGGACTTCAAATGATTTTGAGATAAGCTCCATCAAGAAGGTTCTCCCAGTCTGAACTCAACTGAAAGTGCTTTGTATTTCAG--TGACGTTTATACA---AAACTTTGTTGGTACAAAACAGACAGTATGTTATAAAATGAAATGACATCTCTTATGTTC-CATACTACAGAAAATTTTCACCTCCAGCTTAACTCTTTGTGACAGATTTTATT--TTTCTTATATAGTAGCTCTTAACAGTTTTCAATAACAGACAGCAATGAGGCATTATATTTACATGATTGAA-AAGCCTGTACTTTT-CCCTTGAAGGAGCATAGCTAGCAAGGAA-TGTCGGTATCCTAAATGAGAGAAGAGGAATAAAATTCTTACTTTAACTGAGCTGTAAGAGCC---TAAGAAAGCATCTCAGTTTGGGAATGTGCTAATTCATTCACTTTTCCAAACCTCAGCAGATAATTTGTGTTCTGCAGTAATC ..:...:.x.--.x.:....::.......:..:.:....-..::.:....:.x.:....--:x..:.x......-...x.:...::::.x.-.x...:....x.........:..:..x.............:.......:x..-.......:.:..........xxxxx:......:..x............x..x..:.............:...:.x.:.::x....x.......:.......x...................x.:.x.:.................x.......:........................:...:..:.........:..............x:.:..-.::.:..:....x.:.x..::..x:.xx.x.x..:..--...xx.:.:.:x.---...:..x:...x.---........x:...---------:..x...:.x:::...:.x..:-x.x.x.:x.....:x..-----.::....x..:::x.x..:..x.:.:::...--.x.....--------..:...xx.---:..x.x.:....x..:x...xx.:x..x:.:xx.-...x..x..-...x....:.....-:x...:...:....x.xx.xxx...:..-.x.:.:...xx.......:x:.xx.x:..x...------.xx...::.:..:x...x...:.---.:.....:..x.....-:.::.........:.........:...:xxx...x....:xx..xx..x...:.x::.x...... 10M2I27M1I19M2I13M1I16M1I52M1D216M1I37M2D13M3D13M3I13M9I22M1D17M5I31M2D7M8I9M3I34M1I9M1D14M1D28M1D33M6I23M3D16M1I65M 525/737 71.2% 781/94230402 0.0% 59/737 8.0% 129732888 60481667 +3118 chr4 + 190214555 182076194 182076193 182076254 61 CTTTCTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTT chr4 - 94230402 76182411 76182410 76182471 18047932 18047931 18047992 61 CTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTT ....:.::x..x.....xx:.......x............:...x.:..xx...:...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 105893783 84320772 +22160 chr4 + 190214555 182082679 182082678 182083415 737 AATGCTGACAGTGATAACCACCAAATA-CAAAACAATAAGATGGGAACATGATGCCACGTGTGTTTTCAATACCAAAGGTATCTACGAGCCTAGTG--TTTCAAGAAATGCTAAAGTGTGCATGTCTATGAATATGTA-GTACGCAATCCACTT---CGTTCTGCCTACTCTGAACGGCCTTTATTAAGGGGTATTTTATGTGGATTCTGTGTGATAGAGAAAAACGTGCCACTCCTTGGCAACATAATATAC--TAGACCAGTTCTCTTTTTTTGAGATGTCAAATATCTACTTTATTATAGTGAGAAAGTGACAGTCAATTTAAATCAAAATTTATGGGGAACATTAGTAGCTGGAAGGACTTTGGCTAATCACTGTAATGTCCCCAACAAATGGTAAATGAAAGCATAAGGAAATTGAGTTAACACAAGTTAAAAGTTCACATACTTAAGGAATTATATTAGAAGA-----CCTACAACTTAATTAAATTATCTGAAACTGCTCATTTAA----CTTCTATTGTACTAGTGAACATTTATGCAATTTTACTGTTAGATATGTATTAAGTAATAGGTTTGGATTGGGTCAAATTGGGAGAACCCTAATGAGGCAGAACAGGGGAAAGTTTAATCCATCATAAA---GCATCATTCGGAATCTTTATATTGAATATTATTAGGCAGACATTTCCCTGGTTAGCTGGTTACTCTCTTATATCTATCATTCTGACATTTTGAATAATTGAAAAATCAAA chr4 - 94230402 52333989 52333988 52334713 41895690 41895689 41896414 725 AGTTCTGACACTGCTAATAGCTTGGTAACAAAACAATTAGATATGAATATAGTGTTATTTAGCTTGTCAA-GCAAAAGACACACAGTATCATTTTAACTCCCAAAAGAATCAGGACTGTAAAAGTGTCTGAGAATGCACTTGTTCAGCCCACTTGCCTGCTGTGGCTACTCATGACAGTCTTTATTACAATTCTATTTTTGTTGATTTTGAGGAACTAGAAAAATTTTG----TTCAAGCAAATGTAATATACAGTAGATTGGTTCC----TTCTAAGATGTCAAATACCTACTTTATTATAGCGAGAAAGTGACAGTCAATTTAAACCAGAATTTATTGGGAACATTAAGAGCTGGAAGGGCTTTGGCTAATCACTCTAATGTCCCCAACAAATGGTAAATGAAAGCATGAGGAAATTGAGTTAACGCAAGTTAAAAGTTCACATACTTACTGAATTATATTAAAAAAAAAACCCAATGACCTAATTAAATTATCTGAACCCGTTCATTTCAGTCTGTCCTCTTACACTTGTGAATACATATGGTAGTATTTTCTTAGATGCATAACAGTTTTCAGGTTGAGCATGCATCAGAC----AGAAAGCCAATGAATGAGATCA----AAAGATGAATTATTTATTAATGTGCAGTATCCTGAATAGTTGTTCTCAATG--ATAAGGAGAGTTTTGCATTGG--AGCTTGT-------TTATACCCTTCATATTTGTAATTTAAA-----AAAAAATCAAA .:.x......x..x...:x:.:x::..-.........x....:x...:..::..::.:x.:xx..x....-:.x....::.:x:.xx.x.x.xx.:--.::...:.:.xx.x::.x...:x.x..x.x...:x...:.-x.::x..::......---:.:.x..x......xx:..:.:........x::xx:xx...x...x....:..x.x:.:x:::....x:x..----.:.xx.xx..::........--....:::....:----..:.:............:..............:.......................:..:.......x..........:x..........:...............x................................:................:.......................xx...........:..:.-----..x.::..:.................x.:.:......x.----x.:..x..::...x.....:.:x....xx.x.x.x:.x......:::..x:.:x.xx:.....x:.xx..x:...:.:----....xx.:.....:xx...x..----....x.x...:xx.:..x..---...x:..:.x....xx..:.x:.x...:--..x...x::::x..x.x:...--....x..-------.....:.:x....x:.x::.x...:..-----:.......... 27M1I42M1D25M2I40M1I15M3I72M4D20M2I12M4D198M5I39M4I78M4D22M4D20M3I28M2D21M2D7M7D27M5D11M 493/704 70.0% 725/94230402 0.0% 54/704 7.7% 129748690 60465865 +19809 chr4 + 190214555 182084799 182084798 182085888 1090 TACATAATGAAAAATCTTTCATGTATAAATCACAAGGCATTTATATCTAACTTACCTCAC-AAGGTGGCAAAATCCCATAAATTCCTCCATTAAACCTGAGTGGAAGATAATAGCCTTCTTGAAGCCCAG--CAGTTCACAGAAAGCCTATCACCCTTCTGAACCGTATGACAAAATGCAGAGAAACATCCAAAATACCAATACACTGGAACTGCCTGAGAATGCGTCTCCTAAGACAA------------TTTTCCAAAATCTGTCATCTGAACGCTGTTTGCCATCCATAAAGAAAGAGGAAGAGGAAGGGGAGGTAGAGAATAATGTT--GGCTCTG----------TGAAACCGCAGCATTCTTTCCAGATGGTCT---------------------------------CTT----------------TTTTCCACAG-CTTAGGTTACCTACATG--------ACAAAAGGATAAGAGGCCA--GGGGTGAGCACTCTTTTTTTG-------------------------------------TAAAACTGAGAACTCCAGACATTTGTCATCCAGAAAAAATGCCTGCTTCTCAGCAGGATAGATTTTTAAAAATTTTTCTCAGTGCCTTT-------CTCTAATTGGGCTTCCTCAACTTTTCACACATCCT-----TGCCCTGAACCAGTCCACAAA--AGCCAAAGT-TCTCCCACACCTAG-TCACCAATGGCAGGCCCATAAATCACAAGAAATTACACACGATTTTTTTTTAACATTATGCAATT----------------AACGCCTATAATGTGGGAAAA-CATTTTATAATATATAAC--ATATTAAAGCAATAGGAAATAGCATGTCAGATTTCTCATTAGTAAATTCTAATAATGGCTAACATAAAAATGTGCCTATCTATTAATATTTTTTCTTCAATTCACACTTAAAAGAAAAATATTACAGTGTCTT--GGTATCTGTGCAATGCTCATGTAGGAATTTATTATGCCAAAGTGATCTGGCGTGCCTAAACTAGCATGAGCAATATGAAAATTTAAAGATA--GCTG-AATGCCCATTCTTTAATTTTACTAAAATAATGAAAAACATATATTATCTGAGCTTACAAAACATGTAAATATGAATTCAAATGGAGCATATATTTTCTACATATATATTGCGTTTTTCTACTCAGTATTAAAAACCATTTCTCTTTTTATGCTTTGCTTTCTTTTGT chr4 - 94230402 52336971 52336970 52338151 41892252 41892251 41893432 1181 TAAATGCTGAAACATCCTT-ATTTAAAATT---GAAATATTTGTACATATATTCCCTCTTGAAATTGATAAAATCTCACCAATTTCTCAATCAAATGTGAATGGAAGATAAAAGTCT-CTGGAAGTACAGACCAGCTTA--GGAAGCCCATTGCAGTCC--ACCAAGATAACAAACCCTAGAGTAACTTTCAAATCACTAGG----TATAAGAGCATGAAGATCTATTC---AAGAGAAGGATCTTTTTTCTTTTCCA-----TTCAGCCTGAATGCAAGGGGTTGTTCCCAGTGAATGAGAAAGAGGAA----------AGAATAACATTACGATTCTGCAGTACGTTCTAAAGTTCCAGCATCTGTAACAGGTAATCTAATTCCTTTCACTTAAGCTGCAAGCTGCGAGCCCTTGGTGAGGAATGCCACGTCTCTCACAGTCCTTATCCACCTCCCTGTTTAGTTCACCGCTGGTGAAAATTCCATTGAAACAAGTGCTCTTGCACTGATGTAAAGCTGGTCTATTACACCAAAATAATGGGCTCTAAGACTCAAAATTCCTTACGTGGCTC-TCGAGTGAAAATATTTACTGCT------------TTTTGAAACATTTTGAAAAAGACGTTTGGGGCTATTTTAGTGGGATTTCCTGAGTTCTTTTAACTTGCTGCTTTTTCTTTTAGAATGTCCAGGAGCTGGTCTAAGTACCTTTCCCTCCTACCTCACTGCTATACGTGCTATAAATCT-------TTGTGC-------TTTCATCGCATTATGCAATTGTTTTTGCTCTTGTGAATCCCACATAATACAGAAAAAATGTTTTCTAATATATAGCTTATATTAAAGCAATAGGATATAGTATGTCACGTTTCTTATGAGTAAATTCTAATAATGGCTTACATAAAAATGAGACTATCT-------CTTTCTCTTAGCTTTGAATTTAAAA----AGTATTGCAGTATCTATAAGTATCTCTG--ATGGCTGCATAGACATTCATCATACTAAATTGATTTGCCATGCCTGAACAAGCTTGAACAATATGAAATTTTAAAGATATTGCTGTAAAACCCATTCTTTAATTTTACTAAAATAATGAAAAGCATATTTTACTTTAGTTTACAAAACATTGAAATGCTAATTCATATGAAGTGTTTATATTCTTCACATATATTGTATTGTTGTATGTGGTATTAAAAGCTGTTCCTCTTTTTTT--TTCATTTTCAGTTGT ..x..:x.....x...:..-..x..x..x.---:.:::....:..:x..xx..x....x:-..:x..::......:..:x....:...x..:...:x...:..........x..:..-..x....:x...--...:.:.--.:.....:..::.xx.:.--.x.x:x..:.....x:x:....x...x.:....x:..:.:x----.:x..xx..x...::..x::.::---....x..------------.......-----.x:x::.....:..x:xxx.:::.:.x:.:x...x...:........----------.......::..--.::....----------.:..:::x......::x.xx...:.::...---------------------------------...----------------.:.::.....-.:.x:x::....x.x..--------..x:xx..xx..:.xx...--.:::::..::.....x:x:..-------------------------------------...:...x.:..:...xx..:.xxx..-..x..x:.....:::.:..x..------------....x...x.....xxxx.:x:.x...-------:.:..:.x..::.....x.::.:..:xx..x.x..-----.x.::.x.:xxx.....x:.:--:.:.x....-:..::.x.x....x-....::x.:xxx.xx.:.......x-------..:::.-------...:x.x:............----------------.x.x.x:.....:::.:....-::....x.........:.--.................x....:......x:.....:..x....................x...........x.x......-------:...:....x:x..::x.:......----.:....:....:...x--:......x..--...x:::::...:x...:..:..:.:...x....:..x.:.....:...x...x...:..........x..........--....-..x:................................:.....x...::.x..:...........xx....::x......x...:..::.x...x....x..:........::..x..x..:x::.........:.::..:........x.--..:::....xx.... 19M1D10M3D27M1I56M1D12M2I7M2D18M2D41M4D23M3D7M12I7M5D47M10D11M2I7M10I30M33I3M16I10M1I17M8I19M2I21M37I27M1D22M12D27M7I35M5I21M2I9M1I14M1I25M7D6M7D20M16I21M1I18M2I81M7D25M4D16M2I10M2D79M2I4M1I150M2D15M 694/1017 68.2% 1181/94230402 0.0% 237/1017 23.3% 129747828 60466727 +8636 chr4 + 190214555 182087451 182087450 182087764 314 GAGATCGTTTGGTGCTTGATGTCAATGAAT-CAGG--------AGCATCAGAACTATTTTTCTTGTATTAAGCTTTTAGGCTGTGTTTTGCCAACTTGCACAGGTTGAAGACAGCATTAATGTTAATGAAGGATGGAAGTCTGAGAGGCAGTGACTCTCACT---TCCCCACCCCCACCTTACTTCCTTTCATGCTAAATCCATTAGTATAGATGGATCGACATTAATACACAAGAAGGACAGAATCGCTCTCCATTCGGGGACAC-TTTTACTTGACCCTTGGCACACATTGCCCATACGTGGCCACAG-GACGT------TTGACCTATTCA chr4 - 94230402 52339507 52339506 52339821 41890582 41890581 41890896 315 GAGTTTATTTAATCCTTAAT---AATGAATACATGTGCCTTTAAGCAGAAGAGCTCTTTGTCCTGCA---AGTTCTTAGGATGTATTAAACCAGTATGCTGTAGCTGAAGATGAAATTAATATTAATGATGAATGGAAG-CTGAG-TTTGGTGATGCTCATTCTTTCCCCAGCCCC-----------CTACAAGCAAAATCCATTAGTATAGATAGATCAGCATTAAAAAACAGGAAGGACAGAACAGCTCTCAGTGCAGAGACACTTTTTGCATGACCTTTGATATGATAAGCTTGTGCTTGGTCATTGTGATGCCTCGAGTTGACCTATGCA ...x.::...::.x...:..---.......-..x.--------....xx...:..x...x..:..:.---..:.:.....x...:..xx:...::x...xxx:.:......:::x......:.......x.:.......-.....-xx::....:x....:.---......x....-----------:.x..x..x..................:....::......x.x...:...........:x......x:.x.:.:.....-....:.x.....:...::.::xxxx..:::.:.x...:..:x.-..:.:------.........x.. 20M3D7M1I4M8I24M3D69M1D5M1D16M3I11M11D79M1I43M1I5M6I12M 211/295 71.5% 315/94230402 0.0% 39/295 13.2% 129747944 60466611 +3778 chr4 + 190214555 182100444 182100443 182100564 121 AAAAAATATATATATATATATATACACACACACACACACATATATATATATACACACACACACATATATATACACACATATATATACACACATATATATAT-----ACACACACATATATATACAC chr4 - 94230402 4417332 4417331 4417457 89812946 89812945 89813071 126 AAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC .....x.xx.x..x..x.:.....:.............x:x.:...:::..:x:x::x::.....:...xx.x:..:x..x.........:..x...x...-----...x....xx.:.....x.. 101M5I20M 81/121 66.9% 126/94230402 0.0% 5/121 4.1% 177683112 12531443 +3106 chr4 + 190214555 182100446 182100445 182100518 73 AAAATATATATATATATATATACACACACACACACACATATATATATATACACACACACACATATATATACAC chr4 - 94230402 24136190 24136189 24136262 70094141 70094140 70094213 73 AGAATGTGCATATATATTTATGGAACTGTTTATATACATATACATACAAACAAACAAACACACATATTTACAC .:...:.::........x...:x.xx:::x:.:.:.......:...:.x...x...x.....:....x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 157964256 32250299 +3279 chr4 + 190214555 182100453 182100452 182100557 105 ATATATATATATATACACACACACACACACATATATATATATACACACACACACATATATATACACACATATATATACACACATATATATAT-------ACACACACATATA chr4 - 94230402 4417343 4417342 4417454 89812949 89812948 89813060 112 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATA ..x..x.:...................x:x.:...:::..:x:x::x::....::...xx.x:..:x:.x.....:...:.:x...x.....-------....xx....... 92M7I13M 69/105 65.7% 112/94230402 0.0% 7/105 6.7% 177683110 12531445 +3698 chr4 + 190214555 182100454 182100453 182100580 127 TATATATATATATACACACACACACACACATATATATATATACACACACACACATATATATACACACATATATATACACACATATATATATACACACACATATATATACACACATATATATACACAT chr4 - 94230402 73121102 73121101 73121216 21109187 21109186 21109301 115 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGT------ACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCAC------AGAGACACACATGTATAAGCAAAT .:.::..::....x..:.....:.:.....x.x::..:x:.------...:..:....x:.....:x:.....:.:x::.......x...::.x...------.x.x........:....x:..x.. 41M6D50M6D24M 77/115 67.0% 115/94230402 0.0% 12/115 10.4% 108979352 81235203 +3189 chr4 + 190214555 182100457 182100456 182100576 120 ATATATATATACACACACACACACACATATATATATATACACACACACACATATATATACACACATATATATACACACATATATATATACACACACATATATATACACACATATATATAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-----CACAAACACTAACATATAAAC ..x..x.:...:.:.............x:x.:...:::.::x:x::x::..:..:...xx.x:...x..x...:........x...x..:.::.-----:.:.x....xx.:.....x.. 94M5D21M 72/115 62.6% 115/94230402 0.0% 5/115 4.3% 177683114 12531441 +3037 chr4 + 190214555 182100469 182100468 182100516 48 ACACACACACACACATATATATATATACACACACACACATATATATAC chr4 - 94230402 1470663 1470662 1470710 92759693 92759692 92759740 48 ACACACACACACACATATATATATCTCAACACATGCACAAATGTGCAC ........................x.xx.....::....x..:.::.. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 180629806 9584749 +3286 chr4 + 190214555 182100483 182100482 182100546 64 ATATATATATATACACACACACACATATATATACACACATATATATACACACATATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC .:.x.......x.....x.:.......:..:.:x.::.x.:....x.....:::.......... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 164579734 25634821 +3039 chr4 + 190214555 182100489 182100488 182100556 68 ATATATACACACACACACATATATATACACACATATATATACACACATATATATATACACACACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ...:.x.::..:...x.::......:....:...:....:.x...:...:x..:::..:...:.x:.. 68M 45/68 66.2% 68/94230402 0.0% 0/68 0.0% 174504076 15710479 +3130 chr4 + 190214555 182100502 182100501 182100570 69 CACACATATATATACACACATATATATACACACATATATATATACACACACATATATATACACACATAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:...x..::.....x.::......:....:...:....:.x...:.:..x..:::.::...:.x:.. 69M 46/69 66.7% 69/94230402 0.0% 0/69 0.0% 174504090 15710465 +3308 chr4 + 190214555 182100520 182100519 182100581 62 CATATATATACACACATATATATATACACACACATATATATACACACATATATATACACATA chr4 - 94230402 7596412 7596411 7596473 86633930 86633929 86633991 62 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA ....:.x..:..:...x..:...........:...:....:.x...:...:x..::...::. 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 174504108 15710447 +3492 chr4 + 190214555 182100521 182100520 182100636 116 ATATATATACACACATATATATATACACACACATATATATACACACATATATATACACATATATATACACATATATACACATATATACACACATATATATACACACACATATATAC chr4 - 94230402 4417349 4417348 4417457 89812946 89812945 89813054 109 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-------CACAAACACTAACATATAAAC .:.............:.:.:.x:x...:..:...:x:x:.x::.....:...xx.x:...x..x...:...:....x:.:x.....:.-------:.:.x....xx.......x.. 88M7D21M 72/109 66.1% 109/94230402 0.0% 7/109 6.4% 177683172 12531383 +3829 chr4 + 190214555 182100525 182100524 182100660 136 ATATACACACATATATATATACACACACATATATATACACACATATATATACACATATATATACACATATATACACATATATACACACATATATATACACACACATATATACACATATA-------TATACACATATATACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAAT--GCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ..:.:.......x.::..::........:.x.::::........::.x..--:....:.::..x.::.:.:.:..x.:.:x.:.:....:.::x..:.:::.x...:x::....x.::.-------.:.:.x.....x:.... 50M2D67M7I17M 81/134 60.4% 141/94230402 0.0% 9/134 6.7% 93084443 NA +3122 chr4 + 190214555 182100534 182100533 182100599 66 CATATATATATACACACACATATATATACACACATATATATACACATATATATACACATATATACA chr4 - 94230402 66904846 66904845 66904911 27325492 27325491 27325557 66 CATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCA .......:..:::.......:...:.:..........x..x::x..x:.:......xx:...::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 115195688 75018867 +3252 chr4 + 190214555 182100534 182100533 182100602 69 CATATATATATACACACACATATATATACACACATATATATACACATATATATACACATATATACACAT chr4 - 94230402 7596412 7596411 7596480 86633923 86633922 86633991 69 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ....:.x..::.:...x.::......:....:...:....:.x.......:x...:..:::.::.x... 69M 47/69 68.1% 69/94230402 0.0% 0/69 0.0% 174504122 15710433 +4160 chr4 + 190214555 182100537 182100536 182100652 116 ATATATATACACACACATATATATACACACATATATATACACATATATATACACATATATACACATATATACACACATATATATACACACACATATATACACATATATATACACAT chr4 - 94230402 73121107 73121106 73121216 21109187 21109186 21109296 110 ATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATA------TGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..::....x..:.........:.:.x.x:...:x:..:.:..:....x:.....:x:....------.:.:x::.......x....:.x....x.x.:......:....x:..x.. 61M6D49M 75/110 68.2% 110/94230402 0.0% 6/110 5.5% 108979430 81235125 +3295 chr4 + 190214555 182100575 182100574 182100638 64 ACACATATATATACACATATATACACATATATACACACATATATATACACACACATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x.....x...:...:.:..:.:x.::.x.:....x.....::........:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 164579826 25634729 +3110 chr4 + 190214555 182100596 182100595 182100647 52 TACACATATATACACACATATATATACACACACATATATACACATATATATA chr4 - 94230402 28470366 28470365 28470417 65759986 65759985 65760037 52 TACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ....:..:........x.:..:...:..........:....x..:.x..x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 153630230 36584325 +3161 chr4 + 190214555 182100597 182100596 182100664 68 ACACATATATACACACATATATATACACACACATATATACACATATATATACACATATATACACATAT chr4 - 94230402 7596413 7596412 7596480 86633923 86633922 86633990 68 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT .:...x..::.:...x..:...........:...:......x.:.....:x:..::.:::..:.x:.. 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 174504184 15710371 +3032 chr4 + 190214555 182100606 182100605 182100676 71 TACACACATATATATACACACACATATATACACATATATATACACATATATACACATATATACACATATAT chr4 - 94230402 71630135 71630134 71630205 22600198 22600197 22600268 71 TACGTGCATGCATATACACACACAAATATACATATTTTTGTATGCATGTGTTTGCATGTGAATATGTGTGT ...:::...::.............x.......:..x.x.:..::...:.:.x::...:.:x.:.::.:.:. 71M 46/71 64.8% 71/94230402 0.0% 0/71 0.0% 110470471 79744084 +3286 chr4 + 190214555 182100613 182100612 182100722 110 ATATATATACACACACATATATACACATATATATACACATATATACACATATATACACATATATATACACACATATATATACACACATATATATACACACATATATATAC chr4 - 94230402 4417349 4417348 4417457 89812946 89812945 89813054 109 ACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC-CACAAACACTAACATATAAAC .:...............:.:.x:x.....:::..:x:x:.x.::...::...xx.x:...x..x...:........x...x:.:.:::-:.:.x....xx.:.....x.. 88M1D21M 69/109 63.3% 109/94230402 0.0% 1/109 0.9% 177683264 12531291 +3295 chr4 + 190214555 182100647 182100646 182100710 64 ACACATATATACACATATATACACATATATATACACACATATATATACACACATATATATACAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x...:.x.........:..:.:x.::.x.:....x.....:::.......:.. 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 164579898 25634657 +3141 chr4 + 190214555 182100669 182100668 182100719 51 ACATATATATACACACATATATATACACACATATATATACACACATATATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ......:........x.:..:...:......:...:....x....x..x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 153630302 36584253 +3455 chr4 + 190214555 182100673 182100672 182100786 114 ATATATACACACATATATATACACACATATATATACACACATATATATACACACATATATACACATATATATACACACATATATATACACATA-TATATACACATATATATACAC chr4 - 94230402 4417343 4417342 4417457 89812946 89812945 89813060 115 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATATAAAC ..x..x...:.:...:.:.:.......x:x.:....:..::x:x:.x.:....::...xx.x:...x..x...:........x...x:.:..:-:.:.x....xx.:.....x.. 93M1I21M 73/114 64.0% 115/94230402 0.0% 1/114 0.9% 177683330 12531225 +3066 chr4 + 190214555 182100680 182100679 182100737 58 CACACATATATATACACACATATATATACACACATATATATACACACATATATACACA chr4 - 94230402 7596412 7596411 7596469 86633934 86633933 86633991 58 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA ..:...x..::.....x.::......:....:...:....:.x...:...:x...:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 174504268 15710287 +3141 chr4 + 190214555 182100683 182100682 182100733 51 ACATATATATACACACATATATATACACACATATATATACACACATATATA chr4 - 94230402 28470367 28470366 28470417 65759986 65759985 65760036 51 ACATATGTATACACAGACATGTATGCACACACATACATACTCACAAATCTA ......:........x.:..:...:......:...:....x....x..x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 153630316 36584239 +3066 chr4 + 190214555 182100694 182100693 182100751 58 CACACATATATATACACACATATATATACACACATATATACACATATATATACACACA chr4 - 94230402 7596412 7596411 7596469 86633934 86633933 86633991 58 CATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCA ..:...x..::.....x.::......:....:...:......x.:.....:x:..:.. 58M 42/58 72.4% 58/94230402 0.0% 0/58 0.0% 174504282 15710273 +3175 chr4 + 190214555 182100697 182100696 182100760 64 ACATATATATACACACATATATATACACACATATATACACATATATATACACACATATATATAC chr4 - 94230402 17520749 17520748 17520812 76709591 76709590 76709654 64 ACAGATATATAAACACAGATACACATACATGTGAATGCTTGTATAAACACATGCATATATATAC ...x.......x.....x...:.:.:...::.:x..:.x::....x.:...::........... 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 164579948 25634607 +3303 chr4 + 190214555 182100730 182100729 182100867 138 TATACACATATATATACACACAT-ATATATACACATATATATACACATATATATACACATATATATA--------CACATATATATACACATATATATACACATATATATATATATATACTCATATATATATATATACTCATATATA chr4 - 94230402 4417317 4417316 4417454 89812949 89812948 89813086 138 TACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGC---------CACAAACACTAACATATA ..:.::.x.:.x:...x.x..x.-.x..x..x.........:.....:.:.:.x:x.....:::..:--------.....:...xx.x:...x..x...:...:....x...x.....:.---------:.:.x.:...x.:..... 23M1I43M8I45M9D18M 87/129 67.4% 138/94230402 0.0% 18/129 14.0% 177683413 12531142 +3436 chr4 + 190214555 182101261 182101260 182101365 105 AAGAAGGAAGGAAGGAAAGAAGGGAGGGAGGAAGGAAGGAGGGAGGGAAAGAAGGAAAGAATGGA--GGGAGGAAGGAAAAAAGGAAGGAAGAAAGGGAGGGAGGGA chr4 - 94230402 12888306 12888305 12888410 81341993 81341992 81342097 105 AAAAAATAAGGAAGGAAAGAAGGGATTGAGGAAGGGAGGGGACAGGTAGAGGTGTCTTGAAGAGATTGGTAAATAGGCAGAAATGCAGAAGTAAA--GAGGGTGGGA ..:..:x..................xx........:...:.:x...x.:..:x.xxxx...x:..--..x.::x...x.:...x.x..:.:x...--.....x.... 65M2I28M2D10M 72/103 69.9% 105/94230402 0.0% 4/103 3.9% 169212955 21001600 +3598 chr4 + 190214555 182121056 182121055 182121145 90 TGGCATGATCTTGGCTCACTGCAACCTCCGCCCTCCGGGTTCAAGTGATTACCCTGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGC chr4 - 94230402 18197114 18197113 18197197 76033206 76033205 76033289 84 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......x..x..------..:..:..:xx:x.:..:...........x..xx.xx..........::.:.........:.:....x.:.. 12M6D72M 61/84 72.6% 84/94230402 0.0% 6/84 7.1% 163923942 26290613 +3026 chr4 + 190214555 182123139 182123138 182123188 50 TGGCTGTTTTGTTGTTATTGTTGTTGTTGTTGTTTGTTTTTTGTTTGTTT chr4 - 94230402 17488388 17488387 17488437 76741966 76741965 76742015 50 TGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTT ..x:.....x.:.x..x..............:...x..x........... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 164634751 25579804 +32217 chr4 + 190214555 182127200 182127199 182127662 463 AGGGTTAATATTATATGTAAGGCAGA-CATCTAATGGATAAATTTAAAAGCAGCTAAAAACATAGCATCCTGTGTATAACTTTCATAATTGTACGTTCCTCCAGAGATAATGGATATGATTATCAGCAGCGCCTGTCCTAGGTAACTTGGCAAGGTTACGATTGTTTGTTACAGCTTTGGTTATATTAACATACACATTAATATTTATAAATATTTGATGTCATGTTAATTTTTCATATAAGATGATTTATGTAATGTTGCTGTGCCCTGTTAGAGGGCATTTGCAATATGCTTCAAAAGGGAACTGAACTGATGCATGTTCTTTAAGGGAACTTGCCTGTATATCACTGTTCTCATGATGCATTATTCTGAACAATAGT-ATTTCAAAATAAATTATGTGAATTGTGGATTTACTCCATTAACATTTTAAATAAAACATAAAGGAAAAGATCATGCTGAAACTA chr4 - 94230402 52345170 52345169 52345632 41884771 41884770 41885233 463 AAGGTTAACATCCAATGTGAGGTGGAGTGTTTAATGGATGAACTTAAAAGCAGATAACAATACAGCATCCCATGTATA-CTTTCGTAATTGTGCGTTCCTCCAGAGATAATGGATATCATTATCAGCGGCGCCTGTCCTAAGAAACTTGGCAAGGTTATGATTGTTTGTTACAGCTTTGGTTATATTAACATACACATTAATATTTATAAATATTTGATGTCATGTTAATTTTTCATATAAGATGATTTATGTAATGCTGCTGTGCCCTGTTAGAGGGCATTTGCAGTGTGCTTCAGAAGGAAGCGGAATTGATGCATGTTCTTTAAGAGGACTTGCCTGCGTATTACAGTGCTAACAGTGCATTATTCTGGAGAATAGCGATTTAAAGATGAATTATCTGAATTGCAGATACACTCCATTAACATTTTAAATAAAACATAAA-GAAAAGACCACAGCAAAAATA .:......:..:xx....:...::..-::.:........:..:..........x...x..:.:.......::......-.....:.......:........................x.........:............:.x...............:..................................................................................................:............................:.:.......:....:.:.x...:..................:.:.........::...:..x..x..x.:::............:.x.....:-....x..:..:......x.......::...x:..............................-.......:..::x::...x.. 26M1I51M1D301M1I62M1D21M 398/461 86.3% 463/94230402 0.0% 4/461 0.9% 129782030 60432525 +5865 chr4 + 190214555 182131666 182131665 182132036 371 TCACAAGAATGAAATGTAACAGAATACACAAGG-GGTCAATAAGGATGTGTATTTTTCCTTCCACTGTGATCTACTGCTATTCAGAACAATTGATTAGACAGGTTCATTATTGTTTTGCAACCACACATAAACCATTATTA-TCTGCCATTCACTCCCTAAGGTGTTCTAGTGGACAGTTTTTCAATGATTTGTAATTTCAAATAGCAGCAAACTTACAATTCACCTTGTTTAACTTCCCTGGTCTTTCAAAGAGGATTACCAACTTCTACAA--GCTAAACATTGGAGCAGTTACAGCCT----TCCTGGAAATTTTTTATCAGGCTGGCAAATGTTTATCATCCCTGAACTATACTCAGTCCTTAAAACAGTGATTT chr4 - 94230402 52349816 52349815 52350160 41880243 41880242 41880587 345 TCAGGAGAATAAAAAATAATAGAACAGAAACGGAGGTCAAT---GATTCACATTTT-----CTACAATCAGCTGCTAGTGTTTTGAGCAATTGGTTAGACTCGTTTATTCTTGTTTTACAACCTCGTAAGCACTGTTGTTATTTTTCCTTTTGTTCACCTGGCTGTTCCTCCAGACACTTTCCCAATGAT---------------ACAGAAGATGTTTCTTTTTATTTTCTAATTTTTACTGATTGTAGAAAGAGACCGAGGAGCGT-TGCAAGTGTCAGCCATGTGAGTA--TACAGCATGTTCTCCTGGAAG-CTTATGTCAAACTAGTAAGAGTGCATC-------AGTTACATCAGGTCTTTGAAACAGTAATTT ...x:.....:...x:...:....:.x.x.x..-.......---...x:::.....-----.:..x:.x.x..:..:x.:..:x..:......:......xx...:...x.......:.....x.::.x:x..::..:...-.:.x..x..:::..x.:x:.x.....:xx::....x...::.......---------------:...x.:.:x.x:xx..:xx:..x:.x.x:..:x...:.:x.xx......:x:x.xx.:.x.-.:...--.::.:x...xx...:.--......x.----........:-:..x.:...::..:.:..:x..x:...-------.::..:.::x:...:..:.......:.... 33M1I7M3D12M5D80M1I48M15D62M1D5M2I16M2D8M4I9M1D27M7D30M 213/337 63.2% 345/94230402 0.0% 42/337 12.5% 129781850 60432705 +69900 chr4 + 190214555 182137028 182137027 182138684 1657 ATTCTTGTGCTTCTCCAATTTTACTGGATATGATGTTTTTATTGGGGTTCATGGAAGCATGGCTAATGACATCAG--------------CAAGCTTTGTAATTTCTCACTGCCAGTTTTCTACACAACTTACACTTTTGTCACTCAAACTGCACCAAATTGCTCCAACAATTAATCTTAAAGCGCAGGAGTAGGGGGACTTTTAAATGGACCCCTTCTTGGGATTTTGTGTTAAAAACAGGAAAGTTCCCATGAGTGAAGGGGATAAGTTAGCTTTTCCAGCCTCTGCCTCTCCCCAAGTCTCACTCTTCTCTGCCACCTCCCCCCCCCCAAAAAGGAATGAATTACATTTCTCTTCTTGTCCTTTAAATGAATAGCATAGTTTGGGTGAAATTATCAGGCAATTGCATGCCTTTTATGCAGATAATGCTATTTGATGAAAGCGGTGTTTTGATCTGCTAAGGATAATACAGATCCAGGGTTGGATTCATTGGTGAGAGTAAAGCTGTCTTCTGTGATAACTTCATCTCAGCATGAGGTCAGACGGGGAAAACTGGGATGGGGGATTAAAAAATGACACAGTCGGAGCAGTATTCAGTTCCCTGCTGTGCTCCTGGCTGCACACTATAGCTTATGTTTCTGATCTGTTATGGTATTGTCTGCCTTTCTCTCTCGGAGCAGAAAGAGATTGCTTAAAACTTTTCTTTTTTCAGCTAGAGGGATTAGTTCTGTGCAGCTTTTTTAATTAAAGAAACTGTATCTTTTTCAAGGCAATTTAAAGCTGCAAGGGAAGACCCATCAACATCCATAACTTAGTACTATTATCTGTAACAAAGTC-------------TAAGCTCTAAATTTGATATTCAGAAATAGGGGAAAGGAGCTATAGAATTCTGTTGTATTCTTAACCTTCAGTGGTTGCTCAAATCCCTAAATGAAGAATAGTAAATAAATTATTTTGTGTAAGTCCTGAATATGTTTCTATAAGTAGTAACTTTCAGCCTCTTTGCTTTTTAGCCTAGCTGAGCTTGCTTAATTAA-ATCTTCATGATGATAGCGAAGTGCACTTGCAAATGGT---GTAAGAGGAAATAGATTTGACTATATATCCTTTTCTTTACCCAGAGATCATTTTTAAACATTTCCATTCTACTGAAAGTGATAACAGTAGAAAAGGTCTGCTTAATATGGGCAATTT----------GCATTTA--------------AACAGTGCAAAGTACAACATTATGGTACTT--------------TATCACGACGAATCTTTGCATGT----GTGATA------AGCGGTCATCATCTTTATTAATCTGAGGGAAGCATGGATTGAATCTATCCA---AAGTGATGATGAATTTGTCAGGAC--------------------------------------------------ATATACATTT------------GAGTTGAATTTATAGCTCAATTTAACCCAGGTTAATGTCGAAAATCCTCAAATGTTTCAAATAAGGCCCATATGGTTATCACTTTACAAAGCACACAGGCTCTGCGCTTCAGTTGCAACATACACATCTCCAACTAAATTCCATGCCAGATCAATTAGAAACAGTCCTCCTGAGCAGACAGGAACAAACAAAGATTGTTTCCCCAATACCAGCTGAACCCTTGTCTTGAAGAAATGAAAAGCAGTCATCTTAGGCTCTACACTTCTTACCACTAAAAATCCAAAGGGAATTTGGAGGACGACAGGGTTTTATAAATAATGTCATATTTAATAT chr4 - 94230402 52357198 52357197 52358871 41871532 41871531 41873205 1674 ATTCTTAGGCTTCTACAATTATGCCATATATGATTTGATTATTGGGGTTGGCGGAACCATGGCTAATGGAATCAGTATCATGGCTACAGCAAGCTTTGTGCATTCTCACTGCCAGTTTTCTGCATAACT-ACACTTATGTCACTCAAGCTGCACAGGGGTACTCTAACAATTAATTGTAAACCA-------GGGGGAAACTTTTAATGGACCTCTTCTTGAGATCTTGTGTTAAAAAAAGAAAAGTTCCCATGAGTGAAGT--ATAAGTTAGCTTTTCCAG-------------------------------GGGGA-------------AAAAAGGAATGAATTACATTTCTCTTCTTGTCCTTTAAATGAATAGCGTAGTTTGGGTGAAATTATCGGGCAATTGCATGCCTTTTATGCAGATAATGCTATTTGATGAAAGCGGTGTTTTGATCTGCTGAGGATAATACAGATCCAGGGTTGGATTCATTGGTGAGAGTAAAGCTGTCTTCTGTGATAACTTCATCTCAGCATGAGGTCAGACGGGGAAAACTGGGATGGGGGATTAAAAAATGACACAGTCGGAGCAGTATTCAGTTCCCTGCTGTGCTCCTGGCTGCACACTATAGCTTATGTTTCTGATCTGTTATGGTATTGTCTGCTTTTCTCTCCCAGAGCAGAAAGAGATTGCTTAAAACTTTTCTTTTTTCAGCTAGAGGGATTAGTTCGGTGCAGCTTTTTTAATTAAAGAAACTGTATCTTTTGCGGTGTAATTTAAGGCTGTACAAGAAGG-CCATCAGCATTCATAACTTAGCGCTGTTACCTGCCACAAAGCCGAGCCGTTCCTTTTGCGCTCTGTGCGAGACATCACCAGCCAGGGTTTGGAGGGTTAAAAATT------GATCGTTGGCCCT--GCGATTG---------------GAAGAAT--CCAGTTGGCCGTTAT------------------CTCCCAAAAGT------TTTCAGGCAGCTTTGCCGTTAGTTTATCAGGGCTTTCTTAAAAAACATCTCTGTGACATCAGGAAAGGGGA-GAAAAAATAGTCTGCTATGTGAAAATAGACCTGA--GCGTGTTCTCTCCTCTA---AGAAATA-----TAAAAATGTCCTCAAGTATAAAAGTGGCAACTATTGGAAAGGTCTCTGAGAAACAAGCAACTTCTTTAGATCCACGTTTAGTTTTGTTCTAATGATTATCCAAAAATATAAC----TGGTACCTTCATTAACTGGGAGTAGTGCGTTAATAATTTGCAGGTGTTCGTGATACATAGCAATGGTCAGAGTGCGTTTGCATCT---Gtagacatagac---atttgtgcatatatgtgtatatacatatgtctggacgcatctctatacagatgcatatatgaatacacacacacacacacttatatatatatatTTTTTCAGCTCCAAGAGTTGAATTTACAGCTCCATTTATCCAAGATTAATGGCTAAAACCTTCAAATGTTTCAAATAAGGCCCATATGGTGATCACTTTACAAAGCATACAGGGACTGTGCTTAGGTTGCAACATACACATTTCCAACTAAATTCCATGCCAGATCAATTAGAAACAGTTCTCCTGAGCAGACAGGAACAAACACAGATTGTTACCACTATACTGCCTGAACTCTTATCTTCCAGGAATG-AAAGCACTCATCTTGAATACGGCGTATTTTACTTGCAACAGTCT-AAGGAATTTTTAAAAGCAATAATAATATTTTAATGAAGTCTCAGTTTAGAT ......:x......x.....x.:.::x.......x.xx...........x::....x...........:x.....--------------..........:xx...................:..:....-......x..........:......x:::x.:...:..........:x....x.:-------:....:.x:...x........:.......:...:............x..:...................x--..................-------------------------------x.xx.-------------...............................................:...................:.............................................................:..........................................................................................................................................................................................................:........:.:......................................................x...................................x.::x.:.......:....:.x::....:-......:...:..........::..:...:...:x......:.-------------.:x.....:x::xx..:..:xxx.:x:....xxx:.::.x.xx.:....------x..:x..::..:.--.:.:...---------------.......--:x.:.x:::::..x.------------------:.:.:.x....------......x.xx:..xx::x....::..x.x.:....x.....xx..-....:::...::x:..x:...x.x.-xx:x....:..---x..x.x.:.......::...--:::.:.:..:.:..:..---...:..x-----....x..x...x:xxxxx.:......::...x:.x.:........x:xx:.x.:::....:..----------:.:....--------------.x:.x:xx...:..:...----......:.--------------..x::..x::.xxx......x..----......------.::.....xx:.x:x.x.xx....---.x.::...:..:---..:.:.x..---.x...xxx..:x..x....x....--------------------------------------------------.....:....------------............:.....x.....x..x..:......x.x....:.:.............................x................:.....xx...:....x:................:.....................................:........................x........x..x.x....::x......:...:....xx..:....-......x.......::::x.x:.::x.:....:xx:..x.:..:-....:.x...x:.:::.:.:.:x:x.x.x.x...:.x...x:.x..x.x.. 75M14I40M1D54M7D70M2D18M31D5M13D463M1D43M13I49M6D13M2D7M15D7M2D15M18D11M6D45M1I25M1D11M3I20M2D17M3D7M5D63M10I7M14I18M4D8M14I23M4I6M6I24M3D12M3D9M3I24M50I10M12I236M1D44M1D51M 1210/1530 79.1% 1674/94230402 0.0% 271/1530 17.7% 129779830 60434725 +13096 chr4 + 190214555 182139636 182139635 182140074 439 TGGAATAATGTAGCAAGTTTTAAATACGTTCACAGAGCTAAACCAAAACCGAAAGTTC---------------CACATGTTAAAAGACGCT--GGTGTTCAAAATCCTTCGCAAAACCT---GGGGTCTTTTATGAGGCTCTAGCCAAAGCAAGGGAGCCCCTGGGTGGTGCTACGCAAATGCA---TTTCCACCGAAGGTCGGAGCCACGCGTAAGGCCCGGTTT-ACACCATGGAATACAAACGAATGTACTGGAGAAGCATGGTCCCAATT-AAAGGTTGCTTCGTCTCATCACCAGTCCATTCAGTGGCTCCAAAATGCATGCACATTGAGAGAGGCTTATCTTGCTTTAATTAAGATAATGAAAGCATGTTTTCCTCTACAAACAGTCATTGAATTTTATGACTTTGTCAGTGATCGAATTAAAATATTTGTTTTATAGTTC--CCTCAATCTAA-----CAGCCA chr4 - 94230402 52359534 52359533 52359987 41870416 41870415 41870869 454 TGAAATGACGTGCTGGGTTTTAAGGCCGT-----GAGTTTAGCTCAGCCCGTAGATCCTAATGCAGTCCTAAGCACATAG-GAAAGCCATTTCGGTACTCCACATCACATGCAGACTCCTTCAGGTTCTTTTGTAGG-----AGCCCAGTGAAGAGGGTCAGCAGTCGGTGCGGCTCAAGTGCGGCGTTTTCACCAAGGGTC--AGCCTCGCAGATAGCTTTGTTTTATGCAGTGGAACACAAACTAATGTAGTGGAAAAGCCTGACCCCCATTTAAAGGTTGATTTGTATGATAATCAGTACATTTAGTGGCTTCAAAATGAATGTGTGT----AAGGCCCTATCTTGCTTTAATTAAGGTAATTAAGACATATTTCCCTCTGCAGACAGCTATTTAATTTTATGGCTTCGTCAGTGATCAGATTCGAGTGTTTGTTCTACGATTTTACCACAATCCAGTGCTCCAGCCA ..:...:.:..:x:::.......:xx...-----...:.x.:.:x.:x...x.::.:.---------------.....:x-:....x.::.--...::..x.x...x:x:...:.x:.:---:..x......:.::.-----....x.:xx...:.:.:.xx::.x:.....x:.x...:...:---...:....:.:....--....x...:x.x:..::x....-.::.x:.....:......x......x....:....x..::...x...-........x..:..x.x..x.:....x....:.......:.......x...::::.----.::.x.:..................:....x..::...:...:.....:..:....::...x.........:...:..........::...x:.:.:......:..:::..:--..x.....:.:-----...... 29M5D24M15I7M1D10M2I26M3I15M5D42M3I15M2D22M1I47M1I56M4D112M2I11M5I6M 291/422 69.0% 454/94230402 0.0% 49/422 11.6% 129780102 60434453 +22724 chr4 + 190214555 182148054 182148053 182148352 299 ACTAATTGTTGTGTCTTATAAAACCTGATTTATTTTATACTTTTTT-ATACCAAGCATGACCATTATGAAGCTCTCCTTCTAATTGAGATTAATGTTTCTGAGCAAAGAAGTGGTTTGGAGGGCTGCGTTCATTTTGAGTGCTGTTGTAATCAATTTTAGATACAGCATTCCACAATGGATCAGTTTGCATCCAAACCTGCCTTATTATGTAGAATTAACTTGTTGGTGATTGATAGTGATACTTCTCCATCTTGAAAAGTCATTTGTTTCCAAACGAGTGTGATGGCTTGTATGAGTTT chr4 - 94230402 52365171 52365170 52365470 41864933 41864932 41865232 300 ATTAATTGCTGTGTCTTATAAAACCTGATTTATTTGATACTTTTTTCATACCAAGCATTACCATTATGAAGCTCTCCTTATAATTGAGATTAATGTTTCTGAGCAAAGAAGTGGTTTGGAGGGCTGCATTCATTTTGAGTGCTGTTCTAATCAATTTCAGATAGAGCATTTCACAATGTATCAGTCTGCATCCAAACCTGCCTTATTATGTAGAATTAACTTGTTAGTGATTGATAGCAAGCCTGCTCCATCTTGAGGAGTGATTTGTTTCAAAACAAGTGTTATGGCCTCCAGCAGTTT .:......:..........................x..........-...........x....................x...............................................:..................x..........:.....x......:.......x......:.......................................:...........::.xx..x...........::...x.........x....:.....x.....:.x:.xx..... 46M1I253M 270/299 90.3% 300/94230402 0.0% 1/299 0.3% 129782883 60431672 +3783 chr4 + 190214555 182161602 182161601 182161673 72 TATATATATATGTATATATATATACAAATATATATATGTATATATATATATACACACACACAAATATATATA chr4 - 94230402 37363042 37363041 37363112 56867291 56867290 56867361 71 TGTACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACAC-AATATGTATA .:..:...:x........:..::..........xx:.......:.:...:..:x.......-.....:.... 61M1D10M 55/71 77.5% 71/94230402 0.0% 1/71 1.4% 144798560 45415995 +3046 chr4 + 190214555 182161608 182161607 182161726 119 TATATGTATATATATATACAAATATATATATGTATATATATATATACACACACACAAATATATATATGTATATATATACACAAATATATATGTATATATATACATATATATGTGTATAT chr4 - 94230402 4417317 4417316 4417434 89812969 89812968 89813086 118 TACATGCCTGTTCATA-AAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT ..:...:x.:.x:...-.x..x.xx.x..x.:x.:.......:.:.........x:..:...:::...x:x:.x.::...::x..xx.x:::.x..x.......:....x.:.x..... 16M1D102M 73/118 61.9% 118/94230402 0.0% 1/118 0.8% 177744291 12470264 +3627 chr4 + 190214555 182161637 182161636 182161744 108 ATGTATATATATATATACACACACACAAATATATATATGTATATATATACACAAATATATATGTATATATATACATATATATGTGTATATAT---ATATACACAAATATAT chr4 - 94230402 4417343 4417342 4417453 89812950 89812949 89813060 111 ATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATATGCCACAAACACTAACATAT ..x..x.:.......:............:x.:...::::.:x:x:.x.:....x:...xx.x.:..x..x...:.:.:....x.:.x.....---.:.x....x..:.... 92M3I16M 72/108 66.7% 111/94230402 0.0% 3/108 2.8% 177744294 12470261 +3238 chr4 + 190214555 182161670 182161669 182161780 111 TATATGTATATATATACACAAATATATATGTATATATATACATATATATGTGTATATATATATACACAAA----TATATGTGTATATATATACATATATATGTGTATATATATAT chr4 - 94230402 21704674 21704673 21704788 72525615 72525614 72525729 115 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .....:...:..:.:.....x.:.:.:.:..:....x.xxxxx...x.....x..:xx.:xxxx..x:..----....::..x.....x.x.:..........:...:...:x.. 70M4I41M 73/111 65.8% 115/94230402 0.0% 4/111 3.6% 160456996 29757559 +3238 chr4 + 190214555 182161670 182161669 182161780 111 TATATGTATATATATACACAAATATATATGTATATATATACATATATATGTGTATATATATATACACAAA----TATATGTGTATATATATACATATATATGTGTATATATATAT chr4 - 94230402 21701101 21701100 21701215 72529188 72529187 72529302 115 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATAGATGTGAATGACTGGCACCAAGAAACTTTATACATGAATATAAAAATATATATATGTATATGTATGAAT .....:...:..:.:.....x.:.:.:.:..:....x.xxxxx...x.....x..:xx.:xxxx..x:..----....::..x.....x.x.:..........:...:...:x.. 70M4I41M 73/111 65.8% 115/94230402 0.0% 4/111 3.6% 160460569 29753986 +3081 chr4 + 190214555 182161714 182161713 182161771 58 TATATGTGTATATATATATACACAAATATATGTGTATATATATACATATATATGTGTA chr4 - 94230402 52487166 52487165 52487223 41743180 41743179 41743237 58 TAAATGCACATATATATAAATACAGATGTATGTGTATATAAATTAAAATACATGTGCA ..x...:::.........x.:...:..:............x..xx.x...:.....:. 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 129674548 60540007 +3024 chr4 + 190214555 182161743 182161742 182161825 83 ATGTGTATATATATACATATATATGTGTATATATATATACACAAATATATGTATATATATACACATATATATGTATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ......:...:.:.:....x.:....:.x..:....:..::.xx.:..xx:..:.:.:.:.....:.:.x.:::.x..:x... 83M 52/83 62.7% 83/94230402 0.0% 0/83 0.0% 173765955 16448600 +3897 chr4 + 190214555 182161792 182161791 182161899 108 TGTATATATATACACATATATATGTATATATATACACATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTATATATATACACACATATATGTGTA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ...::..::...:x....:.:..:..:.:.x.x:..::x:..:..::.....x:.....:.:.....:..x...:....:x:..:::x:.:.x.x...:.:....:.. 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% 109040690 81173865 +3590 chr4 + 190214555 182161829 182161828 182161899 71 ATATATATGTGTATATATACACAAATATATATGTGTATATATGTGTATATATATACACACATATATGTGTA chr4 - 94230402 37363045 37363044 37363112 56867291 56867290 56867358 68 ACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA---ATATGTATA .:...:x...:....:..:...........xx........:...:.:...x:.:.....---......:.. 59M3D9M 53/68 77.9% 68/94230402 0.0% 3/68 4.4% 144798784 45415771 +3046 chr4 + 190214555 182161852 182161851 182161913 62 AATATATATGTGTATATATGTGTATATATATACACACATATATGTGTATATATACACACACA chr4 - 94230402 38535894 38535893 38535955 55694448 55694447 55694509 62 AATATATACACACGTACATGAGAATACACATACACACATGTGTATGTATGCATACAAGAACA ........::::::..:...x.x...:.:..........:.:.:.....::.....x:x... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 143625958 46588597 +3363 chr4 + 190214555 182161880 182161879 182161984 105 TATACACACATATATGTGTATATATA-------CACACACATGTATGTGTATATATATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATAT chr4 - 94230402 40224604 40224603 40224715 54005688 54005687 54005799 112 TAAACACACAAACTAGCACATGTATAAAGCTAATACTTATACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGT ..x.......x.:xx.:::..:....-------:..x:.:.::.....:xx.x.x.:.:..xxx:x.:.x....x...............:........x...:....:.:. 26M7I79M 70/105 66.7% 112/94230402 0.0% 7/105 6.7% 141937276 48277279 +3523 chr4 + 190214555 182161909 182161908 182162002 94 ACACATGTATGTGTATATATATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGATGCA chr4 - 94230402 64944124 64944123 64944217 29286186 29286185 29286279 94 ACATAGATACGTATAAATAGATACAGATATGTATATATCTGTGAGATTGTATCTTTTTATCTGTATATGCCTCTGCGTGTATGTATATGATATA ...:.x:..:..:..x...x.....x....:.....x.x....x.xx...:.x.x.x...x.:.....::x.x.:::.:...:........::. 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 117217785 72996770 +3015 chr4 + 190214555 182161929 182161928 182161988 60 ATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 - 94230402 1888773 1888772 1888832 92341571 92341570 92341630 60 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATAT ...:......:..:.x.x...:x.x.....::.......:....:x..x.:.:....... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 180273156 9941399 +3015 chr4 + 190214555 182161929 182161928 182161988 60 ATACACATATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT chr4 - 94230402 1885632 1885631 1885691 92344712 92344711 92344771 60 ATATACATATGTACAGTAGTGCCTCTGTGTACATATATACATATGGATTTGTGTATATAT ...:......:..:.x.x...:x.x.....::.......:....:x..x.:.:....... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 180276297 9938258 +3111 chr4 + 190214555 182161936 182161935 182161995 60 TATATATATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA chr4 - 94230402 35554958 35554957 35555017 58675386 58675385 58675445 60 TAAATATATTTGAGTGTGTGTGCACATATGAGTGTATATATATGCATACAAAGATGTGTA ..x.........x.........:::....:x:.:.........::...:.x.x..:.:.. 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 146606978 43607577 +3570 chr4 + 190214555 182161942 182161941 182162027 86 TATTTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATGATGCAAACATACATCCACTAATGTATTAGT chr4 - 94230402 36878605 36878604 36878689 57351714 57351713 57351798 85 TATTTGTGTGTCTATGTGTAAAAGTATGTGCATATTTGTAAACGTATATATCTGTGATGCACGTAT-TGTTCAGTAATGAATTTGT ...........x.:......x.x:...:.::....x.:..x.::.......x.:.......x::..-::.:..x.....x...x.. 66M1D19M 61/85 71.8% 85/94230402 0.0% 1/85 1.2% 145283337 44931218 +19830 chr4 + 190214555 182169520 182169519 182169989 470 ATCTTATATTTATTATCAGAAAGTGCTGTGAA--TTTAAAATCTTTCTTTTGCCCAAGTCAAACAGAATTTCCAGTAATAATGAGAAACGTGTGACTCTTGACCATTTTGTTTACCAAATAATGTAGTGTGAGATATCTCTACTACAGTAATAACTTCCGGTGTAATTTACATTGGCGTTTGTTAACAGCAAAAGACCTCTCCTGTGGGGGTTAAGAATATTTAATCCTTTAAAGCTGACATATATAACATGTAGCTATGTCAGCTACAGCTGTTTCTAAACATCAGTAACAAAATTATAGACAGGTTTTGAAGCTTCTGTGGTGGGAATGAATACATCTGAGGATTCAACTTGCTGACAGTGTTTTTGTAATTTAATCTTACCATCTGGTAGAAAGTAAACATTTTTTATAAAATTAAAGTTTATAA-AGTGAATCGCTTATAGTTTCCGATTGTTGTGAATGA--CAAATTTA chr4 - 94230402 52380586 52380585 52381038 41849365 41849364 41849817 453 ATGTTGTATTTA-------AAAATGCCTCTAAGTTTTAAAATCCCGCCTTTCCCTG-------CTATTTATCCAGAGAAAA-GCCAAATGCGGCACCCTTGACTTCTTTGTTTATCAATGAACTAA---TAAGACATCTTTATT---GTGAAAAGTCTCTGACTATCTTACGCTATGTCTGGCTAACAGAGCAGGTTTATTCCACCGGGGGTTAAGAATATTTAATCCTTTAACGCTGACATACACAACACATCGCCATGTCAGCTACAGCTGTTTCCAAACATCAGTAACAAAATTATAGAT-GGTTTTGAAGCTTCTGCGGTAGAAATGAATACATTTGAGGATTCAACTTGCTGACAGTGTTTATGTAATTTAATCTTGCCATCTGGTAGAAAGTAAACATTTTTTAGGAAATTCAAGTTAAAGGTAGCAAGCCCCTTGTGGTTTCTGGCTGCTGCAAATAGCCCAAGTTTA ..x..:......-------...:...:x:x..--.........::x.:...x..::-------.x:xx.x.....x:.x..-.xx...:.:.xx..:......:x:........:...xx..:xx.---.:...:....:..:.---..:.x..x.::.x.xx..x:....::.:xxx:.x.:......x:x.:.x::x:...xx:...........................x.........:.:....::.x..:....................:........................:-................:...:.:...........:...........................x..............:............................x:.....x.....x.x::-..::.::.x...:.:.....:.::..:..::...::--...:.... 12M7D13M2I22M7D18M1D44M3D15M3D156M1D124M1I36M2I8M 337/448 75.2% 453/94230402 0.0% 27/448 6.0% 129788934 60425621 +14658 chr4 + 190214555 182170451 182170450 182170890 440 TTGGTTTACAAACCCTGCCAAATTCAAACTTTATAAATCTGATCTACGCCTTTTACTTGAAATAAATATACACGCTGATAGACTCTTG--TGTTTATAGTTGTGCCCTGTGTTAAATTGAAAGCCTACACTCTATGATGATGTAATAAAATTTAATTAGTTGTAAGTCAGGTTTTG-GTTAATGGTAATTAGTTTAGTGTATAATTATTACATCTAATAGCAATCTGAAGTCTGCAAGCATTTTGATCTTTTTCCAAG--TAAAAAGAAAAAAAACCACAAAG--CTCCTGTAAGATTTATAGCAGAAATTGCAATAATAAAATCACATTAGCTAATTTCATTAGATAAATCACAGAAAATGTTAAGTGGCA-AAGTAAAAT-TTCAGTGATGATGTACATGTGTTATGTTGAGCTGGTACATAAAATATTTTTAAGTG-----AGTTTTTTTT chr4 - 94230402 52382805 52382804 52383252 41847151 41847150 41847598 448 TTGGTGACCAAATCATGGCCCATTCCAGCTCCATCAGCATGACCTGGGCATTTGGCTTGTAATAAGGCCACAGGCTGGTGAGTTCCTAAATGTTTATAGCTGTGCCCTCTGTTAAAT----AGACTACGCTTTACTTTCATGCAGTAAAATTTAATTAATTGTAAGTCAGCTTTTGCTTTAGTTGTAATTAGTTTAGCATATAATTATCATGTCTAATAGCAATTTGAAATCTTCATGCATCTTGATCTCATTCCATGTTTTAAAAAAACAACAACCAAGATGTCCACCTCTTAGATGCATTCAATCAGTAGCTATAATACAGTCTTATTGGTCAATTGTATTAA--AGACTGTATAAATCTTTAAGTGACAGAAGTGATGCATTCACTTGTGGTTGATTTGTGTTACATTAAGAAGATACAGAAAAATGTTTTACATGGAACTAGTTTTTCTT .....xxx....:.x..x.xx....x.:..::..x.::x...:..:x..x...x:....x.....:xx:...x....:.::::..:.:--.........:........x........----..x....:..:..:xx.x...:.:.............:...........x.....-x...:.x.............::.........:.::............:....:...x..x....:.......:x.....x.--.x....:..x..x.....x:.x.--.x...x.x....x:..xxx.xx.:.x..x......x.:..x:...:.::....x:....:--.:.::::.x...x:x.......:..-....:.x::-....x.x:..:.xx.:x.......::..:..xx.:....x....xxx.....x:..-----.......:.. 88M2I27M4D55M1I81M2I23M2I60M2D25M1I9M1I56M5I10M 305/434 70.3% 448/94230402 0.0% 20/434 4.6% 129787646 60426909 +14399 chr4 + 190214555 182179015 182179014 182179462 448 AAGTATTTGCTGACTGAAGAACAGTATAGTGCCTTTAAGGTGAGAATTTTTGTATTAAATAACTAAAA-TAAACCGT---AAAAATTGCTGAGCAAAACATATCTAAA---TCTTGTATTTAAATTAGATTTCATTTCAAAATGCTTTTAAGGACC----------------CCTTTTATTTATTCCCCTGGTGGTCTTTCAAAAGCCAGGTGTCTGGGATTGTCTCCAGCCTGCTCTAAAAGCACCCCAGGCTTTGGATTAGTACAAGAGAGCAGCTGCCTTTTATTCAGCAGTGCCCATTTACATAATGCCTGTTCATTTAAACTCACTTGGAACCTATGGCCAGGATGAACCCACACCAGAGTGAGTCAGCAGTGCATGGT--CTTGTTTTTGC-------------------------ATTGAATTAATTTTAAAACATCCCTCTCTTCCACAGCTGGAATGAAAGACAGTACTGTAGAGGCATTTCTCGATTC chr4 - 94230402 52386961 52386960 52387434 41842969 41842968 41843442 474 AAGCATTTTCTGTCTCTAGGATAGAAAAGTATATTTCAGG-------------ATCTGATAACAAAAAATCAACTTTTTTCAAGGTTGCTGACCCTGACACTTTCAGACCGTCTTGAATTTAGTTAAAACTTCATTTCAGGCTGCTTTTATAGACCTTCCCTCCCCCCATTCCCCCTTGCATATTCCCTCGGTGGTCTTTCAAAAGCCAGGTGTCTGGGATTGTCTCCAGCCTCCTCTGAAAGCACCCCAGGCCTTGGATTAATATGTGAG---AGCTGCCTTTTATTTCAGTCTCTCAATTTACATAATGCCTGTTCATTCGAACTCACTTTGAATGTACAGCCAAGTTGAGCCAGAACCTTTTCAGGGCATTAGTTCATAGTACCGTGTTGTTGCtttttttttaattattattatttttaCTGAATTTAACTTAAGATGTCGCACCTCTTCACAGTGAAAACAAAGG--GATATT------GCATGTCTGGATTC ...:....x...x..xx..:.:..x.x...::x...x...-------------..:x:.....x....-.x...:x.---x..::.......x.xx:...:x.::.:.---.....x.....:x.x.:.:.........::x........x:....----------------..::..::x.......::...........................................x....:..............:........:..::x...---..............:x:xxx.x:.x......................::.........x...:x..::....:.x...:..x:x...xxxx:::.x..x:...x...:..--.x....x....-------------------------.:......x.x:....:.::..x.x.:::.:.....:x::..::..:.--::..:.------....x...x..... 40M13D15M1I8M3I28M3I45M16I99M3D110M2I11M25I48M2D6M6D14M 306/424 72.2% 474/94230402 0.0% 74/424 17.5% 129792054 60422501 +3089 chr4 + 190214555 182186738 182186737 182186803 66 TGGGTAAGAAATATACTAATGCATCATATATATATATATATATATATATATATATATATATATATA chr4 - 94230402 28944752 28944751 28944817 65285586 65285585 65285651 66 TGAGTAGAAAAAATAATAACATTTTATAGACACACAAATATATATAGATATGTATATATGTAAATA ..:...::...x...x...:::x.:...x.:.:.:.x.........x....:.......:..x... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 153241986 36972569 +31065 chr4 + 190214555 182193175 182193174 182194304 1130 AAAGTATGTTTCATTGATAAACAAGGTTCTGAA----AAATGAATGGGGAGAA---TATGTCACGAGTATAAAAATGTGTGTAACATTCATTAAATTGTTTGTTAAATAATGTATTCAGACTGACT-GTGTTTCCCAGCCTCTCCTTTGCCCGTTATATGTTCTAGTAAATTAAAGCTCGGAAACCTTTGTCAGAGTTATAATACTCAAACTGACATCTAATTCCCCCGGACAATAGGTACAAGACTGCGAGCCTCTCTAATTCTTTCCAGTCTTTACATTTATTGGTTCTTTTGTAGACCTGTTTCATTCAATCTATTACAAACAGCACTGGTTAAAAGTGTGAAGTTTACCACATTTGACCGGAGGCACATTAAAAAACAATAGCGTCCTGGCGTACATTCCATGCGTCCCAGGGGTATAGCTCTTCATCTGAGCAGCATTTTCATCTATAATTACTACATTAGATTTGAAGTGCTGGCTTGATTAAAAAGATTGACATGTTTATTTTTTGG-CTGACCTATTTGGGTAGATGTGGATTTGATTCATCTGTTTTGTGTGACCCTGTGTTACAAAGATGTTATTAGTTGAGCAAGAATCATGT------TTTATTTTGGAGTCACCATTTTAGCATAGATTTGAAATGCTTTTATTATAGTTACATAAGAAATGGTAAAAGTTGAAATTTTTTAAAAAAGAAATTATGTGTGCACTCACCCAGGTATCATAAATAGAAATGTATTTCAGAATGGTTTTCAGAGTTCAGTATTATTGAGATTGTTATTGAAACGTTTATAAATACTGCATCAAATGGCGTCCACAACTTCATGGCCTACGTTAAAAAGCTTTCACCAGAATTAACATAATCTATTTTTT---ATTGTGCACCATTGCTCAGGATTATGCCTTTTC------TACACATCTGATGTTGTAAA------------ACATATTGTGTAAATAATTGATAATAAACAAACAAATTCTACTTTTGCCCTGGTGTACTTCACCAGTTTCAAGACTTTGAAGTTCCTTAAATAATTTATGGCACTTATTAGTGCAGGCAAATCAAATGGTATCCTTGATCCGAGCTGCTTTTTGTCCTCGTTGTTTCTGAGCAGAATTGTTAAGTGAGCCTTCTGATTGGGACGAAGCTGAGT chr4 - 94230402 52402103 52402102 52403089 41827314 41827313 41828300 987 AAAGAATGTGCCCTTTCATGATAAAATTGCGAAGTGAAAATGAATGAGCAGAGAAGTATGCCAGGACTATAATAATGTTTGTAACATTCATTAAATTGTCTGTTAAGTAATGTATTCGGACTGACTAGTGTTTCCTAGTTTCTACATCACCTATTATGTGTTCTAGTAAATTAAAGCTAGGAAACCTTTGTTGGAGTTACAATACTCGAACTGACATGTAATTCCCCCAGACAATAGGTACAAGCCTGCAAGCCTCTCTAATTCTTTCCAGTCTTTACATTTATTGATTCTTTTGTAAAAGTGTTTCATCCAATCTATTACAAACAGCACTGGTTAGAAGTGTGAAGTTTACCATGTTTGACCTTAGGCACGTT-AAAAACAATAGCTATGTGGCATACCAT-TGTGTGCCCCAGACTTAG---TCTTAATCAAAAGGAGGTTTGGACCTCTAACTGCTCAACT-GATTTGCTATCCTGCTTGGGTTAGA---ACTGACGAGCCGATTCTTTGATCTGACTGGTTTG----GATGTGAATTTGGTTCAGCTATCGTTTAT-ATTCTAGGCTCTGAATGTTTTATTACTTGAAC-TGACTTCTGTAAGTAGTTCACTTTG--------ATT----CAAAGCTTT------CTTTTGTC----------------TGGTCTTGGCTGATGTTTT-------------------------------------GCATATACAGATGTA---------------------------------AGTTTCTTACTGCAAAGT---------ATGGATTAAAT-----------CTTTAGGTTTT----------TTTTTCTCCA--------ATATGCTATTTTTTTGCATTTTGTATTACTG--AAATATAATGCAATTTTATGTTGTGCATATCTTATACTCTAAAACATATGTTAATACATATTATATACATAATTGATAGTAATCAAAC--ATCTTATTTTTCCCACTATATTCATCATCAACTTCAAAGCTTTGAAGTTTAGTAAATAATTTATGAGAGTTTTTAGTGTAAGCAAATCAAAGTGTGCCCCTGATGCTGTGTGC--TTTGTCC---TTGTTCCCAAGCAGAA-------------CTTCAGTTTATAGCCAAACTGAGT ....x....x:.x..xxxx:.:..::..x:...----.........:.x...:---....:..x..x.....x.....x....................:......:..........:........-........:..::...x.x.::..::....:....................x............::......:.......:.........x..........:...............x....:....................................:..........:.xx........:..........................:.................::.......xx......:..-............xx:x....:...xx.-::..:.:.....:xx..x---....x...x:.:x::x:...xx.:..x...:.:..xx.:.-......xx:.x...x:.x.:...:.---.:....:x.::x...:....:-.....:x:....----......:.....:....x..:.:x.x.:.-.::..:x.:.x::..x:.x......x....:.-x..x.:x...------..:.:....--------...----..x..x...------.....:.:----------------....xxx:.:...x:....-------------------------------------::.x...x.:.....---------------------------------..x..x...:..x..x..---------x..x..:....-----------...:.x.x::.----------x:....x...--------...xx.........---...x..:.::.:..--x.:x..x....xx...:------.:..:....x..::.x....------------.......:.:..x..........:...x.....--..::..:....x..x:x:.:.x.x...:..::.....::..........:xx.............:x.x..x......:.:..........xx..::..:....x.x:xx...--.......---.....:.::.......-------------....x.x..:x::.x..:...... 33M4I16M3I70M1I247M1D27M1D18M3D40M1D25M3D21M1I12M4D29M1D32M1D10M6I9M8D3M4D9M6D8M16D19M37D15M33D18M9D11M11D11M10D10M8D14M3I14M2D17M6I20M12I33M2D113M2D7M3D16M13D24M 713/951 75.0% 987/94230402 0.0% 215/951 22.6% 129791072 60423483 +14634 chr4 + 190214555 182206962 182206961 182207263 302 AACATAAGCA--TGAGATGCTCGGAAATTTGTTTGCTAAATCATCTGGCAAATGGTCTTGTTGATGTCTGCTGAGCTGCTCAGAGCCTACAGTTGTTAAGTACTTATTACAGGAACCCAGCAGGGCAAATTA--AGAAAGCTACATGTATGCTTGTTATTTTAGGACTATTATGCTATGCTTCTGAGGGGGCTGCATATTGGACTTTCTGACCTGAAAGGACTTGCTGTTCTTTAGTCAGAGGTTGCTGCGTGGAATCTGAATCTTTGACCCGGCAACAATAAAAGTGATTATCTTCAAGGGGGAG chr4 - 94230402 52410004 52410003 52410307 41820096 41820095 41820399 304 AGCATATGTAAGTGAAAATCCTGGAAATATGTTTGCTAAATCATGTGGTAAATGGTCTTGTTGATGACTGCAGAGTTGCTTTGGGGATGGAGTTGTTAAGCACTTATTATAGGAATCCAACAGGGCAAATTAAGAGAAACCTGTGTGTGTGCTTGTTATTTTAGGACTTTTATGCTCATCTTCTGAGAGA--CTCATGTAGGCCCTCATGACCTAAAAAGCCTTGCTGTCTTCTAGTCAGAGGTTAACTTCTGAAATCTCTGTTACTGACCAATCAACAATGAGAATAACCGCCTCCAACGGAGAG .:....x.:.--...:.xx.::......x...............x...:.................x....x...:....:x.:.xx.:x..........:........:.....:...:............--.....x..:::...:...................x.......xxx........:.:--:x...:.x..x.:.:x......:...:.x........::.:............:x:x:x..:.....xx:.:x:.....x:x.......:.:.:.:.::::..:...x..:... 10M2I120M2I56M2D114M 223/300 74.3% 304/94230402 0.0% 6/300 2.0% 129796958 60417597 +10033 chr4 + 190214555 182220401 182220400 182220849 449 AAGTCGGCTTGATAAAGAAGAGCAGGG--CCTCATCTCAGCTCTCCTGCCTTACACTGTTCAGGGCTCTGACGGCCG-ATCTCTTCCTCACCCTTCACTTCGTCCTACAGTCTCTTCTGGCATCACGCAGCA-TGCTGCGATTCCAGG-----TCCAAATGTGGGGGGCACTGCTGTGAGTCCG--TGGCCCTG----------TAGATTGATAGGAAACTGCGCAGAGAAGGTTCATGCTTCTTGCTAGCCACAAAGCAATGAACAGGTAGTAGTATTTTCTTATGGATGGAAAGTTTAGGTAAAAATTGTAG-TCTTATGATTACATTACATGGTATTGTATAATTAC-----CTAAGAACTAGCCCAT-GTACAGTGTACA-TTTATGTGTTTACTAAGACCATAG---------------------TTTTTCCCTTTTTTAGTTCCCCTTTAATAACTGGTAATTAATCCTGTGTAATATTAAATAATAATCAAC chr4 - 94230402 52420229 52420228 52420710 41809693 41809692 41810174 482 AAGTCTGCTTGA---ACGAAAGCAGTGAACTTTCTCACAGCCCTCATTCA----GCTGCTCAGGTCCCTGACAGCTGGATCGCTTACTGACCCTTCTCTTTGT---ATGATTTCTTCTGGGATGAAATATAAGTACTGCCGTGCTGAGCATTTTCCAAACGTAGGAGGACCAAACAAGAGACAGACTTATCTTAGATTGATGACTAGATTGATGGTATGCAGCACAGA--AGGTTCAAGCCCCATGCTAGCATGAAATAATTTGACAGATAGAAATATTTGCTTATAAATTGAAAGAGTAGGTAATAATAGTGGTTTTTATGATTACATTACATGATATTTTATGATTACACAGACTAATAGCTAGCAGATGGCAGAGTGTACATTTTACTTGTTTACCAAGATGATGGATAGCAGTGATTGAAAAACATTTTTTTCCTTGTTACATTACTC--TGAAAGCTTGTAGTGGA---CAGGCAATTTAAAATATGAGTCAAC .....x......---.x:.:.....x.--.:.:x..x....:...x.x.x----:...:.....x.:.....:..:.-...x...x..x.......x...:..---.:::.:........x..x.x::.xx.-.:....x:.x.:::.-----......:..:..:..xx.x:x::x...x.x.--.x::.:.:----------.........:.x.x:.x..:....--.......x..::.x.......xxx...xx.x.x:....:...x.:.....x.....::..x.....xx.......x...x..:.-.:..................:....x...:.....-----....x.:.....xx..-.:.x........-....:x.......:....:x..:.---------------------.....:....x..xx:..x.:.--.:.x.:..x...:.x:.---::x.:...x.x.....xx.:..... 12M3D12M2I21M4D23M1I25M3D26M1I15M5I31M2I8M10I24M2D84M1I35M5I16M1I12M1I24M21I22M2D17M3D25M 303/432 70.1% 482/94230402 0.0% 67/432 15.5% 129800172 60414383 +3601 chr4 + 190214555 182229581 182229580 182229672 92 CCTTAGACTGTGTGTGCGTGTGT--------ATGTGTGTATATATATGTGTATATATATATATACACACACACACACATATATGTATATATAATTAAGCC chr4 - 94230402 8395779 8395778 8395878 85834525 85834524 85834624 100 CCCCAGGCCATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAACCC ..::..:.::......::.....--------....:.x..:....:.:..:x..:..xx...:...............x.:.::x..:x....xx..x.. 23M8I69M 64/92 69.6% 100/94230402 0.0% 8/92 8.7% 173833802 16380753 +3070 chr4 + 190214555 182229593 182229592 182229644 52 TGTGCGTGTGTATGTGTGTATATATATGTGTATATATATATATACACACACA chr4 - 94230402 70982629 70982628 70982680 23247723 23247722 23247774 52 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACA ....:...............:....:.x::..x..:.:.:.::.:....... 52M 39/52 75.0% 52/94230402 0.0% 0/52 0.0% 111246964 78967591 +7350 chr4 + 190214555 182236278 182236277 182236480 203 TCTGAAATAACAAGTTTAAAGAATG---------CCTCCTGATAGACAGCTTTCTGCAAATACGCCTGCAGTTACTCTCATCACTCCTGCATCAGTGTGGTTGATAAGAAATGACAAACTAGAACATGTTTGGTTAAATAGACCATCTGCCTAT-TCATAATATGGACATTAATTCTTATAAACAGT-TACTTCAGC-----TGTGTGAAATGCCTGAT chr4 - 94230402 52427156 52427155 52427374 41803029 41803028 41803247 219 TCTAAAGTAAAATATTTTAAAGGCATACATACATCTTTCTGAGAGACAGATTTTTGCAAATCTGTCTCCATTTACTCTCATTAGAATTAAATCGGTACAATTGTTAACAGATGTCAGACTGTAATGTTTCTGGTGAAACAGACCGTCTCCCTGTATCATAATATGAACATTTATGCTTACAGTCAGCATACTTCAACAACTGTGTCTGAAATGCCAGGT ...:..:...x.x:...x..:::::---------.:.:....x......x...:.......x:.:..x..x..........:.xxx:.:x...:..::::...x...x.:...x..:...:x..::.x.:....x...:.....:...x...:.-..........:.....x..x....:.:x...:-.......:.-----...x.........x.:. 25M9I120M1I32M1I9M5I17M 143/203 70.4% 219/94230402 0.0% 16/203 7.9% 129809122 60405433 +3216 chr4 + 190214555 182281502 182281501 182281569 68 TTTTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTTGAGACAAAGGTCTTGC--TATATTGCCCGGGCTG chr4 - 94230402 51318591 51318590 51318660 42911743 42911742 42911812 70 TTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTGGATTTGAGTGGTGTGCATCATATTGCTCTGCTTG ..x................................x..xx::.:x.x:x...--:.......:.x.x:.. 52M2I16M 52/68 76.5% 70/94230402 0.0% 2/68 2.9% 130962911 59251644 +3197 chr4 + 190214555 182281502 182281501 182281537 36 TTTTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTT chr4 - 94230402 51655342 51655341 51655377 42575026 42575025 42575061 36 TTGTTGTTGTTGGTGGTGGTGGTGGTGGTTTTTTTT ..x................................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 130626160 59588395 +17574 chr4 + 190214555 182284168 182284167 182285066 899 GTTACCAAAACCTGCCTCTCTCCTCTGACTGGTATCACTTTCAGATGAAAACGAGTGCATGAAATCGGAGCAT--------------------TGCCAGACTCCCAGTTTCCTTTCTACTC-CAAGATTATATGTTGCATGACTCTACGTTTGCAAGATTTTCCAGATGACCCCAGAGGGGCATATTCACAGATGTTAATCTCTTATAAAGTTATTATAAT---------TTTGGTTTTTTAAAAATGTGGGTAATATGTAACATACCATTAATATCCAGGCAGTCTGGTATTTTA-AATCTATCTGCGGATC--GTACTG------GTCAGCATTATAATAAAAGGTAACTTTGTGGTGTTTTCAGCGTATTGAGGTAAAATGAAGGGGAAA-------TGTTGAACCTGTGTTTA-TTACTGTGGAGAGAATCTGACACTCCACTGCACCCTGATTATTTTGTATACCCTAAGCTAAATAGACTAAC-GCTGTTACGAAGCTGTCAGGAGAAGCGTGTCAGACACTAGGTGTATCATGCAGTCAGACTGGTGTCGCGTTGGAAAAGCCAGTAGTTGGGAAGGGAAAAAAAAGTGACCTTGTACTCTCAACATTGTCTTTACACTGAGTAGAACAGATGAGATTGTGAATTATTCAGAACACCGAAAGCTTATAATTGTTAGCAGTGGTGGCGGCGATA--------GAGGAGAGAGACAGGGCTGTTT----TAGTCCAAATGTCTGATTCTATTAAGCATCAAAGGAATCTTTTTCTTAAAACCATCTTTGGGAATTTGGGT--------------GGTGTGGA----------CCCCATG--------AAGAATCCTTCCCTCTGTTTGATACCTTTTTGGGAATCTGGGTCAAAGAGGCACAAGTTAATATTTAGCATATATATATATTTGGAAATGCAGAGTGAAAGAACAAAGACACTCTAGGGAGAGGATTTGCTGTTTCAGC chr4 - 94230402 52441291 52441290 52442230 41788173 41788172 41789112 940 GTTATATAAATCTGTCTTGATC-TCTGGTAGATAACATTTTCAAGTAAAAC----TGCATGTAATATATGTATGCTGTATGTATACAGTATCCTGACAGCTTTTCACTGTACTTCTAAATCATGAGATTAAGAAGGAAACGGCACTGAATTTACAGCCTTTTCAAAAAGTCCT--AAGGAGAATATTCTCAAGGGTTAGTCTTTGGAAAACAGGTGATAGTGCTGCTCAGTTTTATTTTTCATAAAT-------ATATTTCAAATAACACTATT-CCCATGCA--TCAGTACCACATCACCTGGCTACAGCGCAGGTGCTGACATCTGTCTATATTGTGATTAAGCACAGACTTTTTATACGTCAAGCATC---AGAAAAACAGCTCGTGAAAACATGAGTGCTGGCACTGTGTCTAAGTACTG------AAACTTGTCACTCCGCTGTGCCCCCGTTATTTT-TGTATTCTAAACTAAACAGACTAACTGCTGCTAAGGAGCTTTCAGGGGAGGCATGTCAAACACGAGGTGTATCATGCGATTGGACCAGCGCTGGGTTGGAAAAGTCAGTGGTTGGAGGGGGAAAAA---GTGACCTTTTTCTCTCAACGTTGTCTTTACGCTTAAAGGAACAGATGAGATTCTGAATTATTCACAGTACTGAAAGCTTATGATCACCAGCAACAGTCACAACAGCAGGTTATAGGAAGAGGTTTATGGGAATGTTTTTTGTTGTTAGAATGCCTGATTATGAAGCTCATCAAAGGATTC-ATTTCACAGAACTGTCTCTGGGAATTTGAGTATTTAAGGTCTGTGGGTATGAGAGCTGTTTATTCCCAAGTATAGGGAAAGAATATTTTCTTCC------TACTTATGTAAGAATCTGTGTTGTAATA--ATGGCTTAATA-TTATCACAGGTCT-----------TCTGCAGTAATGGAACAGAAAAGCCCTCTGAAAAGGGTTTGCTGTTTGAGC ....:xx...:...:..:xx..-....::x.:..x..:.....::.:...x----......x...xx:x.:..--------------------..x...x:.::..x.x.x...::x.x..-::......x:x:xx:x.:.:.x..:x:...:..:xx.....x.:.x.x..:--:...:.x......x..::x....:...:.x:x...xxx:.x...:.---------...x:.....:.x....-------....x.x.x...x..:..x.-:...x...--:::...::x:.-x.:..:x..:.:.xx.--..:...------...x::...:.:..x..:x::.:x:..x.x:.::x.:x...:.x---..:x...xx.xxx.x....-------..:..:xx......:..-x.....------:..::..x......:...::...:x:.......-.:..::....:.....:........-....:..x.:....x.....:..:..:.....:....x.............::.::...::.:.::.x..........:....:.....:::........---........x.x........:..........:..x.:x:..............x...........x.::..:..........:..::::....:::..x:.::.:::.--------..:...:xxx.::..:x.....----.x..:x:....:......x.:xx:xx..........x..-x....x:.:...::...:..........:..--------------...:..::----------:....x.--------......x:..:.:..:------...:.x.x.::.......x..::x.:x:--.:::x......-...x..:.x:.x.-----------.x::x...:.x:.....:.:.x:.:..xx.:.:...:..........x... 22M1D28M4D18M20I28M1I51M2D46M9I17M7D20M1D8M2D11M1I16M2I6M6I44M3D19M7I17M1I6M6D33M1D25M1I100M3D107M8I22M4I39M1D31M14I8M10I7M8I16M6D28M2D11M1D13M11D51M 558/848 65.8% 940/94230402 0.0% 143/848 16.9% 129842877 60371678 +22509 chr4 + 190214555 182302683 182302682 182303117 435 ATCTAATTCTAAAATGGAAGGATAG----TGAGGGCTTTCTTAACATTCAGAATGAGAGCTGTTCATCTGACAGTCATTTTTCCTTTAGAGTGC-TGGTTTTGGAGGCATTCTTTCTCATTTCCATGTGAGAAGACAGGCTTCTGTCATTAAGAACTGAGCTTCCAGGTATGAAGTCCTGAGATATCCATGTATTGAGACTCATCACTTTGACTAATGGAAGATCCTGACCACATATCATCTTAAGCACCTCTTCACAGTGTGTCATTTTTCCAGCTCAGTTGATTTTTGATACATCTCACTTTATCAGTCATCGAAGTGGAAATTTCATCACTCTTATATGCTTTCTGAGTTTTTCTTAGTGTTTGTTTGTAATAGGTTTTATGGGTGATTAGTTATGGGAATTGCG-GCATTCTCGGTGATGGGAACCTATCTTAATTT chr4 - 94230402 52450056 52450055 52450491 41779912 41779911 41780347 436 ATCAAATTTTAAAATGTAGGGTTAGCCCATGAATTAAGTCTTAT--TTCAGGCTGTGAGCTGGT-GGCTGGCAGCCCTTCTGTCCCCAGCTTCCCTGGCTTTGAGTGCTTCTGCTCCGGTCTCTGTGCTGGAAGACAGACTTTTAATATTAAGAAGTGAGTTTCTAGATATGATGACCTGAAATATCCATGTATTAAGAGTCATCAGTTTGACTAATGGCACACCATGGCTACAGATCATCCTAAGCACCTCTTCAAAGTGT--CATTTTTCCAGCTCAGTTGATTTCTGACATATCTCACTTTATCAGCCATTGAAGTGGAAATTTCATCACTCTTTTATGCCTTTTGAGTTTTTCTTAGTATTTGTTTGTAATAGGTTTTATGGGTGATTAGTTGTGTGAATTGTGAGTATTTTTGTGGACAGGAGACTTTCTTAATTT ...x....:.......x.:..x...----...:xxxxx.....x--.....:x..x......x.-:x...:...:.x..:.x:.:::..xx.x.-...:....::x..x.::x:..:x:.:..::..:x:........:...:.:x:........x....:...:..:.....x.x.....:.............:...x......x............x.x.:.x..:.:...x......:..............x.....--.......................:...:.:...............:...:.......................x.....:..:...............:.................................:..x......:.-.:...:.:.xx..::...:x..x......... 25M4I15M2D18M1D29M1I167M2D144M1I32M 336/430 78.1% 436/94230402 0.0% 11/430 2.6% 129852627 60361928 +12052 chr4 + 190214555 182306808 182306807 182307019 212 AATTGGCATCATGTTGCCAAACTGTAATAAGCCTTAGGGGAGCTCAGTGTTGAAACTACTCAATTGAATGCTGCAATTTCCCATAAC-AATTTAAAAGGCCTGCAGGCATGCTAAAGTCATAGCTGGATCTTTCAGTTAACACTCTGTAACATGACCCCAAAGTCTCATTTACATCACAGCAATTAAAATATATTCCACATTACACGTTTACT chr4 - 94230402 52451624 52451623 52451836 41778567 41778566 41778779 213 AACTGCCATCCTGTTGCCAAACTGTAACAACCCTTTGGGGAGCTTGGCGTTGAAGCTACAGAATTGAATGCAATAATTTCCCATAACTGCTTTAAAAAGCCTGCAGGCATGCTGAAGTTGTAGCTGGATGTTTTAGGTAATGCTTCATAGCATGACTTTAAATCCCCGTTTACATCTTGACAATTAAAATATGTAGCACATTTTATGCCTACT ..:..x....x................:..x....x........::.:......:....xx..........x::.............-:x.......:...............:....::.........x...:..x...::..:::..:......:::...x:.:.:........x:::............:.xx......x:.:.::.... 87M1I125M 163/212 76.9% 213/94230402 0.0% 1/212 0.5% 129855184 60359371 +7762 chr4 + 190214555 182319189 182319188 182319434 246 TGTTTGCTAAATATGCACACAG---------TGACCCTCTTCCTTGTGTAGGACTGTGCAGTCACTATCAAAGTGCTCTAACAATTTGGCATTACTTAAGC----TGCATTTCTT--AACCTTCTCGTCTTCAGCCTTGAGTGG-AAGAGATAACACAGAAAACTGCCTTTTGAAGTCATATTGAACTCACTGACTTCCATCAATGAAGCATATCAGTAGT--TGCAAATATTGCAGTGTAGATTAAATCCTCGAAGAGTTTGA chr4 - 94230402 52453726 52453725 52453984 41776419 41776418 41776677 259 tgttttTTCAAAATACCCACAAAAAATGCGCTAGCCCTCATTGTTTATCATGGCAGTGTAATCACTGTCA--GTATCTCAATAATCTGGTGCTG-TTAAACAGCTTGTATTTTTTGTAACCTTTGCGTTCTTTGCCTAGAGAGGTGATAGATAACCCAGCAAACTGCCTTTTGATGTTTTATTGAATTCATTGACTTCTGT--GGGAAGCAGATCAGTAGTTCTCCTCATGCTACAGTATAGATTAAATCTTTGAGGATTTTAA .....x:.x..x..:.x....:---------.::.....x.:x..xxx:.x.:.x...:.:.....:...--..:::::..:...:...:::.:-....:.----..:....:..--......:x...::.:x....x...x..-:.x.......x...x..............x..:x.......:...:.......::.--:x......x.........--.x.xx..::.:....:...........:.:..:..x...:. 22M9I39M2D22M1D6M4I10M2I27M1I56M2D18M2I41M 171/241 71.0% 259/94230402 0.0% 23/241 9.5% 129865463 60349092 +19195 chr4 + 190214555 182323984 182323983 182324260 277 ACCAGCAGGACTGATGTGCACACAGAAGGAATGAAGTATGGATGTGAAAGAACGCAGGCCTTACTGCTCCCTGACCAAGAGCAGACGAGAGAAGGAACGGCGCTACACAAATTCCTCCGCAGACAATGAGGAGTGCCGGGTACCCACACAGAAGTCCTACAGTTCCAGCGAGACATTGAAAGCTTTTGATCATGATTCCTCGCGGCTGCTTTACGGCAACAGAGTGAAGGATTTGGTTCACAGAGAAGCAGACGAGTTCACTAGACAAGGTGGGTAA chr4 - 94230402 52456247 52456246 52456523 41773880 41773879 41774156 277 ACAGGCCAGGCTGATGCGCACACGGAAGGAATGAAGTATGGATGTGAAAGAACGTCGGCCTTATTGCTCCCTGACAAAGAGCAGGCGGGACAAGGAGCGGCGCTACACAAATTCTTCTGCAGAAAATGAGGAATGCAGAGTGCCTACACAGAAGTCCTACAGCTCCAGTGAAACCCTGAAGGCTTTTGATCATGATTCCTCTAGGTTGCTGTATGGAAATCGGGTAAAAGACTTGGTCCACAGAGAAGCAGATGAGTATACCAGACAAGGTAGGCAA ..x:..x:.:......:......:..............................:x.......:...........x........:..:..x.....:.................:..:.....x........:...x.:..:..:.................:.....:..:..x:....:....................xx..:....x..:..x..:x.:..:..:..:.....:..............:....x:..:.........:..:.. 277M 229/277 82.7% 277/94230402 0.0% 0/277 0.0% 129867737 60346818 +3326 chr4 + 190214555 182329676 182329675 182329772 97 GAATGATAACAACAAAAAAGCAACAACAACAAAACAAACAATGGCCACCAAATGCTGGAGAAAAAATTAAAATCATAATTTACAAACTAAAAATGGC chr4 - 94230402 42472529 42472528 42472625 51757778 51757777 51757874 97 GAACAACAACAACAAAAAAGCCACAACAACAGAGGAAAAAAAAATTGAAGAGGAAGGGAGAAAAAAATAAAGCCCAGAACTGCACTCTGCAAATGGC ...::.:..............x.........:.:x...x..x:::::xx:.:x:xx..........x....::.xx:.x:.:..xx..:x....... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 139857147 50357408 +9910 chr4 + 190214555 182339137 182339136 182339545 409 AGAATTGAGTTTTATGAAAAAAGACAAAAACCTGAAACATTAATCAGATCCACTGGGCTAAT-TACTGCAACTCCAAAGTTTATTACTTTT-AAATATTAACTGCTTAAAATGATTCATTTAGAGATCAAAATGATTAATCCTTCTCAGTCACTATAAATGTCAGCGGCAGGATTAAAGGATTTAGATGGTCATGTTTACTCAACCTTACATTTCTGTACTTAAAGACACAAGTTAAATAGCTCTAGTTTATCATTGTTTCATGTTA-ATGGTTTT-----CCTCTTAGCTCCCTCTTTTAGCTCCCCTGCCTAACTGATTGTTAACTAATTTTGGCTGTTAAGTAGGCAAGGGCTTCTTTCAGGCTCGGCAGCCAACCTGCTTTGTGGATTACCCACCAGAAGGTGTGAGTAGATA chr4 - 94230402 52461086 52461085 52461472 41768931 41768930 41769317 387 AGGATTCATTTTTA----AGATTTCAGAAACCTGAAGTATGAATTGCAACTTCTAGTCTAATGTAACAGAATGTCAAATTTTATTGTTTTTTAAATATTAGCTGCTTGAAATGACTTATTTGGGTAGCTAAGTGATTTATC-TTCTCAGTCGCCATAAATGTCAGCTGCAGGATTAAAGGATCTAAATGGCCACAGTTTC-AAACCTAAAGCTCACATACTTCGAGCCTTCCCTTAAGAGGCCATGGG-------------AGGATAGATGGATCTGACCACTTTCAAGTTTCCGCT------ACCTGTGCCT---TGCCAGTGAGCTGGTTTTGACTGTCAGGTAGG-AAAGGATTCTCACCAGAACTGCA-TTAGCCTGCTGTGTGGATTATTTACAAGCAGGTATGAAATGATA ..:...x.x.....----.:.xxx..:.........::..x...::x.x.:x..:.x.....-..x::x..:x:....x......::....-........:......:......:.:....:.:x.x.x..:.....x...-.........:.:............x...............:..:....:..::x..x.-x.....x.x::.:x::.....x:..x.x:xxx....:x:..:x.:.x-------------.x.x..-....x.:.-----.:.::x..:.:..x..------x..:x.....---..x:x..x.:..::.....:....:.:.....-..:..x....:x.x:.xx.x...-::.:......x.........:::..x..x....:...:xx.... 14M4D44M1I28M1I49M1D58M1D47M13D6M1I8M5I16M6D10M3D32M1D23M1D44M 259/379 68.3% 387/94230402 0.0% 38/379 10.0% 129878051 60336504 +51812 chr4 + 190214555 182345007 182345006 182347592 2586 TTCTCTTCTTTTACTCTTCTTTTGACATACT---------------TTTTGGTTCAGATACGTGTTCACATCTCTCTGATAAGCACACTTTGATTTGCAGCTAATTGTAGCAACTGATTTTCATTATTTATGAGTGTCATTGTCGGAATCCATTTGGAAGTCTGACCGAGATAAAGCTGATTC---------CAACTTCTGATATGACCACAGCAATAAAGCAATTAACCACACTAGTTAAAATGTGTGGCAGCCTGGAGG-GTGCT-AATATCTTTACAACCCAATATTTA-CTACATTGT----------CCATTAGGTTTGATTTATTTCCGAGAAGATTCAACATGGTATCATTTTATCACAAATAATTTATAATACCCTCTTTCAAAAAATATAATGTATGTTTCTCATATCAACCTATTAGCATTAAAATGTTCACAGATTTAAGAGGTAGAAGTAGGGAAATCAAAACTATGAGTAATAT--AAATGCTTAATATACTTAAAAGGTTTGGTTATGAGATAGCAGCATTTAAATCAGTCTTTGTAGGTTACTATTCTTTACCTATATTTTGATTCTGATTGGCACCTAAATCTCACACTCTACCATGTCAACCAGAGACAAGAAATAGAAAAGCTTTATGTATGCATGACAAGCAAACATTTTTCTCACTCTTCTCATCCATA-GTAGTATAAAACGTGAAATTTCCAGA-ATAAATACAGGATT--GGAAAAGTCATTAATAACAGCAGTCATTTTAAAGTGTCACCTAATTTAAACACTTTTGCTTTAAGTTATTGCAGTGTCATGAGTTTTATTATGCTCAATTTATTAGTAAAGGCCTGCAGAGTTCACAGCCATTTATTTTTCAGGGAACTTGATTTTATCATTAATTTTTAAATACGTAATACTCCCACTTTATTTTTAGAGTGCACTTTATTTGCAAAGATTGGTTTACTCTGATCAATACAGATGTTTTCAGGTGTGTAGTAAAGCAAAAAGCCTAGAAAGTCAAAAATGTACAAAATATGCAGCAAATTTTTTAGACGTTATACTCCAACATTTAATGTGTATATACACC----CACCCCACACACACACATATATACATACATACATACATACATACATACATACATACATACAAAATACTACGTGTTATGTTGATTGCTAAGTCAAGGCGGAAAAATATAAGAAGAATGACCAAGCTCCTGTTTCTACTGTTTGAGTAACTTATTCTTGAAGGGAAACTTTTCTCTTCCAAAGGAGTGACATCTGGGTGGGAAAATTT--TATTGTTGGGGACTCG--AGCCAGGACACAGAAAATAATTCTGACAA----TTTCCATTGCCTCACAAGTC-------------TGCTAAACAAAATTCTATCATTGCA---CTAATCCTTTC----TCTGGGTTGAGTTCTCATGGTTGG--GGCCACTTTACTTGCCCATCTCTCTGGAGG-TACTT---ATGGGCTTAAAGAGTTGACAAAGGAGCTCTAAGTT--------------GGGGCCCCGCC-----CTCCTCCCATAATTGCGCCCACTTGATCCTATGCCGTGTGACGCTACTGTAAA-CGCCTGGTGCTGATCGCTGAAAAGCCTAAATGTTT-GAGTGTTTATTTCTGA------AAGACATTCTTAA-------AAAAAAAAAAAAGAAAAGAAACTAACACTGAACATATACTCACTAGTTGTTATCTTTTTTTCCCCCTAATTAGGACAGAATTTTACCCTAAGGCAGTTAGGAGTTTGTGAACCAGCAACTCGAAGAGGACTGGCATTTTGTGCGGAAATGGGGCTCCCTCACAGAGGTTACTCTATCAGTGCAGGGTCAGATGCTGATACTGAAAATGAAGCAGTGATGTCCCCAGAGCATGCCATGAGACTTTGGGGCAGGGGGGTCAAATCAGGCCGCAGCTCCTGCCTGTCAAGTCGGTCCAACTCAGCCCTCACCCTGACAGATACGGAGCACGAAAACAAGTCCGACAGTGAGAATGGTAAGTTTCCTTTTTGGCTTTATA---ATGTTGGCAT-----TCAGTGCTT--CTGTCTGTTTTGGTTGACTCCGCGGGGGGGGATGTTTTTCTTTCTCTCCTTCCTCTCATCCTTCTTTCTCTCTCTTTCTTGTCCATTTCTTTTTGTTTTAATGTAGTAGAACTCAAGAAATGTCCTTGAATAATGCATTT---------------TTTCCTGGAAAAAAAAATCAATATTTGACATCAGATTGTTAAATTAGGCAAGCAGTCTA----CAATGTTTTGGCTATAGTTTTGAAAAACAGGTTAATCATCTACAGAAAAAAAAAATAGCTTTGACTTCTCTTGGACCATGTCACCTGTTGTCTTCTGTGGGGTGGCAAAGCACGTGTTGATAAAGTTTACCCCAGA-GCCGTCTTGCAATCAAAGATGTCTTTGTAGATTCCTC-TTGAAGATATCTCAAAGAAGTTGCAAAATCTTAGAATGGATGAGTGAGCACGCAGAATAGTTTATTAACAGGGCTCTAGTGATTGAAGAACAAATATGATCATGCTTTAAACTTAAGAGTTGATGAGAGCAATTGAAATCTTGGTAAAGAGGGGGAGTGTGGCCTTTAATGTTCTTTGGGGACTGGATTACTAAGCAATT-AAATCCACACACAAAAATTGGATTTTAGGATATCCAAATAGCAGCTTT chr4 - 94230402 52469799 52469798 52472058 41758345 41758344 41760604 2260 TCTTCTCCTTTTGCATTTGCTTAGATATGCCACCTCCCCAGCAGCATTTCCGCTCAAATCTGTATTTACAGC-AGCAAATAACTACAGTTAGCTTTGTACCTAATGGCAGTAACTGGTTTTCATTATTTATGAAACTCATTTTCAGAATTCATTTATGGTTCTGACTGTGAAGTCAGTGACACTTGAAGTGACCACTTC--GTATGACCACAGCAATGAAGTAATTAATTGGATCACTTAATACCTT-----GCCCAGTGACGTGCTTAAACTCTTAATATTTCAGGAATTAATTACATTTTTATATTCTTTCCATTAGTTTTTATTT------GAGGGGAGTC----TGGTTTTGCTGTATTATAAGC-----------------TTCAA----------------TGGTCTTACAAACATGT----------ATTTTCATGTATTTATAA------------------------ATGACTAATTTTGGAGTGCTTAGGATGCCTATCAGAT--------------GCAAAAATTGAGCGTGTTTT---------------------------------CTAATTTGTTCCCAGAGCTATCAGATAAC--TGTGAGCCAGA--------ATGGAAAAGCATTATGGGTGC-TGGCATGCAAATGAGCTTGCAAAGTGTCT-----ATATATCATACAGCATCTTAAATCTACAGACATAAAAGCAGAATGAAGACACAGCCGTTAA-AAAGGCAGTCATTTTTGAGTGTCACATAACTTAGACACTTCT-----AAGTTATTGCAGTGTCATGAGTTT-ATTGCACCTAATTTATTAATA-----------------CAATCATTT---------GGGATTCGCTTATGTC-----------------------TCTCACTCTGCCC----------------------------------------CAAAACAGAGGCT-----------------------------GAAAGTC-----TGCTTAAAATGTGCAGGCTCTGCTTCAG-CAGTACAAGCCTGAATTCAGTGACAGCAAATGCCATCTTACCGCAGGCCTGCAGGTAATGGGAGGCA-GTGTTCCTGTTTGTTTACATTTGTGCAT----------------------------TAAAGGAGAGCAGAGAGCTTCGATAAAGACCAGAGGGATTGTGCTCCCATT-----------TAATTTTTCCAGTGCCACATT------------AGGTGATGTCTGTACAGGAAAATATCCTGTTGCTTAGGCCTCTCTAGTCAGGACAAAAAAGGCAATTCTGACAAATACTTTCTACTGCTTCACACTTCAAAAAGGTAAAAAGGCAAAAAGAAAAGCTTGCCGTTTATTTCTAATTCTTCCATGTGCTGAATTAGCTTCTCTCTGTTTGCAGGTTCTGTTATGTTTCTTTCCTACACAAGAACACTTTTGATGTGTTGAAGCAGTTGCCAAAACAGTGCTAAGGTACTCGGAATGGAAAGGGGCACTGCAGAGAGCTGGAGACAGAA--GGAACCACTTGATTGTAGTACATGCAGAGTTTTGACAAAGCAACTTATG-TGATGCCTGAGAAAATTAGACACATAGAGTTTTTACTTCTAACTTCttaatttattctttatttttttaaaaaa------------------------------ttCTCACCTTCTGTTATCTTTTTTTCCCC-TAATCAGGACAGAATTTTACCCTAAGGCAGTTAGGAGTTTGTGAACCAGCAACTCGTCGAGGACTGGCATTTTGTGCGGAAATGGGGCTCCCCCACAGAGGTTACTCTATCAGTGCAGGGTCAGATGCTGATACTGAAAATGAAGGAGTGATGTCTCCAGAGCATGCCATGAGACTTTGGGGCAGGGGGGTCAAGTCAGGGCGCAGCTCCTGTCTGTCGAGCCGTTCCAACTCAGCCCTCACTCTGACTGATACCGAACACGAGAACAAGTCCGACAGTGAAAATGGTAAGTT-----------TTTACACATATGCACGTATATAAATCAATGTTTTATTTGCTGTCTTGGTTGAC----------------------------------------------------------ACTCAATCATTTCAAGTCATT---------AAAAGTTCAAGGAATGGCCTTGAATTATTTATCTACTTTTTTTTTTTCCTCCCCTTCCCAGAAAAGTCAATATTCACTATCAG--TCCTAACTAATAAAAGC--TCTGGGCTTGATGTTTTGGCTGTAATTTTGGAAG--AGTTTCATCAC------AAAAAAAGATTAGCTCTGTTTTATCTTGGGCCATTTCACCTGTTACCCTTTGGGAAGCAGCAAAGTAAGTGGTGATAAAGTTGATCCCTGAGGCCAGCTTGCAATCAAAGGTTTCATTGTAAACTCCTCTTTTAAGACATCTCAGAGAAGTTGCAGAATCTTAGAACGGATGAATGAACACAAAGAATAGCTTATTAACAGGACTCATGTGATTGGAAAACAAATTTGATCGTGCTTTAAACTCACTAGCTGATGAGAGCAATTGGAATTGTGGTGAAGAGGGACA-TGTGGCCTTTGATGTGCCTAGGGGACTGGATTACTGTGCAATTAAAATCTGCAAATAA-----------------ATCTAAACAGCAGCTTT .::...:.....:.x:..x:..x..:..:.:---------------...:x.:...:..x:..:..:...x.-xx.x:....x:...x..x.x....:.x.....x.:..:.....:................:xx.....x..:....:.....:x::x......:.x..x:xx:x...:x.---------.x.....--:...............:...:......:::x.::.x....x.:x.x-----...::.x.:-.....-..xx....x.:.x::..:x.x...-:......x.----------.......x...x....------...::..x..----....x.:::.x...:.:..::-----------------.....----------------.xx..x..:x...x.:.----------..x....::x.....x:.------------------------....x....x.--:.:......:x..:.:..xx..:.--------------...:x.x..:.::xx..:..---------------------------------..:...x.:x..:.:.x..xx..xx:x..--...x.:.....--------..:.......x.....x:...-..:..x.....::xx:..x:x.xx:x...-----...-:.x:..:.:x.:x.x....:.x....-.....x:...:..x--.:x.x..:.:....-..x:...........x:........x...:...:......:.-----........................-...:::.::.........:..-----------------..::.....---------..:.:.:.x..x.:..-----------------------..:....:.::::----------------------------------------...x.....x.:.-----------------------------.......-----..:x:.....:.....xxxx.x:..:..-.:x..:.xx..x:x...:.:..xxx::.x.::..----:...x..x:.x::..x:..xxx:x.x:..-:::.x.x.::x.::x.....x::.:...----------------------------...:xx.::..:..:.:x.x::.x..::.:x.xx::.x.:x..:.:.:.:.-----------.x...:..xx..x.xx..x..------------::....::....x:::.......x.--.:...:.x:..x...x--..:.......x.:..:::...........----....:.:...:.....xx..-------------x..x...x:...xx..xx.xx.x:.---.....:...:.----x...::..::x.....x:x...x.--..::x:x...:x.x:.:x..::x.xx:..:-:....---...x.:.x..:x.....x....:x..:x.....x.--------------.....x.:..x-----..xxxxx..x..--.x:x.........:x..xxx.:..:::x.:.x:x::...-.:x..x:..-....xx....:..:x:..:.:::x.-....x....:....:.------..xx:......x.-------......------------------------------.x.....:xx:..................-....:...................................................xx..................................:....................................................x.........:......................................:.....x...........:.....:..:..x.................:.....x.....x..:.....:.................:...........-----------....:.---...:xx.:..-----...:..:..--:.xx....:.........----------------------------------------------------------x..::x:......xxx.::..---------x.:.::.....:....x........x..x:..:.---------------.::...xxxx.:....:........::x:.....--.x:...x.x.x:x....--...:----::...........:..:.....:..:--..x..x....:------.......:.x.....:..x:..x......:....x.........::.:.:..x.::.::......:.x...x..........x.:...x..-...:x.............:.x..x.....:.:.....-..x....:......:..........:..........:......:...:...:x.......:...........:...xx.......:.:.......x.....:...........:.xx..:...............:...:x....:.......:x.-..........:....x.:.x...............:x......-.....::..x.:..-----------------...:...:......... 31M15I26M1D110M9I7M2D46M5D9M1I5M1I24M1I9M10I16M6D10M4D21M17D5M16D17M10D18M24D11M2I24M14D20M33D29M2D11M8D21M1D29M5D3M1I26M1I14M2I14M1D42M5D24M1D21M17D9M9D16M23D13M40D13M29D7M5D28M1D34M4I29M1D28M28D51M11D21M12D25M2I16M2I29M4I20M13I25M3I11M4I24M2I30M1I5M3I35M14I11M5I12M2D39M1I9M1D25M1I16M6I13M7I6M30D29M1D293M11D6M3I10M5I9M2I18M58D21M9D34M15I34M2D17M2D4M4I26M2D11M6D91M1I37M1I156M1D43M1I14M17D17M 1516/2113 71.7% 2260/94230402 0.0% 620/2113 29.3% 129875208 60339347 +11746 chr4 + 190214555 182349990 182349989 182350276 287 TTTTCTTCATTTGAAATAACTGTGAATGAGGCTGTTTTTCCCAGAAAAAAAAAAATGTTATTCAACATTG--TAAAATTATGCAAGCAGAGTGCCTGATGTTCTAGCTACAATTTCAAAGAAGAATTTAGTCACTAAAAGGGATTAGATTCCATTTATTTATTGATAAAGAGGCCAACAGTTCAAGTTAAGAAGGTGCTAGAACTGCTGTGAGGCTAATGAAATTTTGATGGCCCGAGCCTCCCACAAGAGTAAGAGAACAT-------TCGGACCGTGTCACACAGCTCTCTGTT chr4 - 94230402 52473205 52473204 52473478 41756925 41756924 41757198 274 TTTATTTTGTGTGAGAGAAATCTGAATA----TGTT-----------AGAAAAAGCACTGCTCTGCAGTGGTTAAAATCATGCAA--AGAGTGTCTGATG--CTTGATACAACTTCAAAGAAGAGTTTAGTCACTAAAAAGGATTACAGTTGATTTATTTATTGATAGGAAGGCCGGCAGTCCAGCTTAAGGAGGTAGTAGGACTGCTGTGAGGCTAATGAAATTTTGATGGCTTGAAAGTCCCCTAGGGCTATGA-AACATGTATAACTCAGACCGTGT--CACAGGTCCCCGTT ...x:..::.x...:.x..x.x.....:----....-----------.:.....::::.::..x:..x..--......:......--......:......--..x.x.....:...........:..............:......x.x.:x...............:::.....::....:..:x.....:....:x...:...............................::..:xx....x:.:.:x..x..-.....-------..:........--.....x..:.:... 28M4D4M11D23M2I13M2D13M2D154M1D5M7I11M2D14M 207/265 78.1% 274/94230402 0.0% 31/265 11.7% 129876785 60337770 +11580 chr4 + 190214555 182354182 182354181 182354491 310 TGTGTTCTAAGTGTTTTTGTTAAAGTATAC-------AGAATATATGCCATCTCTGTTTCAATTCTAAATGTTCTTTTAGTTGTAGAGTTGAAATTAAAGTGAAGCATGCTATGAATGTACCAAAACTGATGATGTATGCTATTTTGATTTTTGAATGTGTTTTTGATATCCTTGAAAAA--TCACAGTGGTAGCAGTAAAATTGTTTTAATTAATGAATTGAATAGCAGT--GAGTGCTGAATCAGGTTTATTGATGTAATTATCACTGAAAT-------AGAAAAAATAAG--TGTTAGAGCCATAGAAC--CTTCGTTTATTTGCCATT chr4 - 94230402 52480865 52480864 52481190 41749213 41749212 41749538 326 TGTGTTCTGGATGTGCTTACACAAGAAAATCTGAAAGAGAAAACAGTTCTTTTTCATTTGAGTCGTAAGTGTG---TTAATTGTGAGGTAGCCATGAAAGCAAAGCATGCTTTGCACATCTATAAACTGATGATCTCTGCTGTTTTGATTTG-GAATGTTGTTTTGATGTCCTTGAAAAAAATCACAGTGGTAGCAGTAAA-TTGTTTTAATTAATGAATTAGAGAGCAACAGGATTGCTGAATCAGGTTTATTGATGTAATTACCATTGGAATAAAAAGGAGGAAAAACAAACTTGTCAGAGCTGTTAGATTGTTTCGTCTA-CTGTCATT ........:::...x:..::xx...x.x.:-------....x.:.xx:.x.:.:::...x.:.:x...:...x---...:....:::..x.xx..x....::.........x..x.::.x:xx...........x.x....:.........x-......xx.......:...........--...................-...................::.x....::--..x............................:..:..:...-------..:.....:..:--...:.....::.x::.:--:.....:..-:..:.... 30M7I36M3D76M1D27M2I19M1D29M2I41M7I12M2I17M2I9M1D8M 228/304 75.0% 326/94230402 0.0% 28/304 9.2% 129873317 60341238 +16242 chr4 + 190214555 182376186 182376185 182376615 430 TCAATATTGTAGAATACTGTAAGGGGAAAAAATAATTCTAACAGTTCTCCCCTGTGTTCCCATTAATTTGTTTATTATCCAGGTCTTCATTAGTAATATAGTTGCTAATGTAAGCCCATAATAAACAGAGTATAATTGAATTTTCAATATTTTGTCACCTGGGAGTAATTTTCTTCCAAGACCTCTGCTCCATCTTGTGACTAATTGTCGACAGTTACTCAGTGCCACCACATTAATGTCATCTAGCATTGCAAAAATA-TCTACCTGACTGCATTATATTTAAAGATAT-TCATTCCAAGCCCTTGATATTTTCT--TTTTAAATTATTTACCTCAAGTTTAAATATCATTTAAAATGCAATAAATGTAATGAGCCAACATG-----TTGTGAAAATACAGATTTAGACATCAGCTAAGATTTGTTTGGGTAGAAGAT chr4 - 94230402 52491060 52491059 52491476 41738927 41738926 41739343 417 TTAATATCAAAGAATACATCAAGGAGTAAAAAAGTTACTAA-AGCACTCCCCTGTGCTGCGATTAATTTGTATATTATCAAGGTCTTTATTATGAATGCAGTTCTTAATGTAGGTCTGTAATAAACAGAGTGTAATTGAATTTTCAATATTTTGCCACTAGGGAGTAATTTTCTTACAAGACCTCTGCTCCATCTTCTGGCTAATTGTCAGCAGTTACTCAGTATTACTGCATTAATGTCACCAAACAGTGAAAACAGAGCCTACCTGTTTCCCGTATGTACAGGGATGTGTAATTCCTGTTCTCATCTATTTACTGGCTCTGGGCTGTGTGCCTCATGGCTTGACCTTTTTTAA---------------------CAGCATGAAGATTTTTGAAAATATGACTGTGGACATGAGCATAAACTTGGGTTTGTATGAGGT .:.....::x.......xx:....:.x.....x:x.x....-..:x..........:.x.x..........x.......x.......:....xx...::....x:.......:.:.::.............:......................:...:x...............x....................x..:.........::............:::..::...........:.x.:..x..x...x.x.-:.......x:.x.xx...:.x:.::...:.-.x.....x:x:.::xxx.....x..--:.:.::::.:.x.:.....x.x:.x:.:x.:x.....---------------------..:....-----..x........:::x.x.:.....x...xx.:.:...xx.xx...x:..:. 41M1D217M1I30M1I25M2I37M21D7M5I51M 295/408 72.3% 417/94230402 0.0% 31/408 7.6% 129885126 60329429 +25036 chr4 + 190214555 182389985 182389984 182390554 570 CAGTAGATGACTCTTTAAAGGTCATTTTAGCAAGTGTAAGATAGATCTTTTGAGGGTGCACATAGCCCACCTCCCTCAGTTTGGTTTTCTGTTTCATTGACTGTATTAGCGTTAAACTTTTTAAGAGTGACAGGCTGCAGGAAGGGGATCCCGGGTGGGTCATGGGATCTGCACAGCCAGCTGTTCCTTAGTTCAGAGAGTTCTTCTTTTTGAGATTTACAGATCCGTTTGCATTTGACAGACCATGGCAAGTCTTTGTACTGCCCAGTCCCAGTGTTTTAAAGGAGAGCAGCTTAATAATTTATTAACTGCAACATTTCCTCTGGGCTTTATCTGTGTGATGCTGTTGAGTCACAGAACATTATAAATATGAAGAATTTAGCAGAATCACATTCTTTAAAAGAGCTATGGCCTTTTTGTTGTGGTGGTTGTTGTTGCCAAGGACTCCTCTGAGAGC-TCTTGTTGGTTTACCTGGTTGGAAAGCAGCAGAAAATGGTCAGCTTTGTAAAGTGGGATTGCAGTACCAGTTTCGAGTTTGCTAACAAGGTGCCCTGATCTACAAGATCGTTA chr4 - 94230402 52499308 52499307 52499842 41730561 41730560 41731095 535 CAGAAGGTGACTGCTTAAAGGTCATTTCCCAAAGCATAAGTCAGATTCTTTGGGGATGTA-----------TCCTTTAGCTTCATCTTATGTTTCATTGACTGTATAAGCATTAAACTCAGTGAGAATGACAGGCTGTAGTAAGTGGATCCCAGGTGGGCCTCGGGATCTGCAGAGCCAGCTGTTCCAGAGCGCAGATAACTCTT-----TCAGATTTGCAGATCCTTTTGCATTTGACGTGGCATGCCAAGTCTTTGTACTGCCCAGTGCTGATGTTTTAAAGGAGAATGGCTTAATAATTTATTAACTGTTACATTTCCTTTGGGCTTTATCTGTGTGATGCTG-TGAGTCACTGAGAAGTGTAAATACATAGAAGTTAACAGAAGCACATTCTTGAGGAAAGCCAAAGCTTTTTCTTTTT--TGACCGT-------GAGAATTCCACTGAGAATATGTTGTTGGTTTACCTACTTAGGAA--AGAAGAATGCATTCTGCTTTTTCAATCAGGGCTGAAACAT--GTTTTGTGTTTGTTAGC---GTGCCC---TCTTGAAGATAATTA ...x..:.....x:.............:xxx...::....x:....::....:..:..:.-----------...:.:..:..x:.:..x.................x...:.......:xx.:...:..........:..x...x.......:......:.x:..........x.............xx..:x....x.::....-----.x......:.......x............:x:x....x.....................x.:::..............:::....................:x.........:.......................-........x..:x.x.:......::x....x...:.....x.........x.::.:...:.x:..:....:x..x.--..:::..-------:..:.:...x......::-.x..............:x..:.:..--..x....x:::x..x.....x.x..x::..::..x.::.:--....:.x.....:..:.---......---...xx.....x:... 60M11D134M5D136M1D76M2D7M7D18M1I25M2D40M2D17M3D6M3D15M 408/534 76.4% 535/94230402 0.0% 37/534 6.9% 129890677 60323878 +39361 chr4 + 190214555 182394685 182394684 182395308 624 GAGAATCAAATTGATTTTTAATTATGAGTTCTTGATTTTAGCCTTCAGATAAACTAAATTGAACCAGAATATTCTTAAAGCATAAACAATGGATTGTCTAAATTCCCAG-CTCTCATTTCAAGTA-TTCGCTAATGTGGCATTGATCAATCTACAATTCCCAGACTGAGCAGAAGTGATAGGAATATTGGATAAAAAATGCCGTACAGGCCAGAAAGATAAATTGTTTGGGTTGTCTTTTTGCAAGTTTGAGGTCACGATTCATTCATCTTGTTACTTTGCTATATCCCTTTAGTGGCTTCAATTGCAGGATTAAATATTGAATGGTGGCAGATCATTCAATATATAGGCTCTCATAGTTTGGCATTAGAGGGCTTTTCATGCTTAGAATGGAGCTGTGTGCACACAGAATGCCAAAGATAATCGTGCTGATGATCTAGTCTGTGAGATTAATCCCTCAACAATATTATCAGACAATTCTTAACACATGGATTTGTCCCTGATATGACACTTCTGAAACAAATGG-------------ATATACTAAGCATTTTAGGA---------GTAACATTGAGCCTCCTATACA----GCCTGGCTTTTTCAGGAAATTAACCCATTAGGAGAT-TTGGCCAGAAAAGTCCAACACTT chr4 - 94230402 52504295 52504294 52504941 41725462 41725461 41726108 647 GAAAATTGAATTGATTTTTAATTAAGGAGTCTGTATTTTCCACTACAGATAAGCCAAATTGACCCAGAATATTCTTAAAGCATATGCAGTGGACTGTCTGAATTCCCAAACTGTCACCTCAGGTACTTTGCTAATATGGCATTGATCAATCTACAGATCCCAAACCGAGGAGCAGTGATAGGAGTATCGGCCGTTGGATGCTCTACAGGCCAGAAAGATAAATTGTTTGGGTTGTCTTTTTGCAAGTTTAAGGTCACAATTCATTCATCTTGTTACTTTGCTGTATCCCTTTAGTGCCTTCAATTGCAGGATTAAATATTGAATGGTGGCAGATCATTCAATATAT-GGCTCTTATACTTTGGCATTAGAAGGCTTTTCATGCTTAAAATGGAGCTGTGTGCACACAGAATGCCAAAGGTAATCGTGCTGATGATCTGTTCTGTAAGATTAATCCCACAACAGCATTATCAGGCAATTCTTAACACATCGATTTATCCCTGATATGACACTTCTGAAACAAATGGGTAAATGCTTGGCATATACTAAGCATTTGAGGAGGGAAAAGTGTGGAATTGAACCCTCTACAGAAAAGATCCATATTT-----AAAATTAACCCAGTAGAAGCTCTCAGTGAGGAGAATTTCAAACTT ..:...::................x.::x...xx.....xxx..x.......:.:.......x.....................x:..:....:.....:........:-..x...::...:...-..:......:...................:x.....:..:...x..x..........:...:..x::xx::....:x..............................................:.......:........................:.............x.................................................-......:...x............:...............:...............................:..................:x.....:...........x.....::........:...............x.....:..............................-------------...............x....---------..::x.....:..::...:.x.----::.::xx...-----:...........x...:..x.-.::.:x..:.:.:.::x.x.... 109M1I15M1I220M1D178M13I20M9I22M4I10M5D21M1I23M 525/618 85.0% 647/94230402 0.0% 35/618 5.7% 129890390 60324165 +17124 chr4 + 190214555 182400921 182400920 182401604 684 AAGGCATTGCCAGCTTCAAGATTTGACTTTTGATAAATATAAATGTGGAGCAACCCCGTGCTGCTGGTGCGTAGTGGATGTGATCCATGACGGGCAGATGGCTGTAGCGATGGAGAGAAATATTATAGCCAGAACATTCCTGCTTCTGCTCCACTGGACTCAGAATACATTAACAGGGTCCTCTCTCAGCTTGG--------AGTTTTTTTCCCGATGATGGATTAGTGATAAACTCATATGCAGG-TTATTCCGGAGTTCCTCTGA-AACCTTAGCTTTTCATGAATGAAAAGGTCCTTTATACATTTTCTACAT-------CCTTTAATTTTTTTCCCATGGAACTAGATTGCTTTGTACAAATTTATATCTCTGT-------TATCTTC----TTTGAAATAATAGAGAGCAGTTGTCCAGTTTTA-ATGCCTTAATTATTTGTTTGGTGGTTTGGAGAAACTTTACTGTTCCTTAATGAAATACATTACATTT-AGTAAAGAGAGAACTTAAAAGTTGAAATTATTCTTTA--------AAATACAAGCTAAGATTCTCATGAAGCCAGAAGTCTCCTTGCTCATTTCGTCCTAAATGACTTTTGATATAAGGCCAAACTTTGTGCCAGATGTGTGGTATTTTACAATAATTACATGGCACAAACCTCCAGTCATTTCCA-CTGAGACCATTCAACATCTGTTTTATCAAAATGGCTTT chr4 - 94230402 52508012 52508011 52508666 41721737 41721736 41722391 655 AAAGCATCGCTGGCCTGGAAGTTTGACTTCTGGTCTATATAAATGTGAACC----------TGTTGATAAGCAATGTTTGTGACCCGTGACGGGCAGCGTGCTGTTCTGATGGAGCGAATTATTACAGCAAGGGCATGCAGGCTTCTGCTCCACTGGACTTGGAATAGATTAGCAAAGTACTCTCCCAGCTCAAAGGGTTTTAGTTTTTTTCCTCATGATGGATTATAGATAAACTCATATGCAAGTTTATTGCAAGGTTCCTCTGAGAACCCTAGATTTT-ATGCATGGAAAGGTCATTTATAAATGTTCAACATTGTTTTCTTTTTATTATTTTCCCCATAGGACAAGATTGTTCTGT-----------TTTCTGTAAGAGACTAAATTCAGATTTTATAACCACATAGA-------TCCAGAGCTGCACACATTAGTTGGTT-TTAGATAGCT---GAAGACTCTGTGGT------GAAAAATGTATTTGATTTCAGCTCCTAGAGGTCTC-----TTTTATTCATACTTTACAACCCTCAAACGAGAGTACAGACTTTATGGAAGCCAGAAGTCTTC----------AATTCTAAGTTA---TTGATGGAAGGCCAATCTT--TGCCATGCATGTGGTTTTCTATA--------ATGGTACAAACTTCCAAGCGCTTATGTCTGATAATGTTCGATATTT-CTTTATTGGAGTGGCTTT ..:....:..::..:.x:.::........:..:.xx...........:.x.----------..:..:.:x.:.:..xx.....:..:..........xxx.....xx:.......x...x.....:...x..::...x.xx...................::.....x....:..::..x.....:.....:::--------...........:x...........xx................:.-.....x.:::..........-....:...x....-...x...:.......x......x..x...x....-------::....x.x....:.....:.:..x......:.:...-----------.:.....-------..xx...----...:x..:x.:.x...-------.....xx:.:-.::.x...:..:x..-..x.:.:.:.---::.:...:.::x..------:x:....::...xx....-..:xxxx....:x..:-----..xx.x.:..x.....--------...::x:..:xx...:.:.xxx..............:.----------x:.:....:.x.---.....:x........x...--.....x:::......x..:..:.--------....:......:....:x.::..x::-....x.x::...:.:..:.-:.....:::.:....... 51M10D133M8I44M1I20M1I13M1D34M7I37M11D7M7I7M4I16M7D10M1I15M1D10M3D14M6D18M1I16M5D16M8I38M10D12M3D19M2D23M8D26M1I19M1D18M 439/616 71.3% 655/94230402 0.0% 107/616 17.4% 129892909 60321646 +10288 chr4 + 190214555 182414930 182414929 182415316 387 CACAGTAAAACAATTTTCAGCTCTTCAGTTGATTTCACTTGTGCTACTTCGCTAGTTTTCAACCTTCGTTATTGTGTTGTCTAAACTGGTGGGTAAATTTTCCACCTTGAACACTAATAGGTGACACACTGTTAATCAGCATACCATTTCGAAATATCTTAATGCCCATTAAGTCTATTTTTTTCCAGAAGCCTATAGATTTCAGA--TGGCCTTT------------AACAGGAGGGAG------AAGAAAGGGCAGCTTTTCCTTGCTTCTTTAGCTGTGCTTTCTGACCACAGCGGTTTTCAAGCCTCATGGCACATTTGAATGCTTGGTTGTGTCATCATTCTGGCACTGTTATCTTTGATTCCAAAAGAGAATG-TAGCATTTCAAATGTCGGAAATGTGCTA chr4 - 94230402 52514762 52514761 52515158 41715245 41715244 41715641 397 CATTGTGAAACAATCTGCTGCCTGTCAACTCATTTCTTTCATGTCATTTCATTCAATTTAAACCT--GTT-TGACGTTGTCCGAGTTAACAAGTTATTCTTTTCTGTTCAGCACCTACTGGTGGCAACCCATAAATCAACGTCTCATCCGGAAACATGAAAGGCCTCATTAAATCTATTTTTGT--GTGAGTTAACAGATCTCCAAATTAACCTTTCTTTAAAAATAAAATAAAATGAAATACGGTAGTAGAGGTCAGCCTTTTCGTAC------AGCAGAGCTTGCTGACCACAGAGATTTTCAAGCATGATGGCACATTTGACTGCACGGTTGTCTCATCATTTTGGCAGTGATCTGTTTGAAGCCAGCAAGGAATGCTAAGGCTCTAAATGTCTGAAATGTGTTA ..:x..:.......:.x.x..::x...::.x.....x:.::..::.:...::.x:x...x.....--...-.x::......::.::.:::::..x.x.:..::x:x..x.:...:x.:x....:..xx.::.x.....:.:.x:...::x....:..xxx.:xx.:......:.........x.--:x:..::x.:....:..x:.--.::.....------------..:.::.x.:.:------.:x.:...x....:...:.x.:.------...x.x....x..........x.:.........x.x.............x...x:......x........:.....x..x.x.x.....xx...:x.::.....-..:x::.::.......x........:.. 65M2D3M1D113M2D20M2I8M12I12M6I23M6D104M1I28M 246/376 65.4% 397/94230402 0.0% 32/376 8.5% 129900168 60314387 +12983 chr4 + 190214555 182416191 182416190 182416683 493 ATCCATAATATGT-TTTTATTTTCAACAGCTGCTTAATGTGTTATTCAAGTTGAGTTGAGGTATGGTTAAGCTTAGTGATATAAAACCTTCTGAGACATCTAGGAATGTGATATTTCTGACCAGCTGCAAAAATGGTAACCTCTTAGAAACAAATGAGCATAATAAAACAAAAAGTAGGCAGTGAGTGTATTAATCTTTTTTCTTCCTTGTGTTTTTCCTCTCATATTGCTTTCTTAAAAAAAAAAAGAAACCTTTAATAGAGCTCTAACCTTTAAAAGTTCTTTGAGTCAAGCA-ATTTTTCATGATCAAGCTGTCTCATGATTGTTTTTATTTCAGTTTAACATTTCTTTTGATTCACTACATTTTTTTAAGGTATTTATGAGATTTTACTC-----CAGAGTTCAACTGAGGTTAATAACTCGTGATTT-----------AAATAAAGTCATT-GAATATCTGCATGTGACCAAGTCAGT-------ACCACTCTTGGGGTCACAATTGGCTTCCC chr4 - 94230402 52517192 52517191 52517660 41712743 41712742 41713211 469 ACCTATAATGTCTACCTCATTTCCAGCAATTGCCTG-TAGGCTATTCT-GTCA----GAGGCGTAGTTAGAATAATTGATATAAAACCCTTTGCACTGGGGAGGAATGTGATACTTCTGACTATCCAC-AAAATGGTAGCCTTACAGTAAT-AATGAAATGACTAAAAAGGAAA--AGGTACTCAGTGTATTAATCTCT----TTCTCTGTGTTTTTTTTCTTTT-------------------------ACCTGTAACAGAGCTCTAACCTTTAAGTGTTCTCTGAGTTGAACATTTTTTTTATGATCCAGCTGTCTAAGGATTG-TTTTACTTCA-CTTAATATTTCTTTTGATTCACTGGA----CTTGAGCTGTTTGTGGGATTTAACTCATGTGCTAGGTGCAA--GGGGTTAATAAATCATTATTTGAGTACATATAAAATGATGTCAGTAGAATGAATGAATGTGACCTAATTAGGAAAAAAAAAAAATCTTAAGGCCAC---TGGCTTTTC .:.:.....:.x.-::.:....:..:..::...:.:-.:x.:.....x-..::----....::.:....::x.x.x............:.:..x:x::xxx............:.......:.x.::.-.........:...:x:..x..:-.....:xxx.x.....x::...--...:.x.x.............:.----...::.........::...:x.-------------------------....x...:.................:x.....:.....::.:..-x.....:......x........x.x.....-.....:....-:....:.................:x.----:..:..x.:...:..:.....x....-----.x::..x...--.:.........x..:.x....-----------....:.x....x.-....:xx..x........x.:.:..x-------.xx.x....::..:...---......::. 13M1I22M1D11M1D4M4D71M1D22M1D22M2D23M4D22M25D45M1I30M1D10M1D26M4D26M5I10M2D21M11I13M1I26M7I17M3D9M 325/443 73.4% 469/94230402 0.0% 76/443 17.2% 129898999 60315556 +11915 chr4 + 190214555 182425189 182425188 182425616 428 AAGCAACAGTTTTAAATAATTTGGGTGATTATGTTGGACTCCATTATAGTCTCTGGAGCAATATGTTCATTATTTTTATTTCTCCAAAAAAAGTCAAACAACAACCCAAATTGTTCTGGTTGCTTAAGACAATGACTGGAAGCATTTGTATTTCCTATATATCCTAAATGCTGAGATCTGGTCTAACTCATATTAACCTCCTCTGTAAGGATCACAAATCTTCAGATAATCTCCTGTATCTTAGTAATTTATTTTCTGTCAAACATATAAAACAAATCATGTTAAAACATTCCATTA--AAAAGGGAGGGGCTTGG--AGGAAATTTTTCCGTTGTAGTATGTGCTGCCTTTTC----TGGAGTTC---CTGATG-AAACACAGATGTTTCAAAAGTGCCCACAAGGATGGTTAGCCATGATCAGATTGATCCCTGGTTA chr4 - 94230402 52522187 52522186 52522606 41707797 41707796 41708216 420 AGGCACCAGCATGACATCATTAAGGTTGTATTCTGGAGTTGAACTGCAGTCCCAGAAGTAATAATAAAAGGGGTTGTTTTTTTTCAAGGAA-GTC---CAACAAATAAAATTGTGCTATAATCTTAAGACAATGACTGACGGCATTTGTATTACTTACATATCCTAAACCCTGATGTTC--CCTGACTCACATTAACCTCTTGCACAAGGATCACAAGTCTTCAGAGGATCTCTTATATCTAAGTAATTTACTTTCTGTCAAACATATAAAACAAATCTCAGTAATACTTGCCGCTAGGGGAGAGAAGCAACTTGGACAGGAAATCTCT-TATCATGGCCTGCCCTGCAGTTTCACTGTTCAGATCAGACAGATGTGAAAACCCTTGTTTCAAAA---CTCA----------TAACTATGGCTAGACCAGTTCTTGGTTA .:...x...:x.x.x..x...x:...x:.xx.x.x.:::.xx.:.::....:.x.:..:....xxxxx.xx:x..x.x...:.:...::..-...---......x:x.......x..:xxxx................:x:...........x.:..:..........:x....x:.::--:..:.....:.........:.x:::...........:........x:.....:.:.....x.........:..........................x::x...x..x.x..::..--::.::.:..x::.....--.......:.:.-::.::.:.:x..:x....xx....----.xx..x..---.x....-:..x..xxx..........---.:..----------..:.:...:::...::::.:.:...... 91M1D3M3D81M2D116M2I17M2I11M1D24M4I8M3I6M1I19M3D4M10D28M 279/408 68.4% 420/94230402 0.0% 32/408 7.8% 129903002 60311553 +9178 chr4 + 190214555 182427732 182427731 182428016 285 ATACTGCTGAATTTTTATATTAAGAGGCTTTGGCTGAAGGAATTCAGACACATACACAGTATGGACCCAGAAATCTTGCCAAGAAAAGTTGAGTTGAAAATGTAGGGGAACTGATCCAAGAATAGGCCTTAAACATGTTGCATCCATTACTCGCAGCTGTGTACATGAGAAGTGACTTTTTATCCCACCTCCCAAAACCCTATCCA--GCA--CTGTCACTTTTTTTTTTTTTTGCCAACTTGCTGACCTTTCTGTTCCCACAAAAGGAAAATGTGATTATTTAAAACA chr4 - 94230402 52523993 52523992 52524264 41706139 41706138 41706410 272 ACAGTGCCAGACTCTCATATTGAAAAGTTTTGGCTGAAATA-CTGGGACATATAGATAATATGGTCGCAGAAAACTTGCCAAGGAAATTGGAGTCTGAAGTGCA-GAAAACTG-TCCAAGACCAGGCCTCAGACATGCTGCATTCATTACAAGCAGCTGTGTGCATAAGGAATATTTCTTTATGCCA-----CACAACCCAAGCCACTGCAGGCTGTCAC--TGTCATTTTCATACCAAATAGCTGGCATTTTAA-----GAAAACGGAAAGCATG--TAGCTAAAACA .:.x...:::.:.:.:.....:.:.:.:..........:x.-:.x:....:...x.:.:.....x.x......x.........:...x.x....:x:..:..:.-.::.....-.......x:......:.:.....:.....:......xx..........:...:..:.:.:x:.:.....x...-----..x.....x.x...--...--.......--.x.:x....:x.:....x.x....:.x...:x:-----:x...x.....:::..--..x:....... 41M1D62M1D8M1D73M5D14M2I3M2I7M2D33M5D16M2D11M 193/268 72.0% 272/94230402 0.0% 21/268 7.8% 129903739 60310816 +3694 chr4 + 190214555 182442763 182442762 182442815 53 TGTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACAT chr4 - 94230402 70982629 70982628 70982681 23247722 23247721 23247774 53 TGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACAT ...........:...............x::.:x:........:...:...... 53M 44/53 83.0% 53/94230402 0.0% 0/53 0.0% 111460134 78754421 +3404 chr4 + 190214555 182442764 182442763 182442876 113 GTGTGTGTGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACA chr4 - 94230402 73121101 73121100 73121213 21109190 21109189 21109302 113 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA .....::..::.:.x::....:..:.:::::x:x.::..x...:....::...x:..:..:x:.....:::x::.:.:...x....:.x....x.x.......:::.:.x:.. 113M 64/113 56.6% 113/94230402 0.0% 0/113 0.0% 109321663 80892892 +3234 chr4 + 190214555 182442771 182442770 182442831 61 TGTGTGTGTGTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATAT chr4 - 94230402 32959568 32959567 32959628 61270775 61270774 61270835 61 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATATATTCAT .....::x.:.....:x....x.....::...:.........:.....:.x.:....x:.. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 149483203 40731352 +3609 chr4 + 190214555 182442780 182442779 182442873 94 GTACATATGTGTGTGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACAC chr4 - 94230402 14964794 14964793 14964884 79265519 79265518 79265609 91 GTGCATTTATATAGAGGTGT---TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ..:...x.:.:.:x:x....---...:x.:...x....:.x.:.:.:.::.:..:.::..::.....:.xx........::............. 20M3D71M 61/91 67.0% 91/94230402 0.0% 3/91 3.3% 167477986 22736569 +4652 chr4 + 190214555 182442793 182442792 182442866 74 TGTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:.....::...x....:...x.......:...:.x.....xx...:.:.............x..... 74M 60/74 81.1% 74/94230402 0.0% 0/74 0.0% 174047004 16167551 +3022 chr4 + 190214555 182442794 182442793 182442856 63 GTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACA chr4 - 94230402 47095164 47095163 47095226 47135177 47135176 47135239 63 GTGTGCGTGTGTGTGTACACACATACATGTACATAAACTGATTCATGTGTATGCATATACACA .....:......:.:......:...:..::.:...x.:xx..x...:::...::.:.:..... 63M 43/63 68.3% 63/94230402 0.0% 0/63 0.0% 135347630 54866925 +3469 chr4 + 190214555 182442794 182442793 182442886 93 GTGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATA--TACAC--------------ACACACACACACACACACACACACACACATATATA chr4 - 94230402 73121101 73121100 73121209 21109194 21109193 21109302 109 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .....::..::...x:.:...:.....:...x.x::..:x:.......:....--.....--------------...:.:.x.:..:.x....x.x........:.... 53M2I5M14I35M 67/93 72.0% 109/94230402 0.0% 16/93 17.2% 109321693 80892862 +3509 chr4 + 190214555 182442795 182442794 182442868 74 TGTGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:...:.::.:.x.:..:...x:.:....:..:::x:.:.:xx...:...............x..... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 174047006 16167549 +4137 chr4 + 190214555 182442797 182442796 182442870 74 TGTGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .......:.:.:.:..:.x.:..:..:x..:....::..:.x.....xx...................x..... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 174047008 16167547 +3631 chr4 + 190214555 182442799 182442798 182442872 74 TGTGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACA chr4 - 94230402 8395789 8395788 8395862 85834541 85834540 85834614 74 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .........:.:::....x.:..::..x..:...::..:::x:.:..xx.:.................x..... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 174047010 16167545 +3583 chr4 + 190214555 182442801 182442800 182442882 82 TGTGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACACACATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA .....:...::::::...x.:.::...x..:.:..::..:.x..:..xx.:.................x.....x.::x... 82M 55/82 67.1% 82/94230402 0.0% 0/82 0.0% 174047012 16167543 +3489 chr4 + 190214555 182442803 182442802 182442886 84 TGTATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACACACATATATA chr4 - 94230402 8395789 8395788 8395870 85834533 85834532 85834614 82 TGTGTGTATGTGTGCATAAACATGTATTTACATATGTA--TGCCTACATTAATACACACACACACACACAGACACAAATGAATA ...:.:..::::.::...x....:...x......::..--.::x....:xx.:.................x.....x..:x... 38M2D44M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 174047014 16167541 +3346 chr4 + 190214555 182442805 182442804 182442875 71 TATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACAC chr4 - 94230402 14964814 14964813 14964884 79265519 79265518 79265589 71 TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:x.....x....:.x::::.:.::...::::..::........xx........::............. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 167477991 22736564 +3403 chr4 + 190214555 182442806 182442805 182442888 83 ATATACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACACACATATATATA chr4 - 94230402 8395788 8395787 8395870 85834533 85834532 85834615 83 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATA ..:.::::..:.:.::.:.x.:..:..:x......::...::x:...:xx.:.................x.....x..:x... 83M 54/83 65.1% 83/94230402 0.0% 0/83 0.0% 174047018 16167537 +3341 chr4 + 190214555 182442810 182442809 182442876 67 ACACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACA chr4 - 94230402 7596413 7596412 7596479 86633924 86633923 86633990 67 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA .:...x..::.....x..:....:.:...::...:......x...:.:..x:..:...:...:.x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 174846397 15368158 +3340 chr4 + 190214555 182442812 182442811 182442877 66 ACATATATATACATATATATACATACATACATATATACACACACACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...:.x....::x.:::.:.:..:..:.::..:....:...xx........::............. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 167477993 22736562 +11456 chr4 + 190214555 182450080 182450079 182450345 266 GTGCCTTAAGATGGTGTAG----TTGAAGATTTGATCCCCTTCCACTAAAG-TGGAAATACTTTCAGTAATTGAAAGCAGATTCACGTCTGGAGTTGTACAAGCCAAGGTTTT-CATTTTTAAAATAAACCTTTTGTTCTCTGGTTTTAAATGTTTCAGAGAGCCATCCAAAGACCTCTGTGTGCTAATTGTTAAAGTAGTACTTAAGAAAGGATT---GCAAATACCCAGAGAAGGCATTTAAGAAATCAGCTAACTTAACTAAGCCTCCCTCT chr4 - 94230402 52535930 52535929 52536200 41694203 41694202 41694473 271 gTGCCTGGAGGTGGTGCGGCAGCTGGAGGGTTCGAGCCTTTCTCGCTCCGGCTGAAAATACTTGGGGTAATTGAAAGCAGATTCACGTCTGGAGTTGCGCGAGCCAAGGTTTTTCGTTTTTAAAATAAACCTTTTGTTCCCCAGCTTTAAATGTCTGAGGGAGCCGTCCGGAGACCCCGGGTTGTTAATTGCTAGAGTAGACTTGAAGGAAGGAGTGGGGGAAAAACCTGAGCAAGGTATGTCGG----CAGTTAAGTTTATTTACCGTTCCGCT ......x:..:.....::.----.x..:.:..:..x..::.::.:..xx:.-..:........xx:...............................::.:............-.:.......................:.::.:.........:.x..:.....:...::.....:.x.xx..:......:..:.....xx:.x...:.....x.---.x...x...::::x....:..x.x:.----...:...x..x.:.x.x.x.:..x.. 19M4I28M1I61M1I102M3I26M4D26M 193/262 73.7% 271/94230402 0.0% 13/262 5.0% 129914150 60300405 +38203 chr4 + 190214555 182453636 182453635 182454637 1002 GTGGAAGTTTCAGTGAGTTGTTTTCATCCTGGTTTGTGCACAGTGCCTTTTTTTCCTTAACCTTAAACTGCAGGGAGAGATGGGGCCTGCTGTCTAGAGACCTGTAAAATGTAATCTGGATCTCTTTTTATGCCTTTTCTTTTAAATAAAACAAAATTACCTTATATAACAAGTTTAACATTGTTAACCTTTTATAATTATCTAACCATTATTTCATTTTACCTCCTGCTTCAAAGTTGTAACCTTTTATAATTATTTAACCATTATTTCATTTTACCTTCTGCTTCAAAGTTGTACATTAGCGGAGTAGACACCTGGCTGAGCTCTTAAAAGTTTATTTGGCTTTCAATTCCTGTGATAGTAGGGGGCAGTACATCTCCTTAATTATCTTTGTTCAGGGAAATGCTGAAAGGCCAGGGTAGTTAAACAAGGCCATTTGGATTTG---TGAGGTCGAAGTCAGATGCAAGGAAAGTGGTTAAATGCATTATCATCTTATTGAGCCCATCATCAGTAAAGTGACCTTGATGGAGGTGGAAAAAGCCATTTGGCTATTTTATGACAGCCAC--CCCTGCTTGTTTTATCATT--TACACATTTTTACATATGGCTTTATCA-TATTCTTTCTTTTCGTTTTCAAATATTATTTCCTC-TGATTGTAGATCGTCAGAATGAAGGTGAAAATTAAAATTAGTTTCTTTTTAATGATAGTTAGAGTTT---CTTTCATAAGTGTGTTTCATACATCGATTTATATGGAAATACCCCTTCATTAAAAATGAAGGTGATCAGGTTA--GCTAACCATTCTGTATTTGCTTTTAAGGGTCTTTTAATGATGATGATTAGTCTTTTTGCAAAGAAGCTGCAATTCTGCTACTTTTCAAACTGTTTTTAAGCTAGTAAGAGGAAAGACTTGCCAAC-CTCGATTTTAGCAGTGGGAATAATGTTTGTTTTAACAAGTGCCTAAGTATGTTTACTTGAAAGTTATTCAAGTTTTAGTAGTTCTATTGC chr4 - 94230402 52539964 52539963 52540898 41689505 41689504 41690439 935 GCAGAAATTTC--TGAGTTGTT--------AATTTTTGCAGAAGG--GTTTTCCTCTCAGTCAGAAACGGCACTAAAGAAAAGG--CTGTTGTCCAGGGAGTTATTAAAAGTAGGCTGGAAAGCCTTTTATGCTCTGTCTTTTAAATAAAACGGGCTTGCCTTATGTAACAAAGTTAAGTTCGTTAACCTTTTATAATTATTTAACCATTATTTCATTTTACCCCCTGCTCAAATGTTATA-------------------------------------------------------CATTAATGCAATAGACACCTGGCTGCGCTCTTAAAAGTTTATTTGTCTTTCAATTCCTGTGATAGTAGGGGGCAGTATATCTCCTTAATTATCTTTGTTCAGGGAAATGTTGAAAGGCCAGGGTAGTTAAACAAGGCCGTTTGGATTTGCAATAAGGTCGAAGTCGGATGCAAGGAAAGTGGTTAAATGCATTATCATCTTATTGAGCACATCATCAGTAAAGTGACCTTGATGGAGGTGGAAAAAGCCATTTGGCGATTTTATGACAGCCACCTCTCTGCTGCCGTTATCCCTGCCAGAGAGTACTTCAAATAGCGCTATCGCCATCTCCTCTTGTTGCTTTGAAATCTGATTTTTTCTTAATTACAGAGAATGAGTTAGAGGCTGAAAATGGAAATGGGCT--TTTCTGACAGTGGCGAATTTTTATACTTTGGAACTTATCCTTCAG--CTTGGATGACACAGAAATATCTC-----TAAATATTGAAGTGACC---TTAATGTTGATTATTATACATCTGCCTTTAAGAATCTCTGAATGATGATCATAGCTTTTTGCTCATGCAAGGTTTTATTTTGCTGCTTTTTAGACTTGTCCTAAGTTGATAGGAGGACAGGCAAGCCAACTTTCAGCCCTAGCAGCAGGATCGCTATTTGTTTTAACGTTTGCCTATTTATGTTT-TTACAAAGATACTGAAACCATGGGAGGCCTGTGGC .::...:....--.........--------::...x....x.:x.--x....:::..:.::.xx....x...xx:.:::.x:..--...:....:..:..x:.:.x...x...:x.....xxx.:........::.x...............:::x..:......:......:x....xx.:...................:.....................:......:x..x...:..-------------------------------------------------------.....::.x.:..............x...................x...............................:...............................:............................:..........---.:...........:..........................................x...............................................x................--.:.....xx:x.....x:.--:.x.x.x.x:.x..x..:..x:....:-:..::::....x.:.:...x....x.x....::..-.:...::...xx:.x..xxx..:.x.......x:....x:.:.--...:.:.:::.:.:x.:xx...---....x:x.xx.:.x:....x--x.:.:x.x.:.::......:.:.-----....x..x:.:....:.---...--.:.:.::...x.::..:...:......::...:.x.........x..x:x.:...x:x..x:x...x.x:x...:....:.....:.:...xx.::....:.::..:.....x..:.xx......-:..:::::......::...x::x.:...........:xx......xx.......-:.xx....x..:.x..:::x.:.x..x:..:.x.. 11M2D9M8D15M2D37M2D155M55D149M3I121M2I19M2I27M1I35M1I43M2D22M3I20M2D23M5D17M3D3M2I125M1I54M1D35M 684/920 74.3% 935/94230402 0.0% 97/920 10.5% 129913672 60300883 +4580 chr4 + 190214555 182478152 182478151 182478233 82 CTTTTGTAATTGAGGTAATAATCCTCATTTGTAGTGTTGAAAATATTATTTTCATACTACTCTCATTCTTTAAAAATAAACA chr4 - 94230402 52557641 52557640 52557722 41672681 41672680 41672762 82 CTTTTGAAATGGAAGTAATATTCCTCATTTGCGATGTTAAAAATATTATTTTTGGCATAGCTACATTCTTTATAAATAAACA ......x...x..:......x..........:::....:.............::xxx..x::x.........x......... 82M 64/82 78.0% 82/94230402 0.0% 0/82 0.0% 129920511 60294044 +18345 chr4 + 190214555 182479334 182479333 182479933 600 TTTTATATTAACTTACCTTTTTATTTATTTTAT--TTTAATATAAATAAATTCATGAA-TTTGACGATTATAAATATATTTATTATAGTCAGCCCATCATCCCCAGAACACTGCA-GCCTAAACTCAGGCTTATGAGTACTTAATTACTAAATTGGAAAGTG-TAGCATCTTGTTAAAACAGCAAGGCTTATGATATCGAATGTGTAATTTTGAAGAAATGAGGAATGCCATTTGTTTTTATTAAGCTGGGATTTGAGTGTTTGAAGAAAGCATTGAGGGAGGCATTTCTTTAGAAACTGAAGTAATAATCCTCATTTGTAGTGTTGAAAATACTATTTTTACAGTACTCTGACTCTTTATAAATAACCATAGG-----------------------------------ATCTACTGATAAATTGTTTTT-----TGTCATTTTCCATTCTATGGAGAATTCTACGTAACTTCAAAATTAGAAGTAAATATTTTTGATCTCTTAATGGAGTATAATTTTCTTGTGAGGGAAAACCCAATATATATTGATTTAGGATTTCTGAGATATA-AGAACCTTTTTTATGAT------ATTGATATTCTGTAAAAACAAATAAACGGATGGAATTATAAAGTCTTTTTCCCTGAAGTG chr4 - 94230402 52557359 52557358 52557990 41672413 41672412 41673044 632 TTTAATATCTACT-GCTGTTATGCCTTTTTTATGCTTCAA---AAGCAAGGTCTTGAAACTTCAGAGttataaatatatttattaaattCA-CCCA-CGTCTGTGGAAAAATAGATGTCTGATTTCTGGCACATGAATGCATAATTGTGGGATTTCAAAGTGCTTGTATCTTGTTAGAAAAGCAAGTCTTTGGATATCAAATATGCAATTTTGAAGAAATGAGGGATGCCATTTGTTTTTATTAAGCTGGGATTTGAATGTTTGAAGGAAGCATTGGGGGAGGCATTTCTTTTGAAATGGAAGTAATATTCCTCATTTGCGATGTTAAAAATATTATTTTTGGCATAGCTACATTCTTTATAAATAAACATAGGGATCTGTGCCTTAAAGAAATATGCTTATTTTCCATGTCTACTTACAACTTTTTTTTACTACTATTATTTTCACTTTAACAAGGGTTTCTGCCTAACAGCAGAAGTGAAGTTGAATG-TAGAGCTCTCTGGATGTGCCATTAGTTCTGTGTGATGGAAATGCCAGCATATG--GGTTAAAGAATGTTGATGTGTAGAGAATGCTGTGTTTAATTTATCAATTAGTATGTCGTAAG-----------GAAAGCAATTAAGAGATGTTTTTTTTTAAGGTG ...x....:x...-:.:x..x.:::.x......--..:..---..::..:x..x....-:..x.x::..................x.x...-....-.:..:x::...x.x.:x.-.:..:.x:..x...x:....:.:.x.....::x::...xx......-.x.:.........:..x......x...xx......:...:..:..................:................................:.........:........:...............x....:x.........x..........:::....:......:.......:xx:..x::xx.:.............x......-----------------------------------:......x.:..x..x.....-----.:.:......xx..:x.::::.:x....:.x....xx..:..x.::.:x.:...:-.xxx.x.....x:...x:x:..x.x..::x.....x.....xx...::....:--.:..x.:..x.x:...x:.:..-....:x:.x.x.x.:..------...::...x::....:-----------.:.x.x.....x:.::.x.....:::.:.:... 13M1D19M2I5M3D15M1I32M1D4M1D18M1I46M1I211M35I21M5I55M1D53M2D22M1I17M6I16M11D33M 411/580 70.9% 632/94230402 0.0% 72/580 12.4% 129921975 60292580 +8838 chr4 + 190214555 182489517 182489516 182489715 199 CATGTGTAAAATATTTAGACTTTAATAGAAAGAAAAACCAACCTGTATTGAGTTA---------TAAAAACACCATACTGTTGAAATGATTGATGGTTTTCTCATCACATGTAACAGACTAACATAATTTCATGAAACCTTTGCTTAC-CGCTTACAAATTATCCAAA-ATTCTTTTGCAGTAAAGCTAACAGTATG------TGCTCCTTAAGCA chr4 - 94230402 52573831 52573830 52574046 41656357 41656356 41656572 216 CATATATAAAATATTCATACTTTAATAGAAAATAAAACCGGTCTGTATTGAGTTAAGCTGTGAATGCGGACACCGGGCTGCAGAAATGATTGATGGTTTTCTTACCACATGTAATAGCCTAACAGGATTTCACAAAACCTTTGTTCGCACTCTTAAAAATTACCGGAACATTTTGTTAAAGAGCAGATAGTAAAATGTTGAACTGCTGCTTCAGTA ...:.:.........:.x.............:x......:::.............---------.:x::.....:x:...:x....................:.:.........:..x......x:......::.........:.::.-.x....x......:.x:..-...:.x..:x..x:x..x..::.:x...------....x...x..:. 55M9I84M1I19M1I28M6I13M 150/199 75.4% 216/94230402 0.0% 17/199 8.5% 129915686 60298869 +3501 chr4 + 190214555 182489731 182489730 182489827 97 CTTTTCTTTTCTCCTCTTTCTTCCTTACTCCTTCCCTTCCCTCCTTATTCCTTCCATTCCCCTCTCCTCCTCTCGCCCTGTTCCTTCCCTCCCTCCC chr4 - 94230402 75886281 75886280 75886377 18344026 18344025 18344122 97 CTTTACCCTTCTCCTCTTTCCACTTGGAGGCTCCCATTTCCTACTTGCTATTTTCCTTCCCTGTTCCCTCTCTCCTCTTCCTCCTCCCTTTCCACTC ....x.::............:x.:.x:xxx..:..x..:...x...::.x:..:.x.....:x:...::.....x:.:.x:....:..:.:..x.:. 97M 61/97 62.9% 97/94230402 0.0% 0/97 0.0% 106603450 83611105 +74643 chr4 + 190214555 182492266 182492265 182496796 4531 CCTGAAATGATTTAAAAATCTGGCAGACTGCAAAGTTATCC-TGATAAGGAACTTGGTTTTGATTACAGTAATGAGATATACGGGATGGTGTCA-GAAACTGTCTTCCAGTTGACACAATAATCCATAATTTATAGATTGGCTTAAAAATTAAAAGACAAAGTCAATTATAACTAATTATGATGCTACATTTGCTCGAGGAGTTACTATATCCTTTGGG-ATAAAGGAAGTAATATTCATGTCAGTCAGGAA--TCTTTAGCTACAGTTTCCTGGTTCTATCTTAA---GAATTTTTCAGTTTCGTTTCATGAGAATCCTAAGCCACTGAAAGCCTGAAACCCTGCTATTTTTAGAAATACTG--TAGTAGCTTCTGTGTATCACTGCACATTTGTTCCTATTCTGAACTTCTTATCTGTGCCAAATCTTCAGAGAGGTTACTGGAAGTTTTGCTCGATGACTGCTGAATCAGTCAGAAGTGA-ATTTTAAATTATGCAGGAGAAAATAACAATAAACTGAGT-TACAGCATCAAGATATCATTGTTATTTCTGTTGATACTGGTTTCATCACTTGATAGGATTTAAATACCCAGACTATTGCATATTTACTAAAGTTTTATTTCATCATGTCAACATTTTTTTTTTTTTACAGTCAAAAGCCAAATTGTCAGCAAAGGATATTACAAGGATAGGTATTTTTAGCATCTTTTCAA------------GAAGTGAAA-----GGAAGGAGTGGTTTA--TATTTTTCTATAATTTTATGCCATGAGACGTGACAATTTTCCATCTTA-AGAAGGACAATTAGTT--CTTAGAAGG---------AAAGAAAAATGCATTCTTATATAAACTTCCTAGAAAATTTAGTGAGTTGATAAATTCCTAGCTGCATATCAACTTTCTACTCTTGTGGCCTTCTTTTGTGTGAGCTTTGATCATCAAGCAGTTTCTAAGTGTTTTTGAAGCACATGTGTTGCAT----GTGTGGAGCAGGCCA-----------CAGTGCATATATGTAGCATGGGCTTCTTCCAGAA----AAAAAGCATTCTGAGAGTACCATTGAGGG----AATAT------------GTATTCAAAGGAGACAAGCT--GCAATAAACTAGTTGTTTAAGTAATATTATAAATTGTTATCCTTTTTAGATATTTAGGATTTCATTTTGTTGGAAAGCTTTCAAAGGGTGACCCAGTACGTGTGCCAATGACAAAAGCTCCTTGGAACAATTCAGAGCATGCTTTATGCCTTATGAAATGGGATTGTAAAAATCCTCTCAAAAATGACATCCAAAATAGCATTAAAACACAATTTCCTTT-GATAAGGCTTTACGGCACTCATATGAAAAGTGATACCACTTTGAGTGAGACTGTGTCAGCATTATGTGATGTTGTGTTGCTCATAACTGACACTAATCCATTAAGGGTGTGAGGGTCATTTATTTTTCTTATGAAGTCATTAAATACAGTTATTGATTTCTGTTCAGTTA----GATTGTACCTTCATTTAATGATCGCTATATACATTAATGCTAAGACTTGATTTCATGCACTTTAAACAAATAGATATTGTATTTGGAGTTTAAAATAAAGTTAATGACAATTATTAAAAAGAAATTGTCATTGATTCACTAACCCAAGATCATGTTGACCTAGAACTGTAAAAATAATATTG----GTTTTTTAAAAATTTAT--AACCATCTTCAGTGTA---------TTTGCTAAATAGAACAGATGACTTTTATTTCTTAAATTAATAAAGTAAAATTAATAAAACTAGTATGCAGGTCTATGTAGTATTCCCCTCTTACTGCTACTGTTTTTATAACTAGTTGTATTATTTTCTGCTGATTTGCAGATGGGTTTCGTGCATTTTCTAATTTCCTATTTTTTGCCAAGTAAATGAAAA-----AAG------AGTAAATA-----------CCTAACCAAAATCCTTTTTCTTGAGTGTGTTAAGCAAGAAACTGGGAAAGGAAAATGAAAAGACATC--------AGTGTATGAT-ATTCTGT--TCTGGAA-------ACGTAGATG-AATATTACTAGGGACCAGATG-TGTTTTGGTATATACAGTAGTCCCCCCTGATCACTTTTGGCAGTTTCAGTTACCCATG---------GTAAACCACGGTTTGAAAATAAAGTGCATACAGTACAGTGAGGTACTTTGTGAGAGAGAAACCACATTCACATAACTTTTGTTA-GTTATACTGTTATAATTGTTCTATTTTATTACTGGTTATTGTTGTTCATCTCTTACTGCCTAATTTATAAATCAAACCTTTCCTAGGTGTATTTAAGGACAAAGCAAGTATATATAGCGTTCAGTTTCAGGTATCCACTGGGGGTCTTGGAAGGTATTTCTTGCAAATAAGGGGCGACTAATGTAATCTATTTTATATTAAATTGCTTGTTTAATTGGAATCATGCAGAATTGATGTTTCTGTACATTCCCTTGAAATAATTTTGTCAAAAGAAACAGCAGT--------------ATAAAGACTTCTGTAAT-TTCAGATTTCTGTCATTTATTAAGACCAGTCATTTTTTCCCTGATTGAATATATTATATTTGTGTTTTACTCGAAGGTAT----------------GCCTTAATAGTACCAGGAACTTCTAA--ACTTTCATAGTT----TGGCAATGTTT-------------TAAATTATTTCTT---------TTAC--CTATCCTTTTGGAATTTGATGCAGAAATTATTGGTCTATGCAATAGTGAGATGACGTTTATTAGATCACCTTTCACATGGGAAGTACTATTGGAGGTCTTTAGCCTCTAGTGCAGTAGCACCAAGTGGTACCAAGTTCATTACAGCAGCATCTTTGGAGATGTTGTATGCTCAGCACTTT-TTCATAGGCATCTTGCCTGGCT-CATTGAAGGAAACCTGGGCAAGGCTGTGATATTAATGAATTATGACAAGCCTTTTGCCTGTCAAGCAGAG--GTTCCCGCCTTCCTCCTT-TAAGACAAAAACTTAATGGAAGATGCTCAGATGCGCGAGCTCTCTGATGATACCCCTTAAGTGCTCTTCTCTTTCTGATGCGAATATTCAGAGAGCCGTGAAGCTGCAAGTGGCAGCA---TTTAATATTGCCTTTCTCATAATGCCTGAATAATTTTCCAGAGACTGATCTCTGCAGCTGCTGTGAACATGGTTATTTGTTTATTTTTCACCTTGGTCCTGGTGGAATGCTGACCTAGCCAATCTTCAGGACTCA---CAGGGAAAATGGTTTCAGATTCATAGCTCTCATCTTTTCTTTCAAATAAACACAAAACTGAAGCTTGTGACGTTGAGTAACAGAAAAATAAGAGGGACTGTTTCTTTAGTTTCCTTTAAAAGTGAAAAAAAAAATGACTGTATGAATGAAGAATTTATTTGGTGAAAAATGAAGACTCTCTTGCATATTTTTAATGGATATTTGTGAGAGGAAAGGAGAAAGCATAGGCTGTTGTGGTAAG--CTAT-AGAATGTTTTCAAGATTTCCCCCCGTAGT---GCTGCTCATTATGTTAAACAGTCTAGCTTTTA----GCTACTGTAGTTTTCGTTTTATGTGTATTGGCCTTCATTTGCTGAAATGCTTCAAGTTCACAGTACTAAAGTCATTTTGAAAACGGGATGTAATTACAAAGGTATCTTATGCTTACCAACAGCTTTTTTGGATCAATTTAATTATCATTACTTGTGGATACTGTAAATTGAATATCCCGTCCCTAATTACATTAAACTCAGGGGTTAGCTGCTTAAACGTCTAAATGAGAAAAGTTCATCCTTTGCTATAAATAGGAGAATTGTTCTCTTATTTAGACTGACCTTGGAAGCTAAGCATTTTACATGATATTGTCAGGTGAGCATTATAAAGACAGCCTGTAATGAGATCTGTAATGAGGAACTAAGGTATAGTAGCCCTTT-GAAAAGTTAATTTATTCAGCATTTTCTTATTGCATGATAGAATTAAAGTTTGTGTATATGTCCGGACCCCTTTTTAAAGGGGCCAGTCTCACTGTTCTTGGTTTACTCATATTCTGCCAGTAGTTTGAAGTGGGTTAGTATTACTATTCCACCTTAATGGAAGTCACCATTAAAGTAGTGAATTCATCTTGCCCTTT-TAAACAGAGC------------TAATTTATTTAGGGAGTAGGAATGTTATT---TTCCCTACCTTCTCCTCACTTCCTTT--TACAGAAATGATATATCAGAATTTATTCAA-ACCACTTTAAGCA---------TACAT------------------------TTTCCTGAGAGGAAAAAAAAAATGCCTTTAGACATCAATAAACTGGAACGGCATTTCCCTGTTCTG------GAAAATCAGCCTTTAATTAGTTGATGTGTGTGTCTTGGGTTAGTATTTGTTGTCTGTTCAGCTCAAGTGATTTTTGTGCTTTAT--------------AAGAAAACGGATTGTTCTGGTGGGAGATTTGATTGATTTCTGCTTGTTATAGTCATTGTAAATTTTAGTGCCATGCATAGCTACTTGCTTTTATTTACTTTGTTTTCTTTGTCAATTGTAGCTTCATTAAAAATCTCTTATCTGTTCACAGTGGAAAC--TCTTAAAAATGTAAG-CGTAACTACTTATTTCCATAGAACAGCTCCTGCTGAGTGTGCTTTACGATTTATCATAAAAACCTGT-----AAGGACAAATTGAGGCTGGATGTGCTAG chr4 - 94230402 52575410 52575409 52579706 41650697 41650696 41654993 4297 CCAGGGCTGCTGTACAAATGAGGTAGACTGAGGGGTAACAAATGATATTGAGTGCAGGGAAGATCACTGTAACGAGATAAACAGTGTGGTGTCACAAAATTGTCTCCCAGTTGACAAAACAATCCATATTTTATAGATTGCCTTAAAAATTGAAGGATGGAGTCAATTATAGCCAATTATGATGCTGCATTTACTGGAGGAGTTTTCATGTCCTTTGGGGAGGAATAAGGAAATGCTCAAGTCAGTCAGAAAAAGCTTTTGCGTTTGCTTCCTCCTTTTATCTGAGCGTGAGACTTCCTGCTTCTTCAGGTGGAAACTATATGT-----GAAACCTGGGACAGACTTATCTGGAGGAAGAAGACTTTGTAGCTCTTTCGTTTTCCTGCATGTTC------AGCCTGAAATTATGATA---GATAATATGGCAGATAGAACAATGAA---CTTG---AATGCCCGC------AGTCCTTAGTGATATTCGAGCTTGCTCAGTGGGAA-----------CTGTGCATGCAGC---------------------CTGGTGATGGTAGCCTGCTTACACAGTA-----------------------CATACTGGCA-----------TCTTCAACTCAAC-------TTCCTTCCCAAAAAAGAGCCTTCGTGTCCTCCA-GGAGATAGCTAG--TAGATGCT----GTATATTTCCACATGTAGCCTGCTGAAGTAAAAATAAAGGAAGGAGAGCGTGGAGCAGTTTTCTGTGAC------CCATGA------------TTCCTTATTGGAGAACAGCAAAAAAATGGAATAGAAAGCAGTGTACTGAAGATGAACAGATACCCATAT------TCTTGAAGAT-------GGTAATAGCCTGTGGGGTAGTTGTTTTTTTTCT--TTGTGCAGCATTGTTTCATTTGGGAT--AATCCACCTGCCCTTTCTA-----TTCTGAGGC-TGGGTGGTGTACTGGAGGGCTGCGCATCCCATGGATCTCATGCTGTACAACTGAGTGTGAGGAATAACATCCCAAGCCTGAAAAGGCATTCCATTGGTGGTATTAAAGATTCAGATATATAGTTATTGGGGTATTTAGAGGGGAAGCACTTAACAGTAAACAAGTTG----AGTAGTGTTTCCAAGTGTTATCCTTCT---GTGTTCAGGATTTCATTTTACCAGCTAGCTT-CAGAGGGTGACCTAGTACATGTGCCAATGACAAAAGCTACTTGTAACAATTCAGATCATGCTTTCTGCTTCATGAAATGGGATTGTAAAAATCCTCTCAAAAACGACATCTGAAATAGCATTAAAACACAATTTCCTTTTGATAAGGTTTTAAGGTACTCATATGAAAAGTGACACTGCTTTGAGTGGCTCTGTGTCAGCATTATGCAATGT---GTTGCACACGAGTGACGTTAATCCATTAAGGGTGTGAGGGTCACTTATTTTTCTTGTGAAGTCATTAAACACCTTTATTGATTTCTGTTCAATCACTTGTGTTCTGCTGGCATGCAGCAATCTCTAGACATGCTAATA---------------GTGCTGTTGCTAATAATGGTTATAGA--CCGGAGTTTTAAAGACAGATATTA-----CGTTCAAAATAAATTATCATG-----CCTAAGTGAAGCACAAAGGAACTTAGGG------AAGCAATACTGCTCTGCTGTTTGCAAATTGCCTGAACCTGCTTTATTGCAGAAGAAGATTTTG-----TGACACAGATG--------TTCTAAAATCAATAA-------TTAGTCA----------------TTTTCAGTG-----CCTTTGCTGCT----TTTTCTAAACATACCACGTCAGTTTAT----ATTTTTGGACTGCTTCTGT-TATGTGATGATCGAGCAACTTTGAGAAATTGAATGCAAATTTAGAAGCTCTGTAATAATTAAGTTTAAGGTTTGTAACACCAGTTTTTCTGCAGGAGTCTGTT------TAAACCCCGGACTGTAAATGCTTTGCCTTTTACTTGCTCGTACAGGATTATTTTGTCATCTGAAGCAGTGTTGCGTACATGCAATGTGAGT-GGGACCAAATGCTGTCAGAGTACAT-------TTCTTCTTCACTCCCTCTTACTGGATCTGTTCATCATGAAGAAATATGTAAAACGCAATT---AAATAGAATGGGT------CATTTTAGCTCCATATGAATGATGCACAGTAGACAAAAAAAATATATAAAGGCATGCTCTGCT--TTTCCCTACTTTAATGC--------------CATC-CTAATGACTTTATCT-----TGACACTTTGTCTAAGCTTGTTTCCTTTCCAAACAGATAACTGCAAT-TGCAGTTTACATTATTC-CTA-----CTTAGAAGG----------AAATGAGG-------------------TTTGAGATGAATTTAGGATATGATTGAAG------AGTTGTGATGTCTCTGTTAATTT--TTGCGATAATCT--------GATGTTGTAGTTGGTGCTTTTTTACCTCATCTCCTCTGTTTTGTTTGGGGTTTTTTGTTTTGTT-----------TTTTTTCCCCCCTTGGATATAA-------GTAGTTTAGCAGAGTAAATTGTCAGCTTCATCCTGGGCATAACAAAAGCAGGCGAGTGCAGTTATCTCTATAGCTGAGATGGGAAGTTCTCGCTTGCAGGCAGTGAGTTCTGTCCTGCTGAGGAATTACTGCTTTCTTTGTGGGTCTTTCTGCTGGCTCTTCGGGTCCTGACA-------GGTTACGTCAAACAG-----------CACGGGTCACCCTATC--------TCAGGCACCAG----GCAAAGCCAAGTAGCAGTGAGTCTATTGCACTGGCTCCAGAGAAGCTGGTGTTTGCTCAATGTTTCCTTTGTAGCCCGGTTGCCTGATTTCATTGAAGGAAAGCAGAGCGAGGCTACCCTGCTAATGAATTATGACAAGCCTTTTGCCTATCAGGCAGAGAGGCTCCTGCTTATCTCCTCCTAAGACAAAAACTTAATGGAAGATGCTCAGACAGGCAAGCTCTCTGATGATCCTCCTCAAGTGCATGCCCTGCTCGGCTGCCAGCACGCAGAGAGCTGGGAAGCTGCAAGTGGCAGCAGCGTTTAATGCCGCCTCTCTCATAACGCCTGAATAATCTCCCAGAGAGAAATTGCTATAGCTGCTGCGAACGTGGCTGTTTGTTTATTTTTCACCTTGGTCCTGGCGGATTGCTGACCTAGCTAATCTGCCACACGCGGGGCGGGGAGAGGCGAGGAGGAGACGT------------TTCT-----------ACATCCCCAGGGCCGGTGTCGTC------------------------------------CTCCTCGACAAGT--------------CGGGATCTGTGCAGGCTGCCTGAGGGGATCCACG-------CCATGCCGGGCGCACATGGCCAGCTCTGAGGGGGAAGGAGGTGGCCTGGGCTGCCTGGGTGAGTGCTGTGAGGCTGTTTGTCA----TCTCCCCGCGGTCTCACGGCTCGTTATGTTGAACGGCACAGCTTCTAAACTGCCAAAGCTTCTTTGCTTTTATGTGCTGTGGCCTTCATTTGCTGGAATGCCTCAAGTTCACGGTGCGCCGGTCGTTTTGAAAACGGGATGTAATTACAAAGGTTTCTTATGCTTACCAGCAGCTTTTTTCAACCAGTGTAATCATCATTACTTGTGGATACTGTAAATTGAATATCCCCTCCCTAATTACATTAAACTCAAGGGTTGGCTGCTTAAACAGCCAAATAAGAAAAGTTCACTCTTTACTATAAATAGCAAAATTGTTCCTTTACTTCTGCTGACCTTTAAAGCTAAGCGCTTTGCACAATGTCGTCAGGTGTACATTAGAAAGATGGCTTGTAATTAGATCTGTAATGAGGAACTAAGTTGGAATAGCTTTCTGGAAAACTTCATTTATTCAGCGTTTCCTAATGGTGCAGCAGAATTGAAGCTTTGCTGTGTGCCAGGACTC----TGGATGGGGCCGG-----CTGCC---------CTCGTGCCCCACCTGCAATGGGAGGAGGAGGA---------------------GGCAGTGCCT------GTAATGGGTTGGCCCTGCCCTTTGCACACAGTGCAGGGTTGAGGAACAATTTATCTAGCAGTCACGGACTTTCTTGGGTTAATTAATGTTTCTCCTCTCACTTCAGTAGACAAATGATGAGTTAATTTTTAGTAAGCAGCAGAATAAAGAGAGGGTGGCTGCATGATTTTTTTTTTTCTGTTTTCTTCTTTCCTCTGATTAACGTGAGAA--ACTGTTGTCAT------GCTGAAATGTAAGTTGTCTTTTCTGGTGGGAGAAGACAGAGCTTAAATTAGTTGTCGTGTCTGCCTTGCTTCAA-ATCTGCTGCCTGTCAGGGTTTCACCCATTCTGTGCATTGTTTTCTCAGCGCTCAAAGAA----------TTTAGTGAGGAACTTGATTGATTTCCACTTCC-----TTGCGGTAACTTTTCACAT----CTTAGCTACCGGCTAATATCTAC--TGTTTTCTTC----ATTCTACTTTAATTAAAATTCCTTCATTTATTCCCTGTAGAAGCTTTTTTTTTTTTGTAAGACGTGACTACTTATTTTCCCAGAGCACTTCCTGCTGAGTGTCCCTTATAATTTATCATAAAAACGTGCTTGGATGGGACAAATGGAAGAAGTGTGTCTCAG 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41M1I52M1I124M1I32M2I32M3I35M5D34M2I29M6D17M3D26M3D4M3D9M6D12M1I22M11D6M1I6M21D28M23D10M11D13M7D33M1D12M2D8M4D12M12I9M5I15M2I14M6D6M12D10M1I16M2I9M9I22M6D10M7D33M2D26M2D19M5D9M1D12M4I15M11I34M4I29M4I5M12I20M2I15M4D27M3D31M1D139M1I72M3D95M4I39M15D26M2D24M5D21M5D28M6D11M4I17M2I16M9I4M5D11M8D15M7D7M16D9M5D11M4D27M4D19M1D39M5I3M6I8M11I31M6D30M8I10M1I7M2I7M7I9M1I9M1D11M1I13M7D38M9I13M3D13M6D49M1I13M2D17M14D4M1D15M5D47M1D17M1D3M5D9M10D8M19D29M6D23M2D12M8D11M14I17M1I21M11D22M7D19M16I26M2I12M4I11M13I13M9I4M2I42M7D15M11D16M8D11M4D66M1I22M1I70M2I18M1I118M3I135M3I24M12D4M11D23M36D13M14D34M7D63M2I4M1I13M4D12M3I32M4I381M1I69M4D13M5D5M9D32M21D10M6D23M1I10M12I29M3I26M2I30M1I13M9I5M24I22M2D11M6D25M6I43M1D40M14I5M10D32M5D19M4D23M2D10M4D44M2I15M1I67M5I28M 2690/3982 67.6% 4297/94230402 0.0% 864/3982 21.7% 129916856 60297699 +11921 chr4 + 190214555 182508774 182508773 182509002 229 GACTTTCAATTAAGCTTTCCAGCTTCCTACCTGTGTTCTTGTATTGGTTTCTTAGGCAGGAATATTTTCTCTGCATGGACAGAAACAGTTGATAAACTCAACTCCAACAGAGAAATAAATTACATGCCAGCTATAATGAGATATGAACGTCCAGTAAATTTTCTTTTGCATGTAAAAATGTGGCAGTATGAAGTAAGAGTCAATAATTATTTATTGTTAATTCCCTAAT chr4 - 94230402 52589253 52589252 52589474 41640929 41640928 41641150 222 GATTTTCATTTAAGCTTTCCAGCTTCCTGCCTGTGGTGTTCTATTTGTTTCAGAGGTAGAAACATTTTCTCCACATGGGCAAA----GCTGATAAGTTCTGTTCCAGCAGAGAAATAAATTACATGCTAGATGTAATGAGACATCAATGTCCAGTAAATGTCCTGTTGCTTGTGAGAGTGGTGCTGTGTGAGACAACAGTTGATA---ATTTTCTGGTAATTCTCTAAT ..:.....x...................:......x.x..x....x.....xx...:..:..:........::.....:..:.----.:......::..x::....:....................:..x.:........:..x..:...........x.:..x....x...:.:.:..xx..x..:...:::..x...::...---....x:..x......:..... 83M4D118M3D21M 172/222 77.5% 222/94230402 0.0% 7/222 3.2% 129919521 60295034 +3027 chr4 + 190214555 182517338 182517337 182517402 65 CTGTAGTCTGTTATTTGGTTTAAAAAAAAACAAAGTTCATTCTTTTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 36012527 36012526 36012591 58217812 58217811 58217876 65 CTGAAGCATAATATATAGTTGAACACGAAACAGACTTCACTCTTTTTTTTTTATTATTCTTTTTG ...x..:x.:x...x.:...x..x.x:.....:.x....:............x..x..:...... 65M 48/65 73.8% 65/94230402 0.0% 0/65 0.0% 146504811 43709744 +17380 chr4 + 190214555 182520956 182520955 182521614 659 AAATCTCCAAGTTCAAATATATGTCAGACTGATGTGCTCCTTCTGTACATAGATAATAACTTTATTCAGAAGCCTGTTAAAGATGGCTTTCATTTTTTATTTCAGATTTGCATCAGAAAGGTAATGACAGCTCATTAGCCCTTGAAGC-ATCTAAAACTTAGAAAATATATTTCACAATTCAAGGTTAAATGGGTCATCATCAGTTATGAAAGG-----------------AAGTATCATGCACTCTGTAGAATG----------TTTCACATATTTCAAAGT-GTTATCTTTACAGGGAAACACGTCACCATTCTTCTTCAGAGAAGCAACTTGATGAT------AGGAAGATCTATC--CCATCTTATCCTTTCATATATT----TATC--AAGATTTGGCTATGTAGACTTTTCCTGAGGGAAGTC-TCACACTGACTTTAGTAGTTGTCTTTGGTACTAAAACATTAGATGAAAAGGATTGTAC-AGTTATAAATTATCATGCTTTGTTTGTGCTTTTGGAACAATGCTTTTTCATACTGCAATATTTGCATGTAGAGTTTTAATTAAGAGATAACTGTCTCCACAGGTTGGCTGCAGAAGGCT-GCAATCTCCAGCAGGGAGATAAATGCCAGTGCCAAGTCATACAGGTTGGGTAGCAAATGGGGGGGTCG----CTAAGATA---AAATGGGCTTGAAATTAAAA chr4 - 94230402 52592028 52592027 52592707 41637696 41637695 41638375 680 AATTTTGTGAGTTAAAATGTGTGTCAAAACAGTGCACCTCTTTTCTT--TAGACA-TAACTTTTCAAGGATGCCTGGGAAAAGTGGACATCATCTGT-ATTTAAGATTTGCATCTGAAATGTAGTGATGGTTGGTTAGTATTCAGAGAGATTTAGAACTTGGGGAGTGCACTTTCCAATTCAGGGTTTAAAGGTTCACTATCTGTTGTGTAAAACTAAACCAAAACCAATTAAATGGAAAACCCACAGTAGACTGCATGCATAGTTTTCAGGCATTTTAAAGCAGttat---taaaaataaat---------------ttaaaaaaatCACTGAAATGATTTTTGAAGGTAGGTCTATAAACAAACTTCTATGTGTATATGTTCTTGTATTGGAAAGGCTGTCTATGCATATATTCCCTTGGGCAGATCATCACAATAACAACAATTGTTGACTCTAGTATAAG-----TAGATAAGAAGAACTGTGTTGGTTATAAATAATCATTCTTTGTGTGT---TATGCCACAACAATTTTCAGTA--GCTCTTTTTGCATGTAGAGTTTTAATTAAGAGATAACTGTCACTGCAGGTTGACTACAGAAGGCTTGCAGTATCCAGCAGAGAGATAAATGCCAATGCCAAGTCATACAGGTTGGGTAGCATACGGGGAGTCCAGAATTAAAAATAAATAAACAGGTTTACAATTAAAA ..x.:.x::....x....:.:.....:.x:::..::.::...:.x.x--....:.-.......x:xx:..x.....xx...::...x:x....:.x.-....x...........x....x...:...::.:.x:....:x:.:::..x-..:..:.....:.::.:.::.:..:x.......:....x..x..x...::...x...:..x..::-----------------..:.:xx.x:.x.x.x.....x..----------.....x::....:....:-.....---..x.::x...:---------------..x.:.:..x..x:xx:.....------...x..:.....x--.x.x...x.x:x.x:....:..----...:--..::x:..x.....:.x.:x..:...x:..x.::..-.....x.:..xx:.:.x....x..:.:...:x.:-----.....:.:...:.:...::-:.........x.....x......x...---.x..xx....::x....:x:..--..xx.x...................................x.::.......:..:.........-...:.x........:.............:..........................x.:....:.x:.:----:x..:...---...::..:..:x........ 47M2D6M1D41M1D50M1I65M17I24M10I18M1I5M3D11M15D22M6I13M2I22M4I4M2I36M1I34M5D19M1I27M3D22M2D65M1I68M4I8M3I20M 438/627 69.9% 680/94230402 0.0% 85/627 13.6% 129928928 60285627 +8285 chr4 + 190214555 182547409 182547408 182547853 445 AAATAAAATAGTGAGCCTGTATACTTTCACTTGTATAGTGTCCTAGCCCATATTTTAATTTTTTAGTTTTTCCCTTTGTTTTCTTTCATGTCAGCTTCTTCATCTGGTCCATCAGTTATTGAACATATTACGTCACCTCCGCC-CCATCCCATCTTCATGACAATCAGAGGAGGTTGCTAAGTGCTAGTTTCATCCAGGCCATTTTGTGGC-------CAAACGCTAAGCACACTACCAGTTC-TATCCAATGCTCACTCACTGGTGCAGTTTCCATTTGAGTCCAGCCCTATAGAAAGAAGATGACAGCTTTCGGTTTTCATAGTTTGACTAAACTATCTTTTTGTGTCATGT--------------AAGGAACCAAAA-------------TCATATTTTAAACTTGCTCCTTGATAGCTCCTTATTTAAAATTTT-CTGGGAATGTTTTATCACTACAGATATTAAGGCATGGAGAAGA chr4 - 94230402 52599454 52599453 52599899 41630504 41630503 41630949 446 AAAAAAAAGAATTGGTTTGT-------TGTTCATGTCATATCTTGACCCATTTTTTAAATTTTT----TTTCCATAGGTCCTCC--CATGCCATCCTCCTCATCTAGTCCATCAGTTACTGAACATTTACACTCCCCTCCTCCATCACCCAATCTCCATGACAACCAGAGGTGGTTATTAAGTAATAATGCCAGCCA-GCCAGTTCAGGACTCTGATACAGATGAGGACTATACTGCCAGCTCATTTCTAGT----ACAGACCGGTACTGTTTCAGTGTCTGTCCCAGGTCATGGTAAGAAGAGGAC-GCTT----TGTCCATAGTTTGAATACCCTTTTATTTTCCATCCTCTTATAACATTGCCTAATGaaattaaaatatctaaataattttatattttaaa--------ttGAT-----TTTACTTGAAATTTTGCAAATGATGTCTCTACTTCAAAAGTACTGTAGCATAAGCAAGA ...x....x.:.x:.::...-------:::.::.:.x:.:..:.::.....x......x.....----.....x.xx..::..:--....:..x.:..:......:............:.......x.xxxx..x.....x..-:..:..x....:........:......x....::.....:x..:.x:..x...-....x..::x.:.-------..:.:.xx:.x:.:...:....:..-.x..:.:.----..xx..:...:.x.....x:.x.xx....x:xx::..:.x.......x...-....----.x.:..........x..xx..x.:x....x::..x.x.--------------.x.:..::....-------------.:..........--------.....-----:...:..:.......-.x::x:....:.:xx.x::.x.::..:.:x:....:::x.... 20M7D37M4D16M2D57M1I53M1D13M7I25M1I8M4D51M1D4M4D38M14I12M13I12M8D5M5D15M1I43M 274/409 67.0% 446/94230402 0.0% 73/409 17.8% 129947955 60266600 +3082 chr4 + 190214555 182548658 182548657 182548697 40 CACCACTTCTCAGCCTTTTGGCTAAGATCAAGTGTAGTGT chr4 - 94230402 56292880 56292879 56292919 37937484 37937483 37937523 40 CATTGCTTCTCGTCCTTTTGGCTAAGATCAAGTGTAGTGT ..:::......:x........................... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 126255778 63958777 +29419 chr4 + 190214555 182555923 182555922 182556502 580 AAACACTGAAGAGTTTCTCTAAAAGAATAACTTCCCAGGTCCTAATGCTTAATGCAGGAAGTAATATTAGTACTTTTTTTGTTGTTTAGTCTCTTTCTCTGACCAAATATGCCACCAACTTGAGTCTCATTGTCCCTAGCCCATTAGGAACA-ATAGAAGTTTTACCCCACTTCCCAGCCCTTTTCTTAGGAATGTAGGAATCTGGCTAGAAGGCACAACAACCTCCCACCTTCCTAGTAGACCAAGGATTCCTGTTGTCAGATGCAGTGGGCATGAAAGCAGCAATTTTACAGCACAAAAACTCCAATAACATTTACTTCGGTTGGCTGAGATTGCAATGCACACAGGCACTGCTCATTCTTGGTTGCTTAAGCACCAGCTAGCTTCCCTTGGCTTTTTGCCACTTTGTGCATTTC--AGAGACAAGTCCTTTCAGGAGAAAGCATTTTGCTTGTAACTTGCAGTGGAGTAAACAGACCATTCAGGCATAGTTTATTGCATTACAAACTCAACTATGCGAACTATCCCAAAATTGAATACAACAAAGTAATTAGTGAAATCATTTGGTCATGAGAATTCATA chr4 - 94230402 52609136 52609135 52609679 41620724 41620723 41621267 544 AAAAGCTTCAGGACTGTCCTTAAAGAATAATTCCTCTGCTCTTA-TACTTCCCATAGAAAAGG-------------CTTCTCCATTTAGTATCTTTCTGTATCTGGACATAGCATTGACATGAATTTCTTTGTCACTAACCCATTAGGAGTACGCAGAAGTAGTAACCC-----------TTCTTTTTAAGGATGTAGAGATCTGACTATAAGGCACATCAGCCTTCCTTTCTCATCTAAGGCCAAGGATTCCTATTGTCAGATGCAGTGGGCATGAAAGCAGCAATTTTACAGCACAAAAACTCCAATAACATTTACTGCGGTTGGCTGAGATTGCAATGCACACAGGCACTGCTCAGTCTTGGTTGCTTAAGCACC----AGCTTCCCCTGGCTTTTTGCCAGCTTGTGCATTCCAAAGAGACAAGTCCTTTAAGTGGAAAGAGTTTTTCTTGTAACTTGCTGTGGGGTAAACAGACCATTCAGGCATAGTTTATTGCATTACATACTTGACTATG----------CATAGTGGAATGTAGCAAAGTAATTGGTAGAATTTTTTAATCATTAGAATTCATA ...x:..xx..:::.x::..x.........:.:.:.x.x..:..-.:...xx:::..:..:x:-------------:..:x:::......x.......x.:x.:::.:..:x..:::..x...:.:..x.....x...:..........::.-::......xx..x...-----------:.:..:...:.:......::.....:...x........x..:...:..x:::..x.xxx..:............:................................................................x......................................x...................----........:.............x:.........:.--...............x..x:.....x:....x............x....:.....................................x...::......----------..x.:.x....::.:..........:..::...:x...::....x.......... 44M1D18M13D76M1I16M11D198M4D35M2I99M10D55M 429/541 79.3% 544/94230402 0.0% 42/541 7.8% 129946787 60267768 +19230 chr4 + 190214555 182558081 182558080 182559067 987 AAATGGCATCTGAGGTAATCGTGAGTTTCTGGGTTACTTTGCAGTGGTTTGCCCTCGATGGAGTGCACAAGAG-GAAAGAATGGGAATAGCCCTG-----CCCTGCCAGTGCGTGCCTGTA----------GCGAAAACGCTTGGAAAACAAGTGATGCACTCCTAATGAATTGTGCTTTTGGTTCTTTGAATGTGCACAGCATCTCCATCAGGTTTTTACAGCTGGACTCTAGCTGTAATTGCTACTGGGATGAGATGCACAACATGGGGTGTTGAAGCTAAGAATTTGTAGT-GTTTTAGTGGCC-----------AAAAATACATGGCATGGTAGGAGCATCAGGCCTCATGAAATTCACACTTGTATATCTTCATGTTCCTCACCCGTTTCTGACATGCCGCTGATTTGCCAACAGGCTACTCTAGATGAAGGGGATAAAA-------ATGGCAAAGCTGAAAGATGTTGTTTCTTA--------AAAGATACTGTGTATCAG--TGGAGTAAGAGGAAGTAGATTGGGGATATAA----------ATGCATAAAAAGGCCTCTGTAGTCATTCTTCAGTGAAGACAATTGGTATTAATCTCATCAATGCAACAAAACAAAAAAGATAACAATTTTAATCTTATTATAGCACAAA--------ATGGCATGCATTAAAGTATTTCTCCTAATGTAAACAATAATTCTATATTTCTGTAGCATCAGCTCTCAGATCCCTTGTCCTGATTTGTCATTAGATATAAATCAGTTTTTATGCTTCTTCCAGAGAAGCTTTAAAGCC-------TAATGTTTCCTTATTGGAGATGTTATAATTCCAAAGAGGGTAAAATTGATAGTTTCACAGAGAAAAGTATCCTATCCAAAATTATGATGTAAAAGAATAATCCAAATGCCCATGCTGATCCACCCTTATGGTTATTTAAGGTAT--AATCAGTGAGGCTTGGAATTTAATGCAATTCC-------------------------------------ATTGGCATCATAATTTTCCAGGGTGTCA-GCTGTGACCACTGAGTTCCCAACCCAGTTAAATTATTCTTT chr4 - 94230402 52610495 52610494 52611529 41618874 41618873 41619908 1035 AGACAGCATCAGTGGTAATCTTGAGTTTCTGGGTAACTTTGTGGAGGGTTGCTGTCTACTGAGTGGGGGGGAAAGCAAGAACAGGGCTGACTTTGTACCTCCCTCCCTCTGCATGCTTGTACTGGAGGCAAGTGAAAGCACT-GGAAAGCAAGTGAAGCACTTCTAATGAATAGTGCTTTTGATTCTCTGAATCTGCACAGTAACTCCATTGGGTTTTGACAGCTGGACACTTGCTGTAATTGCTGCTGGGATGAGATGTGCAACATAGAGTTTTGGAGCTAAGTACTTAACTTGGTTTCATTGGCCAAACTATATAGAAAACTATATAGCAATGTAGAAGCTATAGACTTGATGAAATTCACACTTGTGTAGCTTAACTTCCTTCAGCTGTTTCTGATGTAT------------------CCACTCTAGATGGAGGTGATAAAAAAAAAAGAAAGAAAAGCTGAAAA--GCAACTTCTTAAAGCAATGAAAGCAATGGTGTATTGGTTTTTAAAAAAAAAAAAAAAGTTGTGGTTATAAGCTCCACTGTAGGTGTCCGAAGACCTGGATTTTCATTAATTCATTAACTTAAT---CATTATTTTC--TACTGGTACTAAGAAATAAACTTCACCATTTTAATCTTCTTGACGTTCAAAGGTAAAATAATGCCCACACAAAAAGGATTCACC-AGTGGAAGAAATAGCTGGTTCCCTTT-TAGCTTCAATTTCCAAGTCCTTT------ATGTATCTCTGGAAACGTGTC--TTTTTAGCATGTTTACCCGGGTAATTCAAAGATAATCTTGTGATGCATTTTTTCAGGAGATG------------AAAATGCAGAGTTGTTACTTATGCCCTACAATGTGTAGTTCTTAAAATT-TGCTGCAGTGTTCTTGTTCAGATGCCCTTCCTGGTCTAT--------TTCCTTAAGGTCTTAAAGCAGT--GGTTTGTAATATGGTATATTTTTGTTTTTGTTTACAGTTCTGTATGAGTAACTCAAAATAATTGTCATCAGAATGCTCCAGGGCATCACGTAGGAATCTCT---TCCTCACTCAAGTCACATTATCTCTT .:.::.....x.x.......x.............x......::.x..x....:x..x.:x.....x:x::..:-.x.....::..:x.::.::..-----....x..xx...:...:....----------.:....:.:..-.....:.......x.....:.........x.........:....:.....x.......:.x......::......x..........x..x............:.............::......:.:..x...:.......x.:..:xxx.-....:.x.....-----------....x..:..:...xx....:...xx:..:.:.x.................:..x...x.:x.:.:...x.:........::.::------------------.:..........:...x.......-------.x:.x..........:--.:x::......--------....xx.:x......::.--.xx.:x..:.::..:x.::...x..x.....----------.x.::.xx:...:...xx:.xx.....xx.:x:.x..xx:...---:....x.:..--:.x..xx..x..:x..x...xx.x..x...........x..:xx.:x....--------.xx..x::..:x...:x:x...x..-.:..x..:x....::.xxx.x::.:.-....x...::.::..::...:..------..x.:..x:.:..x.::x:..--......xxx.x:..x.xx:.:x:x..:....x:-------.:...:x.::..x:x.......------------.:.:x.:.:.:...x..x..x::.xxx:x..x..:.xx.x:::......-..x..:.:x:xxx.x:.:..:......x.x...:..:.:--------..x:.......x.--..x....--..:...x...x.::.::.x..::-------------------------------------....x.....x...x:.......::...-.:x.x:.:.x..---.:.:..x:.x...:.x.....:::.. 73M1I21M5I21M10I11M1D151M1I12M11I85M18D24M7I16M2D11M8I18M2I31M10I43M3D10M2D51M8I25M1D26M1D23M6D21M2D33M7I22M12D49M1D39M8D13M2I7M2D23M37I28M1I12M3D26M 616/925 66.6% 1035/94230402 0.0% 172/925 18.6% 129947586 60266969 +3107 chr4 + 190214555 182564553 182564552 182564596 44 TTTGTTTTTTTGTTTTTGTTTTTGTTTTGTTTTTTTTTTTTTTG chr4 - 94230402 75766776 75766775 75766819 18463584 18463583 18463627 44 TTGGTTTTTTTGTTTTTGTCTGTGTTTTGTTTTGTTTTTTATTG ..x................:.x...........x......x... 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 106797777 83416778 +6129 chr4 + 190214555 182582691 182582690 182582847 157 GGGATTAAAGGAATTGTTTTAGACTCGATATGGACGTGTTAGAATGCTTTAAAAATCGATTCTAGCTAATGGAGAGAATGTTTTTAAAATGAACTATTGCCATTCCTTCAGTGAACCACATACAACAAGAAAAAATTCACATAAACATT---GAAGGAAA chr4 - 94230402 52627044 52627043 52627203 41603200 41603199 41603359 160 GGGGTTAATGGGGTGCTTGCAAGCTGGATGTGGATTTGCTGGAATGCTTTGAGAATCGATTCTAGCTAATGGAAAAAATGTTTTAGAAGTAAGCTGGTTCACTTCCCACCGTGAACAACAGAGAGTGGAAACAACATTTAATAAACCTTTCAGAAGTAAA ...:....x..::.xx..x:.::..x...:....:x..:.:.........:.:....................:.:........x:..:.:.:..:x.x.xx....:x.x......x...x.x.:::::..x..xx.:xx......x..---....x... 149M3I8M 108/157 68.8% 160/94230402 0.0% 3/157 1.9% 129955647 60258908 +25594 chr4 + 190214555 182583982 182583981 182584514 533 ACAGATTCCAAATAGATGATTTTTT----------ATTGATAAAT-------AGTAATATAAGTTTTACTGCAGT-----TTTAAGAATCATCAAGATTTTCAACAGAAGGGCTTATTTGTTTTAAACCCTAAGCCGCCTTTCTGAAACCTGAAAAAGATTTGTGAAAACAGCCTGCAATAAAAATCACACACACTTCATAAAACAGTACTTGATAGATATCACTTGCACCATTAAGAGCTAAACGACAAAGGATGTAATTTCAGTTCTGGCATGCAATATTAATCGAAAGCCTTTAAAACATCTTGCTGATGGGAACTATGACAACATGACATTGAAGAATTATGAGCTAAAGACATCTATCTTAATCAGATTTTTGAAGTAAATGCCATAAAACATAAAGTTGTTTTCTTCATCTTTACATTTTTACAT-GTTTTTGGTGGGAGCATGATTTTCTAGTGTGTTGCTTT---AAATG-CAGAGAC--TGCAAAATCAGTATTTAAAAGTATG-----AGTTCAGTACACAGAGTTGAAGCAAATTTTAGTCAATACACTCTGCATA chr4 - 94230402 52627729 52627728 52628285 41602118 41602117 41602674 557 ACAGACTTAAGGAAGAAGGTTTTTTTTTTTTTTTAATTGATAAACCTCACAAAAAAAGATAATCCCTATTCCATTCTGCATTTGAGAGTAGGCATGATCTTGCAT-GCAGGGCATGTTGGTTGTGAGCCATGAACAGTCTTTATGAAACCTGAAAAAGATTTGTGAAAACAGCCTCTAATAAAAATCACACATGCTTCATAAAACACTGCTTGATAGATATCACTTGCACCATTAAGAACTAAACGACAAAGGATGTAATTTCAGTTCTGGCATGCAATATTAATCGAAAGCCTTTAAAGCATCTTGCTGATGGGAACTATGACAACATGACATTGAAGAATTACGGACTAGAGACATCTATCTTAATCAGATTTTCAAAGTAAATGCCATAAAATAGAAAGTTATTTTATCTATTTTCACAGGGTCACATCATATGTGGTAG----ATAGCTTTTTAGCTTGTTTATTCTAAAAATACCAGAGACAAAGAAAAATCTCT-TTTCCAAGTAAGCTTAAAGTTCATTTCATAAACTT----CACATTTTTGTGAAAAGATACTTGATA .....:.:x.::x...x.:......----------.........:-------.:x..x....x:::..:.x..x.-----...:...:.x:x..x...:..xx.:-.x.....x.:..x...x.:.:..x.:.:.x.:....x................................x:...............::............x.:.............................:............................................................:............................................:.::...:........................::.................:.x......:....x.::..:..:...xxx.:....-:.x.x....:.----..:::...:...:x....xx..:---....:-.......--x.x......xx.-...xx.....x.-----......x.x..:.:.x..----..x.....x..x..x.x.:x..xx... 25M10I10M7I23M5I25M1D325M1I11M4D23M3I5M1I7M2I12M1D12M5I18M4D27M 420/523 80.3% 557/94230402 0.0% 44/523 8.4% 129956253 60258302 +70800 chr4 + 190214555 182600105 182600104 182601191 1087 TCTGGTTTAAAACAAAAATATTTGTATCACTGACATAGTGGCATGAGCCTATCTGGTCACCTATGACTTACTTCAGAATGTAGTTACACTGCTTACTGTGAAATTGGAAAATCTGTTCTGTGTGTGTTCTAATGGATGTGACGGTCATTAAGTATATGAGTCTTCTGACGTTGTAATCAGATGTGATTCAGTCTGTTAAGTACCCATGAAACAACATCTGCTTCACAGAGTGACCTTCTGCTAAAGAATACTTAGCATCTATTAGTAGATCATAGTGCAGATCTGCCTTATTTGAAATGCACTAAACAAGAGTAGTCTACTGCTGTTTAGCAACTAGCTTGTAATAATTTATTGCAGTTAAATAAAGCTTAAAAAAACTCCATTAAATAATTATAGGGATTATATGCATTTTGAAAACCTTTGTGTTCTACTGAAATTACCCATTTAATTTCAGGGTTGGTTTGTT-------AAAAAAAGCTGAAATCTGAAGGCACATTAGAGGAGCTGTCAGATGCTGTTTTCTGTAGGTGTTAATAAAACCAGA-------------TGAAAAAAAAAT---------CTGAAACAAATTAAAACCAAAAGCAATTTTGCCATCTGTTGTGTATTAATTAGAACTTTGTGTATCAAGGGTAAACTTGCTCTTAGAGAATGTCACTGAACACCCACTTAATAGAATAATATGCAAATTTATTAGGTTATGGATTTATATGCAGTTTTTAATTCTAATTCATCTGCAGTGGATCCCCAAGAAATTGGTAGTGTGTATATACATATATATATATATAATGAGTTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTCAGAGCAACCTGCAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCATCCATCACTTCTCTCAACAGAAACTCCCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCCGGCTGCTTTGCCCGCCGAGCTGCAAACCACACCCGAGTCCGTCCAGCTGCAGGACAGCTGGGTCCTTGGCAGTAATGTACCACTGGAAAGCAGGTAACATCTAAAATTTCAAAATAAGCTAGC chr4 - 94230402 52634114 52634113 52635185 41595218 41595217 41596289 1072 TTTGGTTAAGTTAAAAAATATTTCCTCTGCTGTT-TAGACGCCTGA--CTCTCTGATCACCTGTGACGTACTCCAGAGTGGAGTTCTATTACATAGTGTGAAATTGGAAAATCTGTTCTGTGTGTGTTCTAATGGATGTGACGGTCATTAAGTATATGAGTCTTCTGACGTTGTAATCAGATGTGATTCAGTCTGTTAAATATCCATGAAGCAACATCTGCTTCACAGAGTGACCTTCTGCTAAAGAATACTTAGCATCTATTAGCAGATCATAGTGCAGAGCTGCCTTATTTGGAATGCACTAAACTAGAGTAGTCTACTGCTGTTTAGCAACTAGCTTGTAATAATTTATTGCAGTTAAATAAAGCTT-AAAAAACTCCATTAAATAATTACAGGGATTATATGCATTTCGAAAACCTTTGTGTTCTACTGAAATTACCCATTTAATTTCAGGGTTGGTTTGTTTAAAAAAAAAAAAAGCTGAAATCTAAAGGCGCATTAGGGGATCTGTCAGATGCTGTTTTCCGTAGGTGTTAATAAAACCAGATTTAAAAAAAAACTGAAAAAAAAACCAAAAAAAACTGAAACAAATTAAAACCAAAAGCAATTTTACCATCTGTTGTATATTAATTAGAACTTTGTGTATCAAGGGTAAACTCTCTCTTGAAGAATGTCACTGAATGTCTGC-TAATAAAATAATATGCAAATATATTAGACGATAGGATCATATTGAATTTCACATTCTGCTTTGGATGTAGC-AACTGCTGAGACGCTG--------------------------TGTAACGAA------------CTTTTAATTTTCTTTCTTCTTAGAACAACCTCCAAATAACCAAGGCCAGTCGACCCTGCAGCCTTTGCCACCTTCTCACAAGCAACATTCAGCACAGCATCACCCATCCATCACCTCACTTAACAGAAACTCACTGACAAATAGGAGGAATCAGAGTCCGGCCCCGCCGGCTGCTTTGCCCGCCGAGCTGCAAACCACACCTGAGTCAGTCCAGCTGCAGGACAGCTGGGTCCTTGGCAGTAATGCGCCACTGGAAAGCAGGTAATTACTTAGGTACTACTACAGACTGGC .:.....x.:xxx..........x:x:::...x:-...xx..x...--..x....:......:....x....:....:..x....x:.:.:.x..x.......................................................................................................:..:.......:......................................................:...............x............:............x..............................................................-......................:.................:......................................................-------.................:.....:......:...x..................:.....................-------------...........:---------..............................:...........:..................................:x.....::..............:::.::.-.....:..............x......::x..:.:x.:....xx.:...:xx.....:x..::xx..:..:-:.::x.::...x::..--------------------------.:...:..:------------:....xx....:...:..:.:...:......x...::..:...........x...........:.....:.....:..:.....:..:..x...........:...........:..x..:...........x.....x.....:.....:..................................................:.....x.....................................::..................:xx..x.::.x::.xx.:.::..:.. 34M1D11M2D322M1D95M7I75M13I12M9I107M1D71M1D16M26D9M12D291M 905/1043 86.8% 1072/94230402 0.0% 73/1043 7.0% 129965991 60248564 +12398 chr4 + 190214555 182602733 182602732 182603901 1169 GAGGTTATTAGCACAGACGTAAATTTACCCAGTGTAATTAATTAGCACACACTGAACAGCTAATCAACACCGATTCACTATTGTCATTTGGAAAAAATTTATTAGGAAAAAAGTAATTTTCCAGTTGAGTCATCAGATTGAATATGGATA-TTACATTGTAGTTGACAATAATTGTTTTGACAAATATTTATGAAATATGTCAAATTAAATCCTCAGAAACGTGT------TTAATTTTAGTGATGTTATAAAACACAAAAGCCTCAAAAACTGTCAGTAGGAGAGTTAGCATTCCGTGAAACCATGTCTTCCAGTGAATTTGGAATAATTTTGAGAAGAGTAAGATGCGTTCTTGTT---------ATTCGTCTT----------------ATTGCACTGGAAATTTTGATTGATGAGACTTTAAAGAAAGAAAGTAGTTGGTTAGAAGAAAATCCACTGTAGCCATAT-------------------GTGAAATTGTAGCTGGTTTCTCTATATTCAGACCATATAAG-----AAATCACTCCCATGGTGAGTAGTT-------ACTGAGATTTTCTTCCATTTCAAAGTAATGCCATTAATGAAT--CATCAATGGAATTAATATTATACAGTTTTATGAGTTTCAGGGAGGAAATCAACCGCTGATATGATCTCACTAATAAATATACAGAATAATTAATCTAAAAATTTGTTGTTACACTAACAAATTTTAATCTGCAGTATAGTTTTGTTGTTTTCTCGTTATCCAAAGTTCACATCTTACAGTGTCGCTAATCAAAAGA-AATGATATTTCAACTTGCA-GTACTCAGTGAGTGAAGCTAAGCAGTGATGTGAAAATCTCACACTGTA-CCGACACAGTACTACTGTGGTTTCTTTAATAGTCTCACTTGGTTGGAACTCTGGAGGTGAAGAACCAGTCTTATTTATCATTGATTTTTCCTTCTTTTAGTTAAGGTTCCCTATTGAGTATGATTCTCAGACTCAGTTTCAGCTATATTAACAACTTTATCCAGACTTGTGTCTGCCTTTAACTATTTTTTAATCTAGTGTA----TTGTTTCATCTTTGGCAATTATTTATATATATATATATATATACACACACACACCGATTTTGCTAATTCTCACTTTT-TCTGA-------AACTGCCACTTAAAGGTTATAAGCTATGAAGTTTAAAATTCAGTTACGAATAAATAAGAATCTCTATATTTTTCTCT chr4 - 94230402 52635761 52635760 52636858 41593545 41593544 41594642 1098 GGGCTTACTGGCACAGAGCTGAATTTACCTACAGTGATTAATTAATACTCATGAAACAGTCAATCGGCGCTAATTTTTTATTAGCAT--------------------AAGCCATAATATTCCAATTTAGTCATCAGACTTAACATTTACAACTATATTGAAGCTGACAGTAATT--CCTGA-AAATATTTATAAAATCCCTTTAGTTCATTCTTCAAATCCTTTTAGCTTATGATTTGCAGTGAAGTAATAATA-------GTCCAACTGATTTTGAGTACGTCAG--AGCAT-ACATGACCTCAAGATTTTCTGTTAGGTTGTTTTATCCCTATGGAAGTTTCAAGCAACTCTTGTTTGGGACATAGTTTAGCTTCCCAAACTTAAATGCTACTATACTGCTTATGGTGCTTG--GGGACTGTGGAACAGGA------TTCCTCTGAAGGGATTTCATCAT---CATATTCAGATAATTTAGTACATTGGGAAAATGTTCAGGATTTTTTTAGAGCAAGAGTTTGTAGGGCAAAAGACTATTAAGATGGTGGATGATTTCAGGACACTTGGTTGATCTTCTGTAGACGGATAAGATCTTTGATATTTGCTTTCATTGCCAT-------ATCTATTTTCACTGGTTTTATAAATGTACTTGAATGAGAATACCACTTC-------------CAGTCTGGAT----TAAGTATTTTTTGTCAAA-TAGATACTTTTAATCT-------------------------------------------TTTAAACATTCCTGATGAGAAGCTAAGGGTGTTTGAATGTTCGTGTTTTGAACACTTGTACCTGAGTTGAAATGTGAAAGTTTCACATTAAAACTGACACAGCTTTATTGCAGTTTCTCTAACAGTATCACTTGGTTGGAAAGTCTGAGGTGAAGAAC---------TTGTCATTGATTTTTCTCT-TTTTGGTTGAAGTTCCCTACTGAGAGCGATACTTAGTCTCAATTTCAACTATATTAACAACTTTGT---GATAGGTTTCTTCCTTCATCCATTTCTCAGCCTAAAAGAAAGTTTATTTCATCCTTGGCAGTATTTTAGCT-----------TATGCCCATACTCAGCTCTTCTTTTTTTTTTTTTTTTTATCTTACTTAGATGACTGTCATTTA--------GAGCTACAGAATGTGAATGTCAG-------CATATATACATAGCTATCTTTCTCTCT .:.x...:.:.......xx.:........:.xx..:........::..x..:x:.....::....::.:.::...:x:....:x...--------------------..:xx:....x.....:..x..........:.x..:..xx.:.-:..:....x..:.....:.....--::...-..........:....x:x.:x.:..x.x..:...:.xx.x.x.------.x.x..x:.....x..x....x.-------.:.:x.xx:.:.x.x....x.xx..--.....-x.:...xx:..x.x:..:.x..x.:x...xxx..x:::.:x.:.::x.xx:.xxx::.......---------:..::x...----------------.:.::....xxx..xx..x...--.:....x.::.:x.:..------..xx.:x....::.x.:..:::.---.....-------------------.x....x...xxxx.:...:.:..x.x:x...x:x.:..:.-----.:.::.:.xxx......::.::..-------...x:.x.xx.....::.xxxx:::...x::.x..:..:xx.--:x...x..xx..-------..x:.x...:.:x:....:.x::.x.x.x.::.x:.xx:...:x.::..-------------...xx.::x.----...:x....x....:.x.-..:xx.x.........-------------------------------------------..xx.:::.:x..:..x.:...x-..x.:.:...x..:x.x.:-..x:.x.:::xx..x.x..:..:x.x:........:.:.....:.:x.-.:.......:x:..:..::......:...:...x..............xx::x............---------..:.............::.-....:...:.:........:....x::...x..:..x....:.....:................:.---..:xx..x...x....:.x.:....:.:.::...:x:x.----..:.......:......:.xx....xx.-----------...:.x..:..x..x.xx..:.x:.xx..:.:x:....-...x.-------:....:..:...--------:.....:::.:.x.:..xx....-------:.x...x:x..xx....x...:..... 87M20D43M1I23M2D5M1D43M6I23M7D25M2D5M1D64M9I9M16I22M2D17M6D23M3D5M19I41M5I24M7I42M2I12M7D49M13D10M4D18M1D16M43D23M1I19M1I48M1I65M9D19M1D66M3D39M4I28M11D38M1I5M7I12M8D23M7D27M 644/1018 63.3% 1098/94230402 0.0% 231/1018 22.7% 129966972 60247583 +14205 chr4 + 190214555 182613829 182613828 182614143 315 GAAAGCATATTTTGTGCAATTACTAATAGGTCATATTAATTCAGGTAGCAG--CAGTGAAGTGTATCTTGTTTATAAGCTTTGCATTTAAGACACCTTTCTTGCAGGAATCACCTCCTAGTGTGAAAGTTTTCCAAAGATAATAGCACATCAATTCAAAAGTGTAATAGATTTGAGACCACAACATGCTATCAGCATGAAGAAGTAGTTTATCAGTCTCACTAACTCACGGTGTCACAGCTAGAATCATTACATATTTGTTCTTTTGTTTTCCCATCAAAGTACATAGTTTACATTGTAATGTTG-GTTGCTTATTTT chr4 - 94230402 52642119 52642118 52642435 41587968 41587967 41588284 317 GAGACTATATTACATGAAATTCTTGTTGGTTGGTGCTAGTTCAGGTAGTGGTACAATGAAATTTATCTTGTTTGTAATCCCTTCCCTTTGAAAATTATGCTAGCAGGGATCATTTCATGGCGTGAAAGTTGTCCAGAGATAATAACACATCCGTTCCAACGCATAATAGATTTGAAACTGCAGTATGCTTTCAGCATGAAGATTCAGTTTATCAATCTCACTAACACACTGTGTCACAGCTAGAATCATTATATATTTGTTTCTGTGCTTTCATGTC-ATGTGTGTGTGTTACATTATGGTATAGTGTTTCTTAGTTT ..:.x:.....x::..x....x:.:x.:.x.x:.::..:.........::.--..:....:.x..........:...x.::.x.x:..x::.x.::x.x..x.....:....::..x.:.:.........x....:........:......x:...x..x.::............:..::..::.....x............xx:.........:..........x...x.....................:.........::.x..:....x::..-.x..:::.:xx.......:.::.:.x.-...x....x... 51M2I224M1D27M1I12M 226/314 72.0% 317/94230402 0.0% 4/314 1.3% 129971710 60242845 +3431 chr4 + 190214555 182621635 182621634 182621814 180 ATATATAATACATATTATAATATATAATATGTATTATATATATAAAATATATAATATATATTATATATAAAATATATAATATATATTATATATAAAATATATAATATATAATATATTATAATATATAATAATTATATATTATATATAATTATATATATAATATATAATATA-TATATTATA chr4 - 94230402 67910065 67910064 67910224 26320179 26320178 26320338 160 ATATACAATAC---TAAAAATATAC------TATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATA---TACATGTGAGATAAATTTAAGCTGAT---------TAAATATCAACATTTGAATACATATAAGAAAATATTTTATTAATGACACACTACATTACA .....:.....---.x.x......:------.....x...:....x.x.....x.:.....x:......x.....:..:....---..:..:.:.:...x..xxx.xx.:..---------..x...x:..:xx.xx.x..:......xx.x....x.x..xx..:.:.:.-..:....:. 11M3D11M6D52M3D26M9D50M1I9M 111/159 69.8% 160/94230402 0.0% 22/159 13.8% 114711570 75502985 +3295 chr4 + 190214555 182621706 182621705 182621825 120 ATATATAATATATATTATATATAAAATATATAATATATAATATATTATAAT--ATATAATAATTATATATTATATATAATTATATATATAATAT-----ATAATATATATATTATATATATATATAT chr4 - 94230402 22326845 22326844 22326969 71903434 71903433 71903558 125 ATATATAATGCATTATATATGTAACATGTTTAATCTTATATAAATCATAATACATATGATGAT--TAAAATACCTAACATTTCATATATAATACATTCGATAATGTAAAAGTCACAGATTCATGTAT .........::..xx.....:...x..:.x....x.xxx...x..:.....--....:..:..--..x.x..:x..xx...x:..........:-----.....:..x.x:.:.:.x..x:..:... 51M2I10M2D29M5I28M 83/118 70.3% 125/94230402 0.0% 9/118 7.6% 160294861 29919694 +3063 chr4 + 190214555 182623476 182623475 182623537 62 GTATTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTACTGGAGACAGGGTTTCAGTGTGTT chr4 - 94230402 18668472 18668471 18668533 75561870 75561869 75561931 62 GTATTTTGTTTGTTTGTTTGTTTTCTTTCTTTTTTTTAACAGAGAAAATGTTACATGGTTTT .......................x:..x:..x......x::....x.:x...x..xx..x.. 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 163955004 26259551 +20424 chr4 + 190214555 182628618 182628617 182628894 277 TGTATCTTATAATGATATTCTCCTTTTCCACAGGCATTTCCTATTCAAAACAGGAACAGGTACAACGCCACTGTTCAGTACTGCAACCCCAGGATACACAATGGCATCTGGCTCTGTTTATTCACCACCTACTCGGCCACTACCTAGAAACACCCTATCAAGAAGTGCTTTTAAATTCAAGAAGTCTTCAAAGTACTGTAGCTGGAAATGCACTGCACTGTGTGCCGTAGGGGTCTCGGTGCTCCTGGCAATACTCCTGTCTTATTTTATAGGTAAG chr4 - 94230402 52654420 52654419 52654695 41575708 41575707 41575983 276 TGTACTTTACCAT-ACACTCTTTCCTTCCACAGGCATTTCCTATTCAAAACAGGAACAGGGACCACACCGCTGTTCAGTACTGCAACACCAGGGTACACAATGGCATCCGGCTCTGTTTATTCCCCTCCTACTCGGCCACTACCTAGGAACACTCTGTCCAGAAGTGCTTTTAAATTCAAGAAGTCTTCGAAGTACTGTAGCTGGAAATGTACTGCTCTCTGTGCTGTAGGGGTCTCAGTGCTGCTGGCAATACTGCTGTCCTACTTCATAGGTGAG ....::...:x..-.:.:...::::...................................x..x..:..:.................x.....:..............:..............x..x....................:.....:..:..x.............................:....................:.....x..x.....:...........:.....x...........x.....:..:..:......:.. 13M1D263M 241/276 87.3% 276/94230402 0.0% 1/276 0.4% 129974198 60240357 +10349 chr4 + 190214555 182629156 182629155 182629512 357 AAACATGGATAGCTCTGTGGCATTTCATGTACACAAAATAATTCATGCGCTTGCAGTAATGAACCCTGTGCA-GGATTTCCTTCAATGCGTACTCAATAGGGAGCTCTCCAC-TGCTTGTGATATTGTAAGTCTCTCAGCTCACTCAGCCATCTAAATGTAAAACTCATCACTCAGGGCCATCATCTTGCACTCAGGAACACTCTCCAGAGAACTGGGCGTCCATAAAGCAATGAATGGATTATATACTCATTCATATATGTGGATTTTTCTTCTCTTCTGATGTAGTATTGATCATGTTTTTCATTTGATA-GTAACCCAAATA-------ATGGAAGCTACTAATAGAAGTTGTAAATATTGCTT chr4 - 94230402 52656490 52656489 52656831 41573572 41573571 41573913 342 AAACAACCATATCTGTACAACATTTCATGGGTGCTTGCCAACTCACATACTTGCTGAAATAAACAATGCACAAGGGCCTTCCTCTGCCTGTAGTCAATAGGGATCTCTTTGCCTACTGGTGATATTACACGTATTTCAGCTAACTCAGCAATCTAAATGTAAAATCCA--------------------GCACTCAGGGATGATCTCTAGAGAGCACTGGGTCCATAAAACCATGAATGGAT--TATACTCATTCATAAATGTGGTTTTACCATCTCTGCAGGT---GTATCAGAAATACTCTCCATTTAGTAGGCCATCTAAGTATGAATTGGTGGAAATCATTTATGTAGGATGGAAACAGTCCTT .....xxx...x..x.::::.........x:::.xx:x:..:...::::.....x.x...:...xx..::..-..:::.:.:..x::x:...x..........x....:::.-.:..x........::.x..x.:......x.......x..............::..--------------------.........:.::x....:.....:.xxx.x.........:.x..........--..............x......x...x:.x.....x.x.:.---....:::xx..::.:.:.....::..-.:x.:.:..:..-------:.....:::.:.x..:x.:.x..x...:.x.x... 72M1I39M1I55M20D53M2D40M3D26M1I12M7I35M 226/332 68.1% 342/94230402 0.0% 35/332 10.5% 129972666 60241889 +10886 chr4 + 190214555 182642925 182642924 182643189 265 TAACAAATAATAATGAATTAGAATGCCAAAATATTGCCCAACACATTCTGTCAACACGTATATGAACACAGCAGGAAATCCAAAACAAAAGCTAATTTATAGAGAACTCTGTGTTCCTAATGACAGTTTAGACCAGTAGGGGTCCAAGTTACAAACTGCAGTCTTCACATGC-GATACTTTCATTTTACATTGAAAGCTTGGTTGCACTCTGGATACATGTAGCCAATCAAATGATTGCCCTATATTTAAGAGTA------TTTTTCTTATT chr4 - 94230402 52665381 52665380 52665652 41564751 41564750 41565022 272 TAACAAATAGCAAAGGATGAGAAAACCTATATGTTGACTTGCACGTTCAATCAACTCGCATATGATCTCAGCAGGAAATTCAAAACAAAAGCTAATTTATGGAAAAATATGTAGTTCTAATCACAGTTTAGCTCTGTGGGGTTCCAAATAACACACTACAGTCTCTACATGCAGATGCTTTCATCTAACATTCTACATTTGGTAGCATTCCAAAAGTTCTTATCAAACCTTATTATCATCTTTTATTAAATCTTACTACATTTCTCCTTATT .........::..x.:..x....x:..x.x..:...x.:x:...:...x:.....x..:......x.x...........:....................:..:..x.x...:x.:.....x.........x:.x..:...x.....:.x...x...:......::......-...:.......:.x.....xx.x::.....x...:..:::.x::x:x..x.x..:.xx..x..:::.:.x....x..xxx..------..:.:...... 172M1I82M6I11M 188/265 70.9% 272/94230402 0.0% 7/265 2.6% 129977544 60237011 +11883 chr4 + 190214555 182653710 182653709 182653956 247 GCAATT-GCCGTTGTAGCTGAAGGCAGCAGATCTTTAAACAACTTGTGTTCTTTACCCCCAGCAATGCATCTCTTTGGCCTCAACTGGCAGCTACAGCAGACTGAAAATGACACATTTGAGAATGGAAAAGTGAATTCTGATACCATGCCAACAAACACTGTGTCATTACCTTCTGGAGACAATGGTAAGCG---------------------------AAAGAATTATGTATCCTGTGTTTCTC--------------TTTTAACATCCCTTTTCCATAAATTTATTT chr4 - 94230402 52674732 52674731 52675012 41555391 41555390 41555671 281 GCAATTCGTCTTTGTGGTTAAGAGCA--------TCAAATAAACTGTATCCTTTACCACCAGCAATGCATCTGTTTGGCCTCAACTGGCAGCTGCAGCAAACTGAAAATGATACTTTTGAGAATGGGAAAGTGAATTCTGATACTGTGCCAACACATCCTGTAACAGTACCTGCTGGAGAAAATGGTAAGTGAAACGCTCCCATTTCTTTTCTTCTCTAAAAGTATTTTCTTTCTTATTGTTTTCTTTACATCACCAGTTTTTAACATTTTTCTTCCAAAACTTTGTTT ......-.:.x....:.:.:.::...--------.:...:..x:...:.:.......x..............x....................:.....:...........:..x...........:.................::........x.:x....:x..x.....x.......x.........:.---------------------------....x...x.x.x..:.:.xx..:..--------------.........:::.:.....x..x...:... 6M1I19M8D158M27I26M14I30M 192/239 80.3% 281/94230402 0.0% 50/239 20.9% 129978978 60235577 +8180 chr4 + 190214555 182654259 182654258 182654813 555 AACACTGTATTAATTTTATTATAAAAGCATTTAAA-TGCAAAGCACATTAAAGGATTATAGTTTATTGACCTTTTCTCTGGTTGCCCTTT------CTCTAAACCTTTAAGAA--TTTGCACTTTGAGCTAACAAAGATTTTGAAATCAATTGGCTCTGAATTAAAAATGGAATTTAAGTAGTTAGAGAATTCCATTTTTTCAATATAAACACTTAGAAAAGCGTATACATACATATGTACACTTACGTTACAAATAGTTTTATATTATTTCTGTGTGTGTGTGTGTGTACATGTCTTGGC-CTTGGTATCCTCTGACTTTTTGCAAAATATCATAATACTTTATATCTCAGA------GCATCCTGATGAAGACGCCTTTTTCTGTCATCTGGTTAAT-------AAATTATTT------CCCTTTAAGCATTCCCCTAACTCGTCTTCCTCTTTGTTTCTTGTCTAGTATATTGGTGTTCAGCTTTGGCATTAATATGTCTATCCTCATGTGGCTGGTTTCTTTGCAAGACTGGAAAGAAATTATTCTACATTTAATGAACTTATTATATGTTGCTGTGTCA chr4 - 94230402 52675799 52675798 52676328 41554075 41554074 41554604 530 aaaaCTTTACTAATTTTGTTGTAGGAGCTTTTAAAATACAACCCACATAAAGGGATTATTTCTTATCGACCTTTTTCCATGTTGCCCTTTAAGATTCTCAAAACATTTAAGAGCCTATGCACTTTTGGCTAACAGAGGCTTTAAAATCAATAGTTTTTGAATGGAAAACTTGATTTAAATGGTTGATGAATGCGGTATTTGCTTCATTA-----CAGAAAA--------ATCCATTTTCCCTTTCACA----AGGTAGAGCTGACCTCCTTACCACTGAGGAGGAGGAAGCATCTGCCAGCACTTGACATCTTGAAAATTTTT-CAAGTTATCACA--GCTCCAAGTTATAGAAATAATACAGCTTG-----GATCATTCTTTCTGTCATCTTTTTAAGCACATGAAAATTCTTTAGTAGGACTTTT---CATTTCCTTTACCCTACTGCCTT----TTTCTTGT------------------ACTTGGATATTCAT-TATCTCTTTCTGTGTTCTTATTTGTTTTGAATGAATAGCAAAAAGGTGCTGTACGGTTAATGAA--TATTG-ATGCTGATGTGGCA ..x...x..:.......:..:..::...x......-.:...xx.....x..:.......xx:....:........::.xx..........------...x....x.......:--.x........x:.......:..::...:........x.x:.:.....x:....:xx:......:.:...::x....x.x:.x...x.xx:..x.-----:......--------..x...x.x:x.x:.:..:----.::...xx:.:xx:.x:..x:xxx..x.x:x.x.x:x:...x.x:::..-....::...:.xx:.x.....-...:x.....:.--:..::.x:.:x:...------:..x.:..-----..:xx:.:............xx....x-------.....x...------x.:...---....:..:.x..:.xx..x...:----........------------------:...x.::...x..-.:...x.:::::...xx:.:x..x:....x.x..x.:.x..:..:x.::.x...:x........--....:-...:..x....x.. 35M1I54M6I17M2I94M5D7M8D19M4D49M1I21M1D12M2D15M6I8M5D27M7I9M6I6M3D23M4D8M18D14M1D64M2D5M1D14M 330/501 65.9% 530/94230402 0.0% 83/501 16.6% 129978460 60236095 +18472 chr4 + 190214555 182672970 182672969 182673286 317 AATTTGTTCTTCATCAGTGCATCTCTTACAT-TCAGGAAAATTAGGTGGATTTACGCAAGAAAATAACACCATAGATTCCGGAGAACTTGATATTGGCCGAAGAGCAATTCAAGAGATTCCTCCCGGGATCTTCTGGAGATCACAGCTCTTCATTGATCAGCCACAGTTTCTTAAATTCAATATCTCTCTTCAGAAGGATGCATTGATTGGAGTATATGGCCGGAAAGGCTTACCGCCTTCCCATACTCAGGTAAGACTAGGCTTTCTTATCAATAAAATA--------AAAACTGCCAG-TTGCATTTTTTGAAATTATTCTCTTT chr4 - 94230402 52682304 52682303 52682627 41547776 41547775 41548099 324 AATTTTTTCTCTCTTATTAT---TCTTACCTGTCAGGAAAATTAGGGGGATTTGCACAAGAAAACAACACTATAGATTCTGGAGAACTCGATATAGGCCGAAGAGCAATACAAGAAGTTCCCCCTGGGATTTTTTGGAGATCACAACTCTTCATTGATCAGCCACAATTTCTAAAATTCAATATATCCCTTCAGAAAGATGCATTGATTGGAGTATATGGCCGAAAAGGCTTACCACCTTCACATACTCAGGTGAGAGCTGCTTGCATTAAAAGTAGAGTAGATTATTGAAAACTGCGAGTTTGGATATTTTGTATCTTTTCCATTT .....x....::x.:.x.::---......x.-..............x......:.:........:.....:........:........:.....x..............x.....::....:..:.....:..:...........:....................:.....x...........x..:........:..........................:...........:.....x...........:...x:x.x:.x:x...xx.:..:.:..--------........x..-...x..x.....x.x:.x...:x... 20M3D8M1I249M8I11M1I26M 258/314 82.2% 324/94230402 0.0% 13/314 4.1% 129990666 60223889 +6425 chr4 + 190214555 182676075 182676074 182676236 162 CAGCCCAAATTGAACATTTCTCTGTTTCTGGAGAACATTAAATAAATCAACCTGAAATAATTAAAATTGGCCAGCCATTCAGAA--TAGTTGCTTGAGCTTTCGCAGTCTTTGTGACCCTTTGTAAAACTGCCCGTTTGATTGTTGCCAAGGAATCAGTGGGCT chr4 - 94230402 52686533 52686532 52686696 41543707 41543706 41543870 164 CAGTATGAGATGCATAGTTCTCTCTTTCTGGGGAATCATAAATAAATCAACCAGAAATAATTGACAGTGACTGTCCATTCAAAACCTAATCAATGTGAACCTGAAAGTCTTTGTGACACTTTCTAAAAATGTCAGTTTCATTGCAGCCAGGGAATCAATATGTT ...:x::.:x..x.:.x......x.......:...:xx..............x.........:.x.x..:.::x.......:..--..:.::x.xx::x::.x:x............x....x.....x..:.x....x....:x....:.......:.:x.:. 84M2I78M 112/162 69.1% 164/94230402 0.0% 2/162 1.2% 129989542 60225013 +17796 chr4 + 190214555 182679643 182679642 182679896 254 ATTTTTCCTCGTCCTCCCCCCAGTATGACTTCGTGGAGCTCCTGGATGGCAGCAGGCTGATTGCCAGAGAGCAGCGGAGCCTGCTTGAGACGGAGAGAGCCGGGCGGCAGGCGAGATCCGTCAGCCTTCATGAGGCCGGCTTTATCCAGTACTTGGATTCTGGAATCTGGCATCTGGCTTTTTATAATGATGGGAAAAATGCAGAGCAGGTGTCTTTTAATACCATTGTTATAGGTAAGAATAGTCTTCAAAGC chr4 - 94230402 52688680 52688679 52688933 41541470 41541469 41541723 254 ATACTCCCTTCTGTTCCCTGCAGTACGACTTTGTGGAGCTCCTGGATGGCAGCCGGCTGATCGCGCGGGAGCAGCGCACACTGCTGGAGGCGGAGCGAGCGGGTCGGCAGACGAGGTCCGTCAGCCTTCATGAAGCAGGTTTTATCCAGTATTTGGATTCTGGCATCTGGCACCTGGCCTTTTATAACGATGGGAAAAATGCAGAGCAGGTGTCGTTTAATACCATTATTATAGGTAAGCATTGTCTTCAAAGC ..x:.:...:x.x:....:x.....:.....:.....................x.......:..xx.:........x.xx.....x...:.....x....x..x......:....:.................:..x..:...........:...........x........:.....:........:..........................x............:...........x..x........... 254M 216/254 85.0% 254/94230402 0.0% 0/254 0.0% 129990963 60223592 +50004 chr4 + 190214555 182680205 182680204 182682024 1820 GGCAGGCTATA-----CAACAAGTGTTCCTTCTTTCCTTTTTCTTCAGAGTCTGTGGTGGAATGTCCCCGAAATTGCCATGGAAATGGAGAATGCGTTTCTGGAACTTGCCATTGTTTTCCAGGATTTCTGGGTCCGGATTGTTCAAGAGGTATGCAAGTTAGATTCTT-CTCTTAAGCCGATATAAATAAGCTGTAGAAACACAAGTGATTCCAAAAACTACCGAGACAGGAAAGAAAGGGGGGGGGAGACTGGCATATTGCTTGTTCCAGCGATGTGTCTTTTCTTTCGGAAGCTC-GGTGGAAAGTGTGGCTGTAATTCTTCTGTCGTGTCTTGTTTCACAGCCGCCTGTCCAGTGTTATGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTGTTTCAGCGGCTGGAAGGGCACCGAGTGTGATGTGCCGACTACCCAGTGTATTGACCCACAGTGTGGGGGTCGTGGGATTTGTATCATGGGCTCTTGTGCTTGCAACTCAGGATACAAAGGAGAAAGTTGTGAAGAAGGTAAACATGTCAATATTCACAGAAGT--------CTGTTG---------------------------------------------------TTATCTTCAT--------------AAAGAAACAGATTGTATCT------GTAATCTTTAGTTGGGCAGATCTCTTTTATACGCTTCCTTTTGAAAGCAATTTTGA-------AAAATCCATGTTTATGAA----------TGC------ATTGTTTTACTAACATTTTAACTAATAAA---AAGAACAAGCACCAAAGGGCCCCTTTGCTCTTTTTCAGCACTGTGAATCATTCCTTTTCTTCACTCTGA-GAAAGCAAGCAAACCTTTATGCCTTGAAACTAACAGCGGA--------CGGTTGATTTTATTTT-----TCTT-------TTTATAGTTTTTTACATTGAT--GCCAGCTTCTAAATCTAGCATTTTGACATCTCTAGAAAG-ACAGAGTAGTACACATAATATGCTACCTAAAAGAAGTATGACATCATGGATGTGTTCCATAGCTGTATACGTATAATGATGAGAGTCGAGATACCATACTGTAAAGTGCAGGTGA-----------ATTGTTTTTTCAGAAAGCAAAAAAGCACCATTTCCATTCTTCAATCAAATTGATTTTATTGATCTGCACACACAAAGTAATGCAATTAAGTCTCTGGAATTAAATTTTCAGGCCATTGACCCTACAAGTGTAAAGTTTTATTGAGTCAAATTGCTAAATTAAATCTCGTCATCTAAAGCACATTGAAGTGAATTAAGAAGGATAGAGAGTATGCAACTCATTTATTTCTCAAACAGTGTGAGGATCCCATACAGCTGTCAGTACTCAGTGGTCACAGATTTTG-----------------TTATAGAGAAGGCAATACTTATTACTCTGTGATTAGGCAGAACAGAGAGCAATAGTCTGAAACCTCAAG---AGCCTGTGTGTGTAATTCAGGAAAATTACAAATCCTTGCAAGAGTCTCAATTACCTAAATGGCATT---------------AGGC---------------TGGATCTTA----------------------------ATGCTTTATTGTATTATAATTCTTTGCATTTT--CAGAAACAAGTTCTTGAAAATGGTAGATAAATATTTGATTTTCCAAAATGTTC------------------------------ATATAAATTAGATTAGGATTTAATTCTTTTTTCTGCATGCACTATGAT-------------------------ATCTTCTGGA------------------TTTAATAA----------------------------------------------------------------------------------AATTGTTCTTTTCTTTACACCAGCTGACTGTATAGACCCTGGGTGTTCTAATCATGGTGTGTGTATCCACGGGGAATGTCACTGCAGTCCAGGATGGGGAGGTAGCAATTGTGAAATACTGAAGACCATGTGTCCAGACCAGTGCTCCGGCCACGGAACGTATCTTCAAGAAAGTGGCTCCTGCACGTGTGACCCTAACTGGACTGGCCCAGACTGCTCAAACGGTGAG-GTTAA chr4 - 94230402 52689713 52689712 52691818 41538585 41538584 41540690 2106 GGCAGGTTCTGGGGGCCGGTGAGTGATCCCGCTT--CTTTTCCTGCAGAGTCTGTGGTGGAATGCCCCCGGAATTGCCATGGTAACGGAGAGTGTGTTTCAGGATCCTGCCATTGTTTTCCTGGCTTTCTGGGCCCCGACTGCTCGAGAGGTACATCAGCCCCATCCTTACCCTCAAGTCAGCCTAAGCAAGC-GTGAAAACA---------------------AATACATTAAGAAA---------GAAATCGGCATGTGACCGACATCATAGATGT---TCTTGTTTATAAAGCTTTGATGAAAACCTTGATTTGAATTTCTCCATGGTGCTTTATTTCACAGCGGCCTGCCCGGTGCTGTGCAGCGGCAACGGGCAGTACTCCAAAGGCCGCTGCCTCTGTTACAGTGGCTGGAAGGGCACCGAGTGCGACGTGCCAGCGACGCAGTGCATCGATCCCCAGTGCGGGGGCCGCGGCATCTGCATCATGGGTTCATGCGCCTGCAACTCTGGGTACAAAGGAGAAAACTGTGAAGAAGGTAAAGGAGCAAATATTCACCCCAGCACCTGCTGCTGTTGGTTAGGTTTCCAGCTGGCATGTCTTGTTCTATCAGTGTCGCTTAGTCTGGATCATTTGCACTGGTAACAAAGGGGGAAAAAAAAGTCTGTTTTTCATTGAATCGTATACACTGGGATATGTTTGTTGCAAAGTTTTTCCTCCAAAATCA--TCTAATAATACTAAAAATCAAGTTTGGGAAGAGCTAGTACTGCTACAGAATTGTTACACTTCGCTTATTCTTAATCCATGTGAAAATTCCCCCCAA----CACATTTTATCTTTTTAC---TTGCCAGTTTTTACTTTCTTTGGCTAAGAAGAAAGCACCCAAA-------------AAATAGATGTCGGAGTACATGAAGACTGACTGAATTTTCAGAGTCTAGAATAAATCATTAATGTATTGCATCTGTTAGCCATCTTTTCCACCAACCACACTG-------TGGAAAGTGCTGATTCCAATGCATCACA--------GTGAAAAATGGCACGTCATTTTTGTATTCCAGAGATGT----GCATAATAAT---ATTCTTTCTGGTGTGCTGCAAAATGCAGTTCATTTTCTATTCTATTTTTTTTTTAGGGAGTAAAAA-GCGCCATTTTC-TTCCTCAATGAAATTGATTTTATTGATCTCCACGTACAAAGTAATGCAATTAAGTCCCTGGAATTAAATTTTCAGACCATTGACCCTACAAGTGTAACATTTTATTGAGTCAAATTGCTAAATTAAATCTCGTCATCTAAAGAACATTAAAGTGAATTAAGAAGGATAGAGAGTATGCAACTCATTTATTTCTGAAACAAGTTGAGAGTCCTGTACAGCTGTCAGAACTCTGTAGCTCTGGATTGGGTCAGCTGATACCAAGCATTGCAAGTAATCCAACTGTTGTCACACTGTGATTAGGCAAAATAGAGATCAGTAGCCCGAGACCTGAGGCCAATCTTGT---TGTACTTCAGAAAAATTAGCAAACTTTA-AAGGTTCTCTGTTAACTCAATGACAGCCTGTAAATGTCTTGAAGACGGTTACATCCACACATGGATTTCACGATACCAGAAAATGGTGTGGAAATGATATGTTTTTATG-AAGAAAATTGCATGTATCCTAACGGAAATTGG---CTAGGACTGGTAGTCAGAAATGAGAT-----AAAGGGTTCTTTGCCTTGTAGCCAGAGGAGGGAGGCTGAAACCAAGCTACTTTGGTCTGCTGTTCCTTTTCCT-CACTCATTGTAATGAGGCGAAAGAATTTCTCAGCTTCAATCTACTTGAAGAATGCAATGCTGCACGTTTCATAAGGTCCTAAAGTGCAGATTAAGCTAAGCAGTGCCACGAGCACCTAGTGGTGATTACTGTTGTTAGAAACAACATCTTCGAGCTGATCTTTCTCTTTTCCATG-CAGCGGATTGCTTGGACCCAGCCTGTTCCAGCCATGGTGTGTGCATCCACGGCGAGTGCCACTGCAACCCGGGCTGGGGGGGCAGCAACTGTGAAATCCTGAAGACACTGTGCCCTGACCAGTGCTCCGGCCATGGCACCTACCTTCAGGAGAGCGGTACCTGCACCTGTGACCCCAACTGGACAGGTCCAGACTGCTCCAATGGTAAGCGTTAA ......:.x.:-----.::::....x...:x...--.....:..x...................:.....:...........x..:.....:..:.....x...x.:..............x..x........:..x..:..:..:.......:::x..::xx..:...-.:..:...:.:::x...::....-..::.....---------------------:.x...xx..::..---------..:.::.....:.x:.:x::x:..xx.....---.:..x...xx:.....:-.:..:...x:x..::.xx....::..::.x...::..:.........x.....:..:...:.:..:..:....................:...........x....x...:....................:..:.....::.x..x.....:..:..:..x.....:.....:..:..x..:..:........:..x..:..:........x..:.............::...............x:x.:x.........xxx..:--------......---------------------------------------------------.:..:.x..:--------------:..:...x..x:...x.:.------:.x:.x.x:.x.x..::.x:.:.x..x:.x.xx:..:.:.:::...x..--.:.:.-------....x:..x....:x...----------...------......x:...xxxx..x.xx:....xx.---:.:..:xxx.x....----.x.x...xx.......xx---:..:x.:.:x..x....::..x:..xx..-.......xx....-------------...:x:.::x....--------x.::...:.xx.....-----...x-------.:xx..:.x.x..:...:x:.--....x...:.xx.:.x.x..:x:..-------.:.....-:.x..x.xxx.::...x.:.--------:x:.:..:.:xx..:....xxx...:.....x..x...----.:.....:..---.x..xxxx.:x::.:...:...:.....x.x.-----------...x......:..::..:.....-..:......:.-...:.....x...................x...::.....................:..................:.....................x:...........................................x.....:............................................x.....:xx....::...::............x....x..:.::x::....xx.-----------------..::.::x..xx...:xx..:.:..x.............:..:.....x..:...:.:..:....x.:.---.x.:...---....x.....:.......xx..x.:..:-...:x....x:...x..x....:..x:---------------..:.---------------.....:.:.----------------------------...:...xx..-.xx.x....x:x..:..::.--.:....:x:.---:.:::.x......x:.:.x..xx...-----...:x....------------------------------.xx:..::..xx..:.xx.x:x:...:....:..-..:x..:.:.:..-------------------------....x..x..------------------...x....----------------------------------------------------------------------------------:..:x....:..:.::.::-....x..:..:x.:.....x.xx.....:.::...........:........x..:..:.......::..:..x.....:..:.....:........x........xx....:..x.................:..x..x..:.....:..:..:..:x.......x........:........x..:...........x..:...:..-..... 11M5I18M2D133M1I23M1D9M21D14M9D31M3D17M1I267M8I6M51I10M14I19M6I49M2D5M7I18M10I3M6I29M3I15M4D18M3D29M1I13M13D14M8I16M5I4M7I21M2I25M7D7M1I20M8D38M4D10M3D32M11I23M1D11M1D247M17I69M3I7M3D28M1D27M15I4M15I9M28I11M1D20M2I10M3D26M5D9M30I34M1D13M25I10M18I8M82I19M1D209M1I5M 1245/1723 72.3% 2106/94230402 0.0% 480/1723 27.9% 129990492 60224063 +39533 chr4 + 190214555 182686491 182686490 182688530 2040 TCTTTTGTTGATGTG-GAAATGACCTTCAGATATCTAAATTCAATAAGAGAATAGACTTTACACCCGAAGAAACATTG-GTTAAGCTGCTAAAAGAGAA---GAAATGAATTATTTCCATCTGAA-AGTTTATAGGTTTGAAAGCAACAGAGCTTTCCTCTATCTTCAACAGCAGTTTGTTCATTAATTAGCCCTTCAATTCCACTTCAATTAAATTAACTCTAATTAATAAGTTCATTACAAAGATTGACGCACCTTGCTCAAAGCTAGTGTGCTAAATGCTGATAAACACCATCACCCTAATGAAAAATTGATTAGATTGAATAAAAAGGGTACCTCAGAAAGAACCCTCTCACTTCTGGAGCTGGGTTGATGTTATGTTGCTCTGAAGTTAATCAAACTATCTTGAATCTCTTAATCAAAAGTTTAATTCAAAGGAGATAGAAAATATTGCAT------GAAAAAACCTGCGT----------------------------------GCTACCCTCTTCCAGTTAATAGTCCTGGGTGTTGTTTATAAAAAATATTACAACTCTCGTAGTGCCTTGATAAGGTGTTTA----------GCCTGTGAGATAGAGAATCACGTGTCTGAGAAATGTTACCTGGGGAATGAATAGGGAAAACAGAACATGTGACTACATAAACAGCTACTATTTTTTAATCAAAAA----AAGGTTTTAGTACATTTTCTGTTTGTTAGAAATGATTTTAGGTTTTTATTGTTCAGTGCTTTAT----TTTTGTAAGAAAACCAAAACTAATCAATAGTCTTAGAATTTTAGGGGAAAAAACTATAGCTAACTTTAATCTTATATGTAAAAATGAAATAA--CCTTCAAAGTTTCTTTTACCTTTGCCTCT--CCCTGTCTCTCAATTGGAACTAGTTAAATAAAGCTTTTAAGAAAGCT---TAAAATTTTTTTTCTTACACATCTGAATTCT----TTTTAAAGACCTAACCTGGTATTAA---------AACATTTGAATTCATTTGGTC-------ACTTGT-GCTC---------TTTTCAGTAATTCTAGGAATTGAAAAACCTTGTT------TTTCAAAGGAGAGTCAATTATATGTATTATTAAACTGGTTTTGTA----------CTGTGGACTAAGAAATTTGTATCTGTCAACTGTACAAATTTACTGAATAGGAAAAACAGTTTCTTTTTACATGCA-------TGTC--TGTGTCAGAAGCAAGCTAATTTACTTAAGTA--GATTCCTCT-TAGTGAAA----GTTTCTGA------ATATTT------------AAAACATTTAAATGTGGCATTAGAAACAACCCCATTTCAAATTCTTGCCAT--ATGTATGAAATCCAAGTCCTGT-TAGA--TACCTGAGATGCTGAAATATTTCATTAATTTGGGGATGGGGGTGTGGGGA----CATGTTTTCTTGGTGATAGGTGTATATAAATATGA----CCACCCTCTATATATGTAATGTTTTCTATATAAAGTATTGTATATGTAAAGAAATTATTTCTAACAATTGTCATGTGTAT-TTTCTGCATGATTAGAGCAGCATGTAAAATTAAATG---ATGAATAAAGACGTAGAGTTC--CACCATTGATCATTTCCTAGTAGTCAGTGCTGAAATTTACGTAGCATA-CAAATACTTTTGATTT-CTTTTGGATGATTTTGTGTTTC---CCTTGAACAAATTTGTGTGGAAGATAAAA------GCTGCTTATTAATTCCCCTTCTCTCTCCCGC-----CACTCTTCTCTCCTGTTTTGTGTCCTCTTCCTCCCACA----TAGAAATATGTTCTGTGGACTGTGGCTCACACGGCGTTTGCATGGGGGGGACGTGTCGCTGTGAAGAAGGCTGGACGGGCCCAGCCTGTAATCAGAGAGCCTGCCACCCCCGCTGTGCCGAGCACGGGACCTGCAAGGATGGCAAGTGTGAATGCAGCCAGGGCTGGAATGGAGAGCACTGCACTATCGGTAGGCTTACTGCAAGTCTGTGTCTGTCCCCTTCCTCCCAGA---GAAGAGCACCGACGGTCAGCTGTTTTCAACTTGGAA------------AAAGCCTATTTCTTT---ACGTTAT-TTTTTACTTGTCTTTCT---TAACACGAAATTATTTTTTAAATATGGTTGTCATTTTATAATGGCAATTCAGTTCTTTTTAG chr4 - 94230402 52693009 52693008 52695121 41535282 41535281 41537394 2113 TTTTCTGAAGTTGTGCAAAATGACCTTCATACTGGCA----CACTAAAAAAGTAGATCTTACCC----ATAAACATTTTGTTAAGCTGATAGAAGAAAAAAAGGAATGAGTTATTTCCATCAGAGGAGTTTATAGGTTTGAAATCAGCAGAGCTTTCCTCTATCTTCATCAGCAGTTTGTCCGTTAATTAGCCCTTCAATTCCACTTCAATTAAATTAACTCTAATTAATAAGTTCATTACAAAGATTGACGCACCTTGCTCAAAGCTAGTGTGCTAAAAGCTGATAAACACCTCCACTCTAATGAAAAATTGATTAGATTGAAG--------------AGAAATAACCCTTTCTTTTTTGGAGCTGTGTTGACGTTTAGTGACTCTAAAATTAATCAAACCATCTTAGATCTCTTAATCAAAAATTTAATTCAAAGTAGATATAAAATGCTGTATAGGAAAGAAAAAGGGGGGGTGGGGGGGAGGGGAGGAGCAAGAGGGAGAAATGCAGCTGTCTCTCTCCAG-AAATATTC-----------TTATGGAAAATGTCACAGCT---------CCTTGATACTCTGTTTAATGTTCCACGGCATTTGA-AGACAGAGTTAT-CCTCTG-----------CTGGGGAAGAAA-----------------------------------ACCACTATTGAATAGAAAACTGGAAACCTTTCATGCGCTGAAAGCTGGTGA-AAATAATTTCAGTCTTTTATTGCTAAACTGTTTGTTGTCTTTTACAAGAAAA-CAAAACCAA--AATA----CAGTGCTCTTATGAAGCAGTGTGTGGTTACAAGCAGCTCAATGCCAAGGAACTGAAGAAGTCCCTCAGGCTACATTATAGCTTCTCTTTTTATTCTGTTGTCTGCTTAGCA-----GAAGTAAAGTTTTTTTGGAGTCTGACTAAATGAACTATAACTGTAAATGCAAAATCCAGCATTCTAAAT-TATCATCTTGTATTAGCTGAGACTTAACATGTG---TTGTTTGGCCTCTGTCTACCTGTGGCTCTTAACATATTTTTCAATTATTCTATCAGTTACAAGATCCTGTTACCATACGTAAATGACAAGTTAAATTGCTGTA-TGTTGATTTATTTTTTTAACAATCTATTATTTAAACCAGACTGTTCATAGCTGTCACTGATACAAATTTACTGAAAGTAAAAGAGAATCATCTTTTATATTTAACAGATGTGTCAGTATGTCAGAATAGTACTAATTTGTCTCAGTAAGGCTGACTCTATAATGAAAAAATGTGTCAGAAATGGCACATTTTTACTTGGAAAGAAAACAGTGAGCAGGGTAGGGAGGGGAAACCTTGTTAAAATGATCTTTCATTAATGCTAGATTCTCACTTGCGGCGTAGAGTGACCTAAGTGTACGGTACATTTAGTTGCT------ACAAGTGTGTTGTGACTTCCAGGAGCTTTAAGTGCCACATGATCTTAGTTATGAAAGGCTACTCTTAAGATGTGT-GTGATCAC------AAAAAATGTAATTGAACATTACTTAAAGCTAACAGATGAGCTGCGTACACTACAGCACCACTAAGTCTACCAGAGTAACTAAGTAAGCATTAACACGGAGGTAAAACTCTGCACCCTGCA-----TTCTATTGGGTCCTACTTGAAAATATCTTTCACAGTAAATTCCTTTGATTTAATTACCAAAGGTTTTGCCTTTCTCACCCTTCACA------TGCCGAAT-TAAAATGCCGCGCTGCTAATTGATGCATAACCTCTCACCCCCGTGTGCACTCTCTGCCTCTTCTTTCTCCCCCTCTCCCCTCTCAAATGCAGAGATCTGCTCGGTGGACTGCGGCACGCACGGTGTGTGCATGGGCGGGACGTGTCGCTGCGAGGACGGCTGGACGGGCGCAGCCTGCAACCAGAGGGCCTGCCACCCCCGCTGCGCCGAGCACGGCACCTGCAAGGATGGGAAGTGCGAATGTAGCCAGGGGTGGAACGGAGAGCACTGTACCATTGGTAGGCTGGCTATGCTTTAATGTGT----CTTTGGTACAAAATTCAAAGAGCTGGCACTGCTGGCTGTGTCTGAATAAGAAGTGTATAACTTTGAAGCTTTTTTTCTTCAAACAGAATATTTGCACGTGTCAGTCTGTGTAA-AGGAATTGATATTTTAAGACAGGAAATTGTTATATAATGGCTCATCAGGTCTTCATAG .:..:..xx.x....-:............x.:xxx:.----..x...:.:.:....::....x.----.x.......x-.........x..:....:..---.:.....:...........x..:-.................x..:.....................x...........:.:................................................................................................x.............x:...:.........................x--------------.....x......:..x:..:........x.....:...xx..x:....:..:..........:.....::...............:............x.....x.....::..:..------......:xxx.x..----------------------------------...::.::::.....-x....x..-----------....::.....:.:...:..---------........xxx......----------..x.x...-.x.x...:.:.:-:x....-----------........x:..-----------------------------------..:.:.x..x...x:....----..:x:...x:.:.::.xxxx.:.x..x.-....:....:..x:........:.x.::xx...:.----....::.......-......:..--....----:..x::.:.x:x.:.:x.:xx.:.:.:..xxxx:.::::x..::xx.::..:x:..x..--..:...::x.x:x..x..x...:x.:.:.--::....:x::::x..:.x.-----x..:.....:....xx.:.:x..---....xxxx:.x.xx:.::.x..x::..x..:----..:....x-:x.x.:..x......:---------.....x..---.::.....:.-------..:...-....---------......:.x......xx.:..:x..:.:.:....------:x.x..x.:x:...:..x.xxx....-.:..:.x:.:x....x..----------x.x.::..:.::xx:..::..x......x:x:...............x:x:...:.x.:.:x::.....:..x:.-------....--.:........xx:x:.......:::.x....--.x.xx....-..:.....----..x..x..------.:....------------......x.x.:xx.x.xx:xx..:::x....:::..xx..xxx::.x:...--...:xx..xx::..xx.x.x.:-....--x....:..xxxx:.:x.:....x:..:x.------.:::.x....x.x..----..x.xx:.:.x:...x:.x:..xx:x..:x.....----.:..:..:x.x..:...-:..x.:x.------..:x.x....xx..x.x.xx.x...xxx......:x..xxx..:...:-:.x.x...:x.:..::x.x:.xx.x:x..:...:.:---..x..:.x:..x...:.::..--....x.xx.-----.:...x.:.x:xx.:..x:..xx..:x.xx..:.-:....x.:........-x..x:x:.x.:.....:x....---..:.xx...------..:x...x-.....------......x...:..x.x:xx:.....x...x.-----......::x.::..x:...x.x:..:::...:.:.x..----:...:..x..:..x........:...x.:.....:..x........x..............:..:..x............x.......:..:.....:.................:...........x..............x.....:.....:........x.....:...........:..:..:........x:..:::xx.:x:...x.----.:..xx.x.x.:.---:......xxxx..x.:::.....x.:::.x.x:...------------:....:.x...::..---..:xx..-...x:..x....xx...---...-.x...x.x..x......:xxx..xx:.::..x.........xxx....x....:x... 15M1I21M4D23M4D10M1I20M3I23M1I199M14D117M6I14M34I15M1D8M11D20M9D17M10I8M1D12M1D6M11D12M35D19M4I28M1D35M4I13M1D9M2D4M4D59M2I29M2I19M5D23M3I31M4I8M1D16M9I8M3D10M7I6M1I4M9I34M6I26M1D18M10I75M7I4M2I31M2I9M1I8M4I8M6I6M12I51M2I22M1I4M2I29M6D15M4I35M4I17M1D8M6D48M1I36M3I21M2I9M5D34M1I16M1I22M3I9M6D8M1D5M6I31M5I38M4I214M4D13M3I36M12I15M3I7M1I17M3I3M1D58M 1307/1901 68.8% 2113/94230402 0.0% 351/1901 18.5% 129993482 60221073 +5862 chr4 + 190214555 182690650 182690649 182690818 169 AAAAGTTATCCATAGGCGGATTTAACTTACCAACCAATAGTTATTCAACAAATCATTTTAGTGTT-GTTCTCAGTGGCCTTGGTATTATTACATGGATAATAGTTTCCCATAGATGAGCTGTTCTTGAACAAATTTCTAGTTGT-TTAGGAACAAACAGGATTTTTATTAG chr4 - 94230402 52696846 52696845 52697016 41533387 41533386 41533557 171 AAAGCCTTTCCCTTGACCGCTTTAACTTGCCAACGAGCAATTACTCAGCAGATTGCTCTGCTGTTTGGTCTCGCTGACCTTGGCAGCATTTCAAGGGTTGCAGTTATACACGGATGAACTGCTCTTGAACAATTTTTCCGACATATTAGGCACAAACTAGTTTTTCCTCAG ...:x:.x...x.x.:.x.x........:.....x.::.:...:...:..:..:::.:.:x....-.x....:x..:......:.x:...x..x..:.x::....x:x..::.....:...:..........x...::x.x::.-.....x......x:.x....:x.:.. 65M1I78M1I26M 112/169 66.3% 171/94230402 0.0% 2/169 1.2% 129993804 60220751 +35268 chr4 + 190214555 182700524 182700523 182701193 670 TTTTTGTCTGTTGCTCTTCATGATAAGTTCAGTGACCCTCTCTTTTTTGAGTGCCTCTTTAATGAAGCTGGAACCCAGCTGTCTGAAATATGACTATCATTTCTGG-GATTTAACAGGCATGTACCTTGGATAAATTAAGGAGCAGTCAAAGGAGGTCCATAAATTTGAATACTTTGCCAGCTGCTTTTCCATTAAACTCTGTTGGTTGAATGAAATTAGTAAATAATTATGTTGGTGGGGAATCTACTACATCTAAATGTG--ATATAATGTCTTCCTTTAACAACAGAGCTTAATTTTTCTTATATACTAAATTAGTTTTTAGGGTAATCTACATTGCAAATTGGTCAATTTGCATCAAAACTATGCCTAGTTGTTCTGATTTGTCAACACCTCTTTTTAAAAAAGTCTTTAACTTTAAGCATGGGTGGGTAAGACCATCTGCTTGTAGAGCTCGCCTGCAGCTCCACCACTTAGTGCACGAGACAGGTTACAGCTGCTTAATTGTTATGGTGTTGAATGATTACCATTCTGTCCAAAATTAATATTTATATATGTGTCCACAGAAAGCATGTGGTTAAACATAAGCAATCTAATTGTGAATTAATGACATAAGGTATTCATTAATGAGTCCCCACCTGAACAATAAGGGGTAAAATAATGCTTTTCACAT chr4 - 94230402 52699262 52699261 52699928 41530475 41530474 41531141 667 TCCTTTTCTATCCCAGCTTGCAATGAGTATGGTGACCCTCTCCTGTCTGAATAGTGGTTGTGTGAGATTGGAATGGTATTATTTCAGAAA-GTCTATTATTTTTTGTGATATAACTGGCATGCACCACGAGTAAATTAAGTAACTGTCATAGGAAGCCCATAAATATGAATACTTTTCCAGCTGCTTTTCCATTAAACTCTGTTAGCTGAATGAAATTAGTAAATAATTATGTTGGTGGGGAATCTGCTATATACCCATGCGCTGTGTAACATCTCAGTTTTATAATGCAGCTTAATTTTTACCATAGACCAAATCAGCTTT-AGAGTAATCTAAATTGCAAATTGGCCAATTTGCATTAGAACTATGCCTTCTTGTTCAGATTTGTCAACACCTCTTTTTTAAAAAGTCTTTAACATTAAGCATGGGTGGGTAAGACCATCTGTTTATGGAGCTTGCCTGCAGCTCCATTACTTAACACATGAGACAGGTTACAGCTGTTTAATTGTTATCATGTTGAATGATTATCTTTCAGTCCAAAATTAATATTTATAGATGTATGCATGGAAAACATGTCGTTAAACATAAGTGATCTAAATGTGAATTAATGTCATTAAGCCCTGAT--ATTAATCCC--TCAGGACGGCTAAAGTTAGCGTAGTGGTGTTCATGT .::..x...:.:x.xx:.::::..:...x::...........:.x.:...:.:x:xx..xx:...:::.....:xxx::.:.:.x.:.x.-.x....:....:.x.-...x....x......:...x:.::.........x.:.x....x....:.:........x..........x...........................:.:.......................................:...:..x:xx...:.--:.:...::...:xx...x.:..::x............x::...x..:....:..:...-..:........x............:..........:.:..........xx......x.....................x..............x...........................:..:.:.....:.............::.....:::..:.................:...........x:.............:.x...x....................x....:.x..::....:.....x............::......x............x...x.:.:x:.x..--..x.:....--:.x.:..:::x.::.x..:x:..:..x.x....::. 90M1D15M1I155M2I58M1D301M2D9M2D36M 511/664 77.0% 667/94230402 0.0% 9/664 1.4% 130001262 60213293 +12854 chr4 + 190214555 182704977 182704976 182705330 354 GTAAACTCTTAAGAATATGTAATTGTTTTATGGTGTTTAAAATTATGTCACTGTCATAATCCTTTATGGTATGGTAATCAGTAATAAAACATTGCAGTGAGCAGCAGTTAAGGAACATCAAATCAATGGGTGTGCACCTTGCACGCTGATTTAAACAGTTGCTGATTGGAATAAGTGGATTTAATATGTACGTATTTGTAGACTGTAGCTTTTCTGTCAT-CCTGCAGGAATTGGTACTTGACTAATCTGAGAATGATACCTACTTACAACTTTAATGAGGTACTAATGTGAGTCATTTTTT---------AAGTCCGTGTTCGGAAGTATTATGAAATGCTCAATGCTAACTAAAAATCTGCC chr4 - 94230402 52704739 52704738 52705088 41525315 41525314 41525664 350 GTAAACTAATAGAAATATGAATTCGCTATACAGTATTCAGGAAGGTGTCACTGTTATAATTCTTTATGACGGAATAATCAG-AATAATGCAGTGCTATAAGTACCAATTAAGGAACATCGAATCAATGGGTATGTGACT--CATGCTGATTTAAACAGGAGCTGATTGGGATAAATGGATTTAATATGTAC----TTTCATTCTGTGGCTATTCTGTCATACATAGAGGAAGTAGCATATGAATAATCTAAGGGAGACAC-------TGACTCTAGTAGGCAAGTAATGGGAGACATTACGTCTAAAGAAAAGGTCTGGGTTCTGACTGGTTATGAAATATGCCATGTTAAGTTTGAATTTGTC .......xx..::......x.x.:.:.x..::..:..:.::.xx:.........:.....:.......:::x::.......-.....x:..x...x:.:..:.x..:............:...........:..::x..--..:..............xx.........:....:................----..x:.xx....:...x.........-.x.:x.....x.:.:.:x...x......:..::x..:..-------::...:..:.::.xx.x.....x...x....x:x.---------.:...:.x....x..xxx:.........::x.x...:...x.xx:...:..:. 81M1D57M2D50M4D25M1I39M7D35M9I53M 242/340 71.2% 350/94230402 0.0% 24/340 7.1% 130000238 60214317 +108627 chr4 + 190214555 182711374 182711373 182714247 2874 TTTGCTGGAATCATGACTACATTTGCTAAAAATGTGAATAGACTGGATTTTTAGGAGATACGAAGTGCATCTCTGTCATGTGATGTGAG---TCTTATGTCAGCTGAAGCT-ACTCAATTTGCATGTAGATTCTGAAAATTTTCTTGTCCCATGTGACACTTCTGAAATGTCTGTCTGTTCTTTTTTCCTTTTTAATTTCCCAAGCTCACTATTTGGATAAGATAGTTAAAGGTACTGTATACTCGCTCTTTGTTGACAT------ATCTACATATATATCTCTATATAACTGTATAT-----------CACTAGGTTTG----ACAATAGACTTTTCCATGCATATTTTTGTAAATTATAAATCAGAGTTAAATTATGTAAAATGCCTTGGATTTAAAGTATTGAGACTTAAGTGTCTGTGTCTCATTTTTATAATTT-TGGGTTATCACAGATTTCATT-----CTTTGTAAAAGCGTTAGTTTTCTCTAGAACCAGAAACTGAAGATAATGGTACATTTGCTGTTTTTTGGTTTTGGAGGTTTTTTTCTTTCTTTTCTTTTTTTTAAGATCTTCACTGTTGGCAATTCAGCTTAATGAGCTTTAAATTCTAAGCTAAAGAATCACA--AATACTCTTATCACAGAATAAGAAATTGTCAAT----CTAAAGAAGATCCTGGTTA-----------------------ACATGTTGAGAGAAATTTCGTTTATTTCATATGGAAGCTTCTTTGGTTTTTTTCCTAAATGTTTCAAAATATATGTGGTATCACAATTTGTGTTTTGTT----ATTTTTTAAAACCTATAAATACTGTACAGTCTATTAAA--AAAAGAACTGATAACCT---TGTTCAGCAGAAAACAGCA--GATTCTCACATCTTCAGTTATCGTAGAAATAGATG-----GAAAAAGTTTTTTCAGAAGAGAAAATTCCCCTTCCCTTTCTCCTCAGATTACCTACTTTCTATTCCTTGTTTGTGCT-----TTTCATTAGAATATGAAAATATTCATGGCAATATCCAGGCTTTCATATACCAACTCCTACGTGCAGTCAGTCAGCTGCCGCACCTCCTTGTCAGTGGGGCAATTCAACCTTTC-GTTTTCATTAAAAAAAAAAAAAAAAAAACACATCCATAAGGAAGATTCACCTTTTATTTATTGAATAATCCATAAATACAGACGGTAATTG---TCTGAGCGAAAAGAAGCAGCAAAATTAATCTCTTCCTGACCTGATGGT----ATCCATAAGTGTAATTTCATTGTACTCTTCCATGAGAGACAGTCGAAATAGTCTTCTTTCTGTTAACTCTAATCTTAAGAGACAGAATGTCTCTTGGCGATATTTTCTTTTCAAG---TTCCACAGTGGAGGAGGGGACACCAATATATGAATAATTCTTCTAACACAGACTTAAACATCTTTAAAAACAGATTGTTCC--CTGAAATTTTGTC------------------------ACCGGAGCAATAGTAGCATTCAAATGATAAGAAGCTGTAAAACAAACCCCAATTGCTATAGCAAGT---ATTTTTATTAATATG-TTTTATACCAAATTATAAATAGCTCTGTCCACAGAAATCTGATGAATAGCCAGTTATTC-TTAGAATTTTAGAGC-ATTTCTCTCCTTGCTTCTGTCAGTGTCATATCACACTCATAAACAAGGA-CACCAGAATCTACCCA--------AGTGTCATCCTCATAAACAGATCACATTGGCTGCATGCCAGATATCATCAGTAGGAAGTGGCAAAAATTGTT---TTTTTTAAATGTCATGTTAGACTGAAA-CAATTATAGATTTTGGATATAT--TAAATTATTTTAATTGTTTCCCAAATTTTCCCTCCTTGCCCATAAAAGCAGACAAGATAGGATATAAAGGTAACAGCATAAAAGCCTTAGGGAGATTGTCACAAAATATCACTCTTCGCTATCTGTCTTGAAGCACGTCACTACCGTGTTTTTGTTCAGTCTATCAATGTTTTATTGTGGTCCTTATGGTATTTCATTTTGTCCGTCCTAAGTAATCCAATATGCACAGCTATTACATTTAGTTGGAAATCCTGTCGGTCCTGTCCCATCCGTATGCAGCCTGAATCCTAATGTTTGTTAGAATAGATGCTAAGCTGCTTCACTATTTCCTGGGCTTTGCTTATTCTGTGACAAGGAATGTACTCTTGGCATAAAGTATAGTCATTAATCCTGGCCTATACTTTGTGCAATTATTTAATGCACTGTAATTTCACATGAATGTACGGCAACTCCGAGGCCAGATAAAATTAATGTTCTCTTTT-TGACATCATTCATATCCTCATACCCACTTTCATGCTTTTGGAGTTTGAGGGAATTTTTTTAAGCAACAAGGTGCTTTAAGAAGGCATGTCTTGATAAATGACCAGTAATGTTTAAAACAGATTACAAATCTAGACTAGGGATTCTGAA------ATTATTTTGTTGAGATGGCTTTTCCACACCGTACAATATAC----CTTGTTGCTTGGCTAAAGGGAAAAAA---------------TTTAAG-----------------------TTAATTTTGTCTGGCCTGCAGCTATTTAGTGGATCGTTGCATATATTTCTGTCCTGCACAGGTAAGTGGTGTCTCAAGGGTCAGGCCAATCAAAGATGCCACTTGGATAAGAATTAGATTCCATAGATAACGTTGCTGTTTCTATCCATGTGCAATTACAGTATTTGTGCTGTTTATAAAGGCCTGTTCCCACTAAGTGTCCCTTATCTGTTTATTTTA----GGTGCAAAAACT-CAATACTCAAATCACTGGTGTTTTCCTTCTTTGTC----TCGACAGAGGGTTGTCCTGGTCTGTGCAACAGCAATGGAAGATGTACCCTGGACCAAAATGGCTGGCATTGTGTGTGCCAGCCTGGATGGAGAGGAGCAGGCTGTGACGTAGCCATGGAGACTCTTTGCACAGATAGCAAGGACAATGAAGGAGGTAAGAAATACTGA chr4 - 94230402 52707260 52707259 52710191 41520212 41520211 41523143 2932 TTTCATTGAGTCATGACTGTGTTTGCTGAAAA-GAGAATTTCTTGCATTTTTAAAGGATGAGAAATACATTTTCATTCTGTAATGTAGGACCTCTCACGTCAGGTGCACCTTGCTTGATTTGCATGTGAATTCTGAACAATT-CTTGTTTTATGTGACACTTCTGAAATGTCTGTCTGTTTTTCTTTTCTTTCTAATT-CTCAAGCTCACTATTTGGATAAGATAGTGAAAGGTACTGTATATTTGCTCTTTGATGACATGCCTATACCTACATGTATTTTTTAATATATCAATATATAGTGGCAAACACTCTAGATTGGCAAAATAATCGTCTCTTACATATAT---TCCATGGATTATAAATTTAACTCATGCTATTTTCAACTCATATGATTAAAAAT---GAAATCT---TGCTTATGTTATGTCATGACATTTTGTCAGTTATTATACATTTCTATATGAACTATATACATGCATTAGATTTTGCTTGAGCCAAAAACTGAAGATAGTATT-CATTTGCTGTTT------------GGTTTGTTTCTTTGTGAGTTTTGTCATTGGATCTTTACCTATAAAAA------------AGA---AAATATTTAGGAAACAAAGCAAAGCAAAATTCTTGCTATAAAACAAG----TGTCATTAGTTCCAAAGAACATATTAATTATAGATACGTGTGTTTATATATAGACAGATCAATAGAAATACCCAGGATTTTA------AGCTT------TTGTTTATCTGAATGCAG-AAAATCTATAGAGAATTATGACTTGTATTTTGTATGAAGCTAGAAAAAGCTTGTATACTCCATACAACATTTTCAATTGAAAGGGTCAAGGATTTAAATACTTATCACGAAACAGCAAAGACTCTTGTATCTTCAGTTATGGtaaaaaaaattatttaaaaaaaaGATGTTT------AAAACATTCCTACCCCCTCTTTCC-CTGAGTATCT--TCTCTATTCCTTATTTGTATTCTTTTTTTCATTAGAATATGGCAATATTCATGGCAATATCCAGGCTTTCATACAATAAGTCTTGAATGTACCCAGTTGACTCCTAAAACATTCTGTCAGTAGGGGAATTAAATATGTAAGTCTTCCATAAATTAAACCGAAGAAACAT-------TAAGGGAAAGATAGCTCTC------TGTATG-TCAACAAATACAGTTAGCAGCTGCATTCTGAAAGGATAAGAGTAGCAAGACTAATCACAGCCTGGCTTGGTGGTGCGCAACCGTAACTGTAGCATCACCATGCTTCCTCACAAGAGGCTCTTCTGAT-----TCTGTCTTCTAAGAGTAATTTGATGAGAGGTAAGCACTCTTAGTAAGTTTTTC----CAAGAGTGTTTATAGTTTGAAAGGAG---TCTGTAAATTCAAGATTCTTTAGA---AGA-------------AAAAAGAAACTGTTCCTTCTGAAGTACTGTTCTAAGCTCAACTAAGTTTAACCATAGCGAGTCAGTAGAGCAGTTCACAACAACAGCGGTTCTAGAAAGAG----AAATGTTTTAGCCACTTAGCTTTTTTTTAATATAAGTTTACA-------GGAAACAGTTGTGTCCAAAAGTA-CTGATTTCTAGCCACTTTCTCATCAGATACTTAGTGCCATATCTGTTCTTGCTTCTGTCAGTGTCTTATCATAGTCACAGATAAGGAACGCCAAAATCTACATATTTATAGTGTTGTCATTCTCATA--CAGATCATGTTGGCTGCATGCCAGATTTCATCGCTAGGAAGTGACAACTACTGTTATTTTTTTTTAATGTAATGTTAGACTGAAAACAATTATACATTTTGGatatatattaaattattttaattGTTTCCCAAATTTTCCCTCCTTGGCCATAAAAGCAGACAAGATAGGATATAAAGGTAACAGCACAAAAGCCTTAGGGAGATTGTCACAAAAAATCACTCTCTGCTATCTGTCTTGAAGCACGTCACTACCGTGTTTTTGTTCAGTCTATCAATGTTTTATTGTGGTCCTTATGGTATTTCATTTTGTCCGTCCTAAGTAATCAAATACGCACAGCTATTACATTTAGTTGGAAATCCTGTTGGTCCTGTCCCATCCGTATGCAGCCTGAATCCTACTGTTTGTTAGAATAGATGCTAAGCTGCTTCACTATTTCCTGGGCTTTGCTTACTCTGTGAAAAGGAATGTACTTCTGGCATAAAGTATAGTCATTAAAACCAGCCTATACTTTGTGCAGTTTTTTAGCGCACTGTAATTTCACATGAATATACGGCAACTCTGAGACCAGATAAAGTTAACATTCTCTTTTATTACATGCCTAAAA----CATACCCTCTTTCCTACTTAATGATTTGGAGGGATTTGTTCATAGTAACAGGGAGTTTCAACA---TTTGTGCCAGTAAAGAACCAATACTGTAGAGAGCAAATGAC-GATCAATTCTGTGAGCACAGAAAAATGTATAATTTTATACAGCTGTGTTT--------GCACAATGCACTCATCTCGTTACTCTGCCaaaaaaaaaaaaaattaaaaatatttttttaaaaaattaaaaagttaaaaaCAAACTTAATTTTGTCTGGCCTACAGGTATTTAGAGGATTGATGCATTTATTTCCTGCCTGTACAGGTAAGTGGTGTCTCAAGTGTCAGGCCAATCAAAGATGCCACTTTGTTCAGAATTACGTTCCCCAGGTAATGTTGCTGTTCCACTCCATGTGCAATTACAGTATTTGTGCTG-TTAAAAAGGCCTGTTCCCAGTAAGTGTCCCTTGTTTGTATCTTTTATTTGGCTGAAATAATTGCAATATTTAAATCACTTGTGATGTTCTTCTTTGTCTGTTTCGACAGAGGGTTGCCCCGGCTTGTGCAATAGCAATGGGAGGTGCACACTGGACCAGAATGGCTGGCACTGTGTCTGCCAGCCAGGATGGAGGGGAGCGGGCTGTGATGTGGCCATGGAAACTCTGTGCACTGACAGTAAGGACAACGAGGGAGGTAAGATACGCCAA ...xx.x..:........:::......:....-.x....xxx:..x.......:::...:x...:.:...:.:::.:x...:....::.---...:.:.....x..x.x..-:..::..........::........x.x..-.....:::.............................:..:...:....:.....-.:..........................x..............:.:........x......------.:......:...x.:.:x.....x.x:.....-----------.x....:..x.----.:...x.x..:..x...::..---.:::.::.........:x:.x.:.x::...x.xx..:x.x.xx....x...:.---..:.::.---..::.:...:x::.:x.x.:.x...-.x:.....:.:.x.....xx.-----..x.:..x.x..:....x...:x..x..:...:............:.:x.-............------------.....x.......x.xxx:...x.:x.x:......:..:xx.::x..------------..x---....x:.x..xx..x:..x..x.--..x.:....:::.:.:..:...----.....x.----.:......x..x:.::...-----------------------...x:.::.x......x:.xxxx....:.------.....------..x...x:..:....:xx-.....x...:x:.x..:.::.:....:......x----::.xxxx...:.:.:..x.:x.::....::x.x..x..--:....:::::.x:.::.---.::.:.x..x:........--..:...:::............x...:...x.:x.:-----:......x.x...------.:..x.....:x::....:.:...-.x..x..:..--.:..........:.....::.-----...............:x..............................:.x:..x..:.:x:..:.x:....:::..x.::x.x.x:::.......:...x....x..:x.x.x-..:...xx....xx...xx:..:...x.:-------.....:.:.xx:.x..:.:------..x..:-..x.:........x::.:.::..---.....:x.:.x.::..:.....:.:.....x.xx....:.:..:....----.x..:...x....::x...:::.:..::::..::....:.xx.:xx:..-----...x...x:...xxx....:.x.x....x:x..xxx.....:.::.xx.....----....---x.::.:...xx:::...:.---:.x:..x..xx.x:......:x:.---...-------------.....x.:.:......--.....:.x:...:------------------------.x..::x..:...x:xx:....x.xx.xx..x:.:.x..:..x:.:----..x..:.x....x.x.---x.....x.......:-x....:.-------:x...:..:.x......x.::x.-.....xxx......x..x:..-.:...xx:....x..-..x...x.:..................x.....:.x...:.:.:.....-.:...:.......x:.--------:x......:......--.......::.................x.....:x.........:...xx.:....---......x.....x..............-........x.............--......................................x.......................................:...........................x........::....................................................................................................x....:................................:..................................x....................................................:.......x............::......................xx.::................:..x....::.....................:...........:...:.........:....::.........-.x....xx:.x.x.----.......x.....x.:...xxx..x..x......x..x..:xx..:....:..x.:..:..x.---:x...x::::....x:....:..x...xx.:.:..:..x..-:...x.xx..:x.:::x.x...------..x.....:.xx..x..xx...--------.:.....::..----..:...:..:x..:...:::......---------------.....:-----------------------.................:...x.......x....:.x.....x......:xx....:.....................x.........................x.x.x.......x:....x:..:...:.........:.xx............................-...x...............x............:.:...x.x.....----.x..x..x..:.-.....:.:........x...x.x.:..........----..............:..:..::.......:........:..:..:..x........:...........:.....x........x........:.....:........:..:........:.....x.....x..:..:........:..:..........x.::.::. 32M1D56M3I19M1I30M1D55M1D61M6I32M11I11M4I21M3D53M3D7M3D25M1I21M5I50M1D12M12D47M12D3M3D23M2I22M4D7M4I19M23I29M6D5M6D18M1D34M4I38M2I17M3I19M2I35M5I13M6D24M1D10M2D21M5I113M1I29M7D19M6D6M1D23M3I48M4I49M5D53M4D4M3I19M3D24M3D3M13D16M2I13M24I46M4D16M3I15M1I7M7D23M1D21M1I15M1I49M1I16M8I15M2D55M3I27M1I22M2I482M1I14M4D63M3D41M1D22M6I22M8D11M4I26M15I6M23I172M1D46M4I12M1I35M4I168M 2072/2735 75.8% 2932/94230402 0.0% 336/2735 12.3% 130004114 60210441 +30244 chr4 + 190214555 182724045 182724044 182724711 667 CAGTATGATCTACTTTACATCAGAGTACCACGTAGACTGCAAAGCCTAAACAGAAGAAAGACAGGCTCTTAA--CTGATCACTGCAGTTATTATTCAGCGGGTTTTGAGCATTTCTGATTTATGTAGATTTTTATGATTAATGCTATTAGACATGGCTTCTATACC----AAGATAAATTTAAGCCAA-CCTAATATTCCTGAAACTAAAATGGAATCTCGATGATTTTTGAGA-AGCTATTCCACAAAGACAATTTTACTACACTATACATTTGGGCAAGTGGGTAATCAACTTAGTTAATACTACATAACCTTAGCTGCCGTATAAATACAGACCAAAAAATGAAAAATGTTTTCTCAAGTTATAGGAAGCCAGATTCATAACCATCCGTCACTTGCTTGGGCAAGTTACTGATAAACTCTGCAGAAGAATAACAAACAGTGTGTCCCTGCACCTTGGCTGTTGAAAATGAGAT-CTTTCTCTGATTGATGTTAGCAGAGAGGCTTGTAAAAATGCATTTCCAACTGATTAGTTCAGAAGGTGTCAATCTCATGCAGTTTTATGACCTGCAGACTACATGCCAGATGTACATTTGCTTTTTATAAACTAACAAAGATGAATGACTAAATTTGAGCATTCCTCTTTGGCAACTGTACCATCTATTGCCTAAGGGA chr4 - 94230402 52713736 52713735 52714382 41516021 41516020 41516667 647 CATTATG-TCTGCTGTATATAGAAGAACCACTTACA-TCTAGAACAAAGAAAAAAGAGAAATAGCCCCCTGAGGCTGA------AAATAATTGTCCAGCTGGCCAGGAGAGTTTTTATTTTCTGTATAATTTTC---------CTATTGCATTTGAGTGATGTAACTGATAAGCTAGTATTAAGCTAAGCCTCATATTTTTCAGGCTAAA-TGCAAT-TCATTGATATTTCACAGAACTTTCTCAGAAAGGAAATTCTACTGTGCTTCACACA-GCGCAATAGAGTAGTCATCTTAGT-GGTACTAGATAGCTCTAGCCAC---ATAAGTACAGGG-AAAGGATGAAAAATGTTTTCTCAAGTTATAAGGACCCAGATTCATAACCATCCGTCACTCGCCTGGGCAAGATGCTGATAAACTCCACAGAAAAATAACAAACAGTAT--CCCTATATCTGGGCTGGTGAAAATGAGATTCTTTCTCTGATTGATGTTAGCAGAGAGGCTTGTAAAAATGCATTTCCAGCTGATTAGTTCAGAAGGTGTCAATCTCCTGCAGTTTTATGACCTGCAGACTGTACTCCAGATGTACATTTGCTTTTTATAAACTAACAAAGATGAATGACTAAATTTGAGCATT--TCTTTGGCAACTGCACCAGATATTGCCTGGGAGA ..x....-...:..x..:..x::..x.....x..x.-.x:.:.:.xx.:.x.:....:.:.:..x.:.:.:.--....------x.:.x...:.:....x..::xx...x:...:.:x...x....x.x....x---------.....:x.:x..:x.xx.:..x.----...x..:xx......:..-...x.....::.x.::.....-..x...-..:x....x...x.x.-.:..x.::..x....:x....:....:::..x:...:x-.x....xx.:...:...x......-::.....x...:.::....::.---....:.....:x-...::.........................:.:.x........................:..:........x.:...........::.....:.............:.--....::.:..x.....x............-................................................:...........................x.......................::.:x..........................................................--.............:....xx........::.:.. 7M1D28M1D35M2I4M6D50M9D23M4I18M1I21M1D6M1D16M1I38M1D24M1D22M3D12M1D108M2D29M1I163M2D34M 504/638 79.0% 647/94230402 0.0% 38/638 6.0% 130010309 60204246 +3499 chr4 + 190214555 182725583 182725582 182725651 69 ATTTATATGAAATTTCCAAACTCAGTTTCATTTGATTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTCT chr4 - 94230402 18264986 18264985 18265054 75965349 75965348 75965417 69 ATTTAGGTGAAATTCTCAAACTCTGTTTCACCTTGCTCCATTTTTTTTCTTTTTTTTTTTGTTTATTTT .....x:.......::.......x......::.x::.::x....:...:....:......x...x..:. 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 164460597 25753958 +66536 chr4 + 190214555 182728951 182728950 182731152 2202 ATTTCTCTCTACAGATGGACTCATTGACTGCATGGATCCCGATTGCTGCCTACAGAGTTCCTGCCAGAATCAGCCCTATTGTCGGGGACTGCCGGATCCTCAGGACATCATTAGCCAAAGCCTTCAATCGCCTTCTCAGCAAGCTGCCAAATCCTTTTATGATCGAATCAGTTTCCTTATAGGATCTGATAGCACCCATGTTATACCTGGAGAAAGTCCTTTCAATAAGAGGTTAATG-----CTTCTTTTCCATATGTAGATTTGTAATGATGTTATCAACAGTTACATACACTTATGTGAAATACTCA---------------TGACTGTGAACCTGAGGAAAGTGCTGTTTTTTAAATACAGTTTTTCCTCTTTCTGCAGATTCTTCACCAAACTTTGTATTTCAAGCATTTTTGACACAGTTCACAT----------ACTTTGTCAATTTCAGTACCTGAGACAT-------AACAGGACATTATATTAAAGAGTCAATAAATCTTCATTTAACTAGTTGATTTTG-TTAGCACAGTTGGAAATGTTTCAAAAGAAGCAGTGAAAAGACCCCAAAAGGCAGAACAGAAGTGCACTTTTTTTTTTTTAGCTGAGCTCACTAAATAATATAAATTATGAATGAATGTAATGGAACTGCTGACGGCATGGCAGTAAGATTGCATAAGCTGTTTGACTGGTGCTTTGCAGAGCAGTAATGACCTGAAAGTAAAGCAGTAAGTGAAAGCAGGTGTCTTGTGTCTCACTGAGCAAAAGAAGATGATTTACACCAGAACTCCTGGGTCTGCAGTAATTTAACAGCATTAATGCAGTTATAGCCAGCAGTTGATTCAAAGTTGCTGTACAAATGTTCCTTATCGCCCCCTTAAATCTTATACTTCTTGGTCCCTGAAGATTTACTGATTGCCTCAGAATTAATTGGAAAGTCTACTTTTCTTCATGTGAGCACCATATATATGACTTATGAAAAAAGCACAGAGTTTAT-CATTTTAAAAATTCATCTCTAAATTATTAGTCTTGATAACGCTCCA-AAAAACAGATTGCCACAAATTAA----AACCCAGGATAAACACAA--GCCCTTTAGAGA-------ATATGCGT---TACACTGAATTAAAAGGGACATTGTCTTGGGAGTATT------TCAGGTCTGATTTTTGTGAATAACGATGGATTGCATAGCATAGTGTTATTT-TATCCTTAGGTTGAATTATCTATAAATCATGATAATGTTGGCCTGAAAAGACAGATGTTCATTCTCATTCTTCTGCTTTTCCAACAGCCTTGCATCTGTCATCAGAGGCCAAGTACTGACTGCTGATGGAACTCCACTTATTGGAGTAAATGTCTCGTTTTTCCATTACCCAGAATATGGATATACTATTACCCGCCAGGACGGAATGTGAGTTAGTCCCATCACACTATCT----CTGAAGGATTTGAAATATAAAAACTAGACCTTCCTGTACCACTGTCATGTTTGACTGTCCTTTTAAATATGGAAATGCAGCAACTTTTTAGACTCTACAAACTTGTGACAGTACATATGGCAGAGATTTAAAGTCATATACTCACATACTTCTTCAAAAGTTGATTTTATTTTCTAAGGCATGGTAATACTGTAGTTTTGTAGGAGAATGCTCTTTGTCTCAGCAGATGTATGTTGAAATCTTTAGGGGTAATATTTTATAATGTCTGTAACTTGAGCTCAGATGGTTCCGAGAAAAGAGTCAATGGAAAGCAAATTTGGAAAAAAAAATTGGTGAACTTGGTGAA--TACACATAGGACACAAGAGTATTTATTGT-------ATAACTCTTGGAATATTCCCATAGATCTGAAAATATTTCATATAAAAGTTGGGAGAAAAAGTTGATTTTCTTTATAAAGCATATTAACTTAAGGAGG--------TGTGTATTGGTAGTTATGTGGGATCCAGACAATTCACT---AAGCATACCTTGTTCTTTCTTAGGTTTGACTTGGTGGCAAATGGTGGGGCCTCTCTAACTTTGGTATTTGAACGATCCCCATTCCTCACTCAGTATCATACTGTGTGGATTCCATGGAATGTCTTTTATGTGATGGATACCCTAGTCATGAAGAAAGAAGAGAATGACATTCCCAGCTGTGATCTGAGTGGATTCGTGAGGCCAAATCCCATCATTGTGTCATCACCTTTATCCACCTTTTTCAGATCTTCTCCTGAAGACAGTCCCATCATTCCCGAAACACAGGTAAAATATTCTC chr4 - 94230402 52716689 52716688 52718736 41511667 41511666 41513714 2048 ATTTCTGCCAACAGATGGGCTGGTTGACTGTATGGATCCCGACTGCTGTTTACAGAGCTCTTGCCAAAATCAGCCTTACTGTCGTGGGCTACCTGATCCCCAAGATATTATCAGCCAAAGCCAACAGTCACCATCTCAGCAAGCTGCCAAAGCATTTTATGACCGTATCAGTTTTCTCATTGGAGCAGACAGCACTCATGTCATACCTGGGGAAAGTCCTTTCAATAGGAGGTAAGTGTGACTCATCCTTTACTCGTGCATACTTG------------AAGCAGTTGAAGA---GTGTGTGAGGTGCACAGTAGAAGATCCATTGTGATCTTTGTCTTCATGCAACAGACTCTCAGCAAAAGCATTTTTTCCCTAATTATCAGATTATTCA------TGCTTATCTCA----TTACCTGCAAAATTCAGATTGTTGGTGCCACTGGGTTACTTACCGTACATGGTACCTGTATTCTAACCAGGCACTTCATTAATGATTAAATAGATCTTTATTTAACCAGTTGATTTGGGTTAGCACAGTTGGAAATGTATCAAA----GCAATGAAAACACTTCAGAAGGAAAAGCAAAGCTGCACTTTTTA------AACTGAGCTCACTAAATAATATAAATTATGAATTAATGTAATGGAACTGTTAAGTGCACGACAGTATGATTGCATAAACTATTTGACTGGTGCTCTGCAAAGCAGTAATGACCTGAAAATAAAACAGTAACGGGAAGCAGGTGTCTCAGATCTCACTGAGTGAAAGAAGATGATTTACACTAGAACTACTGTGTTTGCAGTAATTTAACAGCATTAATGTGTTTGGGCACAGCAGATGATTAAAAGTTGTTGCTCAAATGTTCCTTATTGCTCTTTTAAATTTTGTACTTTGTAGTCCCTGCAGTTTTACAGATTGCTTTGA---TAATTGAAAAGTACACTT---TTCAAGAATCTGCCAGAGGTATGACT--TGCAGAATGTTTAGAGTTTATAAATTCTTAAAATTCTTCAGTGAATTACTAGGCTTAGTA--GCTCAGTATGGACAAAATGAACCAAAGCGACCTCAGCCAAATGAAAACAAAATTGTTGTATGTAGATGTTGAGGTATGTGTTTATACAATGTAAATTATGTGAATTTG---TGGAAGGGTTGGAGGCTCAGGAATGATTTT----GCTAACGGGAGCTGATGCCGTGCAGAGATGTTTGTGTGTGTTTGCTGTACTAGCTATTATTCATTCAAAAGAGAATTATAAAAGCCAAAT-TTGTGTCTGATCCTGCATCTTTTTT-ACAGCCTTGCATCTGTCATAAGGGGCCAAGTATTAACTGCTGACGGAACTCCACTCATTGGAGTCAACGTTTCCTTTTTACACTACCCAGACTACGGATACACAATCACCCGCCAAGATGGCATGTAAGTTCATTTTGAGGCACT-TCTAAGACTCAAAGACAGCAAATATATTAATGAA-------------------------GGAGCTCCTTGTAAAAATAAA--------------TTAATAATTACATAATGGAAACAAAAGACATGAAAAAAAT-------------------------------GGTTGA-------------------GCAACACCGTA------------------CTTTGTCC-----------------ATTCTTCA--GGTAATGTTAAAC-ATGCCCACTATAT---------------------------------------ACTTTAGAAGTAGAA------GGACTTGTTTAATTTAAAAACAGGATCCCAAATTCTCCATTCTTAGTGCAGTATTACGTAGTGTAATGTAATTGAT---------TTCTGTACTGCTACTAGTAGAGCAATTCTATCTTC-----AGAGCAGTACAATAGGATGAAGAATCAGATAGTAAAATGGATGCTGTGGATGGCTTTGGGAATTTGCTTAATAGCTGCCCCTATTTTTTTCTAGGTTTGACTTGGTAGCAAATGGTGGTGCCTCTCTGACATTGGTGTTCGAGCGATCGCCGTTCCTGACACAGTATCACACAGTATGGATTCCCTGGAATGTCTTCTATGTAATGGACACCCTGGTCATGAAAAAGGAAGAGAATGACATTCCTAGCTGTGATCTGAGTGGATTTGTAAGGCCAAACCCTATCATCGTGTCATCACCTTTATCTACCTTCTTTAGAATTTCTCCTGAAGATAGTCCTGTCATCCCAGAGACACAGGTAAACTGTTCTC ......x:.x........:..x:.......:...........:.....::.......:..:.....:........:..:.....x..:..:..x.....:..:..:..:..:..........xx..:..:..x..................x.x........:..x........:..:..x...x.x..:.....:.....:........:................:.....x.:..-----.x..:...x.x::..:.x.:...------------x.:.....:x.x.---x.:.....::.:.x..---------------...::x.x:x.:.x.x.x..xx.x:x:.:xx:...x:..x.......::xx.:xx......x....------.x:x...:...----..x::x:..x.:....x..----------...xx..:.x..x.x....x..:x..x.-------...x:.:..:.x:.....x..x.x....:.....:.......:.........x.-...................x.....----...:......x..::..:....x.:.:..:.:x..........x------.:...............................x...............:.:.xx...:.:.....x..........:..:.............:....:..................:....:......xx.:............::x:..........::..................:......x...x..:........................::x..:x:xx......x.....x.......:..:x..............:..:.::......:..:.....:x.:.......x..x.....x......:.:::---......:.....x:....---....x.x:xx::...x.x:.......--..x.:..x.:x:.........-x...:.x.......x..xx.:.....:...x...::..--....x:-.x::...:.x..xxx....x::.----.:..x.:x:x.....x..--.::x.x.:x...-------:....:..---....x..x.xxxx.x.x..xx...---...:..x:..------.....xx.......----:x.....:x:.x.x::::x.:::..x.x.:...-.:.x:x.xx.:..x.:..x....x.x....xxx..x.xx::::xx.....x..:..-..xxx...x..:..x.xx.....::-...................x..:.........:.:........:...........:........x..:..:..x.....x..:........x..:.....:..x..:........:..:..x....:....x:.::::xx:....-...----..x..:..:xxx.......xx..:x.:-------------------------.:xxx.....x....x..::.--------------...:xxx:....x.x.x.x:...:x.x.:...:x.:.:..-------------------------------:.....-------------------.:..:..:...------------------.......:-----------------.x....:.--......:..xx.:-...:.:::x.:x.---------------------------------------.x...:...:x.:..------.:.....x.x..--..x.x.:....:x.x.:.x.x.::...x.-------:..x:x.x.:.x:..x.x:x..x...---------..:::..:x:xx::.:.x...:x..x.:x..:...-----.:....xxx:..:xx:.x..:.--------x..:x.x...xx.:.:..x:x.::::x.:x....::..---x...xxx..:.:..:...::...............:...........x........:..x.....:..:..:.....x..:.....x..x........:..x..:........x...........:.....:.....:.....:........:..:.................:....................:..:........:..:.....:.................:.....:..:...x:............:.....::....:..x..:...........x.:..... 238M5I23M12D13M3D16M15I66M6D11M4D19M10I28M7I54M1I25M4D44M6D322M3D18M3D26M2D21M1I38M2D6M1I23M4I18M2I12M7I8M3I24M3D10M6I14M4D33M1I56M1D25M1D145M1D3M4I27M25D21M14D40M31D6M19D11M18D8M17D8M2D13M1D13M39D15M6D12M2I29M7I26M9D35M5D22M8I38M3I298M 1417/1961 72.3% 2048/94230402 0.0% 328/1961 16.7% 130012262 60202293 +18780 chr4 + 190214555 182736787 182736786 182737081 295 TTCTGCTTTATTCAAACTTAGGTACTCCACGAGGAAACTACAATTCCAGGAACAGATTTGAAACTCTCCTACTTGAGTTCCAGAGCTGCAGGGTATAAGTCAGTTCTCAAGATCACCATGACCCAGTCTATTATTCCATTTAATTTAATGAAGGTTCATCTTATGGTAGCTGTAGTAGGAAGACTCTTCCAAAAGTGGTTTCCTGCCTCACCAAACTTGGCCTATACTTTCATATGGGATAAAACAGATGCATATAATCAGAAAGTCTATGGTCTATCTGAAGCTGTTGGTAAGT chr4 - 94230402 52724495 52724494 52724789 41505614 41505613 41505908 295 TTTTTTCTTACCAACACGCAGGTACTTCATGAAGAAACGACAATACCAGGAACCGATTTGAAGTTATCATACTTAAGCTCCAGGGCTGCAGGATATAAATCTGTTCTGAAGATCACAATGACCCAATCTGTGATACCATTTAACTTAATGAAGGTTCATCTTATGGTGGCGGTGGTGGGGAGACTTTTCCAGAAATGGTTCCCTGCATCTCCAAATCTGGCTTACACTTTTATTTGGGATAAAACCGATGCATACAACCAGAGAGTCTATGGATTATCTGAAGCTGTCGGTATGT ..:.x::...::x.x..x:.......:..:..:.....x.....x........x........::.x..x.....:..:.....:........:.....:..x.....x........x........:...:.x..x........:.......................:..x..:..:..:.....:.....:..:.....:.....x..x.....::....:..:.....:..x...........x........:..:....:.........x:.............:....x.. 295M 237/295 80.3% 295/94230402 0.0% 0/295 0.0% 130012292 60202263 +10850 chr4 + 190214555 182738395 182738394 182738549 155 TTCCAGTGTCAGTTGGATATGAGTATGAGTCGTGTTTGGACCTGACTCTGTGGGAAAAGAGGACTGCCATTCTGCAGGGCTATGAATTGGATGCGTCCAACATGGGTGGCTGGACATTAGATAAACATCACGTGCTGGATGTACAGAACGGTAAG chr4 - 94230402 52725161 52725160 52725315 41505088 41505087 41505242 155 TTTCAGTGTCTGTGGGCTATGAATATGAGTCCTGCTTGGATCTGACTCTCTGGGAGAAGAGGACTGCCATTTTGCAGGGTTACGAGCTGGATGCCTCTAACATGGGTGGCTGGACACTGGATAAGCATCATGTATTGGACGTTCAGAATGGTAAG ..:.......x..x..x.....:........x..:.....:........x.....:...............:.......:..:..::.......x..:..................:.:.....:.....:..::....:..x.....:...... 155M 129/155 83.2% 155/94230402 0.0% 0/155 0.0% 130013234 60201321 +33075 chr4 + 190214555 182741233 182741232 182743448 2216 CACAGGGTGAACAGATTGCAGTTTAGAATTTTATCCAAGAACATTT-TGACAAGTAGTGGCTTTCCAAAGTGACATGTGTCTAATTGAATAAACAAAGTGATTTGTAGTCATGACAAGGTGGATGAGCTATAGAAAGACATGAAGGAAGAAGAGAATACGGAAACGTAGATGCTGACAGTTATTCGTGCGGGCGCCCTGAAACATGGAAATAAATATTCTCATGTTCATCTTTCTGTTCTGTCATCATAGAGAAGAAGCAGGAAGGGCCAATCGTTCAAAGTAATGACTGAATAAATCAGATGTTGTAGAGCGGTAGTCTGACTTGTAGGATTCTTCTGATGAAAATTACACAACT-GGCTCTTATAGG--AAATTATAGCTCCATAATTATCA--ACTAACGTAATCACAGAAAGAAGAATCTTAGATATCACTAATGCATTCT----TTGAATATTCAAGGCAAAATGCATTTCACCTCTTGTTATGATCCAGC---CTTATTTAGCTTATTTTTC-TTAAATTTGAATAAACCTGTTTTATTTTCCCTGATTTCTTTATGTAAATTTGCTATGATTATTACATCACCCAAATAGCAAAGCATTA--AAGAAGTAATCACAGAATGCACCTAAAATGTGCTGAGTTATAAGGAGAACATAATTATTCTAATTTCTTCTTCACTTTAAAATT---ATCCCGAAGTGGGGG--GAAAAAGCACTT--TCTCAAGTTTCCTGATTGTACTTTCGTGGGATTATTCTTTCAACAGTGTATCTGCTAAGAAGTAGGGCCATTATCTCTGA----GAACT-TCTTTGGAACATAGAACATTCAATAAATAGAATATATGCCGCTCTAAAGT-CAAAGCAGCAGGTGGTGTATACAGATGATAACACATTGAGAAGTGTCATAAACTGTGCATGGAACAATAGCAGCTGACTACCCCGTGTGCATCACGCCAAACTGGAGGCACTGATCTGTATAGAGCAATGGCAAAAG---CAATAAAATTACAATCTCAACTCAAATCTAATTTCTAACCATGAAAATATTTAATATTCATTTGGAAGCTTTTCTCAGATTTTCACTGAAGACCATAAAAGAGCAGA------CTGG-----CATTTTGTCTTGATAAAATTATTGGCACTTCCATGCCTTAAAGCAGAATTCACTGTAAATAATACATTGGCCTTCTACAACAGTTTTGTTATGTT---------CGACATTTTGAATAACCGCATGTATATGCATTCTCCTATTGGATGAGAGTGTACGCAGGAATAGTCTTTGACAGGATAGGTA------------GAGTTAA--AATAAGCCTGTATTATCGT----TACAGCTTTGGAGTTTGATGTCTATTTTCTACCTTTGTTTTCCACAAAGTTTGTTAACTTTAAAGAAAATTATAAATTCAAAAGAAATTTGTATTCCTGGTTCACATTTTTATTGACTGAATATTTTCAATATTGATTAACAATGAGGCAAACTTGTTATTCCCTAAAGAACATTATGTAGAGCCTGTTCTCAAACCTGGTTGCACGTTAAGATCATCTGGAGAGTTTTTCTAAATTTCAGGGCTAAGGCTGCACCTCAGACAAATTAAACCACCATCTCTCTGGGTGAGAACCAAGCATTAATATTTTTTGGCAACTCCCCAGGCCATTCCAGTGTATAGCCATGACT-GATCATCACTGATGTTGAGAATTGGGGTTTTAAT------TCTTCTCAGGCTTTTGTTCCTTTCACCAGACATGATTTCAGTTCACAGTAGACAGCACTGTTGGTATATATCCTATGGACTTTATCGTGTAATATTTTACACTAGGTAGTTGAATACAATTCATTCCAATGGAGCTTCAAATAAGAATGTCTTAATCCAGACCTGACAGGCATTGAATTATAGTTAAAACAATCATGAACATGTTTGCTTTTCATCTTTACACTTTTTCATCATAAGAAAAACAATGCACTTTATTTCTTCTAGGTATACTGTACAAGGGAAACGGGGAAAACCAGTTCATCTCCCAGCAGCCTCCAGTCGTGAGTAGCATCATGGGCAATGGGCGAAGGCGCAGCATTTCCTGCCCCAGTTGCAATGGTCAAGCTGATGGTAACAAGTTACTGGCCCCAGTGGCGCTAGCTTGTGGGATCGATGGCAGTCTGTACGTAGGCGATTTCAACTATGTGCGGCGGATATTCCCTTCTGGAAATGTAACAAGTGTCTTAGAACTAAGGTACGTCTTTCCTAAATTTGGGCTTTTAA chr4 - 94230402 52726559 52726558 52728536 41501867 41501866 41503844 1978 CACAAGCCAAATCAATGGCAGCTTTAAATTATGTTCAAGAGTACGTATGACAAGTAATGACTTATCAGAG----GTGTGTTTAATTGAATAAACGAAGTGGAGAGTTGCAATGACAAGGCAGGTGAGCTGGAGAAA----TTAATTCAGAAGGGAGTGCAGACAC---------------TGTTTGCACGGACATCCCCAGCTCCTGCAGTAAATAGTCTAATGTGCATCTCTTAGT-CTGTGATAATAGAGGAGAAATGTGAAGGACCCATTTTTCAAGGTAATGACAGAATAAATCAGGTGCAATACTGCACTGTGCTGACTTGTAGAATTCCTCTGATGAAAATTATAGAACTCAGCTATTTCAGGCAAAATTATGGTTCCATGATTGTCATAAATGATGTAATCATAGGAGAGCGGATTTCGTATACTACTAATGCATTCTGGCTTTGACTATTCATGA-AAAATACATTCTCCTTCTT----TGAGTTAGATTACTTATTTAGATTACTTGTCATTAAGTTTCCATAAACCATTTTCATTCTTCCCAATTTTATCATGTTTATTGCTCTTACGTGTATAATCTCCCAAATTTTATAACATTATCAAGTAGT-------GAGGCCACCTAAAACAT------TTAAAGAGGCAAAGTATTCTTTCCACATATCTATCAGTACGAAGAGTTCAGTTTTGGGGTGGGGACTGAAAGAGGAATCCATCTTCAATTTCCT------------------------------CAATGCATCTC-----AAAGAGGACTGTGTTCCCCAGCCCCAAACTGCCTTTGGAACT--GTACAGACAACCAGTACAGTGTGCATCACTGTGAAGTACAAGGTGACATGAGGCTTACATGGATCGTACCATGGACAGACATATTGTGACTCAGGAGCGCCACCTTGATAGATGACCGTC---GGTAGGCTGCACTGTGGTGGATTCATTGACATCT-----TCAATACTGAGGGTTCCGGCAACATTTTAATAT--GCTATAA---AATGACTGAAGATGTAA-CATAACACGTGCATTT-----TTCTTCTCAATTTCCTATGGAGG--CATAAGGAAGAAAAATACTGCTGAAACATCACTTTGTCTTTACGAAATTACTGTTCCTTTCATGCCTCAAAGCAGAATTAAGTTTAAGAGGCAGGTTGGCCTGGCACCACATTTTTTTGTTGTTGTTGTTTTTTGACATTTTTAATAACTGCCTGTAGCTGCAGAC---------ATGGGACTG-AGGCAGACATTGT---TGCCAG---AGGTACATTTTCATTGTGAGCTGAGTAAGGAGCTTTTTATAGTGTAAGATACAACTTT----TTTGAAGTACTTCTTTAATTAGTATTTCC-----AGTTTGC-AGCAGTAAT--------CAAGTTTAGATGACATTGACAT--------CACAGTTATA-------GGTAGCTATAGTA---------------GCAAATACTTTTTTTCTT--------TTTTATAA--------TCCATACAGGGGTGAAATTTCAG-TCAATTCAGGAGAATTCCAAAAT-----------GGAAACATTTAAAATAGTTTTTGCTACTTTCAACAGAGAGGATATT------TTAATGCTTTCTGTG------------TGTTTTAGTGTAT--TTGTGACTTGATCACAACT----------ATAAATGTCTTAATAAAAAGTCCTCTTA-----------CTTGTAGTGAGAAAAAATATGGTGC----TAAACAA--------GTAAAAGTCCTTTAAAGTGAATC------------AAACCAAGAAAAGGAAG------CATTC-----------------AGAATGTCTGTGTGCCAAT-TAATGTATATACATGCACAGTTTTAACAAAC-----------TACTTTCAATTTTGTGTTTTTTGCATTAC-----------------------CTGCCAGGAATCCTCTACAAAGGAAATGGTGAAAATCAGTTTATATCTCAGCAACCCCCCATTGTCAGCAGCATTATGGGCAATGGAAGAAGACGCAGCATCTCCTGCCCTAGTTGTAATGGTCAAGCTGATGGTAATAAATTACTGGCTCCAGTTGCCTTAGCTTGTGGGATTGATGGCAGTCTTTACGTGGGGGATTTCAACTATGTTCGACGGATATTTCCATCTGGAAATGTAACTAGTGTTCTCGAGCTAAGGTAAGTTTTTTTCACATCTTGGACCTTGA ....:.x::..:x:..x....:..x:....x.:.:.....::.:x.-.........:..:...x:..:..----:.....:.............:.....:xxx..x.:x.........::.:......:x.....----.x..xxx.....:..:.:.:..x..---------------.:..:.::...:.::..:x.:x:x:x.x.:......x...x....x.....:.:x..-....x..x......:....:::x.....:..x..:x.....:........x...........:..:x:..xx..:x.:xx...........:....:..............:.x....-:...x..x:...--.......:.:.....:...:...--.x.:.:.......:..:.:::x.:..:.::x...::.............----....x......x.:-.....:....::x.:....----...x::..x---.........x...:..x..-....:...xx.......xx...:...:.:..::....:x.:....xx...xx::x.:xx.:.xxx...x.......xx:.x.:.....--...x...-------..:xx.........::.------...x.::.:x..x:..x.:x...:.xx.x::.x.:x::x:x..:.x.---:.:::.::......:--....:..x.x.:--...:x.:......------------------------------..:..:....x-----..:x...:.::.xx..:.:::----:....-:.........x--.x...xx...:x.:..x.:.:.::::.:..x.:....-...:.:::..x.x..:x..:.::...x:..x..::xxx...x:.:.::.:.x:::x.x::.xx..xx.:::..x....:::.---x..:x::::.:.::x:x....xx..:...:x.x.-----x....:x::.::.---.:::..x...x:...x.--:..xx..---...xx..:.xx...x..-:..xxx.::.x.....-----:.:......:x..:::.:x..:.--.....:::..x.:.------...:-----..:........x.::......:..x:x...:.......:...........x.x.x...:x:::.x:.......xx:..x...x....x.xx....---------:........x......:..x....xx....xx.---------...:..x..-.x....:x..x..---..x...---.....------------...:.:.--..x:...:.x.xx..x:..----....:....----.....x..x:x.:..:x.::xx.:...:.-----......:-.:.xx...x--------:..:..:.:.x..x...x::..--------....x..x..-------::..x:.x:.:..---------------.....:x:x..x..:.:.--------..x.:..:--------::..x..xx..x..x.xx..x..-...x:.x::...xx..:.x....-----------..xx:..::.x.:.:.:x..xx:.:..:x..xx:xx:.:x..x.x:------.....::...:..xx------------::..::.......--:::.....-.....:x...----------..x::x..:.....------..:...:.-----------...x:.x::::x.x:.x.x::..x.----..:...:--------...x.x:....x.::.x.xx...------------.x..:.:.x.:xx...x------.....-----------------.........xx:.x.x:.:-.:.::x::..xx.xx:.:....xx.....x.-----------.:....:x..:..xxxx:....x...:.:-----------------------..x.:...x..x..x.....:.....:..x.....:.....:..x..:.....:..:..x:.:..x..:.....:...........:x....:........:........:.....:....................:..:........:.....x..x:.............:...........x.....:..x..............x..:........:..x..............x.....::.x..:........x..:...:::.x..:.x..x::..:. 46M1I23M4D62M4D25M15D57M1D118M1I12M2I23M2I49M4I14M1D19M4D9M3I19M1I88M2I7M7D17M6D47M3I15M2I12M2I13M30D11M5D21M4I5M1I11M2D37M1I82M3D34M5D13M3I17M2D7M3D17M1D16M5D23M2D14M6I4M5I95M9I33M9D9M1D13M3D6M3D5M12I7M2I19M4I9M4D29M5D7M1D9M8D22M8D10M7D13M15D18M8D8M8D23M1D23M11D46M6D15M12D13M2D8M1I10M10D14M6I8M11D25M4D7M8D23M12D17M6D5M17D19M1D31M11D29M23D286M 1251/1901 65.8% 1978/94230402 0.0% 392/1901 20.6% 130014674 60199881 +15815 chr4 + 190214555 182751788 182751787 182752035 248 TCCTTTTCACAGCAGCAACCCAGCTCATAGATACTACCTTGCAACGGATCCAGTCACGGGAGATCTGTACGTTTCTGACACAAACACCCGCAGAATTTATCGCCCAAAGTCACTTACGGGGGCAAAAGACTTGACTAAAAATGCAGAAGTCGTCGCAGGGACAGGGGAGCAATGCCTTCCGTTTGACGAGGCGAGATGTGGGGATGGAGGGAAGGCCGTGGAAGCCACACTCATGAGTCCCAAAGGTA chr4 - 94230402 52733618 52733617 52733865 41496538 41496537 41496785 248 TCCTTTTTACAGCAACAACCCAGCTCACAGATACTACCTCGCTACTGACCCCGTGACAGGAGATTTGTATGTTTCTGACACAAACACGCGCAGGATCTACCGGCCCAGGTCACTTGCGGGTGCCAAAGACCTGACGAAGAACGCAGAGGTGGTCGGAGGGACGGGGGAGCAGTGCCTGCCCTTTGATGAAGCACGGTGTGGTGATGGGGGCAAGGCGGTCGAGGCAACTCTCATGAGCCCTAAAGGTA .......:......:............:...........:..x..x..:..x..x..:......:....:.................x.....:..:..:..x..x.:.......:....x..x......:....x..:..:.....:..x....x......:........:.....x..x.....:..:..:x.:.....x.....:..x.....x..x..:..x..x........:..:....... 248M 200/248 80.6% 248/94230402 0.0% 0/248 0.0% 130018170 60196385 +70761 chr4 + 190214555 182753435 182753434 182755273 1839 TTCTCTCAAATACAGGAATGGCAGTTGATAAGAATGGATTAATCTACTTTGTTGATGGAACCATGATTAGGAAAGTTGACCAAAATGGAATCATATCAACTCTTCTGGGCTCTAACGATTTGACTTCAGCCAGACCTTTAACTTGTGACACCAGCATGCACATCAGCCAGGTAGTTAAATACTAAGCGGACTTGTTTGTTTTTCCTCTAGGTGACTTGACTTATTCAGTCGGTAGACTATGA--TGGCACCATATTAAACTGCATATATCATGTGT----------TGCAGTGGTTCTGATAGGGCA--------GTTCCATTTACATGTATCACAGGAGCTAATAAAAAGTTATTTTCTT--CTATAA----TTCTACATTTGAT------------GAATTCAGTGAGATACAGAACA-----ATTATCACTAAGAAATGCTAAGCATTTGTAATAAAATACCAGTAAAGTAGGAG--------------------CATGCAGGTATTCTAAAAAGAACCAAACAACTGAAATCTCTAATCTTTT-GATTGCATGAGCTCCTTAAGTAGTAGAGAGAACCCACTA--TGATTAGTGCCAAGGGACTTATATTTAGAAATAGAAACTTTACTGTTGGCCTGATTGAAAACACAATAGAATACTAATCTATTCATAACCTAGAAAGCCCCAACATTTGGTGGTTATTGCTGCCATAAGGAACATGTG-TGTTCAT--AGCTCA----TCGATATCTGT------------TGACTCACTAC--------------------------GTAGAGG--------CCTATTTGCTATTTGC-------CTGT----------AACTAGC-------AAATCTTTCTGTGAGCTGAATTTTAAAATAAAGTGTTATTTCCTGTATCTATCTTCATTCATTACTTTTTGGTTTATTTTACTGAGGCTATTGAAAAAACTATTATCA-GACAGTTTATCTCAGATT-AATGCCAATTTCCCTGAATGGTCTAATTTACTCTTCTGGCGAATTAACTGTAGTGCAGTAACTTACTAACCAGGCCATTTCTTTTTTTATTAAGGTACGTCTGGAATGGCCCACTGACCTAGCCATTAACCCTATGGATAACTCCATTTATGTCCTGGATAATAATGTAGTTTTACAGATCACTGAAAATCGTCAAGTTCGCATTGCTGCTGGACGGCCCATGCACTGTCAGGTTCCCGGAGTGGAATATCCTGTGGGGAAGCACGCGGTGCAGACAACACTGGAATCAGCCACTGCCATTGCTGTGTCCTACAGTGGGGTCCTGTACATTACTGAAACTGATGAGAAGAAAATTAACCGGATAAGGCAGGTCACAACAGATGGAGAAATCTCCTTAGTGGCCGGAATACCTTCAGAGTGTGACTGCAAAAATGATGCCAACTGTGACTGTTACCAGAGTGGAGATGGCTACGCCAAGGATGCCAAACTCAGTGCCCCATCCTCCCTGGCTGCTTCTCCAGATGGTACACTGTATATTGCAGATCTAGGGAATATCCGGATCCGGGCTGTGTCAAAGAATAAGCCTTTACTTAACTCTATGAACTTCTATGAAGTTGCGTCTCCAACTGATCAAGAACTCTACATCTTTGACATCAATGGTACTCACCAATATACTGTAAGTTTAGTCACTGGTGATTACCTTTACAATTTTAGCTACAGCAATGACAATGATATTACTGCTGTGACAGACAGCAATGGCAACACCCTTAGAATTAGACGGGACCCAAATCGCATGCCAGTTCGAGTGGTGTCTCCTGATAACCAAGTGATATGGTTGACAATAGGAACAAATGGATGTTTGAAAAGCATGACTGCTCAAGGACTGGAATTAGTTTTGTTTACTTACCATGGCAATAGTGGCCTTTTAGCCACTAAAAGTGATGAAACTGGATGGACAACGTTTTTTGAGTAAGTATATGAAA chr4 - 94230402 52734325 52734324 52736221 41494182 41494181 41496078 1897 TTCTCTTCACTGAAGGAATAGCAATTGACAAGAATGGGTTAATCTACTTTGTTGATGGGACCATGATCAGAAAAGTGGATCAAAATGGAATAATATCCACGTTGCTTGGCTCCAATGATCTGACCTCAGCACGACCTCTGACCTGTGATACCAGCATGCACATCAGCCAGGTACGT---------GGGAACTCATTTG-----------GAGAGCTGAGCTGGGGCTGCAGGTGCAATGCAGCTTTCTTCCACCTTAAAATAAAACTGTGAAGTGTATAACAATTCGGGAGCGGTATTTGTGGAGAAAGAAACCTGTTCCAAGGGCATGAGTCGCAGCA-------------TGTTCTCTTAGCTATAAATGCTGCTGTATTCAATTTTCTGCCCATAAAGTTCAGTTTAGTTTAGAACAGCAAAACCATCAGCAGGAAGCATTAAGT-CTAGTAGTAAA-TACTGAAAGAATGGCAGATATGTTACAATTCCATTGGCACGTTGATGTTTT--------CTCAATTACTAGCATCCTTAGCCCACTAGAGTGAATGAGATAAT-GTGTACAATAGAGTATTTATTTATTTTTTTGTCTCAACAAGTTTATGTAGGTAAGAAGGGATGTCACTACTGCTGTGTTTAAAAATGGAGTACAGTACCG---TGTTT-CAGTCTGGAAGGCAGTAAGTTGTGTTTGCTAT-GCAAGAATAAAAAATGAGTGCTGTCTATGAAGACCAGCCTTTGATATCTATCTCTATTTTTATTTATGCATTGCTGATACAGAAAAGTGTAACATTTATTGGAGGGGAAATTTGACCTATGTTACAGTTCCAACACTGCTGTTCTTTCAATAAAATAGCTATCCTGACATCCTTCCCCTTGCT-CACTTGAAAATC---TTTCATTTGCTGCATGTATTTTCATATAAGAATTCTCATCTGCATTGCTTACAGCAAATGAAAAA--TACCTTCATGGCA--TTATCTTAAGCTGAAGGTGAATTT---------GTTTCATTTCATCCAC--ACTGGTTAACTGTAATGAA-----------------CCACTTCTCTCT--GTTAAGGTTCGTCTGGAATGGCCAACAGATTTGGCCATCAACCCCATGGATAACTCCATTTACGTTCTGGACAACAACGTCGTTTTGCAGATCACTGAAAACCGCCAGGTGCGCATTGCTGCGGGGAGGCCCATGCACTGCCAGGTTCCTGGAGTGGAGTACACGGTGGGCAAGCACGCGGTGCAGACCACGCTGGAGTCAGCAACTGCCATTGCTGTGTCTTACAGTGGGGTACTGTACATTACAGAGACGGACGAGAAAAAGATTAACAGGATAAGGCAGGTTACAACCGATGGAGAGATTTCATTAGTTGCTGGAATACCTTCAGAGTGTGACTGCAAAAACGATGTCAACTGCGACTGTTACCAGAGTGGAGATGGCTATGCTAAAGATGCCAAACTTAATGCCCCCTCCTCCTTAGCTGTGTCTCCAGACGGCACACTGTATATTGCTGATCTGGGAAACATCAGGATACGGGCTGTGTCAAAGAACAGACCCTTATTGAATTCAGTGAACTTTTATGAAGTTGCTTCTCCAACCGATCAAGAGCTTTATATCTTCGATGTCAATGGTACTCACCAGTACACTGTGAGTTTAGTCACCGGAGACTACCTGTACAACTTTAGCTACAGTAATGACAATGATATTACCTCAGTCACGGACAGCAATGGGAACACTCTGCGTATCAGACGGGATCCCAACCGGATGCCGGTGAGAGTGGTCTCCCCTGATAACCAAGTCATTTGGCTGACGATAGGCACAAATGGATGTTTGAAAAGCATGACTGCACAAGGACAGGAGCTGGTTTTATTTACCTACCATGGCAACAGTGGACTTCTGGCAACTAAAAGCGATGAGACTGGATGGACCACTTTTTTTGAGTAAGTACATAAAA ......:x.x.:x......:...:....:........:....................:........:..:.....x..:...........x.....x..x:.x..x.....:..:...:....:.....xx.....:.:..:.....:........................xx.---------.x.:...::....-----------.:x::..x::..x:xx.x.:x...:x.x.::::--.xx:x...:x.....x.:x.xx.:.x.x....----------x.x..:...x:.x:.:.:.x.--------......xxx:....x:..:...x.-------------.:..:....--......----.x..::...::..------------:.:......xx::.x:......-----.::....x:.:...::::....:-:.x...:....-...:::x.:.:.:.x..--------------------..:.:x.:.:..:.--------.:x..:x...::x...::..::.:x:.-..x..x.....x.xx.-:x...xx.x....x.:::.:.x--.xx..x..x:...x::::....:.xx:x..:x..::.:x.:...::..x:x..x..:....::x.:..x.:...::---.:..:-:.::..:...:..xx:..xx.x..x.x.:...-..x:xx....::..::x...-...::..--..x:..----.:.......:.------------.x.:x..:.:.--------------------------.x..:..--------.....x.xx:.x..x.-------....----------..x....-------.x...:...:x:xx...-x.:..x.....x---.x.:....x...:..x...:.....x:.xx.x..:.::x:.xxx..xx:.:x:..x.x.......--..::x...-.:..--......:.:::.-..x.:x.....---------..:.x....xx..:x.--:.x::.........:..x.-----------------...:....:.:.--:.......x..............x..x..::.:.....:.....:.................:..:.....:..:..:..x.....:..............:..:..:..x...........x..:x.............:........:........:..:x.x.....x.................x..:.....:.....x.................:...........x...........x..:..x..:.....:..:......x.............:.....x........:..:..x.....x..:.............................:....:......:..........................:..:..:...........:.:......x......:.:....:x........:..:..............x.....:..:..:...x....x.................:.::..:...:.x..:..x:.......:...........x........:........:..:..:.....:..::................:..:.....:...........:..x..:.....x.....:...........:.................:x.x..x..:...........x.....:..xx.x..:........:..x..:..x.....:..xx.......x..:..............x..x...:....:.....x.............................x.......x...::.:.....:.....:...........:.....x...:.:..x........:.....:...........x..x...............:..:... 176M9D13M11D33M2I32M10I21M8I24M13D9M2I6M4I13M12I22M5I23M1D11M1D17M20I14M8D27M1I16M1D22M2I76M3D5M1D32M1D20M1I7M2I6M4I11M12I11M26I7M8I16M7I4M10I7M7I17M1D12M3D65M2D8M1I4M2D12M1I11M9D16M2D19M17D12M2D895M 1304/1752 74.4% 1897/94230402 0.0% 232/1752 13.2% 130019110 60195445 +22225 chr4 + 190214555 182773105 182773104 182773650 546 TAACAGTGAATTAAATCTACTTTG----TAGAAAATATG-AAGGAATACTAAGGAATTTAATATCAGCAAACATGTTCCCTTTGAAACAGCAAATTAGATGTGCAGGAGGATTTTGGTCACACTTCAAAGAATCATGTGCTGAGATGGAGAGCTGGTCTGTTTACTCGTGTTCTCACCGGTGAGGTTTTTCTATGTTAAACGGGTTTTTGATTACTTCAAAGCATGTTTGAAGTCTTCACTCTGCATCGCTCATCCACGAAGA-CAAATAGTCCTC--CAAATTTGTGCAACTAATATTGCTACACATTATATTTATAAGTCAGAAGAAACTGCAGTTTCCT---ATTTAACACC----AAGTTAATGCCTCTTGTATTTAGCTATGACAGTGAAGGTCGTCTGACAAATGTTACGTTTCCAACTGGAGTGGTCACAAACCTGCATGGGGACATGGACAAGGCTATCACAGTGGACATTGAGTCATCTAGCCGAGAAGAAGATGTCAGCATCACTTCAAATCTGTCCTCGATCGATTCTTTCTACACCATGGTTCAAGGTA chr4 - 94230402 52751570 52751569 52752117 41478286 41478285 41478833 548 TAACAGCAAA---AATCTATTCTGGTCTCAGGGAGTGAGTACAGAATGATACAGAATTTAGCACTAAGTAATACGCTCCCTTTGAAATGGTGTGTCTGTTGTGCAGCAGGATCT-GGTCACACTTCAAAGAATAATATGTGGAGCTGAGGATCCA-TCTGTTTGCTCTCGCCATCACTACTGAGACTCCTGTATGTTAAA--GTCTTTTGACTACTTCAAAGCATGCTTGAAGGCTTTGCTATGCCTATGCCGTGCACAAAAAGTAAACATGCCTTAACGATATTGAGTAGCTGGTATTTTGATTCATCTTACTTGTAAATGAAAACAATTTG----TTCCTGCCATGTATCACTTAAGAAGTTTTGG--TTTTTTTTTAAGCTATGATAGTGAGGGCCGTCTGACAAATGTTACGTTCCCAACTGGAGTTGTCACTAATCTTCATGGGGAAATGGAAAGGGCCATTACAGTGGACATCGAATCATCCAGCAGAGAGGAAGATGTCAGCATCACTTCCAACTTATCATCAATTGATTCTTTCTACACCATGGTTCAAGGTA ......::..---......:.:..----:..::.:.:x.-.x:....:x..x:.......::.::.:xx..:.:.:...........::.::x:.:x.x.......x.....:.-..................x..:..:x...x..::..x.::-.......:...x:.::x....::x....::.::.x.........--.x:......:..............:......x...::..x...x.xxx:.:.x...:..:.-:...:.xx...:--.:.xx...x.:.:..::....x:x.:x...:x..:..:...:.x.:..x..x:..----.....---..x..x...:----.....xxx.--.:..x.x..x........:.....:..:....................:...........x.....x..:..x........x.....x.:...:..:...........:..:.....:...x....:....................x..::.:..x..:..:............................ 10M3D11M4I11M1I74M1D40M1D44M2D61M1I12M2I55M4D5M3I10M4I9M2D191M 392/533 73.5% 548/94230402 0.0% 28/533 5.3% 130021535 60193020 +17482 chr4 + 190214555 182774889 182774888 182775194 306 GTTCATGTTTTGTGCTTCTTGTT----CTTTAGATCAGTTAAGAAACAGCTACCAGATTGGTTATGACGGCTCCCTCAGAATTATCTACGCCAGTGGCCTGGACTCACACTACCAAACAGAGCCGCACGTTCTGGCTGGCACCGCTAATCCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCGAGAACGGTCAAAACTTGGTGGAATGGAGATTCCGAAAAGAGCAAGCCCAAGGGAAAGTCAATGTCTTTGGCCGCAAGCTCAGGGTACGTACGTGTTGTGGAGCAGGAGATAGCTGCAGCCCTCT chr4 - 94230402 52752676 52752675 52752985 41477418 41477417 41477727 310 gtttttgtttttggtttttttttgCATTTTCAGATCAGTTAAGAAACAGCTACCAGATTGGTTATGATGGCTCGCTTAGAATCCTGTATGCCAGTGGCCTGGATTCTCACTATCAGACAGAGCCGCATGTCTTGGCTGGCACTGCCAATCCAACAGTGGCAAAGAGAAACATGACTCTGCCAGGGGAGAATGGGCAGAACCTGGTGGAGTGGCGATTTCGGAAGGAGCAAGCCCAGGGAAAAGTCAACGTATTTGGACGAAAGCTTAGGGTAAGCATGCAAGCAGGCATGGGTGGTGTCTACTGCATTCT ...:x......xx.:..:..x..----:..:....................................:.....x..:.....:x.x..:..............:..x.....:..:...........:..::..........:..:.....:..:..x..x..:............:....x..x.....:..x..:...:.......:...x....:..:..:...........:..:........:..x.....x..x.....:......x.:.:.::xxxx..x:::..x.:.:x..:.x..x:... 23M4I283M 236/306 77.1% 310/94230402 0.0% 4/306 1.3% 130022213 60192342 +3291 chr4 + 190214555 182777523 182777522 182777580 58 GTGTGTGTGTGTGTGTGTGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAT chr4 - 94230402 49193410 49193409 49193467 45036936 45036935 45036993 58 GTTTTTTTGTGTGTGTGTGTATTTCTATGTTTTTTGGTTTTTGTTTTTTTTTTTATAT ..x.x.x...................x.x......xx.....x..........x.x.. 58M 48/58 82.8% 58/94230402 0.0% 0/58 0.0% 133584113 56630442 +3013 chr4 + 190214555 182778941 182778940 182779012 72 TTTTTCTTTTTTTTTTTAATGTCTTGAAGAATTGTTAGTACTTTTAGTTTTATTTTAGAGACAGATTTTGTT chr4 - 94230402 5622011 5622010 5622082 88608321 88608320 88608392 72 TCTTTTTTTTTTTTTTTAATGTCAAGTTCAATTTATTGGACTTTTAAATTTATTTTGATGTCCGATTTTACT .:...:.................xx.xxx....xx.x.x.......:x........::x.x.x......::. 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 177156930 13057625 +29862 chr4 + 190214555 182788891 182788890 182789781 891 ACAAATGCCAGGCTGTCTTTCTGCTTAATAAAACATTTTAAAAGAGCAGTTAATCTACTGCCTTGCACTTGTACCCAAGAAGTTGCTAAGTTAATTTACTGACAAAGAGAATCAATCATCGTAAATGGTGTTTAAACAAT-ACTGGGGACTCCGG----------------------TGTTGGAATAACATGATTTATTTTATCATCTTGTTGGTGTTGTAACAGGTTAATGGCAGAAACCTCCTTTCAGTTGACTTTGATCGAACAACAAAGACAGAAAAGATCTATGACGACCACCGTAAATTTCTACTGAGGATCGCCTACGACACGTCTGGGCACCCGACTCTCTGGCTGCCAAGCAGCAAGCTGATGGCCGTCAATGTCACCTATTCATCCACAGGTCAAATTGCCAGCATCCAGCGAGGCACCACTAGCGAGAAAGTAGATTATGACGGACAGGGGAGGATCGTGTCTCGGGTCTTTGCTGATGGTAAAACATGGAGTTACACATATTTAGAAAAGGTATGCCTGCAAACTAAGCTCAACAATAGGGAAAGGATAATTCACATTTTTCAGCAATCATCCA------GAGCACTAAGGGGAA---AAAAAACAGTGGCACATGACTGAGTTCCATTT--GTTATTCGAAGTATCAATACGGAAGTCACATTGGCACAGCAGTGATGAATTTCTGCATTAGCAAAGTAGTTTCTCCTTAGTTAAGTTCTACTGTCTGAGACCCTTTTAAGTGATTTATGATGTAAACAAATAAGCATTAACGTTGTCCACCTGCCAAGCTTACACATT--GACAACATTCACAAATTAGACCTTGAGCGTGTAAGTCGCTTGTAAATAATTTTCGTGCTAGCTCTTCCATTT----------------------AAGAGAGAGCCTTACATTAGCACAGTTAAAGCTGTCAGCTT chr4 - 94230402 52757529 52757528 52758446 41471957 41471956 41472874 918 ACAAATTACAGCAGACTTCTTCACAGAATGGACCTTTTCAAAATAGATGCTAATGTAGTGCATCACATTTATATT-AAGAAGTTGCTAAAATAATTTATACACGCAGCAAGTCAGTCACTAGAAATGGCACTTAAAGAATTGCTAGCATTTCCTGGAAATAAGAGGTGGCAAGTAAATGTTTGAACAATGTGATTTATTGTGTCATTTTGTTTGTTTTTGAAAAGGTTAATGGCAGAAACCTCCTTTCAGTTGACTTTGATCGAACCACTAAGACAGAAAAGATCTACGACGACCACCGTAAATTCCTGCTGAGGATTGCCTATGACACGTCAGGGCACCCAACCCTGTGGCTACCAAGCAGCAAGCTGATGGCTGTCAATGTTACCTATTCATCCACAGGGCAAATAGGCAGCATACAGCGAGGGACGACTAGTGAAAAAATAGAGTACGATGGACAGGGAAGAATTGTGTCTAGAGTGTTTGCTGACGGGAAAACTTGGAGTTACACATATTTGGAGAAGGT--------AAAGAACATTCAAGGTTTTAAAAATG----CTTTGATTTTGCTGAAATCATACAGCATCTGACTGCTCTGTGCAATCCAAAAAGATGTAGCA-------GAAGCATATTTTGATTATTCTAAGTATCAACATGTGGCTCCTATGGGAATGT----------TTTATAAAATAGATGTGCAGCCTTGCTTTAGGTGACTGTTAAGAATTGATGACTTTTTAAATCATTTAGGCCATAGACTAACAAGTAGCATCTCCATTTATTTTTTAC-CTTAACTATTAAAATAAGGTACAGGAACCAGATCTCTGCAACGTAAGTCAGTTGAAAATCATCTATTTGTAAATTCTTCACTGTTGTTTTTTTTTTTTCCACTACCAAGAAAAGCTCTTGTTTCTAGATAGTTAAAGCTGTCAGCTT ......xx...xxx:::.:.:::.xx...::.x.x...:....x..xx.:....x..x...x.::..:..:..::-.............:x.......:xx..:x..x:.:...:...:::x......:::.....x...-:..:.x:x:...x.----------------------....x...:..::.........x.:....:.....x..x..xx..x...........................................x..x.................:.................:..:........:.....:........x........:..:..x.....:....................:........:.................x.....x.x......x........x..x.....:..:...:....x..:..:........:..:..:......x.:..x........:..x.....x.................:..:.....--------...xx.x::....x:x.xx::...x.----:.:xx.....x.x.x......x..------..x::..xx.x.x..---.....:xx..:...-------..:x:x:....--:......x.........:.:.x::x..x:..x..x.::x----------...x.:x.x...xx:x.:..::.:x.:....x.:.x.x:..xx:x:...x:x.:......:.x.....x.x::..:..x..:...:.x:.x.x:::.::.::.x::.x-....xx:...--:.:..x:.x..x:..::...:..:x:xx::.......:x...x....x..:.x:x..:x.::.....xx.x.----------------------....:.::x:...::x.:x:x.:.................. 75M1D64M1I14M22I347M8D26M4D24M6I15M3I14M7D11M2I39M10D108M1D10M2I72M22I41M 600/860 69.8% 918/94230402 0.0% 89/860 10.3% 130031362 60183193 +129494 chr4 + 190214555 182791878 182791877 182793889 2012 AAATAATTGCTAATTAT--GGATAGAACTGCATTCCCCATATGCTCTTTTCTCCTCAAAATATTGTCTGTAAAGCAGCTTTGATCATGCCTGTATTA----TGACTAATCCAGATCCATTGACAAATCTGCTGGTTGGCTATGAATGTCTGGGAAAATAATGGTACTGTCGTGACAGGCAGCACATTGTGAATCTCGAGCCACTAATTGCAGAACCCCTCACAATTAAGCATCCAAGCAAATTAGGCAGAGAAACGTTAACAACACGCAAGGTCAAGGATAACTCAATTAAAATGAAAATCA-TTTTCTCTAGTGGAA------TGTTTCTGT---------GCATCTGT----GGTCACTAAATCTGCTTTTGCA-TCTCCCGTTCACAAACACTGAGTAACAGTATGTTCTCTCTTTACAGTCCATGGTTCTTCTGCTTCATAGCCAGCGGCAGTACATCTTCGAATACGATATGTGGGACCGCCTGTCTGCCATCACCATGCCCAGTGTGGCTCGCCACACCATGCAGACCATCCGATCCATTGGCTACTACCGCAACATATACAACCCCCCGGAAAGCAACGCCTCCATCATCACGGACTACAACGAGGAAGGGCTGCTTCTACAAACAGCTTTCTTGGGTACAAGTCGGAGGGTCTTATTCAAATACAGAAGGCAGACTAGGCTCTCAGAAATTTTATATGATAGCACAAGAGTCAGTTTTACCTATGATGAAACAGCAGGAGTCCTAAAGACAGTAAACCTCCAGAGTGATGGTTTTATTTGCACCATTAGATACAGGCAAATTGGTCCCCTGATTGACAGGCAGATTTTCCGCTTTAGTGAAGATGGGATGGTAAATGCAAGATTTGACTATAGCTATGACAACAGCTTTCGAGTGACCAGCATGCAGGGTGTGATCAATGAAACGCCACTGCCTATTGATCTGTATCAGTTTGATGACATTTCTGGCAAAGTTGAGCAGTTTGGAAAGTTTGGAGTTATATATTATGATATTAACCAGATCATTTCTACAGCTGTAATGACCTATACGAAGCACTTTGATGCTCATGGCCGTATCAAGGAGATTCAATATGAGATATTCAGGTCGCTCATGTACTGGATTACAATTCAGTATGATAACATGGGTCGGGTAACCAAGAGAGAGATTAAAATAGGGCCCTTTGCCAACACCACCAAATATGCTTATGAATATGATGTTGATGGACAGCTCCAAACAGTTTACCTCAATGAAAAGATAATGTGGCGGTACAACTACGATCTGAATGGAAACCTCCATTTACTGAACCCAAGTAACAGTGCGCGTCTGACACCCCTTCGCTATGACCTGCGAGACAGAATCACTCGACTGGGTGATGTTCAATATCGGTTGGATGAAGATGGTTTCCTACGTCAAAGGGGCACGGAAATCTTTGAATATAGCTCCAAGGGGCTTCTAACTCGAGTTTACAGTAAAGGCAGTGGCTGGACAGTGATCTACCGTTATGACGGCCTGGGAAGGCGTGTTTCTAGCAAAACCAGTCTAGGACAGCACCTGCAGTTTTTTTATGCTGACTTAACTTATCCCACTAGGATTACTCATGTCTACAACCATTCGAGTTCAGAAATTACCTCCCTGTATTATGATCTCCAAGGACATCTTTTTGCCATGGAAATCAGCAGTGGGGATGAATTCTATATTGCATCGGATAACACAGGGACACCACTGGCTGTGTTCAGTAGCAATGGGCTTATGCTGAAACAGATTCAGTACACTGCATATGGGGAAATCTATTTTGACTCTAATATTGACTTTCAACTGGTAATTGGATTTCATGGTGGCCTGTATGACCCACTCACCAAATTAATCCACTTTGGAGAAAGAGATTATGACATTTTGGCAGGACGGTGGACAACACCTGACATAGAAATCTGGAAAAGAATTGGGAAGGACCCAGCTCCTTTTAACTTGTACATGTTTAGGAATAACAACCCTGCAAGCAAAATCCATGACGTGAAAGATTACATCACAGGTAA chr4 - 94230402 52758851 52758850 52760883 41469520 41469519 41471552 2033 AAATCATCTCTAATTGTAGGGAAGAAATTGTATCTCCCATATGTTGTTCTCCTCATGAGTTAATGGCTCTAAGACAGTTTTACTTCTTCCCATATTAAACATGACTTATCTGAATCCATTGACAA-TCTGCTGTTTAGCTGTGAGTGCTTGATAAAA--GTGATACAGTCATAACAAGTAGCAAATTATGAATGTCGAACTACTAATTACAGAACCCCTTACAATTAAGCATCCAAGTAAATTAGGCAGGGAGATGTTAACAACATGTAAGGTCAAGGATAACTCAATTAAAGAGGAGATAAATTTTCCCAAGTGGGAATGGCACATTTTTGCAAAGAAATAGTATCTGTATATGGCGAGGGAATGTGGGGAGGTACTCCACCATTTGT---CACATGGTAAAAATCTGTTCTTAATTTTCAGTCGATGGTTCTTCTGCTTCATAGCCAACGGCAGTATATCTTTGAATATGATTTGCTGGATCGGCTTTCTGCTGTCACCATGCCCAGCGTTGCTCGTCATACCATGCAGACTATTCGCTCCATTGGCTACTACCGGAATATATACAACCCCCCTGAAAGTAATGCTTCTGTTATAATGGACTACAATGAAGAAGGGCAGCTCCTTCAAACTGCTTTCCTGGGGACAAGCCGAAGAGTATTATTCAAGTACAGACGGCAGACCAAGCTCTCAGAAATTTTGTATGATAGTACAAGAGTTAGTTTTACTTATGATGAGACAGCAGGAGTCCTGAAAACAGTAAACCTCCAAAGCGATGGTTTTATCTGCACCATTAGATACAGGCAAATTGGCCCACTGATTGACAGACAGATTTTCCGCTTTAGTGAAGACGGAATGGTAAACGCCCGATTTGACTACAGCTATGACAATAGCTTCAGAGTGACTAGCATGCAAGGTGTCATCAATGAGACCCCATTGCCTATTGATCTCTACCAGTTTGATGATATCTCCGGTAAGGTTGAACAATTTGGCAAATTTGGAGTTATATATTATGATATTAACCAGATCATTTCTACAGCTGTAATGACTTACACAAAACACTTTGACGCACACGGCCGCATCAAGGAAATTCAGTATGAAATCTTTCGTTCACTGATGTATTGGATTACAATTCAGTATGATAACATGGGACGAGTGACAAAAAGAGAAATTAAGATTGGGCCGTTTGCCAACACCACAAAATATGCCTACGAATATGATGTAGATGGTCAACTCCAGACAGTTTACCTGAATGAAAAAATAATGTGGCGATACAATTATGACTTGAATGGCAACCTCCATTTGCTCAACCCCAGCAGCAGTGCCCGTTTGACGCCACTTCGCTATGACCTGAGAGACAGAATAACCCGACTAGGTGATGTGCAGTATCGATTAGACGAAGATGGGTTTCTGCGCCAGAGGGGTACTGAAATCTTTGAATACAGTTCAAAAGGCCTCCTCACTCGAGTTTATAGCAAAGGCAGTGGATGGACAGTGATTTATCGTTATGATGGCCTTGGACGACGAGTTTCCAGTAAAACCAGCCTCGGACAGCACCTCCAGTTCTTTTACGCAGACCTTACTTACCCAACCAGGATAACTCATGTATACAACCACTCAAGTTCTGAAATCACATCCCTTTACTATGACCTGCAGGGACACCTTTTTGCCATGGAGATTAGCAGTGGAGATGAGTTTTACATTGCATCTGACAATACTGGAACACCACTGGCTGTTTTTAGTAGCAACGGTCTCATGCTTAAACAAATTCAATACACTGCTTATGGAGAGATCTACTTTGACTCTAACCTTGATTTCCAGCTGGTAATAGGATTCCACGGTGGTTTATATGACCCACTGACCAAGCTAGTCCACTTTGGAGAAAGAGATTATGACATAATGGCAGGCCGGTGGACAACACCTGATATTGAAGTCTGGAAGAGAATTGGGAAGGATCCAGCTCCTTTCAATTTGTACATGTTTAGAAATAACAACCCAGCCAGTAAAATACATGATGTGAAGGATTACATCACAGGTAA ....x..:x......:.--...x::..:..:..::........:.x..:..::.x::.:x..x..x..x...::...:...:x.:x.x..::.....----.....x...:::............-.......x..:...:...:..::..:x....--:..:...x...:.:...:.:....x...:.....x....:.:.......:..........:.................:...........:..:.:..........:.:........................:x.:.:..x.-.....:.x.....:.------::...:..:---------.:......----..:x.xx:...x..xxxxx.:.-..:x..:..:::---...xx:....x.:.x......:xx...x.....x.......................:........:.....:.....:...x..:x...:..x..x.....::.............:..x.....:..:...........:..:..x.................x..:..............x.....:..:..:..::.:..x.:.........:..:.......x...:..x.....x......:....x.....:..:..:..x........:......x.......:.:...............:........:........:........:........:..............:..:..............:..:...........:..........................:..x...........:.......................:..:........:..xx..........:...........:.....:x.......:........:.....x........:..x...:.............x..:...........:..:..:..:..:.....:..:.....x..:.....................................................:..:..:..:........:..x..:.....:........:.....:.....:..x..:x.x..:..x.....:.............................x..:..:..x..:.....:.....:..x.....x..............x........:..:...........x.....x..:.....:...........x........:...........:.....:..:..::.......x...........:..x.....x..:.:......x...:....:..x...............x..........x..:.....:........x..:.....:..:..:........x..:..:..:..:.....:..x..............:..:..x..:..x..:..x...........:..:...........x...........:..:........:.....x...x.:..x.....:..:........:..x...........x.....:.....:..x...:.x.....:..x..:.....x........x........:..:.....x.....:..x.....x..:.....:..x..:.....:..............:..:........:.....:..:..:........x..:..:..x..:..............x..:........:..x..:.....x.....:.....:........x.....:..:.....:...........:x....:..:..:........x.....:..:.....::.:...........x.....::..:............................xx.......x.................:..x...:.......:..............:...........:..:..............:...........x..x..:.....x.....:.....:................. 17M2I78M4I24M1D31M2D143M1I15M6I9M9I8M4I22M1I12M3D1647M 1648/2006 82.2% 2033/94230402 0.0% 33/2006 1.6% 130033027 60181528 +12374 chr4 + 190214555 182796611 182796610 182797157 547 TTTCATTCTGAACATTCTTCTCCTAGATGTTAACAGCTGGCTGGTGACATTTGGTTTCCATCTGCACAATGCTATTCCTGGATTCCCTGTTCCCAAATTTGATTTAACAGAACCTTCTTACGAACTTGTGAAGAGTCAGCAGTGGGATGATATACCGGTAAGAAACAAAAAGACCTACGGAAAGGTGATAAG-TAGCTTGTGTCTTATCTACCCATATCTAATCAAAC---TACCCTTGTGAAAACTGTACCAAAGACAGTTTTTAACTT---TTTGACTGTTTTAGGGAAAAAAAACAACACTTCCTCTGCATTTGTGTTCA----------ACAAACCAGAGGCC-------------TCTTAAACAGGCTTAAATATGTTTTCAGCAATGCTAATGAAAACATAGAAATGC--------------AGAAGCTC----ACTTTCGAGTG---CTGGGTTTCTAAAAAGAACCCCAAGAAAGCG---------------TGGACCTGAAGGCAAAAA---------------------------TACAATAAACAAAAGGGCAGGGAACTCATATTACAAATTA-GCAAACCACAAACAATGCCACAAGGTTCAACTTCT-TTAAAAATTAACAGTGTTTT chr4 - 94230402 52763569 52763568 52764179 41466224 41466223 41466834 611 ttttttttcaaataattCTCTTTCAGATGTTAACAGCTGGCTGGTAACATTTGGATTCCACCTGCACAATGCCATCCCTGGTTTTCCTGTTCCAAAATTTGATTTAACAGAACCTTCTTATGAACTTGTGAAGAGCCAGCAATGGGAAGATATACCTGTAAGAATCAAAGCTAAGTGTACAAATGAAAGAAGATAGAATAT-TCTCTTCTATTCAGATTAAGAGGAATGGATAATCCTGATGAGGCTATTTCATAA------TTTAATCTGAATTGCACTTTTC----------AAATATCTATTTTTATCTATTTATTTTCAAAAGAATTTTAAAAATTACAGACTTGCTATGTACAAATTTTAAGTAAGCTTTTGTTTGCTTTCAGCAA---CAGTAAAAATATAGAAGGACAATAATCAATGAAAAGGAGTTTAAGAACCTTTGAAGATATCTAAGTTTCCTAACAGAAACTACAGAGATTAGATTTGTACTAACACTCTGCCCAAAGGCAAAAACTGAACAGCGCAGCAAAAAATAGACTGTGAAATAAACAGAAGAACAGGTGA-------TATAAATTATGCATAC--CAGGCACCACTACA--GTTTTACTTCTCTTTAATATTAACTACGCTTT ...:x..:::..:.x.::...:::.....................:........x.....:...........:..:.....x..:........x..........................:..............:.....:.....x........x.......x....:xx.xx.:::x...x.x:.x...-...xx.:.-...:x....::..x..:x.:xx:..:---..x:.:..xx:.::..:.x:..x.:------.....::.---..xx...x..:----------...:.x.xx..::.x.x:....:.x....----------.x...::.x..:.:-------------.:....::.:....xx:.x..:.........---:.:.:....:......:x:.--------------..:..:.:----..:..:..:x:---..::.....:x..x....x.:xx...:.x::---------------.xx:..::..........---------------------------.:x........:...::....x:.-------..:......-...x..--..::..x::.:...--...:x......-..x..x......x::.:... 192M1I8M1D26M3I25M6D8M3I11M10D29M10I14M13I31M3D20M14I8M4I11M3I31M15I18M27I24M7D9M1I6M2D14M2D11M1I20M 361/516 70.0% 611/94230402 0.0% 126/516 24.4% 130033042 60181513 +156104 chr4 + 190214555 182799573 182799572 182803732 4160 CCCCTCTTTTGTTTCGCCCGCAGCCCATCTTCGGAGTCCAGCAGCAAGTGGCGCGGCAGGCCAAGGCCTTCCTGTCGCTGGGGAAGATGGCCGAGGTGCAGGTGAGCCGGCGCCGGGCCGGCGGCGCGCAGTCCTGGCTGTGGTTCGCCACGGTCAAGTCGCTGATCGGCAAGGGCGTCATGCTGGCCGTCAGCCAGGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCCGTGCTCAACAACGCCTTCTACCTGGAGAACCTGCACTTCACCATCGAGGGCAAGGACACGCACTACTTCATCAAGACCACCACGCCCGAGAGCGACCTGGGCACGCTGCGGTTGACCAGCGGCCGCAAGGCGCTGGAGAACGGCATCAACGTGACGGTGTCGCAGTCCACCACGGTGGTGAACGGCAGGACGCGCAGGTTCGCGGACGTGGAGATGCAGTTCGGCGCGCTGGCGCTGCACGTGCGCTACGGCATGACCCTGGACGAGGAGAAGGCGCGCATCCTGGAGCAGGCGCGGCAGCGCGCGCTCGCCCGGGCCTGGGCGCGCGAGCAGCAGCGCGTGCGCGACGGCGAGGAGGGCGCGCGCCTCTGGACGGAGGGCGAGAAGCGGCAGCTGCTGAGCGCCGGCAAGGTGCAGGGCTACGACGGGTACTACGTACTCTCGGTGGAGCAGTACCCCGAGCTGGCCGACAGCGCCAACAACATCCAGTTCCTGCGGCAGAGCGAGATCGGCAGGAGGTAACGCCCGGGCCGCGCCCG--------------------------------------------------------------------CCGAGCC---GCTCACG-CCCTGCCCACA-TTGTCCTGTGGCACAACCCGAGTGGGACTCTCCAACGCCCAAGAGCCTTCCTCCCGGGGGAATGAGACTGCTGTTACGACCCACACCCACACCGCGAAAACAAGGACCGCTTTTTTCCGAATGACCTTAAAGGTGATCGGCTTTAACGAATATGTTTACATATGCATAGCGCTGCACTC-AGTCGGACTGAACGTAGCCAGAGGAAAAA--AAAATCATCAAGGACAAAGGCCTCGACCTGTTGCGCTGGGCCGTCTGTTCCTTCTAGGCACTGTATTTAACTAACTTTAAAAAAGAAAAAAAAATGTGTACAGTGTTTCCAAATAGTCCCGAATTGTCGACCTTTGCTTACAAGAAGTAGTCTGT----------------------------CTGCATAGGATGTGATAGCTATCTCTGTTCATTTTACAATGTGGGGC-AAAGTTACTGTTTCTAGACAACCCAACTGCTTT-CCCTGTGCAGCTTTGTAGAAGGACATTGGCAC-AGTGACTT---CTGCGGCGGGGATTTATTAATGGATTTTACAATGCTAACGTGGTTTCCCTTCGGGGAAA-AAACTGGCAACTAGAATCCTTGTCACTGATAAGCAAAGGAAATCCTGATTTTTTTGTAAATTATGTGAGACAAGTTGTTTATGGATTTTTATATGAATTACAATTTACTGTACATCAAATCTTAGTCTCAGAGGAGTTAATTTATGTAAAGTGTTTAAAAA--TTTATACTTAAAAATAAAATGATAAAAACGTGAAC--TGTGTGATTTTTTT------AAAAGGATTGCACCTTTTGTTATCTGTTATAGCTGTACAGTATGAATTATTATATTGTAGAGATATAACAACTTATGCCTATAATGTCCAGAAGTGTTAATATTTTTGTATTAGGTTGAAAAAATGTGCAAGCTTCTATCACTAGATGGATAGGACCGTGCAATTCTAGGTGGGTGGC-GAATCAGA---GAGCTCCTTTCTCTTCCCTCTCTCACGCAT----CAGGCCAGTGT--CCTCAGCATTGTCAACTGAGAGGCACAGTAGACAACTAGGGCTGGTGGAATGTAAGGGAAGA-------AGATTGAAAAAACGGGAGGAAGGGTTCTCTGGCCCTCTCTCAACCTTGC--AAGTCAATGGGGAGTTGTTGATATAATTAACCCCGAGGTTTTTACTGTTACTGTTCCA-AAGCTCTGTCTCTTGATGGAGGAGAGACCACATCAGATGCTGGGGAAA-------TAGGAGGAGGAAAGGTTCTGATGTAGTC-------GTGATCCTAAACACGT-------------------------GTCTTAAGATCTAGGAAAGACAGCAGAAACCGAGC------------------AGTGGTGGGTGAGCCAGATGGAGCCGGTCAG--GGTTA--CTCTAAGCCCACA-TGACCAAACCATCT-----------------------------TGGGGGGCTGGTTTGAATGACAGCCTCTGCTCTGTCTCGGGGAAGC------CGGGGGTGGCA------GATCCA---------------GCTGGAAG--TGAACTGA------CAGCCGCGCCCTCCT-GCACACATGCATGCACGCGTGTGGGAACGAGCCCAGCCGCCATCTGCACTTCCGTGTCGGCTCAG------CTCTGACAAATCTCTTTCCTGAGCACTAAATTCAGCCACGA----AAATATTTTTAGAA--------------GATATTTCTCA-GTTCATCGAGCTATAGTACACACTGTTTTCC-TCTATGTATAATGGTGATAAAATATAGCAAGTGAACATGTCGTAAATATAAA-GGTTCAAGT-GATGTATTGAAAATAATTTTCTAACTGCTTTGTAT--------------GTATCACATACTCTAAATTGCACAGTAGGCGTGTTTATTAAACAGA--TGATTGGCTGGGAAAGTTTCAAAATAGCTACTGAATTTACAGTATCAGTGCTATTACTGTCTTTGTGTATTTGGTAGAGCATACCGAAGTAATTAATCTTCTAATGAATGCTGATGATATTTTATTAGAATGAAAGCACAGATTAG-CATTAATATTTTTTATTCTGGAAATCCTTTGGCAAGTATTATGAAGCCCAAATTTAGAAAACTATGAGATTTCAAACCACATAAACATGATTCTGTTTTCCATTTTATT-----TTTTAACTGTTAGGTATTTGCAGTTCTGTTCCGTGGAACTTCTGCAGGCCTGTATTTAGCATGCTGTAAGTACTTTTGGGTGAAATAGGCTCTGAGTCTAAATTCTCAGACATGTTTCTGATGTATT--ACCATGAAAAGCTTGTGCCACATGACAGAAGTGAGATCATAGTCTTAACCTCTTCTTGACGTGGACTGGT--------CTTCACTCGGGCACCGATAAATAACAGATTTGGAGTATCTCCTGGTGCTTATTTTAGATGATGAAGTCAAATCAACCCAATTAGTGTCCT-GTTAGTAGGTATAATGAGCCTATTTCTTTCT-AAAAAGACTTGTGATCTGGACATGCTTTTACAAGAAATAGTGACCTTGGGGAATATGTAAACA----AAAGACCTTTTTCTAAGAGTTGGGAGGGGGTGGGGGACTGTATAATGAAAAGAATTAGCTTAC-------------------AAAAAAGAAATTGATATTCAAAGTATTTTAGGCAAAGCCAGTCAAAATGCTTTCATGATATTTTGAGATGTAAATTTTGTCTGATTTGTATTGTTCTTTTCATTTGCCTTCTTAACTTTATATGTGACCTGAATTTTCCATAACTTGATGACTATAGATTGCACCTAGGCATTCCAATAAAAGCCAACCCAA--------TGTGTGTGTGTTTTTATATTT---TTTCAAGTCT-TGGGCTAG-----CCAGC------ATTGCTTTTGTGTTTAACGTGGAGGACGCAAATAGATGCAGTTGTTGGGGAATTGATTCATCTGCAACCCAGTTGGTAGTATCTTTTTTTTTTTTTTTTTTGTCCATTGGC-CAGACTGCTGGCTCAGCAGAGTGAACTTCACAGGGGACTCTCCCA--TGGCCTACTTTAGA-AAAACAGTAAACACACCCCCACAAAGCCAAACACGCTAACTGTAAAGAAGAGTT-----------TACAAAAATACCACCCATTACTACTTGAGAGCAGGCCTCATTCCTGTGATCCTG-GCAATAAGTGTGCTTAATTAAAACACTTGATTA-GAATAATCAGTTTGGGCCTGGTAG----GCTTGCAGCCTCCTGGAGATGTCTAAATCTACATATAGACCGGCTGATTAGAAGATGCTTAGTTCAGCAATTCTGGCCGGCAGGCCAGGGCTTTGATTTTAGTCGGAAGAGGCAGACTTCATCACACTTGCTTTCTAGTGACAACCTCAACTGCATAACGTGTTGATCCAGCAAGAATCAGGTCATTCCACTTGGCAAACTG----------GTCTGTTTTCTTCTCCTCGAATTAGACTTTAA----------CATGATCAAA-----------ACGGAATTCCA---------GAAAAACAGGCGAAGTACTGCTTTCCTTCTCTACAGTCTTTTCCTTAAAAGTAATGTCTGAACAAATGCAAATAAAAA chr4 - 94230402 52767034 52767033 52771461 41458942 41458941 41463369 4428 CTTCTGTCTGTTCTTGTTTACAGCCAATTTCTGGAGTGCAACAACAAGTGGCGAGACAAGCAAAGGCTTTCCTTTCCCTGGGAAAGATGGCAGAAGTGCAGGTCAGCAGACGGAAATCCAGCGGAGAGAAGTCATGGCTGTGGTTTGCCACCGTGAAGTCTCTGATCGGGAAAGGGGTGATGCTCGCTGTCAATCAAGGGAAAGTGCAGACAAACGTGCTTAACATTGCAAATGAGGACTGCATCAAAGTGGCAGCTGTTCTGAACAACGCCTACTACCTAGAAAACTTGCATTTCACCGTTGAGGGAAAAGACACGCACTATTTTATCAAGACCACCTCCCCTGAGAGTGACCTTGGGACACTGCGGCTGACCAGTGGGCGGAAGGCCCTGGAGAACGGCATCAATGTCACCGTGTCCCAGTCCACTACCGTGGTGAACGGCAGGACTCGCAGGTTTGCCGATGTTGAAATGCAGTATGGTGCGTTAGCGCTTCATGTCCGATACGGCATGACGCTTGATGAGGAAAAAGCCCGAATACTGGAGCAAGCCAGGCAAAGAGCTCTTTCCAGTGCCTGGGCCAGGGAACAACAGAGAGTAAGGGATGGAGAGGAAGGTGCCAGGCTGTGGACAGAAGGAGAAAAGAGGCAGTTGCTAAGTGCTGGGAAGGTACAAGGATATGATGGGTACTATGTACTCTCTGTGGAGCAATATCCAGAATTAGCAGACAGCGCCAACAACATACAGTTCCTCAGACAAAGTGAGATAGGAAAGAGGTAACACACTGGCTTAGCTCAGGCTGCCAAAGAGACTGTGTACCAGTGTCTTCTAAAAAGGAGACCAAACTGTTTTGCTGCATTACTACTTGAGCCTAAGCTTACATCTTTGCTCAGATTTTTTCTGTAGCACAATCTGAAC-GGACTCTGTAACG---AAAAGAGCGCCTTCCAGAAGAATGATACTGCTA--ATGAC----------------AAAAC---TTTTTTTTTTTTCTCAATGACCTTAAAGGTGATCTGCTTTAAAGAATATGTTTACATATGCATATCGCTGCACTCAAGTTGGACTGAAAAGTATTAAATAAAAAATTAAGAAAAGAAGAAAAAAAGGCCTAAAGATTTTGCAACAGTCTGTCTGTTGCTCTGAGGCACTGTATTTAATTA------------AGATACAGACCCGTACAGTGTTTCCAAATATTACTGAATTGTTGACCTTTGCTTACGAGAAGTAGtctctctctttctctctctttttctctTTATCACTGCATAGGATGTGGTA--TATATCTGTTAATTTTAAAATGTGGGACAAAAATTACTGTTTATAGACAACCCAACTGCTTTAAACTGTGCTGCTTTCTAAAAGGACATTGGCACAAGTGACTTACGCTACCATGGGAATTTAATAATGGATTTTACAATGCTAACGTGCTTTGCCTTGGGGGGAATAAAACGGCAAGTAGAATCCTTGTTACAGATAAGCAAAGGAAACCCTGATTTTTTTGTAAATTATGTGAGACAAGTTGTTTATGGATTTTTATATGAATTACAATTTACTGTACATCAAATATTAGTCTCAGAGGAGTTAATTTATGTAAAGTGTTTAAAAAAGTTTATACTTAAAAATAAAATGATAAAAACATGTGCTGTGTGTGATTTTTTTAAAGAAAAAGGAATTGCACCTTTTA-----TGTTATAGCTGTACAGTATAAAGTATTATATTGTAGAGATATAACAGTGATTAC---TAATGTCCAAAAGTGTTAATATTTTTGTATTAGGTTT-AAAGCTGTGCA----TCTATCACTCTGCTGATAGGATGGAACACTCCAAAGTGGCTGGCTGAATCAAACTGCAGCTCCCTTCCCTCCCCTACCTCTCCTGTCACCCAGGCCAGTGCCACTTCATCATTGT----TAGGAGGCACAGTAACCAAATAAGTCTCGTTTATTATGATGGAAGACTTTAATAGGTTG---------------GGTTTTCCTTGTCTTTTTCCAGCCCTAATGTAATAAATGGACATTTATTCAT-------ACCAAGTGGGCTTT-CTGTTGTTTTTTTAGAAGCTTTGTTTCACAATGGAGAGAGTAGTGTCTCAGGTGCTTGGCAAACTGTACGTAGAAGAAGAAGAAGAAATGGTGTAGTTTCATCCAGTTATGTCAACTTTGTCTTCTGTATAGTACAGCTCTTTTAGATGTTATAACTCCAGATAGATAGAAGAAGCGTACCTCTGACCTGATGCTACTAAATTGCTCTTCAGGCAGGCAG-GCTGTTCAGTAGGTTCATCTCCTGGCCTTCAGCTGCCAGATCACATCCCATTACTGTGAAAACTGAACACGGGGATGGAGAGGAAAGTCTAATCCTAGTGCCTAGTCTGCATCTCAACACCACTGCACAGATATGGCATGCTCTGCTCCAAGGCCCAGCATATTTGCTGTAAGACATAACTGAAGCATGCAGCTGGTTCCTTATAGGAAGCCTGCAGGGGCATCTATGG----------------CATCTGTTC-TACATCTTGGCTGAAACCATTCTCTGA-GCTTTACTCTCACGAGCACTAAATTCAGCCACAAAAACAAATATTTTTAAGATGAGACAAAATTGGGGTTTTTTTGATGTTCATTGAAATA---TACACAGTTCTTTCTATCCATGTATTATAATGACAAAACATAGTAAGTGAACGTGTCTTAACTATGAATGGTTCAAGTGGATGTAATAAAAATAGTTTTCTAACTGCTTTGTATTCTGAGAGTCTATGGTATTACATACTCTAAATTGCACATTAGGATTGATT----AACAGATTTGAATTTCTGCCAG-----CCAAGTTGCTACCGAATCTACAGTATCAGTGCTGTTACTGTACGTGTGTATTTGGTAGAGCATACAGAACTAATTACACATATAATGAATGCTAATCA---TCTATTAGAATGAAAGCACAGAATAGTTGTTAGTATTTTT----------ACCCTTG---AAGCCTTGAGGGCCCTAAATTTAGAGAG-GACGATATGCCAGACCCCAGAGGTGTG----TGATCTACGTATTATTTAAGATGTAAAATGCTAGGTGTTTGCAGTTCTGTTGGGTGGCTCTTCCACAGCACTGTATTTAGCATGCTGTAAGTGCTCTCTGTTGAAATAGGCTCATATTCTAAATTATGTCAAATGTTTCTGTTCTGTTTGAATATGAAAAGCGTGTATAACGTATCAACAATGAAATA-------TATCTTCTACTTGACGCGTACCAGTTCCTTCTCCTTTGTTCTGGCACCAATAAACAACAAA-TTATAGTATCTGCTGGTGATCATTTTA---AATAAAGCCAAATCAAGCCAATTAGTGACCTCGTTAGTAGGTATAACGAGCCTATTTCTTGCTAAAAAAGACTTGTGATCTGGACATGCTCCTGCAGGAAATAGTGACCTTGGGGAATATATAAACAAAAGAAAGATCTTTTT---AAAGTTAAAATA-----------TGTATGGTTAAAAGAAGCATATTACaaagaaaaaaaaaaagaagaaaaaaagaaaGGAGATT--AAGTATTTTAGGCAATGCCAGTCAAAATGCTATCCTGATATTTTGAGATGTATATTTCATCTGATTTGTATTGTTCTTTTAATTTGCCTTCTTAACTTTATATGTGTCCTGAATTTTCCACAAATTGATAACTATAGATTGCATCTAGGCTTTCCAATAAAAGCCAACCCAAtgtgtgtgtgtgtgtgtgtgtTTATATTTGTCTTTCAAATCTGTATGTCAGGTATTACAGCTGTGCTATTGCTTTCCTGGTTCTATCGGAAGAAGCAAACTGATCCAGTTGCACTGGTATTGATTCATTTGCTTCACAGTCGGCTGTGTC-TTTTTTCCCCCTCCCCTGTCCAATGGCTTAGTCTGCTAACTCAGCAAAGTGAATTACTCCATGGGATCTCTAAGGTGGCCTACTTTAGAGAAAACATTAAACATA-CTTCACCAAGTCAAATCTTTTGTAGATAAAGAAAAGCCAAAGAGCAAAAAAAAAAAAAACAAAC--TCACCAATT-AGAACTGTTTTGTCTCGTGTCCTCCAGAGTAAGAAATACGACAAA--AAAACATTTGATTATAAATAATTAGGTTGGCATTGGTAGTTACACTTATA-CACCGAAGAGATCCTTCAATCTGCATTTAGACCCACTTCGTAGAAACCGCTGACTTCAGCACTACCGTATGTCAGGAGATGGCTTTGATTTTAGTTGGAACAGGCAGACTTCACCACACTTACTTTGTAGTGACAACCTCAAGTTGATAACATGTTGATCCAGCATGAATCAGGTCACTCTGCTTAGCTAACTGTGCCCtaattttttattttttttttttaaaaaaaGCCAGTAAGAGAGCTTTGTATGTTCACACTTGGGAGGTGAGAGATTTGCATTTGACAAGGAAAAAAATGCCAGTTACCACTGCCACTCTTCAGAGGC---ACTTTTAAAGTGATGGCTGAAAGACTGTAAAAGAAGA .::..x.:.xx.:.:.::::.....x..:.::.....x..:..:.........x.:..:..x.....:.....x..x.....:........x..:........x...x.:..xx::x..:....x.x.x....x...........:.....x..x.....x........x..:..x..x.....x..:....::..:..xx:x........x........:.....:..x..:..............:.....:..:..x..x..........x......:..:...:....:......:.:.....x..:...........:..:............x.x..:.....:.....x..x..:......:.......:..x..x.....x.................:..x..x.....x........:..x.................x........:..x..:..x..:.......x:..:...:.:.....x..:..x..x...........x..x..:.....:..:..x..x..x........:..xx....:x.x..x..:x..x.x........xx.x..:..:...x.x..:x.x..:..x.....:..:..xx.x..x.....:..:..x..:...x.....:....:..:..:..x.....:..:..x..:..:........:........x........:..:..x..::.:..x.................x........xx.:..:..:.....x..x.:........:.x.x...:xx..:.:--------------------------------------------------------------------::.....---...:..:-.::...:..x.-..x.:....:......:.:..::-.......x:....---..:..xx:x...:..:.::......x......:--.:...----------------.....---xx::x:.......:x...................x.......x.....................x..........-...:........x:xx:::.:.x:.....--..:.xx.xx.:::.x........x:.xx.x....:x::.x.:.......x..::x...............:..------------.:.x.x.:.:x:..................x.x.:.......:.............:...........x.----------------------------..............:..--...x......x......x........:.-...:.........x...................-xx......x.....x..:..............-........---..:.x::...:.....x.........................x...x....x....:..-...x:.....x............:..x...............:.............................................................................x........................................--.............................:..x:.--..............------...:.:............:-----...................:..x.......................::xxx.:.---.........:..........................x-...:x......----.........xx::x.......:x.x:..x.:.x.:....x....-......:.---x......:...:..:....x:...x.x::.----..........:--.:...x......----.::...........:x...x..:.x..x..xx.x.:.:.x......-------..:...---------------..x..::..x.:.:.:.::..:..:.:x--x.:.x.....:x.x..:..x..-------...xx.x..x:...-.....::.x..::.-.....:...:..x::......::::x.x:::x....:....x..x...-------...:..:..:.:.:.xxx..:......:-------..x..x::..x:x:..-------------------------:.x...x:.:::x:..x...:..x....:.xx.x.------------------.:.x.:xxx.x..x...:::.-..:.x....--....x--...:x:...:x..-:x:...:.:..:x.-----------------------------...:.:.xx::x.:x...xx:..:x:..:x....:x..xx::x.x.------.:.:x:.....------.x....---------------....x...--xx......------....:.xx:...:x.-.x.x:.x....x.x:.::x.:...----------------......:x.-.x.:.x.:....x.:------......-:xx.:x..:..x:...................:.----...........::.--------------.:.x...:.x.-......:..:x..---......x.x:....:-..:......x..::...:....:....:........:....x...x...:..-.........-......x.:......:...................--------------....:...................x....xx..x..----......--...x.xx...xx.:-----.x..:.x.....:....:...............:.......x:x.....................x...x......xx.x.x...........:..x.---.:....................x...-::...:.......----------.:....x---...:x..:x.::x..:.........:.:-x.:..x..x:..:...x..x.::::..----..x.:.x.:.x.....-----.x.x..x..:.....:..............xx....xx....::...xx......................:..:.:x.x............xx.x........x.xxx.x.........x.x.:..--.x:.........x...::x..:.:x..:x.:...:..x-------..x.:...x.......:.x..::..--------...:::..x......:.....:....:.-..:x.......x......x.:......---:..:...:........x..........x...-..............:.............x..-..........................::.:..:.......................:......----.....:......---.:....:::.x:-----------.....::.x.......x:.xx....-------------------......::..xx..x...--...............x...............x..x.................x....::.....................x.........................x.............:..x.....:.............:......x.....................--------...........x.........---......:...-.:x.::..-----x....------........:x..x..xxxx:...:..x.....:x...x......:xxx..x..........:...xx.x....:..:x..:..-......:::::.::::......x....-:..x.....::.......:......:.x.x.x:x..:x....:x.--..............-......x......:.-.::...x...:....:x:x:.:xxx:.......:..::-----------x.x.....x..x.x.--.:..:.x..-...:.x.x::.xx:..x...xx...x.-.:..x..:.::.x:x..--......:.......-:......:..x....xx:......----:...::.-.x:.xx:.....x::.x.....:...x......x:..xxx.....:x:...x.x.......x.x.:.xx:.x....xx.x...............:....x............:.......:....x...............x.xx.....:.............x...........:..::...:..x.....----------x.:.:....:..:.::.x:..xx..x.xx...----------:...x...x.-----------.x:..x..x..---------......x.x..x.:x...::..x:.x:...::.x..x.---x.:..x.....:...x.....x:.x..:...x:..:. 796M68I7M3I7M1I11M1I23M1D13M3D33M2D5M16D5M3D75M1I29M2I73M12D70M28I17M2D28M1I33M1I32M1I8M3I59M1I161M2I35M2I14M6I19M5D54M3D37M1D11M4D44M1I8M3I30M4I11M2I12M4D46M7I6M15D28M2I22M7D14M1D14M1I48M7I28M7I16M25I35M18I21M1D9M2I5M2I13M1I14M29I46M6I11M6I6M15I8M2I8M6I15M1I24M16D9M1D15M6I6M1D34M4I14M14I11M1I13M3D15M1I52M1I9M1I35M14I36M4D6M2I14M5D98M3D26M1I13M10D7M3D28M1D27M4D16M5I127M2I38M7D25M8I28M1D27M3D31M1I31M1I63M4I12M3D12M11D25M19I18M2D172M8I21M3I10M1I8M5I5M6I83M1D27M1I45M2I14M1I15M1D38M11I15M2D9M1D27M1I17M2D14M1I24M4I7M1D194M10I32M10I10M11I11M9I38M3D37M 3041/3991 76.2% 4428/94230402 0.0% 606/3991 15.2% 130032539 60182016 +4357 chr4 + 190214555 182831805 182831804 182831940 136 ATCCTCCTTCTCCTCTCCCCCTCTTCTCCTCTC---CCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCCTCCTTCTCCCCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTC chr4 - 94230402 61964788 61964787 61964934 32265469 32265468 32265615 147 ATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ..::.......:.:.....:...:.........---:.:......:x..x:x.x.x.x.......::...xxx..:.:......-.x.....:-------.........x:x..:.::x:x.....:.:.x::.xx.x..x....:. 33M3I48M1I8M7I47M 92/136 67.6% 147/94230402 0.0% 11/136 8.1% 120867017 69347538 +3286 chr4 + 190214555 182831806 182831805 182831934 129 TCCTCCTTCTCCTCTCCCCCTCT-----------TCTCCTCTCCCCTCCTTCTCCTCT--CCCTTCCTTCTCCTCTCCCCTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCC chr4 - 94230402 83016316 83016315 83016457 11213946 11213945 11214087 142 TCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTCAGCCACCAGCCCCATCTGCTGCCCC ..:.....xxx....x.::.x..-----------..x:......:...:....x....--.:....:..x:......x:.:x.:...:...x.::xx.:....x...:.:::.:...xx.:x:.xx.:..x...x..x:... 23M11I24M2I82M 82/129 63.6% 142/94230402 0.0% 13/129 10.1% 99815490 90399065 +3706 chr4 + 190214555 182831834 182831833 182831969 136 TCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCCTCCTTCTCCCCTCCC--------------CTCCTTCTCC--TCTCCCCCCTTCTC-CTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 61964780 61964779 61964932 32265471 32265470 32265623 153 TCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCT ....:x:.x:..::.:...:..:...:..........:...:..::::...:..--------------.......:..--x........:..x.-...::.x.xxxxx.........x:x..:.::x:x.....:.:.x::.xx.x..x.... 54M14I10M2I14M1I58M 88/136 64.7% 153/94230402 0.0% 17/136 12.5% 120867054 69347501 +3853 chr4 + 190214555 182831863 182831862 182831969 107 TCCTCTCCCCTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 92174835 92174834 92174948 2055455 2055454 2055568 114 TCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTT ...xx:.......:.:.:::......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..:::....:..:..:. 69M7I38M 70/107 65.4% 114/94230402 0.0% 7/107 6.5% 90657028 NA +3699 chr4 + 190214555 182831887 182831886 182832003 117 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCC-----CCCCTTTTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.x.-----:.:x::...x:x.....x.:x::::.:............ 78M5I39M 72/117 61.5% 122/94230402 0.0% 5/117 4.3% 90657059 NA +3669 chr4 + 190214555 182831907 182831906 182832048 142 TTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTTTCCTCTCCCCTCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCTCCTTCT-CCTCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964790 61964789 61964934 32265469 32265468 32265613 145 TTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTC------CTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ..::.:...:......:..........:.:...:..:..------.:.:.x.:x.x.x:x.x..:....::...xxx..:.:..:...-.x.....:-------.........x:x.:::..-.x..:.....:x.:.xx.x.:x...... 39M6D43M1I8M7I18M1I28M 90/136 66.2% 145/94230402 0.0% 15/136 11.0% 120867117 69347438 +3868 chr4 + 190214555 182831918 182831917 182832035 118 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTTTCCTCTCCCCTCCTTCTCCTCTCC------CCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCT--CTCCCTCCCCTCCTTC .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.x.------.:x.....x.x..:..x..x..--::.:............ 78M6I22M2D16M 77/116 66.4% 122/94230402 0.0% 8/116 6.9% 90657090 NA +3257 chr4 + 190214555 182831947 182831946 182832093 147 CCCCTCCTTCTCCTCTCCCCCCTTTTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCC chr4 - 94230402 83016315 83016314 83016457 11213946 11213945 11214088 143 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCAT----CTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTCAGCCACCAGCCCCATCTGCTGCCCC .:.:.....xxx....x.::.x:.:..:x.xx:x...x.----......:...:....x....:..:::::.:.x.:...:.x...x:...:..:.x.:.xx:.:..:x.....::::.:..xx.:x..xx..::x..:x..x.... 39M4D104M 82/143 57.3% 143/94230402 0.0% 4/143 2.8% 99815632 90398923 +3548 chr4 + 190214555 182831974 182831973 182832088 115 CTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCT--CCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT chr4 - 94230402 83016354 83016353 83016470 11213933 11213932 11214049 117 CTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTCAGCCACCAGCCCCATCTGCTGCCCCAGCCTTGTGCTTT ......:...:....x....:..:::::.:.x.:...:.x...x:...:..:.x.:.xx:.:..:x.....:.:...::--..x.:xx....x...x..x:...xx....x.x..:. 79M2I36M 72/115 62.6% 117/94230402 0.0% 2/115 1.7% 99815620 90398935 +3659 chr4 + 190214555 182832009 182832008 182832190 182 TCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCC---------TTCTCCTCTCCC-CCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTC chr4 - 94230402 61964741 61964740 61964934 32265469 32265468 32265662 194 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTAT------TTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ..:...::.....:x:.:.xxx:.xx..x..xx..:x.:::...x:.x.------..::.:...:......:..........:.:...:..:..:::..x.:---------.......::...-xx..:.:..:...-.x.....:-------.........x:x..:.::x:x.....:.:.x::.xx.x..x....:. 49M6D47M9I12M1I13M1I8M7I47M 110/176 62.5% 194/94230402 0.0% 24/176 13.6% 120867268 69347287 +3975 chr4 + 190214555 182832020 182832019 182832126 107 TCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 92174835 92174834 92174948 2055455 2055454 2055568 114 TCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTT ...xx:.......:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..:::....:..:..:. 69M7I38M 71/107 66.4% 114/94230402 0.0% 7/107 6.5% 90657185 NA +3808 chr4 + 190214555 182832023 182832022 182832159 137 TCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCC---------TTCTCCTCTCCC-CCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTC chr4 - 94230402 61964780 61964779 61964934 32265469 32265468 32265623 155 TCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ....:x:.x:..::.:...:......:..........:.:...:..:..:::..x.:---------.......::...-xx..:.:..:...-.x.....:-------.........x:x..:.::x:x.....:.:.x::.xx.x..x....:. 57M9I12M1I13M1I8M7I47M 90/137 65.7% 155/94230402 0.0% 18/137 13.1% 120867243 69347312 +3815 chr4 + 190214555 182832044 182832043 182832157 114 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 92174828 92174827 92174948 2055455 2055454 2055575 121 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTT .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..:::....:..:..:. 76M7I38M 72/114 63.2% 121/94230402 0.0% 7/114 6.1% 90657216 NA +3712 chr4 + 190214555 182832050 182832049 182832221 172 TCTCCTCTCCCCCCTTCTCCTCTCCCCT-----CCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCC---------TTCTCCTCTCCC-CCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTC chr4 - 94230402 61964741 61964740 61964934 32265469 32265468 32265662 194 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTC-CTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ......:.::.:.:x.:..xxx..xx..-----...x:.:....x::x::...-.:...:......:..........:.:...:..:..:::..x.:---------.......::...-xx..:.:..:...-.x.....:-------.........x:x..:.::x:x.....:.:.x::.xx.x..x....:. 28M5I20M1D43M9I12M1I13M1I8M7I47M 110/171 64.3% 194/94230402 0.0% 24/171 14.0% 120867309 69347246 +3815 chr4 + 190214555 182832075 182832074 182832188 114 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 92174828 92174827 92174948 2055455 2055454 2055575 121 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTT .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..:::....:..:..:. 76M7I38M 72/114 63.2% 121/94230402 0.0% 7/114 6.1% 90657247 NA +3650 chr4 + 190214555 182832081 182832080 182832250 170 TCTCCTCTCCCCCCTTCTCCTCTCCCCT-----CCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCC---------TTCTCCTCTCCC-CCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCT--CCTCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964741 61964740 61964934 32265469 32265468 32265662 194 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTC-CTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ......:.::.:.:x.:..xxx..xx..-----...x:.:....x::x::...-.:...:......:..........:.:...:..:..:::..x.:---------.......::...-xx..:.:..:...-.x.....:-------.........x:x..:.:--.x..:.....:x.:.xx.x.:x...... 28M5I20M1D43M9I12M1I13M1I8M7I17M2I28M 112/169 66.3% 194/94230402 0.0% 26/169 15.4% 120867340 69347215 +3815 chr4 + 190214555 182832106 182832105 182832219 114 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCT chr4 - 94230402 92174828 92174827 92174948 2055455 2055454 2055575 121 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTT .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..:::....:..:..:. 76M7I38M 72/114 63.2% 121/94230402 0.0% 7/114 6.1% 90657278 NA +3908 chr4 + 190214555 182832112 182832111 182832299 188 TCTCCTCTCCCCCCTTCTCCTCTCCCCT-----CCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTC chr4 - 94230402 61964741 61964740 61964934 32265469 32265468 32265662 194 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTC-CTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTC------CTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ......:.::.:.:x.:..xxx..xx..-----...x:.:....x::x::...-.:...:......:..........:.:...:..:..------.:.:.x.:x.x.x:x.x.......::...xxx..:.:..:...-.x.....:-------.........x:x..:.::x:x.....:.:.x::.xx.x..x....:. 28M5I20M1D35M6D43M1I8M7I47M 114/181 63.0% 194/94230402 0.0% 20/181 11.0% 120867371 69347184 +3830 chr4 + 190214555 182832137 182832136 182832253 117 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCT--CTCCCTCCCCTCCTTC .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..--::.:............ 76M7I23M2D16M 76/115 66.1% 122/94230402 0.0% 9/115 7.8% 90657309 NA +4038 chr4 + 190214555 182832168 182832167 182832284 117 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCC------CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCC-CTCCCCTCCTTC .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.x.------.:x.....x.x..:..x.:x:.....-............ 78M6I26M1D12M 78/116 67.2% 122/94230402 0.0% 7/116 6.0% 90657340 NA +3990 chr4 + 190214555 182832222 182832221 182832331 110 TCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCT-------CCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTC chr4 - 94230402 92174835 92174834 92174949 2055454 2055453 2055568 115 TCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCT--CTCCCTCCCCTCCTTC ...xx:.......:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.-------:.:x.....x.x..:..x..x..--::.:............ 69M7I23M2D16M 75/108 69.4% 115/94230402 0.0% 9/108 8.3% 90657387 NA +3952 chr4 + 190214555 182832225 182832224 182832376 152 TCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTC-CCCTCCTT-------CTCCTCTCCCTTCCTTCT-CCTCTCCCTTCCTTCTCCCCTCCCCTCC chr4 - 94230402 61964780 61964779 61964934 32265469 32265468 32265623 155 TCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTC------CTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ....:x:.x:..::.:...:......:..........:.:...:..:..------.:.:.x.:x.x.x:x.x.......::...xxx..:.:..:...-.x.....:-------.........x.x.:::..-.x..:...:.:x.:.xx.x.:x...... 49M6D43M1I8M7I18M1I28M 96/146 65.8% 155/94230402 0.0% 15/146 10.3% 120867445 69347110 +3814 chr4 + 190214555 182832246 182832245 182832367 122 CCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCTTCCTTCTCCC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCCTTC .:.x.:.::.xx.:...:..:.:.::.......:...:..:......x:x:x.x.::.x..:......:.....x.x.x:x:x.::x...::x.x.:..:x..x........:..:..:::. 122M 72/122 59.0% 122/94230402 0.0% 0/122 0.0% 90657418 NA +3351 chr4 + 190214555 182832271 182832270 182832413 143 CTCTCCCCT----CCTTCTCCTCTCCCCCC----TTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCTTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCTTCCT-TCTCCTCTCCCCTCCTTCTG chr4 - 94230402 83016315 83016314 83016466 11213937 11213936 11214088 152 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTCAGCCACCAGCCCCATCTGCTGCCCCAGCCTTGTG ....:..:.----:..x..:.x...:.:x.----:..x:......:...:....x....:..:::::.:.x.:...:.x...x:...:..:.x...xx:.:..:x.....:.:...::xx:.x..xx:..:-...x..x:...xx....x.. 9M4I17M4I97M1I20M 88/143 61.5% 152/94230402 0.0% 9/143 6.3% 99815956 90398599 +3450 chr4 + 190214555 182832275 182832274 182832394 120 CCCCTCCTTCTCCTCTCCCCCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCTTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCTTCCTT chr4 - 94230402 83016315 83016314 83016430 11213973 11213972 11214088 116 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCAT----CTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTT .:.:.....xxx....x.::.x:....:x.xx:x...x.----......:...:....x....:...::::.:.x.:...:.x...x:...::.:.x.:.xx:.:..:x.......:... 39M4D77M 72/116 62.1% 116/94230402 0.0% 4/116 3.4% 99815960 90398595 +3431 chr4 + 190214555 182832306 182832305 182832410 105 CCCCTCCTT---CTCCTCTCCCCTCCTT--------CTCCTCTCCCTTCCTTCTCCTCTCCCTTCCTTCTCCCCTCCCCTCCTTCTCCTCTCCCTTCCTTCTCCTCTCCCCTCCTT chr4 - 94230402 83016315 83016314 83016430 11213973 11213972 11214088 116 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTT .:.:.....---...:x..:.x...::.--------.x:......::..:....x....:...::::.:.x.....:.x...x:...:..:.x...xx:.:..:x.....:.:... 9M3I16M8I80M 69/105 65.7% 116/94230402 0.0% 11/105 10.5% 99815991 90398564 +3303 chr4 + 190214555 182833105 182833104 182833188 84 CTTCTCCTCTCCCCTCCTCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCC--TTCTCCTCTCCCCTCCTCCTTCTCC chr4 - 94230402 85651755 85651754 85651840 8578563 8578562 8578648 86 CTTCTCCTCCCCCCTGCTCTGTTCTGTAGTTCACCTCTCTTCCTCCCCCCCCCCCCTCCGTTCCTGCACTCCCTGTGGGCTTCTCC .........:.....x....x:.::x:xx:..x....:.:......:.:....:.....--.:..x.x.....:x:xxx....... 59M2I25M 58/84 69.0% 86/94230402 0.0% 2/84 2.4% 97181350 93033205 +4214 chr4 + 190214555 182833163 182833162 182833286 124 CTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTGGCCTCTCCCCCGCTCCTCCTCTCCCCTCCTCC chr4 - 94230402 92174828 92174827 92174949 2055454 2055453 2055575 122 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTC--TCCCTCCCCTCCTTC ...x:.:..:xx..:.....:.:.::.......:............:x:x:x:x..:.x::::.:.........x:x.x.x.x:.:x....x..x..:..x.:....--:.:..........:. 107M2D15M 78/122 63.9% 122/94230402 0.0% 2/122 1.6% 90658335 NA +3774 chr4 + 190214555 182833202 182833201 182833344 143 TTCTCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTGGCCTCTCCCCCGCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCC---CTCCCCTCC-TTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964791 61964790 61964934 32265469 32265468 32265612 144 TTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTT--TTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCG-GGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ...::...:......:..........:...:.--....:.::...x..x.x:.xx.x:..:..:x.:..x-xx......:....x:x......x.xx---....:....-.x....::x.x:.:.....:x.:.xx.x.:x...... 32M2D36M1D26M3I9M1I37M 93/140 66.4% 144/94230402 0.0% 7/140 5.0% 120868411 69346144 +3267 chr4 + 190214555 182833297 182833296 182833395 99 CCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCC-------CCTCCCCTCCTCCTCTCCCC---------TCCTCCTTCCCCTCTCCCCTCCTCCTTCTCCTCTCC chr4 - 94230402 92174832 92174831 92174946 2055457 2055456 2055571 115 CCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATGTGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCC ..:...xx:..::::...:.:::......:...:..:......-------::.:x:.........::..:---------..:x.....x.x..:..x..x...:::....:.... 43M7I20M9I36M 65/99 65.7% 115/94230402 0.0% 16/99 16.2% 90658465 NA +3201 chr4 + 190214555 182833307 182833306 182833390 84 CTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCCC--CTCTCCCCTCCTCCTTCTCC chr4 - 94230402 85651755 85651754 85651840 8578563 8578562 8578648 86 CTTCTCCTCCCCCCTGCTCTGTTCTGTAGTTCACCTCTCTTCCTCCCCCCCCCCCCTCCGTTCCTGCACTCCCTGTGGGCTTCTCC .........:.....x.:..x:.::x:xx:..x....:.:......:.:....:.....x.:..--.x.....:x:xxx....... 64M2I20M 57/84 67.9% 86/94230402 0.0% 2/84 2.4% 97181552 93033003 +3470 chr4 + 190214555 182833333 182833332 182833454 122 CCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCCCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCC----TCTCCCCTCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 34762343 34762342 34762468 59467935 59467934 59468060 126 CCTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTCTTTACTTTGCTGAATCCTCC ....::....x..::.x..:.x::x.:x...xx:..x.:..::.x..:...::..........:...:..x.......:xxx::.::.x....----....::...:.:x:.:.x..xxx:..... 93M4I29M 74/122 60.7% 126/94230402 0.0% 4/122 3.3% 148070990 42143565 +4132 chr4 + 190214555 182833359 182833358 182833543 185 CTCCTCCTTCCCCTCTCC---CCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCC--------CCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCC---CTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964742 61964741 61964934 32265469 32265468 32265661 193 CTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTT--TTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCAT----GCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC .....::...:.:x:.:.---:.xx..x..xx:.:x:.:.:..x:.x:..::.:...:......:..........:...:.--....:.::...x..x.--------:.......:..xxx.:..:......x:x......x.xx---....:....x.----x.....:x.x:.:.....:x.:.xx.x.:x...... 18M3I60M2D16M8I38M3I11M4D36M 115/179 64.2% 193/94230402 0.0% 20/179 11.2% 120868617 69345938 +3335 chr4 + 190214555 182833492 182833491 182833613 122 CCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCC chr4 - 94230402 92174828 92174827 92174946 2055457 2055456 2055575 119 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATG---TGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCC .:.x..:...xx.:..:::..::.:::......:...:..:......x:x---:x:x.::.x..:.........:..x:x.x:x:x..:x.....x.x..:..x..x...:::....:.... 50M3D69M 71/119 59.7% 119/94230402 0.0% 3/119 2.5% 90658664 NA +3461 chr4 + 190214555 182833532 182833531 182833653 122 CCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCC----TCTCCCCTCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 34762343 34762342 34762468 59467935 59467934 59468060 126 CCTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTCTTTACTTTGCTGAATCCTCC ....::....x..::.x..:.x::x.:x...xx:..x.:..::.x..:...::..........:...:..x.......:xxx::.::.x....----....::...:.:x:.:.x..xxx:..... 93M4I29M 74/122 60.7% 126/94230402 0.0% 4/122 3.3% 148071189 42143366 +4254 chr4 + 190214555 182833558 182833557 182833742 185 CTCCTCCTTCTCCTCTCC---CCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCC--------CCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCC---CTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964742 61964741 61964934 32265469 32265468 32265661 193 CTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTT--TTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCAT----GCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC .....::.....:x:.:.---:.xx..x..xx:.:x:.:.:..x:.x:..::.:...:......:..........:...:.--....:.::...x..x.--------:.......:..xxx.:..:......x:x......x.xx---....:....x.----x.....:x.x:.:.....:x.:.xx.x.:x...... 18M3I60M2D16M8I38M3I11M4D36M 116/179 64.8% 193/94230402 0.0% 20/179 11.2% 120868816 69345739 +9022 chr4 + 190214555 182833567 182833566 182833834 268 CTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTC-TCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCC-CCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCC---TCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCTCCCC chr4 - 94230402 92729432 92729431 92729702 1500701 1500700 1500971 271 CTTCTTTTCCCCCTTCGTTCCCTCCTGTTTTTTCCCTTCTTTCCCAGTTTTCTTtttcttttccct--tcctcttcctttcccccttctttctccattttcttttttccccttcctctcctcccccccccttttttcctcttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCC ..:..:.:...:.:..x...:.::..x:::.:::......:::.:xx::.:...:.:..:.:....--....::....:.....:::.:.:..:.-.::...::::......:.:.......:....:..::.::.:...:...x::::.x::.:.::..:..:.::.:...-::.:..:....::x:.......x.x::x.:..---.:..:...::....x:.::.:...:.::::..:..x.:...:...:..x..:....:....:... 66M2D27M1I76M1I32M3I65M 159/266 59.8% 271/94230402 0.0% 7/266 2.6% 90104135 NA +3335 chr4 + 190214555 182833691 182833690 182833812 122 CCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCC chr4 - 94230402 92174828 92174827 92174946 2055457 2055456 2055575 119 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATG---TGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCC .:.x..:...xx.:..:::..::.:::......:...:..:......x:x---:x:x.::.x..:.........:..x:x.x:x:x..:x.....x.x..:..x..x...:::....:.... 50M3D69M 71/119 59.7% 119/94230402 0.0% 3/119 2.5% 90658863 NA +3498 chr4 + 190214555 182833731 182833730 182833857 127 CCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCT chr4 - 94230402 34762343 34762342 34762469 59467934 59467933 59468060 127 CCTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTCTTTACTTTGCTGAATCCTCCT ....::....x..::.x..:.x::x.:x...xx:..x.:..::.x..:...::..........:...:..x.......:xxx::.::.x.:::.x:x....::...:.:x:.:.x..xxx:...... 127M 73/127 57.5% 127/94230402 0.0% 0/127 0.0% 148071388 42143167 +3093 chr4 + 190214555 182833790 182833789 182833883 94 CTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCT-----------CTCCCCTCCTCCTTCTC chr4 - 94230402 34762344 34762343 34762448 59467955 59467954 59468059 105 CTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTC ....:.:.:x...:.x:..:x.:x..x.::xx:..x.:..::.x..:...::..........:...:..x.......-----------.....x.x:::...... 77M11I17M 61/94 64.9% 105/94230402 0.0% 11/94 11.7% 148071446 42143109 +3282 chr4 + 190214555 182834122 182834121 182834228 107 CTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCC------TCTCCCCTCCTCCTTCTCCTCTCCCCTCCTT chr4 - 94230402 34762344 34762343 34762456 59467947 59467946 59468059 113 CTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTCTTTACTTT ...::....x..::.x..:.x::x.:x...xx:..x.:..::.x..:...::..........:...:..x......------.:.::x....:x:x....:....:::x.:.. 76M6I31M 66/107 61.7% 113/94230402 0.0% 6/107 5.6% 148071778 42142777 +4254 chr4 + 190214555 182834166 182834165 182834350 185 CTCCTCCTTCTCCTCTCC---CCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCC--------CCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCC---CTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCC chr4 - 94230402 61964742 61964741 61964934 32265469 32265468 32265661 193 CTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTT--TTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCAT----GCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC .....::.....:x:.:.---:.xx..x..xx:.:x:.:.:..x:.x:..::.:...:......:..........:...:.--....:.::...x..x.--------:.......:..xxx.:..:......x:x......x.xx---....:....x.----x.....:x.x:.:.....:x.:.xx.x.:x...... 18M3I60M2D16M8I38M3I11M4D36M 116/179 64.8% 193/94230402 0.0% 20/179 11.2% 120869424 69345131 +8762 chr4 + 190214555 182834210 182834209 182834480 271 CTTCTCCTCTCCCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCC---------CTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCT-CTCCCCTCCTCCTTCTCC---TCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCCTTCTCCTCTCCCC chr4 - 94230402 92729432 92729431 92729702 1500701 1500700 1500971 271 CTTCTTTTCCCCCTTCGTTC--------CCTCCTGTTTTTTCCCTTCTTTCCCAGTTTTCTTtt-tcttttcccttcctcttcctttcccc----cttctttctccattttcttttttccccttcctctcctcccccccccttttttcctcttctatttccattttctttcttttttttttccattttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCCC .....::..:...:..x...--------......x:..:.:.:..:.::....xx::....::.-..:::....:....::....:.....----..:...:::.:x.:::..::::......:.:.......:....:..::.::......:.:---------:..:.:...:.::.:.:..x.::......:::.-:.......x.x::x.:..---.:..:...::....x:.::.:...:.::::..:..x.:...:...:..x..:....:....:... 20M8D36M1D26M4D60M9I33M1I18M3I65M 165/258 64.0% 271/94230402 0.0% 26/258 10.1% 90104778 NA +3335 chr4 + 190214555 182834299 182834298 182834420 122 CCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCCCTCCTTCTCCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCC chr4 - 94230402 92174828 92174827 92174946 2055457 2055456 2055575 119 CTTGCCTTCCAGCCCCCTCCCTTTTTTCTCCCCCCCTCCTTCTCTCCATG---TGTATTTTGTCTCCTCCTCCTCCTGTGCGTGTGTCTGCCTTCGCATCCCCGCTGCTCTCCCTCCCCTCC .:.x..:...xx.:..:::..::.:::......:...:..:......x:x---:x:x.::.x..:.........:..x:x.x:x:x..:x.....x.x..:..x..x...:::....:.... 50M3D69M 71/119 59.7% 119/94230402 0.0% 3/119 2.5% 90659471 NA +3381 chr4 + 190214555 182834339 182834338 182834454 116 CCTCTCCCCTCCCCTCCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCT-----------CTCCCCTCCTCCTTCTCCTCTCCCCTCCTCCTTCTCCT chr4 - 94230402 34762343 34762342 34762469 59467934 59467933 59468060 127 CCTCCTCCCTGCCTCCATCTTGCTGCTGCCTAACTCACTTCCTCACTTCTCTCTCTCCTCTCCTCTCTTCATTCTCCTTGAGTTTTTTGCTCCCATGTCTCTTCTCTTTACTTTGCTGAATCCTCCT ....::....x..::.x..:.x::x.:x...xx:..x.:..::.x..:...::..........:...:..x.......-----------.....x.x:::......:.:x.:::x.:xxx.:..... 78M11I38M 72/116 62.1% 127/94230402 0.0% 11/116 9.5% 148071996 42142559 +3331 chr4 + 190214555 182847387 182847386 182847480 94 AAAAAAAAGAAAGAAAGAAAGAAAAAAGAAAGAAAGAAAAAGAAAGAAAGGAAGAAATTGGTGGTGTTGGAGACACTTGGTGGCCTAGAAGCAA chr4 - 94230402 31023813 31023812 31023906 63206497 63206496 63206590 94 AAAGAAAACAAGGAGAGAAGGAAAAAAAAAATCAACAAAAAAAACCAAAGCTAAACAACAGTGGGGTTGGGGGGAAGTGATTTCCTTTAAACAA ...:....x..:..:....:.......:...xx..x.....:..xx....xx.:.x.x::....x.....:.:x.xx..:.xx...xx..:... 94M 63/94 67.0% 94/94230402 0.0% 0/94 0.0% 151823574 38390981 +5733 chr4 + 190214555 182853852 182853851 182854075 224 TAGTCTTTGACAGGTAGGAAATTTGCATTTCCATTAGTGAGGCCTTTGTCAATTGTGAGTTATAAAAGCCCCAGAAGAATAGGGTTGG--GGGAAATGCATTGTATT--TTAAAAG-------------GAGACTTTATTGCATGGTTCAACGAAAGGTACCGAAGTAGATAAAGCCTCTGGAGCGGGC-----TGCTGAGAAGCCTCACAACGAGGAGAAACTTGTTAATGCACGTGCCTGTCAC chr4 - 94230402 52787712 52787711 52787956 41442447 41442446 41442691 245 TACTCTGTGACAGGTAGAAAATTTGCATTTCCATTAGCGAGGCCTTTGTCAGATGAAATCCCTAAAGGCAAT-GAAGAATGCGTGTGGAAGGAAAATGCAATGTATTAATTTACATCCACCCACCCCCCAAAAATTCCCTGTATAGTTCAGTGAAATGTAACTCAAGATAAAAGGCAGAGGGAAAAGATTTACATTCTGGAGAGCCATACAATAAAGGAATAGTGATTTGTGCATGCTTTTGCCAC ..x...x..........:...................:.............:x..x:.x::x....:..xx:-.......:x.xx...--..:.......x......--..x.x.x-------------:.:.x..:x:..:..:.....::....x...x.xx.:x.x.x..:..xxxx...:x:.::-----.x...:::....x:....::.:.::.x.x.x:..x:....:.:x::..:... 72M1D15M2I17M2I7M13I60M5I52M 147/223 65.9% 245/94230402 0.0% 23/223 10.3% 130066140 60148415 +37040 chr4 + 190214555 182874342 182874341 182875025 684 CCCTCATTATACTTGTATAATACAGTATGGTTTCTATCG---------CGTATTTCCTTCC---------TGTTTTTAC----------ACTTATTCTTGCTTCACTGACTTTATTATCGGCAGAATTTTGCAGCATTT-----------------------TTTTTACACAGCCATAAATACTCTTCAATTCAACAAATGCATACAAATGGTTTCCATTAGAATTTTAATCTACTCTCAAAATGAAAGAAAAGCTTAATATAAATCTTTTTAAATTACCAGAACATAAATTCACACAGGGACAGTTCCTCCTAGGCCACGCACAAGGGGTCGCATCCTGCCGTCCTCCCTCAGAAATTAATTGAGCTCTCTTGCCGCCGTAAACGAACAGTGCATCTGG--AAAGATCGTATCTGTCAAGATTGCAGATTGGTTTCCCTCAGACTTTGTAAAAGTCACAGCTTACAATACGTTCATTATACCGATGAGAATGGCTGTCCTCCCAACTGGAAAGAAATAGGTGTTTTGTTCTGTTGGACCAAGATTTACAGAAAGCAATTTTCCTCCATGCAGGAGATATGACAAACCTGCTGGAAAAAAATGTCATTTCACAACTTCTTTCATTTCATCACCTTTTTTTACTGCTAGATGTAGATTCTCTCCCC------TGTGCGAACGGGCTGTAGTGACATTTAATGGCTAAGTGAGG-GAGTCACCAATGAGTGGAGGCACCTTTCTGA chr4 - 94230402 52789641 52789640 52790372 41440031 41440030 41440762 732 CTTTCATCATGTTTTTATAAAACAGTAGGTTTTCTACAGGCTCTACTAAATATTTCTTTCTGGTTTAGGTTGTTTCTGCCTCCATACTTACTTATTCCTGCCTCACTAACTTCATTGCTAGCAAAGTTTTTCAGTGTTTCTTCCGTTTTTTCCCCTTTCTCCTTTTCATACAGCAATAAATATTATTCAATTCAACAAATGCATACAAATGGTTTCCATTAGAATTTTAATCTACTCTCAAAATGAAAGAAAAGCTTTGTATAAATCTTTTTAAATTACCTGAACATAAATTCAGACAGGGACATCTCCACCTAGGCTGAGCTGGGGAGTTCACAGCCTGCTGTCCTCACTCATAAATTAATTGAGGTCTCTAGCTGCTGTAAATGAACAGTGCATCCTGCAAAAGATCATATCTGTCAAGATTGCAGATTGGTTTCTATCAGAGTTTGAAAAAGTCAGAGCTCACAGTGCTTCCATTATGTCTATGAGTATGGCT----TCCCAACTGGAAAGAAATGTGTGTTTTGTTCTGTTGGGCCAAGATTTACAGAAAGCAATTTTCCTCCACGCTCCAGCTATGACAAACCTACTG---AAAAATGTCATTTCATGACTTCTTTCATTCAGTCACC--TTTTTACTGACAAATATATATTCTTTCTGCTCAATGTATACGCACCAACT---GTGACATTTAATGGCCAAGAAAGGTTAATCACAGGTGAGTATATATCCCTCTTGGA .::....:..::..x.....x......x.x......:x.---------x:......:...:---------.....:.:.----------........:...:.....:....:...::::...:.:....x...::...-----------------------....:.:.....x.......:.x........................................................................x:.....................x.............x.........x:...x.......::x..xx::.:.x..:..x.....:......x....x............x.....x..:..:.....:............:x.--.......:...........................:x.....x....x........x....:...:.:.x.:......::.x.....x......----..................:x.................:..............................:..xxx..x............:...---...............::............:x:.....--.........x:.:..:..x.....:..:x.------.:.:..x..x::..---...............:...x:...-x.:....x::.....:x.x::x...:.:x.. 39M9I13M9I9M10I50M23I238M2I94M4D93M3D37M2D30M6I14M3D24M1I31M 549/672 81.7% 732/94230402 0.0% 72/672 10.7% 130084701 60129854 +3276 chr4 + 190214555 182876947 182876946 182876993 47 AGAAAACAAAAAAACAAAACAAAACAAAAACAACCACACACATAATA chr4 - 94230402 25002888 25002887 25002934 69227469 69227468 69227515 47 AAAAAACAAACAAACAAAACAAAACAAAAAAACCCACACATAAAATA .:........x...................x.x.......:.x.... 47M 41/47 87.2% 47/94230402 0.0% 0/47 0.0% 157874059 32340496 +3065 chr4 + 190214555 182882968 182882967 182883057 90 AGAGAGACAGAGAA---AAAAAAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAGACAGACAGACAGACAGACAGACAGACAGAAAGAAAGAAAG chr4 - 94230402 61868427 61868426 61868519 32361884 32361883 32361976 93 AAAGAGTAAAAGAATCAAAGAAGATAAAGAGAAATGGTAGAAAATGGGGAAAGAGAGACAGACAGCCAGATGTACAATCACAGCAAAGTAAAG .:....xx.:....---..:..:.x.....:...x:.x.::...x:::......x..........x....::x...:x..x.:x:..:x.... 14M3I76M 60/90 66.7% 93/94230402 0.0% 3/90 3.3% 121014541 69200014 +29077 chr4 + 190214555 182889992 182889991 182892166 2175 CTTTGAGCATTAAAACATATGTA----ATATGCTTCGGAGACAATACAGAAAGGACAGGAGCA---GAAAATTAAGCATATAATTATAATAACATAAAAATGTACATGCTTTGGTAGGGTAGATTTTAATAAGATTTTAATAATATTGGTAAGGAGCCAAATTACAGAATACCCTAGAATGTGGAATACAAAATCTCAGAGACAAAATAAAAACTCATGAAAATATAAGAGCACTTTAAAAAGGTAATAATCTTTAGGATAAAGAAAGCCTTTTCTCAACACAGGTACTGAGCATGTTTAAT----AAAAATTAAATGAGATTAAAGAGAAGGGGCACAGCCACACGCTCCCCG-CCCCGCGGTGA--TTAGGAAGG-------------TGATGCTTGTGTAGGTGAAAGCATGGAGCCAGGGCACAGAAG--AGCTCCGAACACCAACAGTGCTGCA---GTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGTTGGCATGCGGAGGAGGGGC-------AACACATCCATGTTGGGGACCCCTCCCATCCACAGCCCCAGCTGCCACCACGGCAGGGCATGGGCTTTGGGGGCAACAAGGAGAGACAGGCTGT-CTCCTCTAGGAACAACTCATT--ATTCAG----CTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACCCAAATTGAGC------------CAAAACAACAGGCGTCCCCACC-CCCCAGAGGGATAATGTGCCACCACCCTGTGTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGG--ACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATGCTACTGTCAT------TTGAGGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCATTAAGAACACAACCACAATTA-----TTTATTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTG-----CCGGATCGCAGCAGATGACAGACAGCTGATGCTCCTCTGAAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTA-------------TTTTAAACC--------CTAAAGCAATAG----TTCAAACACATGTAGATTCCATGTGACAAGAGAGACAGTAAGGAAGATTTGAGGCTTTATATTCTTTAGATGCCTACTTTTGCCATACTGGCTAGTAAGAAGTTATGTGTAACTTCAAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGATTGAATGAGATGTAACTCACTGAAGCTTTTGACTCGGTCTGCTGTTAATTGAATCAAAGTCAATGACAATCTTGCTGCACTTCGGTATGAATTTCCTAAAAATAAAAACAAAATACAATTATTATCTGGTGAGTAGTGAAAGCAATTTGTTTACTTTGGCTTAACTCATATTTTCTGTGCAGAGAAAAATATGTCCTGGGATTCACTTGCTATTTTCTCTCTATAGGAGCCAATTATAGTGCACCATACCAAGAGAAACACAGAGCAGAAAAGACTAAGACAAAAAAAGATGCATGGGGTGGTGTGGTTTGTATGTT-TTCAGCTCTCTGAGTTCACGAATTATTGGGGAGTCAAAGGATTTCTAACAAGTCAGCTGCACAACATGATATCCGATTACTAG---------TTTTCCCATCAGATTTATC--TTATTTTCTAGAAAAATTTCTGCA-----------GCCAACTTG---GAGTCTCTCTA----ATGCAAAAAAATA-GTAAATTTTCTTTTGC-------------CGCTTATATATAGCAAAAAACGACTACCTT--------TAGTGAGGAGTAATTTTT---------------CAAATTACATTCTAAAAA--TGCAAACATAAACCA-ACTTTTTTTTTTTTTTTTTTGCTCA-----------------------------------------------------------------------TTAACTTT---------------------TCAC---TTGTTCC---------TCATT------TCTTCTACAACAATTAA-AAAGAAGACATTTGGGAACAAAACAAATTCTTTTAAG--AATCACTGAACAAGAGAGTATACAAATAATTTGAATTTAAAGTCTCAGAAGGCACCACGGTTGAGTTCATGAGATACACTGAG------CTGTATCCCTAATGACCAGCACAAG chr4 - 94230402 52799906 52799905 52802198 41428205 41428204 41430497 2293 CTTTATGTAATATCACAAATGCACAAAATATGCTTTGCATATGATTGCCAAAG--CAGCAGCACTCTGGAACCAAGCGCGTGGCT-TAAAATTATAATAAGGAGTCTACTTCAATGTAGTAGATTTTAATAAGACTTTAATAATACTGGTATGAAGCCAAATTACATAATGTCCCAAAATATGAAACA-AAGCTTTTTCAGAGAAAATAAAAGCTCACTGAAGTATAACCACATTTTAGAAGGAAAAGAA----------AAAAAAA---TTATCTAAACAAAGCCACTAGGCGTATTTAATTTTAAAAAATCAAAT-----TAGAGAAAAGGAACACAAA-ATATATTCCCAGATCTCAAAATAAAATTAAAAAGGATATTATTTTAGGCAACATTTATGAAAATGGAAGTACTACGCCAGCACTGGGAAACAAGCT---AACACCATAATTACCTCTTTTGGAACAGATGTGGATATGGGTTGAGTATCTCCAATTTCTCTCAAAGGACAAAAAATGATTGAGTTACC--TTACAGGTTAATTTTAAGACTGAACTATTTTGGATCGTCTAGAATGAACTTAGACCAATAAACTAATTT--------CCTTCCATACATGAAAACCAATTCCA---------AATAGGAGTCCCAAAGGTA----GGAGAGAAATGATTTACTCCTCC-----TAACCCCTTCAATTCTGGAGTCTTGGTAAAAACAAAGAGT--CGAAAGGTCTCTAAAGCTTGCTCCAGCATCGACCATTCTCAGAACAACTTCCTCTCTCACCACTCCACAAGTATAA-------------------CAGTGTTAGATAGCGATTAATAGAAAAAT--------------CAACTTCCTTTTGTTGGGTAACACATGTAAAATACCATATA---------------------------CACTTTAATCTGTATAACCTTTTAAAATACTAGTGTTATGCAAGTTAGAAGATTAGTATTTGT--ATGGATAACATACTTTGTTATTTATTAGGATCAACTATTTAGATCCACACATC---------CAATAGAGAGATCAACATATATTAGCATATTTGAATGTACCTCTGG------TTACACT-AAGAACTGCTGTTTAGCTGAGTCTAAATCAATG-CTGACAGCCTAT---------CAGAGCACGTGGTGATGAATGCAGCAAGAACC--AGAA------------------CAGTTTTCTGTACATGCATTACATTGTCTCATCTACATGTCTCTAGACTTTTAAAGCAGATTTGATAAAGGCATTAAAAATTTTAAGTTGATTTAGATTCCACATGACAAGATGTAGTGAGGGGAACGTTTTATGCCTTACATTTCTTAGAAGTCTACTTTAGCTATAGAAGCCATTAAAAAGTTGCAAGTAACTTCAAGATGAAAGGCATTTGCAGCTTTTTAGAGAAGGATAATCACAGTCTTCTAGAGATATAATGGGACTTAATTCACAGAAGTTTTTGACTTGGTCTGCTGTTAATTGAATTAAAGTCGATGATGATCTTGTTACATTTTGGCTTGAATTCCCT-AAAATAAAGA-AAAATACAGATATTAGTTAGTGAGTAGTTAAAACATTTTGCTTGCTGTAGCTCCAGCTACATTTT---TGAAGGAAAAAACCC-TCCTTGGGTTCACATAGT-TTTCATCTCTGTGGGAGCCAATTATAGTGCACCACACTGCGAGAAAC-CTGGCCAAGAAAGACTAAGAC-AAAAAAGACACATGGGGTGGGTCAGCCCGTACATTCTTCGGCTATTGGAGTTCATAAATTACCCAGGAGTCAAAGAAGTTTTAACAACTTAGCTGCAGGTGGTAGCATCATGTTACCAGGGCTGGGATTTTCTTTTTCAAATATTTCAAATATTTtatacatacatgtatgtatatacatacacacatacatgcatgcatatgtatacagcatatgaaaaaatatatatatttatatatgcataggtatatgtatatttatatataAAATATCTGAAATATATTTTGACAAATATTGTGATGGCATTTTTTCCCCACCACGTCTACAAAGAACATTTTCAAACTTTGCCTCTGTGTACTATAGTATTTTATTTTATTTTTTGCTAAGGGAATAGATCACGTTATGTACTGTACTGGGGAAAAAAACAAACTAGTTAAGAGGGAATAATTTAAAAATTGTAACTTTAAAACTAGAAAATTAATACAGCCACAAATTGTTTCCTTTTATTATCATTAGAGCATCTGCTACAGCAATTAGCAAGGAAGGTATTTGGGGACTGAGCGTATATTTTACAGTCTACCAGTAAACAAAGGATTATGCAAATAGTGTGGATTTAGTGCCTAATTAAGCTCTGCAATTCAGTTCAAGAGATTCATTAAATACCACCTACATCTTTAATAATCAATACAAG ....:x.:.x..xx...x...:.----........:.x.x.::..xxxx....--...x....---x::..::....:::.:::.-...x.x:....x..x.x::x.:...:::.:x:................:..........:.....x.:............x...::..:.:...:..:..:.-..:x.:.:xx...x.........:....:x:..:.....xx:..:....:..:.:x..x..----------...:...---..x...x....x..x:...::..:.:......----......:....-----..:...:....::....:x-.:.:::....x.-:.:.:x::.:.--...::....-------------::.:::..:..x.::..:...:.:x:x.....x:.xx:...:--....---.......xx.x.:.:x.x---.x..xxx:.x.xx.::.....x..:.x....xx.x.:.x....x:...:.::..x.:...xxx.:x..--..:...:xx::::..:x:xx......::x....xx:.:xx..:.x.::.-------..:.x.::x..x.--------...:....x..:::xxx.x:x.x...---------:::.x.:.:::::::..:.----.......x.x.x.x.-......:-----:...:.x..--....x.----..x::::...xx:.....:--.:x:x.::.xx:...x.:x:x.:x...------------..:......xxx.x::.:....-.:...x.:.x....-------------------.....xx...xx:x..x.::x:....x..--------------..x::::.x.:...::..--...x....:xx.:x.:..x.x---------------------------.x..:x.x....:.xx.xx:x:.xx...:...x...:..------.x..:.x:..:.x..:x.--.x..::.x:...:x:::.xx..:.:.x..::..:x.:..:.....x:::::..---------.x..x:...:xx....xxxx....-----...:xx...x.:..::.------.x:..x.-....:xx....-----.:.::..xx.::x:...-.x......:x..---------x.....xxx::.::x:xx.xx....x..:..x--....------------------:..:::.x..:..xx.xx:xx..:x.x...x:...-------------.......x.--------:x..:...x..:----..:..::xx..x.........::........x:x.xx.x::....x:...x.x..:...:...::.....x.:.......x..:...xx:..:.x...:.....:::x.......................x...:.:.:.....::.x.......x..:......:.....xx....:..:x...:....x....:........:...................:......:....::......:.:..:..:..:x......:...-........:.-........:x.....x:.:.........x...:..x....:..:..x.:...:x.x::.:.....---..x..::.....:x:-....x..:.....x.:x.-...:x.....:.:.....................:..::x.......-.x.:x..::............-........::..........xx::.:::...::..-...:...x.:x.......::.....::x:..........:.x..:......x.:.......x:xx:.:::...xx:....:..---------...::::x...:..x.x..--x......x..x.x.x..x.x..:.-----------:.xx..x..---.x:.x.x.x..----..:::........-:..x....x:x.x...-------------:::.........:x.x.xxxx:.x..:x..--------..x..x.:x.xx......---------------....xx.....:.x...x--...xxx::.:x..:.-.x.x....x....x.........x.-----------------------------------------------------------------------x.......---------------------:...---.....:.---------.....------...x.....:......:-..:....::.......:..x:.:.:x..x:...xx..--x.:..x.:.....::..x...:......:.x..:.....:x.:..x.xx.:..x.::.::..x......x.....x..:.:.:------..::...::....:.:..::..... 23M4I26M2D8M3I19M1D102M1D61M10D7M3D32M4I11M5D19M1D12M1I11M2I9M13I42M2I4M3D18M3I68M2D49M7I13M8D26M9D19M4D15M1I7M5D9M2I6M4I19M2D27M12I22M1I14M19D29M14D18M2I21M27D39M6I18M2D53M9D24M5I17M6D7M1D11M5I17M1D12M9D32M2D4M18D35M13I9M8I12M4I268M1D10M1D65M3D15M1D18M1D47M1D21M1D35M1I83M9I19M2I24M11I9M3I11M4I13M1I16M13I30M8I18M15I18M2I15M1I25M71I8M21I4M3I7M9I5M6I17M1I37M2I83M6I25M 1297/2002 64.8% 2293/94230402 0.0% 464/2002 23.2% 130090086 60124469 +38275 chr4 + 190214555 182893959 182893958 182895078 1120 AAAAAGGCGAAATATTCAGAATA------------CAATGGTGTAGATTTATGGGAACCGTAAAATAAGAAAACCTGAAGGTAGTGCCATTTGGGTCTTATGACATTTATATGCCAAGGTATGTTGAGATCCTCAAATATCTACCATGTATTAGATACAAATTAAAATTTCATATACAGACTCCCAGCTGACCTTGTTTC-TGACAGAAGTTCATTTCTTCCCTCCCCCAAATCTATGCACAATATGTCAGAGAACAGTAAA-TTGACAGTAATTATATGCAATGCCTGTGTTGTTTTTTGGCAGCTTGCAGTTTAAGAAGTTGCAAAC-TAAATTAAAAACATGCTAAGAATCACAGAGGATGCAATTAGTCTTAGAATA-CCTGGCACCATTCA-------AAAACAAAACACGGGAAA----------------TATCTTGCAAAGCTGATAGTGCAATTAATTTAGATCTAAACAATAGCAATTTAAGATCAAACACATCAGCAATGAGCTACTGACGAGCAGGCAGCAATGCAAATGTGACAAAT--GGAAAGACCCGGTTCCTACCTGCCTGGATGATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGGCATTCAGCTCCGCATGGCACACTGTGGGTTGAAAGGGAAAGAAAGAAAAACTTTGGTTGCAGCTCATGA-AGAATTTACTA------------------AGTGTTAACACATTCCATTCCCCCCTCTG-AAATAACAT------------ATAACAGACTCAAGTAAAAACATTGATTAGAAATGGCAAGTCCTAAGAATACCAAATGAGGCCCACGTGGTCTGGCT-GGTTGCTGATGAGCAGTGAGGCC------------------------TGAAGGCACCTAGAGCGGCCAGGACGGCC--------GAGGTCAAGTGCCTTC-CCCACCCTAAGCGCAGCTCCGCTTCACGGCTCCACAAGACCCTGGGGCATGAAAGTGCCCACCTGAGCTGGCTCATTGGTGTGCTGACACGCACACATGGGGAAGTTCACCGTGGCTGTTAAGAG--GGCTAGGGGATTTTAAGAGCAAGAGAATCAACAAGTGACGAAGCTGAGCGTGTCCATCCTGAGG------GATCTGCTT--TACCACATCGTG-----CTCAGCCCACATACGCACAAG chr4 - 94230402 52804432 52804431 52805638 41424765 41424764 41425971 1207 AAAAAGGCAACACATTTAGGCCAGCACACTATCTGCAGTGGCACAGATTTATAGCAATTGTAATAAAAGACATAATTAAAGTAGGATCATAGAAGTCTTATGACATTTATGAGCAAAGATATTTTAAAATCTTCAAATATCTACCATGCATCACGTTCAAATTAAAATTTCATGTATATACTCCCAACAGACCTTTTGTCATGGCAGAAGTTTATTTCTTTCTGCCCT--ACTCTATTCA--GTGTGTCAGAGCACAGTAAAATTGACAGTAATTATATGCAAAGCCTGTGTTGTTCTTTGGCAGCTCCTGGTCTAAGAAGTTACAAACCTAAATTAGAAGCACGCTTAGAATCACAGAAGATGCAATTAGCACTGGAAAAATTTGGCACCATTCAGATGCAAAAAACAAAACATGAAAAAAACAACCCACAAGTAGCATCTTATGAAGTTGACAGTGCAATTAATTTAGATCTAA-CAGCACCAATTTAACATCAAATACATCCATGAT-----ACCAGTGAGAAGGCAGCACTGTAACACTGACAAATCAGGCTGGCACTACTCCTTACCTGCCTGGATGATGAGCTTTGCACATTCATTACATGGAAATAAGGCAACATACATGCTGCATCCTTTCACGTCAGCTGAGTTTTTGTTCATGATGGCATTCAATTCAGCATGGCACACT---GATTGAAAAAAAAACAAAACAGAAC------AGCAATTCATAATATCATTCATTAAAATAAATCAGTCAAACTAAAATTAAAGTGTTACATCCTTTCAAAGGCAAATAGCTTGCACAGCTTGTCATAAAGGGCAGAGGAAGAAATA-AAAGCAGAAATACCAAGATC-----------AATGAAGGTCAATTGTTCTGACCAGGCTGCTGATTAGTAATGATATCATTAAGCACATTAGCATTGCCATTTGCTAACACCTATAGCAGGCAACAAAGCCTTAGGCTGTGGGCCAAGTAGTTGCAACCACCCTAAGTGAAGCAATATCTCACAGCTTCACAACTCTCTGGAGTATCTAATTGCCAGTATAAAACAGCTCATTTATGTGTTTACATGCACAGATAGGAACATTC-TTATGGTTATTAAGAGCACACTGCGCGCTCTTAAAGGCAGGAGAATCATGAAGT---AAAACTGAGCAGCTCTGTCCTCTGGGTCCCAGAACTGCTCAGTGCTGCTGCATGATTCTCTCACCCCAAGAATACACAAG ........:.x.:...:..:x:.------------..:...:::........:.x..::....x.x....x.xxx.x..:....x::...xx::................:x..x...:...x..:.:...:................:..:.x:.x................:..:.x.......:.x......x.x..-..:........:.......:.:x...:--.x.....x..--:.:........x........-....................x............:..........:x::..:.........:.....-.......:..:..:...x...........:...........:x:.:...x.-::............-------...........:.::...----------------:.....:::...:...:......................-..::.x........x......:.....x:::..-----..::::...x........x..:..xxx........--..xx:.xx.::x.:.:......................x..:...........x..:..:..............:..:..x........:..:.::..:......................::..x............---.:......:::...x...:x.:...------x...::....:.-.xx...:.:..------------------.:x:....x:::..x...:.:::.xxxx.-.....:.x.------------....x:.:.xx.:.x.:...:.-x:.x:......:x....x:.-----------.....:.x:..xx..x....:.:-..:.......x..:.:...x::.------------------------..xx::......x...:.x..:x.x:...--------x:..:.....:x:.x.-x..........:.x...xx::::....:...:.....xx.:....:.:..xx..x....x::x.:.:x::.......x:....:.x...:.....x..:..:.x:...-:::...:.:.......--x:..:x.x.x.:....::...:........xx....---:..:......:xx..::....xx..------..x.....:--.:.::.xx.:..-----....x....x:x.::...... 23M12I165M1I27M2D10M2D20M1I66M1I51M1I14M7I18M16I39M1D33M5D35M2I138M3D25M6D12M1I11M18I29M1I9M12I22M1D20M11D23M1I23M24I29M8I16M1I108M1D16M2I36M3D25M6I9M2I12M5I21M 788/1085 72.6% 1207/94230402 0.0% 157/1085 14.5% 130089527 60125028 +4113 chr4 + 190214555 182895136 182895135 182895223 88 ATCATATCTCACTGCAGCCTCGAGCTCCTGGGCTCAAGTGATCCTCCCAACTCAGCCTTCCAAGTAGCTGGGAGTACAGACGTGCCAC chr4 - 94230402 18197118 18197117 18197202 76033201 76033200 76033285 85 ATCATGTT---CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC .....:.:---..:.....:x:....:.....:.......x.:.x.xx::.........:...........:.x....x::.::.... 8M3D77M 62/85 72.9% 85/94230402 0.0% 3/85 3.5% 164698018 25516537 +3124 chr4 + 190214555 182908674 182908673 182908727 54 CTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAA chr4 - 94230402 49250037 49250036 49250090 44980313 44980312 44980366 54 CTTCATCCTATTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAA ..:::..::.xx.........:............:.x:.........:...:.. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 133658637 56555918 +3182 chr4 + 190214555 182908681 182908680 182908751 71 TCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAATAAAGAAGGAATATCCATTTGCAT chr4 - 94230402 49250047 49250046 49250117 44980286 44980285 44980356 71 TTAAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGGAAGGCCAAATGAACTACATTCCTTTATAT .:.........:..........:.:.x:.........:...:.:::x:...x:.:xx.:..:.x...::.. 71M 48/71 67.6% 71/94230402 0.0% 0/71 0.0% 133658634 56555921 +3083 chr4 + 190214555 182913983 182913982 182914023 41 TTTTTGTTTTGTTTTTTGTTTGTTTGTTTTTGTTTTGTTTT chr4 - 94230402 56587268 56587267 56587308 37643095 37643094 37643135 41 TTTTCAGTTTGTTTTTTGTTTGTTTGTTTTTACTTTGTTTT ....::x........................::........ 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 126326715 63887840 +9788 chr4 + 190214555 182914908 182914907 182915068 161 TAAAACTTGCCCTACCGTACGGGTATTTGGTGTCCAGCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTAGAAGGAA chr4 - 94230402 52814642 52814641 52814802 41415601 41415600 41415761 161 TACAAGTGGCCTTACCGTAAGGATACTTTGTGTCTAAGCTATGTGCCGCTGCTCTTGTCCAAGGTAGCACATCATCACTGCAGCCGTTAGGCATCCCATTGTACCCAATTCCAACAATCTTGTTTTCTGAATTTACAATACAGGCACCAACCTGAAAAAAA ..x..x.x...:.......x..:..:..x.....:.:x:...x:x.:....::...x.......:.:...:...........x..:..x....................:..:....................:..:..:.....:..:....::..::.. 161M 125/161 77.6% 161/94230402 0.0% 0/161 0.0% 130100266 60114289 +7396 chr4 + 190214555 182915457 182915456 182915565 109 TTACCTGGGAATTTGGATCTTTGCTTCTCTGTGCTGATAAGAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACT chr4 - 94230402 52816135 52816134 52816243 41414160 41414159 41414268 109 TTACCTGAGAACTTGGGTCCTTGCTTCTCTGTGCTGACAAAAACGCAACTGCCATAAAATACTCAGGCCATTCCAGATAATCCTCTCGTTTTTTACAGGATGCTTCATT .......:...:....:..:.................:..:..x..x..x..............x..........:...:..x..:.....:..:.....x:.....:. 109M 90/109 82.6% 109/94230402 0.0% 0/109 0.0% 130099322 60115233 +22221 chr4 + 190214555 182924817 182924816 182925540 724 TGGCTCGGCAGAAGCTAAACATTTT-TAAGAGCACAGTAAGAA-ATAGGCCAGAAAACATGAAAGCTTTATAGCTTTTTAGAAAACTTGATGGTCTTGCTGGTACAGCTCCCTATGATATGGTTCAGTTGTAATAGCAATGGAAAGTGTATCAGTGCAAGCTGCTGATGAAACATCAGAAAATGTAGCCAAGGGTCTTTTAAACACATTCAAGAACTGTTCTTTTGAACTGTGCCTCTTAGCCTTGGAAAACCTCTTCAAGATTTTAAACAGGGCCCCTGGATGAACTATAGAGTGAGAACCTGAAATTATCTTGTGCACTGGAATCAATATCAAGCAATATTTTCTCTTTGAGAGAAATTCAATCTGACAGAAGGGAGTAGGAGCAA--TAAGGAAACTGGGACCCTGGCTGAAATGCTTGCCTGAGAAACACGCGGCAAAGCAGTACAAATTAGGTGATGTCACTAAAGTCAGAAAACCATAGTGACAGAATAAAATGTTATCTGAGCTTCAGAATACTTCATTATCACTACCACAGGTCACTAAGCTTCACAAAATGCATCCATCAGCCTTGATAGCCATTTGGAGGC-CGCCGCTGGTAGCTAGATGGCGCAGCAGCGGAA--CACAGCCCCTCCACCTCAGGAGACCAGGGTGCAGCAGAGGCCTGGGC---GCACAGAGCAAAGTTTGTTAGTCTCAAAGTGCTCTCTAGTGGCCATATGAACATAAA chr4 - 94230402 52827523 52827522 52828224 41402179 41402178 41402880 702 TGTTTCCACAGAATAGGAATATTTTACACCAAAAAAATAAAAACATAGGCCAAAAATC-TAAGAATTTTAGGAGCTTTTTGAAAACTGTTTA--TTTGTTTGTGTA-TGCCTTGTGAAGAGCCTGA----------TAATTGGACTTGTAACAGT--------TTTTTAAAGGATTAGAGAATG-----GCGGGTTCTCTCTGGGCAATACCGTGTGGTTTATTTTATTTGTGGATTTT-GCATTAGAAAATC-CTTCAAGATTTTGAACAGCACTTC-AGATGATCTGCAGGACAAGAGCCTGAAATTAGCTAGCACAATGGAATCAATATCGAGCAATATTTTCTTTCTGCAAGAAATTCAGTCTGACAGAAAAGAGTAAAAGCAGCGTAAAGAAACCAAGACTCTGGCTAAAAAGCTGGGCACAGAAATTCCCTGTAAAGCAGTACAAATTAGTTGATGTCACCAGAGCAAGAAAACCATAGTGACAGAATAAAATGTTATCCAGGTTCCAGAATACTTTATTATCACCACCTTAGGTCACTAAGCTTCACAAGCTATATCCATCAAGTTTGATAGCAGTATATATACTCACAGCTGA-AGCTAGAAGGTGCAGTGCTTTAATGTACTAACGATTTACATTAAGACACCTGGGTTCAAAGTCAGTTTATGACAGGAACAGAAT-GGGTTTGTTGGTCTCAGCCTGCTCTCTAGTGGACAAATGTACATTAA ..x:..x:.....xxx:..:.....-:.xx.:x.x.:...:..-........:...x.-.:.:.::....x::x:....x.......xxx.:--:...:.x..::.-:x..:.:...x:x.x:.x.----------:...x.:.xx....x....--------:.xx.:..:x..:...:....-----:x....::.:.xx:x:..x.xxx.x::x...:x...x.x:....xx.:..-..x..:.....:.-............:.....x:.::.-:.....x..::..::::...:..........x..x.::..x.............:.............:.:..x:.........:..........::.....::....:--...:.....:::...:......:...x...x.x.xx.....:x.x.x.:.................x.........:.:..:x................................:::.:.:..........:........:...x:...................:x.::........:x:........x:.x.:x.x:.-.:.x....:-.......x..:....::x:xx..--:..x:x.xx.::..x.:.:..x...x....x..:x:xx:.::.:x.x---.x.....::-::.......:......:xx.............x..x...x....x.. 25M1I17M1I14M1D33M2D12M1D19M10D19M8D21M5D50M1D13M1D24M1D109M2I201M1I9M1D23M2I47M3I9M1D47M 478/692 69.1% 702/94230402 0.0% 42/692 6.1% 130097294 60117261 +3362 chr4 + 190214555 182930188 182930187 182930258 71 CTGCAACCTCCGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGTG chr4 - 94230402 18197126 18197125 18197196 76033207 76033206 76033277 71 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTG ..:..:..:xx:x..:.:.:.......:.x...x.xx.x........:..:.........:.:....x... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 164733062 25481493 +3043 chr4 + 190214555 182938853 182938852 182938922 70 ACAGGGTT-TCATTGTGTGTGTGTGTGCGTGTGTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTCTTTT chr4 - 94230402 15216065 15216064 15216135 79014268 79014267 79014338 71 ACTGGGTTGTTTTTTTGTGTGTGTGTGTGTGTGTTTTTCTTTTTTTCATTGGTAGCTTTATTTTCTATGTT ..x.....-.:x..x............:........:.:........x..xx.xx:...x....:.x.x.. 8M1I62M 53/70 75.7% 71/94230402 0.0% 1/70 1.4% 167722788 22491767 +3125 chr4 + 190214555 182938858 182938857 182938920 63 GTTTCATTGTGTGTGTGTGTGCGTGTGTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTTTTCTT chr4 - 94230402 15216073 15216072 15216135 79014268 79014267 79014330 63 GTTTTTTTGTGTGTGTGTGTGTGTGTTTTTCTTTTTTTCATTGGTAGCTTTATTTTCTATGTT ....:x...............:....x...........:x:.xx.xx....x....:.x.x.. 63M 48/63 76.2% 63/94230402 0.0% 0/63 0.0% 167722785 22491770 +3196 chr4 + 190214555 182938859 182938858 182938910 52 TTTCATTGTGTGTGTGTGTGCGTGTGTTTCTTTTTTTTTCTTTTTTCTTTTT chr4 - 94230402 56475249 56475248 56475300 37755103 37755102 37755154 52 TTTCATTTTGTGTGTGTGTGTGTGTTTTGTTTTGTTTTCCTTTTGCCTTCTT .......x............:....x..x:...x....:.....x:...:.. 52M 42/52 80.8% 52/94230402 0.0% 0/52 0.0% 126463610 63750945 +3329 chr4 + 190214555 182940463 182940462 182940521 59 AAACAAACAAACAAACAAACAAACAAAAAAACTACGAGGAAACACACTGTTCTTCAGTC chr4 - 94230402 88451176 88451175 88451234 5779169 5779168 5779227 59 AAAAAAACAAACAAACAAACAAAAAAAACCACTACAAGCAAATACTCAGTTCTCCTGCC ...x...................x....xx.....:..x...:..x.x.....:.x.:. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 94489287 NA +3001 chr4 + 190214555 182955247 182955246 182955286 40 AAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGAAAGG chr4 - 94230402 49250049 49250048 49250088 44980315 44980314 44980354 40 AAAAAAAAAGAAAAAAAAAAGAGGTGGAAGAAGAAAAAGG .........:............:.x:........:..... 40M 35/40 87.5% 40/94230402 0.0% 0/40 0.0% 133705198 56509357 +3574 chr4 + 190214555 182970755 182970754 182970939 185 AAGGAAGGAAGGAAGGAGGAAGGAGGAAGGAAGGCAGGAAGGCAGGAAGGAAGGAAGGAAGG----AAGGAAAGAAGGAAGAAAGGAAGGAAGGAGTGGGGATGTAGGGAGGAAGGAAGGGAAGGGAGAGAAGGAAGGAAGGAAAAAGGGAAGGAAAAAGGAAAGGAGGGAGGGAAAAAAGGAAGGAAA chr4 - 94230402 44053977 44053976 44054137 50176266 50176265 50176426 161 AAGGGATATGTGAAGAATGGAGGAGAAAGAAAAGAAGG-AGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATAC--------------------------AAAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGG-AAGAAAGGAGAGCAGTGAGACAGAAAA ....:.x:x:x....:.x.:.....:...:..:.x...-..:..:...::x:..:...x:..----:.:.......:.....x.::..x...x:x--------------------------..:.:.x....:...x:.x.x....:x..:x...x.....-...:.:....:.x.:x:..:x..:... 38M1D23M4I29M26D40M1D27M 102/157 65.0% 161/94230402 0.0% 32/157 20.4% 138916778 51297777 +3213 chr4 + 190214555 182970862 182970861 182970914 53 GAAGGAAGGGAAGGGAGAGAAGGAAGGAAGGAAAAAGGGAAGGAAAAAGGAAA chr4 - 94230402 44400495 44400494 44400547 49829856 49829855 49829908 53 GAGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAA ..:...:...::.............:....:.....:.:...:..x::.x... 53M 40/53 75.5% 53/94230402 0.0% 0/53 0.0% 138570367 51644188 +3732 chr4 + 190214555 182970893 182970892 182971077 185 AAAAAGGGAAGGAAAAAGGAAAGGAGGGAGGGAAAAAAGGAAG-GAAAAAGGGAAGGAAAAAAGGAAGGGAGGGAGGGAGGGAATAAAGGAAGGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGG--AAGGAAGGGAGGGAGGGAGGGAA-------TAAAGGAAG chr4 - 94230402 60992645 60992644 60992837 33237566 33237565 33237758 193 AGAGAGACAAAGCAGAATAAGAACAGGAAAGGGAAG--GGAAGTGAAAAAGTGAAGGAAACAAGGCAGAAGAACAGACCAAAGACAAAGGAGAAAACTCAGCATGCAAACAGTGAGAGATGAGAGAGACAGGATTAGAAACTGAGACAGGCAGGGTGGGGAAAGGAGAGACGGATAAAACCCTCACTAATGGAAG .:.:..:x..:.x.:..x:.:.:x...:.:..:..:--.....-.......x........x....x..:::::x..:xx::::.:......:::..xxx:.x.x.x.::x.:x..:...x:...:...x..::xx.....xx:...x..:x...--::....:....:..x...x::..-------...x..... 36M2D5M1I110M2I23M7I9M 111/183 60.7% 193/94230402 0.0% 12/183 6.6% 121978248 68236307 +3258 chr4 + 190214555 182970961 182970960 182971025 65 GAGGGAGGGAGGGAATAAAGGAAG-----------GAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGA chr4 - 94230402 36691893 36691892 36691968 57538435 57538434 57538510 76 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGA .::.....................-----------.:....:........x....:.:.:...:x..x:..xx... 24M11I41M 51/65 78.5% 76/94230402 0.0% 11/65 16.9% 146279068 43935487 +3253 chr4 + 190214555 182970980 182970979 182971055 76 GGAAGGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGAAGGAAGGGA chr4 - 94230402 51453165 51453164 51453240 42777163 42777162 42777238 76 GAGAGGAGGGAGGAAGGGAGGGGAGGAGAGAAAATGATGGAAAACATGGAGAGTAGGTAAGACAGTATGGTTGGGA .::....:.....:........:....:......x:.x.:..:.x.x:..:..x.:.x:...x..x.x..xx.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 131517815 58696740 +3258 chr4 + 190214555 182971054 182971053 182971118 65 GAGGGAGGGAGGGAATAAAGGAAG-----------GAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGA chr4 - 94230402 36691893 36691892 36691968 57538435 57538434 57538510 76 GGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGA .::.....................-----------.:....:........x....:.:.:...:x..x:..xx... 24M11I41M 51/65 78.5% 76/94230402 0.0% 11/65 16.9% 146279161 43935394 +3253 chr4 + 190214555 182971073 182971072 182971148 76 GGAAGGAAGGAGGGAGGGAGGGAAGGAAAGAAAAGAAAGAAAGAGAGAGAAAGAAAGAGAGAAAGGAAGGAAGGGA chr4 - 94230402 51453165 51453164 51453240 42777163 42777162 42777238 76 GAGAGGAGGGAGGAAGGGAGGGGAGGAGAGAAAATGATGGAAAACATGGAGAGTAGGTAAGACAGTATGGTTGGGA .::....:.....:........:....:......x:.x.:..:.x.x:..:..x.:.x:...x..x.x..xx.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 131517908 58696647 +3063 chr4 + 190214555 182988309 182988308 182988398 90 TGCACTCCAGCCTGGGCAACAGAGTGAGAC---TCAGTCTCAAAAA---AAAAAAA----AAAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437681 69437680 69437777 24792626 24792625 24792722 97 TGCATTCCAG---GGGATTGAGATTGAGATGGATCAACTCCAAAAATCCAATGCAATTTTGAAAAAAAAACAAAAAAAACCTATATATATATATATATAT ....:.....---...xxxx...x.....:---...::::......---..x:x..----:.........x........:x................... 10M3D17M3I13M3I7M4I40M 69/87 79.3% 97/94230402 0.0% 13/87 14.9% 113550628 76663927 +3275 chr4 + 190214555 182988345 182988344 182988417 73 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 37024478 37024477 37024550 57205853 57205852 57205925 73 TTAAAAAAAAAAATGAAAGAAAAGAAAAAGAAACACGAAAATGTTCATATATGTTCATACGCTCACAGAAATA .:...........x:...:....:.....:...:.::x.x..:.x:......:.x..:..:.x....x.x.:. 73M 51/73 69.9% 73/94230402 0.0% 0/73 0.0% 145963867 44250688 +3410 chr4 + 190214555 182988352 182988351 182988422 71 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACACACAC chr4 - 94230402 60979342 60979341 60979409 33250994 33250993 33251061 68 AAAAAAATAATAAAAACAAACAAAAAC---TCTATATATACACATATATACACACACACACAAAAAAAAAC .......x..x.....x...x.....:---.x........:.:.....:.............x.x.x.x.. 27M3D41M 55/68 80.9% 68/94230402 0.0% 3/68 4.4% 122009010 68205545 +3381 chr4 + 190214555 182988355 182988354 182988415 61 AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::....x:x.................:........::..x.x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 112280776 77933779 +3298 chr4 + 190214555 182988357 182988356 182988417 61 AAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 70707579 70707578 70707639 23522764 23522763 23522824 61 AAGAAAACAGAAAAACAGGAAAAGGAATATATATATATATATACACACACACGTACTCTCA ..:....x.:.....x.::..x.x:x..........................::..x.x.. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 112280778 77933777 +3263 chr4 + 190214555 182988358 182988357 182988417 60 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 24170079 24170078 24170138 70060265 70060264 70060324 60 AAAAAAGAAAAAAAAAGGATTGTTTTAATATAAGTAAATGTACACATACACACACATACA ......:.........::.x.:.x.xx.....x:..x..:......:.........:... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 158818279 31396276 +3443 chr4 + 190214555 182994272 182994271 182994433 162 ACTTAAAATATCAATAAAGAGA-TAGAAAACC-TCCAAAAGAAACCAAAAAATCTGGAGTTGAAAAGTACAATAACTGAACTGCAAAATTCACTAGAACAAGCTTGTCCAACCCACAGCCTGCAGGCCTCATGCAGCCCAGGATGGCTTTGAATGCAGCCTAAC chr4 - 94230402 10959588 10959587 10959737 83270666 83270665 83270815 150 ACTTCAAATATCTGTAAGGAAAATACATAGCTATCTATAGGATAGTGAAGAA---GGAGTGGAGC--TTCTAAAAC---------AGATACACCAGACCAAGCATGTCTAACTCACAGTCCACAGGCTGCATGCAACCTGGCACAGCTCACAGTGCGAGTtgac ....x.......x:...:..:.-..x.x.:.:-..:.x.:..x.x::..:..---.....x..:x--.x.x.x...---------.:..x...:...x.....x....:...:.....:.::.....:x......:..::.x.::...:xx.:...::x:.:.. 22M1I9M1I19M3D10M2D9M9D79M 98/148 66.2% 150/94230402 0.0% 16/148 10.8% 172034684 18179871 +3311 chr4 + 190214555 182994366 182994365 182994430 65 AACAAGCTTGTCCAACCCACAGCCTGCAGGCCTCATGCAGCCCAGGATGGCTTTGAATGCAGCCT chr4 - 94230402 16953699 16953698 16953763 77276640 77276639 77276704 65 AGCAGGCACATCCAACCCACAGACTGCAGACTCCATGCAGCCTAGCAAAGCTCCCACTGTGGCCT .:..:..x::............x......:.::.........:..x.x:...::x.x..::.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 166040667 24173888 +3311 chr4 + 190214555 182994366 182994365 182994430 65 AACAAGCTTGTCCAACCCACAGCCTGCAGGCCTCATGCAGCCCAGGATGGCTTTGAATGCAGCCT chr4 - 94230402 16951815 16951814 16951879 77278524 77278523 77278588 65 AGCAGGCACATCCAACCCACAGACTGCAGACTCCATGCAGCCTAGCAAAGCTCCCACTGTGGCCT .:..:..x::............x......:.::.........:..x.x:...::x.x..::.... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 166042551 24172004 +3065 chr4 + 190214555 183009110 183009109 183009158 49 TCTTTAGTTTCTGGTTTTTGCTTAAAAAAAAAAAAAAAGAAAGAAAAAA chr4 - 94230402 65615191 65615190 65615239 28615164 28615163 28615212 49 TTTTTTTTTTCAGAGCTTTGCTTAAAAAAAAAAAAAAAGAAAGGGAAAA .:...xx....x.:x:...........................::.... 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 117393919 72820636 +3278 chr4 + 190214555 183013257 183013256 183013463 207 TCACTTTCCTTC--ATCATTCGTTTTTTCT------------TCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCTCTTCCTCTTCTCCTCCTTCTCCTC-CTCCTTCTCCTCCTC-CTCCTCCTCCTTCCCCCCTTCCCCTTCCCCTTCC---CCTTCCCCTTCCCCTTCCCCTTCTC chr4 - 94230402 66025630 66025629 66025855 28204548 28204547 28204773 226 tcacttccttttctgttgtttgtttcccccACCGCCACCACACCCTCCCACTTTTCCTGCTCTTCTTCAGCCTGATCGTTCTGTCTCGCTTCTTTACTATTTTCTCCTTCCTTTTTCTTTCCTCTCTTGGCTCTGATGCCTTTGATCTCTCCTAATCCATCTCGCAGCTCTGCAGTCCAATTTTACCCCTCACTGTTCAAATCTTACTCCACCACTAACCTTTTTC ......:.:..:--:.::..:....:::.:------------:....::x..:.....x.........xx.:.xx..x.::.x.::.x....:.:x::x.::...:......:..:..:.:....:::xx:...xx.x.:.:.xx..-.....xx...x:...-.xx...:x.xx...xx::..x...:..x.:x.:.---:...x.:.:x..x..xx..:..:.. 12M2I16M12I105M1I15M1I34M3I25M 122/207 58.9% 226/94230402 0.0% 19/207 9.2% 116987627 73226928 +3339 chr4 + 190214555 183013258 183013257 183013413 156 CACTTTCCTTCATCATTCGTTTTTTCTTCCTCTT-CCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCTCTTCCTCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTCCTCCTCCTC chr4 - 94230402 93339644 93339643 93339786 890617 890616 890759 143 CACTCTCCTCCATCA-------------CCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCT-CTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCTGGACTTCCCATTC ....:....:.....-------------.....x-::...:...x.x..:::.::...:.x...x.........::.x.:..:....:..:...x..:.:.-....x.xxx.:x:.::xx..:...:.:.xx.x...:.:.x..xxx.:...:x:.. 15M13D6M1I66M1D55M 89/142 62.7% 143/94230402 0.0% 15/142 10.6% 89673614 NA +3900 chr4 + 190214555 183013264 183013263 183013385 122 CCTTCATCATTCGTTTTTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCTCTTCCTCTTCTCCTCCTTCT chr4 - 94230402 79652984 79652983 79653102 14577301 14577300 14577419 119 CCTTCCTTAGCTGTCTTCTTCAACTCTGGCTCATCTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCT---CTCTTCCTCTTTTATCCCTCTCATCTTCCTTTT .....x.:.x::..:..:.::xx....xx...x..::x.::....:x.:.:.:...::..x.:.x.....:.xx....:.x.:.::---...........:.x.:.....:x..:.....:. 86M3D33M 75/119 63.0% 119/94230402 0.0% 3/119 2.5% 103360280 86854275 +3308 chr4 + 190214555 183013294 183013293 183013391 98 TCTTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTTCTTCCTCTTCCTCTTCTCTTCCTCTTCTCCTCCTTCTC-CTCCT chr4 - 94230402 84694912 84694911 84695010 9535393 9535392 9535491 99 TTTTCCTTTAATTCTCTTTTCTTATTTTCTTCTTCCTCTGCCTCTCCCTCCTCTAGATGCTCATCTTCTGATGTACTTATTAGCTTCCTCTTCACTCCT .:.....::xx....:::.::.:x.::............x.....:........xxx.x...x..:...xx.x.x.:.x..xx.:....::..-..... 93M1I5M 65/98 66.3% 99/94230402 0.0% 1/98 1.0% 98318382 91896173 +3343 chr4 + 190214555 183013386 183013385 183013454 69 CCTCCTCCTTCTCCTCCTCCTCCTCCTCCTTCCCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTT chr4 - 94230402 20485618 20485617 20485686 73744717 73744716 73744785 69 CTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT .:.:.:x.::..x.:..x..:..:..:::......::...:.:........:.....:.::..:..:.. 69M 45/69 65.2% 69/94230402 0.0% 0/69 0.0% 162527768 27686787 +3127 chr4 + 190214555 183013390 183013389 183013485 96 CTCCTTCTCCTCCTCCTCCTCCTCCTTCCCCCCTTCCCCTT--CCCCTTCCCCTTCCCCTTCCCCTTCCCCTT--CTCCTTCTTCTTCTTCTTCTTTTTT chr4 - 94230402 20485614 20485613 20485713 73744690 73744689 73744789 100 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTTAATTTCATATTTATT ..:x:.:...x..:.:x..:.x:..::....::........--.:.:........:.....:.::..:..:..--..:x.x...:xx:...x.x...x.. 41M2I30M2I25M 63/96 65.6% 100/94230402 0.0% 4/96 4.2% 162527776 27686779 +19351 chr4 + 190214555 183020689 183020688 183021217 529 AATCAGAATGCATTAATACTAATGAAAAGGAGAATGCAGACCCCGTCTGACAT-ATTTTATACTGTTTAAA-GATAAACATTTGTGCACTGCAAGCCGCAAATGGATTGAAACTCCAGTGAGGACTTTATAAGCCATCTGCTAGTCTACTAATGAGGCTAGTAACTATCATTGTTTACGGATAGGCACCAGGGGTCATGGGTATTTGTTATAATGAAAGCTGCAATGCATCACTGCAGAAACTAAAAGAG----TCTTTCTTCAT---AAGGGCTAATTACAAATATAATAAAACAACATTT----AAAAAATCTCTTGAAGTCCACAGAGAAACCTAACTTGGCACACCAAGTACAAACAGTAGTACCCGCTCTGTTTGC-----------ATTTAGTGGATTCTGATTACAGAAGCCATATCATA---------TTTAACTACTAA--CAATACAAGGCCACCGATGGGTCCTTTGCCTCAGATCACTTAATCACAAGATGCTTTGTGAACCATCTGGATCTCTGAGATATTTGCTCTGAC--AATCTATGCATAGAGTATGCA chr4 - 94230402 52843374 52843373 52843927 41386476 41386475 41387029 554 AATCCAAATGAATTGCTACTAATAAAAACAA-AGCACAGAGTCCCTTTTACATTGTTTTATCCTGTTTAAAAGACAAACATTTGCACACTGCAAGCCTCAAATGGATAAAAGCTACCATGAGAACTT-ATAAGCCATCTGCTAGCTTACTAATGAAGCCAGTAACTATTATTGTTTACAGTTGAACACCGGGGGTCATGCGTATTTGCTGTAATGAAAGAATCAATGCATCACTGCAGATGCTAAAAGAGAACATTTTTTTTTATCCAGACGGCtaattataaatacaataaaataacaaattaaaaaaaaatCTGTTCATATCCACAGAGAAATAGTGCTTGGCACACTACATGCAAAATGCAGCACTC-TTCTGTTTTCTAGCAGTCTCTACTTGATAGACTCGGCTTACAGAAACAGAATTACAAAAGTTACTCTTCAACACTAAACAAATAGCTGACCACCAAGGAATGCTTTGTCCCTAATTCTCTAAT---------CTACCCAAACCTCCTGCATTATTTAATTGTTTGGTTTATCCGAATGTAATGATAAAATGTGCA ....x:....x...:x.......:....x:.-.:::....x:..x.:.x....-:......x.........-..:.........::...........x.........x:..:..x.x:....:....-................::.........:..:.........:.........:.x.:::....:.........x.......:.:.........xxx.................x:.........----.:...:..:..---:.x.........:.....:.......:....xx.----.........x..x.x:............:xxx:..........:.x:.:....xx.:..:..:.-:.......x.-----------.:..::.:..:..x.x........:.x:x..:.:.---------:..x.x:.....--x....xxx.:.....:.x.::.x.....:.:.x:..:x::....---------..x:x::....x:...x..:x:.x.:x.:....x.:.:x.--...x..xxx...:.:.:.... 31M1D21M1I17M1I55M1D122M4I11M3I34M4I64M1D10M11I35M9I12M2I44M9D40M2I21M 378/517 73.1% 554/94230402 0.0% 49/517 9.5% 130177315 60037240 +3319 chr4 + 190214555 183024416 183024415 183024496 81 GTCTCAATTTAGAAAAAAAAAAAAAGAGAGAGAAAGAGAAAGAATACACCTAAATGCC---AATTCATCCACTGCTTTAATTAT chr4 - 94230402 56794885 56794884 56794968 37435435 37435434 37435518 84 GTTTCACATTAAAAAAAAAAAAAAAGAGAGAGTGAGAGAAAGTGAACACAAAGCTTCCTCTAATTCTTGTACTACTTGCACTAT ..:...xx...:....................x:........x:x....xx.:x.x..---.....x.x:...:...xx.:... 58M3I23M 60/81 74.1% 84/94230402 0.0% 3/81 3.7% 126229531 63985024 +3423 chr4 + 190214555 183060165 183060164 183060261 97 ATTTCCTTTTTAAAGAA-GAAACATATTCC-ATTGTATGTATATATATATATATGTGTGTGTGTCACATTTTCTTTTCTCTTTTTTTTTTTTTTTTGAG chr4 - 94230402 45067177 45067176 45067275 49163128 49163127 49163226 99 ATTTACATTCAAAAGAAAGAAATAAAGTCTTGTTGAATTTATTTGGATATATACGTGTGTTTGTTGGTTTGTTCTTTTTTTTTTTTTTTCTTTCTGGAG ....x.x..:x......-....:.x.x..:-:...x..x...x.:x.......:......x...::xx..x.::...:.:.........:...:.x... 17M1I12M1I68M 69/97 71.1% 99/94230402 0.0% 2/97 2.1% 137992988 52221567 +3030 chr4 + 190214555 183060207 183060206 183060274 68 ATATATATATGTGTGTGTGTCACATTTTCTTTTCTCTTTTTTTTTTTTTTTTGAGACAGAGTTTCACT chr4 - 94230402 72456209 72456208 72456276 21774127 21774126 21774194 68 ATGTAACTGTTTGTGATTCTCACTATGTCTTTTCTCCTTTTTTTTTTTTTTTGATACAAATATTTGCT ..:..xx.:.x....xx.x....xx.x.........:.................x...:.xx..::.. 68M 50/68 73.5% 68/94230402 0.0% 0/68 0.0% 110603998 79610557 +3103 chr4 + 190214555 183065267 183065266 183065321 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAGACTCTGCCCACAGTTCCCACTCTCTTC chr4 - 94230402 12306886 12306885 12306940 81923463 81923462 81923517 55 AAAAAAAAAAACCAAAGAAAAAAGCAAGACATTTTCCACAGCTCTCACTCCCTCC ...........xx...:......:x.....x:.x:......:..:.....:..:. 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 170758381 19456174 +3117 chr4 + 190214555 183065325 183065324 183065395 71 TTCCTCCTGAG--------CAACTTGGTTTCCCTTATAGCCCTGCCTGGCATGGTGTGCCCTTTTTCTCCTGGGAACTG chr4 - 94230402 81747139 81747138 81747217 12483186 12483185 12483264 79 TTCTTCCTGATGACTGAACCACCCTGCCTGCCCTTGAAGCCCAGCCTGGCATGCTGTGCTCTCCTCCTCCAGAGACCTG ...:......x--------..x.:..x:.x.....:x.....x..........x.....:..::.:....x.:..x... 11M8I60M 53/71 74.6% 79/94230402 0.0% 8/71 11.3% 101318186 88896369 +3089 chr4 + 190214555 183073101 183073100 183073166 66 ACAAACAGAACTCGAGAAAGAAGAAGAGAAATCATCTTTTTTTTATTATTATTTTTTATTTTTTTT chr4 - 94230402 45339322 45339321 45339387 48891016 48891015 48891081 66 ACAATGAAGACTGAAGAAATAGGATGAGTTGTTTTCTTTATTTTATTCTTATTTTTTATTTCTTTT ....xx.::...x:.....x.:..x...xx:.:x.....x.......x.............:.... 66M 49/66 74.2% 66/94230402 0.0% 0/66 0.0% 137733779 52480776 +3000 chr4 + 190214555 183078354 183078353 183078392 39 TGCACGCACACACACACACACACACCTTCAAACATGGAT chr4 - 94230402 13693747 13693746 13693785 80536618 80536617 80536656 39 TGCACACATACACGCACACTCACACCCTCAAACATGGAT .....:..:....:.....x......:............ 39M 34/39 87.2% 39/94230402 0.0% 0/39 0.0% 169384607 20829948 +3381 chr4 + 190214555 183095629 183095628 183095756 128 CTTGTATATCTTGAGCAACTTTAATGTCACAGGAAA-ATAATTGTACTGGGA------TTGCTGGATTAAAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACATATAAACATTTTTTTTAAGAGG chr4 - 94230402 50558440 50558439 50558574 43671829 43671828 43671963 135 CTTTTTTGTATTGAGCTCTATCAATGTCATGAGAGACACAATTACCATTTAAAAAACTTTGCTTTCTTTAGTGCATGTGTTTGTGTGTGTGCATGTGTATACATGTATAGACAGAGAAAAGTTTTTTTTAATAAG ...x.x.:.x......xx:x.:.......:::..:.-.:....::xx.xx:.------.....xxx..x.:x.x:.....x..........::.....:.:::...:.xx...x.x...x:..........x.:. 36M1I15M6I77M 83/128 64.8% 135/94230402 0.0% 7/128 5.5% 132537189 57677366 +17396 chr4 + 190214555 183098938 183098937 183099643 706 TTCCTTCGCCCGCCTTCCTCCCACCTGGAGCCGCGGCCCCGC--GGGGCAGTGCGTCCGAGCTGGTGCGGCGACGCCGGCAGCGGCGGGGTTAAGC-TCAGGAATGCGGCGCGAGGAATGCGCATGCAGATGAGGCGGGCGGGCGCATGCTAATCGCATGCAAATGAGGGGC--CCGCCGCTGCCGCGGCAGCGCCGCAGCTTCCCGGATCCGAGCCCAGACGGCGGCGG-----CTCCGGCAGCCTGGGC----GCCGCGACCC--TCGGCGGCCAGAGGGGGACGGGGCGGAGGAGGAGGAAGAGGCGGAGGCAGCGGCGGCGAGGGGGAGGAGGGTTCGCTCGCCGGCTCCGACGCAGACATGGTGGACTGATCCGCAGCGGGGCCGCGAACAGCGTTTCCTGAGGCACCTCCCGCGCGTGGTTCCGCCGCGCCCCGCGCCCTGCGCCCCTCAGCCCCTCGCCGGCGCCCGCGTCGCGGGTTGGCAGCCTAGCCCGGCAGCCGCGTTCCCGC--CGCGTCCCGCGCCCGGTACCTATGGAGGCGCCGCTCGCCGGCGAGGCCGCCGACCATGCCTAGGAGGGCCGGGAGCGGTCAGCTGCCGCTGCCCCGGGGCTGGGAGGAGGCCAGGGACTACGACGGCAAGGTCTTCTACATTGACCACAACACCAGGAGGACCAGCTGGATCGACCCCCGGGACAGGTGGGCGCCGGCCGCGGGGGC chr4 - 94230402 52855957 52855956 52856559 41373844 41373843 41374446 603 TTCCTCCGCCGGACTTGTTCGTGCCTTT-TCCGCGGCCCCGCCCGGGTCCGGGCTTCCC--CCCGTCCCGCG--GGCAGCGCCGGCAGGGTTAACCCTGAGGAATGCGGCGGGAGGAATGTGCATGCAGATGAGGTGG--------ATGCTAATCTCATGCTAATGAGCGGCGGCCGCAGCCGCCCGGG--GCTCAGCCGGGTTCC----CCGCGCCCAGACGGCAGCTGGGCTCCTCCGGGAACCCTGACCCGGGCTGccgcccgcccgcccgcccgcGGCAGCCCCGGCACGGTGGGCCGA-GAGCCGGAGGC--------------GAAGGAG----CGCTCGCCGG---------------------------------GCTGCCGCCAGCGTCGTcccccggcgc------cgggccggcctcggctgcgggcc-----------ccctccgcgtccccccggcTC----------GGGTGGGGGCTT---------------TTCCCGCTTCCCTTCTTTCTTTCCGTCCCTATGGAGCAGCCGCCC-CCGCCG-----GCCGACCATGCCTAGGAAAGCGGGGAATGGGCAGCTCCCCTTACCCGCTGGCTGGGAGGAGGCGAGGGATTACGACGGCAAAGTCTTTTACATCGACCACAACACCAAGCAGACCAGCTGGATCGACCCCAGGGACAGGTGGGTGCGAG--GCGGGGGC .....:....x.x...x:..x::...xx-x............--...x.x.x..x...x--.:x..x.x...--.x.:..:x....:.......x.-.x............x........:..............:..--------.........x.....x......x...--....x..:...xx..--..x.x..x.xx.:..----...x...........:..x.-----......x.:..:x.:.----..:..x:...--:..x.x...x.x..x:.x.xx...:x:.x:..xx..-...x.......--------------.:.....----..........---------------------------------.xx.....x.:.:x...::..:.:x..------..x..xx.x:..x..:...xx..-----------.....x..x:.:.x.....x.----------..x...x:..:.---------------.......--.x.x..::x.x::.x..x.........xx.....:.-...x..-----.................::..x....::..x.....x..x:.:...xxx..............x.....:...........:.....:.....:.............:.x:...................x............:..x:.--........ 28M1D13M2I15M2D11M2D22M1I41M8D26M2I15M2D15M4D20M5I16M4I10M2I36M1D11M14D7M4D10M33D27M6D23M11D21M10D12M15D7M2I36M1D6M5D149M2D8M 443/585 75.7% 603/94230402 0.0% 139/585 23.8% 130242981 59971574 +3263 chr4 + 190214555 183099208 183099207 183099251 44 GGGGCGGAGGAGGAGGAAGAGGCGGAGGCAGCGGCGGCGAGGGG chr4 - 94230402 3154662 3154661 3154705 91075698 91075697 91075741 44 GGAGAGGAGGAGGAGAAGGAGGCGGCGGCGGCGGCGGCGAGAGG ..:.x..........:.:.......x...:...........:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 179944546 10270009 +3363 chr4 + 190214555 183103713 183103712 183103790 78 CTGCAACCTCCGCCGCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCATGAGTAGCTGGGATTACA--GGCACCACCAT chr4 - 94230402 18197126 18197125 18197205 76033198 76033197 76033277 80 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGT ..:..:..:xx:x.x:.............x...x..x.x........:x::.........:.:....--x.......::. 67M2I11M 56/78 71.8% 80/94230402 0.0% 2/78 2.6% 164906587 25307968 +3311 chr4 + 190214555 183130141 183130140 183130199 59 CTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCGC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.........x.:xx...x.xx.x.........:...........:......x.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 164933002 25281553 +3262 chr4 + 190214555 183132993 183132992 183133064 72 TTTCTTTTCTTTCTTTTCTTTTTCCCTTCCCTTTTTTTCCTTTTCTTTTCCCTTCCCTTTTTTCCTTTTCTT chr4 - 94230402 8141249 8141248 8141320 86089083 86089082 86089154 72 TTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ...x:.x...:.....::.x..:x::::....x.:...::....:........x.x......:....:..:. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 174991744 15222811 +3405 chr4 + 190214555 183133050 183133049 183133187 138 TTTTTTCCTTTTCTTTTTCCTTCCCTCTTCCCT--TACCTTTTTCCTTCCTTCTTCCCTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTTTGACCAGGTCTTGCTCTGTT chr4 - 94230402 52825842 52825841 52825972 41404431 41404430 41404561 131 TCTTTTCAATTTTTTTTTC---------TCCTTGATACAAATTCCTTTTATGCTTATCTCCTCTTACCTCAGTGCTTTTTCTACCTTTCTTCTTGTTCCTTTTATTTTTTTCTTTGTTTATGACAAGCTTTAGCTTTATT .:.....xx...:......---------...:.--...xxx..:.:..:x.x...x:..:.:...x:::.xx:x......:.x::..::.....x:.::....x:......:...x...x....x..x.:.x...:.:.. 19M9D5M2I105M 83/129 64.3% 131/94230402 0.0% 11/129 8.5% 130307208 59907347 +3215 chr4 + 190214555 183133051 183133050 183133112 62 TTTTTCCTTTTCTTTTTCCTTCCCTCTTCCCTTACCTTTTTCCTTCCTTCTTCCCTTCCCTT chr4 - 94230402 3592248 3592247 3592309 90638094 90638093 90638155 62 TTTTTCCTTTCTGTCTACCATTCCTTTTCCCTTAGCTGTTTCTTTCCTTTAATCTTTCCCTT ..........::x.:.x..x.:...:........x..x....:......:xx:.:....... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 179540803 10673752 +3014 chr4 + 190214555 183133066 183133065 183133158 93 TTCCTTCCCTCTTCCCTTACCTTTTTCCTTCCTTCTTCCCTTCCCTTTTTCCTTCCCTTTTTTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTT chr4 - 94230402 34820615 34820614 34820707 59409696 59409695 59409788 93 TTGCTTTTCACTTTCCTCATTTTTTGCCTATATTGTTCTTTGACCCTCACTGTTCTCTGCTTCTTTCATCTGTATTTCCTTTGTTTCTTTCTT ..x...::.x...:...:.::....x...x:x..x...::.xx..:.:x::x...:..x:..:.:.:x...x.x....:...x.......:.. 93M 58/93 62.4% 93/94230402 0.0% 0/93 0.0% 148312451 41902104 +3790 chr4 + 190214555 183154234 183154233 183154360 127 TCACTGGCTGTGTGATTTCAGGCAAGTTACTTAATCTTTCTGTGCCTCAGTTTCCTTATCTGTACAGTAGGGGTTATAGAAGGACCTTAA-GTCAAAGGCTTATTATGAGCATCCAG--CGATACCTGCT chr4 - 94230402 11947208 11947207 11947334 82283069 82283068 82283195 127 TCACTAACTGTGTGACCTTAGGTTAGTCACTTAATCTGCCTGTGTCCCAGTTTCCCCATGTATGAAAT---GATTATAATACAATGCTAACCTTGAAGGAACTTTGTGAAATCCCAGTTCTATACCTATT .....::........::.:...:x...:.........x:.....:.:........::..x.:.:x.:.---.:.....:x.x:.:x:...-x.::....xx:x..:...:xx:....--.x......::. 68M3D19M1I26M2I11M 82/124 66.1% 127/94230402 0.0% 6/124 4.8% 171207026 19007529 +3421 chr4 + 190214555 183155954 183155953 183156048 95 TGAGATTTTAA-GATGATGTGATGATGTCACTTGTGATTTGCCAATTCCGTTGTGTTGTTTTTTTCTTTCT---TTCCTTTTTTTTTTCTTTTTTGAGA chr4 - 94230402 33926073 33926072 33926171 60304232 60304231 60304330 99 TGAGATTTTAAAGATAATTTGATGAGGAAATGTATTATTTAAGATTACTGTTATGTTGTTGTTTTTTTAGTTGGTTGTTTTTTTTTCTTTTTTTCAAGA ...........-...:..x......x.xx.:x.:.x....:xx.x.x.:...:.......x....:..xx.---..x:........:.:.....::... 11M1I59M3I25M 69/95 72.6% 99/94230402 0.0% 4/95 4.2% 149229881 40984674 +5575 chr4 + 190214555 183165525 183165524 183165718 194 TTTTGAAGGCAGTTTAAGGAATGGGTGTGGAAGGGGGTGTGGGGGAAGGAAATCTCAGCAGAATGCTTTTAGATATTTCCTGTTACATAAATGCTACATACTTCTCATGCCTTCAGACTCATAGCAAATAGGACTGAAGCCCGTTGAGGCTTACATTTAATTACTGTT----ACAAAGAATGTAGAAACTATATAGGT chr4 - 94230402 52874520 52874519 52874697 41355706 41355705 41355883 178 TTTTGAAGGCAGTTTC-----TGGGTCTGG------GTGTGTGGGAAG----TCGCAGGAGAGCACTTGTG--TGTTTCCTGTTACATAATTGCTGTGTATTTCCCATTCCTCCAACCTTATTGCCAGAAGGAAGAAA---TTTGAAAACTTGAATTTGATTAATATTGTGAATAAAGAATGTGAAAACAGGAGAGGT ...............x-----.....x...------.....x......----..x...x...:::...x.:--.:...............x....:::..:...:...x...:..:x..:..x..x.:x....xx:..---:x.x:.::...:x....:....x.:..----.:.........::....x:x.x.... 16M5D9M6D12M4D19M2D65M3D27M4I26M 127/174 73.0% 178/94230402 0.0% 24/174 13.8% 130291005 59923550 +3624 chr4 + 190214555 183168924 183168923 183169006 83 CCACAACCTCTGCCTCCCGGGGTCAAGTGGTTCTTCTGGCTCAGCCTCCCGAGTAGCTGGTATTACAGGCGTGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx:x..:.:...x.......x...x:xx..........::.:.........x.:....--..........:::. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 164971798 25242757 +8961 chr4 + 190214555 183193593 183193592 183193714 122 TTGTAGGTTAACGAAGCCCTTGTCATTTGCTGATTGTGTTGGGGATGAGCTGCCGTGGGGATGGGAAGCAGGGTTTGACCCTCAGATTGGTGTCTACTACATCGATCACATCAACAGTAAGT chr4 - 94230402 52883453 52883452 52883574 41346829 41346828 41346950 122 TTTTAGGTTAACAAAACCCTTGTCATTTGCGGATTGTGTTGGGGATGAACTACCATGGGGATGGGAAGCTGCATACGATCCTCAGATTGGTGTGTACTATATCGATCACATCAACCGTAAGT ..x.........:..:..............x.................:..:..:..............x.x:.x:..:..............x.....:...............x...... 122M 106/122 86.9% 122/94230402 0.0% 0/122 0.0% 130310140 59904415 +14335 chr4 + 190214555 183207951 183207950 183208167 217 AGAAACCACGCAGATAGAAGATCCAAGAAAACAATGGAGGGGGGAACAGGAGAAGATGCTCAAGGACTACCTCTCTGTGGCACAGGATGCCCTCCGGACACAGAAGGAACTGTACCATGTGAAGGAGCAGAGGCTGGCGCTGGCCCTGGATGAATACGTGCGATTAAATGATGCCTATAAGGAAAAGTCAAGTTCTCACACAAGCTGTAAGTACAGT chr4 - 94230402 52897847 52897846 52898063 41332340 41332339 41332556 217 AGAAACGACACAAATAGAAGATCCCAGGAAACAATGGAGGCAAGAACAAGAGAGAATGCTGAAAGATTATCTTATGGTAGCCCAGGATGCTCTCAGTACTCAGAAGGAACTGTACCAGGTGAAAGAACAGAGGCTGGCACTTGCACTGGATGAGTATGTGCGGTTGAATGATGCCTACAAAGAAAAATCAAGCTCTCGTACAAGCTGTAAGTACAGT ......x..:..:...........x..:............x::.....:....::.....x..:..:..:..:x:x..:..x........:...x.x..x.................x.....:..:...........:..x..x........:..:.....:..:...........:..:.....:.....:....::.................. 217M 176/217 81.1% 217/94230402 0.0% 0/217 0.0% 130310104 59904451 +7563 chr4 + 190214555 183208922 183208921 183209088 167 TTAGTTTTTCTTTTTTCTCTATAAAAGTATTCTCAGGATCTTCATCCAGTACTAAATATGATCCCGATATTTTAAAAGCTGAGATCTCCACTACAAGATTAAGGGTAAGAAGTTTTAAATTGTGGT--TCTATGTTGACCCATATGCATAGAGTCTGAAGGCTGTGGAA chr4 - 94230402 52898863 52898862 52899023 41331380 41331379 41331540 161 ttattgttttttttttttttttttaaGTATTCTCAGGCTCTTCATCAAGCACAAAGTATGACCCTGACATTCTGAAGGCTGAAATCTCCACTACAAGATTAAGGGTGAGAGTTCTTAATTCATATTCATTTGTATTG-----TATGCAGGGTTTCTGA---CTGTAGAA ...x.x...:......:.:.x.xx.............x........x..:..x..:.....:..:..:...:.:..:.....:.......................:...:x.:....x.::.:x.--.:.:.:...-----......x:.xx.....---....:... 126M2I9M5D16M3D8M 122/159 76.7% 161/94230402 0.0% 10/159 6.3% 130310059 59904496 +3386 chr4 + 190214555 183209234 183209233 183209305 72 TAGTGTTTTGTTTGTTTGTTTGTTTGTTTTTTTGAGATGAAGTCTCACTCTGTCACCCAGGCTAGCGCACTG chr4 - 94230402 64129154 64129153 64129225 30101178 30101177 30101249 72 TGGTGTTTGGTTTTTTTGTTTGTTTGTTTTTCCAGCATTAATTTTTTCTGTGTCATCTAAGCTTGAGAACTG .:......x....x.................::::x..x..x.:.:x..x.....:.:.:...x.x.x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 119080080 71134475 +3383 chr4 + 190214555 183231196 183231195 183231284 89 AAAATTATTCACTGTACTAACAGAGTGAAGGGAAATTATTATTCCAACAGATACAGTGAAAGCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 63824660 63824659 63824739 30405664 30405663 30405743 80 AAGATTATGCACTGCA---------TACAGTCAGAATGTTATCCAAACAAATACAATAAAAGCAGTTTTTTGTTTTTTTTTTTTATCTT ..:.....x.....:.---------.:x..xx.:.x.:....:.x....:.....:.:.....xx......x............x.:.. 16M9D64M 60/80 75.0% 80/94230402 0.0% 9/80 11.2% 119406536 70808019 +7024 chr4 + 190214555 183240180 183240179 183240277 98 AAGGTTAAAAAGCTAAAGAGAGAGCTCTCACAGATGAAGCAGGAACTGCTCTATAAAGAACAAGGCTTTGAAACATTGCAGCAGTGAGTATGAAAAGA chr4 - 94230402 52903477 52903476 52903574 41326829 41326828 41326926 98 AAGGTTAAGAAGCTGAAGAGGGAACTCTCTCAGATGAAGCAGGAGCTGCTGTACAAGGAACAGGGCTTTGAAACACTGCAACAGTGAGTAATAAAAAA ........:.....:.....:..:.....x..............:.....x..:..:.....:............:....:.........xx....:. 98M 83/98 84.7% 98/94230402 0.0% 0/98 0.0% 130336703 59877852 +14486 chr4 + 190214555 183241843 183241842 183242174 332 ATTTTTAAGGCACATGAAATTATAACTCGCGTCACCATTT-GGGATTAAAGGTTAGCCAAACTTGCTGTCTTTGTTATATTGATGTAACAATGCTGTATTGTTTCAAAGCAGTTTGCTTGCAAGCAATTTTTATAGGAATCTAAGGCATGTTTAAGAATCTGTCAATAACATTCCACAAGAAAACAATAGACATTTGTTGT-AGAAATTCAGGCATTCTC-TTGGAATGATTCTAATCCCTTGAACCGAGAGCAGAAAGATATGATATCTAACA--TCAGAGACCTCTCCTGTTTATCTTAACTATAGACAAAATAAAGCTGTTCTTATTCAAATGT chr4 - 94230402 52904878 52904877 52905214 41325189 41325188 41325525 337 ATTCTAAAGCTGAAGGTAATAAAAACTCACGCTGCTGTCCCAAGATTAAAGGTTAGCCAATCACGCTGGTTTTATTATATTAATTCAACAATGAGGTATTGTTTTAAAGCAGCTTGCTCACAGGCCATTTTGATAGGAATCCAAAGCATGTTTCAGAAACTGTCAACAGCATTCCACAGAAATACAATGGGCGTTTGTTTTAAAAAATTCAGTCAGCCGCTTTTGAACAGTACTAATCCCATTAATTTAAAACAGGGAGAAGGAATATCGTATATGTCACAGATCCTTCTTGTCCATCTTAATTATATATAGAATAAAGCAGTTGCAATTTGAATGT ...:.x...x::x.x.x...x.x.....:..:::.::.::-::.................x.x:....x:...:.......:..x:.......xx.........:.......:.....::..:..x.....x.........:..:........x....x.......:.:.........::..x.....:.:.:......x.-.:........x..x:.x.-..x...:::.x........x.x..::x.:.:...::...x:x:.....xx.:.--...x...:.::..:...::.......:....x.:.:........x...x:x...::..... 40M1I160M1I18M1I53M2I61M 238/332 71.7% 337/94230402 0.0% 5/332 1.5% 130336965 59877590 +3288 chr4 + 190214555 183245203 183245202 183245269 67 GGCGACAGAACAAGACTCCATCTAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAAAGGAGGAGAAA chr4 - 94230402 37322372 37322371 37322436 56907967 56907966 56908031 65 GGTGAAAGAA--AAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAA ..:..x....--.::.:.:xx.:.....:..............:.:.......::.x.......:.. 10M2D55M 49/65 75.4% 65/94230402 0.0% 2/65 3.1% 145922831 44291724 +10187 chr4 + 190214555 183245369 183245368 183245552 184 ATGCTATCATTCTTTG----ATATTTTTTCTTTCTTTTTCTCTTTTCACAGAATTGATAAAAAAATGTCTGGAGGCCAGAGCGGGTATGAACTCAGTGAAGCCAAAGCCATTCTAACAGAACTAAAATCTATCAGAAAGGCAATTAGCTCAGGAGAAAAAGAAAAACAAGATCTGATGCAGGTACATT chr4 - 94230402 52906614 52906613 52906801 41323602 41323601 41323789 188 ATGTTAACATTATTTGCAGTATGCAGTATTAATATGCTCTTCTTTCCACAGAATTGACCAAAAAATGTCTGGAGGCCAGAGCGGGTATGAACTATGTGAGGCCAAAGCCATCCTGAGTGAACTGAAATCCATCAGAAAGGCGATAAGTTCAGGGGAGAGAGAAAAACAGGACTTAATGAAGGTATTTT ...:..x....x....----..::xx.x.:xx.x.x:.::.....:...........:x..................................xx....:...........:..:.xx.....:.....:...........:..x..:.....:..:.:.........:..::.:...x.....:x.. 16M4I168M 143/184 77.7% 188/94230402 0.0% 4/184 2.2% 130338755 59875800 +3549 chr4 + 190214555 183247653 183247652 183247749 97 TACTATATATACTATATATTATATGTACTATATTCTATATACTATATATACTATATGTACTATATATACTATATACTACATATATACTATATATACT chr4 - 94230402 67910059 67910058 67910155 26320248 26320247 26320344 97 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATT ..:..:......x...:xxx.x..:......xxxx..:...x..x.....:.:...:..x........x...:..x..:...:..::x.x...x.:. 97M 66/97 68.0% 97/94230402 0.0% 0/97 0.0% 115337594 74876961 +7880 chr4 + 190214555 183248696 183248695 183248865 170 TTTGTGTTTTCTGAACAGAGTCTTGCTAAGCTGCAGGAGCGGTTTCATTTGGATCAGAACATTGGCAGATCTGAGCCAGATTTGAGATGTAGTCCTGTGAACTCTCATTTATGTCTCTCCAGACAGACCCTTGATGCTGGGTCACAAACAAGCATTTCCGGAGATGTAAG chr4 - 94230402 52907512 52907511 52907681 41322722 41322721 41322891 170 TCTCTGTTTCCTGGACAGAGTCTTGCAAAGCTGAAAGAGAAATTCAGTCTTGACCGGAATATTGGGACATCAGAACCAGACCTGAGTTCCAGCTCTGTAAATTCCCAGCTGTGTTTTTCTAGACAAACTCTGGATACGGGGTCTCAGACTGACATCTCTGGTGAGGTGAG .:.x.....:...:............x......x.:...x::..:x:.:.x..:.:...:.....x.x...x..:.....::....x.x:..::....:..:..:..x:.:...:.:..:.....:..:..x...:.x.....x..:..x::...:..:..x..x..:.. 170M 117/170 68.8% 170/94230402 0.0% 0/170 0.0% 130341184 59873371 +6497 chr4 + 190214555 183249908 183249907 183250085 178 TTTTTCCACTAGATTGGAGTAAGAAGTAGATCAAATTTAGCTGAAAAGGTCAGGCTAAGCCTACAGTATGAAGAAGCCAAAAGAAGGTAATGACAGAGAAGCTGTTTTGT----------GCATGGCTCAAACATTTT---CTTTTCCAGAATTAATCTTTACTCCTGTGGTGACATCTGCTGGGCACTCC chr4 - 94230402 52908613 52908612 52908800 41321603 41321602 41321790 188 TTTTTTCAATAGGTTGGAACGAGAAGTAGATCCAATTTAGCAGAGAAGGTCAGACTAAGTCTTCAATATGAAGAGGCAAAGAGAAGGTAATG--GGGTTAGTCGCTTTGTTAAATTACGGTCTTGAGTCGGGCGCTTTCGACCTCTCCGATGCTAA-CATTGTGCTCGCAGTGACATCTAGTGGACGGCCC .....:..x...:.....:::...........x........x..:........:.....:..x..:........:..x..:...........--:.:xx..::.:.....----------x.x..:x..:::.::...---.:.:...::x::...-.x..::x.::.::.........:x...:.:x:.. 92M2D16M10I18M3I15M1D34M 122/175 69.7% 188/94230402 0.0% 16/175 9.1% 130341295 59873260 +24452 chr4 + 190214555 183253746 183253745 183254377 632 TTTTTTTTTAGTATGGCCAACTTAAAAATTGAACTGTCAAAATTGGACAGTGAGGCCTGGCCTGGGGCACTGGATATTGAGAAGGAAAAACTGATGCTGATTAATGAAAAAGAAGAACTTTTGAAAGAGCTTCAGTTCGTCACCCCACAGAAACGTACCCAAGATGAATTAGAACGCCTAGAAGCTGAAAGGCAGCGGCTGGAAGAAGAGTTGCTGTCTGTGAGGGGAACACCAAGCAGAGCTCTGGCCGAGAGGT------TTGTTTTCCTTCTGGAAATAGG-----------GCAGCTTAACTCTTGT-----------GGGG------GTGTCTTAACTGGATACTATTTTCCCTGGG---------TTTGGAAATCTCAATTGCATCTGTTCTTAGTGGACTGAGAAACAGCACAAATGGACTTTCTGT----AGAACAATAAAGTGCACCATCCTAATGCCCGACAGGATAAGT---TCTGTGTT--TTAGGAACGTGCAAA-ACCTGTGACAGATGTTGAATAACTAAGGAATGCTGACATAAAACCAGGAATG---TACATCATTGA-TGAAGTCTGATAACAATAGCTATAAACTA-TTGCACTCCGATAAGAAAAATTATCTAGACTGTTAGAGCAACTGAAGCTTCCTATTCTGGGTTTTATTACTCACAGGAATGCAA chr4 - 94230402 52912777 52912776 52913458 41316945 41316944 41317626 682 TTTTATTTTAGCATGGCTAACTTGAAGATTGAACTGTCTAAGTTAGATGGTGAGGCCTGGCCTGGGGCACTGGATGTGGAAAAGGAAAAATTGATGTTAATCAATGAAAAAGAAGAGCTTTTAAAAGAACTTCAGTTTATCACACCACGCAAACGTACTCAAGATGAGCTGGAGCAGCTGGAAGCAGAAAGAAAGAGACTTGAAGAGGAGCTGCACTCTGTAAAAAGCGCACCCAGTCAAGCACTTGCTGAAAGGTAAGGGGTTGTTTT--TGCTGATACTAAATGCCACTTTCTGCAGTCTAACCTTTGTACTCATTACACGGTGTGAACTGTGCCTTGATGGG---CTGTTTTCCTTCAGTAACTGTTCTATGTAGATCTTAATTAAATTTGTTATTAGCCCACTGGGCAGAAACACAAAGAATTCTTCTGTACTCAGAGAGAATACGAACACCCTGTATGTGCTCTGCAATATCAGTTGCTCTGCGTTTGTTACCAGCATGAAAATGCCTATGACAGACGTTAAATAACTGAGGAATGTCAGCATACCAGCAGGAGGGCAATACATCATTCACTGATTTCTGAT---AATAGCTGTAAACTGTTTGAACTCAGGTTACAAAGATTATCTTGATTGTTGCAACATCTGAAGCCTTTTACTGTGAGTTTTATTAGTTGCAAAAATGCAA ....x......:.....:.....:..:...........x..:..:..::..........................:.x..:.........:.....:.:..:..............:.....:.....:........::....x....:x........:........::.:..:.:x..:.....x.....:x..x.:..x.....:...:...xx.....:.:::.x:....x..:x:...x..x..:..:....------.......--.x...:x.x..::-----------....::....::....-----------..x.------...:...:.:x..---..:......:.x:.---------.x..x.:....:....:x..:....x....:xx....:.x.:x.:......x::x::......----...:x:.xx.x.x:....x.x:xx:...:.x:..:x..x...---....:...--...xx.:.:..x...-:...:.......:...:.......:.......::::....xx.x.....:x.---.........x.-...xx......---.......:......:-...x....x.:.x.x...:.......x..:....:x.:..x.......:.::..:.x..:.........x.::..::....... 256M6I7M2D13M11I16M11I4M6I13M3D14M9I63M4I42M3I8M2I15M1I52M3I11M1I11M3D15M1I84M 458/624 73.4% 682/94230402 0.0% 66/624 10.6% 130340969 59873586 +7969 chr4 + 190214555 183259619 183259618 183259738 120 ATAATTTTTTTTCTTCCTAGATTGAGATTGGAAGAGAGAAGAAAAGAGCTGCTACAGAAACTTGAAGAAACTACTAAATTAACTACTTATTTGCATTCACAACTTAAAAGGTGAGCTTAT chr4 - 94230402 52916643 52916642 52916762 41313641 41313640 41313760 120 ACATTTATTTCTGTTTCCAGATTGAAATTGGAGGAAAGAAGAAAAGAATTGGTACAGAAACTTGAAGAAACTACAAAATTGACGACTTATTTGCATTCACAGCTTAGGAGGTGAGGTTGT .:.x..x...:.x..:.:.......:......:..:...........::..x......................x.....:..x.................:....::.......x..:. 120M 99/120 82.5% 120/94230402 0.0% 0/120 0.0% 130342976 59871579 +29132 chr4 + 190214555 183260888 183260887 183261536 649 GTGTGTGCTTTTTGTCTTTC-----AGCCTCTCTGCCAGCACCCTGTCCATGTCATCTGGGAGCAGCCTGGGTTCCCTGGCATCGAGTCGGGGCTCTCTGAACACCTCCAGCAGAGGGTCACTCAACTCCCTCAGTTCCACCGAACTCTATTACAGCAGTCAAAGTGATCAGAT---AGATGTGGATTATCAGTATAAACTGGACTTCCTTCTGCAAGAGAAAAGCGGTTACATTCCTTCTGGACCCATCACCACCATCCATGAAAACGAGGTGGTCAAGTCCCCTAGCCAGCCTGGCCAGAGTGGACTCTGTGGAGTGGCAGCTGCAGCAACAGGCCACACTCCTCCACTGGCTGAGGCCCCGAAGTCTGTGGCCTCCCTGTCCTCGAGGTCCTCCCTTTCCTCCTTGTCTCCTCCAGGCTCTCCCTTGGTTTTGGAAGGCACGTTTCCCATGTCTTCTTCTCATGATGCCTCTCTCCATCAGTTCACTGCTGACTTTGAAGACTGTGAGTTGAGTAGCCATTTTGCAGATATCAGCCTCATCGAAAATCAGATTTTGCTGGATTCTGATTCAGGAGGAGCCTCCCAGTCTCTTTCAGAGGATAAAGACCTTAATGAATGTGCTAGGGAGCCATTAT---------ATGAAGGAACTGCAGGTAA chr4 - 94230402 52918419 52918418 52919051 41311352 41311351 41311984 633 GTGTATGTCTTTGTTCTTTCTTTGCAGCCTCTCAGCTAGTACGCTATCTGTGTCGTCAGGGAGCAGTCTGGGATCTCTGGCATCCAGCCGGGGATCTCTGAACACATCAAGCAGAGGGTCGCTCAACTCGCTCAGCTCCACGGATCTCTATTATAAC---CAAGGCGATCAAATAACAGATTTGGACTATCAGTATAAGCTTGACTTCATATTGCAAGAAAAAAGTGGTTACATTCCTTCGGGGCCTATCACTACTATTCATGAAAATGAAGTGGTCAGCTCCCATGGGAGACTGGGTTACAGT-GACTCT-----------CCCTCGGCCACAGAGCA---GCCCAAACTGACTGAGCCTCCCAAATCCGTGACATCGCTGTCTTCCAGGTCTTCACTGTCCTCCTTGTCTCCCCCAGGCTCCCCTTTGGTTTTAGAAGCTGCATTTTCTGT---CTCTGCTCAAAATTCCCCTCTGCATCACCTCAGTACAGACTTTGAAGACTGTG------------ATTTTGCAGGCATTAGTCTCTGTGAGAACCAAATATTACTGGACTCGGAAGCCAGAGCAGGATCTCAGATTCCTACAGACGATAAGGATCTTAATGAAAGCATTAGGCAGCCTCTGTCTTCTCTGCATGAAGGAAGTTCAGGTAA ....:..::...xx......-----........x..:..:..x..:..::....:..x........:.....x..:........x..:.....x...........x..x...........:........x.....:.....x..x........:.:.---...:.:.....:..---....x....:...........:..x......x.x:.......:.....:..............x..:..:.....:..:..:........:..:.......:x....x.:.xx::.:x..::.x...-......-----------x.:x.:..x....:x..---x..:xx....:.....x.:..x..:..:...:.x..x.....:..x.....:..x..x..............:........:..:........:....x::.:...:.::.---:...x....x:..x..:....x.....x:...x.:.x................------------.........::..:..:...xx:..:..:..:..x..:.....:..x..xx.x:...x..xx..:...x:..:.x....x.....:..:.........x.:::....x....x:.:.---------.........x.x....... 20M5I132M3D14M3I127M1D6M11D17M3D111M3D53M12D117M9I19M 467/616 75.8% 633/94230402 0.0% 50/616 8.1% 130342469 59872086 +28827 chr4 + 190214555 183263920 183263919 183265112 1193 TTTGCTGTCCAGTGCCAGTCCCTGCTGGATGACACCAACCACGTTGGAATAACTGCAAAGGCCTTCCGCAGTCAGTCACTGTCATTGTCAAAGTCAATTTCAGGCTGCTGTGGTTATTCCTGGGGGTAATCAATAAATCATGTCATCACCTTCACCCTTCACAAAGGGGGGTGGGCGGAGAGAAGGCACTTCATCATCAAGGAAAAAGCATTCCCACTGCCAGAAATAAAGTGGAAAATGCAGCAATCAATCCTGTAATCTGAAGCCTTAAAACTTAAACATCTTCACAAGATGTAAAGTCACGGCTCAGAAGGGGGCCAAAATGCATACCAATACAGATCCCTGCGCTCACTCTCACTCACTGGAGGATGAAAGAGCACCACAGGCTTGCAGCTCATTACAGTACAGAGCACAGCCTTAAATGAATGTTCCTTGCTCACTGCAGGATGCTGGTGTATGAATATGAGTTCGAGATAAAAGTTAAGTGGTCATTGGTACTAAAGATTCAGTAGCACAAAAAGTTTTTTAATGGTATTGGCTGGTGAGGAGTTCCTGTGAGTCAAAGACATTTTTTCTTTATTTCTGTTAGAATAGTAGCACAGGAGATGTAGGATATGGCATGTG---GAGAGAAGGGGAGACCAAAAGAGGTGGAAACTTATCCATTGAGTAGCTAGAAGCTCTCTCTGTGATAGAAATGTCACTTGAGGGAGATAGATCATTTCCTATTCCTGAATATATGAACACTGCAGTGAATGCTTGAAAGAAAGAGACTAAGGACCAATGAGAATTTGTGTAATTCATCCCTTCCCTTAAA-------ATATTTCAGGACAAAGAAAAACCATATTCTCTTCCAAG-TAAT--GACTGAAAAAACTGGCGTCCCAGGAATCTT--ATAAGTCATAGTGCCTTGAGTTGTTTACAGCTGTAGATTTGAATATTAACATCCTTGACTCCCAG--AAGGAAATCTTATTTTGGATTGCTCA-TGACCAAACTATGTATGTATTTAATACTTAACTTTTCCAAATAAGACATTCT--GATTAGTGCTC--TCACCCTCCCCTCCATAGATGTGGAAAAATCATTACCAAAAAGAAGAGTGATCCACTTGCTTGGGGAGAAAACCACTTGTGTGTCGGCTGCTGTGTCTGATGAGTCTGTGGCTGGAGACAGTGGGGTCTATGAAGCTTTCGTGAAACAGTAAG chr4 - 94230402 52920250 52920249 52921367 41309036 41309035 41310153 1118 TTTCCTCCTCTGTACATGTCTCTGCTGTCAGAAACCAA----GTTGGAATATC-ATGTAGTTCTTCCACAGTCAGTCTCTGTCGTTGTCAAAGTCAATT-CAGGCTGCTGTGGTAATTCCTAAGGGTAATCAATAAATCATGTCATCACCTTCACCCCTCACATGGTGGGG-GGGAAGGGAAAGAGCACTTCATCATCAAGGAAAAAGCATTCCTACTGCCATAAGTAAAAGCGCAAATGCAGCAATCAATCATCTAATCTGAAGCCTTAAATTTTAAACATCTTAACAAGATGTAAAGTCATGATTCAGGTGGGGACCATAATGCATACCAA----------------CATCCTCACCCCTTGGCAGATAACAGTACTGCATAGGCCCTCAACTAACTGAGTTGCAGAACGTGGCTTTCAGTGAATGCTGCTGCTTTGCTGCCTGAAACTAGTGTATGAATACGGATTGAAGATTAAAGATGAGTAGTAGTTGATAGTAAAGACTCGGTAGAATAAAAA-TTTTTTGATGATA--------------------GAAAACCAGAGGGTATTTTTC---ATTTCTAGTAG--TTATATCACCGG-------GGAGAGTGCTTCTGTCTGACTTATAAATATTTAACAAAAAGTAGGCAATCACTTTGCACGTAGCTGAAGTGTTTCTATAGTGTAGAATGTGAACATAGCAAATACAGATT--------------CATAGATGAGGA---TAATGGGAGTT---AATAATGATGATAATGAAGGATAATAACTAGCTCAGCTGATACAGGTGATGACAGAAGCATGTATTTTGGAATGGAATAACAGT-TGTACATTTTCAAGTTCATCAGTTTGGATATATCTCTAGCCAAAACATGTGGAACCAGTAATACAGTCTCAGAATGTTTAATGATGTGGAAC--AAAACTA--CTCTGTGATGCTCAGTTAAGGGTCACTGCTTTCAACTTGACAACTTTCTAAACTATGCACTTCTCT----------TTTTCTGACTATTAATCTCTTGGACTGATTTTCATTCTTCTTTCTTTTCATAGGTATTGA------CTTGCCAAGAAGAGCAGCTAGTCATCTGCTTGCAGAGAAGACAGCTTGTGTATCTGCTGCCGTGTCTGATGAGTCTGTAGCTGGAGATAGTGGTGTATACGAAGCTTCAGTGAAACAGTAGG ...x..x::.x..:.xx...:......xxx..x.....----.........x.-:::x..x:.....:.........x.....:...............-..............x......::..................................:.....x:.x....-...x:.:..:.::.............................:.......x..:....:xx.x.................x.x.................x:...........x................:.::....:x....:...x............----------------..::.....:.x:...x:...:.x..x:.xx..:....::x..:..x.:.:x:x.:....:.:::..:..x.:......:.x..xx:.::....xx..x:..:...........:.::..x:....x....x.:...:..x:...:..x......:..:....x.:.....-......:...:..--------------------.x:.::..:..:xxx......---......:x...--.x:..x...x..-------...x.xx..x.x..---..xxx.x:::x.xx:x.x..:.:..:.:x.x.:.:::xx::x......::.:xx.:...x.:xx:.....xxxxx..x.::x::.x.:....:--------------x...x....:x.---:.:..::x.:.---..x..x..x:x...x..xx:..:.x..:.x.:x:.::.x..x.xxx:xx.x.x.-------:.....::.:.:::.:x..x.x:-.:.x.x:..:....-.x..--.x:..:.x.x.::xx::x..x.::x..x.x--.:x...x...xx.:..::::x......xx.x...:..x:--..x.:..--x..:x...:x.:...--....:xxx..xx...:::x...x:x.-.xx.:........:.:x.x.:.----------.....::.x..xx.xx:...--..:.::.x:..--..x:.:.:.::.:.....:.:.x..------x..:....:....:x..:x.x:..::......x:.....:..x:.......:..x.....:.................:........:.....x..x..:.......:x...........:. 38M4D11M1D45M1D71M1D161M16D171M1D13M20D21M3D11M2D12M7D14M3I93M14D12M3D11M3D54M7I23M1D14M1I4M2I30M2I39M2D7M2D15M2I26M1I22M10D20M2I11M2I25M6D122M 735/1096 67.1% 1118/94230402 0.0% 119/1096 10.9% 130343670 59870885 +8093 chr4 + 190214555 183265658 183265657 183265958 301 TAACTGTT---CATCTAC-TCCCTGTCCATATAGACCTAGTGAAATGGAAGATGTCACATACAGTGAAGAGGATGTAGCCATTGTAGAGACCGCCCAGGTTCAGATAGGACTCAGGTAAGGAATGTACGTGGGAAAGGAGCAGTTCTGACATCTGTGCAGGGCAAGTGGCCTGTGGTGATTCCTGACTTCATTTAGCCTCTCTTTTGACAGATACAATGCAAAAAGTTCAAGTTTCATGGTGATTATAGCACAGCTCCGAAACCTTCATGCCTTCTTGATACCTCATACTTCAAAAGTGTAAGTA chr4 - 94230402 52923559 52923558 52923843 41306560 41306559 41306844 285 TAACTGTTGCGTATTTACCTGCTTGCCC---TAGCCTAAATGAAACTGAGGACATTGTATACAGTGAAGATGATGCAACAGCACTAGAGGCTGCCCAAGTTCAAATAGGACTCAGGTGAGCAA------CCAGCAAAGAGATTTTCTG-TTCCTATGTAAATAAA--------TAGTGAACTTT--CCTCATATTGTCCTTTCTTTAACAGATATGACCACAGCAATTCAAGTTTTGTGATAATCATAGTCCAGCTCAGAAATCTTCCAGTGTTTTCTGTCCCCCTTGGCTCTAAAGTGTAAGTA ........---:..:...-.x.:..:..---...x.:x.:.....:x..:..::.:::............x....:.:.x::xx.....:.:.....:.....:.............:..x..------:x:.x..:...xxx.....-:x:..:..:.::xx..--------.:....x:::.--.:....x.x.:.::.::...:.......::.:xxx.:x.:.........::..:.:..:....:x......x....:....xx.:x..:.:x:.x..:.x.:x:..x............ 8M3I7M1I9M3D92M6D19M1D16M8D11M2D119M 186/281 66.2% 285/94230402 0.0% 24/281 8.5% 130342099 59872456 +12693 chr4 + 190214555 183268926 183268925 183269166 241 TAATTAAAGTACCTATGAAATCCATTTTATTCTTGTTCTTTGCAGATATTTTAGGGTTGCCGTTCTTCCTTCCTCAACTGATGTCAGCTGTCTGTTTCGCACAAAAGTTCATCCGCCCACAGAATCCATTTTATTCAATGATGTGTTCAGAGTCGCCATTTCCCAAACAGCCTTACAACAGAAGACACTGAGGGTAGACCTTTGCTCTGTCAGTAAACACCGAAGGGAAGAATGCCTGGTA chr4 - 94230402 52925562 52925561 52925798 41304605 41304604 41304841 237 TAGTTTAAATACAGGTAAAG---ATTTTGTT-TTGTTTTCGACAGGTATATTAGAGTAGCAGTACTTCCATCCTCAGCTGATACCAGCTGTCTGTTCCGCACAAGAGTTCATCCTGCCATGGAAACCATTTTACTCAATGAGATATTCAGAGTTGCCATTTCCCAAGGAACACTTCTACAGAAGACACTGAGAGTAGATGTTTGTGCAGTCAGTAGAAGCCGTCGGGAAGAATGCTTGGTA ..:..x..:...xx:.:..:---.....:..-.....:.:x:...:...x....:..x..x..x.....x......:.....::............:.......:.........xx...::...x........:.......x:.:........:............:x.:.x:.x.x...............:.....:x....:x.x.......:.x:...xx...........:..... 20M3D8M1D209M 183/237 77.2% 237/94230402 0.0% 4/237 1.7% 130343364 59871191 +9567 chr4 + 190214555 183271049 183271048 183271250 202 TTTTTTTCTTTGTTTTCTTTCACTTACATAGGCTGGAACTCAGATCAGCCTGGCAGATTTACCATTTTCCAGTGAGGTTTTCACTCTATGGTATAACTTGCTTCCTTCCAAGCAAATGCCTTGCAAAAAGAATGAAG---AAAATGAGGACTCTGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGACTTGGTGAGTCAA chr4 - 94230402 52927354 52927353 52927550 41302853 41302852 41303049 197 TTCTTCCCTTTATTTT--------TGTGCAGGCTGGAACTCAGATCAGTCTGGCAGATTTATCATTTTCTGATGAGACTTGTACTCTGTGGTATAACCTTCTGTCTTGCAAGCAAATCCCTGGCAAAAAAAACAAGGATCAGAATGAGGAGCCCATGTTTCTTTTAAGCAAGCAGTCATCAGACTCATTGGACTTGGTGAGTGAA ..:..::....:....--------.::::...................:............:.......:::....::..x:.....:.........:.x..x:...x.........x...x.......:..::.:.---.:........x:.::.:....xx::..:.x...x..:.x:...:..xx.:............x.. 16M8D113M3I65M 144/194 74.2% 197/94230402 0.0% 11/194 5.7% 130343695 59870860 +6533 chr4 + 190214555 183282689 183282688 183282914 226 TGTTTTTGTTTTACCATAGGCTAACAATGCTAAGAGAGGCCTCTGATGAAATTGTGGCTGAAAAAGAGGCTGAAGTTAAATTGCCAGAGGACAGTAGCTGTACAGAAGATTTAAGTTCATGCACTAGTGTGCCTGAGATGAATGAAGACGGGAACAGGAAAGAAAGCAACTGTGCCAAAGACCTCAGAAGTCAGCCACCTACTAGAATACCAACACTGGTGACTAT chr4 - 94230402 52929196 52929195 52929413 41300990 41300989 41301207 218 TGCTTTTGTTC--ATGCAGGTTAGAAATGCTTGCAGAAGCATCTGATGAAATTGGGGATGAAGAGGAAGATGGCATTAAGCTGGCAGTAGAAGGCAACTGTACCGATGACACGGGGTTATTCATTGATGCAGTAGAAACTGAGGAAGATGAGAACAGACAG------AACAGAGATGAGGCCCGTGAAAGCCAGCAAGCTGCCGTCATACTAACACTGGTGAGCAT ..:.......:--x:::...:..:x......x:x...:..x.............x..x....:.:..:.x..:x:....::..x...x:..x:.:.:......x..x..:x:::.x.:..x..:.::..::x:x..:.:x:.x.....:.:......:x.:------...x.x.x::.:.x..x:::...:....x.x..:.::xx....:...........x:.. 11M2D148M6D59M 136/218 62.4% 218/94230402 0.0% 8/218 3.7% 130353493 59861062 +10994 chr4 + 190214555 183284197 183284196 183284395 199 TCCTGACAAATTGTTAACTTCTCTT-ATAGGTTGACAAAGAGACAAACACTGATGAAGCCGCTAATGACAATATGGCAGTTCGCCCCAAAGAGCGCAGCAGCCTGAGCTCTAGACAGCATCCGTTTGTGAGGAGCAGTGTGATAGTGCGCTCACAGACCTTTTCTCCAGGAGAGCGGAACCAGTACATCTGCAGGGTAAG chr4 - 94230402 52931303 52931302 52931500 41298903 41298902 41299100 198 TTCTTACAAACTG--AATTCCTTTTGATAGGTTGATAAAGAGACTAACACTGAGGAATCAGTTAACGAGAATGCAACAGTCCGACCCAAGGACAGAGCCAGCTGGAGCTCAAGACAGCGTCCCTTTGTCAGGAACAGCATGATTGTGCGCTCACAAACCTTCTCGCCAGGCGAGCGGAACCAATACATCTGTAGGGTAAG .:..x.....:..--..:.:..:..-.........:........x........x...x.x.:...:..x...::::....:..x.....:..xx.x:x....:x......x.......:...x.....x....:...::....x...........:.....:..x.....x...........:........:........ 13M2D10M1I174M 155/197 78.7% 198/94230402 0.0% 3/197 1.5% 130352894 59861661 +6285 chr4 + 190214555 183285960 183285959 183286078 119 TTGCCAGTTAAATCGGAGTGACAGTGACAGTTCAACCCTGGCTAAAAAATCACTGTTTGTGAGAAACTCCACCGAACGCCGCAGTTTGAGGGTCAAAAGGGTATGTATTCCCTCAGCCA chr4 - 94230402 52933862 52933861 52933980 41296423 41296422 41296541 119 TTGACAGTTGAGTCGAAGTGACAGCGACAGCTCAACACTAGCCAAAAAGTCTCTCTTTGTGAGAAATGCCACAGAAAGGAGGAGCCTAAGAGTCAAACGGGTATGTACTGCATTACCTA ...x.....:.:...:........:.....:.....x..:..:.....:..x..x...........:x....x...x.xx.x..::.:..:......x.........:.x.x.:.x.:. 119M 89/119 74.8% 119/94230402 0.0% 0/119 0.0% 130352098 59862457 +13592 chr4 + 190214555 183289366 183289365 183289640 275 TTCGTCATTCCGTTTCTAACTATCCAGACGGTTTGCCAGTCAGTCCTTAGAAGAACAACACAGGAATGCCCAGTGCGGACATCTCTAGACTTAGAACTGGACCTTCAGGCATCTCTGACCCGGCAGAGCCGCCTCAATGATGAGCTGCAGGCGCTGAGGGACTTGCGGCAGAAGCTGGAGGAACTGAAAGCTCAGGGAGAGACTGACCTTCCACCAGGCGTGCTGGAGGATGAGAGGTTCCAGAGGCTTCTGAAGCAAGCTGAGAAGCAGGTACG chr4 - 94230402 52935016 52935015 52935286 41295117 41295116 41295387 271 TTCCTCTTTCC----CAAATGATTCAGCCTGTTTGCCAACCAATCATGCGCAGAGCTACGCAAGAGTGCCCTGCACGCACTTCCCTAGACTTGGAGCTGGACCTCCAGGCGTCACGCACACGACAGAATCGACTGAATGATGAGCTTCAGGCCTTGCGGGATCTTAAGCAGAAGCTTGAAGAAATGAAAGGTAGAGGAGAGACAGACCTTCCCCTGTGCGTACTGGAGGATGAACGATTCCAGAAACTCTTGAAGCAGGCTGAGAAACAGGTATG ...x..x....----.x..:x..:...x.x........::..:..x.xx.x...:.x..:..:..:.....x.::..x..x..:........:..:........:.....:..x.xx..x..:....::..x..x...........x.....x:..x....::.xx:.........x..:...x......x.x::........x........x.::x....:...........:x.:.......::..::.......:........:......:. 11M4D260M 200/271 73.8% 271/94230402 0.0% 4/271 1.5% 130354350 59860205 +9228 chr4 + 190214555 183312333 183312332 183312470 138 TTTTCCAGGCTGAACAGTCCAAAGAAGAGCAGAAGCAAGGTCTGAATGCAGAGAAGTTGATGAGGCAAGTCTCCAAGGACGTGTGTCGGCTCCGGGAGCAGAGCCAGAAGGTGCCTCGGCAGGTGCAGTCCTTCAGGT chr4 - 94230402 52940922 52940921 52941059 41289344 41289343 41289481 138 TTTTACAGGCTGAGCAGTCGAAAGAAGAGCAGAAGCGAGGTTTAACTGCTGAGAAGCTGATGAGGAAAGCTTCAAAGGATGTATGCAGGCTACGGGAGCAGAGTCAGAAAGTGCCACTACAGGTGCAGTCATTCAGGT ....x........:.....x................:....:.:.x...x......:........x...::..x.....:..:..:x....x...........:.....:.....x.x:...........x....... 138M 114/138 82.6% 138/94230402 0.0% 0/138 0.0% 130371411 59843144 +12324 chr4 + 190214555 183315658 183315657 183316553 896 TCTAGGGAGAAGATTGCCTACTTCACCAGAGCAAAGATAAGCATCCCATCCCTGCCAGCTGATGATGTGTGATTACATG-ACTTAAGAAATTATTTTTTCATCTGTTCACTTTCTTAGGGAGGGTAAAAGACTGAAGATTTGTGTTTTTGTTTTGGTG-TTTGGTTTTTTTTGGTAACGTAACTGTCAACTCTTGAAGAACTTTTATTTCACATC--AGATTTTCAACACATTAATTTGTAAAGTACCTTGAGTGTAATTTTTATATGCTTAAAAAAG----AAAAAATCATATAAGAAAGATGGGATAA------CCTGGTACACAAATG------TTGCCCAGTATGTGCGCATTGCCAGTGGACTTCATTTTGTAAAAAT--------GGAATAGAGGCAGTACCCCACATGTGTACTGTTGAGCCG---GCTGTTGAGAAACAACTTGGTTCAGCCGGTGGT--TTTGCTTCTCCTTTGTGTTCCTGTGAGTAGGCTGTGCCGATGGCAGCAGCGCCACGTGGTATCTGTGCGCTGGCGAGGAGAGGAGCGCTTTCCATTTGGAGGCAG-TGTGAGCACACGCTGGAGTGCAGCGTTCCAAAGTCCGCCCGAAATGGATGCTGCGTCCACGGCCATCACCTGTGCGGGAACACCTGGTTTCCTTAAGACAATTTCC-----TTTTTGTCCTTTTATATTTTTCTAAAGAAAACTAAGATATAAACTACCAAGTGCTCTTAAGAATAAAAATAAGAATAAGAATACAAAGGAGCACTACTCTTGGCTACAC-GAAAGATCT-TGGGATTCATGACACTGAGGGCAGGGAGAAGAAAGAACACCAGCCACGCAGAGATACAAATAAGCTCATCAAATGAGCAGCTGGTTTGTCTCACTCAGCCTGAATTTGCATTAAGT--GT----TCAAAAGTGAGTTT chr4 - 94230402 52942390 52942389 52943239 41287164 41287163 41288013 850 TTCAGGGAGAAGATAGCATATTTCACAAGAGCAAAGATCAGTATACCAGCCCTTCCAGCTGATGATGTATAATTATGCATATTCATTCAAGTGTTTTTTCCATTGCTCATCTTTT-----------------------------TTTTTTTTTAGATGAACTTCTTATTTCTAGTGAC--------CTTCTTTTACAGCTCTTCTGTTTTACATTCAAGATT---GATACATTTATTTGTAAAATAC----AGTG-AATTGTTGTATGTCTAAAAAAATGACAAAAAAAAAAAAAGGAAAACCAAAGTAGATCAATTTTGGTATACTGATGCTGATTTTGTACAGTTTGTATGTATTGCATGTGT-TTTTATTTTGTAAAGATGGAACAAAGGAACAAAGGCAGTACTGAGCATGTATCCTGTTGAACCGCACTGTGTTGAGAAAT-ATTACGTTCAACAGAAGATTGTTTATCTTTTCACTATTTTCATGTGAGCAGACTGTGAAGATGGCTGTTTTGCCATGCAATATTTTTGTAT-----AAGAGTGTGACTTTTGTAGTTTGAAGTTAACTACAAGTGTAAGCTTCTTTCCAAAACATCAAGGCTGCCTCACAACAGCTGCTAATT--AGATTCATCACCCACATTGGAGTTTTTG--TTTCTAAGAATAAATTTCTTCTGTTTTTGTTCTGTGATG-TCGTATAGGGAGAGACAAAATTCAGAGT--TAAGTTTTGT---------------------GAATGTACAG------TACTTTAACCTGCACTAAAAGATTTCTTGCATCTGTGGGAGAATGGGGAAAGACAAGGCAGACAAGCAACC-CTAAAAACTTCCTATGAGACTACCAAAAGGGCAGCTGCTTT------CTGAACTGGAAGCTGAATCAAGTTGGTAATACCAAAAGTGAAATT .::...........x..x..:.....x...........x..:..x...x....x..............:.:....::::-.:.:.xxx..x.:.......xx:..:...::..:.-----------------------------.....x...x.:..-x:.xx..x...:.:..:..--------.xx..:..:x..xx...:.:...:....:--.....---:.:.....x.........:...----....-....x..:....::.......:----......xx.x.x.:....:x:::::..:------::.....:..x:...------...:x....x...::.:.....xx...x-:..:..........:..--------....:.:.........:xx:.....:.x.......:...---xx..........:-.:.xx.....:.x.:x.:.--...:::.:.:.x:.:.x...x......:..:.....xx......x.:xx:....:.:::...:.x..:::-----.:...x.x::.x:..x:x:....:..x:.:-.:::..:::.x...xxxx.x..:x::x:...:.::xx.:.:x..::.x....:xx.--.x:x:.......:::::x...::x::..--..:..x.::.:..x..:.-----.......:..x.x..:-.:x.x..::..:.:x:..:..x:.:.x.--:....x:.x.---------------------....::.x..------....:.x:x..:...-:......:.-.x.x..:::..:x.xx:x...x.::..x...:x...xx.x..:..-.xx.:.:x.x.xx..:..x::.:....x.:.......x...------..x.:.:x...x:..x..:....--..----:.........:x.. 79M1I35M29D14M1I19M8D29M2I5M3D22M4D4M1D22M4I28M6I15M6I28M1D17M8I39M3I13M1D19M2I70M5D30M1I56M2D28M2D18M5I16M1D28M2D10M21D10M6D15M1I9M1I45M1D41M6D23M2I2M4I14M 514/803 64.0% 850/94230402 0.0% 140/803 17.4% 130373268 59841287 +24659 chr4 + 190214555 183317512 183317511 183318501 990 AAGGTCAAATGTGAAAGACAGAAGT----------TTATTTAATGTAGAGGT-AAATGAAGGTGAGCTGTTTTCAGCATCTTAGTTTGACCATGAAAATGTCTATAGAATTATGTGTAGTTGTTCCGTACGATTTTATTTTCTTCATTTATTTATTTACAGTCTTATTTATGTTCTGTTTAATATATAGTTTGATTCTGGCCATTTTAAATATTTGACACAGAAGAGACTATATTGGAA--TATTTACAGCTTTATAAGTCTTTCATCAGATTAGCTGTTGACTTTTTGTAATACAAAAAGTTTCAGACAA-GTATTAAAGAATAAAATCTGTCTCAGGCTGGTAGTTAGCAGTTGTGACCAAGATGCTTTTGGTTGTTG----TATTTCACAAAATTTCCTCATTTCTAACATGAGAGATGAACTTATTTTAATATAATCCTTTTTCTACACTTTAAAAGTCAGCAATAGTGTTATGTATTTATAGGCAGCTTTTAATAATCTTGTCATATTTGTACTAACCCAAATGATTCACAGTGACAAAACATTTTAATAACTTGATCACAAAACCAT--ATGGA---------CAAATATGAAT-----------TTTAATATTATAAATACTATTTTTAAAAGGTAGAATTTA-TTCGCACAG---GGTAAAAAGAATGTAATATTTAGTTCTCAAGTTTGAATTATCAGTATATTATTACAATTTTGTATATCAGAATCTTAAGTGTTACAGGTACAAAAAGAATATTGCTAGCCAAATGAACAAAGTTTAGCTAAATCTCT-GTAGCATGCAAATCAAATAAATTAAAATTTTTT---GCTATTGCTTTATCTATATTGTCTTAAATATCAAAAGCTCAGGACTGAACTTAATATTTAATCAGGTTAAATTCTGAACATGTTTCTGTTTTAATTTGTCTTGTTTGTAAACGTATGCAAATACATCACATAGATTAACTGGTTTCTGCACTTTCCATGTGTTT--GTGGGTGGAAAAAAATTCAGTGGTTTTTTTTAAAAAA chr4 - 94230402 52943787 52943786 52944706 41285697 41285696 41286616 920 AAGGTCAA-TTTAAAAAAAATAAATGAATCTGGAATTATTTAATGTAGAGGTGAAATGAAGGTTGACAGTTT-CAACTTCTCAATTTGATTAT----ATGTTTGTAGAATGATGTTTAGAAGT---GTACTTTGTGATTTT--TCTTTTATTTATTTACAGTCTTATTTATGTTTTGTTTAATATA--GTTCAGTTCTGGCCATAA-AAATATTT--CATGTACGACACTATTGTGAAAAGTATTTGGAGCTGTCTGAATTCTT-GCCAGATTAGCTGTTTTTCCTCACGTGTTCAATAATTTTCAAAAAAAGTATTA-----TCATATATTTGTAAGCATGG--------AGTAAGGTCCAAATT--TAAGGATTGTTGGCCTTAGCTCACAAAA----CTCATTGCAAA----------------------ATGTGCCTCGGTTTCCAAATTGGTAAAGTTGA----------ACGTATTTATAGGCAGCTTTTAACAATTCTGCttttttt----------------tttaaaataa------atttaaatGATCTGACCTCAAAGCACTCAATAGAATAAGCTAGCACATACAAATAATCCTGTCAGTTTACAATTATAGCTATTACCC----AGAGCAGAATTTACTTTGCACAGCAGAGTGTAACAAATGCAAT---TAGTTCT--GTTTCCAGGTACCA--CTACCACTGCGGTTGCAGATATCAAAACCT-AAACATTACTGGTACAA---GAATATT--TAACCAAATGAGCAAAGGTTAGAAAAAATTGTAGTAGAACACAAATCAAATAAG----AATTTTTTTAAAATATTGCTATGTTTATGCTGTATTAAACATCAAATGCTCAGGACTGAACTAAATATTTAATCAGGTTATATGCTGAATGTGGTTCTGTTCTAATT----TTGTCTGTAAAAGTATGCAAATACATCACGTAGATTAACTTGTCTCTGCACTTTCCATGTGTTTCAGTGATTGGAAAATACATT-----TTTTTTTTAACAAA ........-.x.:...:.x.x..:.----------.................-..........x::.x....-..:.x...:.:.....::..----....:.:......x....x...xx..---....xx.x.x.....--..x............................:...........--...:::..........xx-........--..::x.x..x.....xx..:..--.....:x....x.x.:.:.::..-::.............xx:::.:xxxx:.x...x..x.....:.x..-......-----.x.x..x.x.x.x..xx...--------...x:x.x....:x.--.xxx.:......----..x:........----......x.x..----------------------..:.:x::.xx....:.x.:.xxx.....:::----------.:.....................:...::..::x.x...----------------..:.x.:.:.------....x...:.::...:.x....:.xx.--..:..---------..x...::...-----------....xx......:x..:..:::----.::.:........-..:......---:..:x..x:....:...---.......--:x..:x.:x..:..--x..::.:.:.::..x::x......:..:..-..:::....x.......---.......--..:........:.....x....xx...x:.x.-....x.::............:----........---:x.......x.:.:...::...x.....:......x...............x.................x..x.....::..x.......:.....----....:......x.................:..........x..:....................--...:x.......x.xx.:-----..........x... 8M1D16M10I17M1I19M1D20M4D26M3D15M2D43M2D18M1D8M2D22M2I23M1D46M1I6M5D20M8D15M2D12M4I12M4D11M22D32M10D39M16D10M6D27M2I5M9I11M11I22M4D13M1I9M3I17M3D7M2D14M2D30M1D17M3D7M2D32M1I21M4D8M3I96M4D64M2I18M5D14M 657/870 75.5% 920/94230402 0.0% 170/870 19.5% 130373725 59840830 +24583 chr4 + 190214555 183319573 183319572 183320470 898 TGTTTCTCGTCTCCAGTTCTTGATGATGATCTTGTGTTTGTGCCACTGCGTAGTGGCCCGAAGCTAGGGGAGCGTGGCTGGAGCAGGCTGCACAGTGGAGCAGACACCCTCCTAGCAGAAGAGAAAGTCCAGCAAACCAGCCCAGAAACAGGGCCTCCCCAAACTCCCACCTGGGGACAAAGTCTGGGACGTTCTCATCCCAGAACTCCTGAACCGTCTTGTGGGCAACCCAAGAGACGGGAACCAGGGCTGTGACTCCCGAGGCCCAGGACAGAATTCCTCCCAGGATCAGCAGTCGCCTCTTGAGATCT--CTCTG-ACTCTCTCCAATTCTCAAACAGTCCAGGCCAAACCCAGAGACCAGCAGGCCCAGAAATCCCAGCCCATTTGACAGAAACATTAAGATCCTGGAGACCCTGAGTTCAGCAGGCAAAGCCAGGAAGGAGTCAAAGTCCTTGCATTGCATCCCCACTTCCTCTTGGATGACACAGGTTTGCCAGAGTCCCATGGTCCAGTTTTCCATTTCATTTAAGTCCAGGTTGAGGTTCTTCCAGTGTGGCAGGTAGTTTGTAAGACAGGATAAAACCCATCCCAGCAAAGATAATGAAACTCCAGCTAGTTGAGCTACAGTTCTAAATACTAAAGCCATTATAATGTCCTGAGAGCTTTAGCCAAACTAACTCCTGCCCTTCGGTTGCTGTGAAAAGAAGTGTG----------ACACTTG----TGTTATAAC------TTATGAAACTCAGAAATATTTCTTCATTGTGTATATAGGAGGATTCTTGCCAGAGTTGCTATTGTTTGATTCCATGTTGAATGGGTTTCACAAAAGGATAGGGAAATAATGCCGCCAACCAGTAATGCCAAGGTGTGGCCAAGATTGTGTTTGTGTCCTGTGGGCTGGATT chr4 - 94230402 52945549 52945548 52946425 41283978 41283977 41284854 877 TGTTTCCAACCTCCACCTGTTGACGGTTGTCTTGCATATCTGCCATTGTATACTGTTCTGGTAATTGATGGTCAGATGAGAAGAACATTGTCAAGAGGAGTAGAGAGCCTCCTAGAATTATAAAAAAACCACCAAACCAACCACTGAACAGTGCATCCCCTATTTCCCATCTGGGCACGATCTCTGGGATCACTTCATCCCCAAATTCCTGGATTATCGTATAGGCAACCCAGGAAACAGGAACTAAGACCAGAACTCCAGATATCCACATGAGTATTCCTCCAAGTAGTAACAGCTGTTTCTTTAGCTTCTGCTCTGTATTCTCT---GTCTTTAGGCAGTCCAAACCAAGGCTAGAGATGACGAGGCTCAGAAGTCCTAGTCCGTTTGACGTAGATACTAAAATCCTGGAAATCCTGAATTCTATGGGCAAAGCTAGGAAAGAATCAAAGTCTTTACACTGTGTTCCTCCTACATCTTGGACTACACAGGTTTGCCAGAGTCCCATAGTCCACAGCTCCAGTTCATTTAAGTCTAAGCCGAGGTTTTTCCAGTCTGGTAAATAGTTACAGGTACCAGTTAAAATCCATCCTATTACAGACAGCAGCAATCCAAGTAACTGCAGCCTGTGTCTGTGGACCAAGTCCATTTTTA-------------TCAGTCAAAGTAGCACTGAACTGATTGTTTTTGAAGACAATACTCTGCACATACTGAACACTGGCAGATGTTAAAACAAAGCTTTATAAAGCAT-GAAATACTCCTCC--------------------CCCTCCAGC-TTAATGTTACCTGGTTCCATGTGCA--GCATTT----AGGGGATAAGGAAATAGCGTGGTAAACCACTAATTGAAGGGTGTGACCACAGCTGGGCTCACCTTTCATTAGTTGAGTT ......:x::.....x:.x....:.:.x:.....::.x.x.....:..::..x..x:.:.:x:x.x.:x.:x.:x:xxx.:..x.x::..:xx..x....:...x.x........x.xx.x.:...:x...x.......:..xxx:.....x..x.....x.x:.....:.....x..:.xx.......:xx::.......x:..:.....:.:::..x.:.:.........:..:..:.....:.:.:.::x:.....x..x::...x:xx..x........x..x.x:.:...::.::....x..x.::--.....-.:.....---:.::.:.::.......::....:x.:.....:x.xx....:.....:...:..:..:......:x.:.:.:...:........:.:.....:...x:::........:.....:..:........:..:..:..::.:..:x..x.x.......:x.......................:.....xxx:....x............:.:.::......:.......x...:.::.....xxx::x..x:.x.....:......:.x:.x...:.::::x.x....:x..::..x:x:x::xx...:x:x..:..:x.....x.x.-------------.:..:....x..:.x.:x:x.:xx:x...x:..x::.x.:x.x.x..----------.....x.----.....x...------....:..:.x:-......:.:..:.--------------------.::x....x-..:x.:..:::..:........xx.--.x:...----.::.....:.......::.:x.:x.....x....xxx.:......:...x:::..x.:.:::x.::::.x:.:..::.. 311M2I5M1I7M3D325M13D47M10I7M4I9M6I11M1D13M20D9M1D25M2D6M4D79M 546/854 63.9% 877/94230402 0.0% 67/854 7.8% 130374024 59840531 +34615 chr4 + 190214555 183319576 183319575 183320237 662 TTCTCGTCTCCAGTTCTTGATGATGATCTTGTGTTTGTGCCACTGCGTAGTGGCCCGAAGCTAGG-GGAGCGTGGCTGGAGCAGGCTGCACAGTGGAGCAGACACCCTCCTAGCAGAAGAGAAAGTCCAGCAAACCAGCCCAGAAACAGGGCCTCCCCAAACTCCCACCTGGGGACAAAGTCTGGGACGTTCTCATCCCAGAACTCCTGAACCGTCTTGTGGGCAACCCAAGAGACGGGAACCAGGGCTGTGACTCCCGAGGCCCAGGACAGAATTCCTCCCAGGATCAGCAGTCGCCTCTTGAGATCTCTCTGACTCTCTCCAATTCTCAAACAGTCCAGGCCAAACCCAGAGACCAGCAGGCCCAGAAATCCCAGCCCATTTGACAGAAACATTAAGATCCTGGAGACCCTGAGTTCAGCAGGCAAAGCCAGGAAGGAGTCAAAGTCCTTGCATTGCATCCCCACTTCCTCTTGGATGACACAGGTTTGCCAGAGTCCCATGGTCCAGTTTTCCATTTCATTTAAGTCCAGGTTGAGGTTCTTCCAGTGTGGCAGGTAGTTTGTAAGACAGGATAAAACCCATCCCAGCAAAGATAATGAAACTCCAGCTAGTTGAGCTACAGTTCTAAATACTAAAGCCATTATAAT----GTCCTGAGAGCTT chr4 - 94230402 52947412 52947411 52948077 41282326 41282325 41282991 666 TTTCAGTTTCCAAGTGTTGACACTGATCTTGCTGTTCTGTTACTGCGTAATGGACCGAAGATGGATGGAGTTCAGTTG-AGCAGGTTGTGCAATTAAGTAGGGATCCTCCTAGTATAAGACAAAATCCAGCGAGCCAGCCAACAAATAACGCTTCCCCCAAATCCCACCTGGGAACAATGTCTGGTATATTCTCATCCCAAAATTCCTGGACTGTGGAGTGGGCAACCCAAGAAACCGGGACAATAGCTGTAATCCCCGACATCCAGAAGAGCATTCCTCCAAACAGCAACAGCCGTTTCTTGTGATCCTGTTGTCTTTCACCAATTTTCAAACAGTCCAACCCAAATCCTGAGAACAGGAGGCCCAAAAGCCCCAGTCCATTGGAAAAAAACATCAAAATCCTAGAAATCCTGAGTTCTGGAGGCAAAGCTAAGAAAGAATCAAAGTCCTTGCATTGCATTCCCCCTTCTTCCTGAACAACACAAGCTTGCCAGAGTCCCATGGTCCAGATCTCCAGTTCGTTCAGTTCCAAGTTAAGATTTTTCCACTGAGGTAAATAGGTAGTGAGACAGGATAGGACCCATCCCAACAGAGATAATAACATGCCACTTAATTGCGCCACTGGTCGATAAACCAAGGCCATTGTAAGAGTAGTCCTAAAAGCTT ..::x..:....:x.x....::x........:xx..x..::........:...x......x.:.:-....:x::.:..-......:..::..:.x:..:..:x.:........:.x....x...:......:.:......x.x...:.:x..:.....x..x...........:....x......x.::...........:..:.....:..:..xxx...............:..x..:..x.x:.....:.::.....x::....:.x..x........x.:x.x..:...:..::.....x....::x:..x..:..x......:............:x.....:..x....x...x.......:..::.....:.....x..x.:......:..:.....:..:.:.........x.x.........:.:...:..:....................:...x....:..:..:.::.....:.:......................x.:....x...:..:.:x....:...:..:..:.....x..x..:.::...x.x..:..........::..........:..:.......:.x.:x...x:..:...x..:..x.x..x.x.x..:..:......:...x----.....:.:..... 65M1I12M1D571M4I13M 491/661 74.3% 666/94230402 0.0% 6/661 0.9% 130372164 59842391 +64607 chr4 + 190214555 183321664 183321663 183322948 1285 AGTGAATGAGAAAACGTGAGCATCACAGGTTTAGCTACAAAACAAAGAGGTCTTTGTCATCACAGTTGATACAGGATAC------------------------------------ATCTCTGGCCTTGTCGGAGTCTTACACTTGAGGATCTGCTGTCCCATCTTCCAGGTAGGGACACTGAGTTTGCATTTGCGCCACTGCATAGTGGCCCAAAGCTAGG-GGAGCGTGGCTGGAGCAGGCTGCGCAGTTGAGCAGACACCCTCCTAGCAGAAGAGAAAGTCCAGCAAACCAGCCCAGAAACAGGGCCTCCCCAAACTCCCACCTGGGGACAAAGTCTGGGACGTTCTCATCCCAGAACTCCTGAACCGTCTTGTGGGCAACCCAAGAGACGGGAACCAGGGCTGTGATTCCCGAGGCCCAGGACAGAATTCCTCCCAGAATGAGCAGTCGCCTCTTGAGATCTCTCTGACTCTCTCCAATTCTCAAACAGTCCAGGCCAAACCCAGAGACCAGCAGGCCCAGAAATCCCAGCCCATTTGACAGAAACATTAAGATCCTGGAGACCCTGAGTTCAGCAGGCAAAGCCAGGAAGGAGTCAAAGTCCTTGCATTGCATCCCCACTTCCTCTTGGATGACACAGGTTTGCCAGAGTCCCATGGTCCAGTTTTCCATTTCATTTAAGTCCAGGTTGAGGTTCTTCCAGTGTGGCAAATAAGTTGTAATAATGGATAAAATCCATCCCAGGAGAGATAGTAAAAGTCCAACAGATTGCATTGCTGTTCTAAAGATTAAAGCCATTGCGACAG--GTCTTAGGACTTTGC------------------CACCCCTATAGGATCTGCTGTCCTTTGTGGTTGACGGTAATGTGACAATCTTGGTTCTATGCTGCCTGGAATATAAGCTGTGGTCATTAACTCTTTGGGCACTCTGAAATGCGTTTTTGTTCTTCTTGAATATAATGTTTCACGTAAAGGACGAAGGACTCTGTTAAAACTATGAGTTGGGCTTTCTGATAAGGACTTGATCTGTTACCTTCCAAT----TTGGTAAAATTATATCCCCAATGCTTGATGATTATAAGTCTAAGGATGAACAAAGAGGGCTCTATGACCCCTCACCCTAAAATACAACAGAAATCTTTGTGCTTCAGTATGGATTAATTAGATTTTAAGTGGTGATAAAAGGCCAGCTCTTTCTACAACAGGACTTCATTGTAAGAGCTGAATCTGAAATTTCAGGGATGCAAAACAAGGTCTTGTAAAGAAAGGTAGACTGTTT-CCTATAATCTCTATTCTTCTCAGACTTCCTTAACCTACACAAGAGCCT chr4 - 94230402 52947260 52947259 52948596 41281807 41281806 41283143 1337 AGTTATGGAGAAAACATAAGT-TTAGGAAATCAGCTAAGTAACAAAGAATCCTTTG-AATTACTAGTGGAACAAGCTGCTGGCTTGCACTGGAGTTTGGAAAAAGATAGGGCAGTCTTTCTGTCCTACTTAAAACCTTTGGTTTTAAGGCCTA--GTTTCAGTTTCCAAGTGTTGACACTGATCTTGCTGTTCTGTTACTGCGTAATGGACCGAAGATGGATGGAGTTCAGTTG-AGCAGGTTGTGCAATTAAGTAGGGATCCTCCTAGTATAAGACAAAATCCAGCGAGCCAGCCAACAAATAACGCTTCCCCCAAATCCCACCTGGGAACAATGTCTGGTATATTCTCATCCCAAAATTCCTGGACTGTGGAGTGGGCAACCCAAGAAACCGGGACAATAGCTGTAATCCCCGACATCCAGAAGAGCATTCCTCCAAACAGCAACAGCCGTTTCTTGTGATCCTGTTGTCTTTCACCAATTTTCAAACAGTCCAACCCAAATCCTGAGAACAGGAGGCCCAAAAGCCCCAGTCCATTGGAAAAAAACATCAAAATCCTAGAAATCCTGAGTTCTGGAGGCAAAGCTAAGAAAGAATCAAAGTCCTTGCATTGCATTCCCCCTTCTTCCTGAACAACACAAGCTTGCCAGAGTCCCATGGTCCAGATCTCCAGTTCGTTCAGTTCCAAGTTAAGATTTTTCCACTGAGGTAAATAGGTAGTGAGACAGGATAGGACCCATCCCAACAGAGATAATAACATGCCACTTAATTGCGCCACTGGTCGATAAACCAAGGCCATTGTAAGAGTAGTCCTAAAAGCTTGCGGAAGAAGGTCGCCCCAGCAGTTCTGTAACAACTGCTGTCTCGAGTGGTGGTGGAAGCTATGATGATTTTAGTTCTCTGCTGCCCCAAATATAAGCCCTTGCTATTAACCCTTTGTAAGCTCTCAAACACTTTTTTGTTCTTCACGAATATAATGTTTCACATAAAGGACGGAGGACTTCACT-AAACCATGAGTTAGTCTTTCCGATAAGGATTTGATCTGCTACCTTCCAATTTGCTTGGTAAAATTATAT-CCCAATGCCTGATGATTACAAGCCTGAGGATGAACAAAGAAGGCTCTATGACCCCTCACCCTAAAATACAACAGAAATCTTTGTGCTTCGATACGGATTAATTAGATTTTAAGTGGTGATAAAAAGTCAGCTCTGTGCGCAACAGGACTTCATTGTAATAGCTAAATTTGAGATTTCAGGGATGTAAATCAAGGCCTTGTAAAGAAAGGTAGACTGTTTGCCTATAATCTTTATTCTT---AGACTTCCTCAACATACATAACGGCTT ...x.xx........:.:..:-.:.x:::x.:.....x:x........:x:.....-x..:..x:x..:x...:.x.:.------------------------------------x.:....x...xx.:::.::...xx::..x.:.::..:--..::..x:.....:..:xx........x:....xx..x:.::.....:..:...x..:...x.:.:-....:x::.:..-......:..:...:..:..:..:x.:........:.x....x...:......:.:......x.x...:.:x..:.....x..x...........:....x......x.::...........:..:.....:..:..xxx...............:..x..:..x.x:.....:..:.....x::....:.x..x........x.:x.xx.:...:..::.....x....::x:..x..:..x......:............:x.....:..x....x...x.......:..::.....:.....x..x.:......:..:.....:..:.:.........x.x.........:.:...:..:....................:...x....:..:..:.::.....:.:......................x.:....x...:..:.:x....:...:..:..:.....x..x..:.....:..x..:.x.xx.....::.:........:x.......:...x.xx...x:x:.....::::...x..x.x.:.::..:.......::.x..--...:..::.x:....------------------..x::..:..:x.x........::xx.....x.xx.:x:x.:...::..:..:.....x.......:x:.........:x.x.::......:.....x:x:....x...::.x............x:................:.........:......::::.-....:.......:.x.....:........:........:...........----...............-........:.........:...:..:..............:................................................::..:..............................:.:.......x.x::...................x....:...:...:............:...x.....:........................-..........:.......---.........:...x....:..x:..:. 21M1D34M1D22M36I38M2D66M1I12M1D573M2I15M18I165M1D50M4I15M1D219M1I18M3D27M 965/1275 75.7% 1337/94230402 0.0% 72/1275 5.6% 130374404 59840151 +23127 chr4 + 190214555 183321770 183321769 183322427 658 TTGAGGATCTGCTGTC-CCATCTTCCAGGTAGGGACACTGAGTTTGCATTTGCGCCACTGCATAGTGGCCCAAAGCTAGGGGAGCGTGGCTGGAGCAGGCTGCGCAGTTGAGCAGACACCCTCCTAGCAGAAGAGAAAGTCCAGCAAACCAGCCCAGAAACAGGGCCTCCCCAAACTCCCACCTGGGGACAAAGTCTGGGACGTTCTCATCCCAGAACTCCTGAACCGTCTTGTGGGCAACCCAAGAGACGGGAACCAGGGCTGTGATTCCCGAGGCCCAGGACAGAATTCCTCCCAGAATGAGCAGTCGCCTCTTGAGATCT--CTCTG-ACTCTCTCCAATTCTCAAACAGTCCAGGCCAAACCCAGAGACCAGCAGGCCCAGAAATCCCAGCCCATTTGACAGAAACATTAAGATCCTGGAGACCCTGAGTTCAGCAGGCAAAGCCAGGAAGGAGTCAAAGTCCTTGCATTGCATCCCCACTTCCTCTTGGATGACACAGGTTTGCCAGAGTCCCATGGTCCAGTTTTCCATTTCATTTAAGTCCAGGTTGAGGTTCTTCCAGTGTGGCAAATAAGTTGTAATAATGGATAAAATCCATCCCAGGAGAGATAGTAAAAGTCCAACAGATTGCATTGCTGT-TCTAAAGATTAAAGCCATT chr4 - 94230402 52945537 52945536 52946195 41284208 41284207 41284866 659 TTTAAAGTCTTCTGTTTCCAACCTCCACCTGTTGACGGTTGTCTTGCATATCTGCCATTGTATACTGTTCTGGTAATTGATGGTCAGATGAGAAGAACATTGTCAAGAGGAGTAGAGAGCCTCCTAGAATTATAAAAAAACCACCAAACCAACCACTGAACAGTGCATCCCCTATTTCCCATCTGGGCACGATCTCTGGGATCACTTCATCCCCAAATTCCTGGATTATCGTATAGGCAACCCAGGAAACAGGAACTAAGACCAGAACTCCAGATATCCACATGAGTATTCCTCCAAGTAGTAACAGCTGTTTCTTTAGCTTCTGCTCTGTATTCTCT---GTCTTTAGGCAGTCCAAACCAAGGCTAGAGATGACGAGGCTCAGAAGTCCTAGTCCGTTTGACGTAGATACTAAAATCCTGGAAATCCTGAATTCTATGGGCAAAGCTAGGAAAGAATCAAAGTCTTTACACTGTGTTCCTCCTACATCTTGGACTACACAGGTTTGCCAGAGTCCCATAGTCCACAGCTCCAGTTCATTTAAGTCTAAGCCGAGGTTTTTCCAGTCTGGTAAATAGTTACAGGTACCAGTTAAAATCCATCCTATTACAGACAGCAGCAATCCAAGTAACTGCAGC-CTGTGTCTGTGGACCAAGTCCATT ..x.:::...x....:-...x.:....xx.:xx...:x.x:x:......x.x:....:..:...x..x:.:::x:x.x.:x.:x.:x:xxx.:..x.x::..:xx..xx...:...x.x........x.xx.x.:...:x...x.......:..xxx:.....x..x.....x.x:.....:.....x..:.xx.......:xx::.......x:..:.....:.:::..x.:.:.........:..:..:.....:.:.:.::x:.:...x..x::...x:xx..x........x..x.xx.:...::.::....x..x.::--.....-.:.....---:.::.:.::.......::....:x.:.....:x.xx....:.....:...:..:..:......:x.:.:.:...:........:.:.....:...x:::........:.....:..:........:..:..:..::.:..:x..x.x.......:x.......................:.....xxx:....x............:.:.::......:.......x...:.....:x.xxx::..x::.x............:.xx.x...:..:.:x.:.....xx:.:....x:-....-...:x:..::..:x..... 16M1I306M2I5M1I7M3D297M1D4M1I19M 431/654 65.9% 659/94230402 0.0% 9/654 1.4% 130376233 59838322 +3109 chr4 + 190214555 183343551 183343550 183343655 105 CACTGCAACCTTCACCTCCCAGGTTCAAGCAATTCTCCTGTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCACCACACCTGGCTATTTTTTTTTTTTTT chr4 - 94230402 70368968 70368967 70369070 23861333 23861332 23861435 103 CAGTGCAATTTTAGCATG--AGATTCCAGCTTTTTGCAGGTTGACTTTCTTGGTGGCTTCTTTCACTGGTGTTAATCACCACACCTTGTTATTTTTTTTTTTCCT ..x.....::..x:.x.x--..:...x...xx..:x.xx..:::.:.:..x:..:...xxxx.:..x.....xx.:..........x.:.............::. 18M2D85M 67/103 65.0% 103/94230402 0.0% 2/103 1.9% 112974583 77239972 +6716 chr4 + 190214555 183369276 183369275 183369520 245 AGGCGGAAGAGCACTGAGAGGCCACTGCAGCTGGGTGAGTTTTGATGAGTGTGCA------CTGGGAGCAAGTCAGGTGGTGTTAGGGTTCTGACGAGGAG-GTGGGCTGTGAGGCTGGCCTGTCTTGAGGCTAGGGAAGAAT-----AAGGTAAAGGATGCTTTGATGTTTTTGTTTAAAGCTTTGGCTCGATAATTCAATAAGAAGATCCAT--TAACCCATGAAACTGTGAAAAGGTGTTTGGAGTAGAATAAAGT chr4 - 94230402 52960668 52960667 52960919 41269484 41269483 41269735 252 AGGCAGAAGAAAAAAAAAAGGCTAT----ACTGGATGAACATT--TTAGTGCACAGCACATTTAGGAATAAGTCTAGCAGCGTTAGTATTCTGATGAGGAAAGTGGTCCTAGGGGTTGATGCATCTTATGACTGTAGGAGAATTGATAGCAGAAGAGAATTCTTTGATGTTTT-ATTTAAAAGTTTTGCTCAATAATTCAATAAAGAGATCCATTATAAATCAGGAAAGAGTACAAACGTGCCACGAGTACAACCCAGT ....:.....:x.xx:.:....:.:----:....:...::x..--.x....::..------:.:...::.....x:.::.:.....x:......:.....:-....x.:xx.:..:..::x::....:x.:..:x:.:.....-----:x:.x.:..:..x............-:......:x...x....:............::........--...x:..x....xx..:x...x...::xx.....x..:xx... 25M4D14M2D10M6I40M1I41M5I25M1D40M2I43M 160/238 67.2% 252/94230402 0.0% 21/238 8.8% 130408608 59805947 +4543 chr4 + 190214555 183375883 183375882 183376044 162 TAATATATTACCTCGCTGTAAAGATGAACTCTGCTAGAGTCTAGGTCTTTAAACACAAATTAGCAG-GAGCTCCAGGGAAGGAAGAGATGTTCTGCTCTTAATGATCTTTTTAACACTAGCGGCAGGTCCTGAGAACCCCGCAGGGAATTCCTGGAACGTGTA chr4 - 94230402 52965988 52965987 52966140 41264263 41264262 41264415 153 TAATGTATTATCTTGCTGTAAATATTAACTTTGCAGCAGTTTAGAGCTCTAAAAGCAAATAAATGGAAAGCTTATGGGAGCATAAAGAGACCGTGCTCTTAATGATC---TTAATACTATC-------TTTCAGCACACCAATGGGAATTTTGGAGAGATGCA ....:.....:..:........x..x....:...x:x...:...:x..:....x:.....x.:::.-:....:xx....:x:x.:...x:::x..............---....:....x.-------::.x..x..x..:xx.......::x.::.x:..:. 66M1I40M3D11M7D35M 101/152 66.4% 153/94230402 0.0% 11/152 7.2% 130409895 59804660 +5273 chr4 + 190214555 183379714 183379713 183379818 105 TTACTCTTCTGCAGGTCAGAAATGTTCCCAGATGCTGCGGTCATTTCAGTTTGATTTCATTGGAGATACTCTGACTTGATGATGATATTAACATCACTGAATCCT chr4 - 94230402 93732732 93732731 93732835 497568 497567 497671 104 TTACTCCTCGGCGGTACAGAAGTTCTCCCAGACTCTGCAGTCCTTTCAGTTTGACTTCATTGGTGACACCCTAAC-AGATGATGAGATTAATATTGGTGAGTTTT ......:..x..:.xx.....:.x:.......:x....:...x...........:........x..:..:..:..-x........x.....:..::x...:.::. 75M1D29M 78/104 75.0% 104/94230402 0.0% 1/104 1.0% 89646982 NA +4262 chr4 + 190214555 183379878 183379877 183379943 66 ATGCTAGTGATTTTCTCATCAGACCCCTGGGAAGCTTCCAGAAGGAGCAAATAGGCTTCACGGAGG chr4 - 94230402 93737380 93737379 93737445 492958 492957 493023 66 ATGCCAGTGATTTGCTGATCAAACCTCTGGAAAATTTTCGGAAGGAGCAAATAGGGTTCACCAAGG ....:........x..x....:...:....:..::..:.:...............x.....x:... 66M 53/66 80.3% 66/94230402 0.0% 0/66 0.0% 89642498 NA +5074 chr4 + 190214555 183390616 183390615 183390807 192 TAAGACAGCATCAGTCCTTTTTCGCAGTGGTGATGTTATGGGCTCATATGTACCCTAAGTAATTACTCACTATTACTCC------TTCTTCGAAAGAAGGAGGAAACTACATTGCTGTTTCTTAAACAGCAGCCTTCCCTGTTAGATATCTGTGGAATATTATTTCTCCCCAGGTGCATTACCTTACATTAACCTATA chr4 - 94230402 52979912 52979911 52980092 41250311 41250310 41250491 181 TAAGAATGCATTTGACTTCTGCCCCAGTGTTG-CATTTTGAGTTCCTGACTGCAGTAATTAATTAAAAGCCATTGCTCCCAGACCTTCTTC----------------TCTATTACTGTTTTCTAAACGGCAGTGCCTGATTTTGTATATGTAATGATTATTATTTCTTCCCAGGTGTATTACCTTACGTTTATCTATA .....xx....:x.x.:.:.x:.x.....x..-::..x..:.:..x.:xx.:.xx...x......xxx:.:...:....------......----------------.x:...:......::.....:....:x:::xx.x..:x....x.:xx..x..........:........:..........:..x.:..... 32M1D46M6I6M16D91M 119/175 68.0% 181/94230402 0.0% 23/175 13.1% 130410704 59803851 +3344 chr4 + 190214555 183407701 183407700 183407820 120 TTGCTTTCTCTT-TTTCTTTCTTCTTGCTTTCTCTTTTTCTTTCTTCCTTCTCTTTCTTGCTTTCTCTCTTTTTTCTTTCTTCCTTCTTTCTTTCTTCTTTCTCCTCTTCCTTC---TTTCCTT chr4 - 94230402 70187554 70187553 70187677 24042726 24042725 24042849 124 TTGCTTTCCTTTGTTTGTTTCTGTATGTTTGTATGATTTCTGTTTGTCTCTTTTTCCTTGTTTTCTACCTTTTTTCTTTTACTACTTTTACTCTTTCACTCCTACTGTTGCCTAATGTTTCCTT ........::..-...x.....x:x..:..x:x:xx.....x.:.x:..::.:..:....:.....x:...........:x::x:.:..x..:.:.:x:.:..x..x..x.:.x---....... 12M1I101M3I7M 77/120 64.2% 124/94230402 0.0% 4/120 3.3% 113220147 76994408 +3592 chr4 + 190214555 183407725 183407724 183407822 98 TGCTTTCTCTTTTTCTTTCTTCCTTCTCTTTCTTGCTTTCTCTCTTTTTTCTTTCTTCCTT------CTTTCTTTCTTCTTTCTCCTCTTCCTTCTTTCCTTTC chr4 - 94230402 87765869 87765868 87765972 6464431 6464430 6464534 104 TGCTTTCAGCATTTACCTTCTATTTCTCTTTTTTGCTTTTTCTCTTTTATTTTTCCTCCCTGAACACTTTTATGCCTTCATTCTTCACTCCTTACACTCACTTC .......xx:x...x::.::.x:........:.......:........x.:....:...:.------:...x.x:....x....:.x..:.:.x.x:..x:... 61M6I37M 67/98 68.4% 104/94230402 0.0% 6/98 6.1% 95641856 NA +4555 chr4 + 190214555 183407788 183407787 183407955 168 TTCTTTCTTCTTTCTCCTCTTCCTTCTTTCCTTTCCTTCCTTCCTTTCTTTCTTTTCTTTCATTCTTT-CCTTCCTTCCTTTCCTCTTTCTTTCTCTTTCTTCTTTCTTCCTCTC-CTTTTTTTCTTTCTTTTCTTCTTTCTCTTCTTCCTTCTTTCCCTTCCTTCCTCT chr4 - 94230402 45185583 45185582 45185751 49044652 49044651 49044820 169 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATT-CTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT ..x..x..:x...::.........xx.:..xx..:::.x....x..-.................:..:-....:....:..:::.xx:....:.::..:::x...xx.x.:....-..x:..x.......xx:.x:.::.xx::....x:.::....:...:xx..:.:. 46M1D21M1I46M1I54M 106/167 63.5% 169/94230402 0.0% 3/167 1.8% 138222205 51992350 +4488 chr4 + 190214555 183407847 183407846 183408011 165 TCATTCTTTCCTTCCTTCCTTTCCTCTTTCTTTCTCTTTCTTCTTTCTTCCTCTCCTTTT-TTTCTTTCTTTTCTTCTTTCTCT---TCTTCCTTCTTTCCCTTCCTTCCTCTCTCTCTTTCTCTTTCTTTCCTTCCTGCCTTTTTCCTTCCTTCCCTTTCCTTCCTTT chr4 - 94230402 45185583 45185582 45185751 49044652 49044651 49044820 169 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTTT .:...x:.:x:..:.:::...:.:xx.:..xx.:.::.x....x.....:..:.:....:-...:.:x.:............:.---......:.:.:..x...xx.x.:....x..x:..x.......xx..x:..:xxx.:.:.:x...:..:.::..:xx..:... 60M1I23M3I82M 102/165 61.8% 169/94230402 0.0% 4/165 2.4% 138222264 51992291 +3039 chr4 + 190214555 183407862 183407861 183407943 82 TTCCTTTCCTCTTTCT-TTCTCTTTCTTCTTTCTTCCTCTCCTTTTTTTCTTTCTTTTCTTCTTTCTCTTCTTCCTTCTTTCC chr4 - 94230402 8439379 8439378 8439461 85790942 85790941 85791024 83 TTTCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTTTTAATCTAGTCTTCTCTTC ..:..::..x:x....-.....::.:.x.:::.:...:...:.....:.:...:...........:xx.::xx:.....:.:. 16M1I66M 53/82 64.6% 83/94230402 0.0% 1/82 1.2% 174968483 15246072 +3915 chr4 + 190214555 183407881 183407880 183408010 130 TCTTTCTTCTTTCTTCCTCTCCTT----------TTTTTCTTTCTTTTCTTCTTTCTCTTCTTCCTTCTTTCCCTTCCTTCCTCTCTCTCTTTCTCTTTCTTTCCTT------CCTGCCTTTTTCCTTCCTTCCCTTTCCTTCCTT chr4 - 94230402 4731651 4731650 4731796 89498607 89498606 89498752 146 TCCTTGCTCTTTGTTCTCCTCTGTAAGACTCTAATTAATCTTTCCTCTACCTATCTTCTTTTTCTTTCATTCATCTGCTCCCTCCCTATTTGCTTTTTGCTCTTCTTAATCCTCCTGCATTTTTATTCCCTTCCATTTCTTTTCCT ..:..x:.....x...::...:x.----------..xx......:.:.x:::x.::....:...:...x...x::.x..:....:..x.:.x::.:..x..:.:...------.....x.....x:.:......x....:..:.:. 24M10I73M6I33M 85/130 65.4% 146/94230402 0.0% 16/130 12.3% 178676230 11538325 +3206 chr4 + 190214555 183407938 183407937 183408019 82 CTTTCCCTTCCTTCCTCTCTCTCTTTCTCTTTCTTTCCTTCCTGCCTTTTTCCTTCCTTCCCTTTCCTTCCTTTCTTTTTCT chr4 - 94230402 8141239 8141238 8141320 86089083 86089082 86089164 82 CCCTTCCACCTTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT .::.:..x:.:..x..x...........:x...x....::.:xx.:.....::..::......x:x...::.::...:.:.. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 175266699 14947856 +4081 chr4 + 190214555 183407966 183407965 183408080 115 CTTTCTTTCCTTCCTGCCTTTTTCCTTCCTTCCC-------TTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCATTTTTTTCTCTCCCTTTCTTTTCTTTTCTTTTTTTTTTTGAGTTTTTAA chr4 - 94230402 28459092 28459091 28459213 65771190 65771189 65771311 122 CTTTCTGTACTCCTTGCTTGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTCTCTTTTTTTCCTCAGTCTTCTAA ......x.x..:.:...:.x..::..:......:-------.:.x:..:.x:...xx.....::..:..:.x......x.x::.::..:......x..:.........::.:::x:..:... 34M7I81M 75/115 65.2% 122/94230402 0.0% 7/115 6.1% 154948874 35265681 +3060 chr4 + 190214555 183407975 183407974 183408069 95 CTTCCTGCCTTTTTCCTTCCTTCCCTTTCCTTCCTTTCTTTTTCTTTCTTTCTTTCATTTTTTTCTCTCCCTTTCTTTTCTTTT---CTTTTTTTTTT chr4 - 94230402 45185582 45185581 45185679 49044724 49044723 49044821 98 CTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTT ...x:...::x...:.:::.....:xx..::xx:.....x:...x..........:x...:x..:.::x........:.:.:..---..:..:::... 84M3I11M 60/95 63.2% 98/94230402 0.0% 3/95 3.2% 138222393 51992162 +3056 chr4 + 190214555 183419632 183419631 183419683 52 TCTCCTCCTCCCCCACCACCTCTTCCTCCTCCTTCACTTCCTCCCTCTCTTC chr4 - 94230402 53066148 53066147 53066199 41164204 41164203 41164255 52 TTTCTTCTTCCCCCACTACCCTTCCCTCCTCCCCTTCACCCTTCCTCTCTTC .:..:..:........:...::.:........:::x.x:...:......... 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 130353484 59861071 +3032 chr4 + 190214555 183427273 183427272 183427344 72 CTGCAACCTCTGCTTCCCAGGTTCGAGCAATTCTCCTGACTCAGCCTCCTGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x:.:.::.....:..::x...x.xx.:........::::...........:....x.... 72M 47/72 65.3% 72/94230402 0.0% 0/72 0.0% 165230147 24984408 +3564 chr4 + 190214555 183430274 183430273 183430357 84 ATGCACTGCAGCCTCGACCACCTGGGCTCAAGCGATCCTCTCACCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGTATGCCAC chr4 - 94230402 18197121 18197120 18197202 76033201 76033200 76033282 82 ATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...:x..:.....:x:.x.x:.....:.....:.x.:.x.xx:x........:..:.........:......--...:::.... 72M2D10M 58/82 70.7% 82/94230402 0.0% 2/82 2.4% 165233153 24981402 +3189 chr4 + 190214555 183431419 183431418 183431465 47 ATAAAATTGCATTTCTCTCTCTCTTTTTCTTTTCTTTTCTTTTTTTT chr4 - 94230402 18929901 18929900 18929947 75300456 75300455 75300502 47 ATGATACTGAATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ..:.x.:..x..............:.:......:....:........ 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 164501518 25713037 +4131 chr4 + 190214555 183431526 183431525 183431599 74 CTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACACGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:.:...........x...x.xx.x........::...........:.:......:.... 74M 56/74 75.7% 74/94230402 0.0% 0/74 0.0% 165234400 24980155 +13485 chr4 + 190214555 183434952 183434951 183435244 293 TGCTGGTAGGTTTCACCCTGTGTTTTCAGTATTGTCTTGTCAAGAGCAGTTATTATCAAGTCCCAAATGAGCCTGGCAGTACAACCCTCAATAAGGTGTTTAAAACTGCCTTCCCTAGTGAGAAATAAAACACTGCTTTTGTTCTCGTTTTTAAAATTGACTGCATAGTATTACCACTATCAATGAGGTGTTTAACATCAAAATTGTCTTCCCTGGTGGGAAGAAAAACGTTTACTTTGTTTCCTTTCTTAAAATTAATTGAGGTTTTTAAAAACTTATCCTTATTCAACCAA chr4 - 94230402 52990402 52990401 52990685 41239718 41239717 41240001 284 TGCTGGTATGATTCACCTTGAGATTTTAGTTGTATCTTGCCAAAAGAAGCTATTATCAAGCCCCAAAAGACTGTAACAACACTACTATCAATGTGGTATTTAGAAGATCCTTCCCTGGTGGGAACAAAAACGTCTCTTTTCTTC-CAATCTTAAAATTAAATGCACAGTATTAGCACCATCAATGAGGTGTTTAACTTCAAAATTGCCTTTCCTGGTGAGAACGAAAACACT--ACTTGTTTCCTTTTTTAAAATTAACAGCAGTGTTT------TTCTCTCTTTTCTACTAA ........x.x......:..x.x...:...xx.:.....:...:..x..:..........:......x..x:x.::..::..x..:x.....:x...:....:..xxx........:...:...xx.....:::x.....x...-.:x.:........:.x....:.......x...:..................x.........:...:.......:...x:.....::.--x:...........:..........:x.x:..x...------..x..::.x...x..:.. 144M1D87M2D35M6D18M 213/284 75.0% 284/94230402 0.0% 9/284 3.2% 130444550 59770005 +3177 chr4 + 190214555 183437179 183437178 183437246 68 AGAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAACAAAAATTTAATCAGAGGAAA chr4 - 94230402 61919701 61919700 61919768 32310635 32310634 32310702 68 AGAGAAAAAAAAAATGTCTCCAAAAGAAAAAGAAAAATGGAGGGAAAAAAAAATAGAATCAAAGGAAA .....:x..:.xxx......x....:.....:.....x:..::::..x......xx.....:...... 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 121517478 68697077 +3177 chr4 + 190214555 183437194 183437193 183437237 44 GTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAACAAAAATTTAAT chr4 - 94230402 34847726 34847725 34847769 59382634 59382633 59382677 44 GTTTTAAAGGAAAAAAAAAAAAGAAAAAAGAACAGAAATTTAAT ..:.:...::............:.:.........:......... 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 148589468 41625087 +8338 chr4 + 190214555 183444477 183444476 183445076 600 CCTCACCCCCGGGGTGCCCT--CCGTGGCCTCACGGGGACGCAGCGTCGCAGCGGCCCCG-GCGCCGCAAAGCGTCTTGGGAGCGCCGGCTCGCGCCGGAAGAACGCGAG-GGCGCGCGGCGGCGGCGAGGTTATAAAAGGGAAGAAGCCGGCGGTGGGCGGAAGTGGGCGGTTCGGCGGCTCTGGGCGCTGTTGTTTGGTCTTTAGGCCTGCGGAGGGGCGTTATCTGGAGGGCCGCGGGTGCAGGCCGCAGTGACAGGGCCGCTCGCCCCGCTAGTCCTGCCTGTCTCCCGGTGCAGCTGTGTTCGCGGCCTGCAGGCCCAAC-ATGGCG--CAGGA-GGTGTCGGAGTACCTGAGCCAGAACCCGCGGGTGGCAGCCTGGGTGGAGGCGCTGCGCTGCGACGGCGAGACTGACAAACACTGGCGCCACCGCCGGGATTTTTTGCTTCGCAACGCCGGGGACCTGGCCCCCGCTGGCGGCGCTGCCTCCGCTAGCACGGATGAAGCTGCCGACGCCGAGAGCGGGACCCGAAACCGGCAGCTGCAGCAGCTCATCTCCTTTTCCATGGCCTGGGCGAACCACGTCTTCCTCGGGTGCCGGTGAGTG chr4 - 94230402 52992680 52992679 52993123 41237280 41237279 41237723 444 CCCCGCCCACGCGGCGCCCCGGCCGT-------TAGAGCCGTTGGGGCGGGGCCGCCCCTCGCGCCGCAACGCAGCCTGGG------------------------GCGAGCGGCGCGCGCCGGTTGTGAGGTCAT--------------CGCGCGCGGCCGGAAG-GAGCTGAGCGGTCGCC----GAGCCGTTGTT------------ccgccgcggggc-----ctggcgaggcgagcgggcggg-------ggcggagcgg---gccccgc---------------------------------gcgggcggAAGGAGCGGCCATGGTGAGCAAGACGGCGGCCGAGCCCCTGGGGCGGACGGAGGAAGAGGTCGCTTGGGCGGAGGCGCTGCGCGGGGCCTGCGAGCCCGAGCACCACTGGCGGTACCGGCGCGAGTTCCTGCTGCGCAATGTGGGCGAGC-------CGCCGGCGGCG--------------------------GGCAGCGCCGAG---------------------CTGCGGCGCCTCGTCTCTCTCTCCATGGTGTGGGCCAACCACGTCTTCCTGGGATGCCGGTGAGTG ..:.:...x..x..:....:--....-------::.:.x..:x.x.x..x:..x.....x-.........x..:x.:....------------------------.....-........x...:x.:.....:..--------------..xxx.:..x......-.:..x.xx...:x..:----.x..:......------------.:..x.x.....-----....x.:.x..x.x.x..:..-------.:.:.:..x.---.......---------------------------------....x.x.x...xx.::.-....:.--..:..-..:.x.x...:x....:.x.:..xxxx.x::.x..:x..:....:.............x.x.x.x.....x.:..xx.x........x:....x..x..x..::....x.....:.:x..x..x.-------...:.......--------------------------.x.::.......---------------------....:..:x...:....::.:.......:x.....x..............x..:............ 20M2I4M7D27M1I20M24D5M1I24M14D16M1D16M4D11M12D12M5D21M7D10M3D7M33D18M1I6M2I5M1I125M7D11M26D12M21D66M 314/436 72.0% 444/94230402 0.0% 172/436 39.4% 130451797 59762758 +10855 chr4 + 190214555 183445532 183445531 183445709 178 CAGATACCCTCAAAAAGTTATGGATAAAATACTTAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAACCTATACAACAAGAGATGAACTGGTTGCCAAGGTGAAGAAAAGAGGGATATCGAGTAGCAATGGTTAGCAGATCATAGATGTGAACATACATAGGAGTTTAGAGCAT chr4 - 94230402 52993227 52993226 52993404 41236999 41236998 41237176 178 CAGGTACCCTCCTCAGGTCACGGAGAAGGCGCTGGAAATGGCCGAAGGCATCCAAGTGACCGGCGCGCCCGTCCGCACCACGAGAGATGAACTGGTTGCCAAGGTGAAGAAAAGAGGCATATCAAGTAGCAATGGTTAGCAGATCATAGCTGTGACAATACATAGGAGTCTAGAATAT ...:.......xxx.:..:.:...x..::::..x::x.....:.........x.......x.::..x..x::.:::..x..:...................................x.....:.........................x.....xx............:....::.. 178M 140/178 78.7% 178/94230402 0.0% 0/178 0.0% 130452305 59762250 +44835 chr4 + 190214555 183446685 183446684 183448144 1460 CTAAAAACAGTTCCTCATCAGGCACATCCTTACTGACTCCCAAGAGCAGCTCTTCAACAAATACATCGCTGCTAACTTCCAAGAGCACTTCCCAGGTAGCTGCATCACTACTAGCTTCCAAGAGCAGCTCCCAGACCAGTGGATCTCTGGTTTCCAAAAGCACT--TCCTTAGCAAGTGTGTCCCAGTTGGCTTCTAAGAGTAGTTCTCAGACTAGCAC---CTCACAGTTGCCTTCTAAAAGTACTTCACAGTCAAGTGAGAGTTCTGTCAAATTCTCTTGCAA---GTTAACCAATGAAGATGTGAAACAGAAGCAACCTTTTTTCAATAGACTATATAAAACGGTGGCATGGAAGTTGGTAGCTGTTGGTGGCTTTAGTCCCAATGTGAATCATGGAGAGCTCCTAAATGCAGCTATTGAGGCTCTGAAAGCAACACTGGATGTATTTTTTGTCCCACTAAAAGAATTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTTTGTGAATTGAGGTGCAAGTCTGTGTATTTGGGCACTGGCTGTGGAAAAAGCAAAGAAAATGCAAAAGCAGTTGCATCAAGAGAAGCATTGAAGTTATTTCTCAAGAAAAAGGTGGTGGTAAAAATATGTAAAAGGAAATACAGAGGCAGTGAAATAGAAGATCTAGTACTCCTTGATGAAGAATCGAGGCCTGTAAACTTACCTCCAGCACTAAAACATCCTCAAGAATTACTATAATGTGTCCAAAATATCACTG--CATACAATATCTGGTATTTGAAGAGAAAAACTG------ACTTTTGTATAGTATAAAACACAGGCTTTCACAAATTTTGTATTGCTTTTTTTCCAGTTTTGCAGAAAATTTACATTCTAGTTCTCTTCACACAGTAGCAGTTGTAAATAATTTATGA---ATGAC-AGTACACATTAAAAGGTATGCATTAGCA----GCATATTAGTATGCTGTTTTATTTGCTGAAGAAAATACTGTC---TTCTATTTTTAATGA--TACATTAGGTACGATGTGTAGTTCGGTAGAGTCCTAAAATTTTTGTACTACTTTCAATTTGGTGAAAATGTATTAAGTTGTCTACCATGTTTTCTTTTCTAGCTGAATAAACCACATCAAAGGAA---------AGGGACCACAGTATTTGAATGTTTGAAAGTCTGT--AAAGCTTAAG-------------------GTTTTAAAAATGTTGCCCGTAATGTTGAACGTGTCTGTTAAAA--AATAAAAGAAAAAATAGTTGCTTCAAACTATTTTTATGAGAAGTTGTAAGCATTTTTTAGATATAA-------------------------------AGCAGTATAAAGTACTTGTTATTTTACTCTGA-----AGTTGTTTAA-----AATTCACCATGACTTTGACCGCTGAAGATTCTTTAAGCGGG-TTAATTTATGTTTTGAGGTGGAATACAATTTACACTTTTTTCTTAAAAACATGAATGTGGGTTTCTATATTAAGCATATTTTGTGACTACTATTAA chr4 - 94230402 52995058 52995057 52996549 41233854 41233853 41235345 1492 CTAAGGGCACTGCCAAAGCGGGTTCCTCGCTCCTGGCCTCTAAGAGCAGCGCGGAAGTGGCTGCCTCGTTGCTGGCTGCGCGGAGCGGCGCGCAGCAGGGTGCCTCACTGCTGACCTCCAAGAGCAGCGCTCAGGCGGCGGCATCGCTGCTGGCCGCTCGGAGTGGTGCACAGCAAG---GTCCC--------TCCCGCAGCGGGGCTCAGGCTGCCAAGAGTTCACAGCTTGCTTCCAAGAGTGGTTCACAGGCCAGCGAAGGCCCCGCTAAAGCTCTGTGCAAACCGTTAACCAGTGAAGACGCAAAGGAAAGACAGCCTTTTTTCAACAGACTGTATAAGGCTGTAGCATGGAAACTGGTTGCTGTGGGAGGCTTCAGCCCTAATGTAAATCACGCGGAACTTCTTAACTCATCTATCCAGTCTGTAAAAGCTACGTTAGATGTTGCTTTTGTTCCCCTGAAGGAACTTGCAGACTTACCTCAAAATAAGAGCTCTCTAGAGAATATAGTTTGTGAACTGAGGTGCAAGTCTGTGTATTTGGGTACTGGCTGTGGTAAAAACATGGAAAACGCCAAAGCAGTTGCTTCAAGAGAAGCTTTGAAATTGTTCCTCAAGAAGAAAGTTATTGTGAAGATCTGTAAAAGGAAGTACAAAGGTAGCGAAATTGAAGATTTGGTACTTCTGGATGAAGAATCGAAACCCTCAAATTTACCTCCAGCTTTATTAAATCCTCGGGAGATCATATAGGGGG-----AGGATTGCTGTTTGTACTGTGTATAGCATTTCGACACGAGGACTGAAGGTTAATTTTGTACTTTA-AAAATGTAGGCTTCCAGATATTTTGTATTTCTTTCT---CAGTTTTGCAAGACA-----ACTCTATTTCT-TTCACTTGGTAGCAATTGTATGAAACTTGTTAGAGATGACAAGTGTGGATTTAAAGGTATGCCTTAATACATGGCACACTAGTGTGCTCTTTTATTTGCAAAATAGTCTACCTACTTGTTCTATTTTTAATTAACTGGTTAAGGTACAACTTGCTGTTT----AAAACCTGACAATTTTGTAATTACTATGATACGGTGGCAGTGTGCTGAGTTGTCTGCCATGTCTTTTTT------------AGCCACAT---AGGAGTGTGTATGTAGGGACCATAATACTTGAATGATTGAAAGTTGTTTAGAAACTTCAGTCGAGAAGTTGAGTCATCCATTTCAGATGTATTGTTCATAGTGTTCA------CTGTTGATATTACTAGGAGAGAAAAGAGTTGGTT--GACTATTTCTATGAGACCTTGTAAAA---TTTGCAATATAAATGACACCCTGATCCGATTTAATGTTACACTAGCAGTGTAGATCCCATTTAACATTACACTAGCAAATAACCAATTAGCAGTCGAGTCACAGCTACTTCAGCCACT-AAAACTCTGTAAGTAGACCTAATTTATATT-----GTGAAAAATCCTTTGCAGTTTTTTC------AAATAAACATGGATTTCTATACTAAGAATCTT---TGACTGCTACTGA ....:::..x.x..xx.x.:..:x.x..x:.x...:.::.:.........x.xxx.::::x.:.x...:....::..x.xx:....:x:x.x...xx:.x...x.....:..::.:............x.:...:.x:xx.x...x...x.xx..:xxx.x.x.--.x.x:......---.....--------..:x:x..::.xx.....:..:x..x---:......:.xx....:..:...:x.......x.x..:..::.::.:.::...x::::x.....---........:......:.::..:x.:.::..:...........:.....:.....::.x..:........::....x.....x..x.....:..:..:.....:.....:.x:..:..:..x..:x..x....:x..x..x.:.....x..::.:.....xx:......:..x..:..:...:.x.....::.:...................x...:.:...x.........:.........................:...........x....:..x:.....:..x...........x...........x.....:..:..:........:..:..x:.x..:..:..x...........:....:...:..:.....x......:.:.....:..x.............::..:x:...:...........x:..xx.x......::..:x.xx....:x.x.-----.:x..::...--::...x:.:.x.:.:....x:.x.x:.::....------.x.......:xx..-....:::......:..x.x..........x....:.---..........::.x.-----.:....x....-.....x::......:.....x:x..:..:.x.---.....-...:::x...x..........x...::.----...:.:....:....x..........x:..x.:xx...:xx.---.............x.--.:xx.x......:.:x..:x...:----:.:x...:.x.x.......x.xx:.x::..x:....:x.:...::.:........:......:..:...------------.:......---....:---------........:.:..:.......x........:xx.--:..:...x..-------------------:...:.:.x:.:...::.:..:....x.------.....:.x.--.x..::...:....x.....x..--:.......:.......xx......:x---...xx:......-------------------------------......:..:.x:x.x.x.x.:x....x..::-----.::::x...:-----:.x....x::x....:::..:..-..:.:...x....::.:-:........:..-----...:..x.:xx...:..x.......------.x..:..::...:........:....x..x..---.....:...:.:. 164M2I11M3D5M8D26M3I63M3I467M5D10M2I33M6I14M1D36M3D15M5D11M1D32M3I5M1I28M4I42M3I15M2I24M4D69M12D8M3D5M9I34M2I10M19I28M6D9M2I23M2D26M3D12M31I32M5I10M5I23M1D17M1I12M5D25M6D32M3D13M 975/1389 70.2% 1492/94230402 0.0% 174/1389 12.5% 130451627 59762928 +3411 chr4 + 190214555 183450555 183450554 183450654 100 CCATCCAGTTAGAACCATTTCTTACTAC--CAACTTTAATTTTAATATCTCTCGAT----------------TTTCCTCCTTTTGTTTTTGTTTTGTTTTTTTGTTTGTTTTTTTTTT chr4 - 94230402 56516880 56516879 56516997 37713406 37713405 37713523 118 CCATTCCATTTTTACTATTCCTTATCACGGCTATTTTCATTTATATATTTTTTGACAAGTAACCAATCCATCTAATATCTCTTTGTTTTGGTTTTGTTTTCCTGTTTGTTTTTTTTTT ....:.x:..xxx..:...:....::..--.x.:...x....xx....:.:.:..:----------------.xx:x..::........x..........::................ 28M2I26M16I46M 72/100 72.0% 118/94230402 0.0% 18/100 18.0% 126933675 63280880 +3297 chr4 + 190214555 183489860 183489859 183489933 74 TTTTCAATGGTTTGGCTCTGTTTTGTTTTTGTTTGTTTTTTGTTTTTGTTTCTGAGATGGAAGTCTTGCTATGT chr4 - 94230402 32446018 32446017 32446091 61784312 61784311 61784385 74 TCTCCAAGTGATTAACTTTGAGTTGTTGTTGTTTGTGTTTTGTGTTTGTTTTTAAAGTAGGACTGCTGCTATGT .:.:...xx.x..::..:..xx.....x........x......x.......:.:.::.:.:.x.x:........ 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 151043842 39170713 +3297 chr4 + 190214555 183489860 183489859 183489933 74 TTTTCAATGGTTTGGCTCTGTTTTGTTTTTGTTTGTTTTTTGTTTTTGTTTCTGAGATGGAAGTCTTGCTATGT chr4 - 94230402 32437743 32437742 32437816 61792587 61792586 61792660 74 TCTCCAAGTGATTAACTTTGAGTTGTTGTTGTTTGTGTTTTGTGTTTGTTTTTAAAGTAGGACTGCTGCTATGT .:.:...xx.x..::..:..xx.....x........x......x.......:.:.::.:.:.x.x:........ 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 151052117 39162438 +3703 chr4 + 190214555 183489945 183489944 183490021 77 GTCTCAAACTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACGCCACTGT chr4 - 94230402 18197131 18197130 18197205 76033198 76033197 76033272 75 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTGT .:.:x..:..:.....:.......x.:.x.xx:x........::::.........:......x.....--....... 68M2D7M 56/75 74.7% 75/94230402 0.0% 2/75 2.7% 165292814 24921741 +3360 chr4 + 190214555 183496949 183496948 183497038 90 TATATATACACACACACACACATACACACATATATATATGCACACACATACACACACACACACACTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 66904848 66904847 66904937 27325466 27325465 27325555 90 TATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCTCAGCTCTAAATGAGAAAG .....:...::.........:.:.......:....x..x.:x..x:::..:...xx..:..:..:..::.:.:xx:.:.xxx.....x.. 90M 58/90 64.4% 90/94230402 0.0% 0/90 0.0% 116592101 73622454 +3082 chr4 + 190214555 183496950 183496949 183497022 73 ATATATACACACACACACACATACACACATATATATATGCACACACATACACACACACACACACTTTTTTTTT chr4 - 94230402 66904847 66904846 66904919 27325484 27325483 27325556 73 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCATTTCCTCT ......::..::.................:.:....x.:x::x..x:.::.:...xx..:..:.x...::.:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 116592103 73622452 +3020 chr4 + 190214555 183500370 183500369 183500413 44 GATATTTTCTTAACTTTGTCCTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 13493062 13493061 13493105 80737298 80737297 80737341 44 GATGTTTACTTGGTTTTGTCCTTTTTTTTTTTTTTTTTTTGCTT ...:...x...:::..........................x:.. 44M 37/44 84.1% 44/94230402 0.0% 0/44 0.0% 170007308 20207247 +51610 chr4 + 190214555 183510223 183510222 183511156 934 GGAAATGT-----TGTGTCTGCTAACACATGATAACGTTCTCATTTTTCTTTTCCTTTTTTTAGAAACGTTAAAGGAAATTGATGATGTCTACGAAAAATATAAGAAAGAAGATGATTTAAACCAGAAGAAACGTCTACAGCAGCTTCTCCAGAGAGCACTAATTAATAGTCAAGAATTGGGAGATGAAAAAATACAGATTGTTACACAAATGCTCGAATTGGTGGAAAATCGGGCAAGACAAATGGAGTTACACTCACAGTGTTTCCAAGATCCTGCTGAAAGTGAACGAGCCTC-AGATAAAGCAAAGATGGATTCCAGCCAACCAGAAAGATCTTCAAGAAGACCCCGCAGGCAGCGGACCAGTGAAAGCCGTGATTTATGTCACATGGCAAATGGGATTGAAGACTGTGATGATCAGCCACCTAAAGAAAAGAAATCCAAGTCAGCAAAGAAAAAGAAACGCTCCAAGGCCAAGCAGGAAAGGGAAGCTTCACCTGTTGAGTTTGCAATAGATCCTAATGAACCTACATACTGCTTATGCAACCAAGTGTCTTATGGGGAGATGATAGGATGTGACAATGAACAGTGTCCAATTGAATGGTTTCACTTTTCATGTGTTTCACTTACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGGGGAGATAATGAGAAAACAATGGACAAAAGTACTGAAAAGACAAAAAAGGATAGAAGATCGAGGTAGTAAAGGCCATCCACATTTTAAAGGGTTATTTGTCTTTTATATAATTCGTTTGCTTTCAGAAAA---TGTTTTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTAATGGTGTATTAAAAGTTGTTGTACTTTGTCTGTGA-CCTTAATTTTCTGCACTGAGTTACCAAATATTTCCAACCAGGTAGTCTTCAGA chr4 - 94230402 53005325 53005324 53006258 41224145 41224144 41225078 934 GGAAATGCAGAAATGCACCTTCTATCTCGTGTAATTATTCGTATTATGTT----CGTTTTGTAGAAGCTTTAAAGGAAATAGACGACGTCTATGAAAAATACAAGTCTGAGAACGATCCTGCTCAGAAGAAACGCTTGCAGCAGCACCTCCAGCGGGCTTTAATCAACAGTCAAGAACTCGGAGATGAGAAAATTCAGATAGTTACTCAGATGCTGGAACTGGTAGAGAATAGAGCCCGACAGATGGAAACACACTCTCAGTGTTTTCAGGATCTGTCTGAAAACGA-CAAGCCTCTGGAAAAGGCCAAGATGGAGTCCTGCCAGCCAGAGAGATCATCACGTAGACCTCGTCGGCAGCGAACCAGCGAGAGCCGCGACCTGTGCCATATAGCCAACGGGATCGATGACTGCGACGATCAGCCACCTAAAGAGAAAAGATCGAAATCTTCCAAGAAGAAAAAACGCTCCAAAGCCAAACAAGAGAGGGAGGTTTCACCCGTGGAGTTTGCGATTGATCCCAATGAACCGACTTACTGCTTATGTAACCAAGTGTCTTACGGCGAAATGATAGGATGTGATAACGAACAGTGTCCTATTGAGTGGTTCCACTTCTCGTGTGTTGGACTCACCTATAAACCGAAGGGGAAATGGTATTGCCCCAAGTGCAGAGGAGATAACGAGAAAACGATGGACAAATGTACTGACAAATCAAAAAAGGATAGAAGATCGAGGTAGTGAATGCGATTCGTGTTTTAAAGAGTTGCTCCTTTTATATTGAAATGTTTAATTTCCAGAGAATGCTGTTTTAGG--AGATGCATAAGACTATGCAATAATTTTTAATCTATAATATTAATGGAGTATTAAAAGCTGTTATACCT--TCTGTGATCTTTAACTTTCTGCACTGAATAACCAAATAGTCGAAACAGGGTGG-CTTCAGA .......:-----..:::..x...x.x.:..xx.x::...x:...x.x:.----.x....x.....:.x...........x..:..:.....:........:...xxx..::.:...::x:x:...........::.:.......x:......x.:..x:....:..:.........:.x........:.....x.....x.....x..:.....x...:....:..:...x.:..xx....:.....:x:......x........:..:....:xx......::..-.:......-:..x..:..x........x...x....:.....:.....x...x.x.....:..:x.......:.....:..:.....:..::.:..:..:..:..x..:.....:..x.....:..:.................:..:.:...x..:..xx.x.....:..:...........:.....:..:..:.....:.:......:..x........:..x.....:........x..x...........:..............:..x..:..............:..:...........x.....:.....:.....:..:......xx...:...........:....................x........:........:........:.........x.......x..:x...........................:..x..x..:.:::........:...::.:x.:..x...xx..x.xx..x::..:....:..---.........--.:..............................xx..:.........x..........:....:...:.--.......-.:....:............:.x........x.:xx...x:...:.-....... 8M5I37M4D233M1D8M1I502M3I9M2D68M2D7M1I45M1D7M 727/924 78.7% 934/94230402 0.0% 20/924 2.2% 130504898 59709657 +3027 chr4 + 190214555 183518623 183518622 183518663 41 TATTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTGAGACAG chr4 - 94230402 50117655 50117654 50117695 44112708 44112707 44112748 41 TATTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGCAGCAG ..............:..................x.x::... 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 133400968 56813587 +3015 chr4 + 190214555 183525003 183525002 183525063 61 TCACCGTCTCTCTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTCTTTTTTTTTTTTT chr4 - 94230402 40193308 40193307 40193368 54037035 54037034 54037095 61 TCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTT ...:.x.:.......:.x......x..::::xx.:...x:.......:........:.... 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 143331695 46882860 +4013 chr4 + 190214555 183527429 183527428 183527576 148 AGGAAGGAAGGAGAAAGAAAAGGAACAAGGTAAGAAAGAACGAGAGAAGG----AAAGAAAGAAAGAAGAAAGAAAAAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGA chr4 - 94230402 44053989 44053988 44054136 50176267 50176266 50176414 148 AAGAATGGAGGAGAAAGAAAAG-AAGGAGACAAGAAAATGGGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACAAAG---AACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAAA .:...x.:..............-..x:..::......:x:x.:::.x:..----:...............x.:...x::.x.x.:..---..x.......:x:.x:x.:..:x:.:x:..x....::...:..:.:::x..x....x...:. 22M1D27M4I33M3D62M 93/144 64.6% 148/94230402 0.0% 8/144 5.6% 139473440 50741115 +4204 chr4 + 190214555 183527514 183527513 183527626 113 AAAGAGAAAGAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAAGGGGAAAAAGGAAAAAAAAAAGAAAAAAAATAGAGATGGGG chr4 - 94230402 30533164 30533163 30533276 63697127 63697126 63697239 113 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAG ...x.:....::...:...:..:::.:..........xx.x..:....x:.::.xxx....x.:...xx...:x:...:..x..::.........:....x.:x.::.x..:. 113M 73/113 64.6% 113/94230402 0.0% 0/113 0.0% 152994350 37220205 +3408 chr4 + 190214555 183527547 183527546 183527612 66 AAGAGAGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAAGGGGAAAAAGGAAAAAAAAAAGAAAAA chr4 - 94230402 9237695 9237694 9237760 84992643 84992642 84992708 66 AGGGGATATAGTGGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGA .:.:..x.x..x::......:..:x..x.:...::......::..................::.:. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 174289852 15924703 +3042 chr4 + 190214555 183527557 183527556 183527614 58 GAAAGAGAGAGAGAAAGAGAGAGAGAGAAGGGGAAAAAGGAAAAAAAAAAGAAAAAAA chr4 - 94230402 87012028 87012027 87012085 7218318 7218317 7218375 58 GGAAGAGAATGGGGGGAGGAGGGGGGGGAGGGGGGAAAGGATAAAAGAAAAAAAAAAA .:......:x.:.:::::...:.:.:.:.....::......x....:...:....... 58M 40/58 69.0% 58/94230402 0.0% 0/58 0.0% 96515529 93699026 +3081 chr4 + 190214555 183547477 183547476 183547549 73 CTGTAGCCTTGACCTCCCAGGCTCAAGCAGTCCTTCCACCTCAGCCTTCCAAGTAACTGGAACTACAGGCACA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..::....:x:.x..:.::..:.....::x.:.x:xx:x.........:......:...........x.::.. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 165350351 24864204 +3301 chr4 + 190214555 183551170 183551169 183551295 126 CAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGAGAGAGAAAGGAAGGAAGGAAGGAGGGAAAAGAAAGAAAGAAAGACAGAAGGAAGGAAAGAAAAGAAAAGAAAGAAAAAGGAAGGAAGGAAGGA chr4 - 94230402 65224894 65224893 65225015 29005388 29005387 29005509 122 CAAAGAATAAGCAAACAAGGAATGGAGAGGGAGGGAAGTAAGTCAGAACAGAAAGCATGAAGTCAAGAGAATAAAAACAGTACAAAAGAAAG----GAAAATGAATAATCTGGGAGGAAAGAAAGA ....:..x..:x...x......x.:.:::::::.::..x...xx..:.x:...:.x:x...:xx..:::..x...:....x.x:..:.....----.....x:..x..xxx..:.....:...:.. 92M4D30M 75/122 61.5% 122/94230402 0.0% 4/122 3.3% 118326276 71888279 +3225 chr4 + 190214555 183551171 183551170 183551289 119 AAAAAAAAAAAAAAAAAGGAAAGAAAGAAAGAGAGAGAAAGGAAGGAAGGAAGG----AGGGAAAAGAAAGAAAGAAAGACAGAAGGAAGGAAAGAAAAGA-AAAGAAAGAAAAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAG-AGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.....::..:....:....-.:.::.....:...xx.x:.::...x..:.----.:.:x.....xx....x.:.::x.x:.....::.....:..:.-.xx.:..:::.:.....x:... 23M1D30M4I43M1I22M 76/118 64.4% 123/94230402 0.0% 6/118 5.1% 153018007 37196548 +3417 chr4 + 190214555 183551172 183551171 183551244 73 AAAAAAAAAAAAAAAAGGAAAGAAAGAAAGAGAGAGAAAGGAAGGAAGGAAGGAGGGAAAAGAAAGAAAGAAA chr4 - 94230402 40472546 40472545 40472618 53757785 53757784 53757857 73 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGA ........:............:...:::..:.:.:.:::..::...xxx...::.x.....::.x.:....:. 73M 49/73 67.1% 73/94230402 0.0% 0/73 0.0% 143078626 47135929 +4056 chr4 + 190214555 183551176 183551175 183551293 118 AAAAAAAAAAAAGGAAAGAAAGAAAGAGAGAGAAAGGAAGGAAGGAAGGAGGG----AAAAGAAAGAAAGAAAGA-CAGAAGGAAGGAAAGAAAAGAAAAGAAAGAAAAAGGAAGGAAGGAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.....::.:........::.:.:.........:xx.x:.::...x.::.----..:.x.....xx....x.-x....x..:.:...:..:......x.xx.:...:.::.....x:... 53M4I18M1I47M 80/118 67.8% 123/94230402 0.0% 5/118 4.2% 153018012 37196543 +3375 chr4 + 190214555 183551178 183551177 183551253 76 AAAAAAAAAAGGAAAGAAAGAAAGAGAGAGAA----AGGAAGGAAGGAAGGAGGGAAAAGAAAGAAAGAAAGACAGAAGG chr4 - 94230402 62511306 62511305 62511385 31719018 31719017 31719097 80 AAAAGATAAAGAAAAAAAAGGAAGACAGAGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGG ....:.x....:...:....:....x....::----..xx..x..::..x..:.:::...:x....:............. 32M4I44M 55/76 72.4% 80/94230402 0.0% 4/76 5.3% 121039872 69174683 +3345 chr4 + 190214555 183551186 183551185 183551294 109 AAGGAAAGAAAGAAAGAGAGAGAAAGGAAGGAAGGAAGGAGGGAAAAGAAAGAAAGAAAGACAGAAGGAAGGAAAGAAAAGAAAAGAAAGAAAAAGGAAGGAAGGAAGG chr4 - 94230402 5029081 5029080 5029189 89201214 89201213 89201322 109 AAGTGGAGACAGGAAGGAAGGGCATGAAAAAAAAAAGGGAGAGAGGTCAACAAGAAAAGTACAGCTTAAAGGAAAAAAAGGAAAAGAAAAATAGCCAAAAGCATGAGAG ...x::...x..:...::..:.x.x.:..::..::.:....:..::xx..x:.:.:..:x....xxx:.......:...:.........:.x.:xx:..:.x.x..::. 109M 65/109 59.6% 109/94230402 0.0% 0/109 0.0% 178522105 11692450 +3028 chr4 + 190214555 183551210 183551209 183551266 57 AGGAAGGAAGGAAGGAGGGAAAAGAAAGAAAGAAAGACAGAAGGAAGGAAAGAAAAG chr4 - 94230402 65182386 65182385 65182442 29047961 29047960 29048017 57 AGGGAGAAAAGAAGGAGGAAAAAAAAAAAAAGAAACTGAAAAGTGGGGGAATAAAAG ...:..:..:........:....:...:.......xxx.:...x::..:..x..... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 118368824 71845731 +3025 chr4 + 190214555 183555649 183555648 183555693 45 ATCTCAGAAAAAAAAAAAAAAAAAAAGAAAACAAAACCCCCACAA chr4 - 94230402 49791647 49791646 49791691 44438712 44438711 44438756 45 ACCTAAGGAAAGAAGGAAAAAAAAAAAAAAACAAAACCCACACAA .:..x..:...:..::..........:............x..... 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 133764002 56450553 +3518 chr4 + 190214555 183556474 183556473 183556534 61 CTCCCGGGCTCAAGCGCTTCTCTTACCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:...:.....:.....x.xx:x........::.:.........:......x.:.... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 165359335 24855220 +3346 chr4 + 190214555 183558569 183558568 183558637 69 CAAGACTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAGGATTGATGTATGCCACTTCTAAACAAAAACTT chr4 - 94230402 10032097 10032096 10032165 84198238 84198237 84198306 69 CAGGATTCTGTCTGGAAAAAAAAAAAAGGAAGAAGAGCAACGAAGCCTACCCCTGCTACATGAAAACTT ..:..:.......::............::..:..:..x.x:..x.:x.:..x..x...x.::....... 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 173526472 16688083 +3529 chr4 + 190214555 183569682 183569681 183569753 72 CTCCCGGGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGTTGGGATTACAGGCGCCCACCACCATGCA chr4 - 94230402 18197139 18197138 18197208 76033195 76033194 76033264 70 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGTA ..:.:.........:.x...x..x.x........::.:.....:...:.:....--..:x......::..:. 54M2D16M 52/70 74.3% 70/94230402 0.0% 2/70 2.9% 165372543 24842012 +3218 chr4 + 190214555 183579691 183579690 183579744 54 CTTTTCCATCTTTTATAACCTTTTATTATTTTCATATTTAAAGTGCATTTATTG chr4 - 94230402 87582666 87582665 87582719 6647684 6647683 6647737 54 CCTTTCCATCTTTTCTAAGTTTCTTTTATTTTCACATTTAGAGTGCAGTTCTCG .:............x...x:..:.x.........:.....:......x..x.:. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 95997025 94217530 +3500 chr4 + 190214555 183581875 183581874 183581948 74 CTGCAGCCTCAACGTCCCGGGCTCAGGCAATTCTCCCACCTCAGCCTCTCAAGTAGCTGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x..xx.:.:...:...:.::x...x.xx:x........:............:......x.::... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 165384749 24829806 +3653 chr4 + 190214555 183592400 183592399 183592473 74 CTGCAACCTCACCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:x.xx..:.::........::x...x.xx.x........::...........:......x.:.... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 165395274 24819281 +3606 chr4 + 190214555 183604875 183604874 183604957 83 CCACAACCTCTGCCTTCGAGGTTCAAGCGATTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCATGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG .:...:..:xx:x....x:........:.x...x:xx.x.........:...........:......--.:..::....::.. 67M2D14M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 165407749 24806806 +3081 chr4 + 190214555 183608777 183608776 183608856 80 CCTAGTATTTCCACTAGTTCATCATCATAATCACCTATGAGTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAATCCCAGG chr4 - 94230402 18071469 18071468 18071548 76158855 76158854 76158934 80 CTTAATTTCTTTTCTAGTTCCGCCACTCGATTACCTAGAATTCTTTGAAAAAAAAAAAGAAAACAAAAACAGAAGTCAGG .:..:.x.:.::x.......xx.xx.x::..:.....x:.x.:...............:....x.....x.:.xx:.... 80M 54/80 67.5% 80/94230402 0.0% 0/80 0.0% 165537308 24677247 +3289 chr4 + 190214555 183615572 183615571 183615628 57 TTCTTTGTTTCTTCTTTCTTTTCTTTCCTT-TCCCTCCCTCCCCCTCTCTCTCTCTTT chr4 - 94230402 34463016 34463015 34463073 59767330 59767329 59767387 58 TTCTTTATTTCTTTTTTCTTTTCTTTTCTCATCCCCCCCCCCCCCCCACTCCTCATTT ......:......:............:..:-....:...:.....:.x...:::x... 30M1I27M 45/57 78.9% 58/94230402 0.0% 1/57 1.8% 149152556 41061999 +4025 chr4 + 190214555 183616650 183616649 183616728 79 CTGCAGCCTCAACCTCCTGGGCTCAAGCGATCCTCCCACCTTAGCCTCCCAAGTAGCTGGAACTACAGGTGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.....:x..x..:.....:.....:.x.:.x.xx:x..:.....::..................--:......... 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 165419524 24795031 +3011 chr4 + 190214555 183617193 183617192 183617244 52 CTCTTTCTTTTCCCTCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTTCT chr4 - 94230402 75632873 75632872 75632924 18597479 18597478 18597530 52 CTCTTTCTTTCCCCCCCCTTTTCCACTCCTTCCCTTTTCTCTTTTACTTTCT ..........:...:.....:::.x....:...:..:::..:...x:..... 52M 38/52 73.1% 52/94230402 0.0% 0/52 0.0% 107984320 82230235 +5234 chr4 + 190214555 183617199 183617198 183617341 143 CTTTTCCCTCCCTTCCTCCCTCCCTCCTTTCCTTCCTTTCTTTTCTTTCTCTTTCTTTTTGTTCCTTCCTTCTTCTCTTTTTCTTTCTTTTCCTTCCTTCCTTCCTCTCTCTCTTTCTGTCTCCTTCCTTCCTTCCCTTCCTT chr4 - 94230402 25128057 25128056 25128179 69102224 69102223 69102346 123 CTTTTATTCCACTTCCTCCCTTGCTTTCTCCCTGCCTTCCTTTTCTTTCTCGTACTT--------------------TttctcttcctttcccttcctttccctctcctccccttcccatcacgtcccttccTTCTTTCACCT .....x:::.x..........:x..:::.:...x....:............x.x...--------------------...:....:....:........:.:::...:::.:...:.::..x.x.:.........::.:x.:. 57M20D66M 86/123 69.9% 123/94230402 0.0% 20/123 16.3% 158489142 31725413 +3203 chr4 + 190214555 183617238 183617237 183617312 75 CTTTTCTTTCTCTTTCTTTTTGTTCCT-TCCTTCTTCTCTTTTTCTTTCTTTTCCTTCCTTCCTTCCTCTCTCTCT chr4 - 94230402 22629303 22629302 22629377 71601026 71601025 71601100 75 CTTTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATT-TATTCTTTGCTTCCTTCCTCTCTTCCT ...........:..::..:x.....x.-.:.x.::...:..x...x..-.x...:..x..............::.. 27M1I20M1D27M 56/74 75.7% 75/94230402 0.0% 2/74 2.7% 160987935 29226620 +3347 chr4 + 190214555 183617285 183617284 183617390 106 CTTTTCCTTCCTTCCTTCCTCTCTCTCT-------TTCTGTCTCCTTCCTTCCTTCCCTTCCTTCCCT---CCCCTTC--CCTCCCCTTCCTTCCTTCCTTTCTTCTTTCTTTCTTTC chr4 - 94230402 83016315 83016314 83016432 11213971 11213970 11214088 118 CTCTTCCTTGGGCTCTGCTTCACTCTCTGCAGTACTCATCTCTCCTCTCTTTCTACTCTTCCTCTTCTTTGCCCTCTCATCCACCTCTTCCCACTTAGCTTTCTGCTCCCTTTCTTTC ..:......xxx::..x.:..x......-------.:x.x......::...:..x.:......:::..---...::..--..x..:.....:x.:.xx......x..::......... 28M7I33M3I7M2I38M 74/106 69.8% 118/94230402 0.0% 12/106 11.3% 100600970 89613585 +3283 chr4 + 190214555 183617336 183617335 183617386 51 TTCCTTCCCTCCCCTTCCCTCCCCTTCCTTCCTTCCTTTCTTCTTTCTTTC chr4 - 94230402 83554931 83554930 83554981 10675422 10675421 10675472 51 TTTCTTCTCCCCCCTGCCTCCCCCCTCCTTCTTTCCTTTCTCTCTTCTTCC ..:....:.:.....x..::....:......:.........:::.....:. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 100062405 90152150 +3232 chr4 + 190214555 183617340 183617339 183617411 72 TTCCCTCCCCTTCCCTCCCCTTCCTTCCTTCCTTTCTTCTTTCTTTCTTTCCTTCCTCTTTCTTTTTTTTCA chr4 - 94230402 35294589 35294588 35294660 58935743 58935742 58935814 72 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTA ..:....:::......:x.x..x:...:.:::::.:.x.......x:.............:x.....::.:. 72M 48/72 66.7% 72/94230402 0.0% 0/72 0.0% 148322751 41891804 +3172 chr4 + 190214555 183629192 183629191 183629237 46 CTCAAAAAAAAACAAAACAAACAAACAAAGAAAACAGAAAGAACCC chr4 - 94230402 81661607 81661606 81661652 12568751 12568750 12568796 46 CTTAAAAAAAAACAAAACAAACAAACAAACAAAAAAAACAGAAGCC ..:..........................x....x.:.x....x.. 46M 40/46 87.0% 46/94230402 0.0% 0/46 0.0% 101967585 88246970 +3003 chr4 + 190214555 183634131 183634130 183634208 78 AAGGTTGTCTCATCCTGAAACTATTTTTAAAATCTCCATTTCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 85684725 85684724 85684802 8545601 8545600 8545678 78 AAGCTTGTTTCCATCTGATCTTAATCTTACAGAATCCACTTCTTTTCTTTTCTTACTTTGCTTGTTTCATTCCCCTTT ...x....:..xx:....xx:..x.:...x.:xx....:...............x....x:..x...:x..::::... 78M 53/78 67.9% 78/94230402 0.0% 0/78 0.0% 97949406 92265149 +3547 chr4 + 190214555 183638082 183638081 183638153 72 CCACAACCTCCATCTCCCGGGTTCAAGCGATTCTCATGCCTCAACCTCCTGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC .:...:..:xx.x..:.:.........:.x...x..x.x....:...::::.........:.:....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 165440956 24773599 +4949 chr4 + 190214555 183641220 183641219 183641496 277 ACATTTTCACCTTTTATTAAGGCAAGTTTGTGAAAATAATTTAATACAACAAGATCTCTTCATGAACTTTCAACTTACAACCTTTTTAATGTAAGA--AACATACAAAAAATTGTGTTTTATAAAAAGTC-GCCTCAATACCAGAAAATAGTAAT----GAAAGATTTTGAACCCAGTTTTACTCT---TTAAAGAATGCTCTTTCCTTGTCTCAAATTCCAAGTGCTACTCATCATCCTTAGAGCCAGTTTTGCTTAACTATAAAAAAA----AGAGAGAAAATAGTCAA chr4 - 94230402 53040496 53040495 53040764 41189639 41189638 41189907 269 ACATTTTTACCTCCATTTAAGGCAAGTTT--------AGTTT--TCGAAGAAGACC-----ACGTAGTCTCAA--GACAAACTTGTGTGTCTAGGTTTACGAGTTAGGAAATTGAGCTTTATAAAATGTTTACTTCAACAAATAAGAAGGCTATTAAGAGAAAGACGGTGA-CCCAAAATTGCACTGTATTAAGAGGTTGAGTTTCCATGTACCAAAGTCC----TTTATTCATCATCTTTAGAACCAGTTTTGCTTAACTATAGAAGAGACACAAAAAGAAAGTGTTCAA .......:....::xx.............--------.:...--.xx..x....:.-----.:.x.x.:....--x....x...x.xx:.x..:.x--.xx.xx:.::......x.:.........x..:-:.:....:.xxx:.:..x:x..x.----......:xx...-....:xx..:.x..---....::::.xxxx.....x...x:....x...----x:..:........:.....:...................:..:.:----.:.:.....:.:x.... 29M8D5M2D12M5D12M2D21M2I32M1I24M4I12M1D14M3I32M4D45M4I17M 176/255 69.0% 269/94230402 0.0% 36/255 14.1% 130600724 59613831 +3039 chr4 + 190214555 183643053 183643052 183643133 81 CGTTCAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAAAATTAAAAAAAAAAAAAAAAGA chr4 - 94230402 70445411 70445410 70445491 23784912 23784911 23784992 81 CATTTTAAAATAGATGAACAAATAAATTCCTGCTTAGAAAAGTTATTAATTGAAATAGAAAATAATAATAAGAAGAAAAAA .:..:x......:..:..:........xxx.:xx..:.x..:.x.x...x.:.....:...x...x..x..:..:....:. 81M 55/81 67.9% 81/94230402 0.0% 0/81 0.0% 113197642 77016913 +3046 chr4 + 190214555 183643403 183643402 183643450 48 AAGACTCTATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCA chr4 - 94230402 61963814 61963813 61963861 32266542 32266541 32266589 48 AAGACTGTATTTAAAAACAGAAGGGAAAAAAGAAAAAAAAAAAAAGCA ......x...:.x....x.:..:::......:................ 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 121679589 68534966 +6623 chr4 + 190214555 183646326 183646325 183646570 245 TAAAAGGTATTTCAAAAATACTTACATGCTGAATGTA---AAAAAGGAAACAGACATCCCAGTGAATTCCAAAGGTTGTGAAGGGGAAAACAAAAAATAAGAATTTCATTATTTGCTGGTAATAATTGTAACAAGTTTAAAGA----------------------CTAGAATATAAATGTTATA-TACCTTCACAACATCAACCCAGTTCCAGCCTCGAGGAAGTTCTCCTTTGTGATCTAGAAGATAAAAAATAGTAACTTTATTTCTAA chr4 - 94230402 53041580 53041579 53041836 41188567 41188566 41188823 257 TAAAAGGTAACTTGAAAATACTTACATGCTGGATGTATGCAGATATGAATCAGATGCCACAGTCAAATCCAAACA----GAGTTGGAAAA--AAAAATCAGATTAGTTTTCTTCAGATGTACAAATCAATTCAAATGCACAGAGGCAGTATGCTCATAATACTGCTTATCATACA---GTTGTACTACCTTAATGACGTCCACCCAGTTCCATCCTCGAGGAAGCTCTCCTTTGTGATCTGCAGAATAACAA-----GGTTTTATTTTCAA .........x:.::.................:.....---.:.x.x...x....:::.x....x..x......x:----..:xx......--......x...x.xx:x..x..::xxx...xx...::xxx...:.x:.x...----------------------:..xx...:.---...:..-......x.::..:..x...........x...........:...............:x.::....x..-----:::.......::.. 37M3I35M4D11M2D51M22I10M3D6M1I67M5D14M 166/231 71.9% 257/94230402 0.0% 40/231 17.3% 130604746 59609809 +7824 chr4 + 190214555 183649423 183649422 183649584 162 AAAGAAAAGAAAAGAAACACACACAAACCTGTTTTGTCTGCCAGCTTACGCTTCTGGGCTTTTGAAAGTTGTTCTTTTTTGTCTTTTTTCTTACTTGATGGGGCTGTATTAGGAGTTTCAATTGAGATGATATTGCTTATCGATGTCTAAAAAAAAAAAGAA chr4 - 94230402 53045727 53045726 53045885 41184518 41184517 41184676 159 AAACATAACAACAGTATAGTAGACAAACCTGTTTTGTCGGCTAGCTTTCTTTTCTGGGTTTTGGATAACTGTTCCTTTTTGTCTTTTTTCTTATTTGCTGG---TGCATCAGGAGTTCCAATAGAAATACTATTGCTTACTGAAGTCTGAGAAAGGTGAAAA ...x.x..x..x..x.xx::.x................x..:.....x.x:.......:...x..x.::.....:..................:...x...---..:..:.......:....x..:..:x.........::..x....:.:...::x:.:.. 101M3D58M 119/159 74.8% 159/94230402 0.0% 3/159 1.9% 130603696 59610859 +15690 chr4 + 190214555 183650978 183650977 183651344 367 ACTCACTGCGGAATTGATGGGATTGTGATTCTCCATGAACTGCTCTTTATTGTCTTTGGCATATTCAAACAATGTATAGGTCATAGCGGTTCCAAGATTAGCTTCTACTGCTTCCTGTAGCTTGGCTAATATACTCTGCTTTACAGCTGATGATCTACAATGCACAACAAAA---ATACCTTGCTGAGAGAAAAGTATAACAGAGAGTGAAATGAAAAGC-------AGTAAAAACAAG-------------ACAC-TACTCACATGGTGTTGTTAAAAAAAGCGTTCATAGATAGAATTGGAGGTGTTTGGGGATATGTTTCTGTCCAGGAAATCTCTATTAAGAAGGCTTTGGGATCACCATTTTCACCTATCTGAAGAGAAGGGGAAA chr4 - 94230402 53046637 53046636 53047024 41183379 41183378 41183766 388 ACTTACCACAGTGTTAACTGGCT---GATTTTCCATGAATAACTCTTTATTATCTTTGGCATATTCAAAAAGTGTGTACGTCATAGCAGTTCCAAGATTGGCTTCAACTTCTACCATTAATTTATCCAATATACTTCGTTTAATAGCTGAAGATCTGAAAAAAATCATAAAACTCATCTATAATCTAGACAGAAGAAAAAAGGCTCATCAACCAAAAAGCTCCCATAAGTAAAGTTAGGGAGTGAAGCTATCATACATACTTACATTGTGTTGTTGAAGAAAGCATCCATTGATATGACTGGTGCTGTTTGTGGATATGTTTCTGGCCAAGAAACTTCTATTAGAAAGGCTTTGGGATCTCCATTTTCACCTATCTGAAAGAAAAGTGAAA ...:..::.:.x:..:.:x..x.---....:........:x:.........:.................x.:...:..x........:...........:.....x...x..x..xx..::..:x.:........::.:..x.:......x.....:x..x:x.:x.:....---..x:x.x:::x...x.:...x.x..x:.xxx:.x..x::......-------......:x:.:.-------------.:..-....:....x........:..:.....:.:...x....x:.:...x.x......x.............x...:....::.......::..............x...................:::..:.x.... 23M3D146M3I45M7I12M13I4M1I134M 267/364 73.4% 388/94230402 0.0% 27/364 7.4% 130604341 59610214 +5203 chr4 + 190214555 183655873 183655872 183655965 93 TGTCTTACCCTATATTGAAAAGAAACTGGACTTAATTCCCGGAAACTTTCATCTCCTTCATAAATAGAGCGTAATGCTTCTAGTTCCATCTGA chr4 - 94230402 53048989 53048988 53049081 41181322 41181321 41181414 93 TGCCTTACCCTGTACTGGAAGGACACCGGGCTGAGCTCCCTGAAGCAGCCGTCTCCTTCGTAGATCGAGCGCAGCGCCTCCAGTTCCATCTGA ..:........:..:..:..:..x..:..:..x.::....x...:.xx:.:........:..:..x.....:.::..:..:............ 93M 68/93 73.1% 93/94230402 0.0% 0/93 0.0% 130606884 59607671 +11752 chr4 + 190214555 183663868 183663867 183664077 210 ATGAGCCCCACACAGTGGGACTTCCCTGTGGAATTATGTTGCCGGCCTATGGCCTTTGTTACTCTAACGGGCCTGGATGTAGTTTATAATGCAGTCCATCGAGCTGTCTGGGACGCCTTCTGTGCAAATCGGAGAGCTGATCGAGTACCAATTTCTTTCAAGGTGCTCCCAGGTGACCATGAGTATCCCAAATGTAGACCCAAGGTAATG chr4 - 94230402 53049614 53049613 53049823 41180580 41180579 41180789 210 ATGACTCCGAGCCAGTGGGACTTGCCGGTGGAGCTATGCTGCCGGCCTATGGCCTTCGTCACCCTCACCGGCCTGGACGTGGTGTACAACGCCGTGCACCGGGCCGTGTGGGATGCCTTCTGCGCCAACCGGAGGGCCGACCGCGTCCCCATCTCCTTCAAAGTGCTGCCCGGCGACCACGAGTACCCCAAGTGCCGGACGAAGGTAGCG ....x:..x.xx...........x..x.....::....:.................:..:..:..x..x........:..:..x..:..:..x..x..:..:..:..x.....:........:..x..:.....:..:..:..x..x..x..:..:.....:.....x..x..:.....:.....:.....:..:x.:x.x......::. 210M 158/210 75.2% 210/94230402 0.0% 0/210 0.0% 130614254 59600301 +12794 chr4 + 190214555 183666247 183666246 183667143 897 ATGTTTGCAGAGAACTTCATATGAGTGGTACATTCCTAAAGGGATCTTAAAGACTGGCTGGATGAATAAGCATCTGAATCTGGTGCCAGCCCTGGTGGTTGTGTTCTATGAACTGGACTGGGATGAGCCTCAGTGGAAAGAAAAGCAGTCTGAGTGCGCCACCAGAGTGGAAATAGTCAGGTATGATCTTCTGTGTCAGGGCAGCTATGTCAGTTTGCACATGTGTGTTATTCACTAACATTCCTTGAAGGCAATGGAGTACCGTTCAGACTGCAGTGGTCACTTTGCGGATTGACCTCCAGTGAATCTTGTTCACTTCCTCACAGGTAGCATAATTATTGACTGTATATAATGCTGGGTACGTGAAGAAATTTAGAAGACTAATTGGTCTGAATTTCCAAATGTTTTTCTTGTATTATCTTTTTTGGAGACATAGTAATTTACTGTTTAGTCTCTTAAAACGCTTTGCTTTATCACTGTTTAAGTTTCAAATAA--TTAATTCTTTTGGATGACTACTCTGCAGTGTATCACCATAAAGAAGTAAGTTGCATTATAAC----TTTTACGTAAAAGT-----------ATACATTAATCTTTTGCTTTTAAGGAAGATTTTTAAGATTAGAAGATGTGAG-ATCATACTTTTAGAATTTAAATCATTGTGACATATATGTGCTTTGTGTGCAGGAAAAGATTTCTTCTGATCTTGGTTTTTTTAGTTGAAATTTATCTTCGGTTGAATGACCAAGGTTGTA-TTTTATGTGA--AGTCATGAATACATTTTTTAAGTTAAAA--TAATTAATTTTATTCTTGCTTTTTCATTGCAGGCAAAGTTTACAAGGAAGAAACACAAAAGTTGCAGTGGTTCTGATTCAGAAGAAAACCCCTTTGCCCCCAGGTATCAGAAGTCT chr4 - 94230402 53050469 53050468 53051151 41179252 41179251 41179934 683 ATGTTTCCAGAGGACCTCCTACGAGTGGTATATTCCAAAAGGGATCCTAAAGACGGGTTGGATGAACAAACACCTGAATTTAGTTCCTGCACTTGTGGTGGTGTTCTATGAACTGGACTGGGATGAGCCACAGTGGAAAGAAAAGCAGTCGGAATGTGCCACTCGGGTTGAAATTGTCAGGTA--GTGCTCTGTCTC-------CTCTGTAAG-----------GTGCTAT-----------------------------------------------------------------------------------------------------AAGTTATTGATGAAATGT------------------AAATTGTGGAGTCT------TCTGTGTTT--AAAACATTTAAATATATAATCTTATACG----CAAATTAAGAGGATATTGAGT------------TTTGCTTTTTAAC--GTACAGCTAAAAGTAAAGGCACTTTTTTTGTATGGCTTATTTG---------------GAAAAGTCACTTAAGTAATAACAGCTTCTGAAGTGATATCTGCTAAACTCAGTACATTATTCT----CTCCTA--------TCTTAAT----GAAGAGGTGAGCACCATGTTC------TGTAGATGA-TGTAGCATAT-TGTGTTCAGTTT---------GATTTCTTATGTAGTGTGCTCTCATTGCTTCCACGTA-------------GACTGAAATGGAACTTTCATCTGATTATTCACAAATG------TGAAGTGAAGCCTTAATGAACTGTGTTA-----TTTTTATTCTAGGCAAAGTTTGCAAGGAAGAAATACAAAAGTTGCCGTGGTCTTAATTCAGAAGAAAACTCCATTACCTCCAGGTATTAGAAAGCT ......x.....:..:..x..:........:.....x.........:.......x..:........:..:..:......:.:..x..x..x..x.....x.............................x....................x..:..:.....:x.:..x.....x........--:.x:.....x..-------..x...x..-----------...:...-----------------------------------------------------------------------------------------------------x.:.......:x:x..:.------------------.....xx.:..x..------....x:...--...xxx...xxx.:...x.....x.x:.----..x.x...xxx:x.:..x...------------........x.x..--x.xx..:.xx..:...--x:.x..:.....x...:..xx.:..---------------:.:....x.x..:x:.x.....----.:.x.x..:.x.x:-----------:.......x...----..::..--------.:....x----.....x.....-.:...::.:------.x..:..x.-...::.....-....:.:x..x.---------........x..xxx.xx.:.:.:x.x.:.xxx.:x..-------------...::.::.x.x.-...:..x...--.x...::...:------.x....x..:x--....x..:.x.:..x-----....:...x:...........:...........:...........x.....::.:..............:..x..:..:........:....:x.. 183M2D12M7D9M11D7M101D18M18D14M6D9M2D28M4D21M12D13M2D16M2I25M15D22M4I14M11I12M4D6M8D7M4D11M1I9M6D9M1D10M1D12M9D37M13D13M1I10M2I11M6D11M2I15M5D96M 484/660 73.3% 683/94230402 0.0% 260/660 39.4% 130615778 59598777 +8265 chr4 + 190214555 183667996 183667995 183668181 186 TCAACAGGAGAAGATGTCATTGCTTCAGAAAGGGCTGCAGCTTTATGCAATGCATGTGAACTCTCAGGAAAGTCTTTGTTTGTACTGCCGCACACTGACCACCTTGTGGGTTATATTATAAGGTAAGTAGAGGTCTTTTAAAGTTTTGTTTTTTTAGATTATTAAGAATTGAGAAATTGGTAGCTT chr4 - 94230402 53052315 53052314 53052500 41177903 41177902 41178088 186 TCACTAGGGGAAGATGTTATTGCATCAGAGAGGGCAGCAGCTTTATGTAATGCTTGTGACCTTTCTGGAAAATCCCTCTTTGTGCTTCCACACACTGATCATCTCGTTGGCTATATTATAAGGTAAGCGACTGTAAATCGCTGTTTTGCTCTATGTGGCAATGGAGATGATGAGAGTTGATAGGTT ...x:...:........:.....x.....:.....x...........:.....x.....x..:..x.....:..::.x.....:..x..:........:..:..:..x..:................:::xx..xxx.::xx......:.:.x.xx.::x..x:...xxxx:::.:...:...x.. 186M 130/186 69.9% 186/94230402 0.0% 0/186 0.0% 130615681 59598874 +6153 chr4 + 190214555 183675150 183675149 183675242 93 TTGTCTCTTTTTAGCTTTTATTTGTTAGGCATCAGTTCAAAATAGCTTTCTTCAGTGAGTTGAAACAAGATACACAAAATGCGCTGAAGTAAG chr4 - 94230402 53055155 53055154 53055246 41175157 41175156 41175248 92 TTGTGTCTTGC-AGCTTCTGTTTGTTAGACACCAGTTCAAAATAGCATTCTTCAGTGAGCTGAAACAGGATACACAGAATGCTCTCAAGTAAG ....x....x:-.....:.:........:..:..............x............:.......:........:.....x..x....... 11M1D81M 79/92 85.9% 92/94230402 0.0% 1/92 1.1% 130619995 59594560 +8170 chr4 + 190214555 183677452 183677451 183677570 119 ATTTAGGAATTATAGGACCGCCTATAATCTTGTACACGAATTGAGAGCCCATGAAACTAATATTCTGGAAATTAAGACTATGGCAGGATTTATAAACTACAAGGTAATAATTCTGCTTC chr4 - 94230402 53055461 53055460 53055579 41174824 41174823 41174942 119 ACTTAGAAATTACAGGACTGCATATAATCTCGTACATGAATTAAGGGCTCATGAAACAAACATGCTGGAAATCAAGACCATGGCAGGATTTATAAACTACAAGGTAACAAGCATTCTTC .:....:.....:.....:..x........:.....:.....:..:..:........x..:..x........:.....:............................:..x:x.x.... 119M 99/119 83.2% 119/94230402 0.0% 0/119 0.0% 130621991 59592564 +13735 chr4 + 190214555 183679338 183679337 183680274 937 TTTTACATTTTGCAGATCTGTAGGCTGTGTTTTCAACACAACACCCCATTGGATGCAATTGCTCAGTTCCGAAAACACATCGACTTGTGTAAGAAAAAGATTGGAAGTGCAGAGCTGTCTTTTGAGCATGATGCATGGATGTCTAAACAGTATGTTTTACATTGTCCTTTTAGAATTTTTTAAAAATGATACATAGTATTTGGAGAAATAGCATGGACTTTGGTTCTAAAACTGAACCAGGTTTTTTGTCACTAAGTAGGTTTTTGATGATGTAGCATAAGTATGTTTCTGGTAATATTGTACATTGATATTGTATACAGTTCCTTAATGGGAATTATTTAATTCATGGTACCATCTTTTTCATTCAGCATATATTTATTGAGTCTCTACCATATGTCTAGGTCCTGGGGATATAGCAGTAAACAAAATTCCTGCTGTCATGGAGCTCACTGTTTGAGAATGAAGTTTAAAAATTGCTAAAATGAAATTGTTCCCAGAAACTTGGGTGTATTTATTTGAGTGGTAGGAACTATGTTGAGATCTAGTTTGATGGTATATTTATAAAGACTTGTTAGAAGAG------------ATGACTTAAATATAGAACCTATCTGT--AACCTACAGTTAGTGTGTATTAATATTTACAAAGAAATTAGAACAAATATTAACTGTTCATCAATAGCACCATTTTAACACAGTCTGCTGAGGTTAAGTTTCCCAGGATGAATTACCAGAAATAAGCTTCTTTTTCTTTTCATTCCTCTTTATTTCTTGATTTTCTTTTCTTTAAGATTCCAGGCCTTTGGAGATTTATTTGATGAAGCTATTAAGTTAGGGTTAACAGCTATTCAAACTCAGAATCCTGGTTTCTATTACCAGCAGGCAGCATACTATGCCCAGGAGCGGAAACAGCTTGCAAAAACCCTCTGTAACCACGAAGTAAGTT chr4 - 94230402 53056317 53056316 53056948 41173455 41173454 41174086 632 TTTGATTTCTTCTAGATCTGTCGCCTCTGTTTTCAACACAATACTCCACTGGATGCAATTGCTCAGTTTAGGAAGCACATAGACTTATGCAAGAAAAAGATAGGAAGTGCTGAACTGGCTTTTGAGCATGCTGCCTGGATGTCTAAACAGTATGTTTT------------------------------------------------------------------------------------------TTGCTTAGTA------------------------ATGTT--------TGTTTTACCTC----CTATGTATAACTTTTTGAAGCTCATTGTTT------------------------------------------------------TGTCTGG-----------------GTAAGATAAACTCT----------GAACTCTCTACATAAGAAAGAGG-----------------TGCACTTGTTCATAAAAGCTG---------------------------TGTGCTGTGATTTTGTTT--TGGCTTGATTATTGCCACCTTTTCACAGGGAAAGGTCATAGTATGACAGAAATGCAG-------CTGTAGAACCTAAA-------TGCAT--------------AAGTTCACAGAAGCATTGTCTGTC-----------------------------------TTAAGACTAACCAGAACTTTTAGCTGAAAT--GCCCCTTTTGGTTCCTATTGCTGTTCTGTATCTACCTATCTTTTTTAT-AGGTTTCAGGCTTTTGGTGACTTGTTTGATGAAGCGATTAAACTGGGCTTGACAGCAATTCAAACTCAGAATCCAGGTTTCTACTACCAGCAAGCTGCCTACTATGCTCAGGAGCGGAAACAACTAGCAAGTATGCTTTGTAACCATGATGTAAGTT ...x.:x.:..x:........x.x..x..............:..:...:...................:x.:..:.....x.....:..:...........x........x..:...x............x...x.......................------------------------------------------------------------------------------------------.::..x....------------------------.....--------.:..x...x.:----:.:.:..:.::.::..:.x.xxx...:...------------------------------------------------------.....:.-----------------....:xx...:..:----------..:...x..::x.:....x..:.-----------------..x.x......x:.:..:..x---------------------------.:..:..x...:.x....--...:x.:x....x:xx..:.x..x:x..:.------------.....xx....::..-------....--......x.-------..:..--------------..:..x:x.x..::...:x....:-----------------------------------.....x:.xx.x:..xxxx...x.x.....--..::.....xx..:::...x..x..:xx.x::.:x:.x......:.x.-..:..:.....:.....x..:..:...........x.....::.:..x..:.....x.................x........:........:..x..x........:..............:..x....:x.:x..:........:..x....... 158M90D10M24D5M8D11M4D30M54D7M17D14M10D23M17D21M27D18M2D30M12I15M7D4M2I8M7D5M14D24M35D30M2D48M1D157M 455/618 73.6% 632/94230402 0.0% 333/618 53.9% 130623021 59591534 +7297 chr4 + 190214555 183682721 183682720 183682828 108 TTAATTTACAGGCTTCTGTAATGTATCCCAATCCTGATCCCTTAGAAACACAAACAGGCGTTCTTGACTTTTATGGACAAAGATCATGGCGACAAGGAATACTAAGTA chr4 - 94230402 53057395 53057394 53057502 41172901 41172900 41173008 108 TTAATTTACAGTCCTCTGTGGTATATCCCAACCCGGATCCCTTGGAAACACAGACTGGAGTGCTTGACTTCTATGGGCAGAGACCATGGCGGCAGGGAACATTAAGTA ...........x.:.....::.:........:..x........:........:..x..x..x........:.....:..:...:.......:..:....:.:...... 108M 88/108 81.5% 108/94230402 0.0% 0/108 0.0% 130625326 59589229 +15472 chr4 + 190214555 183683946 183683945 183684391 446 TAAAATGAGTTGTGTCTCATCTTACGCAGGTTTTGATCTTTCTGATCCTGAAAAAGAAAAGGTGGGAATTCTTGCCATTCAGCTGAAGGAGAGAAATGTTGTTCACTCTGTAAGTTTTGTGTCCAATATAAACTATTTTTTACACTATTTAAGAAAAATATTTGTATTGAAATGTTTCACACTCTACTTTTTCTAATAGGAGATAATCATAACTCTTCTGAGCAATGCTGTTGCACAGTTCAAGAAGTATAAGTGCCCGCGAATGAAAAGTCACCTAAGTATGTATCCA----CAAACGTCACCATTGCATGCAACTTTGAATGACTTTAAG--TTACATACATAAATCTTTTT--TTCCTTT---------ATAGTGGTTCAGATGGGAGAGGAATATTATTACGCAAAGGATTATACCAAAGCTTTGAAGTGAGTCCTGTTCACTATT--TACTTTTACAAGT chr4 - 94230402 53058763 53058762 53059216 41171187 41171186 41171640 454 TGACATGGATTTTTCACTGTCTTATGCAGGCTTTGATCTTTCTGATCCTGAAAAGGAGAAGATGGGGATTTTATCCCTCCAGCTGAAAGAGAGAAATGTCCTTCACTCAGTAAGTCTTAC-TCTATTAAAAGTCTTTTCTGACCTAACTC--TAACATTACATGAATAACAATATT--------AATTTTATCTGTCAGGAGCTAATAATTACCCTGTTGAGTAATGCTGTTGCGCAGTTCAAGAAATACAAATGTCCAAGAATGAAAAGTCATTTGAGTGAGTATAAGTAGTCAGATGCATCTCTTAAATTCACATTGCAAGGGCTTCCAGCATTAGTCTGATGCATCTTTCTTGTTCATTTGTTTTTTAAACAGTGGTTCAAATGGGTGAAGAATATTACTTTGCTAAAGATTACGCCAAAGCTTTGAAGTGAGTACCTTCCCTGATTGCTTCTTCTACACGT .:.x...::..x.x:x:::.....:.....:.......................:..:...:....:...:.xx..x.:........:...........:x.......x......:..::-..:.x..x..:::x...:.x..x:x.:.:--x..x.x..:x..x..x:x...:..--------x.:...x...:x:.....x....x..x..:..x:....:...........:...........:..:..:..:..:x.............::.:...:x....xx:----..:.:.:xx.:x..:x..x..xx..xx..x.:...:x..--...xx:xx..:x......:.--...x...---------.:.........:.....x..:........:.x:..x..:.....::...................x.:x.:.x:x...--.x...:....x.. 120M1D29M2D24M8D105M4I39M2I20M2I7M9I78M2I13M 306/435 70.3% 454/94230402 0.0% 30/435 6.9% 130625183 59589372 +9435 chr4 + 190214555 183684689 183684688 183684844 156 CTTTG-AGGTTGCTGGATTATGTGATGTGTGATTATCGGAGTGAAGGATGGTGGACTCTGCTCACTTCTGTATTAACTACAGCTCTGAAGTGCTCCTACCTCATGGCCCAATTAAAGGATTACATTACTTACTCCCTAGAACTCCTTGGTAGAGGTA chr4 - 94230402 53060564 53060563 53060720 41169683 41169682 41169839 157 CTTTGCAGGCTGTTGGACTACGTTATGTGTGAATATCGCAGTGAAGGATGGTGGACCCTTCTCACTTCCATACTGACGACAGCTCTCAAGTGTTCATATCTGATGGCCCAGATAAAGGATTATATAACGTACTCTTTAGAATTATTGGGTAGAGGTA .....-...:..:....:..:..x........x.....x.................:..x........::..:.:..x........x.....:..x..:..x........:x..........:..x..x.....::.....:.x:.x.......... 5M1I151M 126/156 80.8% 157/94230402 0.0% 1/156 0.6% 130624125 59590430 +11646 chr4 + 190214555 183684983 183684982 183685410 428 AAGAGGTATTTATTATTATATCAAGTTTCTAAAACAATAAATGGGGGTAGTAGACTTAATTATAAGTACTTAAAATGTTTTTCCT----TCTTTCTTCATACTAGCTTCAACTCTGAAAGATGACCAGAAGTCTCGGATAGAAAAGAACCTCATAAATGTTTTAATGGTAGGTTGGAA-----TTGTTTATATAGAGTGTGTTATTAGGAATATGTGTACTTATATCTATATCAACTAATCCAAGTAGTGGTTTTTATTCAACTAGTTGAATGGATGTTAAC--TCTGTGTTGATGCAGAATGAAAGTCCTGATCCAGAACCCGACTGTGATATCTTAGCTGTGAAAACTGCTCAGAAGCTGTGGGCAGACCGAATTTCTCTGGCTGGCAGCAATATTTTCACAATAGGAGTACAGGACTTTGTGCCATTTGGTAGGTA chr4 - 94230402 53062100 53062099 53062484 41167919 41167918 41168303 385 AAAAAGTGTTTATTTTTA-----AGTTT--AAAATAA---------GTAGTAAA----ATGACATGTTTCTGTGTTGTAATCCTTGGTTTTGTTTTGTTTGCTAGCATCTACTCTTAAAGATGATCAGAAATCTCGAATAGAAAAAAATCTGATAAAAGTTCTAATGGTAAGTGGCAGATCTCCTATTACCCTCCCACATGTTCTTAAGAAGGGG---------GTCAGTGTTTAGTAACCTA--------TTTTTGTTT-----------------TTAACCTTCTGTCTGGATACAGAATGAGAGCCCTGATCCTGAACCTGATTGTGATGCTGCTGCAGTGAAAGCATCACAGAAGTTGTGGTCTGATCGTGTTTCTTTGGCAGGCAGTAATGTTTTTACAATAGAGGTCCAAGATTTCATACCATTTGGTAAGTA ..:.:..:......x...-----.....--....:..---------......:.----..x.:.x..x::.:x:x...xx.:.:.----.:x..:.x:x.:.....x..x.....x........:.....:.....:........:..:..x.....x...:........:..x.x.:-----:.:..xx:x.xxx:::....x...:...x:x.---------:..x:.:.:x.x...:.:.--------.....:..:-----------------.....--.....x.x...:........:..:........x.....:..:......:::x:x..x......:.xx.x......:.....x.x..:..x:.....:....x.....:...:....:.......::..x..:..:..::.:..........:... 18M5D5M2D7M9D8M4D27M4I89M5I32M9D19M8D9M17D5M2I155M 265/374 70.9% 385/94230402 0.0% 65/374 17.4% 130622883 59591672 +10745 chr4 + 190214555 183686594 183686593 183686753 160 ACAGCCCTTTTGTTTTATTTCTAGTGCAGTGCAAAGCCAAGTTTCATGCCCCAAGTTTTCATGTTGATGTTCCTGTTCAGTTTGATATTTATCTGAAGGCTGATTGTCCACATCCCATTAGGTTTTCCAAGCTCTGTGTCAGCTTTAATAATCAGGTAAT chr4 - 94230402 53063110 53063109 53063269 41167134 41167133 41167293 160 ACAACTTTTTTTCTTGTATTCTAGTGCAATGCAAAGCAAAATTCCTTGCTCCAAGTTTTCATGTTGATGTCCCTGTGCAGTTTGATATTTACTTAAGAGCTGATTGTCCTCATCCTATCAGGTTTTCTAAGCTCTGCATCAGTTTCAATAATCAGGTAAT ...:.::....x:..xxx..........:........x..:..:.x...:....................:.....x..............::.:.::...........x.....:..:........:........::....:..:.............. 160M 131/160 81.9% 160/94230402 0.0% 0/160 0.0% 130623484 59591071 +3225 chr4 + 190214555 183687236 183687235 183687341 106 CTTACTCCAATTTTTGTTTTCACTCCATGTTTATAAAGTCTTAA-GAATTCTCTGTGTGTGTGTGTATATATATATATATGTACACATATAGTATATATATACTTTT chr4 - 94230402 19559241 19559240 19559347 74671056 74671055 74671162 107 CTTATTTAACTTATTCCTTCTTCTGCATTTTTAATTTTTTTTAGCTATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt ....:.:x.x..x..x:..::x..x...x....xxxxx.:...:-x.x..:.:.x...........:.:...........:..:...xx..:.x.x.:....:.:.. 44M1I62M 70/106 66.0% 107/94230402 0.0% 1/106 0.9% 164127995 26086560 +3167 chr4 + 190214555 183687283 183687282 183687339 57 TTCTCTGTGTGTGTGTGTATATATATATATATGTACACATATAGTATATATATACTT chr4 - 94230402 19559291 19559290 19559347 74671056 74671055 74671112 57 TTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTATATTCTt ..:.:.............:.............:....xx..xxx.x.:.....x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 164127992 26086563 +9322 chr4 + 190214555 183691298 183691297 183691523 226 CCTGTTCACCTTTTTCAGGAATACAACCAGTTCTGTGTAATAGAAGAAGCATCCAAAGCAAATGAAGTTTTAGAAAATCTGACTCAAGGAAAGATGTGCCTAGTTCCTGGCAAAACAAGAAAACTGTTATTTAAGTTTGTTGCAAAAACTGAAGATGTGGGAAAGAAAATTGAGGTTAGTTATGAAATTTGTTTTAAAATATTTTTAATAATAAAAGTATGTTTAT chr4 - 94230402 53063757 53063756 53063970 41166433 41166432 41166646 214 CCCATCCTTCCACTGTAGGATTACAACCAATACTGTGTGGTAGAAGAAGCCTATCAAAAAAGTGATATCCTAGAACAGTCGTCACAAGGAACGATGTGCTTAGTCCCTGGTAAAACACGGAAGTTCACGTTCAAATTCGTTGCAAAAACTGAAGATGTAGGAAAGAAGATTGAGGTTTGTCAC----TTTATTTT---ACACCTTTCATACTG-----ATGTTTAT ..::.:.x:.:x:.x:....x........:.x......::..........x.x:x..:x..:...x:.::.....x.x::.x.x.......x.......:....:.....:......x.:..::.xx::..:..:..:....................:........:.........x..:.:----...:....---.:.::...x...x.:-----........ 183M4D8M3D15M5D8M 155/214 72.4% 214/94230402 0.0% 12/214 5.6% 130627541 59587014 +14355 chr4 + 190214555 183692947 183692946 183693740 794 TTTTTCTTTTTAGATTACTTCAGTGGATCTTGCTCTGGGCAATGAGACGGGAAGATGTGTGGTTTTAAATTGGCAGGGAGGAGGAGGAGATGCTGCTTCCTCCCAAGAAGCCTTACAGGCAGCTCGGTCTTTCAAAAGGCGACCTAAGCTACCTGACAATGAAGTTCACTGGGACAGCATTATAATTCAGGCAAGCACAATGTAAGTCTGCTTTGCTAAGCTGATATTAAAGGTCATCCTCTTATTTCTTTTGCTATTTTT-------TTTGGAGACAGA---------------GTCT-------------CTCTCTTGTCCAGGCTGGAGTGCAGT-GGTGTGATCACGACTCACTGTAGCCTTGACCACCTGAGCT----------------------CAAACCATCCTCCCACCT--------------CAGGCGCTA-------CCCTTGCCTTCCCCAGT-------AGTTGGGACTAC------AGCCAGGTGCCACCAT----------------GCCTGACTAATTTTT------------GTATTTTTTCTAGAGATGAGGGTCTTACTA---------------------------TGCTGCC----------CAGCCTTGTTTC------AAACTCCTGGGC-----------TCAAGCGATCCTCCTGCCTCAGTCTCCCAAAATGCTGGGATTACAGGCCTGAGCCTCTG---CACCCAGCCTCTTATTT-------------CTTTTAAATACTTTATTTGAATAAT----TTATTTGCTTTTTTTTTGATCAG-----------TTACT--------------TAGCTAAGGTTTCTTTTC-AAAGGATCATATCCAGAGTCCCAAACATTTCTGTACATCTGCTACATGAACCCCCTGCACTGACTAATGAAATGTATTGTTTGGTTGTGACTGTTCAGTCCCATGAAAAGACCCAAATCAGAGATGTGAAGCTCACCGCTGGCTTAAAACCAGGTA chr4 - 94230402 53064766 53064765 53065755 41164648 41164647 41165637 990 TTTTATCTATCAGATCACCTCTGTGGATTTGATCTTGGGTAGCGAATCTGGCCGATGTGTGATTCTGAATTGGCATGGAGGAGGTGGAGATGCTGCTTCGTCTCAAGAAGCACTGCAGGCAGCACGTTCCTTCAGGCGGAGACCCAAGCTTCCGGATAATGAAGTTCATTGGGACAGTTTGGCTATTCAAGCAAGCACTATGTAAG----------TAAA--AATGTGAAAACTTATCCTTGAGTCTTTTGTGAAGTCCTTATCACTGTCTAGAAAAAGATGGTGTACTTGTTGGGACTTCTTTAGTGTGAACTATCTTTGCATAACTGGAGTAAGATAGATACTGTCTTAATTCTTTTTGACTT-------CTGAGCTTCCAGGTAGCTAGAGGTACAGATAAACCTTACCCTGATCTCTGAGCATGCTAAACAGGCTTCAGTTCTGCCCCTCATCTAACTCTGTTAGGCAGACTTTTGACTTTTGTGCAAACCAGGAGCCATCATACTCACAAAAATGCACGCCCGAAGTATCTTTTGTTGGAAAATAATAATTATTAAGTAGGCTAACACCTAACTAGGTCTATTCAAAACAATTCAATCAGATTGCTGTTGGTGGGGGTACTTTCTTATTTCTTGGCAGAAAACCTGAACTATTAATGCTTTCTAGTGGGCTTTCAGTCAGTATTTTTAAAGTTGTTGCCATCATG---CTGCTTCTCAGAAATATTCTGTCTCCTAATTGAATAGCCCAGTAGTTGTCAGAACTC--TCTGAACAATAGGCTGTTTTAATCTCTTTTTAGCTAGGCTTAAACTCATTATTTAAGAAACATACAATAACTGAGTCTTTTCTCCTAAAGGATTATTTCTAGGGTGCCAAACATTTCTGTTCAGCTTCGTCATGAACCTCCTGCCCTGACTAATGAAATGTACTGTTTGGTTGTGACTATCGAGTCACATGAGGAGACAGTGGCCAAAGATGTTAAGCTTACTGCAGGTTTAAAGCCAGGTA ....x::.x.:....:..:..x......:.x::::....:.::..:x.x..xx........:..:.:........x........x..............x..:........x:.:........x..x..:....::x..x....:.....x..x..:...........:........:x.x::x.....:........x.......----------...:--:..:.x...:x.:.....:xx:.:.:..x..xx:.::..-------.:.:..:.x...---------------.x..-------------..x....xx.xx::.......:x::.-.:.::x:..x::.:..x:.x.::.:.-------.......----------------------:.....x.x.:.:x.:..--------------.....x::.-------....:::..xx.:.x..-------.x..xx....x:------.:.....x....:...----------------...:..xxx..:...------------:..x..x..xx:x..::x.:x::..x....---------------------------.....::----------.xx:...:....------:..xx....::.-----------..x..:.:x.:.:.x.:.xxx:.:.::x..:x..:..xx..:.::---...xx:...x.---:.::.x.:...:..x..-------------x..x.x.:x...:--.:....:...----.xx...:x.:.:.....::::..-----------...:.--------------..:..:..x:..:.:.:.-.......:..x..:..:..x..............x..x..x.xx........:.....x.................:...............:.:x....x.....::....xxx:::..:......x.....:..:..x..:.....:....... 206M10D4M2D39M7I12M15I4M13I26M1I26M7D7M22I18M14I9M7I17M7I12M6I16M16I15M12I30M27I7M10I12M6I12M11I45M3D11M3I17M13I13M2D10M4I23M11I5M14I18M1I156M 519/770 67.4% 990/94230402 0.0% 244/770 31.7% 130628181 59586374 +10067 chr4 + 190214555 183693911 183693910 183694726 816 TTTTAGGACAGGATGCCAATTTAACTCAGAAGACTCACGTGACTCTTCATGGAACAGAACTGTGTGATGAATCCTACCCGGCTTTACTCACTGACATTCCTGTTGGAGACTTACATCCAGGGGAACAGGTAAA----------CTTGGTC-----------------AACTGGGATTGAAGAGGAAATCAAT-----------TAGTTTGTAGTTTTAAATATAT--AGTGAGTTTTTAACAG-------TTCAGAGCGTTTTAACGCATATTCTAGGACTGAAAAAGTGA---------TTTAACTAAT----GAACATTTCATACAC--ATTTT------ACATACGTAAATGTGTAAAATGTCTTAAGCAGTTTTTCTACAAGGGAATTTAGAAAACATGCTTAACATGAATTAGTGGGCTAATAA-AATACCCATTGTTTGTAACTTAGTGCAGTTAACTTCTCAGTCAACTTCTGCTTCCAAACTAGATAGAAAAATATTTTGGA-AGTTAAAGAACAATAATTTCTAAAAGATGCAGTAGTAATGATCCCACCCTTATACTGTGG-------------CCACAGTG---TAATCAGAG-TACTCTACTACAGTGGGAGCATTGATGAGTTACATTGTAA-----------CATTCTGTAAAAGTGATAA-----AGAAT----------------TTAGCCAGTTGGTATAAATAAACT---CTAGAAGGTGGGAACATTAT---CCTAG--AATATATATCAAGAAGAAATGTCTGTAATACTAATTAAATTACAACATTTATTTTGTTACAGCTGGAAAAAATGTTGTATGTTCGCTGTGGAACAGTGGGTTCCAGAATGTTTCTTGTATATGTTTCTTACCTGATAAATACAACCGTTGAAGAAAAAGAAATTGTTTGCAAGTGTCACAAGGTA chr4 - 94230402 53067250 53067249 53068152 41162251 41162250 41163153 903 TCCTAGGGCAAGATGCCAACTTGACTCAGAAAACTCAAGTAACTCTTCGAGGAACAGATACATGCGATGACTCCTTTCCTGCATTGCTTCCTGATATTCCTGTAGGAGATCTGCAACCAGGGGAAAAGGTGAAAGCTTACGACCTTATTTCTACATCACAGTTAAGAAAATGGGACCAAAGAACAAAACATTCTTAGCATATTTAGTTTCCACTCTCCAAGCTGATAAATGAGATACTCATGGCATAGTTTGCACAACGTTT--ACTTGTAGTTTGGTATTCCTTCAACGAGATCACCTTTTTGGCTGATCTAGGAATAGGGCATATGCTGGTTTTGACGATACAGCTGAGAGGATATAAAATA----AAGAGGCTAATCT-CAACTG--TTAATAGAATTTACT-------AGCTACTGGGCAATTGATAATAATCAGCAAGTGTGATTCAACTTGGATAGAGAGTCAAATA--TGCAGATGCTGTACCAAATTGAGA----TTGTGGCTAGTTAATCAGAAGTTGGTTATATCATGTTACATGGTAACGATTCTTATCTGGCACTGTTAAATAGCAGATGATCAATAGGGAAGCAACTGGAGCTGTATTATTGTAATGAAAGTCTTTAT-----ACTCTGTGATTAAGGTCATGCACTTTAGGAGATTGTTAATGGTCAGAATAATATCCATTGTACTGTTGCTCTCTTGGTTCAGGTGAGATGATCTAAAATTTTGGATGGTTCTAGACCTAACTAATATATTTTAGG----------TATAGCATGGTTCATATTATTTCCTTTATTTTG---CAGCTGGAAAAACCAATATACATTCGTTGTGGAACAGTTGGTGCAAGGATGTTTCTTGTCTATGTCTCTTACTTGATCAACACGACTGTTGAAGGGAAAGAAATCCTCTGCAAATGCCACCGGGTA .::....:..:........:..:........:.....x..:.......:x........xx::..:.....x....x:..x..x..:..:x....:........x.....::.:..x.........x....:..----------...:x.:-----------------..x.....:::....:x...x..x.-----------......x:.x.:.:x..xx.:x--.:....x.x:.x.::.-------.x..x.:.....--..x::..x.:.:.x.:.xxxxx.::..---------...::..:..----...:.xxx....::.--:....------...xx:.x:.:x:.:......:----...x:.:.xx...-...xx.--..x.x.:..:x.:..-------.::..x.....x.x.:.-....x:..x::xx...:.:.:.::x::.x..:xxxx...:x:.--.x.x.x.x.::x..:.:..x..:.----..x...x-......xx.:x.:.x:x..x..xx.x:.xxx:.:....:...:.:xx:..x::.....x:-------------.x.:..x.---:..:::...-.::x:..:.::.:..::..:x..x..-----..x:...:.-----------..:.:.:x:.:.x..x...-----.....----------------..:x:.xx.....x:.::.:.:x.---...:..xx.x...xx:..x.---....:--.......x.:.:.----------.:..::.:x:x.:.x....:xx.x.........---............x::x.:..::....:...........x...x.x..:...........x.....:......:....x..:..:..:.......::........:x.:.....:..:...x:.... 133M10I7M17I25M11I22M2I16M7I12M2D27M9I10M4I15M2I5M6I22M4D13M1D6M2D15M7D17M1I43M2D24M4D7M1I60M13I8M3I9M1I26M5D9M11I19M5I5M16I24M3I20M3I5M2I13M10D33M3D126M 497/776 64.0% 903/94230402 0.0% 167/776 21.5% 130626661 59587894 +13383 chr4 + 190214555 183697483 183697482 183697843 361 CCCTTTACATTTTCT-TGCAGGATGAAACTGTAACAATTGAAACAGTCTTTCCATTTGATGTTGCGGTTAAATTTGTTTCTACCAAGGTATGTTTCTTTGAGGCATACTAGAAATCATTTAGGTTATAAAAATGGAC----TGAAATGATAAAATG-GATTAAGGTAATTCCTGACAGACCTTTTATCTTCATTTGTGACAGTTTGAGCACCTGGAAAGGGTTTATGCTGACATCCCCTTTCTGTTGATGACGGACCTCTTAAGTGCCTCACCCTGGGCCCTCACTATTGTTTCCAGTGAGCTCCAGCTTGCTCCATCCATGACCACAGTGGACCAGCTCGAGTCTCAAGTGGACAATGGTGAGTCT chr4 - 94230402 53068513 53068512 53068865 41161538 41161537 41161890 353 CTCCTTATGTTACCTATACAGGATGAAACTGTAACTATAGAAACAGTATTTCCTTTTGATGTTGCCATCAAATTTGTTTCCACAAAGGTATGTGTT-----------CTAGAAGTTGTTGGTATTATGGAATCACACCACTTTTAATAATCAAGCCCTGTTTAGTGAGAAATAGCCAGGTCTTGTGTTTGTCTT---GACAGCTGGAGCACTTGGACAGAGTTTTTGCAGATATACCATTTTTACTGATGACAGACATCCTGAGTGCTTCTCCTTGGCCCCTCACTATTGTAACCAGCCAGCTACAGCTGTCAGCTTCCATGACCTCAGTAGATCAGCTGGAATCTTATGTGGAAAATGGTAAGTTT .:.:...::..x:..-.:.................x..x........x.....x...........x:.:...........:..x.........x.:-----------......:.::..x:x:....::..x::x..----.xx...:..x..::x-x:..x..xx.:xxx:x.x...::...x.:.:.x:x..---.....:.x......:....x..:....x...x..:..x..x...:.::.......:...x..:.:.....:..x..:...x.............xx....:x....x.....xx.xx.x.........x....:..:.....x..:...:.x.....x......:...:. 15M1I80M11D30M4I15M1I37M3D170M 248/347 71.5% 353/94230402 0.0% 20/347 5.8% 130628970 59585585 +6383 chr4 + 190214555 183701676 183701675 183701813 138 TATAAAGACTTTTCCCTGTAGTTATCTTACAGACTGGAGAGAGTGCTAGTGAATGCTTTTGTCTTCAATGCCCATCTCTTGGAAATATTGAAGGTGGAGTAGCAACCGGGCATTATATTATCTCTTGGAAAAGGTAAG chr4 - 94230402 53070149 53070148 53070283 41160120 41160119 41160254 135 TAAACAAAATCTTGCTGATAGTTGTTTTACAGACAGGTGAGAGTGCCAGTGAGTGCTTTTGCCTGCGATGTCCTCCAGTTACTAATAGT---GGTGGAGTGGCAACTGGATGTTATATCATTTCCTGGAAGAGGTAGG ..x.x.:.x.:..x.:x:.....:.:........x..x........:.....:........:..x.:...:..x:.xx..:xx....x.---........:.....:..:::......:..:..:.....:.....:. 89M3D46M 98/135 72.6% 135/94230402 0.0% 3/135 2.2% 130631527 59583028 +5714 chr4 + 190214555 183704966 183704965 183705076 111 TCTTCTGCCACAGGACCTCAGCAATGGAGAATATCCCCATCATCACAACTGTCATCACTCTGCCGCACGTGATTGTGGAGAATATCCCTCTCCATGTGAATGCAGGTAGCG chr4 - 94230402 53070920 53070919 53071030 41159373 41159372 41159483 111 TTTTCTGCTGCAGAAGTTCACCTGTGGAAAGTGTACCTGTTGTTAGTACAGTCATCACTCTGCCACATGTGATTGTAGAGAGCATTCCCCTCCATGTTAAAGCAGGTAATG .:......::...:.x:...x.x:....:.:.:.x..::.::.:.xx..x..............:..:........:....::..:..:........x..x.......::. 111M 79/111 71.2% 111/94230402 0.0% 0/111 0.0% 130634046 59580509 +9375 chr4 + 190214555 183706794 183706793 183706968 175 TCTTTCTCTGTAGATCTGCCGTCATTTGGGCGTGTCAGAGAGTCGTTACCTGTCAAGTATCACCTACAGAATAAGACCGACTTAGTTCAAGATGTAGAAATTTCTGTGGAGCCCAGTGATGCCTTCATGTTCTCAGGTCTCAAACAGGTACAG----GTCATATCTTGTGATGCTTATG chr4 - 94230402 53071864 53071863 53072042 41158361 41158360 41158539 179 TTTTTTTCTAAAGATCTGCCATCATTTGGTCGAGTTCGAGAATCCCTCCCTGTCAGATATCACCTGCAAAATAAGACCAATTTAGTCCAGGATGTAGAGGTGTCAATGGAACCCAGCGACGCATTCATGTTCTCTGGCCTTAAGCAGGTATAACAATGTCACATTTCCTAACCCTTTTG .:...:...:x.........:........x..x..:x....:..x:.x.......::........:..:.........:.:.....:..:........::.x..x:....:.....:..:..x...........x..:..:..:......:.:----....:..:.:x.:.:x...x.. 153M4I22M 131/175 74.9% 179/94230402 0.0% 4/175 2.3% 130634930 59579625 +11581 chr4 + 190214555 183708379 183708378 183708616 238 TCTTTCTCTGTGACTTTTTATGATGCAGATTCGATTACGTATCCTCCCTGGCACGGAGCAGGAAATGCTATATAATTTCTATCCTCTGATGGCTGGATACCAGCAGCTGCCATCTCTCAACATCAACTTGCTTAGATTTCCTAACTTCACAAATCAGCTGCTCAGGCGTTTTATACCTACCAGTATTTTTGTCAAGGTAAAGC--TTAGCAATTTTCTGCTTTTTAAATTCAAAGTCTTA chr4 - 94230402 53072328 53072327 53072556 41157847 41157846 41158075 229 TTTTTCTC-----CTTTCTA------AGATCCGGTTAAGAATCCTTCCTGGCACGCAGCAGGAAGTATTATACAACTTCTATCCTCTGATGGCTGGATATCAACAGTTACCATCTCTTCATATTAACTTGCTGCGATTCCCAAACTTCACTAATCAGCTGCTCAGACGATTCATACCTACACACATCTTTGTGAAGGTAAGACTGTGAGAAGTGTTTTGTGTTCAAAGGCTACAGTCATA .:......-----....:..------....:..:...x.x.....:.........x........:.::....:..:.......................:..:...:.:........:x.:..:........xx....:..x........x..............:..x..:........xx::..:.....x.......::.--.x..x.:.x..:..:x..:x..:x::.x....x.. 8M5D7M6D177M2I35M 175/227 77.1% 229/94230402 0.0% 13/227 5.7% 130636051 59578504 +4122 chr4 + 190214555 183717264 183717263 183717366 103 CTCATAAAAGCTCAATGTGGTTTTAGGTACTC-TTATTATTCCCATTTTGAAGATGTGAAAGCTGAGGCGCAGAAAGGTTAAGTAACTTGCCCAGTGTTCTGGT chr4 - 94230402 10729167 10729166 10729267 83501136 83501135 83501236 101 CTCACAATACCCCTGTGAGGT---AGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGT ....:..x.x.:.x:..x...---.....x.:-:...:.x::.......:x..:..x....:.......:..x.x...........:........x..::x... 21M3D8M1I71M 73/100 73.0% 101/94230402 0.0% 4/100 4.0% 172988097 17226458 +3021 chr4 + 190214555 183722701 183722700 183722739 39 AAAAAAAAAACAAAAGAGGAAACAAACAAACAAAAAACC chr4 - 94230402 17429026 17429025 17429064 76801339 76801338 76801377 39 AAGAAAAAAACAAAACAAAAAACAAACAAACAAAAAACC ..:............x.::.................... 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 166293675 23920880 +3228 chr4 + 190214555 183733787 183733786 183733848 62 TTTCTTCCTTTTCTGCTTCCTCTTTTCCCCCTTCCCCCTTTTTTCTTTCCTCTTTTCTCCTT chr4 - 94230402 8439381 8439380 8439442 85790961 85790960 85791022 62 TCTCCCCATGTTCTGTTCTCCCTTTGCCCCCCTCCCCTCTTTTTTCTTTTTTTTTTCTTCTT .:..::.x.x.....:.::.:....x.....:.....::.....::..::.:......:... 62M 43/62 69.4% 62/94230402 0.0% 0/62 0.0% 175294406 14920149 +3330 chr4 + 190214555 183753090 183753089 183753159 70 CTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCTGCCACCGCG chr4 - 94230402 18197139 18197138 18197206 76033197 76033196 76033264 68 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:.:.......x.:xx...x.xx..........::.:.........:......x....--:....:.:. 59M2D9M 51/68 75.0% 68/94230402 0.0% 2/68 2.9% 165555951 24658604 +3192 chr4 + 190214555 183761704 183761703 183761756 53 ACAACAACAACAACAAAAAAAAAAAAAAAAAAGA-AAGAAAAAAGAAAAAAAAA chr4 - 94230402 12139748 12139747 12139801 82090602 82090601 82090655 54 ACAACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAA .........:......x......:.::.....x.-...:........::..... 34M1I19M 44/53 83.0% 54/94230402 0.0% 1/53 1.9% 171621956 18592599 +3223 chr4 + 190214555 183761704 183761703 183761779 76 ACAACAACAACAACAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAAATAGCCATGTGCCACGCACCTAAA chr4 - 94230402 12139751 12139750 12139814 82090589 82090588 82090652 64 ACAACAGCAACAACAAAAAAGAGGAAAAATAGAAGGAAAAAGAAGGAAAAAAAT------------CACACCTAAA ......:.............:.::.....x.::.:::....:.:::........------------.:........ 54M12D10M 49/64 76.6% 64/94230402 0.0% 12/64 18.8% 171621953 18592602 +3148 chr4 + 190214555 183761709 183761708 183761761 53 AACAACAACAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAAATAGCC chr4 - 94230402 56710769 56710768 56710821 37519582 37519581 37519634 53 AACAACAACAAAAGAAGAAGAAAAAAAGCAAACAAAAATCAACAAAAATACCC .............:..:..:........x..:x.....xx..x.......x.. 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 127050940 63163615 +3307 chr4 + 190214555 183761718 183761717 183761829 112 AAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAAATAGCCATGTGCCACGCACCTAAAGTCTCAGCTACTTAGAAGGCTGAAGCTAGAGAATCTCTTGAGCCCAGGTG chr4 - 94230402 2781194 2781193 2781300 91449103 91449102 91449209 107 AAAAGAAGAAGAAAAAAAGAATGAAAGAAAAGAACAAGATAGCCATGACTCATGT-CTTG----TTCATTACCTTGGAAAGTTACAATGCAAGATTCTCATAAAGCCAAGTG ....:..:..:..........x....:..:.:..x..:.........xx:..:.:-.:.:----:...x:xx...:...:.:.:x.::xx:...x....x.:.:x...:... 55M1D4M4D48M 70/107 65.4% 107/94230402 0.0% 5/107 4.7% 180980524 9234031 +3599 chr4 + 190214555 183764870 183764869 183764964 95 CTTATAAGAACCTTCTGAGATAGG-AATGTGTCTTATCCCTATTTGACAGATGAGAAAACTAAGGCCAAAATCGATTAAGTATTTTGCCCTAGGTC chr4 - 94230402 10729167 10729166 10729262 83501141 83501140 83501236 96 CTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC ..:.:..x.x..:.x....:....-...xxx.x.:.x.:.:....x....:..:.......:....xx.x.:x.:.......x.......x::... 24M1I71M 66/95 69.5% 96/94230402 0.0% 1/95 1.1% 173035703 17178852 +3203 chr4 + 190214555 183780732 183780731 183780792 61 CTCCCATGTTCAAGAGATTCTTGTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.::x.......x.x...x::x.x........::.:.........:......x...... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 165583593 24630962 +3239 chr4 + 190214555 183781719 183781718 183781814 96 CAGTTTTATTTCTTTTCTGTTTTTTGTTGTTGTTGTTTGTTTTTGTTTTTGTTTTTGAGATGGAGTCTTGCTCTGTTGCCAAGGCTGGAGTGCAAT chr4 - 94230402 17488382 17488381 17488473 76741930 76741929 76742021 92 CAGTTCTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTGGTAAGAAAGGTTTCTGTGTAACTA----TGCTGTGCAAT .....:.:...x...xx:x..................xx.........x.x.x....:x.x.:.:xx..x..x...x:.:.----..xx....... 81M4D11M 66/92 71.7% 92/94230402 0.0% 4/92 4.3% 166293337 23921218 +19520 chr4 + 190214555 183797515 183797514 183798152 638 GGCTGCGCCCAGGGACTGCGCCGGGCGCCCGGGCTGCAGGGACGCGGGCG---CGGGGGAGGCGCGGCC-AGCCCTGCCCTGGGGGACGGTCGCGCTCCCCGCTGGTCTTGCAGCC----ACGTCCCGGCGGCTGTTCCTGGGAGCGGCGGGAGGCGGCCTCGGTGAGCCAGGTCGGCGCGGCAGATGCCTGGGAAGATGGAGAAGTTTCTGCAGATCGCGCCTCACTCCCTGGCCATCGTCCTGGGCCC---GGCAGAGGCGCCGGCGGGGGAAAGGCCAGGGGCAGCCCGGCCCGCGCCCCCGGCCCAGCCCCGCCAGCTCGCCCGGCACCACATCGGCTACGAGATCTTCGCCGACTTCAAAGCCGAGAACATGCAGCACTTCTGGAACAAGAAGGTCACGGCCGCGGTGGCCGAGACCTTCTTCCTGGGCTGGATCGACGAGCAGGTCCTGCTGATCCAGGGCAAGGAGGAACATCTGGAGGCGCTGCGCGAAGGCTGGACGCGCCGGGCCCTGCGGCCGCCCTCGGGCTTCCACATCCGCTGCCTGGGTGAGTGCGACCGCCGCGCGCCCGTCC----CGTCCCTTCCCACCGGATCGCGTCCGTGCCGTGCGGTCGCGGGTGCCCCGCCCTGCCCCAGCCCGCCGCG chr4 - 94230402 53085492 53085491 53086067 41144336 41144335 41144911 576 ggcccggcccggtggcaggacggggcg---gggttg---ggccggaggtgtaccgggggcggagcggccgagccgtgcc---ggggccg-----------cgttagga--gcagcccggagcggcacggcg--------tggt----gcgggaggtggc------ggggcatgccgg-gCGGCC-ATGCCGCGCCGGCCGGAGCGGTGCTTGCAGATCGCCCCGCACTCTCTCGCCATCGTCCTgggcgccgaggccggggggcggccggcgg---ggccggggg--gcgcggc----------gg------------AGCTGGGCCGGCACCGCATCGGCTACGAGATCTTCGCGGACTTCAAGCGGGAGAACATGCAGCACTTCTGGGACCAGCGGGCCACGGCGGCGGTGGCCGAGACCTTCTTCCTGGGCTGGATCGACGAGCAGGTGCTGCTGGTGCAGGGCAAGGAGGAGCACCTGGAGGTGCTGCGGCAGGGCTGGGCTCGCCGCTCCCTCAAACCCCCCAGCGGCTTCCACATCAAGTGCCTGGGTACGTG---CCGGGGAGCGACCGGTCGGGACGGGACCCCCCCGCGGGGCGACCCCGC----TGCGGGCGCTGTCCCCGCGTACAGCCCT-GCCCGCTGTG ...:xx....:.x.:.x.x:.x.....---...:..---..x..x:..:.---......x..x......-....x....---....x..-----------..:.:.xx--......----:..x.x.....--------...x----........:...------.:.x..x.:...-.....x-.....xx.xx:.x:....x:..x::..........x..x.....:..x...............x.---...x.:..x..x.x...x..---....:....--..x....----------..------------....x.x........:.....................x........:xxx.....................:..x..x:..:......x............................................x......:.x..............:..:.......:......xx.:......:.x.....xx....xx::..x...xxx............x:x.........:x...---...xx.x...x...x:.----..xxx.::...xx...:x..xx:...:----.....x...x.x:x..x..:x.x....:-......:.:. 27M3D6M3D11M3I16M1I9M3D7M11D8M2D6M4I11M8D4M4D12M6D12M1D6M1D65M3I20M3D9M2D7M10D2M12D241M3D17M4I27M4D28M1D10M 432/561 77.0% 576/94230402 0.0% 92/561 16.4% 130712023 59502532 +3157 chr4 + 190214555 183821914 183821913 183821989 76 TCTATGTCCCCCACCCTGCCCTTCCCTAAAAAGGACGCTTGTGTGTGGAAAAGGTGATACAGTTTGTGTCGGGTCT chr4 - 94230402 5349922 5349921 5349997 88880406 88880405 88880481 76 TCTCTCTTCCCAACCTTTACCTGCTCTAAAAAGAGAACTGGCCTGAGGAAAAAGTGATACAGTTGATCCTGAGTCT ...x.x.:...x...:.xx...x.:........::x:..x.:x..x......:...........x:.x::.:.... 76M 52/76 68.4% 76/94230402 0.0% 0/76 0.0% 178471992 11742563 +3244 chr4 + 190214555 183843139 183843138 183843198 60 CTCCATCTCAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAATGTTTTTAAAA chr4 - 94230402 64294991 64294990 64295050 29935353 29935352 29935412 60 CTCCATTTGTAAAAAAAAAAAAAAAGCAAAAGAGAAAGCAAACTAAAACTACTCTGAAAA ......:.xx................x......:....x...xx....x.::.:.x.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 119548148 70666407 +3342 chr4 + 190214555 183860393 183860392 183860478 86 ATGCTGCCAGCTGGCTTAAAACAAAACAAAACAAACAAAAAACAAAAAACAAAAAAAAAAAAAAAAGAAGAAAAAGAAGAAAAAAT chr4 - 94230402 7940263 7940262 7940348 86290055 86290054 86290140 86 ATGGTGCAGATGTGTCTCAATCAGAGGAAAATGAACAAAAAACAACAAACAAGGAGAGGAGAAACAGAAAAAGAAGCATAAAATAT ...x...x:::xx.::.x..x..:.:x....::............x......::.:.::.:...x....:..:...x.x....x.. 86M 57/86 66.3% 86/94230402 0.0% 0/86 0.0% 175920130 14294425 +3034 chr4 + 190214555 183860411 183860410 183860471 61 AAACAAAACAAAACAAACAAAAAACAAAAAACAAAAAAAAAAAAAAAAGAAGAAAAAGAAG chr4 - 94230402 67219263 67219262 67219323 27011080 27011079 27011140 61 AAGTGAAACAACACAGAATATCATTAAAAGAGAAGAAAAAAAGAAAAAGAAGAAAAGGAAG ..:::......x...:.xx.xx.x:....:.x..:.......:.............:.... 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 116641148 73573407 +3228 chr4 + 190214555 183860411 183860410 183860472 62 AAACAAAACAAAACAAACAAAAAACAAAAAACAAAAAAAAAAAAAAAAGAAGAAAAAGAAGA chr4 - 94230402 78791797 78791796 78791858 15438545 15438544 15438606 62 AAACAAAACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAA ....................xx:x.x...::x..........:.:.:...:::...x...:. 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 105068614 85145941 +3017 chr4 + 190214555 183874936 183874935 183874974 39 AAAAAAAAAAAAAAAAAATATATATATATATATATATAT chr4 - 94230402 69437739 69437738 69437777 24792626 24792625 24792664 39 AAAAAAAAACAAAAAAAACCTATATATATATATATATAT .........x........:x................... 39M 36/39 92.3% 39/94230402 0.0% 0/39 0.0% 114437197 75777358 +38016 chr4 + 190214555 183906245 183906244 183908281 2037 CCCACGCCTCGCGCTGAGCTGCCCGGCGCGGAGGGTCTGCCGCCGCCCCTCC-GGCCTCCCGCACGCCCGATCCCGGGTCAGCCCCGGAGGCCTCGG---CTGCCTCATTTGTTTGGGTCTTTTGTGCCGTGGCTCCCAGTTGGCCAAGCACTCCTGCGCTGAATCGGGCCATTGTCTGCGCTCCCATTGCCTTCACGCTGCAAGTCTCGGCGCCCCCACCCCGCCCGCCCCCTCC-------CCGCCTCCTCCC---------------------------------------GGCCGGGGAGCCTCCTAACGTGCCTTTCCCCC-CAGGAATCTGGAAGCTATAAGCCGGGCGGATTGCAAATGAAGTGTAATGCATTGTGGGACGTGTGTAAAATCGGAGCCTTCGCCGTGGGGGTGTGGGGGGGCGTGGGGAGGGCCGGACC-CGCCGCTGGCGGTGTAGACGCCGACGAGGAGGGGCTGGGAAAATGTGCGCAGAGTCCGCCCGGGTCGTGCCCGCCGTAGACGGATGAAGGAGCGCGCTGCGCCCCGGC----GCTGAGGCCCCGAGGATCGGGGCGGCAGGTCGCCCTCCCCACCATGAAGAAGACCCGGAGCACAACCTTGCGGCGAGCCTGGCCTAGCTCGGATTTCTCGGACCGGGCCTCGGACCGCATGAGGTCCCGCAGCGAGAAGGACTACCGCCTGCACAAGCGTTTCCCCGCGGCCTTCGCGCCCCAGGCTTCGCGGGGCTACATGACATCAGGTTGGTTGGTGACCGCGTTTCTGCCCCCGGGCCGGGGCCGCGGGACGTGCTCGGTACGCCGCGGCCCGGGTGCTTGGAGGAGAGGACGGGCAGTGATGGATGCGATAAGTTATGGGGAAAGCAGGAAAAAA----TTAGCTCCCATCCACCATTTTGTACCTC-CCAAGATCCACAGC-AGGCCCTCTCAATATGGGGTTGGAGAGCTATTAGTTAGGTAAAACGAGGGAGGGGGGACGAGCCGGGCGTTTTGGCTGCAGGGAGATAAATGACTGCAAGCCCCGGCGC------TGCAGCCTCCT-CGAGCTTTGTG-GAGGATCCTGCGCCCAGG-------GTTGCCTGCAGTGCCAGGCTTGCTGGCTGCTGCATTGTG------------GCCGGTTA-TCT-------------GAGTGGGTATTTCCAGCAGCCC-CCTGTTCTCCAAAAGGAACAGGTTCCATGCGCAGCTCTGGATGGGCTGAGTCAGGGGAGAGTCCTG-----CAGACATC--------CCAGGCTGGTCTGATTTGCACGCAGAGAACTGTGTTGGAGCTTAC-----TGAACGCG-TTCTGT---------------------GGGGGTAATGGTGTGGATGCGGATTGAATGCTCACATGATTCTGTGTGGATTTAACATATGTTGCT-TTGAATTAGGCTGTATGGAAAGAATGGAGGCTGTATCA-TGTGTTTGCATGTCAGACAGGAGGGACAAACA--AAACGGTAAAT------GGAAAGGGAAGGCTTCAAAAAAGATTTCCGCTTAAAATGCAGTGCTG---------TGAAAAGCCTTCCTGA-------AGGAGCCAGTTCTTTTTTTGGAAATACAACGGAATGGCTTTGGTTTGATTTGGG--------AACCCAGGGATGAAATTCTTGAGGGAAATGCTGAAGGAG-----------------GAAAAGCCTGGAAACCTTCCGTTGCCTTCTCCTTACTTCTCCTTA-ACCACTTGGATGTAATGATGTGT---------AAGGCATCGGTTCTTA----------TTTATTTTTCATTCAGAGAAAAATTTAGATT-----------TTCTTCT-------AAGCACACTGTAATGGAAGAACCGAGATTTTATTTTAAACCACATACTGTACCAAATCACTCTGAGCCCTGTCTTA----------------------------------ACTGGGAAGATC-ATTTTAAGCTTGTGGTTGGTACTTACAGTCTAGCTTTACTCTTTTTCTCCTAAAACAGCAAGTCCTTTTTAACTGGGGTCAGCATCTCATGCTTCAAAAATGCCTTGCGACCGCATTTCCACGAACATAAAGCCGAAATAAAAGAACCATCTTTTTTATTGCAAAGTCAGGCGACATAAGGATGTTGTACTATTTTGGCAATAAGGCTCCCTTGATTTT-----------CCCTTTCATGAAAAGCCAAATTCGTAAAGAAAGTGACAACTACAGTTTATACTTCAGTCATTTAAG chr4 - 94230402 53150477 53150476 53152667 41077736 41077735 41079926 2191 cctcctcctccCGCCGTGCCG-----------GGAGCCGCCGCCGCCTCTCCCAGCGCCGGGCGCGCTGCGATTCGGGTCACAACCGGCGGCCGTGGGGTTTTCCTCGTTTGTTTGGGTCTTTTGTGTGGCGGCTCACAGTTGGCTAAGCACGGCTAGGCTGAATCGGGCTATTGTTTGGGATCCCGGAGCGTTCACGCTGCAGATCTC----CCCCCTCCCCttttttccctttctttttttccgttttctttttttttttcttttttttttcttttttttttttttttttttGCCTGAGAAGCCACAGAATGTGCCTTTCCTCCTCACGAATCTGGAAGCTGTAAGCCGGACTGATTGCAAATGAAGTGTAATGCATTGTGGGACGTGTGTAAAATTGGATCATTCG-----AGGGGGAGAGGGAAAAAAAGAGCGGCCGGGCCGTGCCGCCCGCGCCCTAGA---------GCAGGCAGCGGCACCATGGGCGCAGGCTgcgccccggcggcgccggcgcTGGGCTGACG--GGAGCGCCGCGAGGCCCGGCCCGTGCTGCGCTGCTGCGG----GGGCACCGCTCGGGCATCCTCAGCATGAAGAAGACGCGGAGCACGACCTTGCGGCGGGCCTGGCCTAGCTCCGACTTCTCCGACCGGGCCTCCGACCGCATGCGGTCCCGCAGCGAGAAGGACTACCGGCTGCACAAACACTTCCCGCCGGCTTTCATCTCGCAGGCGTCGCGGGGCTACATGACATCAGGTTGGTAG-------------CACCGCCGG--CGGGGCTGCGGGGTGCGGGCGTGCGGCTGCG----GGGAGCCTAAAT---------------------TGCTATGAATAATGCAAAAAAAAAAAAAAAAAAGGATAGCGTACATCCACCATTTTGTACCTCGGCAAGATTCACGGCGAGGCCCTCGCAATATGGTGTGTAAAATCTATTAGGCGAGTGAAATAAGGCAGGGGGGAACGGTCACGTCTCAGCGCCGCGGAAGGGCAGGCGGAGGCGAGCGGGCGCGCAGAGCGTGGAGCCCTTTGCTCCTTTTGTGCTGGGAGCATGTGCTGGGGATCTGCCGCTGCACGCTGCGCTTGGGATGCAGCTGGCCCCGCTGTAACACAGCGCTTCGCCCGTTAGTCTGCTTGCGAAGGGAGAAGGGTCACCTGCCGCGGCCAGCCTGCCCCTCGTAGGGA------------CACGGAACCGTGAAGGCTG-----GAAGAGAGCTTTGAGATCCAGCCGTCCGCTAGCACCTGGCCGG---GCTCCGGCTGCGTGGTTCTGCTCTGGTGCAAATGAGTGTAAACGCGTTTCCGTTCGGCATCGGAGGTGCAAAAGGGGAGCGGAGCCGCGTATGCGGGC--AGCGCACACGTGCGCCTACGCTCCTCTGGC---CGTCGCCGTCGGGGGAGGCCGTAGGGAAATAATGGGCACTGCAGCAGTGTGTTTGTGCGTGGGGAAGGGAGGGCACGCACCAAACAAAAACCAGCGCGGGGAAAGGCGGGCATCGGGAGAGG-CTCGGCCTCGGCTGGAGCGCTGCTGCGATGTCGGAAAGCCTCGGTAACGTTGATGGGAGCCG---CTTCATCCCGAATAGCATCCGCACGGGCTCGG---GATTCGGGCATTCCATAAACAGCAGAAGGAAGACTTG-GGAAAACGCTGACGGGGAGGGGGACGGGGGGGCAGAAAATCCTGGAAACCTCCTTTGTTGTTCCGCTGCCTGCTTATTGTGATGCTCGGACATAACGTTTCGTTCCCACCGCATCACATCGTAGCTTATCGCGAAGGCTCCTTTTTCCCTCTAAGGCTCGATTTAGGTTGAGTAGGCGGATTCCTTTAAAGGAGAAAAAGAGGGAGAGGGAGAAAACGAAAGGTATTTTTCGTGCAT-TACTGAA--AAACGTTTCCGACCCCCCCCCCNNNNNNNNNNCCCCCCCCAACCCCCCCCCATTACTGCTGCAAAGGTTGAGCCAAAGATTGTGGCTGTCAGTTACACGCTGGCTTTGCTCTCTGTGTCTCTAATAAACATCTCTCTTT-------GGT-----TCTCATGCTTGGAAAAGGCTGTGTGTCCGCTCTCCCGTTAACCTCCAGGCAGAAGGGGAAGAACACGCATTTCACTGCAAAATCTGCCCACGTGAGAAAACCGTGCCATTTTGGCAGTA--GCCCTTCTGATTTTTTTTTTTCCCCCTCTTTCCTGGGAAGCCACGGATCGGGAGGAAATGACAAGTGTGATTTATGCTTGAGCAGCTGAAG ..:x.x....x...:.x..:.-----------..:x.:.........:....-:..x:.xx..:...:xx:x::.......xxx....x....x:..---:.x....:...................:x.:.....x........:......xx..:x............:.....:..x.x....:xx..x...........::....----.....x....x:::x:...:.:.-------...::.:..:::---------------------------------------.x.:.:.:....x.xx..:..........:..-..x.............:........:.x...........................................:...x.x....-----:...x.x.:...::x:x::.::x......:..-:.....:x...x:x....---------.x...x:x:..x.xx...x......:x.x.....x..:x.:...x..xx.:.:.x..:.--.......xx:.x.x......----....x.x:x.:.x..----....:x.:xx:x.x.x...:..x............x........:...........:..............x..:.....x...........x.........x.........................x........:.::.....xx....:...::x:.x.....x............................x.-------------::..x....--......:.....::.:.xx..xxxx..:...----...x..:.::.x---------------------...x..:.:.x...x::...:x.::......----x....x:x....................-x......:...:..-........x........x..xx:.:.x.......x:::..:...::...x........xx:.:.:x.:x.:xxx..:..:.:::.::.:::.:xx..:...xxxx....------..x....:::.-.xxx:......-x:...x.x..:..:x:..-------.:...x:..x.:..:x..xx...x.x:x..:x.::...:------------...x....-...-------------..:x..x:.::.x.x..:...x-....::.::.:x.:...------------.:.:.xx.:.x:x:.....-----.::.....:::..-----...x.:..--------..x...:..---.x.::.xx:..:x:.xx...:x:...x..xx.:-----.:......-...:..---------------------...:.:::x.x:.:.x......::--.::..x...:..xx:..::.:xxx.:.::.---:..:..:-.:.::xx....:...x.....x.....:x:...:.x..-........:::..x:.:x...::..:..x:..--....::x..x:------..:..:..x:...x..:::.:..:-:..x..:.x::x..x..:....---------:.:.......:xx.:.-------:......:---...:x.::x...xx:..x.x.x.:..x:.:..---....:...--------..x.x:x:..x.:..xx....-..:...:.....x..:.-----------------.....x...........:.:x.xx:x...:x..xx..x..:x..:-:x::..:...::...:.x.x:..---------.xx:.....xxx....----------.::x....:.x.::.::.xxx:......:..-----------...:.:.-------..:x.x.xx.x:.x...::..x...:.xx.xx....x:xx..:-.....x.--...:xx:..:..x...:x:.::X----------------------------------:...x:...:.:-.x::x...x......:..x:.x.....xx..:.....:....:.x.x..::x..xx.:..xx..::...-------...-----..........x:....x..:x..:.x....x:.:..::x...x.xx..x.::..x:::.::.x..:x:x...:.:......:..x.x.x..:.:..:.x:::..:.:.........:..--..:.:::.......-----------.:.....x..::......x:xx:xx::..:..:......x.::::.....:...x..:x::.x... 21M11D20M1I44M3I109M4D23M7I12M39I32M1I82M5D32M1I18M9D59M2D20M4I15M4D198M13D9M2D31M4D12M21D31M4I28M1I14M1I109M6I11M1I11M1I18M7I39M12I8M1I3M13I22M1I17M12D19M5D13M5I8M8I9M3D33M5I8M1I6M21I24M2D30M3D7M1I38M1I32M2I11M6I24M1D22M9I16M7I8M3D32M3D8M8I21M1D17M17I45M1I23M9I16M10I31M11I7M7I43M1D7M2D23M34I12M1I69M7D3M5D119M2D14M11I66M 1262/1911 66.0% 2191/94230402 0.0% 404/1912 21.1% 130755768 59458787 +6688 chr4 + 190214555 183909779 183909778 183910144 366 TTCAAACAGTCTTTTCTCCACGAATAAGTAATTACCAGTGTGAAATGTGATTTATAGCAATAGGC-TTGACATTTAGCCTTGGCCTTTCCGATACCTTCAGGATAAACTACACTTAAGCTCAAGAGGTTAGAGCGGGCACC-------------TATAAACTAGCGAGCTCTTG-CAAA--AGGACAGTTAGAGA--------------------ATGCTGAAACTTTAAGTCTCGAAGACTATGCCTTATGTGACTGTT---TAAGCTCCCAACTCATGCTACCAAATCTGAAGAAATCCTAAGAATTCATGAGCTTCCTAGCAACCAGTAAGTTCACAGGCCATGAGATGACTTCATTGTTCATCTTGAATATTAATTTCCCAGTGGTGGTTT---CTGGGCAGAAA chr4 - 94230402 53153789 53153788 53154189 41076214 41076213 41076614 401 TTTAAGCAGCACTTTCGGCGAAGCTGAGTAAGGACCAGTTTGATGCTTATTTGACAAGAAGCGGCACTGCTGGCTGGCAGTCACGTTTTCAATACTTCAGGAACAAACTGCCCATAATTACAGAAGATTGCTGCGGATGCCGTTGCAGTTCGTGTGAAATCTAGAGATTGTTTGACAGATCAAGGCAGATGGAAATAAGGAGGGGGGAAAGGAAAAGGCAGGGAATTTA------GAAAATCACACATT--TTTACTGTTGAATAATCTCTTGATACGTGCTATTAAATGTGCTGTACTCCAGGGTTCCTTTAGGCCTCCTAGCAACCGCGAGGTTCAAAGGCCATGCGAGGAGTTCATTGTTCATGCTGAATATTAATTTCCCAGCGGAGGGCTGACTTGGGGAAAAA ..:..:...:x:....xx.:x::x.:.....xx......x...x::x.:x..x.:.:x..xx...-:..x::x:.:..xx.x:.x...:.:....:.:x:.:.:.....:.x.x...x:x..::..:..:xx....:::..-------------.:x..x....x..x:x:...-..:.--.:.:...x.:..:.--------------------.x..x.::.x....------...:.::.::.x..--x.x......---...x...:::.:x.:.....::....x..xx.x.x...x::.xx:::x.::..:...........:xx.:.....x........x..x..x............x:..................:..x..x:.---:....x.:... 65M1I75M13I20M1I4M2I14M20I14M6D14M2D9M3I132M3I11M 225/358 62.8% 401/94230402 0.0% 51/358 14.2% 130755990 59458565 +3705 chr4 + 190214555 183926681 183926680 183926779 99 TGGCACAATATTGGCTCACTGAAACCTCCACCTCCCGGGTTCAAGCAGTTCTCCTGGCTCAGCCTCCCAAGTAGCTGGGACTTGGCACGCGCCACCATG chr4 - 94230402 18197114 18197113 18197206 76033197 76033196 76033289 93 TGGCATCATGTT------CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG .....:x..:..------..:x.:..:xx.x..:.:.........::x...x.xx..........::...........:...xx:.::..:....::.. 12M6D81M 64/93 68.8% 93/94230402 0.0% 6/93 6.5% 165729567 24484988 +3072 chr4 + 190214555 183968325 183968324 183968371 47 TGCACACATGCATATACCTACACACACACACACACACACACACACAC chr4 - 94230402 14964838 14964837 14964884 79265519 79265518 79265565 47 TGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .......:..:..:..:x....xx........::............. 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 169003487 21211068 +21023 chr4 + 190214555 183987581 183987580 183988869 1289 GTAAGCGCAGGAGAGGCTCCTGCTGAGAGCGAGCTCCTGACATAGTGACCTCATTCCCCACGCCGCCCTCCTCGC----AGCGGCAGAAGCCG---------CACTGGCT----------GGTGC------------------TGGGTGAGCTCCACCGCTGCCCGGGCTGCGAGCCTGACGGCTGTGTGTCGGGAATGACGAGACCCAGGCTTGCAAAGACTTG--CACGGCAACTGGAATTTATGACAAATAGCTCACTGCAGCTAAACTTTGATACAGTGTACAGTAGAACCGCCTGTTACACACAGGAGGGAGACGCGTCCTTCG----TCACCATGCAAAGCCAGCCTTAAC---------ACAACATAGGAAAATGTGGCAGGTCTCTAATTACGGACTGGTGAGTATATGACGCCAGATCAATTTTAATGTGTGTGTTC-------------TCTCTTCAAGCATCTG-----------------GAGGTATGTGCCCTTTTTA---------------------------CCTTTTTCATGATTAAAAAAATA------TGAGTTGG---TGCTAATGCATGGGAGGGGAC--CTGGGCCCCTTGGAGAGGAGAGTGTGCCCCTCGCCACCCCGCGC-------CTGGGGTACATTCT-GACCTCGCGTCTCCGCACTGCACAGACAAAGGAGCCTGCACAGACAAACAGAG----------------GCTGTAGCTTTTCTTGGAGCGATGACTCATTTCAGTTCACAAAGGATTCTGGGCAGGGCAGTGAGAAGTCAGGTTGGCTGATCCGTCCCTGTGACTTCACTTTGCAGAGAA-CAAGCAGAAGAGGAGTGACACTGCAGATTCC-GAGGCACTGCAGTGGGATGTTGGCT--------CAGCAAGTGGCTGTGATGTACGGGATAGGCATGGAACAGGATTCCAGCTGTTCCATGCAAATAGGATAAAAGAATGGTAAAGAGGATTCCTTTTTTTTTCCCTCCTCAAAACGTTACCAGCAAAGTACATTCACAGAGCCTTTTTAAGGTGCCTTTTGCCAGCTTTTGAACTGAACTTGT--ACCA-GTATCTCAAGCCCTGAATTGTAAGAAGAGCTGAGAGTT--CTGGAACTCATTTTTAAAAAGTAGATCTACGAAGGTAAAGTACCAGATTCCTCTTGTGTTCCACGGGCCCTCAGTAGCCAATCT----GAAATGCTCATTTAGGATACTATGACTTGAAACTTTACTCT-TTCTTCTTATTCCAGATTCTAGGACGTCCGTTTCTGTTACTGGCTCCTTCTTGTGCTTGGATGCAGCTCCCTAGCATGCACCAGGCTTTAGCGTCAGTGCTAC-------------CTGGGGGATGGAGCCAGTCCAGAAAGGGCCAGGTAGGTTTCCCCTGCTTTTATTTCAACAGTTGTTGTGTGCAAAGGAATATGG chr4 - 94230402 53189754 53189753 53191155 41039248 41039247 41040649 1402 GCAAGCAATGGAAAACCTAGCACTGGGAGTGAGATGGTGACACAGTGACCTCGTTCTGAGCATTACTTTCTTTGTCAGGAGCAGCAGAAGCTGAGGCAGCTCCGCTGGCTCTCAGCACTTGGAGCAGTTTGACGTTTTCTGCCTGGCAGGGTTTCAGGGCTCACTTTGTTGTGAGCCCAAACGGTGAATG----GAATGATGAAAAACGAGCTTGCAAGAACTTGTCCACTGCT-TTTAATTTTTTGATAAACAGTT-GCAGCAGCACAACTTTGATCCAATGTAGAGTAATGCTGTCTGTTGCGTGCAGG--GCTGCAGCATTCCTCGGGACTGACAAAGGAGAGTAAGTCTTTTCTTTGAATAAATAGAATAAAAATCAGTGTCGTGT-TCAAATAGCGAATAATTCAGGAAAATAC---AGCTCtgtgtaagtgcgtgtgtgcgtatgcatgtgtgtatgtctgagcatttgtggttttgtgtgttgtgggggtgtgtgtgtgtgtTAAATCAGGGAGAGATGTTGGGGGTACGTTTTTTATCCTGACCGGAGGGTTAGAGCTTTAACTTGTCTTTGCTAATGCATGTAAATAGCTTTCTTGCCCACTTAACGAGGAGGCTGG----CTTGTTATCCTGTACAATGCAGCTGGGCACGGTTCCAGAAGCAGAGGCACTTCGTTTCAAAGACAAAGAAGCCAGCGCAGACGTAGGGAGAAACCTGGAACATTGCGCGGTGGATTTTTTCAGAGCGATGACTCATTTCAGTTCACAAAGGATTCTGGGCAGGGTAGTGAGAAGTCAGGTTGGCTGATCCATTCCTATGACTTCACTTTGCAGAGAGCCAGGCAGAAGAGGAGTGACACTGCAGAATCCTGAGGCACTGCAGTGGAGAGGTGCTTTGCTAAGACTGTGAGTGCCTTCGAAACAGGGGGTGGTGTCAGAGCGGGATTCCAGCTGTGCCGTGGAAATGGGGCAAA--AAGGAGAGAGATGTTT-----------------TCAAAACACCGTGTGGGAGTTGTATTTGTAGGGCCCTTTAGA----TTCTCTGCTTCCTCCTCCCCTTCGTTTCTTAACCATTTATTTCTTGCGCTTACGTG-----AGAATTAAGTGTGAAATGGCATTCCCTTC-----AGTGGAGCTGCACAGATACTGCAT----TCTCTTTCATTTTCTGGAAGCCTCTACT--TCCTTCTTGAAGAGGTGGGTGTTCGGCATATTGCTGCCTAAAAGCGTGCTTTGTTTTTCTTCTTTCAGGTCCTGTGGCACTGATCTCTGCTGCTG---CCAGCTTCCACAGTGATATAAAGCCCCAATATGCACAGTGTTCTTACATCACAGCTACTCTGGATACTGTACTGGAGCATGGAACCAGATCATAGGGGTTCAGGTAAGTCCCCCTT-------TTTTAACA--TATTGTGTGC-CAGGAATACAG .:....:xx...:.:x..xx::...:...:...x.xx.....:.........:...:xx:.::::.::..:.:.:----...:........:.---------.:......----------..x..------------------...xx.:.:.:..xx...xx.:xx.:..:.....::.xx.x..x:..----......:..:.xx.::........::.....--...x..x-:.x:.x...x...:...:..:.-:.x.....xx.........x..:....x....:x:.:.:.....:.:::....--.xx.xx..:.:.:...----.x..x.x.x.:..:x..:...xx.---------.:.:x...::..xxx...x.:x..-..x...x:..:.:x:x.x..x.x.xx..---..x..x:.x.x.:..:......x.-------------.x.x.:::.....:..-----------------.:...:....:x:x.x...---------------------------::...x..x...::::.:::x..------.:.x...x---............x:.:x:.x:--..x.x..x...::x......:x..x----..:.::.:..:.::.-------.....xxxx:...:-..xx:x.x.x.x.:x.::.x..x........:....x..:.....:x.x:...----------------..x..:.x....:.::..........................................:.........................:.:...:...................:-..:........................x...-...............::x.x..x:.--------.x.::....x..x:..x::.x...:.:.xxx::..:.:.............x..:..x....:..::...--..x.:x.:...x.x..-----------------.......:::::xx.x:.:x.::...:::..:...:...x:.----:::.:...:xx..::.xxx..xx::..x.--....-x...:..xx..x..x.xx..-----...::.:..x..x--x...x.:..x:..:-----...:..x..:.:x..:..xx.:.:----.::..:.::.x...::x::...:::.x.--:.xx...----..::..xx::..::.x...:.::x:.:.:...x:x.:..:.-..:.....x..:...:.:..:x.:.:::x:.:....:.:...---..xx...x::.xxx...::.:xx...:.::......x:x.:.:.x:.:...xx.....-------------....:.x.....:....x:..x.::..x:......:..::...:.-------...:....--.:........-x.......::. 75M4I14M9I8M10I5M18I47M4D31M2I7M1D22M1D53M2D16M4I24M9I24M1D28M3D24M13I16M17I19M27I23M6I8M3I21M2I25M4D15M7I14M1I53M16I111M1I31M1I25M8I70M2D16M17D42M4D29M2I4M1I20M5D13M2I14M5D24M4D28M2D7M4I41M1I42M3D58M13I45M7D8M2D10M1D11M 789/1221 64.6% 1402/94230402 0.0% 249/1221 20.4% 130797827 59416728 +3074 chr4 + 190214555 183989155 183989154 183989215 61 TGACATTTTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTTTGGTTTGGTTTGGTT chr4 - 94230402 64624515 64624514 64624575 29605828 29605827 29605888 61 TGATGTGTGGTTTGGTGGTGGTTTTTTTTTTTTTTTTTTGTTAGTTTGTTTTGCTTTGGCT ...::.x.xx.:....xx.xx.....................x.....x....x.....:. 61M 47/61 77.0% 61/94230402 0.0% 0/61 0.0% 119364640 70849915 +13170 chr4 + 190214555 183993709 183993708 183994158 450 ATCAGTGGCATTTGAAACAAACCTACAGTAAACTAGTAAAAG-TGCCTTTTCATTGCCAGTTTTCTTCTGAATGTCAAATACAAACATTCGAAAGTCAAGAATAGTCATCTGGTTTCAAAGGAAAGCTGCTTAAAAC--GCAGGAGCATGTGAGGTAATGGGAGCCGTCTGCTCTGCCCCCACCAGATGG---------GTGCTGTGGTCTTC-----AAGAGAGCGCATAGGAAAGAAGTATGTGGGTTTTTTT------AGAACAGCTTTTTAAAAAATACTGTAGTAGGCCTTCTGTTAAAAGAGCCAAACAGCATTAATACATAAAATTGGGGTTAATAAATTGAATTAAATTGTAAAACACAAG--ATTTGTCTGAGGCGCTGCATCCGAGAAG-TTGTTCACTTGACTGTAACCCCAGAAAGCGGGTGATTTCCCCAAGCCCAAGGGCATTTAAGATAAAACTTGGCGAA chr4 - 94230402 53193833 53193832 53194288 41036115 41036114 41036570 456 ATAGATAGTATTTAAACAAAGCTTGCAGTCAGCGGGTGAAATCTGCTTTCTGAGCTTCAGTTTTCATTTAATTGG-GAACATAAACATATGAAAGTCAAGGATAGTAATTTGGTTTCAAAAGAAAGCTGCTTGAGACAAGCATCAGCC--AGAGCTAACAGGAGCCATATGCT-----------GGATGGTTTGTGTAAGCAATGTGGTCTTCCAAAAGAAAAAAAAAGTAGGAAAAACAGATATGATTTTTTTTTTTTCAAACAGAACTTCCCTAAAAAAGTTGTAGTCAACCTTCTGATCAGAAGGCTAGACAGTATTTGTACACATAATTGATATTAATACATTAAATTA------TAAACGCAAGGAAATGTTGTGTTGTTGCGCATTGGAAAAGTTTGTTCACTTAACTATAACCATGGAGTGCTTGTAATTTCCCAGAGCTGTGGGATATTTAAGATGAAACTTGGCAAA ..x::.:.:....:..xx..:.:.:....x.:.x:..:...x-...:..:.x.x:x:........x.:.:.x..x-:..:.:......x:..........:.....x..:..........:...........:.:..--...xx...x--x...x...::......:.x....-----------:.....---------.::x..........-----:.:.:.:x:x:.......:.x:x..:..:x.......------.:x.x.:...:::x.....x::......x::.......x.x.:.::..:.:....:...x:....:.x.....:x:......x...:.....------x....:....--.x.xx.x..xx.:xx:....:x..:...-..........:...:.....x::..:x..xx..:.......x:...:xx:..::.........:.........:.. 42M1I32M1D61M2I9M2D23M11D6M9I14M5I37M6I92M6D10M2I28M1I76M 296/430 68.8% 456/94230402 0.0% 46/430 10.7% 130799876 59414679 +13149 chr4 + 190214555 184001311 184001310 184001501 191 TTGTCTTTCTGCAGGTGATGTATCACCCATCAGTATGTCTCCCATCAGTCAGTCTCAGTTTATTCCACTCGGGGAGATCCTCTGCTTGGCCATCTCAGCAATGAACTCGGCAAGAAAGCCTGTCACCCAAGAAGCACTGATGGAGCACCTGACCACGTGCTTCCCAGGTAACGAGGCGGGAACGTAGCACT chr4 - 94230402 53196786 53196785 53196976 41033427 41033426 41033617 191 TTGTCTTTTTGCAGGTGATGTATCACCAATCAGCATGTCTCCCATCAGTCAGTCACAGTTTATTCCACTTGGGGAAATCCTTTGCCTGGCCATCTCAGCAATGAACTCTGCCCGAAAACAAGTCACACAAGAAGCACTAATGGAGCACCTAACAACCTGCTTCCCAGGTAGCTGTGCATGAATAAATCATT ........:..................x.....:....................x..............:.....:.....:...:......................x..xx....:.xx.....x...........:...........:..x..x.............:.x:x..:x...::x.x..:. 191M 161/191 84.3% 191/94230402 0.0% 0/191 0.0% 130804525 59410030 +136045 chr4 + 190214555 184009137 184009136 184011428 2292 TTTTTTTTTTTTTTTTTTCAGGTGTTCCAACGCCAAGCCAAGAAATTCTGCGGCACACGCTGAACACGCTGGTACGGGAGAGGAAGATCTACCCAACTCCAGATGGCTACTTCATCGTGACCCCACAGACTTATTTCATAACTCCTTCCCTCATAAGAACTAACAGTAAATGGTACCATTTGGACGAGAGGATACCTGACCGGTCTCAGTGCACCTCTCCGCAACCCGGGACCATCACGCCCTCTGCCTCAGGCTGTGTCAGGGAAAGGACATTGCCCCGAAACCACTGCGACTCTTGCCACTGCTGCAGAGAAGACGTGCACAGCACGCATGCACCCACCCTGCAAAGGAAGTCTGCCAAGGACTGCAAAGACCCTTACTGTCCCCCTTCTCTGTGCCAGGTGCCACCCACTGAAAAGAGCAAAAGTACTGTAAATTTTTCCTATAAGACAGAAACTCTCTCAAAACCTAAAGATAGTGAAAAGCAGTCAAAAAAATTCGGGCTAAAGTTATTCCGGTTAAGTTTTAAAAAAGACAAGACCAAACAGCTGGCCAATTTTTCTGCCCAGTTTCCTCCTGAAGAGTGGCCCCTGCGAGACGAGGACACGCCAGCTACGATCCCTCGGGAAGTAGAGATGGAAATCATTAGGCGCATTAACCCAGACCTGACCGTGGAAAATGTCATGCGGCACACCGCGCTCATGAAGAAACTGGAAGAAGAAAAGGCCCAGAGGAGTAAAGCCGGGTCCTCTGCCCATCACAGCGGAAGGAGTAAAAAGAGTAGGACTCATCGGAAGTCCCATGGAAAGTCTCGGTCTCACAGCAAGACACGGGTGTCTAAAGGAGACCCTTCCGACGGTTCACATCTGGATATCCCAGCTGAAAGAGAGTATGACTTTTGTGATCCTCTTACCAGGGTGCCCAGGGAGGGCTGCTTCATCATTGAACACAAAGGAGATAACTTCATCATGCACAGCAACACAAACGTGCTCGAGTCCCACTTCCCCATGACACCAGAATGGGATGTGTCTGGTGAATTGGCTAAAAGGAGAACTGAGATGCCTTTTCCTGAACCTTCTAGGGGAAGCTCCCACTCAAAAGTGCACCGAAGCCACAGCCATACACAGGACCGGAGGTCCAGGAATGAGAGATCCAACAAAGCCAAGGAGAGATCCAGGTCGATGGATAACTCCAAAGGCCCTCTGGGTGCTTCTTCTCTAGGGACGCCGGAAGACCTTGCTGAAGGCTGCAGCCAAGACGACCAGACCCCCAGCCAATCCTACATTGACGACAGTACTTTAAGGCCTGCACAGACCGTTAGTCTCCAAAGGGCTCACATTTCGTCCACAAGCTATAAAGAGGTGTGTATTCCAGAGATAGTCAGTGGCAGCAAGGAACCGTCCAGCGCTTGCAGCCTTTTGGAGCCAGGAAAACCACCCGAGAGTTTGCCATCCTATGGCGAACTCAACTCTTGTCCAACAAAAACAGCCACAGATGACTATTTCCAGTGCAACACCTCTAGTGAGACGGTGCTCACGGCACCATCACCTCTGGGAAAGAATAAGGAGGACCATGACACTCTGACTTTGGCAGAAGGGGTGAAAAAGCTCTCCCCTTCTGATAGGCAGGTCCCCCACTCCTCCAGGGAGCCTGTGGGGCACAAGGAGGAGTCACCAAAAGGGCCGGGTGGGGGCCCCGCTGCTTCGGGAGGAGTGGCTGAAGGGATCGCCAACGGACGCCTCGTCCAGCACCATGGTGCCGAGCCCAGCAGCTTGGACAAGAGGAAAGAGATATTTAGCAAAGACACACTGTTCAAACCTCTTCACAGCACCTTGTCTGTAAACAGCTATCACAAGTCGAGCCTGTCCCTCCTCAAATCTCACCCGAAGACACCTGCTGACACATTGCCAGGCCGATGTGAGAAACTGGAACCGTCCCTGGGGACCTCGGCGGCACAAGCCATGCCTGCTTCCCAGCGTCAGCAGGAGTCAGGAGGGAACCAGGAAGCCTCTTTTGACTATTACAACGTCTCTGATGATGACGACTCTGAGGAAGGGGCAAACAAGAACACAGAGGAGGAGAAAAATAGAGAGGACGTAGGCACCATGCAGTGGCTCCTCGAGCGGGAGAAGGAAAGAGACTTGCAGAGGAAATTTGAAAAGAACCTCACCCTTCTTGCTCCAAAAGAAACCGACAGCAGCAGCAACCAGAGAGCCACCCATTCAGCCCGGCTCGACAGCATGGACAGCAGCAGCATCACAGTGGACAGTGGATTCAACTCCCCACGGTAGG chr4 - 94230402 53204068 53204067 53206356 41024047 41024046 41026335 2289 TTTGTTTGCTGTCATTTCTAGGGGTTCCAACACCCAGTCCAGAAATCCTTCGACATACCTTGAATATGCTTGTACGGGAGAGGAAAATATACCCAACTCCAGATGGTTATTTCATTGTAACCCCGCAGACTTACTTTATAACACCATCTCTCATAAGAACTAACAGTAAATGGTACCATTTGGATGAGAGGATACCTGACAGGTCTCAATGTACCTCTCCGCAACAAGGAACTATCACTCCCTCCACCTCGGGATGCGTCAGGGATCGAACACTACCCAAAAACCACTGCGACTCCTGCCACTGTTGCAGAGAAGATATGCACAGCATGCATGCATCTACCCTACAGAGGAAGTCAGCAAAAGACTGTAAAGACTCATACTGTCCTCCTTCATTATGCCAGGTCCCACCCACTGAGAAAAGTAAAAGTACTGTCAATTTTTCTTATAAGGCAGAGACGCTCACAAAGCCTAAGGATGTAGAAAAGCAGTCTAAGAAATTTGGACTCAAATTATTCCGATTAAGTTTTAAGAAGGACAAGACAAAACAGTTGGCAAATTTCTCTGCCCAGTTTCCTCCCGAGGAGTGGCCACTGAGAGACGAGGACACCCCTACCACTATACCTAGAGAGGTAGAAATGGAGATTATCAGGCGCATTAACCCAGATTTGACTGTGGAAAATGTCATGAGGCACACTGCACTAATGAAGAAACTTGAAGAAGAAAAAGCTCAACGAAGCAAAGCGGGATCTTCAGCTCACCACAGTGGACGAAGTAAAAAAAGTAGGAATCACAGAAAGTCTCATGGGAAATCGAGGTCACACAGCAAGACTCGGGTATCCAAAGGAGATCCATCAGATGGCTCTCATTTGGATATACCTGCTGAAAGAGAGTATGAGTTCTATGATCCCTTGACTCGATCCCCACGGGAAGGCTGTTTCATAATAGAACACAAGGGAGATAATTTTATAATGCACAGCAACCCTAGCATGATTGAATCTCACTTTCCCATGACACCAGAATGGGATGTGTCTGGTGAGCTGGCCAAAAGAAGAACTGAAATGCCTTTTCCCGAACCTTCCAGGGGAAGCTCCCACTCTAAGGTCCATCGGAGCCACAGCCATACGCAGGATAGACGATCAAGGAATGAGCGGTCTAGTAAGGCTAAAGAAAGGTCTAGATCCATGGATAACTCCAAGGGACCTCTGGGCTCGGCTACTTTAGGCACACCTGAAGACATGGGTGAAGGCTGTAGCCCAGATGACCAAACAACTAGCCAAACTTACATTGATGACAGTACTTTAAGGCCATCTCAATCACTCAGTCATCAAAGGGCTCTGATTTCATCTGCAGGCTACAAAGAGACCTGCATCCCTGAAATAGCTAGTGGCAGCGTAGAAACCCCCAGCTCCTGTAGTCTGTTGGAAC---AAAAGCCTACGGAGAATTTGCCATCGTATAGTGAGCTCAACTCCTGCACAACAAAATCTGCAGTCGATGACTATTTCCAGTGCAACACGTCCAGTGAGACTGTACTTACTGCTCCGTCACCACTGGGAAAGAACAAAGAGGATCATGACACGCTGACAGGGACAGATGGGCTCAAAAAAATGACTCCCTCAGAAAGACAGTCTCAGCATGTTGCCAGGGATCCTGGGGTGCACAAAGAGGAGTCCCCAAAGGGCCCAAGCGGCAATTCGGCAGTTGTTGGCCAGACTCCAGAGGTGATTGCAAATGGACGGCTGGTTCAACACCACAGTGCTGAATCGAGCAGCCTTGATAAAAGGAAAGAAATATTTAGCAAGGATACGCTCTTCAAACCTCTGCACAACACTCTTTCTGTGAATAGTTTCCATAAGTCTAGCACACCCCTGCTAAAGCCCCATCAGAAGACCCCTTCTGACACGTTGCCAGTCAGATGTGAGAAACTTGAACAAGCGATAGTAACCTCAGTCACACAAGTCATGCCTGTCTCACAGAGACAGCAAGAGACTGCTGGGAACCAGGAGGCCTCGTTCGACTACTACAACGTATCAGATGACGATGACTCGGAGGAGGGAACCAACAAAAATGCCGAGGAAGAGAAGAACAGGGATGATGTTGGCACAATGCAGTGGCTCCTGGAGAGGGAAAAAGAGAGAGATCTGCAAAGAAAGTTTGAAAAGAATCTCACTCTTCTCACCCCAAAAGAAACTGAAAATAGCAACAACCAGAGAGCCACCCACTCGGCCCGCCTGGACAGCATGGACAGCAGCAGCATTACTGTGGACAGCGGGTTCAACTCTCCACGGTAGG ...x...x:.x.:x...::...x........:..x..:.x......:..x..:..:..x:....:.:...x..............:..x.................:..:.....:..:.....:........:..:.....x..x..:...................................:...............x.......:..:.............xx..:..:.....x.....::....:..x..:........xx.:...:.:...x:...............:........:...........::.........:.......:.:.....:..:........x..x..:.....:......:.x........:.....x:.:........x...........:..:..:...........x........:......:....:..x...x....:.....:...:xx...........x..:.....:..:..x..:........:...........:..:........x......:....x.....:.................:..:........x...x.............x..x:.:..x..x...x.:..:.....:.....:..:..:.................::....:...............x.......:..:..x...........x...........:..:..:x.:..:.....x..:..:..x..:..:.....:...x.:........:.......x...:x.:.....:.....:..:..xx....x...........x.....:..:........:..x..x..:..:..x...:.......x..x.................x..:.:......::.x..:x.:x:x..xx....:.....:.....x..x........:........:..:..x............x.x.:.:..x.:..:..:.....:................................::....:.....:........:...........:........:.................x..:..x..:..:..............:.....:x.:x.:..x.........x.:..:.::..:..:..:..:..:..:..:..x..............:..x........:x.xx..x..:....x..:..x......x.x.x.........:....x...:.....:..xx.:......x.:........:.................xx.x..:x.xx.:....x:..........xx.....:..::..:....:......::x..:..:..x..:....::.........:x:...x.x:.....x.:..:..:..x.....:.---:...:..xx.x....:.........x...:.:..:........:..:x........x.x..x::x.......................x..:........x..:..:..x..x..:.....x...........:..:.....:........x.....xxx.:....x...x.x.....:x.xx.:..:..x..x..:...x::.xx..:x::x.......x....x..x......:........x.....:..x..::.:..x::::.x..x.:.x:x..xx::::xx.x..:.x...:..x..:.....x..x..:..:.....::....:..::.x......:.x..:..:........:...........:..:..:..x...........x....:...::.x.....:..:..:.x:..:.....x...x:::....x..x..::.:..:.x......x...x.......:.......x.x.............x....x:x.xx.:.x:.....:.:x:......:........::..x...x.x.....:...x.x.xx...........:.....x..:.....:........x..x.....:..:.....x.....:..::.x.....:..::.x.....:.....:..:..:..x..:..x.....x..............x...x....:..:..:.....::....:..:..:...........:.....:.....::.:...........:..x.::....:..................:..:.....x..x.......................:..x........:..:........:.......... 1425M3D864M 1781/2289 77.8% 2289/94230402 0.0% 3/2289 0.1% 130805069 59409486 +3245 chr4 + 190214555 184014570 184014569 184014658 89 TTAAAAAAAAAAAACAAAAAACAAAAAACCAACTTTTAAATTTGAGGAATATTTTTACTGCTAACATTCT-ATCTCCTTTAACTTTTTCA chr4 - 94230402 54355600 54355599 54355679 39874724 39874723 39874803 80 TTAAAAAAAAAAAACAAAAAACTGAAAGTCAATTTTTAACTTTTAG-----TTTTT-----TAAAATTTTGATACCTTTTGATGTTTTTA ......................x:...::...:......x...x..-----.....-----...x...:.-..x:.:...:.:x....:. 46M5D5M5D9M1I19M 63/79 79.7% 80/94230402 0.0% 11/79 13.9% 129658970 60555585 +24760 chr4 + 190214555 184018130 184018129 184020566 2437 TCAAATATTGAAGGAAGAGAATTTCCTCCTTGTGATACTTAGGATGACCCTATCTTACTCTAATAG--------ATACAATAATTAGTTTGTTTAAAAGCAAAATGTTCTTTGTGATACAAATGAAGAGTAGGGCCTGAGGATGTTATT-CTTTCTAATGGAAGGACATAAATCTATTTTATGTAGTTT--TAAATAGAATGCCTAAATTAGGCTGTGGGAGATAAT-----TTTTAGTGGTTGTAGGAAAGAGCAAATTTAGGGAGTGTTGAACTTCAGGCCTTTT-ATTCCTGGGAAGATATGTATAGAGAAAACTTTTAAAATAATTTTTGATT---AGAAATATACATGTGCCCATGTAATAAACAACAGAA---TGTGCTCATTCTGCTAGTGCGGTATAATCCGAATTTGTACTCCCCTAAAATTTATCAGAATAACAATTATGCATACATGAACTATGCCAGAGTAATGTTTACAGATACTTTGTAACCAATTTCAGGAGGCGTTTTTAGCTGGATG-----------------------TGTA----GTTAATTAGACCAACTTATTTCCAAATGGTTTGTTAACATTTTGCTTTGGTTTACAATGTCATGTTGAACACAAA--------GAAGACCCAGCAGCAAAGGGATGA------CCAATAATTTCATCTT----ATAGCAAGGAGACATTCCAAC------GTTCCCATGTTTTAT--TTTCTGAGAACAGTGGGACAGATCTGTAGTAATGGAATATTATTTGCAAAAGG-----GTTACATATGACACAAGTAAGTGTTCTG-ACATAAAGTTTTATTTAGTTCAGTGGCATGTGCTGTTGGGAGCCATACACCATAAAATATATATATCCCAAAATAAATCTAGAAT--ATTTTCACCTCCAATTTCAGTAATTGGCATATGATTTGTGAGACGCATCTGTTTTTGTATGAGGTTTAATCACTAGCAATCTGTTTAAAGAATCCAGTCCTATACACAGTTGGACTCATTCTTGAAACCTTTAAATGCTCCCTCATAGTTTTTCAGTTATTTGGAAGTTGCATTGGGTCAAACTGAACTCCTTGAGTTTGGTGTA--AATTCCTTTTTTCTGCTTATTATAGTGAAACTTCAGCATGTTTCTTAGTAAACTCCCATACCATTGAAATGCTT--------------AAGCCAGTTGGCTTTCAGTCTCATGCCTTATT---TCCTCCAAGGCATGCCTCAA-----------CGCATTGTTTGTCTCAT-TGCTTA---AATATGT----CCAGAAGGAATGAT--CATGTATCTAATAGACTACATAGTTGGTTCCCTTGGGGAGTT---ATATATCATACAGTTACTAAATATTTGTCTAAATTCATTTTTTCCAAAAACCTGCTCTCAAATTTTTCTTCTACTCTCAGTTCATAAATAATATAACCA----TTGAAACAACACATCAGC--CTCTAGCTGATCCTCTGAAAGTAGCCATTGAAATAATCGAATACTGTGTGAACAGGAAAGGAAAGCGTTACCTTTAAGAGAAGCTTT------AAA---ATAGGAATTTATTGATATTTCACAAGATATAGGTT-TACAGAAGACATTATTCAAATAAATATGTACACTATTTGCCTG-ATGCTATGGGGTACATAATTTTTTAAAAACTCCCTTAGACCAGCAGCCA--------------TTAGTGTAGAAATGA---TGGAC---TTTAAAGGTGATACC-----------ATGTAAGCAGATGTTGCATATAAAAATATTCCTGCCTGAA--------------------------------TCTGATCGAGATTCTTGAATGGGGGAGGAGTGGCAGCCGGCAGCACATTGCAAATGTCATTCGAGG-----TCACGGTGAGGCTCTCGGTCCCGGAACAGTGGGGGCCTCGCCAG-GCGTTGCCAGTATCCCTT-TCCTCCTGTAAAATCATAGCTTTGTGTTACACGACTGCTTATC---CAGTCTTAGGGTTTAGCAGCTGAAAGGTTTACAAAACTGAATCTGGTTGAATCTCTGTG------------AAAGGGTCAACACA--TCTGTCGGCATTTTGCACACTT---ATGTATTATTATGATACAACATATTACTTT-ATGGTAATTTTTATTTTTACATATAACTACCTCCATAAATTTGATGAAATGGCAGCCGTGTGTTAAAGTGTATCGTTCAGAAGAGCAAAGTTGAACACTTCCTTCAACATTAGGGCATGGCGTGCT-GTGTGTGTCAGTGATTGCCTCTGTGGAC-TCATGACTTTCCATCGCCATGGCTTTCTCTTACGCCGCT----GTTTGGCTTTCAGATGTAATCCTGT----CTTCTCCTCTCTTCCCCACGAAAGCGCACTCGATTTTGTTAGGAATG-AACGGAAGTTTAAAAATTCTTGTGCCCACCCCCGCCCTCCACCCATTCCTGTTAAAAGTTCT--CTGGCGAAGAGCCAATGGGTGAACGTAATTGAA------AGAGCTATTTACTCTTTTGGAAATCTGATTTGAAGTCTAAGTTTTCAGTAACAGAAGACACACAAGCAATGTGGACTGCCAAGCTTGAAGCACTTCGGGC-----TCTGCCTTCACTCGCATGCTACCATGTCGAGCC chr4 - 94230402 53211290 53211289 53213724 41016679 41016678 41019113 2435 TCAAGTGTTTTAAAAAGATAATCTGATTCTCGTGTCACTGCTGGT-ATTGCAACTTGCCATGAACGCAAAAACCAGAAAAAAATCTGATTTCTTTGAACAAAAATATTCTTTATGATATAAATGACAAGTATGGCCTGAAGAACTGATTTCTTTCTAGTGGAAGGACATAAATCTATTTTATGTAGCTTATTAAATAGAGTGCCTAAATTAGGCTATTAAAAATAGCATACAGTGTAGTGATTATCAGAGA-ACAAAATTTAGAGAATTATAAACTTCTGGCCTTTTTATTCAATGGATGTTATTTGCAATTTAGCATTTTATGGACATGTTTAGTTTCTAGAAAT-TAAATGTGTCTGTATGGTGGGCAGTAGAAAACTGAG----TTCTGTAGGTATGGTTTATCCTGA--TTGCTCTCCCCGAAACTGTTACTCCAGAGTAATTCTTACCATGCTAATTACTGCAGAGTAACTTCTAAAGATAGTTG------AACTTCAAGAATAATTTAGAGGTGTAGGGTCACATTCTGCTCTGTTCCTCATGCAACCTGGTAGTGCAACAAACTGACTTCAAAATTA---------ATTCTACCTTCGTTTTC--TGTCA----GAACACAGAAATTGGTGGAAGA----ATAACAAAGATATTAAAACGTTCAGCAGTCCAAACTGTTGAATAGAAAAGGGACATTTCCACTGTCTAGCTCCTGTAGTACACAGGTATTAAAACCAACTGTACAGACGGG-------GAACCAGTATTTTCATCAGGTTCTGGTGACATGTATTAC----------TCTGTACGCAAAGTCATTTGAGCTTCACT--CATGTTCT--------------------------ATAT-TCTCATCAGAAGTGTTCACTGAAGGTTCAGCCTTATGTTATGCAGTTGG-ATATAAGTT--------CATTTGCTT-----------------ACTAGCCGACTTTCTAA-----------CCAGACACGAT------CAGTTTCTAATTCTGTCAAG----------AACATCTCTAGTACCCAGTAAATGCACAGGT-----CTGCTTTCCTTGGTTTCAATGTACAAATTC------------TATTTCATAGGAGCAATAAGACGTTT--TGGTGCACATGAAGGAAATTATTGTGCTTTTGGTTGGTTATCAAAGTCACTTGGCCTTTAGCCTTCTGCCTTATCATACCTTCCAAGATGTGCTCTAATGACCATATAGCGCTTTGCATGACGCATCTGATTATTCAATATGTAACTCCAGCCGCGCTTACTCCATGCAAACTGTAGA-----------GTTTTTGTGGGGAGTTGTCATATACTATGCAGTGGCTGACTGC-------GATT--TTGTTTTCTGAGACAAGCTCTGACATCGGTAGTATGTATCCATTCAGTAAATAAAAATGTCAAAACttaaaaaaaaattataataattaCAACCAATGATCTGAA-GTACCAATGGCAGTATTAGAAT-----GTGAAGAGCAAAAACAAATTTTATCTTTTGGAGAAGTGTTTTTCATAAACTGATCAGAACTTAT---------GCAGGCAGCTGGTTGTACAGAAGAGATAATTCCAACAAAACATGACAGTACATACCTACAAACTGTGTAGTATGTAGTTTCCTAACG-TTCCCGGAGACCAGCAGACAACATAAATGTCATATTAATGTTGACGTGGCATTGTACCAATATTAATGTGACTCTTGGAATATGGAATGTAAACAGAAGTTTCAAATAGAAACGTTCTAATCTTGAATTCCTTtttttttctttctttctttcttttttcttttt----ttctttAA-------------------------AAATTAACAATGGAATATAAGGAAATTCCATCTTGAGGTTCT-GGTAACAAAACCACGAGAGTGGAGCTTGAGTGCTTTATGTCACCCTAATCCTTTGATGAAATCATAGCCTTGTATTACATGGTTGCTTATCTATCATTCTTCTAATGTATCGATTTAAAGGTTTACAGAGTTAGATTAGGTTGAATCTGTGTTGTGTTCAACTGTAAAGGGTCAACACAAATCTGTCGGCATTTTGCACACTTGATATGTATTATTATAATACAACATGTTACTTTTATGGTAATTTTT-TTTACACATATAACTACCTCCATGAATTTGATGAAAT-GCAGCAACATA--AAAGCGTATTGTAC---AAAGCAAGGTTAAAAACTT--TGAAGCATTAGCTCATGGCGTTCTCTTGTGTGTCAATGCTTGCGTATGAAGTCATCGTG--TTTCCATTGCCACAATTTCCTTTTACAATATTAAAAATCTGTCCTTCAGATG-AGTCATGTAAGACTTTGAC--------------AAGGCTGCATAATTGGGATAACAGTGAAAAGGGAGGCTGAA----------CCCTCCCCTCCTCTCC-CCAGTTACTGCTACAATTTCTGCCTGGTAGAACTTGAAAATGTGTATGTAACTGAGCAAATTAGGAACATCTACAGTCTGTGAAATATGATTGATGGTGTGGGGTTT---TAAGGGAAGACGCTCCGGGTATTTTCTC-GCCAGCCTGCAAATACGCTGGGCCCTATTCTGCCTCTGTTTT--TGCCAGCAGGTCAGGTC ....:.:..xx.::....x...:.xx.:..:...x:...xxx.:.-.::x:.x...:.:x.:.xx.--------.x.x..x...:x.x..x:..x:..xx.....:......:.....:......x:....x.......:..xx.x...-.......:............................:..--........:...............:.x::.:...::-----x.x.....:..:.x:..:.-.xx........:..:.xx.:......x........-....xxx...x.x...x.::.:xxx.:xx.....x::xx..x...::..---......-..x.....:.::.:.::.:::..::....---..x.----.....:x:..::...x..x:.:..--...:x......x...x.x.xx.xxx.x.::....x.xxx:.:::x..:..:xx........:x.:..x.....x..x------..:....:..:xx:...xx..x..x.x.-----------------------..:.----.x..:.xx:..x....x.:...x....x:---------...:.:.:..x....x.--.....----.......:.--------.....----::.:.....:x..x.------:..::.:.::x.x..x----....x..:.:......:.x..------.:...::.:x.x:.:--x.x:.:.:.x..::x.x.....:xx.-------.:.x:.x.....x..xx...-----..x....:.:x:..----------....-..::.....:x.x.xx:x....x.--.....x..--------------------------....-..:..xx.x..:.x.xx.x.--.xx....x.:::.xx..xx.:.:....-....:.x..--------...:..:..-----------------......x:x..x.:...-----------.:.x....::.------..x.:.:x..x:..x.x..x----------.::x.:..x:x..::::.x.:x....:x..x-----...xx:......:x..:::....--.....------------....x:.xx.:.:.xx:.:x.:....--.:..:x..x:xx.x:xx...:xx:.....--------------...:..x.....:..:..:..:x........:---:.:......:::...:::..-----------...x...:x..x.x...-..x...---.......----....xx.x:x.x.:--....:.xx:x:....-----------...:::x.........---.....::..:....x:..:.x.::-------:...--..x...:.x:.:..xx.....x.x..:xx.xx.x.::x::..x.:x:.......x.xx::..----..:...x..x.:xx:.::--:.x:.:.::..xx......-...x.x..x.x.:..x.x....-----.....x..x...::x..::x...:....x:......:x..------...---..x:...:....---------:..:.xx::x....-.........x..x....x..:...xxxxx...x..:x.:...:-.x:..:..x:...::..:...::...x:-:....xx..........x..--------------...:...x..x:..:---..x..---.x.x..x....:x.:-----------......:....x...x..x...:...::...:x::..x:.--------------------------------...xx.:----.....x..-------------------------.x...:xx....xx..x::...-----:..:xx.....:...-...xx.::...x::.:.:.:xxx..:x.-.:.:.x:xx..xx....x-....::x:.:..........:....:.....:.::........---..x....xx::.x..x.:::.x...........:.::.::..:x..........x...x------------..............--......................---............:.........:.......-............-...x:..................:.............-.....x:::.:--....:....:..x.---.:.....:...:..x....--.xx.:......xx........x..-x.........:..x....x.x..x:.x.-..:..--.......:....::::..:..:....:x:::.----:.:..x.:........-.:..x...----...:xx.--------------...xx::.x::...xx.x..:x.:..-..x..:..x:.:..----------...x....:x.:....-..x:..x...:..x..x....--....:::.:xx:x..x:x...x.:....:...:------..::x:..:...xx.:.xx.....x.....x:x:..x.::.x...---...x:......:.x.x:.xx..x.xxx.-....:x..xx..::..x::....-----.......::::.:x--...:.x..x...::.:. 45M1D20M8I75M1I39M2I36M5I19M1D35M1I49M3I6M1D29M3I4M4D24M2D77M6D28M23I4M4I29M9D17M2D5M4D9M8I5M4D15M6I16M4I21M6I15M2I26M7D20M5I14M10D4M1I24M2D8M26D4M1D20M2I27M1D9M8D9M17D17M11D11M6D20M10D31M5D23M2I5M12D26M2D29M14I32M3I20M11I17M1I6M3I7M4I14M2I15M11D16M3I24M7D4M2D62M4I18M2I19M1D22M5D40M6I3M3I12M9D14M1I43M1I28M1D20M14I15M3I5M3I15M11I40M32I7M4D8M25D22M5I15M1D28M1I18M1I43M3I59M12I14M2I22M3I30M1I12M1D37M1D11M2D14M3D19M2D24M1I28M1I5M2D32M4I16M1D8M4I7M14D26M1I14M10D16M1D21M2I33M6I45M3D28M1D23M5I14M2D17M 1435/2176 65.9% 2435/94230402 0.0% 520/2176 23.9% 130806840 59407715 +44689 chr4 + 190214555 184022996 184022995 184023569 574 GTTTAAAGGGATCATAATTCTGCAGGTATCTTTCTCTGAGTGACTGAATGTGACTATTGCATTAGGG-TAAATGAATTAAGACGTGCAAGTGGGATTTACTGTATGTTAGAAAGGAGTTTTGCAGCCAAGACTGCCTTGAATAAAATGTGTTTGCACTGAAAAAAAA-------TTTTAAATTACTTGGTCTCTGGTTGCTGTAAAGGTCATCCAAGATGGATGTTCTGTTTATATTGTATAGTATTTCATATGAAATAATTACAGTTCATGAAATGTCTTCCCTAATGTTACTGATTTATAACAGCACATTTGTAACATGGTTTTTATCGTGTCAGTGTACCATACTGTAAATGATGATTACTTGTCATGCTTAGTATAATAACTTAAAAGAAAAAAAAGGACAGGGATTTTTGTAAGTCTATATTTGAAAGTCCCTCCCTATGGTGATACTGTGTTCATGTTGTTTATGTAGTGTTGTGTGAAATATCCATTTTGGATTGTGTTACTTTTTAAGATATTAAATAACATTTGGTTATATGTCTTAAGTGGATTTTTTTTGGTAC------------TTGAGAGAAAATATTTT chr4 - 94230402 53215300 53215299 53215888 41014515 41014514 41015103 589 GCTGAAAGGGATGGTAATTCTGCAGGTAACTTCCTGTGAGTGACTGAATGTGGCTGTTGCATTAGGTCTAAATGAGTTAATAAATGCAAGTGGGACTTACTGTATGTTAGAAGGGAGTTTTGCAGCCAAGACTGCCTTGTATAAA-TGTGTTTGCACTGaaaaaaaaaaaaaaattaaaaattaCTTGGTCTCTGGTTGCTGTAAAGGTCATCCAAGATGGATGTTCTGTTTATATTGTATAGTATTTCATATGAAATAATTACGGTTCATGAAATGTCTTCCCTAACGTTACTGATTTATAACAGCACATTTGTAACATGGTTTTTATTGTGTCAGTGTACCATATTGTAAATGATGATAACTTGTCATGCTTAGTATAATAATTTAAAGG--AAAAAAGGACAGGGATTTTTGTAAGTCTATATTTGAAAGTCCCTCCATATGGTAATATTGTGTTCATGTTGTTTATGTAGTGTTGTGTGAAATATCCATTTTGGATTGTGTTACTTTTTAAGATATTAAATAACATTTGGTTATATGTTTTAAGTGGATTTTTTT--GTACCCATCGGCGGCTTTTAGGGAAAACGCTTT .:.x........x:..............x...:..x................:..:..........x-.......:....x.x:...........:................:..........................x.....-.....................-------..xx......................................................................................:......................:.........................................:................:.............x.......................:.....:.--..............................................x......:...:..........................................................................................:................--....------------..x..:.....:::... 67M1I77M1D21M7I218M2D165M2D4M12I17M 534/569 93.8% 589/94230402 0.0% 25/569 4.4% 130807696 59406859 +3275 chr4 + 190214555 184049406 184049405 184049488 83 CTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTGCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAAACGCCCGCCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:..:..:xx.x..:.::........:.x...xxxx.x........:..:.........:.....--...:x.:....:::. 66M2D15M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 165852280 24362275 +3003 chr4 + 190214555 184075367 184075366 184075438 72 TGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAAGAAATGGAAAGAT chr4 - 94230402 72165096 72165095 72165167 22065236 22065235 22065307 72 TGACCAAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATAAGGAGAAAGAATTATAAATAT ..x.:x...x.....x..:.:.......:.......xxx.x..::....x.:.:........x.:x...x.. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 111910271 78304284 +3170 chr4 + 190214555 184075380 184075379 184075450 71 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAAGAAATGGAAAGATTAAGGAAATTGA chr4 - 94230402 13722720 13722719 13722790 80507613 80507612 80507683 71 AAAAAAAAGACAAAAAAAAAAAAAAGGAATAGCAAAGAGGAAGTAGAAATTAAATAACTCAGAGCAAGTGA ........:.x..............::..x.:x..........x.::..x.::.x.:x.:.::.x..x... 71M 50/71 70.4% 71/94230402 0.0% 0/71 0.0% 170352660 19861895 +3064 chr4 + 190214555 184075381 184075380 184075447 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAAGAAATGGAAAGATTAAGGAAAT chr4 - 94230402 42895012 42895011 42895078 51335325 51335324 51335391 67 AAAGAGGAAAGAAGGAAAAAAAAAGAAAAAATAAAGAGAGAATGAGAACTGTGAGAAACCAGGAAAT ...:.::...:..::.........:......x......::.:x:....x..x:.::.x:x....... 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 141180369 49034186 +3095 chr4 + 190214555 184075381 184075380 184075431 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAGAAAGAAATG chr4 - 94230402 44177696 44177695 44177746 50052657 50052656 50052707 51 AAAAAAAAAAAAAAAGAAAAGAGACAAAAATGCAAGAGGAGGAGAGGGATG ...............:....:.:.x.....x:x.......:..:..::... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 139897685 50316870 +8697 chr4 + 190214555 184091187 184091186 184091398 212 AGGAAGAGAAGAATCAGTGCCAGGGCACAGTGGCTGGGCCAGACAGGCGGGGCAGTGCTGGCGCGGCCCTTCAGCATGCACATCACCCTGGACCAGGATCCGTTGTTGGGCAGCGGGGTGATGCCCACCACATTGCACATGACATTGTAGACGTCCACCGACCTGATAGGAGCAGCTCTGAAGTTGGATTTGAAATCTGAAAGGGAAAGGCA chr4 - 94230402 53223990 53223989 53224199 41006204 41006203 41006413 210 AGCAAGAGCAGAGTCAGTGCCAGCACACAGCCGCTCCGTGTGCAGAGTGGCACGCGGACAGCCGTGTTCTTCAGCATGCACTCCACCCTGGACCAGGAGCCATTGTTTGGCTGTGGCTGCACTCCTGCCAGGCTGCACATGACGTTGTAAACATCCACGGATCTGATGGGAGGCGCACGGTAGTTGGATCTGAAATCTGCA--GGAAGAGCA ..x.....x...:..........x:.....:x...xx.:xx.xx::.:..x:.:xx.x::..xxx.::.............x:...............x..:.....x...x.:..xxxx.:x..::...x::..........:.....:..:.....x..:.....:....xx..x.x.x........:.........x.--....::... 201M2D9M 147/210 70.0% 210/94230402 0.0% 2/210 1.0% 130867197 59347358 +6745 chr4 + 190214555 184097242 184097241 184097388 147 TACCAGGTCCGAAGGCCAGGAAGATGCCCCGCATGTCCATGAGCTCGTTGTCGTAGCCGTGCCATCCACGCTGCCAACCTTCCCGCCTGCCGGTGCTGTTCATCCAAAACGGAAGCATCTCTCGATTCTGAAACCAAGCAAGGCAGA chr4 - 94230402 53224486 53224485 53224630 41005773 41005772 41005917 145 TACCTGGCCCATATGCGAGGAAGATGCCCCTCATCTCCATCAGCTCGTTGTCGTAGCCATGCCAGCCGTTCTGCCAGGCCTCCCTCTTCCCTGTGCCGTTCTCCCAGAAGGGCAGCTTGTCCCTGCTCTGGGAAACAGCA--GCAGA ....x..:..:x.x..x.............x...x.....x.................:.....x..::x......:x.:....x.:.x..x....:....x:...:..x..x...x.x..:.x::....::.xxx....--..... 140M2D5M 107/145 73.8% 145/94230402 0.0% 2/145 1.4% 130872756 59341799 +3120 chr4 + 190214555 184109184 184109183 184109246 63 CTGGGTGACAGAGGGAGA-CTCCATCTCAAAAACAAAACAACAACAACAACAAAAAAAAACAAA chr4 - 94230402 66137396 66137395 66137459 28092944 28092943 28093007 64 CTAGTTGATATTGACAGATCTCAGTTTCAGCAGCAAAAAAACAACAACAACAAAAAAAAACAAA ..:.x...:.xx.:x...-...x:.:...:x.:.....x......................... 18M1I45M 49/63 77.8% 64/94230402 0.0% 1/63 1.6% 117971788 72242767 +3020 chr4 + 190214555 184109210 184109209 184109254 45 CAAAAACAAAACAACAACAACAACAAAAAAAAACAAAACAAACAA chr4 - 94230402 35855483 35855482 35855527 58374876 58374875 58374920 45 CAAAAACAAAGCAACAACAACAACAAAACCCAAATAAACAAACAA ..........:.................xxx..xx.......... 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 148253727 41960828 +3048 chr4 + 190214555 184109217 184109216 184109273 57 AAAACAACAACAACAACAAAAAAAAACAAAACAAACAAACAAAAAGAACTAACAATA chr4 - 94230402 53041004 53041003 53041060 41189343 41189342 41189399 57 AAAATAACAACAACAACAAAAAAAATCCACCCAAACCAACCAACAAAACAAACCACA ....:....................x.x.xx.....x...x..x.:...x...x.:. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 131068213 59146342 +8602 chr4 + 190214555 184112668 184112667 184112825 158 TTACCTCAGTTATGAACCAGCCTTCATCAGCCACTAAAGTCAAAGGAGAGACAAACTTTCCTTTCTTGTAATAGAACCTGCTTGGGATGGCTTCTTTCTCGTAGACAGTCATGTGTTCCACTGTGCTCAGTTTGTTATATATCTGCAAAGAAAATCAA chr4 - 94230402 53225520 53225519 53225677 41004726 41004725 41004883 158 TTACCTCTACTATGAACCATCCCTCCTCAGCCACAAGAGTTAGAGGAGACACAAATTTTCCTTTTTTATAGAAAAACCTCTCTGGAATATCTTGTATGTTGTAAACATTCATGTGTTCCACAGCTTTCAATTTTTGATATATCTGCAAAGAAAACAAA .......x::.........x..:..x........x.:...:.:......x.....:........:..:..:x.:.....x::...:..:x...x.x.x.:...:...x.............x.:x:...:...x.x..................:x.. 158M 120/158 75.9% 158/94230402 0.0% 0/158 0.0% 130887148 59327407 +3057 chr4 + 190214555 184113838 184113837 184113914 77 GCCCTGTACATATTTCTTTTTATCTCTCTCTCTTTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTT chr4 - 94230402 45600392 45600391 45600468 48629935 48629934 48630011 77 GCTATGTTTGTATATCTGTCCATCTGTCTCTCTTTCCCTTTTTTCTATCTTTATCTTCTTTTATTCTTTTACACTTT ..:x...x::...x...x.::....x..........:....:..:.x:...:x.:.::..:.x......:x:x.... 77M 51/77 66.2% 77/94230402 0.0% 0/77 0.0% 138513446 51701109 +3109 chr4 + 190214555 184113855 184113854 184113928 74 TTTTATCTCTCTCTCTTTCTCTTT--CTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTTTTTCTTTCTTTCCCTTTTTCTTACT ....x.:.:.::.x:.......x.--.xx..:....x.x.......:::.:............::.:......x.. 24M2I50M 53/74 71.6% 76/94230402 0.0% 2/74 2.7% 127962305 62252250 +3109 chr4 + 190214555 184113871 184113870 184113951 81 TTCTCTTTCTTTTTCCTTCCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 73032485 73032484 73032565 21197838 21197837 21197918 81 TCCTGTTGCTTTTTCCTTGCTGTTTTTCTTTTCTTTGTTTTGTTTTCCCATCTTCTCCTTGTCTATGTTCTCTATTATTTC .:..x..x..........x..x.:............x...:x..:.::.x.::.:..:..x.:.x.x.::.::x..x.... 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 111081386 79133169 +3699 chr4 + 190214555 184114041 184114040 184114118 78 CTGCAACCTCCGACTCCTGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCAC-CCACTG chr4 - 94230402 18197126 18197125 18197204 76033199 76033198 76033277 79 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTG ..:..:..:xx::..:...:.......::x...x.xx.x........::..................x.::.-...... 72M1I6M 57/78 73.1% 79/94230402 0.0% 1/78 1.3% 165916915 24297640 +3039 chr4 + 190214555 184116741 184116740 184116776 36 GAAACAAACACACACACACAAAACAAAACAAAAAAA chr4 - 94230402 7464492 7464491 7464527 86765876 86765875 86765911 36 GAAACAAACACACACACACAAAACGAAACAAAACAA ........................:........x.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 176652249 13562306 +10835 chr4 + 190214555 184116838 184116837 184117066 229 CCCACGGGTCTGTCTTGCCTCAGAGTGTTTCCCAGGGGCCGGCCAAAGGCTCACAACAGGCCCGCGGTCCTTCACTTGCTGCAGGTCATTCAGGCTGATGTACTTATTCAGCTCAATCACTTTGTCCATCCAGAAAATGTCGGTCATTCCGTGATCCGAGAAAATAATGACGTTCAGGCGGTCCTGCAGGCCCCGCTCCTGTGGGGTGGGAAAA-GACAGTCATTACGGC chr4 - 94230402 53227968 53227967 53228197 41002206 41002205 41002435 230 CCAACAGGTTGCACGTACCTCCGTGTGCTTCTCCGGAACTGGCCAAAGGCTCACAACAGGACCTCGGTCCTTCATTTGTATTGTATCACTCATATTGATGTAGTTTTTCAGCTCAATCACTTTGTCTGTCCAAGAGATGTCCGTCATCCCGTGATCAGAGAAGAGGAGGACATTGACATCATGCTGAAGGCCCTTGTTCTGTGAAGTGAGCACATGACAGCCATTATGGC ..x..:...:xxx.x.:....x.x...:...:.x..::.:....................x..x..........:...:xx::x:...:...x::.......x..x....................::....::.:.....x.....:........x.....:.x:.x...:..x.x::x:.x...x......:xx.:.....::...:.x.x.-.....:.....:... 214M1I15M 165/229 72.1% 230/94230402 0.0% 1/229 0.4% 130888870 59325685 +7057 chr4 + 190214555 184117757 184117756 184117937 181 ACCTGGATCCACTTGGTCATGTACTTCAGGACAGTGTCTACAGCCTTGAGGGCATCTTTCCTCTGCGGAGATGCAGGCCCGTAGTGGTGGCCTTCCACGTCAATGCGCTCATGGTATATGGCTGCCAGGTCGGCCCGGCCACTCCTGGAG---GGACAGAGGAGAGAGG----CATAGGTGAGGGAGG chr4 - 94230402 53229419 53229418 53229606 41000797 41000796 41000984 188 ACCTTAATCTGTGTGATCATGTTGCTCATGGCTTTGTCCAGCTCCTTCAGAGCACTCTTCCGCTGCTCAGACCAGGGCCCATAGTGGTGGCCTTCCACATCGATACGCTCGTAGTACACAGCTGCCATTTCAGCGCTGCCATTGCTGGAAGTTGGAGGGAAGGGAGAGGATGATGCATGTGGGGGTGG ....x:...:::x..:......xx:...x.:.xx....:.xxx....x..:...:::....x....xx...:xx:.....:.................:..:..:.....:.:...:.::.......xx..:..x.x....:.x.....:---...x:..:.:......----:::.x...:...x.. 150M3I16M4I15M 124/181 68.5% 188/94230402 0.0% 7/181 3.9% 130888338 59326217 +6247 chr4 + 190214555 184124143 184124142 184124296 154 AGAGTTTGGGACACTTACTTGAAGGAGTCAAGAGCATCGCTGACTGCATTGGCAAAATTGATATCCGTTGGGACATTTTTATATTCTAGGCAGTAGGTGGGTCTGACACCCAGAATCTCAACCTCACAGCCTGAGAAGGAAAAAGATGGCAAAT chr4 - 94230402 53232127 53232126 53232280 40998123 40998122 40998276 154 AGAATTTTAATGACGTACCGGAGAGCCTCGAGAGCATCGCTGATAGCGTCCGCAAAGTTTTGGTCTGTTGGGACACTGAAGTATTCGCGGCAGTAACTTGGCCTGACTCCAAGGATTTCAACCTCACAACCTACGAATGAGAAATGTGGTAGGT ...:...x::xx..x...:x..::.xx..:.............:x..:.:x.....:..xxx:..:.........:.xxx:.....xx.......:x.x..:.....x..x..:..:...........:...:x...x..:...x:...:.::. 154M 104/154 67.5% 154/94230402 0.0% 0/154 0.0% 130892016 59322539 +3133 chr4 + 190214555 184131159 184131158 184131225 67 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTT chr4 - 94230402 9693768 9693767 9693834 84536569 84536568 84536635 67 TTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT .....:..:..::.:.::....:..::.:x...:..x.:...x..x...:........::....::. 67M 45/67 67.2% 67/94230402 0.0% 0/67 0.0% 174437391 15777164 +3412 chr4 + 190214555 184131183 184131182 184131275 93 TTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTTC chr4 - 94230402 18988810 18988809 18988902 75241501 75241500 75241593 93 TTCATTGTCCCTTATGTTTTGCTTTCTCTGGTCCTATTTTTTTCTTTCTTCCTTTTTCTTTCTGTCTATAATTCCTATTTCCTGTCTACCATC ...x..x.::...x:x..:.x......:.xx.:..x...:..........:.:..........x...x.xx:.:::x:.....x:..x..x.. 93M 62/93 66.7% 93/94230402 0.0% 0/93 0.0% 165142373 25072182 +4639 chr4 + 190214555 184131187 184131186 184131373 187 TTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC------CTTCCTTTCTCTCTCCTCTCTCTCTTTCTTCTTTCTTT-CTTTCTTTTCTTTCTTCTTTCTTTTTTTTTGA chr4 - 94230402 69435960 69435959 69436151 24794252 24794251 24794443 192 TCCTCTTATTCTTTCTTGTTTCTTTTTAACCCT--AATTGTTTAGTGCCTTTTTCTACTATCATTTTCCAACTGTTCCTCCATGCTTCCTCTCATGTTTTCCTCATTTCCCTTTCTCTGGACTCTTTTTACCCTTTTCCTCACTCTGTTTTTTCTTTCTCCACTCTTTCGTAATGGGTCTTACTTCTTTTCTGA .:..:.:x.........x.......:.xx.::.--xx..x...xx.x......::.x..x..x..:..:xx..x.....:.x.x.:.:.::..x.x::.....:x:....:.:::..------...::.x:.::.:.....x....x...:........::-..:.:.:x.xx.xxx....x...:....:... 33M2D82M6I38M1I32M 117/185 63.2% 192/94230402 0.0% 9/185 4.9% 114695227 75519328 +3062 chr4 + 190214555 184131190 184131189 184131265 76 TTTCTTTCTTTCTTCTTTCTTTCTTTCT-TTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTCTCTTTCTCTTCCT chr4 - 94230402 56151550 56151549 56151625 38078778 38078777 38078853 76 TTTTTTTTTTTCCATTTTCTCTGTGACAATTCCCTTGCATTCTTTCCCCTT-TTTCTTTCTTTCCCTTTTTCTTACT ...:...:....:x:.....:.x.xx.x-..::...x.x........::..-............:....:....x.. 28M1I22M1D25M 56/75 74.7% 76/94230402 0.0% 2/75 2.7% 127979640 62234915 +3176 chr4 + 190214555 184131802 184131801 184131861 60 CACACACACACACACACACACACATATATATATATATAAAGAGGTATATTATGAGGAATT chr4 - 94230402 87372747 87372746 87372806 6857597 6857596 6857656 60 CAAACACACACACAGACACACACATCTATACGTATGTACGTATATATTTCTTGAGGAATT ..x...........x..........x....::...:..x:x.x:...x.:x......... 60M 46/60 76.7% 60/94230402 0.0% 0/60 0.0% 96759055 93455500 +3408 chr4 + 190214555 184132708 184132707 184132838 131 AGGAATTACCTAGAATTAATTTTCATATATGGTA----TTAGATAGTCAGAAGATGTATATATAGATACACATATATACATATATACACACATATATATACATATATACATATATACACACACACACACACATAT chr4 - 94230402 27943498 27943497 27943628 66286775 66286774 66286905 131 AAAAAATATTTAGAATAGATT---GAATATGGAACAAATAAAATAAGCATACACTG-GTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACGTGT .::..x..::......x:...---:x......x.----.x.:...:x..x.x:x..-:.:..:.x..:....x:.:.:..x....:....::...:.::x.......x..x..:.x....:...:x.....:.:. 21M3D10M4I18M1D78M 83/127 65.4% 131/94230402 0.0% 8/127 6.3% 156189210 34025345 +3397 chr4 + 190214555 184132763 184132762 184132829 67 ATATAGATACACATATATACATATATACACACATATATATACATATATACATATATACACACACACA chr4 - 94230402 7596413 7596412 7596479 86633924 86633923 86633990 67 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCA ...:....:..:.:.x..::.....:....:...:....:.x.:......x..:::..:...:.x.. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 176536350 13678205 +3096 chr4 + 190214555 184132807 184132806 184132856 50 ATATACATATATACACACACACACACACATATATATATATATATATATAT chr4 - 94230402 61485373 61485372 61485422 32744981 32744980 32745030 50 ATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATAT .........:.........::.....x::.:.:...:...:...x..... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 122647434 67567121 +4680 chr4 + 190214555 184150278 184150277 184150427 150 TCTACCTGACAGGAAGACTTGAACTAGTGCCATTTCTAAATTGCACTTCTAAATATTGACTTAATGGCGAAACTCAGCGTGTCATAACCCAGTTCACTAGAGCAACGAAGATTTTCCAGGC---CTCACCGAGAGGTCTGTACAATATCCTGT chr4 - 94230402 53234824 53234823 53234964 40995439 40995438 40995579 141 TCTATCTGACATGGAGACTTGAGCCTTTGCCAATTATAAATTGTGTTTCTAAACATTGATTTAACAGTTGGACACTTCGTGTCATAACAA--------AAAGTTTTGACAACTTTCCAGACTAGCTCCCT----GGTCTGGAAAATGTTGTGT ....:......x.:........:.:xx.....x..x.......:::.......:.....:....::.:x::..x.xx...........xx--------.:..:xx:..x:.:.......:.---...x.:----......x.x...:.:x... 90M8D23M3I6M4D19M 97/138 70.3% 141/94230402 0.0% 15/138 10.9% 130915454 59299101 +12278 chr4 + 190214555 184153541 184153540 184153771 231 TTCACACACTCACCTGGCCAGTAGTACATGTAGACCTTCCTTTTGGCCTTGGTCAGAGTGACCCACAGAGGTTCTGATCCATTCCACCAGAGAGGCATTAGGCTGTCTTTGTTGACGCCAATGTCAAAGGACTTGTTGGTGGTGGGGTCCCACATGTAGTTCCCGATCATCTGATGGACTTCACAATGGCGGCCTATGT-------CAATGAGAACACAGCTGTCAGTTTACGGTTCT chr4 - 94230402 53237716 53237715 53237953 40992450 40992449 40992687 238 TTGGCATACTAACCTGGCCAGTAGTACATGAAAACATTCTTTTTTTCTTTCGTCATTGTGACCCACAAAGGCTCCGATCCATTCCACCAGAGAGGTAGGAGGCTTTCTTTATTCACACCAATATCAAACGATACGTTCGTCTTTGGGTCCCACATGTAGTTTCCAATCATCTGATGAACCTCACAGTGGCGACCTATGGGGAGGGAGAATAAGAAGAGCACCGTCAGACCCCCATTCT ..x:..:...x...................x.:..x...:....xx.:..x....xx..........:...:..:....................:.xx.....x.....:..x..:.....:.....x..:x:...x..xx.x.................:..:...........:..:.....:.....:......x-------x...:....x.xx:.:.....x::x.x:.... 199M7I32M 178/231 77.1% 238/94230402 0.0% 7/231 3.0% 130915825 59298730 +3027 chr4 + 190214555 184157397 184157396 184157455 59 TTCGTTCTTTCTCTTTCTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTTCTTTCTCT chr4 - 94230402 88442039 88442038 88442097 5788306 5788305 5788364 59 TTTGTCTTTTGTCTTTCTTTCTACCTTTCTCACCTTTTCTTTCTTAGTATGCTTTGTTT ..:..::...x...........x:......:x.............xx.x.x....x.:. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 95715358 NA +3011 chr4 + 190214555 184157404 184157403 184157473 70 TTTCTCTTTCTTTCTTTCTTTCTTTCCTTTTCTTTCTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTCCTT chr4 - 94230402 28307740 28307739 28307809 65922594 65922593 65922663 70 TTCCTCTTTTTTTCCTCTTTCCATTCCTTTTCCTTTTTTTTGTCCTTTCTATAGAATTCTCAACTTTTTT ..:......:....:.::..:.x.........:..:...:.x.:......x.xxxx....:xx...::.. 70M 48/70 68.6% 70/94230402 0.0% 0/70 0.0% 155849664 34364891 +3645 chr4 + 190214555 184157404 184157403 184157534 131 TTTCTCTTTCTTTCTTTC-TTTCTTTCCTTTTCTTTCTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTCCT---TTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTTCTCT chr4 - 94230402 45185616 45185615 45185750 49044653 49044652 49044787 135 TTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT .....x:...x.......-........x....::x:.......:.:.:.:.xx.....:.:..:..:x..---.x.:.:..x:.x...x::..:..xx.:x:..::xx.:...:x.......:::..:xx...:. 18M1I51M3I62M 83/131 63.4% 135/94230402 0.0% 4/131 3.1% 138971788 51242767 +3298 chr4 + 190214555 184157425 184157424 184157531 107 CTTTCCTTTTCTTT-CTTTCTTT--TCTTTCTCTCTCTTTCTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTTC chr4 - 94230402 7499840 7499839 7499949 86730454 86730453 86730563 110 CTTTCCCTTACTTTGCATTCTTTAGTATATTGCAAGATATGTTTCCTGCTTTTTCTCCTTTGCTCTCCTTTTCTTCATTTGCTCTTAACCTGCCTCCTTTTTTTTCTTTC ......:..x....-.x......--.x.x.:x.xxxx.x.x......x.:...:..:::..x.::......:...:x...x.....xx:..x::..:....:........ 14M1I8M2I85M 73/107 68.2% 110/94230402 0.0% 3/107 2.8% 176657585 13556970 +3100 chr4 + 190214555 184157431 184157430 184157530 100 TTTTCTTTCTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTT chr4 - 94230402 72415627 72415626 72415722 21814681 21814680 21814776 96 TTTTCTCTCTTTTTGCTCTATATTTCTCTGGCTATTCTTTTATGTTTTTCTTTCTTTCCCTCCCTTTGGTGC----TCTGCAGTTTCTTTTACTACATTT ......:.....:.x:...x.x.:.....xx..x.:...::x.x::........:....:.:.....xx.x.----.:.x.xx........x..x:x... 72M4D24M 65/96 67.7% 96/94230402 0.0% 4/96 4.2% 111741804 78472751 +3162 chr4 + 190214555 184157458 184157457 184157534 77 CTTTCTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTTCTCT chr4 - 94230402 87548333 87548332 87548409 6681994 6681993 6682070 77 CTTCCTATCCTACTAGTCCTATCACATTCCCTTTTCCTTCTTGCTCTGTTTTTATCTTTCATTTTCTTTATTTCTCT ...:..x....x.:xx....x..x:x::::.:.......::.x::..x.....x......x........x....... 77M 53/77 68.8% 77/94230402 0.0% 0/77 0.0% 96609125 93605430 +3675 chr4 + 190214555 184157481 184157480 184157620 140 TTTCCTTCCTTTCCTTTCTTTCCTCTTTTTCTCTTTCTTTTTCTTTCTTTCTCTCTCTCCTTTCTTTCCTTTCTCTCTTTCTTTCCTTTCTTTCCTTTTTTTCCTTCCTTTCCTTTCTTTCCTTCCTTTTCTCTCTCTTT chr4 - 94230402 51102255 51102254 51102393 43128010 43128009 43128148 139 TTTCTTTATCTTCTCTTCCATCTACCCATTCTAGTTATTTCTTTTTCCTGCTCTCTTTATTGATTCTTATTTCCTCTTCTCCTTTCCTCCATACCTTTTTATCTATTCATATCTGT-TTTCTTTGCCCATCTGTGTCTTT ....:..x::...::...:x..:x.::x....xx..x...:.:....:.x......:.x:.xx:.:.:x....::::.:..:..:.:.:.x.x.......x..:x.:.x.x:..x.-....:..x.::x...x.x..... 116M1D23M 84/139 60.4% 139/94230402 0.0% 1/139 0.7% 133055226 57159329 +3138 chr4 + 190214555 184157502 184157501 184157552 51 CCTCTTTTTCTCTTTCTTTTTCTTTCTTTCTCTCTCTCCTTTCTTTCCTTT chr4 - 94230402 28071374 28071373 28071424 66158979 66158978 66159029 51 CCTCTATTTCTGCCTCATTTCCTCTCTCTCTCTCTTTTCTTTTTTTCCTTT .....x.....x::..x...:..:...:.......:.:....:........ 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 156086128 34128427 +4004 chr4 + 190214555 184157508 184157507 184157656 149 TTTCTCTTTCTTTTTCTTTCTTTCTCTCTCTCCTTTCTTTCCTTTCTCTCTTTCTTTCCTTTCTTTCCTTTTTTTCCTTCCTTTCCTTTCTTT---CCTTCCTTTTCTCTCTC----TTTCTCTCT-TTCTTCTTCCTGATCTCACTTTGTCACCCA chr4 - 94230402 45185576 45185575 45185730 49044673 49044672 49044827 155 TTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTT--CTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTA ...x.x:..x..x:..x..:.::....::..xx.:..xx.::.:.x::..x.......:........x.....:x....:...--........---:.....:......x..:----:.....x..-:.:x....:..:.:.x.x.:.x:..x.::. 83M2D8M3I17M4I9M1I30M 98/147 66.7% 155/94230402 0.0% 10/147 6.8% 138971932 51242623 +3087 chr4 + 190214555 184157530 184157529 184157578 49 TCTCTCTCTCCTTTCTTTCCTTTCTCTCTTTCTTTCCTTTCTTTCCTTT chr4 - 94230402 28071376 28071375 28071424 66158979 66158978 66159027 49 TCTATTTCTGCCTCATTTCCTCTCTCTCTCTCTTTTCTTTTTTTCCTTT ...x.:...x.:.:x......:.......:.....:....:........ 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 156086154 34128401 +3327 chr4 + 190214555 184162494 184162493 184162595 102 TCTACTTTTGAAAGAAGGAAAGAAGGAAGAAAGGAAGGAAAGGGAGGGAGGGAAGAAGGAAGGA-------AAGAAGGAAGGAAG-GAAGAAAGGAAGGAAGAGAGGGAG chr4 - 94230402 76099065 76099064 76099170 18131233 18131232 18131338 106 TTTGCTCCTGATAGA--GAAAGA--GAAGAGGTGAGGGCTGGGGAGGGAGTGAAGAAGAAAGGGGGAGTTCGAGGAGGCAGGAAGAGAAGAATGAAAAAACGAGCAAGAG .:.:..::...x...--......--.....::x..:..xx:.........x.......:....:-------:..:...x......-......x.:..::.x...x::... 15M2D6M2D39M7I14M1I24M 72/98 73.5% 106/94230402 0.0% 12/98 12.2% 108063429 82151126 +4475 chr4 + 190214555 184166148 184166147 184166328 181 AATGAAATATGCAAGATTGAGGTGAAAGCAAAGCTCACAATTTGCACATCTTTAAAAGCAACTCCTGATGTATGTGCCAGACACAGTCATCGTTAGATTCTGAGACACAAATATTGTAAGGCTGAGATAATGGGCTTTGATTATAGTGTG---AAGTGTAGGGACTGCAACAAAAATAACCCCA chr4 - 94230402 53239036 53239035 53239219 40991184 40991183 40991367 184 AACAAAATGTTACAGATTAAATTGTACTGGAAGATAATGATTTCCTCATCTTAAAAAGCAACAGCTAATGTATCTGTGAGACACCACCATCATTACCTGGTGACTCATGACATTTCAAGGATCCAGATTACAGACATCGATTACCATGAGAACAAGTGTGGTGAGCAGAACTGAAATGACCTCA ..::....:.xxx.....:.:x..x.xxx:...x.x.::....x.x......x.........xx..:......x..:x......x::....:...xx.xx...xx..::.xxx..xx.:.:::x....x.::.:.x.:.....:x:..x.---......:.x..x::x...x:....:...:.. 150M3I31M 112/181 61.9% 184/94230402 0.0% 3/181 1.7% 130927112 59287443 +10012 chr4 + 190214555 184217573 184217572 184217762 190 ACTCACCAGTCATTAGGGTATAATAATTGGGATACGAGAGACTAGGGAAGTCTGGAGTCAAGTAATCCACTTTTACTCCCCTGCTCACAATCTCTTTGAAACCAGGCAATGACTCCAGCGCCTCATCACTGATGTAGTCTGAGCGAAAACCATCCAGCAGAAACACCAGCAGCTTCCGGCGGGCAGAGGC chr4 - 94230402 53246885 53246884 53247074 40983329 40983328 40983518 190 ACTCACCCGTCATCAGCGTGTAGTAGTTGGGGTAGGAGAGGCTGGGGAAGTCGGGGGTCATGTAGTCCACCTTCACCCCCATGCCGATGATGTCCCGAAAGCCCGGCAGGCTCTCCAGCTCCGCGTCGTCGATGTAGTCGAAGCGGAAACCGTCGAGGAGGAAGAGCAGCAGCTTGCGGTGGGCAGAGGC .......x.....:..x..:..:..:.....:..x.....:..:........x..:....x...:.....:..:..:...x...:x.::..x..::x:..:..x....:xxx.......x..x.:..:::.........x:....:.....:..x..x..:..x.x.........x...:.......... 190M 140/190 73.7% 190/94230402 0.0% 0/190 0.0% 130970688 59243867 +3053 chr4 + 190214555 184219618 184219617 184219685 68 AGAAAAAGAAAAGAGAGAAGAAAGAGGAAAGGAAGGAAGAAAGAAAGAAAAAGGAAAGAAAGAAAAGT chr4 - 94230402 20475871 20475870 20475938 73754465 73754464 73754532 68 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAAT .:.....:....:.:.:.....:..:.x....x.......x.x.x..:..x.x:....:..x.x..:. 68M 48/68 70.6% 68/94230402 0.0% 0/68 0.0% 163743747 26470808 +3926 chr4 + 190214555 184219621 184219620 184219723 103 AAAAGAAAAGAGAGAAGAAAGAGGAAAGGAAGGAAGAAAGAAAGAAAAAGGAAAGAAAGAAAAGTAAACGAAGGAAGGGAGAAAGAGAAAGAAAGGGAAGGGA chr4 - 94230402 55334412 55334411 55334513 38895890 38895889 38895991 102 AGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAG-AGGTGATGCAAAGGGTTGAGA .:....::..:......x..x.x:x...........:....x.x.:........:...:..x:.x:x.:..:....::...-.:.x..x:x......xx.:.. 81M1D21M 70/102 68.6% 102/94230402 0.0% 1/102 1.0% 128885209 61329346 +3049 chr4 + 190214555 184219629 184219628 184219684 56 AGAGAGAAGAAAGAGGAAAGGAAGGAAGAAAGAAAGAAAAAGGAAAGAAAGAAAAG chr4 - 94230402 536629 536628 536684 93693719 93693718 93693774 56 AGAGCGGGGAAAGGGGAAAGGGAGGGGGAAATGAAAAGAAAGAAAACAAAACAAAG ....x.::.....:.......:...::....x:..:.:....:...x...:x.... 56M 41/56 73.2% 56/94230402 0.0% 0/56 0.0% 183683000 6531555 +3481 chr4 + 190214555 184220048 184220047 184220139 92 GAAGAAGGGAAGAAAAG--CGAAGAAGGGAAGGGAAGGGAAGGGAAGGGGAGGGGAAGGGAAGGGAGGGAAAGAAGGGAAAGGAAAGGGAAAGG chr4 - 94230402 40465775 40465774 40465868 53764535 53764534 53764628 94 GGAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .:........x..x...--:..::..:..x..:....x:.:.....:x..:x.x.:.....:..:.:.:::.:.:.:..::.....::.x..:. 17M2I75M 59/92 64.1% 94/94230402 0.0% 2/92 2.2% 143754273 46460282 +3267 chr4 + 190214555 184220054 184220053 184220144 91 GGGAAGAAAAGCGAAGAA--GGGAAGGGAAGGGAAGGGAAGGGGAGGGGAAGGGAAGGGAGGGAAAGAAGGGAAAGGAAAGGGAAAGGGGAAG chr4 - 94230402 40465776 40465775 40465868 53764535 53764534 53764627 93 GAGAAGGGATGACAAGAATGAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAG .:....::.x.xx.....--:.:..:..x..:....x:.:...:.:x..:x.x.:.............:.::.:::..::..:...:.x:... 18M2I73M 58/91 63.7% 93/94230402 0.0% 2/91 2.2% 143754278 46460277 +3284 chr4 + 190214555 184220122 184220121 184220176 55 GGAAAGGAAAGGGAAAGGGGAAGGGGAAGGGAAGGAAAAAAAAGAATAGAAGGGA chr4 - 94230402 19799668 19799667 19799722 74430681 74430680 74430735 55 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGGA ..........:.::.x:.........:....:.:......::.:..x.:..:... 55M 41/55 74.5% 55/94230402 0.0% 0/55 0.0% 164420454 25794101 +3113 chr4 + 190214555 184220152 184220151 184220226 75 GAAGGAAAAAAAAGAATAGAAGGGAAGAAGGGAAGGGAAGAGAAGAAGGGA--AGAAAAGCGAAGAAGA--GAAGGGAA chr4 - 94230402 40472541 40472540 40472619 53757784 53757783 53757862 79 GGGGGAAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAA .::.............x.:....:..:..::.:....::.:.::.::....--x:.:.:.:...:....--....:... 51M2I16M2I8M 52/75 69.3% 79/94230402 0.0% 4/75 5.3% 143747611 46466944 +3235 chr4 + 190214555 184220217 184220216 184220315 99 GAGAAGGGAAGGAAAGGGGCGGGGAAGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAAGGAAGGGAAGAAGGGAAGAAGAGAAGGAAAGGGAAGGT chr4 - 94230402 40465776 40465775 40465869 53764534 53764533 53764627 94 GAGAAGGGATGACAAGAAT-----GAGAAAAGGTAGAGAAGCAAGGGGAAATGGGTGTGGAGGGAGGGAAAGAGGAAAGGAGAGGGGAAAAAGCAAAGT .........x.:x...::x-----:..::.:..x..:.:..x:.:.....:x.::x.x::...:......::...:...:....::.:...:.x..:.. 19M5D75M 59/94 62.8% 94/94230402 0.0% 5/94 5.3% 143754441 46460114 +3069 chr4 + 190214555 184221611 184221610 184221687 77 TGAGATGGAAGGGAA--AGAGTCTCAGAAAAACAAAACAAAACAAAACAAAATAAACAAACAAAAAACACAAAAAAAAC chr4 - 94230402 29321528 29321527 29321602 64908801 64908800 64908875 75 TAAAACAGAAGGGAATTAAGG----AGAAAGAGCAAATAATTTAAAACAAAACAAACAAAAAAAAAAAACAAAAAACAC .:.:.::........--.::.----.....:.xx...:..xx:.........:.......x......x........x.. 15M2I4M4D54M 56/73 76.7% 75/94230402 0.0% 6/73 8.2% 154900083 35314472 +3035 chr4 + 190214555 184229980 184229979 184230028 49 CTTTGTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACAC chr4 - 94230402 51342060 51342059 51342108 42888295 42888294 42888343 49 CTTTAAATCTCTGTCTCTCTCTCTCTCTCACACACACAATCAAACTCAC ....:xx.....x.........................xx..x..x... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 132887920 57326635 +3013 chr4 + 190214555 184231370 184231369 184231419 50 CCTTAAAATAGTGTCACAAAAATTATAATAAAATCACTGTATAAGCAAAT chr4 - 94230402 86196346 86196345 86196395 8034008 8034007 8034057 50 CTTTAAAACAGTGTAATAAAAATTACTATAGAAGCATTGTACAGGCAAAT .:......:.....x.:........:x...:..x..:....:.:...... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 98035024 92179531 +3075 chr4 + 190214555 184267364 184267363 184267431 68 GTATTCAGTATGTATATGTGTGTGTGTATGCACATGTATACATCTGTACACACATACACATGCACACA chr4 - 94230402 14964810 14964809 14964877 79265526 79265525 79265593 68 GTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACA ..:..xx.x.:::.x..:...x..:..:......:..:..::.x.:....xx..:............. 68M 47/68 69.1% 68/94230402 0.0% 0/68 0.0% 169302554 20912001 +3289 chr4 + 190214555 184267370 184267369 184267448 79 AGTATGTATATGTGTGTGTGTATGCACATGTATACATCTGTACACACATACACATGCACACAGTTGACCCTTGAACAGG chr4 - 94230402 14964824 14964823 14964899 79265504 79265503 79265579 76 AATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTGAC---TGAATAGG .:.....x.::.....::::::..:.::.:......x.:::.....:::.....::.....x......---....:... 68M3D8M 51/76 67.1% 76/94230402 0.0% 3/76 3.9% 169302546 20912009 +3778 chr4 + 190214555 184273835 184273834 184273940 106 TTAACCCTCGAAAGAACCCTCTGAGG--AGTGACTGTTCTTAGC-CCATTTCACAGATGAGGAAACTGACGCTTAGATAGGTTAAATGACTTGCCCCATGCC-----ACAGAAT chr4 - 94230402 10729161 10729160 10729274 83501129 83501128 83501242 114 TTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTCTGGGTACAGAAT ..x.x....:x..x.x....x.....--:..:.:.::.x.:...-......:....:..:.:.......x..x:.x.:.......:.:.:......x:x.:.-----....... 26M2I16M1I57M5I7M 76/106 71.7% 114/94230402 0.0% 8/106 7.5% 173544674 16669881 +3064 chr4 + 190214555 184292450 184292449 184292500 51 TGTCTGTGTGTGTGTATGTGTGTGTGTATGTGTGAGTGTGTGTACATATGT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT ...xx..x...:.:..:::.............x...........:....:. 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 136202953 54011602 +3014 chr4 + 190214555 184316087 184316086 184316176 90 CTCCTCCTCCTTCTTCTTCTTCTTCTCCTTCTTGTTTCTCTTCCTCCTTTTCCTCTTCCTCTTCTTCTTCCTTTTTCTTCTTCCTTTCTC chr4 - 94230402 79653018 79653017 79653107 14577296 14577295 14577385 90 CTCACCTTTCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTTTATCTC ...x:.:.:..:x::.:.::...:..x.:.x:.x....xx....:.x...::...........:.x:::.::.:x.....:.::.x.... 90M 54/90 60.0% 90/94230402 0.0% 0/90 0.0% 104663069 85551486 +3124 chr4 + 190214555 184316166 184316165 184316241 76 CTTCCTTTCTCCATTTCCTTCCCTTTCCCCTTCCCCTTCCCCTCCTTCTCCTTCTCCTTCCCCTTCCCCTTCCCCT chr4 - 94230402 20485614 20485613 20485685 73744718 73744717 73744789 72 CTTGCTTTCCAC----CCCTGCCCCACCCCCCCCCTTTTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTT ...x.....:x.----..:.x..::x....::...:..:...:::.....:...:....:.....:.::..:..:. 12M4D60M 49/72 68.1% 72/94230402 0.0% 4/72 5.6% 163830552 26384003 +3238 chr4 + 190214555 184322113 184322112 184322158 46 TATATATATATACACACACACACACACACACACATAATATTTAATA chr4 - 94230402 21704674 21704673 21704719 72525684 72525683 72525729 46 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .........:...................::::....x..x..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 162617439 27597116 +3238 chr4 + 190214555 184322113 184322112 184322158 46 TATATATATATACACACACACACACACACACACATAATATTTAATA chr4 - 94230402 21701101 21701100 21701146 72529257 72529256 72529302 46 TATATATATGTACACACACACACACACACGTGTATAAAATGTAATA .........:...................::::....x..x..... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 162621012 27593543 +3829 chr4 + 190214555 184346477 184346476 184346559 83 CTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGTGTGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.:........::.x...x.xx.x.........:...........:.:....--:.........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 166149351 24065204 +3011 chr4 + 190214555 184372797 184372796 184372859 63 ATGTATATATGTATATACATAGGTATATATATGTGTATATATATACGTATATACATAGGTATA chr4 - 94230402 19637122 19637121 19637184 74593219 74593218 74593281 63 ATGGATAAATGCATATAAATTGATATATACATATCTATCTATGCATGTTTATGCATATGCATA ...x...x...:.....x..x.:......:..:.x...x...::.:..x...:....x.:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 164735675 25478880 +3069 chr4 + 190214555 184373046 184373045 184373106 61 ACACGTATATATACACCTATATATATACACGTATATATACACACCTATATATATGCACGTA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .:..:x..::.....xx.:......:.....:..:......x..x....:x..:.....:. 61M 44/61 72.1% 61/94230402 0.0% 0/61 0.0% 176776633 13437922 +3118 chr4 + 190214555 184373322 184373321 184373391 70 CTATATATATGCACGTATATATATACCTATATATGCACGTATACATATATGTGTATATATATATATATAT chr4 - 94230402 50941849 50941848 50941918 43288485 43288484 43288554 70 CTTTAAGCATGTTAGTCTTTAAATCTCTATATATGCACAAACACATATATGCATTTATACATGTATATAT ..x..x::...:xx..x.x..x..x:............:x.:.........::.x....:..:....... 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 133431473 56783082 +3028 chr4 + 190214555 184375134 184375133 184375184 51 CATGAGGTCAGGTTTTGCCTTGTGGGCCAGTTTGAGAATTGGCTTATTCAT chr4 - 94230402 72587417 72587416 72587467 21642936 21642935 21642986 51 CATGAAGTAAGAGTTTGCCTTGTAAGCCAGTTTGAGTCTCAGCTTATGCAT .....:..x..:x..........::...........xx.::......x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 111787717 78426838 +3321 chr4 + 190214555 184376858 184376857 184376920 63 CCTGAGGATTATCTGTGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTTTACCTTTAAAGC chr4 - 94230402 27486712 27486711 27486776 66743627 66743626 66743691 65 CCTGAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAAAGC .....:..:.:x...................--..x...x....:x:...:.:..::.x...... 31M2I32M 49/63 77.8% 65/94230402 0.0% 2/63 3.2% 156890146 33324409 +56916 chr4 + 190214555 184387722 184387721 184389068 1347 TTAAAAATTTAACTATATATCATATTCATTTATTATCAATCCACAGGAAAATCTGATTGCTACATGAGCTCATAAAAGCTTTTTTCACCTTTACAAAATTAAAAAAAAAAA-----TGTGCCACAAGGATGTAATAACAACTGCTGATAAACAAGAAAAGGAATCTTAAAATTATAAATTTGCTGTAGAAAAGATAAAAAACAATTATATTTTATTTAGAATTTTACCTTGAATAAAATATTCCCCTGTATAAAAAATAAAAAAGCTTGCTCTGGTTAGAATTAGAGTATTTTTGTC------TTCAAATCTGGGAATTTGCATAATATTTCCATGATA-----CTTTTTCCT----TTGTACCGCGTGGCATTCAAGCATAGCAGATTAGAAG----------GATTTTTTTTAAAGCAGTCTGAAAATGG--GACATCTGTAGAGAAATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATAGGAAGAGAGGCTGGGGAATGGGCAGAGAAGGGGGTGCTGAGTGTGCTGTGAGATAGAGCAAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAA-GATAAGGTGCAGAAGCAGACTGCAATGTCGCTAGTGCTGC-CTATGTACA-TATTCACAAGAA---------------TAAAAA-ATTCCAGCTAGTTCACATTATCTCGTCCGTTCTGAGGCATCCACTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGT-------TGGTCCTT-------------GAACTTG--AGTGAG---------------------------TAGC--CCTGGGAGATCCAGCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTT--TTCCCTTAGATTTGTCTAAAATAGGTGTCAGAG--------------AGAAAAAAATAAAATACAAACAAACAACAAAACAAAGCCAAGAAGCCCCAACAACCACCGCGGAGAGTCAGAGGCTTAACAGCTCTTGACGCGGGCCTGGGTGATATCCGATGTTTTCTTGATGACGCTGGCCCGGGTCTCCCGGTCTGGCCGACTGCTGCT---GGATGCTGGGGTCATGGAGGAAGAAAGGGGGAGGTCTTGAAAAGGGGGCCAGGAGCTGTTGTAAGGCACCGGATTGCTCTCCTCTTTGATGGTGACCTGGAGGTCCGGTTTGTTGGAAGTGACGAAGGACGCCATGCCGGGCAGCAGGTAGGA---GCCTCGAGTCCCCATGTTGCTGAGGTACTGTTTGCCTTCAATATTCCTCTTCCGCCAGTGTGGCCGCCCCT chr4 - 94230402 53264405 53264404 53265765 40964638 40964637 40965998 1361 TTAAAAATTTAACTATATACCATATT----TATTATCAATCCACAGGATAATCTGATTGCTACATGAGCTCATAAAAGCTATTT-CACCTTTACaaaattaaaaaaaaaaaaaaaatGTGCCACAAGGATGTAATAAC---TGCTGATAACCAAGGAT-TGAATCTTAAAATTATAAATTTGCTGTAGAAAAGattaaaaaaaattatattcactttagaattttattttgaataaaatattCCCCTGTATAAAAAATAAAAAAGCTTGCTCTGGTTAGAATTAGAGTATTCTTCTTCTTTGTTTTAAATCTGGGAATTTGCATAACATCTCTGTAATAGGTTTTTTTTTCCCCCTATTGTACCACGCGGCATTCAAGCATAGCAGATTAGAAAACAAACACGAGA--------AAAGCAGTCTTAAAATGTATGAAATCCACATGGGAAGTTTTAACTTTCTTTCCTTTCCACTATT---------CTTT-----AAAGACACTTTAGCAA-------------------------------GAATAGCCTTGGAAAAGAATACAGG-TGGGGA-------------GGGACCTTCAATGTGCCATTAAGTAGAGCAAGGTAATAA-AAGGCCT-TTTGTAAGTGCTTTCTTAATAAGGTGCAGAAGCAGACTGCAACGTTGCTAGTACTGCACTATGTACAATATTCACAATAGatttttttttttatttaaaaatattCCAGCTAGTTCACATTTTCTCTTCCATTCTGAGGCTTTCAGTTC--CATCACAGCCTTGACAGCAAGAAGCGCAGCAGCACCACTTCCCTTGTGGTCAGTTGGTCCTCTTATGAAACACTGGAACCTGCAAGTGGGCCAAAGTTCTTGTTTTATTTTCCTACGTAGCAACCTTGCAAGTCCACCTGGGTTCAGATGTACACACTGAC-----GGCTGGAGTCCTGAGTTAAAAACA--CTCCGGCACTGGAGTCAGACACAGCAAT--GTTTGATATTGCCAAGGCTTTCTTTACCTTAGATTTGTCTAA--TGTGCGTCAAGGGTTGAACCTCTCCTAGAGAAACGTAAAATACAAAACCA-AACAAAACAAAGCTAAAAAACAC---------------ACTGTCAAAGGCTTAGCAGCTCTTGACTCTTGACTGGGTGATGTCTGACGTTTTCTTGATGACGCTGGCCCGTGTCTCGCGGTCCGGCCGGCTGCTGCTAGTGGAGGCTGTGGACACTACTTGTGGCAGAGGGATGTCTGGGAAAGGGGGCCAGGAGCTGTTGTAAGGCAGCGGGCAGCTTTCTTCTTTGATGGTGACCTGGAGGTCAGGCTTGTTG---GCTACAAAAGTAGCCATGCTGGGAAGCATATGAGAAGTGTTCCGCATTCCCAGATTGCTGAGATACTGTTTGCCTTCAATGTTTTTCTTCTGCCAATGAAGTCGTCCCT ...................:......----..................x...............................x...-..........................-----......................---.........x....:.x-x...................................x.....x.........:xx............::...............................................................:..x.:------..:....................:..:..::.:...-----:.......:----.......:..:.........................:----------..--------..........x......x--..x...:::.x:.:..x.:x.xx.:.....::.:.:.x:x.:.x---------....-----..:..x.xx.x:.x..-------------------------------.:..:.xx.x...x.:...x.x...-......-------------...::x:.x.:.....::.x.::.........:.x.:..-.......-.:............xx-:........................:..:......:....-.........-.........x.:---------------......-...................x....x...:.........x.:..x.:.--.x.xx::........x...:.x.::......x.x.....x.......-------.......:-------------....:..--....:.---------------------------....--...x.x.::....x.x..x.::...x::....:::x..-----....................:.x.--....:.:........::...........--:.x.xx.....:.........--..x................--.:x.:....::.--------------...:...x:...........xxx.-.............:..:..:.x.---------------.xx....:.......:...........x.xx.x.........:..:..:.......................x.....x.....:.....:........---...x....x..x..:x:xxx:x.:x..:....x....x.:............................x...::x...:..:.......................x..:......---.:x..:..:.xx.......:...x....x:.::..---.:::..x:.:....x:........:.................:..::.....:....:..x:.:..:.... 26M4D54M1D26M5I22M3D17M1D138M6I36M5I9M4I37M10I2M8D18M2I44M9D4M5D16M31D25M1D6M13D39M1D7M1D16M1I40M1I9M1I12M15I6M1I47M2D47M7I8M13I7M2I6M27I4M2I38M5D24M2D28M2D21M2I19M2D12M14I24M1D23M15D99M3I115M3D35M3I71M 1010/1237 81.6% 1361/94230402 0.0% 234/1237 18.9% 131123317 59091238 +3956 chr4 + 190214555 184390698 184390697 184390753 56 CTTACCTCGGCACTCTCTTCATCGCTGGGCACACTATCAGTCGTTTCGCTTTCTGT chr4 - 94230402 53267012 53267011 53267067 40963336 40963335 40963391 56 CTTACCTCTGCATTTTCTTCATCGCTTGGAACGCTGTCGGTCGTTTCACTTTCTGT ........x...:.:...........x..x..:..:..:........:........ 56M 47/56 83.9% 56/94230402 0.0% 0/56 0.0% 131123686 59090869 +11454 chr4 + 190214555 184398906 184398905 184399118 213 GACGCTTACCTGCATAGGAAGACACGGGGGAGATCTGCAGAGGGTAGAGCTCGCTCATGCTGACCGGCTGCTCGTCGCTCTCAGTGGTCACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTTGATTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTT-------CAAAGAAAAGACAGCCATCATGCAAAGTCTGCTGAC chr4 - 94230402 53271508 53271507 53271727 40958676 40958675 40958895 220 GATGCTTACCTGCATAGGACGAGACAGGGGAGATCTGTAGGGGGTACAGCTGGCTCATGCTGAGAGGCTGCTCATCGCTTTCTGTTGTCACCTCTACTACCTGGCAAACATCTGGAGGATTGGCAACTATCACCTGCTCCTCACTGCTGCCATCAAGGTGCGGCTGTCCTACAACTTGGAGTTGGAAGAAAAAAATATCGATTACTCATAATATGTCAAC ..:................x..x..:...........:..:.....x....x...........xx........:.....:..x..x...........x..:.......::.....x.......::..x...x.:..x.:....x..:...::..x..:..x.:..............-------x..::....:.:.x.x..:.:x..x.:.x..:::.. 177M7I36M 163/213 76.5% 220/94230402 0.0% 7/213 3.3% 131127398 59087157 +6866 chr4 + 190214555 184408154 184408153 184408287 134 TTACCTATGATGTTCACCGTACTATCCACTTCATTTTTTATAGTTGAAGTCAGGACCGCATACTCAGGAGAAAGATCACTTACTCCATTACTAAGCCCCAGAGATGACTCAACTGGTTCTTGCTAGGAAGAAGA chr4 - 94230402 53275411 53275410 53275538 40954865 40954864 40954992 128 TTACCTACAATGTTCACTGTACTGTCAACTTCATTTTTTATACTGGAGGACAGGA---AATAGTCAGAAGTAACATCATTTAGCCCAT---TAATCCCAAAAGATGATTCAACTGGCTCTTGCTAGAATGAAAA .......::........:.....:..x...............x.x..:.x.....---x...x....:..x..x....:...x:....---...x...x.:......:........:.........:.x...:. 55M3D30M3D43M 103/128 80.5% 128/94230402 0.0% 6/128 4.7% 131132743 59081812 +3420 chr4 + 190214555 184411966 184411965 184412031 66 CTTTCTTGGCTTTTAATTTTCTCCCCTTGCTCCAAAGATTAAAAAAAAAAAAAAAAAAAAAAAAGA chr4 - 94230402 27993093 27993092 27993158 66237245 66237244 66237310 66 CTTTCCTGTTTTTTCTTTTCTTTCTCTCACTTGAAAAATTAAAAAAAAAGTAGAAAAAAAAAAAAA .....:..x:....xx...::.:.:..::..:x...:............:x.:...........:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 156418873 33795682 +16832 chr4 + 190214555 184418525 184418524 184419591 1067 CCTTTACCTTTCTTAGAAGGCCGTTCTGATAGGGGCAGCATTCGGTAGACCCTGAAGGCATTATTTCCTTTCTTTATGCTTTTATCCTTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCATGTTTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTAACAAAAGAGACAAAGATTAAGAAAAAGAGA---------GAAAACATTAGATACAGAGGAAGGAATTTCTGGAAACACAGTATTGCTGGTCAGGCAGTATAAGGAAACCTTTTCACTCCATGCTAT--ACCTCCAGTGACCAA-----TCGTCCTGGT-GTACCTGGGGGT----GAGAAAGTTCTTGGGATGTGGGAATTT------------TGTTTTTAAAACCTG---AACAGTTCCAGTCAAACTGGGACAAGTTGGTCACCCTGGTTCTACTGAACAGCTTGAGGAAACTATAAATGCTGG-------------------AAGAATGGAGCATC--------AGCGTAAGAAAAATATAGAAGACTGAGAGGCTGCAAAGTCAACAGGCAGAGGGAAGCTGAGTGC-CTCTTTTTCATCTGACGCTCCAACAAAGTCCATTCCTGTAAACAGCTCCCTACGTAAAGGTTGTAATAAATACAGGTATTTCTGACTACCTTTTTGGGGGGGAGATAAATTTGACCAAAGTTTATAGCATCAGAACAACTGAGTTTCTATTCCCCGGTAACACCTAGGGAACTTCTTAGAATACCACATTTATAGGAAATTGAAGGACTAAGAGTGTATGGGATGAGGGGAGCATT-----------ACTTCTGAGGGCTGCAGTTTGTACCCCATGTGTCCTGGATGTGCCTAGGGACAAGTCACAGGTTTTTCAGAGCCATCTTCATGAGGTCATAAGCCAGGCTATTTTATGTGTAATAAAAACAAAACTAAGCAAGAGTGCCTTCCTCTATAAACGCCGCAGGGAGTTTTAGTACCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTGCATCTTTTTCCACATCCCACCCATGTCTAGCCGCATGCATCCAGGGGATCTGAAAAATCTTCTTTTCCTGAAAAAAAAAAAAAAAAAAAA chr4 - 94230402 53281614 53281613 53282537 40947866 40947865 40948789 924 CCTCTACCTTTTTTGGATGGTCTTTCAGATAATGGCAGCATCCGGTACACCCTGAAGGCATTGTTTCCTTTCTTTATACTTTTGTCCTTCACTTCTTCTATATCAGGCAGAGAGTTCATAGCACACCGGAAGTTTGCCTTCCATGTCTTTGGGTCGGGTTTATCTACTCCTGACTGGTATTTTCCTAAGCAAGAAAAGAGAG-TTAAGCATATATGATGCGTAACCGAAAACCTAAGATAAA-------------CTAGTAACAGCGTA-----GGTTA----------------------ACTTCAAGGTATTGGCCTTTGGTTGTCAAGGCAGGCATTCAAACAGCAGCCGAGGTTGCAAGAGAAAGT-----AGATGTTGTGATCTCATTCTCATGCATGTTTCCAGAACACGATTAACAGTTTCTGCCCAAGAAAGACC--TAGGGCACTGCAGATCAGATGCAACTTTTCAGCAACATGGAAAAGCTTGCGCAGCATTTACCTTTATTAAGTCTGGCTCAACTCCATCGAAGCACATGAAAAGCCTAAGGGACT--AAGTCTACAAAGT----------------GCTGAGCATGCTCTACTCCAAGTGATTTT------GAACCCGATCTTGTTAACA----------------TTTAAATCAATTAAG-----TTTTACTGTGCTTCTGGATG-----------------------------------CAAATGAGTTACGGCCATTCAGTAA-AGCTGG----------AGATTACTGCA-------GACCTTGAAAAA-----------------------AGCATTTAACCTCCCACAGATCTGGAAACTTCAATTCACTCTCTGTGT--------------TAGTAAAAA-------------CAAAGACAC-------------GAAAGAAGGAAAATATAAATGTA--AAAGAGAAAACCAAGTGAAAAATCTGTCCTGCAAAA-------AGAGAGTTCCAATACCTGTGTGAATTGCCCAGTTTCTAAATAAGGGAGCATCTTTTTCAACATCCCACCCATGTCTTGCAGCATGCATCCAGGGAATCTGAAAAATCTTCTTCTCCTGGAAGGGAAAACAAACAGGAA ...:.......:..:..x..:.x...x....:x........:.....x..............:..............:.....:.....x........x..........::..:.....:..:..:.x...:..:...........:..x..:..:................::..:.::........xx..::.:.x.:..-.....x.x.x:x..---------......x.x.....x.-------------..:.x....xx...-----...:.----------------------...:..x.x...--:...:::..x::...-----x.:.:.x:::-.:.x.:.:..x.----........-----:.....x.x:..:.------------.....::.:...x:.---.......:.x.:.x..xx::...x--.x..x...:x::.x..x:x..x.xxx:..x..x..xx.:x...x...x.-------------------...xx...xx..x.--------...::.x.....::x..:::....--:..x..:......----------------......:::-....x:.:..xx...:x:.------:.::..:x..:...x....----------------..xx...x...xx..-----.:.x...::x:..:...:x.-----------------------------------...x......x.x:::x::.:....-.x..:.----------...x...::..-------..xx.....::.-----------------------......-----------.xx....::::..x..:..:::x.:.::...--------------...x:.x..-------------..:..x..:-------------x..:xx...xx.x.x..x:....--...:.x.....:...::.:.:xx.:x....x:.x..-------..:.....::.:.......:..:.................x.:x..x...........x.................x..x..............:.................:.....:..:::....x...x.::.. 202M1D14M9I16M13D14M5D5M22D12M2I15M5I10M1I12M4I8M5D14M12I15M3I24M2D49M19I14M8I24M2D13M16D9M1I19M6D19M16D15M5D20M35D25M1D6M10D11M7D12M23D6M11I31M14D9M13D9M13D23M2D36M7D138M 595/849 70.1% 924/94230402 0.0% 293/849 34.5% 131136911 59077644 +6451 chr4 + 190214555 184428938 184428937 184429080 143 AGGACCTCTCTCACACATACACCCA----------CCCTGACCCACTC---ACCTTGTTAAGCCACTTGAGCCCCGGGATCGTGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATGCGCATCCTTTCCACCGGCATGG-----TGCCCTTGAGGGAG chr4 - 94230402 53288469 53288468 53288629 40941774 40941773 40941934 161 AGGACCTCATTCACACACACGTGCAGGCGTGCTTGCACAAACACACCCCTTACCTTATTTATCCATTTCAGCCCTGGTATTGTGTTAGAATTTATTTGTTCTTCCAGCCATGGGCGCATCCGCATTCTTTCGACAGGCATTGTTACCTGCGCTGGAAGGAG ........x:.......:..::x..----------.x.x:..x...:.---.....:..x.x...:..x.....:..x..:.....:..:.....:..:..:........:........x.....:.....x..x.....x.-----...x..x..:.... 25M10I13M3I91M5I14M 110/143 76.9% 161/94230402 0.0% 18/143 12.6% 131140469 59074086 +3224 chr4 + 190214555 184452770 184452769 184452854 85 CAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAGAAAGAAAGAAGAAATAGAGAGAGAAGAAAAAAGCAAATAAACATGTAAAATA chr4 - 94230402 24662129 24662128 24662213 69568190 69568189 69568274 85 CAAAAAAAAAAAAAAAAAAGATTGAAGTGAGGAAAAGAGACAGAGGAGAGACAAAGGAGGAAATAACTGAGCAGCAAGGAAAGTA ...................:.xx:...x..:::.....:.x.::::.x...x.:..:..:...x.:.x:.xx.:..x.x...:.. 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 159790641 30423914 +3089 chr4 + 190214555 184457821 184457820 184457866 46 AAAATGTTCCAAATCCTCAAAAACCTTCCAAAAAAAAAAGAAAAAA chr4 - 94230402 11039825 11039824 11039870 83190533 83190532 83190578 46 AAAGTATTCCAAAACTACAAAAGTCTTCCAAAAAAAAAAAAAAAAA ...:.:.......x.:x.....::...............:...... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 173417996 16796559 +3746 chr4 + 190214555 184460621 184460620 184460718 98 ACACACACACACGCATGCACGCACACACACACACACATGCACG----CGCACACACACACACATGCACGCACACACACACATGCACACGCACACACACACAC chr4 - 94230402 89016098 89016097 89016199 5214204 5214203 5214305 102 ATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCAC .::..........:x...:.:......::..x.::...:....----:.::::::..x....x...:.:.....:x.::.:...x..:.x:.....x::... 43M4I55M 63/98 64.3% 102/94230402 0.0% 4/98 4.1% 95444523 NA +3200 chr4 + 190214555 184460649 184460648 184460712 64 ACACACACATGCACGCGCACACACACACACATGCACGCACA--CACACACATGCACACGCACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .....x.:...:x:...::::.....::::...:.:::...--...............:....... 41M2I23M 46/64 71.9% 66/94230402 0.0% 2/64 3.1% 169495830 20718725 +3119 chr4 + 190214555 184470673 184470672 184470724 52 GAGCAAGACTCTGCCTCAAAAAAAAAAAAAAAGAAAAGAAAAAAAAGGTGGT chr4 - 94230402 41477419 41477418 41477470 52752933 52752932 52752984 52 GACTAATATTCTGTATTAAAAAAAAAAAAAAAGAAAAGGGAAAAAAGGCTGT ..x:..x.:....:x.:.....................::........:x.. 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 142993254 47221301 +3714 chr4 + 190214555 184474066 184474065 184474165 100 TTAAACCTCCACCAACCTCCTCCTCCTCCTCCCTCTCTACCTCCTCCTCCTCCTCCTCCTCGCAGCCTCAGCAGC--CCCAGTAGCAGCAGCAA----CAGCAGCA chr4 - 94230402 82998376 82998375 82998480 11231923 11231922 11232027 105 TCAAGCTCCCCCCATCCTTCGCCCCGGCCTCA-TCCCTGCTGCCTCCTCCTCCTCCTCCTCACCGCCAACGCAGCCTCCCAGTCGCAGGTTCAAAGTTCAGCAGCA .:..:.::..x...x...:.x..:.xx....x-..:..:.:x...................:.x...xxx.....--......x....xxx...----........ 32M1D42M2I17M4I8M 74/99 74.7% 105/94230402 0.0% 7/99 7.1% 101475690 88738865 +11157 chr4 + 190214555 184474375 184474374 184474609 235 TTACCTCTC-AGTGTGCTTTTTTCACGCTACCAATACAATTCCGCAAGGT-ATAAGTGTTGCTAGGGTATGTGAAATGGAAATGAAAGCCCGTCAGTTGAATAATCGCAGGAGCAAAACTAAAAGTTACTCCC--CGGCTTGCCTGAGAACAGTCCAGATCGAAAGCAAAACAAGGAGAGGAAACTGCGAAGAGCC-GCGGCTGGAAATCCCCCCACCCCCCGCC--CTCCTCCGGCCGCGC chr4 - 94230402 53305893 53305892 53306129 40924274 40924273 40924510 237 TTACCTTTCCGGCGCG---TCTTCGCGGCACTTATATAATTCCTCAAGGTTACCGCCGTTGCCAGGGGACGCGAAATGGAAATGAAAACAGGC--GCTGAATAATCGCGGGAGCAAAACTAAAAGTTACTCCCTCCGCCTCGGCTGCGAAAGGTCCAGATCGAAAGCAAAACAAGGAGAGGAAGCGGCGAGCCGCCGGCGCTTGGAAATccccccgcctcccgccgggccgggcggccgcgc ......:..-:.:.:.---.:...:..x:..:x...:......x......-.:x:x:.....:....x.:.:...............:.xx.:--.:...........:........................--..x..:.x...x...x:...............................:.x....:xx...-...x:.............:..:......--x:.xxx......... 9M1I6M3D31M1I42M2D38M2I61M1I28M2I15M 183/230 79.6% 237/94230402 0.0% 12/230 5.2% 131168482 59046073 +3250 chr4 + 190214555 184494845 184494844 184494903 59 CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACACCATCTGAAATGAAAATTTCACTT chr4 - 94230402 59582178 59582177 59582236 34648167 34648166 34648225 59 CTCAAAAAAAAAAAAAAGAAAAATTAAAAAGATCAACATATAAAGTGAAAATATAATTT .................:.....xx......xx..x...x.:..:.......x.x.:.. 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 124912667 65301888 +3354 chr4 + 190214555 184498279 184498278 184498327 49 GGTTTGTGGGGTTTTTGTTGTTGTTGTTGTTGTTTGATTTTTTTTTTTT chr4 - 94230402 28153538 28153537 28153586 66076817 66076816 66076865 49 GATATGTAGGGTTTTTTTTGTTGTTGTTGTTGTTTGTTTTTTTTCTGTT .:.x...:........x...................x.......:.x.. 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 156344741 33869814 +3000 chr4 + 190214555 184498280 184498279 184498332 53 GTTTGTGGGGTTTTTGTTGTTGTTGTTGTTGTTTGATTTTTTTTTTTTTTGAG chr4 - 94230402 70541024 70541023 70541076 23689327 23689326 23689379 53 GTTTGTTGGTTGTTTTTTGTTGTTGTTGTTGTTTCTTTTTTTCTTATCTAGAG ......x..x.x...x..................xx......:..x.:.x... 53M 43/53 81.1% 53/94230402 0.0% 0/53 0.0% 113957256 76257299 +3071 chr4 + 190214555 184498284 184498283 184498330 47 GTGGGGTTTTTGTTGTTGTTGTTGTTGTTTGATTTTTTTTTTTTTTG chr4 - 94230402 89666547 89666546 89666593 4563810 4563809 4563856 47 GTTGATTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTG ..x.:x.....x............:......xx.............. 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 94831737 NA +3386 chr4 + 190214555 184527278 184527277 184527371 94 ATTTAATTTTCTAGCAATCTTAAGTGGTAGATA-CTGTTATCATCTCAATTTTGCAGGTGAGGAAACAGAGGCAAAAGCAGTGAAAGCAACTTGC chr4 - 94230402 10729160 10729159 10729254 83501149 83501148 83501243 95 ATTTAGCCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGC .....:::.:x:.::.x:.:.:x.x.....:..-:.::.....x...x.....:......:.:....x......x.x:...xxx...:..:.... 33M1I61M 62/94 66.0% 95/94230402 0.0% 1/94 1.1% 173798118 16416437 +3042 chr4 + 190214555 184555423 184555422 184555476 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGATGAGTCTGAATACACTAATT chr4 - 94230402 54585559 54585558 54585612 39644791 39644790 39644844 54 AAAAGAAAAAAAGAAGAAGAAAAAAAAAAGTACATGCTTCTTAAAATGTTAATT ....:.......:..:..:.............x...xx...x..x.:::..... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 129969864 60244691 +10546 chr4 + 190214555 184629267 184629266 184629513 247 TTTCTTTAGTGATAAAAATAGAGTTCTTTTGTGAGCATGGAAACAATACATGGAATCTGTTTCTTTGCATGAAAAGTAGCGTCAAA-GGAAAAGGACTCAAATTCTGTTGCCACCTTTCGGTTAACCCGGGTAAGAATGTGCATAAATTCAAGCTTGTCGGCATACTGTTTCAGCATGGCACAAAGCGACTGGATGAACCAGGAGCCATCCTTTGAATTTCGCCAAGAATAATAACC--TAAAAGGCAAA chr4 - 94230402 53318479 53318478 53318724 40911679 40911678 40911924 246 TCTATTTAGCAAGGAAAGTAGAATTCTTTGGTAAGCATAGACACAATGCATGGAATCTGTTTCTTTGCATTGAAA-TCCTGTCGAGTGGAGCAGGATTCATATTC---TGCCACTCTGCGATTTACACGAGTTAAAATCTGCATGAGTTCAAGTTTCCTGGCGTGTTCCTTCAGCATCCTACACAGAGACTGAATAAACCAGGAGCCTTCAGCTGCGTTCCTCCAGGAGTAGTAGCCTGTGGAAGACAAA .:.x.....::.x:...:....:......x..:.....:..x.....:......................x:...-.xx:...:.:-...:x....:...x....---......::.x..:..x..x..:..x.:...x.....:.:......:..x::...:.::.x:........xx:...x..x.....:..:...........x..xx:..x:..:.x...:..:..:..:..--.::...:.... 75M1D10M1I18M3D129M2I11M 176/243 72.4% 246/94230402 0.0% 7/243 2.9% 131310788 58903767 +7047 chr4 + 190214555 184631018 184631017 184631171 154 TTATGTGTAACGTTCTCACCAGGTGCTGTGGAGTATGCATACAAGAAGTCGGCCTCCACTGGTATTTTATGACACGCCATGTCATCATCAACACCACTGTCTGTCTCAATGCCACAGTCCAGTTCTGTACCACGGCAGGCCTGGGTGTTAGAAA chr4 - 94230402 53319368 53319367 53319518 40910885 40910884 40911035 151 TTCTTTGCAAGTTTCTCACCTGGAGCAGTAGAATATGCATACAGGAAGTCTGCTTCTACAGGTATTTTTTGACACACTGTT---TCATCTGGTCCACTGTCTGCTTCAATACCAGAATCTAATTCTGTTCCTCTACAGGCCTATTTGTTGAAAA ..x.x..:..xx........x..x..x..:..:..........:......x..:..:..x........x......:.::.x---.....x:xx..........::.....:...x.:..:.:......x..x.x:.......:xx....::... 81M3D70M 111/151 73.5% 151/94230402 0.0% 3/151 2.0% 131311650 58902905 +11193 chr4 + 190214555 184631750 184631749 184632018 269 TCAGTTAGACATTACCTGAATAATGAAAAGTTTGGGTTTTCCAGTTAGACTTCTACAACGATCCCCTCTGAAAAAGTTTGTTATTTTTTTCAGGTCAACAGGTCCATTTGTTCCAAAAATTATTCCTTCTTCACCATGGCTCAGAAGCACACAAACAAAACTGCTCCTTTTGCTGTGATCTTCTTTAGAAACTGTAAAGACATTTGCAAATAAAAGGAAAAAAAATCCATGACTTTATTCAACAA----CTTCAGATATACTGTATGGGAACA chr4 - 94230402 53319937 53319936 53320193 40910210 40910209 40910466 257 TCAATTGTACCTCACCTGAATGAAAAAGAGTTTGGGTTTCCCCGCTAGACTTCTGCACTTGTCACCTCTGAAAAGGCTGGTTAGTACTTTCAGTTCAAGAGGGCCATCTGTACCATAGAAGAGTCCTTCATCGCCATGGCTTAGCAACACACAAACAAAACTGCTTCGCTTGCTGTGATCTTCTTCAGAAACTTGGAAGA----------------GAAAAGAATTAACTTATTGCACTCCCCAAGAAGCTCCGGACATTGTGTATTGTGACA ...:..:x..x.:........:.x:..:...........:..x.:.........:..x:x:..x..........:.:.x....x.x:......x....x...x....:...x...x.:.xx.x......x..:........:..x.:..................:.x:................:.......xx:....----------------.....:..x.xxx.x.:.x:.:..xx...----..:.:..:..xx.....x.x:... 200M16D29M4I24M 187/253 73.9% 257/94230402 0.0% 20/253 7.9% 131311813 58902742 +5395 chr4 + 190214555 184632263 184632262 184632412 150 CTTACCATCACGCATCAATTCCACAATTTCTTCACGTGTAAGATCATTTTTATTCCTGACTTCATATTTCAAGTTTCTGAATGTTTCCCTGAGGTTTGCTGCATCGACATCTGTACCAGACCGAGATGTCATTCCTTGGAACAGAAAGAA chr4 - 94230402 53322198 53322197 53322347 40908056 40908055 40908205 150 CTTACCATTTTTCAATAGCTTAAAAATATCTCTGCTTGACAGATCATTGTTAAGCTTGACTTTATATCCCAGCTTCATAAAAACTTCTCTGACACTTGCAGCATCTGCATCCGTGCCTGAACGAGATGACAGTCCTAGACATAAAAGAAA ........:x:x..x:.::.:x.x...x...:::.x..xx........x...xx.:......:....::..:x..:x.:..x::...:....x::....x.....x:....:..:..x..x.......x..x....x.:x.:.:..::.. 150M 97/150 64.7% 150/94230402 0.0% 0/150 0.0% 131310065 58904490 +7128 chr4 + 190214555 184635213 184635212 184635437 225 AATAATAC-TGCTTTTAATATTATATCAAATGTAAATGGCACAAACATTTGAAAAGGATTAAAAATTATGTAAGACACATACCAGTGCTTTTATGAAAATTCTTATTATTAATTATTATACATAAACCCATCTCAGGATAATCCATTTTATAACTGTTGTCCAGGGATATTCCAGAGTCCATTGATTCGCTTCCATGTATGATCTTTCTGTTTAGAAATCAAATAA chr4 - 94230402 53322745 53322744 53322951 40907452 40907451 40907658 207 AATAATACATGCTTCAAAT-TTATCTGAAATACAGA--------------AAAATAAAGTAATAATTG---AAAGCA-GTACCGGTATCTCGGTGGAAGTTCTTATTGTTTATTATAACACATACTCCTATCTCTGGATAATCCATTCTGTAACTGTCATCAGGCAGAATTCCAGAGTCCACAGACTTGCTAGCAGGTAAGTTCATTCTGTACACAAATCAGACAA ........-.....:x...-....x.x....::.:.--------------:...x::.x...x....:---..::..-:....:..:::.:x:..:..:........:..x.....x.:.....xx..:.....x............:.:.......::..x:.x::x.............:x..:.:...xx..x...x.x..x......x:.x......:.:.. 8M1I10M1D16M14D18M3D6M1D148M 147/206 71.4% 207/94230402 0.0% 20/206 9.7% 131312468 58902087 +3087 chr4 + 190214555 184638877 184638876 184638980 104 AACACAATTCTACAATGCTTAGATTCCCAAGATACAGTATCAAGATGTTCCAAATCTCCATTAATCTTTATTCTTTTTTTTTTTTTCTTTTGAGGCAGGGTCTC chr4 - 94230402 43957613 43957612 43957710 50272693 50272692 50272790 98 AATACAATATTTCAGCATTTG---TTTCAAGCCACATAATAAAAGC---TCAAACTGAAACTAGTCTTTATCCTTTTTTTTTTTTTTTTTTGAGCCAATGCCTC ..:.....x:.x..::::..:---.::....x:...xx..x..:::---:....::xxx.:..:.......:..............:.......x..:x.:... 21M3D22M3D55M 65/98 66.3% 98/94230402 0.0% 6/98 6.1% 140681264 49533291 +3855 chr4 + 190214555 184652854 184652853 184653000 147 AAAAGAAAAGGAGGGAGGAAGGAAGGAAAGAAGGGAAAGAAGGGAGGGAGG----GAGGAAGGAGGGAAGGGAGAAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAAGAAGAGGGAGGGAGGAAGGAAGGAAGGAAGAA chr4 - 94230402 44053989 44053988 44054135 50176268 50176267 50176414 147 AAGAATGGAGGAGAAAGAAAAGAAGGAGACAAGAAAATG--GGGAGGTGGGTCTTGAAGAAAGAAAGAAGACAAAAATGAATACA--AAGAACAGAAAGAACAATGCAAAAGTGGGCGGATAAAGGAAGAAAGGAGAGCAGTGAGACAGAA ..:.:x::.....::..:..:......:.x...::..x.--......x:..----..:...:..::....:x.:...x...x:x.--.....x:...:...x:.x.x...::x...x:::x.:...:..::....::.x..x:..:x.... 39M2D10M4I30M2D64M 90/143 62.9% 147/94230402 0.0% 8/143 5.6% 140598865 49615690 +3250 chr4 + 190214555 184653003 184653002 184653149 147 GAAGGAAGGAAGGAAAGAAGGGAAAGAAGAGGGAGGGA-GGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGGAAAGAAGGGAAGGAAGGAGGGAAAGAAGAAGGAAGGAAGGAAGGTAGGTAGG--------TGAGAAAGAAAGAAACTGAGAGA chr4 - 94230402 30232146 30232145 30232295 63998108 63998107 63998257 150 GAAGGTAGAATGAGGTTAAAGGGTAAAAGGGTGAAAGATGGAAAGGAATTAAGGAGAAGGATAGCAAGGAAGGAGGGATATGAAGAGGAAAGGAAAAGTTCAAGGCAATCA------TAGGTAGTATGTTTACTGTGAATGAGATGAACTGAAGGA .....x..:.x.:::xx..:..:x.:...:.x..::..-....:.:.:xx.:.:......:x..x.........::..x:x....:::::...:....xxx....x.:xx.------.......x--------..x...x..:.x:......::.. 38M1I72M6D8M8I23M 89/141 63.1% 150/94230402 0.0% 15/141 10.6% 154420857 35793698 +9674 chr4 + 190214555 184657018 184657017 184657324 307 TTATCAAACAAAATATATTCTAAACAAAGAAA----TTAATGGCCTTTTTGTTTGTTGTTTGTTTTAGTAGTAATTGATAGAAATATTACGTGGGATAGGATTTATTCTCTCCACACTTCTGAACCAATGAATAGAAAATGGGAAGCAAAACTGAAGCAAATTGAAGAACGAGCATCTCATTATGAGAGGAAACCGTTGTCCTCAGTGTATAGACCAAGATTGTCCAAGCCAGAAGAACCACCCTCCATCTGGAGACTATTTCATCGACAAGCTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAAGTAA chr4 - 94230402 53334252 53334251 53334552 40895851 40895850 40896151 301 TCATTAAATAAATTATGCTC--AACAAGAAAAGGTTTCAAAAGCAATGATGAGTATTGAAGAAGTTAGAAGTGAATCACAAGAAT-------TGATTGTGATCTATT-TGTAATTGCTTTAGGACAAATGAAGAGAAAATGGGAAGAAAGAGTGAAGAAAGTTGAAGAACTAGCGTCTTACTATGAAAGAAACCCTCTTCCTACAGTTTACAAACCAAGACTGTCCAAACCCTTACAGCCATCCCGTGTCTGGAAAATATTCTGTCGACAGGCTGATGCTTTCAGATTTGTGAAAACCTGCAAGGAGGTAA .:..:...:...x...::..--.....::...----.:..x:..xx.xx..xx.:...xxx:xx....x...:.x.x.:.::...-------x.:x.:x...:....-.x.xxx::...:x.:..x......x.............x..:.x.....x..:.........x...:...:.:.....:..:..x..x:.x:.:x....x..:.:.......:.......:..xxx.x.:...:..:x::......:.x....:::......:...x.x.....:.:x.....x....x...:..:..:.... 20M2D10M4I49M7D15M1D203M 200/297 67.3% 301/94230402 0.0% 14/297 4.7% 131322766 58891789 +4623 chr4 + 190214555 184659317 184659316 184659430 114 AATTCTTTTTTGATTTTATGCAGGACGTTCATGTATTTGCTTTGGAATGCAAAGTAGGAGATGGACAACGTATTTACCTTGTGACAACCTATGCTGAATTTTGGTTTTACTATA chr4 - 94230402 53335824 53335823 53335936 40894467 40894466 40894579 113 aaatCTGTTTTTCTTGTA-AAAGGATGTTCATGTATTTGCCTTGGAAAGGAACACACAAAATGGACAGAGGTTTTACCTTGTGACTACATATCAAGAGCTTTGGTATTATTACA ..x...x....xx..x..-:x....:..............:......x.x..x::.x:.:.......:x.xx.............x..x...xxx..::......x...:..:. 18M1D95M 82/113 72.6% 113/94230402 0.0% 1/113 0.9% 131323493 58891062 +7726 chr4 + 190214555 184661771 184661770 184661908 138 TAGAAAAAATCTCTTACACTGCTATGAAGTTATTCCTGAAAATGCTGTGTGCAAGCTTTATTTTGATTTGGAATTTAACAAACCTGCCAACCCAGGAGCTGATGGGAAAAAGATGGTTGCATTACTCATTGAGGTAAA chr4 - 94230402 53336676 53336675 53336813 40893590 40893589 40893727 138 TAAAACAAGTCTTATGCATTGCTATGAAGTAATTCCTGAAAAAGATGCTTGCAAACTTTATTTTGATTTGGAGTTCTACAAAGCAGCAAATCCTGGTGCTGATGGCAAGGATATGGTTGCAAAGCTAATTGAGGTAAA ..:..x..:...:x.:..:...........x...........x.x..:x.....:.................:..:x.....x.x..x..:..x..x........x..::.x.........xx:..x........... 138M 108/138 78.3% 138/94230402 0.0% 0/138 0.0% 131325095 58889460 +8233 chr4 + 190214555 184665910 184665909 184666070 161 TTTTTAGTATGTGTGTAAAGCACTTCAAGAGTTATACGGTGTTAATTGCTCAGCTGAAGATGTTTTGAACTTGGATTCTAGCACTGATGAAAAATTCAGCCGGCATTTAATATTTCAGCTCCATGATGTGGCATTTAAAGATAATATTCATGTTGGTAAGT chr4 - 94230402 53338043 53338042 53338203 40892200 40892199 40892360 161 TTTTCAGCTTGTCAGCCAGAAGTTAAAAGAACTGTATGATGTTAACTGCTCAGCCAGAGATGTCTTGAATTTAGATTCCAGTACTGATGAAAAATTTAGTCGGCACTTAATATTCCTACCCTGCAAGACTGTATTTAAGGATAACATTCACGTCGGTAAGT ....:..:x...xx.:x.::x::.xx....::.:..:.:......:........:::......:.....:..:.....:..:..............:..:.....:........:.x:.:.::::.x::x.:......:.....:.....:..:....... 161M 113/161 70.2% 161/94230402 0.0% 0/161 0.0% 131327867 58886688 +3388 chr4 + 190214555 184671832 184671831 184671898 67 TCCTGGGTTCATGCCATTCGCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCACCACCACG chr4 - 94230402 18197140 18197139 18197206 76033197 76033196 76033263 67 TTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG .:.........x.:xx...:.xx:x........::...........:.:....x.:.......:::. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 166474692 23739863 +4985 chr4 + 190214555 184672159 184672158 184672467 309 GCTTTTTTCCTTAGGTAATTTTTTGAGAAAAATTTTGCAGCCTGCTCTTGACTTGCTTGGCAGTGAAGATGATGATAGCGCTCCAGAGACAA---CAGGCCATGGATTTCCCCATTTTTCAGAAGCACCTGCAAGACAAGGATTTTCTTTCAATAAAATGTTCACAG-------AAAAGGCTACAGAGGAAAGCTGGACATCGA-ATTCAAAGAAACTGGAGAGGCTGGGGTCAGCTGAGCAAAGCAGTCCTGACCTTTCATTTCTAGTTGTGAAGAATAACATGGGAGAGAAGCATCTTTTTGTAGATCTCGGTAAGTA chr4 - 94230402 53340132 53340131 53340443 40889960 40889959 40890271 312 GTTTTGTTTATAAGGTAACTTTGTGAGAACCATTTTGCAGCCTGCCATAAGGTTAGTGGGGAGTAACGTCGCTGCTCCCATTGCAGAAGGAGGAGCAGGATATACGT---CCCAGTGTTCTGCACCAACAGTTGAGTTAGATGGTCCTCT---TACAAACCTCACAGCAGTCGAAGATGCTTCCAAAGGCTGGCCAGCCATTGCTGACCAAAGAAA--GGAAACAGAAACATCACACCATGGAGAAAACTCTGAATTTTCTTTTCTAATAGTAAATAACAAAGAAGGAGACAAGCAACTTTTTGTGGATCTAGGTAAGTA .:...x..:x.x......:...x......xx..............:x.x::x..:x.x..x...:.x.x:.x..x.xx.::.x....::x.:---....x:..:x:.---....x.x...x.x.x..x.x.:x::::x..:xxx.:..:.---..x..xx:......-------.:.x.x:.x..:...xx:..::.x...:.x-:x:........--...:.x:xx::x:...xx:x.xx:.::x.:::....x:....x......:.x..:..x..:..x:x:.....x.....x........:.....x........ 92M3I12M3D40M3D14M7I30M1I11M2D102M 183/301 60.8% 312/94230402 0.0% 19/301 6.3% 131332027 58882528 +4314 chr4 + 190214555 184676180 184676179 184676337 158 TCCTGCCGCCTTAAACTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCCCAGTAGCTAGAACTACAAGTGCA----TACG-ACCACACTTTTAATACAAATCAATCTTTCT---------TCCCTCCCCTCCCCTGCCTTCCCCTCCCTTCCCTTTCCTTCCCTTCCCT chr4 - 94230402 18197124 18197123 18197293 76033110 76033109 76033279 170 TTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTGTATCATCCTTTCATGACATTACATACTTTCCCAAACCAGGTCCCTAATCTTTACTGCCTT--CTGCCCTCCTCTTTCAGTCTACTTCCT .:..:.x...:x..:..:.....:.....::x.:.x.xx.x........::.x.......:........x.....----.::.-.:..:x....:.xx...xxx..xx.....:---------.....xx:..::x.......--.:x....:.:.....xx..:x:.:... 75M4I4M1I30M9I20M2D27M 105/156 67.3% 170/94230402 0.0% 16/156 10.3% 166479056 23735499 +3202 chr4 + 190214555 184676350 184676349 184676475 126 TTCCTTCCCTTCTCCTTTCCCTTCCCTTCCCTTCCTTTCCCTTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCTCCC--------TTCCCCCTTCCCTTCTCCCTTCCCTTCCCTCCCTCTCTCTCCTTTCCCT chr4 - 94230402 26928842 26928841 26928975 67301428 67301427 67301561 134 TTCTCCCGCTTCTCGCATCCGCACCTCTGCCCTCGCTTCCTTCACCCGCTCCCTTCCCCCATCCTTTGTTTTTCACCACCTCGGATCTCCCCTTCCCCATCTCGCCCCCCCCCGGCCCATTCCCCCGATTCCCT ...:::.x......x:x...x:x..::.x..:..x:....:.:x..:x.:........::x...:..x::..::x..--------.::.........:x:::.x::...::..xx...x:..:.:.xx...... 77M8I49M 74/126 58.7% 134/94230402 0.0% 8/126 6.3% 157747508 32467047 +3400 chr4 + 190214555 184676351 184676350 184676487 137 TCCTTCCCTTCTC---CTTTCCCTTCCCTTCCCTTC-------CTTTCCCTT---CCCTTC--CCCCTTCCCTTCTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCCCTCCCTCTCTCTCCTTTCCCTTCCTTTCTCCTT chr4 - 94230402 9693684 9693683 9693835 84536568 84536567 84536719 152 TTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT .::..x......:---..:.:...:..xx.......-------.....:...---:x....--.:x..xx::..x::x.x.xx.....:...::...:.......:.::....x.....:x:::.:x:.x.::...:.:....:..::.... 13M3I20M7I9M3I6M2I89M 88/137 64.2% 152/94230402 0.0% 15/137 10.9% 174982667 15231888 +3355 chr4 + 190214555 184676414 184676413 184676516 103 CTTCCCTTCTCCCTTCCCCCTTCCCTTCTCCCTTCCCTTCCCTCCCTCTCTCTCCTTTCCCTTCCTTTCTCCTTCC-CTTCCCCTTCCTTTTCTTATCCTTCCC chr4 - 94230402 20485614 20485613 20485715 73744688 73744687 73744789 102 CTTGCTTTCCACCCCTGCCCCACCCCCCCCCTTTTCC--CCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTTAGCTTATGCTTTAATTTCATATTTATTCC ...x.:...:x..:::x...:x...::.:..:..:..--..:.::....:..:..........:....:.....:x-...x:x...:xx....x...::x.:.. 37M2D37M1I27M 66/101 65.3% 102/94230402 0.0% 3/101 3.0% 164190800 26023755 +3896 chr4 + 190214555 184676524 184676523 184676718 195 TTCCCCATCCCTTCCCTTTCCCTTCCCTTCCCCTTTCCTTTTCTCTCCCTTCCT---TCTCCCTTCCTTCCCCTTCCTTCTTTTTCCCTTCCTTTCTCCCCTTCCTTCCCCTCCCCTTCCCCCTCCCTTCTCCTTCCCTTCCCCTTCCTTCCCCCTTTCTTTCCTTTCCCGTCCCCCCCCTTCCCTTTCTCCTTCCCT chr4 - 94230402 91731747 91731746 91731940 2498463 2498462 2498656 194 TTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTT---TCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTTATCTCAGCGTTTATTACTCCCCGTCTCCTGCGCTTGCTGCCATCACCACTCCCCATTGTTCCCTTCTCCATCTCTTAATACATCCATCCCCG-CACCCGCCTCACCCCCCTCACTCACT ...:.xx.:.:...:x:..:x...:........:......---........:xx---....::::x:...:...:....x.:.:xx.x..:x..x......x..::::x.x:::x..x..x:.x..x:..:..x.:x:.:..:::...x..:.::xx.x:x...x.:....-.x...x...:x..:::...x:..x.. 40M3D11M3I114M1D26M 112/191 58.6% 194/94230402 0.0% 7/191 3.7% 92944777 NA +3200 chr4 + 190214555 184676757 184676756 184676838 82 TTCCCTTCCCTTTCTTTCTCCCTTCCCTTCCCCCTTCCCTTCCCTTCCCCCTTCCCTTCCCTTTTCCCTTCCCTTCCCCCTT chr4 - 94230402 93244894 93244893 93244975 985428 985427 985509 82 TTCCCGTTCTTCCCTTTGTCTCTTCCTTCCCCCATCCCCTGCTCTCCAGCCTTTCCCTTATCTGTTGTTCCACTTCCTCCCT .....x.:.:.::....x..:.....:.:....x.:....x.:..:.xx....:..:.:x::.x.:x:.:.x.....:..:. 82M 52/82 63.4% 82/94230402 0.0% 0/82 0.0% 91431863 NA +3615 chr4 + 190214555 184676826 184676825 184676969 144 TCCCTTCCCCCTTTCCTACCCCATTCTTTTCCCTTCCCTTCCCTTCCCCCTTCCCTTCTCCTCCCCCTTCCCCTCTCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCC---TTCCCCCTTCCCCCTTCCC chr4 - 94230402 93339619 93339618 93339759 890644 890643 890784 141 TCCCTGCAGCCCGGCTCCCCCCAT------CCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCC .....x.xx..:xx.::x......------..x:..:.:...x.:x..:..xx::.:::...x.x.::..:::....:x:..x....::.....:x..:....:.....:.:x:.....::::x.---..x....xx......:... 24M6D95M3I19M 84/138 60.9% 141/94230402 0.0% 9/138 6.5% 91337207 NA +3277 chr4 + 190214555 184676866 184676865 184676972 107 CCCTTCCCCCTTCCCTTCTCCTCCCCCTTCCCCTCT--CTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTC chr4 - 94230402 93339628 93339627 93339732 890671 890670 890775 105 CCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCT----CTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTC ...xx.:...::.x:::x::....:..x..x.....--:...:....x.x.:..----.:..:.:..x...x.:.:::......x..:....:.....:.:x:...:.. 36M2I16M4D51M 66/103 64.1% 105/94230402 0.0% 6/103 5.8% 91337238 NA +4018 chr4 + 190214555 184676868 184676867 184676998 131 CTTCCCCCTTCCCTTCTCCTCC---------------CCCTTCCCCTCTCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCCTTCCCCC----TTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTCCCTTCTC chr4 - 94230402 93339633 93339632 93339782 890621 890620 890770 150 CTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCTGGACTTCCC ..:.....x...x:........---------------:..:.x.x.......::.:.:x:..x....::.....:x..:....:.....:..x.:....::.:x.----.x....xx:...:...:.xx:x:.....::..xxx....:. 22M15I68M4I41M 86/131 65.6% 150/94230402 0.0% 19/131 14.5% 91337235 NA +3209 chr4 + 190214555 184676876 184676875 184676991 116 TTCCCTTCTCCTCCCCCTTCCCCTCTCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCCTTCCC------CCTTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTC chr4 - 94230402 79478398 79478397 79478519 14751884 14751883 14752005 122 TCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTC .:..:..:.:x..:.....xx::.:x..:::x.:..:.x:..:...:::.::::xx...:.....::.....x....:x:------::...x.x....:.:x............x::..:.. 80M6I36M 68/116 58.6% 122/94230402 0.0% 6/116 5.2% 105198478 85016077 +3976 chr4 + 190214555 184676885 184676884 184677018 134 CCTCCCCCTTCCCCTCTCTTCC--CCCTTCCCCCTTCCCCCTTC---CCCCTTCCCCCTTCCCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTCCCTTCTCCCTTCCCC--CTTCCCTTCCCT chr4 - 94230402 93339633 93339632 93339773 890630 890629 890770 141 CTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTTGCT .::.....x...x.....:...--.x.:..:xx:...:....x.---.:.:..:.:..x...x.....:.....:x..:....:.....::.x.:.::..:.:x:xx::.x...:xx:...:.....--.x......:x.. 22M2I20M3I80M2I12M 87/134 64.9% 141/94230402 0.0% 7/134 5.2% 91337252 NA +4024 chr4 + 190214555 184676909 184676908 184677056 148 CTTCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTC--CCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCC----TCCCCTT chr4 - 94230402 93339618 93339617 93339770 890633 890632 890785 153 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCT-TTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCTGCAGGTTACCCCAACCCCCTCCCCAGCATCCCTTT ..:..:x.xx...xx:......:x:..x..::..:::x..x.:..:xx:...:....x.x..::..-....:..x.:......--......x..:....:.....::.x..::...:..x.xxx:.x...:xx..::......----....:.. 66M1D16M2I58M4I7M 94/147 63.9% 153/94230402 0.0% 7/147 4.8% 91337291 NA +3039 chr4 + 190214555 184676941 184676940 184677005 65 CCCTTCTCCCTTCCCCCTTCCCCCTTCCCTTCCTCTTTCCCCCTTCACTTCCCTTCTCCCTTCCC chr4 - 94230402 90116989 90116988 90117053 4113350 4113349 4113414 65 CCCTGCTCTCTCTCTCTTTCTTCACCCCCCTCCTTTCCCCCCCTTTACTTCTCCTTTCAGATCCC ....x...:..::.:.:...::.x::...:....:.::.......:.....:.:.:..xxx.... 65M 43/65 66.2% 65/94230402 0.0% 0/65 0.0% 94559952 NA +3575 chr4 + 190214555 184676947 184676946 184677061 115 TCCCTTCCCCCTTCCCCCTTCCCTTCCTCTTTCCCC------CTTCACTTCC----------------CTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCTTCCCCCTTCCCTTCCCTTCTCCCCTCCCCTTCCCCT chr4 - 94230402 9693699 9693698 9693835 84536568 84536567 84536704 137 TCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTCCTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCTT ..:.....:..:xx:......:x..:x......:.:------.....x:.x.----------------.....:...::...:.......:::.::..x.....:x:..::x..x::..:.:.::....:.....:. 36M6I10M16I69M 75/115 65.2% 137/94230402 0.0% 22/115 19.1% 174983248 15231307 +7723 chr4 + 190214555 184678221 184678220 184678397 177 TTTTGATGTAGGAGTTTATACAAGAAATAGAAACTTTCGGCTATATAAATCATCAAAAATTGGAAAGCGTGTGGCTTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGTCAAAAGA-TGTTTCTGACGAATATCAATATTTTCTCTCTTCTTTGGTCAGCAATGTCAGGTA chr4 - 94230402 53341868 53341867 53342044 40888359 40888358 40888535 177 TTTTCCTGTAGGAGTTTACACAAGGAACAGAAATTTCCGGATGTATAAGTCATCAAAAGCAGGAAAAAACGTGATCCTGACAATAGCAGAGGATAATAAGTTTGTCCCCA-ACTGTGAAGAGAACGTTTCTTTGGAAGAAGCGTATTTTCTTTCCTCTTTGGTCTGCAATGTTAGGTA ....xx............:.....:..:.....:..:...x.:.....:.........::x.....:x::...::::..:x::.x:.x..:.....:..:...x.:..:.-..x..x..:...-:......xxx...x.xxx:........:..:.........x.......:..... 110M1D12M1I54M 126/176 71.6% 177/94230402 0.0% 2/176 1.1% 131336353 58878202 +3250 chr4 + 190214555 184681650 184681649 184681732 83 CTGCAACCTCTGCCTCCTGGGTTCAAGCAGTTCTTCTGCCTCAGCCTCCCATGTAGCTGGAATTACAGGCGTTTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:...........::x...x:xx.x........::..x..........:....--...x::....::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 166484524 23730031 +10694 chr4 + 190214555 184685399 184685398 184685690 292 TCTGTTGCAGTAGAAACCATTGAAGGTTTTCAGTGTTCTCCCTATCCTGAAGTTGATCATTTTGTTCTTTCTTTGGTGAATAAAGATGGCATTAAAGGAGGTAAAGTTAATCTCATCCTTTGTTAACTGTTATATGATAGAGTGATAGTAGCTTTAGAAACATTATTTGCATTTT-AGGAATTCGGCGTTGGAACTACTTTTTCCCAGAAGAATTACTGGTTTATGATATTTGTAAATATCGGTGGTGTGAAAACATTGGAAGAGCCCATAAGAGTAATAATATAATGTAAGT chr4 - 94230402 53343747 53343746 53344034 40886369 40886368 40886656 288 TTTGTTTAAACAGAGCCCATGGAAGGCTATCAGGAGTCACCGTATCCAGAGATTGATTGTTTTGTTCGTTCTTTGATTAATAAAGACGGAGTGCAAGGAGGTAAC----AACTGTGCCATTATTTACAGATGAATACTC-AGCAACAGTATTTATAAACAAGTAATTTTCTTTTTCAGGGATAAGGCAATGGAATTATTTCTCAGGGGAAGAAATACTTGTTTATGACATTTCTGGTTACCGTTGGTGTGAAAATATTGGAAGAGCCCACAGAAGTAACAACATCATGTATGT .:....xx.::...:x....x.....:.x....x:x..x..x.....x..::.....::........x.......:.x........:..x:.xx..........x----.x..xxx..x..:..x..x.x.:x..:x.x-..::.:....x:.x..:.x.x:.x....x.x....-...:..xx...:x.....:..:..:.:xxx:......x....x........:....x.::x..:..x...........:..............:.::.....:..:..x.....x.. 105M4D30M1D35M1I117M 201/287 70.0% 288/94230402 0.0% 6/287 2.1% 131341652 58872903 +3335 chr4 + 190214555 184687146 184687145 184687228 83 CTGCAACCTCCGCTTCCTTGATTCAAGTGATTCTCCTGCCTTAGCCTCTCAAGTAGCTGGGATTACAAGTGTGTACTACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x:.:..x.:........x...x.xx.x..:.....:............:.:....--:...:..:..::.. 67M2D14M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 166490020 23724535 +5552 chr4 + 190214555 184697612 184697611 184697813 202 TTCTGAAGCATGGTAAAAAGTAAAATTGGAGTTACCGTTTCCTTTACGTTTGGTTCTTGAGCTTGAACATCTGAATAATCTTGATAAAGCTGTTTTAAATTAGATAAGAAATATGCTGCATTCCTAAGGGAAGACTTTCTCTCTTTAAGTTCATCATATTTTGTTTGTAGTTGTTTCAGCTGTGGCTCTAACCTAAAACAAA chr4 - 94230402 53346600 53346599 53346795 40883608 40883607 40883803 196 TTCAAAAACATGCAGAAATATATACTCA---CTACCACTTTCTTT---CTTGGGTTTTCTTCTCTGTAATCCAAGTAGTCTTGCTGTAGTTCCTTTAAATCAGTAAGGAATTGAACTACTTGCCTCAAGGAAAATTTCCTCTCCTCCACCTCAGCATATTCTTTTTGTAGTTTTATCAGTTGTGGTTCAGTTCTGAAAAAGA ...x:..:....xx:...x:..x.x.::---:....::..:....---:....x.:..xxx..:x:xx...::.:..:.....x.:x..:.x:.......:..xx.:...x.:x:..:.x.x...x.:....:.:..:.....:.:x.x:...x......:.x.........x.x....:.....:..x:x:..:...x.:. 28M3D14M3D154M 124/196 63.3% 196/94230402 0.0% 6/196 3.1% 131351012 58863543 +3584 chr4 + 190214555 184698526 184698525 184698597 72 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::..........x...x.xx.x........:..:.........:.:....x.... 72M 52/72 72.2% 72/94230402 0.0% 0/72 0.0% 166501400 23713155 +3473 chr4 + 190214555 184754878 184754877 184754947 70 AACTCCTGGGCTCAAGGGATCCTCCTGCCTCAGCCTCCCATGTAGCTGGGACTACAGGTGCACGCCACTG chr4 - 94230402 18197137 18197136 18197204 76033199 76033198 76033266 68 AGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA--CCACTG .:..:.....:.....x.x.:.x.xx.x........::..x........:......x.....--...... 62M2D6M 53/68 77.9% 68/94230402 0.0% 2/68 2.9% 166557741 23656814 +26104 chr4 + 190214555 184755580 184755579 184757922 2343 AAAAAGATGCCTCACTCACCTGAAATGCAGAAATATTTATTTTGGTTTCCTTCATTGTTTTTGGAAATTTTGTTTTGGTTT-ATAAAACATAGAAATAGCCAACACTTAAAGCAAACATTCAAAACCCCAAGGTGACAAATTA------------TTGACTT---TTTGTGCAATTAA---GAATACATATATGAAGTTAGGCTACCAAGTAGTGTTATTACAATGACA-ATTCTTTAGTGCAAGCCCTGTTGTGCTTGTATATAATACATGTAC----TCTCACAGACCCCAAAACAGCTGCTTTAAATGTACAAATGACAGCTCAATTCAGTCAAATGTGGCAAA-GACTCACA-----ATAAAGTGAACTGCTGTTAATTTCCCAAATTAACTTTAAAAAATCC----------CTGGAGAAGTGA-----ATCCCAGGAAATGAACTTTCCAGATTTCTACATCCTAGAATTTTGGCTTGTC-AAACACATTTCAT-------AGAAATCAGGTAGCATTATAAGAACATTT------GCTTATTACTGTCCATTTCAATAAG--TACTCAA--GTATATACTCCCTTAATAGCTTTAAAGAAATGCTTGCCTGAGAGTTTATTTT--TTGGGGAAAAAGGCAAGTTAATCCCAACATGATCTTTTGATATGAAAACCACATTAAAAATCTGTTGGCCTT-TACACAGAGTGAGTGGTTCAGTGAAGATAAAGTAGACAGTTATTCAGGCGTCACAGCTGAGCATGGCTGATCCAGGTAACTCTTTCTTGAAATGCTTGTCTTCACTATAGAATCTAAGGCAGATTTTTAAATAA---------CCCCTGAAAAAGGATGGAGTCGGGGAA--TCAGGCCTGGAGAACCGAGTCCAAGAGCATTCTGCCATGAAAGAGAATCCA----CGCGTTCTGA-TGAGCACCCATTTGCCAGAGGCTCCTTATCTGCATGGTTCTGAGTTGGATCT-----------GCCCTCCCGCTTACTG----------------GAAACCTTA----TGCTCCAACAGAAACCACAGGGGACTGGAGAAG-AACATGAGTTTCGTAACCCTTACGAATCAGAAGGGTTCTGTGAATGCCTGTGAGAAGGGACAGTAGCAGGGATTTAAAAAGATCTCTGGTCC-----GCTTGTGAGATTCTCCAGC-----CAGGACAGTTGTTCTTATTTTTAAAGGGAACACTTCCCTCTAGTGCACTGTACTCTTTAGAGCAGCAGACAGCTGCAGAATTTGCAGCAAGTAGCAGACATCTCAGAGATAGCAAAGTCCTAACCCCTTGATTAGAGAAACAGGGAGACAGAAGATTTAAAACCCACTTTTTAAACTGAGGAAGTCTCAAATAACTTAGCACATTTATAGTATCCCCTTTACAATTTTTAAGGCTCATTTTGGAAAGTGTGTATTACCATAAACATGGTCTGCAACATGAGGTGACTGTAAGGCAGTGTTCTCTTTCCTCTAGCATTCCTATGAGAAGAACCC------CGAATGGACAAGTCAA-----ACACGAACGCTTCCTTCCCTACACTTGCTGTATTCAAAATTAACAACATGAAGGCCATCAGCAGGAGAAGAGAT-TGTGGAACTGTGCCATTTCCTCTGAGCTTTCTTCTTCACACTAAACCTTGATAGTGGAATAGAGGTCATCTATCTGCGACCTGAAATAGTTCCGCAGCTCTGGCCTTTTCGCCTTCATTGTTGGAGTCAGAAGGCCATTGTCGATAGAAAATAATTCAGGGTGCAATGTGATGCCTTTGACCTGCCAATAAACAAGGCAGTTAAAAGAGGAAAAAGGACACGGGCCACCAGTCTCAAAAGCACGTAAGCCTTGGAGGGGATCAACACTCTCCAGCCATCCAATCCATCCTCTCATTTCAGCCAAGCTGCACCTTCTCAACAAAGGACAGGCATCCTATTCTTAGGATAGGATTCGGGATCATATTCTGATATCCAGGAAAAGAGAATAAATGCTTTTGATTTAAAAACCTTTCCCCTGTCAAACTACTCCATTATTTATTCCTCATGTATGTCTTTAGGTCACCCCATATGTTTATATAATCTACCTGTAAAAAAATCTTAATGGAAAATTTGTTTTACAGGAATTCACCCACTCAGATGAAGGTCATACCTGTTCAAATGGTTTCAGACCAGAATCCTTCCCAAGTCTCACCATATCTTCGAGGATAGCTTTTTTGACATCCTAAAAGGGTAAGAAAAATAAATTACTTCCTCTGTTAGAGGT---CCCTGAATATCTACAGGTACATTTAATGCCAAGTTATGATGAGGACAGACTGGACCCTTCAGAACCTTACCTTATTTCTGCACAGTTCCTCAAACGACCCTTCAAATCCTCTCTTTTGGGCCCAGGAACATAATGTCTCAACATCTGGTACCACAATTGCAATGAGAAATGCCT chr4 - 94230402 53358581 53358580 53360663 40869740 40869739 40871822 2083 AAACAAACACTTCACTGAGTTGAAATGCAGAAATATTTATTTTGGTTTCCTTCATTGGTTTTGAAAATT--GTTTTGGTTTTATAAAACATAGAAATAGCCAACACT--AAGCAAACATTTGAA-TTCCAATGTAACAAACTACTGCTCTAACAGTTGACTTGGATTTGTGTACCTTAATTGCACACACGTATGAAATTATGCTACAGAGTAGTGC-ATTACAATCACACAAATCTTAGTGCAAACCTTGTTGTGCTTGTATCTTACATATATCCATGTTTTCAAA-------AAACAG-----TAATGAGTTCTAATGCAAAACCAACTCTGTTAAGGATAGCAAAAGACTTATGTTGTCATAAGGCTTATTTCTGCTGATTTCTGAGACAAAAGGTAAATAGTTCTGTAGTTTATCTGGGAATTTGTTTCTTATCCCTGAACAAATACCCATCCAGTGCCAACACT---GTTTGTTGGCACATCTGAATACTTCCAATTACTGCAAAGCATCAGGCA-----AAAAAAACATTCTACCTGACCTATT-CTG-CTATTCCATGAAGAATACTCAGTGGCTCATACACACAGCACAG----AAAATGGAGGTTACGTCAGAAGCTGTTCTGCTTAGAGGACCTGGCA------------------CTTTT----TAAAAAACACATTTTAAATCCACATTCATCATGGGGAAAACGAGTGACT-AGTACAGGTGC----GATACTTACCTGACAGTCA-------GCATAGCCCAGCCTCTTAGATCATTTTTGT--TTCTAGTGTTCTTGCCAGAGTTAGAATCTGCCCACTAAATGGGCAGGCACTACTCTGGAATTGTGTTAATGCAGCGAAGGCTACACTTGCTGAATTAACTGCTTCTACA--CTTCCAGTGCAGAGTCACCAAATGCAAGTTTAGCCTGAACCTGTATTAATCAG---TCTCTTTTGTACAGAGTCCTGACTTCTACCTTACAAAAGTAAGCCTCAGAACTGGCTGTAGATACAGAAGGGAAGAAACCCTTGCCTCACCCCAGTTAATATTAGGACTAATTAAAGATGCAATATCAGCTATATAACT-----------GTAAGGTTTTGTG---------------------TTGATGGGTTTTC------TCTCCCTTCCCCCCAGACTAAGTAACTCTCCTGAGGTGGCAAGATACTTAGAGGCATTTCCAAACCTGCCAAATCCTTTTTTTGAACTG------------------ACAACTGCAAGATACACTGCAGACAGCAAACATGCTGGCAAGAAGAAAATCTTAGCTCCTTGGTTAAGGAGA--------------------GTCCCATTTTT--GGCCAATGAAGTTTTAAATAACTTA-----TATATAGT-TACCATTTATAGTT---AAGGCTCTTTTTGGAAATTGTAGGTCACCATAAAAACAGTATGCAACACAACTTGACAGTAAGGCAGTGTTCCATTTCTTC-AATGTTCCTATGGCAAGTACCCATCCCATTTTTGTACAAGTTTATGATTGCACA---GTTTCCTTCCCTATATTTGCTGTAGTCAAA-TTACAGATATGAAGACCAACAGTAG-ACATCAGATGTGTGCCACTTTACTCAATCCACTG----------------TTACATTTTGGTATTAGCATAGAGTTCATCTATCTGCGACTGGAAATATTTCCGTAGTTCTGGTCTCTTTGCTTTCAGTGTTGGTGTCAGCAGGCCATTTTCAATAGAAAACATTTCTGTGTGCACAATAATGTCTTTAACCTGGAAAAGAAACAGACAGT-------------------------------------------------------------------------------------------------AACCAAGCTGCA--TTCTTTGGAATACACGAG------GTTTTTAATAGAG---------TCA-----------CCATAAAAAAAGACTA--------TTACTTTAAAATATTTCCAAATGCAAATTA------------------AAATCAGTTCTTAG---------TCTGACTATAT--------TGTTAAAGATTGTT--TAAAGAATTAGATGCTCAAG-----------TCTAATCAGCATCTTACCTGTTCAAATGACTTCAAACCAGATTCTTTACCAACTCTCACCATGTCTTCTAGGATGTGCTTTTTGACATCCT---GTGGATACAAGAATACATTG-TACAGCTCAAAAAAGTTGATGCAGAATAGCTAGCTGTTTACTTAG---CTATTTA-----------------------------CTCACCTTGTTTTTACATAGCTTCTCATATGTGCCTTCAAATCCTTTTTTCTTGGCCCATTTGCACAAGGTTTCGGGATCAGGTACCACAACAGCTAGTAAGAAGGCCT ...x.:.::.:.....x.x:.....................................x.....:.....--..........-.........................--...........::..-::....x..:.....:..------------.......---......:.x:.x.---.x.:...::......:...x.....x:.......:-........x...-.xx::.........:..:..............x.x.:.:..:.x.----.:...x.-------......-----.x.x:x..x.x....xx.:x:...:..x..:..:x:.:.....-....:.::-----....:.:xx.:.x...:.:.....:x.:.:x..xxx....x.:.:.----------....::.xx..x-----.....x.:.x.x:x..::x:.x::.x:.x...::---.xx.x.....x::..-:..:..x.::x..-------.::x......:.-----.x..:......:------:.:....-...-.:...:..xx...--......:--.:x:....x.x.xxx.:..----...:x::x.x..:.x.x...:x:.:..:.--..:.:.:.xxx....------------------.....----.:....x......xx.....:::xxx.x.:-.:x:x.:.::.....::.-...:x..:.:x----..:.x...:::::xx....-------....:..:x.x..xxx..:x..x..:...x--.x..x..x...x:xx:...:.:x:.:x.x.x::x:.....::---------x.:...:..xx.x:.x:.xx.:.x...--::.x:.:..xx...:::.x.x.xxxx:..--..x...xx:x....xxx...----.:x...:x.x-...:.x:x:...x::...---:::...x.x.:..x:..:....x..xx.:..-----------...::xxx:..x:...----------------......:.x----::.:...::x:.x.::.x::xx:.:.::...x.-..:..x..:.x::....:-----------.x.:....:....---------------------.x.xx...x...x------....:xx...-----.x:.:x.x:.:.....x.x-----..:..:.x..:xxxx:....::...xxx:x..xx...:.:.xx..x....------------------...:.....::..x::.x...:::....:....x:::.x:.x.:x...:..:..:.:.....:...::..:.--------------------:x....:....--::.::.x.....:.:..........-----.x......-.x..x....:.:..---.......x.........x...:x:.:........x.::..x.......::.xx....x..............:x....:..-.:::........:x...x....------:xxx..x......:x.-----:...:---.:...........:.:........x.....-...xx:.:......:...x...:..-.x.xx....-....xx...x.:.:xxx...x...----------------:..x.::...:..x.:.x......x...............:x......x.....:..:.....:..:..:..:....x......x.....x........x..:........:.x...x.x.....xx:.:...:....:.....xx..x:..xx..:....-------------------------------------------------------------------------------------------------.:..........--....:x:x..x:x..::.------:..:...:x.x..---------...-----------...x:....:...x..--------.x.:..x....:x.....xxxxx....:..------------------.x:.xx..::....---------.x..x:.....--------...x...:.x.x..--.::.:....x.x.x:x..:.-----------..x:..x.:x:..x..............::....:......x..:..x....x.........:.....x.....:xx:.............---:x..xx.x..:....x...:-.x.xx..xxx.:.:..---:x.x.....x...xxx..x:.:...:---.x.x...-----------------------------..:.....:...:.:..:..:.:....x.:.xx............:.:..:.x......xxx:..:..x..:..::x...x..........:x..x.xx.::..x.... 69M2D10M1I25M2D15M1D18M12I7M3I13M3I35M1D12M1I45M4I7M7D6M5D43M1I8M5I46M10I12M5I34M3D15M1I13M7I12M5D12M6I7M1D3M1D13M2I7M2I19M4D29M2I15M18D5M4D30M1I18M1D11M4D19M7D30M2D42M9I27M2I29M2D20M4I10M1I18M3D31M11I16M16I9M4I33M1I18M11D13M21D13M6D10M5I19M5I50M18D72M20D11M2D25M5D8M1D14M3D81M1D22M6I16M5I5M3D30M1D25M1D9M1I24M16D161M97D12M2D18M6D13M9D3M11D16M8D30M18D14M9D11M8D14M2D20M11D91M3D20M1D16M3I26M3D7M29D109M 1294/1944 66.6% 2083/94230402 0.0% 538/1944 27.7% 131396999 58817556 +10110 chr4 + 190214555 184760340 184760339 184760507 168 ACCCAGAAAGCACATACCTGCAGGCTTTCTCCGTGGACAAACACCTGAGCAACAGGCTCACTTCGCATGTAGATATTTTCAATCTTTTCAGGGGCTATGTATTCTCCTTGTGCCAGCTTAAATATGTGCTTTTTCCGGTCGATAATTTTCAAGGTGCCATTCTGTTGA chr4 - 94230402 53361228 53361227 53361395 40869008 40869007 40869175 168 ACCAGAAGAATGCCTACCTGCAAGCTCTCTCCATGGACAAACACTTGAGCAAGTGCTTCACTTCTCAGATACACATTTTCTATCTTCTCTGGTGCTATGTACTCTCCCTGGGCTAGTTTAAATATGTGTTTTTTCCGGTCAATGATCTTCAACGTACCGTTCTGTTGA ...x::.:.:::.x........:...:.....:...........:.......xx.x:.......x..x:..x.:......x.....:..x..x........:.....:..x..:..:...........:...........:..:..:.....x..:..:......... 168M 131/168 78.0% 168/94230402 0.0% 0/168 0.0% 131399112 58815443 +9450 chr4 + 190214555 184762396 184762395 184762534 139 CGGCAACTTACTGGTAACCATTTTCCAATGTCCCCTGTGTGTAACCAGCCGTCTTTGTCCAAAGCTTCTGCTGTTTTCGCTGGGTCCTTCAAGTAGCCCTGAAATACATTTGGCCCTTTCACACACACCTAAAGAAAAG chr4 - 94230402 53361932 53361931 53362070 40868333 40868332 40868471 139 CGTTAACTTACTGGTAGCCATTTCCCAATATCTCCTGTATGAAGCCAGCCATCTTTGTCCAGAGCTTCTGCTGTTTTTTCAGGATCTTTCAAATAGCCAAGGAATACATTTGGCCCTTTTACACACACCTGAAAGACAG ..x:............:......:.....:..:.....:..x.:......:..........:...............:x.x..:..:.....:.....xx.:.................:..........:..::.x.. 139M 114/139 82.0% 139/94230402 0.0% 0/139 0.0% 131400464 58814091 +6071 chr4 + 190214555 184763159 184763158 184763269 111 TCACTCACCTCGCCCTCGCCCTCGGCAGCCATGTAATTCATTTCTTCCACATCAACAAGTTTTATCAAATTGCACGGCATCGGGGCCCCAACATGGCCTGTATATTAAATA chr4 - 94230402 53363543 53363542 53363653 40866750 40866749 40866860 111 TTACTCACCTCACCTTCTCCTTTGGCAGCCAAGTAATTCATCTCTTGTACGTCAACAAGCTTTATGATGTTACATGCCATTGGTGCTCCAACGTGACCTATTTAACAGACA .:.........:..:..x..:.:........x.........:....x:..:........:.....x.x:..:..:.x...:..x..:.....:..:...:.x..x:.:.:. 111M 82/111 73.9% 111/94230402 0.0% 0/111 0.0% 131399616 58814939 +5743 chr4 + 190214555 184764847 184764846 184764950 104 CCATACCTGCGGTCCAGTCTCCAGGCATGGTCAGGCAGCACCCGGCAGTGCACTCTGTCTGTCCGTATCCTTCATAAAACTGGGGCACCAAGAGATGCAACATT chr4 - 94230402 53364297 53364296 53364396 40866007 40866006 40866106 100 CTATACCTGCTGTCCAGTCACCAGGCATTGACAGTGAGCATCCAGCTGTGCATTCAGTCTGTCCATATCCTTCATAAAACTAGGA----AAGAAAACCAACACT .:........x........x........x.x...xx....:..:..x.....:..x........:................:..:----....:.xx.....:. 85M4D15M 81/100 81.0% 100/94230402 0.0% 4/100 4.0% 131400550 58814005 +6072 chr4 + 190214555 184765886 184765885 184765988 103 CTCACCTGACAGCCCAGGGCTGCTCTGAGGAACGTCAGCACAGTGGCAGACACCGGGGCGGCTCCTGTCACCATCAGCCGGACTCTTCCGCCCAGGCTCGACT chr4 - 94230402 53365365 53365364 53365467 40864936 40864935 40865038 103 CTCACCTGACAGCCAAGAGCTGTTCTCAGGAAGGTCAGTACACTTGCAGATACAGGTGCTGCTCCTGTGACCATTAGTCGTACTTTTCCTCCCAAACTTGCCT ..............x..:....:...x.....x.....:...x.x.....:..x..x..x........x.....:..:..x...:....x....::..:.x.. 103M 81/103 78.6% 103/94230402 0.0% 0/103 0.0% 131400521 58814034 +7714 chr4 + 190214555 184766619 184766618 184766759 141 TACCTGTACTTTGTGGAAGATCAGCCGGTCCCACAGGCTGTTGTTTCTGATGATGCCGCTGCGAAGCTCTGCTTCTTTCCTCTTGGAGGCAAAGTCCAAGAGCCATCGCTTCAGCGTGGTGTTTGCTTGTCCGAAAATCTA chr4 - 94230402 53366198 53366197 53366338 40864065 40864064 40864205 141 TACCTGTATTTTTCGGAAGATAACTTTATCCCAGAAACTGTTGTTTCTAATTATACCACTTCTGAGTTCTGCTTCTTTCCTCTTGGAAGCAAAATCCAGCATCCACTTCTTCAGTGATGTATCCGCCTGTCCAAAAATCTA ........:...x:.......x.x::x:.....x.::...........:..x..:..:..x.x:..:....................:.....:....:x.x...::x......:.xx..:.::..:.....:........ 141M 105/141 74.5% 141/94230402 0.0% 0/141 0.0% 131400421 58814134 +9112 chr4 + 190214555 184768303 184768302 184768469 167 GCTTGGAACTTACTCGGTCAAACATCCGGTTCAGCAGTCTTGGAACCACGGGGAAGACAGTGGGTTGAAGCACCTTGAGGTCATCCATGAGCAGCCTGATATCTCCTTGGAAAAATCCGATTTTAGCTCCATGACACAGCATTACACACTATAGGGGTAATGGAAAA chr4 - 94230402 53367884 53367883 53368050 40862353 40862352 40862519 167 GCTTTAAACTTACCTTGTCAAACATTCTGTTCAACAGTCGTGGTACTACTGGAAATACAGTTGGCTGTAGTGTTTTTAGGTCATCCATAAGTAGCCTGATATCCCCTTGAAAGAATCCTATCCGAGCTCCATGGCACAGAACTACACACTGTTAGAGAAAAGTAAGA ....x:.......::x.........:.x.....:.....x...x..:..x..:..x.....x..:..x..::::..x...........:..:...........:.....:..:.....x..::x.........:.....x.:........:.x:.:.x..x.x..:. 167M 125/167 74.9% 167/94230402 0.0% 0/167 0.0% 131400419 58814136 +4915 chr4 + 190214555 184770261 184770260 184770483 223 TAACTGTTCATAAATGTGAGCAAGTGGTAAATATGAAATGTGTGTGTCACTGGCACTCAAGGGAAGTGCTTTCTGTAAAACACAACAACTTAGCAGAACATACACA----AACAAGCAAGGAAAACAAAATTAAATGCCTACCTCTACAACTCTCTCAAACATATGGGCGAGAGGCAAGAAAGATATCAAAGTATCATCTGGGCAAGGATTGACTGTATTCTGTAAG chr4 - 94230402 53370325 53370324 53370514 40859889 40859888 40860078 190 TAAGTTTTCACATATGTG--TAAGAGGCAAAAACAAGCTCTGTTTATCACAGA----------------TCTCCGTAAGA---------------GAACATAAGCTTCTTAATAGTTCTGTGAAACAAAC----ATGCCTACCTCAACGATTCTCTCGAACATATGAGCCAAGGGCAGGAATGATATCAGAACATCTTCAGGGGTAGGTATAAATGTTTTCTGAAAG ...x.x....:.x.....--:...x..:...x.::.:x.x...x.:....x.:----------------.:..:....:.---------------.......x:.x----..:.:x:xx.x:.......x----...........x..:.:......:........:..x.::....:...x.......:.::...x..x...xx...xx.:.x...x.....x... 18M2D33M16D11M15D11M4I20M4D93M 131/186 70.4% 190/94230402 0.0% 41/186 22.0% 131399936 58814619 +5311 chr4 + 190214555 184773077 184773076 184773161 85 TTACCTCTGTTGCTTTCACAAAAGCTGAACAATCGCTCACTATGTTTCGGTGAGTGACCATTGCTCCTTTGGGGTTGCCTGTGGA chr4 - 94230402 53371740 53371739 53371824 40858579 40858578 40858663 85 TTACCTCTGTAGTTTTCAGAAAAGCTGAAGAATTGCTGACTATGTTTTTATGAGTGATCATAGCTCCCTTGGGGTTTCCTAAAGA ..........x.:.....x..........x...:...x.........:x:.......:...x.....:........x...:x:.. 85M 69/85 81.2% 85/94230402 0.0% 0/85 0.0% 131401337 58813218 +4638 chr4 + 190214555 184773661 184773660 184773905 245 ACCTGTAGTTCCACTTGTGAAACAAATTACTGCAAGATCTTCAGGTGCTGGAGGCTA----------------------------AAGAT---TAAAAAAAAAAAAAGCTGGTATAAA---TCAGAACA-------GAAAAGAGAACTA----TAAGCCACAAGGTACCAGGCTAGATATTGAAAACTACAAAG--------AGGACAGAGC--AGGGTCTGA---CACGGTGTGCTTACCTTGGGCTTCCGTCTGTTGGCTCTTCCCAGGTCCT----TAATTAGAAGAGAAAAAAAGTCTTAAAT chr4 - 94230402 53372549 53372548 53372855 40857548 40857547 40857854 307 ACCTGTTGTTCCACTGGTGAAACAGATGACTGCTAGGTCTTCAGGCTTTGGAAGCTATGAGAATTAAGAAAGTATTACTATGGTTAAGATTGCTAGAAAAAAAAATGACTTGCAAAAAACTTTGAAATACGAGCGTTGAAATAGTGTTACTTTTGAGCTACAGGAGACAGTATTATATAGACCAAACTAGCAAGTCACCCCAACTTCAGAATCAATTGTTTGAATTAAATGTATACTTACTATAGGTTTTTGTCTGTGTGCTTTTCCCAGTTCCTACAGTAAAGAAGGGAGACACAGAGCTTTAAGT ......x........x........:..x.....x..:........:x:....:....----------------------------.....---..:.........x::..x.:.x...---.:::..:.-------x:...x..x::..----.:...:...:.:x..x:x::..x...xxxx......xx...--------.xxx....::--.xx..:...---x.xx..:.:.....:x.:..:..::......xx...:.......x....----...xx.:::....x.x.:..::....:. 57M28I5M3I25M3I8M7I13M4I41M8I10M2I9M3I49M4I28M 167/245 68.2% 307/94230402 0.0% 62/245 25.3% 131401112 58813443 +12036 chr4 + 190214555 184776473 184776472 184777002 530 AGGGCACTCACCTCCATCGCCTTCATGCTGGTGACTTCCACCCCACACCTCTGGCCTCGTTCCACCAGTTCACTGCCGTAGGCATCCATGACAACTATGATTTTAAGGCCTGGTATTAACTTATTTTCTACACCCTCTAATAAGAGTTTGGCCTTCTCTGGCTTGTCAACAAAAACCAGAGAGAGTTCAGCTGTAAATGAAGAGATACAATGAAGAATAAGCTCTGGGATGTTAAAAGATTCACTCTGTCATATCCAGCACAAG--GATACTTGAAGTACTACATTCTTTGAATAAAAAGGTAGATATATATTTACATGTAAAATCTTTGTCAAATCAAATGTAAGCAAATGTAAAGTCACTGAACCTAACCAATAACTATGCCAATAATCCAGGCAAAGATCACAGACGTACCTTTGTTGACTATGTACGTGATGGCTTCATTTCCAAGGGTATCATAAAGTGGAACGATCACCATCGAATAAGCAAAGCATCCTTGTTCAATAATCACCCACTAAACAAACAGTAAAGGT chr4 - 94230402 53374955 53374954 53375413 40854990 40854989 40855448 459 AGCACGCTTACCTCTATTTCCTTCATGCTGAAGACTTCTACCCCACACTTCTTGCCACGTTCCAAAAGATCTGTGCCAAAAGGCTCCATGATCACGATGGTGCTGAGGATTGGAGTTTCCCCCTTTTCTACAGCAGTTAGCAGAAGTTTAGCCTTTTCAGGTGTGTCGCAGAAAACCAGCGATAAGTCAGCTG---ATGAA----------GGAGAACAACATTACCAATGTGACAAG-TTCAGACTAGATCATACTACAGAAGTCAGTACTGGAAGACCTCT-------------AAAGGCAA--------CTACGGATCAGTTCTTAGTCAGCTC------CATCATACGTTCAGTTGTTG-----AACTATTAGAAATGCCC-------------------------TACCTTTGTTAACAATGTAAGTAATTGCTTCAGTTCCCAGTGTATCGTAGAGTGGCACCACCACCATGGAGTATGTATAGCAACTCTGTTCAATGATAACCCACT--GCAAAAAGAAGAGAT ..x:.:..:.....:..:x...........:x......:.........:...x...x.......xx..x..xx....:x.:.xx.......:x..x...:.x:.:...x:...x:..xx.::x.........x.xx:..::.::.....:.....:..x..:x....:xx:........x..x.:x.......---.....----------.:....:..xx.:xxx:....x.x...-....xx..:xxx:..x.x:..x...--::....x....xx..x:-------------.....:.:--------:...:x:.x.:x....x....:x..------x.x..x.:..xx...:::..-----...:.x..:xx.....x-------------------------..........:..x.....x..:..x......x....x..x.....:..:.....x..x.:......x..:..x.:.x....x.::........:..x.......--:....x..x.:..:. 193M3D5M10D27M1D25M2I17M13D8M8D25M6D20M5D17M25D105M2D15M 313/457 68.5% 459/94230402 0.0% 75/457 16.4% 131401518 58813037 +4187 chr4 + 190214555 184777476 184777475 184777672 197 CAAAGAGAGGGAGGGAGGGAGGGAAGGAAGGAAAGAGAGAG---AGAGAAAGAAAGATGAGAGGACAGAGAGAGAA--------AGAGGAGAGATTGAGAAAGAAAAGAAAA----------AAGGAAGGAAAGGAA------AGGAGAGAAAGAGAGAAAGAAAGATAAATTAAAATCCGCCTGAAGAATTGAGGCAAATATGTTAAAAGATAATTAGCAATA chr4 - 94230402 8437548 8437547 8437768 85792635 85792634 85792855 221 CAAAGAGGAGGAGGAAGGGAGGGAAGGGATTAACGAGGCAGAGTAGAGAAATGAATTTGAGAAGAAAACATGAAAAACATGTACAGGAAAAAGGCAGAGAGAAGAAGTGAAACGAGTATTTTAATGACGAAGAGTAAGTTTAGAGAAAGGAAAAAGACAACTCAAGATGAAATGAAAT-GGTGTGAAAACT--AAGAAAAGACATTTAAAGAAAAAGAGAAACA .......::.....:............:.xx..x...:x..---.......x:..xx.....:..x.:x:x..:..--------..:::.:..::x....:.::..:x:...----------..x..x.:.:..x..------..:.::....:...x..xxx.....:..x.:....-x.:x....:.x.--.:.x...x.::..x.....x..xx..x..:. 41M3I32M8I28M10I15M6I35M1D12M2D31M 129/194 66.5% 221/94230402 0.0% 30/194 15.5% 176339928 13874627 +4739 chr4 + 190214555 184780329 184780328 184780487 159 TACCTCAGGTCTATTTTGAGCAAAGATGCCAATGAACTGATCTGGGGCAGTCTTGAAGCCCTTCTGGATCAGTGCTGAGCCTATGCACTCCGACAATTCTGCAACCTAAAATGGAGA--GGAAAAAGTCAGAAGCAGCATTGGGCCCCAACTCCAGAAACA chr4 - 94230402 53378341 53378340 53378500 40851903 40851902 40852062 160 TACCTCAGGTCTGTTTTGTGCAAAGATGCCTACGTACTGGCTGTGAGATGGTTTGAAGCCTCGGTGAAGTAATGCAGAGCCCACATACTCTGCTCTGTCCGAAACCTGGGGGGGAAATTAAGAGAAGCCAAATGAAAAATTGAG-TCAAGCTCCAACAATA ............:.....x...........x.:.x....:::xx.:.xx.x:........::xx..:.x:.:...x.....:.:::....:.x:xxx..:.x.....::::x...:.--:::.:...:..:.x.x.:x....:.-:.x.:.....:x..:. 117M2I25M1D16M 99/158 62.7% 160/94230402 0.0% 3/158 1.9% 131401988 58812567 +3276 chr4 + 190214555 184781552 184781551 184781634 83 TTAAAAAATCTTAAACTTTGCAGTTATTTTCTTTTCCTTTTTCTTTTCTTTGTTTCTTTCTTTTTTTTTCTTTTTGAGACATA chr4 - 94230402 56543107 56543106 56543185 37687218 37687217 37687296 79 TTCAGAGATTTGTAGCTTTGCAGTTGTTTTGTTTGCTTTTTTCTTTTCTTTTAGTATTTATTATTTATCC----TGAAACATA ..x.:.:..:.xx.:..........:....x...x.:..............xxx.x...x..x...x.:.----...:..... 70M4D9M 59/79 74.7% 79/94230402 0.0% 4/79 5.1% 128238445 61976110 +4604 chr4 + 190214555 184783921 184783920 184784005 85 ACTCACCTGTTTATATGAAAGCCATTCATAGGGTTGGTCTGGTTTCCGAGAGCCTAAACAAGGGCCATTATCTAAAAAAAGAGAA chr4 - 94230402 53379712 53379711 53379796 40850607 40850606 40850691 85 ACTTACCTCCTTATAGGAGATCCACTCATATGGCTGGTTTGGTTTTCTAACACCTAGACATGGACCATTATCTAAAAAACAATAA ...:....x:.....x..:.x...:.....x..:....:......:.x.:x:....:...x..:...............x:.x.. 85M 64/85 75.3% 85/94230402 0.0% 0/85 0.0% 131404209 58810346 +10365 chr4 + 190214555 184803313 184803312 184803563 251 CACTCACCGCCACTTCCACTGACTGCATGGAGAGGTCGCATGGCGGCTTCAGGGGTTTGGGTCTCGTGGCGTACCAGAAGGTGGTGAGTGCTGCAAAAGCTCCGAAGCCCATAAGCGTGTTGGTCGGAAGAGTACGCACGTACTGTCGGAAGTCAACCAGCTCTGGCATTCGAAAATACCGGAACAGCTCATGGGCTTGCATT---GTCCTGTGTTGATAGTTCTCTAAGCTGAATTCTGTTGGGAGAGAAAAA chr4 - 94230402 53385980 53385979 53386231 40844172 40844171 40844423 252 CACTTACCTCTACCTTCACAGACTGCATTGCTAAGTCACACGGTGGCTTTAGTGCTTTTGGTCTTGTTGCATACCAGTAGGTCGTGAGGGCTGCAAAAGCACCAAAACCCACCAGGGTATTTGTCGGAAGGGTGCGCACATACTGCCTGACATCCACAAGTTCAGGAATCCTCATATGCCTAAACAAGTCGTGTGCTTGCATCATAGCTCAGTGCAGTTG--TCCCAGTGCTGGAACCTGTTGACACAAGAAAA ....:...x.:..:.:...x........x.xx.:...:..:..:.....:..x.x...x.....:..x..:......x....x.....x...........x..:..:....:x..x..:..x........:..:.....:.....:.x..x:..x..x..:..x..x..:.xx.x..:..x:....:x..:..x........:---.::.x...:x.x.:--..:.x:x....:.x:......:x.x.::.... 203M3I14M2D32M 175/249 70.3% 252/94230402 0.0% 5/249 2.0% 131417333 58797222 +6629 chr4 + 190214555 184808500 184808499 184808818 319 CTTAACGCAGCAACCCAAGCTGGCAAGATGCTGCCATTCCGTGCCCCGCCTCCTCCCCTTGTACAATAGGCTATTTACAGAGGCTGAAAGCGCCCCCTTTGTCATTCACTAGCTGGGCAGAGCTCAGGCTTCAGGGAGGAACAAGAGAGCAGCAGCCAGGCCATTTGCTGCTCTTTCAAAGCACCACTCCAA-ACCTGTTGGATTCGTGCTCCTTAACCCTGGCTTGGCAAATTCCCTAAAGTTAGATTTGCTTAAGCCA----------TTCCCTTTTGAACCAAAAGAGCAGTCAGGCTCTCCCTAGAG------AGAGGGAGGTACGGCAGCT chr4 - 94230402 53389775 53389774 53390104 40840299 40840298 40840628 330 CTCAAGGCAACAACCCAAGTTGGCAGCTCTTGGCCGTTCTTTGCCGCTCCTACTCGCAGCACACAATGGGCTATTTACAGAGGGCAGCAGCCTGCCTATTGTCCATCCATAGCCAGACATCGTTCGAGTGCAACGGAAGAACAGGAGAGCAGCCGTCAGCTTCTTTAGTGA-----CAAAAAACAACCCCAAGAGCCAATGGCCTCCT-CCCCTCTACCCTAACACTGAGAGCACACCAGCACTGGGGTGGCCTGTGACAAAGGCAAGCTTTCCACATAGTACAGAAGGAACAGCTACACTATTTTTAGAGCCTCTTACAGAAAAGGAAGGCAGCT ..:..x...:.........:.....:xx:x:x...:...:x....x.x...x...x.xx:::.....:...............x:::x...x:x..:x.....xx..xx....::.:..xx.:..::.:x:x.x...:.....:.........x.:...x::x...:x..x-----....:x..x..:....-.x.::x...x:..x.-.:...:x.....::.x:x.x:.::x.x.:.:x::.:.:x.x..:.:x.x..----------....x:x.x.x..x:..:..:...::.x:..x.:::.....------.x..::.:.x.x....... 171M5D16M1I15M1D51M10I41M6I19M 190/313 60.7% 330/94230402 0.0% 23/313 7.3% 131418725 58795830 +3570 chr4 + 190214555 184824214 184824213 184824273 60 CTCCTGAGTTCAAGCGATTCTCCTGGCTCAGCCTCTCGAGTAGCTGGGACTAGAGATGCA chr4 - 94230402 18197139 18197138 18197198 76033205 76033204 76033264 60 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:...:.......:.x...x.xx..........:..:.........:....x.x:.... 60M 47/60 78.3% 60/94230402 0.0% 0/60 0.0% 166627075 23587480 +3005 chr4 + 190214555 184830075 184830074 184830119 45 CAGAGCAAGACCACATCAAAAAAAAAAAAGAAAGAAAGAAAAGAA chr4 - 94230402 32280597 32280596 32280641 61949762 61949761 61949806 45 CAAAGTAAAAGTCCACTAAAAAAAAAAAAGAAAGAAAGAAAAGAA ..:..:..:.x:x..::............................ 45M 37/45 82.2% 45/94230402 0.0% 0/45 0.0% 152549478 37665077 +3206 chr4 + 190214555 184895909 184895908 184895970 62 CTGCATGTATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704276 19704275 19704337 74526066 74526065 74526127 62 CTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..:x..::.......::.......x.....:...x::..............x:.x.xx.... 62M 46/62 74.2% 62/94230402 0.0% 0/62 0.0% 165191633 25022922 +3097 chr4 + 190214555 184895913 184895912 184895965 53 ATGTATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4 - 94230402 19704274 19704273 19704326 74526077 74526076 74526129 53 ATCTAAATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTG ..x..x...:.......::...:.:.x.....:...x::.............. 53M 41/53 77.4% 53/94230402 0.0% 0/53 0.0% 165191639 25022916 +3200 chr4 + 190214555 184895916 184895915 184895972 57 TATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704281 19704280 19704337 74526066 74526065 74526122 57 TACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ..:.......::.......x.....:...x::..............x:.x.xx.... 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 165191635 25022920 +3169 chr4 + 190214555 184895917 184895916 184895974 58 ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr4 - 94230402 19704280 19704279 19704337 74526066 74526065 74526123 58 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGATCTTGGTGT ...:.......::.....:.x.....:...x::..............x:.x.xx.... 58M 44/58 75.9% 58/94230402 0.0% 0/58 0.0% 165191637 25022918 +5445 chr4 + 190214555 184910944 184910943 184911081 138 TAAGCTTCAGCAAGAGACAAAACAGGGACCCTGGACCTGGTACCAGATTGAAAGGAACAGGAAGTGCTCTCCCCTCCCCAAAGCAGGAAAACCAGAGTTTGGCCCTTGCAGATTTCCACTCCACATCAGCGTCATCCT chr4 - 94230402 38780337 38780336 38780474 55449929 55449928 55450066 138 TGATCCTCATGATGAAATAGAAAAACGATTTGGGACTTGGTACAAGACTAAATGGTGGAGGTAATGTTTTTCCATCATCAAAATACGATAACCAAAGTTTAGAACGAGCAAACTTCCACTCCACATCACTGTCATCCT .:.x.:...xx.x..:.:.:..x.:x..:::x....:......x...:.:..x..x:x...x.:..:.:.:..x..x:....::.x..x.....:.....:.xx.xx...:.:...............x:........ 138M 92/138 66.7% 138/94230402 0.0% 0/138 0.0% 146130607 44083948 +8719 chr4 + 190214555 184911059 184911058 184911269 211 CCACTCCACATCAGCGTCAT-CCTCAATTTCCTGGAATGAATTGTTGATCATGGCAATTAAGATATTTAGCAAAACAATGACCATTGTAACATTATAGACTCCATAAAGAACATAACCAATGTTTTCAATGAATTTGTGGTTATCATT-GTAACCACTGATTTCACTTCAGAAAGTCCACATATAGCCCAGAACAGTGTCTTAAAACTCTGTT chr4 - 94230402 38782431 38782430 38782643 55447760 55447759 55447972 213 CCATTTGAGAACAGAGCCCTACCTCGATTTCTTGATATGAGCTGTTGATCATAGCAATCAGCATGTTGAGCAGAACTACCACCATCGTGACATTGTATATGCCATAGAGAACATATCCAATGTTCTCAATGAACTTATGATCGTATTTCAGGACAACAGAGGTTACTTCAGACAAGCCAAATATTGACCAAAATAAGGTTTTGAAGCTTTCTT ...:.:x.x.x...x.:.x.-....:.....:..:x....::..........:.....:.:x..:..x....:...x.:x.....:..:.....:..x.:x.....:........x........:........:..:..:.::.xx..-:x:..x..x..xx.:........x.:x...x....x.x...:..:.:x..:..:..:..:.x.. 20M1I127M1I64M 148/211 70.1% 213/94230402 0.0% 2/211 0.9% 146128628 44085927 +3053 chr4 + 190214555 184948903 184948902 184948990 88 ATTTCAAAATGAAAAGTAAAAAAGAGAGAAAGTAAGAAAAGAAG-------GAAAAGGAAAGGGGGAAGGAAGGAAGAGAGAAAGGAAAGAAAAG chr4 - 94230402 82357136 82357135 82357229 11873174 11873173 11873267 94 ATTTCAACATCAGCAGGAAAAAAAAAAAAAA-CATGAAGGTAAAATTGTCTGCAATGGAAACAGGAAGGAAAAAAAGAGGGAAAGAAAAGGAAAG .......x..x.:x..x......:.:.:...-:.x...::x..:-------.x..x.....x:..:.:.:..::.....:.....:....:.... 31M1D12M7I44M 61/87 70.1% 94/94230402 0.0% 8/87 9.2% 102591767 87622788 +3152 chr4 + 190214555 184968082 184968081 184968160 79 AGAGTAGATTTTAAATATTCCCACTCTAAAACAAACAAAAGAAGGAAAGAGGAAAAGAAAAAAGGAAGAAAGGAAGGGA chr4 - 94230402 93378357 93378356 93378425 851978 851977 852046 69 AGGGGAGATTAAAAATA----------AAAACCCACAAAACGAGAGGAGAGGAACAAAAAGAAAGAAGAAAGGAAAGGA ..:.x.....xx.....----------.....xx......x:..:::.......x.:...:..:...........:... 17M10D52M 53/69 76.8% 69/94230402 0.0% 10/69 14.5% 91589725 NA +29809 chr4 + 190214555 185017414 185017413 185018022 609 AGTTAACAATGCTGTGAAAATATGTTTGCAGAAAATAGACAATCGTTGGATTAAACGTATTCAAGTATGAAATAATGCCTTTTTGTGT-CAAAACTTGGGCGATGGGCGGGTACAAAAGTTCCCTGTGGCAGCTACTTGCTCCCTTTGTGAGCCGTGCGCTTTGGCGTCTCCACTTGG-GCGCATTACTCAGAGCCCTC---TAAGCGCGATTGTTTCTCCCTTTCTAATGACATTTACCGGATCAAAACATGCTGTTAATTCGATCAGAAGGCTTCACCCTCCCTGACAAAGCCACAATAATTTCTCCTGAAGTTTGTTAAATTGACCAAAATTAGGCAAATGAATAG-GGGTCTGTAGGCGCCCCCTCTCGCAGGTGACGTTGCATAATGCTTGCCTGGGCCAGCTGCATTCCCCCTTTTCTTCTCGGCCCACTCTTCTCCGTGTTGCCCCCCAATCCTCCCACCCGCCCCTTCACACACAAACACACACACACGCCCGCCAGTCTCTCCTCCCCCACCCTCTGGCATTATTAAAATTT-AGCCCAATGAAACTATTCATACTTTTCAATGG-ACATTTTCGTATAGGATAATAGGCTACAAATTGAGCCTCTTC chr4 - 94230402 53430021 53430020 53430555 40799848 40799847 40800382 535 AGCCGAGAAGGCTGTGAAAATATGTTTGCGGAAAATAGACAATTGTTGGATTAAACGTATTCAAGTATGAAATAATGCCTTTTTGTGTACAACCCCTCGGCAATGCGAGCGTACAAAAGTGCCCTGTGGCCGTTCCGTGCTCCCTTTGTGAGCTGTGCGCGCCG-CGTCTCCACTTGGCGCGGTCCGCGCGGAGCCCCCCTTTAAACGCGATTGTTTCTTTCTTTCTAATGACATTTACCGGATCAAAACGCGCTGTTAATTCGATCAGAAAGCTTTACTCCGGCGGACAATGCCACAATAATTTCGCCCGAAGTTTGTTAAATTGACCAAAATTAGGCAAATGAATGGCGGGTCTGTCGGCGACCCCGCTCGCAGGTGACGGCGCACAATGCGCTCC-GGGCCAGCTGCGGGCCCCGCTTTAT----------------------TTGCCCCTC-------------------------------------------------TTTTCTTCGCCCC---------GCATTATTAAAATTTCGGCCCGATGCGACCATTCACGCTCCTCAATGGCACATTTTCAAATAGGATAATAGGCTACAAATTGGGCCTCTCC ..:::.x..x...................:.............:............................................-...xx.:.x...:...x.x.x..........x.........x.:.x.x................:......x::.-.............-...xx:::.x.:......:.---...:.............::.............................::...................:....:..:.:xx.x.....x..............x..:.....................................:.-........x....x....x.............x:...:.....x:x..-...........:xx....x:...x.----------------------.......:.-------------------------------------------------x.:...:.x....---------...............-:....:...x:..:.....::..::.......-........:x.......................:......:. 88M1I75M1D13M1I20M3I147M1I48M1D25M22D9M49D13M9D15M1I32M1I42M 446/527 84.6% 535/94230402 0.0% 90/527 17.1% 131587393 58627162 +18357 chr4 + 190214555 185020268 185020267 185020762 495 TCCAGCAGAACTTCTAGCGGAGTTTGCCAACTACTTCCACTATGGCTACCACGAGTGCATGAAGAACCTGGTGCATTACCTCACCACGGTGGAGCGGATGGAGACCAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCGCGGAGCCCGCCTTTCCGCCGCTGGGTTCGCTCCCGGAGCCGGATTTCTCCTATCAGCTGCACCCTGCGGGGCCCGAATTCGCTGGTCACAGCCCGGGCGAGGCCGCTGTGTTCCCGCAGGGCTCTGGTGCCGGGCCTTTCCCCTGGCCGCCTGGCGCGGCCCGCAGCCCCGCGCTGCCCTACCTGCCCAGCGCGCCAGTGCCGCTCGCTAGCCCAGCGCAGCAGCACAGCCCCTTCCTGACACCGGTGCAGGGCCTGGACCGGCATTACCTCAACCTGATCGGCCACGCGCACCCCAACGCCCTTAACCTG-CACACGCCCCAGCACCCCCC chr4 - 94230402 53430804 53430803 53431217 40799186 40799185 40799599 414 TCCCGCAGAGCTGCTCTCCGAGTTCGCCAACTACTTCCACTACGGCTACCACGAGTGCATGAAGAACCTGGTGCACTACCTGACCACGGTGGAGCGGATGGAGACCAAGGACACCAAATACGCCCGCATCCTCGCCTTCCTGCAGTCCAAGGCGCGCTTCGCCGCCGAG---------CCGCTCCTCGCCTCGCCTCCGGAGCCCGACGCCGCCTTcccgccgccc-----------------------------cccgagcg-------------ccctccgggccc---cgccgAGCCCTTCCCGTGGCC-----CTACGGCCCCCTGCCC------GCCCCCGCGGCCCTGAGCG----------------GCCCCGGGCAGCAGCGCGCCGCCTTCCTCCCGTCCGCGCAGGGCCTGGAGCGCCGCTACCTCGGCTTGCTgggcccgccgccccccggcgccTTCGGGCTGCCGCACG-GCCAGCACCCCCC ...x.....:..x..xx.x.....:.................:................................:.....x................................x..:.....x...............:.............x...:.x.x...x...---------....:x..x.x:....::........x..:x:.x...x:.x..:..x.-----------------------------....:...-------------...x.x....:.---:....:...:.....x.....-----x::......x.x....------....:xx.x....x.x...----------------....x.x........:.:x.x.......xx.::.x.:............x..x.::......::.:..x.x....xxx...x....::....:.:::x...-.:....-x............ 169M9D48M29D8M13D12M3D21M5D16M6D19M16D101M1I6M1D13M 324/413 78.5% 414/94230402 0.0% 83/413 20.1% 131589464 58625091 +14207 chr4 + 190214555 185022671 185022670 185022985 315 TTCCCTTCGGCAGTGAAGCATTAAAGATATAATGTTACCCTGGAAATA-TAAATTATTAATATATTCAGCATTTTTGTCACTTCTCAACTGTTAACCAAATTAGACAAAACTTTCTTTTGCTAAGTAGATTTTCTCTTTGGGATTAGCTTTGGGAATGCACAGGGCCACCACAGTAAAAACTGCGGTCATTTACATATAATTTTGCAAACTTCCACTGGTCCATGACAGTCTTTGTACCTCAAATGTTGGTGTTCT---TGATTTTTTTCTT-----------TTCTCATTTAACTGTGGAGGATAAAACCCTGCTTTGGATTTACAGTG chr4 - 94230402 53431747 53431746 53432050 40798353 40798352 40798656 304 TCCCCTCCGGCATTGTAGCATTAAAGATACGGTGTTTCCCTGGACGTAATAAATTATTAATAGATTCG---TTTCGGGCACT--------GTTAACCAAATCAGACAGAACTTCCCCG-GCTAAGTAGATTTTCTCTCCGGGATTAGC-----------AGAGGGCCACCGCGGACAAAACTGCCGTCATTTACATACAATTTTGCCAACTCGCACTGGCCCGTGACAGTCTTTGTATCTGGAACGTTGCTATCCGGGATGGTTTTTCTTTTTGTCCTCCCCGTTTTCATTTGGCTGCGGAGGATAAAGCCCTCC---GGCTGCACAGTG .:....:.....x..x.............:::....x.......x:..-.............x....:---...:x.x....--------...........:.....:.....:.::x-..................::.........-----------.x.........:.:.xx........x............:........x....:x......:..:..............:..x:..:....x.:.:.x---..:.....:.:..-----------..:......::...:..........:....x.---..x.x:...... 48M1I19M3D11M8D28M1D29M11D97M3I13M11I32M3D12M 234/289 81.0% 304/94230402 0.0% 41/289 14.2% 131590924 58623631 +60671 chr4 + 190214555 185053777 185053776 185055234 1458 CAGCCCAGCAGGGTTAAAGGGGAGGTGGCCCAGCTCC-TCCAGGACCCGGGAGACCTGACACAGGCACACTCAA-GTGCGCCGGATAAAGAGGCTACAAAAACATGGCAGCCCCTAATGAGATATTTTTGCGCTTGGGCGAACGAA-GGGCTGCTTCAGGAGGCTAGTGACGAAAAACCTGCCTGGCTTTTGTGCGGAGAAACGGCAGGCCCTTTCCATCCTTTTCTGGGGGGTAGGTTCTAAAAAGAAGGCCTTTCGGAGTCTTCACGAGAGATGTGGATTTTAAGGGCGACCTTAGGTCATACAGAACTAATCAAGCGAAAACAATAAGAAAATGAGCCTGACAGTCAGCAAGTATCTGAGGACTTTATCAAAAAGAATTAGAAATGGACAAATTCACTGGGAGCTGCAAAGGATCAAATCTGCAAGGTGGCATTGTGTGGCTGGGATTAGATTATTTATTCATTGTTAATTTATTTATTTATGTATGTGCAAATGACCTTGCTGCTGCAGATGCTAAGGCGCCTCTGAAAAGGCCGGGATTTTTAGATCCAGGCCTAGAATATGGGTCCATTTAACTCATTCTTT-CCTTAAGGCGATC-AGCACTGACTTTTATCTAAGGAGATAGAGGAGGAAAAACCATATGTGTTCAGGGAACGATGCAGGACTCAAGCAGTCCTAAGGACCCAAGTATTTCAGCTTCATTCGAGATTCTGGGGAAGACTCCATGCAGTTGAATGTCCAACAAATTAGCAAATGAATGCTTATGTCAATATGTGAAAAAT-CCTGGTTAGTTTAAACAGATAAAAAAGCCTCTGGGGAAACCCCAGAAAATGCAAGCTCTTTTTCTTTCTCTTTTTAGTTAATTTAATTTAATTTTTAAAAGAAGGTACAGCACTTCCGGAGTTCCATGGAAACCCACA-AAAGTTACACAAAATAAAAAGGTCTA-ATGGATCCTTGATCTTGTACATGCTTGAAATCGTCTCAGTGCGACCACTGGAAGAA-ATAAGGAGATTGAATCAGCCATTCTCTG--TATCGTGTTCACTATTGAATAGTGCCCTGCC-CAAACT--GAAAAGCAGAGAACCC-----ATCTTCACCTCCTATACACGCCTAAGGAGTGAAAAACAAATAATTA-------CTCTGTATGT---------ATGACAACATAGTTTGTAGAGGGAACCTGAGGGTTAAATCAGT-------CATGATCTTATTTTCTCTAGGTTTAGGCA--AATAATGATGAACAAAAATGGTCAGTCTGTGTTCCTGCTGACCCAG-----------CACAGTGGGGACGCTGTGTAGGACATGACCTTTGGGGGAAA--GGACACAAGAACTCAGCGTGGGGGATCCAGAAAAGAAGTCGCACGTATTGAAGCCAGTAACGCCAAGCCAGTGAATTCTCCTTGACGAGAAAGACCCAC------TTAC-----TCTGCAGAAGAGATATATGACAGCTGACAATCCCTGGAGGAGAATCTTTCTACTAAA chr4 - 94230402 53439133 53439132 53440598 40789805 40789804 40791270 1466 CAGTCCGGCAGGGTTAAAAGGGAGGCTGCCCAAATCCATCCGAGACCTGAAAGTCTTGAAACACGTAAACCCCACACGCATCAGATGAAGAAGGCAGAAAGAAA-GGTGCCCCCTAATGAGTTTTTTTTGCGCTTGGGTGAGCGAAAGGGCTGCTTCAGAAGGCTAATAACTGAAAACCTTCCAGGCTTTTGTCCGGAGAAATGGCAGGCACTTTCCATCCCTTTGAAA------------AAAAAGAAGGCCTTTCGGAGTCTTCACGAGAGATGTGGATTTTAAGGGCGACCTTAGGTCATACAGAACTAATCAAGCGAAAACAATAAGAAAATTAGACTGACAGTCAGCAAGTATCTGAAGACTTTATCAAAAAGAATTAGGAATGGACAAATTCACTGGGA---GCAAAGGATCAGATCTGCAAGGTGGCATTGTGTGGC-GGGattaaattatttattcattgttaatttatttatttatgtatGTGCAAATGACCTAGCTGCTGCAGGTGCTGAGGAGTTTCTGAAAAGGCCCAG--TTTTAGAGCCAAGGCTAAAATATTGGTCCATTTAACTCATTCTTTCCCTTAAGGCGATCAAACAGTGACTTTTATCT-AGGAGATAGAGGAGG-AAAACCATATGTGTACTGGGAATGATGCGGGGTCTGAGCAGCACTAAGTACCCAAGTATTCCAGCCTCATTCAAGA-----------ATGCTGTGCAGTTTAATGTCCAGCAAATTAGCAAATGAATGCTTATGTCAATATGTGAAAAATCCCTAGTTGGTTTAAACAGAT-AAAAAGCCTCTTGGGAAATGGTAGAAAATGCAGGCTTTCTCTCTCTGTCCTTTT--TTAAAGAA-----------AGAAGGAGAAGCAGTACTTAATAACTTCTCCCCAAACTCACAGAGAGTTGCAGAAAACAACC--GCCTACACAGATGCTCTATCTTCTACATACATGAAATACTTCCCATGCTGCTGCTGCAGTACTAGAAGCAGCTTTTGCCAGGCGCTCTTTGAATCTCACGTTTGCTCTTCAGAAGAAAACAGTCACAATCTGGGACAGACACAGAGCCTCTGAGATGTCATCCTCTCGGAAAGGTGTGGCAAGTCAAAAGCCTTGGAGTGGGTCTGCCTTTCCACGTTCCCCTGAAATGATAAAATCAGT-----------CTTAAAGACGAAATCCATACAGACGCCTTGTTTCCCCTTCTATAATTTTAACCATTAACAGGAAAGGGCAAAAATTGTTATCTCATGTTTCCTTTGACCCAGCAGAGCAAAGCCACAGTGGGGACTCTGTGTAAGACATGACCCTGGGGAAAAAAGGAACACGAGATCTCAGCATGGGGGTTGGAGGTAAGAAGTCAAATGTATCGAAAATGACAGCAGCACATCAGTTAATGCCATGTGATAAGGGAGTCCTGCTGGGTTTTACGTCCTTCCGCAG-AGACGTACTTGAAGGTTGATTGCAACTGGTAAGGAAGATTTCTGCCTAA ...:..:...........:......:x.....:x...-...::....:.::..x.:...x...x.:.x..:.x.-::..::.:...:....:.x:.x...:.x.-..::x...........x.x..............:..:....-............:......:.:..x:.......x..x.........x........:.......x..........:...xx::------------...............................................................................................x..x......................:.....................:....................---...........:........................-.......:.................................................x..........:....:...x.::............x:.--.......x...:.x...:.....x.....................-.............-.:..x............-...............-..............x.x.....:.....:..:::::.....:x.....x...........:....:......:...-----------.:x.::.......x........:........................................-...:...:............-...........x......:xx:..........:...:.:.:...:.x..:....--....xxx.-----------.:...:..:x:...:....xxx:.x...:x:xx....:....-.:....:..x....:..xx--.:...-.::...x..:x.....x.....:.x......xx.::.x:...x:.::...x.:x.x-.x...x..x..xx::...x.::...:..--.x..::...::..x..x.:x..x:xx.x.:.-...x..--..x.::..x...:..:-----..x.:xx....:::x.x.x.:x.::x:...x....:.xxxx:.x.:-------..:.x:.:..---------....:..x..x:x.-----------.:.:.:.::x.....x:.-------.x.x:.:.:x::....x..:x....:x..--..:.:x:.x.::.......x..:.x::::....:.:x:........-----------............x.......:.........:.x...::...--.:....:...x......:......x.xx..:x........:x.:....:...:x::::.:.:x..x::....x...x.:x:x...::..::..x..::.------....-----..:....-...x:..:x...x:.:...:x::xx....x:::...xx.....:.:x.. 37M1I36M1I29M1D41M1I82M12D164M3D36M1D96M2D45M1I13M1I17M1D15M1D76M11D63M1I20M1D54M2D8M11D42M1I19M2D5M1I56M1I28M2I31M1I6M2I16M5I46M7I10M9I14M11D18M7I29M2I46M11I41M2I99M6I4M5I7M1D49M 1066/1398 76.3% 1466/94230402 0.0% 128/1398 9.2% 131614644 58599911 +71622 chr4 + 190214555 185070446 185070445 185072294 1849 GGTGTCAATGCCACAGGAAAGAGGAGAGATGGGAAAATAAAGTGTTATCACTGAGCAAGGTTTTAAAACGTAAAA-TTTCCCATGTACTT---TAGACAAACATAAATCTTTGGGCAACCAGAAAGAACTTAAAACATTCTGATCCAAAGGCCATAGTCCAAATCTTTTTATAGA-TTCCTCAGGAAAATAACTTAGGATAGATAAAAGTTGTCAGTGCTT---TTTGTAAACAATAAA-GTTAC---------------------AGTGATTTTTAAATGAAGC-GATGAGATGAAAATAAAAGACTAAAA----CTCTTTAGAATAATGATTTATGAGTAAACCAAGGCAAAGCTTCATTTCAATTTGG-AATAAAAGTGATTATGAAGCTAAAATTC------------------------------AAGAAACTGA--ACTCTAGGTTTCATATTACTTTTTAACATTTTCCTCTGCCAAA-------TAAATAAAGGTCATTTCTTCCCTCTTCCCTTTCCTTTCCCCTTTTGAGGGGTGATCTTTATGAAATGAAATGTCCTCTAAAGCTTACATCCAT-----TCTTTCCCGTCCTTTAACACAAAGAGTTTTACCAAATGTGGTTCACTCCGTTATTTTCTTCTGCCCAATCCCAATACCTGGGTGTGTTTGCTTAGATTTCAAGCTACTGCTAAATTTTT-------CAATTTCTGTCAGTGCT--CCCACCCACTGGAAGTAGAAGTTTCTTAGCAGCAAAAATATTAATTAAATGAAGCAAAACCCCACTGTTTACTAACT--GCATATATGATTTCCTACCCAAGTACAA--ATTTCAGAGT------TAAGTGTCTTCACCAAATAA----ACTGAGAAACCCTAGACAGTGGGAAGACACAAGCATGCCTCATGTTGCCAAAGAAAATAAGAAAGACCTGACAAACTACTGGCTAAGCATTAGACAGACACATAGATAGAATCAATGTGCTTTTTCTCATGCAAAGAAAAAAA-TTAGATGCAAACTTTACATTTAAAACTGCATTGTTCCCCTTTAATCTGGCCACCATCCGAGTGGTGATCTGGATGTTAGAGAAGAGATGAATGGGAGACATTGGCAGGGATTGAAGCTTGGGGATGAATGTGGAAATGTAGAATGGATGTTTCTTTTTTTTGGCTTTGAGTTGACTGTTGTTTCTGTCTGTTTTTTAGAACTGATCCGAGAGGACAGGGAAGTCAGTGTGGGCGGCTCTAAGGAGCCTCCCTCTCTACAGCTGCGGCTCAGAGGATTACGGCGCTTCATCCACAAGGCAACATTGCACAAGTAGCTTTTGAACAAAAGTCATGGATACTATTAATGATATGGTAATCCTTAATCGAGCTACCTCCCAGTAGTGATTATACTGACATGGGAAGAATATCTAAGTCGTGGAGGCAGCCCACAACAACACTGTGTCATTGTTCACCCCGGGCTCGACCAGGACTAACTTTTACCAGCATCTCTAACGTCACCTTTCCCCTGATGCCTCCCCACAACCCCTGGCCCCAGCTCCCATTCCCGCCCCATCATAGCAAAAAAGTAGCAAAGAAAACCCTGATCCTAAATCTTTTTCTGGATTTT--TTTTTGCAAGTTCCCACACACATTTAGTGTCGTCTCAAAATTCACGCTGTCAACTGTCTCTAGGAATCATTTCCATCTGAGAAC-AGACCACACAAAGGTTAGTTCGGTGGGTCTCAGTGAAGATGTTTTAATTGTCTGACAATAGATTCTTCCATCATTTGACTTGCAAATACTGTCCTCTTGCTCTCAGATAACATGTTCAGAATTAGACCATTTGTCAATAAATTTCCCAAAACTCCTTAATTA-TGATACTGAAATACAAGTGGTTTGCCATTTGACAAGACTCAATTACAATC-----CAGCAGGGAAAATCTTATGGCT chr4 - 94230402 53447701 53447700 53449536 40780867 40780866 40782702 1836 GGTCTCATCCACAAGGGAAGGAGGAA----GGAAAATGGGAGTATCATCAACAAATGGAATAAGATAGTGCAGGCCTTTTCAATGCACGTCGCTTGAGAAACAGAACTGCCATGGAGACCACAAAGCATCTGAGACATTTTGACCCAAAGGCAGAGTTCCAAATCTTTTCAAAGAACTACCTAGGGAACT------GGCCAAAAACAAGTCTTAAATTTTTGCTTTTGTAATAAGTAAGCGTTACTTATCCTACCCGTACAATAAAAAACATTTTGCCACAAAGCAGATAAAATGAGGTGGACAGTTCAAAAAGTTTGCGTTAATAGAACACGTGATGA--AAATCGCTGCAAG---------CAATTAGACAATCACTTTGCATATGATGCCACATGTCTTCCGTTGAATGGAGATGTAAGTGCTTAATCAGAAAGTGAGGATTTTACATCTAATAGCTTATCTTACCATTCTACCCTCCCATAAGTTATGTGAGAGAAGATGGCTGTTTGTCATTT----------------------GGTTGGGATTTTTTCAATGAAATGCCAACAAACCCCT---TCCATGGCAGCATCTCATGGTATCTAATTCAG-GTGCCTTACTCAATGTGTTTCCCTGTATT------------CCACTACCAGCATTTCCGTAGAGCTGCTTC-ATTTTTTCCTATCGAAACGTTATTTCCTAAACATTTTCT-CCTATGCTGATTTGCTCAGTTGGGG-AGGAGCTTCTTGAAATGCAGTATCTTACC-------AGCAAAATAACA---TTTACCATCTATGCATTCAGCATTGTCCACACACACACACGCACTGCAAAGTATTTGTTTAGAGCCCTAACCAGACAAGTGCATTGCGG---TTTAGACACAG---AGGCGCAAGCATGCCTCACGTTGCCAAAGAAAATAAGAAAAGACTGACAAACTACAGGCTGAGCATTAGGCAGACACATAGATAGAATAAATGTGCTTTTTCTCATGCAAAGAAAAAAAATTAGATGCAAACTTTACATTTAAAACTGCATTGTTCCCCTTTAATCTGGCCACCATCCGAGTGGTGATCTGGATGTTAGAGAAGAGATGAATGGGAGACATTGGCAGGGATTGAAGCTTGGGGATGAATGTGGAAATGTAGAATGGATGTTTCTTTTTTCTGGCTTTGAGTTGACTGTTGTTTCTGTCTGTTTTTTAGAACTGATCCAAGGGGACAGGGAAGTCAGTGTGGGCGGCTCTAAGGAAGCCCCTTCTCTACAGCTGCAGCTCAGAGGATTAGAAAGCTTCATCCACAAGGCAACATTACACAAGTAGCCTTTGAACAAAAGTCATGGATACTATTAATGATATGGTAATCCTTAATCGAGCTACCTCCCAGTAGTGATTATACTGACATGGGAAGAATATCTAAGTCGTGGAAGCAGCCCACAACAACACTGTGCTATTGTTCACCCCAAGCTTGACCAGGACTAACTTTTACCAGCATCTCTAACGTCACCTTTT--------TCTCCCTATGA-------------------------------------AGAAAATGGGAAAGAAAAACCCTGATCCTAAATCTTTTTTTGGGATTTGCTTTTTGCAAGTTCCCACACACATTTAGTGTCATCTCAAAATTCATGCTGCCAACGGCATCAAGGAACCGTTTTCATCCGAGACCAAGACCACACAAAGGTTACTTCTGTAGGTCTCAGTGAAGATGTTTTAATTGGCTGACAAAAGATGCTTTGGTCATTTGACTTGCAAATATTGGTCTCTTGCTCTCAGATACCTCATACAGAATTACAAAAATTGTCATTAAATTTATGAGCACTCCTTAATTACTTTTGCTCAACTGCCAGCAAGTGACCATTTGATGTGA---AGGCAAAATCCTGAACAGCAGGGTCAGACCCCTGGCT ...x...x:xx..x:....:.....:----..:...xx::...:.:....x::.::::::.xxx.x.::.:.::x-...:.x...:..x.---.x..x.....x..x.x::xx..x:....x....x.::.:.:.....:...:........x:x:x............:.x...-:.x.::...:..x.------..x:.:.x.x....:x.x.:.x:..---.......xx.:...:-.....---------------------.:xx.....xxx.::....-...:.:....::xx:.x..x::....----:x.x...:x.x..::xx.x....--...:.:xx....:---------.....x.:-...x.xxx..xx.....x..:.x.xx..------------------------------x.....x...--.:.:..x:.:.x...x:x:x.:...x....:.x.:..x...x.-------.:.:x:...:.x::.x:..x:.x:..----------------------..x..:xx...x.xx.........:.xx.x..xx.:.---.....-----:x.:..x:.x:x.:...:x..:-.x.::....:x......x...x..x::..------------...x.x...::.::.xx..:x:x:.....x-....:xxx...::.xx.x:..x..-------..x.....-:.x:....--::::.:..x.x.::.-..:..:.....::x.xxx.:x..x...x:-------.......:xx..---.....:.x..--....x:.xx...x:.:..x..x::...x--.:.x..:...------.x..x.:.:.x....:.:..----.:..x.:---::......xx.---..:.:.............:.....................::x............x....:........:..................x..............................-...............................................................................................................................................................:...............................................:..:.................................:x.:..:.............:.............x::x......................:..........:.......................................................................................................:.....................::............::...:.........................................:--------:.....:.::.-------------------------------------.:....xx:.x..::........................:...:x...--...............................:............:....:....x.:x..x.....:.:...:....:....x.-.................x...x..:.........................x.......x....x...:x:..................:..x:................x.x::.x........x.xx.x......x.......x:x.:x............-.xx.:..x..x.:.x..:::x.x:........::x..---.:x:.x....-----........xx.:x.::x..... 26M4D45M1I14M3I82M1I14M6D25M3I15M1I5M21I19M1I26M4I23M2D13M9D8M1I28M30I10M2I43M7I26M22D37M3D5M5I22M1D29M12D30M1D24M7I8M1D8M2I15M1D29M7D12M3D10M2I28M2I10M6I20M4I7M3D11M3D119M1I503M8D11M37D48M2I84M1I162M1I37M3D10M5I22M 1323/1723 76.8% 1836/94230402 0.0% 239/1723 13.9% 131622745 58591810 +53619 chr4 + 190214555 185079020 185079019 185079884 865 AATAAAAAATGTACGAAGAAATGAGAAA----ATGTGGAAAAGAAGTGCTAAGAATCCAACGTGGC-ATGAATCGGGGGTCTCTGACATTTCCATCTTCATCAAGGGG-ATTCTGTCAAGTAGTAAGTCAAGCTCTTCATCAGTAATCTCCACACCAAACCTGAAACAAATAGCAGTTAGCATCAGTCACCTCCCAAGTTCACATTTGGGTCACCCATGCCCACAATACCCTAAGCATATGGCTGCCATTAAAGCTTTGTGACTGCTGCAGTCCTCAAGATCAAGAGCACCACGTGAATATCAGAGGTTAATCAGGGTTTTGATCGCTTCAGCTTTCTCAGAGAAAG--ATTCTACCACAGAATCCCTGCATTGGTGGAGCACAGAAATAGAAACACCGGCATGTTGAATTGTGTGTGATTGTCCTCTAT-AAAAAGTTATTCATTACACTAAAACACTGGTATTGCTTAAACAAGTTAACTCTGAAAAGCCTTTCAATTGGGCTGCTTAGCATGAAAGAAAAGGTAGAGAAAAAAATGCCTTTCGAAAAACAGCTTCCTAATACTCTTGCAAAGCATTTCATAATGGCTTTAAAGACATTTTGCATACAAATATTTTTAAAGTGGCAGTGTTTATTCATCAGCAAGAAAGTGTTTTCATCTCTCAAGAACAATCAAAACATAATCCGTGAATCACTGGCATAAATAAGAATGACTTAAGCAATAATAATGAA-CAAGGCGTTCATTCATCATTTTGCAAAGCTGATAAAACCCAGCTGACTTTTGGAAAAGAGGGGAATATATTTT-CTTTTGACAACACAATGACAGAATA---ACATCAAAAAGTCTCTTTA----TCCATTTTCATTA--TTACTTCCTTA chr4 - 94230402 53456385 53456384 53457261 40773142 40773141 40774018 877 AAAAATAATTCTACTCACAAACGAGAAATAAAATGCATACACGGCATACCAGGAATCAAACCTGGCCATGAACTGGGGGTATCTGACATTTCCATCTTCATCAAGGGGGATTCTGTCAAGTAGCAGCTCAAACTCTTCATCAGTAATCTCCACGCCAAACCTGAAACAAACAGCAGTTAGCAGCACTAGCTGGCGGAGTTCACATTTGGGTCAACAGTACCCACAATACCCTGAGCATATGGCTGCCATTAACTCTTTGTTACTGCTTCGGTCCTCAAGATCAAGAGCACCACGTGAATATCAGAGGTTAATCAGGGTTTTGATCGCCTCAGCTTTCTCAAAGAAAGAAATTCTACCCGAGAGTCCCGGCATTGGTGAGGCACAGAAATAGAAATACTAGCATATTGAACTGTGTGCAATTGTCCTCTATAAAAAAGTTATTCATTACACTAAAACACTGGTATTGCTTAAACTAGTTAACTCTGAAAGGCTTTTCATTTGGACTGTTTAGCATGAAAGAAAATGGAGAGAAAAACTGTCTTTTCGGGAAACAGCTTCTTAGTGCTTTTGGAAAGCATTTCATAATGGCTTTAAAGACATTTTGCATACAAATA-TTTAGAAGTGTCAGTGTTTATTCATCAGCAAGAATGTGTTTTCACCTCTCCAGGACAATCAAAACATAATCCTTGAAATACTGGCATAAACAGGAATGACTTAAGCAATAATAAAGAGCCAAGGCATTCACTCATCATTCTGCAAAGCCGATAGAAGTCAGCTGACTTATG-------GGGAGATATATTTTGGTTTTGGCAAGGCAGTGAAAGGCTACACAGAGCATAGTATTTCTTTGTTGTTTCGGTTTCATCACCTTGCTTTCCCA ..x..x..x.x...xx.x...:......----...::x.x.x.:x:.:.:.:.....x...x....-.....::......x...........................-..............:.:x....:.....................:................:...........x..x.x:.:xx.x:.................x.x:.:.............:...................xx......x......x.:.........................................................:............:......--........xx...:....x.........::...............:..::....:.....:......::............-..........................................x..............:..:.....x....:...:................x.x.........xxxx.:.....::..........:..:.:..:...x...........................................-...x:.....x.......................x.........:.....x..:..................x....x:...........:.:.....................x..:-......:....:........:........:....:..x:..........x..-------...::.........-x.....:...x:..:...x..:x..---.x.x..x.:x:.:.....:----.:.:x......:.--..:...:.::. 28M4I34M1I41M1I238M2I81M1I183M1D118M1I52M7D14M1I25M3I19M4I13M2I11M 725/857 84.6% 877/94230402 0.0% 28/857 3.3% 131622635 58591920 +3021 chr4 + 190214555 185084818 185084817 185084853 36 TTAAAAACAAACAAACAACAACAACAACAAAAACCT chr4 - 94230402 49190517 49190516 49190552 45039851 45039850 45039886 36 TTAAAAACAAACAAACAACAACAACAACAAAACTCT ................................x:.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 135894301 54320254 +3235 chr4 + 190214555 185084818 185084817 185084853 36 TTAAAAACAAACAAACAACAACAACAACAAAAACCT chr4 - 94230402 79949137 79949136 79949172 14281231 14281230 14281266 36 TCAAAAACAAACAAACAACAACAACAACAAAAACCT .:.................................. 36M 35/36 97.2% 36/94230402 0.0% 0/36 0.0% 105135681 85078874 +3058 chr4 + 190214555 185096862 185096861 185096915 54 CTGTCAAACACACACACACACACACACACACACACACAAAAGAAAAGAAAAAGA chr4 - 94230402 76394388 76394387 76394441 17835962 17835961 17836015 54 CTGGGAGACACTCACCAGCTTACACACACACACACACAAAAAAAAAAAAAAAAA ...xx.:....x...xx:.x:....................:....:.....:. 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 108702474 81512081 +3167 chr4 + 190214555 185096871 185096870 185096919 49 ACACACACACACACACACACACACACACAAAAGAAAAGAAAAAGAAAAA chr4 - 94230402 51255353 51255352 51255401 42975002 42975001 42975050 49 ACAATCACACACACACACATCCACAAACCAAAAAAAAGAAAAAAAAAAA ...xx..............:x....x..x...:..........:..... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 133841518 56373037 +3104 chr4 + 190214555 185103712 185103711 185103789 78 CCTGGGTAACAGTGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAGGTGGGGGCGGGGAGAGATAGAGGGAGGTCT chr4 - 94230402 7660402 7660401 7660479 86569924 86569923 86570001 78 CCCAAACAACAACAAAAAATTGTCATAACTGAACAAAAAAAAAAAAAGGGGGGGGGGGGGGGGAGAAGGGGGAGGCTT ..:::::....:::.:.xx:....x:..xx:..x...............x.....x....:.:::x..:......::. 78M 50/78 64.1% 78/94230402 0.0% 0/78 0.0% 177443310 12771245 +3098 chr4 + 190214555 185109607 185109606 185109652 46 AAAAAAAAAAAAAAAAAAAACCACACACAAAAAAAACAGGTGTCAG chr4 - 94230402 43721830 43721829 43721875 50508528 50508527 50508573 46 AAAAAAAAAAAAAAAAGAAATCACACAAGAAGAATACAAGTGTTAG ................:...:......x:..:..x...:....:.. 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 141387777 48826778 +3077 chr4 + 190214555 185119631 185119630 185119693 63 CAACCTTCACCTCCTGGGTTCAAGCGATTCTCCTACTTCAGCCTCTGGAGTAGCTGGAACTAC chr4 - 94230402 18197129 18197128 18197191 76033212 76033211 76033274 63 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC ..:..:xx.x..:...........:.x...x.xx:x:.......:.x:............... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 166922502 23292053 +3417 chr4 + 190214555 185129375 185129374 185129453 79 ATTGGCAATTCCTTCTCTCTCTCTCTCTCTTTCTCTCTTTTTTTCTTTCTTTCTTTCTTTTTTATTTATTTATTTTTTT chr4 - 94230402 50770951 50770950 50771029 43459374 43459373 43459452 79 ACTGGTGATTCACTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTTACCATATTTCCTTTATT .:...::....x:.x::.............:..xx...x.....x...x...:...:.....xx:x.....x:...x.. 79M 56/79 70.9% 79/94230402 0.0% 0/79 0.0% 134358424 55856131 +3425 chr4 + 190214555 185129381 185129380 185129444 64 AATTCCTTCTCTCTCTCTCTCTCTTTCTCTCTTTTTTTCTTTCTTTCTTTCTTTTTTATTTATT chr4 - 94230402 17388729 17388728 17388792 76841611 76841610 76841674 64 AAATCCCTTTCAATCTCTCTCTCTTTCTCTCCTCTTTTTTCCCTTCTTATCTTCCTCATGTATT ..x...:.:..xx..................:.:....:.::...::.x....::.:..x.... 64M 47/64 73.4% 64/94230402 0.0% 0/64 0.0% 167740652 22473903 +13556 chr4 + 190214555 185142987 185142986 185143636 650 GCTATAAATACGCGGCCCACATGCCGCGGTGACACGGTGTTCCCTGGGCTCGGCGGGACAGATAACATGAATGTGCCCTTTAAACGTCCCAAGTTGCAGGGACAGCCCCCGGCCC--AGCCTCGCTCCCGGAA------GCGCCTTCGCCCCCGATGCCCTCTGCAGCTGGGAGGAG-----GGGGCGCCCCGCACCTGCCCAGCCAATGCGCG-GCGCGAGCGCCGGCCGCGACCCGCCTCCTCTCGCGAGAGCCCGGCGGGGATATAAGGGGGAGCTGCGGGCCAGGCGGCGGCCCCCTAGCGTCGCGCAGGGTCGGGG-ACTGCGCGGCGGTGCCAGGCCGGGCG-TGGGCGAGAGCACGAACGGGCTGCCTGCGGGCTGAGAGCGTCGA----GCTGTCACCATGGGTGATCACGCTTGGAGCTTCCTAAAGGACTTCCTGGCCGGGGGCGTCGCCGCTGCCGTCTCCAAGACCGCGGTCGCCCCCATCGAGAGGGTCAAACTGCTGCTGCAGGTGAGGA------CCGCGCGG-----TGCAAGAGGCGGG---CGCGGGCGCGGCGGGCCGGGCGG---GGCGCGCGATGCGGCGC------------------------------------------GAGCTGCAGGGCGCGGGGCGCCGCGGAAA-----ATCTGCGCCAGGCCACAGGCCCGGGCGCCCGCCCGCCC---GCCCGCCCGCCCGCGGGG chr4 - 94230402 53469681 53469680 53470351 40760052 40760051 40760722 671 GCTATTAATACAGCAGGCACATGCTC---TGACATCGCGTTCCC----CTCAGCCA-CCAGATAACTTTAATTTGCCCTTTAAACGTCCCGAG-----------ACCGCCGGCCCTCACCGTCCCTCCAGGGGAACATGGCGGCGCTGCTTC----GCGCCCCCCAGCGGGGGCGGGTCCTGGGGGGGTCCC----------AGCCAATGTGCGCGCCCCAGGG--GGCCGC----CACCTCCTATCGCGAGAGGCCGC--GGGTTATAAGCGGG----GCGGCACGGG-----GCTCCCGGCCATTTggccgg--cggggcgcggcgcggggcTGCTGGGTGGGGAGGTGCGCG---GCTCG--TTGGCTCTCTCCGGGTAGGGGGTGTCGGACCGGCTCCCAGCATGAGTGACCAAGCGCTCAGCTTTCTCAAGGACTTTTTGGCCGGCGGGGTCGCTGCCGCCATCTCCAAGACGGCTGTCGCCCCCATCGAGAGAGTAAAGTTGCTGCTGCAGGTGAGGAggcggggggcgcggggggctgcgggcggcggAGCCCGACGGAGCTGCGCCACAGGTGGGCCGGTGCGCGACCCGGCGTGCCTAAATATGGGAAGGCGCTCGGCCGGCTCCGGTTTCGCCGGAGCTGC------CCGGGCTCCTCGGGGAGCGGGAGCTGGGCCAGGCGGCGGG--CGGGCGTTCG-CTGCCCTTAGCCGGCCGGCGTGCGGGG .....x.....:xx:xx.......:x---.....:x.:......----...:..x:-x........x.x...x.................:..-----------:..x.......--.x.x..x....x..::------...x.x::..::.----..x.:.:x....x...:x.:.-----....x.:...----------........:...-..x.x..x.--......----.:......x.........x...x--...x......x...----....xx.:..-----..:...x:x.:.:xx..x..--.....-:.x......x.x...::..:x...x.-..x...---..x..--:x....x:..x....:x.:.:.:....:----...x:..x....:....:..x..x:xx.....:..x........::.......x..x.....:..:...:..........x..x.................:..x..::..................------xx......-----...::.x.....:---..xx..x..x...xxx.:..:..---..:......:x.....:------------------------------------------.......------.x....x..x...::.-----.x...x.......x:.:..--......::..-.:....---...x...x..x:...... 26M3D15M4D8M1D36M11D11M2I16M6I13M4D21M5I10M10D12M1I9M2D6M4D23M2D14M4D10M5D20M2D5M1I26M1I6M3D5M2D28M4I127M6I8M5I13M3I23M3I17M42I7M6D16M5I19M2D10M1D6M3I18M 435/584 74.5% 671/94230402 0.0% 153/584 26.2% 131673306 58541249 +9275 chr4 + 190214555 185143091 185143090 185143601 511 GCCCCCGGCCCAGC-CTCGCTCCCGGAAGCGCCTTCGC-CCCCGATGCCCTCTGCAGCTGGGAGGAGGGGGCGCCCCGCACCTGCCC--AGCCAATGCGCGGCGCGAGCGCCG---------GCCGCGACCCGCCTCCTCTCGCGAGAGCCCGGCGGGG-----ATATAAGGGGGAGCTGCGGGCCAGGCGGCGGCC------CCCTAGCGTCGCGCAGGGTCGGGGACTGCGCGGCGGTGCCAGGCCGGGCGTGGGCGAGAGCACGAACGGGCTGCCTGCGGGCTGAGAGCGTCGAGCTGTCACCATGGGTGATCACGCTTGGAGCTTCCTAAAGGACTTCCTGGCCGGGGGCGTCGCCGCTGCCGTCTCCAAGACCGCGGTCGCCCCCATCGAGAGGGTCAAACTGCTGCTGCAGGTGAGGACCGCGCGGTGCAAGAGGCGGGCGC-----GGGCGCGGCGGGCCGGGCGGGGCGCGCGATGCGGCGCGAGCTGCAGGGCGCGGGGCGCCGCGGAAAATCTGCGCCAG-GCCACAGGCC chr4 - 94230402 77535313 77535312 77535792 16694611 16694610 16695090 480 GCTcccggcccggctcccgcccctccgcgccgctcggtgccccaaagccccgccccgctgcggcg-------gccccgccccctcccgcAGCCAATGGGCGGGTGGAACGCGGCGGCGCGTTGCCGTGGCGCGCCCCCGCCCGCGTG--TCCGCCGCCGCCCCTATATAAGGCGGCCATTTCGGCCCCGCGCCCGCCTCGCTGCCGCAGCGCCGCCTCCCTTCGGCTTCCGCCCGGCCTCGCCTCGTCG------------------------CCTCCCGC-----------------CTCCCGCCATGGCCGACGCGGCCGTGTCCTTTCTCAAGGATTTCCTCACAGGGGGGGTGGCGGCCGCCATCTCCAAGACCGCCGTCGCCCCCATCGAGCGGGTGAAGCTGCTGCTGCAGGTGAG--CGGCGGGACGGGGGCGGCGGGCGTTCCAAGGTCGCCGCAAGGAGAggggggcg------gcggcg---gcgggggggcgggcggccgcgcggagcggcgctgacggcgccgcgggcc ..:........:..-.:...:..:xx:x..xx..:x.:-....:.x....:x:x.x....x.:x.-------.......x..:x...--........x....xxx..:...x.---------....:.:.x....:..x.:....x.--:...x..xx.-----........x..xxx.x:x....xx...x.x...------..x:....:...x:xxxx....xxx.:..x....xx:...xx.:..------------------------.:x..:..-----------------..x:.:......x:..:xxx..:xx.xx...:..x.....:.....x:.x.....x..x..x..:...:.............x...............x....x..:.................--.x...x.::.x::.x........:-----..x...x..::.xx.:.x......------......---..x.x:.....x.x...xx......:x:x.xx:.x.:.-...:.:.... 14M1I23M1I26M7D15M2I24M9I25M2D10M5I33M6I46M24D8M17D124M2D24M5I24M6D6M3D38M1I10M 308/450 68.4% 480/94230402 0.0% 91/450 20.2% 107607778 82606777 +41299 chr4 + 190214555 185144714 185144713 185145904 1191 CCTTCTCTCTACCCTGCCTGTCCTCTGTCACCCACCCTCCCCTCCACCAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAGCAGTACAAAGGGATCATTGATTGTGTGGTGAGAATCCCTAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGTTACTTCCCCACCCAAGCTCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGCTCTTCTTAGGGGGTGTGGATCGGCATAAGCAGTTCTGGCGCTACTTTGCTGGTAACCTGGCGTCCGGTGGGGCCGCTGGGGCCACCTCCCTTTGCTTTGTCTACCCGCTGGACTTTGCTAGGACCAGGTTGGCTGCTGATGTGGGCAAGGGCGCCGCCCAGCGTGAGTTCCATGGTCTGGGCGACTGTATCATCAAGATCTTCAAGTCTGATGGCCTGAGGGGGCTCTACCAGGGTTTCAACGTCTCTGTCCAAGGCATCATTATCTATAGAGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGTGAGAGAGGGGCATCGGGGAGAAGGAG-GGTGGTGTGGAAAGAGGATCCTATGGGATCTATAACTCACAAAGGAC--CTGATATATATTGATCTTGTTTTTTCTAGTCTCTGGGATAATTGAGGCTT---------CTGAATGAGGAGGTGATGTGCATAAGTTAATAGCTGAA--GCGTTCCTTGTGTCCTCTACT----------GAAATAAACTCTGGCCTT-TAGTTATTCAGA--------------------GAGGAGGAGGGGGGAGCCTGTCTCCCTCTAGACACAGCCATAGCA------GTTACTGAGTTTAACTTGAAGCCACTTCCAATGCCCTGTA---TACAAGCTGAGCACTGCCCCTCCGGGGTCCGGAGAGGGCAGCAGCCACCTTTGCTGTCTGC--CTGGTCATATGTGAAGCACCTGCACAGGGGCAGGTTCCCCGCAAGGTC---------AGAGCATG-GAGCTGGAGGTGCAGTGGCC--TCTCTCCCTCCA---CCTGCTTTCTGCTGAGAACAGGCACTTCATAGCCGTTCGGCTTC--TGGGCTCTGTCCACAGGGATGCTGCCTGACCCCAAGAACGTGCACATTTTTGTGAGCTGGATGATTGCCCAGAGTGTGACGGCAGTCGCAGGGCTGGTGTCCTACCCCTTTGACACTGTTCGTCGTAGAATGATGATGCAGTCCGGCCGGAAAGGGGGTAAG chr4 - 94230402 53470366 53470365 53471557 40758846 40758845 40760037 1192 CCTTCTCCCTGCCCTGCCC-TCCCCTGCCACCCTCCTCTCGCTTCTCCAGGTCCAGCACGCCAGCAAACAGATCACAGCGGAGAAACAGTACAAGGGCATCATCGACTGCGTCGTCCGCATCCCCAAGGAGCAAGGCATCATCTCCTTCTGGAGGGGCAATCTAGCCAACGTCATCCGGTACTTCCCCACCCAGGCCCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGATCTTCCTGGGGGGAGTGGACAGGCACAAGCAGTTCTGGCGCTACTTCGCGGGCAACCTGGCGTCCGGTGGCGCGGCTGGAGCCACCTCGCTCTGCTTCGTCTACCCGCTGGATTTTGCCAGGACCCGGCTGGCGGCTGACGTGGGCAAAGGAGTATCCGAGAGGGAGTTCACGGGGCTGGGTGACTGCATTGTCAAGATCTTCAAGTCCGATGGCCTGCGGGGCCTGTACCAGGGATTCAACGTGTCTGTCCAGGGCATCATCATCTACAGAGCAGCCTATTTTGGGGTTTATGACACAGCCAAGGGTAAGA-----------AGCGGATGGAGTGGTGGCTGCGAGGGAAGATCC------------AACCAGTAAAGGCCCGCTAGGGCACCCTGCCCT--------------ACAAGGACAAGCAGGGCTGGGCTTAGTACTGCTCTAGGGGGCTG-GTGCTAGAGCATGTTTCTGAAATGCATTCCTGCCTTCCTCAACTTGCTGCTCCAGGCACAAGCCATGGGTTTGCAGTTGCTCCTGTTTCTGTTGCTTGTTTTTTTAACGTTCGTGTGGGAGCTCGTC-CCTTCTTGCAGCACACAGAGGGCTGTGCGTGAGAGAGCTTCTGGTCAGGGAGTGTCAAGTGGTCTGTAGATCACAAAATG------------CCATAATCCTG--------TCAACTTTTTTCACTCACAGCAGCTGTTCAT-TGTCAAA----TACAAAGTGAGAAGTTGCAGGCGTGTTCCTATTGACTAGACTGAGTGACTTTGGGGTTTGGTGGGTGACTGCTCCTTCCAGAGCCAGCTTTCTCATAA-------TGCTTTCCCTCTGTCCTGCCTCATTTGTTCTTGGTGGTAGGTATGTTGCCTGATCCAAAGAATGTGCACATCATAGTGAGCTGGATGATTGCCCAGAGCGTCACTGCAGCAGCAGGGCTGGTTTCGTACCCTTTTGATACTGTGCGACGTAGGATGATGATGCAGTCCGGACGAAAGGGAGGTAAG .......:..:.......:-...:...:.....x..:::.x..:.x............:................xx..x.....:........:..x.....:..:..:..x..xx.x.....:........:...x..x................:..:..:........x.....x..............:..:.................................x.....:.:.....x.....:x....:....................:..x..:.................x..x.....:........x..:.....:..............:.....:......x..:....x.....:........:..x.:xx..x..x.x......xxx..x.....:.....:..::................:.........x....x..x........x........x........:........:.....:.....x.....:..:..:..:.....:..x.........:...-----------:.x:..x....-.....:xxx..::..:.....------------...:x::.....x.--..::x::.:x:..x:..--------------x.x:...:..x:::....x---------...xx:x...:..:x:-....xx:..:xx:.xx.....--..:.....xx:x.....x...----------.:x.:..:.:x...x:..-:....::..xx:--------------------:.x.xxx:x.x......::...-..:...x.xx:..xx..x..x:------..x.xx...:..xxxx.x.:.xx::x..x.:..x:.....---:....:x..------------..:x::...x.--------x..:.:x::..::..xx.x..--...x....-...x..:----.:..x..x.:x.:...x.xx..:x.x..---------...x::x.-..x:.x.:...x::....x:--::x....:....---..x.......xx.:.-------::...:x:xx.:..:.x..:..--.x.x:::..x:x::...x...:.......:..x.....:........:x.x.......................:..x..x....:x...........x..x.....:.....:.....x..x.....:.................x..:..:..:...... 19M1D523M11D11M1I21M12D14M2I17M14D19M9I16M1D21M2I21M10I18M1I12M20I22M1D22M6I40M3I9M12D11M8D21M2I8M1D7M4D28M9I8M1I20M2I12M3I15M7D22M2I162M 816/1119 72.9% 1192/94230402 0.0% 145/1119 13.0% 131674348 58540207 +12627 chr4 + 190214555 185144761 185144760 185144953 193 CAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAGCAGTACAAAGGGATCATTGATTGTGTGGTGAGAATCCCTAAGGAGCAGGGCTTCCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGTTACTTCCCCACCCAAGCTCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGCTCTTCTTAG chr4 - 94230402 77535796 77535795 77535988 16694415 16694414 16694607 193 CAGGTGCAGCACGCCAGCAAGCAGATCGCCGCCGACAAGCAGTACAAGGGCATCATCGACTGCGTGGTGCGCATCCCGCGCGAGCAGGGCGTCCTCTCCTTCTGGCGCGAAAGCCTGGCCAACGTGATCCGGTACTTCCCCACCCAAGTAATGGACTTCGCCTTCAAGGACAAGTACAAGCAGATCTTCCTGG .....x.....:........:......:x:..:..x...........:..x.....:..:..:......x.x.....xx:x.........x..............x.x.:x.:..................x................:xx.x:.............................x.....:.:. 193M 159/193 82.4% 193/94230402 0.0% 0/193 0.0% 107608965 82605590 +10849 chr4 + 190214555 185145058 185145057 185145260 203 TTTGCTAGGACCAGGTTGGCTGCTGATGTGGGCAAGGGCGCCGCCCAGCGTGAGTTCCATGGTCTGGGCGACTGTATCATCAAGATCTTCAAGTCTGATGGCCTGAGGGGGCTCTACCAGGGTTTCAACGTCTCTGTCCAAGGCATCATTATCTATAGAGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGTGAGAGAGG chr4 - 94230402 77536453 77536452 77536655 16693748 16693747 16693950 203 TTCGCCCGAACCCGCCTGGCAGCCGACGTGGGCAAAGCCGGGGCCGACCGCGAGTTCAGCGGCCTCGGTGACTGCCTGGTGAAAATCTTCCGCTCGGATGGCCTCAGGGGGCTGTACCAGGGCTTCAACGTGTCCGTCCAGGGCATCATCATCTACAGAGCCGCCTACTTCGGCATCTACGACACCGCGAAGGGTAGGTGGGG ..:..:x.:...x.x:....x..:..:........:.x..xx...x.x..:......x::..:..x..:.....:x.x:.x..:......x:x..x........x........x........:........x..:.....:........:.....:.....:...........x:....:..:..:..x......::.x.:.. 203M 151/203 74.4% 203/94230402 0.0% 0/203 0.0% 107608605 82605950 +9135 chr4 + 190214555 185145753 185145752 185145904 152 CCACAGGGATGCTGCCTGACCCCAAGAACGTGCACATTTTTGTGAGCTGGATGATTGCCCAGAGTGTGACGGCAGTCGCAGGGCTGGTGTCCTACCCCTTTGACACTGTTCGTCGTAGAATGATGATGCAGTCCGGCCGGAAAGGGGGTAAG chr4 - 94230402 77536746 77536745 77536897 16693506 16693505 16693657 152 CCGCAGGAATGCTCCCTGACCCAAAGAACACCCACATCGTGGTCAGCTGGATGATTGCTCAGACGGTCACCGCGGTCGCAGGTCTGACCTCCTATCCCTTCGATACCGTTCGGCGCCGCATGATGATGCAGTCCGGCCGTAAAGGAAGTAAG ..:....:.....x........x......::x.....:x.x..x..............:....xx..x..x..:........x...::x.....:.....:..:..:.....x..:x.x....................x.....::..... 152M 120/152 78.9% 152/94230402 0.0% 0/152 0.0% 107609007 82605548 +13467 chr4 + 190214555 185146794 185146793 185147156 363 ACCAGCATTTGTTTCCACAGCCGATATTATGTACACGGGGACAGTTGACTGCTGGAGGAAGATTGCAAAAGACGAAGGAGCCAAGGCCTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGCGGTGCTTTTGTATTGGTGTTGTATGATGAGATCAAAAAATATGTCTAATGTAATTAAAAC---ACAAGTTCACAGATTTACAGTGAACTTGATCTACAAGTTCACAGATCCATTGTGTGGTTTAATAGACTA--------TTCCTAGGGGAA-GTAAAAAGATCTGGGATAAAACCAGACTGAAAGGAATACCTCAGAAGAGATGC-TTCATTGAG----TGTTCATTAAACCACACATGTATTTTGTAT chr4 - 94230402 53471917 53471916 53472272 40758131 40758130 40758486 356 ACCTTCATTTGTTTCCACAGCTGATATTATGTACAAGGGCACAATTGATTGCTGGAAGAAGATAGCAAAAGATGAAGGATCCAAAGCATTCTTCAAAGGTGCCTGGTCAAATGTGTTGAGAGGCATGGGTGGAGCTTTTGTACTAGTACTTTATGATGAAATCAAGAAGTATGTC---------TAAAACTCTACATCCTAATGTAGTTCAGTTGTTCTCAATCAACTTTTTAAAATAACTAT--TGTGATGTAATGGACAACAAAATATTTCCTAGGGAAACAGAATAAGATCTGAGTAACATCCAG--TGGAGAT-----------AGGGATGCATTTATTTAAAAGCTGCCCACTACAGCACAGTTGCACTTTGTAT ...xx................:.............x...x...:....:.......:......x........:......x....:..x....................x......:.............:..x.........:.:..::.x........:.....:..:......---------......---...xx:.x.::x.x..xx:x..xx..::...x..xxx..x.x.x.x.:..--....:.x....:...x.--------.........:..-:x..x........:.xx.x.x....--..:.::x-----------..:.....-..:...x.:----..::..:..x.x....xx..:.:....... 175M9D6M3I50M2D17M8I12M1I25M2D7M11D8M1I9M4I30M 259/339 76.4% 356/94230402 0.0% 41/339 12.1% 131674877 58539678 +9965 chr4 + 190214555 185146801 185146800 185146978 178 TTTGTTTCCACAGCCGATATTATGTACACGGGGACAGTTGACTGCTGGAGGAAGATTGCAAAAGACGAAGGAGCCAAGGCCTTCTTCAAAGGTGCCTGGTCCAATGTGCTGAGAGGCATGGGCGGTGCTTTTGTATTGGTGTTGTATGATGAGATCAAAAAATATGTCTAATGTAATT chr4 - 94230402 77537427 77537426 77537604 16692799 16692798 16692976 178 TTTGTTCCCACAGCTGACATAATGTACAGCGGCACTATTGACTGCTGGAGGAAGATTGCCCGGGATGAGGGCTCCAAGGCGTTTTTCAAAGGTGCATGGTCGAATGTGCTCCGAGGAATGGGTGGTGCTTTCGTCTTAGTGCTGTATGACGAAATTAAGAAGTACACATAAATTATTT ......:.......:..:..x.......xx..x..x:......................xx::..:..:..xx.......x..:...........x.....x........xx....x.....:........:..x..:...:.......:..:..:..:..:..:::x...xx..x.. 178M 137/178 77.0% 178/94230402 0.0% 0/178 0.0% 107609374 82605181 +6500 chr4 + 190214555 185164014 185164013 185164223 210 TTCCAAAATGCTTACTTAATGGGCTATATTGGCCAAGAGTGGATCTGGCCCGTCTTGACAATGGTGATGAGTTGAGATAGCCCATATTGCGATGATAGTCCATCAGTTGTTCTGAACGTTTCATACCAACTGTTGGTTTCACGGCCTCAAGCCTTTTCAATAAAGCCTTCAATA---AAGACAATTAATTTGAAAGGCAAGGTTAAACAGCAA chr4 - 94230402 53478198 53478197 53478408 40751995 40751994 40752205 211 TTTCTGAGTACTCACGAGACAGACCACGCTGCCTGGAAAGAGAACTTTCTTCTCTTGGAGCTGGTGAAGTACTTCCATAGCCCACATAGCGCTGATAGTCCCACAGTTGTTCAGAACGCTTCATTCCAGGTGTTGGTTTCACTGCTGTCAGTCTCTTCAGTAAAGCCTT-AATATCCAAGAAAAATACCAAGAAAGA-AAGAATGAACAAGAA ..:.x:.:.:..:..xx:.::.:.:.:::..x.::::.:x:..x..xx.::x.....:x:x......x.x::.xxx........:..x...x.........xx.........x.....:.....x...:x............x..:x:x..:..:....:.........-....---....x..x..x:xx.....:-...:x.:....:x.. 169M1D4M3I20M1D15M 137/208 65.9% 211/94230402 0.0% 5/208 2.4% 131685816 58528739 +3187 chr4 + 190214555 185164318 185164317 185164384 67 GCCTGGAACTCCTGGGCTTAAAGGATCCTCCCATCTCAGCCTCTCAAGTAGCTGGTATTACAGGTGC chr4 - 94230402 18197131 18197130 18197197 76033206 76033205 76033272 67 GCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ...:::.:..:.....:.:..:x.x.:.x.xx:x........:............x.:....x.... 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 166967187 23247368 +3011 chr4 + 190214555 185175234 185175233 185175283 50 CTCCTTCTCTCTCTCTCTCTCTCTCTCTTTTTTCTTCTCTTTTCTTTTTT chr4 - 94230402 50770963 50770962 50771012 43459391 43459390 43459440 50 CTGCTTCTCTCTCTCTCTCTCAATCTGTTTTTGTTTGTTTTTTTTTTTTT ..x..................xx...x.....x:..x.:....:...... 50M 41/50 82.0% 50/94230402 0.0% 0/50 0.0% 134404271 55810284 +16939 chr4 + 190214555 185190095 185190094 185191256 1162 CAATATATAATATTTAAACACACATTTTTAAGA-AGAAAAG--------AAAATTACCTTTCAAGAGATGATTCAGATCCATTGTGTCATGTAAGAC-TTTCTGTTTATGTCTGTGGTCTAAACTGGAGTCTAACACTGAAGACGACTTTGAGGAGACATCAG---GCTCATGTTTTTCTTTCCCTTTTTTGGCTGCTTTCAAATATTTTGAATTATTTTTCAAATCCTCAACATCTTCATATATTTCTTGGCTCACATTTTCTTG-CTTTTTAATTTTCACTTTTTGATCATTTGCTATGCCCAGTTCAAAAGACTGAAGAGGGCTAATGTCTGGAGTTGATAAGGGACTTACGTCAGTCACAGTATCTTCAGACTCCTCAGGGTAGTGGCCACATTTTGGTGTAGTACTTGAAGGCTGTGTTTCTGTCGATTTTATTCCTGATTTATACTTGTGTTTTGGTGACAGGAGGGTTATACCAGATACATGTTTCTTAGATGACTTAGATGACGGAGACGAATCAGATAGATGGCTATCAGACCCTGCATCTAAACAATCTGTACCTGAACCTGAAGATGAGGAAGATAAAGAGGAGGAGGAAGAGGAGCTAACTTTGCAATACTTTTTCCTTATGCTTTTTTTAACGTTAGTAGATGGTTTAGCGGACTTGGACTTCACATGGTATTTCTTCCCATCATCACTGCTTTCCTCTCCATCTGTGTAGTAATCATCTTCACCTTCTTTTACAATTTTGGGAATTCTATTTGGAATGGACACGTGTATTTTAAGTCCTGTTGTA-ACATCACAC------------AATTTTTTTGATCTTGAAGAGGCTGGCAATGAGAAAGAACTTACAGTTTGTGTAACATCATTCTCTACG-GGGTGTTCTGGGGGAAATTT-CACGTTTCT-TTCATTTCCCTTCTCAGTAAGATAATTTTCTGTTGTTTGCATT----------CCAGTGTTCGAA---------TTTACATTTTTTGTATCTTTATCTATTCTTTCCTTTGGGTCATCATTTTGCTTGTCAAAAACTGAGTTAGTTTCACATTTCTTTCCTTCTTCAAAGTCACTGTCAAAGAAAGAATGGTCCACTTCACCTTCTAATATATCTCCAAACTGATCCATGATGGCAAAAATATATCTGAAAAAAAAATGTAAACATCAGACTAAAGAGTGATTTCCAAA chr4 - 94230402 53494965 53494964 53496033 40734370 40734369 40735438 1069 CAACATAAAAAA---AACTACACATTTTTTATATAGATAAATACATTTAAAAGTCACCTTTCAAATGTTGATTCAGATCCATACCGTCATGTAAGCCATCGCTG-------CTGAAATCAGACTTGGATTCTAAATGAAAAAGAAAAAATAAAAATGCATAAGTATGTGCAAAATTGTATTTTAAAGCCTTAGA-GTATTCAAGCATTTCATAGTACTGAC--ATTCTTCAAAATACACAGATAACTCTTCTCTCACATTGTCTTGTCTTTTTTCCTTTTACTTGCTTCACATTTGAAGCTGCAAATTCAAAAGACTGGGTGGAACTGCTGTCTGGAGTTGACAAGGATGTTACATTAGTACCTGCATCTTCAGATTCCTCCACATGGTCTCCAAGATCTGGT---------------TTTCCTTCTGGTAATTTTATTGCTGATGCACATCTTTGTTTTGCAGGTGGAAGAGCCACGCTACAAGCATTTCTCCTGGA------GGAAGAATGCGATGAATCCGATAAAGAACTATCAGAATGTGCATCTGAG----------CTGA-----------------------AGGATGAGGAAGAGGAACTGGTAGTACTGTA-TGTTCTGTTAGCCCTTCCTAAACTGTAG--GGCTGCTTAGCTGACTCTGGTCTAATCTTCTGTTTCCTGCCATCATCACTACTATCTTCTTCATCTGTATAATAAT------------------TTATTTCAGGGCTTTCAGGAGGAACATTTTCCTGCATTCTCCTGCTTGCTGCAGACGTTACTCCAGATGTACCTGCATTCTCATGAACTGGAAAAAG-TGAAAAAGATGAAGCATCCCCAGGATTGCCTGCGCTATCTTCTAGGAAAGGACTCTTCTGCAAATCTGCGTGCTTCTCTTCATTTGCCTCCTC---ACAACAGTTTGC-ATCCTTTGAACTAGCAACCAAGTCAGGGTCTGAAAGAACTACCTTTGGACTTTCTTTCTCTCTATAT---------------TCACCATTTTCT---------------TCAGTTTT---CTTCTCCTCCTCTCCAAAATCACTCTCATAGAAAGTGTGATCCACTTCACCATCTGACGTGTCTTCAAATTGGTCCATACTTACTGAAGTGCTTCC----------TGCAACCACCAGA------AAAGGTTTCCAAA ...:...x..x.---..x:..........x.x.-...x..:--------...:.:.........:x.x..............xx:..........x.-.:x...-------...x::..x:.x:....x.....xxxx:..::x:.xxx.:.::.x:...x..---.:x..x:x..x.x...:xxxx::..:.x-.:x.....::....::x.x..:.xx:--.x..:....x..x:x..x...x:....xx........x.....-......xx:...:....x:.xxx......xx::xx.x.:............::x:.::..:x.............:....:xx....:.:...xx.x.:.........:.....x:x:.:..xx...x:x.:....---------------.x.x:.....x::........x.....x:.:.::.x.......xx.:::.:..:.::.::.:.x.x:...x.:..:.:..------:..x..xx.x..:.....x....:.x::........x:x.......:.:----------....-----------------------....x...........:..:::xx.:.x:..-.x..::x...xx.:..::.x...xx...--.::x.:.....x....:x.:::.x.:x.xx.:....:.x...........:..x..:...:.......:..:....------------------:x....::..:x..::.xxx....::xx:x.x..:...:.xxxx.:..:..:.-..:.:..x.------------x...:.:x...x..x...:.:.-..:x..x..x:...x.:::x...xx.xxx:x:.:::..::....x.-::.x::...xxx.x....:.-.::.:....-.......x...:...---.x:.:.:...x.-:.:x....x.:.----------:...x..::...---------...:x.:...:.x.x...:...x.---------------...:......x:---------------.:.....:---:....:::.:...:....:.....x...x......x:..:...........x...:.::.:...:....:..:.....:x.x:.x:..:.::x..:----------..:..x..:....------.:x.:........ 12M3D18M1I7M8I48M1I6M7D52M3I28M1D26M2D43M1I136M15D80M6D49M10D4M23D31M1D28M2D76M18D53M1I9M12I22M1D46M1I20M1I9M1I15M3D12M1D12M10I12M9I24M15D12M15D8M3D96M10D13M6D13M 652/1020 63.9% 1069/94230402 0.0% 191/1020 18.7% 131695130 58519425 +3241 chr4 + 190214555 185241493 185241492 185241577 85 GAGAGGGAGACCGTGGGGAGAGGG-----AGAGGGAGAGGAGGGAGAGGGAG-AGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGA chr4 - 94230402 7707280 7707279 7707370 86523033 86523032 86523123 91 GAGAGGCAAGCCTTTGTCCCAGGGTTTTCAGAGTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ......x.::..x.x.xxxx....-----....x.::...:...xx:.....-..:.::.:.......:...x...........::..... 24M5I23M1I38M 61/85 71.8% 91/94230402 0.0% 6/85 7.1% 177534213 12680342 +3030 chr4 + 190214555 185241505 185241504 185241562 58 GTGGGGAGAGGGAGAGGGAG-AGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGA chr4 - 94230402 7707312 7707311 7707370 86523033 86523032 86523091 59 GTGGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGGGA ....:::.:...xx:.....-..:.::.:.......:...x...........::..... 20M1I38M 43/58 74.1% 59/94230402 0.0% 1/58 1.7% 177534193 12680362 +3047 chr4 + 190214555 185241536 185241535 185241590 55 GGAGAGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGG chr4 - 94230402 7707314 7707313 7707368 86523035 86523034 86523089 55 GGAAGGGGGGTTGGGGAGGAGAAAAGGGAGGGAGGGGATGGAGAGGGAGAAAAGG ...::..:..xx.:..::...:.::.:.......:...x...........::... 55M 39/55 70.9% 55/94230402 0.0% 0/55 0.0% 177534222 12680333 +5914 chr4 + 190214555 185247277 185247276 185247388 112 TTTTCCTTTCATTTCAGAGTCCTGTGTATGGAAACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGGTAAGGATTA chr4 - 94230402 53512714 53512713 53512825 40717578 40717577 40717689 112 TTCTCTTTGAATTTCAGAGTAATTGGACTGGGAGCTCCCATGATTCAGTTCAGTCAAGGAGAGTGGTCATTTCTCACAACATGGATAAGGCACTGAAAGAAGGTGAGTCTTA ..:..:..xx..........xx.xx.xx...:.:...x.....x....:......x..:..:..:..x........:..:........:..x............:..xx... 112M 85/112 75.9% 112/94230402 0.0% 0/112 0.0% 131734563 58479992 +15952 chr4 + 190214555 185258814 185258813 185259116 303 TTGTTTTACTCATTGCTTTGTTTATTCCTGGTAGTGTTCGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATCTGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTTGTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGGTAACTGTTCTAAGCAACTTACCCCCTTTTTTGCATTAATTTTTTTTAATTG chr4 - 94230402 53518381 53518380 53518672 40711731 40711730 40712022 292 TTTTGCTATTTATTGTTGTACTTTTCCTTTTCAGTGTTTGACTACATCTACAGAGATTACATCCTGTCCTGGTACGGGCAACTCAGCAGAGATGAAGGGCAGCTGTACCAGCTGCTGTCAGAAGACTTCTGGGAGATTGCCAAGCAGCTGCGACTGAGGCTGAGTCACATTGATGTAGTTAAAGTCGTCTGCAGTGATGTAGTGAAAGCTTTACTCACGCACTTCTGTGACCTTAAAGGTGCCAATGCCAGGTAA-----------AACTCAAACTGCGTGTTTCATTGGATTTTTTTGCTTG ..x.x:..:.:....:.x.::..x.:.:.xx:......:.......x:..:...........:...........:..:x.x..............:..:..:..x.....x.....x.::........:.....:.......::.......:x.xx..:.........:.x.....:........:.......:......x....:::..........x..:...........x....x................-----------....:.xx.:x:x.x..x....::x.......:x... 255M11D37M 224/292 76.7% 292/94230402 0.0% 11/292 3.8% 131740433 58474122 +3502 chr4 + 190214555 185261078 185261077 185261191 114 AAGAGGACAGTATTCTGTCTGTCTGTCTGTCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATAATTTTTTATTTTTATTTTT chr4 - 94230402 57691355 57691354 57691466 36538937 36538936 36539048 112 AAGCAAATAGGATTTTATTCATCGCTATACCTGCTCTCGTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTATTTATA--TTTTAATTTGCATTTTT ...x::.:..x...:.:.:::..xx.x.::...:::::..:x...::.:::..:x.......:..:x.........:::.x.:..:x...x....--....x....x:...... 95M2D17M 69/112 61.6% 112/94230402 0.0% 2/112 1.8% 127569723 62644832 +3018 chr4 + 190214555 185261118 185261117 185261200 83 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATAATTTTTTATTTTTATTTTTATTTTTTCA chr4 - 94230402 57691393 57691392 57691469 36538934 36538933 36539010 77 GTAAGTGCATACATGCTTGTGTGTATGCCTGTGTGTGTACATTTATACTTA------TTTATATTTTAATTTGCATTTTTTTA ..:x...::.:::..:x.......:..:x.........::..x...::x..------...x......x....x:.......:. 51M6D26M 54/77 70.1% 77/94230402 0.0% 6/77 7.8% 127569725 62644830 +12984 chr4 + 190214555 185264405 185264404 185264615 211 CTTCTTTCCTTCTTTTTCACTCTCTTTATTTAGACATGAAGAACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTTCTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAAATTCTCACAACAAAAGGTAGA chr4 - 94230402 53526365 53526364 53526575 40703828 40703827 40704038 211 cctttttttgtttttttccctttcttttcttAGGCAGGAAGATCCACCGAGACCTTTTTTGCTGCACCCGTGCTTGAGGAGCTCTGATGAAGAAGTAAGGTTCCTGCAAAAATGTTCTCAAATTCTGGTGTGTTGTCTCCTACCCTCAAAGGATGTCCAGTCTGTCAGCTTGCGCATTGTCCTTGCAGAAATACTTGCAACAAAAGGTAGA .:.:...::x.:......x..:.....x:....:..x.....x.x:..:.........x..:.....x.:..........:...x.....x........:..:..:....x:.......:::.........x.........x..............x......x.......:..:..x:.x...........x..::.............. 211M 168/211 79.6% 211/94230402 0.0% 0/211 0.0% 131738040 58476515 +13068 chr4 + 190214555 185266951 185266950 185267177 227 TTCTTCTTCTTCCTGTAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCTTGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGGACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGTATTTGGTCTTCAATTATAGC chr4 - 94230402 53527405 53527404 53527627 40702776 40702775 40702998 223 TTTTTCCTCTCC----AGTACTGAAACCAGTGGTGGAACTGCTGGGTGATCCAGATTATATCAACCAAATGCTACTCAGCCAGCTGGAGTACAGAGAACAGATGAACGAGCATCAGAAGAAAGACTACACATATGCTCCTTCATATGAGGAGTTCATCAAGCTGATTAACAGCAACACTGATGTTGAATTTCTGAAACAGCTGAGGTACTTGATGCTTCTCTGTAGC ..:...:...:.----...x:....:..:..:.....::.:...:..:..........:..:...........:..::x........x.........:..:.....:........x....:..x......x.....:..:..x..:.....x...........x............x.......x..:..::....:..:..:.....:...:.x:.:xx:.:.... 12M4D211M 173/223 77.6% 223/94230402 0.0% 4/223 1.8% 131739546 58475009 +7216 chr4 + 190214555 185287967 185287966 185288096 130 TTTTCTTCCTCTTAAATCTTTTTCTTTTCTCTTTTTAAAAATCAGGTATCAAATTGTAGTGGAAATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACAAAGGTAAGAGCCAGGTT chr4 - 94230402 53533211 53533210 53533339 40697064 40697063 40697192 129 TCTCCTCTCTCTTTATCCTTGTCCCCTGCCATTTTTAAAACT-AGGTATCAGATTGTAGTGGAAATAGTTCAGGCAACCACAATCAGCAATTTTCCCCAAGTGAAGAGGCAGAAAGGTAAGAATCCTGTT .:.:..::.....x.x:...x.:.::.x.:x.........x.-........:...............:.:.....:..:.....:....::.........x..........x..........::.xx... 42M1D87M 100/129 77.5% 129/94230402 0.0% 1/129 0.8% 131754756 58459799 +3259 chr4 + 190214555 185294776 185294775 185294834 59 TGCTTTCAATTTTAAATAATTAAGTTATAATTTAAGTACGGATACTTTTTTTTTTTAAG chr4 - 94230402 40609197 40609196 40609255 53621148 53621147 53621206 59 TGCTTTCAATTTTAAATATATAGTTTTAAATGCATGTACAGATACTTTTTTTCTATAAG ..................xx..:x..xx...x:.x....:............:.x.... 59M 47/59 79.7% 59/94230402 0.0% 0/59 0.0% 144685579 45528976 +3122 chr4 + 190214555 185302067 185302066 185302115 49 TTTTTGTATATTTTGTGTGTGTGTGTTTTTTTTGTTTTTTTTTTTTTTT chr4 - 94230402 56475244 56475243 56475292 37755111 37755110 37755159 49 TTTTTTTTCATTTTGTGTGTGTGTGTGTGTTTTGTTTTGTTTTCCTTTT .....x.x:.................x.x.........x....::.... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 128826823 61387732 +3903 chr4 + 190214555 185304436 185304435 185304515 80 CAACCTCCACCTCCTGGGTTCAAGCAATTCCCCTGGCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGCCACCATG chr4 - 94230402 18197129 18197128 18197206 76033197 76033196 76033274 78 CAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:xx.x..:...........::x...x.xx..........:..:.........:.:....--.:...:....::.. 64M2D14M 58/78 74.4% 78/94230402 0.0% 2/78 2.6% 167107307 23107248 +11677 chr4 + 190214555 185310587 185310586 185310830 244 TTCATGCCTTGT---------CCTCTGACCAGGTACTGTTTCTCACTCCTATTCAA--GGTAAAGAAACTGCGGCAATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGGTA-GAACTTTATAG chr4 - 94230402 53543407 53543406 53543656 40686747 40686746 40686996 250 TTTTTGCCTTGTAAAAAATGATCTCTGATT------TGCTTTGTTCTCAGATTCAAAAGGGAAAGAAACTGCTGCAATGAAAGCTGACCTGCTGAGAGCTCGCAACATGAAGAGGTATATTAATCAGTTGACGGTGGCAAAGAAGCAATGTGAGAAGAGAATAAGGTTCCTGGGAGGGCCTGCTTATGATCAACAGGAAGATGGCTTTTCTGATGAAAGTGATGGCTCTCAAAGTCAGAAGGTATGAATTGAATAG ..:x........---------:......::------..:..:x:x...xx......--..x...........x..............:..x.....:..:x.x..............:..:..:..::....x..............:..............xx.:x..........x.....:.....:..:..:..:.....xx::::x.....::.x..x..x:.......:.........-...:.xx.... 12M9I9M6D20M2I186M1I11M 184/238 77.3% 250/94230402 0.0% 18/238 7.6% 131767180 58447375 +8226 chr4 + 190214555 185320707 185320706 185320868 162 AAAGTTTTCTTAAATTCTCTTAATAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGGTAG chr4 - 94230402 53546720 53546719 53546881 40683522 40683521 40683683 162 AGAGGTTTTACACTTTTTTTCTTCAGATTCTTCAGTTTGAAGAAATTTTGGCCAACCCTTCATACCGAGAGCATTTTCGAATCTATATGGACAGAATGGATAAGGTGGCTTTGATTGATCTGTGGGAGTCTGTGGAGAACCTGAGGAGTGCTAACAAGGTGG .:..x...:x:.xx..:.:.:xx:...................x..:........:x.x.:x...........:...x....x..:.....x..:.....:..::x:...:.....::.:.x.....:........:x.::.:.:..:............:. 162M 117/162 72.2% 162/94230402 0.0% 0/162 0.0% 131773987 58440568 +16741 chr4 + 190214555 185323492 185323491 185323812 321 TATGTCTTACTTTTCCTTATCTTCCTGTCTTTTCAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCC---AACAAGGATGAGATGGTGAGTCACATT chr4 - 94230402 53547459 53547458 53547782 40682621 40682620 40682944 324 TATTCTCTTCTCCCTCTCCCCCTCCTTGCTTTGCAGGCTGAAATACCTCAGCTGGTGAGTGACATTTACCAGAATTTTTTTGTGGAAAGCAGAGAAATACCTGTGGAAAAATCACTCTATAAAGAAATAGAGCAAAGTCTTGTGGGTAATAAAGGCATTGAAGTATTCTACAGAATTCAGGCAGATGTTTACGAAACTCTGAAGGACAGATACTACCCCTCATTTATCGTCAGTGATTTATATGAGAGATCAGTCAAGAAGGAAGAGGAAAGAAGTTCTGTCCAAGTGACTCCTGAGGACAAAGACGAAGCTGTGAGTCACGCT ...x:::.x..::::..:x:.:....xx....x...:x......x..x..::.:..x:....x.....:........:........:....:.......:................:..:........xx....:x.......:..x........:................:...:....x.........:..:..:..:.....:..:..:.....:........:........::.:.......:..::x.x.x:..:..:..:....:.x:.x.:x:x..::...:.:.:---:....:..:..:::x.........::. 294M3I27M 234/321 72.9% 324/94230402 0.0% 3/321 0.9% 131776033 58438522 +8003 chr4 + 190214555 185332583 185332582 185332898 316 CTCTCCCCCTAGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGGTAACT-CTTTG---------------CTTTCAAGGTTGTCTTTGAAAGTTAACATTT-GTCTAATTTGGTAGTTTTCAGTTGAGGTTGAGAAGTGTCAGTTTCTTTTAAAATAATTTTAACCATG-AACAAGTTCCATTGTTATTTTTTTGCTTCT chr4 - 94230402 53551510 53551509 53551825 40678578 40678577 40678893 316 CTCTGCTTCTAGAGCCAAGG---------TTGTGGAGAAGCTACTGAAGAATGCAGCACAAGGATTAATGAGCAGGCCAGTTATGCTGTAAATAAGCTTCGCCAACTAAATGACAAGCTTAAATATAAGAAACAGGCTCTAAATTCCATATGTAATTCACCAAAACCCAACAAAAAGGTGAGTACCTTGGTTGTCTTCAGTCCTTTTTTAATATTGTTTATG-----TAATATCTAGTCATACCAGGTCCTTTCCGGGCAAGTCTGA----TGTCTTTTTTGTTCACCCTGTTTTTAAAAATGCAAACAGCTTGGTGATAATTGTTTCATTTTT ....x.::....:...x.:.---------.x...::.....:::x..x..xx.:.x..xxx:...:.....:..:.......x.........:..:..x..xx..........x..:...:.......:.::..:...........:..x::x...x..........::....:.....:.x.-.:...---------------:...:..x:....:.x..-----...:..:.-...xx.::x...xx...:.:.x::..x:...----....xx...:x..:.xxx.:x......xx...-..xx..:.:x:.x:.x...x...:::..:. 20M9D154M1I5M15I18M5D8M1I31M4D32M1I30M 200/298 67.1% 316/94230402 0.0% 36/298 12.1% 131781073 58433482 +3080 chr4 + 190214555 185335317 185335316 185335374 58 CACACACACACACACACACACACACACACACACACACACACAACAAAAACAAAAAACC chr4 - 94230402 56248446 56248445 56248503 37981900 37981899 37981957 58 CAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGATAGAATACC ..x...............:.....x...xxx...x.x..x.......:.:.:..x... 58M 45/58 77.6% 58/94230402 0.0% 0/58 0.0% 129086871 61127684 +9756 chr4 + 190214555 185339367 185339366 185339534 168 TCCCTGTGGCAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTA--GTTTTGACTGCTTTTCCTCTT chr4 - 94230402 53554554 53554553 53554723 40675680 40675679 40675849 170 TCTCTTCTGCAGATTGTTTCTAAGCTGAAGGATGAGATCACTCTGATGGAGAGAGAGCATAACGACCTTCAGTTGCACATTGCGAGAACAGACTGGTGGTGTGAGAATCTTGGCATGTGGAAAGCCTTCATCATCTCAGGCGAGGTATGGTTTTTATGGGTTTTCATCTT ..:..x:x............:...:..........:..x.::..:..:....:...:.::.xx.........:.......x..:.....:..:...........:..:...................:.....:.xxx..x......--.....x.:x.x.....x.... 147M2I21M 132/168 78.6% 170/94230402 0.0% 2/168 1.2% 131784813 58429742 +11608 chr4 + 190214555 185341951 185341950 185342124 174 TATCGATTTTGATGTTTTCCCC---AAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGGTATGAAT chr4 - 94230402 53556011 53556010 53556187 40674216 40674215 40674392 177 TGTTGGCTTCTTTGTTTTCCCCCATAAGGTTTTAGAAGAGAATGGAGAACAAGTGCCCTGTTACTCTGTCCTGGTGAGTTTACAAGAAGTCGGTGGAGCTGAAACTAAGAACTGGACTGTTCCCAGGAAGCTCAGTGAGTTTCAGAACCTACACCGGAAGCTCAGTGAGGTATGAAT .:.:.::..:xx..........---......x:............x..:...x....x.......:....x....:..::..........:..x....:..................x..:.....:.:......:...........::..........:................. 22M3I152M 145/174 83.3% 177/94230402 0.0% 3/174 1.7% 131785940 58428615 +8780 chr4 + 190214555 185346525 185346524 185346659 135 TTCCCCCCACAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGGTAAGCAAG chr4 - 94230402 53556746 53556745 53556880 40673523 40673522 40673657 135 TTTCTCCTACAGTGCTTTCCATCATTAAAGAAAGTTCAGTTGCCTTCGCTCAGCAAGCTGCCCTTCAAATCCATAGACCAGAAGTTCATGGAGAAGTCTAAGAACCAGCTTAATAACTTTCTGCAGGTAAGAAAG ..:.:..:.......x.:..x..x.....:.....:...........x..:...........:........:.....:..:.....:.....:.....x.....:..::.x.....x...:.:........x... 135M 109/135 80.7% 135/94230402 0.0% 0/135 0.0% 131789779 58424776 +11163 chr4 + 190214555 185351433 185351432 185351614 182 TTTCTTCCATAGAATCTGCTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGTTATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCTCCCACCAGGAGGTGAG chr4 - 94230402 53558930 53558929 53559111 40671292 40671291 40671473 182 TTCCTTTCACAGAAATTGCTCTCTGATGAGAGGCTCTGTCAAAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCAGAACACCTCAAAGTGATCGACGTGCAAGGAAAAAAGTCATCTTTTTCACTCCAATCATTTTTAGAGCGACTTCCTTGTGACTGGTTTTCTCATCAGGAGGTAAG ..:...:..:....x:....:..x.....:..:..x.....:...................................x..x:.......:..x...........:..:.....:xxx.........:.x:xx........:..:x........:.:....xx..:..:..:........:.. 182M 144/182 79.1% 182/94230402 0.0% 0/182 0.0% 131792503 58422052 +9082 chr4 + 190214555 185353473 185353472 185353644 172 CTGTATTCCCAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAAGTAAGCT-TCTTTGTTATTATT---TAGTGGTATTTGCTAGTTAAG chr4 - 94230402 53561528 53561527 53561703 40668700 40668699 40668875 176 CTCTGTTCTTAGGAAGAAACTGAAGAGGACAGTGACCTGTCGGACTATGGGGAAGAGGTGGATGGAAAAAGGGACTCTATTGCTGAGCCGTGTTTCATGCTGATTGGGGAGATCTTTGAGCTGCGAGGAAGTAAGCTGTAAATGTGCTTATTTGCTAGTGGAACCTGTTGGCCAAG ..x.:...::....:..:..x..:.................:..:.....x..x..x........:.::.::...x.:x.x.....:..:.........:.............:.....:..x..............-.xxx...xx.....---......x.::..:.:.::... 137M1I14M3I21M 132/172 76.7% 176/94230402 0.0% 4/172 2.3% 131791945 58422610 +6286 chr4 + 190214555 185357651 185357650 185357743 93 TCCTCTGGTTTCTGTTTCAGTGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAGTGAGT chr4 - 94230402 53562748 53562747 53562840 40667563 40667562 40667655 93 TCCTTTTTTTATCATTGCAGTGTTTAAGTGGGTGAGAAAAACATTAATTGCACTAGTACAAGTCACTTTTGGAAGAACCATCAACAAGTAAGT ....:.xx..x:::..x..........:..........:............x..x..x..:............................:... 93M 78/93 83.9% 93/94230402 0.0% 0/93 0.0% 131794903 58419652 +11492 chr4 + 190214555 185361915 185361914 185362110 196 TCTTAAAAGACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGGTGAG chr4 - 94230402 53563404 53563403 53563599 40666804 40666803 40666999 196 TTTTTACAGGCAAATCCGTGACACTGTACACTGGATGTTCAGTGAAGCAATGCTTGTTTACTATATTGGTGTGTTTCGAGATGCTTTTTGGCCAAATGGAAAGTTAGCACCACCACCGACTGCCAAGAGTGATGAACAAAGGCAAGAGACCAAACAGCGAGCACAGCAAAAACTACTTGAAAACATTCCAGGTGAG .:..x.x..:........x.....x..xx:......x........:xx....:.x........:..:::.:.x..:..:....................:.....:........:x.x..x::..::..::.x..:.....x..:..:..x......x.............:..:..................... 196M 152/196 77.6% 196/94230402 0.0% 0/196 0.0% 131798511 58416044 +23436 chr4 + 190214555 185362605 185362604 185363983 1379 TTTCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGTGAGTAAATTAAAGCCCAGGGGGTTTCCTGCTTTAT--TTTTGTCTGTTTCTTCGTT-TGGTCAGAAAAAACATGTGCCCCAGTGGCTGCAGCACTCTCATTCTCAC----------------ATACTAGTCATCTCCCTTGACTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTTGTCCCCCAGGCTGGAGTGCAATGGCACGATCTTGGCTCACTGCAACCTCTGCCTGCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCACTACCATGCCCAGCTAACTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCTGGGATGGTCTCTAACTCCTGACCTCAGGTGATCTGTCTGCCTCAGCCTCCCAAAGT----GCTGG--GATTACAGGCGGGAGCCACCTCGCCCATCCTCCCTTGACTTTTGATATCACATTGCCGCATAACTGGTTGGTTTTCTTATTTCAGCAAAGCCAACTGTTTCCCAGTCATCTCTGATTATAGTTACCAATATTAAATACTGTTTGAGAGTTACTTGTT-TACTGAGATAATTTCAGACCTAAAATTAGACTTTTCTCTTAGATGCAGATATTTATTTTGAATAAACCCTTGGAGAAAAACATTTTTCCACTTTTTTCCTTCTTTGTTGGTTCAGGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTTTGAGACTACACAAATAAACCACCAGAAAAATGTCTGTGT--AATAATAGACATGAAAC--ATTTTCCTCTTTTCCACAGAGGGCTTAACTGAGAACCGTATTGATTTTTA---TTTTAGTTACCTCCCTCTAG------TTTTATGTGAAATTAGTAGAATCAGGGAGGACGGGACTTATGCTGTGGTAGGCAACAGAAAAAAACTT-------CTATTGATTTTAATTTA---------ATATGAATACTTTAAAGATCAACATACCGATTGAAATACAAATGTTAATATGTG-----AGAACCTAGGAAGTATTTTAAATATTTATGAAAATA--TTTTGTTTTAA--AATGAACT-ATGAATATTGTACAGT--TAATTTCCTCACTGAGGACTGTGAACATTCTTATATTATTTCATGTATATTGAAGAA-CATTGTTATGCAATGCTTTGTGTAAAGTTATTGTGAAGATTTTATTGTCTTTATTTTTACCAAAGATTTCCCATAGTTTG-AGCATTCA-AAGCAATAAAATATAAAAATGAATCACAGTGCTCTATGAT chr4 - 94230402 53564755 53564754 53565963 40664440 40664439 40665648 1209 TTGCAGATACTCTGCAGAGCCTCGTTGGACAGCAAAACGCCCGCCATGGTGTAGTGAAAGTGTTCAATGCGCTGCAAGAAAGAAAGGCCAACAAGCATCTGCTCTATGTGAGTAACTAGAAA---AGTGGGGTTTTAATTTTAGAATCTTCTTAATTGCTGAGTTCCACTTAGAA-----TTGAAGCCCAGGGTGTGTAGT-------TTTGCACATGTAAGAGTAGCATGATACTAATCTCTGCAGGTAACTTCTTTGTTTTT-----------GAACGAAGT---------------CAGA---------AAAAACATATTCATTACTCA---------------AGTGATTTCAAATGA---------------------------TGAAATAAAAAGC--------------------------TGTTTATACAGTA-----------TTGC--TTTTGCCTGCAAGAGTCTCCACACC---ATCCAAGTTG----------CCCAACTTTATAAGGTATGCACTGATTTGTTATAGCTGAGAAGAAGC----------------------AGACACTGCATTGC-------TTGGAGAATTCGAGGCTTTCAGAACAG-CAGTTGCATGAAAG------ATGAGCAGAAGGACC----TTATATGCTCCTC-----TTACCCGTGATGTTCTGAACATATCAGA---AAGGTTAAA--------------AGGAACACTAATTTGGCAT----CCGTA--------------TTCACTTTATATCTTCTCTGTT-TTTCAGGTTTTGCTGGAACTGCTGCTAACAGAACTGTGTCCTGAGCTACGAGCTCATTTAGAGCAGCTTAATGCCACTTAGGTTTGGATCTGCACAAGTGGACCACTAGAGAAATGTCTATGTCCAGTAATAGACATTAAACTTATTTTCCTCTTTTCCATAGAGGG-----CTGAGGACTATGATTATTTTTAGGGTTTTTCTTTTTCCTCTCGAGATTTTTTTTTTTGTGAAGTAAACATACTT-----GAAAAGATCTGATGCTGTAGTAGGGTAGACAAAACAATGTTGTATAGTTGCCAATTTTTATTTAAATTGTTCTATTTGACTACTCTTCTGTTTCAAATATAGATTGAAAAATAAATGTTCATATAAGCTCAAAGAAACCAGAAACTATTTTAAACATTTATGAAAAGAAGTTTTGCTTATAGTGGTAAACTAATGAATGTTGTACAGTTCTAATCTCCTCGCTGAGGA-TCTGAGCATTCC----TTTTTTCTTGTGCATTGAAAAAGCCTTGTTGTGCAATATTACATGTAAAGCTATTGTGAAAATTTTATCAATTTTGTTTTTACCAAAGACTTCCTGTAGTTTGAAGCACTTGTAAGCAATAAATAACAAAATTCAATTTCAGTACTTGATGAT ..x......:x..x........:..............:........:...:..:.:...:.:........:..........x..::...............:.x...........x.x:..:---..x...x..::x::....x--.:..x.:x:..x..xx...-::x.:....-----x..x:x.....x.xx..:..:-------..:x...----------------......:..x::x.xxx.:....:...x.....-----------::..::...---------------...:---------..x::..::x..x.x:....---------------:x..:x.....:...---------------------------..::..x.x.:..--------------------------...x.x.x:....-----------.:..--.x...x...x:.x:.....:.xx:.---.:.:x..x..----------.:..:.:.:x:..:..----:...:--x:...:..x:.:..:xx.x.----------------------x..:.:::......-------:...xx::..:xxxxx......x.x..-..::..:x.xxx..------x...x:.x.:xx...----...x..:..x:.:-----....::..x-.::.xx..xx..x.....---..::...:.--------------:x::.:.:.x....x.x..----..x.:--------------.:......x.x:.....:....-x......:x:..x...............:x.................:x...:.........x..:.....x..::x::.:.....::x..:.....:.::.....:...:........:...--.:..........x....--................:......-----.....:..::.:x.x.......---....xx..x:::.:...x..------....x......:.x.::.x.x.:-----.:.x:.:x..x.......:.....xx.x.x....x..:x.-------:.::::.....x.....---------..x...x....:.xxx.x.:x.x...:x........x.:.......x....:x.-----....x.:..:..x.........:...........x.--.....:..xx.--::.:....-......:.........--....:.....:.......-.x...:.....:----..x....x...::......:..-.x.....:......::.x::.......:.........:.......::x:...:.............:....::.......-....:.::-..........xx.:....x.x...:x....:..:x..... 122M3D19M2I19M1I9M5D21M7D7M16I33M11D9M15D4M9D20M15D15M27D13M26D13M11D4M2D25M3D10M10D16M4I5M2I20M22D14M7D27M1D14M6D15M4D13M5D9M1I18M3D9M14D19M4D5M14D22M1D123M2I17M2I23M5D22M3I20M6I23M5D40M7I17M9I54M5I36M2I11M2I8M1I16M2I18M1D12M4D22M1I80M1I8M1I40M 803/1139 70.5% 1209/94230402 0.0% 310/1139 27.2% 131797850 58416705 +3190 chr4 + 190214555 185367283 185367282 185367339 57 TAATTGTTTGGGTCTTTCTTCTTTTTTTTTTTTTCTTTTTTGATTCATTTTTAAGAA chr4 - 94230402 59946262 59946261 59946318 34284085 34284084 34284141 57 TGATTCTGTGATTTCTTCCTCTTCTTTTTTTTTTTTTTTTTGACTCATCTGTAGGAA .:...x.x..:x.::...:....:..........:........:....:.x..:... 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 125421021 64793534 +3342 chr4 + 190214555 185368869 185368868 185368951 83 CTGCAGCCTCCTCCTTGCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTATGGACATGCGTTACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCACTGTG ..:.....:xxxx...x::........:.x...x..x.x........::.:.........:....:--..:...:::..::.. 66M2D15M 56/81 69.1% 81/94230402 0.0% 2/81 2.5% 167171743 23042812 +12147 chr4 + 190214555 185372850 185372849 185373093 244 ATTCACCTTTTGGAAAATGCAACACACTTTGTAAAAAATTTCATCTTATAGTAATACTCCACGAGATTCCCTTGAGCATAGACGTTTCCGCGTTCTGCTGCTTCTCTTAAGCACTGCAGGGCAGCTTCCGTATCCTGCCGGATGCCTTGTCCATACAAGTACATGAGCCCAAGTGCACCCTGGGACTCCAGATTCCCATTGCCACATGCTTCGGAATGCCAGTAAAATGCCTAAG--AAAAGCACA chr4 - 94230402 53570009 53570008 53570254 40660149 40660148 40660394 246 ACTGACCTTCTGGCTATGGCAACAGCTGTTGAGAAGAACTTTCTATTGTAATAATATTCCACAAGGTGGCCTTGAGCGTAGATGTTTCCTCTTTCTGCTGCAGCTTTCAAGCACTCCAGAGAGGCCTTAGTGTTCCGACGTACACCTTGTCCATAGAGATACATAACACCAAGTGCACCCTGTGATTCCAGGCTTCCGTTGCCACATGCTTCTGAATGCCAGAAAAAGGCCTAAGCAAGAGGCACA .:.x.....:...xx.xx......xx:x...x:..:..:..:x.x..:..:.....:.....:..:.xx........:....:......x.x.........xx..:.:.......x...:.x:..:.:x..:.:.:.x..x.::...........x.::.....:.xx..............x..:.....::.:..:..............x.........x....x.......--.:.:..... 235M2I9M 180/244 73.8% 246/94230402 0.0% 2/244 0.8% 131802841 58411714 +12451 chr4 + 190214555 185374123 185374122 185374467 345 AGGGAACGTTACCTTTTCTAACTCCTTGGGCTCCTTGGTTGAGTAATACAGCCCGAGCATACTTTGAGCCTTCACACTAGCTTTGGGATTTCCATTGTCTGCTGCGATAAGCCACAGTCT---ACAAGAGAAAGTGAGGCATGTTATTCTCGGTT---TCAGCATTTCCT-----TCAAACCTAATCTTGTTCTCAGGTAGGATTACCTTTCAGCTTCCTCATTTGATCGTTTAACACCTTTTCCTTCATAATAAGCTCTTCCGAGGTTGTAAGCAGCTGCAAATTTTAAGTGTCTTGCTTTGGGACATGGAGAATCAAGAATTTTCTTCATATAGTCCACCCCTTTCTCCTTCGA chr4 - 94230402 53570740 53570739 53571089 40659314 40659313 40659663 350 AGTGGGCTTTACCTTCTTCAGATCCTTTAGATCTGGCATGGAATAAAGCATTCCTAAAGTACTCTGGGCCTTTACGCTTGCTTTTGGATTCCCGTTATCTGCAGCAATAAGCCACAACCTGAGAAAACAGAGACAAAGAAAGTTCAGTAACAGTTATCTCAGCATCTTCAGCTCATCAGGAGAATTACTGTCCGCA------ATCACCTTTCAGCCTCTTCAGTTGAATGCTTAACACCGTATCCTTCATAATGTGCTCTGCCAAGGTTGTATGCAGCTGCAAACCTTAAGTGTCTGGCTGCTGGGGAATCAGAGCTGAGTATCTTCTTCATGTATTCCACTCCCTTCTCCTACAA ..x.::.x.......:.::.:x.....x:.x..:xxx:.x..:...x:..x:..x.:x:....:..:.....:..:..x.....x.....:..:..:.....x..:..........::..---.x..x...:.xx:..:x.xx.:.x.xx.:...---.......:.:.x-----...::xxx.x.x:...:.x..------..:..........:..:...x....x:.:........x.x...........:x.....x..:........x...........::..........x...x:x..:x.xxx...::::..x..:........:..x.....:..:.......x.:. 120M3I32M3I12M5I21M6D154M 234/339 69.0% 350/94230402 0.0% 17/339 5.0% 131803383 58411172 +3634 chr4 + 190214555 185375450 185375449 185375522 73 CGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAATATATATATATATATATATATATATATGTATATA chr4 - 94230402 86407063 86407062 86407139 7823264 7823263 7823340 77 CACTTCAAAGTAAAAAAAAAAAAAAGAACAAAGAATCTTAAGATCTTCACAAATATATGTGTATATATATGTATGTA .:::.....:x..............:..x...:..----..:..x.x:.:.x......:.:.............:.. 35M4I38M 56/73 76.7% 77/94230402 0.0% 4/73 5.5% 98968387 91246168 +3034 chr4 + 190214555 185375469 185375468 185375531 63 AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATGTATATATATATGTAT chr4 - 94230402 25493116 25493115 25493178 68737225 68737224 68737287 63 AAAACAAAACACAAACAGCATATTTATTTACCCATACATACATATATGTACATATACAGGTAT ....x....x.x...x.:x....x...x..:x:...:...:.........:.....:.x.... 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 159882353 30332202 +3019 chr4 + 190214555 185375471 185375470 185375518 48 AAAAAAAAAAAAAAAAAATATATATATATATATATATA---TATATATGTA chr4 - 94230402 69437739 69437738 69437789 24792614 24792613 24792664 51 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTA .........x........:x..................---..:...x... 38M3I10M 43/48 89.6% 51/94230402 0.0% 3/48 6.2% 115937732 74276823 +6366 chr4 + 190214555 185375607 185375606 185375732 126 ACTTACAGCGTCTAGAGTGGTCCCCAGCCCATCATAGTACATCACTCCTAGCTGGTAAGTTGCTTGATGGTCTTTCTCCTTGATTTCTTCAAACTGTTCTAATGCTTCTTCATACCATCCCTAGAA chr4 - 94230402 53572517 53572516 53572642 40657761 40657760 40657886 126 ACTCACAGGGTCCTTATCAGTGCCTAGTCCATCGTAGTGCATTACACCAAGCTGATACAGTGCCTGAAAATCTGTATCCTTGCTTTTCTCAAACTGTACTAATGCTTCTTCATACCTCCCCTGGGA ...:....x...:xx.x::..x..:..:.....:....:...:..x..x.....:..x:x...:...x::...x.x......x...::.........x..................x:....:.:. 126M 92/126 73.0% 126/94230402 0.0% 0/126 0.0% 131803090 58411465 +3588 chr4 + 190214555 185393009 185393008 185393087 79 CTGCAACCTCTGCTTCCTGGGTTCAAGTGATTCTCCCACCTCAGCCTCTCAAGTAGCTGGCATTACAGGCACGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx:x:.:.............x...x.xx:x........:............x.:....--.::....... 67M2D10M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 167195883 23018672 +6477 chr4 + 190214555 185400391 185400390 185400502 112 TTTAAATCATATTTGGTCGCTGAGGAAGACATAAGTTATAGTATGCATCCTTGTTCCAAAAATCTGGGCCCTTCCATCCGCACCAGCCCTGGATAGAGAAGACGGGAAAGGA chr4 - 94230402 53576401 53576400 53576509 40653894 40653893 40654002 109 TTTAAATAGTTTTTGGTCGTTGAGGTAGACACAGGTTATAATAGGCATCCTTGCTCCAGAAGTCTGGGCCCTTCCAGGCACACCAGCCCTGGCCAAGAAAAA---GAAAAGA .......x:.x........:.....x.....:.:......:..x.........:....:..:..............xx.:............x:.:::..:.---....:.. 102M3D7M 87/109 79.8% 109/94230402 0.0% 3/109 2.8% 131823990 58390565 +9554 chr4 + 190214555 185403479 185403478 185403632 154 TAAATGGATACTTACCTTTTCCAAAATAACTTGCAGGTCTTCAGCACCGGTATAATGTGGATCTAGAATCAGAAACTTTATCTGCCCTGTAATCTCATTCCATGCAACTCCTAGTATTGTGTGGGCCAAAACTCCTCCCCCT---ATAGAAGAAAAA chr4 - 94230402 53577230 53577229 53577386 40653017 40653016 40653173 157 TACATGAAGTCTCACCTTGTCCAAAATAACATGCAGGTCTTCTCCTCCAGTGTAATGTGGGTCTAGAATCAAATATTTTATTTGCCCTGTCATTTCATTCCACGCCACTCCTAGTATCGTGTGAGCCAAAACACCTCCACCTCACACAGGAGAAAAA ..x...:.xx..:.....x...........x...........xx.x..:..:........:..........:.x.:.....:........x..:........:..x...........:.....:........x.....x...---.:..:....... 142M3I12M 127/154 82.5% 157/94230402 0.0% 3/154 1.9% 131826249 58388306 +5874 chr4 + 190214555 185405770 185405769 185405868 99 AACAGCTTACCGATCATAACTGGAGTTCCTTCACTTTGGAAATGATTAGCCAGTTCCCGTCCTTGAGAGGCAATTTCTGAACCTTGGCTAGA-AAGAAAC chr4 - 94230402 53577994 53577993 53578093 40652310 40652309 40652409 100 AACTACTCACCAATCATAACTGGAGTTCCTTCAGTCTTGAAATGATTAGCAAGTTCTCTTCCCTGCAAAGCGAGTTCAGAACCCTGGCTAGGTAAGAAAC ...x:..:...:.....................x.:.x............x.....:.x...:..x:.:..:.x...x.....:.......:-....... 92M1I7M 80/99 80.8% 100/94230402 0.0% 1/99 1.0% 131827776 58386779 +3000 chr4 + 190214555 185406982 185406981 185407037 56 AATAGAAAATGTATTTTATTTGTTTTTTGGCTTTTCTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 25291585 25291584 25291640 68938763 68938762 68938818 56 AAGAGGAAATTCATTGTTTCTGTTTTTCGGTTTCTTTTTTTTCTGTTTCTTTTTTT ..x..:....x:...x.x.:.......:..:..:.:......:.x...:....... 56M 42/56 75.0% 56/94230402 0.0% 0/56 0.0% 160115397 30099158 +8400 chr4 + 190214555 185407909 185407908 185408063 155 TTATCTAATTTCTTAAAGTGTG------CTTACCTGACAAACAGGATTTTTGACGTTATACCGATCAATTGGTTTAGTACCAGCTGCACCTCAATAGATCCAATCCATTGCCGCGATCCGACAAATGTTGCTGGTTTGTCCCCGGCATCGACTAGAGCCTT chr4 - 94230402 53580014 53580013 53580174 40650229 40650228 40650389 161 TTACCGAACTACTGAAAACATATGGATTCTTACCTGACAAATAATATTTTTGACGTTATGCCAAAGAGTTGATTCAAAACAAGCTGCACCTCGATTGAACCAATCCACTGCCGTGACCCAACAAAAGCTGCAGGTTTGTCTCCAGCATCAACCAGGGCCTT ...:.x..:.x..x...:::.:------.............:.:x..............:..:.xx.:...:..:.:x..x...........:..x..x........:.....:..:..:.....x.:...x........:..:.....:..:..:..... 22M6I133M 118/155 76.1% 161/94230402 0.0% 6/155 3.9% 131827895 58386660 +12148 chr4 + 190214555 185408263 185408262 185408558 296 TTCTGTACCTGCTGAATTTCTCTGTGTGTTGGAATGGACCTCTCTGTGTATCCCTGATGTTTGAACCAAGAGCAGATAGTCTGCAGAGATCGATAAGCACAGCCCCAGCCATTGTCATCTATGCGATCCTGCATATAATGATGATAGCCATATATGCCCTGGACCACATAAATCTATATACAGAGAAGAAACACAGTAAAAT---ATTAACTTAGGATAGAAGTACATATTCTATATATGCTCCCG--AATTATGTTTAATGTTCTTAGAGTTAGACTGTTACTTTAGTTCCTTATAAAAA chr4 - 94230402 53581782 53581781 53582067 40648336 40648335 40648621 286 TTCTGTACCTGCTGAATTTCCTTGTGTGTTGGTATAGGTGCATCAACGTAACCTTGCTGCTTGAACCAAGAACAGATGGTCTGCAAAGACCGATAAGCGCAGCCCCAGCCGCTGTCATCAGTGCGATCCTGCATATAGTGGTGGTAACTGTATGTGCCATGGACTAAATAAACCTGTACAGAGACAGATAATACAAACAAATCTGATCACGCTAGGATCAATTTTCAGAGGACGTATATATTTCTGTCACTTCTGTT------------AGTTAGGGAGTTA---TAAATCTTTAGAAGAA ....................::..........x..:.::x:x..x::...x..:..x..:...........:.....:.......:...:........:...........::.......x:................:..:..:..:.::...:....x.....:.x.....:..:..:.x...x.::x..:...:xx....---..:.xx:......x:.xx.x..x.xxx::.....::.:.:.--.x..x....------------......:xx....---..:x..:...x..:.. 202M3I41M2I9M12D13M3D16M 205/281 73.0% 286/94230402 0.0% 20/281 7.1% 131826481 58388074 +9252 chr4 + 190214555 185413716 185413715 185413922 207 TTAAACTCACCATACCAGTCTCCATGTTAGGTGGATTAAGGTAAGTATGTGGATTTCTAATGTAACCATCTTTGTATGGCTCATCTGGAAAGTGATAAGCATTAGACCTTTTGAAATAGGGTCTGTCGTGAGGCAGATTGAAAAGATCATGTAACTCCTAAA-ATAAATCAGAATCAACAGAAAAAGAAAAAAT---GTTGGTGATTTAGA chr4 - 94230402 53582419 53582418 53582629 40647774 40647773 40647984 211 TTAAACTTACCACACCAGACTCAGGACCAGGTGAATTAAGATGTAAATGGGGATTTCTGAGATAGCCATCTTTATATGGTTCATCTGGAAAATGGTAAGCATTTGCTCTCTTGAAATACGGTCTGTCGCACGGCAGGTTGAACAACCCATGCAATTCCTACATGCCAGTTAGGATAAAAGTAAAGAGCACAACTCAAGTTTGGGATTAAAA .......:....:.....x...x:x:::.....:......:.:x:x...x........:.x:..:........:.....:...........:..:........x.x:..:........x.........::x.....:.....x.:x:....:..:.....x.-::x.:.:..:..x..x:x...:..x.x..x.---...x.x....x.:. 162M1I31M3I14M 149/207 72.0% 211/94230402 0.0% 4/207 1.9% 131831297 58383258 +15036 chr4 + 190214555 185415089 185415088 185415890 802 ATAATTAAATACAAAATGAATGATAG------TCATTATTGTTTTTTCTAAGAATAGATGAACTGGTTTTACCTTCCTATAGGCCTGCAGCTGGCCATCTGGTATTCCTGAAGGATATGAAATTGTTACAAGATTTTTTTTCCCTGGTAATAAAAAGTGCAGTGGTTCAGGGACCACAATAGATGTTCCTTTCATATATTTCAAAATACATTTTTCCATGTCAGTTAGTTGATTATGAATTGCATCAACCAGGAGTTTACGAACTCTGTG-------GGGGGAAATATATAAGTGTATTAACAAAAGTTATAGT-GACTA-----------CAATAAAGAA------AAGTACA--------------GAGCTAATATATCCT--------------TAGTATAGTAAAAAACTTGATTGGACCAGGTTTGCTAAAGG---AAGTCTGAATTA------TACATTATAAA---AGAAACT--------GTGTATTTGCTCTTTGTGGATAAAGGGAAATCCTCCAGGTTTTAGCATGCTACCCTACTTCCTCCAA-ATAACCATTTAATTAATAGATGGCTCTT---AGGTTAATAATAAACAAGGAGAAAATCACACCTTAGGTATACCTACAG---------GATATAC---AAACATGGGTTTGGGGAAGGGCCCTCATTCAAATGTGGCAGTGGTACTAT----AAAAATACTTACTTTCCCCATGTTTCTTCTGGAGCAACAGATATAACTGCATCGACAGGTAAAGTCATATTAACATAATGGTGTCCTCCGCTTTCCCTTTCAATGATGGGCGTTACAGCTGCCAGGGAGGTTGACATTTCCAGCATAAGATCTATATTTACTATTTGATGCTATATAG---ATAAACAGTAATAGT chr4 - 94230402 53583900 53583899 53584764 40645639 40645638 40646503 865 ATAATAACAGTAAAAATAAAAGTCAGGTTATCTTAGTATTTGTTGTACTCCGGCTAAAGGGAAATGCTTTACCTTTCTGTAACTTTCCAGTTGATCATCTGAAATACCTGTAGGGTATGAAATGGTTACAAGGTGATTTTTTCCCGGTAACATGAAGTGAAACTGTTCTGGTACCACAATTGATGTTCCCTTCATGTATTTCATGATGCATCTTTCCATATCGGTTAATTGCTTGTGAATTGCTTTCACCAGGAGATTTTGCACCCTGTGAATTAGAAGGGACAATACTTAACT---CTCAGAACAGCGATGGCGGACTGCTTTCATAGCTCACTTAAGCAGTACTCATGCACATTTGCACCTGCTCTGAACTTCTCACTCCTCCAATCCACTCCCACAGAGAAGGATGAAACTTCAGCGTGC----TTTGCTCAAAGGGCAAAACTGTTCCAAGAAACTGCATCAGAAGCACAGAAACTATTCTCTAGTGATTCTGCCCTCTG-----AAATGCAGGTACCCCAG---------------CCTGCTGCCAGAAACACAACCATT------ATGAGTGTCTGCTGAAATGCAAGTAACATATATG------ACTCTCTCTCatatatatatatagtaaagatatgatatatataatacatatattatacattatattattatatatatgttttatatatatTATTCAGGATAATACTTACTTTCCCCACGTTTCATCTGGAGAAACAGATACAACAACATCAACTGGCAATGTCATATTAATGTAGTGGTGCTCCTTATTTTCTCTTTCGATGACTGGAGCCAAAGCATCTGCTGAAGATGTCATCTCTAACATGAGGTCAATGTTGATTACCTGCGGCTGCACAGAATAAAGACACCAACAGT .....x.x.xxx.....:..x.x:..------.:.x....xx..x.x..xx.:x..:.x.:.xxx.:........:..:..:x::.x...:..::......:x..x....x...:........x........:.xx.....:..:.....:.x:.....x.::x....x..x........x........:.....:.......x:..:...:.......:..:....:...x..:........x.:x........x..x:.x..:.....-------:...:x....:x...x.---:.x.x..x..:x..:.:-....:-----------..x.x...x.------.x.:...--------------..:..xx.xxx....--------------:..x:x..x.x:......x.x:.x:.----......x..:.---..:x...xx::.------.:...:.x..:---.......--------...xx.:...:..:..-----...x.x.::.x.:....---------------...:..x..xxx..-.:.......------..:::..x..x:.---.x.:x.:...:.x.:.x.------.::x:x:..:.x:....:x..:..---------......:---.x....:x:..xx:x:xx:x:::x.:..x:.x....xx:.xxx:..:...----:.x.................:.....x.......x........:...x:....:..x..:..x..........::..:.....::.:::::....:.....:....:x..x.::.x...xx.::xx..:.x..x...:..:.:...:..:..x..:..x.:..::..xx...::.:..---.x.:...x:..:... 26M6I238M7I17M3D17M1I5M11I10M6I7M14I15M14I26M4D11M3I12M6I11M3I7M8I16M5D17M15D14M1I9M6D13M3I18M6D24M9I7M3I50M4I178M3I15M 504/763 66.1% 865/94230402 0.0% 141/763 18.5% 131831189 58383366 +12248 chr4 + 190214555 185418438 185418437 185418815 378 TACCATGTCTGATAACTTTTTGTCCTTCTTTCTCATGAATTTTCTTTTTATATCTTCTTCTGGCTCAAATCTAAATTTTTAATACACAGA----CATTTATAATATGAAATGA---TGTTTTGAAAACATTTCTAGAAATC-------TTCAAACATACTCACTGAATAAAGCGCAGTATGTTCTTACAAGCAGAAGCATCAGTCAGTTCTCCAGGAATGGTGTTTATGTCACTGCTAGGCCATATATACACTGAACTGTGGCAAATTCTGAACACAAGGGCGTTTGAAGACAGCTTAGTTGACAGGTCACTCAACACATGTTTCAGTGCCTTCTTGAGAAAAATTTCTAAATTAAAAGAATATAAATAGAAGTTAAGAAAAACAAATTTTT chr4 - 94230402 53585026 53585025 53585409 40644994 40644993 40645377 384 TACCATGTCTTGAAGCTTCTTATCCTTTTTTTTGCCAAGCTTTCGTCGGGTCTCATCATCTTGATCAAAGCTGAAGTATCAACAGAAAGAGCAATTTCTAGAATATGCAATTAATCCATAACAAAATCATCTTTCTGTTTCGTTTTGTTTTTAATATACTCACTGTATAAATCGTTTTATCTCCTTACAAGCAGAATCATCAGTCAGCTCT---GGAACGGTGTTGATACCGTTGTTGGGCCACACATACACTGAACTGTTGCAAATTCTTAATACAAGAACATCTGAGGACAGCTTATTTGCAAGATCACTGAAAACGTACTTTAATGCACTTTTTGCTGATGCTTCTGAAACACA-----GTAAGTAGAAAATTAACTTAAAAAATTTCT ..........x:x.:...:..:.....:...:.xx::.::....x.:xx:.x..x..x...x.x.....x..:..x.x.:..:.x.x...----:x.:..x......x...x.---::.xx::...x...:.:.xx:xx..-------..:x..:..........x.....x..:xx...x.:.............x..........:...---....:......x..::.::..:.:.....:.:..............x.........x..:.....::.:.:...:.........x...xx..:.....x..x..:.::..:.:...x:.:..x:xx:.x::....:..x:.x.-----:...:.....:x.x.:xxx..x......:. 90M4I19M3I25M7I63M3D143M5D30M 251/370 67.8% 384/94230402 0.0% 22/370 5.9% 131833412 58381143 +6176 chr4 + 190214555 185422450 185422449 185422587 138 TTTTCTAATAAAAAAGAATTTTTCAGAAGACCTACCATTAGGAGTAGCTAGCTGAAAAGCCAAATCAAGGCCTCCTCTTATTCTGAAGAGTATATCCATACTTTCTGAAATCACCTAGAACAAATAAAGATAAAGACA chr4 - 94230402 53586134 53586133 53586268 40644135 40644134 40644269 135 TTTTTTAATCTATGATAGCCTTACAGA---CACACCATCAGTAGTTGCTAGCTGAAACGCCAAATCCAAGCCGCCTCTTATTCTAAAGAGTATGTCCATAGCTTCCAGAATTACCTAGGGAGGAAAAAAAAGAAGTCA ....:....xx.x:.x.:::..x....---.x:.....:..x...x...........x........x.:...x...........:........:......x:...:::...:......::x::.x...:.x:...x.. 27M3D108M 98/135 72.6% 135/94230402 0.0% 3/135 2.2% 131836316 58378239 +3012 chr4 + 190214555 185423726 185423725 185423830 105 ATATATCACAAATGACATGTATCATTGTTTGTGTACACATATATACACACACAGATACACATATTCATACATATATACATACATATATACACACACACACACACG chr4 - 94230402 27943521 27943520 27943625 66286778 66286777 66286882 105 ATATGGAACAAATAAAATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACACG ....:xx......:.x..:x::xxx:::.x..........::.:.x:::::......::..:..x:..::::x:...:..x..x..:.x....:...:x...... 105M 61/105 58.1% 105/94230402 0.0% 0/105 0.0% 157480205 32734350 +3364 chr4 + 190214555 185423761 185423760 185423857 97 CACATATATACACACACAGATACACATATTCATACATATATACATACATATATACACACACACACACACGAGAGAAAGAGACAGGAAGGGAGAAAGA chr4 - 94230402 8395787 8395786 8395874 85834529 85834528 85834616 88 CATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACAC---------AGACACAAATGAATAAAAA ..::.:.:..::::::..x.x...::....:.:.:..:...:.x.....xx..................---------.....x:..x.:.x...:. 69M9D19M 60/88 68.2% 88/94230402 0.0% 9/88 10.2% 177027974 13186581 +3193 chr4 + 190214555 185426865 185426864 185426918 54 TCTACTAAAAATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAG chr4 - 94230402 30096480 30096479 30096533 64133870 64133869 64133923 54 TCTTCCAAAAATGCCAACAGAGAGAAAAAAAAAAAAAAAACACAAAACAAACAG ...x.:......:....x.:.:.:................x.x....x...:.. 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 155330385 34884170 +6421 chr4 + 190214555 185444947 185444946 185445135 189 CTCGTTTTTCTTCGCAGCCTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACCCTTATGTGGCTAAA-----TTGGCAAATATTTCTGGCAAAGATGATAA-GATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGAAGGTGGG chr4 - 94230402 53587827 53587826 53588020 40642383 40642382 40642576 194 CTTTTTTTTTCTTTCAGT-TGAGAGCATGAAAGGAGACACACGTGATCCTCATCCAGGCCATCCTGCTGACCCTTATGTAATTAAGAAAACTTGGCTGTCCCATCCAGTAAAGAAGAAAACTGTTCTCCATCCTCCTCCTCAACCAAAAAGCAGATCTATTACAAGCATCACGACTTTAAATGTCACAAGGTAAG ..:x.....::.:x...:-..:x:.x.....:.x..:x...:x.......:.:...xxx...:................:::...:-----.....x:x:x:x..::.:.....x..x..-x:..:....:..x..xxx.x:.............:.x:..:x...:..x.:......:.......x.....::. 18M1D67M5I29M1I74M 127/188 67.6% 194/94230402 0.0% 7/188 3.7% 131857120 58357435 +3056 chr4 + 190214555 185477855 185477854 185477938 84 TGGATAGAGCTAGGGAATGTCTGAATGCATATGCATGAGTATATGTGTGTATGTATGTGTATGTATTATGTATATGTACATACA chr4 - 94230402 61485357 61485356 61485440 32744963 32744962 32745046 84 TGGTTGCATCTACAGAATATACATACATACACACATGCACACCTGTGTGTATGTATGTATTTATATTCTGTAGATGTATAGATA ...x.:x.x...x:....:.x::x.:::.:.::....x::.:x...............:.x.:....x....x.....:.x.:. 84M 54/84 64.3% 84/94230402 0.0% 0/84 0.0% 123992498 66222057 +3162 chr4 + 190214555 185482213 185482212 185482286 74 ATCAGTTTCAGTGTGAAATATCAGCTCTCTTGGGATCCGCAGGAATAGGAATCCAGCTCTGTGAACGTTGCAGC chr4 - 94230402 26366930 26366929 26367003 67863400 67863399 67863473 74 ATTAACTTCAGTGAGAAAGATCAGCTCTTTGGGCTGTCACAGTAGTAGGAATTCACCTATGTGGGGACTGCTGC ..:.::.......x....x.........:.x..xxx:.:...x.:.......:..x..x....::x::...x.. 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 159115283 31099272 +3252 chr4 + 190214555 185489991 185489990 185490057 67 CTGCAACCTTGAACTCCTGAGCTCAAGCAATACTCCCACCTCAGCCTCCCAAGTAGCTGGAACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:x:.:..:...:.:.....::x.x.x.xx:x........::.................. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 167292865 22921690 +3014 chr4 + 190214555 185528044 185528043 185528093 50 ACCTCCTCCTCTCACCAAAAACAAAACAAAACAAACAAACAAACAAACAA chr4 - 94230402 31694626 31694625 31694675 62535728 62535727 62535777 50 ATCTCCTTCCACCACCAAAACAAAACTAAAACAAACAAACAAAAAAACAA .:.....:.:x:........xx...x:................x...... 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 153833418 36381137 +3327 chr4 + 190214555 185528044 185528043 185528095 52 ACCTCCTCCTCTCACCAAAAACAAAACAAAACAAACAAACAAACAAACAAAA chr4 - 94230402 31704331 31704330 31704382 62526021 62526020 62526072 52 ACCTCCTTCCACCACCAAAACAAAACTAAAACAAACAAACAAACAAAAAAAA .......:.:x:........xx...x:....................x.... 52M 43/52 82.7% 52/94230402 0.0% 0/52 0.0% 153823713 36390842 +3003 chr4 + 190214555 185528060 185528059 185528095 36 AAAAACAAAACAAAACAAACAAACAAACAAACAAAA chr4 - 94230402 38540320 38540319 38540355 55690048 55690047 55690083 36 AAAAACAAAACAAAACAAACAAGCAAACAAAAAAAA ......................:........x.... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 146987740 43226815 +3214 chr4 + 190214555 185528060 185528059 185528120 61 AAAAACAAAACAAAACA-AACAAACAAACAAACAAAACACACAAGCAGGTGTATCTCAACAT chr4 - 94230402 24629529 24629528 24629590 69600813 69600812 69600874 62 AAAAAAAAAACCAAACGGAACAAACAAACAAAAAAAACACAAAATCAGAGGTTTTGCAACAT .....x.....x....:-..............x........x..x...:x..x.:x...... 17M1I44M 50/61 82.0% 62/94230402 0.0% 1/61 1.6% 160898531 29316024 +3011 chr4 + 190214555 185528061 185528060 185528097 37 AAAACAAAACAAAACAAACAAACAAACAAACAAAACA chr4 - 94230402 81661610 81661609 81661646 12568757 12568756 12568793 37 AAAAAAAAACAAAACAAACAAACAAACAAAAAAAACA ....x.........................x...... 37M 35/37 94.6% 37/94230402 0.0% 0/37 0.0% 103866451 86348104 +3002 chr4 + 190214555 185541843 185541842 185541877 35 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGA chr4 - 94230402 81629064 81629063 81629098 12601305 12601304 12601339 35 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGA ..........:.......x................ 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 103912779 86301776 +3128 chr4 + 190214555 185541843 185541842 185541882 40 TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x................x::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 166559528 23655027 +3091 chr4 + 190214555 185541845 185541844 185541880 36 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAG chr4 - 94230402 81629064 81629063 81629099 12601304 12601303 12601339 36 TGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ..........:......................x.. 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 103912781 86301774 +3371 chr4 + 190214555 185541845 185541844 185541887 43 TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAGAGAGAGT chr4 - 94230402 18982315 18982314 18982357 75248046 75248045 75248088 43 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGAT .................................x..::..::. 43M 38/43 88.4% 43/94230402 0.0% 0/43 0.0% 166559530 23655025 +3128 chr4 + 190214555 185541847 185541846 185541886 40 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ................x..............x....::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 166559532 23655023 +3148 chr4 + 190214555 185541942 185541941 185541981 40 TGAGTGTGTGTGTGTGTGAGAGAGAGGGAGAGAGAGACAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..x.......................:.........:x.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 166559627 23654928 +3128 chr4 + 190214555 185542057 185542056 185542096 40 TGTCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x..............x.................::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 166559742 23654813 +3296 chr4 + 190214555 185542059 185542058 185542102 44 TCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982311 18982310 18982354 75248049 75248048 75248092 44 tctctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...x..............x.x...................::.. 44M 39/44 88.6% 44/94230402 0.0% 0/44 0.0% 166559748 23654807 +3162 chr4 + 190214555 185542059 185542058 185542096 38 TCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629062 81629061 81629099 12601304 12601303 12601341 38 TTTGTGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG .:..........:.....x................... 38M 35/38 92.1% 38/94230402 0.0% 0/38 0.0% 103912997 86301558 +3544 chr4 + 190214555 185542059 185542058 185542100 42 TCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982313 18982312 18982354 75248049 75248048 75248090 42 tctGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................x...................::.. 42M 39/42 92.9% 42/94230402 0.0% 0/42 0.0% 166559746 23654809 +3125 chr4 + 190214555 185542061 185542060 185542094 34 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG chr4 - 94230402 81629066 81629065 81629099 12601304 12601303 12601337 34 TGTGTGTGCGTGTGTGAGAGAGAGAGAGAGAGAG ........:......................... 34M 33/34 97.1% 34/94230402 0.0% 0/34 0.0% 103912995 86301560 +3376 chr4 + 190214555 185542061 185542060 185542098 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAG chr4 - 94230402 18982317 18982316 18982354 75248049 75248048 75248086 38 TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ..................................::.. 38M 36/38 94.7% 38/94230402 0.0% 0/38 0.0% 166559744 23654811 +3039 chr4 + 190214555 185575939 185575938 185575986 48 TATTTGTGGCTTCTGTGTGTGAGATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 32550991 32550990 32551038 61679365 61679364 61679412 48 TATTTATGGGTTGTGTGTGTGATTTGTTTTTTTTTTGTTTTTTTTTTT .....:...x..x.........xx.x..........x........... 48M 41/48 85.4% 48/94230402 0.0% 0/48 0.0% 153024948 37189607 +3877 chr4 + 190214555 185646354 185646353 185646461 108 TATATATGTGTGTGCATACACATGTGTATATATGTGTATGTATATACACCTGCATGTGTGTGTGTATATATATATATATAAATACACACACATACACACACACATACA chr4 - 94230402 73121102 73121101 73121209 21109194 21109193 21109301 108 TGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::...::.:.x.........:.::.:.x.x.::.:x...:....::x.:x:.::::.x..:...:.:x:..:..........:.x....x.x.......::..:. 108M 66/108 61.1% 108/94230402 0.0% 0/108 0.0% 112525252 77689303 +3314 chr4 + 190214555 185646361 185646360 185646456 96 GTGTGTGCATACACATGTGTATATATGTGTATGTATATACACCTGCATGTGTGTGTGTATATATATATATATAAATACACACACATACACACACAC chr4 - 94230402 14964794 14964793 14964884 79265519 79265518 79265609 91 GTGCATTTATATAGAGGTGT-----TGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...::.x:...:.x.x....-----....x.:::.x...::::...:....:::::..:...:......:.xxx.:.....::..:.......... 20M5D71M 59/91 64.8% 91/94230402 0.0% 5/91 5.5% 170681567 19532988 +3681 chr4 + 190214555 185646374 185646373 185646465 92 CATGTGTATATATGTGT-ATGTATATACACCTGCATGTGTGTGTGTATATATATATATATAAATACACACACATACACACACACATACACTTG chr4 - 94230402 14964797 14964796 14964889 79265514 79265513 79265606 93 CATTTATATAGAGGTGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGTTG ...x.:....x.x....-:..x.:.:.x.:x..:x..:.....:::.::.:...:......x.xx.........:..........:..xx... 17M1I75M 64/92 69.6% 93/94230402 0.0% 1/92 1.1% 170681577 19532978 +3609 chr4 + 190214555 185646385 185646384 185646459 75 ATGTGTATGTATATACACCTGCATGTGTGTGTGTATATATATATATATAAATACACACACATACACACACACATA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ......:.:.:.:.:..:xx:.....:.x.:::...:...::x..:..x............:.......x...:. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 177250597 12963958 +3085 chr4 + 190214555 185694666 185694665 185694715 50 CTTGAATTTCTTTTTTTTCTTTTTCTTTTTCCTTTTCTTTCTTTTCTTTT chr4 - 94230402 66510356 66510355 66510405 27719998 27719997 27720047 50 CCTCAATCTCTTTTATTTCTCCTTCTTTTTTCTTTTTCCTCTTTTCTTCT .:.x...:......x.....::........:.....:::.........:. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 119184310 71030245 +3524 chr4 + 190214555 185741328 185741327 185741430 103 AATTGCATTAGGAACAGAGGT----CAGGCCCAAGAGCTGCCCTCTCCTCACTTTTCTTTCTTTCTTTTCTTTTTTTTTTGTTTTTTTTTTTTTTTTTGAGGGGGAG chr4 - 94230402 22028014 22028013 22028117 72202286 72202285 72202389 104 AAATGTATTGGGAACAGCTCTTACACAGGCAACAGATTTGCT---TCCTTACAGTTCATCCGCTTTTTCCACTTTTTTTTGTTTTGTTTTGTTTTTTTTGGGGGGGG ..x..:...:.......xxx.----.....xxx...x:...:---....:..xx...x.:.x:.:...:.x:.............x....x.......x:.....:. 21M4I17M3D62M 72/100 72.0% 104/94230402 0.0% 7/100 7.0% 163713314 26501241 +3714 chr4 + 190214555 185743786 185743785 185743974 189 TTCTTCTTATTCCTCTTC---CTCCTCCTTCTTCCTCTTCTTCTATCTTCTTTCCTCCTCCTCCTCCTTCTATTTTCTTTCCTCCTCCTCCTCCTCTTTCTCCTCCTCCTTCTTCTTCTCCTTCTCCTTCTTCTATTTTCTTTC----CTCCTCCTCCTCTTTCTCCTCCTCCTTC-------TTCTCCTTCTCCTTCTTCTT chr4 - 94230402 79478351 79478350 79478546 14751857 14751856 14752052 196 TTTTTTTTAACCATCTCTAAGCTCTTTGGTGTTGCTATTGCAATGTTTCCCTTTTTTGTCTCCCTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCT-------TTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTT ..:..:...x:.x...::---...:.:xx.x..x..x..x:xx.:.:.:.:..::.:x..::...:xx.:.xx:.::.x:::.:.x:....:.:.....:.xx................x.:.-------..x.:....x...:----..:....x........:..:x..x.:..-------....:..x:.xxx...:... 18M3I102M7D14M4I28M7I20M 113/182 62.1% 196/94230402 0.0% 21/182 11.5% 106265435 83949120 +3846 chr4 + 190214555 185743890 185743889 185744039 150 CCTTCTTCTTCTCCTTCTCCTTCTTCTATTTTCTTTCCTCCTCCTCCTCTTTCTCCTCCTCCTTCTTCTCCTTCTCCTTCTTCTTCCTCCCCTCCTCCTCCTCCTGTCCCCCTCACCTTTCCCCTTTCCCTCCTCTCCCATTTCCACTTT chr4 - 94230402 79478400 79478399 79478547 14751856 14751855 14752003 148 CCTTTTTTGTCTCC--CTTAGTTTTGCTCTTGCTTTTCATCTCCCCTTCTTTTTGATCCTCCTTCTTCTTCTGCCTTTATGTTTTGTTTTCACACTTCTCCACCTCTTTCCCCCACTACCTCAATTTATTTCTTCTGTTAGATCTCCTTT ....:..:x.....--..:xx.:..x:x:..x....:.x:....:.:.....:.xx.............:..x.:::.x:x.:..x:.::.x:x..:....x...x.::...:...:x:::.xx...x::..:...x::.xx..:x.... 14M2D134M 88/148 59.5% 148/94230402 0.0% 2/148 1.4% 106265490 83949065 +4073 chr4 + 190214555 185743977 185743976 185744140 164 TCCCCTCCTCCTCCTCCTGTCCCCCTCACCTTTCCCCTTTCCC-----TCCTCTCCCATTTCCACTTTCTTCCCCTTCTTCCTCCTTCTCCCCCTTCCTTTCCT-CCTCCTCTTCCACTTCCCCCTTTCTCTTCTCCCCC----TCCTCCTCCTTTTCCTCTTCTTCCTCCTCC chr4 - 94230402 79652949 79652948 79653113 14577290 14577289 14577454 165 TCTCCAGCTGCTTTTGTAGCACTTCACACCCTTACCCTTCCTTAGCTGTCTTCTTCAACTCTGGCTCATCTCACCTT---------TCTCACCCCTTCTCTCCTGCCTACTCTTTCAGTTCCCCATTTCTCTCTTCCTCTTTTATCCCTCTCATCTTCCTTTTATCTCACATCC ..:..xx..x..::.x:x.:x.::.x....:..x.....:.::-----..:...:.x.:.::x:..:x::..x....---------....x...:.:..:....-...x.....:..x......x.......::...:.:----...::...x.:.....:..x.::.x.x... 43M5I29M9D18M1I35M4I30M 101/155 65.2% 165/94230402 0.0% 19/155 12.3% 106091028 84123527 +3399 chr4 + 190214555 185744045 185744044 185744163 119 CCTTCTTCCTCCTTCTCCCCCTTCCTTTCCTCCTCCTCTTCCACTTCCCCCTTTCTCTTCTCCCCCTCCTCCTCCTTTTCCTCTTCTTCCTCCTCCTTCCCTTCTCTCTTTTTTTGTTA chr4 - 94230402 46886079 46886078 46886197 47344206 47344205 47344324 119 CCTTCTCCCTCCTTTTCCCTCATGTTTTCCTTCTATTTTGTAACCTGCACACTGTTCAGCCTGTTCTCTTCTCCCCGTTGTCCCTCTGCATATCCCCTCACACTTTTTTTTTTTTGATA ......:.......:....:.x.x:......:..x:.:.x:x..:.x.x.x:.x:..xx.::x::...:..::..:x..x::.:...x.x.x::..:..x.x::.:.:........x.. 119M 70/119 58.8% 119/94230402 0.0% 0/119 0.0% 138857966 51356589 +3033 chr4 + 190214555 185751169 185751168 185751206 38 TACTAAAAAAAAAAAAAAAAAAAGAGAAAGAGAGAGAA chr4 - 94230402 87676343 87676342 87676380 6554023 6554022 6554060 38 TACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAA ...:...............:.:.....:.......... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 98074826 92139729 +3045 chr4 + 190214555 185767476 185767475 185767538 63 GGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAATGAAAGAG chr4 - 94230402 37322372 37322371 37322433 56907970 56907969 56908031 62 GGTGAAAGAA-AAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAG ..:..x...:-:..x.::..:.xx...:..............:.....:....:...:.:... 10M1D52M 46/62 74.2% 62/94230402 0.0% 1/62 1.6% 148445104 41769451 +3043 chr4 + 190214555 185934598 185934597 185934632 35 TAAAAATACAAAAAACAACAACAACAACAACAACA chr4 - 94230402 49846415 49846414 49846449 44383954 44383953 44383988 35 TAAAAATACAAAAAACAACAACAACAAAAACAACA ...........................x....... 35M 34/35 97.1% 35/94230402 0.0% 0/35 0.0% 136088183 54126372 +4061 chr4 + 190214555 185947686 185947685 185947758 73 CTGCAACCTCCGCCTCCTGGGCTCAAGTGATTCTCCTGTCTCAGCCTTCCAAGTAGCTGGAATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x..:.....:.......x...x.xx.x.........:.............:....x..... 73M 56/73 76.7% 73/94230402 0.0% 0/73 0.0% 167750560 22463995 +3906 chr4 + 190214555 185975330 185975329 185975403 74 CCACAGCCTCAAACTCCTCGGCTCAAGGGATCCTCCTGCCTTAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:......:x..:..:..x..:.....x.x.:.x.xx.x..:.....::...........:......x...... 74M 55/74 74.3% 74/94230402 0.0% 0/74 0.0% 167778204 22436351 +3413 chr4 + 190214555 185979911 185979910 185979997 87 AGAGCGAAACTCCATCAAAAAAAAAAAAGAAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGACAGAAAGACCAT chr4 - 94230402 32280598 32280597 32280679 61949724 61949723 61949805 82 AAAGTAAAAGTCCACTAAAAAAAAAAAAGAAA-----GAAAGAAAAGAAGTACTGGAAAGAACAAGGATGGAGTATGAAAGGAGCAT .:..::...x....::................-----........:....x.xx.:.:::.:x.....x...:x.:::..:..x... 32M5D50M 58/82 70.7% 82/94230402 0.0% 5/82 6.1% 153699313 36515242 +3022 chr4 + 190214555 185984485 185984484 185984540 56 TGTCTGGGATTTGCTGAGTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTGATCTAT chr4 - 94230402 63548937 63548936 63548992 30681411 30681410 30681466 56 TGGCTATAATTTTCAAAGGTTTTTTGTTGTTTTTTTTTGTTTTGTTTTTAATATAT ..x..:x:....x.x:..x......x.......x...............:..x... 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 122435548 67779007 +3480 chr4 + 190214555 185985195 185985194 185985352 158 TGGCTAATTTTTGGTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTT chr4 - 94230402 18235214 18235213 18235367 75995036 75995035 75995189 154 TGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTCT--AGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTT--TTCTCTTCTTAGGTTTCTTATTGTCAT--GTTCATCCTACCTTCTT ..x..:x.x.....xx....:...x..x:.x.:..:x.xx..x:....::...x..x.:.....--xx.......x.x:..:..x--.......::...:.x.......x..--..:.:.....xxx..:...x:.x:.x.--x.:.x....x....... 64M2D19M2I25M2D27M2D17M 102/152 67.1% 154/94230402 0.0% 8/152 5.3% 167749981 22464574 +3032 chr4 + 190214555 185985201 185985200 185985291 91 ATTTTTGGTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT chr4 - 94230402 41570551 41570550 41570641 52659762 52659761 52659852 91 ATTTTATTTATTGTCCTTCTGCTTTTTTTTTTCTTTCTTTCTTTAATTTGCACAGCTCATCTCCTTTTCCTGAATTCTTTCTTTCTAACTT .....xxx.x..x..:....x::...:.................xx..:x:x.xx:::x...:::....:.xxx............xx... 91M 60/91 65.9% 91/94230402 0.0% 0/91 0.0% 144414650 45799905 +3690 chr4 + 190214555 185985203 185985202 185985329 127 TTTTGGTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT------CTTTTCTTTCT---------TTCTTTCTTTTTTTCTTTCCTTCCTTCCTT chr4 - 94230402 45185609 45185608 45185750 49044653 49044652 49044794 142 TCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT .:.::.....:.x:...x...........::..:x...:.:x.:..::..........xx:....:.:..::.:x:..xx.x...:------...x.......---------.xx.:....x..:.:..::...:xx..:.. 86M6I11M9I30M 83/127 65.4% 142/94230402 0.0% 15/127 11.8% 140799594 49414961 +3049 chr4 + 190214555 185985205 185985204 185985292 88 TTGGTTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 15963348 15963347 15963435 78266968 78266967 78267055 88 TTAGTTGTTTTTGTACTTATCTGGTCTTAATACTTTCTCTCTTTCTCTCTTTTCCCTTTTGATTTTTTTTTTTAATCTTTGTTTTCTT ..:...x...:.x.x:..x.:.xx.:..xx.x......:.......:.....:::::...xx..:...:...:xx.....x...::.. 88M 57/88 64.8% 88/94230402 0.0% 0/88 0.0% 170021857 20192698 +3246 chr4 + 190214555 185985211 185985210 185985282 72 TTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT chr4 - 94230402 8141249 8141248 8141320 86089083 86089082 86089154 72 TTTGCTATCTCTCTTTCTTGTTCATTCCCCCTGTCTTTTTTTTTTTTTTCCCTGCACTTTTTCCCTTCTCCT ...x..x...:........x...x...:::..x.....:...:...:..:.:.x.x:.:....::.::.:.. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 177843962 12370593 +4379 chr4 + 190214555 185985239 185985238 185985400 162 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTC-TTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTC---CTTCCTTCTTTCTTTCTTTCTTTCTTTCTTT--TTCTTTCTTTCTTTCTTTCTTTTCTTT chr4 - 94230402 45185583 45185582 45185750 49044653 49044652 49044820 168 TTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCCCTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTTAATCTTT ..x..x..:x:....::....:..xx::.:xx..:.:.x:...x................-...:.:x.:...:.......:..xx:..:.:....:..:x...x---....::x..x::.x.......xx.:x:.::.--.:::..x..::.....:.:.xx..... 60M1I44M3I31M2I27M 103/162 63.6% 168/94230402 0.0% 6/162 3.7% 140799656 49414899 +3110 chr4 + 190214555 185985243 185985242 185985373 131 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:..:...:x.:....x....:.:..:x.x:.x:xxx:....:.xxx:..:xx:x....:x:.:...:..x:.x:x..:.xxxx.x::......::.....x........x...:...:.:. 131M 76/131 58.0% 131/94230402 0.0% 0/131 0.0% 145766563 44447992 +3097 chr4 + 190214555 185985251 185985250 185985343 93 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC chr4 - 94230402 35294589 35294588 35294681 58935722 58935721 58935814 93 TTTCCTCTTTTTCCCTTGCATTATTTCTTCTTCCTTTACTTTCTTATTTTCCTTCCTCTTCATTTTTCCTTAGTCACTGTTTTCTTCTCATTC ..:::.....:.::...x.x..x......::.:::..x....::.x.:..:...:..:..:x.:.......xx.:x..x::...:.::.x.:. 93M 56/93 60.2% 93/94230402 0.0% 0/93 0.0% 150690662 39523893 +3816 chr4 + 190214555 185985255 185985254 185985377 123 TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCT----TTTTTTCTTTCCTTCCTTCCTTCCTTCCTTCC----TTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCT chr4 - 94230402 40218680 40218679 40218810 54011593 54011592 54011723 131 TTTTTTTTTTTTTCCTTCGTCTCTTGCTTTTTCTCCATGCTATGAATTTTTTTAAACTTTAGCATTTTCACCCTTCTTTATTATGTTTCAGAATGTTTTCCTTTTTTCTTGCTTTCTTTGTTTTTTTTTCT ..:...:...:..:...:x.:....x....:.:..:x.x..x.xxx.:...:.----...xx:x...:.x:.....:..x:.x:x..:.----.x::......:......x........x...:....... 53M4I32M4I38M 83/123 67.5% 131/94230402 0.0% 8/123 6.5% 145766575 44447980 +3331 chr4 + 190214555 185985266 185985265 185985336 71 TTTCTTTCTTTCTTTCTTTCTTTCTTTTC--TTTCTTTCTTTCTTTTTTTCTTTCCTTCCTTCCTTCCTTCCT chr4 - 94230402 22629305 22629304 22629377 71601026 71601025 71601098 73 TTTCTTTCTTTTCTTTCATGTTCATATTCATTCTCTTTTGTTCATTTATTCTTTGCTTCCTTCCTCTCTTCCT ...........::..::x.x..:x.x...--.:.....:x...x...x......x..........::...... 29M2I42M 54/71 76.1% 73/94230402 0.0% 2/71 2.8% 163355961 26858594 +3357 chr4 + 190214555 185985327 185985326 185985390 64 CTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTT chr4 - 94230402 68014329 68014328 68014392 26216011 26216010 26216074 64 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTCACTATT ..x.....:::...:..:x........:.::.:.:.::x...................x:.x.. 64M 46/64 71.9% 64/94230402 0.0% 0/64 0.0% 117970998 72243557 +3233 chr4 + 190214555 186052939 186052938 186053027 89 TATACTAGTATTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTG----TCACCAGGCTGGAGTG chr4 - 94230402 76182397 76182396 76182489 18047914 18047913 18048006 93 TACCTTAGCATATGCTTTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTTCATCATTAAGGCAGAGTG ..:x:...:..x.x:....:..x::x....:xx........x............:...x.:..xx...:....----...::.:.x::..... 73M4I16M 61/89 68.5% 93/94230402 0.0% 4/89 4.5% 109870542 80344013 +3069 chr4 + 190214555 186053981 186053980 186054064 84 AAATCTACAAAACAAAACAAAACAAAACAAAACAAAAACAAAAACAAAAATAAACGAAAACAAAAATTAGGCCAGTGGCACGTG chr4 - 94230402 64214430 64214429 64214512 30015891 30015890 30015973 83 AAAACAATCAATCACAGCAAGA-GGCACAAGACAAAAGCAGAAACAAAAATAGAGAAAGACTGAAGTTAGGCCATAAATATGTG ...x.x.:x..x..x.:...:.-::x....:......:..:...........:.x:..:..x:..:........xx:::.:... 22M1D61M 56/83 67.5% 83/94230402 0.0% 1/83 1.2% 121839551 68375004 +3893 chr4 + 190214555 186070770 186070769 186070857 88 CATGATTCATTGCAGCCTTAACCTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTACAGGCTTGTGCCAC chr4 - 94230402 18197117 18197116 18197202 76033201 76033200 76033286 86 CATCATGTTCTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ...x..x:x:.:.....:x..x..:.....:.....:.x.:.x.xx.x........::..................--.x..::.... 76M2D10M 63/86 73.3% 86/94230402 0.0% 2/86 2.3% 167873653 22340902 +3152 chr4 + 190214555 186089451 186089450 186089554 104 AAGAGATAAAGGAAAGGAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAAAAAGAAAGGAAGAT-GAAAGAAAGAAAGAAAAGAAAG-------AAAAATTCAAGGAGAAGGC chr4 - 94230402 62511306 62511305 62511416 31718987 31718986 31719097 111 AAAAGATAAAGAAAAAAAAGGAAGACAG-AGGGCAGCAGTCAGCAAAAAATGAAGAGGAAGGCAGAAGGAAAGACAGAAGGGTAAGGCTGACAGCAACTTGAAAGAGAGAGC ..:........:...::...:....x..-.:..x..x.:xx.:x......x::.:......::-...:......x....::.x...-------:x..x..x..:....::.. 28M1D34M1I22M7I19M 71/103 68.9% 111/94230402 0.0% 9/103 8.7% 123578145 66636410 +3534 chr4 + 190214555 186092580 186092579 186092663 84 TCCTTGCAGAGATCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTATCTGAGTGAGTACTTGGTAGAAAGGGACAGAA chr4 - 94230402 49339960 49339959 49340043 44890360 44890359 44890443 84 TTCTTTTTGATGTATTTCTCCTTCTCTCTCTCTCTTTTTTTTTTTTTCCTTGTGGAAAAGAGGTATTAATGGAAAGGGAAAAAA .:...x:x..x:.x.:....::...........:.............::..:.xx:.:x...xxx..::.:........x.:.. 84M 57/84 67.9% 84/94230402 0.0% 0/84 0.0% 136752620 53461935 +3297 chr4 + 190214555 186092591 186092590 186092637 47 ATCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTT-------TTTATCTGAG chr4 - 94230402 18929911 18929910 18929964 75300439 75300438 75300492 54 ATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAG ..:.................:................-------.......x.. 37M7I10M 44/47 93.6% 54/94230402 0.0% 7/47 14.9% 167162680 23051875 +3272 chr4 + 190214555 186092594 186092593 186092633 40 TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTATC chr4 - 94230402 18929912 18929911 18929951 75300452 75300451 75300491 40 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTC .:..................................x:.. 40M 37/40 92.5% 40/94230402 0.0% 0/40 0.0% 167162682 23051873 +3004 chr4 + 190214555 186092596 186092595 186092630 35 TCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929946 75300457 75300456 75300491 35 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTT .:...............:................. 35M 33/35 94.3% 35/94230402 0.0% 0/35 0.0% 167162684 23051871 +3422 chr4 + 190214555 186127761 186127760 186127827 67 CTGCAACCTCTGCCTTCCAAGTTCAAGCAATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGAACTACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:xx:x....:::.......::x...x.xx.x........:................... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 167930635 22283920 +3178 chr4 + 190214555 186136942 186136941 186137025 84 CTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT------------------------TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGTGC chr4 - 94230402 43081925 43081924 43082032 51148371 51148370 51148478 108 CTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAACGC ..x..:...::.:..::.:.:........x.:..------------------------....x.:...:...............x.xx..:::...:...x...::.. 34M24I50M 60/84 71.4% 108/94230402 0.0% 24/84 28.6% 143055017 47159538 +3322 chr4 + 190214555 186143618 186143617 186143683 66 CTCCCAGGTTGAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCACGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::....x.....x...x..x.x........::::...........:....--.::....... 54M2D10M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 167946479 22268076 +3281 chr4 + 190214555 186150377 186150376 186150446 70 GTTTTTTGCTT---GCTTGCTTTCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAG chr4 - 94230402 17623026 17623025 17623098 76607305 76607304 76607377 73 GTCTCTTGCTCCAGACTTCCTTTCTCAACCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAG ..:.:.....:---:...x.......xx:.:::..x:..............:.x....x........:.:... 11M3I59M 52/70 74.3% 73/94230402 0.0% 3/70 4.3% 168527351 21687204 +3001 chr4 + 190214555 186150394 186150393 186150429 36 TTTCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT ...............x...:................ 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 167220482 22994073 +3001 chr4 + 190214555 186150396 186150395 186150431 36 TCTCTCTCTCTCTGTCTCTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929912 18929911 18929947 75300456 75300455 75300491 36 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .:...........x...................... 36M 34/36 94.4% 36/94230402 0.0% 0/36 0.0% 167220484 22994071 +3020 chr4 + 190214555 186176928 186176927 186176965 38 TGTGTGTGTGTGTGTGTGTGTGTGCATGCACGTGTGTT chr4 - 94230402 6987297 6987296 6987334 87243069 87243068 87243106 38 TGTGTGTGTCTGTGCATGTGTGTGCATGCACGTGTATT .........x....::...................:.. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 179189631 11024924 +3372 chr4 + 190214555 186202547 186202546 186202633 87 AGATCTCACATCTTCA----CCTTGCCCATGTACTACACACACACACGCATACACTCATGTAAACCCATGCACACACATGCACACACTTAC chr4 - 94230402 1470628 1470627 1470718 92759685 92759684 92759775 91 AAATCTCACTTCTCCAGTCTCAGTGTTCCTTAACTACACACACACACACATATATATATCTCAACACATGCACAAATGTGCACCAATGTAC .:.......x...:..----.xx..::.x.xx...............:....:.:x:..x.x...x........x.::.....xx.:x... 16M4I71M 62/87 71.3% 91/94230402 0.0% 4/87 4.6% 184731919 5482636 +3874 chr4 + 190214555 186202784 186202783 186202925 142 ATGCGCACACACGTGCATACACTCACACACAAATATACACACACACCCAGATACTCATGCACATACACACACATGCACACATATACCCACATGCACACATGCATGCATACACATGCATGCACACA---------TATACCCACATGCACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCAC--ACACACGTTTGCGCACACACATGCAAATGC--ATACACGTAGATGTGTGTGCAGACACTTGC------GCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ...:.......:x.....:...--......:xx.:::........:x..:..:.--..:...:..x.::::::....x...:x.:.------.......:.x....:.:.x....x:::...x::---------.:.:....:..x..... 22M2D30M2D30M6D33M9I17M 89/132 67.4% 141/94230402 0.0% 19/132 14.4% 97186702 93027853 +3301 chr4 + 190214555 186202850 186202849 186202937 88 ACACACATGCACACATATACCCACATGCACACATGCATGCATACACATGCATGCACACATATACCCACATGCACACATGCATGCATAC chr4 - 94230402 27943537 27943536 27943624 66286779 66286778 66286866 88 ATAAGCATACACTGGTGTACACATGCACAGGTGTGCAGATATGCACATGTATGTGCTCATATATTCAAATGTCCACATACATTCACAC .:.x:...:...xx:.:...x..::::..x:::....x::..:......:...::.x......::..x...:x.....:...x..:.. 88M 55/88 62.5% 88/94230402 0.0% 0/88 0.0% 158259313 31955242 +3075 chr4 + 190214555 186203034 186203033 186203090 57 GCATATACACATACATAGATGCACATATATACACACATGCACACATAAATGCACACA chr4 - 94230402 90815416 90815415 90815472 3414931 3414930 3414987 57 GTATGTACACACGCAGCTGTGCACACATACAGACACATGCACACATAAGCACACCCA .:..:......::..xxx:......:...:.x................:::...x.. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 95387618 NA +3022 chr4 + 190214555 186245788 186245787 186245835 48 ATCTAATTTTTGGAGTTTTTTTTTGTTTGTTTTTTGGTTTTTTTTTTT chr4 - 94230402 7806542 7806541 7806589 86423814 86423813 86423861 48 ATCTCATTTTTAAGGTGGTTTGTTGTTTTTTTTTTGGTTTTTTTTTTT ....x......:::..xx...x......x................... 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 178439246 11775309 +3298 chr4 + 190214555 186257285 186257284 186257370 86 CAGAAAAGATAT-CAAGATTATAAAATAACCCAACGGATGGTCTGTGCTGGCTATAAAGAAGGGGGAAAAGATGCTTGTAAGGTAAC chr4 - 94230402 41061132 41061131 41061218 53169185 53169184 53169271 87 CAGAAAAGAAGTGTATGATGGGGACATAACACCTAGGATGTTGTGTGCTGGGTACTTGGAAGGAGGAGTAGATGCTTGTCAGGTAAC .........x:.-:.x...x:x:.x.....x.xxx.....x.x........x..:xx:.....:...:x..........x....... 12M1I74M 62/86 72.1% 87/94230402 0.0% 1/86 1.2% 145196153 45018402 +4676 chr4 + 190214555 186257983 186257982 186258170 188 GTAACTTTCT-----ACTATTTTATTTTTCC---ACTGTGACTCAGGGAGATTCAGGTGGTCCCTTAGTTTGCAAACACAATGGAATGTGGCGTTTGGTGGGCATCACCAGCTGGGGTGAAGGCTGTGCCCGCAGGGAGCAACCTGGTGTCTACACCAAAGTCGCTGAGTACATGGACTGGATTTTAGAGAAAACA chr4 - 94230402 9284452 9284451 9284647 84945756 84945755 84945951 196 GTGATTTTCTGTCAAATTAAATAATCTTTCCTTACTTTTAACACAGGGAGATTCTGGTGGACCTCTGGCCTGTGAGAAAAATGAAATCTCTTACCTTTATGGAGTCATCAGCTGGGGAGATGGCTGTGGCAGAGTCAACAAGCCTGGAGTATATACAAGAGTAACAAACTATGTAAATTGGATTAATGAGAGAATA ..:.:.....-----.:..xx.x..:.....---x:.x.:..x...........x.....x..::.:.::..::.:x.x....:...x.xx::::.xxxx..x:...:.........x..x.......x.x.x:xx:.xx.:.....x..x..:..x.:...x:.x:.x..::.::.:......xxx....:..:. 10M5I16M3I162M 117/188 62.2% 196/94230402 0.0% 8/188 4.3% 176973531 13241024 +4099 chr4 + 190214555 186258017 186258016 186258157 141 TCAGGGAGATTCAGGTGGTCCCTTAGTT--TGCAAAC-ACAATGGAATGTGGCGTTTGGTGGGCATCACCAGCTGGGGTGAAGGCTGTGCCCGCAGGGAGCAACCTGGTGTCTACACCAAAGTCGCTGAGTACATGGACTGGAT chr4 - 94230402 41014192 41014191 41014335 53216068 53216067 53216211 144 TTAGGGTGATTCTGGTGGGCCACTGGTTCATGCAAATTCCAGAGGAATCTGGTATCTCGTGGGAATAGTGAGCTGGGGTGATGAATGTGGCAAGGCTGATAAACCAGGAGTGTACACACGAGTGACTGCATATCGAGACTGGAT .:....x.....x.....x..x:.:...--......:-x..:x.....x...::.:.x.....x..x::x...........x.:x....x.x:x:xx..xx....x..x..x.....xx:...x:...x:..:xx:........ 28M2I7M1I106M 94/141 66.7% 144/94230402 0.0% 3/141 2.1% 145243825 44970730 +3104 chr4 + 190214555 186265514 186265513 186265587 74 AAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAGAAAGA chr4 - 94230402 36858304 36858303 36858376 57372027 57372026 57372099 73 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGA-CAAGAAAAGAAAAA ..x.....x...::.............:.x..x.:xx....::....:..:::x..::.-x...........:. 59M1D14M 52/73 71.2% 73/94230402 0.0% 1/73 1.4% 149407210 40807345 +3356 chr4 + 190214555 186265518 186265517 186265607 90 AAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAGAAAGAAAGTAAGAAGCAAGCAAGCT chr4 - 94230402 36858304 36858303 36858387 57372016 57372015 57372099 84 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGA------CAAGAAAAGAAAAAGCCAGCATGTT ..x.....x...:....:.........:.x..x.:xx....::....:..:..x..::.------x......:x..:....x....x.:. 59M6D25M 60/84 71.4% 84/94230402 0.0% 6/84 7.1% 149407214 40807341 +3403 chr4 + 190214555 186273528 186273527 186273605 78 CTCCAGCCTCAACCTCCTGGGTTCAAGTGATCTTCCTGCCTTAGCCTCTGGAGTAGCTGGGACCAGAGGCATGCACCA chr4 - 94230402 18197126 18197125 18197201 76033202 76033201 76033277 76 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCA ..x.....:x..x..:.............x.::x.xx.x..:.....:.x:.........:..:.x.--.:....... 67M2D9M 56/76 73.7% 76/94230402 0.0% 2/76 2.6% 168076402 22138153 +3124 chr4 + 190214555 186285314 186285313 186285395 82 GCGGTCTTCGTGT-----GTGTGTGTGCGTGTGTGTCTGTGCAGTGTGCGTGTGTGTGCGTGTCTGTGTGTGCGTGTGCGGGTGTGT chr4 - 94230402 1002570 1002569 1002656 93227747 93227746 93227833 87 GCGGTCCTTTTGCTCCGCGTGTGCGCGTGTGTGTGTCTGTGCCCTCTCCGTGTGCTTGTGCATCCGTGTGCATCTATTTGTGCGCGT ......:.:x..:-----.....:.:.:..............xx.x.x......:x..:.::..:.....:::x.:.x:.x.:.:.. 13M5I69M 55/82 67.1% 87/94230402 0.0% 5/82 6.1% 185282744 4931811 +4325 chr4 + 190214555 186288451 186288450 186288600 150 AGGGAGATTCGGGAGGCCCTCTGTCCTGCAAACACAATGAGGTCTGGCATCTGGTAGGCATCACGAGCTGGGGCGAAGGCTGTGCTCAAAGGGAGCGGCCAGGTGTTTACACCAACGTGGTCGAGTACGTGGACTGGATTCTGGAGAAAA chr4 - 94230402 9284496 9284495 9284645 84945758 84945757 84945907 150 AGGGAGATTCTGGTGGACCTCTGGCCTGTGAGAAAAATGAAATCTCTTACCTTTATGGAGTCATCAGCTGGGGAGATGGCTGTGGCAGAGTCAACAAGCCTGGAGTATATACAAGAGTAACAAACTATGTAAATTGGATTAATGAGAGAA ..........x..x..x......x....::.:x.x.....::...xx:.:..xxxx..x:...:x........x..x.......x:x:.:xx:.xx:...x..x..x..:..x.:x..:::x:.x..:..::.:......xxx....:.. 150M 93/150 62.0% 150/94230402 0.0% 0/150 0.0% 177003955 13210600 +3190 chr4 + 190214555 186293285 186293284 186293326 42 TGTGTGTGTGTGTGTTTGAGAGAAAGAGAGAGAGAGAATGAA chr4 - 94230402 18982315 18982314 18982356 75248047 75248046 75248088 42 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAGGA ...............x.......:............:.x.:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 167310970 22903585 +3513 chr4 + 190214555 186295682 186295681 186295755 74 CTGCAACTTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCTTCTCAGGTAGCTAGGATTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:.::xx.x..:.:.........:.x...x.xx.x......:.:...:......:.:.:....x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 168098556 22115999 +4202 chr4 + 190214555 186299680 186299679 186299846 167 ATAGGGACTTATCC------CACAGCTGCCCTCCAGAAAGCTT--GCTTGCTTTTTCTTTCTTTCTTTTCTTTC-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTTTCTTTCTTTCTTTCTT chr4 - 94230402 45185569 45185568 45185743 49044660 49044659 49044834 175 ATAGGGATTTATGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTTTAACTCTTCC---CTTTCTCACTTAGTGCTTCTCACTACTTGTCTTTCTAACCACCCCTAATCTCTTATTCTTTTCTCTTT .......:....x.------.x..x:.x.....:xxxx..::.--.:..x..x:...x................-...:.:x.:..::..........xx:....:.---......:x...--.x:....:x..x::.x.......xx.:x:.::.x....:.:x......::.::.. 14M6I23M2I29M1I32M3D11M2I55M 111/164 67.7% 175/94230402 0.0% 14/164 8.5% 141114111 49100444 +4290 chr4 + 190214555 186312018 186312017 186312131 114 CTTCCTTCCTTCCTCCTCCTCCTCCTCTTTCTCCTCCTCCTCCTCCTTCTTCTTCCTCTTCTCCTTCTTCCCCTTCTTCTTCTTCCTCTTCTCCTTCCTCTTCTTCTTCTTCCT chr4 - 94230402 93339618 93339617 93339731 890672 890671 890785 114 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCCCTGCGCTCTCTTTTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCT ..:...x.xx:..xx....:..:x::.x:........x:.x....:xx:....:...x:x...::.:...:..x..:x.........::.x:...:.......:...x.::... 114M 73/114 64.0% 114/94230402 0.0% 0/114 0.0% 92972400 NA +3146 chr4 + 190214555 186317754 186317753 186317822 69 AAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAGAGAAAGAAGCCAATCTGAAAAGGCTGCATGCTGCG chr4 - 94230402 70325379 70325378 70325447 23904956 23904955 23905024 69 AAAAAAAAAAAACAAAAAAAAACCAACCAAAGACAGCTAAAAGCATAATTGAAAAGGCTGCAGGTTGTG ............x....:....xx..xx...:.x..xx.:....xx.x:.............x.:..:. 69M 51/69 73.9% 69/94230402 0.0% 0/69 0.0% 115992375 74222180 +3445 chr4 + 190214555 186320711 186320710 186320781 71 ATCCTCTCCCAGTTTATGGCTTTCCTTTTCATCTCCTTTCTATTTT-CTTTTCCTTTTTTTTTTTTTTTTTT chr4 - 94230402 92912643 92912642 92912714 1317689 1317688 1317760 72 ACCCCTTTCCTGTTGAAAGCTTTCCTTTTCATCTCTTCTCTATTTTACTGTTCCCCTCCCTATATTTTTTTT .:..::.:..x...x.x:.................:.:........-..x....::.:::.x.x........ 46M1I25M 53/71 74.6% 72/94230402 0.0% 1/71 1.4% 93408068 NA +3177 chr4 + 190214555 186343512 186343511 186343556 45 ACCCTTCTGTGTTTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT chr4 - 94230402 65759178 65759177 65759222 28471181 28471180 28471225 45 ACATTTCCAGGTGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTT ..x:...::x..x................................ 45M 39/45 86.7% 45/94230402 0.0% 0/45 0.0% 120584334 69630221 +3651 chr4 + 190214555 186349022 186349021 186349091 70 GCCTTCCGATTCAAGAGATTCTCATGCCTCAGCCTCACAAGTAGCTGGGACTACAGGCATGCACCACTGT chr4 - 94230402 18197138 18197137 18197205 76033198 76033197 76033265 68 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGT ..:.::x.:......x.x...x..x.x........:x...........:......--.:........... 55M2D13M 54/68 79.4% 68/94230402 0.0% 2/68 2.9% 168151884 22062671 +3390 chr4 + 190214555 186378349 186378348 186378415 67 CTGCAACCTCAACCTCCTGGGCTCAAGCGATTCTCCCACCTCGGCCTTCCAAGTAGCTGGGGCTATA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:..:..:x..x..:.....:.....:.x...x.xx:x...:.....:...........::...:. 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 168181223 22033332 +3247 chr4 + 190214555 186401151 186401150 186401207 57 CAGCACACAAAAGGGAGTATGAGCAAAAAAAAAAAAAAAAAAAAAAAAAA--AGAGTTT chr4 - 94230402 89553998 89553997 89554056 4676347 4676346 4676405 59 CAGAACACAAATAGGATTTTGAACAGAAAAAAAAAAGAAAAAGAAAAAGAGCAGAGTTT ...x.......x:...x.x...:..:..........:.....:.....:.--....... 50M2I7M 47/57 82.5% 59/94230402 0.0% 2/57 3.5% 96847153 93367402 +4004 chr4 + 190214555 186406174 186406173 186406320 147 ACATGCACACACCTACACGCACACACTCATGCCCCCCCACACACACCCACGCACACCC----ATGTGCACACACGCCCACACACTCACACCCACACAAGCTCACGCACACACGTGCACACACACCCCACATGCTCGCACACACACCCCCAC chr4 - 94230402 89016082 89016081 89016228 5214175 5214174 5214321 147 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGC----TGTGCCCATATCCACACCCCCAC .::........:..:..:........x.:.x:x.x.x......::.xx.:...:..x.----.....::::..x:.x.x::.:.x.....xx.::.:x..:..:.x:.....x.....xxx::.----::...:.::.:x........... 58M4I62M4D23M 89/143 62.2% 147/94230402 0.0% 8/143 5.6% 97390092 92824463 +3088 chr4 + 190214555 186441295 186441294 186441364 70 AGAGTTCAAATACATTTTAAGTGACGTTCCTGAAAAATAAAGCTTTTTTTTTTTTTCAAAAATAGAGTAA chr4 - 94230402 48687414 48687413 48687483 45542920 45542919 45542989 70 AGAGGTAAATCACTTTTTATGGGAACTTCCTACAGAAGAAAGTTTTTTTTTTTTTTCAGTAACAGACCAA ....x.x..x:..x.....x.x..xx.....:x.:..x....:...............:x..:...x:.. 70M 51/70 72.9% 70/94230402 0.0% 0/70 0.0% 137753881 52460674 +3501 chr4 + 190214555 186446655 186446654 186446816 162 TACAGTTTTTGGCACAATTTATTTCCTTCCTTCCT---TCCTTCCTTCC--TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCGCCTGCC-------CTCCCTCCCTCCCTCTCTCTCCCTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCTCTCTCTCTCTTTCTTT chr4 - 94230402 9693662 9693661 9693834 84536569 84536568 84536741 173 TATGGCTAGTTGTAAATTTTAATTTTTGCCTTCTTAATCTCTTCCTCCCAGTCCCTTCTGTTTATCTTTCTCTTGAATACTTCAACTGCTAATTTTGCTACATGACTTCTTC-CTCTCCCTTTCCCTTTTTTCTTCACTTCCTATTTTTGTTATTTTTTTCTTTCCCTTTCCCT ..::.:.xx.x.:.x.x....x..::.x.....:.---::......:..--.:.....:x.::x..:...::.:xxx:x:.:.:x....:-------..x.x.xx..:.:..-...........::.:.......:x...:::x..:..x:.x...:.:...:..:.....::. 35M3I11M2I39M7I15M1D61M 99/161 61.5% 173/94230402 0.0% 13/161 8.1% 176752993 13461562 +3978 chr4 + 190214555 186446772 186446771 186446888 117 TTTCTTTTCTTTTCTTTCTTTCTCTTTCTCTCTCTCTCTTTCTTTCTTTCTTTTCTAGGATGGAGTTTTGCTCTTGTTGGCCAGGCTGGAGTGCAATAGTGTGATCTTGGCTCACCG chr4 - 94230402 60073514 60073513 60073628 34156775 34156774 34156889 115 TTTCTCTCCTTTTCTTTGTTTCTCTTTCTTGTGCTCCTTTTATTTAATTCTTTACTAATATGAAGGTCTGCTCGGGT--GCTTCTTTGGTGTGCTAAAATCTATTCTTGATTAGCTG .....:.:.........x...........:x:x...::...x...xx......x...:x...:..x.:.....xx..--..:xxx:...x....x.x.:.x.:x.....::.x:.:. 77M2D38M 78/115 67.8% 115/94230402 0.0% 2/115 1.7% 126373258 63841297 +3127 chr4 + 190214555 186448742 186448741 186448815 74 CTGCAGCCTGGACTTCCTGTGCTCAAACAGTCCTCCTGCCTCAGCCTTCTGAGGAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:::.x:.:...x.:....:::x.:.x.xx.x.........:::..x....:.:......x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 168251616 21962939 +3978 chr4 + 190214555 186475221 186475220 186475365 145 AAGGAAGGAAGGAAAAGAGAGAGAA--AAGAAAGGAAGAAAGAA------AGAAGGAAGGAAGGAAGGAAAAGAAAGAGAGAGAGAAAGAAAGCAAGCAAGCAAGCAAGAAAGAAAGAAAGGAAAAAGAAAG---AAAGAAAAAGAAAGAAAGAAA chr4 - 94230402 29503820 29503819 29503975 64726428 64726427 64726583 156 AAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAAAAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAA ..:..:..............:....--:.........:...:..------.:.......::.::x:.:.x.x:..x..x.:x:..x.::..:...xx:..:xxx:.:..:..x.:..x..:...xx.....:---.:..x...:..x::.:.::.. 25M2I17M6I82M3I21M 93/145 64.1% 156/94230402 0.0% 11/145 7.6% 156971401 33243154 +3115 chr4 + 190214555 186475341 186475340 186475397 57 AAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 7711349 7711348 7711405 86518998 86518997 86519054 57 AAAAGCAGAAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAA ...::x...........:...:.......:..xx...:x...::...:...:.:... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 178763992 11450563 +4346 chr4 + 190214555 186485400 186485399 186485518 119 TTCCCCCCGTTCCCTCCCCCTCCCCTCTTTTCTTTTCTCCCTTCCCCTCCATTCCCCTCCCCTCCCATCTGTCTTCTCCCCTCCCCTCCC---------CTCCTCTCCCTTCTCCTTCCCTTCCGCTT chr4 - 94230402 61964789 61964788 61964916 32265487 32265486 32265614 128 TTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCT ..::..::x.........:....:...:.:........:......x..x..:x:x.x.:.:.:::.x:.x.x..:.:......x.x::..---------.........x.x....:.x.x.:..x.:. 90M9I29M 79/119 66.4% 128/94230402 0.0% 9/119 7.6% 124520611 65693944 +3098 chr4 + 190214555 186485423 186485422 186485476 54 CCTCTTTTCTTTTCTCCCTTCCCCTCCATTCCCCTCCCCTCCCATCTGTCTTCT chr4 - 94230402 55227335 55227334 55227388 39003015 39003014 39003068 54 CTTCCTTTTTTTCCTTCCCCCCCCTCCATTCTCCTCCCTTTCTTTCTGCTTGCT .:..:...:...:..:..::...........:......:.:.:x....::.x.. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 131258088 58956467 +3173 chr4 + 190214555 186485501 186485500 186485569 69 TCTCCTTCCCTTCCGCTTCCTTTCCTTTCTTCCCCTTTCCCCTTTCCCCTTTCCTTTCTTTTCTTTTCT chr4 - 94230402 20485619 20485618 20485686 73744717 73744716 73744784 68 TTTCCACCCCTGCCCCACCCCCCCCCTT-TTCCCCTTTTCTCTTTCCCCTTTCCCTTTCTTTTTCCTTT .:...x:....x..x.x:..:::..:..-.........:.:.............:..::...:.::.:. 28M1D40M 48/68 70.6% 68/94230402 0.0% 1/68 1.5% 165999882 24214673 +3271 chr4 + 190214555 186489724 186489723 186489784 61 CTCCCGGGTTCAAGTGATGCTTCTGTCTCAGCCTCGTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197139 18197138 18197199 76033204 76033203 76033264 61 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.:...........x.x.x:xx.x........:x::.........:......x...... 61M 46/61 75.4% 61/94230402 0.0% 0/61 0.0% 168292585 21921970 +3869 chr4 + 190214555 186493484 186493483 186493556 73 TGCAGCCTCAACCTCCTGGGCTCAAGTGATCCTCCCACTTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCAC chr4 - 94230402 18197127 18197126 18197199 76033204 76033203 76033276 73 TACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC .:.....:x..x..:.....:.......x.:.x.xx:x:.......::.........:.:......x...... 73M 54/73 74.0% 73/94230402 0.0% 0/73 0.0% 168296357 21918198 +3192 chr4 + 190214555 186509419 186509418 186509483 65 GAAAGGAAGGAGGGAGGGAGGGAAGGAAGGAGAGAGGAGGGAAAGAAGGAGAGAGGGAAGGAGAG chr4 - 94230402 51453165 51453164 51453229 42777174 42777173 42777238 65 GAGAGGAGGGAGGAAGGGAGGGGAGGAGAGAAAATGATGGAAAACATGGAGAGTAGGTAAGACAG ..:....:.....:........:....::..:.:x.:x..:...x.x......x:..x.:..x.. 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 135056254 55158301 +3613 chr4 + 190214555 186544112 186544111 186544169 58 CTGGGTTCAAGCAATTCTCCTGGCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197142 18197141 18197199 76033204 76033203 76033261 58 CTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ...........::x...x.xx..........::::.........:......x...... 58M 46/58 79.3% 58/94230402 0.0% 0/58 0.0% 168346970 21867585 +3300 chr4 + 190214555 186567811 186567810 186567877 67 CTGCAGCTTCAATCTCTTGGGCTCAAGAGATCCTCTCACCTCAGCCTCTCAAGTAGCTGGGACCACA chr4 - 94230402 18197126 18197125 18197192 76033211 76033210 76033277 67 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:....::x..x..::....:.....x.x.:.x.xx:x........:............:..:... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 168370685 21843870 +3458 chr4 + 190214555 186571201 186571200 186571282 82 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCAAGTAGCTGG-ACTACAGGCCCGTGCCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx.x..:.............x...x.xx.x......:.:............-......--.x:.::....::.. 60M1I6M2D14M 60/80 75.0% 81/94230402 0.0% 3/80 3.8% 168374075 21840480 +3141 chr4 + 190214555 186605197 186605196 186605262 66 TGAGTGTAACTCCATCTCAGAAAAAAAAAAAAAAAAAAAGAGGAAGAGAGGAAGGAAGAGGAGGAG chr4 - 94230402 37322374 37322373 37322439 56907964 56907963 56908029 66 TGAAAGAAAAGCCCTTGCCAAAAAGAAAAAAAAAAAAAAGAGAGAGAGAAGATGGAGGAGGAAAGG ...:x.x..xx..x.:x.x:....:.................::.....:..x...:.....:::. 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 149282823 40931732 +3365 chr4 + 190214555 186605230 186605229 186605308 79 AAAAAAGAGGAAGAGAGGAAGGAAGAGGAGGAGTGGGGAGGAGAAAGAGAAGAGGTTGACAAGA-GGAGGAAAAGTGAGA chr4 - 94230402 40472546 40472545 40472625 53757778 53757777 53757857 80 AAAAAAAAGAAAAAAAGGAAAAAAAAGGAGGGGGGGGGGGGGGGGATTTAAGAGGTGAAAAAGATGGAAGAGAATTTGGA ......:..:..:.:.....::..:......:.x....:..:.::.xxx.......x:.x....-...:..:..x.x:.. 64M1I15M 55/79 69.6% 80/94230402 0.0% 1/79 1.3% 146132684 44081871 +3133 chr4 + 190214555 186609863 186609862 186609951 89 TGAACACAGGGGTATTATCGTTGATATCTGTTACATTAACGTTCACAGTGGCAACGTCGCTCAGTGAAGGCGTGCCTCCATCAGTGGCC chr4 - 94230402 88998334 88998333 88998422 5231981 5231980 5232069 89 TGATCACCGGCGTGTTGTCGTTGACATCCAGGACAATCACCCTGACAGTGGCATTGCTCTGCAGAGAGGGATTGCCCCCATCTTTCGCC ...x...x..x..:..:.......:...::xx...x.x..x:.x.........x:.::x:x...x..:..xx....:.....xx.x... 89M 59/89 66.3% 89/94230402 0.0% 0/89 0.0% 97611529 92603026 +3054 chr4 + 190214555 186645379 186645378 186645442 64 ATATATATATATATATATATATATATATATATATATATATATATGCCTGTAAAAAACTGAGATA chr4 - 94230402 43936357 43936356 43936420 50293983 50293982 50294046 64 ATTTAAAAATATCTATAAATACCTATATTTATATAGATTTATATGCCTATAAATACCTAAAATA ..x..x.x....x....x...:x.....x......x..x.........:....x.x..:.:... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 142709022 47505533 +12973 chr4 + 190214555 186673609 186673608 186674004 396 TTTAATTAAAACATATACCTAT---------CAATTCTTTTAATTAAAATTGCTGCAATAACTTCAAAATTAGCTGAGGAAGCTTTCTGACTTG-CAAACTTACTAAAACGTAGTATTAATTAAGTACATAATCAGATTTTAAGCATCATGTTTCAAGCCCAGGGATTTCTTTAGCTCTGCA--AAGAGTCATTCCCAGGGTAAGCTCTGCTAAACCATGTTGTCCCGCTTTGTTGAGGAATGATTCCAAGTTCTGACTTCCCTGTCAGAATCACTGATATTGTCAATGACGGCTTTTGTGGATAAGCTCTACTGTTAAAGAGGATCACCCTTGGGTATCAA--AACTTATCATCTGGACACCTGTTAATTGGATAAAACT-ACATCCACAAGA----CAGCCTTCAGAAGCATT chr4 - 94230402 30634633 30634632 30635042 63595361 63595360 63595770 410 TTTGATCAAAACCTGTGTTCATGCAGTTGTTAAAATATTTTCTTTTTTATCCCAGGGATGGCTTTTAAAGCAGCTGAAGAAGCTTTTTGATTTGTCCAGCTTATTAGAATTCAG-ATTAATTAAGTTTGTAATCAGATTTCAAGAACCATGTGCCAGGCC-AGGGATTTCTCTTAGTTTGTTTTAGCTGTCATTCCCAGGTCAAATTCGACTAAACTGCATTTTCATGCTTTGCTGAGAAATGATTGCAGGTTTTGATTTCCATTACAGAATCATTAATATTGTTAATGAGAGTTCTCATGGATAAGC---ACACTTAAGGAGGATCATCCCTTGGAATTGGGCGCATTACAGTTTGATCGTTTGTTAATTAGATAGAATTGGCTTATGCAAGACTATCAGATTTAAGATGGATT ...:..:.....x.:.::::..---------x..x.x....xx..xxx..:x.x.x:..::...:x...x:......:........:...:...-.x.:....:..:..:x:..-...........x::...........:...x.:.....x:..:...-..........:.x:x.:..:x--.:xx............x:..::..x:......::::..x..x:......:....:.......x..:...:...:....x.xx........:.:.......:.....x:.:.:.::.........---..xx....:........:..:.x..x..:::--:xx...:x:.:..:x.:::........:....:..:.-:.x.x::.....----...x:..x...x.x... 22M9I63M1I19M1D45M1D21M2I124M3D31M2I37M1I12M4I17M 269/391 68.8% 410/94230402 0.0% 24/391 6.1% 156038976 34175579 +3708 chr4 + 190214555 186705020 186705019 186705096 77 CTCCAGCCTCGACCTCCTGGACTCAAGCCATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCAC ..x.....:x:.x..:....::.....:xx.:.x.xx:x........::...........:......x...:..... 77M 55/77 71.4% 77/94230402 0.0% 0/77 0.0% 168507894 21706661 +3811 chr4 + 190214555 186716859 186716858 186716941 83 CTGCAACCTCTGCCTTCTGGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTAGGAATACAGGCATGCACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..............:.x...x..x.x........::::.......:.:.x....--.:........::.. 67M2D14M 59/81 72.8% 81/94230402 0.0% 2/81 2.5% 168519733 21694822 +3288 chr4 + 190214555 186732118 186732117 186732174 57 TTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTAATGGGAGAGCATAGGTTTCCATATT chr4 - 94230402 9440362 9440361 9440418 84789985 84789984 84790041 57 TTTTTTTGTTTGTTTGTTTTGTTTTGTTTTCTGGATGAGAGCATATGTCATTAAATT ..............................:x:x:x.........x..:x::.x... 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 177291756 12922799 +3031 chr4 + 190214555 186732119 186732118 186732168 50 TTTTTTGTTTGTTTGTTTTGTTTTGTTTTTAATGGGAGAGCATAGGTTTC chr4 - 94230402 75937766 75937765 75937815 18292588 18292587 18292637 50 TTTTTTGTTTGTTTATTTTGTTTTGTTCTTGGTGGAAATAAGGAGGTTTC ..............:............:..::...:.:x:x:x....... 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 110794353 79420202 +3054 chr4 + 190214555 186736278 186736277 186736360 83 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTGTCGCTCTGTCACCCAGGAGGCTGGAGTGCAGTGT chr4 - 94230402 76182413 76182412 76182495 18047908 18047907 18047990 83 TTTTTTGTCGTCTTCAGTTTTTTTTGTTTTTTTTTTTTAAGAAAAAGGGTTGTTCTGTTCATCATTAAGGCAGAGTGTTTTGT ......x.:x.:..:xx........x............:...x::..x..:.:.....:xx:..xx.:.x::.....:xx... 83M 55/83 66.3% 83/94230402 0.0% 0/83 0.0% 110553865 79660690 +3050 chr4 + 190214555 186741175 186741174 186741218 44 ATCTAATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTAGACAGAG chr4 - 94230402 8256066 8256065 8256109 85974294 85974293 85974337 44 ATTTAATTCTTCTTTTTTTTTTTTTTTTAATCTTCAAGACAGAG ..:.........................xx.:..:x........ 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 178485109 11729446 +3192 chr4 + 190214555 186771956 186771955 186772014 59 TTTGACTGGATGAATACTGGTAGATATAACACATACAAACAAAAGTTCTGTGGAGTCCT chr4 - 94230402 78517230 78517229 78517288 15713115 15713114 15713173 59 TTTAACTGCTTGACTGCTGCCAGATATACCAGGTACAAACAAAAGTTCTGTTGACTTCT ...:....xx...x.:...x:.......x..x:..................x..x.:.. 59M 46/59 78.0% 59/94230402 0.0% 0/59 0.0% 108254726 81959829 +4116 chr4 + 190214555 186779904 186779903 186779974 71 GCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCAAGCACCACTGCG chr4 - 94230402 18197138 18197137 18197206 76033197 76033196 76033265 69 GCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ...:.............x...x.xx.x.........:...........:.:....--.:x.........:. 55M2D14M 57/69 82.6% 69/94230402 0.0% 2/69 2.9% 168582766 21631789 +3379 chr4 + 190214555 186788137 186788136 186788202 66 CTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCACCCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.:...........x...x.xx.x........:..:.........:.:....--.::x...... 54M2D10M 50/64 78.1% 64/94230402 0.0% 2/64 3.1% 168590998 21623557 +3045 chr4 + 190214555 186807732 186807731 186807831 100 GCTACCACTCATGTTTTTTCGGAATGAATGTTTTAGTAGAATATGTATATGACTGTCTAAATATATGTGTATACATACACACACATATGTATATATAAAT chr4 - 94230402 52487109 52487108 52487208 41743195 41743194 41743294 100 GCTACCTTTTTAACCTTCTTGAACAAAAGGATTTGAAAAAGGATTTGTATCATTTTTTAAATGCACATATATATAAATACAGATGTATGTGTATATAAAT ......x:.:xx:::..:.:.:.xx:..x.x...::x.:.:x..x.:...x.:.x.:.....::.::.:....:.x.:...x.::.....:......... 100M 60/100 60.0% 100/94230402 0.0% 0/100 0.0% 134320623 55893932 +3774 chr4 + 190214555 186866346 186866345 186866424 79 CTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACCTGTGTGCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTAC--ACGTGCACCAC ..:..:..:xx:x..:.............x...x..x.x........::::.........:.:...--::......... 66M2D11M 57/77 74.0% 77/94230402 0.0% 2/77 2.6% 168669220 21545335 +3099 chr4 + 190214555 186872800 186872799 186872889 90 TATATATATA------TGTATAAAGACACACAAACATATATGTGTGTGTGTGTATATATATATATATATATGTTTAGTTTTAGTAGCTAGTACTGC chr4 - 94230402 40224643 40224642 40224738 54005665 54005664 54005760 96 TACATATGTAACTTTTTGTGCAACAGGACAGATTTCTGTGTGTGTGTGTATGTATATATAAATACATATGTGTTCAATATAATTTGTTGATTCTGC ..:....:..------...::..x::x...x.xx:x.:.:.........:..........x...:....:....:.:.x.x.x.x.:.::.x.... 10M6I80M 61/90 67.8% 96/94230402 0.0% 6/90 6.7% 146648157 43566398 +3115 chr4 + 190214555 186872833 186872832 186872871 39 ATGTGTGTGTGTGTATATATATATATATATATGTTTAGT chr4 - 94230402 52579774 52579773 52579812 41650591 41650590 41650629 39 ATACGTGTGTGTGTGTATATATATATATATATGTTTAAT ..::..........:......................:. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 134293059 55921496 +3129 chr4 + 190214555 186872834 186872833 186872878 45 TGTGTGTGTGTGTATATATATATATATATATGTTTAGTTTTAGTA chr4 - 94230402 19559296 19559295 19559340 74671063 74671062 74671107 45 TGTGTGTGTGTGTGTATATATATATATATACAGCTAATTTTTGTA .............:................::x:..:....x... 45M 38/45 84.4% 45/94230402 0.0% 0/45 0.0% 167313538 22901017 +3249 chr4 + 190214555 186877380 186877379 186877497 118 GTGTGCATGTGTGTGCATATATGTGTGTATAAGTGTGTGTGTATATATGTATGTTTATATGTGTGTATATGTGTGTGTATGTGTATATGTGTGTATGTATATGTGTGTATATGTATAT chr4 - 94230402 73121101 73121100 73121216 21109187 21109186 21109302 116 GTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACA--CGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT .........::.:.x....:.::.:.::.:.::x.::..x...:...:....:xx..:.--:.x.........x..::..:.:x...:.:x:::.x:x.:.::::......x.:.x.. 59M2D57M 68/116 58.6% 116/94230402 0.0% 2/116 1.7% 113756279 76458276 +4027 chr4 + 190214555 186901458 186901457 186901538 81 CTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCACGACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCACCACTGTG ..:..:..:xx.x..:.............x...x.xx.x........::.x.........:......x.:....x..:::. 81M 59/81 72.8% 81/94230402 0.0% 0/81 0.0% 168704332 21510223 +3844 chr4 + 190214555 186905156 186905155 186905305 150 ATGAGTTTCTCATCT--CAAGATTTTTAACTTAATGACATCTACAAAGACCCCTTTTCTTTCTTTCCTTTCTTTTTTCTTTTCTTTCTTTTTTTCTGTCTTTATTTTTCTTTCTTTCTTTC----TCTCTCTTTTCTTTCTCTCCTTCCTTTCTCT chr4 - 94230402 78374875 78374874 78375027 15855376 15855375 15855528 153 ATGCATTTATCAACTTCCTATACTATTAGTTTA-TAAAAGTTTCACCAACCCTTTTTCGTTCTTTCCTGTCCTTTTCCTCTTTCTTCTCTCTCTC--TCTGGATCTTTCCCTTGACTTGTCCAAGTCTTTCTTGTCCACTTCTCTCTCTTTACTCT ...x:...x...x..--.x.x.:.x...::...-.:.x.x:.x..xx:....:.....x.........x..:....:..:..::....:.:.:..--...xx..:....::.:xx::.x..----...:....x..:x::....::..:..x.... 15M2I16M1D61M2D24M4I31M 97/147 66.0% 153/94230402 0.0% 9/147 6.1% 108530281 81684274 +3317 chr4 + 190214555 186905207 186905206 186905356 150 TTTTCTTTCTTTCCTTTCTTTT-----TTCTTTTCTTTCTTTTTTTCTGTCTTTATTTTTCTTTCTTTCTTTCTCTCTCTTTTCTTTCTCTCCTTCCTTTCTCTCTTTTCTTTCTTTCTCCTTCCTTCCCTCCTTTCTT---------TCCTTCTTTCCTTCTT chr4 - 94230402 18235204 18235203 18235367 75995036 75995035 75995199 164 TTCTCTTCATTGCCTGCTGTTTGGGGTTTTTTTTGTTGTTGTTTTCATAATTGCTTCTCCCTTGCTGTTTTTCTAGTTCTTTCATGTTTCCTAAATCTTTCTCCCTTCTATTTCTTTGTTTTCTCTTCTTAGGTTTCTTATTGTCATGTTCATCCTACCTTCTT ..:....:x..x...x::x...-----..:....x..x:.x....:x.:x:.x:x.:.::...x..x.:.....xx:.....:x.x.:..::xxx:.......:...:.x.......x.::.::....::xxx......---------.:.x..:.x....... 22M5I112M9I16M 93/150 62.0% 164/94230402 0.0% 14/150 9.3% 168670003 21544552 +4363 chr4 + 190214555 186905237 186905236 186905430 194 TTTCTTTTTTTCTGTCTTTATT-TTTCTTTCTTTCTTTCTCTCTCTTTTCTTTCTCTCCTTCC----------TTTCTCTCTTTTCTTTCTTTCTCCTTCCTTCCCTCCTTTCTTTCCTTCTTTCCTTCTTTCTTTCTTCCTTCCTT-----TCTTTCTTCCT--TCCTTCCT--TCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTC chr4 - 94230402 28459066 28459065 28459277 65771126 65771125 65771337 212 TTTTTTTTTTACTGACTTTATTATTGCTTTCTGTACTCCTTGCT-TGTTCTCTCCCTTCCTCCTAACATCTGTTTTCACTCTAATTCTTCTTTCCTCTGATTTTTGTGCTTTTCTCTCTTTTATTC-TCTTTTTTTCCTCAGTCTTCTAAGGTATTTCTTGCTGGCCCTACCTGATGTTTCTATCTTTATTTACCCTGTTCCTCTGCCTTTTTC ...:......x...x.......-..x......x.x:.:..:x..-.x....:..:..:.:...----------....x....xx.::.......::..xx:..::x.x....::.::...:.x.:.-.....:....:..xx..:.:-----.x......x..--:...x...--.x:...:x..:..x:..x.::.x..:..:.x::.:.... 22M1I21M1D18M10I53M1D20M5I11M2I8M2I39M 129/192 67.2% 212/94230402 0.0% 22/192 11.5% 158446171 31768384 +3116 chr4 + 190214555 186905265 186905264 186905328 64 TCTTTCTTTCTCTCTCTTTTCTTTCTCTCCTTCCTTTCTCTCTTTTCTTTCTTTCTCCTTCCTT chr4 - 94230402 20830355 20830354 20830418 73399985 73399984 73400048 64 TTTCTTTTCCCACCTCTTTTTCTTACCTCCTTCCTACATTTCTTTTCCTACTTTTTCCTACCTT .:.:.:..:.:x:.......::..x:.........x:x.:.......:.x....:....x.... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 166074910 24139645 +3695 chr4 + 190214555 186905295 186905294 186905494 200 TTCCTTTCTCTCTTTTCTTTCT--------TTCTCCTTCCTTCCCTCCTTTCTTTCC--------TTCTTTCCTTCT---------TTCTTTCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT------CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTCTTTCTTTCTTTTTTGATGGAGTTTCACTCTTGTTGCTGAGCTTG chr4 - 94230402 92912806 92912805 92913031 1317372 1317371 1317597 226 TTCTTCTCCCCATTGTTTTGCTAAGACAGACTCTCCTTAACTCTCCTTTTCCATTCCGGTGACTGCCCTTCCTTTCTAAATCCAGATTTCTTCCCACTTGTGCTCTCTCTTCCCTCCCTCCTGACTCATTTCCACTTCTCATTTTGGCTATTTCTTTTCTCTTTCCTTTTCCTTCTTCCTCTGATCTTATTCTGCTATTTTAAAG-----TCTTTCTCCATCCTTAGCTTG ...:.:..:.:x..x.:..x..--------:.......xx:..:.:::..:.x....--------::...:.:....---------..::...::x...x:x:...:......:...:....xx..:x:....x::::..x...------:..::.....:.:.:::....:.....::.:.xx.::.x.::.x..x....:.x.-----..x:...:xx.x..x...... 22M8I27M8I12M9I58M6I55M5D21M 120/195 61.5% 226/94230402 0.0% 36/195 18.5% 93992489 NA +3517 chr4 + 190214555 186905305 186905304 186905463 159 TCTTTTCTTTCTTTCTCCTTCCTTCCCTCCTTTCTTTCCTTCTTTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTCTTTCTTTCTTTTT chr4 - 94230402 59424945 59424944 59425097 34805306 34805305 34805458 153 TTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTT------TATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTT .:.::...x:...::...:..x..::...:.......xx:x...:xx..::::.x.x:..:x:.:.:.:....x.:.:x...:.x:x:::...:..:.x.x...------.x..x...x.x.:::x...:.:x.x.........:.:...:.:x.:... 104M6D49M 88/153 57.5% 153/94230402 0.0% 6/153 3.9% 127480360 62734195 +3330 chr4 + 190214555 186905348 186905347 186905424 77 TTCCTTCTTTCTTTCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTT chr4 - 94230402 91731746 91731745 91731822 2498581 2498580 2498657 77 TTTCTCATTTCTTTCTGCTTTGCTTTCCTTCCCCCTTCCTTTCTCCCTTTGGAGATCTCTTCCATTTCTCCTCCCTT ..:..:x.........x.:..x.....:...::........:..:....:xxxxx.::.....x..::.:..::... 77M 52/77 67.5% 77/94230402 0.0% 0/77 0.0% 95173602 NA +3398 chr4 + 190214555 186981705 186981704 186981799 95 GTGTGTGTATATATATATATAGCTATATATACATATATATGTATATATAGCATATATATGTATATATAGCTATATATACATATATGTGTATATAT chr4 - 94230402 87985345 87985344 87985439 6244964 6244963 6245058 95 GTGTGTGTATATATATTTATACACACCCTTACACAGGNTTCTTCAGCAAGTAGGGACGTGTATATATATTTGTATATATATATACGTGTCTACAT ................x....xx:.:x:x....:.x:Xx.x.x:.xxx..:.x:x.::..........x:.:......:.....:....x..:.. 95M 63/94 67.0% 95/94230402 0.0% 0/95 0.0% 98996360 91218195 +3596 chr4 + 190214555 186987422 186987421 186987518 97 TCTTTTCTTTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTTCTTCTCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..::.:......:...:......:.:x.::...x.x::::x.:.:xx:...xxx.....x.:...:...............x.xx..:::...:... 97M 62/97 63.9% 97/94230402 0.0% 0/97 0.0% 143905494 46309061 +3276 chr4 + 190214555 186987425 186987424 186987557 133 TTTCTTTTCTTTTCTTTTCT--TTTCCTTTCCTTTCCTTTTCTTCTCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTC---------TCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTTCCCTTCCCTTCCTTTCCCTTCCTT chr4 - 94230402 17018260 17018259 17018403 77212000 77211999 77212143 144 TTTCTCAACATTTTTTTTCTGGCATTTTTACATTCAGCTGTATACTTGCTTCACATTGCTTTTTGTCTTTCATTCTCATCAGTAAACTCTTCTCCCATTCTATTCCTCTCTCTCTCCCCTCTCTCCATTTTCTTTCCCTTTCCT .....:xx.x...:......--:x.::..x.x..:xx:.x.x.x..:x..::x.x.:x..:.:.x...:..x:....---------::::....:.x:...x.::.....:.......:..:..:.x:..:.........:.:. 20M2I55M9I58M 82/133 61.7% 144/94230402 0.0% 11/133 8.3% 169969165 20245390 +3246 chr4 + 190214555 186987427 186987426 186987522 96 TCTTTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTTCTTCTCTCTCTCCTTCTCT-CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..::.:......:...:.....::.:x.::...x.x.:::x.:..xx.:..xxx..-..x.:...:...............x.xx..:::...:... 56M1I40M 62/96 64.6% 97/94230402 0.0% 1/96 1.0% 143905499 46309056 +3108 chr4 + 190214555 186987432 186987431 186987528 97 TCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTTCTTCTCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCT chr4 - 94230402 43081928 43081927 43082024 51148379 51148378 51148475 97 TCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCT ..::.:......:...::....::.:x.::.:.x.x.::.x:.:.xx:...xxx::...x.:...:...............x.xx..:::..::... 97M 58/97 59.8% 97/94230402 0.0% 0/97 0.0% 143905504 46309051 +3195 chr4 + 190214555 187002071 187002070 187002136 66 TGTCTGTTCATGTCCTTGGCCCACTTTTTAGTGGGGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTT chr4 - 94230402 60960440 60960439 60960505 33269898 33269897 33269963 66 TGACTTCTTAAGCTTTTGGCAGGTTTTCTTGTTGGATTTCTTTTGTTTGTTTGTTTGCTTGCTTTT ..x..x:.:.x.:::.....xx::...:.x..x..:...:.................:...:.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 126041631 64172924 +3378 chr4 + 190214555 187036642 187036641 187036715 74 CTGCAGCCTCGACCTCCTGGGCTCAAGCCATTCTTCCACCCTAGCCTCCCAGGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:.....:x:.x..:.....:.....:xx...x:xx:x.::.....::..:........:......x...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 168839516 21375039 +3434 chr4 + 190214555 187037737 187037736 187037802 66 CTCCCAGGCTCAGGTGATCCTCCGACCTCAGCCTCTCAAGTAGCTGGGATTACAGGCATGCACCAC chr4 - 94230402 18197139 18197138 18197202 76033201 76033200 76033264 64 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:.::..:...:...x.:.x.x.:x........:............:.:....--.:........ 54M2D10M 49/64 76.6% 64/94230402 0.0% 2/64 3.1% 168840598 21373957 +3111 chr4 + 190214555 187064361 187064360 187064409 49 GCATCTCAGTTTTTTTGTTTGTTTTTGTCTTTTTTTTTTTTTTGTCACA chr4 - 94230402 56492889 56492888 56492937 37737466 37737465 37737514 49 GCATTTGAGTTTTTTTGTTTGTTTTTGTTTTTTGTTTGTTTTAATCTCA ....:.x.....................:....x...x....x:..x.. 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 130571472 59643083 +3068 chr4 + 190214555 187064817 187064816 187064871 55 AAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAGAAAAAGAAAACGAAAACGAA chr4 - 94230402 4701406 4701405 4701460 89528943 89528942 89528997 55 AAAAATAAACAAAACAGAAAAAGAAAACAGAAAAGCAGAAGAGGAAGAAAATCAA .....x...x....x.:.....:............x.:....::.x.....:x.. 55M 43/55 78.2% 55/94230402 0.0% 0/55 0.0% 182363411 7851144 +3013 chr4 + 190214555 187076324 187076323 187076386 63 GTCTCAGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACATGGT chr4 - 94230402 52983408 52983407 52983470 41246933 41246932 41246995 63 GTTTTTAAAATTAAAAAAAAAGAAAGAAAAAACAAAAAACCCAACAGAAATGAAACACACGGT ..:.:x:..............:...:......x......xxx..x.:...x:..:x...:... 63M 46/63 73.0% 63/94230402 0.0% 0/63 0.0% 134092916 56121639 +3357 chr4 + 190214555 187129443 187129442 187129497 55 ATTCCATTATTCCAGTTTTTTTTTTGTTGTTGTTGTTTTTTTTTTTTGCCTGCGT chr4 - 94230402 72190980 72190979 72191034 22039369 22039368 22039423 55 ATTCCTTTATTCCAGTTGTTTTTTTATTGTTGTTGTTCGTTTTGTTTTGCTATGT .....x...........x.......:...........:x....x...xx..::.. 55M 45/55 81.8% 55/94230402 0.0% 0/55 0.0% 114938463 75276092 +3109 chr4 + 190214555 187133160 187133159 187133229 70 TCCTTCTTTCTTTCTTTCTTTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTACCCTCCCT chr4 - 94230402 22515278 22515277 22515347 71715056 71715055 71715125 70 TTCTTTTTTCTTTTGTTGCTTTTGTTTGTTTTAAACTTTCCTTCTCTCTCTCTTCCTGCCTAACTTTGCT .:...:.......:x..x:........x...:xxx.....:....:...:....:..x:...x.:.:x.. 70M 49/70 70.0% 70/94230402 0.0% 0/70 0.0% 164617882 25596673 +3154 chr4 + 190214555 187169465 187169464 187169515 51 ATATATAATATACATATTATATATAATATGTATATTATATAATATATAAAT chr4 - 94230402 67910093 67910092 67910143 26320260 26320259 26320310 51 ATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT ...:......x.:.....:......:...:....x...:..:......x.. 51M 41/51 80.4% 51/94230402 0.0% 0/51 0.0% 119259372 70955183 +4334 chr4 + 190214555 187169475 187169474 187169597 123 TACATATTATATATAATATGTATATTATATAATATATAAATTATATATTATATATAATATATATAATATATAGTATATATA------ATATATATAA------TATATATTATATATTATATATATATATGAAAA chr4 - 94230402 67910062 67910061 67910196 26320207 26320206 26320341 135 TACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGATAAATTTAAGCTGATTAAATATCAACATTTGAATACATATAAGAAAA .......xxx...:x.x.x:....:...xx:...:....xxx.......:......:............:.........:.------...x..x...------..x....:.xxxx..:x...:.....x..... 81M6I10M6I32M 91/123 74.0% 135/94230402 0.0% 12/123 9.8% 119259413 70955142 +3323 chr4 + 190214555 187169488 187169487 187169572 85 TAATATGTATATTATATAATATATAAATTATATATTATATATAATATATATAATATATAGTATATATAATATATATAATATATAT chr4 - 94230402 67910059 67910058 67910143 26320260 26320259 26320344 85 TATTACATATACAATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACAT ..x..::....:x...:x.x.x...x.:...xx:x..:...xx.x......x:...................:..xx.....:.. 85M 60/85 70.6% 85/94230402 0.0% 0/85 0.0% 119259429 70955126 +3594 chr4 + 190214555 187169493 187169492 187169596 104 TGTATATTATATAATATATAAATTATATATTATATATAATATATATAATATATAGTATATATAATATATATAATATATATTATATATTATATATATATATGAAA chr4 - 94230402 67910050 67910049 67910149 26320254 26320253 26320353 100 TGCCCACTCTATTACATATACA----ATACTAAAAATATACTATTAGATACATAATAAATATATTGTATATAGTATATATAATATGTAGTATATACATGTGAGA ..:x:.:.x...x.:.....x.----...:..x.x...xxx...xx:...:...:..x.....x.:......:.......x....:.x:......:..:...:. 22M4D78M 70/100 70.0% 100/94230402 0.0% 4/100 4.0% 119259443 70955112 +4272 chr4 + 190214555 187171978 187171977 187172109 132 GATTTAATCCTCATGAAAATCCTAGCCAATAGGCC-TTACTATCATTCCCATTGTACAGATGAGGAAACTGACGCACAGAGAGGTTAGGTAAGTTGTCTAAAGTCACACAGCTTGTGAGTGGCAGATCCAGGT chr4 - 94230402 10729159 10729158 10729280 83501123 83501122 83501244 122 GATTTAG-CCTCACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCAGAGTC----------TGGGTACAGAATCCAGGT ......:-.....::.x.x:...:xxx::....:x-.........x::.....x.....:..:.:.......x.....x.x......:....x...:.:.:....----------..:..:xx::........ 7M1D27M1I69M10D18M 86/121 71.1% 122/94230402 0.0% 12/121 9.9% 176442819 13771736 +3133 chr4 + 190214555 187197076 187197075 187197133 58 CTCCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCTCTCTCTTTCTTTCTTTC chr4 - 94230402 68014329 68014328 68014386 26216017 26216016 26216074 58 CTGCCTTCTCCCCTCCCCACCTTCTTTTTCCCCTCCCCGCTTTCTTTTTCTTTCTTTC ..x.....:::...:..:x.....::.::.:..::...x..:...:............ 58M 41/58 70.7% 58/94230402 0.0% 0/58 0.0% 119182747 71031808 +3170 chr4 + 190214555 187202775 187202774 187202861 87 TCTCTAAGCATATATATATATATATATGTGTGTGTGTGTGTGTATATATATATTATTAAATAAGTTTATGGACTTTATAAAATTTAT chr4 - 94230402 48089495 48089494 48089574 46140829 46140828 46140908 80 TCTGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATATTAC---ACAAAATAATAG----TGTAACATTTAT ...x....:x.:......:.::.:.:...:....x.x......:...........:---.:..:x.x..:.----.:...x...... 56M3D12M4D12M 59/80 73.8% 80/94230402 0.0% 7/80 8.8% 139113280 51101275 +3059 chr4 + 190214555 187202781 187202780 187202819 39 AGCATATATATATATATATATGTGTGTGTGTGTGTGTAT chr4 - 94230402 53251980 53251979 53252018 40978385 40978384 40978423 39 AGCATAAATATATACATATGTGTGTGTGTGTGTGTGCAT ......x.......:....:................:.. 39M 35/39 89.7% 39/94230402 0.0% 0/39 0.0% 133950801 56263754 +3884 chr4 + 190214555 187204184 187204183 187204292 109 ACAAATATTAACTCCTTTAATCTTCATAATAGCCATATGTGGTAGGTAAT----ATTACCCACATTTTAAAGATGAGAAAACTGAAGCACTGGGAGATTATGTAATTAGGTCA chr4 - 94230402 10729146 10729145 10729257 83501146 83501145 83501257 112 ATAAACAGGAATTGATTTAGCCT-CACAATACCCCTGTGAGGTAGGTAATTACTATCAGCTCCATTTTACAGGTGGGAAAACTGAGGCACATACAGGTTAAGTAATTTGCCCA .:...:.xx..:.xx....::..-..:....x..x.:..x..........----..:.x.:x.......x..:..:.........:....xx:x..:...x......x.x:.. 23M1D26M4I59M 77/108 71.3% 112/94230402 0.0% 5/108 4.6% 176475038 13739517 +3686 chr4 + 190214555 187209094 187209093 187209195 102 CAAAGATACAACTTTATCCTCTTTTCTTTTCTTTTTCCC---CTCCCTCCCTCCCTTCCTTCCT-TTTCTCTCTCTCTCTCTTCCTGTTTTTTTTAGAAAGGGTCT chr4 - 94230402 21465205 21465204 21465310 72765093 72765092 72765198 106 CAGAAATACAACTTCCTCCTCTCTTTTTTTTTTTTTTCCTGGTTCACCCCCCAGATTTCTTCATATTGCTCTTTCTCTTCCCTCAGATTTTCTTTCCAAGTGGACT ..:.:.........:x......:..:....:.....:..---:..x.:...:xxx..:....x.-..x....:.....::.:..xx:....:...xx..:x..x.. 39M3I22M1I41M 71/102 69.6% 106/94230402 0.0% 4/102 3.9% 165743889 24470666 +3012 chr4 + 190214555 187262010 187262009 187262081 72 CTGCAGCCTCCGCCTCCCGGGTTCCAGCAATTCTCTCGCCTCAGCGTCCCAAGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:.....:xx:x..:.:......x..::x...x.xx.x......x.::.............:....x.::. 72M 49/72 68.1% 72/94230402 0.0% 0/72 0.0% 169064884 21149671 +3007 chr4 + 190214555 187316768 187316767 187316848 81 TTTTGTGAAGCTAATCATATATATGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATACACC chr4 - 94230402 11922398 11922397 11922478 82307925 82307924 82308005 81 TTTTAGGAGGCAAATTTGGAATAGGTCTCTTAATAGACATATATGTGTTTATGTTTGTGTATATATATAGAAATATTTGCC ....:x..:..x...:xx:x...x..x.x.xx...x.:....:.....x.:...x..............x.x....x::.. 81M 56/81 69.1% 81/94230402 0.0% 0/81 0.0% 175394370 14820185 +3019 chr4 + 190214555 187316787 187316786 187316837 51 TATATGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATAT chr4 - 94230402 48089497 48089496 48089547 46140856 46140855 46140906 51 TGTAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT .:..x..x........:.::.:.....:....x.x......:......... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 139227290 50987265 +3223 chr4 + 190214555 187316790 187316789 187316838 49 ATGTGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATATA chr4 - 94230402 4406423 4406422 4406471 89823932 89823931 89823980 49 ATACGTATATATAGTTATAAGTGTGTGTGTGTGTGTGTATCCATATATA ..::..:......xx....x....................x:....... 49M 41/49 83.7% 49/94230402 0.0% 0/49 0.0% 182910367 7304188 +3048 chr4 + 190214555 187316793 187316792 187316846 54 TGTGTATATATATATATGTGTGTGTGTGTGTGTGTATATATATATATATATACA chr4 - 94230402 32959568 32959567 32959621 61270782 61270781 61270835 54 TGTGTACCTATACATGAGTGTCTGTGTACGTGCGTATATACATATATACAAATA ......:x....:..:x....x.....::...:.......:.......:.x.:. 54M 41/54 75.9% 54/94230402 0.0% 0/54 0.0% 154357225 35857330 +3151 chr4 + 190214555 187316805 187316804 187316894 90 TATATGTGTGTGTGTGTGTGTGTATATATATATATATATACACCTCTGTCTTTATATAGATTTCTTTGCATGGATCTATCCAGACAGATA chr4 - 94230402 19559286 19559285 19559371 74671032 74671031 74671117 86 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACAGCTA-ATTTTTGTATA---TTCTtgtggtgggttcacactggtggaca ...x.x.x.x.............:..................x..x-:.:...:....---.....xxx:...:.::.:x.x.:::..:. 46M1D11M3D29M 62/86 72.1% 86/94230402 0.0% 4/86 4.7% 167757519 22457036 +3335 chr4 + 190214555 187316806 187316805 187316860 55 ATATGTGTGTGTGTGTGTGTGTATATATATATATATATACA-CCTCTGTCTTTATA chr4 - 94230402 89821281 89821280 89821336 4409067 4409066 4409122 56 ATGTGTGTGTCTCTGTGTGTGTATATATATATATATGTACAGCCTCAATCTCTTTA ..:.......x.x.......................:....-....x:...:.x.. 41M1I14M 47/55 85.5% 56/94230402 0.0% 1/55 1.8% 97495525 92719030 +3352 chr4 + 190214555 187337369 187337368 187337440 72 CTGCAACCTCTGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCATGTAGCTGGAATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:...:.........x...x.xx.x........::..x..........:....x.::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 169140243 21074312 +3244 chr4 + 190214555 187382491 187382490 187382563 73 CTGCAACCTTTGCTTCCCAGGTTCAAGCGATTCTCATGCCTCAGTCTTTCGAGTACCTAGGATTACAGGTGCA chr4 - 94230402 18197126 18197125 18197198 76033205 76033204 76033277 73 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ..:..:..:xx:x:.:.::........:.x...x..x.x.....:.....:....x..:.:.:....x..... 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 169185365 21029190 +3017 chr4 + 190214555 187396798 187396797 187396844 47 TTTCTCTTTATTTTTGTATGTAGATGCATATGTGTATACACACACAC chr4 - 94230402 19826114 19826113 19826160 74404243 74404242 74404289 47 TTTCTTTTTATCTTTGTATGTGAATGCATATATCTATATATATATAC .....:.....:.........::........:.x....:.:.:.:.. 47M 37/47 78.7% 47/94230402 0.0% 0/47 0.0% 167570684 22643871 +3269 chr4 + 190214555 187396806 187396805 187396862 57 TATTTTTGTATGTAGATGCATATGTGTATACACACACACACACACACACACACACAC chr4 - 94230402 14964828 14964827 14964884 79265519 79265518 79265575 57 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:...x:..:..:.x.:.::.....:......xx........::............. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 172431978 17782577 +3329 chr4 + 190214555 187396806 187396805 187396864 59 TATTTTTGTATGTAGATGCATATGTGTATACACACACACACACACACACACACACACAC chr4 - 94230402 14964826 14964825 14964884 79265519 79265518 79265577 59 TATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x....::...:x.::.:.:.:......:...xx........::............. 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 172431980 17782575 +3167 chr4 + 190214555 187396812 187396811 187396868 57 TGTATGTAGATGCATATGTGTATACACACACACACACACACACACACACACACACAC chr4 - 94230402 14964828 14964827 14964884 79265519 79265518 79265575 57 TGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC ...x..::x:....:.:......::.:.:...xx........::............. 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 172431984 17782571 +3284 chr4 + 190214555 187398573 187398572 187398676 104 TGTCAGCATTTCCATCATAAACCTATATTATCTGGAGCTCATAAGTTGGCTGTAAAA------CTCAGGCAGAATCTAGGCAT-TGAAACCTT--TCTGGAAAAGTGTTATAT chr4 - 94230402 60686084 60686083 60686196 33544207 33544206 33544319 113 TGTCAGCATTTCCATTATAAAACCATATTTTAGGGGGTTTATAACTCAACCATAAAAGCTCACTCTATGCTGAAACTTGGCACATGAAATCCCAACCTGGAACAGATTTTTAT ...............:.....x.:.....x.xx..:.:.:....x.:::.::.....------:::.x..x...x..x....:-.....:.::--:......x..xx..x... 57M6I20M1I9M2I18M 73/104 70.2% 113/94230402 0.0% 9/104 8.7% 126712489 63502066 +3069 chr4 + 190214555 187414466 187414465 187414524 59 AGATTTTTTTCAGTTTTTTTTTATTTTTTTTATTTTTTATTTTTTTTAGTTTTTACAAA chr4 - 94230402 23274718 23274717 23274776 70955627 70955626 70955685 59 AAATACTCTACAGTTTTTTTTTGTTGTTTTGTTTGTTTGTTCTTTTTAGTTTTTAGGAA .:..x:.:.x............:..x....xx..x...:..:.............x:.. 59M 45/59 76.3% 59/94230402 0.0% 0/59 0.0% 164139748 26074807 +3266 chr4 + 190214555 187469640 187469639 187469705 66 TGTAAAGAGAGACACACACAGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAACAAAAGAAGAAAGGA chr4 - 94230402 89611996 89611995 89612061 4618342 4618341 4618407 66 TATATAGAGATATATGCATAGGCAGAGAGAGAGAGAGGAAGAGAGATAAGGCACAAGAAAGAAAAA .:..x.....x.:.::..:..:x...........:..:........x.:::..x.....::..::. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 97857644 92356911 +3658 chr4 + 190214555 187492627 187492626 187492752 126 TCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAGAAAGAAATAGCACCTAATTCTTATTAGAGTTATTTTGCAGTCTAAATGATTTCATATACGTAAAGTAAATAGAATGTTACCTGGCACTTG chr4 - 94230402 93470669 93470668 93470782 759621 759620 759734 114 TCTCTGAAGAAAAAAAAAAAGAAAGAAAAAGAGCGAGAGCAAAAAGCCTCTTAGTCTCATTAAAGG------------CAAATGTTCCCACTTAGGGAAAACAGAGGGTGTTTCACCCAGCACTTG ....x:..:...........:...:.....:::.:::.:x...x...x:..x.x...:....:..x------------:.....x.::..:x..x.x...::.:.x:.x:.x.:...::....... 66M12D48M 74/114 64.9% 114/94230402 0.0% 12/114 10.5% 94021958 NA +3093 chr4 + 190214555 187494492 187494491 187494555 64 TCTTTAAAAAAAAAAAAAAAAATTACCAGTTCTCATTCCCAGAAATTACACAGATATGCCTGTT chr4 - 94230402 85212176 85212175 85212239 9018164 9018163 9018227 64 TCTTTAAAAAAAAACAAAATAAAAACCACTTCTTATTGCCAGAAAATTCATTGACAACCCTGCT ..............x....x..xx....x....:...x.......x.x..:x..:.xx....:. 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 102282316 87932239 +3011 chr4 + 190214555 187512773 187512772 187512831 59 ACATATATATATATATATATATATATATATATATATATATATATATATATACACACACA chr4 - 94230402 37363045 37363044 37363103 56867300 56867299 56867358 59 ACATACTTGTATATACATGCACAAATATATTGGTGTATATGTGTATGTATTCACACACA .....:x.:......:..::.:.x......xx:.:.....:.:...:...x........ 59M 43/59 72.9% 59/94230402 0.0% 0/59 0.0% 150149728 40064827 +3365 chr4 + 190214555 187512775 187512774 187512844 70 ATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATAT chr4 - 94230402 8395796 8395795 8395865 85834538 85834537 85834607 70 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ..:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x.....x.. 70M 50/70 71.4% 70/94230402 0.0% 0/70 0.0% 179116979 11097576 +3397 chr4 + 190214555 187512776 187512775 187512843 68 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATA chr4 - 94230402 8395795 8395794 8395862 85834541 85834540 85834608 68 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x...:. 68M 49/68 72.1% 68/94230402 0.0% 0/68 0.0% 179116981 11097574 +3470 chr4 + 190214555 187512776 187512775 187512861 86 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACATATTTCATTCAATTGAACAA chr4 - 94230402 8395793 8395792 8395871 85834532 85834531 85834610 79 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACA-------CAAATGAATAA .:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x.:.-------...x....:.. 68M7D11M 58/79 73.4% 79/94230402 0.0% 7/79 8.9% 179116983 11097572 +3129 chr4 + 190214555 187512788 187512787 187512844 57 TATATATATATATATATATATATATATATATATATACACACACACACACACACATAT chr4 - 94230402 88147180 88147179 88147235 6083168 6083167 6083223 56 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC-CATAT ..:..:..x:x..............:.x.:.:...:.:.............-..... 51M1D5M 45/56 80.4% 56/94230402 0.0% 1/56 1.8% 99365608 90848947 +3596 chr4 + 190214555 187528419 187528418 187528492 74 CTGCAACCTCTGCTTCCCGGGTTCAAGCAATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx:x:.:.:.........::x...x..x.x........::::.........:......x...... 74M 52/74 70.3% 74/94230402 0.0% 0/74 0.0% 169331293 20883262 +3294 chr4 + 190214555 187544057 187544056 187544147 91 TTTCCTGGCTGCATTTTTTTACATTCTCTCTCTCGCATATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTATATATATATG chr4 - 94230402 70982593 70982592 70982682 23247721 23247720 23247810 90 TTTCATATATATATTTATTCATGTAACTTTTTTC-CTTGTGTGTGTGTATGTGTGTACATATGTTCATAAATGTGTGTGCATACACACATG ....x.:xx.::....x..:.::.xx::.:.:..-.x.:.........:........:....:.x:...x..:.:.:..:...:.:.:... 34M1D56M 59/90 65.6% 90/94230402 0.0% 1/90 1.1% 116561464 73653091 +3117 chr4 + 190214555 187544093 187544092 187544173 81 ATATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTATATATATATGTGTGTGTATATATATATGTATATATA chr4 - 94230402 81401293 81401292 81401373 12829030 12829029 12829110 81 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACA ....x.x.....x.....x..x.x.......:...x:x:..::.:..x:.:.:.....:.:x..:.x:.....x..:..:. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 106142800 84071755 +3014 chr4 + 190214555 187544095 187544094 187544179 85 ATGTGTGTGTGTGTGTGTATATATATATATATATATATATGTATATATATATGTGTGTGTATATATATATGTATATATATATAAA chr4 - 94230402 81401293 81401292 81401377 12829026 12829025 12829110 85 ATATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAAGA ..:.x.x.....x.....x..x.x.......:...x:x:.::..:..x:.:.......:..x..:.x:..:.:x..:..:.x.:. 85M 55/85 64.7% 85/94230402 0.0% 0/85 0.0% 106142802 84071753 +3452 chr4 + 190214555 187544098 187544097 187544179 82 TGTGTGTGTGTGTGTATATATATATATATATATATATGTATATATATATGTGTGTGTATATATATATGTATATATATATAAA chr4 - 94230402 81401294 81401293 81401375 12829028 12829027 12829109 82 TATTTTTGTGTTTGTGTTTAAAAATATATACATAGGGGTACATGTAGGTGTGTGTGTATAAATGTCCATATGGATGTACAAA .:.x.x.....x...:.x..x.x.......:...x:x...:..:..x:............x..:.x::...:x..:..:... 82M 57/82 69.5% 82/94230402 0.0% 0/82 0.0% 106142804 84071751 +3090 chr4 + 190214555 187565293 187565292 187565339 47 TCTTCATTTTCCTCCTCCCTCCTCCCTTCCTCTTCCCCCTTTCTTCC chr4 - 94230402 81754795 81754794 81754841 12475562 12475561 12475608 47 TCTCCTTTTTCTTCCTTCCTCCTCCCTTCCTCTCCTCCCATTGCTCC ...:.x.....:....:................:.:...x..x:... 47M 38/47 80.9% 47/94230402 0.0% 0/47 0.0% 105810498 84404057 +3053 chr4 + 190214555 187580794 187580793 187580877 84 AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAAAGAGAGAAAGAAAGAGGAGG chr4 - 94230402 36858294 36858293 36858377 57372026 57372025 57372109 84 AGAAACAGCTAATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAAG .....x.:xx..x.....x...::...:.........:.x..x.:xx..::::::....::..x..:..x..::.....::.:. 84M 53/84 63.1% 84/94230402 0.0% 0/84 0.0% 150722500 39492055 +3026 chr4 + 190214555 187580796 187580795 187580868 73 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGAAAGAGAGAAAGA chr4 - 94230402 36858304 36858303 36858376 57372027 57372026 57372099 73 AATGAAAGCAAGGGAGAGAGAAAGAAAAACAGCAGTCAAAGGGAGAAGGAGGACAGGGACAAGAAAAGAAAAA ..x.....x...::...:.........:.x..x.:xx..::::::...:.:..x.....x..::.:.....:. 73M 48/73 65.8% 73/94230402 0.0% 0/73 0.0% 150722492 39492063 +3103 chr4 + 190214555 187582729 187582728 187582788 60 CTTCTGGGCTCAGGTGATCCTTCTGCATCAGTCTCCTGAGTAGCTGGAACTACAGGTGCA chr4 - 94230402 18197139 18197138 18197198 76033205 76033204 76033264 60 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCA ........:...:...x.:.x:xx.xx....:..::::................x..... 60M 44/60 73.3% 60/94230402 0.0% 0/60 0.0% 169385590 20828965 +4031 chr4 + 190214555 187603952 187603951 187604097 146 TCCTCTCCTCCCCTCTCCTCTCCTTCCCTCCCCTCTCCTCTCCTCCCCTCCCCTCTCCTCTCCTCCTCTCCTCTCCTCC---CCTCCCCTCTCCCCCCCTTC-------CTCCCCTCCCTTCTCCTCTCCTCCCCTCCCCTCTCCTCCTCCCCTCC chr4 - 94230402 61964779 61964778 61964934 32265469 32265468 32265624 156 TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC .:....x:.x:::..:::::...:......:...........:.::.:...:::.x.:x.x.x.x.x:..::..:.:..---.::....:...x.x.:.:..-------....:....x.x....::x.x.....:.::x..:xx:x.:x...... 79M3I20M7I47M 88/146 60.3% 156/94230402 0.0% 10/146 6.8% 125639173 64575382 +3862 chr4 + 190214555 187603957 187603956 187604101 145 TCCTCCCCTCTCCTCTCCTTCCCTCCCCTCTCCTCTCCTCCCCTCCCCTC--TCCTCTCCTCCTCTCCTCTCCTCCCCTCCCCTCTCCCCCCCTTCCTCCC--------CTCCCTTCTCCTCTCCTCCCCTCCCCTCTCCTCCTCCCCTCCCCTC chr4 - 94230402 61964779 61964778 61964933 32265470 32265469 32265624 155 TTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTC .:...:x:.x.::..::::.:..::...............:.:.::.:..--...x..x.x.x.x:x:......:...:xxx...:.....:.x:x....:--------....::..:x:x....::x.x.....:..:x...xx.x.:x..... 50M2I49M8I46M 89/145 61.4% 155/94230402 0.0% 10/145 6.9% 125639178 64575377 +3674 chr4 + 190214555 187603988 187603987 187604061 74 CCTCTCCTCCCCTCCCCTCTCCTCTCCTCCTCTCCTCTCCTCCCCTCCCCTCTCCCCCCCTTCCTCCCCTCCCT chr4 - 94230402 85651755 85651754 85651828 8578575 8578574 8578648 74 CTTCTCCTCCCCCCTGCTCTGTTCTGTAGTTCACCTCTCTTCCTCCCCCCCCCCCCTCCGTTCCTGCACTCCCT .:..........:.:x....x:...x:xx:..x......:...:.:....:.:...:..x.....x.x...... 74M 53/74 71.6% 74/94230402 0.0% 0/74 0.0% 101952233 88262322 +3546 chr4 + 190214555 187604094 187604093 187604218 125 CTCCCCTCTGCTC---TCCTCCCCTCTCCTCCCCTCC-TCTCCTCTGCCCTCCCCTACCCTTCTCTCCCTTCCTTCTCTTCTTCCTCCCTTCCTTCCTTTATCCCTCTCTCCTTCCCACCCTCTTCTCT chr4 - 94230402 93339618 93339617 93339735 890668 890667 890785 118 CTCCCTGCAGCCCGGCTCCCCCCATCCACTCTCCTCCATCACCTCTGGTTTCTCC----CTGCGCTCTCTT-------TTCTCCATCCACTTCTTCCTTCTACCCTCCCTCTTCCTCTGCCCCCTCTCT .....:x.x..:.---...:...x..:x...:.....-..x......x::..:..----..x.x...:...-------....:.x...x:.:.......:xx.....:...:.:.:.xx..:.:..... 13M3I21M1I17M4D12M7D51M 81/114 71.1% 118/94230402 0.0% 15/114 13.2% 94264476 NA +3398 chr4 + 190214555 187639704 187639703 187639822 119 AGAAAAACATGGTACTTAAAAATACTATCAAAATACTTTTCTTACTTTAAAAGAAAAAAGTTCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTATAGC chr4 - 94230402 54616745 54616744 54616856 39613547 39613546 39613658 112 AGCAATACATTTAACTTAAAAATAGTATAAAATGACCTTTTTTGTTCTCAGTTCCTGATATTCTGCTTGGATTTTTTTTTTTTTTTTGTCTTTTTCT-------GTCTCCCTTTGCTGC ..x..x....xxx...........x...x...xx..:...:..::.:.x.:xxxxx:.x:....:...xxx................x.:.....:x-------........:.::x.. 97M7D15M 76/112 67.9% 112/94230402 0.0% 7/112 6.2% 133022959 57191596 +3143 chr4 + 190214555 187668538 187668537 187668591 54 GGAAAGAAAGAGAGAGAGGGAAGGAAGGAAGGAAGAGGAAGGAAGGAAGGAAAG chr4 - 94230402 19799668 19799667 19799721 74430682 74430681 74430735 54 GGAAAGGAAAAGAGACAGGGAAGGGGGAGGGGAAGAAAAAGGAAAAAAAAAAGG ......:..:.....x........::.:::......::......::..::..:. 54M 39/54 72.2% 54/94230402 0.0% 0/54 0.0% 167868870 22345685 +3125 chr4 + 190214555 187675935 187675934 187675996 62 GAGAGCTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGC chr4 - 94230402 27486715 27486714 27486776 66743627 66743626 66743688 62 GAAGACTGACTGTGTGTGTGTGTGTGTGCCTGAGTGGGTGTAGATGTATCTATTTATAAAGC ..:::....x..................:x..x...x....:x:...:.x.:.x.:..:... 62M 45/62 72.6% 62/94230402 0.0% 0/62 0.0% 160189220 30025335 +3446 chr4 + 190214555 187685174 187685173 187685261 88 TCCCTTCTTACTCTCTTTC---TTTCTTTCCTTCCTCCCTCCCTCTCTCTTTCCTTCCTCCCTCCCTCTCTCCTTCCTTCCTTTCTTCCTT chr4 - 94230402 61964741 61964740 61964831 32265572 32265571 32265662 91 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTT ..:.:.:..x....x....---.:xx:.x.:xx...x::..:..x.:x:........:............::..:.::..:.......... 19M3I69M 60/88 68.2% 91/94230402 0.0% 3/88 3.4% 125720433 64494122 +3005 chr4 + 190214555 187685185 187685184 187685260 76 TCTCTTTCTTTCTTTCCTTCCTCCCTCCCTCTCTCTTTCCTTCCTCCCTCCCTCTCTCCTTCCTTCCTTTCTTCCT chr4 - 94230402 61964778 61964777 61964853 32265550 32265549 32265625 76 TTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTT .:...:.x..x:........:............:::.:.::..:.::..:...::.x.:x:x.x.x.x....:.:. 76M 48/76 63.2% 76/94230402 0.0% 0/76 0.0% 125720407 64494148 +3063 chr4 + 190214555 187687135 187687134 187687180 46 TCTTTTTTTAAAAGAAAACAACAACAACAACAAAACAAAAAAAACA chr4 - 94230402 2928716 2928715 2928761 91301642 91301641 91301687 46 TCATCTCTTAAAAGACAACAAAGACAACAACAAAACAACAAAAACA ..x.:.:........x.....x:...............x....... 46M 39/46 84.8% 46/94230402 0.0% 0/46 0.0% 184758419 5456136 +3019 chr4 + 190214555 187716939 187716938 187716986 48 GGAAAAAAAAAAACAAAAACAAACAACAGCAACAACAACAACAACAAA chr4 - 94230402 26901283 26901282 26901330 67329073 67329072 67329120 48 GAAAAAAAAAAAAAAAAAGCCGACAACAACAACAAAACCAACAACAGA .:...........x....:.x:......:......x.x........:. 48M 39/48 81.2% 48/94230402 0.0% 0/48 0.0% 160815656 29398899 +3198 chr4 + 190214555 187718522 187718521 187718590 69 TTGGTTTTGTTTTGTGTTTTTTTTTTTTTTCACTATAATCTGTTCTTTTTCCTTTTTTTTTCAATTGAA chr4 - 94230402 61270158 61270157 61270226 32960177 32960176 32960245 69 TTGGTTTGGTTTTGTGTTTTTTTTCCCTTTTACCACAACATCTCCTTTTATTTTGGTATTTTAACTCAA .......x................:::...:..:.:..:x.x.:.....x::..xx.x...:..:.x.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 126448364 63766191 +3033 chr4 + 190214555 187719065 187719064 187719110 46 TTTTTGAATCTTTTCTTTTGCTTGTTTGTTGTTTGTTTGTTTGTTT chr4 - 94230402 3457495 3457494 3457540 90772863 90772862 90772908 46 TTTCTGCACTTTCTTTTTTGCTGTTTTGTTGTTTGTTTGTTTGTTT ...:..x.::..:.:.......xx...................... 46M 38/46 82.6% 46/94230402 0.0% 0/46 0.0% 184261570 5952985 +3424 chr4 + 190214555 187722070 187722069 187722153 84 CTGCAACCTTTGCCTCCTGGGTTCCAAGAATTCTTGCGCCTCAGCCTCTCGAGTAGCTGGGATTACAAGTGTGCACCACCATGT chr4 - 94230402 18197126 18197125 18197207 76033196 76033195 76033277 82 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTGT ..:..:..:xx:x..:........x.:x:x...x::x.x........:..:.........:.:....--:.........::... 67M2D15M 57/82 69.5% 82/94230402 0.0% 2/82 2.4% 169524944 20689611 +3003 chr4 + 190214555 187723963 187723962 187724009 47 TTTCAAATGAAACATTTGGAGAAGTTTTTGTTTTCTTTTGTTTCTAT chr4 - 94230402 61896056 61896055 61896102 32334301 32334300 32334347 47 TTTTAAATGAAGCTTATGTAGAGGTTTTTGTTTTGTTTTGTTTTTAT ...:.......:.x.x..x...:...........x........:... 47M 39/47 83.0% 47/94230402 0.0% 0/47 0.0% 125827907 64386648 +3203 chr4 + 190214555 187736649 187736648 187736722 74 AAAAAAGAAAAAAAGAAAAAAAGAAAATGTGTACAGATTGGGAAAGAAGAAATAAAACTGCCTTTGCAGATAAT chr4 - 94230402 41593979 41593978 41594052 52636351 52636350 52636424 74 AGAAGAGAAAAAAAAAAGGAAAGAAAAGATGTACAGCTTAAGAGCAAGGTGATAAATCTGTGGCTAAGGATAAT .:..:.........:..::........x:.......x..::..:x:.:.x:.....x...:xx:.:x:...... 74M 50/74 67.6% 74/94230402 0.0% 0/74 0.0% 146142670 44071885 +3115 chr4 + 190214555 187770206 187770205 187770270 65 GCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAGCTGCTATCT chr4 - 94230402 40625725 40625724 40625789 53604614 53604613 53604678 65 GCTACAGAACAGAACTCAGTCCAAGGTTAAAAAAAAAAGAAAAAAAAAGGTTAGCTCTGCTGTCT ..x.....:.::.....x...:x.::xx..........:.........::.:.:xx.....:... 65M 46/65 70.8% 65/94230402 0.0% 0/65 0.0% 147144481 43070074 +3114 chr4 + 190214555 187794514 187794513 187794556 43 TTTCTTTTTTTTTTTTTTTTTTTTGAGGTGGGGAGAGGGACAG chr4 - 94230402 29505008 29505007 29505050 64725353 64725352 64725395 43 TTTTCTTTTTTTTTTTTTTGTTTTAAGGTGGAGAGAGGGCCAG ...::..............x....:......:.......x... 43M 37/43 86.0% 43/94230402 0.0% 0/43 0.0% 158289506 31925049 +3508 chr4 + 190214555 187808806 187808805 187808871 66 AAAGAGAGAATTAAAAAGACAGAGAGAAAGAAAGAGAGAGAGGAAAGAAGGAAGGAAAAGAAAAGA chr4 - 94230402 48273073 48273072 48273138 45957265 45957264 45957330 66 AAGGAGAGAATGAAGGGGGTAAAGAAAAGCAGCGACAGAGCAGAAAGGAGGAAGGAAAAGAAAAAA ..:........x..:::.::.:...:..:x.:x..x....x:.....:................:. 66M 48/66 72.7% 66/94230402 0.0% 0/66 0.0% 139535733 50678822 +3151 chr4 + 190214555 187808842 187808841 187808898 57 AGAGAGGAAAGAAGGAAGGAAAAGAAAAGATGAGGGAAAGGCAGGAAATAACTTGCC chr4 - 94230402 54025580 54025579 54025636 40204767 40204766 40204823 57 AGAGAAGAAAGGTGGAGGAAGAAGAAAAAATGAGGGGGTGGTAAAAAATAAAATGCC .....:.....:x...:.:.:.......:.......::x..:.::......xx.... 57M 42/57 73.7% 57/94230402 0.0% 0/57 0.0% 133783262 56431293 +3146 chr4 + 190214555 187828497 187828496 187828567 71 AAAAAAAAAAAAAAAAACCAAAAAAAAAAAACCAAAAAAAAAAAAAACAGAGAGAGAGTGAGAGAGAGATC chr4 - 94230402 94076866 94076865 94076936 153467 153466 153537 71 AAAAAAAAAAAATAATTTACAGCGACAACAACAACAACAAAAAAAAAGAGAGAGAGAGAGAGAGATAAATC ............x..xx:xx.:x:.x..x...x.x..x.........x..........x......x.:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 93751631 NA +6549 chr4 + 190214555 187887788 187887787 187888133 346 CTTAATTTTTGAATTTAAGATTTTACAAT--------AGCTATAATTTATTTTCTGTTAACCAACTTAATTTTTACATGCTTACTAA-----------------TGC-----ACCTTTGTATCATAGTGTTT-AGCATTAGCAACACTGTGGGAGAAGAGGCAGAGAAAATATCCATGAAATACAGGTAATCTTTAATTTTATGAGACAGTTTCTTCCCATGAAGAATTTATAACTTTCTCAGCTCTAATCAAA-TTCCCTGCCACAGGAGCACGTTCTAATTAGAGCCATCTGCTCCTAGCAGGATATTCATCCCAGGCCAATGTATGGTGAAACATTCTAATCCATTTTAAGCATCTAATTTGTTTCTGCACTAAA chr4 - 94230402 30256244 30256243 30256589 63973814 63973813 63974159 346 CTTCATATATTACTTTGAATTTTTACAATTTGTCACACTTTCTAGTTCATTTTCTGCCAA------TAGTATACAAATGTCTGCTAAAAACATTCTTTGTGTGTTGCGTAATAATTTTGGATTACAGTCTTTCAGAATCA--AACTCCTGCTAAAAATAAGCAGTGAA--CAGCTGTGACAAGCAGGTAAATTTTAATAATATGAGACAGTTCCTTTCTGTGGAGAA-TTATTATTCTCTCATCTCTAATCAAGCTTCTCTGCTGTAACAGCAGCTGCCAATTAGGGATGTTGTCTCTTGGCAGAGTGCTCAGCCCACAC-------------------TTAATTTATTTAAAATGTGTAG--TGTTTCTCCATTGAA ...x..x.x.x.x...:.:x.........--------xx:.x..:..:........::..------..:.x.x:.x...::.:....-----------------...-----.x:....x..:.:...x...-..x..:.--...x.:xxxx:.:..x.:....x...--:.x.::...x.x:.......x:......xx............:...:.::..:....-....x.:.:.....x..........:-...:....:::.:x....xx.x.:......:.x::.:xx...:.:....::.::...x....x:.-------------------:....::....x..:::.x..:--.......x..:.:.. 29M8I23M6D21M17I3M5I20M1I7M2D26M2D57M1D26M1I65M19D22M2D15M 212/314 67.5% 346/94230402 0.0% 64/314 20.4% 157631544 32583011 +3005 chr4 + 190214555 187889339 187889338 187889389 51 CATGTGCACACGGGCACATAGACATACACACACACACACACACACACACAC chr4 - 94230402 14964834 14964833 14964884 79265519 79265518 79265569 51 CGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:..........x.:.::..x.:.:.xx........::............. 51M 39/51 76.5% 51/94230402 0.0% 0/51 0.0% 172924505 17290050 +3258 chr4 + 190214555 187898451 187898450 187898528 78 AGAAAAGGAAGGA-----AGGAAAGAAGGAAGGAAGGGAGAGAAAGAAAGGGAAAGGAAAGGAAGAAAAGAAGGAAGGGAGGG chr4 - 94230402 55334412 55334411 55334494 38895909 38895908 38895991 83 AGAAGAGGAGGGAGAAGTAATATATAAGGAAGGAAGGAAGATACAGAAAGGAAAAAAAAAATGGGGCATGAGGGAAAAGAGAG ....:....:...-----.:x.x.x............:...x.x.......:...::...:x::.:x.x..:....::...:. 13M5I65M 55/78 70.5% 83/94230402 0.0% 5/78 6.4% 132564039 57650516 +3276 chr4 + 190214555 187898500 187898499 187898563 64 AGGAAAGGAAGAAAAGAAGGAAGGGAGGGAGGGAGGGAAAGAAAGGGAAAGGAAAGGAAGAAAA chr4 - 94230402 37794326 37794325 37794389 56436014 56436013 56436077 64 AGGAAAAAAAAAAAAAAAGGGGGGGGGTGGGTGGGGGGGAGAAAAAAAAAGGGGGGGGGGAAAA ......::..:....:....::...:.x.:.x.:...::.....:::.....:::..::..... 64M 43/64 67.2% 64/94230402 0.0% 0/64 0.0% 150104174 40110381 +3229 chr4 + 190214555 187906578 187906577 187906639 62 CTCAAAAAAAAAAAAAAAAAAAAAAAGTAGAAAACACAATCTGAAGAGACAAAACAAGCACC chr4 - 94230402 31821399 31821398 31821460 62408943 62408942 62409004 62 CTCACAGAAAAGAAAAATAAAAAAAAGGAGAAAACACAAAACAAAGAACCACAGCAAAAACC ....x.:....:.....x.........x...........xx::....:x..x.:...:x... 62M 47/62 75.8% 62/94230402 0.0% 0/62 0.0% 156085179 34129376 +3450 chr4 + 190214555 187915732 187915731 187915829 98 TCCTGCACATATATCCCGGAATTTAAAATAAAATAAAATAAAAATTTAGGTATATATATATATATATATATGTATACACACACACACACAC---TTTTTAC chr4 - 94230402 25393216 25393215 25393316 68837087 68837086 68837187 101 TCCTAGATATGTGCCAAGGGCAGGAAATTAAGTTCTGATAAAAATGTGTGCATGTGTATGTATGTATTTGTGTGTACACACACACACGCACACGTTCTTAC ....:x.:..:.::.xx..:xxxx...x...:x.xx:........x.:x.:..:.:...:...:...x.:...:.............:...---..:.... 91M3I7M 66/98 67.3% 101/94230402 0.0% 3/98 3.1% 162522516 27692039 +3215 chr4 + 190214555 187915775 187915774 187915822 48 ATTTAGGTATATATATATATATATATATGTATACACACACACACACAC chr4 - 94230402 88147183 88147182 88147230 6083173 6083172 6083220 48 ATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC ..x..:.x..............:.x.:.....:.:............. 48M 40/48 83.3% 48/94230402 0.0% 0/48 0.0% 99768592 90445963 +3541 chr4 + 190214555 187931207 187931206 187931289 83 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCTCCAGTAGCTGGGATTACAGGTATGCACCACCACG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACG--TGCACCACTGTG ..:..:..:xx:x..:.::..........x...x.xx.x........:..x.........:.:....x.--........:::. 69M2D12M 58/81 71.6% 81/94230402 0.0% 2/81 2.5% 169734081 20480474 +3033 chr4 + 190214555 187984743 187984742 187984791 49 AAAAAACAAAAAACAAAAAAAAAAAACAAAACAAAAAACAAAAAAAAAA chr4 - 94230402 8842223 8842222 8842271 85388132 85388131 85388180 49 AAAAAACAAAAAACATAAAAAAAAACCTCAAAAAACATCAAAAAAAAAA ...............x.........x.xx..x...x.x........... 49M 42/49 85.7% 49/94230402 0.0% 0/49 0.0% 179142520 11072035 +3176 chr4 + 190214555 187990882 187990881 187990965 84 TTCTTTTGTTGTTGTTTTTGTTTCATTTATTTTTTTATTTTTTTATTTTTTATTTTTTTATTTTTATTTTTTTTTTATTGATCA chr4 - 94230402 3257765 3257764 3257845 90972558 90972557 90972638 81 TCTTTTTGTTGTTGTTGTTGTTTTCACTGTTTTCCTGTTTCTGCG---TGCATTTTTTTTTTACCATTTTTTTTTTACCATTCA .::.............x......:xx:.:....::.:...:.x::---.x:........x..x::............:::x... 45M3D36M 56/81 69.1% 81/94230402 0.0% 3/81 3.7% 184733117 5481438 +3163 chr4 + 190214555 187990905 187990904 187990971 67 CATTTATTTTTTTATTTTTTTATTTTTTATTTTTTTATTTTTATTTTTTTTTTATTGATCATTCTTG chr4 - 94230402 39888422 39888421 39888488 54341915 54341914 54341981 67 CACTTAATGTTTTATTTGTTTGCTTTTTGTTTTTTTGTTGTTCTGTTTTGTTTGCTAATTAGACTTG ..:...x.x........x...::.....:.......:..x..x.x....x...::.:..:.xx.... 67M 49/67 73.1% 67/94230402 0.0% 0/67 0.0% 148102483 42112072 +3105 chr4 + 190214555 187994506 187994505 187994569 64 GACTCCGTCTCAAAAAAGAAAAAAAAAGAGAAAGAAAAGAAAGGAAGGAAGGAAGGAAGGAAGG chr4 - 94230402 24168075 24168074 24168138 70062265 70062264 70062328 64 GACTTAGTTACAAGAAATAAGGAAAAAAAAAAAAAAAAGTGAGAGAAGCAGGAAGCAGGGAAGG ....:x..:x...:...x..::.....:.:...:.....x:..::.:.x......x.:...... 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 163826431 26388124 +3031 chr4 + 190214555 187994518 187994517 187994567 50 AAAAAGAAAAAAAAAGAGAAAGAAAAGAAAGGAAGGAAGGAAGGAAGGAA chr4 - 94230402 7711357 7711356 7711406 86518997 86518996 86519046 50 AAAAAGAAAAAAAAAAAGAAAAAACTGAAATAAGAGAGGGAGGGAAGAAA ...............:.....:..xx....x:.::..:...:.....:.. 50M 39/50 78.0% 50/94230402 0.0% 0/50 0.0% 180283161 9931394 +3474 chr4 + 190214555 188003456 188003455 188003547 92 CACGTCTGTGCGGAATGTGGGAAAGCGTTCGTTGAGAGCTCAAAACTAAAGAGACATTTCCTGGTTCATACTGGAGAGAAGCCGTTTCGGTG chr4 - 94230402 85484629 85484628 85484720 8745683 8745682 8745774 92 CACGTATGTGTGGAGTGTGGGAAAGGATTCCGTCATCCGTCAGAGCTGAAAAAGCATATGAGGACCCACACTGGGGAAAAGCCATACCAGTG .....x....:...:..........x:...xx.x.xxxx...:.:..:..:.::...x.xxx.:::..:.....:..:.....:.x:.:... 92M 60/92 65.2% 92/94230402 0.0% 0/92 0.0% 102518827 87695728 +3001 chr4 + 190214555 188007973 188007972 188008033 61 CAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAATTAACCCA chr4 - 94230402 4077718 4077717 4077778 90152625 90152624 90152685 61 CACAGTGAAATTTCTTCTAAAAAAAAAAAAAATAGGAAAGGAGAAAAGGAAGAATGGCTCA ..x..:..:.:.:.x...x.............x.:.....:.::...:...:.x.::.:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 183930255 6284300 +3026 chr4 + 190214555 188033951 188033950 188034036 86 TACTTTTTTTTCTTTTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTT chr4 - 94230402 45185580 45185579 45185665 49044738 49044737 49044823 86 TGCTTATTGCTCATTTTCCCTCTTCCTAGTCTCAGTTTTCTGCTTCATTCTTTCTTTTCTTTCATTTTTCACCTTTCTTCTTTCTT .:...x..x:..x.....::.:.:::.xx.:.:xx......x:...x...........:...:x.....:x::...:..:..x:.. 86M 55/86 64.0% 86/94230402 0.0% 0/86 0.0% 142848371 47366184 +3032 chr4 + 190214555 188033952 188033951 188034023 72 ACTTTTTTTTCTTTTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTT chr4 - 94230402 68550736 68550735 68550807 25679596 25679595 25679667 72 ACTTTTTTCCCTTGTTCTTTTTGACTTCTCTGTGTTCCGATTTTCTTTTTCTTCTTGTTTGTTTCTTGCTTT ........::...x........xx:....:.x.x..::xx........:.:.::..x...x...:..x:... 72M 50/72 69.4% 72/94230402 0.0% 0/72 0.0% 119483216 70731339 +3097 chr4 + 190214555 188033961 188033960 188034035 75 TCTTTTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTT chr4 - 94230402 51995564 51995563 51995638 42234765 42234764 42234839 75 TCTTGTTTTATCTACTTTCCCTGTTTCTTATTAATCTTGCTTCACTTTTTTTTTATTTTTCTTTTTTCTTTAATT ....x..:.x.:.x:....::.x.:.:..x..xx....x...:x:.........x.....:......:...x:.. 75M 52/75 69.3% 75/94230402 0.0% 0/75 0.0% 136038397 54176158 +3046 chr4 + 190214555 188033964 188033963 188034030 67 TTTTCTTTTTCTTTTCTTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193306 40193305 40193372 54037031 54037030 54037097 67 TTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTTCCT ...:x.:...::.:...:.x......x:.::..xx:...:x:................:.....::. 67M 46/67 68.7% 67/94230402 0.0% 0/67 0.0% 147840658 42373897 +3144 chr4 + 190214555 188033987 188033986 188034047 61 TTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGAGACGGAGTT chr4 - 94230402 18929912 18929911 18929972 75300431 75300430 75300491 61 TTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTGGTCCCATTTATCTCAGAAGTAGCT .....:.:...:...:....................xx.:::x...:.:.x...x.x..:. 61M 45/61 73.8% 61/94230402 0.0% 0/61 0.0% 169104075 21110480 +3154 chr4 + 190214555 188040915 188040914 188040961 47 CAAAACAAAACAAACAAACAAACAAACAAACAAAAAAGAAGGAAATT chr4 - 94230402 38540325 38540324 38540371 55690032 55690031 55690078 47 CAAAACAAAACAAACAAGCAAACAAAAAAAAAATCAAGGAAGAAATT .................:........x...x..xx...:.:...... 47M 40/47 85.1% 47/94230402 0.0% 0/47 0.0% 149500590 40713965 +3043 chr4 + 190214555 188066681 188066680 188066790 110 TTTTACATATGTATTTTTACACAC-----------ACATATATATATATATACACAAATATATATATATATATATACACAAATATATATATATATATATATATATATATATATATATATAT chr4 - 94230402 4417314 4417313 4417434 89812969 89812968 89813089 121 TCTTACATGCCTGTTCATAAAAACTTGAGATTTAGACATATATACACACACACACAAGAACATACGCATGGGAGTTTGCACATGTATTAAGGCATTTAGATATACACATATTTATCTATAT .:......::x.:..:x..x.x..-----------.........:.:.:.:......:x.:...:::..:x:x:.x::..x..:...xx.x::..x..x.....:.:....x...x..... 24M11I86M 70/110 63.6% 121/94230402 0.0% 11/110 10.0% 183649367 6565188 +3664 chr4 + 190214555 188089115 188089114 188089186 72 CTGAATCGCTTGGGTTCAAGCGATTCCCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGGGTGCACCAC chr4 - 94230402 18197133 18197132 18197202 76033201 76033200 76033270 70 CCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC .::..x.x::..........:.x...x.xx.x........:............:......--x......... 60M2D10M 55/70 78.6% 70/94230402 0.0% 2/70 2.9% 169891982 20322573 +3187 chr4 + 190214555 188094079 188094078 188094205 127 AGACAGCATCTCAAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAAACACAAAACAACA----ACAAAAAGCGCTATAGCTGTATCAGAATTTAGAGTGAAAAGACTTAATGTTTTCTTTCTT chr4 - 94230402 65573534 65573533 65573660 28656743 28656742 28656869 127 AGACAACAACGCACCAAAGCAGAGCAAATAAAGAAAGAAAAACTAAAAGAAAAAACACAAAGTAGCATTCTATTAAGATCTCTG-AACTGTTTTAAAAAGTAGAGCACCAA---CTGAAATTTTCTCTATT .....:..x.x..xx...xx.:.:....x.x.:...x......x....x............::.:..----.:x..:.x.x..:-.:....x.:.:..xx.....::xx..---:.:.x:......:.x.. 67M4I13M1D26M3D17M 83/123 67.5% 127/94230402 0.0% 8/123 6.5% 122520545 67694010 +3149 chr4 + 190214555 188094110 188094109 188094190 81 AAAAACAAAAACAAAAACAAAAAACACAAAACAACAACAAAAAGCGCTATAGCTGTATCAGAATTTAGAGTGAAAAGACTT chr4 - 94230402 78376856 78376855 78376925 15853478 15853477 15853547 70 AAAAAAAAAAACAACCACAGAAAACAAAAAACAACAACAAAAAAC-----------AGCGAAGTCAGGAATAAAGAAACTT .....x........xx...:......x................:.-----------.x.::.:.:x:..:.:..:.:.... 45M11D25M 53/70 75.7% 70/94230402 0.0% 11/70 15.7% 109717254 80497301 +3196 chr4 + 190214555 188096732 188096731 188096805 74 CTGCAATCTCCACCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCACTCAAGTAGCAGGGACTACAGGCACAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..::.:xx.x..:...........::x...x.xx:x.......x:.........x..:......x.::... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 169899606 20314949 +3149 chr4 + 190214555 188099564 188099563 188099604 41 AAAAAAAAAAACCAAAACCAAAACCAAAAAAAAAAAAACCC chr4 - 94230402 60804068 60804067 60804108 33426295 33426294 33426335 41 AAAAAAAAAAGCTAAAACCAAAACCAACAAACAAAAAACCC ..........:.:..............x...x......... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 127295496 62919059 +3070 chr4 + 190214555 188145429 188145428 188145488 60 GAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCAGAAATGGA chr4 - 94230402 71886270 71886269 71886329 22344074 22344073 22344133 60 GAGTTTCTATGTCAGAAAAAAAAAGAAAAAAAGAAAAGGTAAAATGAAATTGGAAATGAA ...x:..::.x...:.........:.......:....::x....x:..:.::......:. 60M 43/60 71.7% 60/94230402 0.0% 0/60 0.0% 116259159 73955396 +3056 chr4 + 190214555 188145444 188145443 188145492 49 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCAGAAATGGAATGA chr4 - 94230402 87082869 87082868 87082917 7147486 7147485 7147534 49 AAAGAAAAAAAAAGTACAAAAAAGCAAAAAAAAGTCAGAATTGGGATAA ...:.........:x.x......:x...............x...:..:. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 101062575 89151980 +3251 chr4 + 190214555 188155934 188155933 188156016 83 CTGCAACCTCTGCCTCCCAGGTTCAAACAATTCTCCTGTCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCACACCACCATG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCACTGTG ..:..:..:xx:x..:.::.......:::x...x.xx.x........::.x.........:......--..::......::.. 67M2D14M 55/81 67.9% 81/94230402 0.0% 2/81 2.5% 169958808 20255747 +3035 chr4 + 190214555 188165230 188165229 188165278 49 ACAAATTTTCTTTTCTTTTTTTTTTTTTCAGACAGAGTCTTGCTCTGTT chr4 - 94230402 10483635 10483634 10483683 83746720 83746719 83746768 49 ACAAATCTTCTTTTTTTTTTTTTTTTTTCAAGCAAAAACAAGCTTTGTT ......:.......:...............::..:.:x.xx...:.... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 177681595 12532960 +3028 chr4 + 190214555 188175633 188175632 188175698 66 CAGTATTATGGTTTGCAAAGTCTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTT chr4 - 94230402 48146166 48146165 48146231 46084172 46084171 46084237 66 CAGTCCTGTGGTTTGGAGAGTCCTTTGTTTTTCCTACTATGTTTTTTTTTTTTAAAAAAAAGCCTT ....x:.:.......x.:....:.x.......::.x:.x.x............:.:.x::..::.. 66M 46/66 69.7% 66/94230402 0.0% 0/66 0.0% 140029467 50185088 +3127 chr4 + 190214555 188193600 188193599 188193687 88 TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTCTGCCTTGTTGATTGTACATACTTACTGGAATCTTTTATTTTTTATTACCA chr4 - 94230402 17026035 17026034 17026122 77204281 77204280 77204368 88 TCCAAATGAAAAAAAAAAAAAAGAAAAAAATAGCAACCTCTCATACTGAAACCACATCTTCAGTGGAAAACATGATCCTTTATTACTA ..x...x:..............:.......x..x.x:..x:.x.::...xxx:....x:.:.x.....xx:x.x..::........:. 88M 59/88 67.0% 88/94230402 0.0% 0/88 0.0% 171167565 19046990 +3377 chr4 + 190214555 188200201 188200200 188200281 81 AGGCATCTCTTTCTCTAATATATATATATATATATTTTCTCTAATATATAAATATATATATATATATATATATTTTTTTTT chr4 - 94230402 3135259 3135258 3135339 91095064 91095063 91095144 81 AAACATCTTCCTTCTTAATGTGTATATGATTCTGTTTTTCTCTATATAGAATTATATACATATATATATTTATTCTCTATT .::.....:::.:::....:.:.....:xx.x.:....::::x.....x..x......:..........x....:.:.x.. 81M 54/81 66.7% 81/94230402 0.0% 0/81 0.0% 185064942 5149613 +3124 chr4 + 190214555 188200213 188200212 188200284 72 CTCTAATATATATATATATATATTTTCTCTAATATATAAATATATATATATATATATATATTTTTTTTTTTT chr4 - 94230402 18953828 18953827 18953899 75276504 75276503 75276575 72 CTTTATGATATATATGTACACTCTCTTTATAATATGTATATATATATATATTCAAATGTCTCGTTTTGTTTT ..:..xx........:..:.:x:.:.:.x......:..x............x:.x..:.x.:x....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 169246385 20968170 +3217 chr4 + 190214555 188200238 188200237 188200293 56 TCTCTAATATATAAATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTG chr4 - 94230402 92735345 92735344 92735400 1495003 1495002 1495058 56 TCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTG ...:xx....x..x..:...:..:.:...............:.x.........:.. 56M 44/56 78.6% 56/94230402 0.0% 0/56 0.0% 95464893 NA +3017 chr4 + 190214555 188200239 188200238 188200292 54 CTCTAATATATAAATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735344 92735343 92735397 1495006 1495005 1495059 54 CTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTT ....x::....xx....:...:..:.:........x......:.x......... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 95464895 NA +3312 chr4 + 190214555 188200249 188200248 188200299 51 TAAATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGAGATAG chr4 - 94230402 70265141 70265140 70265191 23965212 23965211 23965262 51 TAAATATATCTATATATATATGTAGTCTTTTTTTTTTTTCCTCTGATACAG .........x...........:..x.:............::.:...x.:.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 117935108 72279447 +3416 chr4 + 190214555 188215974 188215973 188216137 164 AGAAATATAGAAAATATATTGATTCGTCTTACTTGTTTTTACTTCCTGTCTTTTCCCTCCCTCCCTCCCTCCTTCCTTCCTTTTCCTTCCTTCCCTCTTTTCTTCCCTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCTTCCTTCCTTCCCCCC-------TTCCTTCCCCC chr4 - 94230402 83048875 83048874 83049039 11181364 11181363 11181528 165 AGAAATAAGGAAAA------GTTTCACCAACTTTATTTTTTCTTTCTATCTTTTCTTTTCTTTTTCTGCATTTCCCACCTCTGTCCGTGCGTCCCTCTCTCCATCCCCTTCAGCGCTTCTCCATCCATCCGCACCCGCACGCAGCATCACCTCGTAGCATTTCCTTCCCTC .......x:.....------.x...::.xxx:..:.....x...:..:.......::.:.:.:::::x.x::.:..x:.::.x...x.x.x.......:.:.x....::::xx.x::.....x...x...x.x.:.x:x.x:xx.x..x..:.-------.........:. 14M6D133M7I11M 95/158 60.1% 165/94230402 0.0% 13/158 8.2% 105167099 85047456 +4519 chr4 + 190214555 188215996 188215995 188216124 129 TTCGTCTTACTTGTTTTTACTTCCTGTCTTTTCCCTCCCTCCCTCCCTCC---TTCCTTCCTTTTCCTTCCTTCCCTCTTTTCTTCCCTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCTTCCTTCCTTCCCC chr4 - 94230402 92729577 92729576 92729703 1500700 1500699 1500826 127 tccattttctttcttttttttttccat--tttccttcctttATTCCCCTCATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTC---TCTTCCCC .:.:.:..x:..x.....x:..:.::.--.....:...:.:x:....::.---.:x.::...x..:..:.:..:...x....:....::.:.:.....x..:......:..x..:.:....---:....... 27M2D21M3I68M3D8M 84/124 67.7% 127/94230402 0.0% 8/124 6.5% 95486419 NA +4118 chr4 + 190214555 188216119 188216118 188216257 139 TTCCCCCCTTCCTTCCCCCCTTCCTTCCCTCTCTTCTTCCCTCCTTCCCTCCTTCC-CTG---------TCTCCTTCCCTG---TCTCCTTCCCTCCCTCCTT-CCCTGTCTCCTTCC----CTCCTTCCCTCTCTCCTTCCCTCCTCCCTCCCTCC chr4 - 94230402 61964778 61964777 61964934 32265469 32265468 32265625 157 TTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTTATCCAGCACCACCCTCC ..:.:.:x..x:..:..::.....:........:...:.:...:..:.:.......-...---------..........:.---..:..::.:.x.x.....:-.xxx.x.....::.----....:.x.x..:.:....x:.:xx:x..x...... 56M1I3M9I12M3I19M1I14M4I35M 96/139 69.1% 157/94230402 0.0% 18/139 12.9% 126251341 63963214 +3969 chr4 + 190214555 188216219 188216218 188216378 160 TTCCCTCCTTCCCTCTCTC-------CTTCCCTCCTCCCTCCCTCCTTCCTTCCCCCCTTCCTTCCCTCTCTTCTTCCCTCCTTCCCTCCTTCCCTGTCTCCTTC--CCTCCTTCCCT---CCCTCCTTCCCTCTCTCCTTCC-----CTCCTC-CCTCCCTCCTTCCTTCCCCCCTT chr4 - 94230402 61964741 61964740 61964917 32265486 32265485 32265662 177 TCTCCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTA-TTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTGCATCCCCCCTT .::...::...:..x.:..-------..x.:xx...x::..:..x-..x:..:..::.....:........:...:.:...:..:.:.......x:xx.x.x.x.--:.........:---.:.:..::.:.x.x.....:x.-----......-..x:x....:.x.x......... 19M7I19M1D59M2I11M3I22M5I6M1I23M 107/159 67.3% 177/94230402 0.0% 19/159 11.9% 126251478 63963077 +3004 chr4 + 190214555 188216424 188216423 188216480 57 CCTCCCTCCTTCCCTCTCTCCTTCCCTCCTTCCCTCCCTCCTTCCCTCTCTCCTTCC chr4 - 94230402 69357097 69357096 69357153 24873250 24873249 24873306 57 CCTCCCTCTTTTCCCCGCTCCTTTCCTCCCCCCCCTTGTCACTCCCCCTTACTTTCC ........:..:..:.x......:.....::...:::x..x:....:..:x.:.... 57M 40/57 70.2% 57/94230402 0.0% 0/57 0.0% 118859327 71355228 +3135 chr4 + 190214555 188216456 188216455 188216512 57 CCTCCCTCCTTCCCTCTCTCCTTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCTCTCC chr4 - 94230402 69357097 69357096 69357153 24873250 24873249 24873306 57 CCTCCCTCTTTTCCCCGCTCCTTTCCTCCCCCCCCTTGTCACTCCCCCTTACTTTCC ........:..:..:.x......:.....::...::.x..x.....:.::x..:... 57M 41/57 71.9% 57/94230402 0.0% 0/57 0.0% 118859359 71355196 +3031 chr4 + 190214555 188216545 188216544 188216592 48 CTCCTTCCCTCTCTCCCTCCCTCTCTCCTTCCTTCTTTCTCTCTTTTC chr4 - 94230402 50697975 50697974 50698022 43532381 43532380 43532428 48 CTCCCCTCCTATTTCCTTTCCTCTCTCCTTCCTTCTCGTTCTCCTTTC ....:::...x.:...:.:.................:x:....:.... 48M 37/48 77.1% 48/94230402 0.0% 0/48 0.0% 137518570 52695985 +4777 chr4 + 190214555 188216555 188216554 188216756 202 CTCTCCCTCCCTCTCTCCTTCCTTCTTTCTCTCTTTTCTTCCCTCCTTCCCTCTCTCC-----CTCCTTCCTTCCTTACCCCCTTCCTTCCCTCTTTTCTTCTCTCCTT------------CCCTCCTTC-CCTCTCTCCTTCCCTCCCTC--CTTCCCTCTCTCCCTCCCTCTCTCCTTCCTTCCCTCTTTTCTTCCCTCCTTCTCTCTCTCCCTCCCTCC chr4 - 94230402 59424941 59424940 59425162 34805241 34805240 34805462 222 CTGTTTTCCTCTGCCTTCTTCCCTCATTTTCTCTTTTCTTTGGCACTTCAGTTTCCCCGTGTTTTACTTCCTCCTTTGTCCTGTCCCTGTGCTTTTCTTTTCATGCTTTATCATTCGTGCCCCATTTTTCACATTTTTTTTTCCCTTCCTCATCTTTCCCCACTCCCAGCCCTTCTCCTTCATTAAAGCTGTCACAGCCAGCTTCTCCCTCCTGCTTCCGCC ..x.::::.:..x:..:.....:..x..:...........:xx:x....xx.:..:..-----:.x......:.:..::..:x.:...x:x..:..:.:...x:x.:..------------..x.::...-.x.:.:.::......:....--...:..:.x.....xx..::........x..xxxx..x.:x:xx..xx......:...::x..:..x.. 58M5I46M12I9M1I20M2I69M 127/202 62.9% 222/94230402 0.0% 20/202 9.9% 128791614 61422941 +3512 chr4 + 190214555 188231508 188231507 188231644 137 ACACTCACATACA-TATACTCACATGCACATACTCACATACATACACTCACATACACACACTCACATACACACACTCACATACACACACTCACATACACGTACTCACATACATACACTCACATACACACACATACATA chr4 - 94230402 73121078 73121077 73121209 21109194 21109193 21109325 132 ACACCCACAGAAACTGTAATCTCGTGTGCATGC------ATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA ....:....x.x.-.:..x..x.:..::...:.------.:..x..:x......:.....xxx:...:x::...:x.::...x::....xx::...:::.x::x..:...x....:.:....x.x........::... 13M1I19M6D99M 82/131 62.6% 132/94230402 0.0% 7/131 5.3% 115110430 75104125 +3086 chr4 + 190214555 188233372 188233371 188233415 44 TCAAAAACAACAACAACAACCAGAAAAAAAAACTCCTGAAATAA chr4 - 94230402 28943671 28943670 28943714 65286689 65286688 65286732 44 TTAAAAACAACAACAACAACAAAAAAAAAAAACACCTAAACTAA .:..................x.:..........x...:..x... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 159289701 30924854 +3229 chr4 + 190214555 188244408 188244407 188244461 54 CTACGTTCATCCCTCTTTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTGACA chr4 - 94230402 40550293 40550292 40550346 53680057 53680056 53680110 54 CTATTTTCATTACTCTTTCCGCTCCTGTTTATTTCTTTTTTTTTTTTTTTGACA ...:x.....:x......::x:..:.x...x....................... 54M 43/54 79.6% 54/94230402 0.0% 0/54 0.0% 147694115 42520440 +3448 chr4 + 190214555 188249491 188249490 188249546 56 AAAAGAAAAAAAAAAGAGAGAGAGAGAGAGAAAATGACAACACAGATTTGGGAGAA chr4 - 94230402 87676347 87676346 87676402 6554001 6554000 6554056 56 AAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAATAACAAATCTGTTTTGATACAA ....:..........................:...:....xx.x.x....:x.x.. 56M 46/56 82.1% 56/94230402 0.0% 0/56 0.0% 100573144 89641411 +3392 chr4 + 190214555 188252022 188252021 188252104 83 CTGCAACCTCTGTCTTCCAAGTTCAGGAGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGATTACAGGCACCTGCCACTGTG chr4 - 94230402 18197126 18197125 18197206 76033197 76033196 76033277 81 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC--ACCACTGTG ..:..:..:xx:x....:::.....:.x.x...x.xx.x.........:...........:.:....x.::.--:........ 72M2D9M 57/81 70.4% 81/94230402 0.0% 2/81 2.5% 170054896 20159659 +3310 chr4 + 190214555 188261661 188261660 188261734 74 CTGCAACCTCCACCTCCTGATTTCAAGCAATTCTCCTGCCTCAGACTCCCGAATAGCTGGGACTACATGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x..:...:x......::x...x.xx.x.....x..::.:.:.......:......:...... 74M 51/74 68.9% 74/94230402 0.0% 0/74 0.0% 170064535 20150020 +3324 chr4 + 190214555 188271797 188271796 188271852 56 CCCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGA-GTTTTGCTCACA chr4 - 94230402 17623054 17623053 17623110 76607293 76607292 76607349 57 CCCTCCTCCCTCTTTTTTTTTTTCTATTTTATTTTTGAGGCAGAGGTTTTGCAGACA ....:..:.:.............:.x....x........:....-.......xx... 44M1I12M 47/56 83.9% 57/94230402 0.0% 1/56 1.8% 170648743 19565812 +3097 chr4 + 190214555 188274711 188274710 188274790 80 CTCCAGCCTGGGTGACAGAGCAAGACTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAAATCAAAG-AAGATAAATA chr4 - 94230402 29092632 29092631 29092712 65137691 65137690 65137771 81 CTTCAGTCATGGGGAAAGAGCAAGAATCCAAAAAAAAAAAAAAGGTAGAAAAACAGGGAAAGGGTCAAAGTAACttaaata ..:...:.xx..x..x.........x..:x.............::x.:.....x.::::x.:::......-..xx...... 70M1I10M 56/80 70.0% 81/94230402 0.0% 1/80 1.2% 159182079 31032476 +3086 chr4 + 190214555 188281874 188281873 188281936 63 TAGAAATATTTCTTTTTTTTTTCTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGTCCAGG chr4 - 94230402 3996911 3996910 3996973 90233430 90233429 90233492 63 TAGAATTATTGCCTTTTTTTTTTTTTTTTCTTTTTGTAATGGTGTTTCAAGCAGTAGTGTAAG .....x....x.:.........:......:......x:....x..:...xx.x..x..x:.:. 63M 47/63 74.6% 63/94230402 0.0% 0/63 0.0% 184284963 5929592 +3175 chr4 + 190214555 188300059 188300058 188300155 97 TGTCCAGTCCTTCAG-----AGTGCCCTGTTGTCCT--CTGCCGCTCCCATTTTTCTCCTGTGTGTGCCCTGTTCCCTCTGCTTCCTCAGATTCTCCTCCTCAG chr4 - 94230402 92185591 92185590 92185694 2044709 2044708 2044812 104 TGCCCTGTCCTTTGGTAGGAAACGAGCTGTGCTCCTGTCCTCGGCTCTCATTTTTGCCCTCTGTGTGCCTCACCTGCTTTGCTTTCTCAGATGCGTCCCCCCGG ..:..x......::.-----.::.xx....xx....--.:x.x....:.......x:...x........::::::x..:.....:.......x.x:.:..:.:. 15M5I16M2I66M 65/97 67.0% 104/94230402 0.0% 7/97 7.2% 96114468 94100087 +3058 chr4 + 190214555 188304000 188303999 188304065 66 AAAAAAGAAAAGAAAGAAAAGAAATAGCTGGAGAAAGCAGAACTGATGTGAGAAACAATAGATTCT chr4 - 94230402 29056434 29056433 29056499 65173904 65173903 65173969 66 AAAAAGAAAAAGAAAGAAAAGAAATAAATGAAGTAAATGAAATATATGTGCCAAATCATAATTTCT .....::...................:x..:..x..::::..:xx.....xx...:x...:x.... 66M 47/66 71.2% 66/94230402 0.0% 0/66 0.0% 159247566 30966989 +3142 chr4 + 190214555 188306430 188306429 188306514 85 GCAACAGAGAGACTCCGT---CTCAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAAAAGAAA------AGAAAAGAAAAGAAAGGAAAAAAAAA chr4 - 94230402 6332151 6332150 6332244 87898159 87898158 87898252 94 GCCACAGTCAGCCTCAGTGGCCTTAAAAAGAAAAGAAAAAGAAAAGAAAAACAGAATAGTAAGAATGCAGCATGAGACAGAAATGAAAATTAAA ..x....xx..x...x..---..:.....:....:................x....x..x..------..x.x:::.x.....x.....xx... 18M3I41M6I26M 65/85 76.5% 94/94230402 0.0% 9/85 10.6% 181974279 8240276 +3036 chr4 + 190214555 188306457 188306456 188306513 57 AAAAAAAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAAA chr4 - 94230402 72165101 72165100 72165157 22065246 22065245 22065302 57 AAAACAAAAACAAGAGAAAAAAAGAAAAAAACTTACAAGGAAAATAAGGAGAAAGAA ....x.....x..:..............:..xxx.x...:...:x.....:...:.. 57M 44/57 77.2% 57/94230402 0.0% 0/57 0.0% 116141356 74073199 +3276 chr4 + 190214555 188306462 188306461 188306530 69 AAAAAGAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGGAAAAAAAAAGTTTTAATCTAATGCC chr4 - 94230402 19107573 19107572 19107641 75122762 75122761 75122830 69 AAAGGGGAAAAAATGAAGGAAATAAGGAGAGAAGATAATAAAAGTTAAAAAAAATTTTAATCAAATGTC ...::.:...:..x:..:....x:.::...:....x..x...:.xx.......:........x....:. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 169198889 21015666 +3485 chr4 + 190214555 188308437 188308436 188308507 71 CAAAGTTGAGTTTTTGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTTTCTTGAGACAGAATCTCGCTCT chr4 - 94230402 89666543 89666542 89666613 4563790 4563789 4563860 71 CAGAGTTGATTTTTTTTTGTTGTTGTTGCTGTTTGTATTTTTTTTTTTTTGTTAGAAAACAATTTTTTTCT ..:......x.....x............:.x.....x.x...x.......x..:::.x.x...:.:x:... 71M 53/71 74.6% 71/94230402 0.0% 0/71 0.0% 98641894 91572661 +3292 chr4 + 190214555 188312335 188312334 188312399 65 AGTTACTCAG---TTTTCTTCTCTTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 7586119 7586118 7586186 86644217 86644216 86644284 68 AGTTAGTTAGACTTTTTCTTAGCTTTTTTCTTTTCTTCCTTCTTTTCTAATTGCTTCATTTTTTTTTT .....x.:..---.......xx...............:...::.....xx..x:..:x.......... 10M3I55M 52/65 80.0% 68/94230402 0.0% 3/65 4.6% 180726216 9488339 +3033 chr4 + 190214555 188312466 188312465 188312539 74 CTGCACTCTCAACCTGCCAGGCTCAAGCAATTCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..x:.:x..x..x.::..:.....::x...x.xx:x........::::.........:...:..x...... 74M 49/74 66.2% 74/94230402 0.0% 0/74 0.0% 170115340 20099215 +3453 chr4 + 190214555 188330225 188330224 188330296 72 CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGAATTACAGGTGC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx:x..:.::..........x...x.xx.x......:.::.:...........:....x.... 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 170133099 20081456 +3061 chr4 + 190214555 188333436 188333435 188333510 75 AGAGCCAGACTCCGTCTCAAAA---AAAAAAAAAAAAAAAGAAAAGAAAGAAAGCAAAGGAGGAGCTCGTAAGCCCAG chr4 - 94230402 58209812 58209811 58209889 36020514 36020513 36020591 78 AAATCCAGGTTCCTCTGCACAGCTTAAAAAAAAAAAAAAACAGAGGAAAAATAGCAGAAAAAAAGCTTGTGACCCCAG .:.x....::...x::x..x.:---...............x.:.:....:.x....:.::.::....:..:.x..... 22M3I53M 52/75 69.3% 78/94230402 0.0% 3/75 4.0% 130123624 60090931 +3217 chr4 + 190214555 188336174 188336173 188336251 78 CACTATGGACCTTGTTTCCATTCCACACTTTCTCTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 40193292 40193291 40193369 54037034 54037033 54037111 78 CATTATTGGAGTTGTTTCATCTTTTCTCTCTCTATCTTTTACTCCTCAACCTTCACTTTTTTTTTTTTTTTTCTTTTT ..:...x.:xx.......xx:.::x.x..:...x....:.x..:..:xx:....x:................:..... 78M 54/78 69.2% 78/94230402 0.0% 0/78 0.0% 148142882 42071673 +4150 chr4 + 190214555 188351560 188351559 188351633 74 CTGCAACCTCCACTTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAC chr4 - 94230402 18197126 18197125 18197199 76033204 76033203 76033277 74 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGCAC ..:..:..:xx.x:.:.............x...x.xx.x........::...........:......x...... 74M 57/74 77.0% 74/94230402 0.0% 0/74 0.0% 170154434 20060121 +3524 chr4 + 190214555 188352011 188352010 188352147 137 GTTGTAAATGAAATAATTTCTTTCTTTTTCTTTTTTTCTTTCTTTTTTTTTTAAGGC---TGAAGAACATTCCATTGTGTGTA-----TATATCTCATTTTCTTTTTCCA----TTTATCCATTGATTGACACTTAGATTGATTCCATG chr4 - 94230402 61339840 61339839 61339985 32890418 32890417 32890563 146 GTTGTGAATGAAATAATTTCATTTCTCATGGTTTTTTGTTTTTTTTTTTCATAAATCTATTGAAGGAAAT---ATGGTTTGTAAAAACTGTAACACAATTTCCCATTTCAGAATTCTGTCCATGGAGCATCACTGAACTGTTTTCCACG .....:..............x..::.:x.xx......x...:.......:x...:x.---.....:.x..---..x..x....-----.:..x.x..x....::x..:..----.:.:.....x..x::x....x.:x.xxx.....:. 57M3I10M3D10M5I22M4I35M 94/134 70.1% 146/94230402 0.0% 15/134 11.2% 127012171 63202384 +3089 chr4 + 190214555 188352475 188352474 188352542 68 TATATATATATATATATATATATATATATATATATGTATATATGTTGGCCATTTGCATGTCTTATTTT chr4 - 94230402 50941876 50941875 50941943 43288460 43288459 43288527 68 TATATATGCACAAACACATATATGCATTTATACATGTATATATTTTGAATACATACGTATTCTACTTT .......::.:.x.:.:......::..x....:..........x...:x:.:x.:.:.:.::..:... 68M 46/68 67.6% 68/94230402 0.0% 0/68 0.0% 137410599 52803956 +3287 chr4 + 190214555 188366618 188366617 188366694 77 TGATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACATTAT chr4 - 94230402 14964811 14964810 14964887 79265516 79265515 79265592 77 TGTTGTGGACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACACTGT ..x.:.:x.:.:.x....:.x.:::.:.::.:.::.:...:......:.xx........::............:.:. 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 173401807 16812748 +3306 chr4 + 190214555 188366620 188366619 188366686 67 ATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACA chr4 - 94230402 8395796 8395795 8395862 85834541 85834540 85834607 67 ATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ..:.:.::...x.:..:...x..:....:...::x..:..xx...:.:.............x..... 67M 48/67 71.6% 67/94230402 0.0% 0/67 0.0% 179970824 10243731 +3596 chr4 + 190214555 188366621 188366620 188366691 71 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACAT chr4 - 94230402 8395795 8395794 8395865 85834538 85834537 85834608 71 TATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAAT ...:.:.::...x.:..:...x..:....:...::x..:..xx...:...............x.....x.. 71M 52/71 73.2% 71/94230402 0.0% 0/71 0.0% 179970826 10243729 +3719 chr4 + 190214555 188366621 188366620 188366690 70 TATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACA chr4 - 94230402 8395793 8395792 8395862 85834541 85834540 85834610 70 TGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA .:...:.:.::...x.:..:...x..:....:...::x..:..xx...................x..... 70M 52/70 74.3% 70/94230402 0.0% 0/70 0.0% 179970828 10243727 +3062 chr4 + 190214555 188366624 188366623 188366689 66 ATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACAC chr4 - 94230402 14964819 14964818 14964884 79265519 79265518 79265584 66 ACACAAATATGTTTGCGTGTGCACACGTGTATGTATATACAGCCACACACATGCACACACACACAC .:.:.x....:.x.:::.:.::.:.::.:...:......:.xx:.......::............. 66M 44/66 66.7% 66/94230402 0.0% 0/66 0.0% 173401805 16812750 +3180 chr4 + 190214555 188366633 188366632 188366720 88 TATATATATATATATATATATATATATATATATATACACACACACACACACACACACATTATATATATATATATATACACACATATAT chr4 - 94230402 88147180 88147179 88147253 6083150 6083149 6083223 74 TACATGTAAGAATATATATATATATGTTTGTGTATGCGCACACACACACAC--------------CATATATAGGGAGAAGCATATAT ..:..:..x:x..............:.x.:.:...:.:.............--------------:.......x:x.x.x:....... 51M14D23M 56/74 75.7% 74/94230402 0.0% 14/74 18.9% 100219453 89995102 +3070 chr4 + 190214555 188397006 188397005 188397068 63 AAAAATATATATATATATATATAC--------ACACACACACACACACACACACACATATATATATAGAAC chr4 - 94230402 8395806 8395805 8395876 85834527 85834526 85834597 71 AAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACAAATGAATAAAAAAC ...x..:...x..:....:...:.--------.:.................x.....x..:x...x.:... 24M8I39M 50/63 79.4% 71/94230402 0.0% 8/63 12.7% 180001200 10213355 +4076 chr4 + 190214555 188403539 188403538 188403617 79 GTGGCGATTGTTTCATTATTTTGCATTCTTTTGTTGTTGTTGTTTTTTGTTGTTTTTTTTTGTTTGTTTTTTGTTTTTC chr4 - 94230402 50739007 50739006 50739085 43491318 43491317 43491396 79 GTGGTGCTTGGCACATATTTTTCTATTTGTTTGTTGTTGTTGTTGTTTGTTGGTTTTGTTTGTTTAAATTTTGTTCTTC ....:.x...x:x...xx....x:...:x...............x.......x....x.......:xx.......:... 79M 61/79 77.2% 79/94230402 0.0% 0/79 0.0% 137664532 52550023 +3367 chr4 + 190214555 188403576 188403575 188403632 57 TGTTGTTTTTTGTTGTTTTTTTTTGTTTGTTTTTTGTTTTTCGTGTTTTTTTTGAGA chr4 - 94230402 60157768 60157767 60157824 34072579 34072578 34072635 57 TACTGTTTTTTGTTGCTGCTTTTTGTTTATTTTTTGTTTCTTGTTTTTCTCTCAAAA .::............:.x:.........:..........:.:..x...:.:.::.:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 128245808 61968747 +3759 chr4 + 190214555 188414386 188414385 188414489 104 GACAGAACACACGCACATATATACACACACACACACCCACACCCTGGCGCACACACACACATCCACACACACATATATGTGCACACATACACACACACACACAC chr4 - 94230402 89016076 89016075 89016171 5214232 5214231 5214327 96 GGCAGGATGTGCACACATCTGCATGCACACACACGT--------TTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACAC .:...:.::::.:.....x.::.::.........::--------.x...........::..xx::..:....:..x.....::::..x....x::.:....... 36M8D60M 63/96 65.6% 96/94230402 0.0% 8/96 8.3% 99398310 90816245 +3025 chr4 + 190214555 188435296 188435295 188435368 73 AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAGAAAAGAAAAGAAAACAGAAAAGCTCT chr4 - 94230402 20475871 20475870 20475943 73754460 73754459 73754532 73 AAAAAAAAAAAAAAAAAAAGAAGGAAGTAAGGTAGGAAGACATACAGGAACATAAAAGGAACATAAATTCTTT ...................:..:...:x..:.x.:...:.x:x.x..:..x:x...:::....x...xx..:. 73M 50/73 68.5% 73/94230402 0.0% 0/73 0.0% 167959425 22255130 +3136 chr4 + 190214555 188450397 188450396 188450453 57 CGATATATATACACATCACATATACACACACACATATACGTATATATACACATATAT chr4 - 94230402 84365844 84365843 84365900 9864503 9864502 9864559 57 CAAAATGTATATAATTCCCATCCACACACATGCATATATGTATACATACACATATGT .:.x..:....:.xx..x...x:.......::......:.....:..........:. 57M 43/57 75.4% 57/94230402 0.0% 0/57 0.0% 104084553 86130002 +3052 chr4 + 190214555 188454491 188454490 188454545 55 ATACTTGCACACACACAGACACACACACACACACACACAGACACACACACACACA chr4 - 94230402 33416700 33416699 33416754 60813649 60813648 60813703 55 ATGTTTACGCATTCCCAGACACACACATACACACACAAGGACACACTGAGACACA ..::..:.:..:x.x............:.........x:.......xx.x..... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 155037791 35176764 +3194 chr4 + 190214555 188527454 188527453 188527522 69 AGACTTTGAAAAAAAACAAACAAAAAAAAAACCAAAAGAAAGAAAGAAAGTGAGAGAGAGAGAGAGAAA chr4 - 94230402 78791790 78791789 78791858 15438545 15438544 15438613 69 AAACATTAAACAAAACAAAACAAACAACTGTCCAAAGGAAAAAAAAAAAGAGAGAGAGAGAAATGAAAA .:..x..:..x....xx.......x..xx:x.....:....:...:....x..........:.x::... 69M 50/69 72.5% 69/94230402 0.0% 0/69 0.0% 109735664 80478891 +3018 chr4 + 190214555 188527457 188527456 188527505 49 CTTTGAAAAAAAACAAACAAAAAAAAAACCAAAAGAAAGAAAGAAAGTG chr4 - 94230402 44421416 44421415 44421464 49808939 49808938 49808987 49 CTGTTAGAAGAAACAAACAAAAAAAAAAACACAAGAAAGAAAGGGATTG ..x.x.:..:..................x..x...........::.x.. 49M 40/49 81.6% 49/94230402 0.0% 0/49 0.0% 144106041 46108514 +3222 chr4 + 190214555 188554251 188554250 188554290 40 TGTGTGTGTGTTTGTGTGAGAGAGAGAGAGAGAAAGAGAG chr4 - 94230402 18982315 18982314 18982354 75248049 75248048 75248088 40 tGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGGAAG ...........x.....................:..::.. 40M 36/40 90.0% 40/94230402 0.0% 0/40 0.0% 169571936 20642619 +3003 chr4 + 190214555 188590467 188590466 188590510 44 TCATGCATTTATTTAATAAATATATATATATACACACACACACA chr4 - 94230402 53014887 53014886 53014930 41215473 41215472 41215516 44 TCATGCATTTCCCTTATATATCTATATATATACACACACACACA ..........x::.x...x..x...................... 44M 38/44 86.4% 44/94230402 0.0% 0/44 0.0% 135575580 54638975 +3030 chr4 + 190214555 188656693 188656692 188656761 69 CACCTATGCCTCAGAGAGGGTCTTTTTCTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT chr4 - 94230402 86443895 86443894 86443963 7786440 7786439 7786508 69 CACCTTAATTTCACAAAGGCTTTGGATGTTTCCTTTTTTTTTTCTGTCTCTCTTTTATTTTTTTTCCTT .....xx:::...x.:...x.:.xxx.x...:.....:.......x...:......x........::.. 69M 49/69 71.0% 69/94230402 0.0% 0/69 0.0% 102212798 88001757 +3024 chr4 + 190214555 188656713 188656712 188656767 55 TCTTTTTCTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGA chr4 - 94230402 39136250 39136249 39136304 55094099 55094098 55094153 55 TCTTTGTGTTTTTTAATCTGTTTCTTTCTTTCTTTTTTTTTTTTGTCCTTGTGGA .....x.x....:.xx...x........................x.::..x.x.. 55M 44/55 80.0% 55/94230402 0.0% 0/55 0.0% 149520463 40694092 +3084 chr4 + 190214555 188677844 188677843 188677912 69 CAAAATTGACAAGTGGGATCTAATTAAACTAAAGAGCTTCTGTGCAGCAAAAGAAACTAGCATCAGAGT chr4 - 94230402 41449893 41449892 41449958 52780445 52780444 52780510 66 CAAAATTGACAAATAGGCTGGACCTGAACTAAGGAGCCTCTGTGCAGC---AGCAAGTGATGTTAGAGT ............:.:..x.xx.x:.:......:....:..........---..x..x.::::.:..... 48M3D18M 49/66 74.2% 66/94230402 0.0% 3/66 4.5% 147227951 42986604 +3363 chr4 + 190214555 188686432 188686431 188686512 81 AAAAAAAGTGTCACATGGTTTTAAACACACACACACACACACATATATATATATATATATATATATATATATATTTTTGAG chr4 - 94230402 87372733 87372732 87372801 6857602 6857601 6857670 69 AAAAAAATTAT-------TTCCAAACACACACACAGACACACACATCTATACGTATGTACGTATATAT-----TTCTTGAG .......x.:.-------..::.............x.......:..x....::...:..::.......-----..:..... 11M7D50M5D8M 56/69 81.2% 69/94230402 0.0% 12/69 17.4% 101313699 88900856 +3050 chr4 + 190214555 188694704 188694703 188694760 57 AAAAAAAAAAAAAAAAGAAATATATATATATATATATGTATTCAATTAATATTTTTG chr4 - 94230402 69437739 69437738 69437795 24792608 24792607 24792664 57 AAAAAAAAACAAAAAAAACCTATATATATATATATATATCTTACATAAGTAATTCTG .........x......:.xx.................:.x..xx..x.:..x..:.. 57M 45/57 78.9% 57/94230402 0.0% 0/57 0.0% 119256965 70957590 +3361 chr4 + 190214555 188716215 188716214 188716286 72 CTGCAACCTCCACCTCCTGAGTTCAAGAGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCAC chr4 - 94230402 18197126 18197125 18197197 76033206 76033205 76033277 72 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:..:..:xx.x..:...:.......x.x...x.xx.x........:..:.........:.:....x.::. 72M 51/72 70.8% 72/94230402 0.0% 0/72 0.0% 170519089 19695466 +3198 chr4 + 190214555 188735454 188735453 188735520 67 TCTCTCTCTCTTCCCCTCCCTCCCTCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCTT chr4 - 94230402 51457788 51457787 51457854 42772549 42772548 42772615 67 TCTCTTTCTGTATCCATCCATCTCTTTCTCCCCCTACCACACTCCATCTCTTCCTTTCTTTTTCCCT .....:...x.x:..x...x..:..:..:.:....x..x.x....x..:.......:...::.:.:. 67M 47/67 70.1% 67/94230402 0.0% 0/67 0.0% 137277666 52936889 +3786 chr4 + 190214555 188763873 188763872 188763979 107 CACACATATGTATACACACATACATACA--CATGTGTAC--ACGTATATATACACATGTATACACACGTGTATATATACACATATGTATACACACACGTATATATACATAT chr4 - 94230402 73121106 73121105 73121216 21109187 21109186 21109297 111 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCAAAT ..::.....x:.......:.....:.x.--....x....--.......x:.....:x.....::::x..::.....x.:..::x:::.x.x......:.:....x:..x.. 28M2I9M2I70M 73/107 68.2% 111/94230402 0.0% 4/107 3.7% 115642767 74571788 +3618 chr4 + 190214555 188763877 188763876 188763986 110 CATATGTATACACACATACATACACATGTGTACACGTATATATACACATGTATACACACGTGTATATATACACATATGTATACACACACGTATATATACATATGTACACA chr4 - 94230402 73121106 73121105 73121213 21109190 21109189 21109297 108 CATGCATATTCATACACATATACACAGAAG--CATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ...:::...x..:...:.:.......x:x.--..:.x:..:....::..:x:.....:x..:...:.:x::......:x....:.x...:x.x.:.:....:.:..x:.. 30M2D78M 68/108 63.0% 108/94230402 0.0% 2/108 1.9% 115642771 74571784 +3769 chr4 + 190214555 188763940 188763939 188764083 144 ATATATACACATATGTATACACACACGTATATATACATATGTACACACACATATATACACATATATGTATACACACGTATATACACATATGTATACACACGCATATATACATATATGTACACACACA-------TATACACATGCACACAC chr4 - 94230402 89016082 89016081 89016222 5214181 5214180 5214321 141 ATGTGCACACATCTGCATGCACACAC--------ACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACAC--TTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCACTGCTGCTGTGCCCATATCCACAC ..:.::......x..:..:.......--------..:.x..::.........::.x.::....:.:...x.:::::..::.x....--x..:::.......x..:::.:.x:..:x.:....x::..-------.:.:.x...::x..... 26M8D52M2D39M7I17M 85/134 63.4% 141/94230402 0.0% 17/134 12.7% 99747858 90466697 +3281 chr4 + 190214555 188763970 188763969 188764033 64 ATATACATATGTACACACACATATATACACATATATGTATACACACGTATATACA--CATATGTAT chr4 - 94230402 66904847 66904846 66904912 27325491 27325490 27325556 66 ATATATGTACGTACACACACATACACACACACATATTTAAGTTCAGGTGTATACAATCATACGCAT .....::..:.............:.:.....:....x..x::x..x..:......--....:.:.. 55M2I9M 49/64 76.6% 66/94230402 0.0% 2/64 3.1% 121859123 68355432 +3442 chr4 + 190214555 188763979 188763978 188764106 128 TGTACACACACATA-------------TATACACATATATGTATACACACGTATATACACA----TATGTATACACACGCATATATACA----TATATGTACACACACATATACACATGCACACACACATATATACACATGTATACACA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAACTGTAATCTCGTGTGCATGCATATTCATACAC----ATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAA------TACGCCCACAGAGACACACATGTATAAGCA .......x....x.-------------.:.:..:::....x:......----.........----:...x:....:...:...x:....----.......:x::...:...x.------:..:.x....x.x.:...........x:.. 14M13I21M4D9M4I24M4I20M6D30M 88/118 74.6% 139/94230402 0.0% 31/118 26.3% 115642904 74571651 +3103 chr4 + 190214555 188764004 188764003 188764078 75 ATGTATACACACGTATATACACATATGTATACACACGCATATATACATATATGTACACACACATATACACATGCA chr4 - 94230402 8395788 8395787 8395862 85834541 85834540 85834615 75 ATGTGTGTATGTGTGCATAAACATGTATTTACATATGTATGCCTACATTAATACACACACACACACACAGACACA ....:.::.:::..::...x....:.:.x....:.:.:..::x.....xx..::.........:.:...x.::.. 75M 48/75 64.0% 75/94230402 0.0% 0/75 0.0% 180368216 9846339 +3262 chr4 + 190214555 188764010 188764009 188764073 64 ACACACGTATATACACATATGTATACACACGCATATATACATATATGTACACACACATATACAC chr4 - 94230402 7596413 7596412 7596476 86633927 86633926 86633990 64 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGC .:...x:.::.....x..:.:.............:......x.:..:...x:..:..:::..:. 64M 45/64 70.3% 64/94230402 0.0% 0/64 0.0% 181167597 9046958 +3001 chr4 + 190214555 188764109 188764108 188764167 59 TATATACACATATGTATACACACATATACACATATGTATACACACATGTATACACATAT chr4 - 94230402 31366821 31366820 31366879 62863524 62863523 62863582 59 TATAGACAAAAAAGTGTGTGCACATGTAAATAAATGTGTACACACATGTATAGATATAT ....x...x.x.x..:.:::.....:..x.:.x....:..............x.:.... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 157397288 32817267 +3029 chr4 + 190214555 188764123 188764122 188764189 67 TATACACACATATACACATATGTATACACACATGTATACACATATATACTCATATGTATACACACAT chr4 - 94230402 7596414 7596413 7596480 86633923 86633922 86633989 67 TACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCACGCTCAT ..:.x.::....:.x.::...:..:....:..........x.:.......:.:::::::..:.x... 67M 44/67 65.7% 67/94230402 0.0% 0/67 0.0% 181167709 9046846 +4152 chr4 + 190214555 188764155 188764154 188764292 138 TGTATACACATATATACTCATATGTATACACACATATACACATATGTATACACACATACACATATGTATACACACATATATACATGTATATGCACACATAT--ATACATATGTATA----CACATATATACACATGTATATGCA chr4 - 94230402 73121075 73121074 73121213 21109190 21109189 21109328 139 TGTACACCCACAGAAACT-----GTAATCTCGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATAAGCA ....:..x..:.x.x...-----...xx.x.:::.::.::.....x:.......:.......x.x.:..:x::.....::..:.x...:.:.x::.:..:.--:.......:x...----....x.x.:...........x... 18M5D78M2I13M4I24M 90/133 67.7% 139/94230402 0.0% 11/133 8.3% 115643080 74571475 +3074 chr4 + 190214555 188764184 188764183 188764238 55 ACACATATACACATATGTATACACACATACACATATGTATACACACATATATACA chr4 - 94230402 53842130 53842129 53842184 40388219 40388218 40388273 55 ACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACA .....xx.......x.....:....:..:..:.:.....x.:.x...:...:... 55M 42/55 76.4% 55/94230402 0.0% 0/55 0.0% 134922054 55292501 +3615 chr4 + 190214555 188764186 188764185 188764305 120 ACATATACACATATGTATACACACATACACATATGTATACACACATATATACATGTATATGCACACATATATACATATGTATACACATATATACACATGTATATGCACACATACATACAC chr4 - 94230402 89016082 89016081 89016193 5214210 5214209 5214321 112 ATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCAT--------ACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACAC .::.::......x..:..:......:..::x.::.:.:.....:::.x..:...--------....:..x..:::.:..:.x....x.::::.....:.x..::.::.x...:x::.... 54M8D58M 68/112 60.7% 112/94230402 0.0% 8/112 7.1% 99748104 90466451 +3472 chr4 + 190214555 188764197 188764196 188764260 64 TATGTATACACACATACACATATGTATACACACATATATACATGTATATGCACACATATATACA chr4 - 94230402 53842123 53842122 53842186 40388217 40388216 40388280 64 TATAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACA ...:xx......xx.......x.....:....:..::.........x..:x.......:.:... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 134922074 55292481 +3492 chr4 + 190214555 188764241 188764240 188764304 64 TATATGCACACATATATACATATGTATACACATATATACACATGTATATGCACACATACATACA chr4 - 94230402 53842123 53842122 53842186 40388217 40388216 40388280 64 TATAGTTACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACA ....xx:.....xx..:....x.....:.......::.:.......x..:x.........:... 64M 49/64 76.6% 64/94230402 0.0% 0/64 0.0% 134922118 55292437 +3093 chr4 + 190214555 188764266 188764265 188764326 61 ATACACATATATACACATGTATATGCACACATACATACACATATGTATACACACATACACA chr4 - 94230402 7596413 7596412 7596473 86633930 86633929 86633990 61 ATACAGATGCATACAAATGTATATACACACGCATGTATACAAACATATACTTACGCACGCA .....x..::.....x........:.....::.::..:...x.::.....x:..::..:.. 61M 43/61 70.5% 61/94230402 0.0% 0/61 0.0% 181167853 9046702 +3713 chr4 + 190214555 188764281 188764280 188764388 108 CATGTATATGCACACATACATACACATATGTATACACACATACACATATGTATATGCACGCACATACACATATATAAACACATATTTATACACACACACATATGTATA chr4 - 94230402 73121106 73121105 73121209 21109194 21109193 21109297 104 CATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACG----CCCACAGAGACACACATGTATA ....:....x..:...:.:.......x.x.:..:x::......::...x...:.:.x::::.::.:x::.:.......:..:----:x:...x.x.....:....... 82M4D22M 67/104 64.4% 104/94230402 0.0% 4/104 3.8% 115643175 74571380 +3105 chr4 + 190214555 188764294 188764293 188764358 65 ACATACATACACATATGTATACACACATACACATATGTATATGCACGCACATACACATATATAAA chr4 - 94230402 53842130 53842129 53842194 40388209 40388208 40388273 65 ACACAGTTACACATTTGTATGCACATATGCATACATGTAGATAGACACATACACACAAAACTAAA ...:.xx.......x.....:....:..:..:.:.....x..:x..:..:.:.....x.xx.... 65M 47/65 72.3% 65/94230402 0.0% 0/65 0.0% 134922164 55292391 +3349 chr4 + 190214555 188764295 188764294 188764394 100 CATACATACACATATGTATACACACATACACATATGTATATGCACGCACATACA----------CATATATAAACACATATTTATACACACACACATATGTATATATATA chr4 - 94230402 73121100 73121099 73121209 21109194 21109193 21109303 110 CGTGTGCATGCATATTCATACACATATACACAGAAGCATGAGTACATACGTATAGGTACACGAGTATATGTGAGTACATATAAATACGCCCACAGAGACACACATGTATA .:.::::.::.....x:.......:.......x.x.:..:x.:..::..:..:.----------:....:.:.::......xx....:.x....x.x.:::.:..:.... 54M10I46M 64/100 64.0% 110/94230402 0.0% 10/100 10.0% 115643195 74571360 +3004 chr4 + 190214555 188770179 188770178 188770223 45 TGTATGTATGTATATATACACATACACACATATGTGTGTGTATAC chr4 - 94230402 64433220 64433219 64433264 29797139 29797138 29797183 45 TGTGTGTATATATATCTACACATACACACGCATACGTATGTATGC ...:.....:.....x.............::..::..:.....:. 45M 36/45 80.0% 45/94230402 0.0% 0/45 0.0% 124336959 65877596 +3219 chr4 + 190214555 188793273 188793272 188793373 101 TAAATGTGTATATACATGTGTGTATATGTGTGTATACATGTATATATATATATGTTTGACCTTCTCCATACATTTAAAAAATTAAATTGTAGTATTTATTG chr4 - 94230402 48089499 48089498 48089576 46140827 46140826 46140904 78 TAAGTCTGTATATACACGTGTGTGTATGTGAGAGTGTGTGTATATATAT-------------------TACAC----AAAATAATAGTGTAACATTTATTG ...:.x..........:......:......x.x:.:::...........-------------------....:----.....x.x.x....::........ 49M19D5M4D24M 62/78 79.5% 78/94230402 0.0% 23/78 29.5% 140703774 49510781 +3708 chr4 + 190214555 188867700 188867699 188867850 151 CTGTTATTTTCATTGATTTCCTTATTGTTTTCATTGATTACCTGCAGCATTTGAAACACTTGCCTTCATTCCTTTTTGAAACATGTC--------CTTCTCCCTTTTCTTTCTTTTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC chr4 - 94230402 92729569 92729568 92729701 1500702 1500701 1500834 133 cttctatttccattttctttcttttttttttc---------------catttt-----ccttcctttATTCCCCT------CATATCACCCCCTATTTCTCCTTTTCCTGTTTTTTTCCTCCTTCCCCTCACTTCTTCCCCCCACCTTTCTTCTCTTCC ..x:.....:....xx:..:...x..x.....---------------.....x-----.:.x....:.....::.------...:..--------:......:...:..x.:........:.:....::.x:::..:..:...x..:.:.:..:..:.. 32M15D6M5D17M6D6M8I64M 88/125 70.4% 133/94230402 0.0% 34/125 27.2% 96138131 94076424 +3687 chr4 + 190214555 188867762 188867761 188867908 147 CCTTCATTCCTTTTTGAAACATGTCCTTCTCCCTTTTCTTTCTT--TTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC------CTTCCTTCCTCCCTCCCT---CCCTCCCTTTCTTCCTTCCTTC-----CTTCTTTCCTTACTGCCTG chr4 - 94230402 61964744 61964743 61964906 32265497 32265496 32265659 163 CCTTTTTCTCTGTTTCAAATCAGCTGCTGACCTGTTTCTCTATTATTTTCCTTCTTCCCTCCCTCTCCTCTCCTCTCTTTTCTTCCTTCCACTGCACGTGCATTCTCCTTCCCCGGGCTCCCCCCCTCACACTCCTCACAAAGGCTCCTCTCCATGCTCCCTG ....:x.::..x...x...:xx.::x:.xx..:x.....:.x..--........:..........:.::.::.:...::.:.:...:...------.x.x.x.:....:....:---.:.:...::..x:x..:.::x.-----..:..:...x.:..x.... 44M2I44M6I18M3I22M5I19M 94/147 63.9% 163/94230402 0.0% 16/147 10.9% 126903018 63311537 +3870 chr4 + 190214555 188912762 188912761 188912840 79 CTGCAACCTCCATCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCACCCACCAC chr4 - 94230402 18197126 18197125 18197202 76033201 76033200 76033277 77 CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA--CGTGCACCAC ..:..:..:xx.x..:.:...........x...x.xx.x.........:...........:......--.::x...... 67M2D10M 59/77 76.6% 77/94230402 0.0% 2/77 2.6% 170715636 19498919 +4116 chr4 + 190214555 188919638 188919637 188919889 252 AAGGAAAATAACATTCTGATAAATTATGCTCAATTCACAATTTATCCAGGCATTCTAGAAGAGTATAATAATTATTTCCATTGATGCCAAATGTCTTCTGAAGAAAGGTA-TGTCAATTCAGCTTAATTTTATATTTTATTATAAAATCTTTCCAAAA--ACAGAAAG----------------ATTAAATTAATATGAGACATATCCTTCGACTTTGGTCTTCACAAATAATTAAAAATAAAAAATGGGATTTTGAGTAAGACTTTTGAT chr4 - 94230402 29991120 29991119 29991375 64239028 64239027 64239283 256 AATGAAAAAAAAATTGAAATAGAATATGTTTTCTTTAGATTTAGAATATGCTT------AGAATTTCAGAAATATTTGCATTAACATTACAC----TTTGAATATAGATAACAACAATTTGAATATAGATAACATATTGTTGTA-----TTACCAAAACAAAAGAAAGCGGTTGAACTGAGAGAACTAAGTTTATATCAAATGTATAATTACTCTCTGGTCTCCAGAAGTAATTAAAACTGAAAAATATGACTGCAAATGAGCCTTTTGAT ..x.....x..x...xx:...:.x....:.:xx..:.x.x..x:xx:.x..x.------...:.x.x.x..x.....x....:.::::.x.:----.:....x.x..:..-::x.....:::x.xx.xx.x.:..x..:..:..-----..x......--.x......----------------.:...:..x....x.:.::...xx..xxx..:......:..x..:.........x.:......:x..:.x::.:.:..x........ 53M6D33M4D14M1I33M5D9M2I8M16I87M 153/237 64.6% 256/94230402 0.0% 34/237 14.3% 158928518 31286037 +3060 chr4 + 190214555 188960225 188960224 188960287 63 AAAGACATGTTTTAAAAGATTACCTTCCTTTCTTCTTTCTTCTCTCTTCCTCCTTCCTTTTTT chr4 - 94230402 52242939 52242938 52243001 41987402 41987401 41987464 63 AAAGATCTGCTTTAAAGGATTAGTTTGATTTCTTCTTTTTTTTTTTTTTTTGCTTTCACTTTT .....:x..:......:.....x:..xx..........:..:.:.:..::.x...:.x:.... 63M 45/63 71.4% 63/94230402 0.0% 0/63 0.0% 136717286 53497269 +3027 chr4 + 190214555 188971557 188971556 188971597 41 TGTAGCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 45399587 45399586 45399627 48830776 48830775 48830816 41 TGGATCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTCCTTCT ..x.x..............................::..:. 41M 36/41 87.8% 41/94230402 0.0% 0/41 0.0% 143571970 46642585 +3024 chr4 + 190214555 188971560 188971559 188971597 38 AGCTTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 18929910 18929909 18929947 75300456 75300455 75300493 38 AATTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTT .::..............:.:.................. 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 170041650 20172905 +3015 chr4 + 190214555 188971570 188971569 188971626 57 TCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTC---TGTTGCTCAG chr4 - 94230402 5847643 5847642 5847702 88382701 88382700 88382760 60 TCTATGCTTTTTTTTTTTTTTCTCCTTTTTGAGAGGCTGTCTTGCTCCTTTGCTGCTCAG ...x.x:..............:.::.........x:xx.........---..:....... 47M3I10M 46/57 80.7% 60/94230402 0.0% 3/57 5.3% 183123927 7090628 +3047 chr4 + 190214555 188987465 188987464 188987523 59 CTCGTGGGTTCTAGCAATTCTCGCAGCTCAGCCTCCCGAGTAGCTGGGATTACATGTAC chr4 - 94230402 18197139 18197138 18197197 76033206 76033205 76033264 59 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ..:x.......x..::x...x.:x:.........::.:.........:.:....:..:. 59M 42/59 71.2% 59/94230402 0.0% 0/59 0.0% 170790326 19424229 +9313 chr4 + 190214555 189005747 189005746 189006195 449 CTGCATGTGAGGACAGAAATAAATCATATCAGATCAGAAGGTCTACTAGTTAACAGCTAAAAAAGAGGATTGTAGTATTTTCCCTTCGTTTTAGTCTAAACTCTCTCTAGAGGGTAGGTAGTGTAATAGGAGCAGGTAACTTTGTCCGTGTACAAATTTTCATGTGTTTTACATCTAGACTTTGAAACCTT--GCTCATCATTTTCCTTCAGGTCCCATTCATAAATCTGACATTTATAAATTTAAGAATCAAAT---------TGCAGATCATTTAAAGCTAGATGTGTAGGCTGAATTGTGAACTCATGATGAGACGAGCTTGCACTGAGATTGGGAGTGTACAGTTTTCATATTGCAGAAAATGCAA-CTAAAC-----------TTTTTGC--CACTTGATTCAATAGGAAATAAAAT-----GATATAGGATTAGTTTGAAGATGCAAACTGA-TTTCAGTGAATATTCATCATT chr4 - 94230402 29964219 29964218 29964677 64265726 64265725 64266184 459 CTCCATATGGAG-CAGTAATAGATCACTGGGGACCAAAAA-------AAAAAAAAGGTTGAAAAGGTGACAGGAGTATTTTCG-TTCATTTTAGTACTAGACATCTCTTGGGTATATGCAGTAAAACTTAAGCAGCCAAGCTCTTTCCTGTACAAATTGTCCTGAGTTTTGCATGCAAGTTCTAAAACCCTCTGCTCAACATTTCCTTTCAAGTCTAATTCACGGAACTGTCACTTATAAATTTAAAGATCATTTTGAAGTGTGTGCAGATAATTTTGAACTGTGTGCATGGGCTGTACTGTTATCTCATTCTAAA-------TAGACTGGGATGGAAAGT-TGCATCCTACAT----CAGCTTATACAAGATAAATGGTGGTTTTTATTTATGCATCACTCAGCTTAGTATAAAATGGGACTTTTAAAAAGGAGATTAAATTGGGAATGCAAACCAATTTTTAGTGAGTGTTTACAACT ..x...:..::.-...x....:....:xxx:..:..:..:-------.:xx..x..x.x:.....:x..:x.x.........x-...:.......x:x.:x:x.....x.:.x:..x.:...:x..:xx:.....x:..x:.:x.:.x..........x..x..x.....:...x:.:::.:.:.....:.--.....x.....:.:....:...:x.....:::.x...x..:............::....xx.---------.......x....x:.:..:x:..::.:.....x.:...x.x.....xx.:.:-------.:x....:...x.::...-.:..x::.x...----...xxx..:...-x....:-----------...x...--....::::.:.:..x:....:::.:-----:.x.x::.....:x...:::........::.-...:.....:.:..:.:x.:. 12M1D27M7D36M1D107M2I62M9I52M7D18M1D12M4D12M1I6M11I7M2I25M5I31M1I21M 278/428 65.0% 459/94230402 0.0% 52/428 12.1% 159041528 31173027 +11608 chr4 + 190214555 189099187 189099186 189099890 704 GAGCTAATGGGAAAGGTGCAGCCATTTGCTGTTTGAATTCAATTTTCATGCGCGAGGCTTTTTTCCCGAC-TCCGAGAGTGCTCTGCTTGTGTCAGCAGAGCAAGTAATTAAAAGGGTCAGTGGTTAAATATTGCTACAAGTAGTTCAAAA------CTAAATCGTCATTTTTAGAGACA--GAAAGACAAACACGGATGAACGATAAATGCATGATCCGTGGACTGATCTAGAACTACAAAAAAAAAAAAAAAAAGTGCTGACACCCTTCTTCACTCC----------------AGGAAGACAAGCGACTCCATTTAAGG--GTGGTGGA-----------AGCTCGTAAAAGAGT-AAGTGGTAATAGTGAGGTGCATTAGGGCATTCAAAGGCAGGTGCTCTATCGGAGAAAAATCAATGTGTGCATTGCATTTGCAAACCAAAGTCAG-GGTTATTGTTTCATTTGTCAAGGTTTTAGGCCACAGAGTAGAAACATTTAAATGAGTGATTTAAATCAAGCTAATCTTTTAAAGATTGTCCATTTATTCAAAACGTTAAGCTTA-ATTGATGCTTCAAGA-----CAGAGTACTCTTCCCTTTCCATCTTA------GCTGTCTTAGCTCTCACCGCTACCTTCCTGCTGATTTCTTTTATTAGACTCCTCAAG----TCCCATAATTGAATCTAATGTGTATTTCTACTATCACCACTAGGCTTATTAATTTGTGATAGCTCTAAACCACCACCAA chr4 - 94230402 29905254 29905253 29905975 64324428 64324427 64325149 722 GAGCAGAAAGAATAAGCTAGGTTATTTTCCCTTTTAATTCAGCTTGCGTCTACAGAATTATTATGTCAGCATCTGAGTGAGACCTGCTTGC--CAGTAGTG----TAGTTAATGGGTTCAGTGGTTAAATATTGCTACAAGTACTTCaaaatttttttttaattattatttttaaaGACACTGAAAGATAAACA--AATGAA-AATATGTG---GATACATGCATAGATTTGCATCT-------GGAAAAAAATAACTGCTGACAGCTCACTTCTTTCTATCACTTTTCTTCACAAAAAAAAAAAAAAAGGCCATTTGGGGAAGTTGTGGATAAGAGTGGGGATAATATAAAGGAATGAGGCATTAATGGTAGTTTCCATTTTGAGA-TCAGTAGTGGTCCCTAGAGCAAAGGAAATTCAATGCAAACACTGCACTTGCAGGCAGGAGCCAGTGGCAACTGTTTCATTTGTCAA-GCCTTACACCACAGAGCTGAAATATTTGAG----------GAGTCAAGCTAATCTCCCTGAAATTGTCCAT---TTCAAAATATGAAGCTTAGAATAATCTACCTAGAGCTATCAGTTGATTTTGTGCTTACTATCTTAACCTTTGCTGTCTAGCTTCTCCATG----TTTCTAGTTGTTGGGTTTTGGTTGTTTTTTCaaaatatttttataattaaatttattagttatatttgaaattaaCAGAAACCTTCCTGCTGTGGAATCAATTACAGCCATCTCTAA ....x:.x:.:.x.:.:xx:.::....x.:x...x......::..x.:.x::.:::::.x..x.x:.::.-..:...x.x.x:.......:--...:..x.----..:....x:..x..........................x.......------:.x...::.:.......:.....--......:.....--:.....-:...x:..---...x.:..x.:x...:.:x.x..-------::.......x..x........x.::x....x:..:----------------.::..:.x..:x:.xx......::..--..x.....-----------.xxx::....:..:.-.:.::x....:..::xx.x....xx.:x.-...:x:.::.x:x..xx.x.::..:...x......::x:..:....:.....::.x::..:...-..:x.:...............-.::...x:........:x....:....:.:----------:.:............:::x:.:.........---.......::.x.......-.x.:..x:x:.x...-----...xxx.:.:.x:x...x.:......------.......x:x:....xx:.----:...:x.:..x.xxx....:x.x.x:.::....:----.:::......:...:..x.:xx...x.:.:xx..:.x..xx.:x...x:.:x.x..x:..x:x.:xx.:...:.x.:.. 70M1I20M2D8M4D46M6I23M2I12M2D6M1D8M3D23M7D35M16I26M2I8M11I15M1I29M1D64M1I21M1D30M10D31M3D18M1I15M5I26M6I19M4D34M4I79M 427/666 64.1% 722/94230402 0.0% 94/666 14.1% 159193933 31020622 +3053 chr4 + 190214555 189119789 189119788 189119837 49 AACAAAGATCAGAGCAGAACTAAAGAAAATTAAAACAAACAAACAAAAA chr4 - 94230402 64563912 64563911 64563960 29666443 29666442 29666491 49 AGCAGAGAGTAAATTAGAATGAAGGAAAATTAAAACAAACAAACAAAAA .:..:...x:.:.x:....:x..:......................... 49M 39/49 79.6% 49/94230402 0.0% 0/49 0.0% 124555877 65658678 +3140 chr4 + 190214555 189123051 189123050 189123106 56 AATAATATAATAATAATAATAATAAACAAAAGCAAACAAACAAATAGTACCTCAGT chr4 - 94230402 71370664 71370663 71370719 22859684 22859683 22859739 56 AATCATTAAACAACAATAACAATAACCAAAAACAAACAAACAAACAACCCTTCAGT ...x..xx..:..:.....:.....x.....:............:.::x.:..... 56M 43/56 76.8% 56/94230402 0.0% 0/56 0.0% 117752387 72462168 +3417 chr4 + 190214555 189169791 189169790 189169904 114 TTTTTTTTTTCTGTTTCTTCCAAACTACCATTTCTCTTCATTAATTATCTCTCTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTGAGATGGA chr4 - 94230402 42757824 42757823 42757924 51472479 51472478 51472579 101 TTTTGTTTTTGAACTTCTTTCA--------CTTTTCCTCAT-----ATGTGTAGGTATATATGTGTTTATATATGTATATTTACTTTTTTCCTTTGTGTATTTGCAAAGATGGA ....x.....xx::.....:..--------:..:..:....-----..x.x.xx........:.:.x.......:.....x..:......::...x.x.x...x:x:....... 22M8D11M5D68M 73/101 72.3% 101/94230402 0.0% 13/101 12.9% 146411967 43802588 +3582 chr4 + 190214555 189169814 189169813 189169895 82 ACTACCATTTCTCTTCATTAATTATCTCTCTGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735320 92735319 92735399 1495004 1495003 1495083 80 ACAACCACCCCACTCCA--AAGTAACCTCTTGCATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCT ..x....:::.x..:..--..x..x.::::..:....x.....:...:..:.:........x......:.x.........:. 17M2D63M 58/80 72.5% 80/94230402 0.0% 2/80 2.5% 96434494 93780061 +3040 chr4 + 190214555 189169844 189169843 189169895 52 TGTATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735403 1495000 1494999 1495051 52 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT .:.x.....:...:..:.:..........x....:.x.........:.x... 52M 41/52 78.8% 52/94230402 0.0% 0/52 0.0% 96434492 93780063 +3285 chr4 + 190214555 189169846 189169845 189169896 51 TATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735352 92735351 92735402 1495001 1495000 1495051 51 TATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTT ...x.....:...:..:.:...............:.x.........:.x.. 51M 42/51 82.4% 51/94230402 0.0% 0/51 0.0% 96434494 93780061 +3494 chr4 + 190214555 189257682 189257681 189257735 54 CTCCTGGGTTCAAGGGATTCTCATGCCTCAGGCTTCCAAGTAGCTGGGACTACA chr4 - 94230402 18197139 18197138 18197192 76033211 76033210 76033264 54 CTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACA ..:...........x.x...x..x.x.....x...:...........:...... 54M 45/54 83.3% 54/94230402 0.0% 0/54 0.0% 171060543 19154012 +3575 chr4 + 190214555 189268658 189268657 189268761 104 TTTTAAGGACAGGCACACCTCATTTT------ATGGTTTCACTTTCTCGTGCTTCACAGATAATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCAATTGAAG chr4 - 94230402 9170261 9170260 9170369 85060034 85060033 85060142 109 TTTAAAGGAAAAGAATGCCCCCCTTTTCCATTGTGGTCTATTTCTATCTTG-TCCAAAGCTTGTGTCTACCTTTTTTTTTTGTTTTTTGTTTTTTTTTAACCAATTACAG ...x.....x.:.x.::..:.x:...------:....:.xx:.:.x..x..-.:..x..x.x:...:.x::..........x......x.................:x.. 26M6I19M1D58M 73/103 70.9% 109/94230402 0.0% 7/103 6.8% 180098397 10116158 +3029 chr4 + 190214555 189290924 189290923 189291007 84 ACAAATGTATTTGGAGCATCA-------AAACAAAAGCAAAACACACACACACACACACACACACACACACAGACACACAGAAAAAGTAGA chr4 - 94230402 56248408 56248407 56248498 37981905 37981904 37981995 91 ATAAACACTTTTAGATTGTCACTGTTTGAAAGCAAAGACAAACACACACACACACATACACAAACAACAACAAAAACTCAACAAAGATAGA .:...:::x...:..x::...-------...xx....xx.................:.....x...xxx...:.x..x..:x...::.... 21M7I63M 59/84 70.2% 91/94230402 0.0% 7/84 8.3% 133042516 57172039 +3476 chr4 + 190214555 189292984 189292983 189293050 67 AATGCTACATATATATATACACACATATATGTGTATATATGTACATATATATGTATGTGTGTATATA chr4 - 94230402 19793087 19793086 19793153 74437250 74437249 74437316 67 AGTACAACATGCACATATACACAGATGAACGTGCATATATGTACATATATAAATAAGTTTGCATTTA .:.:.x....::.:.........x..:x.:...:.................x:..x..x..:..x.. 67M 50/67 74.6% 67/94230402 0.0% 0/67 0.0% 169499897 20714658 +3448 chr4 + 190214555 189379890 189379889 189380008 119 CAGCAAACACACACACCTGCAAGCACACACACACCTGCAAGCACACACACCCGTAAGCACACGCACCAGCAAGCACACACACCTGCAAGCACACGCACCTGCAAGCACA----CGCACCAGCA chr4 - 94230402 89016078 89016077 89016198 5214205 5214204 5214325 121 CAGGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGC--GCACACACGGATGCGTGCCCATGGGCACACCTGCA ...x.x:::......:.....x..........:::...:x:......::.xx:.:x::.....:.xxx.::x.::..x....:...--......:.:xx...:x..x..----.:....x... 86M2D21M4I10M 75/117 64.1% 121/94230402 0.0% 6/117 5.1% 100363812 89850743 +3417 chr4 + 190214555 189380419 189380418 189380532 114 GCTGCAAGCACGCACACCTGCAAGCACACACAGCTGCAAGCACACACCAGCAAGCACACACAC----CTGCAAGCACACACAGCTGCAAGCACACAGCAGCAAGCACA----CACACCTGCA chr4 - 94230402 89016077 89016076 89016198 5214205 5214204 5214326 122 GCAGGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA ..x.x.x.::.:....:.....x.........xx.x::x........xx....:::..:....----x..::x.::..x...x:...:x:.....:.xx..:x..x..----.......... 63M4I41M4I10M 76/114 66.7% 122/94230402 0.0% 8/114 7.0% 100364342 89850213 +3688 chr4 + 190214555 189380660 189380659 189380782 123 GCACACGCACCTGCAAGCACACACCTGCAAGCACACACACCTGCAAGCACACACAGCTGCAAGCACACACAGCTGCAAGCACACACACCTGCAAGCACACACCTGCAAGCACA----CATACCTGCA chr4 - 94230402 89016084 89016083 89016198 5214205 5214204 5214319 115 GTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCA------------TACACGTAGATGTGTGTGCAGACACTTGCGCACACACGGATGCGTGCCCATGGGCACACCTGCA .::...:..:.....x........x:.:xx..:.......x.....:::..------------:....::..x..::x.::..x....:...:x:.....:xx...:x..x..----..:....... 51M12D50M4I10M 75/111 67.6% 115/94230402 0.0% 16/111 14.4% 100364576 89849979 +3492 chr4 + 190214555 189380715 189380714 189380818 104 GCTGCAAGCACACACAGCTGCAAGCACACACACCTGCAAGCACACACCTGCAA----GCACACATACCTGCAAGCACACACACCTGCAAGCACACACAAAATGAGTGC chr4 - 94230402 89016077 89016076 89016181 5214222 5214221 5214326 105 GCAGGATGTGCACACATCTGCATGCACACACACGTTTGCGCACACACATGCAAATGCATACACGTAGATGTGTGTGCAGACACTTGC--GCACACAC-GGATGCGTGC ..x.x.x.::......x.....x..........x.x::x........x.....----::....:..xx..::x.::..x....:...--........-::...x.... 53M4I30M2D8M1D10M 73/101 72.3% 105/94230402 0.0% 7/101 6.9% 100364638 89849917 +3162 chr4 + 190214555 189442457 189442456 189442506 50 ATGTATGTGTATGTATATGTATGTTTATGTTTATGTGTGTGTGTGTGTAT chr4 - 94230402 19704280 19704279 19704329 74526074 74526073 74526123 50 ATACATATATACGTATATATTTGTGTATGTTCATGTGTGTGTGTGTGGAT ..::..:.:..:......:.x...x......:...............x.. 50M 40/50 80.0% 50/94230402 0.0% 0/50 0.0% 169738177 20476378 +3008 chr4 + 190214555 189442482 189442481 189442523 42 TATGTTTATGTGTGTGTGTGTGTATATATATATATATATATA chr4 - 94230402 19559286 19559285 19559327 74671076 74671075 74671117 42 TATTTTTTTTTGTGTGTGTGTGTGTATATATATATATATACA ...x...x.x.............:................:. 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 169883196 20331359 +17650 chr4 + 190214555 189445577 189445576 189446300 724 AAATGTTAGCACAAGGAAAGTTAATACCGATTTTCTCACCTTAGACTAACAAGGTTTCTGGATTGCATTGGCAAACTATTCAATAGAAATTTATAAAGGATACTTTAAGAGCAGGAAATCCCTTGTCAGGCAGAAAGCACTATAGGCAGACAATTCTCATGTCCAATGACTCCTACATTAAAAACAAATGTTTCATATGATTGAAATCATTTCATTACCCAGCTCATTCCTCTTATCTGGAGGTAATTTTTAACAGACTCCAGCCTCTTTTCCAGACACAAATTTCCAGCCACTCTCCTTCATGCCCCAAGAGGCCATTTCATAAGCAAGCTAACATCAATTCAAACAAGATTCATTTTTTCCATCACTTTAC-ACCCTAGAAAACTGATACAGACTTCCCCAGTTGAAGTTTAATACAGAACATAGGTTTATGAAGTGTGGAACCTCATTTCAAATGTACACATAATATATCGATATAGACTTTGGGAACATTTTCAAAGAATACAAAT-GTGCTAGGCCCAAGGCTTAAATGGTCCTTTTCACCGAAATACAGCTCATAAAAG-----ATTTCAGAAG-GTCAGAAAACTTTAAAATTTAGTGCCCTTGTTTGAGCTTTCCCAGAATGTTTTAATTTAGAAACTAAATTGTATATCCAGCATGCAAATGTGTAGTGTAAGCAATTCATTAGATTAAACATATTTGACCACTGAGGACCTGATTATGAATT chr4 - 94230402 29790037 29790036 29790725 64439678 64439677 64440366 689 AAATGTTAAAAATGGGAATGTCAAAATTGATTTTTGTACCTCAGAATGACTAGTTTGCAGGA----ATTGGAGAGCAATTCAACAAAAATTTAGAAAACAT-TTTTACTGGCAGGAAATCACCTGTC---CAAGAGCTATTTTAGGGGGACAGT-CTCATGTCCAACTCCTTCTCTATTAAAAACGAATGTTTAGTGGCATTGAAAGCATTTCATTACACAGCTCATATGCCTTATGCAGAGGTAATTTCTAGCGTATTCCCACTTGCTCAGTAAACACAATTTTGTAGGCACTTATTTGCCTACTCCAAGATGGAATTTCAAAAGTGAACTAAAATCACTTCAAACCAAATTCA-TTTTTCTGTCACTTTACAAACATAGCAAACTGATACCAACTAACTGTGATAAAGTTTAATGCAGACT----GCTTAT---GTGTGGCACCTCTTTTCACATTTATGTACAATGTATCAATATTTGTT---------TATTAAAGGAAAATTTATAGTTTGATATACAAAATTTAAAAAGTATTTCCCTCCTCAATAAGGTATACACAGGAATAAATCCAAGAAGTGTCAAAA---TATGACATTTAATATCTACCTTCAGTATTTCTAAAAACAAGTTACTTCAGCAGCCAAG-TGCATATT--ACTTACAAAAAT---TTGTGTGCATATTAATAACTGTAAAATAT--------TGAAGATCAAATTATGGCTT ........:x.xx:....x..:..x.::......:x:....:...x.:..x..x..x.x...----.....x:.:.x......:.:.......x...:x..-:....xx:..........x.:....---..::.:x:.:.x....x:....:.-...........:xx..:..x:.........:.......x:.:xx.......x...........x........x:x:.....x::..........:..:.:x.:...x:.:.x:.:xx:.:......x...x:..x....:x::.x.x.:.:......x.xx......x...::.:....x....x.......x.:.....-......::.........-.x.x...x..........x:...xx.:xx.x.:.........:....x:----.:....---......x.....x.....x..x..:::.:...:....:....xx::.---------.x..x..:...x.:xx..-..x:x.x::x...:::.....x:..x:..::.x..xx....x:.:x:.:.x.:.-----..::x.....-....:..---.x.:.x.....:.::.:x:x..:::xx....:x.:..::xx...x..:..x.:.:..:-..:....:--:.x.:....x:.---x...:x...xx.:.x..:x.xx..x....--------...:..:.x:......:x.. 62M4D35M1D25M3D24M1D200M1D17M1I49M4D6M3D47M9D18M1I54M5I10M1I7M3D58M1D8M2D12M3D29M8D20M 454/681 66.7% 689/94230402 0.0% 51/681 7.5% 159655540 30559015 +3056 chr4 + 190214555 189460642 189460641 189460714 73 AGAAAAAAGGAAGGAAGGAAGGAAAGAAGAAAAAAAGGAAGGAAGGAATGGGAAGAAGGGAAGGAAGACAGGA chr4 - 94230402 44400496 44400495 44400568 49829835 49829834 49829907 73 AGGGAGGGGGGGGGAGAGAAGGAAAGAAGAAAAAAAGAAAGAAATGGGCAAAAATAAGCCACAGAAAATGGAA ..::.:::..::...::....................:...:..x.::::::..x...xx.x:...:.::.:. 73M 46/73 63.0% 73/94230402 0.0% 0/73 0.0% 145060146 45154409 +3129 chr4 + 190214555 189470488 189470487 189470529 42 TTTTTATTTATTAATTTATTTATTTTTAATTTTCTTTTTTTT chr4 - 94230402 93608709 93608708 93608750 621653 621652 621694 42 TTTTTATTTATTAGTTTATTTATTTTTGATTGTTTTTCTTTT .............:.............:...x.:...:.... 42M 37/42 88.1% 42/94230402 0.0% 0/42 0.0% 95861779 NA +3140 chr4 + 190214555 189519773 189519772 189519869 97 CTGTTCTGTCTCTATCTTTATGTCTCTGTCTCTGTCACATATGTGTGTGTGTGTGTATATGTATATATGTGTATATACGTATGTGTATATATGTGTG chr4 - 94230402 70982590 70982589 70982682 23247721 23247720 23247813 93 CTATTTCATATATATATTTATTCATGTAACTTTTTTCCTTGTGTGTGTGTATGTG----TGTACATATGTTCATAAATGTGTGTGCATACACACATG ..:..:::.x.x...x.....x:x.x.:x..:.x.:x.x.:.........:....----....:......x:...x.:..:....:...:.::::.. 55M4D38M 61/93 65.6% 93/94230402 0.0% 4/93 4.3% 118537183 71677372 +3262 chr4 + 190214555 189534018 189534017 189534114 97 AGGTCATAGAATTTTTC---CCTGGTTCATACTGTTTTCTTGTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTATTGTT chr4 - 94230402 48989482 48989481 48989579 45240824 45240823 45240921 98 AGGTGACAGAAATTTGCAGTTCTGA--CATAAAATCTTTTAGGGTTTCTGGTTGTTGTTGTTGTTTGTTTGTTTGTTTTTCCTGGTCTTTTGTTACTGCT ....x.:....x...x.---:...:--....xx:.:..:.x.xx...:.x............x.......x........x::.x..:..x.x...:..:. 17M3I5M2D73M 68/95 71.6% 98/94230402 0.0% 5/95 5.3% 140544536 49670019 +3036 chr4 + 190214555 189534028 189534027 189534103 76 ATTTTTCCCTGGTTCATACTGTTTTCTTGTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGTTTTGTTTT chr4 - 94230402 81709499 81709498 81709574 12520829 12520828 12520904 76 ATTTTATCTCATTTTGTCCAGTTTTACCCATTTGTTTGTTGTTATTGTTCTTTCATTTTTTGGTTTTTTTTTTTTT .....x:.:::x..::.x.x.....x::xx...x.........:.....:...xx.......x...x....x.... 76M 53/76 69.7% 76/94230402 0.0% 0/76 0.0% 107824529 82390026 +3047 chr4 + 190214555 189534046 189534045 189534095 50 CTGTTTTCTTG----TTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGT chr4 - 94230402 17488387 17488386 17488440 76741963 76741962 76742016 54 CTGTTTGTTTGGCTTTTTTTGTTGTTGTTGTTATTTTTTGTTTGTTTGTTTGGT ......x:...----.....x...........:..........x.......x.. 11M4I39M 44/50 88.0% 54/94230402 0.0% 4/50 8.0% 172045659 18168896 +3261 chr4 + 190214555 189534056 189534055 189534216 161 GTTTTTTTTGTTGTTGTTGTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTATTGTTATTGTTGTTCATATTCCCCAGTACTTGTTTAAAAATATGTAATTCATCTTGAAGCACTGTGTTACAGTTTTTGGGGTGATATTTAACCAACACAAAAGCTTT chr4 - 94230402 14581398 14581397 14581526 79648877 79648876 79649005 129 GTTTTTTTTGTTGTTGTTGTTTGTTTGTTTTTTGTTTTGGATTATCATATACC----TTATTTTTGAGC-----------TGCTTCTTTATGAATAGTT---------------ACTCTTTTACAGTCTCTGTTGTGGTGTT--ATTACCAAAAAAACGTT ......................x..xx............xx..:.:x.:.x::----.....x...xx.-----------.:...x....x:....xx.---------------...x.x.......:.:..xx...:.:..--.::.x..x....:.x.. 53M4D12M11D19M15D28M2D17M 94/129 72.9% 129/94230402 0.0% 32/129 24.8% 174952658 15261897 +3098 chr4 + 190214555 189563975 189563974 189564028 54 CATGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735350 92735349 92735403 1495000 1494999 1495053 54 CATATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ...:.x.:...:...:..:.:........x......:.x.........:.x... 54M 42/54 77.8% 54/94230402 0.0% 0/54 0.0% 96828625 93385930 +3030 chr4 + 190214555 189563976 189563975 189564026 51 ATGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT chr4 - 94230402 92735353 92735352 92735403 1495000 1494999 1495050 51 ATCTATATGTATGTACACATATATATATTTTTTCTATTTTTTTTTCTGTTT ..x.:.:.:...:..:.:...............:.x.........:.x... 51M 40/51 78.4% 51/94230402 0.0% 0/51 0.0% 96828623 93385932 +7739 chr4 + 190214555 189575740 189575739 189575946 207 AAGCAAAGTTTACTTCTTCTGACTATTCGTTTTTTATTTATT------ACAGCAGATTTATCATGTGCTAGATAATTTCACATTCATGGCTTTTCTAGTGCTCAATTTATCAAGGACAGTGGTGCCACATACTCTTGTATTTTATCACAAGT--ACCATCAGGATAAGAGAGACAGGTTCTCTG-----------CTGCAGT-GACTGCCACGAAATCATAATTCAT chr4 - 94230402 29744749 29744748 29744974 64485429 64485428 64485654 226 AAACAAAAGTTGATCTTTTTGCTCattt-ttatttatttatttttcttatataaaatttGTCATCTGCTAGATAATTTCACATTCACGGCTTTTCTAGTGCTCAATTTATCAATGAGATTGGAACTGATTTTTTTTCTATTTTATCTCCAGGGAACCATTAGTGTGGAAGTGACAAGTTTTCTGTCATGGACTGACTACTGTCAACTACTGTCAAATGACAATTCAT ..:....:x..:x.::..:..x::...:-..x..........------.:.xx.:....:....x.....................:..........................x..x.x...x:.::xx.x:.:..x.........x.x..x--.....:..x:.:::..x....:...:....-----------..:.x..-:...:.:::x....x.:....... 28M1D13M6I104M2I30M11I7M1I24M 151/206 73.3% 226/94230402 0.0% 21/206 10.2% 159830991 30383564 +17023 chr4 + 190214555 189584595 189584594 189585052 458 AGGGAAAATGAGTAAATTTGCCACTAATGTAAATGTAACATAAGTAGTAA--TTAA----TTTTCTTTATAAAAAGCTGAG-----CTCATTGACTATATTGAAAGTATAAGCAGGAAAGTAAAA--CATGACCCTAACAACAAACAGATGGCATTCCCCTTCATGTGCCTGCGCACACTTTTGAAGTTTGAGAGAAACCACACAA-CACTCATGCTTTCAATTATGTTTCC----AACAGAGACAGACCCCAAATGTATTTTTTCTTTATAACTGATTGCTCTTCCACGTCAGTCCATATGCCTGAGCTGGAAATTTACCTCAGCAAAGGAAAGAGAAAGAAAC-CTCAGCAACCTCCTGACTTGGCACCCTCA-GAAATACTAGAATAAATTTAAATCATTATTTGGCTAAGTCCCTTCTCCTCCTTTATTTTCTTCAAGGGAAAATAAAGGTA----CTTAAAGAAACTGGATCCAATT chr4 - 94230402 29748812 29748811 29749287 64481116 64481115 64481591 476 AAGGAAGATGCATAATAAAGCCTGTAACCTGAATATAGGAGAGAAAATAAAGTTATGTCTTTTTCATTACAAAGGACTGAAAATTTCTCATTGCTTTCAGTGGGAGTATAAGTAGGAAAATAAAATACATGACCCTAACAACAAACAGATGGCATTCCCCTTTCTGTGATTTTGTACACTTTTGAAGTTGTAGAGGAACCACATAAGCAGTCATGCTTTCAATTATTTTCCCCACTAACAGAGGCAGACGCAAAATTTATTTGTTCTTTCTGACTGATTACTCTTCCATTCCAGTCAGTGTGTCTAAGTGCTAAATGCCCTTCAGTGAAAGAAAGAGAAATAAACTTTCAGAAAATTCTTGGCTTAAAAACCAAAGGAAATATTTGACTAAGTTTAAATTCTCATTTTATTAACTTCTTTCT--TATTTTGTCCTTCTTAGG----AATTAAAGTGATGTCTGCAATGACATGGATTCAATT .:....:...x:...xxxx...xx...:x.:...:..:x.x.::x.:...--...x----.....x...:...:::....:-----.......x:.x:.x..::........:......:.....--...................................:x....x:.x:.:..............xx....:.......:..-..x................x..:..----.......:.....x.x....x.....x......x.:.......:........:x:.....x:.:..:..:..:xxx....x:x.:....::..:..........x....-:....x..x:..:..:...::x.x..xx.-......:.x..x...:.......:x.:....x::...x.:.:....--.x:...:.::.::.:.:.----...x..:..:----..xx..x:.xx.....:..... 50M2I4M4I21M5I39M2I79M1I25M4I109M1I29M1I46M2D18M4D10M4I22M 329/452 72.8% 476/94230402 0.0% 30/452 6.6% 159835783 30378772 +3769 chr4 + 190214555 189612244 189612243 189612368 125 AACAGGGCA----GCCCTCCACTCCACAATTTCTTCCTCTCTGCTCTCTTTCCTGTTTCTCTATCTCCTCCTTTCTTCTTCTTTTTCTCCCATGTCATTTTTTTCTTCTCTGTCTT----ACCTTACTTGAGC chr4 - 94230402 32223605 32223604 32223733 62006670 62006669 62006798 129 AACAAGGCCTTATGCTTTTTCCTTAATAGTTTCTTTTTTT----TCTCTCCCATATTTTTCAATCTCCTTCTTTCCTCTTGGATGTTCCCTGCCTAATCTGTTTCTTTTCTGTTTTTCAGACTTTACTTAAAC ....:...x----..::.::x..:x.:.:......::.:.----.....::.x.:...:..x.......:.....:....xxx.x.::..:::x.x..:.x......:.....:..----..:......:.:. 9M4I27M4D72M4I13M 81/121 66.9% 129/94230402 0.0% 12/121 9.9% 157388639 32825916 +3460 chr4 + 190214555 189627318 189627317 189627404 87 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTCTTTCTTTTGC--CCACATAAAGATAACAGGAAACCTGTACCAGAGAAGCACTTAC chr4 - 94230402 27034826 27034825 27034909 67195494 67195493 67195577 84 TATATATATATGTGTGTGTGTGTGTGTATATACCTTTCTTTTCCTTCTACAAAAAGAAACCTGGGAA-----ATCTGGAGAGCACTAAC .:.:.:.:.:.................:...::.........x.--.:...x.....x.x.x..:..-----.:.x.:::......x.. 44M2I21M5D17M 61/82 74.4% 84/94230402 0.0% 7/82 8.5% 162592492 27622063 +3550 chr4 + 190214555 189629768 189629767 189629861 94 GAAAAAAAAAG------AAAAGAGAAAGAAAGAAAGAAAAAAAG----------------AAAGAAAGAGAAAGAAAAAGAGAGAGAGAAAGAAAGACAAAGAAAGAAAGAGAGAG chr4 - 94230402 22228860 22228859 22228975 72001428 72001427 72001543 116 GAAAAAAAAAATCTCACAAAAGCAAATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGG ..........:------.....x:..x.....:x...x::::..----------------.x....:......:.....:...........:...:...::..:x::...:..::. 11M6I27M16I56M 68/94 72.3% 116/94230402 0.0% 22/94 23.4% 167400908 22813647 +3126 chr4 + 190214555 189629775 189629774 189629843 69 AAAGAAAAGAGAAAGAAAGAA-------AGAAAAAAAGAAAGAAAGAGAAAGAAAAAGAGAGAGAGAAAGAAAGAC chr4 - 94230402 3442080 3442079 3442155 90788248 90788247 90788323 76 AAAACAAAGGGGAACAAACAAGCCTTATAGGAAAAAAGGAAGAAGGAAAAAGAAAAAAAAAAAGAGGTCAAAAGGC ...:x....:.:..x...x..-------..:.......:.....:..:.........:.:.:....:xx:....:. 21M7I48M 51/69 73.9% 76/94230402 0.0% 7/69 10.1% 186187695 4026860 +4036 chr4 + 190214555 189629780 189629779 189629897 118 AAAGAGAAAGAAAGAAAGAAAAAAAGAAAGAAAGAGAAAGAAAAAGAGAGAGAG----AAAGAAAGACAAAGAAAGAAAGAGAGAGAAAGAAAGA-AAGACGAAAGAAAGAAAAGAAAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x.:....:...........:.:.::...:.:...xx.x:...:..x:.::.----.:.x......x:.:.x....::.x:::....:.....-..:..:xx:.....:.:..:..x.... 54M4I37M1I27M 78/118 66.1% 123/94230402 0.0% 5/118 4.2% 159096616 31117939 +3528 chr4 + 190214555 189629790 189629789 189629889 100 AAAGAAAGAAAAAAA------GAAAGAAAGAGAAAGAAAAAGAGAGAGAGAA--------------AGAAAGACAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGACGAAAGAAAGAAAAG chr4 - 94230402 22228856 22228855 22228975 72001428 72001427 72001547 120 AAAGGAAAAAAAAAATCTCACAAAAGCAAATGAAAGGCAGATGGGGAGGGTATTTCAGTGCTCTATAGAAGGAGAAAAAAAAAAAGAGAGAGAAAAAAAAACAGGGAGTAGAAGGGAAGG ....:..:.......------:....x..:x.....:x.:.x:.:...:.x.--------------....:..x...:...:.............:...:.x..:x::x....:.:..:. 15M6I31M14I54M 71/100 71.0% 120/94230402 0.0% 20/100 20.0% 167400934 22813621 +3070 chr4 + 190214555 189629834 189629833 189629915 82 AAAGAAAGACAAAGAAAGAAAGAGAGAGAAAGAAAGAAAGACGAAAGAAAGAAAAGAAAGAAAGAAAAAGAAAAAAAAGAGA chr4 - 94230402 25066975 25066974 25067056 69163347 69163346 69163428 82 AAAGGCTGCCAAAGACAGACAGAAGAAATAACAGAGAGTGGGAGCAGAAGGGGAAAAAAGAAAGAAAAGATAAGAAAAGAAA ....:xx.x......x...x...:::.:x..x.:...:x.:x::x....:.::..:............::x..:......:. 82M 53/82 64.6% 82/94230402 0.0% 0/82 0.0% 164562859 25651696 +3146 chr4 + 190214555 189649643 189649642 189649727 85 CCCTCAAAGATGCTGGGGAGAAAAAACGAGAAAACAAAAAAATTAAATGGGGAATGAAGAAAAGAAAGGAGAAAATGAGAAAAGA chr4 - 94230402 36691889 36691888 36691973 57538430 57538429 57538514 85 CCCAGGAGGAGGGAGGGAATAAAGGAAGAGAAAATAACAGGAGGAAGGAGGGAGTGAAGAAGAAAAAGTAACAAATCAGAAGAGA ...xx:.:..x.xx...:.x...::.x.......:..x.::.xx..:x:....:.......:.:....x.:x....x....:... 85M 56/85 65.9% 85/94230402 0.0% 0/85 0.0% 152957754 37256801 +3059 chr4 + 190214555 189663380 189663379 189663438 59 AAAAATAATATTATGAACAATATTATTTTATATATATACACACCTATCCTATTGTTTCT chr4 - 94230402 87883504 87883503 87883562 6346841 6346840 6346899 59 AACAACAATGTCATAAATAATATTTTTGTATATGTACATACATCTTTCATATTTTTTCT ..x..:...:.:..:..:......x..x.....:..:.:...:..x..x....x..... 59M 44/59 74.6% 59/94230402 0.0% 0/59 0.0% 101779876 88434679 +5802 chr4 + 190214555 189691012 189691011 189691149 138 TGTATCAACTGAAGTCAGATGAAGAGCTCCACATTCATCCAAAGTTCTTTT-CATACTAATTAGATGCTCTTCAAAGGTGTAATTACCATTTAAAAATGACTTTGGAGTGCAGGATACACAATAGATTTTTAATGTCTT chr4 - 94230402 29708818 29708817 29708954 64521449 64521448 64521585 137 TACATCAATTGAATTTAG--GCAGAGTTCCACGTCTGTTCAAAGTACTTTTTCATGCTAATTGTATACTCTTCAAAGACTTAATTACCATTTTGAAATTACTTCTGTATCCTGGATAGCTACTAAAATATTAATATCTT .::.....:....x.:..--.x....:.....:.:::.:......x.....-...:......:x..:..........::x............x:....x....:x.x:.x.x.....xx:.x..:.x.x.....:.... 18M2D31M1I87M 99/136 72.8% 137/94230402 0.0% 3/136 2.2% 159982194 30232361 +3040 chr4 + 190214555 189741132 189741131 189741215 84 CCCCACGCTGCACTCCACACCCCGGCACTCCCACGCTGCATCCCACCCTAGGAAAGCACAAGGAAATCATGTGAGCACCACAGG chr4 - 94230402 2199955 2199954 2200038 92030365 92030364 92030448 84 CCCCCTGACCCACTTCCCTCCCCATCACTCCTGTGCTGCTCCGCGCCCCAACCCAGCTCAAGGTGATCATTTGAACAGCCCAGG ....x:.x:x....:.x.x....:x......:::.....x:.x.:...:.:xxx...x.....x:.....x...:..x.x.... 84M 55/84 65.5% 84/94230402 0.0% 0/84 0.0% 187541177 2673378 +3121 chr4 + 190214555 189861301 189861300 189861358 58 GGGAAGGAGGGAGAGAGGGAGGAGAGAAAGAAAGAAAGGGAAAAAGAAAGAAAAAAGG chr4 - 94230402 53268253 53268252 53268310 40962093 40962092 40962150 58 GGAAAGGAGGGAAAGGGGAAGGAGAGGCAGAAAGTAATGTGGACAGAAGGAGAAATGG ..:.........:..:..:.......:x......x..x.x::.x....:..:...x.. 58M 43/58 74.1% 58/94230402 0.0% 0/58 0.0% 136593048 53621507 +3013 chr4 + 190214555 189883512 189883511 189883549 38 CACACACACACACACAGAGAGAGAGAGAGAGAATTGAG chr4 - 94230402 12884346 12884345 12884383 81346020 81346019 81346057 38 CACACACACACACACAGAGAGAGAAAAAAAGATTTGAG ........................:.:.:...x..... 38M 34/38 89.5% 38/94230402 0.0% 0/38 0.0% 176999166 13215389 +4080 chr4 + 190214555 189897922 189897921 189898163 242 AAGGAAAATAAATGAAAGGGAGGGAAGGAAGGA------------------AGGAAGAAAGGAAGGAAGGAAGGGGGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGA---AAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGA-AAGAGAAAGAAA-------------AAGAAAGAAAGAAAGAAAGAAA-------GAGAAAGAAAGG chr4 - 94230402 32944036 32944035 32944316 61286087 61286086 61286367 281 AACAAAGATAGTGGAACGGGTATGAAGGAAGAAGCTGTCAGATAATTAATAAGGACAGAACCAGAAGAGGAGAGAGTGGGAGATGGGAGGAAAGACAGAAAAGAACAGACAACTGGAGGAGGCAGAGA--GGAGGAAGATGTTACAGAGAACT-GGGCAATGAAATAAGGGGTTTAGCAAAGGACTAAAGGAATAGAATGGCTGTGGAAGAGAGTGAGAAGAGTAAGAAATGATTCTTAGGTTTAAAAAAAAAAAAAAAAAGAAATGACTTGAAGAAAATAAGG ..x:..:...:xx...x...x:x........:.------------------....x::..xx.::::....::.:.x::....x:.:.:......x...:..::.x...x.:xx:...:.:.x.:...--.:......:x:xx.x......xx-::.x..x....x..:..:---.:x....:.xx...:...x....x.:xx.x:::.:...:x..-.....x......-------------x.:...:...:...:.......-------:.....:x.... 33M18I77M2D23M1D18M3I42M1I12M13I22M7I12M 152/239 63.6% 281/94230402 0.0% 45/239 18.8% 156953886 33260669 +3303 chr4 + 190214555 189897979 189897978 189898071 93 GGAAGAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAA chr4 - 94230402 48787367 48787366 48787459 45442944 45442943 45443036 93 GGAAGATAGGAAAAAGAAGAGAAAGGAATACAGAACTTTTTAAAAAGGAATTCAAAGATGTAAAAAAAAAAAAAAAAGTAATGAAAGAAAGAA ......x..::...::......:..:..x.x....xxxxxx.:.......xxx.:::.x.x.::...:...:.:....x..x:.......... 93M 61/93 65.6% 93/94230402 0.0% 0/93 0.0% 141110612 49103943 +3092 chr4 + 190214555 189897983 189897982 189898059 77 GAGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAA chr4 - 94230402 9237707 9237706 9237783 84992620 84992619 84992696 77 GGGAGAGAAAGGCAGTGGGAGGAAGAAGGAAAAAAAGGAAAAAAAAAAGGGAGATTTGTGTCAGATGGGGAAAGAAA .:.........:x..x.:...:.....:....:....::...::...:::.::.xxx:x.xx...x:.:........ 77M 50/77 64.9% 77/94230402 0.0% 0/77 0.0% 180660276 9554279 +3377 chr4 + 190214555 189897984 189897983 189898086 103 AGAGAGAAAGAAAGAGAGAGAAAGAAAGAAAGAAAGAGAAAG----GAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAA----AGAAAGGAAAGAAAGAAAG chr4 - 94230402 30533176 30533175 30533286 63697117 63697116 63697227 111 AGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATAGAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...:.....::.:.:..........xx.x:.:....x:..:.----::.x:...:xx.:..x::.....x...:..:...::.:.:..----:.......:..:..x.... 42M4I42M4I19M 68/103 66.0% 111/94230402 0.0% 8/103 7.8% 159364808 30849747 +4024 chr4 + 190214555 189898006 189898005 189898176 171 AGAAAGAAAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGGGAGAAAGAGGAAT chr4 - 94230402 29503818 29503817 29503976 64726427 64726426 64726585 159 AAAAAGAGGGAAGGAAAAGAGAAAGAAGTGAGAAAGGAA------------AAAAAAACCTTACAAAAGGAAGAGAAATGGAATACAAATGATAACAAGCAGAAAGGCATCTAAAACTACGAGGAATAGAGTAAAGAATCAGAAAATCCAGAGCAAAGGATGAAGAAGAAT .:.....::...:..:..::........x:..:......------------...:...xxxx.x...:.:....:.:.x:...x.x...x..x.:x...x.::..:.x.xxx..:.xx.x..::..x.:..x..::..xx.::...xxx.:..x..:...x:....:.... 39M12D120M 99/159 62.3% 159/94230402 0.0% 12/159 7.5% 160394188 29820367 +3366 chr4 + 190214555 189898013 189898012 189898140 128 AAGAAAGAGAAAGGAAAGAAGGAAGGAAGGAAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAAAG chr4 - 94230402 58035027 58035026 58035145 36195258 36195257 36195376 119 AAAAACGCTAAACAAAAGAGGGGGCAAGGGAAGCAAATGAGTAAATTTAAAACAAACAAAGGAAA---------AAAAGAAAAACAAGAAAGAAAATGCTATTGGAAGATGAAAAACACGAAGGAAAG ..:..x.xx...x:.....:..::x:.:....:x...x:::x.:.xxx....x...x........---------.........:x..........:x:xx.xx.:....x:..:..x.x...:..... 65M9D54M 78/119 65.5% 119/94230402 0.0% 9/119 7.6% 131862986 58351569 +4090 chr4 + 190214555 189898043 189898042 189898170 128 AAAGAAAGAGAAAGAAAGAAAAGAAAGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGGGAGAAAG chr4 - 94230402 30533164 30533163 30533286 63697117 63697116 63697239 123 AAATAAAAAGGAAGAAAGAAAAGAGGGGAGAGAAAGACTGTGAAAAAGTAAAGGCTCAAGACAAAGACCGAAATA-----GAAGAATGAGGAAAAAAAGAGAAAACACCGGAAAGGAGAGGAATAAAG ...x...:..:.............::.:.::......xx.x:.:...:x...:.xxx:.:.x.....xx....x.-----:.....x:..:..:...::.::...x.xx.::..:..:...:.x.... 75M5D48M 80/123 65.0% 123/94230402 0.0% 5/123 4.1% 159364879 30849676 +3046 chr4 + 190214555 189898066 189898065 189898166 101 AAAGAAAGGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGGGAG chr4 - 94230402 28816821 28816820 28816921 65413482 65413481 65413582 101 AATGGTAGGAAAAAAAGAATGAAAAGCTGACAGAGATAAAAAGAAAGAAAAGAACACATGGAGCTGTTATGAAGCCATGAAAGAAAGAAATCAAAGCAGAG ..x.:x......:......x......xx:.x.:...x.:...........::..x.x.x:..:xx:xx.x...:xx.x..........:.xx:..:x:... 101M 65/101 64.4% 101/94230402 0.0% 0/101 0.0% 161081245 29133310 +3991 chr4 + 190214555 189946201 189946200 189946286 86 TGATCGTTT-AGTACAGGTGTATTCAATCTTTTAGCTTCCCTGGGCCACAATGAAAGGAGAGGAATTGTCTTGGGCCACACATAAAA chr4 - 94230402 9885843 9885842 9885929 84344474 84344473 84344560 87 TGATTGCTTGAATTCAGGACTATCCAACCTTCTGTCTTCCCTGAGCCACAATGAGTGAATAGGAATTACCTAGGGCTGCATCTAAGA ....:.:..-.:.x....xx...:...:...:.:x........:..........:x.:.x.......::..x....::..:x...:. 9M1I77M 62/86 72.1% 87/94230402 0.0% 1/86 1.2% 180060358 10154197 +3466 chr4 + 190214555 190010480 190010479 190010584 105 CAGGCT---GGCATGCAGTGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCCGGTTCGAGTGATTCACCTGCCTCAGCCTCCCAACTAGCTGGGATTACAGGTGC chr4 - 94230402 18197091 18197090 18197197 76033206 76033205 76033312 107 CAGGCTTAGGGCACACATCTGCTTGGCATCATGTT-CTACAGCCCAAAGCTTCTGGGTTCAAGTGCTTCACAGGGCTCAGCCTTTCAAGTAGCTGGAACTACACGTGC ......---....::..x:x..x..::x...xx.:-..:..:..:xx:x..:.:x.....:....x.....xx.x........::...x.......:.:....x.... 6M3I26M1D72M 71/104 68.3% 107/94230402 0.0% 4/104 3.8% 171813389 18401166 +3393 chr4 + 190214555 190019694 190019693 190019835 142 CTCCCTCGCCCGCTCCCTTTCTCTACTTCCCTCTCCACCTTGCCCGCTCTCCTCCCTCTCTCTCTCTCTCTCTCTCT-CGCTGTTTCT-CTCTCTCCTTCCGTTTCTATCTTTCCATCCCTCTGTC-CTTTGCTTTTCTTCAAGC chr4 - 94230402 43081888 43081887 43082030 51148373 51148372 51148515 143 CTCCCCGGCACGCTCCCTTCCTTCA--TGCTTCAAAATGCTGTCCCTCCTTTTCCTTTTTTTTCTCTCACCCTCCGTGTTCCATTTCGATTCTGAACTTCTGTTTCTTTCTCTCTCTCTCTCTGTAGCTTCTTCTTTCTGTAAAC .....:x..x.........:..::.--.x.:..xxx.:x:..:..x::..::...:.:.:.:......x.:...:x.-:x.::....x-:...xxx....:......x...:..:x..:......x-...:x::.....x:..:. 25M2D50M1I10M1I37M1I18M 89/140 63.6% 143/94230402 0.0% 5/140 3.6% 146937806 43276749 +3046 chr4 + 190214555 190080775 190080774 190080846 72 CTCTCCGGCCCCACCAC-----CACCACCGCCACCACGCCCTCCCCCCCCACCCCCCCCCCCCACCACCACCACCAC chr4 - 94230402 85088290 85088289 85088366 9142037 9142036 9142113 77 CTCTCCCGGCTCCGCACGCGTGCGGCCCCGCTCCCCTCCGCTGCCCCCCCAACCCCCCCTACCACCACCACCACCAC ......x.x.:.xx...-----.:x.x....:x..x:x.x..x........x.......:x................ 17M5I55M 54/72 75.0% 77/94230402 0.0% 5/72 6.9% 104992485 85222070 +3176 chr4 + 190214555 190102566 190102565 190102606 41 TCTCACCTCCGTTGGCAAAAAACAAACAAACAAACAAAAAA chr4 - 94230402 80284921 80284920 80284961 13945442 13945441 13945482 41 TCTCTCCCCCTTTGGTAAAAAACAAACAAACAAACAAAAAA ....x..:..x....:......................... 41M 37/41 90.2% 41/94230402 0.0% 0/41 0.0% 109817645 80396910 +3217 chr4 + 190214555 190173429 190173428 190173504 76 CCGGCCCCACCACCACCACCGCCACCACGCCCTCCCCCACCACCCCCCCCCCCACCACCACCACCACCACCACCAC chr4 - 94230402 85088295 85088294 85088366 9142037 9142036 9142108 72 CCGGCTCCGC----ACGCGTGCGGCCCCGCTCCCCTCCGCTGCCCCCCCAACCCCCCCTACCACCACCACCACCAC .....:..:.----..xxx:..x:..x...:.:..:..:.::.......xx..x..x.:................. 10M4D62M 52/72 72.2% 72/94230402 0.0% 4/72 5.6% 105085134 85129421